Modified sequence Experiment N duplicates Sequence Length Missed cleavages Proteins Leading proteins Gene names Protein names Phospho (STY) All Phospho (STY) Probabilities Max Score Min PEP Intensity Reporter intensity corrected 1 Reporter intensity corrected 2 Reporter intensity corrected 3 Reporter intensity corrected 4 Reporter intensity corrected 5 Reporter intensity corrected 6 Reporter intensity corrected 7 Reporter intensity corrected 8 Reporter intensity corrected 9 Reporter intensity corrected 10 Phosphoproteome Fullproteome TMT Channel Normal 1 TMT Channel Normal 2 TMT Channel Normal 3 TMT Channel Normal 4 TMT Channel Normal 5 TMT Channel Normal 6 TMT Channel Normal 7 TMT Channel Normal 8 TMT Channel Normal 9 TMT Channel Normal 10 TMT Channel Ratio 1 TMT Channel Ratio 2 TMT Channel Ratio 3 TMT Channel Ratio 4 TMT Channel Ratio 5 TMT Channel Ratio 6 TMT Channel Ratio 7 TMT Channel Ratio 8 TMT Channel Ratio 9 TMT Channel Ratio 10 Curve signal Log EC50 Curve slope Curve top Curve bottom R2 Curve RMSE Log EC50 error Curve slope error Curve top error Curve bottom error EC50 pEC50 Curve effect size Regulation (ac)AAAAAAAGDS(ph)DSWDADAFSVEDPVRK ddPTM_KYSE-520_SHP099_60min_R1 13 AAAAAAAGDSDSWDADAFSVEDPVRK 26 1 O75822-3;O75822;O75822-2 O75822-3 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 AAAAAAAGDS(0.5)DS(0.5)WDADAFSVEDPVRK;AAAAAAAGDS(0.831)DS(0.169)WDADAFSVEDPVRK;AAAAAAAGDS(0.5)DS(0.5)WDADAFS(0.001)VEDPVRK;AAAAAAAGDS(0.5)DS(0.5)WDADAFSVEDPVRK;AAAAAAAGDS(0.911)DS(0.089)WDADAFSVEDPVRK;AAAAAAAGDS(0.843)DS(0.157)WDADAFSVEDPVRK;AAAAAAAGDS(0.8)DS(0.2)WDADAFSVEDPVRK;AAAAAAAGDS(0.5)DS(0.5)WDADAFSVEDPVRK;AAAAAAAGDS(0.5)DS(0.5)WDADAFSVEDPVRK;AAAAAAAGDS(0.848)DS(0.152)WDADAFSVEDPVRK;AAAAAAAGDS(0.826)DS(0.174)WDADAFSVEDPVRK;AAAAAAAGDS(0.865)DS(0.135)WDADAFSVEDPVRK;AAAAAAAGDS(0.822)DS(0.178)WDADAFSVEDPVRK 122.41 2.8516e-16 7706436000.0 3657876.0 3966627.0 3548781.0 2782980.0 3159739.0 3423663.0 3163820.0 3201381.0 4453833.0 3461886.0 True False 3454966.3264849707 3776064.2848914843 3777541.10151036 3047473.5824665525 3408392.4828443625 3402294.649273696 3483649.8015076267 3190276.1565189436 3645129.1991931982 3431216.3833465525 1.0069217270160193 1.1005031053181766 1.1009335114639516 0.8881612938366406 0.9933481605494291 0.9915709967423715 1.0152812916187859 0.9297799381009559 1.0623431436399273 1.0 21.710288678996314 -5.229496449153082 24.999705437306805 0.9821430945442465 1.0725578245144127 0.380606326533087 0.05052939809541888 653.9211269890594 511781.8583225765 0.013192951530915075 0.022848131764706216 5.895267970918565e-06 5.229496449153082 0.0904147299701662 (ac)AAAAPDSRVS(ph)EEENLKK ddPTM_KYSE-520_SHP099_60min_R1 3 AAAAPDSRVSEEENLKK 17 2 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 AAAAPDS(0.043)RVS(0.957)EEENLKK;AAAAPDS(0.19)RVS(0.81)EEENLKK;AAAAPDS(0.005)RVS(0.995)EEENLKK 139.98 4.3111e-18 2166870000.0 1260480.0 1379830.0 1034870.0 1001130.0 1066510.0 1375780.0 1071290.0 1231960.0 1542780.0 1320410.0 True False 1190558.661695416 1313540.8956329457 1101579.3760505444 1096277.0941992907 1150438.2693881795 1367193.2467003202 1179586.4479828537 1227686.618301627 1262650.0423188936 1308712.1946634348 0.909717710700782 1.0036896584208514 0.8417277538502961 0.8376762275690596 0.8790613200360993 1.0446859533175856 0.9013337331102133 0.9380875514935922 0.9648034514140161 1.0 20.319716431325066 (ac)AAASVT(ph)PPGS(ph)LELLQPGFSK ddPTM_KYSE-520_SHP099_60min_R1 8 AAASVTPPGSLELLQPGFSK 20 0 B1AMY1;B1AMX7;B1AMX8;Q12933-4;Q12933-3;Q12933;Q12933-2 B1AMY1 TRAF2 TNF receptor-associated factor 2 2 AAAS(0.09)VT(0.918)PPGS(0.991)LELLQPGFSK;AAAS(0.122)VT(0.892)PPGS(0.986)LELLQPGFSK;AAAS(0.122)VT(0.892)PPGS(0.986)LELLQPGFSK;AAAS(0.02)VT(0.984)PPGS(0.996)LELLQPGFSK;AAAS(0.123)VT(0.896)PPGS(0.981)LELLQPGFSK;AAAS(0.203)VT(0.833)PPGS(0.964)LELLQPGFSK;AAAS(0.241)VT(0.839)PPGS(0.92)LELLQPGFSK;AAAS(0.166)VT(0.859)PPGS(0.975)LELLQPGFSK 94.551 2.3349e-11 1544479000.0 1300006.0 1243247.0 1271412.0 1116635.0 1153856.0 1156964.0 1139960.0 1228393.0 1518980.0 1131056.0 True False 1227892.0756822883 1183519.5479682083 1353369.251851127 1222759.654671444 1244657.9026574213 1149742.9585219955 1255198.2817374696 1224131.9913920825 1243171.5223697175 1121035.7237882514 1.0953193101937406 1.0557375852116548 1.2072489958462378 1.0907410252185745 1.1102749682690045 1.0256077787037288 1.1196773261567887 1.0919651938079582 1.1089490691418287 1.0 20.096400822231974 -6.042478535372025 24.867571205174457 1.0770068472471437 1.113196507825374 0.14698187310213728 0.049606438490588406 1061.7583989220338 621566.475001934 0.01616969582073086 0.016171074413273298 9.068207823067669e-07 6.042478535372025 0.036189660578230365 (ac)AADVSVTHRPPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 AADVSVTHRPPLSPK 15 1 A0A087WZ13;Q8IY67-2;Q8IY67;Q8IY67-3 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 AADVSVT(0.001)HRPPLS(0.999)PK;AADVSVTHRPPLS(1)PK;AADVSVT(0.012)HRPPLS(0.988)PK;AADVSVT(0.001)HRPPLS(0.999)PK;AADVSVT(0.001)HRPPLS(0.999)PK;AADVSVT(0.001)HRPPLS(0.999)PK;AADVSVT(0.001)HRPPLS(0.999)PK 97.271 2.3064e-11 10356500000.0 5426500.0 6880870.0 6276410.0 11271620.0 5258060.0 5648090.0 5176370.0 5829980.0 7481400.0 5962060.0 True False 5125481.227540438 6550302.676803569 6680997.431211067 12342871.375863865 5671839.407731016 5612838.175257395 5699647.996102826 5809757.160107563 6122966.350746419 5909240.786812487 0.8673671309821819 1.108484645171631 1.1306016580202471 2.0887406387990075 0.9598254009869975 0.949840830277797 0.9645313504270456 0.9831647363351754 1.03616802422587 1.0 22.494541355655926 (ac)AAGGDHGS(ph)PDSYR ddPTM_KYSE-520_SHP099_60min_R1 3 AAGGDHGSPDSYR 13 0 B4DEP1;A0A1W2PRX2;A0A096LP72;A0A096LNY4;A0A096LNY5;A0A1B0GTG9;A0A1B0GWF8;A0A1B0GWJ0;A0A1B0GTJ7;A0A0A6YY92;P30566-2;P30566 B4DEP1 ADSL Adenylosuccinate lyase 1 AAGGDHGS(0.977)PDS(0.023)YR;AAGGDHGS(0.986)PDS(0.012)Y(0.002)R;AAGGDHGS(0.971)PDS(0.029)YR 90.229 3.2361999999999996e-11 1332140000.0 444222.0 420046.0 426006.0 366147.0 418817.0 461066.0 418036.0 449730.0 507220.0 480391.0 True False 419580.12012539717 399866.35965810023 453467.0283937003 400945.5007938908 451775.51515724143 458188.3160702516 460295.1585181975 448169.99159777066 415121.6339756737 476135.1094785423 0.8812207118792742 0.8398170008845374 0.9523914942763456 0.8420834607912063 0.9488389034197053 0.9623073513147438 0.9667322349370696 0.9412664234918556 0.8718568022221889 1.0 18.861011489390766 -5.784147960742502 24.82002563820676 0.9471655853767958 0.8813390392235346 0.3996075945702211 0.04174465628109691 231.0346996430102 252515.0339695046 0.012719965219494684 0.014433620484729017 1.6438115940161177e-06 5.784147960742502 -0.06582654615326122 (ac)AARDS(ph)DS(ph)EEDLVSYGTGLEPLEEGERPK ddPTM_KYSE-520_SHP099_60min_R1 6 AARDSDSEEDLVSYGTGLEPLEEGERPK 28 2 K7EQ19;Q9BRR8 K7EQ19 GPATCH1 G patch domain-containing protein 1 2 AARDS(0.999)DS(0.944)EEDLVS(0.057)YGTGLEPLEEGERPK;AARDS(1)DS(1)EEDLVSYGTGLEPLEEGERPK;AARDS(0.977)DS(0.981)EEDLVS(0.042)YGTGLEPLEEGERPK;AARDS(1)DS(1)EEDLVSYGTGLEPLEEGERPK;AARDS(0.998)DS(0.708)EEDLVS(0.293)YGT(0.002)GLEPLEEGERPK;AARDS(1)DS(1)EEDLVSYGTGLEPLEEGERPK 145.86 4.4951999999999995e-23 4957840000.0 1941610.0 1796090.0 1740940.0 1612210.0 1663620.0 1546890.0 1569320.0 1743200.0 2260890.0 1700380.0 True False 1833905.0227964218 1709803.1404139488 1853163.7780024894 1765433.9536713895 1794537.4292970207 1537235.2857202874 1727962.1806872562 1737153.2460659377 1850369.36839884 1685315.9560756215 1.0881668901223724 1.0145297291288617 1.099594275673811 1.0475388589937333 1.0648077132526113 0.912134772223868 1.0253045872246647 1.0307582028185522 1.09793618325881 1.0 20.684587656596214 (ac)AASAAAASAAAASAASGS(ph)PGPGEGSAGGEKR ddPTM_KYSE-520_SHP099_60min_R1 8 AASAAAASAAAASAASGSPGPGEGSAGGEKR 31 1 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 AASAAAASAAAASAAS(0.048)GS(0.949)PGPGEGS(0.003)AGGEKR;AASAAAASAAAASAAS(0.05)GS(0.937)PGPGEGS(0.012)AGGEKR;AASAAAASAAAASAAS(0.019)GS(0.98)PGPGEGS(0.001)AGGEKR;AASAAAASAAAASAAS(0.027)GS(0.971)PGPGEGS(0.002)AGGEKR;AASAAAASAAAASAAS(0.005)GS(0.99)PGPGEGS(0.005)AGGEKR;AASAAAASAAAASAAS(0.001)GS(0.999)PGPGEGSAGGEKR;AASAAAASAAAASAAS(0.001)GS(0.999)PGPGEGS(0.001)AGGEKR;AASAAAASAAAASAAS(0.028)GS(0.96)PGPGEGS(0.011)AGGEKR 166.07 1.9440000000000002e-51 6247790000.0 3817530.0 4969360.0 4236510.0 3662270.0 3673430.0 4705250.0 3349869.0 4370360.0 5765830.0 4090390.0 True False 3605764.0008426197 4730624.486438573 4509602.213255663 4010331.0396983745 3962508.0420423835 4675882.78942613 3688506.450090892 4355200.241209694 4718900.6167461 4054152.326875268 0.8894002272533644 1.1668590879229974 1.1123415820765257 0.9891910111797233 0.977394957701671 1.1533564633053786 0.9098095366667692 1.0742566855070437 1.1639672701650028 1.0 21.950968865602825 -7.511183942304514 24.909967310322152 1.094359758526869 1.0349381421659274 0.049899632734449306 0.09664821135951977 1599.755623691974 3407519.112911925 0.055609805764538514 0.02435773877248908 3.0818823646714565e-08 7.511183942304514 -0.059421616360941565 (ac)ADANS(ph)PPKPLSKPR ddPTM_KYSE-520_SHP099_60min_R1 2 ADANSPPKPLSKPR 14 2 K7ENQ6;K7ERQ1;K7ELB1;K7EKC3 K7ENQ6 DNMT1 1 ADANS(0.993)PPKPLS(0.007)KPR;ADANS(0.997)PPKPLS(0.003)KPR 56.851000000000006 0.0022572 5103900000.0 1731410.0 1881250.0 1607630.0 1297410.0 1401720.0 1712840.0 1531530.0 1841420.0 2069690.0 1812820.0 True False 1635365.2358197342 1790871.926186181 1711260.4020989458 1420715.456319461 1512027.3893041795 1702149.5302142643 1686351.9986923998 1835032.5438106607 1693886.468639075 1796759.8251526188 0.9101746448949148 0.996723046183461 0.9524146622955516 0.7907097189234983 0.8415300521179819 0.9473439390095901 0.9385517057346043 1.021300965283321 0.9427450708361617 1.0 20.77696614443876 -6.809066870690118 2.2580363224219426 0.9846251025817335 0.9019432957858178 0.29110989689516376 0.057213513427665154 0.45260279163826433 4.709556436365482 0.031623681733528766 0.019962174322509026 1.552147998864486e-07 6.809066870690118 -0.08268180679591575 (ac)ADESETAVKPPAPPLPQMMEGNGNGHEHCS(ph)DCENEEDNSYNR ddPTM_KYSE-520_SHP099_60min_R1 1 ADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNR 42 1 P30419;B7Z8J4 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 ADESETAVKPPAPPLPQMMEGNGNGHEHCS(0.64)DCENEEDNS(0.291)Y(0.069)NR 40.655 0.00014205 625960000.0 29257.0 47245.0 20489.0 32375.0 27517.0 31112.0 26113.0 26813.0 34412.0 33222.0 True False 27634.055887616454 44975.27928380922 21809.753723559104 35451.91026610134 29682.431349686845 30917.81846758957 28752.75687832075 26719.991961201256 28163.64825592616 32927.67892632487 0.8392348561660599 1.36588064358987 0.6623532066246778 1.0766598625255182 0.90144317235663 0.9389613685424858 0.8732093428952147 0.8114751125029732 0.8553183575113766 1.0 15.007013199423815 -4.767125151198702 24.99998825295774 0.8914289671430617 1.1025577320536586 0.22602886174185377 0.15736586243320466 169.97871432648557 747398.807289173 0.03789801957793141 0.0825158804704494 1.7095226087757377e-05 4.767125151198702 0.21112876491059684 (ac)ADGDS(ph)GS(ph)ERGGGGGPCGFQPASR ddPTM_KYSE-520_SHP099_60min_R1 1 ADGDSGSERGGGGGPCGFQPASR 23 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 2 ADGDS(1)GS(1)ERGGGGGPCGFQPASR 46.926 0.0032492 0.0 24271.0 31533.0 28522.0 22127.0 29195.0 28506.0 18696.0 22088.0 33408.0 27753.0 True False 22924.639246961036 30018.107348002035 30360.573756813556 24229.94342727488 31492.480403172856 28328.0834802362 20585.97413537643 22011.38188337794 27341.949347145808 27507.13001150728 0.8334071652466392 1.0912845991364535 1.1037346951176865 0.8808604684363135 1.1448842678243187 1.0298451153713777 0.7483868410395608 0.8002064146339418 0.9939949873253817 1.0 14.747518001785862 -6.72850777609092 24.84525029297198 0.8689975484415596 1.02149159305716 0.22116965522885246 0.11582252870887716 226.78871550494586 171100.40217410665 0.043433718365167816 0.0336412204189376 1.868496221324028e-07 6.72850777609092 0.15249404461560034 (ac)ADHSFS(ph)DGVPSDSVEAAK ddPTM_KYSE-520_SHP099_60min_R1 3 ADHSFSDGVPSDSVEAAK 18 0 Q99733;Q99733-2;E9PNJ7;C9J6D1;C9JZI7;E9PS34;E9PKT8;E9PNW0;E9PJJ2;E9PKI2;E9PP22;C9J1B1 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 1 ADHS(0.058)FS(0.938)DGVPS(0.004)DS(0.001)VEAAK;ADHS(0.133)FS(0.862)DGVPS(0.004)DS(0.001)VEAAK;ADHS(0.1)FS(0.898)DGVPS(0.002)DSVEAAK 88.19 1.1943999999999999e-71 1691590000.0 1539230.0 1650450.0 1368720.0 1297570.0 1367980.0 1524260.0 1328960.0 1496630.0 1840800.0 1545730.0 True False 1453845.8435210688 1571159.9046240456 1456949.8812294318 1420890.6626713558 1475632.243258519 1514746.5279444603 1463304.2461997154 1491438.5398460687 1506557.1227917266 1532036.0347597438 0.9489632166185067 1.0255371733932075 0.9509893032365344 0.9274525079262786 0.9631837696885047 0.9887146865850353 0.9551369634913274 0.9735009529850637 0.9833692475960509 1.0 20.5470188003715 -7.955332397956782 1.8552179853839266 0.9997717571100896 0.9666190508255107 0.1583047276832562 0.024921343098405362 0.680916074657099 5.289620547140314 0.02452237984568334 0.0069895587494248745 1.1083262058472348e-08 7.955332397956782 -0.03315270628457889 (ac)ADILSQSETLASQDLSGDFKKPALPVS(ph)PAAR ddPTM_KYSE-520_SHP099_60min_R1 1 ADILSQSETLASQDLSGDFKKPALPVSPAAR 31 2 A0A087X0M4;A0A087WWF4 A0A087X0M4 SLC4A1AP 1 ADILSQSETLASQDLSGDFKKPALPVS(1)PAAR 164.8 6.829200000000001e-43 160410000.0 116730.0 197620.0 145670.0 80608.0 92046.0 118820.0 57569.0 86213.0 196160.0 113940.0 True False 110254.75420451399 188126.03856633237 155060.1212802409 88268.96008432112 99289.49652990075 118078.4003059588 63388.63633929639 85913.94722526536 160542.28879119147 112930.58024397874 0.9763055672459682 1.6658555916377922 1.3730569784131472 0.7816214163924609 0.8792082385071663 1.0455839335179058 0.5613062130943595 0.7607677835326286 1.4216015577388421 1.0 16.78507667793028 -5.25226312114412 23.86283869479715 0.8998805658035978 1.3711510946375913 0.3405072809240597 0.26355285996415767 360.0696010025769 936355.138624242 0.07073873185265171 0.12019542180235276 5.594185701258303e-06 5.25226312114412 0.47127052883399356 (ac)ADKPDMGEIAS(ph)FDK ddPTM_KYSE-520_SHP099_60min_R1 5 ADKPDMGEIASFDK 14 1 P63313 P63313 TMSB10 Thymosin beta-10 1 ADKPDMGEIAS(1)FDK;ADKPDMGEIAS(1)FDK;ADKPDMGEIAS(1)FDK;ADKPDMGEIAS(1)FDK;ADKPDMGEIAS(1)FDK 93.90899999999999 1.0408999999999999e-08 1231090000.0 3160680.0 2973540.0 2402010.0 2329270.0 2384990.0 2882640.0 2604080.0 3319980.0 3096040.0 2992730.0 True False 2985350.779740628 2830686.675025465 2556847.4079518826 2550643.120479436 2572675.1442631716 2864648.374498987 2867325.819771666 3308463.7642691596 2533877.1808170895 2966216.74050871 1.0064506544550875 0.9543087787104858 0.8619894065844224 0.8598977565078395 0.8673254078600994 0.9657582790149368 0.9666609255532406 1.1153816641536969 0.8542454589419269 1.0 21.50019258823361 -6.491094898481403 3.6851519135888675 0.9920467831351238 0.907104335248737 0.18710387781872362 0.07281301159969694 0.36745619464289936 10.549641581864057 0.028252224995964338 0.023232223206216436 3.227788734628905e-07 6.491094898481403 -0.08494244788638683 (ac)ADKPDMGEIASFDK ddPTM_KYSE-520_SHP099_60min_R1 6 ADKPDMGEIASFDK 14 1 P63313 P63313 TMSB10 Thymosin beta-10 0 ;;;;; 107.85 1.4577e-11 7030390000.0 6768500.0 7837740.0 19488500.0 4320540.0 9038380.0 8079710.0 6546580.0 6534340.0 13256120.0 9362830.0 False True 6393037.812329759 7461203.205712409 20744759.8927025 4731162.822582282 9749649.084652489 8029281.532873753 7208372.194863756 6511673.899666423 10849142.767591197 9279882.610371506 0.6889136512551017 0.8040191367694155 2.2354549905100596 0.5098300292392252 1.0506220276704747 0.8652352481161735 0.7767740711296757 0.7016978741076703 1.169103449160643 1.0 23.145675124838007 (ac)ADLSLADALTEPS(ph)PDIEGEIKR ddPTM_KYSE-520_SHP099_60min_R1 2 ADLSLADALTEPSPDIEGEIKR 22 1 E7EVA0;A0A0J9YW37;A0A0J9YVV8;P27816-7;P27816-6;P27816;P27816-2;P27816-5;H7C456 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ADLSLADALT(0.006)EPS(0.993)PDIEGEIKR;ADLSLADALT(0.016)EPS(0.983)PDIEGEIKR 43.494 3.3708e-07 75123000.0 134544.0 211867.0 152614.0 116552.0 136182.0 185095.0 123086.0 166481.0 212509.0 200996.0 True False 127080.57611318551 201688.59130114957 162451.74263103365 127629.06703736358 146898.74863041253 183939.75344749587 135528.73408359778 165903.51626795752 173922.7225159425 199215.3318125219 0.6379056017273752 1.0124150057434094 0.8154580330389137 0.6406588583125373 0.7373867628253452 0.9233212713798473 0.6803127693562336 0.832784880352916 0.8730388416069209 1.0 17.60396915737853 -8.033046389209215 1.8757935132298373 0.9985195101458942 0.7865852620317471 0.26170475938381155 0.11351639723116379 0.5451670069991579 4.351907803988488 0.10795114424226113 0.030514692677743482 9.267308292447148e-09 8.033046389209215 -0.21193424811414718 (ac)ADMEDLFGS(ph)DADS(ph)EAER ddPTM_KYSE-520_SHP099_60min_R1 2 ADMEDLFGSDADSEAER 17 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 2 ADMEDLFGS(1)DADS(1)EAER;ADMEDLFGS(1)DADS(1)EAER 52.185 3.4639e-05 80650000.0 84922.0 67853.0 74929.0 73332.0 82266.0 55389.0 60595.0 59041.0 86502.0 77381.0 True False 80211.20737218997 64593.24003057066 79759.04323063882 80301.45123193017 88739.86617048876 55043.296705493696 66720.53395021048 58836.20055127301 70795.41733796713 76695.46454150701 1.045840296446477 0.8422041696561247 1.0399447178193155 1.0470169482899687 1.15704190203403 0.7176864633984279 0.8699410629959979 0.7671405460935867 0.9230717586911958 1.0 16.22685364467083 -6.264353900696085 24.999983895101373 0.8419125730310653 1.0180727725642011 0.4040912164189455 0.10281849094001617 265.2772777106631 2275468.4219846358 0.03532289898471313 0.03250280383555885 5.440591257359245e-07 6.264353900696085 0.17616019953313589 (ac)AEPPS(ph)PVHCVAAAAPTATVSEKEPFGK ddPTM_KYSE-520_SHP099_60min_R1 4 AEPPSPVHCVAAAAPTATVSEKEPFGK 27 1 Q6PCB5 Q6PCB5 RSBN1L Round spermatid basic protein 1-like protein 1 AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK;AEPPS(1)PVHCVAAAAPTATVSEKEPFGK 94.08 2.1552e-06 18591800000.0 6439920.0 8929650.0 6606590.0 5566320.0 5756990.0 8608780.0 5938910.0 7640830.0 9305810.0 7795130.0 True False 6082684.799937762 8500656.210322091 7032461.362317754 6095341.37922486 6210032.360207649 8555049.410755197 6539272.980976056 7614325.744113123 7616109.484379875 7726071.212719367 0.7872933904523024 1.10025600027185 0.9102247660803684 0.7889315554314527 0.8037762258758532 1.1072962150117243 0.8463904617149406 0.9855365727897669 0.9857674456639147 1.0 22.88130354455951 -6.240008180680571 24.98454588370483 0.9754312251429175 0.8872699082445533 0.20501479750779383 0.10362404298690567 1678.1159119055148 1956353.0702650775 0.03509761167343739 0.03506416803836619 5.7542909804222e-07 6.240008180680571 -0.08816131689836415 (ac)AFS(ph)PWQILS(ph)PVQWAK ddPTM_KYSE-520_SHP099_60min_R1 1 AFSPWQILSPVQWAK 15 0 O75410;O75410-9;O75410-2;O75410-6;O75410-10;E5RJG6 O75410 TACC1 Transforming acidic coiled-coil-containing protein 1 2 AFS(1)PWQILS(1)PVQWAK 69.34899999999999 0.00011815 0.0 13471.0 15276.0 15783.0 13333.0 16471.0 11892.0 13898.0 14822.0 19818.0 13481.0 True False 12723.736776227264 14542.118030256523 16800.397433692877 14600.164311287383 17767.173992829612 11817.777616886575 15302.94547140894 14770.585941480815 16219.550771124746 13361.568828059299 0.9522636854968268 1.088354086064959 1.2573671288069135 1.092698357443404 1.3297221472615208 0.8844603331361238 1.1452955613470142 1.1054529697487754 1.2138956869393724 1.0 13.705801789126582 -10.160305844548795 4.841576929597989 0.999989597993777 1.1209376603691903 0.07427417591454544 0.12566217535601676 1.3678881831261036e-05 2.372367009934536e-06 0.11795928066145442 0.028606867580043747 6.913439321649552e-11 10.160305844548795 0.12094806237541333 (ac)AGS(ph)PELVVLDPPWDKELAAGTESQALVSATPR ddPTM_KYSE-520_SHP099_60min_R1 1 AGSPELVVLDPPWDKELAAGTESQALVSATPR 32 1 Q5SY74;Q96IY1-2;Q96IY1 Q5SY74 NSL1 Kinetochore-associated protein NSL1 homolog 1 AGS(1)PELVVLDPPWDKELAAGTESQALVSATPR 56.663000000000004 1.0678e-10 30424000.0 19058.0 28401.0 26270.0 15549.0 16860.0 27815.0 13939.0 20311.0 28463.0 23953.0 True False 18000.814748818884 27036.573329229886 27963.406233486137 17026.77228502268 18186.78607972237 27641.396267549644 15348.09015153038 20240.545881623046 23294.836693840134 23740.795055152023 0.7582229115327165 1.138823416251287 1.1778630904535676 0.7171946956901797 0.7660563194060188 1.1642995191751655 0.6464859376392144 0.8525639446616012 0.9812155254162345 1.0 14.53508062973224 -5.259691997359513 24.998194801719603 0.8672022336162154 1.0363551580384958 0.1300705922430353 0.1756261965034202 291.50603130196953 4170279.7989408993 0.04811406640209288 0.07812334414334952 5.499307477364191e-06 5.259691997359513 0.16915292442228036 (ac)AHEHGHEHGHHK ddPTM_KYSE-520_SHP099_60min_R1 6 AHEHGHEHGHHK 12 0 C9JKQ2;O43676 C9JKQ2 NDUFB3 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 0 ;;;;; 107.85 5.971100000000001e-11 409489000.0 63335.0 101614.8 111129.2 218799.1 111342.90000000001 64602.719999999994 149233.3 143211.2 245308.1 15863.269999999999 False True 59821.681294807655 96733.07248107567 118292.76604500691 239593.70067965184 120104.95277555876 64199.510461317754 164319.2583406543 142714.43377294528 200766.33275396825 15722.733769237302 3.8047887964530203 6.152433406354633 7.523676720676623 15.238679494047958 7.638935730792125 4.083228235214977 10.451061548988202 9.07694780485164 12.769174604150743 1.0 13.940564465620731 (ac)AHS(ph)PVAVQVPGMQNNIADPEELFTK ddPTM_KYSE-520_SHP099_60min_R1 13 AHSPVAVQVPGMQNNIADPEELFTK 25 0 Q8NBY1;B4E0Y9;Q9P289-3;Q9P289 Q8NBY1 STK26 Serine/threonine-protein kinase 26 1 AHS(1)PVAVQVPGMQNNIADPEELFTK;AHS(1)PVAVQVPGMQNNIADPEELFTK;AHS(1)PVAVQVPGMQNNIADPEELFTK;AHS(1)PVAVQVPGMQNNIADPEELFTK;AHS(1)PVAVQVPGMQNNIADPEELFTK;AHS(1)PVAVQVPGMQNNIADPEELFTK;AHS(1)PVAVQVPGMQNNIADPEELFTK;AHS(1)PVAVQVPGMQNNIADPEELFTK;AHS(1)PVAVQVPGMQNNIADPEELFTK;AHS(1)PVAVQVPGMQNNIADPEELFTK;AHS(1)PVAVQVPGMQNNIADPEELFTK;AHS(1)PVAVQVPGMQNNIADPEELFTK;AHS(1)PVAVQVPGMQNNIADPEELFTK 87.509 1.1421e-15 1824872000.0 1209667.0 1723925.0 1182855.0 1042561.0 1212132.0 1698914.0 1171553.0 1594013.0 1838646.0 1717191.0 True False 1142564.360098621 1641105.0553358183 1259103.7259349162 1141645.6839826053 1307519.8923123404 1688310.4475458479 1289985.0104954364 1588483.7409484312 1504794.2348938049 1701978.0236943811 0.6713155776350893 0.964233986860518 0.7397884745902039 0.6707758079651956 0.7682354731432934 0.9919695930509926 0.7579328243588854 0.9333162466460085 0.8841443390834381 1.0 20.698780978080233 -6.228029942368359 22.786611025647016 0.89958361126986 0.767658029748725 0.3617318531685566 0.09906917640221025 281.69708584441184 192128.35040454258 0.032403833994662984 0.032400076208659936 5.915208504526596e-07 6.228029942368359 -0.13192558152113498 (ac)AHS(ph)PVQSGLPGMQNLK ddPTM_KYSE-520_SHP099_60min_R1 16 AHSPVQSGLPGMQNLK 16 0 B4DR80;Q9Y6E0-2 B4DR80 STK24 1 AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(0.908)PVQS(0.092)GLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(0.986)PVQS(0.014)GLPGMQNLK;AHS(0.999)PVQS(0.001)GLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(0.999)PVQS(0.001)GLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(1)PVQSGLPGMQNLK;AHS(0.99)PVQS(0.01)GLPGMQNLK 156.51 8.0017e-37 19309230000.0 7735628.0 10190121.0 7094900.0 6481309.0 6642758.0 9098962.0 6604046.0 8450046.0 10096400.0 9230062.0 True False 7306517.294247892 9700572.29147655 7552248.606241374 7097290.6586833885 7165505.26247713 9042172.00306943 7271647.41895786 8420734.762681553 8263148.269531927 9148290.831559572 0.7986756683600427 1.060369906257432 0.8255365669167177 0.775805097297444 0.7832616380928477 0.9884001470390452 0.7948640410372931 0.9204708199297609 0.9032450346928084 1.0 23.125070800244206 -8.190637619911017 1.0687930177070328 0.9994058816328965 0.8656304377536118 0.1720320489376579 0.08991663279537368 1.4729585121484083 3.4199737479533283 0.08664914715018156 0.02781068285223677 6.447069917414539e-09 8.190637619911017 -0.13377544387928464 (ac)AKPCGVRLS(ph)GEAR ddPTM_KYSE-520_SHP099_60min_R1 3 AKPCGVRLSGEAR 13 2 A0A087X1Z3;Q9UL46;H0YM70;H0YLG1;H0YLD2 A0A087X1Z3 PSME2 Proteasome activator complex subunit 2 1 AKPCGVRLS(1)GEAR;AKPCGVRLS(1)GEAR;AKPCGVRLS(1)GEAR 56.339 1.3464e-06 8914600000.0 7952900.0 7892700.0 7996400.0 6133800.0 7070500.0 6986800.0 6091600.0 6484800.0 9460200.0 6696900.0 True False 7511736.7832868965 7513522.844815766 8511860.738692371 6716754.507805776 7626908.124358074 6943192.78957814 6707398.376286852 6462305.742363703 7742466.152235064 6637570.676109355 1.1316997060873388 1.1319687897048285 1.2823759104108916 1.0119296404603912 1.149051135803291 1.0460442725783414 1.0105200687999947 0.9735950180724277 1.1664608227981006 1.0 22.66222388697801 -5.754424829294919 1.2602676207297896 1.0379777369045764 1.1683330608645826 0.3135554141575073 0.07675998206919017 0.5331520617317831 1.7804294361889477 0.030239563964649434 0.04378515725117136 1.7602533143037064e-06 5.754424829294919 0.13035532396000615 (ac)AKS(ph)PENSTLEEILGQYQR ddPTM_KYSE-520_SHP099_60min_R1 3 AKSPENSTLEEILGQYQR 18 1 Q86SQ7-2;Q86SQ7-3;Q86SQ7-4;Q86SQ7 Q86SQ7-2 SDCCAG8 Serologically defined colon cancer antigen 8 1 AKS(0.994)PENS(0.003)T(0.003)LEEILGQYQR;AKS(1)PENSTLEEILGQYQR;AKS(1)PENSTLEEILGQYQR 116.24 9.5027e-12 84659000.0 120998.0 157490.0 124259.0 92074.0 102836.0 141752.0 98657.0 132533.0 168122.0 130328.0 True False 114285.99973646704 149923.9440026906 132268.93396142943 100824.68527694241 110928.60814319864 140867.27318776556 108630.21235953333 132073.27395643463 137595.28281072923 129173.39531364958 0.8847487476733576 1.1606410409717576 1.023964212137209 0.7805375482476646 0.8587573925253705 1.0905285321774019 0.8409642875436171 1.0224495039070838 1.0651983132953207 1.0 16.978949436098407 -9.063159347140493 9.85485241014187 1.0000198417638955 0.9694473897924824 0.005933743558102056 0.1173823557118477 0.0 0.0 0.11639439409942873 0.02822978712363022 8.646506113088647e-10 9.063159347140493 -0.030572451971413117 (ac)ALEVGDMEDGQLS(ph)DS(ph)DSDMTVAPSDRPLQLPK ddPTM_KYSE-520_SHP099_60min_R1 2 ALEVGDMEDGQLSDSDSDMTVAPSDRPLQLPK 32 1 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 2 ALEVGDMEDGQLS(0.952)DS(0.822)DS(0.206)DMT(0.019)VAPSDRPLQLPK;ALEVGDMEDGQLS(0.984)DS(0.831)DS(0.175)DMT(0.009)VAPSDRPLQLPK 93.46700000000001 8.285200000000001e-05 240990000.0 288366.0 314402.0 252237.0 264215.0 267640.0 265445.0 249295.0 288929.0 330170.0 270975.0 True False 272369.7631366305 299297.6559929767 268496.60061346943 289325.91416086373 288701.7453367082 263788.2592931765 274496.17148473853 287926.7727355356 270219.450908379 268574.3723153599 1.0141316194413892 1.1143939513392644 0.999710427688167 1.0772655323239009 1.0749415249408636 0.9821795617321093 1.0220490105527464 1.072056020287193 1.0061252254965245 1.0 18.034962122100588 -6.237400893108863 24.98436596983005 1.021333396478741 1.0573721704143235 0.2139795872922048 0.03734067058215718 1346.8812094218704 1399881.7214353809 0.01197233921667505 0.011966206094170798 5.788940780924094e-07 6.237400893108863 0.036038773935582524 (ac)ALEVGDMEDGQLS(ph)DSDS(ph)DMTVAPSDRPLQLPK ddPTM_KYSE-520_SHP099_60min_R1 1 ALEVGDMEDGQLSDSDSDMTVAPSDRPLQLPK 32 1 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 2 ALEVGDMEDGQLS(0.649)DS(0.649)DS(0.699)DMT(0.003)VAPSDRPLQLPK 75.82 0.0036490000000000003 93578000.0 93490.0 92603.0 86466.0 67025.0 92092.0 89905.0 76977.0 90708.0 116810.0 85030.0 True False 88303.92333230554 88154.21288006316 92039.73671049159 73395.03584819895 99339.11646819639 89343.86954643355 84758.58638312317 90393.35511940639 95600.24854047234 84276.70035233904 1.0477857220694418 1.046009306386145 1.092113672292547 0.8708816973297878 1.1787257457029676 1.0601253866479108 1.0057179033916785 1.0725782421653338 1.1343615511854697 1.0 16.36284620962177 (ac)AS(ph)EDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIR ddPTM_KYSE-520_SHP099_60min_R1 1 ASEDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIR 41 3 E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494C0R9 E9PEM5 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 AS(0.566)EDNRVPS(0.277)PPPT(0.124)GDDGGGGGREET(0.021)PT(0.008)EGGALS(0.004)LKPGLPIR 42.153999999999996 0.00029794 2723100000.0 187200.0 214430.0 139910.0 116990.0 116320.0 149960.0 128020.0 146710.0 186840.0 178320.0 True False 176815.64282605195 204128.46093400812 148928.8224639149 128108.69442567405 125473.72222973357 149024.04401516242 140961.5109547973 146201.09725237155 152914.56585311086 176740.22353086073 1.000426724000256 1.1549632384524233 0.8426424924030399 0.7248417585219638 0.7099330289566173 0.8431812579955306 0.797563271895398 0.8272089642731683 0.8651939145387034 1.0 17.43127088831938 -4.830681508473225 6.531296677207177 0.8103692551592196 1.0765605376906893 0.5856566178985578 0.08391312010205083 0.11608610494964977 8.50290873699434 0.021342920051489297 0.045623471303905226 1.4767891452517447e-05 4.830681508473225 0.2661912825314696 (ac)AS(ph)GVAVSDGVIK ddPTM_KYSE-520_SHP099_60min_R1 7 ASGVAVSDGVIK 12 0 E9PP50;P23528;E9PS23 E9PP50 CFL1 Cofilin-1 1 AS(0.999)GVAVS(0.001)DGVIK;AS(0.996)GVAVS(0.004)DGVIK;AS(1)GVAVSDGVIK;AS(0.999)GVAVS(0.001)DGVIK;AS(1)GVAVSDGVIK;AS(0.998)GVAVS(0.002)DGVIK;AS(1)GVAVSDGVIK 76.465 5.222e-09 11098660000.0 6142670.0 9180440.0 6514490.0 4281390.0 4560330.0 7868940.0 4889400.0 7597200.0 7835280.0 10060800.0 True False 5801923.849990944 8739397.882278634 6934424.448952541 4688292.018353156 4919202.026271665 7819827.026624924 5383668.267945524 7570847.086399803 6412590.663335265 9971669.13918396 0.5818407900430749 0.8764227693773873 0.6954126086778712 0.4701612090126795 0.49331781446112355 0.7842044212935915 0.5398963997702496 0.7592356887022997 0.6430809700792022 1.0 23.249403584205595 -9.111179886345388 0.7871285847317435 1.0113740411132595 0.6440264228390004 0.41590275527881804 0.12503958278396404 7.656328294404738 4.447169637155725 0.40687547942275926 0.04437470423680259 7.741410793503466e-10 9.111179886345388 -0.3673476182742591 (ac)AS(ph)GVQVADEVCR ddPTM_KYSE-520_SHP099_60min_R1 1 ASGVQVADEVCR 12 0 P60981;F6RFD5 P60981 DSTN Destrin 1 AS(1)GVQVADEVCR 67.113 3.8265999999999996e-07 0.0 29149.0 26181.0 26321.0 26918.0 33701.0 31643.0 17811.0 29904.0 39620.0 23132.0 True False 27532.04686290911 24923.225461517828 28017.69377508901 29476.27862680819 36353.07696753998 31445.504299625118 19611.509698608763 29800.270003646074 32426.006738922333 22927.068476423687 1.2008533446489595 1.0870655132882263 1.2220355953444333 1.2856540580894227 1.5855963881698394 1.3715449200128262 0.855386711073665 1.2997854494258707 1.4143110695668124 1.0 14.484764278955753 -10.02977898876655 11.360760470582113 1.0000000015523045 1.2551108171842484 0.14851235786437822 0.18523160486640441 0.0 0.0 0.1908749413020877 0.046293973192475225 9.33729352136871e-11 10.02977898876655 0.25511081563194393 (ac)AS(ph)PGKDNYR ddPTM_KYSE-520_SHP099_60min_R1 3 ASPGKDNYR 9 1 Q5TD90;O15131 Q5TD90 KPNA5 Importin subunit alpha-6 1 AS(1)PGKDNYR;AS(1)PGKDNYR;AS(1)PGKDNYR 48.56100000000001 0.0035231999999999998 8506700000.0 9550100.0 8646700.0 7170500.0 6504100.0 7451500.0 7953200.0 7214400.0 7727400.0 9693200.0 7995700.0 True False 9020336.91534763 8231299.553038703 7632721.903205644 7122247.70847103 8037890.656764599 7903561.128710246 7943701.957758875 7700595.452988716 7933159.225687068 7924864.318560475 1.138232347299814 1.0386675685740814 0.9631359726032639 0.898721722186502 1.0142622426909456 0.9973118543114567 1.0023770298696826 0.971700605012693 1.001046693898237 1.0 22.917954804435446 -4.391199684761129 2.7366213147904164 0.9800048693739549 1.1477619837020256 0.6984703631537532 0.03162697704502867 0.19588171449765854 2.3022694896698996 0.00873591952112449 0.06373313431033738 4.062564930738317e-05 4.391199684761129 0.16775711432807072 (ac)AS(ph)PSLERPEK ddPTM_KYSE-520_SHP099_60min_R1 4 ASPSLERPEK 10 1 Q13601-2;Q13601 Q13601-2 KRR1 KRR1 small subunit processome component homolog 1 AS(0.971)PS(0.029)LERPEK;AS(0.985)PS(0.015)LERPEK;AS(0.991)PS(0.009)LERPEK;AS(0.999)PS(0.001)LERPEK 99.13600000000001 8.274299999999999e-05 4385560000.0 2677480.0 2751820.0 2209070.0 1712840.0 1897010.0 2491680.0 1922410.0 2474910.0 2935280.0 2534240.0 True False 2528954.846975945 2619618.4366339683 2351470.186836969 1875627.798615878 2046293.8944895712 2476128.500878233 2116745.9637135747 2466325.114858336 2402307.144387279 2511788.605208885 1.0068342701019748 1.0429295009944184 0.9361736023328351 0.7467299575793311 0.8146760002995546 0.985802903852378 0.842724566599243 0.9818999535803817 0.9564129478911697 1.0 21.26028361991912 -9.727889283333813 14.131621387029636 0.9999999953760303 0.9203966912937281 0.06055392570577034 0.08914168941390035 0.0 0.0 0.09403471636885635 0.022806768709634873 1.8711591026607978e-10 9.727889283333813 -0.0796033040823022 (ac)AS(ph)PSSFTYYCPPSSSPVWSEPLYSLRPEHAR ddPTM_KYSE-520_SHP099_60min_R1 7 ASPSSFTYYCPPSSSPVWSEPLYSLRPEHAR 31 1 P49356 P49356 FNTB Protein farnesyltransferase subunit beta 1 AS(0.317)PS(0.317)S(0.317)FT(0.041)Y(0.003)Y(0.003)CPPS(0.001)SSPVWSEPLYSLRPEHAR;AS(0.31)PS(0.31)S(0.31)FT(0.053)Y(0.009)Y(0.006)CPPS(0.001)SSPVWSEPLYSLRPEHAR;AS(0.998)PS(0.002)SFTYYCPPSSSPVWSEPLYSLRPEHAR;AS(0.982)PS(0.016)S(0.002)FTYYCPPSSSPVWSEPLYSLRPEHAR;AS(0.855)PS(0.065)S(0.079)FT(0.001)YYCPPSSSPVWSEPLYSLRPEHAR;AS(0.7)PS(0.137)S(0.137)FT(0.02)Y(0.004)Y(0.001)CPPS(0.001)SSPVWSEPLYSLRPEHAR;AS(0.982)PS(0.014)S(0.003)FTYYCPPSSSPVWSEPLYSLRPEHAR 141.78 7.773499999999999e-23 3947960000.0 337969.1 302691.2 356620.4 283862.8 323011.3 345676.8 316602.7 320384.7 462130.0 369686.1 True False 319221.2802983025 288149.460403246 379608.72159681434 310841.03516553727 348430.4516271068 343519.3028689012 348607.9906605873 319273.36025405116 378218.84134927246 366410.9687654333 0.8712110376331544 0.7864105743726022 1.0360189894856284 0.8483398742479501 0.9509280052425583 0.937524616215333 0.9514125405010925 0.8713531729953249 1.0322257617549606 1.0 18.483103166590645 -1.0000000000000002 0.1873317195892677 0.9929727386007545 0.34712182565176125 0.2650694456001471 0.0673409721248783 78.09016202276878 0.9031357404633529 0.13589051336675342 14.52690134314768 0.09999999999999995 1.0000000000000002 -0.6458509129489933 (ac)AS(ph)PTDGTDLEASLLSFEK ddPTM_KYSE-520_SHP099_60min_R1 4 ASPTDGTDLEASLLSFEK 18 0 G3V5T8 G3V5T8 LIN52 1 AS(0.492)PT(0.492)DGT(0.015)DLEASLLSFEK;AS(0.793)PT(0.202)DGT(0.004)DLEASLLSFEK;AS(0.332)PT(0.332)DGT(0.332)DLEAS(0.004)LLSFEK;AS(0.346)PT(0.346)DGT(0.308)DLEASLLSFEK 96.59100000000001 2.6182999999999993e-86 93139600.0 119478.0 199669.0 205294.0 81847.0 128299.0 165922.0 126369.0 163809.0 253778.0 189337.0 True False 112850.31716651197 190076.60153072092 218527.57972201385 89625.71427180225 138395.40137854696 164886.41925235928 139143.6117625902 163240.78481230792 207698.3124227722 187659.62148195686 0.6013564147435005 1.0128795956726175 1.1644890786642927 0.47759722397404286 0.7374809790493659 0.8786462316733001 0.7414680401876896 0.8698769800513705 1.106782113182201 1.0 17.517758734863975 -7.640348197750334 4.932014000324143 1.0501801319073312 0.8117021484156121 0.2213235797939478 0.18493364830064632 0.34170182447916264 12.919067827485561 0.1399403881924161 0.04900290950349163 2.289031674389625e-08 7.640348197750334 -0.23847798349171911 (ac)ASEDNRVPS(ph)PPPTGDDGGGGGREETPTEGGALSLKPGLPIR ddPTM_KYSE-520_SHP099_60min_R1 6 ASEDNRVPSPPPTGDDGGGGGREETPTEGGALSLKPGLPIR 41 3 E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494C0R9 E9PEM5 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 AS(0.002)EDNRVPS(0.984)PPPT(0.014)GDDGGGGGREETPTEGGALSLKPGLPIR;ASEDNRVPS(0.988)PPPT(0.012)GDDGGGGGREETPTEGGALSLKPGLPIR;AS(0.315)EDNRVPS(0.543)PPPT(0.14)GDDGGGGGREET(0.001)PT(0.001)EGGALSLKPGLPIR;ASEDNRVPS(0.986)PPPT(0.014)GDDGGGGGREETPTEGGALSLKPGLPIR;AS(0.027)EDNRVPS(0.898)PPPT(0.073)GDDGGGGGREET(0.001)PT(0.001)EGGALSLKPGLPIR;AS(0.003)EDNRVPS(0.995)PPPT(0.002)GDDGGGGGREETPTEGGALSLKPGLPIR 111.73 4.9389e-23 18652720000.0 1713741.0 2100506.0 1343792.0 1188534.0 1110331.0 1602149.0 1027409.0 1383096.0 1850887.0 1850303.0 True False 1618676.3704720119 1999594.538836217 1430414.9824632213 1301491.9140142233 1197707.7327807974 1592149.3938040028 1131269.5282655642 1378298.3627930328 1514812.5778643019 1833910.7549339507 0.882636391175049 1.0903445183777405 0.7799806935069413 0.7096811611539391 0.6530894317286086 0.8681716869375931 0.6168618212320301 0.7515623969622627 0.8260012510362635 1.0 20.80649200294254 -4.84673618553222 7.289424585344589 0.7564329684020668 0.9852392992563141 0.34341025818122894 0.11439298242313926 0.1926931028690979 13.781497555769393 0.028103287214444498 0.05933489488725595 1.4231930507013357e-05 4.84673618553222 0.2288063308542474 (ac)ASFVTEVLAHS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 2 ASFVTEVLAHSGR 13 0 F5H3C1;O43264-2;O43264 F5H3C1 ZW10 Centromere/kinetochore protein zw10 homolog 1 ASFVTEVLAHS(1)GR;ASFVT(0.002)EVLAHS(0.998)GR 70.47 1.6781999999999999e-06 11180000.0 12873.099999999999 9469.7 11399.4 10263.2 10004.099999999999 10044.3 9295.2 9961.8 14706.7 10300.4 True False 12159.003481111366 9014.76139769051 12134.223563684889 11238.611442256406 10791.365754457325 9981.609797956087 10234.849528409879 9927.244840901603 12036.33400573723 10209.146469589932 1.1909911878852446 0.8830083322384348 1.1885639607413998 1.1008375162147932 1.0570291832526504 0.9777124686856428 1.002517650118598 0.9723873460403344 1.178975543312064 1.0 13.31757463503421 -6.006968397794872 19.031505304747025 1.0224680620122413 1.0824778302336442 0.08731562353782829 0.09646923881557788 39.04054921653031 106635.32731382293 0.02969268767964098 0.03219287698221192 9.840827116726677e-07 6.006968397794872 0.060009768221402915 (ac)ASGEHS(ph)PGSGAAR ddPTM_KYSE-520_SHP099_60min_R1 2 ASGEHSPGSGAAR 13 0 A6NKB8;Q9H4A4 A6NKB8 RNPEP Aminopeptidase B 1 AS(0.003)GEHS(0.995)PGS(0.002)GAAR;AS(0.002)GEHS(0.93)PGS(0.068)GAAR 60.167 0.0010056000000000002 519504000.0 0.0 25382.0 37755.8 33764.4 1178.6 1363.2 25408.4 20828.0 24281.6 20225.2 True False 0.0 24162.610620841275 40189.599279415925 36973.35842436296 1271.3491146833212 1354.691763146635 27976.929034087436 20755.75252929174 19872.673529323973 20046.0204629675 0.0 1.2053569767365377 2.0048667192404177 1.8444238592226616 0.06342152134544503 0.06757908711353745 1.3956350631174548 1.0354051352803606 0.9913525512974626 1.0 14.291028240759243 -5.750948036361693 24.999944152478918 0.7579399000161189 1.312440259025371 0.12934107177146648 0.6365610192572256 459.6448758325151 1095287.840861462 0.20399805384797504 0.26050251191303014 1.7744017766020227e-06 5.750948036361693 0.5545003590092521 (ac)ASHLRPPS(ph)PLLVR ddPTM_KYSE-520_SHP099_60min_R1 9 ASHLRPPSPLLVR 13 1 Q8TDB6;Q8TDB6-2 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 ASHLRPPS(1)PLLVR;ASHLRPPS(1)PLLVR;ASHLRPPS(1)PLLVR;ASHLRPPS(1)PLLVR;ASHLRPPS(1)PLLVR;ASHLRPPS(1)PLLVR;ASHLRPPS(1)PLLVR;ASHLRPPS(1)PLLVR;ASHLRPPS(1)PLLVR 104.66 4.1235e-07 56367600000.0 192631.0 220026.1 202511.7 170138.4 226759.0 240818.4 188072.0 151206.8 265301.9 197550.0 True False 181945.37442962173 209455.7158900907 215565.9282121766 186308.30238202494 244603.64321777967 239315.36303855013 207084.1531658387 150682.29890273226 217129.7626766504 195799.8606915741 0.9292415928539597 1.0697439474690302 1.1009503655967263 0.951524182519719 1.2492534078105488 1.2222448074951497 1.0576317696775062 0.7695730649169793 1.1089372684420618 1.0 17.579020212924657 -7.020269983980753 24.872786033264497 0.9462735688044289 1.092509313746031 0.1769246902785636 0.12210313476554556 1121.0450528723106 1375601.4920054076 0.05700470649275704 0.03345426463034504 9.543990887861964e-08 7.020269983980753 0.14623574494160219 (ac)ASLEVS(ph)RSPRR ddPTM_KYSE-520_SHP099_60min_R1 1 ASLEVSRSPRR 11 2 Q5QPJ9;Q5QPK2;O60762 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ASLEVS(0.5)RS(0.5)PRR 86.46700000000001 7.5233e-05 25098000.0 6576.5 5973.0 5689.1 5894.7 3354.6 4130.1 6324.9 5997.3 6539.2 4252.7 True False 6211.688435072278 5686.048114344215 6055.828488881843 6454.930515693817 3618.587934936931 4104.322513917192 6964.282617075435 5976.496766080343 5351.846119817286 4215.0243865505345 1.4737016599222479 1.3489953065247928 1.4367244251788955 1.5314100047179948 0.8584975086937252 0.9737363624783347 1.6522520342461937 1.4179032475234032 1.269707035834518 1.0 12.04132526274611 (ac)ASLEVSRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 ASLEVSRSPR 10 1 Q5QPJ9;Q5QPK2;O60762 Q5QPJ9 DPM1 Dolichol-phosphate mannosyltransferase subunit 1 1 ASLEVS(0.02)RS(0.98)PR 50.786 0.00077193 526560000.0 225270.0 195600.0 241750.0 308160.0 205040.0 191670.0 234050.0 195380.0 312640.0 107520.0 True False 212773.82403538848 186203.08239841412 257333.5918136759 337447.4337483173 221175.48148198574 190473.71643362346 257710.05810787654 194702.27238203477 255872.45701304046 106567.45644929413 1.9966116404085184 1.7472790343552154 2.414748370541412 3.1665148535179517 2.0754505066677957 1.7873535015284219 2.4182810277591416 1.8270331193902154 2.401037479343304 1.0 16.701407409838385 -5.984727495933023 24.993571896596418 1.9671794315196094 2.336215791953192 0.1381893129919265 0.5036746215758703 584.3483766922061 956285.5550447163 0.1586550932960918 0.17983893723868158 1.0357918847352387e-06 5.984727495933023 0.3690363604335827 (ac)ASPSSFTY(ph)YCPPS(ph)SSPVWSEPLYSLRPEHAR ddPTM_KYSE-520_SHP099_60min_R1 1 ASPSSFTYYCPPSSSPVWSEPLYSLRPEHAR 31 1 P49356 P49356 FNTB Protein farnesyltransferase subunit beta 2 AS(0.127)PS(0.138)S(0.145)FT(0.158)Y(0.217)Y(0.217)CPPS(0.34)S(0.332)S(0.324)PVWS(0.003)EPLYS(0.001)LRPEHAR 42.863 0.01635 149470000.0 20356.0 27482.0 10046.0 15495.0 13421.0 23095.0 20840.0 21304.0 14290.0 19026.0 True False 19226.812101320033 26161.723468677003 10693.581234168314 16967.640141258373 14477.156344955749 22950.855538344724 22946.71057880001 21230.101396390975 11695.296221585048 18857.444442004024 1.0195873656397079 1.3873419353898802 0.5670747840226373 0.8997847080203399 0.7677157098078783 1.2170713592146574 1.2168515542693235 1.1258207050103766 0.6201951837935343 1.0 14.20284655499726 -4.72737331035728 24.999997681925684 0.9453845299427853 1.2034643043134443 0.18333716702539904 0.23090745848252817 346.3889730831127 254199.13447068955 0.0607292974855574 0.16065615275153153 1.873383494914289e-05 4.72737331035728 0.258079774370659 (ac)AT(ph)PPKR ddPTM_KYSE-520_SHP099_60min_R1 1 ATPPKR 6 1 D6RCP9;D6RFG8;P27707;D6R9C6;D6RG38;Q9UBK9 D6RCP9 DCK;UXT Deoxycytidine kinase;Protein UXT 1 AT(1)PPKR 47.067 0.041927 2678300000.0 233330.0 249800.0 168590.0 141580.0 157220.0 220070.0 177470.0 200080.0 246850.0 211550.0 True False 220386.7197681764 237799.23304255583 179457.5811535376 155035.72063242088 169592.31954056644 218696.46149917837 195410.39954028954 199385.96917902303 202028.26258210413 209675.8315834093 1.0510830843205994 1.134128007251799 0.8558810989245995 0.739406728289271 0.8088310334093151 1.043021791532424 0.9319643473671168 0.9509248999911897 0.9635267024169976 1.0 17.677801052303337 -4.759929324458179 24.999959854306113 0.905529229745179 1.0926055868239857 0.4039735589120711 0.08764282641455179 39.43629445728099 652834.0680650033 0.02487377240562767 0.059021366546978975 1.738083655297848e-05 4.759929324458179 0.18707635707880665 (ac)AT(ph)S(ph)PQKSPSVPKS(ph)PTPK ddPTM_KYSE-520_SHP099_60min_R1 1 ATSPQKSPSVPKSPTPK 17 2 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 3 AT(0.956)S(0.834)PQKS(0.198)PS(0.025)VPKS(0.931)PT(0.056)PK 50.806000000000004 0.0066573000000000005 1957300000.0 1443000.0 1411300.0 1346600.0 1459700.0 1643500.0 1651700.0 1957900.0 2099800.0 2373500.0 1989700.0 True False 1362953.9134508176 1343499.029595511 1433403.9906361788 1598429.4491251933 1772834.0997641573 1641391.127632992 2155823.639262598 2092516.2838970025 1942532.2310659303 1972072.8059631768 0.6911275837938141 0.6812623882510945 0.7268514561439289 0.8105326762236382 0.8989699033440555 0.8323177129514359 1.0931764956870726 1.0610745595039024 0.9850205454849733 1.0 20.91128138415516 -5.924857767369374 0.7889032017918672 1.040741848601062 0.6721524318260395 0.8566286764607011 0.054832303997819465 0.23464365955781702 0.3232658363899965 0.033463014967721035 0.04693097002265075 1.1888915289122479e-06 5.924857767369374 -0.36858941677502255 (ac)ATDELATKLS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 ATDELATKLSR 11 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ATDELAT(0.078)KLS(0.922)R;ATDELAT(0.124)KLS(0.876)R 50.592 0.00030769 1455420000.0 1203640.0 910470.0 1047800.0 853220.0 916340.0 1077770.0 880280.0 902930.0 1210410.0 912320.0 True False 1136871.6898031465 866729.6545566686 1115342.8645392768 934309.7722700519 988450.7447386014 1071043.237651517 969267.2931048976 899797.9465754455 990630.0559530288 904237.55457422 1.2572710390672366 0.9585198603753935 1.2334622233915737 1.033256988214775 1.0931317105094525 1.184471085317664 1.0719166530981987 0.9950902194049384 1.0955418196709257 1.0 19.78634231099758 -6.455555066047372 0.016211094373603768 2.938980172205951e-07 2.178604532872764 0.1858060772272042 0.08814059283294064 1429.8866517542601 10.659005810218417 689.2647292822311 741.1202514431973 3.503038689657981e-07 6.455555066047372 2.178604238974747 (ac)ATS(ph)PQKS(ph)PSVPKS(ph)PTPK ddPTM_KYSE-520_SHP099_60min_R1 7 ATSPQKSPSVPKSPTPK 17 2 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 3 AT(0.469)S(0.538)PQKS(0.913)PS(0.207)VPKS(0.74)PT(0.133)PK;AT(0.516)S(0.546)PQKS(0.915)PS(0.049)VPKS(0.862)PT(0.112)PK;AT(0.456)S(0.544)PQKS(0.944)PS(0.057)VPKS(0.977)PT(0.023)PK;AT(0.479)S(0.548)PQKS(0.927)PS(0.159)VPKS(0.801)PT(0.086)PK;AT(0.461)S(0.547)PQKS(0.932)PS(0.064)VPKS(0.896)PT(0.1)PK;AT(0.462)S(0.539)PQKS(0.937)PS(0.1)VPKS(0.926)PT(0.037)PK;AT(0.486)S(0.545)PQKS(0.835)PS(0.211)VPKS(0.804)PT(0.119)PK 92.01 5.0899e-06 42099600000.0 19577200.0 19173100.0 18216670.0 20662500.0 21779700.0 25052700.0 26580600.0 29748000.0 34820700.0 28948900.0 True False 18491213.689819362 18251995.496590182 19390945.695902526 22626257.787592832 23493638.480458435 24896336.806472816 29267626.44965701 29644811.13123541 28498138.638414763 28692435.26790342 0.6444630271765193 0.6361257009441663 0.6758208397038387 0.7885792048088552 0.8188094966877705 0.867696888535736 1.0200467885135225 1.0331925768739942 0.993228297714206 1.0 24.7741670861287 -5.972098328851085 0.762006833183599 1.029258839656796 0.6233443431964255 0.9598628058828937 0.030305816787652505 0.12616057146920182 0.1627742666381613 0.02005341233606154 0.026984349984069515 1.0663546599550424e-06 5.972098328851085 -0.4059144964603706 (ac)ATSPQKS(ph)PSVPK ddPTM_KYSE-520_SHP099_60min_R1 4 ATSPQKSPSVPK 12 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 AT(0.017)S(0.024)PQKS(0.915)PS(0.044)VPK;AT(0.016)S(0.013)PQKS(0.968)PS(0.003)VPK;AT(0.002)S(0.002)PQKS(0.987)PS(0.008)VPK;AT(0.038)S(0.034)PQKS(0.915)PS(0.013)VPK 65.395 0.00012158 4240060000.0 5364520.0 6951700.0 4839160.0 3427610.0 3808770.0 4623460.0 3096950.0 3859440.0 4542540.0 4290000.0 True False 5066939.381694503 6617729.897285567 5151099.996529756 3753369.023851472 4108498.530063123 4594603.271154595 3410019.9293193193 3846052.5034400686 3717729.24411469 4251993.937569497 1.1916619487446496 1.556382721718639 1.211455160134636 0.8827315087840772 0.966252207878641 1.0805761575899466 0.8019813714194846 0.9045291597096042 0.8743496107239982 1.0 22.01970810922126 -5.09340349869552 3.8937146768526407 0.9296206864180392 1.3779911916778067 0.7344504816176316 0.1098508734792284 0.1059179564897868 2.901603145129344 0.02940777285307937 0.05548920675437916 8.064853844870644e-06 5.09340349869552 0.4483705052597675 (ac)ATSPQKS(ph)PSVPKS(ph)PTPK ddPTM_KYSE-520_SHP099_60min_R1 4 ATSPQKSPSVPKSPTPK 17 2 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 2 AT(0.028)S(0.025)PQKS(0.944)PS(0.237)VPKS(0.687)PT(0.079)PK;AT(0.031)S(0.035)PQKS(0.919)PS(0.092)VPKS(0.538)PT(0.385)PK;AT(0.219)S(0.2)PQKS(0.575)PS(0.088)VPKS(0.774)PT(0.144)PK;AT(0.318)S(0.336)PQKS(0.453)PS(0.155)VPKS(0.662)PT(0.076)PK 68.369 2.5274000000000002e-05 17276800000.0 13631600.0 13008500.0 13167900.0 14959400.0 16477400.0 18011600.0 19965200.0 22025400.0 27168800.0 20700300.0 True False 12875427.974079087 12383552.13384343 14016723.903384918 16381136.878292382 17774077.636418585 17899182.923336204 21983477.257574763 21948999.028167017 22235630.78971311 20516911.446589723 0.6275519591531509 0.6035777931820141 0.6831790418296487 0.7984211912663501 0.8663135132541089 0.8724111799152581 1.0714808276481014 1.0698003491073864 1.0837708613013033 1.0 24.290310232580673 -5.8568145304526205 0.7245353568887531 1.0749559429570044 0.5884219447494056 0.9380642852532467 0.04401985482141546 0.16571980519978197 0.1911468383353414 0.028216339894503367 0.04468914328914511 1.3905463503385653e-06 5.8568145304526205 -0.4865339982075988 (ac)ATTATMATSGS(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 2 ATTATMATSGSAR 13 0 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 1 ATTATMAT(0.003)S(0.027)GS(0.97)AR;ATTATMATS(0.003)GS(0.997)AR 66.24600000000001 3.4158e-06 49001000.0 31256.0 37859.0 48013.0 27545.9 31952.0 42615.0 24260.0 32119.0 38073.0 29361.0 True False 29522.167372708736 36040.196812482434 51107.994803516194 30163.85405402319 34466.44061798867 42349.023977768404 26712.437554783508 32007.58668563097 31159.902942225875 29100.88438251236 1.0144766387391835 1.2384570976866986 1.756235107213051 1.0365270573065335 1.1843777723367281 1.4552486935145268 0.9179252837702712 1.0998836415042197 1.070754501225772 1.0 14.82877537718051 -6.769443597813496 24.998860083235204 1.030464494497182 1.2850711025684545 0.2770443798094535 0.204523609980649 263.22278878752945 822091.2588669426 0.08641889446324576 0.05943778481415785 1.7004207743668339e-07 6.769443597813496 0.25460660807127256 (ac)DDDIAALVVDNGSGMCK ddPTM_KYSE-520_SHP099_60min_R1 11 DDDIAALVVDNGSGMCK 17 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5 P60709 ACTB Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed 0 ;;;;;;;;;; 151.1 1.1337999999999996e-71 4135790000.0 1550046.0 1752305.0 9356610.0 914863.0 2398880.0 1518196.0 1577409.0 1255715.0 4491175.0 2200077.0 False True 1464061.858439907 1668121.6375365735 9959752.05170531 1001811.3044564092 2587658.208239884 1508720.375617787 1736868.8957482877 1251359.217751084 3675690.833308412 2180586.029414008 0.671407520130424 0.7649877670659251 4.567465771750271 0.4594229674697253 1.1866801737399324 0.6918875730040459 0.7965147315077676 0.5738637232704658 1.6856435764179347 1.0 21.056284478689175 (ac)EEEIAALVIDNGSGMCK ddPTM_KYSE-520_SHP099_60min_R1 7 EEEIAALVIDNGSGMCK 17 0 P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 P63261 ACTG1 Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;;;;;; 152.67 1.1337999999999996e-71 817393000.0 497591.0 696077.0 1653990.0 607138.0 838596.0 628944.0 660761.0 578603.0 1198890.0 701195.0 False True 469988.63530693314 662636.4160871225 1760608.841877569 664840.2129773049 904588.7342414518 625018.5272010695 727557.170285915 576595.9612399548 981201.7975574606 694982.957821455 0.6762592233631085 0.9534570720471646 2.5333122518521947 0.956628080581087 1.3015984407402488 0.8993292859443617 1.04687051977011 0.8296548206698409 1.4118357673592579 1.0 19.406618075340692 (ac)GDKKS(ph)PTRPK ddPTM_KYSE-520_SHP099_60min_R1 3 GDKKSPTRPK 10 3 G3V1X5;A0A0B4J255;F8VRE5;G3V219;G3V212;Q8IY57-4;Q8IY57;Q8IY57-5 G3V1X5 YAF2 YY1-associated factor 2 1 GDKKS(0.871)PT(0.129)RPK;GDKKS(0.952)PT(0.048)RPK;GDKKS(0.886)PT(0.114)RPK 51.013000000000005 0.00046978 39177640000.0 30383500.0 26407800.0 26152600.0 24562900.0 25985700.0 24686900.0 22966700.0 24187700.0 32427300.0 22548700.0 True False 28698066.686994348 25139129.649084087 27838438.441639517 26897350.630894814 28030626.75159202 24532819.899959393 25288398.169391837 24103798.514151644 26539319.745710634 22348936.06062312 1.2840909566857566 1.1248468195932175 1.2456270117792507 1.2035181700790492 1.2542264506711596 1.0977175751638615 1.1315258185353974 1.0785210736103201 1.1874981284890158 1.0 24.4137028165777 -6.270699227566457 24.732778755518908 1.105989660499018 1.2172733462197074 0.5205822131510649 0.058922330473299235 498.61075056285375 1331770.6275916342 0.01926263577671801 0.017238123197506335 5.361678542190492e-07 6.270699227566457 0.11128368572068936 (ac)GDS(ph)DDEYDRR ddPTM_KYSE-520_SHP099_60min_R1 4 GDSDDEYDRR 10 1 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;A0A087X0F4 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 1 GDS(1)DDEYDRR;GDS(1)DDEYDRR;GDS(1)DDEYDRR;GDS(1)DDEYDRR 64.207 2.4945999999999998e-05 2470770000.0 82485.0 85372.1 107203.0 91700.0 56448.6 70467.0 67399.0 81548.0 96527.0 73261.0 True False 77909.39262022918 81270.6961698654 114113.47691086477 100415.14042938968 60890.78367140072 70027.1893145935 74212.34867085134 81265.12902144626 79000.13004765152 72611.96453619558 1.0729553058902976 1.1192466240099264 1.5715519837503025 1.3829007529376895 0.8385778302561682 0.9644029019444362 1.02204022635771 1.1191699541600648 1.0879767618499232 1.0 16.147919665440785 -5.75092659083553 24.999700285983188 1.010105795321648 1.2950544969419293 0.46949968222537797 0.146327876549353 208.61991140999794 496101.4976151857 0.04757591079008325 0.06075555763480406 1.7744893989892673e-06 5.75092659083553 0.2849487016202814 (ac)GDVEKGKKIFIMK ddPTM_KYSE-520_SHP099_60min_R1 1 GDVEKGKKIFIMK 13 3 P99999;C9JFR7 P99999 CYCS Cytochrome c 0 51.211000000000006 0.0038929000000000004 873230000.0 3791600.0 2226700.0 302720.0 3769800.0 1157100.0 1974400.0 2348600.0 3107200.0 1096200.0 1099600.0 False True 3581272.3896327903 2119725.9896551576 322233.81556912547 4128080.658568304 1248157.187001586 1962077.037233507 2586019.4081271463 3096421.8484259313 897157.7129532208 1089858.399475856 3.2859978794998748 1.9449554095051194 0.29566576329924776 3.7877220201758464 1.1452471143057303 1.8003045516528806 2.3728031176993607 2.841123076094187 0.8231874098366261 1.0 20.055709273459943 (ac)GT(ph)PQKDVIIK ddPTM_KYSE-520_SHP099_60min_R1 2 GTPQKDVIIK 10 1 Q5T4U8;P53611 Q5T4U8 RABGGTB Geranylgeranyl transferase type-2 subunit beta 1 GT(1)PQKDVIIK;GT(1)PQKDVIIK 69.979 0.0015026 12327400000.0 12007100.0 13926600.0 10396300.0 8000500.0 9075900.0 11954900.0 8582300.0 11526000.0 13587400.0 12270600.0 True False 11341042.227439556 13257545.231747225 11066462.132668125 8760865.11456197 9790121.695192907 11880285.034655005 9449882.639176358 11486018.99618862 11120270.670480382 12161892.030382339 0.9325064060022759 1.0900890419539797 0.9099293189762204 0.7203537979679425 0.8049834409593201 0.9768451327290331 0.7770076083202391 0.9444269828653896 0.9143536747983109 1.0 23.53586435109456 -4.9607446385251635 9.578228850877396 0.867233669042245 1.0089664030859338 0.24676085303970507 0.09156384863971193 0.45097876273045034 104.12154582839216 0.023721808292167378 0.049381438305951625 1.0945997924905358e-05 4.9607446385251635 0.1417327340436888 (ac)MDLAAAAEPGAGS(ph)QHLEVR ddPTM_KYSE-520_SHP099_60min_R1 5 MDLAAAAEPGAGSQHLEVR 19 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR;MDLAAAAEPGAGS(1)QHLEVR 119.62 2.351e-18 1931870000.0 355128.0 341975.0 337392.0 257173.0 327627.4 353846.0 279415.2 335528.0 438835.0 369451.0 True False 335428.3419098835 325546.00768506 359140.8281662868 281614.64459811844 353409.8124350908 351637.51586149115 307661.2152455622 334364.13168082404 359153.6261301101 366177.95156852825 0.9160255020081673 0.8890377104644864 0.9807822306829294 0.7690649952893621 0.9651313273266592 0.9602913401946979 0.8401959045532129 0.9131192368316299 0.9808171808042255 1.0 18.482185400142306 -7.787662104130465 3.9159182553923255 0.9972191312250508 0.9029860372398025 0.25467193854589276 0.05956583382991261 0.29264626437814834 9.083694764753508 0.05301450534274701 0.014832247883518022 1.6305641736008483e-08 7.787662104130465 -0.09423309398524826 (ac)MDLFGDLPEPERS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 MDLFGDLPEPERSPR 15 1 E9PC05;F8SNU7;Q9H0C8;F8SNU6 E9PC05 ILKAP;ILKAP3;ILKAP2 Integrin-linked kinase-associated serine/threonine phosphatase 2C 1 MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR;MDLFGDLPEPERS(1)PR 138.39 4.3192e-14 3767770000.0 228560.0 305292.0 247917.0 556526.0 344240.0 272206.0 250633.0 296360.0 361268.0 238176.0 True False 215881.32117693571 290625.31406736525 263898.12650122534 609418.063714356 371329.7295423272 270507.0613843114 275969.42958235997 295331.996330944 295670.83802516386 236065.94593812415 0.914495821576573 1.2311191811780502 1.1179000234552947 2.5815585610729817 1.5729915133106804 1.145896161809017 1.1690353239458564 1.2510571787781464 1.2524925475810176 1.0 17.84883041278585 -6.264558935610145 24.368220178648233 1.1797209993348574 1.51026517026704 0.12345440835787125 0.4221801330689828 471.03723964792664 3679461.4061465645 0.15729039161871497 0.1446139791829256 5.438023304215421e-07 6.264558935610145 0.3305441709321826 (ac)MDLFGDLPEPERS(ph)PRPAAGK ddPTM_KYSE-520_SHP099_60min_R1 13 MDLFGDLPEPERSPRPAAGK 20 2 E9PC05;F8SNU7;Q9H0C8;F8SNU6 E9PC05 ILKAP;ILKAP3;ILKAP2 Integrin-linked kinase-associated serine/threonine phosphatase 2C 1 MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK;MDLFGDLPEPERS(1)PRPAAGK 157.9 2.7081999999999995e-19 37625530000.0 9825830.0 10674150.0 8926680.0 7087900.0 7857870.0 9985090.0 8444520.0 10130340.0 13325510.0 10622730.0 True False 9280771.622593507 10161347.81177421 9502108.075992998 7761531.884945163 8476239.66383559 9922769.349528927 9298174.492173139 10095200.214979136 10905933.292770728 10528620.876558878 0.8814802747106598 0.9651166977051693 0.9025026342385138 0.7371840980831198 0.8050664719732907 0.9424567059510301 0.8831331853609405 0.9588340518040005 1.0358368318733848 1.0 23.327813137151228 -7.35019847180028 1.5767474327798257 1.0207091727344784 0.867881404734158 0.4753007620865852 0.06183231560563281 0.40352870273163066 1.7824991059296071 0.057362915312051455 0.02081048169603675 4.464795051867325e-08 7.35019847180028 -0.15282776800032039 (ac)MDPQRS(ph)PLLEVK ddPTM_KYSE-520_SHP099_60min_R1 3 MDPQRSPLLEVK 12 1 A0A140T9E6;A2AB20;Q9BW19 A0A140T9E6 KIFC1 Kinesin-like protein KIFC1 1 MDPQRS(1)PLLEVK;MDPQRS(1)PLLEVK;MDPQRS(1)PLLEVK 100.19 2.5022e-05 1618810000.0 2394130.0 2923340.0 1966010.0 1677740.0 1934460.0 2629360.0 1937600.0 2577790.0 2948800.0 2801010.0 True False 2261322.836320169 2782898.3583772 2092742.150327219 1837191.905169078 2086690.996428219 2612949.188928431 2133471.517153691 2568848.2481507068 2413372.2531987433 2776195.230552808 0.814540278519924 1.0024145015993913 0.753816636271111 0.661766105261714 0.7516369790797126 0.9411979244731031 0.7684875666070736 0.9253125356170239 0.8693092714225945 1.0 21.404677595542438 -7.277692830447432 23.301497118623523 0.9229832281311701 0.8150927763152364 0.2375884012323527 0.09657777508592985 612.8643866569528 878613.3743261667 0.05590030080526305 0.02701743000428042 5.2760289459005473e-08 7.277692830447432 -0.10789045181593371 (ac)MDRNPS(ph)PPPPGR ddPTM_KYSE-520_SHP099_60min_R1 6 MDRNPSPPPPGR 12 1 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR;MDRNPS(1)PPPPGR 69.03 4.5066000000000005e-05 4597940000.0 1118537.0 984005.0 1093850.0 867249.0 1123380.0 1097240.0 881879.0 983010.0 1137540.0 1049551.0 True False 1056489.522861772 936731.922778383 1164361.321221881 949672.0842120795 1211783.6148421434 1090391.7181594886 971027.9356296331 979600.1677462576 930991.4110498163 1040252.7946783223 1.0156084446650975 0.9004848894138746 1.1193061217220155 0.9129243286539278 1.164893399990205 1.0481987875809273 0.9334538110324466 0.9416943388738309 0.8949665079608915 1.0 19.98850273356663 -6.768437938547716 24.83956916020755 0.9376698346158201 1.0264480316100044 0.21272647473270878 0.07929519581287121 236.65752776189947 839944.4901805476 0.0322045030156714 0.022251723397958764 1.704362858391543e-07 6.768437938547716 0.08877819699418432 (ac)MDSAGQDINLNS(ph)PNKGLLSDSMTDVPVDTGVAAR ddPTM_KYSE-520_SHP099_60min_R1 3 MDSAGQDINLNSPNKGLLSDSMTDVPVDTGVAAR 34 1 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;A0A087WZ51;A0A087WYR3 O43399 TPD52L2 Tumor protein D54 1 MDSAGQDINLNS(0.986)PNKGLLS(0.013)DS(0.001)MTDVPVDTGVAAR;MDSAGQDINLNS(0.996)PNKGLLS(0.002)DS(0.002)MTDVPVDTGVAAR;MDS(0.001)AGQDINLNS(0.759)PNKGLLS(0.181)DS(0.046)MT(0.013)DVPVDTGVAAR 102.01 1.3689999999999998e-41 1057390000.0 254639.0 442640.0 263790.0 208264.0 236038.0 375496.0 235174.0 326782.0 404603.0 351210.0 True False 240513.6670597385 421374.909983815 280794.3254789231 228057.3479431452 254612.84772749178 373152.3901808312 258947.68299705893 325648.46951349225 331137.29441161524 348098.55263724545 0.6909355561451545 1.2105046309196552 0.8066518040698081 0.6551516695928479 0.7314389726659525 1.0719734033760675 0.7438918692285087 0.935506531257691 0.9512745511375177 1.0 18.40913628991349 -7.501934814005761 21.382483636197513 0.9648886790738737 0.8530986272622232 0.09802297345274502 0.16475063673294224 317.91901909132025 324586.87519730284 0.09340613163079156 0.04382123399629299 3.148220814931634e-08 7.501934814005761 -0.11179005181165047 (ac)MEDLDQS(ph)PLVSSSDS(ph)PPRPQPAFK ddPTM_KYSE-520_SHP099_60min_R1 3 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-4;Q9NQC3-2 Q9NQC3-5;Q9NQC3-2 RTN4 Reticulon-4 2 MEDLDQS(0.986)PLVS(0.013)S(0.008)S(0.019)DS(0.974)PPRPQPAFK;MEDLDQS(0.992)PLVS(0.013)S(0.072)S(0.256)DS(0.667)PPRPQPAFK;MEDLDQS(0.996)PLVS(0.018)S(0.058)S(0.224)DS(0.705)PPRPQPAFK 96.46 1.4102000000000002e-10 548528000.0 462640.0 481100.0 383220.0 485940.0 454340.0 460440.0 470300.0 531430.0 669570.0 414410.0 True False 436976.43695002416 457987.2338541777 407922.9743736799 532123.5914968116 490093.9731590191 457566.2231684545 517842.513685683 529586.5933666942 547992.9664861237 410738.64980610175 1.063879518414711 1.1150332068101716 0.9931448490816458 1.295528413866122 1.1932015002493161 1.114008198119312 1.2607591565345555 1.2893517413486586 1.3341646001534453 1.0 18.647861183283016 -5.260572284791341 24.99995730395764 1.2215983931023853 1.063120592094471 0.34797783579366204 0.09661308159785273 84.45861496765039 2435069.5662353365 0.02631754277482093 0.04237098131243913 5.488172018362163e-06 5.260572284791341 -0.1584778010079142 (ac)MEDLDQSPLVSSSDS(ph)PPRPQPAFK ddPTM_KYSE-520_SHP099_60min_R1 14 MEDLDQSPLVSSSDSPPRPQPAFK 24 1 Q9NQC3-5;Q9NQC3;Q9NQC3-4;Q9NQC3-2 Q9NQC3-5;Q9NQC3-2 RTN4 Reticulon-4 1 MEDLDQSPLVS(0.001)S(0.004)S(0.016)DS(0.979)PPRPQPAFK;MEDLDQS(0.001)PLVS(0.011)S(0.011)S(0.011)DS(0.966)PPRPQPAFK;MEDLDQSPLVSSS(0.001)DS(0.999)PPRPQPAFK;MEDLDQSPLVSS(0.001)S(0.003)DS(0.996)PPRPQPAFK;MEDLDQSPLVSSS(0.004)DS(0.995)PPRPQPAFK;MEDLDQSPLVSS(0.001)S(0.017)DS(0.983)PPRPQPAFK;MEDLDQSPLVSSSDS(1)PPRPQPAFK;MEDLDQSPLVSSS(0.002)DS(0.998)PPRPQPAFK;MEDLDQSPLVSSSDS(1)PPRPQPAFK;MEDLDQSPLVSSS(0.001)DS(0.999)PPRPQPAFK;MEDLDQSPLVSSSDS(1)PPRPQPAFK;MEDLDQSPLVS(0.004)S(0.013)S(0.046)DS(0.936)PPRPQPAFK;MEDLDQSPLVSSS(0.004)DS(0.996)PPRPQPAFK;MEDLDQSPLVS(0.007)S(0.008)S(0.044)DS(0.94)PPRPQPAFK 140.71 2.5405e-48 19120300000.0 8779610.0 13723930.0 7701650.0 8953143.0 8417160.0 12724510.0 9415560.0 12392310.0 14202800.0 9841310.0 True False 8292587.531581371 13064611.802761082 8198110.682075686 9804047.018859401 9079542.604910795 12645091.613172686 10367376.69181029 12349323.968996892 11623929.543451946 9754123.649823315 0.850162231819932 1.3393937038103605 0.8404763950500244 1.0051181808667138 0.9308414503311386 1.2963841824377258 1.0628711572667098 1.2660618639195316 1.1916938887341766 1.0 23.217580830385284 -6.251088727656896 24.95615649962164 1.1737478965805734 1.0046091202816125 0.23286294529986218 0.15319322032754845 1040.8587889643038 2509586.817880574 0.04858195162332932 0.048080192314899926 5.609333639671773e-07 6.251088727656896 -0.1691387762989609 (ac)MEDS(ph)MDMDMS(ph)PLRPQNYLFGCELK ddPTM_KYSE-520_SHP099_60min_R1 12 MEDSMDMDMSPLRPQNYLFGCELK 24 1 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 2 MEDS(1)MDMDMS(0.983)PLRPQNY(0.017)LFGCELK;MEDS(0.997)MDMDMS(0.984)PLRPQNY(0.019)LFGCELK;MEDS(1)MDMDMS(0.992)PLRPQNY(0.008)LFGCELK;MEDS(0.999)MDMDMS(0.88)PLRPQNY(0.12)LFGCELK;MEDS(1)MDMDMS(0.981)PLRPQNY(0.02)LFGCELK;MEDS(0.996)MDMDMS(0.878)PLRPQNY(0.126)LFGCELK;MEDS(0.993)MDMDMS(0.979)PLRPQNY(0.028)LFGCELK;MEDS(1)MDMDMS(0.992)PLRPQNY(0.008)LFGCELK;MEDS(1)MDMDMS(0.998)PLRPQNY(0.003)LFGCELK;MEDS(1)MDMDMS(0.998)PLRPQNY(0.002)LFGCELK;MEDS(0.994)MDMDMS(0.864)PLRPQNY(0.142)LFGCELK;MEDS(0.994)MDMDMS(0.981)PLRPQNY(0.025)LFGCELK 81.373 8.4825e-05 468506000.0 460930.0 463151.0 410746.0 415254.0 416682.0 411210.0 369931.4 449971.0 539536.0 454714.0 True False 435361.2940588253 440900.53075617587 437223.3443768369 454719.61530933226 449472.50280372886 408643.48585939565 407327.67609454365 448410.15562502114 441569.8629957388 450685.58772213856 0.9659978173680558 0.9782885070378698 0.970129412361858 1.0089508688475763 0.9973083565317877 0.9067152289576582 0.9037956553109784 0.9949511762543419 0.9797736493583641 1.0 18.7817617899122 (ac)MEDS(ph)MDMDMSPLRPQNYLFGCELK ddPTM_KYSE-520_SHP099_60min_R1 68 MEDSMDMDMSPLRPQNYLFGCELK 24 1 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 1 MEDS(0.836)MDMDMS(0.16)PLRPQNY(0.005)LFGCELK;MEDS(0.843)MDMDMS(0.154)PLRPQNY(0.003)LFGCELK;MEDS(0.884)MDMDMS(0.111)PLRPQNY(0.005)LFGCELK;MEDS(0.962)MDMDMS(0.038)PLRPQNYLFGCELK;MEDS(0.806)MDMDMS(0.194)PLRPQNYLFGCELK;MEDS(0.914)MDMDMS(0.085)PLRPQNYLFGCELK;MEDS(0.499)MDMDMS(0.499)PLRPQNY(0.002)LFGCELK;MEDS(0.499)MDMDMS(0.499)PLRPQNY(0.001)LFGCELK;MEDS(0.832)MDMDMS(0.164)PLRPQNY(0.004)LFGCELK;MEDS(0.963)MDMDMS(0.036)PLRPQNYLFGCELK;MEDS(0.82)MDMDMS(0.177)PLRPQNY(0.004)LFGCELK;MEDS(0.979)MDMDMS(0.021)PLRPQNYLFGCELK;MEDS(0.872)MDMDMS(0.114)PLRPQNY(0.015)LFGCELK;MEDS(0.875)MDMDMS(0.119)PLRPQNY(0.006)LFGCELK;MEDS(0.91)MDMDMS(0.054)PLRPQNY(0.036)LFGCELK;MEDS(0.719)MDMDMS(0.259)PLRPQNY(0.022)LFGCELK;MEDS(0.992)MDMDMS(0.008)PLRPQNYLFGCELK;MEDS(0.949)MDMDMS(0.051)PLRPQNYLFGCELK;MEDS(0.585)MDMDMS(0.404)PLRPQNY(0.011)LFGCELK;MEDS(0.962)MDMDMS(0.038)PLRPQNYLFGCELK;MEDS(0.993)MDMDMS(0.007)PLRPQNYLFGCELK;MEDS(0.962)MDMDMS(0.037)PLRPQNYLFGCELK;MEDS(0.499)MDMDMS(0.499)PLRPQNY(0.003)LFGCELK;MEDS(0.987)MDMDMS(0.013)PLRPQNYLFGCELK;MEDS(0.962)MDMDMS(0.038)PLRPQNYLFGCELK;MEDS(0.999)MDMDMS(0.001)PLRPQNYLFGCELK;MEDS(0.973)MDMDMS(0.026)PLRPQNY(0.001)LFGCELK;MEDS(0.425)MDMDMS(0.575)PLRPQNYLFGCELK;MEDS(0.968)MDMDMS(0.032)PLRPQNYLFGCELK;MEDS(0.717)MDMDMS(0.283)PLRPQNYLFGCELK;MEDS(0.936)MDMDMS(0.064)PLRPQNYLFGCELK;MEDS(0.858)MDMDMS(0.141)PLRPQNY(0.001)LFGCELK;MEDS(1)MDMDMSPLRPQNYLFGCELK;MEDS(0.968)MDMDMS(0.032)PLRPQNYLFGCELK;MEDS(0.839)MDMDMS(0.161)PLRPQNYLFGCELK;MEDS(0.925)MDMDMS(0.074)PLRPQNY(0.001)LFGCELK;MEDS(0.5)MDMDMS(0.5)PLRPQNY(0.001)LFGCELK;MEDS(0.983)MDMDMS(0.017)PLRPQNYLFGCELK;MEDS(0.989)MDMDMS(0.011)PLRPQNYLFGCELK;MEDS(0.984)MDMDMS(0.015)PLRPQNYLFGCELK;MEDS(1)MDMDMSPLRPQNYLFGCELK;MEDS(1)MDMDMSPLRPQNYLFGCELK;MEDS(0.999)MDMDMS(0.001)PLRPQNYLFGCELK;MEDS(0.995)MDMDMS(0.005)PLRPQNYLFGCELK;MEDS(0.883)MDMDMS(0.117)PLRPQNYLFGCELK;MEDS(0.999)MDMDMS(0.001)PLRPQNYLFGCELK;MEDS(0.643)MDMDMS(0.356)PLRPQNYLFGCELK;MEDS(0.925)MDMDMS(0.074)PLRPQNY(0.001)LFGCELK;MEDS(0.602)MDMDMS(0.396)PLRPQNY(0.002)LFGCELK;MEDS(0.888)MDMDMS(0.111)PLRPQNYLFGCELK;MEDS(0.511)MDMDMS(0.477)PLRPQNY(0.012)LFGCELK;MEDS(0.953)MDMDMS(0.047)PLRPQNYLFGCELK;MEDS(0.771)MDMDMS(0.209)PLRPQNY(0.02)LFGCELK;MEDS(0.976)MDMDMS(0.023)PLRPQNYLFGCELK;MEDS(0.648)MDMDMS(0.35)PLRPQNY(0.002)LFGCELK;MEDS(0.499)MDMDMS(0.499)PLRPQNY(0.002)LFGCELK;MEDS(0.994)MDMDMS(0.006)PLRPQNYLFGCELK;MEDS(0.968)MDMDMS(0.032)PLRPQNYLFGCELK;MEDS(0.98)MDMDMS(0.02)PLRPQNYLFGCELK;MEDS(0.979)MDMDMS(0.021)PLRPQNYLFGCELK;MEDS(0.995)MDMDMS(0.005)PLRPQNYLFGCELK;MEDS(0.97)MDMDMS(0.03)PLRPQNYLFGCELK;MEDS(0.985)MDMDMS(0.015)PLRPQNYLFGCELK;MEDS(0.5)MDMDMS(0.5)PLRPQNYLFGCELK;MEDS(0.987)MDMDMS(0.013)PLRPQNYLFGCELK;MEDS(0.998)MDMDMS(0.002)PLRPQNYLFGCELK;MEDS(0.988)MDMDMS(0.012)PLRPQNYLFGCELK;MEDS(0.999)MDMDMS(0.001)PLRPQNYLFGCELK 124.08 3.3652999999999998e-49 45151234000.0 19311878.0 23774878.0 17775629.0 15721899.0 15883999.0 20278850.0 16503556.0 20084712.0 25041225.0 21934420.0 True False 18240609.630065653 22632697.174060587 18921474.487351988 17216103.553998716 17133979.353708446 20152282.175092556 18171896.499664992 20015042.821879018 20494369.777911916 21740098.10352052 0.8390306954094117 1.041057729651897 0.8703490847765727 0.7919055135823327 0.7881279685179445 0.9269637183389324 0.8358700321008347 0.9206509890881241 0.9426990476456555 1.0 24.373855114840936 -7.835696034085337 1.6275599337457471 0.9972292385719267 0.8729288925085226 0.2640270975620276 0.0694810200862866 0.5285432789994424 2.935317958412505 0.06967978563381053 0.020676650631108375 1.4598356525461275e-08 7.835696034085337 -0.12430034606340412 (ac)MEDSMDMDMS(ph)PLRPQNYLFGCELK ddPTM_KYSE-520_SHP099_60min_R1 12 MEDSMDMDMSPLRPQNYLFGCELK 24 1 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 1 MEDS(0.468)MDMDMS(0.53)PLRPQNY(0.002)LFGCELK;MEDS(0.483)MDMDMS(0.509)PLRPQNY(0.008)LFGCELK;MEDS(0.318)MDMDMS(0.682)PLRPQNYLFGCELK;MEDS(0.111)MDMDMS(0.889)PLRPQNYLFGCELK;MEDS(0.466)MDMDMS(0.532)PLRPQNY(0.002)LFGCELK;MEDS(0.101)MDMDMS(0.899)PLRPQNYLFGCELK;MEDS(0.003)MDMDMS(0.949)PLRPQNY(0.049)LFGCELK;MEDS(0.013)MDMDMS(0.971)PLRPQNY(0.016)LFGCELK;MEDS(0.001)MDMDMS(0.999)PLRPQNYLFGCELK;MEDS(0.483)MDMDMS(0.506)PLRPQNY(0.011)LFGCELK;MEDS(0.465)MDMDMS(0.533)PLRPQNY(0.002)LFGCELK;MEDS(0.467)MDMDMS(0.531)PLRPQNY(0.002)LFGCELK 132.91 7.763299999999998e-61 8307689500.0 3830162.6 4941082.0 3315723.0 2889106.8 2986232.3 3909719.1 2935888.4 4002795.0 4576627.0 3972454.6 True False 3617695.845338152 4703705.004004712 3529459.809924379 3163686.64163037 3221231.7926724404 3885317.0928602344 3232676.650981585 3988910.2384043774 3745626.9041780345 3937261.742766909 0.9188354957564537 1.1946640358990168 0.8964249878505798 0.8035245935686995 0.8181401194853561 0.986806909649301 0.8210469260572509 1.0131178720165992 0.9513278895057145 1.0 21.90876119303269 -4.805488779600027 24.999208058131927 0.9040643057537842 1.056750157322513 0.26513615994141926 0.09625938605250756 141.21305513183714 80141.67579373978 0.024646638829521936 0.05130650037105063 1.564988751635697e-05 4.805488779600027 0.15268585156872894 (ac)MEFDLGAALEPTSQKPGVGAGHGGDPKLS(ph)PHK ddPTM_KYSE-520_SHP099_60min_R1 23 MEFDLGAALEPTSQKPGVGAGHGGDPKLSPHK 32 2 Q9GZP8;Q9GZP8-2 Q9GZP8 IMUP Immortalization up-regulated protein 1 MEFDLGAALEPT(0.027)S(0.027)QKPGVGAGHGGDPKLS(0.946)PHK;MEFDLGAALEPTS(0.001)QKPGVGAGHGGDPKLS(0.999)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPT(0.005)S(0.005)QKPGVGAGHGGDPKLS(0.99)PHK;MEFDLGAALEPT(0.007)S(0.007)QKPGVGAGHGGDPKLS(0.987)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPT(0.002)S(0.003)QKPGVGAGHGGDPKLS(0.995)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPT(0.001)S(0.002)QKPGVGAGHGGDPKLS(0.998)PHK;MEFDLGAALEPT(0.001)S(0.001)QKPGVGAGHGGDPKLS(0.999)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(0.999)PHK;MEFDLGAALEPT(0.022)S(0.061)QKPGVGAGHGGDPKLS(0.918)PHK;MEFDLGAALEPT(0.002)S(0.002)QKPGVGAGHGGDPKLS(0.996)PHK;MEFDLGAALEPT(0.003)S(0.014)QKPGVGAGHGGDPKLS(0.982)PHK;MEFDLGAALEPT(0.003)S(0.037)QKPGVGAGHGGDPKLS(0.96)PHK;MEFDLGAALEPT(0.001)S(0.003)QKPGVGAGHGGDPKLS(0.997)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHK 156.18 1.8664999999999997e-31 180961880000.0 27056111.0 32039104.0 30848026.0 31192942.0 24915633.0 25117674.0 25144094.0 26714781.0 39766740.0 27709350.0 True False 25555254.587809894 30499897.35216442 32836539.114546765 34157509.82918004 26876351.566540446 24960905.279637937 27685904.404229466 26622113.65998778 32546102.453936674 27463866.716548096 0.9305046099867581 1.1105463650457854 1.1956269469790797 1.24372544411595 0.9786077045861263 0.908863472767947 1.0080847205520256 0.9693505264481521 1.1850517186761005 1.0 24.711031425168656 -5.797592213039431 24.99810214116088 1.0018085937054846 1.1248133142008054 0.2269472937076118 0.10048156240064421 252.10660129248646 174319.3837219431 0.03245782635539057 0.036804904381429825 1.59370445611553e-06 5.797592213039431 0.12300472049532085 (ac)MEFDLGAALEPTSQKPGVGAGHGGDPKLS(ph)PHKVQGR ddPTM_KYSE-520_SHP099_60min_R1 13 MEFDLGAALEPTSQKPGVGAGHGGDPKLSPHKVQGR 36 3 Q9GZP8;Q9GZP8-2 Q9GZP8 IMUP Immortalization up-regulated protein 1 MEFDLGAALEPT(0.001)S(0.005)QKPGVGAGHGGDPKLS(0.994)PHKVQGR;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHKVQGR;MEFDLGAALEPT(0.073)S(0.073)QKPGVGAGHGGDPKLS(0.853)PHKVQGR;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHKVQGR;MEFDLGAALEPT(0.223)S(0.06)QKPGVGAGHGGDPKLS(0.718)PHKVQGR;MEFDLGAALEPT(0.008)S(0.008)QKPGVGAGHGGDPKLS(0.983)PHKVQGR;MEFDLGAALEPT(0.002)S(0.002)QKPGVGAGHGGDPKLS(0.997)PHKVQGR;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHKVQGR;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(0.999)PHKVQGR;MEFDLGAALEPT(0.001)S(0.003)QKPGVGAGHGGDPKLS(0.996)PHKVQGR;MEFDLGAALEPTSQKPGVGAGHGGDPKLS(1)PHKVQGR;MEFDLGAALEPT(0.258)S(0.21)QKPGVGAGHGGDPKLS(0.532)PHKVQGR;MEFDLGAALEPT(0.031)S(0.031)QKPGVGAGHGGDPKLS(0.937)PHKVQGR 148.47 7.8079e-32 70547710000.0 14995740.0 19391286.0 19080725.0 18458425.0 13797505.0 12862106.0 11246973.0 11811745.0 22661318.0 10406454.0 True False 14163896.40893342 18459699.51364629 20310699.06373944 20212708.162272178 14883290.146435328 12781828.825498017 12383926.790718706 11770772.813477 18546593.896538675 10314260.913658693 1.3732342557067598 1.7897258628779666 1.9691860845640363 1.9596855588077506 1.442981738684357 1.2392384614365959 1.2006606090717806 1.1412134046259694 1.7981505462963698 1.0 23.29813711031219 -5.9328087426185325 4.988485957618738 1.2851882628797038 1.7858202290785528 0.4736200628529781 0.24701729380422652 0.1820376607143988 8.742670888922818 0.07858161414347373 0.08906759243380961 1.1673235773046887e-06 5.9328087426185325 0.500631966198849 (ac)MEGISNFKT(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 2 MEGISNFKTPSK 12 1 Q96KB5;Q96KB5-2;E5RIE1 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 MEGIS(0.005)NFKT(0.979)PS(0.015)K;MEGIS(0.226)NFKT(0.684)PS(0.09)K 53.251999999999995 0.0058973 2542870000.0 1862500.0 2785100.0 1827610.0 1717720.0 1695980.0 2273930.0 1692050.0 2029060.0 2643800.0 2535170.0 True False 1759183.4121983 2651299.61547967 1945420.6648793917 1880971.5923486492 1829443.9771938059 2259737.5593984965 1863098.9268166302 2022021.6644461628 2163752.564774427 2512710.3661324163 0.7001138833625496 1.055155282206509 0.7742319572923156 0.7485827326942801 0.7280759461384722 0.8993227352648298 0.7414698295229015 0.8047173648423612 0.8611229507143285 1.0 21.26081295426102 -8.138575470058722 2.9941592048673127 0.9998973672425506 0.8103584624588381 0.2607516049362707 0.09834324119643782 0.8154691058514455 13.883556628724524 0.09309449653442808 0.02485016551649427 7.268160848785042e-09 8.138575470058722 -0.1895389047837125 (ac)MEQLS(ph)DEEIDHGAEEDS(ph)DKEDQDLDK ddPTM_KYSE-520_SHP099_60min_R1 2 MEQLSDEEIDHGAEEDSDKEDQDLDK 26 1 C9K0J5;Q70E73;C9J0R8;C9JLG4;C9J164;Q70E73-5;Q70E73-2;Q70E73-8;Q70E73-7;Q70E73-4;Q70E73-3;Q70E73-9;Q70E73-6 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 2 MEQLS(1)DEEIDHGAEEDS(1)DKEDQDLDK;MEQLS(1)DEEIDHGAEEDS(1)DKEDQDLDK 111.33 3.2968e-29 1753520000.0 1714570.0 1662320.0 1361950.0 1433900.0 1650450.0 1711970.0 1594540.0 1631790.0 1846270.0 1607600.0 True False 1619459.3841894413 1582459.6520068122 1449743.4761970479 1570177.4248822457 1780331.0252240703 1701284.9602069717 1755731.6644107385 1626129.7013526508 1511033.9086792048 1593357.914693875 1.0163814226890642 0.993160191701714 0.9098668057111203 0.9854517998763116 1.117345330139536 1.0677355944435323 1.1019066389412322 1.0205677496289791 0.9483330108976257 1.0 20.603638944005734 -5.548134793929259 24.73441675015517 1.0482124013665772 0.97055866018434 0.27703028087692794 0.05234710985627586 243.88769170121222 238848.96188182192 0.016258940769020108 0.02099101962899517 2.8305133403098166e-06 5.548134793929259 -0.07765374118223722 (ac)MERPEEGKQS(ph)PPPQPWGR ddPTM_KYSE-520_SHP099_60min_R1 2 MERPEEGKQSPPPQPWGR 18 2 F5GWH4;Q96EP1-5;Q96EP1-3;Q96EP1-2;Q96EP1-4;Q96EP1 F5GWH4 CHFR E3 ubiquitin-protein ligase CHFR 1 MERPEEGKQS(1)PPPQPWGR;MERPEEGKQS(1)PPPQPWGR 69.765 4.8904e-06 1146150000.0 584460.0 587300.0 468610.0 461430.0 485130.0 499830.0 427460.0 518350.0 624690.0 476100.0 True False 552038.8387078752 559085.226444728 498817.3504025095 505284.1684660124 523306.9709878836 496710.37556747545 470671.82840757456 516551.9648337994 511262.0431533919 471882.1244001953 1.16986596898445 1.1847984857561105 1.0570804118434265 1.0707847200363314 1.1089781619785954 1.052615367023786 0.9974351730442022 1.0946631332780055 1.0834528724800754 1.0 18.848066995503327 -4.762379442940449 24.999765735072977 1.0614109222652577 1.1773322610120327 0.6534159832897897 0.034661034925853526 14.185890219779228 377305.87274017907 0.00911649104469561 0.0209104574843758 1.7283056792894657e-05 4.762379442940449 0.11592133874677502 (ac)METMAS(ph)PGKDNYR ddPTM_KYSE-520_SHP099_60min_R1 2 METMASPGKDNYR 13 1 S4R3E5;O60684 S4R3E5 KPNA6 Importin subunit alpha-7 1 METMAS(1)PGKDNYR;MET(0.032)MAS(0.968)PGKDNYR 71.806 1.4891e-06 3869200000.0 2438190.0 2559440.0 2045120.0 1833330.0 1910720.0 2224800.0 1823450.0 2072610.0 2633750.0 2273410.0 True False 2302938.740288736 2436480.660602238 2176951.707507694 2007569.131989237 2061082.793490342 2210914.197952341 2007782.121157045 2065420.5996608096 2155527.391434542 2253269.3560862155 1.0220432519833282 1.081309100494869 0.9661302594062344 0.8909583430701139 0.9147076837144366 0.9812027984938991 0.8910528675739122 0.9166328002828357 0.9566221568727828 1.0 21.103588353142666 -4.907969267371458 4.905907628723933 0.9313037140414189 1.0502655455049885 0.6047285442277068 0.03669926365614056 0.1198708938464321 4.859839152508843 0.00933216577127264 0.020313872680712292 1.2360348977318553e-05 4.907969267371458 0.11896183146356964 (ac)MEVKPPPGRPQPDS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 7 MEVKPPPGRPQPDSGR 16 2 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 MEVKPPPGRPQPDS(1)GR;MEVKPPPGRPQPDS(1)GR;MEVKPPPGRPQPDS(1)GR;MEVKPPPGRPQPDS(1)GR;MEVKPPPGRPQPDS(1)GR;MEVKPPPGRPQPDS(1)GR;MEVKPPPGRPQPDS(1)GR 74.77600000000001 4.848e-05 17593000000.0 3608850.0 3219300.0 3081000.0 3266160.0 3009240.0 3136920.0 2808890.0 3185500.0 3944050.0 3090940.0 True False 3408659.8964358843 3064639.9957321845 3279606.1897742967 3576574.864393186 3246050.0677665323 3117341.318698609 3092840.0133246435 3174450.2440012926 3227909.941409558 3063556.6763149295 1.1126478980425034 1.0003536149422763 1.0705224470399703 1.1674583636870568 1.0595691252792878 1.0175562746397027 1.0095586078873977 1.0361976550144174 1.0536478617697143 1.0 21.546776110987754 -6.005052680010031 24.996050219600406 1.026320152885442 1.0844281524781758 0.3524054632188953 0.04104526847329222 300.2505833693225 1485376.1010302359 0.013613905611429547 0.01502514255583517 9.8843319023548e-07 6.005052680010031 0.05810799959273383 (ac)MHGHGGYDS(ph)DFS(ph)DDER ddPTM_KYSE-520_SHP099_60min_R1 1 MHGHGGYDSDFSDDER 16 0 Q70Z53;Q70Z53-2;Q70Z53-4;Q70Z53-5;Q70Z53-3 Q70Z53 FRA10AC1 Protein FRA10AC1 2 MHGHGGY(0.095)DS(0.915)DFS(0.99)DDER 41.513000000000005 0.00059206 614960000.0 281500.0 316400.0 340950.0 338440.0 288710.0 258290.0 252270.0 241030.0 340180.0 230290.0 True False 265884.63384366233 301199.6690739177 362928.18253928795 370605.2358443034 311429.83446480683 256677.91630218938 277771.9135179407 240193.9231868248 278411.8872399445 228249.80976290882 1.1648843612174142 1.319605345506244 1.5900481271650317 1.62368256179168 1.3644253845744716 1.1245482156975721 1.216964490820265 1.0523291276182125 1.219768321073918 1.0 17.80025413221817 -6.190438517147541 4.1262253601845185 1.130820350551341 1.4349708465816453 0.531538612074208 0.13631658511654404 0.19907459178753376 6.598936044576031 0.05014293245343798 0.049485440808359406 6.450026261038479e-07 6.190438517147541 0.3041504960303043 (ac)MHRDS(ph)CPLDCK ddPTM_KYSE-520_SHP099_60min_R1 1 MHRDSCPLDCK 11 1 P84103;P84103-2;A0A087X2D0 P84103 SRSF3 Serine/arginine-rich splicing factor 3 1 MHRDS(1)CPLDCK 52.693000000000005 0.00016254 436330000.0 222820.0 193190.0 196520.0 179670.0 213160.0 255830.0 195890.0 192890.0 248800.0 200370.0 True False 210459.73041934226 183908.8624158981 209187.99364311725 196745.78278024463 229934.47928550543 254233.2700746796 215692.4729021654 192220.90961086456 203624.1917376042 198594.87768550107 1.0597440018197781 0.9260503823625298 1.053340328215271 0.9906891107826824 1.1578066965535456 1.2801602591044097 1.0860928308722062 0.967904670307104 1.0253244902925829 1.0 17.59946888666348 -3.875696933444507 11.699061882216267 1.0583532788430987 1.0974203581149806 0.0 0.0972848336204886 49707030.20600056 74257158.69319205 0.0268488047483332 49733500.576100424 0.0001331383181701203 3.875696933444507 0.03906707927188191 (ac)MNLLPNIES(ph)PVTR ddPTM_KYSE-520_SHP099_60min_R1 1 MNLLPNIESPVTR 13 0 E9PM69;P17980 E9PM69 PSMC3 26S protease regulatory subunit 6A 1 MNLLPNIES(0.808)PVT(0.192)R 48.44 0.0020094 54179000.0 5522.3 6758.0 8208.9 13064.0 6529.7 4545.6 7062.0 6971.7 10075.0 3637.5 True False 5215.967010567875 6433.335536035196 8738.058828704392 14305.598632165182 7043.550241089153 4517.229224295294 7775.8958784782 6947.516799907009 8245.633970081839 3605.2745799321765 1.446759988712427 1.7844231814810128 2.4236874709467413 3.9679636918068812 1.9536792787698458 1.2529501218684636 2.1568110017918474 1.9270423502771619 2.2871029063858317 1.0 11.815893424855272 -5.981513969307515 24.998492578796387 1.7867884569501014 2.437390804321557 0.16662797584389333 0.7114407287497873 492.9347698725371 666587.9143407114 0.23411856104110654 0.26542518196056564 1.043484567965862e-06 5.981513969307515 0.6506023473714557 (ac)MNTAPSRPS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 4 MNTAPSRPSPTR 12 1 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNTAPS(0.05)RPS(0.914)PT(0.036)R;MNTAPS(0.042)RPS(0.794)PT(0.163)R;MNTAPS(0.086)RPS(0.877)PT(0.038)R;MNTAPS(0.015)RPS(0.881)PT(0.104)R 96.756 1.0218e-07 13590000000.0 661049.0 671147.0 618890.0 508607.0 531103.0 566049.0 564517.0 513393.0 735947.0 505567.0 True False 624379.2942014891 638904.0907078143 658784.6396590113 556944.85636173 572897.7845372945 562516.0782257844 621583.8875149918 511612.1595098265 602317.5765141256 501088.0697051747 1.2460470163834778 1.2750335306999554 1.314708290793314 1.1114709968836811 1.1433075724081208 1.1225892457522528 1.2404683429815306 1.021002475295099 1.2020193912589283 1.0 18.934704663806627 -1.0000000296478158 0.09440188305887565 0.9088963172853488 1.9835414422116797 0.5013278338713838 0.07103155928510047 116.49430213560079 0.787497096385333 1.1027063834329833 16.202493634042654 0.09999999317333837 1.0000000296478158 1.074645124926331 (ac)MNTAPSRPS(ph)PTRR ddPTM_KYSE-520_SHP099_60min_R1 3 MNTAPSRPSPTRR 13 2 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNTAPS(0.012)RPS(0.494)PT(0.494)RR;MNT(0.001)APS(0.128)RPS(0.435)PT(0.435)RR;MNTAPS(0.129)RPS(0.436)PT(0.436)RR 57.148 0.0019903 5744000000.0 149532.0 138732.0 213903.0 155001.0 140838.0 155937.0 122710.0 141803.0 172228.0 128131.0 True False 141237.16187534825 132067.1064790226 227691.52963690073 169732.24843725006 151921.14934139603 154963.73934110685 135114.72433419136 141311.11849006906 140955.73671456613 126995.85902440964 1.1121398993663354 1.0399323843593846 1.792905149711508 1.3365179757918417 1.1962685280328356 1.2202267107884326 1.0639301578189349 1.1127222539036326 1.1099238809627114 1.0 16.954421929998443 -6.3670242887043935 1.6156891247019365 1.0804452249127763 1.3234089405917433 0.23546494664959716 0.191198881179091 0.6227550499096101 3.2376325119565847 0.09284884530436419 0.07790413817532078 4.295124048350743e-07 6.3670242887043935 0.24296371567896702 (ac)MNTAPSRPSPT(ph)RR ddPTM_KYSE-520_SHP099_60min_R1 1 MNTAPSRPSPTRR 13 2 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 MNTAPS(0.006)RPS(0.405)PT(0.589)RR 67.646 0.00011096 929590000.0 63107.0 35478.0 76428.0 53961.0 29077.0 53059.0 42108.0 41646.0 43094.0 58997.0 True False 59606.32890931437 33773.58362643632 81354.67116912357 59089.43721603376 31365.194474501022 52727.83909976329 46364.687574477495 41501.53974624946 35269.21591133564 58474.33247897146 1.0193588602443644 0.5775796352798379 1.3912885828731836 1.0105192263166665 0.5363925186453488 0.9017262252412248 0.7929066585095463 0.709739435865715 0.6031572215727158 1.0 15.83551586695615 -5.720786877409192 24.964617500899745 0.7518067950352989 0.9975080095813208 0.22386122144172682 0.22092631932456833 233.11096862604344 143151.84381668703 0.06483692184032662 0.08370313869666914 1.9020114305269514e-06 5.720786877409192 0.2457012145460219 (ac)MNVDHEVNLLVEEIHR ddPTM_KYSE-520_SHP099_60min_R1 5 MNVDHEVNLLVEEIHR 16 0 Q5SZC9;Q9P1F3 Q5SZC9 ABRACL Costars family protein ABRACL 0 ;;;; 90.348 3.2176e-12 276934000.0 28519.399999999998 19925.39 14562.869999999999 15746.25 21722.010000000002 23523.600000000002 20707.940000000002 21052.699999999997 23967.299999999996 17959.81 False True 26937.3720299856 18968.144355779863 15501.615901615844 17242.7688657173 23431.408605669643 23376.780486763648 22801.300665218612 20979.673097437117 19615.442486465734 17800.700055920748 1.513275991694825 1.065584179059902 0.8708430484709955 0.9686567838090236 1.3163195004724573 1.313250625724027 1.280921570139855 1.178586967452384 1.1019478124368136 1.0 14.119646359356024 -5.766046572677091 24.99475754520836 1.2172919155735382 1.0851076647134499 0.05069996756344952 0.18117970646530965 288.6596885136473 1566022.580076255 0.05789281958297204 0.06782117585387154 1.7137735167773281e-06 5.766046572677091 -0.13218425086008834 (ac)MNYEGS(ph)PIKVTLATLK ddPTM_KYSE-520_SHP099_60min_R1 3 MNYEGSPIKVTLATLK 16 1 E5RI98 E5RI98 NPM1 1 MNY(0.461)EGS(0.536)PIKVT(0.003)LATLK;MNY(0.451)EGS(0.548)PIKVTLATLK;MNY(0.459)EGS(0.539)PIKVT(0.003)LATLK 65.395 1.7507e-08 431960000.0 494157.0 650980.0 398632.0 368561.0 383659.0 556300.0 400744.0 436154.0 581040.0 463417.0 True False 466745.1261324427 619705.9436590992 424328.45655375137 403588.9266280952 413850.78057889733 552827.9253509926 441255.1144045411 434641.08357310935 475537.7828264367 459311.4859129707 1.0161843116217661 1.3492062852016717 0.9238359361084042 0.8786824170658043 0.9010242357782293 1.2036013518193212 0.9606881777133462 0.9462882965122805 1.0353274355445587 1.0 18.80911333564098 -4.782651823680061 24.999351246391917 0.9799509804360461 1.1826954576097344 0.33306575691212514 0.11405165913971349 229.48858645823717 270457.4836870445 0.02972622739105922 0.061975028698947464 1.6494842623559647e-05 4.782651823680061 0.20274447717368826 (ac)MS(ph)GDEMIFDPTMSK ddPTM_KYSE-520_SHP099_60min_R1 4 MSGDEMIFDPTMSK 14 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 MS(1)GDEMIFDPTMSK;MS(1)GDEMIFDPTMSK;MS(1)GDEMIFDPTMSK;MS(1)GDEMIFDPTMSK 68.03399999999999 2.4956999999999997e-13 216927000.0 573833.0 746706.0 510551.0 414963.0 515610.0 644818.0 488155.0 602291.0 734540.0 690972.0 True False 542001.3395822744 710833.1229314428 543461.9343704826 454400.95875682484 556185.5735804068 640793.4516789074 537502.4713336913 600201.7930967768 601166.0522465415 684850.5256480819 0.7914155268689796 1.0379390776677484 0.7935482474167604 0.6635038475393152 0.8121269572715624 0.9356690659943894 0.7848464025417028 0.8763982367229681 0.8778062215512664 1.0 19.385429616615376 -8.350337852560973 0.9613537336104043 1.00021312746984 0.8333936834786656 0.22074411703341312 0.09390985287068397 2.0053999340767983 3.2848715805560973 0.0959095860421095 0.03140815466768234 4.4633623680387955e-09 8.350337852560973 -0.16681944399117443 (ac)MSPRTS(ph)LAEDSCLGR ddPTM_KYSE-520_SHP099_60min_R1 1 MSPRTSLAEDSCLGR 15 1 Q13469-5 Q13469-5 1 MSPRT(0.001)S(0.924)LAEDS(0.076)CLGR 45.992 0.019576 11620000000.0 1100400.0 1171200.0 1030600.0 1565100.0 1278700.0 698910.0 848350.0 1099200.0 1320100.0 741780.0 True False 1039358.6184069854 1114933.7939929587 1097034.1250183024 1713846.6334355266 1379326.41519223 694547.8434424998 934109.497098128 1095387.1317552074 1080403.1170129061 735208.4062961082 1.4136925115466914 1.5164867328025553 1.4921403450009894 2.3311031521928327 1.8761026171356108 0.944695187778862 1.2705370192977794 1.4899001730320747 1.469519537264063 1.0 19.48779373678244 -6.247144856584639 24.976136628152652 1.2677745466019283 1.7349059153575197 0.41213172772592865 0.2917772849601823 932.9168137802093 1630041.7503112594 0.10495661476887738 0.10449514964609415 5.660504544681858e-07 6.247144856584639 0.46713136875559136 (ac)MVDYSVWDHIEVS(ph)DDEDETHPNIDTASLFR ddPTM_KYSE-520_SHP099_60min_R1 22 MVDYSVWDHIEVSDDEDETHPNIDTASLFR 30 0 Q16543;K7EKQ2;K7EQA9;K7EJ06 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed 1 MVDY(0.039)S(0.041)VWDHIEVS(0.91)DDEDET(0.009)HPNIDT(0.001)ASLFR;MVDY(0.173)S(0.173)VWDHIEVS(0.653)DDEDET(0.002)HPNIDTASLFR;MVDY(0.001)S(0.008)VWDHIEVS(0.885)DDEDET(0.097)HPNIDT(0.004)AS(0.005)LFR;MVDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;MVDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;MVDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;MVDYSVWDHIEVS(0.999)DDEDET(0.001)HPNIDTASLFR;MVDY(0.005)S(0.006)VWDHIEVS(0.974)DDEDET(0.015)HPNIDTASLFR;MVDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;MVDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;MVDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;MVDYS(0.001)VWDHIEVS(0.998)DDEDETHPNIDTASLFR;MVDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;MVDY(0.006)S(0.006)VWDHIEVS(0.982)DDEDET(0.005)HPNIDTASLFR;MVDY(0.024)S(0.026)VWDHIEVS(0.919)DDEDET(0.028)HPNIDT(0.001)AS(0.001)LFR;MVDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;MVDY(0.135)S(0.146)VWDHIEVS(0.714)DDEDET(0.005)HPNIDTASLFR;MVDY(0.023)S(0.024)VWDHIEVS(0.947)DDEDET(0.005)HPNIDTASLFR;MVDYS(0.003)VWDHIEVS(0.996)DDEDETHPNIDTASLFR;MVDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;MVDY(0.006)S(0.007)VWDHIEVS(0.983)DDEDET(0.003)HPNIDTASLFR;MVDYS(0.001)VWDHIEVS(0.97)DDEDET(0.027)HPNIDT(0.001)AS(0.001)LFR 229.22 3.846699999999999e-125 5945878000.0 180808.30000000002 406158.50000000006 308798.30000000005 232510.59999999995 335303.0 253380.00000000003 282542.1 309822.4000000001 498971.60000000003 217140.59999999998 True False 170778.50316658986 386646.03600366256 328703.9325127496 254608.33751713898 361689.4384869007 251798.5614334615 311104.21281316574 308747.6984074919 408370.9354904299 215216.9032168303 0.7935180769445934 1.7965412113291026 1.5273146653429053 1.1830313219432487 1.6805810002874162 1.1699757670975095 1.4455380045113337 1.4345885188043508 1.8974854176718525 1.0 17.715431866594457 -7.2988475511323125 3.8656589176466665 1.5051989261712584 1.3892680309527747 0.0 0.3361936792131442 1.222973821845309 39.738474302691536 0.1851846842826472 0.0862311081046492 5.025189560313029e-08 7.2988475511323125 -0.11593089521848365 (ac)S(ph)AIQNLHSFDPFADASK ddPTM_KYSE-520_SHP099_60min_R1 3 SAIQNLHSFDPFADASK 17 0 K7EM18;P41567 K7EM18 EIF1 Eukaryotic translation initiation factor 1 1 S(0.996)AIQNLHS(0.004)FDPFADASK;S(1)AIQNLHSFDPFADASK;S(0.999)AIQNLHS(0.001)FDPFADASK 89.62899999999999 1.8238e-05 118345000.0 294657.0 242844.0 209382.0 212744.0 207391.0 247993.0 217798.0 251873.0 255318.0 267466.0 True False 278311.7888258333 231177.4097237246 222879.09874304535 232963.1257961838 223711.4918066253 246445.18369866774 239815.14734364118 250999.31135060027 208958.68724301286 265096.45932539913 1.0498510222809603 0.8720501598248818 0.840747172973242 0.8787862591187139 0.8438871359350189 0.9296434374333252 0.9046335358605232 0.9468225716379902 0.7882364320321661 1.0 18.016157875883778 (ac)S(ph)ASSLLEQRPK ddPTM_KYSE-520_SHP099_60min_R1 1 SASSLLEQRPK 11 1 Q9Y5A9;S4R3J8;S4R3V3 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 1 S(0.333)AS(0.333)S(0.333)LLEQRPK 49.536 0.019739 850540000.0 1236900.0 1070600.0 882380.0 771100.0 892200.0 984940.0 944060.0 1030400.0 1117500.0 1043700.0 True False 1168286.6913009798 1019166.7689966386 939259.6266579187 844385.1121603313 962411.0640764111 978792.6241150578 1039494.7979377126 1026825.7828971675 914590.1698825259 1034453.6299863121 1.1293756021876384 0.9852222849371453 0.9079765389487269 0.8162619257970067 0.9303568919654192 0.9461928459064995 1.004873266239558 0.9926262068515864 0.8841287259000945 1.0 19.980437546288034 -4.317247946540224 2.945157186543836 0.9338609873932249 1.1501627563588308 0.5294307867503459 0.05496168818573615 0.2808540526853546 3.7423108173114445 0.015298894390962036 0.13380782348994383 4.8167272347870975e-05 4.317247946540224 0.21630176896560593 (ac)S(ph)DAAVDTSSEITTK ddPTM_KYSE-520_SHP099_60min_R1 3 SDAAVDTSSEITTK 14 0 B8ZZQ6;P06454-2;P06454 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 1 S(1)DAAVDTSSEITTK;S(0.837)DAAVDT(0.151)S(0.011)S(0.001)EITTK;S(0.983)DAAVDT(0.007)S(0.009)S(0.001)EITTK 78.096 6.4973e-18 2660490000.0 4926240.0 6225640.0 5234110.0 3630740.0 4363570.0 5709080.0 4319360.0 5273400.0 6931590.0 6020060.0 True False 4652971.646984029 5926550.909523849 5571509.1054721 3975804.437978214 4706958.133682923 5673447.514044301 4756003.061691242 5255107.806220817 5672987.987164228 5966726.951935806 0.7798197712859055 0.9932666531021799 0.9337630413378504 0.6663292069512801 0.7888676943991594 0.9508475182031991 0.7970874316861836 0.8807354263992061 0.9507705033031084 1.0 22.5085083274301 -7.819289598198551 2.3983176315586885 0.9975776552974978 0.8479197668379452 0.2497537414439771 0.09112341279344352 0.4232915147257486 4.742948934736556 0.09015330930617257 0.025319264891152625 1.5160390983212443e-08 7.819289598198551 -0.14965788845955252 (ac)S(ph)DFDSNPFADPDLNNPFKDPSVTQVTR ddPTM_KYSE-520_SHP099_60min_R1 3 SDFDSNPFADPDLNNPFKDPSVTQVTR 27 1 O15126-2;O15126 O15126-2 SCAMP1 Secretory carrier-associated membrane protein 1 1 S(0.5)DFDS(0.5)NPFADPDLNNPFKDPSVTQVTR;S(0.5)DFDS(0.5)NPFADPDLNNPFKDPSVTQVTR;S(0.92)DFDS(0.08)NPFADPDLNNPFKDPSVTQVTR 62.677 9.317299999999999e-07 196669000.0 109946.0 126530.0 105145.0 100597.0 115178.0 113472.0 106028.0 115341.0 142036.0 116445.0 True False 103847.07620808273 120451.30887459793 111922.8149379482 110157.70863440906 124241.85332682455 112763.77915769884 116746.3449735608 114940.90899179167 116245.842836183 115413.387892839 0.8997836221955847 1.0436510969285178 0.9697559094432633 0.954462135161392 1.07649429234486 0.9770424490302605 1.0115494147174628 0.9959062036937515 1.0072128109099174 1.0 16.816451060000094 -4.246590959611142 24.429857495042036 1.0029197910645038 0.8997835219007568 0.4626970591936538 0.03367564151320657 1799.4306814495249 2960507.5259892875 0.008113382992422409 0.1761214972096019 5.667728529127398e-05 4.246590959611142 -0.10313626916374696 (ac)S(ph)DKPDMAEIEK ddPTM_KYSE-520_SHP099_60min_R1 2 SDKPDMAEIEK 11 1 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 S(1)DKPDMAEIEK;S(1)DKPDMAEIEK 70.1 0.00034198 806910000.0 1845450.0 1588620.0 1331820.0 1461680.0 1644230.0 1553500.0 1526330.0 1709760.0 1812170.0 1506060.0 True False 1743079.2096866325 1512300.3106327655 1417671.2481873431 1600597.6277298825 1773621.546611029 1543804.030258434 1680626.3319452885 1703829.241620982 1483125.6090881592 1492717.4800969504 1.1677221128095996 1.0131189128531832 0.9497250933882457 1.0722709749643484 1.1881830086801382 1.0342238573893872 1.1258837351031312 1.1414278082348979 0.99357422209046 1.0 20.509509708251407 -4.240673568941493 22.9259867741948 1.064591794897881 1.1677224318799118 0.1704500676952979 0.07139738115292854 3290.746694577619 3632891.6484492226 0.018550235475679216 0.6886112484375726 5.745481506162352e-05 4.240673568941493 0.10313063698203084 (ac)S(ph)DKPDMAEIEKFDK ddPTM_KYSE-520_SHP099_60min_R1 4 SDKPDMAEIEKFDK 14 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 1 S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK;S(1)DKPDMAEIEKFDK 100.69 3.7646e-05 1392550000.0 3165560.0 3064580.0 2818670.0 2574010.0 2839040.0 2741890.0 2476010.0 2569450.0 3618460.0 2661680.0 True False 2989960.076412589 2917352.9767716387 3000365.978231456 2818643.1364956754 3062456.296072062 2724776.847457548 2726309.2543289135 2560537.1776641384 2961438.8779535824 2638099.5859557036 1.1333765003906844 1.1058539989553768 1.1373209693084858 1.0684369731533718 1.160856971577374 1.032855947502241 1.0334368227957755 0.9705991355654352 1.1225652335943728 1.0 21.331067595419565 -6.2829592203958855 22.915450253443982 1.0301504228627731 1.1182860014020746 0.5239112798619946 0.042492167820417155 220.35437722183798 234643.41598146647 0.014056567922514697 0.012413369596607111 5.212436528088486e-07 6.2829592203958855 0.08813557853930143 (ac)S(ph)DLEDDETPQLSAHALAALQEFYAEQK ddPTM_KYSE-520_SHP099_60min_R1 1 SDLEDDETPQLSAHALAALQEFYAEQK 27 0 Q8WVE0 Q8WVE0 N6AMT2 Protein-lysine N-methyltransferase N6AMT2 1 S(0.495)DLEDDET(0.495)PQLS(0.01)AHALAALQEFYAEQK 47.806999999999995 0.0079985 35254000.0 18431.0 30240.0 31191.0 42466.0 17527.0 21534.0 18143.0 17606.0 27807.0 21822.0 True False 17408.59568871241 28787.22500883462 33201.62176736452 46501.955872131526 18906.275185011516 21399.598318368287 19977.071498616526 17544.92889527129 22757.949757425857 21628.674057259108 0.8048850171131808 1.3309750256823039 1.5350743036520655 2.150014177892904 0.8741301077892989 0.9894087016945943 0.9236382889552 0.811188371918841 1.052211970885369 1.0 14.400657603349037 (ac)S(ph)DNDDIEVESDADKR ddPTM_KYSE-520_SHP099_60min_R1 2 SDNDDIEVESDADKR 15 1 Q6V3B1;G3V563;G3V2R5;P61244-2;A0A494C130 Q6V3B1 MAX Protein max 1 S(1)DNDDIEVESDADKR;S(1)DNDDIEVESDADKR 93.345 1.9157e-12 3401400000.0 1583640.0 1674700.0 1437480.0 1323400.0 1476200.0 1499830.0 1491940.0 1479330.0 1860760.0 1419270.0 True False 1495792.3322919263 1594244.8982240518 1530142.260849319 1449175.5381052825 1592368.5415709463 1490469.0046363093 1642759.8551312338 1474198.549508217 1522892.88994238 1406696.37197535 1.0633370228939054 1.1333255206916737 1.0877558877191247 1.0301978216310328 1.1319916460258348 1.0595527466551449 1.167814098236702 1.0479863166477619 1.0826024153342069 1.0 20.423879533352324 -8.340513995582537 1.3283575127074678 1.0004087942289164 1.0933368788404665 0.3079413229462298 0.040689875248796414 1.47163688465961 4.1225555453673435 0.037072802519802196 0.01106549576839751 4.565475372552297e-09 8.340513995582537 0.09292808461155011 (ac)S(ph)DNGELEDKPPAPPVR ddPTM_KYSE-520_SHP099_60min_R1 4 SDNGELEDKPPAPPVR 16 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR;S(1)DNGELEDKPPAPPVR 91.936 4.5452e-06 3042940000.0 2785360.0 2599340.0 2244390.0 2034890.0 2405920.0 2497010.0 2368230.0 2327220.0 3028040.0 2430620.0 True False 2630850.5283224955 2474463.8047111137 2389066.9705509692 2228285.333788011 2595252.2161877602 2481425.234371172 2607633.8000974813 2319147.4169972334 2478224.266676585 2409086.597793747 1.0920531170327545 1.0271377570973328 0.9916899511785454 0.9249502844060008 1.077276432721225 1.0300274123162168 1.0824159673153986 0.96266668832956 1.0286987063670332 1.0 21.200054823407864 -8.481890390438139 0.003432846209856527 1.0986487512596582e-08 2.0239466764106493 0.034601109841612576 0.050186482779417146 107952.67940483203 159.06293057198116 47278.670653946545 46496.49289218123 3.2969291133646747e-09 8.481890390438139 2.0239466654241616 (ac)S(ph)DQDHSMDEMTAVVK ddPTM_KYSE-520_SHP099_60min_R1 1 SDQDHSMDEMTAVVK 15 0 H3BUU5;P08047-3;P08047 H3BUU5 SP1 Transcription factor Sp1 1 S(1)DQDHSMDEMTAVVK 121.08 2.7089999999999998e-14 385120000.0 194390.0 181820.0 173800.0 153200.0 201100.0 188350.0 151220.0 193750.0 222760.0 166940.0 True False 183606.79919314233 173085.09428261596 185003.42608983204 167760.0819387403 216925.42589751875 187174.43778511495 166506.79336497793 193077.92647158974 182312.39932262318 165461.0414773547 1.109667856274621 1.046077630946767 1.1181086764472707 1.0138947539605585 1.3110362654595495 1.1312296605526442 1.0063202302988425 1.1669086858613467 1.101844867497554 1.0 17.33613204262466 (ac)S(ph)DQEAKPSTEDLGDKK ddPTM_KYSE-520_SHP099_60min_R1 11 SDQEAKPSTEDLGDKK 16 2 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(0.999)DQEAKPS(0.001)TEDLGDKK;S(1)DQEAKPSTEDLGDKK;S(1)DQEAKPSTEDLGDKK;S(0.999)DQEAKPS(0.001)TEDLGDKK;S(1)DQEAKPSTEDLGDKK;S(0.998)DQEAKPS(0.001)T(0.001)EDLGDKK;S(0.997)DQEAKPS(0.002)T(0.001)EDLGDKK;S(1)DQEAKPSTEDLGDKK;S(1)DQEAKPSTEDLGDKK;S(1)DQEAKPSTEDLGDKK;S(1)DQEAKPSTEDLGDKK 124.5 2.1649999999999998e-23 112897700000.0 54610700.0 48981700.0 46189000.0 45548400.0 48104700.0 44755600.0 46608900.0 47605100.0 56422100.0 44066800.0 True False 51581335.6072685 46628545.60896937 49166416.845012955 49877306.24137413 51890266.21169751 44476263.69915311 51320582.47102844 47439969.01921386 46177268.925394945 43676402.435451575 1.1809886513317909 1.0675912623041859 1.1256974957512802 1.1419737766883784 1.1880618209886913 1.0183133504386868 1.1750185365398178 1.086169335703058 1.0572589854129892 1.0 25.380350692578237 -7.89110659157212 1.624723006571789 1.0011045943831363 1.1250923288245551 0.40107795975530114 0.050116499505467794 0.3552515907542718 2.0481007166355347 0.04545212846281567 0.01338222081906433 1.284971242823838e-08 7.89110659157212 0.12398773444141886 (ac)S(ph)DQEAKPSTEDLGDKKEGEYIK ddPTM_KYSE-520_SHP099_60min_R1 2 SDQEAKPSTEDLGDKKEGEYIK 22 3 B8ZZJ0;B9A032;B8ZZN6;P63165 B8ZZJ0 SUMO1 Small ubiquitin-related modifier 1 1 S(0.984)DQEAKPS(0.008)T(0.008)EDLGDKKEGEYIK;S(0.997)DQEAKPS(0.002)T(0.002)EDLGDKKEGEYIK 63.184 0.0040108 1529280000.0 1033850.0 1573210.0 1507440.0 610850.0 871740.0 652320.0 534620.0 538520.0 1666010.0 712540.0 True False 976500.2795711203 1497630.630163647 1604611.9943892777 668905.0003412508 940340.9784778883 648248.6289141815 588664.6069883908 536651.9998115135 1363504.5806943965 706227.4499477319 1.3826994117028322 2.1206066548029066 2.272089529383254 0.9471523662677748 1.3314987665057245 0.9179034728289852 0.8335340222642974 0.7598855012662439 1.9306876004257691 1.0 19.429773371906208 -5.269281305453326 24.98584621647503 1.0835336006316767 1.944679352007193 0.4934453833179626 0.3812328755689511 453.70495714911516 1445588.7649645724 0.10612796654702625 0.16068875233875674 5.379212420603715e-06 5.269281305453326 0.8611457513755163 (ac)S(ph)DQQLDCALDLMR ddPTM_KYSE-520_SHP099_60min_R1 1 SDQQLDCALDLMR 13 0 A0A6I8PIN8;B1AK87;B1AK85;P47756-2;P47756 A0A6I8PIN8 CAPZB F-actin-capping protein subunit beta 1 S(1)DQQLDCALDLMR 56.358999999999995 6.131100000000001e-05 34906000.0 27192.0 25831.0 22956.0 22229.0 28598.0 31050.0 31029.0 33833.0 51232.0 37532.0 True False 25683.605554091875 24590.039986878535 24435.780490898647 24341.637476607462 30848.499899638213 30856.2054325873 34165.71413385725 33715.641219681565 41929.56025362109 37199.49567945414 0.690428864289075 0.6610315418996391 0.656884725036606 0.6543539645364527 0.8292719924339275 0.8294791332246383 0.9184456270122904 0.9063467287354445 1.1271539973263518 1.0 15.18299544212785 -6.546668863975865 0.7474357649769758 1.0407696285509336 0.6514480290934652 0.8756285223128809 0.054592573859789065 0.21785300230446664 0.25197436485808816 0.04208865789372271 0.03147615466271143 2.8400836784989064e-07 6.546668863975865 -0.38932159945746836 (ac)S(ph)DS(ph)GEQNYGERES(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SDSGEQNYGERESR 14 1 P62995 P62995 TRA2B Transformer-2 protein homolog beta 3 S(0.998)DS(0.995)GEQNY(0.007)GERES(1)R 60.691 0.028592000000000003 0.0 7355.1 5673.3 6124.7 8093.6 6549.6 8181.5 6639.4 4514.6 7947.6 8971.4 True False 6947.097940971655 5400.746152203085 6519.507961866484 8862.813310570427 7065.016257873642 8130.436223726673 7310.575346299655 4498.93990631556 6504.5161826920485 8891.920375643587 0.7812820681571647 0.6073768009660326 0.733194595368226 0.9967265715567034 0.7945433561490123 0.91436223900489 0.8221593353809721 0.5059581863372153 0.7315085952084067 1.0 13.118279314203502 -5.009406412171268 24.873001812892305 0.8101045816447514 0.688318478505163 0.12527656058786818 0.14000760979394897 960.0511699094354 2538649.379865793 0.03928039732290613 0.07521140392754898 9.785738087898748e-06 5.009406412171268 -0.12178610313958838 (ac)S(ph)DSEKLNLDSIIGR ddPTM_KYSE-520_SHP099_60min_R1 1 SDSEKLNLDSIIGR 14 1 P62136-3;P62136;P62136-2;E9PMD7 P62136-3 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase 1 S(0.966)DS(0.034)EKLNLDSIIGR 56.548 0.00084671 150800000.0 267010.0 255510.0 246310.0 207350.0 221050.0 234650.0 194140.0 222160.0 301180.0 215940.0 True False 252198.42302876094 243234.91607167106 262187.5367099341 227056.48165794942 238445.37739754605 233185.46231100208 213765.5658238118 221389.37881253375 246493.30412995027 214026.93959877794 1.1783489662635018 1.1364686918742444 1.2250211921987 1.060878046864554 1.1140904871346744 1.089514538441466 0.9987787809541354 1.0343995911335166 1.151692887783355 1.0 17.70743287470551 -5.570491814204416 1.2697699533942364 1.055343533783518 1.1765050027466855 0.4773822176524468 0.05220458937904297 0.4115125396750831 1.3639677519040088 0.0195657801451584 0.03441359859792948 2.6884885165383123e-06 5.570491814204416 0.12116146896316748 (ac)S(ph)ETAPLAPTIPAPAEKT(ph)PVKK ddPTM_KYSE-520_SHP099_60min_R1 1 SETAPLAPTIPAPAEKTPVKK 21 2 P16402 P16402 HIST1H1D Histone H1.3 2 S(0.76)ET(0.24)APLAPT(0.001)IPAPAEKT(0.999)PVKK 61.911 4.4577e-06 701370000.0 412470.0 360120.0 349120.0 294490.0 295930.0 368920.0 347390.0 304360.0 353380.0 419100.0 True False 389589.4668614403 342819.2946488601 371624.83381175 322478.2410583532 319218.00738862663 366617.43343607435 382507.57139967976 303304.24619815766 289215.0999848653 415387.1000548664 0.9378949582449271 0.8253007727095493 0.8946470262621635 0.7763318625343895 0.7684831987956842 0.8825922456129468 0.920846052631765 0.7301725213857044 0.6962544093128177 1.0 18.66409688807761 -1.1719914046204216 0.9950641556351756 0.821870271319907 74.43252969194671 0.10268028231618487 0.08912561258110592 2573.1655891509927 5.271953625644377 0.028779952838501148 430924.9404738573 0.06729899756961263 1.1719914046204216 73.6106594206268 (ac)S(ph)GDEMIFDPTMSK ddPTM_KYSE-520_SHP099_60min_R1 14 SGDEMIFDPTMSK 13 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(0.999)GDEMIFDPTMSK;S(0.998)GDEMIFDPT(0.002)MSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK 83.86200000000001 2.7529e-30 15484140000.0 9816420.0 11188420.0 8719720.0 6764250.0 7947030.0 9854130.0 8383330.0 9700370.0 11710990.0 10648030.0 True False 9271883.61405187 10650911.509039206 9281807.10324529 7407122.286254077 8572416.048584577 9792626.719466085 9230798.809816297 9666721.68055338 9584569.426033616 10553696.738241976 0.87854368417226 1.009211442512363 0.8794839697839796 0.701850969377764 0.8122666645822685 0.927885930622006 0.8746507540213776 0.9159559839847788 0.9081717680311329 1.0 23.33124509743353 -8.098464824501582 0.8251842536787883 0.9982896191245278 0.8660501044096975 0.22247902228633687 0.07412345914000622 1.3146246379675124 1.9825458203057327 0.08019122692050215 0.028856503084278888 7.971410520790527e-09 8.098464824501582 -0.1322395147148303 (ac)S(ph)GDEMIFDPTMSKK ddPTM_KYSE-520_SHP099_60min_R1 7 SGDEMIFDPTMSKK 14 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(0.995)GDEMIFDPT(0.002)MS(0.002)KK;S(0.999)GDEMIFDPT(0.001)MSKK;S(1)GDEMIFDPTMSKK;S(0.999)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK 113.47 6.388200000000001e-11 13349010000.0 7472180.0 8859970.0 8044710.0 5599350.0 6153310.0 6136960.0 4725970.0 5518060.0 9681360.0 5905920.0 True False 7057683.279978469 8434323.742113901 8563284.878591098 6131510.540494037 6637540.4894553 6098656.956250272 5203717.168622437 5498919.137784889 7923469.0712249605 5853598.14353623 1.2056999997124567 1.4408785050315436 1.4629095931443483 1.0474771909760647 1.1339248658168875 1.041864645762307 0.8889775213504507 0.9394083780515423 1.3536065983576893 1.0 22.480892275742608 -5.270619693551156 24.504959735322046 1.050831357123705 1.3769342806394513 0.5301303514837802 0.13441220674412188 366.28277643424457 977716.1669814858 0.038255135419004396 0.05767707172209728 5.362660536875622e-06 5.270619693551156 0.32610292351574643 (ac)S(ph)GEDEQQEQTIAEDLVVTK ddPTM_KYSE-520_SHP099_60min_R1 8 SGEDEQQEQTIAEDLVVTK 19 0 Q9UQ80;F8VR77 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 S(0.999)GEDEQQEQT(0.001)IAEDLVVTK;S(0.969)GEDEQQEQT(0.031)IAEDLVVTK;S(0.676)GEDEQQEQT(0.324)IAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK;S(0.992)GEDEQQEQT(0.008)IAEDLVVTK;S(0.997)GEDEQQEQT(0.003)IAEDLVVTK;S(1)GEDEQQEQTIAEDLVVTK 102.9 3.9927999999999996e-53 2557580000.0 971091.0 1327213.0 1209906.0 581795.0 887961.0 1156671.0 899409.0 1100972.0 1556019.0 1326691.0 True False 917222.6464080849 1263451.6952926738 1287898.476678046 637088.6218769556 957838.4788930222 1149451.7872436766 990330.0391059477 1097152.9851007953 1273485.1736469239 1314937.5498899794 0.6975408425174479 0.9608453993867515 0.9794369905900125 0.4845010486849818 0.7284288740352455 0.8741493368562264 0.7531384583159926 0.8343764958211086 0.968475783320262 1.0 20.32656285279349 -7.732670161657766 2.858831047185702 0.9996593480414251 0.7868898676291181 0.2619256008077422 0.1338117476468441 0.3884078497595514 5.9444649359959065 0.127940533221425 0.03699325375627898 1.850673636554997e-08 7.732670161657766 -0.21276948041230703 (ac)S(ph)GGKYVDSEGHLYTVPIR ddPTM_KYSE-520_SHP099_60min_R1 4 SGGKYVDSEGHLYTVPIR 18 1 Q03135 Q03135 CAV1 Caveolin-1 1 S(0.85)GGKY(0.12)VDS(0.03)EGHLYTVPIR;S(0.653)GGKY(0.302)VDS(0.045)EGHLYTVPIR;S(0.94)GGKY(0.051)VDS(0.01)EGHLYTVPIR;S(0.844)GGKY(0.15)VDS(0.005)EGHLYTVPIR 62.475 1.8658000000000002e-06 1946420000.0 870250.0 1370530.0 1280250.0 1226540.0 989700.0 929730.0 763150.0 789600.0 1604900.0 750560.0 True False 821975.497699635 1304687.6815925287 1362776.963472427 1343109.9928273032 1067583.759377298 923927.2102041678 840296.649626258 786861.0618940255 1313490.6162366604 743910.6223268446 1.1049385141572716 1.7538231642823634 1.8319095366723737 1.805472260399038 1.4350968077832398 1.241986849595261 1.1295666769724726 1.05773602134197 1.7656564872380127 1.0 19.50476977255561 -6.026946157557165 3.799569129202214 1.2394231346467137 1.647996185205964 0.30328860628594634 0.273264170327438 0.27715214592130943 8.643336555400346 0.09144693865968144 0.096880304864947 9.398398216816214e-07 6.026946157557165 0.4085730505592502 (ac)S(ph)KS(ph)ESPKEPEQLRK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.882)KS(0.882)ES(0.236)PKEPEQLRK 59.306000000000004 0.005604100000000001 966020000.0 550600.0 547920.0 478700.0 453720.0 508770.0 514820.0 426650.0 426070.0 684470.0 501140.0 True False 520057.12040611246 521597.1007553132 509557.76794708055 496841.41238410835 548807.3044946832 511606.81741721695 469779.94570273644 424592.06261548575 560187.5020845573 496700.2894810208 1.047023992978736 1.0501244146652418 1.025885788147001 1.0002841208392188 1.1049063512085056 1.03001111183521 0.9458016346106578 0.8548254784774182 1.1278179496731748 1.0 18.922016062026763 -6.652774837176644 5.996308653092606 0.9704130314360601 1.044529176389232 0.15715404822456447 0.0675670914592167 0.33410214827911305 16.44781504561552 0.025448136278259294 0.019528621123871548 2.2244628791117474e-07 6.652774837176644 0.07411614495317187 (ac)S(ph)KSES(ph)PKEPEQLR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSESPKEPEQLR 13 2 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.835)KS(0.33)ES(0.835)PKEPEQLR 66.19 0.004443600000000001 0.0 640410.0 610030.0 498240.0 546670.0 598190.0 543650.0 581990.0 576590.0 663340.0 536830.0 True False 604885.1806743148 580723.2431263016 530357.3476121863 598625.3524376716 645264.1497644803 540256.8786932722 640823.2288750384 574589.9438671175 542894.1774406037 532074.1038474201 1.1368438649812103 1.0914330145502296 0.9967734640291269 1.1250789093267657 1.2127336119134247 1.0153790135371796 1.2043871788558305 1.0799058621952582 1.0203356515848898 1.0 19.02126766341144 -7.723767386580727 3.6232411022222335 1.0049714791444893 1.1091778533098133 0.2724134266208059 0.06544140894434676 0.3082118804829109 7.900348496317437 0.05648736777601011 0.016937347918295733 1.8890028511428284e-08 7.723767386580727 0.10420637416532408 (ac)S(ph)KSES(ph)PKEPEQLRK ddPTM_KYSE-520_SHP099_60min_R1 2 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.854)KS(0.259)ES(0.887)PKEPEQLRK;S(0.602)KS(0.476)ES(0.922)PKEPEQLRK 48.70399999999999 0.001004 6250100000.0 6242800.0 6314000.0 5571700.0 4818900.0 5368700.0 5452100.0 4920100.0 5063200.0 7130800.0 5468800.0 True False 5896499.43928673 6010665.9624927845 5930860.697035201 5276886.807144888 5791186.146275541 5418071.421546192 5417471.723548649 5045636.940959766 5836026.472839664 5420350.686662016 1.087844639609091 1.1089072109823763 1.0941839448929769 0.9735323620535931 1.0684153998607595 0.9995794985882679 0.9994688603598192 0.930869095495183 1.076687987587318 1.0 22.369954763623127 -5.245483777351474 22.771305705411134 1.0059996907138566 1.098171513801359 0.5161790852180628 0.03993614648398854 196.3064684649099 280159.58346972225 0.010564444917267334 0.01819236743947617 5.682196164553263e-06 5.245483777351474 0.09217182308750238 (ac)S(ph)KSESPKEPEQLR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSESPKEPEQLR 13 2 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.982)KS(0.018)ESPKEPEQLR;S(0.989)KS(0.01)ESPKEPEQLR 132.25 3.5977e-06 1256190000.0 1330980.0 1187040.0 1085970.0 1054240.0 1139960.0 1088810.0 1065710.0 1075340.0 1418480.0 998570.0 True False 1257147.8861571483 1130012.8166166337 1155973.3638134338 1154434.652631185 1229668.3665148474 1082014.3329164376 1173442.3671273005 1071609.8965262421 1160919.7889708872 989723.4466757048 1.270201176277749 1.1417460305827194 1.1679761328239027 1.166421444807349 1.242436329709145 1.0932491662703563 1.1856265212960984 1.0827366979387814 1.172973917987089 1.0 19.916665931096666 -13.999999999007114 0.11963844657233036 0.4448951029788833 1.2493916969084637 0.5597442058722601 0.049493792131976626 112.8626142462128 0.8748422019201239 15.07519287311537 0.4578902365930708 1.000000002286204e-14 13.999999999007114 0.8044965939295805 (ac)S(ph)LLNKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SLLNKPK 7 1 P62316;K7ERG4 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 1 S(1)LLNKPK;S(1)LLNKPK 50.038999999999994 0.027264 2222400000.0 3654700.0 3318660.0 3127760.0 2816510.0 2696500.0 2865550.0 2563760.0 3382800.0 4101300.0 3063350.0 True False 3451966.5055361697 3159226.5921897823 3329380.414192939 3084190.26358539 2908699.20901372 2847665.0395282013 2822929.8806863897 3371065.856351459 3356607.3053594693 3036211.1022502338 1.1369323111221767 1.0405161188720962 1.096557618054103 1.0158023140418653 0.9580029553472055 0.9379008717205813 0.9297541526655461 1.1102870461981558 1.1055250087425672 1.0 21.533840671533966 -5.317739024655292 5.221617920178815 1.003842446351913 1.0863366051010865 0.2722284433023009 0.062014719943660056 0.3174791801098293 18.81389157907292 0.019620423284064117 0.029932418284311584 4.811283802731898e-06 5.317739024655292 0.08249415874917343 (ac)S(ph)LPLNPKPFLNGLTGK ddPTM_KYSE-520_SHP099_60min_R1 2 SLPLNPKPFLNGLTGK 16 1 P62306;A0A0B4J254;F8W0W6 P62306 SNRPF Small nuclear ribonucleoprotein F 1 S(1)LPLNPKPFLNGLTGK;S(1)LPLNPKPFLNGLTGK 86.772 1.4173e-05 233940000.0 496640.0 495480.0 408340.0 338790.0 403750.0 540620.0 381330.0 508490.0 522410.0 428550.0 True False 469090.3891727046 471676.39706935716 434662.24976710096 370988.4997390727 435522.8279767444 537245.7900471931 419878.5578221598 506726.1668724577 427553.5128844122 424753.38040685473 1.1043829450477385 1.1104712024129313 1.0233285238383623 0.8734209469591914 1.0253545894315756 1.2648417053975798 0.9885231694212168 1.1929891326281723 1.006592372437096 1.0 18.696265903604516 -6.0600413456460265 24.99986845478914 1.1016970863501598 1.0229600472050524 0.08203201546389105 0.10188027921534117 553.7632403141937 230573.26325804653 0.0336032760611841 0.03360337509452695 8.708806765420006e-07 6.0600413456460265 -0.07873703914510743 (ac)S(ph)LPLNPKPFLNGLTGKPVMVK ddPTM_KYSE-520_SHP099_60min_R1 5 SLPLNPKPFLNGLTGKPVMVK 21 2 P62306;A0A0B4J254;F8W0W6 P62306 SNRPF Small nuclear ribonucleoprotein F 1 S(1)LPLNPKPFLNGLTGKPVMVK;S(1)LPLNPKPFLNGLTGKPVMVK;S(1)LPLNPKPFLNGLTGKPVMVK;S(0.998)LPLNPKPFLNGLT(0.002)GKPVMVK;S(1)LPLNPKPFLNGLTGKPVMVK 118.37 2.6561e-09 2986707000.0 3299972.0 3838170.0 4277099.0 2481545.0 3393844.0 3485604.0 2196456.0 2588559.0 3741774.0 2035009.0 True False 3116915.974828908 3653778.551989379 4552807.645140367 2717390.290696289 3660920.214469116 3463849.0525168465 2418495.2078247955 2579579.8930032104 3062362.1640465483 2016980.4034730461 1.545337758097143 1.8115091974606812 2.257239404657016 1.3472566644758692 1.8150499668540974 1.7173439298430624 1.1990672808027185 1.2789315595537876 1.518290489473004 1.0 20.94376563644332 -6.969106999543836 0.5402295125373968 1.087334360303386 1.8438851933200542 0.4633680883568606 0.2546166715289368 0.7845212300435835 0.48614628671674814 0.24931705918460118 0.18124867843969977 1.0737248401975434e-07 6.969106999543836 0.7565508330166681 (ac)S(ph)QGDSNPAAIPHAAEDIQGDDR ddPTM_KYSE-520_SHP099_60min_R1 1 SQGDSNPAAIPHAAEDIQGDDR 22 0 P68402-3;P68402-2;P68402-4;P68402 P68402-3 PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta 1 S(0.5)QGDS(0.5)NPAAIPHAAEDIQGDDR 48.405 1.5782e-06 404590000.0 14816.0 18206.0 13499.0 5505.1 10561.0 13514.0 10817.0 6996.0 19854.0 13032.0 True False 13994.126945036232 17331.35643223687 14369.167139163668 6028.303048831334 11392.090616129768 13429.65411323623 11910.487923746625 6971.732508878677 16249.01407861089 12916.546618742579 1.0834263490157678 1.3417949041493933 1.1124619887418872 0.46671167044633693 0.8819765028834606 1.0397248203903904 0.9221108609993238 0.5397520494187148 1.257999878623341 1.0 13.656932780697781 -5.015760911409984 24.798981346558243 0.857214035533059 1.2162401537810605 0.2858131912102707 0.2249066028036862 693.3351725354257 1090931.4180584743 0.058689677795307635 0.1057992294835861 9.643597786180805e-06 5.015760911409984 0.35902611824800157 (ac)S(ph)QKQEEENPAEETGEEKQDTQEK ddPTM_KYSE-520_SHP099_60min_R1 1 SQKQEEENPAEETGEEKQDTQEK 23 2 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-8 A6NMQ3 ENSA Alpha-endosulfine 1 S(0.998)QKQEEENPAEET(0.002)GEEKQDTQEK 54.658 0.015194999999999998 575030000.0 1737900.0 1588500.0 1428800.0 1236800.0 1414200.0 1299300.0 1221100.0 1271500.0 1730800.0 1220700.0 True False 1641495.2225822397 1512186.0756128877 1520902.7341608303 1354345.100142522 1525489.4943026905 1291190.586749135 1344540.7047875565 1267089.4632703299 1416530.349917384 1209885.5476902283 1.3567359538395924 1.2498587808572275 1.2570633123640162 1.1193993537058764 1.260854381817335 1.0672006035728956 1.111295781121112 1.0472804354835947 1.1707969837491305 1.0 20.206439147741854 -1.000000000000021 0.20086144939435463 1.0155107608692793 2.610110862429157 0.717546818456237 0.05755114777378041 26.92781856563919 0.32591189184523195 0.10004621704864669 13.53761226950706 0.09999999999999515 1.000000000000021 1.5946001015598779 (ac)S(ph)SPPEGKLETK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPPEGKLETK 11 1 P51397;B4DQ75 P51397 DAP Death-associated protein 1 1 S(0.5)S(0.5)PPEGKLETK 66.435 0.034693 646000000.0 1472500.0 2220600.0 2195800.0 808990.0 1160200.0 1425000.0 795840.0 886220.0 2953300.0 1313100.0 True False 1390817.489644023 2113919.0428114464 2337344.7814042214 885876.1663682866 1251501.139364999 1416106.0464230874 876291.2738499129 883145.9096653024 2417055.166634507 1301466.9555763402 1.0686537093276522 1.6242587134110684 1.7959309465288378 0.6806751124741283 0.9616080792545252 1.088084519054101 0.6733104287398961 0.6785772822593187 1.8571775151710563 1.0 20.31170725130719 -5.26144143930104 24.99999999022685 0.9674949646400824 1.5090788787971692 0.2824264260120982 0.3672841847789458 0.2287357302018438 2733110.847818803 0.10066939511235473 0.1608530171803535 5.477199510845656e-06 5.26144143930104 0.5415839141570867 (ac)S(ph)SSPVNVKK ddPTM_KYSE-520_SHP099_60min_R1 4 SSSPVNVKK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.333)S(0.333)S(0.333)PVNVKK;S(0.333)S(0.333)S(0.333)PVNVKK;S(0.333)S(0.333)S(0.333)PVNVKK;S(0.333)S(0.333)S(0.333)PVNVKK 41.983999999999995 0.02052 121279000000.0 91980000.0 99490500.0 78068300.0 52314700.0 58555800.0 77886800.0 63867700.0 75432700.0 98850900.0 72485200.0 True False 86877686.0424159 94710827.0417149 83100707.5316965 57286673.35901196 63163808.323072754 77400679.59055847 70324070.40468456 75171041.56982453 80902068.38840327 71843037.52063231 1.2092707803100036 1.3183020973259278 1.156698135262323 0.7973865712813164 0.879191783962823 1.0773581165513788 0.9788571423429651 1.0463232647733813 1.1260947640913614 1.0 26.098345012666314 -5.021127431009473 10.704496526860881 0.9865456571023548 1.257368919668804 0.6053411708012597 0.09212345206305751 0.3912017692270381 197.57535523400028 0.026496811451982537 0.04791871984466795 9.525166348772989e-06 5.021127431009473 0.2708232625664493 (ac)S(ph)TVHEILCK ddPTM_KYSE-520_SHP099_60min_R1 4 STVHEILCK 9 0 P07355;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YNP5;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 S(0.5)T(0.5)VHEILCK;S(0.5)T(0.5)VHEILCK;S(0.5)T(0.5)VHEILCK;S(0.5)T(0.5)VHEILCK 64.836 0.00049273 1898780000.0 3435150.0 3593800.0 3181000.0 2914100.0 2846950.0 3205510.0 2921750.0 3596150.0 4098420.0 4276650.0 True False 3244595.381698251 3421148.4535962273 3386052.349779955 3191055.187843891 3070988.76807032 3185503.223066442 3217109.0035320953 3583675.7949977214 3354250.240760577 4238762.208183353 0.765458221608713 0.8071102566195761 0.7988304565051665 0.75282712997753 0.7245013089296376 0.7515173219475513 0.7589736922069245 0.8454533703445497 0.7913277688200726 1.0 22.015211603729163 -8.668160953207598 0.7864656151744036 1.0027802583259435 0.7675112207150495 0.8343051031865386 0.030282295546299152 1.0175797353319604 0.8734954487047913 0.03939208089015087 0.011353016912236615 2.147034617478435e-09 8.668160953207598 -0.23526903761089402 (ac)S(ph)YAEKPDEITKDEWMEK ddPTM_KYSE-520_SHP099_60min_R1 6 SYAEKPDEITKDEWMEK 17 2 Q9NWU2 Q9NWU2 GID8 Glucose-induced degradation protein 8 homolog 1 S(0.897)Y(0.103)AEKPDEITKDEWMEK;S(0.9)Y(0.1)AEKPDEITKDEWMEK;S(0.541)Y(0.459)AEKPDEITKDEWMEK;S(0.547)Y(0.453)AEKPDEITKDEWMEK;S(0.905)Y(0.095)AEKPDEITKDEWMEK;S(0.543)Y(0.457)AEKPDEITKDEWMEK 102.78 4.1223e-08 3609500000.0 2894770.0 2837380.0 2508290.0 2642380.0 2779780.0 2825030.0 2410390.0 2680950.0 3246090.0 2801630.0 True False 2734191.337519069 2701068.0058057886 2669978.386805898 2893511.000739488 2998532.871215342 2807397.9398783324 2654055.7443394293 2671650.4101884332 2656681.8832697743 2776809.7378351553 0.9846520272039553 0.9727234707522971 0.9615273061118892 1.0420271008539874 1.0798481546499636 1.011015591607304 0.9557931565050521 0.9621294443714008 0.9567388961049111 1.0 21.404996898916917 -9.34633400628018 8.916158219354037 0.9999999999855321 0.9930715219597396 0.002991102377454813 0.039237659655927806 0.0 0.0 0.043167175108076786 0.01046957779589024 4.504701246758293e-10 9.34633400628018 -0.0069284780257925505 (ac)S(ph)YGRPPPDVEGMTSLK ddPTM_KYSE-520_SHP099_60min_R1 3 SYGRPPPDVEGMTSLK 16 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(0.545)Y(0.455)GRPPPDVEGMTSLK;S(0.908)Y(0.092)GRPPPDVEGMTSLK;S(0.553)Y(0.447)GRPPPDVEGMTSLK 78.763 2.8134000000000002e-05 1276590000.0 1396500.0 1418120.0 1259060.0 1031540.0 1061080.0 1339710.0 1114110.0 1204460.0 1462180.0 1211350.0 True False 1319033.361146267 1349991.386558485 1340221.0221672263 1129577.2514561897 1144580.9592806532 1331348.3729498077 1226735.1114657812 1200282.009383078 1196684.9705582403 1200618.381416038 1.0986283248392112 1.124413391844187 1.1162756150597475 0.9408295499556981 0.9533262000625937 1.108885548944856 1.0217527321370348 0.9997198343468945 0.9967238458791889 1.0 20.19534623017004 -5.237589597133279 24.421040607072634 1.0061415618666874 1.114236571726663 0.5799800534412467 0.042865082008496744 460.73166611672497 471765.9279495125 0.012470914190260099 0.02158492252479835 5.7864259915925336e-06 5.237589597133279 0.10809500985997555 (ac)SAEVPEAASAEEQKEMEDKVT(ph)SPEKAEEAK ddPTM_KYSE-520_SHP099_60min_R1 2 SAEVPEAASAEEQKEMEDKVTSPEKAEEAK 30 3 P56211 P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 SAEVPEAAS(0.006)AEEQKEMEDKVT(0.497)S(0.497)PEKAEEAK;SAEVPEAAS(0.001)AEEQKEMEDKVT(0.555)S(0.445)PEKAEEAK 107.63 7.1167e-07 5184400000.0 2191200.0 2370700.0 1881740.0 1541610.0 1706490.0 2191900.0 1703870.0 1754230.0 2628800.0 2338800.0 True False 2069649.7679510918 2256808.0135067548 2003039.971290455 1688124.1508980521 1840781.0544000834 2178219.5390559793 1876113.8077687114 1748144.98557036 2151476.1866552015 2318080.0515588685 0.8928292905843732 0.9735677644044651 0.8640943913664437 0.7282423873855512 0.7940972759599869 0.9396653655645605 0.8093395249689749 0.7541348644947627 0.9281285110099503 1.0 21.144498957926036 -4.934260008504755 6.923914084043466 0.8366683740733721 0.9312695611600538 0.1170045045815763 0.08370530796265452 0.36100273022047064 30.67183301772374 0.02142381103659598 0.045088718446328155 1.1634292853989049e-05 4.934260008504755 0.09460118708668164 (ac)SAEVPEAASAEEQKEMEDKVTS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 1 SAEVPEAASAEEQKEMEDKVTSPEK 25 2 P56211 P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 SAEVPEAASAEEQKEMEDKVT(0.249)S(0.751)PEK 70.70100000000001 0.00088848 306210000.0 278730.0 322890.0 210540.0 203280.0 239760.0 296640.0 225260.0 285610.0 312630.0 288550.0 True False 263268.2912655205 307377.8797322293 224111.74527591062 222599.67008163955 258627.74795220827 294788.5597269793 248031.47912574303 284619.2855718754 255864.27276096103 285993.67148850305 0.9205388703019042 1.0747716134151797 0.7836248407507853 0.7783377475560261 0.9043128353370053 1.030752037947909 0.8672621244897508 0.9951943484991314 0.894650120855023 1.0 18.12562369761821 -6.020223089257769 24.058709670981653 0.9533942972613946 0.8883041460727028 0.11878156495195336 0.08923718109195597 1197.8244223325348 1425009.2272106926 0.030836771990322753 0.031253778956034116 9.545021494954802e-07 6.020223089257769 -0.06509015118869177 (ac)SAEVPEAASAEEQKEMEDKVTS(ph)PEKAEEAK ddPTM_KYSE-520_SHP099_60min_R1 2 SAEVPEAASAEEQKEMEDKVTSPEKAEEAK 30 3 P56211 P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 S(0.001)AEVPEAAS(0.001)AEEQKEMEDKVT(0.207)S(0.79)PEKAEEAK;SAEVPEAASAEEQKEMEDKVT(0.138)S(0.862)PEKAEEAK 148.95 7.964e-16 5355630000.0 1468340.0 1619480.0 1308110.0 1035140.0 1150490.0 1434820.0 1074420.0 1387270.0 1890960.0 1464630.0 True False 1386888.2531367787 1541677.749910962 1392432.863650002 1133519.394373812 1241027.0176073427 1425864.7561605445 1183032.8589287084 1382457.8841612518 1547609.3312224257 1451654.5176648991 0.9553845190160658 1.0620142266293997 0.9592040300951498 0.7808465310307906 0.854905215053257 0.9822342291567835 0.8149548288057616 0.9523325745474512 1.0661003099496962 1.0 20.469266713458424 -9.42044430593417 7.045800490026323 1.0000117620726736 0.9320712077734629 0.040721785370073205 0.0903301058635135 0.0 0.0 0.09263030248843034 0.02246614831133605 3.79800641606444e-10 9.42044430593417 -0.06794055429921075 (ac)SCINLPTVLPGS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 3 SCINLPTVLPGSPSK 15 0 K7ERV3;P04183;K7ENW5;K7ES52;K7ERJ1 K7ERV3 TK1 Thymidine kinase;Thymidine kinase, cytosolic 1 SCINLPTVLPGS(0.825)PS(0.175)K;SCINLPTVLPGS(0.713)PS(0.287)K;SCINLPTVLPGS(0.8)PS(0.199)K 74.789 8.0908e-08 1090430000.0 895530.0 1813870.0 1234320.0 713870.0 1026190.0 1651530.0 1059850.0 1334950.0 1685740.0 1736850.0 True False 845853.1657052034 1726728.9625256227 1313886.242181829 781715.9901671589 1106945.3147775976 1641222.1886660513 1166989.981139211 1330319.3700296732 1379652.1100472214 1721462.860248852 0.49135719697311864 1.0030590856174553 0.7632382158926714 0.4540998288247446 0.6430259637536294 0.9533880901902226 0.6779059880330573 0.77278424109444 0.8014416935186048 1.0 20.715203625101132 -6.229380541914293 24.837661201730175 0.8167032039131104 0.6824854361248306 0.2009908033543769 0.16530047442312903 1333.2519255685904 1032940.4057193287 0.05592837599300949 0.05592415224295598 5.896841547031737e-07 6.229380541914293 -0.13421776778827976 (ac)SCINLPTVLPGSPS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 SCINLPTVLPGSPSK 15 0 K7ERV3;P04183;K7ENW5;K7ES52;K7ERJ1 K7ERV3 TK1 Thymidine kinase;Thymidine kinase, cytosolic 1 SCINLPTVLPGS(0.06)PS(0.94)K 72.089 0.0019617999999999997 94517000.0 278370.0 368090.0 302920.0 191040.0 322910.0 396210.0 249350.0 321010.0 406260.0 418700.0 True False 262928.2611831626 350406.4038856461 322446.7078891369 209196.38416172937 348321.1798934258 393737.1064233634 274556.7314214866 319896.4912342974 332493.42498118593 414990.6437436711 0.633576359243334 0.844371816975428 0.7769975365717011 0.5040990376904606 0.8393470675656357 0.9487855024186148 0.661597401196045 0.7708522976529781 0.8012070392279939 1.0 18.66271928468729 (ac)SDEFSLADALPEHS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 7 SDEFSLADALPEHSPAK 17 0 Q8NDC0 Q8NDC0 MAPK1IP1L MAPK-interacting and spindle-stabilizing protein-like 1 SDEFSLADALPEHS(1)PAK;SDEFSLADALPEHS(1)PAK;S(0.001)DEFS(0.004)LADALPEHS(0.995)PAK;S(0.002)DEFS(0.01)LADALPEHS(0.989)PAK;SDEFSLADALPEHS(1)PAK;SDEFSLADALPEHS(1)PAK;SDEFSLADALPEHS(1)PAK 98.572 4.1654e-18 34405500000.0 20773641.0 25728835.0 18473680.0 15069934.0 16866552.0 21166596.0 16093293.0 18604631.0 25280745.0 20948109.0 True False 19621285.722503357 24492783.14683133 19664522.97173307 16502175.996419134 18193853.684846614 21034487.423013877 17720160.111843966 18540095.87741454 20690398.98371977 20762525.051642206 0.9450336928528554 1.179663026819278 0.947116158695626 0.794805831919461 0.876283286334076 1.0130987137014995 0.8534684518269803 0.892959590960162 0.996526141799081 1.0 24.307478573126854 -4.97903734619369 23.499392884477846 0.909967618103979 1.0626089588990986 0.3079473978327758 0.08463931041652686 122.73110967004554 137579.36038236794 0.0213575023443517 0.044449139966909905 1.049452179452291e-05 4.97903734619369 0.1526413407951196 (ac)SDKPDMAEIEKFDK ddPTM_KYSE-520_SHP099_60min_R1 8 SDKPDMAEIEKFDK 14 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 ;;;;;;; 111.83 1.2767e-10 11650710000.0 13094300.0 13159940.0 9677000.0 7484620.0 12283170.0 12611980.0 8195560.0 9896690.0 11648360.0 10130660.0 False True 12367933.07616009 12527716.728927355 10300794.903747434 8195956.03446694 13249785.597322855 12533263.954643559 9024047.185757674 9862360.692294808 9533311.455259794 10040910.233934218 1.2317541724814425 1.2476674362239328 1.02588258073804 0.8162562799105525 1.3195801265650136 1.248219898658808 0.8987280012981336 0.9822177932598197 0.9494469359003983 1.0 23.25938672338659 -6.771330306153492 24.99962731564642 0.9561163143239916 1.1398849100515767 0.3161108230153965 0.1370258827353777 295.39728898557394 746618.2694933276 0.061801369804102765 0.04222577684431203 1.6930496481552517e-07 6.771330306153492 0.18376859572758508 (ac)SDLEDDET(ph)PQLSAHALAALQEFYAEQK ddPTM_KYSE-520_SHP099_60min_R1 1 SDLEDDETPQLSAHALAALQEFYAEQK 27 0 Q8WVE0 Q8WVE0 N6AMT2 Protein-lysine N-methyltransferase N6AMT2 1 S(0.135)DLEDDET(0.727)PQLS(0.135)AHALAALQEFY(0.003)AEQK 47.745 0.00023254 17881000.0 11518.0 18771.0 16899.0 23116.0 13118.0 14983.0 11922.0 13674.0 16973.0 11517.0 True False 10879.073579436244 17869.21298415459 17988.336579356 25312.93768992119 14150.311968789914 14889.485539338337 13127.19210750737 13626.568085535588 13891.131054511068 11414.968340090412 0.9530533292175628 1.565419408251557 1.5758551441776074 2.2175214977180304 1.239627789338033 1.3043825524285602 1.1499981179451433 1.193745587333592 1.2169224338296363 1.0 13.478639237740369 -5.964495619822951 24.999974620886967 1.193493490735024 1.59587337384859 0.30397194953604956 0.29209058777999347 227.7463161231526 160363.8607028118 0.09271656884849855 0.10513034924182238 1.0851864944759808e-06 5.964495619822951 0.4023798831135659 (ac)SDS(ph)EKLNLDSIIGR ddPTM_KYSE-520_SHP099_60min_R1 1 SDSEKLNLDSIIGR 14 1 P62136-3;P62136;P62136-2;E9PMD7 P62136-3 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase 1 S(0.278)DS(0.72)EKLNLDS(0.003)IIGR 43.761 8.314e-06 238350000.0 293370.0 286340.0 261470.0 239440.0 234990.0 243300.0 253060.0 271690.0 318810.0 242240.0 True False 277096.1812814039 272583.79659489734 278324.7745667916 262196.305609739 253482.376089796 241781.4744524475 278641.77442759724 270747.5708029226 260922.1405460831 240093.94205986793 1.1541156719910466 1.1353214256731559 1.1592328077040392 1.09205714796569 1.0557633146220309 1.0070286337843493 1.1605531236523965 1.1276734784729017 1.086750204138935 1.0 17.873239477045356 -7.188277263837678 0.013199684235200584 4.2564877479072463e-07 2.1743212102098473 0.3695264441729078 0.04555101217605005 807.372898243757 9.765006276741266 797.3198055377316 809.0178245414835 6.482204621900077e-08 7.188277263837678 2.1743207845610724 (ac)SDSGEQNYGERES(ph)R ddPTM_KYSE-520_SHP099_60min_R1 11 SDSGEQNYGERESR 14 1 P62995 P62995 TRA2B Transformer-2 protein homolog beta 1 SDSGEQNY(0.005)GERES(0.995)R;SDSGEQNYGERES(1)R;SDSGEQNYGERES(1)R;SDSGEQNYGERES(1)R;SDSGEQNYGERES(1)R;SDSGEQNYGERES(1)R;SDSGEQNYGERES(1)R;SDSGEQNYGERES(1)R;SDSGEQNYGERES(1)R;SDSGEQNYGERES(1)R;SDSGEQNYGERES(1)R 92.939 7.1551e-11 8137530000.0 66258.0 84354.4 81290.3 60681.799999999996 84399.79999999999 85714.6 48205.6 58337.9 98852.03 84090.4 True False 62582.53665795161 80301.88800546415 86530.40280707875 66448.98002735157 91041.5840908276 85179.62338718348 53078.692489318666 58135.5394410682 80902.99320888818 83345.42447734113 0.7508814917004321 0.96348286074535 1.0382141953167867 0.7972720811496599 1.0923405173319238 1.0220071938123132 0.636851906654444 0.6975252667514259 0.9706950767391319 1.0 16.346815379420526 -6.736409856157276 24.99985372646344 0.8010616362696391 0.9492683887953869 0.13126708925145159 0.14225713239730092 371.4425447429851 371001.96171841567 0.05404157923538156 0.04184324311882649 1.8348059670206396e-07 6.736409856157276 0.14820675252574778 (ac)SET(ph)APLAPTIPAPAEKT(ph)PVKK ddPTM_KYSE-520_SHP099_60min_R1 1 SETAPLAPTIPAPAEKTPVKK 21 2 P16402 P16402 HIST1H1D Histone H1.3 2 S(0.462)ET(0.538)APLAPT(0.196)IPAPAEKT(0.804)PVKK 51.119 5.8375e-05 527870000.0 629170.0 453930.0 389560.0 379290.0 405610.0 408720.0 446000.0 456810.0 498040.0 520160.0 True False 594268.6858806994 432122.52143717924 414671.6609180386 415337.6075623029 437529.1993947919 406169.0268730139 491086.03254053753 455225.4327302558 407608.4905667056 515551.78707835585 1.1526847559746307 0.8381748104996934 0.8043259112105743 0.8056176275055333 0.848661978022189 0.7878336125547801 0.9525445257857289 0.8829868194425804 0.7906256961626155 1.0 18.97575782774998 -4.260019064632399 24.840530535559246 0.8504463521712379 1.1526848630845647 0.632240889705822 0.06755632112475106 69.09211669188079 1208249.5498887666 0.016219707201445964 0.09900164049589459 5.4951675067569786e-05 4.260019064632399 0.3022385109133269 (ac)SETAPAAPAAPAPAEKT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 10 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 S(0.001)ET(0.001)APAAPAAPAPAEKT(0.998)PVK;SETAPAAPAAPAPAEKT(0.999)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;S(0.05)ET(0.05)APAAPAAPAPAEKT(0.901)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;S(0.002)ET(0.002)APAAPAAPAPAEKT(0.996)PVK;SETAPAAPAAPAPAEKT(1)PVK;S(0.019)ET(0.019)APAAPAAPAPAEKT(0.962)PVK 148.06 1.4693999999999998e-35 38884300000.0 18752840.0 26972900.0 18181870.0 12179280.0 13171120.0 24181000.0 18748300.0 22542500.0 22349890.0 26782900.0 True False 17712582.582340255 25677081.396851663 19353902.432220574 13336795.109365929 14207612.210578462 24030077.4095135 20643561.12977523 22464305.328959025 18291713.370877657 26545624.34278089 0.6672505552560948 0.9672811257059234 0.7290807020511418 0.5024103007391831 0.535214844718551 0.9052368518146571 0.7776634244200501 0.8462526644270929 0.6890669865089124 1.0 24.661970737699598 -6.283372711074994 24.893393497408567 0.8299109869418476 0.6890269022097146 0.2507925103515818 0.1397948532577237 1420.7335390540948 1612466.534550387 0.05303544365985975 0.046810976272858754 5.207476142197858e-07 6.283372711074994 -0.14088408473213299 (ac)SETAPAAPAAPAPAEKT(ph)PVKK ddPTM_KYSE-520_SHP099_60min_R1 9 SETAPAAPAAPAPAEKTPVKK 21 2 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SET(0.001)APAAPAAPAPAEKT(0.999)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK 90.46799999999999 3.5816999999999997e-09 119833000000.0 66708100.0 80435600.0 57147270.0 42931690.0 43873020.0 70177600.0 57985700.0 68812300.0 71178000.0 81493900.0 True False 63007668.71369959 76571353.03970301 60831074.463064946 47011904.90971671 47325577.07066324 69739595.56734098 63847460.44189654 68573606.1922116 58253869.45136322 80771927.44729488 0.7800689014733889 0.9479946246134486 0.7531214914087362 0.5820327234408615 0.58591615387096 0.8634137846078678 0.790465975738392 0.8489782076446931 0.7212143041822905 1.0 26.267350630830492 -10.439258616180455 8.694434311164295 1.0000031386355293 0.7644571018313787 0.2974442855016953 0.10894788387799446 7.261202658411427e-06 4.682084535012928e-07 0.115559913855976 0.028027022677523078 3.636983944145734e-11 10.439258616180455 -0.23554603680415054 (ac)SETAPLAPTIPAPAEKT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 7 SETAPLAPTIPAPAEKTPVK 20 1 P16402 P16402 HIST1H1D Histone H1.3 1 SETAPLAPT(0.003)IPAPAEKT(0.997)PVK;SETAPLAPT(0.011)IPAPAEKT(0.989)PVK;SETAPLAPT(0.001)IPAPAEKT(0.999)PVK;S(0.001)ET(0.001)APLAPT(0.001)IPAPAEKT(0.998)PVK;S(0.001)ET(0.001)APLAPT(0.006)IPAPAEKT(0.992)PVK;S(0.003)ET(0.003)APLAPT(0.004)IPAPAEKT(0.99)PVK;SETAPLAPTIPAPAEKT(0.999)PVK 85.855 8.3703e-12 0.0 3829840.0 5516630.0 3469910.0 2611340.0 2832810.0 4957960.0 3795530.0 4557560.0 4631780.0 5500000.0 True False 3617391.140603243 5251602.814169554 3693585.9506523022 2859520.968472004 3055736.030515912 4927015.532578114 4179219.2132031056 4541750.888102496 3790765.509672025 5451274.278935247 0.6635863388091707 0.9633715981715942 0.6775637698005796 0.5245600977227899 0.560554445466788 0.903828220791794 0.7666499609737851 0.8331539848678462 0.6953907133824212 1.0 22.378162080133734 -6.273273146074969 24.933418941401577 0.8248045320852699 0.6852446741834027 0.26659639099781374 0.13281101977543214 1291.9850564328674 2722168.458315621 0.049595237470415124 0.04408359522282357 5.329995641919209e-07 6.273273146074969 -0.1395598579018672 (ac)SETAPLAPTIPAPAEKT(ph)PVKK ddPTM_KYSE-520_SHP099_60min_R1 7 SETAPLAPTIPAPAEKTPVKK 21 2 P16402 P16402 HIST1H1D Histone H1.3 1 SETAPLAPTIPAPAEKT(1)PVKK;SETAPLAPTIPAPAEKT(1)PVKK;SETAPLAPTIPAPAEKT(1)PVKK;SETAPLAPT(0.002)IPAPAEKT(0.998)PVKK;SETAPLAPT(0.007)IPAPAEKT(0.993)PVKK;SETAPLAPTIPAPAEKT(1)PVKK;SETAPLAPT(0.001)IPAPAEKT(0.999)PVKK 93.96600000000001 4.329300000000001e-09 15577650000.0 11730820.0 14009610.0 10305960.0 8163510.0 8330670.0 12892530.0 10489890.0 11857210.0 12417280.0 15544040.0 True False 11080088.029790092 13336567.306746673 10970298.671719035 8939367.535951214 8986246.33397157 12812062.938028809 11550310.452660665 11816080.106003627 10162614.966155615 15406331.898680132 0.7191905317020548 0.8656549394401417 0.7120642826511394 0.580239838706646 0.583282665404698 0.8316102121054801 0.7497119060280784 0.7669625828985235 0.6596388441447409 1.0 23.877020074960058 -10.484793279188967 3.07373310022692 1.0072906623275506 0.7204292301187811 0.47492535588066953 0.08871514506701471 62988617.357920475 73723295.62094197 3888567.1047569048 0.023786851092097657 3.274965436037457e-11 10.484793279188967 -0.2868614322087695 (ac)SGYSS(ph)DRDR ddPTM_KYSE-520_SHP099_60min_R1 5 SGYSSDRDR 9 1 P17844-2;P17844;J3QR02;J3KRX8;J3QRQ7;X6RLV5;J3QKN9;J3QS79 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 S(0.003)GY(0.009)S(0.216)S(0.772)DRDR;S(0.007)GY(0.005)S(0.196)S(0.792)DRDR;SGYS(0.05)S(0.949)DRDR;S(0.001)GY(0.001)S(0.038)S(0.96)DRDR;SGYS(0.004)S(0.996)DRDR 66.19 0.00058677 10019053000.0 114012.0 155999.0 141712.4 79924.0 152958.5 171517.0 78832.8 124018.0 191437.0 170093.0 True False 107687.52708271284 148504.57388072702 150847.40805185708 87519.95292997322 164995.4637351848 170446.49878199914 86801.98875798588 123587.81050401882 156676.8665340504 168586.1083503517 0.6387686870315504 0.8808826262962801 0.894779584913186 0.5191409528719372 0.9787014205956704 1.0110352534372598 0.5148822142426825 0.7330841889248759 0.9293581070656678 1.0 17.36312613622244 -7.910688014273113 4.546597873759907 0.9973353249084085 0.7776503916964825 0.18190725835789656 0.1663768448785686 0.34588614188574773 11.76407355501376 0.16168710054993715 0.04237904251885933 1.228321307993187e-08 7.910688014273113 -0.21968493321192595 (ac)SKS(ph)ES(ph)PKEPEQLR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSESPKEPEQLR 13 2 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.233)KS(0.796)ES(0.972)PKEPEQLR 84.89200000000001 3.2827e-08 839780000.0 2402800.0 2315200.0 1936200.0 1812500.0 2106900.0 2026300.0 1958700.0 2135300.0 2505700.0 2081300.0 True False 2269511.8941369536 2203974.3168139528 2061010.550029535 1984759.4550520051 2272701.0433788295 2013653.1100821774 2156704.511069844 2127893.1426827665 2050728.0435567314 2062861.3012268988 1.1001766782803808 1.0684064486076337 0.9991028232502772 0.9621390705577529 1.1017226616385345 0.9761456617973033 1.045491769023507 1.0315250673504757 0.9941182387478251 1.0 20.976215392604338 -4.596332177671436 4.254519797448641 1.0161677215294531 1.0940191377281363 0.37161696240312836 0.03750848157575125 0.20586334766927894 7.000606172375517 0.00939812878241869 0.028744479677386744 2.533190334733119e-05 4.596332177671436 0.07785141619868319 (ac)SKS(ph)ES(ph)PKEPEQLRK ddPTM_KYSE-520_SHP099_60min_R1 2 SKSESPKEPEQLRK 14 3 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(0.364)KS(0.643)ES(0.993)PKEPEQLRK;S(0.319)KS(0.841)ES(0.841)PKEPEQLRK 57.52 8.6272e-05 3097500000.0 3487820.0 3582700.0 2964480.0 2882790.0 3314200.0 3116400.0 2698090.0 2818090.0 4367500.0 2936170.0 True False 3294343.671803206 3410581.7142576613 3155575.1241357066 3156769.494857583 3575008.684781488 3096949.391630118 2970839.268020847 2808314.70353715 3574472.0957153756 2910157.8181056916 1.1320154705381555 1.1719576488390278 1.0843312704565846 1.0847416848727531 1.2284586981982193 1.0641860631620366 1.0208516010841826 0.9650042640523068 1.2282743133298888 1.0 21.472665962053846 -6.494318154255659 24.28336188855652 1.0494594441969507 1.1369094985934962 0.2371818935923269 0.0758232229211721 724.0571594097023 615623.4998544295 0.026081229284550915 0.022952399233522026 3.203921344695954e-07 6.494318154255659 0.08745005439654552 (ac)SLYPS(ph)LEDLKVDK ddPTM_KYSE-520_SHP099_60min_R1 6 SLYPSLEDLKVDK 13 1 B4DHN5;E9PBU7;O00560-2;O00560 B4DHN5 SDCBP Syntenin-1 1 S(0.017)LY(0.014)PS(0.97)LEDLKVDK;S(0.047)LY(0.041)PS(0.913)LEDLKVDK;S(0.05)LY(0.041)PS(0.91)LEDLKVDK;S(0.001)LY(0.003)PS(0.996)LEDLKVDK;SLYPS(1)LEDLKVDK;S(0.014)LY(0.012)PS(0.974)LEDLKVDK 117.07 4.8651e-06 4112130000.0 6197270.0 6652370.0 5280360.0 4402710.0 4864270.0 6428040.0 4802100.0 5845820.0 7814700.0 6277040.0 True False 5853495.079148543 6332780.1597890565 5620740.45447472 4821142.2346769655 5247060.375089623 6387920.217999625 5287543.131979628 5825542.214844648 6395747.472555679 6221430.309063223 0.9408600254866343 1.0178977896069368 0.9034482707757036 0.7749250566471261 0.843384899360817 1.0267607126762899 0.8498918848736227 0.9363670290348096 1.0280188244234634 1.0 22.56881486392034 -7.649346599379426 4.649640785890724 1.0130150717484783 0.9082028513600268 0.24595342626547378 0.0728495818037244 0.32371429156307063 11.349583669123273 0.058511480222242084 0.02012325262333033 2.242091853094042e-08 7.649346599379426 -0.1048122203884515 (ac)SQPGQKPAAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 SQPGQKPAASPR 12 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;E9PSG1;F8W7E0 P20810-6 CAST Calpastatin 1 S(0.001)QPGQKPAAS(0.999)PR;SQPGQKPAAS(1)PR 57.425 0.00019631 6020900000.0 5653300.0 5560300.0 4432500.0 3473500.0 4043000.0 5241400.0 4329900.0 5549500.0 6108000.0 5284400.0 True False 5339700.179425849 5293174.841819545 4718226.042250749 3803620.3956541405 4361161.098476721 5208686.478401392 4767608.547751734 5530250.079763036 4998941.170149861 5237584.32720099 1.0194967461802051 1.0106137698499382 0.9008401101528821 0.726216545268843 0.8326665168572785 0.994482599802829 0.9102685990164449 1.055878002964479 0.9544364076752417 1.0 22.32047013628992 -6.776369682392395 1.841115546328523 0.997235474463249 0.8996863062217892 0.1655082060626878 0.08721435223406236 0.6836749487503502 4.7372041645484595 0.051779392085315436 0.03202213844597609 1.6735177291454658e-07 6.776369682392395 -0.09754916824145976 (ac)SQPGQKPAAS(ph)PRPR ddPTM_KYSE-520_SHP099_60min_R1 10 SQPGQKPAASPRPR 14 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;E9PSG1;F8W7E0 P20810-6 CAST Calpastatin 1 S(0.002)QPGQKPAAS(0.998)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;SQPGQKPAAS(1)PRPR;S(0.005)QPGQKPAAS(0.995)PRPR;S(0.004)QPGQKPAAS(0.996)PRPR;S(0.004)QPGQKPAAS(0.996)PRPR 101.08 1.466e-08 342200600000.0 14749590.0 15994650.0 12351350.0 10174730.0 10041920.0 13972430.0 10703370.0 14003030.0 16518960.0 13656160.0 True False 13931400.840121282 15226243.005540881 13147537.783858739 11141733.280055868 10832161.973290978 13885222.881560257 11785371.094424695 13954456.75726176 13519533.27309411 13535177.046731697 1.029273632108511 1.1249385917133252 0.9713606064010399 0.8231686398772472 0.80029702868989 1.0258619324756513 0.8707216059113521 1.030977039242446 0.9988442135936918 1.0 23.690210423044153 -4.915125973799606 5.755307859459091 0.9298860258701436 1.074737468289191 0.3194821015567584 0.08093044939776142 0.23165934558364795 12.176204615955562 0.022280182528409038 0.0475693364595998 1.2158332783347724e-05 4.915125973799606 0.14485144241904746 (ac)SRLS(ph)WGYR ddPTM_KYSE-520_SHP099_60min_R1 4 SRLSWGYR 8 1 Q8N1Q1 Q8N1Q1 CA13 Carbonic anhydrase 13 1 S(0.002)RLS(0.998)WGYR;S(0.134)RLS(0.866)WGYR;S(0.033)RLS(0.967)WGYR;S(0.134)RLS(0.866)WGYR 82.287 0.00021083 1514090000.0 301803.0 278453.0 229100.0 177140.0 233373.0 231202.0 221174.0 291581.0 293503.0 261667.0 True False 285061.3859606349 265075.6999135262 243868.15257296065 193975.33234091676 251738.12738926752 229758.98255797266 243532.42637022628 290569.5735665166 240210.253808529 259348.83395384566 1.0991427322606167 1.0220817108462485 0.9403094236250162 0.7479321552509354 0.9706545564576066 0.8859071354022787 0.9390149269518825 1.120381260778011 0.9262052585564252 1.0 17.98453435771909 -9.323761234155631 9.495814634901675 1.0000000140483118 0.9582696661678064 0.012315630053052806 0.10077221754949232 0.0 0.0 0.1027146248860863 0.02491195574711943 4.745027850745562e-10 9.323761234155631 -0.04173034788050545 (ac)SS(ph)SPVNVKK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPVNVKK 9 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.113)S(0.444)S(0.444)PVNVKK 47.938 0.013507 90319000000.0 55946000.0 61362000.0 49580000.0 34395000.0 34674000.0 46472000.0 38850000.0 44229000.0 60549000.0 45312000.0 True False 52842563.85441403 58414077.41376018 52776006.13080477 37663890.45876615 37402646.53192727 46181951.01008683 42777337.13946161 44075579.92212619 49554827.916077934 44910570.93220259 1.1766175035758428 1.3006754579438013 1.1751354978424993 0.83864198733131 0.8328250065756378 1.028309149750145 0.9525004080673716 0.9814076954991974 1.1034112211774452 1.0 25.42055172691735 -5.105428919092475 5.492907577975925 0.9594228943159221 1.2385891108061875 0.6765783586044338 0.08146145137800412 0.12849052619882986 5.5090251508291965 0.023391166601437734 0.041613401013716404 7.84460500898693e-06 5.105428919092475 0.2791662164902654 (ac)SSDASQGVITT(ph)PPPPSMPHK ddPTM_KYSE-520_SHP099_60min_R1 1 SSDASQGVITTPPPPSMPHK 20 0 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 SSDAS(0.001)QGVIT(0.111)T(0.883)PPPPS(0.005)MPHK 65.95100000000001 1.8241e-05 425040000.0 242230.0 453750.0 297320.0 250810.0 238600.0 359850.0 288700.0 346670.0 529150.0 416110.0 True False 228793.01902646633 431951.1689073649 316485.7229288199 274646.9069912236 257376.4625517057 357604.0426704202 317884.6134404778 345467.48268338596 433069.69878598547 412423.5891286815 0.5547525046029312 1.047348358079951 0.767380264541736 0.6659340402217637 0.6240585391719699 0.8670795078087619 0.7707721425732845 0.837652093114382 1.0500604480478979 1.0 18.653767326409803 -7.635107212784136 3.3540503708808886 1.027103794931387 0.7652784909772988 0.4002464617741742 0.1289382966842223 0.2566133653865049 5.381140966871875 0.10559308212205483 0.033728119694061205 2.3168226333352803e-08 7.635107212784136 -0.2618253039540882 (ac)SSILPFT(ph)PPVVK ddPTM_KYSE-520_SHP099_60min_R1 2 SSILPFTPPVVK 12 0 K7EJX0;B7Z5N5;Q15796-2;Q15796;K7ESI8;K7EL92;K7ERC7 K7EJX0 SMAD2 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 2 1 S(0.026)S(0.026)ILPFT(0.949)PPVVK;S(0.006)S(0.006)ILPFT(0.988)PPVVK 52.278 0.0023472 42065000.0 100586.0 179695.0 119973.0 87571.0 114075.0 159003.0 109900.0 138920.0 186050.0 171255.0 True False 95006.29406678022 171062.182472306 127706.65154358718 95893.72151081885 123052.05350203626 158010.60329783184 121009.76452063928 138438.11894417176 152268.00993883127 169737.81393437387 0.5597237991029667 1.007802436635859 0.752375964927666 0.5649520238778053 0.7249536838598155 0.9309098522909212 0.7129216626262523 0.8155997519662673 0.8970777130292429 1.0 17.37294847655027 -7.975206882187321 0.7646792043926954 1.0034636183724788 0.7478496819207129 0.28065809718404056 0.13093705174704384 0.994920545248034 1.3361414812265706 0.12869797272878342 0.04914494334746394 1.05874925516984e-08 7.975206882187321 -0.2556139364517659 (ac)VDYSVWDHIEVS(ph)DDEDETHPNIDTASLFR ddPTM_KYSE-520_SHP099_60min_R1 35 VDYSVWDHIEVSDDEDETHPNIDTASLFR 29 0 Q16543;K7EKQ2;K7EQA9;K7EJ06 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed 1 VDY(0.002)S(0.002)VWDHIEVS(0.995)DDEDET(0.001)HPNIDTASLFR;VDY(0.01)S(0.012)VWDHIEVS(0.978)DDEDETHPNIDTASLFR;VDY(0.01)S(0.029)VWDHIEVS(0.959)DDEDET(0.002)HPNIDTASLFR;VDY(0.001)S(0.004)VWDHIEVS(0.994)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDY(0.002)S(0.003)VWDHIEVS(0.993)DDEDET(0.002)HPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDY(0.003)S(0.006)VWDHIEVS(0.985)DDEDET(0.005)HPNIDTASLFR;VDYSVWDHIEVS(0.999)DDEDET(0.001)HPNIDTASLFR;VDY(0.038)S(0.04)VWDHIEVS(0.915)DDEDET(0.006)HPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDY(0.018)S(0.019)VWDHIEVS(0.963)DDEDETHPNIDTASLFR;VDY(0.004)S(0.007)VWDHIEVS(0.956)DDEDET(0.032)HPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDY(0.019)S(0.02)VWDHIEVS(0.959)DDEDET(0.002)HPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(0.992)DDEDET(0.007)HPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDY(0.001)S(0.001)VWDHIEVS(0.998)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDY(0.001)S(0.001)VWDHIEVS(0.998)DDEDET(0.001)HPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDYSVWDHIEVS(1)DDEDETHPNIDTASLFR;VDY(0.001)S(0.001)VWDHIEVS(0.97)DDEDET(0.026)HPNIDT(0.001)AS(0.001)LFR;VDY(0.001)S(0.001)VWDHIEVS(0.999)DDEDETHPNIDTASLFR;VDY(0.001)S(0.001)VWDHIEVS(0.998)DDEDET(0.001)HPNIDTASLFR 207.7 1.5360999999999997e-93 14508308000.0 522125.6 616607.8 632074.6000000001 556177.9 626078.9000000001 564593.6 485010.4999999999 555384.1999999998 837271.3 532088.3000000002 True False 493162.2521364212 586985.0357408234 672819.1400711181 609036.8803950176 675347.7475283452 561069.7619170381 534040.0945863281 553457.7018378469 685243.9378118684 527374.4116204333 0.9351273806044356 1.1130328336128934 1.2757902644608505 1.1548472337208486 1.2805849746354636 1.0638926530262836 1.0126393750227918 1.0494587709276013 1.2993499925534089 1.0 19.008468047300482 (ac)VNPTVFFDIAVDGEPLGR ddPTM_KYSE-520_SHP099_60min_R1 2 VNPTVFFDIAVDGEPLGR 18 0 P62937;C9J5S7;F8WE65;E5RIZ5 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ; 70.41199999999999 0.00010186 477800000.0 10840.5 8758.5 10102.9 11523.7 12715.2 7485.3 3537.6 9326.0 10309.4 3001.5 False True 10239.155854999006 8337.728513223474 10754.149099211543 12618.908983273262 13715.813900408417 7438.581466168944 3895.2151316488894 9293.650282704759 8437.472838824982 2974.909045131664 3.4418382880495226 2.8026835061958884 3.6149505534666138 4.241779762619523 4.610498570655084 2.500439964153501 1.3093560416656351 3.1240115720221757 2.8362120356696674 1.0 11.53862984479916 -7.9701827530258615 0.3921795327410218 0.9434356203463583 3.693926376736085 0.45471637424168154 0.8045611401725034 1.4500242663905922 0.6073435449621564 1.4371329487205213 0.7892184806258198 1.0710685000637774e-08 7.9701827530258615 2.7504907563897265 AAAAAAGSGT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 AAAAAAGSGTPR 12 0 Q9NR33 Q9NR33 POLE4 DNA polymerase epsilon subunit 4 1 AAAAAAGS(0.132)GT(0.868)PR;AAAAAAGS(0.02)GT(0.98)PR;AAAAAAGS(0.073)GT(0.927)PR 160.18 1.801e-05 1462939000.0 822039.0 927892.0 718560.0 818819.0 771250.0 847388.0 659989.0 951974.0 1241961.0 793264.0 True False 776438.8579758808 883314.6755257121 764879.5273366495 896639.3115730915 831942.987187774 842099.137169382 726707.1289919213 948671.8243864021 1016452.189689014 786236.2981100539 0.9875388096966218 1.1234722660973733 0.9728367021152018 1.1404196343114954 1.0581335270167371 1.0710509540116764 0.9242859058259862 1.206598864319555 1.2928075085471766 1.0 19.584603444526135 -7.2935502242761485 24.904643833630082 1.1872774381005984 1.0461202342197773 0.272536671128491 0.09266617561131102 744.5035348720304 577420.863434762 0.047675618153041756 0.022905776661093006 5.086859889112103e-08 7.2935502242761485 -0.1411572038808211 AAAAAATAPPS(ph)PGPAQPGPR ddPTM_KYSE-520_SHP099_60min_R1 2 AAAAAATAPPSPGPAQPGPR 20 0 Q6SPF0 Q6SPF0 SAMD1 Atherin 1 AAAAAATAPPS(1)PGPAQPGPR;AAAAAATAPPS(1)PGPAQPGPR 269.99 1.7538e-35 1573420000.0 1344810.0 1890290.0 1380460.0 1093150.0 1183420.0 1870490.0 1303590.0 1651170.0 1815090.0 1795480.0 True False 1270210.7084877295 1799477.6310168658 1469446.6604140939 1197042.6473324678 1276548.4212612736 1858815.5780869622 1435369.599012375 1645442.4766559743 1485515.4106953673 1779573.444062302 0.7137725687725311 1.0111848078094086 0.8257297080471883 0.6726570635938081 0.7173339350059341 1.0445287236045573 0.806580702696822 0.9246274617921126 0.8347592596708586 1.0 20.763100044289306 -6.242950162933776 24.99288488638759 0.9101685557977051 0.7962003305761206 0.2706400629107846 0.10868114797979954 1402.982746390239 1896489.6193967054 0.03700437650267171 0.03693885425030846 5.71544219943255e-07 6.242950162933776 -0.11396822522158445 AAAAPGAS(ph)PSPGGDAAWSEAGPGPRPLAR ddPTM_KYSE-520_SHP099_60min_R1 1 AAAAPGASPSPGGDAAWSEAGPGPRPLAR 29 1 P52701-2;P52701;P52701-3;F8WAX8;F8W7G9 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 AAAAPGAS(0.968)PS(0.032)PGGDAAWSEAGPGPRPLAR 107.29 0.00058008 1233900000.0 244510.0 309500.0 283150.0 181930.0 192690.0 290960.0 193970.0 308460.0 293000.0 291970.0 True False 230946.54288139893 294631.155431029 301402.30205601867 199220.572500751 207853.60674387348 289144.0107138681 213578.38056477119 307390.0242551056 239798.58592893058 289383.3729492231 0.7980643135358096 1.01813436075585 1.0415328945277877 0.68843130298197 0.7182638194639631 0.9991728542213204 0.7380464827267285 1.062224208399983 0.8286536420010802 1.0 18.142622506006457 -7.270060857983879 24.996449650057457 0.9590791761926916 0.8642489724121297 0.11745861845477845 0.1323518024019724 1725.2745806923074 5002096.958881377 0.07276737876771538 0.035809646872167714 5.369565470084675e-08 7.270060857983879 -0.09483020378056184 AAAAPGASPS(ph)PGGDAAWSEAGPGPRPLAR ddPTM_KYSE-520_SHP099_60min_R1 9 AAAAPGASPSPGGDAAWSEAGPGPRPLAR 29 1 P52701-2;P52701;P52701-3;F8WAX8;F8W7G9 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 AAAAPGAS(0.028)PS(0.972)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.033)PS(0.967)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.363)PS(0.637)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.441)PS(0.559)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.114)PS(0.886)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.226)PS(0.774)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.209)PS(0.791)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.055)PS(0.945)PGGDAAWSEAGPGPRPLAR;AAAAPGAS(0.449)PS(0.551)PGGDAAWSEAGPGPRPLAR 264.36 2.8859e-41 36577790000.0 4985010.0 5606610.0 4681450.0 3413480.0 3716650.0 5218950.0 3943400.0 4468330.0 5626550.0 5081410.0 True False 4708481.557928935 5337260.039906819 4983223.757584836 3737896.1128998175 4009129.2101542186 5186376.597178794 4342037.355875233 4452830.406146058 4604910.35378302 5036392.660677164 0.9348916725043158 1.0597386660453918 0.9894430584200758 0.7421772615317174 0.7960318982783948 1.029780032377671 0.8621324127041811 0.8841309060178315 0.9143271114933026 1.0 22.26395933600462 -5.034700396058022 24.641718381346955 0.8842090011708722 1.0041341786292888 0.24122945526607098 0.08475114346030113 630.8690270585421 447997.244196173 0.023253361185237326 0.04030425516426615 9.23208095155415e-06 5.034700396058022 0.11992517745841658 AAAGPLDMSLPST(ph)PDIK ddPTM_KYSE-520_SHP099_60min_R1 2 AAAGPLDMSLPSTPDIK 17 0 P17544-4;P17544-2;P17544;K7ELQ4 P17544-4 ATF7 Cyclic AMP-dependent transcription factor ATF-7 1 AAAGPLDMSLPS(0.015)T(0.985)PDIK;AAAGPLDMSLPS(0.152)T(0.848)PDIK 234.22 1.8049e-22 565830000.0 744230.0 1033940.0 682070.0 666060.0 689750.0 1131860.0 841610.0 1147400.0 1162220.0 1052270.0 True False 702946.0783142763 984267.9704244195 726037.323550586 729362.1421417588 744029.4008593414 1124795.6418978514 926688.1521220673 1143419.9372051726 951190.1451819873 1042947.706453672 0.6739993519948368 0.9437366459831616 0.6961397192380103 0.699327624605268 0.7133908979859206 1.0784775065304917 0.8885279160094025 1.0963348690732881 0.9120209376712786 1.0 19.992235392060756 -6.254706668390215 24.88904492013086 0.9944341564187421 0.7510548086507075 0.645205537779012 0.09255262211303766 327.13540136339196 1209333.9228762044 0.030067692804350985 0.02941417904006128 5.562798535038151e-07 6.254706668390215 -0.2433793477680346 AAAGVGGS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 2 AAAGVGGSLR 10 0 Q9BRK4 Q9BRK4 LZTS2 Leucine zipper putative tumor suppressor 2 1 AAAGVGGS(1)LR;AAAGVGGS(1)LR 99.53 0.0022189 363250000.0 590880.0 563680.0 552160.0 591230.0 518810.0 547680.0 522200.0 585700.0 662330.0 572900.0 True False 558102.7085099224 536599.9666990702 587753.1170872371 647420.3214402182 559637.3953748978 544261.7259684193 574989.0721808713 583668.3434034081 542067.5679805765 567824.5517094557 0.9828787903406688 0.945010153371525 1.0350963432591735 1.140176696289614 0.9855815386814286 0.9585033340490481 1.0126174897683564 1.027902618240536 0.954639186256852 1.0 19.115085704379187 -8.655386103342884 14.480985924862711 0.9999999996610623 1.0068266654245805 0.0 0.05381816559574666 0.0 0.0 0.055317862845000274 0.013416552440786284 2.2111280635152132e-09 8.655386103342884 0.006826665763518203 AAALSLSTLAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 AAALSLSTLASPK 13 0 P98172 P98172 EFNB1 Ephrin-B1 1 AAALSLSTLAS(0.999)PK 183.0 4.2588e-08 228740000.0 212300.0 276190.0 214270.0 218530.0 231880.0 340930.0 235540.0 364030.0 399650.0 284900.0 True False 200523.29579044244 262921.4178303581 228082.18704412153 239299.02549655945 250127.6367832754 338802.129408438 259350.6818488752 362767.26489524037 327083.63435664546 282376.0076488457 0.710128659513478 0.9311039561028117 0.8077250930176676 0.8474481507442534 0.8857963495762946 1.1998261900131475 0.9184586325457078 1.2846957782134478 1.1583265769639919 1.0 18.107257988270838 -6.144740422220684 4.707688639722726 1.1173152074756645 0.8345257204746772 0.6227138606043008 0.10782881274900376 0.15290861816260226 5.269827180257805 0.035226731312662345 0.035316617689927124 7.165715770204534e-07 6.144740422220684 -0.28278948700098727 AAATGNAS(ph)PGKLEHSK ddPTM_KYSE-520_SHP099_60min_R1 6 AAATGNASPGKLEHSK 16 1 H0Y6H0;Q8NB78 H0Y6H0 KDM1B Lysine-specific histone demethylase 1B 1 AAATGNAS(1)PGKLEHSK;AAATGNAS(1)PGKLEHSK;AAATGNAS(1)PGKLEHSK;AAATGNAS(0.998)PGKLEHS(0.002)K;AAATGNAS(1)PGKLEHSK;AAATGNAS(1)PGKLEHSK 178.56 8.6079e-09 19689870000.0 6691880.0 5950010.0 5466750.0 5239180.0 5603120.0 6002780.0 5604250.0 5765650.0 7418460.0 5626140.0 True False 6320668.076467949 5664162.588452913 5819145.452109265 5737110.091983093 6044053.666608184 5965314.423401819 6170782.282209216 5745650.305862826 6071454.668158137 5576296.776670691 1.1334884654833028 1.0157570185557236 1.0435501705100363 1.0288387296718478 1.0838830694762207 1.0697627228806479 1.106609373451149 1.0303702503605354 1.088796904346809 1.0 22.410875914396602 -4.2416937367478935 24.363756861218068 1.055178720895676 1.1334885685126737 0.35173035774591643 0.03294718239841652 3818.3796333214004 4711322.013852954 0.008054292722081252 0.2884670904372155 5.73200107602486e-05 4.2416937367478935 0.07830984761699766 AAAYDIS(ph)EDEED ddPTM_KYSE-520_SHP099_60min_R1 2 AAAYDISEDEED 12 0 P49585 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 AAAYDIS(1)EDEED;AAAYDIS(1)EDEED 125.74 0.00010411 323160000.0 762680.0 848160.0 548950.0 601210.0 582290.0 764390.0 672440.0 742190.0 804940.0 762810.0 True False 720372.6200351135 807413.1204858852 584336.1953510554 658348.8176396227 628112.9102231046 759619.1584739262 740416.7975819701 739615.5161184478 658783.1868861207 756052.0968571989 0.9528081768830483 1.0679331805866115 0.7728782153770327 0.8707717634489544 0.8307799328036795 1.0047180103481694 0.9793198122983555 0.9782599892162516 0.8713462863532669 1.0 19.528126123285233 -6.278792713035738 24.881596419303367 0.9661570024400975 0.8998387131761533 0.15030769729488658 0.08045843877796775 1728.4528885898774 2478287.133832066 0.030002657739057838 0.026517436960699626 5.262683921874307e-07 6.278792713035738 -0.06631828926394423 AADDGEGIVGAAMPDSGPLPLLQDMNKLS(ph)GGGGR ddPTM_KYSE-520_SHP099_60min_R1 2 AADDGEGIVGAAMPDSGPLPLLQDMNKLSGGGGR 34 1 P29353;P29353-6 P29353 SHC1 SHC-transforming protein 1 1 AADDGEGIVGAAMPDS(0.003)GPLPLLQDMNKLS(0.997)GGGGR;AADDGEGIVGAAMPDS(0.001)GPLPLLQDMNKLS(0.999)GGGGR 142.83 9.218799999999999e-07 172505000.0 61403.0 71063.0 50149.0 36577.0 47706.0 58153.0 41502.0 52249.0 66724.0 53380.0 True False 57996.85318615414 67649.02681226243 53381.68478123703 40053.26708272396 51460.19078999024 57790.045556239915 45697.42718048741 52067.76041400829 54608.60357516037 52907.09472901158 1.0962018134469893 1.2786380949239142 1.0089702535105411 0.757049074190815 0.9726519865354102 1.0922929306974547 0.8637296645099896 0.984135694479118 1.0321603152632717 1.0 15.691173577201592 -4.903388552562756 6.185810875729471 0.9536461966932988 1.184129189345393 0.46950465471058367 0.09618217296777662 0.16841857192036339 8.990455256403392 0.025424573706767914 0.054046790488341115 1.2491409545281668e-05 4.903388552562756 0.23048299265209415 AADEDWDS(ph)ELEDDLLGEDLLSGK ddPTM_KYSE-520_SHP099_60min_R1 4 AADEDWDSELEDDLLGEDLLSGK 23 0 Q96EV2;A8MTF7;Q96EV2-2 Q96EV2 RBM33 RNA-binding protein 33 1 AADEDWDS(1)ELEDDLLGEDLLSGK;AADEDWDS(1)ELEDDLLGEDLLSGK;AADEDWDS(1)ELEDDLLGEDLLSGK;AADEDWDS(1)ELEDDLLGEDLLSGK 216.8 4.3766e-21 253205000.0 180292.0 200499.0 165923.0 150131.0 180911.0 170947.0 147098.0 200066.0 239773.0 180543.0 True False 170290.84335680827 190866.72708486556 176618.6620661866 164399.40510146887 195147.66645721567 169880.05636343014 161968.1013781345 199372.01774175564 196236.26738545237 178943.52948032843 0.9516457166758222 1.0666310631022167 0.9870078151420535 0.9187222671806168 1.0905544728213745 0.9493500930532688 0.905135278422794 1.1141616482068604 1.0966379614582542 1.0 17.449144851913296 -7.279724121966312 24.938249447707605 1.0790498557793422 0.9853617582277299 0.29566843454264924 0.0622693378266228 1004.0778089241292 1369437.3466432658 0.03364632785802173 0.016210217020460375 5.251409409900743e-08 7.279724121966312 -0.09368809755161234 AADEDWDS(ph)ELEDDLLGEDLLSGKK ddPTM_KYSE-520_SHP099_60min_R1 9 AADEDWDSELEDDLLGEDLLSGKK 24 1 Q96EV2;A8MTF7;Q96EV2-2 Q96EV2 RBM33 RNA-binding protein 33 1 AADEDWDS(1)ELEDDLLGEDLLSGKK;AADEDWDS(1)ELEDDLLGEDLLSGKK;AADEDWDS(1)ELEDDLLGEDLLSGKK;AADEDWDS(1)ELEDDLLGEDLLSGKK;AADEDWDS(1)ELEDDLLGEDLLSGKK;AADEDWDS(1)ELEDDLLGEDLLSGKK;AADEDWDS(1)ELEDDLLGEDLLSGKK;AADEDWDS(1)ELEDDLLGEDLLSGKK;AADEDWDS(1)ELEDDLLGEDLLSGKK 274.3 3.9578999999999995e-38 1208656000.0 1446442.0 1573490.0 1491871.0 1205194.0 1299706.0 1277380.0 1021498.0 1188773.0 1996109.0 1242577.0 True False 1366204.978849359 1497897.178543358 1588039.3917379966 1319735.2754052104 1401985.4678844383 1269407.3975999483 1124760.9866997635 1184649.4239247052 1633665.9234130115 1231568.7344902772 1.1093209340157577 1.216251384591465 1.2894443868739942 1.071588810632988 1.1383737087680237 1.0307239555941892 0.9132750411736301 0.9619028079784836 1.3264918779292936 1.0 20.23206571696701 -5.681164192888094 1.7685402432226685 1.0419259026304166 1.201051503124826 0.21956450341195388 0.11568310138405534 0.5117840484779931 3.2956920290994716 0.0407623960921037 0.057706908353383705 2.0837029525520298e-06 5.681164192888094 0.15912560049440927 AADGGERPLAAS(ph)PPGTVK ddPTM_KYSE-520_SHP099_60min_R1 2 AADGGERPLAASPPGTVK 18 1 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785;O95785-2 M0QXA7 WIZ Protein Wiz 1 AADGGERPLAAS(0.946)PPGT(0.054)VK;AADGGERPLAAS(0.982)PPGT(0.018)VK 70.391 0.010265999999999999 1016430000.0 1103810.0 1165050.0 935450.0 893100.0 837870.0 1177120.0 957510.0 1139510.0 1319910.0 1212210.0 True False 1042579.4589093168 1109079.2492242968 995750.6037729203 977979.9554796942 903805.602171825 1169773.1574495062 1054304.4551970623 1135557.305773633 1080247.6162233946 1201470.7624851097 0.8677526673665003 0.9231013220249228 0.8287763921223684 0.8139856466060402 0.7522493517049078 0.9736176642617249 0.8775115367904167 0.9451393585515623 0.8991043727015225 1.0 20.196370110566846 -6.280689414658626 24.996029301704084 0.9317981051922003 0.8401921856125402 0.48922950238151597 0.05174826867732754 840.2165842747662 1091011.7628262425 0.01895727423570306 0.016743160872255452 5.239750229337241e-07 6.280689414658626 -0.09160591957966013 AADIS(ph)LDNLVEGK ddPTM_KYSE-520_SHP099_60min_R1 3 AADISLDNLVEGK 13 0 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 AADIS(1)LDNLVEGK;AADIS(1)LDNLVEGK;AADIS(1)LDNLVEGK 220.6 2.0329000000000004e-11 1444050000.0 2081910.0 2022470.0 1710320.0 1484590.0 1634520.0 1926800.0 1629230.0 1841710.0 2029250.0 1974010.0 True False 1966422.3021153084 1925307.5054106407 1820569.9638087552 1625684.9872417408 1763147.4248533694 1914774.1264898307 1793928.468152512 1835321.5378683456 1660789.3532296328 1956521.8071565412 1.005060252802986 0.9840460241067975 0.9305135047048783 0.8309056312561048 0.9011642080370127 0.9786622972900142 0.916896740731794 0.9380531978509666 0.8488478621371958 1.0 20.899859759757753 -4.760274602983824 3.7601827425540235 0.913535468038216 0.9987071508197515 0.28760976830487617 0.04861807663355116 0.25830800028564993 7.840567509207522 0.012875608352452555 0.034486214000725386 1.7367023702681783e-05 4.760274602983824 0.08517168278153553 AADIS(ph)LDNLVEGKR ddPTM_KYSE-520_SHP099_60min_R1 2 AADISLDNLVEGKR 14 1 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 AADIS(1)LDNLVEGKR;AADIS(1)LDNLVEGKR 133.78 6.429400000000001e-06 266810000.0 455700.0 509950.0 489760.0 295560.0 370210.0 385870.0 270760.0 260260.0 553860.0 367570.0 True False 430421.41258457204 485451.2365494448 521330.71324370714 323649.93353664567 399343.4207932395 383461.6421987907 298131.06316295074 259357.21880514082 453292.9856743949 364313.615765133 1.181458485103828 1.332509177648763 1.4309943155673888 0.8883827546684323 1.0961528845265274 1.0525591841892676 0.8183363186599947 0.7119064662473229 1.2442383870896152 1.0 18.47482138944547 -5.265345447529132 24.981971910691318 0.9630701125164955 1.3167395165523943 0.5184539072167182 0.15078190220332385 257.6570974612314 1647896.7053621884 0.04280987452111096 0.06628201643246176 5.428183898582308e-06 5.265345447529132 0.35366940403589875 AADKS(ph)PESQNLIDGTK ddPTM_KYSE-520_SHP099_60min_R1 7 AADKSPESQNLIDGTK 16 1 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 AADKS(0.998)PES(0.002)QNLIDGTK;AADKS(0.999)PES(0.001)QNLIDGTK;AADKS(0.997)PES(0.003)QNLIDGTK;AADKS(0.88)PES(0.118)QNLIDGT(0.001)K;AADKS(0.946)PES(0.054)QNLIDGTK;AADKS(0.99)PES(0.01)QNLIDGTK;AADKS(0.97)PES(0.03)QNLIDGTK 261.82 1.7869999999999998e-29 4683530000.0 4608800.0 4214490.0 4077220.0 3949390.0 3987200.0 4047470.0 3960440.0 4244270.0 5017320.0 4104340.0 True False 4353140.676584979 4012019.574321543 4340044.124982661 4324738.838172597 4300969.955935291 4022208.2383972374 4360799.925369614 4229547.61799006 4106301.1643445105 4067978.7407281986 1.070099170627852 0.9862439875001316 1.0668797458380426 1.0631173646198644 1.0572744426794585 0.9887485886116583 1.0719819849867254 1.0397172373700605 1.009420507347453 1.0 21.95588070900972 -7.808735546832652 3.9539916916764852 1.001237405098205 1.0423718413136476 0.2109341729374682 0.029885990975911044 0.3424302213536624 10.34847007838333 0.027213414536341456 0.007449828291339225 1.5533325865115822e-08 7.808735546832652 0.04113443621544266 AADRLPNLSS(ph)PSAEGPPGPPSGPAPR ddPTM_KYSE-520_SHP099_60min_R1 5 AADRLPNLSSPSAEGPPGPPSGPAPR 26 1 O60784-4;O60784;O60784-2;O60784-3 O60784-4 TOM1 Target of Myb protein 1 1 AADRLPNLS(0.207)S(0.787)PS(0.006)AEGPPGPPSGPAPR;AADRLPNLS(0.318)S(0.68)PS(0.002)AEGPPGPPSGPAPR;AADRLPNLS(0.16)S(0.831)PS(0.009)AEGPPGPPSGPAPR;AADRLPNLS(0.147)S(0.845)PS(0.008)AEGPPGPPSGPAPR;AADRLPNLS(0.207)S(0.789)PS(0.004)AEGPPGPPSGPAPR 153.25 3.6991e-07 7545550000.0 778066.0 944021.0 733347.0 594009.0 657276.0 913411.0 708704.0 841945.0 1083553.0 949770.0 True False 734905.1279438819 898668.8141555904 780619.7210166865 650463.436764682 708999.8818111278 907710.063136394 780346.7166045046 839024.4893064396 886807.089348295 941355.7767098779 0.7806879674254942 0.9546537413267041 0.8292504707890802 0.6909857599621999 0.7531688861454119 0.9642582385895813 0.8289604588521098 0.8912937170672122 0.9420530593095892 1.0 19.844380553701548 -7.629357708748085 0.7777443236354527 0.9986980088714364 0.818227589455923 0.37666874538453865 0.07703097315352371 0.7302817908605563 0.9270589507628825 0.0785881326418853 0.03194153186321877 2.3476983312096337e-08 7.629357708748085 -0.18047041941551345 AADS(ph)DDGAVSAPAASDGGVSK ddPTM_KYSE-520_SHP099_60min_R1 5 AADSDDGAVSAPAASDGGVSK 21 0 Q96GM8 Q96GM8 TOE1 Target of EGR1 protein 1 1 AADS(1)DDGAVSAPAASDGGVSK;AADS(1)DDGAVSAPAASDGGVSK;AADS(1)DDGAVSAPAASDGGVSK;AADS(1)DDGAVSAPAASDGGVSK;AADS(1)DDGAVSAPAASDGGVSK 500.13 2.0304999999999994e-163 3209050000.0 6239180.0 6113490.0 5279820.0 4679940.0 5005950.0 5805280.0 5154260.0 5609590.0 6718780.0 5656030.0 True False 5893080.247903016 5819788.763864433 5620165.645210694 5124720.090524727 5399889.785040699 5769047.094160722 5675302.9015300255 5590131.641578152 5498818.91866069 5605921.974524755 1.0512240938570332 1.0381501544815577 1.0025408257108583 0.9141618655795111 0.9632474032959543 1.0290987138917138 1.01237636330305 0.9971832763605416 0.9808946581221112 1.0 22.418520233824875 -4.799325572582315 3.8854405401236543 0.9854457968032205 1.0466038542770042 0.38620148763832474 0.029486594627659218 0.23363468009664767 7.378351968834304 0.008721366465135553 0.021756721679389017 1.5873563271669045e-05 4.799325572582315 0.06115805747378367 AAEAGGAEEQYGFLTT(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 10 AAEAGGAEEQYGFLTTPTK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAEAGGAEEQYGFLT(0.017)T(0.966)PT(0.017)K;AAEAGGAEEQYGFLT(0.008)T(0.991)PT(0.001)K;AAEAGGAEEQYGFLTT(0.903)PT(0.096)K;AAEAGGAEEQYGFLT(0.034)T(0.66)PT(0.307)K;AAEAGGAEEQY(0.004)GFLT(0.031)T(0.92)PT(0.045)K;AAEAGGAEEQYGFLT(0.144)T(0.832)PT(0.024)K;AAEAGGAEEQYGFLT(0.013)T(0.824)PT(0.164)K;AAEAGGAEEQYGFLT(0.039)T(0.943)PT(0.018)K;AAEAGGAEEQYGFLT(0.026)T(0.969)PT(0.005)K;AAEAGGAEEQYGFLT(0.008)T(0.977)PT(0.015)K 324.43 3.8447e-53 9050430000.0 5854070.0 7947990.0 5452860.0 5168510.0 5172760.0 7421370.0 5436760.0 7440100.0 8145140.0 7838420.0 True False 5529333.067300776 7566156.630223787 5804360.080484477 5659723.636430804 5579826.783021625 7375050.477012579 5986360.758464326 7414292.029632386 6666187.8982702065 7768977.696998482 0.7117195187002552 0.973893467752771 0.7471201883778057 0.7285030099413747 0.7182189215419388 0.9492948447852934 0.7705467813065208 0.9543459022281493 0.8580521348189306 1.0 22.88929333932088 -7.632707291909421 0.6572289461183104 0.9911803374424828 0.7908871327862199 0.3260835708525782 0.09215893077812665 0.856154124986652 0.8253527125630089 0.08916458399413113 0.04072623530820728 2.3296608858107798e-08 7.632707291909421 -0.20029320465626288 AAEDDEDDDVDTK ddPTM_KYSE-520_SHP099_60min_R1 6 AAEDDEDDDVDTK 13 0 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 0 ;;;;; 350.47 1.6931999999999996e-70 3846870000.0 3410190.0 3479830.0 11287350.0 2208666.0 4136810.0 3671610.0 3308000.0 2670838.0 7466920.0 4262390.0 False True 3221019.962654771 3312653.743468679 12014950.641398547 2418576.9525803556 4462353.411770836 3648694.120075422 3642404.922968827 2661573.486356273 6111115.553735328 4224628.540689245 0.7624386219123691 0.7841289977481007 2.8440253446373576 0.5724945824907405 1.0562711890032366 0.8636721749458569 0.8621834766979469 0.6300136120185467 1.446545061862008 1.0 22.010393064313078 AAEDDEDDDVDTKK ddPTM_KYSE-520_SHP099_60min_R1 9 AAEDDEDDDVDTKK 14 1 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 0 ;;;;;;;; 224.16 9.3643e-14 20129930000.0 12400810.0 13994380.0 13562270.0 7414509.0 12252660.0 13064430.0 9450110.0 12339750.0 15085100.0 12744640.0 False True 11712912.348898133 13322068.978807366 14436515.624599257 8119181.7061065845 13216874.633901004 12982890.046365755 10405419.342985783 12296946.287369298 12346026.104424957 12631732.404779896 0.9272609625949583 1.0546509815048206 1.1428769357983253 0.6427607430184521 1.0463231970382532 1.0277996422290405 0.8237523571231078 0.9734964210226688 0.977381859336505 1.0 23.590549178268827 AAEEQGDDQDS(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 4 AAEEQGDDQDSEK 13 0 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 AAEEQGDDQDS(1)EK;AAEEQGDDQDS(1)EK;AAEEQGDDQDS(1)EK;AAEEQGDDQDS(1)EK 305.05 1.9391999999999999e-31 2196840000.0 4052600.0 3283520.0 2884800.0 3469520.0 3505800.0 3579400.0 3759780.0 3537590.0 3914650.0 3418990.0 True False 3827794.199342185 3125774.7705360004 3070758.823843197 3799262.137650775 3781686.514726609 3557059.636888989 4139855.254316736 3525318.9259697115 3203848.2402958656 3388700.4085339657 1.1295758662236484 0.9224110702333485 0.9061759535041582 1.1211561010477253 1.1159695631997928 1.049682535502706 1.2216645779281912 1.040315903138469 0.9454504246605643 1.0 21.692300664621207 -3.92209378965255 19.918728381592686 1.043394973408822 4.200118157009 0.07743210798735911 0.09385379729389703 1172.6680107898749 302374.2983104038 0.02426453108415778 1404.9974886599591 0.00011964821127355832 3.92209378965255 3.156723183600178 AAEEQGDDQDS(ph)EKSKPAGSDGER ddPTM_KYSE-520_SHP099_60min_R1 6 AAEEQGDDQDSEKSKPAGSDGER 23 2 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 AAEEQGDDQDS(1)EKSKPAGSDGER;AAEEQGDDQDS(1)EKSKPAGSDGER;AAEEQGDDQDS(0.999)EKS(0.001)KPAGSDGER;AAEEQGDDQDS(1)EKSKPAGSDGER;AAEEQGDDQDS(0.945)EKS(0.055)KPAGSDGER;AAEEQGDDQDS(0.999)EKS(0.001)KPAGSDGER 213.47 6.0683e-21 6083759000.0 4145551.0 3462091.0 3147287.0 3343141.0 3724117.0 3324623.0 3245017.0 3482789.0 4415634.0 3416445.0 True False 3915589.0220789625 3295766.951655462 3350166.155857244 3660872.115488003 4017183.8205728023 3303872.7946507134 3573054.9866739837 3470708.017848062 3613866.1746747755 3386177.955253991 1.1563447266566538 0.9732999845863838 0.9893650599960729 1.0811221866847833 1.1863475203185183 0.9756937876003909 1.0551881897199273 1.024963266464751 1.067240476557797 1.0 21.69122636311773 -9.152740136663935 8.284106942933477 0.9999910748089901 1.0533728115046215 0.056493331605499186 0.0682648569889518 0.0 0.0 0.06608513608404164 0.016027999785754164 7.034931343261648e-10 9.152740136663935 0.0533817366956314 AAEEQGDDQDSEKS(ph)KPAGSDGERR ddPTM_KYSE-520_SHP099_60min_R1 1 AAEEQGDDQDSEKSKPAGSDGERR 24 3 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 AAEEQGDDQDS(0.071)EKS(0.474)KPAGS(0.455)DGERR 59.555 0.044399 1625600000.0 542210.0 567220.0 578530.0 435480.0 513040.0 480360.0 411040.0 383000.0 629150.0 408830.0 True False 512132.53043116204 539969.8997854224 615822.9694807291 476867.8882681643 553413.3292017059 477361.8950595058 452591.93456381775 381671.46239287243 514912.21958084265 405208.0842649274 1.263875402091748 1.3325743506943135 1.5197697020232706 1.1768469257794603 1.3657509578211697 1.1780660692529614 1.1169370803271301 0.941914727800281 1.270735307551737 1.0 18.628303431923776 -6.487362066906716 2.0072683891421446 1.0731643271609081 1.3375135305353203 0.5178684694505775 0.11370058531112498 0.2635641821567017 2.1224383880396824 0.04866573287851078 0.03818574429739055 3.255651674508046e-07 6.487362066906716 0.26434920337441214 AAEEQGDDQDSEKSKPAGS(ph)DGERR ddPTM_KYSE-520_SHP099_60min_R1 1 AAEEQGDDQDSEKSKPAGSDGERR 24 3 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 AAEEQGDDQDS(0.192)EKS(0.265)KPAGS(0.543)DGERR 161.24 4.4239999999999994e-10 1018700000.0 698040.0 652470.0 713600.0 489620.0 595520.0 542130.0 462650.0 507050.0 882020.0 500950.0 True False 659318.3296917592 621124.3618225636 759599.7978003699 536153.3375903788 642384.035954701 538746.3655770872 509419.17702887877 505291.1618963595 721867.401914797 496511.9727332025 1.3279001633381349 1.2509755976344215 1.5298720665665315 1.079839695786102 1.293793646945714 1.0850621841229577 1.0259957564056805 1.0176817270182414 1.4538771299734352 1.0 18.921468981303367 -5.281509597571939 24.982444834509284 1.1371368151071384 1.3577219294100193 0.34228438896262314 0.14771888626403407 915.9762547138844 1140161.2699549734 0.040982036716653854 0.06087069736047839 5.229864084595724e-06 5.281509597571939 0.22058511430288097 AAELEMELNEHSLVIDTLK ddPTM_KYSE-520_SHP099_60min_R1 2 AAELEMELNEHSLVIDTLK 19 0 Q9UHV9 Q9UHV9 PFDN2 Prefoldin subunit 2 0 ; 140.16 5.132e-06 284940000.0 349980.0 261700.0 223975.0 396530.0 314410.0 215197.0 246770.0 337060.0 286770.0 203308.0 False True 330565.9117321668 249127.5391802918 238412.78687267058 434216.0919789083 339152.2782518096 213853.87569972588 271715.91984311334 335890.8175303951 234699.79688341127 201506.84929123073 1.6404698544733411 1.236322934215683 1.183149792234114 2.154845324147524 1.6830806468600221 1.0612734825239138 1.3484202685855702 1.6668952877375596 1.164723669239689 1.0 17.620469351753595 -6.244595066584928 24.728194146618822 1.2962033328895635 1.5704402029860074 0.221786118055607 0.30349697458016295 1458.4022855264661 2140999.258907861 0.10652388705779633 0.10624722684659306 5.693835730468793e-07 6.244595066584928 0.27423687009644393 AAESET(ph)PGKS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 1 AAESETPGKSPEK 13 1 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 2 AAES(0.106)ET(0.894)PGKS(1)PEK 123.14 7.0128e-05 493660000.0 624350.0 534490.0 514310.0 551180.0 505580.0 495370.0 507510.0 629890.0 670780.0 567530.0 True False 589716.0608891319 508812.2981141539 547463.2455250954 603563.9814816904 545366.2696433004 492278.21208182815 558814.0636202872 627705.0586074311 548983.2609877413 562502.1257316594 1.0483801463364688 0.9045517782752023 0.9732643140023648 1.072998578799362 0.9695363709673632 0.8751579586326197 0.9934434699129804 1.1159158870572459 0.9759665535017601 1.0 19.101499022814004 -7.012721228523019 24.862911823984224 1.0385006733764959 0.9716924986402913 0.13035923044121533 0.06431466685778547 1006.1581689263658 1966473.895117736 0.029103877136996355 0.017872114021423243 9.71133132768804e-08 7.012721228523019 -0.0668081747362046 AAESET(ph)PGKS(ph)PEKKPK ddPTM_KYSE-520_SHP099_60min_R1 6 AAESETPGKSPEKKPK 16 3 O76021-2;O76021 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 2 AAES(0.157)ET(0.843)PGKS(1)PEKKPK;AAES(0.1)ET(0.9)PGKS(1)PEKKPK;AAES(0.007)ET(0.993)PGKS(1)PEKKPK;AAES(0.421)ET(0.586)PGKS(0.994)PEKKPK;AAES(0.012)ET(0.989)PGKS(0.999)PEKKPK;AAES(0.086)ET(0.914)PGKS(1)PEKKPK 128.41 0.0002053 21087800000.0 10989430.0 9762380.0 9806310.0 8871790.0 8550580.0 7911710.0 7912910.0 8799230.0 11262570.0 8057320.0 True False 10379824.411014412 9293380.61116888 10438440.433250751 9714962.254199069 9223461.999854831 7862330.083190197 8712824.165359516 8768707.52488572 9217571.19428531 7985938.413300106 1.299762642011793 1.1637180416632449 1.3071025461285988 1.2165085368075688 1.154962826221362 0.9845217526466211 1.0910207059509531 1.0980184257722245 1.1542251789638138 1.0 22.929030515428728 -5.895660848481387 3.0319445492386725 1.0728651006280776 1.246952038954087 0.6710693742571894 0.05952978025853323 0.15864655764103458 2.928577091053054 0.01928775184145753 0.022288019222399987 1.2715667161121908e-06 5.895660848481387 0.1740869383260093 AAESET(ph)PGKSPEK ddPTM_KYSE-520_SHP099_60min_R1 1 AAESETPGKSPEK 13 1 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAES(0.007)ET(0.987)PGKS(0.007)PEK 241.76 4.2706e-18 1407700000.0 2906300.0 2245600.0 2068800.0 2020100.0 2152000.0 2448200.0 2475500.0 2748600.0 2455700.0 2407000.0 True False 2745081.7454345864 2137718.005285683 2202158.1581970374 2212089.696634786 2321350.156794933 2432919.8756863177 2725747.6985517982 2739065.748128063 2009806.783159302 2385675.852617665 1.1506516035791559 0.8960638985971576 0.9230751762779238 0.9272381636455712 0.9730366991172957 1.0198032029442785 1.1425473815149665 1.1481298874374084 0.8424475525264912 1.0 21.18596660330885 -6.3412444654329825 3.9404124600683557 1.049219301063189 0.9639499415455235 0.05659954258619959 0.10318610572777093 0.5146864675073454 15.15960259764559 0.03760629660292775 0.03318977380003738 4.557802838848512e-07 6.3412444654329825 -0.08526935951766546 AAESETPGKS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 10 AAESETPGKSPEK 13 1 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAES(0.004)ET(0.001)PGKS(0.996)PEK;AAESET(0.045)PGKS(0.955)PEK;AAESET(0.001)PGKS(0.999)PEK;AAESET(0.042)PGKS(0.958)PEK;AAESET(0.03)PGKS(0.97)PEK;AAESET(0.002)PGKS(0.998)PEK;AAESETPGKS(1)PEK;AAESET(0.068)PGKS(0.932)PEK;AAESETPGKS(1)PEK;AAESETPGKS(1)PEK 281.93 8.1764e-30 87791200000.0 61161700.0 47435000.0 43225360.0 43032800.0 44812730.0 51710200.0 50900900.0 56897300.0 55207200.0 54863400.0 True False 57768938.57817383 45156151.39861344 46011735.86862139 47122624.37371693 48339236.9014447 51387457.46087518 56046459.71691179 56699936.54622963 45182964.140258275 54377352.95907934 1.0623712894161428 0.8304220220611852 0.8461562280026146 0.8665854773986181 0.8889589925022922 0.9450157954460536 1.0306948879819233 1.0427123326304262 0.8309151086162629 1.0 25.69650258817889 -6.419206603629967 3.877149645576934 0.9805508198604802 0.8906698244183251 0.16434131927349072 0.0806149160268684 0.38624514844903923 10.354453049348804 0.02975109436197579 0.025550321555206985 3.808845849440477e-07 6.419206603629967 -0.08988099544215511 AAESETPGKS(ph)PEKKPK ddPTM_KYSE-520_SHP099_60min_R1 7 AAESETPGKSPEKKPK 16 3 O76021-2;O76021 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AAES(0.001)ET(0.172)PGKS(0.827)PEKKPK;AAESET(0.001)PGKS(0.999)PEKKPK;AAES(0.016)ET(0.212)PGKS(0.772)PEKKPK;AAESET(0.007)PGKS(0.993)PEKKPK;AAES(0.003)ET(0.013)PGKS(0.984)PEKKPK;AAESETPGKS(1)PEKKPK;AAESET(0.058)PGKS(0.941)PEKKPK 225.9 8.4573e-16 46369800000.0 36366880.0 30806960.0 29763310.0 27768560.0 29094340.0 28170520.0 27265370.0 26279760.0 33701720.0 27242550.0 True False 34349536.670822084 29326947.39941031 31681900.585579783 30407675.593477994 31383899.03384994 27994697.335356176 30021619.68396814 26188601.646302085 27582337.19922445 27001202.201383185 1.2721484182308915 1.0861348757985296 1.1733514807706162 1.1261600637885785 1.1623148776776406 1.0367944777629974 1.111862333390112 0.969905023153396 1.0215225601255449 1.0 24.686520307464 -6.4756421340016646 0.5772932161600625 0.9846671835526465 1.1867578566413313 0.6397829167113533 0.052609496711438525 0.5423915167362205 0.38439189226908127 0.043723367082486725 0.041917704578642405 3.3447053588238936e-07 6.4756421340016646 0.20209067308868478 AAFAHFPELY(ph)DFALS(ph)NVAEVDT(ph)RES(ph)LVK ddPTM_KYSE-520_SHP099_60min_R1 1 AAFAHFPELYDFALSNVAEVDTRESLVK 28 1 H0YH15;O60306 H0YH15 AQR Intron-binding protein aquarius 4 AAFAHFPELY(1)DFALS(1)NVAEVDT(1)RES(1)LVK 48.085 0.054189 65630000.0 9367.7 17546.0 16360.0 20336.0 11864.0 14153.0 12881.0 11723.0 15985.0 12206.0 True False 8848.055006953027 16703.06382291706 17414.59177692551 22268.72732575865 12797.629303073916 14064.665877211222 14183.137186445432 11682.335649168765 13082.526949057878 12097.864336124301 0.7313733036774662 1.3806621862208857 1.4394765301612307 1.8407155764893217 1.0578420246340599 1.1625742764542366 1.17236702217717 0.9656527238683967 1.0813914411317513 1.0 13.562464767245654 AAFDDAIAELDTLSEESYK ddPTM_KYSE-520_SHP099_60min_R1 2 AAFDDAIAELDTLSEESYK 19 0 P62258;P62258-2;K7EM20 P62258 YWHAE 14-3-3 protein epsilon 0 ; 405.5 2.9345999999999992e-106 411050000.0 381340.0 479780.0 800940.0 339430.0 486520.0 495850.0 396610.0 352370.0 596270.0 514190.0 False True 360186.31001755677 456730.6486355382 852569.8739493104 371689.325146649 524806.356079865 492755.216223782 436703.20934058883 351147.7107137766 488002.39874349313 509634.67663376714 0.7067539289058097 0.896192252168416 1.6729039703120179 0.72932502866902 1.0297697157232504 0.9668792937688676 0.8568946136575628 0.6890184809110189 0.957553363454074 1.0 18.959103919428067 -6.634332316748299 3.088151910930239 0.8491358627535881 1.021626869482223 0.04798910278671542 0.26168944768264774 0.7300638199588959 13.921614788942875 0.11187961978507804 0.08296063565037759 2.3209601468056544e-07 6.634332316748299 0.17249100672863493 AAFTTPDHAPLS(ph)PQSSVASSGSEQTEEQGSSR ddPTM_KYSE-520_SHP099_60min_R1 4 AAFTTPDHAPLSPQSSVASSGSEQTEEQGSSR 32 0 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3 M0QZ22 SAMD4B Protein Smaug homolog 2 1 AAFTTPDHAPLS(0.945)PQS(0.048)S(0.006)VASSGSEQTEEQGSSR;AAFTTPDHAPLS(0.999)PQS(0.001)SVASSGSEQTEEQGSSR;AAFTTPDHAPLS(0.978)PQS(0.01)S(0.012)VASSGSEQTEEQGSSR;AAFTTPDHAPLS(0.825)PQS(0.136)S(0.027)VAS(0.01)S(0.002)GSEQTEEQGSSR 215.08 1.6128000000000001e-22 2664290000.0 590640.0 945190.0 670940.0 674166.0 543477.0 885560.0 585582.0 772840.0 1020950.0 973520.0 True False 557876.0217883507 899781.6536408849 714189.865941956 738238.5339446015 586245.5479388653 880032.8915581971 644778.3432895807 770159.1984222129 835571.2160550926 964895.3701870987 0.5781725553105052 0.9325173292793519 0.7401733783876179 0.765096980205691 0.6075742158708761 0.9120500716959121 0.6682365396411369 0.7981789758954637 0.8659708004330776 1.0 19.880012984593606 -7.99682695565986 1.8305702837028976 0.9986324537240482 0.7516614915075202 0.35162642431449276 0.10836745230572116 0.3919489251059233 2.9954728236861032 0.0967969287118192 0.02754936712145952 1.0073329600303532e-08 7.99682695565986 -0.24697096221652803 AAGARPLTS(ph)PESLSR ddPTM_KYSE-520_SHP099_60min_R1 2 AAGARPLTSPESLSR 15 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 AAGARPLT(0.013)S(0.981)PES(0.006)LSR;AAGARPLT(0.099)S(0.782)PES(0.077)LS(0.041)R 178.23 7.9416e-09 1791130000.0 1286220.0 1372540.0 1257990.0 896660.0 1004430.0 1120360.0 887170.0 972320.0 1596230.0 1197730.0 True False 1214870.8125839967 1306601.118175459 1339082.0482551656 981878.2968093414 1083472.9265750628 1113367.4176635605 976853.8015448169 968947.2488611933 1306394.8696837435 1187119.0440198383 1.0233774099606598 1.1006487721324298 1.1280099118962392 0.8271102226483471 0.9126910498429814 0.9378734367645732 0.8228777109303054 0.8162174246486108 1.1004750334557953 1.0 20.179033184679348 -5.254277978758743 24.933573877742145 0.905891426671096 1.0856757135680803 0.43631607145114626 0.08650140883495902 465.07392530431605 1619226.221471157 0.023170034317465282 0.03908147865300588 5.5682922530327474e-06 5.254277978758743 0.17978428689698434 AAGARPLTSPESLS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 AAGARPLTSPESLSR 15 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 AAGARPLT(0.007)S(0.303)PES(0.1)LS(0.59)R 115.06 0.00026027 1492500000.0 890290.0 916450.0 861070.0 568530.0 769340.0 881190.0 686580.0 709190.0 996590.0 766990.0 True False 840903.8389508846 872422.3663805057 916575.9499607116 622562.9202652224 829882.681054188 875690.1663491662 755986.2067750714 706729.9854161901 815634.3779894642 760195.0653091914 1.1061685050650347 1.1476296100733943 1.2057115229864273 0.8189515410916404 1.0916707025934889 1.1519282435660114 0.9944634492827074 0.9296692620975439 1.0729277460617614 1.0 19.536010134631344 AAGGAPS(ph)PPPPVR ddPTM_KYSE-520_SHP099_60min_R1 8 AAGGAPSPPPPVR 13 0 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR;AAGGAPS(1)PPPPVR 157.5 1.8677000000000001e-06 10973610000.0 4790640.0 5990090.0 4328900.0 3999630.0 4147690.0 5229010.0 4115850.0 5445610.0 6108870.0 5725790.0 True False 4524893.649295928 5702317.085091606 4607947.820484896 4379753.63266739 4474089.605872101 5196373.808987226 4531920.284825051 5426720.449924928 4999653.200080771 5675063.955197217 0.7973291023710906 1.0048022595180501 0.8119640336854606 0.7717540572659831 0.788376948910811 0.9156502640341865 0.7985672620789981 0.9562395230727125 0.8809862302084005 1.0 22.436205220287366 -7.929356899491415 0.8786879842130245 0.995100938982733 0.8436367446070583 0.297624137191595 0.07244127870345153 0.7829123667883657 1.3699370210318982 0.07003074394294106 0.0250923611692102 1.1766386245359159e-08 7.929356899491415 -0.1514641943756747 AAGGAPS(ph)PPPPVRR ddPTM_KYSE-520_SHP099_60min_R1 3 AAGGAPSPPPPVRR 14 1 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 AAGGAPS(1)PPPPVRR;AAGGAPS(1)PPPPVRR;AAGGAPS(1)PPPPVRR 80.411 0.0059294 3359550000.0 1892500.0 1941810.0 1733280.0 1593930.0 1670150.0 1882940.0 1741270.0 1703880.0 2456900.0 2018040.0 True False 1787519.2523947817 1848522.5328837656 1845010.0021460562 1745416.6279674708 1801581.3031463993 1871187.8730188715 1917294.5647575397 1697969.6379685823 2010788.8934088382 2000161.7356113633 0.893687355661973 0.9241865295052012 0.9224304061501887 0.8726377456840869 0.9007178125001644 0.9355182831986985 0.9585697649452859 0.8489161689964967 1.0053131492360174 1.0 20.931685232189327 -7.786701759774881 24.999131888420195 1.002656779451728 0.9094684260650351 0.6224535700990338 0.02972706217233465 169.41711849406738 167646.9049376208 0.028256544545320606 0.00730778104286542 1.6341737881909003e-08 7.786701759774881 -0.09318835338669296 AAGGGAGS(ph)S(ph)EDDAQSR ddPTM_KYSE-520_SHP099_60min_R1 2 AAGGGAGSSEDDAQSR 16 0 D6REM1;Q9H4A6 D6REM1 GOLPH3 Golgi phosphoprotein 3 2 AAGGGAGS(1)S(1)EDDAQSR;AAGGGAGS(1)S(1)EDDAQSR 176.49 5.6604e-09 46374000.0 448759.0 393652.0 425670.0 406950.0 421553.0 446882.0 409037.0 422728.0 530309.0 463780.0 True False 423865.4436911118 374740.36703630124 453109.3692960814 445626.40564602066 454726.8227915305 444092.84367553925 450386.4517764208 421261.65523345675 434018.2536019973 459671.27001538017 0.92210558140153 0.8152355639362947 0.9857247969422166 0.969445851229968 0.9892435147759306 0.9661096366990269 0.9798011778316085 0.9164411237173072 0.9441926914150528 1.0 18.810242973305034 -4.774235595394279 24.999995327786564 0.9669256408266086 0.868670563852337 0.5954268697200715 0.0330065045061659 129.7588665940558 253511.1804004983 0.008443189843793027 0.01775698539122968 1.681761494212307e-05 4.774235595394279 -0.0982550769742716 AAGGGAGS(ph)SEDDAQSR ddPTM_KYSE-520_SHP099_60min_R1 1 AAGGGAGSSEDDAQSR 16 0 D6REM1;Q9H4A6 D6REM1 GOLPH3 Golgi phosphoprotein 3 1 AAGGGAGS(0.706)S(0.294)EDDAQSR 69.22399999999999 0.045829 0.0 161270.0 176270.0 140630.0 119610.0 135420.0 166360.0 120780.0 145390.0 213820.0 162350.0 True False 152324.03161622526 167801.7246133359 149695.2348159555 130977.69843794224 146076.78356559918 165321.68553189115 132989.6210992066 144885.6760242811 174995.67796356324 160911.70530638864 0.9466311436212066 1.0428186333233378 0.9302942538016357 0.8139724713534687 0.9078070690224642 1.0274062114816667 0.8264757423705368 0.9004048260405126 1.0875260915938811 1.0 17.295909751233076 -7.755666924310886 24.99960907173711 1.043763059213556 0.9245401741771876 0.3060310941649437 0.07185201641533596 162.42040726594362 703441.2691370476 0.05407577693834222 0.019190878181721563 1.7552261303278427e-08 7.755666924310886 -0.11922288503636846 AAGISLIVPGKS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 4 AAGISLIVPGKSPTR 15 1 J3KPC5;P47736-3;F2Z357;P47736;P47736-4 J3KPC5 RAP1GAP Rap1 GTPase-activating protein 1 1 AAGISLIVPGKS(0.954)PT(0.046)R;AAGISLIVPGKS(0.813)PT(0.186)R;AAGISLIVPGKS(0.5)PT(0.5)R;AAGISLIVPGKS(0.794)PT(0.206)R 229.92 8.2337e-15 3166560000.0 4160340.0 4385850.0 3532890.0 2921380.0 3406180.0 4228390.0 3398870.0 4232900.0 5397400.0 4157100.0 True False 3929557.6467678184 4175147.1827049325 3760625.7422238574 3199027.0768550728 3674226.9874868747 4201999.049568365 3742460.9493745705 4218217.057866285 4417368.217381612 4120271.3281748616 0.9537133197751025 1.0133185050593208 0.9127131304456314 0.7764117510853664 0.8917439398619486 1.0198355192859851 0.9083044904793568 1.0237716698465122 1.0721061467906665 1.0 21.974307914238338 -7.319553586154784 5.130198014501228 1.0387600641447006 0.9246486689085046 0.3523430869599409 0.06630966207227103 0.264853984523698 14.810565915352383 0.04113809647034 0.019355602579354595 4.791223319465028e-08 7.319553586154784 -0.11411139523619596 AAGS(ph)PSPLPAPDPAPK ddPTM_KYSE-520_SHP099_60min_R1 1 AAGSPSPLPAPDPAPK 16 0 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3KRF7 J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 1 AAGS(0.838)PS(0.162)PLPAPDPAPK 125.28 9.946799999999999e-05 252610000.0 636200.0 708260.0 562780.0 509210.0 531420.0 679540.0 619280.0 673420.0 829690.0 661970.0 True False 600908.7177667428 674234.1264800669 599057.6992798368 557605.1653004304 573239.7306338117 675298.7387974355 681882.8659903685 671084.06319741 679039.2107828481 656105.4608048664 0.9158721480988561 1.0276307190812914 0.9130509271252717 0.8498712457238163 0.8737005936981525 1.0292533428528763 1.039288508822774 1.0228295651954624 1.0349543653391455 1.0 19.32356820323078 -6.276237570421334 24.436013375992246 1.027568476544562 0.9183849899394162 0.6026137479732493 0.044314166915762274 477.4037468093612 788326.4535459877 0.017401330798019164 0.01541645298456114 5.293737833911172e-07 6.276237570421334 -0.10918348660514587 AAGSPS(ph)PLPAPDPAPK ddPTM_KYSE-520_SHP099_60min_R1 1 AAGSPSPLPAPDPAPK 16 0 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3KRF7 J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 1 AAGS(0.236)PS(0.764)PLPAPDPAPK 91.307 0.0019563 311980000.0 1595700.0 1464900.0 1285300.0 1441900.0 1237500.0 1361500.0 1237000.0 1401800.0 1596800.0 1270600.0 True False 1507183.3400509125 1394524.0051402727 1368152.4945527113 1578937.7424769585 1334884.209588163 1353002.3734772184 1362048.031956602 1396937.482982578 1306861.372052274 1259343.4725118412 1.1968008513553008 1.107342067973565 1.086401386449277 1.253778478184086 1.0599842209255677 1.074371212468802 1.0815540491426932 1.1092585251554103 1.037732279221375 1.0 20.264240385747776 AAGYKVS(ph)PGRPPGSIK ddPTM_KYSE-520_SHP099_60min_R1 2 AAGYKVSPGRPPGSIK 16 2 Q7Z6I8 Q7Z6I8 C5orf24 UPF0461 protein C5orf24 1 AAGYKVS(1)PGRPPGSIK;AAGYKVS(1)PGRPPGSIK 78.08800000000001 0.0090329 445260000.0 489750.0 432640.0 412540.0 383010.0 382680.0 441680.0 406280.0 403560.0 526220.0 447600.0 True False 462582.5912075791 411855.32499412063 439132.98848733853 419411.1552438448 412794.73884864565 438923.3112871224 447350.74731069437 402160.1445516121 430671.7129266957 443634.6122275305 1.042710776972313 0.9283660779445428 0.9898528572475693 0.9453977297622079 0.930483617533729 0.9893802223484045 1.0083765670683467 0.9065121013266497 0.9707802345814568 1.0 18.759012402923382 -4.24576491489955 24.348507159595076 0.9617953544878768 1.0427108634020332 0.3465790316219972 0.032682324452987355 2360.574168703451 3666801.026939563 0.007935763343814866 0.18866736396549 5.678519024232442e-05 4.24576491489955 0.08091550891415644 AAHTEDINACTLTT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 AAHTEDINACTLTTSPR 17 0 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 AAHTEDINACTLT(0.026)T(0.487)S(0.487)PR 93.181 0.006928 1008400000.0 482710.0 592350.0 480340.0 567120.0 600680.0 713760.0 730510.0 741980.0 853440.0 709450.0 True False 455933.1140414712 563892.616864523 511303.48497117416 621018.9142891539 647950.0985983174 709305.1590841712 804357.0798905565 739406.2445594332 698476.8094716271 703164.8249437476 0.6484014812287366 0.8019351891068126 0.7271459931347929 0.8831768772546816 0.9214768367432951 1.0087324250625234 1.1439097226669497 1.0515404330963012 0.9933329778370306 1.0 19.42350337747149 -5.6475832461698685 1.0883620205795819 1.0536744835546783 0.7098248533294554 0.8597705157430738 0.05469142371749282 0.17878106880529804 0.44425000328761344 0.023183457434234802 0.03990483006508398 2.2512138595838858e-06 5.6475832461698685 -0.34384963022522286 AAHTEDINACTLTTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 AAHTEDINACTLTTSPR 17 0 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 AAHTEDINACT(0.113)LT(0.009)T(0.197)S(0.68)PR;AAHTEDINACT(0.001)LT(0.004)T(0.208)S(0.788)PR;AAHTEDINACTLTT(0.008)S(0.991)PR;AAHTEDINACTLTT(0.088)S(0.912)PR;AAHTEDINACTLTT(0.003)S(0.997)PR;AAHTEDINACTLTT(0.069)S(0.931)PR;AAHTEDINACTLT(0.002)T(0.152)S(0.846)PR 272.51 5.28e-30 5691920000.0 2228191.0 2364723.0 2456104.0 2024508.0 2252174.0 2193247.0 2255393.0 2511720.0 3311380.0 2267030.0 True False 2104588.8034413615 2251118.1575584137 2614428.393745348 2216916.631629472 2429407.2806828376 2179558.1319293315 2483390.1349544832 2503007.429559853 2710116.865096733 2246945.8779226486 0.9366441907301749 1.001856866992997 1.1635475600161964 0.9866355275450875 1.081204182331654 0.9700091815047995 1.105229173232438 1.1139598217087183 1.2061335752342626 1.0 21.0995339441344 -6.901505296007699 7.967446751166627 1.11793575276961 1.029802581933048 0.21767793352599252 0.07559209800658348 0.36133344976223225 25.737605476768028 0.031188833506862954 0.02099327370056249 1.2545694389071808e-07 6.901505296007699 -0.08813317083656202 AAHVPENS(ph)DT(ph)EQDVLTVKPVR ddPTM_KYSE-520_SHP099_60min_R1 1 AAHVPENSDTEQDVLTVKPVR 21 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 2 AAHVPENS(1)DT(1)EQDVLTVKPVR 119.32 8.113e-05 385810000.0 554640.0 511980.0 442980.0 453390.0 407780.0 458010.0 409720.0 500050.0 563020.0 491730.0 True False 523873.0135525709 487383.7123023525 471535.19959306065 496480.0492833259 439869.96604918106 455151.3896998164 451138.4960818586 498315.44326254725 460789.7605792033 487373.6547601511 1.074889888765904 1.0000206362040769 0.9675024388117881 1.018684626126655 0.9025312750350697 0.933885911260033 0.9256522006793232 1.0224505128570827 0.945454798548702 1.0 18.89466874196475 -3.5721611822769894 0.9344303781708702 0.9589511785729514 1.3666458365988992 0.4468863969526802 0.03757543949907362 6.083182867071875 1.6734880979881452 0.012642060253904927 3.418258860025701 0.00026781741737434364 3.5721611822769894 0.40769465802594773 AAHVPENS(ph)DTEQDVLTVKPVR ddPTM_KYSE-520_SHP099_60min_R1 13 AAHVPENSDTEQDVLTVKPVR 21 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 AAHVPENS(0.968)DT(0.032)EQDVLTVKPVR;AAHVPENS(0.948)DT(0.052)EQDVLTVKPVR;AAHVPENS(0.997)DT(0.003)EQDVLTVKPVR;AAHVPENS(0.947)DT(0.043)EQDVLT(0.01)VKPVR;AAHVPENS(1)DTEQDVLTVKPVR;AAHVPENS(0.999)DT(0.001)EQDVLTVKPVR;AAHVPENS(0.999)DT(0.001)EQDVLTVKPVR;AAHVPENS(0.999)DT(0.001)EQDVLTVKPVR;AAHVPENS(0.835)DT(0.161)EQDVLT(0.004)VKPVR;AAHVPENS(1)DTEQDVLTVKPVR;AAHVPENS(1)DTEQDVLTVKPVR;AAHVPENS(0.998)DT(0.002)EQDVLTVKPVR;AAHVPENS(0.999)DT(0.001)EQDVLTVKPVR 286.44 3.4693e-44 23715900000.0 13106560.0 11971830.0 11406890.0 10855170.0 12214040.0 11629990.0 11227750.0 12685930.0 14514240.0 12164380.0 True False 12379512.989520408 11396685.316716805 12142196.381069306 11886842.093074147 13175215.459618753 11557402.91848426 12362760.542280316 12641925.469748326 11878819.890215453 12056613.05694443 1.0267819769159792 0.9452642514849959 1.0070984549077473 0.9859188510845923 1.0927791575785892 0.9585944961406361 1.0253924948814335 1.0485470015533729 0.9852534732690479 1.0 23.523321346555754 AAHVPENS(ph)DTEQDVLTVKPVRK ddPTM_KYSE-520_SHP099_60min_R1 2 AAHVPENSDTEQDVLTVKPVRK 22 2 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BS99 H3BSS6 ZNF106 Zinc finger protein 106 1 AAHVPENS(1)DTEQDVLTVKPVRK;AAHVPENS(0.993)DT(0.007)EQDVLTVKPVRK 173.35 5.7375e-10 1695670000.0 969170.0 1048340.0 1172820.0 806030.0 914160.0 880460.0 672550.0 800950.0 1405720.0 765780.0 True False 915408.2081075029 997976.1728095779 1248421.853778347 882634.8488582429 986099.1911411037 874964.7225499462 740537.9174554675 798171.6913931356 1150476.6833174615 758995.7849678252 1.206078118268217 1.3148639196354475 1.6448337112060103 1.1628982220180035 1.2992156355425686 1.1527925976387827 0.9756811989237331 1.0516154466219745 1.5157879741930738 1.0 19.533732348189673 -5.835522311869927 1.739485364357927 1.1376953291924163 1.369557610177501 0.20946308890897092 0.18354123215864748 0.5534832038236772 3.4569595162655133 0.06756506295930087 0.08466323372872567 1.46041971848179e-06 5.835522311869927 0.23186228098508477 AAIDWFDGK ddPTM_KYSE-520_SHP099_60min_R1 3 AAIDWFDGK 9 0 A0A075B7D9;Q92804-2;Q92804;H3BPE7;P35637-2;P35637 A0A075B7D9;H3BPE7 TAF15;FUS TATA-binding protein-associated factor 2N;RNA-binding protein FUS 0 ;; 195.06 2.6953e-05 6373077000.0 8497560.0 8758400.0 5975860.0 4593320.0 7548240.0 8664650.0 6383310.0 6738460.0 6505500.0 7077630.0 False True 8026183.407334101 8337633.317373575 6361073.49731407 5029867.751767982 8142243.544389294 8610570.70536128 7028597.269902106 6715085.855028384 5324265.190309422 7014927.704512816 1.1441576799388435 1.1885558438485175 0.90679102697265 0.7170234624844654 1.160702417382186 1.2274639266520113 1.0019486395248944 0.9572566016194952 0.7589907429672065 1.0 22.741996804904446 -7.372598433093146 3.152299322389612 0.8768333876869279 1.0484604112905442 0.16499844342961412 0.15350057397576242 0.5126840453033432 9.538447678480969 0.10905506556465777 0.045428659375353106 4.2403486527306864e-08 7.372598433093146 0.17162702360361637 AAIELPSLEVLS(ph)DQEEDREQCGVK ddPTM_KYSE-520_SHP099_60min_R1 9 AAIELPSLEVLSDQEEDREQCGVK 24 1 Q9BQI3-2;Q9BQI3 Q9BQI3-2 EIF2AK1 Eukaryotic translation initiation factor 2-alpha kinase 1 1 AAIELPS(0.232)LEVLS(0.768)DQEEDREQCGVK;AAIELPSLEVLS(1)DQEEDREQCGVK;AAIELPSLEVLS(1)DQEEDREQCGVK;AAIELPSLEVLS(1)DQEEDREQCGVK;AAIELPSLEVLS(1)DQEEDREQCGVK;AAIELPSLEVLS(1)DQEEDREQCGVK;AAIELPSLEVLS(1)DQEEDREQCGVK;AAIELPS(0.048)LEVLS(0.952)DQEEDREQCGVK;AAIELPS(0.182)LEVLS(0.818)DQEEDREQCGVK 343.56 6.532099999999999e-73 3775822000.0 2223955.0 2102330.0 1914122.0 1717192.0 2011503.0 2121308.0 1726647.0 2050814.0 2585121.0 2007126.0 True False 2100587.7828056184 2001330.9111383357 2037509.3668234833 1880393.4113873995 2169796.8422135115 2108068.1299127494 1901193.3292108118 2043700.2048975877 2115728.191997213 1989344.4251604 1.0559196065991683 1.0060253447448997 1.02421146436681 0.9452327046060836 1.0907094894030538 1.0596798137370187 0.955688369075415 1.0273234634735535 1.0635303596694285 1.0 20.923861648136832 -4.246836247323346 22.77677451990996 1.0193765115319535 1.0559196949224892 0.060581301100057106 0.043423530455575815 2362.068273281432 3683939.7386652273 0.01086384047635394 0.19848869172914382 5.66452832350722e-05 4.246836247323346 0.03654318339053564 AAISQLRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 AAISQLRSPR 10 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 AAIS(0.007)QLRS(0.993)PR;AAIS(0.001)QLRS(0.999)PR 87.573 0.006321800000000001 444500000.0 791990.0 742420.0 770340.0 643940.0 686060.0 717410.0 646160.0 730480.0 965230.0 679080.0 True False 748056.7359070776 706753.028804861 819997.3489875785 705139.8639923799 740049.0188525693 712932.3780802722 711480.1587138866 727946.1353753145 789968.5634681974 673063.8795162458 1.1114201172773255 1.050053420357112 1.2183053851841505 1.0476566719033982 1.0995227070935198 1.0592343457692028 1.057076720897951 1.081540931744123 1.1736903249599058 1.0 19.36038390986355 AAKNS(ph)EEEEEEK ddPTM_KYSE-520_SHP099_60min_R1 16 AAKNSEEEEEEK 12 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK;AAKNS(1)EEEEEEK 252.25 4.6239e-16 80372330000.0 33971420.0 28063500.0 26056170.0 29205510.0 28806040.0 29152380.0 31570560.0 31040030.0 32484040.0 28200630.0 True False 32086957.61225317 26715287.33582774 27735792.409546047 31981192.889443237 31072911.46405257 28970429.182893734 34762020.30377351 30932359.3807275 26585757.192009628 27950794.357958116 1.147980168338844 0.9557970694389728 0.992307841213434 1.1441962070869585 1.111700478566382 1.0364796367458269 1.2436863102560127 1.1066719244034822 0.9511628489528121 1.0 24.73638594906898 -3.9282144183477103 20.15541537396801 1.069553703931208 3.3426807888352164 0.07314168462052018 0.08826283601710437 1195.4643365800623 346461.15715036716 0.02201363865780921 3920.362861718896 0.00011797380357205513 3.9282144183477103 2.2731270849040084 AAKNS(ph)EEEEEEKK ddPTM_KYSE-520_SHP099_60min_R1 4 AAKNSEEEEEEKK 13 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AAKNS(1)EEEEEEKK;AAKNS(1)EEEEEEKK;AAKNS(1)EEEEEEKK;AAKNS(1)EEEEEEKK 176.85 2.5304e-07 3263310000.0 2953850.0 2748870.0 2726620.0 2771320.0 2716680.0 2869550.0 2766810.0 2906520.0 3445810.0 2698980.0 True False 2789994.0521460106 2616810.1590620107 2902382.2879462526 3034705.419572259 2930467.260205229 2851640.074044471 3046506.1562634213 2896437.9605068667 2820137.765801262 2675069.1369746677 1.0429614747457763 0.9782215057145984 1.0849746826463937 1.1344399954478623 1.0954734663491352 1.066006120974314 1.1388513717850393 1.0827525615964277 1.0542298615095451 1.0 21.351144747672183 -4.780457765946392 22.879301340554996 1.0888467631956664 1.0105915947587678 0.32292078987239603 0.040477961755452166 76.73259884218976 92310.73093209381 0.010117715909514333 0.0211390143247502 1.6578385496680787e-05 4.780457765946392 -0.07825516843689861 AAKNS(ph)EEEEEEKKK ddPTM_KYSE-520_SHP099_60min_R1 11 AAKNSEEEEEEKKK 14 3 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK;AAKNS(1)EEEEEEKKK 183.6 8.1064e-11 350362300000.0 32092240.0 27815193.0 29421809.0 26566774.0 26211260.0 27375496.0 24462304.0 26575089.0 34871760.0 22728914.0 True False 30312019.472905662 26478909.376824103 31318385.88469881 29091672.213368107 28273937.04033116 27204635.37503933 26935192.4174003 26482906.218931388 28539927.429532576 22527553.50478749 1.3455531008488713 1.1754010204080476 1.3902257907430169 1.2913817830766945 1.2550824497796649 1.207616058674897 1.1956554630610958 1.1755784405662744 1.2668897855893386 1.0 24.425187309424544 -13.999999999868814 0.1312543553175644 0.13155062274475096 1.3586514536682213 0.6463102135476566 0.061028851608204114 90.26351068932915 0.7437193572503324 20.4880713395941 0.4508700593127543 1.0000000003020664e-14 13.999999999868814 1.2271008309234703 AAKPGPAEAPS(ph)PT(ph)ASPSGDASPPATAPYDPR ddPTM_KYSE-520_SHP099_60min_R1 1 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 AAKPGPAEAPS(0.859)PT(0.58)AS(0.492)PS(0.009)GDAS(0.055)PPAT(0.003)APY(0.001)DPR 68.092 0.021379 2563500000.0 525000.0 370420.0 379810.0 389190.0 425970.0 396240.0 404730.0 440290.0 524070.0 499960.0 True False 495877.2034384466 352624.46718824474 404293.16031748673 426178.5005857594 459491.4155622386 393766.91918223526 445644.0581841516 438762.7367544583 428912.09872960695 495530.74336299446 1.0006991696884453 0.7116096668293583 0.8158790665008794 0.8600445205345575 0.9272712575688654 0.794636709137109 0.8993267605551992 0.8854399906183994 0.8655610261812012 1.0 18.918615041276297 -10.423611165106667 0.2803739210470762 1.1098867237702856 0.8393116008996423 0.23651854363258906 0.07404436329336102 28.357454897194156 1.5839778754495055 2.3187185008810665 0.09107072366041355 3.7704122250373785e-11 10.423611165106667 -0.27057512287064334 AAKPGPAEAPS(ph)PTAS(ph)PSGDAS(ph)PPATAPYDPR ddPTM_KYSE-520_SHP099_60min_R1 2 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 3 AAKPGPAEAPS(0.995)PT(0.05)AS(0.91)PS(0.051)GDAS(0.992)PPAT(0.002)APYDPR;AAKPGPAEAPS(0.985)PT(0.017)AS(0.96)PS(0.039)GDAS(0.999)PPATAPYDPR 127.2 0.00067849 1956570000.0 498530.0 478290.0 398500.0 376570.0 458530.0 419520.0 412800.0 420920.0 559730.0 436860.0 True False 470875.5471050829 455312.23047207395 424187.9476225439 412359.0995801007 494613.7023211797 416901.62006695743 454529.85253976163 419459.92676346604 458097.14164505247 432989.76027193666 1.0874981126790442 1.0515542681335415 0.9796720073845053 0.9523530055794414 1.1423219385385477 0.9628440631139287 1.0497473479610624 0.9687525323925137 1.057986085761814 1.0 18.72397338165307 -4.537068732198844 6.120912214929107 1.0147929722651248 1.0795243500618197 0.1559332749437372 0.05439919640401174 0.24231955787807216 35.06461099304099 0.013311208939032594 0.03955424514708072 2.9035630951626994e-05 4.537068732198844 0.06473137779669491 AAKPGPAEAPS(ph)PTASPSGDAS(ph)PPATAPYDPR ddPTM_KYSE-520_SHP099_60min_R1 7 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 AAKPGPAEAPS(0.896)PT(0.103)AS(0.001)PS(0.059)GDAS(0.88)PPAT(0.059)APY(0.001)DPR;AAKPGPAEAPS(0.831)PT(0.167)AS(0.188)PS(0.158)GDAS(0.519)PPAT(0.131)APY(0.006)DPR;AAKPGPAEAPS(0.985)PT(0.124)AS(0.183)PS(0.026)GDAS(0.677)PPAT(0.006)APYDPR;AAKPGPAEAPS(0.842)PT(0.156)AS(0.003)PS(0.053)GDAS(0.826)PPAT(0.118)APY(0.001)DPR;AAKPGPAEAPS(0.946)PT(0.044)AS(0.014)PS(0.048)GDAS(0.918)PPAT(0.029)APY(0.001)DPR;AAKPGPAEAPS(0.881)PT(0.115)AS(0.019)PS(0.145)GDAS(0.839)PPAT(0.001)APYDPR;AAKPGPAEAPS(0.975)PT(0.024)ASPS(0.001)GDAS(0.995)PPAT(0.005)APYDPR 133.82 4.1371e-06 11756860000.0 2719012.0 2388422.0 2369696.0 2183352.0 2350321.0 2274376.0 2119897.0 2325318.0 2869311.0 2301313.0 True False 2568182.9841439594 2273678.6220254893 2522450.3958076597 2390857.1176312845 2535277.891202797 2260180.7757470594 2334196.8769609607 2317252.0145913013 2348316.4518441153 2280925.157214419 1.1259391725418795 0.9968229842325123 1.105889155472424 1.04819621550017 1.111512967965598 0.9909052774477293 1.0233553124608437 1.0159263697285212 1.0295455966262383 1.0 21.12118767836482 -6.2708115673980025 24.986997080925 1.0136549590169217 1.0731105473577134 0.4541754614673985 0.03582783764527393 657.8984180026104 1754002.5021265675 0.011726752173375932 0.010488595885857476 5.360291805326276e-07 6.2708115673980025 0.059455588340791676 AAKPGPAEAPS(ph)PTASPSGDASPPATAPYDPR ddPTM_KYSE-520_SHP099_60min_R1 3 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AAKPGPAEAPS(0.781)PT(0.205)AS(0.014)PSGDASPPATAPYDPR;AAKPGPAEAPS(0.992)PT(0.008)ASPSGDASPPATAPYDPR;AAKPGPAEAPS(0.989)PT(0.009)AS(0.002)PSGDASPPATAPYDPR 163.43 3.4871e-10 19812300000.0 1060600.0 1287330.0 829600.0 718880.0 750920.0 1079070.0 884150.0 1095070.0 1193430.0 1213240.0 True False 1001766.403746316 1225484.7344782767 883077.3434069323 787202.1390608464 810013.1318496515 1072335.1238693062 973528.5104724586 1091271.457761259 976733.1959220599 1202491.637486438 0.8330755678603329 1.0191212115536212 0.7343729601752776 0.6546425060438099 0.6736122785376019 0.8917609823140248 0.8095927490251992 0.9075085628390215 0.8122577866435065 1.0 20.1975954303891 -10.204106174018065 7.354032968520295 1.0000002568281505 0.8146601489879467 0.22061876636098843 0.10425279401464423 4.827262145412856e-07 5.22159103704285e-08 0.10965788071130604 0.02659590558398045 6.25019872543234e-11 10.204106174018065 -0.18534010784020383 AAKPGPAEAPSPT(ph)ASPSGDASPPATAPYDPR ddPTM_KYSE-520_SHP099_60min_R1 1 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AAKPGPAEAPS(0.393)PT(0.516)AS(0.088)PS(0.004)GDASPPATAPYDPR 125.36 0.00035293 4307000000.0 167700.0 257880.0 179420.0 146600.0 182890.0 199750.0 187280.0 224830.0 277400.0 234120.0 True False 158397.3466983382 245491.05771422875 190985.70028215024 160532.81992310297 197282.402498246 198503.28615649967 206212.09007666347 224050.11720571647 227031.15268493321 232045.87894260403 0.6826121947096392 1.0579418985283955 0.8230514635831566 0.6918150007861608 0.8501870552376554 0.8554484443380224 0.8886694778478247 0.9655423239002434 0.9783890742618566 1.0 17.82405055038981 -7.1247678827968945 1.4567456850991933 0.9933682894449425 0.8289409861121082 0.3432900667114738 0.09664995702781119 0.5448719614184547 2.1431796502551417 0.07367793793905565 0.03147950328413406 7.502951121249689e-08 7.1247678827968945 -0.16442730333283428 AAKPGPAEAPSPTASPSGDAS(ph)PPATAPYDPR ddPTM_KYSE-520_SHP099_60min_R1 2 AAKPGPAEAPSPTASPSGDASPPATAPYDPR 31 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 AAKPGPAEAPSPTASPS(0.004)GDAS(0.991)PPAT(0.006)APYDPR;AAKPGPAEAPSPTASPS(0.003)GDAS(0.981)PPAT(0.015)APYDPR 169.01 2.5018e-10 2417900000.0 1130920.0 1267670.0 946090.0 799950.0 831150.0 1258110.0 846650.0 1156400.0 1285510.0 1253920.0 True False 1068185.6131668726 1206769.230388537 1007076.4751975227 875977.0074862622 896556.7764033952 1250257.6688177926 932237.6445077264 1152388.7183057885 1052093.789069966 1242811.2443349995 0.8594914296405766 0.9709996074538675 0.8103213418674746 0.7048351159350654 0.7213941622189963 1.0059915972893998 0.7501039669194062 0.9272435565405638 0.8465435068001158 1.0 20.245175768739305 -8.544081044211952 0.6883970742217359 1.0022165571535 0.8331456178277558 0.19823191961257292 0.09634323377390844 3.212061556149042 2.491977612041627 0.12010367816861639 0.03812193427913699 2.857057334743686e-09 8.544081044211952 -0.16907093932574424 AAKPT(ph)TTPEVK ddPTM_KYSE-520_SHP099_60min_R1 1 AAKPTTTPEVK 11 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAKPT(0.525)T(0.314)T(0.161)PEVK 79.82 0.034847 456710000.0 1349000.0 1450000.0 1063400.0 973900.0 901020.0 1487200.0 1068100.0 1372600.0 1554700.0 1448800.0 True False 1274168.2808351712 1380339.8235056289 1131948.4655001594 1066459.1631862887 971925.1478974771 1477917.8331511694 1176073.9716514524 1367838.7709672495 1272405.6707976395 1435964.7591493444 0.8873255925792912 0.9612630217494562 0.7882842933908196 0.742677810434604 0.6768447078556711 1.0292159495799031 0.8190131158567919 0.9525573397619784 0.8860981181400328 1.0 20.453588912897157 -6.2727851044294125 24.99500813580481 0.9270139923209593 0.8145228506534248 0.3248255280333573 0.0902226886129689 1110.7539154002054 2447020.6299455403 0.03369179602924552 0.029975372445633138 5.335988630760907e-07 6.2727851044294125 -0.11249114166753449 AAKPTTT(ph)PEVK ddPTM_KYSE-520_SHP099_60min_R1 4 AAKPTTTPEVK 11 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AAKPT(0.058)T(0.058)T(0.883)PEVK;AAKPT(0.236)T(0.195)T(0.568)PEVK;AAKPT(0.299)T(0.299)T(0.402)PEVK;AAKPT(0.303)T(0.171)T(0.526)PEVK 117.2 0.00081234 7785230000.0 8979450.0 9690410.0 7474940.0 5908860.0 6240200.0 8799070.0 6512660.0 8291300.0 9769790.0 8889310.0 True False 8481342.008410199 9224868.15799804 7956786.592726864 6470436.277836458 6731268.23811883 8744151.7402807 7171023.2302364595 8262539.415503959 7995842.412363845 8810557.629178537 0.9626339631809396 1.0470243253897349 0.9030968217466531 0.7343957726816136 0.7640002507703282 0.9924629187285586 0.8139125276801644 0.9377998264423505 0.9075296648515705 1.0 23.070801901000117 -4.895088156305366 5.830673353405203 0.869418008506342 1.002876497018224 0.24424857568427405 0.0862883983039686 0.2614740740546862 12.515950837382027 0.023083589494676007 0.049369003369370494 1.2732446021791043e-05 4.895088156305366 0.13345848851188202 AALAHSEEVTASQVAATK ddPTM_KYSE-520_SHP099_60min_R1 2 AALAHSEEVTASQVAATK 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 227.4 1.5271000000000001e-18 1655690000.0 1236870.0 1095920.0 537190.0 1408630.0 1060330.0 998110.0 1029170.0 1163680.0 819070.0 747280.0 False True 1168258.3554607844 1043270.3581905423 571818.1269343892 1542505.7716799476 1143771.9385475696 991880.4252598954 1133208.5473312663 1159643.4656849543 670347.5350744349 740659.6805750425 1.5773213880817132 1.4085691250002366 0.7720389565291769 2.082610694404693 1.544261107421905 1.3391851227675942 1.5299989685565871 1.565690014048849 0.9050682150727879 1.0 19.498451277525422 -7.764598886372918 24.99940102268343 0.9525338217402619 1.4711896879829982 0.3244057176823113 0.3029013569852537 101.764708435651 805140.0533187204 0.2546308270322193 0.0765485282049642 1.719495777294456e-08 7.764598886372918 0.5186558662427363 AALAPAKES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 15 AALAPAKESPR 11 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR;AALAPAKES(1)PR 189.8 1.3069e-06 553242200000.0 258919300.0 230026800.0 219854800.0 199671000.0 213765300.0 210115100.0 200371700.0 206366900.0 245174700.0 203516200.0 True False 244556530.28617153 218975967.25073394 234026992.1881173 218647671.806725 230587412.95181972 208803693.72266126 220627226.87534246 205651061.39029652 200657154.83122787 201713204.80120757 1.2123972276737505 1.0855807256968584 1.1601966882572492 1.083953189986777 1.1431448584591586 1.0351513374071941 1.0937669008470468 1.019522056540472 0.994764596740107 1.0 27.587730289641993 -6.378539542606113 0.41878119148953113 0.9848619130739633 1.1742379595915455 0.688580086100709 0.03843546242895811 0.743601704490865 0.2786160797251421 0.03733405354363228 0.054302824574616014 4.182736030160294e-07 6.378539542606113 0.18937604651758222 AALAPAKES(ph)PRK ddPTM_KYSE-520_SHP099_60min_R1 4 AALAPAKESPRK 12 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AALAPAKES(1)PRK;AALAPAKES(1)PRK;AALAPAKES(1)PRK;AALAPAKES(1)PRK 130.72 4.0976e-05 13945620000.0 11290100.0 9786240.0 9686830.0 8645460.0 9159100.0 9494420.0 8749080.0 8753250.0 12006000.0 9251270.0 True False 10663815.64674364 9316094.340954278 10311258.561276013 9467121.919047676 9879869.061849663 9435161.80300372 9633522.3891923 8722887.018773908 9826013.046630532 9169310.945179138 1.1629898593798103 1.016008116275336 1.1245401778742454 1.032479100736039 1.0774930767337656 1.028993548088186 1.0506266443344061 0.9513132525361742 1.071619569385054 1.0 23.128381891658773 -1.0000000000004254 0.2320412492551953 1.0003778854560408 1.7030175908717422 0.3875876148414109 0.0454048423955347 52.400840785320284 0.6885702810599393 0.06126056595622656 14.029195617124174 0.09999999999990204 1.0000000000004254 0.7026397054157014 AALDGGVASAAS(ph)PESKPS(ph)PGTK ddPTM_KYSE-520_SHP099_60min_R1 4 AALDGGVASAASPESKPSPGTK 22 1 A0A0J9YWL0;Q9Y4K1;A0A494C1M5 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 2 AALDGGVASAAS(1)PES(0.004)KPS(0.995)PGTK;AALDGGVASAAS(1)PES(0.009)KPS(0.991)PGTK;AALDGGVASAAS(1)PES(0.013)KPS(0.987)PGTK;AALDGGVAS(0.003)AAS(0.997)PES(0.009)KPS(0.977)PGT(0.014)K 210.79 1.6414999999999998e-19 5372570000.0 6384840.0 5654320.0 5382420.0 5181950.0 5709020.0 5350080.0 5193120.0 5347400.0 6559300.0 5388480.0 True False 6030660.197337005 5382677.979892649 5729379.405376493 5674440.969989924 6158287.394119605 5316688.166208594 5718091.249567076 5328851.117492548 5368296.466497044 5340742.259374007 1.1291801596963535 1.0078520397506614 1.0727683769648975 1.0624817102960198 1.1530770621463062 0.9954961142108678 1.07065478389839 0.99777350388692 1.0051592467460257 1.0 22.348608831742723 -6.996320230978672 1.2653407580189033 0.998667403780778 1.0749766150844058 0.3396114471819002 0.044493612433197924 0.5710219833673069 1.7341102300358067 0.03222239955128775 0.015043209492464963 1.0085089785965076e-07 6.996320230978672 0.07630921130362778 AALDGGVASAAS(ph)PESKPSPGTK ddPTM_KYSE-520_SHP099_60min_R1 4 AALDGGVASAASPESKPSPGTK 22 1 A0A0J9YWL0;Q9Y4K1;A0A494C1M5 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 AALDGGVASAAS(1)PESKPSPGTK;AALDGGVASAAS(1)PESKPSPGTK;AALDGGVASAAS(0.999)PES(0.001)KPSPGTK;AALDGGVASAAS(1)PESKPSPGTK 303.15 1.7142e-45 14706400000.0 9614100.0 11054600.0 7970500.0 6879400.0 7163100.0 10233800.0 7497500.0 10328100.0 11653200.0 10571700.0 True False 9080786.707766794 10523520.422707109 8484291.183250897 7533216.107632973 7726795.217536134 10169927.058164632 8255420.468548616 10292274.23169665 9537272.633266276 10478042.962658139 0.8666491195091569 1.0043402627963107 0.809720976854875 0.7189525882342724 0.7374273273237228 0.9705941361768055 0.7878780892547826 0.9822706652737029 0.9102150723427457 1.0 23.32086594676222 -7.2716671703868965 24.699306711020697 0.959682160893733 0.8433739532079791 0.28506462067922445 0.08839530858672559 924.9614371292168 2233694.200671532 0.0508894814703192 0.024892080066226698 5.349741897067132e-08 7.2716671703868965 -0.1163082076857539 AALGLQDS(ph)DDEDAAVDIDEQIESMFNSK ddPTM_KYSE-520_SHP099_60min_R1 17 AALGLQDSDDEDAAVDIDEQIESMFNSK 28 0 A0A0C4DG89;Q7L014 A0A0C4DG89 DDX46 Probable ATP-dependent RNA helicase DDX46 1 AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK;AALGLQDS(1)DDEDAAVDIDEQIESMFNSK 188.53 2.9771e-15 26283508000.0 1013619.0 1155320.0 974162.6 812096.0 830967.6000000001 1034066.0 821726.2 990342.0 1324899.0 1113245.0 True False 957391.5334706191 1099816.6930293243 1036958.6799112692 889277.3596744346 896360.0225611092 1027612.0105266938 904794.3035708802 986906.7347495614 1084330.739585852 1103382.515391503 0.8676877874314664 0.9967682808885969 0.9397998114401285 0.8059556384749315 0.8123746842617513 0.9313288874820314 0.8200187069756497 0.8944375327529877 0.9827332991597288 1.0 20.073501593608352 -7.772592651302572 4.25074978745799 0.9974380347618291 0.8830776866457156 0.3588998615021418 0.05801962659409319 0.24030411706163557 9.56261271740194 0.05561602421037803 0.015964282795807003 1.6881356784090027e-08 7.772592651302572 -0.11436034811611351 AALHS(ph)PVSEGAPVIPPSSGLPLPTPDAR ddPTM_KYSE-520_SHP099_60min_R1 3 AALHSPVSEGAPVIPPSSGLPLPTPDAR 28 0 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5;Q9NRA0-3 E9PCV4 SPHK2 Sphingosine kinase 2 1 AALHS(0.859)PVS(0.141)EGAPVIPPSSGLPLPTPDAR;AALHS(0.881)PVS(0.119)EGAPVIPPSSGLPLPTPDAR;AALHS(0.926)PVS(0.074)EGAPVIPPSSGLPLPTPDAR 131.03 4.0461e-05 2020200000.0 265529.0 479576.0 367950.0 397657.0 318556.0 477330.0 351455.0 447920.0 502440.0 558310.0 True False 250799.57705106138 456536.4491017485 391668.64574081596 435450.20172006387 343624.5448642965 474350.80641342717 386983.5012702573 446366.2700653135 411209.5614816791 553363.8077586079 0.45322728652407074 0.825020434478617 0.7077959206028746 0.7869148571241922 0.6209740139242983 0.8572132831288303 0.6993292583368044 0.8066416050469828 0.7431088837328872 1.0 19.07786876335278 -13.999999999999593 0.08944472449427036 1.8360803098372087 0.5131302947465102 0.4559865520423847 0.10254957273142382 204.82803875972928 1.272010397620351 33.079507705025925 2.3517954000692027 1.0000000000009367e-14 13.999999999999593 -1.3229500150906985 AALLKAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 AALLKASPK 9 1 P50914 P50914 RPL14 60S ribosomal protein L14 1 AALLKAS(1)PK;AALLKAS(1)PK;AALLKAS(1)PK;AALLKAS(1)PK;AALLKAS(1)PK 130.56 0.00089167 88994860000.0 26968350.0 24913530.0 23675080.0 17080770.0 17897710.0 20020830.0 17928830.0 17639680.0 23809960.0 18649680.0 True False 25472361.86542714 23716646.622829057 25201213.53826733 18704121.24527924 19306157.952960126 19895872.57362021 19741251.104918756 17578492.067212246 19486671.464247134 18484458.3444315 1.3780421038467034 1.2830587827299667 1.3633731142497487 1.0118836536486293 1.0444535400073633 1.0763568075887873 1.0679918630596967 0.9509876751410365 1.0542192311584586 1.0 24.139809432635158 -5.262359059833826 24.99999707391492 1.0315611679923569 1.3356480918712363 0.9222941818949798 0.0414974920685154 20.382880444319394 554080.634188665 0.011534598522588424 0.018287626607606296 5.465638956949908e-06 5.262359059833826 0.3040869238788795 AALPSLTNPPSLS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 3 AALPSLTNPPSLSPIR 16 0 P42858 P42858 HTT Huntingtin 1 AALPSLTNPPS(0.197)LS(0.803)PIR;AALPSLTNPPS(0.278)LS(0.722)PIR;AALPSLT(0.077)NPPS(0.153)LS(0.77)PIR 97.579 0.0013640999999999998 472351000.0 305155.0 299428.0 277071.0 252095.0 229129.0 263883.0 237728.0 282322.0 325374.0 295231.0 True False 288227.443838589 285043.0294294089 294931.4399892742 276054.03300487454 247160.1487343245 262236.00831457146 261759.86624169687 281342.6908764505 266294.2836110577 292615.48302624235 0.9850040772201387 0.9741214869475846 1.0079146767596852 0.9434020037146068 0.8446584786908171 0.8961795377418685 0.8945523440337629 0.9614757495631874 0.9100485075397595 1.0 18.15864658258104 -5.517836662988358 24.97217591112859 0.91186417977328 0.9855465827129593 0.38313210843627665 0.039907392794796465 210.15402874816405 1040843.3305414075 0.011610260575574799 0.01543660174990847 3.0350324372815584e-06 5.517836662988358 0.0736824029396792 AALPSLTNPPSLS(ph)PIRR ddPTM_KYSE-520_SHP099_60min_R1 2 AALPSLTNPPSLSPIRR 17 1 P42858 P42858 HTT Huntingtin 1 AALPSLTNPPS(0.286)LS(0.714)PIRR;AALPSLTNPPS(0.138)LS(0.862)PIRR 154.75 1.6550999999999998e-06 691440000.0 310670.0 293460.0 260775.0 203767.0 249659.0 267939.0 198331.0 245511.0 289070.0 252044.0 True False 293436.51579470874 279361.7411075599 277584.9737547526 223132.95441521745 269305.7429346034 266266.6933140744 218380.23300403013 244659.37964369796 236582.17486169268 249811.08624726505 1.1746336810059057 1.1182920073893172 1.1111795634241657 0.8932067738353239 1.0780375962500015 1.0658722049289737 0.8741815116558742 0.9793775901583972 0.9470443382465489 1.0 17.930477977479757 -4.393155057415845 0.6346174231025961 0.9662165227265225 1.3007803645089009 0.5209589565184468 0.06634924409606514 2.425800940784698 0.8318928062040927 0.033137475452915635 0.5780917278808083 4.0443147057895225e-05 4.393155057415845 0.3345638417823784 AALQELLSK ddPTM_KYSE-520_SHP099_60min_R1 1 AALQELLSK 9 0 P62851 P62851 RPS25 40S ribosomal protein S25 0 114.51 0.0072082 0.0 146600.0 171240.0 133830.0 104970.0 186870.0 173480.0 132190.0 156550.0 174630.0 145730.0 False True 138467.80576014542 163013.37336351984 142456.89593557114 114946.31723961882 201575.60585514337 172397.2469708615 145553.0552500755 156006.9645890448 142921.59406405874 144438.94557622427 0.958659765949844 1.128597087947401 0.9862775954729803 0.7958124921298223 1.3955765534771685 1.193564840030509 1.0077133606134177 1.0800893344012663 0.989494858840791 1.0 17.140100268006144 -3.2762029996891218 13.680482800400467 1.0609719690730932 0.8195804682566564 0.0 0.1524792936531924 34204375.318964146 0.0 0.03666863291935223 0.0 0.0005294159243081218 3.2762029996891218 -0.2413915008164368 AALS(ph)SSELLELGDSLMR ddPTM_KYSE-520_SHP099_60min_R1 3 AALSSSELLELGDSLMR 17 0 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 AALS(0.814)S(0.161)S(0.025)ELLELGDSLMR;AALS(0.981)S(0.018)SELLELGDSLMR;AALS(0.981)S(0.019)SELLELGDSLMR 213.49 5.639299999999999e-18 185533000.0 128882.0 197196.0 130102.0 102763.0 132240.0 174171.0 108369.3 169753.0 223481.0 156028.0 True False 121732.65854010273 187722.40816276928 138488.58309055993 112529.56462317755 142646.53565732436 173083.93418354794 119324.32642644686 169164.1664636482 182902.4838975542 154645.71330794715 0.7871712441048759 1.2138869170525035 0.8955216418756243 0.7276604195235375 0.9224085983765438 1.119228787408317 0.7715980215296071 1.0938820277985355 1.1827193912148029 1.0 17.23860731772445 -7.430626450793731 11.927034095999248 1.1069779598464573 0.9304727430483741 0.21668862613465067 0.14877158985553424 1.1703198774301153 147.20953961178023 0.08118884146137104 0.03896698564414499 3.70999692117661e-08 7.430626450793731 -0.17650521679808318 AALSEEELEKK ddPTM_KYSE-520_SHP099_60min_R1 1 AALSEEELEKK 11 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 126.1 0.00044547 266010000.0 249390.0 318760.0 184910.0 236960.0 356550.0 398720.0 306390.0 390510.0 407030.0 355590.0 False True 235555.83955336045 303446.2911314854 196829.5944664605 259480.60715537798 384608.45650800806 396231.4405823256 337362.89127824036 389155.41195571946 333123.6123913062 352439.7492448335 0.6683577549299755 0.8609877057899245 0.5584772855167552 0.7362410389615887 1.0912743449968454 1.1242529863085076 0.9572214598412976 1.1041757145428572 0.945193080817599 1.0 18.427017119479608 -5.728310729895612 7.191787410764173 1.042656486853817 0.7046923556496888 0.768175349391047 0.08908079278570194 0.08804217034703093 14.174040147528343 0.025807314055206566 0.03284256533737726 1.8693441796192977e-06 5.728310729895612 -0.33796413120412827 AALSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 AALSSPR 7 0 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 AALS(0.003)S(0.997)PR;AALS(0.01)S(0.99)PR;AALS(0.114)S(0.886)PR 132.38 0.0019466999999999998 3519550000.0 7231000.0 6695700.0 6444400.0 5528390.0 6063400.0 6410600.0 5851450.0 5768600.0 7160200.0 6405500.0 True False 6829882.01535888 6374028.521549401 6859816.335404565 6053806.523428936 6540555.083973236 6370589.067508675 6442971.670648725 5748590.073001369 5860088.17395335 6348752.253403586 1.0757833575404299 1.0039812969756796 1.080498350164317 0.9535427249005457 1.0302111065157447 1.00343954421806 1.0148406196185442 0.9054676956278348 0.9230299025783748 1.0 22.598041650231394 -7.199962849517351 7.185079803843664 0.9358556345307324 1.0217512953884387 0.441072332144395 0.041216759001801426 0.2169614394534033 22.09388975663106 0.018788997927310702 0.010748533193357652 6.310113202350177e-08 7.199962849517351 0.08589566085770628 AAMYDIIS(ph)SPSKDSTK ddPTM_KYSE-520_SHP099_60min_R1 1 AAMYDIISSPSKDSTK 16 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 AAMYDIIS(0.5)S(0.5)PSKDSTK 87.088 0.0042525 1287700000.0 2609900.0 2626100.0 2071500.0 1918900.0 2169300.0 2451100.0 1999400.0 2356000.0 2810900.0 2414000.0 True False 2465123.644293336 2499938.2141435356 2205032.2045171894 2101271.679061677 2340011.568371397 2435801.775710619 2201518.8642635657 2347827.585894533 2300511.4170226324 2392613.838063582 1.0303056870591532 1.0448565390588958 0.9215997038209023 0.8782326866262308 0.9780147264655304 1.0180505257304666 0.9201312929149171 0.9812814540079331 0.9615055218791634 1.0 21.190156137589373 -4.74978815445616 24.999509535993575 0.9554342292129792 1.0375811614326107 0.3972952803472777 0.039469921293810675 223.9395649437386 480488.4126900905 0.010553403621208306 0.027425012191063473 1.779147052802243e-05 4.74978815445616 0.08214693221963154 AAMYDIISS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 7 AAMYDIISSPSK 12 0 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 AAMYDIIS(0.191)S(0.808)PS(0.002)K;AAMYDIIS(0.068)S(0.931)PSK;AAMYDIIS(0.016)S(0.984)PSK;AAMYDIIS(0.011)S(0.986)PS(0.004)K;AAMYDIIS(0.013)S(0.986)PS(0.001)K;AAMYDIISS(0.998)PS(0.002)K;AAMYDIIS(0.205)S(0.795)PSK 254.4 3.7449e-16 2997360000.0 7908610.0 8724400.0 6171100.0 6602010.0 7087650.0 9224200.0 7854080.0 9184030.0 8630440.0 9331890.0 True False 7469903.637876826 8305266.728408617 6568898.9801091105 7229463.045433311 7645407.731787913 9166628.346256744 8648047.054834044 9152172.743498718 7063369.651687651 9249216.714700552 0.8076255393610018 0.8979427106739064 0.7102113814317499 0.7816297604901962 0.8266005617142075 0.9910707716132824 0.9350031815222776 0.9895078714019542 0.7636721972857711 1.0 23.140899763097394 -6.122703714481888 5.483496744179965 0.9346286996734401 0.8005545492957791 0.42866151184283463 0.07606419473672878 0.23077996890116967 9.403300164490053 0.025029038888668104 0.025133975080914722 7.538696952942943e-07 6.122703714481888 -0.13407415037766102 AAMYDIISS(ph)PSKDSTK ddPTM_KYSE-520_SHP099_60min_R1 3 AAMYDIISSPSKDSTK 16 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 AAMYDIIS(0.144)S(0.851)PS(0.004)KDSTK;AAMYDIIS(0.019)S(0.981)PSKDSTK;AAMYDIIS(0.011)S(0.981)PS(0.008)KDSTK 168.5 6.7286e-08 2054080000.0 4338770.0 4165040.0 3406680.0 2902700.0 3375340.0 4175630.0 3087740.0 3600310.0 4339730.0 4069030.0 True False 4098089.778976434 3964945.2265475034 3626280.043680725 3178571.7352714227 3640960.054942472 4149568.3442987013 3399878.892638385 3587821.364928672 3551744.427690641 4032981.559857441 1.0161439416849936 0.9831300162670858 0.8991561180877078 0.7881443760887862 0.902796107768758 1.0289083356099902 0.8430187051880705 0.889620076779001 0.88067460140239 1.0 21.94341537859808 -4.688512876013639 4.040544597948588 0.8980055902879871 1.0076720268388426 0.254636408356019 0.06569487651818573 0.2803613745250094 8.70215178646799 0.017434311519192155 0.05031557033701984 2.0487413077349424e-05 4.688512876013639 0.1096664365508555 AAMYDIISSPS(ph)KDSTK ddPTM_KYSE-520_SHP099_60min_R1 1 AAMYDIISSPSKDSTK 16 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 AAMYDIIS(0.004)S(0.159)PS(0.531)KDS(0.23)T(0.076)K 174.4 4.021499999999999e-08 1023600000.0 1543600.0 1678600.0 1128700.0 1087200.0 1088000.0 1376100.0 1244100.0 1276100.0 1593400.0 1343400.0 True False 1457973.4309096893 1597957.536370034 1201457.8079838539 1190527.1611214008 1173619.4101268067 1367511.249461622 1369865.7692459244 1271673.506943979 1304078.726345251 1331498.521149384 1.0949868946539487 1.200119647891637 0.9023350675198079 0.8941257855049713 0.8814274980295945 1.0270467655353839 1.0288150887793857 0.955069409950405 0.9794068154274302 1.0 20.34461939552074 -4.7610885370685105 24.99999990071618 0.9568272738023986 1.14755330289418 0.6512469220087385 0.0553193711316962 5.579743499609624 397443.4246458397 0.01551241495164576 0.03621808691066882 1.733450573329891e-05 4.7610885370685105 0.19072602909178138 AANFENHSGK ddPTM_KYSE-520_SHP099_60min_R1 1 AANFENHSGK 10 0 P18206-2;P18206 P18206-2 VCL Vinculin 0 87.29799999999999 0.0028355999999999998 0.0 787810.0 792500.0 691370.0 826020.0 824820.0 819270.0 902120.0 1052200.0 852460.0 852430.0 False True 744108.6088396994 754427.110433249 735936.8164311122 904524.6924480301 889728.6414161678 814156.6320372245 993315.0934427561 1048550.1637853257 697674.752767838 844878.1333805053 0.8807289234275607 0.8929419292870726 0.8710567682542573 1.0705978255454056 1.0530851802924617 0.9636379495107079 1.1756903797099454 1.2410667554974977 0.8257696881990769 1.0 19.6883837341192 -5.261508324998369 24.99914733773559 1.0592926534597424 0.8827124711753361 0.3310305849545325 0.10686414037450497 6.816169532925995 2471824.382796321 0.02954747564741893 0.04719772923023088 5.476356032250124e-06 5.261508324998369 -0.1765801822844063 AANMLQQS(ph)GSK ddPTM_KYSE-520_SHP099_60min_R1 5 AANMLQQSGSK 11 0 P46063 P46063 RECQL ATP-dependent DNA helicase Q1 1 AANMLQQS(0.995)GS(0.005)K;AANMLQQS(0.528)GS(0.472)K;AANMLQQS(1)GSK;AANMLQQS(0.795)GS(0.205)K;AANMLQQS(0.997)GS(0.003)K 273.74 9.072e-21 3836980000.0 7757810.0 6768610.0 6505210.0 5660490.0 5689920.0 6425480.0 5921310.0 6673030.0 7923400.0 6716660.0 True False 7327468.814489166 6443435.815709254 6924546.245304018 6198461.267711619 6137684.332783744 6385376.195909221 6519893.801216613 6649882.816426916 6484710.292659699 6657155.617882403 1.1006906305158577 0.9678962285936269 1.0401658970842371 0.9310975472860147 0.9219679822861194 0.9591748431953235 0.9793813116975847 0.9989075211887867 0.9740962454355908 1.0 22.6664744624598 AANMSDVS(ph)DLR ddPTM_KYSE-520_SHP099_60min_R1 2 AANMSDVSDLR 11 0 Q5H8Y1;P08922 Q5H8Y1 ROS1 Tyrosine-protein kinase receptor;Proto-oncogene tyrosine-protein kinase ROS 1 AANMSDVS(1)DLR;AANMSDVS(1)DLR 116.84 0.025021 3376800000.0 27908.0 20077.0 39401.0 21185.9 12409.0 37122.0 32439.0 34001.0 15854.0 39432.0 True False 26359.887606781267 19112.470783808607 41940.85150382897 23199.401566226898 13385.5177024481 36890.30782829328 35718.25069413118 33883.058466893075 12975.313246816611 39082.66315763176 0.6744649795348941 0.48902682774514233 1.0731318726840415 0.5935982784145737 0.3424924665051716 0.9439046586846941 0.913915475771676 0.8669587927064447 0.33199665013828245 1.0 15.254241157843493 AAPAQVRPPS(ph)PGNIRPVK ddPTM_KYSE-520_SHP099_60min_R1 2 AAPAQVRPPSPGNIRPVK 18 2 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AAPAQVRPPS(1)PGNIRPVK;AAPAQVRPPS(1)PGNIRPVK 92.098 0.00093936 5182300000.0 542440.0 557970.0 410300.0 349970.0 416390.0 444360.0 435520.0 586590.0 510520.0 520800.0 True False 512349.7718726684 531164.2836699549 436748.5945032116 383231.04357768275 449157.5240649826 441586.58441302757 479546.6118655935 584555.256201135 417822.4371619033 516186.1171762687 0.9925679029792848 1.029016988243741 0.8461068207188328 0.7424280328849214 0.8701464629115606 0.855479389543972 0.9290188091243 1.1324505575602672 0.8094414461348718 1.0 18.977531815112624 -10.611775252950551 8.987917285850065 1.000028361591955 0.9124887144503828 0.05608443978310973 0.10846051429519406 6.535593481610818e-05 2.8229378443676294e-06 0.11134668122245879 0.026996796724549 2.4446953533027392e-11 10.611775252950551 -0.08753964714157214 AAPEAS(ph)SPPAS(ph)PLQHLLPGK ddPTM_KYSE-520_SHP099_60min_R1 5 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 AAPEAS(0.537)S(0.467)PPAS(0.996)PLQHLLPGK;AAPEAS(0.594)S(0.498)PPAS(0.908)PLQHLLPGK;AAPEAS(0.52)S(0.52)PPAS(0.96)PLQHLLPGK;AAPEAS(0.5)S(0.5)PPAS(1)PLQHLLPGK;AAPEAS(0.5)S(0.5)PPAS(1)PLQHLLPGK 133.1 4.747e-06 131774110000.0 2092470.0 2073640.0 1994780.0 2185260.0 2253480.0 2516070.0 2379810.0 2677730.0 3289070.0 2871990.0 True False 1976396.5178644676 1974019.221802905 2123366.7105608466 2392946.453377622 2430816.0554527156 2500366.273841221 2620384.4195073894 2668441.579616878 2691857.798707401 2846546.4029744095 0.6943138238671585 0.6934786728718757 0.745944878447125 0.8406490232785904 0.8539527242249452 0.8783859174853224 0.9205486398427585 0.9374312594477904 0.9456574450690944 1.0 21.440781187337233 -4.970867034924773 0.3465754667085075 0.9938163289780297 0.5239764617370775 0.9753284547433239 0.0160746948389384 0.5808909146354853 0.08077052453974104 0.017400585443183486 0.10997440452786585 1.0693822348089727e-05 4.970867034924773 -0.4698398672409523 AAPEAS(ph)SPPASPLQHLLPGK ddPTM_KYSE-520_SHP099_60min_R1 7 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 AAPEAS(0.571)S(0.427)PPAS(0.002)PLQHLLPGK;AAPEAS(0.573)S(0.427)PPASPLQHLLPGK;AAPEAS(0.5)S(0.5)PPASPLQHLLPGK;AAPEAS(0.5)S(0.5)PPASPLQHLLPGK;AAPEAS(0.575)S(0.425)PPASPLQHLLPGK;AAPEAS(0.5)S(0.5)PPASPLQHLLPGK;AAPEAS(0.5)S(0.5)PPASPLQHLLPGK 231.12 4.2101e-20 15892690000.0 4180300.0 6847450.0 5089230.0 7920920.0 3699350.0 5015800.0 3563400.0 3769040.0 4855680.0 4701990.0 True False 3948410.4257785487 6518488.22376801 5417289.908855905 8673721.855288565 3990467.7985777534 4984494.531683453 3923623.247432622 3755966.0799405496 3974010.9137317077 4660334.026692861 0.8472376450192952 1.3987169560019201 1.1624252420164412 1.8611802942897093 0.8562621854402852 1.0695573542870334 0.8419188892811971 0.805943535040109 0.8527309182066951 1.0 22.152001932225833 AAPEASS(ph)PPAS(ph)PLQHLLPGK ddPTM_KYSE-520_SHP099_60min_R1 14 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 AAPEAS(0.472)S(0.535)PPAS(0.993)PLQHLLPGK;AAPEAS(0.447)S(0.553)PPAS(0.999)PLQHLLPGK;AAPEAS(0.55)S(0.632)PPAS(0.818)PLQHLLPGK;AAPEAS(0.247)S(0.753)PPAS(1)PLQHLLPGK;AAPEAS(0.12)S(0.88)PPAS(1)PLQHLLPGK;AAPEAS(0.203)S(0.853)PPAS(0.944)PLQHLLPGK;AAPEAS(0.084)S(0.916)PPAS(1)PLQHLLPGK;AAPEAS(0.274)S(0.804)PPAS(0.923)PLQHLLPGK;AAPEAS(0.083)S(0.917)PPAS(1)PLQHLLPGK;AAPEAS(0.069)S(0.931)PPAS(1)PLQHLLPGK;AAPEAS(0.143)S(0.858)PPAS(0.999)PLQHLLPGK;AAPEAS(0.434)S(0.566)PPAS(1)PLQHLLPGK;AAPEAS(0.083)S(0.917)PPAS(1)PLQHLLPGK;AAPEAS(0.181)S(0.819)PPAS(1)PLQHLLPGK 222.16 3.6830999999999993e-19 354262390000.0 7356300.0 7260070.0 6868910.0 7900660.0 7634560.0 8687770.0 8604770.0 9496680.0 11700320.0 10274270.0 True False 6948231.374579514 6911285.339612764 7311690.929244591 8651536.350979958 8235356.437295675 8633546.404865345 9474624.126062425 9463738.233621785 9575836.829064805 10183247.961061114 0.6823197668512331 0.6786916478946855 0.7180116753714695 0.849585160261427 0.8087160863396609 0.8478185386311375 0.9304127879721344 0.9293437879357742 0.9403519256018376 1.0 23.279694448607703 -5.289051536071105 0.3374458217053714 1.0010158838810983 0.5361187803548982 0.9401491422848516 0.026654091097104673 0.7706559012753968 0.1179971847588509 0.030227837149706033 0.13890190251083773 5.139826556004256e-06 5.289051536071105 -0.46489710352620006 AAPEASS(ph)PPASPLQHLLPGK ddPTM_KYSE-520_SHP099_60min_R1 3 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 AAPEAS(0.422)S(0.578)PPASPLQHLLPGK;AAPEAS(0.098)S(0.902)PPASPLQHLLPGK;AAPEAS(0.09)S(0.91)PPASPLQHLLPGK 255.72 1.9924e-27 11708600000.0 2466840.0 3747040.0 2853370.0 4692060.0 2120010.0 2919870.0 1991880.0 2176740.0 2824820.0 2775790.0 True False 2329999.4676763793 3567026.5739782974 3037302.795753419 5137991.971680718 2286842.725793131 2901646.0082592163 2193238.669275441 2169189.396994934 2311903.8959172764 2751198.6601319397 0.8469033884905421 1.296535443139258 1.1039925396037227 1.8675466974218118 0.8312168651912111 1.0546842909992045 0.7971938562845402 0.7884524765255977 0.8403260474859362 1.0 21.39162888769121 AAPEASSPPAS(ph)PLQHLLPGK ddPTM_KYSE-520_SHP099_60min_R1 1 AAPEASSPPASPLQHLLPGK 20 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 AAPEAS(0.095)S(0.095)PPAS(0.81)PLQHLLPGK 67.456 0.017027 152590000.0 148060.0 222580.0 190050.0 256300.0 174190.0 178840.0 152160.0 148110.0 184000.0 191910.0 True False 139846.81664970744 211886.92270060882 202300.9270907515 280658.67494059535 187897.76199447448 177723.7932226702 167541.81773849385 147596.24097913396 150590.23826253685 190209.8267037209 0.7352239317663589 1.113964122530079 1.0635671699857243 1.4755214270699142 0.9878446621327941 0.9343565277492236 0.8808262992608908 0.7759653827403791 0.7917058801441565 1.0 17.537232255706332 -6.276874831519186 2.7337469744951877 0.8525955834725153 1.104438770479054 0.24457803607157036 0.17805563696056864 0.3767489687718304 5.618010442633674 0.06898982532893039 0.06331718407101769 5.285975775008032e-07 6.276874831519186 0.2518431870065386 AAPPPPPPPPPLES(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 4 AAPPPPPPPPPLESSPR 17 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.563)S(0.437)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR;AAPPPPPPPPPLES(0.5)S(0.5)PR 162.78 4.2881e-08 4174670000.0 1870260.0 1900680.0 1649560.0 1466030.0 1745080.0 1722380.0 1664410.0 1851750.0 2024700.0 1648540.0 True False 1766512.9495291219 1809368.479821158 1755893.2769893175 1605361.0504220093 1882407.8678530212 1711629.987535577 1832664.8058762266 1845326.711451697 1657065.5185334678 1633935.218144713 1.0811401394083098 1.107368553984438 1.074640694129284 0.9825120559215629 1.1520700741063907 1.0475507036803358 1.1216263567396298 1.129375688191 1.014156191831778 1.0 20.639919354329137 -7.883282582203809 6.769176668968338 1.0009661911928673 1.0856764381743254 0.3357314377346273 0.045110120126836184 0.24328902117005888 12.605927162103713 0.04295720324742662 0.011136445995328386 1.3083303552351294e-08 7.883282582203809 0.08471024698145802 AAPPPPPPPPPLESS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 AAPPPPPPPPPLESSPR 17 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 AAPPPPPPPPPLES(0.48)S(0.52)PR;AAPPPPPPPPPLES(0.18)S(0.82)PR;AAPPPPPPPPPLES(0.327)S(0.673)PR 179.92 6.831699999999999e-09 3829260000.0 1046540.0 1073010.0 1034807.0 853736.0 1044254.0 1131900.0 869658.0 977390.0 1407460.0 1215630.0 True False 988486.3399742318 1021460.9889791553 1101512.314969741 934874.8127549124 1126430.8488074963 1124835.392243014 957571.5176841685 973999.662214541 1151900.7431792936 1204860.46394583 0.8204156162092092 0.8477836393053725 0.9142239686099157 0.7759195697178624 0.9349056446906039 0.9335814610094021 0.7947571908436531 0.8083920846939929 0.9560449343709916 1.0 20.200434645547244 -7.924224612501435 5.212404936236884 0.9990329391115816 0.8567342214064031 0.46312302682406603 0.0543572441123347 0.16564821913790792 7.36009048468282 0.05341681362242002 0.013920987507288847 1.190626069583107e-08 7.924224612501435 -0.14229871770517855 AAPQS(ph)PSVPK ddPTM_KYSE-520_SHP099_60min_R1 8 AAPQSPSVPK 10 0 E9PF10;O75694-2;O75694 E9PF10 NUP155 Nuclear pore complex protein Nup155 1 AAPQS(0.994)PS(0.006)VPK;AAPQS(0.794)PS(0.206)VPK;AAPQS(0.973)PS(0.027)VPK;AAPQS(0.815)PS(0.185)VPK;AAPQS(1)PSVPK;AAPQS(0.995)PS(0.005)VPK;AAPQS(0.985)PS(0.015)VPK;AAPQS(0.998)PS(0.002)VPK 216.97 3.9146e-09 50548900000.0 34442200.0 39014300.0 27972400.0 22372370.0 25087800.0 36083800.0 27709800.0 34963100.0 40240500.0 38368500.0 True False 32531622.507176504 37139994.4663418 29775545.661422472 24498633.3183017 27062067.129944157 35858587.61959404 30510977.005586945 34841821.16654887 32933839.580454405 38028584.940241285 0.8554518280997625 0.9766336171778196 0.7829780074176368 0.6442162745944725 0.7116243523778208 0.9429377316022352 0.802316916433582 0.9162008321187827 0.8660285317533418 1.0 25.18058092088505 -7.915216050374968 0.7654405518492935 0.9940741248570306 0.8096956767788676 0.25806990851472733 0.09439697376776658 1.0275143931776884 1.3825419571383197 0.10085045146348673 0.03892889273869776 1.2155811297449249e-08 7.915216050374968 -0.18437844807816306 AAPQSPS(ph)VPK ddPTM_KYSE-520_SHP099_60min_R1 2 AAPQSPSVPK 10 0 E9PF10;O75694-2;O75694 E9PF10 NUP155 Nuclear pore complex protein Nup155 1 AAPQS(0.451)PS(0.549)VPK;AAPQS(0.074)PS(0.926)VPK 166.29 2.2986e-05 2576600000.0 3607400.0 3997100.0 2862700.0 2442900.0 2655100.0 3860900.0 2876700.0 3641000.0 4073400.0 3969600.0 True False 3407290.330826384 3805073.3162305853 3047234.222481944 2675072.4815153326 2864041.264547503 3836802.6909718644 3167504.909886468 3628370.22081579 3333773.242057699 3934432.432302071 0.8660182604362959 0.9671212764999001 0.7745041438413979 0.6799131838058087 0.7279426737725745 0.975185813199216 0.8050728953637497 0.922209310554305 0.847332696499525 1.0 21.90772410183942 -6.26114390316999 24.998961913420633 0.8985427693102006 0.803779848022213 0.25711786488017285 0.08977319472721865 48.77906411944306 4127129.152750267 0.033154221093537266 0.031182631240778313 5.480953238305668e-07 6.26114390316999 -0.09476292128798758 AAPRPEAS(ph)SPPLPLEK ddPTM_KYSE-520_SHP099_60min_R1 2 AAPRPEASSPPLPLEK 16 1 Q66PJ3-4;Q66PJ3-3;F5H7X4;Q66PJ3;Q66PJ3-2;A0A0A0MTG7;Q66PJ3-6;Q66PJ3-5 Q66PJ3-4;Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 AAPRPEAS(0.5)S(0.5)PPLPLEK;AAPRPEAS(0.664)S(0.336)PPLPLEK 75.533 0.009234299999999999 815190000.0 439350.0 404030.0 324390.0 310410.0 302630.0 379890.0 342900.0 382300.0 433540.0 381710.0 True False 414978.3796774882 384619.79233860614 345300.6984423509 339911.27307183074 326445.2592708411 377518.96559696 377563.6783815034 380973.89052949107 354820.064654023 378328.34636588633 1.0968736116752857 1.0166295918166155 0.9127011014617605 0.8984557364969371 0.8628622793046852 0.9978606393713264 0.9979788245006537 1.0069927199191313 0.9378627535111308 1.0 18.529279349236504 -9.525553332144211 14.244777730896626 0.9999574784893253 0.9670039019718732 0.0174757166221039 0.06494757213868899 0.0 0.0 0.06816857186382475 0.01653330718482692 2.9815813818818817e-10 9.525553332144211 -0.03295357651745201 AAPT(ph)TPPPPVKR ddPTM_KYSE-520_SHP099_60min_R1 1 AAPTTPPPPVKR 12 1 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 AAPT(0.5)T(0.5)PPPPVKR 50.563 0.056875 1250400000.0 2528900.0 2515300.0 1439300.0 1404700.0 2315600.0 2293000.0 1687400.0 2214300.0 2164400.0 1624300.0 True False 2388616.875762833 2394461.2124577267 1532079.5809614225 1538202.2656615463 2497824.5460382653 2278688.5364548396 1857978.859437004 2206619.1101215067 1771399.5200838824 1609909.9656862756 1.4836959374585947 1.487326163259702 0.9516554426124846 0.9554585650420757 1.5515305820058625 1.4154136473610037 1.1540886751669874 1.370647525112291 1.1003096805657493 1.0 20.618548577111294 -7.9371180294243535 4.78783797582847 1.001433432881487 1.2868330077112273 0.19607022214587344 0.20319044412841544 0.3229428282972181 13.765489449650227 0.20846080234433623 0.054467215318443465 1.155798085030576e-08 7.9371180294243535 0.28539957482974043 AAPTRGS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 5 AAPTRGSPTK 10 1 Q8IYH5;Q8IYH5-4;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 AAPTRGS(0.967)PT(0.032)K;AAPTRGS(0.853)PT(0.147)K;AAPTRGS(0.978)PT(0.022)K;AAPTRGS(0.952)PT(0.048)K;AAPTRGS(0.889)PT(0.111)K 119.16 0.00035186 6775100000.0 9770500.0 9012700.0 8986600.0 6945300.0 8092000.0 7680700.0 6787100.0 7007000.0 10461200.0 7133700.0 True False 9228510.887991121 8579716.363661489 9565890.615068384 7605379.223819409 8728794.36281811 7632761.902288997 7473206.303712737 6982694.352446089 8561709.78539157 7070500.967934623 1.3052131567258491 1.213452399281366 1.3529296804357405 1.0756492727050753 1.2345369023219148 1.0795220786906443 1.0569557005372632 0.9875812738182562 1.2109056804064826 1.0 22.75338100760495 -5.7106509538623005 0.8427807733911156 1.0585639471483193 1.2931600326614645 0.521904574934482 0.08416273209314512 0.5217611374266596 0.7939850210280187 0.04179642622794546 0.07439744898731415 1.9469242123946798e-06 5.7106509538623005 0.23459608551314526 AAQDRDQIYR ddPTM_KYSE-520_SHP099_60min_R1 3 AAQDRDQIYR 10 1 P62995;P62995-3;H7C2L4 P62995 TRA2B Transformer-2 protein homolog beta 0 ;; 177.57 2.4421999999999998e-05 3456940000.0 2188740.0 2242480.0 1663660.0 1224920.0 2106820.0 2067760.0 1636180.0 1727470.0 1959170.0 1735380.0 False True 2067326.229054983 2134747.894768896 1770902.1855501155 1341336.0285143736 2272614.7478339667 2054854.342843374 1801581.0419779767 1721477.8097645296 1603434.114656597 1720005.8833052095 1.2019297428694566 1.2411282516468531 1.029590772182187 0.7798438607296077 1.3212831246058585 1.194678671037282 1.0474272556068298 1.0008557682701014 0.9322259477248966 1.0 20.713982069019416 -4.762251814164657 24.999198316715667 1.045064448023456 1.221529043628605 0.2222925416477164 0.1366580273454164 33.18960472954173 1021423.4672201984 0.03759113845825037 0.08636363126701634 1.7288136616890436e-05 4.762251814164657 0.17646459560514893 AAQEEYVKR ddPTM_KYSE-520_SHP099_60min_R1 4 AAQEEYVKR 9 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BR68 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;;; 117.71 0.001974 30410900000.0 10124100.0 10120000.0 7429240.0 5998310.0 9486900.0 9334300.0 6886370.0 7603200.0 8835500.0 7351900.0 False True 9562495.991107007 9633820.00957031 7908140.69760428 6568387.578942338 10233465.056922778 9276041.171317218 7582511.484094568 7576826.273800218 7231195.924829588 7286767.885691647 1.3123096743460152 1.3220978300252093 1.0852741327376112 0.9014130382607731 1.4043901517732282 1.2729980310655595 1.0405863893350638 1.0398061791810511 0.9923735788303095 1.0 22.796847604825608 -1.0000000002861256 0.13608270374895934 0.9333228755412182 2.162199919174816 0.2783302845502159 0.13999997703138942 120.20694102579719 1.0987755029518427 0.7209688627966728 28.57867561507538 0.09999999993411715 1.0000000002861256 1.2288770436335978 AAQNS(ph)GEAEY(ph)IEKVVY(ph)T(ph)VKQS(ph)AEDVK ddPTM_KYSE-520_SHP099_60min_R1 2 AAQNSGEAEYIEKVVYTVKQSAEDVK 26 2 G3XAI2;P07942 G3XAI2 LAMB1 Laminin subunit beta-1 5 AAQNS(1)GEAEY(1)IEKVVY(1)T(1)VKQS(1)AEDVK;AAQNS(1)GEAEY(1)IEKVVY(1)T(1)VKQS(1)AEDVK 55.36600000000001 0.03228 2354400000.0 585270.0 495720.0 479760.0 275216.0 569960.0 507870.0 409760.0 458920.0 675160.0 611700.0 True False 552803.9063931807 471904.8671091097 510686.09724314057 301372.4458932923 614812.6093712072 504700.19494518876 451182.53967222094 457328.11363273335 552567.9633985554 606280.8138953979 0.9117951512293054 0.7783602190494647 0.8423260072538756 0.49708392379589356 1.0140723494464419 0.8324528558020063 0.7441807976296341 0.7543173116338076 0.9114059866883572 1.0 19.20962664268474 -7.964446854150396 4.188328891741124 0.9991695312460885 0.79490451709583 0.217089668212876 0.12601524894068913 0.2670443835267703 10.713825269302818 0.11877871283832839 0.03118720278688839 1.0853083537734735e-08 7.964446854150396 -0.20426501415025855 AAQQAASSSGQGQQAQT(ph)PTGK ddPTM_KYSE-520_SHP099_60min_R1 1 AAQQAASSSGQGQQAQTPTGK 21 0 U3KPX3;A0A590UJ43;P48729;P48729-2;H0Y9X2;U3KQK7 U3KPX3 CSNK1A1 Casein kinase I isoform alpha 1 AAQQAASSSGQGQQAQT(0.995)PT(0.005)GK 283.55 3.150399999999999e-40 0.0 65244.0 102350.0 53813.0 56471.0 54280.0 80125.0 64366.0 98922.0 95393.0 107700.0 True False 61624.7852593105 97432.95236951797 57281.87208384428 61837.986861374724 58551.52718904688 79624.91015414028 70872.74343162385 98578.86267056824 78072.03586183787 106745.86178933212 0.5773037401761751 0.9127562486853719 0.5366191356147623 0.5793010223048725 0.5485133213369996 0.7459297139900721 0.663939025303805 0.9234911875564616 0.731382318275875 1.0 16.703820616491196 -7.651884450725507 0.7737175020341839 0.9758536799964738 0.6410963739633422 0.43992975526296274 0.12161230239387168 0.5839040286193314 0.7416664148101197 0.11584484162788418 0.0469778580835845 2.229028130146692e-08 7.651884450725507 -0.3347573060331316 AAQQQQPSAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 AAQQQQPSASPR 12 0 Q86U86-8;Q86U86 Q86U86-8 PBRM1 Protein polybromo-1 1 AAQQQQPS(0.001)AS(0.999)PR;AAQQQQPSAS(1)PR 136.33 0.00036189999999999996 334060000.0 515710.0 472190.0 442630.0 354710.0 374530.0 435110.0 397110.0 442400.0 530790.0 475720.0 True False 487102.5382576026 449505.28362835996 471162.63803304057 388421.53175255016 404003.3802158023 432394.31709414074 437253.7542201182 440865.4176569366 434411.9161270208 471505.4909045596 1.0330792486066722 0.9533405067372739 0.9992728549759594 0.8237900496288664 0.8568370634257982 0.9170504382984257 0.9273566536442001 0.9350165081029247 0.9213294956409168 1.0 18.84691504630145 -5.209480199473111 24.95491393329453 0.9075166407246752 0.9910419122907266 0.38866330082101785 0.047769844909190486 356.9870494749565 171452.82449689304 0.013179977777232722 0.022828366196884498 6.173334369588644e-06 5.209480199473111 0.08352527156605138 AAS(ph)EELLEK ddPTM_KYSE-520_SHP099_60min_R1 3 AASEELLEK 9 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AAS(1)EELLEK;AAS(1)EELLEK;AAS(1)EELLEK 189.13 5.241699999999999e-06 583510000.0 1798300.0 1734210.0 1442080.0 1182650.0 1467840.0 1550560.0 1340210.0 1535980.0 1929580.0 1657730.0 True False 1698544.714177824 1650895.9484977217 1535038.7842095825 1295048.7004233124 1583350.6571328419 1540882.379888971 1475691.5059891348 1530652.0438804268 1579216.9127533985 1643043.8018944236 1.033779326040735 1.0047790245118509 0.9342652840050206 0.7882009590554591 0.96366917017504 0.9378218511961394 0.8981449577227751 0.9315953975880561 0.961153263797695 1.0 20.647939510922892 -4.734116241927693 3.9679616327438776 0.9195556288938893 1.0250740981406221 0.3243581234862427 0.053407073739427054 0.22440638000237367 7.582056442802467 0.014028920228232242 0.038506434542788855 1.844521654099552e-05 4.734116241927693 0.1055184692467328 AAS(ph)GEDSTEEALAAAAAPWEGGPVPGVDTSPFAK ddPTM_KYSE-520_SHP099_60min_R1 1 AASGEDSTEEALAAAAAPWEGGPVPGVDTSPFAK 34 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0 A0A0A0MR88 FAM21C;FAM21D WASH complex subunit FAM21C;Putative WASH complex subunit FAM21 1 AAS(0.333)GEDS(0.333)T(0.333)EEALAAAAAPWEGGPVPGVDTSPFAK 111.24 0.0001574 22403000.0 30857.0 45360.0 28672.0 24729.0 29586.0 38535.0 32365.0 44878.0 46558.0 46622.0 True False 29145.30069809552 43180.83751325192 30520.242996822017 27079.23672495504 31914.249878687195 38294.48877116752 35636.770051960775 44722.32869260393 38104.240831669485 46208.96535136715 0.6307282683452946 0.9344688240671539 0.660483150071635 0.5860169453924782 0.6906506050506706 0.8287242200724697 0.7712090019974104 0.9678279604951329 0.8246070982531125 1.0 15.495885166540099 -6.966758064406862 1.2244108275359615 0.9356087686443899 0.7091405612491244 0.46438583620355134 0.10174203689689011 0.4731875014856947 1.3523518928368747 0.07733254509789297 0.03690997606742537 1.0795479463947618e-07 6.966758064406862 -0.22646820739526552 AAS(ph)KDTISNNR ddPTM_KYSE-520_SHP099_60min_R1 5 AASKDTISNNR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 AAS(0.996)KDT(0.003)ISNNR;AAS(0.936)KDT(0.064)ISNNR;AAS(0.991)KDT(0.009)ISNNR;AAS(1)KDTISNNR;AAS(1)KDTISNNR 234.49 6.5975e-14 1566470000.0 2707220.0 2814800.0 2707470.0 2612700.0 2942260.0 2702060.0 2563310.0 2971350.0 3302680.0 2899240.0 True False 2557045.1098907245 2679572.7828990617 2881997.8483051695 2861010.2224631007 3173799.1228306047 2685195.4412617325 2822434.3902948108 2961043.0803683056 2702996.5657875836 2873554.9891745914 0.8898542465774139 0.932493998894641 1.0029381233915426 0.9956344086823639 1.104485257733751 0.9344506896083573 0.9822099806433616 1.0304459429255066 0.9406454986838447 1.0 21.45440522658882 -4.601785012672528 2.7928871157339943 1.0010979837871932 0.8930105988924559 0.3930007172139691 0.04489554119146921 0.275296117492584 4.054959028344615 0.01187999983179641 0.04763915664211054 2.501583405605271e-05 4.601785012672528 -0.10808738489473724 AAS(ph)LNYLNQPSAAPLQVSR ddPTM_KYSE-520_SHP099_60min_R1 5 AASLNYLNQPSAAPLQVSR 19 0 Q9NSK0-5;Q9NSK0;Q9NSK0-3 Q9NSK0-5 KLC4 Kinesin light chain 4 1 AAS(1)LNYLNQPSAAPLQVSR;AAS(1)LNYLNQPSAAPLQVSR;AAS(1)LNYLNQPSAAPLQVSR;AAS(1)LNYLNQPSAAPLQVSR;AAS(1)LNYLNQPSAAPLQVSR 357.92 9.336699999999998e-78 6352470000.0 2444790.0 2911430.0 2035980.0 1717680.0 1860600.0 2609650.0 1889290.0 2552720.0 3011930.0 2626390.0 True False 2309172.625131962 2771560.532654478 2167222.528483181 1880927.790760679 2007018.634634133 2593362.206349487 2080277.8708935226 2543865.210129328 2465039.436576537 2603122.2279005 0.8870780635584609 1.0647062604086128 0.8325473561151656 0.7225660672406099 0.7710043781743037 0.9962506479924745 0.7991472119890937 0.9772361754142584 0.9469549336393124 1.0 21.31181162345803 -7.288774906367221 23.751933376905566 0.9715717247832371 0.8694990239623899 0.2044717572446687 0.09671214950616887 772.1449893021477 670912.9439106822 0.05682140488639071 0.0273102892984244 5.1431014804623546e-08 7.288774906367221 -0.10207270082084718 AAS(ph)LPGK ddPTM_KYSE-520_SHP099_60min_R1 1 AASLPGK 7 0 Q92545 Q92545 TMEM131 Transmembrane protein 131 1 AAS(1)LPGK 62.823 0.037778 271330000.0 333490.0 431500.0 370740.0 443800.0 402290.0 486340.0 418230.0 557080.0 656040.0 405730.0 True False 314990.6449041672 410770.0923052955 394638.49360497296 485978.6185666647 433947.93428300763 483304.5716613369 460508.76993145497 555147.6195034487 536919.6734225797 402135.54785316315 0.7832947039518718 1.0214717263823818 0.9813568974734667 1.2084945515538363 1.079108615489672 1.201844935722549 1.1451580751563062 1.3804987459257314 1.3351708802889317 1.0 18.617322347119927 -3.504541270432222 0.48764560675606566 1.2382235272631779 0.06375442460959586 0.5756413888554619 0.11041441600401118 6.246479355005019 0.6578020980568366 0.06612245461389975 4.915897250448752 0.00031293830762840893 3.504541270432222 -1.174469102653582 AAS(ph)LTEDRDR ddPTM_KYSE-520_SHP099_60min_R1 2 AASLTEDRDR 10 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 AAS(1)LTEDRDR;AAS(0.939)LT(0.061)EDRDR 156.69 6.4978e-05 607859000.0 228148.0 212054.0 224061.0 182139.0 232947.0 229545.0 223533.0 273997.0 307851.0 240669.0 True False 215492.17563823768 201866.60754045693 238504.33057027578 199449.43579791262 251278.60361287586 228112.32450960568 246129.8971118476 273046.5683583808 251953.018692175 238536.8598976487 0.9033915166431761 0.8462700801338366 0.9998636297661213 0.8361367542252895 1.0534162465318542 0.9562980103263035 1.0318317144673443 1.144672435427965 1.0562435457575945 1.0 17.863852690280602 -6.15731852544871 0.9250630986372143 1.07208200885837 0.8933802400144012 0.500414807386865 0.06582592318994701 0.43559019193935256 0.8053711484014552 0.036742622932906616 0.03764295202838494 6.961157732878585e-07 6.15731852544871 -0.17870176884396882 AAS(ph)PAKPSSLDLVPNLPK ddPTM_KYSE-520_SHP099_60min_R1 2 AASPAKPSSLDLVPNLPK 18 1 Q8N3V7-3;Q8N3V7-2;Q8N3V7 Q8N3V7-3 SYNPO Synaptopodin 1 AAS(0.996)PAKPS(0.002)S(0.002)LDLVPNLPK;AAS(0.986)PAKPS(0.007)S(0.007)LDLVPNLPK 98.12100000000001 0.00055694 1039340000.0 1527180.0 1426350.0 900910.0 812220.0 979930.0 1280550.0 988640.0 1208930.0 1530650.0 1201410.0 True False 1442464.2810421458 1357826.005005002 958984.1001069654 889413.1445971514 1057044.9159609922 1272557.6124540973 1088581.3793965855 1204736.503996383 1252722.5445464768 1190766.4420828375 1.211374649187333 1.1402958271396624 0.8053502905486248 0.7469249326857316 0.8877012977558006 1.0686878362378052 0.914185469899946 1.0117319916146694 1.0520304404575496 1.0 20.1834590388723 -4.621247234786028 6.264030482502936 0.9322992735822668 1.193700017666734 0.49153675373210204 0.09860452843054666 0.17002037099619752 8.901374549084624 0.027966775018406633 0.07600690206548241 2.3919536794249024e-05 4.621247234786028 0.26140074408446723 AAS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 9 AASPFR 6 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 AAS(1)PFR;AAS(1)PFR;AAS(1)PFR;AAS(1)PFR;AAS(1)PFR;AAS(1)PFR;AAS(1)PFR;AAS(1)PFR;AAS(1)PFR 121.85 0.006473100000000001 52995260000.0 9728100.0 8726410.0 8197030.0 7305220.0 7878890.0 7723270.0 7159620.0 7153280.0 9447580.0 6999730.0 True False 9188462.900513439 8307180.164991541 8725423.669511717 7999505.9124055235 8498913.818248158 7675066.207128453 7883384.260757585 7128466.9412681 7732137.626110737 6937717.83790754 1.3244215338807637 1.1973937768989809 1.257679235934934 1.153045727616133 1.225030192466214 1.1062811123842566 1.1363079970884582 1.027494502921164 1.114507364923737 1.0 22.726029735672107 -3.6597855883443473 0.16834037235090643 0.9600177888956799 1.6644322272885506 0.8005862171743579 0.042503061638827506 10.07402622645826 0.2438474196746082 0.1294615200412578 1.558282863763217 0.00021888419908978294 3.6597855883443473 0.7044144383928707 AAS(ph)PHQVTPQADEK ddPTM_KYSE-520_SHP099_60min_R1 1 AASPHQVTPQADEK 14 0 Q96L73-2;Q96L73;Q96L73-3 Q96L73-2 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific 1 AAS(1)PHQVTPQADEK 186.56 6.554100000000001e-09 0.0 206800.0 201200.0 147090.0 131170.0 165930.0 161430.0 148250.0 182210.0 217750.0 183170.0 True False 195328.3917544205 191534.04999264274 156571.65675232117 143636.3573623015 178987.74698744543 160422.455490582 163236.55678057123 181577.95603813362 178212.08903080074 181547.25630410374 1.0759093567750342 1.0550093341637203 0.862429209561026 0.7911788935091425 0.985901691004512 0.8836402089264501 0.8991408633966858 1.000169100512202 0.9816292058541696 1.0 17.469985601510356 -9.897945182910822 12.27994968151261 1.0000019889909117 0.9436027321230166 0.0297637463233138 0.08470299396732905 0.0 0.0 0.08806451161654452 0.021358781368438037 1.2648959938484764e-10 9.897945182910822 -0.05639925686789515 AAS(ph)PPASASDLIEQQQK ddPTM_KYSE-520_SHP099_60min_R1 8 AASPPASASDLIEQQQK 17 0 Q5VSL9;Q5VSL9-2;Q5VSL9-3 Q5VSL9 STRIP1 Striatin-interacting protein 1 1 AAS(1)PPASASDLIEQQQK;AAS(1)PPASASDLIEQQQK;AAS(1)PPASASDLIEQQQK;AAS(1)PPASASDLIEQQQK;AAS(0.998)PPAS(0.002)ASDLIEQQQK;AAS(1)PPASASDLIEQQQK;AAS(1)PPASASDLIEQQQK;AAS(1)PPASASDLIEQQQK 450.77 7.2363e-119 9956140000.0 2333744.0 2793754.0 2011675.0 1703096.0 1771914.0 2631985.0 1994058.0 2493660.0 2845560.0 2592340.0 True False 2204286.5681166775 2659537.8643297534 2141350.789293803 1864957.7317855163 1911353.5509884448 2615557.805329739 2195636.8427706705 2485010.0754846195 2328878.03473013 2569373.884410003 0.85790806137303 1.035091809902339 0.8334134639908641 0.725841319981253 0.7438985671123308 1.0179747763453044 0.8545415893315376 0.9671656159357455 0.9063990448649331 1.0 21.292985409713385 -6.269727488093269 24.970707278865902 0.9412468870454921 0.8434892356094859 0.2728107705744238 0.08917587833628901 1067.5652238670486 3216388.3934383374 0.03399763057857688 0.030493698838361123 5.373688798233655e-07 6.269727488093269 -0.09775765143600623 AAS(ph)PPLK ddPTM_KYSE-520_SHP099_60min_R1 3 AASPPLK 7 0 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 AAS(1)PPLK;AAS(1)PPLK;AAS(1)PPLK 105.1 0.0040438 2437630000.0 10839300.0 9293300.0 7592500.0 8077000.0 9060600.0 11014500.0 9697900.0 11801800.0 11620800.0 11119800.0 True False 10238022.421391144 8846835.918472305 8081924.698429524 8844635.651561407 9773617.672237987 10945754.419878677 10678258.374383137 11760862.310360814 9510755.65652873 11021287.223073486 0.9289316405761981 0.8027044155015864 0.7333013408370036 0.8025047775766904 0.8867945707627095 0.9931466441563487 0.9688757908448111 1.0671042385810432 0.8629441792078152 1.0 23.39378939645934 -6.038091857019409 2.9392321130500143 0.9819709870167823 0.8104361938800909 0.5766110251190806 0.06515752950651178 0.18579433111925642 3.2177033341105616 0.0224989300325375 0.02385664027115042 9.160267220980892e-07 6.038091857019409 -0.1715347931366914 AAS(ph)PPLKGSVSSEASELDKK ddPTM_KYSE-520_SHP099_60min_R1 2 AASPPLKGSVSSEASELDKK 20 2 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 AAS(0.696)PPLKGS(0.207)VS(0.041)S(0.052)EAS(0.005)ELDKK;AAS(0.684)PPLKGS(0.2)VS(0.097)S(0.017)EAS(0.001)ELDKK 80.172 0.0046575 4710900000.0 4774600.0 4034800.0 3965300.0 3639100.0 3985100.0 4038000.0 3481200.0 4067700.0 5299900.0 3924900.0 True False 4509743.420070867 3840962.151641727 4220909.582704322 3984958.969864693 4298704.697882656 4012797.3441799567 3833113.669237932 4053590.09810832 4337571.759606619 3890128.4395259945 1.1592787976482266 0.9873612687476565 1.0850309053596783 1.0243772234806348 1.105028989327264 1.0315333816250316 0.9853437306314211 1.042019604525511 1.1150201920158567 1.0 21.891386358470907 AAS(ph)PS(ph)PQS(ph)VR ddPTM_KYSE-520_SHP099_60min_R1 1 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 AAS(1)PS(1)PQS(1)VR 103.85 0.0080752 0.0 334060.0 301260.0 307230.0 275820.0 303770.0 293440.0 284740.0 295580.0 379970.0 330940.0 True False 315529.02586790017 286787.01739952085 327034.53738538036 302033.84987169347 327674.97078512824 291608.5321139589 313524.29799460265 294554.70196889027 310977.02626421815 328008.1290674242 0.9619548965600213 0.8743289936590867 0.9970318062396444 0.9208120869760774 0.9989842987024645 0.889028369336593 0.955843072810417 0.8980103718964313 0.9480771929292484 1.0 18.323372044218992 -8.028168415203982 23.224414303504812 1.000000002114457 0.9365655600843575 0.17727320926479195 0.040541775879302765 2025.1575179296613 1669710.670246687 0.036205320256888315 0.009348173488306154 9.371984999250098e-09 8.028168415203982 -0.06343444203009951 AAS(ph)PS(ph)PQSVR ddPTM_KYSE-520_SHP099_60min_R1 6 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 AAS(1)PS(1)PQSVR;AAS(1)PS(1)PQSVR;AAS(1)PS(1)PQSVR;AAS(1)PS(1)PQSVR;AAS(1)PS(0.998)PQS(0.003)VR;AAS(1)PS(1)PQSVR 179.93 4.6501000000000006e-07 9869220000.0 9899340.0 8805390.0 8304930.0 7895760.0 8573620.0 8758120.0 8094530.0 8593170.0 10029550.0 8377370.0 True False 9350203.876354955 8382365.847240143 8840279.076157825 8646170.656453194 9248315.116775159 8703457.324420346 8912804.087399913 8563362.298930954 8208436.544380571 8303153.019295234 1.126102801505228 1.0095400901032212 1.0646894084228478 1.0413117325865053 1.1138317089042578 1.0482111198233812 1.0734240434552929 1.0313386106495972 0.9885927099386754 1.0 22.985227855363007 -7.531027102546132 3.028478271795968 0.9945318170251217 1.0656492961118573 0.4614880429342548 0.03195717968924339 0.23413522244744478 4.246800048925442 0.023483771058660174 0.008174922488159818 2.9442378901950482e-08 7.531027102546132 0.0711174790867356 AAS(ph)PSPQS(ph)VRR ddPTM_KYSE-520_SHP099_60min_R1 1 AASPSPQSVRR 11 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 AAS(0.726)PS(0.308)PQS(0.967)VRR 95.66 0.0014536 0.0 267790.0 289680.0 283770.0 209380.0 261730.0 219560.0 208160.0 202580.0 284490.0 222940.0 True False 252935.15487387002 275763.3379814553 302062.2682480533 229279.41224760746 282326.66196000844 218189.64459835354 229202.84424582575 201877.29726252734 232833.78740928823 220964.92504469535 1.1446846363634768 1.2479959791160327 1.3670145530425435 1.0376280860015692 1.277698991832759 0.9874401765539013 1.0372815694593343 0.9136169336454323 1.0537137844940418 1.0 17.753457855455935 -6.2702623320924324 24.797176555984088 0.9954409791412568 1.2154280756973612 0.6052586198810675 0.08744175211245979 396.27611293721776 1113742.8715365406 0.0300198008738697 0.02686771699526678 5.367075045812498e-07 6.2702623320924324 0.21998709655610438 AAS(ph)PSPQSVR ddPTM_KYSE-520_SHP099_60min_R1 7 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 AAS(0.895)PS(0.104)PQSVR;AAS(0.987)PS(0.013)PQSVR;AAS(0.798)PS(0.18)PQS(0.022)VR;AAS(0.791)PS(0.209)PQSVR;AAS(0.98)PS(0.02)PQSVR;AAS(0.954)PS(0.046)PQSVR;AAS(0.921)PS(0.077)PQS(0.002)VR 120.55 0.000515 12772660000.0 8842850.0 8512430.0 7155040.0 5866110.0 6730490.0 8495180.0 7151110.0 7893530.0 9453450.0 8045130.0 True False 8352319.482715564 8103480.085382085 7616265.326868771 6423623.330689718 7260141.271750331 8442158.430492973 7874013.9869079795 7866149.18679376 7736941.782081408 7973856.4072164195 1.0474629910762667 1.0162560838251808 0.9551545623490253 0.8055855288385021 0.9104931040869799 1.058729678509477 0.9874787787477485 0.9864924554792355 0.9702885764382964 1.0 22.926846194917502 -6.242909242865598 24.74918380158324 0.9989337399110141 0.943436279663557 0.14763891953448172 0.06405694626040878 1632.691488338168 2180653.142509067 0.023752100732337432 0.023708985716214773 5.715980744849774e-07 6.242909242865598 -0.05549746024745705 AAS(ph)PVLLSSNSQK ddPTM_KYSE-520_SHP099_60min_R1 5 AASPVLLSSNSQK 13 0 P41970;G3V1Z7 P41970 ELK3 ETS domain-containing protein Elk-3 1 AAS(1)PVLLSSNSQK;AAS(1)PVLLSSNSQK;AAS(1)PVLLSSNSQK;AAS(1)PVLLSSNSQK;AAS(1)PVLLSSNSQK 296.1 2.1452e-30 2392130000.0 2337000.0 2730180.0 1914330.0 1676470.0 1740390.0 2316590.0 1762840.0 2387590.0 2716140.0 2557470.0 True False 2207361.9513060017 2599018.0547162727 2037730.7748362976 1835801.2047509141 1877348.7915354704 2302131.3025145703 1941045.0708604488 2379308.0075576943 2222957.444317429 2534812.805481554 0.8708185261383259 1.0253293849138976 0.8038979329872753 0.7242354152468296 0.7406262061938806 0.9082056464036287 0.7657547991957917 0.9386523542931536 0.8769710487142344 1.0 21.273447778258802 -8.01707053655308 1.1172536253994823 0.9957660046528 0.8370086437469825 0.23015573937437095 0.08785635058557849 0.8734689382247294 2.4478636273336543 0.08980660779105297 0.028851885851017278 9.614561094467243e-09 8.01707053655308 -0.1587573609058175 AAS(ph)PYSQRPAS(ph)PTAIR ddPTM_KYSE-520_SHP099_60min_R1 2 AASPYSQRPASPTAIR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 2 AAS(0.926)PY(0.061)S(0.135)QRPAS(0.837)PT(0.041)AIR;AAS(0.999)PY(0.001)S(0.002)QRPAS(0.88)PT(0.119)AIR 88.62700000000001 0.0014504000000000001 952660000.0 395390.0 420160.0 384260.0 455650.0 462250.0 394300.0 427070.0 480160.0 538970.0 382890.0 True False 373456.92850957584 399974.8829269821 409030.0144377382 498954.83900383196 498626.4451572762 391839.02744184097 470242.40340154077 478494.43703018635 441106.6343280408 379497.8924839126 0.9840816929580372 1.0539581137303353 1.077818935331973 1.3147763107142507 1.3139109729796816 1.032519640299324 1.239117298711942 1.2608619086085449 1.1623427772968196 1.0 18.533732348189673 -5.057129218048108 6.374343130068233 1.2009415732946944 1.029527098779979 0.3190126323396584 0.1018402297055275 0.23863399835199633 20.991643849909586 0.02738275888577687 0.04878452487622423 8.767399210362612e-06 5.057129218048108 -0.17141447451471548 AAS(ph)SDQLR ddPTM_KYSE-520_SHP099_60min_R1 2 AASSDQLR 8 0 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 AAS(0.799)S(0.201)DQLR;AAS(0.704)S(0.296)DQLR 85.958 0.013942 924450000.0 3150300.0 3040200.0 3038400.0 2129690.0 2613700.0 2964600.0 2460970.0 2408500.0 2784800.0 2710400.0 True False 2975546.579032647 2894144.228566762 3234260.1256118855 2332095.097285351 2819383.320081278 2946096.831737464 2709748.8643526593 2400145.4756481256 2279150.5190951773 2686387.9646592885 1.1076384417207705 1.0773366567452676 1.203943796711464 0.8681155246245781 1.0495071289670765 1.0966758601120794 1.008696026039684 0.8934470773481645 0.8484070614812479 1.0 21.357236241279185 -7.1064949495280185 3.5267937345627667 0.9036607440761879 1.0636766854077042 0.38482847062370074 0.08606051074742417 0.25807238510312047 5.8757447034938135 0.04491096452947989 0.024626501331875286 7.825373052507478e-08 7.1064949495280185 0.1600159413315163 AAS(ph)SDQLRDNS(ph)PPPAFKPEPPK ddPTM_KYSE-520_SHP099_60min_R1 6 AASSDQLRDNSPPPAFKPEPPK 22 2 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 2 AAS(0.991)S(0.009)DQLRDNS(1)PPPAFKPEPPK;AAS(0.658)S(0.343)DQLRDNS(0.999)PPPAFKPEPPK;AAS(0.958)S(0.043)DQLRDNS(0.999)PPPAFKPEPPK;AAS(0.919)S(0.081)DQLRDNS(1)PPPAFKPEPPK;AAS(0.94)S(0.06)DQLRDNS(1)PPPAFKPEPPK;AAS(0.817)S(0.202)DQLRDNS(0.981)PPPAFKPEPPK 114.98 0.00012617 14910670000.0 9748830.0 7166280.0 6583790.0 5827200.0 6640000.0 6909970.0 6310450.0 6460660.0 9113120.0 6515440.0 True False 9208042.966089193 6822001.151994428 7008191.6378364535 6381015.335988442 7162530.223568005 6866842.314106771 6948371.87005703 6438249.478389375 7458407.1310602585 6457718.270535619 1.4258972876073541 1.0564104636030514 1.0852427040387405 0.9881222854057994 1.1091425676230262 1.0633542725822906 1.0759794061874914 0.9969851902280913 1.1549601296622747 1.0 22.622593071507556 -4.26112868705797 24.87732179961355 1.0596692895967137 1.4258974046663375 0.8285501442526441 0.05008079761061502 8.454694325077579 676653.4341150146 0.011436239557299114 0.06493011834766943 5.481145274499863e-05 4.26112868705797 0.3662281150696238 AAS(ph)SPDGFFWTQGSPKPGTASPK ddPTM_KYSE-520_SHP099_60min_R1 2 AASSPDGFFWTQGSPKPGTASPK 23 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 AAS(0.485)S(0.485)PDGFFWT(0.029)QGS(0.001)PKPGTASPK;AAS(0.47)S(0.47)PDGFFWT(0.055)QGS(0.002)PKPGT(0.001)AS(0.001)PK 89.979 4.9938e-05 0.0 698280.0 620600.0 531070.0 567270.0 541370.0 654830.0 517790.0 607480.0 803330.0 607540.0 True False 659545.01641333 590785.4444604083 565303.6219420432 621183.1702440558 583972.7390260556 650742.9630731452 570133.2663434189 605372.7936668984 657465.5223013236 602157.6682589673 1.0953028603294017 0.981114209121608 0.9387966835605015 1.0315955487872426 0.9698003858599189 1.0806853377034187 0.9468172480338225 1.0053393414672058 1.091849455645511 1.0 19.19978176446638 AAS(ph)VPCSVAPEK ddPTM_KYSE-520_SHP099_60min_R1 1 AASVPCSVAPEK 12 0 D6RFX7;Q9C073 D6RFX7 FAM117A Protein FAM117A 1 AAS(0.683)VPCS(0.317)VAPEK 115.12 0.00041022 0.0 305540.0 284210.0 216150.0 208830.0 208970.0 300420.0 224140.0 286780.0 330280.0 318740.0 True False 288591.08712111047 270556.1249920926 230083.3748522279 228677.140412971 225414.75012334436 298544.96734485944 246798.2585955967 285785.2271149555 270309.4776812532 315916.2115759672 0.9135051527791382 0.8564173507981973 0.7283050581812279 0.7238537689224659 0.713527010845215 0.9450131281821523 0.7812142889547472 0.9046234939615746 0.8556366143187081 1.0 18.269182446849687 -8.044999218809698 0.6440719589157284 0.9980983055730872 0.7972237258035909 0.3569888782806796 0.07695081959458495 0.9876081085757354 0.9495917951697742 0.08305092810406473 0.03430513618388859 9.015727593149398e-09 8.044999218809698 -0.2008745797694963 AAS(ph)VPKVETVK ddPTM_KYSE-520_SHP099_60min_R1 1 AASVPKVETVK 11 1 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 1 AAS(1)VPKVETVK 89.624 0.0019979 582240000.0 847650.0 837730.0 778850.0 592480.0 680700.0 851180.0 627830.0 739050.0 1012600.0 854180.0 True False 800629.1647516183 797484.193341635 829055.9172040604 648789.1210643923 734267.217346799 845867.4698908096 691297.1834303273 736486.4080455666 828737.3655687211 846612.6297419843 0.9456853543463201 0.941970584096623 0.9792624018102889 0.7663352733848523 0.8673000987128859 0.9991198337645851 0.8165448507908614 0.8699213573863409 0.9788861357068215 1.0 19.691342485335312 -7.864597144025954 5.458834612023737 0.9977575110589423 0.8978002650000273 0.2228299383051181 0.06843447376996183 0.32135155880890126 13.477943872887648 0.06771336557956212 0.017681374443988755 1.3658495250378101e-08 7.864597144025954 -0.09995724605891498 AASAPAKES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 14 AASAPAKESPR 11 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR;AASAPAKES(1)PR 174.46 1.3895999999999999e-05 290236500000.0 186208600.0 159562280.0 158071330.0 146081120.0 155658970.0 154204140.0 152494940.0 157464720.0 181356420.0 150068680.0 True False 175879237.76035893 151896668.56093484 168260860.8548704 159964625.72390994 167908445.36061242 153241694.76313847 167910616.74239308 156918511.6388618 148426665.7513082 148739188.2468663 1.1824673768452172 1.021228301372924 1.131247674793031 1.075470611406138 1.1288783227855892 1.0302711515999352 1.1288929213712493 1.054991044985536 0.9978988557135368 1.0 27.148209562783197 -7.597986358805478 3.4039172698295737 0.9988089587103554 1.0955409301677108 0.42864250803236303 0.046215494634141596 0.22385007866959802 5.007001571345358 0.03354854437205137 0.011109004008195393 2.5235600362846227e-08 7.597986358805478 0.09673197145735546 AASAPAKES(ph)PRK ddPTM_KYSE-520_SHP099_60min_R1 9 AASAPAKESPRK 12 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AASAPAKES(1)PRK;AASAPAKES(1)PRK;AASAPAKES(1)PRK;AASAPAKES(1)PRK;AASAPAKES(1)PRK;AASAPAKES(1)PRK;AASAPAKES(1)PRK;AASAPAKES(1)PRK;AAS(0.001)APAKES(0.999)PRK 147.39 3.2945e-05 25755760000.0 9476520.0 8573160.0 8693250.0 7901030.0 8127940.0 7787360.0 7934710.0 7798520.0 9606900.0 7815260.0 True False 8950838.544625739 8161292.525024479 9253630.804691782 8651941.51566872 8767562.63634748 7738756.197665483 8736827.922107022 7771468.754308252 7862529.130241113 7746022.8765802765 1.1555399057351308 1.0536106922301702 1.194629934888223 1.116952745108389 1.1318792593365272 0.9990618825905144 1.1279114535695984 1.0032850248615854 1.0150407835759288 1.0 22.885024331454723 -6.78125329571673 0.7161815238527226 0.9989169073335736 1.1336491263761401 0.4989680528724032 0.04952354182750337 0.603172604487915 0.610790430819616 0.041311151133973274 0.0262348943411824 1.654804542132906e-07 6.78125329571673 0.1347322190425665 AASAPAKGT(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 3 AASAPAKGTPGK 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AASAPAKGT(1)PGK;AASAPAKGT(1)PGK;AAS(0.001)APAKGT(0.999)PGK 123.42 0.00029434 6880560000.0 2938740.0 2855180.0 2306180.0 1863820.0 2018380.0 2505600.0 1971190.0 2321990.0 2804360.0 2645920.0 True False 2775722.2339670486 2718012.8670874466 2454840.052818463 2040956.8924220859 2177215.0229887315 2489961.620994873 2170457.122160498 2313935.5586465374 2295158.916162647 2622479.2072946103 1.0584344105555468 1.0364287577674982 0.9360760786930752 0.7782547471663535 0.8302125015644184 0.9494685845626037 0.8276355885389745 0.8823465796068708 0.875186697297161 1.0 21.322499903555936 -4.864748994900151 3.403637191966863 0.8707901543350617 1.0509431835909457 0.5549871466488017 0.05977461381375245 0.15599113647418053 3.498695523795791 0.01563010806109239 0.03818909520038497 1.3653720398344405e-05 4.864748994900151 0.18015302925588406 AASAPAKGT(ph)PGKGATPAPPGK ddPTM_KYSE-520_SHP099_60min_R1 2 AASAPAKGTPGKGATPAPPGK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 AAS(0.022)APAKGT(0.978)PGKGATPAPPGK;AAS(0.011)APAKGT(0.989)PGKGATPAPPGK 137.24 1.5822999999999999e-06 2159300000.0 2585300.0 2878900.0 2595100.0 1640690.0 1709580.0 2572500.0 1613420.0 1899270.0 3274800.0 2562500.0 True False 2441888.2553322194 2740593.3226830005 2762384.2983068065 1796620.6843085638 1844114.219820392 2556444.0732795764 1776520.2390617784 1892681.8756629487 2680178.870989973 2539798.243594836 0.9614496984122508 1.0790594605672137 1.0876392663367314 0.7073871670080467 0.7260868946858664 1.0065539968486552 0.69947297725007 0.7452095379765452 1.0552723539159719 1.0 21.276282466114523 -5.246726656111503 24.777263160059096 0.833219672402799 1.04635049201314 0.31291761408652696 0.1304208105746203 795.9148675662342 1340374.3036749128 0.03490481235696682 0.0601276718803207 5.665957908457163e-06 5.246726656111503 0.21313081961034086 AASEQQADTSGGDS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 AASEQQADTSGGDSPK 16 0 P85037;P85037-2;U3KQ26 P85037 FOXK1 Forkhead box protein K1 1 AASEQQADTSGGDS(1)PK;AASEQQADTSGGDS(1)PK 185.33 2.883e-09 0.0 197821.0 168829.0 112823.0 117734.1 129372.1 184901.0 147519.0 168076.0 167036.0 166212.0 True False 186847.47478361317 160718.20142250453 120095.75110318266 128923.51346595208 139552.94824344307 183746.9642734566 162431.66016669842 167492.98358523322 136706.47303489732 164739.49099097934 1.1341996606863645 0.9755900085384202 0.7290040195022744 0.7825902137394097 0.847112901733347 1.1153789729963295 0.9859910285603147 1.0167142230298907 0.8298342565741142 1.0 17.329826910663943 -6.220190776881428 24.988822177000948 0.9904039463405243 0.8829263595638369 0.13071400966536117 0.12205410793803305 1049.7425124187228 635944.8181341691 0.043150672309104104 0.043150294748188454 6.022949518259422e-07 6.220190776881428 -0.1074775867766874 AASEQQADTSGGDS(ph)PKDESKPPFSYAQLIVQAISSAQDR ddPTM_KYSE-520_SHP099_60min_R1 2 AASEQQADTSGGDSPKDESKPPFSYAQLIVQAISSAQDR 39 2 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 AASEQQADT(0.001)S(0.001)GGDS(0.998)PKDESKPPFSYAQLIVQAISSAQDR;AASEQQADT(0.002)S(0.001)GGDS(0.997)PKDESKPPFSYAQLIVQAISSAQDR 336.37 4.032999999999999e-82 666510000.0 458010.0 505370.0 446650.0 424190.0 411260.0 400500.0 335360.0 443700.0 571890.0 353360.0 True False 432603.27227970044 481091.2666241654 475441.7736652672 464504.8900626256 443623.82225068944 398000.3309420683 369261.46159819415 442160.90826035815 468049.1921737075 350229.5053099199 1.2351993927435885 1.3736457360965213 1.357514905103573 1.3262871432022347 1.2666660447643452 1.1363986326334092 1.0543413847198075 1.2624890294982076 1.3364070847187142 1.0 18.41794110409978 -6.042777097945848 3.4786985537513235 1.1685633649548037 1.327960894470203 0.39995115814146787 0.09556298961795082 0.27266686309297716 6.730567173964995 0.03331493896512686 0.03503006116414487 9.061975883308325e-07 6.042777097945848 0.15939752951539932 AASGEDSTEEALAAAAAPWEGGPVPGVDRS(ph)PFAK ddPTM_KYSE-520_SHP099_60min_R1 9 AASGEDSTEEALAAAAAPWEGGPVPGVDRSPFAK 34 1 Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 Q641Q2 FAM21A WASH complex subunit FAM21A 1 AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDRS(1)PFAK 288.88 9.673499999999999e-54 3770163000.0 1060105.0 1116145.0 801128.0 761508.0 826807.0 996940.0 833412.0 1039623.0 1281248.0 1113399.0 True False 1001298.8623830742 1062523.7188321997 852769.992730122 833881.491364272 891872.0070116859 990717.7276638829 917661.4182772967 1036016.7904628334 1048605.6608336887 1103535.1510713142 0.9073556573263762 0.9628363154546544 0.7727619658533315 0.7556456090725684 0.8081953766002421 0.8977672588880309 0.8315651906388565 0.9388163027313322 0.950224068364021 1.0 20.07370115405596 -7.535635914338989 1.414806042289991 0.9933689662789272 0.8438274678906508 0.4357994835176169 0.06061373968039068 0.4398310581167244 1.5742435610874617 0.06099568920622315 0.02018734391774238 2.913158306589374e-08 7.535635914338989 -0.14954149838827646 AASGEDSTEEALAAAAAPWEGGPVPGVDT(ph)SPFAK ddPTM_KYSE-520_SHP099_60min_R1 2 AASGEDSTEEALAAAAAPWEGGPVPGVDTSPFAK 34 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0 A0A0A0MR88 FAM21C;FAM21D WASH complex subunit FAM21C;Putative WASH complex subunit FAM21 1 AASGEDSTEEALAAAAAPWEGGPVPGVDT(0.568)S(0.432)PFAK;AASGEDSTEEALAAAAAPWEGGPVPGVDT(0.556)S(0.444)PFAK 106.09 0.00073255 138557000.0 140947.0 198069.0 135765.0 116340.0 136795.0 176552.0 118716.0 165456.0 191009.0 168689.0 True False 133128.38893912133 188553.46793236985 144516.6291316806 127396.9186211035 147559.98824291944 175450.07347936073 130716.97183650763 164882.07175372087 156326.5805450483 167194.54669805616 0.7962483918781372 1.127748910811587 0.8643620978420391 0.7619681451164498 0.8825646000847407 1.049376770620477 0.7818255703792483 0.9861689571220795 0.9349980823678729 1.0 17.351168266951458 AASLTEDRDR ddPTM_KYSE-520_SHP099_60min_R1 1 AASLTEDRDR 10 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 114.86 0.0031223 0.0 421940.0 405320.0 337890.0 337390.0 386510.0 379670.0 313610.0 369650.0 425870.0 356260.0 False True 398534.14708346344 385847.8188022762 359670.9300431151 369455.44415999774 416926.138058926 377300.33869856445 345312.7593386501 368367.7704269588 348542.74330905726 353103.81356608553 1.128659991118661 1.0927319501466173 1.01859825984519 1.0463082809238817 1.1807466304265664 1.068525244426312 0.9779355137834633 1.0432279581087462 0.987082919861542 1.0 18.429732876908353 -6.624180193776819 5.901118472321949 1.006312781775069 1.090120630846714 0.4896317096568391 0.04401351431680512 0.2087041539664415 10.368620124960476 0.017943915425315905 0.013794054424338606 2.3758543128060271e-07 6.624180193776819 0.08380784907164496 AASPS(ph)PQS(ph)VRR ddPTM_KYSE-520_SHP099_60min_R1 1 AASPSPQSVRR 11 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 AAS(0.371)PS(0.632)PQS(0.997)VRR 69.352 0.056939 0.0 160600.0 166330.0 159840.0 125800.0 143470.0 142290.0 105110.0 102160.0 187070.0 119600.0 True False 151691.1978518372 158339.25713358 170143.54215304245 137755.99417685097 154760.2727673647 141401.9153302043 115735.54457474411 101805.63080432318 153102.80365093888 118540.43704739201 1.2796578250440536 1.335740453447768 1.4353206921703834 1.1621012846593155 1.3055483565113912 1.1928580563075903 0.9763380957375202 0.8588261806696535 1.2915660466961916 1.0 16.855019756145094 -6.560251095520371 3.3552478008626876 1.020836645591685 1.3032224686851996 0.534344436197183 0.11916586045287544 0.18658370834148363 4.372421249198845 0.047501336890870126 0.03694428361308598 2.7526367544799094e-07 6.560251095520371 0.28238582309351457 AASPS(ph)PQSVR ddPTM_KYSE-520_SHP099_60min_R1 2 AASPSPQSVR 10 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 AAS(0.268)PS(0.732)PQSVR;AAS(0.414)PS(0.575)PQS(0.011)VR 143.0 0.00021937 8188000000.0 4688050.0 4749490.0 4056250.0 3473350.0 3534950.0 4925720.0 4237260.0 4849970.0 5076030.0 4693680.0 True False 4427994.521104021 4521317.3712701695 4317722.365229472 3803456.1396992477 3813130.4538857993 4894976.754376944 4665603.592472466 4833146.586061508 4154350.908303174 4652097.646827784 0.9518275103540492 0.9718878911222355 0.9281237611539991 0.8175787415581837 0.8196583011291545 1.0522085145213529 1.0029031947886757 1.0389176997084701 0.8930059563852839 1.0 22.149449948404378 -6.271154020110275 24.941023116974804 1.0001829354037128 0.8991566101375016 0.3970717832985813 0.061302102612001357 760.042400667921 1951300.3804506285 0.02325297663521516 0.020751957013774212 5.356066739141912e-07 6.271154020110275 -0.10102632526621125 AASPYS(ph)QRPASPTAIR ddPTM_KYSE-520_SHP099_60min_R1 1 AASPYSQRPASPTAIR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 AASPYS(0.906)QRPAS(0.084)PT(0.01)AIR 186.77 6.9742e-12 2376800000.0 2002800.0 2149400.0 1832500.0 1640800.0 1711300.0 2346500.0 2208400.0 2543500.0 2884000.0 2095900.0 True False 1891700.691517181 2046139.5976848262 1950625.882103668 1796741.1386754925 1845969.5740349267 2331854.6231100196 2431646.623907005 2534677.19215736 2360338.299723676 2077331.9565855248 0.9106395756923401 0.9849844129139721 0.9390053794338573 0.8649273087912079 0.8886252234183676 1.1225238295293205 1.1705623726618355 1.2201599191318298 1.136235492955745 1.0 20.98630034585952 -6.308648173143447 5.662301819469225 1.1481909667129466 0.9195799301359506 0.7508798607630162 0.06073398494272618 0.09874006191806757 7.810809115076122 0.021568175735817888 0.019195609527625345 4.913057272882526e-07 6.308648173143447 -0.228611036576996 AASPYSQRPAS(ph)PTAIR ddPTM_KYSE-520_SHP099_60min_R1 5 AASPYSQRPASPTAIR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 AASPYSQRPAS(0.91)PT(0.09)AIR;AASPYS(0.006)QRPAS(0.629)PT(0.365)AIR;AASPYS(0.001)QRPAS(0.91)PT(0.09)AIR;AASPYSQRPAS(0.978)PT(0.022)AIR;AAS(0.044)PYS(0.005)QRPAS(0.948)PT(0.003)AIR 287.78 2.9065e-29 4909440000.0 2294370.0 2579150.0 2102320.0 2009730.0 2020050.0 2737300.0 2277380.0 2917740.0 3258640.0 2357310.0 True False 2167096.7223867956 2455243.7626169263 2237838.9110309337 2200734.134952645 2179016.4424877353 2720215.49535012 2507599.795486927 2907619.040945634 2666953.1196295233 2336426.067359431 0.9275263414758904 1.0508544639684576 0.9578042901909932 0.9419232928863263 0.9326280308755517 1.1642634592005037 1.073263062126743 1.2444729501891538 1.141466942561399 1.0 21.155871955364262 -6.2625727513727325 24.998854107418378 1.1367584578817398 0.9657106250423303 0.5889636165813064 0.06748775595173727 69.03965944665177 1522799.9892309268 0.02253202842027348 0.020985188920436788 5.462950289347262e-07 6.2625727513727325 -0.1710478328394095 AASS(ph)PDGFFWT(ph)QGSPKPGT(ph)ASPK ddPTM_KYSE-520_SHP099_60min_R1 1 AASSPDGFFWTQGSPKPGTASPK 23 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 3 AAS(0.477)S(0.523)PDGFFWT(0.5)QGS(0.5)PKPGT(0.59)AS(0.41)PK 67.283 0.019361 107050000.0 157000.0 143870.0 106860.0 129450.0 139360.0 143390.0 122560.0 133970.0 185060.0 148650.0 True False 148290.89702825918 136958.26924672723 113748.36658204513 141752.88907943823 150326.8391500658 142495.0498221803 134949.5608703324 133505.28933883295 151457.76898296206 147333.07664795002 1.0065010546314583 0.9295826325135854 0.7720490820526676 0.9621253577576097 1.020319690392873 0.9671626566427436 0.9159488415000807 0.9061460764702666 1.0279956981070038 1.0 17.168721829854633 -5.4800071867837 24.999138693527254 0.9674738219235557 0.8990129476553048 0.1870049228270112 0.06522083279895562 837.3664741048592 488282.1187743147 0.01902797500969242 0.02822087961502107 3.3112564191019188e-06 5.4800071867837 -0.06846087426825087 AASSDQLRDNS(ph)PPPAFKPEPPK ddPTM_KYSE-520_SHP099_60min_R1 4 AASSDQLRDNSPPPAFKPEPPK 22 2 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 AASSDQLRDNS(1)PPPAFKPEPPK;AAS(0.002)S(0.002)DQLRDNS(0.997)PPPAFKPEPPK;AAS(0.004)S(0.015)DQLRDNS(0.98)PPPAFKPEPPK;AASSDQLRDNS(1)PPPAFKPEPPK 173.07 7.165699999999999e-10 12096720000.0 3513580.0 4235440.0 4665000.0 2982490.0 3717420.0 3591770.0 2914840.0 3063110.0 5082270.0 3265240.0 True False 3318674.7132519195 4031963.1048749466 4965713.364263913 3265944.9528816803 4009959.8047735244 3569352.431130567 3209500.473296995 3052484.7863452495 4159457.8816007767 3236312.5139182773 1.025449396181435 1.245850976237569 1.5343738723958429 1.009156235325224 1.2390520963374376 1.1029072179463506 0.9917152498388295 0.9431984004071153 1.2852460520151765 1.0 21.62591949739821 -6.106048523599569 1.4325135519027001 1.0518477773053156 1.2394033927032349 0.16547754831856942 0.16071934670336482 0.6992181139603633 2.9121439972031125 0.06982324879593237 0.07163333746755572 7.833421152837165e-07 6.106048523599569 0.1875556153979192 AASSELPADISKPWIPSS(ph)PAPSSENGGPAS(ph)PGLPAEAS(ph)GSGPGS(ph)PHLHPPDK ddPTM_KYSE-520_SHP099_60min_R1 1 AASSELPADISKPWIPSSPAPSSENGGPASPGLPAEASGSGPGSPHLHPPDK 52 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 4 AASSELPADIS(0.001)KPWIPS(0.479)S(0.512)PAPS(0.004)S(0.004)ENGGPAS(0.999)PGLPAEAS(0.621)GS(0.566)GPGS(0.813)PHLHPPDK 96.965 8.0097e-06 555180000.0 132960.0 118350.0 100090.0 113840.0 108530.0 120180.0 123360.0 120990.0 191690.0 156190.0 True False 125584.4437508113 112664.28835302817 106541.96154966234 124659.31937275606 117070.69354877048 119429.91204149259 135830.4326775799 120570.31392927823 156883.92811166134 154806.2781139814 0.8112361157494239 0.7277759644222908 0.6882276536047021 0.8052601024421723 0.7562399598714801 0.7714797713407866 0.8774219904542251 0.7788464098368428 1.0134209673082524 1.0 17.240104455093842 -7.582855778064265 0.879905472479372 1.014841853159062 0.7535686627191829 0.71645327370248 0.055157429776938396 0.28812169095978457 0.44200560985196374 0.04962050714319543 0.019009072943648 2.613028953557466e-08 7.582855778064265 -0.26127319043987907 AASSELPADISKPWIPSS(ph)PAPSSENGGPAS(ph)PGLPAEASGS(ph)GPGS(ph)PHLHPPDK ddPTM_KYSE-520_SHP099_60min_R1 1 AASSELPADISKPWIPSSPAPSSENGGPASPGLPAEASGSGPGSPHLHPPDK 52 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 4 AASSELPADISKPWIPS(0.188)S(0.809)PAPS(0.001)S(0.001)ENGGPAS(1)PGLPAEAS(0.064)GS(0.937)GPGS(1)PHLHPPDK 157.02 4.3154000000000004e-10 399000000.0 166110.0 149210.0 131130.0 127510.0 129830.0 149730.0 147550.0 176910.0 207340.0 161730.0 True False 156895.54716792455 142041.72763122385 139582.84961541818 139628.5120627206 140046.88236834854 148795.47953047656 162465.7939492294 176296.34050110428 169692.2826160564 160297.1980240361 0.978779099709519 0.8861148503040278 0.8707753556271653 0.8710602167967011 0.8736701832264648 0.9282475387259427 1.013528595333701 1.0998092460397788 1.0586104105862881 1.0 17.29038968201188 -6.785572260419888 2.673271914597542 1.059407085450839 0.8932750504310253 0.7762759718445807 0.03779294404637716 0.11853046478706006 1.7303802289736308 0.017589496342826028 0.011644182696832232 1.638429427269339e-07 6.785572260419888 -0.16613203501981377 AASSELPADISKPWIPSSPAPSSENGGPAS(ph)PGLPAEASGS(ph)GPGS(ph)PHLHPPDK ddPTM_KYSE-520_SHP099_60min_R1 2 AASSELPADISKPWIPSSPAPSSENGGPASPGLPAEASGSGPGSPHLHPPDK 52 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 3 AASSELPADISKPWIPSSPAPSSENGGPAS(1)PGLPAEAS(0.285)GS(0.716)GPGS(0.999)PHLHPPDK;AASSELPADIS(0.003)KPWIPS(0.201)S(0.207)PAPS(0.075)S(0.076)ENGGPAS(0.524)PGLPAEAS(0.288)GS(0.784)GPGS(0.842)PHLHPPDK 175.0 2.0115e-13 5309800000.0 1107780.0 1067550.0 939990.0 1111530.0 962010.0 948080.0 875980.0 1004580.0 1126970.0 947700.0 True False 1046329.235095319 1016263.2955747824 1000583.2594371765 1217169.4770063208 1037714.7139118449 942162.68104758 964532.6071409419 1001095.3464507335 922340.6566017997 939304.1152994434 1.1139408611680113 1.081932122964036 1.065238875396812 1.2958204453499025 1.1047696874840465 1.003043280340814 1.0268587046842181 1.0657840524116 0.9819403977675155 1.0 19.841232804415018 -6.14968928561304 5.0280610661601735 1.0207827735131643 1.1373150504900107 0.4729653321001144 0.06209565874053852 0.2276650139099795 8.619075777071453 0.021701520013152852 0.021740729481352736 7.084524628162108e-07 6.14968928561304 0.11653227697684643 AASSLNLS(ph)NGETESVK ddPTM_KYSE-520_SHP099_60min_R1 4 AASSLNLSNGETESVK 16 0 O95819-3;E7EX83;G5E948;C9J840;H7C360;E7ENQ1;H7C0P6;G3XAA2;A0A0D9SG62;A0A0D9SEY1;O95819-4;O95819-2;O95819;O95819-5;O95819-6;E7EN19 O95819-3 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 AASSLNLS(0.999)NGET(0.001)ESVK;AASSLNLS(1)NGETESVK;AASSLNLS(1)NGETESVK;AASSLNLS(1)NGETESVK 419.09 1.9611999999999996e-101 2122370000.0 1817890.0 2083010.0 1544980.0 1423430.0 1426410.0 1979190.0 1588030.0 2153190.0 2313650.0 1928420.0 True False 1717048.0178261285 1982939.0729382446 1644571.8828554018 1558712.359230167 1538660.3518372935 1966837.1410667486 1748563.5700792593 2145721.0864483225 1893549.4823702076 1911335.6990880552 0.8983497868246662 1.037462479188953 0.8604306839662269 0.81550946805099 0.8050183714830554 1.0290380397358636 0.9148385450622524 1.122629105641724 0.9906943522656256 1.0 20.86614975887756 -6.281737280038415 24.78496146272598 1.0130667482348754 0.8868730530146576 0.4142871450619745 0.07607896052616031 822.1940351043238 1003945.3424782046 0.02858593411798844 0.02524281949221125 5.227123003765936e-07 6.281737280038415 -0.12619369522021784 AASSS(ph)SPGS(ph)PVASSPSR ddPTM_KYSE-520_SHP099_60min_R1 1 AASSSSPGSPVASSPSR 17 0 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 2 AASS(0.007)S(0.987)S(0.009)PGS(0.998)PVASSPSR 238.45 2.3209e-20 307850000.0 318930.0 313120.0 270550.0 322850.0 320930.0 343130.0 345650.0 361480.0 429200.0 324490.0 True False 301238.31712880725 298077.24519729824 287990.0858953053 353533.56693160796 346185.36515808443 340988.3983923889 380591.6752189162 360226.1102500665 351268.09925152565 321615.2710494002 0.9366418334113772 0.9268130963579571 0.8954490405745378 1.099243719920579 1.076395918727722 1.060236963499202 1.1833756338033377 1.120052878940365 1.092199689726707 1.0 18.29497638513331 -5.265973023285292 24.9751846729831 1.0972739978784867 0.9203524963428361 0.7508567860017695 0.044898920415351665 172.21913514257537 948730.950973761 0.012602783251833354 0.019420954962223045 5.4203455847276815e-06 5.265973023285292 -0.17692150153565056 AASSSSPGS(ph)PVASSPSR ddPTM_KYSE-520_SHP099_60min_R1 6 AASSSSPGSPVASSPSR 17 0 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AASSS(0.001)S(0.13)PGS(0.869)PVASSPSR;AASSSSPGS(1)PVASSPSR;AASSSSPGS(1)PVASSPSR;AASSSS(0.006)PGS(0.979)PVAS(0.015)SPSR;AASSSS(0.001)PGS(0.999)PVASSPSR;AASSSS(0.03)PGS(0.969)PVAS(0.001)SPSR 391.52 2.0901999999999997e-86 3338880000.0 1929850.0 2352540.0 1758570.0 1526610.0 1541150.0 2766880.0 2183460.0 2948270.0 3149890.0 2894030.0 True False 1822797.3734394044 2239520.4471654687 1871930.2360114865 1671698.5554079681 1662429.7370560006 2749610.875597979 2404185.4453160586 2938043.13950139 2577949.3782651206 2868391.1457212707 0.6354772696040565 0.7807583880274217 0.6526063360653628 0.5828000682199888 0.5795687033603553 0.9585899327919506 0.8381651327094425 1.0242825996322078 0.8987440161745733 1.0 21.45181033866217 -6.267682443689554 24.995033641095684 0.9388620620176004 0.6505442805523346 0.8157838659758423 0.07070137085352325 226.6573264641538 907453.5322997274 0.02558684912712678 0.02312694416120182 5.399052571734085e-07 6.267682443689554 -0.28831778146526577 AASSSSPGSPVASS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 AASSSSPGSPVASSPSR 17 0 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 AASSSSPGSPVAS(0.015)S(0.984)PS(0.001)R 217.65 9.5022e-15 95716000.0 189740.0 235490.0 189650.0 161250.0 164150.0 226900.0 170690.0 207560.0 237640.0 237190.0 True False 179214.74396268724 224176.70692230362 201875.14245072877 176575.15151841982 177067.67111426016 225483.83293571847 187945.0109738664 206840.02280486838 194490.5664168978 235088.6811310276 0.7623282545993832 0.9535835831983669 0.8587191075278221 0.7511001834239946 0.7531952208944113 0.9591437233426146 0.7994643130824086 0.8798382882993216 0.8273072335137127 1.0 17.842845553328882 -6.255137517052835 24.98772490791685 0.8797852044267629 0.822232334366605 0.182843922124457 0.07871061080931008 1250.0522466954658 4956629.945107554 0.02670609695945016 0.02607516811158157 5.557282609904148e-07 6.255137517052835 -0.05755287006015786 AASVAAATTS(ph)PTPR ddPTM_KYSE-520_SHP099_60min_R1 5 AASVAAATTSPTPR 14 0 Q9Y2D9 Q9Y2D9 ZNF652 Zinc finger protein 652 1 AASVAAAT(0.006)T(0.186)S(0.806)PT(0.001)PR;AASVAAAT(0.001)T(0.05)S(0.947)PT(0.001)PR;AASVAAATT(0.001)S(0.997)PT(0.002)PR;AASVAAAT(0.003)T(0.064)S(0.929)PT(0.004)PR;AASVAAAT(0.001)T(0.097)S(0.899)PT(0.004)PR 184.02 1.2753e-10 1175080000.0 3084800.0 3300940.0 2721420.0 2331120.0 2569380.0 3456590.0 2756620.0 3243620.0 3518890.0 3565620.0 True False 2913679.9946036576 3142357.8875880474 2896847.0876259543 2552668.9439232154 2771575.588227587 3435016.1396530448 3035286.0516186003 3232368.639286597 2879948.279998138 3534031.380810383 0.8244635320514688 0.8891709068150602 0.8197004427735679 0.7223107745403967 0.784253247799979 0.971982353723573 0.8588735425780469 0.9146406160506101 0.8149187060522768 1.0 21.752883419835808 -6.243728238452364 24.85734863167124 0.9034224923761627 0.8083821536481244 0.40732852980626033 0.06234987885599949 890.619437207927 1249972.7858888314 0.021087360347218365 0.02104453584978608 5.705211665575884e-07 6.243728238452364 -0.0950403387280383 AAT(ph)KGS(ph)RK ddPTM_KYSE-520_SHP099_60min_R1 2 AATKGSRK 8 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 2 AAT(1)KGS(1)RK;AAT(1)KGS(1)RK 66.92 0.033901 2232200000.0 2202320.0 2230600.0 2016920.0 1675020.0 1897700.0 2047150.0 1785670.0 1836770.0 2459000.0 1887380.0 True False 2080152.9193839238 2123438.6278011403 2146933.890386099 1834213.3971868742 2047038.1935640043 2034372.9774982654 1966182.9500597797 1830398.6735753429 2012507.5863455308 1870659.2815594214 1.111989200753792 1.135128480495388 1.1476883639635163 0.9805170910962657 1.0942870322475557 1.0875165764031431 1.051064172637963 0.9784778508940888 1.0758279747597124 1.0 20.835115382009175 -3.3830899132612737 0.21537186242953427 0.9978460500222122 1.3201758572404134 0.39380582341042714 0.045713175450314184 19.258294708550146 0.5838852694398093 0.08327179319803253 1.7587564034550327 0.00041391397212388033 3.3830899132612737 0.32232980721820126 AAT(ph)PLPSLR ddPTM_KYSE-520_SHP099_60min_R1 4 AATPLPSLR 9 0 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 AAT(0.997)PLPS(0.003)LR;AAT(0.995)PLPS(0.005)LR;AAT(1)PLPSLR;AAT(1)PLPSLR 115.42 0.0040135 1341900000.0 2481450.0 2872070.0 2128230.0 2121340.0 2179240.0 2700840.0 2228660.0 2872900.0 3086500.0 2802050.0 True False 2343799.0218520625 2734091.4461350427 2265419.111088399 2322951.5157958735 2350733.7898205346 2683983.055734272 2453954.7024255474 2862934.5804399033 2526069.4043332604 2777226.0169619117 0.8439352820178505 0.9844684694139315 0.8157129082229349 0.8364286887737779 0.846432294477808 0.9664258649968861 0.8835992056238908 1.030861212934967 0.9095656561278369 1.0 21.405213161058334 -6.654767104789497 1.4352288523839465 0.9710700478618525 0.8697355772517487 0.3593714536298157 0.059257107631223084 0.48037843511017003 2.018103187175757 0.032936973110298855 0.021400767811119874 2.214281824349329e-07 6.654767104789497 -0.10133447061010381 AAT(ph)SPALFNR ddPTM_KYSE-520_SHP099_60min_R1 1 AATSPALFNR 10 0 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 AAT(0.947)S(0.053)PALFNR 136.86 0.0056603 0.0 504590.0 516600.0 384700.0 337290.0 348610.0 449100.0 403430.0 415630.0 502420.0 439230.0 True False 476599.38682477287 491781.76056759065 409498.37754176336 369345.9401900638 376043.62368042796 446297.0003148141 444212.6414973743 414188.27653877164 411193.1929775201 435338.7639157695 1.0947781964966175 1.1296530456974005 0.9406430382133262 0.8484104123140429 0.8637954045213071 1.025171745103693 1.0203838443004394 0.9514160255641968 0.9445361338350261 1.0 18.731778962329972 -4.763939444938987 24.999582185061357 0.9461516727740223 1.1122156585156637 0.5724603610197686 0.05626627952190825 45.555232020207065 455553.31207192113 0.01638550676214781 0.03686336549432153 1.722108677337056e-05 4.763939444938987 0.16606398574164138 AATAARPPAPPPAPQPPS(ph)PT(ph)PSPPRPTLAR ddPTM_KYSE-520_SHP099_60min_R1 1 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36;Q96B36-3;H9KV91 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 2 AATAARPPAPPPAPQPPS(0.996)PT(0.584)PS(0.41)PPRPT(0.01)LAR 77.433 0.0014412000000000001 0.0 91395.0 110210.0 107150.0 96705.0 114630.0 94118.0 90627.0 90198.0 115390.0 99543.0 True False 86325.13715858437 104915.34617141746 114057.06044606175 105895.81412458153 123650.72884451816 93530.57465070047 99788.46159428537 89885.1241903714 94438.08474518545 98661.1264632821 0.8749660606268396 1.0633909213520174 1.156048633688664 1.0733286545637801 1.253287219364318 0.9479982441261602 1.0114263354921538 0.9110490363580351 0.9571964980587536 1.0 16.59019413894463 AATAARPPAPPPAPQPPS(ph)PTPS(ph)PPRPTLAR ddPTM_KYSE-520_SHP099_60min_R1 5 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36;Q96B36-3;H9KV91 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 2 AATAARPPAPPPAPQPPS(0.89)PT(0.335)PS(0.761)PPRPT(0.014)LAR;AATAARPPAPPPAPQPPS(0.953)PT(0.053)PS(0.983)PPRPT(0.01)LAR;AATAARPPAPPPAPQPPS(0.939)PT(0.333)PS(0.521)PPRPT(0.206)LAR;AATAARPPAPPPAPQPPS(0.854)PT(0.166)PS(0.978)PPRPT(0.002)LAR;AATAARPPAPPPAPQPPS(0.962)PT(0.039)PS(0.998)PPRPTLAR 160.63 3.4582e-10 89677000000.0 6813360.0 6259860.0 5692410.0 5381590.0 6072270.0 6032140.0 4840930.0 5605680.0 7226980.0 5742020.0 True False 6435409.338703577 5959126.929358579 6059351.8567780275 5893054.695565971 6550123.102509831 5994491.176751275 5330298.447323908 5586235.204455541 5914742.6093401555 5691150.170023968 1.130774825201366 1.0470865732459633 1.0646972361919784 1.0354769281270173 1.150931341964966 1.053300474889073 0.9365942363284115 0.9815652438550949 1.0392877419566044 1.0 22.44028881709388 -6.56814308357547 8.201509726352903 0.988466904648862 1.081900530624682 0.559586699613484 0.04034206465892317 0.19854093575887394 31.916865748730075 0.015440795204592957 0.011967153648254096 2.7030676590212943e-07 6.56814308357547 0.09343362597582006 AATAARPPAPPPAPQPPS(ph)PTPSPPRPTLAR ddPTM_KYSE-520_SHP099_60min_R1 2 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36;Q96B36-3;H9KV91 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 1 AATAARPPAPPPAPQPPS(0.935)PT(0.053)PS(0.012)PPRPTLAR;AATAARPPAPPPAPQPPS(0.949)PT(0.049)PS(0.003)PPRPTLAR 117.94 0.00016295 1191200000.0 348240.0 395300.0 340580.0 329120.0 336420.0 388710.0 285190.0 386090.0 455860.0 402950.0 True False 328922.433000771 376309.1946426036 362534.33174726675 360399.46584646404 362894.34003204067 386283.9167053462 314019.78838617913 384750.7439040838 373087.3152954343 399380.1764903562 0.8235822716371438 0.9422330320686066 0.9077424296146076 0.9023969817770026 0.9086438471259562 0.9672085382401892 0.7862678391944717 0.9633696576659566 0.9341658331017418 1.0 18.60740319983558 -7.880920701477361 1.7912072782785444 0.9942713516808992 0.8984484488926991 0.2643727639945985 0.05325933011122816 0.44520221642701996 3.0723619855825124 0.04809491121431636 0.013915771802811725 1.3154650031195402e-08 7.880920701477361 -0.09582290278820005 AATAARPPAPPPAPQPPSPT(ph)PS(ph)PPRPTLAR ddPTM_KYSE-520_SHP099_60min_R1 1 AATAARPPAPPPAPQPPSPTPSPPRPTLAR 30 2 Q96B36;Q96B36-3;H9KV91 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 2 AATAARPPAPPPAPQPPS(0.004)PT(0.996)PS(0.975)PPRPT(0.025)LAR 141.36 1.7675999999999998e-07 2191300000.0 551490.0 513480.0 489260.0 469860.0 497810.0 522580.0 471910.0 500500.0 548820.0 504910.0 True False 520897.7503319405 488811.65005080705 520798.48244367866 514515.35313143994 536984.8148485525 519318.3843787919 519615.2681977689 498763.8823175785 449168.12262633396 500436.89021403546 1.0408859948537246 0.9767698177521319 1.0406876324024286 1.0281323443429264 1.0730320353059615 1.037730020575983 1.0383232698443372 0.9966569053377711 0.8975519818977095 1.0 18.932828617591955 -7.539842178529686 6.442848107047075 0.9473821352059145 1.032234348912599 0.5285021355300238 0.03199178542069827 0.11711055350373102 19.55644318755088 0.020860323622604027 0.008082005888347397 2.8850797430274003e-08 7.539842178529686 0.08485221370668439 AATEALGEKS(ph)PDSATVSGYDIMK ddPTM_KYSE-520_SHP099_60min_R1 6 AATEALGEKSPDSATVSGYDIMK 23 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 AATEALGEKS(1)PDSATVSGYDIMK;AATEALGEKS(0.999)PDS(0.001)ATVSGYDIMK;AATEALGEKS(0.998)PDS(0.002)ATVSGYDIMK;AATEALGEKS(0.998)PDS(0.002)ATVSGYDIMK;AATEALGEKS(0.989)PDS(0.008)AT(0.003)VSGYDIMK;AATEALGEKS(0.872)PDS(0.115)AT(0.012)VSGYDIMK 312.52 8.295399999999999e-61 25784500000.0 11650180.0 11676930.0 10270730.0 8481300.0 8692710.0 10964510.0 9661240.0 10475280.0 13985500.0 11129530.0 True False 11003921.29134195 11115952.755370738 10932797.68954903 9287360.202004163 9376776.822245749 10896076.42601152 10637892.423816027 10438943.698628737 11446085.745764708 11030931.022843303 0.9975514549546706 1.007707575394259 0.9911038031974768 0.8419380179942669 0.8500440083278498 0.9877748671845993 0.9643694083288749 0.9463338749024307 1.0376355107344688 1.0 23.395051225345217 -7.752190009329635 24.485614027831186 1.0188177515452301 0.9467802117247458 0.20201991462115154 0.05594870983089299 235.03726489562578 622223.1252541557 0.043549535803164736 0.01593431310534864 1.7693346826464214e-08 7.752190009329635 -0.07203753982048433 AATS(ph)PALFNR ddPTM_KYSE-520_SHP099_60min_R1 1 AATSPALFNR 10 0 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 AAT(0.021)S(0.979)PALFNR 117.8 0.00055921 328690000.0 502170.0 513590.0 449330.0 388060.0 375450.0 454880.0 372170.0 405760.0 523620.0 419140.0 True False 474313.62904892385 488916.3654856933 478294.5307534193 424941.1057255063 404995.7789817176 452040.9251908311 409792.5756291741 404352.5132650958 428543.8073860303 415426.7456859853 1.1417503422070234 1.1769015128728801 1.1513330225371545 1.022902617942449 0.9748909601690587 1.0881363077487598 0.9864376328310119 0.9733425145687169 1.0315749090212887 1.0 18.664234576094593 -5.26775428662759 4.527579702778895 1.0096781682443117 1.160573368739265 0.8107280258338908 0.032309342257840296 0.07865330201328803 4.371546946103428 0.00912822424974568 0.014947166332355847 5.398159510149015e-06 5.26775428662759 0.1508952004949533 AATTATPAATTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 AATTATPAATTSPK 14 0 Q92766-5;Q92766-3;Q92766;Q92766-2;A0A087X055 Q92766-5 RREB1 Ras-responsive element-binding protein 1 1 AATTATPAATT(0.001)S(0.999)PK;AATTATPAATTS(1)PK;AATTATPAATT(0.002)S(0.998)PK;AATTATPAATT(0.002)S(0.998)PK;AATTATPAATTS(1)PK;AATTATPAAT(0.028)T(0.308)S(0.665)PK 314.55 1.6194000000000002e-42 4717860000.0 5833040.0 7919960.0 5185120.0 4284950.0 4616240.0 6828620.0 5678940.0 7602050.0 7689570.0 7975470.0 True False 5509469.643323044 7539473.23349768 5519361.131685337 4692190.359682811 4979511.825187279 6786000.049632026 6253022.676313364 7575680.2628818145 6293337.926285087 7904813.540621766 0.6969765466333426 0.9537825522073795 0.6982278713244896 0.5935864692532317 0.6299341280598514 0.8584642780958325 0.7910398700968628 0.9583629296189493 0.7961399587661968 1.0 22.91430000190239 -6.747733067014062 1.781622506170487 0.9017651158823471 0.7247557750218637 0.3626399774986052 0.1084950166647387 0.45265255104156793 2.939620251133839 0.06074474217552305 0.038184356527153254 1.7875859517922935e-07 6.747733067014062 -0.17700934086048337 AAVEWFDGKDFQGSK ddPTM_KYSE-520_SHP099_60min_R1 2 AAVEWFDGKDFQGSK 15 1 H7BY36;A0A0D9SFL3;B0QYK0;C9JGE3;Q01844-2;Q01844-6;Q01844-3;Q01844;Q01844-5 H7BY36 EWSR1 RNA-binding protein EWS 0 ; 156.17 1.7662000000000001e-06 1109360000.0 1078870.0 1102000.0 738030.0 703350.0 1238530.0 1113030.0 851450.0 870550.0 1051610.0 985140.0 False True 1019022.9304259745 1049058.265864276 785604.5946897526 770196.1725301114 1335995.2647282637 1106083.1669124837 937522.8753512132 867530.2652378979 860664.1329307959 976412.4260273215 1.0436398628927943 1.074400773587576 0.8045827498182312 0.7888021004236586 1.368269420908497 1.1328032473047756 0.9601709793531241 0.8884875305894797 0.8814555304591272 1.0 19.897131129709425 -6.991412010728253 24.353165803284377 0.9158487444024218 1.0319384997120031 0.09654022852987298 0.15654106849028104 367.52372962459424 1042191.103336035 0.07190515891811865 0.04838373021927341 1.0199713881566321e-07 6.991412010728253 0.11608975530958132 AAVGQES(ph)PGGLEAGNAK ddPTM_KYSE-520_SHP099_60min_R1 4 AAVGQESPGGLEAGNAK 17 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK;AAVGQES(1)PGGLEAGNAK 340.33 7.691199999999999e-59 4424580000.0 4533750.0 5757680.0 4002830.0 3304550.0 3623420.0 5325130.0 3859710.0 4932240.0 5724790.0 5215500.0 True False 4282253.849693446 5481072.410346129 4260858.826554447 3618613.4384508114 3908562.539560359 5291893.888413321 4249887.153939545 4915131.210633475 4685312.446211892 5169294.727597599 0.8284019533325391 1.0603133888040908 0.8242630863755486 0.7000207241293325 0.756111374090067 1.0237168061169342 0.8221406164462703 0.9508320708418487 0.9063736337566818 1.0 22.301536029283135 -6.257153107653209 24.993755751978625 0.9301351279225285 0.8384404918992899 0.21490248452865623 0.10087710155510343 764.4187831765262 4457425.835918904 0.0365056800612455 0.0352829011781621 5.531550636699278e-07 6.257153107653209 -0.09169463602323857 AAVHLEGK ddPTM_KYSE-520_SHP099_60min_R1 2 AAVHLEGK 8 0 P18206-2;P18206 P18206-2 VCL Vinculin 0 ; 95.90899999999999 0.0036414999999999998 499390000.0 3212300.0 3031000.0 2106260.0 1951800.0 3024300.0 3182700.0 2237460.0 2833700.0 2831200.0 2775400.0 False True 3034107.3154387074 2885386.2103762487 2242032.8897351557 2137298.4851699322 3262295.204086855 3162835.5887373807 2463644.292305269 2823870.5560905524 2317125.4487439888 2750812.115228527 1.1029860231608895 1.048921587338778 0.8150439927624413 0.7769699985461833 1.1859389400049358 1.1497824846807554 0.8956061661450835 1.0265588625473812 0.8423423162622979 1.0 21.39142617401473 -8.001278907816802 0.0036634332878816675 9.015821909345509e-06 1.9542712599923948 0.005692075555606135 0.1367183466233115 168876.879839573 410.26885700094977 109946.98106063005 108890.29136539079 9.970595375788022e-09 8.001278907816802 1.9542622441704856 AAVLS(ph)DS(ph)EDEEK ddPTM_KYSE-520_SHP099_60min_R1 2 AAVLSDSEDEEK 12 0 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 AAVLS(1)DS(1)EDEEK;AAVLS(1)DS(1)EDEEK 162.88 1.6230999999999998e-05 604130000.0 3139300.0 3102200.0 2933900.0 3370700.0 3035400.0 2969900.0 3108100.0 3330900.0 3992700.0 2738900.0 True False 2965156.7709606034 2953165.655502868 3123023.888405972 3691050.3145620883 3274268.7109364974 2951363.7524715327 3422297.080132836 3319345.8853379004 3267726.3277762528 2714635.476831953 1.0922854269999502 1.0878682168219822 1.1504395028575323 1.3596854332978936 1.2061541002026726 1.0872044433442118 1.260683841105157 1.2227593404959325 1.2037440590696804 1.0 21.37232705425102 -5.000263051055157 18.20222603471002 1.2041391016129592 1.0973438995512503 0.15331515374791316 0.09121664449604006 0.47625366234207844 33101.49342532983 0.023411998412022548 0.04723614357472612 9.99394485959363e-06 5.000263051055157 -0.1067952020617089 AAVLS(ph)DS(ph)EDEEKASAK ddPTM_KYSE-520_SHP099_60min_R1 9 AAVLSDSEDEEKASAK 16 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 AAVLS(1)DS(1)EDEEKASAK;AAVLS(1)DS(0.998)EDEEKAS(0.002)AK;AAVLS(1)DS(1)EDEEKASAK;AAVLS(1)DS(1)EDEEKASAK;AAVLS(1)DS(1)EDEEKASAK;AAVLS(1)DS(1)EDEEKASAK;AAVLS(0.998)DS(0.994)EDEEKAS(0.008)AK;AAVLS(1)DS(0.996)EDEEKAS(0.004)AK;AAVLS(0.999)DS(0.656)EDEEKAS(0.345)AK 229.02 4.503999999999999e-18 10001000000.0 22035080.0 19378440.0 18109530.0 18189650.0 19674230.0 19341950.0 18535720.0 20000110.0 23111760.0 18681890.0 True False 20812750.18655704 18447470.654768534 19276899.280072488 19918388.86708231 21222479.969944034 19221229.715517946 20409491.468794387 19930734.28647077 18915246.984057445 18516382.988890484 1.1240181302711407 0.9962783047767323 1.0410726161604187 1.0757170490064396 1.1461460903394125 1.0380661129687347 1.1022396480478793 1.0763837785397328 1.021541139833102 1.0 24.142298972657084 -7.870788754902133 3.783356913858738 1.0011969628786888 1.0733676973847814 0.2849413791970087 0.041211672162342804 0.28980381650189047 7.24955606910508 0.039856166919049155 0.010617553140946881 1.3465151529769154e-08 7.870788754902133 0.07217073450609268 AAVLS(ph)DS(ph)EDEEKASAKK ddPTM_KYSE-520_SHP099_60min_R1 1 AAVLSDSEDEEKASAKK 17 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 AAVLS(1)DS(0.913)EDEEKAS(0.088)AKK 122.77 6.787899999999999e-05 2754100000.0 3463800.0 3596300.0 3257900.0 2797400.0 2706400.0 2918200.0 2523500.0 2548400.0 3984000.0 2568800.0 True False 3271656.109085892 3423528.3498436487 3467909.4468243076 3063264.05493102 2919378.2826904273 2899986.431348672 2778600.00698665 2539560.195201029 3260606.028467097 2546042.4304961576 1.284996695223312 1.3446470132771873 1.36207841836654 1.2031472917495996 1.1466337904358948 1.139017322183252 1.091340809448008 0.9974539955746671 1.2806565944903319 1.0 21.279825031672758 -5.570668727384996 1.8896573368885732 1.1038057039290934 1.3337976725781362 0.6198659235513746 0.07751869565681277 0.21739593895703024 1.572752998911805 0.02472873693631439 0.03776422870025635 2.687393563201778e-06 5.570668727384996 0.2299919686490428 AAVPS(ph)GASTGIYEALELR ddPTM_KYSE-520_SHP099_60min_R1 2 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798;P13929-3;P09104-2;F5H1C3;P13929-2;E5RI09;E5RG95;K7EKN2;P09104;K7EPM1;E5RGZ4;F5H0C8;P13929 P06733 ENO1;ENO3;ENO2 Alpha-enolase;Enolase;Beta-enolase;Gamma-enolase 1 AAVPS(0.961)GAS(0.016)T(0.016)GIY(0.007)EALELR;AAVPS(0.498)GAS(0.498)T(0.004)GIYEALELR 66.24600000000001 0.019655000000000002 269756000.0 50211.0 60303.0 46809.0 31774.0 40891.0 44818.0 27467.0 43606.0 51036.0 46990.0 True False 47425.69573685303 57405.95336335164 49826.38303704808 34793.79140679855 44108.889062036025 44538.27423760704 30243.632412087303 43454.74096371693 41769.148912863195 46573.70515766681 1.0182933819910174 1.2325829170991276 1.0698393625409428 0.7470694308947612 0.9470770880846479 0.9562965644848485 0.6493714062409891 0.9330316498678559 0.8968397247215212 1.0 15.507228039460742 -5.096349234456409 5.855230317257746 0.8705997957964506 1.131604812569974 0.4826305037859595 0.11046410225991625 0.17307885366971118 8.521380217726914 0.02930597593407765 0.05192067400170708 8.010336594745792e-06 5.096349234456409 0.2610050167735234 AAVPSGAS(ph)TGIYEALELR ddPTM_KYSE-520_SHP099_60min_R1 3 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798;P13929-3;P09104-2;F5H1C3;P13929-2;E5RI09;E5RG95;K7EKN2;P09104;K7EPM1;E5RGZ4;F5H0C8;P13929 P06733 ENO1;ENO3;ENO2 Alpha-enolase;Enolase;Beta-enolase;Gamma-enolase 1 AAVPSGAS(0.972)T(0.028)GIYEALELR;AAVPS(0.003)GAS(0.975)T(0.022)GIYEALELR;AAVPS(0.001)GAS(0.971)T(0.028)GIYEALELR 195.46 1.2161e-12 404216000.0 87203.0 119757.0 88972.0 67128.0 70024.0 101180.0 67590.0 89988.0 114487.0 87539.0 True False 82365.67575512934 114003.69396107836 94707.27748023333 73507.82493723078 75534.4904179407 100548.4980891847 74422.65681483166 89675.8526313572 93699.0467824079 86763.47256431133 0.9493128078071998 1.3139595568466427 1.0915570191134736 0.847220872617159 0.8705793830687514 1.158880518695878 0.8577648475246038 1.0335668914690699 1.0799365679255835 1.0 16.404800175195117 -5.012029626198696 24.642448942559252 0.9770544816336724 1.1494167036989855 0.20951429485139428 0.1252618177401514 622.1166215178299 1274403.1665331845 0.03260141877623777 0.06074196546908191 9.726808682951629e-06 5.012029626198696 0.17236222206531315 AAVPSGASTGIY(ph)EALELR ddPTM_KYSE-520_SHP099_60min_R1 6 AAVPSGASTGIYEALELR 18 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798;P13929-3;P09104-2;F5H1C3;P13929-2;E5RI09;E5RG95;K7EKN2;P09104;K7EPM1;E5RGZ4;F5H0C8;P13929 P06733 ENO1;ENO3;ENO2 Alpha-enolase;Enolase;Beta-enolase;Gamma-enolase 1 AAVPSGAS(0.011)T(0.34)GIY(0.648)EALELR;AAVPSGAST(0.045)GIY(0.955)EALELR;AAVPSGAST(0.001)GIY(0.999)EALELR;AAVPSGAST(0.007)GIY(0.993)EALELR;AAVPSGAS(0.007)T(0.229)GIY(0.764)EALELR;AAVPSGAST(0.005)GIY(0.995)EALELR 255.08 5.7615e-28 743472000.0 289471.0 313038.0 266618.0 215362.0 231249.0 282596.0 240320.0 289581.0 348024.0 277259.0 True False 273413.46658386756 297999.18460038217 283804.622883883 235829.93972905385 249446.98067317408 280832.2135403365 264613.89089717926 288576.51109971374 284831.61457109253 274802.7009642378 0.9949446116231914 1.0844114106402583 1.0327577636175298 0.8581791186970328 0.9077311824007019 1.0219412420436267 0.9629231807718495 1.0501225427812242 1.0364949600992455 1.0 18.068036658536645 -9.143203665862002 12.821365454913703 0.999999999999971 0.9931348376169588 0.0003347954715987589 0.06502441589899673 0.0 0.0 0.06899342558637594 0.01673336359798942 7.191116657646614e-10 9.143203665862002 -0.006865162383012269 AAVS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 1 AAVSPQK 7 0 E9PJF5;G5E9I4;Q9HCU9 E9PJF5 BRMS1 Breast cancer metastasis-suppressor 1 1 AAVS(1)PQK 65.465 0.047827 160210000.0 645810.0 499790.0 530370.0 461600.0 542890.0 726370.0 704470.0 495500.0 695920.0 640870.0 True False 609985.6319096816 475779.33819991513 564558.4988220043 505470.32521489944 585612.3543784382 721836.45539673 775684.702564646 493781.22615056986 569558.4707155678 635192.3903893153 0.9603163405906291 0.749031860895414 0.8887992163696753 0.7957751586178354 0.9219448520463398 1.1364060185832985 1.221180723039238 0.7773727041155621 0.8966708029459864 1.0 19.276834103521338 -6.003516565128731 16.1481720937037 1.008433768701874 0.8460792737815731 0.2644087605391886 0.12426313762876044 2.233338389260051 10260.12990544773 0.04194160728555204 0.04596216537062309 9.91935503500043e-07 6.003516565128731 -0.16235449492030096 AAVS(ph)PQKR ddPTM_KYSE-520_SHP099_60min_R1 10 AAVSPQKR 8 1 E9PJF5;G5E9I4;Q9HCU9 E9PJF5 BRMS1 Breast cancer metastasis-suppressor 1 1 AAVS(1)PQKR;AAVS(1)PQKR;AAVS(1)PQKR;AAVS(1)PQKR;AAVS(1)PQKR;AAVS(1)PQKR;AAVS(1)PQKR;AAVS(1)PQKR;AAVS(1)PQKR;AAVS(1)PQKR 123.96 0.00058347 50595280000.0 30702290.0 27049930.0 25313480.0 22645970.0 24505710.0 26287570.0 23196790.0 24131240.0 29477160.0 24441830.0 True False 28999172.77020228 25750410.760027323 26945227.423800044 24798236.180040866 26434169.95858322 26123499.52475103 25541747.912053872 24047534.36071376 24124850.802733243 24225294.401655998 1.1970617276882276 1.0629555345369537 1.1122765724555288 1.0236505599843486 1.0911805454375088 1.0783563283740847 1.0543421057581817 0.992662213387587 0.9958537717949926 1.0 24.530010862534176 -1.0000000000000004 0.221970666762838 0.992096887774446 1.8833679677819861 0.6611177649112333 0.03513716147221517 33.56255866476211 0.43089316565957975 0.05554252992838505 10.749768314815856 0.0999999999999999 1.0000000000000004 0.8912710800075401 AAVT(ph)PGKK ddPTM_KYSE-520_SHP099_60min_R1 9 AAVTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AAVT(1)PGKK;AAVT(1)PGKK;AAVT(1)PGKK;AAVT(1)PGKK;AAVT(1)PGKK;AAVT(1)PGKK;AAVT(1)PGKK;AAVT(1)PGKK;AAVT(1)PGKK 128.03 0.00098662 41046570000.0 46156600.0 45428200.0 32621500.0 35978100.0 36340000.0 49849000.0 45701700.0 35106800.0 48046200.0 70849600.0 True False 43596201.38709907 43245761.08288161 34724334.08624549 39397447.80678976 39199751.25368397 49537873.900452375 50321673.84160963 34985022.70478868 39322221.226138584 70221927.6641548 0.6208345859658452 0.6158441176623618 0.494494173562409 0.5610419582215546 0.558226647396547 0.7054473659192823 0.7166091207618134 0.4982065270567471 0.5599706891300685 1.0 26.06541826443683 -10.420939393970356 3.5158745766542374 1.003749261037302 0.5924086901586286 0.7449205089142199 0.07157272386578763 54049205.60433615 68420811.99568294 1981745.906410002 0.019321581760739674 3.7936792227844744e-11 10.420939393970356 -0.4113405708786734 AAVTPGKK ddPTM_KYSE-520_SHP099_60min_R1 1 AAVTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 69.954 0.056421000000000006 414570000.0 169080.0 246990.0 184520.0 182250.0 181140.0 218620.0 167910.0 175510.0 235500.0 231340.0 False True 159700.79534737635 235124.22966045182 196414.45444243867 199570.9852045396 195394.68745438394 217255.5114870287 184883.98144368097 174901.19677434175 192739.13647188817 229290.50757979657 0.6964998116714363 1.0254424927670633 0.8566183420134977 0.8703848550515589 0.8521708531103653 0.9475120177463976 0.8063307260085267 0.7627930114528334 0.8405892529363085 1.0 17.80681710431835 -6.810305001432324 24.99913613380563 0.8326610235412875 0.8795689839530536 0.0 0.09716555701492265 393.2613350469111 201184.48131749377 0.03832399926673689 0.02583807607780715 1.5477292796359636e-07 6.810305001432324 0.04690796041176615 AAVVT(ph)SPPPTTAPHK ddPTM_KYSE-520_SHP099_60min_R1 8 AAVVTSPPPTTAPHK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;P35611-5;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 ADD1 Alpha-adducin 1 AAVVT(0.5)S(0.5)PPPTTAPHK;AAVVT(0.5)S(0.5)PPPTTAPHK;AAVVT(0.5)S(0.5)PPPTTAPHK;AAVVT(0.5)S(0.5)PPPTTAPHK;AAVVT(0.5)S(0.5)PPPTTAPHK;AAVVT(0.655)S(0.332)PPPT(0.01)T(0.002)APHK;AAVVT(0.5)S(0.5)PPPTTAPHK;AAVVT(0.544)S(0.454)PPPT(0.001)T(0.001)APHK 211.13 2.2341999999999997e-13 84789990000.0 24419750.0 26232790.0 21491570.0 20365310.0 20946580.0 33660550.0 29521100.0 39258900.0 44048430.0 38020940.0 True False 23065137.787935227 24972527.392179444 22876950.989927843 22300822.939346287 22594956.67626282 33450462.02170293 32505380.8861714 39122720.03899609 36050345.482557975 37684104.051443756 0.612065441610295 0.6626806718845872 0.6070716437545602 0.591783286366653 0.5995885332823021 0.8876544331805966 0.8625753936407055 1.0381756717789665 0.956645949001322 1.0 25.16745275687564 -6.445595889382781 1.8996508080948522 0.9777266126293939 0.611526072960109 0.925132586869096 0.04774455386742077 0.08561773986189239 0.6147891481693243 0.021055388447346297 0.016925056561180842 3.584298005821851e-07 6.445595889382781 -0.3662005396692849 AAVVTS(ph)PPPTTAPHK ddPTM_KYSE-520_SHP099_60min_R1 8 AAVVTSPPPTTAPHK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;P35611-5;A0A0A0MSR2;D6RJE2;D6RAH3;D6RF25 P35611 ADD1 Alpha-adducin 1 AAVVT(0.029)S(0.965)PPPT(0.003)T(0.004)APHK;AAVVT(0.133)S(0.867)PPPTTAPHK;AAVVT(0.189)S(0.81)PPPTTAPHK;AAVVT(0.104)S(0.896)PPPTTAPHK;AAVVT(0.035)S(0.946)PPPT(0.015)T(0.004)APHK;AAVVT(0.015)S(0.973)PPPT(0.012)T(0.001)APHK;AAVVT(0.003)S(0.996)PPPT(0.001)TAPHK;AAVVT(0.376)S(0.624)PPPTTAPHK 207.31 1.1449e-12 58564100000.0 14160760.0 14733950.0 13051130.0 12212160.0 12321760.0 18759080.0 16466600.0 21909490.0 24383220.0 20869020.0 True False 13375234.414024802 14026108.92589017 13892426.722346336 13372800.014680209 13291412.410775788 18641997.623392586 18131204.626529202 21833491.09290341 19955841.898955718 20684136.718651865 0.6466421391405579 0.6781094670120877 0.6716464366539832 0.6465244451135986 0.6425896614186607 0.9012702766841709 0.8765753617447054 1.0555669491980837 0.9647896922360115 1.0 24.30202141014766 -6.481074175975193 1.691311940876289 0.9935453465462759 0.6540382399199598 0.9212027019317819 0.04447898594045249 0.09095827430898615 0.5225114746930037 0.02026002876211159 0.015650036468426727 3.3031311989564124e-07 6.481074175975193 -0.3395071066263161 AAYEHFHR ddPTM_KYSE-520_SHP099_60min_R1 1 AAYEHFHR 8 0 K7EKI8;O60437;K7EQ71 K7EKI8 PPL Periplakin 0 128.1 0.0014184 318800000.0 285700.0 223860.0 151270.0 155220.0 274010.0 247890.0 186580.0 212470.0 200940.0 169510.0 False True 269851.6514711702 213105.42957928946 161021.1062405576 169972.06213140537 295573.02809636545 246342.8265598732 205441.32724532177 211732.99116087085 164454.3612851853 168008.27327678434 1.6061807326988267 1.2684222355419965 0.9584117680638514 1.0116886437573571 1.7592766256779822 1.4662541418661985 1.222804825253269 1.2602533615237652 0.978846803658626 1.0 17.358172752211708 -7.691069965491319 2.8963897554138565 0.9768348920444856 1.3185181046641794 0.24670256153599457 0.23157786340642048 0.4276304271795125 6.683393471391669 0.22271235572780207 0.06632467601564586 2.0367139336098294e-08 7.691069965491319 0.3416832126196938 AAYLQETGKPLDETLKK ddPTM_KYSE-520_SHP099_60min_R1 2 AAYLQETGKPLDETLKK 17 2 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 0 ; 159.95 3.233e-08 1806460000.0 2011490.0 1550740.0 1313190.0 1112660.0 1889770.0 1590580.0 1238520.0 1413450.0 1525250.0 1221840.0 False True 1899908.639894096 1476240.1226918048 1397840.3285782896 1218406.8718665733 2038484.1476795347 1580652.6002243068 1363721.6883903749 1408547.0718517092 1248303.048423555 1211015.4481771346 1.5688558248814324 1.2190101496342562 1.154271261099411 1.006103492486875 1.6832850074273922 1.3052290972865488 1.1260976814483246 1.163112389665967 1.0307903588699443 1.0 20.2077858380446 -6.81517980530874 4.159951350691656 1.0866754881950282 1.3130146505550089 0.29052301903370426 0.1863763953396167 0.34097187816385893 12.08000435800566 0.0841023890897525 0.05684284497136945 1.530453696612172e-07 6.81517980530874 0.22633916235998064 ACEVALEEIKAETEKQS(ph)PPHGEAK ddPTM_KYSE-520_SHP099_60min_R1 1 ACEVALEEIKAETEKQSPPHGEAK 24 2 Q9Y6D6;E5RJN9 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 1 ACEVALEEIKAET(0.001)EKQS(0.999)PPHGEAK 148.22 4.5012e-07 1025300000.0 634530.0 590620.0 586060.0 463710.0 522600.0 637270.0 485370.0 566850.0 747280.0 450350.0 True False 599331.3559958047 562245.7286613061 623838.3653291542 507780.85898050433 563725.6468127471 633292.5615466953 534435.9363547099 564883.7296537844 611592.7893958068 446360.24936699827 1.3427077273250496 1.2596232067229323 1.3976118308336034 1.1376032245268461 1.2629387307946653 1.4187924718762333 1.1973197369448005 1.2655332334249503 1.370177542160467 1.0 18.767849028049714 -10.131967227217269 4.4548568400568165 0.9999604622978314 1.2910689867398426 0.5223641899530287 0.0844761945485639 55791094.14217391 1.6484960476627541 22628.116633509668 0.01990062683033679 7.379599160484441e-11 10.131967227217269 0.2911085244420112 ACFHCETCK ddPTM_KYSE-520_SHP099_60min_R1 2 ACFHCETCK 9 0 Q14847;Q14847-2;F6S2S5;K7ESD6 Q14847 LASP1 LIM and SH3 domain protein 1 0 ; 153.08 0.00098821 0.0 1001230.0 870520.0 644840.0 605320.0 961500.0 984870.0 684870.0 909790.0 799390.0 794000.0 False True 945689.7759974779 828698.9125228407 686407.418180479 662849.4308039055 1037164.5798133491 978723.0610110237 754103.3432870797 906634.150836582 654240.9269820071 786965.7777226532 1.2016911062310045 1.0530304315404364 0.8722201620594313 0.8422849500801425 1.3179284400583837 1.2436666100567726 0.9582415965651366 1.152062994988459 0.8313460959830686 1.0 19.58594137397731 -7.760129293059217 24.999999026357305 0.9156730501005867 1.0736917018801224 0.15552869764372523 0.1527044751682694 70.39581842103999 1343570.9137842336 0.12486235471140966 0.041205379783204 1.7372835480728758e-08 7.760129293059217 0.15801865177953567 ACLISLGYDVENDRQGEAEFNR ddPTM_KYSE-520_SHP099_60min_R1 4 ACLISLGYDVENDRQGEAEFNR 22 1 O43707;O43707-2;F5GXS2;O43707-3 O43707 ACTN4 Alpha-actinin-4 0 ;;; 337.41 1.5177999999999997e-65 3781330000.0 921800.0 1037630.0 655730.0 901700.0 650679.0 518243.0 626427.0 684315.0 722650.0 469186.0 False True 870665.9164372573 987780.6972856165 697999.4050050956 987397.2968940091 701883.7354429223 515008.45320451993 689752.3544983658 681941.2709853213 591434.976524033 465029.3770611845 1.8722815361462695 2.124125369300385 1.5009791626847242 2.123300904415972 1.5093320337707925 1.1074750942815375 1.4832446905985774 1.4664477227114996 1.271822826036681 1.0 18.826962332166655 -5.948762979623513 5.766000630754565 1.3078293377038956 1.888720478011641 0.6642833292230268 0.213140924747746 0.1227764040891218 9.035469661776007 0.0645838996408577 0.07297216754233297 1.1252189054257716e-06 5.948762979623513 0.5808911403077452 ACLS(ph)ALSEVK ddPTM_KYSE-520_SHP099_60min_R1 1 ACLSALSEVK 10 0 P42356;P42356-2;A8MTF1 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 ACLS(0.981)ALS(0.019)EVK 65.5 0.054403 0.0 128980.0 110580.0 117980.0 86026.0 106060.0 90671.0 93904.0 136010.0 113420.0 109440.0 True False 121825.2222847444 105267.57081603608 125585.17957467437 94201.88517534001 114406.3186011479 90105.08865630021 103396.73273472331 135538.21305497258 92825.78708552674 108470.44674303153 1.1231190240540871 0.9704723634578263 1.1577824499256277 0.8684566903140539 1.0547234019619975 0.8306879095811306 0.9532249183012222 1.249540470466256 0.8557703030894003 1.0 16.726942501945523 -1.0000021397620946 0.778833882911863 0.9891300375096731 27.64697424650961 0.08745487124057016 0.12627823603992305 1284.1464673737566 4.8773407829920785 0.044873275263604046 60267.7912194795 0.09999950730278359 1.0000021397620946 26.657844208999936 ACQSIYPLHDVFVR ddPTM_KYSE-520_SHP099_60min_R1 2 ACQSIYPLHDVFVR 14 0 P61247;H0Y9Y4;D6RG13;D6RB09;D6RAT0;D6R9B6 P61247 RPS3A 40S ribosomal protein S3a 0 ; 133.14 2.4279000000000003e-05 426740000.0 305870.0 316110.0 265590.0 293900.0 381380.0 325430.0 269010.0 237410.0 241020.0 251800.0 False True 288902.78136327176 300923.6011092166 282710.356359025 321832.1676357426 411392.4362446338 323398.8706578705 296204.1560845965 236586.48012191034 197256.84361976414 249569.24789743574 1.1576056897923608 1.2057719596642198 1.1327932377117598 1.2895505770326494 1.6484099692190513 1.2958282055278547 1.1868615968515726 0.9479792967887579 0.7903892217555178 1.0 17.929080649666005 -7.20251436534207 2.717830651431458 0.8873809187366931 1.2916575132327752 0.5845624890333534 0.14182904145163977 0.21693909499642405 3.119929544910389 0.09358203596011358 0.04458040804277492 6.273149456793537e-08 7.20251436534207 0.4042765944960821 ACRPPGS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 5 ACRPPGSPGR 10 1 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 1 ACRPPGS(1)PGR;ACRPPGS(1)PGR;ACRPPGS(1)PGR;ACRPPGS(1)PGR;ACRPPGS(1)PGR 119.39 0.00034946 22504310000.0 1614510.0 1348650.0 1410870.0 1478270.0 1524430.0 1631400.0 1696310.0 1837410.0 1910340.0 1828020.0 True False 1524949.9118541076 1283858.8296350802 1501816.9376718162 1618764.3363419166 1644393.968179786 1621217.827462897 1867789.5691902244 1831036.4535647181 1563470.411752471 1811825.1649780397 0.841665046567885 0.7085997338218013 0.8288972725963981 0.8934440075301289 0.9075897608474365 0.8947981619863122 1.030888413128351 1.010603279476423 0.8629256519744946 1.0 20.78901231621571 -5.532718802876013 0.9957789437879586 0.9684398754901234 0.7682256398532734 0.6118807887589872 0.057746113040715766 0.3795519381831995 0.7704474959444968 0.02480066327067841 0.05135969420959586 2.9327915553981725e-06 5.532718802876013 -0.20021423563685004 ACRPPGS(ph)PGRAPPPTPAPSGCDPR ddPTM_KYSE-520_SHP099_60min_R1 3 ACRPPGSPGRAPPPTPAPSGCDPR 24 2 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 1 ACRPPGS(0.998)PGRAPPPT(0.001)PAPS(0.001)GCDPR;ACRPPGS(0.998)PGRAPPPT(0.002)PAPS(0.001)GCDPR;ACRPPGS(1)PGRAPPPTPAPSGCDPR 70.632 0.014847999999999998 4463700000.0 1698200.0 1758090.0 1841790.0 1322540.0 1602010.0 1631820.0 1383770.0 1442320.0 2403070.0 1646550.0 True False 1603997.460722228 1673628.7174531105 1960514.7303681944 1448233.803963851 1728079.0728099684 1621635.2060871066 1523654.9758937655 1437316.9285600204 1966733.0644649665 1631962.8479965145 0.982863955935873 1.0255311384739838 1.2013231384372676 0.8874183660135283 1.0588960863486883 0.9936716439825289 0.9336333714730616 0.8807289518413658 1.2051334789143233 1.0 20.638176783728387 -5.278078886127772 24.998176470832853 0.98939066647664 1.065468612337449 0.10224893721943207 0.10183144941757925 1835.3141469936536 2757257.820903585 0.028086438735712135 0.041782254743944244 5.271341030219514e-06 5.278078886127772 0.07607794586080907 ACS(ph)LAK ddPTM_KYSE-520_SHP099_60min_R1 1 ACSLAK 6 0 P31946-2;P31946;P63104;E7EX29;B0AZS6;B7Z2E6;H0YB80;P63104-2 P31946-2;P63104 YWHAB;YWHAZ 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein zeta/delta 1 ACS(1)LAK 82.241 0.048428 0.0 554570.0 402230.0 357860.0 410600.0 413360.0 452770.0 544650.0 304040.0 456230.0 491250.0 True False 523806.8965921126 382906.2670404607 380928.22819624515 449623.3005486083 445889.08030332334 449944.09448349575 599708.5372717568 302985.3562034692 373390.1326223753 486897.9071867164 1.0758043706095501 0.7864200305416864 0.782357497482868 0.9234447179009665 0.915775306736599 0.9241035704656468 1.23169257542481 0.622276973737905 0.7668756162453314 1.0 18.89325977398032 -11.649643332325702 2.0446504540973818 3.334959611438698 0.8903624587009025 0.038181477512834294 0.16228419986845122 9964591.2564818 523374.1937975269 107974220.49650463 0.041178899986910315 2.240560460649663e-12 11.649643332325702 -2.4445971527377957 ACTGLSGPGSGSKS(ph)PPATR ddPTM_KYSE-520_SHP099_60min_R1 2 ACTGLSGPGSGSKSPPATR 19 1 I3L2J0;I3L2I4 I3L2J0 CIC 1 ACTGLSGPGSGS(0.004)KS(0.994)PPAT(0.001)R;ACTGLSGPGSGS(0.006)KS(0.993)PPATR 189.19 5.8054e-13 1649540000.0 1499680.0 1560520.0 1391930.0 915640.0 1052520.0 1264290.0 863640.0 1053050.0 2008480.0 1348540.0 True False 1416489.760862039 1485550.276811724 1481656.0349667452 1002662.1503027949 1135347.3359803897 1256399.097145438 950945.1595141471 1049397.2153337179 1643790.6616605422 1336592.9847482454 1.0597764443068975 1.111445513902301 1.1085319554073696 0.7501626611422413 0.8494338582767876 0.9400012655177055 0.7114695126828477 0.7851284776355291 1.22983636785297 1.0 20.350128776503972 -5.2404763046793885 24.478285187740166 0.8785053978083667 1.0950707735937704 0.289368933755794 0.14057326161493594 737.4719457120543 861133.6219063376 0.037872487855935034 0.06550332898938288 5.7480917986164445e-06 5.2404763046793885 0.2165653757854037 ACTLTVFPPEETTPS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 3 ACTLTVFPPEETTPSPSR 18 0 A0A0C4DG80;Q9P2N7-2;Q9P2N7-3;Q9P2N7-4;Q9P2N7;Q9P2N7-5 A0A0C4DG80 KLHL13 Kelch-like protein 13 1 ACTLTVFPPEET(0.001)T(0.01)PS(0.745)PS(0.244)R;ACTLTVFPPEET(0.002)T(0.001)PS(0.983)PS(0.014)R;ACTLTVFPPEET(0.046)T(0.026)PS(0.894)PS(0.034)R 209.54 4.2047000000000004e-18 479980000.0 445890.0 593200.0 429660.0 351568.0 440380.0 589540.0 421290.0 564730.0 567870.0 601540.0 True False 421155.5928403223 564701.7815886474 457356.571080307 384980.917017227 475035.4005805543 585860.4621812401 463878.10459417675 562771.0834389728 464759.12283775426 596210.8235910384 0.7063870298490379 0.9471511741222529 0.7671054482466486 0.6457127274182106 0.7967574250319172 0.9826397626472847 0.7780437493573025 0.94391289317652 0.7795214451801845 1.0 19.185463040640393 -6.023184004301933 24.266093055724742 0.8863170969424127 0.7722372524458038 0.27934676252631563 0.09980655580305317 793.9607363677227 831016.8314140814 0.03236042650847193 0.032591864931881265 9.480167172036406e-07 6.023184004301933 -0.1140798444966089 ACWAWGPSS(ph)PKPGEAQNGR ddPTM_KYSE-520_SHP099_60min_R1 1 ACWAWGPSSPKPGEAQNGR 19 1 Q16584;Q16584-2 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 ACWAWGPS(0.055)S(0.945)PKPGEAQNGR 61.181000000000004 0.013974 772650000.0 192660.0 183530.0 110730.0 170090.0 163840.0 155230.0 161090.0 169940.0 217950.0 189290.0 True False 181972.7657418119 174712.94331585368 117867.83297426405 186255.30246057693 176733.27587791887 154261.15199035523 177374.5492868951 169350.51780429424 178375.77407239075 187613.03786539144 0.9699366729106197 0.9312409484100284 0.6282496905083528 0.9927631074030758 0.9420095633477319 0.8222304470174108 0.945427627551971 0.9026585770963307 0.9507642757768879 1.0 17.517400563538263 -7.900820172551034 0.5911236475822597 1.001707913324746 0.8760356915581878 0.1175213308899874 0.09854951611458192 1.887043477521494 1.5925880033397686 0.10427263897781357 0.047507188609391925 1.2565501532035097e-08 7.900820172551034 -0.12567222176655812 ADAASSLTVDVT(ph)PPTAK ddPTM_KYSE-520_SHP099_60min_R1 6 ADAASSLTVDVTPPTAK 17 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 ADAASSLTVDVT(1)PPTAK;ADAASSLTVDVT(0.999)PPT(0.001)AK;ADAASSLTVDVT(1)PPTAK;ADAASSLTVDVT(1)PPTAK;ADAASSLTVDVT(1)PPTAK;ADAASSLTVDVT(1)PPTAK 291.67 6.037899999999999e-37 7168810000.0 6292660.0 8334620.0 5836190.0 5130250.0 5417620.0 7763840.0 5683780.0 7242000.0 8760180.0 7671950.0 True False 5943593.605693295 7934212.344680337 6212400.145634169 5617827.417534088 5843955.871958802 7715382.994709786 6258351.950747208 7216879.192295501 7169552.138166902 7603982.491686783 0.7816422002800842 1.0434285393679674 0.8169929576279283 0.7388006776285845 0.7685388384767894 1.0146502839985223 0.8230360811047744 0.9490920317327807 0.9428680492104194 1.0 22.8583237794819 -6.25715426481422 24.985245541176816 0.9350667148634193 0.8359684367896651 0.2821231533680404 0.091486471656708 617.4291176845798 3600052.8344961386 0.032138731306640765 0.031055202413922633 5.531535898114127e-07 6.25715426481422 -0.09909827807375415 ADAETLRK ddPTM_KYSE-520_SHP099_60min_R1 6 ADAETLRK 8 1 P08758;D6RBE9;E9PHT9;D6RCN3 P08758 ANXA5 Annexin A5;Annexin 0 ;;;;; 140.5 0.0015114 6458590000.0 6995650.0 7470150.0 5219950.0 4350290.0 7609620.0 7641950.0 5068480.0 6357720.0 7429910.0 6831630.0 False True 6607587.349017465 7111272.781076248 5556436.329215302 4763740.253637619 8208453.8011848815 7594253.755412572 5580851.4219979 6335666.553223003 6080825.636789154 6771107.07312772 0.9758503709446258 1.0502378273264255 0.820609727361565 0.7035393477299046 1.2122764730396178 1.1215675181908804 0.8242155029783018 0.935691384702387 0.8980548632766326 1.0 22.690960302435514 ADAPDAGAQS(ph)DSELPSYHQNDVSLDR ddPTM_KYSE-520_SHP099_60min_R1 2 ADAPDAGAQSDSELPSYHQNDVSLDR 26 0 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 ADAPDAGAQS(1)DSELPSYHQNDVSLDR;ADAPDAGAQS(0.996)DS(0.004)ELPSYHQNDVSLDR 204.53 3.5263e-16 1205210000.0 105023.0 247378.0 337990.0 307800.0 178637.0 197925.0 131143.0 130073.0 181167.0 186726.0 True False 99197.16483183988 235493.58955805158 359777.3762031209 337053.2194565559 192694.71559450566 196689.6766584492 144400.2142723402 129621.80712226639 148271.6396484183 185071.75291062973 0.5359930041822304 1.2724447996759956 1.943988591153917 1.8212029342982303 1.041189228307342 1.0627752402249613 0.7802390802559177 0.7003867693675552 0.8011575905914609 1.0 17.49772519111729 -6.18642808057203 2.2985252631658932 0.8212739919389386 1.4153067241163617 0.2948801383786811 0.3704477247933068 0.3890413702227367 4.033847457309741 0.151190000852957 0.14661339333081067 6.50986405655872e-07 6.18642808057203 0.5940327321774231 ADDDRFPR ddPTM_KYSE-520_SHP099_60min_R1 1 ADDDRFPR 8 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 123.92 0.00098223 235490000.0 493170.0 460390.0 318110.0 302790.0 496580.0 475640.0 384370.0 435610.0 409250.0 413850.0 False True 465812.87698997883 438272.1733405217 338615.8795939962 331567.0705628673 535658.0208462946 472671.35433030035 423225.8706897004 434098.97058213875 334940.5163529522 410183.61097042816 1.1356204015268694 1.0684780220829413 0.8255226940756745 0.8083381726988876 1.305898155167668 1.152340907068511 1.031796150237247 1.0583040350030823 0.8165624061881387 1.0 18.64591032402142 -7.738710998998166 24.95442069425759 0.9082811598784282 1.0450423532597952 0.12979450976596485 0.1448123352127391 454.1346594498824 498615.9584856966 0.1055151184574748 0.039820099940469124 1.8251098165389923e-08 7.738710998998166 0.13676119338136705 ADDFPVRDDPS(ph)DVT(ph)DEDEGPAEPPPPPK ddPTM_KYSE-520_SHP099_60min_R1 1 ADDFPVRDDPSDVTDEDEGPAEPPPPPK 28 1 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 2 ADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPK 148.95 9.462200000000002e-07 198050000.0 168440.0 146360.0 140830.0 158000.0 156460.0 189750.0 173970.0 169990.0 189220.0 166230.0 True False 159096.29742318476 139328.64590916113 149908.12713596705 173016.27249556774 168772.5118643748 188565.6998658111 191556.58538358123 169400.34436596418 154862.41784802845 164757.33152498302 0.9656401687900618 0.8456597628739453 0.909872269406328 1.0501279117241127 1.0243702680920328 1.1445056685517991 1.1626589457995349 1.028180917947661 0.9399424985500318 1.0 17.329983139484376 -5.261412253399184 4.499340765355359 1.0596642483352445 0.898782776614889 0.4828771883009958 0.06725475002709916 0.16448796866639823 8.994797539906491 0.020175572268701408 0.033356882579917514 5.477567607576294e-06 5.261412253399184 -0.1608814717203555 ADDGRPFPQVIK ddPTM_KYSE-520_SHP099_60min_R1 8 ADDGRPFPQVIK 12 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;;;;;;; 158.2 5.2395e-06 19616120000.0 30578600.0 29440700.0 22230000.0 19240550.0 30271200.0 28368600.0 22322500.0 25267300.0 26112100.0 24504900.0 False True 28882344.10107216 28026324.580608364 23662981.369257577 21069166.087117698 32653371.22043253 28191541.044602133 24579076.146605738 25179653.63373216 21370800.872473817 24287805.650523722 1.1891705869463496 1.153925759448097 0.9742741567411763 0.8674791947152862 1.3444348036327614 1.160728204525724 1.011992458284338 1.0367199901070192 0.8798983811043875 1.0 24.53372881576977 -7.21085419179439 2.091095393937488 0.9542454865976481 1.1067056002145477 0.208856230169835 0.12573182437279395 0.6067065862984882 5.027591843600679 0.09093152586539488 0.03944018973979534 6.153834442845802e-08 7.21085419179439 0.1524601136168996 ADEASELACPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 ADEASELACPTPK 13 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 ADEASELACPT(1)PK;ADEASELACPT(1)PK;ADEASELACPT(1)PK;ADEASELACPT(1)PK;ADEASELACPT(1)PK;ADEASELACPT(1)PK 176.25 3.7515e-07 7155160000.0 7043650.0 8266500.0 5193880.0 5188150.0 5719270.0 8616050.0 6237230.0 9088600.0 10019400.0 9557400.0 True False 6652924.693331842 7869364.931730525 5528685.815301824 5681230.216125819 6169344.010805093 8562274.03598853 6867750.077898699 9057073.767895194 8200129.528519891 9472728.871544695 0.702323985363572 0.8307389600656107 0.5836423580019846 0.5997458908796357 0.6512742098359111 0.9038867418351753 0.7250022850890265 0.9561208697846199 0.8656565219714472 1.0 23.175348661577672 -6.9769395181336105 0.8945070792366295 0.9623337677812552 0.6779104875318476 0.5729554246066376 0.09272156781482345 0.4655326403109593 0.6946392107284464 0.08085892316296493 0.04000534309859977 1.0545337454321674e-07 6.9769395181336105 -0.28442328024940766 ADEDPIMGFHQMFLLK ddPTM_KYSE-520_SHP099_60min_R1 2 ADEDPIMGFHQMFLLK 16 0 H3BRV9;P61970 H3BRV9 NUTF2 Nuclear transport factor 2 0 ; 233.4 1.0415000000000001e-22 1445580000.0 1869220.0 1254710.0 798430.0 830230.0 1948530.0 1186920.0 880940.0 861400.0 980440.0 764010.0 False True 1765530.64040231 1194431.8482418926 849898.0753331685 909134.8095822494 2101868.22538087 1179511.9920143806 969994.0123458771 858412.0044522706 802416.8108810954 757241.4657907858 2.3315292679575723 1.577346067538113 1.1223607181173334 1.2005877261790485 2.775690873169357 1.557643163112599 1.2809573381364083 1.133604065852142 1.0596577804190015 1.0 19.53039388818946 -6.795269642090142 3.1661957836626673 1.0994255260553487 1.7518537224240462 0.32574140576090815 0.46351197517104664 0.35070390446056043 7.21320928755398 0.22036401619827847 0.1481107955549994 1.6022502864893356e-07 6.795269642090142 0.6524281963686975 ADEFADQS(ph)PGNLSSSSLR ddPTM_KYSE-520_SHP099_60min_R1 1 ADEFADQSPGNLSSSSLR 18 0 A0A087WV86;Q6PGQ7;Q6PGQ7-2;H3BLY2 A0A087WV86 BORA Protein aurora borealis 1 ADEFADQS(0.728)PGNLS(0.254)S(0.006)S(0.006)S(0.006)LR 166.91 1.4143000000000002e-06 0.0 147770.0 222290.0 150040.0 119200.0 145600.0 153260.0 134510.0 184850.0 192070.0 140510.0 True False 139572.90352780806 211610.8547359073 159711.81847248794 130528.73216121313 157057.89164932238 152303.44749108952 148107.58349109357 184208.79849431448 157194.92969068172 139265.19071512594 1.002209545767338 1.5194813122309085 1.1468179352813772 0.9372674642597254 1.1277612937075736 1.0936217924164122 1.0634932012124638 1.3227196081691583 1.1287453015609046 1.0 17.087475176322314 -4.980295009840881 24.999072008821795 1.1043271597799122 1.278921518173143 0.15549409682524473 0.14961761633687137 382.00755467123764 484634.6853702497 0.03776053481193892 0.07859130425963137 1.0464174905936622e-05 4.980295009840881 0.1745943583932308 ADEGISFR ddPTM_KYSE-520_SHP099_60min_R1 12 ADEGISFR 8 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ;;;;;;;;;;; 183.04 7.1247e-05 14026040000.0 14379240.0 15746350.0 11795910.0 10083300.0 15291670.0 15215160.0 12231560.0 13250530.0 14014750.0 13638820.0 False True 13581594.892895706 14989871.710246772 12556293.23272332 11041613.800345305 16495037.431299407 15120196.542662982 13468045.453321839 13204567.004126962 11470024.683097204 13517990.66564138 1.0047051539557568 1.1088831233140637 0.9288579599805167 0.8168088049069103 1.2202284969189077 1.1185239668121625 0.9963052783838291 0.9768143306748209 0.8485007104088714 1.0 23.68837738741823 -7.3642136443934225 2.956128887152624 0.9235428170595524 1.0306576402642724 0.12344323110134459 0.10938910307698221 0.5945094348474941 9.844254371411585 0.07715837398586653 0.03179063862098972 4.323011149304686e-08 7.3642136443934225 0.10711482320471999 ADEGLPANESFLNGNLAGASLS(ph)PLHTK ddPTM_KYSE-520_SHP099_60min_R1 1 ADEGLPANESFLNGNLAGASLSPLHTK 27 0 A0A1B0GTX4;A0A096LNR9;A0A1B0GUM4;A0A669KBC2;O76039;O76039-1 A0A1B0GTX4 CDKL5 Cyclin-dependent kinase-like 5 1 ADEGLPANESFLNGNLAGAS(0.171)LS(0.79)PLHT(0.039)K 63.033 0.02292 150970000.0 23911.0 33139.0 35726.0 27334.0 23716.0 33139.0 24387.0 44785.0 42064.0 38577.0 True False 22584.60916460323 31546.952697346907 38028.955123621075 29931.815141733237 25582.31427441848 32932.16720871212 26852.275954184068 44629.65128789758 34426.23794714862 38235.23779245185 0.5906752636716106 0.8250753629044959 0.9946049068675729 0.7828332415299423 0.6690768974233704 0.8613041034941169 0.7022913287460989 1.1672387531667991 0.900379857293442 1.0 15.222615226062373 -7.2527082232082485 24.9986673095351 1.0253569825941649 0.7850183757304993 0.4671812139776499 0.12074913069258099 563.9170533877946 1614588.1243534558 0.05797278474421475 0.03279009441400174 5.5884552391678156e-08 7.2527082232082485 -0.2403386068636656 ADEICIAGS(ph)PLT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 ADEICIAGSPLTPR 14 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 2 ADEICIAGS(1)PLT(1)PR;ADEICIAGS(1)PLT(1)PR 73.91 0.040652999999999995 531090000.0 334190.0 301470.0 258680.0 295680.0 305740.0 285310.0 289000.0 302250.0 375010.0 291430.0 True False 315651.81450875115 286986.9286843043 275354.9267026336 323781.3383005668 329799.99857736175 283529.2744596288 318214.9403681961 301201.5652956803 306917.63723279285 288848.15692910913 1.0927949752721473 0.9935563783248871 0.9532860781597886 1.1209396028101752 1.1417763647295949 0.9815858874571746 1.1016685851531827 1.0427678282524164 1.0625570212937812 1.0 18.139951763652785 -5.264282423849013 24.960011938407785 1.0675701870388044 1.0112468696732249 0.14358491081819214 0.05695557480376763 443.336232343407 3892204.1775765265 0.015902345917443057 0.0247292559530102 5.441486751840913e-06 5.264282423849013 -0.056323317365579495 ADEPS(ph)S(ph)EES(ph)DLEIDK ddPTM_KYSE-520_SHP099_60min_R1 2 ADEPSSEESDLEIDK 15 0 P50502;F6VDH7;Q3KNR6;Q8IZP2 P50502 ST13;ST13P4 Hsc70-interacting protein;Putative protein FAM10A4 3 ADEPS(1)S(1)EES(1)DLEIDK;ADEPS(1)S(1)EES(1)DLEIDK 116.87 0.00022776 269380000.0 1520810.0 1250020.0 944260.0 1374450.0 1244540.0 1262280.0 1430720.0 1536030.0 1199270.0 1422170.0 True False 1436447.6376404257 1189967.1628817283 1005128.5104694191 1505077.3147565378 1342478.2175360436 1254401.642301008 1575351.1400816082 1530701.8704420973 981512.7991364814 1409570.680231517 1.0190674776269426 0.8442053879031312 0.713074217962827 1.0677558322292389 0.9524022004455615 0.8899175187830788 1.117610604544401 1.0859348111516374 0.6963203852787796 1.0 20.426824390235637 -5.278501341620823 24.82019106848707 0.9781537096117344 0.857324635441747 0.13445005262795218 0.13213275443997244 1405.2325780269862 2044201.8264289668 0.03725701928170185 0.055425087351326015 5.266215880540251e-06 5.278501341620823 -0.12082907416998745 ADEVAPAKK ddPTM_KYSE-520_SHP099_60min_R1 2 ADEVAPAKK 9 1 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 0 ; 98.249 0.0068553 853770000.0 872430.0 908540.0 585930.0 655540.0 946780.0 942870.0 584890.0 833790.0 982420.0 935870.0 False True 824034.5687539119 864892.3746536571 623699.9853211463 717842.3245047118 1021286.1995586909 936985.1985901311 644016.3891763113 830897.7770980491 804037.2927928339 927578.9198958428 0.8883713839103223 0.9324191786837667 0.6723956010030728 0.7738881394429682 1.1010235114801556 1.0101406775127495 0.6942982158850995 0.8957704398794983 0.8668128129551701 1.0 19.82311050819035 ADEWLMK ddPTM_KYSE-520_SHP099_60min_R1 4 ADEWLMK 7 0 P35579;P35579-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 0 ;;; 134.66 0.013935 2222930000.0 3516370.0 3570070.0 2260890.0 2019690.0 3410780.0 3475970.0 2465930.0 2790410.0 2508390.0 2963590.0 False True 3321309.946390188 3398558.4784156815 2406630.5869519017 2211640.730358062 3679188.981316456 3454275.1818843936 2715210.2695575966 2780730.718996592 2052929.6073661135 2937334.8982381294 1.1307222572347382 1.157021107962256 0.8193245477032413 0.7529412909929497 1.252560265948328 1.1759895624963754 0.9243788548545256 0.9466849424165178 0.6989089356469024 1.0 21.486076332257266 -7.161257292876243 2.677897517061677 0.8594869545759111 1.0373983619110199 0.1662580116899821 0.16521720147122884 0.5609504121087913 7.744381726541863 0.10320421472020386 0.05087826640859711 6.898310001471402e-08 7.161257292876243 0.1779114073351088 ADFCIIHYAGK ddPTM_KYSE-520_SHP099_60min_R1 2 ADFCIIHYAGK 11 0 P35579;P35579-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 0 ; 150.94 9.025799999999999e-05 2480200000.0 5735200.0 5657400.0 3717700.0 3475600.0 5592300.0 5272600.0 3838400.0 4458200.0 3868600.0 4010800.0 False True 5417057.023162245 5385610.012069479 3957348.8905303134 3805919.9790227576 6032382.194165572 5239691.747628332 4226422.931173986 4442735.544751702 3166159.7594698337 3975267.4323551804 1.3626899612016452 1.3547792956608027 0.9954924939944856 0.9573997331716394 1.5174783324179115 1.318072767880181 1.0631795226591854 1.1175941292884455 0.7964645934761717 1.0 21.92262048892981 -7.317026346093612 1.816876262716486 0.9183584017471179 1.2365187752962377 0.35311457817519143 0.17389724490756966 0.46292329605468935 2.7840738824127005 0.14472425799825334 0.05481550948834195 4.8191856157173613e-08 7.317026346093612 0.31816037354911975 ADGAPSAAPPDGLLAS(ph)PDLGLLK ddPTM_KYSE-520_SHP099_60min_R1 1 ADGAPSAAPPDGLLASPDLGLLK 23 0 P17535 P17535 JUND Transcription factor jun-D 1 ADGAPSAAPPDGLLAS(1)PDLGLLK 192.62 2.7433000000000002e-15 77114000.0 160620.0 200500.0 147930.0 145560.0 158430.0 230610.0 172370.0 252460.0 266500.0 272120.0 True False 151710.0884119682 190867.6790433643 157465.80449636877 159393.97863579023 170897.53965660834 229170.6774495638 189794.84176908623 251584.2751846068 218110.31791829353 269709.22850615653 0.5624949848851953 0.7076794520548171 0.5838354340655213 0.5909845188413781 0.6336362333731096 0.8496953505034872 0.7037016968989397 0.9327981714903167 0.8086868926448871 1.0 18.04104536083156 -6.99166699590033 0.5445807457011413 0.9803560910064353 0.592245297244232 0.7476664936190967 0.07335166436647456 0.42009222571537197 0.2640376226297374 0.06923700107159252 0.04926995737423076 1.0193727131638237e-07 6.99166699590033 -0.38811079376220325 ADGIVSK ddPTM_KYSE-520_SHP099_60min_R1 2 ADGIVSK 7 0 Q8WVC2;P63220 Q8WVC2 RPS21 40S ribosomal protein S21 0 ; 101.33 0.037017 945570000.0 1858620.0 2414800.0 1661800.0 1266420.0 2134160.0 2406500.0 1761750.0 2053640.0 2148400.0 2257300.0 False True 1755518.6435328873 2298789.383311301 1768922.2869740103 1386780.1760369416 2302106.2502906444 2391480.140854148 1939844.8830230762 2046516.4021631805 1758304.7167567068 2237302.0781528275 0.7846587462084188 1.0274827908841166 0.7906497313203574 0.619844852234662 1.0289653206737825 1.068912492509109 0.8670464761846826 0.9147251156414407 0.7859040287525264 1.0 21.093328630026367 -5.8199166450671855 24.999985064141015 0.9423670481838792 0.8204202440514711 0.2401805494493814 0.11959252888683 137.91624247367395 58960.33325432404 0.03930145869311605 0.044563686387342025 1.5138517768899053e-06 5.8199166450671855 -0.1219468041324081 ADHDFVVQEDFMK ddPTM_KYSE-520_SHP099_60min_R1 3 ADHDFVVQEDFMK 13 0 P62333;A0A087X2I1 P62333 PSMC6 26S protease regulatory subunit 10B 0 ;; 222.94 2.2307e-10 461470000.0 1392900.0 1349430.0 824580.0 800540.0 1302790.0 1362760.0 935500.0 1064990.0 1062070.0 1117530.0 False True 1315633.0603226917 1284601.3572642743 877733.7461746474 876623.0809088715 1405312.1611388798 1354254.5093498444 1030069.4696001632 1061295.7982605337 869224.860605938 1107629.5536251834 1.1877915824986154 1.1597752633629865 0.7924434151308933 0.7914406744021536 1.2687564687484232 1.2226601438337188 0.9299765126605982 0.958168545419357 0.7847613471137839 1.0 20.079044022453385 -6.965602366661179 24.741302399733403 0.9116932537231454 1.0597357124601616 0.17153528528531703 0.1631371837585403 338.01538225897787 243124.735344784 0.07523868269269499 0.05072564569896948 1.0824245489867756e-07 6.965602366661179 0.14804245873701627 ADHGEPIGR ddPTM_KYSE-520_SHP099_60min_R1 2 ADHGEPIGR 9 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 140.83 0.00068364 0.0 557610.0 557250.0 358870.0 358640.0 466910.0 493670.0 369160.0 482990.0 450820.0 400800.0 False True 526678.2617320231 530478.8735506969 382003.33441230224 392725.0377709523 503653.16064550297 490588.82241241116 406478.29545440525 481314.620420713 368962.4522473735 397249.2238176811 1.3258131927118477 1.335380516172291 0.9616213487873899 0.9886112148860857 1.2678518432465367 1.2349648356709404 1.0232324472481786 1.2116187812656722 0.9287933874395942 1.0 18.599684875142195 -4.740888574782121 24.73603332274537 1.0920128902546644 1.3305971662956226 0.4312965600104999 0.11542857252025045 213.73220761371502 257254.80611428784 0.029990311492188334 0.07914470467954837 1.815981522206891e-05 4.740888574782121 0.23858427604095822 ADHGVPLPGS(ph)PPPTVALPLPSR ddPTM_KYSE-520_SHP099_60min_R1 2 ADHGVPLPGSPPPTVALPLPSR 22 0 A0A1W2PRX0;V9GYJ6;V9GY36;Q9UK80-2;Q9UK80-3;Q9UK80 A0A1W2PRX0 USP21 Ubiquitin carboxyl-terminal hydrolase 21 1 ADHGVPLPGS(1)PPPTVALPLPSR;ADHGVPLPGS(1)PPPTVALPLPSR 165.47 1.1002999999999998e-09 2141770000.0 1316510.0 1451180.0 1202960.0 981490.0 1108880.0 1460760.0 1221180.0 1510810.0 1881270.0 1671010.0 True False 1243480.5659023784 1381463.1345344125 1280504.726404053 1074770.5145042709 1196142.5473358566 1451642.854998591 1344628.7919682814 1505569.352735703 1539678.7909574057 1656206.1514261062 0.7508005961888603 0.8341130319706147 0.7731553981377567 0.6489352268006131 0.7222183943139545 0.876486815212362 0.8118728401113983 0.9090470720926289 0.9296419951294332 1.0 20.65945082859227 -7.26564097736216 0.8704006168085152 0.9889708481276472 0.7519531323708494 0.7136207902033901 0.053860456223386484 0.35694941753585896 0.49290299810389526 0.05337117832619013 0.022849763525104302 5.424491370447538e-08 7.26564097736216 -0.23701771575679786 ADHQPLT(ph)EASYVNLPTIALCNTDSPLR ddPTM_KYSE-520_SHP099_60min_R1 1 ADHQPLTEASYVNLPTIALCNTDSPLR 27 0 C9J9K3;A0A0C4DG17;P08865 C9J9K3 RPSA 40S ribosomal protein SA 1 ADHQPLT(0.666)EAS(0.179)Y(0.155)VNLPTIALCNTDSPLR 83.21600000000001 0.005268999999999999 41298000.0 61832.0 65183.0 60834.0 46792.0 55784.0 65722.0 49195.0 52038.0 77558.0 63578.0 True False 58402.05570096384 62051.510838322334 64755.456977841444 51239.097611472236 60173.88343245747 65311.804619661896 54168.110696932185 51857.49232376051 63475.42227807511 63014.74838293555 0.9267997921067502 0.9847140936156771 1.027623828382647 0.8131286552172893 0.9549174594300628 1.0364526764872142 0.8596100450605141 0.8229421469498966 1.0073105726351566 1.0 15.943401905444146 ADHQPLTEASY(ph)VNLPTIALCNTDSPLR ddPTM_KYSE-520_SHP099_60min_R1 1 ADHQPLTEASYVNLPTIALCNTDSPLR 27 0 C9J9K3;A0A0C4DG17;P08865 C9J9K3 RPSA 40S ribosomal protein SA 1 ADHQPLT(0.05)EAS(0.176)Y(0.775)VNLPTIALCNTDSPLR 106.67 7.1028e-05 32870000.0 89731.0 93945.0 87153.0 71183.0 78113.0 74217.0 59644.0 76720.0 113520.0 88733.0 True False 84753.44255568627 89431.74118568024 92771.0218297305 77948.2109180506 84260.04869782648 73753.7841736017 65673.39758934487 76453.8762265826 92907.62960632148 87946.89465322942 0.9636888589399911 1.0168834447004127 1.0548527289738017 0.8863099854224168 0.9580787250085406 0.8386172640251767 0.7467392435888961 0.8693186556277709 1.0564060274402185 1.0 16.424345017536858 -5.272082211789356 24.25235929177996 0.8949651426822479 1.0123158541915291 0.2319396307399365 0.08435182090285746 625.004092636104 1424227.7335360746 0.02483478574865589 0.03729358385568569 5.344631761331191e-06 5.272082211789356 0.11735071150928122 ADIDVSGPKVDIDT(ph)PDIDIHGPEGK ddPTM_KYSE-520_SHP099_60min_R1 3 ADIDVSGPKVDIDTPDIDIHGPEGK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ADIDVSGPKVDIDT(1)PDIDIHGPEGK;ADIDVSGPKVDIDT(1)PDIDIHGPEGK;ADIDVSGPKVDIDT(1)PDIDIHGPEGK 225.05 2.6825e-21 2804470000.0 1998010.0 2119280.0 1913180.0 1643460.0 1553030.0 2498120.0 1717950.0 2031610.0 3934710.0 1995670.0 True False 1887176.4023658088 2017466.6076958692 2036506.6439962299 1799653.9442757345 1675244.6254680445 2482528.306449436 1891617.15157627 2024562.81909134 3220265.849967316 1977989.916407768 0.9540879792719643 1.019957984093162 1.0295839362491466 0.9098397971330866 0.8469429553566482 1.2550763205901279 0.9563330610965096 1.0235455713384796 1.6280496797555208 1.0 20.915603640726765 -7.565721577260703 24.961216826685153 1.3179504166395395 0.9984551177062778 0.34702437913602346 0.17294252218977615 141.15670488313114 82238.74213917115 0.10848868619977725 0.04100489376361435 2.7181813148023204e-08 7.565721577260703 -0.3194952989332617 ADIKGPEDK ddPTM_KYSE-520_SHP099_60min_R1 1 ADIKGPEDK 9 1 P36542-2;P36542 P36542-2 ATP5C1 ATP synthase subunit gamma, mitochondrial 0 83.397 0.007571 663760000.0 459730.0 561860.0 363300.0 358600.0 483130.0 491300.0 384800.0 366880.0 439350.0 390230.0 False True 434227.8604509656 534867.4022309465 386718.89930055226 392681.23618297843 521149.58236632624 488233.6144615188 423699.3392860962 365607.3789104355 359575.11511220346 386772.8657943463 1.122694735989706 1.3828979474360141 0.9998604698039424 1.0152760726285637 1.347430568315592 1.2623264392107612 1.0954732783953471 0.9452767017654106 0.9296803031249757 1.0 18.56112705995201 -7.091650393267436 3.5624988612705493 0.9541615353753733 1.1878922372633032 0.4256738478595531 0.11917050767374411 0.25110066093840633 5.9241079824299145 0.06387858728450764 0.03537422399614537 8.097474829981128e-08 7.091650393267436 0.23373070188792988 ADIKS(ph)PSLDVTVPEAELNLETPEISVGGK ddPTM_KYSE-520_SHP099_60min_R1 4 ADIKSPSLDVTVPEAELNLETPEISVGGK 29 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ADIKS(0.956)PS(0.044)LDVTVPEAELNLETPEISVGGK;ADIKS(0.967)PS(0.032)LDVT(0.001)VPEAELNLETPEISVGGK;ADIKS(0.629)PS(0.317)LDVT(0.053)VPEAELNLETPEISVGGK;ADIKS(0.936)PS(0.062)LDVT(0.002)VPEAELNLETPEISVGGK 302.51 4.6413e-53 2130960000.0 558904.0 815225.0 581492.0 525423.0 585098.0 809902.0 778397.0 1148418.0 1416939.0 1087153.0 True False 527900.480972498 776060.3673223279 618975.9047400964 575359.0439458148 631141.8838477698 804847.1012001073 857084.9651826386 1144434.406000775 1159658.5957254393 1077521.6702122344 0.4899209877315227 0.7202271553104551 0.5744440430772771 0.5339651719788513 0.5857347478899954 0.7469428443528011 0.79542248557639 1.0620987379078521 1.0762276321524251 1.0 20.039285453203142 -6.91685475037972 1.4327698875556159 1.0649644123698376 0.5871576326508479 0.8950431512217564 0.0680092552036105 0.12407638502959532 0.5013748899622154 0.044850035504130116 0.02292567524951554 1.2110030853388325e-07 6.91685475037972 -0.47780677971898977 ADILEDKDGK ddPTM_KYSE-520_SHP099_60min_R1 6 ADILEDKDGK 10 1 A0A087X0X3;P52272-2;P52272;M0R2T0;M0QYQ7;M0R0N3;M0R019;M0QZM1 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 ;;;;; 153.95 0.00013512 8181680000.0 9101300.0 9349130.0 6205370.0 5001230.0 7456910.0 8182070.0 6095890.0 7659210.0 7375060.0 7800900.0 False True 8596432.746008264 8899983.761469778 6605378.07914305 5476545.395525376 8043726.392985917 8131002.666145229 6712122.051353218 7632641.98818306 6035935.014133171 7731790.095008368 1.1118295556882887 1.1510896767898025 0.8543142012362017 0.7083153226134561 1.040344641298389 1.0516326188672132 0.8681200561415336 0.9871765651153259 0.7806646248751582 1.0 22.882371040680734 -4.755406938395701 24.976791832088107 0.9116890419467383 1.1314597128712123 0.40455386970704643 0.1068282581937883 142.25678522985473 588984.719773903 0.028297297801453937 0.07088930251681498 1.756277192931617e-05 4.755406938395701 0.219770670924474 ADIPVKS(ph)SPQAAVPYKK ddPTM_KYSE-520_SHP099_60min_R1 1 ADIPVKSSPQAAVPYKK 17 2 A0A2R8Y6X0;A0A669KBJ7;Q9H2P0 A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein 1 ADIPVKS(0.644)S(0.356)PQAAVPYKK 177.4 9.165e-09 760680000.0 846470.0 904440.0 829220.0 595280.0 694080.0 778880.0 571460.0 601430.0 943570.0 690570.0 True False 799514.6217038886 860989.3448078828 882672.8479989105 651855.2322225418 748700.1472250123 774018.7210091338 629228.7537121426 599343.7797048179 772241.4734640311 684452.0870553293 1.1681089689470958 1.257924931622398 1.289605020851602 0.9523752568670998 1.0938678709361425 1.130858880625437 0.9193174593406965 0.8756548355098646 1.1282622817126498 1.0 19.3845900280646 -5.259620466576508 24.97296434127574 1.0133628645153692 1.240484177609555 0.590660168783947 0.0855275175229678 114.2577173010975 1568701.5367236792 0.024698002026857034 0.04010623604325412 5.500213319328891e-06 5.259620466576508 0.22712131309418582 ADIPVKSS(ph)PQAAVPYKK ddPTM_KYSE-520_SHP099_60min_R1 1 ADIPVKSSPQAAVPYKK 17 2 A0A2R8Y6X0;A0A669KBJ7;Q9H2P0 A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein 1 ADIPVKS(0.031)S(0.969)PQAAVPYKK 137.89 8.3325e-06 2152700000.0 1924100.0 1985500.0 1952000.0 1583100.0 1667900.0 1741500.0 1482400.0 1631900.0 2311800.0 1666200.0 True False 1817366.337401742 1890113.599703741 2077829.0433104285 1733557.3480236272 1799154.2409471478 1730630.6525233744 1632255.4588298055 1626239.319788323 1892035.3957355036 1651438.7642839854 1.1004745538898004 1.1445253923921532 1.2581932120330923 1.0497254790886819 1.0894465358678966 1.0479532695683842 0.9883838832725371 0.9847409149883992 1.145689102529838 1.0 20.65529204448699 -5.382521566972643 8.616382310184953 1.0422396643675678 1.1652262557734054 0.485602988047644 0.058505936380964026 0.26668906801244063 17.66026267542192 0.016740059697641755 0.02485007582226815 4.144560017289977e-06 5.382521566972643 0.12298659140583768 ADKDYHFK ddPTM_KYSE-520_SHP099_60min_R1 8 ADKDYHFK 8 1 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 0 ;;;;;;; 114.28 0.0025901999999999995 175586650000.0 231471300.0 215687900.0 152368500.0 131188600.0 208540500.0 210660500.0 166938500.0 192076400.0 178037300.0 140796100.0 False True 218631125.56240326 205325929.52986163 162190417.30821964 143656725.10070935 224951450.91686514 209345689.67895508 183814272.7427544 191410131.79936868 145710214.2751018 139548756.0917083 1.566700640589901 1.4713562147048165 1.162249108129862 1.0294375179260027 1.611991802843675 1.500161631977413 1.3172046666038055 1.3716362449951058 1.0441527273761175 1.0 27.05619402367972 -7.784354146841143 4.8476552996428035 1.0057408184911687 1.3739457574266796 0.4161398528037116 0.1692113820931568 0.202410709041585 11.485902912268838 0.16370217520409447 0.04627534365623784 1.643031361545568e-08 7.784354146841143 0.3682049389355109 ADKDYHFKVDNDENEHQLSLR ddPTM_KYSE-520_SHP099_60min_R1 7 ADKDYHFKVDNDENEHQLSLR 21 2 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 0 ;;;;;; 237.45 1.1740000000000001e-26 8929220000.0 9821470.0 19833120.0 17022550.0 8801710.0 9137600.0 8659550.0 6039430.0 6663070.0 18936800.0 5688970.0 False True 9276653.48048495 18880307.145079974 18119850.810043007 9638221.872069405 9856677.134167925 8605502.53635303 6649954.523556722 6639957.365342232 15498354.477880474 5638570.1517516915 1.6452138096753204 3.348421077853323 3.213554202994859 1.709337937220693 1.7480809618207598 1.5261852392985877 1.1793689436480332 1.177595948376992 2.748632022085549 1.0 22.426897934695514 -5.346610686225881 5.942831080438878 1.569573174505279 2.792959968950118 0.4184218112000829 0.6218919376196 0.20681498905276677 11.490839026224755 0.17369471327602706 0.2601494168229714 4.501832309625908e-06 5.346610686225881 1.223386794444839 ADLAEEYSKDR ddPTM_KYSE-520_SHP099_60min_R1 2 ADLAEEYSKDR 11 1 P68036-2;P68036;P68036-3 P68036-2 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 0 ; 153.63 0.00017416 0.0 732840.0 670990.0 456720.0 308390.0 568630.0 585620.0 362160.0 377640.0 603730.0 479490.0 False True 692187.9043196785 638754.6332234765 486160.9019778378 337699.292879166 613377.945937872 581964.9283552901 398770.6671409886 376330.05498183897 494107.8507947896 475242.0916375753 1.4564953662554545 1.3440615729605818 1.02297525941492 0.7105837189537056 1.290664183015255 1.2245652028631815 0.8390895380645184 0.7918702101598195 1.0396971553849685 1.0 18.85830309405092 -4.722665066020471 3.7961428106075017 0.9838492203706954 1.4277955659336647 0.4877839055929357 0.17010572000806562 0.19042936247551268 5.665820848319789 0.04788460666155907 0.13532179365958596 1.8938035834147997e-05 4.722665066020471 0.4439463455629693 ADLDVS(ph)GPKVDIDVPDVNIEGPDAK ddPTM_KYSE-520_SHP099_60min_R1 8 ADLDVSGPKVDIDVPDVNIEGPDAK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ADLDVS(1)GPKVDIDVPDVNIEGPDAK;ADLDVS(1)GPKVDIDVPDVNIEGPDAK;ADLDVS(1)GPKVDIDVPDVNIEGPDAK;ADLDVS(1)GPKVDIDVPDVNIEGPDAK;ADLDVS(1)GPKVDIDVPDVNIEGPDAK;ADLDVS(1)GPKVDIDVPDVNIEGPDAK;ADLDVS(1)GPKVDIDVPDVNIEGPDAK;ADLDVS(1)GPKVDIDVPDVNIEGPDAK 305.23 3.8817999999999996e-50 4210870000.0 2616792.0 2952772.0 2594734.0 2096255.0 2363419.0 2545803.0 2205718.0 2836974.0 3867660.0 2574547.0 True False 2471633.331314478 2810916.4009188693 2761994.7053611916 2295482.444937955 2549406.629285374 2529913.6991593256 2428693.501173204 2827133.1993487105 3165390.4397743605 2551738.5165472575 0.9686076043006282 1.1015691391147333 1.0823972313191519 0.8995758891643643 0.9990861574386397 0.9914470792181861 0.9517799278507011 1.1079243351211738 1.240483858062946 1.0 21.28304906919172 -7.39542013233013 5.69880947379856 1.1366491741864353 1.0026031303904737 0.3176724682769745 0.07762026687831346 0.252507726867027 10.545864107389738 0.04378322444866892 0.020404107431094345 4.023276380957127e-08 7.39542013233013 -0.13404604379596163 ADLDVSGPK ddPTM_KYSE-520_SHP099_60min_R1 1 ADLDVSGPK 9 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 91.867 0.032522 0.0 116710.0 426310.0 227920.0 130520.0 343570.0 214560.0 239260.0 272890.0 448300.0 161790.0 False True 110235.86364438302 405829.4276956447 242612.08788489373 142924.5815577311 370607.00435410516 213220.85145300906 263446.73575257655 271943.4082830047 366900.0207233435 160356.66647071546 0.6874417264374502 2.530792368209761 1.5129529269006092 0.8912917978613141 2.3111418596481355 1.3296662754706723 1.6428798474723065 1.6958659360299646 2.2880247438315715 1.0 17.290924806291343 -5.763675828668215 24.99983181235633 1.723557270051096 1.493655950335689 0.05295919776807123 0.5864033545321772 256.8032176450692 2870648.8159848484 0.17396354106494455 0.20691725169006006 1.7231543127195271e-06 5.763675828668215 -0.22990131971540695 ADLES(ph)PQRK ddPTM_KYSE-520_SHP099_60min_R1 1 ADLESPQRK 9 1 A0A087X1K6;Q9Y2Y9 A0A087X1K6 KLF13 Krueppel-like factor 13 1 ADLES(1)PQRK 67.93 0.026558 0.0 425770.0 363400.0 291160.0 342590.0 353870.0 323430.0 319330.0 374200.0 408190.0 338560.0 True False 402151.6893485477 345941.7185254792 309928.6394724718 375149.65059656097 381717.55575512175 321411.35339973326 351610.9927604704 372901.98753893666 334072.9856325265 335560.62179569463 1.1984472051473218 1.0309365761519689 0.9236144509863591 1.1179787681552515 1.1375516999355475 0.9578339427306934 1.0478315091886676 1.1112805356701754 0.995566714129902 1.0 18.356213899173653 -6.254780131750371 24.980459571882417 1.031040634681395 1.0721175437622337 0.11617198605915147 0.07771397763230312 1797.2753168631998 6742020.366730944 0.027107585705018793 0.026600188137174595 5.561857635884464e-07 6.254780131750371 0.04107690908083872 ADLIAYLK ddPTM_KYSE-520_SHP099_60min_R1 2 ADLIAYLK 8 0 P99999;C9JFR7 P99999 CYCS Cytochrome c 0 ; 135.84 0.0053994 876550000.0 1341720.0 1579370.0 1315290.0 1858090.0 1499420.0 1738860.0 1545740.0 1582250.0 1844090.0 1197260.0 False True 1267292.1169474914 1503494.6945172998 1400075.697938409 2034682.314944869 1617415.8234672209 1728007.1297426324 1701998.4841686352 1576761.5440499259 1509249.7417258779 1186653.2078541857 1.0679549076002788 1.267004281087358 1.1798524528241516 1.7146393752427187 1.3630063212755976 1.4562022992946457 1.434284652755748 1.3287467084854299 1.2718540949761055 1.0 20.178466947093455 -8.216314617376165 1.9258315744386116 1.0004360958115492 1.3625436198237921 0.29252141355131434 0.1636652914071925 1.0849167804020636 6.918128283825464 0.16336713930336016 0.04560227156571145 6.076946075820285e-09 8.216314617376165 0.3621075240122429 ADLIAYLKK ddPTM_KYSE-520_SHP099_60min_R1 1 ADLIAYLKK 9 1 P99999;C9JFR7 P99999 CYCS Cytochrome c 0 123.88 0.010181 0.0 151880.0 145170.0 117140.0 166820.0 120710.0 105450.0 113630.0 111490.0 179940.0 70921.0 False True 143454.91363472617 138195.8152953875 124691.03183062695 182674.52264373802 130209.19025405029 104791.84743530856 125116.82932193117 111103.26721196166 147267.43191826568 70292.69511570306 2.0408224979650695 1.9660053589909259 1.7738832125497996 2.5987696494358685 1.8523857996869175 1.4907928521280807 1.7799407053035396 1.580580557184266 2.0950602573405503 1.0 16.101087150384565 -5.998458673927436 24.99995904808304 1.6412679097297571 2.0830928889181517 0.34814853379546085 0.32244957585109413 64.06531969701135 1039089.8984875956 0.09644210193823471 0.10857305541761397 1.0035553397178622e-06 5.998458673927436 0.4418249791883946 ADLIAYLKKATNE ddPTM_KYSE-520_SHP099_60min_R1 1 ADLIAYLKKATNE 13 2 P99999 P99999 CYCS Cytochrome c 0 113.35 0.0015647 153630000.0 70973.0 64102.0 54367.0 79956.0 56071.0 62210.0 60707.0 72707.0 78611.0 31445.0 False True 67035.98620883208 61022.44370093638 57871.58381027564 87554.99420035194 60483.46869965083 61821.72431437218 66843.85600322516 72454.79638694132 64337.22402204503 31166.421763839822 2.150904159508268 1.9579547553879404 1.8568568521850626 2.8092732256461908 1.9406613039494156 1.9836003241828524 2.1447395055398792 2.3247710929396925 2.064312178971117 1.0 14.92770490731043 -8.05102163231292 22.11987443139942 0.9999999971456712 2.1433891556807665 0.6394078737831318 0.2568028496847913 2401.0676189374453 1040955.8111222087 0.24824800913809036 0.06409736036771124 8.891568276388033e-09 8.05102163231292 1.1433891585350953 ADLINNLGTIAK ddPTM_KYSE-520_SHP099_60min_R1 2 ADLINNLGTIAK 12 0 P08238;P07900;P07900-2;Q14568;Q58FF8 P08238;P07900;Q58FF8 HSP90AB1;HSP90AA1;HSP90AA2P;HSP90AB2P Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-beta 2 0 ; 251.81 5.8437e-15 1336440000.0 1347850.0 1913840.0 1444750.0 1095930.0 1934370.0 1988700.0 1608080.0 1514390.0 1621160.0 1739760.0 False True 1273082.0736276398 1821896.2536675953 1537880.8966817309 1200086.8576966322 2086593.9139402453 1976287.785629191 1770640.4197484043 1509136.9345512816 1326798.2101179021 1724347.0799127982 0.7382980424637137 1.056571658276436 0.8918627314632637 0.6959659523750413 1.2100776799794657 1.1461078855012956 1.0268468804075959 0.875193255540874 0.7694496227435833 1.0 20.71761876142613 -4.245272185446388 23.231315310959516 0.9644462878162933 0.7382975779377624 0.16545622028069162 0.15176316493861497 2319.98778317569 3333541.6984466542 0.04026955982673033 0.9226862896718026 5.6849652525710884e-05 4.245272185446388 -0.22614870987853086 ADLNQGIGEPQS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 8 ADLNQGIGEPQSPSR 15 0 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ADLNQGIGEPQS(0.999)PS(0.001)R;ADLNQGIGEPQS(0.957)PS(0.043)R;ADLNQGIGEPQS(0.999)PS(0.001)R;ADLNQGIGEPQS(0.998)PS(0.002)R;ADLNQGIGEPQS(0.999)PS(0.001)R;ADLNQGIGEPQS(0.991)PS(0.009)R;ADLNQGIGEPQS(1)PSR;ADLNQGIGEPQS(1)PSR 355.2 2.3441999999999996e-67 17532120000.0 8277720.0 8057160.0 6346200.0 5406170.0 5616250.0 7811710.0 6337120.0 7347950.0 8224160.0 7994600.0 True False 7818538.370374274 7670081.939556277 6755286.20627902 5919970.771375716 6058216.92290871 7762954.220283304 6977737.933931151 7322461.676474427 6730859.858202309 7923774.063704682 0.9867189936910941 0.9679834227845471 0.8525339253704886 0.7471150393462749 0.7645620476054124 0.9797041356645917 0.8806078868266948 0.9241128807565827 0.8494512594741203 1.0 22.9177563135319 -8.919660134098121 12.828871689658733 0.9999999992384959 0.8816172974386363 0.1603603286786911 0.07975379676326015 0.0 0.0 0.08409401969030615 0.0203957956274061 1.2032056591265832e-09 8.919660134098121 -0.11838270179985966 ADLNQGIGEPQS(ph)PSRR ddPTM_KYSE-520_SHP099_60min_R1 9 ADLNQGIGEPQSPSRR 16 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 ADLNQGIGEPQS(0.999)PS(0.001)RR;ADLNQGIGEPQS(0.874)PS(0.126)RR;ADLNQGIGEPQS(0.928)PS(0.072)RR;ADLNQGIGEPQS(0.5)PS(0.5)RR;ADLNQGIGEPQS(0.966)PS(0.034)RR;ADLNQGIGEPQS(0.868)PS(0.132)RR;ADLNQGIGEPQS(0.5)PS(0.5)RR;ADLNQGIGEPQS(0.974)PS(0.026)RR;ADLNQGIGEPQS(0.926)PS(0.074)RR 265.51 2.3393e-29 20185010000.0 16866530.0 15123040.0 14291800.0 12832780.0 13361260.0 14949760.0 13589790.0 14283770.0 17059980.0 15425260.0 True False 15930909.95830603 14396506.458254158 15213072.295688506 14052403.55288399 14412715.146829866 14856453.002508083 14963578.596769212 14234222.935726972 13962317.679098427 15288604.197070688 1.042012060287257 0.9416494974088311 0.9950595946883984 0.9191423475778413 0.9427096784670086 0.9717337705265857 0.978740662253278 0.9310348251709115 0.9132499932056336 1.0 23.865953363265746 ADPALLNNHS(ph)NLK ddPTM_KYSE-520_SHP099_60min_R1 1 ADPALLNNHSNLK 13 0 Q8N111 Q8N111 CEND1 Cell cycle exit and neuronal differentiation protein 1 1 ADPALLNNHS(1)NLK 51.013000000000005 0.051108999999999995 488130000.0 738660.0 696330.0 636290.0 547550.0 591050.0 656310.0 545250.0 628280.0 763400.0 606280.0 True False 697685.0573177969 662877.2615873616 677306.2714999961 599588.9873730898 637562.2723855218 652213.7258441662 600369.1911271936 626100.6433216546 624785.8037479375 600908.8308787018 1.1610497657316508 1.1031245132777365 1.1271364917529656 0.9978035877694093 1.0609966764063397 1.0853788334087917 0.9991019606905776 1.0419228527663926 1.0397347678088218 1.0 19.19678659812469 -1.0000000004103589 0.35232978379912216 1.0210697151684431 2.7409889758770425 0.6437799846054634 0.032202466048097324 39.41442268800686 0.5545676536675018 0.026911049014553566 45.12940908469197 0.09999999990551138 1.0000000004103589 1.7199192607085994 ADPSLLGFSVNAS(ph)SER ddPTM_KYSE-520_SHP099_60min_R1 6 ADPSLLGFSVNASSER 16 0 I1E4Y6;Q6Y7W6;Q6Y7W6-3;Q6Y7W6-4;Q6Y7W6-5 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ADPSLLGFSVNAS(0.957)S(0.043)ER;ADPSLLGFSVNAS(0.956)S(0.044)ER;ADPSLLGFSVNAS(0.986)S(0.014)ER;ADPSLLGFSVNAS(0.935)S(0.065)ER;ADPSLLGFSVNAS(0.965)S(0.035)ER;ADPSLLGFSVNAS(0.906)S(0.094)ER 348.45 5.352e-59 2136470000.0 687888.0 738957.0 591138.0 513485.0 546970.0 554682.0 486975.0 611158.0 736050.0 627422.0 True False 649729.4813692697 703456.39652293 629243.7013342419 562286.460015105 590013.4271664149 551220.0238891594 536203.1854180006 609038.0355433499 602401.8743105446 621863.5292069298 1.0448103978663577 1.1312070309382134 1.011867832379114 0.9041959105275007 0.9487828107862608 0.8864003081064057 0.8622521827286238 0.9793757101659645 0.9687042992837915 1.0 19.246238483508854 -5.019048948040033 4.082099394218072 0.9309512840071882 1.087093601952076 0.6485509684716171 0.0449787917427045 0.11942470716650856 4.576225200704921 0.012481926950643145 0.02503383618721388 9.570861948758386e-06 5.019048948040033 0.15614231794488787 ADQEQQDPLEYLQS(ph)DEEDDEKR ddPTM_KYSE-520_SHP099_60min_R1 2 ADQEQQDPLEYLQSDEEDDEKR 22 1 Q7RTV3 Q7RTV3 ZNF367 Zinc finger protein 367 1 ADQEQQDPLEYLQS(1)DEEDDEKR;ADQEQQDPLEYLQS(1)DEEDDEKR 200.0 3.5745e-14 1181110000.0 237430.0 234634.0 220440.0 230910.0 253070.0 204404.0 214620.0 205820.0 266140.0 204340.0 True False 224259.28459502955 223361.83044718576 234649.91511647095 252855.6169743772 272985.16922866774 203128.23881618626 236315.88408934997 205106.05845874906 217815.68484343207 202529.7065741146 1.1072908186580674 1.1028595963794958 1.1585950480336185 1.2484865615595315 1.3478771773600056 1.0029552812384717 1.1668208485892984 1.0127208592172214 1.0754752402888792 1.0 17.627774009021152 -6.298437991114173 24.99987837603099 1.059591146658832 1.1891817248972463 0.4347574876538116 0.0803122569219352 660.0767559845286 446010.4479201453 0.030113275819322348 0.026558039375553157 5.029930784456091e-07 6.298437991114173 0.12959057823841436 ADQSFTS(ph)PPPRDFLLDIAR ddPTM_KYSE-520_SHP099_60min_R1 2 ADQSFTSPPPRDFLLDIAR 19 1 D6RIE8;Q16594;D6RHW1;D6RIY1;D6RGK3;D6RIV9;Q9HBM6 D6RIE8 TAF9;TAF9B Transcription initiation factor TFIID subunit 9;Transcription initiation factor TFIID subunit 9B 1 ADQS(0.26)FT(0.327)S(0.413)PPPRDFLLDIAR;ADQS(0.042)FT(0.178)S(0.78)PPPRDFLLDIAR 58.903999999999996 0.019929 285110000.0 169376.0 173686.0 190342.0 124337.0 139768.0 146580.0 112171.0 129867.0 198595.0 147853.0 True False 159980.3756373148 165341.86385199902 202611.74987796808 136153.9510967179 150766.94642886327 145665.13984890972 123510.33936346343 129416.52168818569 162535.15417254608 146543.13744789324 1.0916947625350213 1.128281178712924 1.3826082435966085 0.929104927517541 1.0288229735935053 0.9940086065149539 0.8428258157594063 0.8831291859996016 1.1091283904736868 1.0 17.160965883257795 -5.289880801185163 24.912575086473797 0.9629102413617329 1.1936034152680095 0.5270865656105227 0.10018497998164981 521.5478117275971 456836.02482904616 0.028700412450003578 0.042579379610777915 5.130021660225374e-06 5.289880801185163 0.23069317390627664 ADRDQS(ph)PFSK ddPTM_KYSE-520_SHP099_60min_R1 10 ADRDQSPFSK 10 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 ADRDQS(0.997)PFS(0.003)K;ADRDQS(0.991)PFS(0.009)K;ADRDQS(0.926)PFS(0.074)K;ADRDQS(0.997)PFS(0.003)K;ADRDQS(0.998)PFS(0.002)K;ADRDQS(0.997)PFS(0.003)K;ADRDQS(0.996)PFS(0.004)K;ADRDQS(0.994)PFS(0.006)K;ADRDQS(0.945)PFS(0.055)K;ADRDQS(1)PFSK 159.93 0.00012207 48092900000.0 53012750.0 48813170.0 47978440.0 43264080.0 46190460.0 44858400.0 45091030.0 45164170.0 55155510.0 42683550.0 True False 50072027.079202935 46468112.04313813 51071207.01061817 47375885.155380055 49825386.4142333 44578422.086221375 49649271.358444706 45007506.035666466 45140659.74125943 42305406.95429939 1.1835845742671491 1.0983965263195676 1.2072028302620532 1.1198541407853155 1.1777545709005328 1.0537287144968825 1.1735916265284614 1.0638712466301536 1.0670186860517106 1.0 25.33433872679188 -7.730404056176603 0.5084645730383519 0.9957339831266897 1.1583081084902753 0.5542011265267082 0.04366484654746227 0.6474366799680059 0.42593032058506725 0.04458235084294376 0.024239600092232954 1.8603555053668887e-08 7.730404056176603 0.16257412536358562 ADRDQSPFS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 3 ADRDQSPFSK 10 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 ADRDQS(0.18)PFS(0.82)K;ADRDQS(0.017)PFS(0.983)K;ADRDQS(0.097)PFS(0.903)K 190.85 4.8903e-06 7796540000.0 8061750.0 7134370.0 7152890.0 6614810.0 6851720.0 6768380.0 6614730.0 6860240.0 8461400.0 6622110.0 True False 7614548.656799801 6791624.156292315 7613976.734428647 7243479.5535848625 7390911.383045984 6726136.029816914 7283411.461943653 6836443.428632047 6925023.054536025 6563443.257323626 1.1601454234106967 1.0347654257106709 1.1600582858597601 1.1036096861967135 1.1260722601355702 1.0247877167692052 1.1096936739441865 1.0415940476066128 1.0550899555365152 1.0 22.64602143706621 -7.467808256862512 0.39187339021983963 0.996408771025008 1.1224350204214126 0.4356817261316577 0.04111773381955877 1.0802509817836141 0.4830700989173471 0.05101658248911005 0.039561197967485966 3.405585147635546e-08 7.467808256862512 0.1260262493964046 ADRGEAERGS(ph)GGS(ph)S(ph)GDELREDDEPVK ddPTM_KYSE-520_SHP099_60min_R1 1 ADRGEAERGSGGSSGDELREDDEPVK 26 3 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 3 ADRGEAERGS(1)GGS(1)S(1)GDELREDDEPVK 74.876 0.0040583 822370000.0 635310.0 587170.0 510460.0 481120.0 461270.0 549920.0 434690.0 497270.0 781290.0 457910.0 True False 600068.087840914 558961.4718398615 543365.0683648775 526845.5001459975 497569.3247327134 546487.7452975328 478632.707365575 495545.08643369057 639427.4307181371 453853.2736485893 1.3221631806616345 1.2315907018721994 1.197226284161598 1.1608278065521342 1.0963219913182176 1.204106650821844 1.0545978957423408 1.0918618752045897 1.4088857960144066 1.0 18.791866438047435 -4.36210659092956 1.1075557765457464 1.1451377042196178 1.3865444276659054 0.22387178407371477 0.10397710296595594 2.2262113810885613 2.575356119621305 0.03213110205137582 0.6046168743875152 4.3440359337735854e-05 4.36210659092956 0.24140672344628755 ADRPSSLPLDFNDEFS(ph)DLDGVVQQR ddPTM_KYSE-520_SHP099_60min_R1 6 ADRPSSLPLDFNDEFSDLDGVVQQR 25 1 Q96HH9-4;D6REP5;B7Z4W8;E9PD09;Q96HH9-5;Q96HH9;Q96HH9-2;Q96HH9-3 Q96HH9-4 GRAMD3 GRAM domain-containing protein 3 1 ADRPSSLPLDFNDEFS(1)DLDGVVQQR;ADRPSSLPLDFNDEFS(1)DLDGVVQQR;ADRPSSLPLDFNDEFS(1)DLDGVVQQR;ADRPSSLPLDFNDEFS(1)DLDGVVQQR;ADRPSSLPLDFNDEFS(1)DLDGVVQQR;ADRPSSLPLDFNDEFS(1)DLDGVVQQR 291.45 7.876599999999999e-49 929071000.0 530922.0 634015.0 429046.0 556553.0 481064.0 488218.0 467333.0 597244.0 828867.0 443429.0 True False 501470.6982932322 603555.9677240829 456702.99165787146 609447.6297862383 518920.9999202591 485170.8503667282 514575.58037055447 595172.2999617968 678365.6468367064 439500.56404254196 1.1410012621615016 1.3732768899601708 1.0391408544669454 1.3866822471864817 1.1807061068300007 1.1039140562280725 1.1708189305548775 1.3542014474051653 1.5434920961126304 1.0 18.74550549132052 -7.265293780186836 24.174294478969433 1.3366350903717426 1.2027054299074873 0.0599931117390714 0.16161216210062937 448.8478289198431 2815068.0462650564 0.07969628600380664 0.04056750460051419 5.428829719634196e-08 7.265293780186836 -0.13392966046425525 ADS(ph)DSEDKGEESKPK ddPTM_KYSE-520_SHP099_60min_R1 7 ADSDSEDKGEESKPK 15 2 P83916;K7ELA4;B5MD17;J3KS05;C9JWS9 P83916 CBX1 Chromobox protein homolog 1 1 ADS(0.986)DS(0.014)EDKGEESKPK;ADS(0.993)DS(0.007)EDKGEESKPK;ADS(0.939)DS(0.06)EDKGEES(0.001)KPK;ADS(0.976)DS(0.024)EDKGEESKPK;ADS(0.841)DS(0.156)EDKGEES(0.003)KPK;ADS(0.954)DS(0.046)EDKGEESKPK;ADS(0.998)DS(0.002)EDKGEESKPK 130.09 3.5664e-05 11102280000.0 10258960.0 9007510.0 7998460.0 8953700.0 9038450.0 8605230.0 8865780.0 9178970.0 10131020.0 8295480.0 True False 9689875.038070252 8574775.699051853 8514053.52958849 9804656.955971943 9749724.593254248 8551521.567622 9762019.564074535 9147130.295457695 8291482.150231117 8221988.500985776 1.1785318158628517 1.0429077707933767 1.0355224321425038 1.192492175681882 1.1858110227331629 1.0400794852238866 1.1873063995290332 1.1125204437297618 1.0084521705712686 1.0 22.97105592351958 -7.760632177889839 5.297674072070414 1.001081224438187 1.1207577380300278 0.3754939054590821 0.06081708226914536 0.182905198377937 15.163057876465976 0.05212839960723272 0.01582878420658559 1.7352730506861508e-08 7.760632177889839 0.11967651359184073 ADS(ph)LLAVVK ddPTM_KYSE-520_SHP099_60min_R1 8 ADSLLAVVK 9 0 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 ADS(1)LLAVVK;ADS(1)LLAVVK;ADS(1)LLAVVK;ADS(1)LLAVVK;ADS(1)LLAVVK;ADS(1)LLAVVK;ADS(1)LLAVVK;ADS(1)LLAVVK 162.38 4.557e-05 2503625000.0 4388850.0 4317540.0 3519959.0 2860596.0 3076397.0 3771741.0 3165762.0 4119140.0 4539220.0 4107780.0 True False 4145391.7415444297 4110118.897640338 3746861.189273528 3132466.1837704545 3318491.941595473 3748200.165362715 3485788.117819727 4104851.6647545034 3715012.072424306 4071388.265004481 1.0181764724273643 1.0095128811390368 0.9202908063275571 0.7693852759500958 0.8150762652924777 0.9206196809035085 0.8561669609802961 1.0082191620086092 0.9124681387812118 1.0 21.957089378934402 -9.70243561096246 13.588651357277671 0.9999999955886753 0.9114417048244722 0.09355447146795237 0.07941118441048127 0.0 0.0 0.08464491909166778 0.020529408358047486 1.9841038007166952e-10 9.70243561096246 -0.08855829076420307 ADS(ph)LLEDITDIPK ddPTM_KYSE-520_SHP099_60min_R1 10 ADSLLEDITDIPK 13 0 Q9BQL6-2;Q9BQL6;Q9BQL6-4;G3V1L6 Q9BQL6-2 FERMT1 Fermitin family homolog 1 1 ADS(1)LLEDITDIPK;ADS(1)LLEDITDIPK;ADS(1)LLEDITDIPK;ADS(1)LLEDITDIPK;ADS(1)LLEDITDIPK;ADS(1)LLEDITDIPK;ADS(1)LLEDITDIPK;ADS(1)LLEDITDIPK;ADS(1)LLEDITDIPK;ADS(1)LLEDITDIPK 246.86 4.4606e-16 529115700.0 776744.0 792722.0 637427.0 605515.0 627108.0 770945.0 630141.0 839410.0 886155.0 840891.0 True False 733656.4619192241 754638.4452200192 678516.5643392595 663062.9635452776 676457.8318435671 766133.2462874727 693841.8018635125 836498.2826297662 725251.5901496636 833441.3599432976 0.8802736427301109 0.9054487591920808 0.8141143419921251 0.7955724246639122 0.8116441832087494 0.9192407325928675 0.8325022433620494 1.0036678317556458 0.8701891038848918 1.0 19.668721170714964 -7.249884280802021 24.94929683829582 0.952696351955655 0.8508618982998343 0.4739034545847661 0.05142570622441318 646.0265238419152 1394877.496483663 0.024760705103964036 0.014139382104031258 5.624911828564549e-08 7.249884280802021 -0.10183445365582078 ADS(ph)LPRPQGITVQFAGR ddPTM_KYSE-520_SHP099_60min_R1 3 ADSLPRPQGITVQFAGR 17 1 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 ADS(1)LPRPQGITVQFAGR;ADS(1)LPRPQGITVQFAGR;ADS(1)LPRPQGITVQFAGR 158.73 3.3651e-08 938180000.0 265734.0 224614.0 205299.0 218573.0 214779.0 237482.0 209988.0 246092.0 268311.0 205580.0 True False 250993.2052924039 213823.20628751267 218532.9020300139 239346.11220363126 231680.8853746553 235999.7867485249 231215.63632538632 245238.36429030437 219592.4859698883 203758.72113882 1.2318157666557166 1.0493941319048414 1.072508213678512 1.1746545662728503 1.137035431316886 1.1582315860126506 1.1347520981340478 1.203572357146983 1.0777084030689457 1.0 17.636502284330028 -8.004938400135245 18.837750022759394 0.9999999945930088 1.1404298862413582 0.43894185668112407 0.051740894658635565 6.7337578911084774 25690.33631415133 0.04965871282979146 0.01282182410373396 9.8869331991491e-09 8.004938400135245 0.1404298916483494 ADS(ph)PAGPESSR ddPTM_KYSE-520_SHP099_60min_R1 2 ADSPAGPESSR 11 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 ADS(1)PAGPESSR;ADS(1)PAGPESSR 122.55 0.0009599999999999999 238000000.0 973670.0 865840.0 874120.0 799400.0 835330.0 906340.0 767460.0 801340.0 937950.0 794770.0 True False 919658.5841369759 824243.7467476635 930467.1738414493 875374.7356516256 901065.7186224499 900683.1958702471 845042.3464878041 798560.3385741612 767641.923795361 787728.9561217035 1.1674809932909074 1.0463545110817514 1.1812021972919489 1.1112638793442815 1.143877867659896 1.1433922656654154 1.0727577549621594 1.013750138760653 0.9745000711599598 1.0 19.587339783147247 -7.1361962466575966 2.189367704120916 0.9892805001609825 1.130143249111347 0.7489784624257726 0.03534842663521225 0.15573036713747193 1.4347930073308375 0.02104162526244673 0.009952201445114318 7.308087749164605e-08 7.1361962466575966 0.14086274895036455 ADS(ph)PVHMEQQSR ddPTM_KYSE-520_SHP099_60min_R1 3 ADSPVHMEQQSR 12 0 O95402 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 ADS(1)PVHMEQQSR;ADS(0.999)PVHMEQQS(0.001)R;ADS(0.831)PVHMEQQS(0.169)R 129.29 7.409699999999999e-05 1321910000.0 796360.0 1170800.0 1810910.0 1078820.0 757720.0 1253920.0 802460.0 768100.0 891020.0 1110630.0 True False 752184.3232956982 1114553.0105933726 1927644.156158444 1181350.72844094 817348.2531629445 1246093.820161994 883580.4880548862 765435.6403758881 729233.2287863349 1100790.682257066 0.6833127636522287 1.012502220956384 1.7511450516695817 1.0731838009554127 0.7425101486933465 1.1319988806654848 0.8026780225312127 0.6953507626049628 0.6624631190474032 1.0 20.070108732705005 -6.3198571310835785 1.148165003878603 0.7708888864605956 1.1371430960963642 0.1661814308152625 0.28580378914597343 0.819255543601915 2.2288964279899743 0.1628133399154468 0.13909406405296112 4.787875721304063e-07 6.3198571310835785 0.3662542096357686 ADS(ph)PVNGLPK ddPTM_KYSE-520_SHP099_60min_R1 6 ADSPVNGLPK 10 0 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 ADS(1)PVNGLPK;ADS(1)PVNGLPK;ADS(1)PVNGLPK;ADS(1)PVNGLPK;ADS(1)PVNGLPK;ADS(1)PVNGLPK 184.98 4.2193e-06 6042250000.0 11697300.0 11138300.0 9959200.0 8553400.0 9180400.0 10882000.0 9769700.0 11472100.0 12477100.0 10884200.0 True False 11048427.451010562 10603199.349070856 10601185.967283413 9366312.564326528 9902845.25066924 10814081.40152706 10757316.619083598 11432305.96270827 10211573.16209509 10787774.455779472 1.0241618877275884 0.9828903442999096 0.9827037087898982 0.8682339997670784 0.9179692522551638 1.002438588779866 0.9971766338997238 1.0597464759363313 0.9465875657628635 1.0 23.362893928223425 -6.358967252460673 8.789215226965702 1.0049069857164248 0.9534689946624417 0.19329402352756642 0.04662442261262916 0.5954140420384991 49.28862098348729 0.017570144756593346 0.015480596186256492 4.3755509731712475e-07 6.358967252460673 -0.051437991053983056 ADS(ph)RESLKPAAK ddPTM_KYSE-520_SHP099_60min_R1 5 ADSRESLKPAAK 12 2 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ADS(0.947)RES(0.053)LKPAAK;ADS(1)RESLKPAAK;ADS(0.998)RES(0.002)LKPAAK;ADS(0.997)RES(0.003)LKPAAK;ADS(0.847)RES(0.153)LKPAAK 171.91 1.2006e-06 13585200000.0 10657000.0 9345200.0 8294230.0 7471640.0 8953360.0 7214390.0 7267480.0 7568910.0 10624000.0 7535690.0 True False 10065834.965797182 8896242.564568829 8828889.337037208 8181742.419169522 9657938.494350135 7169362.315967906 8002147.802169734 7542655.217806871 8694949.409245603 7468929.649278108 1.3476944406311382 1.1911000614965859 1.182082273045716 1.0954370710882662 1.2930820007500807 0.9598915309988018 1.071391508278989 1.0098709683971772 1.1641493249418935 1.0 22.832470078694794 -1.0000000000102067 0.2877362719915962 1.030565340795053 3.3686902384452213 0.5157678749963874 0.08421852707112061 43.014793952734756 0.6098078318742358 0.08859076286760546 51.04039632921722 0.09999999999764982 1.0000000000102067 2.338124897650168 ADSDS(ph)EDKGEESKPK ddPTM_KYSE-520_SHP099_60min_R1 1 ADSDSEDKGEESKPK 15 2 P83916;K7ELA4;B5MD17;J3KS05;C9JWS9 P83916 CBX1 Chromobox protein homolog 1 1 ADS(0.171)DS(0.827)EDKGEES(0.003)KPK 113.23 0.00013688 2034300000.0 1762600.0 1546400.0 1374000.0 1597200.0 1551800.0 1411200.0 1524100.0 1593400.0 1753900.0 1421500.0 True False 1664825.0643440096 1472108.6228062797 1462570.238477731 1748997.4077843116 1673917.8314657893 1402392.1773419403 1678170.901782586 1587872.867302357 1435435.972220994 1408906.6159102665 1.1816433009425535 1.0448589041901686 1.038088842767477 1.2413863261294427 1.1880970765293088 0.9953762453133792 1.1911157793083065 1.127024920864939 1.0188297478421502 1.0 20.42614456051188 -7.793942475997286 5.24271189772585 1.004172126148207 1.1242528974956985 0.28013248243692235 0.07483104124287523 0.2582096779208422 17.312283799471132 0.06953432866426623 0.019251285810263224 1.6071541127635493e-08 7.793942475997286 0.1200807713474914 ADSEPES(ph)PLNASYVYK ddPTM_KYSE-520_SHP099_60min_R1 1 ADSEPESPLNASYVYK 16 0 Q5T1V6-2;Q5T1V6 Q5T1V6-2 DDX59 Probable ATP-dependent RNA helicase DDX59 1 ADSEPES(1)PLNASYVYK 314.61 3.9333e-47 198740000.0 271670.0 303540.0 202380.0 207750.0 271160.0 262270.0 241190.0 293050.0 328590.0 269960.0 True False 256599.9235392818 288957.4827771709 215425.73861944876 227494.49753768498 292498.7493106477 260633.075645883 265571.838987561 292033.4779483844 268926.33907982067 267568.3644257016 0.9590069591748559 1.0799388911218188 0.8051241000849642 0.8502294283779414 1.0931738882451807 0.9740803110460975 0.992538260483724 1.091435000453786 1.005075243693453 1.0 18.02954802545292 -5.764652395046068 24.99998720189589 1.0263480781980978 0.9262829412587793 0.2995317234988989 0.076725758011379 118.20662273440206 919748.3785960193 0.02482679863390365 0.029337675551212486 1.719283934239738e-06 5.764652395046068 -0.10006513693931851 ADSGPTQPPLSLS(ph)PAPETK ddPTM_KYSE-520_SHP099_60min_R1 9 ADSGPTQPPLSLSPAPETK 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 ADSGPTQPPLSLS(1)PAPETK;ADSGPTQPPLSLS(1)PAPETK;ADSGPTQPPLSLS(1)PAPETK;ADSGPTQPPLSLS(1)PAPETK;ADSGPTQPPLSLS(1)PAPETK;ADSGPTQPPLSLS(1)PAPETK;ADSGPTQPPLSLS(1)PAPETK;ADSGPTQPPLSLS(1)PAPETK;ADSGPTQPPLSLS(1)PAPETK 357.38 9.5714e-78 13106290000.0 12424880.0 13325520.0 8455830.0 7204410.0 7980200.0 13525640.0 10019960.0 14869660.0 16080150.0 15051750.0 True False 11735647.138015779 12685342.017186685 9000906.331606355 7889114.9603151465 8608196.338873096 13441221.463678584 11032875.342185838 14818080.620064741 13160400.107594194 14918403.205084285 0.7866557148700872 0.8503149997221848 0.6033424762603808 0.5288176523896664 0.5770186138915571 0.9009825836519643 0.7395480059438108 0.9932752464429067 0.8821587623472361 1.0 23.830589788853633 -6.869972484215177 1.3427507194159543 0.9551614532027703 0.6778275008818467 0.5010583227005294 0.11405013370795046 0.4109211978113289 1.4654209684468176 0.0826305077885151 0.04349445659848259 1.3490483521286305e-07 6.869972484215177 -0.2773339523209236 ADTSQEICS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 ADTSQEICSPR 11 0 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ADT(0.019)S(0.077)QEICS(0.905)PR;ADTSQEICS(1)PR 94.551 0.038721 490970000.0 1724850.0 1758590.0 1584450.0 1508190.0 1544270.0 1769910.0 1574830.0 1738940.0 2166130.0 1712750.0 True False 1629169.132096771 1674104.6967025946 1686586.1822096345 1651527.9241461428 1665795.2633056256 1758863.3351752223 1734029.185259674 1732908.0230116458 1772815.3956936342 1697576.3674993382 0.9597029996928289 0.9861734227419063 0.9935259552971433 0.9728740077708384 0.9812785422781723 1.0361026277516836 1.021473447945104 1.0208129991608883 1.04432143945614 1.0 20.69504504661266 -6.251783282774502 24.22816927968452 1.0256511242969306 0.9796243381029194 0.7403591789618797 0.013557152685316452 221.1512212120972 554892.0094633128 0.004347211515693502 0.004288196845607749 5.600369957578981e-07 6.251783282774502 -0.04602678619401124 ADVGRLS(ph)PEVK ddPTM_KYSE-520_SHP099_60min_R1 8 ADVGRLSPEVK 11 1 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 ADVGRLS(1)PEVK;ADVGRLS(1)PEVK;ADVGRLS(1)PEVK;ADVGRLS(1)PEVK;ADVGRLS(1)PEVK;ADVGRLS(1)PEVK;ADVGRLS(1)PEVK;ADVGRLS(1)PEVK 164.93 1.1380999999999998e-05 12269600000.0 23873810.0 20507640.0 18350140.0 19756960.0 21317860.0 21670140.0 21385670.0 23060330.0 24356280.0 21728420.0 True False 22549482.168039653 19522422.191804793 19533019.385662075 21634655.538253374 22995454.299968608 21534888.61812969 23547542.227626022 22980339.097551465 19933793.523853593 21535923.103254963 1.0470636461657639 0.9065050101731721 0.9069970807385467 1.0045845462265552 1.0677719357427056 0.9999519646722217 1.0934076108428814 1.0670700757692708 0.9256066446875815 1.0 24.360241827955967 -5.475471633086049 6.89885751696173 1.0315934219982532 0.9494892908504642 0.23615979720075087 0.05727180806689911 0.30069543091390677 35.86381180182563 0.016133910370751885 0.023677543453980644 3.3460187240808205e-06 5.475471633086049 -0.08210413114778903 ADVPVEKYDGES(ph)DKEQFDDDQK ddPTM_KYSE-520_SHP099_60min_R1 3 ADVPVEKYDGESDKEQFDDDQK 22 2 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 ADVPVEKYDGES(1)DKEQFDDDQK;ADVPVEKYDGES(1)DKEQFDDDQK;ADVPVEKYDGES(1)DKEQFDDDQK 247.85 2.5826000000000002e-27 2612320000.0 2491700.0 2634740.0 2402560.0 2072100.0 2195220.0 2086080.0 1754740.0 1994170.0 3035610.0 2167190.0 True False 2353480.4339191974 2508163.1355746323 2557432.8618319184 2269031.761000417 2367971.3249067673 2073060.000927915 1932126.2438120702 1987252.689712777 2484419.7455007564 2147990.3826483046 1.0956661877682803 1.1676789411329966 1.190616532779259 1.0563509871039916 1.102412442828186 0.9651160534396778 0.8995041409030469 0.9251683367700415 1.1566251718676974 1.0 21.03455610317978 -5.937656264368031 1.7432016304022617 0.9805616640176584 1.1440647568959335 0.44519152240323534 0.07352985648661509 0.3169222202649477 1.9676348223052869 0.02821550400682493 0.03265713974169037 1.154366555011683e-06 5.937656264368031 0.16350309287827502 ADVQLFMDDDS(ph)Y(ph)S(ph)HHSGLEYADPEK ddPTM_KYSE-520_SHP099_60min_R1 1 ADVQLFMDDDSYSHHSGLEYADPEK 25 0 E9PCT3;P51636-3;P51636 E9PCT3 CAV2 Caveolin;Caveolin-2 3 ADVQLFMDDDS(0.664)Y(0.741)S(0.708)HHS(0.624)GLEY(0.263)ADPEK 66.87899999999999 0.014480000000000002 139110000.0 123990.0 163800.0 96521.0 153580.0 136600.0 128070.0 129570.0 175620.0 184990.0 116090.0 True False 117112.02753206296 155930.80213118732 102742.89809906037 168176.1970244892 147349.6428523175 127270.66762484571 142668.2000813396 175010.81521001615 151400.47921840582 115061.5329166533 1.0178208525771595 1.3551948959704747 0.8929387215228904 1.4616196461271758 1.2806160244627771 1.1061096128193972 1.2399295964941093 1.52101932569235 1.3158218509749493 1.0 16.81204607032194 -5.271592662798922 24.99872706687316 1.2884592701592552 1.1153058196592305 0.17843211954802052 0.17893894427499238 1228.25568207292 3024125.9547008798 0.049501699286287434 0.07440180731645037 5.350659777848982e-06 5.271592662798922 -0.17315345050002473 ADVQLFMDDDS(ph)Y(ph)SHHSGLEYADPEK ddPTM_KYSE-520_SHP099_60min_R1 1 ADVQLFMDDDSYSHHSGLEYADPEK 25 0 E9PCT3;P51636-3;P51636 E9PCT3 CAV2 Caveolin;Caveolin-2 2 ADVQLFMDDDS(0.524)Y(0.534)S(0.481)HHS(0.43)GLEY(0.031)ADPEK 75.26100000000001 0.0085375 805220000.0 116030.0 163820.0 89380.0 192110.0 131060.0 142270.0 150850.0 155250.0 175080.0 134270.0 True False 109593.58459992941 155949.8413011667 95141.57781305638 210368.0766400225 141373.67637060565 141382.04015762298 166099.39015412587 154711.4739856223 143289.88540763562 133080.47226047923 0.8235136435751536 1.1718461668510247 0.7149176449181454 1.580758416819169 1.0623172128056029 1.0623800603960514 1.2481124189957675 1.1625407646796184 1.0767160874449968 1.0 17.021939365447434 -5.222836257489081 24.99992975420843 1.1714098240598028 0.9302679677943766 0.2954333866849814 0.18756270849262668 743.7858941409032 481685.27129329095 0.04849179409122881 0.08398870628104685 5.986372573593285e-06 5.222836257489081 -0.24114185626542617 ADVQLFMDDDSY(ph)SHHS(ph)GLEYADPEK ddPTM_KYSE-520_SHP099_60min_R1 1 ADVQLFMDDDSYSHHSGLEYADPEK 25 0 E9PCT3;P51636-3;P51636 E9PCT3 CAV2 Caveolin;Caveolin-2 2 ADVQLFMDDDS(0.324)Y(0.492)S(0.39)HHS(0.795)GLEYADPEK 118.55 0.00013236 306690000.0 242190.0 288290.0 201620.0 345150.0 267210.0 226220.0 264410.0 295330.0 329450.0 235520.0 True False 228755.23790620462 274440.11566788785 214616.74780340586 377952.9522268682 288237.9067830732 224808.07706795196 291139.14319292293 294305.56916053995 269630.1847586564 233433.4760317871 0.9799590092856029 1.1756673478593824 0.9193914748293474 1.6191034750105917 1.2347753701950754 0.9630498628111908 1.2472039064066283 1.260768481725662 1.1550622016267296 1.0 17.832651943116637 ADVQLFMDDDSYS(ph)HHS(ph)GLEYADPEK ddPTM_KYSE-520_SHP099_60min_R1 4 ADVQLFMDDDSYSHHSGLEYADPEK 25 0 E9PCT3;P51636-3;P51636 E9PCT3 CAV2 Caveolin;Caveolin-2 2 ADVQLFMDDDS(0.007)Y(0.002)S(0.991)HHS(1)GLEYADPEK;ADVQLFMDDDS(0.397)Y(0.188)S(0.5)HHS(0.911)GLEY(0.004)ADPEK;ADVQLFMDDDS(0.05)YS(0.95)HHS(0.991)GLEY(0.009)ADPEK;ADVQLFMDDDS(0.031)Y(0.001)S(0.968)HHS(1)GLEYADPEK 181.32 2.3101999999999997e-11 1840200000.0 1039130.0 1355370.0 941280.0 1531470.0 1003200.0 1137670.0 1249940.0 1352620.0 1569340.0 1033960.0 True False 981487.3874457004 1290255.990748153 1001956.4149012486 1677020.4483467564 1082146.132572804 1130569.37953274 1376296.1334388314 1347928.076923882 1284387.4158420074 1024799.9188087075 0.9577356217852199 1.2590320969658435 0.9777093035545772 1.6364369449757876 1.0559584487777474 1.1032098644650417 1.3429900882883807 1.3153085321189322 1.2533055402024824 1.0 19.966910835816723 -3.578524237490017 1.3272372778865036 1.2348947308965925 1.8346045747358205e-14 0.13457968282103716 0.18786137072378664 13.978108214050291 5.838997914287299 0.05216265513972935 36.33464986272121 0.0002639221026277547 3.578524237490017 -1.234894730896574 ADVVPQQADPEFPRAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 ADVVPQQADPEFPRASPR 18 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR;ADVVPQQADPEFPRAS(1)PR 175.71 6.4391e-09 8072550000.0 4339440.0 4310210.0 4237310.0 3334720.0 3623280.0 3619670.0 3277440.0 3787730.0 4825900.0 3915910.0 True False 4098722.6127408203 4103141.041842888 4510453.782535707 3651650.786179875 3908411.5223568454 3597078.296881587 3608755.619931969 3774591.2486928254 3949638.2110389974 3881218.083931875 1.0560402750129934 1.0571786880077076 1.1621232522874323 0.9408517396375119 1.0070064185616239 0.9267910792679704 0.9297997540700192 0.9725274815964396 1.017628519095688 1.0 21.888078069122987 -5.275763891089134 24.99136539037057 0.967497484452916 1.088320536410445 0.6517890195354599 0.040500116500957944 464.35907229794464 810146.4025271625 0.011514881863864129 0.017162661194851204 5.2995147946401036e-06 5.275763891089134 0.12082305195752896 ADWLSHYWMPK ddPTM_KYSE-520_SHP099_60min_R1 1 ADWLSHYWMPK 11 0 P08243-3;P08243-2;P08243 P08243-3 ASNS Asparagine synthetase [glutamine-hydrolyzing] 0 110.53 0.0033464 24403000.0 114530.0 135030.0 104300.0 83665.0 162540.0 139570.0 106010.0 94339.0 108880.0 84188.0 False True 108176.79259010524 128542.95611583792 111023.34488590049 91616.49644520061 175330.9732739072 138698.89185913716 116726.52535789766 94011.76002788811 89110.13664144014 83442.15981727286 1.2964284820407084 1.540503702173215 1.3305425594091371 1.097964106464028 2.101227648683334 1.6622159848554872 1.3988914670175496 1.1266697822031604 1.0679270147917959 1.0 16.34848888061592 -7.244124639519555 2.938344179719017 1.0520439293932757 1.5081367330499842 0.3841964382809614 0.2503427034544186 0.31124298564595543 5.379074495360173 0.16042746943452701 0.07492487430545304 5.700006625474484e-08 7.244124639519555 0.45609280365670846 ADWWTNTAHYNR ddPTM_KYSE-520_SHP099_60min_R1 2 ADWWTNTAHYNR 12 0 Q6P2Q9;I3L0J9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 ; 225.33 7.060800000000001e-11 1601780000.0 1137470.0 1154400.0 626000.0 652160.0 1186120.0 1064560.0 866390.0 728190.0 784340.0 847980.0 False True 1074372.271609772 1098940.8912102724 666352.9616354146 714141.0903209461 1279460.8959003743 1057915.6861615176 953973.1563515601 725664.0788508243 641923.6276023804 840467.5569184561 1.2783030859024695 1.307535171541302 0.7928360305525339 0.8496950113569148 1.5223203862757908 1.2587228114316835 1.1350505424019794 0.8634052235299187 0.7637696688209716 1.0 19.680832605169858 -7.247331473639901 5.321363283347032 0.8578442730515466 1.1614239340761308 0.28413912720511536 0.20904550027104352 0.243994275026396 23.352710490940076 0.11662643396911296 0.061614223337966074 5.6580727390546243e-08 7.247331473639901 0.3035796610245841 AEAEAEAGS(ph)PRPDPR ddPTM_KYSE-520_SHP099_60min_R1 1 AEAEAEAGSPRPDPR 15 1 A0A075B730;P58107 A0A075B730 EPPK1 Epiplakin 1 AEAEAEAGS(1)PRPDPR 59.513000000000005 0.025152 54907000.0 96199.0 84618.0 77601.0 69808.0 76404.0 73224.0 69947.0 76272.0 109700.0 76870.0 True False 90862.6497020479 80552.82426579253 82603.28462599011 76442.53133145944 82416.56012070623 72766.98185493631 77017.92537693489 76007.43023401855 89781.2453119581 76188.99160395512 1.1925955152992345 1.0572764197290003 1.0841892363581567 1.0033277737658253 1.0817384294718482 0.9550852468712664 1.0108799677686866 0.9976169605855876 1.1784018061120707 1.0 16.217294940185518 AEAPAGPALGLPS(ph)PEAESGVDR ddPTM_KYSE-520_SHP099_60min_R1 5 AEAPAGPALGLPSPEAESGVDR 22 0 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 AEAPAGPALGLPS(1)PEAESGVDR;AEAPAGPALGLPS(1)PEAESGVDR;AEAPAGPALGLPS(1)PEAESGVDR;AEAPAGPALGLPS(1)PEAESGVDR;AEAPAGPALGLPS(1)PEAESGVDR 316.97 2.6033999999999997e-54 1333050000.0 1070270.0 1301800.0 925520.0 859710.0 950520.0 1270640.0 971570.0 1285240.0 1335740.0 1371790.0 True False 1010899.9895696506 1239259.5739583627 985180.5000843594 941416.5799187645 1025320.5162810023 1262709.4644400252 1069785.7772094407 1280781.8024172704 1093203.2872652228 1359637.007836472 0.7435072624113471 0.9114635500620416 0.7245908241730136 0.6924028799545531 0.7541134217231611 0.9287107199658509 0.7868171953569738 0.9420027514956508 0.8040405497676082 1.0 20.374790105436375 -6.250685303463105 24.362608708092846 0.8820958500958099 0.7670383850067946 0.3844998909163089 0.07986581184944865 610.7261510020279 1383557.543227515 0.026267482153208118 0.02599179755969035 5.614546674524897e-07 6.250685303463105 -0.11505746508901538 AEAPAGPALGLPS(ph)PEAESGVDRGEPEPMEVEEGELEIVPVRR ddPTM_KYSE-520_SHP099_60min_R1 7 AEAPAGPALGLPSPEAESGVDRGEPEPMEVEEGELEIVPVRR 42 2 Q53F19 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 AEAPAGPALGLPS(0.719)PEAES(0.281)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(1)PEAESGVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(1)PEAESGVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.995)PEAES(0.005)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.995)PEAES(0.005)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(0.967)PEAES(0.033)GVDRGEPEPMEVEEGELEIVPVRR;AEAPAGPALGLPS(1)PEAESGVDRGEPEPMEVEEGELEIVPVRR 331.32 2.5922999999999996e-82 4991360000.0 469243.0 509274.3 435807.0 374659.5 337033.7 460507.30000000005 352614.39999999997 374227.7 576335.8 446483.8 True False 443213.1553772703 484807.99819169054 463899.8165358542 410267.0262345139 363556.334730565 457633.10312419076 388260.1047369103 372929.59145410184 471687.7469632051 442528.3008911406 1.001547594774731 1.0955412280195622 1.0482941217582622 0.927097827208654 0.8215436933602983 1.034132963253724 0.8773678518527566 0.8427248397517527 1.0658928389740152 1.0 18.75541019686339 -5.255111279733596 7.640527385750209 0.9283352321455474 1.0534789573558903 0.28769725484169184 0.07814630667137823 0.1494364451986699 72.70839383184982 0.02093165942037127 0.03419521042484501 5.557618355828874e-06 5.255111279733596 0.1251437252103429 AEAPLPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 AEAPLPSPK 9 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 AEAPLPS(1)PK;AEAPLPS(1)PK;AEAPLPS(1)PK;AEAPLPS(1)PK;AEAPLPS(1)PK;AEAPLPS(1)PK;AEAPLPS(1)PK;AEAPLPS(1)PK;AEAPLPS(1)PK 150.33 0.00027299 43533400000.0 16997710.0 20630700.0 16532730.0 18085810.0 21743420.0 38455000.0 39160600.0 58554700.0 64412500.0 53357700.0 True False 16054813.142205196 19639570.204687968 17598456.2291033 19804679.94470295 23454503.450863417 38214988.080842 43119335.61862547 58351587.412469774 52716813.70698726 52884992.2896625 0.3035797576421969 0.3713637717316438 0.3327684370778152 0.3744858245649058 0.4435001771844467 0.7226055337501096 0.8153416262680265 1.1033676074464671 0.9968199185554554 1.0 25.65635503643499 -6.538999703822453 1.188718240825581 1.0441593888832856 0.3344955006184037 0.9735487088278085 0.048727439294507784 0.06379364500728386 0.18421892740425136 0.027361664998586586 0.019169992442110213 2.8906818537346817e-07 6.538999703822453 -0.7096638882648819 down AEDCWELQIS(ph)PELLAHGR ddPTM_KYSE-520_SHP099_60min_R1 1 AEDCWELQISPELLAHGR 18 0 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 AEDCWELQIS(1)PELLAHGR 47.281000000000006 0.064722 39449000.0 71059.0 81436.0 79612.0 62863.0 69520.0 61908.0 64087.0 77749.0 93636.0 69027.0 True False 67117.21561739534 77523.69232207186 84743.91690370384 68837.48061954982 74990.82848530836 61521.609208393405 70565.53938884629 77479.30686575294 76634.06277147218 68415.47448219337 0.9810239002999835 1.1331309606315616 1.238665923829269 1.0061682848880378 1.096109163210238 0.8992352925127451 1.0314265876678603 1.1324821972245274 1.120127622463802 1.0 16.062035056031334 -4.232037276929877 21.976203237159496 1.0742539149145292 0.9810231571210783 0.08774395994760797 0.08892997046532715 5395.372590406076 4032359.7543477905 0.023391235199789154 1.8029301050047228 5.8608785649840844e-05 4.232037276929877 -0.0932307577934508 AEDGATPS(ph)PSNET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 AEDGATPS(1)PS(0.013)NET(0.987)PK;AEDGATPS(0.996)PS(0.004)NET(1)PK 276.14 7.8753e-36 746680000.0 1247270.0 1040170.0 962540.0 995400.0 969970.0 931050.0 976160.0 1039370.0 1178370.0 991670.0 True False 1178081.446728898 990198.6718729996 1024586.868518452 1090002.516722078 1046301.1206256411 925238.9715945391 1074839.7792035234 1035764.6680607811 964407.712290355 982884.5753075843 1.1985959250202178 1.0074414603191086 1.0424284745722228 1.1089832357792087 1.0645208470162544 0.9413505866698483 1.0935564624840741 1.0538009183190697 0.9812013908027327 1.0 19.906662478582806 -4.254895609363063 24.57091585376543 1.0370153320408366 1.1985960188044482 0.5069056575029246 0.048944438599915624 511.5120425006757 1920590.4042934424 0.012216558232007924 0.1120360330676297 5.5603789510579075e-05 4.254895609363063 0.1615806867636116 AEDGATPS(ph)PSNETPK ddPTM_KYSE-520_SHP099_60min_R1 6 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPS(0.993)PS(0.007)NETPK;AEDGATPS(0.979)PS(0.021)NETPK;AEDGATPS(0.945)PS(0.055)NETPK;AEDGATPS(0.999)PS(0.001)NETPK;AEDGATPS(0.999)PS(0.001)NETPK;AEDGAT(0.001)PS(0.997)PS(0.002)NETPK 301.75 4.015099999999999e-47 1999670000.0 4587560.0 5343570.0 3604350.0 3340260.0 3700510.0 5463670.0 4028840.0 5807490.0 6349070.0 5463260.0 True False 4333078.901725865 5086856.876337914 3836692.1681639003 3657717.3061142135 3991719.083978263 5429569.208884514 4436114.464889281 5787345.172668355 5196238.935030019 5414859.766751968 0.8002199666058951 0.9394254136685053 0.7085487590503732 0.6754962203403925 0.7371786631461821 1.0027164954894794 0.8192482642168637 1.0687894833774831 0.9596257629672492 1.0 22.368492544935943 -6.26100830141162 24.997722459948264 0.9649486143532995 0.7725598550370569 0.5560298378125315 0.08835987001837264 33.51067451708027 1943287.6045601182 0.03190913874771733 0.030062519488567693 5.482664848676704e-07 6.26100830141162 -0.19238875931624255 AEDGATPS(ph)PSNETPKK ddPTM_KYSE-520_SHP099_60min_R1 2 AEDGATPSPSNETPKK 16 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGAT(0.006)PS(0.993)PS(0.001)NETPKK;AEDGATPS(0.951)PS(0.049)NETPKK 203.64 5.665600000000001e-13 1568930000.0 1303440.0 1204390.0 1017630.0 880200.0 997990.0 1297660.0 1146280.0 1267850.0 1506990.0 1255950.0 True False 1231135.5848567786 1146529.2965737528 1083228.0580655695 963853.9433582213 1076526.1352136505 1289560.8225974638 1262157.1690147251 1263452.1242684147 1233358.604126416 1244823.2601143143 0.9890043223836622 0.9210378158168936 0.8701862286587534 0.7742897921667281 0.8648023938071268 1.0359388870023534 1.0139247951543089 1.0149650675328719 0.9907901335432585 1.0 20.247509492455368 -6.258974851161802 24.987838592970324 1.0122341593753204 0.8790819680395896 0.6055984179192967 0.05127320128693235 163.21925498205385 1654885.4893117324 0.019228048069354093 0.01836259670417059 5.5083959313744e-07 6.258974851161802 -0.13315219133573075 AEDGATPSPSNET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 AEDGATPSPSNETPK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPSPSNET(1)PK;AEDGATPSPSNET(1)PK;AEDGATPSPSNET(1)PK;AEDGATPSPSNET(1)PK;AEDGATPSPSNET(1)PK;AEDGATPSPSNET(1)PK;AEDGATPSPSNET(1)PK;AEDGATPSPSNET(1)PK 420.07 2.2744999999999997e-96 22848330000.0 12221010.0 15661140.0 10671470.0 9065100.0 9913260.0 13027580.0 9512420.0 12024550.0 14009710.0 12596650.0 True False 11543086.213320564 14908755.3265496 11359370.031155715 9926644.378478298 10693377.16326622 12946270.040884564 10474028.245872788 11982839.642601056 11465899.820049157 12485053.481045404 0.9245524042684383 1.1941282709908947 0.9098375147852844 0.7950822472285569 0.8564943017265182 1.0369414965293797 0.8389253807982705 0.9597747947810715 0.9183701004930809 1.0 23.5736986654275 -4.85298744476271 14.209315215603036 0.9082514869938577 1.0593022347509176 0.2829805708814278 0.09185024687925611 0.8801761918691275 132.56266136405802 0.023166092556763083 0.04823638570759037 1.4028542597940818e-05 4.85298744476271 0.15105074775705984 AEDGATPSPSNET(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 4 AEDGATPSPSNETPKK 16 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 AEDGATPSPSNET(1)PKK;AEDGATPSPSNET(1)PKK;AEDGATPSPSNET(1)PKK;AEDGATPSPSNET(1)PKK 319.89 3.090199999999999e-47 12245000000.0 4389590.0 5217070.0 3669640.0 3060700.0 3376560.0 4401020.0 3084790.0 4107410.0 4941700.0 4446690.0 True False 4146090.6922692824 4966434.126218279 3906190.866031594 3351588.0077669933 3642276.0620016204 4373551.601704526 3396630.6778491614 4093162.3533867 4044411.8501194464 4407295.786072472 0.9407334777419237 1.1268665338761115 0.8863010461824633 0.7604635972830258 0.8264197001507373 0.9923435625821663 0.7706836215946474 0.928724222758439 0.9176629040647152 1.0 22.071462292529063 -4.845960184968174 8.734017484635563 0.8754276781094399 1.0332444742547109 0.3075267038098862 0.08819646562103074 0.2675793994561114 24.572204924110064 0.022423877142111387 0.04695806943162358 1.4257382957317132e-05 4.845960184968174 0.157816796145271 AEDGSVIDYELIDQDAR ddPTM_KYSE-520_SHP099_60min_R1 1 AEDGSVIDYELIDQDAR 17 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 0 287.04 2.2341999999999995e-34 0.0 70002.0 88444.0 156150.0 56859.0 90378.0 87065.0 53933.0 73867.0 101070.0 92538.0 False True 66118.84951447272 84195.01748284955 166215.6788488337 62262.86226471833 97490.23441952257 86521.59503987804 59385.07397535609 73610.77261768747 82718.23576736197 91718.1853134746 0.7208913836279205 0.9179751779332271 1.8122434311226436 0.6788496965123785 1.0629324390394363 0.9433417674386421 0.6474732766723378 0.8025755455812871 0.9018738812226541 1.0 16.484920190364903 -5.947370480433503 1.5339962039339439 0.8349324057525999 1.093992176793166 0.07926086205126714 0.3036429703361291 0.9126767826477954 4.4150107037552875 0.12223047573396485 0.1421530859037123 1.1288325388613255e-06 5.947370480433503 0.2590597710405661 AEDKDEGIGS(ph)PDIWEDEKAEDLR ddPTM_KYSE-520_SHP099_60min_R1 1 AEDKDEGIGSPDIWEDEKAEDLR 23 2 I3L254;Q01664 I3L254 TFAP4 Transcription factor AP-4 1 AEDKDEGIGS(1)PDIWEDEKAEDLR 60.382 0.016849 262430000.0 302740.0 316290.0 256050.0 314260.0 321480.0 336660.0 306720.0 350150.0 345290.0 311010.0 True False 285946.4087027722 301094.95363903104 272555.39269448485 344127.1759142857 346778.64702901256 334558.78006231406 337726.25089873024 348935.41137562465 282594.04005256126 308254.69336211827 0.927630348735227 0.9767732985830765 0.8841889468794036 1.1163728673873805 1.1249744269802204 1.0853323153438426 1.0956078144834298 1.131971122871817 0.9167550280267348 1.0 18.233763335127232 -5.264074587101822 24.999633766908556 1.0771219352526664 0.9342551058554174 0.4747259806849662 0.06578124177626116 187.93059705399656 1782857.5336474613 0.017877720250855288 0.02796064030993418 5.444091462720863e-06 5.264074587101822 -0.14286682939724904 AEDKEWMPVTK ddPTM_KYSE-520_SHP099_60min_R1 4 AEDKEWMPVTK 11 1 P15880;E9PQD7;E9PPT0;E9PMM9 P15880 RPS2 40S ribosomal protein S2 0 ;;; 132.47 0.00014501 1745130000.0 3121060.0 2650570.0 1875610.0 1735050.0 2909220.0 2814240.0 2097130.0 2309520.0 2310500.0 2346550.0 False True 2947928.5801211405 2523232.638613317 1996514.8216821053 1899948.6303381976 3138159.062802489 2796675.284270678 2309128.3664164543 2301508.8141660197 1890971.4429651676 2325761.392588273 1.2675111855909154 1.08490606416219 0.8584349314786076 0.8169146828186873 1.3493039624800556 1.2024773019206147 0.9928483522751624 0.9895721983778983 0.8130547909993293 1.0 21.14927166295936 -7.2195547221891365 2.5960361650810415 0.9153066949657805 1.08288204819581 0.1634765822512958 0.16268522473053418 0.6143703107159922 8.050498957419027 0.10944017743940854 0.05048990623705737 6.031777012417292e-08 7.2195547221891365 0.16757535323002937 AEDQTES(ph)SCESHR ddPTM_KYSE-520_SHP099_60min_R1 1 AEDQTESSCESHR 13 0 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 AEDQTES(0.981)S(0.018)CESHR 111.65 0.00090081 120900000.0 181220.0 191170.0 202880.0 217370.0 167080.0 186070.0 187880.0 186990.0 221880.0 172400.0 True False 171167.36534688625 181985.90624797973 215957.96941947722 238028.77944532657 180228.2454448407 184908.66811083804 206872.74393209888 186341.37533379428 181592.18513962868 170872.67012517035 1.0017246480756696 1.06503811355361 1.263853191158541 1.3930184345510723 1.0547517359728567 1.0821430248347252 1.2106836264720227 1.0905276730169462 1.0627339351963419 1.0 17.382562141036086 -7.781582841121291 1.5419552226963678 1.0025216989498054 1.157429490014408 0.1699317629809669 0.1095742010038898 0.7032667843081514 3.384545981684935 0.11168822912199676 0.03384824033907855 1.653549342248521e-08 7.781582841121291 0.15490779106460262 AEDQTES(ph)SCESHRK ddPTM_KYSE-520_SHP099_60min_R1 2 AEDQTESSCESHRK 14 1 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 AEDQTES(0.718)S(0.141)CES(0.141)HRK;AEDQTES(0.96)S(0.038)CES(0.002)HRK 85.63600000000001 0.0018812999999999998 13579100.0 23901.0 24899.0 22803.0 22634.9 23696.9 26436.0 20679.8 24317.0 27570.0 26866.0 True False 22575.163884537746 23702.81466583906 24272.917866089992 24786.11409056917 25561.711213082628 26271.003118063698 22770.315999398685 24232.650002630475 22563.982983142054 26627.98814143172 0.8477983302618346 0.8901466584686792 0.9115565823886873 0.9308293949554268 0.9599565343545416 0.9865936164057181 0.855127164638071 0.9100443440909368 0.8473784374281625 1.0 14.700655810425248 -4.425445624865737 1.7370507928677557 0.9238726625090782 0.8360705389835404 0.21603759761876884 0.046800554180445215 1.1072928536752806 4.317391016216081 0.013344133501460827 0.14498376119700385 3.754519593813693e-05 4.425445624865737 -0.08780212352553773 AEDS(ph)DS(ph)EPEPEDNVR ddPTM_KYSE-520_SHP099_60min_R1 2 AEDSDSEPEPEDNVR 15 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 2 AEDS(1)DS(1)EPEPEDNVR;AEDS(1)DS(1)EPEPEDNVR 306.53 2.9541e-47 692130000.0 1195330.0 1101430.0 995940.0 983540.0 966110.0 990090.0 996140.0 1082360.0 1202890.0 1074090.0 True False 1129022.6620687211 1048515.6495198641 1060139.885960343 1077015.345887916 1042137.3605860358 983910.4810547621 1096839.5525895318 1078605.545784722 984475.498389255 1064574.3982293755 1.0605389946879593 0.9849153344883921 0.9958344740617396 1.0116863111485985 0.9789239364757808 0.9242289526135746 1.0303080314666786 1.0131800535300148 0.9247596974214833 1.0 20.02184534598704 -1.7796443703183777 1.3182044319790935 0.9842121319695267 65.30474549314614 0.30679934737826764 0.03373094595920992 1649.1238004202044 4.3838308038278955 0.009695447260516094 320203.40158589836 0.016609464459563583 1.7796443703183777 64.32053336117662 AEEDEILNRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 17 AEEDEILNRSPR 12 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR;AEEDEILNRS(1)PR 278.36 9.9362e-34 133253120000.0 44389800.0 55574760.0 44898630.0 56022050.0 50898050.0 50441310.0 50978680.0 57734500.0 81052870.0 41131690.0 True False 41927409.30512753 52904865.11018461 47792867.530147985 61346368.78835652 54903436.964710124 50126487.07403607 56132102.47837137 57534232.4948336 66335711.984578356 40767295.22657061 1.0284569793534106 1.2977281130905927 1.1723335400234833 1.5047936942447246 1.3467520143187253 1.2295759823027328 1.3768905237987568 1.4112840249783096 1.6271796207206604 1.0 25.280908906231566 -3.4152436911277326 0.8676914831088823 1.3644287944115052 1.8774378549740213e-14 0.23524648139415105 0.16464469765160247 11.744635220252633 2.348495736831162 0.05445230071464669 21.592409275156506 0.00038437604060862765 3.4152436911277326 -1.3644287944114863 AEEDMDEAIEKGEAEQS(ph)EEEADEEDKAEDAR ddPTM_KYSE-520_SHP099_60min_R1 1 AEEDMDEAIEKGEAEQSEEEADEEDKAEDAR 31 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AEEDMDEAIEKGEAEQS(1)EEEADEEDKAEDAR 161.62 3.6188e-10 2725000000.0 1217500.0 901760.0 603780.0 1061200.0 790770.0 724690.0 1131500.0 1051700.0 931220.0 834830.0 True False 1149962.847973922 858438.096030644 642700.6248821567 1162056.1289385867 852999.1001341679 720166.9408998936 1245883.0623758272 1048051.8981686246 762133.9221458662 827434.0556879127 1.3897939540545803 1.0374701042694636 0.7767393914525645 1.4044093555860178 1.03089677572553 0.8703617357170061 1.5057188591784805 1.2666289125570187 0.9210811627909643 1.0 19.658284811948175 -5.276917168761094 24.960061878988075 1.152953995571069 1.06494798122134 0.01914498203894277 0.23703486848049493 3728.17798341448 6012188.671871057 0.06797454608139093 0.10126092535668697 5.28546049623634e-06 5.276917168761094 -0.08800601434972899 AEEDMDEAIEKGEAEQS(ph)EEEADEEDKAEDAREEEYEPEK ddPTM_KYSE-520_SHP099_60min_R1 1 AEEDMDEAIEKGEAEQSEEEADEEDKAEDAREEEYEPEK 39 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AEEDMDEAIEKGEAEQS(1)EEEADEEDKAEDAREEEYEPEK 188.12 1.0414000000000001e-15 909460000.0 213320.0 173940.0 163070.0 208460.0 193050.0 190280.0 179590.0 240380.0 217640.0 180080.0 True False 201486.71435712252 165583.66131073734 173581.75312122502 228271.97572421582 208241.93669575374 189092.39193921784 197744.70982949605 239546.17788511398 178122.06225792642 178484.63130012015 1.1288743063727689 0.9277194350269299 0.9725305302580871 1.278944713959034 1.1667219478723463 1.0594323475462761 1.1079088904690637 1.34211094893834 0.9979686259844744 1.0 17.445440328513783 -5.230976181885687 24.95812101221352 1.14730987804175 1.001509197492384 0.1982673713352937 0.11464576019286483 939.9878529225374 770119.5187569811 0.030107965709987066 0.052139623772830684 5.875215732299098e-06 5.230976181885687 -0.14580068054936612 AEEDTQFNYHR ddPTM_KYSE-520_SHP099_60min_R1 2 AEEDTQFNYHR 11 0 G8JLG1;Q14683;H0Y7K8 G8JLG1 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A 0 ; 180.88 5.3963e-06 384130000.0 297890.0 290960.0 195881.0 199835.0 317770.0 281770.0 216620.0 271270.0 238530.0 246320.0 False True 281365.4478710071 276981.8448601362 208507.80268068117 218827.25831741642 342776.69113602466 280011.36891272565 238518.063607469 270329.0276848939 195218.96485197239 244137.7964340601 1.1524862269615919 1.1345307810007497 0.8540578547287645 0.8963268347370381 1.4040295937077742 1.1469398552892844 0.976981307652177 1.1072805261347884 0.7996261443471316 1.0 17.897336139104443 -7.746387231493805 24.997344796060037 0.8998130504454112 1.0810255270483937 0.18829897105998294 0.15292583418495542 369.4606907145297 613575.5940050539 0.10981100498043585 0.041142019604013126 1.7931340954735856e-08 7.746387231493805 0.18121247660298256 AEEFKK ddPTM_KYSE-520_SHP099_60min_R1 3 AEEFKK 6 1 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ;; 97.071 0.03213 5978500000.0 6732400.0 6330900.0 3557860.0 3339630.0 6126900.0 5914500.0 4088530.0 4942030.0 4972180.0 5431500.0 False True 6358940.351293332 6026754.061125364 3787205.34837727 3657027.431103632 6609052.172707653 5877585.411627619 4501838.512607545 4924887.251408468 4069357.450457715 5383381.135643058 1.181216821003282 1.1195109373220058 0.7034993906157601 0.6793179488798707 1.227676808715901 1.091801836714191 0.8362474064489192 0.9148316136862522 0.7559110804016331 1.0 22.360081139031685 -4.587189015013894 10.298605960775886 0.9064167784498879 1.1658610045442928 0.2740926723040876 0.16339247749013525 0.5111646355941065 78.31604504294683 0.0445801645981908 0.11822527542365813 2.5870867100596773e-05 4.587189015013894 0.2594442260944049 AEEGDADEKLFEES(ph)DDKEDEDADGK ddPTM_KYSE-520_SHP099_60min_R1 2 AEEGDADEKLFEESDDKEDEDADGK 25 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 AEEGDADEKLFEES(1)DDKEDEDADGK;AEEGDADEKLFEES(1)DDKEDEDADGK 301.72 2.6482e-49 3542500000.0 2644200.0 2538200.0 2204400.0 1933540.0 2382700.0 2256400.0 2418100.0 2441800.0 3110700.0 2382500.0 True False 2497520.9549179836 2416261.0620841254 2346499.1511647087 2117303.0602599992 2570204.934291486 2242316.970630919 2662545.146381783 2433329.965720405 2545875.294365612 2361392.9035569523 1.0576473534565054 1.02323550580868 0.9936928105569347 0.8966331088192558 1.0884274829571994 0.9495738584008321 1.1275316116903742 1.0304638258441 1.0781243945176489 1.0 21.171206675631655 -6.753095999578849 24.999953951994264 1.0615686147702192 1.0013463399909788 0.18726430344254552 0.058582695071431774 301.4179047990839 903167.3450653509 0.022028648274264085 0.016768238047009783 1.7656474861150065e-07 6.753095999578849 -0.06022227477924047 AEEGDADEKLFEES(ph)DDKEDEDADGKEVEDADEK ddPTM_KYSE-520_SHP099_60min_R1 3 AEEGDADEKLFEESDDKEDEDADGKEVEDADEK 33 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 AEEGDADEKLFEES(1)DDKEDEDADGKEVEDADEK;AEEGDADEKLFEES(1)DDKEDEDADGKEVEDADEK;AEEGDADEKLFEES(1)DDKEDEDADGKEVEDADEK 210.99 1.7933e-22 3794450000.0 2243300.0 2279220.0 2116040.0 1963260.0 2008460.0 1942730.0 2087600.0 2125210.0 2608130.0 1809300.0 True False 2118859.677092318 2169722.8500210303 2252443.324183709 2149847.6401243554 2166514.375425812 1930604.701450898 2298634.981012617 2117838.142537744 2134559.337606904 1793271.0096141014 1.1815613288413562 1.2099246786395876 1.2560529401902383 1.198841462667144 1.2081355042325865 1.076582787041402 1.2818112648278779 1.1809916801105744 1.190316090631636 1.0 20.774162102528173 -12.864308573478626 0.37020873082273215 1.0009079249730316e-10 1.204626956869664 0.5786623742541004 0.05085097811972178 151.73248293243321 2.690443364324972 118.06793572137413 0.035836649539662674 1.3667573765914e-13 12.864308573478626 1.204626956769573 AEEGKS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 5 AEEGKSPFR 9 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 AEEGKS(1)PFR;AEEGKS(1)PFR;AEEGKS(1)PFR;AEEGKS(1)PFR;AEEGKS(1)PFR 102.97 0.0013298 9441100000.0 7534100.0 6548080.0 6301910.0 6458920.0 7165100.0 6403540.0 6622070.0 6742110.0 7734100.0 6823060.0 True False 7116168.454144002 6233500.407931534 6708141.202012516 7072773.814854891 7728952.606157697 6363573.131587442 7291493.460775147 6718723.194030312 6329782.400795036 6762612.996660352 1.0522808946273061 0.9217591500518934 0.9919451557149971 1.0458640496428981 1.1428944122596638 0.9409932425129205 1.0782065252552493 0.9935099343032472 0.9359965451107338 1.0 22.68914936449055 -10.141523914025276 13.508521768592093 0.9999918771120873 1.0125153583981592 0.0024831729014371806 0.06633176525514682 0.0 0.0 0.06447069982571021 0.015636441478758433 7.218984111722187e-11 10.141523914025276 0.012523481286071947 AEEILEK ddPTM_KYSE-520_SHP099_60min_R1 2 AEEILEK 7 0 Q5VVC8;P62913-2;P62913 Q5VVC8 RPL11 60S ribosomal protein L11 0 ; 109.86 0.022777000000000002 483890000.0 649660.0 637190.0 579910.0 524600.0 646970.0 698790.0 507220.0 582020.0 714440.0 635740.0 False True 613622.064734898 606578.4359583104 617291.9264888064 574457.8262732584 697882.8582442467 694428.5924070103 558494.7475901607 580001.1084644889 584715.7055667755 630107.8381982356 0.9738365840512667 0.9626581343485482 0.979660764503302 0.91168176532432 1.1075609854970392 1.102078962218113 0.8863478816374524 0.9204791200867702 0.9279613268083495 1.0 19.265239230541564 -6.796056031746409 24.999998013129623 0.927070356085909 1.003363534065086 0.24078267155985011 0.06254544415286993 286.21935121306393 206703.93077203885 0.028186817519265314 0.019004521716373 1.5993516703666835e-07 6.796056031746409 0.0762931779791769 AEEKENDTVTIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 AEEKENDTVTISPK 14 1 Q9UGU0;Q9UGU0-2 Q9UGU0 TCF20 Transcription factor 20 1 AEEKENDTVTIS(0.999)PK;AEEKENDTVTIS(1)PK;AEEKENDTVTIS(1)PK;AEEKENDTVTIS(1)PK;AEEKENDT(0.001)VT(0.012)IS(0.988)PK;AEEKENDTVT(0.007)IS(0.993)PK 204.81 1.9216e-10 5617930000.0 6359240.0 5704590.0 5440860.0 5020540.0 6036310.0 5261870.0 5259150.0 5979410.0 7443240.0 5420060.0 True False 6006480.280369352 5430532.933635847 5791586.541283796 5497690.612119606 6511333.255094241 5229028.717538426 5790796.206357773 5958668.822314791 6091735.244811102 5372042.485142868 1.118099921395095 1.0108879348320015 1.0780976802214866 1.0233892653165413 1.2120777661573303 0.9733781391342368 1.0779505602148582 1.1091998692851592 1.1339700424296055 1.0 22.357039283780995 AEEKS(ph)PISINVK ddPTM_KYSE-520_SHP099_60min_R1 1 AEEKSPISINVK 12 1 Q9UK58;Q9UK58-6 Q9UK58 CCNL1 Cyclin-L1 1 AEEKS(0.999)PIS(0.001)INVK 99.927 0.0022853 13640000000.0 328090.0 323850.0 255180.0 237730.0 218410.0 314010.0 250330.0 368530.0 367160.0 320980.0 True False 309890.1936688002 308291.75989124004 271629.311102436 260323.78772386917 235597.6244170918 312050.1471139044 275635.7993853646 367251.6554455488 300492.99935039657 318136.36691866093 0.9740797528753791 0.9690553861453447 0.8538140852406365 0.8182773640287 0.7405554627375496 0.9808691478320911 0.866407704516967 1.154384388690292 0.9445414941424307 1.0 18.279285773614813 -7.234007317822682 24.671992328717234 1.0370972295258536 0.8835287604198246 0.3772600623598046 0.08635027264935463 622.1795574377372 559579.9110973804 0.04194496859897467 0.02420850989709388 5.8343527335941096e-08 7.234007317822682 -0.15356846910602895 AEELS(ph)PAALS(ph)PLLEPIR ddPTM_KYSE-520_SHP099_60min_R1 6 AEELSPAALSPLLEPIR 17 0 A0A5F9ZH52;A5YM69 A0A5F9ZH52 ARHGEF35 Rho guanine nucleotide exchange factor 35 2 AEELS(1)PAALS(1)PLLEPIR;AEELS(1)PAALS(1)PLLEPIR;AEELS(1)PAALS(1)PLLEPIR;AEELS(1)PAALS(1)PLLEPIR;AEELS(1)PAALS(1)PLLEPIR;AEELS(1)PAALS(1)PLLEPIR 197.38 1.6796e-12 1295172000.0 1407089.0 1423536.0 1364114.0 1288591.0 1445036.0 1519114.0 1445509.0 1641900.0 2138280.0 1680373.0 True False 1329034.9682076185 1355147.1937889005 1452046.9710995704 1411058.3012109885 1558752.112069851 1509632.6460392745 1591635.1565283407 1636204.6321223408 1750022.253652267 1665486.2025304108 0.7979861773627338 0.8136646174132183 0.8718456922029391 0.8472350590879323 0.9359141550987355 0.9064215865286999 0.9556579658901607 0.9824186052315643 1.0507575811756462 1.0 20.667511971596177 -6.031216038014104 0.477247090725319 1.0274703777954857 0.7830171399223372 0.8913913060649653 0.02610920784009035 0.36740590839157233 0.17120627970039315 0.023332040126859493 0.04021445232760274 9.306448148460233e-07 6.031216038014104 -0.24445323787314843 AEELS(ph)PAALSPLLEPIR ddPTM_KYSE-520_SHP099_60min_R1 11 AEELSPAALSPLLEPIR 17 0 A0A5F9ZH52;A5YM69 A0A5F9ZH52 ARHGEF35 Rho guanine nucleotide exchange factor 35 1 AEELS(1)PAALSPLLEPIR;AEELS(1)PAALSPLLEPIR;AEELS(1)PAALSPLLEPIR;AEELS(1)PAALSPLLEPIR;AEELS(1)PAALSPLLEPIR;AEELS(1)PAALSPLLEPIR;AEELS(1)PAALSPLLEPIR;AEELS(1)PAALSPLLEPIR;AEELS(1)PAALSPLLEPIR;AEELS(1)PAALSPLLEPIR;AEELS(1)PAALSPLLEPIR 308.29 3.5417000000000003e-47 1161409000.0 1025995.0 1310803.0 980299.0 801106.0 907916.0 1154969.0 840934.0 1075634.0 1283120.0 1176087.0 True False 969081.0120796743 1247830.056324585 1043490.6420738569 877242.8733786981 979363.8238646027 1147760.410057002 925943.8154449426 1071902.8767088628 1050137.7528229684 1165667.784161841 0.8313526591767997 1.0704851530419723 0.8951869960309197 0.752566799304202 0.8401740505926413 0.9846376691985915 0.7943462348586146 0.9195612088392761 0.9008894018445032 1.0 20.15272524771326 -9.262841357281003 12.071255009317458 0.9999999816072469 0.8889576067720231 0.12911209117706246 0.08745090467367338 0.0 0.0 0.08617404783982867 0.020900276554743708 5.459572565014317e-10 9.262841357281003 -0.11104237483522383 AEELSPAALS(ph)PLLEPIR ddPTM_KYSE-520_SHP099_60min_R1 2 AEELSPAALSPLLEPIR 17 0 A0A5F9ZH52;A5YM69 A0A5F9ZH52 ARHGEF35 Rho guanine nucleotide exchange factor 35 1 AEELSPAALS(1)PLLEPIR;AEELS(0.002)PAALS(0.998)PLLEPIR 123.36 8.342e-05 128373000.0 54654.1 77772.2 78733.4 61613.5 64500.1 89631.2 72199.5 124470.6 131283.3 127018.1 True False 51622.32812275278 74035.9067735479 83808.68094189411 67469.22851522577 69575.89091463231 89071.77843379462 79498.13005921646 124038.84054025647 107445.56210267442 125892.81845258636 0.4100498245830816 0.5880868160992936 0.6657145496624024 0.5359259514921096 0.552659728885456 0.707520726985239 0.6314747023409994 0.9852733624116284 0.8534685570101878 1.0 16.941836461398832 -7.117894441143588 1.083780602774329 0.9818316698128206 0.5567381196733658 0.787099383019639 0.08577773580090109 0.2324215956784212 0.4937976502283265 0.06976780961410767 0.02991733029083378 7.622642621279606e-08 7.117894441143588 -0.4250935501394547 AEELSPAALS(ph)PSLEPIR ddPTM_KYSE-520_SHP099_60min_R1 7 AEELSPAALSPSLEPIR 17 0 A0A2R8YFR7;A0A2R8YF49;A0A5F9ZGZ6;Q12774 A0A2R8YFR7;Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 AEELS(0.356)PAALS(0.403)PS(0.241)LEPIR;AEELSPAALS(0.984)PS(0.016)LEPIR;AEELSPAALS(0.981)PS(0.019)LEPIR;AEELSPAALS(0.996)PS(0.004)LEPIR;AEELSPAALS(0.835)PS(0.165)LEPIR;AEELSPAALS(0.832)PS(0.168)LEPIR;AEELSPAALS(0.989)PS(0.011)LEPIR 361.93 6.827899999999999e-72 3374566000.0 1538880.0 1945300.0 1345434.0 1164963.0 1320074.0 1840800.0 1413010.0 2052160.0 2255330.0 2282700.0 True False 1453515.2587187751 1851844.8680451722 1432162.8284105135 1275680.733261103 1423956.3136063733 1829310.8843899108 1555850.8404486643 2045041.5359377435 1845818.9242426485 2262477.053913726 0.6424441990270905 0.8185032704936276 0.6330065650535988 0.5638425066253724 0.6293793394028704 0.8085433977000975 0.6876758541074657 0.9038949289674105 0.8158398429056661 1.0 21.109471729753057 -7.521906564332462 0.7656294036748428 0.9841534946239368 0.6647013741607857 0.6272642292860272 0.08122028987661678 0.4203660837708331 0.49809200430581474 0.07916433446058722 0.03344712452351221 3.006723110207135e-08 7.521906564332462 -0.3194521204631511 AEEPPS(ph)PPVPK ddPTM_KYSE-520_SHP099_60min_R1 2 AEEPPSPPVPK 11 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 AEEPPS(1)PPVPK;AEEPPS(1)PPVPK 156.14 3.2776e-05 679840000.0 1557390.0 1734680.0 1372520.0 1207870.0 1247070.0 1747690.0 1353930.0 1796550.0 2036030.0 1742290.0 True False 1470998.472120004 1651343.3689922357 1460994.8353096447 1322665.6016406426 1345207.3141423115 1736782.01843731 1490798.4574834295 1790318.1873679224 1666338.276139524 1726854.6660811075 0.8518368690853766 0.9562723496238189 0.846043887772675 0.7659391537808308 0.7789927783529695 1.00574880593671 0.8633027936662558 1.036750933667648 0.9649557133381015 1.0 20.719715238556418 -6.2690432473264845 24.952115090201737 0.9695205317797037 0.8425283608339236 0.5230687694909386 0.0640342445389204 541.8065565603747 1777935.061010931 0.023900313670019675 0.02147971094448971 5.382161839305954e-07 6.2690432473264845 -0.12699217094578008 AEFEVHEVYAVDVLVSSGEGK ddPTM_KYSE-520_SHP099_60min_R1 17 AEFEVHEVYAVDVLVSSGEGK 21 0 Q9UQ80;Q9UQ80-2;F8VR77 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ;;;;;;;;;;;;;;;; 159.04 1.0291e-08 736189700.0 1590883.0 1407432.0 1385222.0 1692154.0 1243777.0 1087625.8 1258134.9 1482457.0 1551883.0 1110319.5 False True 1502633.5486433636 1339816.8541214988 1474515.6265535653 1852975.807395348 1341655.1737769176 1080837.5239478936 1385319.45390535 1477314.7026750667 1270100.1669868508 1100482.9330454995 1.3654310335235678 1.2174808112777011 1.3398805036194064 1.6837842294086143 1.2191512775795559 0.9821483745838395 1.2588286581342867 1.3424240016032916 1.1541298177809527 1.0 20.069705340540423 -5.978962872047311 24.998523586363106 1.1675079683826681 1.3925016997708695 0.3929274059405802 0.1484960589347444 288.09063555474665 342337.89780335984 0.048168452786958374 0.05461284365906044 1.0496321581537842e-06 5.978962872047311 0.22499373138820133 AEFIPQLES(ph)EDDTSYFDTR ddPTM_KYSE-520_SHP099_60min_R1 2 AEFIPQLESEDDTSYFDTR 19 0 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6;V9GXZ1;O15021;O15021-2;O15021-3;O15021-6 Q6P0Q8;O15021 MAST2;MAST4 Microtubule-associated serine/threonine-protein kinase 2;Microtubule-associated serine/threonine-protein kinase 4 1 AEFIPQLES(1)EDDTSYFDTR;AEFIPQLES(1)EDDTSYFDTR 151.87 1.1169e-06 91508000.0 99923.0 75676.0 78142.0 67593.0 82929.0 77072.0 72769.0 80556.0 79278.0 76989.0 True False 94380.07199843795 72040.41136800825 83179.15835162057 74017.01839742354 89455.04049853471 76590.96505959329 80125.20067700089 80276.57003791172 64883.11363574662 76306.93735653555 1.2368478577178077 0.9440873118967882 1.0900602387300036 0.9699906844850472 1.1723054757205906 1.0037221740630298 1.050038220019563 1.0520219107055564 0.8502911515448143 1.0 16.219526603514915 -7.688107995117011 9.048274809978674 0.9256794696417069 1.059877928097604 0.27752202687342564 0.08992098187252928 0.33580984414054954 37.61697478764147 0.05612644081742356 0.02103371392784897 2.050652183950844e-08 7.688107995117011 0.13419845845589717 AEFMCHMKPS(ph)ERK ddPTM_KYSE-520_SHP099_60min_R1 1 AEFMCHMKPSERK 13 2 Q9HCE0-2;Q9HCE0 Q9HCE0-2 EPG5 Ectopic P granules protein 5 homolog 1 AEFMCHMKPS(1)ERK 50.305 0.057685 640780000.0 285730.0 190030.0 317580.0 98676.0 299220.0 316620.0 181920.0 147670.0 233010.0 262780.0 True False 269879.9873113664 180900.67355915467 338051.714945966 108054.13737197887 322766.9116710868 314643.8571357741 200310.2489681047 147157.76723643698 190701.25770409606 260451.97363974617 1.0361986647283425 0.694564418273037 1.2979426119210555 0.41487163971902924 1.2392569238793094 1.2080686229353956 0.7690870841515344 0.5650092229286914 0.732193559676655 1.0 17.990657843948103 -6.974243757089091 24.7260773638815 0.7225703753886641 0.9706875907379104 0.1260748051788957 0.26961592825647746 358.38222122707964 344047.2732353259 0.10988794376262725 0.07408373073276762 1.0610998250042345e-07 6.974243757089091 0.24811721534924636 AEFTS(ph)PPSLFK ddPTM_KYSE-520_SHP099_60min_R1 8 AEFTSPPSLFK 11 0 Q6UN15;Q6UN15-3;Q6UN15-5;A0A0B4J203;Q6UN15-4 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 AEFT(0.039)S(0.9)PPS(0.061)LFK;AEFT(0.012)S(0.975)PPS(0.013)LFK;AEFT(0.053)S(0.794)PPS(0.152)LFK;AEFT(0.096)S(0.897)PPS(0.007)LFK;AEFTS(0.989)PPS(0.011)LFK;AEFT(0.009)S(0.981)PPS(0.009)LFK;AEFT(0.001)S(0.999)PPSLFK;AEFT(0.001)S(0.991)PPS(0.008)LFK 150.14 5.6426000000000005e-05 7694230000.0 9619590.0 9432220.0 7764890.0 6502740.0 7161400.0 8947930.0 7082080.0 8025600.0 10294610.0 8973590.0 True False 9085972.16652275 8979081.993149132 8265427.233663267 7120758.454479933 7724961.437207812 8892082.649803888 7798005.760840115 7997761.066789118 8425368.329999425 8894090.973947385 1.0215740083092724 1.0095558972188055 0.9293166955312687 0.800616777514205 0.8685498562850107 0.999774195682349 0.8767625363493663 0.8992218642935178 0.9472995446841116 1.0 23.084415730814978 -4.794522060274865 4.303589027194833 0.906370023947594 1.018028196726979 0.3270703607837301 0.05730726106129356 0.20865655728513174 8.515802653444727 0.015386113900581483 0.03731891651322261 1.6050107284468914e-05 4.794522060274865 0.11165817277938506 AEGAATEEEGT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 AEGAATEEEGTPK 13 0 P80723;P80723-2;U3KQP0 P80723 BASP1 Brain acid soluble protein 1 1 AEGAATEEEGT(1)PK 121.76 0.00043194 89592000.0 92300.0 117780.0 83108.0 75962.0 82331.0 115970.0 70835.0 113850.0 118740.0 95415.0 True False 87179.93500451169 112121.67200861585 88465.2746575016 83181.405641192 88809.98130068925 115246.18821311282 77995.69308297984 113455.0809227898 97179.80919181314 94569.69733174672 0.9218590887384144 1.1855982959879579 0.9354505423356592 0.8795777927616174 0.9390955433551551 1.218637591794693 0.8247429703552298 1.19969804412923 1.0275998753692765 1.0 16.529090358964034 AEGAGRPPPAT(ph)PPRPPPSTSAVR ddPTM_KYSE-520_SHP099_60min_R1 4 AEGAGRPPPATPPRPPPSTSAVR 23 2 Q9BQ89;V9GZ26 Q9BQ89 FAM110A Protein FAM110A 1 AEGAGRPPPAT(0.876)PPRPPPS(0.041)T(0.041)S(0.041)AVR;AEGAGRPPPAT(0.988)PPRPPPS(0.003)T(0.003)S(0.006)AVR;AEGAGRPPPAT(1)PPRPPPSTSAVR;AEGAGRPPPAT(0.969)PPRPPPS(0.01)T(0.01)S(0.01)AVR 103.86 0.0015546 3163820000.0 801110.0 820638.0 756716.0 641782.0 641290.0 771408.0 615515.0 838822.0 1029197.0 827175.0 True False 756670.8313268075 781213.3186772489 805495.124148409 702776.7683212055 691755.8745590254 766593.3565327306 677737.2630475088 835912.3222645276 842320.7687450432 819846.8730324128 0.9229416568097252 0.952877109584784 0.9824945982523294 0.8572049140369424 0.8437622894143509 0.9350445574028836 0.826663228635275 1.0195956705582014 1.0274123088736131 1.0 19.644994949842854 -7.2914125704023585 24.0567195361126 1.0176280654665293 0.9051672526223595 0.5462410766719036 0.04701970154166517 371.3788142849288 298068.93004391034 0.027236353889656978 0.01308750292046595 5.1119597963191285e-08 7.2914125704023585 -0.11246081284416976 AEGEPQEES(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 3 AEGEPQEESPLK 12 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEPQEES(1)PLK;AEGEPQEES(1)PLK;AEGEPQEES(1)PLK 171.26 1.8044999999999998e-06 1288170000.0 3528350.0 3382890.0 2924490.0 2637580.0 2853650.0 3607410.0 2958000.0 3524840.0 3644510.0 3166480.0 True False 3332625.3919086535 3220370.8865785883 3113007.3047494427 2888254.8101826576 3078216.019952536 3584894.816089205 3257023.507298005 3512613.1527438387 2982758.854620639 3138427.450684166 1.0618774670678315 1.0261097116890687 0.9919003557245901 0.9202872634678964 0.9808147769296041 1.1422583036952825 1.037788369646074 1.1192271314024167 0.950399173309043 1.0 21.581610428636143 AEGEPQEES(ph)PLKSK ddPTM_KYSE-520_SHP099_60min_R1 3 AEGEPQEESPLKSK 14 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEPQEES(1)PLKSK;AEGEPQEES(0.998)PLKS(0.002)K;AEGEPQEES(1)PLKSK 202.34 4.5359e-11 427880000.0 1415340.0 1360320.0 1223220.0 1002690.0 1132900.0 1219740.0 997600.0 1099820.0 1644230.0 1071550.0 True False 1336828.2687896579 1294968.1853180507 1302070.7184212005 1097985.3561302589 1222052.784680753 1212127.1502204202 1098447.1436377591 1096004.9811199168 1345679.2796652773 1062056.900653286 1.2587162401255114 1.2193020774324783 1.2259896034009843 1.0338291248377303 1.1506471865387358 1.14130151546007 1.0342639297029086 1.0319644648471744 1.2670500788023047 1.0 20.018429631220712 -5.206148810468974 9.339648460912551 1.0973436731915571 1.2334906996946036 0.42400965488369036 0.07498582624897478 0.49128034125315584 80.12459055126965 0.019801288483858263 0.03431913811767469 6.2208709127080445e-06 5.206148810468974 0.13614702650304644 AEGEPQEESPLKS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 AEGEPQEESPLKSK 14 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEPQEES(0.218)PLKS(0.782)K 188.12 1.6469e-10 640310000.0 495680.0 454240.0 510270.0 371000.0 367380.0 444660.0 363190.0 397560.0 612450.0 402530.0 True False 468183.64228641806 432417.62857185974 543162.8206608666 406259.7284547829 396290.71589373663 441884.7120017474 399904.7895928205 396180.95715120184 501244.51860810176 398963.8973636008 1.1734987686360328 1.0838515249859073 1.3614335137844522 1.018286945609349 0.9932996908052862 1.107580698207964 1.002358339276905 0.9930245813448562 1.2563656058114105 1.0 18.605898675894355 -5.3224004790649815 24.999997509435286 1.050375390313453 1.1940223718990088 0.33099576252241036 0.09935268826335113 273.3773755704577 112110.67281112648 0.027220434158365118 0.04037444268413052 4.759918546061121e-06 5.3224004790649815 0.1436469815855559 AEGEWEDQEALDY(ph)FSDKESGK ddPTM_KYSE-520_SHP099_60min_R1 1 AEGEWEDQEALDYFSDKESGK 21 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEWEDQEALDY(0.536)FS(0.43)DKES(0.034)GK 78.418 0.0049784 5820600000.0 1325100.0 1272900.0 1110300.0 1209100.0 1292500.0 1191500.0 1187900.0 1298600.0 1527600.0 1245100.0 True False 1251594.0614786397 1211747.9733381472 1181871.7145428117 1324012.500470828 1394212.3966809695 1184063.4065355172 1307984.524786781 1294095.459695517 1250226.3476622358 1234069.382673142 1.0142007240853324 0.9819123546468319 0.9577028092073203 1.0728833557176976 1.1297682417668757 0.9594787968652898 1.0598954508972016 1.0486407635301278 1.0130924283641944 1.0 20.234992078256013 -5.259951872444043 24.988228947251766 1.0437108485781723 0.984336001709706 0.24438766158872038 0.04482568970718697 185.17293043098306 3110649.0845076814 0.012503100292331423 0.020271426205652456 5.496017761388442e-06 5.259951872444043 -0.05937484686846628 AEGEWEDQEALDYFS(ph)DK ddPTM_KYSE-520_SHP099_60min_R1 6 AEGEWEDQEALDYFSDK 17 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEWEDQEALDYFS(1)DK;AEGEWEDQEALDYFS(1)DK;AEGEWEDQEALDYFS(1)DK;AEGEWEDQEALDYFS(1)DK;AEGEWEDQEALDYFS(1)DK;AEGEWEDQEALDYFS(1)DK 242.45 2.4304000000000005e-23 454658000.0 1498296.0 1305770.0 1108469.0 1348291.0 1381887.0 1326377.0 1414812.0 1498336.0 1412766.0 1438015.0 True False 1415182.5341009726 1243038.8491992722 1179922.6853531084 1476432.1712615304 1490633.6450385114 1318098.5891484325 1557835.0041944925 1493138.6221302522 1156243.3073326692 1425275.3058587415 0.9929187212349211 0.8721394695394163 0.8278559801765415 1.0358926203186873 1.0458566418088544 0.924802796856335 1.0930063811467514 1.047614180918277 0.811242082550516 1.0 20.442809186169857 -5.272034559130289 24.918849124450045 0.9994385052367752 0.8950881959722241 0.2157402293673092 0.0837649807243778 950.5631132315533 2235631.8922940427 0.02349797068607841 0.035259624448503 5.34521822949715e-06 5.272034559130289 -0.10435030926455113 AEGEWEDQEALDYFS(ph)DKES(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 2 AEGEWEDQEALDYFSDKESGK 21 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 2 AEGEWEDQEALDY(0.032)FS(0.968)DKES(1)GK;AEGEWEDQEALDYFS(1)DKES(1)GK 176.26 1.1422e-09 923200000.0 1325120.0 1186320.0 948960.0 1145990.0 1121500.0 1116100.0 1228490.0 1313840.0 1313130.0 1095300.0 True False 1251612.952038769 1129327.4064973765 1010131.4799896834 1254904.5450455418 1209755.6695378784 1109134.0059037267 1352677.7581070056 1309282.59569256 1074698.693313504 1085596.494130505 1.152926486780185 1.0402828422929804 0.9304852083174197 1.1559585461360964 1.1143695434525303 1.0216816394493553 1.2460225925751685 1.2060490272135722 0.9899614627756058 1.0 20.05005653610303 -5.323066659468501 24.999978582494652 1.116260463570852 1.04113386453127 0.07810042717952248 0.09467539108614367 502.0563967609997 203665.07167803508 0.02687110110200897 0.03985629659399485 4.752622727664027e-06 5.323066659468501 -0.07512659903958196 AEGEWEDQEALDYFS(ph)DKES(ph)GKQK ddPTM_KYSE-520_SHP099_60min_R1 6 AEGEWEDQEALDYFSDKESGKQK 23 2 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 2 AEGEWEDQEALDY(0.002)FS(0.998)DKES(1)GKQK;AEGEWEDQEALDY(0.02)FS(0.98)DKES(1)GKQK;AEGEWEDQEALDY(0.003)FS(0.997)DKES(1)GKQK;AEGEWEDQEALDY(0.383)FS(0.779)DKES(0.838)GKQK;AEGEWEDQEALDY(0.001)FS(0.999)DKES(1)GKQK;AEGEWEDQEALDY(0.001)FS(0.999)DKES(1)GKQK 167.06 1.1443e-10 11354280000.0 4475580.0 4107560.0 3665020.0 3810100.0 3702930.0 3501220.0 3702350.0 4015050.0 4967800.0 3444910.0 True False 4227310.655552459 3910226.652026738 3901273.0534393317 4172210.7584516597 3994329.5242103445 3479367.5872683865 4076619.6694539487 4001122.7286697123 4065772.748046905 3414390.7774994266 1.238086361821884 1.1452194276632985 1.1425971154644694 1.221948813224956 1.1698513100880747 1.0190302791927486 1.1939522846413948 1.1718408903388575 1.1907754598097076 1.0 21.703196753787466 -11.398951134268176 1.9742395020474377 1.6969831431497902e-05 1.1630690145863904 0.43243425386149115 0.056941793675581706 686941.195859244 69513.19675976217 3067632.0969512546 0.014932547362742628 3.990698021748111e-12 11.398951134268176 1.163052044754959 AEGEWEDQEALDYFS(ph)DKESGK ddPTM_KYSE-520_SHP099_60min_R1 15 AEGEWEDQEALDYFSDKESGK 21 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 AEGEWEDQEALDY(0.012)FS(0.986)DKES(0.002)GK;AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDY(0.001)FS(0.997)DKES(0.002)GK;AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDYFS(0.995)DKES(0.005)GK;AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDYFS(1)DKESGK;AEGEWEDQEALDYFS(1)DKESGK 260.14 1.2765e-35 98206952000.0 10119234.0 9365384.0 8254358.0 9202101.0 9621372.0 8862759.0 9305903.0 9639998.0 10955100.0 9153799.0 True False 9557899.917827146 8915456.894912012 8786447.12411976 10076665.912327461 10378519.238281766 8807443.233607475 10246634.492101083 9606559.09693044 8965929.99559736 9072703.462407866 1.0534787075792411 0.9826681685180834 0.9684486173857451 1.1106574742665674 1.1439279682494263 0.9707628239036491 1.1293915352306312 1.0588419578281787 0.9882313505282174 1.0 23.113101074946165 -9.64262999543889 5.711825545153591 0.9999999991774325 1.046586010467408 0.04346716755926994 0.06323009278880326 6.799842072971933e-10 1.6399150855838503e-10 0.0628602589332697 0.01524585184955495 2.2770365645964402e-10 9.64262999543889 0.046586011289975526 AEGPLDS(ph)PSEGHSYQNSGLDHFQNSNIDQSFWETFGSAEPTK ddPTM_KYSE-520_SHP099_60min_R1 1 AEGPLDSPSEGHSYQNSGLDHFQNSNIDQSFWETFGSAEPTK 42 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;F8W1U7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 AEGPLDS(0.718)PS(0.031)EGHS(0.111)YQNS(0.14)GLDHFQNSNIDQSFWETFGSAEPTK 132.78 5.4441999999999995e-06 93509000.0 12186.0 22621.0 20404.0 45582.0 12357.0 18411.0 23578.0 20737.0 30481.0 31755.0 True False 11510.018287811256 21534.253205186753 21719.274487554285 49914.099575272 13329.425598287618 18296.09011978632 25961.49433910491 20665.06818705219 24946.418763480342 31473.675405016165 0.3657030245020837 0.6841988718532281 0.6900774761149358 1.5858999285262014 0.42351029635907156 0.581314062763396 0.8248637632885817 0.6565826177313459 0.792612189153621 1.0 14.941858041788372 -13.999999999999138 0.029834672869316747 2.041537126921656 1.352565295733066e-10 0.06371633909126317 0.3160620832956613 6357.326046856258 14.24777227283655 759.0066226640902 308.62218457792125 1.0000000000019838e-14 13.999999999999138 -2.041537126786399 AEGPLDSPSEGHS(ph)YQNSGLDHFQNSNIDQSFWETFGSAEPTK ddPTM_KYSE-520_SHP099_60min_R1 1 AEGPLDSPSEGHSYQNSGLDHFQNSNIDQSFWETFGSAEPTK 42 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;F8W1U7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 AEGPLDS(0.057)PS(0.056)EGHS(0.281)Y(0.26)QNS(0.281)GLDHFQNS(0.063)NIDQS(0.001)FWETFGSAEPTK 71.528 0.015314 52457000.0 11118.0 13756.0 8747.8 16781.0 9211.8 10100.0 8677.8 12273.0 12149.0 13893.0 True False 10501.262376816476 13095.141111823044 9311.697184974873 18375.86119460838 9936.716252027678 10036.962153595225 9555.036711166544 12230.42782753974 9943.047851367162 13769.918828590442 0.7626234045049515 0.9509962458626583 0.6762347186565126 1.334493065889004 0.7216248966839298 0.7289049614987932 0.6939065386011898 0.8881989777707141 0.722084710530206 1.0 13.749232434597113 AEGS(ph)DVANAVLDGADCIMLSGETAK ddPTM_KYSE-520_SHP099_60min_R1 2 AEGSDVANAVLDGADCIMLSGETAK 25 0 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 AEGS(1)DVANAVLDGADCIMLSGETAK;AEGS(1)DVANAVLDGADCIMLSGETAK 196.28 1.5232000000000002e-15 53840000.0 54124.0 59101.0 47171.0 37301.0 42961.0 52885.0 43249.0 54451.0 65429.0 51985.0 True False 51121.63382648095 56261.699247590426 50211.71813626856 40846.07582504542 46341.78628534714 52554.925098305306 47621.03098956439 54262.122189958915 53548.742930866916 51524.45334371798 0.9921819739736037 1.0919417013950723 0.9745220934477032 0.7927512700146968 0.8994134489152669 1.0199996639986277 0.9242413630647571 1.053133389460302 1.0392879391392076 1.0 15.652969672909501 -7.267599880909313 24.6885762361339 1.0346580028596013 0.9562993351151954 0.16960140730618212 0.07526742948268217 848.3451978488342 3399767.188175866 0.044334336368602685 0.022173247862917096 5.400079071456183e-08 7.267599880909313 -0.07835866774440592 AEIAFEDRK ddPTM_KYSE-520_SHP099_60min_R1 4 AEIAFEDRK 9 1 Q14315;Q14315-2 Q14315 FLNC Filamin-C 0 ;;; 170.99 0.00019505 2062890000.0 2020160.0 1957340.0 1320270.0 1138540.0 1854970.0 1835500.0 1397130.0 1510830.0 1594750.0 1526810.0 False True 1908097.697710881 1863306.448372762 1405376.7167066897 1246746.4992854672 2000945.5856644514 1824043.963655845 1538365.535074801 1505589.2833603742 1305183.6003759806 1513283.6512402059 1.2608989042781944 1.231300190711567 0.9286935172761026 0.8238683463365912 1.3222541484701722 1.2053549657798501 1.0165744761823332 0.9949154490147794 0.8624844385957136 1.0 20.529251002273867 -7.076064955152598 2.983723803973759 0.9455384363427666 1.1186771519146008 0.222220673876677 0.14787015755273325 0.4806054487632359 8.293696067780537 0.08556382613639414 0.04644440740829661 8.393344422716085e-08 7.076064955152598 0.17313871557183425 AEIEKS(ph)PGGGR ddPTM_KYSE-520_SHP099_60min_R1 2 AEIEKSPGGGR 11 1 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 AEIEKS(1)PGGGR;AEIEKS(1)PGGGR 132.21 0.00020989 1045580000.0 2036300.0 1902670.0 1881520.0 1634040.0 1832280.0 1674150.0 1520270.0 1708510.0 2404700.0 1676250.0 True False 1923342.3797365872 1811262.8772341076 2002805.7897384411 1789338.6703079592 1976470.0117528883 1663701.0088555878 1673953.7280053878 1702583.5775792298 1968067.0975539254 1661399.7291027678 1.1576638337212686 1.090202944845954 1.205493027749588 1.0770067184700243 1.1896414674512275 1.0013851451354592 1.007556278409531 1.0247886452339217 1.184583735677369 1.0 20.66396779362619 -6.264061785860688 24.99977247493375 1.042955395707756 1.1407070373394377 0.3935231560795489 0.0622114955938599 256.45855839721656 2444847.0981083647 0.020965246071999597 0.019338837665691104 5.444251934837339e-07 6.264061785860688 0.09775164163168171 AEIHAQPS(ph)DKER ddPTM_KYSE-520_SHP099_60min_R1 1 AEIHAQPSDKER 12 1 P23229-7;P23229-4;P23229-2;P23229-9;P23229-6 P23229-7 1 AEIHAQPS(1)DKER 109.38 0.00013059 671140000.0 452250.0 373730.0 357810.0 380970.0 512850.0 529210.0 365000.0 415360.0 541450.0 479980.0 True False 427162.7909619765 355775.4498198331 380875.0051162418 417177.2742571927 553208.3772826579 525907.0040895179 401897.7620567178 413919.2131057527 443136.3288437528 475727.75061878964 0.8979143857098023 0.7478551531985849 0.8006154877886128 0.8769244041672174 1.1628675782799878 1.1054789286634192 0.8448062185440317 0.8700758208184383 0.9314914428837829 1.0 18.859776658897125 -5.531716476662728 24.979065122891758 0.9820142348245872 0.8137124835218902 0.39161908669557466 0.09684132927982914 220.8680798032382 624260.6955515496 0.03192314392386068 0.0412736729909776 2.9395680833444283e-06 5.531716476662728 -0.16830175130269698 AEIS(ph)FEDRK ddPTM_KYSE-520_SHP099_60min_R1 1 AEISFEDRK 9 1 Q60FE5;P21333-2;P21333;H0Y5C6 Q60FE5 FLNA Filamin-A 1 AEIS(1)FEDRK 90.61399999999999 0.0026431 324350000.0 189140.0 189490.0 213470.0 170020.0 173850.0 168950.0 185960.0 180860.0 219790.0 197530.0 True False 178648.0271587579 180386.6159697114 227230.61776407642 186178.64968162286 187531.00592880973 167895.52038117946 204758.65159470495 180232.63887304137 179881.67645501616 195780.03787601454 0.9124935774703131 0.9213738945333556 1.1606424241677755 0.950958288196511 0.9578658169816637 0.8575722131972717 1.0458607211240631 0.920587414469604 0.9187947780913872 1.0 17.578874146807202 -5.478513318039148 24.99958937708444 0.9470400872527808 1.0013753198472524 0.07115591818801359 0.0786484017922351 1176.1982463128936 662777.6281663717 0.022390008546376683 0.033207722973476274 3.322665957945253e-06 5.478513318039148 0.054335232594471594 AEISFEDRK ddPTM_KYSE-520_SHP099_60min_R1 1 AEISFEDRK 9 1 Q60FE5;P21333-2;P21333;H0Y5C6 Q60FE5 FLNA Filamin-A 0 97.456 0.0071729 2684400000.0 3024500.0 2781700.0 2008800.0 1840200.0 3016900.0 2539000.0 1880300.0 2360800.0 2375500.0 2343600.0 False True 2856724.955808729 2648062.9565831763 2138290.462193641 2015092.0547236935 3254312.866187093 2523153.1592057706 2070379.0739595802 2352610.9358148626 1944169.0814818244 2322837.527293209 1.2298427773111003 1.1400121297630967 0.9205510230779593 0.8675131304047211 1.4010075297773097 1.0862374701453994 0.891314631192558 1.0128176887844362 0.836980227259956 1.0 21.147456816554936 -6.712368131546794 7.695420073470228 0.9365092230494816 1.103536013593633 0.24699050071056827 0.14730773182163143 0.37761235328304876 50.54261361310845 0.059739262788426194 0.045855833811888326 1.939241374587221e-07 6.712368131546794 0.16702679054415137 AEITFDDHK ddPTM_KYSE-520_SHP099_60min_R1 6 AEITFDDHK 9 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7 O75369-2 FLNB Filamin-B 0 ;;;;; 197.27 5.0013e-06 5324060000.0 4210770.0 4142980.0 2753280.0 2371490.0 3924670.0 4021100.0 2868670.0 3491280.0 3462010.0 3434120.0 False True 3977190.1941381074 3943945.02206024 2930760.8342037546 2596875.6965855346 4233519.200682329 3996002.82334869 3158663.15912122 3479169.5645508794 2833396.254170027 3403696.368504934 1.1684914761903629 1.1587241031704039 0.8610523727447184 0.7629575072015623 1.2438004869811266 1.1740185935280487 0.9280096745258907 1.0221738921086831 0.8324468305657329 1.0 21.698670914459115 -6.844992403496142 24.999994931230066 0.9475039479759204 1.0515569671793537 0.12628544784531315 0.14786638839525115 72.5414863378383 21697.115767364314 0.06746125228959295 0.04548237529580252 1.428918952366318e-07 6.844992403496142 0.10405301920343324 AEKDEPGAWEETFK ddPTM_KYSE-520_SHP099_60min_R1 6 AEKDEPGAWEETFK 14 1 Q14697;Q14697-2;F5H6X6;E9PKU7 Q14697 GANAB Neutral alpha-glucosidase AB 0 ;;;;; 226.67 2.9007e-14 6912430000.0 4901720.0 4417630.0 2768650.0 2517290.0 4537640.0 4342200.0 3227100.0 3508920.0 3758110.0 3673910.0 False True 4629811.820263433 4205400.423802186 2947121.6089966274 2756532.4847491616 4894726.452360111 4315098.71914269 3553326.7614609157 3496748.375508085 3075731.9582435978 3641362.015658727 1.2714505727126653 1.1548976470117387 0.8093459525098851 0.7570058876034333 1.3442020956201601 1.1850232689270483 0.9758235369569852 0.9602858382306486 0.8446652502599893 1.0 21.796046746589127 -4.534038523413752 23.77671032237396 0.9938546015406083 1.2423124487694794 0.2449214712572203 0.16553725283090265 155.54548177539274 331401.443804995 0.04586530498698836 0.12164853643253923 2.923893006977206e-05 4.534038523413752 0.2484578472288711 AEKDRES(ph)LRR ddPTM_KYSE-520_SHP099_60min_R1 4 AEKDRESLRR 10 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 AEKDRES(1)LRR;AEKDRES(1)LRR;AEKDRES(1)LRR;AEKDRES(1)LRR 112.44 0.0008324999999999999 2569790000.0 921520.0 815680.0 900360.0 689230.0 833390.0 651270.0 607530.0 633980.0 970840.0 541240.0 True False 870401.4485954242 776493.5084393593 958398.6462269347 754734.2119754445 898973.0516595397 647205.18235366 668945.0613214194 631780.8713520438 794559.9288847881 536445.0346783482 1.622536126403548 1.4474800925409699 1.7865738039715278 1.4069180683683318 1.6757971339944693 1.206470636347158 1.246996463901503 1.1777178098607228 1.4811581383378918 1.0 19.033070831328466 -6.2681985706265735 24.86266628123695 1.2351089463813791 1.5810493155237302 0.600714264202932 0.1487187620156544 353.5107857746117 1300332.7120790463 0.04850519973472723 0.043754278256375484 5.392640007434195e-07 6.2681985706265735 0.34594036914235105 AEKPPLSASS(ph)PQQRPPEPETGESAGTSR ddPTM_KYSE-520_SHP099_60min_R1 1 AEKPPLSASSPQQRPPEPETGESAGTSR 28 2 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 AEKPPLS(0.001)AS(0.224)S(0.775)PQQRPPEPETGESAGTSR 104.9 0.00097837 793610000.0 120350.0 109210.0 113040.0 100700.0 89238.0 100010.0 114420.0 124550.0 120560.0 109360.0 True False 113673.94558822282 103963.3876724479 120326.73927039487 110270.497723441 96260.52290523509 99385.80049317415 125986.69023158799 124117.96512018841 98669.34307027957 108391.15548079257 1.048738202706644 0.9591501004975513 1.1101158460453662 1.0173385202354583 0.8880846640876793 0.9169179907006876 1.1623336763294623 1.1450931081012667 0.9103080655668834 1.0 16.725887514665686 -6.751052908302475 24.99996881236871 1.0665248198962112 0.9907147947486905 0.10533617727950728 0.08915658207397321 440.81817854554015 1061039.178299258 0.03567701914760401 0.02732134033576535 1.7739733518809614e-07 6.751052908302475 -0.07581002514752067 AELGMGDSTSQS(ph)PPIKR ddPTM_KYSE-520_SHP099_60min_R1 7 AELGMGDSTSQSPPIKR 17 1 Q9NR19;Q9NR19-2 Q9NR19 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic 1 AELGMGDSTS(0.002)QS(0.997)PPIKR;AELGMGDST(0.002)S(0.061)QS(0.937)PPIKR;AELGMGDS(0.002)T(0.011)S(0.043)QS(0.944)PPIKR;AELGMGDSTSQS(1)PPIKR;AELGMGDS(0.083)T(0.085)S(0.239)QS(0.594)PPIKR;AELGMGDSTSQS(1)PPIKR;AELGMGDST(0.002)S(0.022)QS(0.977)PPIKR 199.99 7.7782e-13 10041780000.0 2848300.0 2616780.0 2196160.0 1936300.0 2182980.0 2451610.0 2010490.0 2151990.0 2887150.0 2308820.0 True False 2690299.121054717 2491065.96093314 2337727.987580238 2120325.3698301762 2354768.1065428443 2436308.5926114456 2213729.9496915382 2144525.2489682403 2362916.33912871 2288365.6510347803 1.1756421530965497 1.0885786368130024 1.0215710004750056 0.926567556575315 1.029017414886488 1.0646500446769802 0.9673847134921413 0.9371427367818178 1.0325781363044924 1.0 21.125886163742347 -4.5381445729597765 2.0615255942432857 0.9936097333821379 1.182169908035242 0.6664402670407117 0.04073253657819684 0.25920803200487197 1.7957585837138306 0.01171204165281055 0.07404298873207676 2.896379247045948e-05 4.5381445729597765 0.18856017465310404 AELKLS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 5 AELKLSR 7 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 AELKLS(1)R;AELKLS(1)R;AELKLS(1)R;AELKLS(1)R;AELKLS(1)R 98.044 0.0037042000000000004 2372630000.0 2849020.0 2376610.0 2188540.0 2068940.0 2262590.0 2616900.0 2464990.0 2683510.0 2963740.0 2684990.0 True False 2690979.1812194376 2262434.0882356614 2329616.790187809 2265571.435550505 2440642.960623904 2600566.956410234 2714175.2451840816 2674201.530145941 2425599.52580549 2661203.0774906096 1.0111889633604758 0.8501546189286054 0.8753998557616764 0.8513335395985011 0.9171201481268828 0.9772147711712581 1.0199053458721468 1.0048844271845605 0.911467278210394 1.0 21.34364717653123 -6.196397293226835 3.5205778398103793 0.986083233777826 0.8916182631365641 0.3984263499206364 0.050299799446211636 0.23644193073650588 5.82040372265231 0.01754970846399943 0.017151910575971062 6.362132458082753e-07 6.196397293226835 -0.09446497064126191 AELNEFLTR ddPTM_KYSE-520_SHP099_60min_R1 3 AELNEFLTR 9 0 E9PPU1;E9PL09;P23396;P23396-2;E9PQX2;E9PQ96;E9PJH4;F2Z2S8;E9PK82;H0YCJ7;H0YEU2;H0YES8;H0YF32 E9PPU1 RPS3 40S ribosomal protein S3 0 ;; 179.28 0.00022778 1171191000.0 651631.0 820258.0 511895.0 422111.0 739805.0 835437.0 580565.0 659878.0 636014.0 709605.0 False True 615483.7294358072 780851.5744476405 544892.5707609592 462228.30252770014 798023.4445853505 830222.7277933799 639254.1759683798 657589.0372346834 520529.89020820113 703318.4517643364 0.8751138661182739 1.1102389998283215 0.7747451661392475 0.657210544338997 1.13465449766523 1.1804364377341343 0.9089114246395132 0.9349804993528369 0.7401055509099839 1.0 19.42381854176354 -3.9674095897210906 17.303912216066895 0.9382394399878821 0.6438724894522422 0.01267501408135685 0.16627443730757807 42805724.513535134 592384500.0571299 0.043669305318840966 384127492.58482134 0.00010779296308837161 3.9674095897210906 -0.2943669505356399 AELPGS(ph)SSPLLAQPR ddPTM_KYSE-520_SHP099_60min_R1 1 AELPGSSSPLLAQPR 15 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 AELPGS(0.391)S(0.305)S(0.305)PLLAQPR 85.837 0.0027773000000000003 188010000.0 271680.0 312820.0 272820.0 235150.0 260670.0 358650.0 245530.0 258680.0 388780.0 328000.0 True False 256609.36881934688 297791.657647607 290406.4137274336 257498.58529957433 281183.2459905829 356411.5323155376 270350.56854187936 257782.69945636558 318187.352346245 325094.1751801386 0.7893385622094168 0.916016589600835 0.893299344925254 0.7920738203226534 0.8649285882614657 1.0963331844320054 0.8316069286448299 0.7929477644855527 0.9787543937689243 1.0 18.310498181452434 -6.027794037525413 24.994543517249184 0.926930174852425 0.8524064093319865 0.197853772182499 0.08780444070554853 1522.1771831492933 1368856.3944540708 0.02978650640973668 0.029858539791508286 9.380067475233098e-07 6.027794037525413 -0.07452376552043849 AELSYR ddPTM_KYSE-520_SHP099_60min_R1 2 AELSYR 6 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 0 ; 144.29 0.051963 570770000.0 599340.0 624080.0 503330.0 458730.0 667420.0 624240.0 474890.0 558390.0 572990.0 554080.0 False True 566093.4154453301 594098.2600368218 535775.4571564741 502327.56127779646 719942.1568996619 620343.8866099293 522896.5156797662 556453.0754192054 468949.4599024508 549171.2822677173 1.0308139440717574 1.0818086801327003 0.9756072002601316 0.9147010732307651 1.3109610428403555 1.1296000112174762 0.952155607118687 1.0132596029446752 0.8539220367933243 1.0 19.066896659256855 -6.778556098204873 24.400866002096432 0.9559392060150508 1.0733433518790774 0.2332105701983458 0.10577141865195787 313.43854018834224 446819.4265014775 0.04695846608185964 0.03175766860310983 1.6651137296702303e-07 6.778556098204873 0.11740414586402659 AELTKVEEEIVTLR ddPTM_KYSE-520_SHP099_60min_R1 1 AELTKVEEEIVTLR 14 1 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;A0A087WZ51;A0A087WYR3;O43399-6 O43399 TPD52L2 Tumor protein D54 0 75.574 0.016854 36056000.0 25605.0 25321.0 18073.0 27235.0 25110.0 25637.0 19729.0 24485.0 26503.0 16709.0 False True 24184.639607697965 24104.54115240413 19238.014497822423 29823.40621149867 27086.01414364347 25476.989973437718 21723.39985648491 24400.06724984195 21690.723286260934 16560.97125940529 1.460339446816143 1.455502867243653 1.1616477195983774 1.8008247067370151 1.63553294787954 1.5383753509607023 1.3117225744925907 1.473347599464294 1.3097494673775465 1.0 14.015499665311644 -8.283083262991406 0.9105113601207833 0.9990361975873138 1.4956628915028385 0.45824505800544746 0.16091743589251453 0.9773158766912788 1.5588336296549825 0.16404426021672153 0.055203691481342576 5.210947971691218e-09 8.283083262991406 0.4966266939155247 AELVLIDEDDEKS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 2 AELVLIDEDDEKSLR 15 1 C9JA33;B1ALY0;Q8IXS6;Q8IXS6-2 C9JA33 PALM2;PALM2-AKAP2 Paralemmin-2 1 AELVLIDEDDEKS(1)LR;AELVLIDEDDEKS(1)LR 136.49 9.2401e-06 135005000.0 142789.0 137595.0 132374.0 196861.0 167578.0 161635.0 145947.0 205427.0 236617.0 143863.0 True False 134868.20952718542 130984.72966569422 140907.03984588853 215570.61025158234 180765.43521160822 160626.17600954117 160700.74706545693 204714.4216840224 193653.31742916655 142588.48574372052 0.9458562437474016 0.9186206654941118 0.9882077021222169 1.5118374329259323 1.2677421621301492 1.1265017309899794 1.1270247118991799 1.435700930662544 1.3581273159547167 1.0 17.121497960909206 -5.092996310680105 7.985226179750436 1.2679580847669276 0.937362644457981 0.494736571616225 0.14418817901886657 0.23745558764012814 18.229739094814164 0.03975494326573071 0.06928443554423801 8.072418877177464e-06 5.092996310680105 -0.3305954403089466 AENGERS(ph)DLEEDNER ddPTM_KYSE-520_SHP099_60min_R1 7 AENGERSDLEEDNER 15 1 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER;AENGERS(1)DLEEDNER 260.31 6.3774999999999996e-27 8930470000.0 5339030.0 4821390.0 4533090.0 5050570.0 4851150.0 4729730.0 5234290.0 5475540.0 5432470.0 5169280.0 True False 5042863.362807559 4589763.187346065 4825300.234600444 5530574.654290764 5232907.905732214 4700210.000665733 5763423.114947558 5456546.6297406405 4446070.389424368 5123484.200838979 0.9842644507387729 0.8958285040860444 0.941800549284468 1.079455783895093 1.0213572835601439 0.9173854776201057 1.1249030716253186 1.0650070178506887 0.8677825899602298 1.0 22.288693811134085 -5.113910533188611 9.18368025216093 1.0147871366527048 0.9348130928042591 0.15833989746846433 0.07359080112151187 0.5687636420480665 42.02573454812993 0.019921620826616516 0.03459984183973481 7.692889012829122e-06 5.113910533188611 -0.07997404384844575 AEPLDPEADSHVEVFGDEPEQQLS(ph)PIFR ddPTM_KYSE-520_SHP099_60min_R1 1 AEPLDPEADSHVEVFGDEPEQQLSPIFR 28 0 Q9GZP1 Q9GZP1 NRSN2 Neurensin-2 1 AEPLDPEADS(0.082)HVEVFGDEPEQQLS(0.918)PIFR 95.56 0.0025124 265760000.0 40621.0 61277.0 54451.0 65125.0 66643.0 94967.0 72543.0 96899.0 117210.0 79846.0 True False 38367.672154044056 58333.160941347865 57960.99858468036 71314.46041945466 71887.42495319925 94374.27572678003 79876.35439145344 96562.87998539652 95927.61862365187 79138.62655924803 0.4848159972212768 0.7371010020963161 0.7323983382664242 0.9011334100682714 0.9083734211558487 1.1925184935592186 1.009321969110155 1.2201738162982096 1.212146619095475 1.0 16.27209440728923 -5.119871904364403 0.6121372648330604 1.1585416933861867 0.42877155270897743 0.8399490817046541 0.09111458461121313 0.5473459805537919 0.3052459673793827 0.05169342412744774 0.24804527859474798 7.588013513200448e-06 5.119871904364403 -0.7297701406772092 down AEPPKPEVVDSTESIPVS(ph)DEDS(ph)DAMVDDPNDEDFVPFRPR ddPTM_KYSE-520_SHP099_60min_R1 1 AEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPR 40 2 A6NL54;A6NHN7;A6NHB5;Q14202-3;Q14202-2;Q14202 A6NL54 ZMYM3 Zinc finger MYM-type protein 3 2 AEPPKPEVVDS(0.402)T(0.402)ES(0.373)IPVS(0.526)DEDS(0.297)DAMVDDPNDEDFVPFRPR 41.086000000000006 0.050813 92239000.0 67453.0 58551.0 56537.0 52558.0 66819.0 62248.0 61921.0 65807.0 78714.0 57604.0 True False 63711.24762577818 55738.122073157254 60181.46548239837 57553.0965178611 72077.27515189619 61859.48714227679 68180.57897072329 65578.73087646926 64421.52181846366 57093.67337523385 1.1159073126553267 0.9762574165938217 1.054082911899376 1.0080468310316593 1.2624389164485244 1.0834735879704362 1.1941879886169442 1.1486164227946851 1.1283478187691545 1.0 15.801043267066358 -5.71888950491392 24.999822300115405 1.1438739944758782 1.0352301747289863 0.3005337106020767 0.07230605111382898 152.6071406178748 89662.30315446183 0.019726275772147056 0.025466320662076193 1.9103392335366416e-06 5.71888950491392 -0.10864381974689197 AEPS(ph)PQSWSSLWK ddPTM_KYSE-520_SHP099_60min_R1 2 AEPSPQSWSSLWK 13 0 A0A0C4DGK3;Q8WXH0-7;Q8WXH0;Q8WXH0-2 A0A0C4DGK3 SYNE2 Nesprin-2 1 AEPS(0.998)PQS(0.001)WSSLWK;AEPS(0.543)PQS(0.346)WS(0.088)S(0.023)LWK 95.98100000000001 0.0029438000000000003 20442000.0 90646.0 83227.0 97256.0 94380.0 74516.0 73625.0 97563.0 101456.0 111380.0 76947.0 True False 85617.685681679 79228.64999372613 103525.27737510193 103349.84682361841 80379.98526195691 73165.4790651929 107425.62016312205 101104.07281600834 91156.19966131159 76265.30944386015 1.1226294930948026 1.0388556811933913 1.3574360102912606 1.3551357435938227 1.0539521290623703 0.9593546475944076 1.4085777786320972 1.325688882052361 1.1952511610591812 1.0 16.21873935175807 -6.779734247903615 24.99954692136958 1.25952006793127 1.1576122109231035 0.05318943422001965 0.15569240691957076 696.302681046721 951474.0014831164 0.0681540688739713 0.046045322362873314 1.6606027473461802e-07 6.779734247903615 -0.1019078570081664 AEPSEVDMNS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 AEPSEVDMNSPK 12 0 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK;AEPSEVDMNS(1)PK 257.55 1.8237000000000003e-21 11146530000.0 8216830.0 7699110.0 6360880.0 5935070.0 6300070.0 7114800.0 6613020.0 7642360.0 7930310.0 7904800.0 True False 7761026.060055485 7329233.199000286 6770912.502567852 6499137.268356132 6795849.666505134 7070393.894098951 7281528.59845566 7615850.436900242 6490365.610846617 7834769.62184133 0.9905876540925637 0.9354752663777454 0.8642133501529238 0.8295249997189711 0.867396234288759 0.9024380084372238 0.929386433795912 0.9720579933415275 0.828405418935758 1.0 22.901459422795032 -6.694303177248008 4.461346096171304 0.9302444522995129 0.8932622772464308 0.07399503681227626 0.05816493267979319 0.6239763564494837 24.134129513986828 0.024240314442067284 0.018070275154815157 2.021607419189654e-07 6.694303177248008 -0.0369821750530821 AEQGS(ph)EEEGEGEEEEEEGGESK ddPTM_KYSE-520_SHP099_60min_R1 2 AEQGSEEEGEGEEEEEEGGESK 22 0 Q5STZ8;Q8NE71 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 AEQGS(1)EEEGEGEEEEEEGGESK;AEQGS(1)EEEGEGEEEEEEGGESK 227.41 3.7489e-20 480320000.0 367360.0 356070.0 301130.0 290480.0 306830.0 321140.0 343830.0 388130.0 382360.0 330680.0 True False 346981.8084859955 338963.86272803403 320541.3216250357 318087.1318640037 330975.7753761103 319135.6461391654 378587.69185742846 386783.6676202233 312933.0625112147 327750.43246514717 1.0586768898402397 1.0342133195021164 0.9780042674974103 0.9705162842091107 1.0098408502063718 0.9737154082111001 1.155109663807041 1.1801164218489741 0.9547906928986031 1.0 18.322238158514388 -6.744471949612164 24.997060343666597 1.0875139187213387 1.0030670764817944 0.18602216050890286 0.06713881939151987 329.42557981903917 485322.2826360129 0.025612840617044094 0.01978805758713383 1.8010594582428058e-07 6.744471949612164 -0.08444684223954435 AERPDVDEKR ddPTM_KYSE-520_SHP099_60min_R1 2 AERPDVDEKR 10 2 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8Y5T0;A0A2R8Y542 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ; 114.86 0.00040155 1002420000.0 712860.0 735750.0 466320.0 378550.0 643230.0 659810.0 530510.0 554870.0 526300.0 502380.0 False True 673316.2347488204 700403.4656167341 496379.73333838035 414527.2781847925 693848.5415219343 655691.8810459072 584139.1280786559 552945.2854776322 430737.18694333173 497929.3040457259 1.3522325946234897 1.4066323470538593 0.9968879704513168 0.8325022745532679 1.3934679800613157 1.3168373014368593 1.1731366748903238 1.1104895433646822 0.8650569135890348 1.0 18.925581397568006 -1.0000000000000002 0.14729295689250244 0.9610234934574701 2.210904043374471 0.20263910357950998 0.18378917219058066 143.79667841227632 1.3974792407949426 0.7624276316156826 38.25273204399753 0.09999999999999995 1.0000000000000002 1.249880549917001 AES(ph)DGEEKEEVK ddPTM_KYSE-520_SHP099_60min_R1 1 AESDGEEKEEVK 12 1 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 AES(1)DGEEKEEVK 155.57 1.0457e-05 0.0 297190.0 253270.0 188720.0 279050.0 293980.0 337440.0 325000.0 335060.0 318640.0 316310.0 True False 280704.2782664226 241102.52903397934 200885.19316267612 305570.82810055854 317114.55348260835 335333.91179298755 357854.1716943377 333897.7550635916 260783.0082607322 313507.739485456 0.8953663431949973 0.7690480924958611 0.6407662965270923 0.9746835232906086 1.0115047048059227 1.0696192455833904 1.1414524320250121 1.0650383164753783 0.831823190995992 1.0 18.25814153334758 -5.420702369232887 5.565403110319544 1.0286639576204157 0.7697484603383402 0.5900498611642913 0.09396858876098663 0.15723440057737745 7.010481527867786 0.027720087951483906 0.04130159735079484 3.795750262783435e-06 5.420702369232887 -0.2589154972820755 AES(ph)DGEEKEEVKEELGR ddPTM_KYSE-520_SHP099_60min_R1 3 AESDGEEKEEVKEELGR 17 2 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 AES(1)DGEEKEEVKEELGR;AES(1)DGEEKEEVKEELGR;AES(1)DGEEKEEVKEELGR 113.99 0.00010774 2755840000.0 1125970.0 1062750.0 834690.0 1008610.0 968450.0 1167500.0 1292080.0 1279660.0 986620.0 1118770.0 True False 1063510.199534453 1011693.8947797288 888495.4529512201 1104467.9911503457 1044661.5052732573 1160213.1994378646 1422696.0558856004 1275221.158134889 807474.6786662183 1108858.5681898887 0.9591035593209485 0.9123741510436516 0.8012703138522062 0.9960404535208577 0.9421052740554394 1.0463130580591604 1.2830275173938754 1.1500304860488857 0.7282034894534365 1.0 20.08064393483906 -6.064717452176091 2.2280679856836185 1.0648979637052878 0.9072316363476628 0.14575355417296443 0.13942108169277265 0.5357412094601092 5.278032114366139 0.05284869313197975 0.055396828901480864 8.615540887156167e-07 6.064717452176091 -0.15766632735762498 AES(ph)GDSLGSEDRDLLYSIDAYR ddPTM_KYSE-520_SHP099_60min_R1 4 AESGDSLGSEDRDLLYSIDAYR 22 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AES(0.98)GDS(0.009)LGS(0.01)EDRDLLYSIDAYR;AES(0.931)GDS(0.058)LGS(0.01)EDRDLLYSIDAYR;AES(0.941)GDS(0.057)LGS(0.002)EDRDLLYSIDAYR;AES(0.974)GDS(0.02)LGS(0.007)EDRDLLYSIDAYR 188.29 9.042899999999999e-14 509619000.0 384163.0 477021.0 410339.0 620152.0 460945.0 404403.0 363211.0 409549.0 525347.0 428734.0 True False 362852.7125800455 454104.1951368814 436790.108505614 679091.059624502 497218.7490817105 401878.97087132395 399927.9124777601 408128.37010845495 429957.22772015753 424935.75031000446 0.8539001774158391 1.0686420118937925 1.0278968248422529 1.5981029111555876 1.170103359670193 0.9457405515495935 0.9411491318063959 0.9604472436379194 1.0118170274129437 1.0 18.696885198707655 -6.2595918280741305 24.531905409355176 0.9674411362164094 1.1583654288943181 0.18727620174932924 0.17762845307499361 223.4764377823074 2967347.1066000126 0.06459690704179129 0.06147554444698592 5.500576029592247e-07 6.2595918280741305 0.19092429267790878 AES(ph)GPDLR ddPTM_KYSE-520_SHP099_60min_R1 7 AESGPDLR 8 0 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 AES(1)GPDLR;AES(1)GPDLR;AES(1)GPDLR;AES(1)GPDLR;AES(1)GPDLR;AES(1)GPDLR;AES(1)GPDLR 115.82 0.0010107 18582130000.0 34535600.0 27449930.0 23503050.0 22834460.0 24602690.0 24070410.0 21886870.0 24046690.0 31996900.0 21992240.0 True False 32619841.42298826 26131194.15961507 25018094.20920961 25004640.212969255 26538781.732842535 23920177.642724745 24099408.414866596 23963277.644929644 26187069.53620958 21797405.86330379 1.4965010803374623 1.1988212874270174 1.1477555800035768 1.1471383507642476 1.217520190213135 1.0973864409706968 1.1056090144854465 1.0993637405849346 1.2013846831331356 1.0 24.37765311247792 AES(ph)IDKK ddPTM_KYSE-520_SHP099_60min_R1 1 AESIDKK 7 1 Q9NZZ3;Q9NZZ3-2 Q9NZZ3 CHMP5 Charged multivesicular body protein 5 1 AES(1)IDKK 60.398 0.026693 504180000.0 738530.0 472760.0 379500.0 567620.0 683220.0 715920.0 735070.0 430580.0 723200.0 907660.0 True False 697562.2686769444 450047.8999727725 403963.1772214685 621566.4341388236 736985.5270099605 711451.6777229608 809378.0491918684 429086.41847812734 591885.1103884048 899618.8385487952 0.7753975781589958 0.5002650908230863 0.44903814805958797 0.6909219855172141 0.8192197577796572 0.7908367935809648 0.8996899736976416 0.4769646878118968 0.657928763856473 1.0 19.778954346753473 -5.493399938335414 9.620717648518164 0.7551140877032915 0.5676756555222932 0.24764202256171564 0.1532441123720515 0.7086403619813397 224.4797752679816 0.044443523822203186 0.06456243247521917 3.2107024664429553e-06 5.493399938335414 -0.18743843218099832 AES(ph)KES(ph)VGSR ddPTM_KYSE-520_SHP099_60min_R1 2 AESKESVGSR 10 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 2 AES(1)KES(0.999)VGS(0.001)R;AES(1)KES(0.89)VGS(0.11)R 87.98899999999999 0.013030000000000002 556360000.0 1446120.0 1227090.0 1066760.0 1204750.0 1240140.0 1193310.0 1096360.0 1313700.0 1472360.0 1330600.0 True False 1365900.8408312518 1168138.7545003588 1135525.056476349 1319249.0777787059 1337731.9625686177 1185862.109654131 1207190.7682424744 1309143.081319884 1205016.539175156 1318811.919191135 1.0357055626771994 0.8857508318675279 0.8610212267210922 1.000331479099642 1.0143462787241768 0.8991897118896637 0.9153623429358136 0.9926685240476282 0.9137137158376814 1.0 20.330807400329125 -10.195770245121755 4.202287590227502 1.000021261779192 0.9447923357835702 0.07208828861484295 0.057353983254798756 1.2509724839169072e-05 2.3941352842140937e-06 0.0561262659776801 0.013606942152882759 6.371324940693804e-11 10.195770245121755 -0.05522892599562168 AES(ph)KESVGSR ddPTM_KYSE-520_SHP099_60min_R1 1 AESKESVGSR 10 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AES(0.878)KES(0.112)VGS(0.01)R 113.99 0.00096911 604340000.0 1146200.0 995080.0 882690.0 895650.0 989060.0 978180.0 855870.0 991630.0 1153900.0 990410.0 True False 1082618.0011069484 947274.8631544685 939589.6097539354 980772.3067130076 1066893.3950184004 972074.815782553 942389.6920862558 988190.2669781811 944380.8474518541 981635.7379273208 1.102871420913064 0.9649963082584955 0.9571672805411874 0.9991204158722499 1.0868526417661784 0.990260213870213 0.9600197463022982 1.0066771499830476 0.9620481518387578 1.0 19.904828247879323 -6.5030513677984425 24.482934593061703 0.981656577065646 1.0165710507328571 0.14743819242376077 0.04549252200335087 1376.3044614223993 1699471.2085926593 0.01667614091776426 0.014504176127264644 3.140137260472687e-07 6.5030513677984425 0.03491447366721112 AES(ph)LDDQMLSR ddPTM_KYSE-520_SHP099_60min_R1 1 AESLDDQMLSR 11 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AES(0.999)LDDQMLS(0.001)R 75.911 0.018043 171110000.0 514140.0 514190.0 487590.0 371940.0 503790.0 488500.0 468500.0 564710.0 622690.0 488370.0 True False 485619.6292873193 489487.5405850755 519020.8315715837 407289.06577216124 543435.4068270064 485451.09030012594 515860.55211937614 562751.152814305 509625.1927374941 484043.42174611107 1.003256335011273 1.011247170386751 1.072260892833327 0.8414308458173639 1.1226997050525922 1.0029081452009758 1.0657319755704762 1.1626046910921093 1.0528501573249374 1.0 18.884776946581106 AES(ph)LPLSSNLQSK ddPTM_KYSE-520_SHP099_60min_R1 8 AESLPLSSNLQSK 13 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 AES(0.855)LPLS(0.127)S(0.018)NLQSK;AES(0.997)LPLS(0.002)S(0.002)NLQSK;AES(1)LPLSSNLQSK;AES(1)LPLSSNLQSK;AES(1)LPLSSNLQSK;AES(0.999)LPLSS(0.001)NLQSK;AES(0.998)LPLS(0.002)SNLQSK;AES(1)LPLSSNLQSK 303.02 6.3748000000000005e-31 9414390000.0 6344680.0 7043770.0 5496830.0 5055670.0 5359940.0 6851860.0 5594620.0 6784860.0 7861120.0 7074780.0 True False 5992727.952593992 6705376.716285677 5851164.457038966 5536159.356757392 5781736.784113113 6809095.000171591 6160178.787829462 6761324.904258221 6433738.770708655 7012102.953295547 0.8546263499707362 0.9562575964653065 0.834437899159629 0.7895148422137056 0.8245367791406732 0.9710489200634816 0.8785066090528951 0.9642363994499732 0.9175191541768405 1.0 22.741415747554903 -6.260414311557668 24.999808122219036 0.9397922668338949 0.8532405956433184 0.4656822166904224 0.050303415828623944 100.13339124226006 2442116.0805611745 0.018009399085278984 0.017049988849062 5.490168686561592e-07 6.260414311557668 -0.0865516711905765 AES(ph)PAEKVPEESVLPLVQK ddPTM_KYSE-520_SHP099_60min_R1 8 AESPAEKVPEESVLPLVQK 19 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK;AES(1)PAEKVPEESVLPLVQK 296.45 4.0672e-44 66982200000.0 11563020.0 10615610.0 8743160.0 8525190.0 8496570.0 10589210.0 9349610.0 11146520.0 11734320.0 10362890.0 True False 10921596.230291093 10105620.161244532 9306758.083150608 9335421.494408175 9165201.72012969 10523118.812521985 10294759.822200308 11107855.323737318 9603663.28613506 10271082.856806422 1.0633344490112442 0.9838904331832703 0.9061126477996645 0.9089033380956318 0.8923306186802018 1.0245384015716068 1.0023052063471765 1.0814687680546151 0.9350195514946045 1.0 23.29208495392903 -6.290570155743574 24.651467762356223 1.0133606192500773 0.9479233722096613 0.20276056392784325 0.05672417236100516 939.7765670049918 795267.9286369113 0.0208536290034811 0.018394317913620846 5.121885248676618e-07 6.290570155743574 -0.06543724704041598 AES(ph)PESSAIESTQST(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 1 AESPESSAIESTQSTPQK 18 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 AES(0.969)PES(0.016)S(0.016)AIESTQS(0.261)T(0.739)PQK 166.47 2.9425000000000003e-07 390850000.0 887100.0 883010.0 803770.0 869570.0 910200.0 892400.0 880430.0 887990.0 1052300.0 1011400.0 True False 837890.794609992 840588.8741749688 855582.3002774714 952213.6713542469 981827.5616704226 886830.2005810284 969432.4565687574 884909.7699484245 861228.8463242801 1002439.782857292 0.8358514984528249 0.8385430113108705 0.8534999457411525 0.9498961310574848 0.9794379457605746 0.8846717935049053 0.9670730084210619 0.882756036902419 0.8591327489712021 1.0 19.93508414507427 -5.170450890719976 5.120844730282372 0.9283243988258323 0.8397646919907964 0.47374117578991815 0.04309901133950976 0.20714783244649107 8.84236425370033 0.0119162736372714 0.021103167316846586 6.753814206575646e-06 5.170450890719976 -0.08855970683503589 AES(ph)PSPAPPPGLR ddPTM_KYSE-520_SHP099_60min_R1 7 AESPSPAPPPGLR 13 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 AES(0.985)PS(0.015)PAPPPGLR;AES(0.649)PS(0.351)PAPPPGLR;AES(0.996)PS(0.004)PAPPPGLR;AES(0.927)PS(0.073)PAPPPGLR;AES(0.984)PS(0.016)PAPPPGLR;AES(0.966)PS(0.034)PAPPPGLR;AES(0.991)PS(0.009)PAPPPGLR 223.21 1.5794e-11 4243170000.0 5074860.0 5704140.0 4665780.0 3872030.0 4044590.0 5228560.0 4113050.0 5105100.0 6178740.0 5209340.0 True False 4793347.399317399 5430104.552311308 4966543.644311953 4240026.567031733 4362876.2224308625 5195926.617604141 4528837.233499676 5087391.599639296 5056836.569360146 5163189.300405197 0.9283694864608637 1.0516958097750093 0.9619139170284128 0.8212030046426894 0.844996371155416 1.0063405223582205 0.8771394907299374 0.9853195967926349 0.9794017370161686 1.0 22.29983106259085 -9.861821049538856 9.019531244239671 0.999999969696924 0.938757309422364 0.06367154185194035 0.06942163255877971 0.0 0.0 0.07120526654559846 0.017269813827515416 1.374608263834159e-10 9.861821049538856 -0.061242660274559935 AESGDS(ph)LGSEDRDLLYSIDAYR ddPTM_KYSE-520_SHP099_60min_R1 4 AESGDSLGSEDRDLLYSIDAYR 22 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 AESGDS(1)LGSEDRDLLYSIDAYR;AESGDS(0.998)LGS(0.002)EDRDLLYSIDAYR;AESGDS(0.999)LGSEDRDLLYSIDAYR;AESGDS(0.97)LGS(0.029)EDRDLLYSIDAYR 306.75 2.9932999999999996e-54 2937180000.0 804330.0 715400.0 765460.0 788510.0 738890.0 677130.0 640430.0 702440.0 835000.0 716930.0 True False 759712.211507897 681031.1101627077 814802.7763793034 863449.753325824 797036.4392909883 672903.78050138 705170.9143944755 700003.399590729 683385.0486370549 710578.5579630997 1.0691459839227921 0.9584177604724088 1.1466751525896959 1.2151362346211732 1.121672516513478 0.9469801374675365 0.9923898019324909 0.9851175380204481 0.9617304673476272 1.0 19.438634629772107 -6.258228836863144 24.977223416212137 0.9772600715542266 1.1029651197464612 0.5012325339347976 0.062326852252219386 277.2157036792417 2156674.684975782 0.023645287988250246 0.02271542841646821 5.517866172778057e-07 6.258228836863144 0.1257050481922346 AESSAGDGPVPYSQGSSSLIMPRPNS(ph)VAATSSTK ddPTM_KYSE-520_SHP099_60min_R1 1 AESSAGDGPVPYSQGSSSLIMPRPNSVAATSSTK 34 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 AESSAGDGPVPYSQGSSSLIMPRPNS(1)VAATSSTK 178.34 7.4694e-11 669010000.0 372640.0 568740.0 446070.0 343190.0 284730.0 480390.0 328770.0 442050.0 571480.0 456840.0 True False 351968.91636057704 541416.8767038553 474824.38593723526 375806.67441616434 307136.63110790943 477391.70781837794 362005.28008599224 440516.6317252454 467713.6378384485 452792.75301614153 0.7773289524093372 1.1957277873759486 1.0486572118796882 0.8299750203881184 0.6783161370450652 1.0543271831061296 0.7994944213983195 0.9728879907880096 1.032953011555322 1.0 18.788491342343043 -5.2469637235612865 24.03336696803572 0.9003702913258116 1.0260869807354045 0.07943375682083798 0.14562735544707997 1014.0612376140828 1683600.6594928287 0.0391778822392325 0.06742434389406243 5.6628658874764984e-06 5.2469637235612865 0.1257166894095929 AESSSGGGTVPSSAGILEQGPSPGDGS(ph)PPKPK ddPTM_KYSE-520_SHP099_60min_R1 3 AESSSGGGTVPSSAGILEQGPSPGDGSPPKPK 32 1 Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-7 Q68EM7-3 ARHGAP17 Rho GTPase-activating protein 17 1 AESSSGGGTVPSSAGILEQGPS(0.094)PGDGS(0.906)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.008)PGDGS(0.992)PPKPK;AESSSGGGTVPSSAGILEQGPS(0.001)PGDGS(0.999)PPKPK 246.7 1.8222e-31 4413100000.0 2462140.0 2844970.0 1935170.0 2070760.0 1866540.0 2833090.0 2366700.0 2981330.0 2963000.0 2910670.0 True False 2325560.186045594 2708293.3708129684 2059914.1545814783 2267564.4078033064 2013426.0788401524 2815407.6344286217 2605949.132766122 2970988.462077654 2424993.891151613 2884883.728266992 0.8061192079455504 0.9387877037387204 0.7140371497117183 0.7860158749501762 0.6979227825066135 0.9759171944582646 0.9033116680690518 1.029846864525936 0.8405863527152811 1.0 21.46008174329617 -6.277663423489828 24.830580389669837 0.9488840580577391 0.7926382690977503 0.5181881967188892 0.07774204835005845 648.8283270284445 993015.7557576231 0.027237177752066525 0.024092100490612767 5.276386208585064e-07 6.277663423489828 -0.15624578895998886 AET(ph)PPLPIPPPPPDIQPLER ddPTM_KYSE-520_SHP099_60min_R1 6 AETPPLPIPPPPPDIQPLER 20 0 U3KPW8;A0A669KB72;Q8IX15;Q8IX15-3 U3KPW8 HOMEZ Homeobox and leucine zipper protein Homez 1 AET(1)PPLPIPPPPPDIQPLER;AET(1)PPLPIPPPPPDIQPLER;AET(1)PPLPIPPPPPDIQPLER;AET(1)PPLPIPPPPPDIQPLER;AET(1)PPLPIPPPPPDIQPLER;AET(1)PPLPIPPPPPDIQPLER 159.04 4.7555e-08 568320000.0 336777.0 569164.0 382373.0 297046.0 324997.0 507750.0 346863.0 455605.0 539799.0 453287.0 True False 318095.30846169457 541820.5071074193 407021.3753984319 325277.1625298633 350572.4149200198 504580.9439097012 381927.29709665594 454024.6125940058 441785.10882543 449271.22983194975 0.708025102298846 1.2059986732515404 0.9059591364233996 0.7240106664553915 0.7803135203007584 1.1231098508098105 0.8501040612805679 1.0105802073367443 0.9833371902996773 1.0 18.777227152795536 -6.247695240176431 24.877626714204023 0.9851298985536747 0.8782716656891312 0.16110899381866195 0.14446115343327795 1800.0363358815102 3258162.9036315833 0.04919546398041571 0.04894657164077154 5.653335502306137e-07 6.247695240176431 -0.10685823286454355 AET(ph)PTES(ph)VSEPEVATK ddPTM_KYSE-520_SHP099_60min_R1 2 AETPTESVSEPEVATK 16 0 M0R0Q7;P18858-2;P18858-3;P18858;B4E135 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 2 AET(1)PT(0.003)ES(0.988)VS(0.01)EPEVATK;AET(0.995)PT(0.005)ES(0.981)VS(0.019)EPEVATK 281.09 1.5384000000000001e-21 0.0 758920.0 763190.0 663570.0 658810.0 682730.0 714110.0 668540.0 697720.0 831090.0 749530.0 True False 716821.1947304879 726525.2068284559 706344.7839495386 721423.1043215508 736456.9667976787 709652.974604346 736122.5475216381 695299.7721690725 680185.0060739771 742889.7473255168 0.9649092578153373 0.9779717777019067 0.950807016104955 0.971103864225818 0.9913408678057589 0.9552601542276943 0.9908907077688967 0.9359393835656323 0.915593476047713 1.0 19.502788589925714 -7.27689493484534 24.909103690693673 0.9443248211586386 0.9712821012678757 0.13040840617611027 0.02354508845171056 1222.8172711776922 1970754.5328884814 0.012051063509340675 0.005819950702318766 5.285731094865838e-08 7.27689493484534 0.026957280109237147 AET(ph)PTESVSEPEVATK ddPTM_KYSE-520_SHP099_60min_R1 4 AETPTESVSEPEVATK 16 0 M0R0Q7;P18858-2;P18858-3;P18858;B4E135 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 AET(0.899)PT(0.099)ES(0.001)VS(0.001)EPEVATK;AET(0.431)PT(0.027)ES(0.33)VS(0.212)EPEVATK;AET(0.761)PT(0.238)ES(0.001)VSEPEVATK;AET(0.893)PT(0.099)ES(0.007)VS(0.001)EPEVATK 238.67 2.2493e-22 1962780000.0 2331820.0 2694110.0 1943670.0 1817930.0 1878010.0 2534410.0 2001730.0 2471390.0 2807660.0 2607480.0 True False 2202469.2962320712 2564680.9116584463 2068962.0781819555 1990705.520619413 2025798.702584781 2518591.807098342 2204084.4034021767 2462817.3249167595 2297859.7193488777 2584379.755788741 0.8522235524012173 0.992377728510614 0.8005642644227097 0.7702836690933057 0.7838626262441513 0.9745440086569936 0.8528485020304224 0.9529626284218894 0.889133926313233 1.0 21.301386648465265 -6.265523535456579 24.971509931137195 0.9258923937296353 0.8422867329605196 0.31081291410480216 0.06945714080089595 539.4874698439162 3298545.6750871306 0.0254412174967893 0.02324895685953114 5.425958459657511e-07 6.265523535456579 -0.08360566076911569 AETEKQS(ph)PPHGEAK ddPTM_KYSE-520_SHP099_60min_R1 5 AETEKQSPPHGEAK 14 1 Q9Y6D6;E5RJN9 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 1 AETEKQS(1)PPHGEAK;AETEKQS(1)PPHGEAK;AETEKQS(1)PPHGEAK;AETEKQS(1)PPHGEAK;AET(0.093)EKQS(0.907)PPHGEAK 223.11 2.8338e-14 8304020000.0 5973840.0 5061380.0 4315608.0 4774660.0 4884860.0 5484230.0 5203990.0 5394220.0 5436100.0 5155400.0 True False 5642459.186645203 4818223.707513734 4593798.996896946 5228442.25084613 5269270.690948555 5450000.88629817 5730060.095248052 5375508.709840415 4449041.272929218 5109727.166840508 1.1042584080147864 0.9429512672969154 0.8990301922005407 1.023233155143003 1.031223491763592 1.0665933245254 1.121402358316347 1.0520148208156186 0.8707003578980106 1.0 22.284814830045875 -4.230993798870714 22.301717061056692 1.006717015395934 1.1042590942141537 0.14747008272434226 0.07339708270040951 5787.445384426798 4239063.848312129 0.01970898224429552 1.7582959292894749 5.8749774113149785e-05 4.230993798870714 0.09754207881821975 AETFAGYDCTNS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 4 AETFAGYDCTNSPTK 15 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 AETFAGYDCTNS(0.99)PT(0.009)K;AETFAGYDCTNS(1)PTK;AETFAGYDCT(0.1)NS(0.9)PTK;AETFAGYDCT(0.002)NS(0.811)PT(0.187)K 314.61 7.647599999999998e-43 2086850000.0 1456280.0 1457900.0 1074270.0 1008510.0 1114230.0 1481190.0 1097960.0 1337970.0 1430500.0 1296560.0 True False 1375497.245377794 1387860.295647486 1143519.163092774 1104358.4871804113 1201913.5618985198 1471945.3437904674 1208952.5118569687 1333328.8943545462 1170757.2599704291 1285073.487108416 1.0703646594350362 1.0799851600474257 0.889847292442273 0.8593738009997879 0.935287805682602 1.1454172532206992 0.9407652745036944 1.0375506986411425 0.9110430428416874 1.0 20.2934194318215 AETPT(ph)ESVSEPEVATK ddPTM_KYSE-520_SHP099_60min_R1 1 AETPTESVSEPEVATK 16 0 M0R0Q7;P18858-2;P18858-3;P18858;B4E135 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 AET(0.234)PT(0.739)ES(0.012)VS(0.015)EPEVATK 172.9 1.4232000000000002e-07 1015500000.0 1034800.0 1184700.0 946880.0 835820.0 834290.0 1143200.0 901130.0 1101000.0 1326900.0 1202500.0 True False 977397.5811773409 1127785.233729046 1007917.3998615675 915256.0815015532 899943.8765392402 1136064.8647514917 992225.0145812876 1097180.887975332 1085968.408426956 1191846.7855308428 0.8200698219293453 0.9462501786475314 0.845676988097632 0.7679309896312743 0.7550835287426727 0.9531970707505779 0.8325105429884223 0.9205720913923118 0.911164439599735 1.0 20.184767355491754 -7.834673641489957 0.7753376507044547 0.9971106616332652 0.8408549940522024 0.39198295044186304 0.06126245643354629 0.7018142163336385 0.9543441802259454 0.061959896659922575 0.0241151318890132 1.4632763671173246e-08 7.834673641489957 -0.1562556675810628 AETPTESVS(ph)EPEVATK ddPTM_KYSE-520_SHP099_60min_R1 3 AETPTESVSEPEVATK 16 0 M0R0Q7;P18858-2;P18858-3;P18858;B4E135 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 AETPTES(0.001)VS(0.999)EPEVATK;AETPTESVS(1)EPEVATK;AET(0.09)PT(0.2)ES(0.116)VS(0.595)EPEVATK 333.07 1.7828999999999995e-58 3930300000.0 2808200.0 3692700.0 2612800.0 2100920.0 2329640.0 3464080.0 2546250.0 3106370.0 3623930.0 3349250.0 True False 2652423.5479920874 3515297.1491442993 2781225.268627812 2300590.8051353698 2512969.4141615895 3442459.391784765 2803649.7990052546 3095594.7275022054 2965915.663841058 3319578.250677073 0.7990242578107896 1.0589589651719482 0.8378248857548526 0.6930370762207919 0.757014664031202 1.037017094289803 0.8445801205118187 0.9325265120262843 0.8934615905608249 1.0 21.66256852947863 -6.251048720322533 24.94078340392193 0.9312414148668816 0.834855588039428 0.23135414323757997 0.10126308304346744 1351.3497187625771 3243658.121538455 0.035990581860363434 0.03562422309562885 5.60985039692453e-07 6.251048720322533 -0.09638582682745356 AEVDNRS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 11 AEVDNRSPQK 10 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 AEVDNRS(1)PQK;AEVDNRS(1)PQK;AEVDNRS(1)PQK;AEVDNRS(1)PQK;AEVDNRS(1)PQK;AEVDNRS(1)PQK;AEVDNRS(1)PQK;AEVDNRS(1)PQK;AEVDNRS(1)PQK;AEVDNRS(1)PQK;AEVDNRS(1)PQK 173.06 2.3950999999999998e-05 20861600000.0 35432200.0 30793480.0 28619400.0 30192530.0 32718600.0 31409060.0 29739970.0 33557320.0 38098620.0 29550040.0 True False 33466705.233660396 29314114.998844218 30464252.316659033 33062018.973484814 35293367.676631376 31213024.40594075 32746376.401736766 33440917.48925735 31180870.996053506 29288249.63518323 1.1426666205909994 1.0008831310844168 1.0401527129864088 1.1288492615744523 1.2050350606898117 1.0657183271357171 1.1180721555445696 1.1417861396908344 1.0646205008645078 1.0 24.803818639671974 -5.260722020987346 24.964565449887633 1.1126190011761328 1.055199051351559 0.07466378782375438 0.06139899444003002 120.68982338454073 4200039.979209943 0.0164260701422895 0.02651024122629486 5.486280130748755e-06 5.260722020987346 -0.05741994982457377 AEVLGHKT(ph)PEPAPR ddPTM_KYSE-520_SHP099_60min_R1 8 AEVLGHKTPEPAPR 14 1 Q9UHD8;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;K7ENL0;K7EJ51;K7ER34 Q9UHD8 SEPT9 Septin-9 1 AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR;AEVLGHKT(1)PEPAPR 195.77 1.178e-10 20388580000.0 12294410.0 12666278.0 11205680.0 8532011.0 8845636.0 10759350.0 9230163.0 10411210.0 12645720.0 9999110.0 True False 11612414.569001278 12057770.992409123 11928016.06252192 9342890.760197364 9541737.228415852 10692196.905671777 10163237.95374993 10375095.942504674 10349576.020659389 9910525.66458987 1.1717253919731248 1.2166631115735183 1.2035704730719285 0.9427240366854953 0.9627882063318102 1.0788728335445217 1.0254993829502905 1.0468764517279547 1.0443014196147271 1.0 23.24053015081103 -5.247147707361827 24.797179065719604 1.01738432888705 1.1992540305571269 0.8202327173272361 0.039214353173495836 307.716046598254 533910.5383856968 0.011483642550675043 0.01976826614975678 5.660467388362962e-06 5.247147707361827 0.18186970167007677 AEVVETTQVYTEEETRR ddPTM_KYSE-520_SHP099_60min_R1 1 AEVVETTQVYTEEETRR 17 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 237.46 8.0016e-23 661660000.0 377910.0 299470.0 225510.0 352530.0 301840.0 259350.0 328610.0 379960.0 246020.0 228400.0 False True 356946.57895509235 285083.011686366 240046.73542875767 386034.34520799055 325593.0907653261 257731.30044900224 361829.1057245423 378642.007443331 201348.9696595072 226376.55369251134 1.5767824588403934 1.259330999771275 1.0603869151343943 1.7052752986616422 1.4382809767816378 1.1385070416748204 1.5983506234308036 1.6726202482861487 0.889442684656295 1.0 17.788365017309832 -7.7770083494475495 24.99820837156311 0.9447208668745488 1.4182911893750336 0.4601096626531652 0.21041347632329838 256.7023783804052 412160.41581487114 0.20461287483888835 0.05358485344528422 1.67105848737865e-08 7.7770083494475495 0.4735703225004848 AEVYGS(ph)ENESER ddPTM_KYSE-520_SHP099_60min_R1 4 AEVYGSENESER 12 0 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 AEVYGS(1)ENESER;AEVYGS(1)ENESER;AEVYGS(1)ENESER;AEVYGS(1)ENESER 238.67 2.7991e-15 3113700000.0 2261140.0 2022890.0 1935580.0 1965990.0 1961180.0 1965090.0 1996670.0 2022570.0 2232170.0 2039920.0 True False 2135710.056729163 1925707.3279802063 2060350.5838375003 2152837.0985035505 2115513.708412215 1952825.1443968771 2198512.8892213367 2015554.176741388 1826864.1964265567 2021847.8958337463 1.056315888613601 0.9524491589838935 1.0190433158117844 1.064786872909541 1.046326834363494 0.9658615509212644 1.087377984145904 0.99688714511842 0.9035616379407292 1.0 20.94724303630773 -7.531322798722741 24.3048951175086 0.9512619486718757 1.0253292032905204 0.3077521885754222 0.04510672486958493 168.54577136726485 485114.2938942781 0.029299472646810404 0.011119084078328748 2.9422339421599852e-08 7.531322798722741 0.0740672546186446 AFAAVPTSHPPEDAPAQPPTPGPAAS(ph)PEQLSFR ddPTM_KYSE-520_SHP099_60min_R1 2 AFAAVPTSHPPEDAPAQPPTPGPAASPEQLSFR 33 0 A0A0G2JNZ2;A0A669KB89;Q14160;A0A0G2JMS7;A0A0G2JPP5;Q14160-2;Q14160-3;H0YCG0 A0A0G2JNZ2 SCRIB Protein scribble homolog 1 AFAAVPTSHPPEDAPAQPPTPGPAAS(1)PEQLSFR;AFAAVPTSHPPEDAPAQPPT(0.014)PGPAAS(0.986)PEQLSFR 232.25 2.8015000000000003e-25 2921300000.0 773380.0 1144420.0 825970.0 1018490.0 905960.0 1263870.0 759690.0 1185550.0 1506810.0 1203620.0 True False 730479.0697051922 1089440.3453905582 879213.3477987276 1115286.9833798169 977253.8977927202 1255981.7185212278 836486.8790599118 1181437.6037594508 1233211.287588985 1192956.8632021905 0.6123264740222092 0.9132269397119956 0.7370034700489522 0.9348929687081153 0.8191862823686095 1.0528307915089763 0.7011878676103801 0.9903439430225338 1.0337434031593915 1.0 20.186110446079503 -2.4008685027249097 0.25892126773193563 0.9920602783378537 8.712662700421957e-18 0.3971262328128847 0.11304395322736505 28.052769482507596 0.7261182377023916 0.13899215569678197 10.574112797112 0.003973118307913423 2.4008685027249097 -0.9920602783378537 AFATVAGEQEAGHLWDCAT(ph)SLER ddPTM_KYSE-520_SHP099_60min_R1 1 AFATVAGEQEAGHLWDCATSLER 23 0 E7EV07 E7EV07 ARHGEF4 1 AFATVAGEQEAGHLWDCAT(0.5)S(0.5)LER 138.56 1.4091e-06 61348000.0 32634.0 42262.0 39727.0 33208.0 28682.0 31301.0 30199.0 31321.0 47237.0 30569.0 True False 30823.726965733847 40231.67008344474 42287.8659854474 36364.07833565072 30939.11022174359 31105.6388484836 33251.80963383789 31212.35476137636 38659.95154786658 30298.182442322122 1.0173457442344005 1.3278575426111037 1.3957228644308857 1.2002065934112085 1.0211540009253555 1.026650324906407 1.0974852929590253 1.0301725135094992 1.2759825320037774 1.0 14.886943630010123 -5.59342932631524 5.560039457980045 1.0765154919032678 1.261799077342879 0.3138946738249664 0.11663700477386224 0.22718699889821983 12.764128264426784 0.03465384194952635 0.04519346742131992 2.5501790502128663e-06 5.59342932631524 0.18528358543961132 AFATVAGEQEAGHLWDCATS(ph)LER ddPTM_KYSE-520_SHP099_60min_R1 1 AFATVAGEQEAGHLWDCATSLER 23 0 E7EV07 E7EV07 ARHGEF4 1 AFATVAGEQEAGHLWDCAT(0.208)S(0.792)LER 89.055 0.0023453000000000002 47522000.0 32124.0 37182.0 30567.0 31299.0 29938.0 30553.0 24718.0 28593.0 38321.0 28290.0 True False 30342.017682393656 35395.720908680196 32537.39772892924 34273.64754961252 32293.950276081174 30362.307393940082 27216.73666443274 28493.81755665637 31362.872393797137 28039.372609286962 1.0821218472036722 1.262357806713433 1.1604181799043707 1.222340029757324 1.1517358368205801 1.0828454622370451 0.9706613997282609 1.0162073864384145 1.1185297485368626 1.0 14.77516644845588 -6.31977896647454 2.699458872244265 1.0278945198196507 1.1853606961176204 0.609916847563495 0.056525570306801894 0.18125479178247983 2.6043922675799056 0.020906770439153972 0.018645785158491798 4.78873752390506e-07 6.31977896647454 0.15746617629796966 AFELMHSGK ddPTM_KYSE-520_SHP099_60min_R1 2 AFELMHSGK 9 0 P11766 P11766 ADH5 Alcohol dehydrogenase class-3 0 ; 129.38 0.00029462 0.0 1733410.0 1786530.0 1235970.0 1050730.0 1658170.0 1600480.0 1064110.0 1400120.0 1377390.0 1475420.0 False True 1637254.2918328326 1700702.4171637981 1315642.6038219212 1150591.0632865056 1788658.5453032774 1590490.8106520867 1171680.6235128057 1395263.3105104635 1127290.6971762783 1462348.926659391 1.1196057671222133 1.1629935825568696 0.8996776212824885 0.7868102080909861 1.2231407379559627 1.087627433956836 0.8012319099446451 0.954124754409894 0.7708766879266469 1.0 20.47985615879483 -6.754925267772879 24.996602446159198 0.8777353964625845 1.0414631088022503 0.266933454566903 0.13379859426326898 230.62042022777715 884963.0093233557 0.05468558366635518 0.04133134574257558 1.7582261387572036e-07 6.754925267772879 0.16372771233966588 AFFDEEEDHWK ddPTM_KYSE-520_SHP099_60min_R1 2 AFFDEEEDHWK 11 0 O15066-2;O15066 O15066-2 KIF3B Kinesin-like protein KIF3B;Kinesin-like protein KIF3B, N-terminally processed 0 ; 180.97 5.2631e-06 374550000.0 421300.0 388590.0 244760.0 236708.0 409610.0 416120.0 302450.0 291875.0 294240.0 376360.0 False True 397929.64915927197 369921.5531145181 260537.62122984658 259204.65715114446 441843.97663790494 413522.840728123 333024.59762754646 290862.5537491372 240813.4331867869 373025.74320364965 1.066761896221265 0.9916783488922993 0.6984440778598187 0.6948706942449124 1.1844865527060546 1.1085638143273246 0.8927657238008236 0.7797385543719532 0.645567866492574 1.0 18.508915671433883 -7.134922341329955 4.4113099820849975 0.7858677429835711 0.9491130187647406 0.12635639425597578 0.1703608251681202 0.48855458810834557 15.19781485457156 0.09118321306331341 0.050959411831662645 7.32955585384584e-08 7.134922341329955 0.16324527578116954 AFFSEVER ddPTM_KYSE-520_SHP099_60min_R1 6 AFFSEVER 8 0 Q9UQ80;Q9UQ80-2;F8VR77 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ;;;;; 160.54 0.0016782 1751630000.0 1620870.0 1732290.0 1407470.0 1151860.0 1631590.0 1704510.0 1369250.0 1381500.0 1488390.0 1473700.0 False True 1530957.10997576 1649068.1881797006 1498197.7682316215 1261332.4280806624 1759986.8505227894 1693871.520834121 1507667.1525922224 1376707.8989445246 1218135.8952585724 1460644.16452125 1.0481383126447887 1.129000634264821 1.0257103027708876 0.8635453170033954 1.2049388162240418 1.1596743149207152 1.032193322106199 0.9425347612953789 0.8339716988208667 1.0 20.478173327474515 -7.247633301922983 3.463877304123896 0.9110304231308815 1.070173516820275 0.32231187401627626 0.09454231619813322 0.29134738957162476 7.4583861357407235 0.056313300495013596 0.027398015118120164 5.654141827765846e-08 7.247633301922983 0.1591430936893936 AFGFSHLEALLDDSK ddPTM_KYSE-520_SHP099_60min_R1 2 AFGFSHLEALLDDSK 15 0 J3KR44;F5H6Q1;F5GYJ8;Q96FW1;F5GYN4 J3KR44 OTUB1 Ubiquitin thioesterase OTUB1 0 ; 225.33 2.632e-14 837580000.0 1691180.0 1477080.0 1031870.0 1110650.0 1864300.0 1542260.0 1024410.0 1153630.0 1218470.0 947200.0 False True 1597366.87411625 1406118.8596577202 1098385.9912503755 1216205.8420709008 2011009.8035840096 1532634.1832677007 1127967.3600781437 1149628.326789265 997226.5631290923 938808.5449104501 1.7014831008686842 1.4977695583201633 1.1699786896966804 1.2954780276173463 2.1420872386454826 1.6325311391513737 1.2014881694389954 1.2245609959791368 1.0622256993029549 1.0 19.84047144757594 -6.84013756777648 5.006424161094258 1.129221805849953 1.5643036343100976 0.4414592343693724 0.24930820227000114 0.23918528807387507 10.631503921177002 0.11741621548755579 0.07885491181427236 1.4449819835680152e-07 6.84013756777648 0.43508182846014454 AFGGEEVILKGS(ph)PEEK ddPTM_KYSE-520_SHP099_60min_R1 3 AFGGEEVILKGSPEEK 16 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 AFGGEEVILKGS(1)PEEK;AFGGEEVILKGS(1)PEEK;AFGGEEVILKGS(1)PEEK 187.33 2.8457e-12 1850300000.0 1812430.0 1593320.0 1510960.0 1392330.0 1750810.0 1484160.0 1539470.0 1488520.0 2024250.0 1535540.0 True False 1711890.8949103686 1516774.5155779226 1608358.8992214766 1524656.6245807218 1888588.7862537787 1474896.8069188013 1695094.65137933 1483356.6715431788 1656697.227189893 1521936.3102320419 1.1248111260643787 0.9966084029801928 1.056784629165105 1.0017874035400767 1.240911839448679 0.9690923312644609 1.1137750246072304 0.9746509506150222 1.0885457006655586 1.0 20.537476555737936 -10.12456977531644 4.5629538947358945 0.9999938809764449 1.0604268472558671 0.05234901609513998 0.07973769993334624 4.637785676841665e-06 8.897702092620435e-07 0.07213904075756637 0.017494515850939835 7.506374443146733e-11 10.12456977531644 0.060432966279422184 AFGPGLQGGSAGS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 10 AFGPGLQGGSAGSPAR 16 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR;AFGPGLQGGSAGS(1)PAR 328.64 4.584699999999999e-48 56713500000.0 5960680.0 6313550.0 5447760.0 4005690.0 4412080.0 5247150.0 4315940.0 5414140.0 6530270.0 5310540.0 True False 5630029.198079006 6010237.581168244 5798931.326324188 4386389.573245391 4759285.594698784 5214400.590518533 4752237.3347152695 5395359.612009776 5344537.582710304 5263492.747137598 1.0696374952052017 1.1418724922603423 1.101726857983755 0.8333609988597032 0.9042067355914924 0.9906730836390414 0.902867651389781 1.0250531103978229 1.0153975391372545 1.0 22.32758902981622 -5.152732217322833 9.106152055200852 0.9516495914098761 1.1094242412282904 0.5814143347218321 0.05881267332523184 0.25082702427024994 19.332446889516085 0.01665359879790341 0.02891997825970729 7.035059626100169e-06 5.152732217322833 0.15777464981841427 AFGSGIDIKPGT(ph)PPIAGR ddPTM_KYSE-520_SHP099_60min_R1 3 AFGSGIDIKPGTPPIAGR 18 1 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3;H7C5N8;A0A2R8YET2;A0A2R8Y7F4;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 AFGSGIDIKPGT(1)PPIAGR;AFGSGIDIKPGT(1)PPIAGR;AFGS(0.004)GIDIKPGT(0.996)PPIAGR 118.36 0.00019719 15744310000.0 11156800.0 11181800.0 9198340.0 7620720.0 8218830.0 9466670.0 7054420.0 9223300.0 10912800.0 9824900.0 True False 10537910.063470585 10644609.543776026 9791279.714264374 8344990.937546984 8865605.162254129 9407585.001047067 7767549.618104535 9191306.525034407 8931310.609301155 9737859.029656528 1.0821588227327499 1.0931160033594656 1.0054858757397447 0.8569636212777797 0.9104265255077157 0.9660835068978083 0.7976650303160644 0.9438734425136366 0.9171739477949887 1.0 23.21517318487396 -5.004866500295487 3.633880101257749 0.9084180302676801 1.085223425878248 0.635184852121817 0.053274051946480744 0.13005936425630982 3.7294665501682447 0.0141354043460961 0.029622201451561168 9.888570170811695e-06 5.004866500295487 0.17680539561056796 AFHAALRNS(ph)PVNTK ddPTM_KYSE-520_SHP099_60min_R1 2 AFHAALRNSPVNTK 14 1 Q9BPX5 Q9BPX5 ARPC5L Actin-related protein 2/3 complex subunit 5-like protein 1 AFHAALRNS(1)PVNTK;AFHAALRNS(1)PVNTK 193.27 5.0934999999999997e-11 1781820000.0 1761080.0 1672640.0 1836020.0 1573810.0 1648360.0 1351520.0 1322960.0 1443390.0 1906510.0 1370950.0 True False 1663389.3817740553 1592283.8637161748 1954372.7869358691 1723384.4292167712 1778076.5541145415 1343084.662359111 1456697.7076453574 1438383.2169797579 1560335.8432060278 1358804.449582961 1.2241565607800124 1.1718270897662078 1.4383031992099362 1.2683093801655607 1.308559561061389 0.9884311629766339 1.0720436690448294 1.0585652831952537 1.1483152293804455 1.0 20.37390641695534 -6.254362009700723 24.96884353026639 1.0582921853234204 1.2839948444948301 0.6948567799040382 0.07575924475150238 326.318239707302 1151246.561723082 0.025819610937406146 0.025281755542896883 5.567214957330877e-07 6.254362009700723 0.22570265917140975 AFHEDKKPSK ddPTM_KYSE-520_SHP099_60min_R1 1 AFHEDKKPSK 10 2 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 0 122.7 0.00067842 431000000.0 2310800.0 2495300.0 1908200.0 2246600.0 2623300.0 2253600.0 1755600.0 2005200.0 2385900.0 1330500.0 False True 2182615.317534403 2375422.042478343 2031205.625227949 2460116.1885350803 2829738.785464748 2239534.4464695225 1933073.1810048614 1998244.4292171986 1952680.7036444899 1318712.805113336 1.6551104297093857 1.8013187050793737 1.5402941545360804 1.8655435656618553 2.1458340091128085 1.6982730718816725 1.4658788278306925 1.5152991777049292 1.4807475108097308 1.0 20.33069897185657 -7.962950554929199 0.6945148955545027 1.0114308846483449 1.7867913470796628 0.6591678728042305 0.16735945178412284 0.49250775967093546 0.5529834254818944 0.18127760445106414 0.07329392769865462 1.0890540766970981e-08 7.962950554929199 0.775360462431318 AFHNEAQVNPER ddPTM_KYSE-520_SHP099_60min_R1 2 AFHNEAQVNPER 12 0 P17987;F5H282;E7EQR6 P17987 TCP1 T-complex protein 1 subunit alpha 0 ; 130.1 0.0001176 225300000.0 275710.0 226820.0 208455.0 184078.0 244310.0 262740.0 203504.0 227630.0 229493.0 233728.0 False True 260415.8166857414 215923.22673623913 221892.3428397925 201572.71777493102 263535.80706625 261100.14220154547 224076.170327645 226840.40465924135 187822.8562477408 231657.35175763266 1.1241422502239289 0.932080182640372 0.9578471874786144 0.8701330488566702 1.1376103761298697 1.1270962920905563 0.9672741599933364 0.9792065865303038 0.8107787420631791 1.0 17.821632942156487 -7.539037034546333 23.517830972229373 0.9019236258051145 1.011421382597432 0.1739908580783356 0.09540088924667964 221.987607102719 323081.9817572602 0.06614166983124978 0.025021245965878004 2.8904333895868197e-08 7.539037034546333 0.10949775679231755 AFHNEAQVNPERK ddPTM_KYSE-520_SHP099_60min_R1 1 AFHNEAQVNPERK 13 1 P17987;F5H282;E7EQR6 P17987 TCP1 T-complex protein 1 subunit alpha 0 109.0 0.00047188 93108000.0 177030.0 182510.0 135450.0 89310.0 154710.0 158370.0 98745.0 120370.0 165670.0 104100.0 False True 167209.79299944412 173741.94564690508 144181.32372766282 97797.99554796946 166884.79682051294 157381.55408563136 108727.10825833051 119952.4645645692 135588.50420083935 103177.75498857435 1.620599256283106 1.6839089556285154 1.3974070645715164 0.9478593090031797 1.617449389541315 1.5253438505524703 1.053784396359183 1.1625806800879943 1.3141253578918644 1.0 16.654772435246404 -1.0000000000000002 0.16870276119264327 1.0180563092239265 3.5629275075010236 0.39132914609537295 0.2055996805516397 68.85327536141907 0.7401768465322416 0.5791918184592869 44.150261724000735 0.09999999999999995 1.0000000000000002 2.544871198277097 AFHRLS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 AFHRLSR 7 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 AFHRLS(1)R;AFHRLS(1)R;AFHRLS(1)R 121.05 0.0016279 1337340000.0 634690.0 683940.0 648470.0 603870.0 596730.0 517860.0 551530.0 573470.0 704240.0 596260.0 True False 599482.4804768524 651082.495785131 690271.4137886859 661261.6232398644 643689.2560707435 514627.84364958695 607284.0348140863 571480.7664189045 576367.7684457008 590977.6002832606 1.0143912056726268 1.10170418552761 1.168016204772961 1.1189284042625576 1.0891939995055953 0.870807697961685 1.0275923055679435 0.9670091829960881 0.9752785353784015 1.0 19.172743923667568 -6.110997408508769 7.9394621518081605 0.9700008483749625 1.1054171367356167 0.6155308417869222 0.05148616640375698 0.19313875843324435 12.46595147358881 0.01700743674701658 0.01703026853314568 7.74466419129819e-07 6.110997408508769 0.13541628836065422 AFITNIPFDVK ddPTM_KYSE-520_SHP099_60min_R1 1 AFITNIPFDVK 11 0 A0A087X0X3;P52272-2;P52272;M0R2T0;M0QYQ7;M0R0N3;M0R019;M0R0Y6 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 125.74 0.0013966 84961000.0 201900.0 235580.0 183450.0 231970.0 204250.0 193010.0 168990.0 217540.0 215860.0 226180.0 False True 190700.2045223281 224262.383187211 195275.4805303782 254016.35905567606 220323.31297647057 191805.35299657573 186073.158383465 216785.40451421746 176665.26538777808 224176.2211653774 0.8506709745171694 1.0003843495147955 0.8710802578223549 1.1331101832976533 0.9828130380248291 0.8556007947652873 0.830030756233493 0.9670312194007961 0.7880642490509734 1.0 17.774273731054027 -6.2544229579968205 23.878118226506675 0.8824526886569544 0.973263962235076 0.15363663334176436 0.09230234400355108 515.6444002888335 1754829.927507112 0.03005672708055819 0.02940583099995424 5.566433716786507e-07 6.2544229579968205 0.09081127357812169 AFKES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 AFKESPK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFKES(1)PK;AFKES(1)PK;AFKES(1)PK;AFKES(1)PK;AFKES(1)PK;AFKES(1)PK;AFKES(1)PK 108.43 0.0037046999999999996 10093160000.0 17543600.0 15814100.0 15715800.0 15217400.0 14521790.0 14919900.0 14685500.0 17876700.0 20308400.0 14628850.0 True False 16570421.535700426 15054366.898551974 16728865.61416907 16663657.120721875 15664572.25531743 14826779.369844118 16170053.656668311 17814689.900153145 16620906.493102722 14499249.77007309 1.1428468230061324 1.0382859208084452 1.1537745662329355 1.1492771960599086 1.080371226354732 1.0225894170363945 1.1152338164450284 1.2286628744697694 1.1463287243598492 1.0 23.78947491748647 -7.00931534157562 24.970988706028553 1.146887149008566 1.0967069842739214 0.0019729768175982265 0.06751735174696298 1055.9829663037226 2830697.722079165 0.029134510029588626 0.01842224084853291 9.787790350777493e-08 7.00931534157562 -0.05018016473464448 AFKPEETSSNSDPPS(ph)PPVLNNSHPVPR ddPTM_KYSE-520_SHP099_60min_R1 4 AFKPEETSSNSDPPSPPVLNNSHPVPR 27 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 AFKPEETSSNSDPPS(1)PPVLNNSHPVPR;AFKPEETSSNSDPPS(1)PPVLNNSHPVPR;AFKPEETSSNSDPPS(1)PPVLNNSHPVPR;AFKPEETSSNSDPPS(1)PPVLNNSHPVPR 226.1 6.296899999999999e-23 15102900000.0 14974680.0 15383570.0 13066010.0 11541190.0 11955550.0 13653580.0 12922100.0 15249010.0 17703930.0 15368360.0 True False 14144004.649115516 14644520.205990665 13908265.910955181 12638061.227614691 12896383.767225668 13568362.94268164 14228391.975542797 15196114.743455686 14489342.591756914 15232208.286803143 0.9285590364050875 0.9614180642919885 0.9130827027230847 0.8296933044543539 0.8466522728945886 0.8907679495452394 0.9340990949992437 0.9976304457851507 0.9512305976218935 1.0 23.860621775667212 -7.006651645117325 3.335131567966143 0.9803329510669706 0.8939574153639924 0.5225731689926656 0.03755711543492512 0.2328011627500772 5.394569972848275 0.021334904882785128 0.012496772076199838 9.84800714197757e-08 7.006651645117325 -0.08637553570297818 AFKQS(ph)PPAVPALGAGVK ddPTM_KYSE-520_SHP099_60min_R1 1 AFKQSPPAVPALGAGVK 17 1 A0A0C4DFW9;O15350-12;O15350-4;O15350-10;O15350-9;O15350-3;O15350-2;O15350-6;O15350-5;O15350-13;O15350-11;O15350-8;O15350 A0A0C4DFW9 TP73 Cellular tumor antigen p53;Tumor protein p73 1 AFKQS(1)PPAVPALGAGVK 131.56 2.0725e-05 1977800000.0 2851100.0 2656900.0 2351400.0 1912600.0 1829000.0 2937200.0 1946500.0 2793000.0 3222600.0 2766000.0 True False 2692943.7994730547 2529258.5359117975 2502975.0063730227 2094372.928955843 1972931.8944135373 2918867.845300978 2143271.216009318 2783311.7348910985 2637457.075135057 2741495.3919154345 0.9822901061276423 0.9225835445029325 0.9129962478704873 0.7639527445977363 0.7196553750305904 1.0646991615993986 0.7817891003317908 1.0152531144495003 0.9620505228324722 1.0 21.386531617984843 -7.28791523521815 24.77521324304042 0.9914888861211011 0.877991755868856 0.21863744214566305 0.09888660394855528 1139.976678584039 1066744.940994315 0.05503005842033507 0.026447834790948258 5.1532921575590016e-08 7.28791523521815 -0.11349713025224506 AFLAELEQNS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 14 AFLAELEQNSPK 12 0 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK;AFLAELEQNS(1)PK 290.64 1.1502999999999998e-29 20706520000.0 8927340.0 8180500.0 7480080.0 6401775.0 7413380.0 7927160.0 6803870.0 7813460.0 9446180.0 7337600.0 True False 8432122.653988918 7787496.500819167 7962257.925351154 7010197.771236156 7996770.829637734 7877683.654009298 7491671.578972176 7786356.930935274 7730991.83081962 7272594.57256641 1.1594380203451002 1.0708003069764214 1.0948304413099397 0.963919781487605 1.0995760522390527 1.083201266811352 1.0301236380248895 1.0706436132583097 1.0630307730864539 1.0 22.79403872152778 -4.006298618883503 1.465317260395024 1.0516696191450212 1.263943312771179 0.39870903007948566 0.040324041353894106 2.3272861520374177 2.855720296844024 0.011099556881622983 0.8579337751191686 9.85601557500832e-05 4.006298618883503 0.21227369362615778 AFLASLS(ph)PAMVVPEDQLTR ddPTM_KYSE-520_SHP099_60min_R1 4 AFLASLSPAMVVPEDQLTR 19 0 Q9H211;H3BSY1 Q9H211 CDT1 DNA replication factor Cdt1 1 AFLAS(0.001)LS(0.999)PAMVVPEDQLTR;AFLAS(0.006)LS(0.994)PAMVVPEDQLTR;AFLAS(0.001)LS(0.999)PAMVVPEDQLTR;AFLASLS(1)PAMVVPEDQLTR 283.22 1.4868999999999999e-43 485282000.0 337812.0 468510.0 358276.0 285160.0 261191.0 414944.0 307936.0 435370.0 511710.0 447694.0 True False 319072.894948473 446002.0763521532 381371.0442218682 312261.5206635199 281745.2457264989 412354.18058033887 339065.17604574625 433859.80308612157 418796.36315936217 443727.77946066175 0.7190735169573942 1.0051254327467525 0.8594707428176205 0.7037231724438455 0.6349506584170864 0.9292953916059603 0.7641288009010166 0.9777611931654709 0.9438137131472747 1.0 18.759315349965007 -7.2693193562858935 24.377466448678316 0.9705906154422642 0.8069180203078573 0.36251099198596604 0.10412830987847443 539.751482438646 1669758.5748295395 0.05827590355494115 0.028822757264521468 5.378741140048124e-08 7.2693193562858935 -0.1636725951344069 AFLS(ph)PPTLLEGPLR ddPTM_KYSE-520_SHP099_60min_R1 1 AFLSPPTLLEGPLR 14 0 Q96PC5;Q96PC5-12;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-6;G3V599;Q96PC5-14;Q96PC5-7 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 AFLS(0.983)PPT(0.017)LLEGPLR 64.82 0.038517 15194000.0 34772.0 41092.0 30231.0 34729.0 38181.0 40727.0 32195.0 40165.0 48971.0 34402.0 True False 32843.12784373652 39117.8786396505 32179.738631310236 38029.63371834543 41185.62747982681 40472.80768608642 35449.58479292064 40025.67698958149 40079.10085844938 34097.22504435099 0.96321996294469 1.1472452256384218 0.9437641505856668 1.1153292876144458 1.207887956461436 1.1869824489659369 1.0396618712171037 1.1738690446955502 1.1754358545693275 1.0 15.057366711829534 -5.499851193054177 23.40192377619657 1.1397837333529464 1.0307521760676868 0.27753596017859117 0.08034974332870592 432.70416215494635 439737.91245402873 0.021725935462208894 0.031924882687508364 3.163361370708784e-06 5.499851193054177 -0.1090315572852596 AFMES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 AFMESPK 7 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK;AFMES(1)PK 152.38 0.0012747 11799800000.0 19231500.0 17940400.0 17315300.0 15641800.0 16142500.0 15731800.0 15782300.0 17898000.0 20605500.0 16507200.0 True False 18164690.3579552 17078516.254910596 18431471.943459556 17128391.969121337 17412822.911738914 15633612.000785097 17377728.904404763 17835916.01542461 16864060.62238423 16360959.050407251 1.1102460621037402 1.043857893800271 1.1265520490989045 1.0469063528824725 1.0642910881991041 0.9555437399860708 1.0621461034689286 1.0901510089031512 1.0307501272038486 1.0 23.963753983194934 -5.439331667532985 7.1697676398034575 1.0375298033709648 1.0886838899582654 0.3026587611946615 0.04022299192066206 0.3880542509405004 28.897090754965507 0.011521749932175114 0.017094514387129202 3.636372229598566e-06 5.439331667532985 0.051154086587300585 AFMGT(ph)PVQK ddPTM_KYSE-520_SHP099_60min_R1 4 AFMGTPVQK 9 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK;AFMGT(1)PVQK 170.52 0.0003903 7780470000.0 11200400.0 11312500.0 9259100.0 7688040.0 7659110.0 8534900.0 8651760.0 10526900.0 11127700.0 10655700.0 True False 10579091.484556146 10769030.519591307 9855956.401083795 8418709.010106487 8261838.382625283 8481630.5232396 9526364.333840625 10490384.640896931 9107190.186489295 10561298.788009161 1.0016847072414223 1.0196691463570746 0.9332144274029838 0.7971281921940058 0.782274845969268 0.8030859360658628 0.9020068956534442 0.9932854709884031 0.8623172556039417 1.0 23.332283926919423 -4.955222040223057 4.317934244120174 0.8702767138137786 1.0080895079371592 0.3528233239969295 0.07142516920190059 0.2267835801195281 9.219089222263676 0.02064855036872465 0.04451933347986766 1.1086078762690311e-05 4.955222040223057 0.13781279412338066 AFQLEEGEET(ph)EPDCK ddPTM_KYSE-520_SHP099_60min_R1 2 AFQLEEGEETEPDCK 15 0 P38432 P38432 COIL Coilin 1 AFQLEEGEET(1)EPDCK;AFQLEEGEET(1)EPDCK 331.85 1.7171999999999999e-53 723470000.0 846070.0 834170.0 812780.0 709710.0 658570.0 701990.0 743590.0 941270.0 1029830.0 1141030.0 True False 799136.8105012695 794095.2210853035 865173.0992939813 777160.6250179083 710395.7122492742 697608.6200200306 818759.3339390537 938004.9540640702 842838.8319016759 1130921.3619079061 0.706624560661845 0.7021666119610964 0.7650161438584928 0.687192453157671 0.62815659530103 0.6168498036354527 0.723975478328375 0.8294166028322439 0.7452674078768622 1.0 20.109067185009316 -8.282959863857721 0.8000398451527745 0.9985383192177824 0.6886927910124484 0.750832103184034 0.05223691895299796 0.5535178514751754 0.7003763881919058 0.05670829629278189 0.019992563487877844 5.2124288052146475e-09 8.282959863857721 -0.30984552820533395 AFQQSVEQDNLFDIS(ph)TEEGSTKR ddPTM_KYSE-520_SHP099_60min_R1 2 AFQQSVEQDNLFDISTEEGSTKR 23 1 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 AFQQSVEQDNLFDIS(0.967)T(0.032)EEGS(0.001)T(0.001)KR;AFQQSVEQDNLFDIS(0.775)T(0.219)EEGS(0.003)T(0.003)KR 151.31 2.5197e-07 278850000.0 212958.0 241217.0 199277.0 184479.0 187872.0 194183.0 150438.0 240611.0 287720.0 221189.0 True False 201144.795218752 229628.57324590135 212122.7142744736 202011.82869436598 202656.45755454336 192971.03186847368 165645.74117339338 239776.37660002976 235477.30083096225 219229.43754243793 0.9175081479640017 1.0474349422232605 0.9675831706378911 0.9214630615254897 0.9244034917314131 0.8802240886610805 0.7555816546823374 1.093723449222527 1.074113510807047 1.0 17.742082006973504 -7.333054442859697 24.999972131538588 1.0629392115760823 0.9224475457575464 0.4363933881510025 0.07235284834752828 159.8175730466805 55789.166100170434 0.042384391793348915 0.020360804685632068 4.644570475548044e-08 7.333054442859697 -0.1404916658185359 AFS(ph)DPFVEAEK ddPTM_KYSE-520_SHP099_60min_R1 8 AFSDPFVEAEK 11 0 P34932;A0A087WYC1;A0A087WTS8;P34932-2 P34932 HSPA4 Heat shock 70 kDa protein 4 1 AFS(1)DPFVEAEK;AFS(1)DPFVEAEK;AFS(1)DPFVEAEK;AFS(1)DPFVEAEK;AFS(1)DPFVEAEK;AFS(1)DPFVEAEK;AFS(1)DPFVEAEK;AFS(1)DPFVEAEK 223.22 5.762e-10 5227790000.0 10445110.0 9943170.0 9095260.0 8069800.0 8692510.0 9430190.0 8776910.0 8873820.0 10872730.0 9047970.0 True False 9865698.926489426 9465485.188197555 9681555.012530537 8836751.365726162 9376561.083383601 9371332.686258627 9664165.717186926 8843038.789585164 8898516.311218657 8967812.025014142 1.1001232964039374 1.0554954945303539 1.0795894233203744 0.9853854363893435 1.0455795747311971 1.0449965565869284 1.0776503443906305 0.9860865465198262 0.9922728405097925 1.0 23.09632460734462 -1.0000000000000002 0.20729234754878514 0.9966084918509805 1.4592833362371616 0.43845435107012287 0.030490405849734902 55.331286013834145 0.6828586984365523 0.05567654405475549 8.409931352862655 0.09999999999999995 1.0000000000000002 0.462674844386181 AFS(ph)FSK ddPTM_KYSE-520_SHP099_60min_R1 3 AFSFSK 6 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C103 Q9H8V3-2 ECT2 Protein ECT2 1 AFS(0.939)FS(0.061)K;AFS(0.997)FS(0.003)K;AFS(0.984)FS(0.016)K 133.58 0.0070215 2373420000.0 2145630.0 2658600.0 2533680.0 2784900.0 3250500.0 2264650.0 2477490.0 2671390.0 2927810.0 2653820.0 True False 2026607.6266926366 2530876.8653600435 2697005.0668313373 3049576.058689282 3506295.8571849097 2250515.4793207385 2727938.8671723222 2662123.5715971114 2396193.5080839004 2630309.2194407177 0.770482653413485 0.9621974658546737 1.0253566565093062 1.159398308058135 1.3330356108969017 0.8556087104463198 1.0371171750492376 1.0120952897557642 0.9109930841490198 1.0 21.326800982199284 -4.318485121065436 2.14442575934357 1.049817925312393 0.7161231752730967 0.3042928136093864 0.12397584629414192 0.7448379995104426 4.2682982782947185 0.03488159654746282 0.45608573705691124 4.803025351288795e-05 4.318485121065436 -0.3336947500392963 AFS(ph)PQPPK ddPTM_KYSE-520_SHP099_60min_R1 4 AFSPQPPK 8 0 Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;A0A1B0GUA8;Q9H1H9;H0Y9Z7;H0Y307 Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 AFS(1)PQPPK;AFS(1)PQPPK;AFS(1)PQPPK;AFS(1)PQPPK 122.98 0.0009095 1565410000.0 3233410.0 3132860.0 2557420.0 2232900.0 2370980.0 2830660.0 2392900.0 2852200.0 3333670.0 2956400.0 True False 3054046.3016569694 2982352.70308127 2722275.3852166766 2445114.144654137 2557562.6369691677 2812992.8009599885 2634797.6844534785 2842306.3839084837 2728359.5629819096 2930208.596044394 1.04226241974027 1.0177953566538804 0.9290380858521762 0.8344505397857662 0.8728261327271116 0.9599974570948158 0.8991843406678615 0.9700013807021884 0.93111444921192 1.0 21.482571940376765 -4.740770978209929 4.19516688333981 0.9181767947312485 1.035191733982972 0.46091393948311465 0.045620478900816545 0.16972907195461218 6.699142579461949 0.012367596588296597 0.03311820801169327 1.8164733132064013e-05 4.740770978209929 0.11701493925172346 AFS(ph)TEK ddPTM_KYSE-520_SHP099_60min_R1 5 AFSTEK 6 0 H0YJD9;Q9NZ32 H0YJD9 ACTR10 Actin-related protein 10 1 AFS(0.965)T(0.035)EK;AFS(0.98)T(0.02)EK;AFS(0.935)T(0.065)EK;AFS(0.968)T(0.032)EK;AFS(0.852)T(0.148)EK 113.26 0.0087547 6168900000.0 14178200.0 13594000.0 12977100.0 13137400.0 14608300.0 15018000.0 14947000.0 15943000.0 18596100.0 16092100.0 True False 13391706.98245903 12940923.834990008 13813624.630094146 14385974.546096655 15757890.100142827 14924267.091355773 16457988.628662348 15887697.454124194 15219517.009532388 15949536.513464343 0.8396298520119356 0.8113667644238745 0.8660831378035911 0.9019681878499883 0.9879842017252519 0.9357179174928968 1.0318788019180858 0.9961228303225022 0.95422942207031 1.0 23.92701116472569 -5.456520823068474 1.3270467868097104 0.9887826650667998 0.8226287169227463 0.859524868911079 0.026682714241688516 0.15030720365540115 0.5309887171130296 0.009374157710600028 0.018352367961624347 3.4952575052514567e-06 5.456520823068474 -0.1661539481440535 AFS(ph)WLR ddPTM_KYSE-520_SHP099_60min_R1 4 AFSWLR 6 0 Q9P206-2 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 AFS(1)WLR;AFS(1)WLR;AFS(1)WLR;AFS(1)WLR 107.32 0.009792100000000001 2464480000.0 1085580.0 1293090.0 1132390.0 1298950.0 1392110.0 1078980.0 1141050.0 1267260.0 1440380.0 1198850.0 True False 1025360.7133499217 1230968.0154323382 1205385.6712880607 1422401.8174564429 1501661.1369775974 1072245.6855926916 1256398.4695748435 1262864.1708407088 1178843.301024961 1188229.1216911862 0.8629318156169606 1.035968562763655 1.0144387553575995 1.1970770548292593 1.2637807890453894 0.9023896704926594 1.057370541286375 1.0628120013110736 0.9921010009813036 1.0 20.180381621671586 -4.146665556898943 1.9144607672678091 1.069782742071196 0.7547368090037889 0.2655644494064381 0.09786777861167664 1.6319699796152898 4.9077841733110725 0.027681513313952348 1.0055832260902782 7.134021980502605e-05 4.146665556898943 -0.31504593306740714 AFSCS(ph)S(ph)S(ph)FRK ddPTM_KYSE-520_SHP099_60min_R1 1 AFSCSSSFRK 10 1 Q7L945 Q7L945 ZNF627 Zinc finger protein 627 3 AFS(0.246)CS(0.948)S(0.915)S(0.891)FRK 64.82 0.027998000000000002 2205100000.0 296990.0 1819300.0 1102000.0 861330.0 1692200.0 508960.0 852710.0 864220.0 1771100.0 340730.0 True False 280515.37266511313 1731898.097175026 1173036.6832623407 943190.5442316921 1825366.5126990608 505783.39185087447 938910.248447628 861222.2225304642 1449512.8857977097 337711.3972839286 0.8306363804158843 5.128337720029462 3.4734885843255032 2.792889288953168 5.405107815074409 1.4976793674086175 2.7802148698530464 2.5501722164455036 4.292164544802263 1.0 18.365431343529135 -6.2966660044853295 24.94396598077403 2.543192864902286 3.571451709788532 0.12596572945250406 1.431911012074565 1366.6271091848405 967704.0265677248 0.48239302250778276 0.4254465568917949 5.050495581728166e-07 6.2966660044853295 1.028258844886246 AFSFS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 AFSFSK 6 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C103 Q9H8V3-2 ECT2 Protein ECT2 1 AFS(0.046)FS(0.954)K 151.04 0.0068268 731340000.0 915420.0 1117700.0 1064600.0 1161400.0 1337200.0 937710.0 1064100.0 1121500.0 1230100.0 1137300.0 True False 864639.8277554712 1064004.0142980958 1133225.8194202262 1271779.106812356 1442430.0323727615 931857.4040641377 1171669.6126152165 1117609.778260067 1006744.8482975354 1127224.4068060098 0.7670520816750482 0.9439149896629289 1.005324061986221 1.1282395050475724 1.279629879963198 0.8266831328684193 1.0394288888182808 0.9914705284166213 0.8931183908181574 1.0 20.104343323838787 -4.324217527146339 2.150438059501163 1.0269442943309535 0.7183992760316147 0.3047532786720879 0.11601734435019698 0.7266929640522782 4.234798632508772 0.03228360659057027 0.4101608891123465 4.74004508895494e-05 4.324217527146339 -0.3085450182993388 AFSSPQEEEEAGFTGRRMNS(ph)KMQVY(ph)SGSK ddPTM_KYSE-520_SHP099_60min_R1 1 AFSSPQEEEEAGFTGRRMNSKMQVYSGSK 29 3 Q14241;A0A024RAC6 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 2 AFS(0.001)S(0.001)PQEEEEAGFT(0.247)GRRMNS(0.679)KMQVY(0.667)S(0.203)GS(0.203)K 46.678000000000004 0.062164 80373000.0 45738.0 47508.0 36217.0 30113.0 45520.0 41728.0 46537.0 47187.0 51759.0 48923.0 True False 43200.82196355746 45225.6443690382 38551.60576924887 32974.93046619642 49102.16502662882 41467.56007378431 51241.414117352004 47023.319310528605 42360.87033821001 48489.580281518036 0.8909300041935729 0.9326878910163737 0.7950492775030874 0.680041573359729 1.0126333274397155 0.8551849661934444 1.0567510343429976 0.9697613185662426 0.8736076924624566 1.0 15.565387145587401 -5.795316800781331 24.999998241178794 0.9592756283092497 0.8302755753586664 0.3885995108550663 0.08382677665010065 213.49019966496306 157544.96696544037 0.02696590427790643 0.03057806449913672 1.6020763125445824e-06 5.795316800781331 -0.12900005295058337 AFVDFLS(ph)DEIKEER ddPTM_KYSE-520_SHP099_60min_R1 8 AFVDFLSDEIKEER 14 1 Q07021 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial 1 AFVDFLS(1)DEIKEER;AFVDFLS(1)DEIKEER;AFVDFLS(1)DEIKEER;AFVDFLS(1)DEIKEER;AFVDFLS(1)DEIKEER;AFVDFLS(1)DEIKEER;AFVDFLS(1)DEIKEER;AFVDFLS(1)DEIKEER 252.76 3.2265999999999996e-19 757425000.0 997606.0 1033669.0 871095.0 985109.0 1012883.0 1030488.0 1029816.0 976209.0 1248169.0 976298.0 True False 942266.8065017429 984009.9896711983 927247.1775012793 1078733.4631761792 1092591.1295840722 1024056.342151885 1133919.8513156192 972822.7588278943 1021532.9733799569 967648.7592683494 0.9737694566096503 1.0169082327095835 0.9582476788399767 1.1147985804186038 1.1291195478927634 1.0582934482613156 1.171830005934167 1.0053469810300353 1.0556857161190907 1.0 19.88412394216546 -5.259767343671992 24.99972620959512 1.0820755349539615 0.9863684312788429 0.4002111844925511 0.05206502690204763 146.7488237012359 2194123.485203387 0.014233690280836375 0.023058157706123808 5.498353478140921e-06 5.259767343671992 -0.09570710367511859 AFVDFLSDEIKEER ddPTM_KYSE-520_SHP099_60min_R1 6 AFVDFLSDEIKEER 14 1 Q07021 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial 0 ;;;;; 259.68 1.3913e-24 3424402000.0 3710510.0 3287290.0 2300940.0 2680250.0 3913100.0 3413600.0 2985870.0 3016990.0 3161060.0 2944730.0 False True 3504680.6135816965 3129363.6540771173 2449262.274034171 2934980.1541534513 4221038.707506623 3392294.4561893735 3287710.878882991 3006524.765860757 2587091.1878379057 2918641.983165271 1.2007915440799855 1.0721985334711448 0.8391787304374834 1.0055978674611066 1.4462338073164085 1.162285225716662 1.1264522671319435 1.0301108471687839 0.886402375748807 1.0 21.47686582203155 -7.492504430727384 3.735157249826674 0.9438730567114966 1.117835636787698 0.1926350173137471 0.14696260545907125 0.4268021870577411 12.57905085734692 0.11056733315084334 0.04310834075699301 3.2173297089224345e-08 7.492504430727384 0.17396258007620147 AFVDRT(ph)PPPAAVAQR ddPTM_KYSE-520_SHP099_60min_R1 2 AFVDRTPPPAAVAQR 15 1 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 AFVDRT(1)PPPAAVAQR;AFVDRT(1)PPPAAVAQR 90.259 0.0055917 941810000.0 480050.0 542890.0 486450.0 346700.0 443740.0 520750.0 428400.0 492720.0 603380.0 515020.0 True False 453420.6695440496 516808.7495054962 517807.34534751927 379650.2637608437 478659.8134647688 517499.8060875954 471706.8527810902 491010.86932171305 493821.40197200753 510457.3234794968 0.8882636190883484 1.0124426190669678 1.0143988959114574 0.7437453559740982 0.9377077993553261 1.0137964180043377 0.924086757274307 0.9619038590234569 0.9674097701369202 1.0 18.961430824808936 -6.007780805519213 24.961927218195516 0.9688380751129332 0.9178029051860428 0.1224301632080923 0.07382491635140193 980.350854278566 3145116.78182041 0.024553300689487096 0.026686772828284393 9.822435699606417e-07 6.007780805519213 -0.05103516992689039 AFVEDS(ph)EDEDGAGEGGSSLLQK ddPTM_KYSE-520_SHP099_60min_R1 4 AFVEDSEDEDGAGEGGSSLLQK 22 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1 A0A494C108 KRI1 Protein KRI1 homolog 1 AFVEDS(1)EDEDGAGEGGSSLLQK;AFVEDS(1)EDEDGAGEGGSSLLQK;AFVEDS(1)EDEDGAGEGGSSLLQK;AFVEDS(1)EDEDGAGEGGSSLLQK 189.99 8.345e-14 798130000.0 458551.0 456342.0 360464.0 320894.0 365169.0 390936.0 364997.0 392214.0 489305.0 396274.0 True False 433114.2619312445 434418.64533669275 383700.08620279183 351391.6692797007 393905.7227726058 388496.02341365383 401894.4587874406 390853.5011774361 400459.54637527466 392763.3206565069 1.1027360223131089 1.1060570641132135 0.9769244377541013 0.8946651858741463 1.0029086272979597 0.9891351941018314 1.0232484492586296 0.9951374800582738 1.0195950724367628 1.0 18.583300680113368 -4.759237904360474 24.988838389975665 0.9860692179477777 1.104396592715625 0.6539303262656128 0.033940220179804394 34.29888287040373 389299.5391629733 0.009455488633331953 0.022640795105116036 1.7408529815286736e-05 4.759237904360474 0.11832737476784727 AFVHWYVGEGMEEGEFSEAR ddPTM_KYSE-520_SHP099_60min_R1 19 AFVHWYVGEGMEEGEFSEAR 20 0 Q9BQE3;F5H5D3;Q9NY65;C9J2C0;Q9NY65-2;P68363;P68366-2;P68366;P68363-2;Q71U36-2;Q71U36;P0DPH8;P0DPH7 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA8;TUBA1B;TUBA4A;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain 0 ;;;;;;;;;;;;;;;;;; 278.34 7.9289e-36 16280993000.0 11709282.5 10367993.8 6879943.8 10563878.7 6867862.2 5944437.4 7208926.1 8361112.7 6599486.5 5443858.4 False True 11059745.25784903 9869899.81517203 7323435.985647282 11567866.555502048 7408323.88234944 5907335.9612095095 7937674.7025267575 8332109.951542076 5401186.11111627 5395630.049833749 2.049759741809912 1.8292395371836403 1.357290236359502 2.143932487709842 1.373022948928403 1.0948371008852853 1.4711302719450408 1.5442329949583562 1.0010297335494103 1.0 22.363360002938897 -1.0000000000000002 0.1499932042198271 0.8845062600605342 5.027347869181751 0.54892236294673 0.2623506776208129 55.982432174072706 0.5516383885374295 0.9522211660336147 50.472255392553556 0.09999999999999995 1.0000000000000002 4.142841609121217 AFVVLAS(ph)QFLS(ph)HDPEQLTK ddPTM_KYSE-520_SHP099_60min_R1 1 AFVVLASQFLSHDPEQLTK 19 0 F5GWL3;Q08AH3 F5GWL3 ACSM2A Acyl-coenzyme A synthetase ACSM2A, mitochondrial 2 AFVVLAS(1)QFLS(1)HDPEQLTK 50.387 0.047867 1207000000.0 542150.0 620150.0 438890.0 724040.0 618310.0 549650.0 578290.0 788070.0 940760.0 463380.0 True False 512075.85875076876 590357.0631358727 467181.55164882826 792852.5439094357 666967.4792973399 546219.430467685 636749.1967665185 785336.3691069213 769941.698629696 459274.813704185 1.114966123704298 1.2854113605195792 1.017215701163478 1.7263140068902305 1.452218713928711 1.1893084797362745 1.3864230690791663 1.7099486966702027 1.6764291784691876 1.0 18.808998143821107 -5.246676780535024 24.981773178610684 1.4649927348401621 1.1538190938527557 0.2806576043683072 0.22561929525263946 1072.913186981192 1815618.0106994791 0.06172017283942531 0.10632251081981942 5.666608640060396e-06 5.246676780535024 -0.3111736409874064 AFWMAIGGDRDEIEGLS(ph)S(ph)DEEH ddPTM_KYSE-520_SHP099_60min_R1 31 AFWMAIGGDRDEIEGLSSDEEH 22 1 Q6PD74-2;Q6PD74 Q6PD74-2 AAGAB Alpha- and gamma-adaptin-binding protein p34 2 AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH;AFWMAIGGDRDEIEGLS(1)S(1)DEEH 142.22 6.6317e-07 11203267000.0 4783194.0 4925612.0 4739474.0 4440600.0 4529198.0 4449556.0 3818426.0 4481822.0 5752791.0 4338386.0 True False 4517860.693759161 4688978.206025661 5044988.077466519 4862633.288884933 4885620.114988516 4421784.670525007 4204429.764326533 4466275.605547115 4708229.170459655 4299951.275253234 1.05067718319508 1.0904724044226561 1.1732663359468898 1.1308577650332936 1.1362035991211994 1.0283336687959557 0.9777854434127103 1.0386805151144616 1.0949494236262889 1.0 22.035888881383375 -6.268870095425557 23.89358481171086 1.0272320588175292 1.11883490991573 0.5374462964242401 0.040943111753138146 263.4145486043618 847010.5764574481 0.015192700955966768 0.01367672427104237 5.384308118838067e-07 6.268870095425557 0.09160285109820077 AFWMAIGGDRDEIEGLSS(ph)DEEH ddPTM_KYSE-520_SHP099_60min_R1 4 AFWMAIGGDRDEIEGLSSDEEH 22 1 Q6PD74-2;Q6PD74 Q6PD74-2 AAGAB Alpha- and gamma-adaptin-binding protein p34 1 AFWMAIGGDRDEIEGLS(0.164)S(0.836)DEEH;AFWMAIGGDRDEIEGLS(0.105)S(0.895)DEEH;AFWMAIGGDRDEIEGLS(0.021)S(0.979)DEEH;AFWMAIGGDRDEIEGLS(0.002)S(0.998)DEEH 197.12 4.9372e-14 200260000.0 202354.0 214008.0 184472.0 178519.0 173092.0 204054.0 163568.0 175392.0 261101.0 168226.0 True False 191129.0202373017 203726.73444744284 196363.36028563578 195485.39208630548 186713.35564124014 202780.423296012 180103.04970984464 174783.60608880053 213691.6402205792 166735.6485178474 1.1462996781809573 1.221854691893533 1.1776927251679896 1.1724270953693547 1.1198166516937398 1.2161791740313193 1.0801712249949138 1.0482677678258567 1.2816193904550988 1.0 17.347203063713714 -13.999999999997366 0.19226032190863512 0.3274148200940841 1.1869614824898875 0.3260565420788193 0.06702581067002725 159.28190246051506 1.5622944122794782 41.26409974344915 0.17337369750030945 1.0000000000060657e-14 13.999999999997366 0.8595466623958035 AGAAAGDS(ph)DEESR ddPTM_KYSE-520_SHP099_60min_R1 2 AGAAAGDSDEESR 13 0 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(1)DEESR;AGAAAGDS(1)DEESR 188.19 2.8578e-08 1499780000.0 1810920.0 1565190.0 1406240.0 1553750.0 1639030.0 1583130.0 1670260.0 1749000.0 1823090.0 1670910.0 True False 1710464.6576204796 1489995.923001914 1496888.4804635537 1701417.932848029 1768012.3361949802 1573249.0984377444 1839106.180966723 1742933.1272196693 1492062.8123589556 1656107.037348307 1.0328225284032413 0.8996978392094973 0.9038597425805956 1.0273598834362012 1.0675712960110668 0.9499682465915782 1.1104995869780416 1.0524278249613532 0.9009458801334409 1.0 20.659364489299808 -5.2757898060995405 24.471084081643937 1.0211160511870119 0.94088381759639 0.1904882306918999 0.06529585135241961 833.0896949891187 1420625.147938713 0.01823600768933896 0.027197221849289407 5.299198573989587e-06 5.2757898060995405 -0.08023223359062193 AGAAAGDS(ph)DEESRADDK ddPTM_KYSE-520_SHP099_60min_R1 4 AGAAAGDSDEESRADDK 17 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(1)DEESRADDK;AGAAAGDS(1)DEESRADDK;AGAAAGDS(0.957)DEES(0.043)RADDK;AGAAAGDS(0.986)DEES(0.014)RADDK 235.24 2.4906e-21 2507880000.0 5334730.0 4732630.0 4430920.0 4483260.0 4876590.0 4451990.0 4931380.0 4980290.0 5771600.0 4922900.0 True False 5038801.892379404 4505267.350977549 4716544.192922669 4909347.682458735 5260349.888998414 4424203.479028158 5429892.0160308415 4963014.536398429 4723622.930195962 4879286.935958244 1.0326922680536788 0.9233454416824042 0.966646203600729 1.006160889264158 1.0780980823718114 0.9067315648980763 1.1128453987845797 1.0171598025570394 0.9680969765038606 1.0 22.218238895570668 -5.32358428400693 5.122365819762692 1.016360979198638 0.9691353597769297 0.08126954985399193 0.05824514820485053 0.46082320347501565 24.761956300323558 0.016043457830898517 0.02444476294169606 4.746961571972251e-06 5.32358428400693 -0.04722561942170844 AGAAAGDS(ph)DEESRADDKGVMDYYLK ddPTM_KYSE-520_SHP099_60min_R1 10 AGAAAGDSDEESRADDKGVMDYYLK 25 2 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(0.523)DEES(0.476)RADDKGVMDY(0.001)Y(0.001)LK;AGAAAGDS(0.721)DEES(0.278)RADDKGVMDYYLK;AGAAAGDS(1)DEESRADDKGVMDYYLK;AGAAAGDS(0.808)DEES(0.186)RADDKGVMDY(0.005)Y(0.001)LK;AGAAAGDS(1)DEESRADDKGVMDYYLK;AGAAAGDS(0.634)DEES(0.352)RADDKGVMDY(0.012)Y(0.003)LK;AGAAAGDS(1)DEESRADDKGVMDYYLK;AGAAAGDS(1)DEESRADDKGVMDYYLK;AGAAAGDS(0.818)DEES(0.182)RADDKGVMDYYLK;AGAAAGDS(0.999)DEES(0.001)RADDKGVMDYYLK 249.97 3.1661999999999996e-29 18940980000.0 8221610.0 8079190.0 7771600.0 6673520.0 7463940.0 6649150.0 6686100.0 6559850.0 10217590.0 6681230.0 True False 7765540.903926802 7691053.585288567 8272569.770999646 7307769.334333044 8051309.613990698 6607650.188473044 7361996.238047735 6537095.4114304995 8362333.220483222 6622039.500118291 1.172681151145064 1.1614327557471047 1.2492480256047809 1.1035526644325366 1.2158353349971525 0.9978270574126008 1.1117415167813822 0.9871725185743344 1.2628032829362983 1.0 22.658844185685002 -6.247946700668103 24.970122403319827 1.0735966947325764 1.179026847839942 0.3017718899407279 0.08259108191727904 991.1078299467479 1834187.997900923 0.025605645403317 0.025473327449804527 5.650063116617038e-07 6.247946700668103 0.10543015310736559 AGAAAGDSDEES(ph)RADDKGVMDYYLK ddPTM_KYSE-520_SHP099_60min_R1 2 AGAAAGDSDEESRADDKGVMDYYLK 25 2 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 AGAAAGDS(0.27)DEES(0.73)RADDKGVMDYYLK;AGAAAGDS(0.052)DEES(0.73)RADDKGVMDY(0.172)Y(0.046)LK 131.2 3.731e-05 2354540000.0 959110.0 988850.0 838560.0 843580.0 891640.0 817980.0 812080.0 786420.0 1140010.0 772640.0 True False 905906.2563616153 941344.1617058907 892614.9193434386 923753.5895684256 961806.9952623761 812874.6834057258 894172.971537039 783692.0925718077 933012.9213134479 765795.0107048232 1.1829618157577657 1.2292377836720239 1.165605556142097 1.2062674431872054 1.2559588164163504 1.0614781658835455 1.1676401113061043 1.0233705908458615 1.218358579347129 1.0 19.54659873523228 -6.264871554041445 24.984353068253807 1.100222064244159 1.2067336131108837 0.43909793248117934 0.06414010181308208 290.3198530126792 2113358.540701416 0.02049166225814954 0.018827511429623685 5.434110257499639e-07 6.264871554041445 0.10651154886672476 AGAAS(ph)PLNS(ph)PLSSAVPSLGK ddPTM_KYSE-520_SHP099_60min_R1 8 AGAASPLNSPLSSAVPSLGK 20 0 E7EPJ7;O75962-4;O75962;O75962-5 E7EPJ7 TRIO Triple functional domain protein 2 AGAAS(1)PLNS(0.993)PLS(0.006)S(0.001)AVPSLGK;AGAAS(1)PLNS(0.999)PLS(0.001)SAVPSLGK;AGAAS(1)PLNS(0.996)PLS(0.003)S(0.001)AVPSLGK;AGAAS(1)PLNS(1)PLSSAVPSLGK;AGAAS(1)PLNS(1)PLSSAVPSLGK;AGAAS(1)PLNS(0.999)PLSSAVPSLGK;AGAAS(1)PLNS(0.935)PLS(0.061)S(0.004)AVPSLGK;AGAAS(1)PLNS(0.999)PLS(0.001)SAVPSLGK 261.94 1.0385e-30 9789000000.0 4267640.0 3663570.0 3687000.0 4407880.0 4790010.0 5802150.0 6368150.0 6979690.0 7172500.0 6799920.0 True False 4030905.5018705777 3487566.598069318 3924669.91940858 4826803.589922558 5166956.535571228 5765936.629651735 7011904.749154762 6955479.084461898 5870154.804011107 6739677.999057712 0.5980857694439032 0.5174678372701073 0.5823230605315708 0.7161771809569245 0.7666473882422321 0.8555210843096483 1.0403916552296877 1.032019494912718 0.8709844602118715 1.0 22.68424823487674 -5.931957094042567 1.0161874179208237 0.991129828223331 0.5494813417220599 0.9042949340614898 0.05669158832870908 0.14864765104360728 0.3307449671739933 0.02858374705287789 0.03643838105161277 1.169614936973006e-06 5.931957094042567 -0.4416484865012711 AGAAS(ph)PLNSPLSSAVPSLGK ddPTM_KYSE-520_SHP099_60min_R1 4 AGAASPLNSPLSSAVPSLGK 20 0 E7EPJ7;O75962-4;O75962;O75962-5 E7EPJ7 TRIO Triple functional domain protein 1 AGAAS(1)PLNSPLSSAVPSLGK;AGAAS(1)PLNSPLSSAVPSLGK;AGAAS(0.994)PLNS(0.004)PLS(0.002)SAVPSLGK;AGAAS(1)PLNSPLSSAVPSLGK 297.4 3.9128e-44 3258003000.0 2329930.0 2983720.0 2171770.0 2080720.0 2164410.0 2714070.0 2208410.0 2805110.0 2869150.0 2733450.0 True False 2200684.138299695 2840377.612544975 2311765.7691548606 2278471.003208723 2334736.753191689 2697130.482396851 2431657.6348045915 2795379.728127596 2348184.685385637 2709233.75959192 0.8122902390789545 1.0484062523171898 0.8532913636448528 0.8410019973883387 0.8617701388540797 0.9955325829112317 0.897544416828344 1.0317971707796274 0.8667338789323716 1.0 21.369453447638733 -6.255047271685674 24.832722037474433 0.95651035865757 0.8884988660104296 0.19829391119473072 0.07497136858211895 883.2637859913631 3431397.127330717 0.024430974393087505 0.023873038366880824 5.558437520089029e-07 6.255047271685674 -0.06801149264714035 AGAAS(ph)PLNSPLSSAVPSLGKEPFPPS(ph)SPLQK ddPTM_KYSE-520_SHP099_60min_R1 1 AGAASPLNSPLSSAVPSLGKEPFPPSSPLQK 31 1 E7EPJ7;O75962-4;O75962;O75962-5 E7EPJ7 TRIO Triple functional domain protein 2 AGAAS(0.998)PLNS(0.002)PLSSAVPSLGKEPFPPS(0.529)S(0.471)PLQK 104.86 0.00065898 246090000.0 209380.0 230270.0 223800.0 194000.0 200910.0 206230.0 161740.0 187470.0 302610.0 185180.0 True False 197765.27401131793 219207.48355768353 238226.5060926607 212437.7016717733 216720.4739784709 204942.8420728658 178090.25763028365 186819.710325827 247663.6521773168 183539.4492678598 1.0775082675697516 1.1943344301843761 1.297958052304003 1.1574498153894917 1.180784157536543 1.116614672705973 0.9703105154814782 1.0178722398429993 1.3493755874568052 1.0 17.48573065819364 -6.341629429720167 3.8612418604280823 1.0814474441846116 1.1879443062196466 0.14768579687063466 0.10975235945373567 0.4475840274873621 12.691614486783964 0.04055955000271049 0.03579401931877146 4.553764533096348e-07 6.341629429720167 0.10649686203503506 AGAASVTGRYPGMAQLERSAISGFS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 2 AGAASVTGRYPGMAQLERSAISGFSSK 27 2 H7C5E6 H7C5E6 SLC26A8 1 AGAAS(0.001)VT(0.001)GRYPGMAQLERS(0.025)AIS(0.093)GFS(0.44)S(0.44)K;AGAAS(0.001)VT(0.001)GRYPGMAQLERS(0.014)AIS(0.143)GFS(0.421)S(0.421)K 47.537 0.06386599999999999 16428000000.0 4669700.0 4530000.0 4420170.0 4082900.0 4399800.0 4164500.0 4497330.0 4294600.0 5614000.0 4291600.0 True False 4410662.432183839 4312372.000331377 4705101.230722056 4470937.588431349 4746039.228562421 4138507.8107571574 4951964.006111062 4279703.034967171 4594639.11742327 4253579.762814278 1.0369295224560764 1.0138218255670373 1.1061509347620744 1.0510999764286215 1.1157752982683742 0.9729470332111544 1.1641874097206808 1.006141479320846 1.0801817230725534 1.0 22.020246076987682 -4.725151710995796 24.998200485642386 1.0642715827230111 1.0253756327993597 0.06397208963078449 0.05561781987342837 458.4221096123629 315796.07509937976 0.012937212307579564 0.034225901449663816 1.8829911940223042e-05 4.725151710995796 -0.03889594992365142 AGAEDDEEKGEGT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 AGAEDDEEKGEGTPR 15 1 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 AGAEDDEEKGEGT(1)PR;AGAEDDEEKGEGT(1)PR 94.387 0.0037521 1018800000.0 2122870.0 1466270.0 1493430.0 1702710.0 1934800.0 1696240.0 1908450.0 2060340.0 1838750.0 1921980.0 True False 2005110.1692635713 1395828.1882838607 1589698.8873724877 1864535.0464615717 2087057.7524938823 1685653.1369717186 2101374.750677103 2053193.1614269717 1504879.3511154319 1904952.7524778112 1.0525773758196801 0.7327363822899431 0.8345083022687747 0.9787828301968816 1.0955955468077638 0.8848792363900653 1.1031112178209155 1.0778184176779928 0.7899825069981418 1.0 20.8613237850946 -5.3222874159533395 5.820778437787939 0.9989004507589465 0.8594145974059979 0.16776956746901928 0.11717120657956522 0.31874571622712256 22.43899663774036 0.032282956862233016 0.04870453653989223 4.7611578923653986e-06 5.3222874159533395 -0.1394858533529486 AGAES(ph)PTMSVDGR ddPTM_KYSE-520_SHP099_60min_R1 1 AGAESPTMSVDGR 13 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 AGAES(0.954)PT(0.042)MS(0.004)VDGR 76.72800000000001 0.014861000000000001 523970000.0 963790.0 918150.0 886440.0 819490.0 794970.0 864520.0 772780.0 868670.0 1050300.0 954960.0 True False 910326.6474322677 874040.6958287539 943581.3407541467 897374.0832113475 857529.6162394361 859124.210002588 850900.1440060016 865656.7865191024 859591.9959083829 946499.7973476384 0.9617821894767034 0.9234452012330742 0.9969165798009993 0.9480974911204892 0.9060008450529814 0.9076855720519944 0.8989966467932332 0.9145873976359201 0.9081797992109498 1.0 19.85224267147452 -5.637010605026393 5.370136376722657 0.9165456838950645 0.9593077915641092 0.2151632257783509 0.0320347495466117 0.26646762268201685 11.487294192049339 0.009035597086844524 0.01172060415979358 2.3066908610042975e-06 5.637010605026393 0.04276210766904465 AGAGPGGPPQKPAPS(ph)SQR ddPTM_KYSE-520_SHP099_60min_R1 1 AGAGPGGPPQKPAPSSQR 18 1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 AGAGPGGPPQKPAPS(0.579)S(0.421)QR 99.508 0.00049771 485410000.0 115500.0 100790.0 107160.0 93441.0 68448.0 70197.0 115880.0 103390.0 132410.0 94063.0 True False 109092.98475645829 95947.89711112567 114067.70506206216 102321.60454593887 73834.46818415397 69758.874484745 127594.28127981495 103031.36422140735 108367.68178447004 93229.6749999067 1.170153009292025 1.0291561899279569 1.2235128467644698 1.097521841045153 0.7919631617747017 0.7482475347555895 1.3686015882812275 1.1051348642104615 1.1623732656429242 1.0 16.508501617271882 -9.643174779500097 14.302574003225736 0.9999999987317787 1.0721803215247967 0.01604961694617313 0.1776327370321397 0.0 0.0 0.18236877383960792 0.04423092455029897 2.2741820141485772e-10 9.643174779500097 0.072180322793018 AGAGPGGPPQKPAPSS(ph)QR ddPTM_KYSE-520_SHP099_60min_R1 3 AGAGPGGPPQKPAPSSQR 18 1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 1 AGAGPGGPPQKPAPS(0.016)S(0.984)QR;AGAGPGGPPQKPAPS(0.152)S(0.848)QR;AGAGPGGPPQKPAPS(0.014)S(0.986)QR 128.75 2.0248e-05 1002730000.0 267710.0 341297.0 307170.0 272253.0 276692.0 233580.0 271544.0 316179.0 376020.0 322351.0 True False 252859.59263334554 324900.579822759 326970.6696893767 298127.8432641505 298466.0862378736 232122.14057789813 298994.31753405306 315082.24884573324 307744.24669282074 319495.220925283 0.7914346634076231 1.0169184342783648 1.0233976857069857 0.9331214482668915 0.9341801275571279 0.7265277393059414 0.9358334583789463 0.9861876742106832 0.9632201877748577 1.0 18.285434825643634 -7.13642005469864 5.34281084485563 0.9800747824607591 0.9111686243290151 0.13870051915919002 0.08610968501562663 0.5633401145662911 22.062464136620942 0.04431139315908042 0.025178492272508523 7.304322590963156e-08 7.13642005469864 -0.06890615813174394 AGAHLQGGAK ddPTM_KYSE-520_SHP099_60min_R1 6 AGAHLQGGAK 10 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;;;; 138.06 0.00073601 12020090000.0 16108700.0 15944970.0 9887560.0 9602310.0 14769710.0 16489000.0 11134860.0 15000260.0 13010470.0 14625510.0 False True 15215118.299102679 15178949.707312098 10524927.938255362 10514910.655360235 15932002.148845574 16386086.034715999 12260480.314561276 14948227.599146988 10648096.615258621 14495939.359874602 1.0496124412067283 1.0471173568322243 0.7260604281629948 0.725369387544899 1.099066556041622 1.130391458457215 0.8457872242828791 1.0312010300294399 0.734557199151441 1.0 23.789145489568202 -11.505805971774667 2.141545264460405 1.7939329700492406 0.9344848041823312 0.017075620750469533 0.15354782984875137 8701582.802757915 1067254.1541559207 33448317.19828558 0.03999886847996576 3.1202833107870564e-12 11.505805971774667 -0.8594481658669094 AGAPGALS(ph)PSYDGGLHGLQSK ddPTM_KYSE-520_SHP099_60min_R1 2 AGAPGALSPSYDGGLHGLQSK 21 0 K7ENH8;A0A0A0MRB7;P15923-2;X6REB3;P15923;P15923-3 K7ENH8 TCF3 Transcription factor E2-alpha 1 AGAPGALS(0.987)PS(0.013)YDGGLHGLQSK;AGAPGALS(0.819)PS(0.181)YDGGLHGLQSK 251.51 3.764e-27 3802700000.0 2324870.0 3054700.0 2151350.0 2721800.0 2092650.0 2913900.0 2231580.0 2847800.0 3259500.0 2883500.0 True False 2195904.8265865543 2907947.626801818 2290029.4632817064 2980479.053660991 2257329.649450238 2895713.269243675 2457169.884522 2837921.6464815177 2667656.9653083608 2857954.4333290565 0.7683484386518643 1.0174926488994185 0.8012827064615551 1.0428714394124239 0.7898410216501641 1.0132118397250425 0.8597652418341019 0.9929905156590605 0.9334147998297405 1.0 21.446551483891472 -1.0000000000884837 0.11001970712309748 1.0265351150491915 0.5394281878718377 0.14610008063296798 0.09370188847988553 233.5059024020489 1.7972669869638263 0.7933111961605672 17.270201169365286 0.09999999997962589 1.0000000000884837 -0.4871069271773538 AGAPHALAPHPDRFS(ph)HDR ddPTM_KYSE-520_SHP099_60min_R1 4 AGAPHALAPHPDRFSHDR 18 1 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 AGAPHALAPHPDRFS(1)HDR;AGAPHALAPHPDRFS(1)HDR;AGAPHALAPHPDRFS(1)HDR;AGAPHALAPHPDRFS(1)HDR 202.43 3.4436e-13 7734900000.0 1441040.0 1294230.0 1260650.0 1304800.0 1279770.0 1222130.0 1222970.0 1305540.0 1504100.0 920960.0 True False 1361102.638557981 1232053.2481211657 1341913.5161113185 1428807.799697575 1380480.6181047636 1214502.2333438948 1346599.742636998 1301011.3864553256 1230993.355275442 912801.0108960387 1.4911274443286089 1.3497500916566003 1.4701052037552493 1.5653004133891188 1.51235658333642 1.3305224455784674 1.4752391009242272 1.4252957335993806 1.3485889482824454 1.0 19.799940863799925 -8.67370507520632 0.8029176864264016 0.9935932501645683 1.4607239575235242 0.8090417925320744 0.06618057548718405 1.1120916448825897 0.9803405315677147 0.08256069542620478 0.0237815508497732 2.1198001804766525e-09 8.67370507520632 0.4671307073589559 AGAPVGGS(ph)PGLAK ddPTM_KYSE-520_SHP099_60min_R1 4 AGAPVGGSPGLAK 13 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 AGAPVGGS(1)PGLAK;AGAPVGGS(1)PGLAK;AGAPVGGS(1)PGLAK;AGAPVGGS(1)PGLAK 181.76 1.0161e-07 4794620000.0 4378130.0 4939040.0 3870920.0 3000230.0 3331520.0 4479290.0 3352980.0 4364110.0 4978210.0 4648250.0 True False 4135266.4013142246 4701761.104749818 4120445.6968909884 3285370.957147961 3593691.6702441685 4451333.089601737 3691931.940331322 4348971.921000929 4074292.554461651 4607070.121283783 0.8975913742250383 1.0205534061720878 0.8943744263529477 0.7131150320395984 0.7800384139242857 0.9661960795945844 0.8013622200528928 0.9439778007522635 0.8843565318529012 1.0 22.135418125776933 -10.324624505611522 9.879061262099611 1.0000000261320234 0.8771856833469052 0.150220298724149 0.08706754611963598 5.332340562530932e-08 3.6565405481806767e-09 0.0897846518996195 0.021775972124328875 4.7356052612405435e-11 10.324624505611522 -0.12281434278511827 AGASCVCCSQPQQSSTS(ph)PPPSDALQWVVVEVSGTPNQLETHR ddPTM_KYSE-520_SHP099_60min_R1 1 AGASCVCCSQPQQSSTSPPPSDALQWVVVEVSGTPNQLETHR 42 0 Q13952-3;Q13952 Q13952-3 NFYC Nuclear transcription factor Y subunit gamma 1 AGASCVCCSQPQQS(0.002)S(0.035)T(0.163)S(0.793)PPPS(0.007)DALQWVVVEVS(0.001)GT(0.001)PNQLETHR 90.3 0.00074649 34509000.0 16563.0 20405.0 14687.0 11964.0 12316.0 15354.0 10830.0 17138.0 17892.0 17949.0 True False 15644.21737247807 19424.71317147057 15633.747520030875 13101.054962892234 13285.199131545716 15258.169990722889 11924.802090614401 17078.55227803928 14643.263820615806 17789.985824110703 0.8793833523619518 1.091890311972274 0.8787948273034886 0.7364286342002826 0.7467796356273839 0.8576830887657901 0.6703098141007375 0.960009324734412 0.8231183523918183 1.0 14.118777740548376 -4.989180514393757 21.71603833199053 0.8166535231000139 0.9855637312259591 0.2553644121884463 0.10545450420476724 51.380623558987786 103117.68538272785 0.026279670751688758 0.05455066606446284 1.0252257028684416e-05 4.989180514393757 0.16891020812594515 AGAVTSTPNRNS(ph)SKR ddPTM_KYSE-520_SHP099_60min_R1 1 AGAVTSTPNRNSSKR 15 2 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 AGAVT(0.015)S(0.013)T(0.013)PNRNS(0.72)S(0.239)KR 82.01 0.0049788 407600000.0 107180.0 89045.0 86034.0 81665.0 79199.0 76038.0 69362.0 84893.0 99848.0 83064.0 True False 101234.51174196694 84767.14454073005 91579.8892992671 89426.41704652236 85431.51071933159 75563.4186371361 76373.78786788517 84598.52599717515 81718.12016324878 82328.11758281411 1.2296468656669433 1.0296256859688613 1.1123768159419727 1.0862196254708247 1.0376954220214711 0.9178324593797085 0.9276756242004506 1.0275775577168667 0.9925906550826729 1.0 16.329097619058867 -5.88697811542043 2.6738000533478816 0.9721923502378974 1.1109955424295759 0.5896856853265215 0.055417298230531056 0.20375533527628134 2.9547488986329427 0.01857277252404834 0.021670922543071795 1.2972446389299575e-06 5.88697811542043 0.13880319219167847 AGCFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 AGCFSPK 7 0 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 AGCFS(1)PK;AGCFS(1)PK 72.87899999999999 0.024543000000000002 906650000.0 2241100.0 2188600.0 1973050.0 1847230.0 1968250.0 1934050.0 1816140.0 1928750.0 2276860.0 2074460.0 True False 2116781.7154779104 2083456.3708444263 2100235.95999162 2022790.1838100492 2123140.0771894166 1921978.8765505806 1999733.1550183238 1922059.6164236346 1863439.6189697778 2056081.8983054585 1.0295220814027293 1.0133139018253743 1.0214748555116173 0.9838081768421545 1.032614546599153 0.9347773929309916 0.9725941153737236 0.9348166617330371 0.9063061255028563 1.0 20.971466300746012 -6.264459744633723 24.99952304579698 0.9470558520998139 1.0144887575233572 0.6121657221895704 0.02638638731688794 179.82147640149887 1488372.6870936155 0.008831128042795984 0.008133129388088267 5.43926546700393e-07 6.264459744633723 0.0674329054235433 AGDLLEDS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 19 AGDLLEDSPK 10 0 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK;AGDLLEDS(1)PK 213.84 4.7141000000000005e-09 648727307000.0 460087280.0 401478900.0 362261309.0 334759060.0 381006840.0 417502750.0 383158080.0 412344580.0 445550740.0 407409020.0 True False 434565321.4171457 382191251.0118856 385613252.6167282 366574460.413419 410989910.6756238 414896960.4724682 421891437.9889014 410914252.89392823 364649957.03613883 403799693.04222107 1.0761903213524926 0.946487225219173 0.9549617279585417 0.9078126277205718 1.0178063969767577 1.02748210962381 1.044803761019176 1.0176190323427592 0.9030466424797684 1.0 28.58906457307033 AGDLLEDS(ph)PKRPK ddPTM_KYSE-520_SHP099_60min_R1 17 AGDLLEDSPKRPK 13 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK;AGDLLEDS(1)PKRPK 207.52 5.2506e-11 135959470000.0 75674980.0 76484420.0 76690190.0 57536980.0 63161150.0 59369400.0 52072160.0 57079080.0 91350660.0 55829510.0 True False 71477138.00506744 72809993.6577451 81633762.35604255 63005277.28007617 68131573.16721569 58998853.5526393 57336122.108107775 56881085.99383736 74763682.906739 55334903.97610158 1.2917188405339508 1.3158059095790746 1.4752670826229157 1.1386172696222139 1.231258541564305 1.0662140767086201 1.0361655661835159 1.0279422553692974 1.3511125444263616 1.0 25.721686450426574 -5.35295354021699 6.985801378954964 1.1201836204603173 1.355776534281851 0.5032037730945593 0.10898470471589954 0.21251009957329461 13.918982009213549 0.03084977865850905 0.04593885873009794 4.436561026596431e-06 5.35295354021699 0.2355929138215338 AGDNIPEEQPVASTPT(ph)TVSDGENKKDK ddPTM_KYSE-520_SHP099_60min_R1 3 AGDNIPEEQPVASTPTTVSDGENKKDK 27 2 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 AGDNIPEEQPVAS(0.002)T(0.002)PT(0.332)T(0.332)VS(0.332)DGENKKDK;AGDNIPEEQPVASTPT(0.333)T(0.333)VS(0.333)DGENKKDK;AGDNIPEEQPVAST(0.001)PT(0.333)T(0.333)VS(0.333)DGENKKDK 138.84 1.8291999999999998e-06 3426190000.0 2191280.0 2664390.0 2227790.0 2428520.0 2157290.0 2077910.0 2119130.0 2433360.0 3743460.0 1931480.0 True False 2069725.3301916164 2536388.7050690767 2371396.90799003 2659325.8106388375 2327056.4496989483 2064940.9929284216 2333352.3411157634 2424919.242110491 3063742.0289471494 1914368.5898687032 1.0811529927648722 1.324921814164865 1.2387358006916902 1.3891399100009405 1.2155738774728586 1.078653820302205 1.2188626335933543 1.2666940185624356 1.6003929677707864 1.0 20.868437200391572 -7.534881387722861 24.999250559920448 1.3446454083452755 1.227632271037508 0.02299217780269558 0.1623987690242228 616.6214548733619 1284278.6392407443 0.10357758968557411 0.03920891299461438 2.9182239154929817e-08 7.534881387722861 -0.11701313730776741 AGDNIPEEQPVASTPTTVS(ph)DGENKKDK ddPTM_KYSE-520_SHP099_60min_R1 1 AGDNIPEEQPVASTPTTVSDGENKKDK 27 2 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 AGDNIPEEQPVAST(0.001)PT(0.124)T(0.124)VS(0.752)DGENKKDK 126.66 9.784299999999999e-05 870240000.0 386010.0 456240.0 323820.0 411290.0 378790.0 380920.0 345190.0 397340.0 589520.0 309300.0 True False 364597.25580814265 434321.54556979815 344693.95533031935 450378.8779411523 408598.61797971727 378542.53698490077 380085.1739297489 395961.7202798527 482478.02858984075 306559.84263175866 1.1893183812926824 1.4167594223732283 1.124393698702304 1.4691385345018912 1.332851082098604 1.2348079700693484 1.2398400608076683 1.291629447877438 1.573846151693769 1.0 18.225809200036252 AGDPGEMPQS(ph)PTGLGQPK ddPTM_KYSE-520_SHP099_60min_R1 5 AGDPGEMPQSPTGLGQPK 18 0 A0A0C4DGI9;J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9;H0YHL2 A0A0C4DGI9 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 AGDPGEMPQS(0.997)PT(0.003)GLGQPK;AGDPGEMPQS(0.996)PT(0.004)GLGQPK;AGDPGEMPQS(0.996)PT(0.004)GLGQPK;AGDPGEMPQS(1)PTGLGQPK;AGDPGEMPQS(0.996)PT(0.004)GLGQPK 295.37 1.2275999999999997e-35 2084880000.0 2014350.0 2467420.0 1719990.0 1434300.0 1630180.0 2382390.0 1812830.0 2929080.0 3105190.0 2770010.0 True False 1902609.9899928302 2348881.4395270706 1830863.307481302 1570615.440761982 1758465.8915445923 2367520.620307298 1996088.547915835 2918919.705132408 2541365.7714698166 2745469.8664351706 0.692999771461071 0.8555480678347249 0.6668670196910844 0.572075279340557 0.6404972471352802 0.8623371355306051 0.7270480628176179 1.0631767410080708 0.9256578637191997 1.0 21.388621646046847 -7.0528509232065515 1.5703247623573642 1.0023187480677134 0.6987915262486286 0.6320797732646266 0.09473007433689909 0.2714263324589535 1.2792331620474968 0.06797777882905785 0.03140195669420935 8.854194885393614e-08 7.0528509232065515 -0.30352722181908476 AGDRNS(ph)EDDGVVMTFSSVK ddPTM_KYSE-520_SHP099_60min_R1 11 AGDRNSEDDGVVMTFSSVK 19 1 Q9NY61 Q9NY61 AATF Protein AATF 1 AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(0.815)EDDGVVMT(0.178)FS(0.007)SVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(0.808)EDDGVVMT(0.175)FS(0.015)S(0.001)VK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK;AGDRNS(1)EDDGVVMTFSSVK 231.93 4.2544e-20 13571150000.0 13882400.0 12771910.0 10593900.0 11596040.0 11831980.0 11892210.0 12067440.0 12580790.0 13570430.0 12067240.0 True False 13112315.598121708 12158328.272572253 11276799.744839316 12698124.155123431 12763089.511242794 11817986.306198688 13287334.602064993 12537150.175868457 11106381.994701492 11960333.641770653 1.0963168746670942 1.0165542732110848 0.9428499306621229 1.0616864491786495 1.067118183615595 0.9880983808783705 1.110950162431914 1.0482274618229137 0.9286013523831147 1.0 23.511754299283858 -7.748387137784554 24.92810790852701 0.9643006739281018 1.039422093273713 0.27747879223912286 0.04972496658181865 260.9756886940905 498436.2880050288 0.034481391347950134 0.012854049247133532 1.7848957778053495e-08 7.748387137784554 0.07512141934561123 AGDRNSEDDGVVMT(ph)FSSVK ddPTM_KYSE-520_SHP099_60min_R1 1 AGDRNSEDDGVVMTFSSVK 19 1 Q9NY61 Q9NY61 AATF Protein AATF 1 AGDRNS(0.052)EDDGVVMT(0.838)FS(0.109)S(0.001)VK 265.63 1.1121999999999998e-34 1690400000.0 1172200.0 1125500.0 838160.0 928730.0 985980.0 946280.0 1009900.0 1075500.0 1037000.0 925040.0 True False 1107175.7292772336 1071429.290590058 892189.1347034167 1016996.2199671431 1063571.0165412028 940373.915515256 1111990.5476741912 1071769.3415235877 848706.9406426663 916844.86527023 1.207593314001825 1.1686047783822904 0.9731080671324409 1.1092347882292983 1.1600337819721844 1.0256630659518293 1.2128448222769335 1.1689756709361026 0.9256821658618541 1.0 19.80631811770174 -8.005320907443101 0.015278384336350542 6.363116118121752e-05 2.1394643874959405 0.18388307216809996 0.0899976140168115 1341.4238335569885 13.540149409239408 965.6197444542559 927.2203227892347 9.878229060791724e-09 8.005320907443101 2.1394007563347595 AGDSAVLVLPPS(ph)PGPR ddPTM_KYSE-520_SHP099_60min_R1 13 AGDSAVLVLPPSPGPR 16 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;A0A087WVI1 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR;AGDSAVLVLPPS(1)PGPR 305.9 5.3345000000000006e-40 34441610000.0 8234313.0 10091000.0 7174395.0 5925385.0 6517445.0 10328690.0 7289434.0 9829010.0 11348720.0 10472890.0 True False 7777539.243194001 9606213.2131002 7636867.981137872 6488531.808868033 7030330.842310566 10264224.81447697 8026321.126740129 9794915.458418189 9288078.525950078 10380108.342385117 0.7492734166787026 0.9254444073454543 0.7357214134224624 0.6250928790765505 0.6772887729508181 0.988836000156669 0.7732405926791954 0.9436236246612756 0.894795913451505 1.0 23.307318166116 -6.258657478641137 24.999790803578794 0.9073970385200887 0.745817853156327 0.47446184389010326 0.0929123592875398 265.26749446232 2383854.62122955 0.03329680204650528 0.0318806079594399 5.512422812919937e-07 6.258657478641137 -0.1615791853637617 AGDT(ph)SDQEGHSLEEK ddPTM_KYSE-520_SHP099_60min_R1 2 AGDTSDQEGHSLEEK 15 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 AGDT(0.5)S(0.5)DQEGHSLEEK;AGDT(0.5)S(0.5)DQEGHSLEEK 76.118 0.017978 1087830000.0 1767530.0 1680510.0 1443640.0 1550290.0 1695520.0 1510240.0 1520480.0 1796130.0 2175200.0 1692470.0 True False 1669481.5874162996 1599775.7771030625 1536699.3443056704 1697629.0954883161 1828947.7778108474 1500814.0319649184 1674184.9568547898 1789899.6442498956 1780238.5123297265 1677476.0325217359 0.9952342418309141 0.953680258965091 0.9160782714704799 1.012013920065543 1.0902974125128961 0.8946858273192476 0.9980380788737716 1.06701950403378 1.0612601776810537 1.0 20.677860722927544 -7.10358636220805 5.547244042501369 1.0469832162306036 0.9774175240131253 0.23182705861248898 0.053193454258899264 0.337139731851242 14.818089466589779 0.026355093722939902 0.015065460526973848 7.877957576986486e-08 7.10358636220805 -0.06956569221747833 AGEALRGS(ph)DSQLCPKPPPKPCK ddPTM_KYSE-520_SHP099_60min_R1 2 AGEALRGSDSQLCPKPPPKPCK 22 3 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 AGEALRGS(0.999)DS(0.001)QLCPKPPPKPCK;AGEALRGS(0.999)DS(0.001)QLCPKPPPKPCK 142.21 1.3036e-06 4394300000.0 1321730.0 1292920.0 1284040.0 1327580.0 1334620.0 1349020.0 1106440.0 1096070.0 1302970.0 1136460.0 True False 1248411.002096568 1230806.1824875157 1366811.2729366412 1453752.804048517 1439647.0010509533 1340600.2657864378 1218289.7530137955 1092267.98899466 1066383.4932007473 1126391.8485525006 1.1083274472386064 1.0926980553607482 1.213442084735519 1.290627951468843 1.2781049533526094 1.1901722011831064 1.081586087984737 0.9697051611287029 0.9467251512616426 1.0 20.103277367986387 -6.994920069828612 2.4987424555891544 0.9679850678304217 1.2003630249220054 0.7361799909745328 0.06013134658995069 0.1716378332891366 2.14041692969073 0.03756612751170643 0.0209372528282459 1.0117656485671358e-07 6.994920069828612 0.2323779570915837 AGEPNS(ph)PDAEEANS(ph)PDVTAGCDPAGVHPPR ddPTM_KYSE-520_SHP099_60min_R1 6 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 2 AGEPNS(0.999)PDAEEANS(0.639)PDVT(0.362)AGCDPAGVHPPR;AGEPNS(1)PDAEEANS(1)PDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANS(1)PDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANS(1)PDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANS(1)PDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANS(1)PDVTAGCDPAGVHPPR 174.55 1.5063999999999998e-10 5699470000.0 1353058.0 1435336.0 1243529.0 1275142.0 1512113.0 1245541.0 1164168.0 1373097.0 1659789.0 1339558.0 True False 1278001.175485749 1366380.3040767405 1323688.8690567485 1396331.1122945785 1631107.6903539295 1237767.1166090248 1281853.46262478 1368334.0469902474 1358413.1574757467 1327690.5582803553 0.9625745754651108 1.029140634882948 0.9969859774940406 1.051699210773275 1.2285300066203413 0.9322707831952947 0.9654760701808829 1.0306121697231425 1.0231398792465496 1.0 20.340487509642646 -9.614431796115417 13.953244913009618 0.9999107698612326 1.0263530228121964 0.008542412818137057 0.07683865580728573 0.0 0.0 0.07691367671984961 0.01865430665709118 2.4297869985604123e-10 9.614431796115417 0.026442252950963807 AGEPNS(ph)PDAEEANSPDVTAGCDPAGVHPPR ddPTM_KYSE-520_SHP099_60min_R1 7 AGEPNSPDAEEANSPDVTAGCDPAGVHPPR 30 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 AGEPNS(0.964)PDAEEANS(0.035)PDVT(0.001)AGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR;AGEPNS(0.993)PDAEEANS(0.007)PDVTAGCDPAGVHPPR;AGEPNS(1)PDAEEANSPDVTAGCDPAGVHPPR 223.47 8.6966e-23 9429920000.0 1340384.0 1289480.0 1111991.0 1147785.0 1140876.0 1354206.0 1118836.0 1234053.0 1539793.0 1320146.0 True False 1266030.2275307404 1227531.4452510593 1183671.7191085077 1256870.1413058576 1230656.4505035186 1345753.8980367887 1231938.861667096 1229772.3581731364 1260205.4062227502 1308450.533498045 0.9675797404018804 0.9381565552725523 0.9046362004561606 0.9605790277342078 0.9405448803734675 1.0285095718819541 0.9415249794530628 0.9398692015398026 0.9631280464639996 1.0 20.319427953071195 -6.099935810095865 21.91905764594157 0.9705302830330821 0.9409721213524684 0.2287498950030371 0.029132915738983977 26.29800526807692 5757.968378369873 0.009834421679089171 0.009834435919131709 7.944456472718049e-07 6.099935810095865 -0.029558161680613648 AGETRFT(ph)DTR ddPTM_KYSE-520_SHP099_60min_R1 1 AGETRFTDTR 10 1 P13639 P13639 EEF2 Elongation factor 2 1 AGET(0.003)RFT(0.994)DT(0.003)R 86.288 0.011559 61302000.0 276940.0 148310.0 128550.0 65446.0 66340.0 96467.0 60281.0 71690.0 171130.0 84437.0 True False 261577.5861337971 141184.96498215146 136836.5386872722 71665.96816294262 71560.58057703337 95864.9136703833 66374.79176586578 71441.32412257181 140057.10583623857 83688.95387099197 3.125592733982834 1.6870203109455835 1.6350609292859388 0.8563372446191285 0.8550779674859514 1.1454906440599173 0.7931129342133219 0.8536529711280643 1.6735435127094445 1.0 16.352749593158926 -3.7879393035130238 0.9973258249194389 1.0130131469298074 6.523165872764003 0.8379474585228599 0.2748070813715791 1.5994434904856651 0.6689715568640533 0.08759025401395071 11.802668239753496 0.00016295237570535052 3.7879393035130238 5.510152725834196 AGEVFIHK ddPTM_KYSE-520_SHP099_60min_R1 2 AGEVFIHK 8 0 Q15233-2;Q15233;H7C367;C9JYS8;C9IZL7 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 0 ; 91.318 0.0044818 416720000.0 1632160.0 1332730.0 1008640.0 921670.0 1468450.0 1361400.0 1013640.0 1243790.0 1182660.0 1117840.0 False True 1541620.8311697058 1268703.650331486 1073658.5482810608 1009265.2396898092 1584008.660662415 1352902.9976143125 1116108.623373074 1239475.5827927678 967918.7564324541 1107936.8072663595 1.3914338986294588 1.1451047045379696 0.9690611786155257 0.9109411593428283 1.4296922444256361 1.2211012295478876 1.0073757059546358 1.1187240776402738 0.8736227103246299 1.0 20.07944416691765 -7.3283391359111585 1.6304315695563278 0.9568313425484942 1.1593756009495872 0.21074003286928455 0.16210512908543334 0.7367790208818482 3.505664810762658 0.139984404475052 0.05171853173612647 4.6952731655734196e-08 7.3283391359111585 0.20254425840109302 AGFAGDDAPR ddPTM_KYSE-520_SHP099_60min_R1 6 AGFAGDDAPR 10 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;P63267-2;A5A3E0;P0CG38;P0CG39;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;F8WCH0;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;POTEE;ACTG2;POTEF;POTEI;POTEJ;ACTG1;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ;;;;; 157.91 0.0006678 9123620000.0 17495130.0 23613400.0 17873600.0 12247940.0 20644100.0 23873000.0 16197570.0 18413700.0 19789600.0 21224700.0 False True 16524640.26322301 22478976.81956399 19025760.854771156 13411980.535122575 22268673.221138597 23723999.75176031 17834978.4486494 18349827.17248991 16196307.495219007 21036665.67056673 0.7855161327369155 1.0685617755011079 0.9044095272850624 0.6375525829593723 1.0585647730426984 1.1277452483809514 0.847804434787546 0.8722783096830746 0.769908489722301 1.0 24.326402718568662 -11.316741413328828 2.3369913043587536 1.5285288056126547 0.9039394341153182 0.0419611756877194 0.14429229785619418 33253418.63184693 2718088.409074601 93803879.21965802 0.03890370766431424 4.8223484337698725e-12 11.316741413328828 -0.6245893714973365 AGFDS(ph)DYDQALADIR ddPTM_KYSE-520_SHP099_60min_R1 5 AGFDSDYDQALADIR 15 0 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1;P52701-4 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 AGFDS(0.93)DY(0.07)DQALADIR;AGFDS(1)DYDQALADIR;AGFDS(1)DYDQALADIR;AGFDS(1)DYDQALADIR;AGFDS(1)DYDQALADIR 231.77 1.1402999999999998e-15 686391000.0 915690.0 877020.0 839270.0 805600.0 881320.0 831390.0 792590.0 852500.0 1005960.0 870470.0 True False 864894.8503172407 834886.642766141 893370.6870794786 882163.981787528 950674.8699751425 826200.9866215391 872712.7321329691 849542.8764749947 823303.0221879431 862758.3130154129 1.0024764030315285 0.967694695224833 1.035481980993116 1.0224925897315214 1.1019017210653745 0.9576273843527479 1.0115378999742868 0.9846823422723925 0.9542684315731828 1.0 19.718596944098277 -9.338560568886345 6.964134622819081 0.999998978047082 1.0057620284003181 0.0 0.04160792387478428 0.0 0.0 0.0413015266986351 0.01001709159280826 4.5860568188973016e-10 9.338560568886345 0.005763050353236099 AGFNYES(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 6 AGFNYESPSK 10 0 Q9UHF7;Q9UHF7-3;Q9UHF7-2;H0YC29;E5RJ97;E7EVN4;F8W8T0 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 1 AGFNYES(0.964)PS(0.036)K;AGFNY(0.006)ES(0.792)PS(0.202)K;AGFNYES(0.98)PS(0.02)K;AGFNYES(0.993)PS(0.007)K;AGFNYES(0.996)PS(0.004)K;AGFNYES(0.83)PS(0.17)K 206.74 1.8824999999999998e-07 1433180000.0 3945050.0 3567310.0 3003760.0 2919950.0 3279850.0 3417070.0 3150300.0 3479090.0 3882300.0 3306280.0 True False 3726210.2122377953 3395931.0729585253 3197387.1757859276 3197461.1700850176 3537955.535206253 3395742.7986322413 3468763.0679651494 3467021.8488157075 3177372.184818729 3276988.9314469164 1.1370835514517683 1.0362961682202239 0.9757088725881532 0.9757314525542861 1.0796360955800086 1.036238714768222 1.0585214477467146 1.0579901004685066 0.9696011342387406 1.0 21.64393936928034 -7.629457321744752 0.006190716956246638 3.9547347960213614e-08 2.047125731353667 0.12145149008263556 0.047770476735704205 8072.192247789126 47.06833184233982 7802.159747173309 7757.511867151984 2.3471599074954e-08 7.629457321744752 2.0471256918063188 AGFQTEDFSLYACAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 AGFQTEDFSLYACASPK 17 0 H7C560;A0A2U3TZI2;A0A2R8Y8E0;P15056 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 AGFQTEDFSLYACAS(1)PK;AGFQTEDFSLYACAS(1)PK;AGFQTEDFSLYACAS(1)PK 207.07 1.0103999999999999e-13 628750000.0 607644.0 634319.0 516178.0 417298.0 429300.0 441716.0 365220.0 411713.0 520330.0 414888.0 True False 573936.7760117166 603845.3631077702 549451.6597940014 456957.8764547818 463083.4676171301 438959.0865977693 402140.0018037109 410284.86369753676 425851.1884518786 411212.41509797965 1.3957185020179037 1.4684511968440737 1.3361747836895523 1.1112453313110753 1.1261417472203292 1.0674752767208608 0.9779374042194054 0.9977443497171118 1.0355990549322567 1.0 18.64952429667751 -5.298006376186805 1.1721131793064712 1.0159482393675519 1.4616048473579188 0.9432137229549742 0.04083740417565058 0.11372617874233396 0.3000484392577983 0.01537905285539567 0.039395207338720734 5.034932165908935e-06 5.298006376186805 0.445656607990367 AGGAS(ph)PAASSTAQPPTQHR ddPTM_KYSE-520_SHP099_60min_R1 11 AGGASPAASSTAQPPTQHR 19 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(0.999)PAAS(0.001)STAQPPTQHR;AGGAS(0.998)PAASS(0.001)T(0.001)AQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(0.998)PAAS(0.002)STAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR;AGGAS(1)PAASSTAQPPTQHR 180.45 1.0652e-09 17571000000.0 1797290.0 1857334.0 1622074.0 1751541.0 1401787.0 1717511.0 1480901.0 1600771.0 1987109.0 1506221.0 True False 1697590.7408912107 1768104.8867248297 1726635.4854501653 1918006.9300199982 1512099.661822999 1706791.3767706433 1630604.9252809745 1595218.2990237612 1626300.0965414727 1492877.0537622042 1.1371269567129503 1.1843606827963649 1.156582506977963 1.2847721955310538 1.012876216438823 1.1432899798877294 1.0922566738980157 1.068553029871848 1.0893730950201348 1.0 20.50966392620239 -7.03227383344792 0.3964586413686286 1.0047345640080199 1.1909771406002494 0.4210025987161984 0.06068358926107114 1.1368828562303275 0.4612724593366271 0.07033976029012322 0.06998618267367013 9.28380835042488e-08 7.03227383344792 0.18624257659222954 AGGGDLLLPPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 AGGGDLLLPPSPK 13 0 Q5TH69 Q5TH69 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 1 AGGGDLLLPPS(1)PK;AGGGDLLLPPS(1)PK;AGGGDLLLPPS(1)PK;AGGGDLLLPPS(1)PK 158.81 1.1938e-06 1640100000.0 3880070.0 4321070.0 2931810.0 2336870.0 2806870.0 3904110.0 2834590.0 3541370.0 4240910.0 4003570.0 True False 3664834.7823722125 4113479.3111416954 3120799.163661856 2558965.422194415 3027754.700094324 3879743.0013339263 3121138.0201324737 3529085.8140319725 3470867.6486411677 3968101.4845303274 0.923573854312849 1.0366366201011048 0.7864716101209394 0.6448840666425897 0.7630235042873897 0.9777328065975965 0.7865570052329188 0.8893637997390287 0.8746922582933855 1.0 21.92001749256821 -9.664954900436662 10.671965670314924 0.9999999940387706 0.8509845861448189 0.1416918458576919 0.10787187864604528 0.0 0.0 0.11310886291138321 0.027432928558969987 2.162943124153023e-10 9.664954900436662 -0.14901540789395173 AGGGGGLGAGS(ph)PALSGGQGR ddPTM_KYSE-520_SHP099_60min_R1 8 AGGGGGLGAGSPALSGGQGR 20 0 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(1)PALSGGQGR;AGGGGGLGAGS(1)PALSGGQGR 306.18 5.822399999999999e-51 3305510000.0 3840800.0 5419600.0 3753560.0 3834750.0 3553780.0 4851140.0 3522510.0 4634910.0 5751610.0 4613350.0 True False 3627743.167555022 5159234.281014553 3995520.48350835 4199203.487040367 3833442.267757761 4820862.2358209845 3878599.6871846793 4618832.57900613 4707262.610289074 4572479.308131984 0.7933864590930386 1.1283231554135296 0.8738192595869084 0.9183646779051006 0.8383727972131282 1.0543212797589396 0.8482487127468754 1.01013744792496 1.0294770720815252 1.0 22.124545210676423 -7.472620623567619 21.99454845610622 1.0164281972908475 0.929860452884967 0.15570171992560167 0.09604503475057116 172.11477151961253 75323.0817134776 0.04947950887226261 0.023767511277854553 3.3680565631573976e-08 7.472620623567619 -0.08656774440588055 AGGLDWPEATEVS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 12 AGGLDWPEATEVSPSR 16 0 Q9Y446;Q9Y446-2;E9PKC4;E9PK71;E9PJR7;E9PRW6 Q9Y446 PKP3 Plakophilin-3 1 AGGLDWPEATEVS(0.991)PS(0.009)R;AGGLDWPEATEVS(0.999)PS(0.001)R;AGGLDWPEAT(0.093)EVS(0.871)PS(0.036)R;AGGLDWPEAT(0.002)EVS(0.98)PS(0.018)R;AGGLDWPEATEVS(0.896)PS(0.104)R;AGGLDWPEATEVS(0.992)PS(0.008)R;AGGLDWPEATEVS(0.985)PS(0.014)R;AGGLDWPEATEVS(0.988)PS(0.012)R;AGGLDWPEATEVS(0.999)PS(0.001)R;AGGLDWPEATEVS(0.997)PS(0.003)R;AGGLDWPEATEVS(0.998)PS(0.002)R;AGGLDWPEATEVS(0.998)PS(0.002)R 252.37 1.1707e-23 30896060000.0 14664730.0 15182810.0 12727360.0 10023550.0 11438210.0 13157770.0 11522570.0 12866310.0 15901030.0 13609310.0 True False 13851248.193485491 14453405.017737577 13547785.990095992 10976185.178309808 12338332.052487608 13075647.47680303 12687383.825046232 12821679.773629317 13013803.78434644 13488742.101282977 1.0268747144456143 1.0715161509658373 1.0043772716810562 0.8137293378354243 0.9147133186951548 0.9693748593176339 0.9405905850805374 0.9505467357411918 0.9647900216810164 1.0 23.68525247959507 -5.009424190037149 24.516167739836153 0.9328679472977914 1.0463832900756467 0.48469866134032735 0.047714262728698414 281.21868677337017 731572.6139020642 0.012979800803497622 0.024838268053613017 9.78533751642975e-06 5.009424190037149 0.11351534277785524 AGGPAT(ph)PLS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 AGGPATPLSPTR 12 0 Q03252 Q03252 LMNB2 Lamin-B2 2 AGGPAT(1)PLS(1)PTR;AGGPAT(1)PLS(0.991)PT(0.009)R 102.73 0.0057003 1161220000.0 2746900.0 2482470.0 2491590.0 2262630.0 2372030.0 2305820.0 2363710.0 2446220.0 2963010.0 2499530.0 True False 2594523.981190607 2363208.414936564 2652201.8780849543 2477669.674915483 2558695.265995481 2291428.522079498 2602656.874386533 2437734.6337720384 2425002.0754036903 2477386.108804913 1.047282848632021 0.9539120311272642 1.0705646038212318 1.0001144618150406 1.0328205429511315 0.9249379876376556 1.0505657011381446 0.9839946325314619 0.9788551194280763 1.0 21.24038730421761 AGGPAT(ph)PLSPTR ddPTM_KYSE-520_SHP099_60min_R1 2 AGGPATPLSPTR 12 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AGGPAT(1)PLSPTR;AGGPAT(1)PLSPTR 145.06 0.00012972 987980000.0 754120.0 749070.0 812450.0 666530.0 698860.0 805570.0 621370.0 851450.0 980580.0 727920.0 True False 712287.4602990495 713083.5528230071 864821.8269659622 729876.8108004475 753856.3060305321 800542.1388189816 684184.1435868031 848496.5186799247 802531.3904102076 721471.1951131901 0.9872708226241801 0.9883742520186588 1.1986921069389085 1.0116506601291804 1.044887600692445 1.1095968130694203 0.9483180315736138 1.1760643036438978 1.1123540286099711 1.0 19.460582270404952 -7.280570042214934 24.99489089404562 1.108156853280717 1.046906615893249 0.08471883419328952 0.07825923642286775 1973.0588239586307 2577856.988180885 0.04167858450190685 0.020064873881849334 5.2411906523330415e-08 7.280570042214934 -0.06125023738746793 AGGPATPLS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 AGGPATPLSPTR 12 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AGGPATPLS(0.997)PT(0.003)R;AGGPATPLS(0.98)PT(0.02)R 158.59 4.1096e-06 1618530000.0 917250.0 1088190.0 792800.0 610570.0 681670.0 1039160.0 675410.0 910300.0 1055660.0 967830.0 True False 866368.3140074577 1035911.7189935088 843905.1565248491 668598.3892254357 735313.550828254 1032674.2169831712 743687.0341663769 907142.3817656175 863978.7550229856 959255.7791603473 0.9031671560694734 1.0799118874219968 0.8797498799157962 0.6969969884473055 0.766545864828551 1.0765368730820557 0.7752750104016456 0.9456730951985033 0.9006761009865802 1.0 19.871556025993687 -8.958818139974408 14.456416193256201 1.0000070509625942 0.8910084755397522 0.07020165209246698 0.11831618317824981 0.0 0.0 0.11892092031897301 0.028842559739458075 1.0994661425007332e-09 8.958818139974408 -0.10899857542284208 AGGPS(ph)DDDNADKPK ddPTM_KYSE-520_SHP099_60min_R1 2 AGGPSDDDNADKPK 14 1 E7EVA0 E7EVA0 MAP4 Microtubule-associated protein 1 AGGPS(1)DDDNADKPK;AGGPS(1)DDDNADKPK 153.24 2.7667e-06 896460000.0 866100.0 791370.0 782640.0 788660.0 797600.0 648360.0 661190.0 915790.0 930200.0 749460.0 True False 818055.7064724551 753351.3973294119 833090.2266682754 863614.0092807239 860366.5822767835 644313.3447430695 728029.5377925519 912613.3382369935 761299.128433759 742820.3674710564 1.1012833550290746 1.014177088189179 1.1215231341926504 1.1626148758156851 1.1582431230391743 0.8673878274725347 0.9800882820043557 1.2285787765136273 1.024876486660717 1.0 19.502653847662007 AGGPTT(ph)PLS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 3 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFY5;A0A0D9SFE5 P20700 LMNB1 Lamin-B1 2 AGGPTT(1)PLS(1)PTR;AGGPT(0.025)T(0.889)PLS(0.899)PT(0.187)R;AGGPT(0.014)T(0.986)PLS(0.999)PT(0.001)R 169.79 3.0382999999999998e-06 1917630000.0 3393530.0 3252270.0 3168810.0 2850480.0 2948130.0 2576440.0 2623430.0 2893230.0 3554170.0 2839750.0 True False 3205284.126065664 3096026.0674432036 3373076.562875262 3121388.7621719413 3180131.0584348734 2560359.4822781053 2888631.9066094654 2883194.0604149564 2908822.3213345665 2814592.0242920695 1.1388094965101956 1.0999910611279164 1.1984246859804357 1.109002205375409 1.1298728309424328 0.9096733950001478 1.0263057244809817 1.0243737051518653 1.0334792027509556 1.0 21.42449438783348 -6.166514951820832 8.944307982475218 1.0021181540236512 1.1358021534400444 0.737367930012341 0.04069978103184404 0.19421412049140002 16.915963358358056 0.01338951135527314 0.013395662286531764 6.815301107133549e-07 6.166514951820832 0.1336839994163932 AGGPTT(ph)PLSPTR ddPTM_KYSE-520_SHP099_60min_R1 3 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFY5;A0A0D9SFE5 P20700 LMNB1 Lamin-B1 1 AGGPT(0.243)T(0.757)PLSPTR;AGGPT(0.17)T(0.828)PLS(0.001)PTR;AGGPT(0.023)T(0.77)PLS(0.089)PT(0.118)R 173.76 7.7055e-06 2667170000.0 1812850.0 2528840.0 1724150.0 1407840.0 1883790.0 2197940.0 1849440.0 2304900.0 2876860.0 2184810.0 True False 1712287.596673121 2407350.7305337735 1835291.467737539 1541640.6903174706 2032033.5557010807 2184221.8411755543 2036399.4439950061 2296904.8398677013 2354494.7437389228 2165454.2831564574 0.7907290447052147 1.1117070211358688 0.8475318467875207 0.7119248382701067 0.9383867262896463 1.0086667994633165 0.9404028798182082 1.0607034550365275 1.0872982921195233 1.0 21.046238284024884 -6.126053238810293 3.977843832036432 1.018087715769383 0.8765989224056643 0.3295558104572407 0.10225908725957666 0.32662200186419194 8.899117398456124 0.03643037820672521 0.036712991946824786 7.480777903595294e-07 6.126053238810293 -0.14148879336371878 AGGPTTPLS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 6 AGGPTTPLSPTR 12 0 P20700;E9PBF6;A0A0D9SFY5;A0A0D9SFE5 P20700 LMNB1 Lamin-B1 1 AGGPT(0.002)T(0.002)PLS(0.996)PTR;AGGPT(0.001)T(0.003)PLS(0.99)PT(0.007)R;AGGPTT(0.002)PLS(0.995)PT(0.003)R;AGGPTT(0.006)PLS(0.976)PT(0.018)R;AGGPTT(0.001)PLS(0.965)PT(0.034)R;AGGPT(0.002)T(0.007)PLS(0.84)PT(0.151)R 108.38 0.00033868 6462560000.0 4587250.0 6164970.0 4614170.0 3675260.0 4318410.0 5335960.0 4248510.0 4813460.0 6447150.0 5282230.0 True False 4332786.098043832 5868795.587391366 4911606.781133026 4024555.605392786 4658244.2986081755 5302656.294366143 4677990.852261886 4796763.230730008 5276510.079425618 5235433.55171276 0.8275887861524612 1.1209760432297728 0.9381470956739018 0.7687148668091036 0.8897533036369532 1.0128399571858555 0.8935250168023797 0.9162112713971431 1.0078458693644234 1.0 22.3198775825083 -7.763235157408153 24.94813451725419 1.003922979652219 0.9242408397414826 0.11692566871437582 0.09083280374855066 112.3472405036973 1560581.9079711651 0.0760879779418138 0.02355557682799164 1.7249036555993164e-08 7.763235157408153 -0.07968213991073647 AGGSAALS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 6 AGGSAALSPSK 11 0 Q92522 Q92522 H1FX Histone H1x 1 AGGSAALS(1)PSK;AGGSAALS(1)PSK;AGGSAALS(0.987)PS(0.013)K;AGGSAALS(0.998)PS(0.002)K;AGGSAALS(0.998)PS(0.002)K;AGGSAALS(0.939)PS(0.061)K 214.42 1.1355999999999999e-09 45603000000.0 44074100.0 48840300.0 34244500.0 25602300.0 27737500.0 44764100.0 32964800.0 40259900.0 45520300.0 45528100.0 True False 41629221.81345988 46493938.67721509 36451955.2631373 28035534.89438779 29920283.445213456 44484710.647500254 36297203.68944466 40120247.803631335 37254960.993381284 45124756.45432581 0.9225362103748078 1.0303421520795384 0.80780392244406 0.6212894450248099 0.6630569513543645 0.9858160828530256 0.8043745061800791 0.8890961626405692 0.8255991593237707 1.0 25.427415809771798 -8.745862028258811 14.126949076658683 0.9999999999998856 0.8368094999821186 0.13583019997725365 0.12181899665730081 0.0 0.0 0.12860919927237596 0.031192312530948008 1.7953038893427748e-09 8.745862028258811 -0.16319050001776703 AGGSAALS(ph)PSKK ddPTM_KYSE-520_SHP099_60min_R1 5 AGGSAALSPSKK 12 1 Q92522 Q92522 H1FX Histone H1x 1 AGGSAALS(0.946)PS(0.054)KK;AGGSAALS(0.5)PS(0.5)KK;AGGSAALS(0.975)PS(0.025)KK;AGGSAALS(0.999)PS(0.001)KK;AGGSAALS(0.999)PS(0.001)KK 236.22 3.3558e-15 12689230000.0 10445400.0 10450200.0 7790420.0 6710250.0 6774290.0 9986900.0 7440740.0 9187920.0 10533600.0 10596900.0 True False 9865972.839611346 9948156.705929998 8292602.938312716 7347990.142489771 7307388.082562432 9924568.052647538 8192922.61382439 9156049.249996651 8620963.770447042 10503019.710263452 0.9393463129437347 0.9471710974900631 0.7895446421193767 0.699607383894499 0.6957416328012525 0.9449252049817011 0.7800540073078548 0.8717539814811017 0.8208081112161217 1.0 23.32430083921655 -9.25156898855125 11.083183835804068 0.9999999813978603 0.8292839774199101 0.24045224434880685 0.0893934602117063 0.0 0.0 0.09273944199727868 0.022492618530330737 5.603134033841595e-10 9.25156898855125 -0.17071600397795017 AGGSAALSPS(ph)KK ddPTM_KYSE-520_SHP099_60min_R1 2 AGGSAALSPSKK 12 1 Q92522 Q92522 H1FX Histone H1x 1 AGGSAALS(0.318)PS(0.682)KK;AGGSAALS(0.045)PS(0.955)KK 172.1 2.0037999999999998e-06 1985040000.0 2982600.0 3153900.0 2194200.0 1683060.0 1995180.0 2889900.0 1968280.0 2679000.0 2873100.0 2795900.0 True False 2817149.2323343074 3002381.9098995873 2335641.6428441284 1843017.5163695586 2152189.3149786745 2871863.062146023 2167252.9509616364 2669707.1742833033 2351417.464957034 2771130.5011772867 1.0166064828550911 1.0834502051145032 0.8428479430513485 0.665077850208271 0.7766466841111737 1.0363507099091656 0.7820826013213383 0.9634000178443799 0.8485408622791523 1.0 21.402043222751963 -4.765080023172776 24.999652246489045 0.8560141928932867 1.0500283763054936 0.32101677179735344 0.1074569293901911 96.38973818392026 661910.5656900692 0.028682396760370595 0.06368572267764187 1.71759187423644e-05 4.765080023172776 0.1940141834122069 AGGVMVMPEGADTVSRPS(ph)PDYPMLPTIPLSAFSDPKK ddPTM_KYSE-520_SHP099_60min_R1 2 AGGVMVMPEGADTVSRPSPDYPMLPTIPLSAFSDPKK 37 2 Q03111 Q03111 MLLT1 Protein ENL 1 AGGVMVMPEGADT(0.135)VS(0.121)RPS(0.744)PDYPMLPTIPLSAFSDPKK;AGGVMVMPEGADT(0.004)VS(0.004)RPS(0.992)PDYPMLPTIPLSAFSDPKK 165.97 2.0029e-10 570180000.0 392390.0 492100.0 346080.0 324250.0 339900.0 465010.0 320670.0 395550.0 554370.0 364360.0 True False 370623.3444899276 468458.77734284074 368388.87054757855 355066.62251068314 366648.1962335493 462107.7001032985 353086.4530376104 394177.92937206425 453710.3825304478 361132.05386779056 1.0262820497944825 1.2971952290735793 1.0200946346414452 0.9832043949238359 1.0152745853121588 1.2796086505034385 0.9777211666923212 1.091506348302086 1.2563558888531947 1.0 18.462166953166314 AGHDDVPPLS(ph)PLLPPMQNNQIQR ddPTM_KYSE-520_SHP099_60min_R1 4 AGHDDVPPLSPLLPPMQNNQIQR 23 0 O14544 O14544 SOCS6 Suppressor of cytokine signaling 6 1 AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR;AGHDDVPPLS(1)PLLPPMQNNQIQR 154.86 1.3173e-07 2745480000.0 615732.0 614608.0 570175.0 619966.0 667897.0 1560620.0 1322470.0 1899760.0 2041450.0 1736490.0 True False 581576.1185286891 585081.3091345838 606929.3928122555 678887.382240425 720456.694085903 1550879.591697405 1456158.17366342 1893170.175967319 1670774.1407666053 1721106.049568777 0.337908357636883 0.33994494951730364 0.35263916070966206 0.3944483156110689 0.4186009887458204 0.9010947303833938 0.846059529003608 1.0999729949480177 0.9707560676956645 1.0 20.71490456413009 -6.295820485651813 1.9634857548586484 0.9954711599492516 0.34688290248223597 0.9588438245129348 0.06178555055649825 0.05975273375857173 0.45292483451291843 0.024744078619500447 0.022157220607036388 5.060337863585893e-07 6.295820485651813 -0.6485882574670156 down AGIPQHHPPMAQNLQYPDDS(ph)DDEK ddPTM_KYSE-520_SHP099_60min_R1 4 AGIPQHHPPMAQNLQYPDDSDDEK 24 0 Q15223 Q15223 PVRL1 Nectin-1 1 AGIPQHHPPMAQNLQYPDDS(1)DDEK;AGIPQHHPPMAQNLQYPDDS(1)DDEK;AGIPQHHPPMAQNLQYPDDS(1)DDEK;AGIPQHHPPMAQNLQYPDDS(1)DDEK 224.91 1.5243e-21 2834920000.0 1450560.0 1430870.0 1223850.0 1741260.0 1772720.0 1704530.0 1615900.0 1857020.0 2397590.0 1414430.0 True False 1370094.54518033 1362128.8574203432 1302741.329229235 1906748.8268710915 1912222.9786029349 1693891.3960066997 1779250.9416642482 1850578.4310517241 1962248.0943254123 1401899.2506098868 0.9773131304437745 0.9716310618097258 0.9292688676896618 1.3601183009703253 1.3640231120539048 1.2082832594922805 1.2691717617298084 1.320050945349063 1.399706928633958 1.0 20.418951241163242 -5.257159069225298 24.99739586891344 1.2885663364534123 0.960627003838564 0.6416846679909184 0.10753224638593555 208.57651732835538 1218101.2597850657 0.028080749604246134 0.04651680290704023 5.531474705475361e-06 5.257159069225298 -0.3279393326148483 AGIPQHHPPMAQNLQYPDDS(ph)DDEKK ddPTM_KYSE-520_SHP099_60min_R1 13 AGIPQHHPPMAQNLQYPDDSDDEKK 25 1 Q15223 Q15223 PVRL1 Nectin-1 1 AGIPQHHPPMAQNLQYPDDS(1)DDEKK;AGIPQHHPPMAQNLQYPDDS(1)DDEKK;AGIPQHHPPMAQNLQYPDDS(1)DDEKK;AGIPQHHPPMAQNLQYPDDS(1)DDEKK;AGIPQHHPPMAQNLQYPDDS(1)DDEKK;AGIPQHHPPMAQNLQY(0.002)PDDS(0.998)DDEKK;AGIPQHHPPMAQNLQYPDDS(1)DDEKK;AGIPQHHPPMAQNLQY(0.002)PDDS(0.998)DDEKK;AGIPQHHPPMAQNLQYPDDS(1)DDEKK;AGIPQHHPPMAQNLQYPDDS(1)DDEKK;AGIPQHHPPMAQNLQYPDDS(1)DDEKK;AGIPQHHPPMAQNLQYPDDS(1)DDEKK;AGIPQHHPPMAQNLQYPDDS(1)DDEKK 223.27 1.1004000000000002e-21 49044980000.0 8426529.0 9286194.0 7251088.0 10943552.0 10832748.0 10216550.0 10043744.0 11917060.0 15066850.0 8599064.0 True False 7959092.638500889 8840071.301378634 7718504.734631001 11983623.891781108 11685223.637695165 10152784.721813198 11059063.661015313 11875722.500322726 12331089.844379893 8522882.982930558 0.9338498081507377 1.0372160827601804 0.9056213431639801 1.4060528480540735 1.3710411912375278 1.191238310105509 1.2975730962356473 1.39339264942475 1.4468214416502405 1.0 23.02291009386368 -5.25849718439732 24.999695388487076 1.3154834973713314 0.9667277628709378 0.6043562116660255 0.12636456396293808 165.8806754583723 1409473.8801867238 0.03359114387394795 0.0551079021019931 5.514457774839858e-06 5.25849718439732 -0.34875573450039365 AGIPVYAWK ddPTM_KYSE-520_SHP099_60min_R1 1 AGIPVYAWK 9 0 P23526;P23526-2 P23526 AHCY Adenosylhomocysteinase 0 175.75 0.00038746 924720000.0 1373000.0 1503600.0 994300.0 944630.0 1380300.0 1569400.0 1067300.0 1124200.0 1103400.0 1110800.0 False True 1296836.9529923578 1431364.7990503875 1058394.1689362484 1034407.3511866356 1488921.7571673086 1559604.79246063 1175193.0998442068 1120300.4125902536 903050.3744504516 1100959.1761893223 1.1779155676607505 1.300107061194291 0.9613382510690348 0.9395510510816231 1.3523859824855775 1.4165873051340447 1.06742659061331 1.0175676235951598 0.8202396546401662 1.0 20.070329543765833 -7.2510308186767265 2.7496696191593264 0.9221745875466344 1.1828563831648444 0.3394499527845115 0.15223481957708304 0.3569355574156485 5.321216790405228 0.10307861018322578 0.04683141820079428 5.610081640075942e-08 7.2510308186767265 0.26068179561821003 AGKEPAKPS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 3 AGKEPAKPSPSR 12 2 Q15311 Q15311 RALBP1 RalA-binding protein 1 1 AGKEPAKPS(0.868)PS(0.132)R;AGKEPAKPS(0.971)PS(0.029)R;AGKEPAKPS(0.91)PS(0.09)R 88.73 0.0022307 10327620000.0 1876510.0 1843680.0 1941150.0 1675060.0 1733810.0 1801280.0 1616700.0 1710510.0 2136160.0 1554980.0 True False 1772416.2495700566 1755106.8453798983 2066279.6349498131 1834257.1987748484 1870250.9829705474 1790037.5433691093 1780131.813471496 1704576.6400460366 1748287.1922114175 1541204.0869561352 1.150020470728548 1.1387893791835313 1.340691769790656 1.1901455584623386 1.2134998854462402 1.161453929767613 1.1550266629432842 1.1060031922265148 1.1343644926768068 1.0 20.55562648616976 -7.900070700467035 0.5506822179437655 1.0008492875526351 1.2114930831715032 0.5573666456293254 0.05411513039083545 0.6834996849009586 0.5105720768535507 0.060418204930880764 0.02886942767436628 1.258720483171278e-08 7.900070700467035 0.21064379561886803 AGKEPAKPS(ph)PSRDR ddPTM_KYSE-520_SHP099_60min_R1 2 AGKEPAKPSPSRDR 14 3 Q15311 Q15311 RALBP1 RalA-binding protein 1 1 AGKEPAKPS(0.956)PS(0.044)RDR;AGKEPAKPS(0.991)PS(0.009)RDR 78.441 0.015037 1782060000.0 1309460.0 1282320.0 1297080.0 1005250.0 1112670.0 1080600.0 915630.0 870420.0 1543980.0 777850.0 True False 1236821.6434562074 1220715.4223984391 1380691.8522013777 1100788.6577605668 1200230.7987737064 1073855.5745717834 1008190.816087651 867400.7161775561 1263632.1525684325 770958.8541581429 1.604264140408334 1.5833729852307266 1.7908761858751068 1.4278176478854832 1.5568026650194084 1.392883120519307 1.3077102761710364 1.1250933970071904 1.6390396786457166 1.0 19.556294340431844 -6.466245785936693 0.05707261406694413 2.73147573886761e-12 2.8803440740809285 0.5523825385274741 0.15496233498356488 44.82144479702822 1.2074330289909647 26.203739789091546 33.65863725354317 3.417859563867092e-07 6.466245785936693 2.880344074078197 AGKEPAKPSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 AGKEPAKPSPSR 12 2 Q15311 Q15311 RALBP1 RalA-binding protein 1 1 AGKEPAKPS(0.209)PS(0.791)R;AGKEPAKPS(0.112)PS(0.888)R;AGKEPAKPS(0.418)PS(0.582)R 110.78 0.0001369 13418800000.0 6154900.0 5172800.0 5493400.0 5329900.0 5333800.0 5279700.0 5023400.0 5056100.0 6857300.0 4918910.0 True False 5813475.427511037 4924290.9234689 5847513.35375077 5836452.09350713 5753539.714829371 5246747.433894728 5531214.295659503 5038561.569202616 5612187.178465728 4875332.28425407 1.192426503171261 1.0100421133084512 1.199408166010872 1.197139344195513 1.1801328359528764 1.076182530335465 1.1345307300435181 1.0334806481756595 1.1511394200948084 1.0 22.21706912018819 -8.339314749503364 0.44066975650662144 0.9941006363067246 1.148777615176639 0.29794420472443883 0.06388292729654413 2.3023410725744027 0.9500214614340583 0.11030713310379672 0.042344551597970896 4.578099743914637e-09 8.339314749503364 0.15467697886991427 AGKES(ph)DEKEQEQDKDR ddPTM_KYSE-520_SHP099_60min_R1 4 AGKESDEKEQEQDKDR 16 3 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 AGKES(1)DEKEQEQDKDR;AGKES(1)DEKEQEQDKDR;AGKES(1)DEKEQEQDKDR;AGKES(1)DEKEQEQDKDR 125.92 0.00012102 6927500000.0 3166850.0 2489420.0 2245240.0 2651220.0 2842230.0 2506850.0 2623170.0 2811700.0 3178190.0 2299220.0 True False 2991178.517541037 2369824.5265043997 2389971.7629110147 2903191.1516816393 3065897.3309234492 2491203.8192812097 2888345.6232721102 2801946.868955714 2601110.811650062 2278850.6995660923 1.312582047656995 1.039920924593976 1.0487618883352388 1.2739716350151526 1.3453699847503022 1.0931843054727328 1.2674571545306015 1.2295438527364793 1.1414134379866703 1.0 21.11987497788907 -8.083843011659852 4.84456432907801 1.0000263804220337 1.1963744588774479 0.26133053809903706 0.1023810958279222 0.7114964576309832 37.61576004014745 0.10209690738270158 0.0266297188599882 8.244360774947507e-09 8.083843011659852 0.19634807845541413 AGKLS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 1 AGKLSPLK 8 1 Q03164-2;Q03164;Q03164-3;E9PR05;H0YNL8;P48200-2;P48200 Q03164-2;H0YNL8 KMT2A;IREB2 Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180;Iron-responsive element-binding protein 2 1 AGKLS(1)PLK 76.92699999999999 0.023133 8450500000.0 5349700.0 4737400.0 4384700.0 3944100.0 3491800.0 4345200.0 4158400.0 4427200.0 5117000.0 4140500.0 True False 5052941.476637444 4509808.193017632 4667344.7777680475 4318946.078163092 3766584.7943757214 4318079.995029903 4578771.654073035 4411843.076516251 4187881.7890728316 4103818.391260251 1.2312780427609822 1.098929768096464 1.1373175742152521 1.0524213467537917 0.9178244345308448 1.0522103035129324 1.1157344739777653 1.075058069312226 1.0204841905264637 1.0 21.96853545723174 -4.2169264866689335 0.9985269442892415 1.0388720540695713 1.3292664895091433 0.5409976492079362 0.05446628659482767 1.8423589030954737 1.3972672786026827 0.019583193762167942 0.5877572422208754 6.068390409646499e-05 4.2169264866689335 0.290394435439572 AGKLS(ph)PLKVQPK ddPTM_KYSE-520_SHP099_60min_R1 1 AGKLSPLKVQPK 12 2 H0YNL8;P48200-2;P48200 H0YNL8 IREB2 Iron-responsive element-binding protein 2 1 AGKLS(1)PLKVQPK 75.764 0.012184 656170000.0 507960.0 574240.0 580760.0 295750.0 394990.0 348710.0 248390.0 266870.0 589440.0 333130.0 True False 479782.44620684494 546652.648448188 618196.7188488538 323857.99107952026 426073.4658143257 346533.5715425936 273499.68525278976 265944.290257926 482412.5545732047 330178.72737121827 1.4530992048661813 1.6556264929617623 1.872309351273919 0.9808566216787442 1.2904328186330838 1.04953330670812 0.8283382985642666 0.8054555554662556 1.461064916004812 1.0 18.332887648277723 -5.2697672838603955 24.851651910987115 1.0508668351641868 1.659873168577539 0.6375962113777791 0.20755561853653204 347.3923108912759 1036667.9203321107 0.0593793977141806 0.0897468598413528 5.3731964128146456e-06 5.2697672838603955 0.6090063334133522 AGKPVICATQMLESMIK ddPTM_KYSE-520_SHP099_60min_R1 3 AGKPVICATQMLESMIK 17 1 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;; 179.46 8.553200000000001e-09 673075000.0 1460790.0 1084212.0 865967.0 1120146.0 1571503.0 1292510.0 709774.0 933776.0 847361.0 517451.0 False True 1379757.0666873315 1032124.8280846087 921788.6184161885 1226604.3390558262 1695171.3454710518 1284442.9656577597 781524.8826466993 930536.9490009572 693501.6026325083 512866.78671078605 2.6902835247652703 2.012461822111793 1.7973256258764134 2.3916626516653894 3.3052858742186135 2.504437797376959 1.5238360192106064 1.8143833313302509 1.3522061100509226 1.0 18.96822461974473 -6.765511710450965 22.832669905810558 1.4904708424433786 2.4368687007498155 0.5855878223264017 0.42187967260103243 30.338461909112137 170093.24797093598 0.18815620042548262 0.1323905417212395 1.7158854418305256e-07 6.765511710450965 0.946397858306437 AGLAALS(ph)PLLR ddPTM_KYSE-520_SHP099_60min_R1 1 AGLAALSPLLR 11 0 P49189-3 P49189-3 1 AGLAALS(1)PLLR 77.813 0.0136 46178000.0 77277.0 101280.0 72820.0 58672.0 75132.0 90419.0 66603.0 87282.0 91577.0 87019.0 True False 72990.29076211968 96414.35677562078 77514.09371611946 64248.16923962001 81044.46095739632 89854.66148177485 73335.88122263992 86979.23911377203 74948.92526830606 86248.07935975757 0.8462830859996654 1.1178725079019751 0.8987341433168969 0.7449228981856901 0.9396668489201256 1.0418163760722545 0.8502900211463451 1.0084774033165962 0.8689923975660893 1.0 16.396204709614516 -5.984491051138988 24.99705819681478 0.9527211175131158 0.9077896846687185 0.05328397334714796 0.1026207077287547 994.7229482685735 1603268.8247388066 0.03271802330013779 0.03708827048002964 1.0363559588582145e-06 5.984491051138988 -0.04493143284439738 AGLCPDEDDMEGDS(ph)FFDDPIPKPEK ddPTM_KYSE-520_SHP099_60min_R1 1 AGLCPDEDDMEGDSFFDDPIPKPEK 25 1 O95684;O95684-2;A0A087WV25 O95684 FGFR1OP FGFR1 oncogene partner 1 AGLCPDEDDMEGDS(1)FFDDPIPKPEK 53.482 0.044723 183660000.0 143850.0 187270.0 141820.0 135730.0 118080.0 133820.0 123600.0 157820.0 162830.0 177450.0 True False 135870.35374213444 178273.26810199933 150961.944120023 148629.7383912874 127372.2242167034 132984.77974199154 136094.69421975422 157272.55925546482 133264.17661026563 175877.93105401084 0.7725264501798673 1.0136193155879967 0.8583336363768327 0.8450732704243847 0.7242081110084716 0.7561197641172666 0.773801996669841 0.89421429006444 0.7577083481232285 1.0 17.424214941007932 -5.2626618272570935 3.1030760540464235 0.8067026903943307 0.8985215073956536 0.06890636025728014 0.09414552254451504 0.48294928031803924 9.546479992263466 0.026001790604733455 0.04528156097013649 5.461829926901559e-06 5.2626618272570935 0.09181881700132288 AGLES(ph)GAEPGDGDS(ph)DTTK ddPTM_KYSE-520_SHP099_60min_R1 2 AGLESGAEPGDGDSDTTK 18 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 AGLES(1)GAEPGDGDS(1)DTTK;AGLES(1)GAEPGDGDS(1)DTTK 257.22 2.8800999999999997e-28 438540000.0 1918180.0 1710460.0 1712600.0 1644110.0 1691100.0 1556700.0 1574270.0 1817580.0 2053050.0 1744070.0 True False 1811774.7316029728 1628286.9341471982 1822996.9362568827 1800365.7200803058 1824179.9489572083 1546984.0578714535 1733412.5749945997 1811275.2392063607 1680267.8731788117 1728618.896665928 1.0481053603529566 0.9419583097742106 1.0545973665872717 1.0415052869968964 1.0552817353064887 0.8949248795412323 1.0027731261864126 1.0478164057444102 0.972029101625365 1.0 20.721188406786847 AGLES(ph)GAEPGDGDS(ph)DTTKK ddPTM_KYSE-520_SHP099_60min_R1 1 AGLESGAEPGDGDSDTTKK 19 1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 AGLES(1)GAEPGDGDS(0.348)DT(0.348)T(0.305)KK 55.705 0.042225 624800000.0 526380.0 455110.0 503320.0 444390.0 475510.0 491640.0 412560.0 516830.0 579350.0 507170.0 True False 497180.6520874851 433245.8324659627 535764.8125404742 486624.69198927435 512929.93171819625 488571.49239540123 454265.59099758836 515037.23735902837 474154.6442250039 502676.8683722887 0.9890661046278083 0.8618774002250198 1.0658234867168788 0.968066610196342 1.0203969269147153 0.9719394767008837 0.9036930473219102 1.0245890944350864 0.943259326334943 1.0 18.939271776654078 -4.751146392132421 24.999657584967025 0.9850710434754661 0.925471811824488 0.18635983121452904 0.05145300371541513 344.0842927578655 835697.1683635501 0.012503265852856207 0.03228953300750395 1.773591537276631e-05 4.751146392132421 -0.059599231650978135 AGLESGAEPGDGDS(ph)DTTK ddPTM_KYSE-520_SHP099_60min_R1 10 AGLESGAEPGDGDSDTTK 18 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLESGAEPGDGDS(1)DTTK;AGLESGAEPGDGDS(1)DTTK;AGLESGAEPGDGDS(1)DTTK;AGLESGAEPGDGDS(0.858)DT(0.136)T(0.006)K;AGLESGAEPGDGDS(0.989)DT(0.01)T(0.001)K;AGLESGAEPGDGDS(0.998)DT(0.002)TK;AGLESGAEPGDGDS(1)DTTK;AGLESGAEPGDGDS(1)DTTK;AGLESGAEPGDGDS(1)DTTK;AGLESGAEPGDGDS(1)DTTK 414.22 9.107999999999997e-102 16468600000.0 13255230.0 11466240.0 10877170.0 9401300.0 9842750.0 11005860.0 10394490.0 12034260.0 13383230.0 11677700.0 True False 12519935.968254086 10915384.619222885 11578329.782287326 10294796.72539609 10617318.42741326 10937168.345323533 11445266.489646384 11992515.96087741 10953172.795773543 11574244.663113134 1.0817065245004582 0.9430753312144834 1.0003529490945713 0.8894573274578671 0.9173227918060539 0.9449574174097123 0.9888564500560628 1.0361381074911347 0.9463401815481806 1.0 23.464414710281257 -6.877835496249219 6.045154759739087 0.9969550534395434 0.9583460271670348 0.06768924711334501 0.05286040835716454 0.5298757732580762 25.938937509762393 0.02274977475031708 0.015258444013158196 1.324843269443918e-07 6.877835496249219 -0.03860902627250862 AGLESGAEPGDGDS(ph)DTTKK ddPTM_KYSE-520_SHP099_60min_R1 5 AGLESGAEPGDGDSDTTKK 19 1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AGLESGAEPGDGDS(0.974)DT(0.025)T(0.001)KK;AGLESGAEPGDGDS(0.94)DT(0.056)T(0.004)KK;AGLESGAEPGDGDS(1)DTTKK;AGLESGAEPGDGDS(0.997)DT(0.002)T(0.002)KK;AGLESGAEPGDGDS(1)DTTKK 204.96 8.6132e-14 24731700000.0 20498800.0 16687700.0 17697600.0 15944300.0 15999830.0 15348800.0 16647700.0 18136800.0 19509100.0 16917000.0 True False 19361690.70065531 15885997.84325164 18838415.613161165 17459641.47817142 17258925.594420172 15253002.445851712 18330611.981894836 18073887.67396093 15966739.224389432 16767128.541226843 1.1547409953379306 0.9474489209163818 1.1235326052902537 1.0413018207167573 1.0293310242110987 0.9096967562661541 1.0932469406925411 1.0779357735297992 0.9522643775963533 1.0 23.999132305168878 -4.236591087791883 24.091967438904856 1.0249787395439294 1.1547412567927793 0.27519250006648033 0.06532638931379961 6465.5736576444815 6268625.831729863 0.015975028120043158 0.9788394519751435 5.7997451742277646e-05 4.236591087791883 0.1297625172488499 AGLGS(ph)PERPPK ddPTM_KYSE-520_SHP099_60min_R1 9 AGLGSPERPPK 11 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK;AGLGS(1)PERPPK 158.34 3.7647e-05 104501600000.0 27485110.0 23996410.0 24231450.0 21632340.0 23053080.0 23230260.0 23491160.0 24199290.0 27263520.0 24624910.0 True False 25960456.158091597 22843586.444254253 25793448.038690798 23688271.089599837 24867226.241917312 23085271.330512583 25865875.704428196 24115348.31114674 22313152.025409993 24406752.45529009 1.0636587643377662 0.9359535434343693 1.056816062929345 0.970562189008701 1.0188666553434649 0.9458559213398716 1.0597835886528133 0.9880605113409838 0.9142204423257336 1.0 24.54077700814912 -7.534940729144693 24.68051648478217 0.9551202731853167 1.0046567385558949 0.1487958289080683 0.04740233641899278 350.22185432415483 716584.8672310067 0.0290133806450888 0.010983170639743333 2.917825200489323e-08 7.534940729144693 0.04953646537057821 AGLGS(ph)PERPPKT(ph)SPGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 3 AGLGS(1)PERPPKT(0.523)S(0.523)PGS(0.955)PR;AGLGS(1)PERPPKT(0.568)S(0.439)PGS(0.993)PR;AGLGS(1)PERPPKT(0.581)S(0.42)PGS(0.998)PR;AGLGS(1)PERPPKT(0.568)S(0.47)PGS(0.962)PR;AGLGS(1)PERPPKT(0.579)S(0.579)PGS(0.841)PR 101.5 0.0014567 5172840000.0 3390590.0 3368030.0 3067340.0 3025140.0 3196970.0 3009980.0 2738880.0 3134650.0 3977650.0 2918010.0 True False 3202507.213726409 3206224.7832839 3265065.644317521 3312648.39605849 3448553.35072895 2991193.598324612 3015752.719292889 3123776.6307828124 3255409.028396629 2892158.7015774245 1.1073068749580428 1.108592271072531 1.1289372338166324 1.1453895646361745 1.192380400442085 1.034242552697116 1.0427341755651425 1.0800847924005899 1.1255983382312604 1.0 21.463715288866595 -6.276810017978863 24.99801297797981 1.06067490768712 1.1350410084373785 0.5283163981270578 0.03767579510151153 745.0624938219289 1211727.4200724973 0.01375495668090752 0.012178243115323239 5.286764705985482e-07 6.276810017978863 0.07436610075025851 AGLGS(ph)PERPPKTS(ph)PGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 3 AGLGS(0.703)PERPPKT(0.354)S(0.943)PGS(1)PR;AGLGS(1)PERPPKT(0.005)S(0.995)PGS(1)PR;AGLGS(1)PERPPKT(0.001)S(0.999)PGS(1)PR;AGLGS(1)PERPPKT(0.195)S(0.805)PGS(1)PR 270.35 1.6312999999999998e-29 1754880000.0 2813870.0 2671770.0 2586100.0 2527240.0 2478300.0 2456660.0 2377030.0 2559610.0 3228160.0 2493580.0 True False 2657779.021789225 2543414.15879147 2752804.1439062976 2767428.1297575845 2673328.1104018954 2441327.073688246 2617323.389977204 2550731.310327467 2642007.519291255 2471488.821175882 1.0753757002731292 1.029102028299431 1.1138242343319893 1.1197413097911164 1.0816670856435362 0.9877961222283473 1.0590067685323121 1.0320626532770976 1.0689943230389543 1.0 21.236948950343397 -6.108286458939614 10.989401411463124 1.0334446051717407 1.0848927932280548 0.41368170597179876 0.03221213575672623 0.5857988837428918 56.15710927828619 0.010953703195395792 0.010956720526057284 7.79315907237966e-07 6.108286458939614 0.051448188056314015 AGLGS(ph)PERPPKTSPGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 AGLGS(0.94)PERPPKT(0.026)S(0.034)PGS(1)PR;AGLGS(0.961)PERPPKT(0.041)S(0.025)PGS(0.973)PR 143.48 4.6642e-06 5282500000.0 2218410.0 2062810.0 2294750.0 1967730.0 1979140.0 1983970.0 1875710.0 2051570.0 2674550.0 1863750.0 True False 2095350.375009305 1963709.5112590648 2442673.256729815 2154742.4675804013 2134887.058233791 1971587.3073136976 2065325.0719654988 2044453.5825100373 2188919.1399188447 1847238.6249755586 1.1343149426820962 1.063051348487826 1.3223376902711392 1.1664667674480396 1.1557180698633553 1.0673159821675904 1.1180607876217539 1.1067620365165807 1.1849682603663654 1.0 20.816938814005155 -6.080342736778408 5.4329139363291326 1.1036554925734037 1.173176167326573 0.19323662243755502 0.0740582337008921 0.4308822487176112 21.709497277636547 0.024873760497044144 0.025136823598972537 8.311076182190265e-07 6.080342736778408 0.06952067475316936 AGLGSPERPPKT(ph)SPGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 AGLGS(0.002)PERPPKT(0.757)S(0.244)PGS(0.997)PR;AGLGS(0.027)PERPPKT(0.628)S(0.345)PGS(1)PR 127.3 0.00010070000000000001 10130900000.0 5485700.0 4922000.0 5065300.0 4529500.0 4872400.0 4639000.0 4659700.0 5336200.0 6017400.0 4256900.0 True False 5181397.285528162 4685539.731927381 5391817.342766555 4959982.3181561725 5255830.159836253 4610046.280250317 5130747.950289556 5317689.96767844 4924791.846309721 4219187.177818083 1.2280558001239654 1.1105313735690836 1.2779279789039575 1.1755776904690882 1.2456973199644252 1.0926384836603442 1.2160512757679736 1.2603588661900604 1.1672371096028347 1.0 22.00853366127107 -8.032021518017517 22.54803978924678 0.9999999977403716 1.1989542686528256 0.521368781915907 0.05744528706856072 896.4943136428055 631268.895531329 0.0530829119450038 0.013705948936861128 9.289203603609654e-09 8.032021518017517 0.198954270912454 AGLGSPERPPKT(ph)SPGSPR ddPTM_KYSE-520_SHP099_60min_R1 2 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 AGLGS(0.09)PERPPKT(0.469)S(0.375)PGS(0.065)PR;AGLGSPERPPKT(0.618)S(0.364)PGS(0.018)PR 134.32 2.2101e-05 3591500000.0 972290.0 953960.0 900720.0 724090.0 791050.0 815610.0 839410.0 836010.0 1078550.0 729330.0 True False 918355.135487937 908130.3296768469 958781.8524029553 792907.2958944035 853301.1345411842 810519.475454833 924265.7546521352 833110.0764362009 882712.5080329286 722868.7036101536 1.270431450277878 1.2562866882207777 1.3263568440777742 1.0968897836280127 1.1804372360839865 1.1212540692478918 1.2786080653874814 1.1525053889807089 1.2211242562092983 1.0 19.463374105220478 -13.999999999999998 0.12680951388187375 0.34252942800104097 1.297037459414158 0.4859722298723579 0.06773927466192643 136.1519674940664 1.0973604411690312 23.079865632177633 0.5743887254163464 1.0000000000000041e-14 13.999999999999998 0.9545080314131171 AGLGSPERPPKTS(ph)PGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 AGLGS(0.091)PERPPKT(0.397)S(0.512)PGS(1)PR;AGLGS(0.003)PERPPKT(0.067)S(0.93)PGS(1)PR;AGLGS(0.011)PERPPKT(0.427)S(0.562)PGS(1)PR;AGLGS(0.286)PERPPKT(0.147)S(0.581)PGS(0.986)PR 165.9 1.1697000000000001e-07 9714740000.0 6761130.0 6189640.0 6888770.0 5929070.0 6019920.0 5827980.0 5558500.0 6206790.0 8178580.0 5684120.0 True False 6386076.640921497 5892280.403560945 7332831.136621715 6492567.030160099 6493653.455340585 5791605.415040585 6120407.425732233 6185260.094165684 6693556.0372240115 5633763.118978441 1.1335365910946344 1.0458871413516904 1.3015866982265598 1.1524387683764354 1.1526316102048086 1.0280172049709406 1.0863799731150277 1.0978914028758888 1.1881145685155716 1.0 22.425667473779004 -6.110437372991612 8.877130968107556 1.0866498325618712 1.1595620526599595 0.21007616895417403 0.07429025994030083 0.6075311795724521 44.73834097131858 0.024841335564531386 0.024861653869499213 7.754657605740515e-07 6.110437372991612 0.07291222009808829 AGLGSPERPPKTS(ph)PGSPR ddPTM_KYSE-520_SHP099_60min_R1 1 AGLGSPERPPKTSPGSPR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 AGLGS(0.002)PERPPKT(0.395)S(0.495)PGS(0.108)PR 62.684 0.017428 616690000.0 305600.0 293880.0 286880.0 257450.0 326310.0 316290.0 293990.0 301160.0 435610.0 288040.0 True False 288647.75880150334 279761.56367712683 305372.7438242293 281917.97059483494 351988.74055007164 314315.91678818164 323709.3782659024 300115.34625127225 356514.2048344766 285488.18969172897 1.0110672497982705 0.9799409354874338 1.0696510568579798 0.9874943369785308 1.2329362588699384 1.100976951542482 1.1338801041662872 1.0512355925312977 1.2487879278629415 1.0 18.123071538674303 -5.733472683717208 24.99933268628385 1.1294772161650686 1.0138608640361138 0.3754036240330736 0.07322753216026683 224.48429674697576 200664.74880371173 0.020290950788092114 0.026189855849427783 1.8472569801462827e-06 5.733472683717208 -0.11561635212895482 AGLLNTS(ph)GTK ddPTM_KYSE-520_SHP099_60min_R1 1 AGLLNTSGTK 10 0 A0A087WT26;H3BQD9;Q08AM6 A0A087WT26 VAC14 Protein VAC14 homolog 1 AGLLNT(0.018)S(0.972)GT(0.01)K 109.24 0.00073429 234700000.0 578060.0 564340.0 442760.0 430980.0 467340.0 488060.0 409580.0 466410.0 642840.0 517780.0 True False 545993.8594659584 537228.25930839 471301.01804104727 471940.2096211379 504116.9991991369 485013.83650333516 450984.343515591 464792.1325709127 526116.4606776582 513192.87202674436 1.0639155164210945 1.0468349982857772 0.918370156194387 0.9196156754035028 0.9823148891531477 0.9450907503603427 0.8787813862934725 0.9056870387449394 1.0251827126902113 1.0 18.969141606744603 -4.727350710121036 8.047127408205316 0.9413173468059541 1.056386985987235 0.5013821388839201 0.04299972379068885 0.17421219882050154 34.452096633474305 0.01100699061469476 0.028701862920359762 1.873480986392954e-05 4.727350710121036 0.11506963918128088 AGLQFPVGR ddPTM_KYSE-520_SHP099_60min_R1 2 AGLQFPVGR 9 0 A0A0U1RRH7;A0A0U1RR32;A0A3B3IS11;P20671;P04908;Q7L7L0;Q96QV6;P0C0S8;Q93077;Q9BTM1-2;Q96KK5;Q99878;Q16777;Q6FI13;Q9BTM1;Q8IUE6;Q71UI9-5;P16104;C9J0D1;A0A494C189;Q71UI9-2;Q71UI9;P0C0S5 A0A0U1RRH7;P16104;C9J0D1 HIST1H2AD;HIST1H2AB;HIST3H2A;HIST1H2AA;HIST1H2AG;HIST1H2AC;H2AFJ;HIST1H2AH;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST2H2AB;H2AFV;H2AFX;H2AFZ Histone H2A type 1-D;Histone H2A type 1-B/E;Histone H2A type 3;Histone H2A type 1-A;Histone H2A type 1;Histone H2A type 1-C;Histone H2A.J;Histone H2A type 1-H;Histone H2A type 1-J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 2-B;Histone H2A.V;Histone H2AX;Histone H2A;Histone H2A.Z 0 ; 194.25 2.8678000000000002e-05 4411800000.0 2413500.0 3080100.0 2503800.0 1935030.0 3111900.0 3228500.0 2614500.0 3011100.0 2989400.0 2823500.0 False True 2279618.3438070323 2932127.3726756424 2665198.954221645 2118934.669412016 3356788.825711037 3208349.73394873 2878799.1750610624 3000655.196896027 2446600.3166414513 2798485.9866497614 0.8145898727676327 1.0477548884158863 0.952371734908102 0.7571717991515555 1.199501745488336 1.146459102977193 1.0286987995632055 1.0722423521899762 0.8742585556307988 1.0 21.41621509281564 -5.7642154766906675 24.99968741020879 1.0605440766947494 0.9082708358307767 0.3371376494174606 0.10918667770433214 93.27675474162294 839990.3618193862 0.0341613204375097 0.04048125948561107 1.7210144759105448e-06 5.7642154766906675 -0.15227324086397265 AGLQMKS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 2 AGLQMKSPEK 10 1 Q9BRQ0 Q9BRQ0 PYGO2 Pygopus homolog 2 1 AGLQMKS(1)PEK;AGLQMKS(1)PEK 145.29 0.00011938 298680000.0 1031330.0 1039470.0 1013070.0 724530.0 807610.0 871520.0 752840.0 790720.0 1167720.0 909770.0 True False 974120.0689946158 989532.3009237201 1078374.1131693122 793389.1133621122 871164.3123276733 866080.5204060706 828944.4142103551 787977.176875436 955691.4838257035 901710.1455903506 1.080302881983055 1.0973951061356555 1.195921015686587 0.8798715609911204 0.9661245540908504 0.9604866094071136 0.9193025256110924 0.8738697027297463 1.0598655105516321 1.0 19.782304228623982 -5.263059565799687 24.995989440508737 0.9457643649955855 1.1218252134879438 0.6444532888587629 0.058833601586789554 84.74475697212402 1307438.2513099343 0.01587397512370229 0.02500089961126672 5.456830126289238e-06 5.263059565799687 0.17606084849235837 AGLQMKS(ph)PEKK ddPTM_KYSE-520_SHP099_60min_R1 2 AGLQMKSPEKK 11 2 Q9BRQ0 Q9BRQ0 PYGO2 Pygopus homolog 2 1 AGLQMKS(1)PEKK;AGLQMKS(1)PEKK 101.42 0.0010776 2226700000.0 1929120.0 2012480.0 2012630.0 1415470.0 1790560.0 1529660.0 1312210.0 1421710.0 2081990.0 1581710.0 True False 1822107.8679946207 1915797.4400059334 2142367.3501218576 1549995.8432234265 1931466.8851072183 1520112.8245414319 1444860.9927354692 1416778.4198396069 1703953.0986968398 1567697.2799517587 1.1622829810935762 1.222045521482876 1.3665695396165916 0.9887086384886266 1.2320407197278889 0.9696469107787243 0.9216454038753774 0.9037321413756642 1.0869146234337244 1.0 20.580215573371756 -6.028769925296115 1.287937857444526 0.9637204929097994 1.224588058658925 0.508478312468268 0.10280059707205556 0.3439135931823717 1.182352246244167 0.044659136135122096 0.04936749094262543 9.359013521008914e-07 6.028769925296115 0.2608675657491256 AGLQS(ph)LEASGR ddPTM_KYSE-520_SHP099_60min_R1 1 AGLQSLEASGR 11 0 O60784-4;O60784;O60784-2;O60784-3 O60784-4 TOM1 Target of Myb protein 1 1 AGLQS(1)LEASGR 133.98 8.3751e-05 0.0 174140.0 163740.0 143520.0 113760.0 116540.0 127650.0 107660.0 155270.0 168180.0 133660.0 True False 164480.10706051654 155873.6846212493 152771.52884011908 124571.71619680885 125711.03497810484 126853.28900063664 118543.32346034584 154731.40461029048 137642.75147279038 132475.8763859064 1.24158534782122 1.1766193881758846 1.1532026283418637 0.9403350979458895 0.9489352960527292 0.9575576509575904 0.8948295092989264 1.167996837096235 1.0390023846442256 1.0 17.015370145908786 -5.119849912533433 4.10935541086409 0.9926864713757545 1.200985961607488 0.6207314790881762 0.07149037522001642 0.16499164852520407 4.693544430221321 0.021457008258568642 0.039526617160559295 7.588397765229195e-06 5.119849912533433 0.20829949023173355 AGLQSLEAS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 1 AGLQSLEASGR 11 0 O60784-4;O60784;O60784-2;O60784-3 O60784-4 TOM1 Target of Myb protein 1 1 AGLQSLEAS(1)GR 111.63 0.00029579 289220000.0 165740.0 160200.0 169010.0 169850.0 157330.0 148340.0 166940.0 162170.0 193680.0 188130.0 True False 156546.0718055011 152503.75153489775 179904.65502556102 185992.49293273562 169710.97591475214 147414.15503607085 183815.92437739315 161607.4701207624 158512.5942754787 186463.3145629251 0.8395542692805241 0.8178753654163583 0.9648260058406783 0.9974749905562222 0.9101574554359881 0.7905799346193834 0.985802085564458 0.866698473635817 0.8501007002210401 1.0 17.50853229202611 -4.745226173593616 24.995020833063716 0.9159868540785618 0.82871475792175 0.2340592554900509 0.06612424498552398 377.77637969889497 582387.9303965974 0.017209146242812435 0.0452272254694569 1.797934335935774e-05 4.745226173593616 -0.08727209615681186 AGLS(ph)PAEPLLSR ddPTM_KYSE-520_SHP099_60min_R1 4 AGLSPAEPLLSR 12 0 O95402;B8ZZF3 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 AGLS(1)PAEPLLSR;AGLS(1)PAEPLLSR;AGLS(1)PAEPLLSR;AGLS(1)PAEPLLSR 159.58 3.9118e-06 822550000.0 992550.0 1220270.0 952010.0 759470.0 842620.0 1090110.0 861290.0 1097800.0 1292990.0 1138050.0 True False 937491.2729006285 1161646.397537389 1013378.0878698563 831649.8004570184 908929.4001480235 1083306.219134228 948357.5985803583 1093991.9880284471 1058215.6096254212 1127967.7623895027 0.831133037804763 1.0298577993723341 0.8984105057427367 0.7372992634960062 0.8058115049516439 0.9604053016899499 0.8407665805726081 0.9698787718107468 0.9381612178203413 1.0 20.10529440505254 -7.27372211817216 23.922198276501355 0.9655150188151358 0.874724475733524 0.24642626433034098 0.07785442053767082 748.8321044929972 1458432.7769951911 0.044939790513391115 0.021865594535171517 5.3244883584980975e-08 7.27372211817216 -0.09079054308161183 AGLS(ph)PANCQSDR ddPTM_KYSE-520_SHP099_60min_R1 2 AGLSPANCQSDR 12 0 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 AGLS(1)PANCQSDR;AGLS(1)PANCQSDR 195.58 5.8483e-08 502600000.0 601740.0 514010.0 529790.0 489470.0 507930.0 516240.0 491250.0 552880.0 617350.0 555200.0 True False 568360.2826610495 489316.18805526075 563941.1110939718 535989.081635478 547901.201273629 513017.9546704951 540910.3441379797 550962.1883231619 505254.80212704896 550281.3599390639 1.0328539616969536 0.8892109085967328 1.0248232125406183 0.9740273261206438 0.9956746514806561 0.9322829956066562 0.9829705011230583 1.001237236864017 0.9181753897369865 1.0 19.06980993452525 AGLS(ph)PANCQSDRVNLEK ddPTM_KYSE-520_SHP099_60min_R1 1 AGLSPANCQSDRVNLEK 17 1 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 AGLS(1)PANCQSDRVNLEK 134.87 1.0035e-05 285840000.0 195950.0 234720.0 225120.0 143850.0 137090.0 125090.0 100010.0 106930.0 256650.0 153870.0 True False 185080.2628833595 223443.6988780973 239631.59540473548 157521.46074992052 147878.2030645992 124309.26691022042 110119.98680354073 106559.08478764974 210048.82962000012 152506.8315090484 1.213586703310261 1.4651389492990687 1.5712843354857704 1.0328813417159912 0.9696496976650216 0.8151062197029844 0.7220659278925953 0.6987167967051199 1.3773076756075526 1.0 17.2185143437581 -5.420333653995128 4.100857570059237 0.9052014891318025 1.4190810648939378 0.5456146782922364 0.19767445951265564 0.16858916167111446 4.920395745618904 0.05805158841033872 0.08743811540888129 3.7989742163339855e-06 5.420333653995128 0.5138795757621353 AGLVGPEFHEK ddPTM_KYSE-520_SHP099_60min_R1 3 AGLVGPEFHEK 11 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;; 187.42 1.606e-06 997810000.0 2460200.0 2427480.0 1826950.0 1505200.0 2490590.0 2355670.0 1807000.0 2102170.0 2203810.0 2103070.0 False True 2323727.801712889 2310860.2170782355 1944718.120223355 1648253.7554451176 2686585.2634813627 2340967.3897385816 1989669.1946205206 2094878.0629201643 1803653.657529135 2084438.4359637 1.1147980010446115 1.108624834971369 0.9329698045623745 0.7907423539151345 1.288877242488225 1.1230686161552574 0.9545348810940705 1.0050083642559766 0.8652947606462891 1.0 20.99122733199987 -6.7913318002427765 24.066447326641377 0.9566267215473205 1.0544753043118307 0.13567768608269049 0.12771331258329546 340.0880375760345 273801.16587926814 0.05716229889498316 0.03854634128846148 1.6168442993676553e-07 6.7913318002427765 0.09784858276451014 AGMSSNQS(ph)IS(ph)SPVLDAVPR ddPTM_KYSE-520_SHP099_60min_R1 9 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMSSNQS(0.964)IS(0.848)S(0.187)PVLDAVPR;AGMS(0.001)S(0.012)NQS(0.987)IS(0.575)S(0.425)PVLDAVPR;AGMS(0.004)S(0.031)NQS(0.958)IS(0.777)S(0.23)PVLDAVPR;AGMSSNQS(1)IS(0.889)S(0.112)PVLDAVPR;AGMS(0.008)S(0.038)NQS(0.948)IS(0.653)S(0.353)PVLDAVPR;AGMSSNQS(0.732)IS(0.773)S(0.495)PVLDAVPR;AGMSSNQS(0.999)IS(0.812)S(0.19)PVLDAVPR;AGMSSNQS(0.999)IS(0.824)S(0.177)PVLDAVPR;AGMS(0.011)S(0.012)NQS(0.923)IS(0.642)S(0.411)PVLDAVPR 233.89 6.1426e-26 5629149000.0 5822900.0 5314360.0 5034710.0 5126080.0 5069520.0 5247970.0 5137200.0 5439630.0 6114030.0 5737620.0 True False 5499892.12933663 5059050.16858301 5359255.462420823 5613261.101987855 5468462.382376884 5215215.472594367 5656518.310240475 5420761.193149192 5003876.274153788 5686789.150600812 0.9671348776410258 0.8896145143782092 0.942404460670854 0.9870703754498812 0.9616080775210627 0.9170755824564688 0.9946769891482369 0.9532200068603714 0.8799123972488281 1.0 22.43918288372127 -4.995010076169763 24.939692811218592 0.9552594544916204 0.9252833929989016 0.07705488969777319 0.03843287693058233 328.15269572463643 1640064.984322405 0.009797198696679292 0.020280244940510513 1.0115559846361943e-05 4.995010076169763 -0.02997606149271881 AGMSSNQS(ph)ISS(ph)PVLDAVPR ddPTM_KYSE-520_SHP099_60min_R1 3 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMSSNQS(0.986)IS(0.179)S(0.834)PVLDAVPR;AGMSSNQS(0.997)IS(0.263)S(0.74)PVLDAVPR;AGMSSNQS(0.998)IS(0.002)S(1)PVLDAVPR 219.95 1.015e-18 3170970000.0 2153440.0 1990500.0 2044730.0 1984270.0 2115760.0 1941980.0 1894780.0 2006660.0 2303860.0 2114600.0 True False 2033984.390423789 1894873.3921985868 2176536.5674836747 2172854.424207471 2282258.274972326 1929859.3824790968 2086322.853670763 1999699.3648179632 1885537.0995843923 2095866.2891339061 0.9704743098207428 0.9041003245400844 1.0384901836381484 1.0367333238158907 1.0889331475031474 0.9207931786891759 0.9954465437453613 0.954115906718609 0.8996457022855069 1.0 20.999115248911043 -6.340359974815998 24.999981814639444 0.9537229575219339 1.0053163235175735 0.20189200283139563 0.05331917111542119 211.60831116130763 67029.93991428096 0.02013961514762517 0.017761471479400284 4.5670947869131746e-07 6.340359974815998 0.05159336599563957 AGMSSNQS(ph)ISSPVLDAVPR ddPTM_KYSE-520_SHP099_60min_R1 2 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMS(0.054)S(0.042)NQS(0.855)IS(0.024)S(0.024)PVLDAVPR;AGMS(0.056)S(0.034)NQS(0.559)IS(0.176)S(0.176)PVLDAVPR 93.81200000000001 0.022975 473630000.0 676880.0 802760.0 716750.0 556110.0 525090.0 740870.0 558480.0 753240.0 884650.0 830390.0 True False 639332.1170731725 764194.204632675 762952.8518405472 608962.5271994318 566411.5956465844 736245.9555182279 614936.6086395509 750627.1862475382 724019.860211702 823033.3906336431 0.7767997317593137 0.9285093573716754 0.9270010919643968 0.7399001475876928 0.6882000196984853 0.8945517446763628 0.7471587612819922 0.9120251921609641 0.8796968245167891 1.0 19.650591436705064 -7.9852632179471925 1.2561091518155754 0.9960517632400099 0.8198515341785112 0.3194034109126258 0.08063707285794416 0.611394046713372 2.1752935185121918 0.08035824500314598 0.02495370824460713 1.034514976016652e-08 7.9852632179471925 -0.17620022906149868 AGMSSNQSIS(ph)SPVLDAVPR ddPTM_KYSE-520_SHP099_60min_R1 5 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQS(0.002)IS(0.723)S(0.275)PVLDAVPR;AGMSSNQS(0.067)IS(0.651)S(0.281)PVLDAVPR;AGMSSNQS(0.001)IS(0.712)S(0.287)PVLDAVPR;AGMSSNQS(0.001)IS(0.5)S(0.5)PVLDAVPR;AGMSSNQSIS(0.5)S(0.5)PVLDAVPR 246.12 2.7259e-26 13254570000.0 4774540.0 6171590.0 4519670.0 3713760.0 3989790.0 5668330.0 3954420.0 5422430.0 5706270.0 5727800.0 True False 4509686.748390481 5875097.552654548 4811015.159927683 4066714.633817339 4303763.774200212 5632951.849909741 4354171.365020073 5403620.855934676 4670155.211360683 5677056.148160964 0.7943706439914914 1.034884524536143 0.8474489302851393 0.7163421547512292 0.758097799612988 0.9922311322805024 0.7669769773953303 0.9518350206356748 0.8226367838326808 1.0 22.436711579788962 -9.57422979074823 0.5529330768430887 1.023807025238785 0.8518767394952738 0.15808950417589684 0.1008976686519079 23.017578981111917 5.579612508101582 1.1554449204238624 0.045405269553949024 2.665447968837394e-10 9.57422979074823 -0.1719302857435112 AGMSSNQSIS(ph)SPVLDAVPRT(ph)PSRER ddPTM_KYSE-520_SHP099_60min_R1 1 AGMSSNQSISSPVLDAVPRTPSRER 25 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMS(0.07)S(0.078)NQS(0.358)IS(0.455)S(0.038)PVLDAVPRT(0.616)PS(0.385)RER 72.152 0.055059000000000004 738660000.0 587150.0 633120.0 539960.0 431510.0 488500.0 466960.0 428760.0 398610.0 663820.0 429510.0 True False 554579.6190454937 602703.9648675056 574766.6855665458 472520.58066178754 526942.1708152067 464045.52942998265 472103.2450943518 397227.3149462732 543287.0215404191 425704.8755537237 1.3027325992546825 1.4157788634286963 1.350152931227142 1.109972207969593 1.2378109837943514 1.0900639294449903 1.1089918678527624 0.9331049225818494 1.2762057771449145 1.0 18.69949408768751 -5.451795536145641 1.0218370085948305 1.0798762138916946 1.385011693502798 0.5573875023777808 0.09946823270168931 0.4142851396987715 0.864520467239472 0.039173905935039464 0.08896206036674004 3.5334948595918493e-06 5.451795536145641 0.30513547961110343 AGMSSNQSIS(ph)SPVLDAVPRTPS(ph)RER ddPTM_KYSE-520_SHP099_60min_R1 1 AGMSSNQSISSPVLDAVPRTPSRER 25 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMS(0.076)S(0.084)NQS(0.317)IS(0.475)S(0.036)PVLDAVPRT(0.079)PS(0.932)RER 64.39699999999999 0.02228 825610000.0 988980.0 1127000.0 1083700.0 815280.0 898920.0 923270.0 793050.0 813550.0 1339800.0 846370.0 True False 934119.3079172485 1072857.2283385124 1153557.0359813077 892763.9660771302 969659.8898448427 917507.5294603836 873219.2334221369 810727.984933997 1096526.0936094944 838871.8202658963 1.113542361717624 1.2789286782794183 1.3751290818371584 1.06424360016546 1.1559094803512302 1.0937398387867674 1.0409447693037936 0.9664503745959919 1.3071437937466177 1.0 19.678090857933565 -5.282763153427709 24.856748306728313 1.0892641579218487 1.2581729141118845 0.3388990566428942 0.10628867752873171 799.3110038686228 931741.2477320047 0.029413939149441598 0.043674934808197056 5.214790270532107e-06 5.282763153427709 0.16890875619003576 AGMSSNQSISS(ph)PVLDAVPR ddPTM_KYSE-520_SHP099_60min_R1 17 AGMSSNQSISSPVLDAVPR 19 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AGMSSNQS(0.003)IS(0.152)S(0.845)PVLDAVPR;AGMSSNQS(0.001)IS(0.224)S(0.775)PVLDAVPR;AGMSSNQS(0.001)IS(0.057)S(0.942)PVLDAVPR;AGMSSNQS(0.007)IS(0.121)S(0.872)PVLDAVPR;AGMSSNQS(0.008)IS(0.12)S(0.872)PVLDAVPR;AGMSSNQSIS(0.12)S(0.88)PVLDAVPR;AGMSS(0.001)NQS(0.086)IS(0.041)S(0.872)PVLDAVPR;AGMSSNQS(0.014)IS(0.106)S(0.881)PVLDAVPR;AGMSSNQSIS(0.003)S(0.997)PVLDAVPR;AGMSSNQS(0.001)IS(0.03)S(0.969)PVLDAVPR;AGMSSNQS(0.002)IS(0.217)S(0.781)PVLDAVPR;AGMSSNQSIS(0.051)S(0.949)PVLDAVPR;AGMSSNQS(0.001)IS(0.031)S(0.968)PVLDAVPR;AGMSSNQSIS(0.005)S(0.995)PVLDAVPR;AGMSSNQSIS(0.033)S(0.967)PVLDAVPR;AGMSSNQSIS(0.019)S(0.981)PVLDAVPR;AGMSSNQS(0.001)IS(0.069)S(0.93)PVLDAVPR 276.3 6.156499999999999e-30 67444220000.0 15346700.0 19864410.0 13709270.0 11289030.0 11687930.0 18686030.0 13129700.0 17065560.0 18811210.0 19172720.0 True False 14495387.95811203 18910093.926512722 14592991.47980756 12361936.017029354 12607703.595775183 18569403.5555391 14456978.209523527 17006363.55549165 15395568.45601422 19002864.61695043 0.7628001488355729 0.9951180681277413 0.7679364019038849 0.650530131441477 0.6634633172374019 0.9771896990191319 0.7607788878645169 0.8949368370662434 0.8101709277179965 1.0 24.179713580512622 -6.264039478150362 24.997170490965804 0.8740590431315991 0.7740627139883697 0.22598383636729535 0.10971299315311009 471.5736338589305 4533650.113728742 0.03992451544385954 0.03680644407783302 5.4445315882047e-07 6.264039478150362 -0.09999632914322942 AGMSSNQSISS(ph)PVLDAVPRT(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 4 AGMSSNQSISSPVLDAVPRTPSR 23 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AGMS(0.003)S(0.003)NQS(0.01)IS(0.376)S(0.609)PVLDAVPRT(0.842)PS(0.158)R;AGMSSNQSIS(0.001)S(0.999)PVLDAVPRT(0.969)PS(0.031)R;AGMSSNQSIS(0.341)S(0.659)PVLDAVPRT(0.887)PS(0.113)R;AGMS(0.044)S(0.049)NQS(0.054)IS(0.386)S(0.467)PVLDAVPRT(0.994)PS(0.006)R 168.59 1.5063e-10 5480660000.0 1459500.0 1830770.0 1742160.0 1207680.0 1178480.0 1304660.0 1057280.0 1033870.0 2100310.0 1275330.0 True False 1378538.6255588804 1742817.0611582065 1854462.421154558 1322457.5440977681 1271219.6713660276 1296517.1330009466 1164160.180458428 1030283.7462770713 1718946.6485064602 1264031.5683917257 1.090588763786055 1.3787765311713358 1.4671013505731185 1.0462219276535791 1.0056866483037663 1.0256999630559493 0.9209897992813838 0.8150775439793324 1.3598921826719406 1.0 20.26960106368846 -5.371425419698423 6.3491419638690925 1.0092547941376009 1.3175306307171748 0.4113879143760233 0.15712550618480417 0.21619424133325812 10.81595301215752 0.04385692506540161 0.06538446481396756 4.251817159247425e-06 5.371425419698423 0.3082758365795739 AGNALT(ph)PELAPVQIK ddPTM_KYSE-520_SHP099_60min_R1 2 AGNALTPELAPVQIK 15 0 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 AGNALT(1)PELAPVQIK;AGNALT(1)PELAPVQIK 214.46 1.8824000000000001e-13 992660000.0 955250.0 1315940.0 921750.0 801740.0 867110.0 1256640.0 886310.0 1246680.0 1309570.0 1195920.0 True False 902260.3782563362 1252720.2671337908 981167.479852145 877937.1285480785 935346.6238189831 1248796.8436330613 975906.8643520273 1242355.5580573 1071785.0995732085 1185325.0792116807 0.7611923463699923 1.0568579785445291 0.8277623557114695 0.7406720265566005 0.7891055713096446 1.0535479806633243 0.8233242352393908 1.0481137873869575 0.9042119485787108 1.0 20.176851346464314 -6.248794109160641 24.821797057269247 0.9599394963681455 0.841781289422157 0.2856222989755941 0.10288746453753256 1069.1508787919581 2098671.1742848684 0.03432841418684148 0.034105544989769886 5.639049291791348e-07 6.248794109160641 -0.11815820694598844 AGNS(ph)DS(ph)EEDDANGR ddPTM_KYSE-520_SHP099_60min_R1 4 AGNSDSEEDDANGR 14 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 2 AGNS(1)DS(1)EEDDANGR;AGNS(1)DS(1)EEDDANGR;AGNS(1)DS(1)EEDDANGR;AGNS(1)DS(1)EEDDANGR 241.11 8.498100000000001e-19 677082000.0 1275060.0 1167340.0 1114460.0 1125400.0 1176820.0 1154660.0 1145200.0 1207440.0 1350680.0 1151840.0 True False 1204329.8800309072 1111259.2341869369 1186299.874799047 1232357.6776361535 1269429.0388101358 1147453.338640619 1260967.9920749413 1203251.6724586156 1105430.559871974 1141635.5937179585 1.0549161980039292 0.9733922455657719 1.0391230628467272 1.079466761913704 1.111938910975956 1.0050959736667933 1.1045275734337903 1.0539717569071163 0.9682866984480785 1.0 20.122670790049256 -4.987475344686177 24.37881618856425 1.0524610442617852 1.012180061376597 0.05535924200313569 0.047320116998515974 381.72504957616707 742999.0960058424 0.012142031098332727 0.025244659521691637 1.0292589575529625e-05 4.987475344686177 -0.04028098288518822 AGNS(ph)DS(ph)EEDDANGRVELILEPK ddPTM_KYSE-520_SHP099_60min_R1 4 AGNSDSEEDDANGRVELILEPK 22 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 2 AGNS(1)DS(1)EEDDANGRVELILEPK;AGNS(1)DS(1)EEDDANGRVELILEPK;AGNS(1)DS(1)EEDDANGRVELILEPK;AGNS(1)DS(1)EEDDANGRVELILEPK 161.24 1.3519e-09 796665000.0 1116127.0 1118939.0 1143154.0 876216.0 1045148.0 981748.0 908415.0 978309.0 1458821.0 1016177.0 True False 1054213.2103659878 1065183.4908783203 1216843.535951069 959491.3051960545 1127395.2015213335 975620.5465710702 1000246.4534760368 974915.4744180379 1193935.8802847406 1007174.4623537421 1.0467036742594895 1.057595809557177 1.208175526122193 0.9526565069508879 1.1193643640314692 0.9686708539959094 0.9931213417966192 0.9679708043229018 1.185431049844673 1.0 19.941882177367948 -5.279816862029426 24.996719922895544 1.0254488453319333 1.0995021103159746 0.16287639311427016 0.08017921584428354 1495.8078913280197 2034567.6788996598 0.022013818915661097 0.03273779818515005 5.250288133750703e-06 5.279816862029426 0.0740532649840413 AGNWPGS(ph)PQVS(ph)GPSPAAR ddPTM_KYSE-520_SHP099_60min_R1 1 AGNWPGSPQVSGPSPAAR 18 0 O60244;H7C3E5 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 2 AGNWPGS(0.999)PQVS(0.719)GPS(0.282)PAAR 52.298 0.047102 0.0 115940.0 126560.0 125230.0 134380.0 128360.0 118850.0 106990.0 121150.0 160980.0 127050.0 True False 109508.57707933999 120479.86762956715 133302.52617508438 147151.4347971797 138461.2017315044 118108.21306483091 117805.5933217759 120729.7589266227 131750.0899755608 125924.43584340431 0.8696372260545319 0.9567632113864869 1.0585914106524585 1.1685693393153067 1.0995578483566957 0.937929261098351 0.9355260758783566 0.9587476657569342 1.046263094951651 1.0 16.942198742000343 -9.304887632290582 14.170677086928418 0.9999999995836494 1.0061894180234383 0.0 0.08510563957481716 0.0 0.0 0.0915918129628393 0.022214277605153137 4.955783982959563e-10 9.304887632290582 0.00618941843978893 AGPDLPSLPSHALEDEGWAAAAPS(ph)PGS(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 4 AGPDLPSLPSHALEDEGWAAAAPSPGSAR 29 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 2 AGPDLPSLPSHALEDEGWAAAAPS(1)PGS(1)AR;AGPDLPSLPSHALEDEGWAAAAPS(1)PGS(1)AR;AGPDLPSLPSHALEDEGWAAAAPS(1)PGS(1)AR;AGPDLPSLPSHALEDEGWAAAAPS(1)PGS(1)AR 168.52 2.5037e-10 1117320000.0 492377.0 511971.0 523974.0 561212.0 452483.0 432037.0 409139.0 467262.0 616448.0 434124.0 True False 465063.8662807845 487375.14467586135 557750.2024280421 614549.4197454599 488090.83782390325 429340.4968270118 450498.76293184515 465641.177181771 504516.58258947945 430277.99910336075 1.0808450984012954 1.1326982687738696 1.2962554524988859 1.4282613125144559 1.1343615960867541 0.9978211707819071 1.0469946496697986 1.0821868144597264 1.1725363221936087 1.0 18.71490954898764 -5.9931744935988425 24.95625410607751 1.064443378475903 1.2378598253213604 0.4125637145588408 0.09811737500093383 182.93362177606576 668858.0180228885 0.033022102918668195 0.03736024993574648 1.015840460024709e-06 5.9931744935988425 0.17341644684545732 AGPDLPSLPSHALEDEGWAAAAPS(ph)PGSAR ddPTM_KYSE-520_SHP099_60min_R1 9 AGPDLPSLPSHALEDEGWAAAAPSPGSAR 29 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 AGPDLPSLPSHALEDEGWAAAAPS(0.946)PGS(0.054)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.971)PGS(0.029)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.999)PGS(0.001)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.998)PGS(0.002)AR;AGPDLPSLPSHALEDEGWAAAAPS(1)PGSAR;AGPDLPSLPSHALEDEGWAAAAPS(0.975)PGS(0.025)AR;AGPDLPSLPSHALEDEGWAAAAPS(0.997)PGS(0.003)AR;AGPDLPSLPSHALEDEGWAAAAPS(1)PGSAR;AGPDLPSLPSHALEDEGWAAAAPS(0.59)PGS(0.41)AR 385.19 4.0891999999999988e-109 11155920000.0 2924280.0 3878890.0 2844790.0 3002770.0 2446098.0 3184520.0 2328850.0 2886410.0 3720180.0 3147950.0 True False 2762064.3589923433 3692542.3020674083 3028169.715224934 3288152.3579842765 2638591.996206211 3164644.2294422877 2564272.88538572 2876397.717403157 3044689.090106106 3120061.6120680394 0.8852595565129214 1.1834837773026916 0.9705480505616689 1.053874175197721 0.8456858627407999 1.0142890182686803 0.8218661052933722 0.921904140058511 0.9758426174437065 1.0 21.573143087689704 -5.740933144873361 24.997056341136176 0.9248411082338523 1.0309663490846133 0.20061385328380854 0.09044123446147054 337.7504137144505 411715.27949783456 0.02504629500476354 0.03229668011383518 1.8157951640733243e-06 5.740933144873361 0.10612524085076092 AGPDLPSLPSHALEDEGWAAAAPSPGS(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 1 AGPDLPSLPSHALEDEGWAAAAPSPGSAR 29 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 AGPDLPSLPSHALEDEGWAAAAPS(0.196)PGS(0.804)AR 143.48 1.1444e-06 535460000.0 175690.0 187300.0 137320.0 179260.0 139490.0 163620.0 162030.0 158150.0 174660.0 161160.0 True False 165944.12547066816 178301.82685696852 146171.86691976848 196296.81650351564 150467.0694104672 162598.78688824267 178409.57366041114 157601.41456248742 142946.14682029697 159732.24778058252 1.0388893149404537 1.1162544153381868 0.9151055528909768 1.228911626994446 0.9419955675898175 1.0179459010155407 1.1169289616802043 0.9866599684928861 0.8949110076799025 1.0 17.285296077208223 -7.514177567896092 22.624907639289628 0.9452320934390801 1.051853443944761 0.19910591242744125 0.08794894677714794 177.99725760500093 462855.31766792334 0.050822744824147864 0.021369835146947305 3.060711759328423e-08 7.514177567896092 0.106621350505681 AGPGSS(ph)PLFSLLPGYR ddPTM_KYSE-520_SHP099_60min_R1 4 AGPGSSPLFSLLPGYR 16 0 Q9H0W8-2;Q9H0W8 Q9H0W8-2 SMG9 Protein SMG9 1 AGPGS(0.18)S(0.813)PLFS(0.007)LLPGYR;AGPGS(0.238)S(0.762)PLFSLLPGYR;AGPGS(0.123)S(0.877)PLFSLLPGYR;AGPGS(0.001)S(0.999)PLFSLLPGYR 283.1 3.1776e-37 2085510000.0 1430643.0 1940940.0 1431656.0 1142625.0 1405573.0 1785580.0 1351988.0 1540570.0 1788980.0 1661030.0 True False 1351282.380873885 1847694.3289896653 1523942.8364905918 1251219.7364572666 1516183.598483607 1774435.5328927275 1488660.1411713378 1535226.1222417417 1464146.3285158307 1646314.5664617855 0.8207923372615383 1.1223215578786256 0.9256692903870785 0.7600125528539506 0.9209561947460305 1.077822895478776 0.9042379697646276 0.9325229537033181 0.8893478551079909 1.0 20.65080859166631 -4.9510948398265215 24.99998935640818 0.9221499742348442 0.9846664825484674 0.026275587569076553 0.10192778154400069 348.60707982957615 178201.7054325673 0.026666551145217002 0.05551093136074279 1.1191934509272474e-05 4.9510948398265215 0.06251650831362321 AGPLS(ph)GKK ddPTM_KYSE-520_SHP099_60min_R1 1 AGPLSGKK 8 1 P17844-2;P17844;J3KTA4;J3QR02;J3KRX8;J3QRQ7;X6RLV5;J3KTQ4;J3QKN9 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 AGPLS(1)GKK 65.627 0.029802999999999996 327390000.0 358620.0 376140.0 308290.0 235720.0 311380.0 339310.0 328480.0 344770.0 403520.0 336300.0 True False 338726.63370875386 358069.6698023493 328162.8666814403 258122.75792819797 335883.8344901511 337192.2404293464 361685.9640558649 343574.073339923 330250.9399114069 333320.64363744116 1.016218587640773 1.0742499051208725 0.9845260800539823 0.7743977544006027 1.0076898653042863 1.0116152325570222 1.0850992009042117 1.0307614601681696 0.9907905382260895 1.0 18.346551145473573 -5.985163879747745 24.99521143202896 1.0272203312202213 0.9618150721274454 0.12862685638455074 0.0754430073234848 528.4791282322468 890352.6095062031 0.025546847436352972 0.028956153734634782 1.0347516325098119e-06 5.985163879747745 -0.06540525909277584 AGPLT(ph)PPKPPR ddPTM_KYSE-520_SHP099_60min_R1 3 AGPLTPPKPPR 11 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 AGPLT(1)PPKPPR;AGPLT(1)PPKPPR;AGPLT(1)PPKPPR 92.85600000000001 0.0070971 8620700000.0 3796500.0 4471700.0 3250170.0 3060350.0 3296840.0 4386600.0 3099360.0 4036900.0 4869200.0 4527800.0 True False 3585900.5768648777 4256872.81984146 3459681.158655865 3351204.743872222 3556282.5515463757 4359221.602273352 3412673.555638652 4022896.9361195425 3985076.022543178 4487687.214575099 0.7990531437259262 0.9485671831173973 0.7709274272546273 0.7467554184677105 0.7924533020029316 0.9713737597654943 0.7604526323837766 0.8964298855441593 0.8880021784050498 1.0 22.097540694979685 -8.245380598254048 0.6795418951493731 1.0021294619194723 0.8252859480652273 0.3387186564811805 0.07311361425871418 1.2962200642586683 1.2503766197408845 0.07758177492999711 0.029300534115523302 5.683546293430949e-09 8.245380598254048 -0.17684351385424502 AGQDMGLEHGFEKPLDS(ph)AMSAEEDTDVR ddPTM_KYSE-520_SHP099_60min_R1 1 AGQDMGLEHGFEKPLDSAMSAEEDTDVR 28 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 AGQDMGLEHGFEKPLDS(0.847)AMS(0.153)AEEDTDVR 104.52 0.0010883 317430000.0 215240.0 253900.0 199370.0 199750.0 229650.0 222020.0 260890.0 266460.0 302260.0 278840.0 True False 203300.20812969748 241702.26288833038 212221.7092032789 218734.17994297258 247722.14847023963 220634.29082586287 287263.30724103306 265535.71245223173 247377.20335453426 276369.6945342374 0.7356096277933691 0.8745613852331688 0.767890667466032 0.7914550121409033 0.8963433884736273 0.7983302626494387 1.0394168135010409 0.9607989504773161 0.895095259165214 1.0 18.07623989934448 -6.749260093415586 24.99999922491807 0.9705610027924997 0.8146736792882642 0.6734581805665185 0.055588346806856405 136.11104712350976 279390.69635467674 0.021061053270212366 0.016189429567628644 1.781311643155813e-07 6.749260093415586 -0.1558873235042355 AGQDMGLEHGFEKPLDSAMS(ph)AEEDTDVR ddPTM_KYSE-520_SHP099_60min_R1 5 AGQDMGLEHGFEKPLDSAMSAEEDTDVR 28 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 AGQDMGLEHGFEKPLDSAMS(1)AEEDTDVR;AGQDMGLEHGFEKPLDS(0.008)AMS(0.992)AEEDTDVR;AGQDMGLEHGFEKPLDS(0.058)AMS(0.942)AEEDTDVR;AGQDMGLEHGFEKPLDS(0.002)AMS(0.997)AEEDT(0.001)DVR;AGQDMGLEHGFEKPLDS(0.014)AMS(0.986)AEEDTDVR 277.79 7.160199999999999e-42 2509820000.0 1074124.0 1149663.0 890892.0 1007654.0 1016947.0 1053478.0 1098641.0 1170779.0 1237347.0 1239880.0 True False 1014540.2005068911 1094431.4638006568 948320.3237975994 1103421.1331977781 1096974.9432630728 1046902.8530341778 1209702.3539828884 1166717.8409108715 1012675.9757795383 1228895.6278120424 0.8255706811433651 0.8905812983883838 0.7716850010167369 0.8978965407846212 0.8926510262032223 0.8519054257668007 0.9843816892217884 0.9494035250073485 0.8240536892319593 1.0 20.228930959703437 -6.050300586174438 0.9793707644519473 0.9313135536954589 0.8374524165932467 0.3160877255587279 0.057618112818872635 0.7021178418740999 1.4527409394475883 0.030113725171249703 0.03410465359409253 8.90634294282354e-07 6.050300586174438 -0.09386113710221222 AGQEHLLR ddPTM_KYSE-520_SHP099_60min_R1 2 AGQEHLLR 8 0 A0A087X226;Q16222-2;Q3KQV9;Q16222-3;Q16222 A0A087X226 UAP1L1;UAP1 UDP-N-acetylhexosamine pyrophosphorylase;UDP-N-acetylgalactosamine pyrophosphorylase;UDP-N-acetylglucosamine pyrophosphorylase;UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 0 ; 90.76100000000001 0.0072766 1039370000.0 1305730.0 1086680.0 741400.0 629750.0 1106120.0 1198010.0 839640.0 893950.0 863620.0 1159380.0 False True 1233298.553991777 1034474.261660067 789191.8302819423 689601.2506587579 1193165.3510381088 1190532.7752107547 924519.0052967186 890849.0960994995 706808.3780885437 1149108.7951839915 1.0732652636204958 0.9002404872329172 0.6867859976266038 0.6001183295689084 1.038339760376704 1.0360487885919718 0.8045530668387997 0.775252177890484 0.6150926535858354 1.0 20.13208396508187 -4.365605062430634 3.649949747545574 0.8176210717930862 1.078067549426775 0.19721826309581092 0.15435415397774183 0.41528433336254295 8.938272151640781 0.041634632822720105 0.2361762173020119 4.309182997137821e-05 4.365605062430634 0.2604464776336889 AGQHS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 10 AGQHSPLR 8 0 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 AGQHS(1)PLR;AGQHS(1)PLR;AGQHS(1)PLR;AGQHS(1)PLR;AGQHS(1)PLR;AGQHS(1)PLR;AGQHS(1)PLR;AGQHS(1)PLR;AGQHS(1)PLR;AGQHS(1)PLR 107.51 0.0014399 14028880000.0 6506930.0 5313740.0 4924850.0 5173466.0 5290805.0 5691125.0 5416343.0 5651700.0 6145980.0 5210992.0 True False 6145977.621656626 5058459.95431365 5242313.711038601 5665150.653180734 5707161.252937464 5655604.577859368 5963879.808853616 5632095.571816691 5030024.959547749 5164826.664970427 1.1899678382898484 0.9794055604269952 1.0150028357376863 1.0968713996935602 1.1050053802667437 1.0950231139831972 1.1547105441703656 1.0904713627691396 0.9739000523798895 1.0 22.300288501418617 -7.757939463609174 24.988678382370875 0.9869499986333016 1.0875131068459805 0.34392085363805047 0.05723352524629649 99.85145814442949 712958.9331705419 0.04373266804275523 0.015034260290714608 1.7460655203651502e-08 7.757939463609174 0.10056310821267889 AGQTQPNPGILPIQPALT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 AGQTQPNPGILPIQPALTPR 20 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR;AGQTQPNPGILPIQPALT(1)PR 175.85 1.4432e-08 2655550000.0 826020.0 1227010.0 906070.0 759220.0 748090.0 1060050.0 740340.0 872240.0 1015300.0 1024390.0 True False 780199.0239699527 1168062.5978204415 964476.7219632585 831376.0405321837 806960.4269501498 1053433.8347444185 815180.7922221108 869214.4030223464 830947.1136301821 1015314.7015633602 0.7684307365673113 1.1504438929347554 0.9499288451927048 0.8188358144051775 0.7947884785944783 1.0375441556419536 0.8028848503492686 0.8561034344168842 0.8184133573075494 1.0 19.953495536158254 -5.016106579924404 24.180211229272107 0.8709921332656411 0.9821245276888697 0.08553724669032337 0.11598755645419902 828.3590330046057 1243592.0485012508 0.029786094040368364 0.05362651876991712 9.63592519995738e-06 5.016106579924404 0.11113239442322864 AGQVVTIWAAGAGATHS(ph)PPTDLVWK ddPTM_KYSE-520_SHP099_60min_R1 2 AGQVVTIWAAGAGATHSPPTDLVWK 25 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 AGQVVTIWAAGAGATHS(0.996)PPT(0.004)DLVWK;AGQVVTIWAAGAGATHS(0.822)PPT(0.178)DLVWK 185.38 2.9752e-15 586430000.0 487320.0 550790.0 490610.0 422030.0 453590.0 515840.0 368440.0 447830.0 624460.0 361362.0 True False 460287.38815166405 524329.2216473543 522235.5056037542 462139.6043120538 489284.952425935 512620.4512188674 405685.51082788245 446276.5822543081 511073.8053555639 358160.61381538166 1.2851423925382397 1.4639499750177063 1.45810422882776 1.2903138605582953 1.3661048522720676 1.4312585790996661 1.1326915779661861 1.24602361354101 1.4269402766296442 1.0 18.450247170282665 -13.244960675756452 0.1684862198562977 1.3766462216205452e-12 1.432656898133746 0.5178411118117461 0.10057645732970123 80.47805078695956 0.9528927135541074 27.513614950875553 0.3901474346725235 5.689044413394101e-14 13.244960675756452 1.4326568981323693 AGRGS(ph)LPPT(ph)LGPR ddPTM_KYSE-520_SHP099_60min_R1 1 AGRGSLPPTLGPR 13 1 C9JF41;Q96HZ4-2 C9JF41 HES6 2 AGRGS(1)LPPT(1)LGPR 71.513 0.032656 249300000.0 291600.0 325100.0 237850.0 254120.0 289080.0 240820.0 212120.0 233960.0 223630.0 108900.0 True False 275424.36670981185 309481.7080149518 253182.1915734555 278271.48839603603 311828.9513597951 239316.95305235652 233563.1596917012 233148.44736667452 183024.42925353872 107935.230722918 2.5517559453489054 2.86729092940401 2.345686296102919 2.5781340025148096 2.88903770595808 2.217227419161315 2.1639195851749684 2.160077351992632 1.6956875714045883 1.0 16.719806320663896 -7.89277794577056 0.5558418849479729 0.9696700477380966 2.6671774834018436 0.881301720619672 0.18500563408818047 0.2774536686330764 0.21072850301341914 0.1995474276058211 0.09502950391870474 1.280035617490588e-08 7.89277794577056 1.697507435663747 AGRPS(ph)KPPSPK ddPTM_KYSE-520_SHP099_60min_R1 1 AGRPSKPPSPK 11 2 Q9P2M4;B9A071;Q9P2M4-2 Q9P2M4 TBC1D14 TBC1 domain family member 14 1 AGRPS(0.926)KPPS(0.074)PK 93.478 0.0019039999999999999 4518400000.0 5190200.0 4201400.0 3579500.0 4242500.0 3977500.0 4379900.0 3981200.0 4270000.0 4899200.0 3693900.0 True False 4902289.259592806 3999558.4375700317 3810240.297402499 4645705.924445866 4290506.62112074 4352563.419458586 4383658.548767689 4255188.366625495 4009628.778781633 3661174.919810717 1.338993456189811 1.092424843163956 1.0407151750071226 1.2689112173547963 1.1718933716891515 1.188843339854304 1.1973365503646365 1.1622466721271785 1.095175419531425 1.0 21.80387527219771 -8.004351315868087 2.0462558987914106 1.0005911658822737 1.1794982645463696 0.357646354140445 0.07798649523698056 0.38385976449055753 3.6926614582068886 0.0743378035040746 0.020774714235259114 9.900307506702962e-09 8.004351315868087 0.17890709866409593 AGRPSKPPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 AGRPSKPPSPK 11 2 Q9P2M4;B9A071;Q9P2M4-2 Q9P2M4 TBC1D14 TBC1 domain family member 14 1 AGRPSKPPS(1)PK 90.70700000000001 0.0018065000000000002 4777000000.0 1996500.0 1771200.0 1699100.0 1782500.0 1448600.0 1455900.0 1443500.0 1545200.0 1825300.0 1250900.0 True False 1885750.1650759226 1686108.893374597 1808626.7046561218 1951908.264071831 1562596.578593464 1446813.1880613163 1589423.0672023883 1539840.0618523916 1493871.532068522 1239817.9991854723 1.5209895051651217 1.3599648452291595 1.4587840359184507 1.5743506428799898 1.2603435178550795 1.1669561088900422 1.281980958694419 1.2419887942133652 1.2049119572791782 1.0 20.24169692304608 -5.897068471878672 5.742106142686461 1.2021533644864955 1.4674372036584697 0.7215263268501997 0.08741845810292825 0.11987392003722629 5.735237814468781 0.026643231424906717 0.030360703432378355 1.2674520206691395e-06 5.897068471878672 0.2652838391719743 AGS(ph)AGFLR ddPTM_KYSE-520_SHP099_60min_R1 1 AGSAGFLR 8 0 E7ESL9 E7ESL9 AGAP3 1 AGS(1)AGFLR 104.2 0.0020046 266140000.0 388550.0 381490.0 358800.0 377700.0 394170.0 343820.0 306960.0 340470.0 460710.0 379970.0 True False 366996.3569447777 363162.6477718359 381928.8221002975 413596.4944403538 425188.93647948815 341674.091846447 337990.5124409044 339288.9890362951 377056.67755398527 376603.7614121871 0.9744893560505515 0.964309667035853 1.0141396906609284 1.0982272000934128 1.1290087355609955 0.9072508744077303 0.8974698265718566 0.9009176853784752 1.0012026330807209 1.0 18.522687883692218 -6.290423317011907 24.998119497397674 0.9324319013882229 1.0342889363231271 0.3921633518614136 0.058381049198015955 776.2137936679223 669467.647627794 0.022462279132893552 0.01981273501796456 5.123617295303052e-07 6.290423317011907 0.10185703493490428 AGS(ph)EECVFYTDETASPLAPDLAK ddPTM_KYSE-520_SHP099_60min_R1 2 AGSEECVFYTDETASPLAPDLAK 23 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 AGS(0.934)EECVFY(0.043)T(0.011)DET(0.01)AS(0.002)PLAPDLAK;AGS(0.946)EECVFY(0.033)T(0.01)DET(0.01)ASPLAPDLAK 54.672 0.03768 79874000.0 189026.0 206544.0 163626.0 133511.0 147994.0 189329.0 147321.0 184219.0 230427.0 201567.0 True False 178540.350966011 196621.31621113545 174173.59377085662 146199.8452984541 159640.2858293258 188147.3274829732 162213.64439440498 183579.98728603782 188587.2653919648 199781.2731967529 0.8936791127073108 0.9841829169718755 0.8718214224179222 0.7317995473703405 0.7990753251036967 0.9417665853880002 0.8119562048973942 0.9189048820669024 0.9439686832220565 1.0 17.608061830678356 -7.78287462484411 1.7434761297260504 0.9960651133607691 0.8625248220580867 0.30093203679655833 0.06850280585752737 0.46748939772189674 2.832317339266757 0.0703500545511865 0.020809635624806866 1.6486382632097886e-08 7.78287462484411 -0.1335402913026824 AGS(ph)ISTLDSLDFAR ddPTM_KYSE-520_SHP099_60min_R1 8 AGSISTLDSLDFAR 14 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 AGS(0.993)IS(0.005)T(0.002)LDSLDFAR;AGS(0.999)IS(0.001)TLDSLDFAR;AGS(0.998)IS(0.001)T(0.001)LDSLDFAR;AGS(0.816)IS(0.184)TLDSLDFAR;AGS(0.89)IS(0.11)TLDSLDFAR;AGS(0.982)IS(0.018)TLDSLDFAR;AGS(0.498)IS(0.498)T(0.004)LDSLDFAR;AGS(0.908)IS(0.092)TLDSLDFAR 323.24 7.3704e-43 2121628000.0 3134880.0 3005830.0 2555770.0 2306210.0 2524870.0 3254250.0 2651970.0 2802030.0 3460560.0 2939730.0 True False 2960981.9571716515 2861425.414957184 2720519.0235765837 2525391.505012679 2723562.9044548403 3233939.018647258 2920057.008333025 2792310.4119287203 2832209.5376185006 2913686.2792753284 1.0162322478685268 0.9820636611807286 0.9337034817122495 0.8667341858234568 0.9347481655204918 1.1099132537534484 1.0021864842152055 0.9583428496712433 0.9720365427683958 1.0 21.474414118072154 AGS(ph)IVLK ddPTM_KYSE-520_SHP099_60min_R1 2 AGSIVLK 7 0 B1ALC0;O15511;O15511-2 B1ALC0 ARPC5 Actin-related protein 2/3 complex subunit 5 1 AGS(1)IVLK;AGS(1)IVLK 110.87 0.0029711 243640000.0 522000.0 517580.0 467430.0 458180.0 446960.0 486130.0 414950.0 510360.0 562290.0 539920.0 True False 493043.6194187979 492714.67989658116 497561.28571444383 501725.28944315953 482133.2091454753 483095.88234923215 456897.19552173995 508589.68027891946 460192.31017740123 535136.7288514032 0.9213413933987443 0.9207267102636085 0.9297834719406948 0.9375646678560885 0.9009533137078954 0.902752243125099 0.8537952468753293 0.9503920266705234 0.8599527660251245 1.0 19.02954802545292 -5.771286473472858 24.982495446438236 0.9055238130449853 0.9270542086562297 0.025533554053668306 0.03988813762365478 604.9893697281763 1534880.2657818035 0.01148403456718705 0.013171899148405044 1.6932205337012111e-06 5.771286473472858 0.02153039561124437 AGS(ph)LKDPDVAELFFK ddPTM_KYSE-520_SHP099_60min_R1 1 AGSLKDPDVAELFFK 15 1 Q9UL54-2;Q9UL54-4;Q9UL54 Q9UL54-2 TAOK2 Serine/threonine-protein kinase TAO2 1 AGS(1)LKDPDVAELFFK 72.184 0.012438 15740000.0 35116.0 29402.0 27615.0 22342.0 24668.0 21397.0 27003.0 33637.0 31453.0 34632.0 True False 33168.04547798953 27989.48378669825 29395.107085562235 24465.376962632774 26609.231258279455 21263.453386185844 29732.72676388372 33520.32109793481 25741.92806560636 34325.187423288284 0.9662888382507803 0.8154211495348891 0.8563713497925088 0.7127529024367099 0.7752100791218446 0.6194708603909743 0.8662072663210351 0.9765517281689362 0.7499428261866234 1.0 15.066979977384618 -9.655838174736605 6.878136451571227 1.0000000001063538 0.8128422451955035 0.221122350410898 0.10386471813868856 2.4167658303161617e-10 0.0 0.10440304777449484 0.025321458447685245 2.2088276251822263e-10 9.655838174736605 -0.1871577549108503 AGS(ph)LKDPEIAELFFK ddPTM_KYSE-520_SHP099_60min_R1 6 AGSLKDPEIAELFFK 15 1 Q7L7X3-3;Q7L7X3;J3QS76 Q7L7X3-3 TAOK1 Serine/threonine-protein kinase TAO1 1 AGS(1)LKDPEIAELFFK;AGS(1)LKDPEIAELFFK;AGS(1)LKDPEIAELFFK;AGS(1)LKDPEIAELFFK;AGS(1)LKDPEIAELFFK;AGS(1)LKDPEIAELFFK 195.39 2.1516999999999997e-11 1000830000.0 1386416.0 1070629.0 1006116.0 1083074.0 1022295.0 937967.0 1042129.0 1258776.0 1128729.0 1217939.0 True False 1309508.7407282249 1019194.3757931077 1070971.847202517 1186009.0273219284 1102743.8004371172 932112.8000318067 1147477.5695189196 1254409.5998565285 923780.2665425814 1207149.0080022034 1.0847946128004726 0.8442987311730843 0.8871910924857109 0.9824876792010449 0.9135109196354526 0.7721605152742712 0.9505682909999336 1.0391505866641435 0.7652578599815204 1.0 20.203172339731413 -4.248268849029402 24.0324405148827 0.9065295673708579 1.08479481336193 0.27354489547858873 0.08737404441777216 1731.2717446214988 3158980.4836316397 0.021206971226865 0.3761746874408997 5.645873600646216e-05 4.248268849029402 0.17826524599107219 AGS(ph)LKDPEIAELFFKEDPEK ddPTM_KYSE-520_SHP099_60min_R1 1 AGSLKDPEIAELFFKEDPEK 20 2 Q7L7X3-3;Q7L7X3;J3QS76 Q7L7X3-3 TAOK1 Serine/threonine-protein kinase TAO1 1 AGS(1)LKDPEIAELFFKEDPEK 114.21 5.3818e-05 109830000.0 240280.0 201860.0 161620.0 189700.0 195800.0 160550.0 167950.0 185060.0 258130.0 165900.0 True False 226951.1894136949 192162.34260196274 172038.28380114306 207729.03096461546 211208.34605039394 159547.94789700132 184928.0250340434 184418.07005332853 211260.09892776428 164430.25506824686 1.3802276796292672 1.168655625585484 1.046269031996201 1.2633260884889914 1.284485911444532 0.9703077321797066 1.1246593575938257 1.121558012403409 1.284800652045943 1.0 17.32711625290285 -6.233538258886763 24.9846800254455 1.1093871074753288 1.217063534709452 0.23952239034333522 0.1128195665052456 1344.9975418754689 1204408.4426394915 0.03809629371834775 0.038088787330360425 5.840657519381124e-07 6.233538258886763 0.1076764272341233 AGS(ph)LQLSSMSAGNSSLR ddPTM_KYSE-520_SHP099_60min_R1 4 AGSLQLSSMSAGNSSLR 17 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 AGS(0.968)LQLS(0.031)S(0.001)MSAGNSSLR;AGS(1)LQLSSMSAGNSSLR;AGS(0.991)LQLS(0.009)S(0.001)MSAGNSSLR;AGS(1)LQLSSMSAGNSSLR 209.23 6.917000000000001e-18 4957400000.0 4477200.0 4621680.0 3675900.0 3504640.0 3644940.0 4549030.0 4066670.0 5029670.0 5325090.0 4801710.0 True False 4228840.790923069 4399647.555516885 3912854.395647952 3837719.9318915578 3931776.0411283057 4520637.816393005 4477768.690474502 5012223.2487038085 4358187.890594852 4759170.585073848 0.8885667608103713 0.9244567886083905 0.8221714951592213 0.8063841930624993 0.8261473235398424 0.9498793404403381 0.9408716519887089 1.0531715892730569 0.915745257012515 1.0 22.18227873591114 -6.4294647108479195 3.214859243526547 0.9798745310710363 0.8533536605594121 0.6164721130815518 0.046857948538568735 0.1834820538929241 3.6235601979534757 0.018874220083077157 0.01594412232908695 3.719934467359319e-07 6.4294647108479195 -0.1265208705116242 AGS(ph)PFS(ph)PPPSSSSLTGEAAISR ddPTM_KYSE-520_SHP099_60min_R1 6 AGSPFSPPPSSSSLTGEAAISR 22 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9K0F0;A0A087WXJ0;C9J0X3;C9J760;Q96JY6-2 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 2 AGS(1)PFS(0.994)PPPS(0.005)S(0.001)SSLTGEAAISR;AGS(1)PFS(0.883)PPPS(0.048)S(0.061)S(0.006)S(0.001)LTGEAAISR;AGS(1)PFS(0.991)PPPS(0.004)S(0.003)S(0.001)SLTGEAAISR;AGS(1)PFS(0.81)PPPS(0.048)S(0.057)S(0.068)S(0.014)LT(0.003)GEAAISR;AGS(1)PFS(0.91)PPPS(0.049)S(0.037)S(0.004)SLTGEAAISR;AGS(1)PFS(0.596)PPPS(0.322)S(0.075)S(0.007)S(0.001)LTGEAAISR 164.94 1.7995e-09 4536470000.0 5046480.0 5174730.0 4561580.0 5001810.0 5024460.0 5053220.0 5105200.0 5556190.0 6958180.0 5490830.0 True False 4766541.694491524 4926128.203371912 4855626.745586053 5477180.518550985 5419856.416733212 5021680.979583211 5621283.437950559 5536916.873714492 5694749.913443571 5442185.518001096 0.8758506446950867 0.9051746191080361 0.8922199968239073 1.0064303211336945 0.9958970341613628 0.9227324138387081 1.0329091905002248 1.017406858954009 1.0464086339223586 1.0 22.375754706606042 -4.841536426266925 0.49836012647936867 1.0230473324902458 0.8153554529609964 0.6833085865458596 0.03390046166426848 1.6096164009953506 0.4636392854259142 0.024524028605544538 0.18403362416952182 1.4403351976712613e-05 4.841536426266925 -0.2076918795292494 AGS(ph)PFSPPPSSSSLTGEAAISR ddPTM_KYSE-520_SHP099_60min_R1 7 AGSPFSPPPSSSSLTGEAAISR 22 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9K0F0;A0A087WXJ0;C9J0X3;C9J760;Q96JY6-2 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 AGS(1)PFSPPPSSSSLTGEAAISR;AGS(1)PFSPPPSSSSLTGEAAISR;AGS(0.968)PFS(0.032)PPPSSSSLTGEAAISR;AGS(0.998)PFS(0.002)PPPSSSSLTGEAAISR;AGS(1)PFSPPPSSSSLTGEAAISR;AGS(1)PFSPPPSSSSLTGEAAISR;AGS(0.998)PFS(0.002)PPPSSSSLTGEAAISR 292.04 1.304e-44 7108800000.0 2898020.0 3377380.0 2430970.0 1925950.0 2183420.0 2619950.0 1892780.0 2381430.0 2907200.0 2344830.0 True False 2737261.0535403546 3215125.595249265 2587674.215889525 2108991.708942019 2355242.7320395843 2603597.9202288934 2084120.6741526418 2373169.375159938 2379325.764548079 2324056.630450137 1.1777944726803777 1.383411037891336 1.1134299319497776 0.9074614109267798 1.0134188217192484 1.120281617115592 0.8967598495003012 1.021132335617953 1.023781319858474 1.0 21.14821379274569 -4.969873748238117 5.667311534219364 1.0003612154979578 1.2773020874067436 0.6927530472632484 0.07501203367397191 0.08941379873671193 8.176907914665039 0.01915082187930239 0.03985611648158265 1.0718308469937447e-05 4.969873748238117 0.2769408719087858 AGS(ph)PRGS(ph)PLAEGPQAFFPER ddPTM_KYSE-520_SHP099_60min_R1 1 AGSPRGSPLAEGPQAFFPER 20 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 2 AGS(1)PRGS(1)PLAEGPQAFFPER 76.19800000000001 0.0062765 156840000.0 28355.0 29929.0 25344.0 16741.0 27218.0 27179.0 21923.0 27690.0 48884.0 28923.0 True False 26782.091625708872 28491.165915655125 26977.71479183377 18332.05960663482 29359.90175076414 27009.365779461852 24139.19078786145 27593.9498528946 40007.89786535784 28666.764721753505 0.934255814552576 0.9938744812048801 0.9410798551453553 0.6394882640078219 1.0241791159811158 0.942183955588335 0.8420619146304869 0.9625763535134884 1.3956195703869652 1.0 14.807091473410898 -7.595514665903182 8.277528462614152 1.1956430790133006 0.9034490485198502 0.43198763871265045 0.13355962152304152 0.23893270883248122 24.046370172122558 0.08765456609303883 0.03282548239136906 2.5379632787909738e-08 7.595514665903182 -0.2921940304934504 AGS(ph)PSRDVGPSLGLK ddPTM_KYSE-520_SHP099_60min_R1 1 AGSPSRDVGPSLGLK 15 1 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10;F5GZI3 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 AGS(0.859)PS(0.141)RDVGPSLGLK 115.57 0.00010649 701260000.0 453150.0 477460.0 475600.0 321060.0 316970.0 362370.0 292740.0 280480.0 589540.0 330830.0 True False 428012.8661678706 454522.10491792875 506257.93698690593 351573.4458697916 341913.73568740237 360108.3144156736 322333.01606707845 279507.08034452447 482494.3970939991 327899.1035818455 1.3053188053654927 1.3861645242481653 1.5439442543658586 1.0722000823708773 1.0427406844131817 1.098229029850911 0.9830249992940961 0.852417945920849 1.4714721443987286 1.0 18.3228924321001 -5.277498006048692 23.81240456402824 1.064027759943539 1.4092447066033131 0.4855864120207062 0.15893947438204234 336.63326862915306 499173.2578522448 0.04345311539680069 0.06472207706200196 5.278396302157877e-06 5.277498006048692 0.3452169466597741 AGSIS(ph)TLDSLDFAR ddPTM_KYSE-520_SHP099_60min_R1 3 AGSISTLDSLDFAR 14 0 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 AGS(0.048)IS(0.951)TLDSLDFAR;AGS(0.001)IS(0.998)T(0.001)LDSLDFAR;AGS(0.029)IS(0.971)TLDSLDFAR 347.24 2.5819999999999998e-54 1976580000.0 1704380.0 1605880.0 1280200.0 1183620.0 1425860.0 1794560.0 1417210.0 1421920.0 1814840.0 1535640.0 True False 1609834.643802704 1528731.1143249788 1362723.7403924223 1296110.8889316707 1538067.0699663663 1783359.4853817692 1560475.4174367147 1416987.6913986222 1485310.8043933804 1522035.4243098414 1.0576853981783472 1.0043991683164493 0.8953298449084008 0.8515642068707994 1.0105330305723959 1.1716938100770051 1.0252556494500145 0.9309820709601077 0.9758713763622726 1.0 20.537570506274303 -4.512016761854914 23.957252442566286 0.9824482652651245 1.0443639001061205 0.0699404339267965 0.0814450174341446 916.1693374762475 2020682.8286722505 0.023213647678282785 0.07253990964512201 3.075978093238002e-05 4.512016761854914 0.06191563484099594 AGSLQLSSMSAGNS(ph)SLRR ddPTM_KYSE-520_SHP099_60min_R1 1 AGSLQLSSMSAGNSSLRR 18 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 AGSLQLS(0.001)S(0.001)MS(0.002)AGNS(0.498)S(0.498)LRR 48.677 0.058651 148740000.0 104960.0 92026.0 89821.0 75457.0 76736.0 78968.0 78673.0 77631.0 121160.0 96480.0 True False 99137.65956742744 87604.93282615788 95611.00537868128 82628.41059302566 82774.68663188479 78475.13142030763 86626.03461448816 77361.71618021159 99160.39819504874 95625.26226030421 1.036730851493636 0.916127503919268 0.9998509088363687 0.8640855840802878 0.8656152639515016 0.8206527183861548 0.9058906879510668 0.8090091922532258 1.036968640411374 1.0 16.54510417895971 -4.2208647926976814 0.9748219465672435 0.8916913866344444 1.1004736430950788 0.18348107939561897 0.0746613024102818 3.1714592883794013 2.292899512611003 0.024057391219209835 0.7116479458050279 6.013609278270459e-05 4.2208647926976814 0.20878225646063442 AGSPFS(ph)PPPSSSSLTGEAAISR ddPTM_KYSE-520_SHP099_60min_R1 4 AGSPFSPPPSSSSLTGEAAISR 22 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9K0F0;A0A087WXJ0;C9J0X3;C9J760;Q96JY6-2 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 AGS(0.081)PFS(0.919)PPPSSSSLTGEAAISR;AGS(0.426)PFS(0.572)PPPS(0.001)SSSLTGEAAISR;AGSPFS(1)PPPSSSSLTGEAAISR;AGSPFS(0.997)PPPS(0.001)S(0.001)S(0.001)SLTGEAAISR 199.81 5.6275e-14 3609110000.0 720930.0 909000.0 607260.0 609090.0 558270.0 827770.0 632720.0 859020.0 963230.0 848020.0 True False 680938.5757616749 865330.2755631824 646404.9512503532 666977.7304704137 602202.6728782087 822603.5803843082 696681.5123521275 856040.2601167755 788331.7130523 840507.202549576 0.8101519816797892 1.0295334447323101 0.7690653325629605 0.7935419571030661 0.716475327101898 0.9786990258846572 0.8288822632796354 1.0184805763949218 0.9379238044135637 1.0 19.680900656822743 -7.257536413977629 24.844315260331 0.9836516454772869 0.8487062698028568 0.33052903548671875 0.09050865914180886 378.9627360505427 2412305.3439863576 0.045244979655121184 0.024870537283218756 5.5266706692291946e-08 7.257536413977629 -0.1349453756744301 AGSPS(ph)RDVGPSLGLK ddPTM_KYSE-520_SHP099_60min_R1 1 AGSPSRDVGPSLGLK 15 1 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10;F5GZI3 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 AGS(0.428)PS(0.572)RDVGPSLGLK 142.39 1.6187e-05 772640000.0 796470.0 1081600.0 978840.0 782240.0 800580.0 697610.0 611640.0 643800.0 1194400.0 754870.0 True False 752288.221376418 1029638.3124853012 1041937.5925993741 856583.8544109674 863581.0913229022 693255.957224709 673470.5402311527 641566.8080640498 977527.0683737703 748182.4390799724 1.0054876753075017 1.3761861528739305 1.3926250312432187 1.1448863401074936 1.1542386538567166 0.9265867801938713 0.9001421378712233 0.8575004899245883 1.3065357021421395 1.0 19.51303057859131 -5.910146753766562 2.124337000226899 0.985513987901362 1.2612032512834288 0.3294557159999232 0.15469095254070706 0.33535330970922844 3.084331709938043 0.054680837873599564 0.06362775719932937 1.2298531171892354e-06 5.910146753766562 0.2756892633820668 AGSRLS(ph)AEER ddPTM_KYSE-520_SHP099_60min_R1 5 AGSRLSAEER 10 1 B1AJQ6;Q86Y82 B1AJQ6 STX12 Syntaxin-12 1 AGS(0.005)RLS(0.995)AEER;AGSRLS(1)AEER;AGSRLS(1)AEER;AGS(0.04)RLS(0.96)AEER;AGS(0.011)RLS(0.989)AEER 142.85 0.00014446 2312660000.0 1957560.0 2278880.0 1987780.0 2150870.0 2215470.0 2185130.0 2149609.0 2322330.0 2752060.0 1985020.0 True False 1848970.244500885 2169399.1841313806 2115915.479360453 2355288.0381173547 2389814.8847000324 2171491.793137182 2366912.4558821353 2314274.379265895 2252355.2777869413 1967434.2671221902 0.9397875575306589 1.102653959211867 1.0754694653435357 1.1971368383059053 1.214686012456044 1.1037175825515488 1.203045253117539 1.1762905719086796 1.144818566712021 1.0 20.907884004761627 -3.8454196475525717 1.1112725192958222 1.155776608257134 0.6253706276948442 0.47329605287966525 0.06278518143959397 2.954626335467225 1.6193426588444755 0.018240955031461514 2.2859617231520386 0.0001427513922000296 3.8454196475525717 -0.5304059805622897 AGT(ph)EDEEEEEEGRR ddPTM_KYSE-520_SHP099_60min_R1 4 AGTEDEEEEEEGRR 14 1 O95456;O95456-2;F8WBH7 O95456 PSMG1 Proteasome assembly chaperone 1 1 AGT(1)EDEEEEEEGRR;AGT(1)EDEEEEEEGRR;AGT(1)EDEEEEEEGRR;AGT(1)EDEEEEEEGRR 167.41 5.253999999999999e-08 1233424000.0 662564.0 602887.0 613116.0 550263.0 617689.0 550322.0 598422.0 610696.0 661517.0 535273.0 True False 625810.2541314117 573923.4035681639 652638.4383802848 602559.8300773961 666297.6101303458 546887.2362664191 658916.3357959044 608577.6381135179 541402.188286514 530530.8976560918 1.1795924740599806 1.0817907234126833 1.230161035415033 1.1357676484810426 1.2559072677464727 1.0308301338952928 1.2419942716004382 1.1471106410620755 1.0204913430649412 1.0 19.017077249322682 -7.765511814851827 4.322257135929137 1.002685063205627 1.1638086640315555 0.45884069735321 0.06669907371847167 0.16573729963310668 6.9831168680197635 0.05454782724906003 0.015885336626736336 1.715885029345667e-08 7.765511814851827 0.16112360082592847 AGT(ph)GYASPDRTHVLAAGK ddPTM_KYSE-520_SHP099_60min_R1 1 AGTGYASPDRTHVLAAGK 18 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 AGT(0.542)GYAS(0.453)PDRT(0.004)HVLAAGK 100.19 0.0013099000000000001 614410000.0 586300.0 587060.0 516580.0 470240.0 552020.0 553380.0 485590.0 569680.0 675880.0 532300.0 True False 553776.7702399256 558856.7564049754 549879.5733572241 514931.4682171884 595460.833435845 549926.1501541121 534678.1761017025 567703.9130443118 553157.2295482784 527584.2361231335 1.0496461651494058 1.059274933064041 1.0422592937914983 0.97601753987397 1.1286554689569415 1.0423475769389066 1.013446080251938 1.0760441161320347 1.0484718679486407 1.0 19.009041932872474 -4.773946110867587 23.457193691140528 1.0435084477634686 1.0544605486795207 0.015010651837788713 0.039666407644320625 666.1367317425572 1249404.064404784 0.010294977102962606 0.021713910579619154 1.6828828674798186e-05 4.773946110867587 0.010952100916052032 AGT(ph)PVSELTK ddPTM_KYSE-520_SHP099_60min_R1 8 AGTPVSELTK 10 0 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 AGT(0.995)PVS(0.005)ELTK;AGT(1)PVSELTK;AGT(1)PVSELTK;AGT(0.803)PVS(0.171)ELT(0.026)K;AGT(1)PVSELTK;AGT(1)PVSELTK;AGT(0.999)PVS(0.001)ELTK;AGT(1)PVSELTK 187.85 1.7415e-05 15129330000.0 22953300.0 26390600.0 17520860.0 15955870.0 17058380.0 23160290.0 16768390.0 21732160.0 24714300.0 21210400.0 True False 21680034.692730866 25122755.962901812 18650282.669967193 17472311.08749276 18400777.457094587 23015738.039236624 18463502.504915755 21656776.20928425 20226806.116803337 21022492.357441504 1.031278038974128 1.195041745562053 0.8871584944762936 0.831124625492274 0.8752900057818841 1.0948149081424 0.8782737170733269 1.0301716771283889 0.9621507180447845 1.0 24.325430384822983 -4.766908061716724 24.99938325105133 0.9423795436757222 1.1131599015990583 0.385660183881509 0.08491285274789681 121.17526235230801 553947.242087529 0.02256227687559771 0.04922101153650981 1.7103773563345e-05 4.766908061716724 0.17078035792333612 AGTFIAPPVYSNITPYQSHLRS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 2 AGTFIAPPVYSNITPYQSHLRSPVR 25 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 AGTFIAPPVYSNIT(0.002)PYQS(0.013)HLRS(0.984)PVR;AGTFIAPPVYSNITPYQSHLRS(1)PVR 162.12 2.606e-10 1397870000.0 218815.0 338260.0 371510.0 322630.0 279066.0 326210.0 272518.0 324910.0 480650.0 320500.0 True False 206676.89575311172 322009.4818613884 395458.1290370166 353292.6581977531 301026.9065316606 324174.00238854473 300066.7789593774 323782.9630445639 393376.07620048017 317660.61934522656 0.6506217112436585 1.0136902790315208 1.2449076308298745 1.1121701485250912 0.947636843220126 1.020504219429981 0.9446143484133657 1.0192732221953005 1.2383532998560571 1.0 18.27712672345309 -4.2751887296107345 4.524388547524371 1.0619815167709385 0.6280270933833921 0.600384277335964 0.1008575162843569 0.12872453760612357 6.714368153390952 0.026576808110330148 0.17361800592505455 5.306537900286822e-05 4.2751887296107345 -0.4339544233875464 AGTGYAS(ph)PDRTHVLAAGK ddPTM_KYSE-520_SHP099_60min_R1 7 AGTGYASPDRTHVLAAGK 18 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 AGT(0.041)GYAS(0.957)PDRT(0.002)HVLAAGK;AGT(0.005)GYAS(0.993)PDRT(0.001)HVLAAGK;AGT(0.178)GYAS(0.822)PDRTHVLAAGK;AGT(0.05)GYAS(0.934)PDRT(0.016)HVLAAGK;AGT(0.017)GYAS(0.983)PDRTHVLAAGK;AGT(0.338)GYAS(0.662)PDRTHVLAAGK;AGT(0.054)GYAS(0.946)PDRTHVLAAGK 158.78 2.0419e-08 19085930000.0 11487830.0 10102890.0 10396470.0 8988760.0 9969310.0 10102030.0 9640020.0 9512370.0 12602300.0 9810430.0 True False 10850577.169478644 9617531.999652943 11066643.091140136 9843049.047830759 10753837.979385365 10038979.483612245 10614527.29912878 9479373.808673857 10314039.998130256 9723517.22259904 1.1159107266514767 0.9891001146478384 1.1381316901891685 1.0122930645871544 1.10596173516222 1.0324432254081906 1.0916345450038272 0.9748914504560392 1.0607313960589018 1.0 23.21304683395236 -7.252420505789211 24.986657265085697 1.0133585662196125 1.0667059664715968 0.2247156238575917 0.04872875610117546 924.406917861198 2561065.436659387 0.021085745237290093 0.011941667782275851 5.592158782991299e-08 7.252420505789211 0.053347400251984256 AGTQIENIDEDFRDGLK ddPTM_KYSE-520_SHP099_60min_R1 4 AGTQIENIDEDFRDGLK 17 1 O43707;F5GXS2;O43707-3;K7EP19 O43707 ACTN4 Alpha-actinin-4 0 ;;; 269.33 1.1874999999999999e-29 4535490000.0 1795870.0 1767510.0 1262160.0 1022770.0 1831370.0 1697490.0 1293940.0 1411870.0 1508870.0 1588970.0 False True 1696249.5111219117 1682596.1665134022 1343520.8531274039 1119973.753292986 1975488.3999300818 1686895.3352580576 1424744.0828374526 1406972.5525029348 1234897.2435173579 1574892.9619999519 1.077057014063895 1.0683876346597412 0.8530870894370312 0.7111427762498441 1.254363596508435 1.0711174511287893 0.904660899003685 0.8933766207934694 0.7841150308711555 1.0 20.586822348133907 -6.910761878783974 7.220563632936454 0.8829804880929002 0.999452797814508 0.12100394528381364 0.1445813710946236 0.5314032578007218 36.41615834850737 0.06506959806373619 0.04372935371406594 1.2281124137032064e-07 6.910761878783974 0.11647230972160783 AGTQIENIEEDFRDGLK ddPTM_KYSE-520_SHP099_60min_R1 6 AGTQIENIEEDFRDGLK 17 1 P12814-3;P12814;P12814-2;P12814-4;G3V2N5;G3V5M4;G3V380 P12814-3 ACTN1 Alpha-actinin-1 0 ;;;;; 231.21 3.5141e-19 682425000.0 555184.0 521537.0 394809.0 336611.0 514184.0 490985.0 375606.0 418040.0 436100.0 424766.0 False True 524386.8367881345 496481.5796770033 420259.01985673467 368602.4082342123 554647.3554932368 487920.5804933616 413575.9200413034 416589.91681126977 356915.2331863712 421002.90370294696 1.2455658433133603 1.1792830294284928 0.9982330671839329 0.8755341233805181 1.3174430642041064 1.1589482547551042 0.9823588303160875 0.9895179181595599 0.847773804045316 1.0 18.683470658187854 -6.867778685803052 4.727812152860461 0.9477138450630064 1.1221971872818286 0.32974985058701356 0.12203852265939286 0.29216617719795046 10.87195521939357 0.056412588578517865 0.037570468213083213 1.355880185781275e-07 6.867778685803052 0.17448334221882222 AGVDYAPNLPPFPS(ph)PADVK ddPTM_KYSE-520_SHP099_60min_R1 4 AGVDYAPNLPPFPSPADVK 19 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 AGVDYAPNLPPFPS(1)PADVK;AGVDYAPNLPPFPS(1)PADVK;AGVDYAPNLPPFPS(1)PADVK;AGVDYAPNLPPFPS(1)PADVK 190.23 8.3705e-13 434144000.0 873210.0 929560.0 714568.0 638959.0 742540.0 1254070.0 1152190.0 1544410.0 1717770.0 1562730.0 True False 824771.3005990201 884902.542301994 760630.196629225 699685.4712499711 800973.6735253287 1246242.8839563539 1268664.609490768 1539052.802178003 1405866.2694578134 1548885.427985543 0.5324934212026936 0.5713156869536083 0.49108228593672626 0.45173481434322194 0.5171290652318055 0.8046062422946277 0.8190822810830973 0.9936518055952478 0.9076631776995034 1.0 20.562799000352673 -6.490430442209062 1.695449963616677 0.9479947588031447 0.5055547111806623 0.9338088630289543 0.05316557270130369 0.08884833221470682 0.5134251406095379 0.02592583741178658 0.01988837221948894 3.232730924953558e-07 6.490430442209062 -0.44244004762248235 AGVLAGHDNR ddPTM_KYSE-520_SHP099_60min_R1 5 AGVLAGHDNR 10 0 B3KVK2;E7EP32;P62879-2;P62873-2;Q9HAV0;P62879;P62873 B3KVK2 GNB1;GNB2;GNB4 Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2;Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1;Guanine nucleotide-binding protein subunit beta-4 0 ;;;; 136.63 0.00046622 2801480000.0 2459500.0 2585670.0 1699542.0 1686425.0 2564370.0 2671820.0 1825651.0 2409190.0 2441749.0 2142069.0 False True 2323066.632108301 2461450.532030207 1809097.196683345 1846702.3249578346 2766171.3297305843 2655144.1803186955 2010205.6197167374 2400833.0821991726 1998388.933083211 2123091.9351644646 1.0941903144332492 1.1593706759757116 0.8521049732795503 0.8698174084556448 1.3028975730701478 1.2506025463814952 0.9468292853559436 1.1308191804766066 0.9412634940504385 1.0 21.017735414205767 -2.5400682937509673 1.4938552202659425 1.0540358855993013 10.504803785058186 0.010411186534967976 0.1478886992051822 1669.2172916363686 31.054194682785056 0.04388401521596451 52966.7764575167 0.002883578018562615 2.5400682937509673 9.450767899458885 AGVLAHLEEER ddPTM_KYSE-520_SHP099_60min_R1 2 AGVLAHLEEER 11 0 P35579;P35579-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 0 ; 151.15 3.6531999999999995e-05 713600000.0 1235410.0 1200360.0 860190.0 678940.0 1039540.0 989490.0 677130.0 798540.0 812680.0 870640.0 False True 1166879.3445712214 1142692.9038229075 915639.2237526631 743466.253469245 1121345.8838264896 983314.225877321 745580.9085519601 795770.0511206375 665117.797995643 862926.8069476702 1.3522344365435661 1.324206056206344 1.061085617436601 0.861563515565151 1.2994681296237567 1.1395105795304739 0.864014076917156 0.9221756059884402 0.7707696558278057 1.0 19.71887867030481 -1.0000000000110947 0.28910752748342644 0.8918415458895161 4.884679121777939 0.4938781804585354 0.14280087083320345 47.173603013841785 0.6693145143901988 0.16322660788299526 96.20015752100338 0.09999999999744535 1.0000000000110947 3.992837575888423 AGVLT(ph)PPDLGPHPPPPAPR ddPTM_KYSE-520_SHP099_60min_R1 4 AGVLTPPDLGPHPPPPAPR 19 0 I3L2J0 I3L2J0 CIC 1 AGVLT(1)PPDLGPHPPPPAPR;AGVLT(1)PPDLGPHPPPPAPR;AGVLT(1)PPDLGPHPPPPAPR;AGVLT(1)PPDLGPHPPPPAPR 143.33 3.3331e-06 2146890000.0 2560000.0 3035910.0 2266180.0 1780670.0 2087940.0 2970750.0 2251850.0 2985210.0 3376180.0 3188070.0 True False 2417991.6967665227 2890060.326606187 2412261.588816201 1949904.3414220416 2252248.999246471 2952208.447306238 2479488.9739381373 2974855.00326325 2763150.8185718004 3159826.180080925 0.7652293382494212 0.9146263629387902 0.7634159131988777 0.6170922798582874 0.7127762322637601 0.9342945716180597 0.7846915724568863 0.9414615974816254 0.8744629169763491 1.0 21.591413768222612 -7.285723314442357 0.8347461693157967 0.9746723573013459 0.7670406027390858 0.4110421465358748 0.08786580586458374 0.6760645571538613 0.8692472576758692 0.08621860578942847 0.03743533119851748 5.1793670021036256e-08 7.285723314442357 -0.20763175456226013 AGVVNGTGAPGQS(ph)PGAGR ddPTM_KYSE-520_SHP099_60min_R1 3 AGVVNGTGAPGQSPGAGR 18 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;Q13330-2 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 AGVVNGTGAPGQS(1)PGAGR;AGVVNGTGAPGQS(1)PGAGR;AGVVNGTGAPGQS(1)PGAGR 206.11 1.1401e-14 523960000.0 552260.0 652640.0 531510.0 403528.0 397990.0 591770.0 470110.0 646750.0 679210.0 632360.0 True False 521625.0368969839 621286.194767389 565771.9850460689 441879.17979488324 429309.5487466614 588076.5439240647 517633.3066314623 644506.5752025853 555882.5854907471 626757.7823686361 0.8322593696813214 0.9912700125069545 0.9026963860072222 0.7050238421052202 0.6849688361654154 0.938283592908272 0.8258905133578529 1.0283184243311239 0.8869177234464672 1.0 19.257548479361095 -7.248313697171127 24.50030041553265 0.9682135559469061 0.8409007758582453 0.2873336362891955 0.09498542113225873 839.9612291281605 1567870.0069824143 0.04884891278252641 0.02796752567190293 5.6452906002248786e-08 7.248313697171127 -0.12731278008866076 AGYTDKVVIGMDVAASEFFR ddPTM_KYSE-520_SHP099_60min_R1 3 AGYTDKVVIGMDVAASEFFR 20 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ;; 122.3 5.755e-05 170081600.0 232860.0 207100.0 238353.0 250904.0 208728.0 123308.0 109142.0 147595.0 209647.0 89828.0 False True 219942.79160509817 197150.60513656252 253717.615758284 274749.8407229618 225153.70610013595 122538.3890332198 120175.13848327202 147083.02739393196 171580.3895707939 89032.19380512642 2.4703737176970924 2.214374337086263 2.849728900465161 3.085960583250751 2.5289021473844864 1.3763379716491286 1.3497941963141025 1.6520207029365934 1.9271724332250972 1.0 16.44203948466943 -6.2251563909047665 5.961466882607156 1.4939700974620038 2.651105292954456 0.7816350937068047 0.30875945530841487 0.09921931991307445 10.45369625836112 0.10973627375366433 0.1078304395103457 5.954476822025701e-07 6.2251563909047665 1.1571351954924523 AHAHLDTGR ddPTM_KYSE-520_SHP099_60min_R1 4 AHAHLDTGR 9 0 Q14697;Q14697-2;F5H6X6;E9PKU7 Q14697 GANAB Neutral alpha-glucosidase AB 0 ;;; 94.85 0.005697600000000001 2165360000.0 1453510.0 1425410.0 1030340.0 983070.0 1395540.0 1381480.0 1144620.0 1274590.0 1318760.0 1005910.0 False True 1372880.9027996494 1356931.1640159714 1096757.3650022869 1076500.6772292268 1505361.0584635672 1372857.6708860125 1260329.3600146878 1270168.7447815414 1079306.427234255 996998.4199861378 1.3770141208636397 1.3610163635312864 1.1000592809540621 1.0797416080601154 1.509893123486091 1.3769908190076174 1.2641237285333022 1.273992735915471 1.082555805102742 1.0 19.927231692721296 -7.844554408675923 2.754976576079214 1.0006082298846493 1.2932097453663836 0.41238459232887736 0.1222548953813546 0.2733469951696409 4.004088529780023 0.1255205216879617 0.03455672444215749 1.430360773130063e-08 7.844554408675923 0.2926015154817343 AHAHLDTGRR ddPTM_KYSE-520_SHP099_60min_R1 2 AHAHLDTGRR 10 1 Q14697;Q14697-2;F5H6X6;E9PKU7 Q14697 GANAB Neutral alpha-glucosidase AB 0 ; 80.755 0.024225 107609000.0 94706.0 92449.0 74076.0 67591.0 98982.0 91849.0 63265.0 87702.0 95506.0 56022.0 False True 89452.46938826969 88007.61127122183 78851.05748579065 74014.82831802487 106771.32026945909 91275.73632134325 69660.44360689931 87397.78223180062 78164.517910336 55525.688664456444 1.6110105347604762 1.5849890994248574 1.4200824768205969 1.3329835270535573 1.9229175330842212 1.64384699256817 1.2545624427615776 1.5740062723030468 1.4077181173328033 1.0 15.76086776064246 -8.762025492123708 0.6326003084911218 0.9793067045534987 1.560544569700859 0.47368552206756054 0.1734275886906609 2.669791926736401 1.488614474723024 0.31361106445236314 0.07324446798597413 1.7297148258079422e-09 8.762025492123708 0.5812378651473604 AHAWPS(ph)PYK ddPTM_KYSE-520_SHP099_60min_R1 1 AHAWPSPYK 9 0 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 AHAWPS(1)PYK 81.017 0.006518600000000001 683090000.0 624130.0 629300.0 466840.0 623200.0 724950.0 785350.0 781820.0 899110.0 946110.0 656340.0 True False 589508.2647276908 599067.483401442 496933.2533704097 682428.7406280879 781999.4405987387 780448.3393392091 860853.9954278985 895991.197263851 774320.2734922214 650525.3382247934 0.9062033868448369 0.9208980007392581 0.763895307639333 1.0490425207576926 1.2021045063866729 1.1997201238447686 1.3233212372281562 1.3773348163638095 1.190299943742775 1.0 19.31124572602911 -5.597933156862076 2.64576742013663 1.2426582711084846 0.86956617937168 0.6956608685886057 0.10321627714339716 0.14244491288796302 2.019482013791871 0.03198864426554265 0.044723434798190076 2.523869196376702e-06 5.597933156862076 -0.3730920917368046 AHAWPS(ph)PYKDYEVK ddPTM_KYSE-520_SHP099_60min_R1 8 AHAWPSPYKDYEVK 14 1 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 AHAWPS(0.681)PY(0.153)KDY(0.165)EVK;AHAWPS(0.895)PY(0.103)KDY(0.001)EVK;AHAWPS(0.801)PY(0.195)KDY(0.004)EVK;AHAWPS(1)PYKDYEVK;AHAWPS(1)PYKDYEVK;AHAWPS(0.999)PY(0.001)KDYEVK;AHAWPS(1)PYKDYEVK;AHAWPS(1)PYKDYEVK 180.14 3.7828e-09 13171420000.0 10696130.0 11634550.0 9797300.0 12852100.0 14431560.0 14285420.0 15290380.0 16023290.0 18820090.0 12597840.0 True False 10102794.346693465 11075608.754184421 10428849.634234253 14073559.719875246 15567241.667655887 14196259.394872492 16836080.83012822 15967708.946854012 15402836.071860785 12486232.9385712 0.8091146782537543 0.8870256392519138 0.8352278614007362 1.1271261547909008 1.246752462831856 1.136952951679994 1.3483715154888638 1.2788251689208994 1.2335855135522829 1.0 23.573834949757916 -5.365374245914091 3.0843250700728015 1.22391253762164 0.8436844691319363 0.7640665321183235 0.0901267685375752 0.11383531328198798 2.068832648584532 0.025733847521074313 0.04119418671115146 4.311473827455319e-06 5.365374245914091 -0.3802280684897037 AHAWPS(ph)PYKDYEVKK ddPTM_KYSE-520_SHP099_60min_R1 2 AHAWPSPYKDYEVKK 15 2 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 AHAWPS(1)PYKDYEVKK;AHAWPS(1)PYKDYEVKK 145.88 5.0717e-06 2684100000.0 1229860.0 1631480.0 1346830.0 1488510.0 1935820.0 1850760.0 1627290.0 1764670.0 3114500.0 1321840.0 True False 1161637.2141348722 1553101.2518985944 1433648.8168041925 1629977.5428631506 2088158.0206908777 1839208.7203354358 1791792.3540199357 1758548.7716470764 2548985.3101558182 1310129.5259759598 0.8866582968348334 1.185456262991735 1.0942802130470413 1.2441346527542192 1.5938561640577775 1.4038373182722883 1.367645197283199 1.3422709257216945 1.9455979425064807 1.0 20.32127802020568 -5.48802413689111 3.213526295605963 1.453549817608096 1.0696942718742848 0.3554232269619396 0.23259262359804475 0.2737760096471296 5.724844748458356 0.06698338065251014 0.0987761184913469 3.2506923043090655e-06 5.48802413689111 -0.3838555457338113 AHEEQLK ddPTM_KYSE-520_SHP099_60min_R1 4 AHEEQLK 7 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;; 155.51 0.0021247 1776930000.0 3401560.0 3370240.0 1841090.0 1787380.0 3572190.0 4202730.0 2487400.0 3005490.0 2758920.0 3894030.0 False True 3212868.6859582504 3208328.6115666227 1959769.6072481521 1957252.0578046087 3853301.0300191813 4176499.203146466 2738850.6666846005 2995064.656676642 2257969.6747134672 3859531.923709501 0.8324503461731377 0.8312740184522197 0.5077739078174445 0.5071216138363848 0.9983855830671997 1.0821258343504823 0.7096328572538964 0.7760175886297642 0.5850371805043321 1.0 21.879994460265614 -4.591384956149653 24.999999999825004 0.7636876266945603 0.8322933730992785 0.014506193797574118 0.19458611072437307 267.25058096698683 97523.36097042331 0.05319387237051881 0.14073778143513105 2.5622118996600625e-05 4.591384956149653 0.06860574640471828 AHEPTYFTVDCAEAGQGDVSIGIK ddPTM_KYSE-520_SHP099_60min_R1 1 AHEPTYFTVDCAEAGQGDVSIGIK 24 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 157.07 1.8612999999999999e-07 197680000.0 162140.0 110400.0 90952.0 130880.0 116900.0 94877.0 96790.0 143540.0 130710.0 123830.0 False True 153145.7709819232 105096.21828622157 96814.91144834527 143318.79584949312 126099.36492998504 94284.83745016373 106574.47777936903 143042.0932424877 106976.35893095743 122732.9625382822 1.247796580597937 0.8562998571263244 0.7888256703503534 1.1677286434342355 1.0274286737815264 0.7682112083031885 0.8683443760768579 1.1654741341216366 0.8716188114304659 1.0 16.90516324180769 -4.250255065634501 24.444029823972134 0.9477439646124803 1.2477968205623997 0.30950295009150186 0.13521406616001855 1615.2400270677144 3530120.3888430307 0.034567546645610604 0.5058451530807518 5.620111532885265e-05 4.250255065634501 0.3000528559499194 AHFNAMFQPS(ph)SPTR ddPTM_KYSE-520_SHP099_60min_R1 5 AHFNAMFQPSSPTR 14 0 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 AHFNAMFQPS(0.499)S(0.499)PT(0.003)R;AHFNAMFQPS(0.669)S(0.329)PT(0.002)R;AHFNAMFQPS(0.498)S(0.498)PT(0.003)R;AHFNAMFQPS(0.449)S(0.449)PT(0.102)R;AHFNAMFQPS(0.499)S(0.499)PT(0.001)R 188.15 9.7429e-09 4264450000.0 2974810.0 3193350.0 2961900.0 3294970.0 2911460.0 2862720.0 2685450.0 2860440.0 3534630.0 2865900.0 True False 2809791.35916329 3039936.672683928 3152828.8132075574 3608122.9581311457 3140575.338058628 2844852.7026079334 2956921.4934663386 2850517.8012717157 2892830.2927712495 2840510.3556364574 0.9891853953596009 1.0702079176200667 1.1099515292916862 1.2702375652218643 1.1056377005726272 1.0015287206972716 1.0409824726035184 1.0035231153498174 1.0184192030953074 1.0 21.437718731940507 -6.228849087118095 7.047490303722237 1.014843690991573 1.1162178193496626 0.3453695819448779 0.06582377634412541 0.2732754423683128 47.10899317699194 0.02389791358370878 0.02355391585277312 5.904062046362106e-07 6.228849087118095 0.10137412835808957 AHFNAMFQPSS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 7 AHFNAMFQPSSPTR 14 0 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 AHFNAMFQPS(0.002)S(0.992)PT(0.006)R;AHFNAMFQPS(0.013)S(0.963)PT(0.024)R;AHFNAMFQPS(0.011)S(0.989)PT(0.001)R;AHFNAMFQPS(0.135)S(0.854)PT(0.012)R;AHFNAMFQPS(0.028)S(0.945)PT(0.028)R;AHFNAMFQPS(0.059)S(0.864)PT(0.078)R;AHFNAMFQPS(0.009)S(0.987)PT(0.004)R 240.2 2.8792e-19 3894710000.0 3500243.0 3506781.0 3201856.0 3626157.0 3209922.0 3610016.0 3049528.0 3263082.0 4013365.0 3314965.0 True False 3306077.5432285694 3338309.9769744026 3408252.7609107373 3970785.8710361393 3462524.5994421435 3587484.5510765593 3357804.050765199 3251763.1301510655 3284639.0846985085 3285596.9891037415 1.0062334346521344 1.016043656006953 1.037331350197169 1.2085431914518847 1.0538494559512805 1.0918821033054233 1.0219768467955512 0.9897023709648866 0.9997084534687578 1.0 21.64772409967955 -6.935968629450591 4.5278680730157514 0.9973773671267576 1.0705985113918464 0.2798592976715083 0.053013275276136314 0.2980343289156629 12.156109780428164 0.025223008455166954 0.016400963976433376 1.1588610615595151e-07 6.935968629450591 0.07322114426508874 AHGELHEQFKR ddPTM_KYSE-520_SHP099_60min_R1 2 AHGELHEQFKR 11 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 0 ; 98.353 0.0019303 58059000.0 54290.0 65149.0 55578.0 41256.0 55051.0 50326.0 43942.0 45879.0 51958.0 36534.0 False True 51278.42547556815 62019.14424935737 59160.646807944155 45176.957835931324 59383.20050265696 50011.89676651813 48384.086192592615 45719.856457239075 42523.736954591775 36210.337183021904 1.416126704824259 1.7127469411811098 1.6338054657961887 1.2476259916495238 1.6399516028395398 1.3811497118554152 1.3361954059703887 1.2626189097923104 1.1743535206441011 1.0 15.144113990497997 -7.33996021970684 0.4827681616318107 0.9889023090212272 1.582019527993702 0.6659664928706308 0.12448586936132687 0.5380090591147372 0.30559029164116286 0.13106133674258627 0.08910808054954418 4.57130059672473e-08 7.33996021970684 0.5931172189724747 AHGNSGMVR ddPTM_KYSE-520_SHP099_60min_R1 1 AHGNSGMVR 9 0 C9K025;P18077 C9K025 RPL35A 60S ribosomal protein L35a 0 88.13600000000001 0.0033793 0.0 31926.0 34133.0 25138.0 42802.0 32247.0 35346.0 23758.0 21131.0 24672.0 29531.0 False True 30155.00113709684 32493.19944532246 26758.435702222105 46869.88921110948 34784.65543966828 35125.39250306703 26159.690495735646 21057.701493012486 20192.18673050711 29269.378314770354 1.0302576574330438 1.1101431364849064 0.914212642798732 1.6013284842287645 1.188431645714686 1.2000730635724342 0.8937562736867065 0.719444781728966 0.6898741241906537 1.0 14.837104482599738 -6.871256255587079 3.713517450734632 0.7820745288965627 1.1801128807698962 0.46590356978366154 0.18367243285102794 0.2045687304693629 5.35245104581459 0.0845403518653787 0.0552843995164495 1.3450664629981307e-07 6.871256255587079 0.3980383518733335 AHGS(ph)FSHVR ddPTM_KYSE-520_SHP099_60min_R1 4 AHGSFSHVR 9 0 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AHGS(0.989)FS(0.011)HVR;AHGS(0.984)FS(0.016)HVR;AHGS(0.968)FS(0.032)HVR;AHGS(0.898)FS(0.102)HVR 152.7 0.00015821 7810800000.0 509770.0 496319.0 521710.0 592870.0 389724.0 464770.0 421258.0 433947.0 504970.0 471510.0 True False 481492.0418986988 472475.09024999285 555340.2613655136 649216.1865471341 420393.0615737677 461869.1980323218 463842.86972188705 432441.7391409909 413280.17725778883 467332.7882292296 1.030298010381681 1.011003512165812 1.18831863578362 1.3891946015752046 0.8995582423537599 0.9883089945013063 0.9925322626718185 0.9253400361219156 0.8843380727120571 1.0 18.834090735171 AHLDHIPDYTPPLLTTIS(ph)PEQESDER ddPTM_KYSE-520_SHP099_60min_R1 9 AHLDHIPDYTPPLLTTISPEQESDER 26 0 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-3;K7EM61 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 1 AHLDHIPDYTPPLLTT(0.002)IS(0.994)PEQES(0.003)DER;AHLDHIPDYTPPLLT(0.013)T(0.051)IS(0.917)PEQES(0.02)DER;AHLDHIPDYTPPLLT(0.389)T(0.04)IS(0.571)PEQESDER;AHLDHIPDYTPPLLTT(0.001)IS(0.999)PEQESDER;AHLDHIPDYTPPLLTT(0.004)IS(0.996)PEQESDER;AHLDHIPDYTPPLLTT(0.003)IS(0.997)PEQESDER;AHLDHIPDYTPPLLTT(0.001)IS(0.999)PEQESDER;AHLDHIPDYTPPLLTT(0.003)IS(0.997)PEQESDER;AHLDHIPDYTPPLLTTIS(1)PEQESDER 239.39 9.2716e-29 3416687000.0 1541859.0 1688714.0 1538574.0 1395806.0 1585770.0 1568875.0 1530982.0 1608081.0 1915909.0 1489586.0 True False 1456329.0076502864 1607585.6446286088 1637752.9418454391 1528462.9825756233 1710561.0772029278 1559083.0691803677 1685748.601504434 1602502.942339928 1568028.2217355373 1476389.42692037 0.9864125149474092 1.0888628808334828 1.109296038011909 1.0352708809110578 1.158611031759433 1.0560107250513775 1.1418048455012106 1.085420223905708 1.0620695279607348 1.0 20.493641880278144 -4.260924809250352 23.533770976534765 1.0874516341404246 0.9864124613628615 0.279040361727222 0.045282037581175015 21.65175621937372 989566.6908360652 0.010318235651830123 0.059167762844783756 5.483718980288433e-05 4.260924809250352 -0.10103917277756302 AHLPLGQS(ph)NSCGSVLPPSLAAMAK ddPTM_KYSE-520_SHP099_60min_R1 4 AHLPLGQSNSCGSVLPPSLAAMAK 24 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PRT1;A0A1W2PRJ2 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 AHLPLGQS(0.984)NS(0.016)CGSVLPPSLAAMAK;AHLPLGQS(0.991)NS(0.009)CGSVLPPSLAAMAK;AHLPLGQS(0.591)NS(0.403)CGS(0.006)VLPPSLAAMAK;AHLPLGQS(0.643)NS(0.332)CGS(0.025)VLPPSLAAMAK 175.65 1.4723e-16 17054460000.0 4323650.0 5336700.0 4007490.0 4919060.0 3402900.0 4438730.0 3612620.0 3993850.0 5036450.0 4349720.0 True False 4083808.515517411 5080316.921449987 4265819.217610715 5386565.983430681 3670688.870147522 4411026.23960671 3977818.8853735393 3979996.266521601 4121957.638572567 4311184.864830948 0.9472589655877692 1.1784038682482243 0.9894772206150774 1.2494398065302867 0.8514338830820372 1.023158685583221 0.922674162693211 0.9231792166902743 0.9561078375919282 1.0 22.039652996339907 -5.778429742301662 24.995872947949312 0.9449336911886148 1.0901158302718532 0.37904874901268903 0.09094090701793878 240.6221339848503 353996.98632947716 0.02605511121703545 0.029618351707827024 1.6655982570312518e-06 5.778429742301662 0.1451821390832384 AHLPLGQSNS(ph)CGSVLPPSLAAMAK ddPTM_KYSE-520_SHP099_60min_R1 1 AHLPLGQSNSCGSVLPPSLAAMAK 24 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PRT1;A0A1W2PRJ2 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 AHLPLGQS(0.052)NS(0.948)CGSVLPPSLAAMAK 223.34 1.8496e-21 20309000000.0 4506100.0 5927400.0 4765200.0 5564600.0 3749600.0 5069800.0 3718400.0 4912100.0 4878800.0 4316200.0 True False 4256137.650312353 5642638.806791214 5072372.416589572 6093457.9109420115 4044672.1876943638 5038157.497653181 4094292.1600868464 4895061.071592759 3992932.904539483 4277961.825952791 0.9948984641452294 1.3190016733107435 1.1856983823037854 1.424383423427317 0.9454671061244291 1.1777004336711394 0.957066081153018 1.1442507602326555 0.9333727291150323 1.0 22.02849217811177 -5.780517308898071 24.99791132368529 1.0376294347891513 1.2340462250460935 0.3821973422054319 0.12697746394367035 253.5564222321245 332234.84600652475 0.037158887468564016 0.04219988312381006 1.6576112710859304e-06 5.780517308898071 0.19641679025694225 AHLS(ph)ENELEALEK ddPTM_KYSE-520_SHP099_60min_R1 8 AHLSENELEALEK 13 0 P98175-2;P98175;P98175-5;P98175-4;P98175-3 P98175-2 RBM10 RNA-binding protein 10 1 AHLS(1)ENELEALEK;AHLS(1)ENELEALEK;AHLS(1)ENELEALEK;AHLS(1)ENELEALEK;AHLS(1)ENELEALEK;AHLS(1)ENELEALEK;AHLS(1)ENELEALEK;AHLS(1)ENELEALEK 275.42 1.3234999999999998e-22 4279780000.0 3194280.0 3025550.0 2713370.0 3122800.0 3089560.0 3406290.0 3229620.0 3666870.0 3511330.0 3606520.0 True False 3017086.9207606846 2880198.036556861 2888278.1717455033 3419589.9730959414 3332690.794808251 3385030.0806108783 3556101.507653742 3654150.4838238964 2873760.9854260483 3574569.038630102 0.8440421455440503 0.805746932128258 0.808007382297585 0.9566439859296846 0.9323335928868933 0.9469757176401155 0.9948336342712135 1.0222632279118864 0.8039461413024974 1.0 21.769337885813947 -5.263016285496477 24.800021134129583 0.9528081318411364 0.8179136251592098 0.5293709170662623 0.05689808280397134 92.79517817224126 1459401.6830846574 0.015417452881660604 0.02431156488590568 5.457373962420659e-06 5.263016285496477 -0.1348945066819266 AHLS(ph)ENELEALEKNDMEQMK ddPTM_KYSE-520_SHP099_60min_R1 7 AHLSENELEALEKNDMEQMK 20 1 P98175-2;P98175;P98175-5;P98175-4;P98175-3 P98175-2 RBM10 RNA-binding protein 10 1 AHLS(1)ENELEALEKNDMEQMK;AHLS(1)ENELEALEKNDMEQMK;AHLS(1)ENELEALEKNDMEQMK;AHLS(1)ENELEALEKNDMEQMK;AHLS(1)ENELEALEKNDMEQMK;AHLS(1)ENELEALEKNDMEQMK;AHLS(1)ENELEALEKNDMEQMK 311.58 1.13e-53 1526562000.0 1446567.0 1601924.0 1483496.0 1464365.0 1507506.0 1623118.0 1365897.0 1484026.0 1936371.0 1540080.0 True False 1366323.0448501792 1524965.1665030555 1579124.525837524 1603537.8093226103 1626138.145664172 1612987.5184969483 1503975.1986300952 1478878.2601802705 1584774.8383405784 1526436.089364111 0.8951066175455585 0.9990363678693759 1.0345172895482067 1.050510938843577 1.0653168887939457 1.056701639679453 0.9852854037646787 0.9688438778962228 1.0382189266769566 1.0 20.541735755666984 -4.2771070367810635 2.851880197523706 1.0257301915508772 0.8742786370776757 0.6276438846668608 0.029894490417998777 0.28299302830119516 3.318028188556112 0.008654511108599652 0.0977160734081535 5.283150265217114e-05 4.2771070367810635 -0.15145155447320147 AHPPELK ddPTM_KYSE-520_SHP099_60min_R1 2 AHPPELK 7 0 C9JVQ0;P62308;A8MWD9 C9JVQ0 SNRPG;SNRPGP15 Small nuclear ribonucleoprotein G;Putative small nuclear ribonucleoprotein G-like protein 15 0 ; 88.029 0.013465000000000001 953920000.0 3584240.0 3198490.0 2551480.0 2554440.0 3406270.0 3320540.0 2843680.0 3452950.0 3270690.0 3230310.0 False True 3385415.0621947017 3044829.739368631 2715952.4833123432 2797213.209579608 3674324.0699748513 3299815.2781682257 3131146.92604232 3440972.5223745885 2676815.143385308 3201691.9665431534 1.0573831266628417 0.9510064588306146 0.8482866283494286 0.8736671856036611 1.1476194800657216 1.0306473304272976 0.9779663249188209 1.0747356579995373 0.8360626729108636 1.0 21.610403082763096 -4.250610828151184 22.90490838431532 0.97415305811658 1.0573832832691838 0.0687372995525567 0.09467109255388535 1598.0902336832214 3380114.572785362 0.024545761233760215 0.32178494526943136 5.615509571792346e-05 4.250610828151184 0.08323022515260381 AHPPRS(ph)PPPRPQR ddPTM_KYSE-520_SHP099_60min_R1 1 AHPPRSPPPRPQR 13 2 Q6PJG9 Q6PJG9 LRFN4 Leucine-rich repeat and fibronectin type-III domain-containing protein 4 1 AHPPRS(1)PPPRPQR 62.104 0.021135 391690000.0 87343.0 108420.0 85123.0 87303.0 123480.0 83676.0 80614.0 83678.0 104440.0 51172.0 True False 82497.90967604618 103211.34045826225 90610.16478161549 95600.25087139603 133197.1734949062 83153.7470459637 88763.24983682265 83387.74054859206 85476.32871814858 50718.655891213595 1.626579179325964 2.0349778330017294 1.786525356191717 1.8849129416293864 2.626196833382192 1.6395100695160396 1.750110452990136 1.6441236283439837 1.6853035084661292 1.0 15.63022889228278 -8.269840163602217 0.6592538195309023 0.9954738140067985 1.9521173821559388 0.5081644884778327 0.26894369694196746 0.9436130359377262 0.8468355175362803 0.2934148921308283 0.11084096335950203 5.372294802667247e-09 8.269840163602217 0.9566435681491403 AHQHLVDFDCHLDDIR ddPTM_KYSE-520_SHP099_60min_R1 1 AHQHLVDFDCHLDDIR 16 0 H0YNH6;Q9Y3B6 H0YNH6 EMC9 ER membrane protein complex subunit 9 0 169.98 2.1684e-08 475870000.0 32642.0 27702.0 25805.0 21239.0 32494.0 36206.0 28320.0 27988.0 31952.0 19380.0 False True 30831.283189786256 26371.15433845029 27468.431589459822 23257.548174261803 35051.09293443052 35980.024924066194 31182.861976565084 27890.91616044829 26150.32224437267 19208.308277411852 1.6051014355096813 1.3729035351573173 1.4300286726323277 1.2108066904367463 1.8247881296058281 1.8731490771822505 1.6234049103238724 1.452023559682599 1.361406838473346 1.0 14.229442842474707 -8.096303666398835 1.7329090343913445 1.0030009368978454 1.5553396707804428 0.448238580108672 0.18808176919881056 0.5045473366364782 3.2548400731489364 0.20072604383325915 0.05728981339088928 8.011177118041654e-09 8.096303666398835 0.5523387338825974 AHQLVHEGYK ddPTM_KYSE-520_SHP099_60min_R1 2 AHQLVHEGYK 10 0 O00743-2;O00743;O00743-3 O00743-2 PPP6C Serine/threonine-protein phosphatase 6 catalytic subunit;Serine/threonine-protein phosphatase 6 catalytic subunit, N-terminally processed 0 ; 162.38 7.8445e-05 63290000.0 115500.0 89118.0 70135.0 59743.0 91391.0 98585.0 69811.0 75607.0 76854.0 70976.0 False True 109092.98475645829 84836.63751115484 74656.01431996761 65420.95675761207 98582.95175634087 97969.694446751 76868.17716970285 75344.73696380638 62899.25093167932 70347.2078584924 1.550779172016398 1.2059702167825734 1.061250568325933 0.9299723293810072 1.4013768955073007 1.392659316967105 1.0926969173293666 1.0710409020833749 0.8941257634305104 1.0 16.102205542333973 -4.286658731233994 3.218044051016109 1.122327827453842 1.600225155159198 0.40103075607056116 0.162084792002331 0.3501504927199201 5.898759479599891 0.0446677596979075 0.4051877398394905 5.168223289285633e-05 4.286658731233994 0.477897327705356 AHQLVMEGYNWCHDR ddPTM_KYSE-520_SHP099_60min_R1 2 AHQLVMEGYNWCHDR 15 0 P67775;P62714;H0YC23 P67775 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform 0 ; 224.55 1.9274000000000002e-14 1813150000.0 404950.0 391070.0 240930.0 256800.0 349340.0 367930.0 288440.0 318480.0 281500.0 256820.0 False True 382486.61625218886 372282.4101919624 256460.73330162952 281206.19479026465 376831.0705272958 365633.61239329644 317598.33010312275 317375.2672137909 230386.69603752226 254544.77460293632 1.5026300062487186 1.4625419467859226 1.007527000708154 1.1047415733790544 1.480411731551408 1.4364215999469927 1.2477110582943354 1.246834737459701 0.9050930092629158 1.0 17.95755992412101 -7.676493623257539 4.313986326539189 0.9517621324045636 1.311799965472739 0.4561020687763011 0.15767249665380828 0.21109065337782115 6.957206500744108 0.13415996250198395 0.044397101596278646 2.106232824564198e-08 7.676493623257539 0.3600378330681754 AHS(ph)DDEKWGR ddPTM_KYSE-520_SHP099_60min_R1 2 AHSDDEKWGR 10 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 AHS(1)DDEKWGR;AHS(1)DDEKWGR 193.0 1.7899e-06 2364940000.0 2722300.0 2739600.0 2676800.0 2017970.0 2460400.0 2170800.0 1884010.0 1777520.0 3184300.0 1916090.0 True False 2571288.5922294953 2607985.5037765647 2849350.81103143 2209757.262075195 2654019.482238964 2157251.2319826256 2074464.116965689 1771354.197996285 2606111.389670627 1899114.933295461 1.353940484143125 1.3732636493205959 1.5003572248716202 1.1635721584478766 1.3975033504862953 1.1359245268211495 1.0923320545776296 0.9327261699335502 1.3722768137831143 1.0 20.85689578849132 -6.339579510299927 4.47708107099589 1.0965343286890834 1.3559175085835027 0.47751107460629827 0.13145206187542946 0.19960978281636524 7.432351660416286 0.04597729263860323 0.04056526083076203 4.575309628011136e-07 6.339579510299927 0.2593831798944193 AHS(ph)HEEASRPAATSTR ddPTM_KYSE-520_SHP099_60min_R1 5 AHSHEEASRPAATSTR 16 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 AHS(1)HEEASRPAATSTR;AHS(1)HEEASRPAATSTR;AHS(1)HEEASRPAATSTR;AHS(1)HEEASRPAATSTR;AHS(1)HEEASRPAATSTR 154.48 2.4301e-06 1168890000.0 149487.0 160756.0 160796.0 238604.0 174819.0 173594.0 179565.0 191299.0 244001.0 157198.0 True False 141194.65811505332 153033.0404603246 171161.16744269672 261280.85242109155 188576.260715954 172510.53545457538 197717.1825855192 190635.4284185223 199696.56916465893 155805.34801819333 0.9062247214939378 0.9822065956455809 1.0985577171761158 1.6769697301441917 1.210332399462527 1.1072183185549664 1.2690012576617835 1.2235486832984825 1.2817054851117204 1.0 17.249385229190093 -5.0050354563620045 21.142958860033968 1.265075152628316 0.9682561039615086 0.35745803666064635 0.16549817739777595 31.322461973813024 131538.68636488527 0.04403466647406357 0.08710705911704526 9.88472391200873e-06 5.0050354563620045 -0.2968190486668073 AHS(ph)IQIMK ddPTM_KYSE-520_SHP099_60min_R1 4 AHSIQIMK 8 0 Q02543;M0R0P7;M0R3D6;M0R1A7;M0R117 Q02543 RPL18A 60S ribosomal protein L18a 1 AHS(1)IQIMK;AHS(1)IQIMK;AHS(1)IQIMK;AHS(1)IQIMK 97.81299999999999 0.0020479 4621080000.0 9547300.0 10160000.0 9235200.0 9882000.0 10273300.0 9757700.0 9346300.0 9789600.0 11241600.0 9863700.0 True False 9017692.236929296 9671898.349529082 9830515.768842442 10821182.308868362 11081750.262918865 9696798.574864957 10291115.21509782 9755642.162509812 9200408.817674642 9776315.291842485 0.9224019446727341 0.9893193970124378 1.0055440598407441 1.1068773853782856 1.1335303672300399 0.9918663919274496 1.0526578683161838 0.9978853863940004 0.9410916631700301 1.0 23.220859382983537 -10.08181912125131 13.523722520077616 0.9999950104104864 1.0206236543507312 5.102343947527288e-05 0.06303810305025201 0.0 0.0 0.06549927267271367 0.01588590703710182 8.282870640949331e-11 10.08181912125131 0.020628643940244773 AHS(ph)NPMADHTLR ddPTM_KYSE-520_SHP099_60min_R1 2 AHSNPMADHTLR 12 0 F8VSD9;H0YHX0;Q9UBP6-2;Q9UBP6 F8VSD9 METTL1 tRNA (guanine-N(7)-)-methyltransferase 1 AHS(1)NPMADHTLR;AHS(1)NPMADHTLR 149.73 1.285e-05 2214750000.0 1168420.0 1140760.0 1079230.0 1115910.0 1333140.0 1125210.0 1096540.0 1262280.0 1301630.0 1074030.0 True False 1103605.4134124764 1085956.1772843308 1148798.8926290534 1221965.7508894256 1438050.5334710018 1118187.147014542 1207388.9643991063 1257901.4452983667 1065286.803422097 1064514.9297826956 1.0367214047789453 1.020141800647185 1.079175933083027 1.1479085137292262 1.3508974775624403 1.0504194123823165 1.1342151534178824 1.1816663252953605 1.0007250942356993 1.0 20.0217647530011 -5.021366478032803 3.525090424967272 1.137529647108187 1.0299584960905157 0.12394223260386517 0.09646193943235844 0.4096483794068245 10.745840771726595 0.026558772082856848 0.05496352027716131 9.519924891139161e-06 5.021366478032803 -0.10757115101767134 AHS(ph)PAEGASVESSSPGPK ddPTM_KYSE-520_SHP099_60min_R1 2 AHSPAEGASVESSSPGPK 18 0 C9J4C4;Q8NFG4-3;Q8NFG4-2;Q8NFG4 C9J4C4 FLCN Folliculin 1 AHS(0.968)PAEGAS(0.032)VESSSPGPK;AHS(0.451)PAEGAS(0.142)VES(0.319)S(0.085)S(0.003)PGPK 108.34 0.00012195 995780000.0 360310.0 341800.0 339740.0 344770.0 422750.0 323050.0 254000.0 327220.0 376940.0 298270.0 True False 340322.88603982265 325379.4149477403 361640.18400322006 377536.8371411198 456018.01988153235 321033.72512068733 279676.7988011132 326084.95019372174 308497.1978841335 295627.5598505489 1.1511879549114736 1.1006396531914417 1.2232965836677847 1.2770691519152653 1.5425423127399454 1.085939772607744 0.9460444044611421 1.1030262210957944 1.043533282350572 1.0 18.17342124529545 -6.503650098972405 24.864241776883947 1.0294872607404146 1.2556847301896987 0.4910268126159637 0.11497373107065216 686.4023234991259 887577.549111169 0.044136644038905354 0.03830689756718846 3.135811157418883e-07 6.503650098972405 0.2261974694492841 AHS(ph)PASTLPNS(ph)PGSTFER ddPTM_KYSE-520_SHP099_60min_R1 2 AHSPASTLPNSPGSTFER 18 0 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9;A0A3B3IUC2 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 2 AHS(1)PASTLPNS(0.845)PGS(0.148)T(0.007)FER;AHS(0.996)PAS(0.007)T(0.002)LPNS(0.995)PGSTFER 240.91 4.2124e-22 428110000.0 442550.0 485800.0 417080.0 794500.0 484490.0 447230.0 391800.0 508780.0 635390.0 361440.0 True False 418000.8692984473 462461.4387993343 443965.64415159455 870009.041124864 522616.60662898526 444438.6716784547 431406.9675995124 507015.16093014413 520019.1928784419 358237.92279606516 1.1668247349022385 1.290933788332065 1.2393038701386503 2.4285788459647133 1.4588533859004544 1.2406242985376543 1.204247066397547 1.4153028718256992 1.4516028588477337 1.0 18.45055854245271 -6.1220051420718535 5.988772132984154 1.2872722387830464 1.5451329776222487 0.11603377144289273 0.34914895689207837 0.601931100419694 27.064357854791957 0.1230401255013148 0.12344086956146351 7.550832873825921e-07 6.1220051420718535 0.25786073883920224 AHS(ph)PASTLPNSPGSTFER ddPTM_KYSE-520_SHP099_60min_R1 1 AHSPASTLPNSPGSTFER 18 0 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9;A0A3B3IUC2 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 1 AHS(0.864)PAS(0.132)T(0.003)LPNSPGSTFER 176.25 9.122299999999999e-09 761350000.0 86016.0 120450.0 118410.0 195470.0 96524.0 84617.0 96482.0 108450.0 146020.0 103890.0 True False 81244.52101135507 114663.40120086419 126042.89806269879 214047.41002980157 104119.88965356609 84088.87391591755 106235.34213357892 108073.81226242027 119506.44886465001 102969.61542519687 0.7890145134161041 1.1135654020594294 1.2240785550399933 2.0787434151902615 1.0111710063558006 0.8166377388969138 1.0317154404714124 1.0495699320245726 1.160599157053922 1.0 16.65185915997801 -5.934535311756151 24.99999999965401 1.0046514460149167 1.315234347466825 0.1710737074774541 0.31165269138769525 106.96514515146565 40847.077772621946 0.10223897287642954 0.11592810292220179 1.1626920106220247e-06 5.934535311756151 0.31058290145190837 AHSEPLALCGETAPRDS(ph)PPASEAPASEPGYVNYTK ddPTM_KYSE-520_SHP099_60min_R1 1 AHSEPLALCGETAPRDSPPASEAPASEPGYVNYTK 35 1 K7ELE9;Q66K64 K7ELE9 DCAF15 DDB1- and CUL4-associated factor 15 1 AHSEPLALCGETAPRDS(0.924)PPAS(0.075)EAPASEPGYVNYTK 125.79 4.8438e-05 388880000.0 96810.0 104720.0 100740.0 64160.0 84267.0 98661.0 74059.0 96513.0 120550.0 91565.0 True False 91439.75631404965 99689.09401207538 107233.86158969895 70257.74710959263 90898.33348635609 98045.2201025603 81545.60646618763 96178.21892930358 98661.1588182001 90753.80533649206 1.0075583715196763 1.0984563527937317 1.1815908015328176 0.7741575887544853 1.0015925299146207 1.0803427992802452 0.898536498429319 1.0597706462301957 1.0871297181687267 1.0 16.469670516597088 AHSEVFTKPSGQQTLS(ph)PDR ddPTM_KYSE-520_SHP099_60min_R1 4 AHSEVFTKPSGQQTLSPDR 19 1 F5H212;P15822;A0A0D9SFF3;P15822-2;P15822-3 F5H212 HIVEP1 Zinc finger protein 40 1 AHSEVFTKPSGQQTLS(1)PDR;AHSEVFTKPSGQQT(0.002)LS(0.997)PDR;AHSEVFTKPSGQQTLS(1)PDR;AHSEVFTKPSGQQT(0.015)LS(0.985)PDR 302.66 1.4043999999999998e-44 3467730000.0 1345800.0 1428450.0 1302590.0 1533000.0 1286040.0 1148870.0 1185390.0 1320580.0 1586810.0 1292590.0 True False 1271145.7912142137 1359825.1178528364 1386557.0356176898 1678695.8590867433 1387244.031433344 1141699.4761783106 1305220.789491542 1315999.2162056898 1298685.30422487 1281138.6582198043 0.9922000113403212 1.0614191595329503 1.0822849086018282 1.310315513716026 1.0828211470575537 0.8911599605968878 1.0187974432878333 1.0272106050053362 1.0136961334298096 1.0 20.288995196994684 -6.016930643269705 24.643434769087374 0.9929211858344057 1.1172187046268736 0.3266383553352623 0.08362560055106445 769.8372842654019 1120538.5654256984 0.02894359374994597 0.029649434599226615 9.617658599096422e-07 6.016930643269705 0.12429751879246786 AHSLGGLDPAFTS(ph)TEDLNCK ddPTM_KYSE-520_SHP099_60min_R1 6 AHSLGGLDPAFTSTEDLNCK 20 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 AHSLGGLDPAFT(0.001)S(0.98)T(0.019)EDLNCK;AHSLGGLDPAFT(0.001)S(0.996)T(0.003)EDLNCK;AHSLGGLDPAFTS(0.971)T(0.029)EDLNCK;AHSLGGLDPAFTS(0.885)T(0.114)EDLNCK;AHSLGGLDPAFTS(0.814)T(0.186)EDLNCK;AHSLGGLDPAFT(0.002)S(0.869)T(0.13)EDLNCK 263.16 1.8565e-35 6717650000.0 4306070.0 3805000.0 3565710.0 3962320.0 3761250.0 4005100.0 3823960.0 4278360.0 4591440.0 4057930.0 True False 4067203.7131622694 3622202.08857856 3795561.3719377182 4338897.701485052 4057238.976414934 3980102.68528359 4210523.195053168 4263519.367736727 3757750.2367833816 4021979.897221767 1.0112441675732247 0.9006017387308777 0.9437047098518692 1.0787964665070056 1.008766597569899 0.9895879111760096 1.0468782297896713 1.060054867673955 0.9343035850027731 1.0 21.939474440064668 -5.224575835223688 24.68941348543314 1.019185445158737 0.9467253215930846 0.2962176973912719 0.04565900116715207 557.987253668824 373711.5613381996 0.01200245231591001 0.02078841220580597 5.9624419633754556e-06 5.224575835223688 -0.07246012356565235 AHSLGGLDPAFTS(ph)TEDLNCKENLEQDLGDDNSNDLLLSCPHFR ddPTM_KYSE-520_SHP099_60min_R1 1 AHSLGGLDPAFTSTEDLNCKENLEQDLGDDNSNDLLLSCPHFR 43 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 AHSLGGLDPAFT(0.016)S(0.859)T(0.125)EDLNCKENLEQDLGDDNSNDLLLSCPHFR 198.02 1.7974000000000001e-16 766270000.0 49731.0 45313.0 44332.0 48063.0 44755.0 52152.0 33707.0 43221.0 57904.0 48100.0 True False 46972.32229370933 43136.09546380034 47189.71165370795 52630.89306933215 48276.96387888345 51826.500023197834 37114.43250861861 43071.07643885724 47390.09324105398 47673.87142123375 0.9852844103780514 0.9048162898846871 0.9898443370950957 1.1039777450482144 1.0126503772332842 1.0871049167639975 0.7785067879360011 0.9034524605373995 0.99404751131553 1.0 15.54091116571703 -6.739087905662425 24.999974559323874 0.9109559151183453 1.0119237475485614 0.2649716504680055 0.0769597557587478 321.80291503725306 359934.21815637854 0.030686144584000097 0.023751119437207518 1.8235265644618367e-07 6.739087905662425 0.10096783243021612 AHSPASTLPNS(ph)PGSTFER ddPTM_KYSE-520_SHP099_60min_R1 4 AHSPASTLPNSPGSTFER 18 0 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9;A0A3B3IUC2 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 1 AHSPAST(0.002)LPNS(0.991)PGS(0.005)T(0.002)FER;AHSPASTLPNS(1)PGSTFER;AHSPAST(0.001)LPNS(0.965)PGS(0.033)T(0.001)FER;AHSPASTLPNS(1)PGSTFER 330.53 1.5822000000000003e-53 3566200000.0 543498.0 755030.0 652309.0 1398120.0 640514.0 725468.0 599102.0 633285.0 889490.0 574646.0 True False 513349.0825035985 718757.225476864 694357.8818713026 1530996.9044398947 690918.8077738602 720940.085113309 659665.0768320655 631088.2821448297 727981.0382181728 569555.0835078236 0.9013159523429078 1.261962620103611 1.2191233156849959 2.6880576589900005 1.2130851392258173 1.2657951899456725 1.1582112001692002 1.1080373091537175 1.27815738863153 1.0 19.119475850804985 -5.96216771987102 24.99993863003142 1.1764256579284058 1.5370998427749905 0.12837799611958234 0.44274209409116033 367.4762948509778 242830.37924845846 0.14385334215073584 0.1631140394767304 1.0910189152761324e-06 5.96216771987102 0.36067418484658464 AHSQYYAAQQAGTRPHAGDRDPR ddPTM_KYSE-520_SHP099_60min_R1 2 AHSQYYAAQQAGTRPHAGDRDPR 23 2 Q9Y2J4-3;Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4;D6RCL7;D6RJA4;D6RF61 Q9Y2J4-3 AMOTL2 Angiomotin-like protein 2 0 ; 52.483000000000004 0.033246 47011000.0 11555.8 12475.0 6181.5 7935.1 7011.0 6866.1 7201.2 8585.8 10092.7 3594.0 False True 10914.776738083818 11875.682274643248 6579.9693807497015 8689.249518225193 7562.725812866757 6823.24612304952 7929.167572939283 8556.01786374078 8260.120096262528 3562.159956089689 3.064089449274861 3.3338430674178965 1.8471852645193312 2.4393204194467715 2.123073052892502 1.915479991678881 2.2259437169248892 2.401918490244618 2.31885153897748 1.0 11.798536585682205 -1.0000000000086497 0.0657833633343259 2.8595646891336913e-11 7.4071885322301725 0.5760233115854984 0.3988217050161831 239.94858085941306 1.174157889737672 24.589295358019044 166.66859241553772 0.09999999999800832 1.0000000000086497 7.407188532201577 AHT(ph)PLNTPDPSTK ddPTM_KYSE-520_SHP099_60min_R1 5 AHTPLNTPDPSTK 13 0 Q9BYW2;H7C3H4;A0A1W2PPX9 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 AHT(1)PLNTPDPSTK;AHT(1)PLNTPDPSTK;AHT(1)PLNTPDPSTK;AHT(1)PLNTPDPSTK;AHT(1)PLNTPDPSTK 176.49 4.6765e-07 4942840000.0 8596750.0 9427290.0 7286510.0 6227050.0 7263610.0 9718820.0 7421750.0 9342840.0 10608410.0 9372600.0 True False 8119871.1403037375 8974388.837749224 7756210.093428203 6818866.959769149 7835214.782712467 9658161.23936676 8172012.919299851 9310431.868675256 8682190.160253683 9289566.055772448 0.8740850855200203 0.9660719116338727 0.8349378266822881 0.7340350366023793 0.8434424962018262 1.039678407083964 0.8796980257459756 1.0022461558244524 0.9346174092662437 1.0 23.14717977477955 -6.237483094711204 24.271410559760785 0.9656665111588677 0.8495978609086889 0.4512390807928115 0.06642488347378547 569.7147814350302 577208.8722045628 0.023206547676293186 0.023193315500025444 5.787845175991922e-07 6.237483094711204 -0.11606865025017876 AHT(ph)PTPGIYMGR ddPTM_KYSE-520_SHP099_60min_R1 17 AHTPTPGIYMGR 12 0 Q13595;Q13595-3;Q13595-4;Q13595-2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.999)PT(0.001)PGIYMGR;AHT(0.999)PT(0.001)PGIYMGR;AHT(1)PTPGIYMGR;AHT(0.997)PT(0.003)PGIYMGR;AHT(1)PTPGIYMGR;AHT(1)PTPGIYMGR;AHT(0.994)PT(0.006)PGIYMGR;AHT(0.782)PT(0.218)PGIYMGR;AHT(0.999)PT(0.001)PGIYMGR;AHT(1)PTPGIYMGR;AHT(0.854)PT(0.146)PGIYMGR;AHT(0.999)PT(0.001)PGIYMGR;AHT(0.992)PT(0.008)PGIYMGR;AHT(0.995)PT(0.005)PGIYMGR;AHT(0.998)PT(0.002)PGIYMGR;AHT(0.774)PT(0.226)PGIYMGR;AHT(0.998)PT(0.002)PGIYMGR 174.21 4.0602e-06 116715000000.0 30432270.0 27325400.0 23008490.0 24488670.0 24244050.0 30716010.0 28804220.0 30823770.0 30850990.0 29739080.0 True False 28744131.317873772 26012646.7677384 24491654.080285612 26816065.834012873 26151918.805224996 30524299.988064583 31716031.659696873 30716849.536192037 25249227.906169232 29475614.887854125 0.9751834330593805 0.8825141347079176 0.8309124058469691 0.9097712104069741 0.8872391264686149 1.0355780567835613 1.0760091614837166 1.042110559968314 0.8566141199169202 1.0 24.813018573647447 -6.255224204052497 24.547388603514857 1.0093159648702001 0.8933365868984248 0.4009145677110998 0.06374785833723133 389.0053493934412 1536411.5297315698 0.021839334343230384 0.021326618762203143 5.556173463691335e-07 6.255224204052497 -0.11597937797177538 AHT(ph)PTPGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_KYSE-520_SHP099_60min_R1 20 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 33 1 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.548)PT(0.452)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.959)PT(0.041)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.55)PT(0.45)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.952)PT(0.048)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.873)PT(0.127)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.968)PT(0.032)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.899)PT(0.101)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.99)PT(0.01)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.976)PT(0.024)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.976)PT(0.024)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.985)PT(0.015)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.812)PT(0.188)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.83)PT(0.17)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.721)PT(0.271)PGIY(0.003)MGRPT(0.003)HS(0.003)GGGGGGGGGGGGGGGGR;AHT(0.82)PT(0.18)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.82)PT(0.18)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.728)PT(0.272)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.966)PT(0.034)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.961)PT(0.039)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.837)PT(0.163)PGIYMGRPTHSGGGGGGGGGGGGGGGGR 275.17 1.1984999999999999e-41 87524730000.0 4083158.0 4466451.0 4576584.0 4830107.0 3897245.0 3749793.0 3903984.0 4020345.4 5299843.0 3326772.4 True False 3856657.086166329 4251875.9896803675 4871597.927433308 5289158.917055375 4203936.009209226 3726389.150971916 4298636.801932146 4006399.7601630734 4337525.109369766 3297299.7847257643 1.1696410208230692 1.2895024011394205 1.4774507158858405 1.6040879696643273 1.2749632377023512 1.1301335620842976 1.3036839482551517 1.2150547483495757 1.3154779342365792 1.0 21.65285362960382 -5.989220607294605 24.922647021671636 1.2120492022167237 1.3917531795285056 0.30464614432236925 0.13527662858811995 289.5559859440359 669467.3783573586 0.04357653240557002 0.04936548940684785 1.0251310611520368e-06 5.989220607294605 0.1797039773117819 AHT(ph)PTPGIYMGRPTHSGGGGGGGGGGGGGGGGRR ddPTM_KYSE-520_SHP099_60min_R1 3 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGRR 34 2 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.952)PT(0.048)PGIYMGRPTHSGGGGGGGGGGGGGGGGRR;AHT(0.952)PT(0.048)PGIYMGRPTHSGGGGGGGGGGGGGGGGRR;AHT(0.892)PT(0.108)PGIYMGRPTHSGGGGGGGGGGGGGGGGRR 133.36 1.8387000000000002e-05 1375880000.0 275990.0 269169.0 162456.0 377160.0 115406.0 174205.0 195890.0 293527.0 166345.0 56229.0 True False 260680.28452757504 256237.7172090937 172928.17369879037 413005.17300271115 124487.79562968203 173117.7219769364 215692.4729021654 292508.8233467165 136140.9412162048 55730.85480550002 4.677485845809219 4.597771164705083 3.1029162266092545 7.410709461466077 2.2337320334335957 3.106317363713782 3.8702523701624427 5.248597466655924 2.442828872647566 1.0 15.766188661337944 -5.849219813638024 21.639205683810026 3.2465446022784117 4.796764641180897 0.2951010631456593 1.4454401630486495 12.215288736877438 3004.880953337735 0.4409687424964013 0.5000125114141628 1.4150773719674253e-06 5.849219813638024 1.5502200389024856 AHT(ph)SPAPAPRPTPR ddPTM_KYSE-520_SHP099_60min_R1 3 AHTSPAPAPRPTPR 14 1 Q96P48-3;Q96P48 Q96P48-3 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 1 AHT(0.573)S(0.427)PAPAPRPTPR;AHT(0.5)S(0.5)PAPAPRPTPR;AHT(0.575)S(0.425)PAPAPRPTPR 137.61 1.8474e-05 7108800000.0 1038950.0 1032520.0 907720.0 830230.0 886430.0 782820.0 817030.0 840820.0 1050590.0 789080.0 True False 981317.3724045227 982916.1893558837 966233.0836033513 909134.8095822494 956186.9979032198 777934.1300076649 899623.3658443835 837903.3916688635 859829.3392186878 782089.3650949514 1.254738161904789 1.2567824512439836 1.2354509941278176 1.1624436415547905 1.2226058051398407 0.9946870073002694 1.1502820598195485 1.0713652800625104 1.099400372378543 1.0 19.576973940298295 -5.306531418980383 0.30084100326784236 1.012072498601512 1.3813262955451002 0.6996416022592722 0.052048528961039085 2.305754478324277 0.2781105071501443 0.06372977620459179 0.30047555684920363 4.937061998439325e-06 5.306531418980383 0.3692537969435883 AHTCFNR ddPTM_KYSE-520_SHP099_60min_R1 2 AHTCFNR 7 0 Q9HCE7-2;Q9HCE7;K7EKL1;A0A2R8YE75;A0A2R8Y6F3;Q9HAU4;Q9P2P5;Q76N89-2;Q76N89;A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5;Q96PU5-3;K7ERN1;H0Y8X6;P46934-4;P46934-3;P46934-2;P46934 Q9HCE7-2;A0A1B0GVY1;H0Y8X6 SMURF1;NEDD4L;SMURF2;HECW2;HECW1;NEDD4 E3 ubiquitin-protein ligase SMURF1;E3 ubiquitin-protein ligase SMURF2;E3 ubiquitin-protein ligase HECW2;E3 ubiquitin-protein ligase HECW1;E3 ubiquitin-protein ligase NEDD4-like;E3 ubiquitin-protein ligase NEDD4 0 ; 138.37 0.0029269 278810000.0 215110.0 299680.0 239820.0 134473.0 204980.0 226170.0 153435.0 177983.0 176441.0 190672.0 False True 203177.419488846 285282.92297114903 255279.18092556729 147253.27348921847 221110.75982333868 224758.38913649836 168945.70718129477 177365.61851454436 144403.76211565363 188982.7944205715 1.0751106740261502 1.5095708783746025 1.3508064673731968 0.7791887824534643 1.1700047112821712 1.1893060943755023 0.8939740133449121 0.9385278647104047 0.764110630062388 1.0 17.527895367433228 -5.677638243244684 0.5904573322673272 0.8940644845537787 1.3493613049163977 0.34855536769054496 0.18538485375659752 1.1953811707612871 0.8384456083814632 0.13627533801820768 0.3012760339780738 2.1006889779431096e-06 5.677638243244684 0.455296820362619 AHTGDGAKPDS(ph)PQKETLEVENQQEGGLKPLAQEHGPR ddPTM_KYSE-520_SHP099_60min_R1 1 AHTGDGAKPDSPQKETLEVENQQEGGLKPLAQEHGPR 37 3 O15069 O15069 NACAD NAC-alpha domain-containing protein 1 1 AHT(0.009)GDGAKPDS(0.987)PQKET(0.004)LEVENQQEGGLKPLAQEHGPR 165.61 1.5632e-10 1420800000.0 670770.0 666070.0 610440.0 728980.0 813090.0 705010.0 669490.0 759190.0 902940.0 600460.0 True False 633561.0509531562 634070.9974085471 649789.9391385341 798262.0400241714 877075.557150739 700609.771079819 737168.5827927449 756556.547086278 738988.8572650806 595140.3915508105 1.0645573043735606 1.06541415506397 1.0918263125198382 1.3413003912304937 1.4737288370988646 1.1772176465021595 1.2386465332521606 1.2712236605464653 1.2417050964049527 1.0 19.182870509752785 -5.174191484140529 6.2747985807115425 1.2660596143267064 1.069763228545215 0.3265882275798315 0.1136367221603055 0.2557250548750386 15.108672935405023 0.030682574187538218 0.05373541747904926 6.695893166831016e-06 5.174191484140529 -0.19629638578149144 AHTMTDDVTFWK ddPTM_KYSE-520_SHP099_60min_R1 2 AHTMTDDVTFWK 12 0 A0A087WVQ6;Q00610-2;Q00610;J3KSQ2 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ; 129.34 0.00012501 1645510000.0 5617500.0 5143000.0 2866300.0 2501200.0 4289100.0 4755400.0 3177700.0 3217300.0 3117200.0 3809400.0 False True 5305886.07679138 4895922.560199612 3051066.284242155 2738913.295986797 4626627.768359271 4725719.784673936 3498932.9273633733 3206139.9372234624 2551195.0582172773 3775651.679668349 1.4052901398090423 1.2967092771199875 0.8080899783928582 0.7254147173415588 1.225385221119145 1.2516302311788041 0.926709671393924 0.8491620014866116 0.6756966146944393 1.0 21.84829424525427 -4.655424097486615 5.547841990215242 0.9423836106703707 1.3759317890606917 0.4638262150092204 0.18073742430702225 0.19237543591529288 8.528260006010223 0.05119172134065007 0.14056198303615153 2.2109346319929014e-05 4.655424097486615 0.433548178390321 AHTPT(ph)PGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_KYSE-520_SHP099_60min_R1 2 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 33 1 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.147)PT(0.853)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;AHT(0.472)PT(0.517)PGIY(0.001)MGRPT(0.008)HS(0.001)GGGGGGGGGGGGGGGGR 141.16 3.1485000000000004e-06 4139550000.0 296940.0 337530.0 350070.0 383690.0 310240.0 247180.0 269430.0 321730.0 392300.0 244500.0 True False 280468.1462647856 321314.5521571409 372636.07233180397 420155.78223939525 334654.12297586445 245637.25793323462 296666.6137834014 320613.9937223464 321068.209078224 242333.9202181218 1.1573623123512369 1.3259165364383558 1.5376967120261116 1.733788575124845 1.3809627751436793 1.0136313468297773 1.2242058953875519 1.3230256558131261 1.3248999924947957 1.0 17.886636831786586 -6.016233508643078 24.773118961469706 1.1999507718764701 1.4526660475278024 0.3447727734068031 0.17192239793883465 827.2940659282183 1262490.8443825499 0.05994741616989655 0.061610678263945874 9.633109375726046e-07 6.016233508643078 0.2527152756513322 AHTPTPGIY(ph)MGRPTHSGGGGGGGGGGGGGGGGR ddPTM_KYSE-520_SHP099_60min_R1 1 AHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 33 1 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 AHT(0.308)PT(0.308)PGIY(0.345)MGRPT(0.038)HS(0.001)GGGGGGGGGGGGGGGGR 64.885 0.014784 2028800000.0 436520.0 381710.0 388170.0 331790.0 333400.0 338190.0 262870.0 278990.0 415520.0 322580.0 True False 412305.36541895365 363372.0786416091 413192.0592939599 363323.22184369934 359636.68321348977 336079.2307647893 289443.464963971 278022.2488067558 340072.0424067895 319722.1921634421 1.2895738097785312 1.1365244188487649 1.2923471357994942 1.1363716086932383 1.1248411653253128 1.0511601602962408 0.9052967609330271 0.8695744481341188 1.0636485384566128 1.0 18.286459360603956 -6.131605386983269 1.3438431099020132 0.9502037048003545 1.2239650951068015 0.7329034819154043 0.06918638288012281 0.21142884343149773 0.7790554529467061 0.030443288623726042 0.030650009283853568 7.385750167887976e-07 6.131605386983269 0.273761390306447 AHTS(ph)PAPAPRPTPR ddPTM_KYSE-520_SHP099_60min_R1 2 AHTSPAPAPRPTPR 14 1 Q96P48-3;Q96P48 Q96P48-3 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 1 AHT(0.23)S(0.77)PAPAPRPTPR;AHT(0.441)S(0.558)PAPAPRPTPR 158.17 1.2327e-07 1955530000.0 632160.0 588490.0 574510.0 479030.0 529670.0 590190.0 522790.0 502440.0 677910.0 593910.0 True False 597092.8246202824 560218.0570585018 611543.8338485004 524556.8671743791 571352.0155899497 586506.4052901355 575638.7151387171 500697.15291037754 554818.6327204141 588648.4194549875 1.0143454138093386 0.9517023040292734 1.0388948880805815 0.8911208283886178 0.9706167496702836 0.9963611315446405 0.9778990244663942 0.8505877810288839 0.942529724676921 1.0 19.16704669091587 AHVDEFK ddPTM_KYSE-520_SHP099_60min_R1 4 AHVDEFK 7 0 E7EUC7;A0A087WYS1;Q16851-2;Q16851 E7EUC7 UGP2 UTP--glucose-1-phosphate uridylyltransferase 0 ;;; 132.09 0.0033214 2624380000.0 4178950.0 3789870.0 2601462.0 2335520.0 3583090.0 3831130.0 2719468.0 3385590.0 3228740.0 3367390.0 False True 3947135.3129697056 3607798.9564891583 2769156.4030063697 2557487.1186003103 3865058.7980066733 3807218.496584484 2994378.364890022 3373846.1784926443 2642482.2059118664 3337557.5443897787 1.182641875225369 1.0809698135553163 0.8296954782580888 0.7662750633016898 1.1580500850100968 1.1407199564196804 0.8971765505356997 1.010872811515674 0.7917413170459668 1.0 21.670361280518396 -4.548333910469999 7.988566573047607 0.955335829488557 1.1580510490405742 0.2611155714112491 0.12760617170917443 0.23781671412079983 61.82809301845042 0.034489116035932146 0.09447706394564125 2.829215896139668e-05 4.548333910469999 0.2027152195520172 AHVVPCFDASK ddPTM_KYSE-520_SHP099_60min_R1 1 AHVVPCFDASK 11 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 96.229 0.0036284999999999998 897590000.0 2180400.0 1739600.0 1490600.0 3441500.0 2191500.0 1429500.0 1595600.0 1827300.0 2358600.0 1212900.0 False True 2059448.8654803613 1656027.0048071651 1586686.461044326 3768579.1252752957 2363958.5820706766 1420577.9602538978 1756898.8195553406 1820961.5227950274 1930337.6954674977 1202154.6496219223 1.7131313896494582 1.3775490577089942 1.3198688384587947 3.1348538446867167 1.966434670293162 1.1816931878944774 1.4614582409242316 1.51474814273498 1.6057315887557304 1.0 20.19719107093984 -6.250547668464625 24.276708847611282 1.3916937409627883 1.9093214328290793 0.23469436277738676 0.49368657669056204 876.5753540289134 1953812.9305191117 0.17622818631056106 0.17445310318208387 5.61632629784036e-07 6.250547668464625 0.517627691866291 AHVVPCFDASKVK ddPTM_KYSE-520_SHP099_60min_R1 2 AHVVPCFDASKVK 13 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 159.64 1.1426e-06 4630500000.0 9217900.0 5190700.0 5683900.0 11889400.0 7380100.0 4025300.0 6455000.0 6659800.0 10528000.0 4282500.0 False True 8706564.711571928 4941330.980600458 6050293.288561541 13019365.00132154 7960871.882975029 4000176.6095907832 7107534.394729086 6636698.708209009 8616380.589282546 4244560.381734579 2.051228850233463 1.1641561283623765 1.4254228340342356 3.0673058763275396 1.8755468569213156 0.9424242441701522 1.6745042490889308 1.5635774052757994 2.0299818625177344 1.0 22.01718370780571 -6.039674592657304 24.871213522237284 1.4826396904311903 1.916048497117712 0.1557374461832821 0.5493125823796925 1145.1742672553153 717884.4128523319 0.1905938214897883 0.19062500395918527 9.126944451750077e-07 6.039674592657304 0.4334088066865218 AIAGDEHKR ddPTM_KYSE-520_SHP099_60min_R1 4 AIAGDEHKR 9 1 M0R196;A0A087WY80;A8MU39;H0YDU8;E7EU14;P53041 M0R196 PPP5D1;PPP5C Serine/threonine-protein phosphatase;Protein PPP5D1;Serine/threonine-protein phosphatase 5 0 ;;; 135.71 0.00097094 3252960000.0 6136300.0 5796100.0 2705060.0 2449320.0 6809100.0 6898900.0 3562640.0 4564540.0 4292440.0 5524900.0 False True 5795907.206589213 5517646.65587653 2879432.49584903 2682102.6363850874 7344937.431520619 6855841.406082983 3922786.419215738 4548706.67611164 3513041.099606756 5475953.684307153 1.058428821850516 1.0076138283800427 0.5258321494027303 0.48979644295958674 1.3413074424952773 1.251990393149284 0.716365887180083 0.8306693113835507 0.6415395933085297 1.0 22.384678813636757 -10.378846702619466 3.8610615835218622 1.0004983190790746 0.8751237373137493 0.01844476241649684 0.2761763280946374 301221594.3651695 954.5363799829709 1336517.8200157548 0.07416787518966071 4.17977878552283e-11 10.378846702619466 -0.12537458176532534 AICDHVR ddPTM_KYSE-520_SHP099_60min_R1 9 AICDHVR 7 0 A0A5K1VW95;P40925;P40925-3;B8ZZ51;B9A041;P40925-2 A0A5K1VW95 MDH1 Malate dehydrogenase, cytoplasmic 0 ;;;;;;;; 167.82 0.0012167999999999999 5803500000.0 6199270.0 5525710.0 4124850.0 3693026.0 6016420.0 5351480.0 4564709.0 5041984.0 4751640.0 4565697.0 False True 5855384.135161643 5260246.597340189 4390744.430993352 4044010.0806912486 6489878.025252866 5318079.428289288 5026154.332986742 5024494.534311908 3888861.955096744 4525248.476638517 1.293936491087709 1.1624216050225928 0.9702769811780416 0.893654812894441 1.4341484359934487 1.175201639367151 1.1106913485379066 1.1103245623418772 0.8593698169664931 1.0 22.1095655805636 -7.663946874793271 5.858988574276261 0.9319503024814537 1.1419381211696054 0.25839531555150086 0.1457223080692384 0.2958191771591678 14.34188691109487 0.10883279249317684 0.03916505112606699 2.167969286113165e-08 7.663946874793271 0.20998781868815164 AICGLT(ph)PGRR ddPTM_KYSE-520_SHP099_60min_R1 2 AICGLTPGRR 10 1 Q02241-2;Q02241-3;Q02241;A0A2U3TZL8;H7BYN4 Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 AICGLT(1)PGRR;AICGLT(1)PGRR 151.26 0.00026168 898130000.0 856850.0 948680.0 821170.0 652600.0 641960.0 813390.0 642720.0 790020.0 1027480.0 977280.0 True False 809318.8224118728 903103.9888022885 874103.932118455 714622.907788655 692478.5997472459 808313.3312982994 707692.4099427235 787279.6050120548 840915.5326629949 968622.0595123356 0.8355362284639006 0.9323595100208301 0.9024200136000754 0.7377726955221735 0.7149110356787483 0.8344981650585724 0.730617688284964 0.812783063611436 0.868156495513187 1.0 19.88557433385648 -5.238411855344425 24.21826803467247 0.7995428062734344 0.8943307019480121 0.13652814341882313 0.08184453730493083 813.8176301280655 855897.2337427137 0.021323056777761504 0.03689686991909981 5.775480803068785e-06 5.238411855344425 0.09478789567457768 AIEALHGHELRPGR ddPTM_KYSE-520_SHP099_60min_R1 2 AIEALHGHELRPGR 14 1 Q96PK6;Q96PK6-2;Q96PK6-5;A0A0A6YYI9;F8WDX3;A0A0A0MSL8;B8ZZ74;Q96PK6-3;Q96PK6-4 Q96PK6 RBM14;RBM14-RBM4 RNA-binding protein 14 0 ; 147.35 3.6222000000000002e-06 1670840000.0 763850.0 802450.0 511360.0 424890.0 693290.0 681370.0 577090.0 630450.0 615870.0 540360.0 False True 721477.7178027758 763899.0974979947 544323.0838049289 465271.4178521637 747847.9787194976 677117.3170886314 635427.8890556475 628263.1160981361 504043.53281928523 535572.8307937186 1.3471141109483584 1.4263216010526463 1.016338119688115 0.8687360356996299 1.3963515991115296 1.2642861589620669 1.1864453394955525 1.1730675642508799 0.9411297658103625 1.0 19.030723250122627 -1.0000000000000002 0.1239672471385624 0.9596576190892028 2.0724945294413684 0.20889725120706615 0.16698860916683517 179.67622504880686 1.5249920236098449 1.1457806188723125 34.689735290667386 0.09999999999999995 1.0000000000000002 1.1128369103521656 AIEPPPLDAVIEAEHTLR ddPTM_KYSE-520_SHP099_60min_R1 3 AIEPPPLDAVIEAEHTLR 18 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ;; 278.72 1.9453999999999998e-30 207345000.0 272399.0 194447.0 144566.0 137738.0 244249.0 188629.0 134223.0 150265.0 171823.0 138664.0 False True 257288.48445605623 185105.47424910247 153884.95567377817 150828.57810756032 263470.0067132923 187451.69644262496 147791.5707302434 149743.7657871147 140624.27450534698 137435.54483895953 1.87206653677209 1.3468529881843907 1.119688184407413 1.0974495592409816 1.9170441461996897 1.3639244248078035 1.0753518742434396 1.0895563150171768 1.0232016373211448 1.0 17.06839564985211 -6.728814172165043 4.530857264405251 1.0507721789561417 1.4422823603646835 0.3812561978587552 0.25468136429646704 0.2497165908184883 11.67946225439583 0.10937728443123919 0.07990045080637476 1.8671784564712654e-07 6.728814172165043 0.39151018140854177 AIEQADLLQEEDES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 AIEQADLLQEEDESPR 16 0 A0A2R8YGH5;H7C1E4;P61966 A0A2R8YGH5 AP1S1 AP-1 complex subunit sigma-1A 1 AIEQADLLQEEDES(1)PR 250.94 1.5444e-23 396660000.0 163720.0 132290.0 99484.0 104400.0 118840.0 147310.0 105560.0 130190.0 150480.0 106330.0 True False 154638.12523227124 125934.5898286618 105896.89782002798 114322.14461099538 128192.03189289497 146390.58364813 116231.03496632095 129738.40127657428 123156.62529210084 105387.99892348833 1.467321960867086 1.194961391382811 1.0048288125947729 1.0847738431203466 1.2163816867417927 1.3890631299908214 1.1028868196909656 1.2310547937319158 1.168601990265633 1.0 16.685351063619315 -8.102807877147837 6.818700525061049 1.000000607052251 1.2021360147423295 0.18904007390447197 0.12996605518298912 3.922111027516221 259.77186542777616 0.13002685803055844 0.033680981828301496 7.89209170139555e-09 8.102807877147837 0.20213540769007854 AIFAGYK ddPTM_KYSE-520_SHP099_60min_R1 2 AIFAGYK 7 0 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 0 ; 114.67 0.02105 1048620000.0 2940100.0 3089800.0 2452500.0 2209900.0 2878700.0 3130300.0 2673500.0 2903200.0 2806000.0 2860100.0 False True 2777006.792055956 2941361.370115644 2610592.0741387415 2419928.231569336 3105237.312437533 3110762.6365741743 2943763.4708455787 2893129.4768119724 2296501.133503685 2834761.739124131 0.9796261723618368 1.0376044411494172 0.9209211617711998 0.8536619491404001 1.0954138647987297 1.0973629965583354 1.038451814209658 1.0205899976997275 0.8101213946161292 1.0 21.434796051500786 -3.9724975393223283 14.567901340929826 0.9901767546238278 0.953116308457425 0.0 0.09166113145186028 81206844.34258546 1249616676.0077379 0.023882209129815066 70138756.47653817 0.00010653748999791235 3.9724975393223283 -0.037060446166402805 AIGALASS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 6 AIGALASSR 9 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 AIGALAS(0.003)S(0.997)R;AIGALAS(0.003)S(0.997)R;AIGALAS(0.004)S(0.996)R;AIGALAS(0.007)S(0.993)R;AIGALAS(0.003)S(0.997)R;AIGALAS(0.019)S(0.981)R 131.52 0.00055341 5489800000.0 11887800.0 11218500.0 11816700.0 10664300.0 10406800.0 9821500.0 8988990.0 10764500.0 11899500.0 10414100.0 True False 11228360.036258219 10679546.420688184 12578423.389388502 11677831.865661304 11225755.953407744 9760200.375399554 9897684.833288275 10727160.4619532 9738850.761984007 10321839.176047198 1.087825516824045 1.034655378614218 1.2186222992679367 1.1313712281780959 1.087573228176057 0.9455873327351408 0.9589070963493391 1.039268320208533 0.9435189403632571 1.0 23.299196721576955 -6.136063262892088 4.531117939999939 0.979174784801905 1.1182495100656382 0.6450625332297972 0.050203206194238806 0.15643121634578144 5.080370732001498 0.017611326409765968 0.017685997647134 7.310325875315599e-07 6.136063262892088 0.1390747252637332 AIGDHFYK ddPTM_KYSE-520_SHP099_60min_R1 2 AIGDHFYK 8 0 O15355 O15355 PPM1G Protein phosphatase 1G 0 ; 109.86 0.0018552 956940000.0 3580300.0 3236300.0 2169000.0 1977320.0 3393600.0 3410600.0 2358830.0 2726500.0 2711400.0 2805300.0 False True 3381693.6218488924 3080823.2902146666 2308817.210522703 2165243.898297064 3660657.013057284 3389313.180302171 2597283.556362323 2717042.407869886 2219078.108831752 2780447.224490375 1.2162408953720456 1.1080315652383395 0.830376203578503 0.7787394341548523 1.3165712986076339 1.2189813028813719 0.934124385992752 0.9771961805057782 0.7981011433290142 1.0 21.40688552301467 -6.955790951710934 24.97680817363284 0.9237208768001945 1.0664020694379155 0.16465617048180037 0.16521688341639315 286.4421513433592 161830.7035460127 0.07591996428288857 0.0511852040715747 1.1071565871898966e-07 6.955790951710934 0.14268119263772094 AIGGEFS(ph)DTNAAVEGTPLPK ddPTM_KYSE-520_SHP099_60min_R1 1 AIGGEFSDTNAAVEGTPLPK 20 0 O75410;O75410-9;O75410-2;O75410-7;O75410-3;E7EVI4;E5RFM9;E7ET87;R4GMT7;H0YAY0;E5RJU4 O75410 TACC1 Transforming acidic coiled-coil-containing protein 1 1 AIGGEFS(0.988)DT(0.012)NAAVEGTPLPK 155.49 4.0964e-07 75742000.0 79451.0 82701.0 97597.0 69799.0 59816.0 80580.0 66785.0 90355.0 105110.0 87293.0 True False 75043.69464835823 78727.9198232683 103888.25878072134 76432.67597416551 64523.178893515615 80077.07033036658 73536.2795587887 90041.57959401564 86024.67360747406 86519.65193292637 0.8673601080426817 0.909942632273896 1.2007475349214285 0.8834140483299597 0.7457632740309296 0.9255362052594207 0.849937302288237 1.0407066785684669 0.9942790069724733 1.0 16.400740240923646 -7.276520297322062 24.043035488632427 1.0131196409988519 0.9159041131186734 0.14857974270502317 0.10920800785118427 1129.7618213207325 1801129.9150529944 0.06382018233876992 0.03087519681585184 5.2902927175511573e-08 7.276520297322062 -0.09721552788017851 AIGGIILTAS(ph)HNPGGPNGDFGIK ddPTM_KYSE-520_SHP099_60min_R1 12 AIGGIILTASHNPGGPNGDFGIK 23 0 A0A3B3ITK7;P36871;P36871-2 A0A3B3ITK7 PGM1 Phosphoglucomutase-1 1 AIGGIILT(0.132)AS(0.868)HNPGGPNGDFGIK;AIGGIILT(0.246)AS(0.754)HNPGGPNGDFGIK;AIGGIILT(0.04)AS(0.96)HNPGGPNGDFGIK;AIGGIILT(0.053)AS(0.947)HNPGGPNGDFGIK;AIGGIILT(0.005)AS(0.995)HNPGGPNGDFGIK;AIGGIILT(0.16)AS(0.84)HNPGGPNGDFGIK;AIGGIILT(0.018)AS(0.982)HNPGGPNGDFGIK;AIGGIILT(0.002)AS(0.998)HNPGGPNGDFGIK;AIGGIILT(0.001)AS(0.999)HNPGGPNGDFGIK;AIGGIILT(0.022)AS(0.978)HNPGGPNGDFGIK;AIGGIILT(0.001)AS(0.999)HNPGGPNGDFGIK;AIGGIILT(0.124)AS(0.876)HNPGGPNGDFGIK 241.22 1.6821999999999998e-28 13706146000.0 6177143.0 6290762.0 5084534.0 3909399.0 3725806.0 5432297.0 3975204.0 5119804.0 5677665.0 5642886.0 True False 5834484.563960717 5988544.350893736 5412291.197182039 4280947.105556334 4019005.735263705 5398392.019414738 4377056.414572362 5102044.594895236 4646744.15828731 5592894.420138881 1.043195906390065 1.0707415339953852 0.9677084512258043 0.7654260538410148 0.7185913828074563 0.9652233019054 0.7826102346597976 0.912236886954956 0.8308299440724869 1.0 22.41516366542994 -5.025087709417256 4.478033164656934 0.8462964120581918 1.0519988933968891 0.4927072769536268 0.08364257783056651 0.15194152413643353 7.429972104456947 0.02229846662422718 0.043533127891943246 9.438702345164737e-06 5.025087709417256 0.20570248133869729 AIGLS(ph)PMSFPTADLTLK ddPTM_KYSE-520_SHP099_60min_R1 2 AIGLSPMSFPTADLTLK 17 0 Q5JSZ5;Q5JSZ5-5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 AIGLS(1)PMSFPTADLTLK;AIGLS(0.947)PMS(0.053)FPT(0.001)ADLTLK 297.49 7.575499999999999e-38 249360000.0 164298.0 228350.0 183311.0 151007.0 151522.0 187610.0 124685.0 180329.0 227249.0 187447.0 True False 155184.062420057 217379.7232396622 195127.5203679704 165358.65987808997 163445.91935775182 186439.05639960387 137289.37660833396 179703.4807881049 185986.31008110437 185786.3654115594 0.8352822989797378 1.170052079753626 1.0502790123253565 0.8900473374985436 0.8797519613222511 1.0035131264159165 0.7389636817761438 0.9672587134692069 1.0010762074445132 1.0 17.50328510277252 -5.257929218229713 24.313546218451297 0.9179716889925228 1.0336892336035461 0.1275347823362427 0.10765746578709587 340.05774025601664 2355434.2026530905 0.02879686138948185 0.04742466894663119 5.521674247737715e-06 5.257929218229713 0.11571754461102335 AIGS(ph)SPLGSGEGLLGLS(ph)PGPNGHSHLLK ddPTM_KYSE-520_SHP099_60min_R1 4 AIGSSPLGSGEGLLGLSPGPNGHSHLLK 28 0 A0A087WZ13;Q8IY67-2;E9PAU2;Q8IY67;K7EQG2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 2 AIGS(0.496)S(0.496)PLGS(0.009)GEGLLGLS(0.934)PGPNGHS(0.066)HLLK;AIGS(0.496)S(0.496)PLGS(0.008)GEGLLGLS(0.972)PGPNGHS(0.028)HLLK;AIGS(0.5)S(0.5)PLGSGEGLLGLS(1)PGPNGHSHLLK;AIGS(0.5)S(0.5)PLGS(0.001)GEGLLGLS(1)PGPNGHSHLLK 273.01 1.6029999999999998e-41 423886000.0 371529.0 388717.0 346063.0 378468.0 349812.0 321606.0 303456.0 322862.0 428407.0 309238.0 True False 350919.5457453 370042.4518438878 368370.7747003773 414437.4849294466 377340.2142419838 319598.7376603113 334132.29392516025 321742.067078557 350619.0880616224 306498.39190352306 1.144931115513844 1.207322653622165 1.2018685397094349 1.3521685459932191 1.2311327700562935 1.0427419722349207 1.090160022863466 1.0497349270916638 1.1439508242900904 1.0 18.225519979025304 -6.255213069188236 24.348246871430852 1.0699786345143054 1.231868379267023 0.6489066845594693 0.05954919870728095 232.80322533324104 910387.5916322931 0.020475335909408254 0.0199665826749777 5.556315920095961e-07 6.255213069188236 0.16188974475271767 AIGSDT(ph)SDIVHIWCPEGMK ddPTM_KYSE-520_SHP099_60min_R1 6 AIGSDTSDIVHIWCPEGMK 19 0 Q09GN1;Q71F23-3;Q71F23 Q09GN1 MLF1IP;CENPU Centromere protein U 1 AIGS(0.11)DT(0.445)S(0.445)DIVHIWCPEGMK;AIGS(0.007)DT(0.497)S(0.497)DIVHIWCPEGMK;AIGS(0.003)DT(0.499)S(0.499)DIVHIWCPEGMK;AIGSDT(0.5)S(0.5)DIVHIWCPEGMK;AIGS(0.003)DT(0.499)S(0.499)DIVHIWCPEGMK;AIGS(0.001)DT(0.499)S(0.499)DIVHIWCPEGMK 239.1 5.994e-26 1523730000.0 1992540.0 2053140.0 1976520.0 2051260.0 1931570.0 1912430.0 1876620.0 1968670.0 2384490.0 2244760.0 True False 1882009.834169986 1954504.072574033 2103929.6417438146 2246211.1336661926 2083573.569870069 1900493.814990111 2066327.0636462434 1961841.1432610336 1951526.7241012834 2224873.172796854 0.8458953333524807 0.8784788708279744 0.9456402582709903 1.0095906414487956 0.9364909404030616 0.8542032140200735 0.9287392597973103 0.8817766186621925 0.8771406604035992 1.0 21.085291668013525 AIGSTSKPQES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 12 AIGSTSKPQESPK 13 1 P18887;F5H8D7;M0QYS5 P18887 XRCC1 DNA repair protein XRCC1 1 AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGSTSKPQES(1)PK;AIGST(0.003)S(0.084)KPQES(0.913)PK 251.05 6.251800000000001e-25 76447610000.0 62056750.0 53957970.0 51780090.0 46816040.0 50395260.0 50967830.0 48131320.0 49284780.0 57450100.0 49205270.0 True False 58614338.37043588 51365748.128635824 55117917.45247323 51265422.36584427 54361080.25219389 50649720.867413364 52996903.542015694 49113822.60133412 47018610.03916607 48769349.58892073 1.2018683633162848 1.0532383261536244 1.1301753645899504 1.0511811783007783 1.114656658544888 1.038556414927457 1.0866846490414417 1.0070633095441495 0.9641016424350186 1.0 25.539471396251184 -1.0000000000013194 0.16193358645207395 0.9647017438578159 1.720145527209016 0.6031548539095024 0.04212090314368082 44.47919672317512 0.4641083213242875 0.11992282180165616 8.041185311849171 0.09999999999969619 1.0000000000013194 0.7554437833512001 AIGSTSKPQES(ph)PKGK ddPTM_KYSE-520_SHP099_60min_R1 2 AIGSTSKPQESPKGK 15 2 P18887;F5H8D7;M0QYS5 P18887 XRCC1 DNA repair protein XRCC1 1 AIGSTS(0.005)KPQES(0.995)PKGK;AIGSTSKPQES(1)PKGK 229.46 4.7637e-15 7117100000.0 9383000.0 9418600.0 9852500.0 6798800.0 7702600.0 8241400.0 6704200.0 5955400.0 10836700.0 7547100.0 True False 8862506.285453238 8966116.31839317 10487607.914557379 7444955.907866242 8308750.798201049 8189962.365607896 7381925.962686706 5934742.107400815 8869028.450976254 7480238.565554944 1.1847892560891533 1.1986404230047432 1.4020419031621252 0.9952832175899882 1.1107601349054887 1.0948798348920439 0.9868570230739768 0.7933894160447179 1.1856611755427722 1.0 22.834652851717113 -5.281379059697979 24.910576129140875 1.0202657694387605 1.2555055220742508 0.48826186828064 0.11155417585397097 644.7435225921779 805474.4179744262 0.0318896636586372 0.04736467517968425 5.231436284975561e-06 5.281379059697979 0.23523975263549035 AIGTEPDSDVLSEIMHSFAK ddPTM_KYSE-520_SHP099_60min_R1 2 AIGTEPDSDVLSEIMHSFAK 20 0 H0Y8C6;O00410-2;O00410;O00410-3 H0Y8C6 IPO5 Importin-5 0 ; 201.37 3.6181999999999997e-13 50091000.0 129068.0 122484.0 91819.0 114487.0 124119.0 121674.0 96713.0 93082.0 103469.0 78270.0 False True 121908.34074932072 116599.68478776781 97737.79965559428 125367.81005822838 133886.4591594934 120914.58743332133 106489.69386792148 92759.12026750206 84681.6378412305 77576.58869313849 1.571457868965348 1.5030267088565707 1.2598878257228525 1.6160521127595926 1.7258616473726873 1.5586479048674127 1.3727040033836948 1.1957102243103201 1.091587542940264 1.0 16.243333716598233 -7.291574112115175 1.662545596088392 1.0405462144467035 1.5359666531499194 0.75938391675431 0.11337113018000158 0.21647310101564315 1.081040561834041 0.09999559648649516 0.03809842668726189 5.1100586872513825e-08 7.291574112115175 0.49542043870321595 AIHSWLTR ddPTM_KYSE-520_SHP099_60min_R1 2 AIHSWLTR 8 0 P28070 P28070 PSMB4 Proteasome subunit beta type-4 0 ; 133.12 0.0012982 1216080000.0 877780.0 839420.0 634720.0 579010.0 969000.0 754120.0 660940.0 604930.0 623680.0 591050.0 False True 829087.7935889509 799093.0032048922 675635.0667879079 634038.9363142963 1045254.7871441856 749413.2573533886 727754.2653527863 602831.639021724 510435.4336933638 585813.7568299412 1.4152753907239344 1.3640734685526767 1.153327416624737 1.0823216917016762 1.7842783221760665 1.27926879254039 1.242296304700898 1.029049987292673 0.8713271543084309 1.0 19.160082547267095 -7.229497198928741 2.1972975512294 0.9355576723913747 1.3439820136645257 0.4805456514908327 0.17816801988057393 0.3032940412557139 2.7858271632057074 0.1251951305902194 0.05416034385585377 5.895257793205518e-08 7.229497198928741 0.4084243412731511 AIIEEYLHLNDMK ddPTM_KYSE-520_SHP099_60min_R1 2 AIIEEYLHLNDMK 13 0 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ; 186.13 5.1094999999999995e-08 409950000.0 614950.0 484630.0 322500.0 329480.0 586950.0 469350.0 345380.0 386960.0 358420.0 308340.0 False True 580837.497627567 461347.64735553955 343288.8660182446 360793.68013822625 633139.6257113308 466420.61255345755 380294.3809839706 385617.7260771432 293339.96303292597 305608.34748489 1.9005943470058029 1.509604207975208 1.1232967582314406 1.1805753445791094 2.071735379357184 1.5262037715658878 1.2443847954865606 1.2618036426384232 0.9598558594589088 1.0 18.221324424585937 -7.248952862306834 1.5460702319934938 1.003366946508619 1.5304181881984469 0.3887843910632858 0.27603182114770936 0.5036723859435361 2.1738379737161773 0.23501812409755551 0.09167410460317126 5.6369883555973865e-08 7.248952862306834 0.5270512416898279 AILPHAGLLR ddPTM_KYSE-520_SHP099_60min_R1 1 AILPHAGLLR 10 0 Q6ZRM9 Q6ZRM9 Putative uncharacterized protein FLJ46235 0 76.47800000000001 0.031329 461050000.0 264980.0 228950.0 1697700.0 86902.0 575810.0 246550.0 305040.0 154440.0 1100800.0 377030.0 False True 250281.03117546593 217950.89833904372 1807136.458416042 95161.13995196098 621122.9710892604 245011.18999692093 335876.42010351043 153904.28368656684 900922.4689097854 373689.8075249011 0.6697561082363432 0.5832401471761319 4.835926541281493 0.25465275754308564 1.6621351682113283 0.6556539275709157 0.898810760529317 0.41185036516231793 2.410883173070627 1.0 18.51148168885439 AILQS(ph)WTDNER ddPTM_KYSE-520_SHP099_60min_R1 1 AILQSWTDNER 11 0 Q9H6S1 Q9H6S1 AZI2 5-azacytidine-induced protein 2 1 AILQS(0.896)WT(0.104)DNER 68.46300000000001 0.026565 93895000.0 129540.0 123520.0 112520.0 85428.0 103780.0 97630.0 108430.0 124380.0 131990.0 113550.0 True False 122354.15796841204 117585.9137927 119773.21923836539 93547.0514351352 111946.89557257353 97020.65495599019 119391.16257482166 123948.55481051018 108023.94319713154 112544.03534056318 1.0871669706720841 1.0447991618292332 1.0642342695099423 0.8312039918602326 0.9946941677879003 0.8620683864977957 1.0608395390616552 1.1013338417752343 0.9598371239332796 1.0 16.780130072653876 -10.07550840715733 13.809830364271047 1.00000000327226 0.9993442857969975 0.0 0.0876763855506909 0.0 0.0 0.08808062720705473 0.021362689973255262 8.404107381074042e-11 10.07550840715733 -0.0006557174752624961 AILVDLEPGTMDSVR ddPTM_KYSE-520_SHP099_60min_R1 1 AILVDLEPGTMDSVR 15 0 A0A0B4J269;Q13509;G3V5W4;G3V2R8;G3V3R4;G3V2N6;Q5JP53;P07437;Q9BVA1;Q13885 A0A0B4J269;Q5JP53 TUBB3;TUBB;TUBB2B;TUBB2A Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain 0 135.99 0.0027248000000000003 0.0 77465.0 93241.0 94893.0 48901.0 86436.0 83193.0 73740.0 67955.0 97949.0 94730.0 False True 73167.86202735103 88761.56240240575 101009.95461416837 53548.536337378246 93238.02144643423 82673.76162812348 81194.35883304768 67719.27996581618 80163.93069335446 93890.76589882486 0.7792870931119629 0.9453705223584367 1.0758241627618101 0.5703280383832555 0.993047831209578 0.8805313369923019 0.8647746991492367 0.7212560182839425 0.8537999442856584 1.0 16.518695656203196 AIMDKK ddPTM_KYSE-520_SHP099_60min_R1 1 AIMDKK 6 1 P13639 P13639 EEF2 Elongation factor 2 0 86.086 0.033173 466910000.0 375800.0 396000.0 236460.0 218870.0 391100.0 360300.0 251500.0 285370.0 351260.0 382710.0 False True 354953.6248612732 376975.565591882 251702.58994937708 239671.3389943352 421877.3449453984 358051.23405350087 276924.0744034648 284380.11807585857 287480.0385440142 379319.4871438746 0.9357642749491553 0.9938207193897646 0.6635635618001011 0.6318455737641254 1.1121952845659673 0.9439305023569571 0.7300549636629358 0.7497113323049343 0.7578836529296846 1.0 18.533053964929106 -6.765764929677403 24.975011489414182 0.7885551099461695 0.8747629478290859 0.04152352553369232 0.1527249232311169 362.07399086684507 2090521.7149017726 0.06619663942811434 0.046385241201601486 1.7148852713037786e-07 6.765764929677403 0.08620783788291642 AIMTYVSSFYHAFSGAQK ddPTM_KYSE-520_SHP099_60min_R1 2 AIMTYVSSFYHAFSGAQK 18 0 P12814-3;P12814;P12814-2;P12814-4;H9KV75;G3V2N5;G3V2W4;O43707 P12814-3;O43707 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 0 ; 210.02 4.4356e-14 44858000.0 137897.0 134979.0 110060.0 232000.0 124187.0 145009.0 108025.0 124732.0 86206.0 37275.0 False True 130247.57851914581 128494.4062323903 117154.64370222639 254049.21024665635 133959.81037262638 144103.94504264247 118945.2212224026 124299.33380466772 70553.16347641441 36944.77249951116 3.525467060891205 3.478013194805585 3.1710749796544704 6.876458915805149 3.625947632358513 3.900523275506683 3.2195413092333007 3.3644633704622873 1.9096927306115623 1.0 15.17308262423043 -7.746072859837843 0.9687505008002423 0.9814915504977586 4.136635475705845 0.514190871277733 0.9973658381893877 0.4382606133828048 0.864734527288805 0.9745763211762554 0.3441033151089512 1.7944325568484263e-08 7.746072859837843 3.155143925208087 AINGPTSAS(ph)GDDISK ddPTM_KYSE-520_SHP099_60min_R1 2 AINGPTSASGDDISK 15 0 B4DXZ6;P51114-3;P51114;H7C4S4 B4DXZ6 FXR1 Fragile X mental retardation syndrome-related protein 1 1 AINGPTS(0.002)AS(0.998)GDDISK;AINGPTS(0.121)AS(0.879)GDDISK 279.12 6.2889e-26 955860000.0 598010.0 583160.0 511530.0 442080.0 481260.0 519750.0 473790.0 531810.0 708970.0 542020.0 True False 564837.1931966201 555144.1182589948 544504.0422769388 484095.15028380085 519132.4240051718 516506.04745852674 521685.3169448015 529965.2752353876 580238.9196792971 537218.1244851785 1.0514112749600717 1.033368185019809 1.0135623082313956 0.9011147022407594 0.9663345303225978 0.961445684569 0.9710865906557745 0.9864992469181092 1.080080684610829 1.0 19.0351484531854 -10.046977669049204 12.065089821536995 1.0000023691609943 0.9919994600969588 0.0 0.048769104120752894 0.0 0.0 0.05017293492578555 0.012168724132132661 8.974749405015059e-11 10.046977669049204 -0.008002909064035446 AIPELDAYEAEGLALDDEDVEELTAS(ph)QR ddPTM_KYSE-520_SHP099_60min_R1 9 AIPELDAYEAEGLALDDEDVEELTASQR 28 0 P49736;C9J013;C9JZ21;F8WDM3;H7C4N9 P49736 MCM2 DNA replication licensing factor MCM2 1 AIPELDAYEAEGLALDDEDVEELTAS(1)QR;AIPELDAYEAEGLALDDEDVEELT(0.01)AS(0.99)QR;AIPELDAYEAEGLALDDEDVEELTAS(1)QR;AIPELDAYEAEGLALDDEDVEELT(0.031)AS(0.969)QR;AIPELDAYEAEGLALDDEDVEELTAS(1)QR;AIPELDAYEAEGLALDDEDVEELT(0.022)AS(0.978)QR;AIPELDAYEAEGLALDDEDVEELTAS(1)QR;AIPELDAYEAEGLALDDEDVEELT(0.003)AS(0.997)QR;AIPELDAYEAEGLALDDEDVEELT(0.004)AS(0.996)QR 221.72 1.0941e-22 948594000.0 374696.0 498100.0 340320.4 303200.89999999997 316453.2 405583.4 305606.7 406331.0 500043.0 436823.0 True False 353910.86594204226 474170.52833665704 362257.99751589214 332017.0223753252 341356.266467592 403052.0035570763 336500.4076699695 404921.5325993685 409247.79625822656 432953.088063151 0.817434672946415 1.0952007074436065 0.8367142018468587 0.7668660451427404 0.7884370752375864 0.9309368951730095 0.7772214056153982 0.9352549820370059 0.9452474356725994 1.0 18.723851186951915 -7.498536321572974 17.787757073100444 0.9618348552573258 0.8631805478143599 0.20580611439142915 0.09230449325522858 34.69476532075377 25357.283920373684 0.05346382193236379 0.02519960271512353 3.172953287510738e-08 7.498536321572974 -0.09865430744296588 AIPGDQHPES(ph)PVHTEPMGIQGR ddPTM_KYSE-520_SHP099_60min_R1 5 AIPGDQHPESPVHTEPMGIQGR 22 0 Q14676;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 AIPGDQHPES(0.987)PVHT(0.013)EPMGIQGR;AIPGDQHPES(0.999)PVHT(0.001)EPMGIQGR;AIPGDQHPES(0.996)PVHT(0.004)EPMGIQGR;AIPGDQHPES(0.992)PVHT(0.008)EPMGIQGR;AIPGDQHPES(1)PVHTEPMGIQGR 158.2 1.8485e-08 2599790000.0 2278532.0 2081196.0 1903531.0 1767960.0 1846550.0 2018980.0 1877633.0 2026073.0 2464305.0 2009028.0 True False 2152137.287819066 1981212.2202211148 2026235.6540172852 1935986.3868434438 1991862.979567695 2006378.7969173938 2067442.4675721691 2019045.0256519925 2016849.332073699 1991229.5749201346 1.0808082176588731 0.9949692617942251 1.0175801321645972 0.9722567458958586 1.0003180972478203 1.0076079735797752 1.0382742872102486 1.0139689823223792 1.0128663000370473 1.0 20.925228132675482 AIPPERHS(ph)PHHLK ddPTM_KYSE-520_SHP099_60min_R1 1 AIPPERHSPHHLK 13 1 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J7T7;A0A384DVL6 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 AIPPERHS(1)PHHLK 72.433 0.013212999999999999 594130000.0 598510.0 430700.0 498730.0 444960.0 449390.0 437600.0 409400.0 393660.0 551540.0 354000.0 True False 565309.457199895 410008.5255061195 530878.9337962142 487248.86461789755 484754.4363206666 434868.7760805218 450786.14735896 392294.48534093477 451394.2391919539 350863.83540783275 1.6111932896783097 1.1685687840399364 1.5130625622305522 1.388712131164887 1.3816027398697381 1.2394231955397867 1.2847894307345207 1.1180818475775491 1.2865225584371438 1.0 18.42055172691735 -7.258094041134677 0.13898261306499315 0.7958231799434226 1.6859671038831547 0.563671112231017 0.11464149524707655 4.087968197657219 0.558759817110278 1.4748726738337221 1.6428288531218302 5.519579066357734e-08 7.258094041134677 0.8901439239397322 AIPVS(ph)PSAVEEDEDEDGHTVVATAR ddPTM_KYSE-520_SHP099_60min_R1 4 AIPVSPSAVEEDEDEDGHTVVATAR 25 0 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 AIPVS(0.842)PS(0.158)AVEEDEDEDGHTVVATAR;AIPVS(0.5)PS(0.5)AVEEDEDEDGHTVVATAR;AIPVS(0.958)PS(0.042)AVEEDEDEDGHTVVATAR;AIPVS(0.983)PS(0.017)AVEEDEDEDGHTVVATAR 299.66 3.4534000000000005e-49 8333300000.0 1298920.0 1658980.0 1417940.0 859940.0 1187010.0 1388610.0 1186320.0 1420330.0 1685510.0 1625610.0 True False 1226866.3182671764 1579280.1106202528 1509342.6811842152 941668.4390496109 1280420.9338369663 1379943.1699112754 1306244.802967467 1415403.2067375148 1379463.8722493933 1611208.3601054433 0.7614572693670022 0.9801836619795711 0.9367768431175707 0.5844485805597388 0.7946960588965483 0.8564647528398915 0.810723699870811 0.8784731024141941 0.8561672756955632 1.0 20.61971164353832 -8.38374702646433 0.8816308242642628 0.9999110329410067 0.8202880070712981 0.21948737185641776 0.10098686742062532 2.1966980943037115 3.004730109408865 0.10542121301567227 0.03525967688712906 4.1328816939354724e-09 8.38374702646433 -0.17962302586970857 AIPVSPS(ph)AVEEDEDEDGHTVVATAR ddPTM_KYSE-520_SHP099_60min_R1 1 AIPVSPSAVEEDEDEDGHTVVATAR 25 0 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 AIPVS(0.164)PS(0.836)AVEEDEDEDGHTVVATAR 117.33 0.00018412 3979300000.0 162780.0 179420.0 224520.0 103560.0 105900.0 179030.0 130080.0 172650.0 213330.0 179290.0 True False 153750.26890611488 170800.3938850896 238992.91844470135 113402.31126355064 114233.72751142351 177912.60736219338 143229.75585845977 172051.11744681274 174594.64961166834 177701.63008550933 0.8652158611720717 0.9611639116810641 1.344911233114175 0.6381613449971274 0.6428400654313339 1.0011872557195032 0.8060126167077825 0.9682022464511013 0.9825157457905933 1.0 17.43909738993674 -5.276855791163556 24.993683603073634 0.8556250192904015 1.0475037419032278 0.21067693644731422 0.1717473119182537 1292.7698651008998 2095885.527369093 0.050218537792510155 0.07479746060923011 5.286207528044543e-06 5.276855791163556 0.19187872261282635 AIS(ph)PTSATSSGR ddPTM_KYSE-520_SHP099_60min_R1 2 AISPTSATSSGR 12 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3 A0A087WY00 MYO5A Unconventional myosin-Va 1 AIS(0.987)PT(0.01)S(0.003)ATSSGR;AIS(0.976)PT(0.018)S(0.006)ATSSGR 179.8 6.6002e-07 1063200000.0 741010.0 815400.0 635950.0 563950.0 569050.0 775970.0 572380.0 702910.0 879030.0 784590.0 True False 699904.698133188 776226.9600596484 676944.354555977 617547.6384422504 613830.9975483989 771126.8833985443 630241.7562904775 700471.7692704279 719420.3105430303 777639.1430017824 0.9000378960239451 0.9981840125270922 0.8705121914811141 0.7941313705717551 0.7893519803786317 0.9916256021036955 0.8104552888858797 0.9007671174659766 0.9251338709185597 1.0 19.568741314256624 -8.064632944734111 2.04090126322459 0.9993953644353714 0.8801245920750258 0.2189718767334521 0.06900524673237214 0.6459832482768784 6.018171802265119 0.06905088990903538 0.019231265578635547 8.61721751026159e-09 8.064632944734111 -0.11927077236034556 AIS(ph)SANLLVR ddPTM_KYSE-520_SHP099_60min_R1 7 AISSANLLVR 10 0 G3V1D0;B7WPE2;H0Y3M3;Q32P44;Q32P44-2 G3V1D0 EML3 Echinoderm microtubule-associated protein-like 3 1 AIS(0.77)S(0.23)ANLLVR;AIS(0.8)S(0.2)ANLLVR;AIS(0.5)S(0.5)ANLLVR;AIS(0.925)S(0.075)ANLLVR;AIS(0.5)S(0.5)ANLLVR;AIS(0.963)S(0.037)ANLLVR;AIS(0.978)S(0.022)ANLLVR 173.04 3.6655e-05 3659763000.0 2797030.0 3444070.0 2765760.0 2693790.0 2920740.0 2805920.0 2921080.0 3216900.0 3724860.0 3279290.0 True False 2641873.17015893 3278611.7075455394 2944045.314972465 2949806.9916825043 3150585.6212626547 2788407.212476825 3216371.273393531 3205741.324730103 3048519.32007931 3250238.04184901 0.8128245181254506 1.0087297192793878 0.905793753277727 0.9075664470422617 0.9693399623955958 0.8579086136382008 0.9895802190425987 0.9863097051520591 0.9379372466962618 1.0 21.632113951840335 -1.000000000173747 0.08992406283728789 1.0440264371973362 0.6283802994781025 0.24347487861615935 0.054226446823985607 251.11095976744335 1.6274133371387973 0.9850811402324702 12.876887250350944 0.09999999995999327 1.000000000173747 -0.41564613771923375 AIS(ph)SDMFFGR ddPTM_KYSE-520_SHP099_60min_R1 10 AISSDMFFGR 10 0 Q8N6H7;H0YDN9;A0A0D9SF70;G5E9L0;Q8N6H7-3;Q8N6H7-2;E9PMU9 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 AIS(0.949)S(0.051)DMFFGR;AIS(0.939)S(0.061)DMFFGR;AIS(0.943)S(0.057)DMFFGR;AIS(0.991)S(0.009)DMFFGR;AIS(0.989)S(0.011)DMFFGR;AIS(0.5)S(0.5)DMFFGR;AIS(0.838)S(0.162)DMFFGR;AIS(0.993)S(0.007)DMFFGR;AIS(0.727)S(0.273)DMFFGR;AIS(0.816)S(0.184)DMFFGR 231.05 3.1404000000000003e-10 1996456000.0 1774520.0 1863720.0 1867263.0 1684145.0 2031190.0 1702194.0 1788418.0 1890176.0 2276290.0 2006465.0 True False 1676083.838182081 1774184.0936992455 1987629.7607064361 1844205.6344433415 2191033.097109803 1691569.9758491942 1969208.7447176767 1883619.4206263942 1862973.1166012504 1988689.2811061498 0.842808302989298 0.8921374045483907 0.999467226776058 0.9273472995326633 1.1017473257014316 0.8505954107161016 0.990204333792337 0.9471662760603238 0.9367844108683617 1.0 20.923386452019116 -4.580101155610438 4.338212937980012 0.9668268914299065 0.8519754640202699 0.3184632695232036 0.061220204269435224 0.21717092215781905 8.203906960222858 0.015003743725611451 0.04645589492280569 2.629655422793497e-05 4.580101155610438 -0.11485142740963661 AIS(ph)TGSLASSTLNK ddPTM_KYSE-520_SHP099_60min_R1 5 AISTGSLASSTLNK 14 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 AIS(0.811)T(0.184)GS(0.004)LASSTLNK;AIS(0.958)T(0.042)GSLASSTLNK;AIS(0.99)T(0.01)GSLASSTLNK;AIS(0.907)T(0.093)GSLASSTLNK;AIS(0.997)T(0.003)GSLASSTLNK 255.28 1.8756e-19 1782790000.0 3069380.0 3650140.0 2500930.0 2225180.0 2498150.0 3105080.0 2389410.0 3012800.0 3549770.0 3118480.0 True False 2899115.372742662 3474781.79542816 2662143.949429479 2436660.4381752373 2694740.192470848 3085700.0439490546 2630954.8811943647 3002349.299992805 2905221.250419595 3090852.693340725 0.9379662055680742 1.1242146230115122 0.8612975814619366 0.7883457026033781 0.8718436172246884 0.9983329359555789 0.8512068164434964 0.9713660267476993 0.939941672626109 1.0 21.559573467890758 -9.68384337436732 14.115321939399626 1.000032185453999 0.9264750857490915 0.05723121304654655 0.08864017763983693 0.0 0.0 0.09051051664067514 0.021952024725807567 2.0708880671724808e-10 9.68384337436732 -0.07355709970490754 AIS(ph)TPET(ph)PLTKR ddPTM_KYSE-520_SHP099_60min_R1 1 AISTPETPLTKR 12 1 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 2 AIS(0.5)T(0.5)PET(0.991)PLT(0.009)KR 78.191 0.014525 448040000.0 704120.0 655750.0 613580.0 475270.0 504270.0 515610.0 445850.0 429910.0 684600.0 528000.0 True False 665061.0599715797 624246.7856991824 653132.3485627106 520439.5179048638 543953.1800961798 512391.886734182 490920.8690766784 428418.74255174794 560293.8973615904 523322.3307777837 1.2708440302616897 1.192853331466671 1.248049834968819 0.9944913245558711 1.0394228338923235 0.9791133620700718 0.9380850772162753 0.8186517512352549 1.0706477908727074 1.0 18.997340296192803 -5.351747796503878 1.4242076048541734 0.9539518756999703 1.254189902608174 0.7362546308702818 0.06991269917144868 0.21085935254458374 0.8390936114860865 0.02338061406671328 0.0496927244169168 4.448895487307433e-06 5.351747796503878 0.30023802690820367 AIS(ph)TPETPLTK ddPTM_KYSE-520_SHP099_60min_R1 3 AISTPETPLTK 11 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 AIS(0.499)T(0.499)PET(0.003)PLTK;AIS(0.5)T(0.5)PETPLTK;AIS(0.5)T(0.5)PETPLTK 200.76 3.2599e-07 3494510000.0 6028370.0 7554950.0 5161860.0 4379570.0 4988740.0 7120120.0 5025720.0 6180590.0 7070580.0 6669490.0 True False 5693964.298842341 7191998.861788856 5494601.754868017 4795803.01603426 5381325.455952206 7075680.690005586 5533768.823900515 6159150.975850558 5786740.906816991 6610403.507384698 0.8613641046997248 1.0879818234627339 0.8312051977961432 0.725493233609221 0.8140691335923066 1.0703855947826955 0.8371302625805763 0.9317360080923909 0.8753990433946178 1.0 22.656306907673674 AIST(ph)GSLASSTLNK ddPTM_KYSE-520_SHP099_60min_R1 1 AISTGSLASSTLNK 14 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 AIS(0.069)T(0.93)GS(0.001)LASSTLNK 274.44 1.9176e-24 607290000.0 557710.0 639770.0 398640.0 375700.0 398750.0 533240.0 418920.0 511430.0 590230.0 478670.0 True False 526772.7145326787 609034.4888856515 424336.97224655224 411406.41504167626 430129.35642285296 529911.8513646658 461268.5218652064 509655.9686986597 483059.1104874841 474429.3561996252 1.1103290883016714 1.28372007534329 0.8944155050725916 0.8671605364752538 0.9066246656159023 1.116945746379352 0.9722596543353842 1.0742504906973174 1.018189756125099 1.0 18.855833756524113 -4.761349069777953 24.999999999648796 0.9816707167506993 1.1970245971645463 0.515522385455373 0.08367722561859858 1.8876639448134869 521729.97503705765 0.023077984418043297 0.053677592661119204 1.7324109903806564e-05 4.761349069777953 0.21535388041384707 AIST(ph)PET(ph)PLTK ddPTM_KYSE-520_SHP099_60min_R1 1 AISTPETPLTK 11 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 2 AIS(0.001)T(0.999)PET(1)PLTK 212.68 3.0543e-06 0.0 919800.0 782390.0 692710.0 719520.0 755270.0 672590.0 684740.0 763900.0 873340.0 727050.0 True False 868776.8604241577 744802.8100086681 737363.194975188 787902.9644684234 814705.4521015369 668392.1163254075 753960.2016184032 761250.2091956 714763.4711098039 720608.9026363406 1.2056149420937572 1.0335742554439924 1.023250187830808 1.0933849992497846 1.1305792214347408 0.9275379666835943 1.046282107895208 1.056398562952211 0.9918882052315046 1.0 19.458856949834544 -6.240892513617011 24.997456841061837 1.0105625628229653 1.0894122352456153 0.38641730151654663 0.057826537397056066 1049.1573232263902 1276413.3993660472 0.01936725377254243 0.019344254952595823 5.742585716321716e-07 6.240892513617011 0.07884967242264995 AIST(ph)PET(ph)PLTKR ddPTM_KYSE-520_SHP099_60min_R1 1 AISTPETPLTKR 12 1 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 2 AIS(0.065)T(0.935)PET(0.997)PLT(0.003)KR 99.069 0.0011162000000000001 320090000.0 902240.0 867000.0 822600.0 629560.0 654690.0 694870.0 527590.0 590050.0 926400.0 687190.0 True False 852190.9486291504 825348.018606468 875626.1122065353 689393.1931158841 706210.3783234541 690533.0585810605 580923.9459822022 588003.2542687056 758189.1126435545 681102.0312257292 1.251194255133148 1.2117832288961905 1.2856019686664795 1.0121731568987307 1.0368642963118746 1.0138467174123076 0.8529176530816626 0.8633115558479828 1.113179931763083 1.0 19.37751140911662 -5.342502941471841 4.169979545430626 0.9727486449683804 1.2461895011012678 0.7236933499483862 0.07494375237946319 0.1218519576326389 3.9371235542154968 0.0227693026553353 0.03518898237822768 4.5446145913652505e-06 5.342502941471841 0.2734408561328874 AIST(ph)PETPLTK ddPTM_KYSE-520_SHP099_60min_R1 5 AISTPETPLTK 11 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 1 AIS(0.002)T(0.998)PETPLTK;AIS(0.007)T(0.99)PET(0.004)PLTK;AIS(0.058)T(0.942)PETPLTK;AIS(0.019)T(0.981)PETPLTK;AIS(0.029)T(0.969)PET(0.002)PLTK 228.93 1.0042000000000001e-09 3031250000.0 7955110.0 9972240.0 7057940.0 5972650.0 6603070.0 9744000.0 6826840.0 8208940.0 9517580.0 8962600.0 True False 7513824.190181365 9493158.621762587 7512906.105503285 6540288.860257295 7122694.042670967 9683184.08164671 7516963.610737763 8180465.103121004 7789427.390667148 8883198.336797295 0.8458467215638419 1.0686644901801443 0.8457433708737783 0.7362538369953021 0.8018163923196775 1.090056049017345 0.8462001326256431 0.9208918672044814 0.8768719435657124 1.0 23.082647772236978 AIT(ph)PPLPESTVPFSNGVLK ddPTM_KYSE-520_SHP099_60min_R1 2 AITPPLPESTVPFSNGVLK 19 0 Q92667-2;Q92667;I3NI36 Q92667-2 AKAP1 A-kinase anchor protein 1, mitochondrial 1 AIT(1)PPLPESTVPFSNGVLK;AIT(0.994)PPLPES(0.005)T(0.001)VPFSNGVLK 164.01 5.3507e-08 314850000.0 354630.0 579830.0 393080.0 434660.0 433420.0 614650.0 443450.0 570550.0 690480.0 493770.0 True False 334957.9669626217 551974.0964574264 418418.56575023755 475969.95571470633 467527.6881775365 610813.7413571593 488278.2536549358 568570.895217371 565106.2375843278 489395.58194724744 0.6844319387393392 1.1278689812874616 0.8549700511913069 0.9725669239204774 0.9553165280268752 1.2480981927274524 0.9977169219880042 1.161781830876148 1.154702368451788 1.0 18.90064155188279 -6.099982872957461 7.2913518039117955 1.115198034652227 0.9266854799911567 0.3775988684426259 0.12446548511659972 0.292092609524303 18.671437373127766 0.0384158681920996 0.038502939497981524 7.943595608458264e-07 6.099982872957461 -0.1885125546610703 AIT(ph)PPQQPYK ddPTM_KYSE-520_SHP099_60min_R1 6 AITPPQQPYK 10 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 AIT(1)PPQQPYK;AIT(1)PPQQPYK;AIT(1)PPQQPYK;AIT(1)PPQQPYK;AIT(1)PPQQPYK;AIT(1)PPQQPYK 174.24 0.00015504 9492760000.0 8469200.0 10335700.0 7855000.0 6435700.0 6768040.0 9566400.0 7144400.0 9576300.0 10719000.0 10160900.0 True False 7999396.593068365 9839157.45779802 8361345.868444363 7047346.993036236 7300646.243120066 9506692.549124109 7866625.674624693 9543082.050425215 8772699.80400071 10070882.331060588 0.7943094090571039 0.9769906086035895 0.8302495842550282 0.6997745342829423 0.7249261785735925 0.9439781179652544 0.7811257659482791 0.9475914559136955 0.8710954527731867 1.0 23.263686750622934 -7.270596558892414 24.768186042795374 0.9320076013153681 0.824230061966222 0.2804316671746714 0.08625044810864282 930.7956597285569 2517582.8669011504 0.04856779872011366 0.02387535303964586 5.362946210839011e-08 7.270596558892414 -0.10777753934914613 AIT(ph)PPQQPYKK ddPTM_KYSE-520_SHP099_60min_R1 1 AITPPQQPYKK 11 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 AIT(1)PPQQPYKK 107.37 0.00044302 0.0 753290.0 742950.0 751690.0 538830.0 574120.0 674240.0 587190.0 716840.0 896090.0 735360.0 True False 711503.5020536148 707257.566809314 800145.1401465237 590040.2411948534 619299.9777040457 670031.8180633711 646548.8956221481 714353.4493517133 733382.6445906336 728845.2825014234 0.9762064997000585 0.9703809351443977 1.0978257791563069 0.809554860765256 0.8497001936797695 0.9193059681525243 0.8870866165219164 0.9801167223035682 1.006225411892134 1.0 19.47525306970574 -10.196981385857656 13.688657788044019 0.9999974718822793 0.9412700011079863 0.04280848884911059 0.07839525236623301 0.0 0.0 0.08068661914269282 0.019569379605841555 6.353581631299095e-11 10.196981385857656 -0.05872747077429297 AITSLLGGGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 AITSLLGGGSPK 12 0 A0A590UJS4;Q6KC79-2;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 AITSLLGGGS(1)PK;AIT(0.001)S(0.003)LLGGGS(0.996)PK;AITSLLGGGS(1)PK;AITSLLGGGS(1)PK;AITSLLGGGS(1)PK;AITSLLGGGS(1)PK;AITSLLGGGS(1)PK 247.11 1.4983e-15 67278803000.0 26751760.0 27463390.0 22139650.0 18955040.0 21550340.0 24277280.0 22396750.0 23895810.0 27826360.0 23424940.0 True False 25267786.54448856 26144007.521011204 23566807.263692494 20756521.302559398 23246229.153338324 24125756.490320224 24660832.061215863 23812921.01243396 22773794.469451755 23217413.255927563 1.0883118746244276 1.1260516937362288 1.0150487913495587 0.894006626567674 1.0012411329846749 1.0391233607456574 1.0621696650431023 1.0256491862354373 0.9808928418689128 1.0 24.468703908993415 -4.809754463436486 6.60716818354584 1.0022700739658348 1.107077412978812 0.48859993109215716 0.04300489986091499 0.16161089703976625 16.320636227057275 0.012466711528531777 0.026896153374322874 1.549692519133654e-05 4.809754463436486 0.10480733901297712 AITVFS(ph)PDGHLFQVEYAQEAVK ddPTM_KYSE-520_SHP099_60min_R1 3 AITVFSPDGHLFQVEYAQEAVK 22 0 O14818;O14818-4;Q8TAA3-2;Q8TAA3-5;Q8TAA3;F5GY34 O14818 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like 1 AIT(0.068)VFS(0.932)PDGHLFQVEYAQEAVK;AITVFS(1)PDGHLFQVEYAQEAVK;AIT(0.013)VFS(0.987)PDGHLFQVEYAQEAVK 296.73 5.722699999999999e-45 383600000.0 369088.0 417384.0 321099.0 279444.0 314210.0 406468.0 286052.0 367445.0 455389.0 390246.0 True False 348613.95288131305 397332.24613384344 341797.55531656527 306002.27374209784 338936.53938965424 403931.08244035067 314968.92775848834 366170.41905730765 372701.83702249103 386788.72404679365 0.9013032986947618 1.0272591247664558 0.8836802472949409 0.7911354564335172 0.8762834031031622 1.0443196952956755 0.8143177610327219 0.9466936244320514 0.9635798922033767 1.0 18.561186211343358 AITVFS(ph)PDGHLFQVEYAQEAVKK ddPTM_KYSE-520_SHP099_60min_R1 1 AITVFSPDGHLFQVEYAQEAVKK 23 1 O14818;O14818-4;Q8TAA3-2;Q8TAA3-5;Q8TAA3;F5GY34 O14818 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like 1 AITVFS(1)PDGHLFQVEYAQEAVKK 273.38 6.1991e-38 289680000.0 114270.0 157110.0 133470.0 114360.0 131090.0 124000.0 98455.0 121520.0 174000.0 105410.0 True False 107931.21530840249 149562.1997730823 142073.68975955073 125228.74001641228 141406.03719992907 123226.07000453543 108407.79222820324 121098.47548298123 142405.9861830511 104476.14940773902 1.0330703794143425 1.4315439516189095 1.3598672095492321 1.1986347192762832 1.3534767313070066 1.1794660379721797 1.037631965216484 1.1591016339085227 1.3630478055549629 1.0 16.672814105178716 -6.432900113529298 6.5318149493562725 1.1471486370015471 1.2837232146062045 0.1839434237122708 0.1352907098392345 0.4232570800604965 25.74200493752681 0.04737614751776556 0.04152207478809823 3.690624721071667e-07 6.432900113529298 0.1365745776046574 AIVHDNKDGTYAVTYIPDK ddPTM_KYSE-520_SHP099_60min_R1 1 AIVHDNKDGTYAVTYIPDK 19 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 89.26100000000001 0.0011137 410740000.0 374600.0 329790.0 202810.0 241900.0 332830.0 291640.0 221770.0 352950.0 325400.0 275350.0 False True 353820.1912534139 313946.39337511774 215883.45710747337 264890.1032701127 359021.8274563461 289819.76658163464 244188.67586662568 351725.6988291496 266315.56266646413 272910.6132190586 1.296469151858932 1.1503634456426242 0.7910409000260794 0.9706112200828627 1.3155290049792534 1.061958577437234 0.8947569791674663 1.288794505572519 0.975834393265971 1.0 18.058068975097868 -8.418905608538322 0.009780411338325277 6.609591572106978e-07 2.100136503260399 0.03412313787285648 0.16963730116755543 14551.53780869468 64.4032142865156 7065.141826884403 6756.898443936372 3.811486549072199e-09 8.418905608538322 2.100135842301242 AIWSQPELAYEEHHAHR ddPTM_KYSE-520_SHP099_60min_R1 1 AIWSQPELAYEEHHAHR 17 0 Q8IYS1 Q8IYS1 PM20D2 Peptidase M20 domain-containing protein 2 0 132.59 1.4082e-05 300790000.0 201700.0 144580.0 130020.0 136760.0 192280.0 169300.0 141430.0 137110.0 130140.0 117910.0 False True 190511.2989210184 137634.15978099575 138401.29723935557 149757.62928160682 207411.34207645437 168243.33590135374 155727.12462378517 136634.3974117147 106509.85656242669 116865.40913259174 1.6301769731098994 1.1777151237697756 1.1842794053998467 1.2814538569894247 1.7747881397576943 1.439633311089257 1.3325339446431252 1.169160305225079 0.9113890701532052 1.0 16.83448844572924 -7.443779640257823 2.239941866122267 0.9565641399547656 1.4010850866064202 0.5100573735336094 0.1771940816000917 0.2940125890524191 2.726673869566035 0.15108725602221468 0.053410820030230344 3.599319172266994e-08 7.443779640257823 0.44452094665165454 AKADS(ph)PVNGLPK ddPTM_KYSE-520_SHP099_60min_R1 4 AKADSPVNGLPK 12 1 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 AKADS(1)PVNGLPK;AKADS(1)PVNGLPK;AKADS(1)PVNGLPK;AKADS(1)PVNGLPK 143.67 1.9559e-05 5238660000.0 10491050.0 9651660.0 8870250.0 7238510.0 8241420.0 9369110.0 7749100.0 8660250.0 11175620.0 9210850.0 True False 9909090.543110305 9187979.766162986 9442040.507901806 7926455.814062611 8889972.866734622 9310633.909195108 8532454.651927983 8630209.614067549 9146409.122454198 9129249.034932861 1.0854223063905255 1.0064332488910526 1.0342625633030773 0.8682483941156837 0.9737901587214179 1.0198685426992058 0.9346283160070168 0.9453362024679413 1.0018796822669285 1.0 23.122064759420045 -4.504811952647436 1.54415512805855 0.9644895157769222 1.094061198331284 0.3826542145938744 0.04480924099055435 0.7130807436818906 2.2796372715427733 0.012927412323208211 0.12258866641783889 3.127433237044101e-05 4.504811952647436 0.1295716825543618 AKAEKPPLSAS(ph)SPQQRPPEPETGESAGTSR ddPTM_KYSE-520_SHP099_60min_R1 2 AKAEKPPLSASSPQQRPPEPETGESAGTSR 30 3 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 AKAEKPPLS(0.05)AS(0.53)S(0.421)PQQRPPEPETGESAGTSR;AKAEKPPLS(0.001)AS(0.499)S(0.499)PQQRPPEPETGESAGTSR 226.07 1.1939e-22 1724280000.0 562350.0 430372.0 443080.0 406428.0 416230.0 483656.0 447601.0 416019.0 466938.0 389674.0 True False 531155.324483068 409696.28311845835 471641.64575306565 445054.7949229664 448984.9329752575 480637.32350091625 492848.87724479137 414575.92718856403 382153.8297490887 386221.7915217843 1.3752598536458005 1.0607798216257562 1.2211678784221665 1.1523295802895257 1.162505438147793 1.2444593600146627 1.2760773422516551 1.0734141270358133 0.9894672909141995 1.0 18.559070041194246 -7.470123160675095 4.363574848515894 1.002137538651338 1.2041411428100703 0.566502065715374 0.07861692235663445 0.15646437959917733 6.219107471633144 0.047561772574114175 0.02011366925261023 3.387480776488344e-08 7.470123160675095 0.2020036041587323 AKDPFAHLPK ddPTM_KYSE-520_SHP099_60min_R1 3 AKDPFAHLPK 10 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ;; 91.93700000000001 0.0033450000000000003 18248830000.0 58534100.0 47052900.0 37241600.0 33155200.0 54228800.0 45648200.0 37435400.0 41906300.0 40206700.0 36028800.0 False True 55287096.78816454 44792408.05615717 39642253.124666825 36306260.23952562 58496298.04033501 45363292.65145993 41219735.56629607 41760936.82630394 32906176.808425747 35709612.861982234 1.5482412817481204 1.2543515447585492 1.1101283365317978 1.0167083126845826 1.6381106753081693 1.2703384051456732 1.154303624786146 1.169459243025403 0.921493518723046 1.0 25.08980915755512 -7.396364666967618 1.535628004393996 0.9664793024113191 1.2912860739773953 0.34568294028253543 0.17771540783791057 0.5241257012891825 2.180879067582456 0.15882095942715443 0.055882713785790454 4.014535780604113e-08 7.396364666967618 0.3248067715660762 AKDQNES(ph)LDEEMFYK ddPTM_KYSE-520_SHP099_60min_R1 7 AKDQNESLDEEMFYK 15 1 A0A0U1RRM8;H0YJ34;Q96AC1;Q96AC1-3 A0A0U1RRM8 FERMT2 Fermitin family homolog 2 1 AKDQNES(1)LDEEMFYK;AKDQNES(1)LDEEMFYK;AKDQNES(1)LDEEMFYK;AKDQNES(1)LDEEMFYK;AKDQNES(1)LDEEMFYK;AKDQNES(1)LDEEMFYK;AKDQNES(1)LDEEMFYK 240.44 6.1505000000000005e-19 6126050000.0 4813640.0 4514030.0 4227090.0 3867450.0 4142320.0 4131660.0 3965930.0 3961820.0 4703820.0 4167960.0 True False 4546617.793446557 4297169.223102832 4499574.984983139 4235011.28520876 4468297.017423223 4105872.777378536 4366844.90814685 3948077.371115738 3849724.8616526397 4131035.1170238154 1.100600131601434 1.0402160962985731 1.0892124752076269 1.02516951931889 1.0816410151077065 0.9939089504367594 1.0570824949299686 0.9557114038672495 0.931903204063333 1.0 21.97807189360457 -6.960884978751616 1.1473479662495802 0.9570828587616299 1.063930401722855 0.5819876416294383 0.03499829656249216 0.33943112465012654 0.8471063917967461 0.025334157158391244 0.012123525491919633 1.0942461348420527e-07 6.960884978751616 0.10684754296122512 AKEEEAPLLFFVAGEDDMTDSLR ddPTM_KYSE-520_SHP099_60min_R1 4 AKEEEAPLLFFVAGEDDMTDSLR 23 1 A0A0C4DGI2;I3L4V6;Q6DKJ4-3;Q6DKJ4 A0A0C4DGI2 NXN Nucleoredoxin 0 ;;; 137.89 1.2020999999999999e-06 108118000.0 727680.0 348405.0 304207.0 430157.0 562660.0 390218.0 315502.0 387914.0 391024.0 281190.0 False True 687314.1398058843 331667.1008334334 323816.6699684094 471038.9919485816 606938.1409025257 387782.5047179821 347396.0211627908 386568.41687380814 320023.8985128814 278698.87536250957 2.4661532591829807 1.1900553972527765 1.1618872503421989 1.690135962464474 2.177755974483458 1.3914031917552057 1.2464923681910285 1.3870469206988738 1.148278399389375 1.0 18.088347655162696 -6.510482289093005 23.18213424090533 1.2407423024324018 1.6834600755201585 0.3045278669493148 0.38215344379061866 359.2077670377265 671745.7690807644 0.14337418739376168 0.12006935069156503 3.086865528180182e-07 6.510482289093005 0.4427177730877567 AKEEELR ddPTM_KYSE-520_SHP099_60min_R1 1 AKEEELR 7 1 E5RG12;H0YAQ1;H0YAQ3;E5RJZ9;O75525-2;O75525;Q5VWX1;Q9H6N6;Q07666;Q07666-2;Q5STV6;A0A0A0MRT5;Q9UBC1-2;Q9UBC1-3;Q9UBC1 E5RG12;Q07666;Q5STV6 KHDRBS3;KHDRBS2;MYH16;KHDRBS1;NFKBIL1 KH domain-containing, RNA-binding, signal transduction-associated protein 3;KH domain-containing, RNA-binding, signal transduction-associated protein 2;Putative uncharacterized protein MYH16;KH domain-containing, RNA-binding, signal transduction-associated protein 1;NF-kappa-B inhibitor-like protein 1 0 123.92 0.011614 0.0 789150.0 798110.0 513180.0 458870.0 776600.0 807810.0 555330.0 677750.0 719210.0 701170.0 False True 745374.276368477 759767.5976124669 546260.4039170316 502480.86683570367 837714.0017504377 802768.158148095 611468.1758985134 675399.0434380393 588619.593808691 694958.179302005 1.0725455121876664 1.093256573187691 0.7860334912032823 0.7230375608218329 1.205416421736071 1.1551316065584998 0.879863269632503 0.9718556649212902 0.8469856335814089 1.0 19.406566637411157 AKEELER ddPTM_KYSE-520_SHP099_60min_R1 2 AKEELER 7 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 111.82 0.0032064999999999997 2721800000.0 4490700.0 4219100.0 3030300.0 2721200.0 4292500.0 4185100.0 3095100.0 3726400.0 4027300.0 3686600.0 False True 4241591.919011492 4016408.103001788 3225637.986651433 2979822.029841387 4630295.329015918 4158979.238515977 3407982.913265063 3713473.9881483004 3296043.8399712723 3653939.592131396 1.160827050382984 1.0991993714540198 0.8827836107629442 0.8155093850643584 1.2672063158863007 1.1382178423179634 0.9326872618813978 1.0162932075136408 0.9020520884004659 1.0 21.80102135248146 -4.536536976628239 24.106904421117303 1.0005381753962617 1.1454202012944719 0.1676320408496561 0.12367639874235677 244.75454036001844 431994.15127021895 0.03367906607421566 0.08922457774375682 2.9071204313446868e-05 4.536536976628239 0.1448820258982102 AKEES(ph)PSKAGMNK ddPTM_KYSE-520_SHP099_60min_R1 1 AKEESPSKAGMNK 13 2 Q6ZN18-2;Q6ZN18;A0A669KBC9;A0A669KBL4;G5EA50;Q6ZN18-3 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 AKEES(0.987)PS(0.013)KAGMNK 57.196999999999996 0.05126 0.0 394390.0 425770.0 375090.0 296120.0 355060.0 346960.0 283090.0 257170.0 501300.0 305180.0 True False 372512.4005030264 405315.37010620104 399268.9015652192 324263.15576827555 383001.2019849479 344794.493941723 311707.49989215424 256277.93729392946 410276.5567446178 302476.3426264469 1.2315422663089814 1.339990316554305 1.3200004274658579 1.0720281558308016 1.2662187021282116 1.139905656580681 1.030518609110226 0.8472660541602366 1.356392216270951 1.0 18.20646278472428 -5.90896896263977 0.8626726433932245 1.0505143880307921 1.2979149598340105 0.29258488815648165 0.13595255774351886 0.7436984696905755 1.2161472815081469 0.0736745194290577 0.10165511504935502 1.2331929616489677e-06 5.90896896263977 0.2474005718032184 AKEFTNVYIK ddPTM_KYSE-520_SHP099_60min_R1 2 AKEFTNVYIK 10 1 P11940;P11940-2;E7ERJ7;E7EQV3;A0A087WTT1;H0YAR2;H0YBN4;H0YCC8;H0Y5F5;B1ANR0;Q13310-2;Q13310;Q13310-3 P11940;H0Y5F5 PABPC1;PABPC4 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 4 0 ; 138.63 0.00028241 931710000.0 2110600.0 2044400.0 1571810.0 1318820.0 2199200.0 1811460.0 1334260.0 1461430.0 1662670.0 1454770.0 False True 1993520.810623208 1946183.9552930398 1673131.3875849196 1444160.256282308 2372264.5282636704 1800154.0062130324 1469140.0219227287 1456360.6404303273 1360771.040499848 1441881.8695939344 1.3825826183559873 1.3497527060529084 1.1603803493666995 1.001580147955543 1.6452558134542272 1.2484753738667893 1.018904566943803 1.0100415790930712 0.9437465503904776 1.0 20.459521541716953 -6.747110690723517 4.45972304160667 0.9899355986344679 1.2993303633959417 0.48424381486764856 0.15505060957788597 0.18946664662131704 8.998146244161262 0.06679199867790445 0.047925571642220235 1.7901495318636205e-07 6.747110690723517 0.30939476476147376 AKEVELVS(ph)E ddPTM_KYSE-520_SHP099_60min_R1 10 AKEVELVSE 9 1 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 AKEVELVS(1)E;AKEVELVS(1)E;AKEVELVS(1)E;AKEVELVS(1)E;AKEVELVS(1)E;AKEVELVS(1)E;AKEVELVS(1)E;AKEVELVS(1)E;AKEVELVS(1)E;AKEVELVS(1)E 96.756 0.0047637 22660480000.0 41519010.0 38072590.0 36136450.0 31064060.0 32071710.0 33422200.0 27342080.0 31500250.0 41831500.0 33179590.0 True False 39215867.74920548 36243525.62827737 38465863.38736427 34016378.92264981 34595571.11393196 33213599.6524644 30106084.27938562 31390982.98496365 34235954.08630055 32885644.645930436 1.1924919876569426 1.1021078047427746 1.169685551294929 1.0343838257967461 1.0519961365030783 1.0099725886496966 0.9154780027434012 0.9545497229244145 1.0410607562937713 1.0 24.970954615413522 -5.549207787235209 1.034025848560441 0.9759383064355305 1.1645605975688231 0.7444491308404568 0.04196146853700112 0.2768059198218427 0.6087436687286678 0.017719726301081283 0.03524389794816529 2.8235287406071407e-06 5.549207787235209 0.18862229113329265 AKFEELNMDLFR ddPTM_KYSE-520_SHP099_60min_R1 4 AKFEELNMDLFR 12 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ;;; 164.81 3.3646e-06 6613350000.0 2811540.0 2452360.0 1594920.0 1655450.0 2734170.0 2509290.0 1966450.0 1958320.0 1915550.0 1808830.0 False True 2655578.2715339647 2334544.944532595 1697731.0951622261 1812783.4702708079 2949333.623700744 2493628.5903361384 2165237.9567025537 1951527.0449953221 1567734.4070858816 1792805.1734484455 1.4812419725596744 1.3021743684742486 0.9469690964225939 1.011143596146554 1.6450943289212658 1.3909088546078128 1.2077374545599602 1.0885326938462456 0.8744588817034468 1.0 20.773787286436416 -7.384589578291156 2.4562877131624345 0.9431834327201419 1.2824164817513075 0.3426489900328602 0.19559227783764022 0.4001468006813693 4.534721432196402 0.15681921419661965 0.06000796608260356 4.1248714806695666e-08 7.384589578291156 0.3392330490311656 AKFENLCK ddPTM_KYSE-520_SHP099_60min_R1 4 AKFENLCK 8 1 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ;;; 123.35 0.00099093 10408610000.0 14443410.0 13216980.0 8854650.0 8310360.0 12778610.0 12618080.0 9637370.0 11123150.0 10736500.0 10569730.0 False True 13642205.255075991 12582016.441708557 9425434.90694092 9100174.115799168 13784213.906654878 12539325.882280871 10611609.411267256 11084566.388812717 8787022.245139822 10476090.41532551 1.302222939496471 1.2010221316248169 0.8997091981138706 0.8686612805943801 1.3157784402557182 1.196947084757597 1.0129360277134967 1.0580823522291356 0.8387692256154315 1.0 23.320597080442507 -4.569318878902738 6.868388341492853 1.0367846663785552 1.2782826866201469 0.3088276067969944 0.138844813133721 0.22712391847941632 25.666784416734842 0.03793847906184792 0.10365679614928208 2.6957593555963206e-05 4.569318878902738 0.24149802024159173 AKGKS(ph)DSEDGEKENEK ddPTM_KYSE-520_SHP099_60min_R1 1 AKGKSDSEDGEKENEK 16 3 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 AKGKS(0.953)DS(0.047)EDGEKENEK 98.26899999999999 0.0016754 434210000.0 459610.0 517700.0 441100.0 302640.0 410500.0 513790.0 332480.0 289260.0 730580.0 379840.0 True False 434114.5170901795 492828.9149164582 469534.0117849535 331402.8146079659 442804.0145744974 510583.2460292762 366090.32309210283 288256.62457379146 597925.0884230657 376474.91311104794 1.1531034392247266 1.3090617668091196 1.2471853911988449 0.8802786137046341 1.1761846517616024 1.3562211670626527 0.9724162496429557 0.765672863011632 1.5882202707267699 1.0 18.52219420670153 AKGPS(ph)ES(ph)SKER ddPTM_KYSE-520_SHP099_60min_R1 1 AKGPSESSKER 11 2 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 2 AKGPS(0.997)ES(0.755)S(0.249)KER 49.595 0.06475 2029100000.0 4224500.0 4152600.0 4042000.0 4465100.0 4324200.0 4317200.0 4089200.0 4289500.0 5122000.0 4402600.0 True False 3990158.56366803 3953102.8628203203 4302553.787428658 4889461.761518731 4664489.938667588 4290254.753415968 4502576.242746112 4274620.725676827 4191973.915112576 4363596.389170965 0.9144197143370805 0.9059277050990883 0.9860109422828851 1.120511918483752 1.068955403447336 0.9831923878347211 1.0318498415481436 0.9796095569895175 0.9606694893954215 1.0 22.057086235085144 -4.874112652863931 4.361483151566835 1.0227862155669734 0.9105152867766421 0.4872463271366636 0.044527785243405935 0.1823917036983737 5.999550254570339 0.012931009481649424 0.02912210556976142 1.3362488582483043e-05 4.874112652863931 -0.11227092879033129 AKGPS(ph)ESS(ph)KER ddPTM_KYSE-520_SHP099_60min_R1 1 AKGPSESSKER 11 2 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 2 AKGPS(0.959)ES(0.096)S(0.945)KER 98.654 0.0092859 493210000.0 1296700.0 1254400.0 1275200.0 1305500.0 1348700.0 1285100.0 1330400.0 1364800.0 1624400.0 1268600.0 True False 1224769.466092636 1194136.7411072147 1357401.432392141 1429574.3274871116 1454835.016946712 1277079.2142163592 1464889.8154527608 1360065.827346714 1329449.907791656 1257361.1909558668 0.974079266087055 0.9497165569420924 1.0795636465924496 1.1369639350808383 1.1570541761677267 1.0156820676527343 1.1650509225110783 1.0816826836469873 1.057333340136724 1.0 20.26196770877986 -4.799147147500402 5.844885904215086 1.0948620695026328 0.9614314192510007 0.46773613973790384 0.05277033939245706 0.1276055992100312 11.26347398687567 0.01335701640883857 0.02973036575497082 1.5880086089301646e-05 4.799147147500402 -0.13343065025163203 AKGPS(ph)ESSKER ddPTM_KYSE-520_SHP099_60min_R1 2 AKGPSESSKER 11 2 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 AKGPS(0.97)ES(0.029)S(0.001)KER;AKGPS(0.792)ES(0.048)S(0.16)KER 105.14 0.0006908999999999999 4167920000.0 4014560.0 4343980.0 4828810.0 3186070.0 3810480.0 4198550.0 3054410.0 3259580.0 6483380.0 3736420.0 True False 3791864.353973051 4135288.680353092 5140082.818969178 3488873.134873122 4110343.0973345456 4172345.2920769523 3363179.5709689343 3248273.277771689 5306161.624709593 3703318.2256907695 1.0239099431607084 1.1166441629740713 1.3879668194084003 0.9420937986560289 1.109908154481608 1.1266504895886165 0.9081530038757634 0.8771250753547645 1.4328127644822772 1.0 21.820387094772165 -5.315119899805741 24.999399103839977 1.0505028305005673 1.1702237751162816 0.09213299490064375 0.17082313359795828 769.4781416564922 358349.7609779178 0.04771777702317257 0.07077695819073275 4.840387159664365e-06 5.315119899805741 0.11972094461571436 AKGPS(ph)PPGAK ddPTM_KYSE-520_SHP099_60min_R1 5 AKGPSPPGAK 10 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 AKGPS(1)PPGAK;AKGPS(1)PPGAK;AKGPS(1)PPGAK;AKGPS(1)PPGAK;AKGPS(1)PPGAK 77.597 0.0219 9166700000.0 12466100.0 11907200.0 9693500.0 8320900.0 9213500.0 11046000.0 8905200.0 10699200.0 13324300.0 10735300.0 True False 11774580.582445754 11335160.238928419 10318358.520148378 9111715.834230198 9938550.032355985 10977057.816694353 9805424.522376675 10662086.972412063 10904942.998269117 10640193.59393703 1.1066133786470875 1.0653152255977179 0.9697528930326945 0.856348688939477 0.9340572560652605 1.0316595952680103 0.9215456876615459 1.002057610914853 1.0248820100870106 1.0 23.343021064531094 -4.692087548562704 3.726500983193696 0.9626573635887702 1.096730882754104 0.4735170802496429 0.05055345206583849 0.19282635460526307 5.1874037311429095 0.014035368640256445 0.04142547221621355 2.0319473534122253e-05 4.692087548562704 0.13407351916533383 AKGPSES(ph)SKER ddPTM_KYSE-520_SHP099_60min_R1 2 AKGPSESSKER 11 2 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 AKGPS(0.018)ES(0.491)S(0.491)KER;AKGPS(0.006)ES(0.497)S(0.497)KER 109.48 0.00023930000000000002 10182800000.0 2089500.0 2007810.0 1775280.0 1648680.0 1880150.0 1641120.0 1636050.0 1604580.0 2172700.0 1581610.0 True False 1973591.2696850155 1911351.793815746 1889717.38934843 1805370.0515062814 2028107.1084098462 1630877.161337445 1801437.9003092966 1599014.0864917866 1778192.4493098557 1567598.1658739618 1.2589905453128072 1.219286827086925 1.2054858384545772 1.1516791042554952 1.2937672118792913 1.0403668470919678 1.1491707119374979 1.0200407995503809 1.1343420067849366 1.0 20.580124359391423 -6.270968855160729 24.999767291595575 1.0750607836612942 1.2202266871460683 0.6663572472080135 0.05540698082022219 429.99082631645103 1128041.0204529185 0.018332106887413366 0.016366708826058247 5.358350828211536e-07 6.270968855160729 0.1451659034847741 AKGPSESS(ph)KER ddPTM_KYSE-520_SHP099_60min_R1 2 AKGPSESSKER 11 2 Q8TEA8;A0A087WZV9 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1;D-tyrosyl-tRNA(Tyr) deacylase 1 AKGPS(0.001)ES(0.11)S(0.889)KER;AKGPSES(0.004)S(0.996)KER 127.18 0.00013134 4015400000.0 4581800.0 3976400.0 3546800.0 3327600.0 3771500.0 3481900.0 3324900.0 3542900.0 4540800.0 3429300.0 True False 4327638.420408138 3785367.775301914 3775432.403080653 3643854.103520579 4068295.5931004137 3460168.1705547767 3661013.339896938 3530610.506819079 3716305.1842528665 3398919.069955029 1.2732396186371677 1.1136975307129033 1.1107744330995812 1.072062625947958 1.1969380586499934 1.0180201703362588 1.0771110651791356 1.038745093411651 1.0933785441093298 1.0 21.696644580287444 -1.0000000000000002 0.620999638503556 1.0658609392360394 14.959101578525807 0.5847255393712559 0.05054887627737708 140.30217080075005 1.0093490859955243 0.021643772261197756 2660.3431026134144 0.09999999999999995 1.0000000000000002 13.893240639289768 AKGS(ph)ETPGATPGSK ddPTM_KYSE-520_SHP099_60min_R1 1 AKGSETPGATPGSK 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 AKGS(0.847)ET(0.153)PGATPGSK 140.02 3.9368e-06 846460000.0 887330.0 1073900.0 906860.0 601560.0 656560.0 878700.0 633010.0 783750.0 1098200.0 808890.0 True False 838108.0360514988 1022308.2320432373 965317.6466273025 658732.0815343906 708227.5366846106 873215.7073627838 697000.8283822557 781031.3541786261 898794.5633691197 801723.8639068968 1.045382423777805 1.2751375854791278 1.204052529911226 0.8216445975853954 0.8833808853254445 1.0891726524236147 0.8693776744846872 0.9741899790441143 1.1210774729707877 1.0 19.612745892200692 -5.24009882785286 24.88213572431608 0.9621937890586046 1.1848855586623928 0.4648059117058264 0.10271085417400695 649.559836794816 757356.7984263749 0.027927252582357974 0.048312859881650475 5.753090053872494e-06 5.24009882785286 0.22269176960378811 AKGSET(ph)PGATPGSK ddPTM_KYSE-520_SHP099_60min_R1 6 AKGSETPGATPGSK 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 AKGSET(1)PGATPGSK;AKGS(0.003)ET(0.997)PGATPGSK;AKGS(0.001)ET(0.998)PGATPGSK;AKGSET(1)PGATPGSK;AKGSET(1)PGATPGSK;AKGS(0.15)ET(0.85)PGATPGSK 248.75 3.1501000000000003e-18 3021510000.0 3534950.0 4398220.0 3211280.0 2315730.0 2638640.0 3661180.0 2497590.0 2730610.0 4376830.0 3381960.0 True False 3338859.276751878 4186922.9093371886 3418284.2470296645 2535816.282950388 2846285.956192087 3638329.217574231 2750070.7713294197 2721138.1512391656 3582108.002905539 3351998.4655250614 0.9960801924856714 1.2490825853290908 1.0197750035348598 0.7565087839481377 0.849131043902862 1.0854209078536432 0.8204272166630139 0.8117957628041226 1.0686484614319276 1.0 21.67659005792591 -5.001485107262205 24.98859994853373 0.9045713508592533 1.1255432900605145 0.3340849036712167 0.11892890106248598 57.341296507290615 964905.358782786 0.03050272151363371 0.0621182203080223 9.965862542813871e-06 5.001485107262205 0.22097193920126112 AKHDELTYF ddPTM_KYSE-520_SHP099_60min_R1 4 AKHDELTYF 9 1 P04080;A0A1W2PQG6 P04080 CSTB Cystatin-B 0 ;;; 114.84 0.00094314 4096970000.0 14714500.0 11546400.0 8051400.0 9199300.0 13862600.0 11563300.0 9401000.0 9429000.0 9626900.0 9445300.0 False True 13898257.35237146 10991693.61250025 8570406.126695476 10073598.706129607 14953507.752595438 11491129.15551166 10351344.824918373 9396292.999745136 7878897.634400081 9361621.990332207 1.4845992891749165 1.174122777425902 0.9154830365449681 1.0760527092989507 1.597320183194536 1.2274720307419598 1.1057212986818157 1.0037035258899296 0.8416167243813794 1.0 23.158327081470464 -7.14376951598854 2.248659686992077 0.9285006962747104 1.2336402227784922 0.3435567020858177 0.18467135923739905 0.41865175931670334 4.069298579114593 0.12404564882420484 0.05876737909891512 7.181753322990499e-08 7.14376951598854 0.30513952650378173 AKIDDPTDSKPEDWDKPEHIPDPDAK ddPTM_KYSE-520_SHP099_60min_R1 5 AKIDDPTDSKPEDWDKPEHIPDPDAK 26 3 P27797;K7EJB9;K7EL50 P27797 CALR Calreticulin 0 ;;;; 193.08 1.2287e-15 52463400000.0 31577600.0 27954100.0 18963200.0 15857600.0 26053700.0 25752900.0 19051400.0 22419900.0 24180000.0 20453400.0 False True 29825927.579615 26611143.076040436 20185598.21419276 17364701.5362387 28103977.964724988 25592166.598546777 20977301.435746178 22342130.599743973 19789521.5281964 20272198.788504407 1.4712724500574723 1.3126915019761252 0.9957281114290989 0.8565771141749834 1.3863310170706142 1.2624267779506544 1.0347817547863436 1.1021069215448571 0.9761901870959495 1.0 24.272999240891657 -4.573102333493281 4.310082157628215 1.0895510542532394 1.4421307272404027 0.4484966354620139 0.14387041388953595 0.18683868324736724 7.189099551111576 0.039589890770377174 0.12438935187036095 2.6723766381500187e-05 4.573102333493281 0.3525796729871633 AKKDDTDDEIAK ddPTM_KYSE-520_SHP099_60min_R1 1 AKKDDTDDEIAK 12 2 P27824;P27824-2;H0Y9Q7;D6RAU8;D6RB85;D6RDP7;D6RAQ8 P27824 CANX Calnexin 0 117.92 9.2644e-05 1380000000.0 633830.0 765940.0 466870.0 611550.0 794560.0 776750.0 530480.0 811910.0 1043100.0 595640.0 False True 598670.1863912204 729143.0927006205 496965.18721841165 669671.5281307879 857087.3515720165 771902.015129217 584106.095385884 809093.673711218 853699.3344111529 590363.0930009075 1.0140711597469394 1.235075670117305 0.8417958255016591 1.1343384030440373 1.451796973308931 1.3075038468368998 0.9894014417750641 1.3705017866182472 1.4460581031101831 1.0 19.17124300747321 -5.529336042335022 24.881981020866586 1.2704240669686633 1.0403364775990835 0.2607802399362713 0.17471932013318042 206.98248197379323 797562.8388251025 0.051339929925013725 0.06645157680532601 2.9557245421399233e-06 5.529336042335022 -0.23008758936957974 AKLEQLFQDEVAK ddPTM_KYSE-520_SHP099_60min_R1 3 AKLEQLFQDEVAK 13 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;; 148.57 7.8502e-06 1578598000.0 2466351.0 2171384.0 1641190.0 1548961.0 2328755.0 2140038.0 1519184.0 1794317.0 1940652.0 1695128.0 False True 2329537.5934811747 2067067.45332617 1746983.733396846 1696173.7877278943 2512014.7696965556 2126681.2290352117 1672757.9445270477 1788092.9331237348 1588278.5166558074 1680110.4847096275 1.3865383346404074 1.2303163822487664 1.039802887545682 1.0095608611245843 1.4951485587155928 1.2657984390846564 0.9956237757876676 1.0642710401469637 0.9453417088402425 1.0 20.68012467762678 -6.76533663199924 24.995542112903703 1.0066650034552174 1.229832968165826 0.41562260193468004 0.1371565782346962 117.79898650487985 755507.4734076817 0.060392944175791594 0.04244096586209334 1.716577311381415e-07 6.76533663199924 0.22316796471060862 AKLNWLSVDFNNWKDWEDDS(ph)DEDMSNFDR ddPTM_KYSE-520_SHP099_60min_R1 2 AKLNWLSVDFNNWKDWEDDSDEDMSNFDR 29 2 A0A087WYT3;Q15185-4;Q15185;B4DDC6 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 1 AKLNWLSVDFNNWKDWEDDS(1)DEDMSNFDR;AKLNWLSVDFNNWKDWEDDS(1)DEDMSNFDR 392.86 2.2889999999999996e-109 629110000.0 196696.0 359493.0 336162.0 229406.0 231186.0 210446.0 115478.0 152044.0 411170.0 150089.0 True False 185784.88077624494 342222.41667000623 357831.54039821716 251208.67726657097 249379.02293159548 209132.52845301994 127151.64319667293 151516.59485133627 336511.8927522134 148759.328227475 1.2488956691989923 2.3005106351831435 2.4054393405907284 1.6886919311872381 1.676392505283824 1.4058448027758326 0.8547473607990437 1.0185350838613967 2.262122965745294 1.0 17.182620612541843 -5.948925568995127 1.842593626854089 1.2810647264832433 1.9968219602923192 0.27351667028002113 0.4671649273816891 0.43710092906037284 3.020454435198422 0.1751560263845963 0.20017271885442958 1.1247977294705634e-06 5.948925568995127 0.7157572338090759 AKNS(ph)PPQAPSTR ddPTM_KYSE-520_SHP099_60min_R1 4 AKNSPPQAPSTR 12 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 AKNS(0.995)PPQAPS(0.002)T(0.003)R;AKNS(0.997)PPQAPS(0.001)T(0.001)R;AKNS(0.999)PPQAPS(0.001)TR;AKNS(1)PPQAPSTR 97.904 0.0011343 16846190000.0 2343140.0 2208830.0 2266280.0 2007950.0 1916290.0 2089070.0 2041700.0 2238050.0 2772880.0 2240690.0 True False 2213161.353266211 2102714.491278576 2412368.034976207 2198784.96428782 2067091.1208013755 2076031.3392288291 2248094.961071785 2230286.726914799 2269394.890616429 2220839.2298304415 0.9965428039719847 0.9468107655136819 1.0862416345015613 0.9900694002310534 0.9307702660490176 0.9347958696619979 1.0122727169419754 1.0042540211634674 1.0218636541239838 1.0 21.082673526945005 AKNWEDEDFYDS(ph)DDDTFLDR ddPTM_KYSE-520_SHP099_60min_R1 9 AKNWEDEDFYDSDDDTFLDR 20 1 A0A087X0M4;Q9BWU0;A0A087WWF4 A0A087X0M4 SLC4A1AP Kanadaptin 1 AKNWEDEDFY(0.002)DS(0.998)DDDTFLDR;AKNWEDEDFYDS(1)DDDTFLDR;AKNWEDEDFYDS(1)DDDTFLDR;AKNWEDEDFYDS(1)DDDTFLDR;AKNWEDEDFYDS(1)DDDTFLDR;AKNWEDEDFYDS(0.998)DDDT(0.002)FLDR;AKNWEDEDFYDS(0.999)DDDT(0.001)FLDR;AKNWEDEDFYDS(0.998)DDDT(0.002)FLDR;AKNWEDEDFYDS(0.999)DDDT(0.001)FLDR 221.29 3.9569e-19 10588730000.0 7246000.0 7392300.0 7294360.0 5904050.0 6265780.0 6113480.0 5561620.0 5478760.0 8722360.0 6078840.0 True False 6844049.935457107 7037162.81193149 7764566.11698866 6465169.136882637 6758861.238588542 6075323.503639741 6123842.8257805025 5459755.460312191 7138599.296802289 6024986.206865961 1.135944498538064 1.1679965016205467 1.288727617025962 1.0730595747281633 1.121805263369113 1.0083547571804259 1.0164077751417733 0.9061855534358497 1.1848324712623035 1.0 22.522526507876922 -5.814856130280969 1.5727208055853608 1.0180020480690053 1.1893798428477247 0.43391813620348074 0.07960607318727476 0.3386217358377736 1.7381620974735748 0.02889814358415288 0.0374384373542549 1.531594752522658e-06 5.814856130280969 0.1713777947787194 AKPAMPQDSVPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 13 AKPAMPQDSVPSPR 14 1 P53396 P53396 ACLY ATP-citrate synthase 1 AKPAMPQDS(0.001)VPS(0.999)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDS(0.002)VPS(0.998)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDS(0.022)VPS(0.978)PR;AKPAMPQDSVPS(1)PR;AKPAMPQDS(0.001)VPS(0.999)PR;AKPAMPQDS(0.001)VPS(0.999)PR 215.76 1.217e-13 47812330000.0 25944430.0 22943950.0 20613190.0 19381740.0 20741850.0 22605030.0 21251980.0 22101710.0 25788350.0 22005920.0 True False 24505240.748961005 21841688.202428937 21941949.209670138 21223774.74226737 22374115.590017166 22463943.622859873 23400337.53773733 22025044.32658789 21105835.711400494 21810964.66914668 1.123528515161257 1.0014086278964873 1.0060054446243154 0.9730782230045086 1.025819624643522 1.029938105151162 1.0728703609721097 1.0098152310403787 0.9676708954215287 1.0 24.37855024403048 -4.258160688247558 24.688908137354627 1.0117920776417129 1.1235285649701496 0.5929711423203288 0.02826006225956076 203.55528256370127 1532709.791004505 0.007537688041198341 0.05205630571915074 5.518732093164343e-05 4.258160688247558 0.11173648732843677 AKPPADPAAAAS(ph)PCR ddPTM_KYSE-520_SHP099_60min_R1 2 AKPPADPAAAASPCR 15 1 Q9GZT9-2;Q9GZT9 Q9GZT9-2 EGLN1 Egl nine homolog 1 1 AKPPADPAAAAS(1)PCR;AKPPADPAAAAS(1)PCR 108.96 0.00081736 238500000.0 948400.0 912940.0 835890.0 761650.0 720010.0 807150.0 658810.0 729270.0 941510.0 743370.0 True False 895790.3614114717 869080.9920491235 889772.806871288 834036.9870015773 776670.6907034938 802112.2774529096 725408.94416599 726740.332582897 770555.5175356567 736784.3201331091 1.2158108376269954 1.1795595648562571 1.2076435159620926 1.1319961136671561 1.0541357483872331 1.0886663240987515 0.984560778973874 0.9863678049657768 1.0458359339086456 1.0 19.490882833495117 -5.759115440029954 0.9555202018138351 1.005663272904312 1.2128990708587721 0.8924161850233477 0.027956191586674093 0.16986164123121222 0.33336214207547665 0.0133819399651474 0.021257083837675026 1.741343944377862e-06 5.759115440029954 0.20723579795446012 AKPS(ph)PAPPSTTTAPDASGPQK ddPTM_KYSE-520_SHP099_60min_R1 3 AKPSPAPPSTTTAPDASGPQK 21 1 Q5QNY5;P40855;E9PS71;B7Z8B3 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 AKPS(0.997)PAPPS(0.002)T(0.001)TTAPDASGPQK;AKPS(0.951)PAPPS(0.04)T(0.008)TTAPDASGPQK;AKPS(0.997)PAPPS(0.003)TTTAPDASGPQK 133.15 5.3155999999999996e-06 1952140000.0 1154460.0 1211340.0 902930.0 786210.0 908820.0 1485220.0 1112790.0 1514480.0 1643680.0 1677350.0 True False 1090419.802441047 1153145.4081415911 961134.3125390795 860931.1620173439 980338.9635215469 1475950.1910656155 1225281.6729838217 1509226.6223622886 1345229.145800903 1662489.9839585521 0.6558955620560494 0.6936254770063869 0.5781293853274978 0.5178564504595583 0.5896811246869972 0.8877949372971456 0.7370159729120928 0.9078109564117022 0.8091652634187787 1.0 20.66491421812636 -6.258951360465236 24.991615322800424 0.8543867752471429 0.6052875088223403 0.738872640722422 0.0774496232423855 121.87761708775405 1224237.7072192628 0.0264291991114548 0.0252789080927324 5.508693884865213e-07 6.258951360465236 -0.24909926642480262 AKPS(ph)PAPPSTTTAPDASGPQKR ddPTM_KYSE-520_SHP099_60min_R1 2 AKPSPAPPSTTTAPDASGPQKR 22 2 Q5QNY5;P40855;E9PS71;B7Z8B3 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 AKPS(0.995)PAPPS(0.003)T(0.001)TTAPDASGPQKR;AKPS(0.997)PAPPS(0.002)T(0.001)TTAPDASGPQKR 113.5 0.00010865 1860580000.0 871860.0 925730.0 819880.0 569560.0 610180.0 923030.0 644920.0 873700.0 1287510.0 915140.0 True False 823496.1877901788 881256.5412509409 872730.7766543812 623690.8111555423 658197.6945507115 917269.0273894066 710114.8074126538 870669.338623113 1053730.6394858635 907032.5715681456 0.907901450955016 0.9715820234849546 0.9621824000714099 0.6876167744199737 0.7256604836282452 1.0112856540571231 0.7828989053667106 0.9599096723922877 1.1617340683412232 1.0 19.790794833345082 -7.539636775639328 6.127887622319014 1.077425949910851 0.8657361642571999 0.3949706972196301 0.1071690014742306 0.17008253974396906 23.894387001247104 0.07472347092968185 0.02891305589297163 2.886444586245894e-08 7.539636775639328 -0.21168978565365104 AKPS(ph)PHPIK ddPTM_KYSE-520_SHP099_60min_R1 2 AKPSPHPIK 9 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 AKPS(1)PHPIK;AKPS(1)PHPIK 92.19 0.0024874000000000003 2306900000.0 5750200.0 4420200.0 4299700.0 4682600.0 4797700.0 4904500.0 5226300.0 5328500.0 5220200.0 4849200.0 True False 5431224.943260489 4207846.957144533 4576865.541763237 5127632.896124968 5175251.694821119 4873889.196268096 5754625.407772678 5310016.677181244 4272343.270533126 4806239.860620516 1.1300361822889304 0.8754966624993354 0.9522757237447433 1.066869953399071 1.0767776567341276 1.0140753140936343 1.1973238071039007 1.1048172440764716 0.8889159497714996 1.0 22.196477218851605 -5.268188539049618 24.039427287386882 1.0599722455123632 0.974892236908903 0.07629086536166219 0.09520011206608735 611.7989796862122 2179129.536462739 0.026524622017939536 0.040421295344689 5.392764571089193e-06 5.268188539049618 -0.08508000860346021 AKPS(ph)PHPIKDK ddPTM_KYSE-520_SHP099_60min_R1 1 AKPSPHPIKDK 11 2 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 AKPS(1)PHPIKDK 75.574 0.012618 1832000000.0 2149500.0 1865600.0 1858800.0 1735600.0 1850800.0 1752800.0 1681100.0 1598200.0 2103500.0 1683300.0 True False 2030262.9500779812 1775973.775677309 1978621.222185154 1900550.9021728332 1996447.4303885049 1741860.1250318529 1851041.993954929 1592656.217222685 1721557.4249198136 1668387.2715875837 1.2169014860357021 1.0644853301879662 1.1859484041150479 1.1391545203796298 1.19663309855436 1.0440382486102011 1.1094798105199741 0.9546082281646542 1.0318691914267812 1.0 20.670022780138225 -6.783829842455953 1.3228461273901253 0.9966341569225742 1.154156899625589 0.6141011788579386 0.05266140800320794 0.2871841867004754 1.0097167089527512 0.03152576125679045 0.01791050460275516 1.645016117943201e-07 6.783829842455953 0.15752274270301492 AKPVGS(ph)PLFK ddPTM_KYSE-520_SHP099_60min_R1 2 AKPVGSPLFK 10 1 Q92576-2;Q92576;E7EVH3;D6R9X2;E9PE34;A0A1B0GX99 Q92576-2 PHF3 PHD finger protein 3 1 AKPVGS(1)PLFK;AKPVGS(1)PLFK 91.62 0.0053549 3465100000.0 2399000.0 2249410.0 1967510.0 2059800.0 2186150.0 1933470.0 1926100.0 2265320.0 2477100.0 2118240.0 True False 2265922.687712061 2141344.967166754 2094338.8427273035 2255562.7726985505 2358187.5675080107 1921402.4965457206 2120808.9849245045 2257462.1336496626 2027321.0826094004 2099474.04156578 1.0792811165324743 1.0199435309853828 0.9975540546171046 1.0743465877846052 1.123227780301243 0.9151827831663714 1.0101620419859123 1.0752512719643132 0.965632840641093 1.0 21.001596519756767 -6.2519110876355235 24.998028676098887 0.9990062558795586 1.0541612930559552 0.30184111217834075 0.049257255699700395 1106.7820304783618 2903708.334221128 0.017112533756405576 0.016907375455311555 5.598722114404433e-07 6.2519110876355235 0.05515503717639658 AKRPS(ph)SEDFVFL ddPTM_KYSE-520_SHP099_60min_R1 2 AKRPSSEDFVFL 12 2 K7EQ67;K7EN30;Q86TL0-2;Q86TL0 K7EQ67 ATG4D Cysteine protease ATG4D;Cysteine protease ATG4D, mitochondrial 1 AKRPS(0.999)S(0.001)EDFVFL;AKRPS(0.849)S(0.151)EDFVFL 113.72 0.00012402 303760000.0 634330.0 627450.0 588080.0 458060.0 519590.0 516230.0 508700.0 528680.0 706220.0 600430.0 True False 599142.4503944955 597306.3601783497 625988.5777612687 501593.88467923977 560478.7769373044 513008.0170842045 560124.3604335678 526846.13247484 577988.2503574383 595110.6573274719 1.0067748628215292 1.0036895707106612 1.0518860149009324 0.8428581785643059 0.9418059818560591 0.8620380273275988 0.9412104346256864 0.88529103955356 0.9712281963711976 1.0 19.18279842846102 -5.247531279411954 24.978205446648055 0.9151517089660802 1.0190740953181294 0.4849600327138279 0.04704994465639693 608.2963352088562 1092465.9475100413 0.011840336231266863 0.02037691853669789 5.65547022941911e-06 5.247531279411954 0.1039223863520492 AKS(ph)ELTLTPDPAPPMAHS(ph)PLHR ddPTM_KYSE-520_SHP099_60min_R1 1 AKSELTLTPDPAPPMAHSPLHR 22 1 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5;Q9NRA0-3 E9PCV4 SPHK2 Sphingosine kinase 2 2 AKS(0.51)ELT(0.464)LT(0.026)PDPAPPMAHS(1)PLHR 91.115 0.0017214000000000003 501990000.0 199750.0 217100.0 179640.0 215500.0 231760.0 209580.0 204270.0 192380.0 271900.0 223630.0 True False 188669.46930824706 206670.19012625626 191219.88183416237 235981.05520756228 249998.19346598195 208271.9334802461 224919.6050830842 191712.67868182962 222529.8140412158 221648.8121815075 0.851209024994667 0.932421825734914 0.8627155722250072 1.0646619437523452 1.127902247728985 0.9396483176715285 1.0147566452957044 0.8649388949796705 1.0039747646334638 1.0 17.757916105541657 -5.2482863186055075 24.816413419978957 0.9997872738209915 0.8871461016102017 0.3932018133323907 0.06826626732620143 842.4595248142962 1589499.5767683156 0.01980573528486902 0.03402833830018722 5.645646498900832e-06 5.2482863186055075 -0.11264117221078984 AKS(ph)LDRR ddPTM_KYSE-520_SHP099_60min_R1 4 AKSLDRR 7 2 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 AKS(1)LDRR;AKS(1)LDRR;AKS(1)LDRR;AKS(1)LDRR 80.896 0.01057 29007900000.0 14725600.0 14955000.0 9611700.0 9666200.0 15998000.0 20373600.0 11785000.0 10781800.0 15191400.0 36975900.0 True False 13908741.613244165 14236539.352087364 10231285.561263738 10584872.74175101 17256951.58383145 20246440.80519683 12976342.810516218 10744400.45229105 12433024.704029897 36648322.29281486 0.3795191905952831 0.3884636038271943 0.2791747321887542 0.28882284589126317 0.4708797157466275 0.5524520506949994 0.35407740378501074 0.29317577941071427 0.33925222018873896 1.0 25.12724381959008 -10.788641747652271 2.490085194273334 1.1867365332240216 0.372485251133004 0.8436832987491966 0.08112572850727605 11343852.745047016 7609248.830615046 12839180.637507712 0.023451991632545282 1.626890234731527e-11 10.788641747652271 -0.8142512820910176 AKS(ph)LESLIYMSTR ddPTM_KYSE-520_SHP099_60min_R1 3 AKSLESLIYMSTR 13 1 O95171-3;O95171-2;O95171;F2Z2X8 O95171-3 SCEL Sciellin 1 AKS(1)LESLIYMSTR;AKS(0.997)LES(0.003)LIYMSTR;AKS(0.999)LES(0.001)LIYMSTR 115.57 0.00043867 297880000.0 598530.0 519950.0 426160.0 403610.0 444010.0 443720.0 342940.0 414150.0 569560.0 365840.0 True False 565328.3477600253 494970.8215391391 453630.9554801083 441968.97305022815 478951.06092867925 440950.57889042265 377607.72197186557 412713.41031333705 466142.26143918745 362598.9422192136 1.5591009292527092 1.3650641629282483 1.2510542714320998 1.218892063901914 1.3208837786380623 1.2160834672921925 1.041392232588418 1.13820908518764 1.2855588010992474 1.0 18.46801519086659 -1.0000000000000002 0.3415770619276472 1.1186748476807147 5.758027778880892 0.6959580682313002 0.08446126610780436 35.940342329949374 0.5094103618212619 0.075849595027262 106.49648601890917 0.09999999999999995 1.0000000000000002 4.639352931200177 AKS(ph)LSAMDVEK ddPTM_KYSE-520_SHP099_60min_R1 6 AKSLSAMDVEK 11 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 AKS(0.969)LS(0.031)AMDVEK;AKS(0.998)LS(0.002)AMDVEK;AKS(0.986)LS(0.014)AMDVEK;AKS(0.992)LS(0.008)AMDVEK;AKS(0.994)LS(0.006)AMDVEK;AKS(0.999)LS(0.001)AMDVEK 155.98 5.2181999999999996e-05 3724430000.0 4075570.0 4166530.0 4153830.0 3710870.0 4252080.0 3940840.0 3826540.0 4046270.0 5601970.0 4467020.0 True False 3849490.007652627 3966363.6447109715 4421592.528162988 4063549.969086252 4586694.504974256 3916243.755779628 4213364.006631541 4032234.4337765193 4584793.4621716505 4427445.678088976 0.8694606975537613 0.8958582291229777 0.9986779849259462 0.9178091081266992 1.035968555791297 0.8845379572155476 0.9516466859171405 0.9107360602370976 1.0355391789133346 1.0 22.07804317546965 -4.612568604106303 5.8493424192612045 0.9607278384854031 0.8757644750527659 0.31557153247455294 0.04954212162539013 0.2198266362135624 11.13245845377715 0.011969291642178534 0.03290186993326571 2.4402335617255068e-05 4.612568604106303 -0.08496336343263722 AKS(ph)PMFPALGEAS(ph)SDDDLFQSAKPK ddPTM_KYSE-520_SHP099_60min_R1 1 AKSPMFPALGEASSDDDLFQSAKPK 25 2 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 2 AKS(1)PMFPALGEAS(0.539)S(0.46)DDDLFQSAKPK 147.27 5.8252e-07 580130000.0 294850.0 239830.0 187220.0 215180.0 283060.0 230250.0 257430.0 232430.0 329690.0 242250.0 True False 278494.0827310972 228308.20680783095 199288.5007625915 235630.64250377382 305335.2116089096 228812.92434309897 283453.53667468735 231623.7545795699 269826.60680856375 240103.85346764795 1.1598901005086202 0.9508727307393825 0.8300095891190851 0.9813696827465668 1.2716797635655233 0.952974810851712 1.1805455538550131 0.9646815377362502 1.123791238298142 1.0 17.87329903224943 -5.555052517523832 24.999558883461837 1.0832850174609303 0.9653804518877617 0.14640697192784824 0.1187209432165126 324.5692000581271 252193.97281227272 0.03410592217800147 0.044030855922170264 2.785784274323344e-06 5.555052517523832 -0.11790456557316864 AKS(ph)PMFPALGEASSDDDLFQSAKPKPAK ddPTM_KYSE-520_SHP099_60min_R1 2 AKSPMFPALGEASSDDDLFQSAKPKPAK 28 3 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 AKS(1)PMFPALGEASSDDDLFQSAKPKPAK;AKS(1)PMFPALGEASSDDDLFQSAKPKPAK 140.34 1.3228999999999999e-06 704640000.0 282549.0 316900.0 243716.0 241163.0 259784.0 284677.0 236595.0 257783.0 405840.0 265724.0 True False 266875.4437225327 301675.64832340274 259426.32331938756 264083.0590117002 280227.5228312338 282900.22524742835 260512.33154468238 256888.8109400047 332149.6863938473 263369.89209014346 1.013310373500056 1.1454447048949254 0.9850265011711888 1.0027078528828672 1.0640074330718126 1.0741555270509062 0.9891500105696097 0.9753917158157149 1.2611528362557198 1.0 18.006730903497697 -7.727940323284039 24.999992316873975 1.1305778315034765 1.0336024933255246 0.2129862286644616 0.07633385441232152 240.75151030014547 179670.87089381937 0.048864600432502105 0.018466735323888574 1.8709392098008278e-08 7.727940323284039 -0.0969753381779519 AKS(ph)PNGSSSVNWPPEFRPGEPWK ddPTM_KYSE-520_SHP099_60min_R1 1 AKSPNGSSSVNWPPEFRPGEPWK 23 2 H7C269;Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7 H7C269 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 AKS(0.998)PNGS(0.002)SSVNWPPEFRPGEPWK 164.62 1.4121999999999998e-10 573920000.0 226600.0 176490.0 171910.0 259640.0 205500.0 152590.0 194060.0 198590.0 264320.0 167000.0 True False 214030.04628409905 168011.15548310912 182991.5936657254 284316.10753638775 221671.6808649433 151637.62920961328 213677.4786430869 197901.13764125458 216326.15096496558 165520.50992403392 1.2930726614020747 1.0150473531057769 1.105552379881562 1.7177092293086542 1.339239958641259 0.9161259186502493 1.2909426073007797 1.1956290959475768 1.306944686578413 1.0 17.336650469308402 AKS(ph)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK ddPTM_KYSE-520_SHP099_60min_R1 154 AKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 32 1 A0A1W2PPS1;Q00839-2;Q00839;Q5RI18;A0A1W2PP35;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(0.998)PQPPVEEEDEHFDDT(0.002)VVCLDTYNCDLHFK;AKS(0.992)PQPPVEEEDEHFDDT(0.007)VVCLDTYNCDLHFK;AKS(0.986)PQPPVEEEDEHFDDT(0.014)VVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(0.952)PQPPVEEEDEHFDDT(0.048)VVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(0.994)PQPPVEEEDEHFDDT(0.006)VVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(0.998)PQPPVEEEDEHFDDT(0.002)VVCLDTYNCDLHFK;AKS(0.995)PQPPVEEEDEHFDDT(0.005)VVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(0.985)PQPPVEEEDEHFDDT(0.015)VVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(0.998)PQPPVEEEDEHFDDT(0.002)VVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(0.984)PQPPVEEEDEHFDDT(0.012)VVCLDT(0.003)Y(0.001)NCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(0.999)PQPPVEEEDEHFDDT(0.001)VVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;AKS(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK 383.18 3.6042e-114 818333701700.0 25693458.0 25220183.999999996 22798319.299999997 23211557.9 20149207.37 20114367.9 21499887.099999998 21969437.099999998 25607249.700000003 18783173.600000005 True False 24268190.66610131 24008568.504372016 24267935.440678623 25417577.38400663 21734835.356711466 19988826.668890156 23673305.50674546 21893230.25040527 20957618.660713438 18616769.294991948 1.3035661709913136 1.2896205632644597 1.3035524615544805 1.3653054931955435 1.1674869582531864 1.0737000793294087 1.271611907073144 1.175995141987107 1.125738753519989 1.0 24.150099397339588 -6.989105049233353 0.1259248107327145 0.8396790054196769 1.5290032604765789 0.6514499601560072 0.06586083484444157 5.425725322247482 0.5461769142949612 1.178744279300152 1.504511448453308 1.0254038666437736e-07 6.989105049233353 0.689324255056902 AKS(ph)PT(ph)PDGSER ddPTM_KYSE-520_SHP099_60min_R1 3 AKSPTPDGSER 11 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 2 AKS(0.785)PT(0.674)PDGS(0.541)ER;AKS(1)PT(0.998)PDGS(0.003)ER;AKS(0.919)PT(0.89)PDGS(0.192)ER 109.83 0.0023908 9771200000.0 3385670.0 2904680.0 2640670.0 2697220.0 2765880.0 2828830.0 2848830.0 2680440.0 3219480.0 2662580.0 True False 3197860.1359341834 2765134.8127864334 2810891.813421386 2953562.9778512376 2983539.020295524 2811174.222668789 3136817.538301475 2671142.1792594 2634903.5884862617 2638991.612655892 1.2117735125030744 1.0477997730366373 1.0651385930675592 1.1192013508821879 1.130560251115341 1.065245607142954 1.1886424811879446 1.0121828983651644 0.9984509142999829 1.0 21.331555334767067 -7.392935611946073 7.703824834237447 1.0014019655164614 1.1119260974716214 0.5259234097128453 0.04976201313513873 0.22226391804245912 12.773060590351292 0.026626011717325312 0.012677745434208233 4.046358781503577e-08 7.392935611946073 0.11052413195515998 AKS(ph)PTPDGS(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 6 AKSPTPDGSER 11 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 2 AKS(0.798)PT(0.256)PDGS(0.945)ER;AKS(0.824)PT(0.177)PDGS(0.999)ER;AKS(0.613)PT(0.424)PDGS(0.963)ER;AKS(0.806)PT(0.205)PDGS(0.989)ER;AKS(0.967)PT(0.039)PDGS(0.994)ER;AKS(0.955)PT(0.209)PDGS(0.836)ER 146.27 0.00023444 22256890000.0 27556250.0 24200730.0 23039630.0 23562360.0 23667860.0 23365790.0 23586540.0 22873980.0 27988120.0 25049960.0 True False 26027649.8804775 23038090.604763694 24524801.414511383 25801719.610118143 25530385.930297595 23219955.437510297 25970897.64564728 22794635.50220708 22906182.9310895 24828036.842973985 1.0483168703627483 0.9279062517294104 0.9877865724793132 1.0392170663070246 1.0282885470069845 0.9352312300954735 1.0460310579487766 0.9181005991884401 0.9225934001935259 1.0 24.56546685609779 -6.2581557826187035 24.905976523277705 0.9643750331207417 1.002747544011094 0.16098961948718704 0.04749443903269468 615.0832402796093 4665381.295221615 0.016403213251960227 0.01574657238862732 5.518794431060462e-07 6.2581557826187035 0.03837251089035232 AKS(ph)PTPDGSER ddPTM_KYSE-520_SHP099_60min_R1 3 AKSPTPDGSER 11 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 AKS(0.823)PT(0.177)PDGSER;AKS(0.848)PT(0.152)PDGSER;AKS(0.838)PT(0.162)PDGSER 125.97 0.00012001 2346260000.0 994700.0 915880.0 904220.0 920030.0 913370.0 927550.0 872530.0 857670.0 1126120.0 800870.0 True False 939522.0081147103 871879.7500360921 962507.4680031524 1007469.3745828944 985247.0226355897 921760.8163927976 960733.8474721871 854694.9429516826 921644.9951750437 793774.9148674307 1.1836126218118408 1.0983967037830942 1.2125697725833298 1.2692129162977557 1.2412171311814975 1.1612370196238087 1.210335360160179 1.0767472326766918 1.1610911077090018 1.0 19.598370444977885 -8.110026417037172 0.758552319435098 1.0030163675546255 1.198292681386833 0.547260378994081 0.0524167255891275 0.650695473901812 0.8315980766442093 0.054712774448513565 0.020445030486556895 7.761999009118606e-09 8.110026417037172 0.19527631383220756 AKS(ph)PTPESSTIASYVTLR ddPTM_KYSE-520_SHP099_60min_R1 6 AKSPTPESSTIASYVTLR 18 1 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;A0JP02;Q9HAU0-5;H0YGJ6 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 AKS(0.874)PT(0.088)PES(0.027)S(0.011)TIASYVTLR;AKS(0.777)PT(0.204)PES(0.012)S(0.006)TIASYVTLR;AKS(0.957)PT(0.042)PESSTIASYVTLR;AKS(0.731)PT(0.268)PES(0.002)STIASYVTLR;AKS(0.816)PT(0.184)PESSTIASYVTLR;AKS(0.486)PT(0.486)PES(0.029)STIASYVTLR 206.32 9.1036e-14 7809920000.0 2975912.0 3132214.0 2576095.0 2386808.0 2365981.0 3047259.0 2543308.0 2911247.0 3570842.0 3002696.0 True False 2810832.2290265057 2981737.7378909355 2742154.205597734 2613649.5147000053 2552170.244109586 3028239.9262576643 2800410.3929340984 2901148.563647158 2922467.106401483 2976094.449502139 0.9444701022498532 1.0018962060796628 0.9213935418133185 0.8782145725036496 0.8575568710652076 1.017521445518723 0.9409682523357314 0.9748173698359881 0.9819806313238388 1.0 21.50498888194825 -6.279462025802001 24.991048064387417 0.9788530413852519 0.9228943373603183 0.3697088604767186 0.04046986105960543 1147.3200733763333 1590922.775733529 0.015767319597368334 0.013930472286209781 5.254579585264565e-07 6.279462025802001 -0.055958704024933525 AKS(ph)VDEIAK ddPTM_KYSE-520_SHP099_60min_R1 8 AKSVDEIAK 9 1 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 AKS(1)VDEIAK;AKS(1)VDEIAK;AKS(1)VDEIAK;AKS(1)VDEIAK;AKS(1)VDEIAK;AKS(1)VDEIAK;AKS(1)VDEIAK;AKS(1)VDEIAK 156.08 0.0001246 24441250000.0 28720800.0 29010500.0 27918800.0 25877100.0 29066900.0 24210800.0 26504400.0 24666500.0 29990100.0 26718400.0 True False 27127599.97050465 27616792.034351744 29718490.51965939 28336451.803766187 31354299.661962185 24059691.416659746 29183723.410016615 24580937.66870438 24544653.82889841 26481695.762600675 1.024390590908312 1.0428634284574076 1.1222276241701237 1.0700391718790505 1.1839989380983278 0.9085404360939205 1.1020337848315565 0.9282237017245444 0.9268535538257375 1.0 24.658492172684564 -7.26724154617477 24.81523942627179 0.9456539617745765 1.064998135967838 0.35318716210492507 0.0700443798778708 467.27020018337794 1998446.898869477 0.036406217652903014 0.018256959198680027 5.404536494924021e-08 7.26724154617477 0.11934417419326149 AKS(ph)VEDDAEGHLIYHVGDWLQER ddPTM_KYSE-520_SHP099_60min_R1 4 AKSVEDDAEGHLIYHVGDWLQER 23 1 B1AVT0;P49760-3;P49760 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 AKS(1)VEDDAEGHLIYHVGDWLQER;AKS(1)VEDDAEGHLIYHVGDWLQER;AKS(1)VEDDAEGHLIYHVGDWLQER;AKS(1)VEDDAEGHLIYHVGDWLQER 235.86 2.1678e-28 3709230000.0 885842.0 829184.0 758413.0 741986.0 751681.0 720570.0 638299.0 761317.0 955163.0 611137.0 True False 836702.5783777524 789348.7560094413 807301.5154837056 812504.1263537736 810834.0182201533 716072.6553481303 702824.4921179207 758676.1690197242 781729.4768997787 605722.801637391 1.3813291758473951 1.303151794642157 1.3327903676424375 1.3413794629447844 1.3386222477151353 1.182178800950602 1.160307140853942 1.2525138016413935 1.2905729729615696 1.0 19.208298195204968 -6.2593985610003955 24.095006495154497 1.1918461871326678 1.3371744964502914 0.5432223449077632 0.07380165767959768 95.67655591428118 1129612.4207626001 0.024126568207136462 0.023002785630684846 5.5030244070302e-07 6.2593985610003955 0.14532830931762364 AKSDESIKEEDKDQDEK ddPTM_KYSE-520_SHP099_60min_R1 1 AKSDESIKEEDKDQDEK 17 3 K7ENQ6;P26358;P26358-2 K7ENQ6;P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 0 114.23 7.106199999999999e-05 759590000.0 520860.0 563190.0 372540.0 319540.0 455940.0 455060.0 350650.0 435050.0 506240.0 411190.0 False True 491966.8574913322 536133.507034576 396554.52448507486 349908.98552679626 491819.88405626424 452219.8017440641 386097.1240142138 433540.9130914332 414319.57727188396 407547.1765009788 1.2071408805114139 1.3155127502969914 0.9730272894777924 0.8585729596533124 1.2067802512553611 1.1096133842138838 0.9473679276325118 1.0637809266981681 1.0166174645817694 1.0 18.63660754571811 -4.761694930072362 24.99999978221966 1.0254784204154015 1.2613268608185313 0.5194058410280643 0.09204666381925737 5.187771101826966 507752.9074054712 0.024777608248260318 0.057362437586194755 1.7310318946719874e-05 4.761694930072362 0.2358484404031298 AKSEENTKEEKPDSK ddPTM_KYSE-520_SHP099_60min_R1 2 AKSEENTKEEKPDSK 15 3 P50502;F6VDH7;Q3KNR6;Q8IZP2;Q8NFI4 P50502 ST13;ST13P4;ST13P5 Hsc70-interacting protein;Putative protein FAM10A4;Putative protein FAM10A5 0 ; 116.82 7.6914e-05 2849000000.0 3567370.0 3934840.0 2586860.0 2182820.0 3570810.0 3378260.0 1787730.0 3038350.0 3651820.0 2578750.0 False True 3369480.874724214 3745804.38008475 2753613.134722346 2390274.5565112354 3851812.431870313 3357175.026238082 1968451.1949634443 3027810.6730062203 2988741.5428907406 2555904.2812371394 1.3183126220569095 1.4655495542546926 1.0773537784402119 0.9351972114363634 1.5070253061299748 1.3134979470409205 0.7701584168913599 1.1846338281262485 1.1693479935187925 1.0 21.285402377608197 -1.0000000000000533 0.2174597948912431 1.0358579202463087 2.792613360073941 0.16889457481636017 0.2030460725840095 100.16684200868103 1.271396111472261 0.3430686793848474 61.55158606433883 0.09999999999998772 1.0000000000000533 1.7567554398276324 AKSPQPPVEEEDEHFDDT(ph)VVCLDTYNCDLHFK ddPTM_KYSE-520_SHP099_60min_R1 1 AKSPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 32 1 A0A1W2PPS1;Q00839-2;Q00839;Q5RI18;A0A1W2PP35;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 AKS(0.352)PQPPVEEEDEHFDDT(0.648)VVCLDTYNCDLHFK 124.29 0.00023975 97271000.0 60640.0 56977.0 68361.0 57752.0 58787.0 70196.0 64377.0 70273.0 77230.0 58348.0 True False 57276.17831715696 54239.73939577945 72767.65944146721 63240.73271622806 63413.20244772471 69757.88072611588 70884.85541897359 70029.23936484144 63206.978809867964 57831.08211405709 0.9904047481628353 0.9378994376900188 1.2582794023800477 1.0935422683515037 1.096524569999543 1.2062350932416621 1.2257224459188096 1.2109273561011118 1.092958604599656 1.0 15.819557477105363 -4.747060032520808 24.999452175576184 1.156625750792322 0.9641519794984731 0.479516933803691 0.07620552859767542 184.35842185245758 320514.1145227026 0.018881269893598538 0.04946262849423986 1.7903583557167006e-05 4.747060032520808 -0.19247377129384902 AKSPT(ph)PDGS(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 2 AKSPTPDGSER 11 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 2 AKS(0.062)PT(0.94)PDGS(0.998)ER;AKS(0.26)PT(0.779)PDGS(0.961)ER 115.06 0.00045093 16467500000.0 19132900.0 16386400.0 15739500.0 16380400.0 16898000.0 16601700.0 15547900.0 15907400.0 19009000.0 15429000.0 True False 18071559.89650942 15599172.74751217 16754093.354090404 17937188.29105315 18227776.46353193 16498082.632212065 17119633.46488122 15852220.942215068 15557444.777894372 15292311.063580364 1.181741583817767 1.020066403479237 1.0955893641211216 1.1729547101465738 1.191956950636622 1.0788482240269965 1.1194928872230923 1.0366138169899097 1.0173377139146378 1.0 23.866303115907964 -7.371494111034044 1.7371530876044798 1.00323471378824 1.1235300131855277 0.49421933702312715 0.04917864043200315 0.3574534865662044 1.935242595526658 0.04241971599596741 0.015275451153122318 4.2511447125196515e-08 7.371494111034044 0.12029529939728767 AKSPT(ph)PESSTIASYVTLR ddPTM_KYSE-520_SHP099_60min_R1 1 AKSPTPESSTIASYVTLR 18 1 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;A0JP02;Q9HAU0-5;H0YGJ6 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 AKS(0.001)PT(0.669)PES(0.24)S(0.086)T(0.004)IASYVTLR 235.54 5.5635e-23 2145000000.0 679740.0 708450.0 598150.0 544610.0 502680.0 613730.0 565940.0 665500.0 811800.0 670060.0 True False 642033.4671719043 674414.9985948709 636707.7060738389 596369.5706570323 542238.0561420434 609899.4834184158 623150.7382421346 663191.5358288673 664397.5838126483 664123.7896987912 0.9667376430877355 1.0154959196699567 0.9587184135695745 0.8979795331944239 0.8164713635510208 0.918352109770125 0.9383050990008358 0.9985962649066574 1.0004122636744894 1.0 19.341092652965735 -9.777516255066079 7.538883923270046 0.9999959524040991 0.9434435687372776 0.07746341651412547 0.05576704472664911 0.0 0.0 0.06136410524823245 0.014882981621175382 1.6691053336444473e-10 9.777516255066079 -0.05655238366682147 AKSPTPESS(ph)TIASYVTLR ddPTM_KYSE-520_SHP099_60min_R1 2 AKSPTPESSTIASYVTLR 18 1 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;A0JP02;Q9HAU0-5;H0YGJ6 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 AKSPT(0.019)PES(0.233)S(0.736)T(0.012)IASYVTLR;AKS(0.001)PT(0.116)PES(0.39)S(0.479)T(0.014)IASYVTLR 244.89 1.5129e-23 2487520000.0 1393500.0 1378240.0 1169450.0 1039610.0 1095550.0 1333860.0 1102060.0 1323770.0 1593570.0 1344410.0 True False 1316199.77712662 1312027.281619583 1244834.6181861581 1138414.221829855 1181763.552173182 1325534.8849697558 1213466.9798691147 1319178.150840242 1304217.8586306009 1332499.573335153 0.98776750361898 0.9846361739056101 0.9342101439255431 0.8543449053274247 0.886877246208275 0.9947732153129587 0.9106696948741919 0.9900026816056919 0.9787754418309005 1.0 20.34570364035939 -7.278291812236188 23.657283694023423 0.9882918169426061 0.9351799366299894 0.24460705982117936 0.042967948622225464 692.3576335700419 971915.5430136644 0.025653875022050222 0.012385770391471443 5.2687572280380284e-08 7.278291812236188 -0.05311188031261671 AKT(ph)PEPGAQQSGFPTLSR ddPTM_KYSE-520_SHP099_60min_R1 2 AKTPEPGAQQSGFPTLSR 18 1 Q9H9D4 Q9H9D4 ZNF408 Zinc finger protein 408 1 AKT(1)PEPGAQQSGFPTLSR;AKT(1)PEPGAQQSGFPTLSR 182.62 1.9977e-09 3483800000.0 370720.0 429770.0 403505.0 350940.0 431806.0 465900.0 416830.0 481410.0 610760.0 485510.0 True False 350155.42258800194 409123.2041020779 429515.57793082733 384293.23208604206 465786.6755599407 462992.1452831702 458967.2442687721 479740.1010719387 499861.3800066686 481208.7591210643 0.7276580401977025 0.8501989964799231 0.8925763918249215 0.798599827625665 0.9679513656623951 0.9621440518431813 0.9537799043955129 0.9969479814710603 1.03876201447304 1.0 18.876303377602323 -4.162933038246779 0.3230054056728202 1.0295909692621976 0.5252484348568826 0.7998214067008682 0.042205714825767744 3.3918419639984037 0.2729156370874501 0.044913959410628375 0.6851841347789976 6.871743839215283e-05 4.162933038246779 -0.5043425344053151 AKT(ph)QTPPVS(ph)PAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 3 AKT(0.503)QT(0.503)PPVS(0.995)PAPQPT(0.551)EERLPS(0.23)S(0.212)PVY(0.007)EDAASFK 85.359 0.0022509 2346800000.0 292150.0 304820.0 302360.0 274100.0 326110.0 291130.0 203900.0 243130.0 433150.0 238950.0 True False 275943.85711341375 290175.9896558522 321850.6093931047 300150.38158883 351773.00168791617 289312.9496808098 224512.2018722323 242286.63877696882 354500.8788229232 236833.08890028685 1.1651406414312047 1.2252341554267536 1.3589765302120116 1.2673498580057005 1.4853203296943955 1.221590070138461 0.9479764965053428 1.0230269760952957 1.4968384716384697 1.0 17.853511134193454 -6.527673582453587 24.99588025336786 1.11400850380146 1.3032267804609066 0.2244869843239945 0.16065642509101297 205.9583535676855 1073662.095117498 0.061258118798755694 0.047625934507714435 2.9670606068187896e-07 6.527673582453587 0.18921827665944657 AKT(ph)QTPPVS(ph)PAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 2 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 3 AKT(0.507)QT(0.507)PPVS(0.986)PAPQPT(0.121)EERLPS(0.442)S(0.415)PVY(0.02)EDAAS(0.002)FK;AKT(0.502)QT(0.502)PPVS(0.996)PAPQPT(0.012)EERLPS(0.511)S(0.461)PVY(0.016)EDAASFK 115.82 0.00057387 16378200000.0 548010.0 580540.0 626770.0 510790.0 516800.0 520740.0 515070.0 514460.0 899320.0 531430.0 True False 517610.7928691487 552649.9869916949 667172.5970674582 559335.328025387 557469.2198102333 517489.8685013054 567138.3021987771 512675.45833586657 736026.1580123072 526721.9436462835 0.9827021621425872 1.0492252955438348 1.2666504692189042 1.0619176489085194 1.0583747773086856 0.9824725830082792 1.0767318678100013 0.9733322572187163 1.3973713586282264 1.0 19.006682038979402 -4.522236890163306 24.99775631126223 1.0973085849875035 0.9993328885929347 0.07837838268674602 0.1265737262937989 54.48512465558004 2121827.768367841 0.03136733978885883 0.08520846885985003 3.0044370560857036e-05 4.522236890163306 -0.09797569639456882 AKT(ph)QTPPVS(ph)PAPQPTEERLPSSPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 AKT(0.409)QT(0.591)PPVS(0.728)PAPQPT(0.016)EERLPS(0.135)S(0.121)PVYEDAASFK 113.05 0.0010983 475900000.0 187970.0 197490.0 207760.0 138650.0 178170.0 134780.0 115020.0 123250.0 233330.0 134720.0 True False 177542.92939109472 188002.2839614666 221152.54202775334 151827.2543133573 192190.96535137208 133938.78802589743 126647.34408702367 122822.47451676612 190963.15377063944 133526.48561057402 1.3296457895918368 1.407977474295022 1.6562447593561183 1.1370572184170031 1.4393471412996763 1.0030877950051489 0.9484810710617131 0.919836045673921 1.4301518750937379 1.0 17.026766410126022 -6.261339865788997 24.999999520344225 1.0483117080734758 1.395116486222321 0.46632819777468915 0.17828180930351734 8.113982154686878 2038515.060734845 0.06049908767548453 0.05686649394612288 5.478480677145024e-07 6.261339865788997 0.34680477814884525 AKT(ph)QTPPVSPAPQPTEER ddPTM_KYSE-520_SHP099_60min_R1 1 AKTQTPPVSPAPQPTEER 18 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 AKT(0.625)QT(0.375)PPVSPAPQPTEER 89.311 0.0097933 1627600000.0 1481000.0 1740200.0 1368800.0 966840.0 1067000.0 1374300.0 907260.0 1088700.0 1415000.0 1303400.0 True False 1398845.9776996954 1656598.1799065466 1457035.038157436 1058728.1829089548 1150966.829600461 1365722.4839292995 998974.6948043224 1084923.553804491 1158071.669247225 1291852.8900298548 1.082821417589868 1.2823427440474762 1.1278645187872467 0.8195423728815496 0.8909426440760311 1.0571811190496603 0.7732882764857507 0.8398197365796181 0.8964423721809855 1.0 20.301010361563385 -5.152986893297251 4.940080477554388 0.8919162325939465 1.186495830078254 0.6488274685068434 0.09048638905658557 0.12964001421278504 4.83280211443538 0.024599639030485333 0.04384296215456297 7.03093538433329e-06 5.152986893297251 0.2945795974843075 AKTDHGAEIVYKS(ph)PVVS(ph)GDT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 AKTDHGAEIVYKSPVVSGDTSPR 23 2 A0A0G2JQJ7;A0A0G2JS76;A0A0G2JPD5;A0A0G2JMX7;P10636;P10636-9;I3L170;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 3 AKT(0.003)DHGAEIVY(0.002)KS(0.995)PVVS(0.997)GDT(0.582)S(0.421)PR 73.317 0.035506 812490000.0 384090.0 395050.0 379600.0 398100.0 352480.0 361340.0 286390.0 334620.0 528460.0 347940.0 True False 362783.76203556795 376071.2050178607 404069.6233814745 435935.30430687056 380218.1706631403 359084.7430277327 315341.09609705047 333459.28132089495 432504.9853925008 344857.5222932235 1.0519815824898906 1.0905118221492556 1.1717001870642234 1.264102639861241 1.1025369785608172 1.0412553585605484 0.9144097945148607 0.9669479705806246 1.2541555785602176 1.0 18.395640910713173 -6.175472916025384 3.8583643060914383 1.0253440740332405 1.1460024713094186 0.21215867905488583 0.09796133348560912 0.36376000152036675 10.133876665050106 0.035065995482743945 0.03474901942629769 6.676165343403183e-07 6.175472916025384 0.12065839727617811 AKTQT(ph)PPVS(ph)PAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 3 AKT(0.462)QT(0.547)PPVS(0.991)PAPQPT(0.549)EERLPS(0.235)S(0.216)PVYEDAASFK 117.43 0.00016665 2383800000.0 639230.0 757500.0 693890.0 592240.0 554180.0 641670.0 504690.0 574910.0 1021900.0 635270.0 True False 603770.6376265879 721108.5629693193 738619.2596632541 648526.3115365511 597790.8131471256 637665.0995145991 555708.9904997394 572915.7713950027 836348.7200026419 629642.0020325815 0.9589109933541967 1.1452675657619245 1.1730781257903335 1.0299921375051349 0.949413811685632 1.012742316198916 0.8825792890338082 0.909907168749134 1.3282924539703185 1.0 19.26417225750418 AKTQT(ph)PPVS(ph)PAPQPTEER ddPTM_KYSE-520_SHP099_60min_R1 14 AKTQTPPVSPAPQPTEER 18 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 AKT(0.002)QT(0.998)PPVS(1)PAPQPTEER;AKT(0.073)QT(0.969)PPVS(0.957)PAPQPT(0.001)EER;AKT(0.005)QT(0.995)PPVS(1)PAPQPTEER;AKT(0.009)QT(0.991)PPVS(1)PAPQPTEER;AKT(0.003)QT(0.997)PPVS(1)PAPQPTEER;AKT(0.034)QT(0.966)PPVS(1)PAPQPTEER;AKT(0.034)QT(0.966)PPVS(1)PAPQPTEER;AKT(0.089)QT(0.911)PPVS(0.995)PAPQPT(0.005)EER;AKTQT(1)PPVS(1)PAPQPTEER;AKT(0.006)QT(0.994)PPVS(1)PAPQPTEER;AKT(0.041)QT(0.959)PPVS(1)PAPQPTEER;AKT(0.007)QT(0.993)PPVS(1)PAPQPTEER;AKT(0.124)QT(0.876)PPVS(1)PAPQPTEER;AKT(0.132)QT(0.868)PPVS(1)PAPQPTEER 174.25 9.9408e-09 92600940000.0 30780400.0 30838320.0 29825200.0 28625020.0 31040160.0 32187250.0 29986960.0 32874100.0 45046900.0 35132410.0 True False 29072949.85279387 29356800.81793795 31747780.11400727 31345533.294373937 33482843.997648563 31986357.43349584 33018334.561326858 32760067.419972632 36867518.49993844 34821164.18000142 0.8349218223292809 0.8430735016837324 0.9117380438486526 0.9001862526002614 0.9615658978133337 0.9185895470969441 0.948226038355433 0.9408090795191585 1.0587675446277092 1.0 25.053461101796703 -2.4079190713577625 0.20710680389873298 1.0232146127957906 0.4176356972997065 0.7531625335603526 0.031751578998956025 14.308321019001376 0.2915889312946137 0.05685860928371067 2.5251045662064997 0.0039091373385873 2.4079190713577625 -0.6055789154960841 AKTQT(ph)PPVS(ph)PAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 2 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 3 AKT(0.463)QT(0.567)PPVS(0.967)PAPQPT(0.283)EERLPS(0.578)S(0.134)PVY(0.008)EDAASFK;AKT(0.174)QT(0.826)PPVS(1)PAPQPT(0.023)EERLPS(0.525)S(0.452)PVYEDAASFK 174.92 5.3054e-10 2281353000.0 1165450.0 1348665.0 1325064.0 927136.0 1043035.0 1079428.0 862842.0 971865.0 1913650.0 1100505.0 True False 1100800.1652330253 1283873.1090125644 1410479.7456173617 1015250.7266863973 1125115.920442658 1072690.889458515 950066.4898864187 968493.8271499962 1566179.3991907788 1090755.3818799336 1.0092090156234474 1.1770495294735923 1.2931219676279555 0.930777645980162 1.031501598922669 0.9834385484394454 0.871017008643097 0.8879111148466508 1.4358667628038146 1.0 20.056896161436327 -5.274320333725285 24.92092236241131 1.0081419317506393 1.1615191168065588 0.13147597456630533 0.16253417239879497 1353.1214671793107 2617896.3441933095 0.04562247928518396 0.06817318674570841 5.317159232342415e-06 5.274320333725285 0.15337718505591957 AKTQT(ph)PPVS(ph)PAPQPTEERLPSSPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 AKT(0.439)QT(0.561)PPVS(0.998)PAPQPTEERLPS(0.001)S(0.001)PVYEDAASFK 133.66 3.1342e-05 34040000000.0 416780.0 506950.0 516370.0 362030.0 388270.0 348920.0 258150.0 318500.0 677350.0 320670.0 True False 393660.3825696684 482595.36105253646 549656.0364212123 396437.2223517117 418824.64004589577 346742.26085469755 284246.3213012105 317395.19783845876 554360.314603963 317829.113277485 1.2385913250998435 1.5184114383857594 1.7294074502902055 1.2473282207020375 1.3177667575098295 1.0909707335462675 0.8943369547554487 0.9986347523845387 1.7442087318161168 1.0 18.27789175663524 -5.695614006709828 2.0708485140004296 1.141100652608185 1.4905558845143794 0.23633684414884348 0.2503166686726289 0.44524551384765576 3.9176162088743025 0.08514737262253078 0.11553913387732725 2.015514808116413e-06 5.695614006709828 0.3494552319061943 AKTQT(ph)PPVSPAPQPTEER ddPTM_KYSE-520_SHP099_60min_R1 4 AKTQTPPVSPAPQPTEER 18 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 AKT(0.013)QT(0.987)PPVSPAPQPTEER;AKT(0.152)QT(0.842)PPVS(0.007)PAPQPTEER;AKT(0.175)QT(0.825)PPVSPAPQPTEER;AKT(0.128)QT(0.869)PPVS(0.004)PAPQPTEER 118.5 0.00018371 15516600000.0 10896800.0 13057800.0 9377000.0 7979300.0 8010200.0 10411000.0 6830900.0 7934400.0 11370200.0 9831500.0 True False 10292332.78176775 12430483.68784262 9981456.423730467 8737650.27293598 8640557.168196453 10346021.087235626 7521434.035159554 7906877.418302876 9305658.299416823 9744400.558791248 1.0562304699679208 1.2756540141022867 1.0243273933074672 0.8966842260043392 0.8867202365158393 1.0617401270416378 0.7718724194249006 0.8114277908218185 0.9549749359411751 1.0 23.216142008018352 -5.00687249418511 4.166231314338471 0.9053703742294145 1.1665050149665273 0.5374238511764011 0.09372640629822301 0.14285536814737673 5.906057257478109 0.025394052524752575 0.051601748475119835 9.843000469360006e-06 5.00687249418511 0.2611346407371128 AKTQT(ph)PPVSPAPQPTEERLPSS(ph)PVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 AKT(0.214)QT(0.784)PPVS(0.047)PAPQPT(0.305)EERLPS(0.302)S(0.344)PVY(0.004)EDAASFK 113.51 0.0010745999999999998 13640000000.0 1024700.0 1214400.0 1119900.0 767910.0 832410.0 794770.0 687820.0 611880.0 1340900.0 696160.0 True False 967857.848311192 1156058.4011484366 1192090.5459033558 840891.9355194402 897915.9312349753 789809.5456250376 757351.558076306 609757.5310938659 1097426.3613382354 689992.5640042847 1.4027076504916969 1.6754650143465282 1.7276860767675652 1.2186970981823777 1.3013414608760907 1.1446638512181606 1.0976227826008906 0.883716090439026 1.5904901278492918 1.0 19.396221288600156 -5.339200369489655 5.5009852380128565 1.1686068661244953 1.6082262796291429 0.5045625991398652 0.1932299278727633 0.17217568410454134 9.093058528696924 0.05374575902767611 0.08095703285296771 4.579305635527855e-06 5.339200369489655 0.4396194135046476 AKTQT(ph)PPVSPAPQPTEERLPSSPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 1 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 AKT(0.028)QT(0.971)PPVS(0.001)PAPQPTEERLPSSPVYEDAASFK 139.85 1.5976e-06 3043300000.0 570720.0 860100.0 609320.0 357240.0 378280.0 489600.0 241120.0 287990.0 663950.0 412790.0 True False 539061.0238978863 818779.5049635802 648597.7421464705 391191.98219187785 408048.48388122104 486544.2247921007 265494.76270442706 286991.02990737156 543393.4168174522 409133.00174576003 1.3175691562345904 2.0012550966797327 1.5852980311510452 0.9561486864239054 0.9973492290773137 1.1892079659084673 0.648920428250881 0.701461453079532 1.328158360481326 1.0 18.642210387939144 -5.228210781430699 4.609722876651779 0.9561425057802334 1.6857060308725855 0.6058979894298373 0.24362587395601137 0.12696941127321149 6.691816484519772 0.06696909324479206 0.11540446285184865 5.912745940241976e-06 5.228210781430699 0.7295635250923521 AKTQTPPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 2 AKTQTPPVSPAPQPTEERLPSSPVYEDAASFK 32 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 AKTQTPPVSPAPQPT(0.003)EERLPS(0.498)S(0.498)PVYEDAASFK;AKTQTPPVSPAPQPTEERLPS(0.568)S(0.432)PVYEDAASFK 133.17 8.9523e-06 4062110000.0 1857290.0 2865560.0 2430890.0 1152560.0 1297140.0 1516640.0 743620.0 837990.0 2559940.0 1172510.0 True False 1754262.4212841778 2727894.196306751 2587589.0589615176 1262098.9558702002 1399217.5382829835 1507174.0871909582 818792.3666318269 835083.208278337 2095119.426835859 1162122.4735989766 1.5095331698141963 2.347337959878477 2.226606160491858 1.0860292133940121 1.2040189997786956 1.2969150166448389 0.7045663303421963 0.7185845100234299 1.8028387492993612 1.0 20.148330688619936 -5.26716397074452 24.58212895374152 1.0984559288198135 2.059777003731957 0.5782434771515945 0.3562689545940207 242.8273468629077 1042732.886474961 0.09948192184044463 0.1522982695762008 5.405501961234281e-06 5.26716397074452 0.9613210749121435 AKVDEFPLCGHMVSDEYEQLSSEALEAAR ddPTM_KYSE-520_SHP099_60min_R1 2 AKVDEFPLCGHMVSDEYEQLSSEALEAAR 29 1 X1WI28;P27635;B8A6G2;A6QRI9 X1WI28 RPL10 60S ribosomal protein L10 0 ; 241.46 5.3083e-31 1114750000.0 386900.0 381190.0 231840.0 386660.0 313720.0 297380.0 288940.0 303480.0 291060.0 235017.0 False True 365437.88573397114 362877.06022214476 246784.77735711556 423408.050146432 338407.9791773725 295523.94111248985 318148.87498265225 302427.2987127644 238210.84102551045 232934.93222045916 1.5688410589619326 1.5578473214086372 1.0594579997282174 1.8177095470837379 1.4528004707215374 1.2686973924237086 1.3658272374602154 1.2983338129230648 1.022649710606986 1.0 17.829567484797792 -7.469560313459934 0.8288988041723651 0.979426836655964 1.4785017008258619 0.4626064449089382 0.1859233394749372 0.5558431272476402 0.7369444398604054 0.17335566775222264 0.07081771715020505 3.3918738098728734e-08 7.469560313459934 0.4990748641698979 AKVPAQANGT(ph)PTTK ddPTM_KYSE-520_SHP099_60min_R1 3 AKVPAQANGTPTTK 14 1 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 AKVPAQANGT(0.993)PT(0.006)T(0.001)K;AKVPAQANGT(0.718)PT(0.229)T(0.053)K;AKVPAQANGT(0.998)PT(0.001)TK 84.65299999999999 0.013284 1844780000.0 2359860.0 2222640.0 1958450.0 1740280.0 1762760.0 2242300.0 1854500.0 2249790.0 2487940.0 2394130.0 True False 2228953.8615357187 2115861.0381493433 2084694.8206307932 1905675.6879657395 1901479.183267579 2228304.973961049 2041970.9581758433 2241986.0035949354 2036192.811863564 2372919.8708049557 0.939329595136982 0.891669821716984 0.87853570037475 0.8030931475656129 0.801324649290643 0.939056139811898 0.8605309362945973 0.9448216230050768 0.8580958998724364 1.0 21.178231953486826 -9.078239847195333 0.5205913577609456 1.0120226280293696 0.8708504067777844 0.34538221401640135 0.04945014130188123 5.642810045117545 1.7774133839457162 0.19810053285395798 0.02489158267564605 8.351416683480403e-10 9.078239847195333 -0.14117222125158524 AKVS(ph)PVNDVDVGVYQLMQSEQLLSR ddPTM_KYSE-520_SHP099_60min_R1 2 AKVSPVNDVDVGVYQLMQSEQLLSR 25 1 Q8WUX9 Q8WUX9 CHMP7 Charged multivesicular body protein 7 1 AKVS(1)PVNDVDVGVYQLMQSEQLLSR;AKVS(1)PVNDVDVGVYQLMQSEQLLSR 181.18 2.4666999999999997e-11 225510000.0 111154.0 127134.0 94272.0 99197.0 111801.0 124167.0 102121.0 132461.0 160946.0 126940.0 True False 104988.06603999446 121026.2918079755 100348.92396053308 108624.65305533451 120599.10263932642 123392.0276955901 112444.38728491531 132001.5237076298 131722.26351849033 125815.41035782557 0.8344611025104393 0.9619353580278476 0.7975884963148434 0.8633652487115874 0.9585399936012313 0.9807385863516779 0.8937250768019405 1.0491681689247017 1.0469485665060057 1.0 16.940949114342406 -6.522884266209288 0.7631428772977198 1.0310960181407083 0.8656209001826589 0.5546502297105207 0.05537585145236842 0.5285058316629482 0.6400092208570425 0.04365800400847756 0.03301272389691638 2.9999618630163057e-07 6.522884266209288 -0.16547511795804937 AKWDAWNELK ddPTM_KYSE-520_SHP099_60min_R1 4 AKWDAWNELK 10 1 B8ZWD1;A0A0A0MTI5;P07108;P07108-3;P07108-2;P07108-4;P07108-5 B8ZWD1 DBI Acyl-CoA-binding protein 0 ;;; 174.42 3.5361e-05 9586080000.0 18057700.0 16277900.0 11775100.0 9518000.0 16236600.0 15378700.0 12023700.0 12321600.0 13484200.0 12403500.0 False True 17056003.38386752 15495885.25037398 12534141.786826128 10422587.858308963 17514328.04638315 15282715.828860873 13239172.936003726 12278859.245483072 11035809.189020107 12293614.639776986 1.387387182991847 1.2604824296538293 1.0195652095902614 0.8478049917544866 1.424668704818038 1.243142580654221 1.0769145872823531 0.9987997513565968 0.8976862796164808 1.0 23.551405831847212 -4.581461059939235 4.007865896718144 1.0762688317673939 1.3652264555027807 0.31338091649427946 0.15799926310364557 0.2705560848398396 8.631219570881305 0.04406330378732145 0.14198514157905734 2.6214340732261884e-05 4.581461059939235 0.2889576237353868 AKYDAIFDSLS(ph)PVNGFLSGDK ddPTM_KYSE-520_SHP099_60min_R1 2 AKYDAIFDSLSPVNGFLSGDK 21 1 P42566;B1AUU8 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 AKYDAIFDSLS(1)PVNGFLSGDK;AKYDAIFDSLS(1)PVNGFLSGDK 268.71 7.6149e-36 714250000.0 745050.0 776600.0 776490.0 712490.0 784840.0 717340.0 657590.0 732930.0 930940.0 578410.0 True False 703720.5912796468 739290.970299634 826543.787827928 780204.83538207 846602.4428712517 712862.814976237 724065.6146599378 730387.6368971474 761904.7630876414 573285.7373961702 1.2275215400890733 1.2895680497084225 1.441765831436939 1.3609353669353683 1.4767547623223105 1.2434686029588276 1.263009992100276 1.2740376905494366 1.329013986198519 1.0 19.128894861542808 -9.871847655170917 0.40485117814012295 0.8801566568419571 1.346260072365566 0.6106773158204486 0.07783541442650545 9.385687543693999 1.1691699325980802 1.4421240363968273 0.054071226476925666 1.3432360681638333e-10 9.871847655170917 0.4661034155236089 AKYPDYEVTWANDGY ddPTM_KYSE-520_SHP099_60min_R1 2 AKYPDYEVTWANDGY 15 1 Q9NRX4 Q9NRX4 PHPT1 14 kDa phosphohistidine phosphatase 0 ; 165.7 7.977600000000001e-07 322410000.0 856900.0 947220.0 680170.0 589010.0 840640.0 967040.0 708710.0 710490.0 671650.0 667510.0 False True 809366.0488121996 901714.1293937943 724014.8465104778 644989.3333076861 906793.5854126828 961004.3446547247 780353.32314306 708025.4760196126 549695.2909186569 661596.3807149216 1.2233531990268718 1.3629369139223544 1.0943452346702784 0.9748985213775053 1.3706144892038268 1.452553811760975 1.1795005926420115 1.0701773719718957 0.8308619982543671 1.0 19.335591816656223 -7.420679161393502 2.774937758615766 0.9203920843644094 1.2408014165261412 0.4701569264798543 0.13732707597834864 0.2691717337157178 3.903054833617545 0.1065935287103433 0.0408391433661624 3.7959531056006186e-08 7.420679161393502 0.32040933216173173 ALAAGADS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 ALAAGADSPK 10 0 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 ALAAGADS(1)PK;ALAAGADS(1)PK 143.97 0.00021 2078460000.0 6452500.0 6570500.0 6265100.0 5831500.0 6154800.0 6552200.0 5605300.0 6180200.0 6988400.0 6186400.0 True False 6094566.962260149 6254843.317478434 6668958.370514429 6385724.006695594 6639147.743978374 6511305.289384814 6171938.42645622 6158762.328669529 5719482.723227787 6131593.308946373 0.9939613824954437 1.020100812679835 1.087638731809562 1.04144611114022 1.0827769242769978 1.0619271307319775 1.0065798749977402 1.0044309885464053 0.9327889889374608 1.0 22.54783057965682 -7.151830390391708 2.0179219949601306 0.9711313156294109 1.0492180256395576 0.49181894365003376 0.03167241839579425 0.29108860120368446 2.2600754803317002 0.02140447678502011 0.009713773669851537 7.049683339374553e-08 7.151830390391708 0.07808671001014666 ALAAGADS(ph)PKTEEARPSPAPGPGTPTGTPTR ddPTM_KYSE-520_SHP099_60min_R1 2 ALAAGADSPKTEEARPSPAPGPGTPTGTPTR 31 2 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 ALAAGADS(0.968)PKT(0.032)EEARPSPAPGPGTPTGTPTR;ALAAGADS(0.984)PKT(0.016)EEARPSPAPGPGTPTGTPTR 106.5 0.00048389 2670600000.0 561030.0 700420.0 617920.0 465640.0 453350.0 491830.0 328830.0 501620.0 830230.0 529260.0 True False 529908.5475144221 666770.7718481467 657752.1119069566 509894.2856002287 489026.06579134887 488760.30653492536 362071.34547153587 499879.99729898764 679481.1603951412 524571.1681580497 1.0101747478328131 1.2710778104511706 1.2538853673879011 0.9720211794915138 0.9322396949654859 0.9317330730377946 0.6902234957801688 0.9529307511395236 1.2953078660061206 1.0 19.000778989819956 -5.315457882451731 6.960057214283681 0.95046192126001 1.1873620250592267 0.2806104719914987 0.1526415592101744 0.2945963924530348 32.216192150674345 0.04481027181922831 0.06711638124543451 4.836621672165146e-06 5.315457882451731 0.23690010379921678 ALAEEAKR ddPTM_KYSE-520_SHP099_60min_R1 2 ALAEEAKR 8 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 133.58 0.0018563 1016670000.0 1250710.0 1216180.0 849670.0 684590.0 1097620.0 1109430.0 746350.0 947300.0 1087630.0 984410.0 False True 1181330.623071429 1157752.8872766034 904441.0877200672 749653.2277705115 1183996.449396493 1102505.6358478372 821798.3416740578 944014.0374014825 890143.8089211029 975688.8932593907 1.2107656766749395 1.186600457661262 0.9269769226322616 0.7683322347415645 1.2134979270300281 1.1299766180229867 0.8422749785833418 0.9675359060898038 0.91232340049243 1.0 19.896061679908126 -4.752105460031915 23.730906116283823 0.9715847020704602 1.1986833951652407 0.3604857030187657 0.12176212086607577 119.6353079120156 304152.55654583586 0.032902534832507706 0.08430439224556131 1.769679173709169e-05 4.752105460031915 0.22709869309478048 ALAEEAS(ph)EEELPS(ph)DVDLNDPYFAEEVK ddPTM_KYSE-520_SHP099_60min_R1 9 ALAEEASEEELPSDVDLNDPYFAEEVK 27 0 Q9H501 Q9H501 ESF1 ESF1 homolog 2 ALAEEAS(1)EEELPS(1)DVDLNDPYFAEEVK;ALAEEAS(1)EEELPS(1)DVDLNDPYFAEEVK;ALAEEAS(1)EEELPS(0.967)DVDLNDPY(0.033)FAEEVK;ALAEEAS(1)EEELPS(1)DVDLNDPYFAEEVK;ALAEEAS(1)EEELPS(1)DVDLNDPYFAEEVK;ALAEEAS(1)EEELPS(1)DVDLNDPYFAEEVK;ALAEEAS(1)EEELPS(1)DVDLNDPYFAEEVK;ALAEEAS(1)EEELPS(1)DVDLNDPYFAEEVK;ALAEEAS(1)EEELPS(1)DVDLNDPYFAEEVK 163.22 3.2472e-10 6271794000.0 2317154.0 2250992.0 2033992.0 2076768.0 2283488.0 2198759.0 2069828.0 2380548.0 2810929.0 2185800.0 True False 2188616.8484880193 2142850.965512126 2165106.378822269 2274143.406316935 2463185.514330549 2185035.7294927635 2279066.4138146103 2372290.4346120805 2300535.151353663 2166435.512526668 1.0102386319985504 0.9891136630293529 0.9993864882214523 1.0497166396910884 1.1369761528040074 1.0085856314940123 1.0519890394321423 1.0950201014039547 1.0618987447591262 1.0 21.046891862410927 -5.307904673388729 4.654755908363293 1.0633375745103963 0.998172870638183 0.3355222458220368 0.037230294738562666 0.21426716217776257 10.593388623783625 0.010420853156406918 0.016221623162029186 4.921475490493112e-06 5.307904673388729 -0.06516470387221329 ALAEEAS(ph)EEELPSDVDLNDPYFAEEVK ddPTM_KYSE-520_SHP099_60min_R1 3 ALAEEASEEELPSDVDLNDPYFAEEVK 27 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 ALAEEAS(1)EEELPSDVDLNDPYFAEEVK;ALAEEAS(1)EEELPSDVDLNDPYFAEEVK;ALAEEAS(1)EEELPSDVDLNDPYFAEEVK 168.69 2.3587999999999997e-10 250576000.0 506884.0 620475.0 430317.0 377788.0 451910.0 619535.0 428449.0 568081.0 666460.0 520479.0 True False 478766.1340717975 590666.4496480378 458055.9223515435 413692.8579338963 487472.745983828 615668.2522601609 471760.806179284 566110.4596021019 545447.664089404 515867.96098653466 0.9280788307849465 1.1449954141723788 0.8879324885297535 0.8019355517694083 0.9449564284852964 1.1934609218273031 0.9144991390376307 1.0973941054984004 1.0573396786385063 1.0 18.97664232224319 -6.061146247229773 24.999783748693325 1.05213297836991 0.9417897133266787 0.2223989504724445 0.10375476879728268 396.04081073522326 161921.0154592774 0.03526944186577056 0.0352694878352792 8.68667859000788e-07 6.061146247229773 -0.11034326504323133 ALAGCDFLTIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 ALAGCDFLTISPK 13 0 P37837;F2Z393 P37837 TALDO1 Transaldolase 1 ALAGCDFLTIS(1)PK;ALAGCDFLTIS(1)PK 184.76 3.2064e-08 514355000.0 1168850.0 1169360.0 804000.0 862400.0 931110.0 1130320.0 831290.0 1067960.0 1311640.0 1256930.0 True False 1104011.5604552915 1113182.190354856 855827.1264454843 944362.2367099859 1004383.0597087948 1123265.2536090845 915324.9058085731 1064255.496023739 1073479.2397536605 1245794.5780767433 0.8861906929789851 0.893551962694673 0.6869729099051864 0.7580400921056275 0.8062188400750312 0.9016456431711082 0.7347318104575884 0.8542784779708512 0.8616823821876773 1.0 20.248634768005136 -8.229394352213044 1.3622549520130474 0.9995825749017803 0.8094359735846481 0.40663034275398646 0.06777151535739936 0.8658969952835197 2.9776881815041807 0.06755577816924771 0.020144839674699235 5.896654034060626e-09 8.229394352213044 -0.19014660131713212 ALALDLGS(ph)PAALR ddPTM_KYSE-520_SHP099_60min_R1 4 ALALDLGSPAALR 13 0 Q8TER5-4;Q8TER5-3;Q8TER5;Q8TER5-2 Q8TER5-4 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 ALALDLGS(1)PAALR;ALALDLGS(1)PAALR;ALALDLGS(1)PAALR;ALALDLGS(1)PAALR 169.4 6.9013e-07 425263000.0 899120.0 968310.0 826300.0 645268.0 708367.0 855260.0 694242.0 818773.0 1095220.0 863380.0 True False 849244.0212487156 921790.9341370576 879564.6201267454 706594.0767131011 764111.4528431011 849922.0050974111 764422.7565089867 815932.8675660547 896355.6562494319 855731.1248994754 0.9924192267150247 1.077196922392349 1.0278516166279097 0.8257197338662963 0.8929340427261694 0.99321151278359 0.8932978295008086 0.9534921002924887 1.047473476385154 1.0 19.706798040095247 -5.035904007826206 24.89986420249317 0.9386497138879094 1.0392371799294358 0.29367648580848216 0.062718828440183 611.0283668349639 423755.1403404372 0.017260886980104563 0.029910661543080967 9.2065304134426e-06 5.035904007826206 0.10058746604152635 ALAMPGRPES(ph)PPVFR ddPTM_KYSE-520_SHP099_60min_R1 13 ALAMPGRPESPPVFR 15 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR;ALAMPGRPES(1)PPVFR 187.75 3.4837e-11 29336900000.0 6796940.0 6730030.0 6502660.0 4600140.0 5308660.0 6096490.0 5051960.0 5604460.0 7116600.0 5991420.0 True False 6419900.188836032 6406709.256819028 6921831.868223859 5037335.922517472 5726421.339856402 6058439.5445318585 5562661.419178239 5585019.436350797 5824404.834886794 5938340.680054221 1.081093277520988 1.078871961377691 1.1656171717249233 0.8482733130210841 0.9643133744566699 1.0202243136506175 0.9367366607749841 0.9405016884783717 0.9808135216037509 1.0 22.50162843181782 -5.250101896948143 24.999983026675803 0.9555985252788155 1.1055619208604286 0.6720383520235739 0.04886699322142827 442.26740745642013 975229.9146314686 0.013281353527540847 0.022743397302541643 5.622094005502324e-06 5.250101896948143 0.1499633955816131 ALANS(ph)LACQGK ddPTM_KYSE-520_SHP099_60min_R1 2 ALANSLACQGK 11 0 P04075;P04075-2;J3KPS3;H3BR68 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 ALANS(1)LACQGK;ALANS(1)LACQGK 179.46 5.9341999999999995e-05 0.0 1088420.0 1150740.0 1095030.0 828350.0 971870.0 1118160.0 906250.0 1124880.0 1371740.0 1144730.0 True False 1028043.1728885232 1095456.7231040448 1165617.3859099483 907076.1349474901 1048350.6398161195 1111181.1486796075 997862.5941476733 1120978.0538289668 1122666.59475137 1134588.5827864646 0.9060933526791942 0.9655100886117548 1.0273480657167193 0.7994758176746138 0.9239918819220345 0.9793692317532667 0.8794928922138433 0.9880039961938702 0.9894922369077475 1.0 20.11373782087097 -7.390815993636261 8.566049472250127 0.9926875740099695 0.9284859426552449 0.21773697557746385 0.057763089534408556 0.5219338749237447 33.54696904061446 0.03230219188841883 0.015434537479092373 4.0661557175159046e-08 7.390815993636261 -0.06420163135472468 ALAPS(ph)PPAEFIYYCVDEDELKR ddPTM_KYSE-520_SHP099_60min_R1 5 ALAPSPPAEFIYYCVDEDELKR 22 1 K7EPZ6;A0A0A0MS90;Q9UIS9-4;Q9UIS9-11;Q9UIS9-7;K7EN65 K7EPZ6 MBD1 Methyl-CpG-binding domain protein 1 1 ALAPS(0.999)PPAEFIYYCVDEDELKR;ALAPS(0.989)PPAEFIY(0.011)YCVDEDELKR;ALAPS(0.999)PPAEFIY(0.001)YCVDEDELKR;ALAPS(1)PPAEFIYYCVDEDELKR;ALAPS(0.984)PPAEFIY(0.009)Y(0.007)CVDEDELKR 111.44 0.00012497 3047722000.0 1813710.0 1826180.0 1523800.0 1356130.0 1338910.0 1510380.0 1584360.0 1786250.0 2049830.0 1860910.0 True False 1713099.890758754 1738447.5716479379 1622026.5861662035 1485016.1874646496 1444274.599644191 1500953.1581729872 1744522.5706635094 1780053.915663883 1677632.5440092175 1844423.7851660722 0.9287995007093808 0.9425423731951103 0.8794218547881912 0.8051382764677036 0.783049216378517 0.8137788995373648 0.9458360842524227 0.9651002822562315 0.9095700009410599 1.0 20.814738744892725 -6.827616040757379 8.41990684375439 0.9528161829039953 0.8577302774475641 0.4493769883113389 0.052223989472638434 0.3138787993062487 35.86386580406033 0.025195430621218044 0.01699400995089679 1.487249937145061e-07 6.827616040757379 -0.09508590545643114 ALAPS(ph)PPAEFIYYCVDEDELQPYTNRR ddPTM_KYSE-520_SHP099_60min_R1 2 ALAPSPPAEFIYYCVDEDELQPYTNRR 27 1 Q9UIS9-6;Q9UIS9-5;Q9UIS9;Q9UIS9-9;Q9UIS9-12 Q9UIS9-6 MBD1 Methyl-CpG-binding domain protein 1 1 ALAPS(0.82)PPAEFIY(0.09)Y(0.09)CVDEDELQPYTNRR;ALAPS(0.998)PPAEFIY(0.001)Y(0.001)CVDEDELQPYTNRR 88.395 0.0040988 308350000.0 178270.0 178383.0 175736.0 182941.0 171005.0 175594.0 187010.0 184354.0 228512.0 178107.0 True False 168381.0077275653 169813.2129216581 187064.22374754172 200327.65763678253 184462.12061464568 174498.05271271302 205914.79584171748 183714.51900254723 187019.9811187433 176529.1105451492 0.9538427243392249 0.961955863241188 1.0596791836193955 1.1348137257256876 1.044938820826764 0.9884944878147068 1.1664636795926788 1.040703816130996 1.0594285585034484 1.0 17.429546585276736 -4.763151239612905 5.524887684604553 1.066780360507539 0.9561465837638055 0.39406620759796374 0.05135695192730066 0.14549642406250482 14.269425388992762 0.01320960889212726 0.03204044195305907 1.7252369872523844e-05 4.763151239612905 -0.11063377674373354 ALAPTWEQLALGLEHSETVK ddPTM_KYSE-520_SHP099_60min_R1 1 ALAPTWEQLALGLEHSETVK 20 0 Q8NBS9-2;Q8NBS9 Q8NBS9-2 TXNDC5 Thioredoxin domain-containing protein 5 0 188.04 1.1201e-12 100570000.0 134780.0 78350.0 61524.0 79673.0 122160.0 79005.0 68472.0 69838.0 72184.0 63243.0 False True 127303.48472273105 74585.9483942524 65489.93548188055 87245.09796543902 131773.29700467893 78511.90048958317 75393.81798232226 69595.7482783118 59077.205210559536 62682.716222309435 2.0309184476186184 1.1898965598383957 1.0447845822381896 1.391852542828825 2.102226976529448 1.252528690861676 1.2027847950132196 1.11028609595482 0.9424799812605016 1.0 15.935780076838416 -6.707920489998523 2.8025427037029793 1.054149780572022 1.5039231082401379 0.3356632092176357 0.3179656856274329 0.3731646389547679 5.9700903152416815 0.14803878853884705 0.10396639324802628 1.95920332876706e-07 6.707920489998523 0.44977332766811595 ALAS(ph)IDSK ddPTM_KYSE-520_SHP099_60min_R1 3 ALASIDSK 8 0 P18206-2;P18206 P18206-2 VCL Vinculin 1 ALAS(0.999)IDS(0.001)K;ALAS(1)IDSK;ALAS(1)IDSK 123.51 0.00090197 1189570000.0 2829400.0 2473590.0 2214160.0 2027060.0 2264920.0 2601510.0 2312010.0 2579080.0 2964760.0 2648010.0 True False 2672447.5417309357 2354755.0234657144 2356888.29638126 2219711.1729421876 2443156.3183680205 2585273.011108861 2545730.5338431583 2570133.7734417985 2426434.3195176004 2624550.691520603 1.0182495428132052 0.8972031026390368 0.8980159171609424 0.8457490191039668 0.93088555167228 0.9850345125591818 0.9699681328571413 0.9792661965895288 0.9245141758385247 1.0 21.32363903187539 -6.069554536417516 5.762430907019205 0.9696166437823005 0.9095835376088938 0.2716015501722099 0.044143414208007506 0.29698278950960944 18.37520983709374 0.014837820064160474 0.015007476849150521 8.520115135352663e-07 6.069554536417516 -0.060033106173406736 ALASEKS(ph)PTADAKPAPK ddPTM_KYSE-520_SHP099_60min_R1 7 ALASEKSPTADAKPAPK 17 2 E9PDI4;O00515 E9PDI4 LAD1 Ladinin-1 1 ALAS(0.117)EKS(0.866)PT(0.017)ADAKPAPK;ALAS(0.15)EKS(0.573)PT(0.277)ADAKPAPK;ALAS(0.013)EKS(0.93)PT(0.057)ADAKPAPK;ALASEKS(0.542)PT(0.458)ADAKPAPK;ALASEKS(0.902)PT(0.098)ADAKPAPK;ALASEKS(0.5)PT(0.5)ADAKPAPK;ALASEKS(0.811)PT(0.189)ADAKPAPK 198.84 1.0366e-12 19823000000.0 18218810.0 16893420.0 15332200.0 12982390.0 14486920.0 15009150.0 14269110.0 15594040.0 19786050.0 15377680.0 True False 17208176.2910027 16081834.745659597 16320538.144387357 14216232.442302113 15626958.184700577 14915472.327488486 15711570.8918935 15539947.914916309 16193402.0857308 15241445.718854008 1.1290383214576423 1.0551384063104992 1.0707998732822628 0.9327351686012513 1.0252936941126052 0.9786126987309159 1.0308451823869922 1.0195849003807458 1.0624584035160918 1.0 23.861496419568862 -4.511122216637225 1.5473046735088902 1.0099209719413835 1.138172914098945 0.4973395187039008 0.03635175279562496 0.5697456812016729 1.8452401981157838 0.010419166878749293 0.09674862836155869 3.082320419430808e-05 4.511122216637225 0.12825194215756142 ALASEKSPT(ph)ADAKPAPK ddPTM_KYSE-520_SHP099_60min_R1 1 ALASEKSPTADAKPAPK 17 2 E9PDI4;O00515 E9PDI4 LAD1 Ladinin-1 1 ALASEKS(0.339)PT(0.661)ADAKPAPK 171.29 5.7517e-08 4422300000.0 2881200.0 2437900.0 2273300.0 2057500.0 2251700.0 2354400.0 2284400.0 2558500.0 3086100.0 2428800.0 True False 2721374.0924701933 2320779.624637499 2419840.5554086016 2253044.1813900704 2428895.9795795293 2339705.3162796623 2515329.445595525 2549625.1606583907 2525742.034250082 2407282.721577805 1.130475480954943 0.9640660832377805 1.005216601157078 0.9359283648716417 1.0089782798704916 0.9719279315668206 1.0448832715198917 1.0591299218013288 1.0492087246796817 1.0 21.198974157362453 -6.783858035566485 24.08846516660091 1.0432330159335925 0.9983621632577401 0.09934730043576412 0.05054386483317087 305.28094925233955 328014.6122195033 0.02063037545936833 0.013922790188840016 1.6449093318387472e-07 6.783858035566485 -0.044870852675852446 ALASNTSFFSGCS(ph)PIEEEAH ddPTM_KYSE-520_SHP099_60min_R1 4 ALASNTSFFSGCSPIEEEAH 20 0 O95239;Q2VIQ3 O95239 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B 1 ALASNTSFFSGCS(1)PIEEEAH;ALASNTSFFSGCS(1)PIEEEAH;ALASNTSFFSGCS(1)PIEEEAH;ALASNTSFFS(0.034)GCS(0.966)PIEEEAH 229.96 1.2769e-19 1162940000.0 938110.0 1076310.0 938160.0 751690.0 841150.0 1008080.0 744310.0 980740.0 1184570.0 1146650.0 True False 886071.1682240774 1024602.4520257539 998635.2947090727 823130.3915961599 907343.7195111793 1001788.1987917116 819552.118565577 977338.0418464357 969481.9485796366 1136491.5730802016 0.7796548511332849 0.9015486575486014 0.8787001314954752 0.7242732028054132 0.7983725889423278 0.881474374751933 0.7211246770131058 0.8599606587469747 0.8530480749206759 1.0 20.116155556145596 -8.289242666670301 1.605827132427186 0.9996338348975023 0.8173151081789682 0.453503672211081 0.06009039043742085 1.035065270334918 4.2482376632906425 0.058161886025296664 0.016695032194821945 5.137565044443648e-09 8.289242666670301 -0.1823187267185341 ALASQLQDS(ph)LKDLK ddPTM_KYSE-520_SHP099_60min_R1 1 ALASQLQDSLKDLK 14 1 P18206-2;P18206 P18206-2 VCL Vinculin 1 ALASQLQDS(1)LKDLK 153.21 1.1651999999999999e-06 332540000.0 179350.0 143540.0 149370.0 120720.0 134280.0 157470.0 110690.0 122230.0 207270.0 166660.0 True False 169401.09797463875 136644.1229420673 158998.6292004501 132193.19250420856 144847.07205131184 156487.17131946937 121879.62543029607 121806.01265869648 169634.9928515 165183.52205951783 1.0255326673177563 0.8272261133458131 0.9625574465179448 0.8002807474741797 0.8768857222884587 0.9473534004383619 0.7378437262427496 0.7373980839009362 1.0269486371066616 1.0 17.333710251819458 -4.251462869447072 23.89560834332502 0.8691187746143764 1.0255328262226806 0.15639346266835763 0.09900963601239114 1289.1678284950347 3087681.027236436 0.02388380060598951 0.29895768062963096 5.604503317218768e-05 4.251462869447072 0.15641405160830424 ALAT(ph)PPKLHTCEK ddPTM_KYSE-520_SHP099_60min_R1 3 ALATPPKLHTCEK 13 1 Q96JY6;Q96JY6-3;Q96JY6-5;A0A087WVI1;H0YBP7;E5RGS7;B3KPU0 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 ALAT(0.997)PPKLHT(0.003)CEK;ALAT(1)PPKLHTCEK;ALAT(1)PPKLHTCEK 157.91 2.9744e-06 2208270000.0 2542070.0 2447820.0 2156900.0 1550580.0 1708570.0 2273700.0 1719060.0 2146820.0 2872980.0 2180560.0 True False 2401056.3096090867 2330223.052947276 2295937.2251620223 1697946.6570011217 1843024.7385665018 2259508.994913808 1892839.3612088282 2139373.1824915563 2351319.2539320835 2161241.9348500106 1.1109613740563105 1.0781870439271264 1.0623230967991373 0.7856346990226981 0.8527618814200026 1.0454678666368822 0.8758109541957368 0.9898813955042142 1.0879481912770048 1.0 21.04342914946768 -2.009584381536418 10.159095587800401 0.9821387891469178 1.0985875063908375 0.0 0.10700143524170962 0.0 0.0 0.02612831067845352 0.0 0.009781728815666663 2.009584381536418 0.1164487172439197 ALDFIASK ddPTM_KYSE-520_SHP099_60min_R1 3 ALDFIASK 8 0 P12814-3;P12814;P12814-2;P12814-4;H9KV75;G3V2N5;G3V2W4;Q08043;G3V2X9;A0A087WSZ2;G3V5M4;G3V2E8;O43707 P12814-3;O43707 ACTN1;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-3;Alpha-actinin-4 0 ;; 104.06 0.015307 1419548000.0 3337410.0 4241430.0 2775630.0 2199190.0 3872360.0 4289920.0 3143010.0 3440150.0 3257510.0 3690780.0 False True 3152277.2143381047 4037665.3362837746 2954551.550965024 2408200.356389417 4177092.7012855145 4263145.018014974 3460736.1236216053 3428216.922587045 2666028.299144543 3658082.560583392 0.8617293792941016 1.10376550266811 0.8076776568142386 0.6583231287172907 1.1418803791621779 1.1654042650516576 0.9460519456044442 0.937162260777491 0.7288048465257613 1.0 21.802656205482457 -3.972959987548564 16.557973498500164 0.9438002712899294 0.6317476378484721 0.022182473650010026 0.16229296841950405 18152424.431951523 294523838.25434136 0.042552061015183634 154969952.28106508 0.00010642410644443729 3.972959987548564 -0.3120526334414573 ALDIDS(ph)DEESEPK ddPTM_KYSE-520_SHP099_60min_R1 7 ALDIDSDEESEPK 13 0 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 ALDIDS(1)DEESEPK;ALDIDS(1)DEESEPK;ALDIDS(1)DEESEPK;ALDIDS(1)DEESEPK;ALDIDS(1)DEESEPK;ALDIDS(1)DEESEPK;ALDIDS(0.974)DEES(0.026)EPK 271.08 3.3931999999999993e-34 5256410000.0 4325860.0 4073250.0 3980800.0 3992323.0 4215070.0 4170080.0 4175180.0 4325920.0 4811230.0 4232650.0 True False 4085895.922411881 3877564.955927098 4237408.737505204 4371752.177584325 4546772.028532343 4144052.9839073694 4597247.9402300455 4310914.393197321 3937631.913238396 4195152.013951868 0.9739565834142285 0.9242966507605526 1.0100727514552041 1.0420962489666967 1.0838157981906469 0.9878195045436834 1.095847760686841 1.02759432288996 0.9386148344906134 1.0 22.000291657891786 -4.8984535017306134 5.176224930864566 1.0298246473003771 0.9499597189396366 0.3083724978090445 0.04437032607458063 0.2213962842926985 9.297462584466974 0.01164704582260409 0.02523294501041399 1.2634163657832537e-05 4.8984535017306134 -0.07986492836074055 ALDQASEEIWNDFR ddPTM_KYSE-520_SHP099_60min_R1 3 ALDQASEEIWNDFR 14 0 P50579-3;P50579;G3V1U3;F8VQZ7;P50579-2;F8VRR3;F8VZX9;F8VY03 P50579-3 METAP2 Methionine aminopeptidase 2 0 ;; 176.05 1.0102e-07 102930000.0 89654.0 119889.0 99062.0 68182.0 99465.0 118850.0 84975.0 85687.0 85309.0 99088.0 False True 84680.71389918191 114129.35248294231 105447.69502480408 74661.99678033429 107292.3296215651 118108.21306483091 93565.10227608122 85389.77179649619 69819.03606488452 98210.15740929754 0.8622398755178576 1.1620931632081644 1.0736943897294005 0.7602268314180103 1.0924769133035497 1.2026069011640708 0.9527029051195007 0.8694596775833328 0.7109146131790516 1.0 16.58358462288979 -7.160838487767216 3.6706645713201 0.8413549374616969 1.0276330288333522 0.20988509802310618 0.1407668633789009 0.3522878748925957 8.672745923081889 0.07408967168387426 0.0397330788973122 6.904965487655377e-08 7.160838487767216 0.1862780913716553 ALDVS(ph)ASDDEIAR ddPTM_KYSE-520_SHP099_60min_R1 1 ALDVSASDDEIAR 13 0 H7C393;C9JIF9;P13798;C9JLK2;H7C1U0 H7C393 APEH Acylamino-acid-releasing enzyme 1 ALDVS(0.588)AS(0.412)DDEIAR 135.02 0.00032904 311430000.0 877840.0 852100.0 751930.0 624960.0 797330.0 770530.0 769280.0 773640.0 959070.0 765570.0 True False 829144.4652693452 811163.8369718236 800400.6109305386 684356.0104989237 860075.3348128735 765720.836456409 847046.3298492921 770956.4234089333 784927.0641872346 758787.6454044471 1.0927226745071694 1.0690261522898927 1.0548413851729375 0.9019071602492289 1.133486213200583 1.009137195490665 1.1163153946685591 1.0160371324944282 1.0344489251256255 1.0 19.533336663388045 -8.239118666006132 0.0055055089192356695 9.553826470507962e-08 2.0625238382886373 0.05692211585613016 0.06184407085758573 24670.295939518517 71.60759472347647 13548.56124179649 13272.618639010134 5.766088900732035e-09 8.239118666006132 2.0625237427503724 ALDVSAS(ph)DDEIAR ddPTM_KYSE-520_SHP099_60min_R1 1 ALDVSASDDEIAR 13 0 H7C393;C9JIF9;P13798;C9JLK2;H7C1U0 H7C393 APEH Acylamino-acid-releasing enzyme 1 ALDVS(0.049)AS(0.951)DDEIAR 157.68 2.0534e-05 305920000.0 983660.0 1028900.0 820160.0 735660.0 835690.0 851190.0 794910.0 807400.0 995570.0 832220.0 True False 929094.4189224057 979470.0995896151 873028.8259023989 805576.9052157555 901454.0485743292 845877.4074771005 875267.2603739874 804599.3178485758 814799.5842773577 824847.178257363 1.1263837028396988 1.1874564469735116 1.0584128174467762 0.9766377656982237 1.0928740163466546 1.0254959097564806 1.061126574043868 0.975452591773952 0.9878188417868717 1.0 19.653767326409803 -4.8975658425256965 4.819746326337534 1.0211023572398208 1.155540058654682 0.6770224931467375 0.03797952317731692 0.11603569422034202 4.440653634705276 0.010138724469063084 0.0221968872637578 1.2660013170100423e-05 4.8975658425256965 0.13443770141486122 ALDYY(ph)MLR ddPTM_KYSE-520_SHP099_60min_R1 2 ALDYYMLR 8 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 ALDY(0.477)Y(0.523)MLR;ALDY(0.4)Y(0.6)MLR 91.065 0.017274 393750000.0 1493630.0 1395240.0 1231540.0 1175290.0 1387060.0 1408120.0 1189010.0 1303990.0 1571720.0 1395730.0 True False 1410775.3664224148 1328210.576102063 1310927.0389336704 1286989.2082361772 1496213.7307081684 1399331.400764406 1309206.734419336 1299466.7630435526 1286335.2678369267 1383364.918061508 1.0198143295402609 0.9601303016728716 0.947636463682089 0.9303324028482803 1.0815755923641563 1.0115417721632491 0.9463928984507652 0.9393521160450412 0.9298596856420591 1.0 20.399750344781022 -6.779521572683899 24.847671957966803 0.9488471650355379 0.9896712425171824 0.14844333764787998 0.04366616617940325 462.15155751700485 635060.3707531019 0.019486356863957333 0.013168077770275968 1.6614161482916808e-07 6.779521572683899 0.040824077481644516 ALEEALSIQT(ph)PPS(ph)SPPTAFGS(ph)PEGAGALLR ddPTM_KYSE-520_SHP099_60min_R1 1 ALEEALSIQTPPSSPPTAFGSPEGAGALLR 30 0 Q15025-4;Q15025-3;Q15025;E7EMV7;A0A0A0MRZ4;Q15025-7;Q15025-8;Q15025-5;Q15025-6;Q15025-2;H0YC17 Q15025-4 TNIP1 TNFAIP3-interacting protein 1 3 ALEEALS(0.059)IQT(0.901)PPS(0.514)S(0.514)PPT(0.098)AFGS(0.915)PEGAGALLR 67.406 0.020468 22568000.0 31572.0 35239.0 25305.0 19300.0 29493.0 30004.0 25162.0 25863.0 35336.0 30473.0 True False 29820.638222778372 33546.06554518265 26936.20078943155 21134.26619724341 31813.931307784824 29816.73390658131 27705.62051745517 25773.28728946959 28919.873148070645 30203.032927635246 0.9873391951803956 1.1106853283760318 0.8918376129301041 0.6997398654592045 1.0533356495690085 0.9872099261693524 0.9173125289713873 0.8533344101971787 0.9575155322103254 1.0 14.882405808899719 -4.771945023148839 24.92744133671086 0.913992449752798 1.0490122685367353 0.22292157474377072 0.09579220631391178 257.04740670659436 609917.2961371845 0.025706663991143724 0.054430754285359956 1.6906549362090433e-05 4.771945023148839 0.13501981878393732 ALEEALSIQT(ph)PPSS(ph)PPTAFGS(ph)PEGAGALLR ddPTM_KYSE-520_SHP099_60min_R1 1 ALEEALSIQTPPSSPPTAFGSPEGAGALLR 30 0 Q15025-4;Q15025-3;Q15025;E7EMV7;A0A0A0MRZ4;Q15025-7;Q15025-8;Q15025-5;Q15025-6;Q15025-2;H0YC17 Q15025-4 TNIP1 TNFAIP3-interacting protein 1 3 ALEEALS(0.001)IQT(0.996)PPS(0.196)S(0.795)PPT(0.035)AFGS(0.977)PEGAGALLR 94.48 0.0022535999999999997 20715000.0 24177.0 24686.0 19528.0 17884.0 18115.0 19238.0 18263.0 22679.0 26314.0 21689.0 True False 22835.85361434537 23500.04750555858 20786.806125904724 19583.689982979326 19540.547439749156 19117.92850602623 20109.20226970366 22600.33184231839 21536.040921958644 21496.85233378667 1.0622882485197234 1.093185511100315 0.9669697592532668 0.9110026751311668 0.9089957513936687 0.8893361785798993 0.9354486860431172 1.0513321434876943 1.0018229919228863 1.0 14.391837808904373 -4.803199462066008 6.09068887051637 0.9526158008415204 1.0779277904989346 0.4976231616667697 0.04790575024824958 0.14651455075447412 13.594815223981175 0.014209601163799004 0.03123227704365883 1.573260134146292e-05 4.803199462066008 0.1253119896574142 ALEEALSIQT(ph)PPSS(ph)PPTAFGSPEGAGALLR ddPTM_KYSE-520_SHP099_60min_R1 1 ALEEALSIQTPPSSPPTAFGSPEGAGALLR 30 0 Q15025-4;Q15025-3;Q15025;E7EMV7;A0A0A0MRZ4;Q15025-7;Q15025-8;Q15025-5;Q15025-6;Q15025-2;H0YC17 Q15025-4 TNIP1 TNFAIP3-interacting protein 1 2 ALEEALSIQT(0.809)PPS(0.217)S(0.854)PPT(0.118)AFGS(0.002)PEGAGALLR 124.79 0.00019049 132920000.0 67230.0 92615.0 76680.0 57364.0 75049.0 63732.0 60248.0 66565.0 79676.0 69322.0 True False 63500.61788031772 88165.63638205089 81622.91549233792 62815.85731288449 80954.92932960167 63334.22494781497 66338.45580381679 66334.1015513878 65208.846868510154 68707.86101169993 0.924211828825591 1.2831957665955804 1.1879705508288019 0.9142455664889331 1.1782484294747035 0.9217900836271135 0.9655147872020107 0.9654514137777055 0.9490740347368121 1.0 16.0681875498271 -5.959726349420871 1.113465557746457 0.9588689789974156 1.1256048585350629 0.21983066425301578 0.11280433070906352 0.6779539154191682 1.7864111194077386 0.05172764842306417 0.0626020653537339 1.0971693088734933e-06 5.959726349420871 0.16673587953764724 ALEEALSIQT(ph)PPSSPPTAFGS(ph)PEGAGALLR ddPTM_KYSE-520_SHP099_60min_R1 1 ALEEALSIQTPPSSPPTAFGSPEGAGALLR 30 0 Q15025-4;Q15025-3;Q15025;E7EMV7;A0A0A0MRZ4;Q15025-7;Q15025-8;Q15025-5;Q15025-6;Q15025-2;H0YC17 Q15025-4 TNIP1 TNFAIP3-interacting protein 1 2 ALEEALS(0.101)IQT(0.812)PPS(0.051)S(0.058)PPT(0.038)AFGS(0.941)PEGAGALLR 61.911 0.0028158000000000002 0.0 27089.0 24880.0 31606.0 30647.0 25210.0 27709.0 19662.0 24401.0 43042.0 18142.0 True False 25586.319169417297 23684.727454358635 33643.37333138801 33559.68166564345 27193.88357472128 27536.05785286833 21649.626842627924 24316.35862623622 35226.65780052234 17981.275994262414 1.4229423527886202 1.3171883609325676 1.8710225760465031 1.866368197471186 1.5123444845292673 1.5313739615394768 1.2040094846181122 1.3523155216568192 1.9590744178423545 1.0 14.134207781117981 -6.333878858352875 2.8706739159568904 1.4081322600692288 1.616217771742204 0.11204229085501505 0.27991901468609925 0.6971750910217449 11.280829177073324 0.10951442790159006 0.09693204477933616 4.635762111652048e-07 6.333878858352875 0.20808551167297518 ALEEGDGSVSGSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 ALEEGDGSVSGSSPR 15 0 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 ALEEGDGSVSGS(0.026)S(0.974)PR 194.01 1.0672999999999998e-09 402300000.0 878060.0 837270.0 863450.0 803390.0 812110.0 822460.0 797590.0 844650.0 927360.0 879060.0 True False 829352.2614307854 797046.2924321073 919109.3685688467 879743.9440519887 876018.4367261757 817326.7220639527 878218.180928268 841720.106292792 758974.8008431852 871272.2122983302 0.9518865054160697 0.9148074289315136 1.0549049488727833 1.0097234040453453 1.0054474644787827 0.9380842296208729 1.0079722141162004 0.9660816612897792 0.8711109916395526 1.0 19.732764006094094 -7.535321503920604 24.980046749888682 0.9299024202450595 0.9837678590835939 0.1324177823830952 0.047978214175706115 415.96736869240436 835076.7327105845 0.03208350822224135 0.01214261432597658 2.9152680707841294e-08 7.535321503920604 0.05386543883853434 ALEHAFQLEHIMDLTR ddPTM_KYSE-520_SHP099_60min_R1 1 ALEHAFQLEHIMDLTR 16 0 Q14204;A0A2R8YFZ7;A0A2R8YGC7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 150.91 7.8779e-06 382260000.0 32745.0 28140.0 17719.0 20925.0 39373.0 31156.0 14508.0 21619.0 22992.0 19443.0 False True 30928.569574460827 26788.112160998877 18861.195091402387 22913.705708669346 42471.43109827457 30961.543847268604 15974.610224435242 21544.00873491254 18817.2323811535 19270.75014642511 1.6049489168535735 1.390091820892001 0.9787473216189926 1.1890406722397382 2.203932424818106 1.6066600216396991 0.8289563251588662 1.1179641981352313 0.9764660035636576 1.0 14.2341251116119 -6.758581872631367 24.999974339859698 0.9906769550915878 1.4855489272270255 0.40273541855410644 0.3068421339907002 90.26996266996423 789770.6809981882 0.13403272356258183 0.09915333517882687 1.7434846470227646e-07 6.758581872631367 0.49487197213543765 ALELDHK ddPTM_KYSE-520_SHP099_60min_R1 1 ALELDHK 7 0 Q99615;A0A6I8PU73;A0A6I8PUD4;A0A6I8PS32;A0A6I8PRZ0;Q99615-2;K7ELJ8;K7ESP1;K7EK03;K7EIH8;A0A6I8PR89;A0A6I8PU89;A0A6I8PLE7;K7ER44;K7EJE9;K7EJL5;K7EPP7;K7EJV7;K7EN19;A0A6I8PUC2 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 0 129.4 0.001233 0.0 169460.0 166450.0 114890.0 102970.0 156060.0 158980.0 118420.0 139670.0 153870.0 144020.0 False True 160059.71598986513 158453.4921534564 122295.99323049965 112756.23784094062 168341.0341400637 157987.74684936312 130391.04926782628 139185.51736922303 125931.08674704623 142744.09484586449 1.1213053413011453 1.1100528699597345 0.8567499297435403 0.7899187560977227 1.1793204778231903 1.1067900708604357 0.9134601988868467 0.9750702298369399 0.8822157363709301 1.0 17.123071538674303 -4.662960493598721 9.70481235375052 0.9670481140510071 1.117834917281691 0.23769168518695294 0.10926036336799369 0.478301727227686 43.06014443725849 0.029918991610233946 0.07934614412830311 2.1728988316372063e-05 4.662960493598721 0.15078680323068394 ALELDSNLY(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 ALELDSNLYR 10 0 P35579;P35579-2 P35579 MYH9 Myosin-9 1 ALELDS(0.001)NLY(0.999)R 111.06 0.0033179999999999998 103090000.0 500070.0 468930.0 468690.0 375690.0 417000.0 461560.0 407980.0 461560.0 495340.0 467620.0 True False 472330.12023516925 446401.89892172004 498902.5073305145 411395.46464468294 449815.5275945572 458679.2328330114 449222.59990109515 459958.95608891407 405398.74250524415 463477.25060285506 1.0191009798664317 0.9631581665358446 1.076433647350719 0.8876281718456986 0.9705234226911295 0.9896477814960654 0.9692441200011035 0.9924089164907993 0.8746896249555574 1.0 18.82213900153376 -5.257048843647003 24.99843773145667 0.9572604321111297 1.0139236483202618 0.2767704677737701 0.047548476212095445 554.175817468752 3155306.010308361 0.01263402718713978 0.02091044582203319 5.532878792802141e-06 5.257048843647003 0.05666321620913217 ALELPLAASS(ph)IPRPR ddPTM_KYSE-520_SHP099_60min_R1 2 ALELPLAASSIPRPR 15 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 ALELPLAAS(0.171)S(0.829)IPRPR;ALELPLAAS(0.073)S(0.927)IPRPR 115.57 0.00010649 121028000.0 200592.0 208219.0 197253.0 149410.0 168420.0 187795.0 156119.0 192080.0 223801.0 190663.0 True False 189464.7618897615 198215.846696909 209968.24399595894 163609.8814782454 181673.69582128365 186622.90174598186 171901.03209461036 191413.7193118092 183164.37996409787 188973.87415356922 1.0025976486876347 1.0489060860118118 1.1110966790326195 0.8657804271149575 0.9613693778307518 0.9875592728459551 0.909655013766164 1.0129110183572636 0.9692576859341399 1.0 17.527827268489407 -5.248218540544989 24.998151656894404 0.9579622080897581 1.0536707279689919 0.46236085267948 0.047499164926872346 700.8626470614888 1325198.835871289 0.01281788766200599 0.022034003115150077 5.646527654077178e-06 5.248218540544989 0.09570851987923379 ALENDFFNS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 5 ALENDFFNSPPR 12 0 F5H148;H3BMT1;Q9NYV6-2;Q9NYV6-3;Q9NYV6;A6NIE6 F5H148 RRN3;RRN3P2 RNA polymerase I-specific transcription initiation factor RRN3;Putative RRN3-like protein RRN3P2 1 ALENDFFNS(1)PPR;ALENDFFNS(1)PPR;ALENDFFNS(1)PPR;ALENDFFNS(1)PPR;ALENDFFNS(1)PPR 160.5 3.7635e-06 1172668000.0 1769660.0 1808540.0 1738390.0 1315810.0 1722540.0 1846240.0 1526050.0 1824330.0 2086580.0 1825860.0 True False 1671493.4320702504 1721655.023726114 1850449.4009223422 1440864.186787298 1858094.0980880768 1834716.9313320457 1680318.0268127532 1818001.825031822 1707709.6704013278 1809684.3008975848 0.9236381346963152 0.95135655587673 1.022526083695669 0.7961964338601181 1.0267504100944465 1.0138325952333482 0.928514451929175 1.0045961188534995 0.9436505967114382 1.0 20.787306610690997 ALENDFFNS(ph)PPRK ddPTM_KYSE-520_SHP099_60min_R1 6 ALENDFFNSPPRK 13 1 F5H148;H3BMT1;Q9NYV6-2;Q9NYV6-3;Q9NYV6;A6NIE6 F5H148 RRN3;RRN3P2 RNA polymerase I-specific transcription initiation factor RRN3;Putative RRN3-like protein RRN3P2 1 ALENDFFNS(1)PPRK;ALENDFFNS(1)PPRK;ALENDFFNS(1)PPRK;ALENDFFNS(1)PPRK;ALENDFFNS(1)PPRK;ALENDFFNS(1)PPRK 188.27 1.7706e-08 9513620000.0 2787490.0 2819960.0 2563140.0 2386990.0 2718330.0 2674920.0 2549880.0 2674340.0 3038600.0 2755870.0 True False 2632862.3729764507 2684484.888753747 2728364.1055690027 2613848.8119252897 2932247.1058180113 2658224.8320688037 2807646.75483064 2665063.338735649 2486866.836872523 2731455.1358344164 0.963904674265189 0.9828039470740491 0.9988683576658969 0.9569437101981908 1.0735109895635375 0.9731900030848422 1.02789414989712 0.9756936161140769 0.9104549455149021 1.0 21.381238296280728 -9.742285003629608 5.661470170890587 1.0000000009387737 0.9876087633449446 0.008020366797998446 0.04117861322727711 4.812607212530466e-10 1.0351946789981152e-10 0.0393306493180735 0.009539082904726666 1.8101517994915372e-10 9.742285003629608 -0.012391237593829096 ALES(ph)PERPFLAILGGAK ddPTM_KYSE-520_SHP099_60min_R1 9 ALESPERPFLAILGGAK 17 1 P00558-2;P00558 P00558-2 PGK1 Phosphoglycerate kinase 1 1 ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK;ALES(1)PERPFLAILGGAK 232.11 3.2417e-20 15300790000.0 4397876.0 4376598.0 3698341.0 3096376.0 3364810.0 4128447.0 3274812.0 3843081.0 4863468.0 3852736.0 True False 4153917.0513315448 4166339.6626724764 3936741.978414825 3390654.644080607 3629601.403849975 4102679.830903344 3605861.9560451633 3829750.248992846 3980384.8092512153 3818603.756423249 1.0878104449418895 1.0910636265059717 1.0309375440677386 0.887930474162764 0.9505048534414302 1.074392655693132 0.9442880660188337 1.0029189969110692 1.0423665462947904 1.0 21.86461379347374 -4.943673531323589 4.748434338434313 0.9847743632083176 1.0866992585588657 0.410105522555716 0.04927006207363305 0.19779575893752493 9.271153464815049 0.013616444994948627 0.02930055506212348 1.1384827866859898e-05 4.943673531323589 0.10192489535054816 ALESLMTEFFHDCTTNER ddPTM_KYSE-520_SHP099_60min_R1 2 ALESLMTEFFHDCTTNER 18 0 Q96QU8 Q96QU8 XPO6 Exportin-6 0 ; 98.06200000000001 0.0014478 42313000.0 32098.0 30885.0 31411.0 47003.0 26055.0 24394.0 27831.0 29244.0 37958.0 27761.0 False True 30317.45995422334 29401.238240669856 33435.803319376966 51470.15098803274 28105.380267328972 24241.747997505157 30644.429084384967 29142.559389600923 31065.784043311774 27515.05913773118 1.1018497108243264 1.0685507922587807 1.215181953707914 1.870617494601425 1.0214544743168765 0.8810356494659553 1.1137329900324475 1.0591494368128749 1.1290466027278683 1.0 14.747933808984298 ALEYSNGIFDCQS(ph)PT(ph)SPFMGSLR ddPTM_KYSE-520_SHP099_60min_R1 1 ALEYSNGIFDCQSPTSPFMGSLR 23 0 Q86W92-4;Q86W92;A0A0A0MTP2;F5H6Q7;F5H0E0;F5H495;Q86W92-5;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 2 ALEYSNGIFDCQS(0.965)PT(0.594)S(0.44)PFMGSLR 78.921 0.012304 40889000.0 48856.0 59666.0 57625.0 76009.0 62755.0 52408.0 59402.0 83914.0 87761.0 60325.0 True False 46145.8602879786 56799.5557995081 61339.59970325997 83232.87250706076 67693.46147289299 52080.90223223946 65406.93386765252 83622.92191967482 71825.81467477448 59790.56743213981 0.7717916432278807 0.9499751923909001 1.0259076362317225 1.3920736343826665 1.132176267598107 0.8710554936838398 1.093933987863338 1.3985972288117836 1.2012900656327479 1.0 15.86763028216274 -4.65489134609661 2.0928525489989847 1.1572305920709844 0.7872045033510144 0.37954012650123004 0.1538057886521921 0.4085495402386301 3.2248646887321812 0.04558353182325971 0.21159417142260414 2.2136484616591356e-05 4.65489134609661 -0.37002608871997 ALEYSNGIFDCQS(ph)PTS(ph)PFMGSLR ddPTM_KYSE-520_SHP099_60min_R1 3 ALEYSNGIFDCQSPTSPFMGSLR 23 0 Q86W92-4;Q86W92;A0A0A0MTP2;F5H6Q7;F5H0E0;F5H495;Q86W92-5;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 2 ALEYSNGIFDCQS(0.963)PT(0.297)S(0.74)PFMGSLR;ALEYSNGIFDCQS(0.85)PT(0.3)S(0.85)PFMGSLR;ALEYSNGIFDCQS(0.941)PT(0.234)S(0.825)PFMGSLR 101.6 0.0010151 138327000.0 139964.0 171314.0 156757.0 209021.0 184138.0 181360.0 215179.0 262713.0 309528.0 242712.0 True False 132199.91790868345 163083.8182924437 166861.80704006794 228886.2929955449 198628.61299809715 180228.064967924 236931.39326466448 261801.70992067497 253325.51776590483 240561.76050707887 0.5495466845188526 0.6779291020679271 0.6936339619744253 0.9514658211391399 0.8256865620679236 0.7491966494925137 0.9849087933395484 1.0882931242639085 1.0530581304024436 1.0 17.876047805598787 -4.036357432362658 0.3038741248518432 1.0713518560882527 0.07735079749498469 0.7699056529980013 0.08357365910999878 4.496354945342549 0.3051734281405887 0.10200082814583263 1.7068905077491652 9.196923364437742e-05 4.036357432362658 -0.9940010585932679 ALEYSNGIFDCQS(ph)PTSPFMGSLR ddPTM_KYSE-520_SHP099_60min_R1 1 ALEYSNGIFDCQSPTSPFMGSLR 23 0 Q86W92-4;Q86W92;A0A0A0MTP2;F5H6Q7;F5H0E0;F5H495;Q86W92-5;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 ALEYSNGIFDCQS(0.954)PT(0.037)S(0.009)PFMGSLR 103.84 0.00077806 72528000.0 72457.0 93055.0 73654.0 132920.0 72148.0 84047.0 71451.0 72115.0 97022.0 73424.0 True False 68437.6657705515 88584.49812159727 78401.85469056664 145552.67683614476 77825.63713403382 83522.4314973483 78673.96437456035 71864.84989676757 79405.25052558599 72773.52048300757 0.94041988509449 1.217262783683545 1.0773404140709846 2.0000774439671494 1.069422457749669 1.1477036007465184 1.081079544488033 0.9875137195478654 1.091128338969487 1.0 16.151125983584535 ALEYSNGIFDCQSPTS(ph)PFMGSLR ddPTM_KYSE-520_SHP099_60min_R1 1 ALEYSNGIFDCQSPTSPFMGSLR 23 0 Q86W92-4;Q86W92;A0A0A0MTP2;F5H6Q7;F5H0E0;F5H495;Q86W92-5;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 ALEYSNGIFDCQS(0.001)PT(0.169)S(0.83)PFMGSLR 120.64 9.7261e-05 23379000.0 16762.0 25507.0 17177.0 19623.0 18101.0 26681.0 20215.0 21890.0 37447.0 25704.0 True False 15832.178445781416 24281.605433212455 18284.256904171732 21487.964020129923 19525.445719398256 26514.473982185576 22258.529479387824 21814.0686991644 30647.568762050076 25476.28255740941 0.6214477489054562 0.9531063010663029 0.7176972096682144 0.8434497447462349 0.7664165945482325 1.0407512918117727 0.8736961300860691 0.8562500690596279 1.2029843323093727 1.0 14.636867157643676 -6.576341334147855 0.5585127661015995 1.0508291488427837 0.7570440515498591 0.43019447573080993 0.1210976488813038 0.9069982477502946 0.5973637817657186 0.10591251222639529 0.09660640353539156 2.6525199919755124e-07 6.576341334147855 -0.29378509729292457 ALFEEVPELLTEAEKK ddPTM_KYSE-520_SHP099_60min_R1 3 ALFEEVPELLTEAEKK 16 1 P31939-2;P31939;H7C1S2 P31939-2 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase 0 ;; 157.91 1.7524000000000002e-06 78613000.0 103279.0 102947.0 91376.0 65666.0 108749.0 98449.0 91831.0 93987.0 122137.0 81980.0 False True 97549.9079884177 98001.27159340272 97266.2431667694 71906.87689679714 117306.92760283087 97834.54327319769 101114.17366419293 93660.98103373073 99959.99962321436 81253.72097947497 1.2005592705478587 1.20611426051686 1.1970681710852267 0.8849671871022513 1.4437114533187114 1.2040623136251336 1.2444251468770864 1.1526977460809442 1.2302205784331364 1.0 16.310146261694406 -10.117858330364621 4.14653540918274 0.9999644505637186 1.1948389592993263 0.1743041536548272 0.1279431351853984 42444011.48499833 1.5137700111729562 17359.842818209156 0.030321695258082045 7.623276456196442e-11 10.117858330364621 0.19487450873560763 ALFHQFS(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 2 ALFHQFSLK 9 0 C9JBS6;A8MQ07;A0A590UJR0;Q92565-2;Q92565 C9JBS6 RAPGEF5 Rap guanine nucleotide exchange factor 5 1 ALFHQFS(1)LK;ALFHQFS(1)LK 154.66 0.00039898 433780000.0 1380440.0 1264240.0 1207850.0 1164360.0 1303480.0 1227800.0 1203830.0 1275630.0 1461450.0 1290610.0 True False 1303864.2413610828 1203504.0127370732 1285709.9436283286 1275020.4243224 1406056.4602133178 1220136.8447707144 1325524.884648599 1271205.1372642794 1196087.5201564375 1279176.1994793871 1.0192999540577314 0.9408430310280071 1.0051077749504724 0.9967512097561865 1.099189041185702 0.9538457995601378 1.0362332297834147 0.9937685971499846 0.9350451647265123 1.0 20.286783570531092 ALFKPPEDS(ph)QDDES(ph)DS(ph)DAEEEQTTKR ddPTM_KYSE-520_SHP099_60min_R1 1 ALFKPPEDSQDDESDSDAEEEQTTKR 26 2 H7C072;Q13769 H7C072 THOC5 THO complex subunit 5 homolog 3 ALFKPPEDS(1)QDDES(1)DS(0.998)DAEEEQT(0.001)T(0.001)KR 90.323 0.0031873 316210000.0 591910.0 574760.0 510030.0 479240.0 474910.0 476090.0 461190.0 409150.0 647490.0 468060.0 True False 559075.5723566691 547147.666867651 542907.3498768534 524786.8255112395 512282.71513172926 473118.545713381 507811.58598065114 407730.75414632773 529922.1378946186 463913.35254517 1.2051292968598775 1.1794178026259263 1.1702774815561963 1.1312173332198763 1.1042637861600453 1.0198424837692395 1.0946259321803136 0.8788941984734705 1.1422868839349078 1.0 18.82349584546498 -5.840611864249806 0.9045530905519864 1.0126856874226733 1.1977760510720477 0.538331146686539 0.0644138686906379 0.4282325242221778 0.7630577737497357 0.031024115298727117 0.04562609854730252 1.4434047686008936e-06 5.840611864249806 0.18509036364937437 ALFKPPEDSQDDES(ph)DS(ph)DAEEEQTTKR ddPTM_KYSE-520_SHP099_60min_R1 3 ALFKPPEDSQDDESDSDAEEEQTTKR 26 2 H7C072;Q13769 H7C072 THOC5 THO complex subunit 5 homolog 2 ALFKPPEDSQDDES(1)DS(1)DAEEEQTTKR;ALFKPPEDS(0.048)QDDES(0.952)DS(1)DAEEEQTTKR;ALFKPPEDSQDDES(1)DS(0.991)DAEEEQT(0.005)T(0.004)KR 140.94 1.4463999999999998e-06 2167130000.0 1281270.0 1219910.0 1130340.0 1036230.0 1106210.0 1088830.0 948430.0 1120280.0 1476140.0 1074260.0 True False 1210195.398951577 1161303.69247776 1203203.5250079448 1134712.9876460899 1193262.4335260778 1082034.2080890196 1044306.5601848019 1116394.010155318 1208110.1864612007 1064742.8921616324 1.136608103102382 1.0906893119709777 1.130041377937927 1.0657154849302677 1.1207047657331866 1.0162398979647402 0.9808063222330221 1.0485104135222956 1.134649684308768 1.0 20.022073668334386 -6.258876944767732 24.977765125617804 1.0356209796958138 1.1065401852017944 0.420271034384897 0.04265779863941699 248.85667809748642 2425790.9990676553 0.014828151883381404 0.014191452013138482 5.509637872038867e-07 6.258876944767732 0.07091920550598063 ALGRS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 ALGRSLR 7 1 A0A0B4J2C9 A0A0B4J2C9 PDXK 1 ALGRS(1)LR 82.426 0.033488 2006900000.0 5314600.0 4077800.0 3685800.0 2852100.0 3597300.0 3649800.0 3541000.0 3273300.0 3950500.0 3729600.0 True False 5019788.543607565 3881896.367097413 3923392.5654885145 3123162.72648487 3880387.044162826 3627020.244375428 3898958.836829694 3261945.6862939615 3233188.78400082 3696558.6455848916 1.3579626417135615 1.0501379091425713 1.0613635388077907 0.8448838571018273 1.0497296042624662 0.9811883408660326 1.0547536805581446 0.8824276845140752 0.8746483131986793 1.0 21.817751371075854 -3.676124252617125 1.1609916914477882 0.9607210155052844 2.305820895240817 0.7241454454284106 0.07265708250189906 2.819991527227675 1.2295370009331381 0.022058760152897136 6.40109773644102 0.00021080249530221968 3.676124252617125 1.3450998797355322 ALGS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 9 ALGSPTK 7 0 Q9NR45;Q5TBR0;Q5TBR1 Q9NR45 NANS Sialic acid synthase 1 ALGS(0.953)PT(0.047)K;ALGS(1)PTK;ALGS(1)PTK;ALGS(1)PTK;ALGS(0.982)PT(0.018)K;ALGS(0.999)PT(0.001)K;ALGS(0.998)PT(0.002)K;ALGS(1)PTK;ALGS(0.998)PT(0.002)K 133.13 0.0019108 41056750000.0 53616500.0 47129830.0 40149780.0 36489820.0 38675840.0 44014310.0 40579200.0 42954030.0 51422940.0 46205270.0 True False 50642285.86315705 44865642.22348287 42737899.06071938 39957801.521735616 41719408.57257232 43739600.36501067 44681341.550827354 42805032.495476015 42085830.36282681 45795927.25495607 1.105825100586352 0.9796862933619819 0.9332248875055642 0.8725186696031219 0.910985126260489 0.9550980400834037 0.9756619033408022 0.9346908133810878 0.9189863135323295 1.0 25.44871596580141 -4.293605927286083 2.4411880117884155 0.9342665312509952 1.1377239626572204 0.6964786102411618 0.03332958534117443 0.27838578368460715 2.167248041180698 0.009151468366899508 0.11525492932912805 5.086207485621068e-05 4.293605927286083 0.2034574314062252 ALGVISNFQSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 ALGVISNFQSSPK 13 0 Q6N039;E9PC87;O94876-2;O94876 Q6N039 DKFZp686H13261;TMCC1 Transmembrane and coiled-coil domains protein 1 1 ALGVISNFQS(0.004)S(0.996)PK;ALGVISNFQS(0.325)S(0.675)PK 194.23 1.8863e-08 1749640000.0 3349600.0 4188900.0 2846300.0 3310800.0 3215900.0 3806000.0 3048300.0 4510300.0 5220200.0 3204100.0 True False 3163791.010737947 3987658.956332914 3029777.0522410222 3625457.4365716856 3468973.0340319793 3782245.3422359885 3356451.912541074 4494654.82201193 4272343.270533126 3175714.1667520767 0.9962455197829332 1.2556731327023818 0.9540458911450743 1.1416195684511425 1.0923442261744323 1.1909904807661686 1.056912472690779 1.415320959634344 1.3453173195692902 1.0 21.5986496364755 -7.244205627156499 24.97491674321585 1.2852393683040026 1.1037756559713736 0.2177604902512642 0.13050367642015626 942.6199087912905 1366034.5681299455 0.05762975100449694 0.0331629285912985 5.698943782066446e-08 7.244205627156499 -0.18146371233262903 ALHHGIDLEK ddPTM_KYSE-520_SHP099_60min_R1 1 ALHHGIDLEK 10 0 P14868;P14868-2;H7BZ35 P14868 DARS Aspartate--tRNA ligase, cytoplasmic 0 143.89 4.9238999999999994e-05 0.0 282340.0 248010.0 173820.0 153810.0 251500.0 254220.0 182130.0 220820.0 205780.0 205070.0 False True 266678.03736916353 236095.2273294003 185024.71532183344 168428.05615533725 271291.61916074617 252633.3186818789 200541.47781750682 220054.02695977545 168415.53929165643 203253.2393420456 1.3120481534878923 1.1615816214967498 0.9103161943237903 0.8286611160567895 1.334746841127594 1.2429485478297044 0.9866582125169712 1.0826593842839405 0.8285995334531304 1.0 17.632918819826727 -7.443027441405565 2.0482653066822007 0.9263559550231886 1.1117995454098122 0.17118488717787872 0.1631068267157059 0.6941214651472974 5.311646797944299 0.14267625784288737 0.04964198071033999 3.605558601574951e-08 7.443027441405565 0.1854435903866236 ALHSNQANAELT(ph)DDEHENESK ddPTM_KYSE-520_SHP099_60min_R1 1 ALHSNQANAELTDDEHENESK 21 0 Q5TB80-2;Q5TB80 Q5TB80-2 CEP162 Centrosomal protein of 162 kDa 1 ALHSNQANAELT(1)DDEHENESK 115.79 0.00015722 261090000.0 55357.0 51109.0 49679.0 65731.0 52205.0 40865.0 46362.0 52925.0 60508.0 63110.0 True False 52286.23685855635 48653.64692382696 52881.387829210405 71978.05447725418 56313.23649418188 40609.946376897904 51048.72340951659 52741.41552778785 49521.27248255204 62550.894498837006 0.8358991070787725 0.7778249585980191 0.8454137747013932 1.1507118332031598 0.9002786761942932 0.6492304658833129 0.8161150023276762 0.8431760400927354 0.7916956724491411 1.0 15.93274289511255 -4.993582365405657 24.345729742006085 0.8714826347107083 0.8080513164685696 0.04822747798778726 0.12515303693683238 495.4492906724107 1879460.4793295022 0.03556260060623658 0.07371372973435253 1.0148868716192159e-05 4.993582365405657 -0.06343131824213866 ALHVNNDR ddPTM_KYSE-520_SHP099_60min_R1 4 ALHVNNDR 8 0 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 ;;; 126.41 0.0014588 1110570000.0 1292020.0 1312400.0 897890.0 848870.0 1173730.0 1289060.0 985190.0 1109790.0 1041120.0 968550.0 False True 1220349.0750219838 1249350.3340474397 955769.4260747948 929546.3495779276 1266095.873389831 1281014.4983874715 1084782.619727829 1105940.3975169326 852078.8524994135 959969.4005204985 1.2712374731531095 1.3014480809180355 0.9956248871647092 0.9683083117794428 1.3188919070788607 1.334432636803737 1.130017914258159 1.1520579686365922 0.8876104301214327 1.0 19.872628894415495 -7.686778606774653 5.663270321213177 0.9452105318515753 1.1840620199268417 0.37608503751658673 0.12408954080265368 0.2215837560724195 11.981371996114346 0.09781432898952262 0.0346416886838362 2.056938908370661e-08 7.686778606774653 0.23885148807526635 ALIAQLPS(ph)PAIDHEQLR ddPTM_KYSE-520_SHP099_60min_R1 1 ALIAQLPSPAIDHEQLR 17 0 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 ALIAQLPS(1)PAIDHEQLR 160.33 3.1803e-08 530200000.0 176440.0 202600.0 136360.0 122500.0 124330.0 212190.0 131000.0 153790.0 176780.0 182950.0 True False 166652.52147558003 192866.79189120032 145149.98378371415 134142.36316903206 134114.06365906764 210865.64350211574 144242.7584367948 153256.53838485587 144681.20826114804 181329.2053329461 0.9190605626356901 1.0636278449302725 0.8004776920364165 0.7397725199464019 0.7396164529195131 1.162888477423902 0.7954744971828707 0.8451839741064059 0.7978924740528855 1.0 17.468251782286075 -4.766096973677761 24.998559563954448 0.8545305048218612 0.9913442081893115 0.14353572791214741 0.1275833364955855 198.60819385043547 1066006.6686294412 0.03374932251343394 0.07412928189245722 1.713574640457489e-05 4.766096973677761 0.13681370336745025 ALIEVLQPLIAEHQAR ddPTM_KYSE-520_SHP099_60min_R1 1 ALIEVLQPLIAEHQAR 16 0 P23381-2;P23381 P23381-2 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS 0 124.43 0.00018109999999999998 62566000.0 91442.0 101420.0 91268.0 75204.0 97473.0 102840.0 58763.0 65340.0 79576.0 55827.0 False True 86369.52997489236 96547.63096547646 97151.2813139632 82351.3655490929 105143.57055449468 102198.1374134389 64703.337511613485 65113.350790470606 65127.0043477154 55332.4162127488 1.5609209914638156 1.7448656244155034 1.7557751488824227 1.48830235846666 1.900216505099396 1.8469849033972252 1.1693568063761073 1.176766807726503 1.1770135628508824 1.0 15.75583730318633 -6.771007818059281 24.98894064275838 1.1455146535785146 1.7172889173031387 0.8429013107354904 0.12374282654681124 78.40734833068662 204766.61551420286 0.05218935480308591 0.035696053092112746 1.69430729968186e-07 6.771007818059281 0.5717742637246241 ALIQTCLNSPDS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 5 ALIQTCLNSPDSPPR 15 0 P11831 P11831 SRF Serum response factor 1 ALIQTCLNSPDS(1)PPR;ALIQTCLNSPDS(1)PPR;ALIQTCLNSPDS(1)PPR;ALIQTCLNSPDS(1)PPR;ALIQTCLNS(0.001)PDS(0.999)PPR 377.81 1.7181999999999995e-68 3706570000.0 1901100.0 2184310.0 1492920.0 1686810.0 1695340.0 1984820.0 1679300.0 2156080.0 2092310.0 2140660.0 True False 1795642.1932511046 2079372.4688838492 1589156.0119564584 1847123.9152420827 1828753.6128349074 1972432.002148402 1849060.0323886208 2148601.061712858 1712399.2468428693 2121695.417808276 0.8463242076028111 0.9800522975309308 0.7490028958058768 0.8705886338530968 0.861930321141015 0.9296489899506574 0.871501166882243 1.012681199986931 0.8070900434011343 1.0 21.016786132854573 -6.256624023692036 22.901810952272186 0.9216841630583069 0.8624077074422499 0.14590525892384343 0.07560036442275328 272.3750352570785 1295413.926771445 0.024255879729659688 0.023466422065852408 5.538293614754256e-07 6.256624023692036 -0.05927645561605699 ALIQTCLNSPDS(ph)PPRSDPTTDQR ddPTM_KYSE-520_SHP099_60min_R1 7 ALIQTCLNSPDSPPRSDPTTDQR 23 1 P11831 P11831 SRF Serum response factor 1 ALIQT(0.051)CLNS(0.035)PDS(0.828)PPRS(0.075)DPT(0.006)T(0.006)DQR;ALIQTCLNSPDS(1)PPRSDPTTDQR;ALIQTCLNS(0.001)PDS(0.997)PPRS(0.001)DPTTDQR;ALIQTCLNS(0.001)PDS(0.992)PPRS(0.006)DPTTDQR;ALIQTCLNS(0.009)PDS(0.965)PPRS(0.025)DPT(0.001)T(0.001)DQR;ALIQTCLNSPDS(1)PPRSDPTTDQR;ALIQTCLNSPDS(0.999)PPRS(0.001)DPTTDQR 208.88 6.543e-21 8873550000.0 2369660.0 2934590.0 2250410.0 1707734.0 1855750.0 2418520.0 1877022.0 2170410.0 3055490.0 2616730.0 True False 2238210.2359999027 2793607.8914906043 2395475.029383312 1870036.5259110513 2001786.9672268555 2403425.1195755554 2066769.7017293822 2162881.3542875033 2500690.0386347724 2593547.8079851368 0.8629917016022592 1.0771376116104407 0.9236286379638003 0.7210341448703953 0.7718334557256511 0.9266939719313356 0.7968889932802143 0.8339469770436938 0.9641966232261192 1.0 21.306495533090445 -2.0837926109337923 13.792750018779381 0.8801727604066765 0.9696474248709757 0.0 0.10521267389761962 0.0 0.0 0.025221517077092945 0.0 0.008245317604698422 2.0837926109337923 0.08947466446429919 ALIVLAHSER ddPTM_KYSE-520_SHP099_60min_R1 2 ALIVLAHSER 10 0 B4DLR8;P15559-3;P15559-2;P15559;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 163.94 0.00011092 928170000.0 762050.0 728120.0 509690.0 400090.0 551960.0 615740.0 393620.0 498070.0 465940.0 496820.0 False True 719777.5673909873 693140.0222695982 542545.4329328336 438114.4333085556 595396.1117771976 611896.9382628445 433410.9509610007 496342.31142041204 381337.04139155627 492418.56132011174 1.461719000724414 1.4076236696102147 1.1017972829422555 0.8897195754238556 1.2091260536179143 1.2426358109296822 0.8801677779957784 1.0079683229035503 0.7744164646621768 1.0 18.909525618508933 -1.0000000094939236 0.372288104800641 0.9434822239005457 8.70791180786531 0.5904878328905897 0.13942378563793525 48.56775616224559 0.6703313004021503 0.11592783284413215 270.179560593447 0.09999999781394332 1.0000000094939236 7.764429583964764 ALKDEEK ddPTM_KYSE-520_SHP099_60min_R1 3 ALKDEEK 7 1 J3KN67;A0A2R2Y2Q3;P06753;P06753-7;A0A494C0P6;P06753-5;P06753-2;A0A087WWU8;P06753-6;P06753-4;P06753-3 J3KN67;P06753-5;P06753-4 TPM3 Tropomyosin alpha-3 chain 0 ;; 83.005 0.012292 3139250000.0 4002950.0 3932480.0 1842270.0 1974690.0 4595410.0 5472000.0 2952170.0 3174590.0 3201030.0 7221550.0 False True 3780898.383817007 3743557.758027181 1961025.6719362198 2162363.9438878004 4957042.622693767 5437847.218264666 3250604.154002691 3163578.088244878 2619803.6433996106 7157572.685280876 0.5282375115228938 0.5230205717261643 0.27397914882079405 0.3021085553674605 0.6925591734314667 0.7597334260324421 0.45414895481080697 0.4419903544606105 0.3660184476766937 1.0 22.771038985217587 -5.761616368052127 24.999999752186767 0.5899611878201589 0.405645509216445 0.22500169512084867 0.18837016382363458 8.768342975757715 1238617.4441988799 0.058742587577266865 0.07093477647244785 1.7313450592859887e-06 5.761616368052127 -0.18431567860371395 ALKEPPRDR ddPTM_KYSE-520_SHP099_60min_R1 2 ALKEPPRDR 9 2 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 0 ; 100.48 0.0016155999999999998 1164160000.0 3506100.0 3656000.0 2884500.0 1992870.0 3281100.0 2972600.0 1998950.0 2449100.0 3348200.0 2387300.0 False True 3311609.643762932 3480360.2722321176 3070439.485363178 2182271.7656217883 3539303.90309473 2954046.9007700155 2201023.3738719895 2440604.643724239 2740251.281253398 2366150.379291293 1.399576997618732 1.4708956382030762 1.2976518788644502 0.922287858253295 1.4958068320893527 1.2484611826129193 0.9302128018301346 1.031466412737151 1.1581052942519043 1.0 21.174110335547752 -1.9113023140128886 0.21345114923177927 0.9775064788988739 2.7689500776307536 0.39303905098252145 0.16201468151738535 37.361863608490545 0.6572850486059864 0.28670403374012343 21.083532448513203 0.012265851034348536 1.9113023140128886 1.7914435987318797 ALKS(ph)LSK ddPTM_KYSE-520_SHP099_60min_R1 1 ALKSLSK 7 1 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 1 ALKS(0.998)LS(0.002)K 71.34899999999999 0.041475 4504400000.0 1546200.0 1326500.0 1357700.0 1453600.0 1263800.0 1055300.0 1276900.0 1398200.0 1656800.0 1189400.0 True False 1460429.203726718 1262772.9488829072 1445219.514396806 1591749.7069592231 1363253.8699616338 1048713.4812563397 1405981.5133430762 1393349.9705423324 1355966.8845291904 1178862.8413391963 1.2388457354951152 1.07117885525036 1.225943734688445 1.3502416491056624 1.1564143190847953 0.8895975379671769 1.1926591152418304 1.1819440919517636 1.1502329507551554 1.0 20.16896444232319 -6.001118383175333 24.996914327172675 1.0924397852347538 1.216400533596249 0.2764746478415966 0.10520585345761284 66.44737837159737 1485216.7599736424 0.03442315872639047 0.03854008522377645 9.974281404843554e-07 6.001118383175333 0.12396074836149507 ALLDSS(ph)ENCDR ddPTM_KYSE-520_SHP099_60min_R1 1 ALLDSSENCDR 11 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ALLDSS(1)ENCDR 50.46 0.049867 1027000000.0 0.0 0.0 0.0 0.0 0.0 21448.0 0.0 0.0 24717.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 21314.135076268354 0.0 0.0 20229.015864864785 0.0 0.0 ALLETAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 ALLETASPR 9 0 H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2;Q96BT3 H3BMP6 CENPT Centromere protein T 1 ALLETAS(1)PR;ALLETAS(1)PR;ALLET(0.009)AS(0.991)PR;ALLETAS(1)PR 198.29 2.6635000000000004e-06 2229910000.0 2872290.0 2970790.0 2654150.0 2245880.0 2879270.0 3040910.0 2387080.0 2770320.0 2987340.0 2794620.0 True False 2712958.347931841 2828068.7891533 2825240.7557901507 2459327.7599515575 3105852.168194679 3021930.55272171 2628389.342055753 2760710.4065175513 2444914.36071308 2769861.8409814583 0.9794561980645741 1.0210143868227077 1.0199933852256942 0.8878882417760346 1.1213021971861845 1.0910040739255553 0.9489243481994117 0.996696068255641 0.8826845890070683 1.0 21.401382586644907 -6.863888809645517 21.91845711629228 0.956792923691508 1.0188654389847653 0.17988702450044547 0.0658979266334123 9.43725046057466 1995.40435975994 0.02837612044396227 0.019131197561347967 1.3680790435444773e-07 6.863888809645517 0.0620725152932573 ALLFIPR ddPTM_KYSE-520_SHP099_60min_R1 3 ALLFIPR 7 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;; 143.22 0.011848000000000001 1400181000.0 770915.0 919775.0 692343.0 424484.0 689593.0 797651.0 549869.0 601711.0 677349.0 624042.0 False True 728150.8081690471 875587.6283895778 736972.5375679669 464826.8317342314 743860.0458525497 792672.5642353856 605455.1247242889 599623.8049814038 554359.4961787551 618513.4733773296 1.177259412301973 1.415632263608618 1.1915222049146377 0.7515225645709736 1.2026577881816833 1.2815768748044858 0.9788875275719752 0.96945956845082 0.8962771548883676 1.0 19.238445496902713 -3.606264802589321 0.3064346059185059 0.9577307080482215 1.7306639925385274 0.2548908091225096 0.1638479856116621 16.78189779146214 0.939911249348067 0.1892866634225799 5.212951580930964 0.000247591195827996 3.606264802589321 0.772933284490306 ALLFVPR ddPTM_KYSE-520_SHP099_60min_R1 2 ALLFVPR 7 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 154.91 0.0089988 1816620000.0 1883020.0 2002340.0 1572970.0 1347090.0 1758730.0 1911920.0 1583760.0 1711990.0 1884360.0 1648350.0 False True 1778565.1268926912 1906144.5808263854 1674366.163040985 1475117.0285826218 1897132.0451951418 1899986.998089286 1743861.9168080762 1706051.506271471 1542207.7248499652 1633746.9013968953 1.0886417751562207 1.1667318721134732 1.0248626403571808 0.9029042548275741 1.1612153899560853 1.1629628778268828 1.0674002902879447 1.04425691936294 0.9439697933207024 1.0 20.63975306909786 -7.566804994194974 3.5295482834912195 0.9728428081228926 1.0815868561181081 0.24672409052194433 0.0757625282296543 0.37011869901174965 9.378048043363215 0.06248096679403664 0.021551005597481743 2.7114088285035115e-08 7.566804994194974 0.10874404799521553 ALLLLCGEDD ddPTM_KYSE-520_SHP099_60min_R1 12 ALLLLCGEDD 10 0 P08758;D6RBE9;D6RBL5 P08758 ANXA5 Annexin A5;Annexin 0 ;;;;;;;;;;; 231.74 1.0336e-09 1665351000.0 1126475.0 1305354.0 4957510.0 609453.0 1738510.0 1264858.0 1051645.0 891226.0 2950250.0 1714248.0 False True 1063987.18617776 1242642.8344636995 5277079.026896452 667375.229881274 1875320.8462312075 1256963.5520467493 1157955.5396661288 888134.5450197118 2414558.9697502665 1699061.0963847637 0.626220674725409 0.7313703062872642 3.1058794990509404 0.3927906014099816 1.1037395007286592 0.7397989128944787 0.6815267220996402 0.5227207820304232 1.4211136814843965 1.0 20.696306300519954 ALLPLELQDDGS(ph)DSRK ddPTM_KYSE-520_SHP099_60min_R1 10 ALLPLELQDDGSDSRK 16 1 A0A1W2PPT2;Q15906;Q15906-2 A0A1W2PPT2 VPS72 Vacuolar protein sorting-associated protein 72 homolog 1 ALLPLELQDDGS(0.762)DS(0.238)RK;ALLPLELQDDGS(0.944)DS(0.056)RK;ALLPLELQDDGS(0.999)DS(0.001)RK;ALLPLELQDDGS(1)DSRK;ALLPLELQDDGS(0.999)DS(0.001)RK;ALLPLELQDDGS(1)DSRK;ALLPLELQDDGS(0.999)DS(0.001)RK;ALLPLELQDDGS(1)DSRK;ALLPLELQDDGS(1)DSRK;ALLPLELQDDGS(0.889)DS(0.111)RK 229.46 7.754699999999999e-19 2711102000.0 1652855.0 1469406.0 1362902.0 1315662.0 1427750.0 1328490.0 1274238.0 1412664.0 1755939.0 1296523.0 True False 1561167.8382652455 1398813.530136629 1450756.8436403025 1440702.120911797 1540105.8022137375 1320198.4011316558 1403050.4124044615 1407763.7983022577 1437104.741220003 1285036.814899632 1.214881799621578 1.0885396542089603 1.12896130820471 1.121136845425182 1.1984915796626634 1.0273623182031326 1.091836744392453 1.0955046438978568 1.118337408358412 1.0 20.293378260970808 -6.265202386310799 24.99981507967326 1.0741540473017765 1.144148408961381 0.4345330340056627 0.047135861493566515 380.28481044931635 2526434.9988520113 0.01591227729475973 0.014583030933318968 5.429972294595299e-07 6.265202386310799 0.06999436165960438 ALLPLELQDDGSDS(ph)RK ddPTM_KYSE-520_SHP099_60min_R1 1 ALLPLELQDDGSDSRK 16 1 A0A1W2PPT2;Q15906;Q15906-2 A0A1W2PPT2 VPS72 Vacuolar protein sorting-associated protein 72 homolog 1 ALLPLELQDDGS(0.003)DS(0.997)RK 92.939 0.0019906 80821000.0 239830.0 202420.0 202640.0 189170.0 233290.0 220540.0 196060.0 205280.0 260140.0 201300.0 True False 226526.15181074807 192695.43936138574 215702.49863546362 207148.65992396564 251648.59576147303 219163.52805484057 215879.6581612057 204567.93159271224 212905.13359574086 199516.63860902993 1.13537474062324 0.9658113764586275 1.0811253644772518 1.0382525556171347 1.2612912763361064 1.0984724360974747 1.0820133080942713 1.0253176527977736 1.0671046539278704 1.0 17.606149538868326 -7.157095765117042 4.086462258743097 1.0346274494727454 1.0945725578317453 0.14276647194609393 0.07196399978574164 0.5541762018544532 16.04001853386412 0.03822126880546056 0.0209641926997886 6.964729197924466e-08 7.157095765117042 0.05994510835899991 ALLQSS(ph)ASR ddPTM_KYSE-520_SHP099_60min_R1 3 ALLQSSASR 9 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 ALLQS(0.001)S(0.999)ASR;ALLQS(0.105)S(0.888)AS(0.007)R;ALLQS(0.029)S(0.971)ASR 184.36 6.5846000000000005e-06 1075800000.0 2273050.0 2172420.0 2256830.0 1879530.0 2076420.0 2067260.0 2016610.0 2018880.0 2477810.0 2233730.0 True False 2146959.3852871624 2068053.6823310994 2402308.872855671 2058159.9660986988 2239822.440786307 2054357.463528841 2220468.619016981 2011876.976490136 2027902.1645070424 2213940.8900156445 0.9697455767538542 0.9341051929875535 1.0850826612803992 0.929636367158906 1.0116902627741249 0.9279188404683759 1.0029484658017633 0.9087311163379431 0.9159694252237749 1.0 21.078185273458228 -6.616073558088067 1.243943965913746 0.94224243689411 0.9852131767947302 0.07259283747516476 0.05123893632320882 1.0898833554809826 3.4344213916671795 0.02972638492850897 0.019512130573698 2.4206190226752355e-07 6.616073558088067 0.04297073990062017 ALLSLRS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 ALLSLRSPK 9 1 Q5H909;Q9UNF1-2;Q9UNF1 Q5H909 MAGED2 Melanoma-associated antigen D2 1 ALLSLRS(1)PK;ALLS(0.055)LRS(0.945)PK;ALLSLRS(1)PK;ALLS(0.014)LRS(0.986)PK 168.58 0.0001472 15306700000.0 7858300.0 6967780.0 6793130.0 5575790.0 6633450.0 6199030.0 5296940.0 6031850.0 7936430.0 5889600.0 True False 7422384.43386732 6633037.389949001 7231026.029192308 6105711.405177608 7155464.775832401 6160339.55435658 5832406.388352628 6010926.920194369 6495374.37311926 5837422.72603946 1.2715173771393486 1.1362955367889462 1.238736060168521 1.0459601251664319 1.2257917768938413 1.0553183902335288 0.9991406588280037 1.029722739348813 1.1127126949612236 1.0 22.47690011633105 -4.209611061455874 0.2881393357880165 1.0052916243659367 1.4428136073329025 0.5437387730657894 0.06572223287372714 6.679612765293193 0.4472945529038315 0.07818235211743675 1.0456364185899933 6.17147449544794e-05 4.209611061455874 0.43752198296696587 ALLYLCGGDD ddPTM_KYSE-520_SHP099_60min_R1 14 ALLYLCGGDD 10 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 0 ;;;;;;;;;;;;; 238.22 2.3528000000000003e-15 2425462000.0 3081376.0 3750206.0 9257950.0 1557920.0 3769077.0 3393220.0 2706274.0 2477597.0 6212051.0 4461375.0 False True 2910445.930709233 3570040.474586031 9854732.27024374 1705984.2483942711 4065681.9167853985 3372041.6553289522 2979850.5866089896 2469002.7942824853 5084099.131462122 4421850.688397223 0.6581963380957522 0.8073634154933563 2.2286442860004754 0.38580774626124587 0.9194525557937995 0.7625860511701736 0.6738921769629197 0.5583641258536973 1.1497672557788112 1.0 22.07621888015319 ALMGS(ph)PQLVAAVVR ddPTM_KYSE-520_SHP099_60min_R1 10 ALMGSPQLVAAVVR 14 0 P14923;C9JTX4;C9J826;C9JK18;C9JKY1 P14923 JUP Junction plakoglobin 1 ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR;ALMGS(1)PQLVAAVVR 197.29 1.7833e-12 6743250000.0 4720580.0 5657430.0 4265000.0 3503900.0 4012370.0 5110520.0 3776400.0 4660630.0 6413500.0 4946110.0 True False 4458720.017157077 5385638.570824442 4539928.724241284 3836909.602514051 4328120.691737581 5078623.349028863 4158155.3661123025 4644463.362329217 5248970.07117815 4902291.313415355 0.9095175566077797 1.0985961923736325 0.9260830158782183 0.7826767846321503 0.8828770905338635 1.0359693099288014 0.8482065018725654 0.9474066442398925 1.0707176982351279 1.0 22.22502478668523 -7.655339202690306 6.047030240422769 1.0338443213177269 0.9278727228237031 0.2008611170309349 0.08556976212597249 0.34842935383102985 16.95313136220186 0.06346346915535055 0.023004355437178065 2.2113668621950057e-08 7.655339202690306 -0.10597159849402371 ALMTIIPDLS(ph)PNNPLSK ddPTM_KYSE-520_SHP099_60min_R1 2 ALMTIIPDLSPNNPLSK 17 0 H0YFY6 H0YFY6 NUMA1 1 ALMTIIPDLS(1)PNNPLSK;ALMTIIPDLS(1)PNNPLSK 191.78 2.4631e-12 176818000.0 554430.0 848190.0 567000.0 479700.0 565820.0 822870.0 561340.0 728640.0 834280.0 759630.0 True False 523674.6626711963 807441.679240855 603549.7272320758 525290.5437729356 610346.8149245854 817734.1631018714 618085.72535046 726112.5179058551 682795.782487333 752900.2691831974 0.6955432002160362 1.072441745992239 0.8016330341956867 0.6976894089077829 0.8106609067715373 1.0861121938354605 0.8209397056279522 0.9644205848054701 0.9068874198014049 1.0 19.522099249448477 ALNGDDRPS(ph)SPVEELPSLAFENFLKPIK ddPTM_KYSE-520_SHP099_60min_R1 1 ALNGDDRPSSPVEELPSLAFENFLKPIK 28 2 O60673-2;O60673 O60673-2 REV3L DNA polymerase zeta catalytic subunit 1 ALNGDDRPS(0.587)S(0.413)PVEELPSLAFENFLKPIK 154.02 3.3167e-07 285120000.0 80815.0 82844.0 73709.0 67727.0 68732.0 75186.0 59352.0 80701.0 109050.0 85402.0 True False 76332.03084929162 78864.04988862092 78460.40007856987 74163.753717135 74140.81736841511 74716.7362851694 65351.87937969949 80421.0670667549 89249.26892679138 84645.40472175062 0.9017858807600128 0.9316991294195548 0.9269304144328648 0.8761698755050995 0.875898905701183 0.8827028062631506 0.7720664765503398 0.9500937154369796 1.054390007587237 1.0 16.369144127940963 -7.526569602031962 8.239524254884303 1.0196249245393727 0.8827439306970373 0.6477581261680017 0.043184790613510514 0.07677642315834202 50.09951005799495 0.029101809676842928 0.011737829546632423 2.974612495592311e-08 7.526569602031962 -0.13688099384233543 ALNGDDRPSS(ph)PVEELPSLAFENFLKPIK ddPTM_KYSE-520_SHP099_60min_R1 1 ALNGDDRPSSPVEELPSLAFENFLKPIK 28 2 O60673-2;O60673 O60673-2 REV3L DNA polymerase zeta catalytic subunit 1 ALNGDDRPS(0.141)S(0.859)PVEELPSLAFENFLKPIK 252.0 1.1309e-31 293000000.0 231970.0 239880.0 222990.0 179890.0 202350.0 215430.0 195240.0 263750.0 322570.0 221780.0 True False 219102.1616792692 228355.80473277916 237364.29219661516 196986.69151409948 218273.79378599173 214085.4214602991 214976.76455877713 262835.11280971306 263999.4193279702 219815.20174222888 0.9967561840249982 1.0388535593664974 1.079835654291852 0.8961468085592199 0.9929877099307958 0.973933648644333 0.9779886143219264 1.1957094446904197 1.2010061962755192 1.0 17.745931636519007 -7.254444670223407 24.96779880427077 1.1487683674455293 0.9942793771940484 0.4578825516475825 0.06832873747868551 418.8475277836659 1495093.2746767297 0.03262491935914709 0.018301825997483874 5.566155434068031e-08 7.254444670223407 -0.154488990251481 ALNHSVEDIEPDLLT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 ALNHSVEDIEPDLLTPR 17 0 I3L2K5;Q8IWR0 I3L2K5 ZC3H7A Zinc finger CCCH domain-containing protein 7A 1 ALNHSVEDIEPDLLT(1)PR;ALNHSVEDIEPDLLT(1)PR;ALNHSVEDIEPDLLT(1)PR;ALNHSVEDIEPDLLT(1)PR;ALNHSVEDIEPDLLT(1)PR 198.6 1.8699e-12 1560420000.0 1773060.0 1858060.0 1579120.0 1265070.0 1392240.0 1634050.0 1358400.0 1544750.0 1961380.0 1650860.0 True False 1674704.8272925166 1768796.0085950824 1680912.6018813334 1385301.8724428362 1501801.3672380012 1623851.287829929 1495720.3287064251 1539391.6227973595 1605242.8343661635 1636234.6647496438 1.0235113968501328 1.0810160954912427 1.0273053358996802 0.8466400952670183 0.9178398426534914 0.9924317842748983 0.9141233595214667 0.9408134761849077 0.9810590552497418 1.0 20.641948240215353 -5.023258426774069 23.21119491812464 0.9391490804282817 1.0527380164233873 0.5318071836498116 0.04426423482822883 207.2486346116674 206828.8296467094 0.011905276421181147 0.020835579666049375 9.47854275114651e-06 5.023258426774069 0.11358893599510556 ALPAAHIPAPPHEGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 ALPAAHIPAPPHEGSPR 17 0 P17029;E9PC66 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 ALPAAHIPAPPHEGS(1)PR;ALPAAHIPAPPHEGS(1)PR 149.44 9.7546e-06 1831910000.0 873280.0 873620.0 849320.0 787570.0 904290.0 763030.0 783360.0 788370.0 1000540.0 864350.0 True False 824837.4175594804 831649.9838696463 904068.526160048 862420.4160084447 975452.4782937224 758267.6467383935 862549.6736568501 785635.3284769409 818867.1575608606 856692.5314541246 0.962816164814027 0.9707683367544109 1.0553010478864673 1.0066860446940022 1.1386261026905629 0.885110607245907 1.0068369245530644 0.9170563529291269 0.9558472001278449 1.0 19.708417985731078 -6.289150157185499 24.9989440444853 0.9511529215682624 1.0241860770790412 0.2979368886542194 0.05658939188390654 976.694948946626 881110.5699038306 0.019740225552694744 0.017413270604139164 5.138659518672616e-07 6.289150157185499 0.07303315551077882 ALPASET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 ALPASETPK 9 0 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 ALPAS(0.029)ET(0.971)PK;ALPAS(0.001)ET(0.999)PK;ALPAS(0.246)ET(0.754)PK;ALPAS(0.026)ET(0.974)PK 157.14 0.00082718 3422370000.0 4898390.0 5808690.0 4217310.0 3457510.0 3845300.0 4776450.0 3813770.0 5078800.0 5605720.0 5353540.0 True False 4626666.542001621 5529631.813378552 4489164.550534578 3786110.710861716 4147903.233235853 4746638.403815837 4199303.090408353 5061182.828200831 4587862.5567014525 5306111.800591096 0.8719504442944859 1.0421250100238286 0.8460365554367869 0.7135376812904595 0.7817217934936426 0.8945605713183551 0.7914087090928906 0.9538402164155342 0.864637370850416 1.0 22.33922364301726 -8.240272288877796 0.9733297438568761 0.9977771465673803 0.8532150646850927 0.1929524725676377 0.0865685976396197 1.6498091696531807 3.084961729313494 0.09032092080524586 0.029822530819321402 5.7507926780756025e-09 8.240272288877796 -0.14456208188228759 ALPGQLKPFETLLSQNQGGK ddPTM_KYSE-520_SHP099_60min_R1 4 ALPGQLKPFETLLSQNQGGK 20 1 P09211;A0A087X243 P09211 GSTP1 Glutathione S-transferase P 0 ;;; 239.7 4.2321999999999995e-23 4245490000.0 954234.0 1001751.0 920973.0 713203.0 1024210.0 1094194.0 622513.0 775201.0 906496.0 707949.0 False True 901300.7378016817 953625.3783010938 980340.3931889007 780985.5986876986 1104809.5000422574 1087364.729375343 685442.689181408 772512.0086642739 741899.1773045454 701677.1226359876 1.2844949745771517 1.3590657975545979 1.3971388856259983 1.1130270226764316 1.5745268933549152 1.5496653578934487 0.9768633849802717 1.1009508273009974 1.057322739150246 1.0 19.42044780022632 -6.773099759060243 24.9990103826677 1.0421967384632262 1.376250706715718 0.6453905273490678 0.1255203388445827 155.68063676985287 333764.8684418825 0.05473695194694871 0.037246200105941166 1.6861656623674546e-07 6.773099759060243 0.3340539682524917 ALPLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 ALPLSPR 7 0 J3KTI7;J3QR52;J3QLN7;Q99741 J3KTI7 CDC6 Cell division control protein 6 homolog 1 ALPLS(1)PR;ALPLS(1)PR;ALPLS(1)PR;ALPLS(1)PR;ALPLS(1)PR;ALPLS(1)PR;ALPLS(1)PR;ALPLS(1)PR;ALPLS(1)PR 126.62 0.002221 10629710000.0 7393300.0 7815880.0 7516150.0 6092650.0 6616930.0 6838460.0 6373800.0 6891490.0 8092580.0 7403940.0 True False 6983178.910821839 7440393.392924933 8000653.055265195 6671693.62417798 7137644.74581835 6795778.634542068 7018125.906293451 6867585.02967586 6623171.46934044 7338346.8517781515 0.9516010965234968 1.0139059304783413 1.0902527799332025 0.9091548490327035 0.9726502289938546 0.9260639721459044 0.9563633401428677 0.9358490636091668 0.9025427120190677 1.0 22.807023665449766 -5.281400767483932 24.993710979755523 0.9416166291217001 1.0181185487556228 0.4105912884858237 0.04134068991817067 743.3947927181316 930804.983823994 0.011413713605187519 0.016956192458026355 5.231174803271985e-06 5.281400767483932 0.07650191963392272 ALPLS(ph)SAEKR ddPTM_KYSE-520_SHP099_60min_R1 1 ALPLSSAEKR 10 1 Q9UPY3-2;Q9UPY3 Q9UPY3-2 DICER1 Endoribonuclease Dicer 1 ALPLS(0.551)S(0.449)AEKR 67.153 0.029095 0.0 300340.0 315070.0 305640.0 217660.0 231710.0 270260.0 242070.0 258310.0 415800.0 217220.0 True False 283679.5414870533 299933.56427028845 325342.0434412904 238346.3409581347 249944.25875044343 268573.2070921434 266540.79797553376 257413.98290000716 340301.2014650153 215295.59979460252 1.3176281436206352 1.3931244510172651 1.5111411647598696 1.1070655470224342 1.1609352861317028 1.2474625925860496 1.2380225059398355 1.1956304873187684 1.5806231144048988 1.0 17.715959308482706 -5.25872973968895 24.999735511727355 1.226302895353204 1.405880569678117 0.25636729286665605 0.14690241386594605 349.8899237877532 3228145.3536016243 0.03971649497679707 0.06496541996635158 5.511505692560161e-06 5.25872973968895 0.1795776743249129 ALPLSS(ph)AEKR ddPTM_KYSE-520_SHP099_60min_R1 3 ALPLSSAEKR 10 1 Q9UPY3-2;Q9UPY3 Q9UPY3-2 DICER1 Endoribonuclease Dicer 1 ALPLS(0.004)S(0.996)AEKR;ALPLS(0.157)S(0.843)AEKR;ALPLS(0.002)S(0.998)AEKR 167.84 3.4589000000000004e-05 1958040000.0 672377.0 563039.0 529758.0 531332.0 625996.0 552093.0 563631.0 531769.0 665464.0 547770.0 True False 635078.9074596806 535989.7613012309 563907.0483227699 581829.6335292088 675258.3237699817 548647.1827985 620608.3219884658 529924.4174548183 544632.5125822867 542917.1839586113 1.1697528209165968 0.9872403695037426 1.0386612636039878 1.0716729009880888 1.2437593499001485 1.0105540937166682 1.1430994271785238 0.9760686033014133 1.0031594664423187 1.0 19.050372621998118 -7.2752889612004354 24.697066810768707 0.9922105141817397 1.0902349488315677 0.2895878388818346 0.07286283308710717 962.7725733715782 1716840.3738453242 0.03956163623782673 0.019158098639239313 5.3053133363576e-08 7.2752889612004354 0.09802443464982802 ALPNNT(ph)SSSPQPK ddPTM_KYSE-520_SHP099_60min_R1 3 ALPNNTSSSPQPK 13 0 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 ALPNNT(0.449)S(0.184)S(0.184)S(0.184)PQPK;ALPNNT(0.363)S(0.363)S(0.204)S(0.07)PQPK;ALPNNT(0.272)S(0.249)S(0.24)S(0.24)PQPK 189.61 1.1949000000000002e-07 4590100000.0 2755280.0 3184870.0 2225500.0 1831920.0 2018000.0 2786970.0 2255540.0 2708890.0 3022350.0 2776400.0 True False 2602439.1258854936 3031864.0646126694 2368959.290925903 2006025.126013166 2176805.119150638 2769575.4864559704 2483551.9951490685 2699493.49284968 2473567.427243357 2751803.2560065147 0.9457213629662674 1.1017735581186083 0.8608752409006869 0.7289856648125199 0.7910467851941101 1.006458394294964 0.9025180087740942 0.9809907328793747 0.8988896360392639 1.0 21.391945895566835 -8.790636962500853 13.802096281981118 0.9999999999957357 0.9124832152490711 0.06264255313217149 0.10090879740082824 0.0 0.0 0.10676180583003661 0.025893541306995553 1.6194331962582732e-09 8.790636962500853 -0.08751678474666469 ALPNNTSSS(ph)PQPK ddPTM_KYSE-520_SHP099_60min_R1 9 ALPNNTSSSPQPK 13 0 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 ALPNNT(0.031)S(0.031)S(0.031)S(0.906)PQPK;ALPNNT(0.091)S(0.033)S(0.02)S(0.856)PQPK;ALPNNT(0.003)S(0.051)S(0.023)S(0.923)PQPK;ALPNNTS(0.001)S(0.073)S(0.926)PQPK;ALPNNTSSS(0.999)PQPK;ALPNNTSS(0.001)S(0.999)PQPK;ALPNNTSS(0.031)S(0.969)PQPK;ALPNNTS(0.001)S(0.023)S(0.975)PQPK;ALPNNT(0.001)S(0.006)S(0.074)S(0.919)PQPK 301.35 1.0012e-30 44042900000.0 17331410.0 19868170.0 14311350.0 11070070.0 11699600.0 17881440.0 13307430.0 17557390.0 19693350.0 17475150.0 True False 16370002.137990737 18913673.290468853 15233882.519969618 12122166.124462092 12620291.958381977 17769835.3001766 14652674.89240117 17496487.512015652 16117534.06895394 17320333.766460966 0.9451320256708651 1.0919924260982328 0.8795374688141665 0.6998806309342267 0.7286402287939662 1.0259522443260332 0.8459810930880881 1.0101703435932505 0.930555628215657 1.0 24.045963395579783 -7.265018897908894 24.870927116353982 0.97777224079724 0.8875904364447472 0.12010057099861948 0.11415106136697228 762.1357208736365 5295349.810983562 0.06578191810285725 0.03356536065748363 5.432266929882883e-08 7.265018897908894 -0.09018180435249279 ALPPLPRPPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 ALPPLPRPPTPK 12 1 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 ALPPLPRPPT(1)PK;ALPPLPRPPT(1)PK 124.62 0.00027536 2888200000.0 1734720.0 2099280.0 1506660.0 1351540.0 1425430.0 2118740.0 1441730.0 1951550.0 2279500.0 1902290.0 True False 1638491.6235214146 1998427.4377164776 1603781.7143412346 1479989.955244681 1537603.2314127302 2105516.1577533036 1587474.138328856 1944780.5285451957 1865600.261518763 1885437.1905592259 0.8690247714035139 1.0599278765280633 0.8506152962144279 0.7849585033409212 0.8155154884563791 1.1167256953963032 0.841966068282554 1.0314745769750986 0.9894788703968551 1.0 20.846467660202567 -6.237767891497455 24.961952393723706 0.9882735483767588 0.8797570873851442 0.2916184360781662 0.09297894218211622 1187.6952558943935 1252444.171223246 0.03173545636715986 0.031716748112892615 5.784050931715827e-07 6.237767891497455 -0.1085164609916146 ALPQT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 ALPQTPR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ALPQT(1)PR;ALPQT(1)PR;ALPQT(1)PR;ALPQT(1)PR;ALPQT(1)PR 112.11 0.013752 29771600000.0 26470100.0 24897900.0 20517800.0 17327970.0 18808400.0 26081900.0 21242500.0 25235500.0 24842700.0 27965800.0 True False 25001750.786163855 23701767.51149017 21840410.21764072 18974815.058955844 20288514.074842833 25919113.187510405 23389899.206821434 25147963.940509953 20331891.913503923 27718044.76906319 0.9020026843332377 0.8551024326919449 0.7879491645102382 0.6845654236093202 0.7319605060125798 0.9350989004981831 0.8438509787287555 0.9072777012243747 0.7335254734921585 1.0 24.724322157564597 -6.2606986745201585 24.9986438829412 0.8756492385677365 0.7895754268413844 0.22137356857182766 0.08514160848589682 120.18645245688272 4056335.8045947403 0.02991556344513222 0.028249061636049805 5.486575065884266e-07 6.2606986745201585 -0.08607381172635209 ALPQT(ph)PRPR ddPTM_KYSE-520_SHP099_60min_R1 6 ALPQTPRPR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR;ALPQT(1)PRPR 123.67 0.0019006000000000001 72665300000.0 12609530.0 12603410.0 11471350.0 8737869.0 9114916.0 11433590.0 9042922.0 10882800.0 13591770.0 11379650.0 True False 11910054.23442514 11997923.26549591 12210811.575808953 9568313.442623897 9832208.032422224 11362228.723735124 9957068.80617386 10845050.10686462 11123847.188639129 11278835.154233724 1.0559649176142518 1.063755529842305 1.0826305561550293 0.8483423431392425 0.8717396697416505 1.007393810474311 0.8828100304698828 0.9615399071413616 0.986258513093312 1.0 23.42711474223309 -5.241435299914222 24.913603450644327 0.933239008502372 1.067080873415128 0.5651839528691778 0.05241859298425989 568.6263051187409 708181.0764974859 0.014417067605607988 0.024927417729522443 5.735413049044223e-06 5.241435299914222 0.13384186491275607 ALPQTPRPR ddPTM_KYSE-520_SHP099_60min_R1 4 ALPQTPRPR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 ;;; 113.71 0.0010900999999999999 718510000.0 417635.0 377382.0 287410.0 217517.0 321146.0 376845.0 241401.0 354188.0 361496.0 316121.0 False True 394467.9540152682 359252.00225806923 305936.90847225924 238189.75028112947 346418.3631292124 374492.9705714452 265804.16892672237 352959.4044961002 295857.43897257623 313320.41387841624 1.2589921899194898 1.146596220179502 0.9764346493905048 0.7602113993554178 1.1056361085481006 1.1952396140928339 0.8483461566914293 1.126512633272168 0.9442648032738253 1.0 18.257279243640575 -4.576689806734835 3.46286020894747 0.9970766080789214 1.243129711892914 0.3327530955445488 0.12249733280823123 0.2706188195998835 6.387569683232209 0.03264542159203924 0.11655844268185066 2.6503924959894173e-05 4.576689806734835 0.2460531038139927 ALPSLNTGSSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 ALPSLNTGSSSPR 13 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 ALPSLNTGSS(0.005)S(0.995)PR;ALPSLNTGS(0.002)S(0.044)S(0.954)PR;ALPSLNTGSS(0.051)S(0.949)PR;ALPSLNTGSS(0.033)S(0.967)PR;ALPSLNTGS(0.031)S(0.111)S(0.858)PR;ALPSLNTGS(0.001)S(0.291)S(0.708)PR;ALPSLNT(0.001)GS(0.014)S(0.105)S(0.88)PR;ALPSLNTGS(0.004)S(0.03)S(0.966)PR;ALPSLNTGSS(0.029)S(0.971)PR 203.53 5.8907e-09 103426100000.0 27746300.0 27339600.0 24139890.0 18540910.0 19762620.0 24944010.0 21679720.0 24055420.0 28758400.0 23658890.0 True False 26207157.4281222 26026164.57842376 25695985.934589617 20303032.511872135 21317825.760073725 24788325.18107928 23871317.671277437 23971977.362597223 23536599.500268124 23449290.640937883 1.1176098172611508 1.1098913385886036 1.0958107999109126 0.8658271511389348 0.9091032256155742 1.057103413516642 1.017997432707102 1.0222900867093536 1.0037233049249608 1.0 24.483040944978622 -5.036373450477796 23.76349379175542 0.9844717267241784 1.1110257473911163 0.5405685038290011 0.05314404661764822 257.0311252796879 167923.48455263796 0.01593093725569153 0.02760909832408946 9.19658415989618e-06 5.036373450477796 0.12655402066693788 ALPTSKPEGS(ph)LHSS(ph)PVGPSSSK ddPTM_KYSE-520_SHP099_60min_R1 1 ALPTSKPEGSLHSSPVGPSSSK 22 1 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 ALPT(0.016)S(0.018)KPEGS(0.959)LHS(0.139)S(0.867)PVGPSSSK 83.36200000000001 0.0031712 422600000.0 289460.0 281840.0 254220.0 341990.0 248030.0 233020.0 255530.0 276680.0 366210.0 231810.0 True False 273403.0767757961 268299.9833495351 270607.4279663815 374492.62677695754 267548.54990234505 231565.63574561963 281361.4661324741 275720.2616575973 299715.4954028458 229756.3437454512 1.1899696535852844 1.1677587611978484 1.1778017684081425 1.6299555462627868 1.1644881944968803 1.0078748293547575 1.2246080414832705 1.2000550546846702 1.3044927966598514 1.0 17.809745170396187 ALQAPHS(ph)PSKTDGK ddPTM_KYSE-520_SHP099_60min_R1 1 ALQAPHSPSKTDGK 14 1 F2Z2Z8;Q5T173;Q96AQ6-3;Q96AQ6-2;Q96AQ6 F2Z2Z8 PBXIP1 Pre-B-cell leukemia transcription factor-interacting protein 1 1 ALQAPHS(0.914)PS(0.037)KT(0.05)DGK 86.772 0.001894 1010500000.0 976130.0 1206400.0 939810.0 2017800.0 1185200.0 1421800.0 980080.0 1075100.0 1708500.0 1102300.0 True False 921982.1230330874 1148442.7331566836 1000391.656349167 2209571.105326308 1278468.4971344564 1412926.0188100697 1079156.0510590363 1071370.7290302252 1398279.4677801314 1092534.4795764221 0.8438929299426245 1.051172987787019 0.9156614047888181 2.022426885953259 1.1701859493076332 1.2932553115924212 0.9877546853051514 0.9806287573144582 1.2798492806581694 1.0 20.059247380152083 -10.234792307744131 5.764922289400433 0.9999931057172706 1.1781050164704858 0.02526680154351435 0.31756414252524134 2.903002782130468e-05 3.8530204199214065e-06 0.31660761767275825 0.07678564978535526 5.823816630393345e-11 10.234792307744131 0.1781119107532152 ALQAS(ph)ALK ddPTM_KYSE-520_SHP099_60min_R1 4 ALQASALK 8 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BR68 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 ALQAS(1)ALK;ALQAS(1)ALK;ALQAS(1)ALK;ALQAS(1)ALK 136.02 0.00071195 1730990000.0 4299390.0 4777220.0 4122640.0 3573630.0 3810390.0 4174640.0 3799330.0 4347840.0 5392810.0 4315120.0 True False 4060894.2660785243 4547715.1804465875 4388391.97085723 3913266.720748967 4110246.0148465796 4148584.5232559163 4183403.3542875387 4332758.357833487 4413611.645677119 4276891.393912565 0.9494967003039927 1.0633225774494752 1.0260704719094265 0.9149792127803019 0.9610358637343055 0.9699999698754866 0.9781411237708559 1.0130625163875893 1.0319672021504105 1.0 22.02813114164173 -7.305002359740294 5.57543359241412 1.0175148401088665 0.9816973682798457 0.14051698033696047 0.03901695442398479 0.4647721742126356 37.006241402585786 0.02342258257157411 0.011200359676345566 4.9544749878209226e-08 7.305002359740294 -0.03581747182902084 ALQASALK ddPTM_KYSE-520_SHP099_60min_R1 2 ALQASALK 8 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BR68 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ; 147.19 0.0036144 1201930000.0 1797060.0 2275600.0 1769130.0 1313360.0 2310600.0 2364400.0 1806100.0 2114560.0 2140850.0 2339700.0 False True 1697373.4994497055 2166276.7602547603 1883170.950508083 1438181.339523917 2492431.074484375 2349642.90257035 1988678.2138373628 2107225.084902012 1752125.6064366961 2318972.078259055 0.7319508136225562 0.9341538781618581 0.812071420852059 0.6201805330073733 1.0747999503105454 1.0132260429518931 0.8575688480606213 0.9086892872310863 0.7555613208383634 1.0 21.145054018544958 -5.767411231340309 24.999999972838747 0.9304509973430134 0.7886639485062701 0.33228826083944674 0.11055113780781395 203.62770728411516 852446.5447560891 0.03544272766051721 0.041233584288764176 1.7083968762420963e-06 5.767411231340309 -0.1417870488367433 ALQDEWDAVMLHSFTLR ddPTM_KYSE-520_SHP099_60min_R1 2 ALQDEWDAVMLHSFTLR 17 0 Q9UMS4;F5GY56 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 0 ; 155.79 3.1633e-06 127133100.0 72483.3 58770.6 45568.0 56883.5 78310.0 41552.7 39915.3 48677.1 45912.3 33394.9 False True 68462.50685712372 55947.17215953091 48505.38619137789 62289.69073735209 84472.55147704968 41293.35418610854 43950.32805978769 48508.25050142054 37575.78367489707 33099.047166839075 2.0684132238620516 1.6902955507306168 1.465461707912062 1.881917942331531 2.552114296561387 1.247569272250202 1.3278426970496051 1.4655482454497806 1.1352527305542228 1.0 15.014502065842906 -6.384218894636262 21.10239881926097 1.2700418376484894 1.8907516583469008 0.592686401121002 0.2869301989866053 4.423784754461965 742.6004819750533 0.1055726530658692 0.09310617085680802 4.1283936878806206e-07 6.384218894636262 0.6207098206984114 ALQESATGQPEPTSS(ph)PDNKPFK ddPTM_KYSE-520_SHP099_60min_R1 1 ALQESATGQPEPTSSPDNKPFK 22 1 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 ALQESATGQPEPTS(0.084)S(0.916)PDNKPFK 146.2 5.0117e-07 717310000.0 726450.0 689560.0 574830.0 476730.0 605560.0 588540.0 515850.0 710570.0 777870.0 672510.0 True False 686152.3703578273 656432.5025493389 611884.4615605191 522038.2758658995 653214.126834915 584866.7035521712 567997.1522108432 708105.198518285 636628.4165069538 666552.0846048631 1.0294054826406902 0.9848180175424353 0.9179844691705504 0.7831920234340991 0.9799896240998858 0.8774508655222112 0.8521421886296493 1.06234038550499 0.9551067819169026 1.0 19.346358086833202 -7.264588863975419 24.922183686628216 1.0065426842704135 0.9160916548163046 0.24244375267301166 0.07120159790677259 404.73349101896014 3202657.324267776 0.038457389472515466 0.01970019742088668 5.437648568760736e-08 7.264588863975419 -0.09045102945410888 ALQEVGSGGTLGLSS(ph)PKS ddPTM_KYSE-520_SHP099_60min_R1 1 ALQEVGSGGTLGLSSPKS 18 1 A0A0M3HER3 A0A0M3HER3 1 ALQEVGSGGTLGLS(0.006)S(0.994)PKS 262.17 5.4303e-29 0.0 213750.0 350470.0 251570.0 181440.0 208770.0 288040.0 186900.0 320000.0 342450.0 304370.0 True False 201892.86139993908 333632.89513380546 267786.60472623195 198684.0030480749 225199.01126118857 286242.23551698704 205793.6759682209 318889.9946885617 280269.7124619876 301673.51859627693 0.6692429031867656 1.1059402783719279 0.8876702402394322 0.658606045278934 0.7464991037631231 0.9488477372787194 0.6821734865088708 1.0570698952045745 0.9290497679946063 1.0 18.20262853430688 -7.279483761347054 24.711651955830707 0.9947948794461117 0.8247885605797689 0.26940510592367495 0.13597726601724996 1095.3353924573523 1500044.9458168047 0.07487821372450917 0.03608938104551687 5.254316610950826e-08 7.279483761347054 -0.17000631886634276 ALQGS(ph)TGAAGPR ddPTM_KYSE-520_SHP099_60min_R1 1 ALQGSTGAAGPR 12 0 Q9HCE7-2;Q9HCE7 Q9HCE7-2 SMURF1 E3 ubiquitin-protein ligase SMURF1 1 ALQGS(0.5)T(0.5)GAAGPR 69.954 0.025091 1064600000.0 1284600.0 1205800.0 1175000.0 1154800.0 1278800.0 1186500.0 1042500.0 1375700.0 1596000.0 1165300.0 True False 1213340.6772133869 1147871.5580572993 1250742.380066471 1264551.844796719 1379434.2846233072 1179094.613390173 1147886.0738195302 1370928.017790795 1306206.6318859174 1154976.3485896825 1.0505329210377095 0.9938485402397559 1.0829160108721936 1.0948725022298829 1.1943398549309738 1.02088204215605 0.9938611082566235 1.186974970928891 1.130937991484327 1.0 20.13943187800296 -4.867100911831291 6.1955024151460645 1.0937628010668778 1.022760571005761 0.12863447776039516 0.06775757168861574 0.3860560630731796 19.627988241950863 0.01830625568842538 0.0390572891214255 1.3579978681498086e-05 4.867100911831291 -0.07100223006111683 ALQHTES(ph)PSETNKPHSK ddPTM_KYSE-520_SHP099_60min_R1 10 ALQHTESPSETNKPHSK 17 1 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 ALQHTES(1)PSETNKPHSK;ALQHTES(0.999)PS(0.001)ETNKPHSK;ALQHTES(0.994)PS(0.006)ETNKPHSK;ALQHTES(0.995)PS(0.005)ET(0.001)NKPHSK;ALQHTES(0.993)PS(0.006)ET(0.001)NKPHSK;ALQHTES(0.999)PS(0.001)ETNKPHSK;ALQHTES(0.998)PS(0.002)ETNKPHSK;ALQHTES(0.992)PS(0.008)ETNKPHSK;ALQHT(0.001)ES(0.999)PSETNKPHSK;ALQHTES(0.968)PS(0.022)ET(0.009)NKPHSK 297.68 4.843199999999999e-38 19131820000.0 9376120.0 9496240.0 8576580.0 10367750.0 8403790.0 7815650.0 8668150.0 8648424.0 9983210.0 7278670.0 True False 8856007.93276816 9040026.376253163 9129440.06981319 11353097.84282229 9065120.461975696 7766869.629281834 9544411.194991605 8618424.635701345 8170510.72024424 7214186.646519576 1.227582313390889 1.2530901706867328 1.2654843182103712 1.5737183412491131 1.2565686065731452 1.0766105743921797 1.323005858130414 1.1946495229450755 1.132561592953245 1.0 22.78240531855512 -6.002759973062927 24.999819843267215 1.1684064979873643 1.3317804164033913 0.341054676743757 0.11943210935184828 149.11956438728825 1350745.1168580328 0.03814524387201893 0.04248390070914311 9.936650779344613e-07 6.002759973062927 0.163373918416027 ALQLILDVLNPET(ph)SEDENDRVVVTDDSDERR ddPTM_KYSE-520_SHP099_60min_R1 1 ALQLILDVLNPETSEDENDRVVVTDDSDERR 31 2 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 ALQLILDVLNPET(0.435)S(0.435)EDENDRVVVT(0.062)DDS(0.069)DERR 59.873000000000005 0.029988 88545000.0 8444.3 15452.0 10349.0 16331.0 12572.0 11035.0 13160.0 13988.0 14464.0 8980.6 True False 7975.877845705286 14709.662726075143 11016.113098985454 17883.09332990582 13561.34487510497 10966.126471774582 14490.341229223028 13939.47889282374 11837.702207768107 8901.038870801074 0.8960614554632851 1.6525781922297464 1.2376210528776208 2.009101812662501 1.5235687734823338 1.2320052334281801 1.6279382035682457 1.5660507829654289 1.3299236616750938 1.0 13.119758012458641 -8.071822154427307 4.557064497250162 1.0001281752027598 1.4829782571122518 0.19894714524509738 0.28338125738949443 0.5440053140733703 28.780317589509238 0.2639275563435434 0.06897722245671323 8.475744286810576e-09 8.071822154427307 0.4828500819094921 ALQLSNS(ph)PGASSAFLK ddPTM_KYSE-520_SHP099_60min_R1 1 ALQLSNSPGASSAFLK 16 0 Q12802-2;Q12802;Q12802-4;H0YMW2 Q12802-2 AKAP13 A-kinase anchor protein 13 1 ALQLSNS(1)PGASSAFLK 157.8 8.1049e-07 2485000000.0 3839500.0 4504600.0 3131100.0 3196400.0 3218200.0 4412300.0 3130900.0 4356100.0 5313000.0 4705200.0 True False 3626515.281146511 4288192.254457557 3332935.715937133 3500184.8949672994 3471454.03094677 4384761.199040416 3447401.9266393958 4340989.705821386 4348293.129830748 4663515.588590213 0.7776355009982525 0.9195192281439082 0.7146830867450116 0.7505464125671358 0.744385638902988 0.9402265556414565 0.73922813404416 0.930840612271583 0.9324066891658537 1.0 22.152986509184736 -7.578722781593489 1.1144021654141976 0.999606869325014 0.7953938634222981 0.4735820809359109 0.0744905749342044 0.42531103845862583 0.988904366033162 0.06864085428590179 0.02380731893993428 2.6380147433634093e-08 7.578722781593489 -0.20421300590271585 ALQS(ph)PALGLR ddPTM_KYSE-520_SHP099_60min_R1 6 ALQSPALGLR 10 0 P46940;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 ALQS(1)PALGLR;ALQS(1)PALGLR;ALQS(1)PALGLR;ALQS(1)PALGLR;ALQS(1)PALGLR;ALQS(1)PALGLR 172.33 3.8878e-05 3014160000.0 3158100.0 3311120.0 2801337.0 2276760.0 2406606.0 3199645.0 2339537.0 3142102.0 3561100.0 3180550.0 True False 2982913.8974837326 3152048.8251075535 2981915.6653176737 2493142.5858671437 2595992.200484954 3179674.828706954 2576040.231640789 3131202.7815341232 2914494.008025647 3152372.801430457 0.9462440153430366 0.9998972277889353 0.945927354773701 0.790878091809391 0.823504186848385 1.0086607863334274 0.8171749960765604 0.9932844174119485 0.9245397646823792 1.0 21.58800672815753 -10.187853734017308 8.845330160631669 1.0000000055303504 0.9155782230661295 0.0979124811839962 0.07580569014520874 8.514750913944858e-09 7.641895980372427e-10 0.07560382768012527 0.01833662050859081 6.488529238462666e-11 10.187853734017308 -0.08442178246422094 ALQS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 ALQSPK 6 0 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347 A0A494C1K3 GTF2I General transcription factor II-I 1 ALQS(1)PK;ALQS(1)PK;ALQS(1)PK;ALQS(1)PK;ALQS(1)PK 103.87 0.010921 18979100000.0 35893300.0 28837500.0 26819600.0 28814800.0 33047900.0 35513400.0 44761300.0 20738800.0 34814400.0 36637200.0 True False 33902227.09748039 27452103.21403004 28548434.328877214 31553349.928514484 35648581.71317064 35291747.69757316 49286209.03219 20666861.943272296 28492982.55960467 36312622.91131024 0.9336209940075937 0.7559933987990598 0.7861848591494963 0.86893612740617 0.981713213067493 0.9718864920270162 1.3572748284409633 0.5691371288091452 0.7846577932196135 1.0 25.113967805984817 -5.562403063678342 4.894475209438235 0.94411164450366 0.81918466597026 0.07494674042928684 0.18981722064423623 0.5611073009012316 31.592317881770143 0.05952819483718651 0.07935551467412821 2.739030929053485e-06 5.562403063678342 -0.12492697853340007 ALQTS(ph)PQPPEGPGLPR ddPTM_KYSE-520_SHP099_60min_R1 2 ALQTSPQPPEGPGLPR 16 0 A0A2R8YGT1;F8W9A8;B7WPL9;Q6PFW1-7;Q6PFW1-4;Q6PFW1-3;Q6PFW1-2;Q6PFW1;H7C398;Q6PFW1-5 A0A2R8YGT1 PPIP5K1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 1 ALQT(0.05)S(0.95)PQPPEGPGLPR;ALQT(0.02)S(0.98)PQPPEGPGLPR 176.81 1.8686e-08 907360000.0 907060.0 1242250.0 749470.0 612930.0 736160.0 1031330.0 776060.0 936890.0 1177080.0 1122500.0 True False 856743.5736207196 1182570.4453447352 797782.0353943984 671182.682915876 794091.603822564 1024893.0869175611 854511.718415717 933640.1472617693 963351.943772101 1112555.523291784 0.7700681500243884 1.0629316205682875 0.7170716595194757 0.6032801679236718 0.7137545832077109 0.9212062368673063 0.7680620881620563 0.8391852161223853 0.8658911160871993 1.0 20.08544590646286 -8.227960008221809 0.9199195762472095 1.000112222206245 0.7924469352291552 0.22005900786548427 0.11775821802050597 1.5329295895619914 2.615120352585829 0.12210272967939129 0.04122652268564345 5.916161103245587e-09 8.227960008221809 -0.20766528697708986 ALRPEAPPPPPPAFSFQEFLPSLNSS(ph)PLDIR ddPTM_KYSE-520_SHP099_60min_R1 1 ALRPEAPPPPPPAFSFQEFLPSLNSSPLDIR 31 1 Q9P107;Q9P107-2;K7EJC2 Q9P107 GMIP GEM-interacting protein 1 ALRPEAPPPPPPAFSFQEFLPSLNS(0.163)S(0.836)PLDIR 210.86 1.9121e-22 90171000.0 37482.0 40113.0 37421.0 31791.0 34072.0 39755.0 22516.0 32365.0 49134.0 30436.0 True False 35402.79874148546 38185.91126915947 39833.21753571699 34812.4070816873 36753.2725568387 39506.8742986315 24792.13701498373 32252.7333690478 40212.50416734501 30166.360718849704 1.173585341348906 1.2658441508756038 1.3204515422646548 1.154014148612049 1.218352883179346 1.309633424689021 0.8218471311818584 1.0691622257534834 1.3330247072931767 1.0 14.880653039257178 ALRPPT(ph)SPGVFGALQNFK ddPTM_KYSE-520_SHP099_60min_R1 2 ALRPPTSPGVFGALQNFK 18 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 ALRPPT(0.5)S(0.5)PGVFGALQNFK;ALRPPT(0.5)S(0.5)PGVFGALQNFK 181.87 4.671300000000001e-09 6109300000.0 607910.0 614560.0 569820.0 467620.0 510040.0 692590.0 583570.0 823570.0 898150.0 696240.0 True False 574188.0204614599 585035.6151266336 606551.508944236 512062.4642049206 550177.2462693714 688267.2889067837 642562.9506943536 820713.2278926827 735068.6005190075 690071.8552665231 0.8320699012419425 0.8477894159307194 0.878968623796388 0.7420422384958001 0.7972753012175509 0.9973849587605012 0.9311536846350292 1.1893156076850904 1.0652058838642326 1.0 19.39638706797878 -6.651491588183409 1.6035942549614266 1.0840110820868738 0.8218158856374912 0.7083048013855135 0.06975902842217013 0.19929104000079173 1.0467086877002039 0.03658076836602847 0.024382317668704193 2.2310454200115031e-07 6.651491588183409 -0.2621951964493826 ALRPPTS(ph)PGVFGALQNFK ddPTM_KYSE-520_SHP099_60min_R1 2 ALRPPTSPGVFGALQNFK 18 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 ALRPPT(0.033)S(0.967)PGVFGALQNFK;ALRPPT(0.222)S(0.778)PGVFGALQNFK 128.74 8.2298e-06 214337000.0 383010.0 381000.0 341770.0 299300.0 343810.0 450260.0 380370.0 501480.0 533840.0 433980.0 True False 361763.67178849445 362696.1881073411 363801.0410513345 327745.38201217353 370865.89098869177 447449.76032453374 418821.5116534623 499740.48292631237 436908.11301126453 430135.2748313314 0.8410462776631202 0.8432142382406672 0.845782855623714 0.7619588561777271 0.8622075721041924 1.0402535818528063 0.973697197510003 1.161821669060449 1.0157458329419482 1.0 18.714430924104466 -6.222326265132794 3.6086482993442357 1.0467142169345034 0.8244345471899931 0.8010004131516839 0.05187372037128071 0.1005328278116852 2.7573301329745425 0.01815173850238791 0.0174677575620041 5.99340650484559e-07 6.222326265132794 -0.2222796697445103 ALS(ph)AIADLLTNEHER ddPTM_KYSE-520_SHP099_60min_R1 6 ALSAIADLLTNEHER 15 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28 O60716-5 CTNND1 Catenin delta-1 1 ALS(1)AIADLLTNEHER;ALS(1)AIADLLTNEHER;ALS(1)AIADLLTNEHER;ALS(1)AIADLLTNEHER;ALS(1)AIADLLTNEHER;ALS(1)AIADLLTNEHER 265.22 2.9676999999999995e-25 157808000.0 177472.0 192160.0 199090.0 192627.0 182298.0 185895.0 166808.0 183788.0 233013.0 192584.0 True False 167627.274378339 182928.34516195938 211923.65995526293 210934.21216458082 196643.81546626508 184734.760350751 183670.5805291975 183150.48232444163 190703.7129797199 190877.85558808473 0.8781913117259627 0.9583528932592347 1.110257967339046 1.1050742974595116 1.0302075893529699 0.9678166164513574 0.9622414290191914 0.9595166592801692 0.9990876751636364 1.0 17.542290214756658 -6.261780296018443 23.851921667260527 0.974234075465013 1.023329852934431 0.07698544275275743 0.06423110672175142 41.60981518552758 2911146.462683592 0.024335597485004735 0.022803498968901974 5.472927612285494e-07 6.261780296018443 0.04909577746941807 ALS(ph)DREEEEEDDEEEEEEVEAAAQR ddPTM_KYSE-520_SHP099_60min_R1 2 ALSDREEEEEDDEEEEEEVEAAAQR 25 1 Q8N3E9 Q8N3E9 PLCD3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3 1 ALS(1)DREEEEEDDEEEEEEVEAAAQR;ALS(1)DREEEEEDDEEEEEEVEAAAQR 194.34 1.7620999999999998e-15 1261560000.0 109387.0 147539.0 126641.0 164278.0 174408.0 143887.0 166082.0 166892.0 216204.0 109799.0 True False 103319.0850524216 140451.00497944612 134804.48149276443 179890.9317280182 188132.91735422428 142988.9478608275 182871.18936412013 166313.09060488563 176946.80365931225 108826.26628232942 0.949394742482293 1.2905983985067744 1.2387127308313544 1.6530102324867488 1.7287454929874058 1.3139194492795458 1.680395695003401 1.5282440194485527 1.6259567630507217 1.0 16.731667281593257 -4.54912710938063 1.3265274456162828 1.528262108225046 0.8954096745208563 0.36519542211911893 0.2147732477977983 0.7904618231263236 1.8023433040478614 0.06144610045665353 0.591001156615642 2.8240533095586677e-05 4.54912710938063 -0.6328524337041898 ALS(ph)IES(ph)LSPTDSSNGVNWR ddPTM_KYSE-520_SHP099_60min_R1 1 ALSIESLSPTDSSNGVNWR 19 0 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 2 ALS(0.997)IES(0.883)LS(0.1)PT(0.019)DSSNGVNWR 47.568000000000005 0.060801999999999995 0.0 92473.0 101160.0 73920.0 101470.0 87755.0 82859.0 88797.0 83344.0 111740.0 84703.0 True False 87343.33834964463 96300.12175574445 78685.00147618187 111113.678291932 94660.81924235083 82341.84624601464 97773.46733520659 83054.89911663593 91450.83273617315 83952.59731793686 1.040388756751226 1.1470773368815057 0.9372551176492363 1.3235287750673563 1.1275508116069461 0.9808135647570004 1.164627068831816 0.9893070824491439 1.0893151094520606 1.0 16.357287339372174 -6.205278167032561 24.968706849639933 1.0516324348708426 1.1186257956419015 0.10089365733907807 0.10375171553345768 751.1329402468601 333945.6814277024 0.03366289957494617 0.033662885661297146 6.233354591998941e-07 6.205278167032561 0.06699336077105889 ALS(ph)IESLSPTDSSNGVNWR ddPTM_KYSE-520_SHP099_60min_R1 10 ALSIESLSPTDSSNGVNWR 19 0 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 ALS(1)IESLSPTDSSNGVNWR;ALS(1)IESLSPTDSSNGVNWR;ALS(0.996)IES(0.004)LSPTDSSNGVNWR;ALS(0.816)IES(0.184)LSPTDSSNGVNWR;ALS(0.995)IES(0.005)LSPTDSSNGVNWR;ALS(0.747)IES(0.253)LSPTDSSNGVNWR;ALS(0.933)IES(0.067)LSPTDSSNGVNWR;ALS(1)IESLSPTDSSNGVNWR;ALS(0.999)IES(0.001)LSPTDSSNGVNWR;ALS(1)IESLSPTDSSNGVNWR 493.06 2.0369999999999992e-162 18056270000.0 3167412.0 3573052.0 2942546.0 2349488.0 2564176.0 3319114.0 2660750.0 3195748.0 3610524.0 3334401.0 True False 2991709.34228072 3401397.21865961 3132227.223400062 2572782.6331206765 2765962.0630342937 3298398.178363179 2929724.5764175663 3184662.6960811894 2954943.8555032974 3304860.8012647256 0.9052451894905326 1.0292104337217294 0.9477637370389097 0.7784844166919549 0.8369375381788539 0.9980445098023271 0.8864895535982635 0.9636299038260437 0.8941205191978071 1.0 21.65615807689549 -7.271751387114645 24.383425455377015 0.946656403683408 0.9129602599586425 0.06063232463207191 0.07244432425083036 2212.877654019215 5232459.167358691 0.041881866514997285 0.020518868523116192 5.348704596122298e-08 7.271751387114645 -0.03369614372476548 ALS(ph)ISPLSDASLDLQR ddPTM_KYSE-520_SHP099_60min_R1 5 ALSISPLSDASLDLQR 16 0 P10070 P10070 GLI2 Zinc finger protein GLI2 1 ALS(0.999)IS(0.001)PLSDASLDLQR;ALS(0.991)IS(0.009)PLSDASLDLQR;ALS(1)ISPLSDASLDLQR;ALS(0.999)IS(0.001)PLSDASLDLQR;ALS(0.999)IS(0.001)PLSDASLDLQR 293.52 1.7284000000000002e-37 356847000.0 348995.0 417626.0 377794.0 235724.0 288598.0 327782.0 300777.0 388824.0 441256.0 442487.0 True False 329635.55164571584 397562.6200905941 402147.20573177224 258127.13808699508 311309.0207020001 325736.1909534409 331182.47446063935 387475.260296204 361135.0335585541 438566.90942967654 0.7516197518740806 0.9065039143231179 0.9169574746410636 0.5885695717961715 0.7098324429146609 0.7427286098192781 0.7551469737908804 0.8835031826730535 0.8234434148900636 1.0 18.742437436921016 -8.117423181819317 1.0317106862930978 0.9960759142660834 0.7708189432936647 0.34980340481933103 0.09278143807250974 0.8369429257955887 1.9224789284494352 0.09636191220673189 0.031527212899949135 7.630918552157737e-09 8.117423181819317 -0.2252569709724187 ALS(ph)LDDK ddPTM_KYSE-520_SHP099_60min_R1 3 ALSLDDK 7 0 Q9NRR6-2;Q9NRR6 Q9NRR6-2 INPP5E 72 kDa inositol polyphosphate 5-phosphatase 1 ALS(1)LDDK;ALS(1)LDDK;ALS(1)LDDK 133.13 0.0019108 1251930000.0 2742230.0 2515490.0 2060640.0 2536680.0 2795390.0 2746710.0 2817430.0 3063280.0 3096670.0 2883300.0 True False 2590113.035400024 2394642.08457253 2193472.1515405714 2777765.304519346 3015371.289406593 2729566.7640496613 3102243.319867011 3052654.196654929 2534392.7886980986 2857756.2051734584 0.9063449956686599 0.8379448464629198 0.7675504815875059 0.9720091936081521 1.0551534395928528 0.9551433250703006 1.085552124513264 1.0681996564747693 0.8868470949726335 1.0 21.44645141487285 -5.417279158902196 5.331164584431114 1.0131608836377501 0.8385946523517946 0.5987166683830013 0.06272022575431979 0.14851684859467823 6.158787425044425 0.017760467565085473 0.026498862286045716 3.82578747569928e-06 5.417279158902196 -0.1745662312859555 ALS(ph)LDDKGWR ddPTM_KYSE-520_SHP099_60min_R1 5 ALSLDDKGWR 10 1 Q9NRR6-2;Q9NRR6 Q9NRR6-2 INPP5E 72 kDa inositol polyphosphate 5-phosphatase 1 ALS(1)LDDKGWR;ALS(1)LDDKGWR;ALS(1)LDDKGWR;ALS(1)LDDKGWR;ALS(1)LDDKGWR 178.22 2.4091e-05 2030610000.0 3613390.0 3462460.0 3300550.0 2710930.0 3154100.0 2948430.0 2658520.0 2551606.0 4049360.0 2941270.0 True False 3412948.0535856187 3296118.2243415797 3513308.7340667215 2968575.972129175 3402309.7256258787 2930027.7547054267 2927269.1462548636 2542755.0743353167 3314098.30005862 2915212.6360734357 1.1707372599010801 1.1306613396068406 1.2051637985484567 1.0183051264924592 1.1670880139325017 1.0050820027495304 1.0041357223937075 0.8722365713124136 1.1368290117328979 1.0 21.475169686993684 -6.2793445473323635 14.898910187114762 0.9956963578993944 1.1349990055342847 0.4446922958975015 0.07496991623923595 4.204187442525853 3496.7498844879647 0.025295437907359955 0.02253221678165439 5.256001163232119e-07 6.2793445473323635 0.1393026476348903 ALS(ph)MPDLDKLCSEDYSAGPSAVLFK ddPTM_KYSE-520_SHP099_60min_R1 1 ALSMPDLDKLCSEDYSAGPSAVLFK 25 1 O15018-2;O15018 O15018-2 PDZD2 PDZ domain-containing protein 2;Processed PDZ domain-containing protein 2 1 ALS(1)MPDLDKLCSEDYSAGPSAVLFK 131.81 2.579e-05 73598000.0 142090.0 149420.0 126270.0 115030.0 139490.0 123070.0 106700.0 140230.0 185290.0 129400.0 True False 134207.9844506073 142241.63891600736 134409.56623914337 125962.41661496933 150467.0694104672 122301.87447950148 117486.27729164883 139743.574859928 151646.00678079057 128253.61667167669 1.0464265097036094 1.109065323905363 1.0479982532050198 0.9821353961302103 1.1731994256010412 0.9535939621304295 0.9160465048904488 1.0895877908664755 1.1823916604940452 1.0 16.968639983939497 -11.47755777829527 2.1592791618859186 0.43968496939029195 1.0521459071909105 0.03709057290867768 0.08333459645015891 4627423.641753166 691920.3081581134 12719015.374863217 0.021339940390852904 3.3299845743290468e-12 11.47755777829527 0.6124609378006185 ALS(ph)PAELR ddPTM_KYSE-520_SHP099_60min_R1 4 ALSPAELR 8 0 A0A0G2JNZ2;A0A669KB89;Q14160;A0A0G2JMS7;A0A0G2JPP5;Q14160-2;Q14160-3;H0YCG0 A0A0G2JNZ2 SCRIB Protein scribble homolog 1 ALS(1)PAELR;ALS(1)PAELR;ALS(1)PAELR;ALS(1)PAELR 119.68 0.00095615 514920000.0 1743660.0 1825030.0 1404090.0 1421590.0 1648350.0 1612320.0 1448310.0 1895550.0 2236920.0 1574540.0 True False 1646935.7038999638 1737352.819374121 1494599.888023431 1556697.4861833795 1778065.7671714344 1602256.9128202633 1594719.3089434667 1888974.7794746978 1830751.7161643116 1560590.8005735825 1.0553283431471248 1.1132660904675147 0.9577141474075733 0.997505230462225 1.1393542538620123 1.026698934936286 1.0218689667767749 1.2104228595865234 1.173114512459918 1.0 20.573660870013658 -7.2449685567302575 24.894473216061016 1.143826520110992 1.044990249344237 0.21507771114286023 0.0709880799417785 942.6624406380091 1424770.331980334 0.03318605819508777 0.019086862120494392 5.688941177444614e-08 7.2449685567302575 -0.09883627076675516 ALS(ph)PEGALR ddPTM_KYSE-520_SHP099_60min_R1 1 ALSPEGALR 9 0 I3L2Z9;I3L100;I3L2W2;Q96JN8-2;Q96JN8;K7EPS7 I3L2Z9 NEURL4 Neuralized-like protein 4 1 ALS(1)PEGALR 117.52 0.00081125 294330000.0 263520.0 223370.0 226270.0 213470.0 197970.0 261600.0 193420.0 237410.0 251850.0 254630.0 True False 248902.02028590365 212638.96991479435 240855.7262448005 233758.12461790428 213549.1127047829 259967.25736440695 212972.7811972886 236586.48012191034 206120.38862184694 252374.17629914236 0.9862420313197056 0.8425543890146298 0.9543596328941004 0.9262363053374675 0.8461607119884579 1.0300866006839955 0.843877073004685 0.9374432978494651 0.8167253545684872 1.0 17.945204771321617 ALS(ph)PEGALRR ddPTM_KYSE-520_SHP099_60min_R1 2 ALSPEGALRR 10 1 I3L2Z9;I3L100;I3L2W2;Q96JN8-2;Q96JN8;K7EPS7 I3L2Z9 NEURL4 Neuralized-like protein 4 1 ALS(1)PEGALRR;ALS(1)PEGALRR 54.286 0.065124 893000000.0 1272540.0 1242310.0 1188370.0 1003010.0 1066270.0 1098410.0 939040.0 1074850.0 1465100.0 978560.0 True False 1201949.669454402 1182627.5628546737 1264974.2316592294 1098335.7688340463 1150179.3827535927 1091554.4157554985 1033967.3273472352 1071121.5962218747 1199074.7721654484 969890.7197081596 1.2392629860568922 1.2193410441235346 1.3042440823022419 1.1324324962760093 1.1858855429606359 1.1254406229229077 1.066065801370237 1.1043734870915927 1.236298840477874 1.0 19.88746267842043 -5.635501506760741 1.3583645826645143 1.1125912272330845 1.2500523417807023 0.4576688885694632 0.06443515872635257 0.4044751759626061 1.5455040544137113 0.023584007205618915 0.03765633494315127 2.3147201552074595e-06 5.635501506760741 0.1374611145476179 ALS(ph)PGLEESGLGLLAR ddPTM_KYSE-520_SHP099_60min_R1 7 ALSPGLEESGLGLLAR 16 0 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR;ALS(1)PGLEESGLGLLAR 244.57 3.2174e-23 2550803000.0 551010.0 667054.0 481882.0 392883.0 428229.0 576197.0 453270.0 553486.0 663313.0 611528.0 True False 520444.3768887966 635007.7245715328 512944.8847584614 430222.48219541926 461928.1860102871 572600.7407935751 499090.95508890046 551566.0862506035 542872.0799599893 606110.3376815853 0.8586627624262819 1.047676776146868 0.8462896157166888 0.709808850713635 0.7621189695876082 0.9447137017722106 0.8234325073516456 0.9100093695157595 0.89566543615889 1.0 19.20922092347513 -9.458996952563883 9.135232368066086 0.9999999219026049 0.8658583448479038 0.16795252755019652 0.089141376924377 0.0 0.0 0.09262218077943715 0.02246417850756902 3.475386001063949e-10 9.458996952563883 -0.1341415770547011 ALS(ph)PLPTR ddPTM_KYSE-520_SHP099_60min_R1 2 ALSPLPTR 8 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 ALS(1)PLPTR;ALS(1)PLPTR 175.88 7.7184e-05 3114500000.0 1722720.0 1753560.0 1549110.0 1392900.0 1310220.0 1774790.0 1530710.0 1951610.0 1953620.0 1551990.0 True False 1627157.2874428204 1669316.3454527801 1648968.1092636345 1525280.7972093462 1413326.859867964 1763712.8772850763 1685449.1050899676 1944840.320419197 1598891.8547524826 1538240.5760299494 1.0578041645750604 1.085211488674369 1.0719832352358447 0.9915749337115712 0.9187944212963256 1.1465780481730947 1.095699288754916 1.264327798086462 1.0394289941818258 1.0 20.55284972327606 -6.318108326788144 24.99988408551472 1.1248831410256115 1.0291592119358333 0.20624468667886475 0.07940697294909022 408.89477137784075 180385.36060472697 0.027949192319707463 0.0246488755792564 4.807194268555793e-07 6.318108326788144 -0.09572392908977823 ALS(ph)PVIPLIPR ddPTM_KYSE-520_SHP099_60min_R1 4 ALSPVIPLIPR 11 0 O14686-3;O14686 O14686-3 KMT2D Histone-lysine N-methyltransferase 2D 1 ALS(1)PVIPLIPR;ALS(1)PVIPLIPR;ALS(1)PVIPLIPR;ALS(1)PVIPLIPR 193.22 6.7759e-07 3128231000.0 2619580.0 2885380.0 2240020.0 1778080.0 1913980.0 2353910.0 1776200.0 2380640.0 2857040.0 2375770.0 True False 2474266.6753967353 2746762.013756325 2384415.273358723 1947068.188600755 2064599.336943479 2339218.374551421 1955755.630041487 2372382.115485556 2338273.556117383 2354722.526121092 1.0507678284594182 1.166490736503479 1.0126098709755598 0.8268779726705798 0.8767909229392179 0.9934157203671845 0.8305673421586455 1.0074996476946072 0.9930144763040062 1.0 21.16712563605231 -4.992090218895822 6.93831383836299 0.928038140531646 1.105174913911543 0.502163824240812 0.07006483009507941 0.10410814216349722 27.209826078755356 0.018578552450362742 0.037187321742833485 1.0183798112330692e-05 4.992090218895822 0.17713677337989697 ALS(ph)PVTSR ddPTM_KYSE-520_SHP099_60min_R1 9 ALSPVTSR 8 0 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80 Q96L91-4 EP400 E1A-binding protein p400 1 ALS(0.998)PVT(0.002)SR;ALS(1)PVTSR;ALS(1)PVTSR;ALS(0.999)PVT(0.001)SR;ALS(0.999)PVT(0.001)SR;ALS(1)PVTSR;ALS(1)PVTSR;ALS(0.999)PVT(0.001)SR;ALS(1)PVTSR 158.57 0.0002417 6568460000.0 13842430.0 14085010.0 11874970.0 10244130.0 11689130.0 13079110.0 10722360.0 12301180.0 14674200.0 12398160.0 True False 13074562.813699922 13408344.977568956 12640449.566823792 11217729.035189997 12608998.02894812 12997478.423040492 11806280.788949236 12258510.077697007 12009735.186478902 12288321.948022537 1.0639827690878418 1.09114531945728 1.0286554681990505 0.912877208347815 1.0260960025528292 1.057709789670027 0.96077241781976 0.9975739673446359 0.9773291452875332 1.0 23.550784583782576 -4.976219957072416 6.495274760923461 0.9916057614140981 1.0743009438490891 0.47426864043428807 0.03663878191405427 0.14654975605808476 22.114857283909796 0.009937237590994694 0.020461131065004953 1.056282398500932e-05 4.976219957072416 0.08269518243499108 ALS(ph)SAGPIPIRPPIVPVK ddPTM_KYSE-520_SHP099_60min_R1 4 ALSSAGPIPIRPPIVPVK 18 1 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 ALS(0.548)S(0.452)AGPIPIRPPIVPVK;ALS(0.878)S(0.122)AGPIPIRPPIVPVK;ALS(0.913)S(0.087)AGPIPIRPPIVPVK;ALS(0.921)S(0.079)AGPIPIRPPIVPVK 237.09 1.0482000000000002e-23 4862946000.0 1905950.0 1820800.0 1716250.0 1544330.0 1483900.0 1941140.0 1502850.0 1956410.0 2106520.0 1857360.0 True False 1800223.1540828692 1733326.034923479 1826882.221097092 1691102.6588802545 1600674.4877639406 1929024.6252306767 1654772.7444025734 1949623.670339528 1724029.0690478191 1840905.2354042127 0.9779010453450034 0.941561793398283 0.9923825441758594 0.9186255904742073 0.8695040119283902 1.047867423119754 0.8988907807843951 1.0590570513052202 0.9365115791358316 1.0 20.81198393206239 -6.27015171652749 24.996628348083775 0.9865580142421814 0.9418052702082016 0.16754032534385666 0.05386244392440868 1310.5633758448487 3760138.960115233 0.018161100074315276 0.016246582641930424 5.368442223327684e-07 6.27015171652749 -0.044752744033979774 ALS(ph)SDSILSPAPDAR ddPTM_KYSE-520_SHP099_60min_R1 9 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALS(0.997)S(0.003)DSILSPAPDAR;ALS(0.972)S(0.028)DSILSPAPDAR;ALS(0.974)S(0.026)DSILSPAPDAR;ALS(0.984)S(0.016)DSILSPAPDAR;ALS(0.498)S(0.498)DS(0.003)ILSPAPDAR;ALS(0.991)S(0.009)DSILSPAPDAR;ALS(0.975)S(0.025)DSILSPAPDAR;ALS(0.982)S(0.017)DSILSPAPDAR;ALS(0.991)S(0.009)DSILSPAPDAR 344.38 1.6724e-54 21030150000.0 10371800.0 10002980.0 6779230.0 5131540.0 6451190.0 8700440.0 7016640.0 8320800.0 9749320.0 9676040.0 True False 9796455.578329302 9522421.826020904 7216230.012951504 5619240.018746239 6958861.950749951 8646137.326695655 7725950.447007267 8291937.086889321 7979089.248357141 9590317.813445214 1.021494362219685 0.9929203610615361 0.7524495176619339 0.5859284465910302 0.7256132785290937 0.9015485716828009 0.8055990007104682 0.8646154640740248 0.8319942470697687 1.0 23.193147194816174 -9.276687894031834 14.622916438680653 1.0000023521329762 0.825740105312502 0.14701339845570993 0.1211934345704074 0.0 0.0 0.13009061032448885 0.031551607486407944 5.288251557386181e-10 9.276687894031834 -0.1742622468204742 ALS(ph)TCASHFLSVS(ph)IFCDS(ph)LLFMY(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 1 ALSTCASHFLSVSIFCDSLLFMYAR 25 0 A6NET4 A6NET4 OR5K3 Olfactory receptor 5K3 4 ALS(0.32)T(0.32)CAS(0.32)HFLS(0.045)VS(0.999)IFCDS(0.999)LLFMY(0.999)AR 42.903999999999996 0.067076 0.0 8070.1 6303.1 4365.5 3827.3 8086.7 6107.0 5795.8 7326.8 7910.5 6465.2 True False 7622.435465654496 6000.289614854017 4646.907115046963 4191.045441280294 8723.077282970993 6068.883947723375 6381.696025557059 7301.385040887977 6474.152607477155 6407.9233578494905 1.189532870476247 0.9363859833785096 0.7251814442122904 0.6540411311484249 1.3612955080502822 0.9470905953157502 0.9959070465066809 1.139430769243522 1.010335524619928 1.0 12.645641177116621 -5.748258639459762 24.9999275865421 1.0722303935228343 0.8697852226965681 0.24535308784430532 0.17109593959569144 355.21634297070483 673736.1963230052 0.05230120075138545 0.06711082913853851 1.7854239679183547e-06 5.748258639459762 -0.20244517082626623 ALS(ph)VGNIDDALQCYSEAIK ddPTM_KYSE-520_SHP099_60min_R1 2 ALSVGNIDDALQCYSEAIK 19 0 P31948;P31948-2;P31948-3;F5H783;F5GXD8 P31948 STIP1 Stress-induced-phosphoprotein 1 1 ALS(1)VGNIDDALQCYSEAIK;ALS(1)VGNIDDALQCYSEAIK 86.8 0.00083167 66113000.0 53861.0 65643.0 57835.0 48387.0 52193.0 63780.0 53857.0 50273.0 70758.0 63280.0 True False 50873.22296075846 62489.41174784825 61563.13663927184 52985.68593191794 56300.29216245252 63381.92536201026 59301.39115366755 50098.61469680639 57910.130864024904 62719.388431094994 0.8111243466069346 0.9963332441689957 0.9815646832543108 0.8448055259679274 0.8976537171484915 1.010563510702008 0.9455033385540337 0.7987739668706418 0.9233210385596529 1.0 15.936623871532417 -9.541517695092972 4.039185739121831 0.9999998414803681 0.9148272943884623 0.11945923174144568 0.07120136284237916 6309063.104189142 16419398.212846117 12.445584563596142 0.018448450470391526 2.873970492861415e-10 9.541517695092972 -0.0851725470919058 ALSAIADLLTNEHER ddPTM_KYSE-520_SHP099_60min_R1 2 ALSAIADLLTNEHER 15 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28 O60716-5 CTNND1 Catenin delta-1 0 ; 207.31 4.0426999999999995e-14 0.0 225670.0 201801.0 162196.0 160985.0 237420.0 199383.0 142934.0 163958.0 173817.0 150848.0 False True 213151.63523800822 192106.17705052378 172651.41368277563 176284.96599809497 256103.603264987 198138.5767396313 157383.1636214108 163389.26796608494 142256.21436999663 149511.60407796796 1.4256527883070065 1.2848914185305873 1.154769322070417 1.1790721334657417 1.7129346236659528 1.3252387863908217 1.0526484856609386 1.0928199785809267 0.9514727318142626 1.0 17.18989793542243 -6.7654777553985195 5.355690692175627 1.0288207967128307 1.3458768061013788 0.5326944095896637 0.1483800376099445 0.15652892941728977 13.558589969262123 0.06560803412112919 0.04659361044654856 1.7160196025447016e-07 6.7654777553985195 0.31705600938854817 ALSAS(ph)HTDLAH ddPTM_KYSE-520_SHP099_60min_R1 4 ALSASHTDLAH 11 0 H0YG16;Q07866-4;Q07866-6;Q07866-7;H0YJK1 H0YG16 KLC1 Kinesin light chain 1 1 ALSAS(0.988)HT(0.012)DLAH;ALSAS(0.963)HT(0.037)DLAH;ALSAS(1)HTDLAH;ALS(0.362)AS(0.588)HT(0.05)DLAH 260.98 2.4206999999999998e-20 7213500000.0 4946640.0 5794950.0 5744470.0 7243380.0 5325130.0 4991510.0 4977660.0 5037230.0 6266450.0 5035590.0 True False 4672240.018317638 5516551.9036027165 6114767.727676969 7931788.657398403 5744187.435154922 4960356.134583378 5480850.450080112 5019757.024828317 5128620.6443493115 4990978.59022974 0.9361370588653576 1.1053046619758757 1.2251640869882994 1.5892251417238183 1.150914060501011 0.9938644385879939 1.0981514648869335 1.0057660905728814 1.0275781696176811 1.0 22.25089128445678 -6.007283144917237 24.955101578379693 1.0347097852227658 1.2273812673306643 0.2504610200526288 0.15441772810013785 516.3657437345314 1769292.9590334 0.052965139074756196 0.0577022661473173 9.833697737850296e-07 6.007283144917237 0.19267148210789853 ALSGGGSVAS(ph)PPPSPAMPK ddPTM_KYSE-520_SHP099_60min_R1 1 ALSGGGSVASPPPSPAMPK 19 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 ALSGGGSVAS(1)PPPSPAMPK 176.04 4.2177e-09 345120000.0 274490.0 358550.0 217780.0 197530.0 225130.0 403120.0 319660.0 420620.0 476380.0 432860.0 True False 259263.49251775062 341324.71980547754 231818.44726031995 216303.19181043992 242846.450185522 400603.97855022846 351974.35238095984 419160.9673934463 389881.40056253964 429025.19715998357 0.6043083115723649 0.7955819892746241 0.5403376043992 0.5041736318572926 0.5660423951625492 0.9337539641077146 0.820404849670656 0.9770078078587564 0.9087610777722055 1.0 18.710702855845174 -6.264086442930192 24.976536106226213 0.9198247475232642 0.6039680509113328 0.7863166214456825 0.08488866759717918 117.44439101709457 1108148.8904698247 0.0311530019355192 0.02873965780686232 5.443942846204396e-07 6.264086442930192 -0.3158566966119314 ALSGTS(ph)PDDVQPGPSVGPPSK ddPTM_KYSE-520_SHP099_60min_R1 1 ALSGTSPDDVQPGPSVGPPSK 21 0 A0A075B797;M0R3B2;Q9Y314 A0A075B797 NOSIP Nitric oxide synthase-interacting protein 1 ALS(0.001)GT(0.133)S(0.866)PDDVQPGPSVGPPSK 321.6 4.962e-54 882240000.0 957740.0 1012400.0 777540.0 631120.0 738080.0 999790.0 732080.0 905210.0 1100800.0 1008900.0 True False 904612.2529926432 963762.7843566197 827661.4725079874 691101.4550468526 796162.6968992582 993549.9397567308 806085.7908122789 902070.0377876019 900922.4689097854 999961.9309123222 0.9046466920668809 0.9637994753233495 0.8276929820246903 0.6911277656503596 0.7961930072406592 0.993587764736462 0.8061164789311938 0.9021043800783416 0.9009567675119616 1.0 19.931513646194727 -6.234095153852701 24.977410437263366 0.9072823450368273 0.8351666686124265 0.19242627675380952 0.08369135854085466 1594.9446093029317 1456892.9041333564 0.029967189257310227 0.02995999180651147 5.83317285546176e-07 6.234095153852701 -0.07211567642440075 ALSGVLEQDRVQS(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 2 ALSGVLEQDRVQSLK 15 1 Q9Y450-2;E9PJ90;E9PN23;G5E991;E9PLR4;Q9Y450-4;Q9Y450;E9PMN1 Q9Y450-2 HBS1L HBS1-like protein 1 ALSGVLEQDRVQS(1)LK;ALSGVLEQDRVQS(1)LK 142.43 6.7696e-06 1279930000.0 328110.0 407280.0 355860.0 374670.0 377680.0 409540.0 389240.0 354470.0 549730.0 449600.0 True False 309909.08422893065 387713.6574602567 378799.30499613174 410278.52415135707 407401.267294754 406983.90894885047 428588.1778163198 353240.4263039201 449912.8895655666 445616.89378350734 0.6954608062491742 0.8700605001044203 0.8500559792065752 0.9206978682246311 0.9142410733931475 0.913304487837874 0.9617861975056525 0.792699808359451 1.0096405586098502 1.0 18.765444402167915 -3.408118430736544 0.8659254237915684 0.922512651985939 2.637551850531603e-13 0.5779304359864783 0.059140575396813 6.184816798005429 1.2213863123413546 0.019015242509231933 7.690550554767305 0.0003907343292426886 3.408118430736544 -0.9225126519856752 ALSIES(ph)LSPTDSSNGVNWR ddPTM_KYSE-520_SHP099_60min_R1 1 ALSIESLSPTDSSNGVNWR 19 0 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 ALS(0.381)IES(0.619)LSPTDSSNGVNWR 213.02 1.5087e-18 429510000.0 104060.0 101280.0 80387.0 52696.0 80278.0 104260.0 88025.0 95308.0 118400.0 111280.0 True False 98287.58436153283 96414.35677562078 85568.87464374764 57704.21199636985 86595.4218806615 103609.27466671662 96923.42604121256 94977.39879305441 96901.54462111072 110294.14577453003 0.8911405376170941 0.8741566118361064 0.7758242655840747 0.5231847220099269 0.7851316248251752 0.9393905174126012 0.8787721720004006 0.8611281961167092 0.8785737805087382 1.0 16.750996691601866 -6.178385398573139 6.115181745476346 0.9005377515328993 0.7609146306217296 0.3294494201256517 0.10035562858595864 0.32756370517112204 19.469311305346004 0.0363902464934788 0.03636780421460543 6.631543174385102e-07 6.178385398573139 -0.13962312091116968 ALSIESLS(ph)PTDSSNGVNWR ddPTM_KYSE-520_SHP099_60min_R1 1 ALSIESLSPTDSSNGVNWR 19 0 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 ALSIESLS(0.936)PT(0.064)DSSNGVNWR 211.17 3.8134e-15 0.0 165180.0 141260.0 115360.0 110080.0 114500.0 150900.0 124640.0 143200.0 183200.0 147620.0 True False 156017.13612183358 134473.6575644172 122796.29018252603 120541.97010324127 123510.49858411691 149958.1771264871 137239.82756917633 142703.2726231313 149935.4980961779 146312.20164662212 1.066330315352995 0.9190871031330814 0.8392758006547365 0.823868199279634 0.8441572007946636 1.0249191484977505 0.9379930451777516 0.9753340529164669 1.0247641441300082 1.0 17.158690561897107 -6.26540846359463 24.91331662579228 0.9876473922332804 0.8922437199085297 0.31981482871313693 0.06808556164078068 442.5386730071294 2777734.851800549 0.02526277449918577 0.023084435698326487 5.427396327036015e-07 6.26540846359463 -0.09540367232475067 ALSS(ph)DSILSPAPDAR ddPTM_KYSE-520_SHP099_60min_R1 1 ALSSDSILSPAPDAR 15 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 ALS(0.317)S(0.678)DS(0.005)ILSPAPDAR 326.89 1.7333999999999998e-43 3096000000.0 1335900.0 1281600.0 899410.0 752250.0 767080.0 1157300.0 834130.0 1034200.0 1437500.0 1193800.0 True False 1261794.9639493742 1220030.012279182 957387.4077068813 823743.613827791 827444.8319118283 1150076.8614213616 918452.0007243018 1030612.601584094 1176486.2364260675 1183223.8607623447 1.0664042585622018 1.031106667755266 0.8091346358499243 0.6961857693581817 0.6993138486733271 0.9719858596160944 0.7762284307996867 0.8710208065953605 0.9943057061645663 1.0 20.17429162039679 -9.881751108235004 19.932055708093337 0.9999999999999982 0.8706480579046932 0.07081383913638717 0.1273262058630703 0.0 0.0 0.1329334632286994 0.032241100592417 1.3129521290508878e-10 9.881751108235004 -0.12935194209530498 ALSSGGSIT(ph)SPPLS(ph)PALPK ddPTM_KYSE-520_SHP099_60min_R1 1 ALSSGGSITSPPLSPALPK 19 0 I1E4Y6;Q6Y7W6;Q6Y7W6-3;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 2 ALSSGGS(0.001)IT(0.5)S(0.5)PPLS(0.999)PALPK 127.91 5.3713999999999994e-05 0.0 95656.0 114200.0 88158.0 96037.0 127940.0 124150.0 135550.0 145840.0 188620.0 147160.0 True False 90349.77099449156 108713.66058230541 93840.80573778723 105164.32760542314 138008.15012097746 123375.13379889565 149252.71684051547 145334.1150793118 154371.36272325902 145856.27688874752 0.6194438314328167 0.745347837619818 0.6433785897974393 0.7210133828223084 0.9461927389401537 0.8458678394279907 1.0232862103998348 0.9964200251057141 1.0583799752478695 1.0 17.1541879480326 -5.953184609732194 0.8881437366683663 1.025301923319462 0.6511190116886133 0.8659236360622993 0.05779261957522051 0.19755659812512358 0.34179384003026986 0.030828364861082543 0.03998098166184924 1.1138209703559223e-06 5.953184609732194 -0.3741829116308487 ALSSGGSIT(ph)SPPLSPALPK ddPTM_KYSE-520_SHP099_60min_R1 1 ALSSGGSITSPPLSPALPK 19 0 I1E4Y6;Q6Y7W6;Q6Y7W6-3;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSSGGSIT(0.747)S(0.253)PPLSPALPK 180.74 6.8049999999999996e-09 739230000.0 946520.0 1359900.0 937520.0 894450.0 985670.0 1533300.0 1090300.0 1505300.0 1807400.0 1539500.0 True False 894014.6487591583 1294568.3627484862 997954.039285036 979458.2590738022 1063236.6213048617 1523730.105951243 1200518.1643025735 1500078.4656396608 1479221.7208462444 1525861.2277128743 0.5859082284299235 0.8484181518190387 0.6540267366127898 0.641905201655802 0.6968108252534575 0.9986033318607711 0.7867806996459566 0.98310281328017 0.969433978647889 1.0 20.541192328879166 -6.251049800432317 23.94030080410152 0.9364778725194918 0.6903087213265922 0.7004689881482894 0.08553565850990444 237.46019485511766 547170.1209103598 0.027886382125160727 0.027567689936623455 5.609836444993255e-07 6.251049800432317 -0.24616915119289962 ALSSGGSITS(ph)PPLS(ph)PALPK ddPTM_KYSE-520_SHP099_60min_R1 10 ALSSGGSITSPPLSPALPK 19 0 I1E4Y6;Q6Y7W6;Q6Y7W6-3;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 2 ALSSGGS(0.003)IT(0.388)S(0.609)PPLS(1)PALPK;ALSS(0.001)GGS(0.004)IT(0.246)S(0.751)PPLS(0.999)PALPK;ALSSGGSIT(0.014)S(0.986)PPLS(1)PALPK;ALSSGGSIT(0.029)S(0.971)PPLS(1)PALPK;ALSSGGSIT(0.123)S(0.877)PPLS(1)PALPK;ALSSGGSIT(0.019)S(0.981)PPLS(1)PALPK;ALSSGGSIT(0.005)S(0.995)PPLS(1)PALPK;ALSSGGSIT(0.001)S(0.999)PPLS(1)PALPK;ALSSGGSIT(0.001)S(0.999)PPLS(1)PALPK;ALSSGGSIT(0.011)S(0.989)PPLS(1)PALPK 319.35 1.5742999999999997e-53 21749410000.0 4130060.0 3813660.0 3846520.0 3967690.0 4679850.0 7072620.0 7939880.0 9047020.0 10559050.0 8862820.0 True False 3900957.338729504 3630446.0491796383 4094472.833849599 4344778.064670502 5048127.570295892 7028477.155124811 8742520.556161353 9015637.999210352 8641792.691989332 8784302.30996962 0.444082774143846 0.41328792214486 0.46611246851131644 0.49460707422824657 0.5746759836084637 0.8001178587795117 0.9952435888094553 1.0263351238467944 0.9837767857990783 1.0 23.066496274576785 -6.339086759910943 1.4540980243625212 1.0165732604626883 0.443968628816006 0.9925544599564442 0.021667960297492694 0.032227248578662084 0.1367242700307578 0.010819970411301129 0.00919915872809056 4.5805037189934244e-07 6.339086759910943 -0.5726046316466822 down ALSSGGSITS(ph)PPLSPALPK ddPTM_KYSE-520_SHP099_60min_R1 6 ALSSGGSITSPPLSPALPK 19 0 I1E4Y6;Q6Y7W6;Q6Y7W6-3;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSSGGSIT(0.001)S(0.999)PPLSPALPK;ALSSGGS(0.005)IT(0.057)S(0.92)PPLS(0.017)PALPK;ALSSGGSITS(1)PPLSPALPK;ALSSGGSITS(1)PPLSPALPK;ALSSGGSIT(0.002)S(0.998)PPLSPALPK;ALSSGGSIT(0.129)S(0.871)PPLSPALPK 330.28 2.8726e-55 20834160000.0 4965130.0 7127480.0 4746410.0 4261700.0 4474180.0 6860790.0 5296240.0 7329930.0 8386120.0 7366440.0 True False 4689704.341158737 6785065.162234409 5052371.183124517 4666730.686673172 4826272.511398119 6817969.264729167 5831635.625521289 7304504.183648516 6863412.004881662 7301179.072603603 0.6423215065024268 0.9293108818127991 0.6919938728913877 0.6391749387690355 0.6610264538652205 0.9338175652083928 0.7987251877444674 1.0004554211055294 0.9400415928210027 1.0 22.799698033979762 -6.759626559578399 1.280978141223778 0.9752895606057593 0.7248508779127065 0.5517823219116201 0.09713837056188196 0.37189535780718497 1.2275294308941833 0.06351927919900552 0.036691364191753534 1.7392957686961148e-07 6.759626559578399 -0.2504386826930528 ALSSGGSITSPPLS(ph)PALPK ddPTM_KYSE-520_SHP099_60min_R1 1 ALSSGGSITSPPLSPALPK 19 0 I1E4Y6;Q6Y7W6;Q6Y7W6-3;C9JW88;F8WCD5;C9JPV7;C9JXQ0;C9J0V6;C9JHT0;C9JRZ2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 ALSSGGSIT(0.005)S(0.002)PPLS(0.993)PALPK 132.47 7.0918e-06 35218000.0 106110.0 113360.0 102240.0 100640.0 121150.0 157740.0 121720.0 143610.0 169850.0 153600.0 True False 100223.86677495911 107914.01544317104 108830.55398978377 110204.79534148055 130683.81575079288 156755.48614931788 134024.64547272256 143111.85042882612 139009.52157006465 152239.22349899178 0.6583314370072497 0.7088450201132674 0.7148654038589767 0.7238922585690303 0.8584109452690315 1.0296655654602442 0.8803555509044629 0.9400458511257047 0.9130992550745981 1.0 17.215980582668145 -5.855602482687718 2.9237523061147357 0.9449656671158143 0.6989090414646888 0.8848628833598362 0.0426735902197438 0.08147903149275341 1.4054044647481325 0.013664602187158316 0.016159744378491225 1.394432567435836e-06 5.855602482687718 -0.24605662565112552 ALSSLHGDDQDS(ph)EDEVLTIPEVK ddPTM_KYSE-520_SHP099_60min_R1 6 ALSSLHGDDQDSEDEVLTIPEVK 23 0 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 1 ALS(0.001)S(0.001)LHGDDQDS(0.997)EDEVLTIPEVK;ALS(0.001)SLHGDDQDS(0.999)EDEVLTIPEVK;ALSSLHGDDQDS(1)EDEVLTIPEVK;ALS(0.007)S(0.037)LHGDDQDS(0.956)EDEVLTIPEVK;ALSSLHGDDQDS(1)EDEVLTIPEVK;ALS(0.147)S(0.147)LHGDDQDS(0.707)EDEVLTIPEVK 187.75 3.6273e-15 2817030000.0 1374620.0 2918590.0 3447690.0 8970040.0 1919970.0 2306270.0 1815280.0 1455420.0 2491630.0 2062440.0 True False 1298367.088362967 2778376.555507094 3669933.6138990372 9822549.904659124 2071060.71586504 2291875.713462578 1998786.2178255336 1450371.4877175814 2039212.800880892 2044168.386154041 0.6351566226918093 1.3591720595652172 1.7953186433940305 4.80515693872928 1.0131556333094434 1.1211775551301726 0.9777992025334612 0.7095166413596452 0.9975757450772084 1.0 20.963082610934137 -5.947306256193293 24.999998895416972 0.9577314416885354 2.1723251723321795 0.2465829566930533 1.0094624532639347 148.56651540369916 70484.96763537535 0.3307600710705682 0.37504665560977446 1.1289994849682086e-06 5.947306256193293 1.214593730643644 ALSTCAS(ph)HFLSVS(ph)IFCDS(ph)LLFMY(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 1 ALSTCASHFLSVSIFCDSLLFMYAR 25 0 A6NET4 A6NET4 OR5K3 Olfactory receptor 5K3 4 ALS(0.311)T(0.311)CAS(0.353)HFLS(0.025)VS(1)IFCDS(1)LLFMY(1)AR 50.751999999999995 0.063674 0.0 41890.0 35558.0 35818.0 35691.0 39945.0 41335.0 33667.0 37536.0 48472.0 35094.0 True False 39566.27819435529 33849.74030635387 38126.88559082627 39083.06190910957 43088.44424403977 41077.01293256029 37070.38891825624 37405.796376968276 39670.706679683026 34783.094462718866 1.1375146117825465 0.9731664427566852 1.096132652363387 1.1236223375984988 1.2387754715217394 1.1809476289289718 1.065758797222281 1.0754016269903894 1.140516888806509 1.0 15.086098666634078 -3.9135008948900167 21.680237080472235 1.1051260361431015 3.5698316164363004 0.017681134116789954 0.07495647427302449 9273.239389307682 1905691.1084704685 0.01912635718789852 202773.02913557098 0.00012203913060517145 3.9135008948900167 2.4647055802931988 ALSYAS(ph)LDKEDLLSPINQNTLQR ddPTM_KYSE-520_SHP099_60min_R1 2 ALSYASLDKEDLLSPINQNTLQR 23 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 ALSYAS(1)LDKEDLLSPINQNTLQR;ALSYAS(1)LDKEDLLSPINQNTLQR 354.52 4.1404e-74 2540200000.0 804310.0 1089430.0 848080.0 746160.0 867990.0 1203660.0 707100.0 948390.0 1246720.0 1008690.0 True False 759693.3209477658 1037092.1475322309 902748.5937759768 817074.8220588159 936295.8748124695 1196147.5114649946 778580.5686309726 945100.2564458911 1020347.0752536395 999753.7913489462 0.7598804100784935 1.0373475514735533 0.9029709130264139 0.8172760424907761 0.9365264557278105 1.1964420858570175 0.7787723091106769 0.945333005609999 1.0205983553979898 1.0 19.931213321589947 -5.999851221466009 24.99981876756814 0.982250613951779 0.8904090972681207 0.16024588357466152 0.11600206781893763 11.984381079140679 2013084.837498918 0.03621309974865203 0.04066952315258109 1.0003426339201227e-06 5.999851221466009 -0.09184151668365836 ALT(ph)TPTHYK ddPTM_KYSE-520_SHP099_60min_R1 1 ALTTPTHYK 9 0 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ALT(0.563)T(0.437)PTHYK 81.865 0.01168 916270000.0 1542100.0 1413900.0 1077300.0 1032600.0 1009200.0 1180800.0 1102900.0 1372800.0 1461200.0 1397000.0 True False 1456556.6388998656 1345974.121692832 1146744.4817409443 1130737.9935374905 1088618.2984374757 1173430.18920448 1214391.8952667236 1368038.0772139272 1195882.9138544493 1384623.6668495524 1.051951280172744 0.9720866065761681 0.8281993939552854 0.8166392216234969 0.7862196237873208 0.8474722896181581 0.8770555670407116 0.9880215902467111 0.8636880493133945 1.0 20.401062482243812 -9.664522580869825 13.017929673558008 1.0000002395335525 0.888520445877936 0.1361601817091731 0.0808068431179555 0.0 0.0 0.0852712968682399 0.02068132728359727 2.1650973035018223e-10 9.664522580869825 -0.11147979365561655 ALTHNGT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 ALTHNGTPR 9 0 Q9HB90 Q9HB90 RRAGC Ras-related GTP-binding protein C 1 ALTHNGT(1)PR;ALT(0.001)HNGT(0.999)PR;ALTHNGT(1)PR 85.92399999999999 0.016641 991460000.0 1361920.0 1409200.0 1320540.0 1280880.0 1324040.0 1352910.0 1239520.0 1152140.0 1370400.0 1377170.0 True False 1286371.5826797895 1341499.9167476748 1405664.121338707 1402614.4500893864 1428234.4152429176 1344465.9868535162 1364822.7781494323 1148143.4952514966 1121569.904972719 1364969.3452220487 0.9424179284191374 0.9828058933656448 1.0298136923434262 1.0275794507760274 1.0463490775395965 0.984978887298603 0.9998926224437718 0.8411496560493967 0.8216813871305408 1.0 20.38043712047462 -7.2508526313543085 23.770993146613915 0.8735616432683981 1.0043476915953258 0.49502354324689024 0.05232155261712431 252.1580777496415 566186.5185795525 0.024512881014759857 0.013937296378186569 5.612383880994721e-08 7.2508526313543085 0.13078604832692764 ALTT(ph)PTHYK ddPTM_KYSE-520_SHP099_60min_R1 2 ALTTPTHYK 9 0 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ALT(0.21)T(0.785)PT(0.005)HYK;ALT(0.176)T(0.796)PT(0.028)HYK 76.332 0.020744 1890610000.0 3473200.0 3627800.0 3054800.0 2503670.0 2498500.0 3586400.0 2760800.0 3291100.0 3682000.0 3727500.0 True False 3280534.672347451 3453515.0425611846 3251717.2958528143 2741618.044044168 2695117.73547962 3564015.9472924666 3039888.6068114717 3279683.9422485116 3013441.6156666307 3694477.249951117 0.8879563874404307 0.9347777260252121 0.880156264569186 0.7420855126609437 0.7294990747379159 0.9646874797617506 0.8228196849369402 0.8877261166764273 0.8156611644330743 1.0 21.816938814005155 -10.502493556294517 3.0625235011714844 1.004422926595688 0.8517017673966941 0.2750236264657421 0.07222985353657066 35463971.58389038 46929361.53962654 1348421.4808230319 0.018738079310002532 3.144173070575105e-11 10.502493556294517 -0.15272115919899398 ALTT(ph)PTHYKLT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 ALTTPTHYKLTPR 13 1 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;P52948-4;P52948-3;H0YEN4;H0YCR0 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 2 ALT(0.418)T(0.582)PT(0.001)HYKLT(0.999)PR;ALT(0.132)T(0.866)PT(0.017)HYKLT(0.984)PR 89.98200000000001 0.00228 2283000000.0 2650900.0 2377260.0 2328800.0 2290260.0 2030720.0 2203020.0 2124840.0 2271740.0 2951500.0 2339630.0 True False 2503849.292561864 2263052.8612599922 2478918.174211744 2507925.6218082197 2190526.1107837385 2189270.135011225 2339639.563639989 2263859.864168101 2415582.0012602 2318902.6984045967 1.0797560821696013 0.9759154029261214 1.0690048253931648 1.081513952066066 0.9446390796348717 0.9440974545923989 1.0089425335740303 0.9762634136074941 1.0416918324870288 1.0 21.145010854821574 -4.246667578359594 23.775072117877322 1.0047083366820784 1.0797561882597775 0.1994731047987489 0.04512334136451311 2394.84349631838 3854347.943404615 0.012016662170050683 0.2426146321331913 5.6667287099240945e-05 4.246667578359594 0.07504785157769911 ALTVPELTQQMFDAK ddPTM_KYSE-520_SHP099_60min_R1 1 ALTVPELTQQMFDAK 15 0 P04350;A0A0B4J269;Q13509;Q13509-2;P68371 P04350;A0A0B4J269;P68371 TUBB4A;TUBB3;TUBB4B Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta-4B chain 0 194.7 2.6191000000000003e-10 265030000.0 99197.0 132240.0 122090.0 91815.0 154700.0 131870.0 108250.0 108700.0 112880.0 133480.0 False True 93694.34466568308 125886.99190371338 129960.11675090692 100541.06999481354 166874.009877405 131046.95041530729 119192.96641819096 108322.94507077071 92383.8374732346 132297.47104586865 0.708209642444325 0.9515449608259503 0.9823325852226507 0.7599621459124877 1.2613544957299176 0.990547660354537 0.9009466732502072 0.8187831877240815 0.6983038809653764 1.0 17.013425958241946 -7.101902835806117 3.718830990466903 0.8199912195281978 0.9504960950136003 0.0752120014041775 0.1554696067345801 0.5516318293982092 13.778570670240235 0.07927840770976921 0.04392086033546649 7.908555453897742e-08 7.101902835806117 0.13050487548540257 ALTVPELTQQVFDAK ddPTM_KYSE-520_SHP099_60min_R1 2 ALTVPELTQQVFDAK 15 0 Q5JP53;P07437;Q5ST81 Q5JP53 TUBB Tubulin beta chain 0 ; 178.15 9.3061e-08 434670000.0 206439.0 261160.0 203696.0 163595.0 205473.0 256780.0 199641.0 178617.0 203402.0 201337.0 False True 194987.41714405603 248613.48159084842 216826.57008512353 179143.0196133696 221642.55611855234 255177.34077229534 219822.660588398 177997.41931652118 166469.32414715487 199553.3108178156 0.9771194291137166 1.2458499464227022 1.0865596225716232 0.8977201073698056 1.11069345434666 1.2787427065304986 1.1015736080123848 0.891979284067233 0.834209783164835 1.0 17.606414689446456 -7.259901733370784 22.258108144095303 0.8973208510201747 1.1043978113378006 0.3798089981442302 0.11146329851698639 30.504493438227072 441604.4145932359 0.057982296711885296 0.031113025100929254 5.496652310424179e-08 7.259901733370784 0.2070769603176259 ALVAT(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 6 ALVATPGK 8 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 ALVAT(1)PGK;ALVAT(1)PGK;ALVAT(1)PGK;ALVAT(1)PGK;ALVAT(1)PGK;ALVAT(1)PGK 110.38 0.0051357 12146660000.0 36530300.0 50378400.0 35155150.0 30597080.0 33224440.0 42202390.0 31187990.0 43096720.0 48163100.0 48548200.0 True False 34503891.43765237 47958146.04447993 37421307.219228834 33505017.28385246 35839014.406795405 41938989.22982833 34340776.39465012 42947227.537170105 39417895.13294776 48118100.71792808 0.7170667778413943 0.9966757899613324 0.7776970965374412 0.6963079752515875 0.7448135706121569 0.8715844682997326 0.7136768883701027 0.89253787860269 0.8191905861791682 1.0 25.52007636285805 -8.460700059176892 0.9025401789477857 1.0000976746754031 0.7959824459397479 0.3164083064788994 0.08908414412907775 1.9754544480374023 2.593200446035253 0.08888134912159865 0.029039038797873947 3.4617837966734836e-09 8.460700059176892 -0.20411522873565524 ALVAT(ph)PGKK ddPTM_KYSE-520_SHP099_60min_R1 7 ALVATPGKK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 ALVAT(1)PGKK;ALVAT(1)PGKK;ALVAT(1)PGKK;ALVAT(1)PGKK;ALVAT(1)PGKK;ALVAT(1)PGKK;ALVAT(1)PGKK 134.3 0.00059221 86044500000.0 115953980.0 149783900.0 111511200.0 86965130.0 93648960.0 111002060.0 99361040.0 114869160.0 141393140.0 133497670.0 True False 109521781.58087161 142588056.61378232 118699390.37622833 95230269.8081803 101018600.36230576 110309254.96941645 109405423.59350145 114470705.69462344 115719710.0070011 132314984.50341552 0.8277352863087435 1.077641033242925 0.8970971112736236 0.7197239992551415 0.7634705981445217 0.833686792039559 0.8268558848727924 0.8651378838476798 0.8745775124510857 1.0 26.979401213342943 -5.000984412069897 24.99804931988125 0.8290896225622373 0.961358402816828 0.19487004493050875 0.08958157693772871 46.2951762557284 1175749.0938716622 0.02258792811133821 0.04610422799110943 9.97735874450161e-06 5.000984412069897 0.13226878025459077 ALVATPGK ddPTM_KYSE-520_SHP099_60min_R1 1 ALVATPGK 8 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 98.29899999999999 0.036273 0.0 351810.0 358990.0 403220.0 268320.0 408890.0 353140.0 436280.0 351590.0 579100.0 429380.0 False True 332294.39798415237 341743.5815450244 429212.2063748108 293821.0521266507 441067.3167341448 350935.9222693679 480383.44008247874 350370.4163517227 473950.037923017 425576.02725258475 0.7808108932482972 0.8030141729345937 1.0085441352176256 0.6904079020227899 1.0364007568320237 0.8246139345181748 1.12878406987282 0.8232851333606097 1.113667141879967 1.0 18.69905736038425 -5.62762386023159 0.40662801937388565 1.0231344913253875 0.7584331516907729 0.2546369325288076 0.12603107994512985 2.8821797805655702 0.7982602586656284 0.1134297279624338 0.3348833141274924 2.3570898610732097e-06 5.62762386023159 -0.2647013396346146 ALVATPGKK ddPTM_KYSE-520_SHP099_60min_R1 1 ALVATPGKK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 103.7 0.030604000000000003 0.0 524460.0 543320.0 439460.0 452440.0 487810.0 442220.0 380530.0 478610.0 609190.0 417620.0 False True 495367.15831490955 517218.0916600538 467788.2947608614 495439.7615689544 526197.8717407688 439459.94094682013 418997.6860149125 476949.8136184137 498576.45243018836 413920.2117034439 1.1967696776059318 1.249559883851766 1.1301412241642639 1.1969450815895788 1.2712543549764297 1.0617020588056578 1.0122667948264057 1.1522747624610508 1.2045230900379347 1.0 18.658993171452444 -6.272614809325788 24.97058702456022 1.0910526014842765 1.2061476040921488 0.4599978410543307 0.06637474037005558 754.3724108537128 1685578.6323810306 0.0241835475590641 0.021521572709056042 5.338081383387998e-07 6.272614809325788 0.11509500260787231 ALVEFESNPEETREPGS(ph)PPSVQR ddPTM_KYSE-520_SHP099_60min_R1 13 ALVEFESNPEETREPGSPPSVQR 23 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 ALVEFES(0.004)NPEET(0.277)REPGS(0.672)PPS(0.046)VQR;ALVEFESNPEETREPGS(0.999)PPS(0.001)VQR;ALVEFESNPEETREPGS(1)PPSVQR;ALVEFESNPEETREPGS(0.999)PPS(0.001)VQR;ALVEFESNPEETREPGS(0.999)PPS(0.001)VQR;ALVEFESNPEETREPGS(0.999)PPS(0.001)VQR;ALVEFESNPEET(0.001)REPGS(0.995)PPS(0.004)VQR;ALVEFESNPEET(0.005)REPGS(0.934)PPS(0.061)VQR;ALVEFESNPEETREPGS(0.999)PPS(0.001)VQR;ALVEFESNPEETREPGS(1)PPSVQR;ALVEFESNPEET(0.001)REPGS(0.997)PPS(0.001)VQR;ALVEFESNPEETREPGS(0.999)PPS(0.001)VQR;ALVEFESNPEETREPGS(1)PPSVQR 288.98 2.0297999999999997e-48 265542100000.0 10099280.0 9970160.0 9086560.0 7579510.0 8071600.0 8887570.0 7880570.0 9830590.0 11431970.0 9181380.0 True False 9539052.805984447 9491178.548084741 9672294.196610047 8299864.351537218 8706788.998878246 8832099.378953297 8677214.922551537 9796489.977766953 9356212.4245118 9100040.11620556 1.0482429400500206 1.0429820557804612 1.0628847865610398 0.9120689849220147 0.9567857820069383 0.970556092739074 0.9535358978362033 1.0765326144355276 1.0281506790118478 1.0 23.11744147456114 -10.363787079479792 13.49323511114935 0.9999999513032833 1.0038401680678402 0.0 0.05209565028414387 3.9478378207473166e-11 1.6874696587133618e-18 0.05491458010514585 0.013318742009409322 4.327259305482739e-11 10.363787079479792 0.003840216764556814 ALVHQLS(ph)NESR ddPTM_KYSE-520_SHP099_60min_R1 4 ALVHQLSNESR 11 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5;Q9H4L5-6 OSBPL3 Oxysterol-binding protein-related protein 3 1 ALVHQLS(1)NESR;ALVHQLS(0.988)NES(0.012)R;ALVHQLS(1)NESR;ALVHQLS(1)NESR 176.87 4.4709e-06 2323160000.0 1264087.0 1150251.0 1031208.0 1326845.0 1184985.0 1213517.0 1218792.0 1033483.0 1272874.0 1084286.0 True False 1193965.574215038 1094991.2153980504 1097681.317671138 1452947.9498695051 1278236.5778576413 1205942.9902717252 1341999.3896236473 1029898.088689745 1041752.1681423266 1074680.0696017426 1.1109962936760338 1.0188997138504996 1.0214028795359715 1.3519818511270447 1.1894112620245514 1.1221413929436939 1.2487431632755306 0.9583299419253277 0.9693602753128022 1.0 20.03547580523632 -7.279805723810916 24.55371280742678 0.972883792486138 1.1497910298628164 0.42191942532156357 0.0943861918631638 721.0927997415864 964012.9382787722 0.05560454210246613 0.026794039024642984 5.250422788020589e-08 7.279805723810916 0.17690723737667846 ALVLDCHYPEDEVGQEDEAESDIFSIR ddPTM_KYSE-520_SHP099_60min_R1 2 ALVLDCHYPEDEVGQEDEAESDIFSIR 27 0 Q07021;I3L3Q7;I3L3B0 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial 0 ; 192.47 1.7477e-16 144480000.0 126142.0 120552.0 75946.0 110478.0 86847.0 114328.0 110501.0 140302.0 119636.0 97235.0 False True 119144.65180215724 114760.50096775887 80841.60067789636 120977.79590357798 93681.36480816422 113614.43654418172 121671.51946583382 139815.325108733 97913.11817813497 96373.57354768529 1.2362792767376725 1.1907880629846708 0.8388357689973615 1.2553005087407971 0.9720648654977085 1.178896167920615 1.262498784541088 1.4507641458324974 1.0159747591977373 1.0 16.556349981000878 -6.5097860941578976 23.36075688376388 1.2199909021384332 1.0957845306013811 0.039366984761013635 0.1675174043016473 607.661604787771 1084236.5680978864 0.05910503418315313 0.049712296170283075 3.091817890413337e-07 6.5097860941578976 -0.12420637153705205 ALVVPEPEPDS(ph)DSNQER ddPTM_KYSE-520_SHP099_60min_R1 1 ALVVPEPEPDSDSNQER 17 0 Q5VTR2;C9J0A5;C9JXC9 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A 1 ALVVPEPEPDS(0.739)DS(0.261)NQER 153.09 3.6069e-06 2104300000.0 1297100.0 1205100.0 1180400.0 1001700.0 1100900.0 970600.0 1091800.0 1286000.0 1329300.0 1159800.0 True False 1225147.2772952544 1147205.1871080215 1256490.4727067773 1096901.2668279128 1187534.5667358444 964542.1253742097 1202169.7989411622 1281539.1661546563 1087932.6289260334 1149525.074310746 1.0657856054421877 0.9979818733365903 1.0930518183434734 0.9542212617550893 1.0330653878497507 0.8390788047425134 1.0457969345835991 1.114842289910958 0.9464192241116242 1.0 20.13260650487938 -5.266245474349784 24.96402885852239 0.9930439650561188 1.0468439756016132 0.13265610356147328 0.07178830382145926 965.6982884562697 5016063.991460646 0.020581275598427217 0.03177923883288726 5.416946241976855e-06 5.266245474349784 0.05380001054549444 ALVVPEPEPDSDS(ph)NQER ddPTM_KYSE-520_SHP099_60min_R1 7 ALVVPEPEPDSDSNQER 17 0 Q5VTR2;C9J0A5;C9JXC9 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A 1 ALVVPEPEPDS(0.484)DS(0.516)NQER;ALVVPEPEPDS(0.007)DS(0.993)NQER;ALVVPEPEPDS(0.004)DS(0.996)NQER;ALVVPEPEPDS(0.002)DS(0.998)NQER;ALVVPEPEPDS(0.004)DS(0.996)NQER;ALVVPEPEPDS(0.002)DS(0.998)NQER;ALVVPEPEPDS(0.007)DS(0.993)NQER 285.9 1.7960999999999998e-37 14369890000.0 6573390.0 6473740.0 6147630.0 4886310.0 5564810.0 5845150.0 5703470.0 6552190.0 7505750.0 5657170.0 True False 6208750.952971906 6162731.813118156 6543916.066355777 5350703.433277329 6002728.887562272 5808668.250701703 6280032.408103089 6529461.982182639 6142895.004559979 5607051.875011657 1.1073111309424077 1.0991037626355729 1.1670867707715245 0.9542810647290837 1.0705677460046314 1.0359576440854004 1.120023953423836 1.1645089304919376 1.095565930455603 1.0 22.418810986636135 -10.140733039262754 13.699023795482807 0.9999999999998436 1.089845608022411 0.1758195864148755 0.05876079943484653 0.0 0.0 0.059319960020017576 0.01438720347339223 7.232142266453945e-11 10.140733039262754 0.08984560802256747 ALVVPEPEPDSDS(ph)NQERK ddPTM_KYSE-520_SHP099_60min_R1 4 ALVVPEPEPDSDSNQERK 18 1 Q5VTR2;C9J0A5;C9JXC9 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A 1 ALVVPEPEPDSDS(1)NQERK;ALVVPEPEPDS(0.03)DS(0.97)NQERK;ALVVPEPEPDS(0.077)DS(0.923)NQERK;ALVVPEPEPDS(0.028)DS(0.972)NQERK 222.06 1.2304e-18 4904100000.0 5943600.0 5221440.0 4697710.0 5058380.0 5043030.0 5000520.0 4792500.0 5578800.0 6173500.0 5133990.0 True False 5613896.65972714 4970594.18485878 5000531.90320176 5539126.914342598 5439887.770084363 4969309.899831292 5276972.670292653 5559448.444901702 5052548.021270487 5088506.842783774 1.1032502919178429 0.9768276507101075 0.982711050156732 1.0885564440574287 1.069053838023014 0.9765752613418374 1.0370375501756768 1.0925500577415534 0.9929333255070136 1.0 22.27881094732709 ALYDYAGQEADELS(ph)FR ddPTM_KYSE-520_SHP099_60min_R1 2 ALYDYAGQEADELSFR 16 0 A0A0C4DGG1;Q9UKS6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 ALYDYAGQEADELS(1)FR;ALYDYAGQEADELS(1)FR 188.6 2.4107e-09 0.0 183950.0 156113.0 153692.0 123526.0 130521.0 117994.0 124632.0 147489.0 190804.0 149389.0 True False 173745.92680476612 148613.09714960968 163599.23223589465 135265.8739005538 140792.26013709622 117257.55567834807 137231.01885110367 146977.39508319154 156158.80337741895 148065.5296828834 1.1734394033296152 1.0036981427608371 1.1049109984361671 0.9135541147913154 0.9508780364925951 0.7919301401851077 0.9268262447378242 0.9926509930972971 1.0546600799785686 1.0 17.17587628829913 -5.259940440127626 24.99164599603597 0.9397410081642656 1.0849843843655107 0.4378410954042641 0.0756904574902855 133.30758611033136 2222603.5174342184 0.02182604749686831 0.03533463528207203 5.4961624398121875e-06 5.259940440127626 0.14524337620124506 AMADELS(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 14 AMADELSEK 9 0 Q03135;E9PCT5 Q03135 CAV1 Caveolin-1;Caveolin 1 AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK;AMADELS(1)EK 158.3 0.00015849 19189450000.0 41918840.0 48758650.0 37048910.0 45702710.0 46252740.0 43710000.0 43448770.0 51385270.0 63169560.0 37973700.0 True False 39593518.38206418 46416211.26577421 39437142.018951885 50046281.81737917 49892567.49590852 43437189.67659873 47840995.69073166 51207026.49178218 51699560.279019654 37637282.56109152 1.0519760112276269 1.2332508647624345 1.0478211851490313 1.3296996598026385 1.3256155625721557 1.1541000497603142 1.271106531484515 1.3605399488835233 1.3736262758902091 1.0 25.165659132417122 -5.265834672886589 24.997463968556467 1.2731427582641548 1.1232395037199125 0.2467632625605225 0.11633506899768029 494.65129710105435 2813245.671889769 0.03134369024815727 0.04836404134569008 5.422072584409259e-06 5.265834672886589 -0.14990325454424225 AMDNHS(ph)DS(ph)EEELAAFCPQLDDSTVAR ddPTM_KYSE-520_SHP099_60min_R1 6 AMDNHSDSEEELAAFCPQLDDSTVAR 26 0 K7EQI9;Q86VR2-2;Q86VR2 K7EQI9 FAM134C Protein FAM134C 2 AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR;AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR;AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR;AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR;AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR;AMDNHS(1)DS(1)EEELAAFCPQLDDSTVAR 179.2 7.0807e-12 1686400000.0 832869.0 784916.0 712386.0 848997.0 751987.0 810757.0 780254.0 857714.0 975004.0 716661.0 True False 786668.0962868099 747207.4571770636 758307.5414179014 929685.4196197437 811164.0986792524 805696.7648279604 859129.6888652119 854738.7903259534 797967.8514506866 710311.9410938219 1.1074966515069504 1.0519426943976553 1.067569750059629 1.308841039879049 1.1419829116629048 1.1342858231937558 1.2095104124847218 1.2033287642746453 1.1234048103173964 1.0 19.438093213188782 AMGIMNSFVNDIFER ddPTM_KYSE-520_SHP099_60min_R1 5 AMGIMNSFVNDIFER 15 0 P62807;O60814;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;P57053;Q5QNW6-2;Q16778;P06899;P33778;P23527;Q99880 P62807;Q16778;Q99880 HIST1H2BC;HIST1H2BK;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;H2BFS;HIST2H2BE;HIST1H2BJ;HIST1H2BB;HIST1H2BO;HIST1H2BL Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-J;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-L 0 ;;;; 235.73 9.1278e-18 1004905000.0 195205.0 329323.0 297786.0 391740.0 271013.0 274542.0 198703.0 228197.0 300358.0 201925.0 False True 184376.58951847992 313501.82875609887 316981.7620344461 428970.85181907425 292340.1812469631 272828.48154181615 218789.83839439985 227405.43786858005 245820.55860901624 200136.10159527257 0.9212560255187617 1.5664431667110283 1.5838310005431502 2.1433956612513883 1.460706883549432 1.3632147292123564 1.0932052570747581 1.1362539594603136 1.2282669475901433 1.0 17.610621906021446 -6.487652480858982 2.523916568276556 1.1263418245018322 1.573139348721698 0.3278517701793364 0.28117291301476677 0.35735016359703103 4.540643025076096 0.12185966893407571 0.09765088431490608 3.253475338738141e-07 6.487652480858982 0.44679752421986585 AMHT(ph)PKPAVGEEK ddPTM_KYSE-520_SHP099_60min_R1 3 AMHTPKPAVGEEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMHT(1)PKPAVGEEK;AMHT(1)PKPAVGEEK;AMHT(1)PKPAVGEEK 155.79 5.268200000000001e-06 2238670000.0 2527910.0 2284170.0 2117390.0 2082530.0 1752850.0 1970300.0 2164040.0 2619630.0 2185740.0 2408760.0 True False 2387681.793036351 2174435.0445909332 2253880.3473437824 2280453.025064523 1890789.322647767 1958002.626854325 2382802.282195123 2610543.114956239 1788864.714021504 2387420.2603869243 1.0001095461296723 0.9107885530964402 0.9440651839733071 0.9551954730814484 0.7919800941713255 0.8201332037523195 0.99806570369347 1.0934577201473332 0.7492877327478097 1.0 21.18702111739801 -9.344717281385204 11.808164487711053 0.9999999997542428 0.9206745754204418 0.056364235144618635 0.10001707331852319 0.0 0.0 0.09756431589680205 0.023662822337273126 4.52150190979448e-10 9.344717281385204 -0.07932542433380096 AMHT(ph)PKPSVGEEK ddPTM_KYSE-520_SHP099_60min_R1 3 AMHTPKPSVGEEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMHT(1)PKPSVGEEK;AMHT(1)PKPSVGEEK;AMHT(1)PKPSVGEEK 197.49 2.6217000000000002e-08 2233800000.0 1742080.0 1604030.0 1332920.0 1556730.0 1402880.0 1422510.0 1481390.0 1815850.0 1782720.0 1717310.0 True False 1645443.349649616 1526969.991101885 1418842.155947407 1704681.1511520573 1513278.6747046828 1413631.5874367075 1631143.3581731555 1809551.240172574 1459022.9867140716 1702095.9694469643 0.9667159661885837 0.8971115721506701 0.8335852862682058 1.0015188225291038 0.8890677740082829 0.8305240202736729 0.9583145647792924 1.0631311469238267 0.8571919638515619 1.0 20.698880952259852 -6.98214167637501 24.943048882339866 0.9782415179742456 0.9027371675946886 0.18793697476156646 0.06811681011330618 358.346908956529 500508.51515377534 0.027772444310992878 0.01872005307706441 1.0419774580676338e-07 6.98214167637501 -0.07550435037955705 AMKPPGGESSNLFGS(ph)PEEATPSSRPNR ddPTM_KYSE-520_SHP099_60min_R1 6 AMKPPGGESSNLFGSPEEATPSSRPNR 27 2 A6NGP5;Q9H910;Q9H910-3;H3BMV3;H3BMM8;B4E1P3 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 AMKPPGGES(0.074)S(0.074)NLFGS(0.851)PEEATPSSRPNR;AMKPPGGESSNLFGS(0.562)PEEAT(0.432)PS(0.003)S(0.003)RPNR;AMKPPGGESSNLFGS(0.996)PEEAT(0.004)PSSRPNR;AMKPPGGESSNLFGS(0.976)PEEAT(0.01)PS(0.007)S(0.007)RPNR;AMKPPGGESSNLFGS(1)PEEATPSSRPNR;AMKPPGGES(0.002)S(0.01)NLFGS(0.983)PEEAT(0.003)PS(0.001)S(0.001)RPNR 188.64 2.0221e-15 8329130000.0 3817054.0 3625429.0 3244660.0 3558884.0 3558640.0 3194660.0 3148054.0 3437728.0 4191900.0 3382152.0 True False 3605314.4055114943 3451257.9489601306 3453815.9752395544 3897119.2653425126 3838684.72210814 3174720.9419410415 3466290.020366298 3425803.3239397476 3430756.629199608 3352188.764554443 1.0755105570526233 1.0295535816637866 1.030316673022624 1.162559610768369 1.1451278527921325 0.9470591201516095 1.034037837313443 1.0219601474009143 1.0234377805557762 1.0 21.676671960013852 -6.260329361009456 24.99943326015742 1.0084676665581895 1.086201925797195 0.4554670314645982 0.04544443205467326 111.12322969151275 2502689.62051933 0.017010021532576875 0.01611426108139765 5.491242700800081e-07 6.260329361009456 0.07773425923900557 AMLDQLMGTS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 11 AMLDQLMGTSR 11 0 Q9Y383;V9GZ75;F8WEU3 Q9Y383 LUC7L2;C7orf55-LUC7L2 Putative RNA-binding protein Luc7-like 2 1 AMLDQLMGT(0.248)S(0.752)R;AMLDQLMGT(0.231)S(0.769)R;AMLDQLMGT(0.019)S(0.981)R;AMLDQLMGT(0.125)S(0.875)R;AMLDQLMGT(0.178)S(0.822)R;AMLDQLMGT(0.486)S(0.514)R;AMLDQLMGT(0.023)S(0.977)R;AMLDQLMGT(0.131)S(0.869)R;AMLDQLMGT(0.022)S(0.978)R;AMLDQLMGT(0.077)S(0.923)R;AMLDQLMGT(0.196)S(0.804)R 189.99 8.2792e-07 8730045000.0 14166010.0 9682580.0 8700640.0 8577320.0 9897690.0 10864870.0 9039130.0 9803570.0 11134750.0 8312260.0 True False 13380193.186059175 9217414.322951118 9261497.175916204 9392505.913934698 10676581.892847419 10797058.31621112 9952893.473807503 9769563.703840438 9112960.084205333 8238619.843240415 1.6240818778690578 1.1188056371497441 1.1241563941702002 1.1400581763268296 1.2959187456145693 1.3105421201185585 1.208077768265228 1.185825282599503 1.1061270282646058 1.0 22.97397124264474 -1.0000000010047567 0.02581870974378205 2.097909045377551e-13 2.87641430585583 0.3273649282732072 0.1335074371511903 2711.5271847674194 5.392729038424973 204.09854115089843 437.46789268268026 0.09999999976864621 1.0000000010047567 2.8764143058556204 AMLDSGIYPPGS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 11 AMLDSGIYPPGSPGK 15 0 O95295 O95295 SNAPIN SNARE-associated protein Snapin 1 AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK;AMLDSGIYPPGS(1)PGK 296.47 2.5135e-33 9527130000.0 13739350.0 14257660.0 10852750.0 9654420.0 10019460.0 13462570.0 10556520.0 12291340.0 14838740.0 12810940.0 True False 12977200.8667848 13572700.612416027 11552335.63001395 10571973.17409278 10807934.499070898 13378545.106943224 11623676.063306792 12248704.210360335 12144398.870194746 12697445.038360495 1.0220324504322822 1.0689316292696114 0.909815761762541 0.8326063347510928 0.8511897052059559 1.053640717996813 0.9154342490312248 0.9646589666941294 0.9564442951715931 1.0 23.598034893389215 -4.762117389036458 24.9999959517602 0.9310321393526994 1.045482063097945 0.32758245076700343 0.06278664689579073 19.533701811524136 720390.7702033477 0.017179068266709556 0.03956887813848251 1.7293488560737766e-05 4.762117389036458 0.11444992374524554 AMLPGS(ph)PLFTR ddPTM_KYSE-520_SHP099_60min_R1 13 AMLPGSPLFTR 11 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 AMLPGS(1)PLFTR;AMLPGS(0.996)PLFT(0.004)R;AMLPGS(1)PLFTR;AMLPGS(1)PLFTR;AMLPGS(1)PLFTR;AMLPGS(1)PLFTR;AMLPGS(1)PLFTR;AMLPGS(1)PLFTR;AMLPGS(1)PLFTR;AMLPGS(1)PLFTR;AMLPGS(1)PLFTR;AMLPGS(1)PLFTR;AMLPGS(1)PLFTR 184.98 1.0614e-06 8917820000.0 7397784.0 8373160.0 7731606.0 6836859.0 6767132.0 7480973.0 6045277.0 6955199.0 8335040.0 7111032.0 True False 6987414.174403203 7970900.825230607 8229997.693766993 7486632.023783385 7299666.788685876 7434281.472580968 6656392.595377937 6931073.038024645 6821606.845259651 7048033.788779185 0.9913990743812137 1.1309396441771706 1.1677012256765216 1.0622298712163483 1.035702581379122 1.0548021895718929 0.9444325601808606 0.983405194376232 0.9678737431877785 1.0 22.748789409982518 -6.272442841279265 1.2985238920162425 0.9735468324672907 1.0965533616182412 0.5043129769174748 0.04797437101277163 0.3521550373284926 1.207031102467172 0.0238602751998004 0.021310129630169816 5.340195527676206e-07 6.272442841279265 0.12300652915095056 AMLT(ph)PKPAGGDEK ddPTM_KYSE-520_SHP099_60min_R1 2 AMLTPKPAGGDEK 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 AMLT(1)PKPAGGDEK;AMLT(1)PKPAGGDEK 129.32 0.00012244 1452200000.0 2244230.0 2304270.0 1810070.0 1435500.0 1371340.0 1929250.0 1584590.0 2096020.0 2412390.0 2341840.0 True False 2119738.0881384085 2193569.410420218 1926750.008414397 1571929.4884011887 1479256.6561427321 1917208.835131047 1744775.8213080952 2088749.3958347447 1974360.7874030469 2321093.119523949 0.913249912426246 0.9450587707873238 0.830104571077945 0.6772367188454671 0.6373103447250424 0.8259939332051711 0.7517043614630786 0.8998990080428753 0.8506167937837771 1.0 21.146372972394563 -9.172589375043113 8.768599996470837 1.0000139564164043 0.8106126750352566 0.2547906376904272 0.0949168499464921 0.0 0.0 0.1027972530767312 0.02493199602698311 6.720639883834932e-10 9.172589375043113 -0.18940128138114776 AMS(ph)LNTLNVDAPR ddPTM_KYSE-520_SHP099_60min_R1 12 AMSLNTLNVDAPR 13 0 Q6P597;Q6P597-3;Q6P597-2 Q6P597 KLC3 Kinesin light chain 3 1 AMS(0.99)LNT(0.01)LNVDAPR;AMS(1)LNTLNVDAPR;AMS(1)LNTLNVDAPR;AMS(0.996)LNT(0.004)LNVDAPR;AMS(1)LNTLNVDAPR;AMS(0.975)LNT(0.025)LNVDAPR;AMS(0.982)LNT(0.018)LNVDAPR;AMS(1)LNTLNVDAPR;AMS(1)LNTLNVDAPR;AMS(1)LNTLNVDAPR;AMS(1)LNTLNVDAPR;AMS(1)LNTLNVDAPR 297.67 1.8045e-30 39002490000.0 17801380.0 19170960.0 14855110.0 12482370.0 13949640.0 17386720.0 13092660.0 17705130.0 18840550.0 18598080.0 True False 16813901.96522876 18249958.30540239 15812694.159616375 13668690.691838626 15047397.305405583 17278203.031203665 14416193.844847968 17643715.03643839 15419581.051615413 18433315.480287284 0.9121474638249241 0.9900529465206096 0.8578323403907767 0.7415210088741778 0.8163152918148325 0.9373356111482547 0.7820727562691989 0.9571644913963906 0.8365061113452553 1.0 24.13581224667115 -9.589829150530676 9.623119146833155 0.9999999999999999 0.8698570150595817 0.21120485478804074 0.07530690448652501 0.0 0.0 0.07574001212811508 0.018369651044887268 2.57140716367519e-10 9.589829150530676 -0.1301429849404182 AMS(ph)TTSISSPQPGK ddPTM_KYSE-520_SHP099_60min_R1 6 AMSTTSISSPQPGK 14 0 Q9UJU6;H0Y5J4;Q9UJU6-5;B4DDD6;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;Q9UJU6-4 Q9UJU6;B4DDD6 DBNL Drebrin-like protein 1 AMS(0.997)T(0.003)TSISSPQPGK;AMS(0.989)T(0.011)TSISSPQPGK;AMS(0.982)T(0.018)TSISSPQPGK;AMS(0.711)T(0.255)T(0.034)SISSPQPGK;AMS(0.99)T(0.01)TSISSPQPGK;AMS(0.978)T(0.022)T(0.001)SISSPQPGK 227.47 2.2697e-14 10069370000.0 7865810.0 8714970.0 6268760.0 5015100.0 4879970.0 7739320.0 6491380.0 8654940.0 8967730.0 11344970.0 True False 7429477.839196511 8296289.759763338 6672854.299970641 5491733.596155206 5263995.875768847 7691016.033125008 7147592.040163671 8624918.03321819 7339416.290076613 11244462.392053086 0.6607232591615249 0.7378111527703325 0.5934347118886373 0.48839450074878055 0.4681411784959256 0.6839825475836496 0.635654404003802 0.7670369407179276 0.6527138456404704 1.0 23.422711350417543 -8.545016987426509 0.6216455932344955 1.0085780917842222 0.6012838489752381 0.6374084346199491 0.08605765448875187 1.3053368647523735 0.8498721117351715 0.12611140795561182 0.039436564916994515 2.8509067521194706e-09 8.545016987426509 -0.4072942428089841 AMSEVTS(ph)LHEDDWR ddPTM_KYSE-520_SHP099_60min_R1 1 AMSEVTSLHEDDWR 14 0 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 AMSEVT(0.052)S(0.948)LHEDDWR 119.46 7.2165e-05 292910000.0 103760.0 119590.0 100010.0 193800.0 173580.0 158750.0 135070.0 191700.0 224900.0 150400.0 True False 98004.22595956801 113844.71689175045 106456.80462165776 212218.6937319053 187239.75846489973 157759.18236467734 148724.193756167 191035.03744311628 184063.829267633 149067.57300942947 0.6574483234752109 0.7637121514318144 0.7141513239430262 1.423640899543465 1.25607303241635 1.0583065061017534 0.9976964859202426 1.2815331569866781 1.234767733529745 1.0 17.185606933624626 -5.241443769442807 24.801635706589316 1.1812359362657852 0.7169646589722766 0.7355640189373556 0.12832234628447287 392.9480834251735 487393.97086579434 0.03637523980500672 0.06289793346830148 5.735301199197803e-06 5.241443769442807 -0.4642712772935086 AMST(ph)TSISSPQPGK ddPTM_KYSE-520_SHP099_60min_R1 2 AMSTTSISSPQPGK 14 0 Q9UJU6;H0Y5J4;Q9UJU6-5;B4DDD6;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;Q9UJU6-4 Q9UJU6;B4DDD6 DBNL Drebrin-like protein 1 AMS(0.016)T(0.492)T(0.492)SISSPQPGK;AMS(0.166)T(0.417)T(0.417)SISSPQPGK 320.62 4.7338e-42 6654500000.0 4091700.0 4438300.0 2915900.0 2550000.0 2087400.0 3791100.0 3329300.0 4457400.0 4365700.0 5285300.0 True False 3864725.2443982703 4225077.405975887 3103863.579604954 2792351.2333145407 2251666.504318651 3767438.3386628623 3665858.1348367995 4441938.319764978 3572998.930341068 5238476.353901182 0.7377575049126915 0.8065470034677926 0.5925126639721212 0.533046451805596 0.4298323314262546 0.7191859014228797 0.6997947279282406 0.8479447113390121 0.6820683513594932 1.0 22.320715824538393 -8.118399146368043 0.6855160769952687 0.992684056934033 0.6327447723385972 0.4533340605634717 0.11395292610345545 0.8794404444104569 0.9251117827053709 0.12711848835768563 0.04978570895755057 7.613789289908147e-09 8.118399146368043 -0.3599392845954359 AMSTTS(ph)ISSPQPGK ddPTM_KYSE-520_SHP099_60min_R1 1 AMSTTSISSPQPGK 14 0 Q9UJU6;H0Y5J4;Q9UJU6-5;B4DDD6;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;Q9UJU6-4 Q9UJU6;B4DDD6 DBNL Drebrin-like protein 1 AMS(0.006)T(0.006)T(0.005)S(0.458)IS(0.358)S(0.167)PQPGK 92.925 0.039546 405090000.0 1276000.0 1616200.0 1108200.0 963570.0 951340.0 1501500.0 943330.0 1275100.0 1478800.0 1313100.0 True False 1205217.736357064 1538555.3260343405 1179636.3451826938 1055147.4030921157 1026205.04561584 1492128.581546854 1038691.0024135984 1270676.9757105769 1210287.1975143452 1301466.9555763402 0.9260455912408062 1.1821701038525472 0.9063897781871111 0.8107369907250971 0.7884987330787792 1.1464974774454273 0.798092489373751 0.9763420963291931 0.9299407813073386 1.0 20.31170725130719 -4.806348340556637 24.997232609329334 0.9139164015015561 1.0541082872897982 0.1718951784261017 0.11760332408625243 181.03542392353654 100767.33645230325 0.0299233263564259 0.06229078690098747 1.561894369964021e-05 4.806348340556637 0.14019188578824215 AMSTTSIS(ph)SPQPGK ddPTM_KYSE-520_SHP099_60min_R1 1 AMSTTSISSPQPGK 14 0 Q9UJU6;H0Y5J4;Q9UJU6-5;B4DDD6;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;Q9UJU6-4 Q9UJU6;B4DDD6 DBNL Drebrin-like protein 1 AMSTTS(0.003)IS(0.615)S(0.383)PQPGK 202.25 2.9557e-11 3318500000.0 1772600.0 2058500.0 1374500.0 1134700.0 1079200.0 1852400.0 1185800.0 1564000.0 1696200.0 1640000.0 True False 1674270.3444095044 1959606.5701285056 1463102.4692777586 1242541.5468400046 1164126.9001919574 1840838.4844871075 1305672.2362927564 1558574.8490403448 1388212.8377223636 1625470.8759006923 1.0300217427653213 1.2055623999062208 0.900109925665101 0.764419446242922 0.7161782579136653 1.1324955197779705 0.8032578470957028 0.958845139674816 0.8540373489947267 1.0 20.632426276339796 -4.806688529801966 9.562132196944619 0.8841332501952731 1.1175193404579764 0.35854999668881515 0.12096537164318413 0.32607487647267674 66.07869843067603 0.031349207203230346 0.06579445088689329 1.5606713942174296e-05 4.806688529801966 0.2333860902627033 AMSTTSISS(ph)PQPGK ddPTM_KYSE-520_SHP099_60min_R1 9 AMSTTSISSPQPGK 14 0 Q9UJU6;H0Y5J4;Q9UJU6-5;B4DDD6;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;Q9UJU6-4 Q9UJU6;B4DDD6 DBNL Drebrin-like protein 1 AMSTTSIS(0.089)S(0.911)PQPGK;AMSTTSIS(0.139)S(0.861)PQPGK;AMSTTSIS(0.003)S(0.997)PQPGK;AMSTTSIS(0.006)S(0.994)PQPGK;AMSTTSIS(0.017)S(0.983)PQPGK;AMSTTSIS(0.046)S(0.954)PQPGK;AMSTT(0.002)S(0.002)IS(0.258)S(0.738)PQPGK;AMSTT(0.05)S(0.032)IS(0.15)S(0.768)PQPGK;AMSTTS(0.002)IS(0.124)S(0.873)PQPGK 379.69 2.521499999999999e-81 25336310000.0 22965200.0 27455100.0 20203100.0 16668600.0 15136800.0 23919830.0 16699120.0 20777010.0 24771800.0 22047770.0 True False 21691274.576008804 26136115.78505473 21505424.15210295 18252778.732402682 16327980.043389175 23770537.468359563 18387230.01730568 20704939.401700567 20273865.56626039 21852443.910705507 0.9926246540041342 1.1960271305055565 0.9841198650356654 0.8352740227586467 0.747192401459047 1.0877747846186843 0.8414267114671682 0.9474885045492428 0.9277619313017995 1.0 24.381291299575373 -4.981925734196072 8.727262996598489 0.9077953106490224 1.093819497384477 0.345203302197884 0.09950729236182553 0.20664680186549952 83.04599363802811 0.025519234988793417 0.05227013593683734 1.042495684388484e-05 4.981925734196072 0.18602418673545462 AMTLS(ph)PQEEVAAGQMASSSR ddPTM_KYSE-520_SHP099_60min_R1 7 AMTLSPQEEVAAGQMASSSR 20 0 A0A494BZT8;Q9Y6A5 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 AMTLS(1)PQEEVAAGQMASSSR;AMTLS(1)PQEEVAAGQMASSSR;AMTLS(1)PQEEVAAGQMASSSR;AMT(0.015)LS(0.984)PQEEVAAGQMASSSR;AMT(0.002)LS(0.998)PQEEVAAGQMASSSR;AMTLS(1)PQEEVAAGQMASSSR;AMTLS(1)PQEEVAAGQMASSSR 344.73 3.9593999999999995e-65 5123080000.0 2135010.0 2589780.0 1918547.0 1604057.0 1757090.0 2347520.0 1723370.0 2185330.0 2564650.0 2370200.0 True False 2016576.7392630826 2465363.081460967 2042219.6094037336 1756506.0950026785 1895362.9865254683 2332868.2569116713 1897585.0580703747 2177749.600289856 2098974.209565297 2349201.8719876944 0.8584093020310882 1.0494470955682438 0.869324868907831 0.7477033438239484 0.8068114575959254 0.9930471641152733 0.8077573412049088 0.9270167993043654 0.8934839677227584 1.0 21.163739261900233 -8.527743059530293 0.9997235843870125 1.0001352026268524 0.8800075532004079 0.14912660581494952 0.08484408282067986 4.214312035884184 6.016969632025279 0.08755782428130475 0.027573609264781158 2.9665859836821693e-09 8.527743059530293 -0.1201276494264445 AMTVEKAS(ph)PVGDGNFR ddPTM_KYSE-520_SHP099_60min_R1 4 AMTVEKASPVGDGNFR 16 1 Q86YS7;H0YFC4 Q86YS7 C2CD5 C2 domain-containing protein 5 1 AMT(0.002)VEKAS(0.998)PVGDGNFR;AMTVEKAS(1)PVGDGNFR;AMTVEKAS(1)PVGDGNFR;AMTVEKAS(1)PVGDGNFR 180.86 4.4477e-09 4450570000.0 3831700.0 4015190.0 3591440.0 2948120.0 3343980.0 3389610.0 2966520.0 3018740.0 4604290.0 3189660.0 True False 3619147.962695419 3822294.24547694 3822949.9689071774 3228308.4384153974 3607132.20135647 3368454.186678013 3266404.7920451933 3008268.695519211 3768267.0007055174 3161402.093917929 1.1447920432703342 1.209050330178015 1.2092577455623152 1.0211635035689341 1.1409912735542436 1.0654937545459406 1.0332139648826304 0.9515615559648916 1.1919606835065704 1.0 21.592133110421965 -5.256646687259274 24.90233844275307 1.0585172806216618 1.1898350763190995 0.4442260472729347 0.06658263989145488 344.57114072201864 1790350.46870793 0.01781805554405712 0.029611739212730814 5.538004607594467e-06 5.256646687259274 0.13131779569743762 AMVDSQQKS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 3 AMVDSQQKSPVK 12 1 Q03001;F8W9J4;Q03001-14;F6QMI7;E9PHM6;Q03001-8;A0A494C1D7;E7ETB9;Q03001-9;Q03001-3;Q6P0N6;H0YAT7 Q03001 DST Dystonin 1 AMVDS(0.042)QQKS(0.958)PVK;AMVDSQQKS(1)PVK;AMVDSQQKS(1)PVK 181.76 5.394300000000001e-07 2001610000.0 2468390.0 2186450.0 1987380.0 1677800.0 1874640.0 2034490.0 1905980.0 2143230.0 2605240.0 2145780.0 True False 2331463.4860865274 2081409.6600716424 2115489.6947204294 1837257.6075510343 2022163.5027574573 2021791.993254252 2098655.05897223 2135795.63536364 2132194.0887559317 2126770.058591577 1.0962461487870039 0.9786716959190341 0.9946960115290423 0.8638722367418186 0.950814355594514 0.9506396730980662 0.9867804234379876 1.0042437952968173 1.0025503604127033 1.0 21.020232630238084 -9.592603532775218 15.201985145006908 0.9999999682121911 0.9769194792373039 0.005949895474222866 0.05496409072737782 0.0 0.0 0.05534375773324921 0.013422832873692987 2.5550327264752724e-10 9.592603532775218 -0.023080488974887126 AMVDSQQKS(ph)PVKR ddPTM_KYSE-520_SHP099_60min_R1 4 AMVDSQQKSPVKR 13 2 Q03001;F8W9J4;Q03001-14;F6QMI7;E9PHM6;Q03001-8;A0A494C1D7;E7ETB9;Q03001-9;Q03001-3;Q6P0N6;H0YAT7 Q03001 DST Dystonin 1 AMVDSQQKS(1)PVKR;AMVDS(0.002)QQKS(0.998)PVKR;AMVDSQQKS(1)PVKR;AMVDSQQKS(1)PVKR 130.87 2.2049000000000002e-05 4251790000.0 4979270.0 4461940.0 3963150.0 3709860.0 4317680.0 4085960.0 3802110.0 4150170.0 4974710.0 4197990.0 True False 4703059.967171346 4247581.704891519 4218620.990264206 4062443.9789899173 4657456.851761307 4060458.0080300965 4186464.3838177193 4135774.0289269555 4071428.066233826 4160799.0745867942 1.1303261423740831 1.0208572028471101 1.013896829585109 0.9763614887828621 1.1193659603050732 0.9758841836007996 1.006168360637187 0.993985519317026 0.9785207103849772 1.0 21.98842919149773 -4.253482788311314 3.5995197559130423 1.009704069862584 1.1451848162284177 0.45925986804976604 0.03953077292185413 0.27049424486723933 6.28135112451995 0.009938803430945059 0.09997215627701347 5.5784971005572565e-05 4.253482788311314 0.13548074636583363 ANAS(ph)PQKPLDLK ddPTM_KYSE-520_SHP099_60min_R1 8 ANASPQKPLDLK 12 1 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J7T7;A0A384DVL6 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK;ANAS(1)PQKPLDLK 178.6 1.3324000000000002e-06 9213160000.0 16106670.0 14371880.0 12235590.0 11100970.0 11814950.0 13612700.0 11598810.0 12734950.0 15313610.0 13069370.0 True False 15213200.9072494 13681433.312168315 13024315.709036198 12156002.851171661 12744719.347130226 13527738.089925323 12771330.908276943 12690775.430809677 12533044.448693285 12953585.549615983 1.1744393742549841 1.0561889030465321 1.0054602765504035 0.9384276503683595 0.9838758001260933 1.0443238312751453 0.985930178123968 0.9797113997665228 0.967534772568421 1.0 23.62684815507018 -4.33599290387482 1.861180092047167 0.986663317493635 1.2163275159414604 0.8369003447851752 0.025365486010126736 0.278315371371582 1.132774369846659 0.00746371853797133 0.10566980266278304 4.6132511228912635e-05 4.33599290387482 0.22966419844782537 ANEAGGQVGPEAPRPPET(ph)SPEMR ddPTM_KYSE-520_SHP099_60min_R1 1 ANEAGGQVGPEAPRPPETSPEMR 23 1 Q8N3D4;E9PIH6 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 ANEAGGQVGPEAPRPPET(0.59)S(0.41)PEMR 129.51 0.00013799 936110000.0 1017800.0 1070100.0 873760.0 789170.0 774360.0 921670.0 785530.0 928530.0 1090600.0 894340.0 True False 961340.6050660007 1018690.789747154 930083.9676654295 864172.4795273885 835297.7264942941 915917.5156538718 864939.0384340102 925309.1461505305 892574.5317887107 886416.8433859919 1.0845242982904186 1.1492231869781417 1.0492625163942453 0.9749053010165816 0.9423306119766073 1.0332808119430485 0.9757700847944863 1.0438758616273303 1.0069467186331855 1.0 19.757625769676093 -4.9783721917976465 4.437013556823843 0.9975167567736589 1.1156974377788618 0.7019154616735748 0.031218885391278775 0.10352078748050175 4.964496662758082 0.008528595494495231 0.017873734086215114 1.0510607252404688e-05 4.9783721917976465 0.11818068100520285 ANEAGGQVGPEAPRPPETS(ph)PEMR ddPTM_KYSE-520_SHP099_60min_R1 1 ANEAGGQVGPEAPRPPETSPEMR 23 1 Q8N3D4;E9PIH6 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 ANEAGGQVGPEAPRPPET(0.088)S(0.912)PEMR 90.71 0.0021458000000000002 1508300000.0 477250.0 576220.0 494880.0 386510.0 419830.0 519010.0 398080.0 456490.0 663360.0 483690.0 True False 450775.9911257117 548537.5262761466 526780.7566359963 423243.79419153096 452868.2324940595 515770.6660730158 438321.8112864057 454906.5427355668 542910.5459447633 479404.8829051253 0.9402824359945468 1.1442051298102918 1.0988222594725776 0.8828524891668476 0.9446466830912161 1.075856096724587 0.9143040192461911 0.9488984341980372 1.1324677017363751 1.0 18.870885077848417 -5.2223554526810085 24.96925909494632 0.9825324981147732 1.0694134733758796 0.14021979425509712 0.08472679385956182 939.8993632784528 600465.302217725 0.022739821635891787 0.03938548501339143 5.993003720627939e-06 5.2223554526810085 0.08688097526110639 ANES(ph)SPKPVGPPPER ddPTM_KYSE-520_SHP099_60min_R1 1 ANESSPKPVGPPPER 15 1 A6PVM9;Q9BQI0-3;Q9BQI0;Q9BQI0-2 A6PVM9 AIF1L Allograft inflammatory factor 1-like 1 ANES(0.766)S(0.234)PKPVGPPPER 56.016999999999996 0.036857 629090000.0 482960.0 474330.0 463930.0 284520.0 382460.0 420310.0 380150.0 410610.0 531460.0 478450.0 True False 456169.24604310864 451542.4748161553 493835.6701142458 311560.6952559424 412557.42610027414 417686.6893839222 418579.2719064695 409185.689747094 434960.2610163462 474211.30522846774 0.961953544788084 0.9521967735429865 1.041383165414674 0.657008156112679 0.8699864839820938 0.8808028926739466 0.882685139074878 0.8628762858151486 0.9172287885603846 1.0 18.855170531610653 ANESS(ph)PKPVGPPPER ddPTM_KYSE-520_SHP099_60min_R1 3 ANESSPKPVGPPPER 15 1 A6PVM9;Q9BQI0-3;Q9BQI0;Q9BQI0-2 A6PVM9 AIF1L Allograft inflammatory factor 1-like 1 ANES(0.189)S(0.811)PKPVGPPPER;ANES(0.167)S(0.833)PKPVGPPPER;ANES(0.129)S(0.871)PKPVGPPPER 199.65 3.3651e-11 2093300000.0 2193930.0 2489320.0 1977050.0 1563850.0 2067140.0 2032690.0 1885770.0 2253890.0 2890870.0 1911610.0 True False 2072228.3294089737 2369729.330654503 2104493.806391847 1712477.833811352 2229812.157582281 2020003.2277219282 2076402.0349416342 2246071.7816518797 2365960.8809022787 1894674.6226100773 1.0937119781307363 1.2507315516740267 1.1107415390895592 0.9038374258965196 1.1768839519846015 1.0661478248646197 1.0959148394995715 1.185465702051639 1.248742582324222 1.0 20.853518681228753 -7.250041165845234 23.10772778357803 1.1628281050499327 1.1000865173242123 0.030859442725803765 0.10140790525908239 763.6844561982384 1548233.5958494544 0.048801823328704454 0.02779876310027402 5.622880245848235e-08 7.250041165845234 -0.06274158772572047 ANFSGMSER ddPTM_KYSE-520_SHP099_60min_R1 3 ANFSGMSER 9 0 P05120 P05120 SERPINB2 Plasminogen activator inhibitor 2 0 ;; 102.55 0.015847999999999998 2323260000.0 1985560.0 2442230.0 1617450.0 1386970.0 2132560.0 2263740.0 1733890.0 2085630.0 2013260.0 2076270.0 False True 1875417.0286842715 2324901.604938034 1721713.4150115002 1518787.2117922632 2300380.339393402 2249611.158968281 1909168.5223356776 2078395.436319703 1647702.7341545352 2057875.8631136154 0.9113363261118776 1.1297579443982604 0.8366459055535579 0.7380363602177159 1.117842130629236 1.0931714586343249 0.9277374581025796 1.0099712395552571 0.8006813062385219 1.0 20.972724526739764 -3.9610722038940436 17.48210098235717 0.9625302681723776 0.6660154230252199 0.013391267311814836 0.12901884789542914 70100709.81143121 788462559.1873382 0.03296400755250494 674924510.4075958 0.00010937745050071641 3.9610722038940436 -0.29651484514715776 ANHLGDSGGT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 1 ANHLGDSGGTPVK 13 0 Q86TI0-2;Q86TI0;C9JIE2;H0Y8P0;H7C380;H7C0Z7 Q86TI0-2 TBC1D1 TBC1 domain family member 1 1 ANHLGDS(0.001)GGT(0.999)PVK 74.732 0.022675 373640000.0 266990.0 280100.0 332910.0 263850.0 282530.0 284040.0 209350.0 233540.0 292530.0 253820.0 True False 252179.5324686305 266643.5755613288 354369.91127483314 288926.2246706049 304763.5036241973 282267.2010007118 230513.14105910677 232729.9042486455 239413.92608119515 251571.3522689718 1.0024175256609045 1.059912319731232 1.4086258553635014 1.148486193140523 1.2114396209086409 1.1220164714896512 0.9162932860998009 0.9251049539210584 0.9516740436535146 1.0 17.940608118861388 -6.671179133158754 4.443610304385297 0.9419905112310469 1.1720323014688496 0.5065309495743265 0.10216525730147355 0.18208263320983667 6.452257359046787 0.04284095599197114 0.03221516182653384 2.1321652789404534e-07 6.671179133158754 0.2300417902378027 ANKT(ph)PLRPLDPTR ddPTM_KYSE-520_SHP099_60min_R1 1 ANKTPLRPLDPTR 13 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13;C9J2Z7;C9K073 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 ANKT(1)PLRPLDPTR 69.594 0.055134 1434300000.0 2065800.0 2274900.0 1983900.0 1643800.0 1668900.0 1964300.0 1723500.0 2055200.0 2418400.0 1974200.0 True False 1951205.9559297955 2165610.389305482 2111785.368352234 1800026.2577735106 1800232.935257926 1952040.0750799116 1897728.1997390522 2048070.9908872868 1979279.522902821 1956710.1239043595 0.9971870294391991 1.1067609672220071 1.0792530495720245 0.9199248451690909 0.9200304701576318 0.9976133159595815 0.9698565855796685 1.0466910585614126 1.0115343600070035 1.0 20.899998613596825 -5.239736895912627 24.80179184694307 0.9804643031618786 1.0656364229914574 0.4021159453455757 0.04474240182844521 750.842699532529 858068.4341266018 0.012967770815400915 0.02243666016521792 5.757886557202945e-06 5.239736895912627 0.08517211982957884 ANLQQAIVT(ph)PLKPVDNTYYK ddPTM_KYSE-520_SHP099_60min_R1 4 ANLQQAIVTPLKPVDNTYYK 20 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 ANLQQAIVT(1)PLKPVDNTYYK;ANLQQAIVT(1)PLKPVDNTYYK;ANLQQAIVT(1)PLKPVDNTYYK;ANLQQAIVT(1)PLKPVDNTYYK 234.55 1.0852000000000002e-25 9128830000.0 5969850.0 7058410.0 5254600.0 4985790.0 4391980.0 6114080.0 5033660.0 6203370.0 7434260.0 6625020.0 True False 5638690.519899062 6719313.388710591 5593319.923657266 5459637.982567572 4737603.839052141 6075919.758817181 5542511.476587444 6181851.957347444 6084385.7864437355 6566327.476987561 0.8587281916201243 1.0232985504087615 0.8518186068635306 0.831459899266598 0.7214997813702728 0.9253147638631991 0.8440808802198494 0.9414474040492871 0.9266040732459895 1.0 22.646655271358846 -7.750411632234086 1.2435866875216646 0.9933009816167009 0.8656096672648191 0.2531043589169776 0.07302988739087597 0.6572500294220156 2.0666702387371902 0.07267893647728586 0.023406810618826043 1.7765947228823315e-08 7.750411632234086 -0.12769131435188175 ANQIS(ph)PSNSSLK ddPTM_KYSE-520_SHP099_60min_R1 4 ANQISPSNSSLK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 ANQIS(0.739)PS(0.258)NS(0.001)S(0.001)LK;ANQIS(0.985)PS(0.01)NS(0.001)S(0.004)LK;ANQIS(0.498)PS(0.498)NS(0.003)S(0.001)LK;ANQIS(0.692)PS(0.3)NS(0.007)S(0.002)LK 153.14 2.396e-05 2777760000.0 3368930.0 3567660.0 2607010.0 2592150.0 2603470.0 3805690.0 3030690.0 3813350.0 3826150.0 4154980.0 True False 3182048.737104546 3396264.2584331604 2775062.0359634855 2838507.156641686 2808348.2772820164 3781937.2770609744 3337061.721884039 3800122.3788925773 3131417.609392418 4118170.109725525 0.7726851131257976 0.8247022750256231 0.6738580393776988 0.6892641831230404 0.6819408141129926 0.9183538261640773 0.8103263422759517 0.9227696471105353 0.7603905438479146 1.0 21.973571994094883 -6.261767722321298 24.99999531985658 0.8730385687118183 0.7286208745736185 0.515765441130919 0.07427550356117328 26.89557876249407 2047764.4782816258 0.025091061535372425 0.023512792980016423 5.47308606682116e-07 6.261767722321298 -0.14441769413819983 ANRDQDS(ph)S(ph)DDERALEDWVSSETSALPRPR ddPTM_KYSE-520_SHP099_60min_R1 1 ANRDQDSSDDERALEDWVSSETSALPRPR 29 3 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 2 ANRDQDS(0.999)S(0.998)DDERALEDWVS(0.001)S(0.001)ET(0.001)SALPRPR 67.19800000000001 0.061698 125160000.0 32819.0 35839.0 27579.0 27428.0 33635.0 33692.0 12492.0 24655.0 41034.0 25587.0 True False 30998.46464694547 34117.240644564255 29356.78646796021 30034.748873471108 36281.88314302859 33481.715730587166 13754.813270171284 24569.477559520248 33583.25998296161 25360.319086384763 1.2223215544471469 1.3453001331864485 1.157587424983191 1.1843206219592053 1.4306556246174091 1.320240317818499 0.5423754024276396 0.9688157895738349 1.3242443783363715 1.0 14.630285277292103 ANS(ph)FQSPTPSK ddPTM_KYSE-520_SHP099_60min_R1 2 ANSFQSPTPSK 11 0 A0A2R8YFA9;E9PRG5;A0A2R8Y7K9 A0A2R8YFA9 MICALCL 1 ANS(0.999)FQS(0.001)PTPSK;ANS(0.991)FQS(0.009)PTPSK 199.38 3.9025e-07 388100000.0 1403040.0 1696550.0 1144150.0 1087720.0 1262150.0 1449540.0 1129500.0 1600920.0 1683800.0 1567160.0 True False 1325210.5743091027 1615045.191426533 1217903.7397047274 1191096.5817650561 1361474.0243488504 1440492.8831804374 1243680.8828577064 1595366.7821775365 1378064.365143801 1553276.1816320312 0.853171245384514 1.039766920091185 0.7840870503950385 0.7668285884056807 0.8765176730633609 0.9273900547853041 0.8006823883380274 1.0270979501541577 0.8871985429505945 1.0 20.566882941512883 -7.263854405906697 24.984603990717538 0.9678611823115832 0.8669200792622201 0.2672072945141044 0.08131986755271897 326.304353955578 3375720.9869485195 0.0428773760080227 0.022145380045389344 5.446852240314333e-08 7.263854405906697 -0.1009411030493631 ANS(ph)FVGTAQYVSPELLTEK ddPTM_KYSE-520_SHP099_60min_R1 8 ANSFVGTAQYVSPELLTEK 19 0 Q6A1A2;E9PER6;O15530-4;O15530-5;O15530-2;O15530 Q6A1A2 PDPK2P;PDPK1 Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 1 ANS(0.64)FVGT(0.36)AQYVSPELLTEK;ANS(1)FVGTAQYVSPELLTEK;ANS(0.799)FVGT(0.201)AQYVSPELLTEK;ANS(0.837)FVGT(0.163)AQYVSPELLTEK;ANS(1)FVGTAQYVSPELLTEK;ANS(1)FVGTAQYVSPELLTEK;ANS(0.921)FVGT(0.079)AQYVSPELLTEK;ANS(1)FVGTAQYVSPELLTEK 390.17 2.8020999999999995e-92 6673603000.0 4605694.0 5467123.0 3925789.0 3612783.0 3551606.0 5043362.0 3880502.0 4906147.0 5848700.0 5279666.0 True False 4350206.972596639 5204474.204761078 4178851.6404244904 3956140.810097186 3831097.1863261224 5011884.507017858 4272781.012209913 4889128.721160319 4786723.513728799 5232892.266757995 0.8313198038169782 0.9945693393732863 0.7985739868887978 0.7560141903223603 0.7321184903161888 0.957765658363714 0.8165237873045468 0.9343071616854339 0.9147376383298607 1.0 22.319177126802714 -7.695022497120563 0.9286954628526025 0.994216886017953 0.8371791547401382 0.3025532471497666 0.07815955635144937 0.7201175883729024 1.282122605040876 0.0775642099994386 0.028198867493535246 2.0182618119148462e-08 7.695022497120563 -0.15703773127781484 ANS(ph)GQAHKDEALK ddPTM_KYSE-520_SHP099_60min_R1 8 ANSGQAHKDEALK 13 1 Q8IY63;Q8IY63-2 Q8IY63 AMOTL1 Angiomotin-like protein 1 1 ANS(1)GQAHKDEALK;ANS(1)GQAHKDEALK;ANS(1)GQAHKDEALK;ANS(1)GQAHKDEALK;ANS(1)GQAHKDEALK;ANS(1)GQAHKDEALK;ANS(1)GQAHKDEALK;ANS(1)GQAHKDEALK 205.88 1.6591e-09 17561020000.0 10113500.0 9333720.0 8283760.0 8440300.0 9412340.0 8677050.0 8567250.0 8558030.0 10896880.0 8670190.0 True False 9552483.994237581 8885314.081000656 8817744.424084624 9242463.574331276 10153037.609111153 8622893.312361721 9433311.238302512 8528344.191389216 8918281.279990606 8593378.861905754 1.111609780942339 1.033972110829309 1.0261091202639137 1.0755331194930668 1.181495401549131 1.003434557108474 1.0977418067903604 0.9924320024100375 1.0378084596648167 1.0 23.034794070751424 -7.264453727035658 24.933327365574012 1.011340171835994 1.0734704617259982 0.2760322688326071 0.04859247123841943 371.9299554925079 3076389.7964519355 0.025285145617567076 0.013044678446978743 5.439340834160267e-08 7.264453727035658 0.06213028989000424 ANS(ph)KSEGS(ph)PVLPHEPAK ddPTM_KYSE-520_SHP099_60min_R1 1 ANSKSEGSPVLPHEPAK 17 1 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4;Q9UKE5-5;Q9UKE5-8;Q9UKE5-3;Q9UKE5-7 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 2 ANS(0.909)KS(0.164)EGS(0.927)PVLPHEPAK 130.83 5.0707e-05 761310000.0 3089700.0 2920400.0 2577000.0 2495500.0 2901500.0 2981100.0 2806800.0 3171100.0 3724500.0 3106600.0 True False 2918308.1818357487 2780099.6003902284 2743117.543345784 2732671.569700567 3129831.542723281 2962493.8491171002 3090538.73572821 3160100.1942403046 3048224.687004445 3079077.940898224 0.9477863950999644 0.9029000414257855 0.8908892843893279 0.8874967188727273 1.0164833767768318 0.9621366870151024 1.0037221515823802 1.026313803969004 0.9899797100021515 1.0 21.554066956201602 -5.761888486057018 24.99999979489539 0.9994039981869418 0.905786180368677 0.809162723904574 0.022002934155387417 5.127838757137468 285451.9056381973 0.006890268541567358 0.008302081240691242 1.73026058178374e-06 5.761888486057018 -0.09361781781826484 ANS(ph)LGDLYAQK ddPTM_KYSE-520_SHP099_60min_R1 4 ANSLGDLYAQK 11 0 Q13009-2;Q13009 Q13009-2 TIAM1 T-lymphoma invasion and metastasis-inducing protein 1 1 ANS(1)LGDLYAQK;ANS(1)LGDLYAQK;ANS(1)LGDLYAQK;ANS(1)LGDLYAQK 176.43 7.1463e-06 2393820000.0 2705210.0 2565080.0 2204170.0 2219720.0 2247310.0 2274600.0 2080630.0 2456350.0 3103920.0 2405360.0 True False 2555146.6085975654 2441849.706536425 2346254.324996693 2430681.521416846 2424160.5115552125 2260403.3776799683 2290960.3853919716 2447829.4951664004 2540326.3714557206 2384050.3817417645 1.0717670348605635 1.0242441708603627 0.9841462843929255 1.0195596284508943 1.016824363327483 0.9481357420091681 0.9609530079302342 1.0267524184526837 1.0655506238084542 1.0 21.1849832936817 -4.3547975320078045 2.9496617383301476 1.0013674800419257 1.076920151615731 0.29936327669118046 0.03186430069875691 0.42205951749599036 5.748317913683591 0.00886378136976532 0.0666279621703603 4.417763553924167e-05 4.3547975320078045 0.0755526715738053 ANS(ph)PEKPPEAGAAHKPR ddPTM_KYSE-520_SHP099_60min_R1 4 ANSPEKPPEAGAAHKPR 17 2 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 ANS(1)PEKPPEAGAAHKPR;ANS(1)PEKPPEAGAAHKPR;ANS(1)PEKPPEAGAAHKPR;ANS(1)PEKPPEAGAAHKPR 160.57 2.9589999999999996e-08 225342000000.0 13042780.0 10786580.0 10767970.0 10244220.0 11018980.0 10435810.0 10377910.0 11333670.0 13038810.0 9756770.0 True False 12319270.993262667 10268376.505813336 11462090.57556117 11217827.588762939 11886111.036580037 10370676.238822825 11427010.421441201 11294356.144068476 10671290.785651887 9670332.608452199 1.2739242270214373 1.0618431569601263 1.185284006213283 1.1600250004801465 1.2291315632919568 1.072421876136763 1.1816564004689565 1.167938746408456 1.1035081436935081 1.0 23.205134080982056 -8.080571914588438 2.715766474728188 1.0001679952523974 1.1629050293104284 0.42113284820054886 0.06006577876707613 0.3372837347168129 5.652152035228625 0.053719506943895455 0.014470986026772973 8.30669157256254e-09 8.080571914588438 0.16273703405803097 ANS(ph)RNS(ph)FMVIPKS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 ANSRNSFMVIPKSK 14 2 H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3 H3BLU1 TPRN Taperin 3 ANS(1)RNS(1)FMVIPKS(1)K 45.38399999999999 0.057870000000000005 0.0 159000.0 172030.0 150130.0 144510.0 157180.0 172380.0 144590.0 186480.0 204810.0 198900.0 True False 150179.95304135824 163765.4205777058 159807.62001649296 158244.18695148412 169549.1717681355 171304.1124788859 159206.56826241338 185833.1444047592 167621.66683994653 197137.9007418585 0.7618015230770405 0.8307150474943316 0.810638742804472 0.8027080858423891 0.860053653458302 0.8689557504378594 0.8075898529064983 0.9426555913674749 0.8502762087308523 1.0 17.588845642780733 -13.99999993634856 0.07032822968349638 1.5908507912325611 0.6309030056878663 0.7312930661079163 0.03483334602483668 150.46473440819264 0.7599142872802847 14.19864804193526 1.7486100856023974 1.0000001465628669e-14 13.99999993634856 -0.9599477855446948 ANS(ph)TSDSVFTETPS(ph)PVLK ddPTM_KYSE-520_SHP099_60min_R1 4 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 2 ANS(0.821)T(0.121)S(0.055)DS(0.003)VFT(0.003)ET(0.16)PS(0.837)PVLK;ANS(0.922)T(0.06)S(0.018)DSVFTETPS(1)PVLK;ANS(0.998)T(0.002)SDSVFTETPS(1)PVLK;ANS(0.986)T(0.01)S(0.005)DSVFTET(0.014)PS(0.986)PVLK 342.84 3.2118e-59 816107000.0 1333260.0 1379580.0 1390160.0 1397830.0 1492330.0 1632820.0 1912190.0 2184720.0 2479750.0 2249080.0 True False 1259301.410012082 1313302.906008204 1479771.9379346427 1530679.3429270855 1609767.8808037995 1622628.9647161732 2105492.8263759897 2177141.7162374803 2029489.9094104655 2229154.9009577623 0.5649232404042536 0.589148338432623 0.6638264291543198 0.6866635164157614 0.7221426739398678 0.7279121625953434 0.9445251316861647 0.9766668594013209 0.9104301852412723 1.0 21.08806544033141 -6.434991956344078 0.6944786697001573 0.9995971431067725 0.5870519203925343 0.9235487132732505 0.043021071763275666 0.18907444337212495 0.19394037503809058 0.03574793999770682 0.030829598039221386 3.6728910307083957e-07 6.434991956344078 -0.4125452227142382 ANS(ph)TSDSVFTETPSPVLK ddPTM_KYSE-520_SHP099_60min_R1 7 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANS(0.987)T(0.013)SDSVFTETPSPVLK;ANS(0.979)T(0.021)SDSVFTETPSPVLK;ANS(0.982)T(0.018)SDSVFTETPSPVLK;ANS(0.954)T(0.023)S(0.023)DSVFTETPSPVLK;ANS(0.984)T(0.016)SDSVFTETPSPVLK;ANS(0.932)T(0.067)S(0.001)DSVFTETPSPVLK;ANS(0.917)T(0.083)SDSVFTETPSPVLK 370.36 1.7102999999999996e-72 4608740000.0 4759770.0 5986300.0 4401900.0 4178660.0 4218290.0 6850490.0 4965950.0 6944620.0 7075830.0 7481750.0 True False 4495736.069733743 5698709.162380511 4685653.517289018 4575798.590040064 4550245.4242130555 6807733.550849758 5467956.689001527 6920530.734106491 5791037.6391587285 7415467.515713415 0.6062646839470679 0.7684895322250305 0.6318756716768152 0.6170613761497739 0.613615448327575 0.9180450910780924 0.7373718079696118 0.9332561594318699 0.7809403286964024 1.0 22.822106221051836 -6.258312160195486 24.999515676383076 0.8612167608244752 0.6516303679657772 0.6511614774333803 0.08258711624197693 182.35216322695402 1457756.280789989 0.02659142639451313 0.025528998973826142 5.516807621694222e-07 6.258312160195486 -0.20958639285869796 ANSALT(ph)PPKPESGLTLQES(ph)NTPGLR ddPTM_KYSE-520_SHP099_60min_R1 1 ANSALTPPKPESGLTLQESNTPGLR 25 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 2 ANS(0.034)ALT(0.965)PPKPES(0.013)GLT(0.091)LQES(0.533)NT(0.364)PGLR 54.926 0.051498 3272600000.0 1261600.0 1241700.0 1309900.0 1363600.0 1358500.0 1298200.0 1107200.0 1334200.0 1811300.0 1333100.0 True False 1191616.5330627519 1182046.8681703012 1394338.2499141046 1493196.1340187103 1465406.2211923387 1290097.4522571613 1219126.5812306793 1329571.9716046206 1482413.5791572426 1321289.7711361067 0.9018585923344765 0.8946159230112877 1.0552857369925654 1.1301049676141748 1.1090725541092428 0.9763925222458016 0.9226791941198617 1.006268269572232 1.1219443391910875 1.0 20.33351546704928 -4.758475972158056 24.998209877147865 1.0396343013337948 0.8982371972863327 0.4438264110425453 0.06357274992323916 75.18362996361043 634189.7202284687 0.0183558646979248 0.04438177021937465 1.7439098386153466e-05 4.758475972158056 -0.14139710404746209 ANSALT(ph)PPKPESGLTLQESNT(ph)PGLR ddPTM_KYSE-520_SHP099_60min_R1 1 ANSALTPPKPESGLTLQESNTPGLR 25 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 2 ANS(0.026)ALT(0.973)PPKPES(0.024)GLT(0.053)LQES(0.262)NT(0.661)PGLR 64.685 0.023425 2561000000.0 1641400.0 1869800.0 1818200.0 1875500.0 1708000.0 1768700.0 1941400.0 1937200.0 2742500.0 2267700.0 True False 1550348.269950223 1779972.0013729816 1935404.081222857 2053746.956110366 1842409.8828093624 1757660.8872340475 2137655.658238117 1930480.30534588 2244531.1327989507 2247609.9422439025 0.6897763890483738 0.7919399037699334 0.8610942872456978 0.9137470508161245 0.8197195822020575 0.782013308536661 0.951079463594109 0.8589036153749098 0.9986301851637664 1.0 21.09996025647689 -1.0000000000063995 0.13271479832503602 1.0389272464561834 0.028584866891673874 0.6215754636584299 0.05864080953109742 60.262040457262 0.540077360246642 0.31042075861158475 11.434858864606586 0.09999999999852645 1.0000000000063995 -1.0103423795645095 ANSALT(ph)PPKPESGLTLQESNTPGLR ddPTM_KYSE-520_SHP099_60min_R1 8 ANSALTPPKPESGLTLQESNTPGLR 25 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 ANS(0.001)ALT(0.99)PPKPES(0.009)GLT(0.001)LQESNTPGLR;ANS(0.002)ALT(0.998)PPKPESGLTLQESNTPGLR;ANSALT(0.983)PPKPES(0.016)GLT(0.001)LQESNTPGLR;ANS(0.003)ALT(0.996)PPKPESGLTLQESNTPGLR;ANSALT(1)PPKPESGLTLQESNTPGLR;ANS(0.013)ALT(0.987)PPKPESGLTLQESNTPGLR;ANS(0.006)ALT(0.994)PPKPESGLTLQESNTPGLR;ANSALT(1)PPKPESGLTLQESNTPGLR 159.1 1.2391e-09 116293300000.0 7356970.0 10378280.0 6849710.0 6263010.0 7069140.0 9139500.0 7170000.0 9093910.0 10945440.0 9299820.0 True False 6948864.208343901 9879691.850684118 7291253.266523506 6858244.587357381 7625441.100095414 9082456.99037462 7894813.572456615 9062365.348744554 8958024.00808858 9217430.829950478 0.7538829785155258 1.0718487649054804 0.7910288019555096 0.7440516466988479 0.827284873710995 0.985356674536978 0.8565091203943465 0.983176930310986 0.9718569277440087 1.0 23.135933254317056 -7.014704165052482 1.0174656506721769 0.9937029913127474 0.8501628637711206 0.2700847120538076 0.09498322033918434 0.8354973106375069 1.6003695892425982 0.07972521582558606 0.03706817359981063 9.667091626742796e-08 7.014704165052482 -0.14354012754162682 ANSFQS(ph)PTPSK ddPTM_KYSE-520_SHP099_60min_R1 1 ANSFQSPTPSK 11 0 A0A2R8YFA9;E9PRG5;A0A2R8Y7K9 A0A2R8YFA9 MICALCL 1 ANS(0.215)FQS(0.785)PTPSK 184.71 1.0741e-06 558240000.0 936690.0 1032100.0 789240.0 698880.0 769800.0 931380.0 764810.0 900060.0 1056800.0 884020.0 True False 884729.9384547777 982516.3667863157 840115.6732286495 765301.3450740667 830378.8804371469 925566.9119421302 842124.4586262974 896937.9019355839 864911.7597600488 876188.2705571539 1.009748667249554 1.1213530240042469 0.9588300841946146 0.8734439512496829 0.9477174122738741 1.0563561999678188 0.961122725474063 1.0236817041219186 0.987130036801412 1.0 19.740881376015853 -4.777868479001792 24.999692152809697 0.974541714925802 1.065550860346619 0.31759039540388867 0.05244992162910637 252.76114729352997 384620.16847728007 0.014481376976139286 0.030277361563795645 1.667752195305933e-05 4.777868479001792 0.09100914542081706 ANSFVGT(ph)AQYVSPELLTEK ddPTM_KYSE-520_SHP099_60min_R1 1 ANSFVGTAQYVSPELLTEK 19 0 Q6A1A2;E9PER6;O15530-4;O15530-5;O15530-2;O15530 Q6A1A2 PDPK2P;PDPK1 Putative 3-phosphoinositide-dependent protein kinase 2;3-phosphoinositide-dependent protein kinase 1 1 ANS(0.268)FVGT(0.732)AQYVSPELLTEK 292.65 4.106000000000001e-43 297780000.0 493980.0 545480.0 413660.0 402630.0 365680.0 479370.0 360750.0 495630.0 598520.0 493880.0 True False 466577.94467528374 519274.32201782754 440325.1854794012 440895.8341448761 394456.9355654138 476378.07401672663 397218.1305807155 493910.77521091216 489843.85546137753 489504.60743282567 0.953163540425535 1.0608160048607655 0.8995322593359383 0.9006980270464153 0.8058288514057446 0.9731840452229035 0.8114696461467432 1.0090012794796648 1.0006930435861086 1.0 18.90096291361043 -9.514565987721971 6.965968172237178 0.9999970131391306 0.932461476647759 0.05724986143489297 0.07864081065762761 0.0 0.0 0.07845970574189029 0.019029273772276128 3.05797557523018e-10 9.514565987721971 -0.06753553649137156 ANSTQSRLS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 ANSTQSRLSK 10 1 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 ANS(0.001)T(0.001)QS(0.005)RLS(0.993)K 49.928999999999995 0.05217 429320000.0 276170.0 297910.0 277100.0 258050.0 256470.0 249110.0 233930.0 245470.0 296650.0 243780.0 True False 260850.29956875363 283597.9564279735 294962.309375676 282574.99441443855 276652.72988531383 247555.21208733722 257577.92733678926 244618.52186312867 242785.83793794294 241620.29885797008 1.0795876869686656 1.1737339857967763 1.2207679187958522 1.1695002272161852 1.1449896022516577 1.0245629744579359 1.0660442378154638 1.0124088208620297 1.0048238458667664 1.0 17.88238213701187 -6.219311849122401 3.471156902716483 1.0236199483021926 1.1655967749708522 0.7749966438073921 0.03667953907636958 0.12037882955215042 3.0009053007787005 0.01358665903167713 0.01308009372191342 6.035151142060536e-07 6.219311849122401 0.14197682666865963 ANSTSDSVFTETPS(ph)PVLK ddPTM_KYSE-520_SHP099_60min_R1 4 ANSTSDSVFTETPSPVLK 18 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 ANSTSDSVFT(0.002)ET(0.298)PS(0.699)PVLK;ANSTSDSVFTETPS(1)PVLK;ANSTSDSVFTET(0.226)PS(0.774)PVLK;ANSTSDSVFTET(0.005)PS(0.995)PVLK 319.36 8.499700000000001e-48 2792170000.0 2210450.0 2713170.0 1920250.0 1754250.0 1900890.0 3130350.0 2525780.0 3116350.0 3597650.0 3670170.0 True False 2087831.9320771701 2582825.2406488038 2044032.3875086321 1920973.392565506 2050479.2284153884 3110812.3245056234 2781110.4916373054 3105540.1092115543 2944407.4493761673 3637655.149149055 0.5739499338098527 0.7100247645115552 0.5619093354648491 0.5280801268407406 0.5636815872705939 0.855169662037185 0.7645338487591056 0.8537203175892094 0.8094245684792147 1.0 21.794577350852872 -6.263156859351733 24.962682555121006 0.8416749692399805 0.5896084095526183 0.7745069004675534 0.07235697194554117 76.43626980591083 1110953.9963427212 0.02476623043886113 0.022980211873650274 5.455607787661959e-07 6.263156859351733 -0.25206655968736225 ANSWQLVET(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 5 ANSWQLVETPEK 12 0 Q9Y2H0-3;Q9Y2H0;F8WF49;A0A0B4J2C2;Q9Y2H0-1 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 ANSWQLVET(1)PEK;ANSWQLVET(1)PEK;ANSWQLVET(1)PEK;ANSWQLVET(1)PEK;ANSWQLVET(1)PEK 268.5 4.6559e-21 5688160000.0 5582460.0 6188670.0 4477410.0 3866500.0 4299540.0 5747380.0 4164030.0 5452780.0 6208960.0 5816190.0 True False 5272789.815441889 5891357.003816943 4766031.012709294 4233970.9974943865 4637889.336963791 5711508.469537641 4584970.789416533 5433865.578868424 5081569.3791443445 5764663.081527349 0.9146744121678768 1.0219776803080791 0.8267666202352513 0.7344698098770058 0.8045377971569124 0.9907792335409784 0.7953579809562338 0.9426163336901764 0.8815032738735499 1.0 22.458804860668053 -8.5010997937746 0.8412856817345506 1.000299572207865 0.8719188150943213 0.15442335798432705 0.08604425221074037 3.5220224930065918 3.961448936404585 0.09429542907466083 0.030772355057430454 3.154279738158573e-09 8.5010997937746 -0.12838075711354358 ANSWQLVET(ph)PEKR ddPTM_KYSE-520_SHP099_60min_R1 9 ANSWQLVETPEKR 13 1 Q9Y2H0-3;Q9Y2H0;F8WF49;A0A0B4J2C2;Q9Y2H0-1 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 ANSWQLVET(1)PEKR;ANSWQLVET(1)PEKR;ANSWQLVET(1)PEKR;ANSWQLVET(1)PEKR;ANSWQLVET(1)PEKR;ANSWQLVET(1)PEKR;ANSWQLVET(1)PEKR;ANS(0.001)WQLVET(0.999)PEKR;ANSWQLVET(1)PEKR 220.27 2.462e-11 39552880000.0 13088830.0 12799210.0 10819940.0 9565810.0 10806140.0 11803800.0 10459440.0 11549720.0 14113530.0 11922910.0 True False 12362766.50796428 12184316.739594107 11517410.644916113 10474941.70633435 11656521.739473967 11730128.105802706 11516782.269497298 11509656.717044918 11550868.725138368 11817282.293283602 1.0461598700227974 1.0310591248648693 0.9746243137021511 0.8864086891017086 0.9863961484696863 0.9926248535561826 0.9745711394271173 0.973968162170965 0.9774555975279823 1.0 23.494394950757624 -4.743692768256253 4.52474285000339 0.9679673943676008 1.041334160890691 0.4563310901646289 0.029730230265629255 0.1671503468351817 8.178513845966332 0.008118466668295389 0.021275441746149603 1.8042936959809687e-05 4.743692768256253 0.07336676652309015 ANT(ph)PELK ddPTM_KYSE-520_SHP099_60min_R1 2 ANTPELK 7 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 ANT(1)PELK;ANT(1)PELK 84.054 0.046446 792500000.0 4421400.0 5357900.0 3893600.0 3665700.0 3927500.0 5221300.0 4185900.0 5328400.0 5712900.0 5412800.0 True False 4176136.1281576203 5100498.441628137 4144587.685980271 4014087.0258671083 4236571.905581824 5188711.929957106 4609051.622447164 5309917.02405791 4675581.370489382 5364846.803094675 0.7784259796101997 0.9507258322243143 0.7725453937639923 0.7482202517976114 0.7896911246632404 0.9671687040465038 0.8591208270455112 0.9897611654064233 0.8715218797659432 1.0 22.355105543740976 -6.257287080634387 24.77476896271122 0.9319749840133166 0.8105731754926626 0.4837018578127711 0.06679357947846824 306.46473667360436 1828529.8379809156 0.022553149322083285 0.021777415829008946 5.529844503956424e-07 6.257287080634387 -0.12140180852065396 ANT(ph)PELKK ddPTM_KYSE-520_SHP099_60min_R1 4 ANTPELKK 8 1 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 ANT(1)PELKK;ANT(1)PELKK;ANT(1)PELKK;ANT(1)PELKK 134.13 0.0013387 11399000000.0 14384600.0 14916200.0 12116000.0 9424200.0 10232200.0 12841000.0 9705500.0 11579000.0 15256200.0 12609600.0 True False 13586657.563010825 14199603.362327356 12897016.746285422 10319873.134510962 11037415.926745854 12760854.555872912 10686626.656551983 11538835.15155892 12486058.657504972 12497888.754120344 1.0871162186118462 1.136160166063727 1.0319356332911422 0.825729316170195 0.883142436606103 1.0210408179274177 0.8550745543345296 0.9232627508990077 0.9990534323958139 1.0 23.575181067801775 -5.021968567815737 5.790292579594912 0.9249750362256262 1.106639290120422 0.5891685911059579 0.061768979279111 0.10811463491540746 12.37684001963079 0.016651574091675107 0.031401563951810776 9.506735964331494e-06 5.021968567815737 0.1816642538947959 ANT(ph)SGDFEKDDDAYKTEDSDDIHFEPVVQMPEK ddPTM_KYSE-520_SHP099_60min_R1 1 ANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEK 33 2 P49792;Q7Z3J3;J3KNE0;A6NKT7;J3KQ37;Q99666;O14715 P49792;Q99666 RANBP2;RGPD4;RGPD3;RGPD8;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 ANT(0.495)S(0.495)GDFEKDDDAYKT(0.005)EDS(0.005)DDIHFEPVVQMPEK 133.59 1.538e-05 1210200000.0 582730.0 607140.0 527270.0 574430.0 545560.0 570160.0 569460.0 495170.0 654850.0 461040.0 True False 550404.8052565451 577972.0830642807 561258.6678618288 629023.6544913227 588492.4681882164 566601.4199498864 627026.5741940237 493452.3708435471 535945.74742512 456955.5442836926 1.2045040532757738 1.2648321927470851 1.228256610260935 1.3765532826116773 1.2878549687163037 1.2399486712390606 1.3721828787019719 1.0798695343921598 1.1728618989955568 1.0 18.80169429144631 -7.69864635590653 1.335398781202123 1.0226673294376645 1.2805801291829138 0.5929312692572305 0.07138276671542469 0.2722094926658729 0.9446308540617915 0.06437699423265505 0.020544330551762902 2.0014910116010518e-08 7.69864635590653 0.2579127997452493 ANTLS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 ANTLSPVR 8 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 ANT(0.023)LS(0.977)PVR 102.42 0.0023075 1026200000.0 877430.0 929750.0 768930.0 631840.0 717870.0 1035400.0 790570.0 756860.0 993880.0 934880.0 True False 828757.2087866599 885083.4144167985 818496.4581314996 691889.8836303763 774362.284878429 1028937.6845378724 870488.5308196689 754234.6293124516 813416.4456759245 926597.6905256346 0.8944088866836347 0.9551970865745564 0.8833353099198726 0.7466993396431685 0.8357049589009374 1.1104470635515864 0.9394460397649638 0.8139828504046822 0.8778528740067275 1.0 19.821583561004665 ANTS(ph)GDFEKDDDAYKTEDSDDIHFEPVVQMPEK ddPTM_KYSE-520_SHP099_60min_R1 1 ANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEK 33 2 P49792;Q7Z3J3;J3KNE0;A6NKT7;J3KQ37;Q99666;O14715 P49792;Q99666 RANBP2;RGPD4;RGPD3;RGPD8;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 ANT(0.104)S(0.896)GDFEKDDDAYKTEDSDDIHFEPVVQMPEK 330.94 8.365099999999999e-82 900480000.0 284040.0 290670.0 242690.0 262970.0 266130.0 248130.0 231760.0 277580.0 283760.0 230970.0 True False 268283.734980298 276705.77689543506 258334.1857177295 287962.5897351867 287072.916927433 246581.32863084984 255188.5625596299 276617.13976765925 232236.33700748612 228923.78549194106 1.171934731044986 1.2087244508071273 1.1284724527972818 1.257897204156289 1.254010876635355 1.0771328462045302 1.1147315339524362 1.2083372602511728 1.0144701063213095 1.0 17.804507843090605 -7.775461268041867 0.6460632658765146 0.99418890877008 1.1952170924066743 0.518123821343413 0.06101815221469748 0.6180587140567668 0.602028107633779 0.0618193916542575 0.02747780186188159 1.6770218919784528e-08 7.775461268041867 0.20102818363659425 ANTSGDFEKDDDAYKT(ph)EDS(ph)DDIHFEPVVQMPEK ddPTM_KYSE-520_SHP099_60min_R1 2 ANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEK 33 2 P49792;Q7Z3J3;J3KNE0;A6NKT7;J3KQ37;Q99666;O14715 P49792;Q99666 RANBP2;RGPD4;RGPD3;RGPD8;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 2 ANTSGDFEKDDDAY(0.001)KT(0.999)EDS(1)DDIHFEPVVQMPEK;ANTSGDFEKDDDAY(0.014)KT(0.987)EDS(0.999)DDIHFEPVVQMPEK 204.91 1.4902e-15 841630000.0 729770.0 679640.0 625810.0 709870.0 690810.0 777460.0 766250.0 748410.0 863280.0 760990.0 True False 689288.2033395717 646989.0742395625 666150.7139314038 777335.8313698029 745172.8168287666 772607.5837558565 843710.0278793424 745813.9403902073 706530.1135178412 754248.2206412617 0.9138744838582967 0.8577933053517747 0.8831982571533846 1.0306100963803564 0.9879676165430272 1.02434127467876 1.11861056451949 0.9888176332137933 0.9367342131972807 1.0 19.524679862328437 -5.2571951539435355 24.146132230617823 1.0158742226726412 0.8822391267309229 0.6243843426185887 0.04524254404241436 147.66436708526825 840081.5593142324 0.013113558213509197 0.021697113615483262 5.531015124655285e-06 5.2571951539435355 -0.1336350959417183 ANTSGDFEKDDDAYKT(ph)EDSDDIHFEPVVQMPEK ddPTM_KYSE-520_SHP099_60min_R1 1 ANTSGDFEKDDDAYKTEDSDDIHFEPVVQMPEK 33 2 P49792;Q7Z3J3;J3KNE0;A6NKT7;J3KQ37;Q99666;O14715 P49792;Q99666 RANBP2;RGPD4;RGPD3;RGPD8;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 ANT(0.29)S(0.29)GDFEKDDDAY(0.057)KT(0.312)EDS(0.05)DDIHFEPVVQMPEK 63.257 0.022077 686910000.0 84120.0 85506.0 69458.0 77972.0 65518.0 68189.0 75956.0 75433.0 85117.0 75396.0 True False 79453.69591093737 81398.16341287747 73935.3738167293 85382.4354368634 70673.89385357358 67763.40715757481 83634.37373912353 75171.34052919461 69661.89842495839 74728.05009720032 1.063237911434733 1.0892584953976612 0.989392520219115 1.142575449590946 0.9457478652480104 0.9068001516088476 1.1191831398027725 1.005932048694134 0.9322054882249399 1.0 16.189362257639523 -5.777373065603702 24.999928408008827 0.9880760762211059 1.0665746067534188 0.29896294840834325 0.06436456477059817 347.0759401392564 544559.3647931564 0.020409461010047543 0.02321768080807381 1.6696557382874777e-06 5.777373065603702 0.07849853053231282 ANTTAFLT(ph)PLEIK ddPTM_KYSE-520_SHP099_60min_R1 1 ANTTAFLTPLEIK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 ANTTAFLT(1)PLEIK 137.32 6.5348e-05 77993000.0 172230.0 222090.0 168110.0 158650.0 158360.0 200450.0 144750.0 186270.0 245230.0 199260.0 True False 162676.05856800693 211420.46303611394 178946.63958551004 173728.04830013818 170822.0310548536 199198.9171968477 159382.7426238627 185623.87284574466 200702.41374522762 197494.71142193404 0.8236983025862428 1.0705120228988232 0.906083197353081 0.8796592427681772 0.8649448373830322 1.0086291210668055 0.8070228386184595 0.9398928786967458 1.0162419656718835 1.0 17.59145449528349 -7.660240928366168 4.833119452235387 1.0073098244411065 0.9132449097069631 0.21034635249968592 0.07545238460705939 0.3304322673079065 12.374973798274688 0.05451981649345378 0.018836364484522444 2.1865482821323402e-08 7.660240928366168 -0.09406491473414336 ANVS(ph)SPHR ddPTM_KYSE-520_SHP099_60min_R1 1 ANVSSPHR 8 0 Q92530;Q5QPM9;H0Y555;Q5QPM7 Q92530;Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.675)S(0.325)PHR 80.102 0.011045000000000001 272110000.0 255650.0 209420.0 220020.0 208270.0 282880.0 282290.0 279820.0 284080.0 280800.0 311490.0 True False 241468.58487435995 199359.1488541715 234202.84124444693 228063.91818134137 305141.04663296975 280528.1233998413 308106.9363800295 283094.5927847702 229813.7983919581 308730.44093555317 0.7821340329856427 0.6457385551293509 0.7585997692185342 0.7387153579356602 0.9883736948915488 0.9086506745164172 0.9979804241083766 0.9169636525860616 0.7443833452106242 1.0 18.235988214667387 -5.746562475666307 23.43955901703848 0.9246324664795522 0.7271356291452317 0.6077600561517456 0.07661690371622165 77.30491358844131 121797.65646436531 0.022612228096909125 0.02904188850401784 1.792410685614851e-06 5.746562475666307 -0.19749683733432055 ANVS(ph)SPHREFPPATAR ddPTM_KYSE-520_SHP099_60min_R1 10 ANVSSPHREFPPATAR 16 1 Q92530;Q5QPM9;H0Y555;Q5QPM7 Q92530;Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.5)S(0.5)PHREFPPATAR;ANVS(0.588)S(0.412)PHREFPPATAR;ANVS(0.671)S(0.329)PHREFPPATAR;ANVS(0.5)S(0.5)PHREFPPATAR;ANVS(0.5)S(0.5)PHREFPPATAR;ANVS(0.613)S(0.387)PHREFPPATAR;ANVS(0.5)S(0.5)PHREFPPATAR;ANVS(0.5)S(0.5)PHREFPPATAR;ANVS(0.753)S(0.247)PHREFPPATAR;ANVS(0.5)S(0.5)PHREFPPATAR 137.05 1.2868e-05 26555300000.0 5510355.0 5713300.0 5649350.0 5172270.0 4725589.0 4637899.0 4532817.0 4628060.0 6636080.0 5022902.0 True False 5204684.623529635 5438824.492161862 6013516.1402796 5663840.985700315 5097465.969376582 4608952.15199972 4991038.3783908095 4612006.340057324 5431135.1539633395 4978402.996038621 1.045452653726721 1.092483773710084 1.2079207217785768 1.1376823029809169 1.023915897012094 0.9257892853726631 1.0025380392793115 0.9264027728826204 1.0909392345868671 1.0 22.24725158888658 -5.872988173407021 4.369053461373063 0.984483482361293 1.1248079189847662 0.5369787791385556 0.05775733147514705 0.16342262902780033 5.466325578208058 0.018484398833795185 0.021286984957062084 1.3397131696454786e-06 5.872988173407021 0.14032443662347316 ANVSS(ph)PHR ddPTM_KYSE-520_SHP099_60min_R1 7 ANVSSPHR 8 0 Q92530;Q5QPM9;H0Y555;Q5QPM7 Q92530;Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.071)S(0.929)PHR;ANVS(0.012)S(0.988)PHR;ANVS(0.032)S(0.968)PHR;ANVS(0.026)S(0.974)PHR;ANVS(0.029)S(0.971)PHR;ANVS(0.36)S(0.64)PHR;ANVS(0.124)S(0.876)PHR 108.9 0.0012032 33299990000.0 2633080.0 2404650.0 2202730.0 2577060.0 2621670.0 2699060.0 2760150.0 2628780.0 2781700.0 2676610.0 True False 2487017.803485151 2289127.004546766 2344721.5002926122 2821983.0075786556 2827980.5137381824 2682214.1653745305 3039172.8984680804 2619661.375741867 2276613.4009505357 2652897.3177710664 0.93747232010273 0.8628781028245994 0.8838342458963395 1.063736236104929 1.0659969742493534 1.0110508791301789 1.1456051759370613 0.9874718324729115 0.8581611454390251 1.0 21.339137405460196 -5.253178794897204 24.63498661921607 1.0252579831565096 0.891543197091006 0.38676552183106405 0.07127639543376228 517.885511226246 1544451.0721373574 0.020249528519691144 0.034316277179767644 5.5824032520346196e-06 5.253178794897204 -0.13371478606550358 ANVSS(ph)PHREFPPATAR ddPTM_KYSE-520_SHP099_60min_R1 4 ANVSSPHREFPPATAR 16 1 Q92530;Q5QPM9;H0Y555;Q5QPM7 Q92530;Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.478)S(0.522)PHREFPPATAR;ANVS(0.167)S(0.833)PHREFPPATAR;ANVS(0.407)S(0.592)PHREFPPATAR;ANVS(0.206)S(0.794)PHREFPPATAR 115.76 0.00011983 6557870000.0 1586275.0 1457510.0 1417340.0 1127613.0 1391294.0 1243996.0 1004561.0 1304475.0 1727810.0 1342056.0 True False 1498281.163589183 1387489.0318328883 1508704.004224181 1234781.0004907902 1500780.9224200032 1236231.7595271145 1106111.8294505726 1299950.0806917546 1414083.2585456187 1330166.4279437696 1.126386241686533 1.0430943096178802 1.1342219834524034 0.9282906067623204 1.1282655244426647 0.9293812665518377 0.8315589735341986 0.9772837844819728 1.0630874669807833 1.0 20.343175333657996 -6.274588865978366 24.564487655204516 0.9507985703542002 1.0659101620375009 0.3302115725383866 0.07879060216903509 752.4476829591239 1405639.319277715 0.028035928693968242 0.02486967804126059 5.313872551362738e-07 6.274588865978366 0.11511159168330065 ANVSSPHREFPPAT(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 1 ANVSSPHREFPPATAR 16 1 Q92530;Q5QPM9;H0Y555;Q5QPM7 Q92530;Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 1 ANVS(0.061)S(0.364)PHREFPPAT(0.575)AR 78.32600000000001 0.034413 609360000.0 845250.0 719400.0 776740.0 584530.0 582480.0 580770.0 609480.0 643980.0 941580.0 696900.0 True False 798362.2975358982 684838.9441585845 826809.9032279412 640083.5554546473 628317.8621421526 577145.1990043069 671092.1863515853 641746.1836860615 770612.8073002142 690726.0081799959 1.1558306594528194 0.9914769909462026 1.1970157391445484 0.9266822848342033 0.9096484781248017 0.8355631497430295 0.9715750940374404 0.9290893582782671 1.1156562778499004 1.0 19.397754021476953 -5.27988230327851 24.637275660845294 0.9462716574847962 1.1024447197832736 0.4253253866548059 0.08402519702595733 625.1402766714956 835102.3899638096 0.023527463524605385 0.03497952670679808 5.249497058702048e-06 5.27988230327851 0.15617306229847738 ANVT(ph)PQS(ph)SSELRPTTTAALASGVEAK ddPTM_KYSE-520_SHP099_60min_R1 3 ANVTPQSSSELRPTTTAALASGVEAK 26 1 Q15147-2;Q15147;Q15147-5;Q15147-4 Q15147-2 PLCB4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 2 ANVT(1)PQS(0.5)S(0.426)S(0.074)ELRPTTTAALASGVEAK;ANVT(0.998)PQS(0.511)S(0.444)S(0.046)ELRPTTTAALASGVEAK;ANVT(0.999)PQS(0.376)S(0.332)S(0.293)ELRPTTTAALASGVEAK 150.77 6.973000000000001e-07 2537650000.0 1770510.0 1711800.0 1687990.0 1947740.0 1978770.0 1492310.0 1796110.0 2180050.0 2313030.0 1868990.0 True False 1672296.280875817 1629562.5585358168 1796800.5362794923 2132852.6239906168 2134487.9413388055 1482995.939745712 1977678.327144363 2172487.9153774977 1893042.0587412778 1852432.2026522176 0.9027570771451223 0.879688096656219 0.9699683117724499 1.1513795867599945 1.1522623814694837 0.8005669182507378 1.0676117184277105 1.172775938718319 1.0219224520233006 1.0 20.82098931148427 -4.998636516738375 5.292523457179752 1.0546686348535481 0.8965511960710185 0.2922544832895081 0.10102152794115914 0.21677010771512562 19.638648363429986 0.028441107561868014 0.05676590536390875 1.003144469738265e-05 4.998636516738375 -0.1581174387825296 ANVT(ph)PQSS(ph)SELRPTTTAALASGVEAK ddPTM_KYSE-520_SHP099_60min_R1 2 ANVTPQSSSELRPTTTAALASGVEAK 26 1 Q15147-2;Q15147;Q15147-5;Q15147-4 Q15147-2 PLCB4 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 2 ANVT(0.998)PQS(0.127)S(0.749)S(0.125)ELRPTTTAALASGVEAK;ANVT(1)PQS(0.047)S(0.811)S(0.142)ELRPTTTAALASGVEAK 202.56 7.2659e-16 2511120000.0 2179190.0 2353900.0 2387800.0 2170800.0 2256100.0 1763250.0 2235400.0 2590900.0 2774300.0 2304600.0 True False 2058305.9865924367 2240815.110724069 2541721.4086150844 2377112.1793251806 2433642.234546954 1752244.902705623 2461376.047401607 2581912.7726206034 2270557.0544117144 2284183.036951671 0.9011125436511972 0.9810138130237243 1.1127485702753086 1.0406837547036192 1.065432233396997 0.7671210556944073 1.0775739104894182 1.1303440796348196 0.994034636314373 1.0 21.12324683119921 -4.387420849664009 3.950515742422309 1.0241693381575805 0.9024572667432199 0.12985143814219413 0.09584561253489682 0.49321929992450575 12.0591565539887 0.025086713564698306 0.12720129399929986 4.09806790452874e-05 4.387420849664009 -0.12171207141436058 ANVVTT(ph)PSTNRK ddPTM_KYSE-520_SHP099_60min_R1 4 ANVVTTPSTNRK 12 1 Q8IWZ3-6;H0Y4P6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;E9PDP5 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 ANVVT(0.039)T(0.895)PS(0.032)T(0.034)NRK;ANVVT(0.021)T(0.805)PS(0.05)T(0.123)NRK;ANVVT(0.009)T(0.552)PS(0.237)T(0.201)NRK;ANVVT(0.157)T(0.717)PS(0.1)T(0.026)NRK 176.58 1.3861000000000002e-06 2770030000.0 6494400.0 6877100.0 5910800.0 4710200.0 4681460.0 6058700.0 4568390.0 5427900.0 7105100.0 5679000.0 True False 6134142.685734565 6546713.793262449 6291819.625614379 5157855.991826732 5049864.268136248 6020885.405939346 5030207.444389832 5409071.881781382 5814992.944995385 5628688.478195144 1.0897996415146245 1.163097552586828 1.1178127284869512 0.9163512977859123 0.8971653499210002 1.0696782082120064 0.8936730934526302 0.960982634362422 1.033099090049478 1.0 22.424367373259212 -5.246847457369062 21.766030176497406 0.963931191459265 1.12752289746434 0.6173538580905275 0.05631775583716338 91.10350957608087 135892.2216351573 0.015135491356649464 0.02599534312719881 5.6643821121124324e-06 5.246847457369062 0.1635917060050751 APAASEGNHTDGAEEAAGSCAQAPSHS(ph)PPNKPK ddPTM_KYSE-520_SHP099_60min_R1 2 APAASEGNHTDGAEEAAGSCAQAPSHSPPNKPK 33 1 Q92560;F8W6N3 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 APAASEGNHTDGAEEAAGSCAQAPS(0.013)HS(0.987)PPNKPK;APAASEGNHTDGAEEAAGSCAQAPS(0.016)HS(0.984)PPNKPK 231.33 8.3486e-24 1477290000.0 263500.0 381040.0 353390.0 850740.0 295480.0 290750.0 298940.0 256400.0 368690.0 237370.0 True False 248883.12972577263 362734.26644729957 376170.0848439918 931594.0738156916 318732.59494877636 288935.32140176353 329159.77257324726 255510.60824420975 301745.18991855835 235267.08647106553 1.0578748326378482 1.5417977579788267 1.5989065469651034 3.9597297173579116 1.354769167798471 1.2281162050149264 1.3990897643633173 1.0860448525834654 1.2825644013561102 1.0 17.84393997814266 -5.970603537098759 24.999997207785906 1.2253015057957677 2.0581327590113756 0.23621461620781248 0.720952145684315 327.0555967314601 278140.5282591007 0.2340796989699253 0.2654180913236805 1.0700312538610305e-06 5.970603537098759 0.8328312532156079 APAGPSLEETSVSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 APAGPSLEETSVSSPK 16 0 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 APAGPSLEETSVS(0.002)S(0.998)PK 206.19 4.5229000000000003e-14 0.0 722220.0 867170.0 623740.0 441540.0 530130.0 716820.0 460900.0 610500.0 628200.0 683410.0 True False 682157.0168901229 825509.8515512935 663947.2784192852 483503.8288461584 571848.2149729077 712346.0604891212 507492.2699505241 608382.3179917706 514134.71563329094 677355.5190849344 1.0070885933160698 1.2187246258309175 0.980205017471825 0.7138110124198033 0.8442364443201694 1.0516575718633796 0.7492258579897819 0.8981728218789118 0.7590322971426516 1.0 19.369553724772594 -4.997179356226008 9.149417220482972 0.8570835486362465 1.1100382506035829 0.45455032042802856 0.11150203927616054 0.0875095483720096 101.40218005419288 0.028389546660966172 0.0562658826987976 1.0065159090750205e-05 4.997179356226008 0.2529547019673364 APAKES(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 7 APAKESPPK 9 1 A0A0J9YWL0;Q9Y4K1;A0A494C1M5 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 APAKES(1)PPK;APAKES(1)PPK;APAKES(1)PPK;APAKES(1)PPK;APAKES(1)PPK;APAKES(1)PPK;APAKES(1)PPK 97.175 0.0046563 9906400000.0 12313050.0 11090130.0 9556190.0 7693810.0 8331700.0 10869660.0 9016440.0 10305920.0 12171500.0 10952140.0 True False 11630020.571043367 10557343.5081755 10172197.297844607 8425027.389171671 8987357.389111679 10801818.420044348 9927909.74717445 10270171.168939818 9961462.418545999 10855112.560235983 1.071386455599364 0.9725687734320454 0.9370881454612453 0.776134502744255 0.8279377426295706 0.9950904110946891 0.9145837679787839 0.9461137424370062 0.9176747236170016 1.0 23.371871350022015 -4.429677323087821 2.172923495514732 0.9072185604060692 1.0844586401271605 0.3557257787091016 0.06490524584369796 0.5186772283655819 3.6168439858515273 0.018545228493652317 0.15498940849093837 3.718113790221048e-05 4.429677323087821 0.17724007972109135 APAKES(ph)PPKR ddPTM_KYSE-520_SHP099_60min_R1 2 APAKESPPKR 10 2 A0A0J9YWL0;Q9Y4K1;A0A494C1M5 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 APAKES(1)PPKR;APAKES(1)PPKR 62.891000000000005 0.020638999999999998 1419850000.0 1837370.0 1689160.0 1505100.0 1495020.0 1646400.0 1787390.0 1586410.0 1575200.0 1841310.0 1611530.0 True False 1735447.4233937114 1608010.2181191472 1602121.1542451442 1637106.2513058467 1775962.3132654175 1776234.2360113447 1746779.804669585 1569735.9988544434 1506974.5196477808 1597253.0979513673 1.0865199921162099 1.0067347624378233 1.0030477676330825 1.0249510571653266 1.1118853458749036 1.1120555898683422 1.0936149110682587 0.9827722362021291 0.9434788522749603 1.0 20.607161507137686 -7.36121784660541 5.8736814945878875 0.9697453991012747 1.0604249500497382 0.4964737940006677 0.040244759418013656 0.22596027417032727 10.946829099935167 0.0257332015051465 0.012076311751788079 4.352934712048969e-08 7.36121784660541 0.09067955094846358 APAPLGTVADSLRAS(ph)DGQLQAK ddPTM_KYSE-520_SHP099_60min_R1 3 APAPLGTVADSLRASDGQLQAK 22 1 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 APAPLGT(0.001)VADS(0.076)LRAS(0.923)DGQLQAK;APAPLGT(0.005)VADS(0.207)LRAS(0.788)DGQLQAK;APAPLGTVADS(0.036)LRAS(0.964)DGQLQAK 89.039 0.0018951 1207360000.0 2063830.0 2077570.0 1977170.0 1362440.0 1704750.0 1811550.0 1573180.0 1873990.0 2395640.0 1752240.0 True False 1949345.2357568922 1977760.4187038555 2104621.5417838497 1491925.8879674766 1838904.126299329 1800243.4444896462 1732212.3871572276 1867489.5660825553 1960652.165169909 1736716.5168220925 1.122431448584295 1.1387928885036656 1.2118394230711662 0.8590497490617854 1.0588395449040948 1.036578754823958 0.9974065256930321 1.0752990185754416 1.128941969618382 1.0 20.727930852358153 -5.216252749336507 24.999984703114276 1.0265193626310287 1.155798427042648 0.44336340984798883 0.06939433028955769 433.3567511844078 239758.63063490432 0.018912314964795517 0.03275695822209987 6.077811837503512e-06 5.216252749336507 0.1292790644116193 APAPPPKPET(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 2 APAPPPKPETPEK 13 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 APAPPPKPET(1)PEK;APAPPPKPET(1)PEK 116.35 0.0003398 1682760000.0 1921350.0 1999000.0 1367810.0 1544170.0 1489740.0 2090200.0 1799410.0 2579500.0 2029370.0 2617300.0 True False 1814768.8853837303 1902965.0394398272 1455981.2211733812 1690927.4525283596 1606974.0625388855 2077154.2864796782 1981311.923349257 2570552.316559826 1660887.5642545873 2594112.75822859 0.6995720905451155 0.7335706720548577 0.5612636600143817 0.6518326727181368 0.6194696269240896 0.8007185809062823 0.7637724756044187 0.9909177264581004 0.6402526486122128 1.0 21.306809759862762 -6.519053538255686 1.9756652943499704 0.8545210420039228 0.6522788336914699 0.43613462322673924 0.10627639762375157 0.3189932670062155 2.5020786023351165 0.04548673988022422 0.034824676732139126 3.0265403041418803e-07 6.519053538255686 -0.20224220831245288 APAPPVLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 APAPPVLSPK 10 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 APAPPVLS(1)PK;APAPPVLS(1)PK 103.43 0.0016219000000000001 1616310000.0 1484470.0 1543620.0 1356340.0 1095340.0 1380940.0 1872820.0 1447350.0 2167470.0 2121720.0 2287300.0 True False 1402123.489882421 1469462.1781791418 1443771.8466207287 1199440.7842740202 1489612.1215262034 1861131.035692696 1593662.262774771 2159951.552461304 1736469.1322086372 2267036.3014924703 0.6184830339767181 0.6481864349555156 0.6368543131268972 0.5290787727944126 0.6570746664028004 0.8209533453290746 0.7029716558687688 0.9527644312706114 0.7659644140084824 1.0 21.112376062107263 -7.023926846160567 0.5898904934145248 0.9672749058008425 0.5977515314287093 0.7148349792410043 0.07668350118794043 0.4229918853481811 0.30134520493576405 0.07124837156747953 0.04585301715928061 9.463965617599141e-08 7.023926846160567 -0.36952337437213323 APAPVVLGS(ph)PVVLGPPVGQAR ddPTM_KYSE-520_SHP099_60min_R1 2 APAPVVLGSPVVLGPPVGQAR 21 0 A0A0C4DFM2;Q6ZN55;Q6ZN55-2 A0A0C4DFM2 ZNF574 Zinc finger protein 574 1 APAPVVLGS(1)PVVLGPPVGQAR;APAPVVLGS(1)PVVLGPPVGQAR 185.85 4.3828000000000003e-13 126194000.0 210795.0 198540.0 150518.0 146387.0 143144.0 186449.0 136675.0 187734.0 214162.0 185526.0 True False 199101.7811405856 189001.84038538425 160220.63111731494 160299.57646714355 154408.61842205081 185285.30263125518 150491.44281945718 187082.79457144486 175275.5793846816 183882.3839770439 1.0827670211489193 1.0278409290635446 0.8713212633642876 0.8717505886107912 0.839714033951873 1.0076294347716659 0.8184114191071435 1.017404661203438 0.9531939688500188 1.0 17.48842374991106 -4.609781353967496 4.879282552320317 0.9179698926425328 1.0706568828830876 0.3858997174587466 0.06824601456759335 0.18245273136420928 7.31440252947164 0.017326863166939065 0.04969046129618324 2.4559450527179108e-05 4.609781353967496 0.15268699024055477 APDPEGLARPVS(ph)PDS(ph)PEIISELQQYADVAAAR ddPTM_KYSE-520_SHP099_60min_R1 6 APDPEGLARPVSPDSPEIISELQQYADVAAAR 32 1 H0Y760;Q9Y4B4 H0Y760 RAD54L2 Helicase ARIP4 2 APDPEGLARPVS(1)PDS(1)PEIISELQQYADVAAAR;APDPEGLARPVS(1)PDS(1)PEIISELQQYADVAAAR;APDPEGLARPVS(1)PDS(1)PEIISELQQYADVAAAR;APDPEGLARPVS(1)PDS(1)PEIISELQQYADVAAAR;APDPEGLARPVS(0.999)PDS(0.992)PEIIS(0.006)ELQQY(0.004)ADVAAAR;APDPEGLARPVS(1)PDS(1)PEIISELQQYADVAAAR 155.2 2.4308000000000003e-07 1045072000.0 127531.2 125961.0 107639.0 106869.0 113262.1 119397.5 121385.0 106205.0 138478.0 125669.3 True False 120456.7901088558 119909.64448868451 114577.5821684892 117025.79762866345 122175.18289680441 118652.29591424626 133655.7804034376 105836.59964343326 113333.88594630203 124555.96777123588 0.9670896727332344 0.9626969035230413 0.919888337899045 0.939543883144944 0.9808858225179213 0.9526022561373172 1.0730580219882742 0.8497111903768167 0.9099032986878257 1.0 16.926434620605757 -10.235621459072416 4.756747942276862 1.0000112586809464 0.9513095463708877 0.06973636882865553 0.05407423534023086 6.535643044831862e-06 1.0502969507791361e-06 0.05299995852223327 0.0128514067450003 5.812708456442619e-11 10.235621459072416 -0.04870171231005871 APDPEGLARPVS(ph)PDSPEIISELQQYADVAAAR ddPTM_KYSE-520_SHP099_60min_R1 3 APDPEGLARPVSPDSPEIISELQQYADVAAAR 32 1 H0Y760;Q9Y4B4 H0Y760 RAD54L2 Helicase ARIP4 1 APDPEGLARPVS(0.998)PDS(0.002)PEIISELQQYADVAAAR;APDPEGLARPVS(0.985)PDS(0.015)PEIISELQQYADVAAAR;APDPEGLARPVS(0.982)PDS(0.018)PEIISELQQYADVAAAR 149.68 6.3329e-07 266453000.0 14340.3 17956.2 11843.9 12692.0 7623.1 15522.5 8428.7 13037.9 16815.7 16111.4 True False 13544.814972320683 17093.557199194307 12607.37674491003 13898.24386401105 8222.994600494163 15425.618319720988 9280.755252184816 12992.67456796873 13762.392769300763 15968.665530479535 0.8482120779890826 1.0704436865164269 0.7895072209287757 0.8703447283984593 0.5149456342985492 0.965992949772664 0.5811853992727541 0.813635587968794 0.861837374139521 1.0 13.962956134189573 -4.8257855101062335 11.096161768588667 0.7833629001755541 0.9591536205425696 0.1425093753329696 0.15250473672197595 0.7597286442289103 127.63144322233393 0.03745629762942446 0.07811887973982982 1.493531854811289e-05 4.8257855101062335 0.17579072036701548 APELPNTSSS(ph)PSLK ddPTM_KYSE-520_SHP099_60min_R1 3 APELPNTSSSPSLK 14 0 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 APELPNT(0.001)S(0.001)S(0.128)S(0.869)PS(0.001)LK;APELPNTSS(0.095)S(0.904)PSLK;APELPNTSS(0.019)S(0.981)PSLK 279.29 1.2284e-25 1073520000.0 2297820.0 2779920.0 1752480.0 1496090.0 1668480.0 2321400.0 1710640.0 2161290.0 2586130.0 2284940.0 True False 2170355.3440093943 2646368.470455007 1865447.6648671406 1638277.943784138 1799779.8836474027 2306911.2815203927 1883568.1854375436 2153792.989438877 2116553.9830320315 2264697.20925642 0.9583423934725467 1.1685308127014045 0.8237073182421737 0.7233982260798751 0.7947110440597638 1.0186400513461282 0.831708617707877 0.9510291179923532 0.9345858573857522 1.0 21.11088674369928 -4.771373749333196 24.99041126677106 0.876886696173404 1.0634366206422614 0.3330566833208146 0.10067149189766526 196.15439325341035 493439.85796362953 0.02703688169441656 0.05736027183209182 1.6928802981299472e-05 4.771373749333196 0.18654992446885743 APEPDLMS(ph)PTRK ddPTM_KYSE-520_SHP099_60min_R1 1 APEPDLMSPTRK 12 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 APEPDLMS(0.95)PT(0.05)RK 62.162 0.045581 0.0 177970.0 224420.0 160180.0 122180.0 189730.0 197670.0 158180.0 178840.0 280690.0 235450.0 True False 168097.64932560074 213638.52633871243 170505.4590970615 133791.9504652437 204660.67158396964 196436.26820803652 174170.37808803187 178219.64578156965 229723.77161908385 233364.09617732797 0.7203235291082105 0.9154729876543368 0.7306413535332289 0.5733184866774805 0.8770015393818453 0.8417587427792198 0.7463460786859167 0.7636977954232714 0.9844006656641906 1.0 17.832223089246515 -7.7687712368906885 9.889106244321821 0.9928355709330349 0.7729641740992377 0.4906208233496715 0.0901113991660894 0.14404147553016647 145.00937613010154 0.07766980839239075 0.02339159741242362 1.703055350658341e-08 7.7687712368906885 -0.2198713968337972 APFDLFENR ddPTM_KYSE-520_SHP099_60min_R1 1 APFDLFENR 9 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 96.03399999999999 0.023905000000000003 77292000.0 76011.0 82283.0 58068.0 70086.0 82652.0 81891.0 72951.0 76190.0 80081.0 70055.0 False True 71794.5183058282 78330.0011706991 61811.156192085 76746.95236787565 89156.24217444917 81379.88789307591 80325.5990131496 75925.7146728797 65540.30907772941 69434.3672019653 1.0339911084232665 1.1281157203155445 0.8902098295544842 1.1053165091090997 1.284036216750106 1.1720404631378638 1.1568564998872204 1.0934889699798496 0.9439174247399827 1.0 16.083362294794316 -4.235812099441243 21.22741829391609 1.094496659434171 1.033990519932707 0.014600979160600769 0.10973249178241483 4877.06332217356 4039228.3093702607 0.028990944402314308 1.4566932488035893 5.810157436918437e-05 4.235812099441243 -0.060506139501463885 APGAPPRS(ph)PPQR ddPTM_KYSE-520_SHP099_60min_R1 7 APGAPPRSPPQR 12 1 H3BN50;Q15599-3 H3BN50 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 APGAPPRS(1)PPQR;APGAPPRS(1)PPQR;APGAPPRS(1)PPQR;APGAPPRS(1)PPQR;APGAPPRS(1)PPQR;APGAPPRS(1)PPQR;APGAPPRS(1)PPQR 82.65100000000001 0.0043422 8438340000.0 3290550.0 3382550.0 3455450.0 2637310.0 3176630.0 3087890.0 2893150.0 2868320.0 3886750.0 3427370.0 True False 3108016.631951198 3220047.2206889368 3678193.8359154784 2887959.149463836 3426612.7084477157 3068617.3331153644 3185617.8364229975 2858370.467390922 3181014.1769941053 3397006.16825351 0.9149281685140745 0.9479073811468667 1.0827751419146037 0.8501483383966335 1.008715480257555 0.9033299267434128 0.9377721672082825 0.8414381151567014 0.9364169564135788 1.0 21.695832407176457 -6.299106877897836 24.878649687872308 0.9147551041895846 0.9607919399943122 0.06255199371807496 0.06742381114376404 1312.3013676289313 866745.2323374226 0.02295640340033865 0.020246154213733793 5.022189805050225e-07 6.299106877897836 0.046036835804727616 APGPRDT(ph)DDDEEEPDPYGFIVQTAEIAEIAR ddPTM_KYSE-520_SHP099_60min_R1 11 APGPRDTDDDEEEPDPYGFIVQTAEIAEIAR 31 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 APGPRDT(1)DDDEEEPDPYGFIVQTAEIAEIAR;APGPRDT(1)DDDEEEPDPYGFIVQTAEIAEIAR;APGPRDT(1)DDDEEEPDPYGFIVQTAEIAEIAR;APGPRDT(1)DDDEEEPDPYGFIVQTAEIAEIAR;APGPRDT(1)DDDEEEPDPYGFIVQTAEIAEIAR;APGPRDT(1)DDDEEEPDPYGFIVQTAEIAEIAR;APGPRDT(1)DDDEEEPDPYGFIVQTAEIAEIAR;APGPRDT(1)DDDEEEPDPYGFIVQTAEIAEIAR;APGPRDT(1)DDDEEEPDPYGFIVQTAEIAEIAR;APGPRDT(1)DDDEEEPDPYGFIVQTAEIAEIAR;APGPRDT(1)DDDEEEPDPYGFIVQTAEIAEIAR 241.41 1.2486e-30 1981941000.0 356503.7 341785.8 323938.2 310126.8 275060.9 317652.5 274643.1 305976.0 440343.6 282914.8 True False 336727.72908849356 325365.8971370553 344819.7746914461 339601.1578289772 296706.6279475631 315669.91292028764 302406.7048063545 304914.6406713351 360388.3023988213 280408.39497638406 1.2008475321034975 1.160328659790865 1.2297056039298921 1.2110948313711447 1.0581231991023365 1.1257505787117155 1.0784509673179474 1.08739483601058 1.2852265083902823 1.0 18.097170016401247 -5.744661646839936 24.995562043942712 1.1098217301743842 1.1997117513556328 0.3005774135493726 0.07058522410786446 325.95804821403584 485612.1679684409 0.020307012753866815 0.026143298523379172 1.8002729380480213e-06 5.744661646839936 0.08989002118124856 APGPS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 3 APGPSPAK 8 0 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 APGPS(1)PAK;APGPS(1)PAK;APGPS(1)PAK 83.647 0.013938999999999998 1411970000.0 2622200.0 2538640.0 2143640.0 2129600.0 2138470.0 2604990.0 2278940.0 2499750.0 2719900.0 2697860.0 True False 2476741.3387738937 2416679.9238236723 2281822.46434527 2331996.5437124125 2306755.4227701 2588731.2911380245 2509317.4955110587 2491078.9506960385 2226034.723099312 2673959.05930332 0.9262450485757213 0.9037834425383162 0.8533498134185277 0.8721137803508467 0.8626741739909466 0.9681267490357534 0.9384277918469113 0.9316069900281385 0.8324864643512113 1.0 21.35054594597749 -6.24741387589161 24.96239413888864 0.930123674836663 0.8824303229560082 0.24240901980590024 0.044327438528822184 1265.951271214588 2253124.29643725 0.014739223478369288 0.014674469633345805 5.656999288378451e-07 6.24741387589161 -0.04769335188065482 APGRPQLS(ph)PGQK ddPTM_KYSE-520_SHP099_60min_R1 4 APGRPQLSPGQK 12 1 B1ALB7;P19878-2;P19878-4;P19878-3;P19878 B1ALB7 NCF2 Neutrophil cytosol factor 2 1 APGRPQLS(1)PGQK;APGRPQLS(1)PGQK;APGRPQLS(1)PGQK;APGRPQLS(1)PGQK 162.94 5.2637e-06 2431850000.0 2657750.0 2339460.0 2282310.0 1901150.0 2037750.0 2420890.0 2089530.0 2053590.0 2555790.0 2284200.0 True False 2510319.309406728 2227068.829998951 2429431.3544251164 2081834.724398408 2198109.3317885105 2405780.327526451 2300760.0842475975 2046466.5756015105 2091722.9622228758 2263963.7650807067 1.1088160279443515 0.9837033897579008 1.0730875608066595 0.9195530231130683 0.9709118872360359 1.0626408269571792 1.0162530512786627 0.9039307992319202 0.9239206892290122 1.0 21.110419437230405 -1.0000000000004696 0.5835896147869153 0.9715234062852828 7.9302652752534515 0.3306281337763308 0.05416710688285469 206.9271495727854 1.6994234163823603 0.026513799228586883 1826.4738468188336 0.09999999999989187 1.0000000000004696 6.958741868968168 APGS(ph)PAAPR ddPTM_KYSE-520_SHP099_60min_R1 1 APGSPAAPR 9 0 Q5SPY9;Q9NQX5 Q5SPY9 NPDC1 Neural proliferation differentiation and control protein 1 1 APGS(1)PAAPR 87.258 0.0071087 0.0 125790.0 149750.0 172950.0 154910.0 118400.0 162860.0 127370.0 138860.0 157860.0 137060.0 True False 118812.17794385173 142555.78522066757 184098.63372978405 169632.59982461 127717.40639615252 161843.53033015024 140245.80261140855 138378.3270701677 129196.60332676099 135845.75503106634 0.8746108990794801 1.0493944782305986 1.3552034341277932 1.2487147631946025 0.9401648683607746 1.191377163704074 1.0323900263157724 1.018642997262021 0.9510536659552978 1.0 17.051609958720924 -6.950552952599218 6.633329985502134 0.9955176642939013 1.1169879800737952 0.1436275758604748 0.13295690469166735 0.4152070165454423 41.797442354425606 0.06023649503490511 0.04016205039245494 1.1205907865639197e-07 6.950552952599218 0.12147031577989387 APGT(ph)PHS(ph)HTKPYVR ddPTM_KYSE-520_SHP099_60min_R1 2 APGTPHSHTKPYVR 14 1 J3QQ67;Q07020;F8VUA6;F8VYV2;H0YHA7;Q07020-2 J3QQ67 RPL18 60S ribosomal protein L18 2 APGT(1)PHS(0.997)HT(0.003)KPYVR;APGT(1)PHS(0.998)HT(0.002)KPYVR 143.67 7.2123e-05 2006470000.0 1166680.0 1193970.0 1237170.0 1023560.0 935810.0 925680.0 961810.0 1080990.0 1301700.0 905380.0 True False 1101961.9346810803 1136609.8890144918 1316919.9577419898 1120838.8346554653 1009452.9229694536 919902.4877564382 1059039.1411610192 1077240.297994962 1065344.0931866516 897359.0375749811 1.2280056126241476 1.2666166399639336 1.4675507824614193 1.2490416742048032 1.1249153133815808 1.0251219960322442 1.180173260440951 1.2004562866008361 1.187199380156278 1.0 19.775325804165107 -5.627255539931416 4.206981589775677 1.1284084095093965 1.3212267162999398 0.5356041604066928 0.08497441458612646 0.1824178682009419 5.82981583249043 0.02656684926156833 0.03486045361933814 2.3590897305755134e-06 5.627255539931416 0.19281830679054335 APGT(ph)PHSHTKPYVR ddPTM_KYSE-520_SHP099_60min_R1 2 APGTPHSHTKPYVR 14 1 J3QQ67;Q07020;F8VUA6;F8VYV2;H0YHA7;Q07020-2 J3QQ67 RPL18 60S ribosomal protein L18 1 APGT(1)PHSHTKPYVR;APGT(1)PHSHTKPYVR 163.7 6.6603e-08 10426800000.0 3593100.0 4009800.0 3884100.0 3883900.0 3766600.0 3200580.0 3736600.0 3303100.0 4191500.0 3069050.0 True False 3393783.580332729 3817163.1891674944 4134475.3007797254 4253024.688262886 4063009.9909775928 3180603.993025129 4114331.9937017346 3291642.3170493366 3430429.259116431 3041860.6046847673 1.1156933276646424 1.2548777492593461 1.359192888198829 1.3981655443753096 1.3356989418647764 1.0456113564594918 1.352570853301185 1.0821147793491526 1.127740453929161 1.0 21.536522611427404 -7.279733216635662 23.70553565673581 1.0786956255226645 1.2684222434239623 0.4043957818175985 0.10883204293106967 479.1750594196786 620919.356838955 0.06159373677556787 0.029701264383066465 5.251299439974522e-08 7.279733216635662 0.18972661790129774 APGTPHSHTKPYVR ddPTM_KYSE-520_SHP099_60min_R1 2 APGTPHSHTKPYVR 14 1 J3QQ67;Q07020;F8VUA6;F8VYV2;H0YHA7;Q07020-2 J3QQ67 RPL18 60S ribosomal protein L18 0 ; 182.89 2.4427e-09 1729660000.0 1674720.0 1240040.0 1013820.0 1435210.0 1139740.0 1077310.0 939220.0 1207720.0 1051940.0 779570.0 False True 1581819.9431284491 1180466.6170620122 1079172.4593693537 1571611.9268883793 1229431.0537664758 1070586.1086821468 1034165.5235038645 1203530.7012039658 860934.2132494181 772663.6162962831 2.047229751428971 1.5277885384593473 1.3966911817878813 2.0340182891253598 1.5911595005077115 1.3855785183906255 1.3384421133495004 1.5576386357792003 1.1142419483607302 1.0 19.559480939395748 -7.215206481446671 0.30064909332563866 0.9268230718104714 1.8605232742332933 0.5633888708890442 0.213674707260746 1.2918089324652648 0.39876020294959175 0.391746359831507 0.4318785255323222 6.092471672268293e-08 7.215206481446671 0.9337002024228219 APIDT(ph)SDVEEK ddPTM_KYSE-520_SHP099_60min_R1 1 APIDTSDVEEK 11 0 D6RIY6;Q06265-3;Q06265-4;Q06265;Q06265-2 D6RIY6 EXOSC9 Exosome complex component RRP45 1 APIDT(0.784)S(0.216)DVEEK 113.24 0.0013372 1258400000.0 1752000.0 1417900.0 1453600.0 1537200.0 1551700.0 1641100.0 1564400.0 1570400.0 1668700.0 1790000.0 True False 1654813.067474586 1349781.9556887103 1547301.3818422316 1683295.025823966 1673809.9620347095 1630857.2861648635 1722544.8190726829 1564952.6489341143 1365706.144503777 1774141.9925989262 0.9327399240747714 0.7608083013194596 0.8721406675998928 0.9487938580147808 0.9434475757956435 0.9192371822369381 0.9709171116283319 0.8820898527076899 0.7697840140197375 1.0 20.75869004898597 -5.005372270826088 24.78140240015558 0.9169013521341843 0.8391992103629172 0.1524306016299204 0.07021447784085186 365.69396445566525 1686919.9145915327 0.018384392808769932 0.036519762385430934 9.877060845948347e-06 5.005372270826088 -0.07770214177126711 APIDTS(ph)DVEEK ddPTM_KYSE-520_SHP099_60min_R1 4 APIDTSDVEEK 11 0 D6RIY6;Q06265-3;Q06265-4;Q06265;Q06265-2 D6RIY6 EXOSC9 Exosome complex component RRP45 1 APIDT(0.019)S(0.981)DVEEK;APIDT(0.308)S(0.692)DVEEK;APIDT(0.056)S(0.944)DVEEK;APIDT(0.029)S(0.971)DVEEK 190.34 6.8189e-08 11445900000.0 24596500.0 20940200.0 18876800.0 18988600.0 20252000.0 20838300.0 21204200.0 21205300.0 21850300.0 21260300.0 True False 23232083.113092873 19934201.360119 20093628.73194789 20793270.834869258 21845717.181882404 20708240.44012511 23347727.469049457 21131743.763654225 17882836.321238607 21071950.28226313 1.102512240295479 0.9460064727325308 0.9535723301730301 0.986774862143233 1.0367202318368498 0.9827396212848811 1.1080003111388277 1.0028375864877312 0.8486559659497255 1.0 24.328820510988407 -7.592373108865755 12.7603596737962 0.924594566475527 1.013055111830981 0.25448060592998634 0.062187898261349545 1.1811877685347878 213.33324601578346 0.041221204082487736 0.015567585365280745 2.5563887115638652e-08 7.592373108865755 0.088460545355454 APIRPDIVNFVHTNLR ddPTM_KYSE-520_SHP099_60min_R1 3 APIRPDIVNFVHTNLR 16 1 P36578;H3BTP7;H3BU31 P36578 RPL4 60S ribosomal protein L4 0 ;; 212.69 8.188499999999999e-18 3905600000.0 2484030.0 2607420.0 2186770.0 1686360.0 3211330.0 2823950.0 1895130.0 1922460.0 1686690.0 1671040.0 False True 2346235.9041089634 2482155.6293827896 2327732.6931557115 1846631.1473773795 3464043.4010317265 2806324.6805589353 2086708.235086433 1915791.4349655386 1380429.6139947737 1656235.8856494476 1.4166073350046702 1.4986727741438113 1.4054354897901242 1.1149566093680392 2.091515726139092 1.6943991522430466 1.259910048542504 1.1567141199904103 0.8334740395106679 1.0 20.659476729372468 -7.217082104266353 2.1703700303332645 0.9492839903124548 1.5298373855069853 0.4981765271043944 0.24416614226075434 0.29871388983124864 2.6763857276856617 0.17329103369167304 0.07559742418993683 6.066216356775572e-08 7.217082104266353 0.5805533951945305 APKPDGPGGGPGGSHMGGNYGDDR ddPTM_KYSE-520_SHP099_60min_R1 8 APKPDGPGGGPGGSHMGGNYGDDR 24 1 H3BPE7;P35637-2;P35637 H3BPE7 FUS RNA-binding protein FUS 0 ;;;;;;; 181.24 2.9886000000000004e-11 19523280000.0 7262630.0 6995470.0 4262840.0 12280060.0 6121580.0 6404190.0 5112560.0 6764620.0 5985970.0 5076210.0 False True 6859757.436206032 6659397.120785456 4537629.487185154 13447153.21026532 6603313.518974313 6364219.074696335 5629387.45857724 6741155.112094182 4899068.742023894 5031238.728631617 1.3634331038932297 1.3236098463959514 0.9018911111020341 2.6727320915504724 1.312462770131813 1.2649407865460718 1.1188869704277193 1.3398599183401547 0.9737301301455695 1.0 22.2624822154059 -5.9897775392160915 24.99969425234128 1.1738000292715154 1.5622307146895804 0.17491571209784018 0.43299589975802666 429.33547945444076 1049960.8194291778 0.13743584642814632 0.1556765393657545 1.0238172929198501e-06 5.9897775392160915 0.388430685418065 APLHNLT(ph)YELPTLNQEQENFLAVEAR ddPTM_KYSE-520_SHP099_60min_R1 1 APLHNLTYELPTLNQEQENFLAVEAR 26 0 Q6P0N0;G5E9K5;Q6P0N0-2 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 APLHNLT(0.548)Y(0.451)ELPTLNQEQENFLAVEAR 81.525 0.00079001 0.0 17589.0 20866.0 14910.0 12452.0 13261.0 19460.0 19452.0 15692.0 19851.0 22445.0 True False 16613.303107197782 19863.566039495476 15871.122456843485 13635.43433616968 14304.565255231217 19338.54292167952 21418.39799322543 15637.568114540341 16246.558802987054 22246.15476194577 0.7467943689583814 0.8928988516017183 0.7134321695897125 0.6129344366287709 0.6430129345184894 0.8692982283284297 0.9627910181522111 0.702933530845067 0.7303086298212034 1.0 14.441268367975171 -6.2791744747538925 24.4821632971587 0.8413574301461976 0.7248046474923912 0.26038045226855056 0.10966342243206234 1111.2977120243918 1534069.9053664352 0.04157997722761695 0.03675339927988429 5.258059850964228e-07 6.2791744747538925 -0.11655278265380642 APLKPYPVS(ph)PSDK ddPTM_KYSE-520_SHP099_60min_R1 2 APLKPYPVSPSDK 13 1 A0A0A0MSX9;P41252;J3KR24;Q5TCC6 A0A0A0MSX9 IARS Isoleucine--tRNA ligase, cytoplasmic 1 APLKPYPVS(0.903)PS(0.097)DK;APLKPYPVS(0.956)PS(0.044)DK 209.43 6.2126e-11 3558400000.0 3422900.0 2803100.0 2264500.0 2270200.0 2370900.0 2446600.0 2407800.0 2620300.0 2732600.0 2442500.0 True False 3233024.913618018 2668434.868461119 2410473.293328109 2485959.1254394837 2557476.341424305 2431329.861879811 2651203.9218634698 2611210.7908826144 2236428.7232402605 2420861.350236246 1.3354853689999697 1.102266706930867 0.9957089418164642 1.0268903360355128 1.0564323897255525 1.0043242921130298 1.0951490144632798 1.0786288073159551 0.9238152870762355 1.0 21.2070890236901 -4.293185357471764 2.7755441703635615 1.0289511059110243 1.3811140157081696 0.8037066320293189 0.046407153755793615 0.1629001547437296 1.8060555156826903 0.011810334257111664 0.12619674511540746 5.091135343362412e-05 4.293185357471764 0.35216290979714526 APLKPYPVS(ph)PSDKVLIQEK ddPTM_KYSE-520_SHP099_60min_R1 3 APLKPYPVSPSDKVLIQEK 19 2 A0A0A0MSX9;P41252;J3KR24;Q5TCC6 A0A0A0MSX9 IARS Isoleucine--tRNA ligase, cytoplasmic 1 APLKPYPVS(0.97)PS(0.03)DKVLIQEK;APLKPYPVS(0.5)PS(0.5)DKVLIQEK;APLKPYPVS(0.837)PS(0.163)DKVLIQEK 196.2 3.4336e-13 6487500000.0 10696200.0 10032000.0 9182400.0 6810500.0 7544700.0 7920700.0 6112570.0 6875320.0 10392000.0 7448200.0 True False 10102860.463653926 9550047.661660997 9774312.196359476 7457767.8723485125 8138424.966529136 7871263.973265512 6730488.228534333 6851471.119631746 8505074.761001538 7382214.742611907 1.3685405824539079 1.2936561715735306 1.3240352031403002 1.0102344800809566 1.1024367686775898 1.0662469526700022 0.9117166681272961 0.9281050956271182 1.1521034076546453 1.0 22.815622274341344 -5.259959198710893 24.512395462359574 1.0217098095720045 1.3252352303688237 0.795952043146502 0.07059763087398463 44.7239091874303 740635.5745002914 0.02037809840098765 0.033014415398401976 5.495925047907641e-06 5.259959198710893 0.3035254207968192 APLS(ph)PSLLIR ddPTM_KYSE-520_SHP099_60min_R1 3 APLSPSLLIR 10 0 O75807 O75807 PPP1R15A Protein phosphatase 1 regulatory subunit 15A 1 APLS(0.88)PS(0.12)LLIR;APLS(0.905)PS(0.095)LLIR;APLS(0.885)PS(0.115)LLIR 121.29 0.00050315 142042000.0 188744.0 215393.0 162139.0 135441.0 163648.0 262842.0 202555.0 227383.0 265023.0 302158.0 True False 178273.99406816412 205045.19696851555 172590.73937157245 148313.2719181786 176526.16657024936 261201.50558171037 223031.23614629704 226594.26144459113 216901.50388615392 299481.1151953667 0.5952762462229612 0.6846682029841987 0.5762992409687762 0.49523413795700044 0.5894400602024351 0.8721802221529573 0.7447255430473553 0.7566228718521106 0.7242577006722379 1.0 18.192105506255587 -6.248328735124712 24.228070642041608 0.7996692109291909 0.5877197118608704 0.6402386216736392 0.08607673730644562 364.2820756116154 673182.2212306404 0.028352907244807823 0.02817324339407485 5.645095128829761e-07 6.248328735124712 -0.2119494990683205 APLS(ph)PSLNSRPSPISATPPALVPETR ddPTM_KYSE-520_SHP099_60min_R1 2 APLSPSLNSRPSPISATPPALVPETR 26 1 X6RKU3;Q6P3S6 X6RKU3 FBXO42 F-box only protein 42 1 APLS(0.428)PS(0.428)LNS(0.103)RPS(0.032)PIS(0.01)ATPPALVPETR;APLS(0.574)PS(0.386)LNS(0.039)RPSPISATPPALVPETR 127.77 8.0506e-05 680460000.0 106428.0 133836.0 109269.0 87300.0 82395.0 133716.0 104133.0 130993.0 158674.0 127505.0 True False 100524.22668104187 127406.31766806837 116312.65457658142 95596.96575229801 88879.01773657912 132881.42884456826 114659.77988014292 130538.61585699591 129862.80144603112 126375.40489738902 0.7954413816728254 1.0081575427712093 0.9203741398179647 0.7564523004291723 0.7032936338264931 1.051481725834721 0.9072950545499051 1.0329432057051546 1.0275955321486305 1.0 16.947356188860013 -6.285509610375768 24.830197264148506 0.9998865566600027 0.8464522534367255 0.4771535834372347 0.08712367680872031 772.5810960248425 796970.9582471548 0.03330122293081703 0.02938357711631178 5.181916249692049e-07 6.285509610375768 -0.15343430322327722 APPPSRPPPRPS(ph)V ddPTM_KYSE-520_SHP099_60min_R1 5 APPPSRPPPRPSV 13 2 Q9H6X2 Q9H6X2 ANTXR1 Anthrax toxin receptor 1 1 APPPSRPPPRPS(1)V;APPPSRPPPRPS(1)V;APPPSRPPPRPS(1)V;APPPSRPPPRPS(1)V;APPPSRPPPRPS(1)V 75.445 0.012183 4295430000.0 1630420.0 1761890.0 1585450.0 1778750.0 1751330.0 1795550.0 1610900.0 1917790.0 2320150.0 1743840.0 True False 1539977.352438308 1677246.159749194 1687650.643809692 1947801.865199311 1889149.7072953843 1784343.3064245463 1773745.4928689504 1911137.634105551 1898869.2462218725 1728390.934286992 0.8909890244671934 0.97040902406787 0.9764287756495862 1.1269451988897592 1.0930106550661292 1.0323725211858024 1.02624091441481 1.1057322716714821 1.0986341160168185 1.0 20.72099813819627 -4.918737439794161 2.2535920483143985 1.070529660810514 0.9200576378862295 0.6412462933416705 0.04253732957360244 0.19258349375194062 1.9345712485933522 0.012186176823155608 0.03385235803466469 1.2057646858610406e-05 4.918737439794161 -0.1504720229242844 APPQTHLPSGASSGTGSASATHGGGS(ph)PPGTR ddPTM_KYSE-520_SHP099_60min_R1 3 APPQTHLPSGASSGTGSASATHGGGSPPGTR 31 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;P46379-4;F6U341;A0A0G2JJM1;X6REW1;F6S6P2;F6TC96;F6VEM6;F6X9W3;A0A1B0GX79;A0A0G2JJR8;F6XTU0;F6U1F2;F6UR09;F6WML8 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 APPQTHLPSGASSGTGSASATHGGGS(0.999)PPGTR;APPQTHLPSGASSGTGSASATHGGGS(0.997)PPGT(0.003)R;APPQTHLPSGASSGTGSAS(0.001)AT(0.042)HGGGS(0.924)PPGT(0.033)R 237.45 3.8152999999999996e-31 2834210000.0 592120.0 1351520.0 2375120.0 322873.0 360570.0 1132820.0 282459.0 268762.0 396554.0 1044630.0 True False 559273.9232380437 1286590.9505271213 2528224.0355263646 353558.75284469314 388944.8076373365 1125749.6501817568 311012.71225418727 267829.72735152254 324549.78991283703 1035375.3909098426 0.5401653623876247 1.2426323455462096 2.4418428887948282 0.34147880657468704 0.37565583560523763 1.0872864664018114 0.30038642504423724 0.25867886150564723 0.31346098503233394 1.0 19.98172250266631 -5.35805830089691 23.675231726635555 0.5021960931820676 1.3924110238475884 0.38411026864962794 0.5116375768860709 30.758570165797884 7532.010700089733 0.1458811041461387 0.21637650405138795 4.38471832147928e-06 5.35805830089691 0.8902149306655208 APPS(ph)PGSLAAPGR ddPTM_KYSE-520_SHP099_60min_R1 3 APPSPGSLAAPGR 13 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 APPS(0.995)PGS(0.005)LAAPGR;APPS(0.914)PGS(0.086)LAAPGR;APPS(0.933)PGS(0.067)LAAPGR 132.06 2.8103000000000002e-05 723650000.0 510510.0 678620.0 430920.0 340247.0 392675.0 583430.0 429290.0 527840.0 621160.0 527720.0 True False 482190.9926235455 646018.0765706135 458697.7926963779 372583.9725810096 423576.2884848744 579788.5969576299 472686.82266665326 526009.0462387821 508373.00216933375 523044.81135994673 0.9218923162048411 1.2351103816342794 0.8769760883464978 0.7123366191364555 0.8098279139478539 1.1084874266320432 0.9037214640130742 1.0056672675351241 0.9719492309799127 1.0 18.99657502771078 -8.70161723244578 17.033859663461183 0.9999999999989256 0.9497068613686581 0.01164517505109064 0.13942078403722832 0.0 0.0 0.1431085230772979 0.03470891509257894 1.987846143386428e-09 8.70161723244578 -0.05029313863026752 APQAGAHTPLTPQPGLAPQQQS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 APQAGAHTPLTPQPGLAPQQQSPK 24 0 O15063 O15063 KIAA0355 Uncharacterized protein KIAA0355 1 APQAGAHTPLTPQPGLAPQQQS(1)PK;APQAGAHTPLTPQPGLAPQQQS(1)PK 236.34 1.5946e-28 6161900000.0 1976220.0 1869310.0 1492560.0 1357230.0 1549930.0 1837750.0 1529590.0 1910810.0 2119050.0 2071950.0 True False 1866595.1371031005 1779505.5417084855 1588772.8057804378 1486220.7311339215 1671900.6731046312 1826279.9205712487 1684215.8845598225 1904181.8460964055 1734283.9369034143 2053594.1349527051 0.9089406252838216 0.8665322477410893 0.773654725020447 0.7237168756172697 0.8141339345727804 0.8893090847346564 0.8201308407995674 0.9272435159833856 0.8445115358412121 1.0 20.969719650031323 -8.250973611728204 0.5692456571541654 1.0012513251548878 0.8188445437022931 0.43819821402061543 0.05672693343201518 1.2152360760338519 0.8432483800012623 0.07194349031834997 0.02858840600558059 5.610820670396e-09 8.250973611728204 -0.1824067814525947 APQPTS(ph)PPASR ddPTM_KYSE-520_SHP099_60min_R1 1 APQPTSPPASR 11 0 E7ET89;Q86UW9 E7ET89 DTX2 Probable E3 ubiquitin-protein ligase DTX2 1 APQPT(0.254)S(0.74)PPAS(0.006)R 78.884 0.012114 394460000.0 734950.0 734580.0 751190.0 495010.0 481590.0 694520.0 578120.0 611180.0 723930.0 704690.0 True False 694180.8584134984 699289.6741729412 799612.9093464965 542055.601569817 519488.39312772814 690185.2430608871 636562.0115074784 609059.9592304837 592482.5607902074 698446.9948405233 0.9938919682401969 1.0012065043426959 1.144844083020319 0.7760869551648437 0.7437764024546245 0.9881712544535715 0.9113963066772517 0.8720203017976341 0.8482856468234774 1.0 19.413791108063947 -5.262780815256028 24.999305281322165 0.8722739535854066 1.0421034152947006 0.45453716316658666 0.08495193567347817 111.68962664557252 2081487.3121160318 0.024347808589816878 0.03842038397600603 5.460333699756157e-06 5.262780815256028 0.16982946170929403 APQT(ph)SS(ph)SPPPVRR ddPTM_KYSE-520_SHP099_60min_R1 1 APQTSSSPPPVRR 13 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 APQT(0.915)S(0.122)S(0.534)S(0.429)PPPVRR 65.219 0.05445 0.0 191570.0 178220.0 190840.0 142260.0 169760.0 175130.0 147070.0 147860.0 204740.0 151720.0 True False 180943.23021467275 169658.043686326 203141.85175479593 155780.3476279712 183119.1461977266 174036.9487088248 161937.27086488093 147347.10817078358 167564.3770753901 150375.8788363739 1.2032729691412785 1.128226448278539 1.3508938622785205 1.0359397320462413 1.2177428162995552 1.1573461784931403 1.0768832881840522 0.979858666901718 1.1143035596667685 1.0 17.198213643353863 -6.7992657203796965 2.902362546258168 1.0340393132846268 1.1848331862771335 0.4268176030326172 0.08077957951701749 0.25206648335603243 4.333379340408664 0.03529260838879619 0.023417505178075854 1.5875751034200027e-07 6.7992657203796965 0.15079387299250668 APQT(ph)SSSPPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.399)S(0.171)S(0.259)S(0.171)PPPVR 83.314 0.027000000000000003 8027200000.0 634810.0 746790.0 541970.0 342250.0 467630.0 652530.0 478200.0 575910.0 679950.0 674020.0 True False 599595.8238376387 710913.0874453572 576906.2533826608 374777.3370987855 504429.8205492628 648457.3182262862 526541.1227822531 573912.3026284045 556488.2201446302 668048.7071796252 0.8975330951077182 1.0641635554489692 0.8635691487500208 0.5610030123118183 0.7550794053308924 0.9706737117476807 0.7881777438133363 0.8590875133212266 0.8330054592785874 1.0 19.349593767322926 -4.971385301806846 11.929927470089584 0.8115005791105878 0.9767593584474371 0.20555047805562043 0.11999499516852918 1.1351751401794026 467.1196980390971 0.032011365384643664 0.06649048426294739 1.068106844819625e-05 4.971385301806846 0.1652587793368493 APQTS(ph)S(ph)SPPPVR ddPTM_KYSE-520_SHP099_60min_R1 2 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 APQT(0.455)S(0.663)S(0.641)S(0.24)PPPVR;APQT(0.117)S(0.72)S(0.703)S(0.46)PPPVR 80.37899999999999 0.006238800000000001 0.0 729600.0 715780.0 702530.0 542880.0 601210.0 644310.0 598170.0 626600.0 676570.0 594210.0 True False 689127.6335784585 681392.8543923164 747816.2078877442 594475.1519771757 648521.8065830305 640288.6222953412 658638.8611766218 624426.4708495388 553721.9429417639 588945.761688385 1.1701037317984475 1.1569704694688774 1.2697539511005405 1.0093886239590877 1.1011570992952786 1.0871775704094837 1.1183353443081772 1.0602444426451731 0.9401917442352556 1.0 19.167775251198446 -6.036528975978247 0.34571133956117767 0.9791255244920846 1.2291201031928265 0.5156246785411294 0.06304466696331226 1.8441879890469552 0.4159082525693602 0.0752024732314736 0.17453576336667595 9.193291354344642e-07 6.036528975978247 0.24999457870074193 APQTS(ph)SSPPPVR ddPTM_KYSE-520_SHP099_60min_R1 4 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.11)S(0.367)S(0.367)S(0.157)PPPVR;APQT(0.046)S(0.318)S(0.318)S(0.318)PPPVR;APQT(0.25)S(0.292)S(0.292)S(0.166)PPPVR;APQT(0.059)S(0.314)S(0.314)S(0.314)PPPVR 103.43 0.0023988000000000004 18465210000.0 6931770.0 7696670.0 6117470.0 4515730.0 5480780.0 7959250.0 6152960.0 6698030.0 7334780.0 7818850.0 True False 6547250.899959081 7326910.420262801 6511811.904498082 4944903.621496264 5912086.204627568 7909573.3684161175 6774961.243902754 6674796.097261962 6002968.846757005 7749581.0719732465 0.8448522364179847 0.945458903160707 0.840279215614426 0.6380865721090084 0.762891071106918 1.0206452832684714 0.8742358046172 0.8613105708903028 0.7746184975684746 1.0 22.885686892392034 -6.2071321053586415 24.998689507512122 0.895499393447572 0.8065849289154661 0.2040549344663194 0.09746879044499882 637.9216742220731 293647.3599210417 0.034791363592659476 0.034791341525119764 6.206802046305171e-07 6.2071321053586415 -0.08891446453210594 APQTS(ph)SSPPPVRR ddPTM_KYSE-520_SHP099_60min_R1 1 APQTSSSPPPVRR 13 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.005)S(0.332)S(0.332)S(0.332)PPPVRR 83.087 0.006247600000000001 2553900000.0 488600.0 439390.0 456600.0 369130.0 374660.0 380570.0 351370.0 300780.0 455910.0 355130.0 True False 461496.3840000479 418281.04486216424 486033.1665858303 404212.0042170189 404143.61047620326 378194.72146472597 386889.90864073683 299736.6643825795 373128.236555832 351983.82448695885 1.3111295232748588 1.1883530314833026 1.3808394953781122 1.1483823292339819 1.1481880199048093 1.0744661974622594 1.099169568955778 0.8515637467700874 1.0600721129719315 1.0 18.425149605377072 -6.119003684232212 0.8397762159294682 0.9736295891855472 1.2891476786698872 0.7005410666861438 0.07796999918537209 0.3277458350678937 0.5077718889646242 0.046157953906981915 0.05060171884460328 7.603198269234387e-07 6.119003684232212 0.31551808948434 APQTSS(ph)S(ph)PPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 APQT(0.083)S(0.323)S(0.678)S(0.915)PPPVR 110.51 0.0077063999999999995 0.0 459910.0 486960.0 478910.0 422080.0 423240.0 472450.0 426070.0 445480.0 559580.0 479580.0 True False 434397.87549214525 463565.71065813873 509781.30488309264 462194.3562970202 456546.58009381354 469501.2643035711 469141.31364248187 443934.73385581316 457974.37786386075 475331.2943075945 0.9138844437434398 0.9752476140528588 1.0724757889666843 0.9723625644515778 0.9604807963651031 0.9877348071253842 0.9869775444216661 0.9339480467038972 0.9634845913753328 1.0 18.85857386167802 APQTSS(ph)SPPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.063)S(0.2)S(0.638)S(0.1)PPPVR 91.307 0.0065611 3527200000.0 769500.0 803880.0 681770.0 664690.0 652530.0 820180.0 699860.0 742840.0 851780.0 784630.0 True False 726814.3010397808 765260.3981515202 725717.9850705684 727861.9377536646 703880.3986121728 815060.9523896775 770608.6787753818 740263.261420159 697118.223626433 777678.7886329029 0.9345944773901603 0.9840314656090682 0.9331847488682603 0.9359416103314167 0.9051042781423141 1.0480688997863623 0.9909087016891 0.9518881988815493 0.8964089464905056 1.0 19.56881486392034 APQTSS(ph)SPPPVRR ddPTM_KYSE-520_SHP099_60min_R1 1 APQTSSSPPPVRR 13 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQTS(0.234)S(0.383)S(0.383)PPPVRR 85.837 0.0034884 2883700000.0 381090.0 336710.0 316480.0 243870.0 312800.0 286790.0 255600.0 248500.0 369890.0 305360.0 True False 359950.1780159197 320533.94618798635 336880.8071859039 267047.3314778106 337415.58041145693 285000.03723065136 281438.54241560877 247638.01150033582 302727.3001680959 302654.7479664851 1.1893095364748063 1.05907456711527 1.1130861466716817 0.8823497178619596 1.1148530881426024 0.9416671608344015 0.9298996440881022 0.8182194833029957 1.0002397193571166 1.0 18.207313458275184 -3.92729719039998 0.47958582698264796 0.9279463464683727 1.4359616663708494 0.46190110245982186 0.08044798826816658 5.451275571475031 0.7649995802075433 0.05076057703712845 1.6744769308034526 0.00011822322700029294 3.92729719039998 0.5080153199024767 APQTSSS(ph)PPPVR ddPTM_KYSE-520_SHP099_60min_R1 3 APQTSSSPPPVR 12 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 APQT(0.045)S(0.111)S(0.111)S(0.734)PPPVR;APQT(0.01)S(0.131)S(0.131)S(0.729)PPPVR;APQT(0.083)S(0.083)S(0.083)S(0.751)PPPVR 106.11 0.00064097 21381930000.0 2577800.0 2413190.0 2342810.0 1467620.0 2162710.0 2625530.0 1746390.0 2119140.0 2443370.0 2190630.0 True False 2434804.2952831034 2297256.7301279637 2493831.2812285344 1607102.1635439564 2332902.9728633678 2609143.093379094 1922932.1443239208 2111789.197950995 1999715.6003452942 2171222.722484351 1.121397758999665 1.0580474800389903 1.1485838165764262 0.7401830069764017 1.0744650692463367 1.2016929752806136 0.8856448140537457 0.9726267029550284 0.9210089686502473 1.0 21.050076293500485 APRPSAPS(ph)PPPR ddPTM_KYSE-520_SHP099_60min_R1 9 APRPSAPSPPPR 12 1 Q8IV50 Q8IV50 LYSMD2 LysM and putative peptidoglycan-binding domain-containing protein 2 1 APRPS(0.023)APS(0.977)PPPR;APRPS(0.005)APS(0.995)PPPR;APRPS(0.001)APS(0.999)PPPR;APRPS(0.004)APS(0.996)PPPR;APRPS(0.02)APS(0.98)PPPR;APRPS(0.005)APS(0.995)PPPR;APRPS(0.004)APS(0.996)PPPR;APRPS(0.009)APS(0.991)PPPR;APRPS(0.028)APS(0.972)PPPR 124.12 0.00016245 27257500000.0 7327960.0 6123760.0 7683900.0 4463581.0 7464550.0 6592090.0 4836310.0 5251990.0 7991660.0 6747060.0 True False 6921463.450873901 5829565.377648849 8179216.4886746835 4887798.396215436 8051967.617520265 6550946.321098378 5325211.41263706 5233772.072513678 6540575.997354268 6687286.29753325 1.0350182634512046 0.8717385675261443 1.2230994942884028 0.7309090980624541 1.2040710176399068 0.9796120622972035 0.7963187421183655 0.7826451328163215 0.9780613101261868 1.0 22.672989452934267 -6.6052769296184835 7.494258301581069 0.8721597710638489 1.009960704981496 0.12998709793238494 0.14902022300951692 0.42815252863611714 33.289389080399495 0.05412689020270045 0.04181164730421449 2.4815502302272676e-07 6.6052769296184835 0.13780093391764714 APS(ph)DS(ph)SLGTPSDGRPELR ddPTM_KYSE-520_SHP099_60min_R1 3 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 2 APS(0.992)DS(0.419)S(0.308)LGT(0.28)PSDGRPELR;APS(0.954)DS(0.782)S(0.261)LGT(0.001)PS(0.002)DGRPELR;APS(0.97)DS(0.581)S(0.45)LGTPSDGRPELR 165.9 4.7616000000000005e-07 2653330000.0 1910570.0 1839350.0 1912630.0 1757650.0 1925660.0 1699860.0 1570570.0 1703890.0 2115400.0 1704220.0 True False 1804586.8734731288 1750984.865079361 2035921.1901161985 1924696.5275432589 2077198.486493367 1689250.5432089483 1729338.5428860812 1697979.6032809156 1731296.6848944027 1689121.936663097 1.0683579641610337 1.036624311764298 1.2053133322856562 1.1394657104184824 1.2297504646685988 1.0000761381064682 1.0238091788106387 1.0052439474176253 1.0249684450340057 1.0 20.68784204848142 -6.290577664120764 24.777910737915683 1.011959119718512 1.1344410475621636 0.5766262321166601 0.05357806738076999 516.742603764945 439413.3912131414 0.020094460827842883 0.01772412901644823 5.121796698820389e-07 6.290577664120764 0.12248192784365153 APS(ph)DSS(ph)LGTPSDGRPELR ddPTM_KYSE-520_SHP099_60min_R1 6 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 2 APS(0.794)DS(0.563)S(0.643)LGTPSDGRPELR;APS(1)DS(0.208)S(0.791)LGT(0.001)PSDGRPELR;APS(1)DS(0.235)S(0.764)LGT(0.001)PSDGRPELR;APS(0.988)DS(0.069)S(0.493)LGT(0.446)PS(0.004)DGRPELR;APS(0.994)DS(0.258)S(0.6)LGT(0.147)PSDGRPELR;APS(0.992)DS(0.022)S(0.818)LGT(0.064)PS(0.104)DGRPELR 234.3 2.2124999999999997e-21 3043760000.0 4094310.0 3703680.0 3569880.0 3504350.0 3486050.0 3521320.0 3312650.0 3587490.0 4297600.0 3768470.0 True False 3867190.462495362 3525749.6534629837 3800000.176809951 3837402.370378752 3760382.302088742 3499342.135712671 3647524.9903484606 3575045.834516458 3517264.17367977 3735084.287625297 1.0353689942975974 0.9439545086423191 1.0173800332698588 1.0273937814716645 1.0067730772628773 0.9368843823167089 0.9765576114126985 0.9571526528493448 0.9416826777732469 1.0 21.832709369224084 -6.242006309819515 23.997309985393706 0.9606588904134296 1.004518868279134 0.3709704496101659 0.028375403281273276 535.1306644684613 660816.1047095618 0.00921708368705805 0.009203081607846683 5.727877089521179e-07 6.242006309819515 0.04385997786570439 APS(ph)DSSLGTPS(ph)DGRPELR ddPTM_KYSE-520_SHP099_60min_R1 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 2 APS(0.698)DS(0.285)S(0.196)LGT(0.082)PS(0.738)DGRPELR 163.44 8.504200000000001e-08 1209700000.0 1161200.0 1050900.0 1026100.0 943200.0 1007600.0 968270.0 891080.0 992580.0 1234200.0 1036400.0 True False 1096785.9212051888 1000413.1865669398 1092244.0478180482 1032841.4444165784 1086892.3875402287 962226.6677684804 981159.0625027401 989136.9716499135 1010100.391650123 1027218.3023069989 1.067724278998875 0.9739051419938116 1.0633027520683869 1.005474145171431 1.0580928952484683 0.9367304550624188 0.9551611963096688 0.9629277140296666 0.9833356642707483 1.0 19.970311382127083 -6.261352038417264 24.999999999194635 0.9645346245538146 1.0304544270031424 0.5315515279783156 0.030868373146339324 6.038448544943497 1728554.27906007 0.009880838022034065 0.009296564377854014 5.478327125633415e-07 6.261352038417264 0.06591980244932782 APS(ph)DSSLGTPSDGRPELR ddPTM_KYSE-520_SHP099_60min_R1 4 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.571)DS(0.17)S(0.241)LGT(0.005)PS(0.013)DGRPELR;APS(0.633)DS(0.121)S(0.121)LGT(0.09)PS(0.034)DGRPELR;APS(0.954)DS(0.014)S(0.014)LGT(0.003)PS(0.016)DGRPELR;APS(0.321)DS(0.321)S(0.321)LGT(0.013)PS(0.024)DGRPELR 192.32 2.3847e-12 5257160000.0 4128540.0 4334890.0 3954660.0 3416860.0 4108940.0 4098360.0 4044010.0 3857540.0 5076090.0 3685470.0 True False 3899521.6561595476 4126635.3775974545 4209583.711279723 3741597.34708358 4432290.2013294455 4072780.6150305434 4452817.996534216 3844159.094096607 4154400.0138156563 3652819.603052274 1.067537431331438 1.1297123389693986 1.1524203680253524 1.0243038949848835 1.2133887470451183 1.1149689986407632 1.2190084593319277 1.052381314118127 1.1373132169856581 1.0 21.8005790763205 -8.847133705643147 1.084219935588881 0.9995338213169912 1.1265137097764943 0.27070597368002147 0.060437600727624836 7.868628420951327 8.887621539118276 0.06720604471416276 0.01731439024670567 1.421890964120302e-09 8.847133705643147 0.12697988845950314 APS(ph)EEDSLSSVPISPYKDEPWK ddPTM_KYSE-520_SHP099_60min_R1 1 APSEEDSLSSVPISPYKDEPWK 22 1 A0A0G2JIC6;Q9Y676 A0A0G2JIC6 MRPS18B 28S ribosomal protein S18b, mitochondrial 1 APS(1)EEDSLSSVPISPYKDEPWK 185.28 1.0447000000000001e-13 774930000.0 142820.0 134890.0 127530.0 133150.0 152440.0 165950.0 157690.0 147300.0 157120.0 163820.0 True False 134897.48989538863 128409.68192598225 135750.7878552146 145804.5359669926 164436.16073504626 164914.244493973 173630.84410609285 146789.0506800786 128590.96867287924 162368.68225003127 0.8308097844118745 0.790852522460239 0.8360650956455519 0.8979843523178223 1.0127332343673965 1.0156776676922328 1.0693616632222154 0.9040478043298915 0.7919690354748474 1.0 17.30891386607535 -5.412360942377319 2.7575453355596085 0.9681168986777318 0.8141009935803353 0.44913270139136763 0.0723478647444115 0.27069618504390774 3.9819521836472775 0.023706003929495675 0.03756360318090252 3.869359285926186e-06 5.412360942377319 -0.1540159050973965 APS(ph)EIDPR ddPTM_KYSE-520_SHP099_60min_R1 1 APSEIDPR 8 0 O95801 O95801 TTC4 Tetratricopeptide repeat protein 4 1 APS(1)EIDPR 71.45100000000001 0.026972000000000003 6747800000.0 1654700.0 1478100.0 1593300.0 1508800.0 1465700.0 1424900.0 1500900.0 1635000.0 1876400.0 1754000.0 True False 1562910.4924373294 1407089.8573266678 1696006.6673701345 1652195.8983627388 1581042.2513077736 1416006.6705601835 1652625.6193724065 1629328.5666118704 1535693.060194696 1738460.9245913518 0.8990196272629551 0.809388256832648 0.9755794009398303 0.9503785072138502 0.9094494037474087 0.8145173989993676 0.9506256919527127 0.9372247276681618 0.8833635766393088 1.0 20.729379209279085 -13.999999999991429 0.23908166645394105 1.5428905962415453 0.8943632807630351 0.23029341382198132 0.05293534078202127 272.6518407109731 2.723056688450814 71.94330487955045 0.08787731490610878 1.0000000000197352e-14 13.999999999991429 -0.6485273154785103 APS(ph)IDGKEELDLAEK ddPTM_KYSE-520_SHP099_60min_R1 3 APSIDGKEELDLAEK 15 1 Q9H0E9-2;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;H7C128;B5MCW3;Q9H0E9;H0YA84;H0YAH7 Q9H0E9-2 BRD8 Bromodomain-containing protein 8 1 APS(1)IDGKEELDLAEK;APS(1)IDGKEELDLAEK;APS(1)IDGKEELDLAEK 193.64 2.4575e-11 1678050000.0 1073130.0 980090.0 974994.0 874166.0 902649.0 967195.0 887440.0 953950.0 1274450.0 1022340.0 True False 1013601.3396683806 933005.005254917 1037843.6732855559 957246.4738124094 973682.3409297332 961158.3772422302 977151.0957797626 950640.9701036031 1043042.0062700552 1013282.8629684835 1.000314301871211 0.9207744839596055 1.024238849007196 0.9446981773757512 0.9609185909621153 0.9485588006753111 0.9643418748019972 0.9381792635065725 1.0293690383891327 1.0 19.950605535207647 -7.767783177311457 24.999954165994133 1.0146845353018161 0.9623201261371149 0.3360198886355378 0.029195103546288733 173.3975434470754 683302.1017963056 0.0238737528678917 0.006772618231501561 1.706934367884662e-08 7.767783177311457 -0.0523644091647012 APS(ph)LTDLVK ddPTM_KYSE-520_SHP099_60min_R1 8 APSLTDLVK 9 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 APS(0.997)LT(0.003)DLVK;APS(1)LTDLVK;APS(1)LTDLVK;APS(1)LTDLVK;APS(1)LTDLVK;APS(1)LTDLVK;APS(0.998)LT(0.002)DLVK;APS(1)LTDLVK 209.21 9.2004e-09 9246710000.0 16053420.0 13948400.0 11683630.0 9431570.0 10526050.0 13156200.0 10790730.0 12699150.0 15073800.0 13577290.0 True False 15162904.790900612 13278297.927024763 12436775.484268952 10327943.577095084 11354390.249968057 13074087.27575539 11881562.295776118 12655099.612653889 12336777.899575148 13457005.773571782 1.1267666110895966 0.9867200884391397 0.9241859365694514 0.7674770859783783 0.8437530934457165 0.9715450446957223 0.8829276360355229 0.9404097631812898 0.9167550424778259 1.0 23.681854105648377 -4.398819279325334 2.149617808345127 0.898006401660827 1.1524756737347037 0.5430027505402812 0.062171168273595395 0.3752330169802371 2.4420387429600745 0.017397303579158762 0.16411732077162852 3.991909810448192e-05 4.398819279325334 0.2544692720738767 APS(ph)LTNDEVEEFR ddPTM_KYSE-520_SHP099_60min_R1 8 APSLTNDEVEEFR 13 0 Q13206;E9PIF2;A0A3B3ISR7 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 APS(0.991)LT(0.009)NDEVEEFR;APS(0.929)LT(0.071)NDEVEEFR;APS(0.998)LT(0.002)NDEVEEFR;APS(0.999)LT(0.001)NDEVEEFR;APS(1)LTNDEVEEFR;APS(1)LTNDEVEEFR;APS(0.998)LT(0.002)NDEVEEFR;APS(0.999)LT(0.001)NDEVEEFR 260.5 4.6359e-22 3683360000.0 2724570.0 2700637.0 2747310.0 2290837.0 2465410.0 2806970.0 2335466.0 2786320.0 3299680.0 2815000.0 True False 2573432.6708043576 2570894.3447812214 2924405.9984514196 2508557.4597147396 2659423.7407359653 2789450.6590373483 2571557.6952316575 2776654.906251975 2700541.2901637363 2790061.290036859 0.922357039249973 0.9214472649621464 1.048151167465137 0.89910478621837 0.9531775342113836 0.9997811406503179 0.9216850197572847 0.9951949500777071 0.9679146833824787 1.0 21.411865383801942 -1.0001613294212215 0.0446281241854294 1.088345944135209 0.7448100442661314 0.12677513302759702 0.04210030772216072 1421.2190029699004 4.822059050205751 9.48761190594303 35.19859699375853 0.09996285942678253 1.0001613294212215 -0.3435358998690776 APS(ph)PAPSSVPLGSEKPSNVSQDR ddPTM_KYSE-520_SHP099_60min_R1 8 APSPAPSSVPLGSEKPSNVSQDR 23 1 O75179-6;O75179-2;O75179;H0YM23;O75179-4;O75179-7 O75179-6 ANKRD17 Ankyrin repeat domain-containing protein 17 1 APS(0.726)PAPS(0.137)S(0.137)VPLGSEKPSNVSQDR;APS(0.967)PAPS(0.016)S(0.016)VPLGSEKPSNVSQDR;APS(0.987)PAPS(0.006)S(0.007)VPLGSEKPSNVSQDR;APS(0.988)PAPS(0.01)S(0.002)VPLGSEKPSNVSQDR;APS(0.999)PAPS(0.001)SVPLGSEKPSNVSQDR;APS(1)PAPSSVPLGSEKPSNVSQDR;APS(0.999)PAPS(0.001)SVPLGSEKPSNVSQDR;APS(0.83)PAPS(0.131)S(0.038)VPLGSEKPSNVSQDR 211.78 5.7306e-21 35158700000.0 5670050.0 6369960.0 4916000.0 4296570.0 4595030.0 5567290.0 4411750.0 6048260.0 6619170.0 5299840.0 True False 5355521.023535553 6063937.560095106 5232893.2258781 4704914.720989126 4956632.718855676 5532542.47802863 4857732.744530758 6027279.997734503 5417295.583696932 5252887.540813126 1.019538488483715 1.1544007963201957 0.9961936525806661 0.8956816007259931 0.9436015297004454 1.053238325595719 0.9247737947534282 1.1474222417488695 1.031298603217071 1.0 22.324679267457018 -9.521550676045978 12.181687360352655 0.9999999997650834 1.0180517364942245 0.004572956315776366 0.0815103756430188 0.0 0.0 0.08280389909924965 0.020082895423481968 3.009188018550044e-10 9.521550676045978 0.018051736729141177 APS(ph)PARPFLK ddPTM_KYSE-520_SHP099_60min_R1 3 APSPARPFLK 10 1 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 APS(1)PARPFLK;APS(1)PARPFLK;APS(1)PARPFLK 75.819 0.025512 10069800000.0 7342100.0 6537300.0 7049700.0 5508400.0 5937900.0 6615000.0 6203200.0 6746300.0 7574400.0 6598200.0 True False 6934819.076886514 6223238.295312645 7504134.941918818 6031916.679839157 6405178.9479705505 6573713.331290332 6830279.993397895 6722898.659898251 6199079.895085636 6539745.081321919 1.0604112225555948 0.951602580517512 1.1474659713191697 0.9223473705522307 0.9794233365860542 1.005194124472134 1.0444260301377448 1.0280062259765193 0.9479084915390276 1.0 22.640802970019944 -5.28987450965494 24.999311235636945 0.9932902823106562 1.0430042927195844 0.2074061807427353 0.055552683738767435 1361.0891233912098 1196625.306211773 0.015486217201259578 0.0229740430495873 5.130095978277874e-06 5.28987450965494 0.0497140104089282 APS(ph)PARPK ddPTM_KYSE-520_SHP099_60min_R1 6 APSPARPK 8 1 O94964-2 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 APS(1)PARPK;APS(1)PARPK;APS(1)PARPK;APS(1)PARPK;APS(1)PARPK;APS(1)PARPK 104.43 0.0012864 17809900000.0 19222940.0 19318070.0 16534340.0 14657250.0 15540110.0 15317250.0 14788410.0 17411560.0 20667720.0 17571530.0 True False 18156605.198219128 18390000.92018578 17600170.012279376 16050270.633137114 16763028.245869197 15221649.3611046 16283366.803773101 17351163.36224865 16914983.0388228 17415859.914643496 1.042532799827633 1.0559341318956759 1.0105828881570704 0.9215893278770475 0.9625151056580681 0.874010783028062 0.9349734600289142 0.9962851933403273 0.971240186917239 1.0 24.053898372505902 -5.053231582944903 3.899144072332969 0.9481366430586329 1.0474906797462893 0.5640445508869341 0.035087704156635355 0.16086493814433608 4.976585850794536 0.01017116965280282 0.01980122070714377 8.846437570980354e-06 5.053231582944903 0.09935403668765641 APS(ph)PGAYK ddPTM_KYSE-520_SHP099_60min_R1 3 APSPGAYK 8 0 P54259 P54259 ATN1 Atrophin-1 1 APS(1)PGAYK;APS(1)PGAYK;APS(1)PGAYK 113.1 0.0010492000000000001 895720000.0 3652530.0 3304390.0 3007600.0 2614590.0 2758890.0 3419010.0 3119050.0 3331650.0 3514600.0 3440050.0 True False 3449916.8797619594 3145642.144409492 3201474.7083301437 2863079.847494851 2975998.9470631834 3397670.6903726393 3434354.0129945343 3320093.2837629546 2876437.235856038 3409573.8333184016 1.0118322841550826 0.9225910035061375 0.9389662359105674 0.8397178027109418 0.8728360471275564 0.9965089059431872 1.0072678231613525 0.9737560897842886 0.8436354150033223 1.0 21.701159995676083 -6.268626130900356 24.883894553058997 0.9652830365528663 0.9143947311054248 0.13139801170351806 0.06023434728707229 1147.008395824206 3971468.3592450884 0.022019158706368096 0.019827187022516086 5.387333598665289e-07 6.268626130900356 -0.050888305447441495 APS(ph)PHVVQENLHSEVVEVCTSSTLK ddPTM_KYSE-520_SHP099_60min_R1 2 APSPHVVQENLHSEVVEVCTSSTLK 25 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 APS(0.999)PHVVQENLHS(0.001)EVVEVCTSSTLK;APS(0.787)PHVVQENLHS(0.213)EVVEVCTSSTLK 118.61 0.00017009 1875490000.0 631320.0 680550.0 624190.0 626790.0 610980.0 619090.0 574390.0 748480.0 769330.0 553370.0 True False 596299.4210947818 647855.356473624 664426.2861393122 686359.9331487153 659060.6499993346 615226.0296702248 632454.946706187 745883.6975765453 629639.0652310728 548467.5723153448 1.0872099850452706 1.1812099551094983 1.21142309897092 1.251413880771949 1.201640139301442 1.1217181483912722 1.153130975522019 1.359941289560315 1.1479968862572205 1.0 19.065046799453935 -11.362929391652429 1.9007727742404568 0.04561280227005319 1.1949274118626936 0.3856492683805366 0.07199838149698376 2019683.3117434217 179898.05556665763 8293863.527679848 0.019303073245357596 4.335813650652535e-12 11.362929391652429 1.1493146095926403 APS(ph)PLGPTRDPVATFLETCR ddPTM_KYSE-520_SHP099_60min_R1 4 APSPLGPTRDPVATFLETCR 20 1 I3L2L9;E7EVV8;Q0VG06-3;Q0VG06 I3L2L9 C17orf70;FAAP100 Fanconi anemia-associated protein of 100 kDa 1 APS(0.492)PLGPT(0.492)RDPVAT(0.016)FLETCR;APS(0.992)PLGPT(0.008)RDPVATFLETCR;APS(0.98)PLGPT(0.02)RDPVATFLETCR;APS(0.888)PLGPT(0.112)RDPVATFLETCR 198.83 1.9557999999999999e-13 832366000.0 300075.0 318433.0 262163.0 208633.0 241585.0 281224.0 249158.0 268353.0 328789.0 291564.0 True False 283429.2415653179 303135.0007023224 279062.4464556313 228461.41759220138 260596.36506937895 279468.77670125425 274345.322187747 267422.14607706096 269089.2056962019 288980.9697933593 0.9807886026819993 1.0489791106974422 0.9656775899644173 0.7905759945215998 0.901776906817507 0.9670836695616778 0.9493542857992422 0.9253970815735225 0.9311658338215788 1.0 18.14061496477967 -4.999735825825771 24.992857524888734 0.9190741116303667 1.0129950149262426 0.31255410903610137 0.05394447444946245 10.626620408622001 1004897.565629015 0.014564392806148331 0.0298564290284954 1.0006084685574695e-05 4.999735825825771 0.09392090329587588 APS(ph)PLPK ddPTM_KYSE-520_SHP099_60min_R1 8 APSPLPK 7 0 Q9BSL1 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 1 APS(1)PLPK;APS(1)PLPK;APS(1)PLPK;APS(1)PLPK;APS(1)PLPK;APS(1)PLPK;APS(1)PLPK;APS(1)PLPK 103.8 0.0043403999999999995 9398500000.0 21414020.0 21233720.0 16340210.0 14061360.0 15898810.0 20492730.0 16301860.0 19927790.0 23526980.0 20922320.0 True False 20226141.622809455 20213620.21873651 17393526.08186039 15397747.42669797 17149955.895145357 20364827.270677764 17949811.09962174 19858665.147671137 19255073.498901848 20736964.522118628 0.9753665538288251 0.9747627333391102 0.8387691488456744 0.7425265838823373 0.8270234477593252 0.9820544009204466 0.8655949177361985 0.957645711670545 0.9285386720107394 1.0 24.305701392046892 -7.63787452834437 0.8780586481851947 0.9925373129160318 0.879117411506592 0.18907916214289222 0.07334872804424264 1.0286316706467427 1.6129402717875887 0.07675206309503652 0.029048096345632213 2.3021068210978222e-08 7.63787452834437 -0.1134199014094398 APS(ph)PMEIDPADKYVYPR ddPTM_KYSE-520_SHP099_60min_R1 3 APSPMEIDPADKYVYPR 17 1 E9PPH6;Q8NEV8-2;Q8NEV8;A0A087WZJ0;F5GXG5 E9PPH6 EXPH5 Exophilin-5 1 APS(1)PMEIDPADKYVYPR;APS(1)PMEIDPADKYVYPR;APS(1)PMEIDPADKYVYPR 147.35 4.7798e-06 6308100000.0 8276900.0 8015000.0 7014900.0 7366200.0 7325100.0 8304100.0 7108800.0 8237200.0 9244300.0 7953300.0 True False 7817763.857408918 7629947.369239731 7467091.678236839 8066281.433271219 7901543.69588222 8252271.031650503 7827426.8792021815 8208627.07577693 7565768.149838962 7882839.949573762 0.9917445879174088 0.9679185950809891 0.9472590749023894 1.023270989246379 1.002372716740173 1.0468652268015053 0.9929704179298253 1.0413286491020008 0.9597769583344204 1.0 22.910284052182522 -5.2698066216229735 24.993799977746633 1.0118038292290878 0.9688685364117299 0.3439078000978869 0.025521494938565495 605.4193845735869 1808448.4987975198 0.00678136532404152 0.010241826281057773 5.372709738539248e-06 5.2698066216229735 -0.04293529281735797 APS(ph)PPLSQVFQTR ddPTM_KYSE-520_SHP099_60min_R1 9 APSPPLSQVFQTR 13 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 APS(0.936)PPLS(0.064)QVFQTR;APS(0.986)PPLS(0.014)QVFQTR;APS(0.99)PPLS(0.01)QVFQTR;APS(1)PPLSQVFQTR;APS(0.991)PPLS(0.009)QVFQTR;APS(0.997)PPLS(0.003)QVFQTR;APS(1)PPLSQVFQTR;APS(0.999)PPLS(0.001)QVFQTR;APS(0.931)PPLS(0.069)QVFQTR 140.77 1.1792e-05 5331740000.0 1662239.0 1698795.0 1454382.0 1089885.0 1296562.0 1571213.0 1212762.0 1440440.0 1837279.0 1435643.0 True False 1570031.2890787032 1617182.3382567202 1548133.7908134784 1193467.3427141255 1398594.0529713528 1561406.476855129 1335359.8183765176 1435443.449841225 1503675.4476345403 1422924.3199333528 1.103383551102873 1.136520274200153 1.0879944696468398 0.8387426695820516 0.9829012220670039 1.0973222222586387 0.9384615890457643 1.0087981698903414 1.05675012126082 1.0 20.44042750163107 -5.020872299853314 24.74316550535397 0.9893518530025277 1.1180283174637122 0.4219234767054131 0.06524005430561128 613.6648158943211 727473.5166257002 0.01803833821891505 0.03169937918442772 9.53076365833731e-06 5.020872299853314 0.12867646446118453 APS(ph)PPSRR ddPTM_KYSE-520_SHP099_60min_R1 2 APSPPSRR 8 1 Q7Z2K8 Q7Z2K8 GPRIN1 G protein-regulated inducer of neurite outgrowth 1 1 APS(0.999)PPS(0.001)RR;APS(1)PPSRR 70.942 0.015847999999999998 0.0 220530.0 226110.0 236470.0 210680.0 209038.0 222920.0 219940.0 233390.0 336890.0 190587.0 True False 208296.7612843443 215247.3362019707 251713.23456537767 230702.9638567483 225488.10133647727 221528.6735920245 242173.6816075464 232580.42456363552 275719.2683057934 188898.5474544425 1.1026911751906412 1.1394864550447792 1.3325313400098244 1.2213061824225406 1.193699498355641 1.1727388938522756 1.2820304066443522 1.2312451720663864 1.4596156085969365 1.0 17.527252082524505 -6.765036106358618 24.9711430874636 1.262493231641159 1.1988356406818435 0.029164895552839742 0.11873122859848069 295.5549219817885 2051925.8106035872 0.04676049610322858 0.03292330144583337 1.7177655696903179e-07 6.765036106358618 -0.06365759095931556 APS(ph)PPVEHPR ddPTM_KYSE-520_SHP099_60min_R1 11 APSPPVEHPR 10 0 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR;APS(1)PPVEHPR 138.24 0.00017289 29282750000.0 5835408.0 5477823.0 4877043.0 4477614.0 5000205.0 5190883.0 4599990.0 4971941.0 5716495.0 4820766.0 True False 5511706.285642551 5214660.160700054 5191424.995324698 4903165.0883162655 5393692.686225285 5158484.773736713 5065001.8807761185 4954694.497130759 4678523.609111951 4778057.763739199 1.1535453437735788 1.0913765422164297 1.0865136530417345 1.0261837195704306 1.1288462703733209 1.0796195920619847 1.0600545517081323 1.0369683126755103 0.9791684907238636 1.0 22.187992864507358 -7.31388745184761 1.4206589274163344 0.9891668510213906 1.0928363246984756 0.6219863916307706 0.03206075710358216 0.30420661558870177 1.0849914108571683 0.027372199513689372 0.010146520516367951 4.854142797982264e-08 7.31388745184761 0.10366947367708501 APS(ph)PRPGPGPLR ddPTM_KYSE-520_SHP099_60min_R1 6 APSPRPGPGPLR 12 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 APS(1)PRPGPGPLR;APS(1)PRPGPGPLR;APS(1)PRPGPGPLR;APS(1)PRPGPGPLR;APS(1)PRPGPGPLR;APS(1)PRPGPGPLR 98.943 0.0010438 20594800000.0 3577890.0 4186160.0 3938150.0 3157380.0 3427340.0 3482330.0 3031130.0 3518500.0 4285410.0 3330870.0 True False 3379417.309353114 3985050.590045735 4192009.4502627924 3457456.445899088 3697052.159102947 3460595.4867652757 3337546.2013780256 3506295.1447240706 3507287.570394877 3301361.0831776448 1.0236436500609434 1.207093222959429 1.2697821730629586 1.0472821235813434 1.1198569517104864 1.0482329559159775 1.0109606666125572 1.0620756277132737 1.0623762387781657 1.0 21.654629509890206 -5.299270075306116 24.54647306710069 1.0538949678170435 1.1708650648085492 0.40346845352643557 0.06487285496107609 431.22434238029473 279799.26906241017 0.01846045798842491 0.027382061282060256 5.020302941599357e-06 5.299270075306116 0.11697009699150573 APS(ph)PSGLMSPSR ddPTM_KYSE-520_SHP099_60min_R1 8 APSPSGLMSPSR 12 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 APS(0.99)PS(0.01)GLMSPSR;APS(0.95)PS(0.05)GLMSPSR;APS(0.986)PS(0.014)GLMSPSR;APS(0.998)PS(0.002)GLMSPSR;APS(0.974)PS(0.026)GLMSPSR;APS(0.858)PS(0.142)GLMSPSR;APS(0.633)PS(0.367)GLMSPSR;APS(0.996)PS(0.004)GLMSPSR 176.97 1.1143e-06 4276740000.0 1378060.0 1623230.0 1182790.0 1041763.0 1154003.0 1402130.0 1077637.0 1333333.0 1529310.0 1389080.0 True False 1301616.2647054975 1545247.5942820983 1259034.5359309125 1140771.8423025336 1244816.4707211056 1393378.786576285 1186575.0646836034 1328707.979025263 1251625.8547678275 1376773.8318878878 0.945410375007396 1.122368509984819 0.9144817447644785 0.8285833271091891 0.904154656261997 1.0120607715688696 0.8618518432010898 0.9650880545886649 0.9091005550646962 1.0 20.39286015100991 -4.793621586459109 24.986774204769333 0.9199178600926446 1.0338894874138693 0.2983777814236038 0.06686525097111011 186.64193029792222 144911.33687913587 0.016903423364612393 0.03519147072174056 1.6083420383198092e-05 4.793621586459109 0.11397162732122468 APS(ph)PSINR ddPTM_KYSE-520_SHP099_60min_R1 2 APSPSINR 8 0 E9PFK9;Q9UJ41;Q9UJ41-4;Q9UJ41-3 E9PFK9 RABGEF1 Rab5 GDP/GTP exchange factor 1 APS(0.974)PS(0.026)INR;APS(0.769)PS(0.231)INR 103.26 0.0024573 505880000.0 961510.0 862620.0 899250.0 707900.0 719000.0 711830.0 650870.0 722990.0 905350.0 763870.0 True False 908173.1235773349 821178.4403809824 957217.093850873 775178.603162104 775581.2094496073 707387.2049300692 716666.2914790575 720482.116437135 740961.2620162378 757102.7060818663 1.1995375479203918 1.0846328163727201 1.2643160381827616 1.0238750924214544 1.0244068647744906 0.9343345351265706 0.9465905823899718 0.9516306184741448 0.9786799810171554 1.0 19.53012949922398 -5.459303157764344 3.902280151594741 0.9696281081710799 1.1727852906093115 0.7865689729256544 0.04874303414679552 0.10131917857616526 3.033954827488289 0.014031864295056016 0.02081406477306484 3.4729364967715433e-06 5.459303157764344 0.20315718243823155 APS(ph)PSSR ddPTM_KYSE-520_SHP099_60min_R1 7 APSPSSR 7 0 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 APS(0.99)PS(0.009)SR;APS(0.997)PS(0.003)SR;APS(0.996)PS(0.004)SR;APS(0.992)PS(0.008)SR;APS(0.998)PS(0.002)SR;APS(0.99)PS(0.01)SR;APS(0.99)PS(0.01)SR 111.74 0.0056806999999999995 18840410000.0 4231475.0 3189946.0 3265531.0 2951610.0 3237907.0 4029770.0 4481382.0 2821642.0 3926038.0 4127010.0 True False 3996746.6465137163 3036696.2059534397 3476032.353294336 3232130.126966095 3492711.8597292746 4004618.710662714 4934403.826633587 2811854.382478197 3213168.466563981 4090447.9021651936 0.9770926661596452 0.7423872100524804 0.8497925988629192 0.7901653325679161 0.8538702712435184 0.9790171654656579 1.2063235969884039 0.6874196786591025 0.7855297374312376 1.0 21.963827395584765 -6.094357525708374 6.2830591906093725 0.928824243766739 0.8322365040544067 0.09177244140468888 0.13948509520333527 0.6461912663501445 35.795022969206315 0.04857738068512579 0.04880091681461211 8.047156996265573e-07 6.094357525708374 -0.09658773971233225 APS(ph)PTAEQPPGGGDSAR ddPTM_KYSE-520_SHP099_60min_R1 1 APSPTAEQPPGGGDSAR 17 0 Q15742;Q15742-2;Q15742-3 Q15742 NAB2 NGFI-A-binding protein 2 1 APS(0.651)PT(0.349)AEQPPGGGDSAR 169.06 7.499e-06 0.0 220940.0 229700.0 178120.0 151570.0 209660.0 232840.0 169530.0 195440.0 237560.0 187180.0 True False 208684.0177670293 218664.86721327103 189601.90020207656 165975.16722881762 226159.0491977815 231386.7591923873 186667.74685335744 194762.0642560391 194425.09240026225 185521.73082383635 1.1248494547799734 1.1786482707026167 1.021992945840477 0.8946400321503074 1.2190434413989628 1.2472218654110254 1.0061772603372772 1.0498072834442074 1.0479909363549447 1.0 17.501228659210582 APS(ph)PTGPALIS(ph)GASPVHCAADGTVELK ddPTM_KYSE-520_SHP099_60min_R1 1 APSPTGPALISGASPVHCAADGTVELK 27 0 E7EWD6;Q76L83 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 2 APS(0.999)PT(0.051)GPALIS(0.582)GAS(0.368)PVHCAADGTVELK 105.98 0.00097884 938060000.0 284200.0 318480.0 257230.0 299420.0 263300.0 308390.0 281390.0 266720.0 358820.0 340400.0 True False 268434.85946134554 303179.74275177415 273811.4573825519 327876.78677609476 284020.2120279304 306465.22361853824 309835.64730175276 265794.810572916 293667.3331161055 337384.32082719286 0.7956352530052426 0.898618353124542 0.8115713756680389 0.9718198699104105 0.8418299087864389 0.9083564490108854 0.9183463136108496 0.787810203868529 0.8704237719052776 1.0 18.364033403632952 -11.58169112654348 2.129460626965779 3.267167534011312 0.8691643205833212 0.33503388535191303 0.056081471068745205 1883374.2423768009 161890.0877477371 20651839.852426447 0.013939544772787386 2.6200457417088738e-12 11.58169112654348 -2.398003213427991 APS(ph)PTGPALISGAS(ph)PVHCAADGTVELK ddPTM_KYSE-520_SHP099_60min_R1 2 APSPTGPALISGASPVHCAADGTVELK 27 0 E7EWD6;Q76L83 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 2 APS(0.985)PT(0.015)GPALIS(0.125)GAS(0.875)PVHCAADGTVELK;APS(0.95)PT(0.05)GPALIS(0.166)GAS(0.834)PVHCAADGTVELK 230.72 1.6570999999999996e-23 1933160000.0 874560.0 925410.0 843890.0 925330.0 931710.0 785200.0 760520.0 812150.0 1029610.0 869790.0 True False 826046.4134078636 880951.914531272 898288.4996717395 1013273.0849893898 1005030.276295262 780299.2755448482 837400.7835599317 809332.841207234 842658.7783559262 862084.3372863798 0.9581967537051487 1.021885999349301 1.041996079524332 1.1753758201650124 1.165814332573121 0.9051310200125315 0.9713675882290757 0.9388093556540025 0.9774667534366762 1.0 19.717469488801097 -6.274199018536395 24.988404221082664 0.9555313183992671 1.0738369395263632 0.4398269100159866 0.06433087679893558 807.4841550695567 1581368.5415183369 0.024883745053227657 0.022075986425087003 5.318644727336874e-07 6.274199018536395 0.11830562112709608 APS(ph)PTKPLR ddPTM_KYSE-520_SHP099_60min_R1 5 APSPTKPLR 9 1 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 APS(0.849)PT(0.151)KPLR;APS(0.988)PT(0.012)KPLR;APS(0.969)PT(0.031)KPLR;APS(0.964)PT(0.036)KPLR;APS(0.999)PT(0.001)KPLR 137.78 0.00029669 16755590000.0 7317110.0 6787610.0 6150350.0 5828510.0 5967410.0 6665000.0 6709760.0 7415080.0 7249200.0 7221430.0 True False 6911215.322002846 6461523.027189675 6546811.401907932 6382449.837994569 6437011.217081611 6623401.262743785 7388048.0217470825 7389358.818172682 5932928.01746077 7157453.748387533 0.965596923844578 0.9027683942275364 0.9146844160023849 0.8917207239281761 0.8993437391798407 0.9253851293465833 1.0322173612943708 1.032400498548439 0.8289160120381315 1.0 22.77101501185407 -6.54833298306089 23.919077324894783 0.9764718233747286 0.9128122406469681 0.19514183511911565 0.0566380910172413 214.8162140051977 201857.66847151247 0.021314877968104818 0.0165112602000682 2.8292219377623593e-07 6.54833298306089 -0.06365958272776051 APS(ph)PTKR ddPTM_KYSE-520_SHP099_60min_R1 6 APSPTKR 7 1 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BNI3;H3BP82;H3BTR6;H3BUG0;H3BTY0;H3BNU7;H3BTV0;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 APS(1)PTKR;APS(0.9)PT(0.1)KR;APS(0.809)PT(0.191)KR;APS(1)PTKR;APS(0.901)PT(0.099)KR;APS(0.5)PT(0.5)KR 113.66 0.0018489000000000001 38527600000.0 26449150.0 18115510.0 15664800.0 18941080.0 19070460.0 23806570.0 24029500.0 16733300.0 21635000.0 27412110.0 True False 24981962.92442666 17245213.707665116 16674578.072566168 20741234.548356626 20571196.705925386 23657984.366031256 26458636.36532031 16675256.087881597 17706629.373967286 27169260.031698838 0.9194936812883302 0.6347325502256901 0.613729562494954 0.7634081503934033 0.7571496861498849 0.8707629261315576 0.9738445704612702 0.6137545177316678 0.6517155547596313 1.0 24.695471937789975 -5.775859068424003 2.7227115691872426 0.8063254523136063 0.7134165730365829 0.0752906594335988 0.1384570734000528 0.7792048964245424 11.839249736104907 0.046858893119070676 0.058371385009264344 1.6754864948231668e-06 5.775859068424003 -0.0929088792770234 APS(ph)RKDS(ph)LESDSSTAIIPHELIR ddPTM_KYSE-520_SHP099_60min_R1 1 APSRKDSLESDSSTAIIPHELIR 23 2 Q9UMX1;Q9UMX1-2;Q9UMX1-3 Q9UMX1 SUFU Suppressor of fused homolog 2 APS(0.999)RKDS(0.965)LES(0.032)DS(0.001)S(0.001)T(0.001)AIIPHELIR 104.29 0.00064043 699000000.0 244790.0 287620.0 255420.0 243090.0 191260.0 162640.0 173300.0 233840.0 325240.0 192860.0 True False 231211.01072323284 273802.3034735782 271884.7818864499 266193.2005123266 206311.0738794605 161624.90343175508 190818.85524501145 233028.86361866628 266184.6146331924 191151.41044280963 1.2095699957830477 1.4323844267709276 1.4223529988955785 1.392577747115126 1.0793070969318663 0.8455334075607642 0.9982602524510397 1.2190800113838862 1.3925328304748863 1.0 17.544356319816487 -5.763275183955449 24.980649884170596 1.0833506878048127 1.3732423847576671 0.4539560031531833 0.1475971984904911 46.96293877363272 639049.6961742042 0.04906673556698429 0.05853239446198811 1.724744687988357e-06 5.763275183955449 0.28989169695285444 APS(ph)RQDVYGPQPQVR ddPTM_KYSE-520_SHP099_60min_R1 12 APSRQDVYGPQPQVR 15 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12 O60716-5 CTNND1 Catenin delta-1 1 APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR;APS(1)RQDVYGPQPQVR 256.67 6.0096000000000004e-21 59919850000.0 13259160.0 12529370.0 12451480.0 9264950.0 11096070.0 10018950.0 9531370.0 10013300.0 14888620.0 10185570.0 True False 12523647.96331985 11927440.258232225 13254122.323872391 10145488.062391201 11969267.580997923 9956418.01670921 10494893.896806959 9978566.199421788 12185221.919567222 10095333.774053538 1.2405382767539026 1.1814805260711105 1.3128959002759666 1.004968066381972 1.185623759341238 0.9862396072825882 1.039578693651551 0.9884335102488776 1.2070152599496013 1.0 23.267185274357043 -5.265236406918485 24.956535403587388 1.0598105090418795 1.2386224653348967 0.5324154721238381 0.07986570691484315 244.3366212975527 1605941.2026860095 0.021423935895133223 0.033196535815434476 5.429546952506952e-06 5.265236406918485 0.17881195629301727 APS(ph)SDEECFFDLLTK ddPTM_KYSE-520_SHP099_60min_R1 11 APSSDEECFFDLLTK 15 0 A0A0A0MSK4;A0A0A0MRC4;Q86YR5-4;Q86YR5 A0A0A0MSK4 GPSM1 G-protein-signaling modulator 1 1 APS(0.984)S(0.016)DEECFFDLLTK;APS(0.982)S(0.018)DEECFFDLLTK;APS(0.961)S(0.039)DEECFFDLLTK;APS(0.5)S(0.5)DEECFFDLLTK;APS(0.843)S(0.157)DEECFFDLLTK;APS(0.994)S(0.006)DEECFFDLLTK;APS(0.991)S(0.009)DEECFFDLLTK;APS(0.987)S(0.013)DEECFFDLLTK;APS(0.971)S(0.029)DEECFFDLLTK;APS(0.978)S(0.022)DEECFFDLLTK;APS(0.5)S(0.5)DEECFFDLLTK 245.96 6.23e-19 1374449000.0 808967.0 792936.0 683264.0 642575.0 699300.0 761773.0 716431.0 791278.0 963393.0 829150.0 True False 764091.9878742656 754842.1643387986 727308.2907010537 703645.1348027814 754330.9315272755 757018.4921416534 788854.8371727576 788533.2413036728 788465.1163611952 821804.3760689396 0.9297735691421621 0.9185180638116685 0.8850138936715046 0.8562197468071817 0.9178959780374741 0.9211662947851578 0.9599058609862916 0.9595145320052716 0.9594316352180783 1.0 19.648435487244825 -6.680995850484 1.5207253667205274 0.9716896204802662 0.8982710734725463 0.6938454714736508 0.021678165137394186 0.25155913279577624 1.1877694124154627 0.012889014288650549 0.00828058025667855 2.0845107996975544e-07 6.680995850484 -0.07341854700771988 APS(ph)VANVGSHCDLSLK ddPTM_KYSE-520_SHP099_60min_R1 11 APSVANVGSHCDLSLK 16 0 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK;APS(0.847)VANVGS(0.153)HCDLSLK;APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK;APS(1)VANVGSHCDLSLK 233.54 4.0462e-23 56388200000.0 23111298.0 18484259.0 16978082.0 23087900.0 20338070.0 23148781.0 24241736.0 30920567.0 24032898.0 27959669.0 True False 21829268.22870966 17596247.4522016 18072516.331611674 25282167.07436976 21938560.40121112 23004300.871174663 26692327.251424022 30813310.76999163 19669129.54325678 27711968.084953308 0.7877198819582302 0.6349692449940352 0.6521556417865702 0.9123194353019318 0.7916637437643067 0.8301215128659608 0.9632057589557157 1.1119134763554468 0.7097702149107364 1.0 24.72400583788094 -5.805889563603641 0.8550923946159424 0.948103444335458 0.6849749282146795 0.3929817450815595 0.11540171446572159 0.6242311599191511 0.9942256335474206 0.06096621909768036 0.09562847555343212 1.563545184747643e-06 5.805889563603641 -0.2631285161207785 APS(ph)VATVGSICDLNLK ddPTM_KYSE-520_SHP099_60min_R1 8 APSVATVGSICDLNLK 16 0 O75369-2;O75369-9;O75369;O75369-8;E7EN95;O75369-7;O75369-5;O75369-4;A0A0C4DGA1 O75369-2 FLNB Filamin-B 1 APS(1)VATVGSICDLNLK;APS(1)VATVGSICDLNLK;APS(1)VATVGSICDLNLK;APS(1)VATVGSICDLNLK;APS(1)VATVGSICDLNLK;APS(1)VATVGSICDLNLK;APS(1)VATVGSICDLNLK;APS(0.922)VAT(0.078)VGSICDLNLK 330.82 1.9658999999999996e-58 7115430000.0 3968640.0 4335630.0 3472950.0 3211770.0 3105030.0 4756090.0 3408480.0 5114430.0 5057940.0 5537690.0 True False 3748491.627912297 4127339.8268866944 3696821.913916471 3517015.655146136 3349378.1957959854 4726405.478127994 3753042.4219591254 5096689.236046938 4139545.5962913884 5488630.374857625 0.6829557415787054 0.7519799193972426 0.6735417875561289 0.6407820193644151 0.6102393433412554 0.8611265753618172 0.6837848726616937 0.9285903564200471 0.7542037473053135 1.0 22.38801475536369 -7.774169096350457 0.51519047655701 0.9959660869031634 0.6747348149296263 0.5707682826466128 0.08082416960723081 0.6333256788571215 0.42607897844877823 0.0859578812019858 0.04538958153898116 1.682019024755546e-08 7.774169096350457 -0.32123127197353707 APS(ph)WSFPSNLGTK ddPTM_KYSE-520_SHP099_60min_R1 1 APSWSFPSNLGTK 13 0 Q9BTV6 Q9BTV6 DPH7 Diphthine methyltransferase 1 APS(0.998)WS(0.002)FPSNLGTK 77.192 0.013793999999999999 419750000.0 696250.0 548010.0 470010.0 552320.0 623640.0 625890.0 683580.0 707120.0 885500.0 638400.0 True False 657627.6245600348 521682.7770202199 500307.5966425895 604812.3267389375 672716.9199737884 621983.588347893 752682.9374978935 704667.1657630486 724715.5216384588 632744.272667685 1.0393260800092907 0.8244764900372409 0.7906947850089023 0.9558558692108189 1.0631734636452361 0.9829936282561288 1.1895531417843426 1.1136681850823122 1.1453529537027936 1.0 19.271263018169336 -5.809786773032822 1.6842245685827593 1.1025434837323917 0.8779822271511283 0.526254818950337 0.08465324120306117 0.27002120575113986 1.5849971703039016 0.031146501849630952 0.04004093000542186 1.5495772331252472e-06 5.809786773032822 -0.22456125658126347 APS(ph)YSGLSMVSGVK ddPTM_KYSE-520_SHP099_60min_R1 2 APSYSGLSMVSGVK 14 0 A0A2R8Y7K2;A0A2R8Y5N9;A0A2R8Y481;A0A2R8YFW8;A0A2R8YGN6;A0A2R8YCL5;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0 A0A2R8Y7K2 SPAST Spastin 1 APS(1)YSGLSMVSGVK;APS(0.998)YS(0.002)GLSMVSGVK 278.53 1.6677e-25 3123300000.0 971270.0 986390.0 713790.0 654710.0 617520.0 851100.0 607630.0 709640.0 838160.0 904590.0 True False 917391.7169212563 939002.3437984245 759802.0455043812 716933.4415542609 666115.3107918251 845787.9692004853 669055.1702973252 707178.4244712213 685971.2722941732 896576.0363603713 1.0232168602736538 1.0473203673949192 0.8474485316256937 0.7996348468832993 0.7429546226730575 0.9433533073602336 0.7462336078190741 0.7887545459523935 0.7651010561010051 1.0 19.77406641405955 -4.806395302583073 4.800006883828342 0.8166789042122511 1.037205334323065 0.5110135742684829 0.08025542900160776 0.12911288795839895 6.493425634155809 0.020050871368066443 0.04630415019735859 1.5617254851126374e-05 4.806395302583073 0.22052643011081385 APSDS(ph)SLGTPSDGRPELR ddPTM_KYSE-520_SHP099_60min_R1 2 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.012)DS(0.908)S(0.08)LGTPSDGRPELR;APS(0.002)DS(0.687)S(0.288)LGT(0.021)PS(0.001)DGRPELR 222.42 2.8457e-18 3519800000.0 2397200.0 2138300.0 2126820.0 1595790.0 1956680.0 2063300.0 1977830.0 1930740.0 2534200.0 1952060.0 True False 2264222.5373002747 2035572.8583462671 2263918.220232316 1747453.4018082425 2110659.58401371 2050422.179357727 2177768.358160653 1924042.7135781026 2074053.1619832623 1934766.2670797007 1.170282207120475 1.052102723198044 1.1701249183186508 0.9031857912458932 1.0909119204354845 1.0597777179837826 1.1255976472278149 0.9944574423877133 1.071991587445753 1.0 20.883727858850172 -2.1555505740292724 0.8685347346979145 1.0475822646415869 5.907079983342848 0.21381448112520085 0.0698690567158663 129.23031346256153 3.0843575273480788 0.022824751224712503 1167.0365069376778 0.006989553379704009 2.1555505740292724 4.8594977187012605 APSDSSLGT(ph)PSDGRPELR ddPTM_KYSE-520_SHP099_60min_R1 2 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 1 APSDS(0.001)S(0.002)LGT(0.946)PS(0.05)DGRPELR;APSDSS(0.002)LGT(0.991)PS(0.006)DGRPELR 349.53 4.4474e-59 5170600000.0 4170220.0 4049150.0 3328030.0 3409860.0 3937020.0 3833870.0 3617060.0 3672090.0 4686750.0 3652410.0 True False 3938889.583472528 3854622.756101937 3542560.1388362716 3733932.0691882046 4246841.0754204355 3809941.3952281326 3982707.723903763 3659352.3768622493 3835754.3433529553 3620052.48893198 1.0880752683877837 1.0647974768009958 0.9785935838409429 1.0314579914529975 1.1731435078371961 1.052454738398607 1.1001795515619104 1.0108561652214783 1.0595852836610702 1.0 21.78757918513345 -8.015573749275456 1.1527356159202096 1.0029791380239528 1.0660674263440844 0.1316537034608679 0.04981180040024481 1.183801042065436 3.5324404171606743 0.0496600842556636 0.01578986584516006 9.647754655304704e-09 8.015573749275456 0.06308828832013158 APSDSSLGTPS(ph)DGRPELR ddPTM_KYSE-520_SHP099_60min_R1 1 APSDSSLGTPSDGRPELR 18 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3;M0R2H7;Q15642-5 Q15642 TRIP10 Cdc42-interacting protein 4 1 APS(0.002)DS(0.242)S(0.242)LGT(0.085)PS(0.429)DGRPELR 270.61 7.2388e-30 1598600000.0 588920.0 551300.0 488780.0 450810.0 503930.0 606320.0 515610.0 548760.0 642800.0 426010.0 True False 556251.433617085 524814.7204818289 520287.540875651 493654.8468590313 543586.4240305157 602535.7319770152 567732.8906686697 546856.4796415468 526083.72366934 422235.8828307644 1.317394982841937 1.2429420184834905 1.2322200978929745 1.1691447054415605 1.2873998779691342 1.4270121429222926 1.344587027664396 1.2951444959516418 1.2459474551105327 1.0 18.687689662743477 -8.244856981442958 3.0702128910250237 1.000020328806491 1.2880258377425546 0.6355899070268608 0.06537904877070566 1.2494364785502494 14.706616497020885 0.07171271994789558 0.01908968161005801 5.69040292014789e-09 8.244856981442958 0.2880055089360636 APSLPAPPYAGAPGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 APSLPAPPYAGAPGSPR 17 0 Q69YU3 Q69YU3 ANKRD34A Ankyrin repeat domain-containing protein 34A 1 APSLPAPPYAGAPGS(1)PR;APSLPAPPYAGAPGS(1)PR;APSLPAPPYAGAPGS(1)PR;APSLPAPPYAGAPGS(1)PR 157.73 6.2332e-07 2350980000.0 666930.0 871550.0 551930.0 720710.0 586219.0 739370.0 642560.0 688930.0 795650.0 692860.0 True False 629934.0634080063 829679.4297767797 587508.290919223 789206.061710638 632351.1001701532 734755.3175746236 707516.2355812737 686540.2626274704 651180.0167042797 686721.7994369236 0.9173060530836792 1.208174009412653 0.8555259078726632 1.14923694334117 0.9208257269372379 1.0699461094392009 1.0302807281804662 0.9997356472306514 0.9482442777238377 1.0 19.389366235984234 -7.510117134349275 4.807596583329362 0.9733901880963365 1.0248812417093727 0.03295103269598887 0.10176517663155307 0.6563472212671365 42.025859626411076 0.05997451776356212 0.024255221440112322 3.089462055740642e-08 7.510117134349275 0.051491053613036186 APSPS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 APSPSSR 7 0 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 APS(0.47)PS(0.526)S(0.004)R 68.95 0.029715 6291200000.0 231760.0 149500.0 169540.0 177420.0 167010.0 203160.0 247030.0 174830.0 203610.0 219630.0 True False 218903.81079789402 142317.79559592504 180468.8196735911 194281.94345673188 180152.73684308637 201892.00308162434 272002.20318046893 174223.5555356289 166639.55659040838 217684.24906955415 1.0056024344138477 0.653780860141387 0.8290394020006838 0.8924942630766786 0.8275873776495618 0.9274534282777441 1.2495263407577053 0.8003498474524964 0.765510400052711 1.0 17.731877496977475 -6.319789809966882 5.34976603937479 0.9563841324042728 0.8333132545793678 0.11654384371062276 0.14646357240349694 0.4710425355405026 28.790729266548343 0.05386354872357366 0.04774710196825688 4.788617959893578e-07 6.319789809966882 -0.123070877824905 APSPT(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 1 APSPTKR 7 1 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BNI3;H3BP82;H3BTR6;H3BUG0;H3BTY0;H3BNU7;H3BTV0;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 APS(0.021)PT(0.979)KR 88.13600000000001 0.014115 3035600000.0 2765600.0 2025000.0 1824600.0 2121200.0 2066600.0 2534800.0 2675500.0 1655900.0 2542400.0 2778800.0 True False 2612186.6549130846 1927715.960413032 1942216.635463222 2322798.210237962 2229229.6626544613 2518979.3729636823 2945965.650363693 1650156.0693899638 2080764.2486884415 2754181.993873684 0.9484437341916948 0.6999232311811575 0.7051881973607509 0.8433713586846191 0.8093980962816145 0.9146016416369074 1.0696336178642538 0.5991456167604461 0.7554926483859193 1.0 21.39319246394009 -4.204645469940436 21.395176681955167 0.816612577547804 0.9484492049053351 0.07112959512641737 0.13604405792092863 30833.691684732137 11613200.251529595 0.03467928565338784 38.56101592357491 6.242442203386177e-05 4.204645469940436 0.1318366273575311 APSPTGPALISGAS(ph)PVHCAADGTVELK ddPTM_KYSE-520_SHP099_60min_R1 2 APSPTGPALISGASPVHCAADGTVELK 27 0 E7EWD6;Q76L83 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 APS(0.001)PT(0.008)GPALIS(0.041)GAS(0.95)PVHCAADGTVELK;APS(0.004)PT(0.138)GPALIS(0.108)GAS(0.749)PVHCAADGTVELK 122.63 9.7316e-05 380590000.0 191005.0 183720.0 165764.0 161541.0 193718.0 185538.0 154709.0 238130.0 252470.0 248795.0 True False 180409.5718909722 174893.81543065785 176449.4126717774 176893.8080709272 208962.50449535355 184379.98852017347 170348.49553433634 237303.9826099601 206627.8122507755 246590.8698595813 0.7316149701475348 0.7092469219572054 0.7155553357358881 0.7173574924799836 0.8474056830017477 0.7477162014358716 0.6908142853437339 0.9623388844245957 0.8379378051119153 1.0 17.911759858718717 -7.654648226151369 0.6914644618553151 0.9987000375206587 0.7268581671709976 0.6419943372130599 0.06315456438161432 0.4136480482700259 0.436146228484431 0.06076062259217035 0.026559082038853495 2.2148880186456258e-08 7.654648226151369 -0.2718418703496611 APSQAAES(ph)SPAKK ddPTM_KYSE-520_SHP099_60min_R1 1 APSQAAESSPAKK 13 1 Q8NFH8-3;Q8NFH8-2;Q8NFH8-4;Q8NFH8 Q8NFH8-3 REPS2 RalBP1-associated Eps domain-containing protein 2 1 APSQAAES(0.593)S(0.407)PAKK 63.681999999999995 0.020744 290630000.0 130990.0 149920.0 157050.0 135560.0 157890.0 165800.0 105940.0 133870.0 159720.0 148740.0 True False 123723.72357790866 142717.61816549228 167173.6942888845 148443.58164239975 170315.04472878814 164765.1806996128 116649.44907476367 133405.63621549282 130718.87421354535 147422.2793179688 0.8392471216040167 0.9680871766856268 1.133978494039661 1.0069277339161753 1.1552870130398876 1.1176409797886644 0.7912606535079239 0.9049218125827232 0.8866968738938259 1.0 17.169595043867503 -6.756668320231405 24.999999608539788 0.8877966518724001 1.0421720882914252 0.32813606986042554 0.09850460168952799 138.88697817727044 727762.1570185847 0.0401216280517506 0.030045058176039325 1.7511835935426073e-07 6.756668320231405 0.15437543641902507 APSQAAESS(ph)PAKK ddPTM_KYSE-520_SHP099_60min_R1 1 APSQAAESSPAKK 13 1 Q8NFH8-3;Q8NFH8-2;Q8NFH8-4;Q8NFH8 Q8NFH8-3 REPS2 RalBP1-associated Eps domain-containing protein 2 1 APSQAAES(0.331)S(0.669)PAKK 82.01 0.0047913999999999995 691080000.0 332540.0 326260.0 271370.0 272360.0 276850.0 391180.0 277950.0 326240.0 403160.0 411190.0 True False 314093.34329794487 310585.979873756 288862.9444073522 298245.0125119803 298636.51993897656 388738.5005191468 306047.89853058814 325108.3495849886 329956.3068365452 407547.1765009788 0.7706919871083697 0.7620859566254659 0.7087840649207845 0.7318048797996372 0.732765523007517 0.9538490828391573 0.7509508498088027 0.7977195483875663 0.8096149988558508 1.0 18.63660754571811 -6.151635120301227 18.49836553900971 0.8429744280680349 0.7400442808688613 0.40525453506291786 0.07148774258940349 4.32558048577159 719.1935075913955 0.02287735645596151 0.02287748637305976 7.05285377299309e-07 6.151635120301227 -0.1029301471991736 APSQVSISAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 APSQVSISASPR 12 0 A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-5;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1;Q8IVL1-7;Q8IVL1-6 A0A0A0MTL4 NAV2 Neuron navigator 2 1 APSQVSIS(0.001)AS(0.999)PR 114.33 0.00042084 0.0 175340.0 159980.0 161030.0 87018.0 105160.0 145140.0 109790.0 131810.0 167640.0 133350.0 True False 165613.54066837576 152294.32066512437 171410.25145710987 95288.16455708438 113435.49372144761 144234.1274230507 120888.64464714275 131352.7818746854 137200.8018604983 132168.6227447301 1.2530473362671035 1.1522728882426578 1.2969057851814867 0.7209590489652263 0.8582634165791106 1.0912887221471912 0.9146546444735719 0.9938272726680341 1.0380739317038004 1.0 17.012020191497914 -5.239870814231836 24.99080739035134 0.9462181176982492 1.2258951163262473 0.6241886568651072 0.10262361578494163 561.0967014271265 650124.1577337045 0.028810557185569786 0.04984335788406993 5.756111338661582e-06 5.239870814231836 0.2796769986279981 APSS(ph)PVAK ddPTM_KYSE-520_SHP099_60min_R1 3 APSSPVAK 8 0 Q9GZR2;A0A0C4DG31;Q9GZR2-2 Q9GZR2 REXO4 RNA exonuclease 4 1 APS(0.005)S(0.995)PVAK;APS(0.006)S(0.994)PVAK;APS(0.004)S(0.996)PVAK 134.23 0.0007494 1918240000.0 5742400.0 4749900.0 3674770.0 3986600.0 4156200.0 5873700.0 4997600.0 5755100.0 4959600.0 6071800.0 True False 5423857.624809406 4521707.674254751 3911651.5540398904 4365485.265384999 4483269.294456826 5837040.0595616065 5502806.17987576 5735136.901350439 4059061.661341726 6018008.575788926 0.9012711691090219 0.7513627834373734 0.6499910235716299 0.7254036298565276 0.7449755576111147 0.9699288370981433 0.9143898867166992 0.9529958007078105 0.6744858552830504 1.0 22.520854731867697 -6.244023159546724 23.688372408300676 0.9001741717915267 0.7469871902238748 0.34625877032323205 0.10122212599849285 476.3726747000803 647929.6049447467 0.033445977134704916 0.03335606041165482 5.701338680398996e-07 6.244023159546724 -0.15318698156765187 APSS(ph)PVAKPGPVK ddPTM_KYSE-520_SHP099_60min_R1 5 APSSPVAKPGPVK 13 1 Q9GZR2;A0A0C4DG31;Q9GZR2-2 Q9GZR2 REXO4 RNA exonuclease 4 1 APS(0.036)S(0.964)PVAKPGPVK;APS(0.083)S(0.917)PVAKPGPVK;APS(0.174)S(0.826)PVAKPGPVK;APS(0.029)S(0.971)PVAKPGPVK;APS(0.028)S(0.972)PVAKPGPVK 117.0 7.9089e-05 4467710000.0 10978000.0 10204600.0 8349500.0 7348700.0 8167200.0 10456100.0 8789800.0 10250800.0 11726500.0 11018500.0 True False 10369028.45589956 9714355.698583128 8887722.129672348 8047118.238532788 8809912.174988654 10390839.601406643 9678358.764181208 10215242.367354708 9597263.201008895 10920884.662263284 0.9494678111315797 0.8895209499053431 0.8138280372453293 0.7368558946821689 0.8067031607275353 0.9514650069798657 0.8862247943726044 0.9353859768021453 0.8787990623298025 1.0 23.38058639282869 -6.261585206568754 24.99994871921098 0.923577206915254 0.8349629125303704 0.3549511231898501 0.06092301889731712 17.363660020393173 2976539.036577514 0.022415100395596785 0.02105384337215707 5.475386658692062e-07 6.261585206568754 -0.08861429438488366 APSVANVGS(ph)HCDLSLKIPEISIQDMTAQVTSPSGK ddPTM_KYSE-520_SHP099_60min_R1 2 APSVANVGSHCDLSLKIPEISIQDMTAQVTSPSGK 35 1 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 APS(0.029)VANVGS(0.839)HCDLS(0.132)LKIPEISIQDMTAQVTSPSGK;APS(0.15)VANVGS(0.416)HCDLS(0.416)LKIPEIS(0.014)IQDMT(0.004)AQVTSPSGK 195.74 9.1861e-16 703540000.0 395650.0 472320.0 391030.0 360130.0 371660.0 404610.0 333280.0 517080.0 512780.0 445650.0 True False 373702.5057912789 449629.03823322663 416236.4194701213 394356.64692296716 400907.52754386823 402084.67890754074 366971.19489935075 515286.37016737927 419672.0781318671 441701.88771045324 0.8460514120244158 1.017946834150661 0.9423469336471906 0.8928117762120091 0.9076427760405527 0.9103078118858242 0.8308119234027581 1.1665930902816575 0.950125163166549 1.0 18.752713472503558 -7.250093196862187 24.997839674704476 1.0437693536858053 0.9121082537786384 0.42468578380701083 0.07018190405323568 656.3826202742864 1446142.3344002552 0.03206039925307558 0.018278936099055558 5.622206632286848e-08 7.250093196862187 -0.1316610999071669 APT(ph)TDEDKKAAEK ddPTM_KYSE-520_SHP099_60min_R1 1 APTTDEDKKAAEK 13 2 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 APT(0.756)T(0.244)DEDKKAAEK 76.051 0.035268 531030000.0 243570.0 240430.0 217640.0 192740.0 213910.0 187250.0 176960.0 199300.0 239190.0 232890.0 True False 230058.6865552429 228879.38190721237 231669.422636312 211057.95165060606 230743.5000185891 186081.30329313912 194848.8437631691 198608.6748169697 195759.12548921828 230826.775785678 0.9966724431001528 0.9915633969593121 1.0036505593762501 0.9143564516387508 0.9996392283052716 0.806151290983309 0.8441344947957238 0.8604230342903428 0.8480780655662759 1.0 17.816451060000094 -6.2508373303927955 24.909817000616314 0.861307385996991 0.9792898183255679 0.5081521803726614 0.05331531557664869 513.4960003408886 1206474.1526700035 0.016818844029186812 0.016651170496324218 5.612581618672995e-07 6.2508373303927955 0.11798243232857697 APTLAELDS(ph)S(ph)ES(ph)EEETLHK ddPTM_KYSE-520_SHP099_60min_R1 3 APTLAELDSSESEEETLHK 19 0 Q08AE8-5;Q08AE8-2;Q08AE8;J3KNG6;Q08AE8-4;Q08AE8-3 Q08AE8-5 SPIRE1 Protein spire homolog 1 3 APT(0.001)LAELDS(0.999)S(1)ES(1)EEETLHK;APTLAELDS(1)S(1)ES(0.997)EEET(0.003)LHK;APTLAELDS(1)S(1)ES(0.999)EEET(0.001)LHK 126.04 9.9353e-06 979310000.0 1098530.0 1062040.0 964320.0 1038890.0 996830.0 983980.0 925300.0 1092020.0 1216850.0 1012400.0 True False 1037592.3510347364 1011018.004245461 1026481.6101665522 1137625.7932463326 1075274.8498131472 977838.6158311524 1018838.3540577575 1088232.0374993843 995900.714292216 1003430.9236352821 1.0340446228980988 1.0075611389199488 1.0229718717933876 1.1337360314996894 1.071598277953788 0.9744951972265191 1.0153547494496746 1.08451116251917 0.9924955378933457 1.0 19.936509874057673 -6.226922119019194 24.96772249469839 1.0187772055764286 1.0541113804830846 0.1849829685028911 0.041859312285000755 1345.5803606785128 973313.4539023549 0.01494526896608918 0.014944238477944767 5.930316619811282e-07 6.226922119019194 0.035334174906656024 APTT(ph)DEDKKAAEK ddPTM_KYSE-520_SHP099_60min_R1 1 APTTDEDKKAAEK 13 2 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 APT(0.213)T(0.787)DEDKKAAEK 62.813 0.03234 0.0 486660.0 405810.0 381270.0 360970.0 338170.0 394610.0 323250.0 332860.0 470520.0 399350.0 True False 459663.9996673419 386314.2784667712 405847.27425356867 395276.4802704125 364782.05507590255 392147.0926168531 355927.26461598394 331705.3863501082 385085.42884396046 395812.06968959846 1.1613188047242142 0.9760042910508626 1.0253534576948096 0.998646859304705 0.9216041728135524 0.9907406131510352 0.8992329741109392 0.8380375732610589 0.9728996620692998 1.0 18.594456080293273 -1.0000000000030271 0.5168804170424599 0.927644283358125 8.521112203102234 0.581303047232266 0.05253757070571367 81.08032004870427 0.8231772971463266 0.027871932671582896 673.8302000516635 0.09999999999930298 1.0000000000030271 7.593467919744109 APTTAAAAAAGVS(ph)STK ddPTM_KYSE-520_SHP099_60min_R1 1 APTTAAAAAAGVSSTK 16 0 O15479 O15479 MAGEB2 Melanoma-associated antigen B2 1 APTTAAAAAAGVS(0.956)S(0.042)T(0.002)K 229.93 9.918700000000001e-19 497040000.0 405150.0 561900.0 484720.0 350810.0 338160.0 444960.0 349370.0 499330.0 555550.0 544880.0 True False 382675.521853498 534905.4805709049 515965.8267794216 384150.8769251273 364771.26813279476 442182.8395904683 384687.72912261775 497597.9407744977 454676.1242758282 540052.7871102252 0.708589106448577 0.9904688825570865 0.9553988778399037 0.7113209784189518 0.6754363218541166 0.818777071694324 0.71231505198047 0.9213875988625119 0.8419105226893838 1.0 19.04274090389834 -7.295182126654433 24.357139905302578 0.9112368565238741 0.8026277189498804 0.22172738351822474 0.10638910820996678 925.9456178497692 668386.3274313929 0.062216200501497405 0.02989104453591331 5.067781401513225e-08 7.295182126654433 -0.10860913757399371 APVDEDRLS(ph)PLVAADSLLEHVR ddPTM_KYSE-520_SHP099_60min_R1 7 APVDEDRLSPLVAADSLLEHVR 22 1 Q01094 Q01094 E2F1 Transcription factor E2F1 1 APVDEDRLS(1)PLVAADSLLEHVR;APVDEDRLS(1)PLVAADSLLEHVR;APVDEDRLS(1)PLVAADSLLEHVR;APVDEDRLS(1)PLVAADSLLEHVR;APVDEDRLS(1)PLVAADSLLEHVR;APVDEDRLS(1)PLVAADSLLEHVR;APVDEDRLS(1)PLVAADSLLEHVR 276.46 1.0195e-36 1175031000.0 302696.0 335333.0 347723.0 318402.0 274820.0 327951.0 256536.0 266797.0 380094.0 275696.0 True False 285904.8494704836 319223.0993349053 370137.780956471 348662.83034894767 296446.7704880964 325904.1361617535 282469.16243008844 265871.54347788816 311078.5109900033 273253.5479282424 1.0462987640532428 1.1682303917193224 1.3545580057890805 1.2759681731214265 1.0848780289796809 1.1926803462670403 1.033725507213784 0.9729847809614066 1.1384244169876025 1.0 18.05988070243006 -6.597649916463065 1.6362984448807802 1.0312222814501177 1.2047646289589165 0.3704053345585787 0.09285796039347252 0.41640493811783763 2.2696529625941793 0.04961540576516923 0.034736058951465316 2.525515763187479e-07 6.597649916463065 0.1735423475087987 APVHFVEPLS(ph)PTGVAGHR ddPTM_KYSE-520_SHP099_60min_R1 12 APVHFVEPLSPTGVAGHR 18 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 APVHFVEPLS(0.993)PT(0.007)GVAGHR;APVHFVEPLS(0.929)PT(0.071)GVAGHR;APVHFVEPLS(0.919)PT(0.081)GVAGHR;APVHFVEPLS(0.974)PT(0.026)GVAGHR;APVHFVEPLS(0.976)PT(0.024)GVAGHR;APVHFVEPLS(0.996)PT(0.004)GVAGHR;APVHFVEPLS(0.84)PT(0.16)GVAGHR;APVHFVEPLS(1)PTGVAGHR;APVHFVEPLS(0.988)PT(0.012)GVAGHR;APVHFVEPLS(1)PTGVAGHR;APVHFVEPLS(0.997)PT(0.003)GVAGHR;APVHFVEPLS(0.999)PT(0.001)GVAGHR 293.01 9.0841e-38 34100460000.0 4036373.0 4324769.0 4116743.0 4515248.0 4380140.0 4632438.0 4554690.0 5840330.0 5981370.0 5247650.0 True False 3812467.3433799143 4117000.605629391 4382114.840801693 4944375.812361189 4724832.098412519 4603525.236126377 5015122.514690718 5820071.2583732745 4895303.986067334 5201159.903609923 0.7330032942716929 0.7915543228678551 0.842526459869122 0.950629456504402 0.9084189269268951 0.8850958865793088 0.9642315575050704 1.1189948715735099 0.9411946713404626 1.0 22.31040196192063 -3.644431596085623 0.3319910270008126 1.0263828754007898 0.3466652541138469 0.7274580250093623 0.054190594914076275 5.537050537184658 0.3585102803352247 0.055487691017964066 1.6364619454965972 0.00022676102108555343 3.644431596085623 -0.6797176212869429 APVPEPGLDLS(ph)LSPRPDSPQPR ddPTM_KYSE-520_SHP099_60min_R1 1 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 APVPEPGLDLS(0.5)LS(0.5)PRPDSPQPR 83.934 0.0028335 502630000.0 67041.0 77469.0 67228.0 63505.0 58621.0 101380.0 55245.0 86940.0 87873.0 72456.0 True False 63322.10208707986 73747.27295666025 71561.6244486032 69540.4961065254 63234.13919213553 100747.24981499852 60829.703739242126 86638.42543194864 71917.47829806469 71814.0962099151 0.881750316845695 1.026919182288313 0.9964843704142162 0.9683404759875571 0.8805254473620325 1.4028896154386015 0.8470440616760642 1.2064264539193186 1.0014395793250312 1.0 16.131979434407047 APVPEPGLDLSLS(ph)PRPDS(ph)PQPR ddPTM_KYSE-520_SHP099_60min_R1 2 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 2 APVPEPGLDLSLS(1)PRPDS(1)PQPR;APVPEPGLDLS(0.025)LS(0.975)PRPDS(1)PQPR 123.19 6.107e-05 817120000.0 295570.0 303040.0 321320.0 257480.0 283380.0 249660.0 240000.0 263220.0 279430.0 252980.0 True False 279174.1428958127 288481.5035276867 342032.80133017775 281950.82178581494 305680.39378835895 248101.77933332536 264261.54217428016 262306.95125600963 228692.55585706868 250738.79401546187 1.113406260056421 1.150526007195749 1.3641000495084388 1.1244802500263615 1.2191188642692008 0.9894830207966387 1.053931615217007 1.0461362881079919 0.9120748815716418 1.0 17.93582569998183 -6.262276644324157 24.995009691872042 1.0065590765178172 1.1974444821357468 0.6266907195827554 0.0747688410123933 52.71131607764229 1573576.163791336 0.025859570728246326 0.024146943002627083 5.466676262701572e-07 6.262276644324157 0.19088540561792966 APVPEPGLDLSLS(ph)PRPDSPQPR ddPTM_KYSE-520_SHP099_60min_R1 2 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 APVPEPGLDLS(0.001)LS(0.999)PRPDSPQPR;APVPEPGLDLS(0.003)LS(0.997)PRPDSPQPR 176.7 3.9808e-10 750330000.0 464080.0 515310.0 464810.0 398240.0 430390.0 547210.0 374340.0 597060.0 673110.0 614830.0 True False 438336.5572794557 490553.7341039205 494772.39632229507 436088.6098647777 464259.2444158787 543794.6594127562 412181.940406334 594988.9382148517 550890.191722262 609383.0845305016 0.7193119868385771 0.8050005760856769 0.8119234171120647 0.7156230964316339 0.7618512167490941 0.8923691405574903 0.6763921593325798 0.976379150191312 0.9040129365367838 1.0 19.216989928181818 -7.277192761470848 24.99982666355964 0.9551470570161222 0.7743916235193874 0.6704985561916166 0.06131084506032154 508.975600884106 807714.3362550525 0.032015798456472476 0.015459891725851955 5.282107535592098e-08 7.277192761470848 -0.18075543349673484 APVPEPGLDLSLSPRPDS(ph)PQPR ddPTM_KYSE-520_SHP099_60min_R1 4 APVPEPGLDLSLSPRPDSPQPR 22 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 APVPEPGLDLS(0.002)LS(0.007)PRPDS(0.991)PQPR;APVPEPGLDLSLS(0.001)PRPDS(0.999)PQPR;APVPEPGLDLSLSPRPDS(1)PQPR;APVPEPGLDLSLSPRPDS(1)PQPR 179.2 2.4396e-10 5872910000.0 3931700.0 4805050.0 3440730.0 2746460.0 2911170.0 4096870.0 2803370.0 3436700.0 4080970.0 3627100.0 True False 3713600.7633503643 4574208.185472908 3662524.961162649 3007482.732646688 3140262.5167085035 4071299.9146732315 3086761.9978546333 3424778.889831812 3339968.7208818756 3594966.7158411 1.0330000405807673 1.2723923604958047 1.018792453633536 0.8365815236603766 0.8735164369870358 1.1325000303154922 0.8586343746252003 0.9526594153822451 0.9290680512185038 1.0 21.77754698279451 -4.977119489300501 9.776779463127808 0.9392729305829203 1.1513524343472963 0.4371955673713128 0.0955719094921974 0.27287993229841345 109.17635267104836 0.024323802273547756 0.050222915543893853 1.0540968383137495e-05 4.977119489300501 0.212079503764376 APVPSTCSSTFPEELS(ph)PPSHQAK ddPTM_KYSE-520_SHP099_60min_R1 9 APVPSTCSSTFPEELSPPSHQAK 23 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;Q14980-4;Q14980-3;F5H6Y5;F5H4J1;F5H0Z7;F5H763 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 APVPSTCSSTFPEELS(0.997)PPS(0.003)HQAK;APVPSTCSSTFPEELS(0.827)PPS(0.173)HQAK;APVPSTCSSTFPEELS(0.999)PPS(0.001)HQAK;APVPSTCSSTFPEELS(0.999)PPS(0.001)HQAK;APVPSTCSSTFPEELS(1)PPSHQAK;APVPSTCSSTFPEELS(1)PPSHQAK;APVPSTCSSTFPEELS(1)PPSHQAK;APVPSTCSSTFPEELS(1)PPSHQAK;APVPSTCSSTFPEELS(1)PPSHQAK 300.5 6.5798000000000006e-49 86331100000.0 5709370.0 7033810.0 5425650.0 4772330.0 5184810.0 6052380.0 5064630.0 6158010.0 6916810.0 6802740.0 True False 5392659.864753074 6695895.20963595 5775396.080346933 5225890.808346664 5592825.0494665075 6014604.85140363 5576612.22642552 6136649.300600333 5660891.662590746 6742473.016051633 0.7998044414734633 0.9930918809308102 0.8565694021463037 0.7750703333784976 0.8294916473750524 0.8920473003132254 0.8270870662959158 0.9101481438621956 0.8395868473057297 1.0 22.6848464120088 -10.167575013707145 5.125562188370138 1.0000071406646616 0.8603587342233467 0.3434973961610095 0.058777362749695534 5.092993490776732e-06 8.270902220586145e-07 0.05710143902416293 0.013848383792249015 6.798686042546872e-11 10.167575013707145 -0.13964840644131482 APVQPQQS(ph)PAAAPGGTDEKPSGK ddPTM_KYSE-520_SHP099_60min_R1 9 APVQPQQSPAAAPGGTDEKPSGK 23 1 Q13200;C9JPC0;F8WBS8 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK;APVQPQQS(1)PAAAPGGTDEKPSGK 199.46 1.4849999999999999e-15 57705100000.0 16323960.0 16985100.0 13087500.0 11090540.0 11310220.0 16480830.0 12923390.0 15622440.0 17964590.0 17049810.0 True False 15418437.3977925 16169110.300845116 13931141.190740375 12144581.587107558 12200269.967651112 16377967.026716499 14229812.381331967 15568249.4019449 14702673.306460787 16898761.947951473 0.912400414023323 0.9568221832253926 0.8243882737474242 0.7186669428513824 0.7219623547114391 0.9691814747826478 0.8420624200258028 0.9212656791009555 0.8700444063148126 1.0 24.010414218590135 -6.284134346833095 24.98031918569913 0.9106868704628653 0.8279220838298019 0.24863874178534096 0.08049842469355398 1479.5860690603351 1628573.129109715 0.03128291091031656 0.027606349025725174 5.198351632418487e-07 6.284134346833095 -0.08276478663306341 APVS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 7 APVSPLK 7 0 Q9UBS0 Q9UBS0 RPS6KB2 Ribosomal protein S6 kinase beta-2 1 APVS(1)PLK;APVS(1)PLK;APVS(1)PLK;APVS(1)PLK;APVS(1)PLK;APVS(1)PLK;APVS(1)PLK 115.71 0.0027404 25172100000.0 30164950.0 32697700.0 25058560.0 21414580.0 23720060.0 32452200.0 26678440.0 33818800.0 38086800.0 35384500.0 True False 28491640.091162965 31126853.41175169 26673874.872713592 23449815.244671762 25586693.77332028 32249653.78226765 29375357.07168335 33701490.47616723 31171197.210095573 35071020.858724445 0.8123983674708243 0.8875377063342146 0.7605673920974007 0.668637942965332 0.7295679779721954 0.9195527530315691 0.8375962932477852 0.9609497998910824 0.8888021063219569 1.0 25.0637760898517 -6.270802383061009 24.350418905400137 0.9137030717245863 0.7718261776053614 0.5601715425794932 0.06612225337873652 416.85453903591696 1084112.5552738803 0.025114360806527562 0.022459743023835483 5.360405164461461e-07 6.270802383061009 -0.14187689411922488 APYFSGSS(ph)TFSPTILSSDKETIEIIDLAK ddPTM_KYSE-520_SHP099_60min_R1 1 APYFSGSSTFSPTILSSDKETIEIIDLAK 29 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 APYFS(0.029)GS(0.061)S(0.344)T(0.299)FS(0.261)PT(0.006)ILSSDKETIEIIDLAK 139.91 1.3988999999999999e-06 39963000.0 43980.0 70656.0 49316.0 55326.0 48680.0 54404.0 43648.0 64288.0 72998.0 50592.0 True False 41540.3417280436 67261.57970318187 52494.98826838992 60584.166405631535 52510.83904868833 54064.44445586087 48060.36580342913 64064.99993293197 59743.40332982964 50143.79423998037 0.828424381474565 1.3413739570898533 1.0468890331105998 1.208208659194898 1.047205139630632 1.078188144222132 0.9584509216318917 1.2776256943446855 1.1914416177584615 1.0 15.613783544530634 -7.271969200800757 24.982678266955713 1.1759002198732367 1.0864648294103345 0.05565484790118458 0.14404139518617945 2035.4741493090685 4829263.9234062405 0.07327996357341747 0.03577756975066633 5.346022708573145e-08 7.271969200800757 -0.08943539046290216 APYFSGSSTFSPTILS(ph)SDKETIEIIDLAK ddPTM_KYSE-520_SHP099_60min_R1 1 APYFSGSSTFSPTILSSDKETIEIIDLAK 29 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 APYFS(0.003)GS(0.003)S(0.003)T(0.002)FS(0.002)PT(0.019)ILS(0.516)S(0.432)DKET(0.02)IEIIDLAK 69.482 0.016362 30655000.0 28281.0 33222.0 24023.0 24056.0 24623.0 21057.0 18284.0 22859.0 38661.0 22225.0 True False 26712.196553224196 31625.96525276134 25571.561018159027 26342.275007299882 26560.69001429441 20925.575452302437 20132.325154643924 22779.707464330702 31641.13696449965 22028.10379078835 1.2126416693385396 1.4357098347242487 1.16086074684524 1.1958485059579036 1.2057637945850557 0.9499490129083663 0.9139381830524514 1.034120216641464 1.4363985781532067 1.0 14.427057690776758 -5.499348389305455 1.292639460253021 1.0687909904993524 1.3052347025276032 0.2439354221667427 0.15169992325952475 0.6411940475216003 2.1702918887841087 0.05748797688931302 0.10861673164338995 3.167025868200331e-06 5.499348389305455 0.23644371202825076 APYS(ph)PTTSK ddPTM_KYSE-520_SHP099_60min_R1 7 APYSPTTSK 9 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 APYS(0.792)PT(0.205)T(0.003)SK;APYS(0.974)PT(0.026)TSK;APYS(0.661)PT(0.321)T(0.014)S(0.004)K;APYS(0.98)PT(0.016)T(0.003)SK;APY(0.004)S(0.952)PT(0.035)T(0.007)S(0.002)K;APYS(0.648)PT(0.276)T(0.063)S(0.013)K;APY(0.003)S(0.798)PT(0.17)T(0.026)S(0.004)K 135.86 0.00048072 7817590000.0 12381690.0 11601450.0 9299450.0 7347820.0 8090010.0 11072430.0 8664180.0 10224610.0 12037150.0 11253000.0 True False 11694852.973412903 11044098.927868515 9898907.426646078 8046154.603597359 8726647.761139663 11003322.85726063 9540039.868648143 10189143.214351913 9851506.991858125 11153307.17470152 1.0485547282280312 0.9902084426509192 0.8875311395618394 0.721414238625835 0.782426918262762 0.9865524803458214 0.8553552519639495 0.9135535366105069 0.8832812400436525 1.0 23.410968225216976 -4.685394349570876 3.364055164225698 0.8688780890606606 1.0357512643616453 0.34056863981028473 0.07937846773349519 0.2588569069612817 5.670960003761958 0.02178278039656932 0.06758378081767288 2.0635055934117714e-05 4.685394349570876 0.16687317530098478 APYSPT(ph)TSK ddPTM_KYSE-520_SHP099_60min_R1 1 APYSPTTSK 9 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 APYS(0.147)PT(0.816)T(0.036)S(0.001)K 91.63600000000001 0.018366999999999998 2468200000.0 3497500.0 3748900.0 3032500.0 2485500.0 2632400.0 3370500.0 2776200.0 2955900.0 3698500.0 3088400.0 True False 3303486.702906604 3568797.216786374 3227979.8021715544 2721721.1727071796 2839554.9036928318 3349463.459276504 3056845.389100985 2945646.6728122453 3026945.631597784 3061039.1787388413 1.0792043191905998 1.1658776671577038 1.0545372383967635 0.8891494076951142 0.9276440900905876 1.0942243021719489 0.9986299457821431 0.9623028327346865 0.9888621003684428 1.0 21.545590079595975 -5.005025440479908 9.749594161928162 0.9810882280090377 1.1196405712788382 0.5339218847245142 0.05381542515191411 0.09857375045552438 142.51687452505263 0.015041399243521941 0.02902032917197065 9.884951880299897e-06 5.005025440479908 0.13855234326980048 APYTCGGDSDQYVLMSS(ph)PVGR ddPTM_KYSE-520_SHP099_60min_R1 2 APYTCGGDSDQYVLMSSPVGR 21 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 APYTCGGDSDQYVLMS(0.061)S(0.939)PVGR;APYTCGGDSDQYVLMS(0.003)S(0.997)PVGR 226.75 1.8124000000000002e-19 707880000.0 515100.0 524200.0 444470.0 404830.0 443520.0 505750.0 440620.0 432970.0 489660.0 469260.0 True False 486526.37617360766 499016.6451597587 473121.24737714446 443304.92148342245 478422.5007163977 502593.4266515626 485162.1696367972 431468.12812595774 400750.0873240967 465102.72147875594 1.0460622002527462 1.0729170613605017 1.0172403332169166 0.9531333639028617 1.028638360135354 1.0806073657311832 1.0431290707013365 0.9276835163512702 0.8616378034726279 1.0 18.827189856037496 -7.27661737561909 8.649914004671528 0.9207494684201157 1.0337791584372504 0.5254978311426944 0.04537342055456914 0.180390955521844 88.00259780244751 0.02484258194232342 0.01244437799429845 5.289110305078128e-08 7.27661737561909 0.1130296900171347 AQAVS(ph)EDAGGNEGR ddPTM_KYSE-520_SHP099_60min_R1 1 AQAVSEDAGGNEGR 14 0 P55884;P55884-2;C9JZG1 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 1 AQAVS(1)EDAGGNEGR 172.93 1.9209e-08 9243400.0 23045.0 23015.0 21362.0 18315.0 20766.0 22956.0 19489.0 22136.0 25329.0 21953.0 True False 21766.647910931442 21909.32485378069 22739.02870040849 20055.652093394456 22400.166057622464 22812.723088904153 21459.138314310607 22059.215382581246 20729.892092129317 21758.51349917555 1.0003738496086232 1.0069311423600171 1.0450635196779454 0.9217381552353924 1.0294897240324448 1.0484504416980758 0.986241009300737 1.0138199644666483 0.9527255661520623 1.0 14.409292377285567 -7.740391656140404 24.992296583277792 0.9763627527516886 1.0064745836271813 0.10364223860354416 0.03546724589357153 478.6391333874459 568345.0305934808 0.02370725248498136 0.008939781465637427 1.818060552830238e-08 7.740391656140404 0.03011183087549274 AQAVS(ph)EEEEEEEGK ddPTM_KYSE-520_SHP099_60min_R1 4 AQAVSEEEEEEEGK 14 0 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVS(1)EEEEEEEGK;AQAVS(1)EEEEEEEGK;AQAVS(1)EEEEEEEGK;AQAVS(1)EEEEEEEGK 267.38 3.0914e-22 1460420000.0 4619040.0 4375980.0 3487120.0 3280671.0 3383556.0 4256850.0 3988350.0 5079370.0 4677250.0 4628770.0 True False 4362812.643372042 4165751.352320112 3711905.33478927 3592464.985470301 3649822.6073998245 4230281.420151667 4391531.340544958 5061750.851003868 3827979.3038774454 4587762.698928567 0.9509673733541057 0.9080136933178754 0.8090883461902147 0.783053793586423 0.7955561015072139 0.9220793876587412 0.9572272213579318 1.1033157517467058 0.8343891249587599 1.0 22.12935933950684 -6.5617347805269794 3.170558542788699 0.9821590375254251 0.8470049476860488 0.36005557557949663 0.07776989304381615 0.272227748706294 5.63988179691377 0.032278327079066776 0.025016530033857315 2.743248936298351e-07 6.5617347805269794 -0.13515408983937627 AQAVS(ph)EEEEEEEGKSSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 2 AQAVS(1)EEEEEEEGKS(0.037)S(0.148)S(0.815)PK 93.76799999999999 0.0008581 1026700000.0 1518800.0 1591600.0 1358900.0 1273300.0 1404000.0 1365800.0 1130400.0 1286400.0 1835100.0 1480500.0 True False 1434549.1363472613 1515137.1469596934 1446496.868316875 1394314.049168395 1514486.812332751 1357275.5355822148 1244671.8636408597 1281937.7786480156 1501892.0991064194 1467383.921811572 0.9776235891805505 1.0325431023458178 0.9857657882274526 0.9502039844126356 1.0320999091110579 0.9249627963120777 0.8482250930651052 0.8736212518025874 1.0235168021006016 1.0 20.484814952011906 -6.324516554907686 9.11707946590506 0.9206449737387739 0.9945874239064552 0.22504848696198565 0.05434635775269144 0.5826780330002332 80.82831491604927 0.019218463288293405 0.01694832973031791 4.7367825164958623e-07 6.324516554907686 0.0739424501676813 AQAVSEEEEEEEGKSS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVSEEEEEEEGKS(0.029)S(0.847)S(0.124)PK 70.569 0.014738 0.0 190480.0 239870.0 213620.0 189100.0 175500.0 178670.0 180060.0 190960.0 249280.0 175220.0 True False 179913.69468753386 228346.2851477898 227390.2870040848 207072.0071450117 189310.85154159387 177554.85425572886 198262.22201625397 190297.60433039925 204017.03583741948 173667.68711909716 1.0359652833065793 1.3148461232813873 1.3093413678512684 1.1923462019909707 1.0900752735410648 1.0223827886529402 1.1416183707236827 1.0957571180175716 1.1747552997438693 1.0 17.405969823363407 -5.669080237316878 4.164924179316782 1.0915277870261548 1.2322229668909792 0.33715601343813506 0.08610513697284407 0.24345500175868087 7.779791892931965 0.025966069909112634 0.03365511509548343 2.14249473168786e-06 5.669080237316878 0.14069517986482438 AQAVSEEEEEEEGKSSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 AQAVSEEEEEEEGKSSSPK 19 1 G3V529;Q9GZR7-2;Q9GZR7 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 AQAVSEEEEEEEGKS(0.013)S(0.198)S(0.789)PK 86.791 0.00045969 0.0 296520.0 290040.0 232160.0 215480.0 205700.0 225180.0 232040.0 238780.0 315190.0 269240.0 True False 280071.4445020345 276106.04304108437 247125.40506913356 235959.1544135759 221887.41972709924 223774.56809372015 255496.8676921666 237951.7279116707 257959.4412933096 266854.74306555005 1.0495276991694238 1.0346679240895555 0.9260671263708055 0.884223198369815 0.8314913843318683 0.8385632030484551 0.9574379857636874 0.8916900826949902 0.9666661282836729 1.0 18.02569512839499 -4.78736686465854 3.523582718923069 0.9013813336061541 1.0476714078656473 0.5044917590430641 0.05136104318341268 0.16887626772321945 4.338569558292898 0.013943142359190561 0.03672691220467165 1.6316730308308756e-05 4.78736686465854 0.14629007425949314 AQDT(ph)IS(ph)RGSDDSVPVISFK ddPTM_KYSE-520_SHP099_60min_R1 2 AQDTISRGSDDSVPVISFK 19 1 F5H7T0;F6RJM5;Q96S38-2;Q96S38;A0A087X1U5 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 2 AQDT(0.795)IS(0.708)RGS(0.496)DDSVPVISFK;AQDT(0.856)IS(0.801)RGS(0.342)DDSVPVISFK 115.88 3.3011e-05 508370000.0 1092620.0 981120.0 859280.0 788320.0 900520.0 888150.0 726130.0 764060.0 1021940.0 810970.0 True False 1032010.1905160291 933985.5225088568 914670.563696612 863241.6957829488 971385.800742088 882606.7264074848 799534.3067458749 761409.6541929442 836381.4570109608 803785.4367251133 1.2839374083720385 1.1619836337346712 1.137953640244194 1.0739703114055907 1.2085138102275574 1.0980625998942148 0.9947111134576425 0.9472797333765811 1.0405531361934777 1.0 19.616450912800385 -4.79351608524313 0.3090050785177525 0.9660731676803841 1.3909998229914515 0.6902068393580887 0.05544544181170953 3.400920401320428 0.3409982929523876 0.06990999469473322 0.5316922910863869 1.6087327931176297e-05 4.79351608524313 0.42492665531106744 AQDT(ph)ISRGSDDSVPVISFK ddPTM_KYSE-520_SHP099_60min_R1 1 AQDTISRGSDDSVPVISFK 19 1 F5H7T0;F6RJM5;Q96S38-2;Q96S38;A0A087X1U5 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 AQDT(0.456)IS(0.319)RGS(0.225)DDSVPVISFK 143.19 6.9003e-06 503010000.0 483360.0 494260.0 423330.0 430800.0 442840.0 492880.0 438490.0 440910.0 646570.0 510140.0 True False 456547.05724572827 470515.00770061486 450618.52915194904 471743.1024752572 477688.9885850681 489803.7530954467 482816.8484500004 439380.58611916745 529169.1867033064 505620.5564829149 0.9029440187745911 0.9305693798794625 0.8912187674615947 0.9329982660449795 0.9447578474812454 0.9687180373015497 0.9548995630408372 0.8689927268295593 1.0465737199931016 1.0 18.94769559327835 -6.8246277500454635 0.15722613087900053 1.0335720782735773 0.8617197479482908 0.33400689934993544 0.04062951669758225 7.52955779654748 0.8425977500938338 0.31922920244525016 0.47486675739868234 1.4975186851169255e-07 6.8246277500454635 -0.17185233032528657 AQDTISRGS(ph)DDSVPVISFK ddPTM_KYSE-520_SHP099_60min_R1 1 AQDTISRGSDDSVPVISFK 19 1 F5H7T0;F6RJM5;Q96S38-2;Q96S38;A0A087X1U5 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 AQDT(0.29)IS(0.198)RGS(0.511)DDSVPVISFK 163.62 7.57e-09 767260000.0 726900.0 685940.0 725380.0 581450.0 714520.0 777860.0 728710.0 698640.0 1066100.0 718040.0 True False 686577.4079607748 652986.4127830693 772139.1554490353 636710.8331806832 770748.6589373215 773005.0872074841 802375.1183242487 696216.5809038011 872523.1141939698 711678.7242266664 0.9647294271819529 0.9175297652639903 1.0849546700838462 0.894660485842898 1.0830008439199057 1.0861714154058166 1.1274400807697829 0.9782737030116125 1.2260070232422393 1.0 19.440866581401462 -5.792362065395133 23.300344724543997 1.0847283919674449 0.9705791611571978 0.3495220437282661 0.07873650452502612 105.42440889466279 79436.69823238604 0.02288165684959335 0.025949660539399448 1.6130132489431174e-06 5.792362065395133 -0.11414923081024708 AQESGQGSTAGPLRPPPPGAGGPAT(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 AQESGQGSTAGPLRPPPPGAGGPATPSK 28 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AQESGQGSTAGPLRPPPPGAGGPAT(1)PSK 180.31 1.9639e-10 505420000.0 118940.0 171470.0 145560.0 116370.0 109350.0 142860.0 96410.0 171070.0 171620.0 168740.0 True False 112342.16109898819 163232.32381828284 154943.0305042346 127429.76981208386 117955.22288360861 141968.3577487738 106156.0636709265 170476.59809803808 140458.1341881336 167245.0948777333 0.6717217098720736 0.9760066442463736 0.9264428987738488 0.7619342732009154 0.7052836017094631 0.8488641048191076 0.6347334954638476 1.019321961117408 0.8398341027030859 1.0 17.351604373199855 -7.2872828108228385 24.91609818906691 0.9471835184889554 0.7997496521334196 0.3106993239670671 0.11091560925543462 1059.9895680588643 1021948.1075697711 0.06112988695973163 0.02938237948101726 5.16080190476934e-08 7.2872828108228385 -0.1474338663555358 AQGEPVAGHES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 11 AQGEPVAGHESPK 13 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0YAB3 D6REX3 SEC31A Protein transport protein Sec31A 1 AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK;AQGEPVAGHES(1)PK 189.56 1.6799999999999998e-08 37905570000.0 37109590.0 31152950.0 27347730.0 30625600.0 31030550.0 33868960.0 32168050.0 35595880.0 34633260.0 33117430.0 True False 35051047.06656638 29656315.520468693 29110608.433715116 33536247.816077612 33472477.745321997 33657571.257587224 35419910.423914 35472406.20042083 28344733.01743685 32824035.335170664 1.0678469819038212 0.9034938945697579 0.8868686660997881 1.0216978952659066 1.019755109435205 1.0253940721762334 1.0790845812294712 1.0806838902714822 0.8635359037365439 1.0 24.968249276620917 -5.303712764783674 23.783140365561675 1.0198072015926083 0.9478122357595424 0.1211150153320758 0.07221785777321629 469.26090891283565 264006.39502657764 0.02027436890257155 0.030072112518357993 4.969208680672088e-06 5.303712764783674 -0.07199496583306586 AQGEPVAGHES(ph)PKIPYEK ddPTM_KYSE-520_SHP099_60min_R1 13 AQGEPVAGHESPKIPYEK 18 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0YAB3 D6REX3 SEC31A Protein transport protein Sec31A 1 AQGEPVAGHES(0.999)PKIPY(0.001)EK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(0.997)PKIPY(0.003)EK;AQGEPVAGHES(0.945)PKIPY(0.055)EK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK;AQGEPVAGHES(1)PKIPYEK 225.17 8.351899999999999e-19 157536300000.0 66788310.0 57132750.0 56360510.0 48468350.0 52484040.0 56088210.0 49764810.0 54180360.0 69548740.0 50521130.0 True False 63083429.30510488 54388006.93199392 59993598.65460439 53074767.41145925 56614235.354661405 55738142.67652492 54795522.65254184 53992420.976951025 56920441.99706101 50073552.09304439 1.2598153449926246 1.0861623483577239 1.1981095038579852 1.0599361378006125 1.130621515515085 1.1131253994714585 1.094300690926086 1.0782622506313266 1.1367366527402336 1.0 25.57754546445551 -1.0000000000000002 0.08007897009426755 0.9301453728323356 1.6041306186500532 0.4721531853172831 0.05005182897145384 179.75935063337482 1.0516385140164832 1.334267989216347 13.409645895303006 0.09999999999999995 1.0000000000000002 0.6739852458177177 AQGQES(ph)DSSETSVR ddPTM_KYSE-520_SHP099_60min_R1 1 AQGQESDSSETSVR 14 0 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1;H7C5W4 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 AQGQES(0.98)DS(0.01)S(0.01)ET(0.001)S(0.001)VR 67.605 0.02572 23607000.0 27841.0 23570.0 26376.0 21861.0 22341.0 21333.0 24361.0 27569.0 29314.0 24000.0 True False 26296.604230342455 22437.661820708716 28076.239163092145 23938.6628672507 24099.109597098322 21199.852833925437 26823.647620448515 27473.369573652966 23991.316545804362 23787.378671717455 1.1054855851606886 0.9432591178021008 1.1802998367564572 1.0063598514834724 1.0131048876668158 0.8912227415428285 1.1276420151473479 1.1549557415638259 1.0085733647621031 1.0 14.537908677555507 -9.544237994698026 8.609156648803719 0.9999970183252231 1.0473398122829345 0.02552969862221388 0.08868398191577472 0.0 0.0 0.08594961580746875 0.020845843791497124 2.8560250040583305e-10 9.544237994698026 0.04734279395771135 AQGVRS(ph)PLLR ddPTM_KYSE-520_SHP099_60min_R1 9 AQGVRSPLLR 10 1 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 1 AQGVRS(1)PLLR;AQGVRS(1)PLLR;AQGVRS(1)PLLR;AQGVRS(1)PLLR;AQGVRS(1)PLLR;AQGVRS(1)PLLR;AQGVRS(1)PLLR;AQGVRS(1)PLLR;AQGVRS(1)PLLR 138.89 0.00016719 24778930000.0 13645010.0 13267050.0 14318770.0 9659660.0 11458030.0 11398980.0 9865760.0 9965740.0 15804280.0 10681010.0 True False 12888094.094646938 12629681.003751945 15241780.82504202 10577711.182117311 12359711.77372723 11327834.73758307 10863087.301338866 9931171.173961194 12934621.145477418 10586384.561100047 1.2174216816196706 1.1930117341627702 1.4397531789132572 0.9991807043346407 1.167510182762803 1.0700380920609573 1.026137605208068 0.9381079174521534 1.221816671293619 1.0 23.33570663160179 -5.2798303432530345 24.997943646539895 1.0612569664348857 1.2743571699416092 0.5143471115570803 0.09917953816766525 643.5548647255383 874751.4755865505 0.027370225277366805 0.04068666490402491 5.250125158597363e-06 5.2798303432530345 0.21310020350672354 AQHEDQVEQYKK ddPTM_KYSE-520_SHP099_60min_R1 9 AQHEDQVEQYKK 12 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;H0YAB0 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ;;;;;;;; 230.06 2.682e-11 28499520000.0 35058230.0 33306320.0 23029450.0 21755790.0 34326530.0 33042860.0 24270980.0 30093060.0 30261080.0 26553170.0 False True 33113480.095051162 31706234.39339446 24513965.195422817 23823453.74048323 37027832.61976115 32836627.254113443 26724527.520337947 29988674.19863302 24766430.69174832 26317929.57185367 1.2582099212874691 1.2047389330847453 0.9314549280365828 0.9052176264641192 1.40694322167962 1.247690368821085 1.015449465634224 1.1394769530314843 0.9410478367658284 1.0 24.64954266111488 -7.624070177051567 1.9429621454191277 0.9717079074477041 1.1405626917556195 0.15539865859661084 0.148783817622062 0.7327462378247372 5.047591949507489 0.14490749119782875 0.044584928480659064 2.3764562472815893e-08 7.624070177051567 0.16885478430791545 AQIS(ph)SPNLR ddPTM_KYSE-520_SHP099_60min_R1 4 AQISSPNLR 9 0 H0Y507;Q5TCZ1-2;Q5TCZ1-3;Q5TCZ1 H0Y507 SH3PXD2A SH3 and PX domain-containing protein 2A 1 AQIS(0.536)S(0.464)PNLR;AQIS(0.919)S(0.081)PNLR;AQIS(0.533)S(0.467)PNLR;AQIS(0.898)S(0.102)PNLR 173.64 6.3974e-05 7502900000.0 13839400.0 14335900.0 12482100.0 10259700.0 11430800.0 12942500.0 10479900.0 12851000.0 15080800.0 13391500.0 True False 13071700.893840082 13647181.845375383 13286716.138066126 11234778.803308707 12330338.927644739 12861721.056723393 11539310.565967653 12806422.880445944 12342506.876030792 13272861.728429347 0.9848442002406764 1.0282019149001058 1.0010438148095149 0.8464473625340917 0.9289887275201697 0.9690239618163636 0.8693913040057839 0.9648577030690879 0.9299054814678123 1.0 23.661976124316983 -5.0399681312457645 24.853867570077437 0.9271383088744659 1.008548036168174 0.37836099274416746 0.04392147552997756 432.2463076923873 268788.6563096378 0.011429673292651247 0.019800439780710218 9.120777656396327e-06 5.0399681312457645 0.0814097272937081 AQISS(ph)PNLR ddPTM_KYSE-520_SHP099_60min_R1 1 AQISSPNLR 9 0 H0Y507;Q5TCZ1-2;Q5TCZ1-3;Q5TCZ1 H0Y507 SH3PXD2A SH3 and PX domain-containing protein 2A 1 AQIS(0.206)S(0.794)PNLR 80.706 0.010228000000000001 305900000.0 1376500.0 1304700.0 1132100.0 1005000.0 988770.0 1215400.0 1052100.0 1107000.0 1447300.0 1261700.0 True False 1300142.8010152807 1242020.2536053753 1205076.9774240458 1100514.8978357324 1066580.573668273 1207814.23777026 1158456.5355065023 1103160.0753757434 1184506.8034639652 1250522.3195877455 1.0396798047106375 0.9932011881361917 0.9636589115988897 0.8800441868151019 0.8529080664628906 0.9658478052342442 0.9263781360483081 0.8821594449744948 0.9472096458497891 1.0 20.25409937660011 -4.7827700657472025 2.193006327587894 0.9167709317395971 1.0299627172523171 0.4436499639535876 0.042257123457298464 0.27786918842645125 2.5810330927767633 0.011672545955684864 0.04057325076047953 1.649035230906989e-05 4.7827700657472025 0.11319178551272002 AQKLPDLS(ph)PVENK ddPTM_KYSE-520_SHP099_60min_R1 8 AQKLPDLSPVENK 13 1 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3;H7C5N8;A0A2R8YET2;A0A2R8Y7F4 E7EPN9 PRRC2C Protein PRRC2C 1 AQKLPDLS(1)PVENK;AQKLPDLS(1)PVENK;AQKLPDLS(1)PVENK;AQKLPDLS(1)PVENK;AQKLPDLS(1)PVENK;AQKLPDLS(1)PVENK;AQKLPDLS(1)PVENK;AQKLPDLS(1)PVENK 186.94 1.9007e-08 4560630000.0 8967260.0 9528380.0 9305220.0 6649280.0 7635650.0 7195830.0 5685640.0 6502510.0 10803030.0 7304720.0 True False 8469828.212010363 9070622.322410047 9905049.37007842 7281225.572021078 8236532.214094431 7150918.155812395 6260399.977699068 6479954.310507245 8841472.074224634 7240005.863786171 1.169864827648227 1.2528473723730595 1.368099633678827 1.005693325255589 1.1376416496142345 0.9876950779253668 0.8646954291864597 0.8950205887151788 1.2211968112413896 1.0 22.78755943509285 -5.27663117927033 24.41880828418419 1.0092033708201107 1.2625282813623737 0.5259767417130901 0.10758394373445689 452.3151749738052 727035.8809673684 0.03152881467467862 0.04697618641967334 5.288942198236314e-06 5.27663117927033 0.253324910542263 AQLDYVDLYLIHSPMSLKPGEELS(ph)PTDENGK ddPTM_KYSE-520_SHP099_60min_R1 4 AQLDYVDLYLIHSPMSLKPGEELSPTDENGK 31 1 S4R3D5;S4R3Z2;A0A0A0MSS8;P42330 S4R3D5 AKR1C3 Aldo-keto reductase family 1 member C3 1 AQLDYVDLYLIHSPMS(0.002)LKPGEELS(0.797)PT(0.202)DENGK;AQLDYVDLYLIHSPMS(0.003)LKPGEELS(0.977)PT(0.02)DENGK;AQLDYVDLYLIHSPMSLKPGEELS(0.994)PT(0.006)DENGK;AQLDYVDLYLIHSPMSLKPGEELS(0.999)PT(0.001)DENGK 262.25 1.8784e-41 2952538000.0 1687810.0 2080816.0 1530620.0 2325213.0 1789255.0 1953265.0 1821762.0 1744639.0 2123202.0 1592012.0 True False 1594183.8147341788 1980850.4759915066 1629286.2142785906 2546200.5444192206 1930059.18903165 1941073.9486081353 2005923.4816437536 1738587.254510805 1737682.0383668193 1577908.0122465948 1.0103147980498628 1.2553649899851957 1.0325609614966367 1.6136558814946316 1.2231759862120666 1.2301565956588763 1.2712550199854544 1.1018305509682014 1.1012568697795897 1.0 20.58958167192275 -7.603806066927731 1.5971883608359903 1.0193045253572357 1.2417093535621118 0.19443606295813898 0.15585312137751497 0.6250939860710883 2.898584294245671 0.14246016074551407 0.04507416946044995 2.4899689592316536e-08 7.603806066927731 0.22240482820487606 AQLEPLQQHLQDS(ph)QQEISSMQMK ddPTM_KYSE-520_SHP099_60min_R1 2 AQLEPLQQHLQDSQQEISSMQMK 23 0 P42566;P42566-2 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 AQLEPLQQHLQDS(1)QQEISSMQMK;AQLEPLQQHLQDS(0.996)QQEIS(0.003)S(0.001)MQMK 108.73 9.2558e-07 1192800000.0 79739.0 921480.0 366214.0 151323.0 702980.0 347751.0 420180.0 387100.0 731650.0 178440.0 True False 75315.71871424445 877210.717630322 389820.74040311755 165704.692423081 758300.5265909387 345580.55701731646 462655.8949616212 385757.24044981896 598800.8033955712 176859.16042421927 0.42585138668299727 4.9599393976892125 2.204130899796667 0.9369302219100053 4.287595422097776 1.9539873206929026 2.6159566394631866 2.1811549909234613 3.385749440171892 1.0 17.4322414198332 -9.817610391615563 7.204572679205655 0.999999995188875 2.5880465309075817 0.11071096083432574 1.3140664761483756 9.374834228783875e-08 1.7197125294379205e-08 1.1878071278489624 0.2880855398826523 1.5219122347926163e-10 9.817610391615563 1.5880465357187068 AQLEPVAS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 10 AQLEPVASPAK 11 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK;AQLEPVAS(1)PAK 201.65 2.8480999999999997e-07 219583200000.0 231924700.0 277145700.0 184477700.0 146283800.0 159419400.0 225026000.0 173936700.0 216123000.0 237644300.0 231461200.0 True False 219059374.56057256 263831204.5678233 196369427.71675637 160186568.37017176 171964799.80769232 223621529.26484358 191519919.0946046 215373319.75648767 194494085.64529225 229410633.84208852 0.9548789037885616 1.1500391248185455 0.8559735197450543 0.6982525861483555 0.7495938480605123 0.9747653171943643 0.8348345318048097 0.9388114062085577 0.8477989114452709 1.0 27.773357025063284 -4.78086506846146 24.742692305612568 0.8534409454079864 1.0524589628524919 0.3685660106708787 0.09888535534923482 185.89302958613482 236774.10383463008 0.026283067274613457 0.05484479063566098 1.6562844767967525e-05 4.78086506846146 0.19901801744450542 AQLEPVAS(ph)PAKK ddPTM_KYSE-520_SHP099_60min_R1 1 AQLEPVASPAKK 12 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 AQLEPVAS(1)PAKK 100.41 0.00084102 0.0 351590.0 331480.0 229990.0 173170.0 205710.0 281310.0 203560.0 254860.0 295210.0 337980.0 True False 332086.6018227112 315555.2032383759 244815.5233970107 189628.02473454093 221898.20667020688 279554.2399433535 224137.8313541519 253975.950144771 241607.30563849694 334985.7601444609 0.9913454281743216 0.9419958720104828 0.730823672300086 0.5660778674674554 0.6624108635976479 0.834525741699579 0.6690965946059725 0.7581693921414605 0.7212464957743429 1.0 18.35374024402033 -4.730942594628925 4.692529315908731 0.7248654733075341 0.9762408246192761 0.3924764599125664 0.11021428991962545 0.16702845530862367 8.598602060464763 0.027626455163030802 0.07351357662063768 1.8580500373113368e-05 4.730942594628925 0.25137535131174193 AQLEPVAS(ph)PAKKPK ddPTM_KYSE-520_SHP099_60min_R1 2 AQLEPVASPAKKPK 14 2 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 AQLEPVAS(1)PAKKPK;AQLEPVAS(1)PAKKPK 157.51 3.0221999999999996e-07 4902500000.0 7074500.0 9181600.0 8296200.0 3684000.0 4350000.0 4816900.0 3307700.0 3493700.0 8288700.0 4221200.0 True False 6682063.382333882 8740502.154137436 8830986.32638933 4034126.252365009 4692320.251885663 4786835.940361668 3642074.5960411085 3481581.170135707 6783681.0211233 4183803.4520439003 1.5971265043699687 2.08912829063886 2.1107555428004523 0.9642246101198253 1.1215441417529637 1.144134994683646 0.8705176134079284 0.8321569619707784 1.6214148439046032 1.0 21.996383647146597 -5.263773398035227 24.999800737914953 1.0679305310926317 1.9480159567793698 0.7197893207834294 0.24381906000950773 101.13262071404164 1083240.2221606574 0.06690522826927782 0.10480125599859634 5.447868322900351e-06 5.263773398035227 0.8800854256867381 AQLGGPEAAKS(ph)DETAAK ddPTM_KYSE-520_SHP099_60min_R1 5 AQLGGPEAAKSDETAAK 17 1 P04792;C9J3N8 P04792 HSPB1 Heat shock protein beta-1 1 AQLGGPEAAKS(0.977)DET(0.023)AAK;AQLGGPEAAKS(1)DETAAK;AQLGGPEAAKS(0.79)DET(0.21)AAK;AQLGGPEAAKS(0.998)DET(0.002)AAK;AQLGGPEAAKS(1)DETAAK 240.01 1.8706e-21 1839340000.0 1653420.0 1444562.0 1184948.0 1221691.0 1281701.0 1221299.0 1146817.0 1387090.0 1581090.0 1226008.0 True False 1561701.4965889454 1375163.0731882337 1261331.6440638346 1337800.1453252078 1382563.5768188774 1213676.4199231383 1262748.4542153403 1382278.508539241 1294003.9120354021 1215146.52293979 1.2851960377673128 1.131684983849781 1.0380078618110262 1.1009373109085505 1.1377751988904656 0.9987901845671293 1.0391738200924012 1.1375406030830837 1.0648953748432193 1.0 20.21269885449142 -4.319383842525344 2.7146538857773646 1.0702858413845269 1.3125739994944385 0.6642437490336304 0.04733098487136002 0.23389157923881718 2.5134063608722443 0.012324884714974527 0.11925724846678686 4.7930963310392856e-05 4.319383842525344 0.24228815810991167 AQLGINEDHS(ph)EGDEK ddPTM_KYSE-520_SHP099_60min_R1 9 AQLGINEDHSEGDEK 15 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1;C9JLY8 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 AQLGINEDHS(1)EGDEK;AQLGINEDHS(1)EGDEK;AQLGINEDHS(1)EGDEK;AQLGINEDHS(1)EGDEK;AQLGINEDHS(1)EGDEK;AQLGINEDHS(1)EGDEK;AQLGINEDHS(1)EGDEK;AQLGINEDHS(1)EGDEK;AQLGINEDHS(1)EGDEK 319.11 5.4829e-43 5951390000.0 4173820.0 3708540.0 3372670.0 3804280.0 3942160.0 3839970.0 3931690.0 4069850.0 4189770.0 3903140.0 True False 3942289.884296114 3530376.1717679757 3590077.7046627994 4165837.6274015107 4252385.564177836 3816003.322865453 4329143.594796651 4055732.640260128 3429013.383506677 3868561.216196973 1.019058420942249 0.912581183150708 0.9280136733087709 1.0768441791640506 1.0992163045976524 0.9864140980601601 1.1190577976823275 1.0483826967192613 0.8863795069727765 1.0 21.883365672590845 -5.254166904180828 24.82749547931776 1.0375814439249855 0.9491540978294819 0.2123566686809869 0.06757150508672362 730.3202520479786 2493233.9649767797 0.01850356382482843 0.031244150511602748 5.569716574172091e-06 5.254166904180828 -0.08842734609550362 AQLGINEDHS(ph)EGDEKSEK ddPTM_KYSE-520_SHP099_60min_R1 14 AQLGINEDHSEGDEKSEK 18 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1;C9JLY8 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 AQLGINEDHS(0.905)EGDEKS(0.095)EK;AQLGINEDHS(0.997)EGDEKS(0.003)EK;AQLGINEDHS(0.999)EGDEKS(0.001)EK;AQLGINEDHS(1)EGDEKSEK;AQLGINEDHS(1)EGDEKSEK;AQLGINEDHS(1)EGDEKSEK;AQLGINEDHS(1)EGDEKSEK;AQLGINEDHS(1)EGDEKSEK;AQLGINEDHS(1)EGDEKSEK;AQLGINEDHS(1)EGDEKSEK;AQLGINEDHS(1)EGDEKSEK;AQLGINEDHS(1)EGDEKSEK;AQLGINEDHS(0.999)EGDEKS(0.001)EK;AQLGINEDHS(1)EGDEKSEK 232.82 1.2368e-23 17794690000.0 11429450.0 10887870.0 10570620.0 10400010.0 10888170.0 9800940.0 9225630.0 9926040.0 13141050.0 10062450.0 True False 10795435.624456286 10364800.382173939 11252019.078789989 11388423.823522981 11745007.033787113 9739768.697985895 10158246.713872112 9891608.883995153 10754966.57891254 9973304.521467641 1.0824331695897784 1.0392543775098413 1.1282137284156821 1.1418907142571735 1.1776444816766463 0.9765839072717515 1.0185437225952925 0.9918085688352705 1.0783754327126343 1.0 23.249640170922234 -6.271996358394357 24.995428108900775 1.0128929480408384 1.1120926809730465 0.586870345717776 0.04228353483069086 576.7810925448332 1365622.2210041522 0.015860955377190688 0.014125334798863614 5.345688417950452e-07 6.271996358394357 0.09919973293220807 AQLGINEDHSEGDEKSEKETIMAHQPT(ph)DVESTLLQLQEQNTAIR ddPTM_KYSE-520_SHP099_60min_R1 1 AQLGINEDHSEGDEKSEKETIMAHQPTDVESTLLQLQEQNTAIR 44 2 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 AQLGINEDHS(0.221)EGDEKS(0.221)EKET(0.221)IMAHQPT(0.337)DVESTLLQLQEQNTAIR 111.04 3.3819e-05 351180000.0 152760.0 221580.0 197460.0 171790.0 179830.0 129980.0 127320.0 116810.0 269950.0 136700.0 True False 144286.0982804896 210934.9642016395 210188.58754717084 188116.8699494531 193981.59790726408 129168.7466063671 140190.74812345553 116404.81337365892 220933.8848857165 135488.94435099064 1.064928942886362 1.5568426280981442 1.5513338638366476 1.3884296674577912 1.4317153243496046 0.953352668183385 1.0347024902658082 0.8591462124917487 1.630641422029067 1.0 17.047815609553048 -6.248664041166351 24.12827624970438 1.0829610700009513 1.4153532250464587 0.29701293894573677 0.2320250884530952 576.5965283443973 1088994.9459214334 0.07494001925694951 0.07442602312204757 5.640738398389571e-07 6.248664041166351 0.33239215504550734 AQLLHALS(ph)LDEGGPEPEPSLSDSSSGGSFGR ddPTM_KYSE-520_SHP099_60min_R1 1 AQLLHALSLDEGGPEPEPSLSDSSSGGSFGR 31 0 O15049 O15049 N4BP3 NEDD4-binding protein 3 1 AQLLHALS(1)LDEGGPEPEPSLSDSSSGGSFGR 115.21 0.00018375 97362000.0 20015.0 18528.0 12425.0 21083.0 15837.0 19392.0 22560.0 15508.0 22768.0 26873.0 True False 18904.728051086684 17637.887068905005 13225.935380702898 23086.721981164923 17083.28179979615 19270.967334902845 24840.58496438234 15454.206367594417 18633.905134573026 26634.926126877624 0.7097721225518886 0.6622089727182086 0.4965636216785466 0.8667837812348138 0.6413864907459685 0.7235224623152335 0.9326320203049261 0.5802233613856128 0.6996041605600448 1.0 14.701031659076817 -13.999999999999996 0.23637388713556529 2.638973900613371 0.6708662049109358 0.35949005511347976 0.11962073812370244 190.69866034830505 1.9064603305693086 150.30077591038543 0.197035894632071 1.0000000000000082e-14 13.999999999999996 -1.968107695702435 AQLS(ph)PGIYDDTSAR ddPTM_KYSE-520_SHP099_60min_R1 4 AQLSPGIYDDTSAR 14 0 A0A088AWL3;O75376-2;O75376;E7EVK1 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 AQLS(0.999)PGIY(0.001)DDTSAR;AQLS(1)PGIYDDTSAR;AQLS(0.874)PGIY(0.125)DDTSAR;AQLS(1)PGIYDDTSAR 173.28 1.8554e-08 2433450000.0 2199650.0 2293340.0 1943460.0 1610710.0 1866650.0 2296420.0 2060250.0 2489560.0 2876420.0 2433600.0 True False 2077631.0296064375 2183164.5040264814 2068738.5412459457 1763791.394122381 2013544.7352143405 2282087.1909662527 2268520.1761023365 2480924.2974276734 2354134.6366474233 2412040.197312149 0.861358376996221 0.9051111612730522 0.8576716688018878 0.7312446103045287 0.8347890459943946 0.9461232003966147 0.9404984952697953 1.0285584378702664 0.9759931195469906 1.0 21.201822519671484 -6.473608660235958 2.2533550803144813 0.9907371603165989 0.8370532168088433 0.7027977881646501 0.04608148787993437 0.1937399096846745 1.9566090225165256 0.0215797627692424 0.017287623202542183 3.3604028143808454e-07 6.473608660235958 -0.1536839435077556 AQPFGFIDS(ph)DT(ph)DAEEERIPATPVVIPMK ddPTM_KYSE-520_SHP099_60min_R1 5 AQPFGFIDSDTDAEEERIPATPVVIPMK 28 1 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 2 AQPFGFIDS(1)DT(1)DAEEERIPATPVVIPMK;AQPFGFIDS(1)DT(1)DAEEERIPATPVVIPMK;AQPFGFIDS(1)DT(1)DAEEERIPATPVVIPMK;AQPFGFIDS(1)DT(1)DAEEERIPATPVVIPMK;AQPFGFIDS(1)DT(1)DAEEERIPATPVVIPMK 276.69 1.2447999999999998e-41 2057720000.0 2163093.0 2003948.0 1954642.0 1993020.0 1857004.0 1875429.0 1841107.0 2209666.0 2430896.0 2306116.0 True False 2043101.9192710102 1907675.3300927267 2080641.3508577775 2182436.021576688 2003139.6498925705 1863723.751955935 2027224.0630327633 2202001.1843859227 1989506.5643013446 2285685.6063711 0.8938683052367683 0.8346184290504736 0.910292012627728 0.9548277398664913 0.8763845930118458 0.8153893723445638 0.8869216559714498 0.963387605997992 0.87042004322721 1.0 21.124195545351547 -9.05967044841013 0.5512035825161846 1.0094468099942742 0.8838031687681625 0.3643238631754748 0.04381578272827424 5.534606642991796 1.9401861436702097 0.16421204520855492 0.02105569524071973 8.716247458686412e-10 9.05967044841013 -0.1256436412261117 AQPFGFIDS(ph)DT(ph)DAEEERIPATPVVIPMKK ddPTM_KYSE-520_SHP099_60min_R1 1 AQPFGFIDSDTDAEEERIPATPVVIPMKK 29 2 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 2 AQPFGFIDS(1)DT(1)DAEEERIPATPVVIPMKK 103.96 0.006168899999999999 279360000.0 142610.0 168410.0 202170.0 98627.0 140420.0 103500.0 90485.0 116890.0 240460.0 110900.0 True False 134699.1390140131 160319.33081143646 215202.20168343725 108000.48042671112 151470.25511949102 102854.01810862443 99632.10684849902 116484.53587233103 196798.52550331288 109917.51227889454 1.225456583044201 1.458542205764783 1.9578518219863188 0.9825593591736381 1.3780356922122143 0.9357382274778212 0.9064261443226782 1.0597450165791047 1.7904201198074285 1.0 16.7460617321087 -5.288726869009203 24.94284085586203 1.143279943533983 1.53840959682931 0.26694324837185224 0.3011083959889226 944.2391174937486 863104.422912296 0.08565673288824499 0.12708545235717553 5.1436703909175035e-06 5.288726869009203 0.395129653295327 AQPFGFIDS(ph)DTDAEEERIPATPVVIPMK ddPTM_KYSE-520_SHP099_60min_R1 10 AQPFGFIDSDTDAEEERIPATPVVIPMK 28 1 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 AQPFGFIDS(0.997)DT(0.003)DAEEERIPATPVVIPMK;AQPFGFIDS(0.997)DT(0.003)DAEEERIPATPVVIPMK;AQPFGFIDS(0.945)DT(0.055)DAEEERIPATPVVIPMK;AQPFGFIDS(0.998)DT(0.002)DAEEERIPATPVVIPMK;AQPFGFIDS(0.989)DT(0.011)DAEEERIPATPVVIPMK;AQPFGFIDS(0.972)DT(0.028)DAEEERIPATPVVIPMK;AQPFGFIDS(0.629)DT(0.371)DAEEERIPATPVVIPMK;AQPFGFIDS(0.981)DT(0.019)DAEEERIPATPVVIPMK;AQPFGFIDS(0.95)DT(0.05)DAEEERIPATPVVIPMK;AQPFGFIDS(0.958)DT(0.042)DAEEERIPATPVVIPMK 269.65 2.4093e-41 5983614000.0 2721122.0 2790347.0 2520707.0 2160116.0 2446549.0 2625028.0 2333842.7 2564905.0 3115024.0 2325147.0 True False 2570175.938237774 2656294.5417237617 2683195.8064938015 2365412.7751774443 2639078.4873403753 2608644.2265473036 2569770.296225777 2556007.943208325 2549414.164964784 2304548.0065169944 1.115262485732393 1.1526314636154547 1.1643045833308896 1.0264107184959181 1.145160994640757 1.1319548211494663 1.1150864676972512 1.1091146445985205 1.1062534422174484 1.0 21.136052390391065 -13.999999999946663 0.2561388298612532 0.24671287230384234 1.128886433001161 0.5088943603317011 0.03540610004006559 159.4856763827956 1.5750806739854406 63.019086196477794 0.04941740313682363 1.0000000001228127e-14 13.999999999946663 0.8821735606973187 AQPFGFIDS(ph)DTDAEEERIPATPVVIPMKK ddPTM_KYSE-520_SHP099_60min_R1 1 AQPFGFIDSDTDAEEERIPATPVVIPMKK 29 2 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 AQPFGFIDS(0.995)DT(0.005)DAEEERIPATPVVIPMKK 145.1 9.606900000000001e-07 817080000.0 135300.0 180610.0 130480.0 98893.0 73826.0 132560.0 101870.0 99270.0 165230.0 83345.0 True False 127794.63928613695 171933.22449886292 138890.9495753815 108291.76098673526 79635.68618751988 131732.6438693648 112168.01375539135 98925.6555397921 135228.39710934224 82606.62814142887 1.5470264573363623 2.0813490196513054 1.6813535753764162 1.3109330742967922 0.9640350656992983 1.5946982322511511 1.3578573085364425 1.19755106539906 1.6370163042827615 1.0 16.333969923943915 -5.171962388811014 3.9325930165255856 1.3036125659585458 1.8250385830150968 0.4603598053571969 0.2375880851929215 0.19645500986540518 5.585519476008888 0.0636820754001349 0.11552785181774082 6.730349405806013e-06 5.171962388811014 0.521426017056551 AQPS(ph)MSPK ddPTM_KYSE-520_SHP099_60min_R1 1 AQPSMSPK 8 0 Q969S3 Q969S3 ZNF622 Zinc finger protein 622 1 AQPS(0.753)MS(0.247)PK 63.216 0.047764999999999995 1031400000.0 4346400.0 4226900.0 3853500.0 3446100.0 3972000.0 4189800.0 3714700.0 4229200.0 4836600.0 3882700.0 True False 4105296.5276664053 4023833.379293747 4101902.775818004 3773616.307892257 4284573.802411462 4163649.904072605 4090218.1279783286 4214529.892302701 3958395.36076405 3848302.298694887 1.0667811957128928 1.0456126018630056 1.0658993128500125 0.9805924833846968 1.1133672642776873 1.0819446033344795 1.062863000488679 1.0951660148247753 1.028608215655641 1.0 21.875790702033456 -3.2071723951379774 13.06441995061856 1.057443625208133 1.0663409115083808 0.0 0.03939049447930678 0.0 0.0 0.008711735370307748 0.0 0.0006206226263982355 3.2071723951379774 0.008897286300247886 AQPSMS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 11 AQPSMSPK 8 0 Q969S3 Q969S3 ZNF622 Zinc finger protein 622 1 AQPS(0.002)MS(0.998)PK;AQPS(0.068)MS(0.932)PK;AQPS(0.104)MS(0.896)PK;AQPS(0.168)MS(0.832)PK;AQPS(0.012)MS(0.988)PK;AQPS(0.05)MS(0.95)PK;AQPSMS(1)PK;AQPS(0.006)MS(0.994)PK;AQPS(0.002)MS(0.998)PK;AQPS(0.001)MS(0.999)PK;AQPS(0.085)MS(0.915)PK 129.88 0.0008119999999999999 41265160000.0 55257930.0 51525030.0 44449000.0 39649220.0 43752090.0 48825430.0 41626310.0 46176780.0 55856110.0 45241860.0 True False 52192662.46894753 49049690.21815318 47314253.660914585 43417469.947827324 47195130.56766079 48520692.38049628 45834303.648436055 46016603.52792144 45714048.441948146 44841052.318034425 1.1639482075213563 1.0938568049266342 1.0551548461739706 0.9682526993320681 1.0524982828888605 1.0820596277795638 1.0221504911025951 1.0262159594638733 1.0194686805680209 1.0 25.418316799540325 -4.502787320353577 1.9326433983813849 1.0284630863589845 1.1728824100349413 0.6941439054531093 0.028947659927844642 0.2889049797784249 1.6375693232708883 0.00835027340181482 0.06282954558802474 3.142047018396206e-05 4.502787320353577 0.14441932367595678 AQPSSS(ph)EDELDNVFFK ddPTM_KYSE-520_SHP099_60min_R1 2 AQPSSSEDELDNVFFK 16 0 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 AQPSS(0.003)S(0.997)EDELDNVFFK;AQPSS(0.038)S(0.962)EDELDNVFFK 274.52 9.5745e-30 309650000.0 474910.0 407900.0 355680.0 294020.0 330360.0 401990.0 330110.0 341760.0 460930.0 384580.0 True False 448565.79559038626 388303.87172961794 378607.7019081217 321963.57239966345 356357.4525087239 399481.03129938105 363480.7403631316 340574.51432738366 377236.73109973414 381172.9203987126 1.1768039427385861 1.0187079169303166 0.9932701974528839 0.84466538720244 0.9348970859104277 1.0480309852061838 0.9535848978540377 0.8934908439223268 0.9896734812775756 1.0 18.540086104193087 -4.2646127782367325 1.8015542235953361 0.9510223011157909 1.249488055303696 0.6009481854629752 0.0542594493889346 0.6065947606999853 2.0050102448798466 0.015422104485511444 0.3080714777838182 5.437349154943478e-05 4.2646127782367325 0.2984657541879051 AQPYDPNFYDETYDYGGFTMMFDDRR ddPTM_KYSE-520_SHP099_60min_R1 6 AQPYDPNFYDETYDYGGFTMMFDDRR 26 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ;;;;; 149.32 2.389e-06 1112559000.0 734420.0 576728.0 433401.0 721754.0 431153.0 465446.0 458434.0 492093.0 456540.0 335694.0 False True 693680.2585700263 549021.1211936235 461338.72192611813 790349.283156747 465082.28817500203 462540.97886557266 504776.98260468285 490386.0442383694 373643.8444368398 332720.01232598006 2.0848768720602173 1.650099485617126 1.3865673985192235 2.3754185317305407 1.3978187994274927 1.3901808178956228 1.5171223969243282 1.4738699990126147 1.1229978077506348 1.0 18.34394911797995 -7.0639837312569895 0.37332254911221635 0.9597774918988805 1.9107529416622933 0.4849441432187708 0.28195790390656733 1.1603344761142784 0.44002496687766046 0.35684602832505974 0.37051677491294016 8.630108756913808e-08 7.0639837312569895 0.9509754497634128 AQQCVS(ph)PSSSLCR ddPTM_KYSE-520_SHP099_60min_R1 2 AQQCVSPSSSLCR 13 0 B9EGE7;Q8TCN5-2;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 AQQCVS(0.988)PS(0.012)SSLCR;AQQCVS(0.97)PS(0.03)SSLCR 209.21 1.3502999999999998e-09 324820000.0 327730.0 380420.0 286780.0 257191.0 265300.0 315610.0 255470.0 346050.0 370340.0 357540.0 True False 309550.16358644207 362144.05217793846 305266.29766422394 281634.35531270626 286177.6006494869 313640.1609204147 281295.40074693045 344849.6333186773 303095.59151167347 354372.4737619107 0.8735163888446285 1.0219305363464803 0.8614277921295904 0.7947410596623417 0.8075615964510795 0.8850579098057643 0.7937845672966182 0.9731275955433508 0.8553022990022408 1.0 18.434907019894418 -10.20824879538321 6.7271139758545 1.0000005916131645 0.8746170674259267 0.22391738867405053 0.07033727895041532 6.506110728004697e-07 7.650775301020576e-08 0.07099523916886583 0.0172187934999695 6.190863159199524e-11 10.20824879538321 -0.12538352418723775 AQQCVSPS(ph)SSLCR ddPTM_KYSE-520_SHP099_60min_R1 1 AQQCVSPSSSLCR 13 0 B9EGE7;Q8TCN5-2;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 AQQCVS(0.069)PS(0.856)S(0.069)S(0.006)LCR 244.57 5.4855e-16 700850000.0 242910.0 282090.0 183460.0 167710.0 175620.0 225300.0 195010.0 210040.0 280930.0 274680.0 True False 229435.29807092025 268537.9729742777 195286.12514637868 183649.10797614983 189440.2948588875 223893.8191292085 214723.51391419308 209311.42026370447 229920.19366899168 272246.54889780615 0.8427482331724394 0.9863778771905735 0.7173135010783321 0.6745690945198598 0.6958409413299786 0.8223935988744235 0.7887097734884212 0.7688303896269929 0.844529323144138 1.0 18.054554235336468 -8.126693725528838 3.266204198244009 0.9999403267318444 0.7861190953249844 0.36950914654105516 0.08387110718854342 0.6490638971204106 13.521330417455912 0.08892232908358354 0.02360066748107792 7.469753569293298e-09 8.126693725528838 -0.21382123140686005 AQQNTDKDAAAHLQTSHKPSAEDAEGQS(ph)PLSQK ddPTM_KYSE-520_SHP099_60min_R1 1 AQQNTDKDAAAHLQTSHKPSAEDAEGQSPLSQK 33 2 Q96F24-3;Q96F24 Q96F24-3 NRBF2 Nuclear receptor-binding factor 2 1 AQQNTDKDAAAHLQTSHKPSAEDAEGQS(1)PLSQK 240.54 2.6138e-31 1095900000.0 423110.0 482330.0 427600.0 796490.0 438320.0 404630.0 452290.0 417530.0 541560.0 361220.0 True False 399639.2448511261 459158.14280790946 455163.78018419055 872188.1701265496 472813.2903003511 402104.5540801227 498011.8871250222 416081.6858822342 443226.35561662685 358019.8718249072 1.1162487791922713 1.2824934562081092 1.2713366380031341 2.4361445795754624 1.3206342091859768 1.1231347355958372 1.3910174443294012 1.1621748361658613 1.2379937274358632 1.0 18.449680140662654 -5.98850859422291 24.999350640966657 1.207773363268593 1.5393298124780268 0.17652410583052525 0.34755775056755484 433.9766244753898 944102.5020534111 0.11320932760948653 0.12827019635553336 1.0268131119346916e-06 5.98850859422291 0.33155644920943383 AQQQEEQGS(ph)VNDVKEEEKEEK ddPTM_KYSE-520_SHP099_60min_R1 8 AQQQEEQGSVNDVKEEEKEEK 21 2 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 AQQQEEQGS(1)VNDVKEEEKEEK;AQQQEEQGS(1)VNDVKEEEKEEK;AQQQEEQGS(1)VNDVKEEEKEEK;AQQQEEQGS(1)VNDVKEEEKEEK;AQQQEEQGS(1)VNDVKEEEKEEK;AQQQEEQGS(1)VNDVKEEEKEEK;AQQQEEQGS(1)VNDVKEEEKEEK;AQQQEEQGS(1)VNDVKEEEKEEK 323.61 2.3912000000000003e-54 13706500000.0 5546980.0 4789080.0 4455270.0 4870170.0 5054130.0 4856850.0 4526980.0 4997080.0 5928160.0 4653840.0 True False 5239277.961769519 4559005.408244363 4742463.832884046 5333029.492529993 5451861.276933998 4826536.597592964 4984611.317467177 4979746.295807243 4851755.5807523895 4612610.598232733 1.1358595854106754 0.9883785572515251 1.0281517877752493 1.1561846331821897 1.1819470039423692 1.046378508396567 1.0806486286479444 1.0795939066946545 1.0518459075238829 1.0 22.137152072932757 -9.461034682229359 7.816646680278039 0.9999999765171458 1.0825955465401855 0.1619612127251615 0.05677508434090202 0.0 0.0 0.0581860662435306 0.014112193944780173 3.4591175263103445e-10 9.461034682229359 0.08259557002303974 AQRPQSCT(ph)SVGR ddPTM_KYSE-520_SHP099_60min_R1 2 AQRPQSCTSVGR 12 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 AQRPQS(0.001)CT(0.499)S(0.499)VGR;AQRPQS(0.252)CT(0.374)S(0.374)VGR 102.87 0.0034523 338410000.0 575510.0 537500.0 548290.0 535320.0 463650.0 468530.0 471480.0 507100.0 630040.0 518990.0 True False 543585.3130492583 511677.69319605123 583633.6506950177 586196.6518501738 500136.6171923647 465605.73047762143 519141.79960137326 505340.98845802987 515640.6180159169 514392.15236811026 1.0567527333897908 0.9947229770913836 1.1346083877993471 1.1395909699467552 0.9722866394634575 0.9051571419472664 1.0092335141805664 0.9824041563067953 1.002427069779465 1.0 18.97250910733212 -5.783121181185401 24.98622397484046 0.9755659818693105 1.0790254649866553 0.5368601952421724 0.0467200104207582 196.99423683128637 227016.08575899966 0.015587661122182305 0.017690268654143994 1.6477025689432702e-06 5.783121181185401 0.10345948311734476 AQRPQSCTS(ph)VGR ddPTM_KYSE-520_SHP099_60min_R1 1 AQRPQSCTSVGR 12 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 AQRPQS(0.025)CT(0.054)S(0.921)VGR 83.869 0.003243 379210000.0 70562.0 77085.0 73416.0 81001.0 56704.0 78812.0 61929.0 79855.0 86153.0 63961.0 True False 66647.7851981404 73381.72089305607 78148.51282975319 88699.31068616122 61166.2821983735 78320.10507417306 68189.38768879582 79578.0016432971 70509.78694039315 63394.355300904994 1.0513204982019742 1.1575434523270325 1.2327361396581247 1.3991673275190635 0.9648537619484288 1.2354428829258082 1.0756381599770346 1.2552852894484925 1.112240776102452 1.0 15.952066766571273 -5.775106124888754 24.99975968097116 1.1248375181834789 1.2080416303644717 0.14650108392319894 0.11715764598073238 563.2930131342415 1030394.9722277523 0.036278498451852464 0.041349608417100274 1.6783938330274804e-06 5.775106124888754 0.08320411218099277 AQRPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 AQRPSPK 7 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 AQRPS(1)PK;AQRPS(1)PK;AQRPS(1)PK;AQRPS(1)PK 75.509 0.013803 2666680000.0 2944830.0 2114370.0 1967910.0 2093220.0 2495320.0 2582280.0 2719950.0 2527500.0 3099340.0 2854030.0 True False 2781474.409526933 2012792.491465927 2094764.6273673265 2292158.99945046 2691687.4875713456 2566163.0326718716 2994909.0901538907 2518732.6924229367 2536577.984003318 2828745.514601744 0.9832890216419959 0.7115495123460429 0.7405277769082902 0.8103093712808488 0.9515481239570982 0.9071735224768563 1.0587410831742992 0.8904062523197837 0.896714805524116 1.0 21.43173096120982 -5.744001944126973 5.9645258032280495 0.9488676429098145 0.7981058941173617 0.40415941279613987 0.08230472610214548 0.16022526149413197 18.978675675878314 0.024761375968102444 0.030841713555078348 1.8030096696366475e-06 5.744001944126973 -0.15076174879245285 AQS(ph)ENLELLSLKR ddPTM_KYSE-520_SHP099_60min_R1 2 AQSENLELLSLKR 13 1 Q9BYI3-2;Q9BYI3 Q9BYI3-2 FAM126A Hyccin 1 AQS(1)ENLELLSLKR;AQS(1)ENLELLSLKR 202.35 4.9121e-09 1818520000.0 832710.0 824000.0 824550.0 757360.0 852000.0 703470.0 674600.0 697620.0 1001210.0 753310.0 True False 786517.9163337699 784413.8031507843 877701.8123266456 829339.2666914137 919047.5527831229 699079.3827910526 742795.1514615394 695200.1190457318 819415.5024501875 746636.2594663113 1.053415108577724 1.05059698508545 1.1755413713151552 1.1107674669915144 1.2309173859839724 0.936305160548656 0.9948554494158676 0.9311095064451523 1.0974761700374664 1.0 19.510046047479072 -6.277209857836657 24.996144661259596 0.9878252370472669 1.12225671558758 0.505252707472686 0.06537940361623594 697.2704882855612 1105167.4341987304 0.023079374072821252 0.020421680585293596 5.281899605100241e-07 6.277209857836657 0.13443147854031312 AQS(ph)LKAPSIATIK ddPTM_KYSE-520_SHP099_60min_R1 2 AQSLKAPSIATIK 13 1 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 AQS(1)LKAPSIATIK;AQS(1)LKAPSIATIK 129.11 3.0281e-05 1584370000.0 1546050.0 1591760.0 1309830.0 1356250.0 1412680.0 1597660.0 1363610.0 1726780.0 1825640.0 1699420.0 True False 1460287.5245257353 1515289.460319531 1394263.7376020988 1485147.5922285686 1523849.8789503092 1587688.411318114 1501457.0063511282 1720790.20321348 1494149.7966392245 1684364.4609287516 0.8669664780985339 0.8996208929058065 0.8277684372616765 0.8817257943151237 0.9047031769537958 0.942603841476606 0.8914086239525804 1.0216258079113374 0.8870703646972915 1.0 20.683772910272275 -6.6383803391169645 0.4992192894185876 0.9834707809732554 0.8576246687663137 0.4783525351438539 0.040849491344015755 0.8229326440527686 0.44140141982098785 0.03743002611633956 0.03672922294042351 2.2994271817022468e-07 6.6383803391169645 -0.12584611220694164 AQS(ph)PGAVEEILDR ddPTM_KYSE-520_SHP099_60min_R1 8 AQSPGAVEEILDR 13 0 H7BXT7;E9PHY4;A0A0C4DH16;B8ZZS0;Q9NYM9 H7BXT7 BET1L BET1-like protein 1 AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR;AQS(1)PGAVEEILDR 235.4 9.5854e-16 2239184000.0 2257340.0 2362220.0 1853767.0 1608671.0 1760937.0 2134500.0 1705564.0 2157160.0 2478890.0 2047300.0 True False 2132120.85030427 2248735.4054354914 1973263.78695207 1761558.608175427 1899512.7235390332 2121177.7937474293 1877979.05382056 2149677.315444931 2028786.0637316273 2029162.5147753 1.0507393246126329 1.1082086274812275 0.9724523159598087 0.868121008223185 0.9361067483298037 1.0453464314967984 0.9254946511903798 1.0593913990585304 0.999814479598883 1.0 20.952452983887092 -4.77084754864744 24.775386545476884 0.9733800314099411 1.079473975500122 0.3604859703274137 0.05513484919252538 169.95518131230986 447562.0610808761 0.015197397872844307 0.032325923481888785 1.6949326719964038e-05 4.77084754864744 0.1060939440901808 AQS(ph)PPVPAR ddPTM_KYSE-520_SHP099_60min_R1 2 AQSPPVPAR 9 0 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 AQS(1)PPVPAR;AQS(1)PPVPAR 91.93700000000001 0.0038404000000000003 665720000.0 1145840.0 1267430.0 1172760.0 902450.0 942490.0 1144800.0 955460.0 1016310.0 1199330.0 1182590.0 True False 1082277.9710245887 1206540.7603487845 1248357.9860823452 988218.5766685145 1016658.600965454 1137654.8785580029 1052047.2211909918 1012784.6578185372 981561.904648957 1172113.1726410976 0.923356205088895 1.0293722385442627 1.065049020197808 0.8431084981681272 0.867372387492787 0.9706015640064427 0.8975645404790019 0.8640672944033648 0.8374292922902867 1.0 20.160680444310813 -5.263422196631829 24.99954037060019 0.8933348546168307 1.0082704633357256 0.41103829567249917 0.059517874854074164 164.07901065258267 2068729.4141700263 0.0166007894756251 0.02604160113985286 5.452275638451616e-06 5.263422196631829 0.11493560871889485 AQS(ph)PSYVISTGVSPSR ddPTM_KYSE-520_SHP099_60min_R1 3 AQSPSYVISTGVSPSR 16 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 AQS(0.84)PS(0.14)Y(0.02)VISTGVSPSR;AQS(0.911)PS(0.089)YVISTGVSPSR;AQS(0.882)PS(0.118)YVISTGVSPSR 185.2 4.8012e-12 1623040000.0 759030.0 949220.0 847630.0 672600.0 738520.0 825870.0 712070.0 809950.0 1099560.0 825100.0 True False 716925.0928112074 903618.0463917321 902269.5860559529 736523.7017754369 796637.3223959996 820715.4389890772 784052.984733499 807140.4724937509 899907.6216519283 817790.2559180864 0.8766613292626684 1.1049508597742972 1.10330195245849 0.9006266538949939 0.9741340357518204 1.003576935589318 0.9587458141736936 0.9869773657153941 1.1004137248390828 1.0 19.641371347496243 -7.72537647064438 24.853160951328007 1.0502070371845098 0.9924086748809948 0.10022763595949946 0.0731076564651781 359.45957321463976 247726.097921698 0.049850109861824574 0.018840188575194053 1.8820169450706903e-08 7.72537647064438 -0.05779836230351498 AQS(ph)SPAAPASLSAPEPASQAR ddPTM_KYSE-520_SHP099_60min_R1 5 AQSSPAAPASLSAPEPASQAR 21 0 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;Q8WUI4-10;H0YI15 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 AQS(0.919)S(0.081)PAAPASLSAPEPASQAR;AQS(0.912)S(0.088)PAAPASLSAPEPASQAR;AQS(0.5)S(0.5)PAAPASLSAPEPASQAR;AQS(0.5)S(0.5)PAAPASLSAPEPASQAR;AQS(0.5)S(0.5)PAAPASLSAPEPASQAR 377.73 3.340099999999999e-79 3989100000.0 955094.0 1254560.0 897643.0 752251.0 739366.0 1309470.0 946059.0 1114370.0 1273160.0 1288310.0 True False 902113.031887313 1194289.0544670483 955506.5040595813 823744.7088674894 797549.8977829188 1301297.1120067663 1041695.8763660721 1110504.5105659121 1041986.2377518016 1276896.5756900136 0.7064887235677848 0.9353060202402644 0.7483037563502287 0.645114666724164 0.6246002322873614 1.0191092503349906 0.8158028584289664 0.8696902566018818 0.816030254594997 1.0 20.28421024567123 -6.258233236994296 24.99829008996954 0.8904619337795329 0.7393424842428116 0.4175084948901988 0.10084656858804174 349.13905096664945 2722244.567596065 0.03575465893857324 0.03432217955772678 5.517810267826796e-07 6.258233236994296 -0.1511194495367213 AQS(ph)SPASATFPVSVQEPPTKPR ddPTM_KYSE-520_SHP099_60min_R1 5 AQSSPASATFPVSVQEPPTKPR 22 1 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 AQS(0.974)S(0.025)PASATFPVSVQEPPTKPR;AQS(0.974)S(0.026)PASATFPVSVQEPPTKPR;AQS(0.86)S(0.139)PASAT(0.001)FPVSVQEPPTKPR;AQS(0.97)S(0.03)PASATFPVSVQEPPTKPR;AQS(0.803)S(0.113)PAS(0.031)AT(0.053)FPVSVQEPPTKPR 208.96 1.7767e-19 10293930000.0 1825630.0 1904630.0 1628280.0 1398260.0 1468470.0 1893120.0 1421310.0 1836250.0 2175530.0 1802110.0 True False 1724358.6645968226 1813128.715892084 1733241.5341401128 1531150.2099978018 1584030.23454863 1881304.3358627937 1564989.8854488595 1829880.4773339718 1780508.5926483502 1786144.7074203638 0.9654081539044082 1.0151074033137504 0.970381362125661 0.8572374923693403 0.8868431700790709 1.0532765503528905 0.8761831440348936 1.0244861291091993 0.9968445363085091 1.0 20.768417536804947 -7.319615190668881 24.99956353126744 1.0079990527065883 0.9483134604945473 0.18514298850537347 0.058304683475255026 513.7321992618205 220760.55982264172 0.03290874237700496 0.015808858972700027 4.790543734382612e-08 7.319615190668881 -0.05968559221204095 AQS(ph)TDS(ph)LGTSGSLQSK ddPTM_KYSE-520_SHP099_60min_R1 1 AQSTDSLGTSGSLQSK 16 0 Q15276-2;Q15276;I3L456 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 2 AQS(0.924)T(0.076)DS(0.9)LGT(0.052)S(0.046)GS(0.002)LQSK 74.732 0.015862 402860000.0 586440.0 472190.0 444560.0 479440.0 408750.0 390190.0 444940.0 428690.0 501470.0 437550.0 True False 553909.0041608436 449505.28362835996 473217.0489211491 525005.833451108 440916.2995306363 387754.67947636876 489918.8773959349 427202.9744469983 410415.6890299685 433673.6474087494 1.2772484735249985 1.0365058755914878 1.0911823942927503 1.210601189599781 1.0167006968607906 0.8941163056442285 1.1296948300254288 0.9850793955306851 0.9463699062238393 1.0 18.726250253566324 -1.0000000000000038 0.3000230567508093 0.9787647826352505 3.0491598846903347 0.43725606419795926 0.0847918719068888 56.66664001532647 0.8079781469460731 0.08919343901236867 62.972507588721946 0.09999999999999913 1.0000000000000038 2.0703951020550844 AQS(ph)TDSLGTSGSLQSK ddPTM_KYSE-520_SHP099_60min_R1 6 AQSTDSLGTSGSLQSK 16 0 Q15276-2;Q15276;I3L456 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 1 AQS(0.832)T(0.131)DS(0.026)LGT(0.009)S(0.002)GSLQSK;AQS(0.97)T(0.03)DSLGTSGSLQSK;AQS(0.732)T(0.055)DS(0.213)LGTSGSLQSK;AQS(0.79)T(0.207)DS(0.003)LGTSGSLQSK;AQS(0.998)T(0.002)DSLGTSGSLQSK;AQS(0.986)T(0.003)DS(0.011)LGTSGSLQSK 334.96 1.6293999999999996e-58 5068370000.0 7657490.0 8208810.0 5504930.0 4637210.0 5175640.0 7539110.0 5829680.0 7446080.0 8654490.0 7510420.0 True False 7232713.764872126 7814446.445924995 5859786.595999419 5077929.044171972 5582933.422636676 7492055.61799914 6419000.94659399 7420251.286408134 7083052.777938812 7443883.521818348 0.9716317757623055 1.0497808600874141 0.7871948263059366 0.6821612709667394 0.7500027917246225 1.0064713661947553 0.8623188323379345 0.9968252814084279 0.9515265462144961 1.0 22.82762405032444 -6.277429371916127 24.868844232070355 0.9569106363112825 0.8467473008657321 0.22805347452760216 0.10568635860049613 1457.2529568074503 2266422.747407686 0.0421775496551893 0.03731937980153077 5.279230544347497e-07 6.277429371916127 -0.11016333544555035 AQS(ph)YDIQAWK ddPTM_KYSE-520_SHP099_60min_R1 8 AQSYDIQAWK 10 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 AQS(1)YDIQAWK;AQS(1)YDIQAWK;AQS(1)YDIQAWK;AQS(1)YDIQAWK;AQS(1)YDIQAWK;AQS(1)YDIQAWK;AQS(1)YDIQAWK;AQS(1)YDIQAWK 240.4 1.2712999999999998e-13 11488440000.0 11973780.0 11670410.0 11537650.0 11585850.0 12650020.0 14524580.0 16181580.0 18631530.0 18706630.0 16561040.0 True False 11309570.554261345 11109745.985957462 12281385.379892707 12686965.70058717 13645504.6052319 14433926.708600622 17817372.023402054 18566901.571061805 15309977.54776694 16414322.069894152 0.6890062535695253 0.6768324600096691 0.7482115513267679 0.7729204804538713 0.8313169771573693 0.87934954895726 1.085477179473727 1.131140323188598 0.9327206742121436 1.0 23.968451830412487 -6.230616014416147 1.2129047469913674 1.049140391261063 0.7075459555771548 0.8437576380353666 0.0600962355045313 0.16891953506689997 0.5109540618110431 0.03060419865661684 0.028340497542140734 5.880090165100458e-07 6.230616014416147 -0.34159443568390824 AQS(ph)YDIQAWKK ddPTM_KYSE-520_SHP099_60min_R1 2 AQSYDIQAWKK 11 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 AQS(1)YDIQAWKK;AQS(1)YDIQAWKK 118.13 0.0001595 1585750000.0 1156150.0 1376990.0 1516950.0 1029490.0 1273310.0 1412840.0 1252980.0 1335140.0 2314300.0 1466150.0 True False 1092016.054772114 1310837.3334958719 1614735.0242058164 1127332.4200725441 1373512.2528571358 1404021.9414936113 1379643.446306375 1330508.7109640196 1894081.4587553744 1453161.0516474403 0.7514762754851582 0.9020592259954828 1.1111879322496296 0.7757794077913758 0.9451892832525294 0.9661846771229381 0.9494084944970699 0.9155961821682667 1.303421569555601 1.0 20.470763172871116 -7.735325872943576 24.97806517747707 1.1517107401795141 0.9200150415739791 0.39788804092561925 0.11651607185962562 183.3560327871006 175384.39657566155 0.0753838985316318 0.02847238421005151 1.8393912959335782e-08 7.735325872943576 -0.23169569860553507 AQS(ph)YPDNHQEFSDYDNPIFEK ddPTM_KYSE-520_SHP099_60min_R1 5 AQSYPDNHQEFSDYDNPIFEK 21 0 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 AQS(1)YPDNHQEFSDYDNPIFEK;AQS(1)YPDNHQEFSDYDNPIFEK;AQS(1)YPDNHQEFSDYDNPIFEK;AQS(1)YPDNHQEFSDYDNPIFEK;AQS(1)YPDNHQEFSDYDNPIFEK 363.23 1.9377999999999996e-78 5449760000.0 2886260.0 2680770.0 2456900.0 2596610.0 2487120.0 2494040.0 2464250.0 2539520.0 2949750.0 2522590.0 True False 2726153.404183336 2551981.7852821937 2615275.7051789886 2843391.0337007344 2682842.194222961 2478473.771242838 2713360.4387623747 2530710.9978484255 2414149.75714629 2500241.8151453244 1.0903558958455708 1.0206939864070155 1.04600910573403 1.1372464121177275 1.0730330874283946 0.9912936245723811 1.0852392045945616 1.0121864943296814 0.9655665074163915 1.0 21.253636203667483 -7.464921883636344 4.48260554728951 0.9836698982729652 1.061317180039375 0.4281069006220444 0.03839614917878812 0.2118827303581113 8.685743297023725 0.024563389995787152 0.01053787112426283 3.428294455874861e-08 7.464921883636344 0.07764728176640978 AQSGSDS(ph)SPEPK ddPTM_KYSE-520_SHP099_60min_R1 2 AQSGSDSSPEPK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQSGS(0.003)DS(0.499)S(0.499)PEPK;AQS(0.004)GS(0.012)DS(0.492)S(0.492)PEPK 128.73 0.0079904 178120000.0 969080.0 852830.0 751850.0 703620.0 722600.0 949200.0 825060.0 827830.0 1054620.0 954870.0 True False 915323.2005869134 811858.7666760711 800315.4540025328 770491.8332489335 779464.5089684105 943275.6907121366 908465.1166096327 824958.4509469749 863127.5928067201 946410.5946776185 0.9671523181740219 0.8578293303580561 0.8456323909551636 0.8141200421698479 0.8236007852743071 0.9966875857232455 0.9599059031234627 0.8716707690999439 0.9120011944717635 1.0 19.852106698582926 -6.252160790630635 24.9734668125156 0.9407733152669644 0.8579214647268197 0.39739518012904496 0.05270877143699642 762.3350726867174 2051838.1665968772 0.01844104313534801 0.018202641643996757 5.595503984973324e-07 6.252160790630635 -0.08285185054014466 AQSLVIS(ph)PPAPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 AQSLVISPPAPSPR 14 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 AQSLVIS(1)PPAPS(1)PR;AQSLVIS(1)PPAPS(1)PR;AQSLVIS(1)PPAPS(1)PR;AQS(0.005)LVIS(0.995)PPAPS(1)PR;AQS(0.039)LVIS(0.961)PPAPS(1)PR 135.18 7.955e-06 2177410000.0 2706190.0 2647700.0 2772700.0 2437750.0 2474910.0 2278500.0 2251380.0 2543000.0 3038620.0 2731870.0 True False 2556072.2460439815 2520500.517721278 2951432.678476855 2669433.027063734 2669671.336688356 2264279.03633334 2478971.461751382 2534178.9265406597 2486883.2053766795 2707667.757162699 0.9440125138257099 0.9308751086811519 1.090027633807477 0.9858790909638668 0.985967103839151 0.8362469990432004 0.9155375341725963 0.9359268395603181 0.918459511436745 1.0 21.368619294019876 -6.048220516926093 24.979826540625645 0.9162328072884202 0.9903207990248426 0.2679554269158976 0.054265456480373196 498.3781614433262 258175.18567971975 0.018126575927641886 0.018126958023160583 8.94910251445021e-07 6.048220516926093 0.07408799173642244 AQSNPY(ph)YNGPHLNLK ddPTM_KYSE-520_SHP099_60min_R1 2 AQSNPYYNGPHLNLK 15 0 E9PMS6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 AQS(0.001)NPY(0.977)Y(0.022)NGPHLNLK;AQSNPY(0.996)Y(0.004)NGPHLNLK 185.27 9.5845e-09 1163760000.0 1333900.0 1317620.0 1210410.0 1437210.0 1360920.0 1292240.0 1274180.0 1293860.0 1408870.0 1306380.0 True False 1259905.9079362727 1254319.5574120588 1288434.9653244766 1573802.0062870556 1468016.6614244224 1284174.6508279121 1402986.5491984354 1289371.9016491957 1153054.7227225003 1294806.4895482594 0.97304571617944 0.9687312872904075 0.9950791687598 1.2154727513268286 1.1337730180334467 0.9917888589482923 1.0835492102668705 0.9958027798416736 0.8905228171390966 1.0 20.3043050707652 -10.076374731867501 6.673752777571611 0.9999999772705893 1.0331615852301437 0.0050225852703573715 0.08863835901133975 3.222025276060358e-08 4.328829008133602e-09 0.09232107257559843 0.022391133693060315 8.387359691858806e-11 10.076374731867501 0.03316160795955436 AQSTDS(ph)LGTSGSLQSK ddPTM_KYSE-520_SHP099_60min_R1 1 AQSTDSLGTSGSLQSK 16 0 Q15276-2;Q15276;I3L456 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 1 AQS(0.077)T(0.009)DS(0.914)LGTSGSLQSK 363.37 9.7431e-72 1199500000.0 1157300.0 1334300.0 763840.0 712220.0 754270.0 1156700.0 914600.0 1087200.0 1271500.0 1073600.0 True False 1093102.2619796458 1270198.225174869 813078.3485872125 779909.1746632484 813626.7577907592 1149480.6062439205 1007056.6936358206 1083428.7569543875 1040627.651906605 1064088.739248161 1.027266074399006 1.1936957683363287 0.7641076524893012 0.732936216592517 0.7646230316896622 1.0802488212177621 0.9464029234510679 1.0181751925313027 0.9779519447239592 1.0 20.021187038147172 -6.281005314143094 24.973746693407847 1.002057164251457 0.8965903074746032 0.14127542947685878 0.13309918104632615 2007.8656852249285 2562809.844393177 0.052838141411172324 0.04666371891508697 5.235940297103775e-07 6.281005314143094 -0.10546685677685386 AQT(ph)APTKT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 AQTAPTKTSPR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 2 AQT(0.919)APT(0.355)KT(0.52)S(0.206)PR 79.81 0.015590000000000001 264270000.0 483350.0 605260.0 613330.0 639680.0 682110.0 527380.0 596620.0 653160.0 712750.0 670860.0 True False 456537.61196566356 576182.4010862181 652866.2331626968 700474.9948731957 735788.1763249949 524088.4257983213 656932.172050079 650894.3404086897 583332.5669653425 664916.7023211826 0.6866087291414388 0.8665482444264092 0.9818767236310679 1.0534778152329176 1.1065869961702035 0.7882016258108142 0.9879916834045075 0.9789110998963604 0.8773017205447916 1.0 19.34281409223079 -4.378746455920782 2.4136086366973943 0.9725093871765302 0.6573246991359611 0.5258328907764775 0.08316083380254935 0.34227452558584504 2.913314741084119 0.022639927559240436 0.20043164885924383 4.180743700816178e-05 4.378746455920782 -0.3151846880405691 AQT(ph)APTKTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 AQTAPTKTSPR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 2 AQT(1)APTKT(0.018)S(0.981)PR;AQT(0.979)APT(0.052)KT(0.024)S(0.945)PR 139.21 0.00016694 1033770000.0 1471140.0 2071100.0 1898870.0 2140030.0 2332200.0 1825900.0 2125060.0 2311670.0 2636900.0 2580800.0 True False 1389532.931555118 1971601.2472155215 2021274.1984994223 2343417.8077765172 2515730.871597185 1814503.8808167865 2339881.8033869825 2303651.3563178345 2158105.430839584 2557936.119832015 0.543224250512703 0.7707781409900888 0.7901972933679686 0.9161361730684714 0.9835002727755366 0.7093624687296525 0.9147538068857823 0.9005898694878745 0.8436901195880182 1.0 21.28654880510263 -3.968782206881703 1.0877168109262787 0.8864963746529496 0.17740267248671254 0.6444377707489126 0.07856537336268517 1.8933078222340018 1.2137415442337123 0.02417095539010897 1.791435366785807 0.00010745281393421495 3.968782206881703 -0.7090937021662371 AQT(ph)NDSDS(ph)DTESKR ddPTM_KYSE-520_SHP099_60min_R1 1 AQTNDSDSDTESKR 14 1 O14647;O14647-2;A0A1B0GTM9;A0A1B0GTU9 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 2 AQT(0.765)NDS(0.236)DS(0.999)DTESKR 105.89 0.0015279000000000002 155120000.0 417100.0 331500.0 316890.0 319480.0 336890.0 313650.0 341520.0 367280.0 400140.0 321750.0 True False 393962.63153176394 315574.2424083552 337317.23644192703 349843.2831448355 363401.3263581061 311692.39400743996 376044.17451400065 366005.9914037964 327484.66270854074 318899.545317712 1.235381603129187 0.9895725692990753 1.057753895841607 1.0970328690694588 1.139547960145437 0.977399932310685 1.1791931974671108 1.1477156263711614 1.0269210712805363 1.0 18.28274251505505 -7.935154882998986 6.633884996186127 1.000254625854956 1.0968593757594998 0.18225025509373227 0.07596357073165431 0.31847356885900285 23.57118045088091 0.0709157016466778 0.018380377479887248 1.1610344787803141e-08 7.935154882998986 0.09660474990454371 AQT(ph)PHEDGGPQPHR ddPTM_KYSE-520_SHP099_60min_R1 2 AQTPHEDGGPQPHR 14 0 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 AQT(1)PHEDGGPQPHR;AQT(1)PHEDGGPQPHR 159.26 2.0869e-05 405680000.0 306570.0 257870.0 219430.0 269150.0 266480.0 244320.0 243210.0 274860.0 274080.0 240570.0 True False 289563.95096785645 245481.5381292388 233574.80890041366 294729.9350771015 287450.4599362049 242795.1082540978 267796.0403008614 273906.57481280644 224313.98099454388 238438.73696062778 1.214416561079464 1.0295371518000196 0.9796009317856046 1.2360824370822296 1.2055526866159763 1.0182704008123873 1.1231230449986878 1.1487503176047913 0.9407614880613285 1.0 17.863259110745016 -7.762364910165871 24.99998019312456 0.9703806951617102 1.115272246880271 0.3337222187474189 0.08407072143658939 30.120227859097795 813380.279326509 0.06947810110793767 0.021902909386942802 1.728363514463835e-08 7.762364910165871 0.14489155171856072 AQT(ph)PPGPS(ph)LSGSKSPCPQEK ddPTM_KYSE-520_SHP099_60min_R1 1 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AQT(1)PPGPS(0.489)LS(0.372)GS(0.036)KS(0.103)PCPQEK 101.47 0.0006358 2215800000.0 1757900.0 1589200.0 1543700.0 1623500.0 1700900.0 1445100.0 1592200.0 1673200.0 1982700.0 1520100.0 True False 1660385.782713228 1512852.4465621698 1643209.3720073302 1777796.9518769248 1834751.1532028348 1436080.5948673713 1753155.1143745384 1667396.0597278154 1622691.6597996282 1506633.0966199029 1.1020505167703176 1.0041279791053441 1.0906499901627231 1.1799800202619815 1.2177823235922915 0.9531720749326332 1.1636244539614204 1.1067034591690443 1.0770317361540112 1.0 20.522896696190685 -9.550783165967417 14.035482371948587 0.9999913390842521 1.1000414106744323 0.13769813958923338 0.07465384034393409 0.0 0.0 0.07317734794977201 0.017748113823499178 2.8133051034351316e-10 9.550783165967417 0.1000500715901802 AQT(ph)PPGPSLSGS(ph)KSPCPQEK ddPTM_KYSE-520_SHP099_60min_R1 4 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AQT(1)PPGPS(0.131)LS(0.086)GS(0.475)KS(0.308)PCPQEK;AQT(1)PPGPS(0.026)LS(0.016)GS(0.603)KS(0.356)PCPQEK;AQT(1)PPGPS(0.076)LS(0.13)GS(0.508)KS(0.285)PCPQEK;AQT(1)PPGPS(0.041)LS(0.152)GS(0.754)KS(0.053)PCPQEK 112.99 7.7389e-05 54670000000.0 27072600.0 24525500.0 22521500.0 23898600.0 24711100.0 22554900.0 22596100.0 24731500.0 29235500.0 22596500.0 True False 25570828.910109885 23347258.166474003 23973271.925674077 26169915.75862391 26655722.983073965 22414126.50278467 24880334.30468442 24645712.198875464 23927070.16698038 22396312.589810964 1.1417428117940782 1.0424599171336653 1.0704115612576572 1.168492163773858 1.1901835570557624 1.000795394907187 1.1109120845189284 1.1004361588562506 1.0683486431541334 1.0 24.416757885498626 -8.623995118865752 0.6104903694208994 0.9962940809144198 1.10643402753623 0.26102103167580826 0.05339973590375381 3.3176312752846164 1.9592190708096877 0.08252445867168152 0.02343313297717693 2.37686700062242e-09 8.623995118865752 0.11013994662181026 AQT(ph)PPGPSLSGSK ddPTM_KYSE-520_SHP099_60min_R1 5 AQTPPGPSLSGSK 13 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQT(0.738)PPGPS(0.216)LS(0.004)GS(0.041)K;AQT(0.889)PPGPS(0.11)LS(0.001)GSK;AQT(0.998)PPGPS(0.002)LSGSK;AQT(1)PPGPSLSGSK;AQT(1)PPGPSLSGSK 170.22 3.0735000000000003e-06 11411700000.0 8122850.0 9814500.0 7013520.0 6793770.0 6442760.0 10189600.0 7734090.0 10175600.0 9838200.0 9572800.0 True False 7672259.317999981 9342996.68813517 7465622.721228775 7439447.858178575 6949768.557710095 10126002.926759783 8515927.29464449 10140303.218602903 8051830.880839608 9487992.439525701 0.8086283127754592 0.9847179735529195 0.7868495647327873 0.7840908290764266 0.7324804063669248 1.0672439919509438 0.8975478584034575 1.0687511908588547 0.848633779185654 1.0 23.177671429601943 -6.261635602046064 24.999999870672568 0.9758018431993094 0.8247755358487486 0.4431186493312833 0.08794120146746268 18.120200051590242 2308521.5666540465 0.029776462454309535 0.027928083228487745 5.474751332371972e-07 6.261635602046064 -0.15102630735056077 AQT(ph)PPGPSLSGSKS(ph)PCPQEK ddPTM_KYSE-520_SHP099_60min_R1 3 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 AQT(1)PPGPS(0.005)LS(0.009)GS(0.025)KS(0.961)PCPQEK;AQT(0.999)PPGPS(0.013)LS(0.034)GS(0.09)KS(0.864)PCPQEK;AQT(1)PPGPS(0.029)LS(0.019)GS(0.016)KS(0.937)PCPQEK 85.185 0.0017422999999999998 19945200000.0 9045300.0 8257000.0 7950900.0 8338800.0 8277500.0 7601700.0 7959200.0 8429100.0 10023700.0 7813000.0 True False 8543539.177641492 7860321.325990329 8463427.735889789 9131317.044848371 8928892.157467494 7554254.970592551 8763793.610306384 8399861.419466728 8203648.756914083 7743782.898422017 1.103277208272774 1.0150492891003 1.0929319490109177 1.1791804037674014 1.1530400935293488 0.9755251496180134 1.131719952026576 1.0847232585999285 1.0593851693060474 1.0 22.884607075686628 -6.218794833986773 24.999172589935466 1.0606562577652061 1.1065332286326799 0.19665130198126846 0.057063819437747326 1091.7562726785177 640011.53301521 0.01991734765499003 0.01991728003474518 6.042340094824873e-07 6.218794833986773 0.045876970867473776 AQTAPTKT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 AQTAPTKTSPR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 AQTAPTKT(0.897)S(0.103)PR;AQT(0.001)APT(0.03)KT(0.485)S(0.485)PR 135.14 0.0015558 5856430000.0 3350800.0 3219700.0 3091170.0 2631840.0 2785480.0 2667440.0 2604590.0 2683620.0 3504000.0 2535110.0 True False 3164924.4443458067 3065020.779131773 3290431.7642468736 2881969.282308448 3004681.4287867756 2650791.5175233725 2867887.375548786 2674311.1485816194 2867761.9286517836 2512650.8976857373 1.2595957708493617 1.2198355059808716 1.3095459330532175 1.1469835642360302 1.1958212864167561 1.05497803931492 1.1413791618207834 1.0643385243229684 1.1413292357060503 1.0 21.260778809518538 -5.8011682625356995 1.1632106706841676 1.0848297495040005 1.2596799027652115 0.6741561308638825 0.05211566080084552 0.27651286943104647 0.7931682312155451 0.02076184431444143 0.029328821279369272 1.5806355210817285e-06 5.8011682625356995 0.174850153261211 AQTAPTKTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 AQTAPTKTSPR 11 1 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 AQTAPT(0.003)KT(0.21)S(0.788)PR;AQTAPT(0.002)KT(0.046)S(0.952)PR;AQTAPTKT(0.005)S(0.995)PR;AQTAPTKT(0.297)S(0.703)PR;AQTAPTKT(0.005)S(0.995)PR;AQTAPT(0.001)KT(0.262)S(0.736)PR 177.31 9.9372e-06 19734050000.0 13271990.0 12359960.0 12891740.0 10301470.0 11224770.0 10915050.0 10293550.0 10785780.0 14633200.0 10520320.0 True False 12535766.25764386 11766168.968921816 13722762.187913312 11280518.611550119 12108095.53879509 10846925.124217788 11334122.489366919 10748366.646599973 11976179.752953002 10427118.149485096 1.202227315153506 1.128420029411755 1.3160647065834732 1.0818443264793316 1.1612120784680091 1.0402610739337812 1.086985140753067 1.0308089438049324 1.1485608565339216 1.0 23.313837144606385 -5.761421452349307 1.5280036425746686 1.0668281625637859 1.202069165580395 0.45039252671592844 0.06591211297853786 0.35697248348272476 1.7328614806428313 0.023187781878950604 0.03167050926598772 1.7321222786465437e-06 5.761421452349307 0.13524100301660913 AQTLPT(ph)SVVTITSESSPGK ddPTM_KYSE-520_SHP099_60min_R1 1 AQTLPTSVVTITSESSPGK 19 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQT(0.211)LPT(0.775)S(0.014)VVTITSESSPGK 159.01 6.7477e-08 114020000.0 122940.0 120270.0 93144.0 88251.0 89774.0 97184.0 80291.0 108470.0 103790.0 123260.0 True False 116120.27312518585 114492.04867104965 99148.21127566924 96638.34850636931 96838.70305581237 96577.43860742557 88407.59784464643 108093.74288708832 84944.3523329819 122168.01229482905 0.9504965411482005 0.9371687933724014 0.811572599187372 0.7910282461922291 0.7926682380827376 0.7905296713378168 0.7236558587144044 0.8847957894757656 0.695307640170039 1.0 16.898507062828237 -4.76144013431523 4.645921716311448 0.8010263929604857 0.9476165452815511 0.3004412123826603 0.08003742063957035 0.1865119308531597 10.157296892958195 0.019089995167777405 0.048073511064840924 1.7320477698633488e-05 4.76144013431523 0.14659015232106543 AQTLPTSVVTITSES(ph)SPGKR ddPTM_KYSE-520_SHP099_60min_R1 2 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQTLPTSVVTITS(0.002)ES(0.499)S(0.499)PGKR;AQTLPTSVVTITSES(0.663)S(0.336)PGKR 198.1 2.1054e-13 9813900000.0 8277100.0 8487700.0 6083940.0 5399340.0 5326520.0 7049920.0 5039660.0 6632900.0 8483200.0 6988600.0 True False 7817952.763010231 8079938.151702562 6476120.507048176 5912491.650229236 5745686.8202468995 7005918.834244954 5549118.015141812 6609892.018030506 6942864.724069298 6926686.441048519 1.1286713827090458 1.166493996872691 0.9349521682791607 0.8535815357818103 0.8295000602592822 1.0114387151592272 0.8011215842335461 0.9542646508234234 1.0023356453563286 1.0 22.723733936360308 -4.788148878800868 6.490077004623802 0.9139008710522329 1.1483796732320046 0.6106902993474312 0.07133421299056489 0.09255147507086718 12.98389928856427 0.01845667698364384 0.04102417896816271 1.628737595732e-05 4.788148878800868 0.23447880217977168 AQTLPTSVVTITSESS(ph)PGKR ddPTM_KYSE-520_SHP099_60min_R1 7 AQTLPTSVVTITSESSPGKR 20 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 AQTLPTSVVTITSES(0.058)S(0.942)PGKR;AQTLPTSVVTIT(0.001)S(0.044)ES(0.056)S(0.899)PGKR;AQTLPTSVVTITSES(0.173)S(0.827)PGKR;AQTLPTSVVTITSES(0.078)S(0.922)PGKR;AQTLPTSVVTITSES(0.251)S(0.748)PGKR;AQTLPTSVVTITSES(0.261)S(0.739)PGKR;AQTLPTSVVTITSES(0.205)S(0.795)PGKR 317.8 7.777399999999998e-54 45443680000.0 11992400.0 14036050.0 9934540.0 8583500.0 9084360.0 11495790.0 8619170.0 10673090.0 12990560.0 11476730.0 True False 11327157.665743276 13361737.089459423 10574936.344226003 9399273.259276628 9799247.449062083 11424040.510463206 9490479.818592882 10636067.541907927 10631801.76936836 11375055.100960828 0.9957892568614014 1.1746525156023888 0.9296602302465118 0.8263057344208109 0.8614681302277261 1.004306388766261 0.8343238546414812 0.9350343754387194 0.9346593642847771 1.0 23.43937019797917 -4.867319264574326 7.135585225462437 0.9071590019215229 1.0839363575774192 0.47956142664271995 0.07046459742818532 0.156503305997791 9.304144126424683 0.017683827808772312 0.03732271217249796 1.3573152713354099e-05 4.867319264574326 0.17677735565589636 AQTPPGPS(ph)LSGSK ddPTM_KYSE-520_SHP099_60min_R1 1 AQTPPGPSLSGSK 13 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQT(0.45)PPGPS(0.549)LSGSK 166.79 8.141199999999999e-07 6016500000.0 1894700.0 2425400.0 1591300.0 1525500.0 1475600.0 2616000.0 1842700.0 2408400.0 2248300.0 2351200.0 True False 1789597.2140091923 2308880.143400377 1693877.744170024 1670483.0613417004 1591721.3249844816 2599672.573644068 2028978.0990189414 2400045.822524783 1840065.3950307674 2330370.197205918 0.7679454604057737 0.9907782661178438 0.7268706689610777 0.7168316275862894 0.6830336771783873 1.115562058234799 0.8706677168510215 1.0298989514208539 0.7896021830509937 1.0 21.15212772559832 -6.249343527367136 24.994275353500147 0.957359968646867 0.7828255408929646 0.3962543301900605 0.11343568226975773 859.477827131878 1775984.00734628 0.03770931013994016 0.03743317829513751 5.631919941622467e-07 6.249343527367136 -0.17453442775390238 AQTPPGPSLSGS(ph)KSPCPQEK ddPTM_KYSE-520_SHP099_60min_R1 1 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQTPPGPS(0.167)LS(0.132)GS(0.569)KS(0.132)PCPQEK 50.938 0.04972 1800700000.0 1552900.0 1718300.0 1309200.0 1097000.0 1059400.0 1541800.0 1206500.0 1520200.0 1776100.0 1556500.0 True False 1466757.5413705984 1635750.2887791167 1393593.1267940635 1201258.5501749236 1142768.7528385466 1532177.05429833 1328464.7943052875 1514926.781017349 1453605.0118374536 1542710.620938675 0.9507664765269702 1.0603092158552918 0.90334059277178 0.77866745316371 0.7407537987540525 0.9931720398515597 0.8611237754342886 0.9819902452577784 0.9422408792084387 1.0 20.55703603830353 -8.964162939624048 11.194555070311692 1.0000118383421437 0.9104838397513413 0.07408313828326596 0.09257463844187701 0.0 0.0 0.09722788655891683 0.023581226237528577 1.0860180923532076e-09 8.964162939624048 -0.0895279985908024 AQTPPGPSLSGSKS(ph)PCPQEK ddPTM_KYSE-520_SHP099_60min_R1 5 AQTPPGPSLSGSKSPCPQEK 20 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 AQTPPGPS(0.034)LS(0.034)GS(0.034)KS(0.899)PCPQEK;AQTPPGPSLSGS(0.003)KS(0.997)PCPQEK;AQTPPGPSLS(0.005)GS(0.136)KS(0.859)PCPQEK;AQTPPGPSLSGS(0.001)KS(0.999)PCPQEK;AQTPPGPSLSGS(0.002)KS(0.998)PCPQEK 193.81 3.0607e-13 29757900000.0 15671900.0 16314900.0 12244120.0 9635680.0 10412250.0 14183200.0 11483710.0 13783700.0 17261100.0 15625700.0 True False 14802548.465841897 15531107.714835823 13033395.566484664 10551452.130127177 11231634.837401511 14094677.387809094 12644595.477009187 13735887.561839778 14126919.356921049 15487268.454610655 0.9557882017235316 1.0028306644489084 0.841555475368837 0.6812984588632184 0.7252172886599498 0.910081556932851 0.816450978044796 0.8869147972798599 0.9121633939725102 1.0 23.884579377448627 -9.116315285861587 10.764745512618683 0.999955871539771 0.8547426960435743 0.16725713721756597 0.09382681160007555 0.0 0.0 0.101143903616415 0.024530999882221835 7.650410065091804e-10 9.116315285861587 -0.1452131754961966 AQTSYGFAMLAES(ph)PHTR ddPTM_KYSE-520_SHP099_60min_R1 4 AQTSYGFAMLAESPHTR 17 0 Q8TF44 Q8TF44 C2CD4C C2 calcium-dependent domain-containing protein 4C 1 AQTSYGFAMLAES(1)PHTR;AQTSYGFAMLAES(0.984)PHT(0.016)R;AQTSYGFAMLAES(0.998)PHT(0.002)R;AQTSYGFAMLAES(1)PHTR 224.1 1.6244000000000002e-18 1547910000.0 903575.0 1036860.0 901160.0 833311.0 772532.0 913930.0 727093.0 856560.0 1070230.0 808183.0 True False 853451.8935178937 987047.6892414114 959250.2155069791 912508.6268959113 833325.8732941926 908225.8238648789 800594.6561838507 853588.7932826079 875903.2103027982 801023.1273768604 1.0654522501899837 1.2322336965147715 1.197531235643933 1.1391788772493205 1.0403268580061042 1.1338322113608368 0.9994650951035424 1.0656231563224476 1.0934805505193719 1.0 19.611484371590432 -5.627990541889119 4.2813163054063885 1.0600133614835157 1.1714873578688791 0.4608923723455798 0.05477622463724384 0.1898443729187563 6.215585513413899 0.016076801483035412 0.02106980789607471 2.3551005729653703e-06 5.627990541889119 0.11147399638536348 AQTVGLPVTMHS(ph)PNMR ddPTM_KYSE-520_SHP099_60min_R1 1 AQTVGLPVTMHSPNMR 16 0 Q9H0K1 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 1 AQTVGLPVTMHS(1)PNMR 201.61 8.624200000000001e-13 593910000.0 278570.0 313140.0 304650.0 263570.0 274330.0 294610.0 219750.0 281170.0 349030.0 339390.0 True False 263117.1667844729 298096.2843672774 324288.2264572346 288619.61355479027 295918.2102758149 292771.2297099692 241964.47455332545 280194.68689557153 285654.9503302891 336383.2686414247 0.7821945718261883 0.8861804737531099 0.9640438651035195 0.8580082318614093 0.8797054962660927 0.8703501541334246 0.7193118597442874 0.832962614422572 0.8491948826229803 1.0 18.359746423643603 -6.550586488990178 24.999334563252066 0.8305023597067948 0.8784344024590317 0.0 0.07649717083321098 592.5552789074746 534628.5016470553 0.028485239482326338 0.022065110402193323 2.8145794407196216e-07 6.550586488990178 0.04793204275223695 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(ph)SPER ddPTM_KYSE-520_SHP099_60min_R1 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 33 0 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.575)S(0.425)PER 115.24 0.00036486 818070000.0 158570.0 198780.0 187560.0 181720.0 159080.0 128990.0 212960.0 159700.0 233270.0 220270.0 True False 149773.805998542 189230.31042513714 199650.41770661037 198990.61416388993 171598.69095861423 128184.92556358904 234488.07508931143 159146.03797426028 190914.04825816274 218318.57916746664 0.6860332573145518 0.866762284486944 0.9144911920366777 0.911468986848111 0.7860013179500643 0.5871462064859887 1.074063764904963 0.7289624116332463 0.8744745819901907 1.0 17.73607538503215 -8.017232827841656 23.593947732351893 1.0000000089825491 0.8252549655319195 0.15239402430964744 0.12880846545274327 1033.25704413405 1414663.157445684 0.12143607709929917 0.031354660302630045 9.610968905145349e-09 8.017232827841656 -0.1747450434506297 AQVLATIHGHAGAFPAAGDAGEGAPGGGSS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 2 AQVLATIHGHAGAFPAAGDAGEGAPGGGSSPER 33 0 Q86WR7;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.444)S(0.556)PER;AQVLATIHGHAGAFPAAGDAGEGAPGGGS(0.188)S(0.812)PER 160.77 9.303899999999999e-10 9174200000.0 1277330.0 1408040.0 1536290.0 1636740.0 1344560.0 954190.0 1188690.0 1133510.0 1479990.0 1302320.0 True False 1206473.958605775 1340395.6448888725 1635321.7115509112 1792295.2774961754 1450369.222500089 948234.5462711917 1308854.3856964381 1129578.1183732229 1211261.1235118024 1290782.457989628 0.9346841918543253 1.0384365208809208 1.2669227889089052 1.3885339596942192 1.1236356781289194 0.7346199511791097 1.0140007540348486 0.8751111478014055 0.9383929228464425 1.0 20.299814445859948 -6.086542537260987 8.199173494169235 0.9119030570446105 1.1687021035724077 0.43899240530685246 0.13468968017395955 0.3173884156457876 27.396031791033476 0.04736915013448992 0.0474512458997429 8.193273696876253e-07 6.086542537260987 0.25679904652779717 AQVLVEDISDILEEHAEK ddPTM_KYSE-520_SHP099_60min_R1 2 AQVLVEDISDILEEHAEK 18 0 Q5VV41;Q5VV41-2;B0QZD3;B0QZD4 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 0 ; 211.16 6.615e-18 108299000.0 113371.0 89917.0 51953.0 118167.0 101199.0 80000.0 75146.0 93468.0 87304.0 54355.0 False True 107082.08463051466 85597.2523518314 55301.973507739065 129397.55615179587 109162.78555645453 79500.69032550682 82742.49103428535 93143.78132359518 71451.7943547419 53873.456987550075 1.9876594267054528 1.588857614457757 1.0265161472841646 2.401879578318115 2.026281431720292 1.4756931292506268 1.5358674876462224 1.728936410097468 1.3262893890632284 1.0 15.71728702350453 -8.089448179894632 0.8701210449632775 0.9942889871928603 1.7438492879075749 0.30772615375830004 0.3504576625991005 0.973402275003369 1.6316410715317908 0.3530377010377037 0.12418090306729591 8.138639653982652e-09 8.089448179894632 0.7495603007147146 AQYDELAR ddPTM_KYSE-520_SHP099_60min_R1 3 AQYDELAR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;; 182.73 0.006910899999999999 1318910000.0 1769260.0 2265040.0 1426930.0 1181600.0 1974010.0 2244790.0 1539220.0 1789260.0 1729900.0 1890350.0 False True 1671115.620867629 2156224.0785056474 1518912.1909687244 1293898.9087390066 2129353.3564195 2230779.432947429 1694819.3789395648 1783053.4746764216 1415793.767230229 1873602.9696700461 0.891926223388685 1.1508436490604905 0.8106905334571577 0.6905939677107102 1.1365019114986208 1.1906361534750791 0.9045776540576437 0.9516709268401881 0.7556530332995574 1.0 20.837383836956583 -7.37830449869257 2.912877845771145 0.8773733433936235 0.97409053856614 0.03975175877799675 0.1596420537474305 0.972733689991567 15.557552246615199 0.11447494183946991 0.0463543099066748 4.185000375605902e-08 7.37830449869257 0.09671719517251653 ARAEEAEAQKR ddPTM_KYSE-520_SHP099_60min_R1 6 ARAEEAEAQKR 11 2 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;;;; 67.207 0.020742 4667280000.0 2726700.0 3127780.0 2097093.0 1801596.0 2885600.0 2505231.0 2108320.0 2190347.0 2396680.0 3313263.0 False True 2575444.5154583086 2977516.753906505 2232274.9702474372 1972819.1421704139 3112680.3031819044 2489594.9240607466 2321449.560820328 2182749.1974878334 1961503.327386176 3283910.0674996115 0.784261585281252 0.906698628374316 0.6797612980757127 0.6007530966499731 0.9478579617595672 0.7581190936682194 0.7069163019399899 0.6646799554866591 0.5973072608774808 1.0 21.64698318762476 -6.622573680996537 5.650181687872999 0.715128830327776 0.7819145040410989 0.0045406381982762145 0.13569049141254577 0.7594732407917917 36.07946455912302 0.052293995731583005 0.04016206070824701 2.384659187582206e-07 6.622573680996537 0.06678567371332289 ARDDLITDLLNEAK ddPTM_KYSE-520_SHP099_60min_R1 5 ARDDLITDLLNEAK 14 1 C9J8H1;P36543-2;P36543 C9J8H1 ATP6V1E1 V-type proton ATPase subunit E 1 0 ;;;; 196.95 6.357899999999999e-11 145423000.0 325284.0 340236.0 245211.0 238404.0 342380.0 330988.0 248087.0 290811.0 316319.0 276465.0 False True 307239.8480824222 323890.5518553523 261017.6934114723 261061.84448122384 369323.3581242792 328922.1811182356 273166.05505579454 289802.24451679736 258883.44335308357 274015.73518651497 1.1212489234360665 1.1820144256857692 0.9525646154364265 0.9527257414743946 1.3478180655314955 1.2003769816151153 0.996899155699427 1.0576116890496707 0.9447758289386875 1.0 18.063899215884447 -6.785051984055232 24.858490479082683 1.0046225667719322 1.1229713260715395 0.2344355857155872 0.1115926809052325 400.21385962706313 421326.3837043758 0.050908405902883196 0.03434574806192853 1.6403934101119105e-07 6.785051984055232 0.11834875929960731 ARDQLHR ddPTM_KYSE-520_SHP099_60min_R1 1 ARDQLHR 7 1 Q6V0L0 Q6V0L0 CYP26C1 Cytochrome P450 26C1 0 66.682 0.035835000000000006 181010000.0 23298.0 45385.0 13969.0 11078.0 53756.0 84901.0 18563.0 24017.0 17291.0 93890.0 False True 22005.61349658843 43204.63647572615 14869.464091190252 12130.849789277849 57986.29137019906 84371.10136657309 20439.529197421532 23933.690632609945 14151.39027063872 93058.20764531461 0.23647149513626367 0.46427539890299463 0.15978670197328815 0.13035765566766344 0.6231185065503313 0.9066486825981876 0.21964241214837799 0.2571905395366271 0.15207030770005625 1.0 16.505845779774653 -5.760910702215874 24.99999908634222 0.49297464689088977 0.25690970738765484 0.1908552628603768 0.2757762584435695 30.428970771480078 1438867.8923141183 0.08725337639559902 0.10589076449145272 1.7341605318107877e-06 5.760910702215874 -0.23606493950323493 AREEEEQKEGGDGAAGDPK ddPTM_KYSE-520_SHP099_60min_R1 1 AREEEEQKEGGDGAAGDPK 19 2 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 0 65.78399999999999 0.011569 893540000.0 1461800.0 1068600.0 958970.0 425970.0 1037400.0 1234800.0 884340.0 1088800.0 1124900.0 1233800.0 False True 1380711.0399739447 1017262.8519987002 1020786.7406062514 466454.0607274498 1119037.4780014232 1227093.155174196 973737.7175266781 1085023.2069278318 920646.5164213459 1222869.4918818758 1.1290747288569332 0.8318654269747402 0.8347470824833164 0.3814422257027795 0.9150915003033845 1.0034538953832435 0.7962728026096976 0.8872763726062769 0.7528575392003292 1.0 20.221839012877513 AREEFQEHR ddPTM_KYSE-520_SHP099_60min_R1 1 AREEFQEHR 9 1 Q96FX7;H0Y2Q1 Q96FX7 TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 0 73.887 0.020431 34540000.0 20745.0 22143.0 15003.0 13633.0 19644.0 17217.0 16869.0 14448.0 17535.0 13548.0 False True 19594.23349586776 21079.217042679396 15970.117385648751 14928.67622108909 21189.871040929185 17109.54231667811 18574.283145574725 14397.883260188544 14351.086021378165 13427.975260184505 1.459209829941147 1.5697986207333658 1.189316860971735 1.1117592884873966 1.5780391779361997 1.27417142087012 1.3832527082954655 1.0722303981956185 1.0687453427122993 1.0 13.71295416366642 -7.2854102663478715 5.950168489966439 1.0494519513269311 1.3626165365306906 0.5134942696056626 0.14251424170132582 0.16429336832999428 20.76628139224168 0.08083647005053197 0.03975486434481867 5.1831017386570245e-08 7.2854102663478715 0.31316458520375945 AREES(ph)WGPPR ddPTM_KYSE-520_SHP099_60min_R1 2 AREESWGPPR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 AREES(1)WGPPR;AREES(1)WGPPR 87.02600000000001 0.006452500000000001 1533520000.0 1651490.0 1549390.0 1607300.0 1385440.0 1393680.0 1439060.0 1215750.0 1379810.0 1782000.0 1363430.0 True False 1559878.557536304 1474954.9787181967 1710909.1297709262 1517111.8010522767 1503354.6870455213 1430078.292747796 1338649.8745765877 1375023.7611600754 1458433.720564351 1351351.0709324894 1.1543103721077617 1.0914669107417183 1.266073018753244 1.1226629657424296 1.112482699264924 1.0582581562324744 0.99060111274627 1.0175177944035305 1.079241177170911 1.0 20.36597109409633 -6.1249317525536595 1.7751013030102123 1.023519398260173 1.1625363672080526 0.6377294612288718 0.047033573768988965 0.23429468678349133 1.4680247397482116 0.018883265396695496 0.019022073878078506 7.500120611320573e-07 6.1249317525536595 0.13901696894787974 AREESWGPPR ddPTM_KYSE-520_SHP099_60min_R1 1 AREESWGPPR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 72.289 0.022936 448590000.0 278640.0 262520.0 204960.0 212620.0 289200.0 264630.0 257100.0 277780.0 240910.0 203660.0 False True 263183.2837449311 249908.14514944653 218172.0495475951 232827.34087346576 311958.39467708877 262978.3460104859 283090.1770541975 276816.4460143395 197166.81684689005 201855.73084508226 1.303818735505289 1.2380532576567913 1.0808315851831578 1.153434385532275 1.5454522562775626 1.3028034671570126 1.402438146635827 1.371357874534596 0.9767709642002149 1.0 17.62296502109875 -7.76856773707199 24.997940706392257 0.9883852366827085 1.2972527449301623 0.5091271774444581 0.12228193495916481 159.62655510439814 559759.1129890961 0.11974756204131841 0.033522063236365286 1.7038535479177886e-08 7.76856773707199 0.3088675082474538 AREETDKEEPASK ddPTM_KYSE-520_SHP099_60min_R1 4 AREETDKEEPASK 13 2 P05455 P05455 SSB Lupus La protein 0 ;;; 240.73 4.7686e-16 7452370000.0 8785860.0 8761020.0 5801380.0 5182630.0 8050260.0 7868770.0 5945370.0 7853210.0 7582920.0 6685060.0 False True 8298490.831622297 8340127.448640875 6175346.237336196 5675185.596985473 8683769.662286226 7819658.087657973 6546386.020819591 7825969.047462997 6206052.877857359 6625835.569297976 1.252444426794241 1.2587284066158213 0.9320101853946988 0.8565237603061697 1.3105923881546448 1.1801769008412755 0.9880091276568153 1.1811293784177288 0.9366445654966512 1.0 22.659670970403546 -4.735139658252865 24.80715105659047 1.0597032390328636 1.2555867574586828 0.28075388517223565 0.13177963272303017 289.004083305246 272597.637713196 0.03479894419197216 0.09200623304560233 1.840180150359404e-05 4.735139658252865 0.1958835184258192 ARENIQK ddPTM_KYSE-520_SHP099_60min_R1 1 ARENIQK 7 1 P29692-2;P29692;E9PRY8;P29692-4;A0A087X1X7;E9PK01;E9PI39;E9PQ49;E9PL12;E9PPR1;H0YCK7;E9PK06;E9PIZ1;E9PMW7;E9PK72 P29692-2 EEF1D Elongation factor 1-delta 0 96.492 0.0065891000000000005 2956200000.0 1590300.0 1647100.0 831180.0 735220.0 1616700.0 1675300.0 923890.0 1230400.0 1270000.0 1649600.0 False True 1502082.8888155476 1567970.8436524973 884759.1927350224 805095.0877480458 1743925.0922353007 1664843.83127902 1017285.817497483 1226132.0295775195 1039400.0140946822 1634985.8273693814 0.9187130944323422 0.959011887078735 0.5411418117052184 0.4924171661129366 1.066630097363717 1.0182619343910024 0.6221985539374675 0.749934347474015 0.6357241736871995 1.0 20.640846699315098 -10.418346181134961 5.6229317413818904 1.000118903617469 0.7782851469591465 0.10518654765163227 0.19405198255544054 0.0003077512079349881 3.183473471597184e-05 0.1999059670381804 0.04845844646603819 3.8163993997037755e-11 10.418346181134961 -0.2218337566583224 ARFEEHKNEK ddPTM_KYSE-520_SHP099_60min_R1 2 ARFEEHKNEK 10 2 A0A3B3IT57;E9PH64;E7EWZ0;E9PF49;Q9Y6M9 A0A3B3IT57 NDUFB9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 0 ; 112.83 0.00090242 198411000.0 377870.0 459910.0 288970.0 280500.0 360990.0 423750.0 330260.0 310570.0 427140.0 164888.0 False True 356908.7978348301 437815.23326101655 307597.4685683477 307158.63566459954 389397.8592478634 421105.21906791837 363645.90382699104 309492.70515758306 349582.14332315157 163427.22060092285 2.183900555381621 2.6789615074598183 1.8821678997985156 1.8794827112348569 2.382698903010436 2.576714071985756 2.225124446771247 1.893764723034367 2.1390692568700365 1.0 17.31828877466012 -8.812937598202588 0.7575477589923962 0.9742291403569538 2.2528747524638275 0.664908567239448 0.2596998568575651 2.1844163720936747 1.548633088850327 0.4236893177910512 0.09712904608145119 1.538375666621138e-09 8.812937598202588 1.2786456121068737 ARFEELCSDLFR ddPTM_KYSE-520_SHP099_60min_R1 6 ARFEELCSDLFR 12 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066;P48741 A0A0G2JIW1;P17066 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ;;;;; 153.74 3.7375e-05 2786370000.0 2850780.0 2616355.0 1908260.0 1748610.0 2984780.0 2467170.0 1987990.0 2109840.0 2310150.0 2095560.0 False True 2692641.5505109597 2490661.3785710777 2031269.4929239529 1914797.368661232 3219665.204924897 2451771.476879759 2188955.430112698 2102521.4574803566 1890684.9941423866 2076994.9687210084 1.29641216808968 1.1991658218145809 0.9779847922187251 0.9219075623665781 1.5501555147760095 1.180441702460904 1.0539050229190656 1.0122901062081373 0.9102983024107423 1.0 20.986066290749854 -6.971082799666445 2.834542150648425 0.9736618688379113 1.182208997157126 0.26282475581143927 0.1626521564584821 0.43022466651667784 7.000306194801238 0.08777463629023505 0.051398057120281476 1.0688510798340623e-07 6.971082799666445 0.20854712831921463 ARFEELNADLFR ddPTM_KYSE-520_SHP099_60min_R1 10 ARFEELNADLFR 12 1 E9PKE3;P11142;E9PNE6;A8K7Q2;P11142-2;E9PN89;P54652 E9PKE3 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ;;;;;;;;; 191.48 8.564099999999999e-08 14983040000.0 8701329.0 8421399.0 6174101.5 4710992.8 7903338.0 7682709.0 5642814.0 6120558.0 7115541.0 6725417.0 False True 8218648.93470067 8016822.351262394 6572093.961601681 5158724.139300368 8525285.736758063 7634758.36337479 6213244.707677587 6099327.212846972 5823538.122591571 6665835.037675254 1.232951143892539 1.2026733793967852 0.9859370843197065 0.7739051611903527 1.278952402598205 1.1453566312732295 0.9321029807309017 0.9150132246558182 0.8736397000041215 1.0 22.668354184211182 -4.7441405440747175 6.370964272648295 0.9911475697910087 1.2211640240736108 0.3226934378155448 0.13316261933635187 0.1949929150743478 29.25218307567265 0.03684895607336597 0.09278788204896428 1.8024343522315132e-05 4.7441405440747175 0.2300164542826021 ARFFGS(ph)SQR ddPTM_KYSE-520_SHP099_60min_R1 2 ARFFGSSQR 9 1 Q6ZVH7-3;Q6ZVH7-2;Q6ZVH7 Q6ZVH7-3 ESPNL Espin-like protein 1 ARFFGS(0.999)S(0.001)QR;ARFFGS(0.997)S(0.003)QR 65.535 0.045208 5708800000.0 183673.0 162971.0 179592.0 157598.0 152213.0 173644.0 172401.0 177762.0 208884.0 162082.0 True False 173484.29254695185 155141.62853554197 191168.78767735965 172576.06653643367 164191.29712649944 172560.22338602878 189828.9755516172 177145.38511196268 170955.93113712905 160646.07957788787 1.079916129934808 0.9657355407812669 1.189999707304859 1.074262546523967 1.0220684971455696 1.074163925067119 1.181659559015757 1.10270593330026 1.0641774239765531 1.0 17.293526248009577 -6.5433403695135155 24.977018453054242 1.1002969949460408 1.0661088407291526 0.0057639021813301605 0.06753532601417406 828.0787490856555 1010805.7848891644 0.025685462168767922 0.019898817134164488 2.861934107776542e-07 6.5433403695135155 -0.034188154216888256 ARGDS(ph)EALDEES ddPTM_KYSE-520_SHP099_60min_R1 3 ARGDSEALDEES 12 1 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 ARGDS(1)EALDEES;ARGDS(1)EALDEES;ARGDS(1)EALDEES 110.25 0.0002878 1946160000.0 2316550.0 2159290.0 1983160.0 1746620.0 1871970.0 1990990.0 1907650.0 2025580.0 2474920.0 2127730.0 True False 2188046.3535720636 2055554.4672396344 2110997.6667681914 1912618.2396595466 2019283.3889476785 1978563.4928897596 2100493.878869858 2018553.7357539271 2025536.9156560746 2108879.9675488896 1.0375395410082004 0.9747138286057909 1.0010041819600397 0.9069355625216289 0.9575146144020006 0.9382058359582246 0.9960234395470224 0.9571686235419331 0.9604799451958933 1.0 21.00804555200908 -4.018394248118875 1.3125905104889894 0.9601167386041796 1.10793590552933 0.3847660871564106 0.027658205637789434 2.3550734772240007 2.3698748405396572 0.007913906760946963 0.5404098205538922 9.585300925617438e-05 4.018394248118875 0.1478191669251505 ARGPEEEEIGSPEPMAAPASASQKLS(ph)PLQK ddPTM_KYSE-520_SHP099_60min_R1 1 ARGPEEEEIGSPEPMAAPASASQKLSPLQK 30 2 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 ARGPEEEEIGSPEPMAAPAS(0.005)AS(0.173)QKLS(0.822)PLQK 131.24 2.9965e-05 786840000.0 339880.0 386970.0 330920.0 269650.0 266320.0 353530.0 250150.0 340310.0 428700.0 311920.0 True False 321026.1788660177 368379.3803461879 352251.6326907206 295277.45492677105 287277.86884648073 351323.48813470535 275437.6032287341 339129.5440389513 350858.88664755126 309156.6314700876 1.0383933132518897 1.1915622789473639 1.1393953641418255 0.9551063275682655 0.9292308157209179 1.136393181877121 0.8909322174943675 1.0969505730035218 1.1348903789615088 1.0 18.23797842645726 -5.241506986994529 24.324975058241435 1.020167385773823 1.1299615386894553 0.2278856252024022 0.0862813449743414 836.5928076160377 1020954.1471383936 0.023425091334035482 0.040492888279124485 5.734466407764951e-06 5.241506986994529 0.10979415291563233 ARGQGS(ph)SPVAMQK ddPTM_KYSE-520_SHP099_60min_R1 1 ARGQGSSPVAMQK 13 1 P18206-2;P18206 P18206-2 VCL Vinculin 1 ARGQGS(0.5)S(0.5)PVAMQK 109.07 0.00035076 594540000.0 274570.0 245140.0 207630.0 197900.0 223700.0 214470.0 195680.0 178800.0 300550.0 198070.0 True False 259339.0547582749 233363.10643735816 221014.16201974588 216708.35649919565 241303.9173211091 213131.41317639273 215461.24405276316 178179.78453223384 245977.69624894246 196315.25389612812 1.3210336416114314 1.1887161176015 1.1258124757676047 1.1038793583195408 1.2291653986744444 1.0856589538842567 1.09752675748144 0.9076206815111275 1.2529729166083605 1.0 17.582812750477288 -1.0000000000000002 0.3226252586004298 1.0550062333481502 3.418845646280398 0.3771385420297588 0.09168337486538071 61.05756402285134 0.8717840128524598 0.08321086786015891 85.39577509434444 0.09999999999999995 1.0000000000000002 2.363839412932248 ARGQGSS(ph)PVAMQK ddPTM_KYSE-520_SHP099_60min_R1 4 ARGQGSSPVAMQK 13 1 P18206-2;P18206 P18206-2 VCL Vinculin 1 ARGQGS(0.155)S(0.845)PVAMQK;ARGQGS(0.109)S(0.891)PVAMQK;ARGQGS(0.164)S(0.836)PVAMQK;ARGQGS(0.209)S(0.791)PVAMQK 179.46 3.2933e-07 1156910000.0 2568410.0 2365730.0 2174810.0 1930730.0 2019830.0 2279010.0 1689000.0 1821860.0 2743300.0 1952920.0 True False 2425935.177301602 2252076.7797668776 2315001.732419032 2114225.998704857 2178779.1297393595 2264785.8532341667 1859740.6030514997 1815540.3928853201 2245185.8729653093 1935618.6481487707 1.2533125673395278 1.163491983258566 1.196000945037962 1.092274038962637 1.1256241676650243 1.1700578806678745 0.9607990731181264 0.9379638879909048 1.159931929315007 1.0 20.88436331293968 -5.521853788840547 0.4695959319098477 1.0072611899634425 1.2649195351141345 0.500399001989809 0.07112196719480572 1.459143748550148 0.5490632596099917 0.06122448552578401 0.18608466377616195 3.007088509584004e-06 5.521853788840547 0.25765834515069197 ARGSASYS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 ARGSASYSPPR 11 1 A0A087WTY1;P0DPB5 A0A087WTY1 POLR1D 1 ARGS(0.002)AS(0.02)Y(0.005)S(0.973)PPR 45.825 0.064821 310480000.0 361110.0 299040.0 376790.0 312430.0 252830.0 320490.0 259900.0 199480.0 309130.0 344600.0 True False 341078.50844506145 284673.6695318092 401078.4862853157 342123.2532644956 272726.28259408084 318489.70303027076 286173.2283795647 198788.05043898206 252999.784533141 341547.1120947428 0.9986279970373417 0.8334828767424703 1.174299158395634 1.0016868570962854 0.7985026748474701 0.9324912779292477 0.8378733657691775 0.5820223430372312 0.7407463731180974 1.0 18.381725068171935 -6.320599629529527 1.189734238906603 0.7575899524779329 0.9933059518479898 0.28069164411995573 0.13421101967302304 0.5507974035152193 1.6012586236537145 0.07119086510980276 0.06080888199070339 4.779697047066122e-07 6.320599629529527 0.23571599937005683 ARHDS(ph)PDLAPNVTYSLPR ddPTM_KYSE-520_SHP099_60min_R1 12 ARHDSPDLAPNVTYSLPR 18 1 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR;ARHDS(1)PDLAPNVTYSLPR 235.99 1.1067e-23 52165010000.0 4330119.0 4450609.0 4798764.0 4084930.0 3971912.0 3875015.0 3554427.0 3580858.0 5276082.0 3595215.0 True False 4089918.6671917825 4236795.063139697 5108100.005733878 4473160.519021014 4284478.87731211 3850829.5940211737 3913743.1690245853 3568436.8393765357 4318078.508003708 3563364.1921349447 1.1477689191071316 1.188987382342548 1.4335048932153704 1.2553194896256101 1.2023690665042908 1.08067247308617 1.0983281410480008 1.0014235556536117 1.2117982544513886 1.0 21.76480851036935 -6.120973352090324 2.6390275346737555 1.0779786622464385 1.2631747385499403 0.47860883774501384 0.08848307719351618 0.25843250067172074 3.5055814434416246 0.032538878087752486 0.03292517301782196 7.56879335015551e-07 6.120973352090324 0.18519607630350188 ARHDT(ph)PDPS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 4 ARHDTPDPSPLR 12 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 ARHDT(1)PDPS(1)PLR;ARHDT(1)PDPS(1)PLR;ARHDT(1)PDPS(1)PLR;ARHDT(1)PDPS(1)PLR 109.14 0.00020081 3034180000.0 2750680.0 2800860.0 2713850.0 2549740.0 2589530.0 2531180.0 2520640.0 2792730.0 3116210.0 2557450.0 True False 2598094.2970553664 2666302.481423432 2888789.1133135264 2792066.5229927157 2793311.2785897646 2515381.966726452 2775450.890275743 2783042.671458085 2550384.8172614123 2534792.982665991 1.0249729720818455 1.0518817511555223 1.1396548487660783 1.1014968646694512 1.1019879326207833 0.9923421691348052 1.094941839138531 1.0979368691998648 1.0061511274104218 1.0 21.273436496009687 ARHS(ph)WTK ddPTM_KYSE-520_SHP099_60min_R1 1 ARHSWTK 7 1 I3L2K5;Q8IWR0;I3L2N8 I3L2K5 ZC3H7A Zinc finger CCCH domain-containing protein 7A 1 ARHS(0.999)WT(0.001)K 87.485 0.011635 0.0 262460.0 233820.0 202590.0 144520.0 214650.0 220620.0 185720.0 159580.0 212200.0 183530.0 True False 247900.82059896132 222586.93622902455 215649.27555546103 158255.13734847747 231541.73380856504 219243.02874516632 204494.39005253065 159026.45422625213 173669.82912668635 181904.06698417934 1.3628107645362426 1.2236501355870373 1.1855110175970756 0.8699922985352566 1.2728782684595106 1.205267327883518 1.1241881143334527 0.874232538407638 0.9547330744495716 1.0 17.47281827334878 -1.0000000000000009 0.24617740280176958 0.9678537198822692 3.226423499057188 0.4212866530308842 0.12445920834105471 55.575969204772065 0.7506504849372766 0.1785921709557652 51.727745676774056 0.0999999999999998 1.0000000000000009 2.258569779174919 ARIEAENR ddPTM_KYSE-520_SHP099_60min_R1 2 ARIEAENR 8 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 118.18 0.0010711 545350000.0 500500.0 507970.0 373280.0 313550.0 454080.0 441490.0 344540.0 383040.0 436370.0 378990.0 False True 472736.2672779861 483566.35872148484 397342.2260691172 343349.6977277551 489813.51263821626 438734.4971475996 379369.4655863604 381711.3236422081 357136.20799251733 375632.44344975846 1.2585075531187855 1.2873391719854537 1.057795280993247 0.9140576212599666 1.3039702006031055 1.1679888273715664 1.0099486138691367 1.016183054202193 0.95075974991038 1.0 18.518962148671033 -1.0000000000000002 0.2307099902199817 0.9821189360147425 2.6260182832384595 0.3572171226797829 0.11054038251920613 62.90602874967797 0.8242204627159949 0.17458439214493587 39.10445712127595 0.09999999999999995 1.0000000000000002 1.6438993472237171 ARIMQIHS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 ARIMQIHSR 9 1 E9PM69;P17980;R4GNH3 E9PM69 PSMC3 26S protease regulatory subunit 6A 1 ARIMQIHS(1)R 48.794 0.053167 365800000.0 57224.0 70432.0 36864.0 64970.0 50518.0 64762.0 62797.0 54674.0 59397.0 42927.0 True False 54049.670646784136 67048.3409994127 39240.312424485455 71144.72926605726 54493.47919189889 64357.79633575584 69145.13359965947 54484.348655007496 48612.00207652118 42546.70017670066 1.2703610485022458 1.5758764068882969 0.9222880331851013 1.672156218239867 1.280792140532217 1.5126389606825332 1.6251585507805044 1.2805775401788764 1.1425563410236452 1.0 15.376759623721156 -7.785927834008531 2.531436630306724 1.0180185052502972 1.406738586309783 0.2963022924062969 0.2083120671269466 0.32842342851793493 3.993195233857194 0.18701199458245693 0.052813363364494936 1.6370885311048754e-08 7.785927834008531 0.38872008105948574 ARIPS(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 2 ARIPSGK 7 1 A0A0B4J226;Q9NTM9 A0A0B4J226 CUTC Copper homeostasis protein cutC homolog 1 ARIPS(1)GK;ARIPS(1)GK 68.557 0.019793 403270000.0 848020.0 792990.0 798390.0 666800.0 787300.0 780560.0 752670.0 836660.0 1025270.0 842530.0 True False 800978.6401140403 754893.5700977436 849855.496869166 730172.4715192695 849256.030875767 775688.2355059684 828757.2289513138 833757.8217379116 839106.8129534295 835065.8396784203 0.9591802251454726 0.9039928760448989 1.0177107678077708 0.8743891042177647 1.0169929010661138 0.9288947034459967 0.9924453732539987 0.9984336349562419 1.004839107388904 1.0 19.671530423919197 -6.873658853517393 6.308721940233314 1.000002844826737 0.9508596942775857 0.2471058091763686 0.041807044654354676 0.3038837473476357 15.668927730925448 0.016444007189479023 0.011042070252805585 1.337645849934181e-07 6.873658853517393 -0.049143150549151415 ARLIDPGFGIYK ddPTM_KYSE-520_SHP099_60min_R1 1 ARLIDPGFGIYK 12 1 Q96PU4;B1AL33;Q96PU4-2 Q96PU4 UHRF2 E3 ubiquitin-protein ligase UHRF2 0 53.528 0.067126 2336100000.0 6258100.0 6699500.0 3616600.0 6169500.0 5183800.0 5049300.0 4849100.0 4882100.0 4674800.0 4177300.0 False True 5910950.717786943 6377645.963845484 3849731.8227645955 6755847.4250721885 5591735.568212628 5017785.445757261 5339294.35065543 4865165.134590704 3825974.1621179706 4140292.371890223 1.4276650504003747 1.5403854102539651 0.9298212485914433 1.6317319692058005 1.350565386680593 1.2119398813051514 1.2895935530798783 1.1750776750989556 0.9240830884537865 1.0 21.98130121834894 -7.384451887291923 1.1708030496887345 0.9536725314216228 1.3605394473989185 0.4108813409953582 0.18025778042642274 0.49442587278600686 1.1929589926094268 0.1585586125505208 0.057976134578416744 4.126179458880684e-08 7.384451887291923 0.40686691597729574 ARLS(ph)ASTASELS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 ARLSASTASELSPK 14 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;H0YF21 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 ARLS(0.914)AS(0.024)T(0.06)AS(0.002)ELS(1)PK;ARLS(0.966)AS(0.083)T(0.064)AS(0.068)ELS(0.819)PK;ARLS(0.908)AS(0.057)T(0.039)AS(0.053)ELS(0.943)PK 116.85 0.00041552 1317850000.0 2756620.0 2715030.0 2739640.0 2418150.0 2630380.0 2380650.0 2381760.0 2990210.0 3504120.0 2860620.0 True False 2603704.793414267 2584595.8834568877 2916241.577978987 2647970.248956691 2837375.941185059 2365791.480292722 2622531.5445375578 2979837.659430258 2867860.1396767395 2835277.1323286816 0.9183246193911849 0.9115849219769556 1.02855609588464 0.9339370105178568 1.0007402482221037 0.8344127821994037 0.9249647996080049 1.0509863834661006 1.0114920008970327 1.0 21.4350583266771 -7.25515424565468 24.84048711986814 1.023429395554956 0.9371843244254036 0.3705685693936326 0.05056861996883313 493.6603437380874 1951083.6799587647 0.02520596862502468 0.014084618771615503 5.55706855289549e-08 7.25515424565468 -0.08624507112955249 ARLS(ph)YSDK ddPTM_KYSE-520_SHP099_60min_R1 9 ARLSYSDK 8 1 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 ARLS(0.983)YS(0.016)DK;ARLS(1)YSDK;ARLS(0.945)YS(0.055)DK;ARLS(0.995)YS(0.005)DK;ARLS(0.989)YS(0.011)DK;ARLS(0.492)Y(0.056)S(0.451)DK;ARLS(0.997)YS(0.003)DK;ARLS(0.995)Y(0.001)S(0.005)DK;ARLS(0.999)YS(0.001)DK 172.1 0.00017651 32266880000.0 19002980.0 15888440.0 14988800.0 17509470.0 16924500.0 16254450.0 17442540.0 17330670.0 17664240.0 16287300.0 True False 17948846.817898538 15125135.493365347 15955002.030927936 19173564.76438589 18256361.862767562 16152999.94826793 19205802.165985703 17270553.950778782 14456859.29525342 16143007.193327658 1.111865131629086 0.9369465869789723 0.9883537707597981 1.1877319098458212 1.1309145591109822 1.0006190144636993 1.1897288984622383 1.0698473799799315 0.8955493311821624 1.0 23.944406019703397 -7.7425174618056225 22.57378745164637 0.9477748611866987 1.0760773240628752 0.28229858778784156 0.08240864217567752 91.02558810924958 108595.88989040148 0.05820233259464587 0.021877621283197615 1.8091831664331666e-08 7.7425174618056225 0.12830246287617642 ARLS(ph)YSDKNLIDSMDQSAFAGFSFVNPK ddPTM_KYSE-520_SHP099_60min_R1 1 ARLSYSDKNLIDSMDQSAFAGFSFVNPK 28 2 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 ARLS(0.493)Y(0.003)S(0.493)DKNLIDS(0.01)MDQSAFAGFSFVNPK 171.28 1.8675999999999998e-10 265730000.0 135720.0 182970.0 183190.0 154900.0 141780.0 138670.0 96760.0 108160.0 205080.0 86138.0 True False 128191.34104888745 174179.84655643065 194998.72051436332 169621.6494276169 152937.27938214917 137804.50909297532 106541.44508659725 107784.8182047338 167842.6416460924 85374.88433434984 1.501511153407335 2.040176662193742 2.284029103344943 1.9867862867413704 1.7913614826487816 1.6141106388302404 1.247924912780599 1.2624886000737752 1.9659486856670607 1.0 16.38152409839437 -6.271839968098278 2.080361159822566 1.395116065349122 1.9760605374206612 0.4398956580349215 0.29382273749542304 0.3134311657824722 2.6644236003284893 0.11781856145663885 0.10754159000748846 5.347613757489518e-07 6.271839968098278 0.5809444720715393 ARLSAST(ph)ASELS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 ARLSASTASELSPK 14 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;H0YF21 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 ARLS(0.199)AS(0.297)T(0.405)AS(0.099)ELS(0.999)PK 86.87299999999999 0.0049802 558270000.0 736590.0 732540.0 754760.0 623540.0 655480.0 602820.0 666700.0 779970.0 948860.0 785580.0 True False 695729.8843442381 697347.6788350426 803413.037258699 682801.0541258631 707062.5468289686 599057.5767752747 734096.5423649695 777264.4661163668 776570.9428140799 778620.3723719922 0.8935418453344135 0.8956196158991317 1.0318417880734077 0.8769370521937093 0.908096643650577 0.7693833837795733 0.9428170240763349 0.9982585785014914 0.9973678706200958 1.0 19.570560567305332 -7.00187690854279 24.99992107144371 0.9927955127364754 0.8979565242431518 0.37514570712675843 0.05926935401861279 85.83110537947827 1143252.4411842085 0.026653100295157803 0.017661517306304244 9.95687583655161e-08 7.00187690854279 -0.09483898849332362 ARPAPS(ph)RDPSPPR ddPTM_KYSE-520_SHP099_60min_R1 4 ARPAPSRDPSPPR 13 2 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 1 ARPAPS(0.965)RDPS(0.035)PPR;ARPAPS(0.565)RDPS(0.435)PPR;ARPAPS(0.587)RDPS(0.413)PPR;ARPAPS(0.934)RDPS(0.066)PPR 78.32600000000001 0.0092752 5575230000.0 405612.0 388209.0 441725.0 342654.0 361394.0 392412.0 360510.0 354656.0 424138.0 373486.0 True False 383111.8937925241 369558.8569264109 470199.3002849887 375219.73313731846 389833.65174941823 389962.8111501597 396953.869038541 353425.7811133328 347125.2308488902 370177.20460771077 1.0349418846536504 0.9983295900622645 1.2702005807820467 1.0136219315150738 1.0531001015109454 1.0534490138673351 1.0723347199598807 0.95474755526308 0.9377271926204923 1.0 18.49785653168752 -7.259872263941825 23.497918559485534 0.9596780204197396 1.0721782626664225 0.31293425499155936 0.07233854662665687 71.73436886397852 1075662.295751782 0.03644325913052717 0.01957739566598822 5.4970253031915315e-08 7.259872263941825 0.11250024224668287 ARPAPSRDPS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 ARPAPSRDPSPPR 13 2 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 1 ARPAPS(0.047)RDPS(0.953)PPR;ARPAPS(0.007)RDPS(0.993)PPR 66.436 0.017532 10041000000.0 180242.0 150590.0 171377.0 125347.0 139714.0 186104.0 154056.0 134500.0 184263.0 142788.0 True False 170243.6169564811 143355.4303598018 182424.23563289503 137259.94119305024 150708.6969360813 184942.45590422643 169629.48392167062 134033.4508925361 150805.48409222727 141523.0094073832 1.2029394913898686 1.0129478659342515 1.2890076065848417 0.9698772077262615 1.0649059652360595 1.306801322828414 1.1986000342416485 0.9470788633861797 1.0655898621977709 1.0 17.110677106004516 -7.2603492761682 24.999785493744977 1.0047507702877623 1.1453376334448409 0.27765061161145865 0.10709767932997635 137.89644605733938 3162530.7324179327 0.05422877658440343 0.02903137247097152 5.4909908982391834e-08 7.2603492761682 0.14058686315707858 ARPFPDGLAEDIDKGEVSAR ddPTM_KYSE-520_SHP099_60min_R1 8 ARPFPDGLAEDIDKGEVSAR 20 2 P13639 P13639 EEF2 Elongation factor 2 0 ;;;;;;; 271.92 9.639299999999999e-36 13834230000.0 7997960.0 6769180.0 4852500.0 4531580.0 7835210.0 6569220.0 5555050.0 5823960.0 5731800.0 5806350.0 False True 7554297.215262012 6443978.432053672 5165299.914274518 4962260.000730798 8451796.450753357 6528219.06125156 6116608.666063477 5803758.04208248 4691049.606919603 5754910.256271938 1.3126698556296388 1.119735694406487 0.8975465618504063 0.8622654011542096 1.4686235013903548 1.134373738345761 1.0628503996908285 1.0084880186893108 0.815138620416731 1.0 22.456362000055105 -7.344427484101948 2.4246290487302473 0.9105764482342111 1.1210835821817573 0.20319746561933594 0.1719241269236508 0.5487272154495316 6.104054387783323 0.1295322708413013 0.051376724450749534 4.5245200375817147e-08 7.344427484101948 0.21050713394754617 ARPGGGGPQRPGPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 ARPGGGGPQRPGPPSPR 17 2 O00268 O00268 TAF4 Transcription initiation factor TFIID subunit 4 1 ARPGGGGPQRPGPPS(1)PR;ARPGGGGPQRPGPPS(1)PR;ARPGGGGPQRPGPPS(1)PR 81.226 0.0038464 5185300000.0 888270.0 738310.0 782450.0 614360.0 779940.0 808690.0 651010.0 713330.0 870860.0 755270.0 True False 838995.8923776553 702840.4793740973 832887.9789642642 672748.5896859304 841316.840748438 803642.6657416755 716820.4440453264 710855.6247224733 712733.7765940906 748578.8953911683 1.1207848598767132 0.9388996720336732 1.112625514948615 0.8987009837278235 1.123885332499001 1.073557738121556 0.9575750110758244 0.9496068204688262 0.9521157769504751 1.0 19.51379484949315 -6.775657647132023 24.779931891957446 0.9606249363844531 1.0399760802676021 0.2256063219131621 0.07204518677176348 328.1888678813597 571969.9591664681 0.028638462201945485 0.01941388073030405 1.6762637483693285e-07 6.775657647132023 0.07935114388314901 ARPMS(ph)LSTIAILNSVK ddPTM_KYSE-520_SHP099_60min_R1 1 ARPMSLSTIAILNSVK 16 1 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 1 ARPMS(0.545)LS(0.364)T(0.091)IAILNSVK 84.10700000000001 0.0023542 116680000.0 103630.0 120920.0 117810.0 107730.0 123750.0 137740.0 97617.0 114910.0 129360.0 116000.0 True False 97881.43731871653 115110.82169537978 125404.22110266467 117968.62680979444 133488.42095881636 136880.3135679414 107485.07901011122 114511.40403019574 105871.48490022687 114972.33024663429 0.8513477730576129 1.0012045632931716 1.0907339255771566 1.0260610231760339 1.1610482337138168 1.190550050384392 0.9348777986802416 0.9959909813478619 0.9208431687269047 1.0 16.81092717196192 ARPPS(ph)GSSK ddPTM_KYSE-520_SHP099_60min_R1 5 ARPPSGSSK 9 1 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 ARPPS(0.995)GS(0.005)SK;ARPPS(0.886)GS(0.101)S(0.013)K;ARPPS(0.867)GS(0.047)S(0.086)K;ARPPS(0.965)GS(0.027)S(0.007)K;ARPPS(0.981)GS(0.007)S(0.012)K 117.95 0.0012546 2164070000.0 2097750.0 1829360.0 1497480.0 1847110.0 1918640.0 2566020.0 2625830.0 1507660.0 2275520.0 3408070.0 True False 1981383.6257390506 1741474.7996746604 1594009.9568527145 2022658.779046126 2069626.0524317054 2550004.517363211 2891274.5220312066 1502430.279350491 1862342.929191127 3377877.1512383353 0.5865765796167786 0.5155530298182197 0.4718969593871547 0.5987958378843399 0.6127002137046272 0.7549133385233905 0.8559442491777005 0.44478535248083184 0.5513353049291295 1.0 21.68768542957654 -5.780373838858339 2.233461168802083 0.6929051961952553 0.5271006285590061 0.23754614419708164 0.1472670023356867 0.5224395847712984 5.350604026214792 0.05070675976137332 0.06414167414096512 1.65815895670228e-06 5.780373838858339 -0.16580456763624918 ARPSQFPEQSSSAQQNGSVSDIS(ph)PVQAAK ddPTM_KYSE-520_SHP099_60min_R1 2 ARPSQFPEQSSSAQQNGSVSDISPVQAAK 29 1 O00139-1;O00139-5;O00139;O00139-4 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ARPSQFPEQSSSAQQNGSVSDIS(1)PVQAAK;ARPSQFPEQSSSAQQNGSVSDIS(1)PVQAAK 259.59 3.6926999999999996e-41 2631500000.0 1329860.0 1312460.0 1036470.0 1007420.0 865770.0 1260750.0 1168340.0 1336910.0 1486940.0 1425970.0 True False 1256090.014789814 1249407.4515573778 1103282.5146106353 1103164.8939081316 933901.1734425399 1252881.191598533 1286447.2090995791 1332272.5712471395 1216949.1787070464 1413337.0151878737 0.8887406197472603 0.8840124033624741 0.7806223871268078 0.7805391651484405 0.6607774107709173 0.8864702318943996 0.910219710709673 0.9426432315367057 0.8610467040978746 1.0 20.430674091730904 -6.505650039465984 24.16326332429958 0.9200758994119294 0.7988248713873511 0.45364451076918044 0.06748577106737563 494.6811694241386 693792.6048069762 0.025578493392745337 0.022027193470300112 3.1214038415764634e-07 6.505650039465984 -0.12125102802457821 ARQEEGADAS(ph)EEDPTPAGEEDVKDAR ddPTM_KYSE-520_SHP099_60min_R1 2 ARQEEGADASEEDPTPAGEEDVKDAR 26 2 Q86X53;E5RHA3;H0YB25 Q86X53 ERICH1 Glutamate-rich protein 1 1 ARQEEGADAS(0.99)EEDPT(0.01)PAGEEDVKDAR;ARQEEGADAS(1)EEDPTPAGEEDVKDAR 135.45 1.8396000000000001e-06 1715380000.0 548370.0 570060.0 525850.0 453490.0 492160.0 482310.0 429150.0 455400.0 673490.0 436330.0 True False 517950.8229515068 542673.4619224956 559747.1323897479 496589.55325326027 530890.1919926555 479299.72438619006 472532.6701003848 453820.3236911592 551201.1933012824 432464.45565960335 1.1976725859736101 1.2548394551751063 1.2943193944945381 1.1482783076261194 1.2275926611886085 1.108298539021323 1.092650884752294 1.0493817879182312 1.2745583737294188 1.0 18.722222036663847 -6.051876816698865 1.4022111844766998 1.1048734413654793 1.2400917051301459 0.3782180919134448 0.07526410833334668 0.4438278601925894 1.785949959886545 0.031086359712976026 0.03340644041898267 8.874076806883669e-07 6.051876816698865 0.1352182637646666 ARQEELYSELQAR ddPTM_KYSE-520_SHP099_60min_R1 2 ARQEELYSELQAR 13 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 126.25 6.9975e-05 896270000.0 850590.0 841520.0 827460.0 651690.0 708200.0 834310.0 638580.0 814690.0 972130.0 738590.0 False True 803406.0770908727 801092.1160527292 880799.3955828105 713626.4216622567 763931.3108932023 829102.7618184198 703133.8983402156 811864.0305400757 795615.6974030433 732046.6672143245 1.0974793180168334 1.0943183705775823 1.2032011551046855 0.9748373343161812 1.0435554795983284 1.1325818406815857 0.9605041998427076 1.1090331626390464 1.0868374012692656 1.0 19.481576096187432 -1.0000000000000002 0.12871993598571202 1.0056699936641782 1.3732761993077796 0.13214793846158335 0.06682570750328988 189.8070566556107 1.6602961180257083 0.3749987796099569 12.643326648097023 0.09999999999999995 1.0000000000000002 0.36760620564360136 ARQEFEER ddPTM_KYSE-520_SHP099_60min_R1 1 ARQEFEER 8 1 G8JLG1;Q14683 G8JLG1 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A 0 57.032 0.051226 9700000.0 15449.0 14453.0 10989.0 9445.3 17154.0 15764.0 10130.0 13231.0 13603.0 15701.0 False True 14592.013173182018 13758.656185604714 11697.368523021667 10342.978472167008 18503.922207091207 15665.611028641102 11154.03925927275 13185.104749138622 11133.038103724391 15561.901355193164 0.9376754703764084 0.8841243670403623 0.751667052504361 0.6646346250431314 1.1890527889072027 1.0066643317600346 0.7167529856851672 0.8472682385137096 0.7154034619303884 1.0 13.92573071931614 -10.468300073576701 3.0550162602321955 1.003334580065063 0.8588204223599607 0.07460290749076992 0.1509452383478618 85323492.47715525 109633253.45860462 2461367.318453733 0.04079800045107381 3.401730676208162e-11 10.468300073576701 -0.14451415770510234 ARQPLSEASNQQPLS(ph)GGEEK ddPTM_KYSE-520_SHP099_60min_R1 6 ARQPLSEASNQQPLSGGEEK 20 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 ARQPLSEASNQQPLS(1)GGEEK;ARQPLSEASNQQPLS(1)GGEEK;ARQPLSEASNQQPLS(1)GGEEK;ARQPLSEASNQQPLS(1)GGEEK;ARQPLSEASNQQPLS(1)GGEEK;ARQPLSEASNQQPLS(1)GGEEK 215.34 6.0973e-19 18586480000.0 11166400.0 10908200.0 10938800.0 9828500.0 10370900.0 10475000.0 9722310.0 10492600.0 12909300.0 9924190.0 True False 10546977.532333456 10384153.698457982 11643932.550698832 10762597.684953718 11187030.827650817 10409621.639496032 10705135.975401778 10456203.619591255 10565296.536970476 9836269.397502977 1.0722538297914959 1.0557004163686377 1.1837752790356417 1.0941747577273448 1.137324566414452 1.0582896033875002 1.0883329383108773 1.0630253398962062 1.0741162233369257 1.0 23.22967981758871 -8.18675806624073 0.5392195470043878 0.9984936083919478 1.1062923602696995 0.4106993080547743 0.03608609691448719 1.20315641485111 0.7853882077245882 0.04416332009180315 0.01853784380392771 6.504919609802592e-09 8.18675806624073 0.10779875187775168 ARQPQS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 3 ARQPQSPPR 9 1 O95613-2;O95613 O95613-2 PCNT Pericentrin 1 ARQPQS(1)PPR;ARQPQS(1)PPR;ARQPQS(1)PPR 116.24 0.00054662 1556336000.0 183947.0 187803.0 186435.0 149893.0 182797.0 173143.0 142753.0 156987.0 190939.0 188150.0 True False 173743.09322074658 178780.6619819501 198452.8984065467 164138.78565302625 197182.08392734342 172062.35031286502 157183.86637502105 156442.44873804136 156269.29078049175 186483.1373784849 0.9316825942718819 0.9586961292864677 1.0641868278082862 0.8801803099220241 1.0573721929996491 0.9226697530492982 0.842885145459569 0.838909356294917 0.8379808114410294 1.0 17.50868565601487 -6.525439993798076 7.106147311327108 0.8683875489371056 0.9780374606124498 0.31678026479599475 0.06751946698150141 0.13850448911338883 43.04360904562696 0.023968609536359785 0.01932358311768799 2.9823595902526504e-07 6.525439993798076 0.10964991167534421 ARQS(ph)LGTGTLVS ddPTM_KYSE-520_SHP099_60min_R1 2 ARQSLGTGTLVS 12 1 Q9Y5J5 Q9Y5J5 PHLDA3 Pleckstrin homology-like domain family A member 3 1 ARQS(0.748)LGT(0.252)GTLVS;ARQS(0.986)LGT(0.013)GTLVS 89.45100000000001 0.004462 2082150000.0 1456300.0 1889160.0 1365580.0 1000390.0 1067020.0 1492900.0 1079550.0 1515730.0 1669400.0 1835490.0 True False 1375516.1359379233 1798401.9179130269 1453607.4718052524 1095466.7648217801 1150988.403486678 1483582.2573368635 1188681.4493926833 1510472.2864040413 1366279.0421493412 1819228.9865896122 0.7560984054659947 0.9885517057884898 0.7990239175609409 0.6021599110925442 0.6326792349787475 0.8155005600026397 0.6533984771323513 0.8302815629799432 0.7510209282178456 1.0 20.79489571595585 -9.526559033801062 12.185091217033222 0.9999993523216271 0.7590511535969753 0.31417175874838044 0.10693411387162886 0.0 0.0 0.11081944681118622 0.026877663798531713 2.9746848814399225e-10 9.526559033801062 -0.24094819872465179 ARRGS(ph)S(ph)S(ph)DEEGGPK ddPTM_KYSE-520_SHP099_60min_R1 1 ARRGSSSDEEGGPK 14 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 3 ARRGS(1)S(1)S(1)DEEGGPK 58.49 0.026249 543400000.0 217220.0 228980.0 236560.0 197520.0 156360.0 177980.0 137920.0 146460.0 301360.0 133380.0 True False 205170.37358266528 217979.45709401264 251809.0361093829 216292.24141344675 168664.6424332973 176869.16080167115 151862.29956948644 145951.96444402085 246640.62066738092 132198.3569680697 1.5519888316934283 1.648881741750103 1.904781889007918 1.6361189834279748 1.2758452245668637 1.3379074056449198 1.148745741266408 1.1040376581932339 1.8656859761649898 1.0 17.01234472080777 -5.713165194894673 4.74190994100167 1.2882088660930973 1.7063920430282749 0.4125941258367375 0.23246647039758284 0.1985558904160541 9.566787259011981 0.06913325475925676 0.08797411141247685 1.9356855369256452e-06 5.713165194894673 0.4181831769351776 ARS(ph)DPTHQHR ddPTM_KYSE-520_SHP099_60min_R1 11 ARSDPTHQHR 10 1 A0A2R8Y6L5;A0A2R8Y6I6;Q13627-5;Q13627-2;Q13627 A0A2R8Y6L5 DYRK1A Dual specificity tyrosine-phosphorylation-regulated kinase 1A 1 ARS(0.857)DPT(0.143)HQHR;ARS(0.999)DPT(0.001)HQHR;ARS(0.984)DPT(0.016)HQHR;ARS(1)DPTHQHR;ARS(1)DPTHQHR;ARS(1)DPTHQHR;ARS(1)DPTHQHR;ARS(1)DPTHQHR;ARS(0.999)DPT(0.001)HQHR;ARS(1)DPTHQHR;ARS(1)DPTHQHR 167.32 3.477e-05 9588401900.0 475338.0 459906.6 452004.19999999995 430233.39999999997 484429.60000000003 496207.36 393566.1 436730.2 546796.6000000001 358394.60000000003 True False 448970.0535771897 437811.99660211965 481141.11396429065 471122.6529816119 522551.45349261444 493110.34580746613 433351.60222298786 435215.2848697948 447512.12106057024 355219.50267077977 1.2639228707926509 1.2325111467989618 1.3544895771396201 1.326285999049585 1.4710663394428523 1.388184888779839 1.2199544196328138 1.2252009858624113 1.2598185564020903 1.0 18.43835126680618 -8.318325110806063 0.7479412397230286 1.000397521484453 1.3315759683818 0.6405964017523962 0.07181227173689256 0.8040292017338655 0.8757876489617196 0.08175457056469684 0.02919448338967471 4.804795290718844e-09 8.318325110806063 0.3311784468973471 ARS(ph)GTFDLLEMDR ddPTM_KYSE-520_SHP099_60min_R1 4 ARSGTFDLLEMDR 13 1 H0YA31;H0YA26;E9PHT6;Q9NVE7 H0YA31 PANK4 Pantothenate kinase 4 1 ARS(0.993)GT(0.007)FDLLEMDR;ARS(0.997)GT(0.003)FDLLEMDR;ARS(0.996)GT(0.004)FDLLEMDR;ARS(0.998)GT(0.002)FDLLEMDR 247.91 2.6135999999999997e-16 733560000.0 394304.0 389838.0 414629.0 382001.0 368856.0 395867.0 355184.0 356516.0 492913.0 426143.0 True False 372431.1710944632 371109.5973212321 441356.6487698562 418306.260187211 397882.86869644595 393396.247213592 391089.4649817898 355279.3292074603 403412.42452555354 422367.7045542371 0.8817700005911285 0.8786410355708841 1.0449583242536498 0.9903841029433997 0.9420295737723787 0.9314070251388626 0.9259454753874754 0.8411612094784064 0.9551213792524957 1.0 18.688140000750845 -6.409370314214974 2.600225335159811 0.9181414622332591 0.9516483847948514 0.001211374538161114 0.05876603093059478 0.9881381978612543 13.040096349758402 0.02462793075122838 0.02077106668335166 3.896096326627512e-07 6.409370314214974 0.03350692256159227 ARS(ph)LEQPK ddPTM_KYSE-520_SHP099_60min_R1 1 ARSLEQPK 8 1 Q15772-1;Q15772;B9ZVR7;C9J8D8 Q15772-1 SPEG Striated muscle preferentially expressed protein kinase 1 ARS(1)LEQPK 71.153 0.02503 0.0 87526.0 71635.0 92383.0 82869.0 86522.0 70752.0 75437.0 75966.0 103740.0 71715.0 True False 82670.75830124473 68193.54707367289 98338.15599802625 90744.84484452664 93330.78915716126 70310.4105238781 83062.90815417163 75702.49167659762 84903.43107258463 71079.66089342565 1.1630719289052092 0.9593960665614303 1.3834921939972538 1.2766640091401995 1.3130449411836413 0.9891776302830013 1.1685889762292654 1.0650373218592486 1.1944827817888137 1.0 16.117149178128475 -6.259296023510375 24.999496085852382 1.092842903748042 1.217031090710184 0.23785361943063932 0.12082178240349112 344.98146393445353 4023770.4808118385 0.04261923916562817 0.040687505601565525 5.504323831616466e-07 6.259296023510375 0.12418818696214196 ARS(ph)LPSS(ph)PERR ddPTM_KYSE-520_SHP099_60min_R1 2 ARSLPSSPERR 11 2 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 2 ARS(0.953)LPS(0.431)S(0.616)PERR;ARS(0.994)LPS(0.179)S(0.826)PERR 59.606 0.031992 678340000.0 677150.0 731530.0 747050.0 540300.0 649480.0 643970.0 562330.0 550530.0 901620.0 588500.0 True False 639587.1396349407 696386.2007510841 795206.0383222611 591649.9495528821 700590.3809642992 639950.7443614567 619175.8042119299 548620.3399246675 737908.5359905892 583286.3478460719 1.0965234176948822 1.193901080185849 1.363320162144639 1.0143387578634315 1.2011088268247683 1.0971467902937073 1.061529738349592 0.9405677707880234 1.2650879601682734 1.0 19.153844781872795 -6.028560823552536 1.1475124994361048 1.063991635634916 1.196383484371192 0.1624983323040068 0.11372764929884338 0.8311183415725647 2.305199115288048 0.05257329513514569 0.05905039828861566 9.363520732871145e-07 6.028560823552536 0.13239184873627607 ARS(ph)NENLDKIDMSLDDIIK ddPTM_KYSE-520_SHP099_60min_R1 6 ARSNENLDKIDMSLDDIIK 19 2 Q96QD9-4;Q96QD9;H9KVD1 Q96QD9-4 FYTTD1 UAP56-interacting factor 1 ARS(1)NENLDKIDMSLDDIIK;ARS(1)NENLDKIDMSLDDIIK;ARS(0.935)NENLDKIDMS(0.065)LDDIIK;ARS(1)NENLDKIDMSLDDIIK;ARS(1)NENLDKIDMSLDDIIK;ARS(0.702)NENLDKIDMS(0.298)LDDIIK 205.07 7.9161e-14 1261068000.0 993808.0 983970.0 867434.0 831668.0 824335.0 851170.0 762173.0 839208.0 1160917.0 831221.0 True False 938679.4891328679 936698.6042309185 923350.1835834729 910709.4766698991 889205.4746754413 845857.5323045197 839220.8849316571 836296.9833206196 950123.7371360295 823857.0286201532 1.139371828513773 1.136967424796702 1.1207650739230288 1.1054217479884971 1.0793201293247903 1.026704273824324 1.0186486924038705 1.015099652328392 1.1532628892264907 1.0 19.652034469615817 -5.764485730622479 1.7283332865167897 1.0424808098015879 1.1330140910387345 0.49171915178147396 0.04011553930923549 0.3080114985695344 1.9032765074195388 0.014262987081213404 0.018941350538244646 1.7199438515692963e-06 5.764485730622479 0.09053328123714666 ARS(ph)PGREEVAR ddPTM_KYSE-520_SHP099_60min_R1 3 ARSPGREEVAR 11 2 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 ARS(1)PGREEVAR;ARS(1)PGREEVAR;ARS(1)PGREEVAR 81.619 0.0062857 1064280000.0 525210.0 565600.0 567890.0 479140.0 528950.0 519800.0 453760.0 447300.0 599940.0 477540.0 True False 496075.5543198218 538427.7270170922 604497.098056127 524677.3215413067 570575.3556861886 516555.7353899808 499630.4890708391 445748.42070060456 491006.0192566649 473309.3671204985 1.0481000140306274 1.1375809658971219 1.2771712119997611 1.1085293425171756 1.2055019302859633 1.0913701930992468 1.0556108198544052 0.94176970004298 1.0373891863662632 1.0 18.852423948730635 -6.74385583598071 2.1174624944413805 0.9935109033601699 1.1580270530637176 0.5613843957522933 0.061688283835380886 0.22918800555174668 2.1039047022670485 0.030290539871656964 0.019834575464525158 1.8036163518065152e-07 6.74385583598071 0.16451614970354766 ARS(ph)PQELDQGTGAALCFFNPLFPGDLGPTK ddPTM_KYSE-520_SHP099_60min_R1 2 ARSPQELDQGTGAALCFFNPLFPGDLGPTK 30 1 Q13671;Q13671-2;E9PNR2 Q13671 RIN1 Ras and Rab interactor 1 1 ARS(0.995)PQELDQGT(0.005)GAALCFFNPLFPGDLGPTK;ARS(1)PQELDQGTGAALCFFNPLFPGDLGPTK 264.99 2.2088e-41 772890000.0 517770.0 584880.0 551280.0 489880.0 534230.0 748490.0 646070.0 870050.0 893320.0 755390.0 True False 489048.26595109457 556781.4868772217 586816.3908791869 536438.0479122069 576270.8616470991 743818.3962717317 711381.0606355726 867031.9996211968 731115.6067646157 748697.8322845272 0.6531984531848382 0.7436664871571691 0.7837826765019661 0.7164947256162811 0.7696975158705939 0.9934827699475144 0.950157767206179 1.15805330566484 0.9765162596153615 1.0 19.51402405183553 -6.285843629044695 2.0920471873585176 1.035675475457087 0.7265114858713174 0.8465857786296284 0.06026187737998731 0.1177475856129609 1.0121990909591672 0.023726479094444444 0.02145566703444389 5.177932336922251e-07 6.285843629044695 -0.3091639895857695 ARS(ph)PSVAAMASPQLCR ddPTM_KYSE-520_SHP099_60min_R1 6 ARSPSVAAMASPQLCR 16 1 P25325-2 P25325-2 1 ARS(0.963)PS(0.037)VAAMASPQLCR;ARS(0.976)PS(0.024)VAAMASPQLCR;ARS(0.999)PS(0.001)VAAMASPQLCR;ARS(0.989)PS(0.011)VAAMASPQLCR;ARS(1)PSVAAMASPQLCR;ARS(0.931)PS(0.069)VAAMASPQLCR 187.5 6.7318e-12 16160800000.0 3368170.0 3198750.0 2802410.0 2286200.0 2620580.0 2752070.0 2611560.0 2648520.0 3520740.0 2659050.0 True False 3181330.8958195704 3045077.248578363 2983057.8326145406 2503479.7606289038 2826804.736939435 2734893.3103014696 2875561.971169434 2639332.9022892145 2881462.3666328457 2635492.8857095973 1.207110409240588 1.1554109157682233 1.131878537327701 0.9499095118804886 1.0725905398064952 1.0377160663687806 1.091090773479815 1.0014570392507751 1.0933295939658825 1.0 21.32964136696349 -5.049238858346913 6.103569653741904 1.0389116399709601 1.173083444325146 0.6565828596395795 0.043781935619042756 0.11932312751594283 10.792274328032828 0.01141250285573701 0.020551284852384975 8.928143082430186e-06 5.049238858346913 0.13417180435418596 ARS(ph)PTDDKVK ddPTM_KYSE-520_SHP099_60min_R1 6 ARSPTDDKVK 10 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 ARS(0.5)PT(0.5)DDKVK;ARS(0.974)PT(0.026)DDKVK;ARS(0.796)PT(0.204)DDKVK;ARS(0.832)PT(0.168)DDKVK;ARS(0.832)PT(0.168)DDKVK;ARS(0.584)PT(0.416)DDKVK 107.65 0.00073844 52778750000.0 34652000.0 32825483.0 30901423.0 28981224.0 30266310.0 28655910.0 27676544.0 28845660.0 36820700.0 29190590.0 True False 32729784.4829506 31248497.524625517 32893378.17060496 31735590.815437272 32648096.40525281 28477057.836319916 30474359.164559714 28745601.13808767 30134989.054311853 28931984.08253537 1.1312665038657943 1.0800675624416818 1.1369209272605973 1.09690336911924 1.1284430515417243 0.9842760093840205 1.0533103805678985 0.9935578927488693 1.0415804518744591 1.0 24.786161927260704 -6.255294814174322 24.997988099742486 1.0165651540304235 1.1130386753644657 0.798817447519925 0.025119035526221436 209.3885455915725 851858.3570674874 0.0077015536389718866 0.007502976242223011 5.555270182138783e-07 6.255294814174322 0.09647352133404219 ARS(ph)PVLWGWSLPS ddPTM_KYSE-520_SHP099_60min_R1 2 ARSPVLWGWSLPS 13 1 A1IGU5 A1IGU5 ARHGEF37 Rho guanine nucleotide exchange factor 37 1 ARS(1)PVLWGWSLPS;ARS(1)PVLWGWSLPS 101.3 0.0019586 497850000.0 526580.0 459120.0 373810.0 339250.0 399520.0 392850.0 341030.0 356710.0 588290.0 341570.0 True False 497369.5576887944 437063.18604682985 397906.3907171468 371492.2180007679 430959.95104215236 390398.0774296919 375504.6405320619 355472.6562667397 481471.3655840635 338543.9555374386 1.469143222182833 1.2910086826184561 1.1753463153269723 1.0973234403521515 1.2729807872599683 1.1531680629474979 1.1091754390827868 1.0500044394602372 1.4221827260797717 1.0 18.368983635619458 -4.394087439076647 1.9622249962402154 1.1602715399841947 1.5159492880236611 0.4252592924511661 0.11227821751649109 0.5319155560064809 2.7172558503210245 0.029100109980047383 0.3099902467731745 4.035641328338716e-05 4.394087439076647 0.3556777480394664 ARS(ph)PYSPAEEDALFMDLPTGPR ddPTM_KYSE-520_SHP099_60min_R1 1 ARSPYSPAEEDALFMDLPTGPR 22 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GTN9 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 1 ARS(0.866)PY(0.065)S(0.069)PAEEDALFMDLPTGPR 54.152 0.038107 21812000.0 25975.0 27335.0 24640.0 24005.0 24834.0 26059.0 23606.0 24355.0 30794.0 26194.0 True False 24534.114970121253 26021.785569328495 26228.333825393926 26286.42798263357 26788.294513868655 25896.356114904764 25992.32485235857 24270.518189499733 25202.58585356824 25961.941538623618 0.9450030897582068 1.0023050676166052 1.0102608769214736 1.012498543051074 1.0318293981987314 0.9974737858637698 1.0011703020627234 0.9348498899203069 0.9707511980979664 1.0 14.664110657470651 -9.371659992819307 6.347761097658867 0.9999999993836723 0.9914357153020561 0.007806230895805011 0.029094391104951826 12418892.865302421 18334906.797504786 0.030456126981494802 0.007614031830714243 4.2495212684161074e-10 9.371659992819307 -0.008564284081616247 ARS(ph)QS(ph)VS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 ARSQSVSPSK 10 1 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 3 ARS(1)QS(1)VS(1)PSK 122.52 0.00058362 403950000.0 861490.0 726230.0 711460.0 755700.0 693380.0 829560.0 821470.0 605260.0 972010.0 651920.0 True False 813701.4323622606 691340.8207065462 757321.8499762483 827521.5007905108 747945.0612074675 824382.4083303427 904512.2043746084 603160.4943287459 795517.4863780886 646144.4959860847 1.2593180587578423 1.069947705197871 1.1720626805316903 1.2807065693991955 1.1575507736331088 1.2758483798151807 1.3998605729732747 0.9334761776593938 1.2311758303598097 1.0 19.301497302408123 -7.272206372604391 24.97771017561652 1.061744522336558 1.223153862515558 0.35314157476340136 0.10861882516185126 912.3289882342979 2116445.687280856 0.058150699106739666 0.028385351939329763 5.343103998454771e-08 7.272206372604391 0.161409340179 ARS(ph)RT(ph)PPSAPSQSR ddPTM_KYSE-520_SHP099_60min_R1 2 ARSRTPPSAPSQSR 14 2 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ARS(0.982)RT(0.993)PPS(0.025)APSQSR;ARS(0.933)RT(0.994)PPS(0.072)APSQS(0.001)R 109.87 0.00069122 1487230000.0 412390.0 415990.0 427540.0 341714.0 358832.0 373113.0 368290.0 328237.0 480880.0 336644.0 True False 389513.904620916 396005.2159862805 455099.91248818685 374190.3958199394 387070.0369252037 370784.2633677598 405520.3473640235 327098.42245809134 393564.3139983081 333661.59606506914 1.1673920799232609 1.186846855186335 1.363956529175852 1.1214667802133467 1.1600676898090456 1.111258435913767 1.215364165808704 0.9803298501104758 1.1795313534421774 1.0 18.34802611853907 -7.107795613346654 0.3651636912343893 1.0026822440292245 1.24064094266227 0.358222833440332 0.08258332926913539 1.351841112586564 0.5060587465697918 0.10469650578516672 0.10801551615433082 7.801971987183268e-08 7.107795613346654 0.23795869863304553 ARS(ph)VDALDDLTPPSTAESGSR ddPTM_KYSE-520_SHP099_60min_R1 5 ARSVDALDDLTPPSTAESGSR 21 1 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 ARS(1)VDALDDLTPPSTAESGSR;ARS(1)VDALDDLTPPSTAESGSR;ARS(1)VDALDDLTPPSTAESGSR;ARS(1)VDALDDLTPPSTAESGSR;ARS(1)VDALDDLTPPSTAESGSR 144.44 8.746299999999999e-07 2338870000.0 1358245.0 1610430.0 1310539.0 1334123.0 1399170.0 1749100.0 1580700.0 1857950.0 2640530.0 1612000.0 True False 1282900.4422557193 1533062.5254952887 1395018.440876541 1460917.6488012953 1509276.7188116917 1738183.218104298 1740492.5821453526 1851505.205098792 2161076.3143444355 1597718.9341170208 0.8029575257958085 0.9595320508250317 0.8731313193377769 0.9143771270437321 0.9446446972513306 1.0879155156691591 1.0893609288715325 1.1588428762797545 1.3526010540388032 1.0 20.607582205362316 -6.398555008586726 1.1647597259805644 1.1830900787718397 0.8835066934106315 0.6540355183236385 0.08898275339532072 0.28013959019366763 0.7808026853963483 0.04734476809644156 0.03765504225052454 3.9943396501842345e-07 6.398555008586726 -0.2995833853612082 ARS(ph)VS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 2 ARSVSPPPK 9 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 ARS(1)VS(1)PPPK;ARS(1)VS(1)PPPK 118.76 0.0045514 1816660000.0 4230000.0 4019700.0 3890600.0 3826100.0 3726400.0 3656700.0 3420100.0 3620000.0 4711600.0 3883800.0 True False 3995353.467704054 3826587.578307287 4141394.301180101 4189731.3936410863 4019646.4796843114 3633877.1789160096 3765837.084959401 3607443.064914351 3856092.2097704792 3849392.553550682 1.03791790837719 0.9940756950801601 1.0758565782957303 1.0884136484798037 1.0442287773369818 0.9440131471039811 0.9782938561269336 0.937146059989866 1.0017404450511593 1.0 21.876199371203764 -6.245343444855827 20.69159080259098 0.9686887971211272 1.0488791856353523 0.6087301793522661 0.030339487191397306 58.571395379774806 75293.7693884756 0.010412442663313069 0.010354817902266252 5.684032535140628e-07 6.245343444855827 0.08019038851422511 ARS(ph)VS(ph)PPPKR ddPTM_KYSE-520_SHP099_60min_R1 5 ARSVSPPPKR 10 2 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR;ARS(1)VS(1)PPPKR 106.58 0.00066262 77581100000.0 938480.0 926770.0 746508.0 771122.0 806349.0 803802.0 777817.0 720635.0 1007220.0 765488.0 True False 886420.6435865008 882246.578089869 794629.1001350309 844409.2030337162 869804.0788017828 798785.1735627865 856446.3331223835 718135.2853824733 824334.2379499576 758706.371860653 1.1683316187428887 1.162830062869046 1.0473473396384967 1.1129591556782177 1.1464304387857895 1.0528251813726621 1.1288244897983823 0.9465259710700951 1.0864996901612394 1.0 19.533182128427953 -1.000048759616891 0.12096011347276683 0.9559597512784694 1.6281782785452514 0.4347457754890034 0.0522685516789889 86.73313713947017 0.721671790326375 0.348197855314918 9.835684122083213 0.09998877331354028 1.000048759616891 0.672218527266782 ARS(ph)VSPPPKR ddPTM_KYSE-520_SHP099_60min_R1 1 ARSVSPPPKR 10 2 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 ARS(0.979)VS(0.021)PPPKR 91.62 0.0021343000000000004 710120000.0 265970.0 272450.0 250160.0 238610.0 267920.0 263320.0 217140.0 258080.0 281770.0 285760.0 True False 251216.11390194987 259361.09304421282 266285.71387015167 261287.42265928772 289003.7797437259 261676.52220640532 239090.6302821801 257184.78071632472 230607.67084366851 283228.3887179161 0.886973636502769 0.9157312733312404 0.940180167233735 0.92253260290062 1.0203912858169095 0.9239064042659384 0.8441619548254556 0.9080473249186551 0.8142110043684369 1.0 18.11160635218085 -6.541300143280321 22.933248009302403 0.8839553959885464 0.9390084267318886 0.12569331720100851 0.055353419087463274 160.19184143026484 199422.31529626827 0.020401112628640587 0.01580731533384261 2.8754105160324135e-07 6.541300143280321 0.05505303074334211 ARSDEGQLS(ph)PATR ddPTM_KYSE-520_SHP099_60min_R1 4 ARSDEGQLSPATR 13 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 ARSDEGQLS(0.999)PAT(0.001)R;ARSDEGQLS(0.993)PAT(0.007)R;ARSDEGQLS(1)PATR;ARSDEGQLS(1)PATR 269.55 4.1033999999999995e-22 4625170000.0 8179200.0 8499700.0 8457300.0 6140800.0 7068200.0 7232600.0 5939790.0 5975330.0 9567400.0 6735600.0 True False 7725483.4711690415 8091361.653690205 9002471.090158433 6724419.785701154 7624427.127443278 7187458.660603243 6540241.93996404 5954602.974882501 7830201.334527139 6675927.824217506 1.1572149481820613 1.2120205410756675 1.3484973665385043 1.007263703676924 1.1420775251321635 1.0766231825530101 0.979675351827314 0.8919513709063276 1.1729008372622614 1.0 22.670536926630085 -5.689713600746413 1.190419761155939 1.0143435144029862 1.2294280558222732 0.4184424081393021 0.09692904072237857 0.447133534917743 1.3303851409353196 0.03916820582602957 0.0619677089569608 2.0430848304811043e-06 5.689713600746413 0.215084541419287 ARSNENLDKIDMS(ph)LDDIIK ddPTM_KYSE-520_SHP099_60min_R1 3 ARSNENLDKIDMSLDDIIK 19 2 Q96QD9-4;Q96QD9;H9KVD1 Q96QD9-4 FYTTD1 UAP56-interacting factor 1 ARS(0.059)NENLDKIDMS(0.941)LDDIIK;ARS(0.036)NENLDKIDMS(0.964)LDDIIK;ARS(0.302)NENLDKIDMS(0.698)LDDIIK 173.55 4.2969e-09 801739000.0 1266310.0 1190890.0 1121770.0 1114590.0 1164668.0 1105460.0 938322.0 1058740.0 1536810.0 989479.0 True False 1196065.2599735986 1133677.8568376666 1194081.089095459 1220520.2984862977 1256320.745545557 1098560.4140904339 1033176.7449002281 1055067.478051774 1257764.0438274415 980712.9858630137 1.2195874605668426 1.1559731268777338 1.2175642683518506 1.2445234396608473 1.2810279497217143 1.1201650533093697 1.0534955280428422 1.0758167713292075 1.282499632367595 1.0 19.9034714554712 -6.374790536623656 6.774240889851958 1.1064349170016587 1.2205169265446631 0.387537787582136 0.07384644843468983 0.28708709444510117 15.264571379124373 0.026163409336544846 0.023007142961061655 4.218999397640653e-07 6.374790536623656 0.1140820095430044 ARSPQELDQGT(ph)GAALCFFNPLFPGDLGPTK ddPTM_KYSE-520_SHP099_60min_R1 1 ARSPQELDQGTGAALCFFNPLFPGDLGPTK 30 1 Q13671;Q13671-2;E9PNR2 Q13671 RIN1 Ras and Rab interactor 1 1 ARS(0.31)PQELDQGT(0.69)GAALCFFNPLFPGDLGPTK 108.19 0.00018263 26718000.0 22926.0 25268.0 20133.0 17768.0 19258.0 25066.0 21704.0 27363.0 32928.0 27944.0 True False 21654.249078152043 24054.08735195877 21430.805393938972 19456.665377856014 20773.49503696877 24909.55379623941 23898.052130627417 27268.0841395722 26949.1052473305 27696.43790010301 0.7818423855174352 0.868490288849358 0.7737747890626493 0.7024970304135627 0.7500421213693876 0.8993775259506119 0.8628565238903352 0.9845339764602286 0.9730170119540993 1.0 14.757412819567127 -6.873536487189997 1.2812631548694289 0.9908560171913455 0.7794081478306898 0.7702055622657012 0.04792547766037748 0.23811611309056674 0.7686364859217747 0.035889927920319864 0.018680148919439473 1.3380227966340402e-07 6.873536487189997 -0.21144786936065574 ARSPS(ph)VAAMASPQLCR ddPTM_KYSE-520_SHP099_60min_R1 1 ARSPSVAAMASPQLCR 16 1 P25325-2 P25325-2 1 ARS(0.375)PS(0.599)VAAMAS(0.025)PQLCR 113.14 0.009611 260690000.0 248450.0 224700.0 245510.0 170390.0 187640.0 174620.0 191640.0 186010.0 266030.0 207570.0 True False 234667.98322720404 213905.07471842403 261335.96742988864 186583.81437037856 202406.200474443 173530.13180799998 211012.84142616272 185364.77472506047 217725.65807055787 205731.09128701626 1.140653956381429 1.0397313958734813 1.270279401110539 0.9069305626249498 0.9838386566086179 0.8434803447666906 1.0256730769574243 0.9010051595286458 1.0583021589420722 1.0 17.650400313297368 -5.278365717395861 24.99496397141066 0.9546536247992115 1.139172575682167 0.5440429757037156 0.07955485471098218 571.6802777977377 844193.7359751954 0.021123926778597348 0.03141516989430623 5.267860704525425e-06 5.278365717395861 0.18451895088295545 ARSPT(ph)DDKVK ddPTM_KYSE-520_SHP099_60min_R1 1 ARSPTDDKVK 10 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 ARS(0.152)PT(0.848)DDKVK 109.0 0.0017747 23838000000.0 4482300.0 3952600.0 3808300.0 3275400.0 4095200.0 3751600.0 3654900.0 3647400.0 4753000.0 3473800.0 True False 4233657.8837564755 3762711.163026446 4053789.111495443 3586693.031215082 4417468.941499349 3728184.8728146427 4024372.9603865705 3634748.020709563 3889975.01337955 3443024.8345755003 1.2296332693395906 1.0928504276938684 1.1773917721378404 1.0417273193027359 1.2830197729445045 1.082822533074845 1.1688480779961457 1.0556845202534535 1.1298132311784952 1.0 21.71524515644452 -8.440107529077821 0.46481567103334204 0.9908412901125558 1.157411761317456 0.2978436312419088 0.07049311755274085 2.354487089988026 0.9941485582133514 0.11453448330780681 0.03934603759133634 3.6298816964099857e-09 8.440107529077821 0.1665704712049001 ART(ph)PLTAAQQK ddPTM_KYSE-520_SHP099_60min_R1 1 ARTPLTAAQQK 11 1 I3L2J0 I3L2J0 CIC 1 ART(0.999)PLT(0.001)AAQQK 143.18 0.00027023 1237100000.0 1424500.0 1424300.0 1188100.0 943220.0 1023500.0 1338700.0 1112700.0 1425500.0 1623000.0 1330200.0 True False 1345480.1453296535 1355874.4900821156 1264686.8270272126 1032863.3452105654 1104043.6270816044 1330344.6767344475 1225182.574905508 1420555.2732142005 1328304.1125005267 1318415.4628799402 1.0205281894908858 1.0284121570603777 0.9592475684900093 0.7834126451720945 0.8374019102217878 1.0090481446784985 0.9292841364506036 1.0774716416865642 1.0075004047654188 1.0 20.330373637535452 -7.24556683800752 23.81086369910761 1.0318645157282729 0.9353664015600784 0.22535731273646742 0.07636904006461386 667.7314686241789 1001686.1796918612 0.04043591314177949 0.023225238173501698 5.6811095244256124e-08 7.24556683800752 -0.09649811416819443 ARTDEVPAGGS(ph)RS(ph)EAEDEDDEDYVPYVPLR ddPTM_KYSE-520_SHP099_60min_R1 1 ARTDEVPAGGSRSEAEDEDDEDYVPYVPLR 30 2 D6RGI7;A0A499FJW5;Q9UJV9;D6RD33 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 2 ART(0.009)DEVPAGGS(0.993)RS(0.992)EAEDEDDEDY(0.007)VPYVPLR 102.49 0.0012408 587100000.0 359570.0 384020.0 330710.0 287970.0 294260.0 306370.0 293170.0 319100.0 421160.0 345990.0 True False 339623.9353149758 365571.1027742284 352028.0957547091 315338.5822186628 317416.5878896264 304457.83118781913 322806.4846634736 317993.11657849996 344687.96057961957 342924.7977761464 0.9903743838807326 1.0660386917042524 1.0265460475229473 0.9195560783694293 0.925615732510627 0.8878268155648585 0.9413331632966201 0.9272969427719214 1.0051415436122066 1.0 18.387532707480048 -5.251757991575692 22.419664465830984 0.9375993124319301 1.031491657071522 0.5001876966717709 0.03798806750096043 122.69877317638647 284135.7628585216 0.010179464235623596 0.017289376405242037 5.6006961053892855e-06 5.251757991575692 0.09389234463959195 ARTEWK ddPTM_KYSE-520_SHP099_60min_R1 1 ARTEWK 6 1 H3BPF8;H3BQL2;A0A1B0GVY7;D6RF30;P0CJ92;A6NMD2 H3BPF8 GOLGA8S;GOLGA8T;GOLGA8K;GOLGA8H;GOLGA8J Golgin subfamily A member 8K;Golgin subfamily A member 8H;Golgin subfamily A member 8J 0 66.138 0.052282 1401200000.0 1700200.0 1617800.0 1365000.0 1541400.0 1618400.0 1636900.0 1612200.0 1619200.0 1702300.0 1656600.0 False True 1605886.5167353293 1540078.4596326917 1452990.0840772197 1687894.1925611899 1745758.8725636227 1626683.499922776 1775176.90955573 1613583.373124122 1393205.2314908504 1641923.812815299 0.9780517854734204 0.9379719373166409 0.8849314887429965 1.0279978762638617 1.0632398768675415 0.9907180145792566 1.0811566868696243 0.9827394916439006 0.8485200230466314 1.0 20.646955755256215 -13.295605771001464 22.338339995262057 0.9828587403680394 0.9820760254082068 0.0 0.06938687883090328 0.0 0.0 0.0 0.01669349575787542 5.0628403068675723e-14 13.295605771001464 -0.00078271495983262 ARTPLT(ph)AAQQK ddPTM_KYSE-520_SHP099_60min_R1 2 ARTPLTAAQQK 11 1 I3L2J0 I3L2J0 CIC 1 ART(0.323)PLT(0.677)AAQQK;ART(0.172)PLT(0.828)AAQQK 122.45 0.00067972 1691210000.0 2250400.0 2342800.0 1775020.0 1474730.0 1726340.0 2092200.0 1695860.0 2367500.0 2678500.0 2238600.0 True False 2125565.8259388176 2230248.371385508 1889440.6293324172 1614887.895806258 1862193.1364690356 2079141.8037378152 1867294.0787986466 2359287.695078653 2192151.9194902433 2218767.745604444 0.9579938369618601 1.0051743251648617 0.8515720643026067 0.7278309769039504 0.8392916023581959 0.937070501343262 0.8415906002320005 1.0633324284403314 0.9880042306514828 1.0 21.081327227484923 -7.259681007358818 24.997214796437262 1.0192512506001528 0.8785581212383288 0.41560448148534357 0.07443850807671135 168.37533733069003 2393684.8072439637 0.0413674667566199 0.022271752716378865 5.4994466413651656e-08 7.259681007358818 -0.140693129361824 ARVECQSHR ddPTM_KYSE-520_SHP099_60min_R1 2 ARVECQSHR 9 1 O14818;H0Y586;O14818-4;O14818-2 O14818 PSMA7 Proteasome subunit alpha type-7 0 ; 127.76 0.00068223 321850000.0 209048.0 186261.0 74497.0 66178.0 168106.0 174944.0 97430.0 130301.0 106964.0 127083.0 False True 197451.69071314344 177312.74197653902 79299.19581941435 72467.53722285878 181334.9858076992 173852.10960381816 107279.17522516722 129849.01624348214 87542.03394301079 125957.14348907775 1.5676101032750498 1.4077227941574788 0.629572834241757 0.5753348735567565 1.4396562257973364 1.3802481128741506 0.8517117191885971 1.030898388504197 0.6950144431514669 1.0 16.9425734193277 -4.601832949515327 7.178107210033734 0.9681506513061723 1.5284526049722973 0.383372560787993 0.2750012639333582 0.22118499891370896 16.419150940774657 0.07588690617147346 0.2040544355169149 2.5013072994203966e-05 4.601832949515327 0.560301953666125 ARVS(ph)GDDFSVPSK ddPTM_KYSE-520_SHP099_60min_R1 2 ARVSGDDFSVPSK 13 1 Q15361 Q15361 TTF1 Transcription termination factor 1 1 ARVS(0.999)GDDFS(0.001)VPSK;ARVS(0.969)GDDFS(0.031)VPSK 158.91 1.3565e-05 503450000.0 1057770.0 1043030.0 1018790.0 869320.0 1036930.0 964270.0 987970.0 1025400.0 1269540.0 1067890.0 True False 999093.3894877812 992921.2731800517 1084462.8335216334 951939.9114294127 1118530.491675358 958251.6332522052 1087843.6492580145 1021843.1267301601 1039023.5384990278 1058429.325405848 0.9439396334797179 0.9381082414731114 1.0245963594270246 0.8993892067988549 1.0567833532451159 0.9053524975649836 1.027790541272926 0.9654334986781861 0.9816654863569855 1.0 20.0134935086833 -1.2496614578074228 0.48402377487567005 0.9835319438152201 8.165603071456887e-13 0.07052390355126914 0.04876521351287353 218.99295379378245 3.132785349774951 0.02565338750045436 212.2307999500792 0.056277985363979995 1.2496614578074228 -0.9835319438144036 ARVS(ph)RQPR ddPTM_KYSE-520_SHP099_60min_R1 1 ARVSRQPR 8 2 A0A087WTR7;Q86UP0-3;Q86UP0-2;Q86UP0 A0A087WTR7 CDH24 Cadherin-24 1 ARVS(1)RQPR 60.102 0.034897000000000004 0.0 83574.0 80699.0 84775.0 84125.0 60561.0 69718.0 70467.0 73593.0 79610.0 81413.0 True False 78937.98361936146 76822.09890833143 90239.73214479595 92120.21470689644 65326.8061550455 69282.86410142093 77590.49205164581 73337.72305973538 65154.83080478565 80691.74415835549 0.9782659235181196 0.9520440995496395 1.1183267022671215 1.1416312247026519 0.8095847578513523 0.8586115571557739 0.9615666740252441 0.9088627817464444 0.8074534945845383 1.0 16.300133453658603 -5.765217705687047 24.999999129608067 0.8883639423243771 1.0457981891983483 0.496170883470363 0.07724905734508164 87.03941669094017 575912.9395940226 0.024820039616561096 0.02922490785486977 1.7170474397661539e-06 5.765217705687047 0.15743424687397123 ARVS(ph)SGYVPPPVATPFSSK ddPTM_KYSE-520_SHP099_60min_R1 3 ARVSSGYVPPPVATPFSSK 19 1 Q15942;Q15942-2;H7C3R3 Q15942 ZYX Zyxin 1 ARVS(0.703)S(0.157)GY(0.139)VPPPVATPFSSK;ARVS(0.998)S(0.002)GYVPPPVATPFSSK;ARVS(0.902)S(0.094)GY(0.004)VPPPVATPFSSK 204.05 2.7436999999999997e-13 1739530000.0 1643870.0 1611370.0 1381970.0 1258490.0 1159860.0 1478950.0 1293710.0 1329300.0 1837100.0 1621260.0 True False 1552681.2541264002 1533957.3664843207 1471053.9974301814 1378096.5112211837 1251134.383299334 1469719.324461354 1424490.8321928682 1324688.9685609527 1503528.949522317 1606896.8977211942 0.9662606582465375 0.9546084559996898 0.9154625909828706 0.8576135240384858 0.7786027747477878 0.9146320006875505 0.8864855201432006 0.8243770776081203 0.9356723207659013 1.0 20.615845934604664 -4.934969695872491 2.9794799919627835 0.8751693210025945 0.9615377454713976 0.19653737316194697 0.05768828984978147 0.3408544009788436 6.095147485587286 0.015370037187868451 0.03678881352309847 1.1615296600344774e-05 4.934969695872491 0.0863684244688031 AS(ph)ADFGAAGSPRPLGR ddPTM_KYSE-520_SHP099_60min_R1 1 ASADFGAAGSPRPLGR 16 1 Q86UD0 Q86UD0 SAPCD2 Suppressor APC domain-containing protein 2 1 AS(1)ADFGAAGSPRPLGR 83.42299999999999 0.0029027 283930000.0 455730.0 458090.0 391520.0 327800.0 412070.0 381660.0 384310.0 451010.0 640620.0 467890.0 True False 430449.7484247685 436082.6687928922 416758.0056541485 358954.0134433359 444497.5646424202 379277.9183704114 423159.8053041574 449445.5515765257 524299.5567160128 463744.85861291114 0.9282038181776714 0.9403504118562991 0.8986795172256936 0.7740334081912822 0.9584959410050157 0.8178590259843624 0.9124840900012431 0.9691655728989523 1.1305776160715277 1.0 18.822971761572358 -7.469225002520724 3.0475426090552222 1.0642553717410261 0.8877333942398248 0.5640968119908771 0.0611158558317922 0.1830396058303451 3.2846278731324086 0.04308115935656206 0.01617952907269621 3.3944936257126225e-08 7.469225002520724 -0.17652197750120135 AS(ph)APERTPS(ph)PAPK ddPTM_KYSE-520_SHP099_60min_R1 1 ASAPERTPSPAPK 13 1 Q63ZY6;Q96P11-2;Q3KNT7-3;Q63ZY6-6 Q63ZY6 NSUN5P2;NSUN5 Putative methyltransferase NSUN5C;Probable 28S rRNA (cytosine-C(5))-methyltransferase 2 AS(0.585)APERT(0.417)PS(0.998)PAPK 125.67 0.00022044 617300000.0 755050.0 695900.0 656990.0 727710.0 747990.0 648340.0 720570.0 687950.0 739740.0 714840.0 True False 713165.8713451418 662467.9194328049 699340.6266211667 796871.3396060104 806852.5575190707 644293.4695704886 793412.2476855051 685563.6620187374 605421.8633278746 708507.073737105 1.0065755131892522 0.9350194853221986 0.9870623068481325 1.1247189606771566 1.1388066364154006 0.9093677303348375 1.1198367343046522 0.9676172439643407 0.8545036256794231 1.0 19.43442273152435 -9.641898984600893 6.5045660599339 0.9999999998791921 1.009204523766975 0.0 0.09165677453142554 0.0 0.0 0.09105700449493873 0.02208456749911615 2.280872533393436e-10 9.641898984600893 0.009204523887782812 AS(ph)DGGANIQLHAQQLLK ddPTM_KYSE-520_SHP099_60min_R1 3 ASDGGANIQLHAQQLLK 17 0 H0Y4E8;Q9Y2K2-8;Q9Y2K2-7;Q9Y2K2;H7C3X8 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 AS(1)DGGANIQLHAQQLLK;AS(1)DGGANIQLHAQQLLK;AS(1)DGGANIQLHAQQLLK 205.84 1.9227e-13 3941610000.0 2405660.0 2164700.0 1878210.0 2090310.0 2027680.0 2323120.0 2323520.0 2359470.0 2300010.0 2466180.0 True False 2272213.244235682 2060704.562719056 1999282.4218422552 2288972.433925381 2187246.88007897 2308620.5463623893 2558404.0769699314 2351285.549274438 1882386.1625337868 2444331.563859005 0.9295847084870965 0.8430544338533618 0.8179260340139267 0.9364410572482442 0.8948241361437231 0.94447929262004 1.0466681831538573 0.9619339634768411 0.7701026286147354 1.0 21.221008563601448 -5.593005181532919 1.9616116696953516 0.9435998452961338 0.8637707293741985 0.1508434830852179 0.07389526947003491 0.6164346725689531 4.818343140059069 0.025096073580110262 0.03727074327771398 2.5526708467667343e-06 5.593005181532919 -0.07982911592193531 AS(ph)DGQLQAK ddPTM_KYSE-520_SHP099_60min_R1 4 ASDGQLQAK 9 0 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 AS(1)DGQLQAK;AS(1)DGQLQAK;AS(1)DGQLQAK;AS(1)DGQLQAK 138.42 0.00044105 4266810000.0 10292000.0 9264800.0 9107900.0 9211900.0 9638100.0 9300900.0 9223800.0 9650800.0 10044600.0 9475400.0 True False 9721082.243406644 8819705.101251692 9695009.80715526 10087396.20634127 10396563.636712467 9242849.633106312 10156231.71961302 9617323.627313655 8220753.843760203 9391455.327749658 1.0350985980504013 0.9391201675837639 1.032322411044076 1.0741036244441542 1.1070237012141173 0.9841764998653351 1.0814332140412377 1.0240504045093635 0.8753439756530286 1.0 23.162917308826145 -7.637670225536356 7.996948457907271 0.9385548747748647 1.0357253189181026 0.34776078963619717 0.053325004913618086 0.2592872591558447 16.870122762111695 0.03686297058875683 0.013761421606710261 2.3031900435460004e-08 7.637670225536356 0.09717044414323794 AS(ph)DKDITVSK ddPTM_KYSE-520_SHP099_60min_R1 9 ASDKDITVSK 10 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 AS(1)DKDITVSK;AS(1)DKDITVSK;AS(1)DKDITVSK;AS(1)DKDITVSK;AS(1)DKDITVSK;AS(1)DKDITVSK;AS(1)DKDITVSK;AS(1)DKDITVSK;AS(1)DKDITVSK 211.75 3.4365999999999995e-09 14930680000.0 23417977.0 19522865.0 17412568.0 18421394.0 19668511.0 19114501.0 19454620.0 18518823.0 20830977.0 17615088.0 True False 22118935.13323021 18584957.260982227 18535009.994373843 20172157.747165926 21216310.917180665 18995200.30909486 21421282.848394148 18454585.525338802 17048596.682996858 17459032.0246511 1.2669050095102414 1.0644895567372457 1.0616287299435345 1.15539955014024 1.2152054528123046 1.0879870248404828 1.2269456186430376 1.0570222621324048 0.9764915179103439 1.0 24.057470238531266 -7.500244650562876 5.334389071698585 0.9949205764607728 1.1470710195790088 0.511388346739383 0.06595791345785552 0.1475142087146106 12.776342482311659 0.040777791533305206 0.01724766003291945 3.16049675994472e-08 7.500244650562876 0.152150443118236 AS(ph)DLEDEESAAR ddPTM_KYSE-520_SHP099_60min_R1 3 ASDLEDEESAAR 12 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 AS(1)DLEDEESAAR;AS(1)DLEDEESAAR;AS(1)DLEDEESAAR 234.52 1.4661e-17 2308560000.0 4692170.0 4005040.0 3616610.0 3927340.0 4090670.0 4186030.0 4214350.0 4531180.0 4508580.0 4187320.0 True False 4431885.976491002 3812631.866712397 3849742.4673806014 4300593.212802171 4412582.456271521 4159903.434041009 4640377.626092408 4515462.394165364 3689935.524052764 4150223.6024856614 1.0678667948967007 0.918656976561197 0.9275988081882877 1.0362316888724863 1.0632155948486068 1.0023323638633712 1.1181030398731244 1.0880046056942458 0.8890931856883034 1.0 21.98475763626733 -5.285201619251278 22.451890582138283 1.0359415698426164 0.9661024848910479 0.11473741137585391 0.06948412268260731 367.7919932480144 347509.347437614 0.01946904317371265 0.028908517458084784 5.185592442528372e-06 5.285201619251278 -0.06983908495156854 AS(ph)DPGLPAEEPK ddPTM_KYSE-520_SHP099_60min_R1 8 ASDPGLPAEEPK 12 0 F8VPD4;P27708 F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK;AS(1)DPGLPAEEPK 196.11 4.4278999999999996e-09 33409300000.0 27460300.0 23621800.0 20483800.0 24168400.0 25767100.0 26214400.0 26973700.0 27652200.0 27326500.0 24639300.0 True False 25937022.418249108 22486973.270955328 21804218.523238786 26465357.469505586 27794824.175255887 26050786.20586203 29700464.833943304 27556280.972271968 22364696.44500657 24421014.97108534 1.0620779868878805 0.9208042048039391 0.892846531933875 1.0837124296775036 1.1381518830468416 1.0667364250300961 1.216184702769679 1.1283839351025666 0.9157971718819441 1.0 24.54161982617985 -5.314615385932296 9.459394091651573 1.0916507035861067 0.9548783903215142 0.27675394220504024 0.08690583122523009 0.5684304633709014 98.51891228291943 0.02465349741007995 0.036649513219852735 4.846013437615308e-06 5.314615385932296 -0.1367723132645925 AS(ph)DPGLPAEEPKEK ddPTM_KYSE-520_SHP099_60min_R1 2 ASDPGLPAEEPKEK 14 1 F8VPD4;P27708 F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 AS(1)DPGLPAEEPKEK;AS(1)DPGLPAEEPKEK 152.71 1.2714e-06 1824960000.0 2814700.0 3172400.0 3106100.0 2240930.0 2788000.0 2577500.0 1946660.0 2067590.0 3913500.0 2295870.0 True False 2658562.9800346554 3019993.1421305225 3306324.175935714 2453907.31343983 3007399.7384499386 2561412.866424921 2143447.390370766 2060418.0128691348 3202907.0513067283 2275530.3779598293 1.1683267363884817 1.3271601079824544 1.4529905678077841 1.078389169051625 1.321625836147387 1.1256333429929444 0.9419550761139542 0.9054671529880618 1.4075430863631697 1.0 21.117771415502595 -6.430852291903394 4.613380071356092 1.0529486336070146 1.271348120774179 0.2772743111202701 0.15798781139895576 0.29296549597889765 10.59564007805123 0.05717950974598787 0.049424833382415045 3.708068156155792e-07 6.430852291903394 0.2183994871671644 AS(ph)DTSLTQGIVAFR ddPTM_KYSE-520_SHP099_60min_R1 7 ASDTSLTQGIVAFR 14 0 Q9H0K1 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 1 AS(0.979)DT(0.02)SLTQGIVAFR;AS(0.965)DT(0.035)SLTQGIVAFR;AS(0.995)DT(0.003)S(0.001)LT(0.001)QGIVAFR;AS(0.99)DT(0.007)S(0.002)LT(0.001)QGIVAFR;AS(0.927)DT(0.073)SLTQGIVAFR;AS(0.985)DT(0.014)S(0.001)LTQGIVAFR;AS(0.991)DT(0.009)SLTQGIVAFR 273.84 4.412800000000001e-25 2494542000.0 1199283.0 1140493.0 1026664.0 1283576.0 1069251.0 1053877.0 1056897.0 1091927.0 1129526.0 1136252.0 True False 1132756.3812786094 1085702.0043651073 1092844.4041604798 1405566.677118803 1153394.9704940235 1047299.362727177 1163738.463080709 1088139.3600946788 924432.5514333167 1126185.691270678 1.0058344641197825 0.9640523874354211 0.9703945029948132 1.2480771936756705 1.0241605620052276 0.9299526453275272 1.0333450976167706 0.9662166448473772 0.8208526876151988 1.0 20.103013295310795 -7.111917206800808 1.3328965455411106 0.915668651854708 1.0347711450501467 0.1872920037546255 0.09168985122491781 0.7986776098889474 2.6129554044743184 0.07478437113372476 0.03193727249286789 7.72827901717196e-08 7.111917206800808 0.11910249319543864 AS(ph)EHKDQLSR ddPTM_KYSE-520_SHP099_60min_R1 1 ASEHKDQLSR 10 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 AS(0.989)EHKDQLS(0.011)R 99.927 0.0014130999999999998 724940000.0 410250.0 383360.0 306900.0 322240.0 316910.0 310170.0 345470.0 361830.0 402090.0 306130.0 True False 387492.61468690063 364942.8101649084 326683.2650573617 352865.5927150113 341849.0140287559 308234.1139782805 380393.479062286 360574.8961817566 329080.59186403995 303417.926365536 1.2770920272524622 1.202772738368964 1.0766775350768079 1.1629688362246084 1.126660570532411 1.0158731149159008 1.2536948084076462 1.188377036587357 1.0845786068275591 1.0 18.21094679902853 -13.99999999989511 0.02095799428568538 1.5324187826039e-05 1.9333358695316254 0.3216436067980277 0.07402677937493331 4429.956860097653 7.009342823983389 442.14980482476176 234.7267506649847 1.0000000002415189e-14 13.99999999989511 1.9333205453437994 AS(ph)ES(ph)SSEEKDDYEIFVK ddPTM_KYSE-520_SHP099_60min_R1 1 ASESSSEEKDDYEIFVK 17 1 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 2 AS(0.614)ES(0.656)S(0.607)S(0.122)EEKDDYEIFVK 72.634 0.010196 413190000.0 400350.0 375020.0 351930.0 345660.0 337980.0 322810.0 347290.0 361780.0 413780.0 307860.0 True False 378141.78742206143 357003.4762835035 374615.97090790933 378511.4224735313 364577.10315685434 320795.2230497101 382397.4624237737 360525.0696200864 338647.98254495894 305132.599911456 1.2392703615798226 1.1699945413472685 1.227715331028596 1.2404817531242762 1.1948153139410476 1.0513305465977714 1.2532173308743104 1.181535731431857 1.1098387476239133 1.0 18.2190767979722 -13.999999999976772 0.15003229461893244 0.3093194511259989 1.2458695057296536 0.5572033971366825 0.05457813413261779 105.86944174993586 0.9421612710039229 21.603306917736383 0.2838111618825546 1.0000000000534837e-14 13.999999999976772 0.9365500546036547 AS(ph)ETPPPVAQPKPEAPHPGLETTLQER ddPTM_KYSE-520_SHP099_60min_R1 1 ASETPPPVAQPKPEAPHPGLETTLQER 27 1 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 AS(0.554)ET(0.446)PPPVAQPKPEAPHPGLETTLQER 76.47800000000001 0.011319 1895300000.0 128120.0 131100.0 105680.0 97055.0 95546.0 97373.0 82379.0 111410.0 169430.0 124120.0 True False 121012.92819911189 124801.7592148881 112492.30189397838 106279.07801935026 103064.92661762491 96765.2589883197 90706.67326156271 111023.54471328949 138665.78298272623 123020.39336389875 0.9836818505461228 1.0144802483741049 0.9144199495543971 0.8639143081340418 0.8377873277705684 0.7865790081005886 0.737330378982362 0.9024808137694524 1.1271772036409269 1.0 16.908537968588345 -10.531482374883732 6.153320134474559 1.0001324560319926 0.8988395676853903 0.05673364290370553 0.1079814169124998 0.00021265063114375335 1.6191126128237765e-05 0.11331022510455156 0.02744592539007995 2.9411530531101726e-11 10.531482374883732 -0.10129288834660233 AS(ph)FAEK ddPTM_KYSE-520_SHP099_60min_R1 5 ASFAEK 6 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 AS(1)FAEK;AS(1)FAEK;AS(1)FAEK;AS(1)FAEK;AS(1)FAEK 135.0 0.006972 5500940000.0 8826510.0 7866190.0 7459370.0 8399610.0 8389680.0 7837740.0 8368700.0 8707800.0 9304460.0 8251170.0 True False 8336885.895088546 7488286.425008089 7940212.925613999 9197906.408965174 9049900.085250603 7788821.757397962 9214689.866641251 8677594.674215788 7615004.610349144 8178071.05311313 1.0194195967415765 0.9156543610803599 0.9709151307252845 1.1247036555721566 1.106605705242142 0.9524032876228199 1.1267559069609103 1.0610808609827993 0.9311492356685206 1.0 22.963329166735853 -5.04316987780392 21.132930447481087 1.0480986417717666 0.9614739755316881 0.19842513583537502 0.06800903163021432 106.0252294654219 51902.43294527399 0.018322134566112376 0.03174425434761116 9.053783855375076e-06 5.04316987780392 -0.08662466624007847 AS(ph)FITANGVSLLK ddPTM_KYSE-520_SHP099_60min_R1 1 ASFITANGVSLLK 13 0 Q9H3U1;A0A1W2PNX8;Q9H3U1-2 Q9H3U1 UNC45A Protein unc-45 homolog A 1 AS(1)FITANGVSLLK 92.575 0.0041792 0.0 127220.0 114190.0 76342.0 74374.0 88231.0 104630.0 85999.0 100190.0 103550.0 110510.0 True False 120162.85299321736 108704.14099731573 81263.12747151885 81442.48259864144 95174.27773428138 103976.9653594722 94692.61818935795 99842.46427452184 84747.9302830744 109530.96737547888 1.0970673944775062 0.9924512090235746 0.7419191980012726 0.7435566812758223 0.868925747802611 0.9492928607398562 0.8645282741340706 0.91154553517505 0.7737348835106449 1.0 16.7409792909556 -4.558182057478018 6.082684523256081 0.853631708663229 1.0734704272999231 0.48190868022883515 0.08119615603284533 0.12772176146547504 13.168229672616606 0.02131702831242781 0.06036528005591936 2.7657819787143713e-05 4.558182057478018 0.21983871863669413 AS(ph)FYENIIK ddPTM_KYSE-520_SHP099_60min_R1 1 ASFYENIIK 9 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 AS(1)FYENIIK 113.77 0.00088038 67078000.0 116520.0 116970.0 104810.0 106720.0 117900.0 111600.0 114880.0 113160.0 139980.0 112050.0 True False 110056.40332313855 111350.58562445057 111566.22030192925 116862.63671346196 127178.05924076308 110903.46300408192 126493.19152075544 112767.47437174244 114563.16060864061 111057.32417358081 0.9909873494801853 1.0026406313410847 1.0045822833580345 1.0522731173570106 1.1451568835026658 0.9986145788164461 1.1389900887855773 1.0153988060750383 1.0315678093376375 1.0 16.76094501545738 -5.267197894857988 4.745363800978226 1.060498181657174 0.9989670999753429 0.20702722338893442 0.048782227489587895 0.2697240907290443 17.575536764195103 0.013274427774601617 0.02164864374379384 5.405079736896563e-06 5.267197894857988 -0.06153108168183097 AS(ph)GEMASAQYITAALR ddPTM_KYSE-520_SHP099_60min_R1 41 ASGEMASAQYITAALR 16 0 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 1 AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(0.999)GEMAS(0.001)AQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(0.998)GEMAS(0.002)AQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR;AS(1)GEMASAQYITAALR 322.39 2.0073e-47 107650211000.0 26323374.9 22745600.6 22604074.3 23712073.1 23419674.4 25749669.2 26133859.3 27303686.0 28434269.3 28380749.700000003 True False 24863164.819950115 21652867.805333447 24061169.09717565 25965661.398129243 25262669.535560522 25588955.963167995 28775724.83993193 27208975.885994203 23271322.764718134 28129318.33754716 0.8838879251034901 0.7697615543150609 0.8553768992353674 0.923081785578506 0.8980903565601083 0.9096898707641885 1.0229798139659128 0.9672817364249997 0.827297785373471 1.0 24.745571256218717 -5.359069751120808 1.4701258939051784 0.9426650066062802 0.822499187367551 0.38507091755464307 0.057864207419117714 0.4317295742876789 1.8331465510771592 0.019695508605629335 0.040802060178096386 4.374518412982963e-06 5.359069751120808 -0.12016581923872915 AS(ph)GQAFELILS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 10 ASGQAFELILSPR 13 0 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 2 AS(1)GQAFELILS(1)PR;AS(1)GQAFELILS(1)PR;AS(1)GQAFELILS(1)PR;AS(1)GQAFELILS(1)PR;AS(1)GQAFELILS(1)PR;AS(1)GQAFELILS(1)PR;AS(1)GQAFELILS(1)PR;AS(1)GQAFELILS(1)PR;AS(1)GQAFELILS(1)PR;AS(1)GQAFELILS(1)PR 162.65 1.0633e-06 7288309000.0 2239720.0 2373954.0 2420588.0 2444277.0 2580531.0 3616148.0 3943593.0 4892130.0 5577360.0 4880660.0 True False 2115478.266828874 2259905.686462397 2576622.9755577394 2676580.3511813204 2783604.1084870724 3593578.2789900056 4342249.866198735 4875160.342861725 4564652.017804038 4837421.149496023 0.4373152970254143 0.4671715810185022 0.5326439224391657 0.5533072826334698 0.5754314173735063 0.7428706676416619 0.8976373427091673 1.0078015108049119 0.9436126970833617 1.0 22.20580671468289 -6.486032486791185 1.0779555109064 1.0012488265485444 0.4810020832950782 0.979844641900071 0.030802946023988944 0.06641283024411053 0.15886332100193928 0.01978018368653498 0.014466882759680699 3.2656340314011454e-07 6.486032486791185 -0.5202467432534662 down AS(ph)GQAFELILSPR ddPTM_KYSE-520_SHP099_60min_R1 12 ASGQAFELILSPR 13 0 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 AS(1)GQAFELILSPR;AS(1)GQAFELILSPR;AS(1)GQAFELILSPR;AS(1)GQAFELILSPR;AS(0.953)GQAFELILS(0.047)PR;AS(1)GQAFELILSPR;AS(1)GQAFELILSPR;AS(1)GQAFELILSPR;AS(0.969)GQAFELILS(0.031)PR;AS(0.83)GQAFELILS(0.17)PR;AS(1)GQAFELILSPR;AS(1)GQAFELILSPR 210.91 3.7191000000000005e-11 31617902000.0 5117811.0 5768046.0 5394698.0 5934645.0 6373404.0 6633158.0 5934814.0 6429103.0 6894097.0 6598434.0 True False 4833915.821726706 5490940.4121464435 5742448.864901987 6498671.876483914 6874954.635091755 6591758.000476965 6534762.917322948 6406801.942256925 5642302.770842603 6539977.008263964 0.7391334580562796 0.8395962868383252 0.8780533719989818 0.9936842084111525 1.0512200006826493 1.0079176107419903 0.9992027355853961 0.9796367684720055 0.8627404597467158 1.0 22.640854133163455 -4.799394129165577 1.5714267918493041 0.988240623493968 0.7479731232401319 0.7342072483142809 0.04851033502258247 0.2506736309274584 1.0889673347382471 0.015285720240982384 0.06855447896468417 1.5871057710537545e-05 4.799394129165577 -0.24026750025383614 AS(ph)GVAVSDGVIK ddPTM_KYSE-520_SHP099_60min_R1 4 ASGVAVSDGVIK 12 0 E9PP50;P23528;E9PS23 E9PP50 CFL1 Cofilin-1 1 AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK;AS(1)GVAVSDGVIK 265.77 1.1944000000000002e-21 13241000000.0 11314500.0 10739900.0 10065200.0 9553400.0 10190400.0 10329100.0 10093300.0 10082300.0 11690100.0 10614600.0 True False 10686862.13010343 10223939.083081437 10714018.896889417 10461352.263665542 10992326.504555322 10264632.255514905 11113629.265115255 10047326.854526509 9567472.52343956 10520562.90203384 1.0158070656121871 0.9718053281260208 1.0183883692020108 0.9943719134689218 1.0448420495095638 0.9756732934442645 1.0563721132228356 0.9550179917259137 0.9094069027038442 1.0 23.326708562211216 -7.422513501297938 8.694797201450404 0.9473022091493551 1.0090399552523703 0.38047980515542035 0.032534261082331734 0.2947057546608748 23.090825630420888 0.01658832209930234 0.007924901632472052 3.7799538604116444e-08 7.422513501297938 0.06173774610301519 AS(ph)HSSERPPPR ddPTM_KYSE-520_SHP099_60min_R1 5 ASHSSERPPPR 11 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 AS(0.999)HS(0.001)SERPPPR;AS(0.739)HS(0.253)S(0.008)ERPPPR;AS(0.973)HS(0.027)SERPPPR;AS(0.993)HS(0.006)S(0.001)ERPPPR;AS(0.937)HS(0.052)S(0.011)ERPPPR 102.33 0.00085187 473157000.0 174214.0 180508.0 216913.0 158161.0 162193.0 182252.0 181121.0 162766.0 276137.0 195254.0 True False 164550.00213300114 171836.12473196807 230895.55905307096 173192.5738871612 174956.66634806697 181114.4976650531 199430.4782506159 162201.40273586998 225997.48164729422 193524.20146531356 0.8502812613981738 0.8879309328284051 1.1931094783225635 0.894940129326427 0.9040557461203396 0.9358751840529633 1.0305195770894886 0.8381453146827337 1.1677995823576672 1.0 17.562154470525897 -7.7682735529641445 24.999987938456965 1.0838997467208924 0.9483667961030738 0.2232738268773714 0.10541462292357326 272.62881543366217 997254.4493983027 0.092646222869383 0.026043560153448494 1.7050081019435422e-08 7.7682735529641445 -0.13553295061781856 AS(ph)HTLLPSHR ddPTM_KYSE-520_SHP099_60min_R1 2 ASHTLLPSHR 10 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AS(0.948)HT(0.052)LLPSHR;AS(0.632)HT(0.368)LLPSHR 124.21 0.00030206 744650000.0 221217.0 202853.0 177080.0 282540.0 225990.0 250920.0 287580.0 282770.0 336520.0 250030.0 True False 208945.65202484332 193107.63739143955 188494.86013801754 309392.51665125176 243774.1272927912 249353.91520595207 316651.3929103314 281789.1368690142 275416.45097885246 247814.92872039668 0.8431519969508835 0.7792413410627009 0.7606275421392854 1.2484821566191096 0.9836942776269761 1.0062102250800709 1.2777736779030013 1.1370950827056499 1.1113795783045737 1.0 17.918903574514772 -5.249639246651777 24.81238291191976 1.1124449277482176 0.792830365699745 0.6964848999412042 0.09524120417257431 378.0697522931473 794973.3304662316 0.02629811737448779 0.04506792074868375 5.628086366685825e-06 5.249639246651777 -0.3196145620484726 AS(ph)KDYSGFR ddPTM_KYSE-520_SHP099_60min_R1 2 ASKDYSGFR 9 1 X6RLN4;Q71RC2-2;Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4 X6RLN4 LARP4 La-related protein 4 1 AS(0.998)KDYS(0.002)GFR;AS(1)KDYSGFR 82.505 0.006492100000000001 1187900000.0 2372290.0 2092850.0 2038280.0 1564130.0 1769460.0 1980280.0 1692370.0 1549130.0 2080680.0 1883240.0 True False 2240694.344657128 1992306.3445681054 2169670.790163307 1712784.4449271678 1908706.4351497975 1967920.3379724303 1863451.2755395276 1543756.4295996598 1702880.9616744285 1866555.95873855 1.2004431660176034 1.0673702737069504 1.1623925765555976 0.9176175173899938 1.022581951649461 1.0543055667628545 0.9983366782096795 0.8270614242087638 0.9123117652605841 1.0 20.83194733014005 -4.2369329359197625 0.40604426658948556 0.9229880065252467 1.3807761148461681 0.5441288160341266 0.07281182271904639 4.556650319080532 0.5831136610685335 0.061522932692052605 1.0279204009179168 5.795181791504004e-05 4.2369329359197625 0.4577881083209214 AS(ph)LADALPLHIAPR ddPTM_KYSE-520_SHP099_60min_R1 4 ASLADALPLHIAPR 14 0 H3BRB6;Q8ND25;Q8ND25-2 H3BRB6 ZNRF1 E3 ubiquitin-protein ligase ZNRF1 1 AS(1)LADALPLHIAPR;AS(1)LADALPLHIAPR;AS(1)LADALPLHIAPR;AS(1)LADALPLHIAPR 166.35 2.0823e-08 452024000.0 237754.0 220639.0 230326.0 235147.0 215981.0 175974.0 203978.0 251040.0 280710.0 266864.0 True False 224565.31166915124 210039.17125410898 245173.18249463008 257495.30018047654 232977.47593621098 174875.68099175903 224598.0868734391 250169.20083317644 229740.14012324298 264499.7925770502 0.8490188573729567 0.7940995688793345 0.9269314735784142 0.9735179663910957 0.8808229060079258 0.6611562122144833 0.8491427712859642 0.9458200265329161 0.8685834415401987 1.0 18.012907065403038 -8.171749863248571 1.1436172387703047 0.9968788809028096 0.8531020107425901 0.21077196961354472 0.08273712932970267 1.2643832779605262 3.38762928116585 0.08598924683835585 0.027032397456445905 6.733643763417204e-09 8.171749863248571 -0.14377687016021956 AS(ph)LEDAPVDDLTR ddPTM_KYSE-520_SHP099_60min_R1 6 ASLEDAPVDDLTR 13 0 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR;AS(1)LEDAPVDDLTR 253.16 1.6427e-16 12460580000.0 11708500.0 10510300.0 9652100.0 9818600.0 10939500.0 11184900.0 11175500.0 11897000.0 11620400.0 11759300.0 True False 11059006.164683897 10005369.411718074 10274289.809906028 10751756.791930264 11800376.412759358 11115090.890271997 12305228.60236945 11855732.083780678 9510428.286445545 11655121.750596967 0.9488537658662779 0.8584525864095419 0.8815257386204298 0.9224920187023844 1.0124627322880562 0.95366578986639 1.0557786409858125 1.01721220399722 0.8159870389992647 1.0 23.474460739297367 -5.578743635692749 5.229685942720618 0.9793420325854135 0.893702922389659 0.24502648802846072 0.06372959184184816 0.26306375128511167 15.05419463015418 0.018957279302257695 0.024919401551201537 2.6378880733208595e-06 5.578743635692749 -0.08563911019575454 AS(ph)LEDAPVDDLTRK ddPTM_KYSE-520_SHP099_60min_R1 1 ASLEDAPVDDLTRK 14 1 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 AS(1)LEDAPVDDLTRK 160.25 6.8747000000000004e-06 0.0 221310.0 241210.0 189750.0 194320.0 193200.0 205410.0 156690.0 185910.0 272450.0 205490.0 True False 209033.49312945266 229621.90953640864 201981.58861073424 212788.11437556145 208403.74084237043 204127.9599970294 172529.7543470333 185265.12160172022 222979.94790558788 203669.5184688008 1.02633665901986 1.1274240311594952 0.9917124080679499 1.0447715297572007 1.0232446288927366 1.0022509088825622 0.8471064086767719 0.9096359779045687 1.0948125648941678 1.0 17.635870554669605 -6.389685370892497 3.412823652296862 0.9528240674342552 1.045143280710349 0.21964623354819823 0.06821342826670754 0.3453485047590334 7.436673862658295 0.02600462049202697 0.02245133343281212 4.0767551557054106e-07 6.389685370892497 0.09231921327609371 AS(ph)LGS(ph)LEGEAEAEASSPK ddPTM_KYSE-520_SHP099_60min_R1 4 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 AS(1)LGS(1)LEGEAEAEASSPK;AS(1)LGS(0.947)LEGEAEAEAS(0.053)S(0.001)PK;AS(1)LGS(1)LEGEAEAEASSPK;AS(1)LGS(1)LEGEAEAEASSPK 241.13 1.3386e-23 753360000.0 2753730.0 3014510.0 2312740.0 2445560.0 2985300.0 2420420.0 2541850.0 2764260.0 3353560.0 2438900.0 True False 2600975.107475338 2869688.4147282415 2461822.920914833 2677985.2871155716 3220226.1259664996 2405313.2609707904 2798805.0040653967 2754671.427243137 2744638.0403680047 2417293.243435489 1.0759865872866952 1.1871494790800816 1.0184212972920315 1.1078446085877374 1.332161968644678 0.9950440508212101 1.15782601538558 1.1395685793289032 1.135417909193048 1.0 21.204961067329705 -9.5931472386252 10.333101602843268 0.9999994914319825 1.1290081613529095 0.15644769038812079 0.08892130169209937 0.0 0.0 0.08315399571559852 0.020167806325151246 2.551836008396549e-10 9.5931472386252 0.12900866992092697 AS(ph)LGSLEGEAEAEASSPK ddPTM_KYSE-520_SHP099_60min_R1 1 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 AS(0.5)LGS(0.5)LEGEAEAEASSPK 73.983 0.006692699999999999 66303000.0 107970.0 121650.0 95637.0 89784.0 99821.0 125940.0 92226.0 121520.0 144210.0 123130.0 True False 101980.68886714117 115805.75139962736 101801.91404461024 98317.044365456 107676.34479620197 125153.96174492911 101549.10411902152 121098.47548298123 118025.09923826311 122039.16399369048 0.8356390320111801 0.9489228507466226 0.834174134869307 0.8056187960328789 0.8823097542832146 1.0255229358290234 0.8321025873650829 0.9922919128587452 0.9671083886183053 1.0 16.89698467658919 -6.021090426321785 23.318213988854957 0.9546280642066918 0.8590056231458874 0.4225814719874973 0.05980750234615399 353.33665365748834 390659.4960854206 0.01944322030754792 0.019676431746699325 9.525977988887323e-07 6.021090426321785 -0.09562244106080442 AS(ph)LGTLPLGKPR ddPTM_KYSE-520_SHP099_60min_R1 1 ASLGTLPLGKPR 12 1 E7EPJ7;O75962-4;O75962;O75962-5 E7EPJ7 TRIO Triple functional domain protein 1 AS(0.85)LGT(0.15)LPLGKPR 143.55 4.699e-05 347740000.0 697980.0 606880.0 605980.0 666720.0 632680.0 670540.0 769410.0 815860.0 873190.0 757140.0 True False 659261.6580113654 577724.5738545486 645042.440402281 730084.868343322 682468.316543223 666354.911135817 847189.4715179708 813029.972083155 714640.7073286118 750432.3286460065 0.8785091377937583 0.7698556576006369 0.8595611033524118 0.9728856826578924 0.9094335231726891 0.8879613600044535 1.12893520065499 1.0834154407367982 0.9523053312722107 1.0 19.51736245497217 -5.866842691452711 0.785469596296776 1.0388170747160719 0.821310210248421 0.5318170303636585 0.06969726746933767 0.5307222876560994 0.7211606614379121 0.0427798893511128 0.06449891742767636 1.358805538996303e-06 5.866842691452711 -0.21750686446765088 AS(ph)LLAGK ddPTM_KYSE-520_SHP099_60min_R1 1 ASLLAGK 7 0 G3V4F2;A0A087X0W7;A0A087WT95;P49753-2;Q86TX2;P49753 G3V4F2 ACOT1;ACOT2 Acyl-coenzyme A thioesterase 2, mitochondrial;Acyl-coenzyme A thioesterase 1 1 AS(1)LLAGK 75.378 0.021254 435270000.0 777760.0 755280.0 686100.0 677400.0 776100.0 652850.0 634750.0 735330.0 840240.0 676380.0 True False 734616.102373879 718995.215101608 730327.1037988137 741779.892332263 837174.6545950494 648775.3209875888 698916.7245630184 732779.3118573132 687673.5967267066 670387.7994156776 1.095807684767211 1.072506414538417 1.0894098974285933 1.106493723452026 1.2487916028972281 0.9677612294750493 1.0425558537494375 1.093067792248035 1.025784773121014 1.0 19.35463636768251 -6.298787034758899 24.999014315939732 1.0326958038216534 1.1170800402993792 0.43633642918715587 0.05453463711861727 664.4878362277666 444779.2801272864 0.01991493379717944 0.017563957106426484 5.025889839614906e-07 6.298787034758899 0.08438423647772586 AS(ph)LSDIGFGK ddPTM_KYSE-520_SHP099_60min_R1 3 ASLSDIGFGK 10 0 Q07002;D6R9B0;A0A0A0MSJ6;Q07002-3;D6RA44 Q07002 CDK18 Cyclin-dependent kinase 18 1 AS(0.999)LS(0.001)DIGFGK;AS(1)LSDIGFGK;AS(0.819)LS(0.181)DIGFGK 199.82 1.4694999999999999e-06 269330000.0 514350.0 460052.0 362738.0 386490.0 381883.0 427213.0 381236.0 430674.0 483090.0 437193.0 True False 485817.9801686952 437950.4113678697 386120.67188132106 423221.89339754416 411935.01948295493 424546.60520038346 419775.05538480816 429180.09241406753 395373.03370787407 433319.8101510069 1.1211534039936768 1.010686336300316 0.8910755124414056 0.9766963879404827 0.9506489429583207 0.9797535105824816 0.968741898134132 0.9904465070833094 0.9124277830041769 1.0 18.72507266847403 -4.358465373436701 3.430984220912688 0.9594393450020912 1.127069235152734 0.6913808289165267 0.03279425032218653 0.13417001580823693 2.566385540918667 0.007949871949310336 0.04910779512591583 4.3806103665102795e-05 4.358465373436701 0.1676298901506429 AS(ph)LSDLSSLDDVEGMSVR ddPTM_KYSE-520_SHP099_60min_R1 5 ASLSDLSSLDDVEGMSVR 18 0 A0A087WTM5;H7BYJ1;Q969K3;Q969K3-2 A0A087WTM5 RNF34 E3 ubiquitin-protein ligase RNF34 1 AS(1)LSDLSSLDDVEGMSVR;AS(0.999)LS(0.001)DLSSLDDVEGMSVR;AS(1)LSDLSSLDDVEGMSVR;AS(1)LSDLSSLDDVEGMSVR;AS(0.995)LS(0.005)DLSSLDDVEGMSVR 241.68 1.2288e-23 1796150000.0 1671300.0 1543470.0 1426850.0 1451320.0 1557950.0 1559090.0 1630040.0 1881490.0 1949190.0 1893560.0 True False 1578589.6573460486 1469319.3844042965 1518827.034040718 1589253.0164447306 1680551.801477073 1549359.1409949304 1794820.3508573489 1874963.5503330678 1595266.23108127 1876784.5315673857 0.8411139535702048 0.782891887529147 0.8092708611426367 0.8467956708474548 0.89544205699179 0.8255391681542644 0.9563273357535695 0.9990297334597078 0.8499996692475894 1.0 20.839831597179305 -6.379601456798326 0.5890398312272599 0.9683440608301578 0.7989017719134257 0.5630587475720712 0.049262956897107364 0.6204379773996045 0.4627669375080492 0.041453623513466514 0.04245904386265207 4.1725211159808296e-07 6.379601456798326 -0.16944228891673208 AS(ph)LSDLTDLEDIEGLTVR ddPTM_KYSE-520_SHP099_60min_R1 8 ASLSDLTDLEDIEGLTVR 18 0 J3KSI3;J3KSU7;K7EN88;Q8WZ73-3;Q8WZ73-2;Q8WZ73 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 1 AS(0.998)LS(0.002)DLTDLEDIEGLTVR;AS(0.911)LS(0.089)DLTDLEDIEGLTVR;AS(1)LSDLTDLEDIEGLTVR;AS(1)LSDLTDLEDIEGLTVR;AS(0.998)LS(0.002)DLTDLEDIEGLTVR;AS(1)LSDLTDLEDIEGLTVR;AS(1)LSDLTDLEDIEGLTVR;AS(1)LSDLTDLEDIEGLTVR 306.26 1.8510000000000003e-47 505472800.0 467596.0 487229.0 417844.0 471777.0 488636.0 498267.0 469699.0 549894.0 678282.0 453973.0 True False 441657.51775048324 463821.78749436064 444778.8928140384 516614.54423507315 527088.873241472 495157.1308302414 517180.75874048844 547986.5460602251 555123.0868977708 449951.1524056495 0.9815676999362607 1.0308269798055907 0.9885048419946081 1.1481569532003861 1.17143576680137 1.1004686357238993 1.1494153442554775 1.2178800812720059 1.23374078259345 1.0 18.77940886252959 -5.266867651523594 22.365127509852755 1.154270549226508 1.003352539093878 0.5308909557038695 0.062338761735177724 75.21367704761134 309892.05657864764 0.017145061907390666 0.026365382230800788 5.409191394923943e-06 5.266867651523594 -0.15091801013262995 AS(ph)LSEIGFGK ddPTM_KYSE-520_SHP099_60min_R1 4 ASLSEIGFGK 10 0 Q00537;F5H6Z0;Q00537-2 Q00537 CDK17 Cyclin-dependent kinase 17 1 AS(0.999)LS(0.001)EIGFGK;AS(1)LSEIGFGK;AS(0.999)LS(0.001)EIGFGK;AS(0.773)LS(0.227)EIGFGK 199.8 1.4738999999999998e-06 1097901000.0 1660661.0 1409063.0 1182528.0 1214396.0 1265548.0 1293646.0 1309743.0 1359536.0 1440373.0 1581724.0 True False 1568540.8238843705 1341369.4984333187 1258755.6469916978 1329811.8307185285 1365139.4276168724 1285571.8754603807 1442144.604299869 1354820.0869340869 1178837.5720485041 1567711.1559226504 1.0005292224646012 0.855622857160749 0.8029257444754727 0.8482505375397994 0.8707850438261646 0.8200310820036097 0.9199045365286813 0.8642026190958181 0.7519481937696099 1.0 20.58022834286881 -3.2248278901695726 0.003782280225822529 1.7096603841913514 5.93237673567885e-07 0.016026844198625323 0.07551724833648282 489247.72978555376 218.25636091274814 47546.8328009715 51163.97943230772 0.0005958982497462111 3.2248278901695726 -1.7096597909536777 AS(ph)LTLEEK ddPTM_KYSE-520_SHP099_60min_R1 1 ASLTLEEK 8 0 Q6P3W7;A0A0U1RQQ9 Q6P3W7 SCYL2 SCY1-like protein 2 1 AS(0.997)LT(0.003)LEEK 74.944 0.030931999999999998 0.0 199100.0 154770.0 144160.0 151690.0 137290.0 156510.0 154350.0 139380.0 229150.0 154650.0 True False 188055.52610398995 147334.61688549374 153452.78426415543 166106.5719927386 148093.94192675484 155533.16303556334 169953.2043108339 138896.52331153667 187542.13640141464 153279.92131587933 1.2268764525031628 0.9612127643376492 1.0011277598970048 1.083681219084306 0.9661666097907421 1.0147001753415603 1.1087766933321572 0.9061625431376538 1.2235270920770354 1.0 17.225809200036252 -10.134872827383909 16.217563230548134 1.0000000000066336 1.0446624026583875 0.016587545691625127 0.10292147020555793 0.0 0.0 0.09173559054543401 0.022249148791013963 7.330391544689258e-11 10.134872827383909 0.04466240265175392 AS(ph)NPDLRR ddPTM_KYSE-520_SHP099_60min_R1 1 ASNPDLRR 8 1 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4;Q9UKE5-5;Q9UKE5-8;Q9UKE5-3;Q9UKE5-7 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 1 AS(1)NPDLRR 64.64 0.021852 0.0 257340.0 245580.0 241890.0 220480.0 221120.0 249370.0 202960.0 213390.0 273010.0 227790.0 True False 243064.83720542816 233781.9681769049 257482.61643768402 241434.35291027074 238520.8859993007 247813.58933089537 223477.17749871616 212649.7998956004 223438.2660220391 225771.95781793853 1.0765944520064556 1.0354783226242188 1.1404543723065768 1.0693726326498099 1.0564681650661099 1.0976278530158785 0.9898358487856456 0.9418787078379336 0.989663500204125 1.0 17.784506780612624 -6.832167893861815 5.47116108684393 0.9733096169011836 1.0785609726290875 0.7294597287353224 0.02950723961254729 0.1026414522411151 5.562967583872897 0.012372058964408447 0.008336101739208127 1.4717434312902654e-07 6.832167893861815 0.1052513557279039 AS(ph)PALVAK ddPTM_KYSE-520_SHP099_60min_R1 1 ASPALVAK 8 0 A6NMU3;Q92783-2;Q92783 A6NMU3 STAM Signal transducing adapter molecule 1 1 AS(1)PALVAK 65.933 0.053002999999999995 0.0 534190.0 528310.0 454870.0 511510.0 654000.0 417640.0 409590.0 461030.0 550760.0 393070.0 True False 504557.4158186363 502929.1945905234 484191.64801773225 560123.7566089114 705466.0792490166 415033.3538443075 450995.35441318067 459430.7945352104 450755.8675297543 389587.70560383244 1.295106104635949 1.2909267601528132 1.242830923699891 1.4377346834925415 1.8108016990823563 1.0653142998982377 1.1576221423983872 1.1792743660201657 1.1570074236072612 1.0 18.571588624792778 AS(ph)PAPGSGHPEGPGAHLDMNSLDR ddPTM_KYSE-520_SHP099_60min_R1 5 ASPAPGSGHPEGPGAHLDMNSLDR 24 0 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 1 AS(1)PAPGSGHPEGPGAHLDMNSLDR;AS(0.999)PAPGS(0.001)GHPEGPGAHLDMNSLDR;AS(0.999)PAPGS(0.001)GHPEGPGAHLDMNSLDR;AS(1)PAPGSGHPEGPGAHLDMNSLDR;AS(0.995)PAPGS(0.005)GHPEGPGAHLDMNSLDR 224.06 4.2087e-21 4682360000.0 430302.0 644326.0 613004.0 1151440.0 726209.0 538099.0 522059.0 523517.0 905038.0 517035.0 True False 406432.2902742294 613371.6118069572 652519.2186810784 1260872.5114069402 783357.5167360087 534740.5245433105 574833.8185248444 521701.0417167868 740705.9133513569 512454.4721471433 0.793109070882552 1.1969289861731114 1.2733213468643858 2.460457620994086 1.5286382680080892 1.0434888436094438 1.1217266113735658 1.018043689873368 1.4454082335311824 1.0 18.967064311786267 -6.25767310673281 24.151283913757833 1.1266107705881094 1.4826707852239058 0.13228478746440042 0.4117685150523354 448.5903658636802 2876597.953753097 0.1501182491431273 0.14454214677256658 5.524931441594298e-07 6.25767310673281 0.3560600146357964 AS(ph)PDMDGYPALK ddPTM_KYSE-520_SHP099_60min_R1 2 ASPDMDGYPALK 12 0 H0YAU4;H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03 H0YAU4 WWC1 Protein KIBRA 1 AS(1)PDMDGYPALK;AS(1)PDMDGYPALK 189.3 5.5825e-08 275430000.0 1154440.0 927830.0 773480.0 988930.0 963130.0 1004100.0 1049540.0 989270.0 1020130.0 917890.0 True False 1090400.9118809148 883255.6540987778 823339.7584117561 1082917.6098673549 1038922.8515399168 997833.0394480163 1155637.7457233097 985838.4532673532 834900.1073845745 909758.2087076133 1.1985612236793328 0.970868573259169 0.9050094305621911 1.1903356292939953 1.1419768918774502 1.0968112514923285 1.2702691051999284 1.0836268844090104 0.9177164870769554 1.0 19.795123637935287 -3.5865527506103247 6.1054564500089255 1.0759044735817582 42.241419294223824 0.10581514874417297 0.11259379443230484 37451.2278260134 2519.1197980813745 0.029106570236922046 21510681.20387566 0.00025908797068187155 3.5865527506103247 41.165514820642066 AS(ph)PDS(ph)SSCGERSPPPPPPPPSDEALLHCVLEGK ddPTM_KYSE-520_SHP099_60min_R1 1 ASPDSSSCGERSPPPPPPPPSDEALLHCVLEGK 33 1 Q9BRK4 Q9BRK4 LZTS2 Leucine zipper putative tumor suppressor 2 2 AS(0.841)PDS(0.329)S(0.311)S(0.293)CGERS(0.226)PPPPPPPPSDEALLHCVLEGK 66.72 0.033589 133470000.0 53050.0 52137.0 49765.0 52110.0 55911.0 56508.0 51712.0 49787.0 72508.0 56662.0 True False 50107.21074744683 49632.26026076753 52972.931526815286 57062.51873255722 60310.877609926305 56155.3126114217 56939.553620484956 49614.30051737316 59342.37497793486 56160.01876236895 0.8922221155136452 0.8837650227785275 0.9432498901213112 1.0160701507954804 1.073911279572768 0.9999162010438928 1.0138806018105953 0.8834452268847555 1.0566658680979342 1.0 15.777255797178606 -5.007400445344711 3.1197990241310456 1.0039411944080416 0.8885874078330233 0.5017463839241358 0.047585403708373365 0.21399050661560262 4.272450191355618 0.013655002517850087 0.029718548231353482 9.831042071628505e-06 5.007400445344711 -0.11535378657501838 AS(ph)PDSSSCGER ddPTM_KYSE-520_SHP099_60min_R1 1 ASPDSSSCGER 11 0 Q9BRK4 Q9BRK4 LZTS2 Leucine zipper putative tumor suppressor 2 1 AS(0.999)PDSSSCGER 93.345 0.0056064999999999995 30808000.0 112120.0 95459.0 93064.0 111160.0 116760.0 108110.0 97722.0 108870.0 109140.0 102120.0 True False 105900.48009432109 90873.00635311972 99063.05434766469 121724.61297852737 125948.34772647594 107435.2453886316 107600.69343481265 108492.35538044915 89322.92719550687 101215.29624815777 1.0462892864995057 0.8978189040747259 0.9787360015701949 1.2026306051615483 1.2443608070629772 1.0614526595389682 1.063087274585447 1.0718968318232218 0.8825042311441403 1.0 16.627067809466745 -7.744039397082591 24.08724130697057 0.9412521681858053 1.0715634870726305 0.22293362865698862 0.09672498926943861 229.45249673212845 317641.08808673307 0.07393758085489495 0.027782083642391046 1.8028541872801584e-08 7.744039397082591 0.13031131888682523 AS(ph)PDSSSCGERS(ph)PPPPPPPPSDEALLHCVLEGK ddPTM_KYSE-520_SHP099_60min_R1 5 ASPDSSSCGERSPPPPPPPPSDEALLHCVLEGK 33 1 Q9BRK4 Q9BRK4 LZTS2 Leucine zipper putative tumor suppressor 2 2 AS(1)PDS(0.094)S(0.082)S(0.071)CGERS(0.753)PPPPPPPPSDEALLHCVLEGK;AS(1)PDS(0.242)S(0.21)S(0.183)CGERS(0.365)PPPPPPPPSDEALLHCVLEGK;AS(1)PDS(0.07)S(0.046)S(0.035)CGERS(0.849)PPPPPPPPSDEALLHCVLEGK;AS(0.601)PDS(0.122)S(0.136)S(0.195)CGERS(0.947)PPPPPPPPSDEALLHCVLEGK;AS(0.999)PDS(0.06)S(0.051)S(0.045)CGERS(0.845)PPPPPPPPSDEALLHCVLEGK 233.83 8.472799999999999e-31 854900000.0 376975.0 401499.0 338209.0 361545.0 391266.0 370197.0 312617.0 363401.0 511394.0 364239.0 True False 356063.4452689689 382210.3853777146 360010.4932935332 395906.1280975324 422056.40820098814 367886.4632053952 344219.3772079038 362140.4467494308 418537.7407936505 361012.1258336538 0.9862922040270604 1.0587189682205536 0.9972254878203672 1.0966560394150222 1.1690920553606616 1.019041846186931 0.9534842532311845 1.003125437720884 1.1593453816188524 1.0 18.461687770237013 -3.1401697950058978 1.3776368453220194 1.051725322819106 1.7349524000488612e-12 0.07238310116277147 0.06802292497832695 82.23262397085134 11.391594493541943 0.020460355382846705 236.34679737165985 0.0007241527845552057 3.1401697950058978 -1.0517253228173709 AS(ph)PEARPQIPTKPR ddPTM_KYSE-520_SHP099_60min_R1 3 ASPEARPQIPTKPR 14 2 Q8N3F8;B0QY86 Q8N3F8 MICALL1 MICAL-like protein 1 1 AS(1)PEARPQIPTKPR;AS(1)PEARPQIPTKPR;AS(1)PEARPQIPTKPR 149.86 1.7766e-06 3223970000.0 2024590.0 1743290.0 1604680.0 1684350.0 1771520.0 1812900.0 1771370.0 1850360.0 2039560.0 1734390.0 True False 1912281.9567798928 1659539.7316683622 1708120.2403787787 1844430.1175817058 1910928.545429999 1801585.018638888 1950437.3665052284 1843941.5330372723 1669227.3171235851 1719024.6539350015 1.1124226475766406 0.9653961203345903 0.9936566275932915 1.0729515212941478 1.1116353340574332 1.0480274465609893 1.1346186118043755 1.0726672993411264 0.9710316331430001 1.0 20.713158805155103 -3.9194660232921392 19.39133061907952 1.0476861300404157 3.4719333782519577 0.11986301145363543 0.055452668213894954 705.322520026983 169673.60971652632 0.014079751474636413 68.95335571461679 0.00012037435600953866 3.9194660232921392 2.4242472482115422 AS(ph)PEPELQLRPYQMEVAQPALEGK ddPTM_KYSE-520_SHP099_60min_R1 13 ASPEPELQLRPYQMEVAQPALEGK 24 1 A0A3B3IRK8;Q9BYX4 A0A3B3IRK8 IFIH1 Interferon-induced helicase C domain-containing protein 1 1 AS(0.986)PEPELQLRPY(0.014)QMEVAQPALEGK;AS(0.778)PEPELQLRPY(0.222)QMEVAQPALEGK;AS(1)PEPELQLRPYQMEVAQPALEGK;AS(1)PEPELQLRPYQMEVAQPALEGK;AS(1)PEPELQLRPYQMEVAQPALEGK;AS(1)PEPELQLRPYQMEVAQPALEGK;AS(1)PEPELQLRPYQMEVAQPALEGK;AS(1)PEPELQLRPYQMEVAQPALEGK;AS(1)PEPELQLRPYQMEVAQPALEGK;AS(1)PEPELQLRPYQMEVAQPALEGK;AS(1)PEPELQLRPYQMEVAQPALEGK;AS(1)PEPELQLRPYQMEVAQPALEGK;AS(0.945)PEPELQLRPY(0.055)QMEVAQPALEGK 218.39 2.8419e-21 40731520000.0 9180340.0 9249610.0 7832560.0 7039300.0 7217974.0 8304500.0 7827990.0 8593640.0 10419010.0 7955030.0 True False 8671088.239645926 8805244.851652341 8337459.3501391 7708312.955557277 7785987.489145784 8252668.535102139 8619319.623020193 8563830.66861065 8527180.425868217 7884554.623119695 1.099756251826818 1.1167713678884192 1.0574420178016604 0.9776472260023885 0.9874987061812108 1.0466879778983371 1.0931904254611875 1.0861527477403896 1.081504388448799 1.0 22.910597832752902 -4.8538259623865505 5.024228618545287 1.0413121829238283 1.1079587258415429 0.3266273806662864 0.03900114451764659 0.264242006405405 10.933110560393255 0.011789975137947828 0.02599009101823206 1.4001483005724831e-05 4.8538259623865505 0.06664654291771455 AS(ph)PEPPGPESSSR ddPTM_KYSE-520_SHP099_60min_R1 9 ASPEPPGPESSSR 13 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 AS(0.999)PEPPGPESSSR;AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR;AS(1)PEPPGPESSSR 268.66 2.825e-22 30954920000.0 11042050.0 10691070.0 9619470.0 8519130.0 9439920.0 9739040.0 9068180.0 9665160.0 12062560.0 9625910.0 True False 10429525.474719036 10177454.949576758 10239556.427896183 9328785.55383017 10182787.998202419 9678255.038846534 9984880.131308185 9631633.815825295 9872303.176392082 9540631.926244661 1.0931692528698418 1.0667485160579673 1.0732576738160182 0.9777953521263367 1.0673074988032287 1.0144249472850215 1.046563813434776 1.0095383503193645 1.0347640756620167 1.0 23.185653396002145 -5.098547199841972 10.744433321067076 1.0245469081389296 1.0774801272745858 0.5279879351685305 0.024279672851266948 0.39971852955176707 41.411048497380435 0.006115868513870194 0.010605665791313727 7.969898677073614e-06 5.098547199841972 0.052933219135656184 AS(ph)PEPQR ddPTM_KYSE-520_SHP099_60min_R1 1 ASPEPQR 7 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 AS(1)PEPQR 76.064 0.038903 0.0 182140.0 157220.0 154850.0 187730.0 189730.0 221180.0 210800.0 157350.0 167510.0 198930.0 True False 172036.33111291192 149666.91520796876 164831.87876876013 205571.80275691737 204660.67158396964 219799.53357744476 232109.72120974283 156804.18957576598 137094.40658346482 197167.63496519826 0.872538391725791 0.7590845994292432 0.8359986607226604 1.0426244793837616 1.0380033803219983 1.1147850589993697 1.1772201926077377 0.795283615403934 0.6953190193089405 1.0 17.58906322743402 -5.177958566124198 5.921467186714353 0.9878865276337402 0.8129062129616453 0.21751894456857734 0.1367500990685605 0.37336956094497986 21.01030323711167 0.041252419899296795 0.07238172512692857 6.6380639784681005e-06 5.177958566124198 -0.17498031467209485 AS(ph)PHDVLETIFVR ddPTM_KYSE-520_SHP099_60min_R1 18 ASPHDVLETIFVR 13 0 H0YCL5;H0YEM7;O75143-4;O75143-3;O75143-2;O75143;O75143-5 H0YCL5 ATG13 Autophagy-related protein 13 1 AS(1)PHDVLETIFVR;AS(1)PHDVLETIFVR;AS(1)PHDVLETIFVR;AS(0.992)PHDVLET(0.008)IFVR;AS(1)PHDVLETIFVR;AS(1)PHDVLETIFVR;AS(1)PHDVLETIFVR;AS(1)PHDVLETIFVR;AS(1)PHDVLETIFVR;AS(1)PHDVLETIFVR;AS(1)PHDVLETIFVR;AS(1)PHDVLETIFVR;AS(0.999)PHDVLET(0.001)IFVR;AS(1)PHDVLETIFVR;AS(0.995)PHDVLET(0.005)IFVR;AS(0.989)PHDVLET(0.011)IFVR;AS(1)PHDVLETIFVR;AS(0.991)PHDVLET(0.009)IFVR 217.91 2.5019999999999998e-11 5274040000.0 1687394.0 1637557.0 1503999.0 1537801.0 1672624.0 1516844.0 1522164.0 1591382.0 1874253.0 1585659.0 True False 1593790.8910834538 1558886.303696832 1600949.182023485 1683953.1446832712 1804249.9928712652 1507376.813951288 1676039.1920090474 1585861.8672733512 1533935.9012732285 1571611.2948840344 1.0141126474921751 0.9919032198173776 1.0186673939255542 1.0714819562349391 1.1480255956065757 0.959128264640344 1.0664463900615568 1.0090674917110265 0.9760275370039346 1.0 20.583813010657074 -9.3117802861887 8.998185961722186 0.9999890832787436 1.0302735823964093 0.02465014795570397 0.05214814563984946 0.0 0.0 0.05170407966345878 0.01254008127810533 4.87775197918969e-10 9.3117802861887 0.03028449911766573 AS(ph)PIKMDLAPSK ddPTM_KYSE-520_SHP099_60min_R1 12 ASPIKMDLAPSK 12 1 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(0.999)PIKMDLAPS(0.001)K;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK;AS(1)PIKMDLAPSK 164.53 4.8654e-06 33695930000.0 34243900.0 32359190.0 29973540.0 30548500.0 31380770.0 28154670.0 29106720.0 33334030.0 34500450.0 29119270.0 True False 32344322.60347778 30804605.940265574 31905682.34775969 33451820.255258575 33850258.06684277 27978946.261085443 32049111.311812393 33218402.030151084 28236037.96556923 28861295.92224922 1.120681576136139 1.0673327359676268 1.1054833585335837 1.159054685048654 1.1728599491177925 0.9694279264680014 1.1104529539543537 1.1509670986236957 0.9783357629413315 1.0 24.782632745004857 -6.240662342670319 24.997904546991354 1.0555606889761087 1.1226726444878103 0.3136327946082532 0.05982427868869664 1292.132095559691 1554630.9688867456 0.020250652166313405 0.020225566015299613 5.745630025588126e-07 6.240662342670319 0.06711195551170168 AS(ph)PLAQGQK ddPTM_KYSE-520_SHP099_60min_R1 3 ASPLAQGQK 9 0 A0A590UK01 A0A590UK01 1 AS(1)PLAQGQK;AS(1)PLAQGQK;AS(1)PLAQGQK 152.67 0.00023930000000000002 1276850000.0 1562960.0 1500160.0 1422940.0 1242270.0 1394330.0 1449180.0 1317440.0 1426210.0 1844050.0 1531850.0 True False 1476259.4931164836 1428090.0618139328 1514664.9891844983 1360334.967297904 1504055.8383475263 1440135.1300739744 1450619.6921753497 1421262.8103899157 1509217.0047175603 1518279.000761267 0.972324251587676 0.9405979145452757 0.9976196657037628 0.8959716670097065 0.9906320495728326 0.948531284007675 0.9554368409547963 0.9361012104345069 0.9940314026347179 1.0 20.53400549580172 -7.844288081361238 7.058872959143507 0.9987717113497955 0.9547304630523645 0.27752475066175 0.027365738363104672 0.2884010621991079 20.015245698599777 0.024158590556980886 0.0062738479952697 1.4312381984459226e-08 7.844288081361238 -0.044041248297430946 AS(ph)PPGDLQNPK ddPTM_KYSE-520_SHP099_60min_R1 8 ASPPGDLQNPK 11 0 O00273 O00273 DFFA DNA fragmentation factor subunit alpha 1 AS(1)PPGDLQNPK;AS(1)PPGDLQNPK;AS(1)PPGDLQNPK;AS(1)PPGDLQNPK;AS(1)PPGDLQNPK;AS(1)PPGDLQNPK;AS(1)PPGDLQNPK;AS(1)PPGDLQNPK 193.0 6.8771e-07 12811300000.0 7435960.0 6537140.0 5821630.0 5699770.0 6136680.0 6447820.0 6139970.0 6898720.0 7579150.0 6337310.0 True False 7023472.475581247 6223085.98195282 6196901.584737334 6241474.427101656 6619601.803067071 6407576.76368262 6760658.087932564 6874789.950493349 6202967.4148234 6281166.363752568 1.1181796610439088 0.9907532489292245 0.9865845331686309 0.9936808015657781 1.053880986382967 1.0201253067677911 1.0763380073718558 1.0945084960918199 0.9875502503196795 1.0 22.58260105056834 -5.782285124275443 24.757019170886267 1.0444090492975435 1.0174951662668537 0.01637016923193524 0.04667869830568134 634.3070796027822 753317.4041864875 0.014496239758468614 0.016454431203859414 1.6508776034064785e-06 5.782285124275443 -0.026913883030689867 AS(ph)PPPQGPLPGPPGALHR ddPTM_KYSE-520_SHP099_60min_R1 11 ASPPPQGPLPGPPGALHR 18 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR;AS(1)PPPQGPLPGPPGALHR 157.28 3.7042e-07 23203250000.0 3531201.0 3236351.0 2987977.0 2683136.0 3025918.0 2914301.0 2786488.0 2943812.0 3570916.0 3060832.0 True False 3335318.2412553257 3080871.840098115 3180586.7783522345 2938140.4387257467 3264040.531481694 2896111.7664539353 3068173.4005421908 2933600.6032628873 2922527.669866875 3033715.409771262 1.0994169823948001 1.0155441180062466 1.0484130344289764 0.9684957360411333 1.0759217957520273 0.9546418748198593 1.011358346488251 0.966999275480516 0.9633493176234449 1.0 21.532654323277935 -1.0000000001133411 0.3662278365422277 0.9800348812490659 2.365265309869409 0.4542856973943963 0.03524265667084817 58.00969894696927 0.8059311619587973 0.026706391650678746 56.3291415224382 0.09999999997390224 1.0000000001133411 1.3852304286203432 AS(ph)PPRSPAEPK ddPTM_KYSE-520_SHP099_60min_R1 7 ASPPRSPAEPK 11 1 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 AS(1)PPRSPAEPK;AS(1)PPRSPAEPK;AS(1)PPRSPAEPK;AS(0.943)PPRS(0.057)PAEPK;AS(0.999)PPRS(0.001)PAEPK;AS(0.999)PPRS(0.001)PAEPK;AS(0.999)PPRS(0.001)PAEPK 115.83 0.00018614 4461120000.0 4657340.0 4176300.0 3753170.0 3218270.0 3566770.0 3332400.0 3072780.0 3277370.0 4660290.0 2988810.0 True False 4398988.066022891 3975664.279245898 3995105.343484321 3524133.41319184 3847454.5068547674 3311601.2555089854 3383406.589842855 3266001.568413908 3814098.8123506373 2962331.4686589907 1.4849749639982914 1.3420727293038648 1.3486354872005104 1.1896485759533082 1.2987927068797809 1.1179036817942944 1.1421431482731672 1.1025105066626406 1.287532760159764 1.0 21.49830164865286 -1.0000000000000002 0.2302886472466471 1.0676690886004248 3.370726612393343 0.7184486262807419 0.0732815169367579 26.322192342163973 0.3445640615794353 0.10281729499505239 22.868442776325345 0.09999999999999995 1.0000000000000002 2.3030575237929183 AS(ph)PS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 2 ASPSPPPK 8 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 AS(1)PS(1)PPPK;AS(1)PS(1)PPPK 53.683 0.045906999999999996 309960000.0 1179880.0 1099690.0 999680.0 919590.0 1000600.0 1018330.0 982830.0 995500.0 1226290.0 1041400.0 True False 1114429.7043675315 1046859.2417316573 1064120.9723445547 1006987.5571151855 1079341.5273647804 1011974.2247396654 1082184.0478964509 992046.8428514462 1003626.6482552502 1032174.0061969389 1.0796916970169255 1.0142274804892892 1.0309511438534718 0.9755986404128183 1.0456972573274064 0.9804298680881338 1.0484511733479656 0.961123644749259 0.9723424948019453 1.0 19.977254773337236 -1.0000000000000013 0.6223200747192006 0.99674396975366 6.659051180571981 0.4043473191147292 0.028902436049153664 198.96516932126383 1.4244930566779535 0.012287322111034364 1541.4014166893237 0.09999999999999969 1.0000000000000013 5.662307210818321 AS(ph)PS(ph)PPPKR ddPTM_KYSE-520_SHP099_60min_R1 6 ASPSPPPKR 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 AS(1)PS(1)PPPKR;AS(1)PS(1)PPPKR;AS(1)PS(1)PPPKR;AS(1)PS(1)PPPKR;AS(1)PS(1)PPPKR;AS(1)PS(1)PPPKR 69.346 0.030258999999999998 9699530000.0 6689920.0 6058320.0 5983670.0 5730760.0 5906340.0 5867850.0 6186640.0 5983790.0 7128310.0 5891740.0 True False 6318816.80157511 5767269.213476286 6369386.942410507 6275409.707384181 6371135.355522382 5831226.571581562 6812045.946987879 5963033.629117079 5833988.594071867 5839543.767304355 1.0820737121543995 0.98762325333826 1.090733659378109 1.074640409841646 1.091033068575393 0.9985757113818786 1.1665373560737005 1.0211471763434918 0.999048697389068 1.0 22.47742422775156 -7.506347290348517 24.987177276941484 1.0030488474162775 1.0679979339096901 0.28074136850470666 0.04722777711288599 912.3924896836648 1379084.9092810468 0.025888738779198926 0.011917789550629387 3.116396512392144e-08 7.506347290348517 0.06494908649341258 AS(ph)PSKPASAPASR ddPTM_KYSE-520_SHP099_60min_R1 10 ASPSKPASAPASR 13 1 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-4;B5MEG9;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 AS(0.922)PS(0.078)KPASAPASR;AS(0.81)PS(0.19)KPASAPASR;AS(0.64)PS(0.354)KPAS(0.006)APASR;AS(0.887)PS(0.113)KPASAPASR;AS(0.513)PS(0.487)KPASAPASR;AS(0.874)PS(0.126)KPASAPASR;AS(0.666)PS(0.332)KPAS(0.002)APASR;AS(0.659)PS(0.34)KPASAPASR;AS(0.996)PS(0.004)KPASAPASR;AS(0.999)PS(0.001)KPASAPASR 219.01 3.608e-11 156376410000.0 75697200.0 72788600.0 70438400.0 63744400.0 65274700.0 60482900.0 66608300.0 67508700.0 78368000.0 65445900.0 True False 71498125.41737291 69291726.39808387 74978971.96942486 69802648.61054732 70411447.52776113 60105403.78610744 73341716.99836293 67274528.07634911 64138346.696513504 64866100.2421397 1.1022417742160608 1.068227103825013 1.1559038032120732 1.0761036712547833 1.0854891424784459 0.9266073274289501 1.130663269790915 1.0371292219698571 0.9887806798480323 1.0 25.950961370633088 -6.026030840158071 24.62818741749331 1.0238572419832868 1.099572072880707 0.3717289291686774 0.05249230060068229 734.7015830381233 695111.4862164585 0.017034319479765827 0.017096099591480497 9.418227133504866e-07 6.026030840158071 0.07571483089742026 AS(ph)PSPQPSSQPLQIHR ddPTM_KYSE-520_SHP099_60min_R1 2 ASPSPQPSSQPLQIHR 16 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 AS(0.883)PS(0.117)PQPSSQPLQIHR;AS(0.953)PS(0.047)PQPSSQPLQIHR 140.96 1.1534000000000002e-05 2079840000.0 3681180.0 3335960.0 2931190.0 2981390.0 3035340.0 3420450.0 3223070.0 3096450.0 3955840.0 3212910.0 True False 3476977.607149606 3175695.474221953 3120139.1974698235 3264740.409212412 3274203.9892778476 3399101.702798498 3548889.369731904 3085709.1376668666 3237559.174611269 3184446.117006152 1.0918625969462084 0.9972520675613046 0.9798059325943984 1.0252145237369406 1.02818633726988 1.0674075107272198 1.114444785477602 0.9689939864857526 1.0166788997689342 1.0 21.602611030113966 -4.24573077630693 23.46330346951719 1.0243126640314737 1.091862716112675 0.20924111055840244 0.04052091567463132 2188.819525007156 3269224.8599825064 0.010793202736500538 0.23136467327153754 5.6789654132039335e-05 4.24573077630693 0.06755005208120135 AS(ph)PSTAGETPSGVK ddPTM_KYSE-520_SHP099_60min_R1 1 ASPSTAGETPSGVK 14 0 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 AS(0.902)PS(0.098)TAGETPSGVK 264.97 9.602e-25 796350000.0 553850.0 496290.0 409140.0 362280.0 406510.0 500220.0 422400.0 584180.0 540260.0 552010.0 True False 523126.8364273971 472447.4834535227 435513.81904714624 396710.9822765466 438500.0242744926 497097.94143281237 465100.3142267332 582153.6159286376 442162.40284629393 547119.620857281 0.9561470955980528 0.8635177124761956 0.7960120647194853 0.7250900299553152 0.8014701128565037 0.9085726822480068 0.8500888955471348 1.0640335197930972 0.808164039435234 1.0 19.06149676915551 -6.772955011953976 1.8255227204708995 0.9485112880495048 0.8264361534710092 0.24975200058624258 0.08590169510298208 0.48732213939899155 3.319953079956367 0.04598692512567424 0.028463100476408282 1.6867277424489651e-07 6.772955011953976 -0.12207513457849561 AS(ph)PSVTCK ddPTM_KYSE-520_SHP099_60min_R1 1 ASPSVTCK 8 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 AS(0.967)PS(0.033)VTCK 159.11 0.00023595 880700000.0 1123100.0 1016200.0 918360.0 846930.0 902210.0 800880.0 812420.0 811870.0 1016400.0 880130.0 True False 1060799.404155656 967380.2266527022 977558.955027953 927421.9725612109 973208.7941273022 795881.4108486475 894547.3420551202 809053.8124618833 831847.381358926 872332.7329307786 1.216049064892573 1.108957843875229 1.120626245152633 1.0631516364694338 1.1156394313642342 0.9123599067235761 1.0254657520986368 0.9274601100244204 0.9535895535688155 1.0 19.73451900002211 -5.603814134510273 0.6652096350538661 0.9528123591536066 1.188762741382675 0.7240581080835196 0.048871163608667806 0.47727175149603374 0.4264004960509726 0.029191403233092425 0.06696821752572028 2.4899227052626024e-06 5.603814134510273 0.23595038222906828 AS(ph)PTLDFTER ddPTM_KYSE-520_SHP099_60min_R1 1 ASPTLDFTER 10 0 A0A0D9SGJ6;J3KQV8;O43426 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 AS(0.826)PT(0.174)LDFTER 108.2 0.0014787000000000001 0.0 153130.0 160970.0 151740.0 157800.0 140700.0 152050.0 156210.0 156380.0 172930.0 148510.0 True False 144635.573642913 153236.75957910408 161521.40319258414 172797.26455570004 151772.28952650874 151100.9995499162 172001.23126268477 155837.55427936625 141530.2712105462 147194.31693903147 0.9826165619072215 1.0410507875964763 1.0973345068715323 1.1739397834718945 1.0311015580130956 1.0265409880770253 1.1685317398084631 1.0587199120188509 0.9615199428464936 1.0 17.167362445545383 -7.677770833262123 5.636113355074123 0.9815763131417449 1.076809176631453 0.2852992152048778 0.058211909883830015 0.2528102439039817 12.642376418917646 0.04355226670860326 0.015478761582611017 2.1000477359137605e-08 7.677770833262123 0.09523286348970805 AS(ph)PVAALK ddPTM_KYSE-520_SHP099_60min_R1 3 ASPVAALK 8 0 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 AS(1)PVAALK;AS(1)PVAALK;AS(1)PVAALK 131.52 0.00078883 2519960000.0 7291900.0 6669200.0 5231800.0 4751930.0 5996200.0 5947400.0 5696000.0 6465500.0 7296100.0 6361800.0 True False 6887403.770957736 6348801.621326713 5569050.199175973 5203551.99848015 6468066.826288918 5910280.070523991 6271807.267602921 6443072.68955904 5971312.15971355 6305439.401405498 1.0922956089979259 1.006876954508761 0.8832136580258971 0.8252481178901291 1.0257916085669097 0.9373304054284584 0.9946661712750613 1.0218277076967646 0.9470096815746939 1.0 22.588165479154494 -6.781061862997146 23.99089494611401 0.9926948927562255 0.9569727015605849 0.035033997961958496 0.07190928979471987 583.7822819480044 713735.6698672932 0.03223057183607012 0.0217710380939328 1.6555341244207627e-07 6.781061862997146 -0.035722191195640574 AS(ph)PVAVGSSGAGADPSFQPVLSAR ddPTM_KYSE-520_SHP099_60min_R1 1 ASPVAVGSSGAGADPSFQPVLSAR 24 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 AS(1)PVAVGSSGAGADPSFQPVLSAR 261.46 1.7076999999999998e-37 235440000.0 158300.0 165450.0 112830.0 92466.0 120130.0 149930.0 111450.0 151530.0 166120.0 150210.0 True False 149518.78343677352 157501.533654487 120103.20233438286 101253.94083908327 129583.5475537987 148994.23125629046 122716.45364718138 151004.37779736792 135956.7955444164 148879.25626161174 1.0042956096854623 1.0579145651945234 0.806715491131529 0.6801077825184665 0.8703935713252995 1.0007722700768782 0.8242683146639523 1.0142741278343164 0.9132017378264714 1.0 17.183783227864538 -7.2722843527061185 24.66712399334732 0.9728034467673461 0.8903579407752068 0.11303515296836963 0.10734420443414794 1644.2776936973316 3739918.7561479043 0.06364319467633313 0.031065300698085475 5.342144699162574e-08 7.2722843527061185 -0.08244550599213929 AS(ph)PVSFQELNR ddPTM_KYSE-520_SHP099_60min_R1 1 ASPVSFQELNR 11 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 AS(0.999)PVS(0.001)FQELNR 158.02 2.5364e-05 253240000.0 75509.0 70906.0 71048.0 69592.0 69186.0 48077.0 55120.0 77044.0 89737.0 45153.0 True False 71320.36524654031 67499.56932792411 75627.86776081922 76206.00275640222 74630.54458550844 47776.933609742366 60692.06751935968 76776.75234620483 73443.02288568078 44752.979548502415 1.5936450704750211 1.5082698405537307 1.6898957013321358 1.7028140589792826 1.6676106337149081 1.0675698934852516 1.3561570231001667 1.715567390613527 1.641075602711204 1.0 15.449696116378872 AS(ph)QEANLLTLAQK ddPTM_KYSE-520_SHP099_60min_R1 5 ASQEANLLTLAQK 13 0 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 AS(1)QEANLLTLAQK;AS(1)QEANLLTLAQK;AS(1)QEANLLTLAQK;AS(1)QEANLLTLAQK;AS(1)QEANLLTLAQK 239.58 7.7147e-16 1110712000.0 1117371.0 1058484.0 944510.0 969079.0 1056508.0 1257023.0 1135430.0 1457302.0 1616890.0 1355703.0 True False 1055388.2032061343 1007632.8398231257 1005394.6258694319 1061179.9767957756 1139649.1688917743 1249177.4531879928 1250210.3451289304 1452246.959498843 1323303.5344799631 1343692.5261409727 0.7854387686721485 0.7498983734895095 0.7482326546511961 0.7897491101207796 0.8481472857222759 0.9296601930023208 0.9304288896504328 1.0807881500015735 0.9848261478989052 1.0 20.35777161684511 -6.327564750704622 1.0276815840514875 1.022325772783903 0.7563259812260309 0.914165939639175 0.03247683155109911 0.13105522402925074 0.289849028296385 0.01837115327628965 0.015628560179072486 4.703652718545968e-07 6.327564750704622 -0.2659997915578721 AS(ph)QS(ph)RPNSSALETLGGEK ddPTM_KYSE-520_SHP099_60min_R1 1 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 2 AS(0.796)QS(0.903)RPNS(0.232)S(0.069)ALETLGGEK 123.14 9.280200000000001e-05 0.0 727010.0 820210.0 754300.0 879380.0 901190.0 769420.0 720100.0 819370.0 982710.0 822850.0 True False 686681.3060414954 780805.8804396902 802923.3849226729 962956.0108047611 972108.5259303098 764617.7643781421 792894.7354987463 816527.7967123964 804274.6361031382 815560.1891676135 0.8419750193328392 0.9573859671063706 0.9845053689319507 1.1807295446674322 1.1919519108975567 0.9375368912483764 0.9722087296928994 1.00118643302804 0.9861622070150412 1.0 19.637431827657615 -4.466616284294741 2.0299714549384142 1.0381767341531551 0.8295846366062236 0.3467775121665809 0.08127182782710048 0.5983356704659524 3.6787310358602356 0.02476186178154377 0.19763962754021897 3.414945017596941e-05 4.466616284294741 -0.20859209754693153 AS(ph)S(ph)HSSQTQGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 1 ASSHSSQTQGGGSVTK 16 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.551)S(0.551)HS(0.5)S(0.395)QT(0.004)QGGGSVTK 110.6 0.00015108 277670000.0 101380.0 150020.0 155550.0 430570.0 96785.0 117830.0 139770.0 112840.0 157300.0 98439.0 True False 95756.2493039805 142812.8140153891 165577.0018887996 471491.2433444087 104401.42886867901 117094.57926318068 153899.31562374643 112448.58437705407 128738.28521030988 97566.90704438322 0.9814418864423051 1.463742352213989 1.6970610927891623 4.832491442307658 1.0700495898797608 1.2001464718966066 1.5773720853294815 1.152527919388704 1.31948720227184 1.0 16.57410427386593 AS(ph)SATFRPVIR ddPTM_KYSE-520_SHP099_60min_R1 1 ASSATFRPVIR 11 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 AS(0.498)S(0.498)AT(0.004)FRPVIR 137.95 6.8435e-05 344980000.0 364970.0 227590.0 197920.0 126870.0 188490.0 185210.0 169310.0 216630.0 259640.0 231240.0 True False 344724.38655034243 216656.23478044558 210678.2398831967 138927.68665514354 203323.09063860463 184054.03568983893 186425.50710636438 215878.5610918219 212495.92099176667 229191.39350199793 1.5040895789454563 0.9453070268912909 0.9192240453015097 0.6061645009106001 0.8871323112612088 0.8030582338958312 0.8134053563609894 0.9419139078184453 0.927154888954913 1.0 17.806193344076505 -4.201277054046301 2.368459243695289 0.848396359470467 1.725227985287418 0.7743395318626912 0.1031137169803079 0.32351243613653524 1.9082955746361907 0.027124089636094327 0.6182623919804827 6.291047234247063e-05 4.201277054046301 0.876831625816951 AS(ph)SHSSQTQGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 3 ASSHSSQTQGGGSVTK 16 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.524)S(0.473)HS(0.003)SQTQGGGSVTK;AS(0.25)S(0.25)HS(0.25)S(0.25)QTQGGGSVTK;AS(0.234)S(0.234)HS(0.234)S(0.234)QT(0.063)QGGGSVTK 127.49 5.3017e-05 285727000.0 346844.0 918736.0 1622560.0 169257.1 257279.0 900206.0 231058.0 150618.6 214040.0 979278.0 True False 327603.8719036277 874598.5435091485 1727152.8137877912 185343.24389499723 277525.393582734 894587.4804395401 254415.5975487703 150096.1392312454 175175.73150931176 970602.3587867542 0.33752635045429946 0.9010884175084741 1.779464883999169 0.19095692712582618 0.28593109327452976 0.9216827801219935 0.2621213468580356 0.15464225681345395 0.1804814607377218 1.0 19.88852084062363 -5.3311761628533825 24.999961957311427 0.4004924812164787 0.9955701654585271 0.270998126771387 0.4327256895714787 205.72536924483825 73749.79824722974 0.12295890317370788 0.1823775284261553 4.664701276743191e-06 5.3311761628533825 0.5950776842420484 AS(ph)SISEEVAVGSIAATLK ddPTM_KYSE-520_SHP099_60min_R1 1 ASSISEEVAVGSIAATLK 18 0 Q12802-2;Q12802;Q12802-4;H0YMW2;A0A087X047 Q12802-2 AKAP13 A-kinase anchor protein 13 1 AS(0.499)S(0.499)IS(0.001)EEVAVGSIAATLK 65.225 0.020633000000000002 17755000.0 27874.0 32630.0 24033.0 22923.0 21495.0 31743.0 21386.0 33328.0 38021.0 35010.0 True False 26327.77365455861 31062.405821371467 25582.2056341596 25101.595027948733 23186.53421017986 31544.880162532016 23547.905587246503 33212.39294681367 31117.34483141256 34699.83863736784 0.7587289938059408 0.8951743593389722 0.7372427837923843 0.7233922696377363 0.668202940437036 0.9090785836842975 0.6786171495877807 0.9571339306185604 0.8967576234750172 1.0 15.08264133348813 -7.2789359309245105 24.77209591295574 0.9452093667051614 0.7709385455770422 0.5311692309960039 0.0791403601274512 627.9691939873076 889090.8323834153 0.042498489863070976 0.02049256730771954 5.260948725482095e-08 7.2789359309245105 -0.1742708211281192 AS(ph)SPCHSPR ddPTM_KYSE-520_SHP099_60min_R1 6 ASSPCHSPR 9 0 Q86Y91;A0A494BYR6;Q86Y91-6 Q86Y91 KIF18B Kinesin-like protein KIF18B 1 AS(0.5)S(0.5)PCHSPR;AS(0.488)S(0.488)PCHS(0.025)PR;AS(0.5)S(0.5)PCHSPR;AS(0.5)S(0.5)PCHSPR;AS(0.5)S(0.5)PCHSPR;AS(0.498)S(0.498)PCHS(0.004)PR 118.03 0.00080179 987874000.0 709700.0 694039.0 679568.0 883381.0 710340.0 650584.0 636122.0 600064.0 784493.0 699210.0 True False 670331.5262481243 660696.3246662229 723374.0406272445 967337.2646418177 766239.7167182685 646523.4639341191 700427.4197124481 597982.5180399907 642048.8466591962 693015.5433771482 0.9672676647070829 0.9533643667594671 1.0438063728010423 1.3958377613406283 1.1056602179285764 0.9329133669694223 1.0106951083653635 0.8628702830039711 0.9264566326036713 1.0 19.402528184810347 -6.260785054255241 24.769868602216516 0.9420232181919244 1.0994898745496062 0.2699795925093158 0.12019309662571845 78.24994479196012 2962224.6551878564 0.04518145882645077 0.042632528621181755 5.485483912779346e-07 6.260785054255241 0.15746665635768187 AS(ph)SPCPEFEQFQIVPAVETPYLAR ddPTM_KYSE-520_SHP099_60min_R1 1 ASSPCPEFEQFQIVPAVETPYLAR 24 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 AS(0.5)S(0.5)PCPEFEQFQIVPAVETPYLAR 72.99 0.011428 126710000.0 84722.0 117250.0 90797.0 78366.0 84070.0 103310.0 80514.0 102930.0 101510.0 97439.0 True False 80022.30177088016 111617.13400416204 96649.91990033662 85813.88107840305 90685.83070713283 102665.20396910122 88653.1408609167 102572.95985404271 83078.3428588592 96575.76626639486 0.8285960843442487 1.1557468122621677 1.0007678285848358 0.8885653657843502 0.9390122824082471 1.063053475401989 0.9179646643069405 1.0620983277637703 0.8602400588745595 1.0 16.559373598906394 -5.018405201783818 24.658373789538267 0.9640101713936737 1.0136928957937545 0.014969450349677671 0.09714500150275443 2072.5996256254944 2776774.3481720607 0.024834784482871207 0.04415240906457222 9.585059170644635e-06 5.018405201783818 0.04968272440008081 AS(ph)SPEKAEEDR ddPTM_KYSE-520_SHP099_60min_R1 3 ASSPEKAEEDR 11 1 Q8N3D4;H0YDZ9 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AS(0.784)S(0.216)PEKAEEDR;AS(0.942)S(0.058)PEKAEEDR;AS(0.64)S(0.36)PEKAEEDR 234.52 7.9479e-17 1904930000.0 3149620.0 3069490.0 2725900.0 2566650.0 3016430.0 2851780.0 2506360.0 2849250.0 3670530.0 2672770.0 True False 2974904.299988188 2922027.093001578 2901615.8755942066 2810583.644308541 3253805.8798610317 2833980.983205919 2759727.328516371 2839366.61676995 3004054.2785314615 2649091.337183597 1.122990460250035 1.1030299529453578 1.0953249647779542 1.0609613964072058 1.2282724397567741 1.0697936093886777 1.0417637511322646 1.07182662104382 1.1339942252520618 1.0 21.337066156115945 -10.410377724306107 6.064696134208333 0.9999730190494828 1.1016130881857114 0.27859072895450887 0.04972311883030693 1.8468993141478537e-05 1.7955858070090735e-06 0.049017122362427806 0.01188524414427964 3.887069230573799e-11 10.410377724306107 0.10164006913622858 AS(ph)SPELPVSVENIK ddPTM_KYSE-520_SHP099_60min_R1 1 ASSPELPVSVENIK 14 0 Q969R5 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 1 AS(0.5)S(0.5)PELPVSVENIK 80.96 0.0083909 192370000.0 575770.0 576320.0 442580.0 422310.0 482670.0 638950.0 577010.0 681580.0 587560.0 723550.0 True False 543830.8903309614 548632.7221260438 471109.4149530374 462446.2154278683 520653.38298336935 634962.0760435314 635339.8018749224 679215.7580619673 480873.9151822608 717139.9099133814 0.758333043264385 0.7650288521695989 0.6569281787844433 0.644847970438187 0.7260136770888341 0.8854089240692576 0.8859356355605154 0.9471174992115629 0.6705440717144614 1.0 19.45189508241182 -6.223335692647561 5.232493644562993 0.8753295447844439 0.705227055408722 0.4822379867116777 0.08685462004198988 0.1785018683173447 12.870306658735982 0.028919940784076063 0.028302366539184404 5.979492250235458e-07 6.223335692647561 -0.17010248937572192 AS(ph)SPFR ddPTM_KYSE-520_SHP099_60min_R1 1 ASSPFR 6 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AS(0.5)S(0.5)PFR 92.18700000000001 0.014747999999999999 1368300000.0 1432000.0 1200500.0 1048800.0 1172900.0 1197000.0 1212900.0 1191000.0 1260500.0 1312400.0 1210900.0 True False 1352564.1053787726 1142826.178012763 1116407.326139332 1284372.063354755 1291197.090001641 1205329.8411975906 1311397.9030398652 1256127.6197029115 1074101.2429117032 1200172.3680659442 1.1269748757492266 0.9522183716447383 0.9302058236338185 1.070156335480792 1.0758430408478588 1.0042972770152654 1.0926746340220772 1.0466226794798967 0.8949558175902664 1.0 20.19481018907117 -7.744088651520733 24.99981866049233 0.9474778908416104 1.0340791648976602 0.24696495091019655 0.06257885980717223 310.8162433714102 447843.6836205688 0.04330333171948065 0.016281008989239655 1.8026497326105695e-08 7.744088651520733 0.08660127405604978 AS(ph)SPFRR ddPTM_KYSE-520_SHP099_60min_R1 1 ASSPFRR 7 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AS(0.5)S(0.5)PFRR 71.692 0.02062 23546000000.0 6448600.0 5954600.0 5622800.0 5325800.0 5898100.0 5487500.0 5045000.0 4928600.0 6813800.0 4868000.0 True False 6090883.30303461 5668532.077963181 5985254.684798086 5831962.4307398405 6362246.914401575 5453250.477015231 5554997.834455183 4911503.8369438825 5576585.6819199575 4824873.307246687 1.2623923811401323 1.1748561499945225 1.240499864692524 1.2087286151079994 1.3186350209125366 1.1302370300220643 1.1513251189646556 1.0179549853810839 1.1557994017261015 1.0 22.202059629548078 -6.72025701157396 1.8409981630076457 1.0689081869766028 1.2340518452617657 0.6315680410238085 0.057939358128157974 0.22454676714175076 1.558434279044734 0.02807100109679991 0.018188490642590035 1.904333417019626e-07 6.72025701157396 0.16514365828516286 AS(ph)SPIKQSHEPVPDTSVEK ddPTM_KYSE-520_SHP099_60min_R1 2 ASSPIKQSHEPVPDTSVEK 19 1 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 AS(0.402)S(0.402)PIKQS(0.196)HEPVPDTSVEK;AS(0.498)S(0.498)PIKQS(0.004)HEPVPDTSVEK 127.28 1.0855e-05 1527790000.0 1410210.0 1465870.0 1590620.0 1112460.0 1156190.0 1300970.0 1137850.0 1212760.0 1930260.0 1156550.0 True False 1331982.840116061 1395447.4048842706 1693153.9102819841 1218187.863926705 1247175.5751787792 1292850.1636596804 1252874.9823458528 1208553.2186203115 1579773.4418948053 1146303.866782285 1.1619805870977156 1.2173451083274631 1.4770550456527083 1.0627093733411201 1.0879973550814623 1.1278424518350059 1.0929693414214126 1.0543044070964904 1.378145435668192 1.0 20.128558099448714 -5.311243258487976 24.99992655213222 1.1156257540214474 1.2786496758951824 0.29319553467931647 0.12124642046533822 460.8712050506606 231341.3067304212 0.03353776698766822 0.04974461615159375 4.8837873037760295e-06 5.311243258487976 0.16302392187373504 AS(ph)SPPDRIDIFGR ddPTM_KYSE-520_SHP099_60min_R1 6 ASSPPDRIDIFGR 13 1 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 AS(0.5)S(0.5)PPDRIDIFGR;AS(0.578)S(0.422)PPDRIDIFGR;AS(0.5)S(0.5)PPDRIDIFGR;AS(0.5)S(0.5)PPDRIDIFGR;AS(0.591)S(0.409)PPDRIDIFGR;AS(0.5)S(0.5)PPDRIDIFGR 174.87 6.5779e-07 55089460000.0 3508220.0 3825830.0 3701400.0 2701480.0 3011880.0 2913030.0 2352690.0 2402220.0 4218670.0 2705260.0 True False 3313612.0431368113 3642031.384112091 3939998.166449392 2958227.8469704236 3248897.8207469876 2894848.699236385 2590522.865241695 2393887.259502364 3452665.8720163875 2681293.5010604295 1.23582593320213 1.3583113458753013 1.4694393451858796 1.1032838612410274 1.2116904842614489 1.0796463341635283 0.9661466990529626 0.892810600016597 1.2876866596852925 1.0 21.35449771827857 -5.741650970960962 1.3337661803691412 1.0348295763433828 1.3474548908842954 0.49906243203308387 0.12341311776999027 0.3449511276773822 1.284576319503442 0.04794578873710423 0.06914177347677657 1.8127963957278567e-06 5.741650970960962 0.3126253145409126 AS(ph)SRVSGSFPEDSSK ddPTM_KYSE-520_SHP099_60min_R1 1 ASSRVSGSFPEDSSK 15 1 O15400-2;O15400 O15400-2 STX7 Syntaxin-7 1 AS(0.395)S(0.302)RVS(0.302)GSFPEDSSK 121.26 0.00040233 0.0 204610.0 271300.0 229690.0 186360.0 240070.0 259680.0 204540.0 174230.0 359760.0 208340.0 True False 193259.87542007744 258266.34077039792 244496.1849169939 204071.5983688231 258962.14318855008 258059.24079659488 225216.89931803013 173625.63679558775 294436.65281157714 206494.2696860673 0.935909145149112 1.2507191660235393 1.1840337520682815 0.9882676099393587 1.2540887627644561 1.2497162327502922 1.090669003359884 0.8408254478903959 1.4258829228491832 1.0 17.65574222116531 -10.247585817676336 4.802179698490707 0.9999676181048748 1.1329016500936566 0.056051374781312724 0.16657809130163467 5.5152964617719336e-05 8.641508651720572e-06 0.1540322791458168 0.037349219854077124 5.654760065745669e-11 10.247585817676336 0.13293403198878184 AS(ph)SWPHRR ddPTM_KYSE-520_SHP099_60min_R1 4 ASSWPHRR 8 1 A0A2R8YFR7;A0A2R8YF49;H0Y895;Q12774 A0A2R8YFR7;Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 AS(0.5)S(0.5)WPHRR;AS(0.5)S(0.5)WPHRR;AS(0.5)S(0.5)WPHRR;AS(0.5)S(0.5)WPHRR 87.30799999999999 0.003181 4487570000.0 1790580.0 2321290.0 2168990.0 3298980.0 1607170.0 1749340.0 1621290.0 1405450.0 2157600.0 1209350.0 True False 1691252.9579672627 2209771.744072675 2308806.5659067053 3612514.0673254956 1733645.1354535834 1738421.7201752758 1785185.8154655779 1400574.8219844955 1765834.2286698318 1198636.0998600624 1.4109811628105577 1.8435718266208234 1.9261947526661782 3.0138538858851716 1.4463481749431557 1.4503331915151163 1.4893476140706872 1.168473752916343 1.4732029419737886 1.0 20.19296229929193 -5.968114067228347 24.99997785818227 1.3499199876339396 2.050861111973355 0.4334605617016948 0.39942462070155876 198.3310317526307 155499.46493728596 0.1271035332780634 0.14412081861764298 1.076182517706744e-06 5.968114067228347 0.7009411243394152 AS(ph)TDNEELLQFPLELCSDSLPSHPFPPAK ddPTM_KYSE-520_SHP099_60min_R1 6 ASTDNEELLQFPLELCSDSLPSHPFPPAK 29 0 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5;H0YFC4 Q86YS7 C2CD5 C2 domain-containing protein 5 1 AS(0.884)T(0.114)DNEELLQFPLELCS(0.001)DSLPSHPFPPAK;AS(0.978)T(0.022)DNEELLQFPLELCSDSLPSHPFPPAK;AS(0.5)T(0.5)DNEELLQFPLELCSDSLPSHPFPPAK;AS(0.581)T(0.419)DNEELLQFPLELCSDSLPSHPFPPAK;AS(0.795)T(0.205)DNEELLQFPLELCSDSLPSHPFPPAK;AS(0.874)T(0.126)DNEELLQFPLELCSDSLPSHPFPPAK 299.37 8.976299999999999e-53 1302408000.0 652862.0 847865.0 731561.0 989869.0 739441.0 753879.0 632806.0 697920.0 935599.0 741820.0 True False 616646.4434118683 807132.2927286886 778718.592598986 1083945.8521450327 797630.7998562268 749173.761523784 696776.206071407 695499.0784157522 765717.8061314734 735248.051927226 0.838691706554706 1.0977686926378658 1.059123639372883 1.4742587203105169 1.0848458527234226 1.0189401516400567 0.9476750115080523 0.9459380090742381 1.0414414619996344 1.0 19.487871531068834 -6.267862907257115 3.9157832868502194 0.9821198910486209 1.1290107588438838 0.1409303144483095 0.14744235591436236 0.4267634008860305 15.221810052090877 0.055204974490505716 0.05126173906950523 5.396809554786606e-07 6.267862907257115 0.14689086779526295 AS(ph)TGPPLIK ddPTM_KYSE-520_SHP099_60min_R1 1 ASTGPPLIK 9 0 A0A087WZ32;A0A087X038;A8K727;Q9HB19;E5RHB5 A0A087WZ32 PLEKHA2 Pleckstrin homology domain-containing family A member 2 1 AS(0.87)T(0.13)GPPLIK 129.88 0.00058361 290870000.0 467840.0 465510.0 414910.0 402400.0 462490.0 453940.0 439740.0 510970.0 567690.0 557080.0 True False 441887.98258408194 443146.2008552442 441655.7624794726 440643.9750140279 498885.33179186226 451106.7920795065 484193.21064882545 509197.56433129444 464611.8063003231 552144.7046016811 0.8003119090001258 0.8025906925521114 0.7998913306577565 0.7980588627249624 0.9035409153326205 0.817008273954083 0.8769317293337513 0.9222176000014908 0.8414674675463845 1.0 19.07468688863702 -13.999999976854227 0.06418871249710471 1.601097659129391 0.6064437905552678 0.7302727912906384 0.03366161228484339 176.25485757870467 0.8199225110797064 16.014002122613903 2.357426822257622 1.000000053295114e-14 13.999999976854227 -0.9946538685741233 AS(ph)WES(ph)LDEEWR ddPTM_KYSE-520_SHP099_60min_R1 1 ASWESLDEEWR 11 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 2 AS(1)WES(1)LDEEWR 115.83 0.00027645 25095000.0 113130.0 115510.0 89877.0 105140.0 123140.0 122800.0 120280.0 147100.0 152680.0 155340.0 True False 106854.45338093607 109960.72621595518 95670.61522828443 115132.47398850642 132830.4174292417 122033.55964965299 132439.07621967682 146589.74443339824 124957.16074958755 153963.8084526914 0.6940231893118528 0.714198533545258 0.6213837926572284 0.747789205434492 0.8627379301938782 0.7926119837906606 0.860196156165957 0.9521052116507044 0.8116008690963452 1.0 17.232231737680895 -6.140441968773187 0.34886060394926044 0.9815699984216812 0.60900544562298 0.7390171962331324 0.056838517810787345 1.0160048482507784 0.24367499255891228 0.06740329634237818 0.14280637216403907 7.236990978232455e-07 6.140441968773187 -0.37256455279870127 AS(ph)WESLDEEWR ddPTM_KYSE-520_SHP099_60min_R1 6 ASWESLDEEWR 11 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 AS(1)WESLDEEWR;AS(1)WESLDEEWR;AS(1)WESLDEEWR;AS(0.99)WES(0.01)LDEEWR;AS(1)WESLDEEWR;AS(0.967)WES(0.033)LDEEWR 233.32 4.4456e-14 682636000.0 1021050.0 938409.0 828816.0 873054.0 1041169.0 987294.0 872300.0 996376.0 1229740.0 992207.0 True False 964410.3210872872 893326.4230593753 882242.8055124882 956028.7896667437 1123103.076858745 981131.9319278861 960480.5968276021 992919.8042119056 1006450.2152226723 983416.8179053654 0.9806730000219427 0.9083904269220464 0.8971199083127607 0.972150132334571 1.1420417633805624 0.9976765843985198 0.9766770095241849 1.0096632334667421 1.0234218053809239 1.0 19.907443502059444 -5.5259598685275675 24.999970952792467 1.0248477236840274 0.9280175262268526 0.4647157252599474 0.04664292824439045 82.78847621484122 671732.5240196293 0.014185556847299968 0.01841269723703219 2.978791675323128e-06 5.5259598685275675 -0.0968301974571748 AS(ph)WIGY(ph)AIAY(ph)HLLK ddPTM_KYSE-520_SHP099_60min_R1 1 ASWIGYAIAYHLLK 14 0 Q6N069-5;Q6N069-4;Q6N069-3;Q6N069-2;Q6N069 Q6N069-5 NAA16 N-alpha-acetyltransferase 16, NatA auxiliary subunit 3 AS(1)WIGY(1)AIAY(1)HLLK 49.626999999999995 0.049483 695150000.0 571730.0 677710.0 453730.0 480390.0 444120.0 669050.0 482930.0 536470.0 689250.0 568500.0 True False 540014.9971845018 645151.7943365517 482978.1617936682 526046.1211654806 479069.71730286506 664874.2107785031 531749.2773426054 534609.1107830395 564099.5745785509 563463.5322863074 0.9583849996349171 1.1449752421754542 0.8571595748777883 0.933593908075999 0.8502231109065633 1.179977359103813 0.9437155146225376 0.9487909689803911 1.0011288082649514 1.0 19.1039627157266 ASAGRLT(ph)PESQSK ddPTM_KYSE-520_SHP099_60min_R1 3 ASAGRLTPESQSK 13 1 A0A0D9SGJ6;J3KQV8;O43426;J3KPK1;C9JFZ1;O43426-4;O43426-2;H7BZ56;H7BZC2 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 AS(0.183)AGRLT(0.817)PESQSK;AS(0.014)AGRLT(0.986)PESQSK;AS(0.001)AGRLT(0.97)PES(0.029)QSK 138.05 4.3199e-05 279910000.0 1902680.0 2216680.0 1854220.0 1371130.0 1677990.0 2186200.0 1519630.0 1912690.0 2568200.0 2009530.0 True False 1797134.5475014525 2110187.365495488 1973745.988056896 1501441.7829547334 1810038.266542905 2172555.114870286 1673249.0305595899 1906055.3248152034 2101879.619053518 1991727.127590685 0.9022995783942435 1.059476138203781 0.990972086846284 0.7538390988182048 0.9087782364707951 1.0907895387749935 0.8400995334052884 0.9569861746678545 1.0553050113827993 1.0 20.925588576851872 -7.643359311009519 5.934674582964874 1.0260348429038875 0.9373842515097975 0.13023001766746112 0.09387144743033357 0.45457882025424573 21.28902390465556 0.06850526300211203 0.024816633219734287 2.2732159206023952e-08 7.643359311009519 -0.08865059139408993 ASAGTPSLSAGVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 ASAGTPSLSAGVSPK 15 0 Q8TEK3;Q8TEK3-1 Q8TEK3 DOT1L Histone-lysine N-methyltransferase, H3 lysine-79 specific 1 ASAGTPSLSAGVS(1)PK;ASAGTPSLSAGVS(1)PK;ASAGTPSLSAGVS(1)PK;ASAGTPSLSAGVS(1)PK 346.99 1.2633000000000001e-54 2113970000.0 2248130.0 2647280.0 1726630.0 1608810.0 1708150.0 2366910.0 1807290.0 2392800.0 2747100.0 2401810.0 True False 2123421.7473639534 2520100.695151706 1837931.332505677 1761710.8186936344 1842571.686955976 2352137.2367293127 1989988.5106506464 2384499.935283716 2248295.888755515 2380531.831979906 0.8919946874215446 1.0586292782549014 0.7720675303791488 0.7400492591726473 0.7740168235530358 0.9880721631741519 0.835942827530081 1.0016668978127083 0.9444510922105968 1.0 21.182852489767473 -7.184616771827 1.3361057231149656 0.9884009172432198 0.8592319859025913 0.21463537814030598 0.09594706289006662 0.8023107113293251 2.5846292190393907 0.08348796929026883 0.03376223017093311 6.537071395136961e-08 7.184616771827 -0.12916893134062846 ASALLFS(ph)S(ph)DEEDQWNIPASQTHLASDSR ddPTM_KYSE-520_SHP099_60min_R1 4 ASALLFSSDEEDQWNIPASQTHLASDSR 28 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;Q9Y4E1-5;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 2 ASALLFS(1)S(1)DEEDQWNIPASQTHLASDSR;ASALLFS(1)S(1)DEEDQWNIPASQTHLASDSR;ASALLFS(1)S(1)DEEDQWNIPASQTHLASDSR;ASALLFS(1)S(1)DEEDQWNIPASQTHLASDSR 156.7 1.4723e-07 536455000.0 240467.0 445840.0 549407.0 761400.0 270125.0 365225.0 249523.0 228492.0 341545.0 367523.0 True False 227127.81615092006 424421.1771805165 584822.6543022806 833763.2270767429 291382.3006989922 362945.49530166533 274747.2199498037 227699.41458243376 279529.03764879383 364267.0321485673 0.6235200995578577 1.1651374945383888 1.6054778574190571 2.288879183380752 0.7999140053392236 0.996372065736756 0.7542467357785684 0.6250892737654226 0.7673739673888115 1.0 18.474636904850964 ASALLFS(ph)SDEEDQWNIPASQTHLASDSR ddPTM_KYSE-520_SHP099_60min_R1 1 ASALLFSSDEEDQWNIPASQTHLASDSR 28 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;Q9Y4E1-5;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 AS(0.001)ALLFS(0.54)S(0.459)DEEDQWNIPASQTHLASDSR 125.26 0.00011376 108090000.0 25211.0 43959.0 49514.0 75446.0 24988.0 30966.0 19584.0 19311.0 25379.0 35747.0 True False 23812.495573117478 41847.14365619579 52705.75166520108 82616.36515633305 26954.41343772852 30772.729707745522 21563.741841421263 19244.014648221295 20770.81335252673 35430.309390745155 0.6720939213513502 1.1811114375175846 1.487589371121001 2.331799145336097 0.7607727367113919 0.8685425060325256 0.6086241472972851 0.5431511883226194 0.5862441990967295 1.0 15.112696443214675 -5.958483886044746 24.999909255875284 0.7000413764092893 1.4236915859935868 0.41403914365175887 0.40209149326972454 148.37270555516716 89345.48677965591 0.13127704498217352 0.1488540465648481 1.1003126702680634e-06 5.958483886044746 0.7236502095842975 ASAPERT(ph)PS(ph)PAPK ddPTM_KYSE-520_SHP099_60min_R1 5 ASAPERTPSPAPK 13 1 Q63ZY6;Q96P11-2;Q3KNT7-3;Q63ZY6-6 Q63ZY6 NSUN5P2;NSUN5 Putative methyltransferase NSUN5C;Probable 28S rRNA (cytosine-C(5))-methyltransferase 2 AS(0.004)APERT(0.996)PS(1)PAPK;AS(0.042)APERT(0.958)PS(1)PAPK;AS(0.402)APERT(0.605)PS(0.993)PAPK;AS(0.001)APERT(0.999)PS(1)PAPK;ASAPERT(1)PS(1)PAPK 159.79 1.9245e-06 5034950000.0 8056550.0 7201710.0 7534020.0 6972270.0 7679540.0 7254700.0 7076780.0 7042660.0 8419990.0 7218730.0 True False 7609637.111165755 6855729.041612911 8019674.984058219 7634912.444510594 8283876.107394489 7209420.726305677 7792169.985117087 7018230.656229209 6891132.066674875 7154777.668286963 1.0635742246603865 0.9582029462635067 1.1208838842896336 1.0671068757806121 1.1578104158445306 1.0076372824638444 1.0890862506679027 0.9809152683160248 0.963151111909364 1.0 22.77047550582979 -7.272655192807387 23.435623385053038 0.9790248599168241 1.065559500832948 0.3533906962178931 0.05263723282707997 368.8651355137077 770740.4990698304 0.02851301289173023 0.013929049075628681 5.337585037479721e-08 7.272655192807387 0.08653464091612384 ASAPERT(ph)PS(ph)PAPKR ddPTM_KYSE-520_SHP099_60min_R1 1 ASAPERTPSPAPKR 14 2 Q63ZY6;Q96P11-2;Q3KNT7-3;Q63ZY6-6 Q63ZY6 NSUN5P2;NSUN5 Putative methyltransferase NSUN5C;Probable 28S rRNA (cytosine-C(5))-methyltransferase 2 ASAPERT(1)PS(1)PAPKR 69.188 0.064929 393910000.0 685940.0 713610.0 698770.0 486300.0 594530.0 507610.0 447840.0 469030.0 814910.0 488150.0 True False 647889.5408125108 679327.1044495523 743813.8322715298 532517.8057885735 641316.1285870309 504441.81770163117 493112.0376972076 467403.0444024248 666942.8862093689 483825.3707749536 1.3390979058720547 1.4040749937554107 1.5373601245427602 1.100640516092879 1.3255115736486098 1.0426113390739633 1.0191942537188146 0.9660573269520265 1.3784785306754626 1.0 18.884126897602354 -5.635553799395873 1.335843435263885 1.0848565578645357 1.419069488527484 0.46330912616565334 0.14340854633162176 0.37748803163727584 1.3960916720250596 0.05301763875867353 0.08516990504680157 2.314441460601451e-06 5.635553799395873 0.3342129306629482 ASAPS(ph)PNAQVACDHCLK ddPTM_KYSE-520_SHP099_60min_R1 10 ASAPSPNAQVACDHCLK 17 0 A0A3B3IUA7;Q14258 A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 1 ASAPS(1)PNAQVACDHCLK;ASAPS(1)PNAQVACDHCLK;ASAPS(1)PNAQVACDHCLK;AS(0.001)APS(0.999)PNAQVACDHCLK;ASAPS(1)PNAQVACDHCLK;AS(0.04)APS(0.96)PNAQVACDHCLK;AS(0.001)APS(0.999)PNAQVACDHCLK;ASAPS(1)PNAQVACDHCLK;ASAPS(1)PNAQVACDHCLK;ASAPS(1)PNAQVACDHCLK 285.4 1.2186e-37 43788890000.0 22913060.0 23508780.0 18116490.0 17250710.0 17613200.0 21251540.0 16896220.0 22405000.0 24370040.0 21111750.0 True False 21642026.885747302 22379382.921401832 19284307.93280888 18890212.29178491 18999258.63460058 21118901.25600148 18604254.808816317 22327282.284366287 19945055.054714963 20924716.319692977 1.0342805395827155 1.0695190596366564 0.9216042711489354 0.9027702934259938 0.907981658834711 1.0092801705572347 0.8891042786232284 1.0670291507538052 0.9531816226317955 1.0 24.31870472823225 -9.982982505075451 16.76677463853417 0.9999999999942857 0.9715159344109585 0.015177501816477812 0.06517245560767385 0.0 0.0 0.06524955720107233 0.01582534213910604 1.0399620583514065e-10 9.982982505075451 -0.028484065583327167 ASAS(ph)PDRIPSLPQETVDQEPK ddPTM_KYSE-520_SHP099_60min_R1 1 ASASPDRIPSLPQETVDQEPK 21 1 A0A494C1R1;A0A2R8Y5U1;Q76L82;Q8IXJ9 A0A494C1R1 ASXH1;ASXL1 Putative Polycomb group protein ASXL1 1 AS(0.001)AS(0.999)PDRIPSLPQETVDQEPK 257.43 1.4389e-35 717620000.0 342900.0 393710.0 302730.0 227840.0 227970.0 342170.0 252570.0 399010.0 413470.0 330020.0 True False 323878.6534457972 374795.58062924165 322244.4601851258 249493.84509740587 245909.94202813212 340034.3901084833 278102.240445658 397625.92743963405 338394.2707304948 327096.2795516747 0.990163061132069 1.145826486143299 0.9851669992297102 0.7627535398426651 0.7517968176378577 1.0395544412016604 0.8502152357918316 1.2156235099482904 1.0345402619507178 1.0 18.31935582449378 -7.252858679132496 24.997753571086868 1.0938114182205863 0.9331356944400088 0.23123006733657314 0.1258821776942756 940.8843796475084 2741043.511406642 0.06532943142363626 0.036944086765905396 5.586519523645717e-08 7.252858679132496 -0.16067572378057748 ASAS(ph)PSTSSTSSRPK ddPTM_KYSE-520_SHP099_60min_R1 7 ASASPSTSSTSSRPK 15 1 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;F5H858 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASAS(0.976)PS(0.023)T(0.001)SSTSSRPK;ASAS(0.682)PS(0.318)T(0.001)SSTSSRPK;ASAS(0.723)PS(0.247)T(0.029)S(0.001)STSSRPK;AS(0.001)AS(0.497)PS(0.474)T(0.026)S(0.002)STSSRPK;ASAS(0.498)PS(0.498)T(0.005)SSTSSRPK;AS(0.009)AS(0.526)PS(0.435)T(0.022)S(0.002)S(0.003)T(0.003)S(0.001)SRPK;AS(0.002)AS(0.858)PS(0.125)T(0.005)S(0.008)S(0.002)TSSRPK 248.75 3.0344e-19 6367480000.0 3984090.0 4018830.0 3316755.0 3034758.0 3129383.0 3190618.0 2930698.0 3532040.0 4487640.0 3240100.0 True False 3763084.5856134887 3825759.3744131876 3530558.334295638 3323180.4878867366 3375647.638346369 3170704.1695623486 3226961.554696161 3519788.177624334 3672797.700198317 3211395.2347596586 1.171791171912578 1.19130754539452 1.099384559110447 1.034808936600868 1.0511467420169487 0.9873291631136286 1.0048472139984561 1.0960308278242046 1.1436766363867354 1.0 21.614768801543917 -4.939042880877263 3.0659204448564656 1.0458975072986796 1.182413256920914 0.5945494288824787 0.044560810064533676 0.1819077661515282 3.4547574256693183 0.013234982216975928 0.031237045063527463 1.1506867681268367e-05 4.939042880877263 0.13651574962223445 ASASRPQPAPADGADPPPAEEPEARPDGEGS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 10 ASASRPQPAPADGADPPPAEEPEARPDGEGSPGK 34 2 P11274;P11274-2 P11274 BCR Breakpoint cluster region protein 1 ASASRPQPAPADGADPPPAEEPEARPDGEGS(0.999)PGK;ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK;ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK;ASASRPQPAPADGADPPPAEEPEARPDGEGS(0.999)PGK;ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK;ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK;ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK;ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK;AS(0.001)AS(0.001)RPQPAPADGADPPPAEEPEARPDGEGS(0.997)PGK;ASASRPQPAPADGADPPPAEEPEARPDGEGS(1)PGK 136.32 1.2376e-06 45477870000.0 22019970.0 21130940.0 18430540.0 17382030.0 18564960.0 19699710.0 17703520.0 19869430.0 24745920.0 19374700.0 True False 20798478.368378073 20115777.924212396 19618602.09830667 19034012.905102108 20025916.731826983 19576756.802653622 19493164.571305066 19800507.58488982 20252684.721878644 19203055.231288526 1.0830817345403476 1.0475300769555005 1.021639622550326 0.9911971129515376 1.042850551155929 1.0194605268205554 1.015107457460407 1.0311123592785296 1.0546595048521186 1.0 24.194832528093873 -4.424409369254995 2.4814510289348184 1.0224975780427377 1.0866728293249341 0.5382273979983283 0.017593959562366143 0.2953052810473898 2.8506805009202054 0.004665765587741783 0.03415217872483885 3.763488824408866e-05 4.424409369254995 0.06417525128219648 ASAVSELS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 14 ASAVSELSPR 10 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR;ASAVSELS(1)PR 233.45 1.8090999999999998e-13 111317820000.0 26219360.0 25153410.0 23155290.0 19467560.0 20562720.0 23396270.0 20412330.0 22730370.0 27095060.0 22241790.0 True False 24764919.83380163 23945002.427561846 24647917.043173917 21317751.049264655 22180889.07812743 23250245.200524326 22475807.52154304 22651523.651778214 22175280.11487897 22044745.044450782 1.1233933431239924 1.086200016343097 1.11808582922933 0.9670218914430525 1.0061758044106262 1.0546842412394786 1.0195539787928174 1.02752486391219 1.0059213690230928 1.0 24.39393145596522 -5.246942988422635 24.99664109226979 1.0146077220596401 1.1069237675717531 0.7917772281980721 0.02290656474427291 378.15538145730926 652065.6756004946 0.0064213232934573145 0.011052826051231925 5.663136264184841e-06 5.246942988422635 0.09231604551211303 ASCGPPS(ph)LPDPTFLPDAER ddPTM_KYSE-520_SHP099_60min_R1 2 ASCGPPSLPDPTFLPDAER 19 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 ASCGPPS(0.998)LPDPT(0.002)FLPDAER;ASCGPPS(1)LPDPTFLPDAER 205.06 1.274e-13 638290000.0 1813240.0 1403950.0 1462950.0 987360.0 909190.0 1133040.0 947060.0 1616590.0 1849580.0 1693500.0 True False 1712655.9625956756 1336502.1346280866 1557254.0978027629 1081198.3975393907 980738.0804165361 1125968.2770801517 1042798.067214892 1610982.4266049431 1513742.8961175133 1678496.9075230611 1.0203509788546603 0.7962493875549331 0.9277670341977484 0.6441467915093766 0.5842954348148309 0.6708193932521034 0.6212689833034827 0.9597768213837532 0.9018443163838332 1.0 20.678738448328506 -9.629592664038897 9.52681097899481 1.0000088874197703 0.781878860875894 0.1473336990582046 0.1485049791964175 0.0 0.0 0.15482424209105602 0.03755039432633081 2.346428559237259e-10 9.629592664038897 -0.21813002654387637 ASDPQS(ph)PPQVSR ddPTM_KYSE-520_SHP099_60min_R1 1 ASDPQSPPQVSR 12 0 Q7L7X3-3;Q7L7X3;Q7L7X3-2 Q7L7X3-3 TAOK1 Serine/threonine-protein kinase TAO1 1 ASDPQS(0.994)PPQVS(0.006)R 90.689 0.0026923999999999997 359490000.0 801300.0 692650.0 650840.0 677400.0 705020.0 777010.0 916920.0 685630.0 922050.0 950590.0 True False 756850.2916480517 659374.0543111536 692794.1877808191 741779.892332263 760501.062984927 772160.3923727755 1009611.2218768384 683251.7095572444 754628.9629889781 942168.5121478284 0.8033067141276954 0.6998472627874198 0.735318766068164 0.7873112747540815 0.8071815743992967 0.8195565680840985 1.0715824280470414 0.7251905585335893 0.8009490375226795 1.0 19.845625591491178 -6.000134190113806 1.7247926829247742 0.8785722951450523 0.7466324661376493 0.2920400053568517 0.09516135382659527 0.5109579487405859 3.0797564344189783 0.0372282001797893 0.041131809976337565 9.99691063575012e-07 6.000134190113806 -0.13193982900740298 ASDSSS(ph)PSCSSGPR ddPTM_KYSE-520_SHP099_60min_R1 3 ASDSSSPSCSSGPR 14 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 ASDSS(0.001)S(0.746)PS(0.232)CS(0.018)S(0.002)GPR;AS(0.025)DS(0.002)S(0.01)S(0.566)PS(0.381)CS(0.015)S(0.001)GPR;ASDSS(0.117)S(0.829)PS(0.012)CS(0.035)S(0.007)GPR 143.05 6.0639e-06 486150000.0 819296.0 839430.0 733884.0 597456.0 628510.0 794786.0 645823.0 819425.0 924210.0 769312.0 True False 773848.0176539148 799102.5227898821 781191.3368959178 654238.038608303 677970.1612672783 789825.445763102 711109.0914650835 816582.6059302319 756396.7614381462 762496.4941956786 1.0148873123281836 1.0480081270836759 1.0245179392201134 0.8580210448028717 0.8891452831956124 1.0358414127480697 0.93260637508268 1.0709329316872547 0.9920003137011578 1.0 19.540371178795585 -9.117536070534745 11.632053621321905 0.9999998400988689 0.984028098040269 0.004231724080803301 0.06671619592480185 0.0 0.0 0.0689425014054528 0.016721012669939764 7.628935260455208e-10 9.117536070534745 -0.015971742058599858 ASEAAS(ph)PLPDS(ph)PGDKLVIVK ddPTM_KYSE-520_SHP099_60min_R1 4 ASEAASPLPDSPGDKLVIVK 20 1 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 2 ASEAAS(1)PLPDS(1)PGDKLVIVK;ASEAAS(1)PLPDS(1)PGDKLVIVK;ASEAAS(1)PLPDS(1)PGDKLVIVK;ASEAAS(1)PLPDS(1)PGDKLVIVK 212.94 6.982899999999999e-19 3484640000.0 3096290.0 3000070.0 2660180.0 2691570.0 3219660.0 3792440.0 3779910.0 4454960.0 5397460.0 4190670.0 True False 2924532.6213989113 2855942.1340031205 2831659.4592384933 2947376.0035499716 3473028.924640503 3768769.975225806 4162020.1911665974 4439506.783555486 4417417.32289408 4153543.9240919207 0.704105379609846 0.6875916533439593 0.6817453988662397 0.7096051125050639 0.8361603941385555 0.9073624943185746 1.0020407312958728 1.0688479199184309 1.063529699847787 1.0 21.985911380457654 -6.264398125386333 1.1416072694440935 1.051916824724235 0.6840329374914992 0.9738817033505481 0.024810297303358767 0.06748567486623377 0.18217020090367286 0.01312727575039545 0.011802611034172957 5.440037264106158e-07 6.264398125386333 -0.3678838872327358 ASEAAS(ph)PLPDSPGDKLVIVK ddPTM_KYSE-520_SHP099_60min_R1 3 ASEAASPLPDSPGDKLVIVK 20 1 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 AS(0.008)EAAS(0.992)PLPDSPGDKLVIVK;ASEAAS(1)PLPDSPGDKLVIVK;ASEAAS(1)PLPDSPGDKLVIVK 209.76 8.107399999999999e-19 2319795000.0 2124920.0 2577820.0 2156360.0 1734610.0 1659150.0 3345170.0 2345590.0 3199450.0 5208960.0 3480270.0 True False 2007046.4516769983 2453977.6578132967 2295362.415897987 1899466.812870486 1789715.66572784 3324291.553202194 2582705.1279523727 3188351.854707243 4263144.171195777 3449437.515409089 0.5818474585236749 0.7114138600427047 0.6654309305921045 0.5506598697281279 0.5188427555892652 0.9637198929831743 0.7487322545821139 0.9243106565822565 1.235895461840301 1.0 21.71792969646436 -6.982972682253206 1.0174906142231688 1.0965653523074919 0.620511308940202 0.6970627887812526 0.12167071960331247 0.3163666238661634 0.6109976414429116 0.09937327256819342 0.047260563833068564 1.0399855803586911e-07 6.982972682253206 -0.47605404336728985 ASEAASPLPDS(ph)PGDKLVIVK ddPTM_KYSE-520_SHP099_60min_R1 2 ASEAASPLPDSPGDKLVIVK 20 1 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 ASEAASPLPDS(1)PGDKLVIVK;ASEAASPLPDS(1)PGDKLVIVK 261.06 2.0477999999999998e-35 669310000.0 1072920.0 960270.0 808670.0 734130.0 720030.0 910430.0 713910.0 804780.0 1030580.0 916230.0 True False 1013402.9887870062 914137.1878053447 860798.1621177483 803901.4944757676 776692.2645897098 904747.6686631395 786078.9898901684 801988.4060170633 843452.6508076373 908112.9150161546 1.1159438127459937 1.0066338367064 0.9478977205190782 0.8852439836311179 0.8552815974166528 0.9962942423817909 0.8656181152056236 0.8831373199915304 0.9287971097654005 1.0 19.792512168214888 -4.436420094441908 1.6263555783689136 0.9105438832076875 1.1505350960747334 0.6267960511855842 0.04754654447838717 0.4285952896775758 1.431933406894593 0.013067138064447372 0.14628784895999575 3.6608328978749196e-05 4.436420094441908 0.23999121286704583 ASEDTTS(ph)GSPPKK ddPTM_KYSE-520_SHP099_60min_R1 1 ASEDTTSGSPPKK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 ASEDT(0.001)T(0.02)S(0.568)GS(0.411)PPKK 99.991 0.001508 25891000000.0 447510.0 399690.0 379340.0 329910.0 366100.0 375160.0 380130.0 371340.0 473560.0 382910.0 True False 422685.72821093205 380488.2924530787 403792.86336545943 361264.54720894166 394909.9871759405 372818.4872814635 418557.25011128845 370051.9082114077 387573.44147612446 379517.7152994724 1.1137443949813945 1.0025573961754077 1.0639631487210863 0.9519043055048764 1.040557452935556 0.9823480492531881 1.1028661726133402 0.9750583261163571 1.0212262190983508 1.0 18.533807704420607 -4.2561028174945195 24.118773063332306 1.0168168948327252 1.1137444633814058 0.3266250349852303 0.0422397556840933 409.2237134868443 1849402.1808913792 0.009795070787851896 0.08165476616605359 5.544944230639263e-05 4.2561028174945195 0.09692756854868056 ASEDTTSGS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 8 ASEDTTSGSPPK 12 0 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 ASEDTT(0.001)S(0.002)GS(0.997)PPK;ASEDT(0.001)T(0.001)S(0.001)GS(0.997)PPK;ASEDTTSGS(1)PPK;ASEDTTS(0.003)GS(0.997)PPK;ASEDTTS(0.001)GS(0.999)PPK;ASEDTTSGS(1)PPK;ASEDTTS(0.003)GS(0.997)PPK;ASEDTTS(0.001)GS(0.998)PPK 261.02 1.5579e-21 6802700000.0 9842600.0 10947280.0 7870540.0 6970370.0 7753950.0 10259590.0 8056470.0 9963420.0 11365150.0 10060550.0 True False 9296611.357263336 10421356.236597722 8377887.60170925 7632831.869081833 8364141.751059502 10195556.09320833 8870896.61117011 9928859.221499698 9301525.252116675 9971421.35398946 0.9323255960439242 1.0451224420907907 0.8401899091705063 0.7654707988072351 0.8388113844685842 1.0224777121798385 0.8896321092299402 0.995731588208061 0.9328183938787457 1.0 23.249367734348578 -6.255152117176599 24.978132256086322 0.9629589443677788 0.8842524204909169 0.22901315451386373 0.0765372540420091 936.5816613257257 3720870.737080318 0.02820769050632859 0.027530416267281213 5.557095788165765e-07 6.255152117176599 -0.07870652387686194 ASEDTTSGS(ph)PPKK ddPTM_KYSE-520_SHP099_60min_R1 11 ASEDTTSGSPPKK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 ASEDT(0.003)T(0.003)S(0.01)GS(0.983)PPKK;ASEDT(0.027)T(0.002)S(0.001)GS(0.969)PPKK;AS(0.008)EDT(0.089)T(0.089)S(0.204)GS(0.609)PPKK;ASEDT(0.001)T(0.017)S(0.327)GS(0.655)PPKK;ASEDTTSGS(1)PPKK;AS(0.001)EDT(0.114)T(0.099)S(0.065)GS(0.722)PPKK;ASEDT(0.019)T(0.014)S(0.067)GS(0.899)PPKK;ASEDT(0.001)T(0.036)S(0.159)GS(0.804)PPKK;ASEDT(0.002)T(0.007)S(0.037)GS(0.954)PPKK;ASEDTT(0.004)S(0.351)GS(0.644)PPKK;ASEDT(0.002)T(0.179)S(0.064)GS(0.755)PPKK 270.16 2.6307e-22 89153240000.0 11252840.0 10690640.0 9530130.0 8114916.0 9001237.0 10200040.0 9082299.0 9969090.0 12170220.0 10022874.0 True False 10628622.533219589 10177045.6074222 10144457.428547133 8886155.176801547 9709583.141867252 10136377.766847271 10000426.417616341 9934509.553593095 9960414.834279843 9934079.134037973 1.069915227149927 1.0244578757734806 1.021177432922627 0.8945122196937373 0.9774014290462503 1.020364105226034 1.0066787552910703 1.000043327574636 1.0026510459486508 1.0 23.243954808532326 -4.598527442541143 2.1885932446461123 0.9873838442797225 1.0660519030988924 0.35414163929460063 0.034105509976519045 0.43443065686439036 3.6675307502470567 0.010013192158629015 0.05071912488523124 2.5204179124587316e-05 4.598527442541143 0.07866805881916994 ASEENLLSSSSVPSADRDS(ph)SPTTNSK ddPTM_KYSE-520_SHP099_60min_R1 1 ASEENLLSSSSVPSADRDSSPTTNSK 26 1 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 ASEENLLSSSSVPSADRDS(0.716)S(0.283)PT(0.001)TNSK 189.79 1.9565e-15 698730000.0 573760.0 543690.0 514620.0 449510.0 416640.0 554380.0 496290.0 533650.0 694180.0 590160.0 True False 541932.3890377964 517570.316304672 547793.228621113 492231.29524989054 449427.1976426768 550919.9087831803 546459.8365236399 531798.8927048468 568134.4108537383 584931.6415375317 0.926488414292807 0.8848389786953634 0.9365081143177724 0.8415193508014506 0.7683414021873181 0.9418534913499476 0.9342285452146747 0.9091641739656586 0.9712834295651355 1.0 19.157908507376863 -6.468830803856722 24.999988745525066 0.9449485523815413 0.8723074814637051 0.3947361158434076 0.04908239575942377 383.4924464677357 177385.20110413557 0.018183122574434555 0.01603590743810452 3.3975761247417147e-07 6.468830803856722 -0.07264107091783623 ASEENLLSSSSVPSADRDSS(ph)PTTNSK ddPTM_KYSE-520_SHP099_60min_R1 1 ASEENLLSSSSVPSADRDSSPTTNSK 26 1 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 ASEENLLSSSSVPSADRDS(0.249)S(0.75)PT(0.001)TNSK 221.31 6.9842e-22 2236600000.0 995600.0 989790.0 814760.0 691800.0 703970.0 751530.0 706810.0 846740.0 1209300.0 887750.0 True False 940372.0833206037 942239.0026949218 867280.7332620918 757548.4640027457 759368.4339586106 746839.4225041012 778261.2526008459 843802.8565706025 989721.6039722038 879885.2256590495 1.0687440314914352 1.0708658075138928 0.9856748448213609 0.8609628186850491 0.8630312361363158 0.8487918659444535 0.8845031487122819 0.9589919593644494 1.124830347311361 1.0 19.746955821855323 -4.925060165265289 3.6890852941483354 0.9238422317423153 1.0692882064135258 0.3079386475812991 0.07908902744174122 0.2649339041257088 7.133391563126148 0.022794512747106584 0.051778081027208246 1.1883375889211838e-05 4.925060165265289 0.14544597467121056 ASEKPVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 12 ASEKPVSPK 9 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E7EUY6;E7EU80 B1ALK7 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 ASEKPVS(1)PK;ASEKPVS(1)PK;ASEKPVS(1)PK;ASEKPVS(1)PK;ASEKPVS(1)PK;ASEKPVS(1)PK;ASEKPVS(1)PK;ASEKPVS(1)PK;ASEKPVS(1)PK;ASEKPVS(1)PK;ASEKPVS(1)PK;ASEKPVS(1)PK 184.65 1.0157000000000001e-05 81590310000.0 36835700.0 32511300.0 30406620.0 28924210.0 29870530.0 30073250.0 30010790.0 31196860.0 38067100.0 31191480.0 True False 34792350.290852554 30949408.347543806 32366679.377512153 31673158.22201918 32221170.770932954 29885551.691644307 33044573.53028526 31088645.374061838 31155074.23349902 30915147.753804266 1.1254143298270725 1.0011082138119596 1.0469521166538585 1.024519063413554 1.0422454075759018 0.966696065295911 1.0688796894467036 1.0056120585817423 1.0077608065018946 1.0 24.881810564947216 -4.255054822980395 24.95385056338321 1.020194520313073 1.125414377972248 0.5758960980186163 0.027554663227093525 515.4240090722059 2014465.696157869 0.006454601110057921 0.060850741303179634 5.5583408736043336e-05 4.255054822980395 0.10521985765917519 ASEPLLS(ph)PPPFGESR ddPTM_KYSE-520_SHP099_60min_R1 6 ASEPLLSPPPFGESR 15 0 O14686-3;O14686 O14686-3 KMT2D Histone-lysine N-methyltransferase 2D 1 ASEPLLS(0.992)PPPFGES(0.008)R;ASEPLLS(1)PPPFGESR;ASEPLLS(1)PPPFGESR;ASEPLLS(1)PPPFGESR;ASEPLLS(1)PPPFGESR;ASEPLLS(1)PPPFGESR 150.57 3.5581e-05 652247000.0 660819.0 832491.0 724578.0 622312.0 732710.0 884247.0 738830.0 1043330.0 1243629.0 984072.0 True False 624162.0527599821 792496.8827655333 771285.4572457912 681456.3453750752 790370.1084503781 878728.0864782303 813518.1466859309 1039710.9317450518 1017817.3229358715 975353.8876764318 0.6399339364370733 0.8125224011291784 0.790774986382851 0.6986759923605744 0.8103418855829474 0.9009325718397541 0.8340748491031914 1.0659832752827147 1.0435364392308926 1.0 19.89556624136349 -6.797223989618152 0.9496593179126612 1.0492527007955532 0.7432836260208113 0.7784468517881313 0.06350501096782638 0.261316360654033 0.45947116241985214 0.048475308156243936 0.02697546896999154 1.5950562765567436e-07 6.797223989618152 -0.3059690747747419 ASES(ph)PARGPSGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 ASESPARGPSGSPR 14 1 O43237;O43237-2;J3KRZ2 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 2 AS(0.084)ES(0.939)PARGPS(0.377)GS(0.6)PR;AS(0.024)ES(0.976)PARGPS(0.2)GS(0.8)PR 118.05 0.0022402 141082000.0 420250.0 368930.0 364080.0 289710.0 365490.0 331940.0 234814.0 275586.0 451300.0 323670.0 True False 396937.89475239423 351206.0490247801 387549.1793485963 317243.95129551255 394251.9836463661 329868.23933310923 258551.29068379774 274630.0564882556 369355.2963471894 320802.5356114494 1.2373277972876084 1.0947732952153313 1.2080614593956618 0.9889072437998216 1.2289553226096612 1.028259451579398 0.8059515184036784 0.8560719632867332 1.1513478085302489 1.0 18.291326019283282 -6.518904647454042 24.31188486854316 0.9378854641885682 1.1411516219795586 0.4196060989701236 0.1096767868586441 111.96912700155055 684993.3308763759 0.04028647298490926 0.03198665992238624 3.0275780821571577e-07 6.518904647454042 0.20326615779099033 ASES(ph)S(ph)SEEKDDYEIFVK ddPTM_KYSE-520_SHP099_60min_R1 5 ASESSSEEKDDYEIFVK 17 1 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 2 AS(0.004)ES(0.916)S(0.916)S(0.165)EEKDDYEIFVK;AS(0.029)ES(0.903)S(0.903)S(0.161)EEKDDY(0.003)EIFVK;AS(0.011)ES(0.987)S(0.901)S(0.101)EEKDDYEIFVK;AS(0.089)ES(0.91)S(0.874)S(0.126)EEKDDYEIFVK;AS(0.007)ES(0.992)S(0.924)S(0.077)EEKDDYEIFVK 187.86 2.014e-12 905060000.0 1771000.0 1638410.0 1534100.0 1520300.0 1618070.0 1633410.0 1557490.0 1572280.0 1960870.0 1574590.0 True False 1672759.0995990285 1559698.324296452 1632990.5406467884 1664788.8549051364 1745402.9034410666 1623215.2823073263 1714936.2888375828 1566826.1276529103 1604825.4375101118 1560640.3576124818 1.0718414985487557 0.9993963802669624 1.0463592926335636 1.066734463699237 1.1183889324195362 1.0400956725164878 1.0988670647099936 1.0039636102002973 1.0283121474349324 1.0 20.573706682509204 -7.285482960833858 24.780622974329187 1.0121033989495025 1.0613855658478981 0.36908363714208325 0.03128796043942621 883.6796263294035 910762.7281458019 0.01780816868004076 0.008560195055378469 5.182234236535272e-08 7.285482960833858 0.049282166898395596 ASES(ph)SSEEKDDYEIFVK ddPTM_KYSE-520_SHP099_60min_R1 1 ASESSSEEKDDYEIFVK 17 1 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 AS(0.061)ES(0.901)S(0.019)S(0.019)EEKDDYEIFVK 146.6 5.094e-06 495520000.0 300830.0 307730.0 311910.0 319290.0 293790.0 256640.0 271790.0 302830.0 399110.0 270620.0 True False 284142.36021026236 292946.18888785294 332016.2176736451 349635.22560196073 316909.6015635612 255038.21456422575 299265.1856147817 301779.5534110536 326641.68474435306 268222.5173391741 1.0593531185562515 1.092175973120911 1.237838720504596 1.3035267473828016 1.1815175128000943 0.9508456526851679 1.1157347585264563 1.1251089446358666 1.2178011301389229 1.0 18.033070831328466 ASESSKPWPDATYGTGS(ph)ASR ddPTM_KYSE-520_SHP099_60min_R1 6 ASESSKPWPDATYGTGSASR 20 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ASESSKPWPDATYGT(0.008)GS(0.981)AS(0.011)R;ASESSKPWPDATYGT(0.003)GS(0.957)AS(0.04)R;ASESSKPWPDATYGT(0.001)GS(0.922)AS(0.077)R;ASESSKPWPDATYGT(0.019)GS(0.931)AS(0.05)R;ASESSKPWPDATYGT(0.098)GS(0.901)AS(0.001)R;ASESSKPWPDAT(0.003)YGT(0.154)GS(0.767)AS(0.077)R 254.33 2.9326000000000003e-27 8230500000.0 6556680.0 5088720.0 5362470.0 5302580.0 4963250.0 5162350.0 4952800.0 5145290.0 6348210.0 5167510.0 True False 6192967.889982461 4844250.25287556 5708143.396455367 5806535.608921187 5353829.537970468 5130129.858773501 5453477.358669892 5127442.189909716 5195535.089351191 5121729.881661942 1.2091555066494282 0.9458230646290267 1.1144952053978958 1.133705943710767 1.04531665309792 1.0016400664044456 1.0647725445646308 1.0011153083781763 1.014410210884706 1.0 22.28819973700714 -5.971020186336561 8.620873250612515 1.0198954396554212 1.0906898656991482 0.27553679800158815 0.0636900949205856 0.382775839467266 101.5984033698101 0.019208736165405495 0.0216633184414295 1.0690051898967135e-06 5.971020186336561 0.07079442604372699 ASET(ph)PPPVAQPKPEAPHPGLETTLQER ddPTM_KYSE-520_SHP099_60min_R1 6 ASETPPPVAQPKPEAPHPGLETTLQER 27 1 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 AS(0.062)ET(0.938)PPPVAQPKPEAPHPGLETTLQER;AS(0.001)ET(0.999)PPPVAQPKPEAPHPGLETTLQER;AS(0.091)ET(0.909)PPPVAQPKPEAPHPGLETTLQER;ASET(1)PPPVAQPKPEAPHPGLETTLQER;AS(0.005)ET(0.995)PPPVAQPKPEAPHPGLETTLQER;AS(0.009)ET(0.991)PPPVAQPKPEAPHPGLETTLQER 231.34 2.761e-23 11813990000.0 4798660.0 5354060.0 4067430.0 3950200.0 3648110.0 4576920.0 3758670.0 4873490.0 5994610.0 5368170.0 True False 4532468.76390845 5096842.920992099 4329623.045918104 4325625.820329066 3935195.5020934762 4548353.744557726 4138633.044684176 4856585.000671122 4906139.935820571 5320612.190173056 0.8518697852626295 0.9579429469424121 0.8137452780179569 0.812994006275878 0.7396132928766382 0.8548553403231195 0.7778490325470544 0.9127868799836657 0.9221006456516418 1.0 22.34316082123749 -7.759927883686447 1.71107720803353 0.9913488995330867 0.8315670112436929 0.4820538191988818 0.056359942567633985 0.3165351470354607 1.8207029097894107 0.05614398317304544 0.016748391661395596 1.7380894213990924e-08 7.759927883686447 -0.15978188828939377 ASEYS(ph)PASLDAFGAFLK ddPTM_KYSE-520_SHP099_60min_R1 4 ASEYSPASLDAFGAFLK 17 0 P17029;E9PC66;B3KRF7 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 ASEYS(1)PASLDAFGAFLK;AS(0.002)EYS(0.998)PASLDAFGAFLK;AS(0.009)EY(0.003)S(0.985)PAS(0.003)LDAFGAFLK;AS(0.053)EY(0.002)S(0.944)PASLDAFGAFLK 227.67 1.3819999999999998e-18 142684000.0 548370.0 682900.0 507882.0 394812.0 434706.0 552940.0 467874.0 568310.0 683210.0 596760.0 True False 517950.8229515068 650092.4589462026 540620.8863599321 432334.813775444 468914.8890611979 549488.8963573212 515171.26993020496 566338.6652545513 559156.2863225426 591473.1706722545 0.8756962253466477 1.0991072650130906 0.914024360133656 0.7309457727119937 0.7927914778082668 0.9290174493169064 0.8709968523926003 0.9575052484812863 0.9453620452251768 1.0 19.173953203583544 -9.009783529039892 11.377975224341487 1.0 0.9011978975142891 0.09032827194207438 0.09355625543408863 0.0 0.0 0.09855693788731423 0.023903568532166807 9.77724439233303e-10 9.009783529039892 -0.09880210248571086 ASGDGES(ph)LDEDSEFTLASDFEIGHFFR ddPTM_KYSE-520_SHP099_60min_R1 1 ASGDGESLDEDSEFTLASDFEIGHFFR 27 0 Q99733;Q99733-2;H0YCI4 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 1 AS(0.023)GDGES(0.977)LDEDSEFTLASDFEIGHFFR 169.65 2.2012e-10 30163000.0 7044.9 10249.0 9570.7 7455.5 7969.6 5542.0 6056.0 10337.0 7853.8 4028.0 True False 6654.1053533400245 9756.622655937364 10187.642635661436 8164.068478422187 8596.762179178855 5507.410322299478 6668.199580864343 10301.14335967394 6427.747898186476 3992.3150537365777 1.666728518109352 2.4438508796558343 2.5518132959287336 2.0449459445293745 2.153327596511397 1.3795029320506302 1.670258857607766 2.5802430973058255 1.6100302234841093 1.0 11.963009860179048 -6.098910330053127 8.690591126425554 1.7482914998237642 2.2074986372235057 0.24927666894359257 0.43665038760515523 0.5702632807222876 45.8400126705104 0.14493532041181517 0.14508594259379964 7.963237525461526e-07 6.098910330053127 0.4592071373997415 ASGDPGASGMS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 ASGDPGASGMSPR 13 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 ASGDPGAS(0.001)GMS(0.999)PR;ASGDPGASGMS(1)PR;ASGDPGASGMS(1)PR;ASGDPGASGMS(1)PR;ASGDPGASGMS(1)PR;ASGDPGASGMS(1)PR 185.2 3.145e-08 3447530000.0 6046180.0 5780440.0 5107780.0 4688920.0 4927540.0 5676350.0 4711250.0 5317110.0 6233390.0 5280580.0 True False 5710786.342638983 5502738.985782668 5437035.671536952 5134553.5470247995 5315309.364132575 5640921.794114875 5187509.127369079 5298666.186432808 5101563.506974538 5233798.169429073 1.0911361420079257 1.0513854007448156 1.0388317423654205 0.981037743682214 1.0155740042058965 1.0777874139403836 0.9911557456819081 1.0123940616171698 0.974734474243404 1.0 22.319426860240867 -1.0000000000001934 0.556339976105516 1.0070378266156523 5.065885442881839 0.48090168744154294 0.027435261647965562 129.60007574966698 1.1653285083095883 0.013992451906897027 629.9963405241301 0.09999999999995547 1.0000000000001934 4.058847616266187 ASGQAFELILS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 47 ASGQAFELILSPR 13 0 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;AS(0.228)GQAFELILS(0.772)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;AS(0.04)GQAFELILS(0.96)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR;ASGQAFELILS(1)PR 205.33 3.3748e-09 446348966000.0 17092697.5 18588782.6 16774948.6 14857736.4 17958057.2 32333569.0 33583481.0 46124989.0 54847784.0 42840896.0 True False 16144531.496227285 17695749.581564486 17856288.627622746 16269811.200314673 19371254.134271536 32131763.2023426 36978427.0026693 45964992.178812325 44888809.025718175 42461358.99115274 0.3802170227192013 0.4167494871101883 0.420530313957763 0.3831674630033545 0.4562090002420256 0.7567295057380896 0.8708724327540749 1.0825134491901118 1.0571684489672415 1.0 25.339647210170355 -6.5489427139011 1.4031720847285503 1.0511593121719147 0.3942086957892866 0.9815074186005498 0.03878912707730104 0.04975352109311723 0.1992818822151357 0.020883943158891943 0.014836107915212123 2.8252526184416526e-07 6.5489427139011 -0.6569506163826282 down ASGS(ph)ENEGDYNPGR ddPTM_KYSE-520_SHP099_60min_R1 2 ASGSENEGDYNPGR 14 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 ASGS(1)ENEGDYNPGR;AS(0.012)GS(0.988)ENEGDYNPGR 191.15 8.1635e-09 148750000.0 594400.0 582200.0 538150.0 538010.0 574390.0 505880.0 553300.0 560470.0 631140.0 534160.0 True False 561427.4470929771 554230.2380999838 572840.0100704435 589142.3086413946 619591.2251679559 502722.6152733417 609232.9636876225 558525.8603846809 516540.8857446599 529427.7579701914 1.060442031308429 1.0468477138880747 1.081998443501892 1.1127907439159344 1.1703036265862754 0.9495584764968947 1.1507386126171426 1.054961421981444 0.9756588655741449 1.0 19.014074311952605 -7.6439949817617565 4.765245705686656 0.9890114397486246 1.0813682347372036 0.2918945848608615 0.05755411013161293 0.2625927332562913 9.494338170740324 0.04169814767118546 0.014464209782763212 2.2698910801434283e-08 7.6439949817617565 0.09235679498857896 ASHSAVDITK ddPTM_KYSE-520_SHP099_60min_R1 1 ASHSAVDITK 10 0 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 0 56.358999999999995 0.042872 0.0 38807.0 44173.0 32858.0 34890.0 44602.0 38125.0 37027.0 40463.0 43378.0 35073.0 False True 36654.29835016344 42050.862774975256 34976.07925465884 38205.93510993902 48111.92364933433 37887.0477332493 40770.05050869614 40322.64329713518 35501.64867039305 34762.28050638108 1.0544273222648626 1.2096692783793703 1.0061503084712327 1.0990629657604256 1.3840266791617064 1.089889592436107 1.1728243922665618 1.1599539129699337 1.0212692652277588 1.0 15.085235109783612 -7.7966772275954686 5.691155217501381 1.005272372787069 1.1497896389726552 0.23821942418348108 0.09753947418316887 0.27418436868849166 22.538549298006565 0.08982853194989997 0.024638926805413346 1.5970656629183906e-08 7.7966772275954686 0.14451726618558625 ASIANSDGPTAGSQT(ph)PPFK ddPTM_KYSE-520_SHP099_60min_R1 3 ASIANSDGPTAGSQTPPFK 19 0 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;H9KVA6 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASIANSDGPTAGSQT(1)PPFK;ASIANSDGPTAGS(0.203)QT(0.797)PPFK;ASIANSDGPT(0.001)AGS(0.026)QT(0.973)PPFK 202.61 3.7289e-09 577020000.0 1130740.0 1482320.0 1024790.0 917790.0 955730.0 1372910.0 944820.0 1275060.0 1477630.0 1256460.0 True False 1068015.598125693 1411107.1221923202 1090849.6031219743 1005016.4856563748 1030940.5136401568 1364341.1594348927 1040331.6261545967 1270637.1144612422 1209329.6400210448 1245328.7419110872 0.8576174002751364 1.133120175181076 0.8759531249940891 0.807029061349754 0.8278460770591954 1.0955670687734778 0.8353871481020337 1.0203226438918584 0.9710926916897477 1.0 20.24809520456522 -6.238520053473134 24.974820194115367 0.9764261893549773 0.9067111185615441 0.1379288176188035 0.1036200553905986 2090.5578523846334 2278048.4477731925 0.03535201175580044 0.03532995521668818 5.774042105581475e-07 6.238520053473134 -0.0697150707934332 ASIANSDGPTAGSQT(ph)PPFKR ddPTM_KYSE-520_SHP099_60min_R1 2 ASIANSDGPTAGSQTPPFKR 20 1 J3KP75;O75167-5;O75167-2;O75167;O75167-4;F6TH74;H9KVA6 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 ASIANSDGPT(0.002)AGS(0.161)QT(0.837)PPFKR;ASIANSDGPTAGS(0.061)QT(0.939)PPFKR 141.21 3.9761e-06 1933040000.0 828000.0 814490.0 597840.0 529700.0 506590.0 659000.0 543270.0 647450.0 791450.0 702280.0 True False 782069.189422922 775360.6778255851 636377.7229778212 580042.5287398882 546455.7508971859 654886.9365563624 598189.0334042546 645204.1470659659 647742.6308308952 696058.3455655726 1.1235684399236137 1.11393058177555 0.9142591666805479 0.8333245803820981 0.7850717606915133 0.9408506351924322 0.8593949590794783 0.9269397474743503 0.9305866885405717 1.0 19.40884871632996 -4.778496740244448 4.68137647738519 0.8882863204142017 1.1233445654383007 0.6998031164040148 0.057535816254643476 0.0914413060750761 4.960216240947511 0.015265832396088584 0.0371011042491671 1.6653413275645332e-05 4.778496740244448 0.235058245024099 ASIDS(ph)SLENLSTASSR ddPTM_KYSE-520_SHP099_60min_R1 1 ASIDSSLENLSTASSR 16 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ASIDS(0.598)S(0.402)LENLSTASSR 150.92 2.912e-06 281760000.0 667560.0 708350.0 615040.0 526380.0 528360.0 659130.0 542960.0 721630.0 782060.0 740930.0 True False 630529.1160521318 674319.8027449738 654686.4624987934 576406.9969380825 569938.9260428306 655016.1251781407 597847.6955789467 719126.8339597083 640057.6181282582 734365.9366348174 0.8586034354227936 0.9182340426014298 0.891498951461243 0.7849043211064893 0.7760966265054959 0.8919478593733638 0.8141005263922557 0.9792486253584403 0.8715785771073196 1.0 19.48613961572155 -7.821872885418241 0.9334195399358309 0.9900521376185244 0.8490086258484822 0.37998750628193256 0.05605480431399722 0.5849061389085278 1.1161880563664297 0.054977639857763605 0.019476564971640825 1.5070481027755046e-08 7.821872885418241 -0.14104351177004215 ASIDSS(ph)LENLSTASSR ddPTM_KYSE-520_SHP099_60min_R1 6 ASIDSSLENLSTASSR 16 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ASIDS(0.124)S(0.876)LENLSTASSR;ASIDS(0.175)S(0.825)LENLSTASSR;ASIDS(0.099)S(0.901)LENLSTASSR;ASIDS(0.081)S(0.919)LENLSTASSR;ASIDS(0.01)S(0.99)LENLSTASSR;ASIDS(0.429)S(0.571)LENLSTASSR 400.27 9.988099999999997e-87 4171580000.0 3989320.0 4410430.0 3675610.0 2804660.0 3370900.0 3889680.0 3281730.0 4068380.0 5042030.0 4657940.0 True False 3768024.467087741 4198546.322609603 3912545.7017839323 3071214.043148226 3636170.652202619 3865403.0643164674 3613479.2949983384 4054267.7393470304 4126524.45123292 4616674.275422486 0.8161772397821845 0.909430917611224 0.8474814267519195 0.6652438227011738 0.7876168937367499 0.8372700419638621 0.7827018064140248 0.8781792904321829 0.8938305379699523 1.0 22.13842251747717 -7.939047470177321 1.2165033765444733 0.9975692234611625 0.8064997643767002 0.5022089235766076 0.059843043542979264 0.41892749073351654 1.3915289171914218 0.061649868887870135 0.01943044393497246 1.150674608591846e-08 7.939047470177321 -0.19106945908446227 ASIGQS(ph)PGLPSTTFK ddPTM_KYSE-520_SHP099_60min_R1 4 ASIGQSPGLPSTTFK 15 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ASIGQS(0.994)PGLPS(0.002)T(0.004)TFK;ASIGQS(1)PGLPSTTFK;ASIGQS(1)PGLPSTTFK;ASIGQS(1)PGLPSTTFK 335.61 3.0469e-54 1548100000.0 2887270.0 3301460.0 2379590.0 1995780.0 2346560.0 3507650.0 2746130.0 4050300.0 4420260.0 3971170.0 True False 2727107.377469952 3142852.9060075106 2532982.17887862 2185458.3311468614 2531220.9218999622 3485757.455253298 3023735.620046071 4036250.4546471303 3617652.209686745 3935988.52332351 0.6928646669851592 0.7984913795820006 0.6435440967037664 0.5552501787534385 0.6430966215731301 0.8856116918526883 0.7682277532386853 1.025473125932532 0.9191216357084383 1.0 21.908294583352852 -6.783015778658834 1.2706934430100139 0.9790506903533827 0.6706548306186452 0.7024894040091094 0.08332648648520295 0.2701813786233923 0.8736373188843983 0.05719466001932832 0.032290399185325724 1.6481025120641035e-07 6.783015778658834 -0.3083958597347375 ASIPENSIIPEETLTVDKPS(ph)TPER ddPTM_KYSE-520_SHP099_60min_R1 1 ASIPENSIIPEETLTVDKPSTPER 24 1 A4FU49;A4FU49-3;A4FU49-6 A4FU49 SH3D21 SH3 domain-containing protein 21 1 ASIPENSIIPEETLTVDKPS(0.5)T(0.5)PER 124.82 8.4205e-05 156110000.0 109660.0 145090.0 104580.0 114920.0 100030.0 107020.0 72725.0 146170.0 161190.0 133170.0 True False 103576.94119820968 138119.65861547014 111321.39413391623 125841.96224804211 107901.79190715465 106352.04848294666 80076.75272760229 145662.9703863345 131921.95926922985 131990.2174046922 0.7847319538889369 1.0464386022790204 0.8434064002834106 0.9534188572642541 0.8174984027514662 0.8057570521068471 0.6066870280399704 1.1035891390323314 0.9994828545872224 1.0 17.010071481105875 -7.317107832866375 24.999874262788957 1.038652101302602 0.8477042805580651 0.3978376082389007 0.11075259896968742 335.5987781851244 150710.61564284662 0.062144588290592245 0.029853316248275894 4.818281475645006e-08 7.317107832866375 -0.19094782074453687 ASLENSLR ddPTM_KYSE-520_SHP099_60min_R1 3 ASLENSLR 8 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;; 121.58 0.0070108 1111840000.0 1170390.0 1364630.0 1102550.0 889090.0 1201840.0 1292700.0 960610.0 1055760.0 1283480.0 1191660.0 False True 1105466.1335853783 1299071.126448609 1173622.137142374 973588.8462853445 1296417.970465809 1284631.7797972818 1057717.8334501474 1052097.8149762372 1050432.3858978294 1181102.8194974517 0.9359609640553935 1.099879794547736 0.9936663580582589 0.8243049040384117 1.097633456685357 1.0876544857829404 0.8955340855931548 0.8907758051275292 0.8893657423870842 1.0 20.171703131622525 -6.791561008169484 24.998745307497266 0.9098168251919482 1.0060356911807904 0.20284298265693435 0.08430057510518743 329.5118509536753 273467.7847117675 0.036345342176161755 0.024507422264684903 1.6159912013705719e-07 6.791561008169484 0.09621886598884222 ASLGS(ph)LEGEAEAEASS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 12 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 ASLGS(1)LEGEAEAEAS(0.001)S(0.999)PK;ASLGS(1)LEGEAEAEASS(1)PK;ASLGS(1)LEGEAEAEASS(1)PK;AS(0.003)LGS(0.997)LEGEAEAEAS(0.011)S(0.989)PK;ASLGS(1)LEGEAEAEASS(1)PK;ASLGS(1)LEGEAEAEASS(1)PK;ASLGS(1)LEGEAEAEAS(0.001)S(0.999)PK;ASLGS(1)LEGEAEAEAS(0.002)S(0.998)PK;ASLGS(1)LEGEAEAEASS(1)PK;AS(0.08)LGS(0.92)LEGEAEAEAS(0.067)S(0.933)PK;AS(0.001)LGS(0.999)LEGEAEAEAS(0.011)S(0.989)PK;AS(0.001)LGS(0.999)LEGEAEAEAS(0.056)S(0.944)PK 495.42 4.277299999999999e-157 13531000000.0 10275240.0 10387170.0 9741170.0 10566410.0 10945830.0 10148790.0 10118600.0 10973020.0 13449550.0 10096450.0 True False 9705251.954016885 9888154.761739971 10369101.40462307 11570638.429492978 11807204.547746595 10085447.637107484 11141486.836019475 10934957.15474213 11007450.755564678 10007003.307919241 0.9698459823967921 0.9881234628867148 1.0361844685728518 1.1562540826119567 1.1798941385782025 1.0078389430656192 1.113368957038561 1.0927304426979187 1.0999747293831423 1.0 23.254506674342696 -4.962062089618495 3.662014808712707 1.0978548685737004 0.9803573199799488 0.42005444278160853 0.05338585609398666 0.2039977523972267 5.794680495029692 0.01447805475782674 0.03184995225179289 1.091284308055726e-05 4.962062089618495 -0.11749754859375161 ASLGS(ph)LEGEAEAEASSPK ddPTM_KYSE-520_SHP099_60min_R1 10 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGS(1)LEGEAEAEASSPK;AS(0.002)LGS(0.998)LEGEAEAEASSPK;ASLGS(0.999)LEGEAEAEAS(0.001)SPK;ASLGS(1)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;ASLGS(1)LEGEAEAEASSPK;AS(0.001)LGS(0.999)LEGEAEAEASSPK 425.67 1.5992999999999995e-125 20652890000.0 10004910.0 12614430.0 9219940.0 8403540.0 9147340.0 12003800.0 8455590.0 10731460.0 12918440.0 11407740.0 True False 9449917.698006375 12008413.84815454 9814272.084825577 9202209.91498358 9867183.616754895 11928879.831616478 9310363.555805922 10694235.070001597 10572776.943371126 11306676.29868741 0.8357821032785218 1.0620639992628598 0.8680068152269393 0.8138740043395302 0.8726864868237516 1.0550297467171055 0.8234394714993972 0.9458336638896339 0.935091503822261 1.0 23.430671562406467 ASLGSLEGEAEAEASS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 17 ASLGSLEGEAEAEASSPK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.001)S(0.999)PK;ASLGSLEGEAEAEAS(0.03)S(0.97)PK;ASLGSLEGEAEAEAS(0.001)S(0.999)PK;ASLGSLEGEAEAEAS(0.037)S(0.963)PK;ASLGSLEGEAEAEAS(0.057)S(0.943)PK;ASLGSLEGEAEAEAS(0.003)S(0.997)PK;ASLGSLEGEAEAEAS(0.131)S(0.869)PK;ASLGSLEGEAEAEASS(1)PK;ASLGSLEGEAEAEAS(0.031)S(0.969)PK;ASLGSLEGEAEAEAS(0.039)S(0.961)PK;ASLGSLEGEAEAEASS(1)PK;ASLGSLEGEAEAEAS(0.096)S(0.904)PK;ASLGSLEGEAEAEASS(1)PK;ASLGSLEGEAEAEASS(1)PK;ASLGSLEGEAEAEAS(0.002)S(0.998)PK;ASLGSLEGEAEAEAS(0.049)S(0.951)PK;ASLGSLEGEAEAEAS(0.422)S(0.578)PK 399.65 3.565299999999999e-87 51304800000.0 18917520.0 23541220.0 16095900.0 14715720.0 16079250.0 21018740.0 17114580.0 23568890.0 27397720.0 23666120.0 True False 17868127.45445881 22410264.455108404 17133467.46835056 16114297.604357442 17344595.496582203 20887554.247154273 18844688.768604536 23487135.021610253 22422984.68831669 23456456.588762775 0.7617573177279832 0.95539854326695 0.7304371571859087 0.6869877188559366 0.7394380063735387 0.8904820797682128 0.8033902604723516 1.001307888628932 0.9559408346040985 1.0 24.48348175567161 -7.143692284251506 1.4994408297725765 0.9965240977354014 0.7852041670404116 0.5548758013095431 0.0767552781276982 0.34354070667264786 1.42858559795467 0.06088309393628741 0.025730818989860602 7.183030586755956e-08 7.143692284251506 -0.21131993069498978 ASLGSLEGEAEAEASS(ph)PKGK ddPTM_KYSE-520_SHP099_60min_R1 3 ASLGSLEGEAEAEASSPKGK 20 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ASLGSLEGEAEAEAS(0.024)S(0.976)PKGK;ASLGSLEGEAEAEAS(0.236)S(0.764)PKGK;ASLGSLEGEAEAEAS(0.109)S(0.891)PKGK 168.25 4.0766e-09 1160350000.0 784360.0 1227260.0 1121980.0 442710.0 655640.0 708050.0 512200.0 588320.0 1577950.0 783920.0 True False 740849.9872171052 1168300.587445183 1194304.626031471 484785.0252943848 707235.137918693 703630.7973121887 563978.174590276 586279.2552349197 1291434.056882444 776975.0786805315 0.9535054695386442 1.5036525874539055 1.5371208920364003 0.6239389635477789 0.9102417275979151 0.9056027878102642 0.7258639177308371 0.7545663578174815 1.6621306040800858 1.0 19.56750879965846 -5.252654245843214 24.889057012147333 0.9184711580507627 1.348648942224863 0.2549435570188513 0.3043530005488177 780.9399269506964 2212466.3868400618 0.082120628854721 0.13952904515510656 5.589149857329996e-06 5.252654245843214 0.43017778417410035 ASLLT(ph)DEEDVDMALDQR ddPTM_KYSE-520_SHP099_60min_R1 3 ASLLTDEEDVDMALDQR 17 0 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 ASLLT(1)DEEDVDMALDQR;ASLLT(1)DEEDVDMALDQR;AS(0.004)LLT(0.996)DEEDVDMALDQR 230.93 1.9052e-18 344787000.0 127449.0 140575.0 92761.0 98582.0 92898.0 130571.0 105361.0 116700.0 142395.0 120716.0 True False 120379.14990671717 133821.56599262307 98740.52248284775 107951.20364024094 100208.54408268392 129756.05795614685 116011.91810426823 116295.19493798487 116539.65748583643 119646.55015562677 1.006123032800674 1.1184740873728374 0.825268445721284 0.902250867240439 0.8375380982764699 1.0844947705334624 0.9696219235186397 0.9719895374059451 0.974032743395032 1.0 16.86841927377773 -6.270252030378655 24.986691101480332 0.9963767642230683 0.9397198312893325 0.1187966769746267 0.08419878271677453 1803.6754676394962 5113980.846534115 0.03168567231099458 0.028324992580078142 5.367202357415586e-07 6.270252030378655 -0.05665693293373586 ASLQAMS(ph)LEEAKMHR ddPTM_KYSE-520_SHP099_60min_R1 2 ASLQAMSLEEAKMHR 15 1 Q5TAP6 Q5TAP6 UTP14C U3 small nucleolar RNA-associated protein 14 homolog C 1 AS(0.005)LQAMS(0.995)LEEAKMHR;ASLQAMS(1)LEEAKMHR 47.559 0.06498999999999999 0.0 383470.0 471650.0 325800.0 278769.0 324920.0 438710.0 341070.0 448080.0 549130.0 482120.0 True False 362198.1546715073 448991.2260389167 346801.58929843124 305263.12194504373 350489.3554580897 435971.8481587882 375548.68412242417 446525.7150626586 449421.8344407978 477848.79188368394 0.7579764997285421 0.9396094196848118 0.7257559194224107 0.6388278617210561 0.7334733526822527 0.9123636086641206 0.7859153156838758 0.9344498147676601 0.9405105591439776 1.0 18.86619464554948 -7.297597676241011 0.9836203870584752 0.9934563985493569 0.7700983904536479 0.49495040712840066 0.08232955103890346 0.5153187040151128 0.8899299815800698 0.07941276972189834 0.03177224963182131 5.0396726015926406e-08 7.297597676241011 -0.22335800809570894 ASLS(ph)LIEK ddPTM_KYSE-520_SHP099_60min_R1 4 ASLSLIEK 8 0 P52292 P52292 KPNA2 Importin subunit alpha-1 1 ASLS(1)LIEK;AS(0.001)LS(0.999)LIEK;ASLS(1)LIEK;AS(0.008)LS(0.992)LIEK 152.54 0.00036743 675368000.0 1117720.0 1206270.0 1063970.0 841120.0 959180.0 1127370.0 951680.0 1142690.0 1310790.0 1248360.0 True False 1055717.84348042 1148318.9785518167 1132555.2086121903 921059.7919080514 1034662.0090123442 1120333.665653333 1047885.1019017473 1138726.2750958507 1072783.5783269051 1237300.5016093836 0.8532428800499353 0.9280841453294274 0.9153436914791929 0.7444107480034227 0.8362253209034805 0.9054661047951494 0.8469123713590517 0.9203312159129369 0.8670355963902967 1.0 20.238764497715795 -8.875597603021717 0.6310487101758244 1.0057707034493595 0.8623136987109129 0.37598016288064706 0.05149038834404556 4.08147260536164 2.060673768937692 0.11590273640862225 0.021894240259080093 1.33168772616247e-09 8.875597603021717 -0.14345700473844658 ASLS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 2 ASLSLR 6 0 Q9UM82 Q9UM82 SPATA2 Spermatogenesis-associated protein 2 1 AS(0.003)LS(0.997)LR;AS(0.008)LS(0.992)LR 96.19 0.013437000000000001 703410000.0 621140.0 594880.0 569110.0 499470.0 537190.0 510340.0 552200.0 575190.0 635100.0 600000.0 True False 586684.1259881083 566301.0718669156 605795.7412081962 546939.4786288693 579463.7968070019 507154.7787589889 608021.7649526565 573194.8001403547 519781.8495681362 594684.4667929359 0.9865469147900021 0.9522715044516151 1.018684319224247 0.9197137459776783 0.9744054690582096 0.8528132263047252 1.0224275206508202 0.9638637498496094 0.8740464541999209 1.0 19.18176486733023 -5.273234548702013 24.82356457293296 0.9431383538514245 0.9824779744959835 0.12063643601845375 0.05162181028579042 1504.3278147831722 3165932.9026871254 0.014119476132841879 0.021119007803650596 5.330469359592835e-06 5.273234548702013 0.03933962064455898 ASLSPDASDFEHITAETPS(ph)RPLSSTSNPFK ddPTM_KYSE-520_SHP099_60min_R1 1 ASLSPDASDFEHITAETPSRPLSSTSNPFK 30 1 Q5M775-4;Q5M775;Q5M775-5;Q5M775-3;Q5M775-2 Q5M775-4 SPECC1 Cytospin-B 1 ASLSPDASDFEHITAET(0.058)PS(0.273)RPLS(0.167)S(0.167)T(0.167)S(0.167)NPFK 119.89 0.00014633 310110000.0 107760.0 144400.0 110460.0 253330.0 93523.0 127270.0 119490.0 125170.0 157760.0 135690.0 True False 101782.33798576564 137462.80725118096 117580.42834224881 277406.4070335582 100882.72802692014 126475.66072159054 131569.21531001967 124735.81448489772 129114.76080596626 134487.8921652226 0.7568141365523287 1.0221203190715753 0.8742826320587845 2.0626868528265403 0.7501249845077692 0.9404241429125174 0.9782978466818615 0.9274873185733021 0.9600474713912885 1.0 17.037116768412194 ASLSPDASDFEHITAETPSRPLS(ph)S(ph)TSNPFK ddPTM_KYSE-520_SHP099_60min_R1 1 ASLSPDASDFEHITAETPSRPLSSTSNPFK 30 1 Q5M775-4;Q5M775;Q5M775-5;Q5M775-3;Q5M775-2 Q5M775-4 SPECC1 Cytospin-B 2 ASLSPDASDFEHITAETPS(0.006)RPLS(0.499)S(0.499)T(0.498)S(0.498)NPFK 81.297 0.012913999999999998 995150000.0 67567.0 83244.0 80861.0 124390.0 86434.0 81038.0 71201.0 83335.0 121850.0 65151.0 True False 63818.923818524825 79244.83328820855 86073.42944217443 136211.98820078268 93235.8640578127 80532.21178248027 78398.6919347956 83045.93033553526 99725.11158853324 64573.81282671104 0.9883096726809052 1.2271976799769957 1.3329463705846103 2.1093998052479632 1.4438649349701334 1.2471342214001653 1.2140942048007095 1.286062053643876 1.5443584205899923 1.0 15.978661594551484 -6.255559052891683 22.356848596042415 1.2734439286013226 1.4430388842067972 0.06699769755581575 0.29360927501949674 366.3045552377839 1392677.3807477625 0.10570437059472475 0.10271420846890522 5.551891205303599e-07 6.255559052891683 0.16959495560547455 ASLSPDASDFEHITAETPSRPLS(ph)ST(ph)SNPFK ddPTM_KYSE-520_SHP099_60min_R1 1 ASLSPDASDFEHITAETPSRPLSSTSNPFK 30 1 Q5M775-4;Q5M775;Q5M775-5;Q5M775-3;Q5M775-2 Q5M775-4 SPECC1 Cytospin-B 2 ASLSPDASDFEHITAETPSRPLS(0.948)S(0.164)T(0.567)S(0.321)NPFK 207.48 2.8886e-17 494120000.0 302420.0 384600.0 375140.0 743750.0 370010.0 346770.0 375140.0 339040.0 444290.0 368550.0 True False 285644.15974067646 366123.23870363086 399322.1246452222 814435.7763834095 399127.6819310839 344605.67980219965 413062.8122135812 337863.94937253074 363618.1356394702 365284.9337275608 0.7819762967659583 1.0022949344434098 1.0931798379153717 2.2295903859830073 1.0926475336887667 0.9433887028563179 1.130796192436599 0.9249326160944777 0.9954369919638302 1.0 18.478662725030308 -5.985525362497376 24.999817844793508 1.0041902363873474 1.296177128783518 0.1169180127286924 0.35907370983739695 550.9955108835809 951644.4839605892 0.11903588826552813 0.1349195358719924 1.033890720716276e-06 5.985525362497376 0.2919868923961706 ASLSPDASDFEHITAETPSRPLSS(ph)TSNPFK ddPTM_KYSE-520_SHP099_60min_R1 1 ASLSPDASDFEHITAETPSRPLSSTSNPFK 30 1 Q5M775-4;Q5M775;Q5M775-5;Q5M775-3;Q5M775-2 Q5M775-4 SPECC1 Cytospin-B 1 ASLSPDASDFEHITAET(0.008)PS(0.008)RPLS(0.209)S(0.259)T(0.259)S(0.259)NPFK 95.56 0.0017629999999999998 300200000.0 73146.0 64002.0 51866.0 64431.0 56513.0 48952.0 58219.0 60730.0 61553.0 60550.0 True False 69088.44556706412 60927.24785103944 55209.365348534135 70554.5028681134 60960.251585014834 48646.47241017756 64104.34468268512 60519.341804488555 50376.52682485828 60013.57410718714 1.151213647826887 1.01522445142528 0.9199479646042668 1.1756424095338773 1.015774389242955 0.8105911559823551 1.0681640884809105 1.0084275550127724 0.839418874384708 1.0 15.873001231641316 -6.008355238888214 24.979805766162503 0.9490423429451271 1.0570421645527968 0.2520436846618581 0.097456215644647 637.0985125670668 1904749.4639971675 0.030935334255698964 0.03348199343602135 9.809452331859903e-07 6.008355238888214 0.10799982160766963 ASLT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 7 ASLTPVK 7 0 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 AS(0.001)LT(0.999)PVK;AS(0.026)LT(0.974)PVK;ASLT(1)PVK;AS(0.073)LT(0.927)PVK;ASLT(1)PVK;ASLT(1)PVK;ASLT(1)PVK 133.13 0.0090229 4374070000.0 8990500.0 10073680.0 7594090.0 5984860.0 6719910.0 9495400.0 6562240.0 8193370.0 10151770.0 9573190.0 True False 8491779.042882573 9589725.291898044 8083617.192373601 6553659.294986233 7248728.685942295 9436135.686460217 7225615.260490614 8164949.111816925 8308464.473296052 9488378.984429115 0.8949662589171438 1.0106810981765424 0.8519492323861857 0.6907037867839282 0.763958595861085 0.994493970144465 0.7615226238694929 0.8605209725724486 0.8756463550761031 1.0 23.177730204422783 -9.514346509964177 14.25707652514198 1.0000128145177354 0.8543282034478351 0.17177015603472945 0.09476026928343256 0.0 0.0 0.0969853737673917 0.023522408246056725 3.0595213633287594e-10 9.514346509964177 -0.14568461106990027 ASLVALPEQT(ph)ASEEETPPPLLTK ddPTM_KYSE-520_SHP099_60min_R1 1 ASLVALPEQTASEEETPPPLLTK 23 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 AS(0.002)LVALPEQT(0.492)AS(0.492)EEET(0.013)PPPLLTK 62.684 0.032987999999999996 10891000.0 19909.0 27316.0 19427.0 17742.0 17091.0 23469.0 17877.0 21618.0 24875.0 23106.0 True False 18804.60808239244 26003.698357848094 20679.29550429901 19428.194345673197 18435.964465512163 23322.521265616484 19684.181622706703 21543.012203679136 20358.32704772067 22901.29881619597 0.8211153539070754 1.135468279181532 0.902974790655736 0.8483446507380373 0.8050182923456775 1.0183929502340112 0.8595225004787023 0.9406895380293347 0.888959495752403 1.0 14.483141800690404 -4.922853620715535 24.999999968266206 0.9022026938968063 0.9885248489909412 0.07746265034472888 0.09407792995003367 68.0750232466964 22056.899638819472 0.023153453572172848 0.04819777148031585 1.194390606888386e-05 4.922853620715535 0.08632215509413488 ASLVALPEQTAS(ph)EEET(ph)PPPLLTK ddPTM_KYSE-520_SHP099_60min_R1 2 ASLVALPEQTASEEETPPPLLTK 23 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 ASLVALPEQT(0.006)AS(0.994)EEET(1)PPPLLTK;ASLVALPEQT(0.048)AS(0.952)EEET(1)PPPLLTK 165.53 2.7091000000000005e-10 183604000.0 246201.0 244604.0 240795.0 231524.0 242384.0 236061.0 224998.0 216219.0 302485.0 230236.0 True False 232543.73974047424 232852.85668191055 256317.03098562214 253527.97134977128 261458.24182369097 234587.6557366183 247742.9936088694 215468.98675489385 247561.34902632295 228196.28816089773 1.0190513685152984 1.0204059783730117 1.1232305005982257 1.1110083051439144 1.1457602747654718 1.0280082013043705 1.085657420659663 0.9442265187195769 1.0848614191821175 1.0 17.799915799387605 -7.213670479137391 24.99235313651385 1.010907840974825 1.077991533571611 0.25437088633307836 0.05206815582377595 540.1251067036936 282590.151415941 0.025054968012900313 0.014465475862197031 6.114057529652557e-08 7.213670479137391 0.06708369259678615 ASLVALPEQTAS(ph)EEETPPPLLTK ddPTM_KYSE-520_SHP099_60min_R1 4 ASLVALPEQTASEEETPPPLLTK 23 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 ASLVALPEQT(0.25)AS(0.75)EEETPPPLLTK;ASLVALPEQT(0.088)AS(0.912)EEETPPPLLTK;ASLVALPEQT(0.003)AS(0.997)EEETPPPLLTK;ASLVALPEQT(0.081)AS(0.918)EEET(0.001)PPPLLTK 238.59 1.9662999999999998e-28 658750000.0 670180.0 945840.0 662240.0 545260.0 561091.0 874610.0 611930.0 807200.0 871470.0 878680.0 True False 633003.7794292922 900400.4266652163 704929.0500214648 597081.3464616028 605245.6695289153 869151.2345698924 673789.8562612805 804400.011601897 713233.0159709393 870895.5788026954 0.726842338893882 1.0338787434230452 0.8094300478486746 0.6855946464700952 0.6949692756059288 0.9979970684485492 0.7736746777238263 0.9236469115020467 0.8189650209862013 1.0 19.732140223140895 -6.259908215830378 24.985554274369456 0.8900107847754593 0.7989471494381601 0.19312118148978785 0.11297508245442064 309.98660975471546 5058388.39317386 0.03956200156742065 0.03761907233539004 5.496570265723952e-07 6.259908215830378 -0.09106363533729911 ASMSEFLES(ph)EDGEVEQQR ddPTM_KYSE-520_SHP099_60min_R1 6 ASMSEFLESEDGEVEQQR 18 0 J3QQW9;Q15022 J3QQW9 SUZ12 Polycomb protein SUZ12 1 ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR;ASMSEFLES(1)EDGEVEQQR 292.2 5.8973e-38 1824150000.0 2429690.0 2373020.0 2182920.0 1920680.0 1908900.0 2276300.0 1919290.0 2244550.0 2801420.0 2332110.0 True False 2294910.252233068 2259016.5572243626 2323634.515995494 2103220.849726503 2059119.5698447218 2262092.767349386 2113310.5636653095 2236764.179931908 2292752.7460512803 2311449.319754126 0.9928447198129279 0.9773160665554455 1.0052716692238202 0.9099143259391156 0.8908348334731193 0.9786469242553023 0.9142794287568923 0.9676890428944545 0.9919113200782466 1.0 21.14036630008278 -9.998574697690085 13.613052086356506 0.9999999990801182 0.9567669789430717 0.09499532876731298 0.03775861807515984 0.0 0.0 0.038547386434753285 0.00934911439281362 1.0032872711157149e-10 9.998574697690085 -0.04323302013704644 ASNGDAWVEAHGK ddPTM_KYSE-520_SHP099_60min_R1 2 ASNGDAWVEAHGK 13 0 P38646;D6RJI2;A0A3B3ITI4 P38646 HSPA9 Stress-70 protein, mitochondrial 0 ; 126.48 0.00010573 389640000.0 667260.0 722790.0 496940.0 544840.0 746860.0 721040.0 499205.0 605960.0 671940.0 626010.0 False True 630245.7576501676 688066.0834700915 528973.5475321132 596621.4297878814 805633.6329478914 716539.721903793 549669.5131712987 603858.0661921272 549932.6342289617 620464.0384284098 1.0157651670619527 1.1089540099905109 0.8525450546206749 0.9615729403094497 1.298437271221234 1.1548448862866185 0.8859006793747006 0.9732362051500287 0.8863247507815294 1.0 19.242988069829554 -6.773461551917778 24.999198581420018 0.9341350857586673 1.0635394285230115 0.23039170400637166 0.11543563074013506 389.86761786341907 810692.49352924 0.05257853654497245 0.035760686493219944 1.6847615720819662e-07 6.773461551917778 0.1294043427643442 ASPGTPLS(ph)PGSLR ddPTM_KYSE-520_SHP099_60min_R1 1 ASPGTPLSPGSLR 13 0 E1P5H9;Q96BD0-2;Q96BD0-3;Q96BD0-4;Q96BD0 E1P5H9 SLCO4A1 Solute carrier organic anion transporter family member 4A1 1 ASPGTPLS(0.999)PGS(0.001)LR 105.41 0.0012014 0.0 118860.0 122910.0 105720.0 112460.0 103310.0 127170.0 114130.0 176480.0 168780.0 133040.0 True False 112266.59885846438 117005.21910832863 112534.88035798063 123148.16458766803 111439.90924650754 126376.28485868366 125667.3742014609 175867.83207074154 138133.8065975596 131861.36910355388 0.8513987047282873 0.8873350845951071 0.8534332771079018 0.9339214769638622 0.8451293203166359 0.9584026445185576 0.953026462987589 1.3337327927531857 1.0475684238427694 1.0 17.008662440346896 -7.06186006773309 7.596336020481645 1.1444372443929207 0.8921990297930695 0.5932519752697618 0.08811658401979247 0.1796454850486135 19.701824825501777 0.03901807501009414 0.02257201756631274 8.672412610419678e-08 7.06186006773309 -0.2522382145998512 ASPITNDGEDEFVPS(ph)DGLDKDEYTFSPGK ddPTM_KYSE-520_SHP099_60min_R1 2 ASPITNDGEDEFVPSDGLDKDEYTFSPGK 29 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 ASPITNDGEDEFVPS(1)DGLDKDEYTFSPGK;ASPITNDGEDEFVPS(0.995)DGLDKDEY(0.001)T(0.003)FS(0.001)PGK 98.14399999999999 2.5385e-06 0.0 594890.0 649530.0 518920.0 531100.0 539970.0 526050.0 562360.0 567770.0 694120.0 540300.0 True False 561890.2658161863 618325.6038355932 552370.4135013565 581575.5843189629 582462.5669909659 522766.7268216609 619208.8369047011 565800.5383885142 568085.3053412616 535513.3623470397 1.0492553600409564 1.1546408499044827 1.0314783016439326 1.0860150748994242 1.0876713971023204 0.9761973530043898 1.1562901702225359 1.05655727414295 1.0608237726346659 1.0 19.03056304857442 -13.99999999981625 0.22381400757299677 0.6144502065908217 1.0832381672111075 0.16061374131923023 0.05091873819788277 286.4249924908635 2.868002223506053 49.8435978291355 0.09080334830795037 1.0000000004230999e-14 13.99999999981625 0.4687879606202858 ASPITNDGEDEFVPSDGLDKDEYTFS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 2 ASPITNDGEDEFVPSDGLDKDEYTFSPGK 29 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 ASPITNDGEDEFVPSDGLDKDEY(0.002)T(0.106)FS(0.891)PGK;ASPITNDGEDEFVPS(0.001)DGLDKDEY(0.026)T(0.21)FS(0.763)PGK 77.286 0.0016225999999999999 0.0 517050.0 518590.0 451430.0 401330.0 471960.0 507720.0 426330.0 452470.0 560670.0 493460.0 True False 488368.2057863788 493676.1579805409 480529.9001135384 439472.2825357359 509100.566914933 504551.13115082897 469427.5969798375 450900.48717729235 458866.4613405242 489088.3283060705 0.9985276227666569 1.0093803703931354 0.9825012626611357 0.8985540179579077 1.04091743239544 1.0316155629767592 0.9598012665844494 0.9219203589236333 0.9382077526359747 1.0 18.899735510783195 -6.98466266983823 24.396128344829403 0.9462105885551841 0.9919691241501117 0.17088484695613704 0.04083788226582668 290.179653400508 461568.70669494127 0.017831442971912637 0.012016783411873318 1.03594650644318e-07 6.98466266983823 0.045758535594927596 ASPS(ph)KPASAPASR ddPTM_KYSE-520_SHP099_60min_R1 2 ASPSKPASAPASR 13 1 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-4;B5MEG9;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 AS(0.353)PS(0.647)KPASAPASR;AS(0.163)PS(0.826)KPAS(0.01)APASR 184.66 5.0297000000000004e-08 7079000000.0 4410300.0 4184200.0 4348100.0 3645800.0 4013700.0 4036200.0 4313600.0 4014100.0 4975300.0 4022600.0 True False 4165651.8672849173 3983184.75138776 4628385.483205975 3992295.735850259 4329555.3551709205 4011008.578647633 4749660.784679067 4000176.0239979876 4071910.9371065185 3986962.8935354436 1.044818318735598 0.9990523758939895 1.160879999839113 1.0013375700896194 1.085928179113722 1.0060310782302935 1.1912979657724632 1.0033140841325532 1.0213064545217643 1.0 21.926858747631197 ASPS(ph)PQPSSQPLQIHR ddPTM_KYSE-520_SHP099_60min_R1 9 ASPSPQPSSQPLQIHR 16 0 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 AS(0.067)PS(0.932)PQPS(0.002)SQPLQIHR;AS(0.001)PS(0.999)PQPSSQPLQIHR;AS(0.003)PS(0.997)PQPSSQPLQIHR;AS(0.181)PS(0.818)PQPSSQPLQIHR;AS(0.007)PS(0.993)PQPSSQPLQIHR;AS(0.004)PS(0.996)PQPSSQPLQIHR;AS(0.03)PS(0.97)PQPSSQPLQIHR;ASPS(1)PQPSSQPLQIHR;AS(0.005)PS(0.995)PQPSSQPLQIHR 273.44 3.3016e-29 18786180000.0 5988862.0 6605331.0 5381511.0 5335647.0 4644057.0 5695361.0 5050041.0 5179043.0 6332716.0 5052196.0 True False 5656647.886359584 6288000.983956042 5728411.809782044 5842745.286659228 5009517.864830202 5659814.139412105 5560548.427930608 5161078.10863073 5182854.409179232 5007437.473989009 1.1296492299190712 1.255732301525258 1.1439806966213988 1.166813428427055 1.0004154601733921 1.1302815399716617 1.1104578852586215 1.0306824868887137 1.0350312781939708 1.0 22.25564107107775 -5.728654359730962 0.3310196905888137 1.0000239937067072 1.2477844284834572 0.5434186546034456 0.052989602777658115 2.0891024916906886 0.3754203639773024 0.062463234066585056 0.1939723811247437 1.8678656704602308e-06 5.728654359730962 0.24776043477674992 ASPS(ph)TAGETPSGVK ddPTM_KYSE-520_SHP099_60min_R1 1 ASPSTAGETPSGVK 14 0 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 ASPS(0.999)T(0.001)AGETPSGVK 330.24 2.5830000000000006e-44 393850000.0 475340.0 451170.0 389580.0 353300.0 368160.0 495780.0 384110.0 527250.0 543600.0 504300.0 True False 448971.94263320195 429495.1159800237 414692.9501500394 386877.5257764814 397132.09745614434 492685.6531197464 422939.5873523453 525421.0928110747 444895.94304084225 499832.2943394633 0.8982451668644698 0.8592784436780113 0.829664179058424 0.774014664834225 0.7945306895004874 0.9857019218232762 0.8461629873501211 1.051194768248073 0.8900904324895206 1.0 18.931084591904312 -6.261516817515018 24.999999984600336 0.9510505072478421 0.8294531494053305 0.4985835528988791 0.06185314220747069 6.22967753221591 2010968.0804817572 0.02083136970640168 0.019549773542811053 5.476248944566549e-07 6.261516817515018 -0.12159735784251158 ASPSCS(ph)SPTR ddPTM_KYSE-520_SHP099_60min_R1 1 ASPSCSSPTR 10 0 Q8N5I9;A0A087WT30;J3KN91 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 AS(0.01)PS(0.129)CS(0.769)S(0.091)PTR 89.266 0.008631100000000001 619570000.0 469250.0 515970.0 396290.0 338210.0 361870.0 461800.0 406770.0 423180.0 500400.0 450770.0 True False 443219.76707331627 491182.02671324066 421835.4874864184 370353.3767134557 390347.1102413487 458917.7349039875 447890.2812926338 421712.08735095453 409539.9740574639 446776.5284937534 0.9920390593650291 1.0993908484163086 0.9441755790273487 0.8289454639930437 0.8736965470351613 1.0271751214218137 1.0024928632724626 0.94389937800157 0.9166550790798534 1.0 18.7691938699377 -4.8122770185287775 10.8720424769978 0.9387570462219036 1.045621903381618 0.30879491052365504 0.06182828872386383 0.5940127201489561 124.70378363516082 0.017507928017733397 0.03656376688534362 1.5407173794134815e-05 4.8122770185287775 0.1068648571597145 ASPSCSS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 6 ASPSCSSPTR 10 0 Q8N5I9;A0A087WT30;J3KN91 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 ASPS(0.001)CS(0.028)S(0.97)PTR;ASPS(0.004)CS(0.281)S(0.709)PT(0.006)R;ASPSCS(0.005)S(0.995)PTR;ASPSCS(0.003)S(0.997)PTR;ASPS(0.006)CS(0.127)S(0.867)PTR;ASPSCS(0.025)S(0.973)PT(0.001)R 208.33 6.1243000000000005e-09 2862174000.0 2999400.0 2992580.0 2569960.0 2108880.0 2108620.0 2766570.0 2177250.0 2591560.0 3115820.0 2795260.0 True False 2833017.3028443335 2848811.964845845 2735623.7336813845 2309307.321142109 2274556.3975933664 2749302.810422966 2397347.6779123005 2582570.483234653 2550065.6314303107 2770496.171079375 1.02256676346194 1.0282677863207292 0.9874129270554436 0.833535647963885 0.8209924349786081 0.9923503375035699 0.8653134781190847 0.9321689415035334 0.9204364395265757 1.0 21.401712942513086 -5.057523518321698 6.393310901391347 0.9044309659655284 1.0215998482427489 0.4248140420820826 0.056099636640405695 0.19469479566400666 17.124174223364076 0.015213024899103244 0.02708871357592201 8.75944281393277e-06 5.057523518321698 0.11716888227722044 ASPTPLAS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 4 ASPTPLASPGK 11 0 A0A1B0GTL5 A0A1B0GTL5 1 ASPTPLAS(1)PGK;ASPTPLAS(1)PGK;ASPTPLAS(1)PGK;ASPTPLAS(1)PGK 147.96 6.5027e-05 3459960000.0 4629600.0 5881200.0 3829510.0 3614500.0 3808840.0 6290700.0 4603800.0 6191500.0 7437800.0 7071000.0 True False 4372786.859121205 5598658.32413882 4076366.3420326407 3958020.9932609485 4108574.038664877 6251437.407883313 5069197.03275813 6170023.131606959 6087283.0116798645 7008356.441154747 0.6239389928062382 0.7988546774336645 0.5816436958165029 0.5647573759260447 0.5862393091964253 0.8919976402988545 0.7233075365560163 0.880380897206527 0.8685749737176438 1.0 22.740644720805673 -6.263283468521578 24.984401938559994 0.8560294795201026 0.6339754356955132 0.6512226422909179 0.08802335394791595 117.89984151263492 1597339.74160045 0.031029897630617986 0.028782690786682767 5.454017554933107e-07 6.263283468521578 -0.22205404382458938 ASPVTTS(ph)PTAATTQNPVLSK ddPTM_KYSE-520_SHP099_60min_R1 2 ASPVTTSPTAATTQNPVLSK 20 0 Q96JN0-3;Q96JN0-2;Q96JN0 Q96JN0-3;Q96JN0-2 LCOR Ligand-dependent corepressor 1 ASPVTT(0.001)S(0.754)PT(0.245)AATTQNPVLSK;ASPVTT(0.002)S(0.715)PT(0.283)AATTQNPVLSK 245.32 2.0579e-26 784270000.0 899400.0 1260180.0 915640.0 789660.0 870180.0 1158350.0 812150.0 1243330.0 1295650.0 1373950.0 True False 849508.4890905495 1199639.0612312562 974663.6194757984 864709.0489800642 938658.2153530736 1151120.3079818836 894250.0478201727 1239017.1784254026 1060392.6206785627 1361777.8719169244 0.6238230967101321 0.8809359338043646 0.7157287833615629 0.6349853869800699 0.6892887854255989 0.8453069562376528 0.6566783513388788 0.9098526301365758 0.7786825168379974 1.0 20.377059964877652 -8.148860256377235 0.6092209147624853 1.001428483220734 0.7191569974557537 0.4539568333130015 0.0911891170316238 0.9268202363622183 0.7717608123025325 0.0958583211790563 0.039214252553252706 7.098061266624778e-09 8.148860256377235 -0.2822714857649804 ASQEPS(ph)PKPGTEVIPAAPR ddPTM_KYSE-520_SHP099_60min_R1 6 ASQEPSPKPGTEVIPAAPR 19 1 I3L4I0;I3L1Y9;Q96CP2 I3L4I0 FLYWCH2 FLYWCH family member 2 1 ASQEPS(0.999)PKPGTEVIPAAPR;AS(0.006)QEPS(0.994)PKPGTEVIPAAPR;ASQEPS(1)PKPGTEVIPAAPR;ASQEPS(1)PKPGTEVIPAAPR;ASQEPS(1)PKPGTEVIPAAPR;ASQEPS(1)PKPGTEVIPAAPR 207.88 1.2510000000000001e-18 16673200000.0 12042820.0 13595640.0 9905740.0 8330840.0 9476220.0 13626310.0 9216150.0 12386500.0 14336250.0 13035310.0 True False 11374780.7678335 12942485.046928324 10544279.850144383 9122600.528841613 10221944.601683667 13541263.144866949 10147808.382956225 12343534.122530837 11733148.387452688 12919827.29471772 0.8804127569479265 1.001753719433995 0.8161316408970435 0.7060930708084151 0.7911827587558323 1.0480993929696958 0.7854445846273165 0.9553946690585794 0.9081505595860243 1.0 23.623083449203158 -6.219966474528428 24.994603367411404 0.9270068843358876 0.839483353424518 0.213396249961205 0.09480022953182253 985.2353641879071 593774.7491572797 0.0331048104652074 0.033104445941665346 6.026061026082978e-07 6.219966474528428 -0.08752353091136966 ASQGLLSSIENS(ph)ES(ph)DSSEAKEEGSR ddPTM_KYSE-520_SHP099_60min_R1 2 ASQGLLSSIENSESDSSEAKEEGSR 25 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 2 ASQGLLS(0.001)S(0.005)IENS(0.994)ES(0.954)DS(0.024)S(0.022)EAKEEGSR;ASQGLLS(0.003)S(0.011)IENS(0.986)ES(0.967)DS(0.016)S(0.017)EAKEEGSR 106.49 0.00071509 400220000.0 895080.0 1015620.0 868290.0 943000.0 1108890.0 891180.0 998280.0 995380.0 1266790.0 984270.0 True False 845428.1281022575 966828.0907233009 924261.3627131217 1032622.4364767113 1196153.3342789658 885617.8150535633 1099195.884673918 991927.2591034389 1036772.8691771672 975550.1335504722 0.8666167929528733 0.9910593597118091 0.9474257969186194 1.0585026857805113 1.2261321003828045 0.9078137397515348 1.1267446406607955 1.0167875796330046 1.0627571393013677 1.0 19.89585648931741 -5.252972984279192 5.749918930987308 1.0616504361171148 0.9396546770263383 0.31113422271178115 0.08292365386504208 0.1986898299695518 26.411433091239598 0.022290815285850845 0.036774272434673495 5.585049360120822e-06 5.252972984279192 -0.12199575909077653 ASQGLLSSIENSES(ph)DSSEAKEEGSR ddPTM_KYSE-520_SHP099_60min_R1 3 ASQGLLSSIENSESDSSEAKEEGSR 25 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ASQGLLSSIENS(0.141)ES(0.843)DS(0.007)S(0.01)EAKEEGSR;ASQGLLSSIENS(0.002)ES(0.998)DS(0.001)SEAKEEGSR;ASQGLLSSIENS(0.004)ES(0.995)DS(0.001)SEAKEEGSR 270.23 3.9419999999999993e-38 2336150000.0 432755.0 406673.0 410494.0 532692.0 417062.0 433242.0 445968.0 414984.0 564017.0 486342.0 True False 408749.2174742952 387135.8186513825 436955.10005362215 583318.88752031 449882.4066418248 430537.97597504023 491050.79766824795 413544.51736199344 461605.73051152803 482033.3882483509 0.8479686831645392 0.803130712704748 0.9064830584484249 1.2101213354535834 0.9333013388899082 0.8931704451833958 1.0187070224588908 0.8579167490135124 0.957621902891303 1.0 18.878773553240713 -4.999512673302385 23.790595275267137 0.9781621493693713 0.8328638534719442 0.3253498611842863 0.09008606891880888 11.42466493449346 557467.2020682005 0.02447200099556148 0.05011361982136801 1.001122740991655e-05 4.999512673302385 -0.14529829589742704 ASQLS(ph)VQQNKLS(ph)VQSNTSPQLR ddPTM_KYSE-520_SHP099_60min_R1 1 ASQLSVQQNKLSVQSNTSPQLR 22 1 A0A1B0GTU1;A0A494C0C4 A0A1B0GTU1 2 AS(0.363)QLS(0.5)VQQNKLS(0.452)VQS(0.374)NT(0.309)S(0.003)PQLR 64.845 0.008457600000000001 1251500000.0 267790.0 379890.0 367520.0 425570.0 286110.0 395670.0 451120.0 327070.0 472630.0 251330.0 True False 252935.15487387002 361639.5141734852 391210.92725279083 466016.0448477139 308625.22925678367 393200.4767636662 496723.612106922 325935.4705087116 386812.3060327325 249103.4117317811 1.0153821383474857 1.4517645971179067 1.5704759904052306 1.8707734334425363 1.2389442083960374 1.5784628320829255 1.9940458007125283 1.3084343897291075 1.5528181783765678 1.0 17.92638525536849 -4.271836295354123 3.0256676927374095 1.5466062346593628 0.9365154270045477 0.2191863869100802 0.2751997129844656 0.5027277195896792 6.957914492597698 0.06759947411733026 0.7301590872486934 5.347658981412542e-05 4.271836295354123 -0.610090807654815 ASQLSVQQNKLSVQS(ph)NT(ph)SPQLR ddPTM_KYSE-520_SHP099_60min_R1 2 ASQLSVQQNKLSVQSNTSPQLR 22 1 A0A1B0GTU1;A0A494C0C4 A0A1B0GTU1 2 AS(0.318)QLS(0.378)VQQNKLS(0.442)VQS(0.445)NT(0.395)S(0.023)PQLR;AS(0.33)QLS(0.409)VQQNKLS(0.445)VQS(0.424)NT(0.373)S(0.019)PQLR 70.569 0.008973 1587310000.0 607077.0 764490.0 895030.0 1150800.0 741450.0 906060.0 1057450.0 1006130.0 920660.0 609797.0 True False 573401.2286320035 727762.7528771149 952725.0658986323 1260171.6859993641 799797.8967265803 900404.943454108 1164347.3657174683 1002639.9698625073 753491.3519499297 604394.6729948869 0.9487198584836873 1.2041184103607607 1.5763293564082956 2.0850145481180062 1.323304013854779 1.4897632022341225 1.9264686102342907 1.6589159611454576 1.2466876126095576 1.0 19.2051314193907 -4.609082354490091 3.1836174262441688 1.5861662282909619 0.985304716839387 0.27912746751071826 0.3017283297605121 0.28074996810925423 5.433750723140241 0.07775961615094507 0.27763939847710944 2.4599010932485057e-05 4.609082354490091 -0.6008615114515748 ASQPDLVDT(ph)PTSSKPQPK ddPTM_KYSE-520_SHP099_60min_R1 3 ASQPDLVDTPTSSKPQPK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ASQPDLVDT(0.773)PT(0.149)S(0.029)S(0.049)KPQPK;ASQPDLVDT(0.994)PT(0.005)S(0.001)SKPQPK;ASQPDLVDT(0.922)PT(0.072)S(0.006)S(0.001)KPQPK 243.48 2.9489999999999996e-23 2400590000.0 1971580.0 2406160.0 1739120.0 1439720.0 1297750.0 1797480.0 1478960.0 1986160.0 2234920.0 2102180.0 True False 1862212.5271527092 2290564.461880208 1851226.4578903837 1576550.5559323977 1399875.5418125575 1786261.2605786503 1628467.7100586416 1979270.4745332291 1829114.8657484148 2083556.3206712944 0.893766349715341 1.0993532736097187 0.8884936008324186 0.7566632782090834 0.6718683473655928 0.8573136434359213 0.781580845164757 0.949948151099431 0.8778811724941028 1.0 20.990616667423183 -4.977679706455563 12.007277422757548 0.8304439147317627 0.9960081730539933 0.2657738104863351 0.10005694539778405 0.8862620490587754 470.1329098892285 0.0263905461515312 0.05466354616143177 1.0527379851662717e-05 4.977679706455563 0.16556425832223054 ASQS(ph)RPNS(ph)SALETLGGEK ddPTM_KYSE-520_SHP099_60min_R1 1 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 2 AS(0.001)QS(0.999)RPNS(0.956)S(0.044)ALETLGGEK 183.71 7.7843e-12 1173900000.0 2190300.0 2493000.0 2181600.0 2297300.0 2463700.0 1999600.0 2149900.0 2592800.0 2733800.0 2348900.0 True False 2068799.6927451997 2373232.537930708 2322229.4266834185 2515634.7012915686 2657579.173464531 1987119.7546860415 2367232.873002022 2583806.181964068 2237410.8334897966 2328090.5734165465 0.8886250888895489 1.0193901238335046 0.9974824232355675 1.08055705822467 1.1415273975206428 0.8535405698455626 1.0168130484408229 1.1098392010463112 0.9610497370840368 1.0 21.150715756125795 -4.256876642982953 4.924940230864665 1.0235713317835875 0.8812361733625569 0.20821171220954005 0.07662175561557785 0.29165696089343596 21.353227613358175 0.019343504065744477 0.1422055478717761 5.535073051204743e-05 4.256876642982953 -0.14233515842103062 ASQS(ph)RPNSS(ph)ALETLGGEK ddPTM_KYSE-520_SHP099_60min_R1 3 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 2 AS(0.149)QS(0.844)RPNS(0.044)S(0.963)ALETLGGEK;AS(0.009)QS(0.991)RPNS(0.341)S(0.565)ALET(0.095)LGGEK;AS(0.439)QS(0.559)RPNS(0.269)S(0.733)ALETLGGEK 159.74 1.0099999999999999e-07 1571340000.0 7007900.0 7330180.0 6880670.0 7623890.0 8006670.0 6636250.0 6477180.0 8105750.0 8933070.0 7571760.0 True False 6619157.81709769 6978027.149975503 7324208.99766126 8348462.213393887 8636749.377279412 6594830.70215806 7131956.5655850135 8077633.045146281 7311049.672369129 7504680.097140149 0.8820039936972249 0.9298233981531949 0.9759521928792592 1.1124341218189011 1.1508484393053164 0.8787624011676646 0.9503345210281287 1.0763460854546578 0.974198710369439 1.0 22.839359144553747 -4.775070360119237 2.8452005031798415 1.0210982879622834 0.8955932595627083 0.2667005698833037 0.07563002138130373 0.37117147554517815 5.999702741178956 0.021956013357865387 0.06510964171439153 1.678532056842968e-05 4.775070360119237 -0.1255050283995751 ASQS(ph)RPNSSALETLGGEK ddPTM_KYSE-520_SHP099_60min_R1 2 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 AS(0.005)QS(0.865)RPNS(0.121)S(0.006)ALET(0.004)LGGEK;AS(0.16)QS(0.756)RPNS(0.034)S(0.051)ALETLGGEK 200.68 1.0911e-12 816590000.0 700150.0 747850.0 698010.0 619670.0 641930.0 675770.0 592720.0 692150.0 892860.0 746600.0 True False 661311.2837855775 711922.1634542642 743004.841455487 678563.2504894205 692446.2389179232 671552.2687658459 652637.9219897476 689749.093199024 730739.131168959 739985.7048460103 0.8936811609397174 0.9620755628007893 1.0040799931535231 0.916995079831479 0.935756237428965 0.9075205971790965 0.8819601753327928 0.9321113755063141 0.9875043887787325 1.0 19.497137875250058 -7.7964311675381275 4.566416698567144 0.9977881506060051 0.9301744828572178 0.38155041496745945 0.03297478903053621 0.23207242276970472 10.441725636767746 0.032909716581604125 0.009102034290797697 1.5979707755331957e-08 7.7964311675381275 -0.0676136677487873 ASQSRPNS(ph)SALETLGGEK ddPTM_KYSE-520_SHP099_60min_R1 7 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 AS(0.001)QS(0.001)RPNS(0.902)S(0.097)ALETLGGEK;ASQSRPNS(0.5)S(0.5)ALETLGGEK;ASQSRPNS(0.891)S(0.109)ALETLGGEK;ASQSRPNS(0.948)S(0.052)ALETLGGEK;ASQS(0.008)RPNS(0.95)S(0.042)ALETLGGEK;ASQSRPNS(0.902)S(0.098)ALETLGGEK;ASQSRPNS(0.99)S(0.01)ALETLGGEK 294.78 3.1341e-38 12018820000.0 5403490.0 5836800.0 5044280.0 4967890.0 4603320.0 5408690.0 5055480.0 6611720.0 6871170.0 6185070.0 True False 5103747.638109738 5556391.366784586 5369442.359933364 5440036.771949402 4965575.094692029 5374932.359458319 5566537.255130128 6588785.486507049 5623538.736099966 6130275.091711649 0.8325478974035255 0.9063853226255745 0.8758893001707284 0.8874050006833342 0.8100085266003257 0.8767848553363322 0.9080403688011139 1.0747944240569762 0.9173387249298471 1.0 22.5475203846013 -7.051520061332786 5.62814635705384 0.9973929339359587 0.8675134882838578 0.647757433699727 0.04364980879843518 0.12575060479330916 9.07758467486741 0.01964991621293077 0.011435204268953298 8.881369497274506e-08 7.051520061332786 -0.12987944565210097 ASQSRPNSS(ph)ALETLGGEK ddPTM_KYSE-520_SHP099_60min_R1 1 ASQSRPNSSALETLGGEK 18 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 AS(0.006)QS(0.013)RPNS(0.373)S(0.608)ALETLGGEK 171.72 9.8814e-09 1988900000.0 217000.0 256510.0 249130.0 206040.0 240670.0 225220.0 207930.0 274040.0 352290.0 310770.0 True False 204962.57742122476 244186.87457064018 265189.3184220935 225621.9796518154 259609.3597750167 223814.31843888309 228949.59360124223 273089.41920141666 288323.0165082014 308016.81957540114 0.6654265754180702 0.792771235373607 0.8609572645664447 0.7324988939332391 0.8428415049960136 0.7266301845055392 0.7433022453671443 0.8866055417943357 0.9360625725103341 1.0 18.232649607355324 -7.582698771046417 2.115340640048644 0.9827914334111841 0.771183178229917 0.6840443598485624 0.05603559590179616 0.19188258230059152 1.5683881222332785 0.04919524997346689 0.015473409863558003 2.6139737918395513e-08 7.582698771046417 -0.21160825518126714 ASS(ph)ASVPAVGASAEGTR ddPTM_KYSE-520_SHP099_60min_R1 1 ASSASVPAVGASAEGTR 17 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 AS(0.042)S(0.958)ASVPAVGASAEGTR 112.03 0.00025901 531590000.0 602390.0 664780.0 516210.0 436970.0 524260.0 769660.0 545030.0 668390.0 784010.0 870670.0 True False 568974.225865306 632842.9709448768 549485.7225652027 478499.4974201785 565516.2793686396 764856.2664491188 600126.9513802002 666071.5110933981 641653.5472837583 862956.5411710102 0.6593312626070629 0.7333428055208028 0.6367478503837105 0.5544885224125734 0.6553241703240911 0.8863207241134394 0.6954312560929697 0.771848267340967 0.7435525622333781 1.0 19.71892838098382 -6.177798295202982 8.448210228678823 0.7972740869017212 0.6462445787661595 0.47311998787718434 0.08902303880112823 0.3512728230094571 32.71616951168638 0.02890452913312288 0.028914370508499168 6.640514124635669e-07 6.177798295202982 -0.1510295081355617 ASS(ph)ATFRPVIR ddPTM_KYSE-520_SHP099_60min_R1 3 ASSATFRPVIR 11 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 AS(0.231)S(0.768)AT(0.001)FRPVIR;AS(0.001)S(0.979)AT(0.021)FRPVIR;AS(0.208)S(0.792)ATFRPVIR 147.52 4.3712e-05 1965930000.0 3402620.0 1929730.0 1578830.0 1193910.0 1540570.0 1611220.0 1595490.0 1506590.0 1968390.0 1611420.0 True False 3213869.8856451963 1837022.8742162168 1680603.9080173164 1307378.8474378681 1661804.0943557478 1601163.7783282883 1756777.699681844 1501363.9909307498 1610979.995073886 1597144.072465788 2.0122604723338378 1.1501923376142806 1.052255671226126 0.818572895192505 1.040484777174881 1.0025168085533414 1.0999494222018442 0.9400304060314572 1.0086629145401622 1.0 20.6070630281327 -4.21870211486719 2.489874122356391 0.9927844150051328 2.306428730811245 0.9475065503225572 0.07141746379585788 0.12552773637629272 0.8862769073775277 0.018888698779048488 0.3658166646061802 6.0436302338556685e-05 4.21870211486719 1.3136443158061124 up ASS(ph)ESSYLSILPK ddPTM_KYSE-520_SHP099_60min_R1 2 ASSESSYLSILPK 13 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 AS(0.184)S(0.816)ESSYLSILPK;AS(0.033)S(0.967)ESSYLSILPK 246.25 4.731e-16 900150000.0 1200580.0 1150230.0 891400.0 899630.0 935430.0 1304420.0 1193430.0 1596710.0 1946040.0 1549150.0 True False 1133981.4341031043 1094971.224269572 948861.0702904282 985130.5647163768 1009043.0191313591 1296278.6309299686 1314073.551154379 1591171.3856849142 1592688.1916762341 1535425.7362204627 0.73854528249244 0.7131385116449237 0.6179791362792338 0.6416009198473718 0.6571747466049225 0.8442470386883261 0.8558366061969531 1.0363063143657294 1.0372941876021475 1.0 20.550207304641916 -6.777348852654564 1.3529386884328674 1.031706004076935 0.6701623476034869 0.910973545437555 0.04671680683445603 0.12216444410496724 0.4505410908889802 0.030945354935047124 0.017763680731851215 1.6697488281565265e-07 6.777348852654564 -0.3615436564734481 ASS(ph)FADMMGILK ddPTM_KYSE-520_SHP099_60min_R1 6 ASSFADMMGILK 12 0 E9PPF9;E9PLD2;Q9H019-3;Q9H019 E9PPF9 MTFR1L Mitochondrial fission regulator 1-like 1 AS(0.156)S(0.844)FADMMGILK;ASS(1)FADMMGILK;AS(0.015)S(0.985)FADMMGILK;AS(0.04)S(0.96)FADMMGILK;AS(0.001)S(0.999)FADMMGILK;AS(0.065)S(0.935)FADMMGILK 257.76 6.833e-25 7787654000.0 8630160.0 7577660.0 7113540.0 6887990.0 7247800.0 7400470.0 6829250.0 8255180.0 9393960.0 7753760.0 True False 8151427.821002567 7213617.839300443 7572090.170466429 7542622.498650286 7818160.625659062 7354280.921665041 7519617.237057092 8226544.707353501 7688253.666460536 7685067.718733996 1.0606839288002263 0.9386537768191303 0.9852990822719544 0.9814646760058511 1.0173183778980404 0.9569572046499224 0.9784711745254263 1.0704583236527037 1.0004145633900887 1.0 22.873626541933945 -7.211039944322047 24.998952927187712 1.026577513271731 0.986009135269213 0.16295596571798476 0.03610748983661138 519.4647088136039 257663.3561657835 0.01603689143862214 0.009258876993314295 6.151202942956064e-08 7.211039944322047 -0.040568378002518 ASS(ph)FLDTSK ddPTM_KYSE-520_SHP099_60min_R1 2 ASSFLDTSK 9 0 F5H269;Q9Y485 F5H269 DMXL1 DmX-like protein 1 1 AS(0.001)S(0.999)FLDTSK;AS(0.011)S(0.989)FLDTSK 123.01 0.00071016 613770000.0 1590110.0 1284300.0 1130610.0 1054840.0 1283480.0 1419870.0 1262060.0 1533440.0 1639860.0 1450660.0 True False 1501903.4284943033 1222600.3002263997 1203490.9296399606 1155091.6764507887 1384482.5739977502 1411008.0646559666 1389641.3413186348 1528120.8545475858 1342102.7615065416 1437808.2809964032 1.044578368580185 0.8503221996879416 0.8370315747562252 0.803369748051742 0.9629118097986623 0.9813603686286575 0.9664997480440239 1.0628126675474396 0.9334365222715664 1.0 20.455439887315944 -5.937235813889287 7.975367320223109 0.9892783647151651 0.8781897971236297 0.3549156411167921 0.06707026870406832 0.2723373719428309 30.376107448305273 0.021063001803854935 0.023896038789707 1.1554846649761032e-06 5.937235813889287 -0.1110885675915354 ASS(ph)FSGISILTR ddPTM_KYSE-520_SHP099_60min_R1 5 ASSFSGISILTR 12 0 B5MCU0;H7C0E9;A0A0U1RRA6;B5MCG9;Q9Y2K5;H0YIX9;Q9Y2K5-3;Q9Y2K5-2 B5MCU0 R3HDM2 R3H domain-containing protein 2 1 AS(0.228)S(0.767)FS(0.002)GIS(0.003)ILTR;AS(0.387)S(0.613)FSGISILTR;AS(0.009)S(0.99)FS(0.001)GISILTR;AS(0.001)S(0.999)FSGISILTR;AS(0.147)S(0.852)FSGISILTR 201.38 3.0599e-08 1397321000.0 2288120.0 2263660.0 1939500.0 1662570.0 1746840.0 2036590.0 1767070.0 2037560.0 2397410.0 2034600.0 True False 2161193.4223458637 2154910.375777067 2064523.273309719 1820580.1529301042 1884306.3698399907 2023878.8863752955 1945702.680541274 2030492.1799300797 1962100.7777879813 2016575.026894847 1.0717148598600381 1.0685991579967302 1.023777070416618 0.9028080426709744 0.9344092556484122 1.0036219130868118 0.9648550907313856 1.0069013812278844 0.9729867481346598 1.0 20.943475651693575 -5.0058126221144645 5.368199247592722 0.9688044345515973 1.0660090161553502 0.6417206708664894 0.0304827336275044 0.10699172856198712 10.22867458193981 0.008767248680497641 0.017230576150654552 9.86705111205123e-06 5.0058126221144645 0.0972045816037529 ASS(ph)FSGISVLTR ddPTM_KYSE-520_SHP099_60min_R1 6 ASSFSGISVLTR 12 0 Q15032-2;Q15032-4;Q15032;Q15032-3;H7C1X4;H7BZ47;H7C207 Q15032-2 R3HDM1 R3H domain-containing protein 1 1 AS(0.189)S(0.811)FSGISVLTR;AS(0.005)S(0.961)FS(0.034)GISVLTR;AS(0.002)S(0.998)FSGISVLTR;AS(0.006)S(0.99)FS(0.004)GISVLTR;AS(0.007)S(0.993)FSGISVLTR;AS(0.001)S(0.998)FS(0.001)GISVLTR 228.78 2.0967e-11 1704904000.0 2338820.0 2111029.0 1971800.0 1804043.0 1785147.0 2102075.0 1734780.0 2179690.0 2307710.0 1992685.0 True False 2209080.992277921 2009611.9981208718 2098905.3829915463 1975498.7043146966 1925627.9128029747 2088955.1701998685 1910148.4922212411 2172129.1641334677 1888688.036634991 1975031.3611854685 1.11850426058651 1.0175089052331032 1.062720027762863 1.0002366256751223 0.9749859929551495 1.057682025335547 0.9671484361011448 1.0997947712737561 0.9562825551799583 1.0 20.913444131103805 -1.0238189484220939 1.0476525158399737 1.0139515896329288 134.89733601785173 0.3362307102741041 0.043639276166400516 2809.6037205269195 3.1025255001199965 0.012289356266559756 903991.9926331897 0.09466317172565088 1.0238189484220939 133.8833844282188 ASS(ph)HS(ph)SQTQGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 2 ASSHSSQTQGGGSVTK 16 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.359)S(0.579)HS(0.531)S(0.531)QTQGGGSVTK;AS(0.436)S(0.563)HS(0.562)S(0.436)QT(0.003)QGGGSVTK 157.14 9.334e-07 1084640000.0 1289070.0 1799210.0 1693660.0 3817100.0 1278970.0 1267330.0 1313950.0 1328850.0 1852790.0 1161470.0 True False 1217562.717402665 1712773.2509307333 1802836.033551814 4179876.0363470362 1379617.6626561407 1259420.1233778067 1446776.8889162322 1324240.5295059225 1516370.0410350314 1151180.279409987 1.0576646761415172 1.4878410285212487 1.5660761965761083 3.6309482633678742 1.1984375404373975 1.0940251026740102 1.256776992095232 1.1503328828605663 1.3172307310651767 1.0 20.134682352268058 -5.940143553109906 24.999999999991402 1.1752035877026448 1.9444300514343753 0.2582255753709676 0.6361644989339903 109.67310790363346 45805.81609257726 0.20560704094815438 0.233136449742734 1.1477741697823305e-06 5.940143553109906 0.7692264637317305 ASS(ph)HSS(ph)QTQGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 7 ASSHSSQTQGGGSVTK 16 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 ASS(0.998)HS(0.025)S(0.976)QT(0.001)QGGGSVTK;ASS(1)HS(0.369)S(0.631)QTQGGGSVTK;AS(0.035)S(0.965)HS(0.018)S(0.848)QT(0.133)QGGGSVTK;ASS(1)HSS(0.824)QT(0.176)QGGGSVTK;ASS(1)HSS(0.654)QT(0.346)QGGGSVTK;AS(0.002)S(0.998)HS(0.002)S(0.996)QT(0.002)QGGGSVTK;AS(0.006)S(0.994)HSS(0.997)QT(0.003)QGGGSVTK 371.25 5.269299999999999e-72 15540700000.0 15170450.0 20226840.0 20299320.0 51893300.0 15900100.0 16048620.0 18758440.0 17575510.0 22236460.0 15987790.0 True False 14328914.896957664 19255112.24529419 21607846.647260353 56825223.62971038 17151347.410806283 15948454.609646678 20654726.179932084 17514544.65796487 18198879.399540048 15846150.61891242 0.9042520951338219 1.2151286901383587 1.3636022505977783 3.586058532214716 1.0823668046128572 1.0064560784000223 1.303453859341752 1.1052870239073216 1.1484732057146827 1.0 23.917629084545748 ASS(ph)HSS(ph)QTQGGGSVTKK ddPTM_KYSE-520_SHP099_60min_R1 3 ASSHSSQTQGGGSVTKK 17 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.086)S(0.913)HS(0.205)S(0.776)QT(0.02)QGGGSVTKK;AS(0.068)S(0.93)HS(0.032)S(0.872)QT(0.097)QGGGSVTKK;AS(0.429)S(0.57)HS(0.189)S(0.765)QT(0.046)QGGGSVTKK 145.77 5.6897e-06 1733450000.0 1454050.0 2263940.0 2027500.0 5700150.0 1502200.0 1389840.0 1402520.0 1461890.0 2554250.0 1399700.0 True False 1373390.9479231876 2155176.92415678 2158195.894114701 6241890.542187408 1620414.5936511834 1381165.493025029 1544300.4088761297 1456819.0447976897 2090462.5874026334 1387299.7469501204 0.9899741933511411 1.5535048780155714 1.5556810262953922 4.499309219878227 1.1680349522253928 0.995578277918253 1.1131699636442405 1.0501112308283789 1.5068571820894268 1.0 20.40384810660151 -5.943987660355653 24.999995084654685 1.1290622089456555 2.1607449579994764 0.24014423069762858 0.8808019069129231 131.80988379604773 58829.83546621864 0.28385644238880625 0.3218629529839306 1.1376596097790044e-06 5.943987660355653 1.031682749053821 ASS(ph)HSSQT(ph)QGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 2 ASSHSSQTQGGGSVTK 16 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.01)S(0.99)HSS(0.075)QT(0.925)QGGGSVTK;ASS(0.999)HS(0.001)S(0.277)QT(0.723)QGGGSVTK 339.8 2.8669999999999994e-58 4371600000.0 4337100.0 5205200.0 5041400.0 11294700.0 4325100.0 3953500.0 4780700.0 4692500.0 5893400.0 4325800.0 True False 4096512.417205494 4955134.378835514 5366376.710525198 12368144.892124627 4665460.763547281 3928824.740023632 5263979.811135754 4676222.81273773 4823307.120524095 4287476.7774214735 0.9554599662856186 1.1557227329906556 1.2516398313304882 2.8847141417201887 1.0881600077967373 0.9163489259495097 1.2277570432233473 1.0906701203289204 1.12497568404904 1.0 22.031697426454613 -5.934719050291586 24.999999999645752 1.0778068404191832 1.5701758736493732 0.18948371352345816 0.49357085344777973 107.14671592833155 41031.60208606775 0.1610926164020863 0.18266184473176397 1.162200210353825e-06 5.934719050291586 0.49236903323019 ASS(ph)HSSQTQGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 10 ASSHSSQTQGGGSVTK 16 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.003)S(0.498)HS(0.498)S(0.001)QTQGGGSVTK;ASS(0.641)HS(0.33)S(0.029)QTQGGGSVTK;AS(0.002)S(0.857)HS(0.137)S(0.004)QTQGGGSVTK;AS(0.027)S(0.483)HS(0.447)S(0.042)QTQGGGSVTK;AS(0.019)S(0.569)HS(0.171)S(0.24)QTQGGGSVTK;AS(0.052)S(0.903)HS(0.008)S(0.015)QT(0.021)QGGGSVTK;AS(0.075)S(0.487)HS(0.146)S(0.292)QTQGGGSVTK;ASS(0.587)HS(0.269)S(0.125)QT(0.02)QGGGSVTK;AS(0.256)S(0.721)HS(0.012)S(0.012)QTQGGGSVTK;AS(0.021)S(0.84)HS(0.069)S(0.069)QTQGGGSVTK 318.82 2.8901e-47 9772350000.0 3314642.0 7597420.0 16444270.0 5325315.6 3251144.0 8904070.0 3369149.0 2939496.0 3677974.0 8767510.0 True False 3130772.200684992 7232428.539240082 17504293.955962285 5831431.993509482 3506990.536321047 8848496.396332948 3709735.4606455616 2929299.574459522 3010146.635779433 8689836.682419572 0.36027975151925057 0.8322858994429693 2.0143409589475096 0.6710634741049927 0.4035738143866441 1.01825807776507 0.4269050842060974 0.3370948938989607 0.34639852804935534 1.0 23.050897632476914 -5.498612903651848 24.973411914661796 0.566071996138884 1.0948675064698696 0.18805718119289916 0.44645554081244826 1165.6153302193352 1199603.6059603982 0.12875904447716532 0.18982697261868609 3.1723938285579825e-06 5.498612903651848 0.5287955103309856 ASS(ph)HSSQTQGGGSVTKK ddPTM_KYSE-520_SHP099_60min_R1 1 ASSHSSQTQGGGSVTKK 17 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.04)S(0.59)HS(0.124)S(0.038)QT(0.209)QGGGSVTKK 80.994 0.002517 0.0 31363.0 56419.0 124920.0 42312.0 27231.0 69862.0 29575.0 29108.0 37652.0 72074.0 True False 29623.231869409537 53708.5465533545 132972.543079067 46333.319758433325 29373.924776804273 69425.96534400691 32564.729624184733 29007.031141858268 30815.345929679515 71435.48043272352 0.41468513531322987 0.7518469285572471 1.861435553783359 0.648603739735034 0.411195173586997 0.9718695097094066 0.45586212099257223 0.40605915948415156 0.43137311799422673 1.0 16.124353186722516 -5.491047878925297 24.918151966457035 0.5873936994805935 1.0288157338648145 0.16833636812191755 0.39632822225038716 1038.798834295708 813202.3411602507 0.11345670566099966 0.16809629428957498 3.228138215029625e-06 5.491047878925297 0.441422034384221 ASS(ph)KGGGGYTCQSGSGWDEFTK ddPTM_KYSE-520_SHP099_60min_R1 2 ASSKGGGGYTCQSGSGWDEFTK 22 1 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 AS(0.04)S(0.954)KGGGGYT(0.006)CQSGSGWDEFTK;AS(0.189)S(0.806)KGGGGYT(0.004)CQSGSGWDEFTK 209.18 1.7604e-19 2589600000.0 751150.0 745180.0 562380.0 615100.0 667990.0 878600.0 782290.0 863570.0 1434420.0 919840.0 True False 709482.2121195983 709380.4342620163 598631.9146398146 673558.9190634418 720557.0126568055 873116.3314998773 861371.5076146564 860574.4772287534 1173965.4867855865 911690.933224691 0.7782047470957383 0.7780931107353525 0.6566171635846232 0.7388018181567675 0.7903522854046202 0.9576889488322828 0.9448064867421105 0.9439322536474763 1.2876792386573581 1.0 19.79818530247313 -6.648768531213689 0.9533539943067577 1.098579730056221 0.7294835103874054 0.7204073607707957 0.09050472347803076 0.2992071194887958 0.5482914330672962 0.06417112666558179 0.040575625563733834 2.2450781790490694e-07 6.648768531213689 -0.36909621966881556 ASS(ph)LEDLVLK ddPTM_KYSE-520_SHP099_60min_R1 17 ASSLEDLVLK 10 0 Q15477 Q15477 SKIV2L Helicase SKI2W 1 AS(0.003)S(0.997)LEDLVLK;AS(0.01)S(0.99)LEDLVLK;ASS(1)LEDLVLK;ASS(1)LEDLVLK;ASS(1)LEDLVLK;ASS(1)LEDLVLK;ASS(1)LEDLVLK;ASS(1)LEDLVLK;ASS(1)LEDLVLK;AS(0.002)S(0.998)LEDLVLK;AS(0.001)S(0.999)LEDLVLK;ASS(1)LEDLVLK;AS(0.019)S(0.981)LEDLVLK;ASS(1)LEDLVLK;AS(0.021)S(0.979)LEDLVLK;ASS(1)LEDLVLK;ASS(1)LEDLVLK 310.69 1.9141e-37 341539333000.0 115016280.0 108202210.0 96726496.0 83641768.0 89175347.0 102646940.0 91742821.0 97597178.0 118271550.0 96436426.0 True False 108636097.66913016 103004013.41677159 102961640.70002545 91591056.48290548 96192939.47058195 102006282.37251091 101017080.67032892 97258636.16887054 96796417.90314949 95582074.29204422 1.1365739703158177 1.0776499064254472 1.0772065940464264 0.9582451224384975 1.0063910014828854 1.0672114319347996 1.0568621932359243 1.0175405471082757 1.012704721257617 1.0 26.51023674104862 -4.727573408443679 1.9406101534529596 1.0217400134438934 1.1266101752297928 0.5768968925034155 0.03173654730514738 0.3006154718845344 2.0749548791526653 0.009550307969104744 0.040774582770482196 1.8725205456387144e-05 4.727573408443679 0.10487016178589936 ASS(ph)LGEIDESSELR ddPTM_KYSE-520_SHP099_60min_R1 8 ASSLGEIDESSELR 14 0 Q16513-3;Q16513-2;Q16513;Q16513-4;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 AS(0.001)S(0.999)LGEIDESSELR;ASS(1)LGEIDESSELR;ASS(1)LGEIDESSELR;ASS(1)LGEIDESSELR;ASS(1)LGEIDESSELR;ASS(1)LGEIDESSELR;ASS(1)LGEIDESSELR;ASS(1)LGEIDESSELR 372.86 1.3666999999999997e-67 13887600000.0 10441230.0 10945400.0 9480840.0 9364720.0 9278110.0 11421700.0 10258630.0 12508400.0 15771900.0 12530200.0 True False 9862034.157824023 10419566.554619666 10091990.116280345 10254740.173194256 10008244.471775392 11350412.933635496 11295672.434980566 12465011.279882492 12908120.53724403 12419192.17634809 0.7940962679203818 0.8389890748661866 0.8126124447530638 0.8257171664292339 0.8058692006421914 0.9139413234342209 0.9095335891888985 1.0036893787360552 1.039368773262651 1.0 23.5660679987136 -6.853024769824489 1.1356935501761647 1.0253233777311304 0.8150212469896301 0.928879306111386 0.023416339184763574 0.11591217200243885 0.2916215242630755 0.01639071604903743 0.008588057242290604 1.4027336978848861e-07 6.853024769824489 -0.21030213074150028 ASS(ph)LNFLNK ddPTM_KYSE-520_SHP099_60min_R1 14 ASSLNFLNK 9 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 AS(0.002)S(0.998)LNFLNK;AS(0.158)S(0.842)LNFLNK;AS(0.001)S(0.999)LNFLNK;AS(0.001)S(0.999)LNFLNK;ASS(1)LNFLNK;AS(0.001)S(0.999)LNFLNK;AS(0.001)S(0.999)LNFLNK;AS(0.002)S(0.998)LNFLNK;AS(0.019)S(0.981)LNFLNK;AS(0.005)S(0.995)LNFLNK;ASS(1)LNFLNK;ASS(1)LNFLNK;AS(0.005)S(0.995)LNFLNK;AS(0.001)S(0.999)LNFLNK 231.7 1.7141e-10 107977996000.0 45840780.0 41697020.0 40225590.0 35484280.0 37546260.0 38424830.0 37895200.0 40175430.0 46521750.0 38547900.0 True False 43297900.55207064 39693832.570696935 42818595.8946196 38856695.30246218 40500937.05300335 38185006.38300306 41726016.637511574 40036070.81034583 38074572.91788133 38206395.59581243 1.1332631586114932 1.0389316226168044 1.1207180166273703 1.0170207028563831 1.0600564753991712 0.9994401666926227 1.0921212531779603 1.047889239118226 0.996549722215996 1.0 25.187310823992107 -1.0000000000000002 0.23688482394539723 1.0139238473971968 1.577144888156495 0.40245515735233783 0.03701852606212754 56.56432950181087 0.750815814420321 0.05025651107455629 12.475458373865566 0.09999999999999995 1.0000000000000002 0.5632210407592981 ASS(ph)LNFLNKS(ph)VEEPTQPGGTGLSDSR ddPTM_KYSE-520_SHP099_60min_R1 1 ASSLNFLNKSVEEPTQPGGTGLSDSR 26 1 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 2 AS(0.127)S(0.873)LNFLNKS(1)VEEPTQPGGTGLSDSR 149.37 6.385399999999999e-07 203370000.0 324720.0 339160.0 351540.0 233570.0 239180.0 240850.0 235720.0 231610.0 376110.0 238170.0 True False 306707.1342867284 322866.244510461 374200.8308838868 255768.4225746189 258002.10525195734 239346.76581122883 259548.8780055058 230806.59896818033 307817.9049615363 236059.99909345614 1.2992761817528562 1.3677295846410567 1.5851937317670695 1.0834890432807305 1.0929513947418696 1.0139234378140936 1.0995038507254693 0.9777454878189846 1.3039816408694944 1.0 17.848794068740784 -5.282287451950581 24.669550917337602 1.0791211636767613 1.4124327920203572 0.6698283906887892 0.1079931100060048 369.75322405664775 437528.6156490575 0.029450703174720358 0.043735026465228574 5.220505384663157e-06 5.282287451950581 0.33331162834359596 ASS(ph)LNVLNVGGK ddPTM_KYSE-520_SHP099_60min_R1 10 ASSLNVLNVGGK 12 0 H0YG16;Q07866-4;Q07866-6;Q07866-7;Q07866-9;G3V5R9;H0YJK1 H0YG16 KLC1 Kinesin light chain 1 1 AS(0.001)S(0.999)LNVLNVGGK;ASS(1)LNVLNVGGK;ASS(1)LNVLNVGGK;ASS(1)LNVLNVGGK;AS(0.001)S(0.999)LNVLNVGGK;ASS(1)LNVLNVGGK;AS(0.001)S(0.999)LNVLNVGGK;ASS(1)LNVLNVGGK;ASS(1)LNVLNVGGK;ASS(1)LNVLNVGGK 274.68 5.129299999999999e-22 55055800000.0 60507170.0 60151750.0 48564510.0 39755350.0 43193720.0 56883290.0 46523990.0 56375930.0 62016230.0 55982640.0 True False 57150716.66204704 57261969.64038252 51695056.02056334 43533686.51111818 46592820.02535146 56528260.287324935 51227088.93958661 56180375.05707104 50755645.93393634 55486677.363434896 1.029989889063149 1.0319949285360799 0.9316660949431765 0.7845790842002444 0.8397118414600837 1.0187717660055173 0.9232322311183241 1.0125020586309836 0.9147357229824641 1.0 25.72563807875554 -9.09076178522768 14.568686213188826 0.9999999932554997 0.9412943781092493 0.04382345376085095 0.0794794093847418 0.0 0.0 0.08395916175226799 0.020363087773112902 8.114059999446411e-10 9.09076178522768 -0.05870561514625039 ASS(ph)LPGSLQR ddPTM_KYSE-520_SHP099_60min_R1 1 ASSLPGSLQR 10 0 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 AS(0.004)S(0.995)LPGSLQR 93.928 0.0043484 0.0 908400.0 818940.0 766060.0 712210.0 730180.0 772380.0 758190.0 782820.0 890540.0 728120.0 True False 858009.2411494948 779596.893145999 815441.4533393374 779898.2242662553 787641.0118441088 767559.2899201857 834835.2444213231 780104.5801315615 728840.3846865188 721669.4232687879 1.188922813527499 1.0802687047690476 1.1299376515715613 1.080686252070541 1.0914152469928735 1.0635884868774688 1.1568111624294026 1.0809721944406245 1.0099366291358862 1.0 19.460978604310604 -6.98724854128201 0.015440399411297108 5.179863533807725e-07 2.1582479433917645 0.5175329879755148 0.0388519916900786 473.1482989568101 5.545179493452868 380.80012241711904 392.91462748109166 1.0297966120954592e-07 6.98724854128201 2.158247425405411 ASS(ph)PCHSPR ddPTM_KYSE-520_SHP099_60min_R1 1 ASSPCHSPR 9 0 Q86Y91;A0A494BYR6;Q86Y91-6 Q86Y91 KIF18B Kinesin-like protein KIF18B 1 AS(0.068)S(0.931)PCHS(0.001)PR 62.166000000000004 0.033105 8877300.0 17023.0 18857.0 15936.0 17060.0 17087.0 15863.0 16794.0 17623.0 23969.0 18997.0 True False 16078.70025549082 17951.081415065943 16963.26005850153 18681.37727072397 18431.64968826906 15763.993132918917 18491.701413645267 17561.869926239116 19616.83380931925 18828.701359442344 0.8539463210205713 0.953389247212406 0.9009256525275272 0.9921755576284345 0.9789124239854083 0.8372320975293117 0.9821017955851705 0.9327180664763197 1.041858035497582 1.0 14.200645878338484 -1.000000047012664 0.1109829856535704 1.0339480012221518 0.6148965921638871 0.27088304742854474 0.05344312925586889 167.4424663558554 1.2981614428644694 0.48260829717445264 10.755436848137082 0.09999998917493466 1.000000047012664 -0.41905140905826466 ASS(ph)PCPEFEQFQIVPAVETPYLAR ddPTM_KYSE-520_SHP099_60min_R1 4 ASSPCPEFEQFQIVPAVETPYLAR 24 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 AS(0.149)S(0.851)PCPEFEQFQIVPAVETPYLAR;AS(0.161)S(0.839)PCPEFEQFQIVPAVETPYLAR;AS(0.16)S(0.84)PCPEFEQFQIVPAVETPYLAR;AS(0.133)S(0.867)PCPEFEQFQIVPAVETPYLAR 153.81 2.2614e-07 674815000.0 721016.0 851955.0 655215.0 522570.0 634191.0 786898.0 546820.0 696139.0 859578.0 779160.0 True False 681019.8051702381 811025.802989474 697451.2072810661 572234.895683601 684098.22364681 781986.6776970073 602097.9020489169 693724.2562890635 703500.3033980151 772257.2485773076 0.8818561514635805 1.0502016063735082 0.9031332610551043 0.7409899961933694 0.8858424118479837 1.0125986892808372 0.779659761249419 0.8983072124827295 0.910966267644674 1.0 19.55872198180796 -4.115844057369268 0.002881180140825091 1.7905108852326106 1.7861984218120073e-07 0.016035496058986243 0.09159494955524426 1076141.2700436914 463.81589933644796 140984.11735758898 147304.61612072805 7.658715599468213e-05 4.115844057369268 -1.7905107066127683 ASS(ph)PEKAEEDR ddPTM_KYSE-520_SHP099_60min_R1 4 ASSPEKAEEDR 11 1 Q8N3D4;H0YDZ9 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 AS(0.43)S(0.57)PEKAEEDR;AS(0.178)S(0.822)PEKAEEDR;AS(0.025)S(0.975)PEKAEEDR;AS(0.022)S(0.978)PEKAEEDR 204.94 2.0495999999999998e-07 2671910000.0 3647440.0 3606390.0 3258680.0 3258020.0 3410260.0 3333530.0 3150800.0 3323580.0 4233190.0 2988080.0 True False 3445109.2322086263 3433133.611098248 3468739.7268723473 3567661.2412405726 3678628.0602748543 3312724.202759833 3469313.612844677 3312051.276709405 3464549.4060358033 2961607.935891066 1.1632563481675329 1.1592127268072412 1.1712352890588467 1.2046365752890116 1.242105011839812 1.1185559582730946 1.171429064192069 1.1183287418200747 1.1698204087211213 1.0 21.497949235479762 -9.476276675884655 0.41864967141759013 0.9587875817662962 1.181762742757357 0.7073075674986662 0.03312529479729617 4.569064938113422 0.7684130401295752 0.3035583354453667 0.02162723287789109 3.3398220227307976e-10 9.476276675884655 0.22297516099106074 ASS(ph)PELPVSVENIK ddPTM_KYSE-520_SHP099_60min_R1 2 ASSPELPVSVENIK 14 0 Q969R5 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 1 AS(0.004)S(0.996)PELPVSVENIK;ASS(1)PELPVSVENIK 257.81 1.3792e-24 504790000.0 1183260.0 1145500.0 789560.0 842600.0 893570.0 1317410.0 1054470.0 1269180.0 1172190.0 1316780.0 True False 1117622.20902967 1090468.4605694457 840456.3009406667 922680.4506630733 963888.8752821775 1309187.5555215734 1161066.1182354728 1264777.5108088378 959349.8445052325 1305114.3536393368 0.8563404470368124 0.8355348000952202 0.6439713873324877 0.7069728779628858 0.7385474480411273 1.0031209540151622 0.8896278820302738 0.9690932501676816 0.7350695682949673 1.0 20.315744790066105 -6.244256917492208 24.745001910797278 0.9155910059264434 0.75169887219316 0.44519210618283767 0.0909218612521344 705.1476635532922 1015505.5235593253 0.030441485385672765 0.030368801500665697 5.698270774482392e-07 6.244256917492208 -0.16389213373328337 ASS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 7 ASSPFR 6 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AS(0.195)S(0.805)PFR;AS(0.022)S(0.978)PFR;AS(0.051)S(0.949)PFR;AS(0.034)S(0.966)PFR;AS(0.064)S(0.936)PFR;AS(0.18)S(0.82)PFR;AS(0.076)S(0.924)PFR 113.14 0.0087649 73641100000.0 73560100.0 63063900.0 60483400.0 66168700.0 66399200.0 66351200.0 68706500.0 67624900.0 71440300.0 68730600.0 True False 69479574.61457618 60034215.583156295 64382256.74086163 72457353.353655 71624439.28023148 65937077.549072 75652023.53082164 67390325.00567032 58468542.383408226 68121700.35559765 1.0199330646752853 0.8812788769184504 0.9451064257759864 1.0636456955041504 1.05141884166645 0.9679305890028899 1.110542208076361 0.9892636950324271 0.8582954048152116 1.0 26.021611110149497 -5.144409171341143 9.342502354794528 1.010060930928026 0.9414215496674221 0.11657925384041956 0.07057172707616927 0.6721792671768624 49.869284455463124 0.019350418961832535 0.03359390548690701 7.171183385409015e-06 5.144409171341143 -0.06863938126060387 ASS(ph)PFRR ddPTM_KYSE-520_SHP099_60min_R1 4 ASSPFRR 7 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 AS(0.161)S(0.839)PFRR;AS(0.019)S(0.981)PFRR;AS(0.182)S(0.818)PFRR;AS(0.16)S(0.84)PFRR 122.33 0.0037465000000000003 120910000000.0 54060700.0 49735500.0 51155700.0 44658300.0 48617400.0 48288700.0 45520900.0 45631590.0 56693700.0 47072000.0 True False 51061845.203666344 47346131.925492465 54453278.274014026 48902611.404992506 52443312.78483358 47987312.31151625 50122596.81317162 45473304.66478321 46399553.21187381 46654978.70146187 1.0944565108560729 1.0148141365244894 1.16714828276854 1.0481756238259778 1.1240668036826333 1.0285571582527082 1.0743247174947503 0.974672069957635 0.9945252254593773 1.0 25.47552770808918 -7.057192985950103 1.539712011126948 0.9861572659891582 1.0845782676708722 0.45772569048805367 0.043370711062267926 0.3572749954809082 1.6132203598231971 0.028845047723635175 0.013209706402187204 8.766111978694123e-08 7.057192985950103 0.09842100168171397 ASS(ph)PPDRIDIFGR ddPTM_KYSE-520_SHP099_60min_R1 8 ASSPPDRIDIFGR 13 1 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 AS(0.221)S(0.779)PPDRIDIFGR;AS(0.249)S(0.751)PPDRIDIFGR;AS(0.037)S(0.963)PPDRIDIFGR;AS(0.005)S(0.995)PPDRIDIFGR;AS(0.188)S(0.812)PPDRIDIFGR;AS(0.026)S(0.974)PPDRIDIFGR;AS(0.249)S(0.751)PPDRIDIFGR;AS(0.174)S(0.826)PPDRIDIFGR 196.22 1.0533999999999999e-08 43454650000.0 5937130.0 6266000.0 6341380.0 4505700.0 5177990.0 4922320.0 4062210.0 4245040.0 7139240.0 4701610.0 True False 5607785.56352477 5964971.954542258 6750155.501366735 4933920.373311894 5585468.354267003 4891597.975038104 4472857.830149094 4230314.947039784 5842933.98159474 4659957.393197233 1.2033984627651766 1.2800486037168775 1.44854446764274 1.058790876610718 1.1986093182785025 1.049708733856457 0.9598495120746654 0.9078012071988779 1.2538599580598007 1.0 22.151885333451784 -5.728318840170405 1.4001985451868497 1.0277972181299577 1.2981166114876554 0.4491348178896828 0.1187048116017566 0.36686418274329496 1.5003579417404025 0.044888974162565605 0.06467160823934744 1.8693092706944774e-06 5.728318840170405 0.2703193933576977 ASS(ph)RS(ph)PVFTPR ddPTM_KYSE-520_SHP099_60min_R1 3 ASSRSPVFTPR 11 1 P52735-3 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 2 AS(0.093)S(0.899)RS(0.988)PVFT(0.02)PR;AS(0.482)S(0.546)RS(0.973)PVFTPR;AS(0.223)S(0.777)RS(0.994)PVFT(0.006)PR 123.95 0.00065145 2020000000.0 2081330.0 1962890.0 1851400.0 1709610.0 1922280.0 1702350.0 1694620.0 1790140.0 2259920.0 1528940.0 True False 1965874.4758715075 1868589.8180420408 1970744.2063447363 1872090.8203870086 2073552.4997229362 1691725.0021953322 1865928.7274974121 1783930.422161819 1849575.4959471324 1515394.7810973204 1.2972688703916402 1.233071303498199 1.300482376557804 1.2353815941159565 1.3683249576862375 1.116359263802089 1.2313152656803166 1.1772050718493619 1.2205238654760489 1.0 20.53126225380608 -13.999980322608845 0.1408635895008264 0.13268012875697027 1.3298845553968284 0.6434173831380788 0.05848260503390809 84.04000915152012 0.7225056652786039 20.270171356305543 0.3423261909080309 1.0000453098940041e-14 13.999980322608845 1.197204426639858 ASS(ph)SLGLQDFDLLR ddPTM_KYSE-520_SHP099_60min_R1 2 ASSSLGLQDFDLLR 14 0 P41743 P41743 PRKCI Protein kinase C iota type 1 AS(0.019)S(0.902)S(0.079)LGLQDFDLLR;AS(0.032)S(0.788)S(0.18)LGLQDFDLLR 176.04 1.3411e-08 227168000.0 452050.0 434080.0 388480.0 333720.0 359880.0 406680.0 337260.0 402290.0 486510.0 376930.0 True False 426973.88536066643 413226.14523263683 413522.04238997714 365436.6484634236 388200.5085628999 404141.75926971383 371353.5321404074 400894.5498851916 398172.04791905853 373590.6934471025 1.1428921888310437 1.1060932525374763 1.1068852882132316 0.9781738540956629 1.0391064750060912 1.081776838552155 0.9940117317001318 1.0730849480916074 1.0657975557290924 1.0 18.511098990820184 -5.096596946934425 7.344515693416462 1.036889274164018 1.120147814321596 0.5719202463347506 0.0339624319157522 0.1963800164636835 13.00377737993167 0.009199158556400687 0.016075162367343892 8.005768969257577e-06 5.096596946934425 0.08325854015757783 ASSDLSIAS(ph)SEEDKLSQNACILESVSEK ddPTM_KYSE-520_SHP099_60min_R1 4 ASSDLSIASSEEDKLSQNACILESVSEK 28 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 ASSDLSIAS(0.988)S(0.012)EEDKLSQNACILESVSEK;ASSDLS(0.001)IAS(0.798)S(0.201)EEDKLSQNACILESVSEK;ASSDLS(0.001)IAS(0.96)S(0.039)EEDKLSQNACILESVSEK;ASSDLSIAS(0.84)S(0.16)EEDKLSQNACILESVSEK 366.98 2.2239999999999995e-93 1323880000.0 1089956.0 1174160.0 828637.0 781598.0 815535.0 1021197.0 835950.0 1119191.0 1299850.0 1028620.0 True False 1029493.9679065817 1117751.591149909 882052.266886077 855880.8389239932 879712.9647405928 1014823.3307292075 920455.9840857905 1115308.7876421425 1063830.0065519486 1019507.2270542504 1.0097956547901938 1.0963645587677926 0.865175099773119 0.8395044352917076 0.8628805577792938 0.9954057252359294 0.902844001160583 1.0939684958042915 1.0434747084881033 1.0 19.959440571651093 -7.259068453677766 24.975455658082595 1.0515412032695644 0.9375092480329134 0.28518343565237625 0.07742239585085076 281.9010104577291 2969601.6847031126 0.04227604421596826 0.022904262837950825 5.50720884707895e-08 7.259068453677766 -0.114031955236651 ASSESS(ph)YLSILPK ddPTM_KYSE-520_SHP099_60min_R1 2 ASSESSYLSILPK 13 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 AS(0.033)S(0.042)ES(0.279)S(0.362)Y(0.279)LS(0.005)ILPK;AS(0.033)S(0.033)ES(0.248)S(0.429)Y(0.248)LS(0.01)ILPK 77.67699999999999 0.014266999999999998 42321000.0 197639.0 204089.0 184212.0 170847.0 182608.0 227844.0 188102.0 242370.0 322510.0 262860.0 True False 186675.5706864211 194284.25809616531 196086.60026962106 187084.24751297655 196978.21070260648 226421.94108155972 207117.18585861017 241529.27503958324 263950.31381549285 260531.26490198576 0.7165188821259135 0.7457233901246241 0.752641339776977 0.7180875108534838 0.7560636178414575 0.869077809785101 0.7949801569363644 0.9270644547419242 1.0131233727928715 1.0 17.991096987103735 -7.144898598064539 0.8167149685997046 1.021305927547402 0.7337927644429426 0.8986159337992504 0.03467008070517802 0.1842828244327457 0.22669299756200093 0.031371196611552875 0.014700742795837753 7.163106396142696e-08 7.144898598064539 -0.2875131631044593 ASSESSYLSILPKT(ph)PEGISEEQR ddPTM_KYSE-520_SHP099_60min_R1 1 ASSESSYLSILPKTPEGISEEQR 23 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 ASSES(0.002)S(0.002)YLS(0.001)ILPKT(0.995)PEGISEEQR 77.52199999999999 0.030201 160370000.0 253080.0 319960.0 266700.0 246230.0 270560.0 204380.0 201920.0 267030.0 430450.0 249560.0 True False 239041.1478975275 304588.64133024873 283891.9087350876 269631.62516825076 291851.53272418096 203104.38860908823 222332.04414929473 266103.7352552702 352291.1307614613 247349.09255474195 0.9664120673684066 1.2314120023013178 1.1477378218893535 1.0900853622843891 1.1799175396594186 0.8211244541523365 0.8988593483523268 1.0758225652126765 1.4242669221982052 1.0 17.916189081153178 -3.2857171543195363 13.25792954784773 1.0819964991564566 1.0736764566535644 0.0 0.16588087910860108 0.0 0.0 0.03905228195753255 0.0 0.0005179440467838229 3.2857171543195363 -0.0083200425028922 ASSGDIGS(ph)LDYQEFVVDIESR ddPTM_KYSE-520_SHP099_60min_R1 2 ASSGDIGSLDYQEFVVDIESR 21 0 J3KN59 J3KN59 BNIP2 1 ASS(0.002)GDIGS(0.998)LDYQEFVVDIESR;ASSGDIGS(0.999)LDYQEFVVDIESR 180.63 6.404299999999999e-10 98255000.0 92049.0 103105.0 105055.0 89342.0 90447.0 91435.0 82682.0 97666.0 117827.0 98824.0 True False 86942.85847486775 98151.68103623971 111827.01339394317 97833.03681834826 97564.66432696611 90864.32024890881 91040.30345855758 97327.21944141565 96432.58697695604 97948.49624390867 0.8876385223757293 1.00207440440765 1.1416919879553291 0.9988212230918493 0.9960812883131279 0.9276744792757304 0.9294711705614296 0.9936571072929397 0.9845234043902241 1.0 16.579735723210163 -5.959739887496466 3.5501506942487784 0.9640754439521486 1.0162677907254587 0.08004063417848883 0.06163453249178606 0.5338108245095451 14.120749629143761 0.021442105977721386 0.023876527194569442 1.0971351078183239e-06 5.959739887496466 0.05219234677331008 ASSGDQGS(ph)PPCFLR ddPTM_KYSE-520_SHP099_60min_R1 2 ASSGDQGSPPCFLR 14 0 A6NN50;O75147-2;O75147-1;O75147-4;O75147 A6NN50 OBSL1 Obscurin-like protein 1 1 ASSGDQGS(1)PPCFLR;ASSGDQGS(1)PPCFLR 178.47 8.8807e-09 1114910000.0 905960.0 867150.0 756120.0 745800.0 787720.0 788780.0 761910.0 815680.0 950990.0 748130.0 True False 855704.5928135136 825490.8123813132 804860.7050347744 816680.6077670535 849709.0824862934 783856.9314369147 838931.2983250242 812850.5964611435 778314.18850701 741502.1502363317 1.1540149850418953 1.1132682651266925 1.0854462185689535 1.1013867019896852 1.145929357339657 1.0571202405644862 1.1313942893592956 1.0962214960564465 1.0496452212025893 1.0 19.500091350705112 -7.934060009736127 2.086342529077773 1.0004897687993368 1.110780645341221 0.6467144684163431 0.026820280055619174 0.1830888535309153 1.767870776565412 0.02492984185806329 0.006991105738626346 1.1639651844711423e-08 7.934060009736127 0.11029087654188419 ASSHS(ph)S(ph)QTQGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 2 ASSHSSQTQGGGSVTK 16 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 AS(0.126)S(0.269)HS(0.802)S(0.802)QTQGGGSVTK;AS(0.017)S(0.08)HS(0.914)S(0.982)QT(0.007)QGGGSVTK 137.73 1.7617e-05 1680800000.0 1819080.0 2350170.0 2210130.0 3924700.0 1668570.0 1757500.0 1936200.0 1803100.0 2431470.0 1674290.0 True False 1718172.0061539211 2237264.3055229094 2352598.5161330323 4297702.307995921 1799876.9661353715 1746530.790588477 2131929.991491007 1796845.466946703 1989976.3403707088 1659457.0931779111 1.035382001268601 1.3481905104509089 1.4176916810953721 2.589824301974382 1.0846179594125884 1.05247119540995 1.284715344708489 1.0827911576223335 1.1991731202641962 1.0 20.662279896987027 ASSHS(ph)SQTQGGGSVTKK ddPTM_KYSE-520_SHP099_60min_R1 1 ASSHSSQTQGGGSVTKK 17 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.004)S(0.196)HS(0.498)S(0.225)QT(0.077)QGGGSVTKK 115.02 6.0758000000000003e-05 0.0 35126.0 89275.0 236100.0 64304.0 37471.0 106070.0 37262.0 28343.0 53112.0 103350.0 True False 33177.49075805499 84986.09499549303 251319.38377335673 70415.43282629734 40419.7545191742 105407.97778533126 41028.80660207514 28244.684748305946 43468.19964456438 102434.39940508333 0.3238901282258951 0.8296636236369203 2.4534666599595933 0.6874197851039772 0.3945916093999997 1.0290290995751215 0.4005373862722046 0.27573437158166514 0.4243515840090655 1.0 16.644340755372436 -5.497370519980073 24.994541635131856 0.5618200175035103 1.2326342572136295 0.19972600400871232 0.5516918521378279 1131.9055857335225 1109111.2612117499 0.15933672451792805 0.23524882228793445 3.1814820700789976e-06 5.497370519980073 0.6708142397101192 ASSHSS(ph)QTQGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 1 ASSHSSQTQGGGSVTK 16 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 ASS(0.047)HS(0.254)S(0.633)QT(0.066)QGGGSVTK 333.42 1.7546e-58 593890000.0 349300.0 468670.0 572320.0 834440.0 341320.0 441990.0 391870.0 377880.0 462840.0 420660.0 True False 329923.63268771314 446154.389711988 609212.6629443774 913744.9267164652 368179.9421548545 439231.3764621342 431484.0438826466 376569.2224778553 378799.9232469156 416933.2796685274 0.7913103817234518 1.070085818207393 1.4611754269861044 2.1915854916712707 0.8830668121469385 1.0534812112176182 1.034899502926913 0.9031882098191764 0.9085384681886541 1.0 18.669457007284763 ASSHSSQT(ph)QGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 2 ASSHSSQTQGGGSVTK 16 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 AS(0.089)S(0.089)HS(0.089)S(0.29)QT(0.442)QGGGSVTK;AS(0.189)S(0.189)HS(0.189)S(0.189)QT(0.243)QGGGSVTK 80.382 0.010834 862280000.0 324140.0 813650.0 1322550.0 147505.0 224710.0 749490.0 212113.0 128859.0 179770.0 832930.0 True False 306159.3080429296 774561.0326864517 1407803.6891548173 161523.83085100452 242393.3985749952 744812.1549008004 233555.45206338807 128412.01820491663 147128.2996329141 825550.8882097347 0.3708545559279303 0.9382353574425216 1.7052900181692479 0.19565581378184976 0.2936141212332075 0.9022001738935538 0.2829086073299122 0.15554706564895976 0.1782183287961475 1.0 19.654997622228326 -5.303860026799022 24.999612657910824 0.40244588459492725 0.9981390756146334 0.2903701106227021 0.4103773344554543 571.3512366966914 336711.2417375069 0.116640895923577 0.17300792492226658 4.967523990529694e-06 5.303860026799022 0.5956931910197062 ASSLSESS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 8 ASSLSESSPPK 11 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 ASSLS(0.001)ES(0.039)S(0.96)PPK;ASSLSES(0.186)S(0.814)PPK;ASSLSES(0.031)S(0.969)PPK;ASSLS(0.002)ES(0.235)S(0.764)PPK;ASSLS(0.002)ES(0.03)S(0.968)PPK;ASSLS(0.01)ES(0.106)S(0.884)PPK;ASSLSES(0.002)S(0.998)PPK;ASSLSES(0.002)S(0.998)PPK 188.15 9.138200000000001e-07 128521100000.0 30613400.0 36883700.0 26623200.0 23141270.0 23194140.0 34022700.0 25758900.0 31848400.0 37287600.0 33362700.0 True False 28915213.67570011 35111751.68843757 28339374.070626106 25340609.343123503 25019386.861395735 33810351.7092202 28362860.99463776 31737925.333872456 30517111.78390308 33067132.433787864 0.8744397093881252 1.0618323726359933 0.8570254504944326 0.7663382784662202 0.7566240257298823 1.022476072786793 0.8577357305303167 0.9598027708457347 0.9228835262631004 1.0 24.978894605327838 -7.714768788695086 0.8596503548410729 0.9929080946768339 0.8824030982243296 0.1313169803125137 0.09197035557615893 1.3144182577132149 2.0592848656652243 0.09315440023500457 0.035058025947004835 1.9285513692538186e-08 7.714768788695086 -0.11050499645250433 ASSNKDFT(ph)PNRDK ddPTM_KYSE-520_SHP099_60min_R1 1 ASSNKDFTPNRDK 13 2 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 AS(0.001)S(0.001)NKDFT(0.997)PNRDK 65.943 0.022678 318600000.0 437270.0 496250.0 406740.0 379200.0 386020.0 417550.0 285760.0 322560.0 569830.0 364430.0 True False 413013.76142386626 472409.40511356416 432959.1112070095 415239.0539893632 416397.57784664474 414943.91556769225 314647.4095488433 321441.1146460701 466363.23624533374 361201.43372224935 1.143444413184303 1.3078835270538534 1.1986638777849903 1.14960522086041 1.1528126385202535 1.1487881188388884 0.8711134014788978 0.889922034177878 1.2911444770287095 1.0 18.462444093777936 -6.585515022541166 8.444632162417689 1.0039019874553927 1.190835637046694 0.3487491080413986 0.1150290190079205 0.30661064337687827 37.278188170571084 0.04426518818410304 0.03424829654155099 2.597077905159211e-07 6.585515022541166 0.1869336495913012 ASSPS(ph)PLTIGTPESQR ddPTM_KYSE-520_SHP099_60min_R1 4 ASSPSPLTIGTPESQR 16 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 ASS(0.01)PS(0.989)PLT(0.001)IGTPESQR;ASSPS(1)PLTIGTPESQR;ASSPS(1)PLTIGTPESQR;ASS(0.001)PS(0.999)PLTIGTPESQR 268.18 1.8417e-29 822720000.0 783380.0 809480.0 713930.0 601634.0 602600.0 693540.0 628226.0 811320.0 853670.0 697400.0 True False 739924.3497706867 770591.3657457493 759951.0701283875 658813.1144721425 650021.1916750127 689211.3596043993 691733.2149749135 808505.7202835113 698665.0472694547 691221.578568989 1.0704589855289608 1.1148253897702047 1.0994319241330497 0.9531142182164791 0.9403948195898746 0.9970917878912992 1.000740191599608 1.1696766208562694 1.010768571079444 1.0 19.39878873072369 -5.230325302187058 23.833887393867805 1.0134692515574406 1.0968974787312256 0.29931659260810217 0.059185419952242115 551.3702649781047 422356.55240306 0.01773803186511135 0.030717063826924657 5.884027554245678e-06 5.230325302187058 0.08342822717378495 ASSQVLSES(ph)PSQDSLDAFMSEMK ddPTM_KYSE-520_SHP099_60min_R1 1 ASSQVLSESPSQDSLDAFMSEMK 23 0 A0A087X0M4;Q9BWU0 A0A087X0M4 SLC4A1AP Kanadaptin 1 ASSQVLSES(0.795)PS(0.205)QDSLDAFMSEMK 224.56 2.1830999999999997e-21 30678000.0 46496.0 65681.0 38144.0 41518.0 42654.0 60859.0 44060.0 57413.0 66684.0 72781.0 True False 43916.77419252194 62525.58617080911 40602.823272557886 45463.85823715811 46010.62713193821 60479.15640650022 48514.01478416165 57213.847703294945 54575.86656684243 72136.21696276119 0.6088034005885429 0.8667710728868224 0.5628632188116858 0.6302501039197532 0.6378297763478535 0.8384021085791249 0.6725333934437676 0.7931362374163646 0.756566796329451 1.0 16.138436145450477 -8.813886809406817 0.39869757566625436 1.0428469302612247 0.6689240865289199 0.5186450895970471 0.09098260238885507 2.905255554813406 0.7120062050524093 0.30683752282072957 0.06598308375167039 1.5350170036426284e-09 8.813886809406817 -0.3739228437323048 ASSRS(ph)PVFTPR ddPTM_KYSE-520_SHP099_60min_R1 7 ASSRSPVFTPR 11 1 P52735-3 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 1 ASS(0.001)RS(0.999)PVFTPR;AS(0.003)S(0.009)RS(0.988)PVFTPR;AS(0.001)S(0.006)RS(0.992)PVFTPR;ASSRS(0.999)PVFTPR;AS(0.151)S(0.117)RS(0.733)PVFTPR;AS(0.003)S(0.002)RS(0.995)PVFTPR;AS(0.031)S(0.154)RS(0.798)PVFT(0.017)PR 162.37 1.2874e-05 17090150000.0 2272420.0 2332090.0 2161900.0 1819790.0 1981600.0 1894380.0 1720320.0 1819480.0 2422810.0 1760580.0 True False 2146364.3326430395 2220052.8958615456 2301259.533162301 1992742.2944601853 2137540.646238306 1882556.4717354192 1894226.7343052397 1813168.6485498226 1982888.7780698752 1744982.6309105118 1.2300204567211603 1.2722492800419152 1.3187864981564488 1.141984028471616 1.2249638525759778 1.0788396620046143 1.0855275581263832 1.0390754706846177 1.1363372580019473 1.0 20.734781245630746 -6.0214078729888385 1.0110267400167001 1.059506603730756 1.2704378630083866 0.7375233012301579 0.05114405113817617 0.26168412408460895 0.5749885602510156 0.025140274064060934 0.029145499502390478 9.519017538850457e-07 6.0214078729888385 0.21093125927763068 ASSRVS(ph)GSFPEDSSK ddPTM_KYSE-520_SHP099_60min_R1 1 ASSRVSGSFPEDSSK 15 1 O15400-2;O15400 O15400-2 STX7 Syntaxin-7 1 AS(0.001)S(0.021)RVS(0.974)GS(0.005)FPEDSSK 163.53 3.1468e-08 498620000.0 298960.0 354200.0 311110.0 311760.0 351350.0 370730.0 362430.0 349410.0 481730.0 302380.0 True False 282376.0928380152 337183.7003349606 331164.6483935998 341389.57666593825 378999.2460919602 368416.13655468926 399067.9613759352 348197.97826290684 394259.9754250638 299701.1484480801 0.9421922281586909 1.1250664272758832 1.104982914174486 1.1390999948906775 1.2645905698209814 1.2292783610020541 1.3315529935150356 1.1618172972174254 1.315510392491422 1.0 18.193165086673936 -3.8620431404780957 0.7030989193997996 1.227684033844951 0.625929090065929 0.4177523148492678 0.0925340602815861 4.2876386953246515 1.0912566935633037 0.03605607897334734 2.325481700609586 0.00013739054918514981 3.8620431404780957 -0.6017549437790221 ASSSGPRS(ph)PLDQR ddPTM_KYSE-520_SHP099_60min_R1 7 ASSSGPRSPLDQR 13 1 O14646-2;O14646 O14646-2 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 AS(0.014)S(0.019)S(0.019)GPRS(0.948)PLDQR;ASS(0.013)S(0.266)GPRS(0.721)PLDQR;AS(0.001)S(0.039)S(0.342)GPRS(0.618)PLDQR;AS(0.022)S(0.185)S(0.032)GPRS(0.761)PLDQR;AS(0.002)S(0.112)S(0.34)GPRS(0.546)PLDQR;AS(0.078)S(0.071)S(0.071)GPRS(0.781)PLDQR;AS(0.157)S(0.187)S(0.187)GPRS(0.468)PLDQR 174.68 6.847e-07 6170550000.0 4648930.0 4503810.0 4586750.0 3846570.0 4108440.0 4442400.0 4023260.0 4204130.0 5871610.0 4288690.0 True False 4391044.585487805 4287440.20724337 4882419.2440594835 4212146.85628656 4431750.854174052 4414673.33377539 4429970.384033724 4189546.8542813184 4805473.635242904 4250695.543150333 1.033017900461875 1.0086443885994725 1.1486165486321702 0.9909312049116548 1.0425942787917324 1.0385766962042942 1.0421754131914431 0.9856144275099752 1.130514662003152 1.0 22.01926749870421 ASSTS(ph)PVEISEWLDQK ddPTM_KYSE-520_SHP099_60min_R1 2 ASSTSPVEISEWLDQK 16 0 H0YK49;H0YL12;H0YNX6;H0YKF0;H0YLU7;P13804-2;P13804 H0YK49 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial 1 AS(0.112)S(0.112)T(0.112)S(0.665)PVEISEWLDQK;AS(0.084)S(0.084)T(0.084)S(0.747)PVEISEWLDQK 119.31 0.00035584 0.0 137315.0 160518.0 119217.0 106686.0 131313.0 161934.0 118246.0 132135.0 158752.0 137473.0 True False 129697.86321933406 152806.47433756973 126901.91857394441 116825.40536368437 141646.58603123273 160923.3098396328 130199.45964974974 131676.65452554086 129926.63861225128 136255.09617237552 0.9518753196229377 1.121473461398135 0.9313553924867628 0.8574020983104312 1.0395690877648824 1.1810443378649829 0.9555566236218803 0.9663980153737333 0.953554342274889 1.0 17.05595066458413 ASSTST(ph)PEPTR ddPTM_KYSE-520_SHP099_60min_R1 1 ASSTSTPEPTR 11 0 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 ASS(0.001)T(0.004)S(0.184)T(0.811)PEPTR 118.37 0.036994 0.0 712250.0 806800.0 617100.0 477540.0 498130.0 695130.0 455510.0 579130.0 751630.0 636210.0 True False 672740.0726648268 768040.1169685104 656879.2533949097 522925.2580223641 537329.997028001 690791.4358246188 501557.3961491938 577121.1331999586 615152.939050383 630573.6743638905 1.0668698996092294 1.2180021910101038 1.0417169001822915 0.8292849500098146 0.8521288136077806 1.0954967895249903 0.7953985656872757 0.9152318859206202 0.9755449110223898 1.0 19.26630541506152 -5.01643204996267 5.819097055625587 0.9192672289390893 1.1410992355760918 0.49574160341394735 0.08956636528139825 0.12151002898212175 14.975457408452998 0.02362017768165653 0.04502498208473072 9.628706526461654e-06 5.01643204996267 0.22183200663700253 ASSVGVLS(ph)PQKK ddPTM_KYSE-520_SHP099_60min_R1 3 ASSVGVLSPQKK 12 1 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 AS(0.096)S(0.295)VGVLS(0.609)PQKK;ASSVGVLS(1)PQKK;ASSVGVLS(1)PQKK 130.29 4.4473999999999995e-05 5008020000.0 5179800.0 5298700.0 4511400.0 3521570.0 4006800.0 5119100.0 4148000.0 5210200.0 5970200.0 5717200.0 True False 4892466.168324692 5044142.49848915 4802212.06249522 3856258.9540013713 4322112.364426547 5087149.798066275 4567320.320578811 5192127.032269823 4886162.176494549 5666550.05591429 0.8633941498881367 0.8901611119140258 0.8474666269793305 0.6805302902030341 0.7627414073428104 0.8977507915520337 0.8060142900902831 0.9162765670534752 0.8622816578483702 1.0 22.434039221238326 -8.072239033631897 0.7446194054327226 0.9972842815661145 0.8164458053203625 0.4082377189065636 0.06404771824637641 0.846821245234982 1.0599348928543804 0.06843519453886948 0.02600575171446111 8.467612324767211e-09 8.072239033631897 -0.180838476245752 ASSVS(ph)TKESPAR ddPTM_KYSE-520_SHP099_60min_R1 1 ASSVSTKESPAR 12 1 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4 E7ETY2;Q13428 TCOF1 Treacle protein 1 AS(0.096)S(0.386)VS(0.445)T(0.067)KES(0.006)PAR 57.163999999999994 0.038609 9443800000.0 10800000.0 10006000.0 8534500.0 8011300.0 8427200.0 8445900.0 8499200.0 10028000.0 10522000.0 8746200.0 True False 10200902.470733749 9525296.740687793 9084647.52568281 8772691.543314816 9090372.695791004 8393186.005252462 9358382.08019852 9993215.208552793 8611470.038034838 8668715.472440638 1.176749023908352 1.098812940737342 1.0479808172923075 1.0119944034620512 1.048641257714697 0.9682156522423498 1.0795581086898576 1.152790772787845 0.9933963186832244 1.0 23.047386800506587 -4.410344144161565 2.063930269751625 1.0413420472536805 1.1930933355647293 0.4385650885028677 0.049202758370561525 0.5161666997123086 3.0746144650133416 0.01376105237804019 0.1304882757707608 3.887369794818749e-05 4.410344144161565 0.15175128831104878 ASSVS(ph)TKESPARK ddPTM_KYSE-520_SHP099_60min_R1 1 ASSVSTKESPARK 13 2 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4 E7ETY2;Q13428 TCOF1 Treacle protein 1 ASS(0.001)VS(0.422)T(0.422)KES(0.153)PARK 88.19 0.0022600000000000003 2186700000.0 948350.0 832880.0 776560.0 745950.0 842540.0 799660.0 739200.0 775000.0 1066800.0 862660.0 True False 895743.1350111453 792867.1946216326 826618.3001399323 816844.8637219542 908843.1046031595 794669.0253211838 813925.5498967839 772311.705886359 873096.0118395335 855017.5035393246 1.0476313424032115 0.9273110682992777 0.9667852373994281 0.955354551621042 1.0629526306081747 0.929418429484391 0.9519402193844669 0.9032700531736404 1.0211440212923983 1.0 19.705594428951024 ASSVSTKES(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 12 ASSVSTKESPAR 12 1 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4 E7ETY2;Q13428 TCOF1 Treacle protein 1 ASSVST(0.001)KES(0.998)PAR;ASSVS(0.004)T(0.013)KES(0.984)PAR;ASSVST(0.001)KES(0.999)PAR;ASSVS(0.003)T(0.4)KES(0.597)PAR;ASSVSTKES(1)PAR;ASSVSTKES(1)PAR;ASSVST(0.02)KES(0.98)PAR;ASSVS(0.006)T(0.224)KES(0.77)PAR;ASSVS(0.001)T(0.022)KES(0.977)PAR;ASSVSTKES(1)PAR;ASSVSTKES(1)PAR;ASSVSTKES(1)PAR 304.93 1.1809e-30 140021200000.0 95831200.0 89792800.0 76374140.0 79326180.0 75889160.0 81468200.0 76033400.0 88678400.0 105158200.0 86171200.0 True False 90515252.30123891 85479019.10625935 81297339.2673447 86865316.29691437 81861205.14174524 80959726.74470554 83719598.08647464 88370795.32809417 86064121.70249729 85407790.20817906 1.059800892642352 1.0008339859620143 0.951872646150717 1.0170654935010335 0.9584746888101294 0.9479196985119099 0.9802337454512112 1.0346924456503659 1.00768467949725 1.0 26.347864331037762 -10.243437026981923 4.485486047677902 1.0000027710584838 0.9931419862519717 0.0 0.03482743085005339 1.0073532026141192e-06 1.6984685355481936e-07 0.03519693402055703 0.008533062378456996 5.70903851647252e-11 10.243437026981923 -0.006860784806512088 ASSVSTKES(ph)PARK ddPTM_KYSE-520_SHP099_60min_R1 13 ASSVSTKESPARK 13 2 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4 E7ETY2;Q13428 TCOF1 Treacle protein 1 ASSVSTKES(1)PARK;AS(0.007)S(0.007)VS(0.007)T(0.007)KES(0.971)PARK;ASSVSTKES(1)PARK;ASSVS(0.004)T(0.003)KES(0.992)PARK;ASSVS(0.002)T(0.002)KES(0.997)PARK;ASSVST(0.001)KES(0.999)PARK;ASSVS(0.001)T(0.001)KES(0.999)PARK;ASS(0.001)VS(0.255)T(0.255)KES(0.49)PARK;ASS(0.001)VS(0.012)T(0.293)KES(0.694)PARK;ASSVS(0.004)T(0.011)KES(0.985)PARK;ASSVS(0.001)T(0.04)KES(0.959)PARK;ASSVST(0.004)KES(0.996)PARK;ASSVS(0.002)T(0.002)KES(0.996)PARK 224.06 1.9728e-10 60211620000.0 37758330.0 35357440.0 35456500.0 32520940.0 32516050.0 33226040.0 31460990.0 31258620.0 43167850.0 32700280.0 True False 35663800.16553522 33658815.5098006 37742082.722405866 35611720.35982287 35074878.14398316 33018663.959786292 34641373.898873344 31150191.14303674 35329656.61294262 32410580.959632836 1.1003752203625798 1.0385131803629941 1.1644988027031475 1.0987683437139566 1.0822045488067211 1.0187618667160214 1.0688291561949768 0.9611117795708166 1.0900655146214588 1.0 24.9499615454063 -6.138103839580404 3.2999427935632926 1.0276068896012946 1.1001354651889665 0.391405140481632 0.04344653379574277 0.27079505989670455 5.517886827253791 0.014629374131380405 0.014684943532484559 7.276058135727565e-07 6.138103839580404 0.0725285755876719 AST(ph)PDWVSEGPQPGLR ddPTM_KYSE-520_SHP099_60min_R1 5 ASTPDWVSEGPQPGLR 16 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 AS(0.07)T(0.93)PDWVSEGPQPGLR;AS(0.49)T(0.51)PDWVSEGPQPGLR;AS(0.022)T(0.978)PDWVSEGPQPGLR;AS(0.003)T(0.997)PDWVSEGPQPGLR;AS(0.141)T(0.859)PDWVSEGPQPGLR 285.04 1.3519e-36 5704620000.0 2839650.0 3052560.0 2325070.0 2151660.0 2220260.0 2894300.0 2387270.0 2988120.0 3509140.0 3288120.0 True False 2682128.9537980678 2905910.4356140257 2474947.732443534 2356153.1194798313 2394981.830448662 2876235.6001139265 2628598.5491099767 2977754.9091524472 2871968.6342206416 3258989.8149186503 0.8229939662652852 0.891659870279945 0.7594217450800204 0.7229703844713135 0.7348847239365934 0.8825543384478856 0.8065685069272274 0.9137048834952486 0.8812450474909909 1.0 21.635993412658916 -7.716347696786844 0.7883551879325945 0.9928090932606177 0.7932704460521871 0.5692792044541994 0.05484367394811526 0.4750263061197201 0.6396694870239448 0.05651528897440164 0.022323247861422174 1.921552715056626e-08 7.716347696786844 -0.19953864720843062 AST(ph)PVLK ddPTM_KYSE-520_SHP099_60min_R1 4 ASTPVLK 7 0 Q04724;A0A669KBK8;F6T2C8;A0A669KAE5 Q04724 TLE1 Transducin-like enhancer protein 1 1 AS(0.072)T(0.928)PVLK;AS(0.08)T(0.92)PVLK;AS(0.053)T(0.947)PVLK;AS(0.057)T(0.943)PVLK 111.95 0.013788 1538590000.0 7880900.0 8612700.0 6207100.0 4911300.0 5668800.0 7055100.0 5436300.0 6727900.0 8335500.0 7482300.0 True False 7443730.766815333 8198932.964073734 6607219.597711147 5378068.47536381 6114902.308940107 7011066.503943526 5985854.257175173 6704562.485203667 6821983.320855295 7416012.6431413125 1.0037376046951128 1.105571600077638 0.8909396350371414 0.725196778128164 0.8245539217891523 0.9453957053899712 0.8071526499770979 0.9040656762369965 0.91989909525904 1.0 22.822212272859048 -4.832549650595347 6.378819046114463 0.8651366045171466 1.0538029481451636 0.4556185804906403 0.07697606173190642 0.15411137867414185 10.622232346286118 0.0201715494194965 0.04320729452774114 1.4704502969751872e-05 4.832549650595347 0.18866634362801704 AST(ph)PYIEK ddPTM_KYSE-520_SHP099_60min_R1 1 ASTPYIEK 8 0 C9J618;C9J5A2;C9J347;C9J7P5;C9IZN7;Q969Z0-2;Q969Z0 C9J618 TBRG4 Protein TBRG4 1 AST(1)PYIEK 163.43 0.00092126 301130000.0 630750.0 753870.0 552640.0 531780.0 572230.0 741860.0 524840.0 699470.0 891660.0 626610.0 True False 595761.0401310485 717652.95361806 588264.0586552636 582320.2113145135 617261.2454566746 737229.7765610061 577895.9491447883 697043.7018275246 729757.0209194217 621058.7228952035 0.9592668425197795 1.1555315579057661 0.9471955500647986 0.9376250422824723 0.9938854776552754 1.1870532517830927 0.9305013001843009 1.1223474949004826 1.1750209666446627 1.0 19.24437016031308 ASTNS(ph)ETNRGESEK ddPTM_KYSE-520_SHP099_60min_R1 2 ASTNSETNRGESEK 14 1 J3KS94;J3QQK6;P02686-2;P02686;J3QKN5 J3KS94 MBP Myelin basic protein 1 AST(0.006)NS(0.497)ET(0.497)NRGES(0.001)EK;AST(0.001)NS(0.998)ET(0.001)NRGESEK 192.4 5.178199999999999e-09 904820000.0 880720.0 719090.0 701100.0 738210.0 736980.0 718940.0 657600.0 753000.0 945850.0 707510.0 True False 831864.7059282064 684543.837023905 746294.0277996626 808369.2564490702 794976.1331574025 714452.828782747 724076.6255575275 750388.0187515221 774107.482938154 701242.011834451 1.1862733434239716 0.976187714756474 1.0642460309064419 1.1527678644557733 1.1336687188460697 1.0188391692530465 1.0325630999536681 1.0700842306759473 1.1039091638464256 1.0 19.41955290585883 -6.267036195326522 24.9117635419217 1.048677146744887 1.0962573680048644 0.18556257588380576 0.05930062522045311 989.6395411628663 4404920.736628236 0.021256238816924188 0.01926948508405062 5.4070925683376e-07 6.267036195326522 0.04758022125997741 ASTRGPPSRK ddPTM_KYSE-520_SHP099_60min_R1 4 ASTRGPPSRK 10 2 E9PNM5;Q8IV01 E9PNM5 SYT12 Synaptotagmin-12 0 ;;; 67.169 0.031538 1649860000.0 784600.0 697430.0 660910.0 550750.0 630130.0 690030.0 615730.0 684690.0 829770.0 681590.0 False True 741076.6739386773 663924.4159362274 703513.3160933886 603093.1144109744 679717.646050739 685723.2668163677 677973.9973457066 682314.9701978466 679104.6847994846 675551.6428689961 1.096994851187695 0.9827885446575348 1.041390874435065 0.8927416886290173 1.006166816742611 1.0150567673911262 1.003585742855162 1.010011562254704 1.0052594675299715 1.0 19.365706535717074 -4.257195216989807 24.6156432704095 0.9949986816857568 1.0969949014681917 0.4046508454064186 0.037032811799912156 359.44748763677035 2084654.5757562038 0.009157027668145272 0.06994048068783813 5.5310143217211715e-05 4.257195216989807 0.1019962197824349 ASTRS(ph)PTQR ddPTM_KYSE-520_SHP099_60min_R1 4 ASTRSPTQR 9 1 A0A2R8Y575;Q5VVD7;Q8IWE5 A0A2R8Y575 PLEKHM2 Pleckstrin homology domain-containing family M member 2 1 AS(0.001)T(0.001)RS(0.924)PT(0.074)QR;AS(0.007)T(0.007)RS(0.975)PT(0.01)QR;AS(0.002)T(0.004)RS(0.987)PT(0.006)QR;AS(0.021)T(0.021)RS(0.913)PT(0.044)QR 118.28 0.00052201 2683780000.0 556255.0 484330.0 486023.0 417899.0 446683.0 520862.0 440077.0 383926.0 630869.0 512537.0 True False 525398.4262831489 461062.05980584846 517352.82024429465 457615.9953140842 481834.41082138923 517611.10705405136 484564.2778976278 382594.25031500164 516319.092513306 507996.32092775183 1.034256360998079 0.9076090530809603 1.0184184391325022 0.9008254124327943 0.9484998039777469 1.0189268814166608 0.9538735969832809 0.7531437424906369 1.0163835272868793 1.0 18.954458523011994 -7.022663387871747 24.988172872322217 0.9015599248595184 0.9680733923045293 0.04819778988014578 0.07935017969219697 1583.9916798568252 1746469.098855638 0.0346400594299029 0.020199635163617103 9.491538466046124e-08 7.022663387871747 0.06651346744501085 ASTSDYQVISDRQT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 ASTSDYQVISDRQTPK 16 1 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 ASTSDYQVISDRQT(1)PK;ASTSDYQVIS(0.001)DRQT(0.999)PK;ASTSDYQVISDRQT(1)PK;ASTSDYQVIS(0.029)DRQT(0.971)PK 218.11 1.9274e-17 2475100000.0 2148280.0 2230310.0 1855270.0 1615700.0 1599910.0 1952720.0 1679810.0 1935040.0 2382830.0 2117040.0 True False 2029110.6259099918 2123162.5598364407 1974863.6727369567 1769255.6422220815 1725813.814757331 1940532.3501552946 1849621.5881657402 1928327.797881729 1950168.1382560898 2098284.672632199 0.9670330496026398 1.0118562974455863 0.9411800498259294 0.8431914245470964 0.822487928957885 0.9248184364426533 0.8814922075589856 0.919001993882333 0.9294106579969896 1.0 21.000778989819956 -4.994441764762706 6.206885158570755 0.8957967938628764 0.9872291326544108 0.3377058010014057 0.04768861056344754 0.14689333305469057 24.557046647256378 0.012709983336419001 0.025355906790166024 1.0128805584726983e-05 4.994441764762706 0.09143233879153445 ASTSSSSSSSSNQQTEKET(ph)NTPK ddPTM_KYSE-520_SHP099_60min_R1 2 ASTSSSSSSSSNQQTEKETNTPK 23 1 C9J2P0;P51965-3;P51965 C9J2P0 UBE2E1 Ubiquitin-conjugating enzyme E2 E1 1 ASTSSSSSSSSNQQT(0.005)EKET(0.702)NT(0.293)PK;ASTSSSSSSSSNQQTEKET(0.5)NT(0.5)PK 178.91 1.4191999999999999e-10 748230000.0 759200.0 1103150.0 686440.0 559100.0 503600.0 818770.0 569800.0 677540.0 1023200.0 780770.0 True False 717085.6625723211 1050153.0181380925 730689.0207428327 612236.6959004562 543230.4549079591 813659.7527226888 627400.9447121032 675189.7718790241 837412.6727729766 773852.9852298686 0.9266432723772655 1.357044604313506 0.9442220094631872 0.7911537560569012 0.701981468413662 1.051439702698822 0.8107495308372267 0.8725039313229023 1.0821340600297975 1.0 19.561699987026884 -4.977377705754574 24.52828544828151 0.8885360565307319 1.1440415833275517 0.2879755275597069 0.14821201285759758 201.4924982662191 218465.42287879504 0.03723654492342966 0.07750545992092331 1.0534702951286951e-05 4.977377705754574 0.2555055267968198 ASTSSSSSSSSNQQTEKETNT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 ASTSSSSSSSSNQQTEKETNTPK 23 1 C9J2P0;P51965-3;P51965 C9J2P0 UBE2E1 Ubiquitin-conjugating enzyme E2 E1 1 ASTSSSSSSSSNQQTEKET(0.118)NT(0.882)PK;ASTSSSSSSSSNQQTEKET(0.125)NT(0.874)PK;ASTSSSSSSSSNQQTEKET(0.026)NT(0.974)PK 214.3 2.0904e-20 670850000.0 973180.0 1362230.0 881530.0 735540.0 679340.0 966800.0 743490.0 833150.0 1233140.0 1007250.0 True False 919195.7654137659 1296786.4260510833 938354.8342978698 805445.5004518357 732800.1930841407 960765.8425837501 818649.2249631478 830259.9971086725 1009232.8609296979 998326.5486286425 0.9207365732950055 1.298960172733483 0.9399277576929581 0.8067956337114754 0.73402855417474 0.9623763325772636 0.8200214910518913 0.8316517258297542 1.0109245940779967 1.0 19.92915226698295 -4.984215079261523 24.39609747074824 0.8689306255990694 1.1122474777820552 0.3598720269382676 0.1197717708972678 161.90962615664148 250231.98473410172 0.029538870590397982 0.06145648960790029 1.0370147192193274e-05 4.984215079261523 0.24331685218298582 ASTVS(ph)PGGYMVPK ddPTM_KYSE-520_SHP099_60min_R1 1 ASTVSPGGYMVPK 13 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 ASTVS(1)PGGYMVPK 192.65 2.1071e-08 1055500000.0 1011900.0 1075200.0 896380.0 872190.0 873330.0 995130.0 705980.0 924950.0 1169400.0 960210.0 True False 955767.8898273613 1023545.778091896 954162.0890587105 955082.675366514 942056.1024320255 988919.0245452692 777347.3481008264 921741.5643349524 957066.4381750579 951703.286432076 1.0042708725011589 1.0754883299070623 1.002583581103153 1.003550885010713 0.9898632439988542 1.0391043496894021 0.8167959060171917 0.9685177906556888 1.0056353191372158 1.0 19.86015232747049 ASVALT(ph)PTAPSR ddPTM_KYSE-520_SHP099_60min_R1 3 ASVALTPTAPSR 12 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7;H7BZ26 P28290-3 SSFA2 Sperm-specific antigen 2 1 ASVALT(0.951)PT(0.049)APSR;ASVALT(0.761)PT(0.239)APSR;ASVALT(0.994)PT(0.006)APSR 180.61 2.5033000000000002e-06 2990220000.0 2274080.0 3091120.0 2043160.0 1511630.0 1746300.0 2462500.0 1826820.0 2162630.0 2663820.0 2249170.0 True False 2147932.2491339114 2942617.955334288 2174865.3627715865 1655294.8607118677 1883723.8749121702 2447130.6240820074 2011492.79364508 2155128.3412916367 2180137.437437558 2229244.1036277823 0.9635249211328866 1.3200070600368932 0.9756066458726068 0.7425363862208303 0.8450056554357029 1.0977400905085475 0.9023205625492773 0.9667529624882566 0.9779716065592323 1.0 21.088123170583707 -4.9776095123508295 24.403831073132555 0.927959383162399 1.1432764780327724 0.31989692375700374 0.1197857178600297 188.92927883022568 205914.3431982426 0.031041080244380632 0.06460909433687066 1.0529081507465777e-05 4.9776095123508295 0.21531709487037343 ASVALTPTAPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 ASVALTPTAPSR 12 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7;H7BZ26 P28290-3 SSFA2 Sperm-specific antigen 2 1 ASVALTPT(0.002)APS(0.998)R;ASVALTPTAPS(1)R;ASVALTPTAPS(1)R 159.12 3.9845e-06 3216320000.0 2215480.0 2132160.0 2085940.0 1979675.0 1772760.0 2152100.0 2270390.0 2703930.0 2776550.0 2830220.0 True False 2092582.9079501156 2029727.8331625923 2220403.0300220028 2167822.716789008 1912266.126375365 2138667.9456190383 2499903.1780710993 2694550.697932006 2272398.5111296023 2805146.4526778385 0.7459799134382099 0.7235728570338925 0.7915462053335468 0.7728019742853601 0.6816992120143619 0.7624086591191811 0.8911845496282916 0.9605739819251661 0.8100819509656381 1.0 21.419644663165894 -6.773353645104372 4.092622035825372 0.9157371710887706 0.7441645414886923 0.7145894771586461 0.05267685484073689 0.11477082010677905 4.332277550569515 0.021556651790404183 0.015009087928352172 1.685180227734139e-07 6.773353645104372 -0.17157262960007835 ASVS(ph)PMDEPVPDSESPIEK ddPTM_KYSE-520_SHP099_60min_R1 3 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 AS(0.154)VS(0.846)PMDEPVPDSESPIEK;AS(0.021)VS(0.979)PMDEPVPDSESPIEK;AS(0.003)VS(0.997)PMDEPVPDSESPIEK 263.15 3.9965e-35 1248830000.0 3640770.0 3782510.0 2921720.0 2817860.0 2850920.0 3629230.0 2853370.0 3890320.0 4387330.0 3757440.0 True False 3438809.230404943 3600792.5419367393 3110058.746117287 3085668.5671795015 3075271.184484111 3606578.6293754834 3141816.485807608 3876825.387927517 3590701.4675889993 3724152.004844083 0.9233804704888553 0.9668758249537378 0.8351052110848236 0.8285560211199509 0.8257641418728454 0.9684294907093831 0.8436327200718394 1.040995475717653 0.9641661948595273 1.0 21.828480528407585 -7.262008423601256 24.99966460082149 1.0019356293897534 0.8846139350520897 0.4987100784034202 0.05383978610609438 45.95688904003791 2018889.047192275 0.028615560747659637 0.015075250127982527 5.470053530431505e-08 7.262008423601256 -0.1173216943376637 ASVSPMDEPVPDSES(ph)PIEK ddPTM_KYSE-520_SHP099_60min_R1 10 ASVSPMDEPVPDSESPIEK 19 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ASVSPMDEPVPDS(0.001)ES(0.999)PIEK;ASVSPMDEPVPDS(0.01)ES(0.99)PIEK;ASVSPMDEPVPDSES(1)PIEK;ASVSPMDEPVPDS(0.002)ES(0.998)PIEK;ASVSPMDEPVPDSES(1)PIEK;ASVSPMDEPVPDSES(1)PIEK;ASVSPMDEPVPDSES(1)PIEK;ASVSPMDEPVPDSES(1)PIEK;ASVSPMDEPVPDSES(1)PIEK;ASVSPMDEPVPDSES(1)PIEK 391.64 2.5070999999999995e-92 9538970000.0 12729340.0 15537000.0 10061000.0 9164680.0 10005220.0 14173040.0 10364720.0 13740470.0 15633360.0 14801420.0 True False 12023218.134889828 14790579.198487528 10709548.158169162 10035688.431738477 10792573.892085405 14084580.80013777 11412487.047519196 13692807.516619815 12794735.908934858 14670290.934130512 0.8195623514812338 1.0081994464116022 0.7300160716822145 0.6840824409548957 0.7356755186753947 0.9600750839487385 0.7779318827936794 0.9333698682664447 0.8721528404844265 1.0 23.806394146338405 -7.272916179843397 24.095318209752897 0.9270710384889652 0.8178721909008009 0.22911523552450042 0.09939477874205502 837.559362394889 1758424.6682165677 0.05682770912609797 0.027705573312131002 5.3343784067948184e-08 7.272916179843397 -0.10919884758816434 ASVSQTS(ph)PQSASSPR ddPTM_KYSE-520_SHP099_60min_R1 1 ASVSQTSPQSASSPR 15 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 ASVSQT(0.062)S(0.593)PQS(0.192)AS(0.083)S(0.069)PR 218.45 3.0942000000000005e-14 611750000.0 496440.0 568950.0 419350.0 401420.0 443970.0 592440.0 429840.0 510040.0 634290.0 694310.0 True False 468901.4835713957 541616.7879886397 446381.9719837235 439570.83610867604 478907.9131562475 588742.3622055406 473292.42203413654 508270.79028423096 519118.9251496977 688158.9535650053 0.6813854286749493 0.7870518652453704 0.6486611409634985 0.6387635208863892 0.6959262982415132 0.8555325178224633 0.6877661324934401 0.7385950406532323 0.754359036470286 1.0 19.392382317028645 -13.99999999999874 0.23643570233391065 2.57452827016429 0.6916846771886496 0.6724519169373893 0.05983197691243806 103.37169382230262 1.0334106976782649 77.97200189402916 0.10205193568897347 1.0000000000029e-14 13.99999999999874 -1.8828435929756404 ASVSQTSPQSASS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 ASVSQTSPQSASSPR 15 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 ASVSQT(0.006)S(0.077)PQS(0.041)AS(0.011)S(0.865)PR;ASVSQTSPQSAS(0.006)S(0.994)PR;ASVSQTS(0.002)PQS(0.182)AS(0.079)S(0.738)PR;ASVSQT(0.001)S(0.015)PQS(0.008)AS(0.171)S(0.805)PR 241.11 9.0135e-19 2793920000.0 2059360.0 2463310.0 1779120.0 1615540.0 1593480.0 2272940.0 1782090.0 2282940.0 2573400.0 2339600.0 True False 1945123.195567616 2344968.890096308 1893804.921892649 1769080.4358701874 1718877.8103390292 2258753.738355718 1962241.0487223468 2275021.013982204 2106135.430134846 2318872.964181256 0.8388226632563276 1.0112537108837552 0.8166919668069487 0.7629052833839958 0.7412557034774554 0.9740739459409047 0.8462046343341503 0.981089110582418 0.9082582196901317 1.0 21.144992355687645 -7.066287621714602 1.2448818111189786 0.9659789906666169 0.8474759353759513 0.2585768219917678 0.08198298894024622 0.7599870508225774 2.182574901237705 0.06754219191287965 0.0297689193928168 8.58444807980343e-08 7.066287621714602 -0.11850305529066552 ASYDVSDSGQLEHVQPWS(ph)V ddPTM_KYSE-520_SHP099_60min_R1 4 ASYDVSDSGQLEHVQPWSV 19 0 Q01813-2;Q01813;B1APP6 Q01813-2 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 ASYDVSDSGQLEHVQPWS(1)V;ASYDVSDSGQLEHVQPWS(1)V;ASYDVSDSGQLEHVQPWS(1)V;ASYDVSDSGQLEHVQPWS(1)V 309.67 2.797e-53 933160000.0 930330.0 1000920.0 931060.0 1015480.0 850367.0 953420.0 829850.0 823375.0 1035630.0 887340.0 True False 878722.7403331249 952834.3007884508 991077.6173486718 1111990.9138848055 917286.0449736218 947469.3521268086 913739.3365555276 820518.9043021692 847585.6981077774 879478.8579400728 0.9991402663064364 1.0834078524868602 1.1268919183230706 1.264374809974768 1.0429881704286805 1.0773077073688662 1.0389554317379501 0.9329603513426118 0.9637362973033872 1.0 19.74628937116574 -6.867712640597781 1.6998392014415202 0.960771654396533 1.110450395187568 0.4406513853595738 0.06691046144810806 0.3523930476155363 2.0532295443910984 0.041494652244792055 0.023199404187256925 1.3560863965400295e-07 6.867712640597781 0.14967874079103494 ASYNNPHR ddPTM_KYSE-520_SHP099_60min_R1 6 ASYNNPHR 8 0 P54725-2;P54725-3;P54725;A0A494C0B4;K7ELU6 P54725-2 RAD23A UV excision repair protein RAD23 homolog A 0 ;;;;; 113.71 0.0017631 1291735000.0 1028560.0 1110100.0 780762.0 940400.0 1074640.0 1013560.0 726993.0 849945.0 946440.0 765085.0 False True 971503.726416473 1056769.12970593 831091.1677833693 1029775.33325843 1159208.0541348082 1007233.9960790086 800484.5472079441 846996.7391736534 774590.3538108445 758306.9421271237 1.281148401056849 1.3935902086582395 1.0959825390126046 1.3579927547146164 1.5286792059203869 1.3282668799702935 1.055620755577561 1.1169576488351094 1.0214733780994332 1.0 19.53242240495849 -6.758855546371242 9.659136096538337 1.0580563767790538 1.3334659069303234 0.6353078657412768 0.10472172285039524 0.07488558810724698 105.17881231914163 0.04424095723140928 0.03223083940335817 1.7423863239337916e-07 6.758855546371242 0.27540953015126957 AT(ph)NESEDEIPQLVPIGK ddPTM_KYSE-520_SHP099_60min_R1 1 ATNESEDEIPQLVPIGK 17 0 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 AT(0.615)NES(0.385)EDEIPQLVPIGK 102.08 0.0010093 2966200000.0 2092700.0 2208000.0 1772200.0 1362100.0 1501400.0 2245800.0 1553200.0 2013300.0 2528000.0 2217500.0 True False 1976613.7593059763 2101924.3657244304 1886438.8476202541 1491553.574469703 1619551.6382025587 2231783.1291627903 1710212.6137712153 2006316.3322077545 2068978.925693982 2197854.6751888953 0.8993377868061707 0.9563527513682313 0.8583091816378277 0.678640672337224 0.7368784007811462 1.0154370779637552 0.7781281597356888 0.9128521347915421 0.9413629340694071 1.0 21.067664566022778 -7.773077108930791 1.4707337273045356 0.9987139717598268 0.8451238955987567 0.2230335871435457 0.09477928193686608 0.6276440924215375 2.746878507987945 0.09527903420813473 0.029230464539055596 1.6862536046924564e-08 7.773077108930791 -0.15359007616107012 AT(ph)PAQTPR ddPTM_KYSE-520_SHP099_60min_R1 2 ATPAQTPR 8 0 A0A3B3ITP6;A0A3B3IS57;A0A3B3IT92;P33991;E5RFR3;E5RG53 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 AT(1)PAQTPR;AT(1)PAQTPR 148.56 0.00073792 1519780000.0 669950.0 672160.0 598720.0 453410.0 601870.0 669000.0 570490.0 591540.0 693330.0 657690.0 True False 632786.5379877855 639868.4246672707 637314.449185871 496501.9500773125 649233.744828143 664824.522847051 628160.6966458544 589488.0858064743 567438.7494269817 651863.3782750779 0.9707349102234085 0.9815989760928931 0.977681014804505 0.761665659744725 0.9959659745667977 1.0198832224725833 0.9636385745553859 0.9043123228771381 0.870487234500739 1.0 19.31421010125714 -10.06380131392584 4.58948015007822 1.0000028319160705 0.9394896886653458 0.06131234369339167 0.07215543236380716 2.343928552627707e-06 4.781447049840545e-07 0.07257695651267947 0.017601608473462805 8.63373443520978e-11 10.06380131392584 -0.060513143250724766 AT(ph)PPPS(ph)PLLSELLK ddPTM_KYSE-520_SHP099_60min_R1 12 ATPPPSPLLSELLK 14 0 Q9H0E9-2;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;H7C128 Q9H0E9-2 BRD8 Bromodomain-containing protein 8 2 AT(1)PPPS(1)PLLSELLK;AT(1)PPPS(0.999)PLLS(0.001)ELLK;AT(1)PPPS(1)PLLSELLK;AT(1)PPPS(1)PLLSELLK;AT(1)PPPS(1)PLLSELLK;AT(1)PPPS(1)PLLSELLK;AT(1)PPPS(1)PLLSELLK;AT(1)PPPS(1)PLLSELLK;AT(1)PPPS(1)PLLSELLK;AT(1)PPPS(1)PLLSELLK;AT(1)PPPS(0.999)PLLS(0.001)ELLK;AT(1)PPPS(1)PLLSELLK 208.39 2.6132e-13 6542690000.0 2923070.0 2805065.0 2499548.0 2663991.0 2913780.0 2923720.0 3184340.0 3463530.0 4275380.0 3273710.0 True False 2760921.480104419 2670305.4669115986 2660672.8634982025 2917175.903681898 3143077.9088596376 2905471.978981135 3506244.1633635294 3451515.8228239804 3499078.7655591564 3244707.4763078415 0.8508999656406859 0.8229726366427781 0.8200039242137744 0.8990566715127608 0.9686783575436981 0.8954495898925461 1.0806040880311623 1.0637371313211466 1.0783957540421376 1.0 21.629656988533803 -6.165809205093729 0.8635875666620064 1.0638823787419118 0.8270743889459472 0.8005737432172737 0.04414374380893446 0.24758775204524786 0.402642194877866 0.027086367079155422 0.027986558264322843 6.826385260615466e-07 6.165809205093729 -0.23680798979596462 AT(ph)PPPS(ph)PLLSELLKK ddPTM_KYSE-520_SHP099_60min_R1 5 ATPPPSPLLSELLKK 15 1 Q9H0E9-2;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;H7C128 Q9H0E9-2 BRD8 Bromodomain-containing protein 8 2 AT(1)PPPS(0.998)PLLS(0.002)ELLKK;AT(1)PPPS(0.999)PLLS(0.001)ELLKK;AT(1)PPPS(1)PLLSELLKK;AT(1)PPPS(0.998)PLLS(0.002)ELLKK;AT(1)PPPS(1)PLLSELLKK 92.31 0.0023584 1811690000.0 1556530.0 1648470.0 1706820.0 1311620.0 1451750.0 1445070.0 1391710.0 1433440.0 2507010.0 1474160.0 True False 1470186.1780343717 1569275.0267960827 1816844.3482085587 1436275.9704470679 1565994.4656724187 1436050.7821084992 1532397.6285806983 1428467.7312074113 2051800.1805791412 1461100.089279125 1.0062186627883443 1.0740366374012946 1.24347699486142 0.9830099806206262 1.0717913695050463 0.982855858161651 1.048797163058658 0.9776658982425949 1.404284481011465 1.0 20.47862357933464 AT(ph)PPPSPLLSELLK ddPTM_KYSE-520_SHP099_60min_R1 3 ATPPPSPLLSELLK 14 0 Q9H0E9-2;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;H7C128 Q9H0E9-2 BRD8 Bromodomain-containing protein 8 1 AT(0.999)PPPS(0.001)PLLSELLK;AT(1)PPPSPLLSELLK;AT(0.998)PPPS(0.002)PLLSELLK 134.21 3.7195e-05 2812700000.0 603474.0 695999.0 507268.0 453189.0 433511.0 611069.0 462707.0 544468.0 610831.0 565081.0 True False 569998.0942244063 662562.1633242029 539967.3069374971 496259.94630375825 467625.849359818 607255.0917064631 509481.9391451445 542579.3675877869 499919.48819643236 560074.8219663649 1.017717761750478 1.1829886603329454 0.9640985199829688 0.8860600884743235 0.8349346034125081 1.0842392264205936 0.9096676357569619 0.9687622908718637 0.8925941116961242 1.0 19.0952600481591 -4.887063972866699 6.802466454820349 0.9376871509938344 1.0989288421686807 0.4176277993869125 0.07491920835835277 0.18483955441408295 10.24637433773383 0.019152853176111873 0.04049435406148288 1.2969882066982476e-05 4.887063972866699 0.16124169117484632 AT(ph)PPPSPLLSELLKK ddPTM_KYSE-520_SHP099_60min_R1 2 ATPPPSPLLSELLKK 15 1 Q9H0E9-2;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;H7C128 Q9H0E9-2 BRD8 Bromodomain-containing protein 8 1 AT(0.998)PPPS(0.002)PLLSELLKK;AT(0.999)PPPS(0.001)PLLSELLKK 88.781 0.0043791 2980500000.0 1528130.0 1686770.0 1598660.0 962960.0 1107520.0 1230900.0 905170.0 891210.0 1579880.0 1026630.0 True False 1443361.5826483674 1605735.0373066142 1701712.1815464383 1054479.428875519 1194675.5230731992 1223217.4965208273 996673.4172078897 888118.6005199772 1293013.6175337853 1017534.8569060541 1.4184885882308684 1.5780639124138298 1.6723871128314105 1.036307917825832 1.1740880569986214 1.2021381756298528 0.9794980589052288 0.8728139330975022 1.2707315221272713 1.0 19.95664678595246 -5.26680591143588 24.955437825734112 1.076469619972332 1.558488283988925 0.7579810235579569 0.12423985770939412 203.18928435470406 944870.9396079654 0.03560427916258793 0.05457955413220492 5.409960430001943e-06 5.26680591143588 0.4820186640165929 AT(ph)PSENLVPSSAR ddPTM_KYSE-520_SHP099_60min_R1 3 ATPSENLVPSSAR 13 0 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 AT(0.911)PS(0.089)ENLVPSSAR;AT(0.688)PS(0.312)ENLVPSSAR;AT(0.978)PS(0.022)ENLVPSSAR 116.87 0.0005739 1659830000.0 626690.0 552830.0 484760.0 511590.0 475220.0 595090.0 540770.0 616940.0 573400.0 626550.0 True False 591926.2564244571 526271.216985252 516008.4052434237 560211.3597848581 512617.1103680708 591375.8225725731 595436.3090066069 614799.9791348785 469285.0142377094 620999.2544485243 0.9531835218548121 0.8474586937348336 0.8309324069988824 0.9021127735207207 0.8254713780989933 0.9522971538794226 0.9588357872271224 0.9900172580413948 0.7556933617488091 1.0 19.244232010830938 -6.275967943045215 24.81708597230954 0.932461484015674 0.8698877868353059 0.14482462589121825 0.07223584986790342 1421.9505882872736 2428909.2303249883 0.02467675183803284 0.021860491429136788 5.297025418412119e-07 6.275967943045215 -0.06257369718036809 AT(ph)PTKAPAPVVLGSPVVLGPPVGQAR ddPTM_KYSE-520_SHP099_60min_R1 2 ATPTKAPAPVVLGSPVVLGPPVGQAR 26 1 A0A0C4DFM2;Q6ZN55;Q6ZN55-2 A0A0C4DFM2 ZNF574 Zinc finger protein 574 1 AT(0.991)PT(0.009)KAPAPVVLGSPVVLGPPVGQAR;AT(0.965)PT(0.035)KAPAPVVLGSPVVLGPPVGQAR 180.62 1.5291e-10 1586900000.0 1158380.0 1359900.0 1210280.0 945340.0 1022220.0 1340910.0 993310.0 1286190.0 1461520.0 1437690.0 True False 1094122.3522267204 1294568.3627484862 1288296.585316468 1035184.8293731661 1102662.8983638089 1332540.883304692 1093723.4685713935 1281728.5070890023 1196144.8099209927 1424953.185105893 0.7678303846490315 0.908498873001419 0.9040974810837245 0.7264693606732336 0.773823947263128 0.9351471313113114 0.7675504570980802 0.8994881519519904 0.8394274439493976 1.0 20.44248309160154 -9.036442428448634 0.6137244228667265 1.0103084878732773 0.8303832307639205 0.34185301840339744 0.06941964552764683 5.718209672944228 2.4245689625190656 0.21535076982151372 0.028568840600053703 9.195123604061368e-10 9.036442428448634 -0.1799252571093568 AT(ph)SFSSAGEVPKPRPPSTR ddPTM_KYSE-520_SHP099_60min_R1 1 ATSFSSAGEVPKPRPPSTR 19 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8 O15231-3 ZNF185 Zinc finger protein 185 1 AT(0.491)S(0.491)FS(0.018)SAGEVPKPRPPSTR 127.01 1.3859e-05 1516700000.0 145650.0 112030.0 126480.0 136310.0 159890.0 142250.0 140050.0 168280.0 168420.0 133770.0 True False 137570.50415392348 106647.9106395416 134633.10317515506 149264.86141690426 172472.4333503448 141362.16498504183 154207.62075628332 167696.27595684724 137839.17352269805 132584.9018714852 1.0376030921474817 0.8043744735197348 1.015448224305775 1.1258058746506971 1.300845201194346 1.0662010756101359 1.1630858308871177 1.264821812964764 1.0396294870460125 1.0 17.016556972094687 -5.12910018398168 3.2867976995924537 1.153619439195814 0.9192145207258541 0.4094965927642841 0.10368431107058038 0.2063694700174877 4.152215950260898 0.027592453835802975 0.052948377219288224 7.428477564179335e-06 5.12910018398168 -0.2344049184699598 AT(ph)SNVFAMFDQSQIQEFK ddPTM_KYSE-520_SHP099_60min_R1 10 ATSNVFAMFDQSQIQEFK 18 0 J3QRS3;P19105;O14950;P24844;J3KTJ1;P24844-2 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 1 AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.587)S(0.413)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK;AT(0.5)S(0.5)NVFAMFDQSQIQEFK 222.51 5.9559e-20 1211296000.0 1345395.0 1716679.0 1828079.0 1859205.0 1804752.0 1424117.0 1604145.0 1983708.0 2299011.0 1893638.0 True False 1270763.257371559 1634207.1640522883 1945919.8973698192 2035903.2842096344 1946775.7147657839 1415228.557553622 1766307.6315465015 1976826.9799489297 1881568.555751046 1876861.8405480706 0.6770680877610458 0.8707125525952812 1.0367944274478844 1.084737960048845 1.0372504106094977 0.7540398163459676 0.941096245545018 1.0532618529724425 1.002507757950687 1.0 20.83989102381251 -4.392730369596353 2.8683835265745805 0.9851360301796095 0.6620275673628243 0.5432521286631649 0.08767524388075582 0.26962480878361494 3.540571748108973 0.024950693022734168 0.1716189363015538 4.048271493932762e-05 4.392730369596353 -0.3231084628167852 AT(ph)SPLVSLYPALECR ddPTM_KYSE-520_SHP099_60min_R1 1 ATSPLVSLYPALECR 15 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 AT(0.511)S(0.489)PLVSLYPALECR 230.86 1.4998e-14 987200000.0 1090200.0 1155100.0 1073500.0 779890.0 794640.0 1197900.0 919070.0 1011600.0 1317800.0 1189200.0 True False 1029724.4327401806 1099607.2621595513 1142699.527660731 854010.5111175216 857173.6471168792 1190423.4617615563 1011978.5648588155 1008090.9957092155 1078520.7390346257 1178664.6131836001 0.873636504585364 0.9329263387228424 0.9694865824250661 0.7245576914461015 0.7272413522296505 1.0099764160613893 0.8585805949713194 0.8552823122315844 0.9150361578443561 1.0 20.168721829854633 -8.073070922964632 3.51320772582755 0.9999126035883799 0.869488263232471 0.17606526484209795 0.08682411144557137 0.6049858628680199 18.32688080914977 0.08812349688955416 0.023302456971429505 8.451408171877325e-09 8.073070922964632 -0.13042434035590889 AT(ph)TPASTANSDVATIPTDTPLKEENEGFVK ddPTM_KYSE-520_SHP099_60min_R1 1 ATTPASTANSDVATIPTDTPLKEENEGFVK 30 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 AT(0.496)T(0.4)PAS(0.088)T(0.016)ANSDVATIPTDTPLKEENEGFVK 200.68 2.7208000000000004e-15 572980000.0 185010.0 287120.0 189760.0 174110.0 201880.0 260840.0 216260.0 271250.0 280530.0 277250.0 True False 174747.12649170856 273326.324224094 201992.23322673497 190657.36205191986 217766.80745992612 259212.00080631478 238121.67129420777 270309.097060226 229592.82358581226 274793.78069723625 0.6359209660725269 0.9946597900817884 0.7350684310038554 0.6938197857613937 0.7924735665683001 0.9432964608901057 0.8665467998948883 0.9836798211894344 0.8355095337429571 1.0 18.06798982699606 -6.214862406263161 6.001278009039131 0.9210998020282395 0.7756827952544708 0.3831581945638748 0.09846871164245366 0.2475625497041012 22.625937517263672 0.03211165805371423 0.03177058537118137 6.097300420992168e-07 6.214862406263161 -0.14541700677376868 AT(ph)VTPS(ph)PVKGK ddPTM_KYSE-520_SHP099_60min_R1 2 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 AT(0.944)VT(0.056)PS(1)PVKGK;AT(0.5)VT(0.5)PS(1)PVKGK 181.77 4.0161e-06 30028100000.0 32905200.0 28025500.0 25632000.0 26596800.0 26786400.0 24672900.0 23912000.0 24945900.0 30531400.0 23869000.0 True False 31079882.961110048 26679112.912866876 27284279.732650056 29124551.875380483 28894337.286232207 24518907.279152453 26329258.318630785 24859368.495316815 24987667.393960964 23657539.229801003 1.3137411570667183 1.1277213852935155 1.1533016797571451 1.231089657824292 1.2213585278486825 1.0364098751347055 1.1129330934581845 1.0508011105399284 1.0562242822991674 1.0 24.495796681862494 -6.260593612060033 24.991067908876154 1.0583024522033837 1.2029861117213476 0.6857603031398711 0.053339401023074134 49.01341593679165 1448286.8741011426 0.018015661116375245 0.01702839081451813 5.487902512646101e-07 6.260593612060033 0.14468365951796391 ATAGDTHLGGEDFDNR ddPTM_KYSE-520_SHP099_60min_R1 2 ATAGDTHLGGEDFDNR 16 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066;P48741 A0A0G2JIW1;P17066 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ; 155.22 5.3519e-06 895760000.0 1144260.0 1236280.0 767660.0 749470.0 1041260.0 1114110.0 786550.0 1076860.0 1044050.0 892090.0 False True 1080785.6167742426 1176887.2531058872 817144.5918994277 820699.4034636276 1123201.2380410272 1107156.4262318795 866062.1499882507 1073124.6240010133 854476.8383587042 884186.7766355186 1.2223498986117118 1.3310391924024738 0.9241764449461709 0.9281968755363302 1.2703212349714155 1.252174829445876 0.9795013597508943 1.213685447869324 0.9663985720416836 1.0 19.753991632812692 -5.871249791207549 0.01931036522167413 9.72951311805507e-06 2.2520443776628163 0.1146469392955054 0.14438549975274567 2237.7259618214875 13.268561015750066 719.8762731548646 826.6165530010915 1.345086484170825e-06 5.871249791207549 2.2520346481496984 ATAPQT(ph)QHVSPMR ddPTM_KYSE-520_SHP099_60min_R1 4 ATAPQTQHVSPMR 13 0 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;A0A087X1X7;E9PK01;E9PQZ1;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PK06 P29692-2 EEF1D Elongation factor 1-delta 1 ATAPQT(0.941)QHVS(0.059)PMR;ATAPQT(0.665)QHVS(0.335)PMR;ATAPQT(0.692)QHVS(0.308)PMR;ATAPQT(0.5)QHVS(0.5)PMR 133.48 0.00022653 4814600000.0 5132700.0 5394890.0 4448630.0 4330190.0 4054940.0 5169470.0 4045500.0 4552830.0 5399170.0 4708820.0 True False 4847978.899216214 5135711.386505013 4735395.807859667 4741729.955680899 4374040.708547414 5137205.420212467 4454458.620275212 4537037.29536851 4418816.829999681 4667103.518206522 1.0387553822845565 1.1004065726141357 1.0146326922869258 1.0159898826291847 0.9372067046475699 1.1007266927275263 0.9544375013106577 0.9721312753551279 0.9468006897129522 1.0 22.154096036529147 -5.0201158171936955 2.6415737293564354 0.9892236506885752 1.069139380563021 0.30893647915244427 0.046409734610489244 0.3272034561140041 4.546581535587008 0.012948325668969599 0.0294485197108611 9.547379435627395e-06 5.0201158171936955 0.07991572987444573 ATAPQTQHVS(ph)PMR ddPTM_KYSE-520_SHP099_60min_R1 45 ATAPQTQHVSPMR 13 0 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;A0A087X1X7;E9PK01;E9PQZ1;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;E9PK06 P29692-2 EEF1D Elongation factor 1-delta 1 ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.303)QHVS(0.697)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.001)QHVS(0.999)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.003)QHVS(0.997)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.264)QHVS(0.736)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.001)QHVS(0.999)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.25)QHVS(0.75)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.102)QHVS(0.898)PMR;ATAPQT(0.009)QHVS(0.991)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.003)QHVS(0.997)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQTQHVS(1)PMR;ATAPQT(0.105)QHVS(0.895)PMR;ATAPQT(0.002)QHVS(0.998)PMR;AT(0.001)APQT(0.475)QHVS(0.524)PMR;ATAPQTQHVS(1)PMR 232.6 1.3139e-17 920187178000.0 79875832.0 80279395.0 68760190.0 61297303.0 59265389.0 73240591.0 61635311.0 71382720.0 81295823.0 67477062.0 True False 75444960.37043662 76422652.36237152 73192581.86759394 67122980.24741384 63929237.94036362 72783469.3043512 67866009.73854746 71135110.00517216 66534550.84412509 66879267.727039844 1.1280769502195611 1.1426957106390865 1.0943986732378885 1.0036440668185644 0.9558902199899013 1.0882814925756765 1.0147540791794385 1.0636347020948562 0.9948456839521378 1.0 25.995055715393015 -5.0805504998707365 3.6294273463049116 1.0205211469473467 1.133461141473907 0.6600000402471051 0.035025500868965075 0.1444671308931109 3.6014044679824773 0.009838685331981078 0.019048618095213733 8.307101179058221e-06 5.0805504998707365 0.11293999452656034 ATCAPQHGAPGPGPADASK ddPTM_KYSE-520_SHP099_60min_R1 4 ATCAPQHGAPGPGPADASK 19 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ;;; 159.74 2.3473e-08 2315440000.0 1249060.0 1881430.0 1429990.0 3439520.0 1676740.0 1533950.0 1596830.0 1434070.0 2880020.0 1370330.0 False True 1179772.151860621 1791043.2787159956 1522169.443464897 3766410.9466706016 1808689.898654432 1524376.04906014 1758253.159958985 1429095.5458844532 2357080.967396036 1358189.942300606 0.8686356120869462 1.3186986760350983 1.1207338502938182 2.773110615361182 1.3316914242427202 1.1223585167167673 1.2945561627269313 1.0522059554230991 1.735457533578427 1.0 20.373253823319807 -5.98396796422174 24.999123726298766 1.2452521912560122 1.5492353593662433 0.06277638924371964 0.5052818881470528 728.7736900209007 1136387.7856799501 0.16208949068446493 0.1837413343755407 1.0376049520338445e-06 5.98396796422174 0.3039831681102312 ATDDDMQSLASLMSVKPSDVGNLDDFAES(ph)DEDEAHGPGAPEAR ddPTM_KYSE-520_SHP099_60min_R1 11 ATDDDMQSLASLMSVKPSDVGNLDDFAESDEDEAHGPGAPEAR 43 1 Q8N3D4;E9PIH6;A0A0U1RQH4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 ATDDDMQSLASLMSVKPS(0.001)DVGNLDDFAES(0.999)DEDEAHGPGAPEAR;ATDDDMQSLASLMSVKPS(0.002)DVGNLDDFAES(0.998)DEDEAHGPGAPEAR;ATDDDMQSLASLMSVKPSDVGNLDDFAES(1)DEDEAHGPGAPEAR;ATDDDMQSLASLMSVKPSDVGNLDDFAES(1)DEDEAHGPGAPEAR;ATDDDMQSLASLMSVKPSDVGNLDDFAES(1)DEDEAHGPGAPEAR;ATDDDMQSLASLMSVKPSDVGNLDDFAES(1)DEDEAHGPGAPEAR;ATDDDMQSLASLMSVKPSDVGNLDDFAES(1)DEDEAHGPGAPEAR;ATDDDMQSLASLMSVKPSDVGNLDDFAES(1)DEDEAHGPGAPEAR;ATDDDMQSLASLMSVKPSDVGNLDDFAES(1)DEDEAHGPGAPEAR;ATDDDMQSLASLMSVKPS(0.002)DVGNLDDFAES(0.997)DEDEAHGPGAPEAR;ATDDDMQSLASLMSVKPSDVGNLDDFAES(1)DEDEAHGPGAPEAR 383.93 3.0527999999999996e-115 10830110000.0 3838274.0 3678426.0 3211869.0 3219646.0 3401353.0 3391330.0 3119064.0 3332019.0 4012313.0 3336101.0 True False 3625357.2898104754 3501708.893530004 3418911.214912105 3525640.1878181337 3669020.1300487476 3370163.4515200076 3434369.4282511664 3320461.003788083 3283778.101379748 3306545.740587307 1.096418309086068 1.0590232733051599 1.0339827370132915 1.066260824564281 1.1096232799722463 1.0192399307082929 1.0386577708860472 1.0042083988223627 0.9931143734296217 1.0 21.65689342833459 -6.838238283370326 1.4030598259532285 0.9981474269149267 1.0685157017676365 0.6359529142122504 0.023045067351384882 0.29712186095992615 1.1698171967564126 0.015216929597958055 0.008321428644943209 1.4513151093226649e-07 6.838238283370326 0.0703682748527098 ATDEDMQS(ph)LAS(ph)LMSMK ddPTM_KYSE-520_SHP099_60min_R1 4 ATDEDMQSLASLMSMK 16 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86;C9K0H9 Q8NDI1-3 EHBP1 EH domain-binding protein 1 2 ATDEDMQS(1)LAS(1)LMSMK;ATDEDMQS(1)LAS(1)LMSMK;ATDEDMQS(1)LAS(1)LMSMK;ATDEDMQS(1)LAS(0.99)LMS(0.01)MK 184.61 5.1806e-12 266215000.0 1416300.0 1266630.0 1125570.0 1230630.0 1149270.0 1167360.0 1139440.0 1244460.0 1314040.0 1448500.0 True False 1337735.0156759454 1205779.1935496104 1198126.0431756745 1347588.7051975974 1239711.0105481935 1160074.073229795 1254625.7150627568 1240143.2587191463 1075443.4602527372 1435667.4169159457 0.9317861504091418 0.8398736220815168 0.8345428955610417 0.9386496408008227 0.8635084950324362 0.8080381706522453 0.8738971855737335 0.8638095732388925 0.7490895506725158 1.0 20.453290146104752 -5.995032319324267 24.975155773661275 0.8496531551310421 0.8819457195242206 0.025887190165697183 0.0670475120825152 482.98755764520456 2428209.39631062 0.019928090716118643 0.02251625658198048 1.0115041773468788e-06 5.995032319324267 0.03229256439317851 ATDEDMQS(ph)LASLMSMK ddPTM_KYSE-520_SHP099_60min_R1 9 ATDEDMQSLASLMSMK 16 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86;C9K0H9 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 ATDEDMQS(0.989)LAS(0.01)LMS(0.001)MK;ATDEDMQS(1)LASLMSMK;ATDEDMQS(0.965)LAS(0.035)LMSMK;ATDEDMQS(0.942)LAS(0.058)LMSMK;ATDEDMQS(0.988)LAS(0.011)LMSMK;ATDEDMQS(0.988)LAS(0.012)LMSMK;ATDEDMQS(0.914)LAS(0.086)LMSMK;ATDEDMQS(0.998)LAS(0.002)LMSMK;ATDEDMQS(1)LASLMSMK 338.41 1.3498000000000002e-58 1585715000.0 1885248.0 2201090.0 1539670.0 1406510.0 1344148.0 1908180.0 1434625.0 1811846.0 1965730.0 2174190.0 True False 1780669.5352912862 2095346.3324965513 1638919.5917590999 1540184.287517347 1449924.8004440484 1896270.340816567 1579650.8955907377 1805561.1291140367 1608802.9840207407 2154928.3680942217 0.8263242350213603 0.9723508045650893 0.7605448125445254 0.7147264430322837 0.6728412980735572 0.8799690833777426 0.7330410230701782 0.8378752425589168 0.7465691239860265 1.0 21.039208482855333 -9.823659386914457 14.02779180057041 1.000009840638275 0.7942374972326862 0.35271201550886877 0.08379713058183555 0.0 0.0 0.08465233955671922 0.020531208085176795 1.50086148559919e-10 9.823659386914457 -0.2057723434055887 ATDEDMQSLAS(ph)LMSMK ddPTM_KYSE-520_SHP099_60min_R1 2 ATDEDMQSLASLMSMK 16 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86;C9K0H9 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 ATDEDMQS(0.007)LAS(0.993)LMS(0.001)MK;ATDEDMQS(0.001)LAS(0.992)LMS(0.007)MK 120.24 0.00014368 124644000.0 201249.0 241544.0 154255.0 164493.0 138984.0 203843.0 165846.0 218431.0 210051.0 266423.0 True False 190085.31679006488 229939.86367506426 164198.5241167265 180126.36526337598 149921.25008921328 202570.74022527825 182611.33218098184 217673.31384317848 171911.03335480497 264062.69949395774 0.7198491765567003 0.8707775241096697 0.6218164262934216 0.6821348324036868 0.5677486838410655 0.7671312177504777 0.6915453508993622 0.824324352740169 0.6510235398041844 1.0 18.010521000645944 -11.502981425482366 0.4813638342620589 1.5093559729667612 0.7082254441677005 0.49866790867339117 0.08677709154374322 110.39839996568864 5.770156722451567 59.008316592077485 0.04409339422942587 3.1406430144444176e-12 11.502981425482366 -0.8011305287990607 ATDIPASAS(ph)PPPVAGVPFFK ddPTM_KYSE-520_SHP099_60min_R1 5 ATDIPASASPPPVAGVPFFK 20 0 Q8N1G0;F8WCX2;Q8N1G0-2 Q8N1G0 ZNF687 Zinc finger protein 687 1 ATDIPAS(0.014)AS(0.986)PPPVAGVPFFK;ATDIPASAS(1)PPPVAGVPFFK;ATDIPAS(0.001)AS(0.999)PPPVAGVPFFK;ATDIPAS(0.001)AS(0.999)PPPVAGVPFFK;ATDIPAS(0.005)AS(0.995)PPPVAGVPFFK 205.78 2.0063e-16 2800570000.0 3249400.0 4290380.0 2935360.0 2422070.0 2654040.0 4122990.0 2924350.0 3622990.0 4323540.0 3991790.0 True False 3069149.304481692 4084263.704808328 3124578.002342059 2652262.804578102 2862897.8485780787 4097256.8900645184 3219971.8369056536 3610422.6933022216 3538494.123573958 3956425.846165631 0.7757378562917229 1.0323114506914344 0.7897476469501489 0.6703683849271539 0.723607103960423 1.0355955221643731 0.8138587609385598 0.912546534089919 0.8943663450695755 1.0 21.915766286899153 -6.249825596691213 24.99547230877451 0.9184691785988396 0.8037636053959165 0.283178221832209 0.10457561395084986 1260.8042325520498 2713536.26171788 0.03689160434509532 0.036597958596223036 5.625671947022703e-07 6.249825596691213 -0.11470557320292307 ATDS(ph)LPGKFEDMYK ddPTM_KYSE-520_SHP099_60min_R1 3 ATDSLPGKFEDMYK 14 1 A0A499FJN1;A0A499FIS5;Q9BUB5-2;Q9BUB5;A0A499FJS1;Q9BUB5-3;E9PN34;E9PSE0;E9PLE7;E9PMM8;E9PII5;E9PIA0 A0A499FJN1 MKNK1 MAP kinase-interacting serine/threonine-protein kinase 1 1 AT(0.002)DS(0.998)LPGKFEDMYK;ATDS(1)LPGKFEDMYK;ATDS(1)LPGKFEDMYK 213.69 5.7445e-14 1279889000.0 2136900.0 2005850.0 1985220.0 1954430.0 2049450.0 1962610.0 1879390.0 2146640.0 2461400.0 2029640.0 True False 2018361.8971954582 1909485.9551577661 2113190.4576643077 2140178.4395791925 2210730.055224613 1950360.6229967838 2069377.0822788363 2139193.8068695427 2014471.806844608 2011658.9686360236 1.0033320402036034 0.9492095752454829 1.0504715215706397 1.0638873054264808 1.0989586653067576 0.9695284605417974 1.0286917984323891 1.0633978423887585 1.0013982679233606 1.0 20.939954318821815 -4.7696372739587485 24.99951816015347 1.0376237776808508 0.9762708041081452 0.2740456015271566 0.03767004452061099 197.86737805810364 603403.3753680886 0.009932470949757684 0.02126219537895928 1.69966263091349e-05 4.7696372739587485 -0.06135297357270564 ATDSDLSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 ATDSDLSSPR 10 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 1 ATDSDLS(0.03)S(0.97)PR;ATDSDLSS(1)PR 150.46 0.00010988 1413400000.0 3511200.0 4462200.0 3864900.0 3144300.0 4254100.0 3580900.0 3784500.0 3939000.0 5326300.0 3459900.0 True False 3316426.736596333 4247829.214101248 4114037.6380586405 3443133.326631735 4588873.4674820285 3558550.274832586 4167074.19316068 3925336.5283695096 4359178.185096462 3429247.977761471 0.9671002966548995 1.238705757544582 1.1996909132083773 1.004049094425457 1.3381573736401333 1.0377057296263306 1.2151568566006252 1.1446639478466276 1.271176133474613 1.0 21.709460802367413 -4.247382533834858 24.06211526572134 1.165229414954779 0.9671000672624598 0.2189652128105365 0.10962344373439771 2069.8132744708146 3542948.19185841 0.02499459538384175 0.48166881451264526 5.657407556035596e-05 4.247382533834858 -0.19812934769231927 ATEKENGDKSEAQKPSEK ddPTM_KYSE-520_SHP099_60min_R1 1 ATEKENGDKSEAQKPSEK 18 3 A0A494C039;Q9Y4L1 A0A494C039 HYOU1 Hypoxia up-regulated protein 1 0 70.094 0.0080395 639150000.0 1263400.0 1113800.0 836110.0 707880.0 1144100.0 1069000.0 672240.0 1050600.0 1036400.0 809690.0 False True 1193316.6834745393 1060291.376152115 890006.988423301 775156.7023681167 1234134.160961469 1062327.9744745847 740196.5796301592 1046955.7138118823 848215.8855178972 802516.7765292887 1.4869678969645663 1.321207739404085 1.1090197918009745 0.9659071623655041 1.5378297339761942 1.3237455035755428 0.9223440571938559 1.3045904390182832 1.0569447397551577 1.0 19.614172026375954 -1.0000000000000406 0.10804886791846081 0.9276415888124069 2.2165775711343696 0.22794630246886816 0.1838860746554521 206.28191940313863 1.5639742897671336 1.9085012022218402 39.58965268877785 0.09999999999999064 1.0000000000000406 1.2889359823219628 ATENDIANFFS(ph)PLNPIR ddPTM_KYSE-520_SHP099_60min_R1 5 ATENDIANFFSPLNPIR 17 0 P31942-4;P31942-3;P31942;P31942-5;P31942-2;P31942-6 P31942-4 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 1 ATENDIANFFS(1)PLNPIR;ATENDIANFFS(1)PLNPIR;ATENDIANFFS(1)PLNPIR;ATENDIANFFS(1)PLNPIR;ATENDIANFFS(1)PLNPIR 212.55 3.6433e-14 1098835000.0 718934.0 814821.0 648281.0 504162.0 599698.0 757938.0 553313.0 711008.0 882225.0 720221.0 True False 679053.297860603 775675.776088745 690070.2305462746 552077.4048981669 646890.820785133 753207.4277991736 609247.2778544899 708541.6791985143 722035.1790824265 713840.4022634587 0.9512676723080508 1.0866235276529845 0.9667009997727598 0.773390526996832 0.9062121151085863 1.0551482171797635 0.8534782787898766 0.9925771600372533 1.0114798445044348 1.0 19.445242032444078 -7.497667124501266 24.435933980679273 1.0045028428970897 0.9433069571905579 0.09470689694897128 0.08487904758346668 1457.0279637878612 1412208.4287124535 0.04978576486299422 0.02373545862320526 3.1793099959559826e-08 7.497667124501266 -0.06119588570653178 ATENDIYNFFS(ph)PLNPMR ddPTM_KYSE-520_SHP099_60min_R1 4 ATENDIYNFFSPLNPMR 17 0 P55795 P55795 HNRNPH2 Heterogeneous nuclear ribonucleoprotein H2 1 ATENDIYNFFS(1)PLNPMR;ATENDIYNFFS(1)PLNPMR;ATENDIYNFFS(1)PLNPMR;ATENDIYNFFS(1)PLNPMR 253.48 5.6607000000000004e-24 321369000.0 252018.0 307353.0 272659.0 191504.0 224698.0 289308.0 200638.0 241904.0 311792.0 269436.0 True False 238038.0591545723 292587.3005337418 290235.0354098247 209704.48258222273 242380.4542432654 287502.32145864604 220920.4470781801 241064.89148481807 255178.4324367004 267049.0066580364 0.8913647054279689 1.0956314880002829 1.0868231229988383 0.7852659150713678 0.9076253728726289 1.0765901175090336 0.8272655638860879 0.9026990757299777 0.9555490792873962 1.0 18.02674499228532 -5.230456527607009 24.996286774332138 0.9199651845692246 1.0317089399896842 0.20229844620279924 0.09284979781853794 1030.2540609415537 831185.3610978596 0.025114004975032793 0.04349335982374458 5.8822499186145286e-06 5.230456527607009 0.11174375542045956 ATENDIYNFFS(ph)PLNPVR ddPTM_KYSE-520_SHP099_60min_R1 1 ATENDIYNFFSPLNPVR 17 0 P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;H0YBG7;P52597 P31943;P52597 HNRNPH1;HNRNPF Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed 1 ATENDIYNFFS(1)PLNPVR 114.9 0.00013683 155320000.0 233450.0 237030.0 200910.0 176260.0 188040.0 198670.0 188240.0 220680.0 239820.0 217020.0 True False 220500.06312896262 225642.72301071676 213860.9800673657 193011.6974054985 202837.67819875403 197430.0268371051 207269.1362453605 219914.51258709934 196274.73337022608 215097.37163900502 1.0251174221646224 1.0490259424899429 0.9942519447717179 0.8973224355778154 0.9430039830480762 0.9178635021558944 0.9636060853092034 1.0223951641593225 0.9124924766613666 1.0 17.714630370436556 -4.998970535540364 5.862072428876427 0.9502177894970957 1.034373563060904 0.4710643554514098 0.03674782744044812 0.12975159108225007 17.515564353585486 0.009960944521323347 0.019725230713543884 1.0023732412077744e-05 4.998970535540364 0.08415577356380843 ATEVS(ph)KTPEAR ddPTM_KYSE-520_SHP099_60min_R1 2 ATEVSKTPEAR 11 1 Q5H909;Q9UNF1-2;Q9UNF1 Q5H909 MAGED2 Melanoma-associated antigen D2 1 ATEVS(0.5)KT(0.5)PEAR;AT(0.003)EVS(0.499)KT(0.499)PEAR 222.55 9.6616e-10 3822000000.0 2835780.0 3032450.0 2514430.0 2104440.0 2216380.0 2439100.0 2307850.0 2838190.0 3345900.0 2706590.0 True False 2678473.6304127183 2886766.5501997485 2676514.1810302427 2304445.344877041 2390796.496522838 2423876.672161792 2541150.00044547 2828344.981328527 2738368.9032751145 2682611.718295156 0.9984574406149737 1.07610301204318 0.9977270146017299 0.8590305220695725 0.8912197319566726 0.9035510639244525 0.9472671662153228 1.054325142188668 1.0207846646608227 1.0 21.35520682309227 -9.585109687713947 10.364364980247872 0.9999999965652066 0.969841791994876 0.014129070344265915 0.06781234462224822 0.0 0.0 0.07487597262914789 0.018160090957116966 2.599502936022208e-10 9.585109687713947 -0.030158204570330582 ATEVSKT(ph)PEAR ddPTM_KYSE-520_SHP099_60min_R1 3 ATEVSKTPEAR 11 1 Q5H909;Q9UNF1-2;Q9UNF1 Q5H909 MAGED2 Melanoma-associated antigen D2 1 ATEVS(0.195)KT(0.805)PEAR;ATEVS(0.073)KT(0.927)PEAR;ATEVS(0.005)KT(0.995)PEAR 211.77 4.2004e-09 3824830000.0 4173900.0 4120600.0 3485850.0 3133010.0 3334650.0 3901800.0 3134700.0 3813400.0 4738600.0 3853700.0 True False 3942365.4465366304 3922640.190853305 3710553.468557203 3430770.328426197 3597067.983436904 3877447.4189007743 3451586.067723818 3800172.2054542503 3878189.6903850925 3819559.2161332294 1.0321519378164596 1.02698766242049 0.9714611709341741 0.8982110589973712 0.9417495003725673 1.0151557285780606 0.9036608342514629 0.9949242806350295 1.0153500629088867 1.0 21.86497472764011 -10.143375160036687 13.660802930168229 1.0000124036438318 0.9750325572627253 0.01720585756121118 0.04659290681518679 0.0 0.0 0.04761430157865792 0.011548164394048255 7.188277590585226e-11 10.143375160036687 -0.024979846381106507 ATFMVGS(ph)YGPRPEEYEFLTPVEEAPK ddPTM_KYSE-520_SHP099_60min_R1 4 ATFMVGSYGPRPEEYEFLTPVEEAPK 26 1 P52566;H0YGX7 P52566 ARHGDIB Rho GDP-dissociation inhibitor 2 1 AT(0.001)FMVGS(0.999)YGPRPEEYEFLTPVEEAPK;ATFMVGS(1)YGPRPEEYEFLTPVEEAPK;ATFMVGS(1)YGPRPEEYEFLTPVEEAPK;ATFMVGS(1)YGPRPEEYEFLTPVEEAPK 182.73 6.3108e-12 748465000.0 574798.0 549832.0 481787.0 450846.0 491601.0 514412.0 432993.0 468896.0 607223.0 520227.0 True False 542912.8091085948 523417.24540534266 512843.76090645493 493694.26828820765 530287.2018729296 511201.3638965568 476764.15804445086 467269.50921714865 496966.61004615383 515618.19351048116 1.0529357108450417 1.0151256336433034 0.9946192111935829 0.957480311016551 1.028449361459838 0.9914339143391095 0.9246457243847419 0.9062316169176259 0.9638267545655403 1.0 18.975943644312228 -6.644107989327379 5.1657375830788705 0.9411866628729486 1.0065517516569074 0.4275228154704036 0.03280553821825844 0.19228731079317302 7.911702081242099 0.012953551546739979 0.009892293001079917 2.2693005096780635e-07 6.644107989327379 0.06536508878395875 ATFS(ph)GSAGR ddPTM_KYSE-520_SHP099_60min_R1 1 ATFSGSAGR 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 AT(0.093)FS(0.453)GS(0.453)AGR 68.626 0.031876999999999996 609070000.0 2029800.0 1980300.0 1802200.0 1691300.0 1951900.0 1867800.0 1752600.0 1809100.0 2115800.0 1944000.0 True False 1917202.9476940185 1885163.4155090991 1918372.6956219524 1852040.643492115 2105503.4252081895 1856142.3673747708 1929769.9117276834 1802824.654347116 1731624.0549775811 1926777.6724091133 0.995030706006094 0.9784021490927999 0.99563780663046 0.9612113893641127 1.0927588872127678 0.9633401891428268 1.001552975914875 0.9356682300002912 0.8987150306825358 1.0 20.87775868044013 -7.262050480812437 24.757406363604407 0.9378937185163448 0.9982751061354957 0.25269074034451966 0.04164327742553464 59.943789189674554 2428309.635245417 0.02057153527031005 0.010807126471082338 5.4695238344138506e-08 7.262050480812437 0.060381387619150906 ATFSGS(ph)AGR ddPTM_KYSE-520_SHP099_60min_R1 4 ATFSGSAGR 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 AT(0.007)FS(0.197)GS(0.796)AGR;ATFS(0.002)GS(0.998)AGR;ATFS(0.014)GS(0.986)AGR;ATFSGS(1)AGR 115.57 0.0008471 2570610000.0 2171880.0 2119970.0 2060230.0 1754190.0 2039100.0 2018440.0 1893060.0 1946880.0 2527400.0 2084100.0 True False 2051401.4868645603 2018123.4590601563 2193035.7222845503 1920907.690183543 2199565.569108059 2005842.1672576983 2084428.9792851785 1940126.7276852082 2068487.8705692138 2065636.4954052656 0.9931086575143453 0.9769983554943981 1.0616755305992451 0.9299350076629394 1.064836709653756 0.9710528312795732 1.0090976722776317 0.9392391797882942 1.001380385740807 1.0 20.978154964661247 ATGAALT(ph)PTEER ddPTM_KYSE-520_SHP099_60min_R1 1 ATGAALTPTEER 12 0 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 ATGAALT(0.964)PT(0.036)EER 140.07 0.0011267999999999999 228880000.0 657700.0 639600.0 590840.0 526790.0 578760.0 793350.0 596110.0 748300.0 854680.0 690360.0 True False 621216.0699075547 608872.6559408277 628926.4917774253 576855.9632148118 624305.1193060565 788398.408371759 656370.616272959 745704.3219545326 699491.6567294827 684243.9474919522 0.9078868321518637 0.8898473390559132 0.9191553598430952 0.8430559968111322 0.9124013761384412 1.1522183152099155 0.9592640441743607 1.0898223136468492 1.022284025008069 1.0 19.38415124266502 -6.105393584859644 7.631604616756606 1.0446570136471391 0.8903348979504483 0.6795319628920067 0.05176267977828382 0.1528891103920409 9.850395481843535 0.015850252777873126 0.01587741424122262 7.845243272624927e-07 6.105393584859644 -0.15432211569669085 ATGDWK ddPTM_KYSE-520_SHP099_60min_R1 2 ATGDWK 6 0 P30050 P30050 RPL12 60S ribosomal protein L12 0 ; 128.75 0.056076999999999995 2169910000.0 2992200.0 3021500.0 2093500.0 1713290.0 2858600.0 2911000.0 2272000.0 2354800.0 2456600.0 2662300.0 False True 2826216.701197184 2876342.604636037 2228450.3597184336 1876120.566480576 3083555.5567908864 2892831.369219376 2501675.9325831886 2346631.748414454 2010543.3658464537 2638714.093238055 1.0710583266446418 1.0900546641286097 0.8445213391738956 0.7109980468472525 1.1685826686160423 1.0963034519853894 0.9480663096445201 0.8893088320663127 0.7619405872726621 1.0 21.331403611305948 -7.195779367581265 3.666206702145204 0.8674086640589106 0.9906171571492615 0.11437834163687899 0.13721672393758041 0.5434433257751138 14.423537238829068 0.07845693878997802 0.04101185565386915 6.371191110894475e-08 7.195779367581265 0.12320849309035087 ATGEPGTFVCTSHLPAAASAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 ATGEPGTFVCTSHLPAAASASPK 23 0 Q8IY33-4;Q8IY33-2;Q8IY33 Q8IY33-4 MICALL2 MICAL-like protein 2 1 ATGEPGTFVCTSHLPAAAS(0.111)AS(0.889)PK 92.92399999999999 0.0019352 346500000.0 400640.0 463240.0 301370.0 288000.0 316020.0 285000.0 262210.0 293670.0 410930.0 327440.0 True False 378415.70054396027 440985.2550625837 320796.79240904935 315371.43340964295 340888.97609216237 283221.2092846176 288716.7457229916 292651.3273130932 336315.4707023058 324539.13634446485 1.1660094520690134 1.3588045498294643 0.9884687437775043 0.9717516258960789 1.0503786382494833 0.8726873820974476 0.889620737193768 0.9017443338558526 1.0362863304884795 1.0 18.30803293850271 -4.828287925236248 6.808726528778257 0.9562577179748241 1.2611942516782562 0.7362035248525618 0.07145915012851604 0.09074528614106286 7.343580863582591 0.018828218799451082 0.04010671102423111 1.4849508345183007e-05 4.828287925236248 0.3049365337034321 ATGGLCLLGAYADS(ph)DDDDNDVSEK ddPTM_KYSE-520_SHP099_60min_R1 1 ATGGLCLLGAYADSDDDDNDVSEK 24 0 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 ATGGLCLLGAYADS(0.996)DDDDNDVS(0.004)EK 142.23 5.9036e-08 79873000.0 293050.0 299180.0 249500.0 202710.0 249440.0 266370.0 242230.0 245250.0 302210.0 289900.0 True False 276793.9323193084 284806.94372166443 265583.1692141149 221975.49745301635 269069.50888054294 264707.4860250653 266716.9723369827 244399.28499178035 247336.28209413704 287331.71153878694 0.9633253873613736 0.9912130554486963 0.9243085902067715 0.772540894509139 0.9364420914056373 0.9212609516973987 0.9282545630226359 0.8505823589151206 0.8608039842506179 1.0 18.132357700008384 -4.974335387488851 7.85859154714435 0.8901801033013669 0.9730454459077277 0.2342883369462373 0.05772100545399194 0.2634243986703874 63.58991594320017 0.015002041919514231 0.03096384171642463 1.0608759705715753e-05 4.974335387488851 0.0828653426063608 ATGNDLRPPPPS(ph)PSSDLTHPMK ddPTM_KYSE-520_SHP099_60min_R1 1 ATGNDLRPPPPSPSSDLTHPMK 22 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 ATGNDLRPPPPS(0.962)PS(0.03)S(0.009)DLTHPMK 149.94 3.4021e-07 1112800000.0 358890.0 408070.0 332940.0 415950.0 341340.0 466590.0 444090.0 482120.0 566070.0 505070.0 True False 338981.6562705221 388465.704674442 354401.8451228352 455481.7629400724 368201.5160410698 463677.8387372277 488982.95110073424 480447.63824765367 463285.95746344654 500595.4727385145 0.6771568556465728 0.776007227051685 0.7079605478333133 0.9098799085184552 0.7355270594574463 0.9262525611761362 0.9768025835826005 0.9597522638775741 0.9254697309367068 1.0 18.93328571814538 -5.760980321074956 0.505382106422464 0.9917174422342091 0.6701609039903323 0.737207031305843 0.05921975278559442 0.6573682297534186 0.32742480232739113 0.04795916353696002 0.10531744006514787 1.7338825623534185e-06 5.760980321074956 -0.32155653824387675 ATGNDLRPPPPSPSS(ph)DLTHPMK ddPTM_KYSE-520_SHP099_60min_R1 1 ATGNDLRPPPPSPSSDLTHPMK 22 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 ATGNDLRPPPPS(0.053)PS(0.372)S(0.575)DLTHPMK 159.56 1.4512e-09 653280000.0 289290.0 283280.0 224500.0 227310.0 214470.0 336310.0 251820.0 342060.0 379550.0 293660.0 True False 273242.5070146821 269670.80358805147 238971.62921270024 248913.47405675615 231347.5688326248 334210.96454213996 277276.4231263639 340873.47369740444 310633.2876768792 291058.400864023 0.9387892814759737 0.9265178492959445 0.8210435723665755 0.8552011325488036 0.7948493090934902 1.148260842325857 0.9526487546940869 1.1711514688650202 1.0672541550243768 1.0 18.15094913335559 -6.260686650596479 24.999999753331537 1.0713591197723982 0.8673314419280228 0.662427660865182 0.07157244972626443 41.94459343694318 1393101.4571048513 0.02407034872388886 0.022748976281396473 5.486726969893739e-07 6.260686650596479 -0.20402767784437537 ATGPEAAGGGGAGGGGGGYRPIIQS(ph)PGYK ddPTM_KYSE-520_SHP099_60min_R1 1 ATGPEAAGGGGAGGGGGGYRPIIQSPGYK 29 1 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 ATGPEAAGGGGAGGGGGGYRPIIQS(1)PGYK 68.741 0.016975 1183700000.0 171970.0 196330.0 152090.0 179600.0 151710.0 180870.0 141230.0 185080.0 219340.0 194050.0 True False 162430.48128630413 186898.0121026622 161893.964752604 196669.130001291 163648.71388817806 179741.12323968014 155506.9066719733 184438.00067799696 179513.38511143922 192330.86796861546 0.8445367246655878 0.9717525536938783 0.8417471748685803 1.022556244239398 0.8508707708576568 0.9345412160725561 0.8085384749438603 0.958962035714899 0.9333571205051298 1.0 17.553230799732436 -7.967217738761804 1.7044712784999578 0.9966930158310429 0.9027162673464287 0.1798589454780103 0.06430190920163516 0.6101772097457848 4.01510829983494 0.056851309364888074 0.01643561138476541 1.0784059148955002e-08 7.967217738761804 -0.09397674848461413 ATGPPSQNSNIGTGRGS(ph)EGDCS(ph)PEDKNSVTAK ddPTM_KYSE-520_SHP099_60min_R1 1 ATGPPSQNSNIGTGRGSEGDCSPEDKNSVTAK 32 2 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 2 ATGPPS(0.02)QNS(0.022)NIGT(0.147)GRGS(0.812)EGDCS(0.999)PEDKNSVTAK 121.44 9.784700000000001e-05 459370000.0 257480.0 227620.0 198270.0 190880.0 161320.0 209740.0 171430.0 203240.0 242040.0 182650.0 True False 243197.071126345 216684.79353541436 211050.80144321657 209021.17780983547 174014.96621475773 208430.93486089722 188759.81739557025 202535.00787657258 198091.6373318715 181031.8630995497 1.3433937372263056 1.1969428465543608 1.1658212970340995 1.1546098804435019 0.961239437275562 1.151349443640652 1.0426883652618155 1.1187809947312881 1.094236307024806 1.0 17.465884120309006 -3.784980376221857 0.7095232463650476 1.070609044883923 1.716663602390703 0.6877440942683961 0.05760451834027906 3.028299853718045 0.7222699021293194 0.022775252532364235 1.8252552927575483 0.00016406639056107218 3.784980376221857 0.64605455750678 ATGPVLISTADFEGPMPSAPPEAES(ph)PLASTSK ddPTM_KYSE-520_SHP099_60min_R1 1 ATGPVLISTADFEGPMPSAPPEAESPLASTSK 32 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 ATGPVLISTADFEGPMPS(0.049)APPEAES(0.913)PLAS(0.013)T(0.013)S(0.013)K 52.92 0.051329999999999994 29617000.0 32443.0 34891.0 18466.0 16896.0 27407.0 38296.0 28480.0 39322.0 40090.0 37790.0 True False 30643.32211648291 33214.7839875413 19656.34790664466 18501.790760032378 29563.77497550124 38056.98045882009 31359.036338014597 39185.60115982379 32810.66658665813 37455.210000175124 0.8181324338146718 0.8867867510924649 0.5247960939627025 0.49397108599700473 0.7893100846414428 1.0160664019409358 0.8372409696239316 1.0461989442761255 0.8759974002683398 1.0 15.192878790319588 -6.039448775253271 5.8365284469828165 0.947248987721858 0.6791323540213445 0.5199342071490993 0.12462065923419494 0.1777174731717665 16.43950331381107 0.04417577075392117 0.04539906383996431 9.131691366367413e-07 6.039448775253271 -0.2681166337005134 ATIS(ph)DEEIER ddPTM_KYSE-520_SHP099_60min_R1 2 ATISDEEIER 10 0 C9J0A7;Q9UQN3-2;Q9UQN3 C9J0A7 CHMP2B Charged multivesicular body protein 2b 1 AT(0.001)IS(0.999)DEEIER;AT(0.076)IS(0.924)DEEIER 186.76 2.4045999999999997e-07 1833010000.0 3459480.0 3179650.0 3242970.0 2734560.0 2864530.0 2917960.0 2680120.0 2840100.0 3672430.0 2857770.0 True False 3267575.7480975986 3026894.8412480503 3452017.0351354624 2994451.7602245556 3089952.214053803 2899747.929277693 2951052.6850505504 2830248.355984321 3005609.286426562 2832452.3811114198 1.153620717470082 1.0686480949982762 1.2187378888187814 1.0571940344676047 1.0909105602832212 1.0237587571162863 1.0418719498093003 0.9992218668381517 1.0611332096771906 1.0 21.433620271138054 -5.830734126153597 1.4046349464471883 1.025191864244896 1.1369457789001063 0.5615320724968473 0.04322563019550788 0.30269320437358566 1.2468383813485295 0.016079263705653747 0.02100443319702759 1.4766102332107282e-06 5.830734126153597 0.11175391465521023 ATKPMAES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 ATKPMAESPK 10 1 Q9Y6X8 Q9Y6X8 ZHX2 Zinc fingers and homeoboxes protein 2 1 ATKPMAES(1)PK 107.65 0.0017366 0.0 130970.0 127980.0 107510.0 131680.0 120570.0 108860.0 114850.0 116870.0 144260.0 127810.0 True False 123704.83301777772 121831.64869810361 114440.26662208194 144194.82760896435 130058.17305054126 108180.5643604334 126460.15882798383 116464.60524766307 118066.02049866067 126677.70283467523 0.9765320198395344 0.9617450109361699 0.9033970782643245 1.138281042222169 1.026685597703629 0.8539826815585525 0.9982826969401607 0.9193773066729739 0.9320189572173289 1.0 16.950803085413572 ATLDMPDEEFSLQMPPRS(ph)PKTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 ATLDMPDEEFSLQMPPRSPKTSPK 24 2 A0A3B3ITA3 A0A3B3ITA3 2 AT(0.034)LDMPDEEFS(0.049)LQMPPRS(0.56)PKT(0.399)S(0.958)PK 45.125 0.063251 1158900000.0 569420.0 534610.0 612600.0 525030.0 519620.0 520630.0 504630.0 542710.0 750540.0 554530.0 True False 537833.1374893719 508926.5331340298 652089.1761946554 574928.6933439751 560511.137766627 517380.5550521073 555642.9251141958 540827.4656794665 614260.8555737195 549617.2956178121 0.9785593389756888 0.9259652801900226 1.1864422415267282 1.046052767858608 1.0198207775404329 0.9413469320875935 1.0109633185571616 0.9840073629261155 1.1176155853742613 1.0 19.068067878719166 -7.7347597922688065 24.996614122923212 1.0588081083915126 1.0136688532133744 0.06249610349691481 0.07272971501484639 631.5550163003805 591719.6032419913 0.050786409078745515 0.01918330342587579 1.841790411760324e-08 7.7347597922688065 -0.045139255178138216 ATLLNVPDLS(ph)DS(ph)IHSANASER ddPTM_KYSE-520_SHP099_60min_R1 1 ATLLNVPDLSDSIHSANASER 21 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 AT(0.001)LLNVPDLS(0.996)DS(0.962)IHS(0.037)ANAS(0.004)ER 47.085 0.06363200000000001 129600000.0 265940.0 243390.0 268220.0 206580.0 315150.0 295600.0 203570.0 218210.0 301630.0 259020.0 True False 251187.77806175337 231697.17906416202 285509.890367174 226213.30108945825 339950.51204178575 293755.0507527475 224148.8422517425 217453.0804405971 246861.59547352692 256725.28431451088 0.9784302264284434 0.9025101663937112 1.1121222092694207 0.8811492864579993 1.3241800976070464 1.1442388759529893 0.8731077768605783 0.8470263496687693 0.9615788181233443 1.0 17.969865865242237 -6.7743474171527 24.993520398233294 0.9076804051740618 1.0567206571543248 0.2171303007104286 0.12621452405754519 363.6571071157793 704133.9740972834 0.05514468021828643 0.03744201767213769 1.6813285314946175e-07 6.7743474171527 0.14904025198026305 ATLLNVPDLSDS(ph)IHS(ph)ANASER ddPTM_KYSE-520_SHP099_60min_R1 9 ATLLNVPDLSDSIHSANASER 21 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 ATLLNVPDLS(0.018)DS(0.982)IHS(0.999)ANAS(0.001)ER;ATLLNVPDLS(0.012)DS(0.988)IHS(1)ANASER;ATLLNVPDLSDS(1)IHS(1)ANASER;ATLLNVPDLS(0.007)DS(0.993)IHS(0.973)ANAS(0.028)ER;ATLLNVPDLS(0.001)DS(0.999)IHS(1)ANASER;ATLLNVPDLSDS(1)IHS(1)ANASER;ATLLNVPDLSDS(1)IHS(1)ANASER;ATLLNVPDLS(0.003)DS(0.997)IHS(1)ANASER;ATLLNVPDLSDS(1)IHS(1)ANASER 226.28 1.3008e-19 5071890000.0 2255971.0 2156779.0 2048977.0 2507215.0 2254641.0 2200850.0 2192221.0 2342488.0 2429397.0 2129002.0 True False 2130827.7914633057 2053164.0994487198 2181057.3358991165 2745499.9597783214 2432068.4195475257 2187113.678786144 2413832.092695181 2334362.4558688113 1988279.7449146311 2110140.698618493 1.009803655679622 0.9729986729287409 1.0336075396901507 1.3010980554878626 1.1525622064631986 1.0364776529915969 1.1439199738081514 1.10625915011123 0.9422498443901659 1.0 21.00890776656552 -10.092799703538393 13.486274900014873 0.9999603063078494 1.083642750180385 0.04924496327216399 0.09929546528788305 0.0 0.0 0.10228634829253733 0.024808083415814596 8.076074126242823e-11 10.092799703538393 0.08368244387253554 ATLLNVPDLSDS(ph)IHSANASER ddPTM_KYSE-520_SHP099_60min_R1 5 ATLLNVPDLSDSIHSANASER 21 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ATLLNVPDLS(0.355)DS(0.493)IHS(0.048)ANAS(0.104)ER;ATLLNVPDLSDS(1)IHSANASER;ATLLNVPDLSDS(1)IHSANASER;ATLLNVPDLSDS(1)IHSANASER;ATLLNVPDLSDS(1)IHSANASER 248.95 5.571199999999999e-27 2908103000.0 1529590.0 1671520.0 1357664.0 1583090.0 1244740.0 1624080.0 1300760.0 1667720.0 1724020.0 1515910.0 True False 1444740.5935379306 1591217.670197328 1445181.1937792064 1733546.3976266368 1342693.956398198 1613943.5142981124 1432253.5149942362 1661935.068568776 1410981.4270074929 1502480.2167601355 0.9615704602442544 1.0590606468207222 0.9618637088583532 1.1537898324976015 0.8936516710306563 1.074186199787928 0.9532594832314449 1.1061277546485637 0.939101501149915 1.0 20.518914564340538 ATLPDADKER ddPTM_KYSE-520_SHP099_60min_R1 3 ATLPDADKER 10 1 P12814-3;P12814;P12814-2;P12814-4;H9KV75;H7C5W8 P12814-3 ACTN1 Alpha-actinin-1 0 ;; 97.911 0.0027031 1903320000.0 3085960.0 2750850.0 2122270.0 1880780.0 2781080.0 2606560.0 1856080.0 2559900.0 2842400.0 2498710.0 False True 2914775.647091252 2618695.03688997 2259074.919952062 2059528.765722873 2999935.1738193566 2590291.492185664 2043710.67999516 2551020.30438515 2326291.8110730145 2476573.373366964 1.1769389425068963 1.0573864134418065 0.9121776662246807 0.8316041785278874 1.2113249726741868 1.0459175246094554 0.825217093090476 1.0300604584619972 0.9393187523091077 1.0 21.2399139336135 ATLPS(ph)PDKLPGFK ddPTM_KYSE-520_SHP099_60min_R1 4 ATLPSPDKLPGFK 13 1 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 AT(0.009)LPS(0.991)PDKLPGFK;ATLPS(1)PDKLPGFK;ATLPS(1)PDKLPGFK;ATLPS(1)PDKLPGFK 154.46 2.4039e-06 3835280000.0 6301740.0 6339710.0 4928340.0 4083170.0 4389720.0 5772600.0 4500000.0 5490820.0 6963500.0 5910740.0 True False 5952169.919992754 6035140.815501291 5246028.682022805 4471233.249150179 4735165.989909785 5736571.062162751 4954903.915767754 5471773.626987027 5699103.935549865 5858375.44208614 1.0160103221164014 1.0301731043294498 0.8954749885669191 0.7632206732653506 0.8082728798657559 0.9792085056467439 0.8457812178052106 0.934008699353443 0.9728130250253201 1.0 22.482069222609617 -9.718711191196952 14.128959304728951 1.0000157006821646 0.9115008916693134 0.07955791788139344 0.08430561437078773 0.0 0.0 0.0891482878964105 0.02162163572587488 1.9111237464501584e-10 9.718711191196952 -0.08851480901285125 ATLSSTSGLDLMSESGEGEIS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 1 ATLSSTSGLDLMSESGEGEISPQR 24 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDG6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 ATLSSTSGLDLMSES(0.003)GEGEIS(0.997)PQR 77.27600000000001 0.019074 0.0 37458.0 51402.0 32228.0 37900.0 32350.0 33359.0 34216.0 41315.0 46248.0 41295.0 True False 35380.130069328254 48932.57076402502 34305.46844662318 41502.00460494948 34895.76095367847 33150.794107107264 37674.8871959799 41171.687907993466 37850.52901720544 40929.15842702386 0.8644235901505415 1.1955430466832377 0.8381669637256131 1.013996040962997 0.8525892614160916 0.8099554298487394 0.9204901503937277 1.0059255916879413 0.924781512053135 1.0 15.320841382376344 -4.796521105826023 24.999659922307668 0.9178811524676531 1.0299848899415476 0.15870954240749746 0.10043573341475692 262.6141853681582 187141.34913296485 0.025219741513741338 0.05250241999401968 1.5976398851321553e-05 4.796521105826023 0.11210373747389446 ATLWPAT(ph)PPKATLGPATPLK ddPTM_KYSE-520_SHP099_60min_R1 2 ATLWPATPPKATLGPATPLK 20 1 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 AT(0.001)LWPAT(0.999)PPKATLGPATPLK;ATLWPAT(1)PPKATLGPATPLK 161.84 2.4241000000000002e-08 1144530000.0 2073070.0 2627830.0 1804450.0 1541230.0 1751590.0 2115220.0 1445600.0 1712720.0 2420930.0 1788090.0 True False 1958072.6745374089 2501585.1023467556 1920767.73422208 1687708.0358123023 1889430.1678161847 2102018.127378979 1591735.3556964132 1706778.974071855 1981350.1386789307 1772248.9137129674 1.1048519535752626 1.4115314632106533 1.0838024610199686 0.9522974017664669 1.0661200879834174 1.1860738698240336 0.8981443539788282 0.9630582706895562 1.1179863750221652 1.0 20.75714981506797 -4.943752742121777 8.670218575327764 1.026931393175055 1.2570784447687267 0.4339994975821969 0.10447945182378407 0.24948227236378862 35.00174797597815 0.02667223334665337 0.05572424984992321 1.1382751581975904e-05 4.943752742121777 0.23014705159367166 ATMAQNENVVVQPVVAENIPVIPLS(ph)DSPPPSR ddPTM_KYSE-520_SHP099_60min_R1 2 ATMAQNENVVVQPVVAENIPVIPLSDSPPPSR 32 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 ATMAQNENVVVQPVVAENIPVIPLS(0.503)DS(0.433)PPPS(0.063)R;ATMAQNENVVVQPVVAENIPVIPLS(0.481)DS(0.402)PPPS(0.117)R 79.515 0.0065714 307680000.0 256980.0 394430.0 256710.0 193650.0 218288.0 337620.0 220721.0 278640.0 339800.0 311910.0 True False 242724.80712307038 375480.9907485002 273257.93735052255 212054.43777700458 235466.0237111764 335512.78834622 243033.63270937212 277673.46287506504 278100.8856609242 309146.72006230784 0.7851443711715581 1.2145721315523672 0.883910194148099 0.6859346194398099 0.7616643115725723 1.0852865858599376 0.7861433323969578 0.8981931389053733 0.899575727683197 1.0 18.237932173630657 -4.968049070869764 24.998762955178805 0.8635200832785045 1.012204095882586 0.10205308333639707 0.14516083385016532 351.8073211204795 275254.386767763 0.03694776200649647 0.07691210251762112 1.0763435908545508e-05 4.968049070869764 0.14868401260408148 ATNES(ph)EDEIPQLVPIGK ddPTM_KYSE-520_SHP099_60min_R1 15 ATNESEDEIPQLVPIGK 17 0 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 ATNES(1)EDEIPQLVPIGK;AT(0.023)NES(0.977)EDEIPQLVPIGK;AT(0.002)NES(0.998)EDEIPQLVPIGK;AT(0.036)NES(0.964)EDEIPQLVPIGK;AT(0.005)NES(0.995)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;AT(0.002)NES(0.998)EDEIPQLVPIGK;AT(0.068)NES(0.932)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;AT(0.012)NES(0.988)EDEIPQLVPIGK;AT(0.108)NES(0.892)EDEIPQLVPIGK;ATNES(1)EDEIPQLVPIGK;AT(0.008)NES(0.992)EDEIPQLVPIGK 335.14 1.0404e-58 228910040000.0 92027530.0 93687340.0 78479570.0 60795960.0 65861520.0 90570900.0 68656720.0 88204340.0 104372750.0 95518690.0 True False 86922579.45856723 89186459.55883563 83538488.65395175 66573989.75942814 71044446.9232121 90005613.41753055 75597211.28261559 87898379.73158777 85421289.62291414 94672468.7190164 0.9181399897424193 0.9420527505576832 0.8823947424661567 0.7032032718721715 0.7504235168311582 0.9507052539705406 0.7985131507131675 0.9284471073894374 0.902282266203923 1.0 26.49644160714624 -7.388822497856143 6.236555591753738 0.9395664692788217 0.8487812014300083 0.2273657458741295 0.0796858487792023 0.4276649153969297 19.72282990494081 0.048370822590099054 0.02275194903515627 4.0848630620568516e-08 7.388822497856143 -0.09078526784881336 ATNS(ph)PKPHMVPR ddPTM_KYSE-520_SHP099_60min_R1 5 ATNSPKPHMVPR 12 1 O75179-6;O75179-2;O75179;H0YM23;O75179-4;O75179-7 O75179-6 ANKRD17 Ankyrin repeat domain-containing protein 17 1 AT(0.415)NS(0.585)PKPHMVPR;AT(0.015)NS(0.985)PKPHMVPR;AT(0.19)NS(0.81)PKPHMVPR;AT(0.084)NS(0.916)PKPHMVPR;AT(0.129)NS(0.871)PKPHMVPR 93.10600000000001 0.0015522 13058600000.0 2370020.0 2321920.0 2413840.0 2205440.0 2090360.0 2314420.0 1956500.0 1948550.0 2425220.0 1962570.0 True False 2238550.26608226 2210371.477927025 2569439.9886805573 2415044.354510284 2254859.439478559 2299974.8462894917 2154282.113599914 1941790.9348449872 1984861.18282103 1945183.1566563544 1.1508172165803578 1.1363307719189346 1.3209244486248075 1.2415511342703538 1.1592016061636676 1.1823950039969509 1.1074957678036794 0.998256091309572 1.0203980926057779 1.0 20.891474573769152 -6.971575273781988 1.6289245801480146 0.9996068127416594 1.2069208733577843 0.7467328347083091 0.050253263244443375 0.2085146186383185 1.0864188156776247 0.03499096781584546 0.017578844998920054 1.0676397286054048e-07 6.971575273781988 0.2073140606161249 ATQCLVKS(ph)PEVK ddPTM_KYSE-520_SHP099_60min_R1 2 ATQCLVKSPEVK 12 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 ATQCLVKS(1)PEVK;ATQCLVKS(1)PEVK 147.14 3.73e-05 1307810000.0 884650.0 929320.0 859550.0 609930.0 725030.0 799390.0 631970.0 692300.0 1209950.0 803110.0 True False 835576.7009939465 884674.0722622422 914957.9683286267 667897.5638178582 782085.7361436009 794400.7104913358 695855.6950328336 689898.5728840353 990253.5803573708 795995.0702101244 1.049725974776921 1.1114064714354432 1.1494518026187008 0.8390724877750169 0.9825258540070458 0.997997023124317 0.8741959857228057 0.8667121175787156 1.2440448658758234 1.0 19.60239997027429 -5.238897003842494 24.848106599911315 0.9639614868260907 1.104315929331316 0.2307410446912166 0.10928342872630588 1041.0862111372148 1147571.145189857 0.029089576228714317 0.05033216956232752 5.769032640578736e-06 5.238897003842494 0.14035444250522533 ATRPASTSQPDPS(ph)PDR ddPTM_KYSE-520_SHP099_60min_R1 5 ATRPASTSQPDPSPDR 16 1 H7C0A2;P20749 H7C0A2 BCL3 B-cell lymphoma 3 protein 1 ATRPASTSQPDPS(1)PDR;ATRPASTSQPDPS(1)PDR;AT(0.002)RPAS(0.273)T(0.046)S(0.07)QPDPS(0.61)PDR;AT(0.044)RPAS(0.082)T(0.082)S(0.082)QPDPS(0.71)PDR;AT(0.001)RPAS(0.111)T(0.111)S(0.111)QPDPS(0.666)PDR 106.19 0.00055579 4224350000.0 2369160.0 2146520.0 2003681.0 1783627.0 1974781.0 1869274.0 1860239.0 1922329.0 2389700.0 1830471.0 True False 2237737.971996628 2043397.957207794 2132841.483262949 1953142.3738129905 2130185.0297331074 1857607.1675940158 2048290.1123030894 1915660.8893739595 1955790.719434698 1814254.4510248865 1.2334201361515265 1.12630174673319 1.175602177554582 1.0765537175392599 1.174137965338737 1.0238956098713932 1.1289982566370413 1.0558942756302943 1.078013460752353 1.0 20.790945378822258 -1.0000000000028797 0.14025162428478147 0.9855199244822698 1.7428280332176116 0.6136667123525921 0.04341381265202444 49.09941370802937 0.45949961766603836 0.17210543978015824 7.457985416352106 0.09999999999933692 1.0000000000028797 0.7573081087353418 ATS(ph)FEESER ddPTM_KYSE-520_SHP099_60min_R1 3 ATSFEESER 9 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 AT(0.385)S(0.615)FEESER;AT(0.216)S(0.784)FEESER;AT(0.022)S(0.978)FEESER 137.89 0.00046271 3432450000.0 6838450.0 6855170.0 6651610.0 6809290.0 6867780.0 6807770.0 7058420.0 7194350.0 8734560.0 6946300.0 True False 6459107.546387901 6525837.343380048 7080383.423552286 7456442.874312303 7408235.213677081 6765280.182215946 7771953.977140758 7169394.479023913 7148584.084339258 6884761.18613963 0.938174523669949 0.9478669146168547 1.0284138014556672 1.0830358051232887 1.0760337233761001 0.9826455848368099 1.1288632629389121 1.041342507777511 1.0383198328985985 1.0 22.7149751813391 -4.809223098203272 3.507287785641683 1.0534926333982977 0.9394298351243028 0.5356223374052291 0.03920680499409271 0.15717183621529848 3.90977523899224 0.010138327875588946 0.02597630820278651 1.5515897495142305e-05 4.809223098203272 -0.1140627982739949 ATS(ph)FSSAGEVPKPRPPSTR ddPTM_KYSE-520_SHP099_60min_R1 4 ATSFSSAGEVPKPRPPSTR 19 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8 O15231-3 ZNF185 Zinc finger protein 185 1 AT(0.171)S(0.828)FS(0.001)SAGEVPKPRPPSTR;AT(0.336)S(0.664)FS(0.001)SAGEVPKPRPPSTR;AT(0.002)S(0.995)FS(0.003)SAGEVPKPRPPSTR;AT(0.135)S(0.862)FS(0.003)SAGEVPKPRPPSTR 169.84 4.9076999999999995e-09 7898800000.0 2625350.0 2221470.0 2355380.0 2542850.0 2173530.0 2384510.0 2260610.0 2616620.0 2926170.0 2483380.0 True False 2479716.601994526 2114747.246705549 2507211.5635412503 2784521.699464272 2344574.445305988 2369627.388600926 2489134.520227497 2607543.5559436977 2394851.290742862 2461379.185240403 1.0074500576197618 0.8591716625323625 1.0186206085497433 1.1312851413392884 0.9525450037788443 0.9627234205970115 1.011276334484962 1.0593831180420172 0.9729712939410256 1.0 21.231035497143097 -4.807022545706451 24.98892684651965 1.015843931507351 0.9333106888620322 0.2261220419786132 0.0592973792135655 155.35433818213093 85165.46923626005 0.015537167821215456 0.03234342390815068 1.5594715432436875e-05 4.807022545706451 -0.08253324264531892 ATS(ph)LPSIPNPFPELCS(ph)PPSQS(ph)PILGGPSSAR ddPTM_KYSE-520_SHP099_60min_R1 1 ATSLPSIPNPFPELCSPPSQSPILGGPSSAR 31 0 J3QL76;Q14451-2;Q14451;Q14451-3 J3QL76 GRB7 Growth factor receptor-bound protein 7 3 AT(0.478)S(0.521)LPS(0.001)IPNPFPELCS(0.873)PPS(0.298)QS(0.814)PILGGPS(0.008)S(0.007)AR 84.198 0.0024101 20524000.0 44619.0 45987.0 40295.0 48176.0 51204.0 49839.0 47148.0 54296.0 60083.0 49825.0 True False 42143.895124228686 43777.71549210574 42892.480174279575 52754.63255535741 55233.46348909277 49527.936314161656 51914.17996013735 54107.65984878169 49173.44176917391 49383.58926326343 0.8533987859724006 0.8864830634064925 0.8685573651931249 1.0682624196091335 1.1184578584323575 1.0029229760949274 1.051243555493372 1.0956607378279914 0.9957445884913463 1.0 15.591744076786046 -5.258959707865054 24.98137484645468 1.0527150668866425 0.8711800582441248 0.8108626377245423 0.039333615012616494 84.63668612998197 852664.7385591292 0.01063995014563373 0.01738521442393159 5.508588005489961e-06 5.258959707865054 -0.1815350086425177 ATS(ph)PEAGGGGGALK ddPTM_KYSE-520_SHP099_60min_R1 1 ATSPEAGGGGGALK 14 0 Q13233 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 1 AT(0.03)S(0.97)PEAGGGGGALK 180.95 8.5163e-09 0.0 942890.0 1040700.0 853760.0 590110.0 685080.0 994910.0 740510.0 963180.0 1091800.0 901710.0 True False 890586.0120953855 990703.2098774529 908794.7356642983 646193.8769769589 738991.8984280069 988700.3976468734 815367.9774811511 959838.9533879019 893556.642038247 893721.5509197648 0.9964915931352977 1.1085144012224841 1.0168656386645494 0.7230371431817156 0.8268704023836961 1.1062734211000753 0.9123288754109411 1.0739798681145072 0.9998154806926742 1.0 19.769465887858317 -6.270460848587604 24.98020451433027 1.0164688459390783 0.9368752601831554 0.12815458569575588 0.10954745639331857 1758.9665846953558 4870519.060116221 0.042658627401763294 0.03816153705412166 5.364622310401305e-07 6.270460848587604 -0.0795935857559229 ATS(ph)PESTSR ddPTM_KYSE-520_SHP099_60min_R1 3 ATSPESTSR 9 0 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 AT(0.037)S(0.962)PESTSR;AT(0.01)S(0.99)PESTSR;AT(0.065)S(0.935)PESTSR 106.35 0.0018402000000000002 800060000.0 2373990.0 2067910.0 1833360.0 2106040.0 1948770.0 2535410.0 2749900.0 2177950.0 2640680.0 2386060.0 True False 2242300.0422682622 1968564.49960381 1951541.3190797186 2306197.408395986 2102127.112015456 2519585.5657274127 3027886.7284377203 2170395.199787351 2161199.078125628 2364921.364726588 0.9481499367009599 0.8324016726160358 0.8252034711121733 0.9751687488613849 0.888878227990674 1.065399299658619 1.2803329419740679 0.91774518686302 0.913856634034632 1.0 21.17336078307698 -6.257167399324342 23.02803642325458 1.0456300274037882 0.8912322050956978 0.3115673219595966 0.10458895009016483 155.43329117245312 837860.042957873 0.03744805626285437 0.03612427402122511 5.531368608593689e-07 6.257167399324342 -0.1543978223080904 ATS(ph)PLVSLYPALECR ddPTM_KYSE-520_SHP099_60min_R1 9 ATSPLVSLYPALECR 15 0 A0A087WXV6;Q96G74-2;Q96G74-3;Q96G74-5;Q96G74;H7BZQ3;Q96G74-4 A0A087WXV6 OTUD5 OTU domain-containing protein 5 1 AT(0.022)S(0.978)PLVSLYPALECR;ATS(1)PLVSLYPALECR;AT(0.017)S(0.983)PLVSLYPALECR;AT(0.164)S(0.836)PLVSLYPALECR;AT(0.027)S(0.973)PLVSLYPALECR;AT(0.021)S(0.979)PLVSLYPALECR;AT(0.043)S(0.957)PLVSLYPALECR;ATS(1)PLVSLYPALECR;AT(0.018)S(0.982)PLVSLYPALECR 405.65 1.2851999999999995e-96 2905011000.0 2833110.0 3160640.0 2446710.0 2005420.0 2030810.0 2844190.0 2171540.0 2659230.0 3316330.0 2965990.0 True False 2675951.7406352344 3008798.1101826383 2604428.8414744115 2196014.513848494 2190623.1932717087 2826438.3552112896 2391060.455388067 2650005.7517989473 2714168.0698760785 2939713.6361053037 0.9102763302416368 1.0235004094374518 0.8859464437239893 0.7470164736038358 0.7451825124619853 0.9614672396988683 0.8133650931237905 0.9014503042921631 0.9232763479207313 1.0 21.48724419517073 -9.322113145143845 11.49020842505525 0.999999999999975 0.8768344688192776 0.1562537302367194 0.08417308884813686 0.0 0.0 0.08785782987829846 0.02130865368386893 4.763068801601706e-10 9.322113145143845 -0.1231655311806974 ATS(ph)TSDMLLK ddPTM_KYSE-520_SHP099_60min_R1 1 ATSTSDMLLK 10 0 E5RJW4;Q9NW64-2;Q9NW64 E5RJW4 RBM22 Pre-mRNA-splicing factor RBM22 1 AT(0.012)S(0.947)T(0.039)S(0.002)DMLLK 93.839 0.0043673 0.0 455440.0 405100.0 332110.0 305870.0 367940.0 360260.0 362420.0 434740.0 443810.0 436560.0 True False 430175.8353028693 385638.38793250325 353518.3419947884 334939.7928368312 396894.78470777266 358011.4837083387 399056.9504783446 433231.98840907903 363225.2915396548 432692.41803854064 0.9941838991607956 0.891252935932318 0.817019959807338 0.7740828793699767 0.9172677129563674 0.8274041068971308 0.9222647170184524 1.001247006760563 0.8394537930343436 1.0 18.72298231543227 -6.939088526619418 7.096174426244563 0.9444727378139955 0.866827555532922 0.19956812104264154 0.0702435891377289 0.3537532904364658 33.63469345833137 0.029979186206973082 0.020092753632923864 1.1505658336144577e-07 6.939088526619418 -0.07764518228107353 ATSACAPISS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 ATSACAPISSPK 12 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 ATSACAPIS(0.091)S(0.909)PK;ATSACAPISS(1)PK 246.31 1.622e-15 1232070000.0 1533830.0 1694250.0 1299910.0 1132860.0 1278660.0 1969220.0 1584350.0 2220800.0 2557300.0 2293700.0 True False 1448745.3922857007 1612855.686878905 1383704.2785295378 1240526.6737932225 1379283.2674197978 1956929.3675349294 1744511.559765919 2213096.5631386167 2092958.7842868778 2273379.6024715942 0.6372650615456565 0.7094528714542109 0.6086551832457673 0.5456751140216685 0.6067104965313561 0.8608018499890544 0.7673648333385699 0.9734830737165767 0.9206376189930776 1.0 21.116407170716258 -6.71997372906329 1.1647326734620942 0.9650442155939822 0.6209038157608104 0.8237067553384445 0.0662629933780894 0.20496598758090973 0.558766936600648 0.04569534609090724 0.027031979922095096 1.905575984801946e-07 6.71997372906329 -0.3441403998331718 ATSCFPRPMT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 ATSCFPRPMTPR 12 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 ATS(0.003)CFPRPMT(0.997)PR 78.486 0.039875 767550000.0 964110.0 1026600.0 845950.0 706640.0 923340.0 867960.0 733790.0 964540.0 1057900.0 1008900.0 True False 910628.8963943631 977280.5950419836 900481.2905678565 773798.8531409369 996001.6049140478 862542.7396865864 807968.6543002712 961194.2358653295 865812.0274887906 999961.9309123222 0.910663564525446 0.9773178006390252 0.9005155723741364 0.773828312078797 0.9960395232299881 0.8625755771518617 0.8079994141008101 0.9612308290460391 0.865844989417608 1.0 19.931513646194727 -9.995579590329625 3.9841006394451317 1.0000101431759085 0.8955162876025005 0.17772772132246706 0.06767709005476222 65703946.63244977 130384249.25203699 9402.637087345161 0.017315237585196496 1.0102303452071492e-10 9.995579590329625 -0.10449385557340807 ATSDTLES(ph)PPKIIPK ddPTM_KYSE-520_SHP099_60min_R1 1 ATSDTLESPPKIIPK 15 1 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 ATSDT(0.001)LES(0.999)PPKIIPK 122.22 7.1893e-05 150990000.0 572340.0 662940.0 570260.0 442980.0 470130.0 617760.0 437020.0 544030.0 765340.0 642660.0 True False 540591.1592684968 631091.3673067736 607019.872048261 485080.6860132071 507126.556326209 613904.3306935626 481198.24650418287 542142.8869075566 626373.5486513585 636966.5323819142 0.8486963314178768 0.9907763363120968 0.9529855042435766 0.7615481526152791 0.7961588726331145 0.9637936994866727 0.7554529508870094 0.8511324525642376 0.9833696384471824 1.0 19.28085804654934 -7.7846503143820565 8.027355883595105 0.9930702692751493 0.8660554799428442 0.2947714372621859 0.07833410067903887 0.28614763120903164 75.35494694300972 0.07423195601613147 0.0206172493575407 1.6419112766883542e-08 7.7846503143820565 -0.12701478933230514 ATSEEDVSIKS(ph)PICEK ddPTM_KYSE-520_SHP099_60min_R1 6 ATSEEDVSIKSPICEK 16 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ATSEEDVS(0.023)IKS(0.977)PICEK;ATSEEDVSIKS(1)PICEK;ATS(0.001)EEDVS(0.027)IKS(0.972)PICEK;ATSEEDVSIKS(1)PICEK;ATSEEDVS(0.051)IKS(0.949)PICEK;ATSEEDVS(0.001)IKS(0.999)PICEK 235.85 3.6045000000000003e-23 11469560000.0 11491950.0 11829420.0 9316750.0 9916490.0 11213520.0 11390480.0 11255410.0 12087850.0 14152600.0 12626460.0 True False 10854468.624865627 11261116.90687857 9917322.612327076 10858950.228098558 12095960.22779885 11319387.789235964 12393216.685015911 12045920.069675393 11582844.598012907 12514599.387637235 0.8673444741338187 0.899838385398342 0.7924602542310764 0.8677025841375123 0.9665479375830484 0.9044946177356679 0.9903007120834221 0.9625493950349833 0.9255465747833065 1.0 23.57710877299889 -5.714001725542181 5.686813516793038 0.9553513207947332 0.8540213954660208 0.6545815381467168 0.03609459328019256 0.12212985932866124 8.956900277822731 0.010751935432973116 0.013722849363871253 1.931960640920775e-06 5.714001725542181 -0.10132992532871232 ATSFSS(ph)AGEVPKPRPPSTR ddPTM_KYSE-520_SHP099_60min_R1 1 ATSFSSAGEVPKPRPPSTR 19 2 O15231-3;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8 O15231-3 ZNF185 Zinc finger protein 185 1 ATS(0.298)FS(0.078)S(0.436)AGEVPKPRPPS(0.094)T(0.094)R 112.32 3.4683e-05 3147200000.0 695310.0 599050.0 549310.0 652420.0 564320.0 629910.0 604100.0 634540.0 740820.0 645830.0 True False 656739.7682338792 570270.7388076187 584719.4015270751 714425.800642775 608728.7734584188 625978.4980367487 665168.3234478441 632338.9288427499 606305.7625524597 640108.4486481367 1.0259820341707202 0.8908970659768509 0.9134692765920536 1.1161011890275645 0.9509775644174209 0.9779256926834361 1.0391494204655978 0.9878621820696236 0.9471922513020007 1.0 19.287956824974987 ATSGSS(ph)LPVGINR ddPTM_KYSE-520_SHP099_60min_R1 3 ATSGSSLPVGINR 13 0 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 ATSGS(0.098)S(0.902)LPVGINR;ATSGS(0.004)S(0.996)LPVGINR;ATSGS(0.303)S(0.697)LPVGINR 228.73 3.9308e-11 626330000.0 1306800.0 1531090.0 1200490.0 979790.0 1148730.0 1388220.0 1077290.0 1408790.0 1580860.0 1456430.0 True False 1234309.1989587836 1457534.1381870573 1277875.5062519142 1072908.9470153954 1239128.5156203718 1379555.6040459373 1186192.9865372106 1403903.2363040564 1293815.6742375763 1443527.163285394 0.855064754132897 1.009703298460823 0.8852452096180407 0.7432551144888119 0.858403324257632 0.9556838548892557 0.8217323627201417 0.9725506190744928 0.8962877229777361 1.0 20.46116682478059 -8.06754564473529 0.8228048160569479 0.9973464159035351 0.8784322242510292 0.19690577626197892 0.07229168021048685 1.275296224374818 1.9348687411934258 0.07295566044484968 0.026416671238254454 8.559617446537222e-09 8.06754564473529 -0.11891419165250594 ATSS(ph)SSGS(ph)LSATGR ddPTM_KYSE-520_SHP099_60min_R1 1 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 2 AT(0.105)S(0.45)S(0.442)S(0.27)S(0.26)GS(0.47)LS(0.002)ATGR 61.648999999999994 0.035173 17778000.0 73743.0 70294.0 70739.0 67448.0 62448.0 61329.0 65074.0 71032.0 84802.0 70000.0 True False 69652.32878697399 66916.9707265549 75298.9491264018 73858.2376410194 67362.3023194841 60946.222962162516 71652.31498103797 70785.60657099352 69404.09448445454 69379.85445917587 1.0039272830697339 0.964501457205129 1.085314313691863 1.0645487543430734 0.9709202021909842 0.8784426464604963 1.032753895775311 1.0202616757094067 1.000349381322109 1.0 16.082229193779316 -3.838571397984199 18.348467280989755 1.0021161132503942 2.666690343319981 0.00011007807529284097 0.05456966490716297 28455.455938163035 3467951.8934390284 0.014171541702314827 144382.73931252994 0.00014502023415370068 3.838571397984199 1.6645742300695867 ATSS(ph)SSGSLSATGR ddPTM_KYSE-520_SHP099_60min_R1 6 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATS(0.181)S(0.601)S(0.079)S(0.005)GS(0.129)LS(0.004)ATGR;ATS(0.001)S(0.972)S(0.014)S(0.014)GSLSATGR;ATS(0.097)S(0.862)S(0.04)S(0.001)GSLSATGR;ATS(0.014)S(0.489)S(0.489)S(0.004)GS(0.004)LSATGR;ATSS(0.499)S(0.499)S(0.002)GSLSATGR;ATS(0.001)S(0.496)S(0.496)S(0.006)GSLSATGR 309.98 2.0838999999999997e-42 5734070000.0 7448980.0 8005550.0 6630240.0 6307160.0 6143030.0 8552240.0 6863780.0 7894010.0 9324640.0 8566600.0 True False 7035770.230226522 7620951.3614244675 7057635.879159078 6906590.590083201 6626451.511940508 8498862.297867645 7557637.8664374305 7866627.521785787 7631520.431045542 8490706.588713957 0.8286436654846406 0.8975638578247906 0.8312189103955435 0.8134294263876225 0.7804358144643156 1.0009605453996642 0.8901070585201021 0.9264985710661925 0.8988086387521075 1.0 23.01745318783935 -6.257024490609373 24.999391620781516 0.9353581293319042 0.833115957326316 0.6208520616230765 0.043913734716700986 284.8095543881354 1612741.4764898801 0.014892315061244513 0.014404055703056182 5.533189057355262e-07 6.257024490609373 -0.10224217200558816 ATSSS(ph)NPSS(ph)PAPDWYK ddPTM_KYSE-520_SHP099_60min_R1 2 ATSSSNPSSPAPDWYK 16 0 P46100-2;P46100-5;P46100-3;P46100-4;P46100 P46100-2 ATRX Transcriptional regulator ATRX 2 ATSS(0.011)S(0.988)NPS(0.248)S(0.752)PAPDWYK;AT(0.001)S(0.008)S(0.073)S(0.915)NPS(0.025)S(0.978)PAPDWYK 156.39 2.2019e-06 753470000.0 1122940.0 996080.0 835110.0 932800.0 974210.0 1028880.0 1135560.0 1103090.0 1094010.0 1003270.0 True False 1060648.2796746087 948226.8216534388 888942.5268232446 1021453.0315434531 1050874.78450334 1022458.3782763429 1250353.4867976068 1099263.6382531405 895365.3617478133 994381.8083322492 1.0666408725371797 0.9535842406889762 0.8939649935009928 1.027224173837821 1.0568121577624587 1.0282352007134794 1.2574179015751168 1.105474405346168 0.9004241170194941 1.0 19.9234403777571 -5.557879993378401 3.7596103871786064 1.071357080970133 0.9680722214738116 0.1343310230969238 0.09374204326932362 0.3907861496702015 11.825444787431795 0.029365744110580416 0.040344255467356614 2.7677063274745104e-06 5.557879993378401 -0.10328485949632138 ATSSS(ph)SGSLSATGR ddPTM_KYSE-520_SHP099_60min_R1 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 AT(0.059)S(0.008)S(0.037)S(0.632)S(0.128)GS(0.128)LS(0.008)ATGR;ATSSS(0.562)S(0.38)GS(0.058)LSATGR 202.8 2.6566e-11 810360000.0 1566990.0 1685080.0 1470160.0 1255530.0 1296590.0 1465100.0 1388390.0 1566550.0 1946660.0 1616530.0 True False 1480065.94098288 1604126.2274433519 1564928.86593917 1374855.1937111423 1398624.2564120535 1455955.767448749 1528742.0105806226 1561116.0036855198 1593195.6153051602 1602208.8018413084 0.9237659531528862 1.001196738901846 0.9767321613392117 0.8580998881863062 0.872935072385516 0.908717868592108 0.9541465561940146 0.974352407683341 0.9943745243904603 1.0 20.611630743132793 -7.207030149286142 2.1687143095002805 0.9934862243514893 0.9247098705296466 0.351456203803418 0.04031827717398138 0.4529797475890564 4.056516783354698 0.030947253763468584 0.013631690787592096 6.208259341925899e-08 7.207030149286142 -0.06877635382184266 ATSSSNPS(ph)SPAPDWYKDFVTDADAEVLEHSGK ddPTM_KYSE-520_SHP099_60min_R1 1 ATSSSNPSSPAPDWYKDFVTDADAEVLEHSGK 32 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100 P46100-2 ATRX Transcriptional regulator ATRX 1 AT(0.003)S(0.003)S(0.008)S(0.022)NPS(0.45)S(0.45)PAPDWY(0.056)KDFVT(0.009)DADAEVLEHSGK 63.925 0.018854 204130000.0 49873.0 46756.0 41892.0 38267.0 38097.0 41694.0 39595.0 35735.0 52934.0 43421.0 True False 47106.445270639364 44509.77157781319 44592.42534956989 41903.884174606916 41095.01715772143 41433.77228039596 43597.649009960944 35611.04362561168 43322.51995754957 43036.32372102684 1.0945740992189796 1.0342373076831013 1.0361578660535717 0.9736864246639488 0.9548914406376927 0.9627628174976317 1.0130430585236037 0.8274648145239392 1.006650108833132 1.0 15.393267223801622 -4.717887071847499 0.7697904184468526 0.949934881874271 1.1236655823559663 0.4249115725296606 0.050638273931366114 1.4097767715934801 0.9818383551389996 0.020841423382586117 0.18932654988870992 1.914753747355691e-05 4.717887071847499 0.17373070048169525 ATSSSNPSS(ph)PAPDWYKDFVTDADAEVLEHSGK ddPTM_KYSE-520_SHP099_60min_R1 1 ATSSSNPSSPAPDWYKDFVTDADAEVLEHSGK 32 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100 P46100-2 ATRX Transcriptional regulator ATRX 1 ATSSSNPS(0.018)S(0.982)PAPDWYKDFVTDADAEVLEHSGK 267.73 9.6746e-42 574130000.0 249700.0 218690.0 200280.0 216940.0 187930.0 228660.0 199030.0 212210.0 262550.0 251050.0 True False 235848.64323539083 208183.80413961783 213190.36925933007 237557.91237461063 202719.02182456834 227232.8481228795 219149.89474561255 211473.8930401863 214877.5383468967 248825.8923139446 0.9478460663483512 0.8366645536910262 0.8567853099079694 0.9547154042750619 0.8147022801340824 0.9132202682355055 0.8807358941131024 0.8498870076325049 0.8635658305036232 1.0 17.924777091614853 -9.907187693679736 5.641332753145794 1.0000000832702147 0.8782670168137251 0.4038392109921207 0.04378090844007222 4.320093867853067e-08 8.388804937731485e-09 0.03994792940239725 0.009688789385311609 1.2382613182674647e-10 9.907187693679736 -0.12173306645648962 ATSSSS(ph)GSLS(ph)ATGR ddPTM_KYSE-520_SHP099_60min_R1 1 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 2 AT(0.001)S(0.003)S(0.017)S(0.092)S(0.757)GS(0.378)LS(0.752)ATGR 81.619 0.0079235 29405000.0 65848.0 61219.0 59879.0 58061.0 52895.0 54896.0 54807.0 56636.0 67841.0 55739.0 True False 62195.280175266395 58277.94734840757 63738.89614978747 63579.099983323824 57057.535568618885 54553.373701362754 60347.426424774094 56439.54293494177 55522.78453243884 55245.19582428582 1.1258043210324782 1.0548962037127678 1.1537455012833497 1.1508530114644722 1.032805381848902 0.9874772437204586 1.0923560958443617 1.0216190221219363 1.0050246669237253 1.0 15.753561391350692 -5.8076840448756535 8.876924417155553 1.025757698459109 1.1188368835542009 0.6316555812920568 0.0366566529979802 0.2123723803166198 37.85332427513158 0.011669334328664661 0.013295486532189838 1.5570980295674793e-06 5.8076840448756535 0.09307918509509183 ATSSSS(ph)GSLSATGR ddPTM_KYSE-520_SHP099_60min_R1 1 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATSSS(0.027)S(0.857)GS(0.116)LSATGR 178.67 8.521100000000001e-09 94958000.0 94349.0 92829.0 86299.0 74915.0 70779.0 106040.0 84855.0 106740.0 120810.0 104380.0 True False 89115.27288993138 88369.35550083034 91861.97162328214 82034.89907598386 76348.90462257837 105378.16502645919 93432.97150499397 106369.74385330323 98873.94937226658 103455.27440641104 0.8613893627100464 0.8541793157271269 0.8879389876480722 0.7929503792500716 0.7379894844476589 1.018586685222972 0.9031242925126687 1.0281712987918146 0.955716853873034 1.0 16.658647673680143 -6.274005220079797 24.999384175433665 0.978005815695715 0.8299117352993501 0.699437333959864 0.05051132422342828 473.5424096410373 942096.5730774798 0.018259117916140495 0.016209138400128453 5.321018635353343e-07 6.274005220079797 -0.14809408039636485 ATSSSSGS(ph)LS(ph)ATGR ddPTM_KYSE-520_SHP099_60min_R1 1 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 2 ATS(0.002)S(0.012)S(0.06)S(0.271)GS(0.757)LS(0.897)ATGR 96.464 0.0015039 0.0 81442.0 80079.0 75711.0 74539.0 67816.0 68497.0 70243.0 71427.0 93472.0 71798.0 True False 76924.24990939803 76231.8846389704 80591.4522018831 81623.16414903245 73152.73337974215 68069.484815328 77343.84794561646 71179.23640818708 76499.84103736871 71161.92557799879 1.08097482304752 1.0712453888760298 1.1325080307663802 1.1470061200011707 1.0279757438486017 0.9565436047780742 1.0868712070029896 1.0002432597213704 1.0750108350218708 1.0 16.11881792871894 -5.789932919746575 17.896883366320818 1.024177977053948 1.1070676464443616 0.5039170090476213 0.04057962821983593 7.997503698354718 5022.592176116931 0.012625558874221588 0.014332765080365257 1.622060618236254e-06 5.789932919746575 0.08288966939041353 ATSSSSGS(ph)LSATGR ddPTM_KYSE-520_SHP099_60min_R1 2 ATSSSSGSLSATGR 14 0 Q03252 Q03252 LMNB2 Lamin-B2 1 ATS(0.01)S(0.007)S(0.144)S(0.028)GS(0.773)LS(0.037)ATGR;ATSSS(0.002)S(0.118)GS(0.879)LSATGR 157.2 5.002e-07 265364000.0 533614.0 515456.0 493283.0 376024.0 422760.0 514165.0 457175.0 512227.0 611153.0 540622.0 True False 504013.3676868637 490692.72004477074 525080.8114607062 411761.2079042624 456028.80682464025 510955.9055151778 503390.7105980269 510450.20409168064 500183.02111339156 535832.5096775518 0.9406173731231128 0.915757650352449 0.97993459145785 0.7684513359445998 0.8510659554775146 0.9535739177577262 0.9394553363343942 0.952630150042323 0.9334689703959674 1.0 19.031422588517003 -6.2885091760638 23.180469717294102 0.9518419391128015 0.8906457959889773 0.2543088582210208 0.05514718318016729 502.648502289066 430426.38841887953 0.02070925764744876 0.018271034957379924 5.146249335596356e-07 6.2885091760638 -0.061196143123824154 ATSVALPGWS(ph)PSETR ddPTM_KYSE-520_SHP099_60min_R1 10 ATSVALPGWSPSETR 15 0 Q16513-3;Q16513-2;Q16513;Q16513-4;B1AL79;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 ATSVALPGWS(0.985)PS(0.015)ETR;ATSVALPGWS(0.978)PS(0.022)ETR;ATSVALPGWS(0.978)PS(0.018)ET(0.005)R;ATSVALPGWS(0.985)PS(0.015)ETR;ATSVALPGWS(0.941)PS(0.059)ETR;ATSVALPGWS(0.998)PS(0.002)ETR;ATSVALPGWS(1)PSETR;ATSVALPGWS(0.98)PS(0.02)ETR;ATSVALPGWS(0.988)PS(0.012)ETR;ATSVALPGWS(0.99)PS(0.01)ETR 283.1 6.0642999999999996e-33 7001330000.0 7700680.0 8201260.0 6624510.0 5845270.0 5616100.0 7057510.0 5633830.0 6620160.0 8362140.0 7137490.0 True False 7273507.929475009 7807259.15925777 7051536.514190762 6400802.7033554865 6058055.118762087 7013461.462239583 6203352.517282194 6597196.210116952 6843786.168395041 7074257.3914832 1.028165576535523 1.103615365855509 0.9967882314658509 0.904802066017771 0.8563520923136705 0.9914060337531951 0.8768909828967348 0.9325637794942846 0.9674211425547469 1.0 22.75414728068148 -5.011291233517109 4.165439757865448 0.9276018681159733 1.0649230034003518 0.5614178615098081 0.04700604249644806 0.13256937463433446 5.450315731275084 0.012391853894338434 0.025022818018693573 9.743360386330151e-06 5.011291233517109 0.1373211352843785 ATT(ph)PASTANSDVATIPTDTPLKEENEGFVK ddPTM_KYSE-520_SHP099_60min_R1 1 ATTPASTANSDVATIPTDTPLKEENEGFVK 30 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 AT(0.031)T(0.964)PAS(0.005)TANSDVATIPTDTPLKEENEGFVK 262.34 1.0672999999999998e-40 686520000.0 630480.0 795480.0 582020.0 594850.0 563270.0 972480.0 670830.0 882710.0 959160.0 929660.0 True False 595506.0175692796 757263.9467601774 619537.9404649255 651384.3651518265 607596.1444321014 966410.3915968603 738644.0430698849 879648.0850360626 785000.7224559503 921423.9356645348 0.6462888519819037 0.8218409761778496 0.6723701398294066 0.706932325002004 0.6594099859082785 1.0488227559444514 0.8016332270955949 0.9546616394349 0.8519430547349571 1.0 19.813505549496373 -6.2475700948254485 24.98492351063827 0.9204673092524327 0.7067594519538091 0.6757965554484343 0.07944308157046112 481.4215016483011 867260.764111117 0.024791309472006324 0.024665046255113645 5.65496478987282e-07 6.2475700948254485 -0.21370785729862363 ATT(ph)PPNQGRPDS(ph)PVYANLQELK ddPTM_KYSE-520_SHP099_60min_R1 11 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 2 AT(0.448)T(0.552)PPNQGRPDS(0.989)PVY(0.011)ANLQELK;AT(0.444)T(0.556)PPNQGRPDS(1)PVYANLQELK;AT(0.442)T(0.558)PPNQGRPDS(0.997)PVY(0.003)ANLQELK;AT(0.466)T(0.534)PPNQGRPDS(0.999)PVY(0.001)ANLQELK;AT(0.457)T(0.543)PPNQGRPDS(0.999)PVY(0.001)ANLQELK;AT(0.466)T(0.534)PPNQGRPDS(1)PVYANLQELK;AT(0.125)T(0.875)PPNQGRPDS(0.998)PVY(0.002)ANLQELK;AT(0.003)T(0.997)PPNQGRPDS(1)PVYANLQELK;AT(0.033)T(0.967)PPNQGRPDS(1)PVYANLQELK;AT(0.452)T(0.548)PPNQGRPDS(0.999)PVY(0.001)ANLQELK;AT(0.031)T(0.969)PPNQGRPDS(0.998)PVY(0.002)ANLQELK 202.81 2.9524e-14 42651050000.0 18641010.0 16820700.0 16058170.0 16344400.0 16597310.0 15601320.0 15663890.0 16405560.0 20412490.0 16458180.0 True False 17606956.015367854 16012608.323614579 17093305.332180455 17897766.86187694 17903423.871224027 15503946.37486419 17247348.866034526 16348652.941446505 16706096.372998094 16312373.329470297 1.0793620069716487 0.9816234584752817 1.047873597969911 1.0971896302509478 1.0975364227889084 0.9504408746490871 1.057316953068692 1.0022240547861092 1.0241364659559677 1.0 23.959463362972706 -6.246040009047074 24.99189027023128 1.0101184977809703 1.0576356649125211 0.31385279172563674 0.03956273497730936 1181.9712380442593 1918243.2492667967 0.0135409895112433 0.013497940044202357 5.674923232039973e-07 6.246040009047074 0.04751716713155085 ATT(ph)PPNQGRPDSPVYANLQELK ddPTM_KYSE-520_SHP099_60min_R1 1 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 AT(0.199)T(0.801)PPNQGRPDSPVYANLQELK 113.93 0.00046548 478320000.0 381220.0 469800.0 315660.0 263980.0 323110.0 464220.0 283220.0 356720.0 504700.0 437240.0 True False 360072.96665677056 447230.1028158231 336007.9486738578 289068.5798315186 348536.91875558125 461322.630786334 311850.6415608323 355482.6215790736 413059.2024516429 433366.39376757276 0.8308742252171227 1.0319907340477485 0.775343804933035 0.6670304481121224 0.8042546071131486 1.0645094714791268 0.7196004259806241 0.8202819293129809 0.9531408258508821 1.0 18.725227755637913 ATTPASTANSDVATIPTDT(ph)PLKEENEGFVK ddPTM_KYSE-520_SHP099_60min_R1 1 ATTPASTANSDVATIPTDTPLKEENEGFVK 30 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 ATTPASTANSDVATIPTDT(1)PLKEENEGFVK 292.44 4.9757999999999995e-52 375650000.0 377540.0 465500.0 328390.0 323000.0 329580.0 556940.0 398180.0 548970.0 511890.0 503480.0 True False 356597.1035926691 443136.6812702552 349558.5448425775 353697.8228865092 355516.07094631647 553463.9308735969 438431.92026231234 547065.7512005613 418943.67969679285 499019.5589015129 0.7145954446708321 0.8880146546675001 0.700490669367865 0.7087854906230547 0.7124291314931838 1.1091026814498652 0.8785866454361597 1.0962811806511392 0.8395335858558524 1.0 18.92873683704789 -6.247608441563149 24.97395158410801 0.9840862582755237 0.7483464877213376 0.6248867306083925 0.09289098680900554 508.5033915914507 918184.0352177371 0.02919057858481776 0.02904561426677371 5.654465497601599e-07 6.247608441563149 -0.23573977055418605 ATTPPNQGRPDS(ph)PVYANLQELK ddPTM_KYSE-520_SHP099_60min_R1 2 ATTPPNQGRPDSPVYANLQELK 22 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 ATTPPNQGRPDS(1)PVYANLQELK;ATTPPNQGRPDS(1)PVYANLQELK 215.59 1.2719e-19 3113500000.0 947170.0 1082800.0 730660.0 771650.0 715390.0 1046220.0 711260.0 1053870.0 1096410.0 984960.0 True False 894628.5919634172 1030780.6626840638 777759.5126973345 844987.3839949674 771687.1229876981 1039690.152904395 783161.10202866 1050214.3709451081 897329.5822468913 976234.0206872836 0.9164079237205697 1.0558745555275553 0.7966937191451082 0.8655582228122756 0.7904734998319548 1.0650009432906644 0.8022268077456496 1.0757813686986049 0.9191746684008796 1.0 19.896867503387835 -7.269566253693286 24.93026218767687 0.9981085032525177 0.9019349207246197 0.1750518024168749 0.09875674683287851 1125.8524565363214 3453677.4216082306 0.05179753211656616 0.02556165636807945 5.375684182420013e-08 7.269566253693286 -0.09617358252789798 ATVPVAAATAAEGEGS(ph)PPAVAAVAGPPAAAEVGGGVGGSSR ddPTM_KYSE-520_SHP099_60min_R1 1 ATVPVAAATAAEGEGSPPAVAAVAGPPAAAEVGGGVGGSSR 41 0 O75179-6;O75179-2;O75179;O75179-4;H0YLQ3;A0A1W2PQ15;O75179-5;O75179-3 O75179-6 ANKRD17 Ankyrin repeat domain-containing protein 17 1 ATVPVAAATAAEGEGS(1)PPAVAAVAGPPAAAEVGGGVGGSSR 157.16 2.9323e-08 198510000.0 21672.0 19315.0 14031.0 4679.1 15748.0 19457.0 18783.0 14243.0 26751.0 19428.0 True False 20469.81095793907 18387.078407593923 14935.460710393761 5123.80025717729 16987.27800613688 19335.561645792313 20681.76894441462 14193.594357341182 21893.692737832185 19255.88303475529 1.0630419244338334 0.9548810809873924 0.7756310465449172 0.26609012154515327 0.8821863933986427 1.0041378840374762 1.0740493649180214 0.737104308938879 1.1369872105224084 1.0 14.233011663195986 -5.9943828725764945 24.999994002423435 0.9752397299486337 0.7536076233098115 0.19214997494816632 0.21644888117846617 278.41868281483664 1239137.2876644295 0.07159655348656713 0.08094197919878698 1.013017918714599e-06 5.9943828725764945 -0.22163210663882227 ATVT(ph)PS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 8 ATVTPSPVK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 ATVT(1)PS(1)PVK;ATVT(1)PS(1)PVK;ATVT(1)PS(1)PVK;AT(0.164)VT(0.836)PS(1)PVK;ATVT(1)PS(1)PVK;ATVT(1)PS(1)PVK;ATVT(1)PS(1)PVK;ATVT(1)PS(1)PVK 191.53 1.0588e-05 20625680000.0 44365000.0 35377400.0 33214500.0 37125600.0 40727800.0 39348300.0 39126300.0 41816500.0 39490200.0 38346400.0 True False 41903985.010565124 33677816.60144003 35355559.81507897 40654005.86178139 43932846.150517024 39102712.66418917 43081568.239889786 41671448.32154444 32319775.14693062 38006680.72904779 1.1025426111083334 0.8861025471161629 0.9302459235293699 1.0696542050490165 1.1559243087739566 1.0288378757133532 1.1335261962764183 1.0964243002071932 0.850370896036423 1.0 25.179749698755174 -3.926313139722914 20.746073814312464 1.0251916582880367 3.715845860540932 0.05898413256305568 0.09769805127328769 1941.5838350619783 564842.7312583822 0.024696891597850986 8070.196639372283 0.0001184914080467192 3.926313139722914 2.6906542022528956 ATVT(ph)PS(ph)PVKGK ddPTM_KYSE-520_SHP099_60min_R1 13 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 AT(0.04)VT(0.961)PS(0.999)PVKGK;AT(0.303)VT(0.703)PS(0.993)PVKGK;AT(0.074)VT(0.926)PS(1)PVKGK;AT(0.002)VT(0.998)PS(1)PVKGK;AT(0.004)VT(0.996)PS(1)PVKGK;AT(0.094)VT(0.908)PS(0.998)PVKGK;AT(0.001)VT(0.999)PS(1)PVKGK;AT(0.304)VT(0.712)PS(0.984)PVKGK;AT(0.005)VT(0.995)PS(1)PVKGK;AT(0.005)VT(0.995)PS(1)PVKGK;AT(0.004)VT(0.996)PS(1)PVKGK;AT(0.013)VT(0.987)PS(1)PVKGK;AT(0.001)VT(0.999)PS(1)PVKGK 151.74 8.743200000000001e-05 94563040000.0 99923880.0 89909810.0 85396540.0 78970580.0 86357900.0 83569340.0 82247310.0 81648610.0 100498440.0 78483990.0 True False 94380903.18308365 85590407.7702237 90901337.60769513 86475920.17982933 93153775.42076255 83047752.7505873 90561670.7511922 81365390.02883884 82250456.65550672 77788682.90822032 1.2132986400404775 1.1002938290034854 1.1685676400376375 1.1116773924795555 1.1975234949108327 1.0676071331426442 1.164201106966192 1.0459797876361852 1.057357620420835 1.0 26.213056944104164 -7.529261552642544 0.7640116549877346 0.999290488573128 1.1524424192913838 0.5817700828007841 0.04361923546556895 0.42028021916403674 0.4976455969984722 0.03789115208135737 0.01599759084232497 2.9562315481098106e-08 7.529261552642544 0.15315193071825584 ATVT(ph)PSPVKGK ddPTM_KYSE-520_SHP099_60min_R1 1 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 ATVT(0.577)PS(0.423)PVKGK 208.08 4.956600000000001e-09 3010000000.0 3991000.0 4204000.0 3596400.0 2464600.0 2649600.0 3393700.0 2783200.0 3289700.0 4458100.0 3473600.0 True False 3769611.274138743 4002033.5296673537 3828229.6984434533 2698834.8429909907 2858108.445838223 3372518.6594708995 3064553.0174144055 3278288.798521755 3648621.4195555206 3442826.606419904 1.0949175503377013 1.1624266880605274 1.1119437996978647 0.7839008906107622 0.8301633432565713 0.9795784234913544 0.8901270286745999 0.9522085115784418 1.0597749572260964 1.0 21.71516209256213 -5.140437605463928 7.708122393718592 0.9227118736650093 1.130329456910461 0.5705809885491875 0.07753381399328116 0.19616155309604852 11.564867041046334 0.021993732738481715 0.03831844624982314 7.2370636878561875e-06 5.140437605463928 0.20761758324545165 ATVTPS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 7 ATVTPSPVK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 ATVT(0.009)PS(0.991)PVK;ATVT(0.016)PS(0.984)PVK;ATVT(0.008)PS(0.992)PVK;ATVT(0.016)PS(0.984)PVK;ATVT(0.073)PS(0.927)PVK;ATVT(0.012)PS(0.988)PVK;ATVT(0.062)PS(0.938)PVK 214.67 7.0227e-09 462801000000.0 299986000.0 327145000.0 219409000.0 205282000.0 219561000.0 325469000.0 248242000.0 330040000.0 300631000.0 329414000.0 True False 283345178.57273513 311428463.1453436 233552455.2068126 224791939.55971593 236839201.56879717 323437627.2444044 273336723.9684486 328895168.2719148 246043988.6907864 326495648.24021393 0.8678375350481501 0.9538518042244015 0.7153309897563478 0.688499037495069 0.7253977284087613 0.9906338077940945 0.8371833604573665 1.0073493170418475 0.7535904077648333 1.0 28.28248852176156 -6.257656721691193 24.947656616931713 0.9131752094025073 0.7894685075664939 0.27568353137478596 0.10325166570610421 488.065922461691 3218934.9274878576 0.03596282148397452 0.03464844761809846 5.525139889877847e-07 6.257656721691193 -0.1237067018360134 ATVTPS(ph)PVKGK ddPTM_KYSE-520_SHP099_60min_R1 10 ATVTPSPVKGK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 ATVT(0.001)PS(0.999)PVKGK;ATVT(0.011)PS(0.989)PVKGK;ATVT(0.443)PS(0.557)PVKGK;ATVT(0.175)PS(0.825)PVKGK;ATVT(0.004)PS(0.996)PVKGK;AT(0.001)VT(0.019)PS(0.98)PVKGK;AT(0.001)VT(0.192)PS(0.806)PVKGK;ATVT(0.013)PS(0.987)PVKGK;ATVT(0.001)PS(0.999)PVKGK;ATVT(0.003)PS(0.997)PVKGK 202.27 2.5694e-07 170458120000.0 95820880.0 96461570.0 80695770.0 58592600.0 64128470.0 82263660.0 64228030.0 75340880.0 96985960.0 77543200.0 True False 90505504.7722113 91827411.38543144 85897548.45199712 64161223.08749246 69175015.74791771 81750221.98378466 70720826.07756642 75079540.07197362 79375754.48109163 76856227.5756968 1.177594940931379 1.1947946741855018 1.117639404918689 0.834821394587695 0.9000573919632765 1.0636772654924769 0.9201704052923032 0.9768829727952326 1.0327823389836994 1.0 26.195658828858395 -5.0634816795444415 6.106173498529907 0.960482898813759 1.1798388919363176 0.6942433490749276 0.06252580018113174 0.11918346126993375 8.827675031268535 0.017615837290031754 0.031407518878001583 8.640091076282357e-06 5.0634816795444415 0.2193559931225586 ATVTPSPVK ddPTM_KYSE-520_SHP099_60min_R1 1 ATVTPSPVK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 0 87.639 0.03902 0.0 549200.0 641120.0 413000.0 393760.0 462510.0 651560.0 470230.0 581410.0 631810.0 596080.0 False True 518734.7811969433 610319.6328592608 439622.6408233644 431182.8320117386 498906.90567807853 647493.3723560903 517765.4374025489 579393.2244121139 517089.23063398496 590799.194943223 0.8780221531053284 1.0330407320848054 0.7441151656708215 0.7298297555283164 0.844461045222014 1.0959618393154982 0.8763814200056708 0.9806939978443856 0.8752368572263851 1.0 19.172308334642068 -6.094904759120879 24.999998160837915 0.9601296560700107 0.8441341922575972 0.2739479301725133 0.09725578850506572 79.89033974038833 21038.519586868028 0.033609554976674214 0.033609558082293385 8.037023549710638e-07 6.094904759120879 -0.11599546381241344 AVAAPRPDR ddPTM_KYSE-520_SHP099_60min_R1 1 AVAAPRPDR 9 1 E9PLT0;O75534-2;O75534;O75534-3;O75534-4 E9PLT0 CSDE1 Cold shock domain-containing protein E1 0 76.827 0.016455 304360000.0 256670.0 263620.0 214000.0 193040.0 241040.0 237660.0 165460.0 249570.0 225350.0 231310.0 False True 242432.00344104026 250955.29949831305 227794.78241210655 211386.46356040775 260008.47667000454 236176.67578449924 182186.31153398502 248704.2999200757 184432.12061121027 229260.7733564571 1.0574508665034659 1.0946281643572975 0.993605574460524 0.9220350279100813 1.1341167215978138 1.030166095694396 0.7946684854400269 1.0848096526892004 0.804464356946285 1.0 17.806630004561352 -6.565763659807242 24.998053489051046 0.9258192526725382 1.0390032361361887 0.2675838005451373 0.09535816550447923 197.76978859964836 115280.4573041102 0.034783013796624726 0.02694282131207309 2.7179179394784185e-07 6.565763659807242 0.11318398346365055 AVAGVMITAS(ph)HNR ddPTM_KYSE-520_SHP099_60min_R1 4 AVAGVMITASHNR 13 0 Q6PCE3 Q6PCE3 PGM2L1 Glucose 1,6-bisphosphate synthase 1 AVAGVMITAS(1)HNR;AVAGVMIT(0.001)AS(0.999)HNR;AVAGVMIT(0.003)AS(0.997)HNR;AVAGVMIT(0.021)AS(0.979)HNR 171.08 1.4445999999999999e-05 1811310000.0 1610750.0 1451450.0 1510150.0 1449650.0 1329420.0 1371070.0 1281510.0 1536640.0 1620190.0 1509770.0 True False 1521398.4865494801 1381720.1633291321 1607496.68532543 1587424.3001468352 1434037.790634908 1362512.643557408 1411057.5371323423 1531309.7544944736 1326004.337666191 1496394.6123832872 1.0167094120489846 0.9233661708581571 1.0742465069191822 1.060832675425479 0.9583286245270127 0.9105303054969923 0.9429715433718184 1.0233328440387643 0.8861327932438102 1.0 20.513059246058038 -5.886683064490284 8.539763609570791 0.9513948715016286 1.0157919207367607 0.27021715465110063 0.052470476870834844 0.3704312321481045 26.31103548771687 0.01657442404032781 0.018819083956557642 1.2981262602725467e-06 5.886683064490284 0.06439704923513212 AVALDSDNIS(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 5 AVALDSDNISLK 12 0 H0Y6F6;A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-5;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 H0Y6F6 NAV1 Neuron navigator 1 1 AVALDSDNIS(1)LK;AVALDSDNIS(1)LK;AVALDSDNIS(1)LK;AVALDSDNIS(1)LK;AVALDSDNIS(1)LK 188.59 9.2034e-08 1849480000.0 3270170.0 3183430.0 2662770.0 2632260.0 2671540.0 2994750.0 2573580.0 3392220.0 3755960.0 3372330.0 True False 3088767.151177721 3030493.24437415 2834416.414782639 2882429.198982176 2881774.9990166994 2976058.65440389 2833742.5821203515 3380453.1805701014 3073972.344046506 3342453.7798330397 0.9241016793752072 0.9066672103766614 0.8480046700673366 0.8623692020435829 0.8621734775822834 0.8903813935618725 0.8478030718683269 1.011368713897058 0.9196753482706514 1.0 21.672476179884626 -7.25846050349903 24.999166908274166 0.9741415248947465 0.8766960785848661 0.6663715561605289 0.03229258138149656 155.6247814020828 1306038.5785344394 0.01579619827130472 0.008605456828389438 5.514923550518814e-08 7.25846050349903 -0.09744544630988039 AVAS(ph)PEATVSQTDENK ddPTM_KYSE-520_SHP099_60min_R1 2 AVASPEATVSQTDENK 16 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 AVAS(1)PEATVSQTDENK;AVAS(1)PEATVSQTDENK 254.68 9.5474e-16 0.0 623080.0 809190.0 534710.0 517250.0 544290.0 771720.0 589740.0 713420.0 764070.0 781090.0 True False 588516.5103208139 770315.2977810474 569178.2621662494 566409.2844831172 587122.526413528 766903.4092250015 649356.6745077504 710945.3125334794 625334.1486372638 774170.1502788254 0.7601901340536747 0.995020665035471 0.7352108085816199 0.7316341043104271 0.7583895170875159 0.9906135091217263 0.8387777212462634 0.9183321163666993 0.8077476875232702 1.0 19.56229115706715 -6.243620265515509 24.707368971984263 0.9014701926774776 0.8001778476694177 0.2867616152067838 0.08993398067612027 1099.1774734325913 1524082.3881061182 0.030030582127277904 0.029968157689473703 5.706630253805704e-07 6.243620265515509 -0.10129234500805995 AVCST(ph)YLQSR ddPTM_KYSE-520_SHP099_60min_R1 2 AVCSTYLQSR 10 0 Q5SQL3;J3KP92;Q86Z02-2;Q86Z02;H7BXX9;Q9H2X6-2;Q9H2X6-3;Q9H2X6 Q5SQL3 HIPK1;HIPK2 Homeodomain-interacting protein kinase 1;Homeodomain-interacting protein kinase 2 1 AVCS(0.001)T(0.689)Y(0.31)LQSR;AVCS(0.011)T(0.66)Y(0.328)LQSR 179.37 2.1663e-06 3764400000.0 5375000.0 4804300.0 4756900.0 4057000.0 4769200.0 4690500.0 4488500.0 4500700.0 5837200.0 4986900.0 True False 5076838.03520315 4573494.216598679 5063537.385309101 4442576.060218469 5144508.906963934 4661224.849647364 4942241.383538575 4485088.12217128 4777311.623837394 4942719.945749494 1.0271344706812675 0.9252990796153985 1.0244435130627831 0.8988120122077471 1.040825489493486 0.9430485442849735 0.9999031783681511 0.907412957116505 0.966534959753416 1.0 22.236873735092896 AVDFAER ddPTM_KYSE-520_SHP099_60min_R1 1 AVDFAER 7 0 E9PKU4;P62917;G3V1A1;E9PKZ0;E9PP36 E9PKU4 RPL8 60S ribosomal protein L8 0 138.33 0.013041 157930000.0 298200.0 304520.0 235510.0 180340.0 307910.0 319690.0 246610.0 280810.0 279240.0 288440.0 False True 281658.2515530379 289890.4021061609 250691.35142932332 197479.45937880193 332140.765231751 317694.69612701546 271539.7454816637 279835.93565154646 228537.05506755871 285884.6460029245 0.9852164342892226 1.0140117916762672 0.8768968705887019 0.6907662308551603 1.1617999423038388 1.111268830169234 0.9498227669032843 0.9788421293834851 0.7994030398723158 1.0 18.125073613712352 AVDGY(ph)VKPQIK ddPTM_KYSE-520_SHP099_60min_R1 1 AVDGYVKPQIK 11 1 K7EM17;K7EK35;P42229-2;P51692;P42229 K7EM17 STAT5A;STAT5B Signal transducer and activator of transcription;Signal transducer and activator of transcription 5A;Signal transducer and activator of transcription 5B 1 AVDGY(1)VKPQIK 58.63 0.046645 329320000.0 2122500.0 1563500.0 1596300.0 951410.0 1506400.0 1335900.0 1051500.0 1449100.0 1750800.0 1463500.0 True False 2004760.69390115 1488387.1131386552 1699200.0521703053 1041831.7203481538 1624945.1097564513 1327562.152573057 1157795.8816510641 1444073.4103224815 1432898.8540763557 1450534.5285857713 1.3820840899635343 1.0260956108296084 1.171430268417654 0.7182398624898018 1.1202388345355179 0.9152227171506157 0.7981856748904014 0.9955456984056842 0.9878419478048482 1.0 20.468153207243102 AVDIPHMDIEALK ddPTM_KYSE-520_SHP099_60min_R1 4 AVDIPHMDIEALK 13 0 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 ;;; 194.7 3.0854e-08 314168000.0 1207700.0 1152250.0 783350.0 775590.0 1138510.0 1178970.0 872660.0 1023040.0 954900.0 990380.0 False True 1140706.4735097382 1096894.180437489 833845.9944043144 849301.8404103643 1228104.259764218 1171611.6109132823 960876.9891408646 1019491.3130193308 781514.2310700885 981606.0037039795 1.1620818018689891 1.1174485244573509 0.8494711638456678 0.8652166319334026 1.251117306872722 1.1935660606112208 0.9788825511611621 1.0385952298298864 0.7961587725840436 1.0 19.90478454728387 -7.640935628758011 7.946708033166168 0.8991992266868054 1.0552618426004197 0.1859629207328941 0.13337509989880303 0.42380239053576024 27.219958439994997 0.09782183790290747 0.03650080237254258 2.285937600537082e-08 7.640935628758011 0.15606261591361426 AVDIPHMDIEALKK ddPTM_KYSE-520_SHP099_60min_R1 3 AVDIPHMDIEALKK 14 1 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 ;; 184.76 2.4837999999999997e-10 3970570000.0 9442400.0 8569230.0 6247560.0 6020620.0 10133040.0 8705280.0 6111630.0 8065210.0 8104900.0 7014330.0 False True 8918611.249042274 8157551.328123548 6650287.714049427 6592817.914634596 10930452.598889098 8650947.11846034 6729453.204160811 8037233.66894417 6633254.467902352 6952188.493266161 1.2828494592286697 1.173378905940898 0.9565747131987068 0.9483082803379614 1.5722319107826628 1.2443487582132713 0.9679618454935321 1.1560724621792082 0.9541246579156009 1.0 22.729035767502637 -6.759143965440077 24.99816783253849 1.0325457748440348 1.1901622727779635 0.19935195865789768 0.1724765338029727 125.96930845876454 1371886.6931119962 0.07359653288872726 0.05420451922255106 1.7412295728604168e-07 6.759143965440077 0.15761649793392873 AVDIT(ph)TPK ddPTM_KYSE-520_SHP099_60min_R1 2 AVDITTPK 8 0 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 AVDIT(0.73)T(0.27)PK;AVDIT(0.744)T(0.256)PK 98.943 0.013696000000000002 1779210000.0 4604700.0 5790900.0 3738340.0 3002010.0 3431820.0 5130400.0 3633940.0 4680100.0 5612500.0 5597700.0 True False 4349268.111758128 5512696.471681891 3979319.3779554875 3287320.127812783 3701884.7096152348 5098379.270574743 4001294.1190366866 4663865.825443556 4593411.47961135 5548108.732944694 0.7839190472119183 0.99361723733846 0.7172388951799504 0.5925118425117845 0.6672336264128038 0.9189400417299942 0.7211996576918156 0.8406226427664439 0.827923838683199 1.0 22.403564631488738 -8.355906747880072 0.8502543806455293 1.0003992531206949 0.769832289981753 0.2740888826704976 0.11032073511378909 1.7863077590484495 2.360287482909808 0.11771258869631619 0.040029209983871446 4.4064947001814805e-09 8.355906747880072 -0.23056696313894187 AVDITT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 AVDITTPK 8 0 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 AVDIT(0.194)T(0.806)PK;AVDIT(0.069)T(0.931)PK;AVDIT(0.044)T(0.956)PK;AVDIT(0.053)T(0.947)PK;AVDIT(0.261)T(0.739)PK;AVDIT(0.02)T(0.98)PK 101.38 0.011734999999999999 5778910000.0 19743500.0 23516400.0 16833600.0 13401120.0 15079300.0 19423900.0 14246060.0 18712400.0 22126500.0 22304200.0 True False 18648288.697308537 22386636.845163982 17918720.790712323 14674758.415606337 16265955.120519426 19302668.235170145 15686190.7729472 18647491.05190699 18108885.363674007 22106602.140405025 0.8435619630220962 1.0126674693370052 0.8105596996275442 0.6638179093468534 0.7357962574804546 0.8731630538503232 0.709570411287992 0.8435258812490368 0.8191618616311799 1.0 24.397973959293275 -4.891923283851518 7.845294245281084 0.7913465479298717 0.9270766961124514 0.18860988211682828 0.0970047575371597 0.3034129931926294 19.972220526564154 0.024336631559159532 0.05108362631105376 1.2825571205393777e-05 4.891923283851518 0.13573014818257967 AVDSNNQSKS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 1 AVDSNNQSKSPLEK 14 1 Q96JN0-3 Q96JN0-3 LCOR Ligand-dependent corepressor 1 AVDSNNQS(0.04)KS(0.96)PLEK 119.23 7.2382e-05 542760000.0 298160.0 315550.0 265490.0 242760.0 254390.0 238390.0 261220.0 257170.0 293220.0 241140.0 True False 281620.4704327759 300390.5043497934 282603.9101990195 265831.8374115443 274409.045718895 236902.11958371932 287626.66686152277 256277.93729392946 239978.63947467966 239003.68720408104 1.1783101496350772 1.2568446447995392 1.1824248968916908 1.11224994275739 1.148137289968175 0.9912069656960262 1.2034402909270743 1.0722760819798494 1.0040792352704004 1.0 17.866673349839527 -4.744443880612417 0.21572976393382162 0.982456446036281 1.3924631837265364 0.5463850636626313 0.06034579784025233 8.030898624636098 0.4122907700514023 0.12334608919072897 0.8908188602782208 1.801175866747407e-05 4.744443880612417 0.4100067376902554 AVEES(ph)S(ph)DEER ddPTM_KYSE-520_SHP099_60min_R1 2 AVEESSDEER 10 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 AVEES(1)S(1)DEER;AVEES(1)S(1)DEER 119.39 0.001341 1302780000.0 694730.0 661830.0 750530.0 561300.0 595050.0 647970.0 592070.0 602730.0 664600.0 647530.0 True False 656191.9419900799 630034.6933729167 798910.364690458 614645.7832390008 641877.0496286353 643925.7788777322 651922.2136463583 600639.2703082399 543925.3932026188 641793.3879707161 1.0224348743524618 0.9816783799612221 1.2448092792238472 0.9577003982269852 1.0001303560608246 1.0033225504453365 1.0157820661064592 0.9358763763637371 0.847508564901945 1.0 19.291749400873304 -6.621572036487487 0.859502729292063 0.9242639722823859 1.0575753515765043 0.2541873348913517 0.08200919494578048 0.8542362159771423 1.2790844570269693 0.06241615867097281 0.0413161073028657 2.390165445380215e-07 6.621572036487487 0.1333113792941184 AVEES(ph)S(ph)DEERQR ddPTM_KYSE-520_SHP099_60min_R1 4 AVEESSDEERQR 12 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 AVEES(1)S(1)DEERQR;AVEES(1)S(1)DEERQR;AVEES(1)S(1)DEERQR;AVEES(1)S(1)DEERQR 151.3 6.006e-05 2169630000.0 2391390.0 2445500.0 2398020.0 1975640.0 2265240.0 2062570.0 1870420.0 1949050.0 2882730.0 2012450.0 True False 2258734.8295822223 2328014.5092296666 2552600.206167663 2163404.231602173 2443501.5005474663 2049696.735558507 2059500.3071400723 1942289.200461692 2359298.899709579 1994621.258662406 1.132412892810002 1.167146143218605 1.2797418031528642 1.084619058483791 1.225045351309491 1.027611997343814 1.0325270014023487 0.9737634109867014 1.1828305195602529 1.0 20.92768340092337 -6.270391632650699 24.609464667933498 1.0410305665280484 1.1776890422607385 0.47434273885225253 0.07074494210725468 462.32055144784886 1270900.7040922742 0.023814847681978963 0.021313073560524965 5.365477368353595e-07 6.270391632650699 0.13665847573269008 AVEFSSGAKS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 4 AVEFSSGAKSPSK 13 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 AVEFSS(0.001)GAKS(0.908)PS(0.091)K;AVEFS(0.001)S(0.045)GAKS(0.477)PS(0.477)K;AVEFSSGAKS(0.774)PS(0.226)K;AVEFSS(0.087)GAKS(0.912)PSK 287.43 6.3059e-30 1414810000.0 1941580.0 2017380.0 1828010.0 1366480.0 1558630.0 1687840.0 1435730.0 1497160.0 2292570.0 1669980.0 True False 1833876.6869562294 1920462.036650887 1945846.4495194147 1496349.8483528083 1681285.3136084052 1677305.56448754 1580867.5997744997 1491966.7013997713 1876297.0789866534 1655185.276424782 1.1079585548981097 1.1602701304829788 1.1756064274100264 0.904037674613044 1.0157686499241945 1.0133642368487823 0.9551000859488014 0.9013895439080001 1.1335873425840735 1.0 20.658561286307386 -5.249232337487203 24.98446916617808 0.9856402126577659 1.1491775596404976 0.5636845395221259 0.06401663477402923 522.4799462329936 1069371.352687604 0.016841677404969772 0.02889305372792688 5.633362033792199e-06 5.249232337487203 0.1635373469827317 AVEHINK ddPTM_KYSE-520_SHP099_60min_R1 7 AVEHINK 7 0 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y6I8 P06733 ENO1 Alpha-enolase;Enolase 0 ;;;;;; 117.18 0.004525100000000001 42253875000.0 78413940.0 76627600.0 52918910.0 47800280.0 72613990.0 73174700.0 55651230.0 68651260.0 63495040.0 63847920.0 False True 74064162.43388605 72946295.07562745 56330147.611849725 52343204.23952175 78328297.89591347 72717989.55452329 61276999.4320649 68413124.80238453 51965941.315702684 63282277.10173016 1.1703776448313221 1.1527128671169937 0.8901409714017645 0.8271384443922083 1.2377604201883554 1.1491051347223906 0.9683121758333434 1.0810787464617655 0.8211768554434954 1.0 25.915298177806495 -4.643901561014233 9.031271636968194 1.0068173034845849 1.165569577975287 0.2096590488165444 0.12689811190439745 0.43400423687684503 31.941994300208243 0.03388884509078865 0.09000749374640782 2.2703794071645192e-05 4.643901561014233 0.15875227449070217 AVEHMFETEDGSKDEWR ddPTM_KYSE-520_SHP099_60min_R1 1 AVEHMFETEDGSKDEWR 17 1 Q9Y657 Q9Y657 SPIN1 Spindlin-1 0 168.07 3.1430000000000004e-08 450720000.0 177750.0 180540.0 99848.0 103900.0 160430.0 185050.0 125960.0 144510.0 134620.0 139440.0 False True 167889.8531641597 171866.5874039352 106284.36184244862 113774.62476132583 173054.92827816505 183895.0343091876 138693.2660511347 144008.7285388875 110176.40149403628 138204.67008267855 1.2147914615600361 1.243565700790856 0.7690359651295853 0.8232328523577541 1.2521641140971427 1.3305992785857061 1.0035353072234379 1.0419961094855676 0.7971973843439961 1.0 17.076446841185312 -7.600301806412838 5.995745718857878 0.8995577968828229 1.0851950336544938 0.1493144915652418 0.18054271551470438 0.4473455758979601 26.355565685140373 0.13787952172453 0.05039594625665469 2.5101414402429344e-08 7.600301806412838 0.18563723677167088 AVFHEEEQR ddPTM_KYSE-520_SHP099_60min_R1 2 AVFHEEEQR 9 0 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 0 ; 168.8 0.00015754 174170000.0 147710.0 137078.0 103895.0 90056.0 134498.0 132345.0 100873.0 119015.0 124895.0 120493.0 False True 139516.23184741527 130492.56712172712 110592.23793787764 98614.8951636763 145082.22741106185 131518.98576411486 111070.22726560895 118602.16474330994 102217.21634673666 119425.52576213537 1.168227905693255 1.0926689774984488 0.9260351774221924 0.8257438645075891 1.2148343202610468 1.1012636111484786 0.930037582474889 0.9931056529701586 0.8559076101563649 1.0 16.865751702619285 -6.775479097952992 24.97176537363577 0.9441881529283745 1.0475274517696944 0.18701274559431502 0.11177452391182535 481.76364495184094 856881.6460220695 0.05001955816260233 0.033913330068356826 1.676953043446525e-07 6.775479097952992 0.10333929884131987 AVFPS(ph)IVGRPR ddPTM_KYSE-520_SHP099_60min_R1 2 AVFPSIVGRPR 11 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;P63267-2;A5A3E0;P0CG38;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;F8WCH0;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;POTEE;ACTG2;POTEF;POTEI;ACTG1;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 1 AVFPS(1)IVGRPR;AVFPS(1)IVGRPR 90.79299999999999 0.004514100000000001 1539460000.0 1332060.0 1290870.0 1435750.0 1069520.0 1282940.0 1214950.0 1139440.0 1215580.0 1524420.0 1278940.0 True False 1258167.976404222 1228854.6675646289 1528300.7422812234 1171166.8592370858 1383900.0790699287 1207367.046387179 1254625.7150627568 1211363.4366985036 1247623.7555009567 1267609.586600265 0.9925516418494708 0.9694267703200502 1.2056557148483968 0.9239176412180354 1.0917399913182697 0.9524754775840275 0.9897571999496068 0.9556281756651794 0.984233449075665 1.0 20.273679044924048 -6.283031423739621 24.71062823554762 0.9744792665637853 1.0360486414179688 0.14683536657602536 0.07251986701416892 1382.7285729180985 1582433.3822551337 0.024717217504695542 0.021820213546897487 5.211570009911538e-07 6.283031423739621 0.06156937485418357 AVFPSIVGR ddPTM_KYSE-520_SHP099_60min_R1 2 AVFPSIVGR 9 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;P63267-2;A5A3E0;P0CG38;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;F8WCH0;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;POTEE;ACTG2;POTEF;POTEI;ACTG1;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ; 192.58 3.2221e-05 2683200000.0 665710.0 813610.0 528920.0 583200.0 896450.0 839900.0 695350.0 737000.0 631750.0 832700.0 False True 628781.7392400154 774522.954346492 563015.029501922 638627.1526545271 966995.5148972194 834657.8725549146 765642.7639620249 734443.5190170925 517040.12512150826 825322.9258307973 0.7618614721105232 0.9384483698509061 0.6821754393108279 0.7737906371759441 1.1716571594370893 1.0113106596605448 0.9276887143190693 0.8898862445603064 0.6264700869675207 1.0 19.654599190570018 AVFPSIVGRPR ddPTM_KYSE-520_SHP099_60min_R1 4 AVFPSIVGRPR 11 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;P63267-2;A5A3E0;P0CG38;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;F8WCH0;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;POTEE;ACTG2;POTEF;POTEI;ACTG1;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member F;POTE ankyrin domain family member I;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ;;; 215.87 1.143e-09 21101390000.0 3786370.0 3828240.0 3264090.0 2691180.0 3997510.0 3567250.0 2652460.0 2872820.0 3011590.0 2626160.0 False True 3576332.5081585343 3644325.6040946054 3474498.4641286507 2946948.938067227 4312091.294279419 3544985.469545804 2920596.542314962 2862854.85794123 2464761.1720058345 2602894.265521562 1.373983014036076 1.4001051261928088 1.3348596253610934 1.1321815784463776 1.6566525007942923 1.3619398669025335 1.1220573117401444 1.0998736659660577 0.9469309624499677 1.0 21.311685277260615 -6.883364214021967 2.8510942499614083 1.0254174228227526 1.3787712826295198 0.6437421892811861 0.12371710855639692 0.18191693990852995 2.9712268255453465 0.060874352214997186 0.03810754121071587 1.3080844590671872e-07 6.883364214021967 0.35335385980676715 AVFVDLEPTVIDEVR ddPTM_KYSE-520_SHP099_60min_R1 7 AVFVDLEPTVIDEVR 15 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VRZ4;F8VS66;F8VWV9;F8VX09;F8VRK0;P68363;P68363-2;Q71U36-2;Q71U36 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1A;TUBA1B Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain 0 ;;;;;; 263.29 3.7853000000000004e-24 897697000.0 555904.0 756786.0 1089478.0 529249.0 774560.0 718420.0 598736.0 588723.0 865543.0 666775.0 False True 525066.8969528496 720428.8646010554 1159707.4951064328 579548.6658354859 835513.4653564508 713936.0742956325 659262.0779802491 586680.8573219809 708382.2097634285 660867.8922431008 0.7945111316736557 1.0901253836917304 1.7548249941000817 0.8769508590716925 1.2642669967224047 1.0803007419113813 0.9975701433195653 0.8877430182463303 1.0718968466739334 1.0 19.334002379673407 -6.596449817848304 3.265837565714806 0.9794213902136792 1.1709772092124466 0.09024117997670467 0.2454782354798181 0.5926478432960072 12.761972024019157 0.10203878028142498 0.07754804473204928 2.5325042458837177e-07 6.596449817848304 0.1915558189987674 AVGMPS(ph)PVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 AVGMPSPVSPK 11 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 2 AVGMPS(1)PVS(1)PK;AVGMPS(1)PVS(1)PK;AVGMPS(1)PVS(1)PK;AVGMPS(1)PVS(1)PK;AVGMPS(1)PVS(1)PK 158.58 2.4359000000000002e-05 5258610000.0 12715400.0 11722500.0 10391000.0 11397200.0 12017700.0 11678800.0 11430200.0 12579400.0 14109200.0 11650900.0 True False 12010051.414478537 11159333.504168775 11060820.486187845 12480386.461306864 12963424.618640542 11605908.277169112 12585676.164001917 12535764.997454029 11547324.943987958 11547682.090263052 1.0400400115452912 0.9663699967613647 0.9578390190975447 1.0807698344787535 1.1225997145843871 1.0050422402046517 1.089887655862478 1.085565475345405 0.9999690720378079 1.0 23.46109995979431 -5.2651342623298705 24.990460884732688 1.0606082119163156 0.9859117069405713 0.3100833181590892 0.0450193911491304 335.3489092142988 2268145.39162056 0.012358191651262125 0.01914997797919286 5.430824113714238e-06 5.2651342623298705 -0.07469650497574432 AVGMPS(ph)PVSPK ddPTM_KYSE-520_SHP099_60min_R1 1 AVGMPSPVSPK 11 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 AVGMPS(0.996)PVS(0.004)PK 95.273 0.0022733000000000002 368440000.0 897550.0 1095000.0 717450.0 644390.0 795500.0 1072100.0 686590.0 848020.0 993480.0 997140.0 True False 847761.112278433 1042394.5563714923 763697.974960587 705632.631857082 858101.3242241484 1065408.626224697 755997.2176726626 845078.4165493553 813089.0755927447 988306.115363181 0.8577920333589146 1.054728428942722 0.7727342400182807 0.7139818532821457 0.8682545932732743 1.0780148070147098 0.7649423654480273 0.8550775953043732 0.8227097484810687 1.0 19.91459844207116 -6.007770797433708 24.888758289868612 0.8960290434369611 0.8504630591019947 0.045078323750898264 0.11602248887833727 1651.3061837804398 5288917.151880384 0.038839075985561265 0.04214268365885554 9.82266205502452e-07 6.007770797433708 -0.04556598433496639 AVGMPSPVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 AVGMPSPVSPK 11 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 AVGMPS(0.02)PVS(0.98)PK;AVGMPSPVS(1)PK;AVGMPSPVS(1)PK 168.61 1.411e-05 4442800000.0 4870050.0 5169320.0 3841170.0 3049660.0 3377040.0 4609060.0 3600230.0 4647730.0 5340200.0 4897720.0 True False 4599898.618296015 4920978.107892486 4088777.964289301 3339498.7694862853 3642793.835270795 4580293.146896004 3964176.383258789 4631608.109418332 4370554.295486954 4854330.0111684995 0.947586712834293 1.0137296180050899 0.8422950139117302 0.6879422622283616 0.7504215467200854 0.9435479533443315 0.8166268824200852 0.954118920378766 0.9003414035369436 1.0 22.210840759661668 -7.27422175449718 23.778697564498184 0.9454226419191702 0.8555533220264733 0.17458443914692479 0.09335779780126892 894.2162099404305 1663470.1736243807 0.056363057574816314 0.027400690624428858 5.3183662956787334e-08 7.27422175449718 -0.08986931989269697 AVGPAS(ph)ILK ddPTM_KYSE-520_SHP099_60min_R1 1 AVGPASILK 9 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 AVGPAS(1)ILK 122.69 0.0007160000000000001 296820000.0 259600.0 355560.0 277920.0 211260.0 271260.0 302940.0 239950.0 367480.0 368740.0 393820.0 True False 245199.47050022986 338478.3638935595 295835.1678877221 231338.08688236467 292606.6187417256 301049.23909011297 264206.487686327 366205.2976504768 301786.1111789553 390331.0611873239 0.6281833419927504 0.8671571328809015 0.7579083432095807 0.5926714778441451 0.7496370333728083 0.7712664172161189 0.6768779478698254 0.9381915355046037 0.7731542303114971 1.0 18.57433874643193 -7.977209723758184 0.7020708123677446 0.9947887271861111 0.7209986936686149 0.45605448671611604 0.09066670515102865 0.6816130331379493 0.7797159457932833 0.08825652874334503 0.03534248382527794 1.0538778487111455e-08 7.977209723758184 -0.2737900335174962 AVGS(ph)PLCVPAR ddPTM_KYSE-520_SHP099_60min_R1 5 AVGSPLCVPAR 11 0 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 AVGS(1)PLCVPAR;AVGS(1)PLCVPAR;AVGS(1)PLCVPAR;AVGS(1)PLCVPAR;AVGS(1)PLCVPAR 153.74 4.2242e-05 3449930000.0 2409720.0 2566050.0 2299700.0 1730680.0 1936740.0 2100370.0 1788100.0 1969150.0 2465990.0 2299730.0 True False 2276048.0279422714 2442773.1062804256 2447942.3416500986 1895163.3068520867 2089150.4194567907 2087260.8117373092 1968858.598174293 1962319.4782530637 2018228.378549094 2279356.1813628674 0.9985486456887936 1.071694334678246 1.0739621835611626 0.8314467577940956 0.916552856696425 0.9157238472880088 0.8637783836824825 0.8609095385345866 0.885437912271508 1.0 21.120194952871998 -5.253502031899259 24.95665724283985 0.8907713541602637 1.0504309932067972 0.6856344934990797 0.04699366277033656 302.2804338451631 950429.7607553018 0.012251069706824668 0.020741156223818905 5.578249922834029e-06 5.253502031899259 0.15965963904653357 AVHHLHYIER ddPTM_KYSE-520_SHP099_60min_R1 2 AVHHLHYIER 10 0 P82675 P82675 MRPS5 28S ribosomal protein S5, mitochondrial 0 ; 161.76 8.0615e-05 74960000.0 77131.0 87234.0 66045.0 77956.0 90912.0 74950.0 78283.0 69089.0 91140.0 42016.0 False True 72852.38967316352 83043.14769909644 70302.36637573635 85364.91480167402 98066.25718147805 74482.20924870916 86196.60960845502 68849.34638449374 74591.2734524327 41643.770927953345 1.7494186537334306 1.9941313154076976 1.68818444653738 2.049884362042077 2.3548841758624497 1.7885558293356436 2.069856011780999 1.6532927938636477 1.7911748093485782 1.0 15.34581309306515 -8.473002243924034 0.8776443303936604 0.9973812614807861 1.9574495507166947 0.671456749668243 0.19485811158977634 0.9469760282788041 1.1733199202027371 0.19726719045919805 0.06459816427441392 3.365098306832463e-09 8.473002243924034 0.9600682892359086 AVHS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 10 AVHSPIR 7 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 AVHS(1)PIR;AVHS(1)PIR;AVHS(1)PIR;AVHS(1)PIR;AVHS(1)PIR;AVHS(1)PIR;AVHS(1)PIR;AVHS(1)PIR;AVHS(1)PIR;AVHS(1)PIR 133.13 0.0012652000000000002 15062180000.0 7171620.0 6890370.0 6777770.0 5924920.0 6625220.0 6330620.0 6225990.0 6404270.0 7944680.0 6640780.0 True False 6773795.942329971 6559346.282543773 7214675.899015436 6488022.615407851 7146587.121654695 6291108.252355743 6855373.8290068675 6382055.082137849 6502126.381084837 6581947.855648658 1.029147615704167 0.9965661269884585 1.0961308198185993 0.9857298717187192 1.085786043643822 0.9558125330568648 1.041541801812294 0.9696301493274122 0.9878726668283587 1.0 22.650083166328052 -6.2717699058645255 24.93625633478836 0.9922339656716544 1.0365837931532396 0.2799045620949624 0.03815441283794631 964.9470316823201 2329221.8768951786 0.012559303291720171 0.011203730788769036 5.348476526886025e-07 6.2717699058645255 0.04434982748158511 AVIVS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 AVIVSSPK 8 0 Q14966;Q14966-3;Q14966-5 Q14966 ZNF638 Zinc finger protein 638 1 AVIVS(0.647)S(0.353)PK 73.985 0.023737 1185200000.0 6625300.0 6624900.0 5775700.0 4469600.0 5729900.0 5450500.0 4970700.0 6170700.0 7480000.0 6732100.0 True False 6257781.401791893 6306629.859822366 6148010.863446747 4894389.440165758 6180810.5313286595 5416481.407739684 5473186.865357067 6149295.281952212 6121820.555455298 6672458.831494548 0.9378523809325965 0.9451732890511906 0.9214010934661201 0.7335211147446639 0.9263167727846788 0.8117669279836469 0.8202653629758164 0.9215935889970632 0.9174759575225564 1.0 22.669787068412752 -8.008727987670264 1.6340897676237662 0.9976378653820288 0.8716834661572312 0.257099237662756 0.06497953681956192 0.5759853226385647 3.485717544684295 0.06434846374276777 0.018688078148149802 9.801036630380901e-09 8.008727987670264 -0.12595439922479756 AVIVSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 AVIVSSPK 8 0 Q14966;Q14966-3;Q14966-5 Q14966 ZNF638 Zinc finger protein 638 1 AVIVS(0.391)S(0.609)PK;AVIVS(0.027)S(0.973)PK;AVIVS(0.281)S(0.719)PK;AVIVS(0.019)S(0.981)PK;AVIVS(0.212)S(0.788)PK;AVIVS(0.001)S(0.999)PK;AVIVS(0.055)S(0.945)PK 196.07 3.8985e-06 42898900000.0 63293600.0 63782700.0 57139700.0 45799500.0 46989800.0 49570300.0 47341100.0 58897500.0 63712600.0 58892800.0 True False 59782577.83533655 60718483.35221551 60823016.48875255 50152270.70987821 50687629.9246108 49260913.3705309 52126800.39261173 58693198.319279894 52143997.90394398 58371055.60990508 1.024181886222252 1.0402156123061803 1.042006450855266 0.8591975969228111 0.8683692524486321 0.8439270603523528 0.8930248022406202 1.0055188775671233 0.8933194261968355 1.0 25.798749823050233 -5.250730342971708 24.713551361911094 0.904204626857169 1.0359427616642338 0.5545876324194401 0.05178932884983242 466.9534544410967 1077599.1501158169 0.014730245108466516 0.025180627113486533 5.613964435234112e-06 5.250730342971708 0.13173813480706487 AVLFCLS(ph)EDKK ddPTM_KYSE-520_SHP099_60min_R1 2 AVLFCLSEDKK 11 1 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 1 AVLFCLS(1)EDKK;AVLFCLS(1)EDKK 176.89 4.386499999999999e-06 1773150000.0 1482470.0 1398890.0 1277450.0 1344080.0 1564100.0 1188340.0 1253220.0 1202980.0 1506490.0 1123280.0 True False 1400234.4338693225 1331685.224623303 1359796.4709922676 1471820.9590876137 1687185.771488363 1180923.1292676588 1379907.707848549 1198807.1431576435 1232949.391522441 1113328.6130986167 1.2577009315984338 1.1961295245228234 1.2213792540619983 1.3220004783594315 1.5154427467669107 1.0607138946882115 1.239443315849028 1.0767774483232968 1.1074442684904107 1.0 20.086448054649363 -7.137889450580014 1.1101458148491719 1.0381405750914312 1.280545731695109 0.439553405712671 0.10663588979347854 0.5284980157858625 1.173765124640401 0.09216490297857213 0.038867184733962105 7.279650840636426e-08 7.137889450580014 0.24240515660367778 AVLFCLSEDKK ddPTM_KYSE-520_SHP099_60min_R1 4 AVLFCLSEDKK 11 1 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 0 ;;; 147.74 0.000178 9169590000.0 2348810.0 2431660.0 1745940.0 1576570.0 2662620.0 2463750.0 1763490.0 2212950.0 1954790.0 1941820.0 False True 2218516.827063347 2314839.403603928 1858486.086002771 1726406.738786945 2872153.0457645543 2448372.822368343 1941760.779203841 2205273.792956415 1599849.4122457828 1924616.9855131004 1.1527056259829762 1.2027532859930543 0.9656394492992075 0.897013146918002 1.492324481901443 1.2721351005408539 1.0089076391925171 1.1458247586693162 0.8312559975767152 1.0 20.87613993560939 -7.7483760113639155 24.672998804026893 0.915628028504787 1.1416894932202926 0.23549079329998135 0.16326562565484198 262.60837224243835 495999.8057233424 0.11808541227916651 0.044004746923944175 1.7849415065825835e-08 7.7483760113639155 0.2260614647155056 AVLPVTCHRDS(ph)FSR ddPTM_KYSE-520_SHP099_60min_R1 2 AVLPVTCHRDSFSR 14 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 AVLPVTCHRDS(0.972)FS(0.028)R;AVLPVTCHRDS(0.926)FS(0.074)R 206.8 3.3385e-12 1930130000.0 346410.0 405100.0 330710.0 378780.0 341880.0 370160.0 275410.0 315880.0 415170.0 415830.0 True False 327193.94674878573 385638.38793250325 352028.0957547091 414779.1373156399 368784.0109688903 367849.69413612015 303251.1305425772 314784.2860069465 339785.5935840075 412146.069710845 0.7938786046858088 0.9356837691138505 0.854134302437207 1.0063886757591602 0.8947895857107727 0.8925226301301321 0.7357855693136496 0.7637687439984423 0.824430022643175 1.0 18.65279621160176 -6.612041643555047 10.523947161383353 0.8113767764643617 0.9019070863335091 0.10934411942706124 0.0835410747428404 0.595731741559933 65.82328854232814 0.03061259119859036 0.02369733860842373 2.4431962686754615e-07 6.612041643555047 0.09053030986914745 AVLPVTCHRDSFS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 AVLPVTCHRDSFSR 14 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 AVLPVTCHRDS(0.267)FS(0.733)R 133.71 6.769099999999999e-06 1559600000.0 348090.0 341710.0 303660.0 334030.0 357250.0 314950.0 260030.0 260750.0 342920.0 263800.0 True False 328780.75379978865 325293.73868283303 323234.40947317897 365776.1107702183 385363.54252555256 312984.28022522957 286316.37004824204 259845.51910950753 280654.3723097232 261462.93723329465 1.2574659998806201 1.2441294438323558 1.2362532636308896 1.3989596944053624 1.4738744489116846 1.197050272352613 1.09505528040776 0.9938139678957865 1.0734002122040904 1.0 17.996246931198534 -6.68204849351792 2.812215061283296 1.0321788490891115 1.318090114680028 0.761161764643365 0.07421786059185352 0.1431204751963785 2.2943471188700757 0.03572143045732553 0.02551355641361447 2.0794644801971002e-07 6.68204849351792 0.2859112655909164 AVLS(ph)PGSVFSPGR ddPTM_KYSE-520_SHP099_60min_R1 1 AVLSPGSVFSPGR 13 0 P27987-2;P27987 P27987-2 ITPKB Inositol-trisphosphate 3-kinase B 1 AVLS(0.878)PGS(0.122)VFSPGR 136.33 1.4427000000000001e-05 239640000.0 66256.0 101990.0 80810.0 80130.0 75332.0 122230.0 112550.0 158000.0 179140.0 132760.0 True False 62580.64760193848 97090.247309889 86019.14190057153 87745.53110803703 81260.19981955193 121467.11723108364 123927.65238214692 157451.93487747715 146612.69175190688 131583.84968571708 0.47559520223348023 0.7378583887140048 0.6537211223567703 0.6668411915110694 0.6175545100226111 0.9231156978702412 0.9418150683244433 1.1965901229789597 1.114214944327025 1.0 17.005622901137926 -6.5587306789656985 1.5457773912667847 1.1072909135881397 0.6325811992637118 0.8488159942240745 0.0871248368339114 0.13674985489770408 0.6636003326159325 0.042945157251632685 0.030746368185438903 2.7622903169849086e-07 6.5587306789656985 -0.4747097143244279 AVLSAEQLRDEEVHAGLGELLR ddPTM_KYSE-520_SHP099_60min_R1 2 AVLSAEQLRDEEVHAGLGELLR 22 1 P50454;E9PR70;E9PPV6;E9PK86;E9PMI5;E9PNX1;E9PQ34;E9PIG2;E9PRS3;E9PJH8 P50454 SERPINH1 Serpin H1 0 ; 206.92 5.6571e-15 1473680000.0 883840.0 821990.0 698050.0 518530.0 966920.0 712820.0 476810.0 527020.0 746890.0 540310.0 False True 834811.6333086415 782500.3665678555 743047.4199194895 567810.9352982705 1043011.1029777683 708371.0259728467 525010.6080171611 525191.890627393 611273.6035647071 535523.2737548194 1.558870873072169 1.4611883458983157 1.3875165774021647 1.060291798929795 1.9476485039850833 1.3227642208827002 0.9803693578731906 0.9807078727783614 1.1414510508175761 1.0 19.030589750067854 -6.634901511209217 4.794490182756291 1.0265970261765431 1.4687620976955094 0.5167409767180616 0.20794675173422195 0.18220171144149858 6.884073699606098 0.08221594090471566 0.06267370450857164 2.317920245590835e-07 6.634901511209217 0.4421650715189662 AVLSDS(ph)PQLSEGK ddPTM_KYSE-520_SHP099_60min_R1 5 AVLSDSPQLSEGK 13 0 Q5VY60;Q7Z4H7-3;Q7Z4H7;Q5SYF9;Q7Z4H7-2 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 AVLS(0.001)DS(0.999)PQLSEGK;AVLSDS(1)PQLSEGK;AVLSDS(1)PQLSEGK;AVLSDS(1)PQLSEGK;AVLSDS(1)PQLSEGK 295.49 2.2787999999999997e-30 2966290000.0 4715070.0 4597630.0 3903110.0 2988920.0 3649960.0 4114110.0 3511520.0 4159440.0 5075850.0 4012610.0 True False 4453515.667840982 4376752.953616677 4154710.71579681 3272986.05814843 3937191.0865684147 4088432.3134383797 3866498.7107326174 4145011.8734605922 4154203.591765749 3977061.397163339 1.1198005821628694 1.1004992170194858 1.0446684878338013 0.8229659367297939 0.9899749320884605 1.0280033183180115 0.9721999045552626 1.0422297921819976 1.0445409755878443 1.0 21.923271403707517 -5.001879669000601 15.445116384765628 0.9846077420571474 1.1007691885425308 0.4097753019091708 0.059754074249812966 0.5771735089555151 4767.235509702873 0.016776461602687795 0.03332479922483942 9.956812548968007e-06 5.001879669000601 0.1161614464853834 AVLT(ph)SQK ddPTM_KYSE-520_SHP099_60min_R1 1 AVLTSQK 7 0 P38398;P38398-4;P38398-8;E7EUM2;P38398-5;H0Y8B8;B7ZA85;H0Y881 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 AVLT(0.613)S(0.387)QK 89.24700000000001 0.036213 574010000.0 1632900.0 1554500.0 1396900.0 1503200.0 1540900.0 1610300.0 1460000.0 1604700.0 1727600.0 1543700.0 True False 1542319.7818945502 1479819.486647931 1486946.409119024 1646063.676046442 1662160.0634783024 1600249.5203895445 1607591.0482268713 1599133.670239797 1413911.38925195 1530024.0189804272 1.0080363201894809 0.9671870952941305 0.971845141431107 1.075841722500109 1.0863620720058549 1.04589829998611 1.0506966088663974 1.0451689976118304 0.9241105836979919 1.0 20.545122870472138 -5.241952349971403 24.73900246154319 1.0380150357980358 0.9808392688498355 0.20706986498760072 0.04412342454091802 1048.7848973797609 1331441.7124716216 0.01228983665311178 0.021243708049550444 5.728588806092061e-06 5.241952349971403 -0.05717576694820026 AVLTS(ph)QK ddPTM_KYSE-520_SHP099_60min_R1 1 AVLTSQK 7 0 P38398;P38398-4;P38398-8;E7EUM2;P38398-5;H0Y8B8;B7ZA85;H0Y881 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 AVLT(0.198)S(0.802)QK 111.61 0.0029361 334420000.0 1822900.0 1588100.0 1444300.0 1394100.0 1631800.0 1607900.0 1596100.0 1626300.0 1750700.0 1582400.0 True False 1721780.103138941 1511805.292213302 1537401.8889617075 1526594.844848552 1760213.3763280546 1597864.499679778 1757449.3644348716 1620658.7448812716 1432817.0115555609 1568381.1670885708 1.0978071780440524 0.9639272161241951 0.9802476089505902 0.9733570364673609 1.1223122371429564 1.018798576015764 1.1205499028640298 1.0333321891959115 0.9135642799226789 1.0 20.5808447927061 -4.226879271089322 22.379890537762645 1.019589527607684 1.0978078327508187 0.13308152227585102 0.06272405145126675 8929.926922365203 5782288.58072515 0.0161469830950769 2.277017484544039 5.930901739670301e-05 4.226879271089322 0.07821830514313466 AVLVDLEPGTMDSVR ddPTM_KYSE-520_SHP099_60min_R1 2 AVLVDLEPGTMDSVR 15 0 P04350;M0R278;M0QZL7;M0QY85;M0QY37;M0QX14;M0R0X0;A0A075B724;P68371;Q3ZCM7 P04350;P68371 TUBB4A;TUBB8;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain;Tubulin beta-8 chain 0 ; 130.56 0.0033269 122030000.0 227550.0 297530.0 278900.0 197975.0 249050.0 238690.0 209190.0 222740.0 281450.0 255790.0 False True 214927.34789032128 283236.21219836525 296878.3402557776 216790.48447664594 268648.8180993389 237200.24717244031 230336.96669765725 221967.36692790658 230345.77477712464 253523.89960160846 0.8477597111280695 1.1171972845299682 1.1710073122190727 0.8551086695073482 1.0596587482343796 0.9356129640841775 0.9085414316346998 0.8755283713950033 0.9085761742348303 1.0 17.951762230389168 -6.218818122669387 1.2780663088205586 0.9110857382448664 1.026914457728209 0.1261582507929353 0.1010122212582554 0.780793024551263 2.6040073885718362 0.04848137346713412 0.04533932797222526 6.042016088019122e-07 6.218818122669387 0.11582871948334261 AVLWQDSFS(ph)PHLK ddPTM_KYSE-520_SHP099_60min_R1 1 AVLWQDSFSPHLK 13 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4;E9PM68;E9PL65;E9PMX1 Q5T1Z4 PUM1 Pumilio homolog 1 1 AVLWQDSFS(1)PHLK 143.67 6.6679999999999995e-06 163230000.0 119760.0 119940.0 109130.0 159130.0 102010.0 94006.0 81809.0 97481.0 122450.0 103250.0 True False 113116.67406435886 114177.90236638958 116164.69441417363 174253.66735582074 110037.60664249588 93419.27368424495 90079.05209889865 97142.86116323646 100216.1667133024 102335.28532728452 1.1053535806598256 1.1157236919917748 1.1351382276666397 1.7027720868567453 1.07526554785652 0.9128745123001832 0.8802345330919977 0.9492606665683115 0.979292395509478 1.0 16.642944148253797 -5.993865372219751 24.99880763577964 0.9434789341339737 1.2628663883051903 0.46204972124037014 0.16301530987040905 151.992639611059 619368.8081819596 0.0530836479762197 0.06003464993635922 1.0142257387946943e-06 5.993865372219751 0.3193874541712166 AVNTQALS(ph)GAGILR ddPTM_KYSE-520_SHP099_60min_R1 4 AVNTQALSGAGILR 14 0 O60749;O60749-2 O60749 SNX2 Sorting nexin-2 1 AVNTQALS(1)GAGILR;AVNTQALS(1)GAGILR;AVNT(0.001)QALS(0.999)GAGILR;AVNTQALS(1)GAGILR 179.66 6.676e-09 2020730000.0 1418140.0 1505120.0 1355770.0 1015640.0 1128450.0 1436090.0 1022930.0 1508210.0 1671990.0 1354120.0 True False 1339472.9472079976 1432811.77596882 1443165.103508699 1112166.1202367002 1217252.5949977883 1427126.829619462 1126337.7472347368 1502978.3715288606 1368398.7634379298 1342123.5502894178 0.9980250677511405 1.067570698435212 1.0752848373739454 0.8286615043725823 0.9069601637906569 1.0633349137728145 0.8392206119860213 1.119850978849716 1.0195773430418131 1.0 20.356086055456405 -9.612603249609052 10.968565259044384 0.9999997914050609 0.9898968270626243 0.0006939565422544591 0.0959850088598593 0.0 0.0 0.09447386380250064 0.022913277606936892 2.4400389017654996e-10 9.612603249609052 -0.010102964342436627 AVPAPS(ph)PGPT(ph)HNSPELGRPPAAGVLAPDMSDKDK ddPTM_KYSE-520_SHP099_60min_R1 1 AVPAPSPGPTHNSPELGRPPAAGVLAPDMSDKDK 34 2 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 2 AVPAPS(0.988)PGPT(0.555)HNS(0.457)PELGRPPAAGVLAPDMSDKDK 79.359 0.033059 2276600000.0 96684.0 132080.0 89510.0 73162.0 59643.0 75763.0 95905.0 93252.0 110870.0 89190.0 True False 91320.7457852244 125734.67854387811 95279.95782106376 80115.29448304264 64336.56477775099 75290.13501414208 105600.0133426015 92928.53057718031 90738.80280525789 88399.84598876993 1.0330419104669655 1.422340470591443 1.0778294549649765 0.9062831907333896 0.7277904622811687 0.8516998437271796 1.1945723678751277 1.0512295529223625 1.0264588336136367 1.0 16.431756235688425 -4.994389011264409 24.636413415134413 0.964750282514103 1.2332897327422487 0.3390938238838904 0.146128530320189 140.95634053077035 618883.8132719089 0.04071482474559172 0.08433236560598566 1.0130035999581686e-05 4.994389011264409 0.26853945022814574 AVPAPS(ph)PGPTHNS(ph)PELGRPPAAGVLAPDMSDKDK ddPTM_KYSE-520_SHP099_60min_R1 2 AVPAPSPGPTHNSPELGRPPAAGVLAPDMSDKDK 34 2 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 2 AVPAPS(0.989)PGPT(0.094)HNS(0.917)PELGRPPAAGVLAPDMSDKDK;AVPAPS(0.947)PGPT(0.066)HNS(0.987)PELGRPPAAGVLAPDMSDKDK 174.02 1.2558e-10 6955400000.0 1476180.0 1586780.0 1403880.0 1348110.0 1286780.0 1177730.0 1309010.0 1602200.0 1746500.0 1387500.0 True False 1394293.3527081273 1510548.7069946635 1494376.3510874195 1476233.9690759485 1388042.265223318 1170379.3502132392 1441337.5055064769 1596642.3421562905 1429379.6256821754 1375207.829458667 1.0138782828606883 1.0984148538401441 1.0866549179520464 1.0734624523313316 1.0093327244724188 0.8510563459153255 1.0480870415592682 1.1610189441582721 1.039391715974183 1.0 20.391218232959183 -5.75578062854642 24.089455657958496 1.0193411314884968 1.0715929659314798 0.0983605147732659 0.07373990104386326 241.9667718977071 1030050.9493009964 0.024469235696982138 0.03067873217922442 1.7547666482713466e-06 5.75578062854642 0.05225183444298298 AVPAPSPGPTHNS(ph)PELGRPPAAGVLAPDMSDKDK ddPTM_KYSE-520_SHP099_60min_R1 7 AVPAPSPGPTHNSPELGRPPAAGVLAPDMSDKDK 34 2 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 AVPAPS(0.023)PGPT(0.038)HNS(0.939)PELGRPPAAGVLAPDMSDKDK;AVPAPS(0.003)PGPT(0.047)HNS(0.951)PELGRPPAAGVLAPDMSDKDK;AVPAPSPGPTHNS(1)PELGRPPAAGVLAPDMSDKDK;AVPAPS(0.014)PGPT(0.365)HNS(0.621)PELGRPPAAGVLAPDMSDKDK;AVPAPSPGPTHNS(1)PELGRPPAAGVLAPDMSDKDK;AVPAPS(0.219)PGPT(0.219)HNS(0.555)PELGRPPAAGVLAPDMS(0.008)DKDK;AVPAPS(0.165)PGPT(0.135)HNS(0.7)PELGRPPAAGVLAPDMSDKDK 262.01 1.1998e-41 25672500000.0 9071080.0 8760290.0 7304440.0 8807690.0 6850670.0 8811230.0 7056386.0 8262150.0 9595320.0 8299130.0 True False 8567889.109650334 8339432.518936622 7775295.8899172265 9644770.209471446 7389778.754019668 8756235.845210185 7769714.360570834 8233490.53005031 7853051.76633306 8225606.164825439 1.0416118809928652 1.0138380505740634 0.945255064990366 1.172530025898234 0.8983871347524565 1.0645094926443037 0.9445765096067811 1.0009585147971936 0.954707970327402 1.0 22.97169056777867 AVPETEDVQASVSDTAQQPSEEQS(ph)KSLEKPK ddPTM_KYSE-520_SHP099_60min_R1 1 AVPETEDVQASVSDTAQQPSEEQSKSLEKPK 31 2 H0YME2;H0YK21;H0YK54;Q6FIF0-2;Q6FIF0 H0YME2 ZFAND6 AN1-type zinc finger protein 6 1 AVPETEDVQASVSDTAQQPS(0.142)EEQS(0.485)KS(0.373)LEKPK 114.61 0.00017822 2029400000.0 108500.0 120660.0 93981.0 71106.0 68726.0 91712.0 64084.0 80976.0 120000.0 100900.0 True False 102481.28871061238 114863.3124856477 100039.16563491673 77863.89286120163 74134.34520255038 91139.59138916088 70562.23611956912 80695.11315594052 98211.02495382825 100006.10449901222 1.024750331232276 1.1485630108388256 1.00033059117811 0.7785913995077242 0.7412981994842387 0.9113402811331491 0.7055792891149567 0.8069018742424625 0.982050300287402 1.0 16.609728541053347 -5.085925620212755 4.210016688243455 0.8317928251289739 1.0854913829793484 0.5094601524560948 0.09645967321494468 0.1589218768894719 5.063377324517838 0.02587169515817014 0.048225828096668866 8.204920545165361e-06 5.085925620212755 0.25369855785037454 AVPIAVADEGES(ph)ES(ph)EDDDLKPR ddPTM_KYSE-520_SHP099_60min_R1 3 AVPIAVADEGESESEDDDLKPR 22 1 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 2 AVPIAVADEGES(1)ES(1)EDDDLKPR;AVPIAVADEGES(1)ES(1)EDDDLKPR;AVPIAVADEGES(1)ES(1)EDDDLKPR 176.44 4.1466000000000004e-10 1201700000.0 2065830.0 1944310.0 1721170.0 1771020.0 1805190.0 1742540.0 1665350.0 1818150.0 2275900.0 1766450.0 True False 1951234.2917699907 1850902.429131192 1832119.372169371 1939337.2083234193 1947248.1828739033 1731664.161497605 1833699.8302497414 1811843.2620094013 1862653.9307701497 1750800.6272773058 1.1144811472933855 1.0571748720524254 1.0464466048418803 1.10768592271943 1.1122044123905164 0.9890698772426989 1.0473493107558187 1.0348655545246312 1.0638869450639783 1.0 20.73958337530302 -6.252302625574386 24.99838338116021 1.0304831197736524 1.0847381260783275 0.5175263084077668 0.029078150395744705 640.282774388991 1751830.6447789373 0.009909835928174664 0.009794289525813085 5.593676864334664e-07 6.252302625574386 0.05425500630467517 AVPIAVADEGES(ph)ESEDDDLKPR ddPTM_KYSE-520_SHP099_60min_R1 2 AVPIAVADEGESESEDDDLKPR 22 1 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 AVPIAVADEGES(0.989)ES(0.011)EDDDLKPR;AVPIAVADEGES(0.989)ES(0.011)EDDDLKPR 113.13 0.00011632 682320000.0 960150.0 1020170.0 912380.0 861390.0 964830.0 958910.0 877940.0 988410.0 1256090.0 970110.0 True False 906888.5654884282 971159.5018936107 971193.4746596157 943256.2466136534 1040756.6318682415 952925.0870003954 966690.7430686977 984981.4364066293 1028015.7194521189 961515.5801341601 0.9431865527981255 1.0100299173083653 1.0100652498258065 0.9810098412363125 1.082412654949413 0.991065674533775 1.005382297532626 1.024405071282563 1.0691617907103284 1.0 19.87495070922526 -2.789929250186115 0.8994878128277425 1.0233730369114344 9.103578661340142e-09 0.3644830371779375 0.030572713287024447 29.084432940908425 2.1542210858250614 0.01005971319605737 51.72615555289899 0.0016220743238551459 2.789929250186115 -1.0233730278078559 AVPIGT(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 10 AVPIGTPPK 9 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 AVPIGT(1)PPK;AVPIGT(1)PPK;AVPIGT(1)PPK;AVPIGT(1)PPK;AVPIGT(1)PPK;AVPIGT(1)PPK;AVPIGT(1)PPK;AVPIGT(1)PPK;AVPIGT(1)PPK;AVPIGT(1)PPK 119.53 0.0036560000000000004 37876090000.0 57150800.0 69532200.0 51427730.0 46379700.0 52465420.0 73821500.0 52930830.0 61427300.0 68414700.0 70517600.0 True False 53980531.196704775 66191768.74203997 54742843.76307732 50787612.74343476 56594150.066594824 73360752.63580504 58281594.851519406 61214223.033539675 55992315.07423894 69892868.92586264 0.7723324571776194 0.9470460972528036 0.783239329052934 0.7266494210919662 0.8097271000082406 1.0496171320942753 0.8338704040513827 0.8758293081154152 0.801116278881492 1.0 26.058641931112536 -6.092599793296976 24.999998905394577 0.9027971141307518 0.8096126134935037 0.2636744608751359 0.08641642825221507 95.31580226594467 25728.034313485703 0.028916415036563062 0.028916425619281278 8.079792482417707e-07 6.092599793296976 -0.09318450063724815 AVPIGT(ph)PPKQMAVPSFTQQILCPK ddPTM_KYSE-520_SHP099_60min_R1 1 AVPIGTPPKQMAVPSFTQQILCPK 24 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 AVPIGT(0.88)PPKQMAVPS(0.105)FT(0.015)QQILCPK 106.04 0.0027524 221300000.0 140840.0 297140.0 222740.0 184520.0 219960.0 281740.0 170310.0 171300.0 256000.0 181010.0 True False 133027.32444242065 282864.94838376704 237098.1767966005 202056.72532203913 237269.60059879793 279981.5561538537 187526.59686542352 170705.8002817205 209516.85323483398 179406.39222364893 0.7414859793657079 1.5766715158685436 1.3215703958922083 1.1262515388534995 1.322525901435086 1.5605996680699497 1.0452615123749431 0.9515034451443501 1.1678338248597586 1.0 17.452871768624124 -6.944273761348222 24.999776159149306 1.0354756171236565 1.2875086404400087 0.20305475130296569 0.22595429388033342 128.20050177026462 57512.47002385584 0.09158346067985508 0.061745545666502547 1.1369103984251918e-07 6.944273761348222 0.25203302331635213 AVPMAPAPAS(ph)PGSSNDSSAR ddPTM_KYSE-520_SHP099_60min_R1 8 AVPMAPAPASPGSSNDSSAR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 AVPMAPAPAS(0.992)PGS(0.007)S(0.002)NDSSAR;AVPMAPAPAS(0.669)PGS(0.269)S(0.062)NDSSAR;AVPMAPAPAS(1)PGSSNDSSAR;AVPMAPAPAS(0.994)PGS(0.004)S(0.001)NDSSAR;AVPMAPAPAS(1)PGSSNDSSAR;AVPMAPAPAS(0.999)PGS(0.001)SNDSSAR;AVPMAPAPAS(0.993)PGS(0.006)S(0.001)NDSSAR;AVPMAPAPAS(0.998)PGS(0.001)SNDSSAR 302.9 1.3951e-44 7417660000.0 2554140.0 3397860.0 2097980.0 1995009.0 2163520.0 3022170.0 2208770.0 2972050.0 3187570.0 2925480.0 True False 2412456.762648144 3234621.705308162 2233219.1476866836 2184614.055538674 2333776.7152551003 3003307.5160129583 2432054.027117852 2961740.652231683 2608787.6401006216 2899562.5231890003 0.8320071539602025 1.1155550809611985 0.7701917547308281 0.753428849375522 0.8048720096879867 1.0357795329448034 0.8387658509405163 1.0214439690627184 0.8997176709372771 1.0 21.467403816724396 -6.250515993420871 24.887937608104558 0.9529581834553503 0.8592966828854839 0.18448045414666836 0.10870136944098971 1435.2720219333698 3270137.893294271 0.03740336511492394 0.037044268763948236 5.616735936636659e-07 6.250515993420871 -0.09366150056986644 AVPPVS(ph)PELR ddPTM_KYSE-520_SHP099_60min_R1 8 AVPPVSPELR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR;AVPPVS(1)PELR 130.01 0.00036296 7681480000.0 6772020.0 6821720.0 5627880.0 4776180.0 5215830.0 6439030.0 5325930.0 6326500.0 7360390.0 6449520.0 True False 6396362.550912818 6493994.331589519 5990662.149726385 5230106.711189115 5626286.1469868515 6398841.625333102 5864326.980467774 6304554.848116208 6023928.716332569 6392382.2704506265 1.0006226599558339 1.0158958048564466 0.9371564303059238 0.8181780265810703 0.8801548325723377 1.00101047694102 0.917393036329533 0.9862606116751795 0.9423605256179268 1.0 22.607922254685334 -7.2680398094747085 24.432641586891194 0.973232925885875 0.9370626683088499 0.07925173707726507 0.058259869652266386 1285.1069581946967 4756997.738453058 0.03434757010512927 0.017121996842515502 5.394611707006642e-08 7.2680398094747085 -0.03617025757702508 AVPSWFVR ddPTM_KYSE-520_SHP099_60min_R1 1 AVPSWFVR 8 0 A0A0A0MSX9;P41252;J3KR24 A0A0A0MSX9 IARS Isoleucine--tRNA ligase, cytoplasmic 0 115.69 0.013826 0.0 88750.0 75061.0 60830.0 48617.0 88855.0 68203.0 61426.0 59602.0 69857.0 61735.0 False True 83826.86058126124 71454.95689114204 64751.19913144122 53237.54506276598 95847.38298420701 67777.31977838169 67635.53953998891 59395.25457321139 57172.72975166318 61188.07592910321 1.369986869310761 1.16779218509722 1.0582323132119156 0.8700640484994288 1.5664389103403498 1.107688364917917 1.105371242893079 0.9706998246199291 0.9343769825007655 1.0 15.900962913610432 -7.0645648092884565 2.2612950707499198 0.9611379392506488 1.1851362557401466 0.24644757541570617 0.1739696793184465 0.4985882301977703 4.978616379680569 0.10463702479741903 0.053379610735363736 8.618569551421653e-08 7.0645648092884565 0.22399831648949775 AVPVES(ph)PVQKV ddPTM_KYSE-520_SHP099_60min_R1 3 AVPVESPVQKV 11 1 Q8TB61-5;Q8TB61-4;Q8TB61-3;Q8TB61-2;Q8TB61 Q8TB61-5 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 1 AVPVES(1)PVQKV;AVPVES(1)PVQKV;AVPVES(1)PVQKV 120.53 0.00023866 3212060000.0 3210370.0 3859990.0 2881160.0 2827910.0 2751780.0 3776710.0 2645390.0 4059500.0 4890700.0 3504730.0 True False 3032284.3763860716 3674550.286436891 3066884.1836189935 3096673.716157858 2968329.4305135505 3753138.1519905534 2912811.837718411 4045418.541994427 4002672.164514066 3473680.8188386797 0.8729312031034056 1.0578261153151562 0.8828917633958994 0.8914675462880142 0.8545199128300803 1.0804499168824906 0.8385375599051791 1.1645913234327874 1.1522855360822237 1.0 21.728033766598237 -7.270235918938282 24.99581434106747 1.1188288331971121 0.9308856649284655 0.46548060189070417 0.08797330778251973 553.1224208289639 1571714.9184937705 0.04524268032476972 0.022260040308026363 5.367401473380368e-08 7.270235918938282 -0.18794316826864665 AVQQHQHGYDS(ph)DEEVDSELGTWEHQLR ddPTM_KYSE-520_SHP099_60min_R1 13 AVQQHQHGYDSDEEVDSELGTWEHQLR 27 0 Q8IWZ8 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 1 AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(0.972)DEEVDS(0.027)ELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(0.927)DEEVDS(0.073)ELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR;AVQQHQHGYDS(1)DEEVDSELGTWEHQLR 335.77 3.5347e-78 42401260000.0 5166939.0 5009051.0 5258927.0 4758333.0 5092997.0 4889661.0 4792770.0 5675677.0 6173927.0 4938409.0 True False 4880318.593632461 4768408.671221162 5597925.849000708 5210563.537675023 5493786.8887110185 4859142.811971342 5277269.964527607 5655989.401199972 5052897.488834283 4894658.538284059 0.997070287020139 0.9742066037752336 1.1436805663185643 1.0645407635527753 1.122404524389356 0.9927439828468264 1.0781691763073797 1.15554320223997 1.0323289049302506 1.0 22.222776787210933 -4.7379573311675385 24.998537231030426 1.077915543531204 0.9856383512534058 0.3031648565411498 0.05307905865985575 261.9245252416662 278835.64751578576 0.01299668073130139 0.034343189717494026 1.8282798332851658e-05 4.7379573311675385 -0.09227719227779818 AVQTLAGSQPTSDKPSQRPSESTNCS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 AVQTLAGSQPTSDKPSQRPSESTNCSPTR 29 2 Q9NR48-2;Q9NR48 Q9NR48-2 ASH1L Histone-lysine N-methyltransferase ASH1L 1 AVQTLAGSQPTSDKPS(0.003)QRPS(0.076)ES(0.076)T(0.076)NCS(0.768)PT(0.001)R;AVQTLAGSQPTSDKPS(0.044)QRPS(0.03)ES(0.166)T(0.114)NCS(0.625)PT(0.021)R 209.92 2.5793e-22 1626770000.0 633190.0 599470.0 508280.0 467466.0 515980.0 525810.0 515430.0 629520.0 671260.0 553930.0 True False 598065.6884670292 570670.5613771854 541044.5420767537 511893.82809122186 556584.6904753938 522528.22475068376 567534.6945120383 627336.3420510732 549376.1050875563 549022.6111510183 1.0893279736023855 1.039429979360563 0.9854685965345968 0.9323729436535292 1.0137737119943415 0.9517426316107648 1.0337182531011058 1.1426420866999836 1.0006438604337204 1.0 19.066506041378936 -6.995914383521839 24.932245239077 1.060621818868732 0.9997022294256627 0.11224803803987438 0.055538015415082964 185.9576422463709 1134790.189315668 0.023622070272583957 0.015849429593616057 1.0094518690228423e-07 6.995914383521839 -0.0609195894430693 AVQTRPVLQPQPGS(ph)LNSSIWDGSEVLR ddPTM_KYSE-520_SHP099_60min_R1 2 AVQTRPVLQPQPGSLNSSIWDGSEVLR 27 1 Q86TB9;Q86TB9-4 Q86TB9 PATL1 Protein PAT1 homolog 1 1 AVQTRPVLQPQPGS(1)LNSSIWDGSEVLR;AVQTRPVLQPQPGS(1)LNSSIWDGSEVLR 149.74 6.8325e-07 750990000.0 149388.0 181015.0 196895.0 189292.0 206642.0 201401.0 167982.0 154136.0 262888.0 233152.0 True False 141101.14984240505 172318.76769094577 209587.16674313866 207282.25476728517 222903.54976785232 200143.98165309243 184963.25990633306 153601.33819161297 215154.16606718334 231086.4546695112 0.6105989641158378 0.7456896075427174 0.9069643092793137 0.8969900683436004 0.9645894221132014 0.8661000141238429 0.8004071903342784 0.664692088557446 0.931054857260615 1.0 17.818073171915046 -4.481604716794562 2.9857739658535047 0.8670243037525577 0.613043059972705 0.47192387334435015 0.08948302391543929 0.27170929192222254 4.381706630178872 0.02456809080579461 0.12630892737370655 3.299098506776232e-05 4.481604716794562 -0.25398124377985265 AVRPEVNTVASSDEVCDGDREKEEPPS(ph)PIEATPPQSLLEK ddPTM_KYSE-520_SHP099_60min_R1 3 AVRPEVNTVASSDEVCDGDREKEEPPSPIEATPPQSLLEK 40 3 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 AVRPEVNT(0.004)VAS(0.001)S(0.001)DEVCDGDREKEEPPS(0.937)PIEAT(0.055)PPQSLLEK;AVRPEVNTVASSDEVCDGDREKEEPPS(1)PIEATPPQSLLEK;AVRPEVNT(0.008)VAS(0.008)S(0.008)DEVCDGDREKEEPPS(0.976)PIEATPPQSLLEK 179.1 3.0275e-11 2261560000.0 757515.0 876368.0 784020.0 594969.0 632261.0 657260.0 538339.0 664899.0 952960.0 711721.0 True False 715494.132881286 834265.9658248136 834559.1836763541 651514.6748760471 682016.3436270081 653157.7965417815 592759.5598023332 662592.620557593 779926.4861666685 705415.7056505593 1.014287216955897 1.1826586212103458 1.18307428795719 0.9235896927970965 0.9668289749772846 0.9259189883494532 0.8402982171422869 0.9392938309284263 1.1056267671945192 1.0 19.42811417128396 -5.266279287669411 24.9890296920952 0.9490420550938514 1.132271902946535 0.5001819191279739 0.07718465224950198 309.43540845900276 1597653.4590980373 0.02208388124360215 0.033989205083050235 5.416524505546698e-06 5.266279287669411 0.18322984785268348 AVS(ph)LDSPVSVGSSPPVK ddPTM_KYSE-520_SHP099_60min_R1 4 AVSLDSPVSVGSSPPVK 17 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 AVS(0.996)LDS(0.004)PVSVGSSPPVK;AVS(0.755)LDS(0.245)PVSVGSSPPVK;AVS(1)LDSPVSVGSSPPVK;AVS(0.6)LDS(0.4)PVSVGSSPPVK 335.7 1.0111e-58 11655900000.0 8616900.0 8431500.0 6435950.0 4939550.0 5281220.0 10756900.0 7383470.0 9665200.0 11797600.0 9976000.0 True False 8138903.379635724 8026438.084060477 6850821.634884098 5409003.34687014 5696821.967968642 10689762.197030544 8129863.2033230495 9631673.677074643 9655453.233294044 9887620.40121056 0.8231407608082592 0.8117664067157944 0.6928685929372186 0.5470480385966179 0.5761570263428771 1.0811258688411802 0.8222264683955399 0.9741144265505398 0.9765194092718111 1.0 23.23719192666402 -6.260381189320494 24.999081105300235 0.9598937145141113 0.6891458607191413 0.658660512624207 0.10084604968365174 68.58725518668693 1620345.767112428 0.03737248786976487 0.03538534940883062 5.490587419959187e-07 6.260381189320494 -0.27074785379497 AVS(ph)MDNSNK ddPTM_KYSE-520_SHP099_60min_R1 7 AVSMDNSNK 9 0 O43524-2;O43524 O43524-2 FOXO3 Forkhead box protein O3 1 AVS(1)MDNSNK;AVS(1)MDNSNK;AVS(1)MDNSNK;AVS(1)MDNSNK;AVS(0.982)MDNS(0.018)NK;AVS(1)MDNSNK;AVS(1)MDNSNK 162.68 0.00012958 5184300000.0 7334230.0 6671470.0 6328290.0 6464140.0 7472790.0 7112840.0 6822530.0 7705110.0 8918470.0 7605680.0 True False 6927385.641474974 6350962.56711937 6736221.699022008 7078489.922085437 8060856.058641069 7068446.127185964 7512217.913876219 7678382.7717961995 7299100.664333076 7538299.592329504 0.9189586532914986 0.8424927252270137 0.8935996263502661 0.9390035292956597 1.0693202041005754 0.9376711605331217 0.9965401111837179 1.0185828617914356 0.9682688482904259 1.0 22.845807702052518 -5.446715557822425 3.567553014433768 0.9968123022109137 0.881524269300256 0.6542572833721739 0.0368159559846649 0.13935483570364657 3.396279611382718 0.010444494584529212 0.015684390655653645 3.5750691147046423e-06 5.446715557822425 -0.1152880329106577 AVS(ph)MDNSNKYTK ddPTM_KYSE-520_SHP099_60min_R1 2 AVSMDNSNKYTK 12 1 O43524-2;O43524 O43524-2 FOXO3 Forkhead box protein O3 1 AVS(0.999)MDNS(0.001)NKYTK;AVS(1)MDNSNKYTK 142.91 2.0422000000000002e-05 2080400000.0 1574930.0 1744560.0 1633390.0 1307320.0 1448940.0 1392770.0 1106690.0 1269820.0 2263400.0 1406260.0 True False 1487565.4933548807 1660748.7189620521 1738680.9329164033 1431567.2997399082 1562963.3346591308 1384077.205808201 1218565.02545356 1265415.2907982166 1852423.61567079 1393801.630453725 1.0672720284238961 1.191524448440649 1.2474378670014967 1.0270954406000294 1.12136713037876 0.9930230927894966 0.874274357863163 0.9078876528407311 1.3290439436979058 1.0 20.41059381695437 -5.6685897073456415 1.7012796994971695 1.0132342684485103 1.1649606334531224 0.15646179775657398 0.12756452050520892 0.611340524276903 3.6435544769225126 0.045229994495748584 0.06532090958402284 2.144916018782399e-06 5.6685897073456415 0.15172636500461212 AVS(ph)PAPQSSSR ddPTM_KYSE-520_SHP099_60min_R1 7 AVSPAPQSSSR 11 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 AVS(1)PAPQSSSR;AVS(1)PAPQSSSR;AVS(1)PAPQSSSR;AVS(1)PAPQSSSR;AVS(1)PAPQSSSR;AVS(1)PAPQSSSR;AVS(1)PAPQSSSR 143.42 0.00014340000000000002 4954860000.0 5979580.0 6287520.0 5161090.0 4181330.0 4406020.0 5809340.0 4875590.0 5816480.0 6823330.0 5805620.0 True False 5647880.777402799 5985458.101440072 5493782.119435977 4578722.346037294 4752748.707175466 5773081.7541947495 5368462.218372915 5796303.988456641 5584385.274151715 5754186.723504011 0.9815254611625678 1.040191844486275 0.9547451939638378 0.7957201540462145 0.8259635871324803 1.0032837013462839 0.9329662863466813 1.007319412277776 0.9704907995670855 1.0 22.456180606651362 AVS(ph)PAVPFSR ddPTM_KYSE-520_SHP099_60min_R1 8 AVSPAVPFSR 10 0 I3L2J0 I3L2J0 CIC 1 AVS(1)PAVPFSR;AVS(1)PAVPFSR;AVS(1)PAVPFSR;AVS(1)PAVPFSR;AVS(1)PAVPFSR;AVS(1)PAVPFSR;AVS(1)PAVPFSR;AVS(1)PAVPFSR 144.7 0.00010229 9039780000.0 9776160.0 9682360.0 8947050.0 7438630.0 7478420.0 8613600.0 7099000.0 8688840.0 10553050.0 8597710.0 True False 9233856.916508205 9217204.892081352 9523791.15878616 8145595.158694335 8066929.107610756 8559839.327347307 7816636.199563405 8658700.442030495 8636882.140741644 8521540.978317155 1.0835900384688075 1.0816359289398827 1.1176137253836138 0.9558828830865915 0.9466514481520247 1.0044942985227203 0.9172796586266073 1.016095617454911 1.013535247054256 1.0 23.02268291066183 -5.262502317669345 24.9996063706632 0.9769307681288456 1.0930155042709504 0.7372881249970156 0.031475746557788564 46.96994493489167 1104714.3679689523 0.008856704771617551 0.014055399685132367 5.463836340262983e-06 5.262502317669345 0.1160847361421048 AVS(ph)PFAK ddPTM_KYSE-520_SHP099_60min_R1 3 AVSPFAK 7 0 A0A3B3ITL0;Q9Y2H2;A0A3B3IRJ9;Q9Y2H2-4 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 AVS(1)PFAK;AVS(1)PFAK;AVS(1)PFAK 84.083 0.0097985 1420810000.0 1509190.0 1652050.0 1651330.0 1348470.0 1458990.0 1491790.0 1299360.0 1422330.0 2306050.0 1488230.0 True False 1425472.2222043208 1572683.0382223947 1757777.3740214207 1476628.1833677094 1573804.2124824526 1482479.1852585962 1430711.9893315544 1417396.269204318 1887329.4507897985 1475045.440025419 0.9663920741179038 1.0661929426359185 1.191676762168852 1.0010730132776542 1.066953037362247 1.0050396720205779 0.9699443491767273 0.960917020413888 1.2795059728853335 1.0 20.49232796792717 -11.422606923867768 2.333210448434484 0.49158621433789595 1.052496505709969 0.026847299761160515 0.09940482317441796 27135831.09079035 18989442.70593549 64791921.86822428 0.02557880610316661 3.7791408290720975e-12 11.422606923867768 0.5609102913720732 AVS(ph)PPHLDGPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 10 AVSPPHLDGPPSPR 14 0 P29590-12;P29590-13;P29590-11;H3BT57;H3BUJ5;H3BRN3;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4;H3BVD2 P29590-12;P29590-2 PML Protein PML 2 AVS(1)PPHLDGPPS(1)PR;AVS(1)PPHLDGPPS(1)PR;AVS(1)PPHLDGPPS(1)PR;AVS(1)PPHLDGPPS(1)PR;AVS(1)PPHLDGPPS(1)PR;AVS(1)PPHLDGPPS(1)PR;AVS(1)PPHLDGPPS(1)PR;AVS(1)PPHLDGPPS(1)PR;AVS(1)PPHLDGPPS(1)PR;AVS(1)PPHLDGPPS(1)PR 179.81 6.7247e-09 19405450000.0 4987230.0 4595810.0 4209390.0 4130190.0 4399020.0 4416210.0 4053460.0 4442770.0 5169120.0 4269960.0 True False 4710578.410103477 4375020.389148554 4480734.014662135 4522722.015813092 4745197.847000017 4388646.795280076 4463223.294757323 4427359.067820317 4230538.110911104 4232131.476378612 1.1130510562810458 1.0337628718690492 1.0587416859970167 1.0686629281383135 1.1212311983890515 1.036982622060549 1.0546041208002483 1.0461298502967964 0.9996235075690816 1.0 22.01295301657126 -7.494684036071962 1.11031618078373 0.9962146305009097 1.0722966834567669 0.5214496431076217 0.026679131323040874 0.41360160892051623 0.9238836108432152 0.024480434506320592 0.008715411174079415 3.201223260906012e-08 7.494684036071962 0.07608205295585713 AVS(ph)PSNPK ddPTM_KYSE-520_SHP099_60min_R1 4 AVSPSNPK 8 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 AVS(0.987)PS(0.013)NPK;AVS(0.997)PS(0.003)NPK;AVS(0.586)PS(0.414)NPK;AVS(0.985)PS(0.015)NPK 149.23 0.00043649 6712400000.0 13478800.0 13534900.0 10483400.0 9582500.0 10416100.0 11554400.0 9180900.0 11755200.0 13652100.0 11677700.0 True False 12731104.094678365 12884663.0877009 11159176.738033073 10493217.918916315 11235787.810498 11482284.703712948 10108994.968949376 11714423.9548843 11173222.781434665 11574244.663113134 1.0999511817174659 1.1132184831692769 0.9641386598295374 0.906600665904184 0.9707577589323138 0.9920547766116211 0.8734042923048381 1.012111312301693 0.9653522200929001 1.0 23.464414710281257 -4.770780298514707 8.73543748246419 0.957316217466168 1.1068508657618021 0.6799830907746324 0.04002553063269156 0.0656156918298263 41.48526467921945 0.010198482542443378 0.022927629411591828 1.695195151207096e-05 4.770780298514707 0.14953464829563412 AVS(ph)PSSSEK ddPTM_KYSE-520_SHP099_60min_R1 4 AVSPSSSEK 9 0 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 1 AVS(0.872)PS(0.063)S(0.063)S(0.001)EK;AVS(0.972)PS(0.013)S(0.013)S(0.001)EK;AVS(1)PSSSEK;AVS(0.999)PSSSEK 163.84 0.0023016 0.0 2904250.0 2669810.0 2260980.0 2213180.0 2618470.0 3098530.0 2813930.0 2674260.0 2950340.0 3120040.0 True False 2743145.463021157 2541548.3201334914 2406726.388495907 2423519.9617831684 2824528.6919436925 3079190.9249286535 3098389.5057103 2664983.616236976 2414632.628018982 3092398.872954387 0.8870606851568394 0.8218695014933085 0.7782716549099603 0.7837022523125577 0.9133778687628419 0.9957288989653799 1.0019372121779975 0.8617852113271949 0.7808283236476905 1.0 21.560294986555665 -5.826392359624764 6.720267437680153 0.9268405351208118 0.8153910671254776 0.3636654400325986 0.06996809355927801 0.25312107594852484 20.711844423476762 0.02349167483118984 0.02685265421075266 1.4914463663040063e-06 5.826392359624764 -0.11144946799533417 AVS(ph)PSSSEKR ddPTM_KYSE-520_SHP099_60min_R1 5 AVSPSSSEKR 10 1 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 1 AVS(0.679)PS(0.321)SSEKR;AVS(0.94)PS(0.059)S(0.002)SEKR;AVS(0.988)PS(0.012)SSEKR;AVS(0.99)PS(0.01)SSEKR;AVS(0.982)PS(0.016)S(0.002)SEKR 199.4 1.0083e-06 5850410000.0 5103400.0 4945410.0 4655060.0 4320760.0 4784130.0 4647780.0 4331950.0 4276600.0 5848570.0 4439080.0 True False 4820304.228624319 4707825.080388254 4955132.615959345 4731403.731316141 5160613.81302385 4618771.481013548 4769865.78175781 4261765.472765949 4786617.118451768 4399753.2047519805 1.0955851395069431 1.0700202627964537 1.1262296736570414 1.075379347688402 1.1729325652743654 1.0497796731018947 1.0841212131185194 0.9686373926980728 1.0879285486472179 1.0 22.068991170286335 -6.853533623099099 2.0108198387198075 1.0229013017028983 1.1035505962739822 0.4001864008450451 0.04273733280021457 0.32112364577490626 2.637898322245381 0.021407259322765687 0.012687821408182615 1.4010911082018036e-07 6.853533623099099 0.08064929457108394 AVSETPAVPPVS(ph)EDEDDDDDDATPPPVIAPRPEHTK ddPTM_KYSE-520_SHP099_60min_R1 6 AVSETPAVPPVSEDEDDDDDDATPPPVIAPRPEHTK 36 1 E9PM17;B3KNX7;Q13153;Q13153-2;H0YCM0 E9PM17 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 AVS(0.001)ET(0.001)PAVPPVS(0.995)EDEDDDDDDAT(0.003)PPPVIAPRPEHTK;AVSETPAVPPVS(1)EDEDDDDDDATPPPVIAPRPEHTK;AVSETPAVPPVS(1)EDEDDDDDDATPPPVIAPRPEHTK;AVSETPAVPPVS(1)EDEDDDDDDATPPPVIAPRPEHTK;AVSETPAVPPVS(1)EDEDDDDDDATPPPVIAPRPEHTK;AVSETPAVPPVS(1)EDEDDDDDDATPPPVIAPRPEHTK 208.18 1.7694999999999998e-22 15510600000.0 7597310.0 7727870.0 6602910.0 6542760.0 6430860.0 7012860.0 6508290.0 7270070.0 8363940.0 6983510.0 True False 7175872.069437998 7356611.525430638 7028544.143629544 7164581.943247479 6936932.095411821 6969090.1394516695 7166211.467989369 7244851.824017087 6845259.333769349 6921641.534488572 1.036729803715299 1.0628420279748285 1.0154446901949932 1.0350986695205762 1.002209094598017 1.0068551086800255 1.0353340941281306 1.0466956122934206 0.9889647274654962 1.0 22.722682796899917 -4.772949538732631 24.998400136929277 1.0184999451097885 1.049785916261727 0.34564414079948613 0.0182201331527859 218.92888059752832 475483.8880957883 0.00472352544640376 0.009968324266780319 1.6867489996669158e-05 4.772949538732631 0.03128597115193843 AVSGGS(ph)PERR ddPTM_KYSE-520_SHP099_60min_R1 1 AVSGGSPERR 10 1 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 AVS(0.008)GGS(0.992)PERR 89.266 0.0040009 520640000.0 418810.0 410240.0 386890.0 373310.0 384730.0 365740.0 391940.0 354400.0 501140.0 353190.0 True False 395577.77442296396 390531.454617206 411829.5484458868 408789.2701602558 415006.0621857407 363457.28099563526 431561.120165781 353170.66911758145 410145.60871134646 350061.0113776618 1.1300252286484902 1.115609684952555 1.1764507758951377 1.1677657804605817 1.1855249476440928 1.0382683851744945 1.2328168694576307 1.0088831878982514 1.1716403580542212 1.0 18.417246862611748 -9.260556403116533 0.37447993241237965 0.9675601148568981 1.1510034947899348 0.29189670020652747 0.0644330482838359 7.653654465434619 1.2430627440705608 0.4053151246718761 0.04682938615852324 5.488372718487622e-10 9.260556403116533 0.18344337993303672 AVSPPHLDGPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 10 AVSPPHLDGPPSPR 14 0 P29590-12;P29590-13;P29590-11;H3BT57;H3BUJ5;H3BRN3;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4;H3BVD2 P29590-12;P29590-2 PML Protein PML 1 AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR;AVSPPHLDGPPS(1)PR 217.88 4.4996e-14 11620610000.0 4553810.0 4710450.0 4553710.0 5047440.0 4265690.0 4697920.0 4183990.0 4535340.0 5064150.0 4472270.0 True False 4301201.081504826 4484152.911470407 4847249.432793612 5527147.180031825 4601375.534543951 4668598.538675062 4606948.541007365 4519607.964096311 4144628.016832746 4432649.16717341 0.9703454794839077 1.0116191790404743 1.0935332912630624 1.2469173560957338 1.0380644533341523 1.0532298773494206 1.0393217164861035 1.0196177937037936 0.935022795741733 1.0 22.079737750729088 -7.20786813251258 1.45681029803865 0.9710779624344661 1.0755833012072737 0.23224807633267097 0.07039598734199748 0.6843515208615464 2.6296744826807874 0.060604444257651185 0.024233676185134195 6.196291883132181e-08 7.20786813251258 0.10450533877280765 AVSPS(ph)SSEKR ddPTM_KYSE-520_SHP099_60min_R1 2 AVSPSSSEKR 10 1 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 1 AVS(0.364)PS(0.636)SSEKR;AVS(0.077)PS(0.91)S(0.013)SEKR 210.15 3.6863e-09 2964100000.0 2923500.0 2736700.0 2623200.0 2538300.0 2700500.0 2461400.0 2417700.0 2395200.0 3332200.0 2418800.0 True False 2761327.6271472373 2605224.824129556 2792295.6692684013 2779539.2688322775 2913013.9862568337 2446037.4895900288 2662104.710478159 2386891.6102438825 2727156.4779262245 2397371.3137979265 1.1518147444472127 1.086700591241474 1.164732243686037 1.1594112488269157 1.2150866949525745 1.020299807339817 1.1104265305739562 0.9956286689951912 1.1375611538480666 1.0 21.19302194559854 -6.271380544472663 24.988580733244216 1.056112729364281 1.1524489262342645 0.5017085437811764 0.05110719656378746 625.686418606104 1572750.574249157 0.017237938096157535 0.015370644518762364 5.35327378806769e-07 6.271380544472663 0.09633619686998363 AVSRLS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 AVSRLSR 7 1 O43665 O43665 RGS10 Regulator of G-protein signaling 10 1 AVSRLS(1)R 66.568 0.021508000000000003 598310000.0 332960.0 290670.0 264280.0 250230.0 222980.0 228940.0 210510.0 225890.0 293370.0 264330.0 True False 314490.0450606955 276705.77689543506 281315.9116629504 274011.78396560735 240527.25741734853 227511.1005390191 231790.40517961554 225106.4403131225 240101.40325587167 261988.24184562796 1.2003975554216029 1.056176319006252 1.073773042947137 1.04589344176394 0.9180841694379364 0.868401951691695 0.8847359085534611 0.8592234473093742 0.9164586989264475 1.0 17.99914253882679 -5.552051030261178 1.4223659388309255 0.8922080745018622 1.121447680655865 0.7681624730995094 0.050921854619891564 0.18533831522533095 0.7648330693229258 0.017660071440944624 0.03019709899463966 2.805104014604699e-06 5.552051030261178 0.22923960615400285 AVSTVVVTTAPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 AVSTVVVTTAPSPK 14 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 AVSTVVVTTAPS(1)PK 160.8 1.7191e-05 0.0 250300.0 289860.0 204940.0 127760.0 198930.0 263140.0 135580.0 257490.0 304280.0 241140.0 True False 236415.36003932045 275934.69051126996 218150.7603155937 139902.27198755546 214584.6592431302 261497.64565317286 149285.74953328722 256596.8272886175 249030.42227459044 239003.68720408104 0.9891703463028566 1.1545206425022816 0.9127506059323621 0.5853561241006938 0.8978299111339657 1.0941155289787836 0.6246169307246492 1.0736103291557757 1.0419522191804 1.0 17.866673349839527 -9.272406608873391 7.841079657624876 1.000000003520488 0.9254284701925655 0.012448796455697408 0.18099624663111885 0.0 0.0 0.1809358070473328 0.04388337905367821 5.340641069149273e-10 9.272406608873391 -0.07457153332792243 AVT(ph)PSSEAK ddPTM_KYSE-520_SHP099_60min_R1 4 AVTPSSEAK 9 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5 Q99700 ATXN2 Ataxin-2 1 AVT(0.964)PS(0.031)S(0.005)EAK;AVT(0.982)PS(0.015)S(0.003)EAK;AVT(0.97)PS(0.015)S(0.015)EAK;AVT(0.931)PS(0.061)S(0.009)EAK 146.71 0.0015342 4000910000.0 8092500.0 10031500.0 7125800.0 6275150.0 6800100.0 9116100.0 6632650.0 8845000.0 10173900.0 9020300.0 True False 7643592.893001201 9549571.682411516 7585140.469683124 6871538.369307363 7335229.18272362 9059203.038454393 7303142.990425992 8814318.759438522 8326576.223147953 8940387.159687208 0.8549509944565558 1.0681384946583925 0.8484129752104047 0.7685951678123718 0.8204599031011375 1.0132897912187666 0.8168709989827222 0.9858989998982218 0.9313440317990961 1.0 23.091905877384516 -7.618672186417973 1.1543443288285524 0.9925308910949823 0.8868333073860243 0.14216398775382222 0.08955661309707547 1.0016843810337113 2.5334943780977177 0.08631169614954404 0.029284286501901863 2.4061783430479254e-08 7.618672186417973 -0.10569758370895799 AVT(ph)PVPTK ddPTM_KYSE-520_SHP099_60min_R1 11 AVTPVPTK 8 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 AVT(1)PVPTK;AVT(1)PVPTK;AVT(1)PVPTK;AVT(1)PVPTK;AVT(0.999)PVPT(0.001)K;AVT(0.991)PVPT(0.009)K;AVT(0.999)PVPT(0.001)K;AVT(1)PVPTK;AVT(0.966)PVPT(0.034)K;AVT(0.859)PVPT(0.141)K;AVT(0.998)PVPT(0.002)K 146.11 0.0023685 115839500000.0 152567500.0 173809700.0 126142700.0 110233000.0 116365800.0 158557100.0 121625900.0 159151400.0 169918200.0 164936400.0 True False 144104276.6392289 165459621.11832157 134274060.27745602 120709511.17724015 125523126.42916702 157567486.32513002 133921032.92639507 158599340.93961596 139065338.16924673 163475191.81457743 0.8815054751713026 1.0121390241645656 0.8213727036317354 0.7383965104268269 0.7678420501353028 0.9638617613848818 0.8192131872724498 0.9701737565141265 0.8506816026677755 1.0 27.284496475179132 -8.371636050053848 0.6553821287903648 0.999547363909239 0.8582102682058765 0.18034703277101627 0.08472923451804153 2.516628468492983 2.072998395317346 0.10077256722863633 0.03623473798880544 4.249755552064546e-09 8.371636050053848 -0.1413370957033625 AVT(ph)PVPTKTEEVSNLK ddPTM_KYSE-520_SHP099_60min_R1 6 AVTPVPTKTEEVSNLK 16 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 AVT(0.999)PVPT(0.001)KTEEVSNLK;AVT(1)PVPTKTEEVSNLK;AVT(0.795)PVPT(0.202)KT(0.003)EEVSNLK;AVT(0.971)PVPT(0.028)KT(0.001)EEVSNLK;AVT(0.984)PVPT(0.016)KTEEVSNLK;AVT(0.998)PVPT(0.002)KTEEVSNLK 227.0 7.181599999999999e-18 14050950000.0 10256400.0 12552450.0 9097430.0 6554440.0 7579320.0 9178920.0 6457470.0 8988120.0 13561680.0 9745770.0 True False 9687457.046373485 11949411.460388426 9683864.894202666 7177372.006935759 8175769.363568286 9121630.955532506 7110254.0864339555 8956942.309562983 11099220.774131943 9659430.059894327 1.0029015155454695 1.237072103249863 1.0025296352017488 0.7430430121064803 0.8464028739660162 0.9443239299806365 0.7360945772520807 0.9272744099832502 1.1490554520618752 1.0 23.203506636850918 -4.998645126918962 24.55884771177302 0.8937788884459162 1.1199404103365291 0.31329494060079444 0.1254487422007378 38.979814307472544 706479.1142525357 0.032853303549410136 0.0675222092533318 1.003124581920712e-05 4.998645126918962 0.2261615218906129 AVT(ph)TPGK ddPTM_KYSE-520_SHP099_60min_R1 4 AVTTPGK 7 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AVT(0.5)T(0.5)PGK;AVT(0.6)T(0.4)PGK;AVT(0.5)T(0.5)PGK;AVT(0.5)T(0.5)PGK 123.35 0.011222 7479740000.0 23210500.0 26817500.0 20198300.0 20230800.0 19903300.0 26988000.0 27948800.0 19851900.0 30325800.0 32877200.0 True False 21922967.296015345 25529147.046111833 21500314.736422677 22153529.14938817 21469576.475714028 26819557.88130969 30774137.458002206 19783038.392368287 24819399.17120673 32585933.58607453 0.6727739513157308 0.7834407131125318 0.6598035523404722 0.6798494537795103 0.6588602538884744 0.823040954480154 0.9443994408419654 0.6071036246395128 0.7616599078141252 1.0 24.957745992930025 -6.268199211456697 24.424411175323186 0.810007184299926 0.693737638106055 0.29204862719520797 0.10434687306040853 624.8627142800485 2257725.70795564 0.036609232263522376 0.033028378761485275 5.392632050244419e-07 6.268199211456697 -0.11626954619387098 AVT(ph)TPGKK ddPTM_KYSE-520_SHP099_60min_R1 2 AVTTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AVT(0.5)T(0.5)PGKK;AVT(0.904)T(0.096)PGKK 107.79 0.002482 9833700000.0 24088300.0 21163200.0 14826000.0 15375500.0 17444400.0 25351800.0 21813100.0 15203500.0 23441400.0 36439000.0 True False 22752073.980164465 20146488.105389163 15781707.68243875 16836782.89718736 18817175.034941215 25193570.012427293 24018181.023340806 15150762.607023586 19185032.669605598 36116178.809113 0.6299690258046777 0.5578244645390256 0.4369705822382471 0.4661839500290386 0.5210178832704521 0.6975701982644502 0.6650255319170263 0.4195007087294815 0.5312032806960392 1.0 25.106141924007936 -10.713019692782275 2.63781555588665 1.0795585830126135 0.5452908854863067 0.6989241709038678 0.08913745422098962 32963588.90600897 26734406.73570537 17335635.866402585 0.024128730890367635 1.9363341602254883e-11 10.713019692782275 -0.5342676975263069 AVTEQGHELSNEER ddPTM_KYSE-520_SHP099_60min_R1 3 AVTEQGHELSNEER 14 0 P31946-2;P31946;Q4VY20;Q4VY19;A0A0J9YWE8;A0A0J9YWZ2 P31946-2 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed 0 ;; 143.38 8.361e-06 609718000.0 373093.0 441755.0 301728.0 329915.0 400290.0 431221.0 256846.0 337666.0 318277.0 327906.0 False True 352396.7875475432 420532.42671222705 321177.8696618694 361270.02240743826 431790.5456614511 428529.58978569234 282810.50025539665 336494.7154578372 260485.9199102468 325001.0079470077 1.0842944450344671 1.293941915345678 0.9882365340671139 1.1115966214675381 1.3285821739108443 1.3185484946421004 0.8701834558664189 1.035365144198887 0.8014926524557725 1.0 18.310084666909887 -6.771569170117365 24.999998288292346 0.9297073669442202 1.1862708142977432 0.5370970128436938 0.11858448240271466 175.22629992688093 432448.73721590225 0.05056802346226432 0.034534841146684515 1.6921187190876627e-07 6.771569170117365 0.256563447353523 AVTFS(ph)PDLGPVPHEGLGEYNR ddPTM_KYSE-520_SHP099_60min_R1 3 AVTFSPDLGPVPHEGLGEYNR 21 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 AVT(0.016)FS(0.984)PDLGPVPHEGLGEYNR;AVT(0.021)FS(0.979)PDLGPVPHEGLGEYNR;AVT(0.02)FS(0.98)PDLGPVPHEGLGEYNR 191.2 2.1926e-13 711930000.0 438422.0 408622.0 342425.0 305865.0 372673.0 373242.0 321481.0 363104.0 482326.0 361249.0 True False 414101.85768741067 388991.1857658739 364498.2633993714 334934.3176383349 402000.2448806863 370912.45823091 353979.4368322072 361844.4769731108 394747.75684900174 358048.6149074692 1.1565520447395876 1.0864200266949817 1.0180133317749853 0.9354436903069496 1.1227532467471646 1.035927644425507 0.9886351240981239 1.0106015270206326 1.102497650915412 1.0 18.449795960597374 -4.4776964728389395 2.836941578784781 1.0265109657958915 1.156396489892353 0.3901088041348304 0.05103455837600204 0.312095629854669 4.433134591481916 0.01345930921722481 0.07318370562944113 3.32892129360441e-05 4.4776964728389395 0.1298855240964616 AVTIANS(ph)PSKPSEK ddPTM_KYSE-520_SHP099_60min_R1 10 AVTIANSPSKPSEK 14 1 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVTIANS(0.92)PS(0.08)KPSEK;AVTIANS(1)PSKPSEK;AVTIANS(0.896)PS(0.101)KPS(0.003)EK;AVTIANS(0.825)PS(0.175)KPSEK;AVTIANS(0.878)PS(0.122)KPSEK;AVTIANS(0.983)PS(0.016)KPS(0.001)EK;AVTIANS(0.987)PS(0.013)KPSEK;AVTIANS(0.825)PS(0.173)KPS(0.001)EK;AVTIANS(0.983)PS(0.017)KPSEK;AVTIANS(0.994)PS(0.006)KPSEK 268.08 6.7158999999999995e-28 35656190000.0 8690730.0 8665240.0 6754790.0 6578640.0 6656220.0 8160590.0 7235040.0 8682420.0 8747140.0 8773540.0 True False 8208637.882359255 8248948.863609582 7190214.571446135 7203871.967659765 7180026.645288823 8109656.730792846 7966428.450385845 8652302.711512068 7158879.873455252 8695813.261310838 0.9439758692704328 0.9486115462380693 0.8268593581047364 0.8284299295743878 0.8256877683004062 0.9325932477039378 0.9161223005822641 0.9949963794654658 0.8232559345893884 1.0 23.051889528793183 -6.303727563355373 23.14162037958293 0.9320014517404551 0.8735885692169159 0.18533182613067112 0.06145769071745612 385.97460680752596 211217.2513613511 0.022284893862033348 0.019653744543343 4.969039357917274e-07 6.303727563355373 -0.05841288252353927 AVTIANS(ph)PSKPSEKDSVVSLESQK ddPTM_KYSE-520_SHP099_60min_R1 2 AVTIANSPSKPSEKDSVVSLESQK 24 2 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVTIANS(0.98)PS(0.02)KPSEKDSVVSLESQK;AVTIANS(0.5)PS(0.5)KPSEKDSVVSLESQK 269.19 6.5098e-38 6067900000.0 3632500.0 4222000.0 3739200.0 2561500.0 2729900.0 3661300.0 2272650.0 2907300.0 5223900.0 3555400.0 True False 3430997.9837907795 4019168.7826488013 3980234.8149315286 2804944.189856941 2944727.598993716 3638448.4686097205 2502391.6409265758 2897215.254868922 4275371.443802533 3523901.9220593465 0.9736360601618916 1.1405450184323018 1.1294964794608995 0.7959768040927055 0.8356440287284826 1.0325056000660295 0.7101195482376518 0.822161149472573 1.2132492726426485 1.0 21.748742340765343 -5.249158668447571 24.91170611336623 0.901224979355311 1.0871577801981227 0.21871305964393817 0.14143218850593045 1010.695996265546 2050216.5909113141 0.03824672916627184 0.06562045101538151 5.634317697722207e-06 5.249158668447571 0.18593280084281172 AVTIANSPS(ph)KPSEKDSVVSLESQK ddPTM_KYSE-520_SHP099_60min_R1 1 AVTIANSPSKPSEKDSVVSLESQK 24 2 Q8NEF9 Q8NEF9 SRFBP1 Serum response factor-binding protein 1 1 AVT(0.001)IANS(0.197)PS(0.793)KPS(0.01)EKDSVVSLESQK 84.32700000000001 0.0043324 938090000.0 539000.0 737210.0 533500.0 431140.0 449640.0 417720.0 398790.0 454470.0 702000.0 539890.0 True False 509100.5955301386 701793.3250252309 567890.2636301811 472115.4159730321 485024.1098983614 415112.85453463346 439103.5850153382 452893.54964409594 574534.495979895 535106.9946280639 0.9513996278146176 1.3115009373275441 1.0612648859596834 0.8822822738491483 0.9064058492367241 0.7757567340773884 0.8205902547032586 0.8463607356859315 1.0736815286431378 1.0 19.029467861625513 -5.154035646954058 3.903389165246365 0.8858060375846916 1.1418396467675156 0.4048184120869055 0.11534243185846887 0.19773178219554635 5.330695180965453 0.031118217108704438 0.05698695743316723 7.013977252301892e-06 5.154035646954058 0.25603360918282403 AVTKDEDEWKELEQK ddPTM_KYSE-520_SHP099_60min_R1 4 AVTKDEDEWKELEQK 15 2 Q9UKY7-2;Q9UKY7 Q9UKY7-2 CDV3 Protein CDV3 homolog 0 ;;; 198.07 1.7052e-11 5179920000.0 6578530.0 6088320.0 4398280.0 3217560.0 5916040.0 5299380.0 3609210.0 4182870.0 5796770.0 4774830.0 False True 6213605.826925576 5795827.968445362 4681800.166296814 3523355.9350053156 6381598.690336936 5266304.6037147995 3974064.169295146 4168360.600259193 4744222.692680033 4732528.720961526 1.3129568130044298 1.2246788789203167 0.9892808775908695 0.7444975282240784 1.3484542971860427 1.112788725483915 0.8397337667900556 0.8807892875106084 1.0024709774431397 1.0 22.17417983076568 -6.745344365075401 24.523491211073974 0.92081430409772 1.1138583794192751 0.23721626044370525 0.1673376852641089 304.61606425902494 464134.39227656083 0.06806658385428006 0.05254349761903451 1.7974451019730687e-07 6.745344365075401 0.1930440753215551 AVTPS(ph)SEAK ddPTM_KYSE-520_SHP099_60min_R1 1 AVTPSSEAK 9 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5 Q99700 ATXN2 Ataxin-2 1 AVT(0.249)PS(0.511)S(0.24)EAK 85.53299999999999 0.004890600000000001 1968400000.0 1265600.0 1550500.0 1129900.0 993500.0 1099200.0 1388000.0 1064900.0 1262500.0 1672800.0 1496000.0 True False 1195394.645088949 1476011.6526520515 1202735.1619039213 1087921.941293333 1185700.7864075212 1379336.9771475417 1172550.4844224637 1258120.6821697163 1369061.6878563652 1482746.6038703888 0.8062029223123022 0.9954577867851748 0.811153543541723 0.7337207439582383 0.7996651506821909 0.9302580586238278 0.7907962704900315 0.8485068715623187 0.9233281561952166 1.0 20.499840636721988 -7.964138079128322 2.599115806377302 0.9990812136399583 0.8397680836855522 0.3506537848522906 0.07049465079768824 0.3040918712603645 4.653421312249427 0.07014556758321935 0.01908605698612009 1.086080261508099e-08 7.964138079128322 -0.15931312995440605 AVTPSS(ph)EAK ddPTM_KYSE-520_SHP099_60min_R1 1 AVTPSSEAK 9 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5 Q99700 ATXN2 Ataxin-2 1 AVT(0.125)PS(0.329)S(0.546)EAK 138.22 0.00044683 990070000.0 1407800.0 1709200.0 1369100.0 896510.0 1201600.0 1645300.0 1112000.0 1605700.0 1910100.0 1742200.0 True False 1329706.527620276 1627087.4664384972 1457354.3766374514 981714.0408544411 1296159.083831221 1635031.0724069516 1224411.8120741646 1600130.2014731963 1563273.9897025633 1726765.4634110886 0.770056244345741 0.9422747332601352 0.8439793402854856 0.5685277251927096 0.7506283344761606 0.9468750140375619 0.7090782379069801 0.9266633109005236 0.9053192357776482 1.0 20.71964071255479 -7.3734344897074005 7.00008145233244 0.9401708395836895 0.7942707598191447 0.3047392569483375 0.10640918774497217 0.3727641745949741 20.6282821627193 0.06217047975523466 0.029490425732448165 4.2321934458737763e-08 7.3734344897074005 -0.14590007976454478 AVTT(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 2 AVTTPGK 7 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AVT(0.021)T(0.979)PGK;AVT(0.025)T(0.975)PGK 131.62 0.009364299999999999 4507600000.0 13764300.0 15924500.0 12279300.0 12124500.0 11614900.0 16050500.0 16387900.0 11497800.0 17263400.0 19132400.0 True False 13000766.840548217 15159463.11683817 13070843.325574664 13276808.83463615 12528926.550259026 15950322.875869323 18044548.862491198 11457916.81540669 14128801.734899333 18962901.82078198 0.685589524399705 0.799427390391511 0.6892849759549964 0.7001464733675792 0.6607072413636725 0.8411330199679098 0.951571074566007 0.6042280302716979 0.7450759313332087 1.0 24.176676415479232 -6.268586445152924 24.897315899556105 0.8113639564696425 0.710795869249047 0.23488274600803472 0.1072394956415127 1021.9854016142365 3560149.5155784213 0.038119132982661084 0.034306878850513964 5.387825914681841e-07 6.268586445152924 -0.10056808722059551 AVTT(ph)PGKK ddPTM_KYSE-520_SHP099_60min_R1 6 AVTTPGKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 AVT(0.132)T(0.868)PGKK;AVT(0.004)T(0.996)PGKK;AVT(0.164)T(0.836)PGKK;AVT(0.026)T(0.974)PGKK;AVT(0.371)T(0.629)PGKK;AVT(0.007)T(0.993)PGKK 132.01 0.0009202 37385900000.0 52501100.0 47091300.0 33478100.0 34266800.0 36181800.0 53486400.0 46876500.0 35249300.0 49065700.0 70594600.0 True False 49588759.32465183 44828963.2625176 35636151.892853886 37523506.36931091 39029101.81371881 53152571.53782726 51615234.090552665 35127028.40554848 40156605.72564215 69969186.76576763 0.708722819527082 0.6406957881701454 0.5093120777886309 0.5362861582903126 0.5578041366176599 0.7596568431724593 0.7376852079665069 0.5020356821230678 0.5739184286945113 1.0 26.060216387880608 -6.243031654340551 24.102627963716937 0.6849755946606356 0.5858198279359005 0.15835522363735988 0.13438939684136683 1226.8637008220915 1606425.1053811053 0.04477620810891703 0.04467939970074971 5.714369849334744e-07 6.243031654340551 -0.09915576672473514 AVTTVTQSTPVPGPSVPPPEELQVS(ph)PGPR ddPTM_KYSE-520_SHP099_60min_R1 5 AVTTVTQSTPVPGPSVPPPEELQVSPGPR 29 0 P51610-2;P51610;H7C1C4 P51610-2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR;AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR;AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR;AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR;AVTTVTQSTPVPGPSVPPPEELQVS(1)PGPR 127.78 7.5102e-05 3975070000.0 849170.0 1208040.0 902430.0 751590.0 793089.0 1207630.0 868390.0 1120040.0 1168240.0 1275750.0 True False 802064.8473215724 1150003.9450949912 960602.0817390517 823020.8876262258 855500.592240862 1200092.7332223956 956175.3358696799 1116154.8426593014 956117.0649338354 1264447.8475184802 0.6343202283080719 0.9094910061746803 0.7597008319673005 0.6508935020463129 0.6765803697794335 0.9491041766393264 0.7561999000166001 0.8827211378071396 0.7561538159207168 1.0 20.27007610321889 -6.250331810604455 24.946535893763294 0.8544661358597033 0.7340579540197757 0.32714091793384303 0.10092487901050429 1028.5619393041086 2310052.7858330905 0.033128171277759924 0.03281749961446267 5.619118480471084e-07 6.250331810604455 -0.12040818183992763 AVVIVDDR ddPTM_KYSE-520_SHP099_60min_R1 1 AVVIVDDR 8 0 P23246;P23246-2;Q15233-2;Q15233;H7C367;C9IZL7 P23246;Q15233-2 SFPQ;NONO Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein 0 112.37 0.0079931 403490000.0 388380.0 517470.0 490380.0 275890.0 450220.0 536970.0 369090.0 454740.0 536890.0 495590.0 False True 366835.7871836643 492609.9644616946 521990.6794357414 302110.5026506468 485649.7525986129 533618.5710510925 406401.2191712718 453162.613077114 439404.3098955073 491199.4581631862 0.7468163514581772 1.002871555078222 1.0626857802076926 0.6150464900355808 0.9887017270228144 1.086358224104176 0.8273649582004572 0.9225633407082554 0.894553734930075 1.0 18.905949443724474 AVVMPLQLIQEQAAS(ph)PNAEIHILK ddPTM_KYSE-520_SHP099_60min_R1 4 AVVMPLQLIQEQAASPNAEIHILK 24 0 H3BRB3;Q14807-2;Q14807;I3L306 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 AVVMPLQLIQEQAAS(1)PNAEIHILK;AVVMPLQLIQEQAAS(1)PNAEIHILK;AVVMPLQLIQEQAAS(1)PNAEIHILK;AVVMPLQLIQEQAAS(1)PNAEIHILK 331.69 1.3432999999999997e-72 514210000.0 358764.0 589932.0 441150.0 378899.0 385333.0 484440.0 345022.0 464589.0 567493.0 422517.0 True False 338862.64574169647 561590.7812140147 469587.23486495693 414909.44703986164 415656.5148551402 481416.4302661064 379900.19085022726 462977.4491948878 464450.5765343577 418773.82809325145 0.8091781840441076 1.3410360044968264 1.1213385444908712 0.9907721524265616 0.9925560934590757 1.1495857619805836 0.9071727155920357 1.1055548798331143 1.1090725956994023 1.0 18.67581175610399 -5.238744366429405 23.127819024372837 1.0382921682110091 1.1155694551878983 0.021890189365430635 0.13772182458651477 961.6005394152096 979932.01831162 0.03568893674336383 0.06173476104112786 5.771060584787098e-06 5.238744366429405 0.07727728697688918 AVVS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 6 AVVSPPK 7 0 P49792;Q7Z3J3;J3KNE0;A6NKT7;A0A1W2PNU4;A0A286YES2;F8VYC4;P0DJD0;P0DJD1;J3KQ37;H7BZ48;Q99666;O14715 P49792;Q99666 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2;RGPD8;RGPD6;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 AVVS(1)PPK;AVVS(1)PPK;AVVS(1)PPK;AVVS(1)PPK;AVVS(1)PPK;AVVS(1)PPK 82.287 0.012162000000000001 7925660000.0 5470080.0 6107350.0 4259090.0 3967790.0 4389290.0 6350630.0 4817020.0 6178630.0 6271230.0 6333730.0 True False 5166643.758065867 5813943.738680762 4533637.75618495 4344887.568640434 4734702.151356143 6310993.362523416 5303971.391184805 6157197.774633088 5132532.716843309 6277618.07976737 0.8230261370499506 0.9261384915114508 0.7221907574780263 0.6921235910550078 0.7542195289987437 1.0053165519679532 0.8449018917349229 0.9808175165159547 0.8175923816368111 1.0 22.581785829657694 -6.247478988866341 24.912049050316206 0.923225279066837 0.7829749030086631 0.43857502839801843 0.08253395093644654 800.3133265689668 1428144.705752475 0.028142407125980817 0.028005676937938772 5.656151208432995e-07 6.247478988866341 -0.14025037605817392 AVVS(ph)PPKFVFGSESVK ddPTM_KYSE-520_SHP099_60min_R1 3 AVVSPPKFVFGSESVK 16 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;A0A1W2PNU4;A0A286YES2;F8VYC4;P0DJD0;P0DJD1 P49792 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 AVVS(1)PPKFVFGSESVK;AVVS(1)PPKFVFGSESVK;AVVS(1)PPKFVFGSESVK 194.08 1.9045e-12 14290380000.0 6758680.0 8180150.0 5961620.0 4818870.0 5067650.0 7118470.0 5294740.0 6380230.0 8593550.0 7153690.0 True False 6383762.547305445 7787163.315344517 6345915.5641292585 5276853.9559539035 5466445.224015719 7074040.988267633 5829983.9908826975 6358098.471286876 7033177.945766432 7090313.872086609 0.9003497817546923 1.0982818893252793 0.8950119386268748 0.7442341835850178 0.7709736582376429 0.997704913475969 0.8222462497512809 0.8967301851498644 0.9919416929418159 1.0 22.75741806303438 -9.525424853950126 12.891372807315548 0.9999982603112793 0.8993413675499188 0.07609363772755273 0.10214415414728026 0.0 0.0 0.10494658234500867 0.025453284944473673 2.982463559470879e-10 9.525424853950126 -0.10065689276136047 AVVSPPKFVFGS(ph)ESVK ddPTM_KYSE-520_SHP099_60min_R1 1 AVVSPPKFVFGSESVK 16 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;A0A1W2PNU4;A0A286YES2;F8VYC4;P0DJD0;P0DJD1 P49792 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 AVVS(0.109)PPKFVFGS(0.707)ES(0.183)VK 55.196000000000005 0.047859 241430000.0 684860.0 772350.0 636950.0 513880.0 557340.0 762100.0 518140.0 691650.0 875790.0 690300.0 True False 646869.4505654371 735245.1466790155 678008.8161560341 562719.0006963441 601199.4871691848 757343.4512133583 570518.6477590902 689250.8275823238 716768.6128692767 684184.4790452726 0.9454605744171429 1.074629970713446 0.9909736875384018 0.8224667731158937 0.8787096252287293 1.1069287223091842 0.8338666912690063 1.0074049451459655 1.047624777851542 1.0 19.384025850892233 -7.5028047746098565 24.50465795411931 1.0250465975354577 0.9526460200504444 0.11206292267776863 0.08823986581566658 1312.0530677853103 1601659.0329815845 0.050515841355335524 0.023729231124767672 3.141920742345849e-08 7.5028047746098565 -0.07240057748501327 AVVVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 AVVVSPK 7 0 G3V5E1;O75909-1;O75909 G3V5E1 CCNK Cyclin-K 1 AVVVS(1)PK;AVVVS(1)PK;AVVVS(1)PK;AVVVS(1)PK;AVVVS(1)PK 107.21 0.0035626999999999994 29393900000.0 85427900.0 79461800.0 67423700.0 59216100.0 64618200.0 75546800.0 68610500.0 77523100.0 82699500.0 76639900.0 True False 80689044.09070343 75644335.85340652 71769939.58373423 64843980.340030305 69703284.71273522 75075284.3985374 75546318.913952 77254190.46012764 67683355.48474264 75960930.11094001 1.0622440243011515 0.995832143483879 0.9448270246153531 0.8536491094214679 0.917620210954953 0.9883407731960477 0.9945417835671249 1.0170253358838397 0.8910285246098478 1.0 26.178754235025767 -9.176500687028108 15.196645193602263 1.0000009051660954 0.9619753873964877 0.034205797942123195 0.05917412263741899 0.0 0.0 0.06110782307193831 0.014820824063362211 6.660384676642432e-10 9.176500687028108 -0.03802551776960772 AVVVS(ph)PKEENK ddPTM_KYSE-520_SHP099_60min_R1 13 AVVVSPKEENK 11 1 G3V5E1;O75909-1;O75909 G3V5E1 CCNK Cyclin-K 1 AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK;AVVVS(1)PKEENK 172.1 7.2012e-06 26269080000.0 32328660.0 32630890.0 31441880.0 19780390.0 23653420.0 26232850.0 19606100.0 22475920.0 39892540.0 25441740.0 True False 30535324.784214042 31063253.06443556 33468673.893586725 21660312.318408865 25514809.58445 26069121.05256838 21588075.92509648 22397956.279439148 32649060.345096603 25216345.97697422 1.2109337654272645 1.2318697202521065 1.3272610521821022 0.858979026469082 1.0118361164519363 1.0338183445124387 0.8561143610897939 0.888231637521605 1.2947577882580374 1.0 24.587855898528392 -5.254638373129944 24.99912412934621 0.9842171773891836 1.2542063431689399 0.49628733578541395 0.12203452849176516 443.98914577629114 1632010.2841787196 0.03303063851098709 0.05560393004921238 5.563673385313479e-06 5.254638373129944 0.2699891657797563 AWEEYYK ddPTM_KYSE-520_SHP099_60min_R1 6 AWEEYYK 7 0 A0A087WTP3;Q92945;M0R3J3;M0R251;M0QYG1;M0R263;M0R0C6;E9PEB5;Q96AE4;Q96AE4-2 A0A087WTP3;E9PEB5 KHSRP;FUBP1 Far upstream element-binding protein 2;Far upstream element-binding protein 1 0 ;;;;; 148.07 0.010668 6279050000.0 7136030.0 6031720.0 4194140.0 4484390.0 6668580.0 6759160.0 5498240.0 5375480.0 5058450.0 5672580.0 False True 6740180.190576866 5741947.117403701 4464500.975261268 4910585.0773189785 7193359.306970049 6716973.5752569055 6054055.756851314 5356833.714526463 4139962.9931474403 5622325.354400461 1.1988242881215487 1.0212762078789366 0.7940666350386516 0.8734082017284147 1.2794277907343048 1.1946967049851873 1.076788583946489 0.9527790330265744 0.7363435468755272 1.0 22.422735511765037 -7.4946545735582175 5.098822173942202 0.8595214953929464 1.0551162745709939 0.21346369816637722 0.15113688393914693 0.3033783589714638 21.68347369354067 0.10265478012311231 0.04352127820026514 3.201440439082398e-08 7.4946545735582175 0.19559477917804746 AWGPGLEGGVVGK ddPTM_KYSE-520_SHP099_60min_R1 1 AWGPGLEGGVVGK 13 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 182.28 5.7688e-07 240510000.0 275690.0 346730.0 206610.0 244710.0 270210.0 383390.0 306630.0 269810.0 273300.0 240120.0 False True 260396.92612561 330072.57034765923 219928.4111876882 267967.1648252556 291473.989715408 380997.1207987003 337627.1528204151 268874.0920841272 223675.60933234412 237992.72361053302 1.0941381827779773 1.386901941119056 0.9240972070540844 1.1259468808961348 1.224718072441556 1.6008771823721346 1.4186448547600574 1.1297576161367457 0.9398422184469035 1.0 17.860557939686522 -7.557920345856713 4.865471976595394 0.9801018629520772 1.255073240472744 0.28576784452505133 0.17869407931551515 0.27937051666817153 16.035827589737224 0.13730308982881534 0.050542762061326345 2.7674491779462113e-08 7.557920345856713 0.2749713775206668 AWGPGLHGGIVGR ddPTM_KYSE-520_SHP099_60min_R1 1 AWGPGLHGGIVGR 13 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 127.83 9.169399999999999e-05 711530000.0 902340.0 756650.0 708860.0 634430.0 862530.0 793150.0 627580.0 749560.0 814630.0 710910.0 False True 852285.4014298059 720299.3982451947 754554.2498161012 694726.0364516645 930406.2038756186 788199.6566459461 691021.9109905625 746959.9513086191 666713.7271511431 704611.8904796109 1.2095813495989651 1.022264040640736 1.0708792457398013 0.9859697882458138 1.3204520338740176 1.118629514056936 0.9807128155617726 1.0601012577295326 0.9462141303027523 1.0 19.426469295269158 -6.755386021533097 24.847869358298606 1.0017654830607656 1.1174042466013112 0.30308484612679554 0.09227845172712536 193.34489645624373 793646.6314117475 0.03687557465262099 0.02781357146218639 1.7563617822942174e-07 6.755386021533097 0.11563876354054559 AWLDEDS(ph)NLSPS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 1 AWLDEDSNLSPSPLR 15 0 B8ZZ93;B8ZZH7;F8WCL7;J3KQ70;Q9C086 B8ZZ93 INO80B;INO80B-WBP1 INO80 complex subunit B 2 AWLDEDS(0.887)NLS(0.118)PS(0.995)PLR 56.768 0.042743 0.0 74787.0 47686.0 37826.0 38178.0 51508.0 33877.0 37560.0 41132.0 64736.0 32468.0 True False 70638.41602581172 45395.09298185475 40264.32448373989 41806.42564136575 55561.38655956942 33665.56107696492 41356.93135027489 40989.32269228098 52981.57426175861 32180.35877972178 2.195078572906527 1.4106459562054399 1.2512080663660021 1.299128637052666 1.7265620604137275 1.0461524468204197 1.2851606668952262 1.2737372809562988 1.64639476596341 1.0 14.97389279034791 -4.26386123030504 4.0606278267836355 1.328886575133163 2.268265405011135 0.5988430351385753 0.21426915695118953 0.1516556516626092 5.394660910091701 0.05187729912373123 0.4175009864789772 5.446766650469415e-05 4.26386123030504 0.9393788298779717 AWLDEDSNLSPS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 9 AWLDEDSNLSPSPLR 15 0 B8ZZ93;B8ZZH7;F8WCL7;J3KQ70;Q9C086 B8ZZ93 INO80B;INO80B-WBP1 INO80 complex subunit B 1 AWLDEDSNLS(0.001)PS(0.999)PLR;AWLDEDSNLS(0.001)PS(0.999)PLR;AWLDEDSNLS(0.001)PS(0.999)PLR;AWLDEDSNLS(0.001)PS(0.999)PLR;AWLDEDSNLS(0.009)PS(0.991)PLR;AWLDEDSNLSPS(1)PLR;AWLDEDSNLSPS(1)PLR;AWLDEDSNLSPS(1)PLR;AWLDEDSNLS(0.008)PS(0.992)PLR 356.01 2.2665999999999998e-67 2929205000.0 2652850.0 2788700.0 2535859.0 2188883.0 2363250.0 2517890.0 2365960.0 2614460.0 3074650.0 2597420.0 True False 2505691.122174633 2654726.6660759617 2699324.5286578545 2396913.7822083295 2549224.3299468528 2502174.9145461256 2605134.326344417 2605391.048479552 2516371.065619067 2574408.879562179 0.9733073646796804 1.031198535380845 1.0485220704789207 0.9310540377781654 0.990217346663437 0.9719415336120429 1.0119349521461654 1.0120346729547647 0.977455867867818 1.0 21.295809776600652 -10.224367752258688 13.55258171575614 0.9999974002927816 0.9952912439323488 0.0019042473623585021 0.03190450370352775 0.0 0.0 0.031551911424219384 0.0076524625583640656 5.965299425132184e-11 10.224367752258688 -0.004706156360432812 AWNDIKK ddPTM_KYSE-520_SHP099_60min_R1 2 AWNDIKK 7 1 P36578;H3BM89;H3BTP7 P36578 RPL4 60S ribosomal protein L4 0 ; 116.73 0.0065789 4260900000.0 8689300.0 7800400.0 5899000.0 4896200.0 8861700.0 8033100.0 5717700.0 6944800.0 7602800.0 6383300.0 False True 8207287.20730989 7425657.075360903 6279258.978733714 5361533.375903798 9559065.373824187 7982962.44317286 6295700.915374506 6920710.109728513 6222323.170991379 6326748.9281322565 1.2972361161378967 1.1736923907857775 0.9924937831518214 0.8474389353532632 1.5108969049363168 1.2617795543736774 0.9950925802318955 1.0938809471251774 0.9834945627956655 1.0 22.59303291413764 -6.776481738109249 24.970140047745367 1.0259404016890545 1.1715970554756057 0.18053955623091433 0.16859578856260293 525.9967012494234 873140.5142605916 0.07596373829082498 0.05143930785602311 1.673085987444806e-07 6.776481738109249 0.14565665378655113 AWNPFR ddPTM_KYSE-520_SHP099_60min_R1 1 AWNPFR 6 0 M0R2U2;M0R1H0;M0R2B0;M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087 M0R2U2 FBL rRNA 2-O-methyltransferase fibrillarin 0 109.94 0.068178 1098300000.0 781230.0 760830.0 572080.0 489540.0 826220.0 769070.0 590420.0 637920.0 629600.0 639240.0 False True 737893.6145566045 724278.5847708872 608957.1921603638 536065.7344144322 891238.8134512578 764269.9488579693 650105.4155439101 635707.2044116467 515280.5109244189 633576.8309211949 1.1646474090344139 1.1431582555154607 0.9611418259644452 0.8460942828907024 1.4066783536819567 1.206278246865107 1.0260877352454372 1.0033624548539035 0.8132881219397213 1.0 19.273160053341932 -7.27331190466708 2.435188130151393 0.9139049935325338 1.113453327614309 0.23575582107474602 0.1472512062821497 0.4886705980154596 5.573727510090913 0.10490678937565927 0.044824412542623086 5.329519987915592e-08 7.27331190466708 0.1995483340817752 AWRET(ph)LT(ph)LQKQLRY(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 AWRETLTLQKQLRYR 15 3 Q9UJJ7;H3BS55;H3BUN6;H3BU91;H3BRG3 Q9UJJ7 RPUSD1 RNA pseudouridylate synthase domain-containing protein 1 3 AWRET(1)LT(1)LQKQLRY(1)R 41.513000000000005 0.056437 970490000.0 626240.0 525160.0 465390.0 242210.0 475190.0 480250.0 495290.0 462760.0 584520.0 401340.0 True False 591501.2188215106 499930.52531876904 495389.7840503277 265229.56557690835 512584.74953874684 477252.58161030826 545358.7467645803 461154.7935689965 478385.9025500977 397784.4398377953 1.4869893328726163 1.2567875342801893 1.2453724541169409 0.666767070338551 1.2885992970156492 1.19977689877693 1.3709906475652025 1.1593082770081247 1.2026259819141476 1.0 18.601627317707756 -1.0000111275094716 0.01736531261872064 1.0590341387255105e-06 2.6585338565967893 0.09074528348242139 0.2021042727907622 14641.9716846297 19.659032910694254 1161.3022889161812 1940.635733861761 0.099997437829081 1.0000111275094716 2.6585327975626507 AWVESR ddPTM_KYSE-520_SHP099_60min_R1 2 AWVESR 6 0 Q9HB71-3;Q9HB71 Q9HB71-3 CACYBP Calcyclin-binding protein 0 ; 116.0 0.064283 863590000.0 1525480.0 1602550.0 1102230.0 1016080.0 1667520.0 1538550.0 1186030.0 1326970.0 1265940.0 1336780.0 False True 1440858.583431011 1525561.0925234084 1173281.5094303538 1112647.9377044092 1798744.3371090542 1528947.3387538558 1305925.4869373406 1322367.0507871276 1036077.2077504119 1324937.1691991014 1.0874920086225537 1.1514214620800323 0.8855374705349836 0.8397741142525145 1.3576072729519393 1.1539772408061242 0.9856508801294683 0.9980601960064813 0.7819821436337999 1.0 20.337492515540294 -7.301296072217231 2.3336392738491827 0.8985890759682604 1.0724879764957576 0.17946524602900282 0.14686198114043597 0.5795280111459097 5.998694393030603 0.10859070309980813 0.04449548247019543 4.996937618675499e-08 7.301296072217231 0.17389890052749712 AWVWNTHADFADECPKPELLAIR ddPTM_KYSE-520_SHP099_60min_R1 1 AWVWNTHADFADECPKPELLAIR 23 1 P43487-2;P43487;F6WQW2;C9JXG8;C9JGV6;C9JJ34 P43487-2 RANBP1 Ran-specific GTPase-activating protein 0 269.11 1.4434e-37 1226200000.0 479700.0 395530.0 301980.0 385130.0 620700.0 469770.0 327950.0 247430.0 336270.0 285220.0 False True 453090.08474175754 376528.1450973666 321446.11398508353 421732.63940644276 669545.5587000992 466837.99117766693 361102.3864835638 246571.72308059628 275211.84467686544 282693.17269780225 1.6027627424384558 1.3319322200252552 1.1370848150220734 1.4918387854285857 2.3684532325647654 1.6513946436078761 1.2773650776121879 0.8722238345111375 0.9735355192715095 1.0 18.10887751560391 -7.009535456529681 3.443413408059844 0.9487978003721762 1.5919285271281205 0.48373386422999753 0.3006848875998486 0.24076491563795233 6.004657458506834 0.1668665824097002 0.09796722919045185 9.782830828530358e-08 7.009535456529681 0.6431307267559443 AY(ph)TNFDAER ddPTM_KYSE-520_SHP099_60min_R1 1 AYTNFDAER 9 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 AY(0.955)T(0.045)NFDAER 101.46 0.0054874 1984600000.0 1936900.0 1494300.0 1563200.0 1314400.0 1767000.0 1582500.0 1245000.0 1261900.0 1683100.0 1453300.0 True False 1829456.2958855743 1422511.5850099728 1663966.3732084348 1439320.1808112317 1906052.8471452822 1572623.0305014302 1370856.7500290805 1257522.7634296753 1377491.4674982373 1440424.89265029 1.2700810054174303 0.9875638724853207 1.1551913478437899 0.9992330652957367 1.3232573644560297 1.0917771822228814 0.9517030405568676 0.8730220991362581 0.9563091241527636 1.0 20.45806300606221 -6.727160259066792 4.204872148359998 0.9323063034169102 1.1367233539687225 0.4663086191952208 0.10161713721219923 0.18442817370244924 7.12538464553352 0.04050465590223509 0.02940468348779055 1.874302743726728e-07 6.727160259066792 0.20441705055181225 AYEKPPEKK ddPTM_KYSE-520_SHP099_60min_R1 2 AYEKPPEKK 9 2 B4DY09;Q12905 B4DY09 ILF2 Interleukin enhancer-binding factor 2 0 ; 69.01 0.016328 4148300000.0 6768200.0 6302100.0 4895400.0 4495500.0 7055100.0 6015100.0 4673900.0 5647800.0 6111800.0 5001300.0 False True 6392754.453927804 5999337.65635504 5210965.31691694 4922750.968378636 7610296.231972074 5977557.529711945 5146383.424868205 5628209.100006429 5002051.185940071 4956992.372952526 1.2896437946544785 1.21027776622978 1.0512352904455127 0.9930923023483501 1.5352648661509165 1.2058839473564775 1.038206847553181 1.135408061290622 1.0090899500336947 1.0 22.24103360833979 -6.755493412239287 22.96754191518514 1.0569601963962767 1.211184806340686 0.25612081993183256 0.14014370996190745 87.11241673831285 336493.5959298681 0.057792290141861435 0.04345692135894287 1.7559275294504366e-07 6.755493412239287 0.15422460994440934 AYGVPVKPMT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 AYGVPVKPMTPK 12 1 H3BT74;F8W872;Q15131-4;Q15131-3;Q15131-2;Q15131 H3BT74 CDK10 Cyclin-dependent kinase 10 1 AYGVPVKPMT(1)PK;AYGVPVKPMT(1)PK;AYGVPVKPMT(1)PK 132.06 0.00018708 2480340000.0 3283230.0 3133230.0 2587390.0 2299950.0 2316030.0 3382780.0 2147160.0 2937390.0 3638340.0 3214950.0 True False 3101102.6869432623 2982704.927725887 2754177.299370371 2518536.5564948195 2498288.3845919007 3361666.815241469 2364215.887062198 2927200.87968198 2977709.1710876003 3186468.044193252 0.9732100381783046 0.9360536137060325 0.8643354526618741 0.7903850035729642 0.7840305786667369 1.0549821208367316 0.7419549966523417 0.9186349397152316 0.9344858099279935 1.0 21.603526761938316 -7.934264139810726 2.2346778558791134 0.9970445456957621 0.8778315581716819 0.14666065563665776 0.08952872873811574 0.546540324501474 6.025834869366444 0.08533418462206817 0.02370407478913196 1.1634182181169273e-08 7.934264139810726 -0.11921298752408016 AYHEQLSVAEITNACFEPANQMVK ddPTM_KYSE-520_SHP099_60min_R1 2 AYHEQLSVAEITNACFEPANQMVK 24 0 P68363;P68366-2;P68366;P68363-2;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2;C9JDS9 P68363;Q71U36-2 TUBA1B;TUBA4A;TUBA1A;TUBA3E Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain 0 ; 228.01 2.1127e-26 846560000.0 878490.0 869510.0 464286.0 1045390.0 676260.0 638600.0 700850.0 799060.0 543900.0 423472.0 False True 829758.4084736019 827737.4344388808 494214.6184438659 1144743.5512920343 729477.8146069429 634614.2605233571 771698.7576368523 796288.2473620063 445141.47060322657 419720.36753623013 1.9769314826066366 1.9721164338479016 1.1774854323723174 2.727395761162866 1.7380090913600341 1.5119930067929748 1.8386021201847906 1.8971875299648664 1.0605667607131362 1.0 18.6790689482171 -7.765364886428487 21.12542748695254 1.0302781896642383 1.849492433662221 0.4400852143966463 0.3720412673576807 13.535077392702146 72799.94732421356 0.30650394493575717 0.09182547327233814 1.7164656375366973e-08 7.765364886428487 0.8192142439979826 AYQHGGVTGLS(ph)QY ddPTM_KYSE-520_SHP099_60min_R1 4 AYQHGGVTGLSQY 13 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 1 AYQHGGVTGLS(1)QY;AYQHGGVTGLS(1)QY;AYQHGGVT(0.001)GLS(0.998)QY;AYQHGGVTGLS(1)QY 116.96 0.000121 1680330000.0 2995840.0 2846000.0 2729180.0 2513740.0 2504720.0 2683630.0 2469770.0 2630730.0 2970010.0 2740740.0 True False 2829654.7831410184 2709273.888066908 2905107.3096423927 2752645.0938165085 2701827.2140926556 2666880.4697279953 2719438.4542323835 2621604.6116469996 2430731.05185933 2716459.175863452 1.0416702773534545 0.9973549067623075 1.0694463349404018 1.0133209872154822 0.994613590404448 0.9817487755472352 1.0010967506507749 0.9650815425244512 0.8948159697952021 1.0 21.373295935044286 -6.4005718146638335 0.8397503680434341 0.9525338937704025 1.032958109572707 0.47587669285789513 0.03174155149677819 0.5401136048108857 0.8073285266958741 0.02189686154829636 0.01792959292261431 3.9758334690504486e-07 6.4005718146638335 0.08042421580230441 AYQQKPYPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 AYQQKPYPSPK 11 1 A0A2R8YDI1;A0A2R8Y852;P39880-6;P39880-4;P39880-5;P39880-2;P39880;P39880-3 A0A2R8YDI1 CUX1 Homeobox protein cut-like 1 1 AYQQKPYPS(1)PK;AYQQKPYPS(1)PK 118.51 0.00015836 2706400000.0 3640400.0 3297100.0 2988100.0 2941900.0 2804800.0 3200500.0 3107900.0 3130400.0 3714900.0 2982900.0 True False 3438459.755042521 3138702.366952006 3180717.7071290454 3221497.291485515 3025521.8028710173 3180524.4923348012 3422076.862181026 3119541.373040854 3040367.8050081423 2956473.8266610843 1.1630272942161544 1.0616371227939205 1.075848424040071 1.089641742279091 1.0233548410228657 1.0757830709182195 1.157485931829058 1.0551560933532536 1.0283763642994277 1.0 21.49544607446211 -13.999999999436923 0.11296215440917443 0.7325835026756381 1.125402655979196 0.325214533414792 0.041698778508741444 226.7331687286067 1.6877545004421484 13.862760207679537 0.5073328716518989 1.000000001296532e-14 13.999999999436923 0.392819153303558 AYRPPS(ph)GEK ddPTM_KYSE-520_SHP099_60min_R1 7 AYRPPSGEK 9 1 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 AYRPPS(1)GEK;AYRPPS(1)GEK;AYRPPS(1)GEK;AYRPPS(1)GEK;AYRPPS(1)GEK;AYRPPS(1)GEK;AYRPPS(1)GEK 125.97 0.00059851 15052490000.0 10728270.0 9115870.0 8935890.0 9447650.0 9413780.0 9056620.0 9550470.0 9380040.0 10770710.0 8967630.0 True False 10133151.476823967 8677929.922000173 9511911.76732952 10345551.815460451 10154590.92891867 9000094.275197398 10515924.711204996 9347502.8305578 8815020.571503745 8888183.774910567 1.1400699775614087 0.9763445650725747 1.07017496579893 1.1639669112899893 1.1424821072650297 1.012590930061857 1.1831353826064208 1.0516774930941226 0.9917684866492809 1.0 23.083457215980424 -7.561234207175023 5.2547099463255975 1.0007763707239934 1.0951333125036247 0.3023506147325089 0.062007226500661206 0.25649311180399437 17.474870381757356 0.043905625391579765 0.016222063320060404 2.7464126628918186e-08 7.561234207175023 0.09435694177963128 AYS(ph)FCGTVEYMAPEVVNR ddPTM_KYSE-520_SHP099_60min_R1 12 AYSFCGTVEYMAPEVVNR 18 0 B4DG22;B1AXG1;B7ZB17;P51812;Q9UK32-2;Q9UK32;E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2 B4DG22;E9PGT3 RPS6KA3;RPS6KA6;RPS6KA1 Ribosomal protein S6 kinase alpha-3;Ribosomal protein S6 kinase alpha-6;Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 1 AYS(1)FCGTVEYMAPEVVNR;AY(0.001)S(0.999)FCGTVEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(0.999)FCGT(0.001)VEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR;AYS(1)FCGTVEYMAPEVVNR 349.54 1.3780999999999998e-59 16942363000.0 2824595.0 2969896.0 2661086.0 2507395.0 2275275.0 2907507.0 2569880.0 3340284.0 3583064.0 3192992.0 True False 2667909.0846594637 2827217.738255221 2832623.86144814 2745697.066924203 2454326.197956126 2889360.1703280373 2829668.5500118295 3328697.3344321474 2932469.8992930306 3164704.5749901873 0.8430199474994395 0.8933591339292665 0.8950673891754723 0.8675998033505913 0.7755309033746811 0.9129952265250529 0.8941335543209759 1.051819294836539 0.9266172654684911 1.0 21.59363939975528 -7.082197446318113 4.282670121600879 0.991684685754756 0.8655958839641916 0.6130769486116142 0.04547923405716731 0.15463214536931646 5.1412142367686355 0.022220158461822064 0.012603799000615312 8.275658361659654e-08 7.082197446318113 -0.12608880179056436 AYS(ph)NSIVR ddPTM_KYSE-520_SHP099_60min_R1 3 AYSNSIVR 8 0 Q9H1Z4 Q9H1Z4 WDR13 WD repeat-containing protein 13 1 AYS(0.558)NS(0.442)IVR;AYS(0.993)NS(0.007)IVR;AYS(0.988)NS(0.012)IVR 153.23 0.00035294 498610000.0 700170.0 702000.0 613350.0 637630.0 640510.0 595710.0 568210.0 581860.0 657430.0 601370.0 True False 661330.1743457097 668274.8662765169 652887.5223946988 698230.1634895508 690914.4929966184 591991.9529225948 625650.211995199 579841.6634671452 538057.2844616274 596042.3296587797 1.1095355840319359 1.1211869241889056 1.095371066629549 1.171443920584082 1.1591701773801046 0.9932045485116744 1.0496741269254637 0.9728196046060873 0.9027165650628415 1.0 19.185055265896505 -6.608596456018512 1.4387451718616289 0.9617093555783519 1.1302118128913388 0.7413052312977634 0.042599222258417946 0.21321501744000862 0.8996683636636569 0.023802373647134965 0.01611942041533526 2.4626548263118313e-07 6.608596456018512 0.16850245731298685 AYS(ph)PEYR ddPTM_KYSE-520_SHP099_60min_R1 10 AYSPEYR 7 0 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;A0A3B3IT83 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 AYS(1)PEYR;AYS(1)PEYR;AYS(1)PEYR;AYS(1)PEYR;AYS(1)PEYR;AYS(1)PEYR;AY(0.001)S(0.999)PEYR;AYS(1)PEYR;AY(0.002)S(0.998)PEYR;AYS(1)PEYR 126.41 0.002231 27839620000.0 34202770.0 30806010.0 28942440.0 27073110.0 29970960.0 29674840.0 27055890.0 28225920.0 35046380.0 29734750.0 True False 32305474.166568343 29326043.038836274 30808115.991941314 29646130.234572645 32329504.040564403 29489628.31623698 29790963.401240367 28128010.87149927 28682840.839344554 29471323.248285435 1.0961663951905447 0.9950704551599117 1.0453591015372428 1.0059314264518944 1.0969817598008684 1.0006211145593067 1.0108458025539633 0.95441967890382 0.9732457751456154 1.0 24.81280850244342 -6.761752304182971 2.075738724923542 0.975235060881754 1.0420467500949864 0.42478247055075 0.03433143142288863 0.30434751748609035 2.684123226864755 0.01634626682381525 0.010513566812026446 1.730803225279363e-07 6.761752304182971 0.06681168921323233 AYS(ph)PEYRR ddPTM_KYSE-520_SHP099_60min_R1 1 AYSPEYRR 8 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;A0A3B3IT83 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 AYS(1)PEYRR 119.68 0.00062285 738950000.0 506330.0 679460.0 753480.0 339730.0 440070.0 397580.0 267990.0 265940.0 758780.0 349270.0 True False 478242.86555616837 646817.721709748 802050.5264106249 372017.8370564513 474701.00534421235 395098.55574518733 295081.04453035584 265017.51621086267 621004.6792872156 346175.73952794826 1.3815031238419808 1.8684663535109676 2.316888316622985 1.074650226973565 1.3712717303399815 1.1413236418125405 0.8524024385207752 0.7655577383101587 1.7939000582017366 1.0 18.401145096630877 -5.283457759671407 24.76100645384194 1.1303279842608234 1.856903985048335 0.4775055851260416 0.341557233852427 576.5614500680064 648377.1212961702 0.09680469924234009 0.1437196891557712 5.206456453502197e-06 5.283457759671407 0.7265760007875117 AYS(ph)PTCS(ph)PTLGFK ddPTM_KYSE-520_SHP099_60min_R1 1 AYSPTCSPTLGFK 13 0 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 2 AY(0.007)S(0.98)PT(0.152)CS(0.848)PT(0.012)LGFK 114.21 0.00014505 150050000.0 652010.0 616030.0 533160.0 559410.0 553460.0 606830.0 573910.0 674550.0 794310.0 614960.0 True False 615841.7055502891 586434.9941201184 567528.3466861612 612576.1582072505 597014.1532433664 603042.5488778409 631926.4236218381 672210.1434911537 650083.3269256279 609511.9328316409 1.0103849857200362 0.9621386596906926 0.9311193368267059 1.0050273427156282 0.979495430827395 0.9893859601341274 1.0367744905108995 1.1028662562326426 1.0665637404431154 1.0 19.217294940185518 -6.81782661369393 2.955514388654695 1.064553722167961 0.9764993781679322 0.5557375304813119 0.03162142717179017 0.17296712629373243 3.0665606672016974 0.014328277727097681 0.009413449334221887 1.5211547093426106e-07 6.81782661369393 -0.08805434400002887 AYS(ph)SPSTTPEAR ddPTM_KYSE-520_SHP099_60min_R1 1 AYSSPSTTPEAR 12 0 Q9UPU9-2;Q9UPU9-3;Q9UPU9;G3V2R1 Q9UPU9-2 SAMD4A Protein Smaug homolog 1 1 AYS(0.631)S(0.365)PS(0.004)T(0.001)TPEAR 150.51 1.8063e-05 452070000.0 311730.0 332000.0 272870.0 230210.0 319230.0 320540.0 289660.0 313700.0 423540.0 345540.0 True False 294437.7154816515 316050.2216578404 290459.63680743705 252089.08918483948 344351.58482976124 318539.39096172387 318941.6596091751 312611.8479181304 346635.812574537 342478.78442605195 0.8597254162037781 0.9228315330174328 0.8481098684527512 0.7360721324893355 1.005468369104521 0.9300996308298417 0.9312742105870241 0.9127918637121581 1.0121380603340195 1.0 18.385655094476892 -5.784619354957205 24.99999992222315 0.9574741067190454 0.8479397898471345 0.5566117216370908 0.053660482884668056 202.78538362263694 218706.41354892976 0.017202899658312586 0.019517968654092104 1.6420283273136555e-06 5.784619354957205 -0.10953431687191095 AYSS(ph)PSTTPEAR ddPTM_KYSE-520_SHP099_60min_R1 2 AYSSPSTTPEAR 12 0 Q9UPU9-2;Q9UPU9-3;Q9UPU9;G3V2R1 Q9UPU9-2 SAMD4A Protein Smaug homolog 1 1 AYS(0.03)S(0.764)PS(0.122)T(0.02)T(0.064)PEAR;AYS(0.016)S(0.842)PS(0.116)T(0.02)T(0.006)PEAR 174.21 1.5125e-07 716340000.0 1314090.0 1283890.0 1173640.0 933560.0 1112950.0 1313490.0 1089660.0 1190110.0 1507740.0 1265850.0 True False 1241194.80812653 1222209.9972418204 1249294.7122903946 1022285.2617149513 1200532.8331807242 1305292.0216956222 1199813.4668567763 1185981.7861837607 1233972.423032375 1254635.5538163963 0.9892871315108345 0.9741553979751788 0.9957431132014746 0.8148065456979332 0.9568777399372268 1.0403754442675701 0.9563043731760509 0.9452799122232731 0.9835305713111928 1.0 20.258836920704 -6.008469474843523 24.99923373351675 0.9819615786383246 0.9414724721261283 0.12096839453800234 0.0529979599785636 997.5518158487203 2944469.1530641075 0.017724093558197353 0.019186379733529737 9.806872412384459e-07 6.008469474843523 -0.04048910651219628 AYSSFGGGRGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 6 AYSSFGGGRGSR 12 1 Q15056-2;Q15056 Q15056-2 EIF4H Eukaryotic translation initiation factor 4H 1 AYSSFGGGRGS(1)R;AYS(0.001)S(0.011)FGGGRGS(0.988)R;AYSSFGGGRGS(1)R;AYSSFGGGRGS(1)R;AYSSFGGGRGS(1)R;AYSSFGGGRGS(1)R 109.44 0.00030839 3726830000.0 2864190.0 2548520.0 2404590.0 2180550.0 2134720.0 2193780.0 2112860.0 1961310.0 2776900.0 2124610.0 True False 2705307.6710787863 2426085.2737934906 2559593.718880034 2387788.8163937363 2302710.3191046827 2180087.8052786295 2326448.5083264597 1954506.673383197 2272684.95995238 2105787.6083215657 1.2847011067916163 1.1521034999950543 1.215504217407841 1.1339172131879633 1.0935149917327491 1.0352838038667562 1.1047878233934396 0.928159452387058 1.0792564981251083 1.0 21.00592850147441 -5.221406127190306 0.45603287911845064 0.9973268902537401 1.3171100711325372 0.7379463035130125 0.05001547745154482 1.085190356215361 0.32411143042194296 0.0387809652719271 0.17295465527624868 6.006118172017128e-06 5.221406127190306 0.3197831808787971 AYT(ph)HQVVTR ddPTM_KYSE-520_SHP099_60min_R1 7 AYTHQVVTR 9 0 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 CDK7 Cyclin-dependent kinase 7 1 AYT(1)HQVVTR;AYT(0.996)HQVVT(0.004)R;AYT(1)HQVVTR;AYT(1)HQVVTR;AYT(1)HQVVTR;AYT(1)HQVVTR;AY(0.033)T(0.967)HQVVTR 125.82 0.00087404 7076620000.0 6700230.0 5746770.0 6466050.0 5291770.0 5806420.0 4939210.0 4528210.0 6858230.0 6761880.0 6704930.0 True False 6328554.885322639 5470686.543122364 6882861.929045804 5794698.229771337 6263352.219989413 4908382.558283075 4985965.6578708235 6834440.400852919 5534093.045123271 6645529.536556613 0.9523025743109984 0.8232130356246984 1.0357130897069438 0.871969373982177 0.9424910664432582 0.7385991637359207 0.7502736434235016 1.0284267586589029 0.8327542620464774 1.0 22.663952731854373 -3.8437894478840677 14.20176486337232 0.888626043117203 11.484430047681533 0.029835077336086147 0.10286488803571119 1646798.203142631 395944.50230930356 0.025536471954804258 565672886.4470679 0.0001432882412593168 3.8437894478840677 10.59580400456433 AYT(ph)PPPPLGPHPNLGK ddPTM_KYSE-520_SHP099_60min_R1 2 AYTPPPPLGPHPNLGK 16 0 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 AYT(1)PPPPLGPHPNLGK;AYT(1)PPPPLGPHPNLGK 125.18 0.00013326 1129990000.0 2256600.0 2304300.0 1601790.0 1343540.0 1595560.0 2296600.0 1566790.0 2057100.0 2345100.0 2037210.0 True False 2131421.899579428 2193597.969175183 1705043.9463546162 1471229.6376499706 1721121.4945054464 2282266.0675194873 1725176.4235968376 2049964.4002307479 1919288.9551601894 2019161.904325397 1.0555973223412896 1.086390330798196 0.8444315152252598 0.7286338131173831 0.852394001104371 1.130303648573438 0.8544022249534368 1.0152550896683254 0.9505374239919729 1.0 20.94532516558171 AYT(ph)PSKR ddPTM_KYSE-520_SHP099_60min_R1 1 AYTPSKR 7 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 AY(0.002)T(0.995)PS(0.003)KR 85.161 0.0098759 0.0 493460.0 455670.0 379360.0 357080.0 390540.0 385050.0 366900.0 380370.0 422150.0 376550.0 True False 466086.7901118777 433778.9292253859 403814.15259746107 391016.7758399834 421273.2761313623 382646.7601229551 403989.8325989312 379050.58524902526 345498.20153548836 373214.05995146744 1.2488457433047604 1.1622791737315423 1.081990728457478 1.0477010857812565 1.1287711834493708 1.0252742358439397 1.082461450277264 1.0156385461424384 0.9257373679341468 1.0 18.509643811752348 -1.0000000000002052 0.285431536445896 0.9876300368856091 2.9629824515035286 0.7574557735749138 0.04275971366793272 26.997007540558638 0.38215687123902314 0.04827705546822614 26.77382978649014 0.09999999999995275 1.0000000000002052 1.9753524146179195 AYT(ph)PVVVTLWYR ddPTM_KYSE-520_SHP099_60min_R1 5 AYTPVVVTLWYR 12 0 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;P21127-5;P21127-4;P21127-12 P21127 CDK11B Cyclin-dependent kinase 11B 1 AYT(1)PVVVTLWYR;AYT(0.998)PVVVT(0.002)LWYR;AYT(1)PVVVTLWYR;AYT(0.999)PVVVT(0.001)LWYR;AYT(1)PVVVTLWYR 213.99 5.1819e-10 4604825000.0 311517.0 393818.0 355785.0 320200.0 317159.0 386050.0 301416.0 351378.0 366661.0 259675.0 True False 294236.5310162564 374898.3921471309 378719.47037612775 350631.7117283593 342117.6089121391 383640.5187520235 331886.0708166783 350159.15173024184 300084.6051716304 257374.4815240928 1.1432234045655105 1.4566261189807845 1.4714724946057867 1.3623406238723659 1.3292600217637098 1.4905926822279425 1.289506515375381 1.3605045444160069 1.165945448028186 1.0 17.973509493016056 -7.961971066363075 1.8920479772625671 0.9988167005019881 1.3749373918458714 0.597045629212334 0.09644592346204701 0.21678125269364804 1.7569699848433422 0.08926518650685235 0.025342792573547934 1.0915130529848884e-08 7.961971066363075 0.37612069134388326 AYT(ph)PVVVTQWYR ddPTM_KYSE-520_SHP099_60min_R1 4 AYTPVVVTQWYR 12 0 Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 Q5QPR4 CDK11A Cyclin-dependent kinase 11A 1 AYT(1)PVVVTQWYR;AYT(1)PVVVTQWYR;AYT(1)PVVVTQWYR;AYT(1)PVVVTQWYR 215.87 4.6492e-10 2361700000.0 1849560.0 1987690.0 1542810.0 1570300.0 1649420.0 1969420.0 1570820.0 1755040.0 2161820.0 1794490.0 True False 1746961.219793548 1892198.3888164817 1642262.0011832805 1719540.8398720904 1779219.9700839675 1957128.119260742 1729613.8153258443 1748952.175869414 1769287.9830473743 1778592.2146920948 0.9822157127208484 1.063874210842677 0.9233493701464248 0.9667988118174534 1.0003529507138775 1.100380459946832 0.9724622659642478 0.983335112693152 0.9947687662366546 1.0 20.762304345090325 -5.994822321282826 24.798768231853387 1.0116316969012509 0.985193098537555 0.06687494358962998 0.045818683447570716 414.77202923801656 1986542.8947703256 0.014900903729344613 0.01683271444029013 1.011993396686329e-06 5.994822321282826 -0.026438598363695887 AYTHQVVT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 AYTHQVVTR 9 0 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 CDK7 Cyclin-dependent kinase 7 1 AYT(0.1)HQVVT(0.9)R 80.102 0.051820000000000005 1217400000.0 706330.0 533490.0 657220.0 568640.0 559000.0 617600.0 552220.0 553260.0 690020.0 722580.0 True False 667148.4668660536 507860.3396151841 699585.4527891794 622683.3746321504 602990.119725077 613745.3293129129 608043.7867478376 551340.870191855 564729.7619886714 716178.5033587334 0.9315393630739561 0.7091253608331178 0.9768311245147182 0.869452757534456 0.8419550669242016 0.8569725654073259 0.849011501875907 0.7698372229914429 0.7885321317802785 1.0 19.449959690158657 -7.009414958969904 23.19420434038767 0.8293956901353575 0.8608740598961343 0.0 0.08731375008452835 834.3290775759305 2055400.3485399378 0.03661308305664378 0.023123634626795828 9.785545509099206e-08 7.009414958969904 0.03147836976077678 AYTNFDAER ddPTM_KYSE-520_SHP099_60min_R1 4 AYTNFDAER 9 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;; 218.73 4.0763999999999994e-08 5879340000.0 5407500.0 6908100.0 4583820.0 3545510.0 5984100.0 7332200.0 5167980.0 5818600.0 6136000.0 6465200.0 False True 5107535.195415997 6576224.506730494 4879300.371571311 3882474.204403546 6455014.625128507 7286437.020058507 5690409.853024324 5798416.634671449 5021857.075972427 6407923.357849491 0.797065587427702 1.026264538366371 0.761447991663997 0.6058864920173624 1.0073489123775694 1.1370980289788994 0.8880271400334031 0.9048823325217495 0.7836949344627883 1.0 22.61142546177871 CAAPRPPSS(ph)SPEQR ddPTM_KYSE-520_SHP099_60min_R1 1 CAAPRPPSSSPEQR 14 1 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YEN2;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 CAAPRPPS(0.125)S(0.437)S(0.437)PEQR 129.36 2.6487e-05 1437800000.0 313190.0 284070.0 228500.0 234790.0 262500.0 279880.0 268060.0 242840.0 315630.0 240940.0 True False 295816.7263712139 270422.8508022368 243229.4756129264 257104.37100781253 283157.25657930743 278133.16510378546 295158.12081349 241997.64471928225 258319.54838480696 238805.45904848378 1.2387351928632224 1.132398111331843 1.0185256090127506 1.0766268578291318 1.1857235496522676 1.1646851215713503 1.2359772761876653 1.0133673061056379 1.0817154239860207 1.0 17.865476291157435 -7.288339967330513 24.916744783207477 1.035656002833903 1.143691332314832 0.3994191607529751 0.06628629664792346 908.499749989535 841495.6462127615 0.03904864812287765 0.01876680567463052 5.1482547950879236e-08 7.288339967330513 0.10803532948092909 CAAPRPPSSS(ph)PEQR ddPTM_KYSE-520_SHP099_60min_R1 7 CAAPRPPSSSPEQR 14 1 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YEN2;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 CAAPRPPS(0.172)S(0.186)S(0.641)PEQR;CAAPRPPS(0.004)S(0.136)S(0.86)PEQR;CAAPRPPS(0.001)S(0.013)S(0.985)PEQR;CAAPRPPS(0.007)S(0.078)S(0.915)PEQR;CAAPRPPS(0.101)S(0.185)S(0.715)PEQR;CAAPRPPS(0.054)S(0.213)S(0.733)PEQR;CAAPRPPS(0.045)S(0.236)S(0.718)PEQR 242.92 2.627e-18 10555910000.0 2833770.0 2440510.0 2601310.0 2273444.0 2508680.0 2450570.0 2322010.0 2578530.0 2941600.0 2392340.0 True False 2676575.129119553 2323264.2363198074 2768994.604843159 2489511.4342241385 2706098.8435633397 2435275.0836372143 2556741.4314337517 2569585.6812634273 2407479.591701514 2371145.7288123565 1.1288108936518964 0.9798066007033099 1.1677876105194405 1.0499192031824498 1.141262137826827 1.0270457247927054 1.078272583741344 1.0836894797480305 1.0153233360765879 1.0 21.177152901808416 -7.8193006397856015 4.36023351526072 1.001611112406483 1.0806227962989128 0.2438491563046793 0.05257055559162909 0.28505272489595945 10.276882943344965 0.0455215383096354 0.012289487197132595 1.5160005547394536e-08 7.8193006397856015 0.07901168389242974 CALGWDHQEK ddPTM_KYSE-520_SHP099_60min_R1 3 CALGWDHQEK 10 0 Q14247-3;Q14247;Q14247-2 Q14247-3 CTTN Src substrate cortactin 0 ;; 175.15 5.074e-05 2819300000.0 5212610.0 5008900.0 3318790.0 3223900.0 5398900.0 4632460.0 3744830.0 4025830.0 4027150.0 4076100.0 False True 4923456.132219578 4768264.925487825 3532724.513651752 3530298.486699122 5823762.714461035 4603547.098816215 4123393.962418796 4011865.335365785 3295921.076190081 4039988.925157809 1.2186806012165639 1.180266830880376 0.8744391579028294 0.8738386545357231 1.4415293760325218 1.139494979837449 1.0206448677969406 0.9930386963150089 0.8158242849790328 1.0 21.94591990743941 -7.188349990232417 2.286094884666161 0.9162378314349764 1.1135645093301556 0.2100222447886595 0.16138458094534425 0.5599365984166239 5.609367328105223 0.11051380355773054 0.050446272398006406 6.481119211143913e-08 7.188349990232417 0.19732667789517921 CALSS(ph)PSLAFT(ph)PPIK ddPTM_KYSE-520_SHP099_60min_R1 2 CALSSPSLAFTPPIK 15 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 2 CALS(0.151)S(0.847)PS(0.004)LAFT(0.998)PPIK;CALS(0.088)S(0.909)PS(0.004)LAFT(1)PPIK 144.29 2.1231e-05 394530000.0 903600.0 764710.0 833350.0 738570.0 706320.0 710680.0 717760.0 733690.0 924670.0 718910.0 True False 853475.506718058 727972.183746889 887069.0744071442 808763.4707408315 761903.3655889394 706244.382506639 790318.1854625478 731145.0006345337 756773.2370338043 712541.016703517 1.1977914066849893 1.0216565315983668 1.2449375595401648 1.1350412843354278 1.0692765016023797 0.9911631273859735 1.1091546548700555 1.0261093515950643 1.0620767356452296 1.0 19.44261353827392 -5.807315138917672 3.849555574797887 1.04287012217503 1.1485664168058887 0.4283066647499333 0.06127143374909263 0.22580909235607646 6.944657222581379 0.018680183492285347 0.022279181307400732 1.558421248722628e-06 5.807315138917672 0.10569629463085861 CALSS(ph)PSLAFTPPIK ddPTM_KYSE-520_SHP099_60min_R1 1 CALSSPSLAFTPPIK 15 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 CALS(0.062)S(0.929)PS(0.009)LAFTPPIK 267.07 3.9698e-25 507190000.0 505110.0 760570.0 505950.0 383640.0 441340.0 656960.0 504240.0 545610.0 714210.0 670530.0 True False 477090.5413881792 724031.0755611552 538564.346548623 420101.0302544285 476070.9471189009 652859.6689530613 555213.5001081633 543717.4062563308 584527.4677689478 664589.6258644456 0.7178723874415246 1.0894408329341478 0.8103712811467696 0.6321209569108069 0.7163382162333116 0.9823500752120125 0.8354230618420887 0.8181250279811488 0.8795314356715105 1.0 19.34210424740848 -6.257570503429844 24.989512138882265 0.8874898038296117 0.801686899031691 0.15560777560434502 0.12457222868046455 916.6395975295384 5920684.994270235 0.04480153798541853 0.0431962085988606 5.526236876515814e-07 6.257570503429844 -0.08580290479792074 CAPSAGS(ph)PAAAVGR ddPTM_KYSE-520_SHP099_60min_R1 8 CAPSAGSPAAAVGR 14 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 CAPS(0.168)AGS(0.832)PAAAVGR;CAPS(0.009)AGS(0.991)PAAAVGR;CAPSAGS(1)PAAAVGR;CAPSAGS(1)PAAAVGR;CAPS(0.132)AGS(0.868)PAAAVGR;CAPSAGS(1)PAAAVGR;CAPS(0.001)AGS(0.999)PAAAVGR;CAPSAGS(1)PAAAVGR 238.06 2.2706e-18 8853190000.0 5393880.0 5660910.0 4774440.0 4390280.0 4347000.0 5365440.0 4518100.0 5388640.0 6110890.0 5519130.0 True False 5094670.723966791 5388951.386400861 5082208.041774093 4807530.891214188 4689084.168953332 5331952.2987510925 4974833.640406727 5369948.0655580275 5001306.419000831 5470234.802018159 0.9313440662706455 0.9851407812353301 0.9290657943785321 0.878852748595092 0.857199798301778 0.974720919983901 0.9094369474910544 0.9816668314816884 0.914276370212788 1.0 22.383171329295745 -8.670096161436712 0.6086182597378361 1.001883168099761 0.9245075416673983 0.21778327072609516 0.04035352392987569 3.9335602617554546 2.222900421195604 0.0669948266295231 0.017850622751364058 2.1374887545748843e-09 8.670096161436712 -0.07737562643236273 CDCCS(ph)DDQAPQHGCNHK ddPTM_KYSE-520_SHP099_60min_R1 1 CDCCSDDQAPQHGCNHK 17 0 Q5VU43-13;Q5VU43-2 Q5VU43-13 1 CDCCS(1)DDQAPQHGCNHK 61.276 0.045675 127970000.0 35340.0 31142.0 32087.0 32621.0 40205.0 42091.0 23395.0 39236.0 47009.0 34982.0 True False 33379.619751456594 29645.891574905025 34155.37936101523 35721.29003213872 43368.90476484211 41828.29445613632 25759.994913197042 39099.899473751226 38473.35060045429 34672.086695584156 0.9627231278153163 0.8550362669311372 0.9850973107241701 1.0302607496850829 1.2508305353991165 1.2063968004978363 0.7429606166875973 1.12770540224598 1.1096347023542215 1.0 15.08148704547522 -5.126951165325933 2.8676503249262644 1.072813262013153 0.910812585275095 0.18585161474767953 0.132650698947171 0.4593838345995414 7.248844431838626 0.03954433028195899 0.07878829573163301 7.465326983008401e-06 5.126951165325933 -0.16200067673805796 CDENILWLDYK ddPTM_KYSE-520_SHP099_60min_R1 11 CDENILWLDYK 11 0 P14618;B4DNK4;P14618-3;H3BUW1;H3BTJ2;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;;;;;;;;; 197.56 3.0466e-10 6003572000.0 5587520.0 5703550.0 3873611.0 3342806.0 5011780.0 5082160.0 4283680.0 4236200.0 4304390.0 4207284.0 False True 5277569.127155033 5429542.89679691 4123310.1630567415 3660505.2771887262 5406178.572872535 5050440.354308469 4716716.179088005 4221505.610936512 3522821.280841741 4170010.7369774245 1.2656008485437156 1.302045303780786 0.9888008504374899 0.8778167511007402 1.296442362829773 1.2111336571687612 1.1311040849997553 1.0123488588416474 0.8447990911877628 1.0 21.991619667661773 -7.396580799943206 3.096495263770519 0.9229474012256846 1.1505145830477523 0.33808646394465747 0.13224274446265324 0.33745616748738777 6.028561539665247 0.09622295076750961 0.03905144202445024 4.012538385447993e-08 7.396580799943206 0.2275671818220677 CDGDASPPS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 1 CDGDASPPSPAR 12 0 F8W8D3;Q14493;E7EUV9 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 CDGDASPPS(1)PAR 165.54 2.9533999999999995e-06 476640000.0 551600.0 637970.0 715880.0 567430.0 507390.0 622150.0 476670.0 627360.0 738000.0 645500.0 True False 521001.64841266174 607320.9635875066 762026.7702484996 621358.3765959503 547318.7063458088 618266.9310751755 524856.4554508927 625183.834586925 603997.803466044 639781.3721914 0.8143432601485565 0.9492632795907936 1.1910737063793848 0.9712042325765962 0.8554777149436453 0.9663721982987211 0.8203684543880001 0.9771835532590217 0.944069067527257 1.0 19.28721946214154 -5.533723562320527 24.49677487541635 0.9218644923726053 0.9979651603015864 0.061289251342241946 0.09986379274227758 400.71371309746576 905144.4437830489 0.030273350729861672 0.039124509078863744 2.9260142555570205e-06 5.533723562320527 0.07610066792898118 CDILVQEELLAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 CDILVQEELLASPK 14 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK;CDILVQEELLAS(1)PK 302.44 1.9617999999999998e-33 6332220000.0 5364922.0 5638534.0 4372584.0 3708486.0 4243703.0 5264712.0 4398514.0 5363211.0 5908269.0 5693312.0 True False 5067319.081953136 5367650.363027921 4654447.761021769 4060939.394443026 4577658.282732869 5231852.97956224 4843158.720479847 5344607.272823858 4835476.284941082 5642873.685009715 0.8980032807423035 0.9512263897182521 0.8248364257003132 0.7196580361582264 0.81122820361785 0.9271611011709598 0.8582787761749284 0.9471428160835496 0.8569173358933263 1.0 22.427998624727863 -6.267374906394762 24.74026208637282 0.9108701069221854 0.8394765474527912 0.23813054847680393 0.06817930692173353 774.3325250791768 3227536.0261187432 0.02572318470087339 0.023279782076647982 5.402877161094732e-07 6.267374906394762 -0.07139355946939419 CDILVQEELLAS(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 2 CDILVQEELLASPKK 15 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 CDILVQEELLAS(1)PKK;CDILVQEELLAS(1)PKK 177.61 8.8967e-09 1040970000.0 1041140.0 1147670.0 920400.0 820080.0 791010.0 1130480.0 894890.0 1028120.0 1203860.0 947850.0 True False 983385.888738865 1092534.2105122108 979730.4566920688 898020.1566339575 853257.9867687541 1123424.2549897353 985354.214484756 1024553.6916850121 985269.3708409643 939452.7864161405 1.0467645665199654 1.162947437390708 1.042873543895251 0.9558970600957588 0.9082499930877788 1.1958283281860453 1.0488597497738252 1.0905856116447508 1.0487694380040178 1.0 19.841461133139223 -6.264830397124097 24.98937360067291 1.0807234114144364 1.0284397728720351 0.10328783173083511 0.07761668804931937 841.2534781165518 6199394.33986981 0.028612986771196496 0.026312623986607848 5.434625257882545e-07 6.264830397124097 -0.052283638542401256 CDNFTSSWR ddPTM_KYSE-520_SHP099_60min_R1 1 CDNFTSSWR 9 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;E9PKG0;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 103.26 0.014969999999999999 866130000.0 516620.0 694780.0 442910.0 433230.0 595640.0 555080.0 485190.0 549180.0 617990.0 483670.0 False True 487962.0587435623 661401.725913958 471460.6872810562 474404.04894465103 642513.4792719947 551615.539823529 534237.740198079 547275.0227595759 505778.5942601369 479385.06008956535 1.017891668656496 1.3796878146148022 0.9834697126209385 0.9896095820258067 1.3402868231895908 1.1506731972841802 1.1144230070462884 1.141618853656654 1.0550570644935 1.0 18.87082542290957 -7.913943170356171 2.3318248238740678 0.9996487126171806 1.1449716047433716 0.11726508183840123 0.12675599817939495 0.5970288593067516 6.977139084242857 0.11950404141099344 0.03309271828950587 1.2191491203562906e-08 7.913943170356171 0.14532289212619098 CDSWWAK ddPTM_KYSE-520_SHP099_60min_R1 2 CDSWWAK 7 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 ; 117.93 0.019877000000000002 975730000.0 1767090.0 1840450.0 983430.0 862450.0 1343320.0 1546240.0 1080370.0 1053500.0 1018790.0 1083080.0 False True 1669065.9950934185 1752032.0194282294 1046823.4713436344 944416.9886949532 1449031.6415547242 1536589.3426113953 1189584.3429951132 1049845.6543887479 833803.417605922 1073484.7538234883 1.554811085251669 1.6320977202404812 0.9751637995929677 0.8797674911834309 1.3498390511776068 1.4314030424171769 1.1081520615529068 0.9779791009135959 0.7767259056415283 1.0 20.033870270777552 -1.0000000000027498 0.4673066897993106 1.0383873462310558 16.659857130339436 0.4032415305034718 0.21968472665941013 104.99123775402344 1.2174329432765707 0.14433021105385885 1581.2594606156003 0.09999999999936683 1.0000000000027498 15.62146978410838 CDVDIRK ddPTM_KYSE-520_SHP099_60min_R1 6 CDVDIRK 7 1 P60709;A0A2R8Y793;P63261;Q562R1 P60709;P63261;Q562R1 ACTB;ACTG1;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Beta-actin-like protein 2 0 ;;;;; 82.305 0.029661 68565570000.0 68762100.0 74470500.0 49978200.0 31557700.0 50509200.0 50992400.0 31310100.0 38015900.0 56367700.0 40571400.0 False True 64947729.23915202 70892825.39750065 53199874.73994734 34556934.319831535 54483986.68196397 50674137.51692968 34475230.46512893 37884031.7158778 46132746.594082564 40211968.96007156 1.6151342726749294 1.7629782184476868 1.3229860689679758 0.8593693672186211 1.3549196443492681 1.2601754857427279 0.8573375379693811 0.9421083497178344 1.147239187414325 1.0 25.261121642960735 -4.945083893648063 4.0501503866906505 1.0698122905379874 1.6823262984223144 0.7149924472607003 0.15776218439742964 0.11499960139081103 3.909467551534942 0.044441115074993084 0.09755190083756199 1.1347915842394367e-05 4.945083893648063 0.612514007884327 CDVTDNQSEVADKTEDYLWLK ddPTM_KYSE-520_SHP099_60min_R1 1 CDVTDNQSEVADKTEDYLWLK 21 1 H3BVG0;Q8N1F7;Q8N1F7-2;H3BPA9 H3BVG0 NUP93 Nuclear pore complex protein Nup93 0 144.5 1.457e-06 343110000.0 519010.0 441620.0 276120.0 377350.0 361530.0 362180.0 352020.0 319080.0 276330.0 326590.0 False True 490219.48067921563 420403.9123148661 293919.1370076204 413213.23054558545 389980.3541756842 359919.50027615053 387605.6169841258 317973.1859538321 226155.4377124283 323696.666683175 1.5144409292265846 1.2987588553895901 0.9080079199434574 1.276544595839248 1.2047709918415248 1.1119036348571034 1.1974346877149125 0.9823183822435068 0.698664709864877 1.0 18.304282983683578 -1.0000000000000024 0.23183974438473562 0.9197548055839225 3.7958110258625597 0.47153402940189515 0.15945186622517385 50.97633132471621 0.669559098774795 0.24447396137378033 55.79932384451803 0.09999999999999944 1.0000000000000024 2.8760562202786373 CEFLPFLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 CEFLPFLSPR 10 0 Q12882 Q12882 DPYD Dihydropyrimidine dehydrogenase [NADP(+)] 1 CEFLPFLS(1)PR;CEFLPFLS(1)PR 79.82 0.01113 50393000.0 74882.0 61025.0 54630.0 53475.0 54967.0 52950.0 44047.0 51093.0 54978.0 49933.0 True False 70728.14618643378 58093.26739960754 58151.53721109053 58557.24792215497 59292.5901805516 52619.519409194814 48499.70061729388 50915.77030819583 44995.38108259643 49490.63246728614 1.4291218895451756 1.1738234995886916 1.1750008903104916 1.183198617654805 1.1980568286280169 1.0632218014990393 0.979977385606311 1.0287961129179695 0.9091696516980033 1.0 15.59486785884442 -1.0000000000012188 0.22863019362017442 0.9330865654139089 3.4205734471404434 0.8030902974723948 0.0629441748010352 22.61308892587199 0.29491745979284273 0.09714771584637799 21.017642071361557 0.09999999999971936 1.0000000000012188 2.4874868817265345 CEFQDAYVLLSEK ddPTM_KYSE-520_SHP099_60min_R1 4 CEFQDAYVLLSEK 13 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ;;; 192.63 1.5913e-07 321921000.0 536638.0 746917.0 502760.0 469015.0 703737.0 738703.0 602876.0 613723.0 691166.0 647257.0 False True 506869.6203786691 711033.9861747258 535168.7140444418 513590.044585498 759117.098184199 734092.4805690355 663820.5895827566 611594.1381570249 565667.6772769806 641522.8065383254 0.7901038204919814 1.108353403695006 0.8342161940153412 0.8005795575013832 1.1833049276617547 1.1442967780525506 1.0347575843246333 0.9533474600181459 0.8817577044989856 1.0 19.291141029377453 -5.747992939347401 24.999947421221805 1.0362397844120579 0.8958806359016143 0.2826018070030718 0.1160060920650508 357.87566532726004 665368.1367410924 0.0363695034601149 0.04667953987510971 1.7865166193626324e-06 5.747992939347401 -0.14035914851044362 CETS(ph)PPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 CETSPPSSPR 10 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72;O75335-1;B1APN9;O75335;O75335-2;M0QZB5 A0A2R8Y7R9 PPFIA1;PPFIA4 Liprin-alpha-1;Liprin-alpha-4 2 CET(0.457)S(0.543)PPS(0.291)S(0.709)PR 104.24 0.009435899999999999 0.0 291910.0 249920.0 273890.0 243170.0 256650.0 265560.0 263910.0 258280.0 313780.0 240200.0 True False 275717.1703918419 237913.46806243228 291545.38763949426 266280.8036882736 276846.894861254 263902.5415355194 290588.59831339295 257384.08696300522 256805.46175010185 238072.01487277242 1.158125076310155 0.9993340384403229 1.2246100735329957 1.118488470098328 1.1628703819270956 1.108498794688452 1.2205911663690745 1.0811186148886645 1.0786881519331062 1.0 17.861038517652624 -7.9297286136974146 1.7751239659637532 1.0035706558454405 1.137545591365753 0.3288336954451705 0.06154681155112352 0.39008948155115786 2.7388940997252975 0.05632833506106252 0.016224505617509606 1.1756319661762326e-08 7.9297286136974146 0.1339749355203126 CGGVEQASSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 CGGVEQASSSPR 12 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 CGGVEQASS(0.001)S(0.999)PR;CGGVEQASS(0.039)S(0.961)PR;CGGVEQASS(0.021)S(0.979)PR 154.13 2.1189e-05 1355050000.0 2041970.0 1965790.0 1825530.0 1680840.0 2269050.0 2284370.0 1884860.0 1911460.0 2136410.0 2623600.0 True False 1928697.8535337213 1871350.497689055 1943206.5847512726 1840586.5282370273 2447611.3258715346 2270112.399485972 2075400.0432608938 1904829.5913981157 1748491.7985134027 2600356.945129916 0.7417050405890957 0.719651392934273 0.7472845558340023 0.707820721183749 0.9412597491492654 0.8730003024152344 0.7981212145308786 0.732526199899433 0.6724045334576352 1.0 21.31027824166378 -11.454449123472621 2.3562662145070212 3.658902414891866 0.7741466276451335 0.44294306181011434 0.07713639120986525 10004603.892494632 1715579.6919197466 139811851.1280133 0.021220235676462435 3.5119706397637716e-12 11.454449123472621 -2.8847557872467324 CGLGQENS(ph)DNEHLVENEVSLLLEESDLR ddPTM_KYSE-520_SHP099_60min_R1 7 CGLGQENSDNEHLVENEVSLLLEESDLR 28 0 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1 P46100-2 ATRX Transcriptional regulator ATRX 1 CGLGQENS(1)DNEHLVENEVSLLLEESDLR;CGLGQENS(1)DNEHLVENEVSLLLEESDLR;CGLGQENS(1)DNEHLVENEVSLLLEESDLR;CGLGQENS(1)DNEHLVENEVSLLLEESDLR;CGLGQENS(1)DNEHLVENEVSLLLEESDLR;CGLGQENS(1)DNEHLVENEVSLLLEESDLR;CGLGQENS(1)DNEHLVENEVSLLLEESDLR 277.56 7.936e-42 392575800.0 263886.0 284501.0 297437.5 253057.6 237210.5 258538.0 246670.3 246018.3 314714.0 255090.7 True False 249247.71753630083 270833.1449152927 316610.79716682684 277108.1182194581 255877.6168068795 256924.36844219812 271606.14119413483 245164.91993840275 257569.87089432575 252830.79485556166 0.9858281609987114 1.0712031541490643 1.2522635834282043 1.0960220189070153 1.0120508340491452 1.0161909611879956 1.0742605201605258 0.9696798211565236 1.018744061780415 1.0 17.94781266927955 -5.721014696474982 5.650483013763519 1.0165180647287755 1.1111081920784156 0.2892469335709791 0.06568029703865387 0.24596311361657366 19.201894359891963 0.020772935052755293 0.02640090162275217 1.9010139487429134e-06 5.721014696474982 0.09459012734964012 CGLGQENS(ph)DNEHLVENEVSLLLEESDLRR ddPTM_KYSE-520_SHP099_60min_R1 5 CGLGQENSDNEHLVENEVSLLLEESDLRR 29 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1 P46100-2 ATRX Transcriptional regulator ATRX 1 CGLGQENS(1)DNEHLVENEVSLLLEESDLRR;CGLGQENS(1)DNEHLVENEVSLLLEESDLRR;CGLGQENS(1)DNEHLVENEVSLLLEESDLRR;CGLGQENS(1)DNEHLVENEVSLLLEESDLRR;CGLGQENS(1)DNEHLVENEVSLLLEESDLRR 242.34 3.0463e-31 366680000.0 52978.0 55380.9 62430.9 50709.2 45628.7 55849.2 42552.8 45341.4 67161.9 51069.5 True False 50039.2047309753 52720.318435574365 66455.2957069719 55528.5871217231 49219.41909821043 55500.62442659113 46854.45229930712 45184.12126616229 54966.99197372101 50617.06396146979 0.988583707049181 1.0415522811774622 1.3129030114737261 1.0970329524444962 0.9723878717200337 1.0964805163104434 0.9256651538495634 0.8926657875801902 1.0859379756906176 1.0 15.627336206020688 -5.692111823372893 5.624508652277383 0.9917929754545257 1.1218443676317422 0.24637609294508223 0.0976808860281527 0.2857067616488401 16.440105981660537 0.03045480039939371 0.03917391673644889 2.0318337812627037e-06 5.692111823372893 0.1300513921772165 CGSGPVHISGQHLVAVEEDAES(ph)EDEEEEDVK ddPTM_KYSE-520_SHP099_60min_R1 11 CGSGPVHISGQHLVAVEEDAESEDEEEEDVK 31 0 P06748;P06748-3;P06748-2;E5RI98 P06748;E5RI98 NPM1 Nucleophosmin 1 CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHIS(0.001)GQHLVAVEEDAES(0.999)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK;CGS(0.008)GPVHIS(0.009)GQHLVAVEEDAES(0.983)EDEEEEDVK;CGSGPVHISGQHLVAVEEDAES(1)EDEEEEDVK 221.72 2.5169e-22 1158444000.0 230376.2 293395.0 317311.8 396004.0 269681.4 254065.2 255660.0 258390.5 342996.0 249556.0 True False 217596.7729424308 279299.86380512634 337766.22634483076 433640.10109705635 290903.7919027311 252479.48484609928 281504.60780115175 257494.20366429602 280716.5726255276 247345.12799163023 0.8797293672580199 1.129190884303884 1.365566522726335 1.7531782599402161 1.176104798444119 1.0207578653202452 1.1381045185198773 1.0410320419693457 1.1349185444033756 1.0 17.916165957149286 -5.99611386791942 24.99606161435972 1.0766909677885583 1.3004396794256023 0.18914377079873612 0.20808188171376046 205.09422882222128 1319170.567023031 0.07019850023115187 0.07924757061416998 1.008988304170304e-06 5.99611386791942 0.22374871163704402 CHTPPLYR ddPTM_KYSE-520_SHP099_60min_R1 1 CHTPPLYR 8 0 Q02543;M0R117 Q02543 RPL18A 60S ribosomal protein L18a 0 72.789 0.033417 330990000.0 169310.0 148730.0 121720.0 120120.0 190340.0 163300.0 114600.0 159520.0 133420.0 138860.0 False True 159918.03678888286 141584.78755171865 129566.26595888598 131536.16868460513 205318.67511354428 162280.78412694077 126184.88638821895 158966.662352248 109194.29124449812 137629.8084314453 1.161943321809821 1.028736355629263 0.9414113660081432 0.9557244188865127 1.4918183600888715 1.1791107317262186 0.9168427089039568 1.155030760879325 0.7933912899318524 1.0 17.070433443160276 -6.76004781227984 24.999945601145733 0.9792354162853375 1.1224511011516949 0.1781971694642276 0.16742874436242652 81.29586625989647 1460551.36472335 0.0707078544128433 0.0517544870526219 1.737609521584554e-07 6.76004781227984 0.14321568486635738 CIACQAAKLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 CIACQAAKLSPR 12 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 CIACQAAKLS(1)PR;CIACQAAKLS(1)PR;CIACQAAKLS(1)PR 134.02 3.0572e-05 2038260000.0 3784920.0 3565180.0 3686820.0 2592600.0 3334470.0 2993830.0 2404010.0 2564620.0 4384760.0 3063590.0 True False 3574962.9425490433 3393903.4013557183 3924478.316320572 2838999.92450639 3596873.8184609665 2975144.396465146 2647030.7916766335 2555723.9318068046 3588598.1148045682 3036448.976036957 1.177349914575193 1.1177212026744792 1.292456533039667 0.9349736968779008 1.1845658685019143 0.979810436448755 0.8717521066767354 0.8416818303143121 1.1818404139588912 1.0 21.53395369591808 -5.8316307872969615 1.1194744172012372 0.9620832156835333 1.1761826635294244 0.30406354337614505 0.12095751711836064 0.5764085628221828 1.538236006104188 0.05295821832795386 0.07324126962099455 1.4735647117847766e-06 5.8316307872969615 0.21409944784589108 CIAYS(ph)PPFGDYAQVSSLR ddPTM_KYSE-520_SHP099_60min_R1 2 CIAYSPPFGDYAQVSSLR 18 0 Q9HCJ3;Q9HCJ3-2 Q9HCJ3 RAVER2 Ribonucleoprotein PTB-binding 2 1 CIAYS(0.999)PPFGDYAQVSSLR;CIAYS(1)PPFGDYAQVSSLR 173.09 1.3288e-08 224725000.0 264990.0 244140.0 247250.0 177977.0 230610.0 229670.0 194888.0 215406.0 301620.0 235940.0 True False 250290.47645553164 232411.14793838887 263188.1306139872 194891.88056926383 248757.6950085869 228236.54433823918 214589.18096358786 214658.80686213827 246853.41122144758 233849.7551585423 1.0703046333567596 0.9938481559701522 1.1254582260971557 0.8334063913692519 1.0637500767958363 0.9759965076016541 0.9176369708751826 0.9179347086192448 1.0556068833772745 1.0 17.835222392688035 -5.2319683151883085 24.99898987181326 0.9653463234104787 1.0562681008617163 0.28131774735933546 0.07068049855354903 968.3676160584017 821422.2209719863 0.018400244647870684 0.0318640174602399 5.8618092894145045e-06 5.2319683151883085 0.09092177745123764 CIFMSETQSS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 9 CIFMSETQSSPTK 13 0 B4DGW0;A0A087WUY7;O75928-2;O75928 B4DGW0 PIAS2 E3 SUMO-protein ligase PIAS2 1 CIFMSETQS(0.07)S(0.93)PTK;CIFMS(0.002)ET(0.001)QS(0.076)S(0.921)PTK;CIFMSET(0.001)QS(0.11)S(0.888)PT(0.001)K;CIFMSETQS(0.002)S(0.978)PT(0.021)K;CIFMSETQS(0.009)S(0.991)PTK;CIFMSETQS(0.013)S(0.987)PTK;CIFMSETQS(0.113)S(0.885)PT(0.003)K;CIFMSETQS(0.001)S(0.954)PT(0.045)K;CIFMSETQSS(0.979)PT(0.021)K 387.84 2.5106999999999995e-78 6250480000.0 11648190.0 12954170.0 9517300.0 8769820.0 9082220.0 11905230.0 10083000.0 12270320.0 12998850.0 12715490.0 True False 11002041.680608904 12331832.2285944 10130800.386218399 9603301.05605748 9796939.043237023 11830925.043549145 11102288.04059695 12227757.12383421 10638586.514342265 12602840.651101522 0.8729810988800605 0.9784962430288734 0.80385054978323 0.7619949598599522 0.7773595901476977 0.9387506651141455 0.8809353659189987 0.9702381758485117 0.8441419525059554 1.0 23.58724561471139 -6.284168605525884 24.687697873460348 0.9220857580383817 0.8404660539204176 0.2854162781459292 0.06930078960934442 1077.6345485354134 1170484.865457063 0.026054788488135056 0.022994551708669056 5.197941584133154e-07 6.284168605525884 -0.08161970411796404 CIIPNHEK ddPTM_KYSE-520_SHP099_60min_R1 2 CIIPNHEK 8 0 P35579;P35579-2;P35749-4;P35749-3;P35749;P35749-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35580 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 0 ; 103.56 0.0035803000000000002 1195190000.0 2076120.0 1875720.0 1450730.0 1309320.0 2018570.0 1876280.0 1473080.0 1774690.0 1662450.0 1573110.0 False True 1960953.4849573849 1785607.5956868802 1544246.37705007 1433757.3791385875 2177419.9749077796 1864569.4405492735 1621993.3022753715 1768534.0146057613 1360590.9869540997 1559173.469261059 1.2576878221810315 1.145227026299476 0.9904262787269825 0.9195624524178762 1.3965219507869941 1.1958704257794683 1.0402904707223404 1.1342766212177307 0.8726360560758684 1.0 20.572350016487754 -7.750119941312235 24.594993416224504 0.9363180438974397 1.1309162918195295 0.2683814369714014 0.13106649163300546 222.78858692504804 484086.006842907 0.09475038792400764 0.035078157301527566 1.7777883613957046e-08 7.750119941312235 0.1945982479220898 CILDLAHQWGEFK ddPTM_KYSE-520_SHP099_60min_R1 1 CILDLAHQWGEFK 13 0 P54687-2;P54687-3;P54687-4;P54687;P54687-5 P54687-2 BCAT1 Branched-chain-amino-acid aminotransferase, cytosolic 0 63.708999999999996 0.036131 0.0 122330.0 122680.0 90808.0 72418.0 130870.0 113320.0 71541.0 69551.0 73692.0 85896.0 False True 115544.1110411909 116786.26865356589 96661.62897793709 79300.58494673441 141168.7244515578 112612.72784608036 78773.06245287572 69309.74381432545 60311.39042414603 85135.02826607684 1.3571865000158925 1.3717769410796201 1.1353919878411924 0.931468357523677 1.658174400440157 1.322754336724081 0.9252720537859253 0.8141154731012502 0.7084203958404968 1.0 16.377465221309805 -6.840115030943125 4.382347729865657 0.8311047913956454 1.2924313918780759 0.568486189292345 0.18596024221448976 0.1672917700906202 5.996371736827256 0.08455454694699412 0.056583716914300114 1.445056969929786e-07 6.840115030943125 0.46132660048243046 CIWS(ph)TPKR ddPTM_KYSE-520_SHP099_60min_R1 1 CIWSTPKR 8 1 G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58-7;Q9HB58;Q9HB58-6;Q9HB58-4 G5E9C0 SP110 Sp110 nuclear body protein 1 CIWS(0.978)T(0.022)PKR 60.019 0.036373 786910000.0 1973200.0 1813300.0 1651000.0 1690100.0 1731300.0 1776400.0 1542700.0 1631200.0 2336000.0 1698900.0 True False 1863742.6625233218 1726186.3461812085 1757426.1016933979 1850726.5958529084 1867543.460250493 1765312.8286778762 1698651.1713010927 1625541.7479249423 1911841.2857678581 1683849.0677241993 1.1068347503629035 1.025143155208222 1.0436957417262114 1.0991048018064065 1.109091958446469 1.0483794910809785 1.0087906356101732 0.9653725972731855 1.135399438354532 1.0 20.683331397155726 -6.519779345236071 12.111785151478022 1.0250772052646808 1.073853427505221 0.19074539887399378 0.047832091097229475 0.33995524212612444 1237.4789113157967 0.017679596038755126 0.014284915241693992 3.0214864763636654e-07 6.519779345236071 0.048776222240540124 CKDDEFTHLYTLIVRPDNTYEVK ddPTM_KYSE-520_SHP099_60min_R1 4 CKDDEFTHLYTLIVRPDNTYEVK 23 2 P27797;K7EJB9 P27797 CALR Calreticulin 0 ;;; 231.29 2.8048000000000003e-22 8626104000.0 3215210.0 2404990.0 1859160.0 2102750.0 3018900.0 2400570.0 1950050.0 1956190.0 2075890.0 1350050.0 False True 3036855.8919377704 2289450.6704364144 1979004.4283611744 2302594.727785158 3256470.25480865 2385587.1521837707 2147180.084653981 1949404.4334681798 1698960.7049283565 1338089.6073230067 2.2695459820611936 1.7109845692746308 1.478977504593573 1.7208075716182778 2.4336712855304 1.7828306408839063 1.6046609082852437 1.456856418882271 1.2696912789923773 1.0 20.35174330093273 -7.4956493122265275 1.1202150347018904 1.0389798384017765 1.8847624554707803 0.5754820959410039 0.26505359690165436 0.3926084362737862 0.8916872935364323 0.26000364199195775 0.0922757388360562 3.19411602580439e-08 7.4956493122265275 0.8457826170690037 CKHFELGGDK ddPTM_KYSE-520_SHP099_60min_R1 2 CKHFELGGDK 10 1 R4GN19;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881 R4GN19 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a 0 ; 132.32 0.00032231 1324510000.0 2752180.0 2968720.0 1968080.0 1302740.0 2167040.0 2360320.0 1512300.0 1807740.0 2219470.0 1748760.0 False True 2599511.0890651876 2826098.235060432 2094945.5858393377 1426552.0179169378 2337573.7192290397 2345588.3673637486 1665178.0426256824 1801469.3718696877 1816470.1962856129 1733267.3469146932 1.4997750310663 1.630503361233358 1.2086684662746636 0.8230421120297888 1.3486515645667956 1.3532755760610264 0.9607162135661221 1.039348820063101 1.0480034713161965 1.0 20.7250627687273 -4.861050028871405 4.803240297061775 1.0955286219938092 1.563046323976355 0.5912088715398423 0.15769913382524178 0.14178882338261875 5.398923896081427 0.043563360617002715 0.09661116179181599 1.3770508293764436e-05 4.861050028871405 0.46751770198254583 CKHFELGGDKK ddPTM_KYSE-520_SHP099_60min_R1 2 CKHFELGGDKK 11 2 R4GN19;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881 R4GN19 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a 0 ; 114.82 0.00038241 1587060000.0 4807500.0 4936800.0 4373700.0 2936400.0 4009200.0 3875900.0 2961700.0 3475400.0 4396300.0 2739500.0 False True 4540818.391486346 4699628.717712121 4655635.700167422 3215474.573139147 4324701.230772416 3851709.070407894 3261097.539406525 3463344.6485644537 3598042.7417042935 2715230.1612987495 1.672351190042166 1.73083990620677 1.714637590037869 1.1842364669377128 1.5927567734087869 1.4185571172962899 1.2010390816543803 1.2755252567273583 1.3251336085568808 1.0 21.37264306514033 -1.0000000000000002 0.12145521923158935 0.8620900727135943 3.771207333353923 0.6894253557057326 0.13491083936050627 52.64623104735977 0.4394986166543436 0.9084034025367721 25.95693756766139 0.09999999999999995 1.0000000000000002 2.909117260640329 CKPIDVFDFPDNS(ph)DVS(ph)SIGR ddPTM_KYSE-520_SHP099_60min_R1 2 CKPIDVFDFPDNSDVSSIGR 20 1 Q09GN1;Q71F23-3;Q71F23;D6R9S4 Q09GN1 MLF1IP;CENPU Centromere protein U 2 CKPIDVFDFPDNS(1)DVS(0.534)S(0.466)IGR;CKPIDVFDFPDNS(1)DVS(0.542)S(0.458)IGR 106.63 0.00022148 200042000.0 456520.0 451290.0 428990.0 408810.0 414010.0 451080.0 405820.0 426480.0 523510.0 418990.0 True False 431195.9255499423 429609.3509998997 456643.3818082687 447663.1794867921 446590.2316053296 448264.64240036946 446844.2460215264 425000.64042118005 428453.78061315534 415278.07456928777 1.0383305836629202 1.0345100724267127 1.0996086954070081 1.0779841433985964 1.0754004580389123 1.079432481152043 1.0760121311123347 1.0234121819746351 1.0317274300058652 1.0 18.663718178260265 -7.269264743503833 20.863939403784137 1.0206772789720329 1.06964506054949 0.575867699452056 0.019771233879921468 50.856788497613536 135586.29072832275 0.01123989451475603 0.005601318074937019 5.379417562383996e-08 7.269264743503833 0.04896778157745718 CKPIDVFDFPDNS(ph)DVSS(ph)IGR ddPTM_KYSE-520_SHP099_60min_R1 1 CKPIDVFDFPDNSDVSSIGR 20 1 Q09GN1;Q71F23-3;Q71F23;D6R9S4 Q09GN1 MLF1IP;CENPU Centromere protein U 2 CKPIDVFDFPDNS(1)DVS(0.249)S(0.751)IGR 120.15 4.041e-05 101380000.0 181510.0 189560.0 168720.0 175300.0 182790.0 177330.0 168970.0 164020.0 215110.0 180340.0 True False 171441.2784687856 180453.25306463902 179595.9611615448 191960.45929413332 197174.53306716785 176223.21769277655 186051.13658828373 163451.05290255597 176051.44648181656 178742.32790239694 0.9591532150258326 1.009572020138265 1.0047757756607825 1.0739507622332982 1.1031216577577299 0.9859064708444664 1.0408901952417102 0.9144507337501454 0.9849454717740403 1.0 17.447521793336474 -9.439899554587758 6.098115594092902 0.9999945769069425 1.0106754900341588 0.0008997515495986486 0.05166071370844513 35007991.3796945 4.924415388022663 0.05361119195278302 0.013402797988195653 3.6316203866615193e-10 9.439899554587758 0.010680913127216307 CLAFHDIS(ph)PQAPTHFLVIPK ddPTM_KYSE-520_SHP099_60min_R1 1 CLAFHDISPQAPTHFLVIPK 20 0 D6REP8;D6RE99;D6RD60;P49773 D6REP8 HINT1 Histidine triad nucleotide-binding protein 1 1 CLAFHDIS(1)PQAPTHFLVIPK 151.16 1.5757e-06 1226100000.0 610840.0 765370.0 699280.0 666900.0 765870.0 729790.0 660950.0 634230.0 912320.0 469870.0 True False 576955.4875206492 728600.4763562081 744356.7076875599 730281.975489203 826139.6117957871 725235.1099081446 727765.2762503772 632030.0041603952 746665.6857156389 465707.3173533285 1.238880013308697 1.5645029597063955 1.5983358645035466 1.5681135946918003 1.7739459549204408 1.557276604605966 1.5627095584118282 1.3571399473650079 1.603293866969991 1.0 18.82906402489315 -10.531084094678329 5.151896621619186 0.9979163733422731 1.542782928754591 0.5777033033383859 0.13737717609795067 0.003342481279840758 0.0003042259160828787 0.13522775237603618 0.032692238713475624 2.943851545462379e-11 10.531084094678329 0.544866555412318 CLAFHDISPQAPTHFLVIPK ddPTM_KYSE-520_SHP099_60min_R1 2 CLAFHDISPQAPTHFLVIPK 20 0 D6REP8;D6RE99;D6RD60;P49773 D6REP8 HINT1 Histidine triad nucleotide-binding protein 1 0 ; 174.02 4.2562e-09 620250000.0 1065130.0 1232430.0 940590.0 1017280.0 1360320.0 1116290.0 783240.0 682430.0 943690.0 640510.0 False True 1006045.1156159852 1173222.212884855 1001221.9363972113 1113961.9853436165 1467369.4448379546 1109322.82004325 862417.5428857632 680062.8096103597 772339.6844889857 634835.5797092399 1.5847333510777113 1.8480725567117722 1.5771358260288113 1.7547251933387549 2.3114165175020944 1.7474175290416605 1.358489615973884 1.0712424308697919 1.2165979809177108 1.0 19.276023461512903 -6.881699512154556 2.9410779762540935 1.1172928719449713 1.820136573770843 0.7274320090709114 0.19748738395572354 0.14753271863202339 2.5563202316089204 0.09928319172247321 0.06255984823400956 1.3131081227619535e-07 6.881699512154556 0.7028437018258717 CLDDHKYK ddPTM_KYSE-520_SHP099_60min_R1 1 CLDDHKYK 8 1 A0A087WW66;Q99460-2;Q99460;C9J9M4;H7BZR6 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 0 62.2 0.031954 713380000.0 317880.0 290390.0 244060.0 187840.0 303100.0 279850.0 198050.0 198970.0 271360.0 195750.0 False True 300246.56272193004 276439.22851572343 259792.49810980714 205692.25712384484 326952.24559690733 278103.35234491306 218070.82678173445 198279.8195099473 222087.86442892387 194015.80729119555 1.5475365997951613 1.4248283806113784 1.3390274830539364 1.060182981972826 1.6851835433501012 1.433405639611167 1.1239848434330666 1.0219776536679404 1.1446895360211313 1.0 17.56581467412539 -6.821483904326856 4.907976301426844 1.0664766721746357 1.4084241172409906 0.5449453388077662 0.1537755704757102 0.1736355164667153 8.348939224161125 0.06813595052185478 0.04604654269247039 1.5083985132529332e-07 6.821483904326856 0.3419474450663549 CLELFSELAEDKENYK ddPTM_KYSE-520_SHP099_60min_R1 2 CLELFSELAEDKENYK 16 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 224.86 3.4348000000000004e-18 2000450000.0 1237710.0 985940.0 628190.0 829450.0 962220.0 992050.0 873220.0 877530.0 728340.0 763060.0 False True 1169051.7589862847 938573.9624738896 668684.1325395382 908280.6786167641 1037941.2397171097 985858.2479677378 961493.5994059385 874486.053247041 596091.8159572611 756299.8820516974 1.5457516082309444 1.2410076806143582 0.8841521047517893 1.200953087752403 1.3723937611908297 1.3035282318083832 1.271312639633884 1.1562689271810107 0.7881685956900822 1.0 19.528598868359783 -7.617610728180757 5.0052696159681584 0.8993808975010864 1.2463577121959413 0.43662586600738273 0.1631435325439084 0.2122776328978724 8.634704834138494 0.12504858897703336 0.044279287496767586 2.4120664711662273e-08 7.617610728180757 0.34697681469485486 CLELFSELAEDKENYKK ddPTM_KYSE-520_SHP099_60min_R1 4 CLELFSELAEDKENYKK 17 2 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;;; 203.59 4.2227e-13 18448350000.0 14256220.0 10849260.0 7221470.0 7491240.0 11065090.0 9371860.0 8324960.0 8081800.0 7604180.0 7141840.0 False True 13465399.05753002 10328045.264528736 7686977.510960523 8203205.197276572 11935849.63125002 9313366.74542504 9166528.200579993 8053766.122106294 6223452.597778346 7078568.853867434 1.9022770471707835 1.45905838846025 1.085950800176321 1.15887905685832 1.6861953140045776 1.3157132377594385 1.2949691370977885 1.1377675753914653 0.8791964486406192 1.0 22.755026274811033 -1.0000000000000002 0.21816015664486438 1.0148619700633368 4.548149777451906 0.4806094827784012 0.21571846771947467 55.28878259189693 0.7030431843592138 0.3779901559181756 68.62076257941172 0.09999999999999995 1.0000000000000002 3.533287807388569 CLELFTELAEDKENYK ddPTM_KYSE-520_SHP099_60min_R1 2 CLELFTELAEDKENYK 16 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 185.61 5.1653e-12 1526840000.0 1181760.0 742350.0 483090.0 645340.0 887940.0 852560.0 739310.0 731250.0 556580.0 687050.0 False True 1116205.4170198448 706686.3917099332 514230.7543713289 706672.9195714531 957815.826312495 847238.8567989254 814046.669770279 728713.4644250325 455519.1022400142 680963.2715168118 1.6391565649841184 1.0377746073379617 0.755151967632418 1.0377548233950626 1.4065601866882012 1.2441770242787735 1.1954340326711461 1.0701215394508128 0.6689334378128324 1.0 19.377217461470764 -7.582256744279703 6.209505050981952 0.8379446032551013 1.168005381760788 0.2612423854011111 0.2334385988971987 0.3067284440612156 23.4060690827745 0.16916261752707767 0.062384224403158106 2.616635659858401e-08 7.582256744279703 0.3300607785056867 CLELFTELAEDKENYKK ddPTM_KYSE-520_SHP099_60min_R1 3 CLELFTELAEDKENYKK 17 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;; 276.67 2.8045999999999996e-30 9335340000.0 6635372.0 5493640.0 3738558.0 3693364.0 5707531.0 4380494.0 4041653.0 3881015.0 4090480.0 3219604.0 False True 6267294.687873849 5229717.28827824 3979551.430584292 4044380.2041096264 6156681.218290857 4353153.712084251 4450222.727972107 3867552.6648007147 3347751.9446094646 3191080.813374007 1.9640037512078192 1.6388545430627102 1.2470857566206905 1.267401372964104 1.9293404267569296 1.3641627920671668 1.394581644351018 1.2119883171217647 1.0490965727282242 1.0 21.60561371431796 -1.0000000051631213 0.10666145362809233 0.7313692747206627 3.850846688197608 0.5151615031793706 0.22190908270327545 107.90024871569024 0.8092663974195198 2.465734852481314 49.42808175468297 0.0999999988111474 1.0000000051631213 3.1194774134769454 CLIKS(ph)PDR ddPTM_KYSE-520_SHP099_60min_R1 4 CLIKSPDR 8 1 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 CLIKS(1)PDR;CLIKS(1)PDR;CLIKS(1)PDR;CLIKS(1)PDR 103.18 0.0014262 5594870000.0 6906200.0 6174190.0 6061030.0 5680270.0 6271890.0 6246560.0 5942670.0 5936870.0 7251910.0 5638960.0 True False 6523099.318831617 5877572.644751867 6451733.691790879 6220121.152964556 6765452.060827399 6207572.901996218 6543413.078470126 5916276.383645875 5935145.949774302 5589003.201444491 1.1671310757427562 1.0516316475239798 1.154362139231449 1.1129213794969648 1.2104935025048567 1.1106762115276398 1.170765670125035 1.0585566281509375 1.0619328234130103 1.0 22.414159570717217 -7.653081388491454 1.6408533590087717 1.0106285496834901 1.13743832138675 0.5277495806852224 0.04318789116012472 0.2876735780648207 1.434498209324474 0.03857799047062284 0.011944980220974294 2.222893272685733e-08 7.653081388491454 0.1268097717032599 CLIKS(ph)PDRLADINYEGR ddPTM_KYSE-520_SHP099_60min_R1 1 CLIKSPDRLADINYEGR 17 2 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 CLIKS(1)PDRLADINYEGR 168.75 1.8877e-08 90413000.0 95440.0 99225.0 125930.0 70006.0 88332.0 97651.0 64938.0 73319.0 138750.0 82590.0 True False 90145.75294507689 94458.08206023864 134047.64929512402 76659.34919192859 95283.22585966997 97041.52388720076 71502.56677380578 73064.67350178325 113556.49760286388 81858.31685404772 1.1012412227557227 1.1539216256871752 1.637556872005189 0.9364882169347701 1.164001771860991 1.18548154441319 0.8734917784993539 0.8925748330747697 1.3872322565016038 1.0 16.320841382376344 CLLADLPLPPELPGGDDLS(ph)KSPEEK ddPTM_KYSE-520_SHP099_60min_R1 3 CLLADLPLPPELPGGDDLSKSPEEK 25 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61;A0A2R8YCQ1;A0A2R8YD28;A0A2R8Y7Y0;Q9BVE2;A0A087X209 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 CLLADLPLPPELPGGDDLS(0.62)KS(0.38)PEEK;CLLADLPLPPELPGGDDLS(0.585)KS(0.415)PEEK;CLLADLPLPPELPGGDDLS(0.782)KS(0.218)PEEK 224.49 1.0339e-21 4076850000.0 1614160.0 1526390.0 1396770.0 1113474.0 1327400.0 1484490.0 1311860.0 1496160.0 1876970.0 1390600.0 True False 1524619.327051814 1453059.9332419 1486808.029111019 1219298.2341818344 1431858.8281271323 1475224.7472663946 1444475.6113197962 1490970.1701663684 1536159.5625632259 1378280.365870428 1.106175031441421 1.0542557009612818 1.0787413547548088 0.8846518200321374 1.0388734132644106 1.0703371997429152 1.0480274166914971 1.081761162014938 1.1145479545397805 1.0 20.394437956139075 -6.185105506562027 5.669235055492932 1.067050619442398 1.0276286592617354 0.05470993672300628 0.06110957766536202 0.6486136564522704 36.61903076027776 0.021234013298135714 0.021181006097776175 6.529719017957026e-07 6.185105506562027 -0.039421960180662685 CLLADLPLPPELPGGDDLS(ph)KSPEEKK ddPTM_KYSE-520_SHP099_60min_R1 1 CLLADLPLPPELPGGDDLSKSPEEKK 26 2 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61;A0A2R8YCQ1;A0A2R8YD28;A0A2R8Y7Y0;Q9BVE2;A0A087X209 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 CLLADLPLPPELPGGDDLS(0.5)KS(0.5)PEEKK 142.59 1.0486e-06 498790000.0 920200.0 993140.0 856390.0 752790.0 798890.0 818610.0 636160.0 723840.0 1164600.0 695910.0 True False 869154.6716267783 945428.0636664683 911594.2696724483 824334.9352654334 861758.0979376868 813500.7513420385 700469.2611232923 721329.1679855263 953137.9971769041 689744.7788097872 1.2601105486098467 1.3706925992218224 1.3216399713028362 1.1951303737128578 1.2493869100752355 1.1794228478913644 1.0155484791519713 1.0457914146595506 1.381870550468862 1.0 19.39570310522705 -5.850278187716836 1.130342344927868 1.1179110415008622 1.320918955892703 0.35973004990320334 0.10773280753224089 0.5402002198740354 1.4685266505228578 0.04774497094058361 0.06454217293903666 1.4116330321656692e-06 5.850278187716836 0.20300791439184085 CLLADLPLPPELPGGDDLSKS(ph)PEEK ddPTM_KYSE-520_SHP099_60min_R1 5 CLLADLPLPPELPGGDDLSKSPEEK 25 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61;A0A2R8YCQ1;A0A2R8YD28;A0A2R8Y7Y0;Q9BVE2;A0A087X209 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 CLLADLPLPPELPGGDDLS(0.04)KS(0.96)PEEK;CLLADLPLPPELPGGDDLS(0.072)KS(0.928)PEEK;CLLADLPLPPELPGGDDLS(0.281)KS(0.719)PEEK;CLLADLPLPPELPGGDDLS(0.35)KS(0.65)PEEK;CLLADLPLPPELPGGDDLS(0.156)KS(0.844)PEEK 215.47 2.2308999999999998e-21 2943220000.0 2055240.0 2156390.0 1790440.0 1496400.0 1732250.0 2062750.0 1647580.0 1921820.0 2535920.0 1987560.0 True False 1941231.7401806356 2052793.7875926194 1905854.6272052862 1638617.4060909338 1868568.2198457357 2049875.6121117373 1814133.4652312535 1915153.654976158 2075460.853340934 1969951.764698279 0.9854209503845175 1.0420528179313207 0.9674625853071026 0.8318058520290252 0.9485350115320862 1.0405714743100318 0.9209024798173722 0.9721830195519969 1.0535592244101544 1.0 20.909728874293876 -7.653363686331328 6.531968707977033 1.0259289495506383 0.9620341838101694 0.16148052236189336 0.05782854306456197 0.40269097176608315 21.24630888492882 0.04314148396404058 0.01580980883912412 2.2214488286702345e-08 7.653363686331328 -0.06389476574046893 CLRPHS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 CLRPHSSPR 9 1 Q96P50-4;Q96P50-1;Q96P50 Q96P50-4 ACAP3 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 1 CLRPHS(0.5)S(0.5)PR;CLRPHS(0.597)S(0.403)PR 59.542 0.025327000000000002 1050870000.0 436760.0 449530.0 406500.0 390520.0 425930.0 398210.0 345730.0 398450.0 440920.0 354966.0 True False 412532.05214052554 427933.90404171386 432703.64042299666 427634.90338588017 459448.26778980676 395724.62368150044 380679.7623996416 397067.8699489289 360860.042688683 351821.2773993689 1.1725614072858959 1.2163388957170602 1.2298961666602513 1.215489030529702 1.3059138184762642 1.1247887751606758 1.0820259798201861 1.1286067542134426 1.0256913548723599 1.0 18.424483210999657 -6.478058944794992 4.797878390534862 1.0729630088202342 1.226829519154206 0.7565687295785548 0.0451004275239273 0.10839086629116788 5.693166057656861 0.016492431639995354 0.013972461779338951 3.3261440600487415e-07 6.478058944794992 0.1538665103339718 CLRPHSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 CLRPHSSPR 9 1 Q96P50-4;Q96P50-1;Q96P50 Q96P50-4 ACAP3 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 1 CLRPHS(0.406)S(0.594)PR 58.676 0.027569 469870000.0 272930.0 252490.0 262640.0 251660.0 257980.0 233060.0 223330.0 245200.0 270750.0 200690.0 True False 257790.02882753385 240360.00140478328 279570.194638858 275577.6907356623 278281.55829458963 231605.38609078233 245906.37589075835 244349.4584301103 221588.62505207502 198912.04273445756 1.2960001078048196 1.2083732995777319 1.4054965742425007 1.3854248689384352 1.399018151284527 1.1643608044384197 1.236256852577986 1.2284296871673603 1.1140030638963883 1.0 17.601771098357755 -7.694201952083128 0.6561821347182544 1.0012861027992552 1.3295312702469193 0.6769054618566412 0.07125956932838029 0.4482202010398418 0.4391886716582202 0.07571291616026403 0.03402496760948646 2.0220786694659622e-08 7.694201952083128 0.3282451674476641 CLSSLKDER ddPTM_KYSE-520_SHP099_60min_R1 2 CLSSLKDER 9 1 P52209-2;P52209;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 77.192 0.015962 1659720000.0 5080500.0 5100700.0 3369900.0 2812500.0 4578800.0 4621500.0 3221400.0 4106600.0 4137100.0 3899000.0 False True 4798674.537274339 4855654.715693207 3587129.1460306454 3079799.154391039 4939125.510191745 4592655.504241622 3547050.549834281 4092355.1630876423 3385906.9278040235 3864457.8933761017 1.2417458462930953 1.256490521999495 0.9282360540605673 0.7969550294932669 1.278090134882226 1.1884346086714237 0.917864975554301 1.0589726362660514 0.8761660810453281 1.0 21.881834616231988 -4.74950964222785 24.94997519444645 1.0133741436249102 1.249118351689856 0.33773164535060596 0.13605929832177482 266.5199073754793 557391.9373010102 0.03661482347682621 0.09521382926035825 1.7802883823630683e-05 4.74950964222785 0.2357442080649459 CLVAGLLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 CLVAGLLSPR 10 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 CLVAGLLS(1)PR;CLVAGLLS(1)PR;CLVAGLLS(1)PR;CLVAGLLS(1)PR 129.34 0.00037363 2459295000.0 1163417.0 1113649.0 1145298.0 882719.0 869236.0 1020960.0 947869.0 1123794.0 1259563.0 1014945.0 True False 1098879.9397957085 1060147.6304187714 1219125.7416215912 966612.3483608541 937639.9279236989 1014587.8099341167 1043688.8488299703 1119895.8209094917 1030858.1101993242 1005953.3769152611 1.092376610102354 1.0538735241087376 1.2119107799608162 0.9608917973166454 0.9320908398348995 1.00858333320112 1.0375121479590081 1.1132681162059748 1.024757343486865 1.0 19.940132011195406 -5.279080431941769 24.991076331940818 1.0134485501629742 1.1128356422997274 0.41896789002341817 0.05828182500212791 905.4644405298535 1282717.5088880647 0.01788260853604257 0.026586335738201326 5.259198562822668e-06 5.279080431941769 0.09938709213675323 CMPTFQFFK ddPTM_KYSE-520_SHP099_60min_R1 3 CMPTFQFFK 9 0 P10599;P10599-2 P10599 TXN Thioredoxin 0 ;; 172.21 0.00054714 2186410000.0 1412370.0 1557150.0 1247710.0 1332520.0 1789400.0 1684690.0 1353210.0 1272090.0 1279330.0 1139840.0 False True 1334023.0206102063 1482342.1766701988 1328139.3830065853 1459162.300163254 1930215.5997067133 1674175.2248059756 1490005.672856909 1267677.4166980372 1047035.9212848427 1129741.9043821015 1.1808210489809474 1.3121069254140376 1.175613100527589 1.2915890740206941 1.7085456352638535 1.4819094682706713 1.318890329797804 1.1220947118814522 0.9267921436069119 1.0 20.107561788161245 -7.4078304272541375 2.6273690220840185 0.9688484875841613 1.3628722399619306 0.5417829903069752 0.1464376275102417 0.25138493440960413 3.263558648908759 0.1190488392315484 0.045417132170391485 3.909935316357167e-08 7.4078304272541375 0.3940237523777693 CNDSLRHS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 CNDSLRHSPK 10 1 A6NHR9;A0A2R8YCU7;J3KTK7 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 1 CNDS(0.103)LRHS(0.897)PK 56.568999999999996 0.053271000000000006 0.0 208140.0 262550.0 273290.0 653660.0 216660.0 179500.0 205110.0 177760.0 242780.0 195500.0 True False 196594.0592831968 249936.7039044154 290906.7106794607 715783.6498699541 233709.90937322972 178379.67391785598 225844.52048069407 177143.3920494958 198697.2719857535 193768.02209669855 1.0145846417583184 1.2898759103795066 1.5013143424371944 3.694023617130939 1.2061325023826608 0.9205836545559456 1.1655407225449614 0.9142034383831077 1.0254389234906627 1.0 17.563970974141704 -5.977864418182981 24.999487639838147 1.0157635868603232 1.886921163120286 0.2722490453563765 0.6763057678602143 338.11968163582924 381863.8204928116 0.22152966170764188 0.2511740645714592 1.0522903356706566e-06 5.977864418182981 0.8711575762599628 CNEIINWLDK ddPTM_KYSE-520_SHP099_60min_R1 3 CNEIINWLDK 10 0 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PS65;E9PM13 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ;; 124.42 0.0034155 5386360000.0 7454630.0 7914190.0 6158830.0 5440990.0 6877530.0 7794150.0 6425490.0 7199630.0 7873470.0 7313060.0 False True 7041106.813463517 7533980.432958616 6555838.0362764085 5958100.053706704 7418752.48320717 7745503.818756853 7075041.235939232 7174656.163936276 6443846.322026824 7248271.97787458 0.9714186822675203 1.0394174578376976 0.9044691005370891 0.8220028265900978 1.0235201584395541 1.068600052867784 0.9761004081436049 0.9898436738904091 0.889018284867997 1.0 22.789205660162118 -4.742411340881104 24.98185072170633 0.9607403615484902 1.0054180307345237 0.06604876087236689 0.06933239660709578 819.4221485100679 1075800.1062546915 0.019051388646993146 0.050222859791847416 1.8096252988042608e-05 4.742411340881104 0.04467766918603355 CNEIINWLDKNQTAEKEEFEHQQK ddPTM_KYSE-520_SHP099_60min_R1 1 CNEIINWLDKNQTAEKEEFEHQQK 24 2 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PS65;E9PM13 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 336.87 2.2288999999999996e-72 5480900000.0 3421600.0 2273900.0 2151000.0 1401200.0 2451500.0 1970200.0 1611000.0 1548200.0 1997000.0 1269600.0 False True 3231797.027209505 2164658.4308065167 2289656.901721687 1534369.626713859 2644419.1028730385 1957903.2509914183 1773855.601844856 1542829.6555525973 1634395.1402732919 1258352.3317338526 2.5682767422987896 1.7202323834246702 1.8195674168353353 1.2193481809658897 2.101493386378804 1.5559261119607668 1.4096652877820826 1.2260712811862242 1.2988374551833977 1.0 20.26310449478217 -1.0000000000000002 0.20434651300497464 1.0552030017337066 7.013967223504174 0.6378872270991883 0.2707683287785656 36.50644753946351 0.4466064836761199 0.4882684859508793 70.13798470948727 0.09999999999999995 1.0000000000000002 5.958764221770467 CNREPS(ph)KGR ddPTM_KYSE-520_SHP099_60min_R1 2 CNREPSKGR 9 2 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 CNREPS(1)KGR;CNREPS(1)KGR 52.071000000000005 0.051546 1056270000.0 349320.0 350540.0 202965.0 257950.0 379390.0 445160.0 312020.0 315320.0 429470.0 996130.0 True False 329942.52324784384 333699.53222873335 216048.44865548183 282465.4904445047 409245.83456618467 442381.5913162826 343562.02662174543 314226.2285162416 351489.07405767235 987305.0631774131 0.3341849804618647 0.3379902977047424 0.21882643644121488 0.28609747987663997 0.41450798727712546 0.4480698092366504 0.34797960573206266 0.3182666029332182 0.35600858049535977 1.0 19.913136400184207 -13.98124004682905 0.37751464105189164 9.999999999815461 0.32423826267319095 0.918806667145823 0.0589107593918008 164.05470175348657 1.260186531220263 1206.7995026809765 0.045840720992188305 1.0441429323981546e-14 13.98124004682905 -9.67576173714227 CNVRDS(ph)PTEENKGGLK ddPTM_KYSE-520_SHP099_60min_R1 1 CNVRDSPTEENKGGLK 16 2 E9PQ01 E9PQ01 PCF11 1 CNVRDS(0.901)PT(0.099)EENKGGLK 46.702 0.065243 1186200000.0 681740.0 623760.0 719790.0 522730.0 566090.0 514290.0 551430.0 602290.0 720650.0 543720.0 True False 643922.5231850024 593793.6333171522 766188.8151047203 572410.1020354946 610638.0623884961 511080.12534381135 607173.9258381807 600200.7965655428 589798.1261081365 538903.0638077596 1.1948763449871682 1.101856109559944 1.4217562796748904 1.0621763735967327 1.1331129908111384 0.948371162955805 1.1266848652669288 1.1137453781106164 1.0944419613070386 1.0 19.039666263294173 CNVWILDGDLYHK ddPTM_KYSE-520_SHP099_60min_R1 1 CNVWILDGDLYHK 13 0 O43237;B4E2E0;C9JLW1;Q9Y6G9;C9JGM7 O43237;Q9Y6G9 DYNC1LI2;DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 2;Cytoplasmic dynein 1 light intermediate chain 1 0 134.4 2.6385e-05 451190000.0 583220.0 433980.0 246660.0 219920.0 390050.0 309490.0 270960.0 240950.0 203240.0 267690.0 False True 550867.6239797536 413130.94938273996 262560.098269954 240821.13067864074 420744.71591908095 307558.35811051365 298351.28111476236 240114.20068815252 166336.7392634672 265318.47485966847 2.0762505297496414 1.5571133883580932 0.9896035261352477 0.9076681554347664 1.5858100953641472 1.1592044552238083 1.1245024730093354 0.9050036972176667 0.6269323662871407 1.0 18.017365612349526 -4.48848571217115 2.578436494001095 1.0557897979509971 2.0946282156889304 0.6675336316161326 0.23323775769673602 0.21354827315294603 2.4390345109434883 0.06642090553772727 0.38340161937200595 3.247239250655594e-05 4.48848571217115 1.0388384177379333 CPEALFQPSFLGMESCGIHETTFNSIMK ddPTM_KYSE-520_SHP099_60min_R1 5 CPEALFQPSFLGMESCGIHETTFNSIMK 28 0 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;;;; 252.43 2.8036999999999998e-31 679515000.0 649192.0 901061.0 844057.0 3387390.0 416292.0 530230.0 997797.0 747855.0 452236.0 479592.0 False True 613180.0256278318 857772.6770398647 898466.2647589508 3709326.527144059 449051.81202252617 526920.6378911682 1098664.058320294 745260.86555567 370121.34234182903 475343.18799693015 1.2899733100451876 1.80453343752431 1.8901422960220338 7.803470462625025 0.9446896965428402 1.1085057095518347 2.311307043128152 1.567837479056254 0.7786402575821058 1.0 18.85860996018901 CPFPAGAALACCS(ph)EDEEDDEEHEGGGSR ddPTM_KYSE-520_SHP099_60min_R1 1 CPFPAGAALACCSEDEEDDEEHEGGGSR 28 0 Q147X3 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 CPFPAGAALACCS(1)EDEEDDEEHEGGGSR 78.90899999999999 0.0092136 698500000.0 262840.0 277010.0 236000.0 238450.0 210460.0 271820.0 240050.0 238210.0 297260.0 240770.0 True False 248259.74124144984 263702.02379951335 251212.9376133508 261112.2163073934 227022.00464640366 270123.4705534904 264316.59666223335 237383.70510863222 243285.07731479168 238636.9651162254 1.0403239126031367 1.1050342668876982 1.052699180493686 1.0941817676076366 0.9513279073752685 1.1319431187952371 1.1076096133451119 0.994748257014655 1.0194777544053264 1.0 17.864458009755207 -7.278325180211613 24.83130398739542 1.005334746093931 1.0686363677314341 0.2768026461231985 0.047604051020599676 1086.3528092276683 1597520.6975261818 0.02586190236583215 0.012472788447820302 5.2683524312576814e-08 7.278325180211613 0.06330162163750308 CPLPCIPTLIGT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 4 CPLPCIPTLIGTPVK 15 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 CPLPCIPTLIGT(1)PVK;CPLPCIPT(0.017)LIGT(0.983)PVK;CPLPCIPTLIGT(1)PVK;CPLPCIPTLIGT(1)PVK 230.86 1.4998e-14 2090746000.0 857404.0 1063410.0 744428.0 755216.0 687071.0 896820.0 708640.0 985380.0 1018030.0 921092.0 True False 809842.0909274999 1012322.1873890471 792415.020006914 826991.5015760293 741139.5788007663 891222.613721513 780276.2468599246 981961.9467694212 833181.4144478824 912931.8414787318 0.8870783711692528 1.1088694044774763 0.8679892452030052 0.9058633558410016 0.8118235613299422 0.9762203192277147 0.8546927726784764 1.0756136462267294 0.9126436132387794 1.0 19.80014762858802 -7.254419026740265 24.99497046836371 0.9955964729197997 0.9195529632674341 0.15636555382709716 0.08489317799631865 1066.5272377582914 3797234.7441787403 0.04063597752107317 0.022813909227306264 5.566484104666154e-08 7.254419026740265 -0.07604350965236562 CPS(ph)DEDFR ddPTM_KYSE-520_SHP099_60min_R1 1 CPSDEDFR 8 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 CPS(1)DEDFR 71.61399999999999 0.026560000000000004 240290000.0 1198100.0 1084000.0 1044600.0 1006100.0 1028000.0 1120500.0 987340.0 1112100.0 1244500.0 1096200.0 True False 1131639.0046468638 1031923.0128828273 1111936.5874190934 1101719.441505005 1108897.751480106 1113506.543871628 1087149.962709807 1108242.3846660925 1018530.1712919953 1086488.520830694 1.0415563376423427 0.949778109108647 1.0234223059889695 1.0140184828300496 1.0206253726751562 1.0248672880779972 1.0006087886493338 1.0200221754931809 0.9374513874414984 1.0 20.05124150129563 -7.7413270060073 24.99993471386098 0.9687256623325592 1.0106005691351336 0.28930331848794977 0.026986138489213045 255.33761958516897 317390.02065473696 0.017306543759989447 0.006523912856016421 1.8141491681507335e-08 7.7413270060073 0.04187490680257444 CPS(ph)PINEHNGLIK ddPTM_KYSE-520_SHP099_60min_R1 6 CPSPINEHNGLIK 13 0 A0A087X1M6;G5E9X3;Q9Y2H6-2;Q9Y2H6 A0A087X1M6 FNDC3A Fibronectin type-III domain-containing protein 3A 1 CPS(1)PINEHNGLIK;CPS(1)PINEHNGLIK;CPS(1)PINEHNGLIK;CPS(1)PINEHNGLIK;CPS(1)PINEHNGLIK;CPS(1)PINEHNGLIK 223.29 1.0364e-11 5056740000.0 4956940.0 5267690.0 4302430.0 5308130.0 4918050.0 5308470.0 5048430.0 6460130.0 7333160.0 4473380.0 True False 4681968.656785098 5014622.265436114 4579771.521931392 5812613.079252528 5305072.555123288 5275337.869653031 5558774.5723287575 6437721.316835672 6001642.997920124 4433749.333436972 1.0559840678128074 1.1310116761943458 1.0329342453785555 1.3109927156722416 1.1965206321239816 1.1898141895098233 1.2537412817651743 1.451981344160756 1.3536270426158137 1.0 22.08009577759211 -5.293545698720139 0.9594058234091275 1.280166798230582 1.0531897509428692 0.2473569824146581 0.12138740767549058 0.8689919953300524 1.49354766511597 0.04959879123290933 0.14591960563693937 5.086912896898863e-06 5.293545698720139 -0.22697704728771284 CPS(ph)QSSSRPAAMISQPPTPPTGQPVR ddPTM_KYSE-520_SHP099_60min_R1 3 CPSQSSSRPAAMISQPPTPPTGQPVR 26 1 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 CPS(0.751)QS(0.104)S(0.104)S(0.042)RPAAMISQPPTPPTGQPVR;CPS(0.967)QS(0.013)S(0.016)S(0.005)RPAAMISQPPTPPTGQPVR;CPS(0.916)QS(0.025)S(0.025)S(0.034)RPAAMISQPPTPPTGQPVR 160.27 3.3057999999999996e-10 5142800000.0 647840.0 554200.0 468170.0 502960.0 557180.0 616770.0 432439.0 627550.0 542070.0 589660.0 True False 611903.0237629771 527575.4001288406 498348.98729848553 550761.167179562 601026.8960794611 612920.5096507844 476154.1543179316 625373.1755212714 443643.7524726807 584436.0711485388 1.046997360310872 0.9027084845944653 0.8527005978928127 0.9423805175084443 1.0283877497470644 1.048738330689048 0.8147241038394316 1.0700454786992915 0.7590971440226613 1.0 19.156685697857398 -6.748445769681844 24.998002836962893 0.9168037669438703 0.9632688972979013 0.07384721013867346 0.10029031679047376 838.3482229226223 1612873.6210994206 0.03783539329128707 0.02911643004795927 1.7846548243363556e-07 6.748445769681844 0.04646513035403099 CPS(ph)QSSSRPAAMISQPPTPPTGQPVREDAK ddPTM_KYSE-520_SHP099_60min_R1 4 CPSQSSSRPAAMISQPPTPPTGQPVREDAK 30 2 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 CPS(0.927)QS(0.045)S(0.012)S(0.016)RPAAMISQPPTPPTGQPVREDAK;CPS(0.33)QS(0.299)S(0.299)S(0.071)RPAAMIS(0.001)QPPTPPTGQPVREDAK;CPS(0.984)QS(0.005)S(0.005)S(0.005)RPAAMISQPPTPPTGQPVREDAK;CPS(0.977)QS(0.008)S(0.008)S(0.008)RPAAMISQPPTPPTGQPVREDAK 118.99 0.0001524 13466920000.0 795288.0 782330.0 687789.0 733042.0 703888.0 812100.0 619080.0 834173.0 1218900.0 979880.0 True False 751171.7892726776 744745.69249873 732124.9794413086 802710.091282887 759279.981025125 807031.3826668006 681662.6480385558 831279.4485604418 997578.4859685106 971199.0255351054 0.7734478407850559 0.766831177665561 0.7538361964870454 0.8265145147160899 0.7817964815263087 0.8309639542957196 0.7018774011464616 0.8559310982652897 1.027161745162245 1.0 19.889407448484715 -7.633563322931065 3.8119767462192478 1.0135810952272897 0.7792181932978044 0.8729861842041209 0.03566623217957784 0.07103140479477857 1.8693760531056955 0.02727181198374423 0.008992001857238018 2.325073450481365e-08 7.633563322931065 -0.23436290192948528 CPT(ph)PEIQKK ddPTM_KYSE-520_SHP099_60min_R1 6 CPTPEIQKK 9 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 CPT(1)PEIQKK;CPT(1)PEIQKK;CPT(1)PEIQKK;CPT(1)PEIQKK;CPT(1)PEIQKK;CPT(1)PEIQKK 94.12200000000001 0.0062035 14973480000.0 22373840.0 21494850.0 20810550.0 15885830.0 16795700.0 19470300.0 16737890.0 17595090.0 23839870.0 18564680.0 True False 21132718.494055744 20462205.141572364 22152031.351057287 17395614.50695105 18117426.03553932 19348778.63555892 18429919.267264444 17534056.7395149 19511150.56221685 18400211.3783025 1.1485041155002933 1.1120635910575116 1.2039009169850585 0.945402971156295 0.9846314079252025 1.0515519761025665 1.0016145406349504 0.9529269191000181 1.0603764359590113 1.0 24.133219004008886 -5.261343057069298 24.999999933801906 0.9991765654835453 1.1505469486965216 0.7589959674723747 0.04008642881561771 4.100380437029636 1064117.3301484121 0.01098574216912008 0.01757809906979366 5.47844042035164e-06 5.261343057069298 0.15137038321297636 CQEHS(ph)KESPAR ddPTM_KYSE-520_SHP099_60min_R1 1 CQEHSKESPAR 11 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 CQEHS(0.508)KES(0.492)PAR 100.54 0.0010133 1181400000.0 617460.0 544990.0 526690.0 495290.0 563290.0 568520.0 597460.0 579460.0 682510.0 590940.0 True False 583208.2629240067 518807.8623533326 560641.2801337958 542362.2126856315 607617.7183183159 564971.6557982141 657857.087447689 577449.9885069805 558583.3886769775 585704.7313443631 0.9957376673146787 0.8857839702993645 0.9572080437987255 0.9259993707763844 1.0374130270787743 0.9646014887082088 1.123188958944749 0.9859063067180018 0.9536945132658666 1.0 19.15981402307492 -5.7560064757453775 24.996104934136262 1.0134054838180686 0.9383699301711931 0.30714764936245187 0.05106482797636327 158.32433804380298 728426.2663793871 0.015082096013879486 0.0189099333699054 1.7538543500038973e-06 5.7560064757453775 -0.07503555364687553 CQEHSKES(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 7 CQEHSKESPAR 11 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 CQEHS(0.003)KES(0.997)PAR;CQEHS(0.178)KES(0.822)PAR;CQEHS(0.002)KES(0.998)PAR;CQEHS(0.145)KES(0.855)PAR;CQEHS(0.06)KES(0.94)PAR;CQEHS(0.032)KES(0.968)PAR;CQEHS(0.005)KES(0.995)PAR 196.37 3.4744e-07 3644902000.0 2633786.0 2437148.0 2021039.0 2177144.0 2285161.0 2280072.0 2299844.0 2186118.0 2711611.0 2584265.0 True False 2487684.6402577735 2320063.751846274 2151318.407716735 2384059.1111777895 2464990.169912482 2265841.224898234 2532334.6758344425 2178534.8669017763 2219250.7965506255 2561370.4226277447 0.9712318914441215 0.9057900143416543 0.8399091317333429 0.9307748266773342 0.9623716070647896 0.8846206721531814 0.9886639798223663 0.8505348729165022 0.8664310233870296 1.0 21.288484478348405 -4.25836462631409 23.208322419433504 0.910755107667945 0.9712319447809175 0.08959685770608017 0.053307982574345804 258.25685243678134 1949044.5328474601 0.012988288909370357 0.08797338910106738 5.5161411890957555e-05 4.25836462631409 0.06047683711297247 CQEVISWLDANTLAEKDEFEHK ddPTM_KYSE-520_SHP099_60min_R1 4 CQEVISWLDANTLAEKDEFEHK 22 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ;;; 273.6 2.5081e-36 4300698000.0 2267940.0 1868160.0 1282160.0 1590540.0 2100960.0 1656030.0 1754300.0 1789940.0 1600920.0 1275515.0 False True 2142132.847173696 1778410.7894346714 1364810.0851285325 1741704.4433867105 2266293.5991728054 1645694.1024968629 1931641.7643180827 1783731.1159151383 1310233.2839090233 1264214.9294356531 1.6944372331767559 1.4067313619121362 1.079571244849786 1.377696468245482 1.7926489763765734 1.3017518336312501 1.5279377891703665 1.4109397653699578 1.0364007364585646 1.0 20.26981032656647 -7.762431556273677 4.6829953635609884 1.00208962789387 1.4442512262415734 0.46014647218206706 0.18712253028481432 0.17476324848806932 9.458190730414845 0.16705094560728043 0.049510247991343286 1.728098303027745e-08 7.762431556273677 0.4421615983477034 CQHLQAEK ddPTM_KYSE-520_SHP099_60min_R1 2 CQHLQAEK 8 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 107.57 0.0024222 2707900000.0 5468900.0 5414000.0 4167500.0 3746200.0 5649300.0 5460700.0 4333400.0 5329700.0 4886300.0 4663900.0 False True 5165529.215018132 5153903.313420329 4436143.718235757 4102237.7216639025 6093867.769879923 5426617.745756184 4771462.361908441 5311212.514661331 3999071.0935990983 4622581.474459292 1.1174555264323056 1.114940502811405 0.9596680432235447 0.8874343793245407 1.318282393409351 1.1739366359985985 1.0322073041376871 1.1489710985099701 0.8651164107533384 1.0 22.140267317133745 -7.759255910814047 24.999867569977486 0.9325581907663221 1.091505233448998 0.23683665717602465 0.11592532451160284 85.1047898870292 974510.6608319582 0.09195158794185049 0.030905825136939038 1.740780804837817e-08 7.759255910814047 0.158947042682676 CQQEHWHAEHK ddPTM_KYSE-520_SHP099_60min_R1 1 CQQEHWHAEHK 11 0 A0A0A0MRY2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326-5;Q15326-2;Q15326 A0A0A0MRY2 ZMYND11 Zinc finger MYND domain-containing protein 11 0 68.676 0.014712000000000001 138770000.0 79539.0 74183.0 63497.0 57412.0 82511.0 77703.0 77096.0 73977.0 67622.0 40634.0 False True 75126.81311293448 70619.1373290469 67590.1182187921 62868.41921845282 89004.14627662941 77218.0267545356 84889.61606445137 73720.39105336159 55343.54941189811 40274.01437277363 1.8653917242409868 1.7534665572545318 1.67825629680673 1.5610169534267646 2.209964605286498 1.9173163628490228 2.107801205976605 1.8304703963953157 1.3741751418083594 1.0 15.297561661791999 -7.9333221044163755 2.791195135101051 1.0068143112676957 1.8692713647804065 0.714178121877016 0.1795495461988568 0.13653921167457628 2.2788565541084282 0.18600195477742357 0.05037981291611152 1.1659445469122496e-08 7.9333221044163755 0.8624570535127107 CQQEHWHAEHKR ddPTM_KYSE-520_SHP099_60min_R1 2 CQQEHWHAEHKR 12 1 A0A0A0MRY2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326-5;Q15326-2;Q15326 A0A0A0MRY2 ZMYND11 Zinc finger MYND domain-containing protein 11 0 ; 162.32 3.6232e-06 993220000.0 460080.0 527510.0 305370.0 291050.0 202537.0 339410.0 256930.0 335950.0 404290.0 161733.0 False True 434558.44525325764 502167.6277913471 325054.63880927494 318711.3044926264 218475.50962210752 337291.61629225337 282902.9917951575 334784.66786131915 330881.1273215268 160300.17144636984 2.7109044321804974 3.1326705596154194 2.0277872186682315 1.988215618342334 1.3629150090784579 2.104125112586657 1.764832746232001 2.0884860249405595 2.064134581616631 1.0 17.290416442940472 -4.857555348445358 4.672947371205326 1.823906148695156 2.9186715156157574 0.6235104506812292 0.3507256165563558 0.12321495416367907 4.5611070151926585 0.08810486744150729 0.19684891915507036 1.388176383202824e-05 4.857555348445358 1.0947653669206014 CQTAEADS(ph)ES(ph)DHEVPEPESEMK ddPTM_KYSE-520_SHP099_60min_R1 1 CQTAEADSESDHEVPEPESEMK 22 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 2 CQT(0.022)AEADS(0.978)ES(1)DHEVPEPESEMK 135.49 1.8058e-07 432190000.0 1493100.0 1403100.0 1393900.0 1349000.0 1452500.0 1437100.0 1338700.0 1387300.0 1714500.0 1368200.0 True False 1410274.7665789414 1335692.9699039639 1483753.0243188553 1477208.5544083614 1566803.4864055025 1428130.5258348226 1474028.8604529528 1382487.7800982543 1403190.019027823 1356078.8124434934 1.0399651949710749 0.9849670665506552 1.0941495514153106 1.0893235266662757 1.15539264534508 1.0531323937297572 1.0869787559005715 1.0194745079802368 1.0347407585400148 1.0 20.371009596631215 -9.501686958679375 6.849448818620515 1.0000001283449351 1.0634644603203385 0.14562679639786125 0.04493879646548725 0.0 0.0 0.046881015026499724 0.011370316281789831 3.1500180424700133e-10 9.501686958679375 0.06346433197540335 CQYVTEK ddPTM_KYSE-520_SHP099_60min_R1 3 CQYVTEK 7 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;P09972 P04075 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C 0 ;; 122.18 0.018353 5785000000.0 4404700.0 5028100.0 3180990.0 2798090.0 3852500.0 3695700.0 3376400.0 4125900.0 3669000.0 3508400.0 False True 4160362.510448239 4786542.528668026 3386041.705163958 3064019.6323235645 4155669.8322734493 3672633.7654496944 3717719.462488496 4111588.215892304 3002802.087963301 3477318.3054938964 1.1964284385111323 1.376503991914015 0.9737508642261111 0.8811444231270541 1.1950789278358007 1.0561684156573226 1.0691340670811713 1.1824020278489633 0.8635396084445603 1.0 21.729543703326453 -4.765132597254174 24.999994262139143 1.037413662363339 1.2864662380228957 0.46272662659232955 0.11115600169771743 76.12978530837744 515350.00705060293 0.02866239659158802 0.0636262082339845 1.7173839615107525e-05 4.765132597254174 0.24905257565955674 CRDDSFFGETSHNYHK ddPTM_KYSE-520_SHP099_60min_R1 4 CRDDSFFGETSHNYHK 16 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;H0Y8T4 D6REM6 MATR3 Matrin-3 0 ;;; 260.25 1.09e-28 6034860000.0 3472240.0 4955320.0 4124210.0 8389030.0 4370260.0 4053940.0 4974550.0 4174970.0 4213660.0 2806450.0 False True 3279627.9254611623 4717258.989113042 4390063.1755693145 9186320.888946157 4714174.598622033 4028637.856727307 5477426.060929435 4160488.0035153255 3448565.561724568 2781587.03638506 1.1790491839951032 1.6958876092705604 1.5782584251883143 3.3025466285191873 1.6947787493101625 1.448323494476344 1.969172989836722 1.4957245446909617 1.2397834461460213 1.0 21.40747681782297 -7.675836524715772 1.2306929582328208 0.9929490473479573 1.878208130988793 0.22592319462490185 0.5364726115125562 0.6890968523391123 2.025678629943047 0.5246682869864471 0.17215412819590858 2.1094220201884292e-08 7.675836524715772 0.8852590836408357 CRDDSFFGETSHNYHKFDSEYER ddPTM_KYSE-520_SHP099_60min_R1 2 CRDDSFFGETSHNYHKFDSEYER 23 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;H0Y8T4 D6REM6 MATR3 Matrin-3 0 ; 240.41 1.2999e-28 1782590000.0 450000.0 650420.0 664220.0 1195800.0 444290.0 311960.0 495170.0 414590.0 649420.0 221403.0 False True 425037.60294724006 619172.8468996763 707036.6839895768 1309448.4724696218 479253.0953356975 310012.9419243133 545226.6159934936 413151.884056033 531501.6985459599 219441.54166892724 1.9369058370383527 2.8215844738906637 3.22198193930066 5.9671858961198625 2.1839670451219737 1.4127358911469539 2.484609850290244 1.882742350941727 2.422065095349356 1.0 17.743477137309387 -5.972023229090079 24.99962332897665 1.920582408882923 3.5023560790213923 0.3631499495638596 1.0365569878738559 252.1650130980379 225329.77767254662 0.33210869777348384 0.3765692525447262 1.066539073775536e-06 5.972023229090079 1.5817736701384693 CRDPPSNPVAAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 CRDPPSNPVAASPR 14 1 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 CRDPPS(0.002)NPVAAS(0.998)PR;CRDPPSNPVAAS(1)PR 73.918 0.023267 0.0 942130.0 853820.0 883960.0 702870.0 850930.0 740610.0 848570.0 744280.0 943860.0 730910.0 True False 889868.1708104063 812801.2055900514 940941.4759860069 769670.5534744296 917893.3498705912 735987.5782746695 934351.7368451215 741698.266396258 772478.8167743359 724434.7060393757 1.2283621469151957 1.1219799366512855 1.2988630557615266 1.0624429600872756 1.2670477300692717 1.0159474306503833 1.289766667797299 1.0238303883192807 1.0663194492677286 1.0 19.466496138659046 -7.292885621284435 24.493977305188533 1.0338061183929683 1.177673502918208 0.37298559868017556 0.09090849496520459 575.0959958108176 447948.03871401935 0.0452312838273417 0.021732333845478978 5.0946502952652225e-08 7.292885621284435 0.14386738452523962 CRPDQLTGLSLLPLSEK ddPTM_KYSE-520_SHP099_60min_R1 2 CRPDQLTGLSLLPLSEK 17 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 165.66 4.0349000000000006e-08 1382220000.0 1417890.0 1336670.0 917950.0 910980.0 1413050.0 1485940.0 968570.0 1118600.0 1026220.0 1021460.0 False True 1339236.8152063591 1272454.366817426 977122.5257719298 997559.2653038757 1524248.9958452962 1476665.697278543 1066482.5079322604 1114719.8376832013 839884.3169009798 1012410.6590838546 1.3228197502565355 1.25685595602963 0.9651444470726359 0.9853306623683533 1.5055639548724344 1.458563957253077 1.0534090078598501 1.101055019207253 0.8295885759055556 1.0 19.949363171263585 -7.292053811614816 2.1511685266086236 0.9372056245421388 1.2319019737482768 0.32484007384609315 0.17643234340386552 0.4518425811026977 3.9300460932870167 0.13843849898715307 0.05591026258252255 5.104417493523362e-08 7.292053811614816 0.29469634920613796 CRS(ph)PGMLEPLGSSR ddPTM_KYSE-520_SHP099_60min_R1 6 CRSPGMLEPLGSSR 14 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR;CRS(1)PGMLEPLGSSR 203.23 1.5893999999999998e-11 19776070000.0 4089260.0 3859830.0 3728050.0 3392640.0 3543320.0 3783010.0 3453450.0 3815560.0 4918400.0 3801630.0 True False 3862420.5960622886 3674397.973077049 3968366.068090901 3715075.485565591 3822159.125267011 3759398.8313536886 3802558.428424032 3802324.712918402 4025342.542774245 3767950.515823389 1.025072006610006 0.9751715044150742 1.0531895393598916 0.9859671643680694 1.0143867625691938 0.9977304148677676 1.0091848108024 1.0091227835797365 1.068310883030429 1.0 21.845348587606882 -7.579443258665231 24.999985347231227 1.0356761062266353 1.0081019690739506 0.13871664157220065 0.025261214897096897 142.21346997591883 62851.4215812748 0.015483329722982674 0.005852148676957601 2.633642011140348e-08 7.579443258665231 -0.027574137152684752 CRSPGMLEPLGS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 2 CRSPGMLEPLGSSR 14 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 CRS(0.038)PGMLEPLGS(0.481)S(0.481)R;CRS(0.034)PGMLEPLGS(0.924)S(0.042)R 127.94 7.8541e-05 6140590000.0 3101400.0 3102200.0 3246800.0 2611260.0 3135000.0 2928800.0 2690660.0 2947400.0 3402700.0 2904900.0 True False 2929359.1595123746 2953165.655502868 3456093.9230636754 2859433.3652960523 3381706.664290018 2910520.2728168 2962658.1711110338 2937176.15732833 2784855.4550866 2879164.845978003 1.0174336365646064 1.0257021787509801 1.2003807034152987 0.9931468041124792 1.1745443019749395 1.0108904590449548 1.0289991471831372 1.0201486592305977 0.9672441850548618 1.0 21.457218961791554 -6.468423717375629 24.99702991659333 1.0078007718090116 1.081914400599275 0.2684388319947404 0.06333984744948541 439.78127931981373 201877.25375293283 0.021594355503988808 0.019044322950680093 3.4007623400813205e-07 6.468423717375629 0.07411362879026329 CRSPGMLEPLGSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 CRSPGMLEPLGSSR 14 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 CRS(0.043)PGMLEPLGS(0.107)S(0.85)R;CRS(0.001)PGMLEPLGS(0.112)S(0.887)R;CRS(0.062)PGMLEPLGS(0.13)S(0.808)R 111.64 0.00025468 6235910000.0 4998860.0 4313710.0 4777830.0 3892390.0 3957460.0 4270270.0 4096250.0 4219860.0 5388760.0 4123940.0 True False 4721563.270819645 4106472.8965892806 5085816.566598292 4262321.57531027 4268889.587132748 4243617.660953768 4510338.925547477 4205222.290582723 4410297.023584935 4087405.0999767655 1.1551493319921935 1.004665012678245 1.2442653571644275 1.0427940150425754 1.044400905395214 1.0382180276131403 1.1034724514027532 1.028824446739235 1.078996800099409 1.0 21.962753804306203 CS(ph)PPSFTYK ddPTM_KYSE-520_SHP099_60min_R1 1 CSPPSFTYK 9 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7 P28290-3 SSFA2 Sperm-specific antigen 2 1 CS(0.994)PPS(0.006)FTYK 90.964 0.0060861000000000005 0.0 1666200.0 1486600.0 1416100.0 1265800.0 1339700.0 1307600.0 1271700.0 1371000.0 1733100.0 1281700.0 True False 1573772.5645126482 1415181.504567907 1507384.071840112 1386101.2514233533 1445126.7681497089 1299438.7833704075 1400255.846595967 1366244.320993806 1418412.727895666 1270345.135147511 1.2388543246791774 1.1140134010932217 1.186594123230201 1.0911217849961703 1.1375859427224888 1.0229021605372766 1.1022641074886872 1.075490654620533 1.1165569801870903 1.0 20.27678907980193 -1.0000000000000002 0.22204666877350288 1.0378481655178824 1.9645775636050167 0.5961735604227332 0.042420873059745526 36.35495400827232 0.4668340773694835 0.06250681872213519 12.112841564317444 0.09999999999999995 1.0000000000000002 0.9267293980871343 CS(ph)YIS(ph)RDR ddPTM_KYSE-520_SHP099_60min_R1 1 CSYISRDR 8 1 Q13219 Q13219 PAPPA Pappalysin-1 2 CS(0.867)Y(0.136)IS(0.997)RDR 51.762 0.050347 9074200000.0 1845400.0 1688300.0 1661900.0 1702900.0 1455400.0 1715700.0 1446900.0 1549500.0 2254800.0 1374900.0 True False 1743031.9832863018 1607191.5338100342 1769028.733134018 1864743.1040044476 1569931.6999067564 1704991.679893399 1593166.7723831905 1544125.146156017 1845385.1588824335 1362719.4556560155 1.2790835091197867 1.1794001524960465 1.2981606197751132 1.3683983862303903 1.1520578893848614 1.2511685166134308 1.1691084072885987 1.1331203497147344 1.3541930081229097 1.0 20.37805715304246 -5.789114478436204 24.999089683975924 1.1866170828694074 1.2751921691260915 0.22132705406896347 0.09478583436548103 383.18666472694065 346132.7454840228 0.028442458300257403 0.03225763680094086 1.6251203235159484e-06 5.789114478436204 0.08857508625668409 CSAS(ph)PPLRR ddPTM_KYSE-520_SHP099_60min_R1 3 CSASPPLRR 9 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 CS(0.002)AS(0.998)PPLRR;CS(0.231)AS(0.769)PPLRR;CS(0.001)AS(0.999)PPLRR 140.48 0.00026989 2590930000.0 1959790.0 1954800.0 1849810.0 1714890.0 1675550.0 1658230.0 1679340.0 1967820.0 2340130.0 1604190.0 True False 1851076.5419554904 1860888.4737853785 1969051.7124006453 1877872.629999519 1807406.252424606 1647880.3714808119 1849104.075978982 1960994.0917126415 1915221.3818766854 1589978.124640934 1.1642151003640508 1.1703862115748445 1.2384143416094595 1.1810682177929968 1.136749131584923 1.0364170084748519 1.162974538656981 1.2333465859195354 1.2045583220267269 1.0 20.60057548597271 -11.371188753546383 2.080560565604359 1.534007596941606e-05 1.1689336657479479 0.4717257103082333 0.05389745471017524 1169263.6074923654 101163.2586171672 5542077.004442277 0.015948489656371724 4.254134792733436e-12 11.371188753546383 1.1689183256719784 CSATPSAQVKPIVSAS(ph)PPSR ddPTM_KYSE-520_SHP099_60min_R1 1 CSATPSAQVKPIVSASPPSR 20 1 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 CSATPSAQVKPIVS(0.001)AS(0.998)PPSR 138.25 1.7087e-06 2373600000.0 1003300.0 1145900.0 824600.0 712310.0 752190.0 932490.0 760480.0 982360.0 1230400.0 976260.0 True False 947644.9489710361 1090849.2439690332 877755.0354066499 780007.7282361892 811383.0736243404 926669.9840203974 837356.7399695703 978952.4224445485 1006990.3758599202 967611.095918788 0.9793655250214001 1.12736330595013 0.90713618220054 0.8061169735714312 0.8385425477721475 0.9576884638145708 0.8653856322042942 1.0117209554268198 1.040697424933661 1.0 19.884067787714162 -9.413084761468387 9.942545572615991 0.9999984778441801 0.9445883851066152 0.02579483722307707 0.09307376523332964 0.0 0.0 0.09869654210937458 0.023937427529421924 3.8629157697863376e-10 9.413084761468387 -0.05541009273756481 CSDVSELS(ph)SSPPGPYHQEPYVCKPEER ddPTM_KYSE-520_SHP099_60min_R1 1 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CSDVS(0.001)ELS(0.368)S(0.306)S(0.088)PPGPY(0.235)HQEPY(0.001)VCKPEER 65.064 0.021004 561900000.0 217900.0 205740.0 225060.0 198350.0 221710.0 181700.0 216020.0 206110.0 303170.0 168550.0 True False 205812.65262711898 195855.94157796408 239567.72770873219 217201.1243638981 239157.31564266008 180565.9429018071 237857.40975203345 205395.0525164356 248121.97029376752 167056.77812991577 1.2319922300133417 1.1723914693581121 1.434049730819222 1.3001634940845463 1.4315930087953306 1.0808657087914482 1.42381178671516 1.229492480435036 1.4852553309798027 1.0 17.3499789939312 -10.592537635605078 6.376109769445378 0.9992250971175605 1.307094511734554 0.3534747502347936 0.12570463440542412 0.00130947236424171 8.368126030341249e-05 0.11510047671305089 0.027849315622739127 2.555420440820314e-11 10.592537635605078 0.3078694146169936 CSDVSELSS(ph)SPPGPYHQEPYVCKPEER ddPTM_KYSE-520_SHP099_60min_R1 7 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CSDVSELS(0.085)S(0.784)S(0.131)PPGPYHQEPYVCKPEER;CSDVSELS(0.09)S(0.892)S(0.018)PPGPYHQEPYVCKPEER;CS(0.002)DVS(0.011)ELS(0.01)S(0.501)S(0.47)PPGPY(0.006)HQEPYVCKPEER;CS(0.001)DVS(0.014)ELS(0.142)S(0.42)S(0.42)PPGPY(0.002)HQEPYVCKPEER;CSDVSELS(0.008)S(0.496)S(0.496)PPGPYHQEPYVCKPEER;CSDVSELS(0.429)S(0.496)S(0.075)PPGPYHQEPYVCKPEER;CSDVS(0.01)ELS(0.06)S(0.46)S(0.46)PPGPY(0.009)HQEPYVCKPEER 286.37 4.5681999999999995e-52 12969190000.0 1885946.0 2001425.0 1761760.0 2057880.0 1796127.0 1843250.0 1767898.0 1782941.0 2250700.0 1658236.0 True False 1781328.815839858 1905273.538799829 1875325.8685156675 2253460.2964758156 1937471.9763353225 1831745.5930311305 1946614.382861775 1776756.3938125558 1842029.6155298427 1643545.319128088 1.0838330985511644 1.1592461227723188 1.1410247388313823 1.371097146059405 1.1788369653008197 1.1145087219151852 1.18439957828146 1.0810510505150763 1.1207659406112707 1.0 20.648379807172226 -7.868668998000974 0.7642913806360918 1.00485286630382 1.185447782075212 0.3436017168942729 0.0744248326915587 0.7615646842305953 1.0160001051949759 0.0753887664369754 0.029389722779384588 1.353103451983691e-08 7.868668998000974 0.18059491577139197 CSDVSELSSS(ph)PPGPYHQEPYVCKPEER ddPTM_KYSE-520_SHP099_60min_R1 6 CSDVSELSSSPPGPYHQEPYVCKPEER 27 1 Q9Y478;F5H610;F5H2X8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 CSDVSELSS(0.219)S(0.78)PPGPYHQEPYVCKPEER;CSDVSELS(0.005)S(0.21)S(0.785)PPGPYHQEPYVCKPEER;CSDVSELS(0.004)S(0.187)S(0.809)PPGPYHQEPYVCKPEER;CSDVSELS(0.001)S(0.25)S(0.749)PPGPYHQEPYVCKPEER;CSDVSELS(0.042)S(0.244)S(0.713)PPGPYHQEPYVCKPEER;CSDVS(0.001)ELS(0.057)S(0.428)S(0.457)PPGPY(0.055)HQEPY(0.001)VCKPEER 166.28 2.6392e-10 23475510000.0 2477010.0 2607510.0 2109606.0 2503290.0 2162880.0 2244845.0 2229579.0 2341270.0 2745010.0 2165890.0 True False 2339605.317502984 2482241.3056476954 2245594.5782489413 2741201.928958419 2333086.350896199 2230834.0896720295 2454966.603914124 2333148.680826527 2246585.3800708996 2146701.8996369196 1.089860365753946 1.15630461130515 1.046067261890786 1.27693646212455 1.0868236299091192 1.0391913707484675 1.1435992134396222 1.086852665114398 1.0465288079592578 1.0 21.033690435521013 -7.887029611959724 0.6261934028497114 0.9976032839669161 1.12943096986332 0.27720187333784885 0.0637433161450309 1.0557969937427192 0.9859411224673353 0.06430630991807232 0.028310221985470077 1.2970908270538265e-08 7.887029611959724 0.13182768589640392 CSGEKEPVVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 CSGEKEPVVSPK 12 1 Q5THK1-3;Q5THK1-2;Q5THK1-4;Q5THK1 Q5THK1-3 PRR14L Protein PRR14L 1 CSGEKEPVVS(1)PK 82.007 0.0049243 277920000.0 450900.0 351140.0 377280.0 408240.0 429650.0 387900.0 381170.0 431770.0 495630.0 392220.0 True False 425887.67815313494 334270.7073281147 401600.0724693431 447039.00685816846 463461.01062590204 385478.9722158007 419702.3834607105 430272.29064587585 405636.0858155498 388745.23594254244 1.0955444305845647 0.859870877948253 1.033067508841962 1.1499536599446378 1.1921972741407505 0.9915979324638605 1.079633509702338 1.106823314767184 1.0434496639735127 1.0 18.568465469617845 -4.99703226283467 24.998058989355485 1.0863168996023633 0.9698980248856212 0.21183900784276444 0.07866279543361955 116.26464093102138 979286.7966719099 0.01999663037822767 0.04127974483847201 1.006856868768764e-05 4.99703226283467 -0.11641887471674217 CSGPGLS(ph)PGMVR ddPTM_KYSE-520_SHP099_60min_R1 7 CSGPGLSPGMVR 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR;CSGPGLS(1)PGMVR 267.08 1.094e-21 62275200000.0 17686970.0 17872300.0 14437300.0 12814670.0 13395900.0 17729720.0 14178680.0 17340920.0 19935970.0 16651270.0 True False 16705838.515999444 17013687.881130792 15367951.458496733 14032572.383928979 14450081.117755216 17619062.24097431 15611999.344981777 17280768.395921145 16316100.392906424 16503752.702292033 1.0122448401495585 1.0308981349901067 0.9311792133411233 0.8502655509361906 0.8755633569175085 1.067579147530936 0.9459666311416306 1.047081152247343 0.9886297187815019 1.0 23.97629077288922 -6.264084927442884 24.995884276275532 1.008801105533676 0.9395997895149919 0.25753435452762197 0.05926011214166612 383.6155678035605 3624493.9915757934 0.02253200273107347 0.02077229385338041 5.443961843085609e-07 6.264084927442884 -0.06920131601868418 CSHQPISLLGSFLTEES(ph)PDKEIDQNSQQEESR ddPTM_KYSE-520_SHP099_60min_R1 5 CSHQPISLLGSFLTEESPDKEIDQNSQQEESR 32 1 Q12774 Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 CSHQPISLLGSFLT(0.034)EES(0.491)PDKEIDQNS(0.237)QQEES(0.237)R;CSHQPISLLGS(0.001)FLT(0.09)EES(0.893)PDKEIDQNS(0.014)QQEES(0.003)R;CSHQPISLLGSFLTEES(1)PDKEIDQNSQQEESR;CSHQPISLLGSFLT(0.001)EES(0.978)PDKEIDQNS(0.008)QQEES(0.013)R;CSHQPISLLGSFLTEES(0.999)PDKEIDQNS(0.001)QQEESR 215.73 1.4891000000000002e-22 1058999000.0 345492.0 335513.0 299328.0 315548.0 284007.0 315029.0 238656.0 267321.0 391419.0 273763.0 True False 326326.87003877293 319394.4518647201 318623.1618217336 345537.5870470343 306356.7351212167 313062.7871569257 262781.6775381045 266393.72584419063 320347.1764700213 271337.6728043911 1.2026596479067757 1.1771106037862031 1.1742680569514239 1.2734596839272456 1.1290608191442366 1.153775603370102 0.968467352218891 0.9817793566624837 1.1806218176749876 1.0 18.0497298412415 -6.614709515852002 5.0372573989888245 1.0317859709528177 1.1895644076320384 0.578986644244253 0.06416269765185074 0.15448140393287316 6.555791127001556 0.02514457462920531 0.019272352823059218 2.428233711284027e-07 6.614709515852002 0.15777843667922076 CSHQPISLLGSFLTEES(ph)PDKEIDQNSQQEGSR ddPTM_KYSE-520_SHP099_60min_R1 1 CSHQPISLLGSFLTEESPDKEIDQNSQQEGSR 32 1 A0A2R8YFR7;A0A2R8YF49 A0A2R8YFR7 1 CSHQPISLLGSFLT(0.042)EES(0.941)PDKEIDQNS(0.013)QQEGS(0.004)R 72.657 0.011825 125760000.0 30266.0 33274.0 16937.0 26629.0 31944.0 26304.0 14907.0 22256.0 31521.0 32538.0 True False 28587.08464622481 31675.467094707754 18028.786120158155 29159.81215369923 34457.81106350244 26139.826979026628 16413.945038299982 22178.79913058945 25797.580979746857 32249.73863418093 0.8864284132810262 0.9821929862444059 0.559036658394799 0.904187549687403 1.0684679170385962 0.810543839611819 0.5089636608993516 0.6877202752608522 0.7999314745578886 1.0 14.976999847908628 -6.529549832825698 24.97990171042558 0.7140767122269225 0.876268488530803 0.10548734194487397 0.1678000428884918 314.6532545422023 1178205.2964694574 0.06449348614257303 0.050080558458088904 2.9542698833366875e-07 6.529549832825698 0.16219177630388049 CSHQPISLLGSFLTEES(ph)PDKEK ddPTM_KYSE-520_SHP099_60min_R1 1 CSHQPISLLGSFLTEESPDKEK 22 1 A0A5F9ZH52;A5YM69 A0A5F9ZH52 ARHGEF35 Rho guanine nucleotide exchange factor 35 1 CSHQPISLLGSFLTEES(1)PDKEK 263.1 3.780799999999999e-36 836920000.0 914390.0 863260.0 818620.0 838150.0 795370.0 739500.0 757990.0 869730.0 1112700.0 918570.0 True False 863666.963908726 821787.6938203234 871389.5550383104 917807.5240010148 857961.0939637477 734884.5061964032 834615.0264695117 866713.1096265079 910661.7288843738 910432.1844366457 0.948634042900343 0.9026347133464164 0.9571163782808337 1.008100921398042 0.9423668326209647 0.8071820381120782 0.9167239918983665 0.9519798667517557 1.000252126903741 1.0 19.796192033296624 -7.633258316556403 3.216233004149601 1.0013113702202519 0.9259254889083457 0.2688537745630073 0.048249644965205854 0.3794904277556421 7.354033163064476 0.04416499553995511 0.014005251558871376 2.3267069303786383e-08 7.633258316556403 -0.07538588131190616 CSKPICDLISDMGNLVHATNS(ph)EEDIKK ddPTM_KYSE-520_SHP099_60min_R1 2 CSKPICDLISDMGNLVHATNSEEDIKK 27 2 Q7Z3T8;D6RC80;Q7Z3T8-3 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 1 CSKPICDLISDMGNLVHAT(0.001)NS(0.999)EEDIKK;CSKPICDLISDMGNLVHAT(0.004)NS(0.996)EEDIKK 289.7 3.3781e-52 507050000.0 518630.0 578180.0 564880.0 816150.0 560150.0 473190.0 452970.0 464790.0 675630.0 371280.0 True False 489860.56003672734 550403.3649341264 601293.0686399569 893716.6506155545 604230.6181824732 470236.6456890812 498760.6281611828 463177.75197280117 552952.6232462914 367990.7480514693 1.3311762935089135 1.4956989213683813 1.6339896364890583 2.428638913743979 1.64197230876566 1.2778490985955746 1.3553618692919511 1.2586668399283194 1.5026264279039763 1.0 18.48930996922982 -6.2032775629673775 5.126583199991164 1.2994545396014558 1.7358053593330371 0.3481188792421228 0.2918886794115135 0.271771965343776 15.211991143960594 0.10473446149711295 0.1036311203125658 6.262135159596146e-07 6.2032775629673775 0.4363508197315813 CSS(ph)VTGVQR ddPTM_KYSE-520_SHP099_60min_R1 1 CSSVTGVQR 9 0 O60343-2;A0A3B3IRT3;O60343-3;O60343 O60343-2 TBC1D4 TBC1 domain family member 4 1 CS(0.004)S(0.94)VT(0.056)GVQR 101.39 0.0032086 0.0 389720.0 330140.0 379320.0 387100.0 348090.0 376300.0 389860.0 418750.0 482320.0 422660.0 True False 368101.45471244084 314279.5788497572 403771.5741334589 423889.8676141409 375482.7026388236 373951.3721186022 429270.85346693697 417297.45398698427 394742.8462977536 418915.56122450443 0.878700838031578 0.7502217820009056 0.9638495475155443 1.011874245910313 0.8963207323721155 0.8926652689280141 1.024719282836292 0.9961373904736545 0.9422969276765629 1.0 18.676299950630856 -4.777522562062367 24.996203132178362 0.964475284360422 0.8144613315507279 0.5790800838481276 0.05166036133849926 144.98437196644488 225332.67092325143 0.013741014651256598 0.028747957512910583 1.6690810944124434e-05 4.777522562062367 -0.1500139528096941 CSTGSPS(ph)KDVTK ddPTM_KYSE-520_SHP099_60min_R1 2 CSTGSPSKDVTK 12 1 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 CST(0.001)GS(0.046)PS(0.946)KDVT(0.007)K;CS(0.001)T(0.003)GS(0.426)PS(0.57)KDVTK 86.803 0.0050121 1638310000.0 1853390.0 1605390.0 1704870.0 1462450.0 1442950.0 1445060.0 1583780.0 1518810.0 1938240.0 1498980.0 True False 1750578.762058633 1528264.6546604813 1814768.6480884482 1601440.8082983764 1556501.9557375677 1436040.8445222094 1743883.9386032582 1513541.6026029189 1586304.4750542354 1485700.2033887927 1.1782853351340117 1.028649421447612 1.2214904756350373 1.0779030686309299 1.0476554773212527 0.9665751147147229 1.1737791612504085 1.0187395809400992 1.067715055457333 1.0 20.50271159588741 -1.0000000000195721 0.154394040888654 0.9999644314167503 1.5497831385949143 0.23578794873512343 0.07063863297171191 107.9904859143671 1.0875964521195918 0.23132613222875187 13.390130475204774 0.09999999999549335 1.0000000000195721 0.5498187071781641 CSTKPRPPPGPWDVPS(ph)PGLPVSAPILVR ddPTM_KYSE-520_SHP099_60min_R1 2 CSTKPRPPPGPWDVPSPGLPVSAPILVR 28 2 Q8N884-2;Q8N884 Q8N884-2 MB21D1 Cyclic GMP-AMP synthase 1 CSTKPRPPPGPWDVPS(1)PGLPVSAPILVR;CSTKPRPPPGPWDVPS(1)PGLPVSAPILVR 102.05 0.0013999000000000001 3894800000.0 2007130.0 2046360.0 2138660.0 1919870.0 1893160.0 1769920.0 1598280.0 1758680.0 2091550.0 1834870.0 True False 1895790.497785542 1948049.793951019 2276521.445576988 2102333.867570035 2042140.9213930713 1758873.2727615118 1759849.7401096185 1752579.5495589965 1711777.2436848301 1818614.4793072576 1.0424367117695457 1.0711724865915868 1.2517889148469528 1.1560085391879489 1.1229102949685954 0.9671501534682039 0.9676870827400299 0.9636894292332837 0.9412534999374229 1.0 20.79440831366623 -6.249263265262044 5.165659555335106 0.9649065128052596 1.135047371482316 0.693486362654611 0.05343885342808771 0.11031520194784514 9.488874246719599 0.019867402151160556 0.0189175987865203 5.632960874771556e-07 6.249263265262044 0.1701408586770563 CSVS(ph)AVNLPK ddPTM_KYSE-520_SHP099_60min_R1 1 CSVSAVNLPK 10 0 Q3KQU3-4;Q3KQU3;C9JIR3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 CS(0.002)VS(0.998)AVNLPK 142.97 9.7499e-05 0.0 280040.0 328200.0 309870.0 257010.0 270780.0 226890.0 264820.0 261370.0 330240.0 320520.0 True False 264505.62295410014 312432.77936175687 329844.7160095303 281436.15312712576 292088.84547255165 225473.89534942797 291590.58999413706 260463.36847421664 270276.7406729354 317680.44216078665 0.8326153827884271 0.9834813161196313 1.0382909119806216 0.8859095990073047 0.9194423285419554 0.7097506343664353 0.9178739113141727 0.8198911041001041 0.8507818071347969 1.0 18.277216748415892 -5.727465664522548 2.5284688919602463 0.8517607441870079 0.9526426458652376 0.12988238419396814 0.0866997266943232 0.44122723317591306 5.771984152176757 0.027332051304803998 0.035335627206207046 1.8729851560420997e-06 5.727465664522548 0.10088190167822975 CTGDFSPS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 2 CTGDFSPSPEK 11 0 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 CTGDFS(0.002)PS(0.998)PEK;CTGDFS(0.002)PS(0.998)PEK 169.79 1.3055e-05 479030000.0 1913000.0 1942630.0 1824280.0 1526150.0 1701980.0 1853970.0 1725650.0 1700800.0 2323940.0 1806720.0 True False 1806882.076529044 1849303.1388529222 1941876.0077512022 1671194.837146273 1835916.1430584756 1842398.6855347466 1900095.5427210305 1694900.3217697057 1901971.0777599968 1790713.866406891 1.009028918815821 1.0327183887639135 1.0844144584905804 0.9332562105522556 1.025242601567767 1.0288626899570295 1.0610827214587981 0.946494218627213 1.0621300886982832 1.0 20.77210340050932 CTHWAEGGK ddPTM_KYSE-520_SHP099_60min_R1 4 CTHWAEGGK 9 0 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586;A0A494C1T2 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 0 ;;; 111.65 0.0015577 2538270000.0 5122510.0 4611700.0 3347650.0 3057740.0 4752060.0 4787310.0 3739050.0 3985870.0 4005040.0 3754030.0 False True 4838354.158829475 4390147.009697172 3563444.87542938 3348346.6902569453 5126020.086477197 4757430.622527524 4117029.6636114256 3972043.9472790468 3277825.694842336 3720772.214791145 1.3003629030542687 1.1799021160836098 0.9577164818807388 0.8999063895785663 1.3776764044033079 1.278613779047092 1.1064987120805305 1.0675321460123315 0.8809530671649372 1.0 21.827170640881604 -7.48897822272801 2.7615470485889593 0.9430698565015883 1.1538239644097763 0.2666430515429472 0.14192257418806362 0.4299788576416635 6.283661304119636 0.11836284091609113 0.04218470405285327 3.24355881449979e-08 7.48897822272801 0.21075410790818805 CTKEEHLCTQR ddPTM_KYSE-520_SHP099_60min_R1 1 CTKEEHLCTQR 11 1 J3KN67;P06753-7;P06753-5;P06753-2;A0A087WWU8 J3KN67;P06753-5 TPM3 Tropomyosin alpha-3 chain 0 123.84 0.00019797 1260800000.0 2122100.0 2152900.0 1846100.0 1174900.0 2282800.0 1752600.0 1299600.0 1355600.0 2016100.0 1319000.0 False True 2004382.8826985275 2049471.4524312161 1965102.5598644358 1286562.1427534353 2462443.372644737 1741661.3733060407 1430976.2508737294 1350897.7399994172 1650027.0617451095 1307314.6861664727 1.5332061239028187 1.5676955779032973 1.5031595534406785 0.9841258240019536 1.8835888548498803 1.3322434083665289 1.0945920412398011 1.0333378445864063 1.2621498704214786 1.0 20.318175026085896 -6.621108130918464 4.439456321954385 1.1025878209356688 1.4820839018248388 0.4276401857262765 0.21527361194300335 0.2210517003169578 7.724300032647223 0.08437370618227565 0.06430683912084417 2.3927199412906615e-07 6.621108130918464 0.3794960808891701 CTLIS(ph)EDS(ph)PN ddPTM_KYSE-520_SHP099_60min_R1 2 CTLISEDSPN 10 0 A6NK58 A6NK58 LIPT2 Putative lipoyltransferase 2, mitochondrial 2 CT(0.483)LIS(0.517)EDS(1)PN;CT(0.383)LIS(0.619)EDS(0.999)PN 86.31299999999999 0.011470000000000001 2372410000.0 3822200.0 2527600.0 2571000.0 1807200.0 1835380.0 1671750.0 1666490.0 2759200.0 3512300.0 2412500.0 True False 3610174.9466331988 2406170.3019950525 2736730.7737454427 1978955.7446455078 1979813.9641163005 1661315.9881458248 1834955.0725750683 2749628.979202123 2874554.8578777625 2391127.1268965984 1.5098214168640967 1.006291248561919 1.1445358730455277 0.8276246471319822 0.8279835655103231 0.6947836313086445 0.7674017211107567 1.1499300678215372 1.2021756708555251 1.0 21.189259403877156 -3.2557639143593997 1.0815950157125802 0.9222206412009243 5.242014308891746 0.5066825951834275 0.16457846879050614 11.55323008131034 2.098202930294766 0.05579631850103761 95.06054777695722 0.0005549272934945891 3.2557639143593997 4.3197936676908215 CTLPEHES(ph)PSQDISDACEAESTER ddPTM_KYSE-520_SHP099_60min_R1 3 CTLPEHESPSQDISDACEAESTER 24 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2;Q32MZ4-3 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 CTLPEHES(0.994)PS(0.006)QDISDACEAESTER;CT(0.001)LPEHES(0.886)PS(0.113)QDISDACEAESTER;CTLPEHES(0.998)PS(0.002)QDISDACEAESTER 219.27 2.6931e-21 5695880000.0 1167607.0 1491961.0 1029215.0 899022.0 1244871.0 1387301.0 984271.0 1282184.0 1510341.0 1361160.0 True False 1102837.51214315 1420284.9540808836 1095559.845702224 984464.7805791793 1342835.2653529095 1378642.3398658237 1083770.7182392539 1277736.4029679946 1236101.1469982513 1349101.1813664553 0.8174609342689376 1.0527638502564567 0.8120664786554938 0.729719011573358 0.9953554884540244 1.021896918413078 0.8033279736228102 0.9471019821314085 0.9162405044714657 1.0 20.363567122489172 CTNINSDS(ph)PVGK ddPTM_KYSE-520_SHP099_60min_R1 1 CTNINSDSPVGK 12 0 A0A087WV86;Q6PGQ7;Q6PGQ7-2;H3BLY2 A0A087WV86 BORA Protein aurora borealis 1 CT(0.023)NINS(0.024)DS(0.953)PVGK 57.678999999999995 0.0494 789520000.0 400060.0 368880.0 343930.0 314850.0 328270.0 370720.0 290270.0 333260.0 385350.0 335060.0 True False 377867.8743001617 351158.45109983155 366100.27810745704 344773.2493368959 354102.981399197 368406.19896839844 319613.3243622016 332103.99884346913 315380.15388298087 332091.62907273514 1.137842213473561 1.0574143409767198 1.1024074263168895 1.0381871120918353 1.066280961034525 1.10935105469855 0.9624251151846995 1.0000372480654467 0.9496781197514192 1.0 18.341221832184214 -6.765469290811443 24.99987056669089 0.9780382079357428 1.0817608746904013 0.751910469042079 0.030129752102008307 51.40201941929647 318872.1114023637 0.01187466017309647 0.008338299637914364 1.716053048834052e-07 6.765469290811443 0.10372266675465847 CTS(ph)HSETPTVDDEEKVDER ddPTM_KYSE-520_SHP099_60min_R1 3 CTSHSETPTVDDEEKVDER 19 1 O95425-2;O95425-3;A0A6I8PIX7;O95425-4;O95425 O95425-2 SVIL Supervillin 1 CT(0.323)S(0.445)HS(0.068)ET(0.051)PT(0.113)VDDEEKVDER;CT(0.138)S(0.836)HS(0.019)ET(0.003)PT(0.003)VDDEEKVDER;CT(0.002)S(0.504)HS(0.116)ET(0.212)PT(0.166)VDDEEKVDER 145.55 1.1075999999999999e-05 404460000.0 411470.0 357650.0 365478.0 436350.0 410540.0 384520.0 424910.0 439010.0 603440.0 410410.0 True False 388644.9388548909 340467.9571564055 389037.29666547594 477820.5728065885 442847.16234692856 382120.0680495477 467864.0495219728 437487.17677570425 493870.5074844842 406774.08669414854 0.9554319008209368 0.8369951978096424 0.9563964603231749 1.1746583384645626 1.0886808595551052 0.939391373612405 1.1501815499711452 1.075504047790165 1.2141149685767054 1.0 18.633868250513704 -5.06701535406832 5.525457688597091 1.0902369422487277 0.8956675111447884 0.5100357295827964 0.0802031827298081 0.160846180181012 9.447003125220062 0.02159739640849601 0.03888466379704007 8.57007546008143e-06 5.06701535406832 -0.19456943110393932 CVPAPGAGASGGTS(ph)PSATQPNPAVFIFEHK ddPTM_KYSE-520_SHP099_60min_R1 7 CVPAPGAGASGGTSPSATQPNPAVFIFEHK 30 0 O60343-2;O60343-3;O60343 O60343-2 TBC1D4 TBC1 domain family member 4 1 CVPAPGAGAS(0.022)GGT(0.098)S(0.44)PS(0.44)ATQPNPAVFIFEHK;CVPAPGAGAS(0.032)GGT(0.119)S(0.444)PS(0.405)ATQPNPAVFIFEHK;CVPAPGAGAS(0.016)GGT(0.397)S(0.456)PS(0.104)AT(0.027)QPNPAVFIFEHK;CVPAPGAGAS(0.017)GGT(0.118)S(0.851)PS(0.014)ATQPNPAVFIFEHK;CVPAPGAGAS(0.001)GGT(0.029)S(0.881)PS(0.088)ATQPNPAVFIFEHK;CVPAPGAGASGGT(0.019)S(0.979)PS(0.001)ATQPNPAVFIFEHK;CVPAPGAGAS(0.065)GGT(0.297)S(0.611)PS(0.026)AT(0.001)QPNPAVFIFEHK 280.03 1.8445e-42 2824959000.0 1800495.0 2006152.0 1549486.0 1258885.0 1212773.0 1722797.0 1365022.0 1683706.0 1973284.0 1893163.0 True False 1700617.9531522 1909773.4466244564 1649368.3468252574 1378529.0519024234 1308211.3353655478 1712044.384883902 1503011.7450909202 1677865.6168659327 1614985.3680415864 1876391.0486785248 0.9063238467002305 1.0177907467472953 0.8790109865354818 0.7346704477583562 0.6971954680165813 0.9124134258099524 0.8010119991509433 0.894198263228549 0.8606869922871156 1.0 20.839529092911985 -4.9683789709381365 7.844176433209398 0.8315118299008379 0.9595241044185104 0.2224162511984159 0.08619530551361755 0.27824075445344065 56.577024999329865 0.022604403676226112 0.046895934416317474 1.0755262859900582e-05 4.9683789709381365 0.1280122745176725 CVWS(ph)PLASPSTSILK ddPTM_KYSE-520_SHP099_60min_R1 1 CVWSPLASPSTSILK 15 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 CVWS(1)PLASPSTSILK 211.7 4.6034e-14 346340000.0 344560.0 434050.0 353800.0 311280.0 363750.0 450870.0 385380.0 385850.0 456280.0 418520.0 True False 325446.56993666873 413197.5864776679 376606.5141000155 340863.95761025563 392375.0555456113 448055.95308826497 424337.9713463509 384511.57640806685 373431.05388277327 414812.2384036331 0.7845635683004919 0.9961075113594067 0.9078963425701979 0.8217307158584312 0.9459100268006333 1.0801415956592004 1.0229639631158827 0.9269533075683215 0.9002411677145506 1.0 18.662098933736857 -5.993881531287767 24.684641079916634 0.9870482785189488 0.8876586680445413 0.34763450925452366 0.0695821376252626 176.32052391274263 711346.9152841765 0.022476737722641353 0.02541478222200479 1.0141880025615929e-06 5.993881531287767 -0.09938961047440753 CVWSPLAS(ph)PSTSILK ddPTM_KYSE-520_SHP099_60min_R1 2 CVWSPLASPSTSILK 15 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 CVWSPLAS(0.994)PS(0.005)T(0.001)SILK;CVWSPLAS(0.952)PS(0.02)T(0.02)S(0.008)ILK 129.38 5.2885e-05 1209350000.0 840020.0 1070010.0 720690.0 691120.0 812300.0 999550.0 805580.0 937350.0 868480.0 1078140.0 True False 793422.4160616456 1018605.1134822471 767146.8305447705 756803.8370071944 876223.3886452238 993311.4376857536 887015.8881031529 934098.5516291347 710785.9245991734 1068588.5183802275 0.7424957337781617 0.9532248344070311 0.7179066753474161 0.7082275581197166 0.8199820357169925 0.9295546607513813 0.8300818068377681 0.8741424183043315 0.6651633555604609 1.0 20.027274990413805 -5.999049144094682 24.999080489352533 0.8528104276293322 0.7853065929026475 0.11588413837819755 0.10210325518604052 86.75620242776147 2280792.2141705765 0.03155516150380265 0.035500541548501824 1.0021918251778208e-06 5.999049144094682 -0.06750383472668475 CWMIDADSRPK ddPTM_KYSE-520_SHP099_60min_R1 1 CWMIDADSRPK 11 1 P00533;E9PFD7;Q504U8;A0A0A0MSE1;Q15303;Q15303-4;Q15303-3;Q15303-2 P00533 EGFR;ERBB4 Epidermal growth factor receptor;Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-4;ERBB4 intracellular domain 0 77.062 0.016044 531940000.0 258770.0 324670.0 155580.0 180530.0 238090.0 299400.0 177940.0 200200.0 208900.0 209070.0 False True 244415.51225479416 309072.36586039444 165608.93573680145 197687.5169216764 256826.32845320884 297531.33354320907 195927.91172704773 199505.55292703147 170969.02594045593 207217.8024539986 1.1795102030823499 1.491533846031434 0.7992022585683287 0.9540083650175865 1.2394028187333137 1.4358386683946216 0.9455167915437325 0.9627819162464132 0.8250691973167232 1.0 17.660788427310745 -6.95620256958978 24.99225509146518 0.9271846087438907 1.1734998715069704 0.2825493896160495 0.19483803711969272 194.00520470391385 110705.301625538 0.0869950431032945 0.058652005538257605 1.1061077376920365e-07 6.95620256958978 0.2463152627630797 CYEEKQS(ph)PLQK ddPTM_KYSE-520_SHP099_60min_R1 2 CYEEKQSPLQK 11 1 H3BPG2;H3BQF2;A0A0B4J287;H3BM91;Q9H0A8-2;Q9H0A8 H3BPG2 COMMD4 COMM domain-containing protein 4 1 CYEEKQS(1)PLQK;CYEEKQS(1)PLQK 143.25 8.3364e-05 274360000.0 856600.0 727060.0 655410.0 557960.0 538780.0 684960.0 626610.0 562950.0 772220.0 599540.0 True False 809082.6904102353 692130.9462606913 697658.7772930774 610988.3506432098 581178.9207611404 680684.9105669891 689953.8539242744 560997.2578435175 632004.3140820448 594228.5420350623 1.3615682068036636 1.16475547251625 1.1740580062071677 1.028204314371622 0.9780393899807795 1.145493463231905 1.1610917435257828 0.94407659369956 1.0635711167922215 1.0 19.180658376923343 -3.5125900100080725 0.780866309272891 1.0479942623995537 2.102258306257214 0.6578729275551762 0.06909005890704756 4.776638778472118 0.960399603205845 0.02681657343489251 5.756375268139906 0.00030719206262174695 3.5125900100080725 1.0542640438576605 CYEMASHLR ddPTM_KYSE-520_SHP099_60min_R1 14 CYEMASHLR 9 0 P07737;K7EJ44;CON__P02584 P07737 PFN1 Profilin-1 0 ;;;;;;;;;;;;; 248.81 1.9039e-13 34614640000.0 23437560.0 23836440.0 20088600.0 14383040.0 23069610.0 23442590.0 16848110.0 17654510.0 16680630.0 19101130.0 False True 22137431.825182464 22691301.643174108 21383543.298896458 15749999.79718133 24885057.058874507 23296276.100222796 18551281.38050798 17593270.625403605 13651848.076463152 18931908.848654285 1.16931853000951 1.1985744187008933 1.1294974780325144 0.8319287781855589 1.314450500359523 1.2305296991686465 0.9798949238986348 0.9292919570893755 0.7211025673955508 1.0 24.174316545282185 -7.0315580199404035 3.0361331051922016 0.8705684669984631 1.1400048790533792 0.4339991850850129 0.13518262797618827 0.258586755832787 4.783729037685796 0.0713814119276518 0.04027225802661696 9.29912274034569e-08 7.0315580199404035 0.2694364120549161 DADLS(ph)PVNASIIK ddPTM_KYSE-520_SHP099_60min_R1 2 DADLSPVNASIIK 13 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 DADLS(1)PVNASIIK;DADLS(1)PVNASIIK 281.14 5.4343e-24 1818620000.0 2871700.0 2958900.0 2311300.0 3107400.0 2716100.0 2805100.0 2540900.0 3068000.0 3335500.0 2869200.0 True False 2712401.0764079783 2816750.0026005553 2460290.096210757 3402726.361726121 2929841.6175049795 2787592.330400989 2797758.9687942867 3057357.8240765864 2729857.2811124506 2843781.1202038233 0.9538009297331475 0.9904946560720782 0.8651474892816011 1.1965500219237113 1.0302627008421055 0.9802415209090328 0.9838165634188337 1.0751030739867404 0.9599393081689749 1.0 21.439378997379773 -5.177051449123521 24.999948376673107 1.031162527152659 0.9418828713417511 0.2830824376356036 0.06968286880746237 122.37616296865752 36251.95194253792 0.018852396760940585 0.032653304195120976 6.651943486301866e-06 5.177051449123521 -0.08927965581090791 DAEDALHNLDRK ddPTM_KYSE-520_SHP099_60min_R1 6 DAEDALHNLDRK 12 1 O75494;O75494-2;O75494-4;Q5JRI1;O75494-3;O75494-6 O75494;O75494-3 SRSF10 Serine/arginine-rich splicing factor 10 0 ;;;;; 200.21 7.2889e-08 3350900000.0 4293830.0 4343060.0 2937300.0 2351190.0 4259360.0 3934480.0 2580620.0 2981650.0 3682950.0 3026960.0 False True 4055642.6903621014 4134412.8785340386 3126643.057846171 2574646.3906889516 4594547.399556723 3909923.4508987516 2841494.254024131 2971307.352072339 3014219.1196141858 3000143.489339248 1.35181623971436 1.3780717133114864 1.0421645061166003 0.8581744172696194 1.5314425512923142 1.3032454830218383 0.9471194508266478 0.9903884139644069 1.0046916523576137 1.0 21.516600072181216 -6.7654668546503 24.983972660511707 0.9847488734736352 1.23657264064022 0.34227547474913245 0.17542932752737322 137.18397423892034 850991.406230402 0.07742223319593758 0.054363346959215644 1.7160626750062844e-07 6.7654668546503 0.25182376716658483 DAEDAMDAMDGAVLDGR ddPTM_KYSE-520_SHP099_60min_R1 2 DAEDAMDAMDGAVLDGR 17 0 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 0 ; 163.27 3.1575e-07 503960000.0 284733.0 234001.0 874790.0 259146.0 299720.0 241417.0 257894.0 229249.0 499790.0 278329.0 False True 268938.2928888364 222759.2407173384 931180.363113488 283775.15792491427 323306.2588264759 239910.22695391063 283964.4423228912 228453.7887261189 409040.73468061496 275863.22159668565 0.974897238320614 0.8074988736375097 3.375514712413826 1.028680649353816 1.1719802913748043 0.8696709389722904 1.0293668024295375 0.8281415239184013 1.4827664677919117 1.0 18.073593602179365 -5.422769223985619 21.608718099395823 1.04677231268344 1.7237705337865425 0.17166812992913116 0.6645722198075643 24.015850764886984 5174.418455189083 0.18920082722389242 0.2806301778661199 3.777728790850648e-06 5.422769223985619 0.6769982211031025 DAEDDGEEEDD ddPTM_KYSE-520_SHP099_60min_R1 1 DAEDDGEEEDD 11 0 Q5TB19;Q9BTT0-3;Q9BTT0;H0YCE2;Q5TB25;Q9BTT0-2 Q5TB19 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E 0 186.76 0.0205 0.0 310860.0 318780.0 368200.0 186060.0 322240.0 311390.0 287460.0 246480.0 424950.0 370800.0 False True 293615.97611595324 303465.33030146465 391934.7611408297 203743.086459021 347598.454705204 309446.49950574397 316519.26213924447 245625.01840886462 347789.7921177449 367515.00047803484 0.7989224269323442 0.8257222967953434 1.0664456161817384 0.5543803278614693 0.9458075296330083 0.8419969228555028 0.8612417499354881 0.6683401169731161 0.94632815440286 1.0 18.48744361057252 -7.985568613375512 24.553062087763585 1.0000001329978012 0.8249635270877339 0.18258245769900883 0.13150969289673084 242.04796284586067 411810.6217520755 0.1204129081829992 0.031090479208021615 1.0337877618787507e-08 7.985568613375512 -0.1750366059100673 DAELQDQEFGKRDS(ph)LGTYSSR ddPTM_KYSE-520_SHP099_60min_R1 11 DAELQDQEFGKRDSLGTYSSR 21 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DAELQDQEFGKRDS(0.977)LGT(0.006)YS(0.008)S(0.008)R;DAELQDQEFGKRDS(0.48)LGT(0.018)Y(0.005)S(0.094)S(0.402)R;DAELQDQEFGKRDS(0.968)LGT(0.008)Y(0.003)S(0.011)S(0.011)R;DAELQDQEFGKRDS(0.995)LGT(0.004)YSSR;DAELQDQEFGKRDS(0.982)LGT(0.018)YSSR;DAELQDQEFGKRDS(0.907)LGT(0.092)YS(0.001)SR;DAELQDQEFGKRDS(0.547)LGT(0.151)YS(0.151)S(0.151)R;DAELQDQEFGKRDS(1)LGTYSSR;DAELQDQEFGKRDS(0.997)LGT(0.003)YSSR;DAELQDQEFGKRDS(0.999)LGT(0.001)YSSR;DAELQDQEFGKRDS(0.893)LGT(0.107)YS(0.001)SR 236.26 1.6594000000000002e-26 42533700000.0 11692460.0 12602470.0 12432260.0 9427700.0 10868740.0 9961140.0 7917060.0 8666120.0 15032040.0 9322500.0 True False 11043855.935458845 11997028.424506878 13233663.371919317 10323705.77345864 11724048.003328692 9898968.83036272 8717393.687859619 8636059.252407607 12302600.462891197 9239909.90279524 1.1952341583025476 1.2983923599598692 1.4322286159863846 1.1172950691148549 1.2688487362611571 1.0713274192606685 0.9434500746833526 0.9346475607727562 1.3314632493515373 1.0 23.139447353495353 -6.293079276517141 4.296178842666307 1.0420109421452486 1.2671039479289494 0.39376493727221085 0.12763262221966734 0.22010586838262 9.608571862520638 0.045864050416488056 0.041595170264987616 5.092379058132887e-07 6.293079276517141 0.22509300578370084 DAFDRNPELQNLLLDDFFK ddPTM_KYSE-520_SHP099_60min_R1 2 DAFDRNPELQNLLLDDFFK 19 1 P52209-2;P52209 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 266.62 3.5458e-35 705370000.0 785320.0 623190.0 405820.0 400410.0 720100.0 658330.0 558670.0 437360.0 482520.0 449160.0 False True 741756.734103393 593251.0169727388 431979.8065349576 438464.8460123435 776767.7731914634 654221.1182748856 615145.8156937722 435842.90024059115 394906.53133934346 445180.7918411917 1.6661921351898716 1.332606949457891 0.9703469117532293 0.9849141159009305 1.744836676306012 1.4695627714959103 1.3817887630542958 0.9790244957290708 0.8870700141982261 1.0 18.764031820680742 -7.285369932369139 6.443047206689157 0.9463054443447425 1.3522970029449566 0.3865810230168264 0.23573231904290487 0.2218164719519663 36.139995400451994 0.13912976369075297 0.06852363414538666 5.183583128202672e-08 7.285369932369139 0.4059915586002141 DAGDKDKEQELSEEDKQLQDELEMLVER ddPTM_KYSE-520_SHP099_60min_R1 9 DAGDKDKEQELSEEDKQLQDELEMLVER 28 3 Q13200;C9JPC0 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 ;;;;;;;; 286.34 2.7654e-52 4981594000.0 2027659.0 1708424.0 1261073.0 1139629.0 1576885.0 1677805.0 1294705.0 1382622.0 1671881.0 1311186.0 False True 1915180.7132319957 1626348.7466432967 1342363.7833681423 1247938.9975180475 1700976.8782516618 1667333.1966448342 1425586.4165031316 1377826.0069883994 1368309.5550902614 1299569.9121272706 1.473703488638814 1.2514515236668726 1.0329292567037216 0.9602707679460597 1.3088767771387742 1.282988457247037 1.096967853133491 1.0602169180210022 1.052894147764987 1.0 20.309602816959806 -4.4095018309242855 3.04511622233912 1.1111236230656316 1.4824193079039147 0.5297864956524185 0.10852360282596554 0.25593267851717133 3.905444600602684 0.030428246921955237 0.18707435010718682 3.8949166565826225e-05 4.4095018309242855 0.3712956848382831 DAGKGT(ph)PLTNTEDVLK ddPTM_KYSE-520_SHP099_60min_R1 2 DAGKGTPLTNTEDVLK 16 1 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 DAGKGT(0.994)PLT(0.005)NT(0.001)EDVLK;DAGKGT(0.996)PLT(0.004)NTEDVLK 92.805 0.0049421000000000005 585620000.0 484900.0 476500.0 420360.0 355080.0 339620.0 450550.0 396010.0 417420.0 511310.0 472200.0 True False 458001.6303758149 453608.2247589187 447457.0781997802 388826.69644130504 366346.1618265312 447737.9503269631 436042.5554851534 415972.06744656037 418468.9930761831 468016.67536604125 0.97860109368455 0.9692138093245213 0.956070802070928 0.8307966722279696 0.7827630533463528 0.9566709348054363 0.931681665282801 0.8887975350904406 0.8941326561684872 1.0 18.836200408175632 -2.8493259021498334 12.100570699316526 0.9133938650959822 0.9368241292165651 0.0 0.0661512053192519 0.0 0.0 0.016055227424752225 0.0 0.001414731742160188 2.8493259021498334 0.02343026412058291 DAGLHCLELGHTGEAGPHAMVR ddPTM_KYSE-520_SHP099_60min_R1 1 DAGLHCLELGHTGEAGPHAMVR 22 0 H0YGH1;O15067 H0YGH1 PFAS Phosphoribosylformylglycinamidine synthase 0 157.85 2.7512e-08 333040000.0 86635.0 79475.0 62801.0 56364.0 77766.0 62258.0 65314.0 57625.0 68683.0 47415.0 False True 81829.18384740922 75656.90170559299 66849.25294515274 61720.81761354551 83885.74177198627 61869.4247285675 71916.57652321224 57425.11232477613 56211.898557531575 46994.93998831182 1.7412339257750107 1.609894633856533 1.4224776744428 1.3133502804535166 1.784995188691583 1.3165124744058645 1.5303046783568341 1.2219424546357207 1.1961266164296012 1.0 15.520217807685281 -7.569593195696362 0.7201613804108195 0.993085149950972 1.5614624444436267 0.6134864336883142 0.1486995266766432 0.4460382276492202 0.48713971868938216 0.14241675683743316 0.0618930309806232 2.694057149841421e-08 7.569593195696362 0.5683772944926547 DAHDVS(ph)PTSTDTEAQLTVER ddPTM_KYSE-520_SHP099_60min_R1 2 DAHDVSPTSTDTEAQLTVER 20 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 DAHDVS(0.998)PT(0.002)STDTEAQLTVER;DAHDVS(0.996)PT(0.004)STDTEAQLTVER 235.99 7.2713e-23 0.0 377850.0 335600.0 318400.0 300810.0 294830.0 291200.0 299450.0 338810.0 409630.0 310420.0 True False 356889.9072746994 319477.27225413 338924.5734580123 329398.89195817604 318031.44364677067 289382.5127848444 329721.32835036766 337634.7471888485 335251.51793197234 307669.92030310567 1.1599765973973144 1.0383766860907044 1.1015850139789929 1.0706242964332158 1.0336774012014474 0.9405616008862837 1.0716722909588878 1.097392773580929 1.0896467149004825 1.0 18.231023878294188 -1.114416638169312 1.0890164497624968 1.0476741350888354 148.64153667185033 0.3161092301846875 0.04770419757799266 2961.1066577858305 3.3474747417598114 0.016484636393613816 1092019.2980301946 0.0768392932787672 1.114416638169312 147.5938625367615 DAHQGRPTWALRPEDGEDKEMK ddPTM_KYSE-520_SHP099_60min_R1 2 DAHQGRPTWALRPEDGEDKEMK 22 3 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 0 ; 188.23 1.2934e-13 3843400000.0 2208400.0 2688600.0 1795210.0 2469700.0 2146000.0 2378200.0 1848630.0 2036070.0 2320800.0 1696860.0 False True 2085895.6496637461 2559435.620329127 1910932.1090375583 2704419.5454576164 2314877.9909302588 2363356.771651501 2035507.5612901663 2029007.348392308 1899401.2226070403 1681827.1405371039 1.2402556715772823 1.5218184786289943 1.1362238502271333 1.6080246776098168 1.3764066087023576 1.4052316761262074 1.2102953461912334 1.2064303753264023 1.1293676840061295 1.0 20.681598001251736 -7.451115507118222 0.9682078325823691 1.0203829703495784 1.3881508492126895 0.49434226076188026 0.12810592460151604 0.435569628389071 0.7500091651430838 0.11216139078298627 0.04261650333732527 3.5390320271105545e-08 7.451115507118222 0.36776787886311113 DAIHFYNK ddPTM_KYSE-520_SHP099_60min_R1 4 DAIHFYNK 8 0 P31948;P31948-2;P31948-3 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ;;; 127.56 0.0014312 3763030000.0 9638090.0 8517360.0 5626020.0 6315410.0 10014770.0 9345240.0 7497830.0 8663840.0 7290130.0 8234500.0 False True 9103445.93464391 8108173.240781994 5988682.251150267 6915624.667602746 10802875.422753341 9286912.890719239 8255783.828169099 8633787.161195457 5966426.161222108 8161548.736344058 1.115406674483913 0.9934601265903885 0.7337678723257713 0.8473422007280177 1.3236305720564083 1.1378861035729457 1.0115462266867812 1.0578613741223504 0.7310409278882467 1.0 22.960411513461406 -3.0732142235224353 2.551783553753102 0.9896090496820107 31.538463417887154 0.04985352229508111 0.17075853570274113 1881.2814361530743 58.4620570347793 0.047667240571750875 332498.1375104825 0.0008448619990652925 3.0732142235224353 30.548854368205145 DAKT(ph)PDKMK ddPTM_KYSE-520_SHP099_60min_R1 2 DAKTPDKMK 9 2 P46940;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 1 DAKT(1)PDKMK;DAKT(1)PDKMK 70.41199999999999 0.018040999999999998 2654600000.0 5703100.0 4841100.0 4761400.0 4196300.0 4809300.0 4559900.0 4171220.0 4447400.0 5956900.0 5028800.0 True False 5386737.674152005 4608526.289360757 5068327.462509367 4595115.090336405 5187764.54882615 4531439.972690974 4592887.624784174 4431973.007430965 4875277.121228828 4984248.744347203 1.0807521755934189 0.9246180368881941 1.0168688848560217 0.9219273206514569 1.0408317912924714 0.9091520518172828 0.9214804196907541 0.8891957915337609 0.978136800808354 1.0 22.24894463874574 -6.280082753996728 24.903636273141718 0.9315357119488893 0.98991160821532 0.20503822506519143 0.054507349509163826 1198.0490684699364 1600337.4065007158 0.01796717598935003 0.015871742120381043 5.247074687021556e-07 6.280082753996728 0.058375896266430694 DALGDSLQVPVS(ph)PSSTTSSR ddPTM_KYSE-520_SHP099_60min_R1 15 DALGDSLQVPVSPSSTTSSR 20 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 DALGDSLQVPVS(0.822)PS(0.134)S(0.023)T(0.008)T(0.003)S(0.005)S(0.005)R;DALGDSLQVPVS(0.906)PS(0.076)S(0.004)T(0.001)T(0.008)S(0.002)S(0.002)R;DALGDSLQVPVS(0.949)PS(0.04)S(0.008)T(0.002)TSSR;DALGDSLQVPVS(0.352)PS(0.138)S(0.345)T(0.092)T(0.024)S(0.024)S(0.024)R;DALGDSLQVPVS(0.949)PS(0.047)S(0.003)TTSSR;DALGDSLQVPVS(0.955)PS(0.033)S(0.006)T(0.001)T(0.001)S(0.001)S(0.001)R;DALGDSLQVPVS(0.929)PS(0.061)S(0.007)T(0.001)TSSR;DALGDSLQVPVS(0.877)PS(0.085)S(0.019)T(0.005)T(0.005)S(0.005)S(0.005)R;DALGDSLQVPVS(0.431)PS(0.173)S(0.249)T(0.1)T(0.029)S(0.012)S(0.005)R;DALGDSLQVPVS(0.975)PS(0.014)S(0.011)TTSSR;DALGDSLQVPVS(0.824)PS(0.082)S(0.082)T(0.008)T(0.002)S(0.001)S(0.001)R;DALGDSLQVPVS(0.999)PS(0.001)STTSSR;DALGDSLQVPVS(0.556)PS(0.401)S(0.036)T(0.004)T(0.002)SSR;DALGDSLQVPVS(1)PSSTTSSR;DALGDSLQVPVS(0.979)PS(0.016)S(0.003)T(0.001)TSSR 402.0 3.0213999999999997e-93 76471390000.0 10666560.0 14426990.0 9855300.0 8652390.0 9018590.0 14638780.0 10696080.0 14964150.0 15962340.0 15872670.0 True False 10074864.653539807 13733895.74504652 10490588.407037532 9474710.5441641 9728301.724242207 14547413.944040254 11777344.150081154 14912242.856308872 13063981.433845771 15732050.492550395 0.6404037832392263 0.8729882828401764 0.6668290577890749 0.6022552844367404 0.6183746822354056 0.9246991643542523 0.7486210494721006 0.9478893335214168 0.8304055113497102 1.0 23.907203385991163 -6.265237869351663 24.996477087786612 0.8782097267473011 0.6858125482450994 0.5491470292061427 0.09482332704024574 290.4977846837446 1911652.9794907342 0.03332560888480277 0.030515120390593974 5.429528669207111e-07 6.265237869351663 -0.19239717850220173 DALLSALSIQNYHLECNETK ddPTM_KYSE-520_SHP099_60min_R1 1 DALLSALSIQNYHLECNETK 20 0 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 214.55 1.6513e-18 416360000.0 356120.0 268710.0 189780.0 357290.0 200180.0 248250.0 244270.0 305030.0 273200.0 209220.0 False True 336365.31369238003 255800.76825806702 202013.5224587364 391246.73417684453 215933.02713160304 246700.57966633808 268963.1954454645 303971.9221245376 223593.76681154885 207366.473570697 1.6220814671746044 1.2335685892389805 0.9741860339340939 1.886740548941522 1.0413111792537932 1.1896840189175082 1.2970428189963286 1.4658682133633578 1.0782541794795941 1.0 17.661823136557487 -13.897944826934317 0.1242106432264952 1.0893243954531088e-08 1.4507152028003727 0.14869576593693756 0.2609497058479439 319.686883193702 2.6044107493437347 80.04340796271403 2.2677321423095047 1.2648970306413868e-14 13.897944826934317 1.4507151919071288 DALNIETAIK ddPTM_KYSE-520_SHP099_60min_R1 1 DALNIETAIK 10 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 138.71 0.0019384 312290000.0 288680.0 430710.0 324600.0 262270.0 428640.0 396830.0 356340.0 357670.0 424780.0 440730.0 False True 272666.34493068716 410018.0450911099 345524.235378363 287196.061945649 462371.52937201626 394353.23677338567 392362.3247432624 356429.3262508055 347650.6598323935 436825.47508275125 0.6241997330376253 0.9386312577430082 0.7909892052722146 0.6574617972801224 1.05848114578122 0.9027706928005521 0.8982130098271721 0.8159536166778834 0.7958571092185852 1.0 18.736697469210704 -5.749000692254249 24.999978694614207 0.9015382261833049 0.7688190717951052 0.33836189944252903 0.10745909812242482 326.5454470486351 656306.5905455278 0.032196096803118454 0.04126657257493613 1.7823759263843795e-06 5.749000692254249 -0.1327191543881997 DALSDLALHFLNK ddPTM_KYSE-520_SHP099_60min_R1 2 DALSDLALHFLNK 13 0 P50991-2;P50991 P50991-2 CCT4 T-complex protein 1 subunit delta 0 ; 176.05 6.3237e-07 286291100.0 617512.0 693723.0 518821.0 565608.0 704335.0 705417.0 448113.0 382087.0 473522.0 386882.0 False True 583257.3783803472 660395.5057805487 552265.0318029504 619363.2142637547 759762.157382043 701014.2308418491 493412.63520143053 380761.6293767758 387542.3413182227 383454.52646964166 1.5210600947920327 1.7222263924242205 1.4402360480328653 1.6152194628292909 1.98136181720675 1.8281547939879355 1.28675658035424 0.9929772713399458 1.0106604944430215 1.0 18.548695974390387 -6.971950852723892 3.6640625872406987 1.0132231582136186 1.684085960216003 0.8215314100636317 0.14400130888507143 0.10257660568845431 2.945977134391958 0.07545622130636226 0.04631741902040294 1.0667168302478807e-07 6.971950852723892 0.6708628020023844 DANSSFFDNSSS(ph)PHLLDQLK ddPTM_KYSE-520_SHP099_60min_R1 2 DANSSFFDNSSSPHLLDQLK 20 0 P49454 P49454 CENPF Centromere protein F 1 DANSSFFDNS(0.011)S(0.066)S(0.923)PHLLDQLK;DANSSFFDNS(0.011)S(0.428)S(0.561)PHLLDQLK 101.47 0.00049818 1205740000.0 565950.0 531320.0 489010.0 773980.0 485900.0 466220.0 438140.0 430160.0 581420.0 444760.0 True False 534555.6253066455 505794.58967242035 520532.367043664 847538.8264944269 524137.565607183 463310.1480444719 482431.46703432937 428667.875360099 475848.7844054567 440819.7724180445 1.2126398559085232 1.1473954239801158 1.1808280835234979 1.9226424936553816 1.1890064792967712 1.0510194347750332 1.0943961619235696 0.9724334119785775 1.0794633412091892 1.0 18.7498294100739 -5.995969396492526 24.99886950964152 1.0499328670157497 1.3643993369913654 0.3562860072081514 0.20659262723866548 145.32948784583934 901359.0612613151 0.06792758512666719 0.07669733528388746 1.0093240077874217e-06 5.995969396492526 0.31446646997561567 DAPIS(ph)PASIASSSSTPSSK ddPTM_KYSE-520_SHP099_60min_R1 1 DAPISPASIASSSSTPSSK 19 0 H7C4E4;Q04727-4;Q04727;Q04727-3;H0Y5S0 H7C4E4 TLE4 Transducin-like enhancer protein 4 1 DAPIS(0.999)PAS(0.001)IASSSSTPSSK 238.19 4.875e-22 0.0 143120.0 176960.0 143680.0 91213.0 115040.0 158990.0 127920.0 142980.0 176750.0 156130.0 True False 135180.8482973534 168458.57597762454 152941.84269612827 99881.85609581147 124092.99351193728 157997.68443565382 140851.40197889155 142484.03575178294 144656.65550490966 154746.809667302 0.8735614555672297 1.0886077479710383 0.9883359988160381 0.6454534107071579 0.8019098666959991 1.0210077013887462 0.9102055304514199 0.920755885424175 0.9347957209322397 1.0 17.239550140906353 -8.199578474413153 0.7970330860227001 0.999210870896895 0.901891797745214 0.061575579883595744 0.1152212074805319 3.3193927225112296 4.435747109398932 0.12423032928108375 0.04461789140704828 6.315700480493645e-09 8.199578474413153 -0.09731907315168098 DAPSGIGSIFLSASELEDGSEEMGQGAVSSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 DAPSGIGSIFLSASELEDGSEEMGQGAVSSSPR 33 0 O14879 O14879 IFIT3 Interferon-induced protein with tetratricopeptide repeats 3 1 DAPSGIGSIFLSASELEDGSEEMGQGAVS(0.005)S(0.268)S(0.727)PR;DAPSGIGSIFLSASELEDGSEEMGQGAVS(0.014)S(0.169)S(0.818)PR;DAPSGIGSIFLSASELEDGSEEMGQGAVS(0.063)S(0.211)S(0.726)PR;DAPSGIGSIFLSASELEDGSEEMGQGAVSS(0.021)S(0.978)PR;DAPSGIGSIFLSASELEDGSEEMGQGAVS(0.008)S(0.199)S(0.793)PR;DAPSGIGSIFLSASELEDGSEEMGQGAVS(0.014)S(0.203)S(0.783)PR;DAPSGIGSIFLSASELEDGSEEMGQGAVS(0.009)S(0.202)S(0.789)PR;DAPSGIGSIFLSASELEDGSEEMGQGAVS(0.002)S(0.034)S(0.964)PR;DAPSGIGSIFLSASELEDGSEEMGQGAVS(0.009)S(0.244)S(0.747)PR 229.81 2.2079000000000002e-23 789402000.0 452734.0 623419.0 481105.0 349017.0 400787.0 607836.0 407666.0 559431.0 679256.0 615853.0 True False 427619.9425171459 593469.0154690038 512117.7980952173 382187.47074421233 432326.6567339084 604042.270058684 448876.85771675105 557490.4644331764 555920.2330503127 610397.0215463841 0.7005603360150915 0.9722672203830636 0.8389913122410304 0.6261293178921088 0.7082712422787533 0.989589150563676 0.7353850721282409 0.913324352436757 0.9107518769373096 1.0 19.21938839694552 -7.701815301332136 0.8721373661924154 0.9985087862707384 0.7934791076292801 0.27475023027851886 0.11081923868979678 0.8120268127934553 1.2972635794841507 0.1082965927785254 0.040558884052238314 1.986939752176092e-08 7.701815301332136 -0.20502967864145827 DAPTS(ph)PASVASSSSTPSSK ddPTM_KYSE-520_SHP099_60min_R1 1 DAPTSPASVASSSSTPSSK 19 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;A0A0D9SES8;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726 H0YKH0 TLE3 Transducin-like enhancer protein 3 1 DAPT(0.027)S(0.973)PASVASSSSTPSSK 174.59 5.074499999999999e-09 937190000.0 531630.0 731910.0 453050.0 346080.0 447370.0 540770.0 421900.0 596990.0 690660.0 643660.0 True False 502139.4241218699 696747.9449806921 482254.32790562947 378971.33914725407 482575.4738128944 537394.853841554 464549.7693472037 594919.1810285136 565253.5541217586 637957.6731599022 0.7871046077942699 1.0921538752400182 0.7559346774793848 0.5940383744742044 0.7564380743672602 0.8423675683368692 0.7281827445482667 0.932537072689772 0.8860361398617106 1.0 19.283101182520994 -7.6597044572554305 1.5472465508586564 0.979631564217738 0.7971741887579965 0.21841452869995248 0.12175001082199 0.6546143018821229 2.9269281404026404 0.12142291963062478 0.03789047305272935 2.1892509293713404e-08 7.6597044572554305 -0.1824573754597415 DAPVHGS(ph)PTGPGAWTASK ddPTM_KYSE-520_SHP099_60min_R1 1 DAPVHGSPTGPGAWTASK 18 0 Q9BRP1 Q9BRP1 PDCD2L Programmed cell death protein 2-like 1 DAPVHGS(0.995)PT(0.005)GPGAWTASK 102.9 0.0003568 599390000.0 310130.0 247750.0 323510.0 239860.0 397300.0 282790.0 243130.0 273970.0 347520.0 380140.0 True False 292926.47067117237 235847.7181196687 344363.9722343013 262656.2222834612 428565.2496722246 281025.00271437597 267707.95312013675 273019.6620150785 284419.1282662867 376772.2553444447 0.77746295412166 0.6259689103276912 0.9139844225511887 0.6971219843227077 1.1374649900386928 0.7458749913988844 0.7105299005506616 0.7246278305855728 0.7548834189138239 1.0 18.523333206503494 -4.7573417653997385 24.99649201912911 0.8238957954025153 0.7017159554694451 0.12194018709499188 0.1409102787682474 233.09098733583969 1421860.4370830415 0.03612370951435601 0.08860689072054002 1.7484701991023803e-05 4.7573417653997385 -0.12217983993307024 DAQECLALS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 DAQECLALSPR 11 0 H3BUS0 H3BUS0 ARIH1 1 DAQECLALS(1)PR 64.55 0.031992 24729000.0 3904.3 6101.6 5150.1 6305.2 6051.7 3895.7 3658.2 5562.0 7992.8 5840.3 True False 3687.7206959709074 5808.469977311685 5482.0836864513485 6904.444312272498 6527.934360537119 3871.385491263457 4028.006556591468 5542.7067201805585 6541.509002091324 5788.559485684645 0.6370705363036864 1.003439628058808 0.9470549106403374 1.192774183170698 1.1277303751790027 0.6687994657112117 0.6958564676674569 0.9575278156660408 1.1300754562976774 1.0 12.498988655082792 DAQHYGGWEHR ddPTM_KYSE-520_SHP099_60min_R1 12 DAQHYGGWEHR 11 0 Q14697;Q14697-2;F5H6X6;E9PKU7 Q14697 GANAB Neutral alpha-glucosidase AB 0 ;;;;;;;;;;; 161.33 2.2938000000000003e-05 62422069000.0 18040814.0 17798211.0 12561051.0 11360134.0 17692112.0 16869502.0 13933093.0 13927380.0 13193958.0 12015102.0 False True 17040054.083948914 16943158.22790063 13370756.4458522 12439797.719811173 19084380.56005272 16764213.180593947 15341586.014323635 13879069.169454915 10798267.819814682 11908657.543887915 1.4308963055785135 1.4227597162365846 1.1227761312789368 1.0446011797690717 1.6025635542645797 1.4077332494289527 1.2882716593187837 1.1654604323203759 0.9067577751748234 1.0 23.505507452397943 -7.513665432543134 2.548586199785047 0.9535912573229083 1.329921886085102 0.49371849125629064 0.15225534194939577 0.2732177470985181 3.3536693579444035 0.1320486158879996 0.04496089748552867 3.064323187404909e-08 7.513665432543134 0.3763306287621938 DAQRLS(ph)PIPEEVPK ddPTM_KYSE-520_SHP099_60min_R1 15 DAQRLSPIPEEVPK 14 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK;DAQRLS(1)PIPEEVPK 177.12 7.4618e-09 51234470000.0 43734940.0 39159190.0 33585690.0 34587360.0 36440270.0 42893360.0 38138380.0 43916170.0 51160860.0 43738100.0 True False 41308875.69475856 37277923.733257435 35750677.316404015 37874532.295330994 39307911.9322257 42625646.62975595 41993779.64511967 43763835.05638118 41871337.48432768 43350614.46172687 0.952901734097197 0.8599168476878026 0.8246867492032289 0.8736792492011719 0.9067440547337485 0.9832766423043214 0.968700909238435 1.0095320585367742 0.9658764472945314 1.0 25.36954910689979 -6.14714393027586 2.5434266005999393 0.9866647090055066 0.8729898065844469 0.7179862026902957 0.03225145432567804 0.157877033923879 1.9942458399221124 0.012095403555035229 0.01204743108362936 7.126168214298453e-07 6.14714393027586 -0.11367490242105971 DARS(ph)PSGPSGSLENGTK ddPTM_KYSE-520_SHP099_60min_R1 4 DARSPSGPSGSLENGTK 17 1 Q14134-2;Q14134;E9PM74;E9PI31;E9PLI4;E9PJ94;E9PJD4 Q14134-2 TRIM29 Tripartite motif-containing protein 29 1 DARS(0.634)PS(0.366)GPSGSLENGTK;DARS(0.819)PS(0.18)GPSGSLENGTK;DARS(0.96)PS(0.04)GPSGSLENGTK;DARS(0.98)PS(0.02)GPSGSLENGTK 248.03 2.3225999999999998e-23 511800000.0 1066440.0 1131560.0 1237870.0 646040.0 899540.0 793130.0 628710.0 627570.0 1524870.0 737610.0 True False 1007282.4473045665 1077198.1590938116 1317665.0808620285 707439.4473609915 970328.6803175245 788179.7814733643 692266.1424182992 625393.1061459389 1247992.046844536 731075.3492518961 1.3778093439141548 1.473443414821879 1.8023656278527038 0.9676696773935941 1.3272622053396472 1.0781101869730703 0.9469149016263371 0.8554427485291344 1.707063503264878 1.0 19.479660581558285 -5.270446946784514 24.999086073813352 1.1189633178607687 1.5434298639529709 0.37698863668469573 0.250276069176054 656.4758581726691 1821944.3069816662 0.06913220380688491 0.10422539976827572 5.3647940351635455e-06 5.270446946784514 0.42446654609220213 DAS(ph)DDLDDLNFFNQK ddPTM_KYSE-520_SHP099_60min_R1 5 DASDDLDDLNFFNQK 15 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 DAS(1)DDLDDLNFFNQK;DAS(1)DDLDDLNFFNQK;DAS(1)DDLDDLNFFNQK;DAS(1)DDLDDLNFFNQK;DAS(1)DDLDDLNFFNQK 334.46 3.227e-54 837620000.0 2015761.0 1804223.0 1653620.0 1770502.0 1807021.0 1807138.0 1779103.0 1819842.0 2162495.0 1928161.0 True False 1903942.719010072 1717545.418886066 1760214.9910855466 1938769.9777591627 1949223.2721569412 1795858.981418196 1958952.093612035 1813529.3928563143 1769840.4200627396 1911078.9936265606 0.9962658400619294 0.8987307299248601 0.9210582068851446 1.014489711950658 1.0199595509435202 0.93970944550559 1.0250502988861951 0.9489557464157297 0.9260948532034254 1.0 20.865955982049773 -5.246152949102321 24.955292572901268 0.9815189119083195 0.9346895038608629 0.19633190758734365 0.039939952839140126 1254.930330906041 2048685.4680499563 0.010919266580985318 0.01882815526326998 5.673447636932177e-06 5.246152949102321 -0.04682940804745661 DAS(ph)IPVK ddPTM_KYSE-520_SHP099_60min_R1 1 DASIPVK 7 0 G3V3A5 G3V3A5 TTC6 1 DAS(1)IPVK 69.423 0.029091000000000002 307000000.0 1026200.0 1023300.0 881000.0 717840.0 828480.0 842600.0 821430.0 866840.0 1082600.0 842930.0 True False 969274.6403210165 974139.131995386 937790.6696498389 786063.2977735347 893676.6625936173 837341.0208534007 904468.1607842471 863833.1343619763 886027.1301251212 835462.2959896158 1.1601656292255513 1.1659881441346263 1.122481139066861 0.9408722590436384 1.0696792265592858 1.0022487248949512 1.0825960251298867 1.0339582510288567 1.0605231790569443 1.0 19.672215196061153 -5.0476432927616885 8.25262370416402 1.0314381446502816 1.1585983001709506 0.6830270783961762 0.038774370416751976 0.1718325929359886 28.002538167645856 0.010068833533770426 0.017703282855839626 8.961004743934476e-06 5.0476432927616885 0.12716015552066895 DAS(ph)PSKEER ddPTM_KYSE-520_SHP099_60min_R1 6 DASPSKEER 9 1 Q9BUQ8;F8W1J5;F8VVA2;Q9BUQ8-2 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 1 DAS(0.798)PS(0.202)KEER;DAS(0.884)PS(0.116)KEER;DAS(0.617)PS(0.383)KEER;DAS(0.949)PS(0.051)KEER;DAS(0.939)PS(0.061)KEER;DAS(0.575)PS(0.425)KEER 142.97 0.00024791 6927650000.0 7554500.0 5588250.0 5404070.0 6202570.0 6462970.0 6280080.0 6943540.0 5952030.0 7467400.0 7306830.0 True False 7135436.825477618 5319782.0818657465 5752424.999017722 6792060.387929322 6971568.969730927 6240883.691242608 7645460.785620007 5931383.797144244 6111508.397835146 7242097.170827726 0.9852721742287921 0.7345637536174799 0.7943037580591115 0.9378582236218508 0.9626450467709093 0.8617508912172349 1.0556970729993918 0.8190146662263473 0.8438865502182483 1.0 22.787976103626637 -5.268267403651689 24.572179140343408 0.9225693787099467 0.8276982807760795 0.16347953713584973 0.08988354458460249 696.0214062544867 2504792.13756109 0.02487036429471879 0.03786633762290571 5.391785374630238e-06 5.268267403651689 -0.09487109793386717 DASDDLDDLNFFNQK ddPTM_KYSE-520_SHP099_60min_R1 3 DASDDLDDLNFFNQK 15 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 ;; 206.69 2.1159000000000005e-11 274736000.0 314747.0 335723.0 1042640.0 230338.0 421482.0 343821.0 312755.0 323981.0 726142.0 464629.0 False True 297287.3564774109 319594.3631495031 1109850.242682985 252229.25426635524 454650.2354954651 341675.08560507535 344371.32759465417 322857.1855287337 594292.91735019 460512.748535892 0.6455572781048439 0.6939967767789041 2.4100315272737434 0.5477139450933066 0.9872695966418615 0.7419449009638991 0.7477997703418935 0.7010819712487731 1.290502639155214 1.0 18.812881569938934 DASIVGFFDDSFSEAHSEFLK ddPTM_KYSE-520_SHP099_60min_R1 16 DASIVGFFDDSFSEAHSEFLK 21 0 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ;;;;;;;;;;;;;;; 401.6 3.5985999999999995e-93 2549876000.0 1809029.0 1847231.0 1347301.0 4056906.0 1723870.0 1261958.0 1705093.0 2031614.0 1516398.0 1121952.0 False True 1708678.5551600936 1758487.2500097412 1434150.1782178201 4442473.1264867345 1859528.7615214137 1254081.652022449 1877460.440544042 2024566.805216273 1241058.3484827946 1112012.3781454468 1.536564330344716 1.581355823522801 1.289689041600074 3.994985320123547 1.6722194807063513 1.127758716241934 1.6883449118391718 1.8206333355683815 1.1160472427047652 1.0 20.084741416548958 -5.99042787063288 24.998845219886427 1.4204057758171198 2.109126783810844 0.18440476815435025 0.7362948795643571 406.29667174653724 1061088.337120329 0.2375447577377932 0.26902902505834936 1.0222853317442038e-06 5.99042787063288 0.6887210079937243 DASPS(ph)KEER ddPTM_KYSE-520_SHP099_60min_R1 1 DASPSKEER 9 1 Q9BUQ8;F8W1J5;F8VVA2;Q9BUQ8-2 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 1 DAS(0.348)PS(0.652)KEER 69.846 0.0451 1166800000.0 1649400.0 1321100.0 1191100.0 1301400.0 1408700.0 1371700.0 1552400.0 1249700.0 1590500.0 1502700.0 True False 1557904.4940026165 1257632.3729884727 1267880.2118273834 1425084.664719824 1519556.675593412 1363138.7114937205 1709331.741963969 1245365.0823821735 1301705.2932421996 1489387.2470829107 1.0460036481807553 0.8443958248277275 0.8512763986066301 0.9568261494859522 1.0202562688579417 0.915234579968065 1.1476744851359766 0.8361593566893533 0.873987135173675 1.0 20.506287478926048 -4.20360933824518 21.605527072853306 0.9395268247225013 1.0460078134128448 0.10770028487353944 0.09284794460480258 32203.219774610756 12028976.793441944 0.02364415191177366 30.766090788721705 6.257353085840156e-05 4.20360933824518 0.1064809886903435 DASSS(ph)PASTASSASSTSLK ddPTM_KYSE-520_SHP099_60min_R1 2 DASSSPASTASSASSTSLK 19 0 Q04724;A0A669KBK8 Q04724 TLE1 Transducin-like enhancer protein 1 1 DASSS(0.998)PAS(0.002)TASSASSTSLK;DASSS(0.995)PAS(0.005)TASSASSTSLK 432.59 8.895099999999997e-124 1867730000.0 1738940.0 1914990.0 1279470.0 1228220.0 1217490.0 1769510.0 1291220.0 1708910.0 1872870.0 1832380.0 True False 1642477.531709051 1822991.0059414082 1361946.683424383 1344949.6595221923 1313299.5364294904 1758465.8317235948 1421749.1186928104 1702982.1900725937 1532804.0192106357 1816146.538770067 0.9043750031433981 1.0037686756135749 0.749910128037753 0.7405512885722431 0.7231242129387229 0.9682400589296418 0.7828383273827942 0.93768985801437 0.8439869726859612 1.0 20.7924491828713 -10.308825482603508 7.633752004933584 1.0000007985934738 0.8491051801602358 0.18102194016813233 0.09535628784704313 1.3521374380071786e-06 1.2237627329982475e-07 0.09630123674806329 0.023356356749414955 4.911051827811713e-11 10.308825482603508 -0.15089561843323795 DASVPLIDVTNLPT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 DASVPLIDVTNLPTPR 16 0 Q96A65-2;Q96A65 Q96A65-2 EXOC4 Exocyst complex component 4 1 DASVPLIDVTNLPT(1)PR;DASVPLIDVT(0.001)NLPT(0.999)PR;DASVPLIDVT(0.023)NLPT(0.977)PR;DASVPLIDVTNLPT(1)PR 155.24 1.4802e-05 626000000.0 433325.0 581116.0 378474.0 344076.0 331588.0 438188.0 346143.0 441465.0 526610.0 483301.0 True False 409287.5984380279 553198.3150871007 402871.03961981065 376776.8795897789 357682.0891223593 435453.1061544142 381134.51247013285 439933.6609537054 430990.8987577961 479019.32914248784 0.8544281483812155 1.1548559346809737 0.8410329502590358 0.7865588227186211 0.7466965680960321 0.9090512212397288 0.7956558102830994 0.9184048204093322 0.899735924079161 1.0 18.869724346463784 -4.814984734765586 24.99988703448561 0.8517060495650062 1.004643830009256 0.24836148648418588 0.09782145118233429 98.19019542917124 45843.72474650606 0.024388482860504282 0.05076875115686401 1.5311412795884365e-05 4.814984734765586 0.15293778044424977 DAT(ph)PPVS(ph)PINMEDQER ddPTM_KYSE-520_SHP099_60min_R1 2 DATPPVSPINMEDQER 16 0 P17275 P17275 JUNB Transcription factor jun-B 2 DAT(1)PPVS(1)PINMEDQER;DAT(1)PPVS(1)PINMEDQER 188.1 4.6092e-09 787030000.0 875030.0 859960.0 802480.0 816420.0 893010.0 855220.0 836410.0 903000.0 1102150.0 875090.0 True False 826490.3415709414 818646.2307737245 854209.1448133976 894012.311334377 963284.8064681414 849882.2547522485 920962.4853749583 899867.703761784 902027.3429405156 867337.3834097171 0.9529052446947508 0.9438613467292558 0.9848637463950772 1.0307549616042078 1.1106229535284542 0.9798750417180818 1.061827269285255 1.0375059590123767 1.0399959233792317 1.0 19.72623376741292 -5.101378511018638 2.741242675864603 1.0407140795303118 0.9493739240674307 0.5477943766275757 0.03293928621274441 0.19293317160407697 2.80693474437375 0.00908427865565384 0.018767472570654507 7.918109238183533e-06 5.101378511018638 -0.0913401554628811 DATNRS(ph)PTQIVK ddPTM_KYSE-520_SHP099_60min_R1 3 DATNRSPTQIVK 12 1 A7KAX9;A7KAX9-2;G3V174 A7KAX9 ARHGAP32 Rho GTPase-activating protein 32 1 DATNRS(0.996)PT(0.004)QIVK;DATNRS(0.5)PT(0.5)QIVK;DAT(0.027)NRS(0.963)PT(0.01)QIVK 172.26 1.2256e-06 1368560000.0 1055130.0 931870.0 893080.0 804060.0 977010.0 860050.0 802950.0 805230.0 1178710.0 914710.0 True False 996599.8355504913 887101.5664346126 950649.3657785237 880477.6206505467 1053895.1285735206 854682.1089306502 884120.0220368259 802436.8450720945 964685.976861058 906606.3810336114 1.0992640868182282 0.9784859063348291 1.0485800515706711 0.9711795979714201 1.1624616268109507 0.9427267740562746 0.9751972195792963 0.8850994895461088 1.0640626373721644 1.0 19.79011678992185 DATNVGDEGGFAPNILENK ddPTM_KYSE-520_SHP099_60min_R1 3 DATNVGDEGGFAPNILENK 19 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ;; 342.36 5.2457e-64 2869010000.0 805750.0 882120.0 2328100.0 534480.0 995140.0 887990.0 759270.0 749760.0 1515810.0 1068440.0 False True 761053.4412771977 839741.6311108867 2478173.0510917054 585276.8185027287 1073451.8564279315 882447.7250268348 836024.4213611066 747159.2575552992 1240577.1144605193 1058974.4528337407 0.7186702561527074 0.7929762883927912 2.340163206449683 0.5526826609806963 1.0136711547246964 0.8333040732620763 0.7894660906351086 0.7055498416944374 1.1714891810098182 1.0 20.01423635486345 DAVDWVHYK ddPTM_KYSE-520_SHP099_60min_R1 3 DAVDWVHYK 9 0 P49902-2;P49902;Q5JUV3;Q5JUV4 P49902-2 NT5C2 Cytosolic purine 5-nucleotidase 0 ;; 102.07 0.0036921999999999996 680964000.0 1067540.0 969649.0 634898.0 571361.0 1042821.0 884455.0 719885.0 726081.0 725062.0 776635.0 False True 1008321.4281117705 923065.6065671793 675824.5409527173 625662.9776540509 1124885.0798601513 878934.7882730769 792658.00120055 723562.3944795801 593409.0181256055 769754.6181128861 1.3099257924346719 1.1991686504332344 0.8779739998306918 0.8128083455840939 1.4613554155971098 1.1418376292796457 1.0297541353422646 0.9399909756351318 0.7709067333436652 1.0 19.55403909212564 -7.159853618554896 2.54921092763564 0.8835502102863984 1.1235213916090319 0.23667003195884218 0.18451709144163814 0.47943380737128893 6.000660534482267 0.11712373619030834 0.05692854601343719 6.920641958169059e-08 7.159853618554896 0.2399711813226335 DAVFIPAGWDNEKK ddPTM_KYSE-520_SHP099_60min_R1 1 DAVFIPAGWDNEKK 14 1 O43237;O43237-2 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 0 142.85 0.0057491999999999994 0.0 247960.0 229640.0 160220.0 156390.0 240850.0 190110.0 156500.0 179220.0 221310.0 195130.0 False True 234205.16450399495 218607.74970333287 170548.03756106392 171253.2585796321 259803.524750957 188923.452972276 172320.54729281212 178598.32765026245 181125.6827710979 193401.30000884266 1.2109803010284144 1.1303323694997796 0.881835011208643 0.8854814242293205 1.3433390816870328 0.9768468617513846 0.8909999430455395 0.9234598094330111 0.9365277418653157 1.0 17.561237966821405 -6.508597978252119 24.761157400353447 0.9317334741132338 1.0786869610679115 0.23424918179944143 0.1314152077300237 978.8848996420454 1697275.8937349026 0.049926271380282786 0.042369885842997314 3.100287874568973e-07 6.508597978252119 0.1469534869546777 DAVIEFLLDK ddPTM_KYSE-520_SHP099_60min_R1 1 DAVIEFLLDK 10 0 A2A2L6;A2A2L5;A0A0A0MQR2;Q9BY42 A2A2L6 RTFDC1 Protein RTF2 homolog 0 147.12 0.0013819000000000001 23316000.0 55394.0 70161.0 97876.0 73882.0 80258.0 64545.0 66857.0 66679.0 92316.0 65150.0 False True 52321.184394798685 66790.36024619192 104185.24356713712 80903.72306656669 86573.84799444601 64142.150713247895 73615.558021441 66447.70611199559 75553.74149698003 64572.821685933035 0.8102663478030522 1.0343416704173851 1.61345347542453 1.2529067331154167 1.3407165078757248 0.9933304606885568 1.1400393555587474 1.0290351943296137 1.170054823753182 1.0 15.978639450515123 -6.269883656141981 24.63637733394304 1.072903381311044 1.2253197839055499 0.11165750121390061 0.20024585769385908 1258.3260239882711 3671185.730205275 0.07439410132548833 0.06672989968197315 5.371756819672417e-07 6.269883656141981 0.15241640259450584 DAVLLLFANK ddPTM_KYSE-520_SHP099_60min_R1 1 DAVLLLFANK 10 0 U3KQF2;C9JPM4;C9JAK5;P18085 U3KQF2 ARF4 ADP-ribosylation factor 4 0 147.51 0.0013563 49673000.0 70089.0 77329.0 81171.0 73809.0 100270.0 84879.0 64351.0 70373.0 95252.0 69993.0 False True 66201.02345104246 73613.9987668047 86403.41253819194 80823.78516851489 108160.67854174152 84349.23867673356 70856.22708523808 70128.89248818172 77956.63790751706 69372.91647373006 0.9542776463219804 1.0611345537805181 1.2454920007710926 1.165062524063278 1.5591196685914093 1.215881398163139 1.0213816960120123 1.0108972788355803 1.1237330340153344 1.0 16.082084917061273 -6.758701624375061 24.70381334175169 1.039911091293592 1.210623299737875 0.21692397729629975 0.14920895388129374 103.01535064582946 929561.0888168998 0.0639827369875045 0.04728513335999934 1.7430039673161478e-07 6.758701624375061 0.17071220844428292 DAVLLVFANK ddPTM_KYSE-520_SHP099_60min_R1 2 DAVLLVFANK 10 0 P61204-2;P84077;P61204;C9J1Z8;F5H423;P84085 P61204-2 ARF3;ARF1;ARF5 ADP-ribosylation factor 3;ADP-ribosylation factor 1;ADP-ribosylation factor 5 0 ; 146.81 0.0014025 192055000.0 614530.0 895690.0 1014140.0 769850.0 1051280.0 1006310.0 825280.0 858550.0 1120410.0 815180.0 False True 580440.7958648171 852659.7079419 1079513.0870813709 843016.3125361567 1134009.7550350272 1000029.2460182592 908707.3563566246 855571.890437077 916971.787237657 807958.139400443 0.7184045404821859 1.0553265897842536 1.3361002686134695 1.0433910761289307 1.4035501342638068 1.2377240815475234 1.1246960851597387 1.0589309627748371 1.1349248711302162 1.0 19.62392102280518 -4.324175478341776 3.367072006938205 1.1755113663803483 0.6868571386986116 0.5461055776584072 0.12236961801626002 0.19309744874262724 3.6423861413113596 0.03087873019669148 0.2187201632471926 4.740504046844181e-05 4.324175478341776 -0.4886542276817366 DAVS(ph)PFSFSLLK ddPTM_KYSE-520_SHP099_60min_R1 2 DAVSPFSFSLLK 12 0 Q8NB46 Q8NB46 ANKRD52 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C 1 DAVS(0.996)PFS(0.004)FSLLK;DAVS(0.989)PFS(0.011)FSLLK 192.65 7.254800000000001e-08 478530000.0 750830.0 749440.0 587030.0 561660.0 533470.0 655740.0 572960.0 661530.0 841790.0 732900.0 True False 709179.9631575035 713435.777467626 624870.8930812092 615039.997530763 575451.0539709077 651647.2834255971 630880.3883507324 659235.3068322627 688942.1557990265 726407.0761875713 0.976284491719875 0.9821432098541454 0.8602213738896127 0.8466877838782902 0.792188117151981 0.8970827856546515 0.8684942768754469 0.9075287513609467 0.948424345498982 1.0 19.4704187309354 -9.404050179635558 8.650757473393227 1.000041437543702 0.8938679913622564 0.22452082734704115 0.056656007221372345 0.0 0.0 0.060383525770346204 0.01464515616460844 3.944117279751733e-10 9.404050179635558 -0.10617344618144553 DAVSGMGVIVHIIEK ddPTM_KYSE-520_SHP099_60min_R1 2 DAVSGMGVIVHIIEK 15 0 P49720 P49720 PSMB3 Proteasome subunit beta type-3 0 ; 123.38 0.00017033 234270000.0 564900.0 363830.0 274670.0 638240.0 422100.0 378450.0 372780.0 397280.0 307880.0 223795.0 False True 533563.870899769 346351.06068003597 292375.66768753866 698898.1377061474 455316.8685795267 376087.95317110035 410464.2403822012 395901.9284058488 251976.75302320538 221812.35040987545 2.405474131236715 1.5614597656083258 1.3181216787400383 3.150853126143292 2.0527119781119962 1.6955230512464572 1.850502190810051 1.784850697782528 1.1359906360380327 1.0 17.758980170770634 -7.6845414060759065 1.177874535735225 0.9619782750819137 2.029789144362522 0.3765647444267576 0.47629233934435383 0.5206897500613972 1.4191390413897487 0.4622975925511459 0.1534495677214921 2.0675622490426072e-08 7.6845414060759065 1.0678108692806083 DAVSS(ph)PQKR ddPTM_KYSE-520_SHP099_60min_R1 2 DAVSSPQKR 9 1 O00472;D6RC27 O00472 ELL2 RNA polymerase II elongation factor ELL2 1 DAVS(0.089)S(0.911)PQKR;DAVS(0.206)S(0.794)PQKR 90.82700000000001 0.0042475 876610000.0 1854120.0 1704680.0 1730030.0 1672470.0 1722100.0 1750600.0 1666880.0 1688700.0 2163100.0 1953220.0 True False 1751268.2675034127 1622784.6140231544 1841550.5019458728 1831421.0459535592 1857619.472591336 1739673.856047901 1835384.4975811027 1682842.2938455436 1770335.56731355 1935915.9903821673 0.904619971219772 0.8382515677773817 0.9512553804477508 0.9460229963760051 0.9595558287757234 0.8986308624396836 0.9480703226273683 0.8692744427992123 0.91446921049713 1.0 20.88458491713877 DAVTYTEHAK ddPTM_KYSE-520_SHP099_60min_R1 10 DAVTYTEHAK 10 0 P62805 P62805 HIST1H4A Histone H4 0 ;;;;;;;;; 192.38 4.8257e-06 52336160000.0 28266180.0 48458060.0 17634680.0 31222800.0 43711670.0 45628370.0 41049260.0 21756430.0 34384800.0 27304660.0 False True 26698198.648167133 46130062.06056909 18771439.689285647 34190205.52452289 47151529.7436191 45343586.417845495 45198919.80297077 21680962.022318915 28141387.09026993 27062761.95510406 0.986528968937401 1.7045585419957079 0.6936261613070627 1.2633671899875907 1.7423029409134747 1.675497367676977 1.6701517708338047 0.801136338496665 1.0398564321319184 1.0 24.68980574874376 -7.2721507096614015 24.834600450371656 0.9403722733325294 1.3956711966637028 0.2768709901252806 0.3286054628487088 946.9380912913023 2195495.9043742423 0.1855598652491525 0.0905931173575363 5.3437888608372444e-08 7.2721507096614015 0.4552989233311734 DAVTYTEHAKR ddPTM_KYSE-520_SHP099_60min_R1 4 DAVTYTEHAKR 11 1 P62805 P62805 HIST1H4A Histone H4 0 ;;; 168.3 2.8923e-05 5279020000.0 7841040.0 7360464.0 4646250.0 7315461.0 6731979.0 6785560.0 9637350.0 7262983.0 10879910.0 6581120.0 False True 7406081.8804742815 7006856.261158301 4945754.709262846 8010720.213966455 7261747.447579079 6743208.80306432 10611587.389472082 7237789.407165978 8904392.604211712 6522816.396833881 1.1354116734098372 1.074207188256804 0.7582238113682723 1.2281075729580233 1.1132840487590405 1.0337879211712009 1.6268413433532878 1.1096110892649285 1.3651147085074828 1.0 22.63706358967351 DAVTYTEHAKRK ddPTM_KYSE-520_SHP099_60min_R1 1 DAVTYTEHAKRK 12 2 P62805 P62805 HIST1H4A Histone H4 0 111.63 0.00024895 686220000.0 1842300.0 1696800.0 1423200.0 1701000.0 1855100.0 1645600.0 2587300.0 1513000.0 3054900.0 1503100.0 False True 1740103.946466001 1615283.1810512743 1514941.7492005134 1862662.5285757028 2001085.8159248508 1635329.1999956744 2848849.533614648 1507751.756136855 2500207.1677620844 1489783.703394106 1.1680245545051955 1.0842400661057365 1.0168870459175323 1.2502905786471448 1.3432056018372793 1.097695723392583 1.9122571465402962 1.012060846619421 1.678235009596344 1.0 20.50667145525166 -5.622404823227407 1.6772441309083266 1.370186392246223 1.08778282619152 0.1366638920427634 0.2726588225809789 0.665417322608828 3.835823937567803 0.0890356235796003 0.13440492167024407 2.3855865457183876e-06 5.622404823227407 -0.28240356605470307 DAVVGRPS(ph)MDKK ddPTM_KYSE-520_SHP099_60min_R1 2 DAVVGRPSMDKK 12 2 F5H6I7;Q6DD88 F5H6I7 ATL3 Atlastin-3 1 DAVVGRPS(1)MDKK;DAVVGRPS(1)MDKK 131.24 4.7452e-05 1259690000.0 853930.0 795270.0 721210.0 952520.0 779050.0 892100.0 834140.0 893480.0 1131840.0 656950.0 True False 806560.8006327477 757064.0354753931 767700.3505767996 1043047.2144144207 840356.8028118451 886532.0729923082 918463.0116218928 890380.7264197989 926326.387364509 651129.9340993668 1.2387094470604714 1.162692722033357 1.1790278873273907 1.6019033372458111 1.2906130693779485 1.361528669724801 1.410567942775196 1.3674394000198444 1.422644450597698 1.0 19.31258593883547 DAYIIFDTEIEST(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 3 DAYIIFDTEIESTSPK 16 0 J3QT38;A0A0U1RRB6;Q9Y2D4-2;Q9Y2D4 J3QT38 EXOC6B Exocyst complex component 6B 1 DAYIIFDTEIES(0.089)T(0.823)S(0.089)PK;DAYIIFDTEIES(0.052)T(0.474)S(0.474)PK;DAYIIFDTEIES(0.077)T(0.867)S(0.056)PK 168.41 0.00029321 28082000.0 171130.0 186979.0 162048.0 154227.0 154785.0 164695.0 156195.0 173950.0 231988.0 182003.0 True False 161637.07776080252 177996.2481787993 172493.87336596716 168884.68770996152 166965.69889382113 163667.07741449162 171984.7149162986 173346.6080502353 189864.8271415726 180390.5950161913 0.8960393846824136 0.9867268754383947 0.9562243161872416 0.9362167007365486 0.9255787358472586 0.9072927410644738 0.953401782952497 0.9609514732997929 1.0525206545525887 1.0 17.46076459752454 -7.616157139375275 4.639233525822272 1.0252478689029207 0.9394075056082066 0.6259503952614041 0.02700031060679891 0.13818874806534534 5.080624902588842 0.020041770223637435 0.006995474740816495 2.4201532120443526e-08 7.616157139375275 -0.08584036329471412 DAYIIFDTEIESTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 DAYIIFDTEIESTSPK 16 0 J3QT38;A0A0U1RRB6;Q9Y2D4-2;Q9Y2D4 J3QT38 EXOC6B Exocyst complex component 6B 1 DAYIIFDTEIES(0.001)T(0.207)S(0.792)PK;DAYIIFDTEIEST(0.003)S(0.997)PK 258.92 3.1342e-29 31779000.0 168146.0 188542.0 152759.0 134069.0 136934.0 163941.0 142064.0 165410.0 209760.0 166388.0 True False 158818.6061892593 179484.1593126881 162606.08956304187 146810.87745068534 147709.92675211772 162917.78340817385 156425.21553102916 164836.2313169844 171672.8716192919 164913.9317679052 0.9630393532353333 1.0883504952467484 0.9860057778010453 0.8902272590123099 0.8956788863660115 0.9878958173009867 0.9485263849701747 0.999528842408353 1.0409846504714897 1.0 17.331353755828683 -9.376508465350863 9.999665568749252 1.0000000712263337 0.9763801724571466 0.012967043347476115 0.05688677178985417 0.0 0.0 0.05982573422870367 0.014509871844416187 4.2023433630965473e-10 9.376508465350863 -0.02361989876918713 DCDENKENKT(ph)PEGSQGEVDWLQQYDMER ddPTM_KYSE-520_SHP099_60min_R1 1 DCDENKENKTPEGSQGEVDWLQQYDMER 28 2 Q86T82-2;Q86T82 Q86T82-2 USP37 Ubiquitin carboxyl-terminal hydrolase 37 1 DCDENKENKT(0.95)PEGS(0.05)QGEVDWLQQYDMER 64.318 0.025373 196850000.0 69256.0 62595.0 61877.0 42206.0 79472.0 51924.0 47640.0 56156.0 64353.0 52312.0 True False 65414.23162158677 59587.84224298946 65865.6904267005 46217.24555030338 85725.99426617412 51599.92305577015 52455.91612159466 55961.207942908935 52668.117407114274 51848.55637812015 1.2616403655394979 1.1492671427229024 1.2703476244614502 0.8913892455028284 1.6533921145459336 0.9952046240104205 1.0117141109782337 1.0793204642921226 1.0158068244565432 1.0 15.662016200118883 DCDPGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 DCDPGSPR 8 0 Q00341;Q00341-2;A0A024R4E5;H0Y394 Q00341 HDLBP Vigilin 1 DCDPGS(1)PR;DCDPGS(1)PR 73.84100000000001 0.023855 11482500000.0 2808000.0 2195890.0 2176320.0 2262300.0 2473900.0 2498400.0 2523600.0 2126790.0 2725600.0 2442100.0 True False 2652234.6423907746 2090396.148301912 2316609.0694351178 2477308.3118147054 2668581.8554344727 2482806.558865576 2778710.1159625584 2119412.661886516 2230699.7467846214 2420464.893925047 1.0957542284738069 0.863634152905274 0.9570926127660064 1.0234845041679081 1.1025079777575608 1.0257560707023663 1.1480067828856537 0.8756221448226246 0.9215997110238188 1.0 21.206852739033156 -7.295930748358146 24.984877160396355 0.9239581984237325 1.0238917597750563 0.23352847343393413 0.08063612402836634 987.653218757448 715431.4458750043 0.0459670414641995 0.022083025511676763 5.059053261210815e-08 7.295930748358146 0.09993356135132381 DCDPGS(ph)PRR ddPTM_KYSE-520_SHP099_60min_R1 3 DCDPGSPRR 9 1 Q00341;Q00341-2;A0A024R4E5;H0Y394 Q00341 HDLBP Vigilin 1 DCDPGS(1)PRR;DCDPGS(1)PRR;DCDPGS(1)PRR 79.693 0.018162 656650000.0 926670.0 866980.0 895170.0 774570.0 827620.0 766410.0 735300.0 755560.0 1041700.0 726010.0 True False 875265.7678291537 825328.9794364886 952874.0905226418 848184.8999170385 892748.9854863487 761626.5509046455 809631.2998364512 752939.1387090288 852553.5391200243 719578.1162272326 1.2163596253012745 1.1469623114217404 1.3242121585333726 1.178725256910389 1.2406561085640786 1.0584348435967925 1.1251471960839634 1.0463619191988618 1.184796368725032 1.0 19.456791786525763 -6.258808430992156 24.996671177705167 1.0884831291315173 1.220591453924409 0.5475599270648693 0.0628161093092293 184.045557620114 1748628.821898718 0.020084373219041527 0.019213995368792324 5.510507134453761e-07 6.258808430992156 0.13210832479289158 DCFGCLR ddPTM_KYSE-520_SHP099_60min_R1 4 DCFGCLR 7 0 O75531 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 0 ;;; 122.15 0.018359999999999998 1902930000.0 1656390.0 2005320.0 1354780.0 1261630.0 2053450.0 1936000.0 1684240.0 1684150.0 1655170.0 1685600.0 False True 1564506.7447683956 1908981.4171533128 1442111.2865246434 1381534.935877108 2215044.8324677288 1923916.7058772636 1854499.4157983724 1678308.0767335633 1354632.851440234 1670666.8953769559 0.9364564229396506 1.1426463422695556 0.8631949854966492 0.8269362011661754 1.3258446902833636 1.1515860589571127 1.110035412163918 1.0045737312313736 0.8108335989590466 1.0 20.671992680764294 -3.9742707850906918 16.30919291900457 1.031418810688691 0.686984141787934 0.028318795895288518 0.1549699742389744 555079455.962552 9289368264.418495 0.04062628519362087 5063464189.067612 0.00010610337902822639 3.9742707850906918 -0.344434668900757 DCGATWVVLGHSER ddPTM_KYSE-520_SHP099_60min_R1 10 DCGATWVVLGHSER 14 0 P60174;P60174-3;P60174-4;U3KPZ0;U3KQF3;U3KPS5 P60174 TPI1 Triosephosphate isomerase 0 ;;;;;;;;; 222.29 7.9837e-14 25226290000.0 16062310.0 14708490.0 10241420.0 12007460.0 15753360.0 15313570.0 11891960.0 13335330.0 11848870.0 12458100.0 False True 15171301.644878857 14001872.062506417 10901598.320051387 13148645.388225516 16993059.807642657 15217992.329349624 13094115.371145219 13289072.852719426 9697413.893705567 12347730.92625514 1.228671221901987 1.1339631666846623 0.8828827243774139 1.064863290814621 1.3762091115469721 1.2324525388702317 1.0604470934253216 1.0762360252330003 0.7853599946113039 1.0 23.557742614345003 -7.6036434546328024 5.3150627112813105 0.8949186485443714 1.1351345257090504 0.35215737173512873 0.1318937800480261 0.25010652875230444 11.957989609748925 0.10197222971108116 0.03665339346819493 2.4909014495028814e-08 7.6036434546328024 0.24021587716467896 DCHEEVYAGSHQYPGR ddPTM_KYSE-520_SHP099_60min_R1 2 DCHEEVYAGSHQYPGR 16 0 Q9H3P7 Q9H3P7 ACBD3 Golgi resident protein GCP60 0 ; 193.77 3.3144e-12 108331000.0 39298.0 38242.0 30703.0 26917.0 39025.0 42514.0 24859.0 36682.0 32447.0 33269.0 False True 37118.0616013792 36404.79691758773 32682.16450653693 29475.183587108855 42096.045478123706 42248.65435623242 27371.99032046015 36554.758703643136 26555.442722307223 32974.26254289033 1.1256676795454925 1.1040367277428944 0.9911416355112277 0.8938845424903697 1.2766334174530358 1.281261538488653 0.8301016674704041 1.1085845712575249 0.8053384874875061 1.0 15.009052774049406 -6.775901263658944 24.999927422577233 0.9450549423982945 1.1037988049661884 0.28920714060855945 0.13457143998936255 375.2083778298679 648608.3240389464 0.0586321399776293 0.03972655948162548 1.6753237156147592e-07 6.775901263658944 0.15874386256789397 DCHEKYDK ddPTM_KYSE-520_SHP099_60min_R1 3 DCHEKYDK 8 1 A6NHR9;J3KTL8;A6NHR9-2 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 0 ;; 138.66 0.00065009 1250790000.0 2843670.0 3394630.0 1497560.0 1291310.0 2885760.0 3464460.0 1627130.0 1909420.0 2055130.0 2821220.0 False True 2685925.956384395 3231546.8793564886 1594095.1137807197 1414035.7141534926 3112852.8942716247 3442837.020063818 1791616.1796584856 1902796.6676819783 1681970.1976113438 2796226.185675948 0.9605538958698759 1.1556815024158384 0.5700880429296781 0.505694325229155 1.113233582539796 1.2312441095431488 0.6407264865897777 0.6804873931262482 0.6015143575392673 1.0 21.415049633812497 DCLCQLCAQPMSSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 DCLCQLCAQPMSSSPK 16 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;A0A494C1P1;A0A494C1G0 F8W8M4 ABLIM1 Actin-binding LIM protein 1 1 DCLCQLCAQPMSS(0.017)S(0.983)PK;DCLCQLCAQPMSS(0.002)S(0.998)PK;DCLCQLCAQPMSS(0.005)S(0.995)PK 248.1 2.2903000000000004e-23 2278570000.0 4199800.0 4182700.0 3237240.0 3012410.0 3495600.0 4195200.0 3247440.0 4205800.0 5034400.0 4758600.0 True False 3966828.7219062624 3981756.813639305 3445917.6701671337 3298708.540685904 3770683.832756673 4169016.2006695727 3575722.9271601825 4191211.061441097 4120279.8668962736 4716442.506134776 0.8410637290174797 0.8442288458854634 0.7306179743917064 0.6994060748954757 0.7994762636991896 0.8839323696296192 0.7581398315593085 0.8886382174678267 0.873599086925567 1.0 22.169267650546264 -7.998889836301707 0.6910519481154348 1.0002383000498913 0.78513912014153 0.5774871845718281 0.05456349385450123 0.5884600723295318 0.6516408132103784 0.05803436455988038 0.02333324070117588 1.0025595163659572e-08 7.998889836301707 -0.21509917990836136 DCQLNAHKDHQYQFLEDAVR ddPTM_KYSE-520_SHP099_60min_R1 1 DCQLNAHKDHQYQFLEDAVR 20 1 Q13263-2;Q13263;M0R2I3;M0R3C0 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 0 156.92 8.393899999999999e-07 702210000.0 2189700.0 1954700.0 1826700.0 1178100.0 2033600.0 1699100.0 1702900.0 1689000.0 2078400.0 1596900.0 False True 2068232.9759412704 1860793.2779354826 1944452.0048233408 1290066.2697913183 2193632.750398777 1688495.2866508572 1875045.7507024263 1683141.2532155653 1701014.9522003043 1582752.7083694022 1.3067315980599548 1.1756689899160089 1.2285254636061067 0.8150775942253051 1.3859605096861412 1.0668092859499156 1.1846738538417367 1.0634265506641187 1.0747193438403522 1.0 20.594004433593632 -4.558366355510586 1.7867733247012099 1.1032100548042247 1.3055096041686371 0.17621231805005977 0.1403419016349745 0.9314114593594411 4.602941607320349 0.03776554088362524 0.2630918784904399 2.7646085352120685e-05 4.558366355510586 0.2022995493644124 DCSYGAVT(ph)SPTSTLESR ddPTM_KYSE-520_SHP099_60min_R1 1 DCSYGAVTSPTSTLESR 17 0 Q9HCD6;Q9HCD6-2;J3KRP9;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 DCSYGAVT(0.606)S(0.389)PT(0.003)S(0.001)TLESR 80.361 0.033625 209800000.0 148550.0 159020.0 117860.0 115070.0 112390.0 163970.0 141170.0 176590.0 200940.0 148360.0 True False 140309.63537291676 151380.4405061137 125457.44418266763 126006.21820294308 121234.45358837457 162946.60240841692 155440.84128642958 175977.45050641574 164454.3612851853 147045.64582233343 0.9541910240745558 1.0294792454379624 0.8531870731776067 0.8569190709338579 0.8244681636806506 1.108136194697636 1.0570924451189774 1.1967539026557705 1.1183898738755296 1.0 17.165904539562636 -6.275952113517746 24.751774890236202 1.1059352443414 0.9052399532049477 0.6416658287194734 0.07170494559036925 469.25192889048475 800316.6249610248 0.026770235719794856 0.02371707202210876 5.29721849233082e-07 6.275952113517746 -0.20069529113645224 DCSYGAVTS(ph)PTSTLESR ddPTM_KYSE-520_SHP099_60min_R1 1 DCSYGAVTSPTSTLESR 17 0 Q9HCD6;Q9HCD6-2;J3KRP9;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 DCSYGAVT(0.202)S(0.757)PT(0.033)S(0.007)T(0.001)LESR 81.656 0.0057112 301840000.0 365570.0 447800.0 353350.0 267410.0 248150.0 441570.0 319270.0 446670.0 516490.0 490870.0 True False 345291.1033542723 426287.01583849697 376127.5063799894 292824.5660002518 267677.99321963865 438813.99783792504 351544.9273749273 445120.60602356197 422708.43565335684 486521.27369108156 0.7097142962211271 0.8761939896366576 0.7730957035576884 0.6018741252128305 0.5501876437773239 0.9019420559121358 0.7225684597671715 0.9149047124837401 0.8688385452220885 1.0 18.892143364289254 -7.459381442087111 0.9987332735061624 0.9799029614806942 0.722903387021533 0.43097733589502174 0.10398341423901164 0.5501618348403117 1.0034816764009054 0.1013748561739765 0.03792374555236134 3.472310534456254e-08 7.459381442087111 -0.2569995744591612 DDAMLLK ddPTM_KYSE-520_SHP099_60min_R1 4 DDAMLLK 7 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ;;; 123.96 0.017712000000000002 1904780000.0 2904410.0 4378580.0 2693860.0 2482000.0 4564790.0 4895730.0 3402230.0 3868730.0 3822140.0 4392170.0 False True 2743296.587502209 4168226.4444174296 2867510.525928394 2717888.5337594897 4924013.002897744 4865173.933091167 3746160.6109650037 3855310.2785983747 3128135.724308543 4353258.790856558 0.6301708029084186 0.9574956704095414 0.6587043554477439 0.6243342434564317 1.1311096443978887 1.1175935470020342 0.8605416748559301 0.8856147690314075 0.7185733434637005 1.0 22.05366435678001 -5.7491404386996505 24.99958582730693 0.9502024666318689 0.7305939539589028 0.3880800648679277 0.14391603043837267 276.3359987843644 561695.0933702725 0.04524743619461655 0.0579829745593186 1.7818024891421358e-06 5.7491404386996505 -0.2196085126729661 DDAT(ph)PVRDEPMDAESITFK ddPTM_KYSE-520_SHP099_60min_R1 2 DDATPVRDEPMDAESITFK 19 1 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 DDAT(1)PVRDEPMDAESITFK;DDAT(1)PVRDEPMDAESITFK 167.51 2.5217e-08 950590000.0 1221240.0 1077720.0 979610.0 970470.0 1046940.0 1173390.0 1055970.0 1262640.0 1347490.0 1225600.0 True False 1153495.382718417 1025944.7135093 1042757.228031417 1062703.1770175556 1129328.221726248 1166066.4377630807 1162717.7528740626 1258260.1965423927 1102819.7834586164 1214742.1375023704 0.9495804476579015 0.8445781881072666 0.8584185860016584 0.8748384897576519 0.929685557832264 0.9599291913595985 0.9571724870471069 1.0358249357592055 0.9078632817711606 1.0 20.212218663871944 -6.060227592920235 1.9051173195470394 0.9761294655250372 0.8768970741967862 0.5284290771128288 0.040064178476986095 0.25402036360553065 1.8416830883272328 0.014751428724663094 0.015546050383908938 8.70507279263596e-07 6.060227592920235 -0.09923239132825101 DDDDIDLFGS(ph)DDEEESEEAKR ddPTM_KYSE-520_SHP099_60min_R1 12 DDDDIDLFGSDDEEESEEAKR 21 1 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 DDDDIDLFGS(1)DDEEESEEAKR;DDDDIDLFGS(1)DDEEESEEAKR;DDDDIDLFGS(1)DDEEESEEAKR;DDDDIDLFGS(1)DDEEESEEAKR;DDDDIDLFGS(1)DDEEESEEAKR;DDDDIDLFGS(1)DDEEESEEAKR;DDDDIDLFGS(1)DDEEESEEAKR;DDDDIDLFGS(1)DDEEESEEAKR;DDDDIDLFGS(1)DDEEESEEAKR;DDDDIDLFGS(1)DDEEESEEAKR;DDDDIDLFGS(1)DDEEESEEAKR;DDDDIDLFGS(1)DDEEESEEAKR 298.32 1.348e-44 18331590000.0 10120787.0 9378134.0 8118664.0 10639003.0 10096521.0 8828898.0 9763880.0 10775749.0 10864504.0 9735583.0 True False 9559366.769821296 8927594.36577389 8642006.071761692 11650130.646387117 10891059.761353781 8773793.57266858 10750908.276685877 10738370.441797733 8891783.945458066 9649333.308788963 0.9906763984527592 0.9252032321903849 0.8956065455724531 1.2073508369511659 1.1286852068249948 0.9092642249881752 1.1141607334564305 1.1128613861868402 0.9214920514103401 1.0 23.201997836541096 -5.2166958197052935 24.99976709020929 1.0602674523106963 0.9359661451696412 0.26470701209284286 0.09078318112315502 602.3137566661322 336532.53654742875 0.024870764767210063 0.043077038077717976 6.071614371833881e-06 5.2166958197052935 -0.12430130714105514 DDDDSIADFLNS(ph)DEEEDRVSLQNLK ddPTM_KYSE-520_SHP099_60min_R1 1 DDDDSIADFLNSDEEEDRVSLQNLK 25 1 Q15649-2;Q15649 Q15649-2 ZNHIT3 Zinc finger HIT domain-containing protein 3 1 DDDDSIADFLNS(1)DEEEDRVSLQNLK 194.25 1.7745000000000001e-15 80014000.0 72858.0 72351.0 65713.0 76228.0 74170.0 65346.0 67789.0 77804.0 88614.0 66417.0 True False 68816.42150117784 68875.14935893501 69948.96512451756 83472.68620121614 80006.75703042753 64938.15137513205 74641.77367688454 77534.11608359002 72523.93137715453 65828.59705164404 1.0453879405509703 1.046280073459577 1.0625923725769364 1.2680307638294328 1.2153799505655634 0.9864732697278447 1.1338806691919372 1.1778181452471597 1.1017085981683286 1.0 16.006426830713053 -5.027768588633668 24.900987407812252 1.1343865152428136 1.0479844903139925 0.14530535380866283 0.08205049735465678 1148.444947883592 1029848.1361295878 0.02273685220225506 0.039512932664701246 9.380617146771383e-06 5.027768588633668 -0.0864020249288211 DDDHGILDQFSR ddPTM_KYSE-520_SHP099_60min_R1 3 DDDHGILDQFSR 12 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 0 ;; 172.76 3.0374e-06 1211330000.0 866950.0 892840.0 557630.0 578170.0 937760.0 916420.0 678610.0 758460.0 802810.0 798730.0 False True 818858.555278022 849946.6262198369 593575.7220395455 633119.1029668512 1011556.376875473 910700.2828512623 747210.5213953679 755829.0792858953 657039.9411931915 791653.8736025372 1.034364363748624 1.0736341405771566 0.7497919758017377 0.799742316785175 1.2777760718484672 1.150376841721227 0.9438601215895992 0.9547468969568532 0.829958600724373 1.0 19.594510268396956 -6.977767975684853 24.941976055970727 0.9252722305703934 1.0105099391009575 0.06783848040508733 0.14949319886672605 767.7125673500846 861290.1497005257 0.06928027706097213 0.046705488648325966 1.0525240406383356e-07 6.977767975684853 0.08523770853056412 DDDHNGHIDFITAASNLR ddPTM_KYSE-520_SHP099_60min_R1 2 DDDHNGHIDFITAASNLR 18 0 A0AVT1;A0AVT1-2;H0Y9U5 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 0 ; 130.27 2.7677e-05 538490000.0 267050.0 281060.0 197135.0 199475.0 269050.0 284020.0 221147.0 262800.0 223418.0 275810.0 False True 252236.20414902325 267557.455720339 209842.6375271525 218433.04402565447 290222.70431490504 282247.32582813007 243502.6969467314 261888.40813798123 182850.92310945323 273366.5379769331 0.9227032906650307 0.9787498415146763 0.7676237153241454 0.7990482143212642 1.0616614105834499 1.0324867407581038 0.8907553160997281 0.9580119427787448 0.6688855353791777 1.0 18.06047713197753 -11.591009160337258 2.304392511371518 3.2148157626766105 0.9037681001268355 0.0629195407069465 0.11630248891097458 13515812.13459332 3329067.766343596 167895004.11421636 0.029828640958369224 2.5644299458214266e-12 11.591009160337258 -2.311047662549775 DDDKHVMR ddPTM_KYSE-520_SHP099_60min_R1 1 DDDKHVMR 8 1 Q96CT7;M0R2F5 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 0 122.13 0.00091183 726130000.0 1132300.0 1228800.0 798510.0 866480.0 1211900.0 1259300.0 926010.0 1218300.0 1111800.0 1042400.0 False True 1069489.0618159117 1169766.6035335972 849983.2322611721 948829.9986832881 1307269.635232238 1251440.241586382 1019620.1277866876 1214074.0016533562 909925.1461972186 1033165.1469749273 1.0351578979869187 1.1322164776450643 0.8226983215121942 0.9183720545175477 1.26530558939186 1.21126834877324 0.9868897830826958 1.1751015848803301 0.8807160683473002 1.0 19.97863945051512 -5.706170779350229 24.999991874243232 1.096558880928782 0.977160649553629 0.1416941755554847 0.13056139846283327 173.7374799931693 78586.48598200482 0.03948129624653726 0.050970103555302265 1.9671126020671997e-06 5.706170779350229 -0.11939823137515304 DDDKNNDGYIDYAEFAK ddPTM_KYSE-520_SHP099_60min_R1 6 DDDKNNDGYIDYAEFAK 17 1 Q8NI22-2;Q8NI22-3;Q8NI22 Q8NI22-2 MCFD2 Multiple coagulation factor deficiency protein 2 0 ;;;;; 231.77 1.6750999999999996e-19 5367260000.0 5192420.0 5789640.0 3432340.0 3311420.0 5396910.0 6028900.0 4695980.0 4396620.0 4761540.0 4667650.0 False True 4904386.111767351 5511497.003973184 3653594.1283381777 3626136.3611852704 5821616.112782584 5991271.398793102 5170695.486748237 4381369.151398822 3896964.36465543 4626298.252376752 1.0601102315977426 1.191340614743475 0.7897446141655806 0.7838094656613092 1.2583745783773754 1.2950465084509193 1.1176744785297408 0.9470572177545842 0.8423504391774508 1.0 22.14142684726423 -7.388053472240487 5.293996267964635 0.9137623902706236 1.0690460597207576 0.13159046512853623 0.16626564664356747 0.5221278851454536 20.13638923910121 0.10603820749572215 0.04903763160626241 4.092102728654435e-08 7.388053472240487 0.15528366945013405 DDDLVEFS(ph)DLES(ph)EDDERPR ddPTM_KYSE-520_SHP099_60min_R1 1 DDDLVEFSDLESEDDERPR 19 1 H0YJG4;Q9HCK8-2;Q9HCK8;A0A2R8Y840 H0YJG4 CHD8 Chromodomain-helicase-DNA-binding protein 8 2 DDDLVEFS(1)DLES(1)EDDERPR 80.683 0.0042621000000000004 0.0 93371.0 81505.0 81298.0 90501.0 109460.0 102420.0 99138.0 109550.0 113890.0 108600.0 True False 88191.52449952599 77589.37745850079 86538.59916139924 99102.18782988217 118073.87925779416 101780.75878922995 109159.83653364085 109169.99661916221 93210.44693326259 107637.88848952141 0.8193353264088924 0.7208370449040734 0.8039789740935303 0.9206998504019317 1.096954621785327 0.9455848699516095 1.0141395196940117 1.0142339110432286 0.8659631681862345 1.0 16.71582646975135 -5.323735203843873 3.1219684732053867 0.9901482927636477 0.7704425764440764 0.7033601677741026 0.060229658800051405 0.13043776876313265 2.5126549300944543 0.017094449080718888 0.028130436588270295 4.74531226204025e-06 5.323735203843873 -0.21970571631957125 DDDRTPGLHGDCDDDKYR ddPTM_KYSE-520_SHP099_60min_R1 2 DDDRTPGLHGDCDDDKYR 18 2 O95159 O95159 ZFPL1 Zinc finger protein-like 1 0 ; 150.29 2.193e-06 692510000.0 407900.0 573360.0 369910.0 452180.0 489710.0 506020.0 403450.0 553800.0 584560.0 363700.0 False True 385272.9738715096 545814.9249690943 393754.99047692685 495155.05124712584 528247.3909312478 502861.7414814119 444234.6632925556 551878.9970578911 478418.63955841516 360477.9009543182 1.0687838917491188 1.5141425411214406 1.092313812953615 1.373607230668697 1.4654085299897215 1.3949863227403154 1.232349228944416 1.5309648541474068 1.3271788320223357 1.0 18.459551292402605 -4.233464373030875 23.624085284329553 1.3400776169405615 1.0687830605949467 0.1727690740708394 0.16595031183392583 7635.892390530312 6448077.787369844 0.038606936208381216 3.218874373696556 5.841651266040638e-05 4.233464373030875 -0.27129455634561483 DDDVPLMWR ddPTM_KYSE-520_SHP099_60min_R1 1 DDDVPLMWR 9 0 O43252 O43252 PAPSS1 Bifunctional 3-phosphoadenosine 5-phosphosulfate synthase 1;Sulfate adenylyltransferase;Adenylyl-sulfate kinase 0 105.57 0.01146 0.0 67856.0 71922.0 55412.0 45572.0 71788.0 84168.0 54130.0 66128.0 63774.0 60033.0 False True 64091.8924124176 68466.75916287702 58983.94618233478 49903.14917827859 77437.30718215353 83642.6762914656 59601.98865789076 65898.61740239123 52194.249211712035 59501.15432496724 1.0771537651585366 1.1506795110048433 0.9913075948105525 0.8386921185718705 1.301442099076389 1.4057319936122374 1.0016946617938336 1.107518301955691 0.8771972544709244 1.0 15.86063003658771 -7.747203775338192 23.996668275413366 0.9385986865261385 1.1104069883476326 0.16617905793773624 0.15291159106179944 244.5852844449809 412299.83277385257 0.11243008091465474 0.041993330078271975 1.7897658808395224e-08 7.747203775338192 0.1718083018214941 DDDWGNIK ddPTM_KYSE-520_SHP099_60min_R1 2 DDDWGNIK 8 0 P54578-2;P54578 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14 0 ; 134.81 0.0055618 1011420000.0 1659980.0 1758390.0 1304680.0 1064650.0 1742450.0 1896060.0 1502960.0 1733000.0 1620660.0 1790310.0 False True 1567897.6003119114 1673914.305002799 1388781.7603618077 1165834.015901305 1879570.901815673 1884225.986232256 1654893.864276069 1726988.627485239 1326388.9975139282 1774449.2462401045 0.8835967574920178 0.9433430167414876 0.7826551045652667 0.657011756392357 1.059241849716644 1.0618652464840899 0.9326239495339963 0.973253324176259 0.7474933421310443 1.0 20.758939879567006 -5.7808312787425455 24.999817242150225 0.9645587579461129 0.823272614162998 0.3058810087616458 0.10735492939998431 334.29283530652816 430964.5820619055 0.035273078083264874 0.04005346429696545 1.6564133468756024e-06 5.7808312787425455 -0.14128614378311488 DDDYRGGGDRYEDRYDR ddPTM_KYSE-520_SHP099_60min_R1 1 DDDYRGGGDRYEDRYDR 17 3 E7EX17;P23588-2;P23588;F8VX11;F8VP89 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 105.9 0.00023046 676750000.0 643900.0 1135000.0 1023700.0 548810.0 493250.0 507840.0 334000.0 410140.0 1200100.0 323090.0 False True 608181.5834171728 1080472.8963302674 1089689.3399779124 600968.7373942569 532065.9687914039 504670.38218631677 367763.9795258733 408717.3200673952 982192.0920590785 320227.67396021617 1.8992161917046897 3.3740772087814657 3.402858118106592 1.8766920733681465 1.6615240095005208 1.5759736688123183 1.1484453388359024 1.2763335379882648 3.0671680555038545 1.0 18.28873846486425 -5.394328953443181 5.037997014210134 1.6225127816526688 2.9327135924678585 0.428278561101359 0.6572416584902043 0.2070969823272764 7.595400224336581 0.18604591578570667 0.27898763771642343 4.033397702318803e-06 5.394328953443181 1.3102008108151897 DDEENYLDLFSHK ddPTM_KYSE-520_SHP099_60min_R1 3 DDEENYLDLFSHK 13 0 Q07666;Q07666-3;Q07666-2 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 0 ;; 206.2 3.6806e-09 321690000.0 602436.0 585592.0 441599.0 400607.0 601988.0 623005.0 476600.0 526716.0 562531.0 608195.0 False True 569017.6741536079 557459.2813284886 470065.1781233818 438680.56883311406 649361.0307568164 619116.5947030293 524779.3791677577 524888.9451324386 460389.5506525162 602806.8654685501 0.9439469036427139 0.9247726150152359 0.7797940021104591 0.7277298815967136 1.0772289898391927 1.0270563096885135 0.870559725227842 0.870741484877503 0.7637430444569743 1.0 19.201336322562042 -4.53943497569447 24.897290848262664 0.887614786256549 0.9391534898875921 0.026777842442613498 0.11007233703229535 920.5808094182963 1384369.2097667144 0.030017868820713323 0.07946281034103729 2.8877861177012088e-05 4.53943497569447 0.05153870363104307 DDEFTHLYTLIVRPDNTYEVK ddPTM_KYSE-520_SHP099_60min_R1 4 DDEFTHLYTLIVRPDNTYEVK 21 1 P27797;K7EJB9 P27797 CALR Calreticulin 0 ;;; 291.62 3.8503999999999994e-44 1205935000.0 1073580.0 888780.0 525717.0 720978.0 1103380.0 1071600.0 828510.0 852900.0 771286.0 643016.0 False True 1014026.3772713284 846081.6747140215 559605.5589969408 789499.5323500611 1190209.7286265749 1064911.746910162 912263.8762783874 849941.4889683565 631239.9049378202 637319.3784988773 1.5910804087892876 1.3275630763132553 0.8780614208138764 1.2387816203072695 1.8675247745172268 1.670923218149153 1.4314077165315544 1.3336194028342319 0.9904608681829563 1.0 19.281657002814654 -7.700670354822476 3.6018221313052057 0.9829288503145192 1.420988384036055 0.3169001746833544 0.2507298231195712 0.3202674934524847 7.877388125043117 0.2400421400703029 0.07366200762627446 1.992184905452701e-08 7.700670354822476 0.43805953372153594 DDEKEAEEGEDDRDS(ph)ANGEDDS ddPTM_KYSE-520_SHP099_60min_R1 14 DDEKEAEEGEDDRDSANGEDDS 22 2 P07910;G3V2Q1;P07910-3;P07910-2;G3V2D6;G3V4C1;P07910-4 P07910;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 DDEKEAEEGEDDRDS(0.912)ANGEDDS(0.088);DDEKEAEEGEDDRDS(0.804)ANGEDDS(0.196);DDEKEAEEGEDDRDS(0.999)ANGEDDS(0.001);DDEKEAEEGEDDRDS(0.92)ANGEDDS(0.08);DDEKEAEEGEDDRDS(1)ANGEDDS;DDEKEAEEGEDDRDS(0.987)ANGEDDS(0.013);DDEKEAEEGEDDRDS(1)ANGEDDS;DDEKEAEEGEDDRDS(0.994)ANGEDDS(0.006);DDEKEAEEGEDDRDS(1)ANGEDDS;DDEKEAEEGEDDRDS(1)ANGEDDS;DDEKEAEEGEDDRDS(1)ANGEDDS;DDEKEAEEGEDDRDS(1)ANGEDDS;DDEKEAEEGEDDRDS(0.992)ANGEDDS(0.008);DDEKEAEEGEDDRDS(1)ANGEDDS 264.29 4.2044e-36 39495440000.0 16583373.0 13079739.0 11568755.0 13379673.0 13224610.0 13389703.0 14186239.0 15321158.0 15594551.0 12928473.0 True False 15663460.24155553 12451368.705351487 12314495.45796247 14651273.099174617 14265311.569261983 13306132.896918861 15620322.482470497 15268012.478883158 12762973.64503957 12813936.78741979 1.2223768933317423 0.9717051763183148 0.9610235841066695 1.1433857792679802 1.1132653302353648 1.038410998716826 1.2190104213566828 1.1915161384183417 0.9960228348847284 1.0 23.61121044286826 -5.295083541843187 24.987627168856843 1.111126557559584 1.043702125513288 0.04006584231389454 0.09694130164577677 1531.6973691023804 1137593.883994331 0.027185345111712923 0.04032449579080906 5.068931918048219e-06 5.295083541843187 -0.067424432046296 DDEYDYLFK ddPTM_KYSE-520_SHP099_60min_R1 5 DDEYDYLFK 9 0 B4DQU5;H3BMH2;H3BSC1;P62491-2;Q15907-2;P62491;Q15907 B4DQU5 RAB11A;RAB11B Ras-related protein Rab-11A;Ras-related protein Rab-11B 0 ;;;; 177.32 0.00031660000000000005 912120000.0 1331050.0 1669590.0 1222810.0 1270380.0 1600770.0 1731560.0 1533680.0 1585360.0 1593260.0 1525910.0 False True 1257214.003117609 1589380.390294319 1301634.2891651755 1391116.5332463242 1726741.4918646032 1720752.6917504328 1688719.3416743774 1579860.7561858068 1303964.1468161372 1512391.6245400177 0.831275433371949 1.0509053108368787 0.8606463220536926 0.9198123757591038 1.1417290758865306 1.1377692548871305 1.11658866279955 1.0446108868569735 0.8621868341890137 1.0 20.528400334296183 -5.738368187466856 24.597019714295573 1.0603811373923675 0.9213906136030313 0.3289394686109044 0.09355663039569871 237.08843219459482 252766.84446780538 0.028379602880913908 0.03661149572104007 1.8265510406823495e-06 5.738368187466856 -0.13899052378933618 DDFTEFGK ddPTM_KYSE-520_SHP099_60min_R1 2 DDFTEFGK 8 0 O75822-3;O75822;H0YGJ7;H0YLP3 O75822-3 EIF3J Eukaryotic translation initiation factor 3 subunit J 0 ; 110.81 0.008159699999999999 608470000.0 691240.0 884470.0 628940.0 509030.0 804880.0 829410.0 639140.0 709910.0 761060.0 828240.0 False True 652895.5392472224 841978.7335834645 669482.4787395807 557408.0581545504 868219.4768592496 824233.3445359828 703750.508605289 707447.4879042405 622870.6887613388 820902.437960969 0.7953387748109785 1.0256745438286754 0.8155445126981243 0.6790186414101661 1.0576402708899377 1.0040576156446646 0.8572888519533789 0.8617924069776938 0.7587633559823269 1.0 19.646851246216297 -3.9876353671142564 17.545851960445123 0.8904618175523451 0.6386028717327875 0.05887569331952636 0.1186260596603185 21562728.498690367 536957048.9214251 0.030216208701001498 134152324.27978837 0.00010288797812471332 3.9876353671142564 -0.2518589458195576 DDGLFSGDPNWFPK ddPTM_KYSE-520_SHP099_60min_R1 8 DDGLFSGDPNWFPK 14 0 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 ;;;;;;; 215.5 5.9723e-13 2671208000.0 2666050.0 3635190.0 2866010.0 1993460.0 3691050.0 4008930.0 3125330.0 3034110.0 3239770.0 3536290.0 False True 2518158.891861084 3460550.015868566 3050757.5903781336 2182917.839044395 3981514.6357982927 3983908.780832922 3441268.856681432 3023585.3805765943 2651509.435955539 3504961.221791991 0.7184555641313538 0.9873290449984725 0.8704112249260106 0.6228079858550699 1.1359653884451975 1.1366484616329244 0.9818279401453707 0.862658725516717 0.7565017893692685 1.0 21.74096705195155 -5.770094824271896 24.99989567230482 0.9800970658238715 0.8181965386602476 0.28227193894794145 0.1387250036611795 302.2528072599957 873007.5059157896 0.04637353020649685 0.053390913541141984 1.6978728967980205e-06 5.770094824271896 -0.1619005271636239 DDGLFSGDPNWFPKK ddPTM_KYSE-520_SHP099_60min_R1 4 DDGLFSGDPNWFPKK 15 1 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 ;;; 214.45 9.7458e-14 7490341000.0 19957510.0 19905510.0 14973180.0 10357410.0 18021450.0 17559070.0 12340190.0 11018650.0 14781720.0 14799970.0 False True 18850427.135990165 18949219.42082037 15938375.14073507 11341775.132331146 19439635.586975865 17449477.33092368 13587656.833848473 10980428.874922236 12097732.264837533 14668853.780002441 1.2850647650253575 1.291799598319891 1.0865453688319755 0.7731875511495663 1.3252320786970602 1.1895597019797124 0.9262930176843177 0.7485539797179988 0.8247223979647249 1.0 23.806252807853223 -6.880612425977347 4.368654094359928 0.8396846662832927 1.1509036646593904 0.4355375168051331 0.15868337013048317 0.21640239509455422 7.192041428755763 0.07347379316273048 0.04855078414983329 1.3163990918768187e-07 6.880612425977347 0.3112189983760977 DDGQHMWRPK ddPTM_KYSE-520_SHP099_60min_R1 1 DDGQHMWRPK 10 1 G3V4E1;P23743-3;P23743 G3V4E1 DGKA Diacylglycerol kinase;Diacylglycerol kinase alpha 0 129.89 0.00036103 669470000.0 796100.0 696890.0 483590.0 514330.0 769280.0 778580.0 502650.0 634320.0 621180.0 513600.0 False True 751938.7460139953 663410.3583467847 514762.98517135694 563211.7685610465 829817.9593955404 773720.5934204127 553462.7673912583 632119.691971401 508389.37067349255 509049.9035747536 1.4771415154655336 1.3032324604877632 1.0112230285409816 1.1063979476392125 1.6301308645149015 1.5199307336805976 1.0872465813363672 1.241763700439587 0.9987024201426569 1.0 18.95744756906929 -7.5148571020447115 1.5017634844004337 0.9954821093707882 1.3148251604796901 0.2966035576776216 0.1875528201448687 0.6032639887364153 2.4166358902078704 0.184619425143095 0.06110194302575454 3.0559264536594916e-08 7.5148571020447115 0.31934305110890193 DDGSSMSFYVRPS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 9 DDGSSMSFYVRPSPAK 16 1 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 DDGS(0.005)S(0.005)MS(0.005)FY(0.024)VRPS(0.96)PAK;DDGSSMSFYVRPS(1)PAK;DDGSSMSFYVRPS(1)PAK;DDGSSMSFYVRPS(1)PAK;DDGSSMSFYVRPS(1)PAK;DDGSSMSFYVRPS(1)PAK;DDGSSMSFYVRPS(1)PAK;DDGSSMSFYVRPS(1)PAK;DDGSSMSFYVRPS(1)PAK 251.26 2.2827e-23 11362130000.0 8934460.0 8403020.0 7327120.0 7530860.0 7482950.0 7567090.0 7701870.0 8257950.0 9991570.0 7789820.0 True False 8438847.693395546 7999326.306009843 7799437.879006517 8246590.670164374 8071815.59283859 7519860.984440481 8480450.182607606 8229305.098870018 8177352.754982689 7720808.25518826 1.0930005531123992 1.0360736909421915 1.0101841181932498 1.068099400684222 1.045462511961032 0.9739732856838214 1.0983889124443518 1.0658605714421228 1.059131697706343 1.0 22.88032045369768 DDGSSMSFYVRPS(ph)PAKR ddPTM_KYSE-520_SHP099_60min_R1 1 DDGSSMSFYVRPSPAKR 17 2 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 DDGSS(0.001)MS(0.001)FYVRPS(0.998)PAKR 71.735 0.012471 776890000.0 438270.0 490080.0 379870.0 391740.0 396080.0 325380.0 378980.0 397410.0 595400.0 369780.0 True False 413958.2894304152 466535.82117492263 404357.0280134901 428970.85181907425 427249.2426130744 323349.1827264175 417290.99688836996 396031.4774661913 487290.3688125778 366504.0368844867 1.1294781169378634 1.272935013597036 1.103281239275773 1.1704396368061714 1.1657422555150005 0.8822527180739607 1.1385713522710532 1.0805651169157817 1.3295634420696985 1.0 18.48346956354939 -6.046114910397861 24.997070212347413 1.0866660966969317 1.1713004885235572 0.1166818530345286 0.11301875348012468 972.2619303057808 527022.4886330678 0.03712741075956684 0.037128683778844485 8.99259614076602e-07 6.046114910397861 0.08463439182662547 DDGVFVQEVTQNS(ph)PAAR ddPTM_KYSE-520_SHP099_60min_R1 7 DDGVFVQEVTQNSPAAR 17 0 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2;E9PQE3 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR;DDGVFVQEVTQNS(1)PAAR 348.99 3.1638999999999997e-59 4969280000.0 3886840.0 4019150.0 3803870.0 3403900.0 3576140.0 3704930.0 3469150.0 3722600.0 4831060.0 4119980.0 True False 3671229.23697656 3826064.001132856 4049073.54660719 3727405.6325801513 3857561.872546759 3681806.1575959967 3819845.537641265 3709687.169461373 3953861.2851120112 4083480.1824959354 0.8990442154497256 0.9369615695781975 0.991574188106451 0.9128012053438835 0.9446750566054936 0.9016343885733212 0.9354387353256286 0.9084621459320784 0.9682577381079153 1.0 21.961367795513947 -7.983564335741902 5.160887452174427 0.999895658266014 0.9306617131760463 0.4466873866828094 0.025761126832683747 0.13690310495290556 11.094792611067424 0.02490250681220833 0.006486668949801999 1.0385697388420524e-08 7.983564335741902 -0.06923394508996772 DDGYSTKDS(ph)YSSR ddPTM_KYSE-520_SHP099_60min_R1 1 DDGYSTKDSYSSR 13 1 P38159;P38159-2;H3BT71;H3BUY5;H0Y6E7;Q96E39 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DDGYS(0.079)T(0.079)KDS(0.796)YS(0.023)S(0.023)R 76.58800000000001 0.031708999999999994 0.0 137840.0 116520.0 115940.0 135400.0 116220.0 117080.0 107390.0 109940.0 152600.0 114250.0 True False 130193.74042277229 110922.2042999142 123413.6779105589 148268.37529050562 125365.85279865567 116349.260291379 118246.02922539992 109558.643800189 124891.68673295158 113237.83388515488 1.149737114848152 0.9795507428410439 1.0898625810497602 1.309353686868282 1.1071021804055432 1.027476915616204 1.0442272266115964 0.9675091799380648 1.102914833743782 1.0 16.78899653189242 -6.218187580164705 5.0859501092271975 1.0271260689201305 1.1279898597494489 0.26724355295980584 0.08208627669098514 0.31604468827147 20.06539036831023 0.029583718805825103 0.02902280911960781 6.05079472808817e-07 6.218187580164705 0.1008637908293184 DDHLS(ph)LPDVTCENFISK ddPTM_KYSE-520_SHP099_60min_R1 3 DDHLSLPDVTCENFISK 17 0 Q8TD26 Q8TD26 CHD6 Chromodomain-helicase-DNA-binding protein 6 1 DDHLS(1)LPDVTCENFISK;DDHLS(1)LPDVTCENFISK;DDHLS(1)LPDVTCENFISK 175.85 1.0198e-08 255081000.0 329153.0 294849.0 317848.0 291620.0 296230.0 303048.0 286691.0 344005.0 363685.0 315203.0 True False 310894.2269397617 280684.01146262826 338336.9906547815 319335.47712124966 319541.6156818598 301156.565022052 315672.5241145278 342811.72694637073 297648.9717527754 312410.54664422356 0.995146387595587 0.8984460175164131 1.082988376317792 1.0221661225954457 1.0228259548668732 0.9639769471835797 1.010441316739601 1.0973116324935355 0.9527494348381946 1.0 18.253083632572547 -4.754693292940787 24.999747131427576 1.0205036194654313 0.946796222543381 0.26781757803751505 0.04774412468259011 195.11847093600628 723054.4635760686 0.01179767723745436 0.02972817483726659 1.759165531676928e-05 4.754693292940787 -0.0737073969220503 DDISEIQSLAS(ph)DHS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 2 DDISEIQSLASDHSGR 16 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 DDISEIQS(0.004)LAS(0.998)DHS(0.998)GR;DDISEIQS(0.001)LAS(0.999)DHS(1)GR 174.29 2.7412e-08 1046330000.0 1053440.0 963370.0 906380.0 1123230.0 1061290.0 1026820.0 1076360.0 1103790.0 1187860.0 938270.0 True False 995003.5832194231 917088.2591521504 964806.7050592762 1229981.4414885864 1144807.4850859165 1020411.2355004612 1185168.973061284 1099961.2101165217 972174.5675137886 929957.6577630151 1.0699450398772714 0.9861613069117343 1.0374738000223467 1.3226209077596816 1.2310318384169405 1.0972663400127587 1.2744332638887796 1.182807841770393 1.0453965934882723 1.0 19.826805504285456 -5.042318919535042 23.99567331281932 1.1771656140640199 1.0239942249486833 0.28319517451122855 0.09603596914204848 318.37098428262584 180522.46292731384 0.025494828256670612 0.044165015420725345 9.071541265376373e-06 5.042318919535042 -0.15317138911533656 DDISEIQSLAS(ph)DHSGR ddPTM_KYSE-520_SHP099_60min_R1 1 DDISEIQSLASDHSGR 16 0 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 DDISEIQS(0.046)LAS(0.922)DHS(0.033)GR 73.983 0.016002000000000002 32845000.0 20661.0 17562.0 18125.0 21523.0 18004.0 20184.0 17995.0 18880.0 27659.0 21298.0 True False 19514.893143317615 16718.295158900582 19293.36650102536 23568.539448874082 19420.81237125276 20058.024169125347 19814.11021427571 18814.509686625133 22636.822826649466 21109.316289593273 0.9244682715251324 0.7919865773740181 0.9139740120591607 1.116499422602957 0.920011434990297 0.9501977181048633 0.93864291682644 0.891289392252867 1.0723617248470165 1.0 14.365592231489513 -5.00168388647986 24.96339589576738 0.9768316434488818 0.85691561158224 0.3381738393109167 0.07117777513305107 71.69923790852775 1063003.533238668 0.018337506528915148 0.03730788645509347 9.961302150840464e-06 5.00168388647986 -0.11991603186664179 DDIVPWHTSMQVADR ddPTM_KYSE-520_SHP099_60min_R1 1 DDIVPWHTSMQVADR 15 0 Q9NUJ1-2;Q9NUJ1 Q9NUJ1-2 ABHD10 Mycophenolic acid acyl-glucuronide esterase, mitochondrial 0 57.803999999999995 0.054498000000000005 70076000.0 5082.2 4784.6 1532.8 2270.9 0.0 3084.8 5450.9 3248.2 3665.5 2197.5 False True 4800.280234885476 4554.740634168987 1631.6067405667134 2486.72565322902 0.0 3065.5466189515405 6001.930167657438 3236.9327523355787 2999.9375997354796 2178.0318596291295 2.203953176195897 2.091218553131981 0.7491197768082878 1.1417306143779062 0.0 1.40748474610171 2.7556668379862144 1.4861732798007632 1.3773616701117963 1.0 11.08880934220303 -8.97104097380333 18.00280973291447 0.9999993750703352 1.449103522698545 0.03478394089575443 0.7336093620038182 0.0 0.0 0.7701001034846836 0.18677670993920248 1.0689540232828818e-09 8.97104097380333 0.4491041476282097 DDKLTPK ddPTM_KYSE-520_SHP099_60min_R1 2 DDKLTPK 7 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 90.65700000000001 0.0080512 1485390000.0 1919830.0 1836250.0 1147770.0 1229540.0 1689370.0 1770330.0 1415830.0 1673810.0 1666790.0 1505300.0 False True 1813333.202813775 1748033.793732558 1221757.0906969314 1346395.1119253207 1822313.8077995589 1759280.7137994315 1558955.9135692134 1668003.9437801903 1364142.9523565955 1491964.2131056783 1.2153999317712412 1.1716325219985297 0.8188916865195561 0.9024312380272578 1.221419248392174 1.1791708529907068 1.0449016805329967 1.1179919257634652 0.9143268587635829 1.0 20.508781500229546 -6.920748685166416 0.010125651349020185 2.5097196830822175e-06 2.107504534201132 0.04937563701990477 0.13376430793788166 6880.160626087048 49.39144543532901 5075.465308286119 5196.878761966477 1.2001936228295112e-07 6.920748685166416 2.1075020244814486 DDNEDNS(ph)NDGTQPSKR ddPTM_KYSE-520_SHP099_60min_R1 2 DDNEDNSNDGTQPSKR 16 1 S5FZ81;Q8WUB8-2;Q8WUB8 S5FZ81 PHF10 PHD finger protein 10 1 DDNEDNS(1)NDGTQPSKR;DDNEDNS(1)NDGTQPSKR 183.56 3.3547e-12 505980000.0 285980.0 240480.0 220980.0 258620.0 239590.0 216230.0 262450.0 255560.0 268600.0 223850.0 True False 270116.11931300355 228926.97983216104 235224.72438050114 283199.16704306175 258444.36991937633 214880.4283635538 288981.0072651664 254673.5220081527 219829.01085498562 221866.8631526647 1.2174694114962943 1.031821411179543 1.0602066529360223 1.2764374229611513 1.164862414544271 0.9685106883928692 1.302497376844964 1.1478664203807398 0.9908149767445135 1.0 17.759334684850533 -7.7613212908831235 24.99994819275512 0.9954074254998958 1.1437783874335217 0.2685774987905406 0.09947929600492461 4.231047465334847 897434.4301027957 0.07834547581061652 0.02526523631368607 1.7325218045950682e-08 7.7613212908831235 0.14837096193362587 DDPDGKQEAKPQQAAGMLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 19 DDPDGKQEAKPQQAAGMLSPK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK;DDPDGKQEAKPQQAAGMLS(1)PK 248.92 6.381800000000002e-27 102455710000.0 48061690.0 44376720.0 43841250.0 39489150.0 43259380.0 40076430.0 37124190.0 38061430.0 51894500.0 42511240.0 True False 45395612.24709632 42244795.76038524 46667327.123480126 43242186.94315414 46663647.09379717 39826298.13477307 40877065.422379166 37929403.7829345 42471766.953887045 42134623.48684421 1.0773945152558513 1.0026147681983066 1.1075766972986283 1.026286302443304 1.1074893574963844 0.9452154745659024 0.9701538079518452 0.9001956264015812 1.0080015777795688 1.0 25.32850289759471 -6.2729872023484 24.947200871544492 0.9588155505697796 1.0611423719845146 0.5898740579174989 0.04132068329501941 481.0880325317807 1039309.3871221277 0.013577464000942164 0.012066790964732881 5.333506118621753e-07 6.2729872023484 0.10232682141473493 DDPS(ph)DVT(ph)DEDEGPAEPPPPPKLPLPAFR ddPTM_KYSE-520_SHP099_60min_R1 1 DDPSDVTDEDEGPAEPPPPPKLPLPAFR 28 1 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 2 DDPS(1)DVT(1)DEDEGPAEPPPPPKLPLPAFR 148.13 1.027e-06 81851000.0 43206.0 46181.0 32161.0 30445.0 39801.0 36252.0 31044.0 39003.0 48200.0 32640.0 True False 40809.27705097434 43962.395440905806 34234.14951941941 33338.483646376975 42933.11226328769 36025.73782100341 34182.23048024314 38867.70769636863 39448.09502312104 32350.83499353576 1.2614597755862784 1.3589261436278302 1.0582153297205457 1.0305293094610561 1.327109865073543 1.1135953006530421 1.0566104549410649 1.2014437248415706 1.2193841374110879 1.0 14.981515329031122 -1.0000000000281883 0.018514351568478034 4.787798540356362e-10 2.6296612297661075 0.21377783224798708 0.10806245540484527 6535.575405879095 9.352183198805179 503.7675187966932 870.8388251768783 0.09999999999350939 1.0000000000281883 2.629661229287328 DDREDKENAFK ddPTM_KYSE-520_SHP099_60min_R1 1 DDREDKENAFK 11 2 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 0 142.91 5.6248e-05 883780000.0 803140.0 945580.0 576880.0 530290.0 825660.0 933600.0 755370.0 968390.0 844100.0 870520.0 False True 758588.2231801025 900152.9174554843 614066.6078406355 580688.602162498 890634.7446372234 927773.0560986646 831730.1713007746 965030.881113925 690832.7180293866 862807.8700543117 0.8792087433467096 1.0432831557259923 0.711707239993049 0.6730219117333098 1.0322515307853648 1.0752950781965671 0.9639807426054414 1.1184771426032294 0.8006796669412627 1.0 19.718679810458294 -5.798150881545606 24.999336466135233 1.0064903780499634 0.8340464335838197 0.32017385605363735 0.12200881293781868 213.1169479590385 145124.59427471558 0.03911875681261567 0.04435770658004036 1.5916556617980125e-06 5.798150881545606 -0.17244394446614375 DDREQFYK ddPTM_KYSE-520_SHP099_60min_R1 2 DDREQFYK 8 1 P60604-2;P60604 P60604-2 UBE2G2 Ubiquitin-conjugating enzyme E2 G2 0 ; 138.98 0.00071273 732950000.0 1017040.0 1116320.0 676030.0 724310.0 1042790.0 964510.0 644590.0 801840.0 836150.0 839790.0 False True 960622.7637810243 1062690.3115695182 719607.975486244 793148.2046282586 1124851.6403365172 958490.135323181 709751.4477921644 799058.6041908632 684326.2376261959 832350.1139467336 1.154109007357569 1.2767347463083607 0.8645496209210531 0.9529021397827504 1.3514164550333712 1.151546830189441 0.8527078159775263 0.9600029972988015 0.8221615233298201 1.0 19.666830975648516 -6.757614161615469 24.999713926087235 0.9053849859924548 1.1226990818978952 0.36569326960481674 0.13963013227444276 117.23479593010778 766194.6614471823 0.05820420454248784 0.0433395883320202 1.7473738754036685e-07 6.757614161615469 0.21731409590544049 DDRGPPQRPK ddPTM_KYSE-520_SHP099_60min_R1 5 DDRGPPQRPK 10 2 E7EX17;P23588-2;P23588;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ;;;; 107.06 0.00070704 7550090000.0 7192010.0 6904050.0 5272330.0 4738970.0 6392600.0 6256720.0 4887730.0 5470630.0 6450290.0 4471270.0 False True 6793054.868383511 6572369.074809675 5612192.827826263 5189360.2839767095 6895661.251081447 6217669.489667557 5381829.448047891 5451653.661384639 5279079.934578572 4431658.02639542 1.5328472612108976 1.483049692838201 1.2663867099851691 1.17097489315925 1.556000307336479 1.403012022280254 1.214405402220377 1.2301611787087403 1.1912200587535904 1.0 22.079415127909286 -10.299169912337137 0.05702955345017046 7.901340191057336e-12 2.1012718588246724 0.5737256882670105 0.11222535911668147 144.8736689502863 1.43710545251854 37.42348294635847 17.77967552684099 5.02146092646938e-11 10.299169912337137 2.101271858816771 DDS(ph)HS(ph)AEDS(ph)EDEKEDHK ddPTM_KYSE-520_SHP099_60min_R1 6 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 DDS(1)HS(1)AEDS(1)EDEKEDHK;DDS(1)HS(1)AEDS(1)EDEKEDHK;DDS(1)HS(1)AEDS(1)EDEKEDHK;DDS(1)HS(1)AEDS(1)EDEKEDHK;DDS(1)HS(1)AEDS(1)EDEKEDHK;DDS(1)HS(1)AEDS(1)EDEKEDHK 170.11 1.8144000000000002e-07 12601500000.0 8959390.0 7252380.0 6243000.0 8108200.0 7536580.0 7784430.0 8616560.0 9263390.0 8529400.0 7708460.0 True False 8462394.77659882 6903964.77875568 6645433.769153177 8878800.890180783 8129665.968725619 7735844.48488231 9487605.974321736 9231257.462181473 6980675.96867652 7640169.041491131 1.1076187883595852 0.9036403175456748 0.8698019288662477 1.1621210004599465 1.0640688608558526 1.0125226867195736 1.241805766704612 1.2082530389117947 0.9136808270559026 1.0 22.865173128085594 -5.266348253468846 24.999173157567142 1.0972502872372494 0.9546823416168986 0.20881154864279572 0.11048112385111539 565.8877040931465 2881869.635582889 0.031086817609637503 0.04776286266808362 5.415664431795761e-06 5.266348253468846 -0.1425679456203508 DDS(ph)HS(ph)AEDS(ph)EDEKEDHKNVR ddPTM_KYSE-520_SHP099_60min_R1 4 DDSHSAEDSEDEKEDHKNVR 20 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 DDS(1)HS(1)AEDS(1)EDEKEDHKNVR;DDS(1)HS(1)AEDS(1)EDEKEDHKNVR;DDS(1)HS(1)AEDS(1)EDEKEDHKNVR;DDS(1)HS(1)AEDS(1)EDEKEDHKNVR 190.87 3.3385e-13 16084000000.0 7824850.0 7642890.0 6955920.0 6940070.0 6528580.0 6820310.0 6285250.0 6611680.0 9417140.0 5593050.0 True False 7390789.972048253 7275714.092188233 7404309.733065503 7599652.166191874 7042342.103461079 6777741.915424468 6920624.408128729 6588745.625257716 7707224.762780794 5543499.928327053 1.3332353328411939 1.3124766278086588 1.3356741821587819 1.370912287264219 1.2703783159579394 1.2226467038973863 1.2484214841899117 1.188553388733623 1.3903174641343816 1.0 22.402365689089663 -5.978919984635806 3.996497695961631 1.2253534552314536 1.3358148180995337 0.3003425219515141 0.09045417091159283 0.30204063357037003 10.898744402987358 0.027748527388801025 0.030528112682718763 1.0497358164569698e-06 5.978919984635806 0.11046136286808017 DDS(ph)HSAEDS(ph)EDEKEDHK ddPTM_KYSE-520_SHP099_60min_R1 1 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 DDS(0.765)HS(0.235)AEDS(1)EDEKEDHK 149.71 3.7962e-06 8619900000.0 5467200.0 4354000.0 4296900.0 4871100.0 4738400.0 4762200.0 5322400.0 5322300.0 5454200.0 4884900.0 True False 5163923.517407007 4144827.3045127564 4573885.049283081 5334047.879450385 5111285.122191968 4732477.3433516035 5860440.133618289 5303838.183534164 4463854.769193089 4841623.586394687 1.0665685642969036 0.8560821035654281 0.9447006706874175 1.1017064388151623 1.0556965098557123 0.9774566855321442 1.2104286979447452 1.095466859183009 0.9219747651876209 1.0 22.20705949022423 -5.247384033403887 23.42001585288593 1.059468273716857 0.9458135750931499 0.1936775038955314 0.08813899502980158 488.6226949032254 814173.0011787843 0.023798705579529827 0.04090669215226886 5.65738802168998e-06 5.247384033403887 -0.11365469862370714 DDS(ph)HSAEDS(ph)EDEKEDHKNVR ddPTM_KYSE-520_SHP099_60min_R1 1 DDSHSAEDSEDEKEDHKNVR 20 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 DDS(0.5)HS(0.5)AEDS(1)EDEKEDHKNVR 55.846000000000004 0.027998000000000002 8132500000.0 385640.0 373510.0 397470.0 393280.0 382340.0 381810.0 325020.0 392340.0 535120.0 288660.0 True False 364247.78044571914 355566.0189500605 423091.55217448506 430657.2129560563 412427.98278298014 379426.98216477205 357876.1934895187 390979.0641128442 437955.697277438 286102.6969740815 1.2731364796561737 1.2427915664921947 1.4788100799092208 1.5052539438139942 1.441538255825469 1.32619156050509 1.2508662004047424 1.3665689566997112 1.5307639596180147 1.0 18.126173571863003 -6.4172819032774395 7.390816204259023 1.313591738552462 1.3915048021001828 0.08708153055671652 0.14541147200504292 0.9023180740019671 55.80855386967798 0.052397389917479095 0.04607032699820897 3.8257633000219477e-07 6.4172819032774395 0.07791306354772076 DDS(ph)IISSLDVTDIAPSR ddPTM_KYSE-520_SHP099_60min_R1 2 DDSIISSLDVTDIAPSR 17 0 Q13426-3;Q13426-2;Q13426 Q13426-3 XRCC4 DNA repair protein XRCC4 1 DDS(1)IISSLDVTDIAPSR;DDS(1)IISSLDVTDIAPSR 261.17 1.8167e-29 149941000.0 133518.0 105373.0 80846.0 87111.0 98216.0 90618.0 92862.0 129006.0 117747.0 120389.0 True False 126111.4903784659 100310.72291190241 86057.46251817366 95390.00324912279 105945.04042740293 90052.41944895966 102249.39720578327 128558.5082962268 96367.11296032017 119322.4471212246 1.0568966143507268 0.84066934036303 0.721217713803207 0.79943049736662 0.8878885991985145 0.7546980607720162 0.8569166965030803 1.077404221903184 0.8076193145990113 1.0 16.864505944998747 -7.027445943086646 24.433050829795604 0.9589391935157736 0.8351343034654153 0.20160860097829336 0.10551377811697207 848.5051386985018 755356.3520526743 0.048836189294306685 0.02830042856243579 9.387588773213212e-08 7.027445943086646 -0.12380489005035833 DDS(ph)PVSHR ddPTM_KYSE-520_SHP099_60min_R1 3 DDSPVSHR 8 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 DDS(1)PVSHR;DDS(1)PVSHR;DDS(1)PVSHR 72.922 0.012955000000000001 1562990000.0 324200.0 268261.0 273022.0 311125.0 314346.0 298687.0 347964.0 291906.0 347487.0 325900.0 True False 306215.97972332296 255373.3388920295 290621.4349706456 340694.22645685816 339083.2418159202 296822.78364068276 383139.5969213799 290893.4462173724 284392.1202344247 323012.7795463635 0.9479995811725164 0.7905982520279035 0.8997211670039554 1.0547391559409083 1.0497517847192483 0.9189196293024017 1.1861437725759891 0.9005632737686129 0.8804361258827674 1.0 18.301231718685553 -5.096440935016078 5.560408529184297 1.0005889593765052 0.8636910559725011 0.26618029543984345 0.09134845418670952 0.2781719719171876 12.763239077096108 0.024993068532817155 0.04449146115036819 8.008645404009587e-06 5.096440935016078 -0.1368979034040041 DDSFFGETSHNYHK ddPTM_KYSE-520_SHP099_60min_R1 3 DDSFFGETSHNYHK 14 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;H0Y8T4 D6REM6 MATR3 Matrin-3 0 ;; 163.27 4.1441e-08 1415190000.0 1292650.0 1550490.0 936840.0 1923040.0 1552360.0 1465460.0 1464830.0 1423290.0 1135690.0 1318400.0 False True 1220944.1276661097 1476002.133067063 997230.2053969993 2105805.1434169435 1674521.900279825 1456313.5205552143 1612909.3117631306 1418352.9391883824 929477.3244151105 1306720.0016996795 0.9343578777993761 1.1295473637406594 0.7631552314955613 1.6115197905273329 1.2814695559123128 1.1144801630501984 1.2343189892748132 1.0854298834819238 0.711305653243326 1.0 20.317518609130207 -7.60351779201607 6.37977330589135 0.8603051609890481 1.1581090114660146 0.2226457670741141 0.21848846822945048 0.31999657305231183 20.040876438954566 0.15419687988037167 0.05669443325246968 2.4916222933003222e-08 7.60351779201607 0.29780385047696656 DDSHS(ph)AEDS(ph)EDEKEDHK ddPTM_KYSE-520_SHP099_60min_R1 15 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 DDS(0.032)HS(0.968)AEDS(1)EDEKEDHK;DDS(0.024)HS(0.976)AEDS(1)EDEKEDHK;DDS(0.003)HS(0.997)AEDS(1)EDEKEDHK;DDS(0.477)HS(0.524)AEDS(0.999)EDEKEDHK;DDS(0.001)HS(0.999)AEDS(1)EDEKEDHK;DDS(0.278)HS(0.736)AEDS(0.987)EDEKEDHK;DDS(0.087)HS(0.913)AEDS(1)EDEKEDHK;DDSHS(1)AEDS(1)EDEKEDHK;DDS(0.017)HS(0.983)AEDS(1)EDEKEDHK;DDSHS(1)AEDS(1)EDEKEDHK;DDSHS(1)AEDS(1)EDEKEDHK;DDS(0.01)HS(0.99)AEDS(1)EDEKEDHK;DDS(0.001)HS(0.999)AEDS(1)EDEKEDHK;DDS(0.017)HS(0.983)AEDS(1)EDEKEDHK;DDSHS(1)AEDS(1)EDEKEDHK 260.06 2.6806e-29 37995689000.0 26389814.0 21561662.0 19982100.0 21962226.0 22602741.0 23660644.0 24715761.0 24859767.0 26634999.0 22621748.0 True False 24925918.41063006 20525807.392805524 21270178.13849043 24049509.355855964 24381448.12469571 23512969.144325737 27214271.32446221 24773534.27059025 21798754.595284943 22421336.9121736 1.1117052702194847 0.915458675511053 0.9486578887694181 1.0726170990632746 1.0874216921230007 1.0486872052468663 1.2137666648096395 1.1049088806626661 0.9722325961503827 1.0 24.418368968182666 -5.333477219001153 6.782362610123423 1.0818619040036446 0.9845217706565959 0.17045830684100682 0.07750554834287066 0.3559537424642331 28.2579186723444 0.022039038472319663 0.03290559661342152 4.640051288201983e-06 5.333477219001153 -0.09734013334704872 DDSHS(ph)AEDS(ph)EDEKEDHKNVR ddPTM_KYSE-520_SHP099_60min_R1 15 DDSHSAEDSEDEKEDHKNVR 20 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 DDS(0.003)HS(0.997)AEDS(1)EDEKEDHKNVR;DDS(0.149)HS(0.854)AEDS(0.997)EDEKEDHKNVR;DDS(0.006)HS(0.994)AEDS(1)EDEKEDHKNVR;DDS(0.474)HS(0.526)AEDS(1)EDEKEDHKNVR;DDS(0.002)HS(0.998)AEDS(1)EDEKEDHKNVR;DDS(0.021)HS(0.979)AEDS(1)EDEKEDHKNVR;DDS(0.167)HS(0.834)AEDS(0.999)EDEKEDHKNVR;DDS(0.075)HS(0.925)AEDS(1)EDEKEDHKNVR;DDS(0.002)HS(0.998)AEDS(1)EDEKEDHKNVR;DDS(0.004)HS(0.996)AEDS(1)EDEKEDHKNVR;DDS(0.003)HS(0.997)AEDS(1)EDEKEDHKNVR;DDS(0.027)HS(0.973)AEDS(1)EDEKEDHKNVR;DDS(0.013)HS(0.987)AEDS(1)EDEKEDHKNVR;DDS(0.459)HS(0.541)AEDS(1)EDEKEDHKNVR;DDS(0.001)HS(0.999)AEDS(1)EDEKEDHKNVR 237.97 7.3785e-26 47405670000.0 11580001.0 11095903.0 10351860.0 9657737.0 9871089.0 9815685.0 9115248.0 9284987.0 13153120.0 7739405.0 True False 10937635.26037032 10562839.164590033 11019157.459161635 10575605.42077548 10647887.545486398 9754421.668971512 10036706.224087596 9252779.54722926 10764844.971172476 7670839.892865971 1.4258719270809617 1.3770120758762905 1.4364994724253943 1.378676333814632 1.3880993077940709 1.2716236820485998 1.30842337531017 1.2062276981995836 1.4033463247204507 1.0 22.870953118751753 -13.362108270242123 0.13835041161831868 7.995562201394008e-13 1.4889736561959672 0.7799813697261285 0.059494123932180495 49.4182314338556 0.4964676185829102 14.016244240848724 0.37847006559028223 4.344019136461354e-14 13.362108270242123 1.4889736561951676 DDSHSAEDS(ph)EDEKEDHK ddPTM_KYSE-520_SHP099_60min_R1 7 DDSHSAEDSEDEKEDHK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDSHSAEDS(0.999)EDEKEDHK;DDSHS(0.002)AEDS(0.998)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK;DDSHSAEDS(1)EDEKEDHK 346.7 2.7698e-59 10738350000.0 8206100.0 7099410.0 6082030.0 7304770.0 7265240.0 7522190.0 7470070.0 6691740.0 7900040.0 6244410.0 True False 7750891.274545221 6758343.687168336 6474087.385392071 7999013.144540821 7836973.054439041 7475241.221995296 8225217.576457618 6668527.915803863 6465591.879802018 6189089.385477463 1.2523476058905345 1.0919770690380741 1.0460484543305109 1.292437812145725 1.2662562400259227 1.2078095429572815 1.3289867158418938 1.0774651165083171 1.0446757959213453 1.0 22.561295727439358 -7.462190303085485 7.6386120908368484 1.034654707178139 1.2063556137709248 0.4810619556222334 0.08261332615299907 0.27072165748019655 30.816902544375413 0.04981357852809467 0.023514131989214163 3.449925342599898e-08 7.462190303085485 0.17170090659278592 DDSHSAEDS(ph)EDEKEDHKNVR ddPTM_KYSE-520_SHP099_60min_R1 10 DDSHSAEDSEDEKEDHKNVR 20 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR;DDSHSAEDS(1)EDEKEDHKNVR 308.0 1.2893999999999999e-53 24850419000.0 13147250.0 12263830.0 11938490.0 11110411.0 11588370.0 11858050.0 9906385.0 9480498.0 14998460.0 7749519.0 True False 12417945.834106894 11674657.198415864 12708064.167659381 12166341.120973127 12500308.790194085 11784039.511429677 10907819.072800664 9447612.365202863 12275117.744408287 7680864.2906945525 1.6167380862530492 1.5199666022689444 1.6545096602026068 1.5839807423381738 1.6274612227348346 1.5342074883039092 1.4201291234914282 1.2300194363085863 1.5981427714169771 1.0 22.87283722893493 -9.655053315655179 0.23448744236549127 0.6876125156349182 1.6635281418069694 0.724202408281601 0.10459264629107423 6.5705898486599414 0.42533906321000314 1.6656962659566896 0.21916634100700416 2.2128230382926992e-10 9.655053315655179 0.9759156261720512 DDSLDLS(ph)PQGRLS(ph)DVLKR ddPTM_KYSE-520_SHP099_60min_R1 1 DDSLDLSPQGRLSDVLKR 18 2 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 2 DDS(0.031)LDLS(0.969)PQGRLS(0.999)DVLKR 52.909 0.03871 40783000.0 45970.0 49790.0 41545.0 43637.0 46144.0 34976.0 36435.0 37547.0 52088.0 40819.0 True False 43419.95246107693 47398.013663686346 44223.05717435027 47784.24736005753 49775.27027655451 34757.70181031157 40118.20537133294 37416.758220535696 42630.132231625066 40457.37541670147 1.0732271190076372 1.171554337756662 1.0930777569939514 1.1811010197248586 1.2303138738952024 0.8591190469553549 0.9916166078032704 0.9248439335263811 1.053704838550319 1.0 15.304115110811782 -6.25714537810545 24.999690366645282 0.9627696134299094 1.149641969158415 0.6806639875694263 0.06299666856743884 213.32831697323746 1241999.9832507165 0.020691030149641233 0.019989566851282576 5.531649087789726e-07 6.25714537810545 0.18687235572850558 DDT(ph)SPPKDK ddPTM_KYSE-520_SHP099_60min_R1 3 DDTSPPKDK 9 1 Q5T5U3;E7ESW5;Q5T5U3-3;A0A1B0GV73;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 DDT(0.992)S(0.008)PPKDK;DDT(0.5)S(0.5)PPKDK;DDT(0.5)S(0.5)PPKDK 125.74 0.0021259 1399490000.0 3022790.0 2433890.0 2440250.0 2620140.0 2890270.0 2735510.0 2868380.0 2800530.0 3155880.0 2805060.0 True False 2855109.812917525 2316962.271056627 2597552.4195380476 2869157.3178261863 3117717.805613236 2718436.6674040887 3158343.843091093 2790815.6150786155 2582851.745260732 2780209.3507036595 1.0269405835193341 0.8333769075592143 0.9343010154543282 1.031993262341922 1.1213967771254905 0.9777812835267472 1.136009359256248 1.003814915726498 0.929013401313474 1.0 21.40676209178743 -5.242119054779207 5.35136056892414 1.0352175998384814 0.9203820123417815 0.26469195192969774 0.07306851640604548 0.210215770645207 19.568244023228814 0.01991143147031107 0.033530681332586486 5.7263902977687635e-06 5.242119054779207 -0.11483558749669986 DDTS(ph)PPKDK ddPTM_KYSE-520_SHP099_60min_R1 1 DDTSPPKDK 9 1 Q5T5U3;E7ESW5;Q5T5U3-3;A0A1B0GV73;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 DDT(0.013)S(0.987)PPKDK 174.23 9.4424e-05 828470000.0 786910.0 638700.0 587820.0 634680.0 715240.0 627800.0 672430.0 694080.0 762330.0 641030.0 True False 743258.5336338066 608015.8932917545 625711.8177452545 694999.7963764996 771525.3188410812 623881.6673294138 740405.7866843805 691672.39847949 623910.0887754333 635350.9729137941 1.1698392940599993 0.9569764102246076 0.9848286135073764 1.0938832645351104 1.2143293262033985 0.981948078977859 1.1653492608798453 1.0886461624626136 0.9819928124357918 1.0 19.27719424270184 -4.183746296334288 19.93595633380114 1.0604015021322366 1.1698626450257024 0.14672569614795683 0.08305769987322027 30375.86677527568 7788586.350873902 0.02103094493749513 111.47188824892844 6.550187074042653e-05 4.183746296334288 0.10946114289346576 DDWEEKR ddPTM_KYSE-520_SHP099_60min_R1 8 DDWEEKR 7 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 0 ;;;;;;; 172.14 0.0013478 22625220000.0 10164320.0 10158870.0 7052840.0 6026300.0 10170280.0 10063810.0 8084420.0 8951680.0 9097960.0 8830560.0 False True 9600484.907530427 9670822.636425247 7507477.351342986 6599037.740126838 10970623.17502248 10000998.028809225 8901672.069935815 8920628.711417817 7445999.804907768 8752328.108471727 1.0969064217596842 1.1049428810906292 0.8577691853298096 0.7539751319125441 1.2534520003201863 1.1426671743634542 1.017063341274824 1.0192292383078263 0.8507450489316651 1.0 23.061235392417192 -7.634971711689589 8.685441730813734 0.9259713523824344 1.0296036141569438 0.08593264560997316 0.13780510330447684 0.7218102072960129 51.81824439947195 0.10075770779432434 0.037767935437643244 2.3175456012630258e-08 7.634971711689589 0.10363226177450935 DDWLEWLR ddPTM_KYSE-520_SHP099_60min_R1 1 DDWLEWLR 8 0 P42345 P42345 MTOR Serine/threonine-protein kinase mTOR 0 96.711 0.024752 80855000.0 105250.0 90899.0 74248.0 68057.0 97569.0 95974.0 86945.0 85269.0 100610.0 89658.0 False True 99411.57268932663 86532.0755978193 79034.14488100026 74525.11681791689 105247.1252083293 95374.99066625234 95734.24910142824 84973.22174093426 82341.76017170558 88863.6998728685 1.1186972051754347 0.9737617916158691 0.8893861609866488 0.8386452164892426 1.1843657799405098 1.0732727852058728 1.0773155882366927 0.9562197147147812 0.9266073806234331 1.0 16.439306589287163 -4.2557078298908495 23.45193391062502 0.9930602646582971 1.1186973343683386 0.1385735846688907 0.09535037524298524 620.1834806381083 2537432.9079363896 0.02583026895226573 0.2172750448677746 5.549989610227548e-05 4.2557078298908495 0.12563706971004152 DDWLHNR ddPTM_KYSE-520_SHP099_60min_R1 3 DDWLHNR 7 0 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 0 ;; 154.35 0.0020519 807440000.0 1270550.0 1216640.0 848710.0 851960.0 1330320.0 1319440.0 1059920.0 1148950.0 991630.0 1205330.0 False True 1200070.0587213673 1158190.7881861299 903419.2045840137 932930.0222488858 1435008.615514608 1311204.8855385839 1167067.0574223467 1144964.5606169468 811574.9889580391 1194651.7139325496 1.0045355016241357 0.9694798698891095 0.7562197367215437 0.7809221812254139 1.2011941210805723 1.0975624696693942 0.9769098757499791 0.9584086702960122 0.679340245774645 1.0 20.18815864876888 -3.0400597335165025 2.1887314902900044 0.9394046873149056 10.016403757944186 0.01829289180371363 0.1503774432871227 1410.5316105325708 62.03124645373094 0.04248855661010186 62812.02120021119 0.0009118854086389694 3.0400597335165025 9.076999070629281 DEAQNEGPATESEAPLKEDGLLPKPLS(ph)SGGEEEEKPR ddPTM_KYSE-520_SHP099_60min_R1 3 DEAQNEGPATESEAPLKEDGLLPKPLSSGGEEEEKPR 37 3 Q8N163-2;Q8N163;G3V119;H0YB24 Q8N163-2 CCAR2 Cell cycle and apoptosis regulator protein 2 1 DEAQNEGPATESEAPLKEDGLLPKPLS(0.5)S(0.5)GGEEEEKPR;DEAQNEGPATESEAPLKEDGLLPKPLS(0.604)S(0.396)GGEEEEKPR;DEAQNEGPATESEAPLKEDGLLPKPLS(0.597)S(0.403)GGEEEEKPR 298.29 6.987e-54 4946630000.0 1080760.0 977630.0 962520.0 1009300.0 975800.0 968700.0 888070.0 1005610.0 1110990.0 927890.0 True False 1020808.088358354 930663.1873474524 1024565.5792864523 1105223.5685428893 1052589.90845748 962653.983978981 977844.7823279718 1002121.7736211396 909262.2217787817 919669.6164874971 1.1099726141406476 1.0119538263120436 1.1140583106350574 1.201761533412488 1.1445304809325403 1.0467389231098605 1.0632565921473667 1.0896541058391738 0.9886835505684483 1.0 19.810756152715435 -7.469055317113626 0.966518177259039 0.9943700639235954 1.1084212767266723 0.3920247850655545 0.050418193936158054 0.6412648671193041 1.106840749633611 0.05127407968767971 0.019385598712991458 3.395820164723831e-08 7.469055317113626 0.11405121280307695 DEDDADYKPK ddPTM_KYSE-520_SHP099_60min_R1 1 DEDDADYKPK 10 1 P11387 P11387 TOP1 DNA topoisomerase 1 0 55.401 0.062539 994790000.0 1838500.0 1669500.0 1370100.0 948720.0 1442900.0 1666600.0 1502200.0 1713500.0 1820900.0 1436600.0 False True 1736514.740041114 1589294.7140294116 1458418.8382375075 1038886.0635569311 1556448.0210220292 1656198.131206121 1654057.036059183 1707556.2684339082 1490270.4611535494 1423872.841657888 1.2195715019181075 1.1161774194519467 1.024261995572158 0.729619972488065 1.0931088616099855 1.1631643520061279 1.1616606396771216 1.1992336804778951 1.0466317058329109 1.0 20.441388882130717 -5.986575795553723 24.999879512732956 1.1294022085629185 1.0145038483310567 0.09692995425696616 0.12817843525620787 486.57818401123586 906148.6210280082 0.04219463820581171 0.047821860586969 1.0313930591227653e-06 5.986575795553723 -0.11489836023186184 DEDEWKELEQK ddPTM_KYSE-520_SHP099_60min_R1 4 DEDEWKELEQK 11 1 Q9UKY7-2;Q9UKY7;H0Y8K3 Q9UKY7-2 CDV3 Protein CDV3 homolog 0 ;;; 178.32 5.9836e-06 2340570000.0 2481120.0 2419420.0 1732470.0 1619480.0 2576200.0 2638040.0 1833950.0 2180700.0 2350870.0 2401640.0 False True 2343487.327609901 2303187.431576544 1844147.7882500088 1773394.8922855842 2778932.2834270895 2621575.0138287484 2019343.5636271737 2173135.6606792086 1924011.268610055 2380363.338047648 0.9845082429861349 0.9675780981678188 0.7747337386579655 0.7450101688005775 1.1674403814782093 1.1013339736525014 0.848334172918081 0.9129428377356855 0.8082847008508002 1.0 21.182750372265655 -4.54594249423828 24.980689861169477 0.9197204587370547 0.9802761126567273 0.029660597292362034 0.1303518488905911 933.5937673278361 1011186.4942880343 0.035950120146178606 0.09512825709057778 2.8448377729121615e-05 4.54594249423828 0.06055565391967266 DEDGES(ph)GGQRSEAEEGEVR ddPTM_KYSE-520_SHP099_60min_R1 1 DEDGESGGQRSEAEEGEVR 19 1 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0;Q9H4G0-4;H7C2K6 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 DEDGES(0.5)GGQRS(0.5)EAEEGEVR 62.273999999999994 0.013372 11794000.0 6622.5 6740.5 6562.6 6696.3 5533.1 5094.0 5224.2 4337.3 5844.6 3889.0 True False 6255.136723373551 6416.676262303233 6985.63569653126 7332.714338683991 5968.523490967492 5062.2064564766415 5752.3131192786495 4322.254918633428 4783.367970376211 3854.546485596216 1.6227944705681803 1.6647033020048558 1.8123106629107708 1.9023546261758928 1.5484372839375133 1.3133079275067108 1.4923449855317776 1.1213394195101705 1.2409677735761764 1.0 11.912345411606472 -6.746689110219713 0.7764431286722586 1.0740967839782276 1.7543400569230863 0.8027359743742488 0.12495001371645933 0.299870003169112 0.3568952474960152 0.10874853108237403 0.0675655270729632 1.791888118446692e-07 6.746689110219713 0.6802432729448586 DEDGESGGQRS(ph)EAEEGEVR ddPTM_KYSE-520_SHP099_60min_R1 1 DEDGESGGQRSEAEEGEVR 19 1 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0;Q9H4G0-4;H7C2K6 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 DEDGES(0.25)GGQRS(0.75)EAEEGEVR 65.753 0.011457 8049900.0 13975.0 13929.0 10755.0 10233.0 11452.0 10131.0 9126.2 10329.0 12071.0 7963.1 True False 13199.778891528167 13259.829932144745 11448.28450860843 11205.541243336367 12353.207247033251 10067.76867109636 10048.765359128822 10293.171109806728 9879.210685147185 7892.553129198055 1.6724345944148706 1.6800431641176734 1.4505172561026098 1.4197612686168812 1.5651725170316888 1.2756035349133372 1.2731957827377787 1.3041624099719673 1.251712915127502 1.0 12.946276351821833 -1.0000000000037068 0.10327857951407565 0.7893489698184215 3.4915720701763076 0.8752088070944561 0.07104293845551893 40.39130298918205 0.294831152473854 0.8406346771562936 15.489631689843716 0.09999999999914648 1.0000000000037068 2.702223100357886 DEDHIAHIIELLGS(ph)IPR ddPTM_KYSE-520_SHP099_60min_R1 2 DEDHIAHIIELLGSIPR 17 0 P78362;P78362-2;F8WBW4;H7C521 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 DEDHIAHIIELLGS(1)IPR;DEDHIAHIIELLGS(1)IPR 123.14 5.6152e-05 106615000.0 99707.0 92952.0 89189.0 86877.0 93802.0 82231.0 73482.0 86568.0 109046.0 78396.0 True False 94176.05394902313 88486.44639620352 94938.26564744554 95133.76395947751 101183.68373962751 81717.76582695922 80910.27767521031 86267.7158131231 89245.99522595965 77701.47243116514 1.2120240582628938 1.1388001234415819 1.2218335467394172 1.2243495648522678 1.3022106348018694 1.051688768180707 1.0412965822094018 1.1102455733969097 1.148575341413532 1.0 16.245654317294566 -6.278259206556321 24.86522344839642 1.0754350505309422 1.2157020588792908 0.669227196261331 0.05244482286475311 518.6045834419878 766665.5466543442 0.019260704138293727 0.017030143822793428 5.269152807230529e-07 6.278259206556321 0.1402670083483486 DEDMLYS(ph)PELAQR ddPTM_KYSE-520_SHP099_60min_R1 5 DEDMLYSPELAQR 13 0 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 DEDMLY(0.038)S(0.962)PELAQR;DEDMLYS(1)PELAQR;DEDMLY(0.003)S(0.997)PELAQR;DEDMLYS(1)PELAQR;DEDMLYS(1)PELAQR 134.9 1.5274e-05 1829660000.0 2305980.0 2225330.0 1875320.0 2003120.0 2113880.0 2109200.0 1947910.0 2205060.0 2484610.0 2119380.0 True False 2178062.6925428365 2118421.806511574 1996206.1278180918 2193495.9225400095 2280230.329668064 2096035.7004319862 2144823.7525695954 2197411.1615248723 2033467.455921097 2100603.9420526912 1.0368745144857976 1.0084822579364825 0.9503010481201978 1.0442215586801884 1.085511782597077 0.9978252722803895 1.0210509985398262 1.0460854221655806 0.9680394362842197 1.0 21.00237274432919 -3.3835719657776875 3.5945438918310595 1.0161421424643466 4.491486331018818 0.029730522738331766 0.03718885069690713 3486.4268037818483 250.54219373385345 0.009707400353380444 98457.53598348834 0.0004134547961817085 3.3835719657776875 3.4753441885544714 DEDRHDINK ddPTM_KYSE-520_SHP099_60min_R1 2 DEDRHDINK 9 1 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 ; 84.17 0.005891899999999999 1319120000.0 2298530.0 2515100.0 1603080.0 1495560.0 2557200.0 2623500.0 1778420.0 2161570.0 2198160.0 2005000.0 False True 2171025.9588940428 2394270.8207579353 1706417.101818689 1637697.5727434915 2758437.0915223015 2607125.7633620845 1958200.0493066 2154072.0181842325 1799029.5551042273 1987237.259866394 1.0924845275093147 1.2048238371491218 0.8586881578163519 0.8241077227253666 1.3880763747896698 1.3119348232919943 0.9853881511049434 1.0839531150543418 0.9052917794149953 1.0 20.922332698176632 -7.5160529065928205 2.19125505844864 0.95920940810922 1.1004300807487504 0.08971464982938382 0.17138622402908651 0.9302224298268622 8.20566170130377 0.15683172641986362 0.051915096569575186 3.047523711787318e-08 7.5160529065928205 0.14122067263953042 DEDVDVLPSTVEDS(ph)PFSR ddPTM_KYSE-520_SHP099_60min_R1 2 DEDVDVLPSTVEDSPFSR 18 0 Q7Z2Z1;Q7Z2Z1-2;H0YN97 Q7Z2Z1 TICRR Treslin 1 DEDVDVLPSTVEDS(0.988)PFS(0.012)R;DEDVDVLPSTVEDS(0.995)PFS(0.005)R 321.76 6.670699999999999e-48 134149000.0 168601.0 192990.0 139600.0 131337.0 146014.0 158533.0 141425.0 140574.0 188840.0 171937.0 True False 159248.366432239 183718.47071610438 148598.83936789737 143819.228992091 157504.47109398458 157543.5367421694 155721.61917499008 140086.3816042181 154551.41626900795 170413.77194496183 0.9344806151211248 1.0780729081886617 0.8719884412621887 0.8439413513981722 0.9242473146175854 0.9244765545888562 0.9137854141582122 0.8220367403724946 0.9069185811984908 1.0 17.378682405739035 -4.777849847692983 24.999993352388305 0.8946667936696633 1.006276785382041 0.3524912642549777 0.056609397100139236 201.75491654849262 307357.5935656007 0.014174976922299328 0.029647152072082596 1.667823743699885e-05 4.777849847692983 0.11160999171237762 DEDYKQR ddPTM_KYSE-520_SHP099_60min_R1 4 DEDYKQR 7 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;Q5RI18;A0A1W2PP35;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7;A0A1W2PQD4 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ;;; 139.31 0.0018597000000000002 3441440000.0 5596770.0 5542110.0 4113940.0 2779880.0 4671260.0 4552720.0 3118300.0 3177140.0 5120540.0 4138060.0 False True 5286306.01121561 5275858.716723291 4379131.15493673 3044078.959398603 5038861.586166306 4524304.785734261 3433528.1956752418 3166119.242890054 4190779.0143089634 4101400.0077619622 1.2889028139686924 1.2863555631585917 1.067716181462222 0.7422048455741057 1.2285711163578739 1.1031122975500915 0.8371600402733791 0.7719606078163859 1.0217923163743723 1.0 21.96768502527215 -4.867488888267591 3.891506653820957 0.9572585621341706 1.2897870589324565 0.46087629481946546 0.1405248669406448 0.1984144160871322 5.548635583496692 0.03961876391483406 0.09233756396924778 1.3567852441687493e-05 4.867488888267591 0.3325284967982859 DEEEDEES(ph)DDADDTPILKPVSLLR ddPTM_KYSE-520_SHP099_60min_R1 2 DEEEDEESDDADDTPILKPVSLLR 24 1 A0A3B3IS53;A0A3F2YNX6;Q92794;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 DEEEDEES(1)DDADDTPILKPVSLLR;DEEEDEES(1)DDADDTPILKPVSLLR 75.703 0.0094949 33443000.0 41736.0 36949.0 33857.0 35530.0 39406.0 28831.0 34344.0 43171.0 45175.0 33576.0 True False 39420.82088134667 35173.91457842031 36039.47639311535 38906.76051751597 42507.02801053024 28651.055034683573 37815.82668513949 43021.24987718717 36972.35876907662 33278.54276173274 1.184571727301623 1.0569547720360843 1.0829643789137737 1.1691245255563043 1.277310377286394 0.8609468040658815 1.136342626415247 1.2927624320935607 1.1109969277738758 1.0 15.022304640058174 -6.996935448078497 24.99998025126805 1.1640383413784776 1.1033025764959845 0.0 0.1219860077247036 329.2132414022856 2685637.679413126 0.051102264114927146 0.03425444099535685 1.0070813465650333e-07 6.996935448078497 -0.060735764882493104 DEEEEKEVENEDEDDDDS(ph)DKEK ddPTM_KYSE-520_SHP099_60min_R1 2 DEEEEKEVENEDEDDDDSDKEK 22 2 Q9P287-4;Q9P287-3;Q9P287;Q9P287-2 Q9P287-4 BCCIP BRCA2 and CDKN1A-interacting protein 1 DEEEEKEVENEDEDDDDS(1)DKEK;DEEEEKEVENEDEDDDDS(1)DKEK 95.307 0.00049397 1124250000.0 1809170.0 1542150.0 1337580.0 1546890.0 1581530.0 1540030.0 1927420.0 1726100.0 1679330.0 1503930.0 True False 1708811.733609018 1468062.7991856562 1423802.5470036706 1693905.9605105608 1705987.4133252269 1530418.1015248757 2122262.423406462 1720112.5619747704 1374406.0044642717 1490606.3502398361 1.1463869943490264 0.9848762545184698 0.955183470655806 1.1363871891717179 1.1444922484401976 1.02670842726427 1.4237578037051792 1.1539683577075914 0.922044914301574 1.0 20.50746788023867 -5.287510693676301 23.263936763345338 1.1321251798303025 1.0244216430154913 0.07081199451727072 0.1340278362818143 690.2109588637886 615886.7491075047 0.03852436706883042 0.05717271262243545 5.158094640881075e-06 5.287510693676301 -0.10770353681481115 DEEPSGWEEPS(ph)PQSISR ddPTM_KYSE-520_SHP099_60min_R1 1 DEEPSGWEEPSPQSISR 17 0 Q9UPQ9-1;Q9UPQ9;H0Y720 Q9UPQ9-1 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 DEEPSGWEEPS(1)PQSISR 251.04 8.0387e-28 323460000.0 342400.0 346750.0 271430.0 242280.0 283800.0 306070.0 290190.0 342410.0 366850.0 299970.0 True False 323406.3894425218 330091.6095176389 288926.81210335536 265306.21835586196 306133.4453988858 304159.70359909785 319525.2371814768 341222.25962909457 300239.2875359329 297312.49917312874 1.0877658703955069 1.1102513699749383 0.9717950402586664 0.8923480146099437 1.0296689384075324 1.0230303281732596 1.074711753021232 1.147688915124946 1.009844148399223 1.0 18.181620590612187 -6.709121324714046 5.12451844442607 1.0704348214846613 1.0152455417319575 0.06047258211341955 0.0679168531777522 0.4705191618426707 26.159493862887896 0.029100360909611763 0.021812275583614524 1.953793566824353e-07 6.709121324714046 -0.055189279752703824 DEEVHAGLGELLR ddPTM_KYSE-520_SHP099_60min_R1 6 DEEVHAGLGELLR 13 0 P50454;E9PR70;E9PPV6;E9PK86;E9PMI5;E9PNX1;E9PQ34;E9PIG2;E9PRS3;E9PJH8 P50454 SERPINH1 Serpin H1 0 ;;;;; 190.37 4.1091e-08 2411340000.0 3982580.0 3384420.0 2227010.0 2289260.0 3704500.0 3614870.0 2756010.0 3067640.0 2899970.0 2974690.0 False True 3761658.348323599 3221827.383082015 2370566.6279419884 2506830.582108884 3996023.074278261 3592308.255462061 3034614.386865578 3056999.072832557 2373408.550294612 2948336.560873798 1.2758578509126368 1.0927610591808292 0.8040352853201481 0.8502525170891396 1.3553483436415958 1.2184186510909762 1.0292632215523623 1.0368555318279384 0.8049991923551649 1.0 21.49146979083613 -7.594670598179562 6.136539610240257 0.9034918849425709 1.0811757929723547 0.15942116241788107 0.16852360825414195 0.4342689276879473 28.062709221811332 0.1274525929690168 0.04676428916142232 2.5429007027321658e-08 7.594670598179562 0.17768390802978373 DEFEELDS(ph)VPLVK ddPTM_KYSE-520_SHP099_60min_R1 1 DEFEELDSVPLVK 13 0 O43164-2;O43164 O43164-2 PJA2 E3 ubiquitin-protein ligase Praja-2 1 DEFEELDS(1)VPLVK 151.07 5.6813e-06 56181000.0 155720.0 122540.0 127850.0 137370.0 113130.0 133610.0 139420.0 148200.0 139960.0 132060.0 True False 147081.9011798761 116652.9944637101 136091.4155672328 150425.60349820333 122032.6873783506 132776.09042988712 153513.9342080757 147685.9287901399 114546.79210448173 130890.05114112515 1.1237057354442697 0.8912288859749569 1.0397384245843067 1.1492516213934016 0.9323297402243004 1.0144093402998862 1.172846468235829 1.1283205064295185 0.8751374998010951 1.0 16.997995917672338 DEFEFLEK ddPTM_KYSE-520_SHP099_60min_R1 2 DEFEFLEK 8 0 A0A3B3IUA7;Q14258 A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 0 ; 126.41 0.0064954999999999995 76064000.0 82959.0 100025.0 89086.0 50495.0 81356.0 94482.0 68317.0 84450.0 93833.0 83374.0 False True 78357.09889533346 95219.64885941398 94828.62610263977 55294.02961812467 87758.25434768046 93892.30279168155 75223.14906966795 84157.0626607781 76795.29253743804 82635.3712239905 0.9482271058350981 1.1522868167592868 1.1475549113901646 0.6691327067224675 1.061993829613277 1.1362241301872795 0.9103020650293799 1.0184145289631836 0.9293271319527033 1.0 16.33447182422652 DEFEGLFK ddPTM_KYSE-520_SHP099_60min_R1 6 DEFEGLFK 8 0 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 0 ;;;;; 163.77 0.0014470000000000002 2281050000.0 2336210.0 2706740.0 2042430.0 1459580.0 2526190.0 2921670.0 1975740.0 2196890.0 2387980.0 2415520.0 False True 2206615.774180828 2576704.147500431 2174088.3058035434 1598298.0443612712 2724986.780945069 2903434.773791543 2175467.0805642186 2189269.5013479833 1954383.028077023 2394120.3720461237 0.9216812153412964 1.076263406629911 0.9080948189524276 0.6675930178879408 1.1381995712338273 1.2127355030650093 0.9086707193026247 0.9144358516430543 0.8163261341812645 1.0 21.191064259528844 DEHFDFIQSHIR ddPTM_KYSE-520_SHP099_60min_R1 1 DEHFDFIQSHIR 12 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 0 179.67 7.580599999999999e-07 626420000.0 40743.0 33158.0 18500.0 14643.0 26845.0 24870.0 25152.0 24233.0 23312.0 27850.0 False True 38482.90457084313 31565.03990882731 19692.53960104657 16034.666317421512 28957.548772843853 24714.7771049419 27694.60961986457 24148.94137902473 19079.128447697047 27603.27066697214 1.3941429273049402 1.1435253557324099 0.7134132704284599 0.5808973331775248 1.049062233320493 0.8953568366271037 1.0033089902278036 0.8748579713750884 0.6911908620497498 1.0 14.75255159928702 -4.545557940545991 4.080387700672001 0.8519594079612608 1.3545266799464581 0.5952159034802702 0.14442697476652322 0.13747747228662088 5.093774649760291 0.03914456355010591 0.13482455016766476 2.8473579001662526e-05 4.545557940545991 0.5025672719851974 DEHLDFIQSHLR ddPTM_KYSE-520_SHP099_60min_R1 3 DEHLDFIQSHLR 12 0 O43237;O43237-2;B4E2E0 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 0 ;; 248.77 1.3843e-15 1636710000.0 852394.0 758858.0 433043.0 425540.0 674224.0 661578.0 538588.0 557494.0 476612.0 573503.0 False True 805110.0056146882 722401.3226109203 460957.6446732976 465983.1936567332 727281.5929901971 657448.8463021019 593033.731152338 555560.1834340784 390071.2752107833 568422.2095985825 1.4163943491638964 1.270888628931437 0.8109423539217865 0.8197835795082826 1.2794742723086077 1.156620616155005 1.0432979590490246 0.9773724074335743 0.6862351059193308 1.0 19.11660339962228 -4.593990989712428 5.707451407203364 0.9864787441517019 1.3829856764717006 0.45930835326226394 0.1639615491899916 0.1717395859493082 9.766321581475424 0.04517700809533204 0.1256157834579515 2.5468830921028734e-05 4.593990989712428 0.3965069323199987 DEHLLK ddPTM_KYSE-520_SHP099_60min_R1 4 DEHLLK 6 0 O00629;O00505 O00629;O00505 KPNA4;KPNA3 Importin subunit alpha-3;Importin subunit alpha-4 0 ;;; 121.68 0.013615 2165390000.0 6727620.0 6325420.0 4322840.0 4003250.0 6561310.0 6535260.0 4674920.0 5612290.0 5504800.0 5502930.0 False True 6354425.507422028 6021537.328551015 4601497.183188553 4383717.676378996 7077647.7682528645 6494471.018208391 5147506.536422448 5592822.275908333 4505267.084715279 5454178.321414761 1.1650564270098436 1.1040228195159352 0.8436646020761142 0.8037356716349351 1.2976560998132145 1.1907331655639355 0.9437730549094395 1.0254197692710585 0.8260212298204903 1.0 22.37893043848369 DEILPTT(ph)PISEQK ddPTM_KYSE-520_SHP099_60min_R1 14 DEILPTTPISEQK 13 0 E9PPU1;E9PL09;P23396;P23396-2;H0YEU2;E9PSF4 E9PPU1 RPS3 40S ribosomal protein S3 1 DEILPT(0.205)T(0.795)PISEQK;DEILPT(0.009)T(0.991)PISEQK;DEILPT(0.06)T(0.94)PISEQK;DEILPT(0.002)T(0.998)PISEQK;DEILPT(0.014)T(0.986)PISEQK;DEILPT(0.047)T(0.951)PIS(0.001)EQK;DEILPT(0.034)T(0.965)PIS(0.001)EQK;DEILPT(0.02)T(0.98)PISEQK;DEILPT(0.003)T(0.996)PIS(0.001)EQK;DEILPT(0.006)T(0.993)PIS(0.002)EQK;DEILPT(0.01)T(0.99)PIS(0.001)EQK;DEILPT(0.196)T(0.804)PISEQK;DEILPT(0.015)T(0.985)PISEQK;DEILPT(0.195)T(0.804)PISEQK 353.96 9.6805e-52 263506800000.0 81222600.0 99894700.0 71218600.0 61156890.0 63494240.0 91796600.0 66072800.0 90767900.0 104217900.0 95626900.0 True False 76717020.46476114 95095608.66699837 75809464.90978892 66969222.43811048 68490875.45519288 91223663.36918026 72752083.43238665 90453047.34028701 85294556.47946317 94779720.0626024 0.809424425542608 1.003332871253337 0.7998490063034207 0.7065775504915717 0.722632177115045 0.9624808272162722 0.7675912461477371 0.954350226826397 0.8999241232525879 1.0 26.498075064104906 -7.277836527295204 24.354454974336058 0.9453529076257148 0.8273283366763884 0.2845805434106645 0.09195708200373233 910.9696447778258 1353041.096885057 0.052473603570287033 0.02533274898445465 5.274283532712576e-08 7.277836527295204 -0.11802457094932639 DEKKEES(ph)EES(ph)DDDMGFGLFD ddPTM_KYSE-520_SHP099_60min_R1 7 DEKKEESEESDDDMGFGLFD 20 2 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 2 DEKKEES(1)EES(1)DDDMGFGLFD;DEKKEES(1)EES(1)DDDMGFGLFD;DEKKEES(1)EES(1)DDDMGFGLFD;DEKKEES(1)EES(1)DDDMGFGLFD;DEKKEES(1)EES(1)DDDMGFGLFD;DEKKEES(1)EES(1)DDDMGFGLFD;DEKKEES(1)EES(1)DDDMGFGLFD 136.24 2.2322999999999998e-06 7416360000.0 3755950.0 4148590.0 3741650.0 2742730.0 3446080.0 3139050.0 2371290.0 2537500.0 5200310.0 2959230.0 True False 3547599.9661993026 3949285.5092394594 3982842.7458516695 3003398.2345681572 3717266.890486933 3119458.0245785215 2611003.134760204 2528698.0047569503 4256064.793147022 2933013.5244461014 1.2095409505038903 1.3464941352376754 1.3579353496516278 1.0239974038767339 1.2673882542662116 1.063567555546008 0.8902117610430353 0.862150134556401 1.4510893856006948 1.0 21.48395229285898 -5.26141283537784 24.999990297104077 1.0732721297241368 1.3088405519311892 0.2742754393858654 0.167358908416996 3.1247364133466387 2941597.4257379775 0.04685472909677907 0.074903648002654 5.477560267337288e-06 5.26141283537784 0.23556842220705243 DEKPIKTEVPGS(ph)PAGTEGNCQEATGPSTVDTQNEPLDMK ddPTM_KYSE-520_SHP099_60min_R1 2 DEKPIKTEVPGSPAGTEGNCQEATGPSTVDTQNEPLDMK 39 2 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2;Q32MZ4-3 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 DEKPIKTEVPGS(0.999)PAGT(0.001)EGNCQEATGPSTVDTQNEPLDMK;DEKPIKT(0.027)EVPGS(0.857)PAGT(0.116)EGNCQEAT(0.001)GPSTVDTQNEPLDMK 240.86 1.7615999999999999e-31 1353810000.0 752470.0 652490.0 536030.0 603580.0 589880.0 715920.0 688660.0 760250.0 678200.0 609190.0 True False 710728.9890882443 621143.4009925433 570583.3514783245 660944.0617270551 636300.2000419123 711451.6777229608 758276.4734739165 757612.8701936832 555055.9760307203 603793.0505426476 1.177106938295315 1.0287355914982832 0.9449982091803202 1.0946533106551062 1.0538382306156877 1.1783038527580882 1.2558549204771898 1.2547558629778746 0.9192818226905298 1.0 19.20369462644344 -6.247256842209029 22.528442497429364 1.1459500022555367 1.053687969958986 0.04793488969910353 0.11269026451647753 459.0373283999676 729162.3715168766 0.03744625450669916 0.03721052636206504 5.659045135358776e-07 6.247256842209029 -0.09226203229655061 DEKPPLCEKPPPS(ph)PDITGR ddPTM_KYSE-520_SHP099_60min_R1 2 DEKPPLCEKPPPSPDITGR 19 2 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 DEKPPLCEKPPPS(0.978)PDIT(0.022)GR;DEKPPLCEKPPPS(0.981)PDIT(0.019)GR 100.27 0.00033713 1062230000.0 378970.0 319630.0 313420.0 330940.0 308330.0 331220.0 370670.0 395500.0 357950.0 411950.0 True False 357947.7786420342 304274.49502558884 333623.5546897305 362392.4380992611 332593.81684227777 329152.7331201791 408140.9409905855 394128.10281039384 292955.30318519054 408300.44349224993 0.8766774181787743 0.7452220536992005 0.8171030916258681 0.8875631752923623 0.8145810815133019 0.8061532588720464 0.9996093501630804 0.9652894310850164 0.7174993509179257 1.0 18.639271609043035 -6.732186400015156 24.999693335799723 0.9177070574931399 0.8230167708507591 0.24170029090904022 0.08325597618686814 310.3593069384728 265233.85888108175 0.031444084511658546 0.024352512550580137 1.85273625482638e-07 6.732186400015156 -0.09469028664238077 DELADEIANSS(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 2 DELADEIANSSGK 13 0 P35579;P35579-2 P35579 MYH9 Myosin-9 1 DELADEIANS(0.034)S(0.966)GK;DELADEIANS(0.013)S(0.987)GK 156.6 2.4e-06 364010000.0 1624870.0 1324810.0 1297210.0 1436700.0 1471530.0 1446360.0 1443600.0 1466160.0 1577340.0 1521470.0 True False 1534735.222001959 1261164.1390196476 1380830.2322093851 1573243.5360403939 1587331.039139613 1437332.7307400003 1589533.1761782956 1461074.2331643163 1290934.8175055976 1507990.9594857497 1.0177350284151103 0.8363207558284871 0.9156754047652059 1.043271198772237 1.0526131003337842 0.9531441297434269 1.0540734121644557 0.9688879260009404 0.856062703416888 1.0 20.524196348896155 -5.228390149336559 21.40827984680198 0.9922031451642589 0.9145512251156256 0.15940321618434738 0.06893302889578491 186.09805877537147 120546.11802901053 0.018779439637036915 0.032518688770841526 5.910304422052601e-06 5.228390149336559 -0.0776519200486333 DELAELS(ph)EAES(ph)EGDEKPK ddPTM_KYSE-520_SHP099_60min_R1 1 DELAELSEAESEGDEKPK 18 1 H3BTW3;Q3L8U1-2;Q3L8U1-3;Q3L8U1 H3BTW3 CHD9 Chromodomain-helicase-DNA-binding protein 9 2 DELAELS(1)EAES(1)EGDEKPK 112.47 9.492700000000001e-05 0.0 1268900.0 944430.0 1011700.0 1057300.0 1101900.0 1001100.0 1051500.0 1250600.0 1160800.0 1030200.0 True False 1198511.5875105609 899058.1651816698 1076915.8007772348 1157785.474111164 1188613.261046623 994851.7635608113 1157795.8816510641 1246261.9604922335 950027.9813866983 1021073.2294834725 1.1737763295555683 0.8805031208549791 1.0546900747970949 1.1338907344548144 1.1640822878569674 0.9743197009131991 1.1339009272006426 1.220541215366773 0.9304210060107896 1.0 19.96165490667028 -4.9970480952459555 24.992675286256823 1.0904958742817594 1.0122539609846568 0.02635301124436107 0.10809810030957981 232.12008539028054 1965190.4107623915 0.026992671436405727 0.05569734155471938 1.0068201639931993e-05 4.9970480952459555 -0.07824191329710262 DELDELKEAFAK ddPTM_KYSE-520_SHP099_60min_R1 3 DELDELKEAFAK 12 1 P13797;U3KQI3;F2Z2Z9 P13797 PLS3 Plastin-3 0 ;; 147.18 2.61e-05 134418000.0 217158.0 199645.0 127600.0 138853.0 204635.0 207957.0 171222.0 177498.0 172189.0 171096.0 False True 205111.81284625948 190053.75452674576 135825.3001672184 152049.54737232317 220738.61028612 206659.0632252678 188530.79072568612 176882.30086634445 140923.81813145633 169580.22255067367 1.2095267346695946 1.1207306587297008 0.8009501233354692 0.8966231149206564 1.3016766163292377 1.2186507371961628 1.1117498720663 1.0430597283447294 0.8310156456443245 1.0 17.371608398513434 -7.593883921149494 6.30253770090142 0.9177992146754419 1.0884205013071804 0.18892549282120075 0.14577041894677326 0.4009921055921181 27.2781542465492 0.11172705702662511 0.041108490641116824 2.5475110639989925e-08 7.593883921149494 0.17062128663173848 DELEVIHLIEEHR ddPTM_KYSE-520_SHP099_60min_R1 3 DELEVIHLIEEHR 13 0 P10155-3;P10155-5;P10155-4;P10155 P10155-3 TROVE2 60 kDa SS-A/Ro ribonucleoprotein 0 ;; 240.59 8.0919e-16 273920000.0 303084.0 220064.0 146157.0 129927.0 247749.0 206552.0 172798.0 156267.0 164968.0 176150.0 False True 286271.3263370253 209491.7951172018 155578.51407946844 142275.2230160232 267245.4368010165 205262.83235142592 190266.10818596347 155724.94624999206 135013.96970485948 174589.44804262606 1.6396828648380406 1.1999109766705622 0.8911106359731655 0.814913069553245 1.5307078394323606 1.175688649300907 1.08979156712558 0.8919493588866366 0.773322621833914 1.0 17.41360684144195 -4.326711423774048 3.1571185552607623 1.0361154397496612 1.6884505545193096 0.4456396768798835 0.20760764450018063 0.29830975567267126 4.773886309779984 0.05717541199604784 0.43670825486313347 4.712903813173516e-05 4.326711423774048 0.6523351147696483 DELHIVEAEAMNY(ph)EGSPIKVTLATLK ddPTM_KYSE-520_SHP099_60min_R1 3 DELHIVEAEAMNYEGSPIKVTLATLK 26 1 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 1 DELHIVEAEAMNY(0.687)EGS(0.312)PIKVT(0.001)LATLK;DELHIVEAEAMNY(0.527)EGS(0.47)PIKVT(0.002)LATLK;DELHIVEAEAMNY(0.542)EGS(0.453)PIKVT(0.005)LATLK 111.35 6.171800000000001e-05 503222000.0 214106.0 236400.0 240861.0 246326.0 210752.0 233181.0 204796.0 210765.0 287629.0 189689.0 True False 202229.11337027067 225042.98915636603 256387.28545122567 269736.74897938775 227336.98338515096 231725.63088489982 225498.77829634945 210033.9054079207 235402.82413703902 188008.50303580874 1.0756381233020798 1.1969830381209066 1.3637004779639847 1.4347050512285222 1.2091845832198962 1.2325273971292914 1.1994073387914812 1.1171510969794645 1.2520860510878244 1.0 17.520438386393895 -8.489824389331133 0.5159678889666476 0.9918385740187433 1.2616353859001936 0.33519194219524595 0.09899684043207674 2.283325413874191 1.1189140494187246 0.16867678642829362 0.054888437421629264 3.237245312363273e-09 8.489824389331133 0.2697968118814503 DELHIVEAEAMNYEGS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 78 DELHIVEAEAMNYEGSPIK 19 0 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 1 DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.002)EGS(0.998)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.006)EGS(0.994)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.006)EGS(0.994)PIK;DELHIVEAEAMNY(0.254)EGS(0.746)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.005)EGS(0.995)PIK;DELHIVEAEAMNY(0.014)EGS(0.986)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.007)EGS(0.993)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.001)EGS(0.999)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.007)EGS(0.993)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNYEGS(1)PIK;DELHIVEAEAMNY(0.004)EGS(0.996)PIK 319.52 9.7639e-54 114622538000.0 25170020.0 22857728.0 21598742.0 26257553.0 22473351.0 24730637.0 24303133.0 27196723.0 25821200.0 22844711.0 True False 23773788.815409116 21759608.43673077 22991031.46852906 28753062.942498796 24241875.86782416 24576283.92111898 26759930.85936098 27102383.91567586 21132720.97948157 22642324.633456204 1.0499712021742267 0.961014771627241 1.0154006640536197 1.2698812250052007 1.0706443026615944 1.0854134599238616 1.181854394041353 1.196978859477595 0.9333282391091571 1.0 24.432518748043574 -5.034387339793324 24.78971448641871 1.1167105623486546 1.0011715584471308 0.17487251384865965 0.09407124094453452 752.8633088000554 542735.9591218419 0.024630834836738606 0.042690918164740285 9.238738191788016e-06 5.034387339793324 -0.11553900390152383 DELHIVEAEAMNYEGS(ph)PIKVTLATLK ddPTM_KYSE-520_SHP099_60min_R1 65 DELHIVEAEAMNYEGSPIKVTLATLK 26 1 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 1 DELHIVEAEAMNY(0.056)EGS(0.471)PIKVT(0.471)LAT(0.002)LK;DELHIVEAEAMNY(0.147)EGS(0.768)PIKVT(0.077)LAT(0.009)LK;DELHIVEAEAMNY(0.013)EGS(0.986)PIKVT(0.001)LATLK;DELHIVEAEAMNY(0.108)EGS(0.889)PIKVT(0.002)LATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNY(0.106)EGS(0.894)PIKVT(0.001)LATLK;DELHIVEAEAMNY(0.016)EGS(0.936)PIKVT(0.047)LATLK;DELHIVEAEAMNY(0.035)EGS(0.964)PIKVT(0.001)LATLK;DELHIVEAEAMNY(0.001)EGS(0.999)PIKVTLATLK;DELHIVEAEAMNY(0.002)EGS(0.998)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNY(0.002)EGS(0.998)PIKVTLATLK;DELHIVEAEAMNY(0.123)EGS(0.877)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNY(0.002)EGS(0.998)PIKVTLATLK;DELHIVEAEAMNY(0.001)EGS(0.997)PIKVT(0.002)LATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNY(0.002)EGS(0.996)PIKVT(0.001)LATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNY(0.029)EGS(0.884)PIKVT(0.087)LATLK;DELHIVEAEAMNY(0.004)EGS(0.996)PIKVTLATLK;DELHIVEAEAMNY(0.463)EGS(0.53)PIKVT(0.007)LATLK;DELHIVEAEAMNY(0.001)EGS(0.998)PIKVTLATLK;DELHIVEAEAMNY(0.058)EGS(0.932)PIKVT(0.01)LATLK;DELHIVEAEAMNY(0.243)EGS(0.756)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNY(0.001)EGS(0.998)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNY(0.004)EGS(0.996)PIKVTLATLK;DELHIVEAEAMNY(0.001)EGS(0.999)PIKVTLATLK;DELHIVEAEAMNYEGS(0.999)PIKVT(0.001)LATLK;DELHIVEAEAMNY(0.009)EGS(0.986)PIKVT(0.005)LATLK;DELHIVEAEAMNY(0.155)EGS(0.827)PIKVT(0.008)LAT(0.01)LK;DELHIVEAEAMNY(0.005)EGS(0.992)PIKVT(0.002)LATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(0.999)PIKVT(0.001)LATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNY(0.001)EGS(0.999)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNY(0.004)EGS(0.995)PIKVT(0.001)LATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNY(0.103)EGS(0.88)PIKVT(0.017)LATLK;DELHIVEAEAMNY(0.007)EGS(0.984)PIKVT(0.008)LATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNYEGS(1)PIKVTLATLK;DELHIVEAEAMNY(0.001)EGS(0.998)PIKVT(0.001)LATLK;DELHIVEAEAMNY(0.003)EGS(0.992)PIKVT(0.005)LATLK;DELHIVEAEAMNY(0.005)EGS(0.994)PIKVT(0.001)LATLK;DELHIVEAEAMNY(0.001)EGS(0.952)PIKVT(0.02)LAT(0.027)LK;DELHIVEAEAMNY(0.001)EGS(0.999)PIKVTLATLK 362.0 2.6379999999999995e-86 128324877000.0 25448373.0 27928439.0 26761916.0 28382875.0 23597057.0 25223419.2 22068287.0 25657684.5 33694572.0 21807844.6 True False 24036701.019616157 26586714.868998397 28487031.925939564 31080374.906377453 25454011.137011603 25065990.484620545 24299164.815685928 25568683.981018096 27576487.095838036 21614644.06309037 1.1120562961599605 1.2300325090431834 1.3179505451391926 1.4379313772485836 1.17762804988667 1.1596763014674745 1.1241991653787955 1.1829333810164253 1.275824252083255 1.0 24.365505743209987 -5.970097910889749 24.99995729836615 1.1595741218866302 1.2785909585265 0.2648391668685388 0.0988965666780629 304.6222155234276 254681.39867016114 0.031549765708483744 0.035773665045026465 1.0712777604159425e-06 5.970097910889749 0.11901683663986984 DELHIVEAEAMNYEGSPIK ddPTM_KYSE-520_SHP099_60min_R1 15 DELHIVEAEAMNYEGSPIK 19 0 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 0 ;;;;;;;;;;;;;; 233.65 9.9977e-26 16705822000.0 7278759.0 5786611.0 2732621.0 5649792.0 3192496.0 5785143.0 4365545.0 6675936.0 4085643.0 3818099.0 False True 6874991.7284236625 5508613.521679805 2908770.12200819 6186746.5330081 3443727.2723825253 5749035.77664716 4806856.892213407 6652778.736191174 3343793.221878618 3784273.613296069 1.8167269153763976 1.455659416994917 0.7686468842496504 1.6348570862505627 0.9100101166794514 1.5191913598551348 1.2702191710780333 1.7580067976101394 0.883602393370865 1.0 21.851584972556083 -4.394903088407138 4.1448998296568185 1.2541791010238512 1.8031186673144226 0.2399590881284306 0.32148794166246847 0.31885605031968667 8.427109068064691 0.075808982818696 0.3672190566693003 4.028069095269828e-05 4.394903088407138 0.5489395662905714 DELHIVEAEAMNYEGSPIKVT(ph)LATLK ddPTM_KYSE-520_SHP099_60min_R1 1 DELHIVEAEAMNYEGSPIKVTLATLK 26 1 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 1 DELHIVEAEAMNY(0.004)EGS(0.192)PIKVT(0.804)LATLK 157.88 2.6573e-07 79920000.0 71426.0 82377.0 94665.0 81381.0 75638.0 56698.0 60000.0 83809.0 92143.0 74270.0 True False 67463.85739579897 78419.48526960211 100767.25736935544 89115.42577191006 81590.2802786502 56344.126750944764 66065.38554357004 83518.28614016765 75412.1539360051 73612.02558118572 0.9164787528009807 1.065308075011661 1.3688966792283224 1.2106096126050199 1.1083824909649493 0.7654201376214486 0.8974808806301275 1.1345739433301756 1.0244542700816464 1.0 16.167653850031996 -6.021290086370871 24.114542283624914 0.9650913757296676 1.1523172931442014 0.2736380596947626 0.13834801570917032 688.9836575572772 780387.1231395819 0.049314698420889966 0.04984183680159621 9.52159957704551e-07 6.021290086370871 0.18722591741453376 DELNADHPFIYIIR ddPTM_KYSE-520_SHP099_60min_R1 5 DELNADHPFIYIIR 14 0 P36952 P36952 SERPINB5 Serpin B5 0 ;;;; 162.37 6.5854e-08 1641090000.0 2161220.0 1645574.0 1081132.0 1209809.0 1720187.0 1600067.0 1299622.0 1212628.0 1116860.0 1377719.0 False True 2041332.8183147442 1566518.1549830688 1150823.4985923606 1324788.8836176617 1855555.9303748177 1590080.3883382825 1431000.474848427 1208421.6764975027 914066.3777494389 1365513.4815091637 1.4949195639274582 1.147200797499088 0.8427771048590982 0.9701763487193892 1.3588704582572555 1.1644560159017454 1.047957778686218 0.8849577048202825 0.6693938874475365 1.0 20.381012127008773 -7.191121201428078 2.689930448791518 0.8219767079047626 1.1459559558822685 0.3557294736730171 0.1863787356345099 0.34249527869613794 4.80489651290602 0.11709986326851922 0.05622556889605884 6.439895180285655e-08 7.191121201428078 0.3239792479775059 DELNEELIQEES(ph)S(ph)EDEGEYEEVRK ddPTM_KYSE-520_SHP099_60min_R1 3 DELNEELIQEESSEDEGEYEEVRK 24 1 G3V5V3;O60524-4;O60524-5;O60524-3;O60524 G3V5V3 NEMF Nuclear export mediator factor NEMF 2 DELNEELIQEES(1)S(1)EDEGEYEEVRK;DELNEELIQEES(1)S(0.999)EDEGEY(0.001)EEVRK;DELNEELIQEES(1)S(1)EDEGEYEEVRK 111.68 0.00021132 757900000.0 1045990.0 960330.0 912810.0 925160.0 873150.0 858780.0 891140.0 981430.0 1173690.0 904630.0 True False 987966.8495706293 914194.3053152832 971651.1931476388 1013086.9282405045 941861.9374560851 853420.0354717326 981225.1278882842 978025.6483974834 960577.4823171559 896615.6819914901 1.1018844187246841 1.0196055274036129 1.0836874846862883 1.1299009693766653 1.0504633773124488 0.9518236772037996 1.09436534247189 1.090796946831414 1.0713369190505335 1.0 19.774130207077143 -5.969826533252302 24.914503215899245 1.0451342954894598 1.0805557962006462 0.14828217362860652 0.04749097419957632 482.58394923123456 398471.31304657465 0.015565236725407196 0.017649156663256848 1.0719473790505057e-06 5.969826533252302 0.03542150071118644 DELTDLDQS(ph)NVTEETPEGEEHHPVADTENK ddPTM_KYSE-520_SHP099_60min_R1 1 DELTDLDQSNVTEETPEGEEHHPVADTENK 30 0 Q8NC51-4;Q8NC51-3 Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELTDLDQS(0.999)NVTEETPEGEEHHPVADTENK 124.79 0.00024831 1285200000.0 387880.0 366150.0 336680.0 431830.0 368420.0 345470.0 363390.0 474070.0 418110.0 445770.0 True False 366363.5231803903 348559.6043976456 358382.9315070463 472870.99336557614 397412.5579769462 343313.79358441033 400125.00754463184 472425.5618187699 342191.76369537634 441820.8246038124 0.8292128907887358 0.7889161963114899 0.8111499312609671 1.0702777393745686 0.8994880635907376 0.7770430329812207 0.9056273160130697 1.069269567006945 0.7745034743489626 1.0 18.753101894136353 -5.0565563962200475 24.998885962716262 0.9239032487220947 0.8068058287213525 0.23733298245067813 0.09694741640910186 402.9705861706564 178119.1136600842 0.026303326136704174 0.045558908158694185 8.778970785294411e-06 5.0565563962200475 -0.11709742000074219 DELTDLDQS(ph)NVTEETPEGEEHHPVADTENKENEVEEVKEEGPK ddPTM_KYSE-520_SHP099_60min_R1 1 DELTDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPK 43 2 Q8NC51-4;Q8NC51-3 Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELTDLDQS(1)NVTEETPEGEEHHPVADTENKENEVEEVKEEGPK 278.13 4.3826000000000005e-43 1060800000.0 640570.0 559120.0 508410.0 605950.0 509030.0 420890.0 532080.0 540330.0 694700.0 590780.0 True False 605036.3051553634 532259.0359437705 541182.9220847621 663539.3058144891 549087.7650154856 418263.0693887815 585867.8390003797 538455.7213439698 568559.9919618707 585546.1488198846 1.0332854316858875 0.9089958784913718 0.9242361565787213 1.1331972845381917 0.9377361052107035 0.7143127321932745 1.0005493848454872 0.919578623186539 0.9709909169546277 1.0 19.159423353190423 -4.246635230512958 22.66079110880633 0.9424500516524444 1.03328566234421 0.06537210665447857 0.09895933912246885 2225.4237139577635 3406252.4720025714 0.02542892849691753 0.4896360424396824 5.66715080439159e-05 4.246635230512958 0.09083561069176549 DELTDLDQSNVT(ph)EETPEGEEHHPVADTENK ddPTM_KYSE-520_SHP099_60min_R1 2 DELTDLDQSNVTEETPEGEEHHPVADTENK 30 0 Q8NC51-4;Q8NC51-3 Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELTDLDQSNVT(1)EETPEGEEHHPVADTENK;DELTDLDQS(0.001)NVT(0.996)EET(0.003)PEGEEHHPVADTENK 214.98 4.7445e-22 402830000.0 273500.0 244340.0 271430.0 277830.0 247822.0 232990.0 241250.0 277590.0 283580.0 264720.0 True False 258328.40979126678 232601.53963818293 288926.81210335536 304234.8796673645 267324.18148570333 231535.82298674795 265637.90437310474 276627.1050799931 232089.02047005543 262374.78674904373 0.9845778742389327 0.8865239778571471 1.1011988449168635 1.1595431231673916 1.0188638351953903 0.8824621674040934 1.0124368566983615 1.0543204570360696 0.8845705921127397 1.0 18.001269563372166 -6.01912239705523 24.770698958550927 0.9705251942439347 1.035103823645904 0.12739416321290242 0.08323029571938949 1660.7679101513966 2151318.0898866425 0.02934524894287481 0.029799961940653173 9.56924343649707e-07 6.01912239705523 0.06457862940196935 DELTDLDQSNVTEET(ph)PEGEEHHPVADTENKENEVEEVKEEGPK ddPTM_KYSE-520_SHP099_60min_R1 1 DELTDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPK 43 2 Q8NC51-4;Q8NC51-3 Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELTDLDQSNVT(0.007)EET(0.794)PEGEEHHPVADT(0.199)ENKENEVEEVKEEGPK 95.17200000000001 0.00050348 2078200000.0 217690.0 190860.0 165140.0 209870.0 177120.0 143670.0 163830.0 197250.0 237150.0 191970.0 True False 205614.30174574393 181690.79911329935 175785.1886333421 229815.98170028348 191058.33632505484 142773.30223831945 180391.53522671817 196565.78578849602 194089.53806500317 190269.29515040023 1.0806488854820957 0.9549139232879382 0.9238757545950385 1.2078458666629484 1.0041469706083208 0.7503748943068449 0.9480853707064291 1.0330925209615072 1.020078084125887 1.0 17.53768323884251 -6.010510193893929 24.992540962600597 0.9439218005076396 1.0370397328878624 0.14953610558270614 0.10246996130892243 1054.4459082703922 2507408.404514614 0.03468831609725771 0.037007097138426884 9.760898710790365e-07 6.010510193893929 0.09311793238022281 DELTDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPK ddPTM_KYSE-520_SHP099_60min_R1 1 DELTDLDQSNVTEETPEGEEHHPVADTENKENEVEEVKEEGPK 43 2 Q8NC51-4;Q8NC51-3 Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 74.767 0.0033610999999999997 1321900000.0 161700.0 140780.0 87991.0 89988.0 153220.0 137540.0 129460.0 149710.0 117440.0 118090.0 False True 152730.17865904144 134016.71748491193 93663.04065057776 98540.43246412136 165277.54229745318 136681.5618421275 142547.0802078431 149190.69095257684 96115.85642147997 117043.81447262976 1.3048974808895757 1.1450132421671135 0.8002391332903842 0.8419106375515868 1.4120997597536664 1.167781163472675 1.217895032301576 1.274656773831175 0.8211955228437662 1.0 16.836689167404796 -4.330836357891562 4.453104720719816 1.0839169649177738 1.308200345302206 0.11306690244485973 0.19632985321155338 0.4758988649460642 16.902328494670876 0.05199522146051983 0.263504509439952 4.668352506444256e-05 4.330836357891562 0.22428338038443218 DELTES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 DELTESPK 8 0 Q8NC51-2;Q8NC51 Q8NC51-2 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELTES(1)PK;DELTES(1)PK;DELTES(1)PK;DELTES(1)PK;DELT(0.043)ES(0.957)PK;DELTES(1)PK 203.02 1.5796e-06 7945660000.0 14522720.0 13781560.0 12308740.0 13558340.0 14871470.0 14051730.0 15531420.0 18151660.0 18270030.0 16667740.0 True False 13717115.77127542 13119473.171056703 13102181.075080315 14846920.557136439 16041770.08191036 13964027.94084541 17101487.505651932 18088696.128089283 14952653.101976583 16520076.79090549 0.830330024786983 0.794153280103343 0.7931065479243553 0.8987198270960735 0.9710469439670859 0.8452762125496162 1.0351941895976244 1.0949523030091082 0.9051200724568185 1.0 23.97771705711908 -5.8123468040072765 0.7958929705348535 1.0079707333407366 0.7914048346197379 0.5830521896487002 0.06425389724557598 0.4779283267708926 0.6616767973611904 0.03709566378824325 0.05950178288291589 1.5404698260459218e-06 5.8123468040072765 -0.21656589872099874 DELTES(ph)PKYIQK ddPTM_KYSE-520_SHP099_60min_R1 9 DELTESPKYIQK 12 1 Q8NC51-2;Q8NC51 Q8NC51-2 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 DELT(0.131)ES(0.794)PKY(0.076)IQK;DELT(0.018)ES(0.982)PKYIQK;DELTES(1)PKYIQK;DELT(0.004)ES(0.996)PKYIQK;DELT(0.003)ES(0.997)PKYIQK;DELTES(1)PKYIQK;DELT(0.001)ES(0.999)PKYIQK;DELT(0.016)ES(0.984)PKYIQK;DELT(0.029)ES(0.971)PKYIQK 256.77 1.4622e-17 8611240000.0 9278830.0 10691910.0 11226530.0 6987230.0 8495780.0 7499160.0 7214800.0 7603700.0 15541310.0 8422470.0 True False 8764114.803010985 10178254.594715912 11950210.086883107 7651294.238412708 9164349.551624179 7452354.960767843 7944142.393662485 7577324.53941693 12719399.868543182 8347853.468382506 1.0498644754852333 1.2192660823846573 1.4315308878078092 0.9165582826042628 1.097809105817939 0.8927270931376116 0.9516389361350105 0.9076973581431497 1.5236731115032034 1.0 22.992973846116453 -5.277241738932562 24.960179627535872 1.0300076779770955 1.2321250684228815 0.16952260347441994 0.19369260558838075 1301.1719788710618 2055226.8056429063 0.0540826439145475 0.08051780805889211 5.281511880700612e-06 5.277241738932562 0.20211739044578603 DENWDKEIEK ddPTM_KYSE-520_SHP099_60min_R1 3 DENWDKEIEK 10 1 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 0 ;; 138.63 0.00028241 790330000.0 2595040.0 2537650.0 1752660.0 1583820.0 2724860.0 2610660.0 1869600.0 2294420.0 2247250.0 2262660.0 False True 2451087.95811601 2415737.4849096956 1865639.2679551495 1734345.7766071542 2939290.9796674 2594365.9025648413 2058597.4135376413 2286461.192541655 1839206.0485624243 2242614.59272284 1.092959961140739 1.077196898989523 0.8319036512154364 0.7733588206529155 1.3106536402666942 1.1568487563504735 0.9179452502528413 1.0195515537806161 0.8201168647214487 1.0 21.09675027492761 DEPDWESLIFLAR ddPTM_KYSE-520_SHP099_60min_R1 1 DEPDWESLIFLAR 13 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 0 103.22 0.0075452 10971000.0 7806.5 14299.0 12496.0 8345.1 13490.0 12333.0 8733.0 8781.9 13189.0 7624.1 False True 7373.457883128061 13612.054576763425 13301.512154306922 9138.215794954198 14551.586252399456 12256.025172305941 9615.816865866618 8751.43763861087 10794.210067633685 7556.556405460043 0.9757695817370354 1.801356841183365 1.7602610819785347 1.2093095458602434 1.925690151916964 1.6219061321967059 1.2725130800212967 1.1581250994550187 1.4284562290614615 1.0 12.883513219030519 -6.820555222494027 5.6170365155457604 1.2217709409725215 1.5716874772119072 0.24981319474173824 0.282791575351143 0.28570423428636915 18.033695111369166 0.11675977983534015 0.07896424771858497 1.511627476916869e-07 6.820555222494027 0.3499165362393857 DEPPPLS(ph)PAPLTPATPSSLDPFFSR ddPTM_KYSE-520_SHP099_60min_R1 3 DEPPPLSPAPLTPATPSSLDPFFSR 25 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DEPPPLS(1)PAPLTPATPSSLDPFFSR;DEPPPLS(1)PAPLTPATPSSLDPFFSR;DEPPPLS(1)PAPLTPATPSSLDPFFSR 169.13 1.7574e-10 129032000.0 78235.5 92408.0 59457.8 63621.8 68185.1 101126.0 80269.6 116602.5 105499.0 100165.0 True False 73895.62085639738 87968.58097276419 63290.54492384365 69668.39674340838 73550.87944985044 100494.83512321493 88384.03452380247 116198.03314272818 86343.04101336621 99277.61602719071 0.7443331519580247 0.8860867584559128 0.6375107245374353 0.7017533209533073 0.7408606531174753 1.0122607607307053 0.8902715240421905 1.170435368944629 0.8697130780186955 1.0 16.599180851715502 -6.258898718436035 24.579899758053585 0.9930468247150475 0.7420546895527766 0.6251669508809873 0.09537488737574908 117.75223702091638 1139209.3273933975 0.03156897273717902 0.030188620424972192 5.509361649279247e-07 6.258898718436035 -0.2509921351622708 DET(ph)PTLEASLDNANSR ddPTM_KYSE-520_SHP099_60min_R1 4 DETPTLEASLDNANSR 16 0 O94915;H0Y9X0;A0A2C9F2R7;A0A286YEZ9 O94915 FRYL Protein furry homolog-like 1 DET(0.997)PT(0.003)LEASLDNANSR;DET(0.951)PT(0.049)LEASLDNANSR;DET(0.982)PT(0.016)LEAS(0.001)LDNANSR;DET(0.998)PT(0.002)LEASLDNANSR 234.63 4.0101999999999994e-19 804450000.0 1000350.0 1035550.0 814920.0 787280.0 841690.0 969920.0 877060.0 1011970.0 1126680.0 927650.0 True False 944858.5913517147 985800.6236077608 867451.0471181009 862102.8544956374 907926.2144389997 963866.3695064429 965721.7840807268 1008459.7122655726 922103.3132914945 919431.7427007792 1.0276549606349739 1.0721846743207133 0.9434643234852998 0.9376474777379977 0.9874862616468051 1.0483283584218437 1.050346359854809 1.096829340809225 1.0029056758284935 1.0 19.810382949430412 -6.263232436795289 24.381836175338382 1.0464003092294047 0.9921449747924722 0.20460636623320105 0.044312466911121624 175.60512517844887 2387840.402992772 0.016332813203082174 0.015141952935667296 5.454658466332458e-07 6.263232436795289 -0.054255334436932534 DETAVQDYHGHK ddPTM_KYSE-520_SHP099_60min_R1 1 DETAVQDYHGHK 12 0 P48147 P48147 PREP Prolyl endopeptidase 0 93.01100000000001 0.0026555999999999997 486380000.0 1919200.0 1692900.0 1157700.0 1252200.0 1957100.0 1818000.0 1373800.0 1671700.0 1406600.0 1554900.0 False True 1812738.1501696496 1611570.5429052955 1232327.1943854925 1371208.7115123433 2111112.635624236 1806653.1876471394 1512677.1109959423 1665901.2628777118 1151196.8975004572 1541124.795693893 1.1762435821126753 1.045710605272355 0.799628425828186 0.8897454089011365 1.3698518390742687 1.172295191599777 0.9815409597084952 1.0809645445537317 0.7469848650265404 1.0 20.555552261052842 -7.739110010782253 24.98146655676851 0.8734923618960647 1.0602238405018702 0.18430232644258027 0.160531340344903 372.27289909665967 416490.93578504876 0.11607368424440422 0.043798845185448514 1.8234337512922834e-08 7.739110010782253 0.18673147860580552 DETEFYLGK ddPTM_KYSE-520_SHP099_60min_R1 6 DETEFYLGK 9 0 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 0 ;;;;; 186.3 4.5558e-05 2509180000.0 3226660.0 4029310.0 2939480.0 2012050.0 3302430.0 3972230.0 2967840.0 3287140.0 3114030.0 3819890.0 False True 3047670.737612762 3835735.89948239 3128963.584134288 2203274.6270551113 3562312.452743623 3947437.839146092 3267858.230527151 3275737.67856424 2548600.6503080847 3786048.746429454 0.8049739825687555 1.0131237488951494 0.8264456676859088 0.5819456574966118 0.9409050678766795 1.042627315052095 0.8631315784322645 0.8652127581963973 0.6731557940746585 1.0 21.852261555584835 -3.0297671668302177 14.890499094771426 0.8602200693611926 0.8478071474676223 0.0 0.14119361600962338 0.0 0.0 0.03294932715734793 0.0 0.0009337547695429241 3.0297671668302177 -0.012412921893570239 DETEFYLGKR ddPTM_KYSE-520_SHP099_60min_R1 2 DETEFYLGKR 10 1 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 0 ; 97.456 0.0061974 820300000.0 1082230.0 1286810.0 920010.0 659820.0 859480.0 759640.0 610370.0 765730.0 1017440.0 620760.0 False True 1022196.5445279814 1224989.7160588105 979315.3166680463 722529.0944178833 927116.1862277446 754898.804985849 672072.1562371483 763073.8613527257 832698.5435751914 615260.5493439722 1.661404336127042 1.991009690715532 1.5917082896217727 1.1743465352821456 1.5068675981521837 1.226957921795518 1.0923374771123422 1.240245067177411 1.3534079902621168 1.0 19.230837963984538 -5.0711294475531865 3.646503944736465 1.2447552033318126 1.825515351163525 0.7243671113089817 0.15092427280682805 0.11628086392100767 2.984131905625119 0.040986484376210594 0.079858832755167 8.489274026196226e-06 5.0711294475531865 0.5807601478317124 DETYKPHLER ddPTM_KYSE-520_SHP099_60min_R1 4 DETYKPHLER 10 1 A0A0A6YYC7;Q96JP5-2;Q96JP5;H3BTR0 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 0 ;;; 160.15 7.6658e-05 1964320000.0 2766240.0 2345920.0 1720240.0 1624970.0 2656650.0 2244090.0 1913760.0 2156140.0 2019200.0 1983650.0 False True 2612791.152837272 2233218.4819022925 1831129.4228813155 1779406.6602349551 2865713.240729208 2230083.8019070807 2107221.5372977117 2148660.8535868586 1652564.179889752 1966076.4042563452 1.328936732662504 1.1358757355856635 0.9313622903551032 0.9050546847430394 1.4575797942161584 1.1342813519755324 1.0717902583723615 1.0928674231251836 0.8405391450261686 1.0 20.906887957075863 -7.641424287206881 5.6684823024960895 0.9228683221454876 1.129559470363846 0.22322471905637742 0.15920776148566876 0.3351581191801577 14.9207394927586 0.1184014108407622 0.042594540986184745 2.283366961101194e-08 7.641424287206881 0.20669114821835843 DEVFHIHK ddPTM_KYSE-520_SHP099_60min_R1 2 DEVFHIHK 8 0 Q9Y2A7;Q9Y2A7-2 Q9Y2A7 NCKAP1 Nck-associated protein 1 0 ; 125.31 0.0009766 1416310000.0 3538800.0 2810500.0 1943110.0 1755810.0 2900300.0 2503600.0 2083900.0 2251500.0 2036900.0 1999740.0 False True 3342495.709577096 2675479.361353496 2068365.9796859229 1922681.654496473 3128537.109550343 2487974.103736736 2294560.948904095 2243690.0720040514 1667050.3060704388 1982023.8593741802 1.6864053849646805 1.3498724289818957 1.0435626039027628 0.9700597928743177 1.578455826731658 1.25526950241775 1.1576858361476021 1.1320197087397785 0.8410848831036809 1.0 20.918542898949294 -4.399087713821468 2.9161778420876177 1.1447511090517413 1.7084986986071324 0.45568795240663773 0.18923487757209984 0.306492198735649 4.204705921714249 0.051276738598763194 0.3397560626547253 3.989443200239036e-05 4.399087713821468 0.5637475895553912 DEVFHTDQDDPSS(ph)S(ph)DDEGMPYTRPVK ddPTM_KYSE-520_SHP099_60min_R1 2 DEVFHTDQDDPSSSDDEGMPYTRPVK 26 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 2 DEVFHT(0.002)DQDDPS(0.532)S(0.566)S(0.872)DDEGMPY(0.017)T(0.012)RPVK;DEVFHTDQDDPS(0.485)S(0.549)S(0.96)DDEGMPY(0.001)T(0.005)RPVK 95.302 0.0027091999999999997 1086480000.0 511160.0 432110.0 469550.0 445580.0 457620.0 458360.0 422340.0 456290.0 563600.0 490390.0 True False 482804.9358278026 411350.7869896667 499817.94430656283 487927.7892314881 493632.0904983725 455499.205219991 465034.2488411903 454707.2364888869 461264.44719981414 486045.5261176464 0.9933327433013766 0.8463215169891307 1.0283356546842957 1.0038726066030819 1.015608752623082 0.9371533750312481 0.9567709686697736 0.9355239623763677 0.9490149017196506 1.0 18.89073192659718 -4.775207668719205 24.999993220864155 0.9759917862969519 0.9198270791611322 0.20757496571905998 0.045511038926187776 329.9256342581236 599070.0546278459 0.012015531611882185 0.025222410516354807 1.6780014480836196e-05 4.775207668719205 -0.05616470713581978 DEVQEVVFVPAGT(ph)HTPGSR ddPTM_KYSE-520_SHP099_60min_R1 2 DEVQEVVFVPAGTHTPGSR 19 0 J3KS57;J3KT79;J3QR84;J3QRJ1;J3QL71;Q96FV2-2;Q96FV2 J3KS57 SCRN2 Secernin-2 1 DEVQEVVFVPAGT(0.649)HT(0.331)PGS(0.021)R;DEVQEVVFVPAGT(0.688)HT(0.307)PGS(0.005)R 94.542 0.00053225 415120000.0 339566.0 416400.0 323527.0 201360.0 250055.0 344020.0 296086.0 279230.0 345139.0 324574.0 True False 320729.5970719611 396395.5189708571 344382.06808150234 220497.19385890872 269732.9058816713 341872.84357226023 326017.2624008917 278261.4163027717 282470.457846161 321698.52687475085 0.9969880813188585 1.2321956299327057 1.0705117969520048 0.6854156156728577 0.8384648462710813 1.0627118715571986 1.013424791117624 0.8649757243405382 0.8780595316687203 1.0 18.295349804038413 -5.019789600829035 24.70115205642294 0.9063331330651051 1.123782351889103 0.38366245770075436 0.11333451662200146 627.3246297494467 783021.554561724 0.03193501521557474 0.05635107913713712 9.554553557226442e-06 5.019789600829035 0.21744921882399793 DEVQEVVFVPAGTHT(ph)PGSR ddPTM_KYSE-520_SHP099_60min_R1 3 DEVQEVVFVPAGTHTPGSR 19 0 J3KS57;J3KT79;J3QR84;J3QRJ1;J3QL71;Q96FV2-2;Q96FV2 J3KS57 SCRN2 Secernin-2 1 DEVQEVVFVPAGT(0.067)HT(0.918)PGS(0.015)R;DEVQEVVFVPAGT(0.171)HT(0.826)PGS(0.002)R;DEVQEVVFVPAGT(0.057)HT(0.942)PGS(0.002)R 128.4 1.9832999999999998e-05 973760000.0 618675.0 695069.0 504303.0 452438.0 407699.0 560386.0 443188.0 487358.0 582319.0 551032.0 True False 584355.8644519635 661676.8419201601 536811.1782933298 495437.57148955495 439782.5918100079 556888.4231093684 487989.76813806203 485667.4688482118 476584.5486674034 546150.2851764094 1.0699543336560073 1.2115288774525403 0.9829001153408479 0.9071451300799486 0.8052409817344613 1.0196615075088544 0.8935082181279806 0.8892560931124273 0.8726252857553011 1.0 19.058938469254475 -4.934734970048377 4.5124079461701 0.9091141574071447 1.1388325724561146 0.6487879763559155 0.06614581807850957 0.11344449119436684 4.572280978121378 0.017055946398679918 0.03712435080820071 1.1621576088326055e-05 4.934734970048377 0.22971841504896984 DEWLRPEDLPIK ddPTM_KYSE-520_SHP099_60min_R1 2 DEWLRPEDLPIK 12 1 Q5T5C7;P49591 Q5T5C7 SARS Serine--tRNA ligase, cytoplasmic 0 ; 161.25 3.9912e-06 262530000.0 733330.0 597690.0 432800.0 380080.0 707400.0 646170.0 493010.0 497750.0 500110.0 515600.0 False True 692650.7230428879 568976.0752490202 460698.98050448456 416202.6889247811 763068.3554445794 642137.0133454091 542848.2621139251 496023.4214257231 409302.630747159 511032.18513073045 1.355395497967895 1.1133859897757061 0.9015067815868195 0.8144353741991996 1.4931904049240536 1.2565490629149705 1.0622584602475782 0.9706304922826576 0.80093317535852 1.0 18.96305463030864 -7.244446191292898 2.8762216277774013 0.9021192114371452 1.1418649983191311 0.22230781654057852 0.19274261034607348 0.46995968628456214 7.740480732864685 0.12633760102100283 0.05860893479440566 5.695787900710711e-08 7.244446191292898 0.2397457868819859 DFCFGPWK ddPTM_KYSE-520_SHP099_60min_R1 1 DFCFGPWK 8 0 O75663;O75663-2 O75663 TIPRL TIP41-like protein 0 130.04 0.006722 0.0 253530.0 269010.0 209690.0 182550.0 275860.0 267660.0 224690.0 202250.0 208980.0 212060.0 False True 239466.1855004748 256086.355807758 223206.95291586278 199899.49711434133 297568.6125713055 265989.4346565645 247403.85796307935 201548.44195550482 171034.49995709187 210181.31338018365 1.139331473618302 1.2184068682858578 1.0619733473266384 0.9510812065045754 1.4157710206760983 1.2655237060748263 1.177097307007337 0.9589265511484203 0.8137474126813472 1.0 17.681274883545978 -7.323343559007078 4.0745613560622855 0.9030772280347786 1.1775727143726258 0.471039269272445 0.12258465804270566 0.21163021985287908 7.086042177101894 0.07640653997304868 0.03498765542521614 4.749593493690698e-08 7.323343559007078 0.27449548633784715 DFDFESANAQFNKEEIDR ddPTM_KYSE-520_SHP099_60min_R1 1 DFDFESANAQFNKEEIDR 18 1 Q8ND56-2;Q8ND56;Q8ND56-3;A0A140TA76;K7EMZ9 Q8ND56-2 LSM14A Protein LSM14 homolog A 0 212.76 3.9544e-18 373390000.0 313430.0 291180.0 233680.0 258980.0 271630.0 238500.0 274560.0 252690.0 244460.0 258210.0 False True 296043.41309278546 277191.2757299096 248743.3867012197 283593.38133482385 293005.7356367131 237011.4330329169 302315.2042473764 251813.47736828952 200072.22633510726 255922.46028434025 1.156769955883783 1.0831064824163492 0.9719482472341648 1.108122284459676 1.1449004331670296 0.926106418208029 1.1812765628756927 0.9839444224180813 0.7817689237311133 1.0 17.965347241270603 -7.5236447430636515 24.847068778292595 0.8882084633183159 1.0755748613035545 0.42326202935823554 0.08977393940907158 22.764855200504705 738260.7960051397 0.05607701253945419 0.02161186211310613 2.994713338380152e-08 7.5236447430636515 0.18736639798523858 DFDRVRVNGWAT(ph)LFLRT(ph)S(ph)IPT(ph)INMENK ddPTM_KYSE-520_SHP099_60min_R1 3 DFDRVRVNGWATLFLRTSIPTINMENK 27 3 P26006;P26006-1 P26006 ITGA3 Integrin alpha-3;Integrin alpha-3 heavy chain;Integrin alpha-3 light chain 4 DFDRVRVNGWAT(1)LFLRT(1)S(1)IPT(1)INMENK;DFDRVRVNGWAT(1)LFLRT(1)S(1)IPT(1)INMENK;DFDRVRVNGWAT(1)LFLRT(1)S(1)IPT(1)INMENK 86.785 0.0044245 10010700000.0 4519890.0 4297270.0 3981490.0 3615310.0 4083150.0 4087440.0 3936000.0 4072090.0 4973730.0 4184010.0 True False 4269162.691522667 4090822.6988662267 4238143.216009244 3958907.97541741 4404470.675054472 4061928.7708011186 4333889.291658202 4057964.8702229476 4070626.0095300376 4146942.926510521 1.029472256353185 0.9864670846358821 1.0219921737807625 0.9546569715510084 1.0621006252335017 0.9794995597441369 1.0450805252111315 0.9785436988489145 0.9815968248579922 1.0 21.983616761201073 DFDS(ph)S(ph)EDEKHSK ddPTM_KYSE-520_SHP099_60min_R1 5 DFDSSEDEKHSK 12 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1 P46100-2 ATRX Transcriptional regulator ATRX 2 DFDS(1)S(1)EDEKHSK;DFDS(1)S(1)EDEKHSK;DFDS(1)S(1)EDEKHSK;DFDS(1)S(1)EDEKHSK;DFDS(1)S(1)EDEKHSK 133.66 3.2035999999999996e-05 7620300000.0 16757000.0 15346200.0 13847800.0 14698600.0 14654000.0 14813600.0 14167800.0 15369600.0 18477900.0 14751600.0 True False 15827455.80574866 14608945.516884193 14740451.34526339 16095550.524704767 15807186.430145398 14721142.827574095 15600019.488403214 15316286.44489161 15122779.149952866 14620912.300571121 1.0825217661096571 0.9991815296172414 1.0081758950628272 1.1008581539796285 1.0811354384177476 1.0068552854255925 1.0669662171350174 1.0475602431657651 1.0343252759516341 1.0 23.801529998104236 DFDTALK ddPTM_KYSE-520_SHP099_60min_R1 2 DFDTALK 7 0 P31948;P31948-2;P31948-3 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ; 114.6 0.021074000000000002 616320000.0 1405270.0 1559240.0 1199390.0 967090.0 1485340.0 1680150.0 1121710.0 1395900.0 1501880.0 1455210.0 False True 1327316.8717637062 1484331.7699330435 1276704.5984918522 1059001.9428337894 1602227.8075714607 1669663.5606300014 1235103.3936346336 1391057.9487055107 1229176.4513137972 1442317.9715362496 0.9202664724131165 1.0291293592854869 0.8851755463686011 0.7342361141807167 1.110870029487941 1.157625151721295 0.8563322498984697 0.9644599707953854 0.8522229325095145 1.0 20.459957823631488 -3.9595273119133343 17.81409131083656 0.9537720422490958 0.7440321806871536 0.00708167597157916 0.12119161965535984 14878.243319763658 73128.665401611 0.030501823900812138 108754.24632644566 0.00010976722576851895 3.9595273119133343 -0.20973986156194224 DFDWNLK ddPTM_KYSE-520_SHP099_60min_R1 2 DFDWNLK 7 0 Q9Y5A9;Q9Y5A9-2;A0A024R7W5;A0A087X0Q1;A0A087WY31;Q7Z739 Q9Y5A9 YTHDF2;YTHDF3 YTH domain-containing family protein 2;YTH domain-containing family protein 3 0 ; 154.35 0.0091363 124733000.0 450320.0 461940.0 299850.0 252610.0 437790.0 460290.0 322260.0 332620.0 325650.0 393300.0 False True 425339.85190933564 439747.7090139243 319178.8107769627 276617.97845003434 472241.58231563814 457417.1593740939 354837.18575451465 331466.2188540913 266520.1689684517 389815.66798277013 1.0911307236838301 1.128091416359799 0.8187942070893631 0.7096122633589496 1.211448438589983 1.1734191233029447 0.9102691730959322 0.8503152799613537 0.683708200718684 1.0 18.5724325528899 -6.993894616976992 24.390234496884432 0.8362654488310386 1.0145468121669194 0.19709343355311204 0.16258917884945953 202.9930624595221 810927.0159257201 0.07384062401050513 0.049619732796135914 1.0141574446115524e-07 6.993894616976992 0.17828136333588085 DFEPYDFTLDD ddPTM_KYSE-520_SHP099_60min_R1 2 DFEPYDFTLDD 11 0 Q69YN2-2;Q69YN2-3;Q69YN2 Q69YN2-2 CWF19L1 CWF19-like protein 1 0 ; 144.09 0.0006058 131467000.0 266510.0 277570.0 769470.0 141708.0 404070.0 258910.0 275890.0 169334.0 644940.0 384290.0 False True 251726.15902548633 264235.1205589358 819071.26739553 155175.8857139361 435868.01015619305 257294.04665221175 303779.65362692566 168746.6198768526 527835.1536143505 380885.4895730962 0.660897214298255 0.6937390050093418 2.150439672337113 0.4074082367586652 1.1443544637122363 0.6755154861388705 0.7975616345148977 0.4430376701039125 1.3858106125438339 1.0 18.53899780166679 DFEQDILEDMYHAIK ddPTM_KYSE-520_SHP099_60min_R1 3 DFEQDILEDMYHAIK 15 0 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 0 ;; 127.75 0.00011149 38388000.0 125114.0 127474.0 80891.0 88485.0 125037.0 113832.0 93593.0 91946.0 108787.0 93822.0 False True 118173.67701142437 121349.95769762495 86105.36329017606 96894.58779601459 134876.70053678818 113121.53226416348 103054.29381965587 91627.06078635772 89034.0230971009 92990.81007241158 1.2708102759767659 1.3049672070082001 0.9259556210245523 1.0419802528934112 1.4504304288967933 1.2164807702618807 1.1082201965915546 0.9853345799978308 0.957449698822609 1.0 16.504800526758633 -7.093684474511475 2.886856520693255 0.9767570360643621 1.1969576743735018 0.35019666451398745 0.13438164795678803 0.3516859547209562 5.638735418094111 0.07923395742841548 0.04213303388520019 8.059637808022618e-08 7.093684474511475 0.2202006383091396 DFFHGLR ddPTM_KYSE-520_SHP099_60min_R1 2 DFFHGLR 7 0 Q9NTZ6 Q9NTZ6 RBM12 RNA-binding protein 12 0 ; 134.66 0.0031296999999999996 1454510000.0 2126680.0 1841490.0 1261280.0 1191950.0 1977260.0 1969420.0 1497510.0 1448100.0 1457990.0 1572770.0 False True 2008708.8209685227 1753022.0562671588 1342584.1269193543 1305232.569627164 2132859.1129295267 1957128.119260742 1648892.9250891947 1443076.879089081 1193255.768936933 1558836.4813965438 1.2885949520304678 1.124570843182119 0.861273227142175 0.837312049855172 1.3682378738138863 1.2555057202070183 1.057771578204258 0.9257397400632071 0.76547847267977 1.0 20.572038169681257 -7.258766918636012 3.4806016506761757 0.875764407848704 1.1113728608181652 0.26052880063205 0.1689002601874807 0.3668487136820376 9.552765503494479 0.10614908420895125 0.05097574832473186 5.511033885488818e-08 7.258766918636012 0.2356084529694612 DFGEEHPFYDR ddPTM_KYSE-520_SHP099_60min_R1 1 DFGEEHPFYDR 11 0 Q68CQ4 Q68CQ4 DIEXF Digestive organ expansion factor homolog 0 79.82 0.018325 189610000.0 176540.0 166210.0 115790.0 107140.0 172240.0 174620.0 123070.0 145300.0 129220.0 144370.0 False True 166746.97427623483 158225.02211370386 123254.00867055029 117322.55338718454 185794.3080884567 173530.13180799998 135511.11664745284 144795.98821327483 105756.90537111403 143090.99411816036 1.1653212370482244 1.1057650629154638 0.8613680366828029 0.8199157054587447 1.2984346725205722 1.2127257405501275 0.9470275713896552 1.0119154535589188 0.7390884801861329 1.0 17.126573348807963 -7.339242337715949 2.285830092822284 0.8810687135540447 1.0631144776457793 0.17664328452552003 0.1552922410403159 0.6048641477225918 5.941654975360077 0.12043120835578942 0.047221962490593 4.5788631338209845e-08 7.339242337715949 0.18204576409173456 DFGIVPPT(ph)SPAK ddPTM_KYSE-520_SHP099_60min_R1 1 DFGIVPPTSPAK 12 0 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 DFGIVPPT(0.5)S(0.5)PAK 82.54299999999999 0.03202 34421000.0 209760.0 221450.0 155350.0 123640.0 130720.0 194910.0 136800.0 181990.0 208200.0 224300.0 True False 198124.1946538068 210811.20959677311 165364.10956878844 135390.7084262786 141006.92030494128 193693.49439180634 150629.0790393396 181358.7191667853 170396.1282948919 222312.87650275938 0.8911953179254898 0.9482636044887688 0.7438350498187896 0.6090097458866631 0.6342723935884617 0.8712652970841398 0.6775544512261752 0.8157814428915199 0.766469900328859 1.0 17.76223198703326 -9.626065820587055 15.117264123678172 1.0 0.7697918704323858 0.29150004815983466 0.10602443478404897 0.0 0.0 0.11105846688913973 0.0269356346825344 2.3655611517759715e-10 9.626065820587055 -0.23020812956761416 DFGIVPPTS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 7 DFGIVPPTSPAK 12 0 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 DFGIVPPT(0.059)S(0.941)PAK;DFGIVPPT(0.005)S(0.995)PAK;DFGIVPPT(0.057)S(0.943)PAK;DFGIVPPT(0.003)S(0.997)PAK;DFGIVPPT(0.157)S(0.843)PAK;DFGIVPPT(0.206)S(0.794)PAK;DFGIVPPT(0.073)S(0.927)PAK 223.03 5.5506e-11 4571743000.0 12209480.0 12746630.0 8838410.0 6796880.0 7587470.0 11295520.0 8277270.0 10380670.0 12071300.0 11790540.0 True False 11532195.805405043 12134262.76171829 9408148.050556006 7442853.431643513 8184560.7222011415 11225020.46981961 9114017.229970437 10344661.878636591 9879456.212709574 11686084.988501307 0.9868314167449848 1.0383514045685938 0.8050727048291443 0.6368987936479169 0.7003680642622794 0.960545852684165 0.7799033841477541 0.8852119327230096 0.845403419744988 1.0 23.478288350823753 -4.764327976414395 24.99173849379459 0.8143978572447843 1.0125914500659452 0.3319000233451138 0.10435328329208382 74.35915451344758 643370.1212216999 0.027968274794621568 0.06263438936023415 1.720568721735797e-05 4.764327976414395 0.1981935928211609 DFHKDEVR ddPTM_KYSE-520_SHP099_60min_R1 3 DFHKDEVR 8 1 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 0 ;; 136.33 0.00069827 4088300000.0 4548900.0 4259300.0 3078980.0 2958840.0 4259000.0 4119100.0 3437500.0 4009200.0 3940500.0 3155600.0 False True 4296563.448992663 4054676.834660363 3277455.977342182 3240047.26399232 4594159.069604843 4093391.1689974396 3784996.0467670313 3995293.020954314 3225004.531921334 3127643.8390196473 1.373738082127475 1.2963997959343387 1.047899360040142 1.035938690835049 1.4688881810292285 1.308777910684518 1.2101748925329776 1.2774130388857285 1.0311290856353401 1.0 21.576644804176812 -7.789544202355393 7.3543256493758 1.0117513798259585 1.2475774484685551 0.3611933132319324 0.12587223660778243 0.24328356605164622 45.183585130914516 0.12289852027750078 0.03376732148399231 1.6235131014216725e-08 7.789544202355393 0.2358260686425966 DFHVHCYR ddPTM_KYSE-520_SHP099_60min_R1 2 DFHVHCYR 8 0 A0A087WZF1;Q93052 A0A087WZF1 LPP Lipoma-preferred partner 0 ; 141.52 0.0010119999999999999 2213050000.0 1135040.0 1213720.0 1052670.0 1057880.0 1441180.0 1229650.0 1139660.0 1057610.0 1168810.0 892500.0 False True 1072077.0685538566 1155411.0693691391 1120526.792531552 1158420.5971367806 1554592.666807489 1221975.2982344916 1254867.9548097525 1053941.3977580292 956583.5673023666 884593.1443544931 1.211943677605793 1.3061496991504131 1.266714307795393 1.309551859552456 1.7574098066766153 1.3813981105700222 1.4185820485025995 1.1914419690954232 1.0813825241664137 1.0 19.754654535750813 -7.560346681656996 2.1944006517481918 1.0225133525690586 1.3841070162389104 0.48599319410895514 0.14120522966021015 0.2981156344803949 2.6346284487188134 0.13189136053790365 0.04220587859414772 2.7520309789729163e-08 7.560346681656996 0.3615936636698518 DFIRS(ph)PEHRVMAT(ph)T(ph)ISK ddPTM_KYSE-520_SHP099_60min_R1 1 DFIRSPEHRVMATTISK 17 2 Q6ZN16-2;Q6ZN16-3;Q6ZN16 Q6ZN16-2 MAP3K15 Mitogen-activated protein kinase kinase kinase 15 3 DFIRS(1)PEHRVMAT(0.811)T(0.811)IS(0.378)K 54.402 0.066449 0.0 391970.0 378080.0 386390.0 342310.0 348210.0 337510.0 329530.0 338780.0 490610.0 365020.0 True False 370226.6427271771 359916.4692903502 411297.3176458589 374843.03948074585 375612.1459561165 335403.4748970219 362842.1083028774 337604.85125184676 401527.59127164725 361786.20678126306 1.0233298997797813 0.994831927099854 1.1368518476839844 1.0360899129230126 1.0382157719551002 0.9270764573393694 1.002918578712573 0.9331612010735489 1.109847704930365 1.0 18.46477788021907 -6.027742079550387 23.86829595457415 0.9900213125016887 1.048706284120621 0.16406452327154675 0.05770149520670581 689.0619024541567 592842.8335969045 0.01860775150199002 0.018658804204021325 9.381189751676752e-07 6.027742079550387 0.05868497161893227 DFKEERPEEYESWR ddPTM_KYSE-520_SHP099_60min_R1 2 DFKEERPEEYESWR 14 2 Q14241;A0A024RAC6 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 0 ; 107.07 0.00031657 907790000.0 819550.0 917850.0 691390.0 543570.0 781330.0 797080.0 650160.0 686040.0 801230.0 695410.0 False True 774087.9277675797 873755.1082790632 735958.1056631135 595230.7293697203 842816.2258404193 792105.1280581868 715884.5177501255 683660.2873629397 655746.8293646313 689249.2084207936 1.1230885988845287 1.2676911305868732 1.067767792362561 0.8635929096436857 1.222803327945023 1.1492289267521343 1.0386439462010535 0.9918912912926526 0.9513929379289054 1.0 19.394666179787183 -1.0000000000003006 0.17895981922188667 0.9650577812496297 1.8925792949452516 0.2134122588389623 0.10498780917521723 94.90932398454413 1.0638424314027914 0.25976362629939176 23.909911868018323 0.09999999999993077 1.0000000000003006 0.9275215136956219 DFLDEHYDIPK ddPTM_KYSE-520_SHP099_60min_R1 1 DFLDEHYDIPK 11 0 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 0 134.13 0.0002026 515970000.0 1074400.0 1028700.0 679020.0 593910.0 1134400.0 1099900.0 824390.0 854290.0 790520.0 911930.0 False True 1014800.8902366989 979279.70788982 722790.7156704138 650355.0278344468 1223670.8261469183 1093035.1161128113 907727.3864710617 851326.667382785 646981.4953875035 903851.009670805 1.1227523998742928 1.0834525794759993 0.799679048799939 0.7195378672767263 1.3538413002299972 1.2093089507206611 1.004288734270119 0.9418882739234312 0.7158054684512032 1.0 19.78572545357725 -7.404406299534628 3.4067380638614395 0.8519864228069128 1.0402372874159467 0.13786229507883418 0.18424652915565656 0.5345191295030229 11.306585028865642 0.12978503556421125 0.053917575466403724 3.940884443533991e-08 7.404406299534628 0.18825086460903384 DFLDGVYAFEYYPS(ph)TPGR ddPTM_KYSE-520_SHP099_60min_R1 4 DFLDGVYAFEYYPSTPGR 18 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 1 DFLDGVYAFEYYPS(0.5)T(0.5)PGR;DFLDGVYAFEYYPS(0.5)T(0.5)PGR;DFLDGVYAFEYYPS(0.5)T(0.5)PGR;DFLDGVYAFEYYPS(0.5)T(0.5)PGR 176.49 8.8048e-09 314477000.0 439841.0 491679.0 372923.0 388171.0 368330.0 468750.0 377379.0 459177.0 523635.0 455803.0 True False 415442.14292870474 468058.00281477475 396962.2132778969 425062.6551321331 397315.4754889767 465824.35737601644 415528.15218411596 457584.22215971793 428556.08376414905 451764.94002936804 0.919598016839682 1.0360653546606506 0.8786919437619295 0.9408934104193675 0.8794739039801279 1.0311210899759828 0.9197884018115783 1.0128812167893586 0.9486262562479721 1.0 18.785212786760507 -6.263925051688145 24.99991505526263 0.9793700292239741 0.9344343680085719 0.20428260041174107 0.05043856148352418 428.7714451556488 4312399.254002152 0.01687260474313823 0.015575301982073561 5.445966284232451e-07 6.263925051688145 -0.044935661215402156 DFLDGVYAFEYYPST(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 6 DFLDGVYAFEYYPSTPGR 18 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 1 DFLDGVYAFEYYPS(0.009)T(0.991)PGR;DFLDGVYAFEYYPS(0.149)T(0.851)PGR;DFLDGVYAFEYYPS(0.038)T(0.962)PGR;DFLDGVYAFEYYPS(0.161)T(0.839)PGR;DFLDGVYAFEYYPS(0.186)T(0.814)PGR;DFLDGVYAFEYYPS(0.023)T(0.977)PGR 286.16 4.0074e-37 978258000.0 1284368.0 1331050.0 1026566.0 1074187.0 1014261.0 1249249.0 1008054.0 1295840.0 1457650.0 1364355.0 True False 1213121.5467158689 1267104.3600532184 1092740.0869236742 1176277.4095139029 1094077.5703443242 1241451.973605611 1109957.9359789656 1291345.0334913284 1192977.5043662314 1352267.8761521275 0.8971015048939868 0.9370217117474967 0.8080796018264232 0.8698553224979323 0.8090686687444778 0.9180518117003247 0.8208121745355264 0.9549476522106294 0.8822050167758505 1.0 20.36694953848544 -8.265736530329496 0.7951909564767968 0.9990570101882723 0.8670443353741266 0.38438675656245436 0.04829026888375968 1.0351528010882096 1.3132715625000897 0.046616629006849146 0.016533813063548865 5.423298011444045e-09 8.265736530329496 -0.1320126748141457 DFLLKPELLR ddPTM_KYSE-520_SHP099_60min_R1 4 DFLLKPELLR 10 1 Q13838-2;Q13838;Q5STU3;F6WLT2;F6TRA5;F6S4E6;A0A0A0MT12;F6R6M7;A0A0G2JJL7;F6QYI9;K7ENP6;F6SXL5;F6S2B7;K7EN69;F6U6E2;K7EIL8;K7EL56;A0A0G2JHN7;O00148;K7EQN7;O00148-3;O00148-2;K7EPJ3 Q13838-2;O00148 DDX39B;DDX39A Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A 0 ;;; 105.2 0.0014807 5042490000.0 5074050.0 3960290.0 3415770.0 2871620.0 5644560.0 4503230.0 3617370.0 3867400.0 3554870.0 3393490.0 False True 4792582.331632096 3770031.7238835185 3635955.99962524 3144537.901415964 6088754.758846832 4475123.671181644 3983049.0617290633 3853984.892057949 2909395.2189801303 3363426.3186952667 1.4249107539514125 1.1208902371156986 1.081027397393885 0.9349210012234745 1.810283378292874 1.3305252582187157 1.1842236708411555 1.1458508457985126 0.8650093515676409 1.0 21.681500223266514 -7.502078840861632 2.3491198117729994 0.9354365454075635 1.2688897900787723 0.2559495054308244 0.22577609041052024 0.4761305639395506 4.8872169054709955 0.19463373687207097 0.06590899377632907 3.147176930685771e-08 7.502078840861632 0.33345324467120885 DFLSNEASLGAIGTS(ph)LPSR ddPTM_KYSE-520_SHP099_60min_R1 4 DFLSNEASLGAIGTSLPSR 19 0 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 DFLSNEASLGAIGT(0.221)S(0.776)LPS(0.004)R;DFLSNEASLGAIGT(0.04)S(0.959)LPS(0.001)R;DFLSNEASLGAIGT(0.002)S(0.998)LPSR;DFLSNEASLGAIGT(0.021)S(0.979)LPSR 289.78 1.0576999999999998e-43 3451560000.0 3483010.0 3994310.0 3202990.0 3185310.0 3701150.0 4436220.0 3752330.0 4631920.0 4848170.0 4922250.0 True False 3289800.4920917004 3802417.3520184574 3409459.8603651994 3488040.904701631 3992409.44833716 4408531.905447747 4131652.1356117427 4615852.950618251 3967864.540420013 4878642.694452555 0.6743269999732697 0.7794006632914806 0.698854184226702 0.7149613372317345 0.8183443015568408 0.903639020430956 0.84688557748035 0.9461346607462935 0.8133132079813559 1.0 22.21804839531868 -5.967433722968571 2.6417220009063396 0.8953759905658493 0.7191506737428974 0.7221094255499612 0.05392764374022245 0.1481155751640249 2.096657512658207 0.017331376306274262 0.01926413159343818 1.0778697332316312e-06 5.967433722968571 -0.17622531682295184 DFMHVLEHECQHHHSK ddPTM_KYSE-520_SHP099_60min_R1 1 DFMHVLEHECQHHHSK 16 0 O75400-3;O75400;O75400-2 O75400-3 PRPF40A Pre-mRNA-processing factor 40 homolog A 0 214.22 3.1517999999999997e-18 1396400000.0 1899600.0 1721700.0 1246600.0 1073500.0 1125400.0 1506400.0 1191500.0 1539400.0 1418000.0 1111100.0 False True 1794225.4012412843 1638986.947675613 1326957.8306305215 1175525.1172404573 1213962.577349916 1496997.9988292914 1311948.447919397 1534060.1806986597 1160526.9448710699 1101256.5184227207 1.629252922662443 1.488288078442486 1.2049489001264324 1.067439872159947 1.1023431480692791 1.3593544953299102 1.1913195753868868 1.3930089448149863 1.053820727012122 1.0 20.070719127918945 -4.666257082058822 3.144019879288429 1.1847723059045954 1.6064372568959224 0.6277428367673725 0.12119983374511444 0.1611515252016881 3.0577918597967826 0.032107942298141165 0.10588510547816025 2.1564675031655524e-05 4.666257082058822 0.42166495099132706 DFNVGDYIQAVLDR ddPTM_KYSE-520_SHP099_60min_R1 2 DFNVGDYIQAVLDR 14 0 E9PK47;P06737-2;P06737 E9PK47 PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form 0 ; 115.06 0.0010515999999999998 104189000.0 92779.0 119403.0 128208.0 88485.0 117456.0 87071.0 98508.0 112490.0 124450.0 89010.0 False True 87632.3639196489 113666.70065244297 136472.492820053 96894.58779601459 126699.1189667777 86527.55759165244 108466.14998543335 112099.79844536347 101853.01712919933 88221.44064873212 0.9933227487019994 1.2884248978094255 1.5469311294001673 1.0983111031003903 1.4361488322464677 0.9807996441157184 1.2294760682645027 1.2706638842104934 1.1545154599633385 1.0 16.42884169926105 -6.258046229071389 24.986464635620365 1.150406574272341 1.2790601719374335 0.15024035307398564 0.16821262074369664 669.3377736410051 4928870.950379222 0.05623959191587187 0.05406784065504691 5.52018675768669e-07 6.258046229071389 0.12865359766509243 DFQDYMEPEEGCQGS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 10 DFQDYMEPEEGCQGSPQR 18 0 O43237;O43237-2;B4E2E0;H3BUM4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR;DFQDYMEPEEGCQGS(1)PQR 355.04 2.4240999999999997e-62 15627210000.0 8985940.0 8374850.0 7234140.0 7320570.0 7801050.0 8338280.0 7948800.0 8841180.0 9874110.0 8633060.0 True False 8487471.995172724 7972509.635093875 7700464.239433239 8016314.771790366 8414948.253097165 8286237.701592083 8752342.27681216 8810512.010126932 8081220.53005705 8556577.804819046 0.9919236625643255 0.9317404477528125 0.8999467328043642 0.9368599169723666 0.9834478742608856 0.9684055811337673 1.022878828014964 1.0296770754734295 0.9444453979610545 1.0 23.02860247679219 -5.95350446442282 2.0962415579882996 0.9974886998251118 0.93653614340311 0.3854997596691311 0.03139071238853451 0.31927878682040906 2.8438023331955367 0.011560339137035313 0.013070622322490094 1.1130009514121522e-06 5.95350446442282 -0.06095255642200181 DFQDYMEPEEGCQGS(ph)PQRR ddPTM_KYSE-520_SHP099_60min_R1 10 DFQDYMEPEEGCQGSPQRR 19 1 O43237;O43237-2;B4E2E0;H3BUM4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR;DFQDYMEPEEGCQGS(1)PQRR 212.94 9.8681e-19 34232710000.0 11601180.0 11564000.0 11298080.0 9757327.0 10269450.0 10398930.0 9710180.0 9881210.0 13442670.0 9692570.0 True False 10957639.419021029 11008448.082082113 12026372.314367162 10684660.424432665 11077597.289822353 10334026.420582775 10691779.756624388 9846934.388801757 11001819.990134003 9606701.37050535 1.1406245490947966 1.1459134262131254 1.251873234166592 1.1122090728495926 1.1531114440418615 1.075710175847713 1.112950152635166 1.0250068164951993 1.1452234815908786 1.0 23.19560971069272 -6.210439210954071 1.0743711029788248 1.0660235722335871 1.173035310987674 0.4459209789114553 0.0502520715726581 0.4729353160166681 1.1458054051604967 0.025674538659278535 0.024370367213307827 6.159717418479675e-07 6.210439210954071 0.10701173875408698 DFQEYVEPGEDFPAS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 10 DFQEYVEPGEDFPASPQR 18 0 Q9Y6G9;E9PHI6;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR;DFQEYVEPGEDFPAS(1)PQR 329.63 6.5861e-49 9448870000.0 7225920.0 6841020.0 6087990.0 5596110.0 5921040.0 7113220.0 6591610.0 7521050.0 7793870.0 7254480.0 True False 6825083.813085604 6512367.130619634 6480431.576528411 6127962.6118681785 6386992.161890831 7068823.75546502 7257954.2667142 7494961.23297627 6378699.67547411 7190210.951100041 0.9492188559560167 0.9057268520923294 0.901285319805111 0.8522646489155721 0.8882899549579523 0.9831177142839669 1.0094216033541819 1.0423840529782515 0.8871366527150671 1.0 22.77760266733804 -6.277205982870193 9.07395837873962 0.9887037065047649 0.8971854400581014 0.49033786574644656 0.043219280119349564 0.22548092268972386 118.99224751983054 0.015073779736163435 0.013651767660656627 5.281946732742886e-07 6.277205982870193 -0.0915182664466635 DFQEYVEPGEDFPAS(ph)PQRR ddPTM_KYSE-520_SHP099_60min_R1 19 DFQEYVEPGEDFPASPQRR 19 1 Q9Y6G9;E9PHI6;C9JGM7 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR;DFQEYVEPGEDFPAS(1)PQRR 267.25 2.0179999999999997e-35 53325220000.0 9522060.0 9334680.0 8889460.0 7859290.0 8449050.0 8539820.0 7802180.0 8233520.0 10760990.0 8384210.0 True False 8993852.350044 8886227.961159656 9462488.815238882 8606234.558618294 9113942.166481506 8486519.815694612 8590900.496338865 8204959.840838016 8807065.478482485 8309932.4222166855 1.0823015029579361 1.0693502076385408 1.1386962413726525 1.0356563833912105 1.096752861926445 1.021250159989968 1.0338111142000395 0.9873678176854935 1.059823958969475 1.0 22.986405314126138 -6.269270440461764 23.9577536321923 1.02049612301574 1.0839985794236309 0.5343284947278018 0.02991829061789217 267.5097920896742 818397.2866036457 0.009958624938557077 0.008947150365449463 5.379346997097502e-07 6.269270440461764 0.06350245640789076 DFQHLIS(ph)SPLKK ddPTM_KYSE-520_SHP099_60min_R1 2 DFQHLISSPLKK 12 1 Q15361 Q15361 TTF1 Transcription termination factor 1 1 DFQHLIS(0.797)S(0.203)PLKK;DFQHLIS(0.629)S(0.371)PLKK 147.92 1.4686e-05 5273520000.0 2277300.0 2195300.0 2155500.0 2294000.0 2337900.0 2097580.0 2231800.0 2132500.0 2508700.0 2122200.0 True False 2150973.629315 2089834.492787518 2294446.9789219424 2512021.070283749 2521879.42916862 2084488.2251622053 2457412.124268992 2125102.855229244 2053183.3191805757 2103398.9590466134 1.0226179964879085 0.9935511681220743 1.0908282373411098 1.1942675256539765 1.1989543963222684 0.9910094403141763 1.1683052868785475 1.0103184876503257 0.9761264311508462 1.0 21.00429108636906 -9.670190573143573 6.9828769599577125 0.9999999997228873 1.0760344544720941 0.06087708051763452 0.08307069201143158 6.548630062042136e-11 0.0 0.0849953904484421 0.02061441014762008 2.1370241342848913e-10 9.670190573143573 0.07603445474920678 DFQHLISS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 2 DFQHLISSPLK 11 0 Q15361 Q15361 TTF1 Transcription termination factor 1 1 DFQHLIS(0.011)S(0.989)PLK;DFQHLIS(0.04)S(0.96)PLK 109.1 0.0036063000000000002 25080000.0 155066.0 144535.0 127004.0 152305.0 141642.0 158572.0 132363.0 153601.0 152063.0 143029.0 True False 146464.17986359278 137591.32164854187 135190.88105358472 166780.02140783187 152788.41956726176 157582.29332870338 145743.5437783929 153068.19398174284 124452.19239628318 141761.87433487806 1.0331704525689798 0.9705805760123891 0.9536476692896219 1.1764800810537712 1.077782163110627 1.1115985455754727 1.0280870259524724 1.0797557149968005 0.8778960702952829 1.0 17.113110058468884 -7.7504811224020695 24.975847547607103 0.9389480206010747 1.053716099456727 0.318937049239288 0.06718444323625872 230.55710812564425 525489.2988843552 0.04865663992843443 0.017999296507639068 1.7763104779874516e-08 7.7504811224020695 0.11476807885565221 DFQHLISS(ph)PLKK ddPTM_KYSE-520_SHP099_60min_R1 1 DFQHLISSPLKK 12 1 Q15361 Q15361 TTF1 Transcription termination factor 1 1 DFQHLIS(0.084)S(0.916)PLKK 165.45 1.9326e-06 4504800000.0 1256300.0 975910.0 825850.0 976440.0 1127600.0 983710.0 1059900.0 944070.0 1185800.0 924600.0 True False 1186610.5346280392 929025.8187292265 879085.6124067188 1069240.5640226095 1216335.7048336267 977570.3010013036 1167045.0356271656 940795.2415175933 970488.6115854133 916408.7633279158 1.2948485240569856 1.0137679340335988 0.9592723766786571 1.1667725220563026 1.3272851084668087 1.0667404548285648 1.2734983364727661 1.0266109177100387 1.059012801297434 1.0 19.80563172918293 -7.38398802962421 22.549663376191504 1.0320895889521953 1.147888773686828 0.206058512548163 0.11482583589484015 15.03111492525087 2715.2798057742552 0.06509881955731744 0.03127244283815212 4.1305888689640445e-08 7.38398802962421 0.11579918473463269 DFS(ph)PEALKK ddPTM_KYSE-520_SHP099_60min_R1 5 DFSPEALKK 9 1 E5RGU4;A0A087WZK9;B3KS98;O15372;E5RJT0 E5RGU4 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 DFS(1)PEALKK;DFS(1)PEALKK;DFS(1)PEALKK;DFS(1)PEALKK;DFS(1)PEALKK 131.17 0.00036462 6237490000.0 7784470.0 6854420.0 6508660.0 6670000.0 7071500.0 6393070.0 6764140.0 6722250.0 7926730.0 6467420.0 True False 7352649.931143781 6525123.374505818 6928218.637824203 7303914.794591381 7627986.818668856 6353168.478741092 7447925.282844727 6698932.083734943 6487435.648602166 6410123.690376623 1.1470371378608735 1.017940322165989 1.0808244852163125 1.139434299147236 1.1899905816358247 0.9911148030230623 1.1619004004596873 1.0450550421970644 1.0120609151960063 1.0 22.611920764822056 -7.493142136569046 6.677867528687154 1.0127003270050896 1.100525460197065 0.31501441172000655 0.05898927263831878 0.23067584558370985 37.23044621225453 0.03421649702966357 0.015307872417295183 3.212608938947926e-08 7.493142136569046 0.08782513319197549 DFS(ph)PVPWSQYFESMEDVEVENETGK ddPTM_KYSE-520_SHP099_60min_R1 5 DFSPVPWSQYFESMEDVEVENETGK 25 0 Q9Y570;Q9Y570-4 Q9Y570 PPME1 Protein phosphatase methylesterase 1 1 DFS(0.979)PVPWS(0.021)QY(0.001)FESMEDVEVENETGK;DFS(1)PVPWSQYFESMEDVEVENETGK;DFS(0.997)PVPWS(0.003)QYFESMEDVEVENETGK;DFS(0.998)PVPWS(0.002)QYFESMEDVEVENETGK;DFS(0.983)PVPWS(0.015)QY(0.002)FESMEDVEVENETGK 261.86 6.9767e-38 200662000.0 315567.0 289578.0 241772.0 298583.0 258615.0 290514.0 294851.0 335748.0 355597.0 312650.0 True False 298061.86944278126 275666.23821456026 257357.00996887748 326960.23854774726 278966.52918193385 288700.79436530324 324657.41654845304 334583.36855217227 291029.5486708876 309880.1642380191 0.9618617254050498 0.8895898157676879 0.8305049489105132 1.0551183208248494 0.9002400326845688 0.9316530313426323 1.0476869900555608 1.0797185724194294 0.9391680470626951 1.0 18.24135088385812 -6.749403584541672 22.776680797759255 1.023286599586113 0.926470688562153 0.314753441541039 0.06362814648174492 86.57835932977792 163842.03836872012 0.02449510318084261 0.018787400273551406 1.7807231940658534e-07 6.749403584541672 -0.09681591102395992 DFSSMKK ddPTM_KYSE-520_SHP099_60min_R1 1 DFSSMKK 7 1 H7C422;P39023;H7C3M2;B5MCW2;G5E9G0 H7C422 RPL3 60S ribosomal protein L3 0 72.485 0.06124299999999999 291580000.0 424500.0 516750.0 348830.0 270790.0 412800.0 385800.0 253930.0 306920.0 432800.0 310260.0 False True 400952.1387802302 491924.5543424366 371316.1399477338 296525.8001840177 445285.0114892876 383392.0790947559 279599.7225179794 305855.3661556662 354214.43000014103 307511.3377786277 1.3038613199649536 1.599695666169437 1.2074876413663749 0.9642759916627259 1.4480279481917537 1.2467575402723965 0.9092338660997877 0.994614924981551 1.1518743749706364 1.0 18.230280077264172 -4.9641027748499384 0.3645959498523101 0.994635675348434 1.6216190720057284 0.3657644372459091 0.1700398493709083 4.237427586262113 0.6561200852902859 0.17654560285514923 1.1188825918000018 1.0861685537614497e-05 4.9641027748499384 0.6269833966572944 DFSYNYFGFK ddPTM_KYSE-520_SHP099_60min_R1 1 DFSYNYFGFK 10 0 P23921 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit 0 132.91 0.0023856 122440000.0 153000.0 176970.0 127940.0 112200.0 162470.0 165850.0 123910.0 120020.0 139940.0 104630.0 False True 144512.78500206172 168468.0955626143 136187.21711123775 122863.45426583987 175255.4646721527 164814.86863106617 136436.03204506275 119603.67863287854 114530.42360032281 103703.05960090828 1.393524796261614 1.6245238685430143 1.313242035821718 1.1847620961104581 1.6899739057517424 1.5892961043323224 1.3156413375856442 1.1533283501293243 1.1044073727533466 1.0 16.662098933736857 -7.207194414156334 2.378163196423387 1.0725774760937905 1.4627366618436493 0.5797574347301755 0.14491347459916834 0.24596290271584825 2.6749990010332563 0.09831404234065183 0.04462903087093593 6.205911612169961e-08 7.207194414156334 0.39015918574985875 DFTEVLS(ph)PNMYNSK ddPTM_KYSE-520_SHP099_60min_R1 2 DFTEVLSPNMYNSK 14 0 B7ZLP8;A2RTX5-2;A2RTX5 B7ZLP8 TARSL2 Probable threonine--tRNA ligase 2, cytoplasmic 1 DFTEVLS(1)PNMYNSK;DFTEVLS(1)PNMYNSK 271.19 5.9616e-25 1014370000.0 1385670.0 1447120.0 1097620.0 958380.0 1050650.0 1332330.0 1162840.0 1238350.0 1491880.0 1487500.0 True False 1308804.1228353363 1377598.1830285944 1168374.3414540943 1049464.1470525465 1133330.1776192351 1324014.43426728 1280391.215424749 1234054.452883062 1220992.1992343108 1474321.9072574899 0.8877329410847274 0.9343944332965795 0.7924825207457479 0.7118283611512922 0.7687128381124295 0.8980497595197445 0.868461093280851 0.8370318902597266 0.8281720519947919 1.0 20.49162012991702 -6.279111804293406 24.498719975393087 0.8750398358489884 0.8180088062970802 0.16884084032136015 0.07252035271694589 1540.3362614383925 2135312.579923592 0.027824757096677342 0.024599589862773663 5.258818665139632e-07 6.279111804293406 -0.0570310295519082 DFTNEAPPAPLPDAS(ph)ASPLS(ph)PHRR ddPTM_KYSE-520_SHP099_60min_R1 1 DFTNEAPPAPLPDASASPLSPHRR 24 1 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 2 DFTNEAPPAPLPDAS(0.557)AS(0.557)PLS(0.886)PHRR 54.841 0.040193 718200000.0 619340.0 810560.0 686770.0 595630.0 682770.0 854080.0 704540.0 941890.0 1049500.0 1041700.0 True False 584983.9755763185 771619.4809246354 731040.2930708511 652238.4961173106 736500.114570109 848749.3699151101 775761.7788477814 938622.8034287789 858937.2557420224 1032471.3484303361 0.566586158991887 0.7473519551876445 0.7080489876859538 0.6317255167505688 0.713337097140573 0.8220560998670441 0.7513639773415216 0.909103003057436 0.8319235754559803 1.0 19.97767031605267 -7.174272141479601 0.34504444883909574 1.015757887534764 0.6185657745720919 0.7793555045537992 0.056983584829758335 0.6132859803528532 0.2191971567440431 0.07967385517296446 0.08269064094762256 6.69464971843396e-08 7.174272141479601 -0.397192112962672 DFTNEAPPAPLPDAS(ph)ASPLSPHRR ddPTM_KYSE-520_SHP099_60min_R1 5 DFTNEAPPAPLPDASASPLSPHRR 24 1 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDAS(0.333)AS(0.333)PLS(0.333)PHRR;DFTNEAPPAPLPDAS(0.389)AS(0.269)PLS(0.342)PHRR;DFTNEAPPAPLPDAS(0.333)AS(0.333)PLS(0.333)PHRR;DFTNEAPPAPLPDAS(0.333)AS(0.333)PLS(0.333)PHRR;DFTNEAPPAPLPDAS(0.362)AS(0.362)PLS(0.275)PHRR 153.81 2.2248000000000002e-07 35769510000.0 2967860.0 3132480.0 2572840.0 2333080.0 2226200.0 2840530.0 2327030.0 2593830.0 3731350.0 2106570.0 True False 2803226.889517767 2981990.9588516643 2738689.383089551 2554815.2217339193 2401389.2746546827 2822801.198628894 2562268.9020242286 2584832.609134473 3053830.899678897 2087907.428686662 1.342601137868002 1.4282199095040338 1.3116910000230442 1.223624757799225 1.1501416402187943 1.351976222626161 1.2271946863257006 1.238001538583723 1.462627536892199 1.0 20.993626318044576 -10.745848234564235 2.8469116173264943 0.9436793244945015 1.2982083837392129 0.4932800396389174 0.09226831681742252 33083637.137137424 27435951.20534034 13122655.515325429 0.024594685071855853 1.7953609111743227e-11 10.745848234564235 0.35452905924471134 DFTNEAPPAPLPDASAS(ph)PLS(ph)PHRR ddPTM_KYSE-520_SHP099_60min_R1 1 DFTNEAPPAPLPDASASPLSPHRR 24 1 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 2 DFTNEAPPAPLPDAS(0.039)AS(0.961)PLS(1)PHRR 92.238 0.0025214 600880000.0 296590.0 307720.0 265530.0 274470.0 318310.0 243950.0 241100.0 266180.0 345280.0 268250.0 True False 280137.56146249286 292936.6693028632 282646.48866302153 300555.54627758515 343359.1860638447 242427.41756134244 265472.740909246 265256.68370687886 282585.8558004821 265873.51369534165 1.0536497508491802 1.1017895887084586 1.0630862951880933 1.1304456096442341 1.291438102620828 0.9118148483159344 0.9984926186120407 0.9976799870739678 1.0628582436545022 1.0 18.02038053759087 -6.289358224974571 24.999753105912358 0.9942943656756512 1.123141700838471 0.4779522085156146 0.06988152335119276 716.0896820372473 641215.7564319635 0.02551261674129139 0.022504160329516833 5.136198208457414e-07 6.289358224974571 0.12884733516281976 DFTNEAPPAPLPDASASPLS(ph)PHR ddPTM_KYSE-520_SHP099_60min_R1 3 DFTNEAPPAPLPDASASPLSPHR 23 0 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDASAS(0.002)PLS(0.998)PHR;DFTNEAPPAPLPDASAS(0.038)PLS(0.962)PHR;DFTNEAPPAPLPDAS(0.008)AS(0.061)PLS(0.931)PHR 181.64 4.373600000000001e-15 15258900000.0 10197700.0 11440700.0 8668830.0 8439920.0 8494040.0 10640870.0 8627090.0 11557000.0 12219700.0 11723100.0 True False 9632013.25238903 10891071.599159192 9227636.652418418 9242047.45924553 9162472.62352342 10574456.383299679 9499200.449484622 11516911.464424076 10000910.513569137 11619242.454433782 0.8289708464353074 0.937330608417012 0.7941685259263394 0.7954087794870708 0.7885602404334988 0.9100813951312786 0.8175404280216071 0.9911929723120066 0.8607196684972258 1.0 23.470012675909377 -7.596398416563444 0.7682757838497775 0.9859135523159916 0.8340646188991798 0.3921365407937676 0.06046151132328392 0.63291449340488 0.7765800852075692 0.05683231133405596 0.023474451835447923 2.532804000269983e-08 7.596398416563444 -0.15184893341681183 DFTNEAPPAPLPDASASPLS(ph)PHRR ddPTM_KYSE-520_SHP099_60min_R1 7 DFTNEAPPAPLPDASASPLSPHRR 24 1 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 DFTNEAPPAPLPDASAS(0.001)PLS(0.999)PHRR;DFTNEAPPAPLPDAS(0.01)AS(0.092)PLS(0.898)PHRR;DFTNEAPPAPLPDAS(0.199)AS(0.199)PLS(0.602)PHRR;DFTNEAPPAPLPDAS(0.284)AS(0.284)PLS(0.432)PHRR;DFTNEAPPAPLPDAS(0.027)AS(0.097)PLS(0.876)PHRR;DFTNEAPPAPLPDAS(0.115)AS(0.115)PLS(0.77)PHRR;DFTNEAPPAPLPDAS(0.025)AS(0.025)PLS(0.951)PHRR 141.08 7.6829e-08 49782300000.0 5837710.0 6011720.0 4841260.0 5662650.0 4966460.0 5472880.0 4631610.0 4989510.0 6702710.0 4970230.0 True False 5513880.589113626 5722907.947424312 5153335.365889881 6200826.553462191 5357292.14670807 5438721.725858242 5099818.3389575705 4972202.554370394 5485666.8255689535 4926197.628980423 1.119297479393825 1.1617292643228332 1.046108125174115 1.2587449835514573 1.0875106015218619 1.1040405065892365 1.0352443655438732 1.0093388306468518 1.113570189165213 1.0 22.232043076298428 -6.476122021627389 2.018853327502003 1.0405392120814496 1.1395475621381261 0.3699776896631648 0.05867311132477304 0.35983367114698533 2.9254947886388702 0.024805091957963356 0.019630949145098817 3.3410115604613743e-07 6.476122021627389 0.09900835005667652 DFWGDDYKNHVK ddPTM_KYSE-520_SHP099_60min_R1 2 DFWGDDYKNHVK 12 1 Q9NX58;D6RDJ1 Q9NX58 LYAR Cell growth-regulating nucleolar protein 0 ; 196.38 5.4039e-08 1064810000.0 2223960.0 2241830.0 1715170.0 1552490.0 2184430.0 2181280.0 1631220.0 1671690.0 1880080.0 1776490.0 False True 2100592.505445653 2134129.121744566 1825732.6025690322 1700038.1828268622 2356332.213293472 2167665.822415266 1796119.6367730417 1665891.297565381 1538704.8649599445 1760751.680688308 1.1930089452616597 1.2120557061801573 1.036905216444446 0.9655184211792364 1.3382535647345464 1.231102515016705 1.0200868506744276 0.9461250645600153 0.8738908966189022 1.0 20.747760029146146 -6.9627949554823285 4.292713013319745 0.939010086054141 1.157864728278901 0.5016261215244704 0.10109332430516196 0.19258127817392506 7.929274610805896 0.049674748075742195 0.031498189165701636 1.0894443339513385e-07 6.9627949554823285 0.21885464222475992 DFYLAT(ph)SPPDSFLDDHHLTRPHPER ddPTM_KYSE-520_SHP099_60min_R1 1 DFYLATSPPDSFLDDHHLTRPHPER 25 1 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 DFYLAT(0.572)S(0.427)PPDS(0.001)FLDDHHLTRPHPER 67.78 0.045558999999999995 492910000.0 118560.0 171880.0 171290.0 371220.0 130260.0 120790.0 132070.0 112660.0 186000.0 118470.0 True False 111983.24045649945 163622.62680286006 182331.62747369014 406500.6371886371 140510.7209219833 120036.1048052244 145420.92447898834 112269.20875504175 152227.08867843403 117420.44796826532 0.9536945429365475 1.393476431354457 1.5528098438439621 3.461923746863069 1.1966460983010259 1.022275990955732 1.2384633766538735 0.9561299645644703 1.296427422245704 1.0 16.84132414024113 -5.965056759503896 24.999976949934172 1.108519335834707 1.855660344245155 0.24901227116682112 0.6159211480039251 269.431820280872 192762.6466559972 0.2002997596250919 0.22711778235054397 1.0837852609809347e-06 5.965056759503896 0.747141008410448 DFYLATS(ph)PPDSFLDDHHLTR ddPTM_KYSE-520_SHP099_60min_R1 4 DFYLATSPPDSFLDDHHLTR 20 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 DFYLAT(0.006)S(0.994)PPDSFLDDHHLTR;DFYLAT(0.008)S(0.992)PPDSFLDDHHLTR;DFYLAT(0.006)S(0.994)PPDSFLDDHHLTR;DFYLAT(0.005)S(0.995)PPDSFLDDHHLTR 146.5 2.5495e-06 782703000.0 278573.0 340538.0 317903.0 624268.0 331289.0 345902.0 364854.0 313190.0 329127.0 355638.0 True False 263120.00036849204 324178.043322041 338395.5360427843 683598.243026981 357359.5595234372 343743.09731216764 401737.002951895 312103.61698909587 269365.83341648884 352487.32400217763 0.746466560502092 0.919687095811815 0.9600218589440501 1.9393555355844734 1.0138224418000048 0.9751927910747906 1.1397204256610747 0.8854321722705912 0.7641858730069531 1.0 18.427211851301383 -7.285568566162033 7.494575112661958 0.8674135719829505 1.1112430713652535 0.09323405886993363 0.30589866560970747 0.5452932150101234 134.2150357376522 0.17416746324491497 0.08572807628569129 5.181212848602835e-08 7.285568566162033 0.24382949938230292 DFYLATS(ph)PPDSFLDDHHLTRPHPER ddPTM_KYSE-520_SHP099_60min_R1 7 DFYLATSPPDSFLDDHHLTRPHPER 25 1 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 DFYLAT(0.006)S(0.994)PPDSFLDDHHLTRPHPER;DFYLAT(0.044)S(0.956)PPDSFLDDHHLTRPHPER;DFYLAT(0.043)S(0.957)PPDSFLDDHHLTRPHPER;DFYLAT(0.002)S(0.998)PPDSFLDDHHLTRPHPER;DFYLAT(0.038)S(0.961)PPDSFLDDHHLTRPHPER;DFYLAT(0.003)S(0.997)PPDSFLDDHHLTRPHPER;DFYLAT(0.024)S(0.976)PPDSFLDDHHLTRPHPER 138.34 1.1755e-06 21202500000.0 1898686.0 3195860.0 3260690.0 6657670.0 2398520.0 2331173.0 2509280.0 2303151.0 3077470.0 1975600.0 True False 1793362.102643297 3042326.0885163387 3470879.294688461 7290412.955098524 2587269.8782880013 2316623.284602283 2762942.510612825 2295161.906740484 2518679.024705483 1958097.7209935407 0.9158695622879043 1.553715147052344 1.7725771586758874 3.7232120118087675 1.3213180581075483 1.1830989126665374 1.4110340260295615 1.1721385925396595 1.2862887269117003 1.0 20.90102133532543 -5.9635951368005635 24.999900376858033 1.2358442968870067 2.016683672176939 0.23745691831086713 0.6703474943821317 269.5346869919306 185093.40706431965 0.21871689716541398 0.24800101817537598 1.0874388965432804e-06 5.9635951368005635 0.7808393752899323 DGADFAK ddPTM_KYSE-520_SHP099_60min_R1 10 DGADFAK 7 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8;H3BU78;P09972;J3KSV6;K7EKH5;A8MVZ9;C9J8F3;J3QKP5 P04075 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C 0 ;;;;;;;;; 145.04 0.011405 8997440000.0 8847240.0 10867850.0 8450010.0 6132850.0 9881950.0 10883950.0 8015090.0 9421330.0 10076040.0 9866820.0 False True 8356465.960664306 10345742.173024572 8994711.165094033 6715714.220091411 10659603.244395768 10816019.230853735 8825333.51694021 9388649.605184957 8246485.132298108 9779407.6510698 0.8544961268436505 1.0579109228453953 0.9197603255765776 0.6867199384368396 1.0900050007864925 1.1059994241747901 0.9024404986302805 0.9600427694777509 0.843249962219951 1.0 23.22131565160343 DGADFAKWR ddPTM_KYSE-520_SHP099_60min_R1 3 DGADFAKWR 9 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8;H3BU78;P09972;J3KSV6;K7EKH5;A8MVZ9;C9J8F3;J3QKP5 P04075 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C 0 ;; 117.3 0.00089351 1773900000.0 4206340.0 3164060.0 2970410.0 2275693.0 3191820.0 2828870.0 2837580.0 2883040.0 3384910.0 3532200.0 False True 3973005.935069098 3012053.8082491145 3161887.381424043 2491974.17850795 3442998.075028434 2811213.9730139547 3124430.27851206 2873039.407146591 2770295.6706371894 3500907.4560100157 1.1348503166653634 0.860363733145335 0.9031622289803816 0.7118080697134603 0.9834587512782811 0.802995797043403 0.8924629736065556 0.8206556280756402 0.7913078838691998 1.0 21.739297494980892 -4.26055382797196 6.455390815465093 0.856301523227925 1.140659255184105 0.4876121278411397 0.0833897541890549 0.09485396746274785 23.452602128886763 0.019174679395493787 0.11757656346368268 5.488405261832546e-05 4.26055382797196 0.2843577319561801 DGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVS(ph)SPVQEK ddPTM_KYSE-520_SHP099_60min_R1 2 DGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVSSPVQEK 41 1 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 DGAEQQGPEATVEEAEAAAFGSEKPQS(0.002)MFEPPQVS(0.499)S(0.499)PVQEK;DGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVS(0.564)S(0.436)PVQEK 93.391 0.00031644 266246000.0 155267.0 199164.0 151220.0 133948.0 146176.0 209455.0 165967.0 201513.0 196274.0 217156.0 True False 146654.02999290897 189595.86248874132 160967.88316055492 146678.37764706518 157679.2195723307 208147.71365161292 182744.56404182836 200813.9984364877 160635.5892648973 215232.16678481136 0.6813759866086064 0.8808899957704688 0.7478802335409755 0.681489109356567 0.7326006234466712 0.9670845987427081 0.8490578651495712 0.9330110895424896 0.7463363476961156 1.0 17.715534181480823 -6.246096429353747 24.81735686628428 0.8917836667207327 0.7490537232161228 0.46198046920466085 0.08298148363249319 729.1301196239436 1179375.0875685364 0.02679787513842289 0.026695113955025804 5.674186036138165e-07 6.246096429353747 -0.14272994350460988 DGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVSS(ph)PVQEK ddPTM_KYSE-520_SHP099_60min_R1 5 DGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVSSPVQEK 41 1 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 DGAEQQGPEATVEEAEAAAFGSEKPQS(0.001)MFEPPQVS(0.297)S(0.702)PVQEK;DGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVS(0.22)S(0.78)PVQEK;DGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVS(0.007)S(0.993)PVQEK;DGAEQQGPEATVEEAEAAAFGSEKPQSMFEPPQVS(0.051)S(0.949)PVQEK;DGAEQQGPEATVEEAEAAAFGSEKPQS(0.001)MFEPPQVS(0.215)S(0.783)PVQEK 266.0 4.2059e-42 956423000.0 594140.0 670461.0 477650.0 456492.0 445326.0 677435.0 539221.0 692079.0 727973.0 708304.0 True False 561181.8698112741 638251.0471775222 508440.0832670216 499876.862430676 480370.6226416638 673206.8768832464 593730.7209698227 689678.3394814527 595791.4539059434 702028.9776121732 0.7993713759794282 0.909151997326976 0.724243727084301 0.7120459103140134 0.6842603908966253 0.9589445711671901 0.8457353469785425 0.9824072245953024 0.8486707428123867 1.0 19.421171056240947 -6.272331471222228 24.967359843100347 0.9209635189608035 0.7684812119675396 0.5396059223253076 0.07438259581679954 633.3123205478752 1451703.485527958 0.027145570182131266 0.024171078625373342 5.341565137857348e-07 6.272331471222228 -0.15248230699326393 DGASS(ph)SPESASR ddPTM_KYSE-520_SHP099_60min_R1 2 DGASSSPESASR 12 0 G5E9M7;Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;G5E9M9;Q14135-6;Q14135-5 G5E9M7 VGLL4 Transcription cofactor vestigial-like protein 4 1 DGAS(0.124)S(0.438)S(0.438)PESASR;DGAS(0.079)S(0.46)S(0.46)PES(0.002)ASR 122.52 0.011195 0.0 612040.0 555450.0 516080.0 391650.0 503040.0 507920.0 445940.0 549750.0 639730.0 473050.0 True False 578088.9211285085 528765.3482525526 549347.3425571962 428872.29824613413 542626.3860939234 504749.8828766427 491019.96715499443 547843.0455626142 523571.1582809377 468859.14502733125 1.232969277147852 1.127770149863941 1.1716681830428475 0.914714584955219 1.1573334803191095 1.0765490835146647 1.0472654151309586 1.168459763178297 1.1166917907731482 1.0 18.838795046875003 -4.423569481769797 1.5711229889099212 1.0808629670924248 1.253856055355386 0.28414058691394783 0.07543184826337493 1.053097166586294 3.162206660383805 0.021111484118933262 0.2552830512527824 3.770774124421163e-05 4.423569481769797 0.17299308826296111 DGDESS(ph)PILTSFELVK ddPTM_KYSE-520_SHP099_60min_R1 6 DGDESSPILTSFELVK 16 0 A8MYT4;A0A1W2PS05;Q8NEB9 A8MYT4 PIK3C3 Phosphatidylinositol 3-kinase;Phosphatidylinositol 3-kinase catalytic subunit type 3 1 DGDES(0.017)S(0.983)PILTSFELVK;DGDES(0.031)S(0.969)PILTSFELVK;DGDES(0.038)S(0.962)PILTSFELVK;DGDES(0.122)S(0.878)PILTSFELVK;DGDES(0.016)S(0.984)PILTSFELVK;DGDES(0.016)S(0.983)PILT(0.001)SFELVK 313.87 4.1168999999999993e-47 707938000.0 1549250.0 1546120.0 1180439.0 1142345.0 1312042.0 1544770.0 1270351.0 1528640.0 1767240.0 1552510.0 True False 1463310.0141466933 1471842.0744265646 1256531.9867091803 1250913.1253414513 1415292.2409022006 1535128.517426663 1398770.4765109958 1523337.5046272594 1446353.7644950305 1538755.9692345026 0.9509695126477123 0.9565142906699974 0.8165895124580913 0.8129379514048307 0.919763932162861 0.99764260748269 0.909026840173269 0.9899799156490593 0.9399500592771444 1.0 20.553333022633947 -6.002322293724819 24.9293950211306 0.9625673142870915 0.882302465055262 0.3695585643701068 0.05110111724564763 108.57939608470122 1165604.0740921632 0.017120025378084963 0.01909290838599208 9.946669923347837e-07 6.002322293724819 -0.08026484923182953 DGDILGK ddPTM_KYSE-520_SHP099_60min_R1 6 DGDILGK 7 0 P61604;B8ZZ54 P61604 HSPE1 10 kDa heat shock protein, mitochondrial 0 ;;;;; 102.72 0.034616 5437820000.0 10005950.0 15061700.0 10834270.0 7705690.0 13940300.0 14859500.0 11149000.0 12248800.0 13999800.0 13495900.0 False True 9450900.007133182 14338113.32392739 11532664.3796449 8438036.460799813 15037322.300542941 14766756.348648362 12276049.723754372 12206311.771691404 11457789.226238376 13376336.82565132 0.7065387280775953 1.0719013367270855 0.8621691072797394 0.6308181807008997 1.1241734188172063 1.1039462104700208 0.9177437652596362 0.9125302338592282 0.8565715244450324 1.0 23.673179745285033 -5.779185570756016 24.999353473960813 0.9839557286845674 0.8391679140002444 0.2726675276547864 0.13256042219541742 401.30242189208195 565318.9002382857 0.043192428419130686 0.04907832843314747 1.6627020385229763e-06 5.779185570756016 -0.144787814684323 DGDKDVFASEVT(ph)PSDLQK ddPTM_KYSE-520_SHP099_60min_R1 1 DGDKDVFASEVTPSDLQK 18 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 DGDKDVFAS(0.006)EVT(0.91)PS(0.084)DLQK 69.98 0.043769999999999996 675220000.0 579650.0 493460.0 413150.0 512440.0 525600.0 423070.0 498490.0 586290.0 570600.0 447350.0 True False 547495.6589963726 469753.44090143923 439782.3100633727 561142.1435292962 566961.7297450821 420429.46320015204 548882.2339935704 584256.2968311143 466993.42365545325 443386.8270330332 1.2348036198098034 1.0594663897546097 0.9918704915214093 1.2655814501396767 1.278706752609144 0.9482227201324347 1.2379308552454529 1.3177123477950916 1.0532415380501625 1.0 18.758206382990192 -5.263486363447637 24.995829894022606 1.1702816492586856 1.0917887948870009 0.03860440573508661 0.13062784201144018 537.5770544948188 6564406.009332023 0.03632687386787374 0.057078034564356055 5.451470126668709e-06 5.263486363447637 -0.07849285437168474 DGDKPEETQGK ddPTM_KYSE-520_SHP099_60min_R1 6 DGDKPEETQGK 11 1 Q14697;Q14697-2;F5H6X6;E9PKU7 Q14697 GANAB Neutral alpha-glucosidase AB 0 ;;;;; 125.03 0.00020897 2067440000.0 4125800.0 4319920.0 3212880.0 2811840.0 4101870.0 4140840.0 3257150.0 3977030.0 4250380.0 3789730.0 False True 3896933.6494216034 4112384.5588678843 3419987.3855897603 3079076.428189475 4424663.832552239 4114995.481593396 3586414.5087206545 3963234.611175783 3478618.1353604407 3756155.940565329 1.0374791971057213 1.094838612650608 0.9105019705531786 0.8197413730714416 1.1779766076182383 1.095533717637415 0.9548098016880717 1.0551304775113481 0.9261112132732389 1.0 21.840825528484707 -4.718755190769045 24.999970507355968 0.9972356846856455 1.0661589431811043 0.08361178369552569 0.09655047866256519 421.55037428689064 246894.8454694332 0.025855484603853972 0.06840610630686275 1.9109301350388195e-05 4.718755190769045 0.06892325849545877 DGDKS(ph)PMSSLQISNEK ddPTM_KYSE-520_SHP099_60min_R1 12 DGDKSPMSSLQISNEK 16 1 Q9UER7-3;Q9UER7;Q9UER7-2;Q9UER7-5;Q9UER7-4 Q9UER7-3 DAXX Death domain-associated protein 6 1 DGDKS(1)PMSSLQISNEK;DGDKS(0.997)PMS(0.003)S(0.001)LQISNEK;DGDKS(0.405)PMS(0.297)S(0.297)LQISNEK;DGDKS(0.769)PMS(0.116)S(0.116)LQISNEK;DGDKS(0.815)PMS(0.104)S(0.081)LQISNEK;DGDKS(0.993)PMS(0.007)SLQISNEK;DGDKS(0.987)PMS(0.012)SLQISNEK;DGDKS(0.992)PMS(0.008)SLQISNEK;DGDKS(0.991)PMS(0.004)S(0.005)LQISNEK;DGDKS(0.999)PMS(0.001)SLQISNEK;DGDKS(0.994)PMS(0.005)S(0.001)LQISNEK;DGDKS(1)PMSSLQISNEK 302.84 2.8220999999999994e-38 36094460000.0 16423500.0 14305980.0 14097270.0 13621130.0 14703500.0 14669130.0 14147410.0 14760160.0 17511090.0 13795240.0 True False 15512455.715564435 13618699.247086225 15006002.580629507 14915678.099857925 15860581.79852894 14577574.518432528 15577568.268215971 14708960.450007237 14331517.474656122 13673024.906134306 1.1345299099546642 0.9960268002566347 1.0974895960218116 1.090883561044792 1.1599907048668654 1.0661557788790688 1.1392920275620362 1.07576491310333 1.0481599772575847 1.0 23.70482911229919 -7.951549925963686 2.1513541934006857 1.0011418285425224 1.0951356308555098 0.33578577938538845 0.043109924124776655 0.34927688425070225 3.6327426962898914 0.04083425774322696 0.01138118837580053 1.118021290833005e-08 7.951549925963686 0.09399380231298737 DGDKSPMS(ph)SLQISNEK ddPTM_KYSE-520_SHP099_60min_R1 3 DGDKSPMSSLQISNEK 16 1 Q9UER7-3;Q9UER7;Q9UER7-2;Q9UER7-5;Q9UER7-4 Q9UER7-3 DAXX Death domain-associated protein 6 1 DGDKS(0.402)PMS(0.539)S(0.059)LQISNEK;DGDKS(0.146)PMS(0.848)S(0.006)LQISNEK;DGDKS(0.138)PMS(0.557)S(0.305)LQIS(0.001)NEK 303.86 1.8903e-38 10895800000.0 5440320.0 4761690.0 4332950.0 4609700.0 4825800.0 4248220.0 4463110.0 4695550.0 5269890.0 4587560.0 True False 5138534.604590948 4532931.264957596 4612258.88996512 5047804.502043154 5205563.004953987 4221705.283182802 4914284.714556046 4679262.23299961 4313010.819116089 4546917.78746767 1.130113814407181 0.9969239552673189 1.0143704165220548 1.1101596153675883 1.1448553170021443 0.9284762734920726 1.0807947150707062 1.029106408278749 0.9485570271368703 1.0 22.11645748836485 -7.590185235769792 5.336993037340294 0.9758913295829957 1.0543980541549092 0.21418094032174617 0.06312253121016309 0.33349388970957455 17.812863768534765 0.04487621595436518 0.01622915993254411 2.569299688445374e-08 7.590185235769792 0.07850672457191343 DGDKSPMSS(ph)LQISNEK ddPTM_KYSE-520_SHP099_60min_R1 1 DGDKSPMSSLQISNEK 16 1 Q9UER7-3;Q9UER7;Q9UER7-2;Q9UER7-5;Q9UER7-4 Q9UER7-3 DAXX Death domain-associated protein 6 1 DGDKS(0.259)PMS(0.257)S(0.484)LQISNEK 99.5 0.0011947000000000001 234550000.0 724600.0 626130.0 580470.0 600760.0 649490.0 684060.0 600740.0 635500.0 750860.0 655570.0 True False 684404.993545711 596049.7749597101 617888.0249848382 657856.0497749203 700601.1679074072 679790.5278008264 661468.6618574049 633295.5988268157 614522.7516402632 649762.1598257424 1.0533161760747338 0.9173353140779432 0.9509449198312004 1.0124566963877193 1.078242488136427 1.0462143994090656 1.0180165955413625 0.9746575562305094 0.9457656810994813 1.0 19.309552202374217 -3.9499313187063883 21.83184956033163 0.9965319091251417 1.7569116744993933 0.12803584943255675 0.04612825413984013 2181.736884125405 683381.5995799152 0.012464419114674401 132599.9613377425 0.00011221959094064409 3.9499313187063883 0.7603797653742517 DGDS(ph)YDPYDFS(ph)DTEEEMPQVHTPK ddPTM_KYSE-520_SHP099_60min_R1 1 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 DGDS(0.837)Y(0.075)DPY(0.12)DFS(0.514)DT(0.45)EEEMPQVHT(0.005)PK 53.968 0.041866 259680000.0 177400.0 185590.0 180240.0 200260.0 188250.0 170280.0 190060.0 188380.0 231020.0 196130.0 True False 167559.26836186732 176673.97782373082 191858.55879419667 219292.65018963558 203064.2040040178 169217.21935784112 209273.11960684872 187726.55374822233 189072.5915402784 194392.44078683123 0.8619639101379004 0.9088520989222503 0.9869651207506922 1.1280924777836894 1.0446095701154139 0.8704927962883238 1.076549678371164 0.9657091242250585 0.9726334561929467 1.0 17.56861259332192 -4.702812568501992 3.264670064846392 1.008779308331596 0.8727150864889719 0.36187608810987903 0.06543351211835792 0.263505783530443 5.532009068339381 0.017912828045840375 0.05508284603121325 1.9823823918062082e-05 4.702812568501992 -0.136064221842624 DGDSYDPYDFS(ph)DT(ph)EEEMPQVHT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 11 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 3 DGDSYDPY(0.004)DFS(0.996)DT(1)EEEMPQVHT(1)PK;DGDS(0.001)Y(0.001)DPY(0.225)DFS(0.784)DT(0.99)EEEMPQVHT(1)PK;DGDSYDPYDFS(1)DT(1)EEEMPQVHT(1)PK;DGDSYDPYDFS(1)DT(1)EEEMPQVHT(1)PK;DGDSYDPY(0.003)DFS(0.997)DT(1)EEEMPQVHT(1)PK;DGDSYDPYDFS(1)DT(1)EEEMPQVHT(1)PK;DGDSYDPYDFS(1)DT(1)EEEMPQVHT(1)PK;DGDSYDPYDFS(1)DT(1)EEEMPQVHT(1)PK;DGDSYDPY(0.007)DFS(0.993)DT(1)EEEMPQVHT(1)PK;DGDSYDPY(0.053)DFS(0.947)DT(1)EEEMPQVHT(1)PK;DGDS(0.003)Y(0.002)DPY(0.075)DFS(0.922)DT(0.999)EEEMPQVHT(1)PK 238.42 1.5647999999999998e-28 11439600000.0 6761420.0 6810580.0 5799690.0 6511200.0 6194140.0 6347810.0 5814280.0 6616370.0 7718550.0 6514370.0 True False 6386350.5540434 6483389.513911012 6173547.2972321 7130022.490336331 6681583.57816439 6308190.96318944 6402044.164304472 6593419.35674236 6317055.888811424 6456657.749903162 0.9891108993874088 1.0041401859976626 0.9561521667033833 1.1042899850845072 1.03483626312152 0.9770056285365367 0.9915415083601868 1.0211814861708055 0.9783786183968275 1.0 22.622356125044448 -6.259492443577379 24.980736442727675 0.9948152954463818 1.0183428236826138 0.09391292634856585 0.03728668683180583 494.2795713287027 6342062.830608298 0.013333090470613847 0.012697022784179649 5.501834932384362e-07 6.259492443577379 0.023527528236231943 DGDSYDPYDFS(ph)DT(ph)EEEMPQVHTPK ddPTM_KYSE-520_SHP099_60min_R1 6 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 DGDSYDPYDFS(1)DT(1)EEEMPQVHTPK;DGDSYDPY(0.005)DFS(0.996)DT(1)EEEMPQVHTPK;DGDSYDPY(0.001)DFS(0.995)DT(0.585)EEEMPQVHT(0.419)PK;DGDSYDPYDFS(1)DT(1)EEEMPQVHTPK;DGDSYDPYDFS(1)DT(1)EEEMPQVHTPK;DGDSYDPY(0.007)DFS(0.993)DT(0.998)EEEMPQVHT(0.002)PK 224.91 2.8922e-21 7652100000.0 3815000.0 3727070.0 3452580.0 3658630.0 3484730.0 3627280.0 3553250.0 3606010.0 4484690.0 3774920.0 True False 3603374.344986049 3548015.962753879 3675138.831123319 4006345.0951927784 3758958.42559851 3604640.8000488 3912447.186378172 3593501.5929590613 3670383.3458348676 3741477.145643315 0.9630886959130361 0.9482928331889698 0.9822694855700931 1.0707923473107095 1.004672293662291 0.9634271865715254 1.045695866653613 0.9604499648336592 0.9809984674391955 1.0 21.835176531940448 -4.997635145813664 19.19554372973931 1.00405440454089 0.9580878179182594 0.26122049147797977 0.03226333693774007 5.665284606203083 45925.06709137253 0.00869118393592571 0.017748865939575576 1.0054601304691681e-05 4.997635145813664 -0.045966586622630534 DGDSYDPYDFS(ph)DTEEEMPQVHT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 11 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 DGDSYDPY(0.054)DFS(0.88)DT(0.066)EEEMPQVHT(0.999)PK;DGDSYDPY(0.011)DFS(0.985)DT(0.003)EEEMPQVHT(1)PK;DGDSYDPY(0.006)DFS(0.994)DTEEEMPQVHT(1)PK;DGDSYDPYDFS(1)DTEEEMPQVHT(1)PK;DGDSYDPYDFS(1)DT(0.001)EEEMPQVHT(0.999)PK;DGDSYDPYDFS(1)DT(0.019)EEEMPQVHT(0.981)PK;DGDSYDPYDFS(1)DTEEEMPQVHT(1)PK;DGDSYDPYDFS(0.999)DT(0.001)EEEMPQVHT(1)PK;DGDSYDPYDFS(1)DTEEEMPQVHT(1)PK;DGDSYDPYDFS(1)DTEEEMPQVHT(1)PK;DGDSYDPYDFS(1)DTEEEMPQVHT(1)PK 229.48 1.0988e-21 38053200000.0 14675970.0 13648280.0 12362580.0 12596510.0 13792740.0 13651240.0 13482390.0 13817500.0 16505770.0 13618720.0 True False 13861864.688279126 12992596.142314054 13159491.687627368 13793678.523121173 14878150.168044465 13566037.54748964 14845321.55664622 13769570.31752874 13508738.244601248 13498068.73600383 1.0269517039356106 0.9625522285020292 0.9749166302973874 1.0219001542293864 1.1022428807433393 1.005035447130634 1.0998107838233793 1.0201141057165257 1.0007904470488405 1.0 23.68624966968743 -5.448575469551703 5.485787179515452 1.0422160221613157 0.9866521515679748 0.24759513870586314 0.03829488605127856 0.27429721440132354 14.792148256788876 0.010696608635262807 0.015852337453583765 3.559791243653794e-06 5.448575469551703 -0.05556387059334089 DGDSYDPYDFS(ph)DTEEEMPQVHTPK ddPTM_KYSE-520_SHP099_60min_R1 19 DGDSYDPYDFSDTEEEMPQVHTPK 24 0 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 DGDSYDPY(0.005)DFS(0.963)DT(0.032)EEEMPQVHTPK;DGDSYDPY(0.002)DFS(0.995)DT(0.003)EEEMPQVHTPK;DGDSYDPYDFS(1)DTEEEMPQVHTPK;DGDSYDPYDFS(1)DTEEEMPQVHTPK;DGDSYDPYDFS(1)DTEEEMPQVHTPK;DGDSYDPYDFS(1)DTEEEMPQVHTPK;DGDSYDPYDFS(0.992)DT(0.008)EEEMPQVHTPK;DGDSYDPYDFS(1)DTEEEMPQVHTPK;DGDSYDPYDFS(0.999)DT(0.001)EEEMPQVHTPK;DGDSYDPYDFS(1)DTEEEMPQVHTPK;DGDSYDPY(0.135)DFS(0.699)DT(0.166)EEEMPQVHTPK;DGDSYDPYDFS(1)DTEEEMPQVHTPK;DGDSYDPY(0.121)DFS(0.877)DT(0.002)EEEMPQVHTPK;DGDSYDPYDFS(0.997)DT(0.002)EEEMPQVHTPK;DGDSYDPYDFS(1)DTEEEMPQVHTPK;DGDSYDPYDFS(1)DTEEEMPQVHTPK;DGDSYDPYDFS(0.994)DT(0.006)EEEMPQVHTPK;DGDSYDPYDFS(0.997)DT(0.003)EEEMPQVHTPK;DGDS(0.007)Y(0.007)DPY(0.051)DFS(0.923)DT(0.011)EEEMPQVHT(0.001)PK 319.77 3.6103999999999994e-61 69861470000.0 22731312.0 22389482.0 19524992.0 20166259.0 20975801.0 21575518.0 20313133.0 20982864.0 25339358.0 21521599.0 True False 21470360.809612963 21313857.677422363 20783604.225411743 22082854.192153145 22626477.20271808 21440857.18912994 22366582.72071359 20910079.342221286 20738369.340433247 21330934.37641064 1.00653634907604 0.9991994397110348 0.9743410137905549 1.0352502052874923 1.060735399746021 1.0051532113305295 1.048551475806341 0.9802702016347316 0.972220390090708 1.0 24.346443826828104 -7.300867921576689 24.660705221367724 0.9821839454907444 1.0178454096751643 0.29010720461583883 0.024566194768683172 638.3210500101551 399236.3176952888 0.014349297497932907 0.006893501855123447 5.001866295105893e-08 7.300867921576689 0.035661464184419955 DGEKEESKKEET(ph)PGTPK ddPTM_KYSE-520_SHP099_60min_R1 1 DGEKEESKKEETPGTPK 17 3 Q99442 Q99442 SEC62 Translocation protein SEC62 1 DGEKEES(0.006)KKEET(0.572)PGT(0.423)PK 75.358 0.0086069 635800000.0 1000200.0 1380100.0 1051800.0 1222300.0 1144100.0 1002500.0 858690.0 941520.0 1993500.0 741060.0 True False 944716.9121507328 1313797.9244276679 1119600.7109395016 1338467.0245021044 1234134.160961469 996243.0256415056 945494.7652068029 938254.08687242 1631530.6520454742 734494.7849359559 1.2862132332676905 1.7887096700655596 1.5243140372155604 1.8222961577852614 1.680249045020897 1.3563650090835877 1.2872722646890475 1.2774142255540057 2.2212964414549723 1.0 19.486392721823208 -6.2548273602542155 24.038455285532454 1.436983145237757 1.6355925765888042 0.07901217477989775 0.324841903547508 870.6614392792878 3165350.5385131724 0.10552384846625873 0.10306556826293131 5.561252829829165e-07 6.2548273602542155 0.19860943135104714 DGEKEESKKEETPGT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 DGEKEESKKEETPGTPK 17 3 Q99442 Q99442 SEC62 Translocation protein SEC62 1 DGEKEESKKEET(0.115)PGT(0.884)PK;DGEKEES(0.001)KKEET(0.209)PGT(0.79)PK;DGEKEESKKEET(0.005)PGT(0.995)PK 109.05 0.00013517 4879100000.0 3167000.0 4399890.0 3780450.0 4059320.0 3780730.0 3365340.0 3025840.0 3860980.0 7100020.0 2433620.0 True False 2991320.19674202 4188512.6800304633 4024143.8559338697 4445116.552320937 4078251.9415888963 3344335.664750511 3331721.4365526 3847587.161539503 5810835.344939007 2412060.020127711 1.2401516429029984 1.7364877511666128 1.668343168227134 1.84287145229727 1.6907754813551306 1.3865059894212082 1.3812763400374242 1.5951456968039235 2.409075767787628 1.0 21.201834376090886 DGELPVEDDIDLS(ph)DVELDDLGKDEL ddPTM_KYSE-520_SHP099_60min_R1 7 DGELPVEDDIDLSDVELDDLGKDEL 25 1 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 1 DGELPVEDDIDLS(1)DVELDDLGKDEL;DGELPVEDDIDLS(1)DVELDDLGKDEL;DGELPVEDDIDLS(1)DVELDDLGKDEL;DGELPVEDDIDLS(1)DVELDDLGKDEL;DGELPVEDDIDLS(1)DVELDDLGKDEL;DGELPVEDDIDLS(1)DVELDDLGKDEL;DGELPVEDDIDLS(1)DVELDDLGKDEL 260.76 7.289099999999999e-38 1645511000.0 2523654.0 2768491.0 1914130.0 1941402.0 2043172.0 2663696.0 1949570.0 2306698.0 3078775.0 2498026.0 True False 2383661.8818404744 2635488.536770286 2037517.882516283 2125912.2623762065 2203958.0123415478 2647070.885216138 2146651.5615696334 2298696.6030253605 2519747.069601856 2475895.4330748226 0.9627473963551832 1.0644587414975213 0.8229418154327637 0.8586437997246229 0.8901660316100043 1.069136785768344 0.867020284012439 0.9284304063562981 1.0177114251035126 1.0 21.239518954405423 DGELPVEDDIDLSDVELDDLGKDEL ddPTM_KYSE-520_SHP099_60min_R1 4 DGELPVEDDIDLSDVELDDLGKDEL 25 1 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 ;;; 183.01 3.3978e-12 322775000.0 184963.0 202130.0 771423.0 110303.9 271920.0 203065.0 157057.0 137460.0 544532.0 277345.0 False True 174702.73367540087 192419.37139668473 821150.1609004397 120787.14949192332 293318.55698683887 201797.5960118631 172933.85428860819 136983.1833434051 445658.71533465054 274887.9390711451 0.6355416475008938 0.6999920478391151 2.987217859303437 0.4394050532011949 1.0670477503595517 0.7341085850974163 0.629106736632233 0.49832373077653225 1.6212377918090741 1.0 18.068484083273976 DGEQS(ph)PNVSLMQR ddPTM_KYSE-520_SHP099_60min_R1 1 DGEQSPNVSLMQR 13 0 Q58WW2;Q58WW2-2;Q58WW2-4;Q58WW2-3;F2Z305 Q58WW2 DCAF6 DDB1- and CUL4-associated factor 6 1 DGEQS(1)PNVSLMQR 107.74 0.022358000000000003 0.0 529180.0 821170.0 733350.0 547270.0 893280.0 631480.0 586950.0 723390.0 1073100.0 489910.0 True False 499825.33050582284 781719.7605987008 780622.9144014867 599282.3762572742 963576.0539320527 627538.6990843874 646284.6340799737 720880.7289304959 878252.0906496086 485569.7785442121 1.0293584003608098 1.6099020061388019 1.6076431213282552 1.2341838449130507 1.9844234474825684 1.2923759402115442 1.3309819981334117 1.4846078993873344 1.808704185179519 1.0 18.889319106695172 DGETLEELMKLS(ph)PEELLLR ddPTM_KYSE-520_SHP099_60min_R1 2 DGETLEELMKLSPEELLLR 19 1 P13797;A0A0A0MSQ0;P13797-3;P13797-2 P13797 PLS3 Plastin-3 1 DGETLEELMKLS(1)PEELLLR;DGETLEELMKLS(1)PEELLLR 107.17 0.00011479 98895000.0 84672.0 75641.0 62669.0 70378.0 68721.0 75253.0 69729.0 78869.0 97169.0 72161.0 True False 79975.07537055272 72007.09282054435 66708.74401394528 77066.7039600828 74128.95173099643 74783.31811331706 76777.88780945992 78595.42184716304 79525.55903115447 71521.70968040852 1.118193003605726 1.0067865147841788 0.9327062274102541 1.077528827323226 1.0364538552313451 1.0456030546177222 1.0734906667155804 1.098903007189888 1.1119079701325763 1.0 16.126093603178706 -6.445165292373478 1.424015615458134 1.0797664106157863 1.0262245024146934 0.08185874175299501 0.0529284333821824 0.8245669116434617 3.378287006744599 0.026977719772957803 0.020982267839007387 3.5878535503729077e-07 6.445165292373478 -0.053541908201092836 DGFHIR ddPTM_KYSE-520_SHP099_60min_R1 2 DGFHIR 6 0 X1WI28;P27635;F8W7C6;A0A087WV22;B8A6G2;A6QRI9 X1WI28 RPL10 60S ribosomal protein L10 0 ; 122.51 0.06009400000000001 1685280000.0 1762270.0 1453820.0 1023800.0 969860.0 1707480.0 1451030.0 1128600.0 1269360.0 1359650.0 1266010.0 False True 1664513.3701018493 1383976.3049716905 1089795.7861379175 1062035.2028009596 1841848.9617677557 1441973.5835377506 1242689.9020745524 1264956.8864308505 1112771.8339872735 1254794.136340875 1.3265230701155195 1.1029508864358626 0.8685056413443948 0.846382025579094 1.4678495128601736 1.1491714391834127 0.9903536094760373 1.0080991373769177 0.8868162527697532 1.0 20.25901926191311 -6.836895651497262 5.671442047811699 0.9689681746015759 1.116597185258671 0.15576803339345446 0.1768328459362114 0.482967676167061 26.708336900523346 0.08102285501936271 0.05454572218124498 1.4558088276527805e-07 6.836895651497262 0.147629010657095 DGFIDKEDLHDMLASLGK ddPTM_KYSE-520_SHP099_60min_R1 5 DGFIDKEDLHDMLASLGK 18 1 J3QRS3;P19105;O14950;P24844;J3KTJ1 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 0 ;;;; 205.78 1.9081e-13 6150532000.0 13007720.0 11968150.0 8044290.0 9413730.0 14811150.0 12510650.0 9666720.0 9712390.0 9700280.0 8476390.0 False True 12286155.841353048 11393182.109440612 8562837.80471907 10308408.068858868 15976703.241084218 12432566.39276 10643926.395695666 9678699.985978862 7938953.676159341 8401295.779131636 1.4624120093320834 1.3561220089097041 1.019228227387101 1.2270021601268217 1.9016951266933708 1.4798391485801299 1.2669386575026442 1.152048474477024 0.9449677626967107 1.0 23.002180429353043 -7.344303543437022 2.066930310804748 0.9812589206892456 1.3979074491620354 0.394113426086132 0.21224409701519334 0.4069228101896819 3.216823098644805 0.17868426881900937 0.06792159142840704 4.5258114471449854e-08 7.344303543437022 0.41664852847278977 DGFIDLMELK ddPTM_KYSE-520_SHP099_60min_R1 3 DGFIDLMELK 10 0 Q96C19;A0A087X1Z2;H0Y4Y4;Q9BUP0-2;Q9BUP0 Q96C19 EFHD2;EFHD1 EF-hand domain-containing protein D2;EF-hand domain-containing protein D1 0 ;; 119.16 0.0048317 89388600.0 190429.0 228948.0 203452.0 145436.0 220637.0 211852.0 179734.0 204037.0 239743.0 209099.0 False True 179865.5237591997 217948.99442204612 216566.84145470944 159258.19371307202 237999.87664719493 210529.75308549084 197903.26675480013 203329.2432695939 196211.71462921362 207246.54553656024 0.867881890593297 1.0516411448874927 1.0449720206144764 0.7684480013925123 1.148390078256863 1.0158420375134862 0.9549170831409015 0.9810983471071884 0.9467550550539817 1.0 17.6609885289742 DGFPS(ph)GTPALNAK ddPTM_KYSE-520_SHP099_60min_R1 1 DGFPSGTPALNAK 13 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 DGFPS(0.961)GT(0.039)PALNAK 80.312 0.009624899999999999 399920000.0 837350.0 693340.0 643060.0 953650.0 878530.0 852110.0 692340.0 848610.0 837500.0 1041500.0 True False 790900.5262841588 660030.9056754421 684512.6765323785 1044284.6092746729 947665.3128480723 846791.6654158445 762328.4837872544 845666.3699770628 685431.111656926 1032273.1202747385 0.7661737099902992 0.6393956141178756 0.6631119837259699 1.0116359602551093 0.9180373820020151 0.8203174613230961 0.7384949475235405 0.8192273472663799 0.6640017047760569 1.0 19.977393300874997 -11.568435476470114 2.096447480360708 4.325006654395769 0.7862179197473784 0.254198898919467 0.11170049797602734 4676284.654162165 276342.0852427617 74031855.06517962 0.032458170498714134 2.701248405468897e-12 11.568435476470114 -3.5387887346483904 DGGAAS(ph)PATEGR ddPTM_KYSE-520_SHP099_60min_R1 1 DGGAASPATEGR 12 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 DGGAAS(0.999)PAT(0.001)EGR 143.94 9.6275e-05 0.0 89262.0 97874.0 76200.0 64935.0 84926.0 86878.0 73732.0 84894.0 102620.0 85938.0 True False 84310.45892061452 93171.98612813101 81111.97392431067 71106.40287658031 91609.1930371592 86335.76217624209 81185.55011497514 84599.52252840849 83986.79483968217 85176.65617875232 0.9898305792103413 1.0938676194637136 0.9522793869025395 0.8348109219896578 1.0755199505003754 1.0136082589936057 0.9531431938886938 0.9932242743935303 0.9860306638878485 1.0 16.378170473971373 DGGAWGTEQR ddPTM_KYSE-520_SHP099_60min_R1 1 DGGAWGTEQR 10 0 P09382 P09382 LGALS1 Galectin-1 0 103.55 0.018233000000000003 426800000.0 551390.0 486590.0 486300.0 463550.0 536700.0 560780.0 499280.0 494800.0 624900.0 534100.0 False True 520803.29753128544 463213.4860135192 517647.6761075107 507605.6526286101 578935.2365947205 557279.9640092208 549752.0949032283 493083.65428718796 511433.91244706034 529368.2895235124 0.983820353123274 0.8750306642478728 0.9778592453534543 0.9588894209842245 1.0936341447951552 1.052726381685673 1.0385059055918584 0.9314567269056021 0.9661211722889657 1.0 19.013912250839123 -5.319077391690678 2.5132497402535003 1.0129650624503383 0.9339981832692693 0.2551777083519584 0.051383445561117014 0.39630696982837127 4.905753298036071 0.016453353549710788 0.02863014976650052 4.796479672954776e-06 5.319077391690678 -0.07896687918106904 DGGGGGEFYGYMTMDRPLS(ph)HCGR ddPTM_KYSE-520_SHP099_60min_R1 3 DGGGGGEFYGYMTMDRPLSHCGR 23 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 DGGGGGEFYGYMT(0.017)MDRPLS(0.983)HCGR;DGGGGGEFYGYMTMDRPLS(1)HCGR;DGGGGGEFYGYMTMDRPLS(1)HCGR 120.57 9.664600000000001e-05 1358200000.0 412280.0 410360.0 392060.0 429140.0 373140.0 331985.0 325574.0 408820.0 482020.0 410510.0 True False 389410.0065401958 390645.6896370826 417332.81491817994 469925.3365743545 402503.9951238203 329912.9584714171 358486.19721603766 407401.8988393049 394497.3187353693 406873.20077194733 0.9570795171600902 0.9601165397374987 1.025707306665536 1.154967532102828 0.9892615054522208 0.8108495665123284 0.8810759630663643 1.0012994172787848 0.9695829511181919 1.0 18.63421973300847 -6.0091861167250435 24.95954977381424 0.9261616710433482 1.0264790953096712 0.257842244902192 0.07351391302851845 612.3046756005258 1663694.014648321 0.02532791885937499 0.0272466334031334 9.790703153016874e-07 6.0091861167250435 0.10031742426632295 DGGQTES(ph)NEEGKENR ddPTM_KYSE-520_SHP099_60min_R1 5 DGGQTESNEEGKENR 15 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5;Q5VU81;Q5VU80;Q5VU79;Q5VU78;Q5VU77 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 DGGQT(0.168)ES(0.832)NEEGKENR;DGGQT(0.045)ES(0.955)NEEGKENR;DGGQTES(1)NEEGKENR;DGGQTES(1)NEEGKENR;DGGQTES(1)NEEGKENR 232.84 9.0049e-19 4622590000.0 2458717.0 2318650.0 2211792.0 2179256.0 2123059.0 2049409.0 2075727.0 2167140.0 2700053.0 2111630.0 True False 2322327.0666791736 2207258.573635398 2354367.651312327 2386371.8350227913 2290131.664746699 2036617.8782413295 2285561.742303301 2159622.697154277 2209791.4379971568 2092922.6010232791 1.109609627008535 1.05462981409643 1.1249186425533468 1.1402102657097963 1.0942266396411409 0.9730975609158117 1.0920431272450477 1.0318693563242074 1.0558400186020915 1.0 20.997087529181254 -6.027918736715956 24.343858178872917 1.0360992558613076 1.1063806535155254 0.5138489058203886 0.036036580994993184 458.63650264257785 399909.0227440118 0.011713199992881432 0.011743306912682388 9.377374558422438e-07 6.027918736715956 0.07028139765421781 DGHHCCLK ddPTM_KYSE-520_SHP099_60min_R1 4 DGHHCCLK 8 0 Q13642;A0A0D9SFZ9;A0A494C0D6;Q5JXI8;Q5JXI2;Q5JXI3;Q5JXH7;Q5JXH8;A0A494C1G1;Q5JXH9;A0A0D9SFB0;A0A0D9SFI6;Q5JXI0;A0A0D9SGB2;A0A0D9SGD1;A0A494C0J3;A0A0D9SEY7;Q13642-5;Q13642-4;Q13642-3;Q13642-1 Q13642 FHL1 Four and a half LIM domains protein 1 0 ;;; 87.181 0.005464899999999999 6547300000.0 3921550.0 5599050.0 2408810.0 2441160.0 5017500.0 6397220.0 3324520.0 4369430.0 2889250.0 4737120.0 False True 3704013.8040838894 5330063.23365461 2564085.746832268 2673167.1124384855 5412348.704330187 6357292.5770517355 3660594.9257884887 4354273.4671626305 2364635.032065403 4695152.802223597 0.7889016524296484 1.1352267877480628 0.5461133758240907 0.569346137397805 1.1527524092010235 1.354011859644048 0.7796540559989554 0.9273976056967671 0.5036332429789134 1.0 22.162740680008973 -3.2216602067022464 18.36363886302346 0.8815522187397877 0.872443955354604 0.0 0.27368450609288475 0.0 0.0 0.0649605225652644 0.0 0.0006002605382124817 3.2216602067022464 -0.009108263385183779 DGHNLISLLEVLSGDS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 1 DGHNLISLLEVLSGDSLPR 19 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;E9PKG0;E9PIA2;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 DGHNLISLLEVLS(0.01)GDS(0.99)LPR 71.09100000000001 0.0086142 46959000.0 45167.0 50399.0 58944.0 62842.0 59068.0 54961.0 53875.0 56144.0 63051.0 48362.0 True False 42661.49647181774 47977.75638955873 62743.624553734604 68814.48478586365 63716.31554905343 54617.9680122522 59321.21076933065 55949.249568108135 51602.52778636527 47933.55030506662 0.890013282978298 1.0009222368093071 1.3089709431997267 1.4356225305220067 1.329263431219668 1.1394517548698875 1.2375718133079816 1.1672252360200042 1.0765429945820397 1.0 15.548748179882335 -10.140040190662564 13.33083288472681 1.0000320781273198 1.1875229593080983 0.10140477952408544 0.15403554401684041 0.0 0.0 0.16383371192030896 0.039735511722614664 7.243689221197246e-11 10.140040190662564 0.1874908811807785 DGHRIS(ph)LPSDFQHK ddPTM_KYSE-520_SHP099_60min_R1 3 DGHRISLPSDFQHK 14 1 Q5TCX8;Q5TCX8-2 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 DGHRIS(0.843)LPS(0.157)DFQHK;DGHRIS(0.996)LPS(0.004)DFQHK;DGHRIS(1)LPSDFQHK 148.26 2.1396000000000002e-06 2671930000.0 1436430.0 1528700.0 1636390.0 2247380.0 1809730.0 1517740.0 1593670.0 1569600.0 2001220.0 1589320.0 True False 1356748.3644477862 1455258.9573745192 1741874.317716575 2460970.319500562 1952145.4550448393 1508267.2216829336 1754773.716320357 1564155.4239473948 1637848.8946508376 1575239.8612722484 0.8612963636864822 0.9238332479722636 1.1057835448055153 1.5622829132275449 1.2392686999859066 0.957484164008379 1.113972392054063 0.9929633336500886 1.0397457142355595 1.0 20.58714009337827 -6.267881692580218 24.840997247684182 1.0262145371266236 1.1482941116394032 0.09372275336768798 0.18127931314194806 1406.8517140715564 5424678.013569403 0.07133640033235626 0.06444625626941153 5.396576121890574e-07 6.267881692580218 0.12207957451277962 DGHRYS(ph)RS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 1 DGHRYSRSPAR 11 2 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-4;Q8N2M8-3 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 2 DGHRY(0.024)S(0.981)RS(0.996)PAR 52.111999999999995 0.056511 160300000.0 106590.0 108300.0 103440.0 117000.0 118380.0 93159.0 95868.0 109730.0 133430.0 89725.0 True False 100677.24021810289 103097.10543838584 110107.90790985165 128119.64482266732 127695.8325099369 92577.56012542345 105559.27302151622 109349.37224117458 109202.4754965777 88930.10630499377 1.1320940050697934 1.1593048712300544 1.2381398435781323 1.4406779677432244 1.435912289050826 1.041014837066768 1.1869914184009995 1.2296102724329498 1.2279584499995764 1.0 16.440384289763067 -6.273286656458357 24.962968227191684 1.1545829246940822 1.2809172073533197 0.2686724358361452 0.1171203567248764 1306.828151434106 2753562.9480101885 0.045051071367284375 0.04003739585510684 5.329829834690441e-07 6.273286656458357 0.12633428265923752 DGHRYS(ph)RS(ph)PARR ddPTM_KYSE-520_SHP099_60min_R1 1 DGHRYSRSPARR 12 3 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-4;Q8N2M8-3 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 2 DGHRY(0.005)S(0.996)RS(0.999)PARR 66.335 0.064476 1109600000.0 241750.0 228040.0 310560.0 224410.0 216780.0 209660.0 230480.0 205480.0 348430.0 133450.0 True False 228339.64558332256 217084.61610498154 330579.1945135688 245737.85892867297 233839.35269052294 208351.43417057203 253779.16766803365 204767.23783939274 285163.8952055203 132267.73682252888 1.7263442398632616 1.6412514595018457 2.499318446471384 1.85788208698538 1.7679243503219417 1.5752249125584492 1.91867778011915 1.548126873253608 2.1559595866385837 1.0 17.013101672088954 -5.748323587309928 3.6618570396827623 1.6926702999488452 1.957546444626519 0.12416117859293196 0.35132153311428765 0.5340401180450902 15.31424999045973 0.10684172042149381 0.1330654650353472 1.7851569813853335e-06 5.748323587309928 0.26487614467767373 DGKFS(ph)PIQEK ddPTM_KYSE-520_SHP099_60min_R1 6 DGKFSPIQEK 10 1 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 DGKFS(1)PIQEK;DGKFS(1)PIQEK;DGKFS(1)PIQEK;DGKFS(1)PIQEK;DGKFS(1)PIQEK;DGKFS(1)PIQEK 172.43 2.5259e-05 13729340000.0 20171500.0 17686500.0 16298500.0 17737200.0 18294900.0 18370100.0 17771700.0 18451500.0 20299400.0 18824100.0 True False 19052546.68411169 16836813.99202225 17349127.388522014 19422938.155116383 19734604.54625819 18255445.39185738 19568236.871077724 18387496.053112496 16613540.6662312 18657333.1189282 1.0211827468944388 0.9024234002093792 0.9298824905967408 1.0410350735181686 1.0577398399044007 0.9784595298530046 1.048822827268137 0.9855372113422818 0.8904563455200606 1.0 24.153239446164093 -5.247607237197032 24.87248442621153 1.003196329658937 0.9462889292078919 0.15022969518295115 0.05285381566261883 1294.6216121397806 2327940.0621362566 0.014671433652361659 0.02522356294160646 5.654481178335252e-06 5.247607237197032 -0.05690740045104514 DGKFS(ph)PIQEKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 DGKFSPIQEKSPK 13 2 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 2 DGKFS(1)PIQEKS(1)PK;DGKFS(1)PIQEKS(1)PK 112.82 8.509e-05 2008330000.0 6963600.0 6486000.0 6473100.0 5426000.0 6100600.0 6052600.0 5230500.0 5505400.0 7934500.0 5980900.0 True False 6577315.226407557 6174402.824315524 6890366.383326198 5941685.408613614 6580682.5123341875 6014823.478302023 5759249.984760718 5486303.052370016 6493794.812467931 5927913.879069785 1.109549727034779 1.0415810604327502 1.1623593938593864 1.0023231662646876 1.1101177659765253 1.0146610765617055 0.9715475127085461 0.925503164231349 1.0954603836935204 1.0 22.49909305759858 -6.409400974317098 4.731581349855039 0.9919955519664302 1.082149357297999 0.3558140700753807 0.05626941207211639 0.24571070509122578 8.555749131432288 0.019491202089381637 0.016954005800604324 3.8958212816989354e-07 6.409400974317098 0.0901538053315688 DGKS(ph)PTVPCLQEEAGEPLGGK ddPTM_KYSE-520_SHP099_60min_R1 4 DGKSPTVPCLQEEAGEPLGGK 21 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 DGKS(0.86)PT(0.14)VPCLQEEAGEPLGGK;DGKS(0.837)PT(0.163)VPCLQEEAGEPLGGK;DGKS(0.99)PT(0.01)VPCLQEEAGEPLGGK;DGKS(0.989)PT(0.011)VPCLQEEAGEPLGGK 191.18 2.1704e-13 10664700000.0 3197100.0 2853380.0 2499250.0 2593590.0 2848910.0 4054560.0 3927550.0 4869320.0 5989700.0 5262990.0 True False 3019750.4897391596 2716299.3417893047 2660355.653941385 2840084.013808736 3073103.0089194486 4029253.9870773377 4324585.083194145 4852429.465427836 4902121.468049542 5216364.003144258 0.5788994954951285 0.5207265712576818 0.5100019194093448 0.5444566391641427 0.5891274088746644 0.7724257710253026 0.8290420454913466 0.9302321430220258 0.9397583192228725 1.0 22.314613115121706 -6.5734322837703765 1.0528316371071458 0.9674970341553494 0.5246262795330693 0.9775684588074381 0.02750134747724547 0.06936340566854335 0.15705147723006904 0.018084134587990217 0.012184549378585399 2.670347101548681e-07 6.5734322837703765 -0.4428707546222801 DGKWER ddPTM_KYSE-520_SHP099_60min_R1 1 DGKWER 6 1 A0A286YFA2;A0A286YF22;A0A2C9F2M7;O43175;A0A286YFE1;A0A286YFM8;A0A286YF78;A0A286YFL2 A0A286YFA2 PHGDH D-3-phosphoglycerate dehydrogenase 0 63.306000000000004 0.057326 1913600000.0 5667200.0 5257000.0 3882300.0 3119900.0 5313200.0 4935300.0 3443500.0 3693300.0 5144800.0 4049500.0 False True 5352829.118716881 5004445.829082127 4132559.2698996263 3416414.357967865 5731318.612027344 4904496.962043422 3791602.585321393 3680488.804322702 4210634.009853795 4013624.580463329 1.333664624432551 1.2468644559936441 1.029632738950031 0.8512042642447335 1.4279657942910362 1.2219620604070678 0.9446829192190401 0.9169987701983402 1.0490851661486795 1.0 21.936474247999445 -6.764665791381918 24.993456078843657 0.9707749105881753 1.1767976933500948 0.30613409548835624 0.1526006957350067 118.23731836843808 915910.5322790069 0.06649886436756199 0.04694388865308262 1.7192309016760234e-07 6.764665791381918 0.20602278276191943 DGLAFNALIHR ddPTM_KYSE-520_SHP099_60min_R1 2 DGLAFNALIHR 11 0 O43707;Q9H254-2;Q9H254-4;M0QZQ3;C9JY79;Q9H254 O43707 ACTN4;SPTBN4 Alpha-actinin-4;Spectrin beta chain, non-erythrocytic 4 0 ; 209.85 2.4163e-09 2682200000.0 3060800.0 2424770.0 1917470.0 1645050.0 3153000.0 2276410.0 1994550.0 1914000.0 1831000.0 1711620.0 False True 2891011.3224464715 2308280.40954603 2041073.1842604754 1801395.0573976843 3401123.1618840215 2262202.0807985826 2196178.5789321302 1907360.7807309579 1498536.555753832 1696456.378420209 1.704147161826034 1.3606482541540914 1.203139208425261 1.0618575757752151 2.0048397383793914 1.3334867371627988 1.2945682582049516 1.1243205572471893 0.8833333852941825 1.0 20.694092903324766 -7.277614618663248 1.8218728633487968 0.9475512150926965 1.4343323701211843 0.3972994986016478 0.2486031304779442 0.415915706435893 2.5352662810055575 0.195418689000418 0.07663273201788108 5.2769791877603873e-08 7.277614618663248 0.48678115502848784 DGLAPEKT(ph)SPDR ddPTM_KYSE-520_SHP099_60min_R1 2 DGLAPEKTSPDR 12 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.763)S(0.237)PDR;DGLAPEKT(0.5)S(0.5)PDR 185.57 3.4325e-07 2504700000.0 3821300.0 3193600.0 2964900.0 3462300.0 3735200.0 3403900.0 3740500.0 3831900.0 3545900.0 3572000.0 True False 3609324.871427307 3040174.6623086673 3156022.198007727 3791355.951021549 4029138.9896191587 3382654.9974874086 4118626.24376206 3818608.033272182 2902053.9448648295 3540354.858973948 1.0194811015281524 0.8587203213831958 0.8914423338123776 1.0708971563715919 1.1380607735990818 0.9554564816894532 1.163337125181769 1.0785947130675133 0.8197070803534908 1.0 21.755462541955573 -5.260513385858821 24.978471747032252 1.0422337131848118 0.9167651550740237 0.195618340444921 0.09969236258883704 119.25913507840713 3216951.759667996 0.02737533785569507 0.04415430105349478 5.488916373649212e-06 5.260513385858821 -0.12546855811078816 DGLAPEKT(ph)SPDRDK ddPTM_KYSE-520_SHP099_60min_R1 4 DGLAPEKTSPDRDK 14 2 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.5)S(0.5)PDRDK;DGLAPEKT(0.5)S(0.5)PDRDK;DGLAPEKT(0.836)S(0.164)PDRDK;DGLAPEKT(0.855)S(0.145)PDRDK 230.48 1.9543e-14 26078600000.0 7469920.0 6015080.0 6192230.0 5827630.0 6183830.0 6020970.0 5948310.0 6482780.0 7172350.0 5743150.0 True False 7055548.646683659 5726106.52798085 6591391.053718304 6381486.203059152 6670462.239820264 5983390.892864586 6549623.224711228 6460292.749272227 5870032.040229916 5692270.159103094 1.2394964486006357 1.005944266159547 1.1579547121770624 1.1210792925655262 1.1718456878145256 1.0511431688279818 1.1506170722127538 1.134923777105152 1.0312286444877437 1.0 22.440572704124104 -7.854531142109973 4.158190827847423 1.002320587093532 1.1253220807712128 0.3608570802108627 0.06075732214441212 0.2200609391544869 6.461004235856131 0.05351065630501689 0.014221577528891938 1.3978766736854475e-08 7.854531142109973 0.12300149367768087 DGLAPEKT(ph)SPDRDKK ddPTM_KYSE-520_SHP099_60min_R1 1 DGLAPEKTSPDRDKK 15 3 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.888)S(0.112)PDRDKK 128.32 3.9919e-05 1734700000.0 1489900.0 1402900.0 1330500.0 1217600.0 1308800.0 1350800.0 1227200.0 1366400.0 1636400.0 1184300.0 True False 1407252.2769579852 1335502.5782041706 1416266.1588752682 1333320.337915212 1411795.1139466565 1342369.1561461822 1351257.3523178187 1361660.2773201563 1339271.0102870383 1173808.023371459 1.198877711634666 1.1377521294907202 1.2065568906297055 1.1358930177403246 1.2027478819676503 1.1436019599615406 1.1511740637422827 1.160036607527303 1.1409625625494788 1.0 20.162765043890133 -13.999999999999998 0.24697911057726565 0.014819684794740358 1.1791442589370116 0.8095679868393941 0.024450667959313884 67.31717956483317 0.6695308750656234 33.36792872290602 0.033182441042535815 1.0000000000000041e-14 13.999999999999998 1.1643245741422712 DGLAPEKTS(ph)PDR ddPTM_KYSE-520_SHP099_60min_R1 2 DGLAPEKTSPDR 12 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.093)S(0.907)PDR;DGLAPEKT(0.017)S(0.983)PDR 139.58 2.4183000000000002e-05 1911170000.0 1797950.0 1505130.0 1357730.0 1630520.0 1663470.0 1582430.0 1689170.0 1758310.0 1718540.0 1604470.0 True False 1698214.129375532 1432821.2955538116 1445251.44824481 1785484.1305662883 1794375.6251504023 1572553.4673973944 1859927.7883105362 1752210.8330026376 1406496.456867934 1590255.6440587698 1.0678875033206752 0.9010006038380455 0.9088170531853174 1.1227654731092427 1.128356709095314 0.9888683453333361 1.1695778570315203 1.1018422349569619 0.884446763086574 1.0 20.600827276198206 -5.257554434542111 24.987648749943332 1.0656757207268872 0.953411607840955 0.19320750499047123 0.08954817143560512 482.3408535003617 3102361.970748748 0.024436036056160966 0.04037128650476814 5.526441350959964e-06 5.257554434542111 -0.11226411288593219 DGLAPEKTS(ph)PDRDK ddPTM_KYSE-520_SHP099_60min_R1 6 DGLAPEKTSPDRDK 14 2 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.082)S(0.918)PDRDK;DGLAPEKT(0.122)S(0.878)PDRDK;DGLAPEKT(0.01)S(0.99)PDRDK;DGLAPEKTS(1)PDRDK;DGLAPEKT(0.292)S(0.708)PDRDK;DGLAPEKT(0.092)S(0.908)PDRDK 209.66 8.0639e-14 45990400000.0 21392680.0 17820540.0 16759580.0 16776590.0 18175360.0 17872170.0 17199900.0 19577730.0 20275190.0 17645840.0 True False 20205985.395149697 16964414.509224147 17839929.343076136 18371032.069534298 19605657.428347755 17760623.157685146 18938633.7468475 19509819.424106542 16593726.591946745 17489511.585855775 1.155320164085703 0.9699764585160693 1.0200358801044938 1.0504028073826506 1.120995136548202 1.01550138038438 1.0828566397568054 1.1155153949458854 0.9487815889247888 1.0 24.059986665163354 -7.7730691566973364 24.999948334385685 0.9743907627558253 1.0617193320030385 0.31273349878754864 0.05417162010815956 312.13653477044477 670962.2106636307 0.04969844438115161 0.013269717393818563 1.6862844814492575e-08 7.7730691566973364 0.08732856924721322 DGLAPEKTS(ph)PDRDKK ddPTM_KYSE-520_SHP099_60min_R1 1 DGLAPEKTSPDRDKK 15 3 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 DGLAPEKT(0.441)S(0.559)PDRDKK 86.96 0.0034251999999999993 4456000000.0 1107400.0 1283700.0 1073400.0 956250.0 1081600.0 1010000.0 912280.0 1061100.0 1339800.0 913660.0 True False 1045970.3144528314 1222029.125127017 1142593.081500723 1047131.712492954 1166715.7665378242 1003696.2153595216 1004502.1653948018 1057419.2917626004 1096526.0936094944 905565.6832167238 1.1550463250079954 1.3494649231695277 1.2617451198482228 1.1563288361075736 1.2883833698218894 1.1083637928882435 1.1092537891085257 1.1676892260387637 1.2108741684142077 1.0 19.788459762121718 -6.2685303193429505 24.95369441209869 1.1290928676697412 1.2444691449753333 0.405413994814944 0.07394748334578698 600.1375786603768 2111936.853225089 0.02535373260056002 0.02283456101744905 5.388522252413264e-07 6.2685303193429505 0.11537627730559219 DGLEMEK ddPTM_KYSE-520_SHP099_60min_R1 1 DGLEMEK 7 0 Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;P13693-2;H0YCX0 Q5W0H4 TPT1 Translationally-controlled tumor protein 0 100.19 0.06775199999999999 0.0 2061200.0 1832900.0 1544700.0 1442400.0 1774700.0 1813500.0 1628500.0 1769000.0 1979700.0 1796500.0 False True 1946861.1270996684 1744844.7327610115 1644273.8336073877 1579485.262326626 1914358.7933382716 1802181.2738163334 1793124.6726283964 1762863.751887705 1620236.3841757823 1780584.407655849 1.0933832278486162 0.9799281209353681 0.923446159888643 0.8870600323890452 1.075129482830043 1.012129088667533 1.0070427804032367 0.9900478428925067 0.9099464070388184 1.0 20.763919396836513 -8.817061986880809 0.002506039111627415 1.424537669905213e-08 1.9584388841031297 0.012063103431875222 0.06310091826962365 462933.29718794307 393.5627811656518 155011.74807107775 152547.16253024313 1.5238352411677109e-09 8.817061986880809 1.958438869857753 DGLGFCALIHR ddPTM_KYSE-520_SHP099_60min_R1 1 DGLGFCALIHR 11 0 P12814-3;P12814;P12814-2;P12814-4;H9KV75;G3V2N5;G3V2W4;G3V2X9 P12814-3 ACTN1 Alpha-actinin-1 0 123.11 0.0046903 0.0 110950.0 79565.0 66949.0 59805.0 97560.0 79887.0 60923.0 62323.0 57060.0 56175.0 False True 104795.38232665842 75742.5779705001 71264.63966218739 65488.84921897112 105237.41695953232 79388.3956004219 67081.69139118191 62106.81605929757 46699.342365545344 55677.333203488655 1.882191123336563 1.3603844439473656 1.2799578493052188 1.176221012231737 1.8901303439752086 1.425865626686437 1.2048294616772104 1.1154775648522988 0.8387496253613532 1.0 15.764802491126895 -7.081189921912298 1.8012986118547716 0.9503347480158508 1.4891449448053682 0.5235597715759625 0.22528366988510876 0.32620994026311534 2.03326063822964 0.1541558124272654 0.07211391405763366 8.294879436825645e-08 7.081189921912298 0.5388101967895174 DGLNDDDFEPYLS(ph)PQAR ddPTM_KYSE-520_SHP099_60min_R1 8 DGLNDDDFEPYLSPQAR 17 0 Q9Y5A9;S4R3J8 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 1 DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR;DGLNDDDFEPYLS(1)PQAR 298.68 6.507799999999999e-38 5698730000.0 4897150.0 5797740.0 4523080.0 4869720.0 5419580.0 6607960.0 6407040.0 6290080.0 6558920.0 6615910.0 True False 4625495.327273505 5519207.867814841 4814644.973983878 5332536.724665295 5846070.112807937 6566717.270541702 7054726.12988458 6268261.180595707 5367985.464918035 6557298.1845000945 0.7053965211170485 0.8416893227245553 0.7342421891632994 0.8132216310172006 0.891536414590184 1.0014364278970678 1.0758586740130696 0.9559213267763844 0.8186276289229436 1.0 22.644670070335003 -5.855457796836019 2.3577653774004226 0.9731651297329906 0.7697484464348586 0.644428233121873 0.06920299926482948 0.19602438701522093 2.225876227352408 0.024464905574811294 0.029312619150554137 1.3948972021093833e-06 5.855457796836019 -0.203416683298132 DGLNQTTIPVS(ph)PPSTTKPSR ddPTM_KYSE-520_SHP099_60min_R1 8 DGLNQTTIPVSPPSTTKPSR 20 1 X6RLN4;Q71RC2-2;Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4 X6RLN4 LARP4 La-related protein 4 1 DGLNQT(0.001)TIPVS(0.977)PPS(0.008)T(0.008)T(0.005)KPS(0.001)R;DGLNQT(0.001)TIPVS(0.774)PPS(0.075)T(0.075)T(0.075)KPS(0.001)R;DGLNQTTIPVS(0.991)PPS(0.002)T(0.003)T(0.003)KPSR;DGLNQTTIPVS(0.983)PPS(0.006)T(0.006)T(0.006)KPSR;DGLNQTTIPVS(0.99)PPS(0.003)T(0.004)T(0.004)KPSR;DGLNQTTIPVS(0.765)PPS(0.062)T(0.085)T(0.085)KPS(0.003)R;DGLNQTTIPVS(0.996)PPS(0.001)T(0.002)T(0.002)KPSR;DGLNQTTIPVS(0.903)PPS(0.023)T(0.032)T(0.032)KPS(0.009)R 189.09 4.0985e-13 58707600000.0 5414980.0 5659770.0 4903500.0 3870500.0 4089080.0 5401590.0 4140010.0 5417580.0 6256970.0 5691630.0 True False 5114600.264904989 5387866.153712028 5219587.455877402 4238351.156291743 4410867.332317384 5367876.673191929 4558522.613403922 5398787.679452679 5120861.973377959 5641206.586221138 0.9066500555745636 0.9550910911279328 0.9252608242758638 0.7513199687889603 0.7819014008618467 0.9515476150622054 0.8080758156487811 0.9570271176807146 0.9077600501080495 1.0 22.42757234006582 -7.290779239144391 24.054423339687425 0.949295228479228 0.869410041304606 0.24370310269221263 0.06950884676477032 786.7468462990918 645012.3916879784 0.040534313042662314 0.01947768729802144 5.119420001041336e-08 7.290779239144391 -0.07988518717462201 DGLPRT(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 3 DGLPRTPSR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DGLPRT(0.979)PS(0.021)R;DGLPRT(0.998)PS(0.002)R;DGLPRT(0.997)PS(0.003)R 94.402 0.009357299999999999 2580870000.0 1440990.0 1314450.0 1347820.0 1142030.0 1247350.0 1295240.0 1167300.0 1163680.0 1566050.0 1298850.0 True False 1361055.4121576524 1251301.8489703252 1434702.6337882483 1250568.1878361602 1345509.3485493313 1287155.9267151179 1285302.0757501544 1159643.4656849543 1281694.796907856 1287343.1994900082 1.0572591774259157 0.9720033084153774 1.1144678702280928 0.9714334051180628 1.0451830942070197 0.9998545277009546 0.9984144680760637 0.9008036599287251 0.9956123568412915 1.0 20.295965289702117 -6.761880443023464 2.1983770077769678 0.9610396466300104 1.029286603519642 0.2523752389730134 0.04702769017106326 0.3852221574102152 3.8095252788404874 0.021576316926942257 0.014039905671544131 1.7302926261070332e-07 6.761880443023464 0.06824695688963156 DGLPRTPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 DGLPRTPSR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DGLPRT(0.289)PS(0.711)R;DGLPRT(0.01)PS(0.99)R;DGLPRT(0.075)PS(0.925)R 97.749 0.0045092 4259700000.0 6367400.0 5372800.0 5973100.0 4526630.0 5159700.0 5030200.0 4811740.0 5085230.0 6853400.0 5266600.0 True False 6014187.628902791 5114682.623262784 6358135.583297903 4956839.554219061 5565739.0353228655 4998804.6559420535 5298157.6372569585 5067590.524031604 5608995.320154719 5219942.021352801 1.1521560209483235 0.9798351403790617 1.2180471655219893 0.9495966686876046 1.0662453744803182 0.9576360494989872 1.0149840008920037 0.9708135652277392 1.0745321111250756 1.0 22.315602351986897 -5.286078762284235 24.99985665082605 1.0046292648679918 1.1029950582617896 0.35845355733624595 0.06783378334440261 848.8815582694446 861298.9404697445 0.017700508764950686 0.026268512082777116 5.175129689116088e-06 5.286078762284235 0.0983657933937978 DGLPRTPS(ph)RR ddPTM_KYSE-520_SHP099_60min_R1 5 DGLPRTPSRR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DGLPRT(0.301)PS(0.699)RR;DGLPRT(0.306)PS(0.694)RR;DGLPRT(0.366)PS(0.634)RR;DGLPRT(0.195)PS(0.805)RR;DGLPRT(0.157)PS(0.843)RR 71.241 0.013877 21927060000.0 2456160.0 2513010.0 2704540.0 1959690.0 1980330.0 2069870.0 1915530.0 1829950.0 2926490.0 1960810.0 True False 2319911.9085664293 2392281.2274950896 2878878.975817003 2145938.3483977155 2136170.704463619 2056951.17355071 2109170.466171249 1823602.3305635387 2395113.18680941 1943438.7488870965 1.1937149600906738 1.2309527268945426 1.4813324975976645 1.1041965431771799 1.0991705839388504 1.058408027898289 1.085277561425107 0.9383379494763179 1.2324099167936027 1.0 20.890180208480913 -5.448977411958653 9.926637258248675 1.0693312137270128 1.2950449129511588 0.5268020464654235 0.0994516625811091 0.41813492283382403 54.37652167171934 0.02725760201987295 0.04041887538518391 3.5564981575043375e-06 5.448977411958653 0.22571369922414597 DGLQGQLEEMTELES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 DGLQGQLEEMTELESPK 17 0 H7BZ70;A0A669KBF3;Q53RY4-2;Q53RY4 H7BZ70 KRTCAP3 Keratinocyte-associated protein 3 1 DGLQGQLEEMTELES(1)PK;DGLQGQLEEMTELES(1)PK;DGLQGQLEEMTELES(1)PK;DGLQGQLEEMTELES(1)PK 324.29 9.895400000000001e-48 613510000.0 448631.0 526151.0 385022.0 376262.0 442389.0 539351.0 440346.0 602040.0 695470.0 495547.0 True False 423744.5441062736 500873.916191248 409841.1341769812 412021.82735270454 477202.49745090713 535984.7103469044 484860.47104281496 599951.6637571919 569190.1793719913 491156.83910973155 0.8627479256409233 1.0197840614397828 0.8344404506712301 0.8388803627361339 0.9715888275441344 1.0912699725782655 0.9871805346774172 1.2215072986556825 1.158876623613147 1.0 18.905824262469412 -6.190384275062602 2.1063158645087445 1.1070247007960194 0.8938973856887077 0.5787544664707511 0.08111350621415027 0.23911861147591584 2.0845439268867887 0.03222912123364035 0.03110292701984909 6.450831900382782e-07 6.190384275062602 -0.21312731510731175 DGNASGTTLLEALDCILPPTRPTDKPLR ddPTM_KYSE-520_SHP099_60min_R1 4 DGNASGTTLLEALDCILPPTRPTDKPLR 28 2 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ;;; 290.02 2.9544999999999994e-52 5406759000.0 3044190.0 2472764.0 1881292.0 3007886.0 3327973.0 2937240.0 2456275.0 2414208.0 2007421.0 1795486.0 False True 2875322.7122576865 2353968.705745564 2002563.0924936263 3293754.5810860973 3589865.5415238375 2918907.5956461397 2704579.2479338776 2405833.6759283813 1642923.9493653232 1779579.3909069698 1.6157316312773586 1.322766895241383 1.125301350828193 1.850861275375538 2.017255065925577 1.6402233081371587 1.5197856649460735 1.3519114057070747 0.9232091345629713 1.0 20.763104865371012 -7.570535669283685 2.3821847619929066 0.9501331052985824 1.5870828365730936 0.5223215766454172 0.2354424283894067 0.27817765211015527 2.932819463296613 0.2279087335226343 0.0729187950802471 2.688217046535472e-08 7.570535669283685 0.6369497312745112 DGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYK ddPTM_KYSE-520_SHP099_60min_R1 1 DGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYK 36 3 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 46.32 0.035634 21914000.0 85442.0 95072.0 85230.0 54514.0 99556.0 77958.0 49209.0 47254.0 71993.0 26796.0 False True 80702.36193559579 90504.59841401856 90724.06217282165 59694.994169768244 107390.49080384587 77471.43520494825 54183.52595355902 47090.0869031665 58920.88599584139 26558.60828697253 3.0386517645648525 3.4077312122718673 3.4159945879891387 2.2476702666325217 4.043528548012165 2.9169990523543126 2.0401492942737143 1.773063045862423 2.218523100276423 1.0 14.696891928715893 -7.203048720602972 0.7939142342933739 1.2613168415591527 3.265214035487612 0.6609739833452208 0.5049510877159877 0.3938734417441464 0.4612014619926886 0.46207728951649857 0.21415744408987433 6.265435729826395e-08 7.203048720602972 2.0038971939284593 DGPEETDWWWAALHGQEGYVPR ddPTM_KYSE-520_SHP099_60min_R1 3 DGPEETDWWWAALHGQEGYVPR 22 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 0 ;; 225.23 1.3895e-19 523550000.0 554931.0 405003.0 296224.0 286538.0 504454.0 450182.0 383287.0 314244.0 300044.0 360742.0 False True 524147.8712024772 385546.0479581029 315319.07301515806 313770.4853692092 544151.659849364 447372.2471514665 422033.39048063895 313153.96090910095 245563.57309372048 357546.10653302923 1.4659588277576663 1.0783114147055803 0.8818976553056932 0.8775665001968742 1.5219062658121731 1.2512295308972672 1.1803607500384081 0.8758421786370999 0.6868025370905162 1.0 18.447769767733583 -7.301199543315531 4.942028446744577 0.8282220051823634 1.1690901312649125 0.3314519742368147 0.21109081457814977 0.259280926159341 15.760081865155634 0.1258968759951437 0.06005323641971084 4.9980483915016606e-08 7.301199543315531 0.340868126082549 DGPIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 DGPISPK 7 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 DGPIS(1)PK;DGPIS(1)PK;DGPIS(1)PK;DGPIS(1)PK 101.9 0.004776600000000001 6677000000.0 6301640.0 5480740.0 5373970.0 5004190.0 5239990.0 5272420.0 5704020.0 5854250.0 6097910.0 5287120.0 True False 5952075.467192094 5217437.0236415425 5720384.70485602 5479786.71303541 5652347.401535258 5239512.871075105 6280638.007470575 5833942.973142216 4990683.259801658 5240280.230117119 1.1358315215633166 0.9956408425747365 1.091618091715712 1.0457048998146685 1.0786345678709874 0.9998535652659177 1.198530943321366 1.1132883580563455 0.9523695376287381 1.0 22.321212532955265 -7.764775348347091 24.99947664189524 0.9761847330853577 1.079576378224183 0.34409216310034996 0.05854890133380905 103.27583532527483 773877.3311751488 0.049127441290217316 0.014717332071104545 1.7187972559070567e-08 7.764775348347091 0.10339164513882526 DGPIS(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 1 DGPISPKK 8 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 DGPIS(1)PKK 44.299 0.060775 462260000.0 1191100.0 1007400.0 974880.0 778760.0 945680.0 874160.0 812690.0 908540.0 1197900.0 899480.0 True False 1125027.3086010176 959002.9918617709 1037722.3246631512 852773.1162572688 1020099.6358168352 868704.0431868125 894844.6362900654 905388.48679483 980391.5566015908 891511.306984851 1.2619327425088223 1.0757047996454259 1.1640035482811713 0.9565477292053678 1.1442363409465643 0.974417302821235 1.0037389646985946 1.0155659044380632 1.0996961551921742 1.0 19.765893570018463 -1.0000000000025 0.625629420318588 1.0271082842167207 17.875863453271442 0.5291325873709196 0.06376827755191174 148.14957854469924 1.0477118515206292 0.026030957964494218 3436.3563625235884 0.09999999999942435 1.0000000000025 16.848755169054723 DGPLNMILDDGGDLTNLIHTK ddPTM_KYSE-520_SHP099_60min_R1 2 DGPLNMILDDGGDLTNLIHTK 21 0 P23526;P23526-2 P23526 AHCY Adenosylhomocysteinase 0 ; 123.53 0.00011731 99732000.0 102858.0 112514.0 87780.0 70300.0 96439.0 101001.0 74235.0 90292.0 89706.0 73554.0 False True 97152.26169766036 107108.65855304281 93438.43925296595 76981.29086353438 104028.20063714987 100370.61529458126 81739.39826378213 89978.79812631114 73417.65170423442 72902.36878414615 1.3326351848088063 1.469206835654089 1.2816927736549175 1.05595047386547 1.4269522701678325 1.376781261960977 1.1212173160765353 1.2342369613904582 1.0070681231444476 1.0 16.15367807170961 -7.475376075939943 1.034318365283165 0.9904348050546152 1.3189391234744203 0.4976341871429917 0.11764453352582356 0.46668411011045896 0.9107781651570109 0.1130081080347114 0.04149169279200089 3.3467550244288684e-08 7.475376075939943 0.3285043184198051 DGPSS(ph)APATPTK ddPTM_KYSE-520_SHP099_60min_R1 3 DGPSSAPATPTK 12 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 DGPSS(1)APATPTK;DGPS(0.002)S(0.998)APATPTK;DGPS(0.015)S(0.985)APATPTK 281.32 8.9549e-24 0.0 4917500.0 4338100.0 3988600.0 3423190.0 3764700.0 4190600.0 3741010.0 4148000.0 4981900.0 4366100.0 True False 4644716.472206787 4129691.164379144 4245711.537985642 3748528.948380397 4060960.4717871174 4164444.9109758534 4119187.79953918 4133611.5561504783 4077312.543478981 4327419.750774402 1.0733223813972759 0.9543079715435799 0.9811184915042878 0.866227258797714 0.9384253679251704 0.9623390266753338 0.9518808058317064 0.955213913651607 0.9422040796364476 1.0 22.04507563530932 -4.064176252145508 1.9981324396299862 0.9450872720038684 1.1697878857016286 0.5476187196723827 0.033310291271810656 1.1413276489949906 3.0626765344961306 0.00882644267388791 0.5616413352458169 8.626283914400569e-05 4.064176252145508 0.22470061369776018 DGQAMLWDLNEGK ddPTM_KYSE-520_SHP099_60min_R1 2 DGQAMLWDLNEGK 13 0 P63244;H0Y8W2;J3KPE3;H0YAM7;H0YAF8;D6REE5;D6RAC2;D6R9L0;D6R9Z1;D6RFX4;H0Y8R5 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 ; 143.86 0.0015689 461610000.0 561010.0 780210.0 648040.0 407380.0 776160.0 814320.0 615770.0 635480.0 698930.0 736880.0 False True 529889.6569542915 742727.5404809136 689813.69530066 446097.2727167365 837239.3762536969 809237.5268233333 678018.0409360691 633275.6682021465 572021.9305914928 730351.8164839647 0.7255265818400625 1.0169448801490324 0.9444950772102383 0.6107977862837708 1.1463507824000585 1.1080105622508583 0.9283444302229039 0.8670830330111878 0.7832142231743897 1.0 19.47823206394759 -4.245158162193281 23.37116040642404 0.9319001200994721 0.725526188864809 0.15163360063938058 0.1478042374128898 2643.3103081884465 3794234.182326116 0.03814914478601369 0.890773878886512 5.686458026162831e-05 4.245158162193281 -0.20637393123466308 DGQDAIAQS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 8 DGQDAIAQSPEK 12 0 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK;DGQDAIAQS(1)PEK 273.94 5.6984e-22 11308100000.0 26713790.0 23321340.0 19207850.0 19958090.0 20092560.0 23460020.0 22734160.0 26702750.0 25477070.0 26676050.0 True False 25231922.81607991 22200947.82035501 20446018.744646635 21854900.872981455 21673730.160971895 23313597.31312745 25032350.75682012 26610124.392718673 20851076.312670242 26439720.95065287 0.9543188017442696 0.8396816237883481 0.7733069037607133 0.8265934770556569 0.8197412598046618 0.8817641213627019 0.9467706109130475 1.0064449788401262 0.7886269432111903 1.0 24.656203614686728 -6.553643383017591 3.7548105703934596 0.9353957781253076 0.8382787496376113 0.27806486919602746 0.0701043752937695 0.29641621483624636 9.031665686085582 0.027490826887677528 0.021551786352224916 2.7948378550587976e-07 6.553643383017591 -0.09711702848769632 DGQDAIAQS(ph)PEKESK ddPTM_KYSE-520_SHP099_60min_R1 8 DGQDAIAQSPEKESK 15 1 Q9NWH9;H7BXE3;H0YL55 Q9NWH9 SLTM SAFB-like transcription modulator 1 DGQDAIAQS(1)PEKESK;DGQDAIAQS(1)PEKESK;DGQDAIAQS(0.974)PEKES(0.026)K;DGQDAIAQS(1)PEKESK;DGQDAIAQS(0.999)PEKES(0.001)K;DGQDAIAQS(1)PEKESK;DGQDAIAQS(0.999)PEKES(0.001)K;DGQDAIAQS(1)PEKESK 330.13 2.7653999999999997e-44 19226110000.0 15944870.0 14885080.0 13914510.0 11258250.0 12505910.0 12878250.0 12729730.0 13668770.0 16216470.0 14051660.0 True False 15060376.27578969 14169978.41383941 14811461.578603175 12328230.695083704 13490053.968105627 12797872.064805705 14016575.338592494 13621356.227184903 13271967.831941739 13927173.224426052 1.0813663356592835 1.017433917529475 1.0634937427665667 0.8851926012855175 0.968613928377527 0.918913828282129 1.0064192577148137 0.9780417036312298 0.9529548902762848 1.0 23.73139913041025 -5.234250415002693 24.997152674091023 0.9584332175611198 1.0504316082976806 0.5826660409233704 0.03700136160309195 531.5132913051613 488665.2910958533 0.009823970563068106 0.017010748461797624 5.831087857161964e-06 5.234250415002693 0.0919983907365608 DGQSS(ph)PQPSPR ddPTM_KYSE-520_SHP099_60min_R1 6 DGQSSPQPSPR 11 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 DGQS(0.028)S(0.972)PQPSPR;DGQS(0.008)S(0.992)PQPSPR;DGQS(0.208)S(0.791)PQPSPR;DGQS(0.279)S(0.721)PQPSPR;DGQS(0.018)S(0.981)PQPSPR;DGQS(0.173)S(0.826)PQPS(0.001)PR 170.89 1.2080999999999998e-05 1263325000.0 1135395.0 1121500.0 955319.0 954674.0 994441.0 1097025.0 1046788.0 1165340.0 1442396.0 1184316.0 True False 1072412.3759961817 1067621.4565941799 1016900.3913044436 1045405.9299267955 1072697.8491046967 1090178.0600542368 1152607.546706378 1161297.7075324012 1180493.2462441856 1173823.8816239059 0.9136058592644851 0.9095243957016771 0.8663142803821905 0.8905986207066662 0.9138490585322662 0.9287407396636447 0.9819254530005161 0.989328744892994 1.0056817421460647 1.0 20.16278453469882 -6.662509742529561 1.4380145808374998 1.000942995273122 0.8948136784201244 0.9246446975494114 0.012995416856255467 0.10929219577410838 0.4609127844916392 0.007881541697064875 0.005087667097020882 2.175155238207491e-07 6.662509742529561 -0.10612931685299754 DGQWFTDWDAVPHSR ddPTM_KYSE-520_SHP099_60min_R1 8 DGQWFTDWDAVPHSR 15 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 0 ;;;;;;; 192.78 4.3266e-09 2735575000.0 3101616.0 2773766.0 2024583.0 1789676.0 3239151.0 2852897.0 2246322.0 2011059.0 2192556.0 2357777.0 False True 2929563.1775617916 2640510.1178523516 2155090.8596273367 1959766.2689542922 3494053.755451886 2835091.011594588 2473402.1497500543 2004083.105713699 1794443.1002388836 2336888.930102746 1.2536167807654373 1.1299253823485125 0.9222050872279085 0.8386219146787294 1.4951732238717323 1.2131903125879147 1.0584166486856978 0.8575859468107393 0.7678769312155488 1.0 21.15615773528149 -7.164004857467793 3.7124293637723786 0.8582534236853636 1.1336810854372934 0.31023556055711765 0.17671240783545358 0.3154425989089127 7.956768261758124 0.09863434199758436 0.052922869166260454 6.854805594927986e-08 7.164004857467793 0.2754276617519298 DGRHPQGEQMYR ddPTM_KYSE-520_SHP099_60min_R1 3 DGRHPQGEQMYR 12 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;; 137.95 3.9343e-05 1883150000.0 521380.0 585960.0 434652.0 301363.0 441369.0 436037.0 351567.0 330473.0 437088.0 319991.0 False True 492458.0120547378 557809.6020561093 462670.36338778917 330004.44891191 476102.22925391316 433315.5313432869 387106.8233232715 329326.6662959777 357723.83729182417 317156.12868923106 1.5527305560513958 1.7587855053013504 1.4588094680684598 1.0405110261491068 1.5011604260071771 1.3662530600752665 1.2205560236945079 1.038373963186668 1.1279108455833873 1.0 18.27483369535308 -2.100974623400773 0.18348525083579634 0.9335659366420962 3.293162878215539 0.6160471077979632 0.15250145277046756 25.919164074349002 0.4202347332849537 0.369901621183097 15.824598554482046 0.007925476390960777 2.100974623400773 2.359596941573443 DGS(ph)FGEGLTMK ddPTM_KYSE-520_SHP099_60min_R1 7 DGSFGEGLTMK 11 0 Q9ULT0;Q9ULT0-4;G5E9G4 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 DGS(1)FGEGLTMK;DGS(1)FGEGLTMK;DGS(1)FGEGLTMK;DGS(0.997)FGEGLT(0.003)MK;DGS(1)FGEGLTMK;DGS(0.989)FGEGLT(0.011)MK;DGS(1)FGEGLTMK 241.35 2.9264999999999996e-14 5699130000.0 5362960.0 4950400.0 4275690.0 4465280.0 4981750.0 4946440.0 4469000.0 4655240.0 5506120.0 4569140.0 True False 5065465.918004288 4712575.353298105 4551307.818745885 4889658.868664611 5373785.382719863 4915567.433171243 4920770.1332369065 4639092.058981183 4506347.405989774 4528660.974337128 1.118535025410184 1.0406112049462695 1.0050007815857913 1.0797140471263305 1.1866168417489982 1.0854350681198315 1.0865839066164966 1.0243849308371376 0.9950728110419834 1.0 22.110653109385623 -7.388076329174348 3.0118276528844223 0.9990978081131556 1.085093163749056 0.407590414921144 0.04463958588641795 0.31492345870549354 5.351492280650206 0.033480990662939324 0.013574072736465586 4.091887366811165e-08 7.388076329174348 0.08599535563590033 DGSYAWEIKDFLVGQDR ddPTM_KYSE-520_SHP099_60min_R1 2 DGSYAWEIKDFLVGQDR 17 1 Q14696 Q14696 MESDC2 LDLR chaperone MESD 0 ; 165.8 4.0032e-08 726400000.0 399330.0 340160.0 231430.0 288450.0 353030.0 303030.0 250100.0 246660.0 292600.0 198735.0 False True 377178.36885538057 323818.2030094302 246348.34810109256 315864.201274345 380811.45253406855 301138.6773667286 275382.5487407811 245804.39403087678 239471.2158457512 196974.36251349014 1.914860208416965 1.643961167724317 1.2506619894973436 1.6035802692480472 1.9333046578992634 1.5288216878788201 1.3980629013175307 1.2479004419371704 1.21574814503766 1.0 17.587648340252485 -7.253960779881906 1.124689707824424 1.0654137922365061 1.6456573009552726 0.6025961319780795 0.18402255047172558 0.3978270253678199 0.8893199354945044 0.17204553254329835 0.0676119733325426 5.57236069344819e-08 7.253960779881906 0.5802435087187665 DGTAPPPQSPGSPGTGQDEEWS(ph)DEESPRK ddPTM_KYSE-520_SHP099_60min_R1 1 DGTAPPPQSPGSPGTGQDEEWSDEESPRK 29 1 A0A0C4DGG1;Q9UKS6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 DGTAPPPQSPGSPGTGQDEEWS(0.993)DEES(0.007)PRK 177.98 8.734200000000001e-11 605130000.0 150760.0 200800.0 142460.0 174790.0 201020.0 149950.0 156720.0 151680.0 200160.0 156730.0 True False 142397.04226739082 191153.26659305528 151643.19954405932 191401.98904747012 216839.13035265685 149014.1064288716 172562.78703980503 151153.857482378 163815.98962298565 155341.49413409483 0.9166709967683843 1.2305357796291492 0.9761924873283178 1.2321369130275452 1.3958867304667204 0.9592678843441453 1.1108608681904677 0.9730423820431265 1.0545539717905341 1.0 17.245083721969827 DGTS(ph)PEEEIEIER ddPTM_KYSE-520_SHP099_60min_R1 1 DGTSPEEEIEIER 13 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 DGT(0.013)S(0.987)PEEEIEIER 211.82 2.4359e-12 315370000.0 813930.0 674520.0 583200.0 532990.0 622250.0 640440.0 557830.0 713750.0 751850.0 635820.0 True False 768779.6803707716 642115.0467248388 620794.0051529934 583645.2093507132 671217.5348818065 636442.7764008447 614220.9002961621 711274.1678405025 615332.9925961313 630187.1294604741 1.2199228521676593 1.0189275799310225 0.9850947062096895 0.926145873290673 1.0651082884800582 1.0099266497964283 0.9746643045884145 1.1286713653600795 0.9764290062904648 1.0 19.265420764410862 -4.2624719573149905 5.530229625123719 1.0102625633771591 1.227315413405743 0.5943665093178605 0.052208389742185786 0.10090858931539455 12.206965089720024 0.013017149991754243 0.08310537594207529 5.46421831565692e-05 4.2624719573149905 0.21705285002858377 DGVLTLANNVT(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 4 DGVLTLANNVTPAK 14 0 E7EVA0;P27816-6;P27816 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DGVLTLANNVT(1)PAK;DGVLTLANNVT(1)PAK;DGVLTLANNVT(1)PAK;DGVLTLANNVT(1)PAK 270.79 2.9271999999999998e-24 2845080000.0 3392440.0 3865680.0 2614890.0 3160930.0 2809160.0 3827640.0 3020340.0 3969640.0 3784740.0 4316010.0 True False 3204254.590538525 3679966.9302960252 2783449.99337193 3461343.8368317457 3030224.9100660095 3803750.278969033 3325665.442877775 3955870.2453609374 3097526.621531265 4277773.509204974 0.7490472750938225 0.8602528680813558 0.6506772711043403 0.8091461199111117 0.7083649715314586 0.8891892641777478 0.777429061104231 0.9247498112858568 0.7240978548457422 1.0 22.028428668985413 -6.266616263993852 24.94348598088027 0.8530360531431693 0.7584745429675003 0.2680298202972591 0.08805471656383243 641.8571755780943 3092612.3713541864 0.028454430923450624 0.025829727631585565 5.412323364014867e-07 6.266616263993852 -0.09456151017566905 DGVLTLANNVT(ph)PAKDVPPLSETEATPVPIK ddPTM_KYSE-520_SHP099_60min_R1 3 DGVLTLANNVTPAKDVPPLSETEATPVPIK 30 1 E7EVA0;P27816-6;P27816 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DGVLTLANNVT(1)PAKDVPPLSETEATPVPIK;DGVLTLANNVT(1)PAKDVPPLSETEATPVPIK;DGVLTLANNVT(1)PAKDVPPLSETEATPVPIK 228.34 1.5988e-22 796450000.0 889160.0 1240080.0 818890.0 854890.0 913150.0 1106040.0 904490.0 1216030.0 1212370.0 1154820.0 True False 839836.5223034832 1180504.6954019717 871676.9596703264 936138.4885679497 985009.7098872184 1099136.7940952936 995924.6761717288 1211811.8757535354 992234.1693606069 1144589.1932363648 0.7337449342229215 1.0313785088814744 0.7615631571757464 0.8178816418150746 0.8605792503614944 0.9602893340163793 0.8701153934152724 1.0587308380285299 0.8668910865347516 1.0 20.126398460025506 -6.199720371403972 4.4521265511940875 0.9500795544945014 0.8443018185001683 0.26933718056888234 0.09087812101873316 0.32627390154156644 13.195319758483562 0.02962106578777026 0.02919554831540338 6.313637289405209e-07 6.199720371403972 -0.10577773599433316 DGVLTLANNVT(ph)PAKDVPPLSETEATPVPIKDMEIAQTQK ddPTM_KYSE-520_SHP099_60min_R1 1 DGVLTLANNVTPAKDVPPLSETEATPVPIKDMEIAQTQK 39 2 E7EVA0;P27816-6;P27816 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DGVLTLANNVT(1)PAKDVPPLSETEATPVPIKDMEIAQTQK 248.87 1.1106e-31 354680000.0 246280.0 386950.0 287870.0 245480.0 275910.0 307710.0 180450.0 267620.0 396490.0 264090.0 True False 232618.3574529919 368360.3411762088 306426.5608082855 268810.3453937465 297622.5472868445 305789.46775077126 198691.64702228695 266691.68868297746 324497.41069952806 261750.3680589108 0.8887030768210332 1.4072963637373141 1.1706824448068003 1.0269721772969838 1.1370472924028903 1.1682484728424483 0.7590883195150597 1.0188779892105235 1.2397209337504929 1.0 17.997832040232407 DGVTKS(ph)PEKR ddPTM_KYSE-520_SHP099_60min_R1 3 DGVTKSPEKR 10 2 P11137-4;H7BZB9 P11137-4 MAP2 Microtubule-associated protein 2 1 DGVT(0.069)KS(0.931)PEKR;DGVT(0.379)KS(0.621)PEKR;DGVT(0.069)KS(0.931)PEKR 70.889 0.017186 2902310000.0 3195680.0 3054140.0 2853010.0 2350770.0 3146290.0 2553520.0 2442250.0 2544720.0 3604970.0 2681810.0 True False 3018409.2599698543 2907414.5300423983 3036919.5895773983 2574186.4740152285 3393885.1230587023 2537582.5344998487 2689136.4640630637 2535892.9602621114 2950398.3218983524 2658051.249816607 1.135572258126366 1.09381432364895 1.1425361304778947 0.9684487739628177 1.2768320863989602 0.9546778056574078 1.0116947384850465 0.9540421616916062 1.1099854911006384 1.0 21.34193749077177 DGWGGYGSDKR ddPTM_KYSE-520_SHP099_60min_R1 1 DGWGGYGSDKR 11 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 0 110.39 0.00080705 0.0 359940.0 344100.0 218350.0 213880.0 315390.0 347980.0 261100.0 263910.0 288000.0 277510.0 False True 339973.41067739925 327568.9194953703 232425.1903723526 234207.09089463303 340209.3986763728 345808.12774337287 287494.53609043563 262994.55780705705 235706.4598891882 275051.47729951306 1.2360355741961366 1.1909367755864448 0.8450243301884061 0.851502755753596 1.2368935517692456 1.2572487562639427 1.0452390182124813 0.9561648618984627 0.8569539862260739 1.0 18.069342126145585 -7.230927794380051 3.6685080767671265 0.9256778325486043 1.093326592119274 0.2033280755593757 0.14455877100127149 0.42959666584655215 12.43764779320028 0.08831687100323705 0.0445084011454066 5.875870363854198e-08 7.230927794380051 0.16764875957066983 DGWHYGESEK ddPTM_KYSE-520_SHP099_60min_R1 2 DGWHYGESEK 10 0 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;Q9UQB8-6;I3L3C6 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 0 ; 154.24 0.00020452 721490000.0 1657400.0 1577020.0 1319730.0 1633710.0 1586100.0 1480830.0 1349180.0 1358970.0 1656980.0 1139980.0 False True 1565460.718055014 1501257.592044721 1404801.9074426584 1788977.307207178 1710917.0463254827 1471587.5906840018 1485568.2811278964 1354256.0502559822 1356114.2010666209 1129880.6640910204 1.3855097868361295 1.3286868602645485 1.243318831881073 1.5833329696339176 1.5142457966584473 1.3024274487145788 1.3148010478814802 1.1985832604237634 1.2002278153486268 1.0 20.107738975225118 -7.669971643694026 0.8583564387211405 1.0148762647725675 1.4007446755419435 0.6389905097545133 0.09452223279752073 0.3920962449520922 0.6000535210767867 0.09749623821641089 0.03707416628430473 2.138101687606555e-08 7.669971643694026 0.38586841076937595 DGWNQNHFITPVS(ph)TLER ddPTM_KYSE-520_SHP099_60min_R1 2 DGWNQNHFITPVSTLER 17 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 DGWNQNHFITPVS(0.582)T(0.418)LER;DGWNQNHFITPVS(0.552)T(0.448)LER 129.85 2.8103000000000002e-05 1977710000.0 1180620.0 1199130.0 1044700.0 1241610.0 1273090.0 1119140.0 976770.0 1105140.0 1404620.0 1037010.0 True False 1115128.6550923777 1141521.9948691747 1112043.0335790995 1359612.2410963424 1373274.9401087621 1112155.0321360943 1075511.4439565495 1101306.5272816143 1149576.415588719 1027822.8981815716 1.0849424128079534 1.1106212917505145 1.0819403182654623 1.3228078918087678 1.3361007451170486 1.0820492850506866 1.0463976292602049 1.0714944463973806 1.1184576813987646 1.0 19.971160267779542 -6.4912593072652935 24.921215184213843 1.0649278611479949 1.1871378890255955 0.33780942243390555 0.0868499133029852 872.8554960887896 687952.0325462143 0.034065970109811924 0.030011030064845224 3.2265670373534266e-07 6.4912593072652935 0.1222100278776006 DGWNQNHFITPVST(ph)LER ddPTM_KYSE-520_SHP099_60min_R1 2 DGWNQNHFITPVSTLER 17 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 DGWNQNHFITPVS(0.198)T(0.802)LER;DGWNQNHFIT(0.007)PVS(0.236)T(0.757)LER 210.29 8.7624e-18 1749500000.0 1238910.0 1211960.0 1269660.0 1443970.0 1244350.0 1195540.0 1120100.0 1228750.0 1486240.0 1201270.0 True False 1170185.1925941457 1153735.6224109516 1351504.3151278277 1581204.4746545905 1342273.2656169934 1188078.1913969556 1233330.6391225483 1224487.7530424055 1216376.281061482 1190627.6823739184 0.9828304934595392 0.9690146126206222 1.1351191771664064 1.3280427610266254 1.1273660821834064 0.9978587000666074 1.035865919616019 1.0284388404282485 1.0216260709109544 1.0 20.18329091219213 -6.2580529291614395 24.207933405871977 1.019729582811174 1.1144053335057302 0.19502116715920426 0.09267999739123363 374.4084587923599 2676455.4237494287 0.035571161329205264 0.03420684521947119 5.520101595510754e-07 6.2580529291614395 0.09467575069455614 DGWPAMCIHGDK ddPTM_KYSE-520_SHP099_60min_R1 1 DGWPAMCIHGDK 12 0 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 87.49799999999999 0.0052807999999999996 666950000.0 395070.0 396750.0 301400.0 236540.0 392020.0 359750.0 259500.0 276170.0 285180.0 292400.0 False True 373154.67954747996 377689.5344661084 320828.72625705076 259020.6904816557 422869.7437113142 357504.6668075132 285732.7924759407 275212.03072856227 233398.5008027729 289809.5634837577 1.2875858031109912 1.3032335093637306 1.1070329163758996 0.893761708095504 1.4591297078952807 1.2335847806746014 0.985932931409127 0.9496306036980952 0.805351272736221 1.0 18.144745677899426 -6.864003258465812 3.9857540972984693 0.9180326739259744 1.2098278411519525 0.47494740813266056 0.1446075540068362 0.21719977406504218 6.380619079887151 0.0672387005133929 0.04437337928598375 1.3677185637088471e-07 6.864003258465812 0.2917951672259781 DGWPAMGIHGDK ddPTM_KYSE-520_SHP099_60min_R1 5 DGWPAMGIHGDK 12 0 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ;;;; 144.47 4.8273000000000004e-05 2817060000.0 2718630.0 2525480.0 1715400.0 1594110.0 2559090.0 2523880.0 1863870.0 2207850.0 2084890.0 2200390.0 False True 2567822.1744454536 2404152.1499772356 1825977.4287370448 1745613.735113351 2760475.823769676 2508127.5287342486 2052288.1692182324 2200191.483666062 1706326.5317998906 2180896.2564775134 1.1774160127143718 1.102368873730984 0.8372601050204389 0.8004111749601462 1.2657529286735876 1.1500444009130744 0.9410297088285148 1.0088473842491312 0.782396928204129 1.0 21.056489713064778 -7.294574243662117 2.197111268665713 0.9035900079151933 1.042093822519366 0.1246450352204922 0.1484904824937907 0.7797005984305511 7.094974513543889 0.11333990514715189 0.045938118313670964 5.074879753510853e-08 7.294574243662117 0.13850381460417283 DGWQVEEADDWLR ddPTM_KYSE-520_SHP099_60min_R1 4 DGWQVEEADDWLR 13 0 E9PK47;P06737-2;P06737 E9PK47 PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form 0 ;;; 198.57 9.6608e-08 1032840000.0 1584520.0 1643020.0 1543520.0 1051933.0 1651660.0 1513550.0 1264150.0 1274690.0 1546120.0 1378760.0 False True 1496623.516937691 1564086.8529767024 1643017.768919321 1151908.396044811 1781636.2453401117 1504103.373027135 1391942.6189150698 1270268.397904883 1265383.5825134404 1366545.259059047 1.0951876690627949 1.1445554712572603 1.2023149310478327 0.8429346839474404 1.3037520956802273 1.1006612207361544 1.0185850850439526 0.9295472575709224 0.9259726848598758 1.0 20.38210181106511 -6.92656256340991 3.017326469361309 0.94798692000365 1.1166052020553037 0.30881293546049915 0.11060446426592647 0.3157923782456524 5.794481800830915 0.05240556940026383 0.03217859364608271 1.1842337568653418e-07 6.92656256340991 0.16861828205165363 DGWSLWYSEYR ddPTM_KYSE-520_SHP099_60min_R1 5 DGWSLWYSEYR 11 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ;;;; 254.97 2.6526e-14 4769077000.0 3583583.0 2988542.0 1803184.0 2446912.0 3180386.0 3461657.0 3140511.0 2570905.0 1715760.0 2432519.0 False True 3384794.507294397 2844967.956427002 1919420.1258364082 2679465.78078908 3430664.2842790023 3440051.5146265365 3457984.5003137095 2561987.130608739 1404221.234789836 2410968.7741311444 1.4039147016801146 1.1800102875460345 0.7961198612072947 1.111364779809185 1.422940156292705 1.426833707486008 1.4342717904174784 1.062638039155865 0.5824302868857701 1.0 21.20118153519706 -7.546978068752268 7.320031719245523 0.7974639726753009 1.2416564609650702 0.43632003463418056 0.20910126414182728 0.18719313965428744 39.458387520978214 0.15257732668231086 0.058381596750027034 2.8380623428960765e-08 7.546978068752268 0.4441924882897693 DGYGGS(ph)RDSYSSSR ddPTM_KYSE-520_SHP099_60min_R1 2 DGYGGSRDSYSSSR 14 1 P38159;P38159-2;H3BUY5;Q96E39 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DGYGGS(0.509)RDS(0.483)YS(0.005)S(0.001)S(0.002)R;DGYGGS(0.516)RDS(0.394)YS(0.009)S(0.063)S(0.018)R 114.69 0.00022174 2574540000.0 1683650.0 1544600.0 1546280.0 1392770.0 1541710.0 1592420.0 1474550.0 1660600.0 1891920.0 1367490.0 True False 1590254.578226933 1470395.0975081313 1645955.6829354754 1525138.442048431 1663033.8058700336 1582481.1161017946 1623611.9042211866 1654839.766186955 1548395.0194220569 1355375.102491121 1.1732948135937524 1.0848621129350897 1.2143912632822307 1.1252519241686616 1.2269915559268052 1.1675595288664093 1.197905953294448 1.2209459677586159 1.1424106998691164 1.0 20.370260744603367 -8.02797595114418 22.687010923778377 0.9999999985777529 1.1754352688869945 0.6134703669415611 0.04188108057226127 585.7592264516976 475019.79298684 0.03974190443277963 0.010261315596518734 9.37613925425311e-09 8.02797595114418 0.17543527030924155 DGYGGSRDS(ph)YSSSR ddPTM_KYSE-520_SHP099_60min_R1 7 DGYGGSRDSYSSSR 14 1 P38159;P38159-2;H3BUY5;Q96E39 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DGYGGSRDS(0.42)Y(0.213)S(0.345)S(0.015)S(0.006)R;DGY(0.002)GGS(0.111)RDS(0.88)Y(0.003)S(0.003)S(0.001)S(0.001)R;DGYGGSRDS(0.988)YS(0.008)S(0.002)S(0.001)R;DGYGGSRDS(0.997)YS(0.003)SSR;DGYGGS(0.162)RDS(0.823)YS(0.006)S(0.001)S(0.007)R;DGYGGS(0.084)RDS(0.898)YS(0.013)S(0.002)S(0.002)R;DGYGGS(0.08)RDS(0.888)YS(0.025)S(0.004)S(0.004)R 145.54 2.7772000000000003e-06 3860213000.0 2940431.0 2821826.0 2842382.0 2758651.0 2736542.0 2897532.0 2621986.0 2906718.0 3650974.0 2833016.0 True False 2777319.430826126 2686261.2433128213 3025606.491691996 3020832.3616213347 2951892.2866059076 2879447.4280030807 2887041.932997388 2896635.2736910814 2988049.1551648183 2807917.682293098 0.9891028673454616 0.9566737872169652 1.0775267775019393 1.0758265388871227 1.051274510367851 1.0254743029544824 1.0281789780388693 1.0315955100669232 1.0641512655472918 1.0 21.421069211131783 -4.7537589731728565 24.99722059575171 1.0455154827869606 0.9728883057791127 0.583084558854396 0.024119286611724744 118.217168773513 384749.1276747004 0.006339649649682315 0.016114543721800195 1.7629541877003467e-05 4.7537589731728565 -0.07262717700784793 DGYGGSRDSY(ph)SSSR ddPTM_KYSE-520_SHP099_60min_R1 1 DGYGGSRDSYSSSR 14 1 P38159;P38159-2;H3BUY5;Q96E39 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DGYGGSRDS(0.238)Y(0.564)S(0.167)S(0.029)S(0.001)R 68.972 0.022203 485530000.0 645490.0 634590.0 577790.0 636000.0 568640.0 562080.0 529250.0 638470.0 768580.0 559100.0 True False 609683.3829475861 604103.34386099 615035.2678966863 696445.2487796281 613388.7328809809 558571.8502270111 582751.7549822414 636255.2965900176 629025.2463251118 554146.8089732185 1.1002199653143752 1.090150361021362 1.1098778481397165 1.2567883411077925 1.106906550662147 1.0079853229904756 1.0516197973999437 1.1481710014155604 1.1351238266455705 1.0 19.079908711576252 -5.999735080940989 24.999999798185094 1.0746323564041567 1.139677032652598 0.22285449894898535 0.061823413987625524 16.986372001148975 1602657.3331143588 0.020587397646618627 0.023119288518803446 1.0006101847631562e-06 5.999735080940989 0.06504467624844135 DGYGGSRDSYS(ph)SSR ddPTM_KYSE-520_SHP099_60min_R1 1 DGYGGSRDSYSSSR 14 1 P38159;P38159-2;H3BUY5;Q96E39 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DGYGGS(0.001)RDS(0.232)YS(0.679)S(0.068)S(0.02)R 204.67 2.5776999999999997e-11 811270000.0 599820.0 601780.0 605510.0 605250.0 509750.0 553500.0 602350.0 627560.0 740890.0 547890.0 True False 566546.7888884738 572869.5855098052 644542.143450254 662772.7780249524 549864.4249192454 550045.4011896005 663241.416369491 625383.1408336046 606363.052317016 543036.1208519699 1.0432948511778883 1.0549382693199663 1.1869231505982165 1.2204948300402696 1.0125743091574877 1.0129075766205637 1.2213578266744594 1.1516418831447903 1.1166164257465827 1.0 19.05068863865584 -6.757002291917365 24.990959957842257 1.1350408470342639 1.0940149971138877 0.027578334665506743 0.08260830267286669 408.26445187453317 2299476.4814725197 0.034048682452299465 0.025450529213378544 1.7498374541222714e-07 6.757002291917365 -0.04102584992037617 DGYNYTLSK ddPTM_KYSE-520_SHP099_60min_R1 1 DGYNYTLSK 9 0 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 0 91.65799999999999 0.029318 381820000.0 281150.0 344650.0 257140.0 204200.0 292390.0 294700.0 293220.0 330490.0 344380.0 307900.0 False True 265554.0490413698 328092.4966698034 273715.6558385467 223607.10660503144 315399.4295284715 292860.6679865857 322861.53915142716 329343.6073269458 281849.2731133286 305172.245542575 0.8701775896075779 1.075105949056664 0.8969218526144123 0.7327242561245161 1.0335128247580747 0.9596569552578407 1.0579649488681444 1.0792056359561657 0.923574398491646 1.0 18.219264233991805 DGYWFLK ddPTM_KYSE-520_SHP099_60min_R1 1 DGYWFLK 7 0 Q9Y2H0-3;Q9Y2H0;F8WF49;A0A0B4J2C2;Q9Y2H0-1;A0A087X246 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 0 107.66 0.047129000000000004 0.0 188460.0 207050.0 131440.0 113430.0 209730.0 196450.0 148980.0 148930.0 140890.0 164130.0 False True 178005.7481143043 197103.00721161414 139912.83271143565 124210.35309602709 226234.55779953598 195223.88268057257 164040.35230468455 148413.39659052325 115307.92754787399 162675.9358912077 1.0942352791094356 1.2116297726015859 0.860070863861541 0.7635447272244057 1.3907069694120844 1.2000784357628154 1.0083873278859716 0.9123254510721072 0.7088198196996275 1.0 17.31164132816336 -7.243263498150567 3.0742986748978973 0.8479394690648272 1.0814174620109311 0.21688359183330952 0.1796536898497995 0.4209906392586402 8.067029300542602 0.11298529258306979 0.053517624909054186 5.7113201036688006e-08 7.243263498150567 0.23347799294610394 DHAEEGT(ph)SEDGTKPDEK ddPTM_KYSE-520_SHP099_60min_R1 1 DHAEEGTSEDGTKPDEK 17 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 DHAEEGT(0.543)S(0.457)EDGTKPDEK 90.96799999999999 0.0030074999999999998 28551000.0 44834.0 48445.0 62412.0 38931.0 39461.0 48814.0 34896.0 43178.0 48179.0 51060.0 True False 42346.968645636785 46117.62948257252 66435.17738273069 42630.99053496807 42566.35619762305 48509.3337193661 38423.62823214035 43028.22559582097 39430.908093754115 50607.648124078885 0.8367701368340864 0.9112778639604469 1.312749749204827 0.8423823693692741 0.8411052039656072 0.958537602862552 0.759245482776319 0.8502316782302385 0.779149190989436 1.0 15.627067809466745 DHALLEEQSK ddPTM_KYSE-520_SHP099_60min_R1 5 DHALLEEQSK 10 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ;;;; 180.07 2.4376e-05 1639330000.0 2706580.0 2839870.0 1901260.0 1815940.0 2968930.0 2786690.0 2001470.0 2389050.0 2436720.0 2343390.0 False True 2556440.6119665354 2703438.3824682226 2023818.2617235584 1988526.3916177314 3202567.90009906 2769297.234039831 2203798.1200648225 2380762.9431584603 1994273.07271244 2322629.3877298296 1.1006666089182813 1.1639559874468828 0.8713479095783192 0.8561531177220421 1.3788544642627185 1.192311286798356 0.9488376112466421 1.0250291999816 0.8586273312685802 1.0 21.14732753701357 -6.792668974658892 24.817363316275006 0.9602091806983644 1.0890991068444738 0.16801909202965493 0.14773654048472887 409.09220438738885 325091.17350268946 0.06723489937391357 0.045334624760846244 1.6118737598434097e-07 6.792668974658892 0.1288899261461094 DHAPS(ph)IPT(ph)SPFGDSLESSTELRR ddPTM_KYSE-520_SHP099_60min_R1 2 DHAPSIPTSPFGDSLESSTELRR 23 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 DHAPS(0.992)IPT(0.542)S(0.466)PFGDSLESSTELRR;DHAPS(1)IPT(0.532)S(0.469)PFGDSLESSTELRR 91.72200000000001 0.0035397 698250000.0 344820.0 381180.0 365210.0 350600.0 347280.0 409800.0 378130.0 408060.0 515910.0 376790.0 True False 325692.1472183716 362867.5406371557 388752.0209566605 383920.91858826665 374608.96024709276 407242.2861924083 416355.0705931689 406644.53510192037 422233.7490327469 373451.9337381842 0.8721126276098077 0.9716579507432704 1.040969361345449 1.0280330181860082 1.0030981939156853 1.0904811286314384 1.1148826207044433 1.0888805181204564 1.1306240800690621 1.0 18.510563042966744 -2.7630864104364647 0.5080008136073438 1.0864934571254734 5.901336457751614e-13 0.7056820622288961 0.04000232390720471 9.633974057031883 0.5772279378402067 0.022478624721456626 8.67689968196976 0.0017254945407005407 2.7630864104364647 -1.0864934571248832 DHAPSIPT(ph)SPFGDSLESSTELRR ddPTM_KYSE-520_SHP099_60min_R1 1 DHAPSIPTSPFGDSLESSTELRR 23 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPSIPT(0.549)S(0.451)PFGDSLESSTELRR 143.9 5.467899999999999e-07 758540000.0 215210.0 260100.0 257190.0 336890.0 234050.0 245050.0 296290.0 352210.0 393970.0 275250.0 True False 203271.8722895012 247604.40558194078 273768.87891854986 368907.92431032803 252468.40343766467 243520.55205331792 326241.8847117393 350988.2657164316 322434.9791754981 272811.49914125964 0.7451000889967934 0.9076025254116329 1.0035093087362659 1.352244775134315 0.9254316780354575 0.89263301884216 1.19585092907984 1.2865596458406345 1.1818965849696235 1.0 18.05754493039872 -4.660109646045906 2.1517695572630733 1.118633774114303 0.7590512728298363 0.41216432606031617 0.14223496942752592 0.37030752295564434 3.1274458640551517 0.04193538433085955 0.18745320263558923 2.187209350911571e-05 4.660109646045906 -0.3595825012844668 DHAPSIPTS(ph)PFGDSLESSTELR ddPTM_KYSE-520_SHP099_60min_R1 2 DHAPSIPTSPFGDSLESSTELR 22 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPS(0.009)IPT(0.188)S(0.803)PFGDSLESSTELR;DHAPSIPT(0.006)S(0.994)PFGDSLESSTELR 309.0 2.7399000000000003e-54 481210000.0 278804.0 298349.0 297020.0 315114.0 293370.0 340033.0 313228.0 358404.0 362943.0 387636.0 True False 263338.1863380052 284015.86620902084 316166.38444880256 345062.3398175214 316456.54995303386 337910.7279181632 344892.1430506892 357160.7801761226 297041.70024847746 384201.84661624435 0.6854162431994699 0.7392360778856611 0.8229173993653439 0.8981277494019517 0.8236726417120085 0.8795135444928808 0.8976847615081371 0.9296175521323524 0.773139699521471 1.0 18.551504927583135 -3.02589671997917 0.4962998153049528 0.8976667827496964 1.84787972446954e-13 0.605705379746042 0.05642068776670683 9.290786180529164 0.6832421559152188 0.03117756604505302 6.339973532979997 0.0009421136148998995 3.02589671997917 -0.8976667827495116 DHAPSIPTS(ph)PFGDSLESSTELRR ddPTM_KYSE-520_SHP099_60min_R1 5 DHAPSIPTSPFGDSLESSTELRR 23 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 DHAPSIPT(0.022)S(0.977)PFGDSLESSTELRR;DHAPSIPT(0.119)S(0.881)PFGDSLESSTELRR;DHAPSIPT(0.102)S(0.898)PFGDSLESSTELRR;DHAPSIPT(0.119)S(0.881)PFGDSLESSTELRR;DHAPSIPT(0.124)S(0.876)PFGDSLESSTELRR 216.3 4.4457e-21 6502130000.0 1072922.0 1256500.0 1229250.0 1532610.0 1110230.0 1390400.0 1335910.0 1432640.0 1813070.0 1325550.0 True False 1013404.8778430193 1196135.8539550488 1308489.4218695404 1678268.7936040033 1197598.7846554066 1381721.9978573064 1470956.8200251795 1427670.5062206904 1483862.1917753108 1313806.6582622952 0.771350085242678 0.9104352200019419 0.995952801457265 1.2774092618953259 0.9115487253196062 1.0516935571668051 1.1196143745920262 1.0866671265839047 1.1294372596177427 1.0 20.325321551461368 -4.627797061531807 2.1585204661459976 1.0809897740978236 0.7789073395052722 0.5410433781403763 0.09086257577197723 0.26947276291644384 2.2469338281131086 0.0245393879814103 0.11755069846632837 2.3561500157630553e-05 4.627797061531807 -0.30208243459255135 DHEEQDKVRPK ddPTM_KYSE-520_SHP099_60min_R1 2 DHEEQDKVRPK 11 2 G3V4A5;A0A087WYL7;O75586;O75586-2 G3V4A5 MED6 Mediator of RNA polymerase II transcription subunit 6 0 ; 234.3 6.0154e-14 1741390000.0 2391000.0 3127800.0 2382400.0 1951040.0 2892900.0 3075500.0 2179200.0 2809300.0 2749100.0 1952290.0 False True 2258366.463659666 2977535.793076485 2535973.3159747752 2136466.2549984357 3120554.7716505807 3056304.6637012 2399494.802942464 2799555.1939955493 2249932.7391714132 1934994.2294586347 1.1671179320733702 1.5387827765819893 1.3105844334658714 1.1041202203461702 1.6126946138354312 1.5794903246591496 1.2400526918438333 1.4468028645123134 1.1627594051279888 1.0 20.88389783329395 -9.341847723321942 7.983238194210617 1.0000000000446734 1.3623454033112024 0.26175076030389943 0.17616842512355638 0.0 0.0 0.1688034079978096 0.04094084006701189 4.551476205893356e-10 9.341847723321942 0.362345403266529 DHENIVIAK ddPTM_KYSE-520_SHP099_60min_R1 4 DHENIVIAK 9 0 H7BZ94;P07237;H0Y3Z3 H7BZ94 P4HB Protein disulfide-isomerase 0 ;;; 98.04799999999999 0.003757 1540650000.0 4153580.0 4280340.0 2773840.0 2954680.0 4557760.0 4812840.0 3450780.0 4510370.0 3441850.0 4011120.0 False True 3923172.637443549 4074706.041478671 2952646.1647009184 3235491.898843067 4916429.781892963 4782801.280327644 3799618.5187673485 4494724.579198271 2816896.801977781 3975584.5974041433 0.9868165401398283 1.0249325455529859 0.7426948395536213 0.8138405357933223 1.2366558078283993 1.203043518040233 0.9557383136176522 1.13058204877167 0.7085490782455172 1.0 21.922735589158517 DHFEEAMR ddPTM_KYSE-520_SHP099_60min_R1 6 DHFEEAMR 8 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ;;;;; 217.02 1.3046e-08 4086730000.0 3878570.0 3601640.0 2510350.0 2341340.0 3842080.0 3694360.0 2893850.0 3252090.0 3027210.0 3119300.0 False True 3663417.9903623965 3428611.8082281407 2672171.1777020143 2563860.2496504593 4144429.837555142 3671302.1288867407 3186388.5992543385 3240809.258833514 2477544.973753987 3091665.4287786763 1.184933517146318 1.108985395480704 0.8643144736258289 0.8292812753232746 1.3405169262420311 1.1874836438356275 1.030638234523676 1.0482406112467852 0.8013625765232656 1.0 21.55995277268841 -7.63233259095251 7.137351733496687 0.9023709280275071 1.0731476078428954 0.17936705989034285 0.1493468039174234 0.4123781429523364 24.129363602289306 0.11038649573246638 0.04089436115639594 2.331671739919887e-08 7.63233259095251 0.17077667981538835 DHFFDR ddPTM_KYSE-520_SHP099_60min_R1 2 DHFFDR 6 0 O43776 O43776 NARS Asparagine--tRNA ligase, cytoplasmic 0 ; 144.29 0.051963 1162570000.0 1053780.0 947030.0 711770.0 625730.0 951910.0 934600.0 709220.0 782590.0 773280.0 747320.0 False True 995324.7227416504 901533.2572789901 757651.8330722664 685199.1910674147 1026819.901372984 928766.8147277315 780914.8789201797 779875.3779478782 632871.8448024692 740699.3262061628 1.3437635050104209 1.2171379470487889 1.022887163881914 0.925070628289865 1.3862843734883914 1.253905305253677 1.0542940317226959 1.0528906269462588 0.8544247610484779 1.0 19.498528499259198 -7.230992980272142 2.0584442315122327 0.9422823852902562 1.178742306450683 0.3489821607745075 0.13710042264504746 0.43647357418790705 3.487389233422805 0.10201043398330949 0.04317422163729148 5.874988485028444e-08 7.230992980272142 0.2364599211604268 DHFGLEGDEESTMLEDSVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 DHFGLEGDEESTMLEDSVSPK 21 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 DHFGLEGDEESTMLEDS(0.001)VS(0.999)PK;DHFGLEGDEESTMLEDS(0.001)VS(0.999)PK;DHFGLEGDEESTMLEDSVS(1)PK 176.14 1.1717000000000002e-09 729570000.0 446787.0 480055.0 405625.0 453954.0 511891.0 422022.0 420993.0 511989.0 538782.0 449172.0 True False 422002.83446219686 456992.4372227545 431772.2365229473 497097.6516737529 552173.9094386214 419388.0041568875 463551.0809357367 510213.0296581305 440952.770388946 445192.6855305283 0.9479105299299864 1.0265048193192228 0.9698547405566916 1.1165898897942816 1.240303193168157 0.9420370499958016 1.0412369654800842 1.1460498930931864 0.9904762246115304 1.0 18.76407036398209 -5.2510260633773855 24.595332777927965 1.0749877815305529 0.9859315019817678 0.1822169302644412 0.0830905432436468 988.2674899879498 2334193.8831632053 0.022922930684909935 0.039138959521696576 5.610143067896674e-06 5.2510260633773855 -0.08905627954878503 DHFGLEGDEESTMLEDSVS(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 3 DHFGLEGDEESTMLEDSVSPKK 22 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 DHFGLEGDEESTMLEDS(0.027)VS(0.973)PKK;DHFGLEGDEESTMLEDS(0.001)VS(0.999)PKK;DHFGLEGDEESTMLEDSVS(1)PKK 325.25 6.0792e-55 1045250000.0 911170.0 1007800.0 983290.0 992040.0 1020780.0 969120.0 893200.0 1012700.0 1158670.0 963320.0 True False 860625.5837276378 959383.7752613592 1046674.4467196261 1086323.1833322973 1101109.5785562873 963071.3626031892 983493.3727919464 1009187.1800659562 948284.7356937692 954785.7342516182 0.901380857352477 1.004815783106924 1.0962401397210153 1.137766458339243 1.1532530693070744 1.0086779976431732 1.0300671004084805 1.0569776483484843 0.9931911440183544 1.0 19.864817485265593 -9.835333066595268 13.749036924243201 1.0000004458345377 1.0480855623765515 0.026253059773024612 0.07055945202313127 0.0 0.0 0.07344163844305254 0.017812213683478132 1.46105623993722e-10 9.835333066595268 0.04808511654201375 DHHQPLGR ddPTM_KYSE-520_SHP099_60min_R1 3 DHHQPLGR 8 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 0 ;; 78.77 0.014266 210280000.0 186137.0 245392.0 183263.0 170595.0 212757.0 240585.0 174450.0 226466.0 169449.0 176196.0 False True 175811.60955508982 233602.99997909847 195076.42621116765 186808.29750874307 229499.765478262 239083.4197745253 192085.10846792976 225680.4423035616 138681.33306167714 174635.04051841365 1.0067373021656103 1.3376639607127827 1.1170520282302603 1.0697068409306199 1.3141679058050402 1.3690460921519136 1.099923061819178 1.2922975917869455 0.7941208857626398 1.0 17.41398353918938 -7.759754318468139 24.999999912012527 0.8970603904494056 1.2042448181941394 0.4772864767810985 0.1271161017555963 34.893649969086155 517758.4058130701 0.09402309960743681 0.03129557440558458 1.738784185371123e-08 7.759754318468139 0.30718442774473387 DHHYFK ddPTM_KYSE-520_SHP099_60min_R1 2 DHHYFK 6 0 Q92905 Q92905 COPS5 COP9 signalosome complex subunit 5 0 ; 148.4 0.011607 1195630000.0 2954300.0 4476000.0 2707500.0 2135560.0 2634600.0 3516900.0 2414100.0 2353200.0 1854870.0 1897000.0 False True 2790419.089748957 4260966.241387025 2882029.7821531654 2338522.9803204755 2841928.031176544 3494949.722572188 2658140.7873455384 2345037.298441011 1518072.3654675642 1880194.055843668 1.484112281429833 2.266237481255664 1.5328363437783343 1.2437668192026856 1.5115078267287325 1.858823939853356 1.4137587442551482 1.247231524401752 0.8074019597867439 1.0 20.842450140245827 -7.360532476176135 1.9355490352055238 0.9129133662732818 1.64507704915753 0.5429211335810041 0.26563664486804645 0.29044571144328574 1.9874502713277904 0.21973081645456627 0.08115507290945946 4.35980960491797e-08 7.360532476176135 0.7321636828842482 DHIKDEWEGLR ddPTM_KYSE-520_SHP099_60min_R1 6 DHIKDEWEGLR 11 1 H0YH15;O60306 H0YH15 AQR Intron-binding protein aquarius 0 ;;;;; 232.42 4.5683e-14 6203150000.0 5571780.0 6295640.0 4243300.0 3834380.0 6202310.0 6364970.0 4852300.0 5120790.0 4476240.0 4790720.0 False True 5262702.25633194 5993188.004451703 4516829.907520046 4198798.322351621 6690396.510683452 6325243.861264266 5342817.837884419 5103027.1746913735 3663467.6528277043 4748277.9479237655 1.1083391313756417 1.2621813782136084 0.9512564253941953 0.8842781253333306 1.4090153491559816 1.3321132272869673 1.125211686527454 1.0747111333115462 0.7715360585472032 1.0 22.17897295720092 -7.587283583518028 5.24278964556483 0.8883176687559222 1.1526908216256018 0.3062122127037137 0.1586747662450571 0.2658053553081482 14.096900431732626 0.12096212515525495 0.04370956250588344 2.5865234280123737e-08 7.587283583518028 0.26437315286967955 DHINDIIK ddPTM_KYSE-520_SHP099_60min_R1 3 DHINDIIK 8 0 P46940;A0A0J9YXZ5;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 0 ;; 135.79 0.00084724 1183990000.0 4085910.0 3815660.0 2689460.0 2618720.0 3965690.0 3653730.0 2815190.0 3719010.0 3112010.0 3201870.0 False True 3859256.4272403517 3632349.966177572 2862826.8948881496 2867602.3614531225 4277767.241310454 3630925.715787675 3099776.8788067168 3706109.6223334577 2546947.4313880247 3173503.922817164 1.2160868620620564 1.1445865688273937 0.9021028379088241 0.9036076309329126 1.3479634326441985 1.1441377745531354 0.9767679367022811 1.1678289085092708 0.8025663409695941 1.0 21.59764519528357 -7.756882498731532 24.999226723118905 0.90128315982485 1.0942804042122094 0.24342530116366634 0.14007331739317305 160.61378529606128 881171.4250758945 0.10578479058893428 0.036985573121854035 1.7503201853672745e-08 7.756882498731532 0.19299724438735943 DHLS(ph)DKESK ddPTM_KYSE-520_SHP099_60min_R1 1 DHLSDKESK 9 1 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 DHLS(1)DKESK 126.76 0.00044874 0.0 626920.0 561050.0 502220.0 533060.0 575380.0 545480.0 468540.0 538380.0 635050.0 525510.0 True False 592143.4978659636 534096.3158467808 534593.9047804109 583721.8621296675 620659.132535626 542075.4569844679 515904.59570973914 536512.4854388363 519740.928307739 520854.39024059294 1.1368695531056978 1.0254234693117805 1.0263788014409774 1.1207006661881738 1.1916173582580945 1.0407428009468684 0.9904967787089836 1.030062327382919 0.997862239516999 1.0 18.99052058429442 -6.513698765241316 24.707095939059048 1.0083261234870433 1.0953916336025806 0.47827307584883894 0.0471676110636161 397.7463891839171 1070505.1453066617 0.018909436461530746 0.015463316023858987 3.0640880054154553e-07 6.513698765241316 0.08706551011553731 DHLVTAYNHLFETK ddPTM_KYSE-520_SHP099_60min_R1 2 DHLVTAYNHLFETK 14 0 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 0 ; 219.52 6.7099e-14 952870000.0 640060.0 724900.0 480060.0 562930.0 859970.0 900280.0 681570.0 777400.0 575600.0 646420.0 False True 604554.5958720235 690074.7159029174 511005.43572315783 616430.6979489243 927644.7464400264 894661.0185780897 750469.7470821845 774703.3808465234 471085.54969519674 640693.2217071505 0.943594493260231 1.0770751000989025 0.7975820851695062 0.962130824962409 1.4478766358231216 1.396395323481389 1.1713402321980722 1.2091643154617713 0.7352747519943665 1.0 19.28927420184985 -5.563787567863422 24.982652356576892 1.1848666241488544 0.940961503213991 0.2160757004846734 0.1975074731802281 212.15261438411423 129558.6065357542 0.060379917419500974 0.07795021049252632 2.7303129699034367e-06 5.563787567863422 -0.24390512093486338 DHMVS(ph)PTAVAFLER ddPTM_KYSE-520_SHP099_60min_R1 1 DHMVSPTAVAFLER 14 0 K7EJ05;K7EPP9;K7ELY2;X6R2W0;K7EIY4;Q5U8S2;O60499 K7EJ05 STX10 Syntaxin-10 1 DHMVS(0.998)PT(0.002)AVAFLER 144.68 0.0019196999999999999 0.0 79226.0 96551.0 86505.0 76402.0 95765.0 90673.0 79718.0 91330.0 100110.0 94075.0 True False 74831.17584688458 91912.54503399445 92081.25071289379 83663.22310890105 103301.16067168528 90107.07617355848 87776.6734127053 91013.19754658215 81932.5475677312 93241.56868924246 0.8025516612261594 0.9857464468484287 0.9875557866232838 0.8972738692088683 1.1078874167804882 0.9663830997295779 0.9413899256162166 0.9761010976757901 0.8787126677458398 1.0 16.50868565601487 -4.2584948310107045 24.235041231020254 0.9718669443991468 0.8025515644679702 0.4228141854684878 0.059118960856836954 174.73293879334074 1438017.4249012189 0.014427480920386353 0.09724607504233779 5.514487657066829e-05 4.2584948310107045 -0.16931537993117662 DHNS(ph)EDEDEDKYADDIDMPGQNFDSK ddPTM_KYSE-520_SHP099_60min_R1 9 DHNSEDEDEDKYADDIDMPGQNFDSK 26 1 O95391 O95391 SLU7 Pre-mRNA-splicing factor SLU7 1 DHNS(0.898)EDEDEDKY(0.102)ADDIDMPGQNFDSK;DHNS(1)EDEDEDKYADDIDMPGQNFDSK;DHNS(1)EDEDEDKYADDIDMPGQNFDSK;DHNS(1)EDEDEDKYADDIDMPGQNFDSK;DHNS(1)EDEDEDKYADDIDMPGQNFDSK;DHNS(1)EDEDEDKYADDIDMPGQNFDSK;DHNS(1)EDEDEDKYADDIDMPGQNFDSK;DHNS(1)EDEDEDKYADDIDMPGQNFDSK;DHNS(1)EDEDEDKYADDIDMPGQNFDSK 398.24 4.7344999999999984e-101 13227820000.0 9855240.0 12293890.0 10467130.0 10956460.0 10628000.0 12375790.0 11234850.0 12811880.0 11460100.0 11654050.0 True False 9308550.19126613 11703273.070894899 11141857.947800137 11997758.664220188 11464363.134951934 12298548.104043785 12370578.27956965 12767438.578595277 9379234.725611398 11550804.183713704 0.8058789711274748 1.0131998503962323 0.9645958645468019 1.0386946634535348 0.9925164475661661 1.064735226087927 1.0709711707356102 1.105328977578634 0.8119984181565336 1.0 23.461489961867386 -3.621942604826247 1.534724489496609 1.0169993343210777 2.4309825657737253e-13 0.36814266629169434 0.07730763805056208 7.2890689571154565 3.8862272000557803 0.020855432643639125 18.206039855303324 0.0002388126870390299 3.621942604826247 -1.0169993343208346 DHNS(ph)EDEDEDKYADDIDMPGQNFDSKR ddPTM_KYSE-520_SHP099_60min_R1 1 DHNSEDEDEDKYADDIDMPGQNFDSKR 27 2 O95391 O95391 SLU7 Pre-mRNA-splicing factor SLU7 1 DHNS(1)EDEDEDKYADDIDMPGQNFDSKR 160.86 3.4161999999999995e-10 447080000.0 124200.0 172500.0 171420.0 140040.0 140970.0 171520.0 150780.0 156520.0 182540.0 115580.0 True False 117310.3784134382 164212.84107222105 182470.00748169757 153349.35949543872 152063.53699041874 170449.48005788657 166022.31387099146 155977.06865204277 149395.33745893167 114556.05111987934 1.0240434902096665 1.4334715579570514 1.5928447750939703 1.3386404122377036 1.3274160160364552 1.4879133698447453 1.4492670814678683 1.3615786082641557 1.3041243653082464 1.0 16.80569414163523 -8.261621624970426 1.904426696558592 1.0002710358920452 1.3899469384642034 0.39018279656794375 0.14038440768303562 1.0719873255124874 6.077116293899068 0.13484218517206736 0.037654648285913125 5.4749275313522225e-09 8.261621624970426 0.3896759025721581 DHNVGS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 2 DHNVGSPPK 9 0 A0A0C4DGH6;A0JNW5;F8W665;A0JNW5-2 A0A0C4DGH6 UHRF1BP1L UHRF1-binding protein 1-like 1 DHNVGS(1)PPK;DHNVGS(1)PPK 47.915 0.05606900000000001 2607400000.0 2932900.0 2370800.0 2114040.0 2373800.0 2586300.0 2397200.0 2296800.0 2543200.0 2895600.0 2318600.0 True False 2770206.1904088007 2256903.2093566516 2250314.4009835953 2599405.238291004 2789827.095965952 2382238.1856038095 2528982.9586078594 2534378.2327873437 2369832.0321358796 2298059.007843504 1.2054547689827855 0.9820910610448279 0.9792239421629506 1.1311307627084315 1.213992802814895 1.03663055538304 1.1004865192652533 1.1028342719387354 1.0312320197381386 1.0 21.131984412229972 -7.9171117578925765 3.990373997258279 1.0007762989416238 1.0898534455684883 0.1494519636527517 0.07583857626735901 0.41870323981423574 12.100742822282408 0.07524073834368845 0.019847933607131635 1.210286647921343e-08 7.9171117578925765 0.0890771466268645 DHPLPEVAHVK ddPTM_KYSE-520_SHP099_60min_R1 2 DHPLPEVAHVK 11 0 P13073;Q86WV2;H3BPG0;H3BN72;H3BNV9 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial 0 ; 178.67 5.7446e-06 1388500000.0 1507930.0 1682640.0 1204030.0 1657520.0 2278600.0 1867240.0 1536290.0 2074200.0 2372900.0 1327230.0 False True 1424282.1169160705 1601803.4487058674 1281643.7003161146 1815050.2024484414 2457912.8565394673 1855585.8625424902 1691593.1859455218 2067005.0843219187 1942041.1759411623 1315471.7747693157 1.0827158318663552 1.217664627571932 0.97428445436685 1.3797713012631783 1.8684649140195295 1.410585843142009 1.2859213085299102 1.57130325710287 1.4763077499566444 1.0 20.32714886318169 -5.408593090686204 5.804474553069877 1.469154388752107 1.1077544416975917 0.33481193885300253 0.21417374723595917 0.2445366912747228 10.835979160293332 0.05948332949135644 0.0886622875562208 3.903075114274516e-06 5.408593090686204 -0.3613999470545153 DHPYTWR ddPTM_KYSE-520_SHP099_60min_R1 4 DHPYTWR 7 0 Q9Y570;Q9Y570-4;Q9Y570-2;Q9Y570-3 Q9Y570 PPME1 Protein phosphatase methylesterase 1 0 ;;; 150.17 0.002281 1478620000.0 2990950.0 2517480.0 1785560.0 1725590.0 2801090.0 2502880.0 2046200.0 2020980.0 2063860.0 2034420.0 False True 2825036.041188996 2396536.481985484 1900660.054597011 1889589.554782447 3021519.846978028 2487258.5975238024 2253049.8649875536 2013969.6920802793 1689115.0496767326 2016396.6215548099 1.4010319254605066 1.1885243490130202 0.9426022808605202 0.9371120416406054 1.4984749600741665 1.2335165467624711 1.1173644316316422 0.9987964027272278 0.8376898828437255 1.0 20.94334801157014 -7.270518905198299 2.611524275453178 0.9208145415921644 1.1880398037707651 0.3159952723424285 0.1681399662120223 0.3974457560309134 5.282362143674681 0.1169462803091953 0.051206130541480016 5.3639052140866554e-08 7.270518905198299 0.26722526217860076 DHQFLEGK ddPTM_KYSE-520_SHP099_60min_R1 3 DHQFLEGK 8 0 Q96RS6-3;Q96RS6-2;Q96RS6 Q96RS6-3 NUDCD1 NudC domain-containing protein 1 0 ;; 113.74 0.0017623 2086780000.0 4930000.0 4831000.0 3236900.0 3310760.0 4811100.0 4947300.0 3556700.0 3983600.0 3734300.0 4174800.0 False True 4656523.072288656 4598911.5085211685 3445555.7532231174 3625413.6349837137 5189706.198585547 4916422.065592247 3916245.9460469293 3969781.821379228 3056245.25404234 4137814.5199452485 1.1253580966094805 1.1114349099877057 0.8326994205793229 0.8761662992645899 1.2542143137566777 1.1881687885945407 0.946452753541681 0.9593909543900377 0.7386134006999376 1.0 21.980437546288034 -7.15229059192682 2.7185187270755105 0.8801033653187064 1.0554036556263382 0.22135418137348284 0.13789962634586023 0.4721604374260233 6.704604626506611 0.08552691386609483 0.04269383711381389 7.042217076426935e-08 7.15229059192682 0.17530029030763183 DHQLLEPIRDFEAR ddPTM_KYSE-520_SHP099_60min_R1 4 DHQLLEPIRDFEAR 14 1 Q14134-2;Q14134 Q14134-2 TRIM29 Tripartite motif-containing protein 29 0 ;;; 196.67 5.8878e-11 2993420000.0 130363.0 116726.0 87366.0 221298.0 113862.0 101844.0 104859.0 101664.0 134584.0 99086.0 False True 123131.5045178023 111118.30775070199 92997.75215054252 242330.0953843299 122822.2916138405 101208.3538188863 115459.17104522018 101311.35131255598 110146.93818655012 98208.1751277415 1.2537805977724612 1.1314568019023672 0.9469451196866079 2.4675144922418717 1.2506320523121714 1.030549174620569 1.1756574327446767 1.0315979416253087 1.1215658782303979 1.0 16.583555503125524 -5.996589453543184 24.999528843599084 1.0870303492829798 1.4497273332565002 0.1790680308624374 0.3809536098855433 201.04563381501362 1473653.1077674755 0.12384519006567074 0.13975243918039204 1.0078839896878045e-06 5.996589453543184 0.36269698397352035 DHQPCIIFMDEIDAIGGR ddPTM_KYSE-520_SHP099_60min_R1 4 DHQPCIIFMDEIDAIGGR 18 0 P62333;A0A087X2I1;H0YJX2 P62333 PSMC6 26S protease regulatory subunit 10B 0 ;;; 203.26 7.4919e-13 598130000.0 568121.0 323745.0 236005.0 317772.0 485907.0 335243.0 235200.0 312178.0 281326.0 255339.0 False True 536606.1956088638 308191.8042488476 251218.2599213515 347972.95533836423 524145.1164673578 333150.62408492307 258976.31133079462 311095.1273808929 230244.2900513391 253076.895110736 2.1203286668032937 1.2177793002952546 0.9926558479841819 1.37496927637786 2.0710903547240593 1.316400787749313 1.0233107657555118 1.2292513990452212 0.9097799700387257 1.0 17.94921627571902 -6.561744984809852 5.87584710094558 1.0693984713756381 1.5140032330155169 0.34025737828169245 0.33410173475632704 0.26434822066174124 23.770348511474534 0.1350336461805221 0.10517407915982559 2.743184481048648e-07 6.561744984809852 0.4446047616398787 DHQYQFLEDAVR ddPTM_KYSE-520_SHP099_60min_R1 6 DHQYQFLEDAVR 12 0 Q13263-2;Q13263;M0R2I3;M0R3C0 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 0 ;;;;; 235.21 5.6481000000000004e-15 4404590000.0 3608040.0 3324830.0 2443230.0 2352800.0 3976170.0 3593960.0 2910950.0 2945780.0 2589760.0 2912440.0 False True 3407894.8287505754 3165100.1761284242 2600724.5151062193 2576409.404604885 4289071.957687404 3571528.762528232 3205217.234134253 2935561.7767302245 2119524.8665368874 2886638.0474440344 1.1805757329943345 1.0964658970427392 0.9009527597022507 0.8925294277494054 1.4858364253478717 1.2372624152482963 1.1103633990317228 1.0169483421482335 0.7342537691601532 1.0 21.46095879020101 -7.528807457575651 4.459239795735681 0.8646038139992466 1.1252348469847129 0.2740480490082772 0.1695011988285581 0.27703206880833275 14.011821106268236 0.12520835049477644 0.047913236263893856 2.9593241782726232e-08 7.528807457575651 0.2606310329854663 DHRPPCAQEAPR ddPTM_KYSE-520_SHP099_60min_R1 2 DHRPPCAQEAPR 12 1 E7EMC7;Q13501;Q13501-2;C9JRJ8;E9PFW8;E3W990 E7EMC7 SQSTM1 Sequestosome-1 0 ; 142.83 3.0999e-05 911630000.0 535060.0 490510.0 441090.0 438460.0 618570.0 494690.0 459790.0 489280.0 449120.0 401690.0 False True 505379.1551843337 466945.1633294793 469523.36716895347 480131.106572194 667247.9398181412 491602.45621406205 506270.06031796784 487582.80187881034 367571.129393861 398131.3391100907 1.269377980427175 1.1728420183480213 1.1793177804551618 1.2059615996203426 1.6759493018298535 1.2347745779392787 1.2716156970953116 1.2246782756882766 0.9232408838135215 1.0 18.602884912807028 -7.679078995049406 4.378675587291319 0.9607631084079494 1.2857887112087845 0.46321762935461985 0.13776937644756176 0.19608671791062038 6.673531975017114 0.11336301779958713 0.03760809004417321 2.09373158646399e-08 7.679078995049406 0.32502560280083503 DHS(ph)DS(ph)DDQMLVAK ddPTM_KYSE-520_SHP099_60min_R1 3 DHSDSDDQMLVAK 13 0 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 2 DHS(1)DS(1)DDQMLVAK;DHS(1)DS(1)DDQMLVAK;DHS(1)DS(1)DDQMLVAK 176.42 8.2788e-08 899790000.0 2268440.0 2649140.0 2403100.0 2073360.0 2471590.0 2322190.0 2124310.0 2795490.0 2905440.0 2510060.0 True False 2142605.1111769723 2521871.3379597934 2558007.6710959496 2270411.5110215857 2666090.0715765716 2307696.3508373564 2339055.9860676895 2785793.0976622687 2377885.3361820932 2487822.821197127 0.8612370193412576 1.013686069792656 1.028211353839519 0.9126098095398433 1.0716559269657568 0.9275967449028003 0.9402019975611239 1.1197715021850954 0.9558097610174134 1.0 21.246452311994343 -4.257062912265923 24.273542347113004 0.997146152732242 0.8612369363588914 0.2984334619461809 0.06226579472704944 371.537576882817 2060570.7269588828 0.014930563535746302 0.1130393061840121 5.5326995625661144e-05 4.257062912265923 -0.13590921637335063 DHS(ph)PTPSVFNS(ph)DEER ddPTM_KYSE-520_SHP099_60min_R1 1 DHSPTPSVFNSDEER 15 0 Q6UN15;Q6UN15-3;Q6UN15-5 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 DHS(1)PT(0.001)PSVFNS(0.999)DEER 278.82 4.8242999999999995e-21 0.0 246380.0 248960.0 223280.0 231050.0 243480.0 256680.0 256060.0 265150.0 265530.0 250910.0 True False 232712.81025364663 236999.58790342146 237672.9860606315 253008.92253228434 262640.49078830413 255077.96490938842 281945.04370477586 264230.2565364749 217316.44546658365 248687.1326050263 0.9357653844650231 0.9530030179721143 0.9557108305965799 1.017378421963319 1.056108082622188 1.0256982829687142 1.1337339441384406 1.0625007163363565 0.8738548037856599 1.0 17.92397233700906 -5.284393062866496 3.112273443686801 1.0341812126229764 0.9460612208996622 0.23496755973225258 0.0619045613263529 0.35380044585374176 6.995765904049517 0.018449418561758132 0.03144699321879807 5.195255815036434e-06 5.284393062866496 -0.0881199917233142 DHS(ph)PTPSVFNS(ph)DEERYR ddPTM_KYSE-520_SHP099_60min_R1 4 DHSPTPSVFNSDEERYR 17 1 Q6UN15;Q6UN15-3;Q6UN15-5 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 DHS(0.999)PT(0.033)PS(0.086)VFNS(0.858)DEERY(0.024)R;DHS(0.747)PT(0.265)PS(0.126)VFNS(0.861)DEERY(0.001)R;DHS(0.999)PT(0.002)PS(0.003)VFNS(0.997)DEERYR;DHS(0.984)PT(0.046)PS(0.044)VFNS(0.913)DEERY(0.012)R 86.625 0.0013050000000000002 1993860000.0 2899510.0 3226110.0 3209810.0 3086120.0 3244330.0 3131300.0 3006100.0 3117870.0 4238300.0 2912810.0 True False 2738668.400270117 3071122.8331101644 3416719.4884775872 3379423.916924192 3499640.313287405 3111756.395203245 3309985.924708769 3107054.83668633 3468731.5588484174 2887004.769531887 0.9486192850017972 1.0637747694501145 1.1834824536959774 1.1705640228201453 1.2122045485414468 1.0778494126657783 1.1465121082032248 1.0762208879863135 1.2014983818024154 1.0 21.461142060332193 -4.414285338487836 3.067118154053364 1.1386364215404041 0.9448309289190754 0.4448136216379559 0.06306476924494925 0.24530612878240785 3.8234146239936737 0.015477834118230036 0.09328336988817505 3.852251753414144e-05 4.414285338487836 -0.19380549262132873 DHS(ph)PTPSVFNSDEER ddPTM_KYSE-520_SHP099_60min_R1 9 DHSPTPSVFNSDEER 15 0 Q6UN15;Q6UN15-3;Q6UN15-5 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DHS(0.785)PT(0.215)PSVFNSDEER;DHS(0.823)PT(0.017)PS(0.16)VFNS(0.001)DEER;DHS(0.969)PT(0.031)PSVFNSDEER;DHS(0.917)PT(0.035)PS(0.047)VFNSDEER;DHS(0.993)PT(0.007)PSVFNSDEER;DHS(0.997)PT(0.003)PSVFNSDEER;DHS(0.998)PT(0.002)PSVFNSDEER;DHS(0.99)PT(0.01)PSVFNSDEER;DHS(0.965)PT(0.035)PSVFNSDEER 334.51 3.2189e-54 5133610000.0 3209510.0 3223830.0 2963450.0 3206680.0 3178590.0 3184220.0 3018280.0 3431430.0 3497440.0 3193540.0 True False 3031472.082300438 3068952.3677325174 3154478.7286876473 3511441.9030764997 3428726.9492968386 3164346.101853566 3323397.197974108 3419527.1702317786 2862393.059287643 3165247.720136523 0.9577361237842342 0.9695773092919716 0.9965977413456881 1.109373487811894 1.0832412665473625 0.9997151507993447 1.0499643288048128 1.0803347707914275 0.9043188124195799 1.0 21.59388698228813 -5.01026606490027 16.871015860535696 1.03846433494346 0.9685122192814646 0.19849524412763597 0.05478298010623767 9.900293218820908 16281.199777812291 0.014550926887906225 0.027499445819105947 9.766387125579468e-06 5.01026606490027 -0.06995211566199533 DHSGTLGPEEFK ddPTM_KYSE-520_SHP099_60min_R1 2 DHSGTLGPEEFK 12 0 P12814-3;P12814 P12814-3 ACTN1 Alpha-actinin-1 0 ; 196.24 9.3689e-08 948040000.0 1623950.0 1472270.0 887900.0 915600.0 1479150.0 1574050.0 1170250.0 1535170.0 1146370.0 1298310.0 False True 1533866.2562359332 1401539.9392776757 945135.4546902303 1002618.3487148226 1595550.6897877422 1564225.7700857976 1288550.2905393823 1529844.85358137 938218.1056360007 1286807.9834698967 1.1919931146990868 1.0891601212314541 0.7344805649570643 0.7791514830450829 1.239929119405458 1.2155860005374226 1.0013539759559056 1.1888680154564482 0.7291049773456346 1.0 20.29536536106214 -4.525948304501757 24.99436332608452 0.997131730672349 1.1662849669360877 0.11179703441310074 0.18233539694552708 191.59010277224928 1560070.811881752 0.04918813167861331 0.13173142967009996 2.9788709931221513e-05 4.525948304501757 0.1691532362637388 DHYDATYHK ddPTM_KYSE-520_SHP099_60min_R1 4 DHYDATYHK 9 0 P23229-7;P23229-4;P23229-2;P23229-9;P23229-6 P23229-7 0 ;;; 185.81 6.881e-06 2911380000.0 4177760.0 5646450.0 3843740.0 5494760.0 8045930.0 9129650.0 7154600.0 9590100.0 6753640.0 5768820.0 False True 3946011.324641918 5375186.066505755 4091513.6306014466 6016980.338340167 8679098.915920552 9072668.467878288 7877856.790167099 9556834.181446169 5527349.221409776 5717712.742874046 0.6901380852963994 0.9400937592055181 0.7155857271250078 1.05234043907489 1.517931960946668 1.5867653510899975 1.377798631102136 1.6714435668977596 0.9667063509439997 1.0 22.447006710307313 -5.557294770943357 3.9513520592574576 1.3980540733598161 0.8042232545886526 0.5583011526595876 0.22633473883234315 0.14619454592884795 4.978566451244005 0.06516608036995562 0.0890799091291823 2.771438393395406e-06 5.557294770943357 -0.5938308187711635 DHYEATAMHR ddPTM_KYSE-520_SHP099_60min_R1 7 DHYEATAMHR 10 0 B1AJY6;B1AJY5;B1AJY7;O75832-2;O75832 B1AJY6 PSMD10 26S proteasome non-ATPase regulatory subunit 10 0 ;;;;;; 189.72 3.7219999999999997e-06 3963357700.0 3724897.5 3855689.3000000003 2613896.8 2889865.5 4056886.3000000003 4012821.5 3144364.7 3657175.2 3134669.9 2935965.2 False True 3518270.0102759227 3670456.198520375 2782392.770110754 3164517.448250255 4376140.171284487 3987775.9925379464 3462227.7699181973 3644489.312822313 2565492.8647576203 2909954.832474363 1.2090462611353674 1.26134473207591 0.9561635593308705 1.0874799199406937 1.5038515795667562 1.3703910273916868 1.189787460369009 1.252421265151861 0.8816263524530917 1.0 21.472565329512385 -7.757139128462458 24.99937614757915 0.9408131158545447 1.2286825462891013 0.39822703037358 0.14161180570228468 109.55355941474035 636915.5450584099 0.11330101127618893 0.03944681044009126 1.7492862060538493e-08 7.757139128462458 0.2878694304345566 DHYPCVSS(ph)LEQLTELGR ddPTM_KYSE-520_SHP099_60min_R1 2 DHYPCVSSLEQLTELGR 17 0 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 DHYPCVS(0.251)S(0.749)LEQLTELGR;DHYPCVS(0.383)S(0.617)LEQLTELGR 201.15 6.7233e-13 159125000.0 69080.0 92041.0 81935.0 66563.0 66019.0 64586.0 65660.0 71035.0 83943.0 77595.0 True False 65247.99469243406 87619.21220364237 87216.66120063512 72889.1275071044 71214.31970327356 64182.89481703975 72297.55357984685 70788.59616469366 68701.06723082678 76907.56866799653 0.8483949736352235 1.1392794457186275 1.134045227422831 0.9477497308718806 0.9259728390413661 0.8345458831771406 0.9400577190516746 0.9204373170380934 0.8932939686001969 1.0 16.230837963984538 -5.450313707603066 6.229308098661649 0.9138900941465586 1.0502608694757405 0.2920463089033184 0.08410694070905746 0.2603119282842001 17.796902468751625 0.02358318006555166 0.03493149303332115 3.54557186423533e-06 5.450313707603066 0.13637077532918185 DIAAHIK ddPTM_KYSE-520_SHP099_60min_R1 1 DIAAHIK 7 0 F8VXL2;F8VRV5;P63167 F8VXL2 DYNLL1 Dynein light chain 1, cytoplasmic 0 84.244 0.016243 167040000.0 1052200.0 876350.0 621780.0 541990.0 902300.0 823230.0 661580.0 748390.0 766190.0 751180.0 False True 993832.3684913015 834248.830571833 661860.9336831754 593500.566644765 973305.876615272 818091.9162083358 728458.9627985851 745794.0097655384 627069.210078115 744525.129609197 1.3348540283831205 1.120511313042895 0.888970576494292 0.7971531692372759 1.3072841169594405 1.0988103472581967 0.9784209207027772 1.0017042811664496 0.8422404901326367 1.0 19.505961018678335 -4.395449732522606 3.316760059626825 0.9975025121536398 1.340122942053763 0.37711793624729395 0.13577991525367908 0.30596686456141997 5.49541617466959 0.03667396109759828 0.2143583084339805 4.0230021760065246e-05 4.395449732522606 0.3426204299001232 DIAAYR ddPTM_KYSE-520_SHP099_60min_R1 1 DIAAYR 6 0 P23497;P09429;P26583 P23497;P09429;P26583 SP100;HMGB1;HMGB2 Nuclear autoantigen Sp-100;High mobility group protein B1;High mobility group protein B2 0 130.01 0.055272 629250000.0 670360.0 839700.0 508000.0 451520.0 682690.0 816280.0 502320.0 633440.0 701290.0 710750.0 False True 633173.7944704712 799359.5515846034 540746.4928287383 494432.32504556247 736413.8190252469 811185.2937363085 553099.4077707689 631242.7444860067 573953.4140822521 704453.3079551333 0.8988158438895402 1.1347232564000036 0.7676115460347566 0.7018667092085724 1.045369239819297 1.1515103763100973 0.7851470090704661 0.896074640231813 0.814750115587231 1.0 19.42614456051188 DIAWTEDSKR ddPTM_KYSE-520_SHP099_60min_R1 8 DIAWTEDSKR 10 1 O75083;D6RD66 O75083 WDR1 WD repeat-containing protein 1 0 ;;;;;;; 203.02 2.1426e-06 14247020000.0 7587600.0 6800780.0 4803156.0 4284320.0 7505150.0 7119120.0 5880540.0 6217410.0 5591920.0 6043650.0 False True 7166700.702494404 6474060.320621107 5112775.1210813215 4691500.484672222 8095762.606537861 7074686.931376529 6475002.371739761 6195843.255864406 4576568.288831764 5990107.962888551 1.196422626586262 1.0807919257433858 0.8535363891197444 0.7832080012143697 1.3515219853623341 1.18106167287926 1.0809491935463187 1.034345840550868 0.7640210021565037 1.0 22.51415057502943 -7.606972027645803 7.587556308627505 0.8836879374948362 1.0695826567521824 0.17931955433715263 0.1627397778545905 0.44797775328227213 34.49479871357244 0.11931657844211939 0.04445730857721995 2.47188335074588e-08 7.606972027645803 0.18589471925734624 DICNDVLSLLEK ddPTM_KYSE-520_SHP099_60min_R1 3 DICNDVLSLLEK 12 0 P63104;E7EX29;B0AZS6;E7ESK7 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ;; 197.31 3.7819000000000003e-07 439112300.0 584679.0 793621.0 735949.0 376446.0 630839.0 625369.0 508293.0 448370.0 579141.0 545861.0 False True 552245.6903413092 755494.2559105923 783389.4501000346 412223.31465738284 680482.4403170814 621465.8401021477 559676.2169016312 446814.7091203447 473983.59335654235 541025.096213432 1.0207395076613057 1.3964125900964732 1.4479724796185627 0.7619301166294928 1.2577650188127947 1.1486820934032644 1.0344736701101964 0.825866881679881 0.8760843012161452 1.0 19.04533599148874 -6.945668635968492 2.711363906224702 0.8894600233290983 1.1818507331958352 0.3010482252122746 0.185265071538547 0.34323237539218465 5.09388284368498 0.09556403495928677 0.056566779895757056 1.1332647074843828e-07 6.945668635968492 0.2923907098667369 DIDEVSSLLR ddPTM_KYSE-520_SHP099_60min_R1 3 DIDEVSSLLR 10 0 P50990-2;P50990;H7C4C8;P50990-3 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ;; 188.66 2.6686999999999997e-05 439079000.0 289456.0 377279.0 414562.0 180649.0 336539.0 329160.0 258477.0 268239.0 336270.0 352946.0 False True 273399.2986637693 359153.95053267566 441285.3298426528 197817.8266458975 363022.7046550234 327105.5903442976 284606.3776524229 267308.54151645355 275211.84467686544 349819.17302783317 0.7815446371832125 1.0266845794186923 1.2614669631259523 0.5654859478790153 1.0377438763945044 0.9350705037492946 0.813581414617827 0.7641334784562689 0.7867260170298567 1.0 18.41624983766475 -5.253412333064022 24.998894577399124 0.8441147059526934 1.0235772752823677 0.19917060277632215 0.16537931473677792 1021.5260037369917 3181363.982211461 0.044836607596668625 0.07590949663539051 5.579402169103301e-06 5.253412333064022 0.1794625693296743 DIDFLKEEEHDCFLEEIMTK ddPTM_KYSE-520_SHP099_60min_R1 9 DIDFLKEEEHDCFLEEIMTK 20 1 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 0 ;;;;;;;; 198.77 2.9777e-13 1437283300.0 2679674.0 2291260.0 1601217.0 2250556.0 2120199.0 2105829.0 1892694.0 2128673.0 2023329.0 1507026.0 False True 2531027.1414223136 2181184.430348622 1704434.0098577836 2464448.165585665 2287046.59901787 2092685.7400933956 2084025.9804333637 2121289.130199015 1655943.4575733717 1493674.9220884852 1.6944966431406523 1.4602805457152939 1.1411010419018155 1.649922703488806 1.5311541789963758 1.4010315826735324 1.3952339626345458 1.4201812582037514 1.1086371158042871 1.0 20.510434768775564 -7.817455259157554 2.5477005298831696 0.9965994073021704 1.4610899454618287 0.569923408457305 0.14344810445575962 0.1999250554146518 2.4996326808871787 0.13764518367224085 0.03845257752603867 1.5224559676017826e-08 7.817455259157554 0.46449053815965824 DIDHETVVEEQIIGENS(ph)PPDYSEYMTGK ddPTM_KYSE-520_SHP099_60min_R1 4 DIDHETVVEEQIIGENSPPDYSEYMTGK 28 0 P25490;A0A494C032;H0YJU4;H0YJV7 P25490 YY1 Transcriptional repressor protein YY1 1 DIDHETVVEEQIIGENS(1)PPDYSEYMTGK;DIDHETVVEEQIIGENS(1)PPDYSEYMTGK;DIDHETVVEEQIIGENS(0.998)PPDY(0.002)S(0.001)EYMTGK;DIDHETVVEEQIIGENS(0.997)PPDY(0.002)S(0.001)EYMTGK 271.91 1.9683e-41 2413220000.0 1445040.0 1798990.0 1536400.0 2392230.0 1649530.0 1334000.0 1404490.0 1489670.0 1976370.0 1470350.0 True False 1364880.7505841777 1712563.820060959 1635438.8023269163 2619586.8199498244 1779338.6264581517 1325674.0111778267 1546469.5557014777 1484502.6824615905 1617511.0282333158 1457323.8429149908 0.9365665409371844 1.175142936408306 1.122220575939836 1.7975323965811427 1.2209630928010178 0.9096632966123483 1.0611708325640061 1.0186498283677536 1.109918729524052 1.0 20.47489007449111 -6.117312782672273 6.724950724654364 1.0252095637444123 1.2738609147665427 0.2298317573744153 0.2106418802476717 0.3936130587830245 20.368486607022945 0.07361450134624115 0.07378948074191874 7.632858604403282e-07 6.117312782672273 0.24865135102213043 DIDIEDLEELDPDFIMAK ddPTM_KYSE-520_SHP099_60min_R1 5 DIDIEDLEELDPDFIMAK 18 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;;;; 209.99 3.1091999999999994e-17 132079000.0 169673.4 208355.0 835327.0 113072.4 272849.0 183762.0 179091.7 132655.1 502872.0 242723.0 False True 160261.27826646273 198345.31305276896 889173.5149904557 123818.76689954332 294320.66400155186 182615.07319494698 197196.03680255628 132194.95042003322 411563.12117151334 240572.66305563657 0.6661657905387178 0.8244715360984227 3.696070466596693 0.5146834446061235 1.2234169097321135 0.7590848888458873 0.819694284038213 0.549501130930495 1.7107642902732147 1.0 17.876113188793045 DIDIHEVR ddPTM_KYSE-520_SHP099_60min_R1 3 DIDIHEVR 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;Q5RI18;A0A1W2PP35;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ;; 176.44 0.00012177 1302420000.0 4617540.0 3962530.0 2673580.0 2085640.0 3415980.0 3477980.0 2689040.0 2696410.0 2823530.0 3030150.0 False True 4361395.851362219 3772164.110921206 2845923.2446792456 2283858.59852947 3684798.1917325086 3456272.636728826 2960874.4057013607 2687056.7830568217 2310848.1273990264 3003305.228421028 1.4521986676842702 1.25600424333307 0.947597073300297 0.7604483809759812 1.2269143198840873 1.1508229679824928 0.9858719578955434 0.8946998652113451 0.7694349896676812 1.0 21.518119673973466 -4.589282160397186 3.217522598923067 0.9723580984678539 1.4277951423751167 0.5705609083888742 0.13887838731097854 0.18950529453883153 3.7823526428797885 0.03962941879088231 0.14560770600588685 2.574647869088806e-05 4.589282160397186 0.4554370439072628 DIDIS(ph)SPEFK ddPTM_KYSE-520_SHP099_60min_R1 1 DIDISSPEFK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DIDIS(0.5)S(0.5)PEFK 124.6 0.0010041 5149100000.0 4668700.0 4382300.0 3955300.0 4215500.0 4158200.0 3833600.0 4221800.0 4605900.0 5646500.0 4190700.0 True False 4409717.904177286 4171767.730033592 4210264.96670376 4616139.852563706 4485426.683078381 3809673.08039828 4648580.744797397 4589923.207925138 4621237.936681592 4153573.658315266 1.0616684009802573 1.0043803416563715 1.013648802947072 1.1113658339301156 1.0798957842239683 0.9172036886288238 1.1191761907222109 1.105054005419242 1.1125932309952138 1.0 21.985921708327975 DIDISS(ph)PEFK ddPTM_KYSE-520_SHP099_60min_R1 10 DIDISSPEFK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 DIDISS(1)PEFK;DIDIS(0.024)S(0.976)PEFK;DIDIS(0.003)S(0.997)PEFK;DIDIS(0.409)S(0.591)PEFK;DIDISS(1)PEFK;DIDIS(0.003)S(0.997)PEFK;DIDIS(0.009)S(0.991)PEFK;DIDIS(0.014)S(0.986)PEFK;DIDIS(0.037)S(0.963)PEFK;DIDIS(0.034)S(0.966)PEFK 313.05 1.6861999999999998e-37 135598300000.0 106105600.0 99740100.0 92734000.0 90121300.0 98955200.0 93109900.0 96480500.0 104912100.0 125947300.0 94925100.0 True False 100219710.85173029 94948435.88305764 98711782.01964602 98686401.25604308 106742411.26193032 92528766.57673636 106233690.4989402 104548184.41176824 103078445.1930609 94084137.46461031 1.0652136858822547 1.0091864414314522 1.0491862356369732 1.0489164689761217 1.1345420613765143 0.9834682983785763 1.129134978134863 1.111220097554638 1.0955985564711566 1.0 26.487448170053586 -5.544586958882333 24.886657680897063 1.0804169992512431 1.0398373235821152 0.09235163110720035 0.04900924119774754 452.5810213846728 518843.8142446839 0.014015423180597677 0.01809530685354087 2.853731053362439e-06 5.544586958882333 -0.0405796756691279 DIDKELR ddPTM_KYSE-520_SHP099_60min_R1 1 DIDKELR 7 1 P0C1S8 P0C1S8 WEE2 Wee1-like protein kinase 2 0 66.258 0.036448 1010100000.0 1948500.0 1753500.0 1197900.0 1147800.0 1865100.0 1874900.0 1430400.0 1765800.0 1604500.0 1723300.0 False True 1840412.8207615484 1669259.2279428393 1275118.550707767 1256886.5669013478 2011872.7590326355 1863198.053641159 1574998.7913587114 1759674.851940819 1313163.2461534785 1708032.9027071106 1.0775043137896378 0.9772992225718733 0.7465421472190582 0.7358678892597865 1.1778887607164712 1.0908443570894464 0.9221126764375852 1.0302347508363918 0.7688161299891871 1.0 20.703904335919095 -4.512053283504675 24.595063600863714 0.9365903436282446 1.0524531212519344 0.08370006033072053 0.14149291812109485 1121.6957610994773 2548430.2244718936 0.038128574007893344 0.11904275835591671 3.075719432177726e-05 4.512053283504675 0.1158627776236898 DIDTHTHR ddPTM_KYSE-520_SHP099_60min_R1 3 DIDTHTHR 8 0 Q86XP3;A0A0A0MSJ0;Q86XP3-2 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 0 ;; 114.28 0.001283 367240000.0 1020380.0 895473.0 760392.0 677672.0 1098740.0 946538.0 716162.0 857650.0 878341.0 727271.0 False True 963777.4873228997 852453.1329476243 809408.0849902162 742077.7431304845 1185204.5870245642 940630.3052415554 788558.6440275714 854675.0123270153 718856.4155747539 720827.944748276 1.3370423474071407 1.1826027822011171 1.1228866623267133 1.0294797094605277 1.6442267473945609 1.3049304096694498 1.0939623661551412 1.1856851812612241 0.9972649101801809 1.0 19.45929541645435 -7.469297449369895 1.4335453396768782 0.997619495221803 1.2560735358515724 0.27480325335370426 0.16021711983560727 0.6393885949053184 2.317042818099524 0.1516266377187859 0.05153118342611169 3.393927420366954e-08 7.469297449369895 0.2584540406297694 DIEDVFYK ddPTM_KYSE-520_SHP099_60min_R1 2 DIEDVFYK 8 0 J3KTL2;Q07955;Q07955-3;Q07955-2;J3QQV5;J3KSW7 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 0 ; 163.77 0.0014470000000000002 960510000.0 743090.0 897880.0 647000.0 509480.0 842230.0 907400.0 748660.0 789440.0 753970.0 841600.0 False True 701869.31638681 854744.4970546435 688706.655236602 557900.8260192521 908508.7093668187 901736.5800170614 824341.8590174858 786701.6168966806 617068.0540369835 834144.0787548913 0.8414245623303771 1.024696474894963 0.8256447210709922 0.6688302899086912 1.0891508223890167 1.081032165765732 0.9882487690231679 0.9431243797486076 0.7397619545031927 1.0 19.66993707123929 -5.783998152757582 24.99998280253903 0.9768179288402847 0.8522947573587422 0.22401411790407366 0.12070137630205516 418.67711628125693 463982.1751844233 0.04003651358131344 0.04542947274073753 1.644378717454519e-06 5.783998152757582 -0.12452317148154257 DIEGFMEENQTKLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 DIEGFMEENQTKLSPR 16 1 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5;E9PNZ4 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 DIEGFMEENQTKLS(1)PR 166.61 2.978e-06 0.0 204920.0 204110.0 164530.0 177440.0 210430.0 220650.0 200190.0 174560.0 231710.0 200060.0 True False 193552.67910210762 194304.249224644 175135.86705730762 194303.84425071854 226989.64381708056 219272.84150403825 220427.1588661214 173954.49210261012 189637.3049337632 198287.62404432462 0.976120824660451 0.9799111273894221 0.8832415431946387 0.9799090850333879 1.1447494260475881 1.1058322099568991 1.1116536391441545 0.8772836577220011 0.9563748915130086 1.0 17.597235110213045 -5.532224880161283 24.9770170606762 1.0366867985875208 0.9467401713679044 0.19968280692788698 0.07828125086363545 341.11551043426834 911607.1980370736 0.025703159937821417 0.03322554785402829 2.93612891396373e-06 5.532224880161283 -0.08994662721961633 DIEIS(ph)T(ph)EEEKDTGDLK ddPTM_KYSE-520_SHP099_60min_R1 10 DIEISTEEEKDTGDLK 16 1 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 2 DIEIS(0.999)T(0.999)EEEKDT(0.001)GDLK;DIEIS(0.952)T(0.996)EEEKDT(0.052)GDLK;DIEIS(1)T(1)EEEKDTGDLK;DIEIS(1)T(1)EEEKDTGDLK;DIEIS(1)T(1)EEEKDTGDLK;DIEIS(1)T(1)EEEKDTGDLK;DIEIS(1)T(1)EEEKDTGDLK;DIEIS(1)T(1)EEEKDTGDLK;DIEIS(1)T(1)EEEKDTGDLK;DIEIS(1)T(1)EEEKDTGDLK 208.44 8.5076e-18 14306420000.0 30409000.0 25252520.0 24605400.0 28359370.0 28359560.0 27259710.0 27912280.0 30128190.0 32311700.0 26280380.0 True False 28722152.15116135 24039351.034394737 26191503.45403195 31054635.998244513 30591296.028176267 27089572.038413998 30733925.660001352 30023682.340862427 26444709.79167178 26047556.279026236 1.1026812589820076 0.9229023550954557 1.0055263216811483 1.192228386631802 1.174440154787522 1.0400043577303566 1.1799158942502652 1.1526487175704005 1.015247246551314 1.0 24.63464469278042 -5.188349763741241 10.16356708433803 1.1170731325736079 1.0013286104151171 0.23945122080033254 0.07784997110238358 0.7070231167733319 95.51426767259325 0.02044767097574184 0.035459511373008075 6.481122591147013e-06 5.188349763741241 -0.11574452215849074 DIEIS(ph)T(ph)EEEKDTGDLKDS(ph)SLLK ddPTM_KYSE-520_SHP099_60min_R1 1 DIEISTEEEKDTGDLKDSSLLK 22 2 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 3 DIEIS(0.987)T(0.988)EEEKDT(0.047)GDLKDS(0.549)S(0.429)LLK 43.622 0.057192999999999994 0.0 224240.0 234750.0 202570.0 228590.0 199710.0 199210.0 193170.0 209680.0 244070.0 198560.0 True False 211800.96018864217 223472.25763306624 215627.98632345954 250315.1248719103 215426.0408055372 197966.65649680258 212697.50875752358 208952.66901968 199753.0405040075 196800.9128773426 1.0762193990464284 1.1355244971467522 1.0956655798535397 1.2719205475836424 1.0946394386890004 1.0059234665247032 1.0807750108867058 1.0617464419482192 1.015000578927725 1.0 17.586377387189984 -6.000841981509602 24.9999911213642 1.04074559426185 1.145983756826309 0.4894321098337169 0.05380282109237522 28.703811474831507 852311.7353215535 0.01684399322219786 0.018876925837939283 9.980631440583878e-07 6.000841981509602 0.10523816256445895 DIEIS(ph)T(ph)EEEKDTGDLKDSSLLK ddPTM_KYSE-520_SHP099_60min_R1 7 DIEISTEEEKDTGDLKDSSLLK 22 2 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 2 DIEIS(1)T(1)EEEKDTGDLKDSSLLK;DIEIS(1)T(1)EEEKDTGDLKDSSLLK;DIEIS(0.996)T(0.997)EEEKDT(0.007)GDLKDSSLLK;DIEIS(1)T(1)EEEKDTGDLKDSSLLK;DIEIS(1)T(1)EEEKDTGDLKDSSLLK;DIEIS(0.995)T(0.883)EEEKDT(0.12)GDLKDS(0.001)SLLK;DIEIS(0.813)T(0.857)EEEKDT(0.324)GDLKDS(0.005)S(0.001)LLK 178.39 1.7699999999999999e-09 25048780000.0 10708350.0 11397140.0 10424550.0 9238200.0 9364800.0 9637280.0 7983950.0 8727440.0 12635860.0 8331480.0 True False 10114336.478933495 10849604.28694409 11096533.172869748 10116195.750433892 10101756.48157676 9577130.160752492 8791045.581843112 8697166.54763981 10341506.348109014 8257669.568993362 1.2248415118124503 1.3138821063612374 1.3437850812699028 1.2250666687389735 1.2233180798984427 1.1597860729028877 1.0645915906895231 1.0532228826758472 1.2523516788489855 1.0 22.977303259488504 -6.129727904068695 1.3994122697421365 1.0970014778346446 1.2905882121805468 0.5931988437228488 0.06920539844752373 0.2911192694939 1.1575372883629425 0.03002622838275005 0.030233485316360723 7.417748355092181e-07 6.129727904068695 0.19358673434590212 DIEIS(ph)TEEEKDT(ph)GDLKDSSLLK ddPTM_KYSE-520_SHP099_60min_R1 2 DIEISTEEEKDTGDLKDSSLLK 22 2 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 2 DIEIS(0.822)T(0.379)EEEKDT(0.798)GDLKDSSLLK;DIEIS(0.79)T(0.274)EEEKDT(0.934)GDLKDS(0.001)S(0.001)LLK 138.12 3.4615e-06 3736700000.0 5401440.0 5255840.0 5493700.0 4792680.0 5212610.0 4534470.0 4354660.0 4206380.0 6360600.0 4078030.0 True False 5101811.3556963075 5003341.557223329 5847832.6922307825 5248174.866228214 5622812.751306141 4506168.690753759 4794871.530186052 4191789.049556471 5205675.377677671 4041901.8268593317 1.2622303990150485 1.2378681550291544 1.4468022586225724 1.298441944174134 1.3911304608987052 1.1148634686793408 1.1862909431206543 1.037083340743485 1.287927218589231 1.0 21.946602850066256 -6.270040298840382 24.84127010710555 1.1313668140783228 1.3273628899134826 0.5441046780079007 0.09239417624595897 465.4392134055303 1344282.9653648548 0.03099191319092269 0.027769424794391644 5.369819666913393e-07 6.270040298840382 0.19599607583515977 DIEIS(ph)TEEEKDTGDLK ddPTM_KYSE-520_SHP099_60min_R1 1 DIEISTEEEKDTGDLK 16 1 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEIS(0.5)T(0.5)EEEKDTGDLK 114.02 0.00012984 339670000.0 194400.0 144570.0 132800.0 151030.0 186000.0 174610.0 130630.0 168420.0 207840.0 161850.0 True False 183616.24447320768 137624.64019600602 141360.50048751285 165383.8457911749 200637.14180476658 173520.19422170936 143835.35522594253 167835.7903295235 170101.4952200305 160416.13491739478 1.1446245389702205 0.8579226788307479 0.8812112357669352 1.0309676509556736 1.2507291857398468 1.0816879131956547 0.896638952808641 1.0462525506922942 1.0603764721524 1.0 17.291459732156163 -5.50489785449406 24.488790772154815 1.0596968704122838 0.9517813863404522 0.1296449194068312 0.10876021723371763 1100.037810678618 1498178.711308584 0.032324613363627595 0.046875593983201014 3.126814703459205e-06 5.50489785449406 -0.1079154840718316 DIEIS(ph)TEEEKDTGDLKDSSLLK ddPTM_KYSE-520_SHP099_60min_R1 4 DIEISTEEEKDTGDLKDSSLLK 22 2 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEIS(0.5)T(0.5)EEEKDTGDLKDSSLLK;DIEIS(0.644)T(0.356)EEEKDTGDLKDSSLLK;DIEIS(0.954)T(0.04)EEEKDT(0.006)GDLKDSSLLK;DIEIS(0.93)T(0.07)EEEKDTGDLKDSSLLK 236.03 4.928899999999999e-27 2909900000.0 1612470.0 1560130.0 1489790.0 1292080.0 1502830.0 1534020.0 1109779.0 1304143.0 2193270.0 1234490.0 True False 1523023.074720746 1485179.0129971278 1585824.2471482793 1414878.894721983 1621094.1710669738 1524445.612164174 1221966.2917192942 1299619.2323222647 1795027.455837358 1223553.379018688 1.2447540915151882 1.213824454629244 1.296080967403432 1.1563687526708 1.3249067828713126 1.245916719536018 0.9987028867505013 1.0621679892417795 1.4670610098572099 1.0 20.222645611457214 -6.598533889155165 24.999944458224714 1.1350406149485994 1.2472535184292108 0.157030535755046 0.13044916740179976 75.00711437028863 24782.824349505154 0.04884228962597936 0.0378330785495083 2.520380499962048e-07 6.598533889155165 0.11221290348061141 DIEIST(ph)EEEKDTGDLKDSSLLK ddPTM_KYSE-520_SHP099_60min_R1 3 DIEISTEEEKDTGDLKDSSLLK 22 2 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEIS(0.455)T(0.52)EEEKDT(0.025)GDLKDSSLLK;DIEIS(0.464)T(0.536)EEEKDTGDLKDSSLLK;DIEIS(0.113)T(0.887)EEEKDTGDLKDSSLLK 217.84 1.3218e-19 1338260000.0 893863.0 936240.0 891054.0 821822.0 824440.0 847989.0 705845.0 788542.0 1190300.0 777910.0 True False 844278.6375182859 891261.6250751086 948492.7665768074 899927.715790205 889318.7375780729 842696.3861054516 777198.7009833546 785806.7318490861 974171.5250211817 771018.3226048228 1.095017605633494 1.1559538845510877 1.2301818760576293 1.1671936832186716 1.1534339865926684 1.0929654476413353 1.0080158644708364 1.019180360324385 1.2634868672511208 1.0 19.5564056194241 -6.286050831167161 3.5874508017098425 1.0717928018891372 1.1655139197535231 0.2332453350536018 0.07623903494895706 0.35354894737213316 9.798024074965022 0.0277165425554461 0.025342327121404294 5.175462531939394e-07 6.286050831167161 0.09372111786438597 DIEISTEEEKDTGDLKDSS(ph)LLK ddPTM_KYSE-520_SHP099_60min_R1 1 DIEISTEEEKDTGDLKDSSLLK 22 2 Q4G0J3;Q4G0J3-3 Q4G0J3 LARP7 La-related protein 7 1 DIEISTEEEKDTGDLKDS(0.198)S(0.802)LLK 101.45 0.00078808 1796900000.0 1363800.0 1230100.0 1265100.0 1160300.0 1196300.0 1185200.0 992840.0 1211600.0 1672600.0 1085900.0 True False 1288147.2953321014 1171004.1495822575 1346650.3702315686 1270574.5631430836 1290442.0039840979 1177802.7271723812 1093205.9563846358 1207397.2423895663 1368898.0028147784 1076279.7708174153 1.1968517203977331 1.088010925535561 1.2512084745482224 1.1805244301656852 1.1989837948956619 1.0943276637800792 1.0157265666661794 1.1218247105699752 1.2718793383760476 1.0 20.037621713674863 -6.26551868059143 23.961251951490574 1.103051627172105 1.181471216265188 0.21625754536740727 0.07830638307695267 349.9200958656052 2055377.029858229 0.027416908576861975 0.025097402765286134 5.426019115376064e-07 6.26551868059143 0.078419589093083 DIEREDIEFICK ddPTM_KYSE-520_SHP099_60min_R1 5 DIEREDIEFICK 12 1 P50991-2;P50991 P50991-2 CCT4 T-complex protein 1 subunit delta 0 ;;;; 220.31 1.8609000000000002e-11 2745549000.0 4699680.0 4293650.0 2883600.0 2695920.0 4091360.0 3858760.0 3026450.0 3142820.0 3174130.0 3180120.0 False True 4438979.381820183 4087376.6090999604 3069481.469923132 2952139.4262420936 4413326.755345968 3834676.0475056535 3332393.101305629 3131918.2909597037 2597788.0053057894 3151946.610895919 1.4083294959613653 1.2967785034715902 0.9738367583106533 0.9366083219927916 1.4001908344797471 1.216605647522587 1.0572492217304466 0.9936457299539974 0.8241852816686467 1.0 21.587811667301196 -7.1001080690879075 2.254373252558692 0.9220552894136131 1.1943849961112576 0.37951025629553026 0.1531836578052609 0.38455105212460977 3.7845685367064625 0.09960041007109292 0.04916353711060674 7.941306000504369e-08 7.1001080690879075 0.27232970669764445 DIFYYEDDS(ph)EGEDIEK ddPTM_KYSE-520_SHP099_60min_R1 2 DIFYYEDDSEGEDIEK 16 0 Q15361;A0A087WY09 Q15361 TTF1 Transcription termination factor 1 1 DIFYYEDDS(1)EGEDIEK;DIFYYEDDS(1)EGEDIEK 184.22 4.0033e-09 0.0 232760.0 218040.0 213530.0 219610.0 239910.0 233120.0 236290.0 254830.0 256060.0 243530.0 True False 219848.3388044436 207565.03111528786 227294.48546007986 240481.66837184574 258789.552098825 231665.01160852658 260176.4991681697 253946.05420776925 209565.95874731062 241372.5136634729 0.9108259075056127 0.859936485579629 0.9416750980063084 0.9963092512974812 1.0721583339005838 0.9597820733288599 1.0779044192700158 1.0520918490405526 0.8682262763335692 1.0 17.88090187273712 -5.08863879034438 2.7998051017935452 1.0104113586664325 0.8861306412240209 0.39334084954507464 0.05887640839617537 0.25363699908686205 3.8580279085723386 0.016425154253276023 0.03408767012542675 8.153821684480203e-06 5.08863879034438 -0.12428071744241165 DIGAIAR ddPTM_KYSE-520_SHP099_60min_R1 1 DIGAIAR 7 0 E7EWB4;Q9BPU6 E7EWB4 DPYSL5 Dihydropyrimidinase-related protein 5 0 110.54 0.0013673000000000001 395210000.0 286170.0 336170.0 856750.0 346290.0 466350.0 286800.0 451620.0 250080.0 1255600.0 407900.0 False True 270295.5796342484 320019.8885985429 911977.4758484687 379201.29748411546 503049.0918314666 285009.97481694166 497274.1569864522 249212.53084911086 1027614.6911002229 404286.32334139827 0.6685746314648349 0.791567436547447 2.255771276928288 0.9379523263365508 1.2442891653464825 0.7049706071215917 1.2300048957296303 0.6164258261060792 2.5417992936467875 1.0 18.625017873739512 -7.7449567659178875 24.999968483788535 1.7709007417323899 1.0837742117289741 0.19973141873060152 0.5701093369105324 337.3600208757201 511694.71582551685 0.37462735023429394 0.14070344420109468 1.7990500019174935e-08 7.7449567659178875 -0.6871265300034157 DIIDYES(ph)DVEPETKR ddPTM_KYSE-520_SHP099_60min_R1 2 DIIDYESDVEPETKR 15 1 F5GYN7;Q5FWF4-2;Q5FWF4-3;Q5FWF4 F5GYN7 ZRANB3 DNA annealing helicase and endonuclease ZRANB3;DNA annealing helicase ZRANB3;Endonuclease ZRANB3 1 DIIDYES(1)DVEPETKR;DIIDYES(1)DVEPETKR 171.98 1.7857e-08 621730000.0 468300.0 475820.0 425250.0 435140.0 457580.0 415380.0 442630.0 467980.0 579470.0 513970.0 True False 442322.46546709444 452960.8929796193 452662.2954240574 476495.5747703879 493588.9427259408 412787.4593426124 487375.3600525072 466356.6866073526 474252.8552499579 509416.6256626095 0.8682921663417557 0.8891757162233231 0.8885895603333902 0.9353749971363803 0.9689297872520722 0.8103140701497337 0.9567323395041676 0.9154720578676678 0.930972471958658 1.0 18.958486519580106 -13.999999999953614 0.12550116986337015 1.3110285831888377 0.8655357100272364 0.35005922753239527 0.04191521959207209 176.26856197414588 1.4110760418754462 13.777717024537102 0.3555535583712427 1.0000000001068077e-14 13.999999999953614 -0.44549287316160135 DIIHDPGR ddPTM_KYSE-520_SHP099_60min_R1 7 DIIHDPGR 8 0 E9PKU4;P62917;G3V1A1;E9PKZ0 E9PKU4 RPL8 60S ribosomal protein L8 0 ;;;;;; 122.13 0.0015612 4597810000.0 4985300.0 4594380.0 3269558.0 2798497.0 4338240.0 4597740.0 3308474.0 3904690.0 3872820.0 3866630.0 False True 4708755.471050838 4373659.08849502 3480318.940157764 3064465.3134812005 4679634.806790917 4569043.799214947 3642926.8395146225 3891145.541751496 3169613.513847375 3832374.6663926244 1.2286782689447069 1.1412399541331644 0.9081364018705804 0.7996257099689449 1.2210796736102554 1.1922226287743787 0.9505664650851251 1.0153353678788906 0.8270625368763592 1.0 21.86980718022179 -4.580544073637082 5.479855827952621 0.9976114315549788 1.2093195728068553 0.2767218998112948 0.12930889059144562 0.24604496567582507 14.887002264725307 0.035528434583240044 0.10066846005334175 2.6269749188578805e-05 4.580544073637082 0.21170814125187654 DIIHFFR ddPTM_KYSE-520_SHP099_60min_R1 2 DIIHFFR 7 0 F8W7U8;P49959-2;P49959;P49959-3 F8W7U8 MRE11A Double-strand break repair protein MRE11A 0 ; 138.37 0.0029269 648720000.0 896560.0 742090.0 621080.0 562410.0 1046450.0 844430.0 661640.0 603880.0 689400.0 612110.0 False True 846826.0295519503 706438.8825002002 661115.8105631358 615861.2773052672 1128799.6615139677 839159.5991445961 728525.0281841292 601785.2812266517 564222.3383597431 606687.1816143738 1.3958198808462958 1.1644203205684855 1.0897144864737858 1.0151216244036694 1.8605958650886119 1.3831833349628737 1.2008248241631692 0.9919202176405338 0.9300053725519085 1.0 19.210593304158163 -7.164346623207861 3.0989613229667583 0.9645423068974835 1.310469532380773 0.3308681110097059 0.21826973976469777 0.3493199051538983 6.3970667602003415 0.13072676349639725 0.06708314528606583 6.849413363978704e-08 7.164346623207861 0.34592722548328936 DIIIFVGT(ph)PVQK ddPTM_KYSE-520_SHP099_60min_R1 7 DIIIFVGTPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DIIIFVGT(1)PVQK;DIIIFVGT(1)PVQK;DIIIFVGT(1)PVQK;DIIIFVGT(1)PVQK;DIIIFVGT(1)PVQK;DIIIFVGT(1)PVQK;DIIIFVGT(1)PVQK 194.48 3.011e-07 637200000.0 1922350.0 1871480.0 1778560.0 1581100.0 1399780.0 1476210.0 1481891.0 1933760.0 2034940.0 1804980.0 True False 1815713.413390281 1781571.2916512517 1893208.8233966166 1731367.2686249504 1509934.7223412683 1466996.4258177031 1631695.004142442 1927052.2379029782 1665446.1926628633 1788989.2814531906 1.0149381174130805 0.9958535303264012 1.0582561019363788 0.9677907445138889 0.8440155220576575 0.8200140945652097 0.9120764562753675 1.0771737191950304 0.9309425215281482 1.0 20.7707133129797 -5.519270921046009 24.895674326903222 0.9260789751209977 1.0190869788598604 0.25810765345288866 0.06970585328683343 209.8071623974633 1447773.6204753607 0.022591824243236427 0.02985053826764998 3.0250257715531534e-06 5.519270921046009 0.09300800373886275 DIINMLFYHDR ddPTM_KYSE-520_SHP099_60min_R1 4 DIINMLFYHDR 11 0 E9PK47;P06737-2;P06737 E9PK47 PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form 0 ;;; 164.81 3.0692e-05 414028000.0 423283.0 397117.0 309093.0 267840.0 519472.0 489075.0 316150.0 266743.0 241908.0 207072.0 False True 399802.6481962587 378038.9032352308 329017.6293462863 293295.4330709674 560351.4910086322 486022.5015118406 348109.5273266613 265817.7307912843 197983.6052044223 205237.50317957834 1.9479999610326584 1.8419582063637512 1.603106762892175 1.4290537963441323 2.7302587603511084 2.3680979059981135 1.6961302000544853 1.2951713340553532 0.964656079601548 1.0 17.646934854053875 -7.293332470561415 2.462747066640342 1.0152815119857261 1.971317756211911 0.5754555665271028 0.34877902119148246 0.2508050535439922 2.9212165743856993 0.26218592488970094 0.11007712089294303 5.089411062161366e-08 7.293332470561415 0.9560362442261849 DIISDT(ph)SGDFRK ddPTM_KYSE-520_SHP099_60min_R1 2 DIISDTSGDFRK 12 1 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 DIISDT(0.708)S(0.292)GDFRK;DIISDT(0.682)S(0.318)GDFRK 125.61 0.00016992 1140520000.0 786150.0 699980.0 607140.0 596610.0 655450.0 644210.0 622510.0 614260.0 737820.0 677890.0 True False 742540.6923488287 666351.9101085992 646277.2158583471 653311.6350226621 707030.185999645 640189.2464324345 685439.3859121305 612129.2754293614 603850.486928614 671884.4219904392 1.1051613462760042 0.9917656791841519 0.9618874834808174 0.972357169834723 1.0523092407844306 0.9528264467509031 1.020174547106681 0.9110633546405871 0.8987416096651318 1.0 19.357853555413914 -7.2608348230109385 24.990306478252567 0.928676859302316 1.0038689146893327 0.29680408061332586 0.04967201890316984 64.62141437656685 2671354.9494856196 0.02455663499510396 0.013079581409513241 5.484855329921577e-08 7.2608348230109385 0.07519205538701668 DIISDTS(ph)GDFRK ddPTM_KYSE-520_SHP099_60min_R1 1 DIISDTSGDFRK 12 1 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 DIISDT(0.302)S(0.697)GDFRK 115.8 9.9118e-05 252520000.0 357370.0 303370.0 284090.0 307700.0 301830.0 313210.0 291160.0 316060.0 379480.0 332410.0 True False 337545.97370056715 288795.6498323467 302402.89596007124 336943.7154866218 325582.30382221815 311255.1402106495 320593.29424776474 314963.6616289588 310575.9979123228 329465.1060110667 1.0245272338164668 0.8765591395364525 0.9178601631637238 1.0226992459568809 0.9882148302870103 0.9447286967020856 0.9730720747009731 0.9559848854475631 0.9426673485169946 1.0 18.329766150442367 -5.213892860349615 24.999245923514675 0.9726709947326798 0.9333398685765516 0.12696096152209257 0.041508677147445106 767.2524326353563 403408.90339249827 0.011112339966516949 0.01924712342978865 6.110927617725995e-06 5.213892860349615 -0.039331126156128215 DIISDTSGDFR ddPTM_KYSE-520_SHP099_60min_R1 7 DIISDTSGDFR 11 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;;;;; 261.6 1.7708e-19 3242800000.0 3102220.0 3955300.0 3727840.0 2231265.0 4016490.0 4406030.0 3374377.0 3773970.0 4085120.0 4440010.0 False True 2930133.6724777464 3765281.450973664 3968142.5311548943 2443323.754745717 4332564.912297991 4378530.332436154 3715491.9579059226 3760878.978921221 3343365.1854948574 4400674.965675509 0.6658373307122826 0.8556145319393497 0.901712251439997 0.5552156825494301 0.9845228166340927 0.9949679007397548 0.8443004736514528 0.8546141235731828 0.7597391790060657 1.0 22.069293387381315 -5.814446938314407 24.999998892791563 0.9004157173485914 0.7637417823401977 0.31729508822302255 0.11467918003351601 140.95534640517727 66477.94035231559 0.03625451022375475 0.0411087908467681 1.5330385001028337e-06 5.814446938314407 -0.13667393500839364 DIISDTSGDFRK ddPTM_KYSE-520_SHP099_60min_R1 10 DIISDTSGDFRK 12 1 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;;;;;;;; 243.85 4.8908000000000005e-15 26993890000.0 11551700.0 11696860.0 7026980.0 6041940.0 10825090.0 11150780.0 8207790.0 9847640.0 9712160.0 10181150.0 False True 10910904.173256971 11134925.288255205 7479950.374365522 6616164.1610245025 11676962.996663213 11081183.845848171 9037513.513510989 9813480.835296448 7948676.567629771 10090952.93181483 1.081256076307421 1.1034562705320854 0.7412531229615271 0.6556530593027554 1.1571714857422433 1.098130565143291 0.8956055562421117 0.9725028846736995 0.7877032646311455 1.0 23.266559084947964 -11.408588928770879 2.0818667977518204 1.3959733503285208 0.9441756044264799 0.01065239223250336 0.1628799077576118 23480938.59633468 2031159.8973936476 43853358.82938021 0.04318645095327682 3.903112518263392e-12 11.408588928770879 -0.4517977459020409 DIKEES(ph)DEEEEDDEESGR ddPTM_KYSE-520_SHP099_60min_R1 4 DIKEESDEEEEDDEESGR 18 1 Q96EV2;A8MTF7;Q96EV2-2;H7BXM6;H7C0H2 Q96EV2 RBM33 RNA-binding protein 33 1 DIKEES(1)DEEEEDDEESGR;DIKEES(1)DEEEEDDEESGR;DIKEES(1)DEEEEDDEESGR;DIKEES(1)DEEEEDDEESGR 297.99 2.2332e-38 3057930000.0 3365370.0 3045150.0 3140830.0 2965680.0 3371010.0 2991970.0 3175220.0 3406500.0 3948130.0 3179540.0 True False 3178686.217401228 2898856.423136665 3343292.9273056793 3247537.3355357954 3636289.308576806 2973296.0054150787 3496202.2247609063 3394683.6465830784 3231249.116257986 3151371.7492446923 1.0086674852508537 0.9198712985325996 1.0609008372645932 1.0305154687999445 1.1538750734337633 0.9434926254345289 1.1094223414292084 1.0772082498349178 1.0253468563435713 1.0 21.587548520175083 -4.77700311999652 24.91696702941352 1.054171376440375 0.9642693938969586 0.25476438404606416 0.05838377072846391 243.98475082527298 390611.5010692334 0.01442848707816032 0.0302057428604762 1.671078609142808e-05 4.77700311999652 -0.08990198254341641 DILETHLR ddPTM_KYSE-520_SHP099_60min_R1 4 DILETHLR 8 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 ;;; 152.47 0.00062511 1222940000.0 695234.0 669630.0 416489.0 407851.0 741931.0 702806.0 516910.0 499999.0 481358.0 509327.0 False True 656667.9841053816 637459.9696648784 443336.547345962 446613.03641512536 800316.7486900644 698419.5270613506 569164.307355446 498264.6201696441 393955.52124770754 504814.7590304099 1.3008097967789887 1.262760167490424 0.8782162950177445 0.8847067729812977 1.5853671755303287 1.3835164574086434 1.1274716065129144 0.9870246684678028 0.7803962031624669 1.0 18.945394564766612 -7.293063587345715 2.997929137486581 0.8929729512069959 1.2061689615857083 0.288801271550582 0.20663413892025573 0.38639800564047216 6.93799209732549 0.1421341736381733 0.06314799993920749 5.0925630269708284e-08 7.293063587345715 0.31319601037871236 DILIQYDR ddPTM_KYSE-520_SHP099_60min_R1 3 DILIQYDR 8 0 M0R210;P62249 M0R210 RPS16 40S ribosomal protein S16 0 ;; 124.08 0.0067442 768090000.0 946550.0 1391950.0 1020890.0 763080.0 1245100.0 1287220.0 891840.0 1240830.0 1276720.0 1289980.0 False True 894042.9845993548 1325078.6326404554 1086698.2028817537 835602.8937716323 1343082.2863500786 1279185.9825099863 981995.8907196264 1236525.8503418982 1044899.8314920985 1278551.7807892545 0.6992622418839063 1.0363902757403223 0.8499446164088333 0.6535542058811351 1.0504715620676617 1.000496031314696 0.7680532814349036 0.967130052080164 0.8172526503753162 1.0 20.2860791596066 -5.7819073765233675 24.999607239779657 0.9272944400270416 0.8288419009497444 0.1844239911300719 0.12486368831036782 527.8343874041445 644693.7278926795 0.03909365539841858 0.044378277910548 1.652314155371655e-06 5.7819073765233675 -0.09845253907729723 DILKPEIMEEIVMETR ddPTM_KYSE-520_SHP099_60min_R1 1 DILKPEIMEEIVMETR 16 1 A3KFL2;Q13868-3;Q13868-2;Q13868 A3KFL2 EXOSC2 Exosome complex component RRP4 0 93.684 0.001898 20559000.0 91044.0 51929.0 44769.0 47346.0 71842.0 54477.0 44875.0 50277.0 58443.0 39886.0 False True 85993.60782828549 49434.2528929819 47654.88137293263 51845.74960490603 77495.55667493572 54136.9888357829 49411.402937795116 50102.600821740016 47831.22442813826 39532.64107083843 2.1752558265508695 1.2504667422649756 1.2054565564577377 1.311466884087096 1.960292926952987 1.369425046476783 1.2498887400225793 1.2673729724245164 1.209917251479091 1.0 15.270756720553718 -1.0000000005689709 0.08381882440832712 0.6716382962672804 3.395840832913221 0.3298207228423068 0.28596198437598935 255.35979353903755 1.555785969208089 7.222337420894512 80.28044058661743 0.09999999986898962 1.0000000005689709 2.72420253664594 DILNPDS(ph)SMETSPDFFF ddPTM_KYSE-520_SHP099_60min_R1 3 DILNPDSSMETSPDFFF 17 0 Q16666-3;Q16666-2;Q16666;Q16666-6;A0A0A0MRB1 Q16666-3 IFI16 Gamma-interferon-inducible protein 16 1 DILNPDS(0.592)S(0.407)MET(0.001)SPDFFF;DILNPDS(0.622)S(0.374)MET(0.004)SPDFFF;DILNPDS(0.647)S(0.352)METSPDFFF 113.77 0.00014401 289991000.0 74557.0 103291.0 83771.0 50741.1 75364.0 89425.0 64409.6 92160.0 108988.0 110123.0 True False 70421.17458430529 98328.74531704806 89171.01269833898 55563.51888813198 81294.71803749695 88866.86540448053 70920.75094511884 91840.31847030565 89198.52656389865 109147.39589439768 0.6451933553452728 0.900880360097488 0.8169779220808323 0.5090686629105728 0.7448159195309729 0.8141913480964862 0.64977043532707 0.841433895126211 0.8172300019892369 1.0 16.73591818447183 -8.111769982296801 1.083324250513737 0.9979979934043978 0.7319945853992211 0.37134518142381023 0.10641045305700525 0.7337754919657504 1.8588954181570891 0.10379503069209867 0.03339079419161105 7.730899324286963e-09 8.111769982296801 -0.26600340800517663 DILNPDSS(ph)METSPDFFF ddPTM_KYSE-520_SHP099_60min_R1 1 DILNPDSSMETSPDFFF 17 0 Q16666-3;Q16666-2;Q16666;Q16666-6;A0A0A0MRB1 Q16666-3 IFI16 Gamma-interferon-inducible protein 16 1 DILNPDS(0.075)S(0.911)MET(0.014)SPDFFF 116.01 0.00012984 119710000.0 35022.0 52081.0 37362.0 26490.0 34273.0 44526.0 32869.0 39634.0 45470.0 57998.0 True False 33079.259845373854 49578.95058482523 39770.414301313634 29007.601635491097 36970.09011330517 44248.09671791893 36191.71929052675 39496.518904645134 37213.79420542145 57484.182841761205 0.5754497708775357 0.8624798707029202 0.6918496938678087 0.5046188395047969 0.6431350031551126 0.7697438587536727 0.6295943945163666 0.6870849849839326 0.6473745013973881 1.0 15.810877422999319 -10.443009570188023 3.1354028212704104 1.0058896382945597 0.6712499818712644 0.5326712711909948 0.09326537759534421 117772513.9131392 145299630.339492 6110525.998333359 0.023761751811438882 3.6057069733609125e-11 10.443009570188023 -0.3346396564232953 DILS(ph)FDK ddPTM_KYSE-520_SHP099_60min_R1 4 DILSFDK 7 0 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 1 DILS(1)FDK;DILS(1)FDK;DILS(1)FDK;DILS(1)FDK 111.61 0.0029361 207954000.0 722600.0 637739.0 582962.0 652190.0 660098.0 637939.0 642383.0 731660.0 732057.0 659082.0 True False 682515.9375326132 607101.061174245 620540.6632921793 714173.9415119262 712043.9571561436 633957.3860695434 707321.34269392 729122.042230728 599133.9024552054 653243.0462380367 1.0448116385825401 0.929364751252204 0.9499384139881974 1.0932744644199195 1.0900138336821734 0.9704770524852006 1.0827843430822799 1.1161573727109244 0.9171684350955734 1.0 19.317260336597805 -5.247287531983404 24.78051376346262 1.0445441306932728 0.9701709129984395 0.16293699608058376 0.06509479791606501 1122.3940880399814 1965358.0078499676 0.01730422981852022 0.02980327855059646 5.6586452484402735e-06 5.247287531983404 -0.0743732176948333 DILS(ph)PDMISPPLGDFR ddPTM_KYSE-520_SHP099_60min_R1 2 DILSPDMISPPLGDFR 16 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 DILS(1)PDMISPPLGDFR;DILS(1)PDMISPPLGDFR 232.93 6.269e-23 166912000.0 81677.0 77065.0 79196.0 100368.0 93701.0 148475.0 125297.0 185437.0 198476.0 183398.0 True False 77146.21399093715 73362.68172307673 84301.10087808018 109906.94454326056 101074.73561423867 147548.31245099523 137963.24354087835 184793.76232832117 162437.7615728001 181773.23640148513 0.42440909078904887 0.40359451795774565 0.4637706988496543 0.6046376612919381 0.5560485009519964 0.8117163745993011 0.7589854605226755 1.0166170003166173 0.893628593452677 1.0 17.471780272685912 -6.284940437453158 0.6233385505933937 1.0038236304896977 0.386552908546759 0.926695678332811 0.06009633076107807 0.1834773249363997 0.15528746665091808 0.0453725174953107 0.048586781576659896 5.188711961091951e-07 6.284940437453158 -0.6172707219429387 down DILSPDMIS(ph)PPLGDFR ddPTM_KYSE-520_SHP099_60min_R1 2 DILSPDMISPPLGDFR 16 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 DILSPDMIS(1)PPLGDFR;DILSPDMIS(1)PPLGDFR 124.09 0.00010986 69263000.0 99264.0 103775.0 108148.0 80323.0 86015.0 102760.0 91623.0 97704.0 140378.0 124125.0 True False 93757.6280421218 98789.49323054934 115119.39312291823 87956.87377000942 92783.89114159679 102118.63672311351 100885.14699430858 97365.08762828505 114888.89384140412 123025.34906778869 0.7621000773625932 0.8030011211438624 0.9357371793311137 0.714949190849635 0.7541851483832943 0.8300617514756631 0.8200354460178727 0.7914229739322709 0.9338635875611191 1.0 16.908596084362724 -7.897533614272815 3.419795332116828 0.9985442842992434 0.8028050062007264 0.5963277670747524 0.055597362590696905 0.15238445437073614 3.34669652845717 0.054401780220555314 0.014535096594256239 1.266095268294752e-08 7.897533614272815 -0.195739278098517 DINTFLGT(ph)PVQK ddPTM_KYSE-520_SHP099_60min_R1 7 DINTFLGTPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DINTFLGT(1)PVQK;DINT(0.001)FLGT(0.999)PVQK;DINTFLGT(1)PVQK;DINTFLGT(1)PVQK;DINTFLGT(1)PVQK;DINTFLGT(1)PVQK;DINTFLGT(1)PVQK 204.82 6.6536e-08 2427720000.0 5720480.0 5765020.0 4905730.0 4297880.0 4048870.0 4871430.0 4676810.0 5855800.0 6114970.0 5931400.0 True False 5403153.5709058335 5488059.785728556 5221961.205245531 4706349.222995258 4367493.034080992 4841025.598404788 5149587.596067061 5835487.596553992 5004645.593849264 5878852.410559369 0.9190830443711933 0.9335256955713183 0.8882620009078719 0.800555770806883 0.7429159177795089 0.823464387319798 0.8759511612874596 0.9926235919909322 0.8512963490731816 1.0 22.487103128607174 -10.753394101059726 6.546765933511637 1.0031867829580579 0.8688333024408301 0.25183060609880836 0.06733885104250731 0.0035992462708190113 0.00013557750996516716 0.07492315920749933 0.017781222257008993 1.7644359544196072e-11 10.753394101059726 -0.13435348051722773 DINTFVGT(ph)PVEK ddPTM_KYSE-520_SHP099_60min_R1 7 DINTFVGTPVEK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 DINT(0.001)FVGT(0.999)PVEK;DINTFVGT(1)PVEK;DINTFVGT(1)PVEK;DINTFVGT(1)PVEK;DINTFVGT(1)PVEK;DINTFVGT(1)PVEK;DINTFVGT(1)PVEK 278.08 1.1945e-21 9053800000.0 6818410.0 6150100.0 5705130.0 4998070.0 4900370.0 5171770.0 5479770.0 6432740.0 6749840.0 6171390.0 True False 6440179.205136638 5854639.9645117 6072891.8083307445 5473085.070075466 5286001.239708725 5139491.065059328 6033718.629001476 6410426.326352801 5524239.205619577 6116716.285868766 1.0528817921496796 0.9571540824997015 0.992835293400927 0.8947750417523438 0.8641893775457247 0.8402369547420262 0.9864310108580585 1.0480176007447957 0.9031380478414591 1.0 22.544325929842756 -9.934379226917775 22.70822497209174 0.99999999983657 0.9471357931219919 0.046187944679880855 0.06933772377431677 0.0 0.0 0.07204461746726855 0.01747338632792749 1.1631099556284845e-10 9.934379226917775 -0.05286420671457803 DIPRT(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 DIPRTPSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DIPRT(0.996)PS(0.004)R 101.39 0.0041103 0.0 147840.0 145580.0 160630.0 106390.0 161510.0 150390.0 131700.0 134470.0 152500.0 139870.0 True False 139639.02048826675 138586.1182799652 170984.4668170871 116501.27361268007 174219.9181338055 149451.3602256619 145013.52126813633 134003.554955534 124809.8442121568 138630.86061721333 1.007272261504869 0.9996772555760749 1.2333795379746528 0.8403704131532637 1.256718146004016 1.0780526035853306 1.0460406912465672 0.9666213883324564 0.9003034653069129 1.0 17.080888926020684 -7.240949690915617 3.1321781119930288 0.9456958310975162 1.0709311755280428 0.16831996913034208 0.11331262041177201 0.4402209743885148 8.799553499291688 0.0637345594078714 0.030430187746134547 5.741829722546435e-08 7.240949690915617 0.12523534443052664 DIPRTPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 DIPRTPSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DIPRT(0.156)PS(0.844)R 63.693999999999996 0.047661 1119100000.0 1549600.0 1346600.0 1448000.0 1419200.0 1327000.0 1521000.0 1167500.0 1337200.0 1699000.0 1310800.0 True False 1463640.598948986 1281907.3147121912 1541340.396881916 1554080.3413019595 1431427.3504028239 1511506.874813696 1285522.2937019682 1332561.5653048262 1390504.4283046203 1299187.331786968 1.1265816431074807 0.9866993645550646 1.1863881052179583 1.1961941925375754 1.1017867211143186 1.163424887105921 0.9894818570419677 1.0256885459866312 1.0702878594051946 1.0 20.309178039489748 -6.762877330748864 24.99998745795379 1.0235052714781023 1.1251951444423827 0.44043759047932685 0.05820772963348394 41.03150371469396 713342.8196112408 0.024660541055739987 0.0176411661312979 1.7263254347807793e-07 6.762877330748864 0.10168987296428034 DIQHWESLKPEER ddPTM_KYSE-520_SHP099_60min_R1 1 DIQHWESLKPEER 13 1 P31350;P31350-2;A0A286YFD6;C9JXC1 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 0 125.97 6.4855e-05 297190000.0 684520.0 669210.0 461160.0 614910.0 686770.0 554180.0 467640.0 438960.0 453510.0 530570.0 False True 646548.3110432101 637060.1470953111 490887.1114820889 673350.8615205672 740814.8918132221 550721.1570573663 514913.61492658465 437437.35021403426 371164.01605675556 525869.5625772137 1.2294841859159267 1.2114413771604648 0.9334769426021147 1.2804522441279318 1.4087426702975374 1.0472580963962972 0.9791660357809349 0.8318362220285473 0.7058100382112481 1.0 19.004345470229175 -6.803023689150686 2.1507411971019863 0.8351186764022809 1.1998675431958934 0.5825633759155011 0.1332922504737764 0.23178443141540855 2.18967963069133 0.07003693039985406 0.04395195141925457 1.5738970118894286e-07 6.803023689150686 0.3647488667936125 DIQLAR ddPTM_KYSE-520_SHP099_60min_R1 8 DIQLAR 6 0 Q71DI3;P68431;K7EK07;Q16695;P84243;Q6NXT2 Q71DI3 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A;H3F3C Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3;Histone H3.3C 0 ;;;;;;; 161.58 0.046174 182370200000.0 28833200.0 33395600.0 99827100.0 33343600.0 55645400.0 26350500.0 53343900.0 25273700.0 129374000.0 35487400.0 False True 27233764.918440808 31791225.248182416 106262114.59500727 36512565.71888111 60024376.400983594 26186036.755278338 58736421.99829408 25186031.433625925 105882942.85313807 35173009.244779415 0.7742802081252972 0.9038528670361367 3.021126621708642 1.0380847844089576 1.7065465164853009 0.7444923626819057 1.6699288249558029 0.716061320154578 3.0103464311588253 1.0 25.06796543496658 -7.7394680469968025 24.99997176432914 2.0051768591338663 1.3602386232476191 0.10241997359599508 0.8027865393199849 490.60105048503397 558231.4105507396 0.5217675540842772 0.19685007049872727 1.8219311158477316e-08 7.7394680469968025 -0.6449382358862472 DIQLARR ddPTM_KYSE-520_SHP099_60min_R1 6 DIQLARR 7 1 Q71DI3;P68431;K7EK07;Q16695;P84243;Q6NXT2 Q71DI3 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A;H3F3C Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3;Histone H3.3C 0 ;;;;; 176.66 0.00092225 72313300000.0 4065180.0 4241820.0 19527300.0 3968290.0 8989490.0 3196600.0 8132800.0 3089420.0 22724200.0 4710280.0 False True 3839676.3616645755 4038036.600098369 20786061.002784677 4345435.088490112 9696911.719798556 3176648.83368144 8954942.79247911 3078703.5230960497 18598058.110464886 4668550.583742385 0.8224557692564679 0.8649443821301417 4.45235852754159 0.9307889055807855 2.077071147856206 0.6804357748085033 1.9181419654450194 0.6594559634455351 3.9836899647676915 1.0 22.154543284095595 -4.583029418223816 24.99999877346678 1.922966504134412 0.8326702250616168 0.11293244398088043 1.2507960204926813 136.828158396075 56867.890585696055 0.30471519135206115 0.8062008393632305 2.6119844179011347e-05 4.583029418223816 -1.090296279072795 DIQRPDS(ph)EHGLS(ph)PDSENFDWK ddPTM_KYSE-520_SHP099_60min_R1 1 DIQRPDSEHGLSPDSENFDWK 21 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 2 DIQRPDS(0.99)EHGLS(0.984)PDS(0.026)ENFDWK 55.662 0.032638 740640000.0 477030.0 475760.0 367530.0 482100.0 390390.0 431510.0 422790.0 439780.0 531350.0 473240.0 True False 450568.1949642711 452903.77546968067 391221.5718687914 527918.63905135 421111.4719847457 428816.7860294925 465529.73923276615 438254.5058254237 434870.2342434722 469047.461775149 0.9606025651627202 0.9655819770469044 0.834076727306403 1.1255121966834616 0.8978014088190872 0.9142289874176056 0.9925002844508107 0.9343500211403196 0.9271348204245041 1.0 18.83937438737623 -10.187770812246063 4.943049320061402 1.000004776299711 0.9505711343593654 0.04177084746113613 0.07153817980221118 3.5901302661156094e-06 5.899342784448844e-07 0.06603966238617386 0.01601542318052807 6.489768240402901e-11 10.187770812246063 -0.04943364194034572 DIQRPDSEHGLS(ph)PDSENFDWK ddPTM_KYSE-520_SHP099_60min_R1 1 DIQRPDSEHGLSPDSENFDWK 21 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 DIQRPDSEHGLS(0.993)PDS(0.007)ENFDWK 105.03 1.7684000000000002e-05 0.0 92733.0 108960.0 119850.0 221800.0 120890.0 83513.0 99535.0 92014.0 121480.0 88239.0 True False 87588.91563134751 103725.39804770568 127575.72276677999 242879.80531339868 130403.35522999045 82991.76438942563 109596.96916798742 91694.82491022901 99422.29426159212 87457.27110890317 1.0015052438839582 1.1860122861430833 1.4587205974894952 2.7771253577185244 1.4910521855593935 0.9489407036961282 1.2531487408464363 1.048452847288697 1.1368099301633814 1.0 16.41629071288655 -6.1397831647774295 5.811647031143759 1.0944294983620768 1.6298141512245619 0.2421088701026204 0.4474695578980643 0.3784141726605145 16.486416845681834 0.1620557403588316 0.16244271995941373 7.247977478943046e-07 6.1397831647774295 0.535384652862485 DIREEAEK ddPTM_KYSE-520_SHP099_60min_R1 4 DIREEAEK 8 1 P25788-2;P25788;G3V4X5;H0YJ03 P25788-2 PSMA3 Proteasome subunit alpha type-3 0 ;;; 144.77 0.00058025 1492040000.0 2381040.0 2482720.0 1757810.0 1372940.0 2164370.0 2318980.0 1452370.0 1827530.0 2283810.0 1854910.0 False True 2248958.964714436 2363446.4045613054 1871121.2451954435 1503423.8048105356 2334693.6054192567 2304506.385638047 1599189.7333652491 1821190.7249787077 1869127.67416502 1838476.940498141 1.2232728706975642 1.2855458518402314 1.0177561676071158 0.8177550513106671 1.2699063850029384 1.2534866959025517 0.8698448689445861 0.9905975347644287 1.016671807511806 1.0 20.810079650658633 -4.764013402340894 24.99038298216982 1.0324873416459464 1.2544094057986255 0.3064697680082564 0.1352728178356891 79.95155748308649 776259.4710822628 0.037478384665722855 0.08425738091269822 1.721815438889412e-05 4.764013402340894 0.22192206415267912 DIRPVCR ddPTM_KYSE-520_SHP099_60min_R1 2 DIRPVCR 7 1 O00148;K7EQN7;O00148-3;O00148-2 O00148 DDX39A ATP-dependent RNA helicase DDX39A 0 ; 84.244 0.010506 3206500000.0 236210.0 218152.0 105431.0 197238.0 204530.0 201413.0 123177.0 203310.0 194507.0 147841.0 False True 223106.96042703878 207671.6504671722 112227.25095556436 215983.440218233 220625.34738348878 200155.9067566412 135628.93325167222 202604.76506291082 159189.43192245252 146531.24375855768 1.5225896860239332 1.4172516737069176 0.7658929800697204 1.4739753425836815 1.5056539596907903 1.3659606075987583 0.9255973659457268 1.382672799780138 1.086385591490317 1.0 17.160848786931865 -7.825919833590465 0.5694066096237914 0.9988411249733833 1.3224785652074853 0.1569682096028523 0.23897517466274742 1.8064750351606496 1.4315714112983227 0.25943798688047276 0.12452601459842745 1.49306998990244e-08 7.825919833590465 0.323637440234102 DIS(ph)ENKR ddPTM_KYSE-520_SHP099_60min_R1 4 DISENKR 7 1 E9PKE3;P11142;E9PNE6;A8K7Q2;P11142-2;E9PN89 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 1 DIS(1)ENKR;DIS(1)ENKR;DIS(1)ENKR;DIS(1)ENKR 114.97 0.0018082999999999999 8158340000.0 8795310.0 7460220.0 6650020.0 7220880.0 7586240.0 7759100.0 7865490.0 7365200.0 8881680.0 8129420.0 True False 8307416.621284202 7101819.833181477 7078690.929608196 7907150.264163258 8183233.928198886 7710672.578808001 8660610.488984909 7339651.840250598 7268990.80093264 8057399.663393054 1.0310294844907648 0.8814034465048278 0.8785329293976323 0.9813526192684198 1.015617230131643 0.9569678681621904 1.0748642056732527 0.9109206626049123 0.9021509549734303 1.0 22.941882887231824 -3.8978742450994504 15.109618075279037 0.9569441557335479 3.618221610539411 0.1215196555876703 0.06064026987393195 2084176.9220964503 3273289.234587931 0.015935175997209824 185608393.5780678 0.00012651026192736994 3.8978742450994504 2.6612774548058633 DIS(ph)LAFFEAAS(ph)MMR ddPTM_KYSE-520_SHP099_60min_R1 1 DISLAFFEAASMMR 14 0 A0A5F9ZH32;A0A5F9ZH07;A0A5F9ZHN8;A0A5F9ZI39;P23458 A0A5F9ZH32 JAK1 Tyrosine-protein kinase JAK1 2 DIS(1)LAFFEAAS(1)MMR 50.305 0.064359 0.0 444070.0 395120.0 334300.0 303340.0 383440.0 375630.0 356980.0 428040.0 513300.0 399550.0 True False 419436.5518684024 376137.84211278864 355849.51289891195 332169.34239750315 413614.5465248363 373285.55383712635 393067.02218906104 426555.22914528754 420097.65924000024 396010.2978451965 1.0591556688062778 0.9498183359358595 0.8985865136214621 0.8387896582612372 1.0444540174218435 0.9426157750651387 0.9925676789918074 1.077131659116681 1.0608250884531787 1.0 18.595178421047326 -7.0321841669333836 3.712458357227417 1.051089050669215 0.9517847345203186 0.29094666791142276 0.06268251121638388 0.28761807010184465 8.356806821506984 0.03188074770760165 0.018510546285916463 9.285725327758175e-08 7.0321841669333836 -0.09930431614889634 DIS(ph)LDSELHDLR ddPTM_KYSE-520_SHP099_60min_R1 2 DISLDSELHDLR 12 0 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 DIS(1)LDSELHDLR;DIS(0.996)LDS(0.004)ELHDLR 157.23 4.2743e-06 128632000.0 159949.0 176397.0 161667.0 202733.0 165156.0 159787.0 144464.0 142913.0 192509.0 158705.0 True False 151076.3101195735 167922.62334270493 172088.31349634592 222000.68336610083 178152.83759090313 158789.71006302195 159067.8309527719 142417.26815914508 157554.2183569713 157298.99717062173 0.960440389557611 1.0675377870372549 1.094020410757497 1.4113292987195423 1.1325745287343523 1.0094769383099325 1.0112450416974466 0.9053920922627721 1.0016225226539286 1.0 17.263149947596116 -6.325927329201767 3.799075923463806 0.9769439850006918 1.1432111401041996 0.31129073820654285 0.10999117254942352 0.30838869824457066 8.882804055929775 0.04366424965377013 0.038838498928508526 4.721420385103225e-07 6.325927329201767 0.16626715510350776 DISENKR ddPTM_KYSE-520_SHP099_60min_R1 8 DISENKR 7 1 E9PKE3;P11142;E9PNE6;A8K7Q2;P11142-2;E9PN89 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ;;;;;;; 173.68 0.0012036 85581900000.0 58324900.0 54899300.0 29582000.0 31604200.0 56167100.0 56928900.0 39947400.0 46856800.0 44519900.0 60661000.0 False True 55089501.52919436 52261855.22247065 31488903.05287354 34607853.66585075 60587131.22291669 56573585.618396714 43985673.041053526 46694264.697259314 36436208.415349476 60123590.73354379 0.9162709821065155 0.8692404193569402 0.5237362351231867 0.5756118895031754 1.0077097938382826 0.9409548719257301 0.7315875932292465 0.7766379906383059 0.6060218288829048 1.0 25.841427837450883 -4.541930847426318 24.97229642965932 0.7637419853566924 0.9045136986120206 0.08474495506479163 0.1630804509120811 504.43406606966636 661179.2769866213 0.04357430151809038 0.11532196186359199 2.871237731908287e-05 4.541930847426318 0.14077171325532822 DISGPS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 8 DISGPSPSK 9 0 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 DISGPS(0.997)PS(0.003)K;DISGPS(0.995)PS(0.005)K;DIS(0.002)GPS(0.996)PS(0.002)K;DISGPS(0.999)PS(0.001)K;DIS(0.001)GPS(0.998)PS(0.001)K;DIS(0.001)GPS(0.999)PS(0.001)K;DIS(0.001)GPS(0.997)PS(0.002)K;DIS(0.001)GPS(0.997)PS(0.002)K 208.03 9.672200000000001e-09 11687020000.0 25114500.0 23002000.0 19707600.0 18422600.0 18525400.0 21956500.0 19047500.0 21600300.0 25577600.0 21660200.0 True False 23721348.620485473 21896949.393294085 20977983.42927489 20173478.36504335 19983243.58489257 21819461.33914986 20973007.185685825 21525373.600847933 20933352.59882531 21468307.479380626 1.1049473109731074 1.0199662648918715 0.9771605632825657 0.9396864836419497 0.9308252923098668 1.016356848815702 0.9769287684103408 1.002658156518492 0.9750816462327495 1.0 24.35570512055239 -4.344246995536896 2.2535033406871814 0.9758486361678278 1.1248156258805693 0.7054229848530253 0.025146902676788728 0.2865358921018566 1.9484804194935315 0.007157641903385002 0.07891718875737722 4.526400774909047e-05 4.344246995536896 0.14896698971274147 DISGPS(ph)PSKK ddPTM_KYSE-520_SHP099_60min_R1 9 DISGPSPSKK 10 1 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 DIS(0.001)GPS(0.694)PS(0.305)KK;DISGPS(0.986)PS(0.014)KK;DISGPS(0.868)PS(0.132)KK;DISGPS(0.897)PS(0.102)KK;DIS(0.003)GPS(0.988)PS(0.009)KK;DISGPS(0.853)PS(0.147)KK;DISGPS(0.918)PS(0.082)KK;DISGPS(0.997)PS(0.003)KK;DISGPS(0.771)PS(0.229)KK 192.68 6.9284e-08 58692300000.0 28193000.0 24102800.0 23606080.0 21156900.0 21748250.0 22716700.0 21778960.0 23318300.0 27151900.0 22614730.0 True False 26629078.088647854 22944865.308959633 25127765.687863413 23167645.414946087 23459713.544384494 22574916.648968015 23980589.818966508 23237414.259832162 22221799.403698772 22414381.08619368 1.1880353950549296 1.0236671367692909 1.1210555219542093 1.033606296147806 1.0466366862493783 1.0071621679919245 1.069875171959914 1.0367189783413397 0.9914081195570673 1.0 24.417921327945148 -1.0000000000000002 0.646733737730394 1.0285717614691594 12.997142729132287 0.5927257989401642 0.036872602503460625 158.22116613123734 1.0339681175324895 0.014838557279316175 2708.9798520118884 0.09999999999999995 1.0000000000000002 11.968570967663128 DISLSDYK ddPTM_KYSE-520_SHP099_60min_R1 4 DISLSDYK 8 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ;;; 133.55 0.0057344 1606180000.0 2464500.0 3095000.0 2180530.0 1753190.0 2691480.0 3103000.0 2413250.0 2800610.0 2737680.0 2929270.0 False True 2327789.2721410496 2946311.5543102887 2321090.452771355 1919812.6504842073 2903284.16357362 3083633.0260005896 2657204.8610503385 2790895.337577288 2240586.323296637 2903318.946737574 0.8017683605711868 1.0148080897625888 0.7994610634768659 0.66124758791709 0.9999880195167695 1.0621061903879463 0.9152300900444331 0.9612775546804408 0.7717327528945306 1.0 21.46927163856776 DISMEIDS(ph)PENMMR ddPTM_KYSE-520_SHP099_60min_R1 4 DISMEIDSPENMMR 14 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 DISMEIDS(1)PENMMR;DISMEIDS(1)PENMMR;DISMEIDS(1)PENMMR;DISMEIDS(1)PENMMR 273.38 4.6812e-25 865605000.0 875830.0 794410.0 732080.0 704406.0 748360.0 830500.0 713180.0 847230.0 954130.0 769170.0 True False 827245.9639761794 756245.351166279 779271.0481694143 771352.534452613 807251.6744140596 825316.5414416663 785275.1943660554 844291.1568749682 780884.0436599681 762355.7522052054 1.0851180194853536 0.9919848430063638 1.022188192212467 1.0118012912231373 1.0588910388345434 1.0825871504928497 1.0300639722262905 1.1074766005670644 1.024303996396915 1.0 19.54010486083231 -5.773689495969742 24.742886524617123 1.0565048066058353 1.024817862888592 0.07077877053569648 0.03619858132120712 367.5802298949884 742440.3920773227 0.010552351066526775 0.012054061079031697 1.6838775391699788e-06 5.773689495969742 -0.03168694371724334 DISQNKR ddPTM_KYSE-520_SHP099_60min_R1 2 DISQNKR 7 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 104.21 0.01038 990310000.0 865430.0 976400.0 398600.0 518870.0 1101560.0 1371570.0 843340.0 781670.0 877660.0 2383150.0 False True 817422.8727080661 929492.2783937206 424294.3937825495 568183.2487960457 1188246.5049809592 1363009.5228719427 928593.0374052408 778958.5692131491 718299.0680081407 2362037.1450626417 0.34606690009796093 0.39351298108780175 0.17963070338222692 0.24054797359292895 0.5030600418222664 0.577048301598913 0.3931322753946845 0.3297825230400816 0.3041015123363317 1.0 21.171600221856153 -10.978624493443263 2.6001794249367163 1.5585111008004524 0.3652165997222052 0.7514284557379727 0.10990686390928239 15036946.69967091 6641112.564115175 50463773.222578384 0.03091231853842725 1.0504502930390768e-11 10.978624493443263 -1.1932945010782472 DITDPLSLNTCTDEGHVVLAS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 14 DITDPLSLNTCTDEGHVVLASPLK 24 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK;DITDPLSLNTCTDEGHVVLAS(1)PLK 272.54 5.0226e-38 92928570000.0 12182670.0 14221680.0 10712660.0 9430120.0 9404800.0 13225500.0 9587600.0 11501370.0 14686050.0 13485310.0 True False 11506873.009549452 13538449.145623103 11403215.204462042 10326355.769531041 10144904.254007876 13142954.74874988 10556808.173958862 11461474.431909949 12019433.525193093 13365840.644812422 0.8609165196066828 1.0129141522331162 0.8531610923318828 0.7725930634627856 0.7590172981708665 0.9833242141676253 0.7898349572240481 0.8575199073885712 0.8992650626773784 1.0 23.67204724297935 -9.19221611858447 11.093041023464652 0.9999881428552239 0.864529514316696 0.20635012864851 0.07917864920048769 0.0 0.0 0.07902599365952166 0.01916661876632938 6.423679752720601e-10 9.19221611858447 -0.13545862853852786 DITRPS(ph)RPASYKK ddPTM_KYSE-520_SHP099_60min_R1 2 DITRPSRPASYKK 13 3 Q9UKE5-2;Q9UKE5;Q9UKE5-5;Q9UKE5-3 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 1 DIT(0.01)RPS(0.99)RPAS(0.001)YKK;DIT(0.001)RPS(0.838)RPAS(0.161)YKK 112.36 0.00019255 5477700000.0 4885300.0 3755800.0 3465500.0 4281600.0 3533100.0 3763900.0 3670600.0 4305000.0 4685500.0 3371700.0 True False 4614302.670395891 3575365.7304292712 3688891.6749960533 4688521.976690016 3811134.8694108585 3740408.1039521904 4041660.069603803 4290066.95979455 3834731.311843026 3341829.361142905 1.3807714792528487 1.0698827929402406 1.1038539902391824 1.402980664185242 1.140433713858882 1.119269627421363 1.209415452685339 1.2837480601724525 1.1474946496165648 1.0 21.672206638415087 -8.017719170370286 22.452661673880833 0.9999999930423412 1.2065045895236821 0.26483808541957066 0.10776120995641555 417.9972014319496 529662.8782364927 0.10232535138537165 0.02642029211175077 9.600212133211697e-09 8.017719170370286 0.2065045964813409 DIYDKDNYELDEDT(ph)D ddPTM_KYSE-520_SHP099_60min_R1 2 DIYDKDNYELDEDTD 15 1 Q9UBW7 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 DIYDKDNYELDEDT(1)D;DIYDKDNYELDEDT(1)D 193.77 1.1983000000000001e-10 634070000.0 1531070.0 1438170.0 1298400.0 1268670.0 1263490.0 1359990.0 1310260.0 1302870.0 1583870.0 1320800.0 True False 1446138.4949876254 1369078.1544628188 1382096.941513452 1389244.0153604555 1362919.474725292 1351501.7979473246 1442713.867705303 1298350.6480621442 1296279.1341134994 1309098.7395668498 1.1046825203315978 1.0458173345394977 1.0557621818280534 1.0612217194710034 1.0411128156583898 1.0323910314011187 1.102066501250061 0.9917897014336277 0.9902073044103671 1.0 20.320142486860245 -7.285967229535339 24.728468126054068 0.9932488548158562 1.0602102838316299 0.6602683475334774 0.022700817870773674 429.11362004862104 432620.5749278351 0.012101741448178997 0.005817623996417641 5.176458903707756e-08 7.285967229535339 0.06696142901577362 DIYLS(ph)PDRTGSSFGK ddPTM_KYSE-520_SHP099_60min_R1 2 DIYLSPDRTGSSFGK 15 1 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 DIYLS(1)PDRTGSSFGK;DIYLS(0.661)PDRT(0.269)GS(0.057)S(0.012)FGK 126.84 4.7838999999999994e-05 539910000.0 650000.0 656850.0 648100.0 489530.0 518740.0 482300.0 426230.0 453400.0 765410.0 445960.0 True False 613943.2042571241 625293.940048049 689877.5629966637 536054.7840174385 559561.8867731428 479289.7867998989 469317.4880039316 451827.26122435584 626430.8384159137 442009.14135163004 1.388983047680265 1.414662914291655 1.5607766863985462 1.212768546773092 1.265950937263527 1.0843436073160557 1.0617823119422252 1.0222124814946196 1.4172350293487965 1.0 18.753716681262315 -5.6006975608557354 1.8068642987402301 1.1238125889609931 1.4485159418199112 0.544671702228396 0.12612568136094 0.26285060352353684 1.7489078129908784 0.04172703724219228 0.06287784585177038 2.5078550949535314e-06 5.6006975608557354 0.32470335285891805 DKADKDEQIR ddPTM_KYSE-520_SHP099_60min_R1 1 DKADKDEQIR 10 2 A0A494C1B7;A0A1W2PQ90;Q92878-3;Q92878;Q92878-2;H7C0P8;A0A494C0Y7;A0A494BZX5;A0A494C122 A0A494C1B7 RAD50 DNA repair protein RAD50 0 91.31299999999999 0.0023014 866540000.0 581600.0 644550.0 414570.0 372360.0 732150.0 683720.0 551730.0 670890.0 613160.0 532860.0 False True 549337.4886091441 613584.8505107256 441293.84553545254 407748.9824458841 789766.0396363416 679452.6498669438 607504.2527658987 668562.8391769029 501825.60050574533 528139.2749588067 1.0401375444990164 1.1617860659171455 0.8355633948448014 0.7720482111043291 1.495374567055141 1.2865027883410851 1.1502728192545086 1.2658835857815134 0.9501766376774123 1.0 19.010558905528853 -5.746434411053843 24.999953338991094 1.2073645874492778 0.9589968610858672 0.3088362805968117 0.1740504108718883 303.6422726592997 505899.6600672742 0.05303803939575976 0.06819552675320738 1.7929393090183431e-06 5.746434411053843 -0.24836772636341053 DKAIT(ph)PPLPESTVPFSNGVLK ddPTM_KYSE-520_SHP099_60min_R1 2 DKAITPPLPESTVPFSNGVLK 21 1 Q92667-2;Q92667;I3NI36 Q92667-2 AKAP1 A-kinase anchor protein 1, mitochondrial 1 DKAIT(1)PPLPESTVPFSNGVLK;DKAIT(1)PPLPESTVPFSNGVLK 126.99 0.00012871 2255600000.0 1950480.0 2916800.0 2003740.0 1923330.0 1941270.0 2765800.0 1897630.0 2369300.0 3080200.0 2257300.0 True False 1842282.986214515 2776672.5497939386 2132904.2864973564 2106122.704929748 2094036.9046846167 2748537.616278583 2089460.9594840829 2361081.4512987784 2520913.325523185 2237302.0781528275 0.8234395364865302 1.241080753872284 0.9533376414946771 0.941367160695893 0.9359652078871289 1.2285053695332213 0.9339199117935805 1.0553252841244158 1.1267648433082913 1.0 21.093328630026367 DKALQLSNS(ph)PGASSAFLK ddPTM_KYSE-520_SHP099_60min_R1 1 DKALQLSNSPGASSAFLK 18 1 Q12802-2;Q12802;Q12802-4;H0YMW2 Q12802-2 AKAP13 A-kinase anchor protein 13 1 DKALQLS(0.153)NS(0.847)PGAS(0.001)SAFLK 61.222 0.032545 0.0 223100.0 211380.0 175620.0 145930.0 144940.0 138980.0 104850.0 151040.0 248000.0 143780.0 True False 210724.1982611762 201224.98751215157 186940.74620193514 159799.1433245455 156345.9534042087 138112.57426798667 115449.26123738883 150516.07749300107 202969.45157124512 142506.22105914738 1.4787017485623652 1.4120435305672225 1.3118076166256991 1.1213485427995502 1.0971166889571586 0.969168736925968 0.8101348865988908 1.0562070650272115 1.424284849199688 1.0 17.120665375435426 -5.1300418075731535 1.4759950261911734 1.0430733294677286 1.47069923134511 0.5422713399076057 0.1447861014988512 0.3514009589033531 1.4512601283268927 0.04938853080812517 0.13528568647413788 7.4123888213856714e-06 5.1300418075731535 0.42762590187738136 DKANMQHR ddPTM_KYSE-520_SHP099_60min_R1 5 DKANMQHR 8 1 P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;H0YBG7;H0YBK1;P55795 P31943;P55795 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 0 ;;;; 125.16 0.0008695 2635980000.0 1964780.0 5257430.0 1594590.0 1371540.0 4011120.0 5570330.0 3082242.0 2359139.0 1798609.0 17705350.0 False True 1855789.736708174 5004855.171236682 1697379.82283421 1501890.7492314635 4326772.3238491155 5535563.5042609945 3393825.1011430738 2350955.69743618 1472026.9448431674 17548494.373553846 0.10575207748334864 0.28520140045627856 0.09672509713381547 0.08558516287840978 0.24656088617891359 0.3154437860266388 0.19339693929854626 0.13396908289631657 0.08388337560523483 1.0 24.064843919642332 -10.84011100021233 2.879364849298933 1.2853333428521636 0.17636575772728913 0.9029490134077752 0.08144066906448166 90675473.96354106 69986446.79398586 178886553.63258433 0.02204365755291095 1.445070381711197e-11 10.84011100021233 -1.1089675851248746 DKAPVQPQQS(ph)PAAAPGGTDEKPSGK ddPTM_KYSE-520_SHP099_60min_R1 13 DKAPVQPQQSPAAAPGGTDEKPSGK 25 2 Q13200;C9JPC0;F8WBS8 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 1 DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK;DKAPVQPQQS(1)PAAAPGGTDEKPSGK 256.77 2.9365999999999996e-31 163431700000.0 47829900.0 38798300.0 39215500.0 36769900.0 37290600.0 39268800.0 39114100.0 40146700.0 45213700.0 38436600.0 True False 45176680.100458175 36934371.430564396 41743393.877018504 40264500.24072641 40225158.06550979 39023708.85317827 43068134.94482923 40007440.46801026 37004031.82462427 38096081.627222344 1.1858615944422022 0.9695057825624821 1.0957398266174938 1.056919728247185 1.0558870190147343 1.0243496755134278 1.1305135096637866 1.0501720586251084 0.971334327417607 1.0 25.183139281150993 DKAS(ph)PEPEKDFSEK ddPTM_KYSE-520_SHP099_60min_R1 11 DKASPEPEKDFSEK 14 2 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 DKAS(1)PEPEKDFSEK;DKAS(0.996)PEPEKDFS(0.004)EK;DKAS(1)PEPEKDFSEK;DKAS(1)PEPEKDFSEK;DKAS(0.998)PEPEKDFS(0.002)EK;DKAS(1)PEPEKDFSEK;DKAS(1)PEPEKDFSEK;DKAS(0.993)PEPEKDFS(0.007)EK;DKAS(1)PEPEKDFSEK;DKAS(0.988)PEPEKDFS(0.012)EK;DKAS(0.794)PEPEKDFS(0.206)EK 124.35 5.6756000000000003e-05 32541540000.0 41008910.0 35693670.0 33030600.0 34052390.0 34669970.0 34995440.0 34443630.0 35457720.0 41350840.0 32857170.0 True False 38734064.013064645 33978892.515909016 35159805.32682857 37288718.907375626 37398299.39385486 34777020.47806064 37925528.25783459 35334725.44521408 33842569.825848006 32566081.03629148 1.1893989936922282 1.0433829135916939 1.0796449621201476 1.145017076688511 1.148381942309189 1.0678908659382533 1.1645714513690046 1.085016198474641 1.0391968805867065 1.0 24.956866782174274 -7.805214774857588 2.3946271540489894 1.0030506812035087 1.1157666165457325 0.46028101881383576 0.04343843258104392 0.25087910930144347 2.77679103554041 0.0401047530591465 0.01130843560079733 1.565976444686717e-08 7.805214774857588 0.1127159353422238 DKAVESLR ddPTM_KYSE-520_SHP099_60min_R1 1 DKAVESLR 8 1 P30153;E9PNM7;C9J9C1;P30154-4;P30154;P30154-3;P30154-2 P30153 PPP2R1A;PPP2R1B Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform;Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform 0 78.655 0.013985 393670000.0 391210.0 338470.0 220850.0 216090.0 308550.0 328270.0 241100.0 265110.0 293500.0 278010.0 False True 369508.8014421992 322209.39314617234 235086.34437249368 236627.12863017266 332831.1295906484 326221.1451644262 265472.740909246 264190.39528713934 240207.79853290506 275547.0476885071 1.3410007639055215 1.1693443854655805 0.8531622688196886 0.8587539972399502 1.2078921998355003 1.1839036124720295 0.9634388868842112 0.9587850695674811 0.8717487650401124 1.0 18.071939144129576 -4.532269290461355 5.066601578365955 0.9950947485154354 1.307580343145773 0.4786764920387566 0.11783553326693276 0.15163673319268234 11.353443801516221 0.033287251701601524 0.10720268719781771 2.9358286851908257e-05 4.532269290461355 0.31248559463033765 DKDAYSSFGSR ddPTM_KYSE-520_SHP099_60min_R1 1 DKDAYSSFGSR 11 1 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;O15523-2;A0A2R8YDH3;O15523;A0A2R8YCU0;A0A2R8Y650;A0A087WX09;A0A2R8YF89;C9J081;C9J8G5;O15523-3;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4 A0A0D9SG12;A0A2R8Y5G6 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 0 113.99 0.00030392 1100800000.0 969350.0 833120.0 620740.0 616960.0 835980.0 891460.0 643270.0 743940.0 680930.0 713710.0 False True 915578.2231486827 793095.6646613848 660753.8936191164 675595.6929042125 901766.8699244553 885896.0674697022 708298.0093102058 741359.445776901 557290.2768484195 707387.0846579776 1.2943100644696754 1.1211622064669833 0.9340768413076013 0.9550579980278602 1.27478560109768 1.252349790776904 1.0012877315291508 1.0480251362453827 0.7878151706966348 1.0 19.432140353257967 -7.342316113531096 2.1244942956527573 0.9068998203247212 1.1222214256446248 0.30716585755207193 0.13146217226849716 0.4568163075011339 3.832709132213099 0.1047246617485083 0.04015263472848013 4.5465700471095865e-08 7.342316113531096 0.21532160531990363 DKDDDEVFEK ddPTM_KYSE-520_SHP099_60min_R1 6 DKDDDEVFEK 10 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ;;;;; 142.97 0.00024067 3470070000.0 9283960.0 9111500.0 6684760.0 5477650.0 8610410.0 9734570.0 7454060.0 8903240.0 8500350.0 9107730.0 False True 8768960.23168457 8673769.863359682 7115670.325594163 5998244.209084479 9288000.2804687 9673812.937774597 8207589.129415072 8872356.738471832 6956900.716385618 9027042.597906709 0.9714100865900437 0.9608650639768835 0.7882615206938565 0.6644750087338038 1.0289084359281195 1.0716480877156676 0.909222377140254 0.9828641708779854 0.7706733009101853 1.0 23.1058219846975 DKDDDEVFEKK ddPTM_KYSE-520_SHP099_60min_R1 6 DKDDDEVFEKK 11 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ;;;;; 167.98 9.709600000000001e-06 12750130000.0 18997700.0 19382100.0 12930020.0 11172090.0 17743900.0 19558900.0 13039570.0 17405400.0 17246500.0 16683500.0 False True 17943859.710023966 18450954.822874762 13763509.777963478 12233882.074588673 19140243.981019326 19436825.65009443 14357736.989539497 17345024.7298509 14114970.348885017 16535697.169566605 1.0851589458864206 1.1158256367220563 0.8323513449009429 0.7398467660078295 1.1575105533648924 1.17544639641002 0.8682873689755536 1.0489442659710675 0.8536060018602146 1.0 23.979080537189795 -7.536750610682215 0.00535074573683637 9.064722912937554e-08 1.960978866596614 0.007497697578844997 0.14495468549761004 37819.1491384368 201.36953073544203 36940.26805749623 36842.141909461156 2.905690739692858e-08 7.536750610682215 1.9609787759493849 DKDDKEDEKEK ddPTM_KYSE-520_SHP099_60min_R1 3 DKDDKEDEKEK 11 3 A0A0C4DG89;Q7L014;D6RJA6 A0A0C4DG89 DDX46 Probable ATP-dependent RNA helicase DDX46 0 ;; 106.17 0.00038867 2102320000.0 921108.0 1906210.0 617828.0 386150.0 1520650.0 4255720.0 1615740.0 609073.0 743652.0 9371200.0 False True 870012.3030567251 1814632.810320457 657654.1814397514 422849.57989976864 1640316.5036850432 4229158.472900823 1779074.7673027995 606960.2679217062 608623.542741369 9288178.458683282 0.09366877552222015 0.19537014909785705 0.07080550663030459 0.04552556583411221 0.17660260415771328 0.4553270042897475 0.19154183731683017 0.06534761047299587 0.06552668485524009 1.0 23.146964261056507 -11.092174906176771 2.556258721631508 2.453335290691545 0.15528433685021584 0.8303042926455363 0.11512026117418431 100148255.17401324 29077531.99009741 847711416.8375859 0.03198358783008887 8.087701124523374e-12 11.092174906176771 -2.2980509538413294 DKDDKISWEEYK ddPTM_KYSE-520_SHP099_60min_R1 4 DKDDKISWEEYK 12 2 Q15293;Q15293-2 Q15293 RCN1 Reticulocalbin-1 0 ;;; 193.51 4.5297e-08 5465180000.0 11876600.0 12170000.0 8148940.0 7364620.0 9780580.0 11231670.0 8206300.0 9349860.0 10576560.0 9517360.0 False True 11217781.322584879 11585334.932457564 8674233.711165 8064551.270546255 10550256.002112165 11161568.981353553 9035872.889769992 9317427.517933732 8656123.317380521 9433043.594794044 1.1892006233042116 1.228165100270642 0.9195583190087429 0.8549256864451427 1.1184360483539686 1.183241534843903 0.9578958052050937 0.9877435023279104 0.917638430310839 1.0 23.16929190445143 -4.751614524218677 24.933629278195717 0.9971628761306479 1.2086829771169125 0.46960431169605077 0.09181955225414755 187.42142510320764 475630.45583121775 0.02568805173774012 0.06617525721905458 1.7716807881898614e-05 4.751614524218677 0.21152010098626461 DKDDQEWES(ph)PS(ph)PPKPTVFISGVIAR ddPTM_KYSE-520_SHP099_60min_R1 3 DKDDQEWESPSPPKPTVFISGVIAR 25 2 P51397 P51397 DAP Death-associated protein 1 2 DKDDQEWES(1)PS(0.999)PPKPTVFIS(0.001)GVIAR;DKDDQEWES(1)PS(0.985)PPKPT(0.013)VFIS(0.003)GVIAR;DKDDQEWES(1)PS(0.993)PPKPT(0.004)VFIS(0.004)GVIAR 71.068 0.01235 902600000.0 614670.0 538140.0 576160.0 543250.0 512970.0 573000.0 480590.0 555400.0 706110.0 481800.0 True False 580573.0297857339 512286.94663539267 613300.1954885938 594880.3166659323 553337.8205999518 569423.6944564424 529172.7273064053 553473.4470313342 577898.2235845648 477531.6268347285 1.215779222067458 1.0727811894492443 1.284313249687343 1.245740142090772 1.15874591232354 1.1924313751338553 1.1081417388288495 1.1590299279232634 1.2101779046868715 1.0 18.86523676018546 -6.744157575713646 22.800083342582834 1.1325899097751568 1.1941343173692474 0.1998117300134571 0.07220976044746599 172.7150794206353 227864.6030487595 0.027454681045899106 0.021192166930896598 1.802363667913798e-07 6.744157575713646 0.06154440759409052 DKDDQEWESPS(ph)PPKPTVFISGVIAR ddPTM_KYSE-520_SHP099_60min_R1 8 DKDDQEWESPSPPKPTVFISGVIAR 25 2 P51397 P51397 DAP Death-associated protein 1 1 DKDDQEWES(0.002)PS(0.998)PPKPT(0.001)VFISGVIAR;DKDDQEWES(0.001)PS(0.993)PPKPT(0.004)VFIS(0.002)GVIAR;DKDDQEWES(0.001)PS(0.999)PPKPTVFISGVIAR;DKDDQEWES(0.079)PS(0.915)PPKPT(0.004)VFIS(0.001)GVIAR;DKDDQEWES(0.007)PS(0.992)PPKPTVFISGVIAR;DKDDQEWES(0.004)PS(0.996)PPKPTVFISGVIAR;DKDDQEWES(0.011)PS(0.989)PPKPTVFISGVIAR;DKDDQEWES(0.001)PS(0.999)PPKPTVFISGVIAR 226.63 7.134e-22 167895900000.0 4948706.0 4894922.0 4899069.0 4979322.0 4780555.0 4829563.0 4474580.0 4978665.0 5758733.0 4576450.0 True False 4674191.413179162 4659762.599692287 5214870.826527551 5452555.265792248 5156757.4808628205 4799419.905881562 4926914.214092467 4961395.173144149 4713092.25304529 4535906.213424227 1.0304867854951836 1.0273057643699732 1.149686651609748 1.2020873027875123 1.1368748025700255 1.0580950487198024 1.086202840682868 1.0938046202235547 1.039062985715329 1.0 22.11295938005701 -7.937768332362882 1.0193481657624428 0.9990786764371257 1.1049604353674785 0.2826421702326546 0.05148678000556629 0.7874554368383805 1.841566298100556 0.055363481828106034 0.01857007859239026 1.1540687136607697e-08 7.937768332362882 0.10588175893035279 DKDEKYS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 DKDEKYSPK 9 2 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 DKDEKYS(1)PK;DKDEKYS(1)PK;DKDEKYS(1)PK;DKDEKYS(1)PK;DKDEKYS(1)PK 141.38 0.00030323 12330390000.0 9638840.0 8288790.0 8160710.0 8479180.0 8246350.0 8421890.0 8469320.0 8369460.0 9569890.0 7621140.0 True False 9104154.330648834 7890584.086672569 8686762.42419766 9285038.717841566 8895290.82968674 8369325.860568532 9325481.518197807 8340428.296706645 7832239.213294942 7553622.628757191 1.2052699450444686 1.0446092523384132 1.1500127622376215 1.2292166519535603 1.1776191725307696 1.10798834835962 1.2345707452600319 1.1041626920775771 1.0368851607011764 1.0 22.84873727933737 -7.695753778030565 2.8105668151770797 1.0078114482203835 1.160367529628386 0.5315044421063342 0.054378480693016276 0.2141954575133582 3.148941020587117 0.049131052163178916 0.014543471695664952 2.0148662485537485e-08 7.695753778030565 0.15255608140800248 DKDGKPLLPK ddPTM_KYSE-520_SHP099_60min_R1 2 DKDGKPLLPK 10 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 0 ; 90.65299999999999 0.0023682 2196080000.0 6731000.0 5334200.0 3982750.0 3849750.0 5889300.0 5805500.0 4737600.0 5888700.0 4878000.0 4798100.0 False True 6357618.012084165 5077937.025202569 4239484.437625308 4215629.082530457 6352754.404466719 5769265.721059121 5216522.842520287 5868273.474132912 3992278.164373118 4755592.566865309 1.3368718877182628 1.0677821856698155 0.891473434281146 0.8864571603343273 1.335849174449819 1.213153910883073 1.0969238363409262 1.2339731361808055 0.8394912112928681 1.0 22.181193687489742 -7.7668042611946815 24.99961168400818 0.9197455861684092 1.1226364643077094 0.23199237004510131 0.1541799273937488 233.21002756073946 1086669.169848854 0.1425868772776502 0.04104865452159583 1.710786201687622e-08 7.7668042611946815 0.20289087813930018 DKDPILR ddPTM_KYSE-520_SHP099_60min_R1 2 DKDPILR 7 1 A0A087WW66;Q99460-2;Q99460;H7C378 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 0 ; 81.548 0.014394 691120000.0 558520.0 587320.0 358210.0 404350.0 651190.0 608130.0 496570.0 563330.0 519100.0 570420.0 False True 527537.782217983 559104.2656147074 381300.7897562645 442779.3024277392 702434.9482357301 604334.43509563 546768.1416561764 561375.9397122099 424844.52544610266 565366.5225800441 0.9330898826668583 0.9889235447886815 0.6744311425023937 0.783172127714815 1.242441708487046 1.0689250441249267 0.967103851782744 0.992941600345165 0.7514497383172409 1.0 19.10882693288417 DKDQPPS(ph)PSPPPQSEALSSTSR ddPTM_KYSE-520_SHP099_60min_R1 1 DKDQPPSPSPPPQSEALSSTSR 22 1 H3BU99;H3BPL8;H3BR21;H3BUX9;Q7L1V2 H3BU99 MON1B Vacuolar fusion protein MON1 homolog B 1 DKDQPPS(0.932)PS(0.068)PPPQSEALSSTSR 136.89 8.7579e-07 873180000.0 182010.0 139500.0 128040.0 149470.0 147780.0 169390.0 170250.0 197960.0 187460.0 186580.0 True False 171913.5424720602 132798.21060623103 136293.6632712434 163675.5838602058 159409.44524681917 168332.77417797004 187460.53147987995 197273.32296421126 153421.98948203895 184927.0463570435 0.9296289853683285 0.7181113483521174 0.7370131408906929 0.8850819124866844 0.862012606522916 0.9102658453375476 1.0136999166576477 1.0667629578819449 0.8296352129359331 1.0 17.496596714817905 -6.092408091640093 1.3245380559841857 0.980406735987611 0.7965241502000872 0.4394874271891973 0.0812431700221323 0.38098804713473094 1.3714473175662683 0.03611505101524513 0.037636696870110564 8.083359765845495e-07 6.092408091640093 -0.1838825857875238 DKDS(ph)GSS(ph)SPLPK ddPTM_KYSE-520_SHP099_60min_R1 1 DKDSGSSSPLPK 12 1 Q86VQ1;H7C0B2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 2 DKDS(0.8)GS(0.239)S(0.736)S(0.224)PLPK 101.61 0.0029154 0.0 485960.0 450720.0 444990.0 452780.0 434760.0 459220.0 410900.0 470010.0 546140.0 495290.0 True False 459002.8300627567 429066.73465548694 473674.76740917354 495812.0750667296 468973.1385539803 456353.83764099027 452437.7819975485 468379.64501115883 446974.74306903215 490902.115929789 0.9350190499655645 0.8740372484294893 0.9649067543985094 1.0100019107223461 0.9553292262057694 0.9296228776212079 0.9216456138931333 0.9541202407001818 0.9105170431429969 1.0 18.905075859586148 -4.775939077499606 24.995157290749194 0.9538982496739258 0.9045281408610665 0.27930807628211396 0.032813298843569226 279.1442613989606 481201.52490552684 0.008878411742757934 0.018614474990330598 1.6751778522229545e-05 4.775939077499606 -0.049370108812859304 DKDS(ph)GSSSPLPK ddPTM_KYSE-520_SHP099_60min_R1 3 DKDSGSSSPLPK 12 1 Q86VQ1;H7C0B2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 DKDS(0.505)GS(0.291)S(0.13)S(0.075)PLPK;DKDS(0.387)GS(0.113)S(0.113)S(0.387)PLPK;DKDS(0.47)GS(0.177)S(0.177)S(0.177)PLPK 140.45 0.00035319 2239210000.0 8577080.0 7081290.0 7546520.0 7530480.0 7868300.0 7869220.0 7535320.0 7942430.0 9172500.0 7673500.0 True False 8101292.274414921 6741094.199167013 8032980.7540589105 8246174.555078635 8487490.445497006 7820105.279041045 8297063.68323623 7914879.564107102 7507005.21990825 7605518.759892666 1.0651860221733582 0.8863424589412423 1.056204186415323 1.0842356472203365 1.1159646979316356 1.0282145802177218 1.090926726391156 1.0406758321136274 0.9870470978910837 1.0 22.85861522447973 -4.899690009478478 24.990028176237683 1.0560830225574371 0.9746349579245752 0.22096302245872268 0.05523854215762684 14.87878521977279 3688.9508311700492 0.013829530404646078 0.028788466697360737 1.2598243277886612e-05 4.899690009478478 -0.08144806463286192 DKDSGS(ph)SSPLPK ddPTM_KYSE-520_SHP099_60min_R1 1 DKDSGSSSPLPK 12 1 Q86VQ1;H7C0B2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 DKDS(0.179)GS(0.36)S(0.23)S(0.23)PLPK 68.44 0.040961000000000004 4147500000.0 2825300.0 2579200.0 2571800.0 2520100.0 2698100.0 2706500.0 2531000.0 2787100.0 3133400.0 2879100.0 True False 2668574.976904084 2455291.360541871 2737582.3430254925 2759609.546304306 2910425.119910972 2689607.7295747995 2786858.1801795983 2777432.200614032 2564453.5465860437 2853593.4139059065 0.9351629997110993 0.860420881467184 0.9593456200469632 0.9670647306853157 1.019915838650355 0.9425336197049009 0.9766136151698769 0.9733104187440538 0.898675170081747 1.0 21.444348360504975 -4.873102329679969 7.12490983557595 0.9681464002984659 0.8982790885479709 0.39083192358174934 0.034768091037981154 0.19803601772892912 11.523621475654936 0.008818566905341291 0.018607379228322216 1.3393610662447862e-05 4.873102329679969 -0.06986731175049499 DKDSGSS(ph)SPLPK ddPTM_KYSE-520_SHP099_60min_R1 3 DKDSGSSSPLPK 12 1 Q86VQ1;H7C0B2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 DKDS(0.335)GS(0.061)S(0.479)S(0.125)PLPK;DKDS(0.009)GS(0.002)S(0.494)S(0.494)PLPK;DKDS(0.011)GS(0.003)S(0.739)S(0.247)PLPK 191.52 1.2178e-07 5994900000.0 8791800.0 7594800.0 6904800.0 6920300.0 7106700.0 7010700.0 7272900.0 7221400.0 8336100.0 6999200.0 True False 8304101.327981204 7229934.40797278 7349894.456070609 7578003.231335935 7665956.858408236 6966943.62081288 8008115.708663839 7196350.648887439 6822474.375980069 6937192.533295196 1.1970406310802968 1.0421988972156335 1.059491202066923 1.0923732035640001 1.1050517657705652 1.0042886351178655 1.1543741463464832 1.0373577804491383 0.9834633164980596 1.0 22.725920494698396 -1.0000000000976519 0.09268516703104164 0.9446984199547797 1.445798294037077 0.333956321088422 0.05387817468966654 200.3761936015195 1.333208632120073 0.9080640529168712 12.760264678030111 0.09999999997751483 1.0000000000976519 0.5010998740822974 DKDSGSSS(ph)PLPK ddPTM_KYSE-520_SHP099_60min_R1 4 DKDSGSSSPLPK 12 1 Q86VQ1;H7C0B2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 DKDS(0.005)GS(0.025)S(0.2)S(0.77)PLPK;DKDS(0.06)GS(0.031)S(0.242)S(0.667)PLPK;DKDS(0.006)GS(0.014)S(0.085)S(0.895)PLPK;DKDS(0.005)GS(0.002)S(0.085)S(0.908)PLPK 166.86 4.2793e-06 13064700000.0 20836220.0 17281990.0 16869680.0 16984970.0 17518610.0 18302800.0 16981320.0 17534640.0 21082340.0 18090390.0 True False 19680393.34062521 16451737.259604137 17957126.56524235 18599216.442082584 18897224.939744066 18188565.43612104 18697957.547312293 17473816.426455755 17254318.498542458 17930123.218710452 1.0976161792401022 0.9175473619967325 1.001506032401591 1.037316710834085 1.0539372601759047 1.0144138561825886 1.0428237061862793 0.974550827861655 0.9623089751294749 1.0 24.09588206688585 -7.281148962106213 23.144586522279095 0.976322400882676 1.0200078661550935 0.17190137243124815 0.04430160572393075 609.4939625596946 715709.4802977467 0.024069883166462483 0.0115942687422938 5.23420873519014e-08 7.281148962106213 0.04368546527241757 DKDTDKFK ddPTM_KYSE-520_SHP099_60min_R1 3 DKDTDKFK 8 2 Q15056-2;Q15056 Q15056-2 EIF4H Eukaryotic translation initiation factor 4H 0 ;; 114.4 0.0006825000000000001 33089020000.0 48679250.0 49008480.0 33976960.0 28939200.0 45216010.0 49195200.0 33515950.0 45899260.0 42760860.0 38206410.0 False True 45978914.962820925 46654039.05757183 36167169.2066581 31689572.867112253 48774252.74309532 48888154.508767135 36904069.31015024 45740046.18002779 34996565.73755966 37867930.93153723 1.214191370686395 1.2320197568206013 0.9550870173510668 0.8368445829376036 1.2880094460739355 1.2910173148132587 0.9745467577003457 1.2078834268162904 0.9241742254371168 1.0 25.174473260074514 -13.999999991299985 0.10141835517783102 0.6267587016877901 1.180982699963273 0.06610179954496664 0.1559043243795492 692.1325242289639 4.752643152426968 53.158051145410575 2.690990478135737 1.0000000200325249e-14 13.999999991299985 0.554223998275483 DKDVT(ph)LSPVK ddPTM_KYSE-520_SHP099_60min_R1 1 DKDVTLSPVK 10 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 DKDVT(0.982)LS(0.018)PVK 183.89 1.4242999999999999e-05 3391700000.0 2016800.0 1626600.0 1609300.0 1673800.0 1641800.0 1451900.0 1448100.0 1642400.0 1826000.0 1510700.0 True False 1904924.083608875 1548455.6944236222 1713038.0529710387 1832877.4487536813 1771000.3194358367 1442838.1535450418 1594488.0800940637 1636702.897739041 1494444.4297140872 1497316.3733068139 1.2722255079611946 1.0341539851086163 1.1440722104626457 1.2241083323665143 1.182782978272383 0.9636160929426977 1.064897244509954 1.0930908970990498 0.998081939365704 1.0 20.51394765510062 -6.247252797611645 24.842860430389845 1.032315415734931 1.1652424282313183 0.547389713673708 0.06673953667903373 645.4532687574665 1130287.1456124363 0.022214036727665303 0.022110386811474134 5.65909783845929e-07 6.247252797611645 0.13292701249638728 DKDVTLS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 5 DKDVTLSPVK 10 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 DKDVT(0.005)LS(0.995)PVK;DKDVTLS(1)PVK;DKDVT(0.001)LS(0.999)PVK;DKDVTLS(1)PVK;DKDVTLS(1)PVK 149.57 0.00025253 35535020000.0 34836630.0 29094840.0 29634170.0 27357420.0 28858420.0 28499700.0 30381640.0 30723190.0 35278700.0 32591670.0 True False 32904172.68879982 27697080.214154836 31544436.014548477 29957460.971491728 31129413.47205109 28321822.80087306 33452912.66743252 30616618.424736448 28872977.38365518 32302933.15973556 1.0186125367034373 0.85741688153193 0.9765192485327455 0.9273913555575387 0.9636714201189872 0.8767570010074252 1.0355998479150608 0.9477968540299293 0.8938190609775432 1.0 24.945161834173405 -6.746746728687848 24.999973614715326 0.9649537151321729 0.9357320358307238 0.07462785249343917 0.055288239369643194 737.6742917866404 1255174.3719659334 0.020236963310250437 0.015605215765152393 1.7916504018645778e-07 6.746746728687848 -0.029221679301449033 DKEDPQEMPHS(ph)PLGSMPEIR ddPTM_KYSE-520_SHP099_60min_R1 13 DKEDPQEMPHSPLGSMPEIR 20 1 G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58-7;Q9HB58;Q9HB58-6 G5E9C0 SP110 Sp110 nuclear body protein 1 DKEDPQEMPHS(0.986)PLGS(0.014)MPEIR;DKEDPQEMPHS(0.912)PLGS(0.088)MPEIR;DKEDPQEMPHS(0.958)PLGS(0.042)MPEIR;DKEDPQEMPHS(0.998)PLGS(0.002)MPEIR;DKEDPQEMPHS(1)PLGSMPEIR;DKEDPQEMPHS(1)PLGSMPEIR;DKEDPQEMPHS(1)PLGSMPEIR;DKEDPQEMPHS(1)PLGSMPEIR;DKEDPQEMPHS(0.972)PLGS(0.028)MPEIR;DKEDPQEMPHS(1)PLGSMPEIR;DKEDPQEMPHS(1)PLGSMPEIR;DKEDPQEMPHS(1)PLGSMPEIR;DKEDPQEMPHS(1)PLGSMPEIR 267.83 1.3248e-35 23375320000.0 7659170.0 7151040.0 6891090.0 8094690.0 7507750.0 6977120.0 6837960.0 7706140.0 8860570.0 6965790.0 True False 7234300.571923142 6807493.304470121 7335300.687533838 8864006.903842708 8098567.211745883 6933573.206048748 7529207.728858505 7679409.1989666065 7251713.844792861 6904078.519902612 1.0478299965836988 0.9860104117944108 1.062459047414963 1.2838797934134363 1.1730120375079571 1.004272067019677 1.0905449159006249 1.1123003854647544 1.0503521684882506 1.0 22.71901744166693 -9.722189377726774 13.850745923820963 1.00000988173969 1.0924841508611514 0.09724251376268211 0.0820378629145809 0.0 0.0 0.08656817665493635 0.02099586683326068 1.8958790270936102e-10 9.722189377726774 0.09247426912146128 DKEDQWIR ddPTM_KYSE-520_SHP099_60min_R1 4 DKEDQWIR 8 1 A0A0G2JQN5;Q9BV57-2;Q9BV57 A0A0G2JQN5 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 0 ;;; 123.21 0.00099321 4524890000.0 8111700.0 6223940.0 4338420.0 4353410.0 7404510.0 6689740.0 5226950.0 5914460.0 5375100.0 5643980.0 False True 7661727.830726951 5924932.580075592 4618081.494917437 4767156.777499561 7987202.811101125 6647986.851226939 5755341.116116065 5893944.118705337 4399117.3352443585 5593978.728149992 1.369638356358354 1.0591625152702449 0.8255450582388435 0.8521942983998667 1.42782144860651 1.1884183287599883 1.028845727845561 1.0536229051150767 0.7864022280076151 1.0 22.41544333710845 -7.610070867121551 6.213510341169247 0.8950109772977256 1.0963400247653696 0.1654553240642379 0.18839033835779798 0.4238564610955042 24.127508764045533 0.13977892420725277 0.051198653351635204 2.454308394909186e-08 7.610070867121551 0.20132904746764402 DKEDTQVDSEARPMKDETFGEYS(ph)DNEEK ddPTM_KYSE-520_SHP099_60min_R1 2 DKEDTQVDSEARPMKDETFGEYSDNEEK 28 3 P32004-3;P32004-2;H3BLW5 P32004-3 L1CAM Neural cell adhesion molecule L1 1 DKEDT(0.001)QVDS(0.011)EARPMKDET(0.23)FGEY(0.001)S(0.757)DNEEK;DKEDTQVDSEARPMKDET(0.072)FGEYS(0.928)DNEEK 96.15799999999999 0.004710499999999999 1789350000.0 690720.0 729450.0 624890.0 1034490.0 915290.0 798370.0 720350.0 940340.0 1311730.0 639890.0 True False 652404.3846838167 694406.1270732282 665171.4092593504 1132807.6185692397 987318.1157122818 793387.076689685 793170.0079385112 937078.1800170067 1073552.8980223776 634221.0724268869 1.028670306061182 1.0948960185382037 1.0488005494898334 1.7861399878034327 1.5567412667861174 1.250962970457193 1.2506207100678572 1.4775260879163443 1.6927108617100342 1.0 19.27462628719978 -5.213635701607922 24.752243971899688 1.440831603411418 1.0611993014256047 0.38482794755414396 0.2159566503480771 374.34042710990224 193828.8363552367 0.058952227228177 0.10210792854415257 6.114547152105956e-06 5.213635701607922 -0.3796323019858132 DKEEIFGS(ph)DADS(ph)EDDADS(ph)DDEDR ddPTM_KYSE-520_SHP099_60min_R1 1 DKEEIFGSDADSEDDADSDDEDR 23 1 Q8N7H5 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog 3 DKEEIFGS(1)DADS(1)EDDADS(1)DDEDR 125.02 3.4238e-08 0.0 128030.0 93110.0 101330.0 96551.0 96157.0 109170.0 94981.0 105320.0 126640.0 104240.0 True False 120927.92067852251 88636.85583904077 107861.89393373231 105727.1780108834 103724.00884151028 108488.62953544453 104582.60640523056 104954.6695018727 103645.36833460684 103316.51469749278 1.170460705460258 0.8579156594525711 1.0439947016171447 1.0233327974762696 1.0039441336674066 1.050060872195462 1.012254494951217 1.015855691698238 1.0031829726164974 1.0 16.65671135562776 -4.207452439721428 23.393372625536067 1.0056583411480438 1.1704630130713138 0.49845948017400943 0.05076428638147507 26383.887990645017 11431742.669083385 0.012110945542347784 15.912457566902187 6.20222561492729e-05 4.207452439721428 0.16480467192327009 DKEGDRAS(ph)EEGK ddPTM_KYSE-520_SHP099_60min_R1 1 DKEGDRASEEGK 12 2 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DKEGDRAS(1)EEGK 67.646 0.03047 0.0 159500.0 121730.0 108270.0 155350.0 141480.0 148920.0 137170.0 155190.0 172600.0 192420.0 True False 150652.217044633 115881.90807954477 115249.2574381249 170114.4172923194 152613.67108891593 147990.53504093076 151036.48225019188 154651.68211161834 141260.19089192315 190715.3085004945 0.7899324822382697 0.6076172331978494 0.6042999817071637 0.891980925023008 0.8002172048423697 0.7759761720467607 0.791947345169726 0.8109033476524374 0.740686167264632 1.0 17.541061126222427 -13.999999999590862 0.09790219281511835 1.7507559977244291 0.5892499385982766 0.46219560805523874 0.0818843877192846 180.60168120692805 1.2063873625103012 28.02610379667618 1.5670110922764309 1.0000000009420741e-14 13.999999999590862 -1.1615060591261526 DKEGT(ph)PPLTK ddPTM_KYSE-520_SHP099_60min_R1 2 DKEGTPPLTK 10 1 Q03164-2;Q03164;Q03164-3;E9PR05 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 DKEGT(0.999)PPLT(0.001)K;DKEGT(0.999)PPLT(0.001)K 100.69 0.0065768 1920910000.0 4818800.0 3795100.0 3785300.0 3112700.0 3366900.0 3765700.0 3509400.0 4353600.0 4546200.0 3977400.0 True False 4551491.557960358 3612777.6994387675 4029306.494694145 3408530.072132616 3631855.874959503 3742196.8694845135 3864164.4004434166 4338498.377737881 3720724.6803757884 3942163.3303703754 1.154566966542387 0.9164454632323259 1.0221054170060433 0.8646344117386878 0.9212849825322386 0.9492749426830384 0.9802141810497662 1.1005374496571831 0.9438281391619098 1.0 21.910556120194133 -9.044461779214945 10.747702763303808 1.0000141373667144 0.9797991973149935 0.0015250903719883357 0.0835689364007178 0.0 0.0 0.07999749294911539 0.019402241953753344 9.026891465869339e-10 9.044461779214945 -0.020214940051720864 DKEIS(ph)PLVAITPFDFK ddPTM_KYSE-520_SHP099_60min_R1 2 DKEISPLVAITPFDFK 16 1 Q9Y450-2 Q9Y450-2 HBS1L HBS1-like protein 1 DKEIS(1)PLVAITPFDFK;DKEIS(1)PLVAITPFDFK 172.61 2.0294e-08 714990000.0 3611200.0 3293400.0 3173700.0 2997500.0 3251700.0 3478100.0 3055100.0 3285000.0 4338700.0 3800200.0 True False 3410879.5372512746 3135180.1205058154 3378281.7800995423 3282381.498768761 3507590.2903578468 3456391.887764315 3363939.3229026804 3273605.1017247625 3550901.449726456 3766533.184510865 0.9055753315217966 0.832378202161774 0.896920753012895 0.87145959904639 0.9312516626116901 0.9176586846434951 0.8931128860715277 0.8691294995585932 0.9427506079938038 1.0 21.84480580937248 -13.999999999322673 0.15772652680661992 1.3986952670426707 0.8637694581998578 0.5871271995981133 0.02814164532623483 95.28094351062502 0.8692868346403289 11.83228968461331 0.12603884763679057 1.0000000015596021e-14 13.999999999322673 -0.5349258088428128 DKEIS(ph)PSVTK ddPTM_KYSE-520_SHP099_60min_R1 5 DKEISPSVTK 10 1 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 DKEIS(0.744)PS(0.244)VT(0.012)K;DKEIS(0.976)PS(0.024)VTK;DKEIS(0.838)PS(0.162)VTK;DKEIS(0.944)PS(0.056)VTK;DKEIS(0.605)PS(0.394)VT(0.001)K 190.34 5.0388e-06 7267030000.0 8113270.0 7031990.0 6460840.0 7022110.0 7384410.0 7134560.0 7013940.0 7741650.0 8179730.0 7155960.0 True False 7663210.739697222 6694162.645167821 6877316.0841095 7689489.2231256375 7965521.05545448 7090030.56460934 7722977.504657797 7714796.0230647 6694497.226213156 7092563.761652641 1.0804570811375567 0.9438283348767543 0.9696516401153952 1.0841621565251753 1.1230806409554832 0.9996428376073266 1.0888837611039344 1.0877302315949955 0.9438755083751645 1.0 22.75787578460972 -5.256908974555231 24.896113886794982 1.0533942866546249 0.9925639499709477 0.1117206885420775 0.060498908472746964 642.7155393147791 3531927.387142786 0.016312296357714237 0.027082927672605044 5.534661001407463e-06 5.256908974555231 -0.06083033668367721 DKEIS(ph)PSVTKK ddPTM_KYSE-520_SHP099_60min_R1 2 DKEISPSVTKK 11 2 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 DKEIS(0.988)PS(0.009)VT(0.003)KK;DKEIS(0.981)PS(0.018)VTKK 124.78 0.00011994 2390700000.0 3633750.0 3195070.0 3052680.0 2824460.0 3061760.0 2968750.0 2521660.0 2682390.0 3839840.0 2792090.0 True False 3432178.6437989636 3041574.0413021552 3249460.6372606955 3092895.829195135 3302703.0929686124 2950220.9300481 2776574.0018299795 2673085.4151645345 3142621.850489236 2767354.2548131505 1.2402382665065415 1.0990909588145663 1.1742120227683306 1.1176363936116176 1.1934515023598264 1.0660799660603253 1.0033316106894494 0.9659353913635531 1.1356051886105283 1.0 21.40007590750711 -6.433915301729705 4.227541558399342 1.0242414374426803 1.158688118219023 0.5899071294202294 0.05507075543569076 0.1629969900234327 5.1979727990619 0.019391584720932754 0.0166546809978754 3.682007749875597e-07 6.433915301729705 0.1344466807763427 DKEISPS(ph)VTK ddPTM_KYSE-520_SHP099_60min_R1 1 DKEISPSVTK 10 1 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 DKEIS(0.309)PS(0.69)VT(0.001)K 217.91 5.7399e-09 1904100000.0 2642900.0 2135300.0 2043100.0 2144200.0 2376900.0 2256200.0 2252000.0 2242500.0 2362300.0 2027200.0 True False 2496293.0685094683 2032716.9828493565 2174801.495075584 2347984.123322762 2563948.5072889733 2242118.2189051043 2479654.1374019966 2234721.290903436 1933365.8687369074 2009240.5851377328 1.242406253872454 1.011684214366999 1.0823997440438433 1.1685928209347853 1.276078398104434 1.1159033096832491 1.2341250499038756 1.1122218550797622 0.962237117365602 1.0 20.938218891087796 -7.659964820644852 4.481465785910686 0.9818248385291164 1.156680566153717 0.46826319380596737 0.07551347274468537 0.19603548287650227 6.60941436319138 0.059553913852647564 0.020162547414158905 2.1879388473857602e-08 7.659964820644852 0.17485572762460055 DKENALMPNWLHLPVGYHGR ddPTM_KYSE-520_SHP099_60min_R1 1 DKENALMPNWLHLPVGYHGR 20 1 P16930;P16930-2 P16930 FAH Fumarylacetoacetase 0 80.361 0.02027 63139000.0 101620.0 90161.0 80045.0 75599.0 135890.0 94554.0 84213.0 77648.0 69655.0 46634.0 False True 95982.93602555228 85829.53022557992 85204.82877652827 82783.90623033186 146583.7698916651 93963.85341297454 92726.07187967772 77378.65721117942 57007.407859657535 46220.85904070302 2.0766151477415806 1.8569436398833847 1.843428065702872 1.7910507928342632 3.171377013191825 2.032931783682949 2.0061520664949404 1.674106860347148 1.233369717543667 1.0 15.49625645290422 -7.619268769265173 1.6076392977700171 1.0111877234553615 2.1281339375747783 0.5413094036786537 0.37027483481299256 0.3128158536365184 1.4776968547086733 0.3611653899276448 0.11350888969997937 2.4028752865101844e-08 7.619268769265173 1.1169462141194169 DKEQWK ddPTM_KYSE-520_SHP099_60min_R1 4 DKEQWK 6 1 P00338;P00338-3;P00338-5;P00338-2;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 ;;; 89.55 0.01711 10214240000.0 20410620.0 16715760.0 9893020.0 14134860.0 19958110.0 21529060.0 15941820.0 17067540.0 15399390.0 18358910.0 False True 19278402.221037783 15912709.79873273 10530739.898591673 15478232.84459937 21528699.71088779 21394689.15074067 17553374.742769938 17008336.687333778 12603248.96303111 18196264.34041584 1.0594703319526086 0.8745042114709726 0.5787308703359392 0.8506269504021531 1.1831384347978644 1.1757737055523416 0.9646691438627887 0.934715849865758 0.6926283729038797 1.0 24.11713896239719 -4.2482246753692285 22.50479078085528 0.9203755543077892 1.0594706903618951 0.05387262495467138 0.178420595924877 2085.1431535227907 3550761.2099972023 0.04924804080068521 0.7934157310042833 5.6464478920458785e-05 4.2482246753692285 0.13909513605410595 DKESDKEDGRES(ph)PSYDTPSQR ddPTM_KYSE-520_SHP099_60min_R1 5 DKESDKEDGRESPSYDTPSQR 21 3 Q9Y6M7-7;Q9Y6M7-13;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7;Q9Y6M7-9;Q9Y6M7-2;Q9Y6M7-8;E9PFN4;Q9Y6M7-11;C9JRP1;A0A0A0MST8;Q9Y6M7-12;Q9Y6M7-10 Q9Y6M7-7 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 DKESDKEDGRES(0.996)PS(0.004)YDTPSQR;DKESDKEDGRES(0.999)PS(0.001)YDTPSQR;DKESDKEDGRES(0.99)PS(0.01)YDT(0.001)PSQR;DKES(0.001)DKEDGRES(0.951)PS(0.047)Y(0.001)DTPSQR;DKESDKEDGRES(0.998)PS(0.002)YDTPSQR 180.09 1.0016e-09 8151560000.0 4468880.0 5428460.0 4428620.0 6587890.0 6147120.0 5615790.0 5657940.0 7593320.0 8428800.0 4231330.0 True False 4220982.317908584 5167668.633315423 4714095.931242531 7214001.084878649 6630863.371671585 5580739.7715384755 6229899.7913731085 7566980.545214214 6898342.392756903 4193843.7081249296 1.0064710589312325 1.2322034374585435 1.1240514094766318 1.7201406602021498 1.581094535980276 1.3306980803139248 1.4854868767054032 1.804306758154661 1.6448735033669521 1.0 21.999841666878243 -5.2446807842284695 23.870378404214623 1.5375578054251176 1.1320380008013693 0.39424541251610146 0.21868660925831632 440.75424293209926 627792.9643057004 0.05797510919093959 0.10000872489490191 5.6927120366617426e-06 5.2446807842284695 -0.40551980462374826 DKETGTDGILAGSQEHDPGQGSS(ph)SPEQAGSPTEGEGVSTWESFKR ddPTM_KYSE-520_SHP099_60min_R1 1 DKETGTDGILAGSQEHDPGQGSSSPEQAGSPTEGEGVSTWESFKR 45 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 DKETGTDGILAGSQEHDPGQGS(0.021)S(0.488)S(0.488)PEQAGS(0.004)PTEGEGVSTWESFKR 157.4 6.0969e-10 754980000.0 163580.0 168810.0 153950.0 246120.0 153610.0 151360.0 150280.0 172180.0 201640.0 174010.0 True False 154505.89131135453 160700.11421102422 163873.8633287091 269511.17080132366 165698.2330786567 150415.3060958588 165471.76899146196 171582.747767114 165027.25893074967 172468.40677773155 0.8958504006503278 0.9317655170209017 0.9501674329252738 1.5626698004386153 0.9607454267969211 0.8721325192602164 0.9594323510201698 0.9948648043594503 0.9568550090650999 1.0 17.395972583808696 -5.953318804044302 24.999802217587582 0.9520526626255346 1.0891687851645466 0.10984009214859214 0.1778395216034225 291.217759770838 155958.32524961935 0.05845278961462842 0.06627921588985243 1.113476859723341e-06 5.953318804044302 0.13711612253901206 DKEVS(ph)DDEAEEK ddPTM_KYSE-520_SHP099_60min_R1 14 DKEVSDDEAEEK 12 1 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK;DKEVS(1)DDEAEEK 258.61 2.7206e-21 66023010000.0 52802400.0 41194930.0 36619140.0 44740710.0 43683150.0 41976760.0 49600310.0 49323580.0 44726130.0 40834190.0 True False 49873345.61302523 39215863.72794948 38979668.3570956 48992853.6266151 47120765.381875664 41714767.470351495 54614393.38717662 49152488.01319012 36604992.24598475 40472430.84511913 1.2322794695451267 0.9689525167890627 0.9631165596715435 1.21052411737022 1.1642682289630326 1.0306958736920588 1.3494221188783122 1.214468392108397 0.9044426411170016 1.0 25.270436166613464 -3.9166215814371177 16.925544298418185 1.1044526173852576 4.527561211688117 0.08251634740542368 0.1347713447511685 218.08705667720236 45714.11620072155 0.03333430662443245 912.7712129952843 0.00012116534369660851 3.9166215814371177 3.4231085943028594 DKEVS(ph)DDEAEEKEDK ddPTM_KYSE-520_SHP099_60min_R1 13 DKEVSDDEAEEKEDK 15 2 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK;DKEVS(1)DDEAEEKEDK 264.72 2.8756999999999998e-25 59376600000.0 34121280.0 25106050.0 23074540.0 26574720.0 26848110.0 25910000.0 38669960.0 29408150.0 27288310.0 24603500.0 True False 32228504.579314675 23899917.673050653 24561961.76896937 29100373.39881912 28960903.51215038 25748286.079173476 42579096.939240575 29306139.991563775 22333440.786315013 24385532.13123335 1.3216240025386172 0.9800859601681312 1.007235012825906 1.193345843027429 1.187626472791087 1.0558837076265681 1.7460802868724212 1.2017839034165687 0.9158479981542011 1.0 24.539522118837322 -5.4265844990092384 7.00595081431267 1.2140470107962713 1.0909397348431447 0.016738434969143623 0.2271989606107539 0.8904698692987332 55.984253715346114 0.0660295107998517 0.09806405101918461 3.744686810147521e-06 5.4265844990092384 -0.12310727595312665 DKEVS(ph)DDEAEEKEDKEEEK ddPTM_KYSE-520_SHP099_60min_R1 14 DKEVSDDEAEEKEDKEEEK 19 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK;DKEVS(1)DDEAEEKEDKEEEK 261.46 1.3705e-32 595045330000.0 76755480.0 57332940.0 56317290.0 65475940.0 62993050.0 63779270.0 73291320.0 70619150.0 63935250.0 53920710.0 True False 72497700.51614405 54578579.503902555 59947592.62424995 71698753.65154082 67950244.65357381 63381199.9182111 80700321.87995273 70374188.65128356 52326220.27649378 53443014.459077604 1.3565421271597058 1.0212481473269903 1.1217105403018206 1.3415926174307027 1.2714523187236133 1.1859585496761857 1.510025635656211 1.3168079937775685 0.9791030840253411 1.0 25.671498049690204 -7.767311606256163 24.99454452408812 0.9895513413863491 1.2609333921731536 0.42678128942665405 0.12790548243829897 156.61093527381198 666565.3672191224 0.11969252655079467 0.03415963975583891 1.7087888192958914e-08 7.767311606256163 0.27138205078680444 DKFNECGHVLYADIK ddPTM_KYSE-520_SHP099_60min_R1 1 DKFNECGHVLYADIK 15 1 A0A087X0X3;P52272-2;P52272 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 120.24 0.00013753 732300000.0 1101700.0 1000600.0 700460.0 721130.0 1186700.0 969100.0 739890.0 838410.0 821610.0 765520.0 False True 1040586.5048154993 952529.6740687797 745612.7723756257 789665.9783843595 1280086.5386006255 963051.4874306066 814685.3018305338 835501.7513963658 672426.3351026234 758738.0883655469 1.37146997201248 1.2554130188991743 0.9827011241544557 1.0407622742196014 1.687125713377792 1.2692805359293167 1.0737371885277394 1.1011728081243175 0.8862430203697116 1.0 19.533242436723288 -6.92773738502925 2.9118582651552836 1.0022717125871556 1.2622674560348421 0.31273862242507666 0.18542155802921859 0.3871819378965706 6.622508567756622 0.09777501642792853 0.059568693275466544 1.1810345834898324e-07 6.92773738502925 0.2599957434476865 DKFS(ph)PFPVQDRPESSLVFK ddPTM_KYSE-520_SHP099_60min_R1 5 DKFSPFPVQDRPESSLVFK 19 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DKFS(1)PFPVQDRPESSLVFK;DKFS(1)PFPVQDRPESSLVFK;DKFS(0.999)PFPVQDRPESS(0.001)LVFK;DKFS(1)PFPVQDRPESSLVFK;DKFS(1)PFPVQDRPESSLVFK 218.86 7.938899999999998e-19 21023620000.0 6534080.0 5769840.0 5615170.0 5421670.0 5785550.0 5783720.0 5711010.0 5486160.0 7113960.0 5496880.0 True False 6171621.557034442 5492648.225693594 5977132.842789653 5936943.886715479 6240839.869723472 5747621.658118 6288334.624886402 5467129.791439373 5822244.192337797 5448181.919707929 1.1327855141381358 1.0081616779030111 1.0970876029613343 1.0897110218070238 1.145490360215071 1.054961405992501 1.1542079022984446 1.003477833892239 1.068658183251326 1.0 22.377343446367004 -7.282850736951274 24.993932827930518 1.027051002921471 1.0939472554664829 0.36244534827343244 0.04440937866483789 986.7250927260563 1151818.0683221691 0.023262264565228327 0.01119009025446035 5.213738717554413e-08 7.282850736951274 0.06689625254501186 DKFSFDLGK ddPTM_KYSE-520_SHP099_60min_R1 3 DKFSFDLGK 9 1 Q02790;F5H1U3 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ;; 129.89 0.00063935 2877400000.0 6446470.0 6212840.0 3628200.0 3496050.0 6430090.0 6656560.0 5086060.0 5422970.0 5386770.0 5643540.0 False True 6088871.458380647 5914365.840737043 3862079.577325252 3828313.5408742367 6936101.500792522 6615013.939914445 5600208.579962161 5404158.982800709 4408668.357421111 5593542.626207676 1.0885536886502276 1.0573559970788815 0.6904532307003575 0.6844166205040197 1.240019423163863 1.1826161668851551 1.0011917230635292 0.9661424510256453 0.7881710486597492 1.0 22.41533086141524 -2.870283653324719 14.987082229458096 0.9699712232758265 1.087475982597956 0.0 0.18288136904993196 0.0 0.0 0.04525479462069957 0.0 0.0013480821141442947 2.870283653324719 0.11750475932212956 DKFYHLAK ddPTM_KYSE-520_SHP099_60min_R1 1 DKFYHLAK 8 1 Q8IY81;J3QRS5;J3QR05;J3KS74;J3QSE2;J3KS36 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 0 56.258 0.049056 624820000.0 996190.0 792680.0 699340.0 578260.0 1012100.0 789320.0 677230.0 764140.0 755910.0 620880.0 False True 940929.3548444678 754598.4629630633 744420.5753835635 633217.6565397922 1091746.5119387317 784393.5610966115 745691.0175278651 761489.3766916174 618655.7989404035 615379.4862373308 1.5290229458210824 1.2262327227983685 1.20969351762965 1.028987268346449 1.774102868807171 1.2746501608181617 1.2117580033213482 1.2374305509396473 1.0053240525177485 1.0 19.231116826465524 -7.5858433937369 1.4487669205026443 0.9852445472425524 1.3266478284814758 0.30226651501399193 0.19196875994460177 0.5501865831699835 2.0969355348172924 0.17932991406373203 0.058018268097946926 2.5951149899262802e-08 7.5858433937369 0.3414032812389234 DKGATKES(ph)SEKDR ddPTM_KYSE-520_SHP099_60min_R1 5 DKGATKESSEKDR 13 3 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BNI3;H3BP82;H3BTR6;H3BUG0;H3BTY0;H3BNU7;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 DKGATKES(0.5)S(0.5)EKDR;DKGAT(0.005)KES(0.977)S(0.018)EKDR;DKGAT(0.001)KES(0.5)S(0.5)EKDR;DKGAT(0.14)KES(0.844)S(0.016)EKDR;DKGAT(0.026)KES(0.487)S(0.487)EKDR 131.48 4.0815e-05 10531700000.0 5212530.0 5381310.0 3153730.0 3288250.0 6019380.0 8508500.0 4137780.0 4199830.0 4998260.0 13343100.0 True False 4923380.569979056 5122783.790089012 3357024.481946408 3600764.2913515847 6493070.960412772 8455395.295432182 4556067.183241225 4185261.7699776874 4090701.979881014 13224890.514774716 0.3722813859576912 0.38735925899468804 0.25384138176387727 0.2722717656776702 0.49097351340328893 0.6393546537104333 0.3445069868934818 0.3164685382689524 0.30931840042916975 1.0 23.656752442925477 -11.114329184410941 2.3887169202378775 2.16597253847567 0.37835010675007374 0.7488456433759083 0.10836074445584819 10459335.333022365 2882353.9695286844 66193483.26087959 0.03172123932547813 7.685476794377887e-12 11.114329184410941 -1.787622431725596 DKGATKESS(ph)EKDR ddPTM_KYSE-520_SHP099_60min_R1 1 DKGATKESSEKDR 13 3 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BNI3;H3BP82;H3BTR6;H3BUG0;H3BTY0;H3BNU7;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 DKGATKES(0.176)S(0.824)EKDR 110.22 0.0002096 2852500000.0 1867700.0 1946700.0 1051700.0 1103200.0 2170000.0 3098400.0 1416800.0 1427100.0 1855000.0 4974600.0 True False 1764094.9578323562 1853177.609943728 1119494.2647794958 1208047.7963108264 2340766.654388942 3079061.736306878 1560023.9706354998 1422149.723187645 1518178.7607445964 4930528.914180236 0.35779020639323433 0.3758577714885671 0.2270535847705552 0.24501383468951424 0.47474960498799235 0.6244891349184617 0.3164009374630904 0.2884375587165775 0.3079139757964513 1.0 22.233310986908158 -10.896577844018694 2.7213824729164027 1.3352893445815806 0.35897418311815305 0.7497775724919136 0.1113434521564285 26137968.032596655 15465123.574781785 56145936.65146811 0.03138146245859696 1.2688846860265144e-11 10.896577844018694 -0.9763151614634276 DKGEYTLVVK ddPTM_KYSE-520_SHP099_60min_R1 2 DKGEYTLVVK 10 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 138.94 0.00027944 2588800000.0 5394400.0 5038600.0 3642300.0 3255000.0 5177400.0 5057400.0 3697300.0 4660300.0 4375400.0 4412700.0 False True 5095161.878530202 4796538.092907211 3877088.485886049 3564354.2213485613 5584831.924623646 5025834.890652725 4071059.166170695 4644134.507022196 3580937.65485817 4373606.911028655 1.1649793825051005 1.0967007759229748 0.8864739252422146 0.8149690390237286 1.2769396148841632 1.1491281664978592 0.9308242027661324 1.0618545748387602 0.8187607454680804 1.0 22.060392129674987 -7.7404126027304025 24.858215517213242 0.9093803128114749 1.0433548498451786 0.13847537017608813 0.13769135878476946 419.8446648521918 496351.02096275426 0.098053633984444 0.036975778815612446 1.8179728675102124e-08 7.7404126027304025 0.13397453703370366 DKGFGFIR ddPTM_KYSE-520_SHP099_60min_R1 2 DKGFGFIR 8 1 Q15233-2;Q15233;H7C367;C9JYS8;C9IZL7 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 0 ; 133.57 0.00083261 1664150000.0 4759400.0 3931100.0 2652200.0 2365700.0 3779300.0 3414100.0 2670900.0 2555700.0 2974000.0 2870700.0 False True 4495386.5943713235 3742244.0552986055 2823165.055670036 2590535.416726357 4076709.4087244803 3392791.3355039116 2940900.6374720223 2546834.8732048622 2433996.5684390455 2845267.8313708026 1.5799519977722172 1.315251947123605 0.9922317416107299 0.9104715514526026 1.4328033950886057 1.1924330279548134 1.033611178900914 0.8951125251283777 0.8554542885568654 1.0 21.440133032331808 -4.505910305588769 2.9300005530801854 1.0505055174121287 1.5715787549431928 0.5357200609441555 0.1605827089119063 0.24380643800116888 3.8607413493169576 0.046399988891330464 0.2263103676846023 3.119533791806723e-05 4.505910305588769 0.521073237531064 DKGQS(ph)FNDKR ddPTM_KYSE-520_SHP099_60min_R1 5 DKGQSFNDKR 10 2 A0A590UJ08;Q12959-4;Q12959-2;A0A590UJ25;A0A590UJL2;A0A590UJC5 A0A590UJ08 DLG1 Disks large homolog 1 1 DKGQS(1)FNDKR;DKGQS(1)FNDKR;DKGQS(1)FNDKR;DKGQS(1)FNDKR;DKGQS(1)FNDKR 136.83 0.00017024 10191300000.0 9104500.0 9592200.0 9186500.0 10063900.0 10050200.0 7718430.0 9148900.0 9715900.0 10674500.0 9322300.0 True False 8599455.235629208 9131376.31381426 9778676.488919707 11020370.030178124 10841093.562184205 7670256.415363769 10073760.096659467 9682197.810608111 8736279.882246997 9239711.674639659 0.9307060153437721 0.9882750279835303 1.0583313455288168 1.192717956819568 1.1733151362222565 0.8301402343989162 1.0902677974583372 1.0478896043025834 0.9455143396114365 1.0 23.13941640234456 -7.750096504820073 24.63248372725087 0.9727571711002629 1.042265904905476 0.06228174929708852 0.10210088103202479 496.4432574256007 1078107.3858730863 0.07392952996019589 0.027378100472027368 1.7778843014754734e-08 7.750096504820073 0.06950873380521316 DKGS(ph)FNDKR ddPTM_KYSE-520_SHP099_60min_R1 7 DKGSFNDKR 9 2 A0A0C4DFT3;A0A590UJD9;A0A590UK70;A0A590UK02 A0A0C4DFT3 DLG1 1 DKGS(1)FNDKR;DKGS(1)FNDKR;DKGS(1)FNDKR;DKGS(1)FNDKR;DKGS(1)FNDKR;DKGS(1)FNDKR;DKGS(1)FNDKR 82.85 0.0057276 14191050000.0 9316130.0 9371910.0 8744120.0 8902420.0 9432120.0 8051910.0 8621950.0 8990690.0 10243270.0 8854540.0 True False 8799345.69765527 8921669.376076294 9307779.966286678 9748503.320189832 10174374.18257836 8001655.042985632 9493540.848123072 8959503.394832822 8383350.3798233485 8776095.664327873 1.0026492456573715 1.0165875256282966 1.0605832390957106 1.1108018523333214 1.159328085259378 0.9117556769019618 1.0817499274434066 1.0208985564332946 0.955248290409947 1.0 23.06514782133 -6.262251636817396 24.999995013374544 1.0007253692466223 1.0687679112137694 0.2944379059537826 0.05838295762146179 117.3887684356906 3612977.237605976 0.021026019868959585 0.01961964280089991 5.466991053437632e-07 6.262251636817396 0.0680425419671471 DKHIEEVR ddPTM_KYSE-520_SHP099_60min_R1 8 DKHIEEVR 8 1 P16949 P16949 STMN1 Stathmin 0 ;;;;;;; 152.97 0.00035462 17921980000.0 24800110.0 20795310.0 15835200.0 14893130.0 23630150.0 21530470.0 17934530.0 20916120.0 18228040.0 15854440.0 False True 23424398.46050638 19796272.09320332 16855962.329215836 16308568.597417207 25489708.367838174 21396090.35040767 19747527.316545404 20843566.861579083 14918287.427494854 15713981.996167658 1.490672349390444 1.2597871181239266 1.0726728803257306 1.0378380604861681 1.6221037019168427 1.3615957021985752 1.256685117837188 1.3264344369659093 0.9493639124146344 1.0 23.905545476809408 -7.761941277485949 24.999992878510323 0.9746818031107003 1.296468374276073 0.3898639986530259 0.16434032187541495 14.71225595541968 732484.5337206896 0.13852172891903117 0.044098102777121964 1.730050269700829e-08 7.761941277485949 0.3217865711653727 DKHIEEVRK ddPTM_KYSE-520_SHP099_60min_R1 10 DKHIEEVRK 9 2 P16949 P16949 STMN1 Stathmin 0 ;;;;;;;;; 133.81 0.00054902 104069600000.0 60680550.0 59981560.0 46979870.0 42014700.0 59459750.0 60690370.0 44369950.0 52206170.0 56860530.0 35348720.0 False True 57314478.92782258 57099955.82344289 50008267.59064968 46007764.45581983 64138894.04530084 60311578.888880305 48855297.55498212 52025078.98128168 46536091.089315906 35035557.841688044 1.6358945727881442 1.6297715618359843 1.4273575382078243 1.3131734526309211 1.8306799719050961 1.7214390922903153 1.39444897026444 1.484922238611488 1.3282531792299201 1.0 25.062316531444328 -8.097399183184605 1.03315410143587 1.0015678677808302 1.5738015864190984 0.595687300147954 0.14489431728765695 0.4870594348988174 1.1348029147899223 0.1483623444185561 0.0486121812735451 7.990994225154531e-09 8.097399183184605 0.5722337186382682 DKHKEEDKNS(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 1 DKHKEEDKNSER 12 3 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 DKHKEEDKNS(1)ER 68.48100000000001 0.016347999999999998 264490000.0 163470.0 132920.0 81945.0 62823.0 214870.0 325490.0 137710.0 64925.0 113630.0 229670.0 True False 154401.99323063405 126534.32368301242 87227.30581663568 68793.67903157628 231779.04655693614 323458.496175615 151631.07072008375 64699.79032860889 92997.65637919596 227635.30248055616 0.6782866785077089 0.5558642368040456 0.3831888326024754 0.30221006268328 1.0182034334359624 1.4209504969170752 0.6661140388496445 0.2842256434901407 0.4085379348712378 1.0 17.79636478763565 -5.755352604508896 24.999836828793427 0.788269243167313 0.4784073407496697 0.19699371936503296 0.31578894342330943 299.9332160851886 1231889.9940394072 0.10741921346793974 0.13509840792411465 1.7564969317026194e-06 5.755352604508896 -0.3098619024176433 DKHKEEDKNSER ddPTM_KYSE-520_SHP099_60min_R1 11 DKHKEEDKNSER 12 3 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 0 ;;;;;;;;;; 203.7 1.8173e-08 80760813000.0 11183740.0 11084099.0 3404949.0 3101972.0 7654826.0 17253810.0 4727717.0 5828539.0 5756802.0 7746529.0 False True 10563355.647967028 10551602.246468212 3624437.4606510247 3396782.4862381085 8257217.256197916 17146122.571814124 5205640.772431505 5808321.158600226 4711511.873968739 7677900.779768372 1.3758129925046654 1.3742821832592809 0.47206099227038556 0.44241031287989413 1.0754524567387052 2.2331784511978796 0.6780031315523916 0.7564985958017879 0.6136458400691753 1.0 22.87228048592203 -4.619298864754573 24.99999197197051 0.9281797154497707 1.37562383007122 0.12721197320687827 0.4863002974544875 29.398696021014562 7589.678894051134 0.13409499841819406 0.3547820368773618 2.4027087792089407e-05 4.619298864754573 0.4474441146214493 DKIIVNDR ddPTM_KYSE-520_SHP099_60min_R1 2 DKIIVNDR 8 1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog 0 ; 111.06 0.0011815 943020000.0 1770690.0 1736080.0 1246590.0 1055310.0 1503260.0 1588960.0 1185600.0 1374300.0 1370880.0 1488010.0 False True 1672466.2959169983 1652676.1108907915 1326947.1860145202 1155606.3451094797 1621558.009620608 1579042.711245214 1305452.0183409436 1369532.8740640315 1121962.7490725347 1474827.389054262 1.1340081614496411 1.1205895165471367 0.8997305012523733 0.7835536237569578 1.0994900295826737 1.0706627249835525 0.8851558006242812 0.9286055332497242 0.760741736558064 1.0 20.49211468344099 -6.779747511953517 24.27388172806603 0.8876761393790076 1.0103394179396314 0.21581909760680684 0.11537437984980607 312.81324975902135 414739.0123474186 0.0517194195603047 0.03495070055165081 1.6605520306498602e-07 6.779747511953517 0.12266327856062387 DKKDEEEDMS(ph)LD ddPTM_KYSE-520_SHP099_60min_R1 3 DKKDEEEDMSLD 12 2 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 DKKDEEEDMS(1)LD;DKKDEEEDMS(1)LD;DKKDEEEDMS(1)LD 91.20700000000001 0.0019817 1623920000.0 2287970.0 1979680.0 1761870.0 1891290.0 1952360.0 1975000.0 1942680.0 2018920.0 2308870.0 1878190.0 True False 2161051.7431448814 1884573.201239741 1875442.9592916702 2071037.632962929 2105999.6245911475 1962673.2924109502 2139065.0531297107 2011916.83773947 1889637.409876215 1861550.6978097064 1.160887933746616 1.0123673792269652 1.0074627360395338 1.1125335643019039 1.131314676022017 1.0543216978835033 1.149076979556091 1.0807746681874868 1.0150878040010167 1.0 20.828073476667328 -10.599787338813819 3.49138257697117 0.9967961027397537 1.0799804123023329 0.1637702018487558 0.05451207540776403 0.0014258885499960233 0.0001634475119311556 0.05535851532439601 0.012917387892072533 2.513116729332745e-11 10.599787338813819 0.08318430956257916 DKKS(ph)PLIESTANMDNNQSQK ddPTM_KYSE-520_SHP099_60min_R1 7 DKKSPLIESTANMDNNQSQK 20 2 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 DKKS(0.745)PLIES(0.186)T(0.069)ANMDNNQSQK;DKKS(0.999)PLIESTANMDNNQSQK;DKKS(0.878)PLIES(0.061)T(0.061)ANMDNNQSQK;DKKS(0.998)PLIES(0.001)T(0.001)ANMDNNQSQK;DKKS(0.333)PLIES(0.333)T(0.333)ANMDNNQSQK;DKKS(0.997)PLIES(0.002)T(0.001)ANMDNNQSQK;DKKS(0.981)PLIES(0.009)T(0.009)ANMDNNQSQK 294.77 3.8676e-44 11466090000.0 6096590.0 5576590.0 5616670.0 5242990.0 5468460.0 5224960.0 4985950.0 5106030.0 6515900.0 5587820.0 True False 5758399.999449144 5308682.245767754 5978729.535189744 5741282.193237572 5898796.690718775 5192349.086539494 5489978.484182722 5088318.373686362 5332776.81247208 5538316.262058183 1.0397383838295238 0.9585372150262341 1.0795211490807664 1.0366475877460928 1.0650884513638497 0.9375320658574817 0.9912721167249671 0.9187482499952812 0.9628877370196047 1.0 22.401016009572032 -6.265950616071126 24.998620117365075 0.9588338033666579 1.0340724623405169 0.49921414538592446 0.036872529601020027 328.1686054496599 1818510.0191903964 0.012656545924351772 0.011562257532724926 5.420625252056388e-07 6.265950616071126 0.07523865897385895 DKLCS(ph)PLSEPGDPSK ddPTM_KYSE-520_SHP099_60min_R1 5 DKLCSPLSEPGDPSK 15 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 DKLCS(0.989)PLS(0.011)EPGDPSK;DKLCS(0.926)PLS(0.074)EPGDPSK;DKLCS(0.825)PLS(0.175)EPGDPSK;DKLCS(0.988)PLS(0.012)EPGDPSK;DKLCS(0.914)PLS(0.086)EPGDPSK 139.44 8.0115e-06 5707550000.0 10607750.0 9373990.0 9072140.0 8355670.0 9098230.0 10286080.0 9884720.0 10437420.0 11179170.0 10393950.0 True False 10019316.961474622 8923649.449754152 9656944.66033723 9149790.364576211 9814208.939152572 10221880.75929236 10883963.963170638 10401215.026132137 9149314.531942409 10301867.689370742 0.9725728638324825 0.8662166627281956 0.93739746534515 0.8881681109161186 0.9526630738306485 0.9922356865288698 1.056503955530364 1.0096436238318125 0.8881219219484332 1.0 23.296402580447843 -6.047015755663815 3.504055298882623 0.9936132572575379 0.9141452587322281 0.3433194692841347 0.04734043568146342 0.26368790578064594 6.565973626000575 0.016101691156025583 0.016880416653350886 8.973962374904867e-07 6.047015755663815 -0.07946799852530984 DKLEEILR ddPTM_KYSE-520_SHP099_60min_R1 3 DKLEEILR 8 1 O15042-2;O15042;E7ET15;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 0 ;; 127.4 0.0009283 554396000.0 1001208.0 908651.0 674383.0 590347.0 994389.0 914182.0 680762.0 783689.0 757311.0 779480.0 False True 945668.9963813347 864998.0420470423 717854.8072309514 646453.4013857024 1072641.7570005367 908476.2510394049 749580.0665568649 780970.565773388 619802.4126567382 772574.4136262634 1.224049075017396 1.1196307136123838 0.9291723807698052 0.8367522791124007 1.3883992766028002 1.1759077637262845 0.9702367219728789 1.0108677584955412 0.8022559403016557 1.0 19.559314373148577 -6.88783586596476 5.8911196765482154 0.9416206466183623 1.1039556060817286 0.22438984301723008 0.1518184171614938 0.38098831701475294 18.218038358665474 0.06926967458341074 0.046391908974783375 1.294685052665595e-07 6.88783586596476 0.1623349594633663 DKLEETK ddPTM_KYSE-520_SHP099_60min_R1 6 DKLEETK 7 1 P36952;C9JLM5;P36952-2 P36952 SERPINB5 Serpin B5 0 ;;;;; 130.75 0.0022186 9076100000.0 11137800.0 9453200.0 5803060.0 6149020.0 10801800.0 11899700.0 7875070.0 9640300.0 8773700.0 10908900.0 False True 10519964.03134615 8999054.082457516 6177134.5328242835 6733421.012029731 11651840.206165181 11825429.558330402 8671158.928876713 9606860.049362943 7180617.246978363 10812255.632995766 0.9729666397492832 0.8323012688485739 0.5713085911485036 0.6227582144359727 1.0776511952424852 1.0937060646478551 0.8019750201257666 0.8885158079361057 0.6641183385514184 1.0 23.366164191083527 -4.260688147821456 20.668802164418924 0.8347786832522158 0.9729670055787735 0.05034069063353552 0.17343371943850253 21.41480580582885 587642.5128337813 0.04652170152756033 0.2691260300466926 5.486708054501424e-05 4.260688147821456 0.13818832232655764 DKLEPEAPALALPVT(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 1 DKLEPEAPALALPVTPQK 18 1 H3BRE8;Q9BWH6-2;Q9BWH6 H3BRE8 RPAP1 RNA polymerase II-associated protein 1 1 DKLEPEAPALALPVT(1)PQK 100.64 0.0018692000000000001 244980000.0 282240.0 292190.0 209620.0 210320.0 190790.0 295810.0 217750.0 319680.0 335810.0 328240.0 True False 266583.5845685086 278152.7538138688 223132.4406038585 230308.74956498644 205804.08755339443 293963.7400648517 239762.2950352061 318571.10469387297 274835.3690812087 325332.0489668561 0.8194199907912159 0.8549811022221367 0.6858606193655105 0.707919033173549 0.6325970288108971 0.9035806370702811 0.7369771769999592 0.9792183269540964 0.8447841826650413 1.0 18.311553425952162 -7.239782775920828 1.112264877984481 0.9605774779960938 0.7501443717721225 0.4381692015338605 0.08837823469073483 0.49547916711095985 1.0852412624143253 0.07692947243314545 0.030534748046472604 5.7572783110933214e-08 7.239782775920828 -0.21043310622397138 DKLESEMEDAYHEHQANLLR ddPTM_KYSE-520_SHP099_60min_R1 10 DKLESEMEDAYHEHQANLLR 20 1 P23246;P23246-2;H0Y9K7 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ;;;;;;;;; 324.03 2.2489e-53 30276640000.0 14025050.0 11408823.0 8675125.0 9265902.0 12902918.0 11343273.0 10189611.0 10308612.0 9618547.0 8543207.0 False True 13247052.518255986 10860726.018087544 9234337.438190756 10146530.540184975 13918304.239039086 11272475.425633539 11219676.32090005 10272853.831020117 7872061.328638089 8467520.83249446 1.5644546710082927 1.282633516106516 1.0905597542498633 1.198288228739544 1.6437283727282985 1.331260430133806 1.3250249444730129 1.2132067973895755 0.9296772319034314 1.0 23.01350820048553 -7.599280824916674 2.9465572092886596 0.9616960209431648 1.3394282166169713 0.4942869296688345 0.15270951937931532 0.2445399377271335 4.048570040381623 0.13451734945503657 0.04326469647797113 2.5160494655130768e-08 7.599280824916674 0.37773219567380656 DKLNNLVLFDK ddPTM_KYSE-520_SHP099_60min_R1 3 DKLNNLVLFDK 11 1 P62851 P62851 RPS25 40S ribosomal protein S25 0 ;; 151.7 5.5108e-05 3602360000.0 9931440.0 8886400.0 6342780.0 6210830.0 10057760.0 9103460.0 7229020.0 7586590.0 6969820.0 7418200.0 False True 9380523.225365188 8459484.005241657 6751645.747606822 6801105.415845877 10849248.491173703 9046641.929382963 7959799.890036315 7560273.890013412 5704276.382864095 7352480.519272275 1.2758310886750424 1.1505619067017874 0.9182813514309153 0.9250082877498094 1.4755902396117504 1.2304203874692305 1.0826006093007847 1.0282616689968058 0.7758301933493169 1.0 22.8097996259562 -7.403855217868819 2.6055082404330174 0.8915599560542701 1.151341258258865 0.2927030767229264 0.16260777700286855 0.40783677778620236 5.2065300110615675 0.12661563252227853 0.04837033674297754 3.9458882548122754e-08 7.403855217868819 0.25978130220459483 DKLSGEYEK ddPTM_KYSE-520_SHP099_60min_R1 1 DKLSGEYEK 9 1 P34932;A0A087WYC1 P34932 HSPA4 Heat shock 70 kDa protein 4 0 107.85 0.004653899999999999 0.0 227180.0 187950.0 152540.0 153280.0 200720.0 207820.0 152730.0 183480.0 205770.0 175690.0 False True 214577.87252789797 178920.59988129843 162372.97247262942 167847.68511468745 216515.52205942333 206522.91829308498 168169.43890115747 182843.5507045541 168407.35503957712 174133.52328475186 1.2322605577618129 1.0274908386750925 0.9324624541542699 0.9639021938367061 1.2433879357357647 1.1860032140702073 0.9657499356178441 1.05001924532107 0.9671162212929498 1.0 17.40983444434705 -6.794136737216127 24.99944193001364 0.9998896043971305 1.0874439989359046 0.19090476373676735 0.10130802264007446 434.7214198817551 332371.4990418671 0.04659197884325041 0.031414701253276986 1.606435388684601e-07 6.794136737216127 0.08755439453877412 DKMEGS(ph)DFESSGGR ddPTM_KYSE-520_SHP099_60min_R1 2 DKMEGSDFESSGGR 14 1 A0A1B0GW41;Q8WYH8-2;Q8WYH8;E9PEN0 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 DKMEGS(1)DFESSGGR;DKMEGS(0.99)DFES(0.009)S(0.001)GGR 105.39 0.0016661999999999998 0.0 347620.0 303070.0 260710.0 288680.0 306510.0 299500.0 294060.0 304040.0 359000.0 299360.0 True False 328336.8256367102 288510.0622826556 277515.78375074855 316116.06040519313 330630.5931966609 297630.7094061163 323786.4545490367 302985.3562034692 293814.64965353673 296707.903298556 1.106599527638225 0.9723706685101291 0.935316453203824 1.0654116620786744 1.1143302538320692 1.003110150074539 1.0912633298589067 1.0211570127897693 0.9902488150370974 1.0 18.17868383030041 -4.231652920923189 22.679871509115962 1.0253191891602687 1.1065999821897812 0.1904162324699603 0.05211967361516756 5840.192116498599 4446560.5039727 0.013800608372362619 1.214448596279327 5.8660678111907695e-05 4.231652920923189 0.08128079302951252 DKMNS(ph)PGLQTK ddPTM_KYSE-520_SHP099_60min_R1 2 DKMNSPGLQTK 11 1 O14578-4;H7BYJ3;O14578;O14578-3 O14578-4 CIT Citron Rho-interacting kinase 1 DKMNS(1)PGLQTK;DKMNS(1)PGLQTK 168.5 2.2193000000000002e-05 1365750000.0 2283100.0 2134900.0 2120660.0 1949790.0 2253500.0 2406500.0 2288700.0 2394300.0 2930900.0 2219200.0 True False 2156451.891752985 2032336.199449768 2257361.1367759695 2135097.455374263 2430837.6293389318 2391480.140854148 2520064.131559479 2385994.732133823 2398722.44197646 2199539.614511475 0.9804105720696192 0.9239825398194325 1.0262880113106474 0.9707019783994549 1.105157467181526 1.087263955182414 1.1457234572786694 1.0847700656956616 1.090556599276901 1.0 21.06877015427059 -5.759180145256209 24.997888276411103 1.0929086137229311 0.9753156841010636 0.6297602556304949 0.04117717914424292 35.434475816884685 392068.59770405496 0.011932145753444326 0.014670035325448708 1.741084522107017e-06 5.759180145256209 -0.11759292962186751 DKNNKEPIIEDILNLES(ph)SPTASGSSVS(ph)PGLYSK ddPTM_KYSE-520_SHP099_60min_R1 1 DKNNKEPIIEDILNLESSPTASGSSVSPGLYSK 33 2 Q9BQL6-2;Q9BQL6;Q9BQL6-4 Q9BQL6-2 FERMT1 Fermitin family homolog 1 2 DKNNKEPIIEDILNLES(0.4)S(0.4)PT(0.176)AS(0.164)GS(0.047)S(0.056)VS(0.74)PGLY(0.01)S(0.005)K 49.09 0.039028 25739000.0 30590.0 35531.0 32887.0 29286.0 30100.0 34091.0 28832.0 38055.0 46691.0 35601.0 True False 28893.11172034682 33824.037426881696 35006.94864106049 32069.332634843024 32468.698754427252 33878.22542358563 31746.61993320352 37922.996087103784 38213.091384326646 35285.602837158876 0.8188357119385758 0.95857898710071 0.9921028925767724 0.9088503541470224 0.9201684580611679 0.960114684165431 0.8997046211655341 1.074744174334114 1.0829655245137222 1.0 15.106792037485821 -7.264668235408657 24.9758001929684 1.059141146095063 0.9274954796802708 0.5994896774000256 0.048470250200645965 191.557385516992 1481712.853246118 0.0248114684351778 0.012716872069631378 5.436654877747402e-08 7.264668235408657 -0.13164566641479225 DKNNKEPIIEDILNLES(ph)SPTASGSSVSPGLYSK ddPTM_KYSE-520_SHP099_60min_R1 1 DKNNKEPIIEDILNLESSPTASGSSVSPGLYSK 33 2 Q9BQL6-2;Q9BQL6;Q9BQL6-4 Q9BQL6-2 FERMT1 Fermitin family homolog 1 1 DKNNKEPIIEDILNLES(0.455)S(0.429)PT(0.117)ASGSSVSPGLYSK 223.92 7.0133e-23 3930200000.0 648840.0 677420.0 598770.0 597070.0 515200.0 600970.0 404830.0 390650.0 581120.0 457370.0 True False 612847.5517695274 644875.7263718499 637367.6722658735 653815.3532843582 555743.3089129871 597219.1233114973 445754.16716005804 389294.92632839544 475603.2568430721 453318.0576284754 1.3519151541759165 1.4225679200725085 1.4060054779204034 1.4422883498283312 1.2259456678614291 1.317439517931047 0.9833143852508596 0.858767745465478 1.0491601842008704 1.0 18.79016410561917 -6.727660151005434 3.1606785321957305 0.9528689902868392 1.372064830808835 0.8761130273487067 0.07161968707176215 0.0818268221381043 1.6786476396084462 0.03215195115537965 0.02262274591662386 1.8721465804700408e-07 6.727660151005434 0.41919584052199577 DKNNKEPIIEDILNLESS(ph)PTAS(ph)GSSVSPGLYSK ddPTM_KYSE-520_SHP099_60min_R1 1 DKNNKEPIIEDILNLESSPTASGSSVSPGLYSK 33 2 Q9BQL6-2;Q9BQL6;Q9BQL6-4 Q9BQL6-2 FERMT1 Fermitin family homolog 1 2 DKNNKEPIIEDILNLES(0.465)S(0.516)PT(0.118)AS(0.444)GS(0.03)S(0.023)VS(0.404)PGLYSK 114.92 0.00013155 557400000.0 177900.0 192240.0 182660.0 216330.0 189830.0 193510.0 208340.0 243550.0 325020.0 246060.0 True False 168031.53236514225 183004.50184187715 194434.55586633316 236889.93815801368 204768.54101504743 192302.2323111103 229401.0404024565 242705.1818949975 266004.56108744367 243880.09983178324 0.6889923879850891 0.7503871860315985 0.7972547001598111 0.9713377119388132 0.8396279202619932 0.7885113727760122 0.940630418638857 0.9951823952114333 1.090718600127361 1.0 17.895812516108 -3.176184064319702 0.22018624396444775 1.0593783862928707 0.15628131633908993 0.690129457075086 0.06904062306717137 12.59749981377662 0.36456582651533537 0.1287394485087664 3.3468851716933345 0.0006665242205420181 3.176184064319702 -0.9030970699537808 DKNNKEPIIEDILNLESS(ph)PTASGSSVSPGLYSK ddPTM_KYSE-520_SHP099_60min_R1 1 DKNNKEPIIEDILNLESSPTASGSSVSPGLYSK 33 2 Q9BQL6-2;Q9BQL6;Q9BQL6-4 Q9BQL6-2 FERMT1 Fermitin family homolog 1 1 DKNNKEPIIEDILNLES(0.078)S(0.918)PT(0.004)ASGSSVSPGLYSK 237.13 3.2286e-31 3615200000.0 1061100.0 1077900.0 985090.0 965080.0 865920.0 853650.0 675080.0 693930.0 1031400.0 688750.0 True False 1002238.6677495906 1026116.0660391153 1048590.4775997284 1056800.9130381183 934062.9775891567 848322.053704611 743323.6745458879 691522.9187944793 844123.7594781549 682648.2108393923 1.4681627400989246 1.5031403433657153 1.5360627347288718 1.5480900649232838 1.3682933065050034 1.2426928544374332 1.0888824767179692 1.0130004119459635 1.2365428431141867 1.0 19.380782780292872 -6.2939598760647915 1.6409647855372944 1.0833607398925 1.5150785700167502 0.8922554132156575 0.06692738891975464 0.1105853068619961 0.5906963798677807 0.02856654072460563 0.02536214262275735 5.082063929578172e-07 6.2939598760647915 0.43171783012425013 DKNNKEPIIEDILNLESSPTASGSSVS(ph)PGLYSK ddPTM_KYSE-520_SHP099_60min_R1 4 DKNNKEPIIEDILNLESSPTASGSSVSPGLYSK 33 2 Q9BQL6-2;Q9BQL6;Q9BQL6-4 Q9BQL6-2 FERMT1 Fermitin family homolog 1 1 DKNNKEPIIEDILNLESSPTAS(0.002)GS(0.036)S(0.152)VS(0.808)PGLYS(0.002)K;DKNNKEPIIEDILNLESSPTAS(0.01)GS(0.027)S(0.08)VS(0.88)PGLY(0.002)SK;DKNNKEPIIEDILNLESSPTASGSS(0.006)VS(0.994)PGLYSK;DKNNKEPIIEDILNLESS(0.001)PT(0.005)AS(0.082)GS(0.072)S(0.224)VS(0.616)PGLYS(0.001)K 247.01 1.6100999999999997e-31 1301660000.0 588057.0 639010.0 606048.0 614180.0 578370.0 757574.0 692666.0 837684.0 1182632.0 866122.0 True False 555436.3059474331 608311.0004264346 645114.8237910847 672551.482540049 623884.4285248541 752845.6996581937 762687.4390487083 834778.2697209154 967895.840526632 858448.8329127184 0.6470231942221143 0.7086164918675867 0.7514889636487815 0.7834497022473438 0.7267578504452189 0.8769837767776875 0.8884483382205884 0.9724263552068808 1.1274939209161245 1.0 19.711372620658423 -6.776674546138793 0.8363552387283583 1.063438989677172 0.7077384722707595 0.8786235736184681 0.05014635866122494 0.20241327928943664 0.2768113843710677 0.04045216820591812 0.023742385075802952 1.672343374241682e-07 6.776674546138793 -0.3557005174064126 DKNNMQHR ddPTM_KYSE-520_SHP099_60min_R1 1 DKNNMQHR 8 1 P31942-4;P31942-3;P31942;P31942-2 P31942-4 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 0 66.435 0.024494 37686000.0 114470.0 179930.0 89443.0 102620.0 190640.0 118840.0 182180.0 105120.0 93576.0 223050.0 False True 108120.12090971244 171285.89271956394 95208.63889386006 112372.97394617196 205642.28340677763 118098.27547854041 200596.53230545996 104755.36325519254 76584.95725899538 221073.95053027399 0.4890676655950309 0.7747900298009465 0.4306642128821149 0.5083049073698239 0.9301968093188657 0.5342025833223076 0.9073729936263575 0.4738476107380516 0.3464223490614639 1.0 17.754169514720562 DKPAQIR ddPTM_KYSE-520_SHP099_60min_R1 2 DKPAQIR 7 1 P50991-2;P50991 P50991-2 CCT4 T-complex protein 1 subunit delta 0 ; 111.01 0.0032489000000000003 2787700000.0 5182700.0 4310000.0 3234600.0 3313300.0 5206300.0 4704100.0 3445800.0 4033600.0 4079500.0 3877000.0 False True 4895205.299543689 4102941.130558103 3443107.4915429875 3628195.035820029 5616006.1902051335 4674739.967002701 3794135.0917672273 4019608.383049318 3338765.6358261905 3842652.7962603546 1.2739129864419891 1.0677366257370584 0.8960235738429967 0.9441901801148846 1.4614919660893109 1.2165397746973468 0.9873739036375224 1.046050370973192 0.8688699741687451 1.0 21.87367119658553 -6.826993685167024 9.334767394772692 0.9787461521736323 1.1339605567324675 0.2127692672739624 0.1574202195927982 0.6762473955795208 89.95039742464866 0.0724699305898985 0.04887454137317271 1.4893827338341573e-07 6.826993685167024 0.15521440455883528 DKPAYFAYR ddPTM_KYSE-520_SHP099_60min_R1 1 DKPAYFAYR 9 1 Q9UJ72 Q9UJ72 ANXA10 Annexin A10 0 76.143 0.01738 275240000.0 846920.0 587720.0 469590.0 353940.0 639160.0 574740.0 512500.0 489170.0 473460.0 492200.0 False True 799939.6593068368 559485.0490142952 499860.522770565 387578.35118405835 689458.2556770673 571152.8344710215 564308.5015179939 487473.183443136 387491.59895532986 487839.49092580593 1.6397599501195306 1.1468629732138387 1.0246413668191272 0.794479246541777 1.413289142231261 1.1707802363172901 1.156750349273831 0.9992491229400581 0.7943014170910209 1.0 18.89604702440515 -4.267079656139865 3.2340723411678938 1.0577266596958756 1.7187852057332054 0.5155655862095929 0.1719840802674642 0.283882190309068 4.777448682247473 0.04578256005963224 0.46887449444934465 5.406551495649123e-05 4.267079656139865 0.6610585460373297 DKPEEQWWNAEDSEGKR ddPTM_KYSE-520_SHP099_60min_R1 2 DKPEEQWWNAEDSEGKR 17 2 P46108;P46108-2 P46108 CRK Adapter molecule crk 0 ; 235.73 2.3614999999999998e-23 4083100000.0 1667350.0 1500150.0 1115230.0 867700.0 1681370.0 1562730.0 1472970.0 1285580.0 1076480.0 1459220.0 False True 1574858.7717201803 1428080.5422289444 1187119.5102310907 950165.947116482 1813684.2533133328 1552976.42240474 1621872.1824018734 1281120.6230366265 881018.3678524762 1446292.4460559802 1.0888937268633316 0.987407869081596 0.8208018464511444 0.6569666803609268 1.2540231806224427 1.0737637651635985 1.1213998848052458 0.8857963868443239 0.6091564470622808 1.0 20.463927869756933 -7.521678723584494 24.974157904904796 0.7855442646491433 0.9932118094938083 0.16481090987735691 0.17889158543661404 82.61771236966398 1719617.4686806134 0.12212605989189729 0.0475038799534258 3.008300919274019e-08 7.521678723584494 0.207667544844665 DKPHNIFK ddPTM_KYSE-520_SHP099_60min_R1 2 DKPHNIFK 8 1 M0R080;P25685-2;P25685 M0R080 DNAJB1 DnaJ homolog subfamily B member 1 0 ; 111.46 0.0010612 3115900000.0 9704500.0 8255500.0 5868300.0 5977300.0 9480600.0 8725000.0 6476800.0 8194500.0 7535200.0 6545900.0 False True 9166172.03955887 7858893.388241878 6246580.0076119825 6545380.794859231 10226669.282764878 8670544.038625587 7131538.151476582 8166075.192110683 6166997.6269340655 6487908.418633135 1.4128084812716868 1.211313859744275 0.9628033573457877 1.0088583827818896 1.5762659740069853 1.3364159108232738 1.0992045034105222 1.2586606753970029 0.9505370959341195 1.0 22.629322024373145 -7.762472645481902 24.99700553528655 0.9752684312130021 1.2264618595380836 0.25834515924098034 0.17456486900378013 41.84464244401591 1012076.2909603934 0.15009482974341332 0.047208647110988426 1.7279348129649563e-08 7.762472645481902 0.2511934283250815 DKPHVNVGTIGHVDHGK ddPTM_KYSE-520_SHP099_60min_R1 4 DKPHVNVGTIGHVDHGK 17 1 P49411;H3BNU3 P49411 TUFM Elongation factor Tu, mitochondrial 0 ;;; 282.19 8.589200000000001e-37 10651850000.0 8203630.0 8207270.0 6441090.0 7312690.0 7861090.0 8567140.0 7499770.0 8854130.0 8072160.0 5496720.0 False True 7748558.290369039 7812980.429836573 6856292.967508383 8007685.858959578 8479713.059516301 8513669.301440768 8257919.942301681 8823417.089599473 6606459.226594126 5448023.337183448 1.4222696583335372 1.4340945231478717 1.2584918498262145 1.4698332520542103 1.5564751717638925 1.5627079354330036 1.5157644215545727 1.6195630127680505 1.2126341643039975 1.0 22.377301452623996 -7.9783817841103435 4.970821143654433 1.0009435849902502 1.4759603288768195 0.7336916596779106 0.0943067063139322 0.083918909824618 5.758231780816514 0.10067047820804634 0.02625301553390535 1.0510375105964455e-08 7.9783817841103435 0.47501674388656934 DKPMYDEIFYT(ph)LSPVDGK ddPTM_KYSE-520_SHP099_60min_R1 1 DKPMYDEIFYTLSPVDGK 18 1 Q9NZN3 Q9NZN3 EHD3 EH domain-containing protein 3 1 DKPMYDEIFY(0.011)T(0.553)LS(0.435)PVDGK 74.584 0.031744 20899000.0 41100.0 37455.0 37630.0 33860.0 35305.0 32916.0 33213.0 35600.0 47971.0 35822.0 True False 38820.10106918123 35655.6055788988 40055.6900101288 37078.04421961978 38083.302642028364 32710.55903442977 36570.49416764319 35476.51190910245 39260.675650500794 35504.64494909427 1.0933809118452131 1.0042518557788982 1.128181680666282 1.0443153078359582 1.0726287418626863 0.9213036514329155 1.0300199937241201 0.99920762367763 1.1057898398024213 1.0 15.115720159283786 DKPMYDEIFYTLS(ph)PVDGK ddPTM_KYSE-520_SHP099_60min_R1 4 DKPMYDEIFYTLSPVDGK 18 1 Q9NZN3 Q9NZN3 EHD3 EH domain-containing protein 3 1 DKPMYDEIFYT(0.018)LS(0.982)PVDGK;DKPMYDEIFYTLS(1)PVDGK;DKPMYDEIFYTLS(1)PVDGK;DKPMYDEIFYTLS(1)PVDGK 220.88 1.3794999999999999e-18 1173650000.0 1880150.0 1711360.0 1523220.0 1741920.0 1709500.0 1680700.0 1674630.0 1645740.0 2071730.0 1715500.0 True False 1775854.3315138954 1629143.6967962717 1621409.1984381694 1907471.5530726572 1844027.924275528 1670210.1278759884 1843917.9432138125 1640031.3120586027 1695556.05606329 1700302.0046388027 1.04443465141426 0.9581496065708355 0.9536007097648558 1.1218427949085807 1.0845296419369082 0.9823020400606969 1.0844649586856885 0.9645529485845643 0.9972087614067591 1.0 20.697359587392004 DKPRSPFS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 DKPRSPFSK 9 2 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 DKPRS(0.242)PFS(0.758)K 96.82 0.0022962 2168400000.0 3448700.0 2672200.0 2851400.0 2541900.0 2632500.0 2760000.0 2207000.0 2219300.0 3077100.0 2117900.0 True False 3257393.7361869905 2543823.5009460286 3035205.806401307 2783481.4117499003 2839662.77312391 2742773.81622998 2430105.0982443187 2211601.7662885147 2518376.2073785434 2099137.053701269 1.5517775413679848 1.2118425028326156 1.445930269798025 1.3260122329039794 1.3527762601860234 1.3066196946949362 1.157668620998079 1.0535766411197136 1.1997197624319278 1.0 21.001364933305446 -6.747406223757427 1.8905958346736502 1.0897729037113737 1.3712225133164966 0.664595387068549 0.09364811087065641 0.20679423000170594 1.5133191969289588 0.04500948130011892 0.02869056667913842 1.7889317674684233e-07 6.747406223757427 0.2814496096051229 DKPTYDEIFYT(ph)LSPVNGK ddPTM_KYSE-520_SHP099_60min_R1 1 DKPTYDEIFYTLSPVNGK 18 1 A0A024R571;Q9H4M9 A0A024R571 EHD1 EH domain-containing protein 1 1 DKPTYDEIFY(0.001)T(0.681)LS(0.318)PVNGK 78.413 0.021741999999999997 43753000.0 34210.0 39201.0 29782.0 29379.0 35443.0 34093.0 35927.0 30253.0 47576.0 39360.0 True False 32312.303104055718 37317.72511809939 31701.79537288482 32171.17132688157 38232.16245691578 33880.21294084377 39558.85177373071 30148.059404103293 38937.39769336112 39011.301021616615 0.8282805817255645 0.9565875564473281 0.8126310720916097 0.8246628665128382 0.9800278754028453 0.8684717518667309 1.0140356957541787 0.7728032291821774 0.9981055918074985 1.0 15.251604492398865 -5.752460111405573 24.999011200510214 0.9277821580252863 0.8596932082570206 0.20461703183844826 0.07853886495496705 373.14013890767075 1038847.5436588927 0.022221062380715105 0.02825669302972968 1.7682346171140995e-06 5.752460111405573 -0.06808894976826574 DKPTYDEIFYTLS(ph)PVNGK ddPTM_KYSE-520_SHP099_60min_R1 6 DKPTYDEIFYTLSPVNGK 18 1 A0A024R571;Q9H4M9 A0A024R571 EHD1 EH domain-containing protein 1 1 DKPTYDEIFYTLS(1)PVNGK;DKPTYDEIFYT(0.003)LS(0.996)PVNGK;DKPTYDEIFYTLS(1)PVNGK;DKPTYDEIFYTLS(1)PVNGK;DKPTYDEIFYTLS(1)PVNGK;DKPTYDEIFYTLS(1)PVNGK 256.58 1.3268e-25 31897700000.0 3786230.0 3398200.0 3381870.0 3530910.0 3390100.0 3469230.0 3454820.0 3503140.0 4129210.0 3477490.0 True False 3576200.2742376155 3234945.3711978113 3599870.751383315 3866486.624793196 3656881.582969559 3447577.248724474 3804066.9213939467 3490988.4249790185 3379449.5529133105 3446682.144046277 1.0375776253157156 0.9385679433149312 1.0444452377489037 1.1217995925362831 1.0609860237000317 1.0002597003845404 1.103689508463961 1.0128547626619053 0.9804935331071644 1.0 21.716776827602224 -4.857050473167364 12.718327286838862 1.0455324496401346 0.9881057782601772 0.150588396170932 0.04874452121918372 0.853128977923602 107.64490576055258 0.01285899187206058 0.02678365575953007 1.3897911020247897e-05 4.857050473167364 -0.057426671379957384 DKPVYDELFYT(ph)LSPINGK ddPTM_KYSE-520_SHP099_60min_R1 1 DKPVYDELFYTLSPINGK 18 1 Q9H223 Q9H223 EHD4 EH domain-containing protein 4 1 DKPVYDELFYT(0.74)LS(0.26)PINGK 136.64 2.3650999999999998e-05 1836600000.0 249260.0 234040.0 215050.0 219510.0 228820.0 233290.0 205790.0 197520.0 273310.0 241240.0 True False 235433.05091250892 222796.36709879778 228912.4670921658 240372.16440191198 246826.83219229386 231833.95057546854 226593.2615168546 196834.84922151474 223683.79358442337 239102.80128188 0.9846519975939354 0.9318015761602958 0.9573809502227423 1.0053088592573014 1.0323042259187418 0.969599474922746 0.9476813333095256 0.8232226814836214 0.9355130612657312 1.0 17.867271506919653 -7.010459443481633 13.456232958212647 0.9047104783150228 0.9786401747149319 0.22806882746931312 0.04798321919032527 1.4536253508304184 1864.0778497708657 0.021223715595280076 0.01324353448031193 9.762039408173059e-08 7.010459443481633 0.0739296963999091 DKPVYDELFYTLS(ph)PINGK ddPTM_KYSE-520_SHP099_60min_R1 7 DKPVYDELFYTLSPINGK 18 1 Q9H223 Q9H223 EHD4 EH domain-containing protein 4 1 DKPVYDELFYTLS(1)PINGK;DKPVYDELFYTLS(1)PINGK;DKPVYDELFYT(0.019)LS(0.981)PINGK;DKPVYDELFYT(0.022)LS(0.978)PINGK;DKPVYDELFYTLS(1)PINGK;DKPVYDELFYTLS(1)PINGK;DKPVYDELFYTLS(1)PINGK 302.84 8.704e-39 16109210000.0 9778190.0 8836980.0 8507800.0 8305960.0 8255220.0 8715900.0 7837790.0 8381190.0 10028790.0 8292010.0 True False 9235774.308361495 8412438.216222601 9056226.400961298 9095355.941122074 8904858.848223355 8661500.83510106 8630110.30265897 8352117.608074459 8207814.541222528 8218549.242486166 1.1237718526545704 1.0235916301059702 1.1019251857912735 1.1066863107789409 1.0835073910842172 1.0538965673314988 1.0500770936609127 1.0162520612394468 0.9986938447471794 1.0 22.97045231780649 -7.017645264644799 1.1227037270492246 0.9973895378560063 1.0859916920056842 0.6680137704258085 0.025192652612812602 0.31893948574244485 0.7481132316718467 0.01983819080632593 0.0090874588066462 9.60184598085595e-08 7.017645264644799 0.08860215414967798 DKQPYEQK ddPTM_KYSE-520_SHP099_60min_R1 1 DKQPYEQK 8 1 P26583 P26583 HMGB2 High mobility group protein B2 0 135.55 0.00079106 629060000.0 1572700.0 1586900.0 1362400.0 940670.0 1465900.0 1303000.0 1186100.0 1295700.0 1489300.0 1324900.0 False True 1485459.195900278 1510662.942014537 1450222.4839170743 1030070.993977252 1581257.9901699312 1294867.4936766927 1306002.5632204742 1291205.5191186531 1218880.6621978031 1313162.416756602 1.1312075162562405 1.1504006836760865 1.1043740404168731 0.7844200997782427 1.2041602546587513 0.9860680424245646 0.994547625301513 0.9832793740075348 0.9282025183208741 1.0 20.324613934418693 -5.021834250940395 24.950218181908117 0.9884185803761226 1.1374499743111859 0.32915737638799547 0.096018823330062 818.9573461237736 935832.5494553787 0.025148138893475405 0.04408876677127283 9.509676624649826e-06 5.021834250940395 0.14903139393506326 DKRPEGYNLK ddPTM_KYSE-520_SHP099_60min_R1 2 DKRPEGYNLK 10 2 A0A590UJY3;P63151;P63151-2;Q9Y2T4-3;Q00005-6;Q9Y2T4-4;Q00005;Q00005-2;Q9Y2T4-2;Q9Y2T4;Q00005-3;Q00005-4;Q00005-5;Q00005-7 A0A590UJY3 PPP2R2A;PPP2R2C;PPP2R2B Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B gamma isoform;Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform 0 ; 164.65 4.1852e-05 2230170000.0 1703750.0 1499860.0 964890.0 1043370.0 1726140.0 1715800.0 1362840.0 1609480.0 1436240.0 1395180.0 False True 1609239.5911585782 1427804.4742642415 1027088.3532785854 1142531.5710993714 1861977.39760688 1705091.0557563072 1500609.1672366506 1603897.0895354566 1175455.0206640523 1382819.7906336156 1.1637377495307728 1.0325311251222502 0.7427492434194681 0.8262331641752518 1.3465076289902618 1.2330536974561415 1.085180569008969 1.1598742659016632 0.8500420869196936 1.0 20.39918172574081 -4.259589501172572 21.145162825345597 1.0381910480878807 1.1637380955603225 0.04610519616635811 0.17864714315386082 83.18755796412798 950101.9723156404 0.048532558590788706 0.2990894833355414 5.50060550114613e-05 4.259589501172572 0.12554704747244183 DKRPEGYNLKEEDGR ddPTM_KYSE-520_SHP099_60min_R1 2 DKRPEGYNLKEEDGR 15 3 A0A590UJY3;P63151;P63151-2 A0A590UJY3 PPP2R2A Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform 0 ; 122.75 5.3182e-05 3664500000.0 2958000.0 2791800.0 2344300.0 1852730.0 2730800.0 2450300.0 1770630.0 2239000.0 2821300.0 1936840.0 False True 2793913.843373191 2657677.7374227694 2495417.3290126226 2028812.9021564145 2945698.423873423 2435006.7688073646 1949622.560083526 2231233.4315865296 2309023.039185301 1919681.1044387198 1.4554051904313978 1.38443709805636 1.2999124298523725 1.0568489200968632 1.5344727918935746 1.2684433696706707 1.0155970986928897 1.1622937926655803 1.2028159436722787 1.0 20.872435241074868 -1.0000000063408645 0.11001523550601246 0.8925186812675867 2.533089905769011 0.43752393974329684 0.13146281344337932 111.24314598471058 0.8561957527908508 1.2729672205226608 27.709229228978888 0.099999998539962 1.0000000063408645 1.6405712245014241 DKRPLS(ph)GPDVGTPQPAGLASGAK ddPTM_KYSE-520_SHP099_60min_R1 8 DKRPLSGPDVGTPQPAGLASGAK 23 2 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 DKRPLS(0.999)GPDVGT(0.001)PQPAGLASGAK;DKRPLS(0.991)GPDVGT(0.009)PQPAGLASGAK;DKRPLS(0.951)GPDVGT(0.049)PQPAGLASGAK;DKRPLS(1)GPDVGTPQPAGLASGAK;DKRPLS(1)GPDVGTPQPAGLASGAK;DKRPLS(0.959)GPDVGT(0.041)PQPAGLASGAK;DKRPLS(1)GPDVGTPQPAGLASGAK;DKRPLS(1)GPDVGTPQPAGLASGAK 248.92 9.728e-29 19585600000.0 11476590.0 10292500.0 10116940.0 10018830.0 10286010.0 9621900.0 9713640.0 10502110.0 11912020.0 10278710.0 True False 10839960.674685044 9798032.850642525 10769094.140076341 10971016.590928929 11095460.467608841 9561846.153037421 10695589.527190726 10465680.631620908 9749097.445587512 10187648.626115363 1.064029696400946 0.9617560646453702 1.0570735736282149 1.0768938931409013 1.0891090647911004 0.9385724325558561 1.0498585021644042 1.0272910870515133 0.9569526593797459 1.0 23.280317770975667 -6.246742554180846 24.99747653236984 0.9996983469343175 1.0467950187204207 0.27985474021834544 0.043785606502082894 1365.4090572263883 2322393.6033824366 0.014989067531749754 0.01492139728836386 5.665750500473003e-07 6.246742554180846 0.04709667178610322 DKS(ph)FDDEESVDGNRPSSAASAFK ddPTM_KYSE-520_SHP099_60min_R1 5 DKSFDDEESVDGNRPSSAASAFK 23 2 E7ERI8;E7EW49;O75122-3 E7ERI8 CLASP2 CLIP-associating protein 2 1 DKS(0.997)FDDEES(0.003)VDGNRPSSAASAFK;DKS(0.98)FDDEES(0.019)VDGNRPSS(0.001)AASAFK;DKS(0.995)FDDEES(0.005)VDGNRPSSAASAFK;DKS(0.993)FDDEES(0.007)VDGNRPSSAASAFK;DKS(0.999)FDDEES(0.001)VDGNRPSSAASAFK 206.0 3.5638e-16 5774160000.0 2028371.0 1891069.0 1791137.0 1719999.0 1784834.0 1745077.0 1788668.0 1877184.0 2230252.0 1666783.0 True False 1915853.2171726567 1800219.2066875622 1906596.5569405293 1883467.1878234441 1925290.2814837026 1734185.3271395538 1969484.017157438 1870672.4868420372 1825294.4568777143 1652016.5993575503 1.1597057910421176 1.0897101199755779 1.1541025421185127 1.1401018540345795 1.165418242306055 1.0497384395616594 1.1921696294839574 1.1323569554746118 1.1048886903361321 1.0 20.655796752262226 -8.19605070236855 2.6390610403131785 1.0000611489571911 1.1345354579473292 0.5316592501188572 0.03812544710502454 0.656765328415611 7.3916495082764095 0.034882376246844156 0.009397744133460187 6.367211815876822e-09 8.19605070236855 0.13447430899013812 DKS(ph)HS(ph)HTPSR ddPTM_KYSE-520_SHP099_60min_R1 2 DKSHSHTPSR 10 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 DKS(1)HS(0.989)HT(0.006)PS(0.006)R;DKS(1)HS(0.938)HT(0.061)PSR 125.36 0.00028738 645520000.0 623870.0 575200.0 534960.0 825550.0 613690.0 646460.0 678360.0 567118.0 716810.0 611190.0 True False 589262.6874459886 547566.5286071979 569444.377566263 904010.0237893411 661983.9115815428 642425.2033478393 746935.2489556028 565150.8000243367 586655.3733096132 605775.332098625 0.9727413056001627 0.9039102445955157 0.9400256949940525 1.4923189768350638 1.0927878315681672 1.0605007653947311 1.2330235474725402 0.9329379558366131 0.9684372113292012 1.0 19.208423305485958 -10.256614148969021 13.236339505786926 1.0000000007845335 1.0719280974437018 0.012552988898099748 0.1699237573788839 2.513397932721632e-10 3.1007976877930776e-18 0.17299962474273892 0.04195857211803123 5.538419542527807e-11 10.256614148969021 0.07192809665916822 DKS(ph)HSHT(ph)PSRR ddPTM_KYSE-520_SHP099_60min_R1 1 DKSHSHTPSRR 11 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 DKS(0.997)HS(0.003)HT(0.854)PS(0.146)RR 96.096 0.0085154 1515600000.0 777500.0 822250.0 586820.0 841620.0 872040.0 1069600.0 640260.0 560110.0 776470.0 1172600.0 True False 734370.5250921758 782747.8757775873 624647.3561451973 921607.3117577208 940664.586771121 1062924.229652026 704983.7291354364 558167.109140657 635482.6212158252 1162211.676268994 0.6318732982013214 0.6734985474336433 0.5374643611828784 0.7929771577552234 0.8093745795007863 0.9145702554497585 0.606588062682884 0.4802628647928582 0.546787331595129 1.0 20.14844142334346 -5.264651388219788 24.708613697598057 0.7192698510975769 0.6202007214480777 0.107821509433213 0.15488617158627951 719.8691848440805 5537658.504411537 0.04661647322711706 0.07258805289126546 5.4368657810213646e-06 5.264651388219788 -0.09906912964949921 DKS(ph)HSHTPSR ddPTM_KYSE-520_SHP099_60min_R1 1 DKSHSHTPSR 10 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DKS(0.766)HS(0.232)HT(0.001)PSR 62.14 0.021681 821180000.0 462630.0 598440.0 321110.0 508570.0 740650.0 816620.0 398410.0 495920.0 434230.0 969680.0 True False 436966.9916699593 569690.0441232462 341809.26439416537 556904.3398928546 798934.9412779586 811523.1716701913 438685.1709068961 494199.76926859864 355384.7780475069 961089.3895996242 0.45465801245812665 0.5927544828692477 0.35564773484447487 0.5794511373441057 0.8312805759002118 0.8443784526726074 0.45644575380199126 0.5142079130375948 0.3697728659719727 1.0 19.874311094753853 -5.5162469715636355 24.832293398682847 0.6488191091949476 0.4780861538066347 0.1812758948608747 0.18882452688355214 572.382763029651 2143257.6153975134 0.057059265571560804 0.07654949923372116 3.046162226650622e-06 5.5162469715636355 -0.17073295538831285 DKS(ph)PGRPLER ddPTM_KYSE-520_SHP099_60min_R1 9 DKSPGRPLER 10 2 O14578-4;H7BYJ3;O14578;O14578-3 O14578-4 CIT Citron Rho-interacting kinase 1 DKS(1)PGRPLER;DKS(1)PGRPLER;DKS(1)PGRPLER;DKS(1)PGRPLER;DKS(1)PGRPLER;DKS(1)PGRPLER;DKS(1)PGRPLER;DKS(1)PGRPLER;DKS(1)PGRPLER 154.65 7.2897e-05 43438000000.0 19361290.0 17154550.0 16387640.0 16051010.0 16699000.0 17151180.0 16189690.0 16446590.0 19798660.0 15881770.0 True False 18287280.64792527 16330419.668495506 17444013.495551087 17576493.164487876 18013116.295687072 17044133.123712804 17826301.861348 16389540.61795296 16203722.427603005 15741069.8736301 1.1617558904659113 1.0374402629298216 1.1081847444673254 1.116600923926558 1.144338754627039 1.082781110848484 1.1324707916589036 1.041196103538629 1.0293914300417377 1.0 23.90803026407382 -7.413544075034641 3.863713710496557 1.0192032869325065 1.1091335746838642 0.6021842477867503 0.033197662193411755 0.16879057686868995 4.402116490941837 0.02021178230951052 0.008665287932566221 3.858832476603991e-08 7.413544075034641 0.0899302877513577 DKS(ph)PPPLSWGK ddPTM_KYSE-520_SHP099_60min_R1 1 DKSPPPLSWGK 11 1 Q9UK61;Q9UK61-2;A0A087X0F1;Q9UK61-4 Q9UK61 FAM208A Protein FAM208A 1 DKS(1)PPPLSWGK 95.428 0.0014744 722580000.0 429570.0 366270.0 390570.0 383730.0 452210.0 461250.0 352740.0 402930.0 460380.0 416550.0 True False 405740.89577343484 348673.8394175213 415746.76713409525 420199.5838273683 487796.3542770617 458371.1676579996 388398.40161064814 401532.32987456914 376786.59723536234 412859.69107099634 0.9827573496480252 0.8445334988093147 1.0069928746388623 1.0177781772236751 1.1815063684509202 1.1102347300336883 0.9407515676890293 0.9725636543324369 0.9126262635568586 1.0 18.65529204448699 -4.90149021121791 7.474100233486944 1.0244702463935098 0.9143204432168583 0.21148787014781056 0.08027972824066147 0.3471325083832755 22.963487883114897 0.02305121888753434 0.04846618835921146 1.254613015894048e-05 4.90149021121791 -0.11014980317665146 DKS(ph)PSSLLEDAK ddPTM_KYSE-520_SHP099_60min_R1 11 DKSPSSLLEDAK 12 1 P42684-4;P42684-7;P42684-10;P42684-5;P42684-2;P42684-6;P42684-3;P42684 P42684-4 ABL2 Abelson tyrosine-protein kinase 2 1 DKS(0.977)PS(0.02)S(0.003)LLEDAK;DKS(0.944)PS(0.044)S(0.012)LLEDAK;DKS(0.97)PS(0.026)S(0.004)LLEDAK;DKS(0.941)PS(0.045)S(0.014)LLEDAK;DKS(0.997)PS(0.003)SLLEDAK;DKS(0.98)PS(0.01)S(0.01)LLEDAK;DKS(0.999)PS(0.001)SLLEDAK;DKS(0.967)PS(0.033)SLLEDAK;DKS(0.845)PS(0.152)S(0.003)LLEDAK;DKS(0.783)PS(0.216)S(0.001)LLEDAK;DKS(0.993)PS(0.007)SLLEDAK 218.63 5.3606e-11 26166187000.0 15383950.0 13725540.0 12587290.0 12877300.0 13586820.0 12783850.0 12865700.0 13483860.0 16128460.0 12655190.0 True False 14530571.626355987 13066144.45594445 13398686.853776073 14101154.720298583 14656025.435569013 12704061.250221608 14166290.513131829 13437087.636816597 13199938.22939019 12543074.862188844 1.1584537113908537 1.0417018633391404 1.06821389499687 1.1242183336405476 1.1684555499026532 1.0128346828669625 1.1294113021549586 1.071275407701086 1.0523686077312242 1.0 23.580387724045757 -8.019061241485785 1.1917601291384496 0.9999410189613266 1.098338795837321 0.31095386321776053 0.04670675876217249 0.6567412067133243 2.093289672024469 0.043829082004384456 0.013782460690743901 9.570591033027658e-09 8.019061241485785 0.09839777687599438 DKS(ph)PVREPIDNLTPEER ddPTM_KYSE-520_SHP099_60min_R1 20 DKSPVREPIDNLTPEER 17 2 Q5QP22;Q5QP23;G3XAC6;Q14498-2;Q14498;H0Y4X3;Q14498-3 Q5QP22;Q14498-3 RBM39 RNA-binding protein 39 1 DKS(0.706)PVREPIDNLT(0.294)PEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(0.999)PVREPIDNLT(0.001)PEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(0.999)PVREPIDNLT(0.001)PEER;DKS(0.996)PVREPIDNLT(0.004)PEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER;DKS(1)PVREPIDNLTPEER 280.85 3.011e-31 268545880000.0 87018260.0 73404963.0 69688024.0 69388640.0 77589012.0 72705426.0 72498493.0 75088730.0 85579560.0 75348550.0 True False 82191183.65119942 69878478.39438418 74180225.53182076 75983315.48314466 83694825.82331036 72251644.46762553 79827348.18954693 74828264.72147134 70040469.189147 74681020.46728492 1.1005632105309062 0.9356926024463663 0.9932942140810256 1.0174380988330258 1.1206974047706548 0.9674699678116528 1.0689107846955095 1.0019716422360743 0.9378617050342692 1.0 26.154238305394195 -7.529150998580641 22.420040653374343 0.969259341312394 1.0256311986245485 0.1557329004988114 0.05571427061580482 90.68328214555999 324104.1925794269 0.03640367752913802 0.013877110601560418 2.956984182602823e-08 7.529150998580641 0.05637185731215455 DKSDS(ph)DTEGLLFSR ddPTM_KYSE-520_SHP099_60min_R1 5 DKSDSDTEGLLFSR 14 1 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 DKSDS(0.791)DT(0.209)EGLLFSR;DKSDS(0.994)DT(0.006)EGLLFSR;DKSDS(0.788)DT(0.212)EGLLFSR;DKS(0.012)DS(0.981)DT(0.007)EGLLFSR;DKS(0.065)DS(0.91)DT(0.025)EGLLFSR 264.21 6.5781e-25 2589080000.0 2723690.0 2239240.0 1999430.0 2241980.0 2381260.0 2132130.0 2096360.0 2270830.0 2804400.0 2000280.0 True False 2572601.486158596 2131663.5492322375 2128316.4570011096 2455057.1051241313 2568651.614483966 2118822.585796533 2308280.5273019783 2262953.020745707 2295191.653170968 1982559.07539429 1.2976165593688342 1.0752080861995468 1.0735198176013148 1.2383273394442842 1.2956242496698942 1.0687311223627185 1.1642934407101635 1.141430310365734 1.1576914310684547 1.0 20.91893242466507 -11.351638285070937 0.30741313889538435 0.7733151849980447 1.1769522986506842 0.29143157278935994 0.08059340602276252 62.06613358147162 2.434248681325227 9.62358323169234 0.08325608376795987 4.450017459545023e-12 11.351638285070937 0.40363711365263943 DKSDS(ph)PAIQLR ddPTM_KYSE-520_SHP099_60min_R1 4 DKSDSPAIQLR 11 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 DKS(0.009)DS(0.991)PAIQLR;DKS(0.011)DS(0.989)PAIQLR;DKS(0.061)DS(0.939)PAIQLR;DKS(0.091)DS(0.909)PAIQLR 163.9 1.1983e-05 1246180000.0 2331620.0 2071570.0 2038470.0 1977060.0 2125710.0 2050200.0 1977380.0 2060200.0 2488530.0 2085170.0 True False 2202280.3906307635 1972048.6677100363 2169873.0378673216 2164959.1879752353 2292991.2833645684 2037403.9413169238 2177272.8677690746 2053053.6470542941 2036675.6827362548 2066697.0160377112 1.0656038952690772 0.9542030846354366 1.0499231484000593 1.0475455140134247 1.1094956181630873 0.9858261397323985 1.05350365867531 0.9933984667914341 0.9854737617229382 1.0 20.978895470182664 -7.278771555795132 22.25330721310829 0.9920770406325 1.0363575612860922 0.2073151934807742 0.040272339603062084 342.77920547973997 440095.7335422366 0.021969932335775155 0.010611597842924592 5.262940306854518e-08 7.278771555795132 0.044280520653592226 DKSDSDT(ph)EGLLFSR ddPTM_KYSE-520_SHP099_60min_R1 1 DKSDSDTEGLLFSR 14 1 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 DKS(0.011)DS(0.297)DT(0.692)EGLLFSR 156.86 2.5503000000000003e-05 0.0 464230.0 446590.0 404870.0 449250.0 471960.0 381740.0 437400.0 489950.0 544930.0 378440.0 True False 438478.2364804379 425135.1460547441 430968.5680149044 491946.5849280623 509100.566914933 379357.4190607368 481616.66061262577 488250.4778051896 445984.44856741384 375087.3160218652 1.1690031034130663 1.1334298119266752 1.1489819826106349 1.3115521744259275 1.357285477723954 1.0113842906877253 1.2840121220855962 1.3016981831951038 1.1890150093516247 1.0 18.51686695198764 -11.380410798652298 1.7612782431754053 0.00018043111376871192 1.2137480810274237 0.2936479737766732 0.0985147013478263 1535465.9072076974 152954.42021029498 6092265.664716334 0.027841496044945367 4.164752536315267e-12 11.380410798652298 1.213567649913655 DKSFDDEES(ph)VDGNRPSSAASAFK ddPTM_KYSE-520_SHP099_60min_R1 1 DKSFDDEESVDGNRPSSAASAFK 23 2 E7ERI8;E7EW49;O75122-3 E7ERI8 CLASP2 CLIP-associating protein 2 1 DKS(0.084)FDDEES(0.916)VDGNRPSSAASAFK 196.8 2.2642e-15 1925000000.0 552260.0 509310.0 467810.0 524950.0 492830.0 494370.0 487690.0 509050.0 672330.0 413750.0 True False 521625.0368969839 484841.98311010393 497965.781122465 574841.0901680269 531612.9171808762 491284.4534527599 536990.4645957283 507284.22436316375 550251.8200600612 410084.4968926293 1.2719940423243037 1.1822977624951476 1.2143004305106546 1.4017625502154378 1.2963497064851643 1.198007867099133 1.3094629732767642 1.237023657824314 1.3418010781425158 1.0 18.64556167852893 -9.793657592770343 5.067885059199059 0.9999998342953362 1.270535445565411 0.6150926949834479 0.06466432910452896 11244179.976253344 10864653.531029154 21.028568615319003 0.01604658406595782 1.608208700076122e-10 9.793657592770343 0.27053561127007475 DKSHS(ph)HTPSR ddPTM_KYSE-520_SHP099_60min_R1 2 DKSHSHTPSR 10 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DKS(0.021)HS(0.979)HTPSR;DKS(0.004)HS(0.996)HTPSR 121.76 0.00031475 314824000.0 161890.0 264126.0 141147.0 278936.0 304709.0 374763.0 234401.0 179500.0 222116.0 402787.0 True False 152909.63898028608 251436.99049879162 150245.56146318497 305445.99357483396 328687.8647429489 372423.965105724 258096.5406133063 178877.35639561515 181785.3334887046 399218.6205435437 0.3830223118653551 0.629822802745161 0.3763490822613003 0.7651095862186074 0.823327990802218 0.9328822503285586 0.6465042644100693 0.448068670123829 0.4553528421124256 1.0 18.60681948754516 -5.269155549499099 24.36980308250313 0.7110216719018865 0.4797405366468437 0.30025809767158074 0.18152439331816445 614.5182562755836 1940819.7001932834 0.054692018064376444 0.08293258701950229 5.380770271253227e-06 5.269155549499099 -0.2312811352550428 DKSKYDEIFYNLAPADGKLS(ph)GSK ddPTM_KYSE-520_SHP099_60min_R1 1 DKSKYDEIFYNLAPADGKLSGSK 23 3 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 DKSKYDEIFYNLAPADGKLS(0.975)GS(0.025)K 135.39 1.5853e-06 475090000.0 465860.0 490030.0 421740.0 264520.0 279180.0 271570.0 230770.0 244360.0 456670.0 227360.0 True False 440017.817131114 466488.2232499745 448926.0352078583 289659.901269162 301149.87768308935 269875.0308962236 254098.4836981609 243512.37219405305 373750.23971387296 225345.76728340326 1.9526340451637203 2.0700997798787206 1.9921653759898323 1.2854020058201265 1.3363902118665136 1.197604171356894 1.1275937718350715 1.0806165792668418 1.6585633900273382 1.0 17.781780826302406 -5.268487145007882 4.6931722363392785 1.2372747935448232 2.0197880866383295 0.8095548587351351 0.169980936246563 0.0753531840372336 4.717012199065781 0.04673293831297682 0.0761532744285265 5.38905796594243e-06 5.268487145007882 0.7825132930935064 DKSPS(ph)SLLEDAK ddPTM_KYSE-520_SHP099_60min_R1 1 DKSPSSLLEDAK 12 1 P42684-4;P42684-7;P42684-10;P42684-5;P42684-2;P42684-6;P42684-3;P42684 P42684-4 ABL2 Abelson tyrosine-protein kinase 2 1 DKS(0.355)PS(0.642)S(0.002)LLEDAK 176.08 8.2395e-07 81125000.0 122920.0 114360.0 106570.0 100980.0 119660.0 108510.0 88612.0 113120.0 125280.0 107300.0 True False 116101.38256505503 108865.97394214044 113439.67271802883 110577.10883925592 129076.56122773307 107832.74884025918 97569.76572978048 112727.6131224066 102532.31005179686 106349.40547813672 1.0916975233013702 1.0236632113991562 1.0666695521993277 1.039752957170864 1.2137027061638683 1.01394782937858 0.917445333061489 1.0599740789860939 0.964107975882154 1.0 16.69845244270351 -6.506572257504111 24.99708507599836 0.9868535206016181 1.0832097074325864 0.4122349401382447 0.05801949593511724 762.7478644203302 1169260.2385363062 0.020695830311211364 0.017759427223793065 3.114782618281015e-07 6.506572257504111 0.09635618683096825 DKST(ph)TPGGTGIKPFLER ddPTM_KYSE-520_SHP099_60min_R1 1 DKSTTPGGTGIKPFLER 17 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 DKS(0.028)T(0.486)T(0.486)PGGTGIKPFLER 92.01 0.0012274 723720000.0 906250.0 767080.0 790690.0 677090.0 653230.0 755850.0 658640.0 676310.0 931360.0 747200.0 True False 855978.5059354141 730228.3253894455 841659.1425487311 741440.4300254678 704635.4846297184 751132.459781679 725221.7589069493 673964.038461941 762248.5016749791 740580.3893128026 1.1558211887431848 0.9860216877563246 1.136485862567494 1.0011613063552267 0.9514638718472709 1.0142483795427906 0.9792613595667787 0.9100484541419249 1.0292582853595176 1.0 19.49829682165665 -5.430490368025172 6.080796498499886 0.9776567243818554 1.0814826166222684 0.4756353418136523 0.05239796485858141 0.2030889840950377 10.926502153244101 0.013974587379377994 0.020770918562946293 3.7111596017532376e-06 5.430490368025172 0.10382589224041305 DKSTT(ph)PGGTGIKPFLER ddPTM_KYSE-520_SHP099_60min_R1 5 DKSTTPGGTGIKPFLER 17 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 DKS(0.011)T(0.041)T(0.948)PGGTGIKPFLER;DKS(0.255)T(0.255)T(0.49)PGGT(0.001)GIKPFLER;DKS(0.001)T(0.04)T(0.955)PGGT(0.004)GIKPFLER;DKS(0.007)T(0.029)T(0.964)PGGTGIKPFLER;DKS(0.017)T(0.12)T(0.863)PGGTGIKPFLER 163.04 9.746499999999999e-08 8027020000.0 11914700.0 10842760.0 10560600.0 9270400.0 8854230.0 9619310.0 8962390.0 9722700.0 11872100.0 10056080.0 True False 11253767.83963439 10321857.534285426 11241353.173557417 10151456.028752599 9551007.527322669 9559272.318188142 9868395.845697291 9688974.222995237 9716425.91128621 9966990.954711858 1.1291038479687006 1.0356041839694663 1.1278582698264725 1.018507599222164 0.9582638903477148 0.9590931065979378 0.9901078360096277 0.9721062522299982 0.9748605126096564 1.0 23.248726588496723 -5.474398079132987 4.317758968865915 0.9748074917693336 1.0906199146563704 0.7992666637295854 0.027182596861838097 0.08862047570288276 3.512031381022143 0.007443839850441514 0.010900971609094147 3.354300144228613e-06 5.474398079132987 0.11581242288703686 DKT(ph)PLHQK ddPTM_KYSE-520_SHP099_60min_R1 2 DKTPLHQK 8 1 P10244-2;P10244 P10244-2 MYBL2 Myb-related protein B 1 DKT(1)PLHQK;DKT(1)PLHQK 93.62299999999999 0.010367 983740000.0 1390320.0 1034230.0 784330.0 856650.0 1100970.0 1220940.0 878820.0 760610.0 1016590.0 1289450.0 True False 1313196.1780657922 984544.038389122 834889.1667723702 938065.758438785 1187610.0753376011 1213319.6605753042 967659.702056672 757971.6214377083 832002.8821484363 1278026.4761769196 1.0275187584486347 0.7703627872673505 0.6532643746707443 0.7339955595011686 0.9292531081908494 0.949369737788861 0.7571515301868574 0.5930797487897902 0.6510059827847108 1.0 20.28548629344436 -6.992404160631108 24.86224428263007 0.7082488347906791 0.8326954295458898 0.0696637231782199 0.14435177171284336 353.5661948421479 1157267.941774402 0.061867194726690375 0.04161799610227655 1.0176439133343215e-07 6.992404160631108 0.1244465947552107 DKTESVTSGPMS(ph)PEGS(ph)PS(ph)KSPSKK ddPTM_KYSE-520_SHP099_60min_R1 1 DKTESVTSGPMSPEGSPSKSPSKK 24 3 P35612 P35612 ADD2 Beta-adducin 3 DKTESVTS(0.001)GPMS(0.998)PEGS(0.982)PS(0.559)KS(0.37)PS(0.089)KK 70.632 0.010926 705990000.0 348610.0 328770.0 297910.0 314460.0 297520.0 290950.0 338670.0 357490.0 366980.0 299670.0 True False 329271.90836319403 312975.39570616913 317113.75527285336 344346.18385415385 320933.1313427643 289134.0731275774 372906.0687006812 356249.95062879287 300345.6828129658 297015.15693973174 1.1086030482612967 1.0537354353591992 1.0676685948966567 1.1593555945160947 1.0805277907345512 0.9734657184052276 1.2555119157651229 1.1994335720081808 1.0112133195744952 1.0 18.180177029314148 -6.74927485627524 24.999998549436814 1.1331592031580278 1.0768798536286155 0.043153200174688044 0.08432176122634331 576.9360576765799 1185694.2903962575 0.03229742090939457 0.024832780449963468 1.7812510925204017e-07 6.74927485627524 -0.05627934952941227 DKTESVTSGPMS(ph)PEGS(ph)PSKS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 3 DKTESVTSGPMSPEGSPSKSPSK 23 2 P35612 P35612 ADD2 Beta-adducin 3 DKT(0.004)ES(0.014)VT(0.014)S(0.049)GPMS(0.92)PEGS(0.894)PS(0.182)KS(0.908)PS(0.014)K;DKTES(0.006)VT(0.007)S(0.001)GPMS(0.986)PEGS(0.983)PS(0.019)KS(0.868)PS(0.13)K;DKTESVTSGPMS(1)PEGS(0.959)PS(0.041)KS(0.996)PS(0.004)K 143.64 4.6711999999999996e-07 3185060000.0 3510420.0 2954160.0 2564780.0 3288070.0 3045260.0 3248620.0 3201290.0 3286840.0 3443740.0 3088380.0 True False 3315690.00475122 2812237.7193154404 2730109.8225930943 3600567.184205709 3284904.636840767 3228344.1575655965 3524907.634779592 3275438.7191942204 2818443.625620807 3061019.3559232834 1.0831979870807191 0.9187258858306684 0.8918956416626845 1.1762641020999633 1.073140759624486 1.0546630981991434 1.1515469929841027 1.0700483526365232 0.9207532844138749 1.0 21.545580736896117 -5.24904171247793 24.9979629853976 1.0703603770880417 0.9600184489115043 0.23263047458221986 0.0818003462111736 1046.6317797770146 2110366.360632249 0.022279433956509748 0.03822659294315523 5.6358352298468365e-06 5.24904171247793 -0.11034192817653732 DKTESVTSGPMSPEGSPS(ph)KSPSK ddPTM_KYSE-520_SHP099_60min_R1 2 DKTESVTSGPMSPEGSPSKSPSK 23 2 P35612 P35612 ADD2 Beta-adducin 1 DKTESVTSGPMSPEGS(0.063)PS(0.445)KS(0.445)PS(0.047)K;DKTESVTSGPMSPEGS(0.215)PS(0.648)KS(0.133)PS(0.004)K 197.35 1.7721e-15 6824100000.0 1553440.0 1094400.0 1187750.0 1308170.0 1223110.0 1268850.0 1189450.0 1286720.0 1306130.0 1037180.0 True False 1467267.5864941336 1041823.3812721084 1264314.2654671918 1432498.083484348 1319361.7984560626 1260930.636493992 1309691.2139133245 1282256.6686427067 1068969.7168578638 1027991.3921138308 1.4273150512253134 1.0134553550393406 1.229887988524317 1.3934922942678936 1.2834366207513612 1.2265964930904476 1.274029358572976 1.2473418342599514 1.039862517389149 1.0 19.97139675349927 -7.790540566988666 4.130420459344284 1.0035901108583398 1.2580989762528156 0.4627077879144095 0.10469479767660071 0.18870311339722554 6.667364926985858 0.09538381997271114 0.026611252214938815 1.6197926837138133e-08 7.790540566988666 0.2545088653944758 DKTESVTSGPMSPEGSPSKS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 2 DKTESVTSGPMSPEGSPSKSPSK 23 2 P35612 P35612 ADD2 Beta-adducin 1 DKTESVTSGPMSPEGS(0.007)PS(0.148)KS(0.696)PS(0.148)K;DKTESVTSGPMSPEGS(0.324)PS(0.093)KS(0.583)PSK 216.43 5.1131000000000005e-21 1593400000.0 404630.0 365329.0 320195.0 322908.0 336009.0 405231.0 351456.0 356415.0 381375.0 394390.0 True False 382184.36729009287 347778.0464699914 340835.28203011403 353597.0792341701 362450.9966703102 402701.80301619275 386984.6023600156 355178.67955288617 312126.9136813856 390896.01143077674 0.9777136530280852 0.8896945384452432 0.8719333839774216 0.904580934299935 0.927231248391738 1.0302018727236533 0.9899937350180567 0.9086270239822702 0.7984909146013626 1.0 18.57642533837229 -4.229387493098777 21.708796221175547 0.924838416919944 0.9777142073267128 0.05755539546531829 0.06455429110410656 7481.67399726447 5066840.577510106 0.017026638323555703 1.6918309631772552 5.896747164747045e-05 4.229387493098777 0.05287579040676882 DKTIIMWK ddPTM_KYSE-520_SHP099_60min_R1 2 DKTIIMWK 8 1 P63244;D6REE5;D6RAC2;D6RHH4;D6RBD0;E9PD14;D6RAU2;D6R909;D6RGK8 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 ; 96.948 0.0056166 326980000.0 1322850.0 1102880.0 743710.0 619440.0 1086000.0 1082730.0 736510.0 701310.0 810100.0 817590.0 False True 1249468.873463904 1049895.9893433715 791650.7365780734 678311.3913585733 1171462.0215052476 1075972.2804516985 810963.6184449132 698877.3192969853 663006.2609591365 810346.7886753951 1.5418940272550528 1.2956131918034093 0.9769283319702142 0.8370630955018051 1.4456304854618316 1.3277923667847178 1.0007611923415238 0.8624422643043734 0.8181759590149008 1.0 19.62817991728941 -6.943206026135995 4.771677529155759 0.8878162606364322 1.2185746190240676 0.3837102287611678 0.1991815233075779 0.24251030713557462 11.421781001727435 0.09536435353495362 0.062150929791379116 1.1397089896603639e-07 6.943206026135995 0.33075835838763545 DKVNCSFYFK ddPTM_KYSE-520_SHP099_60min_R1 1 DKVNCSFYFK 10 1 P0DN76;Q01081-2;Q01081;A0A1B0GW87;M0QYK5;M0R2N4;Q01081-3;Q8WU68-3;Q8WU68-2;Q8WU68 P0DN76 U2AF1;U2AF1L4 Splicing factor U2AF 35 kDa subunit;Splicing factor U2AF 26 kDa subunit 0 80.52199999999999 0.011196 733630000.0 1247400.0 1076800.0 861780.0 1070900.0 1250500.0 1051700.0 818860.0 909940.0 990660.0 964690.0 False True 1178204.2353697484 1025068.9116902484 917331.7176967523 1172678.0140221745 1348907.2356282803 1045135.9501916924 901638.360103464 906783.6305215929 810781.1165063302 956143.5971174625 1.232246117551531 1.0720867815049735 0.9594078969542665 1.2264664194348107 1.4107789245202325 1.093074255104066 0.9429947162975117 0.9483759900242205 0.8479700318557124 1.0 19.86686777809465 -6.679198617847102 4.010352638096513 0.9290060620116246 1.1713700196557963 0.5010806078205192 0.11492162406488422 0.2113683361949073 6.481650744834885 0.0512012009339237 0.03803433808002696 2.09315496495414e-07 6.679198617847102 0.24236395764417173 DKVS(ph)PLQNLASINNK ddPTM_KYSE-520_SHP099_60min_R1 1 DKVSPLQNLASINNK 15 1 Q03112-8;Q03112;Q03112-3;E7EUL6;A0A0C3SFZ7;Q03112-5;Q03112-6;Q03112-1;Q03112-4 Q03112-8 MECOM MDS1 and EVI1 complex locus protein EVI1 1 DKVS(0.999)PLQNLAS(0.001)INNK 177.84 1.9704e-06 0.0 250900.0 253650.0 217530.0 203700.0 215960.0 230900.0 236530.0 267950.0 315920.0 263340.0 True False 236982.07684325008 241464.2732635878 231552.3318603058 223059.586755362 232954.82335568446 229458.86745199375 260440.760710344 267020.5439900004 258556.89169511173 261007.0124754197 0.9079529112865036 0.9251256162564891 0.8871498495930725 0.8546114705495454 0.8925232358560594 0.8791291286612577 0.9978305112965921 1.0230397316054756 0.9906128162723646 1.0 17.993729042640425 -6.777736874591305 9.299384139088202 1.0049826666577668 0.8908370499400483 0.8943325530807819 0.018819265671333244 0.07095870118333705 35.321939279025266 0.008474636693698443 0.005877680238275755 1.668257651424064e-07 6.777736874591305 -0.1141456167177185 DKVS(ph)PLQNLASINNKK ddPTM_KYSE-520_SHP099_60min_R1 1 DKVSPLQNLASINNKK 16 2 Q03112-8;Q03112;Q03112-3;E7EUL6;A0A0C3SFZ7;Q03112-5;Q03112-6;Q03112-1;Q03112-4 Q03112-8 MECOM MDS1 and EVI1 complex locus protein EVI1 1 DKVS(1)PLQNLASINNKK 159.14 4.3908e-08 511430000.0 788440.0 775680.0 595050.0 662630.0 656230.0 573330.0 659270.0 678580.0 869590.0 657890.0 True False 744703.6614838268 738415.1684805821 633407.8751136626 725606.1559730251 707871.5675620537 569751.6348040353 725915.4454551575 676226.1643617627 711694.3765799957 652061.6064306754 1.1420756169961692 1.1324316003246964 0.971392685701706 1.1127877317373827 1.0855900126322064 0.8737696395326858 1.1132620572904932 1.0370587037984982 1.0914526626950858 1.0 19.31464875038589 -4.6640007603830504 8.89805373971434 1.0385891340606626 1.1390768123367039 0.2504413279864608 0.07020119331477293 0.37411872708558735 30.663312153867224 0.017586709290992514 0.046712937136078256 2.167700309505489e-05 4.6640007603830504 0.10048767827604133 DKWDQYK ddPTM_KYSE-520_SHP099_60min_R1 2 DKWDQYK 7 1 J3QK89;Q8IWX8 J3QK89 CHERP Calcium homeostasis endoplasmic reticulum protein 0 ; 105.78 0.0042604 3837100000.0 7760100.0 7762300.0 5213300.0 4840800.0 7910100.0 8057300.0 6155400.0 6626000.0 6256800.0 6493500.0 False True 7329631.783624172 7389387.456550159 5549357.65957493 5300868.176560414 8532579.867687538 8007011.401996321 6777647.902914846 6603015.952520033 5120722.841092604 6435972.64186656 1.13885378193566 1.1481384194335371 0.8622407161080637 0.8236312476031683 1.325763849924154 1.2441027716479118 1.0530883644261722 1.0259546334250773 0.7956408651866943 1.0 22.617726762767862 -7.576209098437075 6.105521056695648 0.8980657807621657 1.0814229661935908 0.19183852756841635 0.1517245720476766 0.365145243682267 29.212916421183113 0.11434770509081323 0.04223202171920296 2.6533277647808587e-08 7.576209098437075 0.1833571854314251 DKWLAPDGLIFPDR ddPTM_KYSE-520_SHP099_60min_R1 3 DKWLAPDGLIFPDR 14 1 E9PNR9;E9PQ98;E9PIX6;H0YDE4;E9PKG1;Q99873-2;Q99873-3;Q99873 E9PNR9 PRMT1 Protein arginine N-methyltransferase 1 0 ;; 171.46 2.4041e-08 3872440000.0 1906160.0 1557990.0 1142580.0 935320.0 1689470.0 1552850.0 1150750.0 1003870.0 1096990.0 1244870.0 False True 1800421.5049642457 1483141.821809335 1216232.5349926385 1024212.531585789 1822421.677230637 1543158.0871495397 1267079.0402377222 1000387.8092750184 897804.2688675001 1233841.4202942033 1.4592000846712896 1.2020522227691848 0.9857284047917876 0.8301006229322166 1.4770307166346301 1.250694020939564 1.0269383239992005 0.8107912352597799 0.727649642896105 1.0 20.23472555306868 -7.050195040462136 3.4225905929544957 0.8299640405266849 1.185631205784646 0.4027147665777935 0.19283103286340125 0.2700988390855713 6.326589904081969 0.10334447453097666 0.05853712748023494 8.90850769642894e-08 7.050195040462136 0.35566716525796116 DLADAPAEELQEKGS(ph)PAGPPPSQGQPAARPPK ddPTM_KYSE-520_SHP099_60min_R1 2 DLADAPAEELQEKGSPAGPPPSQGQPAARPPK 32 2 Q96RY5 Q96RY5 CRAMP1L Protein cramped-like 1 DLADAPAEELQEKGS(1)PAGPPPSQGQPAARPPK;DLADAPAEELQEKGS(1)PAGPPPSQGQPAARPPK 182.53 1.0877e-11 2095000000.0 874570.0 778900.0 790560.0 605940.0 724690.0 741580.0 704310.0 812990.0 905620.0 781950.0 True False 826055.8586879275 741480.4748472647 841520.762540724 663528.355417496 781718.9800779363 736951.5241448659 775508.5282031982 810169.9274432928 741182.2368223827 775022.5313478946 1.0658475402660583 0.956721185328258 1.0858016747941222 0.8561407295649953 1.008640327808787 0.9508775478606838 1.0006270744857682 1.0453501603808486 0.9563363732578742 1.0 19.563878727264157 -9.963606091857994 13.825762840712112 1.0000107098370277 0.9906816303931748 0.0012123003618038641 0.06334535445416924 0.0 0.0 0.0577936474571091 0.014017018409139433 1.0874114662953516e-10 9.963606091857994 -0.009329079443852861 DLADELALVDVIEDK ddPTM_KYSE-520_SHP099_60min_R1 13 DLADELALVDVIEDK 15 0 P00338;P00338-3;P00338-5;P00338-2;P00338-4;F5GYU2;F5GXY2;F5GXH2;F5GZQ4;F5H5J4;F5H6W8 P00338 LDHA L-lactate dehydrogenase A chain 0 ;;;;;;;;;;;; 297.9 1.6111e-32 3232960000.0 2713935.0 2713528.0 10469440.0 1372046.0 3318091.0 2388917.0 2369288.0 1859865.0 5651084.0 3017307.0 False True 2563387.6154547064 2583166.0417914367 11144316.85409628 1502444.83931933 3579205.884344722 2374006.88287923 2608798.7530625663 1853413.5624107555 4624989.597834836 2990576.0074093277 0.8571551464011492 0.863768730636336 3.726478386265917 0.502393129483061 1.1968282616716743 0.793829308132443 0.8723398925822698 0.6197513648938581 1.5465213344774225 1.0 21.51199195441615 DLAEDAPWK ddPTM_KYSE-520_SHP099_60min_R1 4 DLAEDAPWK 9 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;O75369-5;O75369-4;Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98;Q14315;Q14315-2 O75369-2;Q60FE5;Q14315 FLNB;FLNA;FLNC Filamin-B;Filamin-A;Filamin-C 0 ;;; 149.94 0.0021016 2999270000.0 6495280.0 7746760.0 5559880.0 4380840.0 7197300.0 8475260.0 6140210.0 7415260.0 6616160.0 8098300.0 False True 6134973.870380327 7374594.0214761775 5918278.760922529 4797193.7164524235 7763686.562964755 8422362.758601932 6760922.349474732 7389538.193794688 5414832.12382101 8026555.362382056 0.7643345860583013 0.9187744541124806 0.7373373126733346 0.5976653121880108 0.9672501107200625 1.049312236488756 0.8423192819626026 0.9206362954184721 0.6746146857964286 1.0 22.93634954986713 -5.795840132989061 24.999367816316987 0.9087332958932668 0.7650314590716001 0.2840149707331313 0.11970639929334265 269.6501877467842 195956.07001648334 0.03852460228158269 0.043684875230695 1.600146946141532e-06 5.795840132989061 -0.1437018368216667 DLAEDAPWKK ddPTM_KYSE-520_SHP099_60min_R1 6 DLAEDAPWKK 10 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;O75369-5;O75369-4;Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98;Q14315;Q14315-2 O75369-2;Q60FE5;Q14315 FLNB;FLNA;FLNC Filamin-B;Filamin-A;Filamin-C 0 ;;;;; 151.15 0.00036129 9738190000.0 15712570.0 14153170.0 10147510.0 8892920.0 15049570.0 14160970.0 10597010.0 11986340.0 12256720.0 11958160.0 False True 14840962.419868238 13473230.468858732 10801634.731190067 9738100.443046104 16233885.538660003 14072586.133484889 11668259.187651128 11944762.184172774 10031208.614767382 11852220.005707696 1.2521673081263467 1.1367685093906799 0.9113596208970389 0.8216267027068775 1.3696915456211765 1.1873375727676272 0.9844787881115962 1.0078080037681136 0.8463569365010634 1.0 23.49865397576154 -6.910535498699762 6.568710183002287 0.9551104507654713 1.1032159259677676 0.19481905506788222 0.15303242912994602 0.4292186891711765 25.99944686210633 0.07024106096464311 0.04710829607100111 1.228752745727067e-07 6.910535498699762 0.14810547520229633 DLAQYDAAHHEEFKR ddPTM_KYSE-520_SHP099_60min_R1 6 DLAQYDAAHHEEFKR 15 1 C9JKZ2;H7BZI1;Q02818 C9JKZ2 NUCB1 Nucleobindin-1 0 ;;;;; 144.12 9.6734e-06 6861770000.0 5861280.0 5580690.0 4002490.0 4176050.0 6845660.0 5960480.0 5501730.0 4907410.0 5440400.0 4216710.0 False True 5536143.114227991 5312585.275613532 4260496.909610423 4572940.536424789 7384374.495522673 5923278.433392209 6057898.560110427 4890387.340108111 4452560.501323392 4179353.2299507423 1.324641113020552 1.2711500998627356 1.019415367688516 1.0941742142428783 1.766870156512161 1.4172715507614608 1.4494823066634703 1.170130178292144 1.0653707060256952 1.0 21.994848266621094 -7.561810413799335 3.2239658073531654 1.0331993236484902 1.3305302649724258 0.2855542802096874 0.1928850126531005 0.3775041235138874 7.818020049180068 0.1667023780967416 0.056744751873571975 2.7427712354823842e-08 7.561810413799335 0.29733094132393556 DLDAPDDVDFF ddPTM_KYSE-520_SHP099_60min_R1 2 DLDAPDDVDFF 11 0 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 0 ; 128.69 0.0012223 48015000.0 60151.0 61595.0 385600.0 27685.0 105101.0 56619.0 58975.0 38425.0 201407.0 97330.0 False True 56814.30412195426 58635.8837440201 410456.39298181405 30316.174076201245 113371.85075711146 56265.619819248364 64936.7685405341 38291.71264346244 164836.5658572974 96467.73192159424 0.5889461998353089 0.607828986709021 4.254856881215154 0.31426232868044646 1.1752308103320634 0.5832584502450953 0.6731449703131047 0.3969380421899487 1.7087223113244858 1.0 16.557758826782763 DLDDALDKLS(ph)DSLGQR ddPTM_KYSE-520_SHP099_60min_R1 2 DLDDALDKLSDSLGQR 16 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;A0A0C4DGD1;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 1 DLDDALDKLS(0.988)DS(0.012)LGQR;DLDDALDKLS(0.996)DS(0.004)LGQR 125.88 8.0945e-05 144280000.0 292040.0 219617.0 200166.0 257970.0 240179.0 259510.0 233440.0 268425.0 268060.0 278567.0 True False 275839.95903269306 209066.26966816216 213069.02063692384 282487.3912384913 259079.72086842463 257890.3018296531 257038.3933548499 267493.89632586594 219387.0612426936 276099.1131018463 0.9990613730473751 0.757214564434485 0.7717120791993556 1.0231376264301453 0.9383576714817493 0.934049729216347 0.9309642123335421 0.9688328706336478 0.7945953131756964 1.0 18.07482672807948 -5.254188991820294 24.826876242290037 0.9392506984761831 0.8341178658621505 0.22509775679533162 0.08345014312579123 732.1754895403184 2507116.6417534626 0.02222076943123715 0.037492716406634506 5.5694333130015344e-06 5.254188991820294 -0.10513283261403261 DLDDFQSWLSR ddPTM_KYSE-520_SHP099_60min_R1 4 DLDDFQSWLSR 11 0 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ;;; 229.53 1.3179000000000002e-09 763264000.0 646472.0 802569.0 724820.0 421361.0 712538.0 709856.0 552314.0 636751.0 713679.0 669456.0 False True 610610.909450018 764012.3805593717 771543.0569530041 461407.0227531962 768610.6868133579 705425.5253962869 608147.289185189 634542.2593998011 584092.8839835268 663525.1406688873 0.9202528616089399 1.151444510134439 1.1627940068332994 0.6953874005257139 1.1583746262252186 1.0631481494207748 0.9165399348276797 0.9563198445806153 0.8802874950521298 1.0 19.33979160413354 -6.7678014195598815 24.699563594397155 0.9346467904900012 1.028282056175608 0.09019581693187617 0.1348758322935266 337.3162556489886 1309556.0367074127 0.055821640716019284 0.03867534566933328 1.7068626707572103e-07 6.7678014195598815 0.09363526568560687 DLDEDELLGNLS(ph)ETELK ddPTM_KYSE-520_SHP099_60min_R1 8 DLDEDELLGNLSETELK 17 0 H0YNU8;Q9NYL9 H0YNU8 TMOD3 Tropomodulin-3 1 DLDEDELLGNLS(0.964)ET(0.036)ELK;DLDEDELLGNLS(0.975)ET(0.025)ELK;DLDEDELLGNLS(0.994)ET(0.006)ELK;DLDEDELLGNLS(0.971)ET(0.029)ELK;DLDEDELLGNLS(0.989)ET(0.011)ELK;DLDEDELLGNLS(0.963)ET(0.037)ELK;DLDEDELLGNLS(0.869)ET(0.131)ELK;DLDEDELLGNLS(0.916)ET(0.084)ELK 336.47 9.706100000000001e-59 2816543000.0 4316200.0 3939200.0 3101520.0 3159590.0 3533410.0 3916600.0 3377300.0 4095580.0 4253520.0 3839660.0 True False 4076771.78186862 3749954.9191402565 3301448.9418074563 3459876.483634628 3811469.2646472002 3892155.0466109924 3718710.4432716556 4081373.388895557 3481187.990513399 3805643.599610273 1.0712437134906991 0.9853668166730801 0.8675139579926902 0.9091435897962031 1.0015307962725475 1.0227324090489134 0.9771567793821997 1.0724528669246698 0.9147435642344174 1.0 21.859709028164026 -5.859497390243906 15.086973223865833 1.0019459411165874 0.9537665245628356 0.08744761258059264 0.06152728348740172 2.1736676851870573 324.3176823541989 0.019749119337017215 0.02239446584634532 1.3819827104667791e-06 5.859497390243906 -0.0481794165537518 DLDEEGS(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 3 DLDEEGSEK 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 DLDEEGS(1)EK;DLDEEGS(1)EK;DLDEEGS(1)EK 134.98 0.00058249 7229710000.0 11032570.0 8724730.0 7658340.0 8712780.0 9074200.0 9123240.0 10277000.0 9808920.0 9671340.0 8640440.0 True False 10420571.349216959 8305580.874713284 8152008.850177248 9540839.991607172 9788287.914864566 9066298.475065963 11315899.453854486 9774895.14593913 7915268.450641318 8563892.423760591 1.2168031583751562 0.9698371328987483 0.9519046301375098 1.1140775151654208 1.1429718439370957 1.058665619141997 1.3213500233209876 1.1414079792523553 0.9242606117611123 1.0 23.02983524259525 -4.215329729633009 21.989444734789316 1.081368882283169 1.2168055841092578 0.12567437175856755 0.11272980595932998 17128.17053986684 8167415.869281606 0.029536361422811182 12.258076712760776 6.090742938474719e-05 4.215329729633009 0.1354367018260887 DLDEEGS(ph)EKELHENVLDK ddPTM_KYSE-520_SHP099_60min_R1 13 DLDEEGSEKELHENVLDK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK;DLDEEGS(1)EKELHENVLDK 247.64 4.7357e-24 49752200000.0 20420000.0 16128720.0 14473130.0 16907460.0 16820080.0 17025560.0 18224360.0 18646600.0 18545200.0 17567560.0 True False 19287261.893739194 15353872.0814977 15406091.117626753 18514339.914986797 18143724.602836095 16919297.16472917 20066656.16141363 18581919.296749137 15177859.166447813 17411925.085754868 1.1077041624489061 0.8818020986122372 0.8848011372522423 1.0633137820087362 1.0420286391927984 0.9717074408142998 1.152466258761397 1.0671949945357548 0.87169334187322 1.0 24.053572382314538 -5.276777992758382 24.84458848618457 1.0307754463475682 0.9504724228078478 0.09663327974693159 0.08989652097464451 1449.7114071147514 2348154.360666718 0.025368763042457915 0.03779370993560107 5.2871545705936415e-06 5.276777992758382 -0.08030302353972041 DLDEEIFDDDDFYHQLLR ddPTM_KYSE-520_SHP099_60min_R1 1 DLDEEIFDDDDFYHQLLR 18 0 Q9NY61;A0A087WTH8;A0A087WWS8 Q9NY61 AATF Protein AATF 0 157.12 1.0512e-06 33588000.0 12822.0 14659.0 11964.0 9876.4 15981.0 13569.0 13122.0 11979.0 14173.0 14868.0 False True 12110.73809997669 13954.759636392413 12735.218583076823 10815.050086552066 17238.613780548232 13484.310837835006 14448.499818378767 11937.447644919625 11599.540472255072 14736.281087128971 0.821831371726107 0.9469661683218599 0.8642084463358991 0.733906337875042 1.1698076114742992 0.9150416416535739 0.980471241892803 0.81007192889026 0.7871416406671555 1.0 13.847084865034022 -1.0305608659267267 22.451555174659696 0.9030225706378382 0.0045263191721085505 0.0 0.12141652823505915 0.0 0.0 0.02770045992735279 0.0 0.09320498353580535 1.0305608659267267 -0.8984962514657296 DLDELSRYPEDK ddPTM_KYSE-520_SHP099_60min_R1 7 DLDELSRYPEDK 12 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 0 ;;;;;; 166.62 3.0459e-06 4534660000.0 7990750.0 8071350.0 5965190.0 4579470.0 7685100.0 7525800.0 5489730.0 5890270.0 6906610.0 6365620.0 False True 7547487.168334789 7683590.2306566555 6349715.692041461 5014701.451932144 8289873.64776242 7478828.690646243 6044685.483001715 5869838.028169357 5652543.725469662 6309225.559177413 1.1962620606195 1.2178341317152768 1.0064176074360112 0.794820442682977 1.3139288760573715 1.1853798252255419 0.9580709116048486 0.9303579295292556 0.8959172044891405 1.0 22.589031498382536 -6.849328243952865 6.842386004932679 0.9375643254485877 1.1122807429401016 0.2820371747307143 0.13492723421420955 0.32967524408064114 21.412202961366596 0.06123790297236834 0.041222911748928684 1.4147241136631927e-07 6.849328243952865 0.1747164174915139 DLDEMDDDDDDDDVGDHDDDHPGMEVVLHEDKK ddPTM_KYSE-520_SHP099_60min_R1 8 DLDEMDDDDDDDDVGDHDDDHPGMEVVLHEDKK 33 1 Q15029-3;Q15029;K7EIV5;K7EIT3 Q15029-3 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component 0 ;;;;;;; 259.67 1.0939e-41 17694040000.0 3730715.0 5728802.0 3672708.0 3276278.0 3914975.0 5024627.0 3987551.0 4633587.0 5156264.0 4641555.0 False True 3523764.8019540273 5453581.752812883 3909456.634220574 3587654.476071101 4223061.259339325 4993266.439102255 4390651.569827468 4617514.16818434 4220016.436437719 4600434.433775147 0.7659634872923082 1.1854492942610286 0.8498016199336305 0.7798512352945433 0.9179701004615455 1.0853901975959142 0.9543993362001836 1.0037126351119794 0.9173082449464984 1.0 22.13333867524574 -6.030809322945793 24.172938935710388 0.9913279916600765 0.9047668161732629 0.13880762565080673 0.11514904383589511 1048.0085951545398 822263.5326811976 0.03819630366722249 0.03824758256660875 9.315167682689763e-07 6.030809322945793 -0.08656117548681352 DLDENEVERPEEENAS(ph)ANPPSGIEDETAENGVPKPK ddPTM_KYSE-520_SHP099_60min_R1 1 DLDENEVERPEEENASANPPSGIEDETAENGVPKPK 36 2 Q6UN15;A0A0B4J203 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DLDENEVERPEEENAS(1)ANPPSGIEDETAENGVPKPK 250.28 9.4334e-32 478200000.0 243900.0 187130.0 183560.0 188650.0 199400.0 188790.0 203090.0 209960.0 253430.0 205640.0 True False 230370.380797404 178139.99391214357 195392.5713063841 206579.2392803091 215091.64556919588 187611.69158190538 223620.31916739437 209231.69776503218 207413.5004504058 203818.1895854991 1.1302739037467833 0.8740142097936561 0.958661107253234 1.0135466304573948 1.0553113341190175 0.9204855168395297 1.0971558506243553 1.0265604762290472 1.0176397939370299 1.0 17.636923283809953 -5.374651444665006 6.0935602747132664 1.02094877202379 0.9765533716728804 0.030822825313646662 0.07214000396141923 0.6664315210081606 31.306522204694627 0.0197868004900314 0.029525886196240633 4.220350837496342e-06 5.374651444665006 -0.04439540035090961 DLDENEVERPEEENASANPPS(ph)GIEDETAENGVPKPK ddPTM_KYSE-520_SHP099_60min_R1 3 DLDENEVERPEEENASANPPSGIEDETAENGVPKPK 36 2 Q6UN15;A0A0B4J203 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 DLDENEVERPEEENASANPPS(1)GIEDETAENGVPKPK;DLDENEVERPEEENASANPPS(1)GIEDETAENGVPKPK;DLDENEVERPEEENASANPPS(1)GIEDETAENGVPKPK 260.97 1.1198e-41 3291130000.0 870230.0 824860.0 782340.0 820290.0 804290.0 774570.0 856680.0 869400.0 992640.0 815760.0 True False 821956.6071395034 785232.4874598978 832770.8881882586 898250.1149708177 867583.0472158897 769735.6213178477 943281.5747910938 866384.254319486 812401.5984180671 808533.0010516765 1.0166024220042553 0.9711817408052965 1.0299776101965603 1.1109628349151417 1.0730335633640253 0.952015094395202 1.1666580999961003 1.0715508868439025 1.004784711769784 1.0 19.624947134322454 -4.993742931952989 11.574300322613139 1.0592783255850144 0.9955225636616832 0.14213718167193257 0.05793725830084304 0.45931719705592783 790.4092914559827 0.01512773169404409 0.030557570907048213 1.0145117188890934e-05 4.993742931952989 -0.06375576192333121 DLDFDWHK ddPTM_KYSE-520_SHP099_60min_R1 3 DLDFDWHK 8 0 Q03001;F8W9J4;Q03001-14;F6QMI7;E9PHM6;Q03001-8;A0A494C1D7;E7ETB9;Q03001-9;Q03001-3;Q6P0N6 Q03001 DST Dystonin 0 ;; 112.84 0.0017838 595410000.0 816440.0 777920.0 540352.0 483663.0 831630.0 836170.0 599142.0 659941.0 656860.0 709930.0 False True 771150.4456672106 740547.5555182747 575183.9545137689 529630.1861014164 897074.5496725698 830951.1528684874 659709.1204224274 657651.8187023875 537590.7820930969 703640.5725171829 1.0959436902686266 1.0524514708824446 0.8174400069855592 0.752699896492229 1.2749045247112485 1.1809312670755574 0.9375654932210682 0.9346416968960778 0.7640133373349061 1.0 19.424479146674983 -6.987230573401005 24.964067366333612 0.8968171850101038 1.0224627239294695 0.12858558656625196 0.15480906491644067 531.2590896014609 1038602.1664012247 0.07112780828979101 0.04792245567821062 1.0298392183143383e-07 6.987230573401005 0.1256455389193657 DLDIIDNYDY(ph)SHTVK ddPTM_KYSE-520_SHP099_60min_R1 2 DLDIIDNYDYSHTVK 15 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 1 DLDIIDNYDY(0.541)S(0.459)HTVK;DLDIIDNYDY(0.922)S(0.078)HTVK 141.34 5.3295e-05 266120000.0 553930.0 508800.0 461680.0 442730.0 539870.0 520510.0 469160.0 532060.0 593030.0 483030.0 True False 523202.398667921 484356.48427562934 491440.6315141183 484806.9260883718 582354.6975598877 517261.3040166192 516587.27136035525 530214.4080437375 485350.70106973953 478750.7299916531 1.092849296912911 1.011709129475529 1.0265062813015167 1.0126499986680422 1.2164048242183167 1.0804397186519956 1.0790318196890516 1.1074957693599374 1.0137858193515474 1.0 18.868915161275 -3.9064317027425144 19.745849128050622 1.0667987296183605 2.928430195584269 0.01518779530397274 0.06263930680787155 2607.46603149403 583458.2167608689 0.015497405242182042 13129.433636622322 0.00012404186783291385 3.9064317027425144 1.8616314659659083 DLDIIDNYDYSHTVK ddPTM_KYSE-520_SHP099_60min_R1 5 DLDIIDNYDYSHTVK 15 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 ;;;; 291.54 6.4767e-33 4829640000.0 5565850.0 4598110.0 3121520.0 3392460.0 5233930.0 5021030.0 4031430.0 4024860.0 3806190.0 4066430.0 False True 5257101.205253107 4377209.893696177 3322738.173808592 3714878.3784197057 5645810.5140119465 4989691.889313485 4438966.28736524 4010898.7000693837 3115081.8422417645 4030404.5938346717 1.304360662275673 1.086047266915092 0.8244180196924645 0.9217135133535656 1.4008049024776243 1.2380126543489551 1.101369895755763 0.9951603137324907 0.77289556661555 1.0 21.942493240886378 -7.444527475317968 3.4551686339739835 0.884425616589966 1.118809058430487 0.246743863992679 0.16797755710246434 0.38750672192018604 8.74137155173909 0.12256900038445843 0.04937239182065653 3.593126643873732e-08 7.444527475317968 0.23438344184052107 DLDKELDEYMHGGK ddPTM_KYSE-520_SHP099_60min_R1 1 DLDKELDEYMHGGK 14 1 Q9H814 Q9H814 PHAX Phosphorylated adapter RNA export protein 0 142.97 5.0112e-06 854880000.0 836190.0 664430.0 471340.0 448410.0 770090.0 685600.0 526190.0 595630.0 552850.0 665460.0 False True 789804.8737965605 632509.7854702376 501723.33057066426 491026.75158061803 830691.7017872724 681320.9160895932 579382.4203195192 593563.8985510871 452466.3762143664 659564.5421200466 1.1974641196718683 0.9589808806840244 0.7606887552777908 0.7444711172651953 1.2594547595253827 1.0329859666191497 0.878431727783915 0.8999330022247516 0.6860077328596199 1.0 19.331154316689183 -6.893924220366763 5.572745466195924 0.8531326210142139 0.9808266455935178 0.11616702443889149 0.16849056292575518 0.5301275680005948 24.13436101529947 0.07639862307190014 0.05103698150935981 1.276661552844015e-07 6.893924220366763 0.1276940245793039 DLDKPR ddPTM_KYSE-520_SHP099_60min_R1 1 DLDKPR 6 1 Q8NAV1;Q8NAV1-2 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A 0 99.919 0.013387 295080000.0 714800.0 574540.0 422020.0 457440.0 743010.0 645510.0 523000.0 582110.0 644830.0 610220.0 False True 675148.6190815273 546938.2359978784 449224.0844558747 500914.9600656491 801480.6598513958 641481.1326502238 575869.9439881194 580090.7962754952 527745.1268414764 604813.9255439757 1.1162914585246893 0.9043082721780201 0.7427475881145397 0.8282133378710175 1.3251689916539804 1.0606255999698904 0.9521439895256648 0.9591227512722293 0.8725743646970714 1.0 19.206131831723887 -4.246391833681506 23.025835765400775 0.962585534359276 1.1162917847191303 0.0899543203116856 0.14848647897686765 2650.0750828752944 4054952.425785526 0.04032016047007056 0.811497312035928 5.670327803423996e-05 4.246391833681506 0.1537062503598543 DLDLEPLS(ph)DLEEGLEETR ddPTM_KYSE-520_SHP099_60min_R1 9 DLDLEPLSDLEEGLEETR 18 0 P29375-2;P29375 P29375-2 KDM5A Lysine-specific demethylase 5A 1 DLDLEPLS(1)DLEEGLEETR;DLDLEPLS(1)DLEEGLEETR;DLDLEPLS(1)DLEEGLEETR;DLDLEPLS(0.999)DLEEGLEET(0.001)R;DLDLEPLS(1)DLEEGLEETR;DLDLEPLS(1)DLEEGLEETR;DLDLEPLS(1)DLEEGLEETR;DLDLEPLS(1)DLEEGLEETR;DLDLEPLS(1)DLEEGLEETR 260.65 8.9232e-30 2480322000.0 921962.0 1007821.0 835395.0 756288.2 723063.4 774510.0 713783.9 816845.1 996699.0 938621.0 True False 870818.9299743179 959403.7663898375 889245.8983792606 828165.6031416614 779964.3759120239 769675.9958001034 785940.142471552 814011.6550011801 815723.5863371313 930305.5481760883 0.9360569026827832 1.031278130363511 0.9558643395416406 0.8902081738256022 0.838395919965418 0.8273367790927322 0.8448193650058606 0.8749938733538586 0.8768340551514492 1.0 19.827345105109643 -5.24475965402594 3.0349940234270694 0.866796086861155 0.9850705572401333 0.42425232389835965 0.05059321681706942 0.20427413702956546 3.827006375747566 0.013864048267947878 0.024671261750323994 5.6916783088620286e-06 5.24475965402594 0.11827447037897831 DLDLLASVPS(ph)PSSSGSR ddPTM_KYSE-520_SHP099_60min_R1 10 DLDLLASVPSPSSSGSR 17 0 A0A087WV97;Q8WU79-3;Q8WU79-2;Q8WU79 A0A087WV97 SMAP2 Stromal membrane-associated protein 2 1 DLDLLAS(0.02)VPS(0.97)PS(0.009)SSGSR;DLDLLASVPS(0.985)PS(0.015)SSGSR;DLDLLAS(0.004)VPS(0.987)PS(0.007)S(0.001)S(0.001)GS(0.001)R;DLDLLAS(0.019)VPS(0.97)PS(0.006)S(0.004)S(0.001)GSR;DLDLLAS(0.002)VPS(0.976)PS(0.016)S(0.004)S(0.001)GS(0.001)R;DLDLLAS(0.002)VPS(0.879)PS(0.106)S(0.01)S(0.002)GS(0.001)R;DLDLLAS(0.001)VPS(0.83)PS(0.129)S(0.028)S(0.006)GS(0.006)R;DLDLLASVPS(1)PSSSGSR;DLDLLAS(0.013)VPS(0.964)PS(0.01)S(0.01)S(0.002)GS(0.002)R;DLDLLASVPS(1)PSSSGSR 298.93 6.280499999999999e-38 6159216000.0 6979820.0 8287470.0 5748210.0 4641060.0 5162930.0 7534270.0 5335190.0 7224850.0 8531760.0 8087380.0 True False 6592635.470673789 7889327.501453924 6118748.814061188 5082144.947014436 5569223.217946675 7487245.826234456 5874523.071636667 7199788.681642661 6982607.45216728 8015732.105086436 0.8224620514064322 0.9842304356014717 0.7633424787460769 0.6340213071479183 0.694786595277141 0.9340688695775368 0.7328741772581133 0.8982072488517908 0.8711128766062953 1.0 22.934402862148502 -7.964554417450059 0.9887211768061965 0.9968625640061063 0.79445518166384 0.27602741231580086 0.100805296665475 0.8096083388526226 1.7870867316390011 0.10317646772164182 0.03491318654585722 1.0850395847766049e-08 7.964554417450059 -0.2024073823422663 DLDRPESQS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 DLDRPESQSPK 11 1 Q8WUA4;A0A087WZD8;Q8WUA4-2 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 DLDRPES(0.063)QS(0.937)PK;DLDRPES(0.023)QS(0.977)PK;DLDRPES(0.001)QS(0.999)PK;DLDRPESQS(1)PK;DLDRPESQS(1)PK;DLDRPESQS(1)PK;DLDRPES(0.001)QS(0.999)PK;DLDRPES(0.015)QS(0.985)PK 165.72 1.8273e-05 9753550000.0 12832460.0 10875070.0 10962610.0 9264830.0 11186610.0 10602630.0 9596050.0 10101370.0 12406230.0 10399190.0 True False 12120617.862925202 10352615.313387131 11669277.381396184 10145356.657627288 12066932.563895788 10536455.053324101 10566112.382422926 10066330.705147488 10153571.367607769 10307061.267047403 1.1759528297048065 1.0044196929812932 1.132163385765825 0.9843112789154461 1.170744235553819 1.0222559835760452 1.0251333632995596 0.9766441126463901 0.9851082771836861 1.0 23.29712971662586 -6.502508971006198 21.350620715250834 0.9989063494520145 1.0858334781913954 0.3722831011444899 0.059822907210152834 131.69165944065767 138033.82898350313 0.019888739275605874 0.01726191906906706 3.1440614742660144e-07 6.502508971006198 0.08692712873938091 DLDT(ph)SDRKEDVLSTSK ddPTM_KYSE-520_SHP099_60min_R1 3 DLDTSDRKEDVLSTSK 16 2 H0YNU5;A0A3B3IT82;P54132;H0YLV8 H0YNU5 BLM Bloom syndrome protein 1 DLDT(0.5)S(0.5)DRKEDVLSTSK;DLDT(0.5)S(0.5)DRKEDVLSTSK;DLDT(0.5)S(0.5)DRKEDVLSTSK 149.33 6.6934e-06 2788060000.0 4853040.0 4431450.0 4275530.0 4170880.0 4469800.0 4202820.0 4215910.0 4287080.0 5631510.0 4349280.0 True False 4583832.196904608 4218556.490257944 4551137.504889871 4567279.181179201 4821547.830316911 4176588.641423082 4642095.326116546 4272209.120091997 4608969.742814445 4310748.762888641 1.0633494200281284 0.9786133969521994 1.055764962242927 1.0595094802320744 1.1184942791901384 0.9688777683773763 1.0768651994011984 0.9910596406989818 1.0691807842046368 1.0 22.0395070517903 -9.186234827565954 12.823271335802302 0.9999999999999879 1.0410096917964082 0.07169306049566548 0.045533978942409827 0.0 0.0 0.04207655293076297 0.010205063064436947 6.512761470172505e-10 9.186234827565954 0.04100969179642033 DLDTS(ph)DRKEDVLSTSK ddPTM_KYSE-520_SHP099_60min_R1 2 DLDTSDRKEDVLSTSK 16 2 H0YNU5;A0A3B3IT82;P54132;H0YLV8 H0YNU5 BLM Bloom syndrome protein 1 DLDT(0.122)S(0.878)DRKEDVLSTSK;DLDT(0.025)S(0.975)DRKEDVLSTSK 150.23 5.8079e-06 1471920000.0 2057840.0 2073380.0 1966410.0 1931760.0 1958890.0 2003510.0 1910180.0 1980700.0 2478540.0 2022240.0 True False 1943687.5129976626 1973771.7125931694 2093167.934967245 2115353.889595177 2113043.49844053 1991005.3509256998 2103279.6359602786 1973829.4139988536 2028499.6149088452 2004324.5268789132 0.9697469082136748 0.9847565532048246 1.0443258598579725 1.0553949029846759 1.0542421998551859 0.9933547807380506 1.0493708018608423 0.9847853416594439 1.0120614639524352 1.0 20.934684688343037 -4.631691881743279 5.520066992157084 1.0255157054782083 0.9734684614728881 0.36680247243008024 0.024898124607441625 0.20451601757360818 8.901637179032837 0.0066406451866086605 0.01834452482513359 2.335114164690257e-05 4.631691881743279 -0.052047244005320126 DLDVAILVGSMPR ddPTM_KYSE-520_SHP099_60min_R1 2 DLDVAILVGSMPR 13 0 A0A5K1VW95;P40925;P40925-3;C9JLV6;C9JRL4;C9JF79 A0A5K1VW95 MDH1 Malate dehydrogenase, cytoplasmic;Malate dehydrogenase 0 ; 140.78 0.00303 8652600.0 65444.0 71694.0 77958.0 75546.0 71871.0 71909.0 66199.0 68410.0 86738.0 60364.0 False True 61813.690860620416 68249.7126251121 82983.29741721028 82725.8691262669 77526.83880994821 71460.18925771088 72891.04095997992 68172.70167701409 70988.56568704302 59829.22192248139 1.0331688909595087 1.1407421061490794 1.387002784771776 1.3827000664232587 1.2958022237092937 1.1944027844837983 1.2183183838563414 1.1394549266467655 1.1865199547308238 1.0 15.868562680451783 -8.133274026565037 0.7478296581348742 1.0030900727361034 1.2492562046177562 0.31529655419927105 0.10236484020114477 1.100435150025304 1.3545346966372485 0.11200260585076581 0.04193424875747065 7.3574271980198916e-09 8.133274026565037 0.24616613188165282 DLEAHIDSANK ddPTM_KYSE-520_SHP099_60min_R1 2 DLEAHIDSANK 11 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 184.24 1.8568000000000002e-06 833700000.0 1425170.0 1921590.0 1073480.0 1746170.0 1624720.0 1585580.0 1105270.0 1353540.0 1492230.0 1381710.0 False True 1346112.9790940406 1829273.9320346045 1142678.238428729 1912125.4717948458 1752576.2206077443 1575683.807078961 1217001.4779956946 1348844.885658611 1221278.648057094 1369469.124354113 0.9829451100103569 1.3357540520655045 0.8343950353518587 1.3962530719315542 1.2797486189652632 1.1505800160497273 0.8886666054407564 0.9849399754045357 0.8917898376373323 1.0 20.38518530915838 -6.717876194086399 7.361484472085435 0.9402297066703894 1.1729367761782734 0.32062886043326444 0.15794783610463764 0.24744234574016907 33.94174067179115 0.05954203727006492 0.04552314027716353 1.9148017067370346e-07 6.717876194086399 0.232707069507884 DLEALMFDR ddPTM_KYSE-520_SHP099_60min_R1 6 DLEALMFDR 9 0 A0A3B3ITK7;P36871;P36871-2;P36871-3 A0A3B3ITK7 PGM1 Phosphoglucomutase-1 0 ;;;;; 134.05 0.0038226999999999996 241003000.0 261320.0 341947.0 408384.0 174954.0 320634.0 335153.0 253602.0 253629.0 361848.0 312059.0 False True 246824.05867149483 325519.352847089 434709.086077503 191581.57555816203 345866.07164209365 333061.18580830673 279238.56507700786 252749.22019645377 296145.5246457739 309294.4000382286 0.7980230441966861 1.052457958523837 1.4054864427670635 0.6194149507216512 1.1182422688524098 1.0768419530620037 0.9028245097308394 0.8171800723363052 0.9574875090178501 1.0 18.238621187236074 -6.78163803851711 23.536151273394903 0.9041378971491622 1.0185000507916866 0.04689741437042916 0.19792474513931582 377.5652495867732 439943.954029682 0.08233812667733645 0.05561376557041771 1.653339194937336e-07 6.78163803851711 0.11436215364252444 DLEDLFYK ddPTM_KYSE-520_SHP099_60min_R1 1 DLEDLFYK 8 0 Q13242;H0YIB4;S4R3G0 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 0 136.16 0.005350199999999999 21750000.0 54565.0 62506.0 51291.0 36195.0 62687.0 68022.0 49442.0 51925.0 58312.0 58795.0 False True 51538.170677369206 59503.11793658119 54597.29992850159 39634.96191757645 67620.11025976021 67597.44946652021 54440.079867419845 51744.8842943861 47724.01072589699 58274.122041817805 0.8844092175320145 1.021089908379597 0.936904718861698 0.6801468735836844 1.1603797344426001 1.1599908689831815 0.9342067792690788 0.8879564801895035 0.818957181227887 1.0 15.830567743417413 -1.0000974466299293 0.004576154234210135 1.4459329983172482 0.4275275961064339 0.0026319729503500033 0.13926152086401722 1317013.7597577975 467.2827054657177 48584.390794944455 55628.24228388183 0.09997756460136828 1.0000974466299293 -1.0184054022108142 DLEEDHACIPIK ddPTM_KYSE-520_SHP099_60min_R1 2 DLEEDHACIPIK 12 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 154.15 1.9959e-05 992530000.0 1663090.0 1464850.0 927450.0 878220.0 1442330.0 1448330.0 1022470.0 1251770.0 1161910.0 1308820.0 False True 1570835.082412277 1394476.407215324 987234.9109724673 961685.764753528 1555833.1652648859 1439290.4352392638 1125831.245945569 1247427.9020353141 950936.4333675228 1297224.8730465514 1.2109196447360342 1.0749689095464043 0.7610360635885217 0.7413408305184552 1.1993550213163806 1.1095149847528512 0.8678767030588443 0.9616126917962278 0.7330544249696931 1.0 20.306997160793657 -6.795326744066577 24.995304587363716 0.8874369190845224 1.0030958668286922 0.12074858965271418 0.16361444805972214 505.7341440099432 373024.722969555 0.07409005513416778 0.049954542788836695 1.6020396330101462e-07 6.795326744066577 0.11565894774416985 DLEEDHACIPIKK ddPTM_KYSE-520_SHP099_60min_R1 8 DLEEDHACIPIKK 13 1 P13639 P13639 EEF2 Elongation factor 2 0 ;;;;;;; 177.1 6.4999e-07 43227600000.0 88970600.0 78079200.0 54433900.0 47501400.0 78847100.0 71443900.0 54667700.0 62983800.0 59462000.0 61793000.0 False True 84035223.45950608 74328158.03273143 57942796.29131945 52015918.77418336 85051918.19136876 70997992.11933084 60194044.621337034 62765323.89832942 48665199.71503781 61245562.09422652 1.3721030648754204 1.213608880238168 0.9460733857283284 0.8493010268100191 1.3887033653232879 1.1592348848084728 0.982831123808257 1.0248142355484426 0.7945914455020631 1.0 25.868101973198375 -6.852549091981123 3.946323362709244 0.9443340377628114 1.1448189611162347 0.26751906482836585 0.16590768777516035 0.36844945687277497 10.807560429036098 0.07810352119291711 0.05173917311252734 1.4042709379761817e-07 6.852549091981123 0.20048492335342327 DLEGFRVS(ph)PQASVVLEHR ddPTM_KYSE-520_SHP099_60min_R1 2 DLEGFRVSPQASVVLEHR 18 1 K7EIN8;Q0VDD7-2;Q0VDD7 K7EIN8 C19orf57 Uncharacterized protein C19orf57 1 DLEGFRVS(1)PQASVVLEHR;DLEGFRVS(1)PQASVVLEHR 221.39 1.2786e-18 1897290000.0 430200.0 464420.0 445600.0 454200.0 422910.0 402280.0 333380.0 431790.0 561540.0 394680.0 True False 406335.9484175618 442108.56609136827 474324.0889852085 497367.0314397904 456190.61097125674 399769.2213018103 367081.30387525674 430292.221270544 459578.49127143994 391183.4422563931 1.0387350396882018 1.1301822069493355 1.2125362112702167 1.2714419316188783 1.1661807778465636 1.0219482169181124 0.9383866089982942 1.0999755480154445 1.174841370126854 1.0 18.577485780616183 -6.251999741650368 21.890820248452627 1.0464885868737597 1.1706327623868487 0.3433706032294792 0.08047124725661053 152.63325060818389 353960.07558215916 0.02907900517248266 0.028611374206005 5.597579344793391e-07 6.251999741650368 0.12414417551308898 DLEGLSQR ddPTM_KYSE-520_SHP099_60min_R1 1 DLEGLSQR 8 0 P35579 P35579 MYH9 Myosin-9 0 128.61 0.0074309 0.0 159200.0 189100.0 153390.0 130670.0 186540.0 204150.0 184070.0 187390.0 217780.0 192500.0 False True 150368.85864266797 180015.3521551131 163277.76483267752 143088.83751263193 201219.63673258672 202875.8241244025 202677.5919500824 186739.98782715478 178236.64178703923 190794.599762734 0.7881190496463832 0.9435033925434702 0.8557777056359273 0.7499627226901211 1.0546401050282186 1.0633205781331985 1.0622815960311545 0.9787488118603912 0.9341807472993919 1.0 17.541660812416616 -5.77342529545565 24.999943140952944 1.01919334646506 0.8436692587003973 0.683582676066741 0.060226093784404196 138.92851711022703 289772.8533093373 0.01966041647805559 0.02246165171901158 1.6849022278961313e-06 5.77342529545565 -0.17552408776466266 DLEIAKEYDLPDAKS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 DLEIAKEYDLPDAKSR 16 2 A0A087WTJ8;Q96NG3 A0A087WTJ8 TTC25 Tetratricopeptide repeat protein 25 1 DLEIAKEY(0.001)DLPDAKS(0.999)R;DLEIAKEY(0.001)DLPDAKS(0.999)R 54.637 0.039225 5874600000.0 3763200.0 4939200.0 3664800.0 4334700.0 3212400.0 4112400.0 3079100.0 4022900.0 4715400.0 3885900.0 True False 3554447.794246785 4701913.418109651 3901038.87188732 4746668.584724919 3465197.6039442546 4086732.986182675 3390365.477120112 4008945.498851914 3859202.2255606796 3851473.9491844564 0.9228798743399091 1.2208088332274125 1.0128690790478692 1.2324291030788403 0.899706878370034 1.0610828581738259 0.88027740076965 1.0408860482363647 1.002006576307717 1.0 21.87697923649062 -5.77723689975563 24.999943938652095 0.9817062987966972 1.1000456619359036 0.24827392604342924 0.09932674664215115 321.06886835854516 508096.7918631705 0.028472097393125433 0.03239031339623501 1.670179313289512e-06 5.77723689975563 0.11833936313920634 DLELALS(ph)PIHNSSALPTTGR ddPTM_KYSE-520_SHP099_60min_R1 2 DLELALSPIHNSSALPTTGR 20 0 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 DLELALS(1)PIHNSSALPTTGR;DLELALS(1)PIHNSSALPTTGR 158.65 6.7758000000000005e-09 1003340000.0 628170.0 840880.0 887790.0 613170.0 626930.0 799880.0 608400.0 820430.0 905190.0 915870.0 True False 593324.1578741499 800482.8626133873 945018.363914223 671445.4924437179 676265.8242562492 794887.6522195792 669903.0094118003 817584.1198198005 740830.3139829651 907756.1043360783 0.6536162687753004 0.8818259208500181 1.0410487568193199 0.7396760971767906 0.7449862590027547 0.8756621392273096 0.7379768708928255 0.9006649648671562 0.8161116300339278 1.0 19.79194520110457 -8.990805074872902 0.901948365692243 1.0025947633061958 0.8232395465065968 0.2091308190612401 0.10429037926607031 11.447533012326884 8.889108854992951 0.20501075530905513 0.03387239300313945 1.0213978165529438e-09 8.990805074872902 -0.17935521679959898 DLELPLS(ph)PSLLGGPGPER ddPTM_KYSE-520_SHP099_60min_R1 4 DLELPLSPSLLGGPGPER 18 0 P19419 P19419 ELK1 ETS domain-containing protein Elk-1 1 DLELPLS(0.693)PS(0.307)LLGGPGPER;DLELPLS(0.996)PS(0.004)LLGGPGPER;DLELPLS(0.768)PS(0.232)LLGGPGPER;DLELPLS(0.995)PS(0.005)LLGGPGPER 242.09 1.1955999999999999e-23 167630000.0 227295.0 309445.0 216669.0 204995.0 222519.0 453739.0 369664.0 622773.0 743415.0 595414.0 True False 214686.49324865072 294578.7977135853 230635.8304226574 224477.66316600578 240029.97934007994 450907.0465950636 407033.2446929713 620612.7458193102 608429.5759670852 590139.0951850829 0.36378964722091406 0.49916841659371475 0.3908160504945432 0.38038093899812514 0.40673458392855727 0.7640690987497575 0.6897242497810031 1.0516380813995554 1.0309935080241819 1.0 19.170695510746523 -6.7544320846202215 1.1296656057791026 1.0451231591185222 0.40176173508218027 0.9149395946953922 0.07969480036635047 0.12954386971998422 0.329472902994458 0.05403915874990302 0.030903253194346524 1.760223907750631e-07 6.7544320846202215 -0.6433614240363419 down DLESCS(ph)DDDNQGSK ddPTM_KYSE-520_SHP099_60min_R1 1 DLESCSDDDNQGSK 14 0 A0A0A0MRK1;E9PAV9;Q5T3I0;Q5T3I0-3;F8W895 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 DLESCS(1)DDDNQGSK 195.23 7.901000000000001e-07 0.0 745760.0 650790.0 592340.0 683140.0 684850.0 663080.0 651560.0 680730.0 815430.0 677170.0 True False 704391.2061642979 619525.0715442945 630523.18417751 748065.4202064693 738743.7987365279 658941.4717629628 717426.0434128091 678368.7065135763 667368.4673175011 671170.8006302878 1.0494962020141716 0.9230512873362585 0.9394377460780382 1.1145678857065455 1.1006792876608802 0.9817791106886046 1.0689172454151517 1.0107244026059075 0.9943347754264398 1.0 19.35632042695142 -5.2352238073464274 24.857569120888307 1.0406295190006776 0.9659006950825326 0.25905206867398844 0.052487402768777384 925.2475393488788 877317.8622549871 0.014504958973388958 0.025116009840868977 5.818033166230997e-06 5.2352238073464274 -0.07472882391814495 DLFAFQES(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 6 DLFAFQESPPR 11 0 E7EX48;P51957-3;P51957;P51957-2 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 DLFAFQES(1)PPR;DLFAFQES(1)PPR;DLFAFQES(1)PPR;DLFAFQES(1)PPR;DLFAFQES(1)PPR;DLFAFQES(1)PPR 148.41 6.3273e-05 1483928000.0 1943374.0 1997918.0 1829715.0 1458028.0 1630548.0 1654084.0 1500154.0 1475867.0 1962960.0 1588755.0 True False 1835571.1701999751 1901935.020343944 1947661.3565475103 1596598.5427478962 1758862.851050957 1643760.2482046953 1651804.2064121456 1470747.561846946 1606535.9461947219 1574679.8667326847 1.1656789478159875 1.2078232919115703 1.2368617886686566 1.0139194489484968 1.1169653516307636 1.0438694765402354 1.0489777899043613 0.9339978194416185 1.0202301941715528 1.0 20.58662712706584 -5.682502983804666 0.6969675192039102 0.9886414287179413 1.2207804951422754 0.6937032180725526 0.05178787117263051 0.46616038432432755 0.47507430887718255 0.03160633203729177 0.06379317930328451 2.0772894535808293e-06 5.682502983804666 0.23213906642433413 DLFDLNS(ph)S(ph)EEDDTEGFSER ddPTM_KYSE-520_SHP099_60min_R1 12 DLFDLNSSEEDDTEGFSER 19 0 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 DLFDLNS(1)S(1)EEDDTEGFSER;DLFDLNS(0.999)S(0.997)EEDDT(0.004)EGFSER;DLFDLNS(1)S(1)EEDDTEGFSER;DLFDLNS(1)S(1)EEDDTEGFSER;DLFDLNS(1)S(1)EEDDTEGFSER;DLFDLNS(1)S(1)EEDDTEGFSER;DLFDLNS(1)S(1)EEDDTEGFSER;DLFDLNS(1)S(1)EEDDTEGFSER;DLFDLNS(1)S(1)EEDDTEGFSER;DLFDLNS(1)S(1)EEDDTEGFSER;DLFDLNS(1)S(1)EEDDTEGFSER;DLFDLNS(1)S(1)EEDDTEGFSER 235.56 5.6959e-26 19128340000.0 9990608.0 10094372.0 8636712.0 8771177.0 9672472.0 9780290.0 9126600.0 9527828.0 11014432.0 9471632.0 True False 9436409.058456702 9609423.21715873 9193448.274747796 9604787.024929466 10433640.517562553 9719247.582295625 10049205.795032455 9494778.188479764 9014488.800035382 9387720.70929819 1.0051863866284698 1.0236162232266828 0.9793056865914243 1.0231223661581963 1.1114136051393624 1.0353149484591153 1.0704627998869938 1.011403990648714 0.9602425422719345 1.0 23.162343490722524 -1.0018672619534672 24.99248095077344 1.0254124045784025 0.0007201695143903564 0.0 0.041420204852315935 0.0 0.0 0.00997044055224378 0.0 0.09957097002057677 1.0018672619534672 -1.0246922350640122 DLFDLNS(ph)SEEDDTEGFSER ddPTM_KYSE-520_SHP099_60min_R1 6 DLFDLNSSEEDDTEGFSER 19 0 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 DLFDLNS(0.919)S(0.081)EEDDTEGFSER;DLFDLNS(0.988)S(0.012)EEDDTEGFSER;DLFDLNS(0.923)S(0.077)EEDDTEGFSER;DLFDLNS(0.991)S(0.009)EEDDTEGFSER;DLFDLNS(0.909)S(0.091)EEDDTEGFSER;DLFDLNS(0.998)S(0.002)EEDDTEGFSER 340.31 8.071399999999999e-65 767266000.0 1140435.0 1047310.0 929862.0 924893.0 972880.0 1032849.0 947686.0 946881.0 1195432.0 1004554.0 True False 1077172.7971491895 996995.6555556408 989802.3923518042 1012794.5526407803 1049440.1210700064 1026402.6062751174 1043487.3494040626 943596.4908146864 978371.6831883732 995654.4330911853 1.0818741536708836 1.0013470762745378 0.9941224178340548 1.017214928171796 1.0540204374040036 1.030882374609099 1.0480416846680143 0.9477148491019362 0.9826418189600635 1.0 19.925285580010904 -7.256369435270445 24.997665574843015 0.9738837499444648 1.0300037101863384 0.4687671414593758 0.027035688473375424 381.1807437608362 1879444.050311951 0.013422782955044647 0.0074309495292384274 5.5415411779724585e-08 7.256369435270445 0.0561199602418736 DLFDPIIEDR ddPTM_KYSE-520_SHP099_60min_R1 4 DLFDPIIEDR 10 0 P12277;G3V4N7;G3V461 P12277 CKB Creatine kinase B-type 0 ;;; 131.12 0.0026035999999999998 447579000.0 318025.0 322292.0 467136.0 199191.0 340337.0 323708.0 283958.0 307416.0 396512.0 358408.0 False True 300383.5192828802 306808.6085498457 497248.33400402666 218122.05275104195 367119.58564735926 321687.61829861416 312663.24580301746 306349.6456474337 324515.4160541031 355232.78395720496 0.8455962761563908 0.8636832589944937 1.3997816543417074 0.6140256828810012 1.033462006399686 0.9055684971276976 0.8801643877573083 0.8623912529546817 0.9135289047341915 1.0 18.438405206659496 -5.3010200785258705 24.998979175647964 0.8878754548928524 1.019088199200807 0.1291841756845622 0.17595992738058633 1182.156299896914 746641.8062284248 0.0483779567174115 0.07175754232150063 5.000114176575503e-06 5.3010200785258705 0.1312127443079546 DLFDSMDK ddPTM_KYSE-520_SHP099_60min_R1 2 DLFDSMDK 8 0 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 0 ; 134.91 0.005700899999999999 302750000.0 606770.0 699190.0 700890.0 487470.0 662650.0 863530.0 687710.0 758780.0 843140.0 824320.0 False True 573111.2585339935 665599.8628944132 746070.4908636503 533799.0022368002 714796.7850372497 858140.3889598111 757230.4382028098 756147.9692805837 690047.0298297566 817017.1661112556 0.7014678299377999 0.8146705975132186 0.9131637887300592 0.6533510241620935 0.8748858832911152 1.0503333645292778 0.9268231679965651 0.9254982644729606 0.8445930617518884 1.0 19.640006865174243 -5.99514756273828 24.99402336730266 0.9455157984132837 0.7815019174555983 0.5159252643748484 0.0813350364617097 119.336960622701 614675.5533229708 0.02523759439376461 0.028518304128920202 1.011235802466146e-06 5.99514756273828 -0.16401388095768543 DLFDYS(ph)PPLHK ddPTM_KYSE-520_SHP099_60min_R1 14 DLFDYSPPLHK 11 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 DLFDY(0.006)S(0.994)PPLHK;DLFDY(0.064)S(0.936)PPLHK;DLFDYS(1)PPLHK;DLFDY(0.238)S(0.762)PPLHK;DLFDYS(1)PPLHK;DLFDYS(1)PPLHK;DLFDY(0.002)S(0.998)PPLHK;DLFDYS(1)PPLHK;DLFDYS(1)PPLHK;DLFDYS(1)PPLHK;DLFDYS(1)PPLHK;DLFDYS(1)PPLHK;DLFDYS(1)PPLHK;DLFDY(0.006)S(0.994)PPLHK 166.48 1.6007e-05 96736750000.0 16326440.0 14515040.0 13068250.0 14460300.0 15505400.0 15884850.0 14468170.0 16182920.0 17754080.0 16343150.0 True False 15420779.827248763 13817715.690880768 13910650.30493928 15834602.564352257 16725586.766342074 15785706.758964064 15930753.819331892 16126785.22764192 14530386.615935523 16198362.405778304 0.9519962228865703 0.8530316426277568 0.8587689271587757 0.9775434187534732 1.0325480037646089 0.974524854026785 0.9834792814395269 0.9955812089924071 0.8970281224694802 1.0 23.949344633588037 -5.273876045978691 22.302401148084833 0.9820103605261082 0.8844422093657025 0.5175583076424541 0.04070781333336088 129.955083366644 233045.87170141013 0.011379410437004982 0.017055848973196498 5.322601524514754e-06 5.273876045978691 -0.09756815116040574 DLFEDELVPLFEK ddPTM_KYSE-520_SHP099_60min_R1 5 DLFEDELVPLFEK 13 0 O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5;F6UXX1 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 ;;;; 193.85 1.4634e-07 481640700.0 1054916.0 1344260.0 2634551.0 759204.0 1478703.0 1330543.0 1159724.0 1026990.0 1915151.0 1472850.0 False True 996397.7065570895 1279679.7318246025 2804378.372890644 831358.5198969935 1595068.5134308236 1322238.5875971331 1276960.21973552 1023427.6113912681 1567407.8554279117 1459801.6948599603 0.6825568911623127 0.8766120332168561 1.9210680346275866 0.5695009964875717 1.0926610916038424 0.9057658942668759 0.8747491006701561 0.7010730395743554 1.073712861785843 1.0 20.477340970434064 DLFGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 DLFGSPK 7 0 A0A2R8YFA9;Q6ZW33 A0A2R8YFA9 MICALCL MICAL C-terminal-like protein 1 DLFGS(1)PK;DLFGS(1)PK;DLFGS(1)PK;DLFGS(1)PK 81.33800000000001 0.013411000000000001 615590000.0 3119490.0 2634400.0 2373190.0 2295300.0 2654870.0 2430180.0 2063340.0 2094410.0 2669770.0 2380270.0 True False 2946445.6711508567 2507839.4696849845 2526169.6246382566 2513444.6218928895 2863793.1648560204 2415012.3451905004 2271922.5434578313 2087144.9805489683 2185007.067424854 2359182.6596220373 1.248926469993173 1.0630119967424496 1.0707817024405275 1.0653878840799746 1.2138920880822455 1.0236648422879675 0.9630125646234675 0.8846898615655933 0.9261712137944045 1.0 21.16985569283119 -6.595440125524205 3.04005205027335 0.9323684626712821 1.1216843585047624 0.6476708268863502 0.0651655784204093 0.16358986236845463 3.0630675870167168 0.026968870308870234 0.0204218183936999 2.538398920938215e-07 6.595440125524205 0.1893158958334803 DLFLDVDKARR ddPTM_KYSE-520_SHP099_60min_R1 1 DLFLDVDKARR 11 2 K7EKI0;Q92817;A8MZ36 K7EKI0 EVPL;EVPLL Envoplakin;Envoplakin-like protein 0 48.981 0.05677000000000001 817860000.0 1276700.0 1244600.0 696120.0 712970.0 1040500.0 1048100.0 752800.0 832920.0 959990.0 787510.0 False True 1205878.9059616462 1184807.5478173129 740993.0090313813 780730.4544377538 1122381.4303648344 1041558.4191270446 828900.3706199916 830030.7949249888 785680.0153785478 780533.2740735098 1.544942343928925 1.5179462390295597 0.9493419866192602 1.0002526226245485 1.4379674354012608 1.3344189847170458 1.0619667324290476 1.0634150041972679 1.0065938781548387 1.0 19.574100609929705 -4.743901294312426 24.645464941879528 1.1235675496741524 1.5314448257538842 0.5593171533222998 0.15019851107656068 168.32308358406593 236532.1809821438 0.04187051922578763 0.11020326568297048 1.8034275741383872e-05 4.743901294312426 0.4078772760797318 DLFNGLDS(ph)EEEKDGEEK ddPTM_KYSE-520_SHP099_60min_R1 3 DLFNGLDSEEEKDGEEK 17 1 Q96S90-2;Q96S90 Q96S90-2 LYSMD1 LysM and putative peptidoglycan-binding domain-containing protein 1 1 DLFNGLDS(1)EEEKDGEEK;DLFNGLDS(1)EEEKDGEEK;DLFNGLDS(1)EEEKDGEEK 225.23 1.3847e-18 761170000.0 601580.0 516280.0 513470.0 509900.0 586480.0 599280.0 544990.0 614680.0 667700.0 588650.0 True False 568209.1581800014 491477.1338479215 546569.0977810485 558360.7426929743 632632.6393852659 595539.6712283709 600082.9077898377 612547.8185473902 546462.5113472594 583435.0189627701 0.9739030735422135 0.842385386330887 0.936812292742966 0.9570230180657088 1.0843240786436839 1.0207472158375415 1.0285342639471045 1.0498989581331213 0.9366296049879893 1.0 19.154212456777955 -5.471727948473135 3.2508255636574335 1.0230352857694414 0.9108633882086689 0.48346223394313037 0.047316162930810174 0.19208640673337804 4.044039503892418 0.013663172882075199 0.020356977158326395 3.37498658968908e-06 5.471727948473135 -0.1121718975607725 DLFPYEESK ddPTM_KYSE-520_SHP099_60min_R1 2 DLFPYEESK 9 0 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 0 ; 171.36 0.0028614 227820000.0 731080.0 873470.0 676470.0 460910.0 788890.0 908590.0 734100.0 748240.0 775030.0 791340.0 False True 690525.5350281523 831507.1900948014 720076.3385902689 504714.74782235554 850971.1548299041 902919.152785652 808309.9921255795 745644.5300805281 634304.0889163797 784329.3432532048 0.8804025260154396 1.0601505569661775 0.918079050317778 0.6434984897146945 1.0849666178499524 1.151198996381502 1.0305747184886758 0.9506778453395335 0.8087216095797751 1.0 19.581100049832305 DLFSLDSEDPSPAS(ph)PPLR ddPTM_KYSE-520_SHP099_60min_R1 12 DLFSLDSEDPSPASPPLR 18 0 H3BTX0;Q9BTK6 H3BTX0 PAGR1 PAXIP1-associated glutamate-rich protein 1 1 DLFSLDSEDPS(0.006)PAS(0.993)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFSLDSEDPS(0.001)PAS(0.999)PPLR;DLFSLDSEDPSPAS(1)PPLR;DLFS(0.006)LDS(0.012)EDPS(0.246)PAS(0.736)PPLR;DLFSLDSEDPS(0.002)PAS(0.998)PPLR 343.59 2.8676999999999995e-59 9902577000.0 8033849.0 9163178.0 6893162.0 5243917.0 6117555.0 8823290.0 6443230.0 8373606.0 10119693.0 9412503.0 True False 7588195.380889071 8722965.174669415 7337506.251969161 5742297.295038865 6598971.774373427 8768220.574276753 7094574.568264948 8344559.915200328 8282211.84790068 9329115.546236515 0.8133885086191527 0.9350259551869706 0.7865168156191619 0.6155242977299581 0.7073523467115311 0.9398769401901089 0.760476653237186 0.8944642044407555 0.8877810342098111 1.0 23.15330888110405 -7.816396826304367 0.8559949674060896 0.9962921430567553 0.7875262716187187 0.33839590449292123 0.09180037060899622 0.7344775048108574 1.1907362275230726 0.09507874547702223 0.03516715058347732 1.5261709183904238e-08 7.816396826304367 -0.2087658714380366 DLGEELEALK ddPTM_KYSE-520_SHP099_60min_R1 2 DLGEELEALK 10 0 P35579;P35749-4;P35749-3;P35749;P35749-2 P35579 MYH9;MYH11 Myosin-9;Myosin-11 0 ; 125.48 0.0032873000000000004 77781000.0 77865.0 96178.0 115605.0 62229.0 111921.0 106143.0 85581.0 102342.0 98569.0 112874.0 False True 73545.67322997075 91557.4645138787 123057.08327454007 68143.22545016884 120728.54595661962 105480.52216525322 94232.36267007118 101986.99948880236 80671.35432228261 111874.02417464316 0.6573972266802598 0.8183978827019855 1.0999611767110422 0.6091067694480402 1.079147253773172 0.9428508802060321 0.8423077954447038 0.9116235894902068 0.7210910210608765 1.0 16.771515572907177 -4.365016181776838 4.014946408860365 0.8961803400135975 0.6565747739633648 0.2075798497610335 0.14337158368404124 0.3336963840044979 8.529878211066785 0.03416010081835351 0.1770662354258749 4.3150299876182885e-05 4.365016181776838 -0.23960556605023264 DLGGACPPQDHDMQGLAERIS(ph)VL ddPTM_KYSE-520_SHP099_60min_R1 4 DLGGACPPQDHDMQGLAERISVL 23 1 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 DLGGACPPQDHDMQGLAERIS(1)VL;DLGGACPPQDHDMQGLAERIS(1)VL;DLGGACPPQDHDMQGLAERIS(1)VL;DLGGACPPQDHDMQGLAERIS(1)VL 243.55 1.4148999999999998e-28 1583000000.0 723600.0 646480.0 592280.0 510950.0 501909.0 508606.0 540489.0 641840.0 739927.0 723920.0 True False 683460.4655391626 615422.1304137364 630459.316481506 559510.5343772803 541406.3828284333 505431.60129618336 595126.9027843104 639613.6068465817 605574.9088417615 717506.6320012372 0.9525493355132976 0.8577232641003313 0.8786808210023888 0.7797984149870764 0.7545663812449607 0.7044277763488489 0.8294374940122982 0.8914392959164714 0.843999040333215 1.0 19.45263264129284 -9.696976013315105 7.530622825418969 1.0000164758774577 0.8286452622937938 0.3522183725949848 0.06795913674385536 0.0 0.0 0.07248373281707052 0.01757988744375476 2.0092037806479152e-10 9.696976013315105 -0.17137121358366392 DLGHPVEEEDELES(ph)GDQEDEDDESEDPGKDLDHI ddPTM_KYSE-520_SHP099_60min_R1 6 DLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI 34 1 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 1 DLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;DLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;DLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;DLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;DLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;DLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI 211.6 1.6848e-22 11351300000.0 1787941.0 1502750.0 1359238.0 1558290.0 1559280.0 1445846.0 1462660.0 1663835.0 1687640.0 1474069.0 True False 1688760.3485579805 1430555.6343262629 1446856.6563376938 1706389.413083027 1681986.4649104078 1436821.9388046598 1610519.9469859712 1658063.5447270097 1381207.1179423237 1461009.895468329 1.1558856334895977 0.9791553354727252 0.9903127013892685 1.1679519888097958 1.1512491942234548 0.9834443580849835 1.1023333599460095 1.1348749586637912 0.9453783456405512 1.0 20.47853451891989 -7.771008332156241 24.99983300050637 0.9726891295836838 1.0790023193014777 0.2747630660656706 0.07153122488385104 317.03993782877956 828267.6695846029 0.06753511163795521 0.01832558702344235 1.6943052940433962e-08 7.771008332156241 0.10631318971779391 DLGQS(ph)NSDLDMPFAK ddPTM_KYSE-520_SHP099_60min_R1 3 DLGQSNSDLDMPFAK 15 0 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 DLGQS(1)NSDLDMPFAK;DLGQS(0.997)NS(0.003)DLDMPFAK;DLGQS(0.999)NS(0.001)DLDMPFAK 275.37 1.6675e-25 1114590000.0 1768240.0 1870420.0 1470430.0 1307970.0 1598890.0 1591480.0 1371810.0 1697700.0 1809900.0 1750550.0 True False 1670152.2023009523 1780562.2156423423 1565216.270571185 1432279.0755444795 1724713.54656034 1581546.982990469 1510485.942375416 1691811.074946159 1481267.783866114 1735041.4889072932 0.9626007291346057 1.0262361027249658 0.9021203703647099 0.8255013408621776 0.9940474378203731 0.9115326596521373 0.8705762669264472 0.9750839307085618 0.8537362324396043 1.0 20.72653873075892 -4.770460996709923 24.972844564186364 0.9133762906151947 0.9944184195117356 0.22514979335735408 0.05751951937611265 225.83143126820926 625132.3054126983 0.014349013708235641 0.030575964614424647 1.6964419501465e-05 4.770460996709923 0.08104212889654094 DLGSTEDGDGT(ph)DDFLT(ph)DKEDEK ddPTM_KYSE-520_SHP099_60min_R1 4 DLGSTEDGDGTDDFLTDKEDEK 22 1 Q15527 Q15527 SURF2 Surfeit locus protein 2 2 DLGS(0.002)T(0.011)EDGDGT(0.988)DDFLT(1)DKEDEK;DLGS(0.002)T(0.007)EDGDGT(0.992)DDFLT(1)DKEDEK;DLGSTEDGDGT(1)DDFLT(1)DKEDEK;DLGSTEDGDGT(1)DDFLT(1)DKEDEK 158.8 1.8939e-09 3362220000.0 6410760.0 5358950.0 5388810.0 5659040.0 5519580.0 5695590.0 5856110.0 6068310.0 6946470.0 6144230.0 True False 6055142.363266771 5101497.99805206 5736181.315000855 6196873.46014758 5953939.543885764 5660041.7101381635 6448102.748925929 6047260.448964205 5685166.154258496 6089796.902338599 0.9943094097179956 0.8377123375153918 0.9419331066357979 1.0175829439842012 0.9776909869686027 0.9294302915035801 1.0588370765615736 0.9930151277527729 0.9335559535779072 1.0 22.53796268368323 -5.005519149510939 24.907410226061646 0.986493337817024 0.9094638363420535 0.25585800423497895 0.04990814763647544 281.06200420018877 1268429.7306936712 0.012711000535782254 0.025239167008234517 9.873720982154396e-06 5.005519149510939 -0.07702950147497045 DLGSTEDGDGT(ph)DDFLTDKEDEK ddPTM_KYSE-520_SHP099_60min_R1 3 DLGSTEDGDGTDDFLTDKEDEK 22 1 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 DLGSTEDGDGT(1)DDFLTDKEDEK;DLGSTEDGDGT(1)DDFLTDKEDEK;DLGSTEDGDGT(1)DDFLTDKEDEK 377.55 3.4529e-79 4094240000.0 2411010.0 2312850.0 2311750.0 2219270.0 2302860.0 2443630.0 2346780.0 2312540.0 2899590.0 2204680.0 True False 2277266.4690707247 2201737.2143413736 2460769.1039307774 2430188.7535521444 2484081.9805189483 2428378.3987514754 2584015.4247656586 2304518.338490895 2373097.5487155933 2185148.250415084 1.042156507522152 1.0075916880802658 1.1261337089890067 1.1121390748158682 1.136802493856918 1.111310593361429 1.1825355209994595 1.054627912798656 1.086012149640102 1.0 21.05929973137645 -4.761115184049069 24.9999835124071 1.1080750020960737 1.024874079860415 0.28579921862880364 0.04726909872278497 8.92622582307222 688060.4140560306 0.011772319633773393 0.027482334024783873 1.7333442173695843e-05 4.761115184049069 -0.08320092223565867 DLHILPPPLIPT(ph)PPPDDPR ddPTM_KYSE-520_SHP099_60min_R1 6 DLHILPPPLIPTPPPDDPR 19 0 Q9NRS6;E9PK26;E9PMW6;Q9NRS6-2 Q9NRS6 SNX15 Sorting nexin-15 1 DLHILPPPLIPT(1)PPPDDPR;DLHILPPPLIPT(1)PPPDDPR;DLHILPPPLIPT(1)PPPDDPR;DLHILPPPLIPT(1)PPPDDPR;DLHILPPPLIPT(1)PPPDDPR;DLHILPPPLIPT(1)PPPDDPR 114.88 5.4421999999999995e-05 1228790000.0 820131.0 915349.0 688685.0 578129.0 604307.0 875186.0 622449.0 792903.0 953463.0 896843.0 True False 774636.6985393845 871374.2600731399 733078.7370349603 633074.2063391778 651862.5228635102 869723.6395402375 685372.2194368273 790152.6045579524 780338.1540462659 888897.6687532961 0.8714576781665253 0.9802863599532966 0.8247054332622153 0.7122014474704181 0.7333380947862824 0.9784294301953218 0.7710361310746614 0.8889129000261228 0.8778717522577284 1.0 19.76165781781168 -8.325961388017946 1.0506742711797472 0.9998290932768817 0.8396497297779046 0.23120559968608412 0.08603579565157242 1.8058799854016974 3.5276700280275133 0.08779419200184957 0.028018358710440346 4.721050130148592e-09 8.325961388017946 -0.1601793634989771 DLHNQMIKS(ph)IK ddPTM_KYSE-520_SHP099_60min_R1 1 DLHNQMIKSIK 11 1 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 DLHNQMIKS(1)IK 69.979 0.016038999999999998 568640000.0 151350.0 1765200.0 575420.0 415420.0 613190.0 608320.0 521100.0 872480.0 1646400.0 134180.0 True False 142954.31379125497 1680397.1423807817 612512.4939045518 454901.3918994224 661444.5644261548 604523.2492351539 573777.8734459059 869453.5705183621 1347455.2623665254 132991.2695904602 1.0749150243581813 12.635394395101864 4.60565942253768 3.4205357487019104 4.973593879230114 4.545585970393036 4.314402555993528 6.537674038271834 10.131907654659924 1.0 17.02097201541171 -8.785408367635018 16.158034133250585 1.000000000002398 5.816230944669497 0.17212538415417078 3.160878290733401 0.0 0.0 2.9792314404993094 0.7225697595493948 1.6390478496696602e-09 8.785408367635018 4.816230944667099 DLHQGIEAAS(ph)DEEDLR ddPTM_KYSE-520_SHP099_60min_R1 1 DLHQGIEAASDEEDLR 16 0 A0A0C4DGG1;Q9UKS6;E9PIY1 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 DLHQGIEAAS(1)DEEDLR 202.97 3.3426999999999997e-10 0.0 62074.0 80563.0 44226.0 68369.0 69151.0 45907.0 65790.0 58843.0 86352.0 77198.0 True False 58630.63147854887 76692.6325524716 47076.87872410192 74866.76920411066 74592.79028463119 45620.47738466298 72440.69524852461 58638.88736705948 70672.65355677487 76514.08577913526 0.7662723913057189 1.0023335150844215 0.6152707471405139 0.9784704141956329 0.9748896497299849 0.5962363259014891 0.9467628673971371 0.7663802915495306 0.9236554660115497 1.0 16.22343774321173 -7.989707343082995 6.443388617827822 0.9999262424498153 0.8353862454860943 0.13379303282637456 0.13979086109238983 0.24368108637063893 46.19733240991485 0.12733312434608768 0.03301193776899206 1.0239827885141393e-08 7.989707343082995 -0.164539996963721 DLIDFDDR ddPTM_KYSE-520_SHP099_60min_R1 2 DLIDFDDR 8 0 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 0 ; 105.57 0.013365 123574000.0 287910.0 313350.0 425370.0 160595.0 278680.0 310810.0 220627.0 246710.0 378450.0 288620.0 False True 271939.05836564436 298296.195652061 452790.03081606363 175857.90051535284 300610.5305277004 308870.1195008846 242930.1302720204 245854.2205925467 309733.019948136 286063.0513429624 0.9506262940599598 1.0427638041741791 1.582832975773622 0.6147522362282151 1.0508541005783263 1.0797274169133386 0.8492188317629678 0.8594406702940145 1.082743886335728 1.0 18.12597364184039 -5.274207454852291 24.999866252681088 0.9353938776534669 1.1771433443511454 0.2536930803636591 0.20248637821499388 1115.426867426472 2184001.4285300886 0.05670588614289092 0.08473953025502856 5.3185414118835955e-06 5.274207454852291 0.2417494666976785 DLIHDVSFDFHGR ddPTM_KYSE-520_SHP099_60min_R1 2 DLIHDVSFDFHGR 13 0 Q96EE3-1;K7ENI5;K7EP88;K7ELV2;Q96EE3 Q96EE3-1 SEH1L Nucleoporin SEH1 0 ; 214.81 3.3878999999999995e-11 323850000.0 254380.0 274520.0 190051.0 243040.0 268470.0 263750.0 202660.0 191685.0 193672.0 195223.0 False True 240269.03430604222 261331.64713707898 202301.99155235145 266138.4485273595 289597.0616146539 262103.83841690538 223146.8505709983 191020.08947461552 158506.0468738153 193493.47610119582 1.2417423013289766 1.3505966836856258 1.0455235785135661 1.375438872100116 1.4966761022123378 1.354587470844892 1.1532525802280484 0.9872172091978608 0.8191803158826796 1.0 17.561925399177973 -7.146065425472077 2.4251319741439077 0.9131600598715142 1.3104184737770344 0.6716579457309662 0.11748452083497603 0.1902872672876015 2.1550108343531527 0.07522118559208399 0.036442397120465826 7.143886969426395e-08 7.146065425472077 0.3972584139055202 DLIHTGVANDHEEDFELRK ddPTM_KYSE-520_SHP099_60min_R1 2 DLIHTGVANDHEEDFELRK 19 1 E9PFH4;C9J7E5;Q9Y5L0-5;Q9Y5L0-3;Q9Y5L0;Q9Y5L0-1 E9PFH4 TNPO3 Transportin-3 0 ; 242.18 3.893e-26 770480000.0 467830.0 383360.0 280120.0 233243.0 397510.0 315840.0 314900.0 348000.0 304888.0 347270.0 False True 441878.53730401647 364942.8101649084 298176.98340784654 255410.344592935 428791.77547748777 313868.72540510085 346733.1651278366 346792.86922381073 249528.0248010236 344193.45797197195 1.2838086461829241 1.0602839819071346 0.8663063649284334 0.7420546168943553 1.2457871163617664 0.9118962552468372 1.0073787200106268 1.0075521808786105 0.7249644611820104 1.0 18.39286015100991 -4.37398665183369 3.0840422869970916 0.9445255246780343 1.2994831019947968 0.35705099763981796 0.14124057565413814 0.32889322026209344 5.008159357706895 0.03604994051805295 0.24124157838851557 4.226816053071551e-05 4.37398665183369 0.3549575773167625 DLISHDEMFSDIYK ddPTM_KYSE-520_SHP099_60min_R1 7 DLISHDEMFSDIYK 14 0 Q5W0H4;A0A0B4J2C3;P13693 Q5W0H4 TPT1 Translationally-controlled tumor protein 0 ;;;;;; 276.71 4.6331e-25 15553000000.0 19380530.0 17469810.0 10521040.0 12911670.0 18501190.0 17992690.0 13560560.0 13587390.0 12902670.0 15203800.0 False True 18305453.36677127 16630534.104880603 11199243.072659206 14138791.234764867 19957128.39562865 17880390.947660524 14931393.743111921 13540258.515410656 10559870.377841769 15069106.160377394 1.2147670320953412 1.1036178209832257 0.7431922606070969 0.9382634301124846 1.3243737341305477 1.1865594918081541 0.9908612749953561 0.8985442382119067 0.7007628896800674 1.0 23.845090508736174 -7.203036645088464 3.0502812866365043 0.8425523261093738 1.0745013505419208 0.2556825354370118 0.16494930472155245 0.39791018221089286 7.290337238357717 0.10238505766816751 0.05052228463598671 6.265609942060374e-08 7.203036645088464 0.23194902443254695 DLISLDS(ph)SPAKER ddPTM_KYSE-520_SHP099_60min_R1 1 DLISLDSSPAKER 13 1 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 DLIS(0.001)LDS(0.617)S(0.383)PAKER 72.187 0.01341 755080000.0 486240.0 461380.0 370250.0 374420.0 374610.0 361840.0 366750.0 332860.0 482410.0 361250.0 True False 459267.29790459113 439214.6122545009 394116.907420946 410004.7642265226 404089.67576066393 359581.6223422667 403824.66913507186 331705.3863501082 394816.5045664696 358049.60604824725 1.2826918118231494 1.2266864837586686 1.1007326939157103 1.1451060336351113 1.128585729280799 1.0042787822361492 1.127845589866831 0.9264229892921899 1.1026866051439475 1.0 18.449799954222392 -1.0000000000000515 0.2780685578132254 1.0020634255950809 3.188168579246987 0.6695846812556356 0.05809620556106304 28.334099847295242 0.39881658820241994 0.061158907727663775 30.02872542127918 0.09999999999998814 1.0000000000000515 2.186105153651906 DLISLDSS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 5 DLISLDSSPAK 11 0 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 DLISLDS(0.002)S(0.998)PAK;DLISLDS(0.144)S(0.856)PAK;DLISLDS(0.001)S(0.999)PAK;DLISLDS(0.007)S(0.993)PAK;DLISLDS(0.046)S(0.954)PAK 232.92 4.5208e-14 2354290000.0 10466000.0 9444700.0 7184980.0 6815360.0 7738700.0 9380900.0 7921600.0 9323500.0 9869700.0 9564500.0 True False 9885430.116546245 8990962.435216276 7648135.307174458 7463089.765287306 8347691.662820139 9322350.32343183 8722392.635365738 9291158.954621263 8077611.274889991 9479765.971068393 1.0427926329316475 0.9484371726745245 0.8067852445425395 0.7872651907298295 0.8805799308017446 0.9833945639463058 0.9201063256187855 0.9801042539422654 0.8520897350780933 1.0 23.176420012778234 -6.236534878526332 23.27280639794154 0.9442059539642522 0.8855593249703487 0.10445465072200022 0.07718252856819512 790.4048979124706 738617.8997466904 0.027253509491027412 0.027237460371632195 5.800495864203391e-07 6.236534878526332 -0.058646628993903493 DLISLDSS(ph)PAKER ddPTM_KYSE-520_SHP099_60min_R1 5 DLISLDSSPAKER 13 1 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 DLISLDS(0.272)S(0.728)PAKER;DLISLDS(0.195)S(0.805)PAKER;DLISLDS(0.193)S(0.807)PAKER;DLISLDS(0.193)S(0.807)PAKER;DLISLDS(0.268)S(0.732)PAKER 173.51 3.2366e-07 4245270000.0 3844840.0 3439160.0 3215600.0 2642430.0 2972790.0 3030540.0 2680330.0 2707000.0 3817260.0 2761560.0 True False 3631559.0607014806 3273937.5913155936 3422882.721141913 2893565.752724453 3206731.6601386657 3011625.275738269 2951283.9138999507 2697610.048818553 3124141.8092937535 2737094.726861168 1.3267933422479907 1.1961360194026107 1.2505532554465841 1.0571668288743232 1.1715822724981335 1.1002999809187919 1.078254210545504 0.9855742376560364 1.1414079968202056 1.0 21.384213934464743 -1.0000000000001965 0.2573713640025886 1.0190735753460372 3.0047383687456954 0.7025588351247283 0.05617988793314135 26.543529526969834 0.3649091206184763 0.0660968945915506 23.04424629747409 0.09999999999995475 1.0000000000001965 1.9856647933996583 DLKDEIVR ddPTM_KYSE-520_SHP099_60min_R1 2 DLKDEIVR 8 1 P15924;P15924-3 P15924 DSP Desmoplakin 0 ; 72.643 0.021805 412140000.0 553520.0 479750.0 324860.0 307170.0 556330.0 479410.0 346060.0 425730.0 457440.0 393530.0 False True 522815.1421852366 456702.0898805685 345800.9953943776 336363.34444597154 600110.0059152998 476417.8243618894 381043.12202013074 424253.24199612846 374380.42712399364 390043.63036170724 1.34040169224249 1.1709000079223073 0.8865700359564873 0.8623736378774979 1.538571480730982 1.2214475183714268 0.9769243550183607 1.0877071408721555 0.9598424329524665 1.0 18.573275987606053 -6.767442998922341 24.90583526596326 1.0134273936696327 1.159964014974437 0.15280106431468599 0.18788483531434516 343.4832821160029 1424911.7348835485 0.08392276606768584 0.05824582022685737 1.7082719157480056e-07 6.767442998922341 0.14653662130480427 DLKDYFSK ddPTM_KYSE-520_SHP099_60min_R1 4 DLKDYFSK 8 1 Q14103-3;Q14103;H0YA96;H0Y8G5;Q14103-4;Q14103-2;D6RAF8;D6RD83;D6RF44;D6RBQ9 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 0 ;;; 85.355 0.005716399999999999 6074990000.0 8670180.0 8420760.0 5967740.0 4443960.0 7496230.0 7162780.0 5092740.0 5071590.0 6961340.0 5866830.0 False True 8189227.831824676 8016214.049781543 6352430.0691216085 4866312.622274711 8086140.6532857185 7118074.433121673 5607563.859552685 5053997.838008 5697336.13710069 5814854.450524667 1.4083289446885074 1.378575184983048 1.0924486800436486 0.8368760841186024 1.390600697246363 1.2241191062795076 0.9643515426334913 0.8691529394260218 0.9797899819464314 1.0 22.471311649907577 -1.0000000000829903 0.32752905027359414 0.9724551960384407 5.719159162539373 0.4166063918081482 0.15946407852025715 62.121787170303165 0.8859236934686102 0.15995678491868057 178.03250146155762 0.09999999998089078 1.0000000000829903 4.746703966500933 DLKDYFTK ddPTM_KYSE-520_SHP099_60min_R1 3 DLKDYFTK 8 1 Q99729-3;Q99729-4;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 0 ;; 121.83 0.0010146 2764530000.0 6245380.0 6080100.0 4751760.0 3581280.0 6388910.0 5938400.0 4028720.0 4461760.0 5500580.0 4929960.0 False True 5898936.321543632 5788002.869583845 5058066.052684815 3921643.7744489033 6891680.869074683 5901336.242862366 4435982.334118199 4446283.195942609 4501813.3303377405 4886284.389850846 1.2072437563798242 1.1845407282486324 1.0351558871994375 0.8025819746788443 1.4104133773689445 1.207734911033802 0.9078436661058952 0.9099517836452274 0.9213162745271891 1.0 22.2203064026157 -6.7705228468592535 24.938564485623274 0.9272738588020012 1.1352592688590089 0.3212771793797081 0.14672082552010338 252.76882533656675 693966.7177538486 0.06459024243614689 0.04424449620455996 1.6962003681757397e-07 6.7705228468592535 0.20798541005700766 DLKIES(ph)DVQEPTEPEDDLDIMLGNK ddPTM_KYSE-520_SHP099_60min_R1 4 DLKIESDVQEPTEPEDDLDIMLGNK 25 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 DLKIES(1)DVQEPTEPEDDLDIMLGNK;DLKIES(1)DVQEPTEPEDDLDIMLGNK;DLKIES(1)DVQEPTEPEDDLDIMLGNK;DLKIES(1)DVQEPTEPEDDLDIMLGNK 206.16 2.0587e-16 404095000.0 478027.0 482138.0 478229.0 439244.0 443952.0 402512.0 322966.0 400216.0 649292.0 346768.0 True False 451509.8893868002 458975.3667761074 509056.4065334541 480989.61769647565 478888.49665865436 399999.7733037542 355614.55512441124 398827.74410711636 531396.940119342 343695.90530142165 1.3136900452474858 1.3354112158350724 1.4811244436764852 1.3994627526174548 1.3933494384772163 1.1638188501342606 1.034677892983732 1.1604087740217448 1.546125315788404 1.0 18.3907731383771 -6.259211257407603 24.180489175898057 1.1818861915658003 1.3880617944914364 0.3352843744236398 0.14329429866183674 156.14250383940487 1694527.4665974053 0.049048115945096574 0.046803593489018885 5.50539827680476e-07 6.259211257407603 0.20617560292563608 DLKPENILCES(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 4 DLKPENILCESPEK 14 1 A0A499FJN1;A0A499FIS5;Q9BUB5-2;Q9BUB5;Q7Z319;A0A499FJS1;Q9BUB5-3 A0A499FJN1 MKNK1;DKFZp686E14208 MAP kinase-interacting serine/threonine-protein kinase 1 1 DLKPENILCES(1)PEK;DLKPENILCES(1)PEK;DLKPENILCES(1)PEK;DLKPENILCES(1)PEK 231.77 1.5850999999999999e-15 2970190000.0 4817990.0 4029230.0 3799170.0 4137690.0 4135020.0 4167780.0 4004090.0 4108320.0 4439780.0 4327600.0 True False 4550726.490275055 3835659.742802468 4044070.5770869227 4530934.813558138 4460422.54895454 4141767.339060507 4408862.493352553 4094069.1968090944 3633627.8697459013 4289260.830821856 1.0609582092966587 0.8942472593972621 0.9428362453565332 1.0563439698046937 1.0399047119967026 0.9656133078451449 1.0278839798389645 0.9544929437235083 0.8471454670313602 1.0 22.032297618543517 -7.522234154598722 24.99899019067792 0.915988213565624 0.9944530554739481 0.1988008107838385 0.0606394527134655 37.526922544739485 1455764.6187472702 0.03970932129592963 0.01539874084673377 3.0044559807044406e-08 7.522234154598722 0.07846484190832415 DLLDDLK ddPTM_KYSE-520_SHP099_60min_R1 4 DLLDDLK 7 0 P08758;E9PHT9 P08758 ANXA5 Annexin A5;Annexin 0 ;;; 117.18 0.020149 1338480000.0 1952970.0 2208910.0 2248450.0 1309380.0 2322650.0 2398540.0 1958300.0 2222960.0 2228800.0 2485930.0 False True 1844634.8609508243 2102790.6479584933 2393388.6846472006 1433823.0815205476 2505429.340929254 2383569.8221667637 2156264.075166219 2215249.070602763 1824106.1034757723 2463906.5942242737 0.7486626584282435 0.8534376477126672 0.9713796335695613 0.5819307780910286 1.0168524029288752 0.967394554547713 0.8751403483479406 0.8990799715360975 0.740330866337109 1.0 21.232516134365238 DLLDDLKSELTGK ddPTM_KYSE-520_SHP099_60min_R1 3 DLLDDLKSELTGK 13 1 P08758;E9PHT9 P08758 ANXA5 Annexin A5;Annexin 0 ;; 186.56 3.2387000000000004e-08 1581914000.0 1357116.0 1549587.0 970678.0 877444.0 1360335.0 1427059.0 916614.0 1081867.0 1415292.0 1089217.0 False True 1281834.0701363261 1475142.514542493 1033249.4570197137 960836.0139468428 1467385.6252526178 1418152.1954403424 1009274.2884105652 1078114.2558866572 1158310.6494079472 1079567.3847780023 1.1873590182607425 1.3664200450496522 0.9570958437505842 0.8900194906725762 1.3592348619853543 1.313630085010363 0.9348877176556313 0.9986539711074692 1.072939647622031 1.0 20.042021866089847 -1.0000001181032967 0.1315346726335584 0.953550739423804 1.846042954098241 0.11782633920836316 0.16365089711594855 201.2052852498177 1.790529688407823 0.9298174050935255 33.373232798042025 0.09999997280571465 1.0000001181032967 0.8924922146744371 DLLDDLKSELTGKFEK ddPTM_KYSE-520_SHP099_60min_R1 2 DLLDDLKSELTGKFEK 16 2 P08758;E9PHT9 P08758 ANXA5 Annexin A5;Annexin 0 ; 158.15 3.2762e-07 170167000.0 396910.0 508920.0 380950.0 189025.0 386730.0 356588.0 162208.0 191480.0 480170.0 192768.0 False True 374892.61107953085 484470.71929550666 405506.6465415509 206989.87916756154 417163.4508072969 354362.4020223972 178605.56763752378 190815.80057176793 392983.2321006648 191060.2254912346 1.9621698347505094 2.5356963651114977 2.122402218980709 1.0833750386056031 2.1834133699713205 1.8547157112962507 0.9348129218329526 0.9987206917670163 2.0568552721544546 1.0 17.54366794684419 -5.385044672118341 0.42019317807256035 1.1960611845649978 2.550249042248845 0.3374075229592689 0.4655379315925224 2.6227482351971463 0.7025624449020791 0.43415010678469307 1.6373412617348482 4.120551323686483e-06 5.385044672118341 1.354187857683847 DLLEARR ddPTM_KYSE-520_SHP099_60min_R1 7 DLLEARR 7 1 F5H1R4 F5H1R4 HMHA1 0 ;;;;;; 120.49 0.006141 27198700000.0 7149340.0 8109480.0 28803600.0 8372450.0 16134500.0 6084130.0 14163300.0 5890890.0 39735600.0 8746000.0 False True 6752751.858344045 7719888.408222353 30660326.143389493 9168165.130731128 17404193.357252695 6046156.68787657 15595064.584487433 5870455.877534068 32520616.692961156 8668517.244285045 0.7789973380737033 0.8905661938103542 3.5369746958285333 1.0576393715748202 2.007747445934526 0.6974845313784964 1.799046381867545 0.6772156889235382 3.7515777815867244 1.0 23.04735380991556 -7.735063439310732 24.999747246815414 2.3757970232977783 1.4775494087008627 0.11684099747508447 1.0329174528492464 420.2243738431052 398300.544963072 0.6665508914667231 0.25176811268586186 1.8405031314206804e-08 7.735063439310732 -0.8982476145969156 DLLEEEEAWEASHKNDLQDT(ph)EISPR ddPTM_KYSE-520_SHP099_60min_R1 1 DLLEEEEAWEASHKNDLQDTEISPR 25 1 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 DLLEEEEAWEASHKNDLQDT(0.708)EIS(0.292)PR 204.92 1.5379000000000002e-15 703430000.0 221920.0 244290.0 205050.0 244680.0 229360.0 211250.0 145130.0 217840.0 272720.0 230100.0 True False 209609.65521344796 232553.9417132344 218267.85109160023 267934.31363427534 247409.3271201141 209931.51039079105 159801.1567323055 217084.36388423847 223200.92271173385 228061.49301509117 0.9190927080336959 1.0196984095769555 0.9570570121504779 1.1748336384719964 1.0848360407065416 0.9205039729214592 0.7006932850419041 0.9518676783803817 0.978687457320839 1.0 17.799063350171078 -6.379428049106105 5.980449874872844 0.8917417009868726 1.0337814918888126 0.25827557746629204 0.10067532571922626 0.3106234585176705 14.102390034909101 0.037476595016628346 0.032900961573873566 4.1741874777652513e-07 6.379428049106105 0.14203979090194008 DLLEEEEAWEASHKNDLQDTEIS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 DLLEEEEAWEASHKNDLQDTEISPR 25 1 Q9NS91 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 DLLEEEEAWEASHKNDLQDT(0.143)EIS(0.857)PR;DLLEEEEAWEASHKNDLQDT(0.168)EIS(0.832)PR;DLLEEEEAWEASHKNDLQDT(0.172)EIS(0.828)PR;DLLEEEEAWEASHKNDLQDTEIS(1)PR;DLLEEEEAWEASHKNDLQDTEIS(1)PR;DLLEEEEAWEASHKNDLQDT(0.04)EIS(0.96)PR;DLLEEEEAWEASHKNDLQDT(0.017)EIS(0.983)PR 286.93 1.0026999999999998e-48 2611610000.0 2538636.0 2518974.0 2214652.0 2207796.0 2319265.0 2473864.0 2166415.0 2277911.0 2709172.0 2353255.0 True False 2397812.8004346006 2397958.70798294 2357412.0114884856 2417624.2680419264 2501777.960687268 2458423.697142741 2385417.370372892 2270009.4584094216 2217254.657468441 2332406.991504685 1.0280421938230089 1.0281047504646548 1.010720693290183 1.0365361949469487 1.0726163871912073 1.054028609113695 1.0227277568028592 0.973247579293608 0.9506293993905597 1.0 21.153388121753707 -7.194998512048254 3.6537086082153163 0.9706369424495844 1.0380403077037632 0.686179284223116 0.019216758407194855 0.1408308218179622 3.7044632873328824 0.01109990608109647 0.005801239228926876 6.382656729714898e-08 7.194998512048254 0.06740336525417878 DLLES(ph)S(ph)SDSDEKVPLAK ddPTM_KYSE-520_SHP099_60min_R1 2 DLLESSSDSDEKVPLAK 17 1 P54198 P54198 HIRA Protein HIRA 2 DLLES(0.918)S(0.61)S(0.473)DSDEKVPLAK;DLLES(0.917)S(0.578)S(0.501)DS(0.003)DEKVPLAK 172.66 1.4513e-08 307073000.0 533560.0 445400.0 405840.0 457770.0 437420.0 462760.0 410790.0 450150.0 524070.0 465870.0 True False 503962.3631745093 424002.3154409696 432001.095766959 501276.3231664309 471842.4654206506 459871.74318789435 452316.66212405247 448588.5347158001 428912.09872960695 461742.7542413753 1.0914353469444238 0.9182652278704152 0.9355882508145025 1.085618168475665 1.0218730258060438 0.9959479362993904 0.979585836419221 0.9715118008788528 0.9288983850635452 1.0 18.81672979676623 -9.454193654892046 5.009946157710554 0.999999980745364 0.9910165360833741 0.0014107668128779949 0.05722294651704411 9720759.741284618 2620557.2167149396 0.05696166163098486 0.013951075540031199 3.514037122591887e-10 9.454193654892046 -0.008983444661989859 DLLES(ph)SS(ph)DSDEKVPLAK ddPTM_KYSE-520_SHP099_60min_R1 2 DLLESSSDSDEKVPLAK 17 1 P54198 P54198 HIRA Protein HIRA 2 DLLES(0.9)S(0.219)S(0.881)DSDEKVPLAK;DLLES(0.89)S(0.254)S(0.855)DS(0.001)DEKVPLAK 188.26 1.9734e-12 418710000.0 832760.0 714900.0 619590.0 686310.0 727830.0 726620.0 685880.0 704950.0 873490.0 793130.0 True False 786565.1427340963 680555.1309132229 659529.7627790505 751536.6960533741 785106.0802137798 722084.8950539967 755215.4439437311 702504.6929865668 714886.2348909951 786103.4852458026 1.0005872731732635 0.8657322396941463 0.8389859288981852 0.9560276861237679 0.9987312039054109 0.9185621341294674 0.9607074108157487 0.8936542149624287 0.9094047390814723 1.0 19.584359720538348 DLLES(ph)SSDSDEKVPLAK ddPTM_KYSE-520_SHP099_60min_R1 1 DLLESSSDSDEKVPLAK 17 1 P54198 P54198 HIRA Protein HIRA 1 DLLES(0.404)S(0.327)S(0.266)DS(0.003)DEKVPLAK 94.281 0.00071349 0.0 360460.0 368070.0 392050.0 334380.0 388510.0 337640.0 320250.0 335870.0 436480.0 396000.0 True False 340464.5652408047 350387.36471566645 417322.1703021787 366159.3746649875 419083.5266804827 335532.66351880104 352623.9953388052 334704.9453626471 357226.2347653915 392491.7480833382 0.8674438810583949 0.8927254303478205 1.0632635522659912 0.9329097400214398 1.067751178787836 0.8548782621731885 0.8984239721236946 0.8527693817694706 0.9101496694130274 1.0 18.58230279691396 -6.314416406222118 24.999487129463517 0.8937410832263384 0.9645105675710475 0.1509898333280998 0.07124296272433717 572.6326662359829 270219.52008636703 0.024999514415515664 0.022047525623147594 4.848234233225859e-07 6.314416406222118 0.07076948434470909 DLLFILTAK ddPTM_KYSE-520_SHP099_60min_R1 1 DLLFILTAK 9 0 Q16531;F5H2L3;F5GY55;F5GWI0;F5GZY8;F5GYG8 Q16531 DDB1 DNA damage-binding protein 1 0 159.37 0.0011274000000000002 20214000.0 35189.0 53388.0 70465.0 55403.0 64071.0 49751.0 48125.0 44837.0 56198.0 29011.0 False True 33236.9960224676 50823.16034297824 75007.28664798637 60668.48446248066 69113.02318587723 49440.48555480356 52989.944654738494 44681.47091203449 45993.8598362937 28753.98511021645 1.1559092033701552 1.767517098870601 2.6085875178858555 2.1099156944657667 2.4035980724397397 1.7194307281336487 1.842873064433454 1.5539227255201895 1.599564709378382 1.0 14.81147429735676 -7.860245611553761 0.8102993390529946 1.0261063494539164 2.010859863609673 0.37382528012394 0.37730411251710055 0.6713416960671063 0.9959431850592164 0.3826203257226079 0.14455962169202433 1.3796038207195544e-08 7.860245611553761 0.9847535141557566 DLLHNEDRHDDYFQER ddPTM_KYSE-520_SHP099_60min_R1 1 DLLHNEDRHDDYFQER 16 1 Q8N684-2;Q8N684;Q8N684-3 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 0 151.04 2.5685999999999998e-05 341450000.0 191950.0 210550.0 205490.0 144870.0 163870.0 168040.0 151840.0 151990.0 209160.0 143210.0 False True 181302.1508571614 200434.8619580069 218736.21419562487 158638.40124324628 176765.63670724214 166991.20002872692 167189.4690155947 151462.7821647326 171181.81649452267 141941.270815694 1.2773039850585541 1.4120971357109016 1.5410332240835474 1.1176340773307076 1.2453434839030462 1.1764809422170062 1.1778777804003504 1.0670806404248836 1.2060045363183802 1.0 17.114934602554108 -5.275120393675667 24.94595240215095 1.1515852909739426 1.4103400189029685 0.6559715790607399 0.08894794616589445 448.1757206736348 817202.2302932643 0.024661838934685012 0.036805487411877724 5.3073729460347285e-06 5.275120393675667 0.2587547279290259 DLLHPS(ph)PEEEK ddPTM_KYSE-520_SHP099_60min_R1 8 DLLHPSPEEEK 11 0 P42677 P42677 RPS27 40S ribosomal protein S27 1 DLLHPS(1)PEEEK;DLLHPS(1)PEEEK;DLLHPS(1)PEEEK;DLLHPS(1)PEEEK;DLLHPS(1)PEEEK;DLLHPS(1)PEEEK;DLLHPS(1)PEEEK;DLLHPS(1)PEEEK 168.76 1.3975e-05 12354360000.0 20236040.0 17780610.0 16595900.0 17065210.0 18306710.0 18000570.0 18257310.0 19552320.0 20438250.0 19080530.0 True False 19113506.521654382 16926402.806360267 17665698.26837887 18687082.427557506 19747343.926068474 17888221.765657578 20102937.06897463 19484497.565465808 16727179.006354833 18911491.3486277 1.0106821386691611 0.8950326811528018 0.9341250746816838 0.988133726900048 1.0441981312860038 0.9458916505257859 1.0630011509078254 1.030299366997288 0.8844981444347396 1.0 24.172759802032886 -5.330407594258438 5.26060183720613 0.9984993301093508 0.9415324160014741 0.12973911021801077 0.05483733938825779 0.3698442719146727 19.622884076280553 0.015297146934578695 0.023182599183618507 4.672963682165758e-06 5.330407594258438 -0.05696691410787669 DLLHPS(ph)PEEEKR ddPTM_KYSE-520_SHP099_60min_R1 2 DLLHPSPEEEKR 12 1 P42677 P42677 RPS27 40S ribosomal protein S27 1 DLLHPS(1)PEEEKR;DLLHPS(1)PEEEKR 93.10600000000001 0.0015443 793970000.0 1310130.0 1206270.0 1126770.0 1063190.0 1205050.0 1234100.0 1203180.0 1232760.0 1362690.0 1113320.0 True False 1237454.4772205935 1148318.9785518167 1199403.3970957424 1164235.2579402719 1299880.5792034063 1226397.5241338487 1324809.1763052107 1228483.8432883471 1115259.8466194347 1103456.8509498534 1.1214344051200509 1.0406559871945569 1.086950881734341 1.0550800032988155 1.1780076204017147 1.1114141192545663 1.2005989859638078 1.1133048312952796 1.010696381702122 1.0 20.073598785586228 -7.77288755281039 6.348773599280726 1.0032128380378669 1.113328449252012 0.4680701254725519 0.046119690308884416 0.14382393124554307 22.809383674826208 0.04227972225020459 0.012477515535250096 1.6869897629242865e-08 7.77288755281039 0.11011561121414504 DLLHPS(ph)PEEEKRK ddPTM_KYSE-520_SHP099_60min_R1 9 DLLHPSPEEEKRK 13 2 P42677 P42677 RPS27 40S ribosomal protein S27 1 DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK;DLLHPS(1)PEEEKRK 174.52 2.7759e-07 38729700000.0 32466300.0 30979600.0 31544100.0 25013700.0 27299500.0 26183200.0 23424700.0 24764000.0 37570500.0 24850200.0 True False 30665329.619035535 29491293.514672376 33577483.1583445 27390994.52735689 29447815.33709257 26019780.936635103 25792697.279041097 24678099.463961076 30748644.275231738 24630046.56116303 1.245037419758232 1.197370595359516 1.3632732311310325 1.1120967416499876 1.1956053458512848 1.056424350316228 1.0472045684116305 1.0019509870872032 1.2484200628234536 1.0 24.55391601935233 -5.7851245436839935 1.4571987558415096 1.0715289656138247 1.2558916675160396 0.45669804425380245 0.08519691292681689 0.35954208628134604 1.5915416149720276 0.031427439871311254 0.0424712143018814 1.6401193647366467e-06 5.7851245436839935 0.18436270190221493 DLLPS(ph)PAGPVPSKDPK ddPTM_KYSE-520_SHP099_60min_R1 2 DLLPSPAGPVPSKDPK 16 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 DLLPS(1)PAGPVPSKDPK;DLLPS(1)PAGPVPSKDPK 119.38 9.9046e-05 1176690000.0 1811060.0 1666930.0 1424320.0 1402610.0 1466190.0 1625730.0 1406680.0 1623550.0 1812660.0 1611040.0 True False 1710596.891541398 1586848.180687061 1516133.9461925752 1535913.6326899258 1581570.8115200577 1615583.216036075 1548880.942273818 1617918.283989418 1483526.6374400528 1596767.4389701548 1.0712874334691207 0.9937879129790552 0.9495020434349634 0.9618893742475879 0.9904828799240181 1.0117836678070387 0.9700103499560202 1.013246039782039 0.9290812182373048 1.0 20.60672277620214 -4.28347935219212 3.8849537765208773 0.9790910797598651 1.0782627067263908 0.5385303691722837 0.025661713094873605 0.16921801935744238 5.107559951545524 0.006325008570529582 0.04587711278031081 5.206197602126353e-05 4.28347935219212 0.0991716269665257 DLLPSDMAVALLEAQAGTGHIIDPATSAR ddPTM_KYSE-520_SHP099_60min_R1 1 DLLPSDMAVALLEAQAGTGHIIDPATSAR 29 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 95.823 0.0054603 25689000.0 26629.0 28772.0 20649.0 30034.0 28067.0 33006.0 20755.0 31638.0 38839.0 24725.0 False True 25151.836286404578 27389.74993234753 21980.067579568153 32888.42232994863 30275.713220614933 32799.99731104596 22853.11794927996 31528.25516236471 31786.81665151448 24505.95573575892 1.02635606452611 1.117677279257491 0.8969275802410347 1.3420583422485366 1.2354430713525213 1.3384500349514807 0.9325536288279853 1.2865548074241766 1.2971057727461484 1.0 14.580844792706099 -5.260909421546754 24.99987416203644 1.2120624365352568 1.02405600937706 0.2808394195918055 0.13936586584247265 63.47109391679616 2994087.6781736356 0.037939634826841866 0.060840747346500405 5.483913280102746e-06 5.260909421546754 -0.1880064271581967 DLLS(ph)DLQDIS(ph)DSER ddPTM_KYSE-520_SHP099_60min_R1 7 DLLSDLQDISDSER 14 0 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;P21127-5;Q9UQ88-9;E7ESP2;J3KS35;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 2 DLLS(1)DLQDIS(0.995)DS(0.005)ER;DLLS(1)DLQDIS(1)DSER;DLLS(1)DLQDIS(0.998)DS(0.002)ER;DLLS(1)DLQDIS(0.994)DS(0.006)ER;DLLS(1)DLQDIS(1)DSER;DLLS(1)DLQDIS(1)DSER;DLLS(1)DLQDIS(0.997)DS(0.003)ER 179.87 6.5963000000000005e-09 1454176000.0 2791210.0 2319270.0 2235299.0 2536320.0 2600600.0 2588790.0 2663480.0 2888530.0 2852220.0 2284120.0 True False 2636376.0171608157 2207848.7879047547 2379389.9501448534 2777371.090227586 2805252.424610083 2572632.4013471105 2932730.551459801 2878510.3636179673 2334328.746615069 2263884.4738184675 1.164536462725976 0.9752479923062514 1.0510209234005499 1.2268166164605683 1.239132321923873 1.1363797186204831 1.295441788384722 1.2714917200535492 1.0311165492812377 1.0 21.110368908544462 -5.2522357341407195 24.19132556233748 1.1893159038625931 1.0547663919587136 0.1745277476556163 0.101960781947337 571.9907387150272 1503443.4197662254 0.0267559797567406 0.04545810325551577 5.5945384867990464e-06 5.2522357341407195 -0.13454951190387954 DLLS(ph)DLQDISDSER ddPTM_KYSE-520_SHP099_60min_R1 2 DLLSDLQDISDSER 14 0 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;P21127-5;Q9UQ88-9;E7ESP2;J3KS35;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DLLS(1)DLQDISDSER;DLLS(1)DLQDISDSER 166.92 3.0396e-08 63139000.0 100289.0 89634.0 80537.0 95065.0 93511.0 89257.0 83425.0 84965.0 113023.0 69068.0 True False 94725.76924883496 85327.84809662314 85728.54388375608 104099.94901766552 100869.78369519081 88699.91395479687 91858.41314953889 84670.27624598013 92500.87227797112 68456.11125409087 1.383744526434435 1.246460637822515 1.252313961649889 1.5206816033016282 1.4734956725892452 1.295719437313148 1.3418584764271069 1.2368548942505162 1.3512434548704133 1.0 16.06289171989917 -9.138652520464385 0.5659595118924952 0.9691305752975155 1.3600781122418948 0.5801266319354503 0.08891461696409168 4.2919206169452675 1.4783525208813197 0.3954953479507755 0.0423330471839055 7.266871481568665e-10 9.138652520464385 0.39094753694437934 DLLSDLQDIS(ph)DSER ddPTM_KYSE-520_SHP099_60min_R1 10 DLLSDLQDISDSER 14 0 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;P21127-5;Q9UQ88-9;E7ESP2;J3KS35;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 DLLSDLQDIS(0.994)DS(0.006)ER;DLLSDLQDIS(1)DSER;DLLSDLQDIS(0.999)DS(0.001)ER;DLLSDLQDIS(0.992)DS(0.008)ER;DLLSDLQDIS(1)DSER;DLLSDLQDIS(0.994)DS(0.006)ER;DLLSDLQDIS(1)DSER;DLLSDLQDIS(0.921)DS(0.079)ER;DLLSDLQDIS(1)DSER;DLLSDLQDIS(0.986)DS(0.014)ER 386.13 1.8575999999999995e-81 15275210000.0 11163680.0 10111580.0 9515410.0 9642730.0 10759170.0 11194060.0 9768020.0 10522420.0 11228560.0 10055390.0 True False 10544408.416155664 9625804.519008996 10128788.553794296 10559172.160007508 11605855.467696723 11124193.719314283 10755466.788288388 10485920.180971282 9189736.55296299 9966307.067575037 1.0580055726419926 0.9658346319998656 1.0163030784740605 1.0594869381820808 1.1645091194767505 1.116180110033573 1.0791827620163188 1.0521369761008854 0.9220804146062701 1.0 23.24862759428311 -7.673205309865453 6.554327261187276 0.9620424925473313 1.065257018756802 0.37724995492743585 0.05302317768988774 0.23673220902717165 14.085441922776678 0.04210669958305155 0.015384996614435925 2.1222409493392593e-08 7.673205309865453 0.10321452620947069 DLLVGPGVELLLT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 DLLVGPGVELLLTPR 15 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;Q5VY93 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 DLLVGPGVELLLT(1)PR;DLLVGPGVELLLT(1)PR;DLLVGPGVELLLT(1)PR;DLLVGPGVELLLT(1)PR;DLLVGPGVELLLT(1)PR;DLLVGPGVELLLT(1)PR;DLLVGPGVELLLT(1)PR;DLLVGPGVELLLT(1)PR 211.17 2.2301e-13 565606800.0 240274.3 299938.0 243963.9 228180.0 248302.5 385971.0 309231.0 455133.0 500803.0 509369.0 True False 226945.805604058 285528.52826388367 259690.20335004173 249866.1585951817 267842.49410203256 383562.0118203271 340491.0872837288 453554.24985184066 409869.7994162669 504856.3869430848 0.44952547194305936 0.565563862612028 0.5143843082237127 0.49492522043372794 0.5305320503595568 0.7597447942429776 0.6744315731953179 0.8983827115630257 0.8118542421500032 1.0 18.945513527031608 -6.937136962409879 0.6116104984875086 0.9783984345152603 0.48177317819538523 0.884518020550614 0.061082758884025916 0.2390801265300751 0.18013843803577662 0.05494762350581788 0.035856423419062707 1.1557476993306734e-07 6.937136962409879 -0.4966252563198751 DLLVSSGSNNSLPCGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 DLLVSSGSNNSLPCGSPK 18 0 Q5THK1-3;Q5THK1-2;Q5THK1-4;Q5THK1 Q5THK1-3 PRR14L Protein PRR14L 1 DLLVSSGSNNSLPCGS(1)PK;DLLVSSGSNNSLPCGS(1)PK;DLLVSSGSNNSLPCGS(1)PK;DLLVSSGSNNSLPCGS(1)PK 410.88 1.1205999999999998e-101 4645190000.0 2182890.0 2243040.0 1807240.0 1564180.0 1618920.0 2087850.0 1712300.0 2156220.0 2549440.0 2097780.0 True False 2061800.7402166696 2135280.9915283206 1923737.5820862374 1712839.1969121345 1746319.7936052268 2074818.953701365 1885395.9944375833 2148740.576085531 2086525.9621524028 2079195.3012481413 0.9916339936796559 1.026974709997907 0.92523178603348 0.8237990899094072 0.8399017603381994 0.9978951724524632 0.9067911962410552 1.0334481685273345 1.0035257202148644 1.0 20.987593847919076 -7.262457969212538 24.9925830364774 1.013865211456961 0.9288648317712144 0.2682385714932619 0.062021794449942574 136.4982284067692 3349074.451256588 0.03547086243846239 0.018555072604195068 5.4643943143853036e-08 7.262457969212538 -0.0850003796857467 DLMPHDLAR ddPTM_KYSE-520_SHP099_60min_R1 1 DLMPHDLAR 9 0 C9K0M0;C9JEY0;C9JE81;B5MD38;P55084-2;P55084 C9K0M0 HADHB Trifunctional enzyme subunit beta, mitochondrial;3-ketoacyl-CoA thiolase 0 98.044 0.0020339000000000004 0.0 97736.0 93821.0 75033.0 60639.0 108250.0 94615.0 70239.0 80439.0 82887.0 74892.0 False True 92314.38924811441 89313.69833180789 79869.74723704468 66402.11232821987 116768.65914175245 94024.47268934785 77339.44358658037 80159.97588360366 67836.81021123305 74228.51514509434 1.243651298529516 1.2032262555330195 1.0759981804960457 0.8945633924971257 1.5730970626787424 1.266689391611275 1.0419101531992807 1.0799081151888208 0.913891515661233 1.0 16.179685889247626 -6.86377420288765 5.556351359679237 1.010252027738966 1.204940514082137 0.2657719927374982 0.16381958271581237 0.3397641009254878 15.59474480957282 0.07410908232025379 0.04966818140642492 1.368440116042482e-07 6.86377420288765 0.19468848634317104 DLNES(ph)PVKSFVSISEATDCLVDFKK ddPTM_KYSE-520_SHP099_60min_R1 1 DLNESPVKSFVSISEATDCLVDFKK 25 2 Q96RL1-2;Q96RL1;Q96RL1-3;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 DLNES(0.999)PVKS(0.001)FVSISEATDCLVDFKK 159.75 2.7561000000000004e-10 80413000.0 105730.0 155000.0 176520.0 106730.0 98974.0 99635.0 66543.0 65588.0 184000.0 62794.0 True False 99864.94613247048 147553.56734025668 187898.76164198606 116873.58711045528 106762.69071497291 99013.14100727336 73269.81583709632 65360.490536354206 150590.23826253685 62237.69401299274 1.6045733653246002 2.370807107818831 3.0190508279879444 1.8778585705000053 1.7154024166236803 1.5908870432539384 1.177257882044931 1.0501753249840773 2.419598615448375 1.0 15.925500987147803 -5.696509516458162 2.4675230159285406 1.4589790413509052 2.340291745456077 0.35890194854082225 0.498612711469476 0.30653182202416657 3.8109367580529634 0.16213553139298972 0.21443874900678384 2.0113631238146798e-06 5.696509516458162 0.8813127041051718 DLNFLEDNPS(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 5 DLNFLEDNPSLK 12 0 Q9H0K1 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 1 DLNFLEDNPS(1)LK;DLNFLEDNPS(1)LK;DLNFLEDNPS(1)LK;DLNFLEDNPS(1)LK;DLNFLEDNPS(1)LK 217.48 8.8797e-11 773873000.0 1508020.0 1381040.0 1231356.0 1355640.0 1288760.0 1273964.0 1187180.0 1391800.0 1296320.0 1515350.0 True False 1424367.1244366588 1314692.7654166978 1310731.177999261 1484479.618011972 1390178.0799586598 1266012.7181230502 1307191.7401602583 1386972.1706485632 1060940.9655678896 1501925.17792446 0.948360907302333 0.8753383888493684 0.8727007158975697 0.9883845346167001 0.9255974268170764 0.8429266229310958 0.8703441152552568 0.9234628935146073 0.7063873628072637 1.0 20.5183815125851 -6.250882932307833 23.711752899024166 0.8639481251591261 0.9204205362241102 0.10948551005448859 0.07556221195348362 805.182871760453 1808590.8066548393 0.02410879635712656 0.023846459239309437 5.611992315691089e-07 6.250882932307833 0.05647241106498413 DLNFLEDNPS(ph)LKDIMLANQPSPR ddPTM_KYSE-520_SHP099_60min_R1 3 DLNFLEDNPSLKDIMLANQPSPR 23 1 Q9H0K1 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 1 DLNFLEDNPS(1)LKDIMLANQPSPR;DLNFLEDNPS(1)LKDIMLANQPSPR;DLNFLEDNPS(1)LKDIMLANQPSPR 221.69 2.9604e-21 1478590000.0 1246900.0 1281590.0 1154280.0 1051930.0 971690.0 1087270.0 801150.0 1047230.0 1310790.0 1266320.0 True False 1177731.9713664746 1220020.4926941902 1228686.7357132987 1151905.1109257136 1048156.4748401812 1080483.944627672 882138.0604705184 1043597.4035553184 1072783.5783269051 1255101.3899820526 0.9383560410074246 0.9720493518946991 0.9789541669863566 0.9177785317743814 0.8351169739802211 0.8608738331834072 0.702842071175726 0.8314845413168105 0.8547385788029805 1.0 20.25937248243722 -5.636039958592641 2.7720062178316907 0.831283923577961 0.963591124452337 0.35348950362590204 0.0688890209041996 0.2566794691643741 3.983700434419385 0.021222668590703913 0.02876613856841159 2.3118520713663012e-06 5.636039958592641 0.13230720087437597 DLNYCFSGMS(ph)DHR ddPTM_KYSE-520_SHP099_60min_R1 1 DLNYCFSGMSDHR 13 0 P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;H0YBG7;P55795 P31943;P55795 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 1 DLNYCFSGMS(1)DHR 120.9 0.0030414 0.0 97970.0 94812.0 81484.0 111150.0 94468.0 109890.0 88398.0 109740.0 102450.0 102400.0 True False 92535.40880164686 90257.08920428652 86736.58901900971 121713.662581534 101902.0941506057 109204.13574837417 97334.13252134183 109359.33755350857 83847.66255433092 101492.81566599439 0.9117434391235562 0.8892953517154963 0.854608165610989 1.1992342687790332 1.0040325857739352 1.0759789747853403 0.9590248519822477 1.077508164847868 0.8261438211574265 1.0 16.631018081946987 DLPDGHAAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 DLPDGHAASPR 11 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 DLPDGHAAS(1)PR 48.998000000000005 0.052303999999999996 746730000.0 1747300.0 1774700.0 1830500.0 1588300.0 1691700.0 1661500.0 1602600.0 1785500.0 2098400.0 1730500.0 True False 1650373.7858438059 1689440.7481209894 1948496.9589035523 1739251.5544601935 1824827.1655436745 1651129.9621978668 1764606.447868756 1779306.5172388316 1717383.4563592768 1715169.1163086274 0.9622221914744632 0.9849995152413831 1.1360378054713876 1.014040853419397 1.0639342489276231 0.9626630671565581 1.0288235900996907 1.0373942139701304 1.001291033070497 1.0 20.709919402999798 -9.286989836626542 13.274161002958389 0.9999999993023316 1.023591554434693 0.014688181270341216 0.04903665351841519 0.0 0.0 0.04764573620545893 0.011555788410907224 5.164284546059927e-10 9.286989836626542 0.02359155513236133 DLPEHAVLK ddPTM_KYSE-520_SHP099_60min_R1 6 DLPEHAVLK 9 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;Q5RI18;A0A1W2PP35;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7;A0A1W2PQD4 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ;;;;; 132.01 0.00092223 5540510000.0 11512890.0 10173670.0 7283860.0 6475800.0 10136670.0 10423470.0 7875760.0 9493700.0 8984430.0 9289090.0 False True 10874247.04132277 9684911.622210003 7753389.270188065 7091258.084979737 10934368.259237211 10358413.25734013 8671918.680810448 9460768.570546232 7353083.991049372 9206795.88940266 1.181110906763927 1.0519307410037917 0.8421376299992144 0.7702199733940035 1.1876409980830624 1.1250834037999062 0.9419040874786989 1.027585349365234 0.7986583040809045 1.0 23.134267732292578 -4.436650774361859 4.1009175023725355 0.9677931936546444 1.1706857926843848 0.21853714914292932 0.12755515108664583 0.38660329887636163 11.150673414236657 0.034234357636730786 0.15801370076502 3.65888892566829e-05 4.436650774361859 0.20289259902974033 DLPHSVIDNDNYLNFSSLS(ph)SGALPYK ddPTM_KYSE-520_SHP099_60min_R1 3 DLPHSVIDNDNYLNFSSLSSGALPYK 26 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 DLPHSVIDNDNYLNFS(0.001)S(0.004)LS(0.827)S(0.167)GALPYK;DLPHSVIDNDNYLNFS(0.037)S(0.14)LS(0.799)S(0.025)GALPYK;DLPHSVIDNDNYLNFS(0.018)S(0.143)LS(0.833)S(0.006)GALPYK 238.0 4.0466999999999995e-29 798900000.0 307046.0 299265.0 267836.0 281892.0 236797.0 227131.0 226608.0 256447.0 344601.0 256020.0 True False 290013.5462989738 284887.86019407684 285101.1371127518 308682.9309260798 255431.5767093724 225713.3911790333 249515.74812095545 255557.44521217965 282030.1450842851 253751.8619805458 1.1429021408371303 1.1227025408622149 1.1235430348669102 1.2164755305312611 1.0066195168607488 0.8895043741446038 0.9833060777307119 1.0071155467295538 1.111440692032862 1.0 17.953058882981892 -5.83446786634147 7.868399877341889 0.9928860864278672 1.1470971672976962 0.6380859036822615 0.055844058090885676 0.16519400180748375 15.476952902054974 0.01831833793848453 0.02084187646580332 1.4639698533801157e-06 5.83446786634147 0.15421108086982893 DLPLLLFR ddPTM_KYSE-520_SHP099_60min_R1 2 DLPLLLFR 8 0 A0A286YFA2;A0A286YF22;A0A2C9F2M7;O43175 A0A286YFA2 PHGDH D-3-phosphoglycerate dehydrogenase 0 ; 107.43 0.010971999999999999 93853000.0 110888.0 156075.0 131627.0 144060.0 168038.0 142928.0 123982.0 123660.0 126521.0 105740.0 False True 104736.82159025235 148576.92272664892 140111.8870306462 157751.4190867816 181261.63459456636 142035.93333555033 136515.31050771516 123231.05232246086 103547.97573486084 104803.22586447527 0.9993663909323861 1.4176750906387074 1.3369043354813315 1.5052153002501611 1.7295425126413775 1.3552629908474572 1.3025869135387864 1.1758326263908638 0.9880227910996018 1.0 16.67732359844057 -7.386425289781947 1.6710564008957993 0.9884958228504722 1.4068985750773186 0.4558393253971682 0.1705321891863962 0.36848468944049106 1.8333291595728751 0.1500504560746654 0.05326847700456592 4.107472932719582e-08 7.386425289781947 0.4184027522268464 DLPS(ph)PDSR ddPTM_KYSE-520_SHP099_60min_R1 1 DLPSPDSR 8 0 Q9UGU0;Q9UGU0-2 Q9UGU0 TCF20 Transcription factor 20 1 DLPS(1)PDSR 88.134 0.012162000000000001 266140000.0 1639700.0 1507900.0 1653100.0 1416800.0 1483500.0 1593900.0 1468200.0 1622900.0 1861500.0 1584200.0 True False 1548742.5723390882 1435458.2205959577 1759661.4710535167 1551452.246023546 1600243.0100396296 1583951.8788728134 1616619.984251159 1617270.5386877067 1523498.5245962634 1570165.2204889501 0.9863564369721608 0.9142083914894991 1.1206855483052651 0.9880821621691652 1.0191558118586483 1.0087803870598855 1.0295859080025622 1.0300002302841023 0.9702791175834637 1.0 20.582484943879784 -4.708130190344373 24.99999968719596 1.02054814436178 0.9502824417167911 0.3196264950433324 0.04116427115109002 106.4222398659046 49906.24118560154 0.009825927385531289 0.025996921485213615 1.9582575501313325e-05 4.708130190344373 -0.07026570264498899 DLPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 DLPSPK 6 0 C9JA69;Q8WY36-2;Q8WY36;C9JYU6;C9JZA0;C9J8D0;Q8WY36-3 C9JA69 BBX HMG box transcription factor BBX 1 DLPS(1)PK;DLPS(1)PK;DLPS(1)PK 78.516 0.027583999999999997 10202800000.0 41328500.0 34524600.0 33193000.0 33956900.0 36001700.0 35001400.0 33956700.0 38957200.0 43832100.0 37187600.0 True False 39035925.71867776 32865986.393518917 35332673.89067779 37184153.566485725 38834828.96834765 34782943.27948992 37389374.62145576 38822066.56587884 35873295.557322435 36858146.79551501 1.0590854156408034 0.8916885207456533 0.9586123276001808 1.008844904025679 1.053629450872803 0.9436975622366992 1.0144127654840582 1.0532831935707305 0.9732799577890766 1.0 25.135480199202604 -5.26396914587968 23.088665798088574 1.008602773951262 0.961984725778121 0.09981198131000557 0.04896266484719059 140.54309477367806 1282731.439736845 0.013207227573002639 0.020710847071910787 5.445413379923744e-06 5.26396914587968 -0.04661804817314097 DLPSWMK ddPTM_KYSE-520_SHP099_60min_R1 1 DLPSWMK 7 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 129.39 0.013966 0.0 443100.0 598960.0 284460.0 283730.0 510610.0 561840.0 368160.0 393700.0 387180.0 426760.0 False True 418520.3597020486 570185.0625427109 302796.7467520926 310695.6138934651 550792.1020265146 558333.3481560334 405377.20569534623 392334.3465902712 316877.8720135267 422979.2384142561 0.9894583981735752 1.3480213938639818 0.7158666886045609 0.734541049953797 1.3021729011840566 1.320001781291248 0.9583855869973674 0.9275498912455558 0.7491570347554123 1.0 18.69022732602818 -6.991535094575387 24.976669402563225 0.8916055670651444 1.0670489972162567 0.12015039927332039 0.21713075109051408 447.180488076992 1319452.8647790267 0.09814464782388564 0.06605304594993122 1.019682357972419e-07 6.991535094575387 0.1754434301511123 DLPTIPGVTSPSSDEPPMEAS(ph)QSHLRNSPEDKR ddPTM_KYSE-520_SHP099_60min_R1 1 DLPTIPGVTSPSSDEPPMEASQSHLRNSPEDKR 33 2 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 DLPTIPGVTSPSSDEPPMEAS(0.333)QS(0.333)HLRNS(0.333)PEDKR 112.34 0.00015981 1023200000.0 215170.0 333830.0 308400.0 784590.0 241290.0 233750.0 226390.0 168450.0 305330.0 200310.0 True False 203234.09116923908 317792.305710954 328279.957457447 859157.1977044139 260278.15024769946 232291.07954484003 249275.71055348072 167865.68626652544 249889.76874293658 198535.40923882203 1.0236667199490088 1.6006832581117838 1.653508352570764 4.3274758945942855 1.3109910783451526 1.170023425218887 1.2555730562583032 0.8455201362322053 1.2586659966653073 1.0 17.599036812673763 -5.973839505423827 24.999985389289524 1.1206348099927423 2.1692910851379095 0.2709982801066677 0.8178939149885509 315.19614698686786 301212.208541841 0.26498935904752835 0.3004617558391396 1.0620879818659829e-06 5.973839505423827 1.0486562751451671 DLQEQDADAGS(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 5 DLQEQDADAGSER 13 0 Q6P158-2;Q6P158;A0A087WW12;A0A087WZ11;Q6P158-3 Q6P158-2 DHX57 Putative ATP-dependent RNA helicase DHX57 1 DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER;DLQEQDADAGS(1)ER 232.26 4.0243000000000003e-14 2545920000.0 3118970.0 2992460.0 2713850.0 2539430.0 2659070.0 2674080.0 2624540.0 2499424.0 3085830.0 2571200.0 True False 2945954.5165874497 2848697.729825965 2888789.1133135264 2780776.6636925293 2868323.6809612946 2657390.0748203886 2889854.1162420255 2490754.0815139497 2525521.0594439334 2548421.168363329 1.1559920130782104 1.1178284677549915 1.1335603192971402 1.0911762538365768 1.1255296873881393 1.0427593789479634 1.133978226251344 0.9773714456757495 0.9910140014516899 1.0 21.28117229562208 -7.26457551415939 24.999798388268417 0.9881445334772508 1.1120510454591137 0.7921262955440934 0.029310835417865666 121.16530718351001 965862.1047093441 0.01524360663073559 0.007809325037967347 5.437815719684263e-08 7.26457551415939 0.12390651198186287 DLQHPNEFIR ddPTM_KYSE-520_SHP099_60min_R1 2 DLQHPNEFIR 10 0 P53618;E9PP73;E9PP63;E9PKQ1 P53618 COPB1 Coatomer subunit beta 0 ; 118.9 0.00041001 0.0 686460.0 661280.0 433460.0 423460.0 636420.0 592710.0 431920.0 504230.0 613380.0 603800.0 False True 648380.6953759157 629511.1161984836 461401.5251605214 463705.51108210866 686502.6332655352 589010.6770353887 475582.6887329793 502480.9438181663 502005.654051493 598450.8017492912 1.083431910326927 1.0519011994944314 0.7709932442430182 0.7748431612534937 1.1471329493733915 0.9842257296902122 0.7946897010461604 0.8396361778602319 0.8388419776264215 1.0 19.190873123460612 -6.7483118248021725 24.93942501431062 0.8549283066613622 0.9628388830269812 0.13125123801609562 0.12418161617643125 473.79286465960575 900101.1184508748 0.05094710607497114 0.03921673177314836 1.7852053315442034e-07 6.7483118248021725 0.10791057636561896 DLQS(ph)PDFTTGFHSDK ddPTM_KYSE-520_SHP099_60min_R1 4 DLQSPDFTTGFHSDK 15 0 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 DLQS(1)PDFTTGFHSDK;DLQS(1)PDFTTGFHSDK;DLQS(1)PDFTTGFHSDK;DLQS(1)PDFTTGFHSDK 223.93 1.2359e-14 2648230000.0 2294470.0 2076190.0 1857460.0 2314720.0 2230140.0 2239010.0 2189730.0 2207470.0 2349210.0 2253810.0 True False 2167191.175187452 1976446.7159752746 1977194.8436410786 2534710.2928540576 2405639.3302391497 2225035.5080714123 2411089.2781053614 2199812.8017973737 1922652.6827648585 2233842.9968376476 0.9701627098482072 0.8847742293318028 0.8851091354406311 1.1346859633565718 1.076906180803533 0.9960572480793397 1.0793458992053755 0.9847660757320684 0.8606928443434353 1.0 21.091096360497477 -5.225228790033227 24.992442647232707 1.0222682896185413 0.9104912187349078 0.30764733928352284 0.07241763377508399 728.3744787515851 502720.8288686699 0.020529752676848523 0.035556918513723064 5.953484262785131e-06 5.225228790033227 -0.11177707088363353 DLQS(ph)PDFTTGFHSDKIEAK ddPTM_KYSE-520_SHP099_60min_R1 8 DLQSPDFTTGFHSDKIEAK 19 1 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 DLQS(0.999)PDFTTGFHSDKIEAK;DLQS(1)PDFTTGFHSDKIEAK;DLQS(1)PDFTTGFHSDKIEAK;DLQS(1)PDFTTGFHSDKIEAK;DLQS(1)PDFTTGFHSDKIEAK;DLQS(1)PDFTTGFHSDKIEAK;DLQS(1)PDFTTGFHSDKIEAK;DLQS(1)PDFTTGFHSDKIEAK 349.68 1.8681999999999999e-65 13713220000.0 6363430.0 6741450.0 6036323.0 6670720.0 6195760.0 5898634.0 5525900.0 5868632.0 7723950.0 5368119.0 True False 6010437.852716786 6417580.622877244 6425434.039038291 7304703.223174906 6683331.062947853 5861818.437218815 6084511.899586902 5848275.085341011 6321475.384934344 5320561.6419933885 1.1296622907774319 1.2061848080521156 1.207660858268142 1.3729195740392068 1.256132625209825 1.1017292593611678 1.143584514003919 1.0991837852572854 1.1881218206440995 1.0 22.343147114928527 -6.262477423087379 24.867387092715763 1.115039148209921 1.2391358756095885 0.4374204854805739 0.07215701724823108 91.95075476347972 2202760.857414799 0.025497477200709454 0.023750279153892814 5.464149546683561e-07 6.262477423087379 0.1240967273996676 DLQS(ph)SPPSLPLGFLGEGDAVTK ddPTM_KYSE-520_SHP099_60min_R1 1 DLQSSPPSLPLGFLGEGDAVTK 22 0 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 DLQS(0.483)S(0.416)PPS(0.101)LPLGFLGEGDAVTK 91.12799999999999 0.0017349 69265000.0 52275.0 67211.0 38723.0 40329.0 43258.0 54526.0 40044.0 57207.0 59311.0 47558.0 True False 49375.201542371055 63982.08267423225 41219.14653899064 44161.85603464404 46662.158495648284 54185.68300860725 44092.03831177865 57008.562269214184 48541.61750863761 47136.67311956414 1.0474901658233027 1.3573737482901906 0.8744602410619127 0.936889540817309 0.9899332177578118 1.1495440688222311 0.9354083645219795 1.2094311816323902 1.0298057604852546 1.0 15.52456231710907 -4.762986439082172 24.99999307863777 1.0213437073563743 1.2024319218703527 0.287825593562276 0.11723147531919903 48.728204160377146 787493.3026215866 0.030126039353638095 0.0685790431218982 1.7258917824083706e-05 4.762986439082172 0.1810882145139785 DLQSS(ph)PPSLPLGFLGEGDAVTK ddPTM_KYSE-520_SHP099_60min_R1 2 DLQSSPPSLPLGFLGEGDAVTK 22 0 Q9UN79 Q9UN79 SOX13 Transcription factor SOX-13 1 DLQS(0.197)S(0.679)PPS(0.124)LPLGFLGEGDAVTK;DLQS(0.062)S(0.469)PPS(0.469)LPLGFLGEGDAVTK 113.42 0.00011042 90630000.0 78034.0 86420.0 71707.0 61094.0 58171.0 81240.0 72393.0 78298.0 86788.0 78472.0 True False 73705.29846307763 82268.25348093544 76329.34795525651 66900.3553914191 62748.72675228527 80732.95102555206 79711.19092759445 78026.40251289062 71029.48694744045 77776.79913029223 0.9476514755975751 1.0577479968431087 0.9813896792974093 0.860158249497349 0.8067794953501258 1.0380081454664605 1.0248710646225194 1.0032092267281436 0.9132477517935826 1.0 16.247052242068087 DLRAS(ph)PKPTSK ddPTM_KYSE-520_SHP099_60min_R1 4 DLRASPKPTSK 11 2 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 DLRAS(0.999)PKPT(0.001)SK;DLRAS(0.999)PKPT(0.001)SK;DLRAS(1)PKPTSK;DLRAS(1)PKPTSK 101.39 0.00089096 3625070000.0 9698300.0 8863300.0 8510600.0 7888900.0 8450800.0 7908700.0 7803900.0 7681100.0 9767000.0 7644500.0 True False 9160315.965918256 8437493.763915475 9059206.893441467 8638658.684115725 9115829.88152538 7859338.869716682 8592794.370724445 7654456.056882225 7993559.006033684 7576775.677330998 1.2089992308106814 1.113599520856829 1.1956546266171986 1.1401497222574215 1.203127856721308 1.037293329566439 1.1340964463859318 1.0102524322824602 1.0550080068952896 1.0 22.853152604533093 -6.827864278312025 0.7608955778073302 1.0093008900025893 1.1733685222516197 0.6474720074934972 0.04509013341555855 0.407365300438871 0.45827105353432346 0.03573469071229608 0.021137645739032443 1.48640008569552e-07 6.827864278312025 0.16406763224903043 DLRS(ph)PLTATPTFVTDSESTR ddPTM_KYSE-520_SHP099_60min_R1 1 DLRSPLTATPTFVTDSESTR 20 1 A0A087WUK4;P13056-2;P13056-3;P13056 A0A087WUK4 NR2C1 Nuclear receptor subfamily 2 group C member 1 1 DLRS(0.972)PLT(0.027)AT(0.001)PTFVTDSESTR 107.75 8.142399999999999e-07 0.0 92653.0 75832.0 78335.0 75027.0 93586.0 104230.0 92000.0 97615.0 121370.0 85129.0 True False 87513.35339082355 72188.9168938475 83384.59944043148 82157.54352230989 100950.68576849923 103579.4619078447 101300.25783347418 97276.39634851232 99332.26748871776 84374.82328935985 1.037197471699588 0.8555741402417959 0.9882639890630356 0.9737210736495898 1.1964550778647935 1.2276110084713703 1.2005981628674858 1.1529078527952241 1.1772737840061838 1.0 16.36452495509117 -5.735824188713539 7.35745567161204 1.1723762436976937 0.9567574223515435 0.6328338035594965 0.07245332240015677 0.10269644751949714 20.826184668886466 0.020612286086567268 0.026065926262881067 1.8372819621280288e-06 5.735824188713539 -0.21561882134615018 DLS(ph)FLLDK ddPTM_KYSE-520_SHP099_60min_R1 2 DLSFLLDK 8 0 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 DLS(1)FLLDK;DLS(1)FLLDK 72.434 0.03708 8773600.0 29123.7 29543.0 25395.5 27056.0 26119.0 26342.4 24939.3 27813.1 30299.9 31988.9 True False 27508.15030434339 28123.709935052953 27032.534564236674 29627.39410531699 28174.41670321878 26177.987310382854 27460.407828112602 27716.622847726336 24798.201958320857 31705.503232987594 0.867614372880317 0.8870292872624078 0.8526133260080544 0.9344558857054046 0.8886285922093506 0.8256606784637405 0.8661085624889803 0.8741896523152777 0.7821418816819119 1.0 14.952445655177797 DLS(ph)FLLDKK ddPTM_KYSE-520_SHP099_60min_R1 2 DLSFLLDKK 9 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 DLS(1)FLLDKK;DLS(1)FLLDKK 137.16 0.00030099 270540000.0 403760.0 337440.0 370130.0 329400.0 334160.0 319690.0 327020.0 364050.0 438330.0 393400.0 True False 381362.62792439485 321228.87589223386 393989.1720289388 360706.07696227846 360456.4908896814 317694.69612701546 360078.3730076379 362787.1955199088 358740.3214000962 389914.78206056834 0.9780666070391631 0.8238438004187669 1.0104494370458044 0.9250895158579736 0.9244494117016806 0.8147798204728376 0.9234796667742242 0.930426883542862 0.9200480153747297 1.0 18.572799324225517 -8.584350767563253 1.2974195010656262 0.9999855882856574 0.9132927145957207 0.16312989165720027 0.05652605119584642 5.773787050763282 11.060541678081442 0.05332447702813117 0.015818308494925673 2.604049482138907e-09 8.584350767563253 -0.08669287368993672 DLS(ph)LEEIQK ddPTM_KYSE-520_SHP099_60min_R1 11 DLSLEEIQK 9 0 P16949;P16949-2;A2A2D0;E5RGX5;Q93045;Q93045-2 P16949 STMN1;STMN2 Stathmin;Stathmin-2 1 DLS(1)LEEIQK;DLS(1)LEEIQK;DLS(1)LEEIQK;DLS(1)LEEIQK;DLS(1)LEEIQK;DLS(1)LEEIQK;DLS(1)LEEIQK;DLS(1)LEEIQK;DLS(1)LEEIQK;DLS(1)LEEIQK;DLS(1)LEEIQK 247.0 1.3772999999999998e-13 8990950000.0 12071910.0 10380060.0 9752360.0 9653370.0 10689500.0 10737580.0 10117800.0 10863430.0 12267470.0 10740960.0 True False 11402257.087544044 9881386.336812286 10381012.729927694 10570823.382408485 11530702.8350648 10670562.780316941 11140605.964212231 10825747.296873624 10040006.68575284 10645803.450740425 1.0710565097602855 0.9281954511498168 0.9751272205956129 0.9929568426959146 1.0831218976020855 1.002325736116685 1.0464786444500243 1.016902796201886 0.9430952517777839 1.0 23.34378149992538 -2.272626765277373 14.26749385843527 1.0061931188555748 1.0801404978261775 0.0 0.048084815326000674 0.0 0.0 0.011027655020433642 0.0 0.005337934430187462 2.272626765277373 0.07394737897060266 DLS(ph)LEEIQKK ddPTM_KYSE-520_SHP099_60min_R1 7 DLSLEEIQKK 10 1 P16949;P16949-2;A2A2D0;E5RGX5;Q93045;Q93045-2 P16949 STMN1;STMN2 Stathmin;Stathmin-2 1 DLS(1)LEEIQKK;DLS(1)LEEIQKK;DLS(1)LEEIQKK;DLS(1)LEEIQKK;DLS(1)LEEIQKK;DLS(1)LEEIQKK;DLS(1)LEEIQKK 191.06 2.0145e-06 3349220000.0 3792320.0 3531720.0 3668330.0 3389060.0 3477210.0 3662670.0 3411120.0 3460200.0 4263330.0 3589230.0 True False 3581952.4497975027 3362050.869980202 3904796.4213355193 3711155.24344196 3750846.6443814593 3639809.917931552 3755949.2989230435 3448197.3738167514 3489216.7418033737 3557432.2145786863 1.0068926781284349 0.9450779852395238 1.097644645295925 1.043211794235545 1.0543691118020866 1.023156506824016 1.0558034763194688 0.9692939080288641 0.9808245192991284 1.0 21.76240483637168 -7.269370130408042 24.904983387900565 0.9812944073477116 1.0323818708448038 0.2602190833213618 0.03776166721004372 819.9974856956668 2575026.9600772406 0.02100514715671095 0.010404082470917847 5.378112338837647e-08 7.269370130408042 0.051087463497092256 DLS(ph)MSEEDQMMR ddPTM_KYSE-520_SHP099_60min_R1 1 DLSMSEEDQMMR 12 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 DLS(0.998)MS(0.002)EEDQMMR 78.763 0.01975 0.0 83513.0 88129.0 82383.0 75196.0 88170.0 66165.0 94928.0 96183.0 114930.0 70613.0 True False 78880.36741096196 83895.15055567407 87693.53999746045 82342.60523149822 95108.47738132399 65752.03969233949 104524.24864800036 95849.36362228102 94061.60914952899 69987.42375608279 1.1270648807687575 1.1987175131358156 1.2529899700707126 1.1765343087706042 1.3589366814356825 0.9394836409680647 1.4934718702074796 1.3695226724780036 1.3439787336271805 1.0 16.094808082824475 -6.786189023533414 24.99996832601214 1.3325367138454431 1.1885615512404213 0.1233467571007465 0.15402209247494578 411.5810673549897 415739.94379030843 0.060709792206385005 0.040951255127011046 1.6361042638843266e-07 6.786189023533414 -0.14397516260502186 DLS(ph)PQHMVVR ddPTM_KYSE-520_SHP099_60min_R1 2 DLSPQHMVVR 10 0 A0A2R8Y5E8;D6RB22;A0A2R8Y3N3;A0A2R8Y5P7;P49590-2;P49590 A0A2R8Y5E8 HARS2 Probable histidine--tRNA ligase, mitochondrial 1 DLS(1)PQHMVVR;DLS(1)PQHMVVR 170.66 2.9256e-05 791090000.0 423580.0 415190.0 329750.0 333270.0 400190.0 417390.0 351970.0 357960.0 474550.0 354730.0 True False 400083.17301420384 395243.64918710437 351006.2126186547 364943.8805987206 431682.6762303734 414784.91418704065 387550.56249617244 356718.3203084925 388383.6824319931 351587.3681757637 1.137933865741719 1.124169082745647 0.9983470522273756 1.0379891703511936 1.2278105395827783 1.1797491938893652 1.1022880728252735 1.014593675988279 1.1046576685822067 1.0 18.423523712729413 -7.12916889569607 6.059363598863943 1.0453353308140623 1.115969252804879 0.21723719073145997 0.06602627299112229 0.4452429948990434 19.961019885662928 0.03468253070717091 0.01984714431313593 7.427302363770557e-08 7.12916889569607 0.07063392199081675 DLS(ph)PTLIDNSAAK ddPTM_KYSE-520_SHP099_60min_R1 6 DLSPTLIDNSAAK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 DLS(0.999)PT(0.001)LIDNSAAK;DLS(1)PTLIDNSAAK;DLS(0.846)PT(0.154)LIDNSAAK;DLS(1)PTLIDNSAAK;DLS(1)PTLIDNSAAK;DLS(0.977)PT(0.023)LIDNSAAK 354.7 6.612499999999999e-53 11427270000.0 12793800.0 11598300.0 9877920.0 8700320.0 8887390.0 12272300.0 10489970.0 11284440.0 13038200.0 11696870.0 True False 12084102.410191989 11041100.258596782 10514666.528430818 9527195.796953412 9586777.03066809 12195704.023521459 11550398.539841404 11245296.911448095 10670791.546275029 11593244.83182715 1.0423399648230733 0.9523735950340187 0.9069649335417043 0.8217885445495142 0.826927850634995 1.0519663994363653 0.9963042019204046 0.9699870117964017 0.9204318291441846 1.0 23.466781082807845 -6.268046713035016 24.999517097352424 0.9863974674770503 0.9073506520310795 0.2579450558756027 0.06575808887378233 856.5621215005942 3240882.953184021 0.025212120513998872 0.022733540043167706 5.394525954751415e-07 6.268046713035016 -0.07904681544597081 DLS(ph)T(ph)SPKPSPIPS(ph)PVLGR ddPTM_KYSE-520_SHP099_60min_R1 1 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 3 DLS(0.917)T(0.788)S(0.272)PKPS(0.023)PIPS(0.999)PVLGR 135.21 0.00090942 0.0 404230.0 393610.0 332730.0 337360.0 360720.0 325160.0 304100.0 336540.0 406520.0 303250.0 True False 381806.55608747306 374700.3847793451 354178.3081868235 369422.5929690171 389106.6117839531 323130.55582802225 334841.3957299941 335372.6212890268 332706.21553525224 300563.44092493015 1.2703027184960745 1.2466598852683872 1.1783811999786242 1.2291002253374037 1.2945906214892509 1.0750827007890442 1.1140456560504488 1.1158130884347666 1.1069417308752136 1.0 18.197310011954862 -6.270725917288519 24.96181982770147 1.0915942596832444 1.2395136261995592 0.7834340136662448 0.04226870252845801 331.0974122612137 889973.1430331548 0.014770162795951109 0.01320668273589271 5.361349048450771e-07 6.270725917288519 0.14791936651631477 DLS(ph)TPGLEK ddPTM_KYSE-520_SHP099_60min_R1 2 DLSTPGLEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DLS(0.978)T(0.022)PGLEK;DLS(0.887)T(0.113)PGLEK 96.229 0.0031365 705240000.0 1440720.0 1146460.0 1011100.0 1154210.0 1243900.0 1499850.0 1190430.0 1496660.0 1787830.0 1428470.0 True False 1360800.3895958844 1091382.3407284576 1076277.1238171998 1263905.7713741106 1341787.853177143 1490488.8798088916 1310770.2818772015 1491468.4357830698 1463205.1395266913 1415814.8671328446 0.9611428875242922 0.77085102442709 0.7601821034672139 0.8927055370831329 0.9477141993108088 1.0527427804365896 0.9258062705130593 1.053434647711696 1.0334720827517627 1.0 20.43320119934181 -5.762985053239323 2.3081756061378584 1.010214763427233 0.8256935959454608 0.6172604960132678 0.06242197573042554 0.18979158605131208 2.0746643040515487 0.02073933656695474 0.026448533218027585 1.7258972897742278e-06 5.762985053239323 -0.18452116748177216 DLS(ph)TSPKPS(ph)PIPS(ph)PVLGR ddPTM_KYSE-520_SHP099_60min_R1 2 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 3 DLS(0.664)T(0.168)S(0.168)PKPS(1)PIPS(1)PVLGR;DLS(0.333)T(0.333)S(0.333)PKPS(1)PIPS(1)PVLGR 86.551 0.010603 1606410000.0 1450930.0 1388030.0 1166540.0 1258820.0 1243020.0 1281180.0 1143200.0 1188240.0 1487210.0 1209650.0 True False 1370444.0205427532 1321346.9553244943 1241737.0349299929 1378457.8743219674 1340838.6021836586 1273183.6803904083 1258765.812556822 1184118.2727773017 1217170.1535131917 1198933.4420934597 1.1430526269663632 1.1021020091134401 1.0357013920320663 1.1497367793119857 1.1183594977903177 1.0619302420719037 1.04990466389768 0.9876430427278022 1.0152107788301317 1.0 20.193320140147232 -6.7956014891409575 1.6639078154158586 1.0010878783804804 1.106712980095946 0.6909748982001921 0.031081480752729783 0.22665466463703682 1.2771333770327316 0.01812926185402468 0.010749552451770387 1.6010264649402696e-07 6.7956014891409575 0.10562510171546569 DLS(ph)TSPKPSPIPS(ph)PVLGR ddPTM_KYSE-520_SHP099_60min_R1 2 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 2 DLS(0.706)T(0.163)S(0.131)PKPS(0.006)PIPS(0.994)PVLGR;DLS(0.735)T(0.132)S(0.132)PKPS(0.068)PIPS(0.932)PVLGR 80.738 0.0047521 1803300000.0 3629800.0 3113800.0 2888600.0 2811900.0 3204100.0 3122800.0 3235400.0 3324400.0 4059700.0 3343000.0 True False 3428447.7581730946 2964208.374090916 3074803.777923415 3079142.130571435 3456244.4411647925 3103309.446856153 3562465.8064611126 3312868.432320791 3322560.8167088083 3313383.620814643 1.034727079785033 0.8946167161175629 0.9279951040403316 0.9293044461342462 1.0431162934025204 0.9365982940705068 1.075174569006057 0.99984451287481 1.0027697353957188 1.0 21.659873816451753 -5.749930907950865 24.99755586995963 1.0092063808262954 0.9416101204854078 0.2974240643760414 0.047120487314497174 258.20700013426284 560848.8594987983 0.013433861822286041 0.017189258720144332 1.7785623395886336e-06 5.749930907950865 -0.06759626034088762 DLSHIGDAVVISCAK ddPTM_KYSE-520_SHP099_60min_R1 3 DLSHIGDAVVISCAK 15 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 ;; 150.34 9.0116e-06 2219200000.0 6321630.0 5523230.0 2851310.0 5078430.0 4156180.0 6156440.0 4584260.0 5784260.0 4127300.0 4348670.0 False True 5970956.582043024 5257885.740262756 3035110.0048573036 5561082.460314346 4483247.720570609 6118015.374344531 5047681.738866113 5764195.75211643 3377886.3607661296 4310144.167014061 1.3853264184848657 1.2198862814153297 0.7041783029174027 1.290231195251851 1.0401618940919253 1.419445646659868 1.171116682707854 1.3373556727476457 0.7837061197668078 1.0 22.03930469514847 -7.766728086004697 24.99915899134272 0.8918530202709847 1.1849375453255708 0.26564884362247054 0.2015840627280804 196.08446129938153 926820.2571398119 0.17552300940651328 0.05060741163619755 1.7110862996604096e-08 7.766728086004697 0.29308452505458615 DLSLDDFK ddPTM_KYSE-520_SHP099_60min_R1 4 DLSLDDFK 8 0 P30048-2;P30048 P30048-2 PRDX3 Thioredoxin-dependent peroxide reductase, mitochondrial 0 ;;; 155.75 0.0022659000000000004 952159000.0 1297990.0 1750130.0 1634990.0 832356.0 1650240.0 1811750.0 1402300.0 1403120.0 1752870.0 1649940.0 False True 1225987.9072210842 1666051.1278013135 1740384.071476492 911462.8639830443 1780104.499418807 1800442.1962154624 1544058.1691291372 1398252.9042106688 1434592.9942568082 1635322.8152338974 0.749691679098682 1.018790364985534 1.064244964519478 0.557359596216897 1.0885340085982973 1.1009705114142545 0.9441916634106846 0.8550317351321727 0.8772537023839057 1.0 20.64114402337581 DLSLEEIQK ddPTM_KYSE-520_SHP099_60min_R1 4 DLSLEEIQK 9 0 P16949;P16949-2;A2A2D0;E5RGX5;Q93045;Q93045-2 P16949 STMN1;STMN2 Stathmin;Stathmin-2 0 ;;; 201.07 1.4193e-05 2177930000.0 1022940.0 1372760.0 1564140.0 657690.0 1454240.0 1495730.0 1083040.0 1166000.0 1363900.0 1499260.0 False True 966195.479019665 1306810.5490452324 1664966.967112484 720196.6598582919 1568680.4145062536 1486394.5942571275 1192524.252651803 1161955.4181464447 1116250.1411210548 1485977.7228066283 0.6502085893957893 0.8794280889870977 1.1204521720337712 0.4846618147801208 1.0556554048087754 1.0002805368102772 0.8025182574066 0.7819467279440845 0.7511890144710557 1.0 20.50298105704637 -1.9399164062790795 21.991502461532203 0.8528879124826708 0.2766310566572011 0.0 0.1874454610310205 0.0 0.0 0.04151173923456837 0.0 0.011483746412773442 1.9399164062790795 -0.5762568558254697 DLSLEEIQKK ddPTM_KYSE-520_SHP099_60min_R1 1 DLSLEEIQKK 10 1 P16949;P16949-2;A2A2D0;E5RGX5;Q93045;Q93045-2 P16949 STMN1;STMN2 Stathmin;Stathmin-2 0 78.342 0.031898 65531000.0 97146.0 104190.0 83533.0 83132.0 89296.0 95337.0 88567.0 73990.0 92991.0 79163.0 False True 91757.11772425017 99184.5560076215 88917.67083752551 91032.84028545272 96323.08717526027 94741.96641953535 97520.21669062288 73733.34595939583 76106.17851234546 78461.677407882 1.1694513902277668 1.2641146516918302 1.133262425365802 1.1602204196096866 1.2276450154707497 1.2074935121131871 1.2429025214904 0.9397370588458617 0.969978988808874 1.0 16.259700558224267 -7.26384512515382 24.99960014093244 0.9661435024788458 1.2003079193482997 0.8776111852975692 0.03949311701713332 67.58728654621649 702330.6390767547 0.02056181572489426 0.010617107516023254 5.446968639282869e-08 7.26384512515382 0.23416441686945388 DLSLS(ph)IICK ddPTM_KYSE-520_SHP099_60min_R1 1 DLSLSIICK 9 0 Q4G0T1 Q4G0T1 Scavenger receptor cysteine-rich domain-containing protein SCART1 1 DLS(0.059)LS(0.941)IICK 68.626 0.043673000000000003 0.0 403450.0 331460.0 318740.0 298660.0 315430.0 363830.0 323970.0 368880.0 382890.0 411020.0 True False 381069.8242423642 315536.1640683967 339286.4904020312 327044.55660459684 340252.5464488033 361559.2020141137 356720.04924250627 367600.4413772391 313366.8278714278 407378.6825687212 0.9354191580166473 0.7745524681821527 0.8328528342785747 0.8028023325678739 0.83522422995564 0.8875260721408069 0.8756473141726819 0.902355614337351 0.7692273584260649 1.0 18.6360109629462 -6.2261329832649706 6.818436357673667 0.8801499474895642 0.8305229563962993 0.12566516113893156 0.06493344717477907 0.47332138366230136 71.14598700896026 0.02051415730714493 0.02023972334407607 5.941102110747096e-07 6.2261329832649706 -0.04962699109326496 DLSSS(ph)PPGPYGQEMYAFR ddPTM_KYSE-520_SHP099_60min_R1 11 DLSSSPPGPYGQEMYAFR 18 0 O43741;O43741-2 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 DLSS(0.006)S(0.994)PPGPYGQEMYAFR;DLSSS(1)PPGPYGQEMYAFR;DLSS(0.012)S(0.988)PPGPYGQEMYAFR;DLS(0.01)S(0.1)S(0.89)PPGPYGQEMYAFR;DLS(0.023)S(0.133)S(0.836)PPGPY(0.008)GQEMYAFR;DLSS(0.207)S(0.793)PPGPYGQEMYAFR;DLS(0.003)S(0.025)S(0.972)PPGPYGQEMYAFR;DLSS(0.136)S(0.863)PPGPYGQEMYAFR;DLSS(0.009)S(0.991)PPGPYGQEMYAFR;DLS(0.02)S(0.127)S(0.853)PPGPYGQEMYAFR;DLSS(0.004)S(0.996)PPGPYGQEMYAFR 275.69 2.45e-30 13404170000.0 9271540.0 9157470.0 7889890.0 7842470.0 7932930.0 8466850.0 7767400.0 8280330.0 10578550.0 7985070.0 True False 8757229.193843232 8717531.395557297 8398484.933670344 8587815.99087542 8557206.458802616 8414005.24853147 8552604.594518762 8251607.467873555 8657751.98354433 7914328.492090462 1.106503123113371 1.1014871829327721 1.0611746709861418 1.0850972384401327 1.081229628938784 1.063135711000672 1.0806481690854999 1.0426162467378208 1.0939338684509798 1.0 22.916035516372798 -13.999999999999972 0.13981004875246963 0.7349306394678474 1.106077405132012 0.671083392480466 0.01731399462534435 80.34169378468378 0.6877210017115257 5.95246154001777 0.10347737432923332 1.0000000000000655e-14 13.999999999999972 0.3711467656641645 DLST(ph)SPKPSPIPSPVLGR ddPTM_KYSE-520_SHP099_60min_R1 1 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 DLS(0.085)T(0.493)S(0.421)PKPSPIPSPVLGR 77.391 0.024412 1638900000.0 1481500.0 1468000.0 1243700.0 1126100.0 1392500.0 1698500.0 1494800.0 1840600.0 1850900.0 1965000.0 True False 1399318.2417029704 1397475.0764870755 1323870.8919903568 1233124.20542569 1502081.8277588014 1687899.0314734164 1645908.9718421414 1834215.388199269 1514823.2173920062 1947591.6287468656 0.71848647378061 0.717540092009047 0.6797476803913827 0.6331533711813684 0.7712509160481874 0.8666596254367027 0.8450996335926771 0.9417864408153439 0.7777930419462141 1.0 20.89325977398032 -6.116285117986391 2.7298984730968474 0.8822220919291096 0.6890227853072262 0.7127430883274856 0.05953973249599584 0.15232620540015857 2.204549608562012 0.020268936325582448 0.02056578352536287 7.650941512397458e-07 6.116285117986391 -0.19319930662188345 DLSTS(ph)PKPS(ph)PIPS(ph)PVLGR ddPTM_KYSE-520_SHP099_60min_R1 10 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 3 DLS(0.022)T(0.133)S(0.845)PKPS(1)PIPS(1)PVLGR;DLS(0.13)T(0.13)S(0.74)PKPS(1)PIPS(1)PVLGR;DLS(0.058)T(0.435)S(0.508)PKPS(1)PIPS(1)PVLGR;DLS(0.279)T(0.339)S(0.411)PKPS(0.971)PIPS(1)PVLGR;DLS(0.023)T(0.242)S(0.758)PKPS(0.977)PIPS(1)PVLGR;DLS(0.157)T(0.203)S(0.643)PKPS(0.997)PIPS(1)PVLGR;DLS(0.023)T(0.135)S(0.841)PKPS(1)PIPS(1)PVLGR;DLS(0.072)T(0.378)S(0.889)PKPS(0.662)PIPS(0.999)PVLGR;DLS(0.045)T(0.436)S(0.53)PKPS(0.988)PIPS(1)PVLGR;DLS(0.054)T(0.129)S(0.817)PKPS(1)PIPS(1)PVLGR 152.01 3.179e-06 29506110000.0 13954980.0 12006990.0 11574320.0 11625860.0 12085490.0 10720190.0 10991330.0 11103930.0 13099640.0 10214010.0 True False 13180869.440837067 11430156.177540576 12320419.186766787 12730778.23895775 13036549.305968199 10653281.317757428 12102440.901443465 11065413.058506759 10721075.591051402 10123521.817779532 1.302004349680764 1.1290691503688228 1.217009199815121 1.2575444067892656 1.2877484279307458 1.0523295656900251 1.1954773367691507 1.0930398785799051 1.0590262740603187 1.0 23.271207933014296 -7.2946093058371355 0.6540872923818923 1.0016736781510818 1.2306318673525527 0.5900915027573534 0.06508229119192145 0.5276521155736748 0.45654075765880714 0.06192327374381916 0.0318652781423522 5.074470056526435e-08 7.2946093058371355 0.22895818920147093 DLSTS(ph)PKPS(ph)PIPSPVLGR ddPTM_KYSE-520_SHP099_60min_R1 1 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 2 DLS(0.077)T(0.094)S(0.831)PKPS(0.915)PIPS(0.084)PVLGR 94.20299999999999 0.0012637 0.0 208580.0 185680.0 200540.0 150220.0 164890.0 175430.0 150450.0 171540.0 211470.0 162510.0 True False 197009.65160607826 176759.6540886378 213467.12927534487 164496.86363471023 177865.90490423623 174335.0762975457 165658.9542505021 170944.9677777368 173072.37872488395 161070.28783086667 1.2231284506857656 1.0974069548708194 1.3253042019736003 1.021273792019554 1.104275079529292 1.0823540371431373 1.0284885963850379 1.0613066511511988 1.0745146175352973 1.0 17.297330863251833 -5.2847024512285685 24.99921815465853 1.0580442725508947 1.2034926001753143 0.6088218282296327 0.05923067030022755 525.4550461315392 564668.9049983134 0.015820333100561232 0.02348092409688469 5.191556068995489e-06 5.2847024512285685 0.14544832762441962 DLSTS(ph)PKPSPIPS(ph)PVLGR ddPTM_KYSE-520_SHP099_60min_R1 6 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 2 DLS(0.003)T(0.401)S(0.596)PKPSPIPS(1)PVLGR;DLS(0.055)T(0.434)S(0.51)PKPS(0.003)PIPS(0.997)PVLGR;DLS(0.324)T(0.324)S(0.353)PKPS(0.005)PIPS(0.995)PVLGR;DLS(0.312)T(0.312)S(0.375)PKPSPIPS(1)PVLGR;DLS(0.106)T(0.106)S(0.787)PKPSPIPS(1)PVLGR;DLS(0.245)T(0.334)S(0.421)PKPS(0.001)PIPS(0.999)PVLGR 188.09 6.3657e-12 32634280000.0 24159950.0 20569610.0 18634980.0 18527800.0 21018680.0 20554420.0 20987130.0 22430390.0 26246110.0 21753080.0 True False 22819749.411833707 19581415.059985947 19836220.627822217 20288676.541413818 22672730.536069937 20426132.240505043 23108713.91505041 22352584.212382365 21480478.034591034 21560364.634840157 1.0584120351544735 0.9082135386682489 0.9200317788581444 0.9410173197455403 1.0515930931628248 0.9473927081686612 1.0718146147541596 1.0367442569251373 0.9962947472548757 1.0 24.361878241765183 -5.74886904698194 24.998933649609217 1.0183734929987633 0.9508049374159581 0.25896883227002765 0.04959477107514618 289.7432821616133 576217.2208931762 0.01447138848047565 0.018548864463225744 1.7829162899863237e-06 5.74886904698194 -0.06756855558280528 DLSTS(ph)PKPSPIPSPVLGR ddPTM_KYSE-520_SHP099_60min_R1 1 DLSTSPKPSPIPSPVLGR 18 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 DLS(0.004)T(0.035)S(0.961)PKPSPIPSPVLGR 175.85 6.32e-09 1692100000.0 1313400.0 1559900.0 1095600.0 1146600.0 1300700.0 1938200.0 1340800.0 1820700.0 1945100.0 1878000.0 True False 1240543.0838020116 1484960.0625423635 1166224.1290219787 1255572.5192621397 1403057.6900293527 1926102.9748612132 1476341.14894698 1814384.4166545738 1591918.8719807628 1861362.3810618906 0.6664704822788418 0.7977812798038859 0.6265433001588107 0.6745449097052487 0.7537799755192864 1.0347812948504893 0.7931508469107131 0.9747615161425384 0.8552439268019306 1.0 20.827927524488125 -6.081459128674281 5.673707827000282 0.9206459121713796 0.6962892893182051 0.6892857635261298 0.07712234034714016 0.13173962550164753 7.049825587504207 0.024254228642095282 0.024470393020956178 8.289739270942677e-07 6.081459128674281 -0.22435662285317448 DLSYKDR ddPTM_KYSE-520_SHP099_60min_R1 2 DLSYKDR 7 1 Q14192 Q14192 FHL2 Four and a half LIM domains protein 2 0 ; 95.531 0.006829899999999999 1016750000.0 1993810.0 2230200.0 1554090.0 1184200.0 1815580.0 1778990.0 1174940.0 1351200.0 1876110.0 1532620.0 False True 1883209.3847383044 2123057.8444015514 1654269.1280319188 1296746.0119572885 1958455.8167628893 1767886.663527165 1293714.401509369 1346513.0025724496 1535455.7168843907 1519042.1791603188 1.2397347556071725 1.397629291357212 1.0890211942280295 0.8536603063083417 1.2892702017303201 1.1638167048820198 0.851664568145498 0.886422392376729 1.010805188920524 1.0 20.534730498953888 -4.111529539007148 0.4019753732439434 0.9481051595638946 1.6528248559327379 0.3657938498411982 0.14451413082927939 7.15525572901351 0.8327712235210627 0.12600293716730576 2.5000350701328786 7.735180653209838e-05 4.111529539007148 0.7047196963688432 DLT(ph)DYLMK ddPTM_KYSE-520_SHP099_60min_R1 1 DLTDYLMK 8 0 P60709;A0A2R8Y793;P63267-2;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 1 DLT(1)DYLMK 103.7 0.0098682 12153000.0 31859.0 34019.0 31995.0 30812.0 32489.0 33207.0 31854.0 36236.0 39228.0 34421.0 True False 30091.717760658037 32384.67617643996 34057.44889381001 33740.36321603439 35045.69946287663 32999.74279548877 35074.11318508136 36110.30577354597 32105.184057406488 34116.05671913276 0.882039738894624 0.9492502736483664 0.9982821043532303 0.9889877805576612 1.0272494195738195 0.9672789287216202 1.0280822743916742 1.0584548522366248 0.9410578813876065 1.0 15.05816328293144 -4.297641019663077 1.4246213068524611 1.005351237478837 0.8355040665564034 0.5884966497821409 0.031142872371672924 0.7544493861251265 1.4668586816957747 0.008721214379035341 0.1798320943770087 5.0391696577010895e-05 4.297641019663077 -0.1698471709224335 DLTDYLMK ddPTM_KYSE-520_SHP099_60min_R1 7 DLTDYLMK 8 0 P60709;A0A2R8Y793;P63267-2;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 0 ;;;;;; 188.81 4.7671000000000005e-05 36498280000.0 17760350.0 22665250.0 16098310.0 12222360.0 21866900.0 24245860.0 19455170.0 20019260.0 19213280.0 21310900.0 False True 16775147.981120016 21576377.368766166 17136032.82080672 13383969.419613477 23587700.6243583 24094532.59419491 21421888.44776165 19949817.85959042 15724632.679374093 21122102.00562933 0.7941987959649663 1.021507109615121 0.811284445849174 0.6336476083699655 1.116730741006357 1.14072607867216 1.014193021227358 0.9444996456448093 0.7444634381172509 1.0 24.332250078557394 -5.778821545892329 24.98571048928278 0.99906284543311 0.8296217232510533 0.2962515678545131 0.13370080288361727 351.5983958306076 505397.29441088816 0.04460612412068405 0.050694573154924615 1.664096296670432e-06 5.778821545892329 -0.16944112218205665 DLVAQAPLKPKT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 DLVAQAPLKPKTPR 14 2 O94776-2;O94776 O94776-2 MTA2 Metastasis-associated protein MTA2 1 DLVAQAPLKPKT(1)PR 79.863 0.022594 1146100000.0 557490.0 703600.0 672600.0 633960.0 656600.0 463790.0 602680.0 660330.0 804260.0 682580.0 True False 526564.9183712368 669797.9998748681 715956.8721980508 694211.3677929753 708270.6844570406 460895.3145758348 663604.7759899802 658039.4693521814 658226.6577447159 676532.872239205 0.7783286518338707 0.9900450182974173 1.0582735910944863 1.0261310222742872 1.046912446564184 0.6812607834566149 0.9808906606320028 0.9726644430065701 0.9729411308072898 1.0 19.367800509842322 DLVDEDLSHFQS(ph)GSPPAPNGFK ddPTM_KYSE-520_SHP099_60min_R1 1 DLVDEDLSHFQSGSPPAPNGFK 22 0 Q70EK8 Q70EK8 USP53 Inactive ubiquitin carboxyl-terminal hydrolase 53 1 DLVDEDLSHFQS(0.5)GS(0.5)PPAPNGFK 79.293 0.005567 621010000.0 140900.0 163990.0 167490.0 176580.0 184310.0 172360.0 147420.0 159210.0 184160.0 171710.0 True False 133083.99612281373 156111.6742459916 178286.67339347504 193362.11010928729 198814.14841955106 171284.2373063041 162322.65228055156 158657.73766989316 150721.1862958086 170188.78298835832 0.7819786579701746 0.9172853316465066 1.0475818104044534 1.136162482121481 1.1681977209576193 1.006436701048745 0.9537799696919812 0.9322455621575605 0.8856117521336211 1.0 17.37677642767483 -10.082514522634963 13.426549057708291 0.9999999911982627 0.9896922503508647 0.0 0.10989066018340715 0.0 0.0 0.11819970455123238 0.028667639436033596 8.26961854829633e-11 10.082514522634963 -0.01030774084739794 DLVDEDLSHFQSGS(ph)PPAPNGFK ddPTM_KYSE-520_SHP099_60min_R1 2 DLVDEDLSHFQSGSPPAPNGFK 22 0 Q70EK8 Q70EK8 USP53 Inactive ubiquitin carboxyl-terminal hydrolase 53 1 DLVDEDLSHFQS(0.001)GS(0.999)PPAPNGFK;DLVDEDLSHFQS(0.001)GS(0.999)PPAPNGFK 295.75 6.3306e-45 1212580000.0 692640.0 729760.0 724380.0 886070.0 862370.0 795510.0 737850.0 728060.0 879280.0 754310.0 True False 654217.8784563922 694701.2342079083 771074.6938489801 970281.8263933405 930233.6127858935 790544.9270105483 812439.0787220533 725534.5297904807 719624.9168450183 747627.4002442994 0.8750587234264232 0.9292078299710569 1.0313622716302517 1.2978146949620695 1.2442476191775802 1.0574049677048016 1.0866898116047854 0.9704493569302042 0.9625448674164017 1.0 19.51195991868331 -10.249929057660438 13.209003617802368 1.0000000092527448 1.0582799111897492 0.010825709356963586 0.12672898602987437 0.0 0.0 0.1377609461273531 0.03341193717459418 5.6243319158382993e-11 10.249929057660438 0.058279901937004386 DLVLPTQALPAS(ph)PALK ddPTM_KYSE-520_SHP099_60min_R1 10 DLVLPTQALPASPALK 16 0 J3KSZ6;U3KQ35;H3BR06;Q15554 J3KSZ6 TERF2 Telomeric repeat-binding factor 2 1 DLVLPTQALPAS(1)PALK;DLVLPTQALPAS(1)PALK;DLVLPTQALPAS(1)PALK;DLVLPTQALPAS(1)PALK;DLVLPT(0.005)QALPAS(0.995)PALK;DLVLPTQALPAS(1)PALK;DLVLPTQALPAS(1)PALK;DLVLPT(0.016)QALPAS(0.984)PALK;DLVLPTQALPAS(1)PALK;DLVLPTQALPAS(1)PALK 291.18 2.0538000000000002e-37 8735765000.0 10312241.0 14255990.0 9298024.0 7264058.0 7853158.0 12460440.0 8460796.0 11322870.0 12736000.0 12597370.0 True False 9740200.434787216 13571110.841722745 9897389.504404403 7954431.88830133 8471156.856243208 12382669.77199448 9316095.82909159 11283593.606747715 10423463.44843297 12485767.102405561 0.7801042863366102 1.0869264763963182 0.7926937466659562 0.6370799505597694 0.6784650704089393 0.9917428116698399 0.7461372419237831 0.9037164888790669 0.8348276371761525 1.0 23.573781124711864 -8.589833003522743 0.7751587580027569 1.0015455095543266 0.8205079109100513 0.14235210293577683 0.12942907001600606 4.532595362249921 4.09847737560035 0.15420428987043958 0.04773490706483826 2.5713843506580606e-09 8.589833003522743 -0.18103759864427538 DLVMGS(ph)SPQLK ddPTM_KYSE-520_SHP099_60min_R1 3 DLVMGSSPQLK 11 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.735)S(0.265)PQLK;DLVMGS(0.716)S(0.284)PQLK;DLVMGS(0.5)S(0.5)PQLK 198.14 4.4831e-07 2558860000.0 6021850.0 5328170.0 4494750.0 4663120.0 4459260.0 5150240.0 4621280.0 4999430.0 5184930.0 5027880.0 True False 5687805.976239641 5072196.715453779 4784488.7768542785 5106301.522781846 4810178.392281299 5118095.441775471 5088444.081746486 4982088.144205731 4243477.413448773 4983336.894831447 1.141364932027543 1.0178313893878006 0.9600973961476682 1.0246751585424485 0.9652524992380624 1.0270418295587824 1.021091728119777 0.9997494147692462 0.8515333205447074 1.0 22.24868067898142 -4.287773558761094 3.069734817328916 0.9852014992021203 1.1611919911811484 0.4885042248898077 0.04898997341929793 0.28801800951543755 4.229278349023074 0.012403020739308704 0.11916057504923883 5.154973549577184e-05 4.287773558761094 0.17599049197902805 DLVMGSS(ph)PQLK ddPTM_KYSE-520_SHP099_60min_R1 5 DLVMGSSPQLK 11 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 DLVMGS(0.18)S(0.82)PQLK;DLVMGS(0.33)S(0.67)PQLK;DLVMGS(0.172)S(0.828)PQLK;DLVMGS(0.275)S(0.725)PQLK;DLVMGS(0.038)S(0.962)PQLK 183.89 1.1121e-06 3332680000.0 14270000.0 13179100.0 10616640.0 10977080.0 10923170.0 12540040.0 11180860.0 12570500.0 12671600.0 12060940.0 True False 13478414.65346026 12545956.253767606 11301005.601624614 12020338.382820543 11782761.33466436 12461772.958868343 12311130.443478024 12526895.869476754 10370756.865041098 11954089.454869332 1.1275149566469085 1.0495116588455162 0.9453673275818851 1.0055419468125384 0.9856678234798398 1.042469441601193 1.0298676858623688 1.047917193255911 0.8675488755705031 1.0 23.51100090810689 -4.4338450729694365 3.518846861116117 0.9957648596138781 1.1250723245352452 0.4115686533641775 0.050557802307436076 0.2531983772553455 5.406631011170742 0.012704669418600413 0.06493273511784893 3.6826032070110046e-05 4.4338450729694365 0.12930746492136713 DLVQPDKPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 15 DLVQPDKPASPK 12 1 H0YJA2;Q6PJT7-9;Q6PJT7-2;G3V4R5;Q6PJT7-5;Q6PJT7;G3V411 H0YJA2;Q6PJT7-5 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK;DLVQPDKPAS(1)PK 238.07 4.5178e-15 137105410000.0 44615090.0 37258660.0 36038710.0 31980240.0 34405260.0 37706520.0 36084440.0 38357400.0 44946410.0 36006750.0 True False 42140202.01972304 35468698.047211125 38361822.91057475 35019632.39439025 37112758.2228487 37471179.62215655 39732207.34539699 38224347.13208446 36785274.95079167 35687758.207827576 1.1808027216032926 0.9938617561982809 1.0749294670507115 0.9812785715049261 1.0399296589806128 1.0499729179945467 1.1133287530703546 1.071077283966257 1.0307533114456984 1.0 25.08892594290221 -4.248043008494004 24.640134224786134 1.0436222450597163 1.1808028317867434 0.5417293282275271 0.03883070526814962 1551.6775534308947 2853965.8966386206 0.009845375991529213 0.18588187897521233 5.6488103146863425e-05 4.248043008494004 0.13718058672702704 DLVSFPLS(ph)PAVR ddPTM_KYSE-520_SHP099_60min_R1 2 DLVSFPLSPAVR 12 0 J3QLB5;E9PI66;Q7KZJ0;J3QKK3;O43502-2;O43502 J3QLB5 RAD51C DNA repair protein RAD51 homolog 3 1 DLVSFPLS(1)PAVR;DLVSFPLS(1)PAVR 232.37 3.7707e-15 373910000.0 521870.0 531230.0 437980.0 369680.0 368410.0 475650.0 402180.0 418990.0 527380.0 514190.0 True False 492920.8307779468 505708.9134075136 466212.8915927778 404814.2760516551 397401.7710338389 472681.2919165915 442836.2792985507 417536.62148300157 431621.08616791596 509634.67663376714 0.9672042609694096 0.992296907164591 0.9147982132460091 0.7943224717861224 0.7797777295272612 0.9274904428378782 0.8689288614023826 0.8192861291168596 0.8469225230489699 1.0 18.959103919428067 -4.98104202147097 4.608748119266426 0.854115468119669 0.9769096434437569 0.3626763401165034 0.061391561093409715 0.18321285708798668 9.89779866805755 0.016179245569297476 0.03364865146176527 1.0446191390588582e-05 4.98104202147097 0.12279417532408787 DLVVPGSKPSGNDS(ph)CELR ddPTM_KYSE-520_SHP099_60min_R1 1 DLVVPGSKPSGNDSCELR 18 1 P33981-2;P33981 P33981-2 TTK Dual specificity protein kinase TTK 1 DLVVPGSKPS(0.01)GNDS(0.99)CELR 108.64 0.00010766 137320000.0 306250.0 301750.0 296690.0 265280.0 287040.0 255890.0 236340.0 277880.0 354860.0 283420.0 True False 289261.7020057605 287253.4770640161 315815.1121207841 290492.1314406599 309628.41496580705 254292.89559242423 260231.55365612227 276916.0991376795 290426.369292629 280909.11929742317 1.0297341101963078 1.0225850900905626 1.124260803318396 1.0341142792630038 1.1022369645393257 0.9052496986514061 0.9263905504633769 0.9857853665636397 1.0338801745525716 1.0 18.09974393461353 -6.25354366985651 24.997980438941532 0.9666308297816013 1.0622085510466734 0.5118885070417705 0.0450071696144598 512.3237083421733 1622028.3292056283 0.015553093170269714 0.015281427993348758 5.577715134096049e-07 6.25354366985651 0.09557772126507214 DLYANTVLSGGSTMYPGIADR ddPTM_KYSE-520_SHP099_60min_R1 1 DLYANTVLSGGSTMYPGIADR 21 0 Q562R1 Q562R1 ACTBL2 Beta-actin-like protein 2 0 101.62 8.392700000000001e-05 0.0 120400.0 139060.0 152870.0 133230.0 133960.0 139410.0 93667.0 137550.0 165400.0 137870.0 False True 113721.1719885503 132379.3488666845 162724.24480064816 145892.13914294 144501.88987186295 138539.8904784863 103135.7744618264 137072.8711544115 135367.52939469332 136648.57906123684 0.8322162789383123 0.9687575954036145 1.190822809271408 1.067644758146814 1.0574708560058044 1.0138406958216661 0.754751898412407 1.003104987231404 0.9906252251187373 1.0 17.060110932527238 -6.549055717388096 24.999649569312727 0.9297959934556281 1.032463782631603 0.12579765521203612 0.10758327883171474 430.10673540922534 410758.72584674176 0.042932850285137165 0.033256470293153644 2.824517582934089e-07 6.549055717388096 0.10266778917597486 DLYDAGVK ddPTM_KYSE-520_SHP099_60min_R1 6 DLYDAGVK 8 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2 Annexin A2;Annexin 0 ;;;;; 121.62 0.010669 3361100000.0 8984750.0 11940700.0 7424040.0 6160930.0 12311280.0 13502470.0 10275010.0 10861740.0 10306690.0 13180870.0 False True 8486348.006844912 11367050.848643897 7902605.497283988 6746462.93484885 13280107.694398826 13418196.076243062 11313708.285233967 10824063.159089169 8435254.906511443 13064097.746361697 0.6495931193723905 0.8700984231237537 0.6049101630064605 0.5164124661213374 1.0165346242986653 1.0271046907912167 0.8660152813373425 0.8285350714023577 0.645682164224516 1.0 23.639104154594857 -5.766474837587023 24.99992171768663 0.8936635191392664 0.6712893648290837 0.4285332385338464 0.13382867791765488 140.16679033462174 695896.015845664 0.0439811860449864 0.05140745095244171 1.7120843695956438e-06 5.766474837587023 -0.2223741543101827 DLYDAGVKR ddPTM_KYSE-520_SHP099_60min_R1 5 DLYDAGVKR 9 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2 Annexin A2;Annexin 0 ;;;; 137.05 0.0011330000000000001 18560830000.0 14995780.0 15348830.0 9893460.0 8239730.0 15414900.0 14092500.0 10105420.0 11292140.0 13611080.0 12605440.0 False True 14163934.190053694 14611449.16773647 10531208.26169569 9022831.461834839 16627964.931216625 14004543.480152534 11126974.472995056 11252970.201945296 11139650.979404615 12493765.608483933 1.1336801596818518 1.1694992227014822 0.8429170669365238 0.722186708521877 1.3309009831211618 1.1209225400100913 0.8906021468370791 0.9006868349045967 0.8916167733961807 1.0 23.574705033544085 -6.77586617632576 24.852445413231326 0.9124503061842324 1.0466283678821156 0.13610682245633487 0.162628786512539 518.4409983352084 893088.0829000501 0.07343952991345616 0.04976689722720008 1.6754590731163736e-07 6.77586617632576 0.13417806169788316 DLYDDHFK ddPTM_KYSE-520_SHP099_60min_R1 1 DLYDDHFK 8 0 A0A087X2H1;Q9ULT8;H0YJP0;G3V4V5 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 0 107.69 0.0015710999999999998 0.0 247690.0 224650.0 148490.0 137940.0 234500.0 248560.0 187700.0 177350.0 197390.0 188620.0 False True 233950.1419422262 213857.4767934752 158061.9029924004 151049.77612682665 252953.8158775148 247008.64484134963 206674.5477754684 176734.81424380117 161548.95179696806 186948.9735441393 1.2514117489229744 1.1439350146684957 0.8454815236259183 0.807973284170845 1.353063411272443 1.3212623752814028 1.1055131454181097 0.9453639187918487 0.8641339330960583 1.0 17.51228502444089 -7.274489431072356 5.319643521969247 0.9259684276653997 1.11420255481421 0.1902615973462526 0.1717742918531242 0.3437599801580306 32.92521700736182 0.10349103318454474 0.051699380150053396 5.3150893407374044e-08 7.274489431072356 0.18823412714881038 DLYDDKDGLRK ddPTM_KYSE-520_SHP099_60min_R1 4 DLYDDKDGLRK 11 2 Q12874 Q12874 SF3A3 Splicing factor 3A subunit 3 0 ;;; 138.45 6.7895e-05 6826920000.0 12319950.0 12069310.0 8446910.0 6940920.0 11834530.0 11383970.0 8407950.0 9760280.0 9925860.0 9313560.0 False True 11636537.814288558 11489482.231196346 8991411.334133865 7600582.949936311 12765840.181735277 11312918.420560732 9257907.63968434 9726423.86674647 8123574.034568386 9231049.104240034 1.2605867093636873 1.2446561708700001 0.9740400286684536 0.8233715219264934 1.3829240899467896 1.2255290046463352 1.00290958645556 1.0536639721999637 0.880027171650191 1.0 23.13806318810257 -6.862276129785926 7.192150628628577 0.9860529385251389 1.1432903920763657 0.22220616095290957 0.15340158763555534 0.4274481513060896 26.703132668939737 0.06990179343855588 0.047045557314267426 1.3731686198589167e-07 6.862276129785926 0.15723745355122687 DMDDEESWIK ddPTM_KYSE-520_SHP099_60min_R1 1 DMDDEESWIK 10 0 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 162.88 0.00051927 231120000.0 156700.0 170090.0 170910.0 116770.0 152240.0 161800.0 135530.0 143970.0 202990.0 163400.0 False True 148007.5386262945 161918.6210897051 181927.1320656686 127867.78569181918 164220.42187289044 160790.14618333743 149230.69504533403 143470.6016728507 166132.13296148015 161952.40312327637 0.9138952912827901 0.9997914076424939 1.1233370333331063 0.7895392919516461 1.0140042302915857 0.9928234659225511 0.9214478585522518 0.8858812768813469 1.025808384177061 1.0 17.305210350092672 -5.232775554072247 24.999778111040058 0.94594452868915 1.0110862051417018 0.11767724196480112 0.08183775668952914 1622.8582892460022 1415409.821062083 0.021786308699734185 0.03772685402639956 5.850923851882293e-06 5.232775554072247 0.06514167645255176 DMDEPS(ph)PVPNVEEVTLPK ddPTM_KYSE-520_SHP099_60min_R1 13 DMDEPSPVPNVEEVTLPK 18 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK;DMDEPS(1)PVPNVEEVTLPK 242.1 1.1945e-23 7340434000.0 3574910.0 4067796.0 2846877.0 2432455.0 2744013.0 3995316.0 2934727.0 3806635.0 4247380.0 3905888.0 True False 3376602.6158935926 3872372.9742737273 3030391.2465842566 2663634.791855734 2959951.2118017343 3970379.750856778 3231397.845335413 3793430.671660284 3476162.8597365962 3871284.871054879 0.8722175526632089 1.0002810703048448 0.782786942196406 0.6880492861094785 0.7645914238791688 1.0255974135468096 0.8347093931258268 0.979889312724904 0.8979351754058293 1.0 21.884381042528307 -6.2526896868142625 24.989678376590664 0.9393120381341058 0.8219386743630837 0.32301923342085637 0.09083522857906176 937.705368820892 2678148.367706014 0.03274478927470541 0.03227351242449805 5.588693768606076e-07 6.2526896868142625 -0.11737336377102214 DMES(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 3 DMESPTK 7 0 E7EVA0;P27816-6;P27816;P27816-2;P27816-5;H7C456 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMES(0.823)PT(0.177)K;DMES(1)PTK;DMES(1)PTK 117.53 0.0026542 717300000.0 2809330.0 2455490.0 2237660.0 2720320.0 2698470.0 2509950.0 2686210.0 2932440.0 2799290.0 2752060.0 True False 2653490.864639487 2337524.5746343667 2381903.1439825874 2978858.394905966 2910824.236805959 2494284.471031319 2957758.321683226 2922268.050076638 2291009.5003583515 2727678.889470283 0.9728017747553843 0.8569647195855651 0.8732344386934616 1.092085438064325 1.0671432946314452 0.9144347894688258 1.0843498965736487 1.0713387346866714 0.8399117319866295 1.0 21.379242385300564 -5.243928312070175 24.75623073170622 1.0143774344731278 0.8965967404949715 0.27379713953454554 0.08094488126651586 908.2985946022877 1284102.927563454 0.02175638621371781 0.037563731258980854 5.702583956732976e-06 5.243928312070175 -0.11778069397815627 DMES(ph)PTKLDVTLAK ddPTM_KYSE-520_SHP099_60min_R1 34 DMESPTKLDVTLAK 14 1 E7EVA0;P27816-6;P27816;P27816-2;P27816-5;H7C456 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMES(0.891)PT(0.109)KLDVTLAK;DMES(0.895)PT(0.105)KLDVTLAK;DMES(0.865)PT(0.134)KLDVTLAK;DMES(0.975)PT(0.025)KLDVTLAK;DMES(0.986)PT(0.014)KLDVTLAK;DMES(0.919)PT(0.081)KLDVTLAK;DMES(0.905)PT(0.095)KLDVTLAK;DMES(0.992)PT(0.008)KLDVTLAK;DMES(0.565)PT(0.435)KLDVTLAK;DMES(0.996)PT(0.004)KLDVTLAK;DMES(0.99)PT(0.01)KLDVTLAK;DMES(0.981)PT(0.019)KLDVTLAK;DMES(0.987)PT(0.013)KLDVTLAK;DMES(0.98)PT(0.02)KLDVTLAK;DMES(0.987)PT(0.013)KLDVTLAK;DMES(0.864)PT(0.136)KLDVTLAK;DMES(0.864)PT(0.136)KLDVTLAK;DMES(0.97)PT(0.03)KLDVTLAK;DMES(0.731)PT(0.269)KLDVTLAK;DMES(0.986)PT(0.014)KLDVTLAK;DMES(0.877)PT(0.122)KLDVTLAK;DMES(0.901)PT(0.099)KLDVTLAK;DMES(0.887)PT(0.113)KLDVTLAK;DMES(0.871)PT(0.129)KLDVTLAK;DMES(0.985)PT(0.015)KLDVTLAK;DMES(0.925)PT(0.075)KLDVTLAK;DMES(0.711)PT(0.289)KLDVTLAK;DMES(0.962)PT(0.038)KLDVTLAK;DMES(0.924)PT(0.076)KLDVTLAK;DMES(0.992)PT(0.008)KLDVTLAK;DMES(0.792)PT(0.207)KLDVT(0.001)LAK;DMES(0.813)PT(0.187)KLDVTLAK;DMES(0.964)PT(0.036)KLDVTLAK;DMES(0.982)PT(0.018)KLDVTLAK 262.24 1.7488e-24 264768180000.0 205746070.0 198705240.0 191458428.0 168711671.0 174801590.0 170615170.0 165649723.0 198291490.0 230829430.0 191682180.0 True False 194332925.352478 189159142.00775412 203800144.61319616 184745977.48682627 188557480.6480033 169550297.4375463 182395213.58634296 197603663.10277155 188916624.24839988 189984025.01167953 1.0228908738012636 0.9956581454473622 1.0727225333849373 0.9724290106784965 0.992491240441987 0.8924450222966008 0.9600555287484301 1.0401067305033862 0.9943816288595105 1.0 27.501302872363716 -5.302764557253034 24.70435251916235 0.9767010712036391 1.0269473108018374 0.2611860688219867 0.039509865744572055 626.4800808735189 374510.79430221143 0.011929352466112557 0.017694323402265028 4.980069948274974e-06 5.302764557253034 0.050246239598198295 DMESPT(ph)KLDVTLAK ddPTM_KYSE-520_SHP099_60min_R1 1 DMESPTKLDVTLAK 14 1 E7EVA0;P27816-6;P27816;P27816-2;P27816-5;H7C456 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMES(0.298)PT(0.698)KLDVT(0.004)LAK 214.82 2.6548e-13 28974000000.0 21659000.0 21377000.0 20321000.0 18909000.0 18598000.0 19396000.0 16690000.0 20229000.0 25121000.0 21656000.0 True False 20457532.09385396 20350016.83246882 21630924.1747496 20706105.67480187 20061556.791855063 19274942.36941911 18377188.078703064 20158830.320484105 20559659.648875985 21464144.68811308 0.9531025992935753 0.9480935359021658 1.007770143607394 0.9646834744954449 0.934654377491465 0.8980065429811253 0.8561807770928985 0.9391862854730074 0.957860653085422 1.0 24.355425349049316 -5.819265452006638 3.798727562379474 0.9214616799588801 0.9702106486616208 0.1668903556000535 0.038532818345188374 0.3328134248042504 9.722919311314802 0.012568334606244024 0.014902377283431606 1.5161233904092113e-06 5.819265452006638 0.0487489687027407 DMFCAGR ddPTM_KYSE-520_SHP099_60min_R1 1 DMFCAGR 7 0 Q99832-3;Q99832;Q99832-2;Q99832-4 Q99832-3 CCT7 T-complex protein 1 subunit eta 0 128.75 0.015989 433770000.0 245730.0 283750.0 172280.0 194350.0 281870.0 298400.0 202570.0 254390.0 228150.0 271730.0 False True 232098.86704938958 270118.22408256686 183385.44445774608 212820.96556654168 304051.56537908374 296537.5749141405 223047.75249268295 253507.58046507207 186723.71119346624 269322.6836027413 0.8617872952422458 1.0029538562039544 0.6809134752579731 0.7902080980317971 1.1289489667627424 1.101049384134097 0.8281803430329872 0.941278235735253 0.6933085200832512 1.0 18.038976219846386 -3.9596410358566647 16.160521604731954 0.9069366132060497 0.6591076615648869 0.008342526140910134 0.14919122708570856 20574609.46483961 225132198.9589983 0.03871381308270176 150935516.8248908 0.00010973848598938036 3.9596410358566647 -0.2478289516411628 DMHSAYK ddPTM_KYSE-520_SHP099_60min_R1 4 DMHSAYK 7 0 P08621;P08621-2 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 0 ;;; 151.29 0.0022193 5562490000.0 7314500.0 7026400.0 4780310.0 4408250.0 6945000.0 7121000.0 5152480.0 6157900.0 5860200.0 5973080.0 False True 6908750.10390575 6688841.197158586 5088456.431366425 4827208.75461131 7491531.988355383 7076555.197599168 5673342.961758902 6136539.682164662 4796135.403620206 5920163.158185917 1.1669864358979527 1.1298406848652143 0.8595128707441997 0.8153844118192318 1.2654266087239008 1.1953311097202257 0.9583085482896309 1.0365490811988107 0.8101356796203332 1.0 22.497205506033477 -7.643585792674891 7.984757702696156 0.9060549549498548 1.0511640486579128 0.14686638628030935 0.14328558788923024 0.4884160546522729 31.478991015497254 0.10486852891507463 0.03913747182274956 2.2720307627683194e-08 7.643585792674891 0.14510909370805802 DMLPS(ph)PEQTLS(ph)PLSK ddPTM_KYSE-520_SHP099_60min_R1 6 DMLPSPEQTLSPLSK 15 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 2 DMLPS(0.999)PEQT(0.001)LS(0.999)PLS(0.001)K;DMLPS(0.962)PEQT(0.038)LS(1)PLSK;DMLPS(1)PEQT(0.036)LS(0.962)PLS(0.001)K;DMLPS(1)PEQTLS(0.999)PLSK;DMLPS(0.993)PEQT(0.069)LS(0.936)PLS(0.002)K;DMLPS(1)PEQT(0.007)LS(0.993)PLSK 254.82 1.2114e-19 726380000.0 1552195.0 1502065.0 1319445.0 1541066.0 1692905.0 1830020.0 2012057.0 2273560.0 2786320.0 2297920.0 True False 1466091.6491259788 1429903.542754468 1404498.535886644 1687528.4493016126 1826126.9921881594 1818598.1663685485 2215455.3573439852 2265673.5510128913 2280394.5254112557 2277562.216554706 0.6437109109334244 0.6278219459214156 0.6166674726503167 0.7409362681886934 0.8017901679764262 0.7984845169760335 0.9727309933580341 0.9947800918651527 1.0012435703560425 1.0 21.119059034235775 -6.24636859409784 0.7500778777699441 1.0214416964766573 0.6155901544115747 0.9545878921157328 0.03270416923308075 0.13046751824438854 0.16074472979362367 0.023761262084937267 0.02371925961733524 5.670631237127853e-07 6.24636859409784 -0.40585154206508256 DMLPS(ph)PEQTLSPLSK ddPTM_KYSE-520_SHP099_60min_R1 7 DMLPSPEQTLSPLSK 15 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 DMLPS(0.992)PEQT(0.003)LS(0.005)PLSK;DMLPS(0.951)PEQT(0.048)LSPLSK;DMLPS(1)PEQTLSPLSK;DMLPS(0.992)PEQT(0.008)LSPLSK;DMLPS(1)PEQTLSPLSK;DMLPS(1)PEQTLSPLSK;DMLPS(1)PEQTLSPLSK 324.35 2.9599e-43 2764661000.0 1971264.0 2141817.0 1475599.0 1417753.0 1496412.0 1957460.0 1333192.0 1737239.0 1881771.0 1869407.0 True False 1861914.0563026406 2038920.8963871407 1570718.4725818771 1552495.818857018 1614171.1109804 1945242.766057082 1467964.0580600551 1731212.9233836296 1540088.8219865856 1852845.5083566364 1.004894389686082 1.1004268230628371 0.8477331032175537 0.8378981473927577 0.871184944292562 1.04986776138848 0.7922754765247815 0.9343536282844825 0.8312019620850919 1.0 20.821311162713307 -4.762172593605231 24.999997258631822 0.8921116023523636 1.052660628946669 0.38889822988985356 0.07867545173099823 17.2836064075402 589407.0657876054 0.019644664794807316 0.04518518124278768 1.729129046947773e-05 4.762172593605231 0.16054902659430526 DMLPSPEQTLS(ph)PLSK ddPTM_KYSE-520_SHP099_60min_R1 8 DMLPSPEQTLSPLSK 15 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 DMLPS(0.001)PEQT(0.03)LS(0.968)PLS(0.001)K;DMLPSPEQT(0.001)LS(0.999)PLS(0.001)K;DMLPSPEQT(0.021)LS(0.97)PLS(0.009)K;DMLPSPEQT(0.001)LS(0.999)PLSK;DMLPSPEQTLS(0.997)PLS(0.003)K;DMLPSPEQTLS(0.996)PLS(0.004)K;DMLPSPEQTLS(1)PLSK;DMLPSPEQTLS(1)PLSK 294.98 2.9088e-33 5553236000.0 1891114.0 2243660.0 1612338.0 1531008.0 1589402.0 2593770.0 2102510.0 3119110.0 3560600.0 3206490.0 True False 1786210.1365777028 2135871.2057976783 1716271.8873120134 1676514.5400056613 1714478.8949396734 2577581.3193198685 2315052.229320191 3108290.5354157453 2914084.7954216753 3178082.9932114733 0.5620401167600491 0.6720627530369705 0.5400336904284899 0.5275238386117578 0.5394695162467049 0.8110490899154291 0.7284429746690837 0.9780394476969897 0.9169316225052304 1.0 21.599725369382295 -6.830882277011955 1.1111651235219324 0.977920709951696 0.5693348791554622 0.8547944779139603 0.06825433074181426 0.184074886927515 0.44477605994290975 0.04971526327815647 0.026541510394371977 1.4761066031304765e-07 6.830882277011955 -0.4085858307962338 DMPEDDGEPSKGAS(ph)PELAK ddPTM_KYSE-520_SHP099_60min_R1 2 DMPEDDGEPSKGASPELAK 19 1 Q8TED9;Q8TED9-2;Q8TED9-3 Q8TED9 AFAP1L1 Actin filament-associated protein 1-like 1 1 DMPEDDGEPS(0.001)KGAS(0.999)PELAK;DMPEDDGEPS(0.003)KGAS(0.997)PELAK 164.66 4.3403e-07 0.0 746630.0 736560.0 578510.0 557560.0 575720.0 680760.0 602790.0 632340.0 749880.0 615740.0 True False 705212.9455299956 701174.5520009008 615801.6802487272 610550.3347634736 621025.8886012908 676511.1243248994 663725.8958634761 630146.5601292661 613720.6949364734 610285.0226384716 1.1555468664151678 1.1489296410544088 1.0090394773025975 1.0004347347799147 1.0175997534994103 1.1085166753726148 1.0875670731586387 1.0325446910116298 1.0056296192279932 1.0 19.219123659260134 -4.75173062938938 24.696617166196052 1.0368092504910387 1.152238350001315 0.6443832258166602 0.03542422261820059 118.87047301595477 302369.49890559237 0.01006084146948409 0.02590581599307485 1.7712072067490155e-05 4.75173062938938 0.11542909951027625 DMPGGFLFEGLS(ph)DDEDDFHPNTR ddPTM_KYSE-520_SHP099_60min_R1 28 DMPGGFLFEGLSDDEDDFHPNTR 23 0 H3BUV9;Q96S82 H3BUV9 UBL7 Ubiquitin-like protein 7 1 DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR;DMPGGFLFEGLS(1)DDEDDFHPNTR 320.35 4.734399999999999e-61 53167190000.0 17185973.0 17167824.0 16050730.0 14528195.0 15748387.0 15823682.0 13618809.0 15018739.0 18476960.0 15649032.0 True False 16232632.818302212 16343055.96561081 17085385.73787602 15908950.284738908 16987695.46083518 15724920.531141182 14995531.120487377 14966642.499809027 15122009.830257384 15510393.751242671 1.0465648441066608 1.0536841441759934 1.1015442942257454 1.025696093850893 1.0952459191743054 1.0138311627247583 0.9668053152606751 0.9649427822301365 0.9749597639354468 1.0 23.886731975714785 -6.51063126095437 4.0809333492865045 0.9746080700915923 1.0636892370821645 0.7700702488999167 0.022656302907178346 0.0951578934140091 3.6716791453042807 0.008306323715732018 0.006764625528835707 3.0858068519554473e-07 6.51063126095437 0.08908116699057211 DMQGLS(ph)LDAASQPSK ddPTM_KYSE-520_SHP099_60min_R1 1 DMQGLSLDAASQPSK 15 0 E9PLZ8;Q96EY5;E9PLL0;M0QZK6;E9PQA6;Q96EY5-3 E9PLZ8 MVB12A Multivesicular body subunit 12A 1 DMQGLS(1)LDAASQPSK 231.86 2.2103000000000003e-17 0.0 344370.0 403550.0 284090.0 271420.0 341110.0 303760.0 285480.0 316160.0 407000.0 409340.0 True False 325267.10961542436 384162.85225910065 302402.89596007124 297215.6751946016 367953.4163495906 301864.121165949 314339.1044163064 315063.31475229905 333099.05963506777 405713.56606170075 0.8017161288759023 0.9468819492239442 0.7453605727201194 0.7325751467462667 0.9069290433675871 0.7440326043227296 0.7747808570160108 0.7765658856583177 0.8210202652785098 1.0 18.630102017953938 -8.05164838062721 19.885326075226157 1.0000000009980876 0.8042085154911612 0.43385127084685227 0.06690223448950512 956.8472632583706 368400.4159247573 0.06504377186348251 0.016794214922357126 8.878745741350022e-09 8.05164838062721 -0.19579148550692638 DMRDS(ph)RDPMYR ddPTM_KYSE-520_SHP099_60min_R1 2 DMRDSRDPMYR 11 2 Q9HCD5;Q5JY17 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 DMRDS(1)RDPMYR;DMRDS(1)RDPMYR 74.76899999999999 0.013462 477220000.0 281210.0 334400.0 297100.0 255320.0 300840.0 330890.0 270880.0 310790.0 370340.0 272300.0 True False 265610.7207217631 318334.9220553671 316251.54137680767 279585.5360352427 324514.39645454776 328824.79277258646 298263.19393403793 309711.94202893163 303095.59151167347 269887.6338461945 0.9841529859538924 1.1795091072486192 1.1717896699077195 1.035933110572139 1.2024055783136933 1.2183766558195828 1.1051384225481569 1.1475588474180796 1.1230436429866355 1.0 18.041999348990785 -4.2517039591784735 24.275595107313585 1.1385146056821907 0.9841528597588362 0.3009155819179403 0.06662744443735513 1052.4412824527928 2624217.670678737 0.015918100467746627 0.19886672798980184 5.601392954820053e-05 4.2517039591784735 -0.1543617459233545 DMS(ph)LKR ddPTM_KYSE-520_SHP099_60min_R1 3 DMSLKR 6 1 I3L379;I3L2C0;B7Z683;A0A0G2JQ41;A0A1C7CYZ0;Q12979-3;Q12979-4;Q12979-2;Q12979 I3L379 ABR Active breakpoint cluster region-related protein 1 DMS(1)LKR;DMS(1)LKR;DMS(1)LKR 127.56 0.0049081 2098720000.0 3372280.0 2282950.0 2397400.0 2015140.0 2034500.0 2518880.0 1990370.0 1779810.0 2313390.0 1911400.0 True False 3185212.9059264828 2173273.65522219 2551940.239975624 2206658.299726065 2194603.57527848 2503158.7355889063 2191576.0237392606 1773636.2545207785 1893336.6918161383 1894466.4830466998 1.6813244965959977 1.1471692292634863 1.347049558708248 1.1647914172528906 1.1584282936212715 1.3213000905475518 1.1568301911653494 0.9362193896766118 0.9994036362001272 1.0 20.853360185196102 -1.0000000000000002 0.2621007238723991 0.9968316434825573 4.598672863993009 0.63301082422145 0.12484209859751891 36.36605815932769 0.5031598663380453 0.1556300954039762 58.6761821669301 0.09999999999999995 1.0000000000000002 3.601841220510452 DMS(ph)PLS(ph)ETEMALGK ddPTM_KYSE-520_SHP099_60min_R1 4 DMSPLSETEMALGK 14 0 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 2 DMS(1)PLS(0.899)ET(0.101)EMALGK;DMS(1)PLS(0.846)ET(0.154)EMALGK;DMS(1)PLS(0.802)ET(0.198)EMALGK;DMS(1)PLS(0.985)ET(0.015)EMALGK 141.55 0.00011754 179108000.0 840340.0 806050.0 786130.0 754950.0 794780.0 772870.0 720710.0 837170.0 937800.0 785250.0 True False 793724.6650237408 767326.1480942843 836805.1976524726 826700.2210160055 857324.6643203876 768046.2316484308 793566.4002517739 834266.0526669463 767519.160014169 778293.2959152549 1.0198271900702152 0.9859087211999258 1.0751797581249998 1.0621962508925702 1.1015444547960467 0.9868339296758637 1.0196238415731929 1.0719173055266638 0.9861567150100969 1.0 19.569954404486314 -8.939521156946956 11.315630060252552 1.0000002035435613 1.0361990812470476 0.06145452142741814 0.03969157303786954 0.0 0.0 0.03903508536536722 0.009467398827435955 1.1494202472776686e-09 8.939521156946956 0.03619887770348629 DMS(ph)PLSETEMALGK ddPTM_KYSE-520_SHP099_60min_R1 14 DMSPLSETEMALGK 14 0 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMS(0.994)PLS(0.006)ETEMALGK;DMS(0.711)PLS(0.288)ET(0.001)EMALGK;DMS(0.998)PLS(0.002)ETEMALGK;DMS(1)PLSETEMALGK;DMS(0.998)PLS(0.002)ETEMALGK;DMS(0.999)PLS(0.001)ETEMALGK;DMS(1)PLSETEMALGK;DMS(1)PLSETEMALGK;DMS(1)PLSETEMALGK;DMS(1)PLSETEMALGK;DMS(1)PLSETEMALGK;DMS(1)PLSETEMALGK;DMS(0.999)PLS(0.001)ETEMALGK;DMS(1)PLSETEMALGK 377.84 3.5591e-68 29354900000.0 10082530.0 10084700.0 8030610.0 8186240.0 8276930.0 9546230.0 8267630.0 10116360.0 11093000.0 10644280.0 True False 9523231.961874744 9600215.8745567 8548275.970030313 8964257.788317202 8928277.301710358 9486648.437575785 9103402.724693112 10081268.70833618 9078790.831773482 10549979.960324528 0.9026777299756881 0.9099747971712154 0.8102646642152825 0.8496942953474058 0.8462838162050609 0.8992100907539512 0.8628834138954216 0.9555723087862691 0.8605505286186543 1.0 23.330736922748937 -8.745489768872957 0.47127615275964624 1.0101083079045174 0.8643376209792009 0.4905343978110447 0.03813114246531722 2.463158554670392 0.8454374023290081 0.09475427185356024 0.02177607849023882 1.7968434097849137e-09 8.745489768872957 -0.14577068692531658 DMS(ph)PLSETEMALGKDVT(ph)PPPETEVVLIK ddPTM_KYSE-520_SHP099_60min_R1 6 DMSPLSETEMALGKDVTPPPETEVVLIK 28 1 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 2 DMS(0.999)PLS(0.005)ET(0.001)EMALGKDVT(0.562)PPPET(0.433)EVVLIK;DMS(0.999)PLS(0.001)ET(0.001)EMALGKDVT(0.994)PPPET(0.004)EVVLIK;DMS(0.965)PLS(0.019)ET(0.018)EMALGKDVT(0.991)PPPET(0.007)EVVLIK;DMS(0.624)PLS(0.173)ET(0.203)EMALGKDVT(0.852)PPPET(0.147)EVVLIK;DMS(1)PLSETEMALGKDVT(0.98)PPPET(0.02)EVVLIK;DMS(0.819)PLS(0.08)ET(0.101)EMALGKDVT(0.99)PPPET(0.01)EVVLIK 163.43 4.2077999999999997e-10 1127363000.0 1497630.0 1747340.0 1579920.0 1436550.0 1553770.0 1398360.0 1167250.0 1361640.0 2266520.0 1415420.0 True False 1414553.4784486112 1663395.1635891905 1681764.1711613797 1573079.2800854933 1676042.8592580203 1389632.3165446955 1285247.0212622024 1356916.7886491667 1854977.1023195917 1402880.4799800972 1.008320736253084 1.1856998420940246 1.1987936215245072 1.1213209553730557 1.194715361127413 0.9905564560741557 0.916148623922999 0.9672362029503878 1.3222631070794488 1.0 20.419960671450184 -6.264283888383269 24.980299693689094 1.0294998735137622 1.1462425542767416 0.16390026989650575 0.11451377160909626 430.53971359742695 3780955.584286348 0.03987540020896827 0.03670615204471436 5.441468402009992e-07 6.264283888383269 0.11674268076297944 DMS(ph)PPFICEETDEQK ddPTM_KYSE-520_SHP099_60min_R1 3 DMSPPFICEETDEQK 15 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 DMS(1)PPFICEETDEQK;DMS(1)PPFICEETDEQK;DMS(1)PPFICEETDEQK 250.52 3.6200000000000003e-19 931090000.0 535030.0 489340.0 426230.0 530740.0 496430.0 512130.0 528140.0 562990.0 609320.0 562040.0 True False 505350.8193441371 465831.3718856857 453705.46779211296 581181.3700271999 535496.2166996785 508933.6067050217 581529.5453496854 561037.1190928541 498682.84770722233 557060.7628605037 0.9071736030180327 0.8362308080964891 0.8144631574163257 1.0432997776451476 0.9612887002665715 0.9136051946858554 1.0439247998073578 1.0071381014378606 0.8952036850459344 1.0 19.087475176322314 -5.254107752761285 24.98527024598605 0.9799723993661505 0.8509833470011778 0.5706215936599295 0.05087974233688985 411.2809494898694 1401590.4554585693 0.013953358023195011 0.023543101990915145 5.570475227787905e-06 5.254107752761285 -0.1289890523649727 DMSLKDS(ph)GSDLSHRPK ddPTM_KYSE-520_SHP099_60min_R1 1 DMSLKDSGSDLSHRPK 16 2 O95251;O95251-4 O95251 KAT7 Histone acetyltransferase KAT7 1 DMS(0.001)LKDS(0.492)GS(0.492)DLS(0.014)HRPK 79.51100000000001 0.0057442 756610000.0 506750.0 519440.0 467500.0 716630.0 500170.0 483040.0 490930.0 469580.0 634210.0 444690.0 True False 478639.56731892 494485.32270466397 497635.79802644724 784738.2997373347 539530.5334219891 480025.16818540957 540557.9954150809 467951.13658079604 519053.4511330617 440750.39256358513 1.0859651526002185 1.1219169195256626 1.1290649002760798 1.7804596728161144 1.224118100687008 1.0891088840406613 1.226449265923449 1.0617146223262564 1.1776585112358808 1.0 18.74960232894945 -6.007478731019996 24.993337599281915 1.1258991277060706 1.2879861626013207 0.14520821360183733 0.19242939875608633 788.7104393944962 2635817.756841377 0.06471749139258744 0.0703882500277337 9.82927009331181e-07 6.007478731019996 0.16208703489525011 DMSPLS(ph)ETEMALGK ddPTM_KYSE-520_SHP099_60min_R1 2 DMSPLSETEMALGK 14 0 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMSPLS(0.975)ET(0.025)EMALGK;DMS(0.004)PLS(0.981)ET(0.015)EMALGK 173.71 6.0608000000000005e-06 43809000.0 333126.0 295538.0 254397.0 211096.0 197341.0 247061.0 211450.0 330973.0 341947.0 324359.0 True False 314646.83670978283 281339.9108684183 270795.8376695916 231158.5003716733 212870.61398330345 245519.00065637528 232825.4295531316 329824.93191267917 279858.0445823895 321485.43160748365 0.9787281343869716 0.8751249145619734 0.8423269331850118 0.7190325832677399 0.6621469996911306 0.7637017933557273 0.7242176679327693 1.0259405232252565 0.8705154792957495 1.0 18.294393836488172 -7.261788235622782 24.999998646557213 0.9611710039342575 0.7906988569270459 0.4145914032605018 0.09267128470870453 34.62855425111173 2481322.6480996595 0.05133134202643571 0.027056035476972738 5.472827559246754e-08 7.261788235622782 -0.17047214700721158 DMSPLSETEMALGKDVT(ph)PPPETEVVLIK ddPTM_KYSE-520_SHP099_60min_R1 10 DMSPLSETEMALGKDVTPPPETEVVLIK 28 1 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DMSPLSETEMALGKDVT(0.78)PPPET(0.22)EVVLIK;DMSPLSETEMALGKDVT(1)PPPETEVVLIK;DMSPLSETEMALGKDVT(1)PPPETEVVLIK;DMSPLSETEMALGKDVT(0.974)PPPET(0.026)EVVLIK;DMSPLSETEMALGKDVT(0.999)PPPET(0.001)EVVLIK;DMSPLSET(0.001)EMALGKDVT(0.996)PPPET(0.003)EVVLIK;DMSPLS(0.001)ET(0.001)EMALGKDVT(0.959)PPPET(0.04)EVVLIK;DMSPLSET(0.001)EMALGKDVT(0.995)PPPET(0.003)EVVLIK;DMS(0.002)PLS(0.003)ET(0.006)EMALGKDVT(0.986)PPPET(0.003)EVVLIK;DMSPLSETEMALGKDVT(0.998)PPPET(0.001)EVVLIK 194.11 5.2204999999999995e-15 5153334000.0 2483064.0 3526042.0 2498900.0 2004400.0 2098434.0 2717391.0 1787005.0 2441069.0 3843254.0 2591747.0 True False 2345323.490054635 3356645.649623052 2659983.0923813647 2194897.5733551676 2263568.8173437794 2700430.75480399 1967652.9048881263 2432601.5013887887 3145415.9541491694 2568786.1379286554 0.913008465525974 1.3067049841407539 1.0355019645684658 0.8544493217816205 0.881182276687701 1.0512477916832292 0.7659854885680543 0.9469848289318162 1.224475602583826 1.0 21.292655354232842 -4.999108665560541 24.998221921767076 0.9503202847426674 1.1251684232377102 0.14070996198533792 0.14620010010592907 48.39921441368244 1357215.1665335568 0.03733854473967303 0.07668967536037723 1.0020544809530306e-05 4.999108665560541 0.17484813849504277 DNAMLEYLK ddPTM_KYSE-520_SHP099_60min_R1 1 DNAMLEYLK 9 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 110.14 0.0071465 62513000.0 86631.0 123070.0 95509.0 49343.0 110380.0 114820.0 95524.0 96536.0 91805.0 97444.0 False True 81825.40573538301 117157.5324681639 101665.66295980317 54032.543884486106 119066.2780237104 114103.36578968368 105180.49814439974 96201.13914767187 75135.52621571846 96580.72197028474 0.8472229660962616 1.2130529786701127 1.0526496477328358 0.5594547522756192 1.2328161934878046 1.1814300355384606 1.0890423678626147 0.996069786859435 0.7779557315675857 1.0 16.559447627684747 -7.546026818605421 21.443201861746314 0.8883217609355323 1.0304115329892742 0.06986597859823929 0.19521149324920045 133.39196615749938 123554.19773450498 0.13389736729963375 0.05062725140550072 2.84428546136458e-08 7.546026818605421 0.14208977205374196 DNFFRCGVLY(ph)EDS(ph)LSSQVRTQMELEEDVK ddPTM_KYSE-520_SHP099_60min_R1 6 DNFFRCGVLYEDSLSSQVRTQMELEEDVK 29 2 F5H4I5;E7EUS6;C9JG41;B8ZZM6;Q9NQX7-2;Q9NQX7-3;Q9NQX7 F5H4I5 ITM2C Integral membrane protein 2C;CT-BRI3 2 DNFFRCGVLY(0.45)EDS(0.381)LS(0.41)S(0.408)QVRT(0.351)QMELEEDVK;DNFFRCGVLY(0.465)EDS(0.375)LS(0.412)S(0.41)QVRT(0.337)QMELEEDVK;DNFFRCGVLY(0.451)EDS(0.381)LS(0.41)S(0.409)QVRT(0.35)QMELEEDVK;DNFFRCGVLY(0.439)EDS(0.385)LS(0.408)S(0.407)QVRT(0.361)QMELEEDVK;DNFFRCGVLY(0.444)EDS(0.383)LS(0.409)S(0.408)QVRT(0.357)QMELEEDVK;DNFFRCGVLY(0.452)EDS(0.392)LS(0.418)S(0.416)QVRT(0.322)QMELEEDVK 72.842 0.014502000000000001 30665645100.0 4583735.7 4179283.0 3622460.1 2147400.5 4312758.2 3829362.6 3762345.9 3937066.3 4411173.0 4664647.6 True False 4329466.743270424 3978503.971448328 3855969.6741870902 2351488.7978804964 4652147.734102525 3805462.127583468 4142680.5405295053 3923409.535923484 3610215.1798221115 4623322.451304922 0.9364405768514896 0.8605292002346504 0.8340256849484404 0.5086144915582935 1.0062347550059951 0.8231011718659997 0.8960397169269999 0.8486125675305451 0.7808702978965131 1.0 22.14049855544889 DNFFRCGVLY(ph)EDSLSSQVRT(ph)QMELEEDVK ddPTM_KYSE-520_SHP099_60min_R1 3 DNFFRCGVLYEDSLSSQVRTQMELEEDVK 29 2 F5H4I5;E7EUS6;C9JG41;B8ZZM6;Q9NQX7-2;Q9NQX7-3;Q9NQX7 F5H4I5 ITM2C Integral membrane protein 2C;CT-BRI3 2 DNFFRCGVLY(0.388)EDS(0.264)LS(0.302)S(0.315)QVRT(0.73)QMELEEDVK;DNFFRCGVLY(0.381)EDS(0.275)LS(0.308)S(0.319)QVRT(0.717)QMELEEDVK;DNFFRCGVLY(0.355)EDS(0.294)LS(0.335)S(0.347)QVRT(0.67)QMELEEDVK 84.516 0.013049000000000002 18585049000.0 2424433.0 2393663.0 2216417.0 1622739.2 2569256.0 2495620.0 1889810.0 2351687.0 2360567.0 2873950.0 True False 2289944.8685026364 2278667.8365185848 2359290.786212589 1776963.84567367 2771441.8301330497 2480043.909876763 2080850.4375682373 2343529.546684872 1931947.5378515301 2848489.038899263 0.8039156328955144 0.7999566806825863 0.8282604405331628 0.6238268153421925 0.9729515516071684 0.8706524322224959 0.7305102491713772 0.8227272475622649 0.6782359038313482 1.0 21.441765423994703 -10.092155192840359 4.436048873334197 1.0000151069592644 0.7953528317201809 0.309317188088288 0.09299474777492696 124044512.76537657 74660448.71720256 26496.43389807993 0.022894108324019807 8.088068246829294e-11 10.092155192840359 -0.20466227523908354 DNFFRCGVLYEDS(ph)LS(ph)SQVRTQMELEEDVK ddPTM_KYSE-520_SHP099_60min_R1 1 DNFFRCGVLYEDSLSSQVRTQMELEEDVK 29 2 F5H4I5;E7EUS6;C9JG41;B8ZZM6;Q9NQX7-2;Q9NQX7-3;Q9NQX7 F5H4I5 ITM2C Integral membrane protein 2C;CT-BRI3 2 DNFFRCGVLY(0.381)EDS(0.405)LS(0.405)S(0.405)QVRT(0.405)QMELEEDVK 45.611000000000004 0.06718400000000001 24980000.0 12619.0 11065.0 12997.0 8442.6 13965.0 15128.0 10573.0 14761.0 14543.0 13659.0 True False 11918.998914647165 10533.420791096398 13834.807415935265 9244.982165639754 15063.966050019155 15033.580540553328 11641.822022536104 14709.797536243306 11902.357799196037 13537.991886541195 0.8804111432875393 0.7780637541649147 1.021924634900184 0.6828916905195268 1.1127179109181626 1.1104734488354195 0.8599371398729992 1.0865568290720475 0.8791819273454268 1.0 13.724726136912619 -5.7760255725545955 24.99980442192428 1.010178440146607 0.8492758130348714 0.3400910319175142 0.11391891485722541 277.8930060603047 476289.0942320502 0.03396005881853152 0.03867060812803539 1.674844253297169e-06 5.7760255725545955 -0.16090262711173553 DNFFRCGVLYEDS(ph)LSSQVRTQMELEEDVK ddPTM_KYSE-520_SHP099_60min_R1 3 DNFFRCGVLYEDSLSSQVRTQMELEEDVK 29 2 F5H4I5;E7EUS6;C9JG41;B8ZZM6;Q9NQX7-2;Q9NQX7-3;Q9NQX7 F5H4I5 ITM2C Integral membrane protein 2C;CT-BRI3 1 DNFFRCGVLY(0.187)EDS(0.203)LS(0.203)S(0.203)QVRT(0.203)QMELEEDVK;DNFFRCGVLY(0.187)EDS(0.203)LS(0.203)S(0.203)QVRT(0.203)QMELEEDVK;DNFFRCGVLY(0.182)EDS(0.204)LS(0.204)S(0.204)QVRT(0.204)QMELEEDVK 76.691 0.0096762 80368000.0 104037.0 116115.0 102728.0 70242.0 100668.0 104655.0 110413.0 131226.0 136887.0 117264.0 True False 98265.86021738229 110536.66110783166 109350.01125061144 76917.77856097269 108589.99887743143 104001.80932519892 121574.62356703663 130770.80763437868 112031.77144045578 116225.13219001151 0.8454785842422757 0.9510564455811501 0.940846520801024 0.6617998802119931 0.9343073811256438 0.8948306391699413 1.0460269760612486 1.1251508616964794 0.9639203615384994 1.0 16.826562541160676 -6.70738410472174 3.851497625219067 1.04561340021049 0.8683434548036015 0.45788282494359 0.08652102617973888 0.20405098040183517 6.171058095440967 0.036516357813269416 0.02661545464069531 1.9616245822996214e-07 6.70738410472174 -0.17726994540688845 DNFFRCGVLYEDSLSS(ph)QVRT(ph)QMELEEDVK ddPTM_KYSE-520_SHP099_60min_R1 1 DNFFRCGVLYEDSLSSQVRTQMELEEDVK 29 2 F5H4I5;E7EUS6;C9JG41;B8ZZM6;Q9NQX7-2;Q9NQX7-3;Q9NQX7 F5H4I5 ITM2C Integral membrane protein 2C;CT-BRI3 2 DNFFRCGVLY(0.255)EDS(0.341)LS(0.386)S(0.4)QVRT(0.617)QMELEEDVK 81.487 0.038709 66577000.0 40528.0 35857.0 30383.0 18885.0 38024.0 35073.0 29015.0 33367.0 32272.0 38703.0 True False 38279.831049434986 34134.37589754572 32341.53679451882 20679.8247220177 41016.272473034616 34854.09639733121 31948.119359111442 33251.25766491633 26412.218310916243 38360.12153047837 0.9979069283975133 0.8898401395945745 0.8431030847705321 0.5390969552999696 1.0692425059301716 0.9086023455279851 0.8328471882897351 0.8668183607942201 0.688533228184141 1.0 15.227319670581737 -10.077321154237179 4.585686384851299 1.0000076031805334 0.8487506703369511 0.09440266548266618 0.14081942899103744 1.2775551041742166e-05 2.5707255334043574e-06 0.13620336361773117 0.0330322280474868 8.369101707599451e-11 10.077321154237179 -0.15125693284358233 DNFFSLT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 DNFFSLTPK 9 0 Q562F6-2;Q562F6 Q562F6-2 SGOL2 Shugoshin-like 2 1 DNFFSLT(1)PK 117.03 0.0038734000000000004 101250000.0 246210.0 258280.0 229150.0 180630.0 172870.0 214220.0 212000.0 234590.0 256000.0 216260.0 True False 232552.24049253322 245871.84111381628 243921.3756529634 197797.02089161033 186473.88550424727 212882.97351912546 233431.02892061416 233776.2620437174 209516.85323483398 214344.1046477341 1.084948153226437 1.1470893567047098 1.1379896641143379 0.9228013115484645 0.869974407790266 0.9931832455527063 1.0890480487170322 1.0906586977417423 0.9774789634600238 1.0 17.709569212037504 -5.244282911152813 24.848641935534584 0.994679100835591 1.1257171055422943 0.4664609826630849 0.06436703656192207 791.2535369924893 1146013.8298582141 0.020170243529314315 0.034827901888989515 5.697929728279512e-06 5.244282911152813 0.13103800470670335 DNHLHFY(ph)QDR ddPTM_KYSE-520_SHP099_60min_R1 2 DNHLHFYQDR 10 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 DNHLHFY(1)QDR;DNHLHFY(1)QDR 87.713 0.0081233 845480000.0 825150.0 888990.0 875790.0 859970.0 981510.0 861220.0 806010.0 887250.0 1021520.0 797160.0 True False 779377.2846042564 846281.5859988052 932244.8247135439 941701.2902405913 1058749.2529720222 855844.8065266612 887489.3566995485 884172.3368357059 836037.7184236223 790097.7825810952 0.9864314288519871 1.0711099368411952 1.179910696202794 1.1918794242963662 1.3400230658960908 1.0832137811231202 1.1232652163638455 1.1190669766814019 1.0581446206473966 1.0 19.591671686859495 -9.460091685966384 7.372137790307765 0.9999969751487467 1.1343413099447681 0.14905445445821586 0.09074341438665044 0.0 0.0 0.0936369046137323 0.02271028518695906 3.466636569190851e-10 9.460091685966384 0.13434433479602137 DNHLHFYQDR ddPTM_KYSE-520_SHP099_60min_R1 6 DNHLHFYQDR 10 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 0 ;;;;; 207.88 6.9524e-09 5358950000.0 2386850.0 2460110.0 1879360.0 1914920.0 2512470.0 2526020.0 2051850.0 2299150.0 2071170.0 1874760.0 False True 2254446.6724324864 2341922.622899606 2000506.5526823206 2096913.4210583107 2710187.0950011895 2510254.1722004595 2259271.0221262397 2291174.7852756446 1695097.7379468395 1858151.0849412086 1.2132741469210597 1.2603510241330584 1.0766113524862355 1.1284945761687923 1.4585396833255564 1.3509419080848764 1.2158704641596583 1.2330400922959055 0.9122496828617529 1.0 20.825436380320156 -7.754720864621667 24.7057737961302 0.9561248025363356 1.2434059996881401 0.5553614487412535 0.10236325174465753 96.84820962717768 356148.2608806233 0.07962140922776335 0.028541329208848217 1.7590538525903398e-08 7.754720864621667 0.28728119715180456 DNIQGITKPAIR ddPTM_KYSE-520_SHP099_60min_R1 4 DNIQGITKPAIR 12 1 P62805 P62805 HIST1H4A Histone H4 0 ;;; 190.37 9.1509e-08 28168300000.0 7997330.0 6619190.0 14699400.0 5516900.0 8469720.0 6264180.0 9604500.0 5755530.0 18286500.0 6803150.0 False True 7553702.162617895 6301194.176793253 15646946.843871564 6041224.517283538 9136238.777885307 6225082.929040413 10575416.590886991 5735565.409780805 14966132.56515151 6742879.383770607 1.1202487442974067 0.9344960540091458 2.3205141236149203 0.8959413587946008 1.3549461970023162 0.9232084061926905 1.5683828805155395 0.8506107084735491 2.219546237349788 1.0 22.684933360377034 -10.722307515847591 2.5736421216796996 0.9353839538742914 1.335640691617185 0.040349084759465303 0.511058420132267 69686117.76595375 55922439.783326365 29041034.099104766 0.1223002535819706 1.8953633743870106e-11 10.722307515847591 0.4002567377428936 DNIQGITKPAIRR ddPTM_KYSE-520_SHP099_60min_R1 4 DNIQGITKPAIRR 13 2 P62805 P62805 HIST1H4A Histone H4 0 ;;; 172.1 3.7158e-07 24408900000.0 9156000.0 5911800.0 20606100.0 6678050.0 7539100.0 5206540.0 10143600.0 6577050.0 22551100.0 6286480.0 False True 8648098.427966509 5627788.254207288 21934402.176925723 7312729.864171062 8132384.2783887945 5174044.052592047 11169014.079995964 6554235.748645014 18456388.706968963 6230786.678007436 1.3879625278283663 0.903222746185722 3.5203262943259994 1.1736447164821928 1.3051938220086001 0.8303998066335134 1.7925527958482026 1.0519114338770807 2.962128164668798 1.0 22.57098289385924 -10.838661763603763 2.8224703093732666 0.7798963751089304 1.6282140728967975 0.050064639075789064 0.851431949599505 211872269.52559474 211943446.97607642 320418619.3012335 0.20547998790745223 1.4499006227596052e-11 10.838661763603763 0.8483176977878671 DNIYINIFDEMMT(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 1 DNIYINIFDEMMTEK 15 0 A0A5S8K7B6;Q6DHV5 A0A5S8K7B6 CC2D2B Protein CC2D2B 1 DNIYINIFDEMMT(1)EK 62.303000000000004 0.018673 395340000.0 1369800.0 1442200.0 1134500.0 1001800.0 1130300.0 1407600.0 1090600.0 1597000.0 1868700.0 1471800.0 True False 1293814.4633713989 1372914.5472136668 1207631.68526418 1097010.770797847 1219248.1794727275 1398814.6462772924 1200848.4912302934 1591460.3797426021 1529391.1860934894 1458760.9970430746 0.8869269647282699 0.9411511207089993 0.8278475279446484 0.7520154247484685 0.8358107887064143 0.9589059819344676 0.8231975585201601 1.0909671858299685 1.0484179308286847 1.0 20.476312101225748 -7.261327555387609 24.999999984656085 1.0522694270362614 0.8612806491954729 0.6676546691155119 0.05997322891882555 6.245311899194361 1396620.4433850572 0.0324616906223074 0.01719240977113237 5.478635970971685e-08 7.261327555387609 -0.1909887778407885 DNKAQDWEKHFLDAS(ph)TSK ddPTM_KYSE-520_SHP099_60min_R1 1 DNKAQDWEKHFLDASTSK 18 2 Q96L12 Q96L12 CALR3 Calreticulin-3 1 DNKAQDWEKHFLDAS(0.333)T(0.333)S(0.333)K 59.468999999999994 0.018531 30913000000.0 3437900.0 3659100.0 3527400.0 3176200.0 4120700.0 2422600.0 3333600.0 3976300.0 4185900.0 2582500.0 True False 3247192.833716258 3483311.3435789244 3754781.848039547 3478065.09304065 4444975.6464242 2407479.6547821583 3670592.820800757 3962507.143375394 3425846.0779519146 2559621.0591545966 1.2686224869507658 1.360869934680647 1.4669287997183824 1.3588203146716573 1.7365756663575456 0.940560965527183 1.4340375922727786 1.5480835060343459 1.3384192420589862 1.0 21.287498810586772 -6.247160395752975 24.999247220815768 1.2978390279555037 1.431226104627316 0.15004058744136095 0.20744166191394878 2159.847120683935 3781401.5687923273 0.06887982367491885 0.06858108506841357 5.660302013995737e-07 6.247160395752975 0.13338707667181238 DNLEFFLAGIGR ddPTM_KYSE-520_SHP099_60min_R1 2 DNLEFFLAGIGR 12 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 ; 130.1 0.00052367 30880000.0 130222.0 146078.0 134677.0 113816.0 178711.0 143273.0 128018.0 118671.0 158780.0 115216.0 False True 122998.32606887884 139060.1936124517 143358.49491081887 124633.0384199718 192774.5389735032 142378.78006257914 140959.30877527926 118259.35799901962 129949.55451807368 114195.27587669164 1.0770876914531278 1.217740335971597 1.255380258160747 1.091402752549509 1.6881130808043379 1.2468009641337539 1.23437075389605 1.0355888813361804 1.137959110133361 1.0 16.80114344378694 -7.170792444672109 4.019241078052358 1.0645684636817025 1.2698584085613263 0.24653433402983582 0.1607050823910287 0.3539224035089284 10.350761489241567 0.08455511130046124 0.04592517826216987 6.748504709974398e-08 7.170792444672109 0.2052899448796237 DNLEWLAR ddPTM_KYSE-520_SHP099_60min_R1 1 DNLEWLAR 8 0 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 0 110.55 0.016371 0.0 306590.0 325800.0 249070.0 165180.0 292750.0 325380.0 230810.0 241530.0 247900.0 280380.0 False True 289582.84152798704 310148.07896423014 265125.4507260906 180878.65753682214 315787.7594803511 323349.1827264175 254142.52728852362 240692.18880352564 202887.60905045026 277896.0513323393 1.042054538521209 1.1160578837923834 0.9540454045855578 0.6508860297568861 1.1363520926848172 1.1635616309629395 0.9145237079478739 0.8661230976458852 0.7300845336870745 1.0 18.084185809645582 -6.99210912304492 24.964481881844687 0.8569269406107696 1.0051791532987344 0.16544352192664458 0.14856883241027913 342.4072442970661 1083275.2908994444 0.06635682598214718 0.04464791700412078 1.0183354837419247e-07 6.99210912304492 0.14825221268796485 DNLS(ph)YIEHIFEISR ddPTM_KYSE-520_SHP099_60min_R1 1 DNLSYIEHIFEISR 14 0 Q15121-2;Q15121 Q15121-2 PEA15 Astrocytic phosphoprotein PEA-15 1 DNLS(0.996)Y(0.004)IEHIFEISR 49.049 0.06042 5693600.0 22173.0 21902.0 18480.0 15656.0 20044.0 17674.0 18480.0 19769.0 22707.0 24595.0 True False 20943.019489220344 20849.795044427763 19671.250369045443 17143.94153285196 21621.348765240513 17563.69001016258 20348.13874741958 19700.425953119295 18583.98119688815 24377.107434620444 0.8591265204614474 0.8553022584958878 0.8069558876828952 0.7032803862735609 0.8869530079903494 0.7204993478930388 0.8347232665726816 0.808152731244097 0.7623538291706884 1.0 14.573239326782954 -10.09448002440338 4.924615928932352 1.000006814672271 0.80376201745703 0.5160397456992647 0.05689842886470873 4.118228661965173e-06 7.571364273927285e-07 0.053293680213016933 0.012925167157148434 8.0448875057234e-11 10.09448002440338 -0.1962447972152409 DNLSYIEHIFEISR ddPTM_KYSE-520_SHP099_60min_R1 3 DNLSYIEHIFEISR 14 0 Q15121-2;Q15121 Q15121-2 PEA15 Astrocytic phosphoprotein PEA-15 0 ;; 134.85 1.2992999999999999e-05 186586000.0 204918.0 232923.0 152732.0 239708.0 257677.0 243101.0 191143.0 180228.0 150827.0 153010.0 False True 193550.79004609436 221733.0294554493 162577.34909984047 262489.7762491618 277954.71391842363 241583.71648526253 210465.59981590998 179602.83113353144 123440.61883925892 151654.4504399787 1.2762618537376669 1.4620937849971376 1.0720249134013036 1.7308412347123907 1.8328160704286856 1.5929879788188328 1.3877970557758696 1.1842898814539837 0.8139597517984732 1.0 17.210428310239163 -7.416379081475291 2.31939901259481 0.9127337533501009 1.4966235230395364 0.5484110953981782 0.2091903086285048 0.2597937464511504 2.600164867616438 0.17495473230988237 0.06394621198157723 3.8337246609444136e-08 7.416379081475291 0.5838897696894355 DNLTLWTSDQQDDDGGEGNN ddPTM_KYSE-520_SHP099_60min_R1 3 DNLTLWTSDQQDDDGGEGNN 20 0 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 ;; 283.12 7.8891e-43 932090000.0 1051680.0 1137900.0 4219300.0 641900.0 1660800.0 988810.0 995130.0 830530.0 3038660.0 1709170.0 False True 993341.2139278954 1083233.5759772793 4491282.82911869 702905.9830057285 1791495.5113406254 982638.4700095546 1095727.4519328815 827649.0852771587 2486915.9423850016 1694028.0835141402 0.5863782446081296 0.6394425136861891 2.6512446120738713 0.41493171798403733 1.0575358984747738 0.5800603186997593 0.6468177609310191 0.4885686921790929 1.4680488278718922 1.0 20.692026361119872 DNLTLWTSENQGDEGDAGEGEN ddPTM_KYSE-520_SHP099_60min_R1 6 DNLTLWTSENQGDEGDAGEGEN 22 0 P31946-2;P31946 P31946-2 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed 0 ;;;;; 287.03 5.461199999999999e-40 1685370000.0 1608990.0 1825890.0 5845330.0 800423.0 2421470.0 1642250.0 1590550.0 1220870.0 4282110.0 2460910.0 False True 1519736.1172579536 1738171.5036832336 6222129.324658675 876494.9612640503 2612025.9127203654 1632000.1085882913 1751338.3162720897 1216635.0869232016 3504586.7672086465 2439108.2519590072 0.6230703848578079 0.7126258140806971 2.55098531180864 0.35935057845836893 1.0708938033490218 0.6690970387548504 0.7180240216339211 0.49880323513564534 1.4368311715537365 1.0 21.217922358249055 DNNLLGK ddPTM_KYSE-520_SHP099_60min_R1 2 DNNLLGK 7 0 E9PKE3;P11142;E9PNE6;A8K7Q2;P11142-2;E9PS65;E9PM13;P54652 E9PKE3 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 122.13 0.018369999999999997 1801450000.0 1924050.0 2668200.0 1981220.0 1445380.0 2769100.0 2802000.0 2292900.0 2259600.0 2393600.0 2722500.0 False True 1817319.1110014147 2540015.6669501504 2108932.611264079 1582748.4806306558 2987012.415976229 2784511.6786508723 2524688.708547529 2251761.9749946063 1958982.577745697 2698380.7680729474 0.6734850516664688 0.9413110621760421 0.7815548629077194 0.5865549070604212 1.1069647587613842 1.0319194798588176 0.9356310044970187 0.8344863710997709 0.7259844870391318 1.0 21.36366251043862 -5.762259663026045 24.99999999006061 0.935349737433666 0.7622559943418714 0.34514393825493583 0.12967221740838075 30.808083290567843 938956.2295914502 0.042047507977556485 0.05052761947918115 1.7287824176904504e-06 5.762259663026045 -0.1730937430917946 DNPAQDFSTLYGSS(ph)PLER ddPTM_KYSE-520_SHP099_60min_R1 2 DNPAQDFSTLYGSSPLER 18 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 DNPAQDFSTLYGS(0.162)S(0.838)PLER;DNPAQDFSTLYGS(0.29)S(0.71)PLER 150.69 5.205399999999999e-06 110300000.0 510420.0 466190.0 436650.0 344420.0 415900.0 423000.0 422670.0 460820.0 556470.0 500710.0 True False 482105.9851029566 443793.5326345441 464797.15766470256 377153.57324635156 448628.9638527013 420359.90009611694 465397.608461679 459221.52297619666 455429.0754671399 496274.09894648497 0.9714510310459378 0.8942508456045779 0.9365734755277312 0.7599702947362993 0.9039943144425084 0.8470317128951069 0.9377833931886591 0.9253384852263188 0.9176966447250564 1.0 18.920777635304844 -8.116630543029848 0.804529154689515 0.9981319806101789 0.8868168811964722 0.2525061705110263 0.05495565634626488 1.1006214599087836 1.568664595340249 0.054147833707399076 0.01965634694118828 7.644858598200374e-09 8.116630543029848 -0.11131509941370676 DNPS(ph)PEPQLDDIKR ddPTM_KYSE-520_SHP099_60min_R1 1 DNPSPEPQLDDIKR 14 1 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 1 DNPS(1)PEPQLDDIKR 107.72 0.00041955 0.0 257540.0 223250.0 184510.0 208820.0 208750.0 252200.0 243890.0 251460.0 248210.0 250980.0 True False 243253.7428067379 212524.7348949182 196403.80982643808 228666.1900159774 225177.43737497288 250625.9262511601 268544.78133702197 250587.74395120516 203141.3208649145 248756.51245948506 0.9778788921007912 0.854348426071989 0.7895423837734754 0.9192369990844771 0.9052122300180885 1.0075150345741382 1.0795487470132459 1.007361541909454 0.8166271461857711 1.0 17.924374770424816 -6.067607543714358 2.879446198570396 0.9882581046031265 0.8770903900128737 0.26412469107467207 0.07685032392048671 0.35837690273210976 5.846256569478665 0.027899077795074383 0.029079094043411538 8.558397551173152e-07 6.067607543714358 -0.11116771459025276 DNS(ph)NS(ph)DS(ph)EGEDRRPAGPPR ddPTM_KYSE-520_SHP099_60min_R1 5 DNSNSDSEGEDRRPAGPPR 19 2 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 3 DNS(1)NS(1)DS(1)EGEDRRPAGPPR;DNS(1)NS(1)DS(1)EGEDRRPAGPPR;DNS(1)NS(1)DS(1)EGEDRRPAGPPR;DNS(1)NS(1)DS(1)EGEDRRPAGPPR;DNS(1)NS(1)DS(1)EGEDRRPAGPPR 152.09 2.183e-05 0.0 1179620.0 1051430.0 954070.0 1039060.0 1058960.0 1090100.0 1078060.0 1202700.0 1256830.0 1025970.0 True False 1114184.12708583 1000917.7245713954 1015570.8787659745 1137811.949995219 1142294.127341804 1083296.2815479373 1187040.8256516852 1198528.1144122907 1028621.354106 1016880.7039925812 1.0956881399275316 0.9843020136398396 0.998711918495981 1.118923729723482 1.1233315007914024 1.0653130473364165 1.1673353825979822 1.1786319768941498 1.0115457497298568 1.0 19.955719007759143 -5.265560110403143 24.932180186677126 1.1054106712502791 1.0220408215667276 0.19109480532641376 0.06214662142538964 433.19428884510006 2621018.7681047684 0.016914348091882477 0.026180081677674293 5.425501521352676e-06 5.265560110403143 -0.08336984968355154 DNS(ph)NSDS(ph)EGEDRRPAGPPR ddPTM_KYSE-520_SHP099_60min_R1 1 DNSNSDSEGEDRRPAGPPR 19 2 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 2 DNS(0.5)NS(0.5)DS(1)EGEDRRPAGPPR 69.619 0.011093 1310100000.0 244620.0 192780.0 189150.0 205370.0 208690.0 200340.0 199260.0 213240.0 227890.0 197200.0 True False 231050.44096211973 183518.55943132064 201342.91165070032 224888.3030532578 225112.71571632655 199089.60374765028 219403.14539019603 212500.32021059003 186510.9206393995 195452.96141927832 1.1821281155545096 0.9389397740443725 1.0301348733150535 1.1506006428361857 1.151748809952402 1.018606227820569 1.122536818050767 1.0872197518396376 0.9542496531393214 1.0 17.5764619183249 -7.755538744780175 24.951065871752363 0.9771248121309779 1.0819437497689939 0.2733229644167874 0.07035022887987152 172.6040119044898 729886.3118540002 0.050980661903716175 0.018133192546722233 1.7557442517309453e-08 7.755538744780175 0.10481893763801597 DNS(ph)PEPNDPEEPQEVSSTPSDKK ddPTM_KYSE-520_SHP099_60min_R1 3 DNSPEPNDPEEPQEVSSTPSDKK 23 1 G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58-7;Q9HB58;Q9HB58-6 G5E9C0 SP110 Sp110 nuclear body protein 1 DNS(1)PEPNDPEEPQEVSSTPSDKK;DNS(1)PEPNDPEEPQEVSSTPSDKK;DNS(1)PEPNDPEEPQEVSSTPSDKK 144.23 2.2839e-08 2550330000.0 2963870.0 2731940.0 2542280.0 2572500.0 2767220.0 2571310.0 2470710.0 2876100.0 3406270.0 2512930.0 True False 2799458.2227716367 2600693.501674459 2706159.436591823 2816989.626549672 2984984.470671964 2555261.5005109874 2720473.478605902 2866123.4803867876 2787777.2330789757 2490667.395229959 1.1239791503807628 1.0441753510144383 1.0865197985787132 1.131017988168422 1.1984677184873034 1.0259344565254827 1.092266869440721 1.1507451721076405 1.1192892468974507 1.0 21.248100945663907 -10.518543410157594 6.035140346437589 0.9998667346850553 1.1072445473272212 0.31870024975017586 0.04737844442845617 8.776377974603421e-05 7.001336890871627e-06 0.04739086996740961 0.011479748337110069 3.0300974075016694e-11 10.518543410157594 0.10737781264216595 DNS(ph)PPPAFKPEPPK ddPTM_KYSE-520_SHP099_60min_R1 13 DNSPPPAFKPEPPK 14 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 DNS(1)PPPAFKPEPPK;DNS(1)PPPAFKPEPPK;DNS(1)PPPAFKPEPPK;DNS(1)PPPAFKPEPPK;DNS(1)PPPAFKPEPPK;DNS(1)PPPAFKPEPPK;DNS(1)PPPAFKPEPPK;DNS(1)PPPAFKPEPPK;DNS(1)PPPAFKPEPPK;DNS(1)PPPAFKPEPPK;DNS(1)PPPAFKPEPPK;DNS(1)PPPAFKPEPPK;DNS(1)PPPAFKPEPPK 268.13 1.2109000000000002e-24 53374420000.0 46866720.0 39645850.0 38505770.0 41656850.0 44206210.0 41240860.0 43168660.0 45773280.0 49881490.0 43299020.0 True False 44266929.615109935 37741203.85636593 40987913.5456103 45615904.49941132 47684987.22807144 40983460.49521973 47532569.438321546 45614503.17524385 40824268.826034494 42915424.36892784 1.0314922959764703 0.8794321484955835 0.9550858263279084 1.0629256303577117 1.111138662363943 0.9549820629268457 1.1075870770775058 1.062892977198898 0.9512726351039557 1.0 25.354992928745965 -5.227206266431301 8.57692889578131 1.0411982881523139 0.9474943554839458 0.2522157669054458 0.06261144885930883 0.4218203546704355 98.90985330229428 0.0165449444023337 0.028439822388940234 5.926437839265202e-06 5.227206266431301 -0.09370393266836807 DNSNS(ph)DS(ph)EGEDRRPAGPPR ddPTM_KYSE-520_SHP099_60min_R1 1 DNSNSDSEGEDRRPAGPPR 19 2 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 2 DNS(0.453)NS(0.551)DS(0.995)EGEDRRPAGPPR 61.801 0.016211 1506400000.0 540940.0 528060.0 476320.0 476400.0 496710.0 539470.0 520060.0 580810.0 613910.0 491050.0 True False 510932.9798628445 502691.204965781 507024.34933894605 521676.91276511713 535798.2511066968 536102.967623764 572632.7400964841 578795.3056720739 502439.4194117066 486699.6790311196 1.049791076254594 1.032857071051487 1.0417601884354784 1.0718661532788087 1.1008806337684842 1.1015067211282987 1.17656280611574 1.1892247531872024 1.0323397385671598 1.0 18.892672297624493 -5.6342022487051775 1.7939991989251696 1.1157653984423785 1.0397517908888865 0.15969365534752522 0.05460757724563932 0.49078539936349863 3.2345717280109416 0.01844062464717299 0.027060426904535508 2.3216553616135736e-06 5.6342022487051775 -0.07601360755349207 DNSNS(ph)DS(ph)EGEDRRPAGPPREPVR ddPTM_KYSE-520_SHP099_60min_R1 2 DNSNSDSEGEDRRPAGPPREPVR 23 3 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 2 DNS(0.434)NS(0.566)DS(1)EGEDRRPAGPPREPVR;DNS(0.407)NS(0.593)DS(0.999)EGEDRRPAGPPREPVR 88.595 0.0080029 1769170000.0 386130.0 336300.0 339190.0 321910.0 283330.0 386050.0 283450.0 298840.0 467460.0 262620.0 True False 364710.5991689284 320143.643203409 361054.73012318835 352504.22961422923 305626.45907281956 383640.5187520235 312103.89220541524 297803.39378978004 382581.0477076381 260293.39111526817 1.4011519754929935 1.229933813654288 1.3871067896737306 1.3542573174980324 1.1741614251645602 1.4738772932660913 1.199046548466547 1.1441066271940072 1.4698069976667836 1.0 17.98977915641983 -12.481534929770149 0.33894268176176434 8.322013467612757e-16 1.3201585930183042 0.3879127019825003 0.1166466954686258 128.12019586282923 2.8859942702563104 90.84634930007367 0.09196206370898158 3.2996286833657517e-13 12.481534929770149 1.3201585930183033 DNTFFRES(ph)PVGR ddPTM_KYSE-520_SHP099_60min_R1 12 DNTFFRESPVGR 12 1 F8W0Q9;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8;F8WF16;B7Z8L1;F8W6A0;Q8NEY8-5;Q8NEY8-6;Q8NEY8-3;F8VWU8;F8VPY7 F8W0Q9 PPHLN1 Periphilin-1 1 DNTFFRES(1)PVGR;DNT(0.011)FFRES(0.989)PVGR;DNT(0.016)FFRES(0.984)PVGR;DNT(0.004)FFRES(0.996)PVGR;DNTFFRES(1)PVGR;DNTFFRES(1)PVGR;DNTFFRES(1)PVGR;DNTFFRES(1)PVGR;DNTFFRES(1)PVGR;DNTFFRES(1)PVGR;DNTFFRES(1)PVGR;DNTFFRES(1)PVGR 205.98 5.583100000000001e-09 80429050000.0 20616020.0 19694680.0 18524060.0 16826230.0 18261190.0 18417270.0 16726470.0 17794850.0 22295290.0 17425630.0 True False 19472408.273583006 18748518.010482628 19718150.54714394 18425389.840209503 19698241.76104183 18302320.986390557 18417344.822215978 17733123.818699226 18247027.35452365 17271252.475135006 1.1274462174423627 1.0855332024978734 1.141674616564819 1.0668241846812256 1.1405219042105315 1.0596985373666417 1.0663583807098513 1.0267422032205924 1.056497053748328 1.0 24.04186937210135 -7.055758508501185 0.5748980432270343 1.0061172534272718 1.1170600600702012 0.6616070284849104 0.026162106190206987 0.4698800980473739 0.32254396958731674 0.023393949048820195 0.015190786381086993 8.795114373756664e-08 7.055758508501185 0.11094280664292944 DNTRPGANS(ph)PEMWSEAIK ddPTM_KYSE-520_SHP099_60min_R1 3 DNTRPGANSPEMWSEAIK 18 1 F1T0B3;A0A087X2G1;Q92499-3;Q92499;Q92499-2 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 1 DNT(0.095)RPGANS(0.9)PEMWS(0.006)EAIK;DNTRPGANS(1)PEMWSEAIK;DNTRPGANS(1)PEMWSEAIK 198.47 6.009e-13 1940670000.0 2086520.0 1935330.0 1419410.0 1454210.0 1582150.0 1637910.0 1462770.0 1626460.0 1833820.0 1697850.0 True False 1970776.5762255013 1842353.8418104448 1510907.439736297 1592417.6811758198 1706656.2037979073 1627687.1961381342 1610641.0668594681 1620818.1898786186 1500844.5148402452 1682808.36990731 1.1711235880851083 1.094809055360191 0.8978487787171623 0.946285809871228 1.0141714495346317 0.9672445331536995 0.9571149607178285 0.9631626624057581 0.8918689386616924 1.0 20.68243946819941 -4.600819866757605 4.674505323037714 0.956189750822892 1.1551514854211695 0.795345637695696 0.036981278765041384 0.07885097089213318 3.0876828404247405 0.009684488491590782 0.02835370215873643 2.507148932876868e-05 4.600819866757605 0.19896173459827748 DNYNHPNKR ddPTM_KYSE-520_SHP099_60min_R1 2 DNYNHPNKR 9 1 O14647;O14647-2 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 0 ; 160.59 0.00028584 421840000.0 274300.0 243930.0 156073.0 173219.0 286970.0 239360.0 194130.0 233624.0 193122.0 177432.0 False True 259084.03219650677 232211.23665360542 166133.7153056294 189681.68167980848 309552.9063640526 237866.06545391591 213754.55492622074 232813.61287225178 158055.91300944373 175860.0905200072 1.4732395020974438 1.3204316907091964 0.944692538337621 1.0785942456809372 1.760222603370237 1.3525869613199957 1.215480751170786 1.323857005781338 0.8987594202987294 1.0 17.42406859089292 -7.758536653014535 24.967238256081615 0.9493796066529708 1.3026441842571084 0.3227162702813495 0.2080364229379298 89.57722542335134 770538.0025587656 0.1660755029612869 0.056494815798816156 1.7436661916096576e-08 7.758536653014535 0.35326457760413754 DPALCQHKPLT(ph)PQGDELSEPR ddPTM_KYSE-520_SHP099_60min_R1 2 DPALCQHKPLTPQGDELSEPR 21 1 Q8NFA0;K7EQL6 Q8NFA0 USP32 Ubiquitin carboxyl-terminal hydrolase 32;Ubiquitin carboxyl-terminal hydrolase 1 DPALCQHKPLT(0.998)PQGDELS(0.002)EPR;DPALCQHKPLT(1)PQGDELSEPR 185.8 8.0404e-13 1088380000.0 901600.0 850560.0 764400.0 640440.0 682450.0 994680.0 682400.0 832100.0 1017370.0 954060.0 True False 851586.4507049596 809697.8208834119 813674.4470832425 701307.2250446932 736154.932390661 988471.8331621893 751383.6515822033 829213.6393136006 832641.2538106365 945607.7706474487 0.9005704871924713 0.8562723848271884 0.8604777502263198 0.7416470621476754 0.7784992416957642 1.0453296428448255 0.7946039308324825 0.8769107710968215 0.8805355451346755 1.0 19.850882365523827 DPEEIEKEEQAAAEK ddPTM_KYSE-520_SHP099_60min_R1 1 DPEEIEKEEQAAAEK 15 1 C9J9K3;A0A0C4DG17;P08865 C9J9K3 RPSA 40S ribosomal protein SA 0 132.59 2.9983e-05 144730000.0 298610.0 282590.0 211440.0 173770.0 283050.0 288860.0 206510.0 237310.0 304000.0 270930.0 False True 282045.5080357231 269013.9522237624 225069.76071596125 190285.0485541443 305324.42466580204 287057.1175928238 227386.04614337732 236486.82699857053 248801.2632163653 268529.77098035056 1.0503323598200274 1.0018030821746289 0.8381557094927495 0.7086180718787722 1.137022623417587 1.0689955029747111 0.8467815144415257 0.8806726573936386 0.9265313946682326 1.0 18.034722518195885 -8.886224563898647 0.0017716823291933775 0.46591787972018056 1.4101201854243888 0.0 0.12304596675818114 5839808.422253317 3347.94847311232 897466.1010668852 886780.5678562267 1.29949746339987e-09 8.886224563898647 0.9442023057042082 DPFAHLPK ddPTM_KYSE-520_SHP099_60min_R1 2 DPFAHLPK 8 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 106.36 0.0027739 3117800000.0 9215300.0 7228700.0 5115900.0 5466200.0 9072100.0 8191900.0 5980700.0 7447500.0 6568800.0 6873400.0 False True 8704108.938754888 6881422.401500089 5445679.099729415 5985706.004527038 9786022.656811941 8140771.313468989 6585287.522007157 7421666.36075957 5376071.505972565 6812507.023424286 1.2776660499323484 1.010116008370904 0.7993649152954797 0.8786348379452151 1.4364789090364896 1.194974373674415 0.9666467130770138 1.0894177921932022 0.7891472973880765 1.0 22.69975438146318 -7.742075167655701 24.880278030579063 0.8945736415050075 1.0748705191277301 0.14095223004987067 0.1841385340633016 434.02166974100595 557660.791697687 0.1334404862337151 0.050268925703722274 1.8110266131442388e-08 7.742075167655701 0.18029687762272262 DPFS(ph)PDKK ddPTM_KYSE-520_SHP099_60min_R1 1 DPFSPDKK 8 1 H0YHD0;Q5PSV4-2;Q5PSV4 H0YHD0 BRMS1L Breast cancer metastasis-suppressor 1-like protein 1 DPFS(1)PDKK 59.426 0.040118 1393100000.0 202520.0 203860.0 160300.0 159800.0 174830.0 185570.0 131550.0 176850.0 195350.0 167170.0 True False 191285.81188638904 194066.25959990153 170633.19448906864 174987.34395437816 188588.1263533728 184411.78879630376 144848.35780427733 176236.5486271003 159879.36437275287 165689.0038562919 1.1544870657336934 1.1712681896996753 1.0298401856351616 1.0561192347209174 1.1382054449246501 1.1129995624588993 0.8742182910937746 1.063658689021733 0.9649364813094178 1.0 17.338118334036587 -6.723048187767704 24.989962474095044 0.981008207258098 1.1083724748380859 0.5557150481130598 0.05894553072358471 129.41641143097385 84240.74083743234 0.0228169797100635 0.017673573421617392 1.8921336625903614e-07 6.723048187767704 0.12736426757998787 DPGPPRPPAGATQDEELQGS(ph)PLSR ddPTM_KYSE-520_SHP099_60min_R1 2 DPGPPRPPAGATQDEELQGSPLSR 24 1 Q58EX7-2;Q58EX7;H3BPQ5;H3BME5;H3BQE6;H3BQP9;Q58EX7-3 Q58EX7-2 PLEKHG4 Puratrophin-1 1 DPGPPRPPAGATQDEELQGS(0.953)PLS(0.047)R;DPGPPRPPAGATQDEELQGS(0.807)PLS(0.193)R 64.0 0.0097747 792800000.0 95373.0 113104.0 82939.0 76045.0 106902.0 100793.0 74104.0 77277.0 114758.0 91989.0 True False 90082.46956863809 107670.31406743497 88285.38064709201 83272.29393623705 115314.57921082343 100163.91349973508 81595.15550534519 77008.94412358737 93920.8400137619 91174.04902635903 0.9880275202277639 1.1809315832436789 0.9683169892078404 0.9133332875472325 1.2647741374026857 1.0986011323329188 0.8949383774955029 0.8446366586321461 1.0301268948427282 1.0 16.47633562643208 -6.759656835235011 24.999243015826085 0.9294785262331066 1.0713322798617082 0.24521252337352917 0.1077893409348401 64.69370700326546 907316.0047396108 0.04375195068845805 0.03211513407609267 1.7391745226563634e-07 6.759656835235011 0.14185375362860164 DPGVGMDRDS(ph)HLLY(ph)S(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 DPGVGMDRDSHLLYSK 16 1 H7BZK9;Q96N11 H7BZK9 C7orf26 Uncharacterized protein C7orf26 3 DPGVGMDRDS(1)HLLY(1)S(1)K 43.791000000000004 0.054533000000000005 0.0 68316.0 67017.0 52925.0 67058.0 65721.0 54764.0 53276.0 56051.0 79748.0 61087.0 True False 64526.37529543034 63797.402725432126 56336.63018299405 73431.17215827719 70892.86879866161 54422.19756232566 58661.65800365398 55856.57216340175 65267.77348348244 60545.81670496683 1.0657445684457498 1.0537045529720068 0.9304793171345976 1.212819913159307 1.1708962345675316 0.8988597482716123 0.9688804478351635 0.9225504783523648 1.077989810617721 1.0 15.885739662714471 -6.266943661175882 24.998381855688184 0.9685170261659732 1.0832187522496126 0.31549072696614855 0.08302423905526633 609.8485751335173 2769694.391089253 0.03028941556654817 0.02745740428334945 5.408244768160797e-07 6.266943661175882 0.11470172608363938 DPGVLDR ddPTM_KYSE-520_SHP099_60min_R1 3 DPGVLDR 7 0 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 0 ;; 102.77 0.034523000000000005 3288140000.0 1117660.0 1352140.0 1602550.0 754040.0 1547570.0 1565190.0 1170670.0 1331040.0 1492320.0 1552460.0 False True 1055661.1718000274 1287181.1647964832 1705852.9371706576 825703.7348896082 1669354.9545311965 1555421.0686322502 1289012.7482381857 1326422.9329070721 1221352.306325809 1538706.4121956036 0.6860705612409117 0.8365346076382335 1.108627951147971 0.5366220146645122 1.084908037881748 1.0108627976748314 0.8377249474114258 0.8620376976361456 0.7937526591463558 1.0 20.553286558576612 -4.3404531315263535 4.158195935654613 0.898055414352325 0.6824191960703528 0.14588591788392358 0.1580742333212372 0.3970884313455985 11.647632298722742 0.038474717154129416 0.20282814113031972 4.566115244421046e-05 4.3404531315263535 -0.21563621828197221 DPHLACVAYER ddPTM_KYSE-520_SHP099_60min_R1 2 DPHLACVAYER 11 0 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 ; 85.554 0.0061198 257540000.0 127545.0 136180.0 98832.0 83201.0 134941.0 112216.0 89486.0 103004.0 120721.0 111646.0 False True 120469.82459534598 129637.70838965279 105202.86885679122 91108.39802470732 145560.08899073637 111515.6183195883 98532.11817919854 102646.70316531436 98801.10952875915 110656.90329927369 1.0886787990942874 1.1715284317964796 0.9507122079159225 0.8233412946529232 1.315418059342094 1.0077601577010717 0.890429021971784 0.9276122872127047 0.8928598811549034 1.0 16.755733930500867 -6.532739003578296 15.320370316060492 0.9255975596508489 1.065887332141687 0.22564632227651427 0.12405133410933218 3.346982693462126 5190.835149955425 0.04862478391617058 0.03794555795732572 2.932655143185454e-07 6.532739003578296 0.14028977249083818 DPHLLDPTVEY(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 2 DPHLLDPTVEYVK 13 0 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 DPHLLDPTVEY(1)VK;DPHLLDPTVEY(1)VK 176.87 6.3483e-08 1316730000.0 988260.0 920650.0 791090.0 903610.0 866600.0 795380.0 863400.0 1029250.0 942800.0 982670.0 True False 933439.2477525318 876420.5920761761 842084.9271887523 989488.8227197471 934796.4897204865 790415.7383887687 950680.8979719726 1025679.7719787554 771611.2860539115 973964.3083056918 0.9583916369341527 0.899848777416492 0.864595262893815 1.015939510597736 0.959785160245408 0.8115448704314184 0.9760941852435814 1.0530979043400757 0.7922377436974117 1.0 19.893509379009465 -10.979688825928566 2.5668876988789187 1.0632059836582384 0.9286914953406069 0.07044726571933968 0.08029214705178235 59637752.810081676 28076876.782141484 22368308.56047407 0.01981506716287281 1.0478790895101401e-11 10.979688825928566 -0.13451448831763146 DPHYQDPHSTAVGNPEYLNTVQPTCVNS(ph)TFDSPAHWAQK ddPTM_KYSE-520_SHP099_60min_R1 1 DPHYQDPHSTAVGNPEYLNTVQPTCVNSTFDSPAHWAQK 39 0 P00533;E9PFD7 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 DPHYQDPHSTAVGNPEYLNTVQPT(0.05)CVNS(0.372)T(0.372)FDS(0.207)PAHWAQK 173.63 2.2528e-10 592670000.0 28372.0 95770.0 141560.0 449450.0 100600.0 133100.0 95946.0 92782.0 119100.0 106750.0 True False 26798.14860182019 91169.06544629922 150685.1841040083 492165.5928679296 108516.64766429825 132269.27352906184 105645.15802272302 92460.1608974816 97474.4422666746 105804.2780502434 0.25328038804909686 0.8616765515190762 1.4241880090373307 4.651660612760992 1.0256357272507148 1.250131620067867 0.9984960907965855 0.873879228716772 0.921271276199123 1.0 16.691038436454843 -5.9294183378997065 24.999996743316693 1.0151457386409917 1.8459648278704148 0.11239481702419185 1.0788789512940984 112.7996320637752 39951.30118455152 0.35909480054300313 0.40717522850294663 1.1764721805811997e-06 5.9294183378997065 0.8308190892294232 DPLEEMVPLSHLEEEQPPAPES(ph)PESR ddPTM_KYSE-520_SHP099_60min_R1 1 DPLEEMVPLSHLEEEQPPAPESPESR 26 0 O60307 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 DPLEEMVPLSHLEEEQPPAPES(0.95)PES(0.05)R 74.76899999999999 0.012482 176640000.0 47126.0 48273.0 41479.0 46323.0 41462.0 52819.0 47072.0 67604.0 64015.0 52248.0 True False 44511.82683664808 45953.89262074976 44152.80270874653 50725.52399248223 44724.823513490446 52489.337028786744 51830.49713844881 67369.49750289219 52391.489686827656 51785.12336832891 0.8595485332737648 0.8873956385870956 0.8526155744518279 0.9795385371912676 0.863661619484401 1.0135987637887627 1.000876193145224 1.300943072467304 1.0117092763144713 1.0 15.660250085081627 -6.634144910432163 1.8165641453595498 1.1146169145420142 0.890797978754708 0.5034710436278833 0.08877718738811884 0.2571403750525495 1.731417315148304 0.041647102987913 0.02885101441017774 2.3219619013062315e-07 6.634144910432163 -0.22381893578730616 DPLGGLADMFGQMPGSGIGT(ph)GPGVIQDRFSPTMGR ddPTM_KYSE-520_SHP099_60min_R1 1 DPLGGLADMFGQMPGSGIGTGPGVIQDRFSPTMGR 35 1 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 DPLGGLADMFGQMPGS(0.062)GIGT(0.334)GPGVIQDRFS(0.271)PT(0.334)MGR 81.697 0.009634 32873000.0 8173.4 11323.0 8704.1 6516.1 8291.8 9312.7 6501.6 8036.8 10812.0 7597.2 True False 7720.005208731043 10779.026083830502 9265.18021305241 7135.388184863098 8944.31748611162 9254.57598492933 7158.845177501253 8008.922216603221 8848.813348339925 7529.894718532163 1.0252474300511787 1.4314975822041383 1.2304528229656992 0.9476079615431904 1.1878409752660097 1.2290445392486666 0.9507231435629898 1.0636167590619963 1.175157645506213 1.0 12.878413978229492 -5.033751308330522 23.206912234191226 1.0873560572600993 1.2540231078313158 0.21269891396408092 0.12965731053520127 343.20941680328167 235986.0380877753 0.03425356855117317 0.059398475323590307 9.252278389410642e-06 5.033751308330522 0.16666705057121645 DPLGGLADMFGQMPGSGIGTGPGVIQDRFS(ph)PTMGR ddPTM_KYSE-520_SHP099_60min_R1 4 DPLGGLADMFGQMPGSGIGTGPGVIQDRFSPTMGR 35 1 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 DPLGGLADMFGQMPGSGIGT(0.023)GPGVIQDRFS(0.876)PT(0.101)MGR;DPLGGLADMFGQMPGS(0.001)GIGT(0.022)GPGVIQDRFS(0.897)PT(0.08)MGR;DPLGGLADMFGQMPGSGIGTGPGVIQDRFS(0.998)PT(0.002)MGR;DPLGGLADMFGQMPGSGIGTGPGVIQDRFS(0.995)PT(0.005)MGR 272.47 5.4709e-42 1021629000.0 337859.0 497342.0 352340.5 317570.7 364361.7 394782.0 269371.2 328859.8 435729.0 349164.0 True False 319117.2877647809 473448.9437944383 375052.9323947325 347752.5238468873 393034.89285551483 392318.01910105237 296601.8697055686 327719.0621102545 356611.5974342222 346070.67860548175 0.9221159361165425 1.3680700881745804 1.0837466320638227 1.0048598316626611 1.1357070019317412 1.133635535613499 0.8570557635820188 0.9469714782853708 1.0304588613840846 1.0 18.40070718646182 -6.742843804639056 24.992270167082005 0.9542024736995587 1.1153086090455557 0.28628524194005334 0.11513517570573742 291.95182134766344 392380.3220185252 0.043292360474095036 0.03347273377528776 1.8078241986984473e-07 6.742843804639056 0.16110613534599705 DPLSEITEQEKDFLWSHR ddPTM_KYSE-520_SHP099_60min_R1 1 DPLSEITEQEKDFLWSHR 18 1 A0A2R8Y2F6;P42336 A0A2R8Y2F6 PIK3CA Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform 0 124.26 4.832399999999999e-05 38978000.0 32595.0 28085.0 20317.0 19836.0 27334.0 22673.0 20426.0 22010.0 21620.0 21330.0 False True 30786.890373478433 26735.754443555554 21626.666328349365 21721.207476089137 29485.030290814437 22531.489396877696 22490.859418549368 21933.65244717262 17694.352995848076 21141.032794488892 1.4562623629960052 1.264638047887855 1.0229711357331166 1.0274430623725954 1.3946825861081245 1.065770514425921 1.0638486604312138 1.0374920024195955 0.8369672933131579 1.0 14.367758237400198 -1.0000000000000002 0.3238589766336307 0.993479915225695 5.09179818039181 0.49528324525284295 0.12998107686510765 55.59271062878959 0.79355652916921 0.1293601740799591 135.4956082053344 0.09999999999999995 1.0000000000000002 4.098318265166115 DPMRSWIGKEHK ddPTM_KYSE-520_SHP099_60min_R1 1 DPMRSWIGKEHK 12 2 Q8N8R5 Q8N8R5 C2orf69 UPF0565 protein C2orf69 0 41.052 0.059940999999999994 2101700000.0 1552900.0 1376700.0 960670.0 792460.0 1502600.0 1604500.0 1143500.0 1656200.0 1220500.0 804270.0 False True 1466757.5413705984 1310561.2655311704 1022596.3253263464 867775.1601382141 1620846.0713754955 1594485.720340944 1259096.1394845403 1650455.0287599848 998887.9663012283 797144.7935125913 1.8400139514270444 1.6440692785011202 1.2828238152573395 1.088604187345178 2.033314505177024 2.0002460447805186 1.579507449250689 2.070458268299428 1.2530822184758463 1.0 19.60448227382163 -7.975681052790637 9.123508514811572 1.000047100798947 1.6745086445249961 0.3691580593780944 0.3042543240587337 0.23955593436337128 80.61107978841568 0.3139334710540778 0.0811303726005666 1.0575939243236374e-08 7.975681052790637 0.674461543726049 DPNNYRPR ddPTM_KYSE-520_SHP099_60min_R1 1 DPNNYRPR 8 1 P61221 P61221 ABCE1 ATP-binding cassette sub-family E member 1 0 107.0 0.0094918 0.0 244530.0 206610.0 167640.0 235410.0 277720.0 226680.0 213670.0 276660.0 300150.0 200720.0 False True 230965.43344153024 196684.14547206735 178446.34263348387 257783.29562140265 299574.98398935347 225265.20603732346 235269.84881824345 275700.33103292965 245650.32616576282 198941.77695779712 1.1609699931981934 0.9886517979267437 0.8969777256555767 1.2957725600092935 1.5058425061363776 1.132317251218232 1.1826065516050601 1.385834263918412 1.2347850206338224 1.0 17.6019867424688 -5.274042639841305 24.696692479780864 1.267419804486162 1.0128450342576656 0.35061047552578783 0.14340403971465984 633.047057091601 1240484.8322801737 0.04013791181716438 0.059994431436571655 5.320560184511972e-06 5.274042639841305 -0.2545747702284964 DPPSITPAVKS(ph)PLPGPSEEK ddPTM_KYSE-520_SHP099_60min_R1 1 DPPSITPAVKSPLPGPSEEK 20 1 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 DPPSITPAVKS(1)PLPGPSEEK 131.43 9.3034e-06 576950000.0 429580.0 450990.0 344870.0 314400.0 367900.0 481690.0 347990.0 465270.0 521800.0 561620.0 True False 405750.3410535003 429323.7634502085 367100.87201150984 344280.48147219326 396851.6369353415 478683.5940361671 383168.22525511606 463656.0869648347 427054.27350756346 556644.4837337477 0.7289218754704797 0.7712710284497514 0.6594889246887791 0.618492577457874 0.7129355424011751 0.8599449164129853 0.6883535837541719 0.8329483189248833 0.7671939379387267 1.0 19.08639667936524 -8.89710808589273 0.36234691896601184 1.0504469794315878 0.6963244890142067 0.6319062672577265 0.06402810421175523 2.830053193496622 0.5571814739876749 0.287747860671756 0.05760606085868744 1.267336415764092e-09 8.89710808589273 -0.3541224904173811 DPQT(ph)PVLQTK ddPTM_KYSE-520_SHP099_60min_R1 5 DPQTPVLQTK 10 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 DPQT(1)PVLQTK;DPQT(1)PVLQTK;DPQT(1)PVLQTK;DPQT(1)PVLQTK;DPQT(1)PVLQTK 156.52 0.00047571 3131290000.0 6468080.0 7216420.0 5429230.0 4843580.0 4928520.0 6790860.0 5447090.0 7118400.0 7272360.0 8120140.0 True False 6109282.708602188 6869732.351132742 5779206.852875142 5303912.3869245695 5316366.484557139 6748475.723798391 5997735.015675423 7093707.931847043 5951882.745276853 8048201.876973326 0.7590866633305297 0.8535735629082195 0.7180742905331444 0.6590183084372634 0.6605657469611654 0.838507262486348 0.7452267111782466 0.8814028326181552 0.7395295043860366 1.0 22.94023506274489 -8.954168377881627 0.47508146992900796 1.025422254473198 0.7419019602710741 0.5130797177477193 0.0708999543165901 3.3793178138527282 1.0039796682259927 0.24941403893959713 0.040713500568799556 1.1113007875430687e-09 8.954168377881627 -0.28352029420212377 DPS(ph)EKPPR ddPTM_KYSE-520_SHP099_60min_R1 1 DPSEKPPR 8 1 Q969S3 Q969S3 ZNF622 Zinc finger protein 622 1 DPS(1)EKPPR 56.011 0.043186 1741600000.0 640170.0 600620.0 650210.0 492580.0 570640.0 523520.0 490270.0 444080.0 730900.0 509690.0 True False 604658.4939527443 571765.3136510004 692123.5769727828 539394.6551004231 615546.1215025375 520252.5174901161 539831.2761741016 442539.5901290517 598186.984489609 505174.5431328191 1.1969298575557263 1.1318173518903414 1.3700681999544295 1.0677391852633535 1.218482066980758 1.029847058926983 1.0686034827217543 0.8760132436299356 1.1841194150045191 1.0 18.946422414786767 -6.277710790682616 1.8427802632675756 1.0183975320747771 1.2029950342526756 0.38320720618335946 0.10225214211717308 0.35428632496669205 2.370040002099878 0.04050836037121088 0.036622968804300035 5.275810760394372e-07 6.277710790682616 0.1845975021778985 DPS(ph)PEADAPVLGS(ph)PEKEEAASEPPAAAPDAAPPPPDRPIEK ddPTM_KYSE-520_SHP099_60min_R1 1 DPSPEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK 41 2 O15234 O15234 CASC3 Protein CASC3 2 DPS(1)PEADAPVLGS(1)PEKEEAASEPPAAAPDAAPPPPDRPIEK 172.84 5.6833e-11 671510000.0 472950.0 321560.0 318590.0 406470.0 373240.0 377440.0 407410.0 421300.0 498220.0 439540.0 True False 446714.5206975496 306111.7749286 339126.8211620234 445100.7865903381 402611.864554898 375084.2569557407 448594.97873843083 419838.60863215965 407755.807104136 435646.017556946 1.0254071027727385 0.7026617083411906 0.7784458195298296 1.0217028703404964 0.9241720303394488 0.8609840141754792 1.0297235844232002 0.9637150156601165 0.9359796501544644 1.0 18.732796829305922 -5.256245530966661 24.998798738402115 0.9578094230111655 0.8222205567800226 0.29385596892505483 0.08918937141765368 512.1526624294327 2465063.9829729022 0.023958745166091398 0.03991587098488166 5.543122406346305e-06 5.256245530966661 -0.13558886623114286 DPS(ph)PEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK ddPTM_KYSE-520_SHP099_60min_R1 1 DPSPEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK 41 2 O15234 O15234 CASC3 Protein CASC3 1 DPS(1)PEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK 124.05 1.8572e-05 361540000.0 113560.0 133190.0 111870.0 92648.0 124990.0 137060.0 89768.0 129930.0 126400.0 135970.0 True False 107260.60042375242 126791.35247773428 119081.31919832855 101453.23806436303 134826.00190418152 136204.55770017434 98842.62549125335 129479.30315588988 103448.94628469914 134765.41158305932 0.7959060055824858 0.9408300764145967 0.883619304089282 0.7528136253406152 1.0004495984571298 1.0106788982440649 0.7334420926717843 0.9607754811485032 0.7676223822530378 1.0 17.04009074142622 -4.238365774148555 22.416237960499252 0.89038978745613 0.7959055730185687 0.07580335605998123 0.1023586137033567 4247.649506067241 4126368.1597618326 0.02457333275752534 1.0692483410587232 5.776093648023726e-05 4.238365774148555 -0.09448421443756128 DPS(ph)PESNK ddPTM_KYSE-520_SHP099_60min_R1 1 DPSPESNK 8 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 DPS(0.979)PES(0.021)NK 81.191 0.017842 509200000.0 1306700.0 1088200.0 1233700.0 1092500.0 1091000.0 1408000.0 1480200.0 954970.0 1246400.0 1422700.0 True False 1234214.7461581293 1035921.2385785003 1313226.275989791 1196330.871527898 1176855.4930591413 1399212.1497289196 1629833.0613598737 951657.4319616726 1020085.179187097 1410095.9848438497 0.8752700237599804 0.734645903337719 0.9313027553476895 0.8484038564653997 0.8345924715114079 0.9922814934359697 1.1558312901233863 0.6748884063144515 0.7234154200503298 1.0 20.42736193914333 -3.237798855984237 11.599980693655294 0.8745511399505935 0.8603597825376569 0.0 0.14017799471617398 0.0 1665781.221896795 0.034185719419566746 19323031.768002283 0.0005783638553038548 3.237798855984237 -0.014191357412936645 DPSAS(ph)PGDAGEQAIR ddPTM_KYSE-520_SHP099_60min_R1 1 DPSASPGDAGEQAIR 15 0 P18206-2;P18206 P18206-2 VCL Vinculin 1 DPS(0.014)AS(0.986)PGDAGEQAIR 88.78 0.0060254 548520000.0 1577900.0 1526500.0 1304100.0 1187400.0 1329000.0 1352500.0 1303700.0 1531100.0 1621100.0 1402600.0 True False 1490370.7415343337 1453164.6486767859 1388164.3726337743 1300250.1389951722 1433584.7390243786 1344058.5458155985 1435490.7188858709 1525788.9714614255 1326749.1046054254 1390174.0552062867 1.0720749218076717 1.0453112998581693 0.9985543662212757 0.935314634973697 1.0312267975765452 0.9668275283818002 1.0325978344293438 1.097552472474402 0.9543762521222928 1.0 20.406834094620013 -9.839118401373957 13.195537112393437 0.9999999999770344 1.0149674487485538 0.008160217884300769 0.04917336769893013 0.0 0.0 0.04823381503861604 0.011698418478277623 1.4483769298136563e-10 9.839118401373957 0.014967448771519454 DPSASNGGGS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 1 DPSASNGGGSPAR 13 0 O60504-2;O60504;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 DPSAS(0.034)NGGGS(0.966)PAR 93.44200000000001 0.0044176 223610000.0 240080.0 189770.0 191690.0 146250.0 169460.0 184210.0 181530.0 185490.0 212880.0 169120.0 True False 226762.28381238523 180653.16434942264 204046.64411484436 160149.5560283341 182795.53790449313 183060.27706076988 199880.82396207124 184846.57848369153 174226.3582680915 167621.72837336885 1.3528215346120511 1.077743119000819 1.2173042605809485 0.9554224120133705 1.0905241204608354 1.0921035049406749 1.1924517537299633 1.1027602464040651 1.0394019913695864 1.0 17.354849648442308 -1.8159713458322817 1.3154252240752742 1.0864144733128775 199.03924726920374 0.5250017010644916 0.07549929688918275 925.0381818188932 2.80330837230232 0.021343297254762736 551219.4836833375 0.015276668483237625 1.8159713458322817 197.95283279589086 DPSASNGGGS(ph)PARR ddPTM_KYSE-520_SHP099_60min_R1 3 DPSASNGGGSPARR 14 1 O60504-2;O60504;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 DPSASNGGGS(1)PARR;DPSASNGGGS(1)PARR;DPSASNGGGS(1)PARR 153.68 1.062e-06 888110000.0 495410.0 430139.0 433197.0 343372.0 350477.0 355416.0 324013.0 309871.0 432939.0 363753.0 True False 467928.6197246487 409474.4767881985 461121.57175970613 376005.97164144355 378057.54595865094 353197.7169091291 356767.3961021463 308796.129825435 354328.19110404537 360530.431415552 1.2978893845033241 1.1357556564101325 1.279008737068887 1.0429243660933971 1.0486147992397816 0.9796613160291839 0.9895625029525777 0.8565050351311749 0.9827969020890838 1.0 18.459761513096733 -5.546470121769935 0.9745339730609942 0.9457914875758835 1.2544440391334108 0.7803925291901215 0.06165311427861341 0.2554746799122674 0.49849530634559513 0.02565874478195357 0.05277445780342948 2.8413836574056173e-06 5.546470121769935 0.30865255155752735 DPSIKPVTPS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 2 DPSIKPVTPSPSK 13 1 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 DPSIKPVT(0.203)PS(0.797)PSK;DPSIKPVT(0.019)PS(0.962)PS(0.019)K 119.23 0.00042538 622930000.0 1717900.0 1504750.0 1181350.0 1120920.0 1395120.0 1618810.0 1371210.0 1601210.0 1642680.0 1728390.0 True False 1622604.6624512514 1432459.551324202 1257501.7112268312 1227451.8997831147 1504908.0068530405 1608706.4063229181 1509825.2885199783 1595655.776235224 1344410.7205929572 1713077.809267073 0.9471867849046917 0.8361905942480621 0.7340598917482 0.7165184751930622 0.878481992301858 0.9390737522956945 0.8813524291496984 0.9314555168500566 0.7847925606882695 1.0 20.708159250515116 -5.979831602729137 24.543259604496107 0.9022437047779174 0.8041948432875949 0.2654877777061374 0.07750727234574459 275.9680730102015 335827.96010616334 0.024630969972640176 0.02792572342106171 1.047534649873726e-06 5.979831602729137 -0.09804886149032244 DPSPES(ph)NKKGESPSLESR ddPTM_KYSE-520_SHP099_60min_R1 1 DPSPESNKKGESPSLESR 18 2 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 DPS(0.16)PES(0.828)NKKGES(0.012)PSLESR 88.62700000000001 0.0011104 502380000.0 313010.0 356320.0 338210.0 238900.0 319230.0 261570.0 211240.0 238210.0 443300.0 247550.0 True False 295646.71133003465 339201.8523527758 360011.5577551332 261604.98417209616 344351.58482976124 259937.44460553513 232594.20070372883 237383.70510863222 362807.89468360116 245356.89959098547 1.2049659570319124 1.3824834472486065 1.4672974689331304 1.0662222444455263 1.4034721884886945 1.0594258610165668 0.9479831261785086 0.9675036875032057 1.4786944866372564 1.0 17.904522315909148 -6.274372352834134 24.321891129346035 1.0797692479002687 1.3049626151762146 0.2722270203659888 0.1746287503429839 731.610325186214 1375869.7767237462 0.06099916494586799 0.05415032658166697 5.316522389527067e-07 6.274372352834134 0.22519336727594585 DPSVEVTQDLIDES(ph)EEERFEEMPETSHLIDLPTCELNK ddPTM_KYSE-520_SHP099_60min_R1 2 DPSVEVTQDLIDESEEERFEEMPETSHLIDLPTCELNK 38 1 Q5MIZ7-3;Q5MIZ7-2;Q5MIZ7 Q5MIZ7-3 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B 1 DPSVEVT(0.001)QDLIDES(0.999)EEERFEEMPETSHLIDLPTCELNK;DPSVEVT(0.001)QDLIDES(0.999)EEERFEEMPETSHLIDLPTCELNK 204.33 2.1566000000000001e-16 525680000.0 199758.0 227367.0 182618.0 171176.0 172696.0 191528.0 163410.0 212702.0 250222.0 198203.0 True False 188677.02553229948 216443.948035175 194389.8484791308 187444.51557405893 186286.19269417186 190332.60270829595 179929.0775279133 211964.18640701994 204787.992383307 196447.07561960042 0.9604471073809883 1.1017926703795606 0.9895278301599499 0.9541731022610179 0.9482767412374004 0.9688747063705619 0.9159162943017155 1.078988759382027 1.042458849221344 1.0 17.58378116592645 -7.279057520071238 24.96744990215664 1.0455428508378257 0.9799873194464214 0.2542637555477767 0.04940870507960693 1225.0051913237476 1735999.7441197988 0.028520808062083493 0.013746565775319432 5.259476027216469e-08 7.279057520071238 -0.06555553139140435 DPTSLLGVLQAEADS(ph)TS(ph)EGLEDAVHSR ddPTM_KYSE-520_SHP099_60min_R1 1 DPTSLLGVLQAEADSTSEGLEDAVHSR 27 0 A0A0A0MQU1;Q27J81-2;Q27J81 A0A0A0MQU1 INF2 Inverted formin-2 2 DPTSLLGVLQAEADS(0.931)T(0.138)S(0.931)EGLEDAVHSR 114.08 0.00027744 194260000.0 125110.0 122020.0 109350.0 129780.0 116060.0 134660.0 112840.0 121780.0 138910.0 128550.0 True False 118169.89889939823 116157.97604424607 116398.8759661861 142114.2521802201 125193.26170893102 133819.53699040922 124246.96841227419 121357.57360366566 113687.44563613573 127411.14701038653 0.9274690768600101 0.9116782853762151 0.9135690141514642 1.1153988918146618 0.9825926902512329 1.0502969334347196 0.9751656062098366 0.9524878823496709 0.8922880635151017 1.0 16.959131976780643 DPTVHDDVLELEMDELNR ddPTM_KYSE-520_SHP099_60min_R1 1 DPTVHDDVLELEMDELNR 18 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 243.86 1.7819000000000004e-23 80739000.0 40270.0 39141.0 24634.0 21583.0 41691.0 38139.0 31985.0 35402.0 32298.0 34859.0 False True 38036.14282374525 37260.60760816124 26221.9470557936 23634.24183083442 44971.84451065867 37900.96035405628 35218.35594351814 35279.19872488893 26433.497366322885 34550.17637989162 1.100895764048327 1.0784491285505304 0.7589526249439035 0.684055605707115 1.3016386375622822 1.0969831220923907 1.0193393966004585 1.0211003943071504 0.7650756128037399 1.0 15.076405455191795 -7.720544671140925 24.99194277538424 0.8825368121199741 1.0041221493074388 0.07616239198508934 0.17398107685703326 391.13981152502384 239037.1985944968 0.12515839244359483 0.04730418898740915 1.903072479180258e-08 7.720544671140925 0.12158533718746467 DPVQEAWAEDVDLR ddPTM_KYSE-520_SHP099_60min_R1 4 DPVQEAWAEDVDLR 14 0 P14618;B4DNK4;P14618-3;P14618-2;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;; 222.94 3.3258000000000003e-13 973900000.0 244420.0 302254.0 550029.0 161303.0 267681.0 297295.0 246446.0 233953.0 298691.0 323605.0 False True 230861.53536080953 287733.2641474963 585484.7494175157 176633.18862248465 288745.9718034499 295439.47162901895 271359.16676117806 233141.4716480409 244456.2437873659 320738.11146088 0.7197820499387937 0.8970972075533679 1.8254293097592378 0.5507084512593956 0.9002546360589513 0.9211236864972727 0.8460459080625202 0.726890454602171 0.7621677469943633 1.0 18.291036265537276 DQDKTDTLEHELRR ddPTM_KYSE-520_SHP099_60min_R1 1 DQDKTDTLEHELRR 14 2 B8ZZD4;Q86VP1-3;Q86VP1-4;Q86VP1-2;Q86VP1 B8ZZD4 TAX1BP1 Tax1-binding protein 1 0 171.76 3.0185e-08 210670000.0 188060.0 214970.0 170200.0 131200.0 224090.0 193140.0 151630.0 165300.0 177540.0 134270.0 False True 177627.93691168417 204642.51852345146 181171.36432962865 143669.2085532817 241724.60810231208 191934.5416183546 166958.24016619232 164726.6128813101 145303.2114191889 133080.47226047923 1.3347408067805162 1.53773513910368 1.3613670078884361 1.0795664165669405 1.816379247807169 1.4422442177893682 1.2545660330946522 1.237797026741006 1.091844723354949 1.0 17.021939365447434 -7.462528270346945 1.3045955435988221 1.019315306194856 1.4259927004383648 0.41613435868234805 0.17653837053999843 0.46341764631611443 1.3926728157605992 0.16248748961964907 0.05619023905058664 3.4472416606474326e-08 7.462528270346945 0.4066773942435087 DQDMDS(ph)DRAYQYQEFTK ddPTM_KYSE-520_SHP099_60min_R1 1 DQDMDSDRAYQYQEFTK 17 1 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 1 DQDMDS(1)DRAYQYQEFTK 81.884 0.0035765000000000003 1652000000.0 479710.0 523940.0 434120.0 386630.0 381220.0 447450.0 397890.0 407010.0 554940.0 419660.0 True False 453099.5300218234 498769.13595002657 462104.0698165592 423375.1989554515 411219.84515490866 444657.29857685027 438112.6042321846 405598.1773068479 454176.8848989791 415942.1388905394 1.0893330770245966 1.1991310552963332 1.110981616455475 1.0178704184306466 0.988646753252203 1.0690364283909874 1.0533018015457185 0.9751312487566601 1.0919232326650647 1.0 18.666023325539914 -5.135381850803263 4.079534008122224 1.0282438829441336 1.1463079870509676 0.5704669788438972 0.04228614796695167 0.15223073185536024 4.278726684866515 0.011170183806475035 0.020475556512958848 7.3218048476833526e-06 5.135381850803263 0.11806410410683399 DQDS(ph)S(ph)DDERALEDWVSSETSALPRPR ddPTM_KYSE-520_SHP099_60min_R1 1 DQDSSDDERALEDWVSSETSALPRPR 26 2 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 2 DQDS(0.991)S(0.984)DDERALEDWVS(0.009)S(0.009)ET(0.003)S(0.003)ALPRPR 58.015 0.037291000000000005 175100000.0 113740.0 126560.0 102660.0 99202.0 107970.0 108060.0 81569.0 100170.0 158650.0 103840.0 True False 107430.61546493125 120479.86762956715 109277.6278618076 108630.12825383115 116466.62473473462 107385.55745717812 89814.79055672442 99822.53364985377 129843.15924104051 102920.05838629752 1.0438258309347623 1.1706160054569839 1.0617719186637822 1.0554806318327337 1.1316222178731357 1.0433880347611144 0.8726655616499543 0.9699035855108283 1.2615923589325078 1.0 16.651164655058764 -6.513768613898246 24.89895727733856 1.0141744234487697 1.0926414386368348 0.0915706344511088 0.09783535390683419 940.6350622427285 2570866.8505898686 0.036588430799627626 0.02993531237157242 3.063595240181603e-07 6.513768613898246 0.07846701518806509 DQDS(ph)SDDERALEDWVS(ph)SETSALPRPR ddPTM_KYSE-520_SHP099_60min_R1 3 DQDSSDDERALEDWVSSETSALPRPR 26 2 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 2 DQDS(0.82)S(0.193)DDERALEDWVS(0.461)S(0.394)ET(0.095)S(0.037)ALPRPR;DQDS(0.755)S(0.278)DDERALEDWVS(0.615)S(0.131)ET(0.105)S(0.117)ALPRPR;DQDS(0.996)S(0.004)DDERALEDWVS(0.688)S(0.119)ET(0.09)S(0.103)ALPRPR 101.2 0.002032 1070110000.0 1015410.0 1049210.0 962200.0 803790.0 912950.0 837560.0 780090.0 889800.0 1240990.0 900490.0 True False 959083.1831303478 998804.3767036815 1024224.9515744335 880181.959931725 984793.9710250627 832332.477362893 858949.1101447272 886713.4914808804 1015657.4988120953 892512.3591706196 1.0745881256160867 1.119093048338104 1.1475750907541602 0.9861846179358762 1.1033953321836318 0.9325724947230427 0.9623946394903914 0.9935027592277513 1.1379758368342485 1.0 19.767512621607352 -5.263283528370394 24.99930828239379 1.0141642599608904 1.114286185993041 0.3500346578267445 0.060618793686608594 183.05414633811046 2481491.1721489606 0.01715397813162039 0.02704180676885021 5.454016803331412e-06 5.263283528370394 0.10012192603215064 DQDS(ph)SDDERALEDWVSSETSALPRPR ddPTM_KYSE-520_SHP099_60min_R1 6 DQDSSDDERALEDWVSSETSALPRPR 26 2 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 DQDS(0.617)S(0.383)DDERALEDWVSSETSALPRPR;DQDS(0.559)S(0.441)DDERALEDWVSSETSALPRPR;DQDS(0.631)S(0.369)DDERALEDWVSSETSALPRPR;DQDS(0.324)S(0.324)DDERALEDWVS(0.155)S(0.155)ET(0.023)S(0.018)ALPRPR;DQDS(0.5)S(0.5)DDERALEDWVSSETSALPRPR;DQDS(0.5)S(0.5)DDERALEDWVSSETSALPRPR 247.52 1.8817e-29 603391000.0 586553.0 608901.0 575792.0 449666.0 490438.0 469413.0 412397.0 439628.0 787334.0 444659.0 True False 554015.7358255831 579648.4819809662 612908.4736197729 492402.1214429874 529032.680389495 466483.2193470886 454086.1133668614 438103.03307794663 644373.9926749787 440719.6671994672 1.2570705985191235 1.3152317110427945 1.3906991660128798 1.117268318366489 1.2003836446673886 1.0584579134199632 1.0303286809330083 0.9940628151719485 1.4620949338830815 1.0 18.749501753030916 -5.274149216234919 24.062755955924988 1.1196258979634994 1.320423610008899 0.31970974197966195 0.13213008465036932 524.1838189948355 992404.4129172105 0.036625552780736585 0.054760632332943794 5.319254672770776e-06 5.274149216234919 0.20079771204539965 DQDS(ph)VGEMKDEGEETLNYPDTTIDLSHLQPQR ddPTM_KYSE-520_SHP099_60min_R1 1 DQDSVGEMKDEGEETLNYPDTTIDLSHLQPQR 32 1 G3V5V3;O60524-4;O60524-5;O60524-3;O60524 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 DQDS(1)VGEMKDEGEETLNYPDTTIDLSHLQPQR 341.05 5.2372999999999995e-82 496680000.0 49039.0 58716.0 49040.0 55013.0 43158.0 48763.0 51664.0 63820.0 59497.0 58716.0 True False 46318.70891317709 55895.19522548723 52201.196866774255 60241.41897973842 46554.28906457047 48458.652029283585 56886.70131205005 63598.62331569994 48693.84459731603 58195.821920356786 0.7959112421604084 0.9604674937314563 0.896992174768381 1.0351502391732024 0.7999593016880455 0.8326826639823235 0.9775049038726814 1.092838303800178 0.8367240635239317 1.0 15.828627960326461 -6.868542773771763 8.589459872872219 0.98560513209057 0.8935781236196979 0.19001033098620834 0.08968104849370644 0.44470858149086306 32.62592567012129 0.03724234847705415 0.025091065195613247 1.3534967778715698e-07 6.868542773771763 -0.09202700847087208 DQELYFFHELS(ph)PGSCFFLPK ddPTM_KYSE-520_SHP099_60min_R1 2 DQELYFFHELSPGSCFFLPK 20 0 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 1 DQELYFFHELS(0.963)PGS(0.037)CFFLPK;DQELYFFHELS(1)PGSCFFLPK 138.08 1.7428999999999999e-06 127769000.0 83182.0 94760.0 85227.0 83593.0 74154.0 86032.0 64898.0 61576.0 81846.0 68233.0 True False 78567.72864079403 90207.58736234023 90720.86878802151 91537.65358684817 79989.49792145505 85495.04237605006 71458.52318344361 61362.40722794644 66984.82956975863 67628.50870447065 1.1617545639535924 1.333869237846686 1.3414589575597773 1.3535364795172098 1.1827777878557195 1.2641864209908023 1.0566331352316183 0.9073452661228063 0.9904821332446524 1.0 16.045343920381313 -6.8449525840817 2.626001033434309 0.9606080620837306 1.283004039908401 0.8268725466674793 0.0645724590083983 0.10867709823209652 1.5191343321150135 0.03174143509056569 0.02010276348715875 1.4290499725078865e-07 6.8449525840817 0.32239597782467044 DQGGFGDRNEYGSR ddPTM_KYSE-520_SHP099_60min_R1 3 DQGGFGDRNEYGSR 14 1 A0A087WTP3;Q92945;M0R0I5 A0A087WTP3 KHSRP Far upstream element-binding protein 2 0 ;; 165.34 3.6534e-08 2055840000.0 1336000.0 1245020.0 1079330.0 761700.0 1265720.0 1463820.0 1111240.0 1133770.0 1245050.0 1054850.0 False True 1261889.4167500278 1185207.370386881 1148905.33878906 834091.7389865437 1365324.9630383265 1454683.7564035407 1223574.98385728 1129837.2164939067 1018980.3051563659 1045504.8496608819 1.2069665838081305 1.1336220685837208 1.098900056907165 0.797788493527398 1.3059001720376342 1.3913696879315092 1.1703197591614776 1.0806618609759473 0.9746299172948653 1.0 19.995768323327685 -7.554928623091862 3.3909720702461916 0.9890458128575004 1.1546753880946918 0.17822077041356799 0.14607863475030833 0.48764476590795497 11.424858921701507 0.12232513645470712 0.0424526941817662 2.7865791091879512e-08 7.554928623091862 0.16562957523719146 DQGSTYSGDLESEAVSTPHS(ph)WEEELNHYALK ddPTM_KYSE-520_SHP099_60min_R1 1 DQGSTYSGDLESEAVSTPHSWEEELNHYALK 31 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5;H7C1I7;Q5VZL5-3 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 DQGSTYSGDLESEAVS(0.011)T(0.053)PHS(0.898)WEEELNHY(0.038)ALK 130.25 9.552200000000001e-05 83731000.0 41145.0 48365.0 42644.0 40939.0 40577.0 41130.0 40538.0 42443.0 55229.0 38533.0 True False 38862.60482947598 46041.47280265498 45392.900472812435 44829.830251240855 43770.17904845164 40873.29241360115 44635.976652754034 42295.77513927066 45200.80580979151 38191.62759822039 1.017568699567202 1.2055383783853288 1.1885563231384149 1.173813033653737 1.1460673922807938 1.0702160390646906 1.1687372196421901 1.1074619700481556 1.183526564652032 1.0 15.220968783611625 -6.023271360134892 24.14144034322808 1.1156837739618837 1.154400284049457 0.06787819437184339 0.0676878408132182 1460.1108387143847 1514700.8923745023 0.021414632852013733 0.02156652140923762 9.478260482793494e-07 6.023271360134892 0.038716510087573264 DQHHLGSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 DQHHLGSPSR 10 0 Q9H8M2-2;Q9H8M2-3;Q9H8M2-1;Q9H8M2-6;Q9H8M2 Q9H8M2-2 BRD9 Bromodomain-containing protein 9 1 DQHHLGS(0.153)PS(0.847)R 64.53399999999999 0.026779 427090000.0 235730.0 317200.0 282090.0 399690.0 271080.0 265170.0 221040.0 228090.0 338950.0 245000.0 True False 222653.58698389542 301961.23587309313 300273.9727599584 437676.41742881946 292412.45376578515 263514.9756701831 243384.88034251187 227298.80902660606 277405.22423416754 242829.49060711576 0.9169132893505765 1.2435113837208889 1.2365630385717217 1.8024022384371547 1.2041883917587743 1.08518522610804 1.0022871593314615 0.9360428523665708 1.142386880360398 1.0 17.88958411583692 -6.225521714689956 3.691612199146169 1.02325043604711 1.3107257109482766 0.2632839751799043 0.20901584345822985 0.3261942498776495 9.508524658535611 0.07728038875991204 0.07427088359076756 5.949470087116189e-07 6.225521714689956 0.28747527490116664 DQHLNNSS(ph)SSPQR ddPTM_KYSE-520_SHP099_60min_R1 1 DQHLNNSSSSPQR 13 0 A0A4W8VX11;A0A5H1ZRS1;E9PGW9;E7EV93 A0A4W8VX11 PCM1 1 DQHLNNS(0.003)S(0.596)S(0.307)S(0.094)PQR 155.2 2.1391e-06 400270000.0 117180.0 141490.0 127940.0 179860.0 130900.0 117720.0 121480.0 100640.0 131520.0 94764.0 True False 110679.79180746131 134692.6080191802 136187.21711123775 196953.84032311934 141201.0852808812 116985.26581398316 133760.3839305481 100290.90332955247 107639.28334939582 93924.46468527638 1.1783915104369127 1.4340524427848522 1.4499653265799926 2.096938651533181 1.5033472456193397 1.245524967387137 1.4241271896385521 1.067782538506968 1.1460196628224102 1.0 16.51921336791878 -7.014775464702319 1.1996164636455116 1.0474885741696114 1.5353952862084173 0.3987549034080511 0.23104988637063728 0.5388041871213993 1.4536297770040087 0.1906714655147288 0.08741752021437253 9.665504676641879e-08 7.014775464702319 0.48790671203880587 DQHLNNSSSS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 1 DQHLNNSSSSPQR 13 0 A0A4W8VX11;A0A5H1ZRS1;E9PGW9;E7EV93 A0A4W8VX11 PCM1 1 DQHLNNS(0.001)S(0.049)S(0.19)S(0.761)PQR 149.86 4.2358e-06 430150000.0 100480.0 98266.0 109990.0 154100.0 92199.0 89075.0 90963.0 82753.0 102780.0 89975.0 True False 94906.17409808596 93545.15385972697 117080.1313902224 168745.6176681455 99454.53675944985 88519.04988430644 100158.42775332952 82465.94915769532 84117.74287295385 89177.89149949067 1.0642343354645025 1.048972478344156 1.3128829289588115 1.8922360108627292 1.1152375895769848 0.9926120521117279 1.1231307005492677 0.9247353550421891 0.9432578126545443 1.0 16.444398468871714 -5.988043918932875 24.999990877561075 1.0059401019986514 1.3327691139378859 0.33444720815402385 0.22147685323198124 293.9965034833154 614738.5834607794 0.07468753295731938 0.08462776125244095 1.0279123430963326e-06 5.988043918932875 0.3268290119392345 DQIYDIFQK ddPTM_KYSE-520_SHP099_60min_R1 2 DQIYDIFQK 9 0 P60842;P60842-2;J3KT12;J3QS69;J3KSZ0;J3QL43;J3KTB5;J3KTN0;J3QR64 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ; 150.35 0.0020567 1238010000.0 1696010.0 2100240.0 1447130.0 1164200.0 2149730.0 2350180.0 1880070.0 1838360.0 1647570.0 2200140.0 False True 1601928.9443878846 1999341.31787549 1540414.3152898683 1274845.2179705056 2318901.5207094653 2335511.654864992 2070125.8233149976 1831983.1582364507 1348412.819859823 2180648.4712830186 0.7346112706764537 0.9168563132503179 0.7064019421633517 0.5846174817990863 1.0633999708101065 1.0710170326035435 0.9493166141065399 0.8401093447026676 0.6183540527586563 1.0 21.056325790191575 -4.240895702288187 21.761076393974093 0.8582837610752456 0.7346105500271346 0.049535208974448186 0.1658273877090152 3068.4205620196562 3249941.8113456634 0.04409464861494306 1.3956555588134574 5.742543553339937e-05 4.240895702288187 -0.12367321104811102 DQKLPHLER ddPTM_KYSE-520_SHP099_60min_R1 1 DQKLPHLER 9 1 P22102 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase 0 77.64 0.013865 404980000.0 700750.0 662780.0 517760.0 368280.0 690460.0 546300.0 388170.0 446140.0 597360.0 433290.0 False True 661878.0005895079 630939.0539469379 551135.638045291 403281.2204725809 744795.2738199944 542890.3390603041 427410.011774127 444592.4444698593 488894.4822201576 429451.38769451895 1.5412175150783785 1.4691745609068632 1.2833481363374462 0.9390613979327653 1.7342947191727054 1.2641485267396027 0.9952465494840966 1.0352567419949998 1.1384163521854125 1.0 18.712135307310966 -1.0000000001528349 0.15800434199001154 0.9200797535774076 3.2482180603385866 0.3592443983245849 0.20413604930586313 76.83596604884437 0.7873049157773301 0.6680704092708136 41.51572701999643 0.09999999996480848 1.0000000001528349 2.328138306761179 DQLIYNLLK ddPTM_KYSE-520_SHP099_60min_R1 3 DQLIYNLLK 9 0 P00338;P00338-3;P00338-5;P00338-2;P00338-4;F5GYU2;F5GXY2;F5GXH2;F5GZQ4;F5H5J4;F5H6W8;F5H8H6;F5GXC7;F5GWW2;F5GXU1 P00338 LDHA L-lactate dehydrogenase A chain 0 ;; 154.84 0.0015705 392145000.0 484904.0 667072.0 435710.0 376889.0 650664.0 704932.0 493538.0 580422.0 532389.0 541245.0 False True 458005.40848784096 635024.8598245138 463796.5637606493 412708.41724419006 701867.5550282615 700532.2579067517 543429.6375067077 578408.6515535135 435720.57803453127 536449.990382238 0.8537709324246558 1.183754070667497 0.8645662635396437 0.7693325093549205 1.3083559839905268 1.3058668477328146 1.0130108066914056 1.0782154197474747 0.8122296315525447 1.0 19.03308415895001 -5.7511942431457586 24.999691464446215 1.0975064769593097 0.9330423237218015 0.18794228479750352 0.16938239827771276 397.66814526452913 970366.0615245607 0.05302091981847511 0.067673056151119 1.7733961318994432e-06 5.7511942431457586 -0.16446415323750818 DQPAFTPSGILT(ph)PHALGSR ddPTM_KYSE-520_SHP099_60min_R1 2 DQPAFTPSGILTPHALGSR 19 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 DQPAFTPSGILT(1)PHALGSR;DQPAFTPSGILT(1)PHALGSR 196.55 7.0971e-13 766880000.0 965100.0 1191500.0 1030540.0 1126860.0 900140.0 1011430.0 906370.0 1040270.0 1132380.0 981420.0 True False 911563.979120848 1134258.5515220393 1096970.2573222981 1233956.4355971864 970975.8969039926 1005117.2901990906 997994.7249187599 1036661.5461708438 926768.3369768009 972725.3823332054 0.9371236688965039 1.1660624592743494 1.1277286243842795 1.2685558103124492 0.9982014600821699 1.0333001569139577 1.0259778793115717 1.0657288942993133 0.9527543475362279 1.0 19.891673038470497 DQQEAALVDMVNDGVEDLR ddPTM_KYSE-520_SHP099_60min_R1 8 DQQEAALVDMVNDGVEDLR 19 0 P09211;A8MX94 P09211 GSTP1 Glutathione S-transferase P 0 ;;;;;;; 241.93 2.8618000000000005e-25 1203527000.0 829929.0 892236.0 2692479.0 616109.0 910239.0 844982.0 671748.0 641290.0 1495134.0 946125.0 False True 783891.1839475558 849371.6432864598 2866040.5044587175 674663.8141200747 981869.6307485409 839708.1539078425 739654.8434687019 639065.5146682116 1223655.354860975 937743.0685741111 0.8359338610089698 0.9057615798514781 3.056317450382957 0.7194548664016652 1.0470561325945353 0.8954565296703968 0.7887606619085834 0.6814931894297498 1.3048940545320253 1.0 19.838833168531806 DQRPS(ph)SPIR ddPTM_KYSE-520_SHP099_60min_R1 2 DQRPSSPIR 9 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DQRPS(0.626)S(0.374)PIR;DQRPS(0.5)S(0.5)PIR 100.09 0.003910800000000001 2774980000.0 764260.0 674820.0 710910.0 675300.0 727650.0 641590.0 633070.0 655210.0 791350.0 680400.0 True False 721864.9742854617 642400.6342745294 756736.3960962176 739480.308963651 784911.9152378395 637585.5988242738 697066.8937677988 652937.2294371634 647660.7883101007 674372.1853431906 1.0704251894939911 0.952590643915139 1.1221346498908633 1.0965462767230334 1.16391501947607 0.9454506171540928 1.0336530908567334 0.9682149466245872 0.9603907195260487 1.0 19.363185507610375 -6.281676615118355 24.985281909077894 0.982812259057198 1.077117059644162 0.4476378053386576 0.05521004354040155 873.1083930110473 1077953.7052251871 0.020425673003638355 0.018038357800257625 5.227853211403518e-07 6.281676615118355 0.09430480058696389 DQRPSS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 1 DQRPSSPIR 9 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 DQRPS(0.327)S(0.673)PIR 93.839 0.0023103 3860800000.0 99405.0 106610.0 120550.0 83626.0 126280.0 119240.0 120870.0 115490.0 113010.0 137760.0 True False 93890.8064910453 101488.29557512763 128320.84588681982 91573.78989692639 136217.51756508532 118495.77893016778 133088.7191775219 115089.39214556875 92490.23275026772 136539.55357565827 0.6876454773159869 0.7432886143053903 0.93980712933645 0.6706759140396941 0.9976414452652029 0.8678494679895653 0.9747264854193023 0.8429014826227353 0.6773878361849025 1.0 17.05895941445647 -4.6044236656157675 5.723565358662366 0.8663338329783592 0.7006027800608449 0.2390889786771493 0.11273488878906847 0.26104396856909107 13.60908917956158 0.028099279723498453 0.07773483965850245 2.4864305568084464e-05 4.6044236656157675 -0.16573105291751433 DQS(ph)PFSK ddPTM_KYSE-520_SHP099_60min_R1 7 DQSPFSK 7 0 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 DQS(0.965)PFS(0.035)K;DQS(0.998)PFS(0.002)K;DQS(0.997)PFS(0.003)K;DQS(1)PFSK;DQS(1)PFSK;DQS(0.995)PFS(0.005)K;DQS(1)PFSK 175.65 0.00041660000000000004 54607990000.0 58295590.0 51820370.0 48164700.0 46619810.0 49190910.0 48540100.0 48270760.0 49353150.0 58354200.0 46323510.0 True False 55061817.41332245 49330841.64123883 51269473.62824478 51050542.725643 53061954.75900804 48237143.230864085 53150439.49801895 49181955.4417618 47758548.26967237 45913119.74054539 1.1992610766699423 1.0744388950262356 1.1166628170328676 1.111894443551846 1.1557035343897486 1.050617851791639 1.1576307556178187 1.0711961138709059 1.0401939258224115 1.0 25.45240312896269 -7.734374239398914 1.816356176660971 1.0029553614467648 1.1199404127771821 0.5151771574765158 0.040686525991834976 0.26274665644356493 1.6611080880419578 0.03551735534491662 0.010561259507775346 1.8434262208884405e-08 7.734374239398914 0.11698505133041737 DQSEQETSDADQHVTSNAS(ph)DSESSYR ddPTM_KYSE-520_SHP099_60min_R1 2 DQSEQETSDADQHVTSNASDSESSYR 26 0 A0A0C4DFT3;A0A590UJD9;A0A590UJ08;Q12959-4;Q12959-2 A0A0C4DFT3;A0A590UJ08 DLG1 Disks large homolog 1 1 DQSEQETSDADQHVTS(0.003)NAS(0.996)DS(0.001)ESSYR;DQSEQETSDADQHVTSNAS(0.843)DS(0.145)ES(0.009)S(0.002)YR 144.24 1.0004e-06 175916000.0 72239.0 95599.0 96256.0 202019.0 92060.0 82299.0 85105.0 78138.0 101330.0 81970.0 True False 68231.75866512374 91006.2805429755 102460.81577504525 221218.8250207728 99304.59825025151 81785.34141373595 93708.24394475894 77866.9575155463 82931.02632142844 81243.80957169508 0.8398394785378864 1.1201626440555492 1.2611522812039833 2.722900688520203 1.22230356717355 1.0066655151315005 1.153420112114073 0.9584355771356485 1.0207673268723871 1.0 16.309970269618447 -5.99187390652961 24.99995962124829 1.0421493074717527 1.50991761497712 0.17678897172386132 0.4644359813409596 358.37999518391223 1102548.5698993374 0.15432595835414972 0.1746970113502847 1.0188871697772375e-06 5.99187390652961 0.46776830750536735 DQSLALS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 DQSLALSPK 9 0 E7EX48;P51957-3;P51957;H7C5M0 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 DQS(0.002)LALS(0.998)PK;DQSLALS(1)PK;DQSLALS(1)PK;DQSLALS(1)PK;DQSLALS(1)PK 138.2 0.00044703 2260980000.0 4747960.0 4609940.0 4011480.0 3632080.0 3807470.0 4223140.0 4030830.0 4100350.0 5391950.0 4596920.0 True False 4484581.193976393 4388471.562738993 4270066.419394939 3977271.7911753263 4107096.227459108 4196781.81676576 4438305.633509806 4086126.8428788884 4412907.799998284 4556194.865149642 0.984282131626761 0.963187855793095 0.9372001298839738 0.8729371567483863 0.9014312049895644 0.921115523145633 0.9741255071108632 0.8968288152321344 0.9685511552090624 1.0 22.119398020710204 -7.9900689960562925 8.023188761605224 0.9999927785044413 0.9308326833343286 0.3055751251389832 0.033595206541361666 0.14737036929316863 66.15651164787033 0.034597203690510746 0.008947818772662573 1.023130435361891e-08 7.9900689960562925 -0.06916009517011279 DQTAS(ph)APATPLVNK ddPTM_KYSE-520_SHP099_60min_R1 7 DQTASAPATPLVNK 14 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 DQTAS(0.999)APATPLVNK;DQTAS(0.709)APAT(0.291)PLVNK;DQTAS(1)APATPLVNK;DQTAS(1)APATPLVNK;DQTAS(1)APATPLVNK;DQTAS(1)APATPLVNK;DQTAS(0.999)APAT(0.001)PLVNK 308.78 2.2058999999999998e-42 4675200000.0 6272280.0 7334420.0 5549410.0 4613490.0 4820260.0 5635600.0 4699350.0 5823170.0 7588350.0 6119860.0 True False 5924344.12491981 6982063.454011142 5907133.847969945 5051954.702503652 5199587.038472271 5600426.129980324 5174406.1592362635 5802970.782408091 6210496.9267365225 6065642.801579039 0.976705077881862 1.1510838475674063 0.9738677401894107 0.8328803504862671 0.8572194586068748 0.923302989177403 0.8530680636006519 0.956695105899977 1.0238810839833454 1.0 22.532229111209144 -4.991958598781758 20.929614327371915 0.9130067080300925 1.063540370784877 0.38712653939566455 0.07085546520851606 23.469502727357398 61074.263849692536 0.018495944164376305 0.03828772139572633 1.0186884948244101e-05 4.991958598781758 0.15053366275478441 DQVAIHEAMEQQTISITK ddPTM_KYSE-520_SHP099_60min_R1 1 DQVAIHEAMEQQTISITK 18 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 0 163.45 4.4032999999999995e-08 764450000.0 409940.0 588400.0 339990.0 382700.0 258330.0 301780.0 206380.0 505980.0 356570.0 371900.0 False True 387199.81100486976 560132.3807935946 361906.29940323374 419071.69293704926 278659.101303362 299896.47908039315 227242.9044746999 504224.8734766193 291825.8763982211 368605.25533382205 1.0504457150352016 1.5195995517923877 0.981826206127958 1.1369118776060938 0.7559824426567071 0.8135979472370686 0.6164939354131037 1.3679264366970985 0.7917029726934663 1.0 18.491717114558977 -5.198948236440484 1.8334032544617072 0.9012805283879922 1.2675606181261974 0.2548769100058059 0.23026866597885645 0.4660204415681518 3.035417356500648 0.06989329757295402 0.15417503908918453 6.324872330373836e-06 5.198948236440484 0.36628008973820514 DQVLHEHIQR ddPTM_KYSE-520_SHP099_60min_R1 3 DQVLHEHIQR 10 0 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;F8W9S7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 0 ;; 167.18 6.151e-05 1143820000.0 1003190.0 819040.0 688040.0 593450.0 974250.0 785320.0 634860.0 733920.0 773120.0 617270.0 False True 947541.0508903139 779692.088995896 732392.1593029232 649851.309572751 1050917.9322757719 780418.5265803379 699037.8444365156 731374.2028182164 632740.8967691982 611801.4680287935 1.5487721105725092 1.274420101520909 1.1971075546168097 1.0621931190628768 1.7177433974812104 1.2756074762207155 1.1425893544989278 1.1954436872711058 1.0342258556650263 1.0 19.222704043110173 -7.253541394280105 1.2576063159239892 1.0240541559408474 1.336122864175841 0.3420594319892354 0.17597569247271624 0.6214244501379053 1.739465554637087 0.15436774338234088 0.059718779379116835 5.577744359772951e-08 7.253541394280105 0.31206870823499355 DQY(ph)LMWLTQK ddPTM_KYSE-520_SHP099_60min_R1 2 DQYLMWLTQK 10 0 P27986-5;P27986-3;P27986-2;P27986;P27986-4 P27986-5 PIK3R1 Phosphatidylinositol 3-kinase regulatory subunit alpha 1 DQY(1)LMWLTQK;DQY(1)LMWLTQK 226.29 4.2530000000000003e-16 337030000.0 440540.0 389320.0 387030.0 366910.0 417620.0 391010.0 392830.0 396370.0 462320.0 372490.0 True False 416102.3680052821 370616.4828187665 411978.5730698954 401781.0160844865 450484.3180672399 388569.56155220454 432541.0900513434 394995.08498345333 378374.3421387826 369190.02839283523 1.1270682738010733 1.0038637403944546 1.1158984300397494 1.0882769987952463 1.2201963309472263 1.0524920275981793 1.1715947257142592 1.0698964072863861 1.0248769279764371 1.0 18.49400406159579 -7.688199742518491 2.998032536866014 1.0063988936947388 1.1089951476797335 0.3268707136564335 0.05634325610762241 0.30762950593126953 5.157353213442783 0.04889946754446603 0.014652712370644163 2.0502190167212948e-08 7.688199742518491 0.10259625398499472 DRAEAEAR ddPTM_KYSE-520_SHP099_60min_R1 2 DRAEAEAR 8 1 P35579;P35579-2;P35749-4;P35749-3;P35749;P35749-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35580 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 0 ; 120.87 0.0014401 261130000.0 292020.0 307480.0 153282.0 151396.0 345190.0 410690.0 216279.0 248090.0 240990.0 602370.0 False True 275821.06847256224 292708.19926311093 163162.8029798715 165784.63032113292 372354.4891375659 408126.73137227976 238142.59199962963 247229.43369464116 197232.29086352553 597033.4704367683 0.46198593903082424 0.4902710044865259 0.27328920581371674 0.2776806301995947 0.62367439611914 0.6835910406726593 0.39887645130751725 0.41409643836848375 0.33035382542160907 1.0 19.187452287467234 -10.163963180022185 4.254864622293964 1.0001517446284665 0.44185105766240534 0.6320709287958961 0.12832055416439975 112764352.27357158 194483406.41775787 225628.98941168128 0.03483846433573393 6.855463453841614e-11 10.163963180022185 -0.5583006869660612 DRAS(ph)PAAAEEVVPEWASCLK ddPTM_KYSE-520_SHP099_60min_R1 4 DRASPAAAEEVVPEWASCLK 20 1 Q8N3V7-3;Q8N3V7-2;Q8N3V7 Q8N3V7-3 SYNPO Synaptopodin 1 DRAS(1)PAAAEEVVPEWASCLK;DRAS(1)PAAAEEVVPEWASCLK;DRAS(1)PAAAEEVVPEWASCLK;DRAS(1)PAAAEEVVPEWASCLK 193.34 3.1634e-13 1342730000.0 1417030.0 1054080.0 968650.0 886120.0 948280.0 1001390.0 934920.0 989670.0 1272360.0 932890.0 True False 1338424.5211207292 1003440.4145936632 1031090.7288947987 970336.5783783066 1022904.2410248608 995139.9535632397 1029430.8375399087 986237.0657607146 1041331.497585441 924625.3203774367 1.4475317640818852 1.0852400345083064 1.115144379210708 1.0494376013650701 1.1062905357245745 1.0762629268653583 1.1133491749065338 1.0666342831257614 1.1262199667648776 1.0 19.81850934499551 -4.2613930014317445 24.516596659300646 1.0857142312373136 1.4475318703613795 0.9036086628009014 0.035791678529947364 0.7168343915073229 377426.02817278745 0.007970201519418104 0.04454954895626103 5.477810429659025e-05 4.2613930014317445 0.36181763912406595 DRAS(ph)QQQQTNSIR ddPTM_KYSE-520_SHP099_60min_R1 1 DRASQQQQTNSIR 13 1 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 1 DRAS(0.718)QQQQT(0.141)NS(0.141)IR 55.885 0.066813 0.0 207720.0 274290.0 258400.0 161450.0 248280.0 143730.0 130250.0 125360.0 311880.0 160700.0 True False 196197.35752044604 261112.6966823165 275056.87745461846 176794.1594582875 267818.2234800398 142832.92775606367 143416.94111750013 124925.15541924404 255250.45385499985 159276.32302270806 1.23180491486154 1.639369190140644 1.7269162938637372 1.1099839329734018 1.6814691499492795 0.8967618353149699 0.9004285030930375 0.7843297299212101 1.6025637019421195 1.0 17.28117229562208 -6.267719973093748 24.971674413797434 1.0148130858092 1.4802722170376883 0.3917901471081565 0.2740962557798622 509.4097585956089 2025410.1585215167 0.09361688446423351 0.08462043690548009 5.398586034671982e-07 6.267719973093748 0.46545913122848837 DRCPLPCIPTLIGT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 DRCPLPCIPTLIGTPVK 17 1 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 DRCPLPCIPTLIGT(1)PVK;DRCPLPCIPTLIGT(1)PVK 211.64 1.6868e-17 12093700000.0 7057300.0 6365900.0 6015000.0 5244300.0 5415900.0 5971700.0 5365200.0 6490700.0 7662700.0 6105800.0 True False 6665817.500621238 6060072.608589295 6402736.52434028 5742716.695243713 5842100.517744278 5934428.405210363 5907566.775306035 6468185.276640777 6271346.840947502 6051707.362240512 1.1014771702631314 1.0013822952512506 1.0580049796012951 0.948941571609239 0.9653640151531333 0.9806205174820731 0.976181831290482 1.0688199031233514 1.0362938036424936 1.0 22.528910795270775 -1.9397292151777206 1.1999359731574533 1.0003879356381042 30.962214959788476 0.37319924128199755 0.03762714140980103 540.2850370931303 3.442907164386583 0.012011222049167668 44111.59616156224 0.011488697243536372 1.9397292151777206 29.96182702415037 DRDAS(ph)PSKEER ddPTM_KYSE-520_SHP099_60min_R1 10 DRDASPSKEER 11 2 Q9BUQ8;F8W1J5;F8VVA2;Q9BUQ8-2 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 1 DRDAS(0.986)PS(0.014)KEER;DRDAS(1)PSKEER;DRDAS(0.997)PS(0.003)KEER;DRDAS(0.975)PS(0.025)KEER;DRDAS(0.999)PS(0.001)KEER;DRDAS(0.997)PS(0.003)KEER;DRDAS(0.877)PS(0.123)KEER;DRDAS(1)PSKEER;DRDAS(0.98)PS(0.02)KEER;DRDAS(0.876)PS(0.124)KEER 162.0 1.5101e-05 12243538900.0 15282180.9 13564227.9 12850027.1 12868263.9 13697070.5 13048768.6 12553380.9 13139269.0 16080364.9 13106865.9 True False 14434447.861204667 12912582.031362824 13678360.407636315 14091259.832071371 14774952.022679491 12967326.394972453 13822399.150563145 13093691.942567438 13160575.987171361 12990749.265113376 1.1111328197187471 0.993982854094454 1.0529308301230567 1.0847149417249868 1.137344099339796 0.9981969577225368 1.0640186234433116 1.007924306393205 1.0130728966122111 1.0 23.63098130745996 -7.074784032492506 1.2552009165772673 1.0038474643604696 1.0665028741200562 0.28199159951497454 0.04159579128875038 0.6987980314501612 2.0368263759523186 0.033053368730440555 0.014476839343045254 8.418136576713445e-08 7.074784032492506 0.06265540975958661 DRDDRDFDFCR ddPTM_KYSE-520_SHP099_60min_R1 1 DRDDRDFDFCR 11 2 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 0 143.55 5.4582e-05 411420000.0 93044.0 74752.0 95464.0 74034.0 80141.0 77470.0 69566.0 82093.0 87033.0 74898.0 False True 87882.66384138433 71160.8017149604 101617.76218780062 81070.16910086626 86447.64076008485 76986.48099396257 76598.41017873325 81808.23854365016 71230.00112338788 74234.46198976225 1.1838526404825878 0.958595237408392 1.3688758490876491 1.0920826652188405 1.164521684982467 1.0370719869240765 1.0318443499906689 1.1020250750242175 0.9595274110454425 1.0 16.179801466659335 -6.267376645909213 21.724196218417237 1.0328296953352103 1.1512965629120777 0.2866925792741526 0.10023652960684443 115.15015607819137 421324.43545443 0.03374350997200725 0.030658419028024252 5.402855520561715e-07 6.267376645909213 0.11846686757686742 DRDGYSYGSR ddPTM_KYSE-520_SHP099_60min_R1 3 DRDGYSYGSR 10 1 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;Q13247-2;A0A590UK01;A0A590UK80 Q13247;A0A590UK01;A0A590UK80 SRSF6 Serine/arginine-rich splicing factor 6 0 ;; 130.1 0.00039616 743410000.0 1348750.0 1207830.0 1063050.0 967500.0 1105410.0 1200730.0 1035210.0 1134880.0 1311310.0 1207310.0 False True 1273932.148833532 1149804.0338102093 1131575.9039401382 1059450.9091105175 1192399.4780774557 1193235.7986818203 1139859.1294759873 1130943.366162982 1073209.1594350373 1196614.1726729663 1.0646139565503012 0.9608811762957865 0.9456480875639746 0.8853738601005727 0.9964778165830211 0.9971767223986664 0.952570306709471 0.9451194812749958 0.8968715095841878 1.0 20.19052662478044 -6.98993275096202 23.96713661867016 0.9423662654135713 0.9703601208639728 0.059261021449245166 0.04858729212311324 399.48550649563816 951051.8445383454 0.020995244838829988 0.014134961972209882 1.0234514580231639e-07 6.98993275096202 0.02799385545040156 DRDMDELKK ddPTM_KYSE-520_SHP099_60min_R1 4 DRDMDELKK 9 2 P05023-2;P05023-4;P05023 P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 0 ;;; 152.62 0.00015893 3414340000.0 2510010.0 3414550.0 1900430.0 3267090.0 4380700.0 4275160.0 2965860.0 4934300.0 4961700.0 2875600.0 False True 2370774.7417191127 3250509.8926559617 2022934.758595509 3577593.251313577 4725436.167226559 4248477.140649918 3265678.072804213 4917184.0649742745 4060780.3542784117 2850124.4211829463 0.8318144724134958 1.140479997468614 0.7097706835394535 1.2552410781521932 1.6579753964794501 1.4906286578487629 1.1458019336042848 1.7252524235181963 1.4247730113455825 1.0 21.442593470322787 -5.472901909479669 5.867874879673183 1.4372188448534442 0.9239251472993985 0.502977713981823 0.22642011005129753 0.1629739096828701 13.21049734797612 0.06186979080827952 0.09071140467563642 3.365875830581039e-06 5.472901909479669 -0.5132936975540457 DRDNQDREENDKDPER ddPTM_KYSE-520_SHP099_60min_R1 4 DRDNQDREENDKDPER 16 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;;; 156.67 9.2426e-07 6776250000.0 3440040.0 4030330.0 2835350.0 2866710.0 3731790.0 4189540.0 3485640.0 4200430.0 3741230.0 2971530.0 False True 3249214.1236502733 3836706.8971513375 3018121.1977203987 3139161.25649221 4025460.6420194083 4163391.5268290495 3838002.5077681607 4185859.688717731 3061916.940733425 2945204.5560153555 1.103221885561056 1.3026962386416103 1.0247577512251624 1.0658550863914402 1.3667847395515236 1.4136171011706606 1.3031361437796685 1.4212458282968603 1.0396279383989453 1.0 21.489936407692426 -4.237283617413362 22.455451663766734 1.231517460435298 1.103221361354603 0.03345534273088435 0.1607064259859907 5824.215830441637 5413909.749368035 0.041180037121990185 1.9698163258889785 5.7905042217626776e-05 4.237283617413362 -0.12829609908069517 DRDVSEEHKK ddPTM_KYSE-520_SHP099_60min_R1 1 DRDVSEEHKK 10 2 Q14CX7-2;Q14CX7 Q14CX7-2 NAA25 N-alpha-acetyltransferase 25, NatB auxiliary subunit 0 113.77 0.00088122 281800000.0 148920.0 284080.0 77232.0 113540.0 324460.0 539350.0 134930.0 174240.0 136770.0 375540.0 False True 140659.1107353399 270432.37038722646 82210.49829556912 124330.80746295433 349993.1560751316 535983.7165882762 148570.04118989862 173635.60210792185 111936.01569112572 372213.0077656989 0.37789950324326704 0.7265527124120782 0.22086949295259206 0.3340313338571398 0.940303398250514 1.4399919008893636 0.3991532753831663 0.46649525536523484 0.3007310689195133 1.0 18.50576894872466 -5.7498964936419945 24.984734203141347 0.7472832685716163 0.4232486299450637 0.20026831811164592 0.33516864083110537 432.583576364127 936328.5998354134 0.10800377533698367 0.138226694243905 1.7787032817866862e-06 5.7498964936419945 -0.32403463862655263 DRDVTFSPATIENELIK ddPTM_KYSE-520_SHP099_60min_R1 1 DRDVTFSPATIENELIK 17 1 P55145;H7C2D6 P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor 0 180.62 5.8765e-09 112800000.0 75276.0 62571.0 54332.0 62690.0 76763.0 59225.0 54170.0 74882.0 60796.0 71715.0 False True 71100.29022101428 59564.99523901424 57834.32765427364 68648.03875156427 82803.8113782758 58855.35480660172 59646.03224825319 74622.25181959014 49756.978942441216 71079.66089342565 1.0002902282780943 0.8380033681973231 0.8136550868044855 0.9657901836995638 1.1649438156778622 0.8280196341235697 0.8391434553645994 1.049839727449968 0.7000171120265344 1.0 16.117149178128475 -9.972030508492985 13.622312008604395 1.0000003807480211 0.9146618560642169 0.040415135846646355 0.12892695646905253 0.0 0.0 0.123405262561493 0.029930172488124494 1.0665211971897395e-10 9.972030508492985 -0.0853385246838042 DRDYFDYSR ddPTM_KYSE-520_SHP099_60min_R1 6 DRDYFDYSR 9 1 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 0 ;;;;; 231.42 3.7531999999999995e-10 2805030000.0 2259420.0 2384030.0 1569010.0 1483240.0 2382480.0 2313290.0 1780430.0 1858340.0 1892250.0 1888880.0 False True 2134085.4685578956 2269497.6202980126 1670150.8951047622 1624206.683647633 2569967.6215431187 2298851.899038645 1960413.2397223085 1851893.8522798154 1548665.0997406794 1872145.9927264007 1.1399140221164232 1.212243932425884 0.8921050503505479 0.8675641162377009 1.372738895111744 1.2279234140767161 1.0471476302269378 0.9891823925456303 0.8272138528498854 1.0 20.836261512135355 -7.289910937106499 2.763236412067351 0.9166270375765223 1.1127611380595996 0.22870736294425098 0.14792444686581635 0.46206086234578986 6.926543338096776 0.10307381133257144 0.044935851271229885 5.129665697688534e-08 7.289910937106499 0.19613410048307733 DREDS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 2 DREDSPER 8 1 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 DREDS(1)PER;DREDS(1)PER 97.163 0.0079505 744780000.0 1119350.0 881870.0 750800.0 1005540.0 1000330.0 1107390.0 1121320.0 942460.0 1157670.0 1162900.0 True False 1057257.4241310968 839503.6414861443 799197.7693224743 1101106.2192733746 1079050.2799008715 1100478.3682445358 1234673.9686286012 939190.8262318184 947466.3104858205 1152597.6107225101 0.91728233192185 0.7283579574313869 0.6933883619813286 0.9553257867532295 0.9361899329502035 0.9547810597617817 1.071209897662933 0.8148471049172861 0.8220269603820345 1.0 20.13645750352948 -5.275365950583492 24.88847339165947 0.9350070993831738 0.7745443900500312 0.39177013790322834 0.08937398323228885 749.9898640192386 1340321.5358509321 0.026226209285686003 0.03911860049280125 5.304372922385768e-06 5.275365950583492 -0.16046270933314266 DREDS(ph)PERCS(ph)DS(ph)DEEK ddPTM_KYSE-520_SHP099_60min_R1 1 DREDSPERCSDSDEEK 16 2 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 3 DREDS(1)PERCS(1)DS(1)DEEK 98.281 0.00047381 402300000.0 1277800.0 1126400.0 941020.0 1099700.0 1084000.0 1156100.0 1095600.0 1246100.0 1285600.0 1154100.0 True False 1206917.8867688526 1072286.0532391316 1001679.6548852343 1204215.1573631398 1169304.6328836917 1148884.35106648 1206353.9400255883 1241777.5699419274 1052167.44733868 1143875.5718762123 1.0551129130148629 0.9374149423265873 0.875689349010448 1.0527501303205182 1.022230618113271 1.0043787797496646 1.0546198989518567 1.0855879786864702 0.9198268353723907 1.0 20.12549869696476 -5.292647383908288 24.95137170350476 1.02437500115741 0.954206598860633 0.1981699549498842 0.05833082163355015 929.6988243212443 743309.1877418152 0.016305465207225603 0.02418769874758116 5.097445792640514e-06 5.292647383908288 -0.07016840229677701 DREEALHQFR ddPTM_KYSE-520_SHP099_60min_R1 4 DREEALHQFR 10 1 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;A0A2R8Y7T2;O15523-2;A0A2R8YDH3;O15523;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A0D9SG12;A0A2R8Y5G6 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 0 ;;; 184.9 4.1893e-06 9188520000.0 4019540.0 3458980.0 2724360.0 2330170.0 4026930.0 3474460.0 2814780.0 3172110.0 3155970.0 2740240.0 False True 3796568.1034456617 3292805.4087651717 2899976.604730119 2551628.6562088463 4343826.480902515 3452774.6063544992 3099325.4320055 3161106.690786041 2582925.4035294494 2715963.605474461 1.397871494225132 1.2123893715394394 1.0677523803650204 0.9394929486778206 1.5993684422526264 1.2712889817061162 1.1411513121009103 1.1638987666897755 0.9510162059326378 1.0 21.37303271659706 -7.559544425412529 1.9032681842948433 0.9722575055939027 1.2330603717843895 0.25918667373644866 0.16985679773286444 0.5381433040743866 3.51979605884605 0.1582023901790662 0.05041653548960739 2.7571194030987904e-08 7.559544425412529 0.26080286619048687 DREEDEEDAYER ddPTM_KYSE-520_SHP099_60min_R1 2 DREEDEEDAYER 12 1 P49756 P49756 RBM25 RNA-binding protein 25 0 ; 148.52 2.3564e-05 110379000.0 145225.0 144416.0 108358.0 70589.0 130992.0 147449.0 104732.0 122107.0 126213.0 129185.0 False True 137169.07975113977 137478.0385871648 115342.93005893008 77297.75733664323 141300.32515747295 146528.71609757072 115319.33264581955 121683.43931698803 103295.90077081275 128040.52140440929 1.0712942922022195 1.0737072692241514 0.9008314617419081 0.603697614542683 1.1035594326516625 1.1443933099488672 0.9006471652953479 0.9503510137439792 0.8067438310763985 1.0 16.96624093136284 DREEDEEDAYERR ddPTM_KYSE-520_SHP099_60min_R1 2 DREEDEEDAYERR 13 2 P49756 P49756 RBM25 RNA-binding protein 25 0 ; 237.46 5.7357e-16 136708000.0 150615.0 174674.0 121645.0 84325.0 140939.0 160505.0 121441.0 113653.0 142064.0 125054.0 False True 142260.08570644105 166282.39884898055 129486.43133888155 92339.22264676428 152030.09746678476 159503.22875869335 133717.44142994477 113258.7642698095 116268.75874200568 123946.11885053969 1.147757485476292 1.3415700337458087 1.0446993624304013 0.7449948695699898 1.2265821542190452 1.2868755410649864 1.0788352444596334 0.913774189302228 0.9380588905910661 1.0 16.9193535711721 -1.0000000000000002 0.24512465898941477 0.9870616628708727 2.4133603369571865 0.1309969076759364 0.1626307174866503 116.280616139375 1.5676773245580027 0.23876410742728701 67.95925029298748 0.09999999999999995 1.0000000000000002 1.426298674086314 DREGFFTNGLTLGAK ddPTM_KYSE-520_SHP099_60min_R1 2 DREGFFTNGLTLGAK 15 1 C9J712;C9J0J7;C9JQ45;C9J2N0;G5E9Q6;P35080-2;P35080 C9J712 PFN2 Profilin;Profilin-2 0 ; 130.39 4.9118999999999995e-05 644600000.0 1169490.0 984290.0 697360.0 686590.0 1149750.0 1050250.0 733210.0 812010.0 780080.0 791490.0 False True 1104616.0583794827 937003.2309505885 742312.9414154505 751843.307169189 1240228.7838173676 1043695.0001795423 807330.0222400177 809193.3268345592 638437.1362165196 784478.0143699014 1.4080905240750674 1.1944289244398985 0.9462507907397275 0.9583994623138995 1.5809605382166494 1.3304324417783027 1.0291302081785825 1.0315054240041506 0.8138368756316481 1.0 19.58137348950274 -6.926870019700715 4.8700508983187705 0.9568008947083843 1.2237762860858206 0.33371062235796767 0.18702363213506779 0.2878649186216565 12.713813997487716 0.08916891840894722 0.05865251252325735 1.1833956820506495e-07 6.926870019700715 0.2669753913774363 DREGPTDHLESACPLNLPLQNNHTAADMY(ph)LSPVRS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 DREGPTDHLESACPLNLPLQNNHTAADMYLSPVRSPK 37 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 DREGPTDHLESACPLNLPLQNNHT(0.377)AADMY(0.521)LS(0.393)PVRS(0.709)PK 103.54 0.00019792 2262600000.0 699810.0 920920.0 774430.0 1270500.0 711040.0 805850.0 735300.0 641170.0 863620.0 646340.0 True False 660990.1442633519 876677.6208708993 824350.9969318099 1391247.938010246 766994.802735812 800820.3912351206 809631.2998364512 638945.9309202028 706808.3780885437 640613.9304449112 1.031807322398202 1.3684960304594689 1.286814035341523 2.1717416245444645 1.1972808680621858 1.250082699074222 1.263836550157684 0.9973962484338266 1.1033297037385057 1.0 19.28909564495852 -6.7672486243021694 1.3882849230648517 1.039771852186892 1.4358434925692922 0.23796900045232094 0.2842752252864356 0.6513433824365722 2.53759294036624 0.1816053771907125 0.10578511197510741 1.7090366480560243e-07 6.7672486243021694 0.3960716403824003 DREGPTDHLESACPLNLPLQNNHTAADMYLS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 DREGPTDHLESACPLNLPLQNNHTAADMYLSPVR 34 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 DREGPTDHLESACPLNLPLQNNHT(0.01)AADMYLS(0.99)PVR 100.41 0.00066255 965750000.0 62636.0 79879.0 78171.0 78495.0 66790.0 55913.0 61701.0 75332.0 81206.0 59678.0 True False 59161.456218229636 76041.49293917658 83210.02773802236 85955.1411996176 72045.99301688366 55564.02622712575 67938.33922373023 75070.69087462095 66461.03743667158 59149.29934878142 1.0002055285452587 1.2855856920770639 1.4067796010120723 1.4531895076689263 1.2180362880049556 0.9393860424192916 1.1485907689814399 1.2691729521926711 1.1236149568699971 1.0 15.852073458815692 -6.004465233270656 24.903721423935337 1.1120822274187412 1.300054513406271 0.2917592064143445 0.13910036038335188 255.10333961568267 1422788.0487157106 0.046054861613544794 0.05092310733383319 9.897710951922895e-07 6.004465233270656 0.1879722859875299 DREGPTDHLESACPLNLPLQNNHTAADMYLS(ph)PVRS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 DREGPTDHLESACPLNLPLQNNHTAADMYLSPVRSPK 37 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 DREGPTDHLESACPLNLPLQNNHT(0.037)AADMY(0.047)LS(0.916)PVRS(0.999)PK;DREGPTDHLESACPLNLPLQNNHT(0.001)AADMY(0.013)LS(0.987)PVRS(0.999)PK;DREGPTDHLESACPLNLPLQNNHT(0.001)AADMY(0.031)LS(0.968)PVRS(1)PK;DREGPTDHLESACPLNLPLQNNHT(0.007)AADMY(0.031)LS(0.962)PVRS(1)PK;DREGPTDHLESACPLNLPLQNNHT(0.001)AADMY(0.001)LS(0.998)PVRS(1)PK;DREGPTDHLESACPLNLPLQNNHT(0.003)AADMY(0.119)LS(0.925)PVRS(0.953)PK;DREGPTDHLESACPLNLPLQNNHT(0.02)AADMY(0.245)LS(0.796)PVRS(0.939)PK;DREGPTDHLES(0.002)ACPLNLPLQNNHT(0.335)AADMY(0.292)LS(0.694)PVRS(0.677)PK;DREGPTDHLESACPLNLPLQNNHTAADMY(0.034)LS(0.966)PVRS(1)PK 265.67 7.545999999999999e-42 24486530000.0 2623424.0 2829266.0 2560989.0 4396321.0 2575941.0 2638462.0 2181074.0 2245787.0 3260477.0 2312314.0 True False 2477897.4410539106 2693343.8145451564 2726074.4486672822 4814146.026037898 2778652.901600604 2621994.379970215 2401558.2451509396 2237996.8890676256 2668456.566736526 2291828.6969130677 1.0811878934893626 1.1751942098346624 1.1894756586035915 2.1005697469982003 1.2124173614473255 1.1440621122782244 1.0478785994719717 0.9765114173158099 1.1643350876663467 1.0 21.12806778298707 -6.14838435322616 4.06598440188954 1.0637394034345764 1.385225294508468 0.22901470432315074 0.2695897235761347 0.37916619239188604 10.806409059515406 0.09712083488322694 0.09724535681061221 7.105843638618005e-07 6.14838435322616 0.3214858910738916 DRELWVQR ddPTM_KYSE-520_SHP099_60min_R1 4 DRELWVQR 8 1 Q9Y3C8 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 0 ;;; 174.41 9.9905e-05 1586330000.0 1800320.0 1513590.0 1040200.0 931340.0 1591780.0 1375910.0 1230720.0 1145410.0 1134910.0 1172840.0 False True 1700452.660751055 1440874.8644550922 1107252.9563788453 1019854.2735824197 1717044.0300107058 1367322.4353220991 1355133.1882697106 1141436.8400507036 928838.9527529114 1162449.5500557134 1.4628184600953704 1.2395160412647883 0.9525169985448205 0.8773320730637648 1.4770912251016932 1.1762423885462958 1.1657565596758692 0.981923766064512 0.7990359260824648 1.0 20.148736674393177 -7.344783074864726 3.182695410765275 0.8969240837817494 1.1854719529733115 0.31204126458948955 0.18314161703478293 0.3498286878200962 6.792600914265699 0.12377500645242528 0.05296468701150834 4.5208169763609295e-08 7.344783074864726 0.28854786919156217 DRENYDR ddPTM_KYSE-520_SHP099_60min_R1 8 DRENYDR 7 1 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ;;;;;;; 154.49 0.0013223 2482084000.0 2000651.0 1802053.0 1486122.0 1247402.0 2073691.0 2034014.0 1502945.0 1650313.0 1690658.0 1857559.0 False True 1889670.9008311087 1715479.6689432994 1581919.8019992707 1365954.711034914 2236878.684012193 2021318.9641468178 1654877.347929684 1644588.4493889506 1383677.1252199137 1841102.4724190321 1.0263800788601747 0.9317676200224334 0.8592242016386952 0.7419221534367831 1.2149669654580113 1.0978850957117006 0.8988512984588706 0.8932628542006785 0.7515481326804665 1.0 20.81213849603184 -6.9816876346819665 24.794754814465854 0.8726546557715661 0.9733773315173425 0.10402417517175933 0.1327852231556601 537.7815782963778 728148.9630187098 0.059711373881672226 0.04024952384444195 1.0430673835020528e-07 6.9816876346819665 0.10072267574577642 DRETMGHR ddPTM_KYSE-520_SHP099_60min_R1 5 DRETMGHR 8 1 P31943;G8JLB6;E9PCY7;D6RBM0;E7EN40;D6R9T0;D6RFM3;D6RIT2;D6RIU0;D6RDU3;D6RJ04;D6RIH9;D6RAM1;E7EQJ0;H0YAQ2;D6RDL0;P55795 P31943;P55795 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 0 ;;;; 128.27 0.00091479 1265980000.0 1205997.0 1269346.0 612546.0 702756.0 1471764.0 1491506.0 942350.0 1121344.0 1004257.0 1090041.0 False True 1139097.9423145829 1208364.7128328094 652031.6952682525 769545.7189487045 1587583.4536083336 1482196.9578079414 1037611.9344497198 1117454.3193876569 821909.2440588063 1080384.0847790644 1.0543453558440055 1.1184584536710542 0.6035184194717115 0.712289018128284 1.469462088506228 1.371916690267653 0.9604102365705514 1.0343120887570028 0.7607565269039339 1.0 20.043112861988767 DRFFQGS(ph)QEFLASASASAER ddPTM_KYSE-520_SHP099_60min_R1 2 DRFFQGSQEFLASASASAER 20 1 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 DRFFQGS(1)QEFLASASASAER;DRFFQGS(1)QEFLASASASAER 183.58 5.3113e-13 287400000.0 294180.0 291680.0 263950.0 276380.0 264260.0 224596.0 211372.0 226938.0 343490.0 243130.0 True False 277861.24896670907 277667.25497939397 280964.63933493244 302647.0721033231 285055.7585662773 223194.21305434403 232739.54455192506 226150.80504572712 281120.8746782542 240976.05735227795 1.15306579425237 1.152260759970348 1.1659442121430181 1.2559217518481083 1.1829214972571325 0.926209082788922 0.965820202675521 0.9384783182634693 1.1665925559869599 1.0 17.878530286223715 -6.248022911610327 24.199500811039726 0.9934749403681575 1.1835816203570466 0.6449640960087492 0.06766329858017896 321.8894519121654 580597.2396114628 0.02259944244585018 0.022464586810299718 5.649071718216003e-07 6.248022911610327 0.19010667998888908 DRGDAYYDT(ph)DYRHSYEYQR ddPTM_KYSE-520_SHP099_60min_R1 2 DRGDAYYDTDYRHSYEYQR 19 2 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 DRGDAYYDT(0.622)DYRHS(0.378)YEYQR;DRGDAYYDT(0.715)DYRHS(0.285)YEYQR 141.37 2.2267e-06 3647400000.0 1043960.0 849300.0 941550.0 1081710.0 860370.0 846770.0 962400.0 960350.0 1152760.0 732930.0 True False 986049.4577173349 808498.3531747105 1002243.8195332654 1184515.3931720303 928076.2241643379 841484.9943366165 1059688.7841188652 957018.7699973747 943447.8427147915 726436.8104109109 1.3573781553822601 1.1129644610346512 1.3796710259855136 1.6305828341793502 1.2775732326110638 1.1583732848843773 1.4587487430867516 1.317415026719302 1.2987335294602262 1.0 19.47047778396506 -5.9493007787205565 24.99999197435384 1.2728808795252098 1.3651610840731032 0.10645840195452372 0.16096503718796867 329.63352731328087 162541.742398203 0.05167153325527505 0.058589999514310244 1.1238263775233738e-06 5.9493007787205565 0.09228020454789343 DRGDAYYDTDY(ph)RHSYEYQR ddPTM_KYSE-520_SHP099_60min_R1 1 DRGDAYYDTDYRHSYEYQR 19 2 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 DRGDAYYDT(0.24)DY(0.557)RHS(0.193)Y(0.009)EY(0.001)QR 65.949 0.014357 98765000.0 21475.0 15561.0 24750.0 17408.0 13877.0 22193.0 11164.0 22860.0 18289.0 14419.0 True False 20283.73894064884 14813.426202462806 26345.424601400162 19062.451086093948 14969.040950670662 22054.48525492464 12292.566070140268 22780.70399556412 14968.178628171383 14291.258877812257 1.4193108608605602 1.0365375317258603 1.8434642340922445 1.3338538787292669 1.0474263379211952 1.5432150130010658 0.860145783883669 1.5940306022258166 1.0473659987651662 1.0 13.802845384631427 -5.527805383142615 24.93719144053293 1.211601014394681 1.4259827862904269 0.13435383807612233 0.2836274575869001 292.61732781203204 1481131.505682154 0.07964299106286514 0.10318864242398361 2.966160293057798e-06 5.527805383142615 0.21438177189574592 DRGDAYYDTDYRHS(ph)YEYQR ddPTM_KYSE-520_SHP099_60min_R1 4 DRGDAYYDTDYRHSYEYQR 19 2 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 DRGDAYYDT(0.013)DYRHS(0.985)Y(0.001)EYQR;DRGDAYYDT(0.002)DYRHS(0.998)YEYQR;DRGDAYYDT(0.062)DYRHS(0.938)YEYQR;DRGDAYYDTDYRHS(1)YEYQR 172.49 3.9319e-09 3468230000.0 797900.0 661150.0 769940.0 882600.0 706060.0 712730.0 669420.0 790710.0 826600.0 603750.0 True False 753638.8964257843 629387.3615936176 819571.564347557 966482.0386366337 761622.9050681371 708281.5876962304 737091.506509612 787967.2115631013 676510.2768902868 598401.2447103922 1.2594206698057961 1.051781504729693 1.3696020380843366 1.6151069991580336 1.2727629024848355 1.1836231858759199 1.2317680035347212 1.316787387272988 1.1305295282560734 1.0 19.190753650557486 -6.005925163932526 24.944333231429674 1.1996147489222393 1.3248116611691292 0.17680763058053617 0.14991224564727046 600.7748418763523 2529216.521822109 0.0508453907636106 0.05584547337613882 9.864494524183822e-07 6.005925163932526 0.1251969122468899 DRGFGAPR ddPTM_KYSE-520_SHP099_60min_R1 3 DRGFGAPR 8 1 P17844-2;P17844;J3QR02;J3KRX8;J3QRQ7;X6RLV5;J3QKN9 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ;; 125.16 0.0047544 0.0 3689810.0 2768680.0 1860400.0 1261996.0 2714730.0 2703940.0 1998493.0 2473940.0 2336860.0 2020820.0 False True 3485128.883846123 2635668.4569265926 1980324.3607452456 1381935.7204070687 2928363.806299209 2687063.707484383 2200520.1758521 2465358.4795619366 1912545.1314466929 2002917.1069741682 1.740026520174442 1.3159148962027338 0.9887200792532779 0.6899615144307076 1.4620494258612253 1.3415750947096177 1.0986576369984942 1.2308839297330603 0.9548798224285969 1.0 20.933671284118365 -4.360688706460801 3.0249802170790128 1.1127130367215947 1.7781708621761871 0.47416387881119526 0.20596178974378151 0.28629066994116814 4.148447537797986 0.055835119633867655 0.39857843648327906 4.358241517306199e-05 4.360688706460801 0.6654578254545924 DRGQAGASRPHAPGT(ph)PAGR ddPTM_KYSE-520_SHP099_60min_R1 3 DRGQAGASRPHAPGTPAGR 19 2 Q8TDD1-2 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 DRGQAGASRPHAPGT(1)PAGR;DRGQAGASRPHAPGT(1)PAGR;DRGQAGASRPHAPGT(1)PAGR 123.32 1.9449e-05 766836000.0 201561.0 205091.0 231759.0 239794.0 206722.0 182043.0 196868.0 173170.0 237007.0 185901.0 True False 190380.009528108 195238.12051213288 246698.55596751106 262583.94966330484 222989.8453127146 180906.80211157803 216769.33868652608 172569.31368818178 193972.50326026636 184254.06176878963 1.0332472874709568 1.059613658650991 1.338904302023364 1.4251189208127586 1.2102302829694598 0.981833455256949 1.1764697972223706 0.9365834979786204 1.0527447883546355 1.0 17.491336897442913 -6.229621529649595 10.186698436235208 1.0347640603898565 1.2237239009945162 0.35670041272832365 0.1229933371001705 0.7982740909086998 251.99966694165107 0.04463336876730964 0.044367290315935 5.893570328191087e-07 6.229621529649595 0.18895984060465976 DRGQYQDHAIDRR ddPTM_KYSE-520_SHP099_60min_R1 2 DRGQYQDHAIDRR 13 2 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 0 ; 184.51 4.5771e-08 942890000.0 276800.0 366240.0 326890.0 231760.0 329760.0 318520.0 232010.0 241580.0 361070.0 195072.0 False True 261445.35221287998 348645.2806625528 347961.8524424929 253786.4007188151 355710.23592225695 316531.99853100517 255463.834999395 240742.01536519564 295508.78983398963 193343.81384371943 1.3522302421540484 1.8032399057999557 1.799705123866812 1.3126171232142532 1.8397807969681355 1.6371457262494018 1.3212930371068787 1.2451498218597692 1.5284108860749512 1.0 17.560809079665585 -7.917049352668934 0.46994829064697824 0.998706883753498 1.6575365139443698 0.4403833387682935 0.20046520849395638 0.9763855238812873 0.5577776523782693 0.24675434987344874 0.1291013790839128 1.2104605705448003e-08 7.917049352668934 0.6588296301908718 DRHDDYYR ddPTM_KYSE-520_SHP099_60min_R1 5 DRHDDYYR 8 1 F8WJN3;Q16630-3;Q16630;Q16630-2 F8WJN3 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 0 ;;;; 159.79 0.00025152 3548260000.0 542967.0 681461.0 630384.0 575873.0 759598.0 655590.0 608763.0 665265.0 708154.0 494554.0 False True 512847.53813212045 648722.5906661854 671019.5612900619 630603.7967774697 819374.041078586 651498.2196312371 670302.7049943388 662957.3509890189 579571.0847096113 490172.6363171899 1.0462590118968975 1.3234573752223862 1.3689453706180494 1.2864932679950887 1.6716029830526289 1.3291199291052502 1.3674829138372935 1.3524976750436561 1.1823815565554576 1.0 18.90293042304104 -7.998680980570321 2.563082794461053 1.0008644501460244 1.353769961487633 0.3661789312849538 0.14229039709861158 0.2927020360959161 4.513253414977797 0.13864852386480464 0.03769135390586991 1.0030417713026259e-08 7.998680980570321 0.35290551134160864 DRHS(ph)PPGCHLFPPPPPPPPPLPPPPPPPPPDKDDIR ddPTM_KYSE-520_SHP099_60min_R1 3 DRHSPPGCHLFPPPPPPPPPLPPPPPPPPPDKDDIR 36 2 Q12873-3 Q12873-3 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 DRHS(1)PPGCHLFPPPPPPPPPLPPPPPPPPPDKDDIR;DRHS(1)PPGCHLFPPPPPPPPPLPPPPPPPPPDKDDIR;DRHS(1)PPGCHLFPPPPPPPPPLPPPPPPPPPDKDDIR 141.07 7.6135e-07 6550010000.0 1398510.0 1321910.0 1250020.0 1456210.0 1333310.0 1315770.0 1322820.0 1337300.0 1417470.0 1142480.0 True False 1320931.862439434 1258403.4593726383 1330598.2893027165 1594607.7605744996 1438233.9115038328 1307557.791369901 1456543.5550790885 1332661.218428166 1160093.1795108586 1132358.5160359894 1.166531486038165 1.111311869475659 1.1750680287729884 1.408218102299165 1.2701223959869277 1.1547206762282551 1.2862918717456757 1.1768898273431718 1.0244928289778392 1.0 20.110899371503308 -7.7254786458228635 3.369303072566267 1.000753634186895 1.2249734345300514 0.5259708556803131 0.07957706995682332 0.20101374961846313 4.375618530864998 0.07629889989955034 0.022536464701917804 1.881574220590712e-08 7.7254786458228635 0.22421980034315636 DRKET(ph)MT(ph)MILK ddPTM_KYSE-520_SHP099_60min_R1 1 DRKETMTMILK 11 2 B4DG22;B1AXG1;B7ZB17;P51812 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 2 DRKET(1)MT(1)MILK 52.495 0.036352999999999996 58236000.0 451960.0 500950.0 415650.0 362670.0 421880.0 446340.0 362310.0 414500.0 571490.0 418820.0 True False 426888.8778400774 476883.61005872017 442443.4640635145 397138.0477592882 455079.55583115557 443554.22649858356 398935.83060484787 413062.19624502724 467721.8220905278 415109.58063702955 1.0283763559129888 1.1488137887034355 1.065847392354901 0.9567065331275609 1.096287768479802 1.0685232217909852 0.9610373964210575 0.995067845967659 1.1267430189704588 1.0 18.663132703844067 -5.0050886514972 24.954829748010212 1.0290987494360462 1.0932789571979458 0.14587579183907007 0.05897231740678633 381.9050671303189 1872901.1065605888 0.015346067913143241 0.030611433117526624 9.883513242646672e-06 5.0050886514972 0.06418020776189959 DRLDFHQGWK ddPTM_KYSE-520_SHP099_60min_R1 2 DRLDFHQGWK 10 1 Q9H4L4;A0A087X0R7;J3QL36;J3QRE4;A0A087WV50 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 0 ; 120.86 0.00050477 774060000.0 740700.0 687260.0 518490.0 490950.0 755160.0 667260.0 571790.0 593410.0 612520.0 533540.0 False True 699611.8944511565 654242.9980017083 551912.6950133322 537609.7403905008 814586.7957273521 663095.3828324706 629592.113332632 591351.5992129359 501301.8083726576 528813.2506878383 1.3229848033141318 1.2371910067509104 1.0436816670071107 1.016634397287172 1.5404054165961278 1.2539311032202176 1.1905755245612861 1.11826168963004 0.9479751267968493 1.0 19.012398801929397 -7.507744453744189 2.308550576920771 0.9729906608917676 1.2285795235093004 0.35254138384489175 0.13769966261070993 0.3894593387928429 3.8482965216154685 0.12142321910318586 0.04078605422741871 3.106386901323395e-08 7.507744453744189 0.2555888626175329 DRLDYEDKFR ddPTM_KYSE-520_SHP099_60min_R1 4 DRLDYEDKFR 10 2 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;A0A0A0MTP2;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 0 ;;; 218.15 2.3920999999999996e-09 8731120000.0 4912310.0 4903840.0 3668450.0 3153140.0 4757720.0 4528540.0 3721600.0 3992250.0 4565560.0 3769750.0 False True 4639814.371852787 4668252.165586099 3904924.1567275305 3452813.47757389 5132125.496276198 4500275.702083375 4097815.6473158402 3978401.8165481575 3736569.3924016654 3736352.947821123 1.2418030193208924 1.2494141294409615 1.045116511009676 0.9241133066905306 1.3735654976784322 1.2044567964886022 1.0967421184622042 1.0647821209899848 1.0000579293721885 1.0 21.833199312385755 -7.254658614014892 2.0176625452296943 1.0075738586789493 1.1667770399612156 0.2604262024488828 0.11517619686023814 0.5586003516293265 4.259350229262483 0.08837812044922647 0.03634211283797989 5.563414088791511e-08 7.254658614014892 0.1592031812822663 DRLGS(ph)PLAVDEALR ddPTM_KYSE-520_SHP099_60min_R1 2 DRLGSPLAVDEALR 14 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 DRLGS(1)PLAVDEALR;DRLGS(1)PLAVDEALR 163.45 2.4129e-08 629870000.0 186283.0 149028.0 157722.0 141444.0 146960.0 191568.0 161232.0 159282.0 199768.0 174936.0 True False 175949.51064404595 141868.47118441144 167889.01248412242 154886.79523331087 158524.91591198102 190372.3530534584 177530.9040326816 158729.48791869817 163495.16694146994 173386.20313814838 1.01478380320639 0.8182223765023295 0.9682951091001977 0.8933051905514201 0.9142879481920116 1.097967136991725 1.0239044446416008 0.9154678114280395 0.9429537297797703 1.0 17.403629577978744 DRLGS(ph)YSGPTSVSR ddPTM_KYSE-520_SHP099_60min_R1 6 DRLGSYSGPTSVSR 14 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 DRLGS(1)YSGPTSVSR;DRLGS(0.987)YS(0.013)GPTSVSR;DRLGS(0.873)YS(0.127)GPTSVSR;DRLGS(0.999)YS(0.001)GPTSVSR;DRLGS(0.705)YS(0.194)GPT(0.064)S(0.027)VS(0.011)R;DRLGS(0.985)YS(0.012)GPT(0.001)S(0.001)VS(0.001)R 245.78 8.7525e-19 14475760000.0 2892800.0 2324340.0 2367640.0 2164600.0 2284130.0 2273210.0 2303380.0 2266410.0 3007030.0 2411220.0 True False 2732330.6173461666 2212675.2174945306 2520261.8627579445 2370322.933189277 2463878.0360780675 2259022.053185564 2536228.1292224745 2258548.3526940728 2461029.1530575864 2389858.466700775 1.1433022730915852 0.9258603588141151 1.054565321701746 0.9918256525297638 1.0309723652712695 0.9452534887156593 1.0612461635536787 0.945055275935241 1.0297802934142217 1.0 21.188493750109657 -4.241419376568012 24.51023574824715 0.9994560965275434 1.1433024500793108 0.484313459039556 0.0448777204852793 2982.0336795804833 3650796.606574364 0.010055408065796873 0.3841663742218356 5.735623341013639e-05 4.241419376568012 0.14384635355176734 DRLS(ph)PWAAR ddPTM_KYSE-520_SHP099_60min_R1 1 DRLSPWAAR 9 1 Q6ZU80;G3V3U2;G3V3F4;Q86TS1;Q6ZU80-3;Q6ZU80-1 Q6ZU80 CEP128 Centrosomal protein of 128 kDa 1 DRLS(1)PWAAR 125.53 0.00043458 162290000.0 44552.0 49842.0 42085.0 36566.0 50660.0 46235.0 43278.0 45486.0 54475.0 44624.0 True False 42080.61174778985 47447.51550563274 44797.866438380835 40041.2216460312 54646.65378402937 45946.430214997556 47652.96259257708 45328.21968251223 44583.71320299829 44228.666076946654 0.9514329840872946 1.0727774476192908 1.0128694896754045 0.9053228414433669 1.235548313597296 1.038838253341451 1.0774225591536724 1.0248606549348025 1.0080275341208333 1.0 15.432694111200576 -4.249633338633415 23.151712844010106 1.0444332295422634 0.9514328254960559 0.10429171904410661 0.07904347799893147 1504.034127585871 2949263.0941816303 0.019525353001627183 0.28457954682622144 5.628162930089585e-05 4.249633338633415 -0.09300040404620746 DRNS(ph)VGPSR ddPTM_KYSE-520_SHP099_60min_R1 1 DRNSVGPSR 9 1 Q9UDY4;C9JUL4 Q9UDY4 DNAJB4 DnaJ homolog subfamily B member 4 1 DRNS(1)VGPSR 67.275 0.029314 0.0 36563.0 30879.0 36326.0 29167.0 33801.0 34797.0 24691.0 29044.0 37910.0 33413.0 True False 34534.777503466525 29395.526489676064 38667.632083655015 31939.022910621672 36460.94639861778 34579.81901570822 27187.00724093814 28943.253142920563 31026.49963333028 33116.98681492063 1.042811584775796 0.8876268440108238 1.167607195055366 0.9644302209351898 1.100974149682922 1.0441716575533533 0.8209384323784319 0.8739700053230803 0.9368756827644569 1.0 15.015283793179911 -6.7429995936199765 24.940894391537935 0.8974435299530195 1.033795641330743 0.3613468459221105 0.08201285845145104 235.48718691039298 318510.17288476037 0.030337095046751073 0.02345460539498835 1.807175817028976e-07 6.7429995936199765 0.13635211137772352 DRNVIPDT(ph)PPSTPLVPSR ddPTM_KYSE-520_SHP099_60min_R1 3 DRNVIPDTPPSTPLVPSR 18 1 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 DRNVIPDT(0.996)PPS(0.002)T(0.002)PLVPSR;DRNVIPDT(0.999)PPSTPLVPSR;DRNVIPDT(0.992)PPS(0.004)T(0.004)PLVPSR 100.62 0.0018723 3422700000.0 901870.0 804910.0 704490.0 623950.0 689930.0 917400.0 797170.0 843800.0 1202160.0 950980.0 True False 851841.473266728 766240.9154054592 749902.5526238536 683250.0204025925 744223.5658352828 911674.1663077491 877755.7232294636 840873.0547444008 983878.0479874511 942555.057051244 0.9037577878280015 0.812940219961921 0.795606099626585 0.7248913634181968 0.7895810014149884 0.9672370430645136 0.931251407186225 0.8921208882747366 1.0438414611720241 1.0 19.846217366786156 -6.261852168303518 24.99975482887865 0.9579202986228568 0.8007648346721575 0.6765481368110928 0.05562823557708001 24.138613659610257 1461869.0845379836 0.019623905737502785 0.01836744020097049 5.472021961204424e-07 6.261852168303518 -0.15715546395069924 DRPDS(ph)LRVNGLPEEELSNMANALASATCER ddPTM_KYSE-520_SHP099_60min_R1 2 DRPDSLRVNGLPEEELSNMANALASATCER 30 2 F8WE10;P48059-5 F8WE10 LIMS1 1 DRPDS(1)LRVNGLPEEELSNMANALASATCER;DRPDS(1)LRVNGLPEEELSNMANALASATCER 253.11 7.467e-32 220489000.0 37404.0 53139.0 46223.0 42808.0 40551.0 26688.2 27044.0 43397.0 52512.0 43633.0 True False 35329.125556974584 50586.12267673487 49202.608539414905 46876.45944930551 43742.13299637141 26521.629044314865 29777.87144400516 43246.465935935965 42977.14451979529 43246.445565960305 0.8169255321362753 1.1697174649782478 1.1377260696343274 1.0839378551425374 1.0114619230303001 0.6132672569324471 0.6885622865487843 1.0000004710208064 0.9937728744492014 1.0 15.400293941776484 -6.020952888199977 23.878290545573115 0.8444500058484641 1.0642353040006731 0.273002749048856 0.15050355614022312 545.837499904182 622045.7962047011 0.05181131340440599 0.05241105520744439 9.528995279368461e-07 6.020952888199977 0.21978529815220904 DRPFFAGLVK ddPTM_KYSE-520_SHP099_60min_R1 4 DRPFFAGLVK 10 1 Q32Q12;P22392-2;J3KPD9;E7ERL0;P15531;P15531-2;E5RHP0 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ;;; 155.06 9.2749e-05 3898860000.0 1430210.0 1279740.0 1034190.0 906130.0 1484390.0 1281450.0 1019720.0 998650.0 1036000.0 964820.0 False True 1350873.4002470484 1218259.369471097 1100855.5421625068 992248.3227620824 1601203.0479762221 1273451.995220258 1122803.2491081536 995185.9162366632 847888.5154347172 956272.4454186022 1.4126449075458951 1.2739668232705499 1.1511944607800702 1.0376209494645974 1.6744214011889735 1.331683247092634 1.1741457724599118 1.0406928705354748 0.8866599884759404 1.0 19.867062180150718 -7.19128599517663 2.282805292798779 0.9525461924365357 1.3058982379205248 0.4737171704154529 0.15993813901402534 0.30742085601778496 3.069981780194138 0.10878284896001247 0.04949014358999053 6.437452015130785e-08 7.19128599517663 0.35335204548398913 DRPFFPGLVK ddPTM_KYSE-520_SHP099_60min_R1 4 DRPFFPGLVK 10 1 Q32Q12;P22392-2;J3KPD9;P22392;F6XY72;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 0 ;;; 139.86 0.00027057 22674930000.0 8511510.0 6609980.0 5163850.0 4724420.0 8503680.0 6404870.0 5629280.0 4743490.0 4853920.0 4558380.0 False True 8039359.573025469 6292426.6390177375 5496720.033452124 5173427.456351328 9172871.23667934 6364894.830564113 6198342.55887847 4727035.940328894 3972570.4853657233 4517996.29956598 1.7794081800814594 1.3927471874251462 1.2166278299033058 1.1450712026586456 2.0302963146650934 1.4087870835962293 1.3719228941099204 1.0462682186753882 0.8792770560142661 1.0 22.107251658426133 -7.244989383105872 2.349963990941009 0.9377869037692169 1.4836913684281368 0.4808591089318398 0.24367918087699444 0.29577321240750204 3.132374378968025 0.16858407277169907 0.07335743629988879 5.6886683736445054e-08 7.244989383105872 0.5459044646589198 DRPGS(ph)PES(ph)PLLDAPFSR ddPTM_KYSE-520_SHP099_60min_R1 8 DRPGSPESPLLDAPFSR 17 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 2 DRPGS(1)PES(1)PLLDAPFSR;DRPGS(0.999)PES(0.62)PLLDAPFS(0.381)R;DRPGS(1)PES(1)PLLDAPFSR;DRPGS(1)PES(1)PLLDAPFSR;DRPGS(1)PES(1)PLLDAPFSR;DRPGS(0.986)PES(0.951)PLLDAPFS(0.063)R;DRPGS(1)PES(1)PLLDAPFSR;DRPGS(1)PES(1)PLLDAPFSR 163.53 1.3508e-07 2435890000.0 1815170.0 1734162.0 1596824.0 1612368.0 1704570.0 1819480.0 1812590.0 2104090.0 2665460.0 2044000.0 True False 1714478.9016483151 1650850.2544897718 1699757.830048734 1765606.9699438822 1838709.96132339 1808123.950418161 1995824.2863736628 2096791.402888298 2181479.6547785928 2025891.7502079392 0.8462835694317525 0.8148758463132727 0.839017104380957 0.871520884451333 0.9076052366246437 0.8925076822256538 0.9851584055114543 1.0349967626222287 1.076799712795456 1.0 20.950125657771974 -6.663160849145362 0.9782766658919592 1.0509961877241205 0.83902061464306 0.902985001551248 0.026845636921690216 0.15555602468592045 0.2994874460305833 0.0194759733545575 0.012120516359277144 2.1718966270387108e-07 6.663160849145362 -0.21197557308106052 DRPGS(ph)PESPLLDAPFSR ddPTM_KYSE-520_SHP099_60min_R1 12 DRPGSPESPLLDAPFSR 17 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 DRPGS(1)PESPLLDAPFSR;DRPGS(0.898)PES(0.102)PLLDAPFSR;DRPGS(1)PESPLLDAPFSR;DRPGS(1)PESPLLDAPFSR;DRPGS(0.999)PES(0.001)PLLDAPFSR;DRPGS(1)PESPLLDAPFSR;DRPGS(0.999)PES(0.001)PLLDAPFSR;DRPGS(1)PESPLLDAPFSR;DRPGS(1)PESPLLDAPFSR;DRPGS(0.995)PES(0.005)PLLDAPFSR;DRPGS(0.993)PES(0.007)PLLDAPFSR;DRPGS(0.999)PES(0.001)PLLDAPFSR 231.29 1.9401e-19 20562520000.0 4656403.0 4153743.0 3966677.0 3436702.0 3849003.0 3831086.0 3362824.0 3376425.0 4281717.0 3395045.0 True False 4398103.043280749 3954190.951384642 4222375.346327601 3763325.124797866 4151897.63826866 3807174.771204809 3702771.0679195044 3364712.9697385207 3504265.126101927 3364967.542605038 1.3070268843888742 1.1751052280056908 1.254804182467326 1.1183837814626985 1.2338596392684396 1.1314150056429462 1.1003883458123793 0.9999243461152912 1.0413964122188977 1.0 21.68216115845439 -6.71064631474715 0.6852367310288277 0.9900855552838054 1.2364826412984742 0.775752091011896 0.04783347766992977 0.3267885514471975 0.30875088849181676 0.03911569030769851 0.02698183636928306 1.946945009467236e-07 6.71064631474715 0.2463970860146688 DRPHAS(ph)GT(ph)DGDES(ph)EEDPPEHKPSK ddPTM_KYSE-520_SHP099_60min_R1 2 DRPHASGTDGDESEEDPPEHKPSK 24 2 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 3 DRPHAS(1)GT(1)DGDES(1)EEDPPEHKPSK;DRPHAS(1)GT(1)DGDES(1)EEDPPEHKPSK 108.72 0.0011645 1444900000.0 917230.0 859320.0 812430.0 959530.0 823660.0 837960.0 777670.0 856080.0 991620.0 779030.0 True False 866349.4234473263 818036.9773343842 864800.5377339604 1050723.442706785 888477.3560156667 832729.9808145214 856284.4729278033 853110.4582905751 811566.8047059608 772128.400276168 1.1220276616395124 1.059457179714923 1.1200216666355574 1.3608143960654362 1.1506860202239473 1.0784864026717291 1.1089923290239487 1.1048815948039759 1.0510775208057193 1.0 19.558481253327155 -6.230990033707318 5.446009845416107 1.0775164682035878 1.1661429056435055 0.25962160318249883 0.07869093517174047 0.32711704425005755 28.789131356768333 0.028919631873325302 0.028168051254475735 5.875028345293446e-07 6.230990033707318 0.08862643743991772 DRPMEESLLLFEAMR ddPTM_KYSE-520_SHP099_60min_R1 1 DRPMEESLLLFEAMR 15 1 P47897;A0A1B0GVU9;P47897-2;B4DDN1;A0A0U1RQQ5;A0A1B0GTT3 P47897 QARS Glutamine--tRNA ligase 0 164.8 4.926e-08 80874000.0 49342.0 35731.0 29408.0 32190.0 45913.0 36250.0 30370.0 28610.0 26430.0 31856.0 False True 46604.90089916158 34014.42912667556 31303.686734463674 35249.32792172358 49526.09189076475 36023.75030374525 33440.09598263707 28510.758587624205 21630.978246080685 31573.78062359296 1.4760633658275586 1.0772998499032729 0.991445627232633 1.1164113775904345 1.5685828846786005 1.1409387660351047 1.059109657512776 0.9029884297834145 0.6850930683263604 1.0 14.946439397892766 -7.066875454324721 2.133388525662772 0.8369135137027996 1.2212929863716873 0.45434130495379466 0.18061458364605318 0.32047275690552757 2.8413832436926154 0.11343013253271789 0.05671566288559868 8.572836592308363e-08 7.066875454324721 0.3843794726688876 DRPPCS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 3 DRPPCSPSR 9 1 B1ALY4;X6R242;O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4 B1ALY4 PTBP3 Polypyrimidine tract-binding protein 3 1 DRPPCS(0.975)PS(0.025)R;DRPPCS(0.984)PS(0.016)R;DRPPCS(0.828)PS(0.172)R 69.45100000000001 0.015790000000000002 919810000.0 179454.0 166278.0 151854.0 120581.0 151501.0 160690.0 155860.0 134031.0 180823.0 159684.0 True False 169499.32888732012 158289.75529163348 161642.75181499054 132040.9819860003 163423.26677722536 159687.07410507117 171615.84984701374 133566.07774407056 147990.10137688418 158269.32399227226 1.070955031662334 1.0001290919733898 1.0213144767262858 0.8342803182279808 1.0325643823764912 1.0089578326174446 1.0843279387191491 0.8439163975363421 0.9350523376476292 1.0 17.272022131599577 -7.265142273168447 24.992750056909472 0.9171132833835965 1.0021089728398385 0.1998901565844614 0.07318689431395994 519.2388239536041 3504572.574095883 0.03843311517466652 0.019626581750430874 5.4307239396252625e-08 7.265142273168447 0.08499568945624192 DRPPCSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 DRPPCSPSR 9 1 B1ALY4;X6R242;O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4 B1ALY4 PTBP3 Polypyrimidine tract-binding protein 3 1 DRPPCS(0.379)PS(0.621)R 66.267 0.018362 465890000.0 39262.0 38699.0 35206.0 29671.0 45406.0 36459.0 34821.0 36959.0 32774.0 35942.0 True False 37084.05859314342 36839.84195161673 37475.435091591666 32490.922919088578 48979.1938752001 36231.44585722066 38341.04650021088 36830.79785529545 26823.067765306394 35623.581842452855 1.040997470640364 1.0341419937653336 1.051983914961969 0.912062213810542 1.3749092972125356 1.0170635288011214 1.076282746349768 1.033888114288495 0.7529581916813646 1.0 15.120544961866207 -7.603779216030501 7.560531213321121 0.878093541012714 1.0722702370385793 0.27982463453270157 0.12398926842786916 0.29782292401383065 23.67853448262641 0.08268758202640888 0.030808789696679294 2.4901229099960617e-08 7.603779216030501 0.1941766960258653 DRPS(ph)ESDELQTIQEDSAATSESLDVMASQK ddPTM_KYSE-520_SHP099_60min_R1 1 DRPSESDELQTIQEDSAATSESLDVMASQK 30 1 J3KS94;J3QQK6;P02686-2;P02686 J3KS94 MBP Myelin basic protein 1 DRPS(0.799)ES(0.19)DELQT(0.011)IQEDSAATSESLDVMASQK 124.82 1.9942e-07 36506000.0 43170.0 43102.0 48743.0 41658.0 41079.0 51562.0 52649.0 68277.0 79786.0 67175.0 True False 40775.27404273854 41031.31522257903 51885.051771557504 45617.16379506558 44311.683592462374 51240.18243204724 57971.27472472371 68040.1630229716 65298.87364138458 66579.88176135918 0.6124263510843782 0.6162719749134833 0.7792902360134547 0.6851493662690809 0.6655416384079469 0.7696045873993335 0.8707025784832254 1.0219327704252534 0.9807598318578262 1.0 16.022798687960154 -6.829825970497075 1.5701355313481362 1.0075153847545728 0.6736024274123042 0.9062088680998877 0.046292829416438225 0.11589816060354059 0.57721128559957 0.029179321059116702 0.016526011564773364 1.4797012119070717e-07 6.829825970497075 -0.33391295734226856 DRPSES(ph)DELQTIQEDSAATSESLDVMASQK ddPTM_KYSE-520_SHP099_60min_R1 1 DRPSESDELQTIQEDSAATSESLDVMASQK 30 1 J3KS94;J3QQK6;P02686-2;P02686 J3KS94 MBP Myelin basic protein 1 DRPS(0.121)ES(0.721)DELQT(0.158)IQEDSAATSESLDVMASQK 94.60600000000001 0.000297 25265000.0 46361.0 45293.0 40263.0 37865.0 39883.0 41385.0 40826.0 57003.0 65895.0 53672.0 True False 43789.26291163779 43117.05629382094 42858.417403077736 41463.67821547265 43021.56519677149 41126.70086401371 44953.09050336317 56805.269897600236 53930.12907777102 53196.507836184166 0.8231604797533798 0.8105241875387316 0.8056622351049427 0.7794436120347948 0.8087291242736107 0.7731090354776897 0.8450383743570882 1.0678383263903162 1.0137907782188635 1.0 15.699043920524351 -7.16576642282591 4.439221614607046 1.0302245904759382 0.8011122265524074 0.9533335490557582 0.022499462728807453 0.04031095939295238 1.3547046785382566 0.010852495332669135 0.006008955778500241 6.827057759668314e-08 7.16576642282591 -0.22911236392353074 DRPSLTVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 DRPSLTVTPK 10 1 Q8TF76-2;Q8TF76 Q8TF76-2 GSG2 Serine/threonine-protein kinase haspin 1 DRPSLT(0.001)VT(0.999)PK;DRPSLTVT(1)PK;DRPSLTVT(1)PK;DRPSLTVT(1)PK 120.53 0.0014035 1908330000.0 2723550.0 2572480.0 2268500.0 1906870.0 2170880.0 2263320.0 2221990.0 2172290.0 2719000.0 2664340.0 True False 2572469.2522376776 2448894.1994288 2414731.1397283347 2088098.3514786297 2341715.9053824274 2249193.780344074 2446610.433732621 2164754.833006298 2225298.1404121625 2640736.020425155 0.9741485829482924 0.9273528972557171 0.9144159511027408 0.7907258943445808 0.8867663739465387 0.8517298824825198 0.9264880756004987 0.8197543473723571 0.8426810265018055 1.0 21.332508659902178 -4.789359254822443 2.4619243584712014 0.8680166402643561 0.9607404327460606 0.22425401104312248 0.05632187650026096 0.37676178358624046 4.4931760662359475 0.014617746907658321 0.0463067772602346 1.6242046337790868e-05 4.789359254822443 0.09272379248170448 DRPVGGS(ph)PGGPR ddPTM_KYSE-520_SHP099_60min_R1 6 DRPVGGSPGGPR 12 1 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 DRPVGGS(1)PGGPR;DRPVGGS(1)PGGPR;DRPVGGS(1)PGGPR;DRPVGGS(1)PGGPR;DRPVGGS(1)PGGPR;DRPVGGS(1)PGGPR 140.8 2.2811e-05 4138230000.0 1338458.0 1194410.0 1147913.0 1114411.0 1161326.0 1138568.0 1118452.0 1136903.0 1535465.0 1160632.0 True False 1264211.066590127 1137028.7507540383 1221909.3087057392 1220324.2863801168 1252715.7491589368 1131461.7747816434 1231516.0431996179 1132959.3488481545 1256663.2619227506 1150349.7034380322 1.0989797822451723 0.9884200842194494 1.062206827240306 1.0608289659509214 1.0889868927813557 0.9835807071537127 1.0705579699103718 0.9848825495952201 1.0924184690681285 1.0 20.13364107286108 DRPVS(ph)QPSLVGSK ddPTM_KYSE-520_SHP099_60min_R1 1 DRPVSQPSLVGSK 13 1 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;F6UYG0 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 1 DRPVS(1)QPSLVGSK 106.75 0.00034879 1288500000.0 595500.0 385500.0 353840.0 367650.0 358230.0 497060.0 401720.0 449180.0 502160.0 428590.0 True False 562466.4279001807 366980.00135270326 376649.09256401693 402591.3454619969 386420.66295011586 493957.66416495433 442329.77800938283 447621.89941940014 410980.40242345334 424793.0260379743 1.3240952497414566 0.8639030748115369 0.8866649626454707 0.9477352988040989 0.9096680954351917 1.1628196177608554 1.0412830505598762 1.053741168009159 0.9674838738682914 1.0 18.696400555590603 -6.232150727016572 24.964150671669177 1.0481880278619697 0.9719168677458049 0.042381856676639296 0.13018383832789523 2034.075134034386 1733742.1477638492 0.04256652704173111 0.0425593664711982 5.859347736551031e-07 6.232150727016572 -0.07627116011616486 DRPYDYK ddPTM_KYSE-520_SHP099_60min_R1 2 DRPYDYK 7 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 0 ; 120.15 0.0027715 1314390000.0 2306300.0 2159000.0 1598500.0 1384580.0 2030600.0 2175200.0 1629990.0 1804690.0 1804650.0 1856460.0 False True 2178364.9415049306 2055278.3992749301 1701541.8676904282 1516170.0669108445 2190396.6674664435 2161623.7699505268 1794765.2963693968 1798429.9516078108 1476971.0515243865 1840013.2087040246 1.1838854912564551 1.1169911115597497 0.9247443766389449 0.8239995559481488 1.1904244258165975 1.1747870937693008 0.9754089198269956 0.9774005659853376 0.8026958961694958 1.0 20.811284692162655 -7.217086967668107 2.5912325086676806 0.9080540952234835 1.0583507412680733 0.21151188075406668 0.12178294388441922 0.5085836706074647 6.635655612066312 0.08107200494825748 0.037474846068165445 6.066148425260654e-08 7.217086967668107 0.1502966460445898 DRRDS(ph)GVGASLTRPNR ddPTM_KYSE-520_SHP099_60min_R1 3 DRRDSGVGASLTRPNR 16 3 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 DRRDS(0.996)GVGAS(0.004)LT(0.001)RPNR;DRRDS(0.994)GVGAS(0.005)LT(0.001)RPNR;DRRDS(1)GVGASLTRPNR 89.831 0.0027029 4749320000.0 368431.0 318037.0 360850.0 353502.0 296723.0 357642.0 254921.0 260175.0 388596.0 277347.0 True False 347993.3979810101 302758.02513673087 384110.9683804137 387098.72379574855 320073.4119770736 355409.8236174359 280690.9024692073 259272.5136503015 318036.76210798224 274889.92135270097 1.2659372750684184 1.101379139864038 1.3973264879637959 1.4081954037851998 1.164369397037294 1.2929168951284424 1.0211029239921217 0.9431866849626641 1.1569604318083426 1.0 18.068494486849588 -6.76391524374441 24.999545478808095 1.0255780157056853 1.2709838440750898 0.5825039931099473 0.10007614263659943 48.57864803837291 490502.38618403295 0.04171969591011123 0.029618446599657185 1.7222046450506106e-07 6.76391524374441 0.2454058283694045 DRRPVHLDQAAFR ddPTM_KYSE-520_SHP099_60min_R1 2 DRRPVHLDQAAFR 13 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 0 ; 192.65 1.3951e-08 759670000.0 647450.0 544410.0 482380.0 494840.0 605950.0 587900.0 547710.0 564600.0 539630.0 423980.0 False True 611534.6578404234 518255.72642393084 513474.98663528886 541869.4448209289 653634.817616119 584230.6980295678 603077.8719344799 562641.5343786307 441646.7949652863 420223.8670514491 1.4552592220221314 1.23328484424346 1.2219081944063468 1.2894780313717555 1.5554442973513756 1.3902844265579017 1.4351347441687399 1.3389090399040686 1.0509797981351077 1.0 18.680798578139637 -7.778471872734426 4.1573138006295425 1.0049930826460576 1.3647758684635833 0.665445564967018 0.09676330467323317 0.13257427055480117 4.90465818483449 0.09518141881898942 0.02701933513491143 1.665436687002756e-08 7.778471872734426 0.35978278581752576 DRS(ph)PAAETPPLQR ddPTM_KYSE-520_SHP099_60min_R1 3 DRSPAAETPPLQR 13 1 K7EKX9;K7EN83;B4DKV7;Q8TE68-3;Q8TE68-2;Q8TE68 K7EKX9 EPS8L1 Epidermal growth factor receptor kinase substrate 8-like protein 1 1 DRS(0.988)PAAET(0.012)PPLQR;DRS(0.999)PAAET(0.001)PPLQR;DRS(1)PAAETPPLQR 176.43 2.7166000000000004e-06 2773300000.0 3330470.0 2909460.0 2875120.0 2648890.0 2825110.0 2901230.0 2927430.0 2907900.0 3492550.0 2579000.0 True False 3145722.1899726526 2769685.174411505 3060454.8355546496 2900639.7091821805 3047430.0843229205 2883122.347413378 3223363.193363557 2897813.1736089587 2858390.960020778 2556152.066431641 1.2306475155697778 1.0835369345916708 1.197289815322689 1.1347680551851675 1.1921943629031029 1.127915034976062 1.2610216879089415 1.1336622776336904 1.1182397939302018 1.0 21.285542234623566 -8.129922252364942 1.859769136143233 1.0007665090507958 1.1701065631690972 0.5239505104746975 0.049618062261722454 0.4049385008966912 2.86756066863413 0.04444150961700624 0.01251144553621472 7.414429629442962e-09 8.129922252364942 0.16934005411830144 DRS(ph)PHRS(ph)SPSDTRPK ddPTM_KYSE-520_SHP099_60min_R1 6 DRSPHRSSPSDTRPK 15 3 Q5JRC6;A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q8IWS0-4;Q8IWS0-2 Q5JRC6 PHF6 PHD finger protein 6 2 DRS(0.98)PHRS(0.559)S(0.456)PS(0.005)DTRPK;DRS(1)PHRS(0.547)S(0.452)PSDTRPK;DRS(0.997)PHRS(0.54)S(0.463)PS(0.001)DTRPK;DRS(1)PHRS(0.892)S(0.105)PS(0.003)DTRPK;DRS(0.995)PHRS(0.648)S(0.353)PS(0.004)DTRPK;DRS(0.947)PHRS(0.651)S(0.401)PS(0.001)DTRPK 115.98 0.00017328 3437780000.0 1070736.0 944409.0 1007478.0 1047760.0 933208.0 911982.0 900846.0 960542.0 1094470.0 761741.0 True False 1011340.1396207024 899038.1740531912 1072421.6439017945 1147338.7953794685 1006646.1603728088 906289.9820554542 991912.3050897153 957210.103994189 895741.8373434703 754992.5673655311 1.3395365508691957 1.190790761279005 1.420440002004125 1.5196689940710133 1.3333192986063387 1.2003958995488655 1.3138040663776218 1.2678404336274132 1.1864247094101459 1.0 19.526102916122646 -8.166876649042987 0.5937462769666533 0.9937922528282699 1.351751813816032 0.5876854986243831 0.08762418167895103 0.8336982286615388 0.656057239576063 0.10631124171915197 0.04360069035160889 6.8096274240426065e-09 8.166876649042987 0.35795956098776216 DRS(ph)PHRSS(ph)PSDTRPK ddPTM_KYSE-520_SHP099_60min_R1 1 DRSPHRSSPSDTRPK 15 3 Q5JRC6;A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q8IWS0-4;Q8IWS0-2 Q5JRC6 PHF6 PHD finger protein 6 2 DRS(0.998)PHRS(0.186)S(0.812)PS(0.004)DTRPK 85.23100000000001 0.0030909 409970000.0 75397.0 63481.0 68475.0 72879.0 71555.0 65456.0 62697.0 73252.0 79916.0 53610.0 True False 71214.57810980672 60431.27747307641 72889.00806387367 79805.39824812963 77185.97140774221 65047.464824329654 69035.02462375365 72997.90590914538 65405.26891841783 53135.05710794885 1.3402559813783135 1.1373146235696068 1.3717686971859806 1.5019349294383457 1.4526374037941028 1.2241911153342628 1.2992368575703706 1.3738181509966818 1.230924976433937 1.0 15.697376406822272 -8.093731182632412 3.546443811668423 1.0001222111814239 1.3358520067062658 0.5195406204648165 0.09871524963088643 0.34723499602228985 9.820970261585805 0.10328379025779472 0.027289577236502636 8.058771045237596e-09 8.093731182632412 0.33572979552484195 DRS(ph)PIRGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 DRSPIRGSPR 10 2 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 2 DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR;DRS(1)PIRGS(1)PR 87.824 0.008874600000000002 30658940000.0 5708280.0 4977800.0 5060480.0 4905300.0 4931370.0 4833860.0 4892090.0 4985730.0 5817120.0 4996030.0 True False 5391630.32922594 4738659.016169869 5386686.637854278 5371498.237167779 5319440.763342856 4803690.086710673 5386630.199397393 4968435.666308126 4760877.645661786 4951769.0610525245 1.08882911596849 0.9569628465594562 1.0878307472419382 1.0847634796655963 1.074250575452358 0.9700957430534176 1.0878193496068325 1.003365788074951 0.9614498549837129 1.0 22.239512601517024 -7.4863910034577605 8.056978503779364 0.981148257980496 1.047098958742046 0.2738266636862936 0.04691772247668383 0.3573636086953403 73.32160118695822 0.026095927887456336 0.012101761170844895 3.262939313510726e-08 7.4863910034577605 0.06595070076155007 DRS(ph)PLRR ddPTM_KYSE-520_SHP099_60min_R1 8 DRSPLRR 7 2 E9PB51;Q9BWF3;Q96PK6;Q96PK6-5;Q9BQ04 E9PB51;Q96PK6;Q9BQ04 RBM4;RBM14;RBM4B RNA-binding protein 4;RNA-binding protein 14;RNA-binding protein 4B 1 DRS(1)PLRR;DRS(1)PLRR;DRS(1)PLRR;DRS(1)PLRR;DRS(1)PLRR;DRS(1)PLRR;DRS(1)PLRR;DRS(1)PLRR 88.948 0.011856 699808180000.0 11277020.0 9530270.0 9082273.0 8132623.0 9079080.0 9526168.0 9989694.0 8758726.0 11196650.0 9532028.0 True False 10651461.22041796 9072421.523973085 9667730.8497306 8905545.044757735 9793551.943101166 9466711.651959397 10999549.759538133 8728344.023808027 9163620.604577338 9447581.647725575 1.127427273728003 0.9602903538978352 1.0233021751188596 0.9426269469607251 1.0366199846982938 1.0020248572541766 1.1642714685811877 0.9238707162598909 0.9699435206027992 1.0 23.171513650897243 DRS(ph)PLRRS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 DRSPLRRSPPR 11 3 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 2 DRS(1)PLRRS(1)PPR 87.51899999999999 0.007395399999999999 270120000.0 49467.0 48083.0 47500.0 33103.0 44098.0 35170.0 31877.0 26648.0 43305.0 35812.0 True False 46722.96689998029 45773.0205059456 50561.926002687185 36249.09916722012 47568.26171670208 34950.490984350916 35099.43824953971 26555.564307689947 35441.903630212786 35494.733541314396 1.316335192250329 1.289572168577282 1.4244909302906923 1.0212528888272305 1.3401498467747222 0.9846669490748535 0.9888632692138798 0.7481550545176053 0.9985116126864252 1.0 15.115317363111505 -6.3490535423682175 1.370596613203149 0.8984463527401713 1.2939891053106494 0.6402371365420989 0.12298134164828309 0.253191780223031 0.9602727388673925 0.057930664095146286 0.048633243262469344 4.4765811085946326e-07 6.3490535423682175 0.3955427525704781 DRS(ph)PPKS(ph)PEKLPQSSSSES(ph)SPPSPQPTK ddPTM_KYSE-520_SHP099_60min_R1 1 DRSPPKSPEKLPQSSSSESSPPSPQPTK 28 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 DRS(0.994)PPKS(0.469)PEKLPQS(0.189)S(0.184)S(0.178)S(0.172)ES(0.346)S(0.32)PPS(0.147)PQPTK 75.068 0.010418 4051500000.0 1197600.0 1138600.0 978720.0 1018500.0 1101100.0 1458800.0 1030900.0 1246300.0 1320600.0 1303900.0 True False 1131166.7406435881 1083899.946926558 1041809.8572073671 1115297.9337768094 1187750.3055980022 1449695.088085615 1135113.4326144385 1241976.8761886058 1080812.3296168814 1292348.4604188483 0.8752799846853833 0.8387056433489056 0.8061369585024444 0.8630009381644196 0.9190635049103196 1.1217524781325394 0.8783338761796101 0.9610232179841672 0.8363164910387959 1.0 20.30156369070026 -5.800331838374032 3.7672483424008005 0.9578577328220136 0.8406396609882729 0.35055436206363133 0.07268206987565569 0.25491814981439487 7.577321011834224 0.023146340469420882 0.02776776660244612 1.5836826601476884e-06 5.800331838374032 -0.11721807183374067 DRS(ph)PPKS(ph)PEKLPQSSSSESSPPS(ph)PQPTK ddPTM_KYSE-520_SHP099_60min_R1 2 DRSPPKSPEKLPQSSSSESSPPSPQPTK 28 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 DRS(0.872)PPKS(0.75)PEKLPQS(0.168)S(0.162)S(0.156)S(0.149)ES(0.26)S(0.244)PPS(0.238)PQPTK;DRS(1)PPKS(1)PEKLPQS(0.002)S(0.005)S(0.004)S(0.005)ES(0.094)S(0.332)PPS(0.558)PQPTK 188.49 1.5057e-15 4238700000.0 1580920.0 1492970.0 1394910.0 1478930.0 1535670.0 1640070.0 1654950.0 1623790.0 1854100.0 1609520.0 True False 1493223.2161141115 1421245.4802063436 1484828.1305349136 1619487.062543482 1656518.492232934 1629833.7147769218 1822248.4967555222 1618157.4514854348 1517442.1780574436 1595260.9049876132 0.936036990216159 0.8909172636042122 0.9307744745029296 1.0151863293835668 1.0383997295074416 1.0216721977459713 1.1422886946318487 1.0143528537722168 0.9512188089817359 1.0 20.60536096544564 -5.2663122918735255 3.0639752930807505 1.033774977140614 0.9123991311434725 0.530407842745496 0.04619290996120026 0.19785205917430787 3.79693801696348 0.013990661744079013 0.024340500122158864 5.4161128924701925e-06 5.2663122918735255 -0.12137584599714146 DRS(ph)PPKS(ph)PEKLPQSSSSESSPPSPQPTK ddPTM_KYSE-520_SHP099_60min_R1 1 DRSPPKSPEKLPQSSSSESSPPSPQPTK 28 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 DRS(0.985)PPKS(0.966)PEKLPQS(0.009)S(0.009)S(0.008)S(0.009)ES(0.009)S(0.003)PPS(0.002)PQPTK 78.786 0.031141000000000002 672130000.0 440620.0 453420.0 425760.0 453110.0 387540.0 429310.0 474860.0 441230.0 491250.0 396770.0 True False 416177.93024580623 431637.0226027046 453205.17084008624 496173.4381675105 418037.19319902745 426630.5170455418 522863.48298699525 439699.4761138561 402051.38340473437 393254.9264823891 1.0582904427122128 1.0976010560468703 1.152446264040336 1.2617094021064486 1.0630183248772298 1.084870114309038 1.3295789773415854 1.1181029060383478 1.0223683324225035 1.0 18.585105313484494 -7.7347017597248495 4.200002651751782 1.005670768662719 1.150879298170461 0.3036251726702869 0.08251319222913749 0.2540934769646406 9.56207656988841 0.07149234684121114 0.021873527503593553 1.8420365372096865e-08 7.7347017597248495 0.14520852950774188 DRS(ph)PPKSPEK ddPTM_KYSE-520_SHP099_60min_R1 1 DRSPPKSPEK 10 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DRS(1)PPKSPEK 76.58800000000001 0.011584 356420000.0 620000.0 521640.0 510300.0 576980.0 571940.0 530550.0 602490.0 584060.0 616680.0 565810.0 True False 585607.3640606414 496579.6314023969 543194.7545088683 631816.0057246368 616948.4241065481 527238.6406524695 663395.5689357589 582034.0321806292 504706.45723772363 560797.3635935192 1.0442405797133973 0.8854885269438089 0.9686114624864576 1.1266386875930354 1.1001271834682316 0.940158914574759 1.1829505842980488 1.037868702611275 0.8999800819383813 1.0 19.0971200414396 -5.033474706755549 23.09304203364929 1.0469049602131124 0.9554109292642474 0.13086471781190134 0.08702970795913048 407.04497706683077 280806.5475526583 0.023408352024928802 0.04059632174466127 9.25817303009382e-06 5.033474706755549 -0.09149403094886499 DRS(ph)PPKSPEKLPQSSSSESSPPSPQPTK ddPTM_KYSE-520_SHP099_60min_R1 1 DRSPPKSPEKLPQSSSSESSPPSPQPTK 28 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DRS(0.947)PPKS(0.052)PEKLPQSSSSESSPPSPQPTK 156.07 3.8103e-07 992410000.0 1019500.0 900870.0 933870.0 928630.0 808500.0 912980.0 882400.0 923030.0 1160500.0 865110.0 True False 962946.3026771357 857590.8529665618 994068.7544448302 1016886.7159972086 872124.3502642658 907281.7531672642 971601.6033941029 919828.2243668219 949782.4538243155 857445.7984453965 1.1230404352356946 1.0001691704845115 1.1593371339006382 1.1859486836845998 1.0171189267537173 1.0581214052389358 1.133134718434306 1.072753783428094 1.1076880375952989 1.0 19.709685951803326 -5.780097832450843 24.999253812485065 1.0715230534040725 1.11178523983286 0.15504489579899983 0.05805740257032794 621.9007198644792 833240.9310700499 0.018679501138959265 0.021217393252308855 1.6592130984777503e-06 5.780097832450843 0.04026218642878754 DRS(ph)PSRLDTFLK ddPTM_KYSE-520_SHP099_60min_R1 6 DRSPSRLDTFLK 12 2 Q66GS9 Q66GS9 CEP135 Centrosomal protein of 135 kDa 1 DRS(0.627)PS(0.372)RLDT(0.001)FLK;DRS(0.719)PS(0.098)RLDT(0.183)FLK;DRS(0.654)PS(0.303)RLDT(0.043)FLK;DRS(0.833)PS(0.116)RLDT(0.051)FLK;DRS(0.683)PS(0.307)RLDT(0.01)FLK;DRS(0.929)PS(0.071)RLDTFLK 162.59 2.1335e-06 7413710000.0 4645310.0 4681200.0 4643810.0 4062530.0 4159440.0 4408910.0 3804850.0 4030430.0 5559860.0 4093620.0 True False 4387625.394104099 4456308.125375552 4943157.4229587065 4448631.629755819 4486764.264023748 4381392.35728788 4189481.369757538 4016449.3790394324 4550329.576664936 4057353.711588171 1.0814007616769132 1.09832872412576 1.2183205543161297 1.0964367284642014 1.10583512874639 1.0798645296253628 1.0325649838691655 0.989918470151638 1.1215018211670285 1.0 21.952107648479195 -6.3710025958165675 1.6789988074114324 1.035104519776586 1.12720003448146 0.40458335088422304 0.048087534854090105 0.3779937093792392 2.117338885831263 0.02167286083720541 0.018190520282262822 4.255958693019509e-07 6.3710025958165675 0.09209551470487387 DRS(ph)SPPPGYIPDELHQVAR ddPTM_KYSE-520_SHP099_60min_R1 10 DRSSPPPGYIPDELHQVAR 19 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 DRS(0.496)S(0.496)PPPGY(0.008)IPDELHQVAR;DRS(0.634)S(0.366)PPPGYIPDELHQVAR;DRS(0.5)S(0.5)PPPGYIPDELHQVAR;DRS(0.5)S(0.5)PPPGYIPDELHQVAR;DRS(0.5)S(0.5)PPPGYIPDELHQVAR;DRS(0.499)S(0.499)PPPGY(0.001)IPDELHQVAR;DRS(0.5)S(0.5)PPPGYIPDELHQVAR;DRS(0.5)S(0.5)PPPGYIPDELHQVAR;DRS(0.5)S(0.5)PPPGYIPDELHQVAR;DRS(0.5)S(0.5)PPPGYIPDELHQVAR 216.87 7.6651000000000015e-19 14638400000.0 4699260.0 4451110.0 4324270.0 3900730.0 4256740.0 4171700.0 4087050.0 4220250.0 5164040.0 4206080.0 True False 4438582.680057443 4237271.994347682 4603019.363276631 4271454.206402759 4591721.220462475 4145662.872886452 4500208.899764135 4205610.937763752 4226380.510854732 4168817.40348072 1.0647102644388993 1.016420625861379 1.1041547081034007 1.024620124363409 1.1014445527474184 0.9944457796172759 1.0794929267006808 1.0088258925066644 1.0138080183905274 1.0 21.9912067520097 -7.28692766720978 22.418462872636834 1.0084876569995593 1.0537289475022238 0.2918720309090117 0.03384981296651591 276.0239945397239 242775.61072449866 0.017027020615815222 0.008188592564726732 5.165023868231098e-08 7.28692766720978 0.045241290502664455 DRS(ph)SSAPNVHINTIEPVNIDDLIR ddPTM_KYSE-520_SHP099_60min_R1 8 DRSSSAPNVHINTIEPVNIDDLIR 24 1 H7C560;A0A2U3TZI2;A0A2R8Y8E0;P15056;A0A2R8YDP5;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 DRS(0.376)S(0.376)S(0.249)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;DRS(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR 233.36 1.7523e-28 4363576000.0 857265.0 1112832.0 999326.0 1011945.0 769976.0 758238.0 574737.0 556393.0 991486.0 604586.0 True False 809710.8015345901 1059369.8803251125 1063744.1529381345 1108119.9485476424 830568.7306358421 753505.5553878956 632837.024852581 554463.0025461027 811457.1357280952 599229.8384007909 1.351252473834623 1.7678857300436364 1.7751855544727668 1.8492402706530173 1.3860603685097563 1.2574566670425353 1.0560839669491093 0.9252927124354141 1.3541667716242085 1.0 19.19274993842216 -6.14443519343152 2.1018979640180335 1.0907224249146592 1.6949097524477363 0.7101668819915503 0.17014629067438097 0.17164500972106064 1.4930791407614896 0.0646244444219699 0.064303480014883 7.170753714760584e-07 6.14443519343152 0.6041873275330771 DRSGS(ph)GPTQDLNTILLTSAQLSSDVAVETPK ddPTM_KYSE-520_SHP099_60min_R1 1 DRSGSGPTQDLNTILLTSAQLSSDVAVETPK 31 1 H0Y9P1;Q9NSY1 H0Y9P1 BMP2K BMP-2-inducible protein kinase 1 DRS(0.166)GS(0.736)GPT(0.056)QDLNT(0.043)ILLTSAQLSSDVAVETPK 209.69 2.1534e-22 83328000.0 22735.0 22050.0 19582.0 17018.0 16282.0 18141.0 14806.0 19484.0 26841.0 17333.0 True False 21473.84422890112 20990.68490227523 20844.287052307798 18635.38560335172 17563.3007680925 18027.775289937734 16302.73497263498 19416.414551599795 21967.351006547546 17179.44310486994 1.2499732440578253 1.2218489722943868 1.2133272845380516 1.0847491091296815 1.0223440108552615 1.0493806568635111 0.9489676046608032 1.1302121048438252 1.2786998316796634 1.0 14.06839564985211 -5.250839876074825 3.7449132038779016 1.0692891988500055 1.2318668243035422 0.4208546084268442 0.08360259920087539 0.23489713990320704 7.397145168428954 0.025143194008126136 0.042991057528369535 5.612548719783216e-06 5.250839876074825 0.1625776254535367 DRSS(ph)PPPGYIPDELHQVAR ddPTM_KYSE-520_SHP099_60min_R1 1 DRSSPPPGYIPDELHQVAR 19 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 DRS(0.418)S(0.582)PPPGYIPDELHQVAR 107.17 0.00011479 348740000.0 146300.0 144890.0 131890.0 147680.0 130950.0 133100.0 124000.0 142830.0 163730.0 136720.0 True False 138184.44735818036 137929.266915676 140391.84043146126 161715.46279838905 141255.01999642016 132269.27352906184 136535.13012337813 142334.55606677255 134000.75929741937 135508.76716655047 1.0197454397053238 1.01786231104996 1.0360351095136828 1.193394834738837 1.042405026257874 0.9760938446624118 1.007574144302901 1.0503715666738571 0.9888715106729762 1.0 17.048026668735766 -6.004988909800742 24.99017074808485 1.0080654259430593 1.0681756360162264 0.25756411763669607 0.049835194537896234 345.728984597308 1731819.3014455473 0.016770716280735776 0.01847638486431603 9.885783387971113e-07 6.004988909800742 0.06011021007316719 DRSVS(ph)VDSGEQR ddPTM_KYSE-520_SHP099_60min_R1 1 DRSVSVDSGEQR 12 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 DRS(0.034)VS(0.957)VDS(0.009)GEQR 89.50200000000001 0.0018662 21284000.0 18863.0 19340.0 18219.0 22186.0 21293.0 29881.0 28954.0 33047.0 44738.0 34613.0 True False 17816.631787541755 18410.87737006816 19393.425891430685 24294.550769535883 22968.637959402644 29694.501595205824 31880.952883808815 32932.36767022778 36614.70695320309 34306.355748506525 0.5193390961765846 0.5366608305771343 0.5653012530272892 0.7081647187370961 0.6695155302353136 0.8655685206814346 0.9293016465380968 0.9599494598507871 1.0672864008529106 1.0 15.066188260828483 -6.18532858320012 0.6904414262712119 1.0390680762833537 0.5085575323103847 0.9631415933769599 0.037597027678725366 0.12161355777286162 0.12810869228845947 0.026777380125431613 0.0297348279199094 6.526365869827412e-07 6.18532858320012 -0.530510543972969 DRSWVIGS(ph)PEILR ddPTM_KYSE-520_SHP099_60min_R1 2 DRSWVIGSPEILR 13 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 DRSWVIGS(1)PEILR;DRSWVIGS(1)PEILR 172.5 3.5520000000000006e-07 436890000.0 351990.0 378180.0 399640.0 280990.0 311790.0 294610.0 224880.0 217050.0 399980.0 278460.0 True False 332464.41302533104 360011.6651402469 425401.4338466085 307695.20511727623 336326.09915757086 292771.2297099692 247613.06501730045 216297.1042098507 327353.71467526874 275993.0610386016 1.2046114919491802 1.3044228857981834 1.541348294213491 1.1148657287229429 1.2186034601447129 1.0607919945821425 0.8971713422268547 0.7837048634334992 1.1860940033904823 1.0 18.074272469950973 -6.0891717820383136 1.3852833040176626 0.9514343523456725 1.3261876965167214 0.5455934479945281 0.13686482827777677 0.30483369354322337 1.1939664352081814 0.05973813939874645 0.062254580825302316 8.143820973627131e-07 6.0891717820383136 0.3747533441710489 DRT(ph)PPHLLYSDRDR ddPTM_KYSE-520_SHP099_60min_R1 4 DRTPPHLLYSDRDR 14 2 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 DRT(1)PPHLLYSDRDR;DRT(0.998)PPHLLYS(0.002)DRDR;DRT(1)PPHLLYSDRDR;DRT(1)PPHLLYSDRDR 162.37 3.0576e-08 9220600000.0 1672170.0 1779370.0 1571580.0 1395390.0 1475470.0 1571250.0 1318610.0 1372440.0 1719840.0 1133850.0 True False 1579411.396711747 1693886.3943111775 1672886.5614169077 1528007.4460607003 1591581.0947240805 1561443.2459244074 1451907.9671934503 1367679.325969904 1407560.4096382663 1123804.9711219512 1.4054141397283024 1.5072778977121672 1.4885915300292547 1.3596731508806312 1.4162431521682315 1.3894254662048164 1.2919572385802292 1.2170077203026435 1.2524952690261084 1.0 20.09996025647689 -7.749296643751477 0.372056667120901 0.973885370420512 1.490619134999214 0.9101978759797427 0.042713060142727716 0.3425359106655959 0.14246974676347016 0.06631562365192183 0.04412893286919039 1.7811617338156293e-08 7.749296643751477 0.5167337645787019 DRT(ph)PPLLYR ddPTM_KYSE-520_SHP099_60min_R1 9 DRTPPLLYR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DRT(1)PPLLYR;DRT(0.999)PPLLY(0.001)R;DRT(1)PPLLYR;DRT(1)PPLLYR;DRT(1)PPLLYR;DRT(1)PPLLYR;DRT(1)PPLLYR;DRT(1)PPLLYR;DRT(1)PPLLYR 111.79 0.0024965 97822250000.0 3929010.0 3447554.0 3340768.0 3016205.0 3414045.0 3469972.0 3161448.0 3351402.0 4020120.0 3450510.0 True False 3711059.983012744 3281928.330955949 3556119.2506977962 3302864.2163449023 3682710.918241147 3448314.6176272393 3481038.0165991425 3339776.7686851067 3290167.546978204 3419941.165856157 1.0851239255408969 0.9596446756809464 1.0398188384645932 0.9657663849074007 1.0768345827140005 1.0082964736511715 1.0178648835696242 0.9765597145438081 0.9620538446176851 1.0 21.70554007558808 -7.2534671025878446 6.325500845413782 0.9767919393258143 1.0197213427396195 0.19486083948405242 0.03918139713868047 0.23569625164960348 47.719398745860445 0.01861262520997155 0.009888118904336845 5.578698586753281e-08 7.2534671025878446 0.042929403413805134 DRTPPLLYR ddPTM_KYSE-520_SHP099_60min_R1 1 DRTPPLLYR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 0 133.23 0.0018823 0.0 54234.0 48405.0 47359.0 36472.0 45323.0 45094.0 42276.0 39138.0 58192.0 48463.0 False True 51225.53190720139 46079.55114261372 50411.8369170792 39938.28791429334 48889.66224740551 44812.55161923004 46549.670653999456 39002.23941287789 47625.799700943164 48033.65552364348 1.0664508322084039 0.9593180165089059 1.0495107309137677 0.8314646778160496 1.017820978112746 0.9329406877469919 0.9691053105688872 0.8119773310544712 0.9915089572456222 1.0 15.55175798627489 -1.8145836649772096 0.6143721230372858 0.9336654573750932 3.8395820671818357 0.19448515025364277 0.07204513198937178 93.65678261485526 2.01981880116506 0.03024402748366172 342.17799343431795 0.015325559375663834 1.8145836649772096 2.9059166098067424 DRTQQYDDLIDEFMK ddPTM_KYSE-520_SHP099_60min_R1 1 DRTQQYDDLIDEFMK 15 1 A0A1W2PQ37;A0A1W2PQF8;A0A1W2PR68;A0A1W2PQT3;A0A1W2PPH1;A0A1W2PQH3;A0A1W2PQY8;P23368-2;P23368 A0A1W2PQ37 ME2 NAD-dependent malic enzyme, mitochondrial 0 117.37 0.00016251 69607000.0 48803.0 55787.0 31773.0 34946.0 58988.0 47284.0 43861.0 34692.0 40996.0 44529.0 False True 46095.80030363146 53106.908782005834 33821.13841859745 38267.25733310198 63630.02000419118 46988.88301689075 48294.89792210879 34571.66154917368 33552.15982505954 44134.50770303778 1.0444389821631268 1.203296729609844 0.7663196029321415 0.8670597979836092 1.4417294610450935 1.0646744568458504 1.0942661521697374 0.7833249615423741 0.760225083982304 1.0 15.429619484866997 -7.258508035530776 24.779723466177376 0.8288312602382047 1.068785989699479 0.23696879779479496 0.18074696200330606 325.53335876340145 2751882.2839849303 0.09344841852358275 0.05087863985265308 5.51431999420436e-08 7.258508035530776 0.23995472946127416 DRVHHEPQLSDK ddPTM_KYSE-520_SHP099_60min_R1 7 DRVHHEPQLSDK 12 1 O43852;O43852-3;O43852-5;O43852-6;O43852-10;O43852-13;O43852-14;O43852-11;O43852-2;O43852-4;O43852-9;O43852-8;O43852-12;O43852-7 O43852 CALU Calumenin 0 ;;;;;; 134.08 4.5959e-05 7535600000.0 12601420.0 13983750.0 9392970.0 12239140.0 12377540.0 13602070.0 10410220.0 12657440.0 12986690.0 9342790.0 False True 11902394.11229201 13311949.659963327 9998455.875483388 13402344.185768366 13351581.979430998 13517174.43569833 11462586.631556414 12613534.294908691 10628634.4638136 9260020.14918064 1.285352938821108 1.437572429163798 1.0797445053473331 1.4473342357634345 1.4418523679575788 1.4597348837188415 1.2378576338811385 1.3621497676789378 1.1477982004989546 1.0 23.142583902020416 -7.9498943079911 2.7201165465408077 1.0000678507537482 1.3465819018057834 0.49646894494133553 0.1132862333590125 0.20492240307390708 3.3536478537850583 0.10863143120601035 0.029453828898800494 1.1222915473774985e-08 7.9498943079911 0.34651405105203525 DRVLDDVSIRS(ph)PETK ddPTM_KYSE-520_SHP099_60min_R1 2 DRVLDDVSIRSPETK 15 2 E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-4;Q12830;F5GXF5;Q12830-2 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF 1 DRVLDDVSIRS(0.999)PET(0.001)K;DRVLDDVS(0.004)IRS(0.996)PETK 172.95 1.5581e-08 545590000.0 596840.0 575880.0 501840.0 513490.0 531630.0 495000.0 456970.0 525830.0 703200.0 532560.0 True False 563732.0954289568 548213.8603864975 534189.4093723902 562291.9352136014 573466.2564390757 491910.52138907305 503164.9871974197 524006.0184596443 575516.6062294343 527841.9327254101 1.067994148396348 1.0385947504320108 1.0120253360967482 1.0652657554323421 1.0864355802088197 0.9319277057985671 0.9532493650124086 0.9927328352903685 1.0903199813206677 1.0 19.009746439977793 -6.247056060604062 24.953543203416544 0.9906669876802919 1.0514906958360004 0.3310971178448533 0.04275460061445965 1003.5565706349064 1741067.0752527625 0.014958325170040952 0.014892993653377228 5.661662011469952e-07 6.247056060604062 0.06082370815570848 DRVQDLS(ph)WLR ddPTM_KYSE-520_SHP099_60min_R1 1 DRVQDLSWLR 10 1 Q8N944 Q8N944 AMER3 APC membrane recruitment protein 3 1 DRVQDLS(1)WLR 43.382 0.06779600000000001 363030000.0 216570.0 164130.0 166210.0 96193.0 186530.0 153610.0 145710.0 173430.0 192900.0 149910.0 True False 204556.4303784083 156244.9484358473 176924.16254540294 105335.1537985201 201208.84978947873 152651.26301126354 160439.78879255994 172828.41180886625 157874.22261327886 148581.91402821522 1.3767249649211255 1.0515744763267547 1.190751671914831 0.7089365787717427 1.3541947625689479 1.0273879160169894 1.0798069862129582 1.1631860643284397 1.0625399709368333 1.0 17.18089899051667 -4.258466673509126 24.01828277731421 1.0762312220536692 1.3767251527399347 0.25757330298015735 0.1555153461223832 222.81150651857942 1800061.3820482162 0.03644075125508066 0.24658216059790222 5.514845200703904e-05 4.258466673509126 0.3004939306862655 DRVTDALNATR ddPTM_KYSE-520_SHP099_60min_R1 2 DRVTDALNATR 11 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 111.31 0.0022069000000000004 408330000.0 1209670.0 1214640.0 996340.0 902590.0 1221220.0 1178800.0 896630.0 994430.0 1315650.0 1028950.0 False True 1142567.1936826403 1156286.8711881915 1060565.6706003656 988371.8822264208 1317323.0662086932 1171442.6719463428 987270.1106655196 990980.5544317067 1076761.1248375361 1019834.3035109856 1.1203459128106614 1.1337987624140906 1.0399392008575845 0.9691494773452423 1.2917030361437565 1.1486598047480996 0.9680691336491064 0.9717074146457478 1.0558196769127774 1.0 19.95990334022526 -6.762748791442063 24.999105007464173 0.9965413290918536 1.1156990529190793 0.34214431418347524 0.08036331835070457 44.67582689131728 852910.4069631805 0.03450832690028716 0.024712343298488135 1.72683645558684e-07 6.762748791442063 0.11915772382722578 DRWQER ddPTM_KYSE-520_SHP099_60min_R1 6 DRWQER 6 1 Q09161 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 0 ;;;;; 173.59 0.0038768 5095470000.0 2338010.0 2612010.0 1674550.0 1543510.0 2575170.0 2578920.0 1923090.0 1925730.0 1952500.0 4056300.0 False True 2208315.924592615 2486525.118893056 1782494.1723747342 1690204.7263267948 2777821.228286988 2562824.003678199 2117494.704749736 1919050.0920987593 1597975.218519581 4020364.3377536503 0.5492825373698583 0.6184825329244623 0.44336632768230405 0.42041083452431194 0.6909376849758536 0.6374606350005976 0.5266922415128353 0.4773323835548235 0.3974702500252597 1.0 21.93889481810466 -10.510626106225072 4.8680131344359125 1.0019393995044428 0.5323232036142795 0.6997694559145953 0.09252145883652688 0.002091868880396261 0.00021029226553945257 0.09622754065686509 0.023253307061465195 3.085843478240264e-11 10.510626106225072 -0.46961619589016323 DRYDS(ph)DRYR ddPTM_KYSE-520_SHP099_60min_R1 1 DRYDSDRYR 9 2 E7EX17;P23588-2;P23588;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 DRYDS(1)DRYR 77.124 0.011467 0.0 120700.0 155450.0 157390.0 134230.0 170650.0 123410.0 131660.0 113810.0 200480.0 127070.0 True False 114004.53039051536 147981.94866479313 167535.61123290384 146987.17884227878 184079.18413431945 122639.75241338492 144969.47767777383 113415.21967345361 164077.88568952904 125944.25865896392 0.9051983123678597 1.1749797111871816 1.3302361935097207 1.1670812183689578 1.461592502066928 0.9737621525525267 1.1510606296895758 0.9005191731729759 1.3027817816914118 1.0 16.942425830784202 DRYDSDR ddPTM_KYSE-520_SHP099_60min_R1 4 DRYDSDR 7 1 E7EX17;P23588-2;P23588;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ;;; 127.68 0.0023788 2054250000.0 1027500.0 932830.0 682820.0 675010.0 982060.0 1147470.0 843390.0 985890.0 865240.0 1048470.0 False True 970502.5267295323 888015.4465936238 726835.6697506277 739162.7474508425 1059342.534842952 1140308.2140976142 928648.0918931921 982470.177698456 708134.2269254202 1039181.3714973178 0.933910627488608 0.8545336463394406 0.6994310037557325 0.7112933004041541 1.019401005347685 1.0973139486272607 0.89363427536729 0.9454270492578704 0.681434681517718 1.0 19.987016043512327 -5.763404045920588 24.99980122272576 0.9424004054756325 0.7965336007815297 0.24691239396309994 0.11944318481559509 78.91760959186968 1004208.3334184492 0.03852538785677138 0.04590502320826413 1.724233005180355e-06 5.763404045920588 -0.14586680469410285 DRYDSDRYR ddPTM_KYSE-520_SHP099_60min_R1 5 DRYDSDRYR 9 2 E7EX17;P23588-2;P23588;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ;;;; 163.65 8.196200000000001e-05 10034190000.0 4072036.0 4058460.0 3815160.0 3517500.0 3941329.0 3673290.0 3497482.0 3420698.0 5008400.0 2877671.0 False True 3846152.0456774873 3863485.48972734 4061091.3180718343 3851802.142425058 4251489.169205583 3650363.6345722615 3851041.6126949377 3408832.397034914 4099000.811489619 2852177.0737341596 1.3484969362866326 1.3545742041426425 1.4238566586452945 1.3504779131339688 1.4906119288166775 1.2798516852928388 1.3502112642862785 1.1951685708531288 1.4371480821571427 1.0 21.4436321217469 -12.613109813158655 0.253718701345428 3.3801554349462594e-12 1.3929457797139257 0.6577310722914899 0.07782753303311733 49.49760096157647 0.9285530599694208 25.815602372512746 0.10738743805724593 2.4371944857300054e-13 12.613109813158655 1.3929457797105456 DRYDSFIELQEK ddPTM_KYSE-520_SHP099_60min_R1 4 DRYDSFIELQEK 12 1 Q9NSD9-2;Q9NSD9 Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit 0 ;;; 220.53 7.7249e-11 2418030000.0 2605410.0 2326980.0 1545150.0 1490500.0 2195960.0 2206450.0 1713680.0 1873670.0 1883080.0 1892560.0 False True 2460882.7135439315 2215188.387931811 1644752.841327413 1632156.6718648325 2368769.5586967436 2192678.7271089274 1886915.4983050872 1867170.6760878644 1541160.1405837927 1875793.3907893985 1.311915654265264 1.1809341043682766 0.8768304917820636 0.8701153761811501 1.2628094172460453 1.168934029662069 1.005929281748353 0.9954031639391238 0.8216044198424324 1.0 20.83906950032319 -4.556762450642384 5.914389819288226 1.0111600898832682 1.28276763465567 0.38776682620530356 0.1278796328448653 0.17210571858245702 16.802569080106935 0.03550824253147332 0.10151965595435712 2.774837463596462e-05 4.556762450642384 0.2716075447724018 DRYNS(ph)DNDR ddPTM_KYSE-520_SHP099_60min_R1 1 DRYNSDNDR 9 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 DRY(0.071)NS(0.929)DNDR 49.934 0.050945 174030000.0 213150.0 180270.0 176060.0 181300.0 189820.0 205200.0 205150.0 203750.0 240610.0 210390.0 True False 201326.14459600937 171609.55860921333 187409.10930596013 198530.6974901675 204757.7540719394 203919.27068492482 225888.5640710568 203043.23880560734 196921.28928450504 208526.10828094333 0.9654721236381894 0.8229643761346516 0.8987321100984983 0.9520663821275119 0.9819286216000976 0.9779076220527178 1.083262743132008 0.9737065563610432 0.9443483643745783 1.0 17.66986850045381 -5.48918041747069 2.04447185376989 0.9972357687014279 0.8872741460579308 0.4694011161503554 0.04644425945691982 0.2736196512463906 2.2793528499500866 0.015003236507757407 0.02400459134370482 3.2420490603510064e-06 5.48918041747069 -0.10996162264349718 DRYS(ph)AGK ddPTM_KYSE-520_SHP099_60min_R1 1 DRYSAGK 7 1 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 DRYS(1)AGK 76.416 0.03106 626270000.0 1179300.0 945300.0 826580.0 1039200.0 1054600.0 1327300.0 1483700.0 721800.0 1122800.0 1948500.0 True False 1113881.8781237348 899886.3690757714 879862.6693747612 1137965.2555531256 1137591.0201468102 1319015.8283630633 1633686.875516581 719296.2442693863 918927.8234846544 1931237.8059100602 0.5767709573181427 0.46596352159319737 0.455595197381786 0.5892413933026133 0.5890476132279014 0.6829898546551606 0.8459273480029749 0.37245348142427814 0.47582323661669756 1.0 20.881094393003387 -5.591235533419855 2.2368314369062623 0.6428269839001086 0.49757336797664053 0.15034492793331267 0.1684261183053581 0.6905350156120833 7.001759081462297 0.05494815393075452 0.07942159224006623 2.563093602241492e-06 5.591235533419855 -0.14525361592346808 DRYS(ph)AGKR ddPTM_KYSE-520_SHP099_60min_R1 5 DRYSAGKR 8 2 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 DRY(0.001)S(0.999)AGKR;DRY(0.001)S(0.999)AGKR;DRYS(1)AGKR;DRYS(1)AGKR;DRYS(1)AGKR 93.839 0.0023469000000000003 17093740000.0 4273230.0 3941650.0 3834740.0 4286250.0 3696660.0 3650640.0 3779950.0 3860120.0 4654290.0 3584470.0 True False 4036185.413427189 3752287.217462732 4081933.476200939 4693613.9112919485 3987566.110881758 3627855.001623846 4162064.2347569587 3846730.144678776 3809188.2611029446 3552714.384475458 1.1360849695839295 1.0561747473591914 1.1489619019299853 1.3211346039529546 1.1223998552505379 1.021150199260806 1.1715167008482918 1.082758062817574 1.0721909641113336 1.0 21.76049027919687 -6.000011938909238 24.999999999999986 1.080037357765235 1.164733724629095 0.26490066841614535 0.07458344492658549 0.7148242574299392 1496502.9904276712 0.024515516438285836 0.027512539312246054 9.99972510023418e-07 6.000011938909238 0.08469636686386006 DRYSAGK ddPTM_KYSE-520_SHP099_60min_R1 2 DRYSAGK 7 1 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ; 96.311 0.0066343999999999995 1414540000.0 1705800.0 1890060.0 769560.0 918870.0 2074910.0 2694000.0 1512180.0 1116670.0 1263540.0 5445700.0 False True 1611175.8735720045 1799258.6805621001 819167.0689395358 1006199.1285316597 2238193.6123770317 2677185.746711442 1665045.9118545984 1112796.5324027368 1034112.9872513359 5397455.334690495 0.2985065690523947 0.3333531393947653 0.1517691241786828 0.18642101993223031 0.41467570801220455 0.49600887468297294 0.3084872052859844 0.20617058658189852 0.19159269009692226 1.0 22.363847968954605 -10.85572593078417 2.6975133426929587 1.2897652616526885 0.28993648145683876 0.8105083235503175 0.10335482031382788 18535985.12678392 12754342.381269056 34590194.94148145 0.029667244400755657 1.3940362566601142e-11 10.85572593078417 -0.9998287801958496 DS(ph)DGVDGFEAEGK ddPTM_KYSE-520_SHP099_60min_R1 1 DSDGVDGFEAEGK 13 0 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 DS(1)DGVDGFEAEGK 191.01 1.6562e-08 158790000.0 614730.0 552910.0 504730.0 525840.0 624480.0 541850.0 594110.0 643430.0 688410.0 675960.0 True False 580629.7014661263 526347.3736651703 537265.7033965533 575815.6755004387 673623.0231948423 538468.1131609484 654168.4367548397 641198.0915076911 563412.0974038739 669971.5202889218 0.8666483333735331 0.7856264896725546 0.8019231969216546 0.8594629145610863 1.0054502360105484 0.8037179146491731 0.976412305515215 0.957052758348859 0.840949324474129 1.0 19.35374024402033 -5.530900178051043 24.20191577585073 0.9251292817805743 0.8174672085425795 0.38835076861154605 0.06419295367150082 127.20260700519687 383787.2057053743 0.018142043147860908 0.023469106634670136 2.9450984825711333e-06 5.530900178051043 -0.10766207323799482 DS(ph)DGVDGFEAEGKK ddPTM_KYSE-520_SHP099_60min_R1 3 DSDGVDGFEAEGKK 14 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 DS(1)DGVDGFEAEGKK;DS(1)DGVDGFEAEGKK;DS(1)DGVDGFEAEGKK 135.08 4.9492e-06 887690000.0 2412360.0 2253880.0 2215320.0 1832450.0 1946330.0 2177500.0 1870720.0 1987440.0 3045130.0 2072800.0 True False 2278541.5818795627 2145600.221657146 2358123.071837327 2006605.4970538195 2099495.0978971585 2163909.414797389 2059830.63406779 1980546.0345119848 2492211.1534804236 2054436.6046139977 1.109083423047591 1.0443740229503342 1.1478198288237704 0.97671813895218 1.0219322870231018 1.0532860492932854 1.0026255516678773 0.9640336577258873 1.213087397237394 1.0 20.970311382127083 -5.260903999219395 24.999998490185 1.030705283991048 1.094820582056111 0.16213880909122658 0.06964072313742707 90.84665723288792 4242062.534559948 0.018603130095412364 0.02974850866308798 5.483981749217324e-06 5.260903999219395 0.064115298065063 DS(ph)FIGTPYWMAPEVVMCETSK ddPTM_KYSE-520_SHP099_60min_R1 2 DSFIGTPYWMAPEVVMCETSK 21 0 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 DS(0.953)FIGT(0.046)PY(0.002)WMAPEVVMCETSK;DS(0.914)FIGT(0.086)PYWMAPEVVMCETSK 151.23 4.6295e-07 62226000.0 51410.0 48249.0 40137.0 46802.0 49147.0 46452.0 45806.0 46243.0 60211.0 48247.0 True False 48558.18481670579 45931.0456167745 42724.29524147062 51250.04800846557 53014.5892918218 46162.0758375055 50436.517503479525 46082.59382619734 49278.20019579133 47819.569115597995 1.0154458878398147 0.960507308331068 0.893447934216844 1.0717379716361477 1.1086379545508969 0.9653385986376057 1.054725469850123 0.9636764755198499 1.0305028068460274 1.0 15.54531351006761 -5.2714033515772885 24.940234835521608 1.0281765123950415 0.9568710674737596 0.29568464826987606 0.050449388230726575 844.7331734238657 2114400.6984831435 0.014566377877802388 0.021888836966895454 5.3529926666750655e-06 5.2714033515772885 -0.07130544492128188 DS(ph)FPWEVPK ddPTM_KYSE-520_SHP099_60min_R1 1 DSFPWEVPK 9 0 P31153 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 1 DS(1)FPWEVPK 133.07 0.00052481 84373000.0 557100.0 555600.0 478450.0 462370.0 508240.0 496380.0 585590.0 563010.0 576530.0 514400.0 True False 526196.5524486835 528908.1420273978 509291.65254706715 506313.50578339107 548235.5965099703 493281.90829718846 644787.1520076534 561057.049717522 471846.6851385882 509842.81619714433 1.03207603546034 1.0373945169463392 0.9989189537783659 0.9930776500097069 1.0753031701009206 0.967517620384491 1.26467831167465 1.1004510250872581 0.9254748133121407 1.0 18.959693009274936 DS(ph)GRLSPDLSVCGQPR ddPTM_KYSE-520_SHP099_60min_R1 1 DSGRLSPDLSVCGQPR 16 1 Q8TF76-2;Q8TF76 Q8TF76-2 GSG2 Serine/threonine-protein kinase haspin 1 DS(0.702)GRLS(0.298)PDLSVCGQPR 195.89 3.9406e-12 317940000.0 297830.0 246920.0 272260.0 221280.0 255480.0 232330.0 271490.0 271270.0 300710.0 242630.0 True False 281308.7761906144 235057.5925655236 289810.31523140235 242310.38466974205 275584.8225176436 230879.94229156253 298934.8586870642 270329.0276848939 246108.64428221405 240480.4869632834 1.1697779713560073 0.9774497529249109 1.2051302743563166 1.0076093396581405 1.1459758169889267 0.960077656225028 1.2430732424984887 1.1241204269773781 1.023403800408097 1.0 17.875560310205934 -7.869841086429822 5.135624572360462 1.0022364598730116 1.1011168661183748 0.1434870146511651 0.09069271534540731 0.3902940070390241 14.888708716716463 0.08129402445817875 0.02126744978092055 1.3494565746403342e-08 7.869841086429822 0.0988804062453632 DS(ph)GVGASLTRPNRR ddPTM_KYSE-520_SHP099_60min_R1 1 DSGVGASLTRPNRR 14 2 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 DS(0.615)GVGAS(0.068)LT(0.318)RPNRR 56.121 0.055466999999999995 0.0 319690.0 264780.0 263290.0 242650.0 278070.0 228700.0 262930.0 248300.0 299640.0 309400.0 True False 301956.1584137846 252059.57135711703 280262.09467889456 265711.383044617 299952.5269981259 227272.59846804265 289509.530349515 247438.70525365538 245232.92930970917 306658.9567095573 0.9846644026111822 0.8219540497421297 0.9139211118634839 0.8664719462157353 0.9781306576419903 0.7411249320961364 0.9440765515409848 0.8068856292627691 0.7996927007808681 1.0 18.226275563396023 -6.231094213709773 24.999808265059652 0.8516437690538182 0.9054318479590169 0.09334470843036513 0.08221400189950039 1716.309590143602 1413979.6367639173 0.02544524043945788 0.025442451250762346 5.873619193007938e-07 6.231094213709773 0.053788078905198655 DS(ph)GVPGLEADTTGIQVK ddPTM_KYSE-520_SHP099_60min_R1 1 DSGVPGLEADTTGIQVK 17 0 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 DS(1)GVPGLEADTTGIQVK 163.41 2.8502e-06 0.0 90592.0 80438.0 82562.0 73093.0 85278.0 86569.0 64609.0 90907.0 93592.0 105800.0 True False 85566.68116932527 76573.6377401005 87884.07862387062 80039.73674378831 91988.89343455304 86028.69075985998 71140.30824307536 90591.66483485319 76598.05206232241 104862.69431115453 0.8159878184650393 0.7302276395157926 0.8380871691423072 0.7632813296432177 0.8772318319573059 0.8203936712191542 0.67841388885149 0.8639074689998377 0.7304604613251338 1.0 16.678141994061015 -10.10936779257607 4.3843162192050675 1.0000249746137835 0.7919269657813915 0.5135514922465577 0.06104824691362633 16844248.386140108 19419757.20175996 3373.5271215041466 0.014025767875191993 7.773779312680236e-11 10.10936779257607 -0.20809800883239193 DS(ph)HSPDLQLPTPEVIPSSGSK ddPTM_KYSE-520_SHP099_60min_R1 2 DSHSPDLQLPTPEVIPSSGSK 21 0 H3BQK9;H3BPE1;H0Y4F5;H0Y6T5 H3BQK9 MACF1 1 DS(0.55)HS(0.45)PDLQLPTPEVIPSSGSK;DS(0.5)HS(0.5)PDLQLPTPEVIPSSGSK 124.51 4.1716000000000005e-05 1115280000.0 866160.0 780160.0 685370.0 619510.0 701430.0 709020.0 631060.0 701360.0 787860.0 621840.0 True False 818112.3781528466 742679.942555966 729550.0468307734 678388.0441375269 756628.550409232 704594.7431823851 694853.7033520886 698927.1458586549 644804.4843343602 616330.9813841988 1.3273912927684945 1.2050018009609123 1.1836984816052885 1.100687884639445 1.2276334847064532 1.143208380665787 1.1274034963998372 1.1340126765799698 1.0461983963327848 1.0 19.233345787960875 -1.0000000000004126 0.10913660070044813 0.9324188824700622 1.9605663687218937 0.7484525983274335 0.04434404644183903 59.71003128361039 0.45650604009822054 0.43371324433976494 9.240275938412903 0.099999999999905 1.0000000000004126 1.0281474862518314 DS(ph)LGAYASQDANEQGQDLGKR ddPTM_KYSE-520_SHP099_60min_R1 3 DSLGAYASQDANEQGQDLGKR 21 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DS(1)LGAYASQDANEQGQDLGKR;DS(1)LGAYASQDANEQGQDLGKR;DS(1)LGAYASQDANEQGQDLGKR 159.36 3.9054e-09 2880440000.0 397470.0 439920.0 408840.0 346170.0 391870.0 398140.0 349484.0 430200.0 462530.0 367810.0 True False 375421.5467631984 418785.5828666177 435194.48056712863 379069.89272019407 422707.9395646978 395655.0605774656 384813.2533551507 428707.73660943523 378546.2114324514 364551.48955185 1.029817618423974 1.1487693641889618 1.1937805578633662 1.039825384299463 1.1595287680331263 1.0853201040650027 1.055579978093654 1.1759867917052094 1.0383888758699227 1.0 18.475763070813215 -7.9645846156952445 7.9554509936314615 1.0000360249662938 1.1115138179428334 0.3200444027314798 0.05500055231828465 0.2034891960582812 37.35889882230171 0.05092724889073827 0.013172287047325178 1.0849641402254478e-08 7.9645846156952445 0.11147779297653959 DS(ph)LGTYSSR ddPTM_KYSE-520_SHP099_60min_R1 8 DSLGTYSSR 9 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DS(0.979)LGT(0.021)YSSR;DS(0.989)LGT(0.011)YSSR;DS(0.986)LGT(0.014)YSSR;DS(0.985)LGT(0.015)YSSR;DS(0.998)LGT(0.002)YSSR;DS(0.999)LGT(0.001)YSSR;DS(0.912)LGT(0.088)YSSR;DS(0.996)LGT(0.004)YSSR 217.78 5.7809e-09 6949040000.0 10334770.0 9880000.0 10218000.0 8949070.0 9703070.0 9856160.0 9101150.0 9483350.0 10743390.0 10116310.0 True False 9761479.706246763 9405349.969817653 10876668.629378038 9799586.922164004 10466646.406083738 9794644.049483083 10021183.060664373 9450454.472280532 8792661.19482258 10026687.363770088 0.9735498227977455 0.938031637827111 1.0847718927269268 0.9773504016464424 1.043878803272891 0.9768574299897433 0.9994510347330062 0.9425300829093678 0.8769258356048405 1.0 23.25734170852232 -7.300655525077335 4.395148588634905 0.9302670985983309 1.000333895377468 0.24312362341729643 0.047385359749242 0.27175211736899896 12.163793691913275 0.02619606537273176 0.012377819698011414 5.004313111176552e-08 7.300655525077335 0.07006679677913719 DS(ph)LSPVLHPSDLILTR ddPTM_KYSE-520_SHP099_60min_R1 3 DSLSPVLHPSDLILTR 16 0 Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5 Q9HCN4-3 GPN1 GPN-loop GTPase 1 1 DS(0.5)LS(0.5)PVLHPSDLILTR;DS(0.659)LS(0.341)PVLHPSDLILTR;DS(0.562)LS(0.438)PVLHPSDLILTR 108.18 0.00024061 127103000.0 147665.0 187324.0 311073.0 156299.0 105064.0 197360.0 97891.0 103068.0 140494.0 210558.0 True False 139473.72808712034 178324.67386094356 331125.26331439824 171153.60996699196 113331.93906761265 196128.20303302503 107786.77760409353 102710.48116425215 114983.83116552638 208692.619931645 0.6683213241215883 0.8544848108157915 1.586664940153872 0.8201229637303489 0.5430567650390957 0.9397946276071703 0.5164858136305822 0.49216153977027965 0.5509721963488123 1.0 17.671020057319442 -5.516952797847728 24.560222961043095 0.656319697291018 1.0491404870987648 0.26087618051598993 0.27216700661504745 266.78878467765276 1105714.8751334797 0.08065073579368365 0.10778543463876807 3.0412155482238846e-06 5.516952797847728 0.3928207898077468 DS(ph)PFKPK ddPTM_KYSE-520_SHP099_60min_R1 1 DSPFKPK 7 1 Q15291 Q15291 RBBP5 Retinoblastoma-binding protein 5 1 DS(1)PFKPK 85.73100000000001 0.012197 0.0 279000.0 211880.0 194720.0 208410.0 232690.0 259610.0 227100.0 230960.0 249240.0 234180.0 True False 263523.3138272887 201700.96676163637 207271.96276301565 228217.22373924888 251001.37917500577 257989.67769255996 250057.48428241262 230158.85366646922 203984.29882910146 232105.34738928304 1.1353608040116026 0.8690061173961108 0.8930081322744483 0.9832484529384277 1.0814114452694217 1.1115197499515777 1.0773447794075186 0.9916137489088126 0.8788435989239944 1.0 17.824420235219733 -4.208087162850371 22.337854623934764 0.9936292155834813 1.1353638537906756 0.22267958919210296 0.08221670322094506 28414.729927317883 11895497.947312329 0.022956856951909098 22.812799400594056 6.193167658022366e-05 4.208087162850371 0.14173463820719434 DS(ph)PGAVAAPLISGVEIK ddPTM_KYSE-520_SHP099_60min_R1 4 DSPGAVAAPLISGVEIK 17 0 Q5THJ4-2;Q5THJ4;H3BLS7;A0A2R8YD87 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 DS(1)PGAVAAPLISGVEIK;DS(1)PGAVAAPLISGVEIK;DS(1)PGAVAAPLISGVEIK;DS(1)PGAVAAPLISGVEIK 344.29 5.6191000000000005e-59 811850000.0 956870.0 784580.0 650950.0 568942.0 599980.0 752010.0 652070.0 805010.0 796150.0 783500.0 True False 903790.5136269466 746887.5991214105 692911.278556826 623014.0766213499 647195.0125807731 747316.4266460547 717987.5991899291 802217.6082007468 651589.229308253 776558.799553776 1.1638404125306159 0.961791431055298 0.8922843691359683 0.8022754709358061 0.8334140479158338 0.9623436461932767 0.9245759620552841 1.0330416816623735 0.8390726235832591 1.0 19.56673564130693 -4.28206413187599 2.8740318880288744 0.9081771828664563 1.2024559710460416 0.5375779684374664 0.0701271275892559 0.3050527291394601 3.6817563221839285 0.01883475126152041 0.20440400865175354 5.223190529186377e-05 4.28206413187599 0.2942787881795853 DS(ph)PIRAEMPGNLQHYGR ddPTM_KYSE-520_SHP099_60min_R1 1 DSPIRAEMPGNLQHYGR 17 1 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 DS(1)PIRAEMPGNLQHYGR 184.2 2.3076e-12 186550000.0 146920.0 154080.0 136280.0 134890.0 166860.0 140130.0 120540.0 147150.0 160310.0 125270.0 True False 138770.0547222412 146677.7655212048 145064.82685570972 147709.9050438428 179990.93269646956 139255.39669141575 132725.35955703215 146639.5709950681 131201.74508623517 124160.20525858527 1.117669340455973 1.1813589162141187 1.1683681301394995 1.1896718818739964 1.4496668422994878 1.1215783382557407 1.0689846982824203 1.181051293284073 1.0567133391329748 1.0 16.921843322104277 -7.616391560638716 0.868082142920835 1.0072039316539436 1.2064259504512778 0.32316466393277554 0.09493367655297587 0.727130247268732 1.1066350680366426 0.09447986102580061 0.03615406657771186 2.4188472265709732e-08 7.616391560638716 0.19922201879733414 DS(ph)PRPGKPDER ddPTM_KYSE-520_SHP099_60min_R1 1 DSPRPGKPDER 11 2 A0A0A0MR03;Q9Y5B0;K7EJD2;A0A0J9YWJ4;A0A0J9YWB6;Q9Y5B0-4 A0A0A0MR03;Q9Y5B0-4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 DS(1)PRPGKPDER 75.589 0.014985 0.0 666250.0 614840.0 550360.0 574650.0 582720.0 580800.0 579000.0 621920.0 632240.0 584050.0 True False 629291.7843635533 585302.1635063452 585837.0862071353 629264.5632251783 628576.7487767385 577175.0117631785 637530.9704954508 619762.704677219 517441.15347340313 578875.7713840238 1.0870929748173614 1.0111015047441987 1.0120255764142068 1.0870459506720773 1.0858577605932367 0.9970619609510016 1.1013260564890965 1.070631619622703 0.8938725354427294 1.0 19.1428942488381 -7.74887697441572 24.996794827052565 0.9469362601602166 1.0550283120014998 0.5138417756310578 0.042615843942490725 153.3060868461439 305053.8631841803 0.02861247153921977 0.010651300792837893 1.7828837456588787e-08 7.74887697441572 0.10809205184128323 DS(ph)PTREPGALPCACGQLPDLEDELSLLDPLPR ddPTM_KYSE-520_SHP099_60min_R1 1 DSPTREPGALPCACGQLPDLEDELSLLDPLPR 32 1 Q96RY5 Q96RY5 CRAMP1L Protein cramped-like 1 DS(0.834)PT(0.166)REPGALPCACGQLPDLEDELSLLDPLPR 53.482 0.048624 27255000.0 12747.0 16835.0 15670.0 12114.0 15248.0 15201.0 13835.0 13467.0 17619.0 16600.0 True False 12039.89849948549 16026.22133014983 16680.11327288647 13265.310917793087 16447.93085074772 15106.12492047535 15233.576816588196 13420.28612022142 14419.833738845844 16452.93691460457 0.7317780747580809 0.9740644733113903 1.013807647805435 0.8062579335618821 0.9996957343310298 0.9181415451162576 0.9258879977267768 0.8156772368286909 0.8764291636009358 1.0 14.006057513293912 -4.251210024257721 24.518752085077704 0.9209172899912733 0.7317779368464322 0.4012073127147997 0.07081469287110789 1171.262188231677 2807327.76645079 0.01765849387383346 0.23141606266791392 5.607767195415334e-05 4.251210024257721 -0.1891393531448411 DS(ph)PYQSR ddPTM_KYSE-520_SHP099_60min_R1 1 DSPYQSR 7 0 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 DS(0.999)PY(0.001)QSR 88.177 0.016375 80731000.0 285890.0 259960.0 229980.0 257140.0 270350.0 307910.0 285660.0 245500.0 292660.0 319660.0 True False 270031.1117924146 247471.13139208482 244804.8787810102 281578.50828803977 291625.0069189168 305988.21947658516 314537.300572937 244648.4178001306 239520.32135822802 316828.0610917165 0.8522954401890717 0.7810896880136068 0.7726742320029008 0.8887423270457329 0.9204519508595427 0.9657863587657616 0.9927697044545674 0.7721803963863824 0.7559946569533524 1.0 18.273340593329763 -5.314963979783833 7.020889888871375 0.8977794651281501 0.8000430161686031 0.2361351411373117 0.08024594280979973 0.394620926864538 44.203983514420294 0.02451885105830688 0.03671681985071373 4.842125263181432e-06 5.314963979783833 -0.09773644895954703 DS(ph)QDGSSYR ddPTM_KYSE-520_SHP099_60min_R1 3 DSQDGSSYR 9 0 Q14847;Q14847-2;C9J9W2;Q14847-3;J3KSN1 Q14847 LASP1 LIM and SH3 domain protein 1 1 DS(1)QDGSSYR;DS(1)QDGSSYR;DS(1)QDGSSYR 143.7 0.00022428 3218910000.0 3625420.0 3264780.0 3195050.0 3276100.0 3251160.0 3437460.0 3335910.0 3482490.0 3671950.0 3541130.0 True False 3424310.7255044077 3107935.068265309 3401008.0352607523 3587459.559004617 3507007.79543002 3416005.537078956 3673136.3381441785 3470410.0550092757 3005216.442326752 3509758.3431574544 0.9756542732294851 0.885512552260035 0.9690148730300138 1.0221386227341398 0.9992163142135422 0.9732879597647295 1.0465496421727274 0.9887888896325608 0.8562459715170003 1.0 21.74294026961743 -4.985787428363586 24.13762332446386 0.9868337905952705 0.9297534396112367 0.14087502879186964 0.05142346073638722 272.1815642042501 462244.0309014301 0.013410177937628727 0.027892766888158674 1.03326702931276e-05 4.985787428363586 -0.057080350984033856 DS(ph)QGTYSSR ddPTM_KYSE-520_SHP099_60min_R1 1 DSQGTYSSR 9 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DS(0.869)QGT(0.131)YSSR 85.522 0.012526 174080000.0 518470.0 467990.0 406040.0 481940.0 504470.0 502530.0 524770.0 547860.0 566970.0 559620.0 True False 489709.43555567885 445507.05793268885 432213.98808697006 527743.4326994555 544168.9189583356 499393.5238659619 577818.8728616548 545959.6015314852 464022.54015060083 554662.2021777711 0.8828967137708895 0.8032042857499461 0.7792382217320155 0.951468174011814 0.9810816688459468 0.9003561481297847 1.0417491413566016 0.984310088893534 0.8365858324737261 1.0 19.081249889843 -5.275172256500376 22.565189266847913 0.9580896265250338 0.8199222080832425 0.5282800378053742 0.05831995960871213 157.22810683034623 258349.51289445948 0.016322807591487316 0.024404490172816085 5.306739185004859e-06 5.275172256500376 -0.13816741844179137 DS(ph)RMQLAK ddPTM_KYSE-520_SHP099_60min_R1 1 DSRMQLAK 8 1 E9PGV1 E9PGV1 GSTM2 1 DS(1)RMQLAK 51.727 0.044201 0.0 400280.0 292640.0 250610.0 235770.0 285050.0 314620.0 279170.0 272140.0 338210.0 301170.0 True False 378075.67046160257 278581.1351384045 266764.7215901771 258177.50991316457 307481.81328735815 312656.33987763687 307391.2280366407 271196.00985795335 276799.58958028565 298501.8681067141 1.2665772340374128 0.9332642938060677 0.8936785665100394 0.864910868232377 1.0300833801731308 1.0474183691401977 1.0297799138957102 0.9085236604315021 0.9272960043296281 1.0 18.18738043473714 -4.258553723615357 24.953205026494196 0.9587268692052309 1.2665773483125107 0.6970377595935042 0.06074477112170586 167.50938964013443 1448429.934069983 0.016894776783754898 0.11562336575338779 5.513739914380183e-05 4.258553723615357 0.3078504791072798 DS(ph)RPASPAGALKPGR ddPTM_KYSE-520_SHP099_60min_R1 1 DSRPASPAGALKPGR 15 2 Q92623 Q92623 TTC9 Tetratricopeptide repeat protein 9A 1 DS(0.5)RPAS(0.5)PAGALKPGR 51.942 0.05826900000000001 1480700000.0 792120.0 637700.0 537290.0 525530.0 627090.0 603860.0 499120.0 540880.0 634740.0 468770.0 True False 748179.5245479284 607063.9347927857 571924.5730943948 575476.2131936442 676438.4153459724 600091.0857495058 549575.9205417781 539003.8135223415 519487.21649327513 464617.0624975409 1.6103143533431648 1.3065898431054686 1.2309590397305346 1.2386032706164123 1.4559052388429077 1.2915821096274998 1.182857808939565 1.1601033561379257 1.1180975870769374 1.0 18.82568261078023 -1.000000001308319 0.09132309385684746 0.7986713725325626 2.6536201893080893 0.6522061784385289 0.09676638632860449 107.92909797508693 0.7089380980150739 1.8490196733970943 25.074444272032775 0.09999999969874841 1.000000001308319 1.8549488167755266 DS(ph)RPLSPILHIVK ddPTM_KYSE-520_SHP099_60min_R1 3 DSRPLSPILHIVK 13 1 O95487-2;O95487;O95487-3 O95487-2 SEC24B Protein transport protein Sec24B 1 DS(0.578)RPLS(0.422)PILHIVK;DS(0.925)RPLS(0.075)PILHIVK;DS(0.72)RPLS(0.28)PILHIVK 113.47 9.3279e-05 335760000.0 758490.0 657811.0 628250.0 621807.0 697850.0 689849.0 610494.0 694402.0 787010.0 576485.0 True False 716415.0476876714 626208.7721655591 668748.0002355409 680903.350326908 752766.8247766457 685543.3965045064 672208.6913672704 691993.2815366454 644108.8229076035 571377.791398543 1.253837755811484 1.0959627440765733 1.1704130092257663 1.1916867623788507 1.3174590194241231 1.1998075648451856 1.1764697569394968 1.211095866786974 1.1272906168282093 1.0 19.12408543639913 -8.085055964326985 2.6892159954272894 1.0001061235473314 1.200171959687346 0.5684449542274863 0.05412167506572267 0.2871472651681538 4.667481509106066 0.054365667737747626 0.014656131894412686 8.221367004273798e-09 8.085055964326985 0.2000658361400145 DS(ph)SFTEVPRSPK ddPTM_KYSE-520_SHP099_60min_R1 1 DSSFTEVPRSPK 12 1 O95425-2;O95425-3;A0A6I8PIX7;O95425-4;O95425 O95425-2 SVIL Supervillin 1 DS(0.577)S(0.42)FT(0.002)EVPRSPK 84.605 0.017213 648220000.0 1132800.0 1041100.0 1104500.0 1136800.0 1116400.0 1045800.0 938180.0 1089900.0 1361400.0 1145900.0 True False 1069961.3258191866 991083.9932770403 1175697.8372624824 1244841.130208616 1204254.32855291 1039272.7742801862 1033020.3901544429 1086119.391284573 1114204.0781011833 1135748.2174967094 0.9420761655937061 0.8726265011988995 1.035174714915094 1.0960537828994854 1.0603180440883226 0.915055606753085 0.9095505273442666 0.956302967992745 0.9810308842544245 1.0 20.115211610478745 -9.152413305599648 14.302926509800914 1.0000014394426542 0.974989697950588 0.012878222082202684 0.06736562208977666 0.0 0.0 0.07327216221338526 0.017771109660186975 7.040227518006224e-10 9.152413305599648 -0.025011741492066197 DS(ph)SKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_KYSE-520_SHP099_60min_R1 1 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 45 2 Q12906-7;Q12906-4;Q12906-6 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.268)S(0.268)KGEDS(0.232)AEET(0.232)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 100.59 2.9608000000000002e-05 467970000.0 203700.0 211400.0 177690.0 125240.0 160460.0 208140.0 147210.0 157330.0 255650.0 186910.0 True False 192400.35493411744 201244.02668213105 189144.18171405228 137142.77194522115 173087.28910748812 206840.9210543873 162091.42343114928 156784.25895109808 209230.4044120519 185254.12281377977 1.0385752932879186 1.0863133496058524 1.020998501092377 0.7402953837798207 0.9343235469122491 1.116525332406809 0.8749679681573728 0.8463199445698705 1.1294237409354362 1.0 17.499146124373095 -5.012477642379235 24.90060689493199 0.9407307110618974 1.0602472643420067 0.1476513651850766 0.11163524332309793 981.0700094424163 1957851.769099722 0.03023547770571428 0.056085341913695796 9.716779725866792e-06 5.012477642379235 0.11951655328010924 DS(ph)SKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK ddPTM_KYSE-520_SHP099_60min_R1 4 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK 49 2 Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.25)S(0.25)KGEDS(0.25)AEET(0.25)EAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK;DS(0.281)S(0.281)KGEDS(0.156)AEET(0.281)EAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK;DS(0.25)S(0.25)KGEDS(0.25)AEET(0.25)EAKPAVVAPAPVVEAVS(0.001)TPSAAFPSDATAEQGPILTK;DS(0.249)S(0.249)KGEDS(0.249)AEET(0.249)EAKPAVVAPAPVVEAVS(0.004)T(0.001)PSAAFPSDATAEQGPILTK 228.17 3.7495e-25 8084540000.0 3130370.0 3368710.0 2690880.0 2383360.0 2453730.0 2981440.0 2511750.0 2979690.0 3779750.0 3136700.0 True False 2956722.1358621176 3206872.1150632 2864338.430360228 2609873.817816684 2646824.5911860703 2962831.727050982 2765662.202317703 2969354.150854873 3093442.679743601 3108911.278315675 0.9510474475373226 1.031509691971846 0.9213316733541684 0.8394816011702476 0.8513670395316167 0.9530126342673133 0.889591871472146 0.9551106110894196 0.9950244322892179 1.0 21.5679780151571 -9.728994013708043 7.26656114230037 0.9999990097905637 0.9295248944675355 0.11322080429213832 0.056779249412258787 4.60750354310949e-11 0.0 0.06016494123844674 0.014592141628540929 1.8664054170900107e-10 9.728994013708043 -0.07047411532302816 DS(ph)SQEYTDSTGIDLHEFLVNTLK ddPTM_KYSE-520_SHP099_60min_R1 1 DSSQEYTDSTGIDLHEFLVNTLK 23 0 Q15032-2;Q15032-4;Q15032;Q15032-3;H7C2F9;B5MCU0;A0A0U1RRA6;B5MCG9;Q9Y2K5;H0YIX9 Q15032-2;B5MCU0 R3HDM1;R3HDM2 R3H domain-containing protein 1;R3H domain-containing protein 2 1 DS(0.5)S(0.5)QEYTDSTGIDLHEFLVNTLK 275.6 4.5507999999999996e-38 106220000.0 260210.0 274310.0 214750.0 253570.0 250500.0 221470.0 233250.0 263080.0 302040.0 193990.0 True False 245775.63258422542 261131.73585229588 228593.12861214892 277669.21656139975 270212.9248499679 220087.7235798746 256829.18630062844 262167.43688333355 247197.14980878582 192271.39952193637 1.2782745285847088 1.358141338241537 1.1889086425777464 1.4441524701635111 1.4053724345993492 1.1446721879962425 1.3357638574390605 1.3635280001871661 1.2856678134315183 1.0 17.552784651381014 -8.046687814395675 21.146106243396595 0.999999999104936 1.3150827339851574 0.5378044280579514 0.08703701651258973 1185.8026143169395 537080.8779432812 0.08367355494297098 0.021604418973233216 8.980741286741716e-09 8.046687814395675 0.3150827348802214 DS(ph)SVEVR ddPTM_KYSE-520_SHP099_60min_R1 2 DSSVEVR 7 0 O15371-2;O15371;O15371-3;B0QYA6;B0QYA5 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 1 DS(0.5)S(0.5)VEVR;DS(0.545)S(0.455)VEVR 113.26 0.0046354 624610000.0 1609510.0 1351500.0 1322450.0 1330410.0 1328640.0 1339040.0 1332660.0 1318590.0 1643450.0 1460750.0 True False 1520227.2718213617 1286571.9113571427 1407697.2429948128 1456851.7663976494 1433196.4090724974 1330682.5546683304 1467378.2783082349 1314016.1190512194 1345040.908003077 1447808.8914463029 1.0500192952280571 0.888633796185565 0.9722949287792948 1.0062459037271922 0.9899071745862755 0.9191009687328499 1.013516553861182 0.9075894800857108 0.929018267500371 1.0 20.46543975077939 -6.224493251494654 24.967727161500477 0.9517988309488388 0.9771376613751337 0.06974297900077975 0.048840016030981453 1855.8301384575996 1254148.0512786831 0.01583631651277022 0.015835941282430363 5.963575865673228e-07 6.224493251494654 0.025338830426294923 DS(ph)TEITSILLK ddPTM_KYSE-520_SHP099_60min_R1 3 DSTEITSILLK 11 0 Q8IYU2-3;Q8IYU2-4;Q8IYU2 Q8IYU2-3 HACE1 E3 ubiquitin-protein ligase HACE1 1 DS(0.997)T(0.003)EITSILLK;DS(0.999)T(0.001)EITSILLK;DS(0.994)T(0.006)EITSILLK 196.15 5.4083e-07 446360000.0 802850.0 762320.0 862470.0 650660.0 960770.0 919880.0 810090.0 807750.0 931180.0 874480.0 True False 758314.3100582031 725697.0029343523 918066.196200791 712498.530771937 1036377.1329664807 914138.68770784 891981.8029165122 804948.1037802681 762101.1851375486 866732.7875351455 0.8749113001882992 0.837278816921329 1.0592263375793476 0.8220509723627428 1.1957285427193514 1.0546949427256693 1.0291312567661954 0.9287154188194685 0.8792804380977058 1.0 19.725227755637913 -4.750634387915737 24.989115335675287 0.9977430316115743 0.8560949895738145 0.243097802466837 0.09878578558073958 303.1409149958493 701072.0324920319 0.02568815672925565 0.06651459644784047 1.7756837163869962e-05 4.750634387915737 -0.14164804203775982 DS(ph)VTSPDMDEITHDFLYILQPK ddPTM_KYSE-520_SHP099_60min_R1 1 DSVTSPDMDEITHDFLYILQPK 22 0 Q14C86-6 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 DS(0.311)VT(0.311)S(0.311)PDMDEIT(0.035)HDFLY(0.032)ILQPK 56.93600000000001 0.028747 125190000.0 15393.0 11584.0 13052.0 12419.0 13884.0 15354.0 14666.0 17572.0 19604.0 12020.0 True False 14539.11960481526 11027.487252061514 13893.352803938378 13599.298026091494 14976.591810846105 15258.169990722889 16148.582406366644 17511.046833335633 16044.40777662375 11913.512151418494 1.2203890355779043 0.9256285729937762 1.166184465786116 1.1415020065659043 1.2571097104276594 1.2807449051794655 1.3554846128598523 1.4698475655854906 1.3467403711602717 1.0 13.540311167770811 -5.770082969598878 1.4103937231611794 1.3274787782859567 1.0818930277070586 0.2708744683330463 0.13389737747787656 0.43333554802117974 1.8000832902240134 0.04932212401993875 0.06813343707654577 1.6979192432370535e-06 5.770082969598878 -0.2455857505788981 DSAAPS(ph)PIPGADNLSADPVVS(ph)PPTSIPFK ddPTM_KYSE-520_SHP099_60min_R1 3 DSAAPSPIPGADNLSADPVVSPPTSIPFK 29 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 2 DSAAPS(0.998)PIPGADNLS(0.001)ADPVVS(0.769)PPT(0.034)S(0.197)IPFK;DSAAPS(1)PIPGADNLSADPVVS(0.996)PPT(0.004)SIPFK;DSAAPS(1)PIPGADNLSADPVVS(0.984)PPT(0.016)SIPFK 246.34 2.4225000000000002e-31 1400954000.0 530193.0 476962.0 536882.0 506925.0 565070.0 559545.0 493984.0 517474.0 654590.0 519578.0 True False 500782.1373764576 454048.02958544216 571490.2727615723 555102.9995874414 609537.7941915022 556052.6721023208 543920.7235392493 515679.003473339 535732.956871054 514974.9431455671 0.97243981293067 0.8816895571889936 1.1097438435951827 1.0779223474384294 1.1836261206580785 1.079766461462849 1.0562081335780644 1.0013671739511663 1.040308783954988 1.0 18.974142712016032 -4.76351049375851 24.99951427067967 1.0730613930199258 0.9270646673734066 0.5187852308772947 0.05439795244507954 39.690664288508955 479115.41185298987 0.01493351223058348 0.033779572837417345 1.7238104384852944e-05 4.76351049375851 -0.1459967256465191 DSAAPS(ph)PIPGADNLSADPVVSPPTSIPFK ddPTM_KYSE-520_SHP099_60min_R1 1 DSAAPSPIPGADNLSADPVVSPPTSIPFK 29 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 DSAAPS(0.81)PIPGADNLS(0.19)ADPVVSPPTSIPFK 115.18 0.00022185 273720000.0 167560.0 266780.0 150700.0 133290.0 162790.0 239060.0 155310.0 215430.0 237110.0 215330.0 True False 158265.11277742116 253963.48835505595 160414.36312852538 145957.84152490008 175600.6468516017 237567.93786519577 171010.25047953118 214682.7236117401 194056.80105668542 213422.34372420475 0.7415583111669856 1.1899573583693774 0.7516287204484129 0.6838920376280483 0.8227847365340614 1.1131352684056042 0.8012762276686426 1.005905566706568 0.9092618779758859 1.0 17.70335169789369 DSAAPSPIPGADNLS(ph)ADPVVSPPTSIPFK ddPTM_KYSE-520_SHP099_60min_R1 2 DSAAPSPIPGADNLSADPVVSPPTSIPFK 29 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 DS(0.002)AAPS(0.463)PIPGADNLS(0.534)ADPVVS(0.001)PPTSIPFK;DS(0.001)AAPS(0.471)PIPGADNLS(0.527)ADPVVS(0.001)PPTSIPFK 122.37 0.00013811 747140000.0 386110.0 564420.0 341820.0 310620.0 333240.0 515610.0 355970.0 479670.0 510790.0 482490.0 True False 364691.7086087977 537304.4159883081 363854.2641313372 340141.23140869173 359464.0921237657 512391.886734182 391954.9215324108 478006.13672581955 418043.41196805 478215.51397153956 0.762609530544218 1.1235612402576407 0.7608583442004174 0.7112718460006607 0.7516780230286689 1.0714664659847828 0.819619836833101 0.9995621696921099 0.8741736722345845 1.0 18.867301408264584 -6.2455322721331195 24.9466843563236 0.9446030398467312 0.8292015837367597 0.2106184529006826 0.12587096753039695 1553.1743102950556 2435802.2918105614 0.042722974110131616 0.042585020291842315 5.681561706853434e-07 6.2455322721331195 -0.11540145610997155 DSALAEAPEGLS(ph)PAPPAR ddPTM_KYSE-520_SHP099_60min_R1 2 DSALAEAPEGLSPAPPAR 18 0 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 DSALAEAPEGLS(1)PAPPAR;DSALAEAPEGLS(1)PAPPAR 227.09 1.3211e-15 0.0 592460.0 639450.0 557140.0 398190.0 440990.0 667690.0 456310.0 586310.0 629900.0 659230.0 True False 559595.0627602704 608729.8621659812 593054.1358555191 436033.8578798116 475693.40411012823 663522.69904297 502438.2679564407 584276.2274557832 515526.03848680406 653389.735073179 0.8564491186835012 0.9316489523634834 0.9076575648821567 0.6673411510374834 0.728039298102611 1.0155082999102458 0.7689717805257043 0.8942231505830817 0.7890023531347117 1.0 19.317584264267353 -9.896740142126442 6.92719476288462 1.000000003623999 0.8408798591000727 0.1921367489603497 0.09848452365884154 5.651215406465369e-09 8.388337403813447e-10 0.09748845381829348 0.023644422728316204 1.2684105858090545e-10 9.896740142126442 -0.15912014452392642 DSASFNPELLTHILDGS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 6 DSASFNPELLTHILDGSPEK 20 0 Q15067-2;Q15067;I3L2U4;K7ELT1;I3L0T4 Q15067-2 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 1 DSASFNPELLTHILDGS(1)PEK;DSASFNPELLTHILDGS(1)PEK;DSASFNPELLTHILDGS(1)PEK;DSASFNPELLTHILDGS(1)PEK;DSASFNPELLTHILDGS(1)PEK;DSASFNPELLTHILDGS(1)PEK 260.8 2.0964000000000004e-35 1002924000.0 1741285.0 1929960.0 1529520.0 1711640.0 1639640.0 1727128.0 1472840.0 1575252.0 2185170.0 1595218.0 True False 1644692.449884411 1837241.8246709793 1628115.3065185277 1874313.7509766675 1768670.3397245535 1716348.3535063975 1621729.0407331975 1569787.8184785815 1788398.2116529741 1581085.6095808235 1.040229852145989 1.1620128685872158 1.0297451932094763 1.1854600026835893 1.11864299378037 1.0855505502712373 1.0257060281278187 0.9928544089998788 1.1311204155017978 1.0 20.59248405541002 -6.604192775811989 4.0789274916016565 1.037162862818001 1.1097811742695378 0.2519527056462735 0.056683751998716565 0.3016132553198619 9.638832636474277 0.021559788031228967 0.01647204526466789 2.487752802704539e-07 6.604192775811989 0.07261831145153685 DSAYISSS(ph)PLGSHQVFDFR ddPTM_KYSE-520_SHP099_60min_R1 1 DSAYISSSPLGSHQVFDFR 19 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 DSAYIS(0.013)S(0.115)S(0.872)PLGSHQVFDFR 156.74 2.1254000000000002e-07 589270000.0 257830.0 427310.0 372830.0 533950.0 311700.0 355340.0 320620.0 362020.0 459320.0 310940.0 True False 243527.65592863745 406781.3861946133 396863.218349092 584696.4474620781 336229.01666960056 353122.1912533195 353031.3985496573 360764.237116103 375919.06651493645 308185.3135076593 0.7901987708528008 1.3199246309461259 1.2877421504358246 1.8972235918943188 1.0909962348392188 1.145811223884111 1.145516619632439 1.170608141608075 1.219782546534599 1.0 18.23343858666421 DSCIS(ph)PSEPETK ddPTM_KYSE-520_SHP099_60min_R1 2 DSCISPSEPETK 12 0 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 DSCIS(0.682)PS(0.317)EPETK;DSCIS(0.769)PS(0.231)EPETK 123.95 0.00029168 347070000.0 1064030.0 1046130.0 994550.0 807860.0 827420.0 1063550.0 902420.0 1186000.0 1352400.0 1124300.0 True False 1005006.1348087827 995872.3445268564 1058660.2843362621 884638.7715080348 892533.2466241922 1056911.9899461593 993645.4203704742 1181886.0428144825 1106838.2512296443 1114339.576692165 0.9018849871527217 0.8936883920815503 0.9500338195640661 0.7938682157677822 0.8009526586802305 0.9484649132569846 0.8916899670027313 1.0606156933982585 0.9932683666456611 1.0 20.087757506631256 -7.215474686803219 7.739025172336606 1.0200795975077686 0.8816116897176562 0.5883005763487048 0.051745602717616634 0.20243667819153877 30.974945290237134 0.02616911832246985 0.014941532574813754 6.088710332560927e-08 7.215474686803219 -0.1384679077901123 DSDAGS(ph)STPTTSTR ddPTM_KYSE-520_SHP099_60min_R1 1 DSDAGSSTPTTSTR 14 0 P51532-5;A0A2R8YF58;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4P4;A0A2R8Y7F3;Q9HBD4;A0A2R8YF80;A0A2R8Y6N0;A0A2R8Y526;A0A2R8Y7Y7;A0A2R8Y7S2;A0A2R8YGG3;A0A0A0MT49;A0A2R8YDA1;A0A2R8Y6V2;A0A2R8Y4C5;P51532-2;P51532-3;P51532-4;P51532;K7EP28;A0A2R8Y5K3;K7EQF0;A0A2R8Y523;A0A2R8YFK5 P51532-5 SMARCA4 Transcription activator BRG1 1 DSDAGS(0.62)S(0.19)T(0.19)PTTSTR 229.48 9.2978e-19 382560000.0 344770.0 371130.0 305140.0 232150.0 243690.0 318990.0 249440.0 319030.0 392450.0 357340.0 True False 325644.9208180444 353300.35772251314 324809.81264126237 254213.4662015574 262867.01659356756 316999.0650866674 274655.8294998023 317923.35939216183 321190.9728594157 354174.24560631363 0.9194483361165077 0.9975326046581833 0.9170904340749507 0.71776383900068 0.7421968701975026 0.8950370305553818 0.7754822178829431 0.8976467468658156 0.9068727521662858 1.0 18.434099782272146 -10.13375741434955 13.793336036230722 0.99999268946217 0.8602930121106386 0.1892591622501505 0.08472677295713592 0.0 0.0 0.090375517749443 0.021919282685343367 7.349242631891437e-11 10.13375741434955 -0.13969967735153144 DSDAGSS(ph)TPTTSTR ddPTM_KYSE-520_SHP099_60min_R1 1 DSDAGSSTPTTSTR 14 0 P51532-5;A0A2R8YF58;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4P4;A0A2R8Y7F3;Q9HBD4;A0A2R8YF80;A0A2R8Y6N0;A0A2R8Y526;A0A2R8Y7Y7;A0A2R8Y7S2;A0A2R8YGG3;A0A0A0MT49;A0A2R8YDA1;A0A2R8Y6V2;A0A2R8Y4C5;P51532-2;P51532-3;P51532-4;P51532;K7EP28;A0A2R8Y5K3;K7EQF0;A0A2R8Y523;A0A2R8YFK5 P51532-5 SMARCA4 Transcription activator BRG1 1 DSDAGS(0.139)S(0.429)T(0.429)PT(0.002)T(0.001)STR 87.363 0.007437 455420000.0 414250.0 469100.0 367370.0 342970.0 300270.0 414600.0 357150.0 451210.0 496450.0 485620.0 True False 391270.7267130982 446563.731866545 391051.2580127832 375565.7656823095 323899.5406974041 412012.32761193893 393254.20744810096 449644.8578232053 406307.1944860671 481317.78460664325 0.8129155814029685 0.9277939568169064 0.8124596067697138 0.7802864919883242 0.6729432218302734 0.8560089420935397 0.8170365193745911 0.9341953948173292 0.8441557895437449 1.0 18.87663020604996 -7.971916754888208 0.8153048725049336 0.9930543116904846 0.8094026934062604 0.4079567249351027 0.0669075715090647 0.6992041801885239 1.0610285900716774 0.06858902491688894 0.02533517015642669 1.066800584853618e-08 7.971916754888208 -0.18365161828422427 DSDAGSST(ph)PTTSTR ddPTM_KYSE-520_SHP099_60min_R1 1 DSDAGSSTPTTSTR 14 0 P51532-5;A0A2R8YF58;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4P4;A0A2R8Y7F3;Q9HBD4;A0A2R8YF80;A0A2R8Y6N0;A0A2R8Y526;A0A2R8Y7Y7;A0A2R8Y7S2;A0A2R8YGG3;A0A0A0MT49;A0A2R8YDA1;A0A2R8Y6V2;A0A2R8Y4C5;P51532-2;P51532-3;P51532-4;P51532;K7EP28;A0A2R8Y5K3;K7EQF0;A0A2R8Y523;A0A2R8YFK5 P51532-5 SMARCA4 Transcription activator BRG1 1 DSDAGS(0.009)S(0.288)T(0.702)PT(0.001)TSTR 286.28 5.201199999999999e-32 469410000.0 621890.0 685950.0 510970.0 444130.0 431080.0 599660.0 519020.0 576980.0 660050.0 667920.0 True False 587392.5219930209 652995.9323680586 543907.9437809064 486339.98166744615 465003.5434903155 595917.2995074178 571487.6067470621 574978.5910481438 540201.5585064531 662002.7484338962 0.8872961983656696 0.9863945941506359 0.8216097970403183 0.734649490229434 0.7024193548899564 0.9001734523265694 0.8632707463813913 0.8685441146707835 0.8160110509879469 1.0 19.336477681112388 -8.953332045631093 12.795027786677917 1.0001101627425852 0.841710822186211 0.27327271206491477 0.07716407109553386 0.0 0.0 0.08259572686920222 0.020032406241552204 1.1134429104646685e-09 8.953332045631093 -0.15839934055637428 DSDKEGTSNS(ph)TSEDGPGDGFTILSSK ddPTM_KYSE-520_SHP099_60min_R1 1 DSDKEGTSNSTSEDGPGDGFTILSSK 26 1 Q9P0M6;Q5SQT3 Q9P0M6 H2AFY2 Core histone macro-H2A.2;Histone H2A 1 DS(0.002)DKEGT(0.055)S(0.172)NS(0.544)T(0.172)S(0.055)EDGPGDGFTILSSK 67.655 0.017859 145910000.0 151770.0 155840.0 137780.0 125550.0 140950.0 129090.0 131650.0 117750.0 193540.0 131860.0 True False 143351.01555400566 148353.21247939093 146661.51925579453 137482.23425201606 152041.96310420334 128284.30142649579 144958.46678018352 117341.55273305667 158398.01474636607 130691.82298552772 1.096862927452468 1.1351376780153948 1.122193538244816 1.0519574301694474 1.1633624784699794 0.981578636642795 1.1091624821564823 0.8978492307514189 1.2119963676985852 1.0 16.995809353081473 -6.258991136807964 24.99593732285628 1.038048242518679 1.1121017098577421 0.16905046978485516 0.081680573055319 400.3957249142245 4087965.5808158084 0.025506738421950084 0.024334058540548573 5.508189375434044e-07 6.258991136807964 0.07405346733906315 DSDKPET(ph)PPVVNVPVPVLIGPISGMSR ddPTM_KYSE-520_SHP099_60min_R1 2 DSDKPETPPVVNVPVPVLIGPISGMSR 27 1 A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;Q7Z3U7-3 A0A286YFF8 MON2 Protein MON2 homolog 1 DS(0.002)DKPET(0.998)PPVVNVPVPVLIGPISGMSR;DS(0.002)DKPET(0.998)PPVVNVPVPVLIGPISGMSR 155.92 8.656299999999999e-07 584280000.0 404690.0 517190.0 370000.0 382890.0 405850.0 594950.0 446700.0 581410.0 629370.0 603310.0 True False 382241.0389704854 492343.41608198325 393850.79202093167 419279.750479924 437788.0860293785 591236.6963645025 491856.7953718795 579393.2244121139 515092.2731265916 597965.1427680769 0.6392363227077588 0.823364742972887 0.6586517571872718 0.7011775779086563 0.732129775997957 0.9887477614958837 0.8225509485302024 0.9689414699492506 0.8614085274973498 1.0 19.18970186216899 -6.193710918684238 6.619542771531129 0.9195219656278608 0.7124028308185398 0.7129980265360477 0.06888588924948287 0.13523329339380508 10.96195792095217 0.02140197450092024 0.021361411132978913 6.401608067049841e-07 6.193710918684238 -0.20711913480932098 DSDKTDTDWR ddPTM_KYSE-520_SHP099_60min_R1 4 DSDKTDTDWR 10 1 E7EX17;P23588-2;P23588;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ;;; 101.95 0.0020254 9645100000.0 25258000.0 25432000.0 16776600.0 15427200.0 24660300.0 25450200.0 18516000.0 21436900.0 21664900.0 21770000.0 False True 23856888.389425326 24210208.545789745 17858046.479509097 16893396.4496432 26600925.312086467 25291355.86152764 20387777.97874571 21362540.39731009 17731100.28768494 21577134.736803733 1.1056559955911596 1.122030744169884 0.8276375291409265 0.7829304796817361 1.2328293648143072 1.172136901865317 0.9448788371317273 0.9900545488494534 0.8217541626340832 1.0 24.36299996390992 -6.957822271736166 24.999609307985615 0.9370352549283026 1.0338378336205845 0.11024415073013671 0.1404273834976866 387.6944477257105 229793.58476579096 0.06446893288992937 0.04346490467882403 1.1019901896274479e-07 6.957822271736166 0.09680257869228182 DSDQVAQS(ph)DGEES(ph)PAAEEQLLGEHIK ddPTM_KYSE-520_SHP099_60min_R1 5 DSDQVAQSDGEESPAAEEQLLGEHIK 26 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H0Y8V7 D6REX3 SEC31A Protein transport protein Sec31A 2 DSDQVAQS(1)DGEES(1)PAAEEQLLGEHIK;DSDQVAQS(1)DGEES(1)PAAEEQLLGEHIK;DSDQVAQS(1)DGEES(1)PAAEEQLLGEHIK;DSDQVAQS(1)DGEES(1)PAAEEQLLGEHIK;DSDQVAQS(1)DGEES(1)PAAEEQLLGEHIK 222.95 6.0051e-22 1501570000.0 1451710.0 1218560.0 1203320.0 1343130.0 1318820.0 1370430.0 1314120.0 1482760.0 1569100.0 1389450.0 True False 1371180.7523878613 1160018.5485041505 1280887.9325800724 1470780.6713732397 1422603.6309406552 1361876.638034802 1446964.0741752707 1477616.6516387851 1284190.9937921 1377140.5539757416 0.9956723360076248 0.8423385290304829 0.9301069007678321 1.0679960495877951 1.0330126629657836 0.9889162250745769 1.0507018110809037 1.0729599439744721 0.9325053932110994 1.0 20.39324438092161 -5.150832175290668 5.9376100571740436 1.0240810500503712 0.9118076526454292 0.423729518966122 0.052214553790965644 0.1930456459521362 8.920223657438637 0.013622264777668671 0.023969073298754383 7.065905497749975e-06 5.150832175290668 -0.11227339740494202 DSDQVAQS(ph)DGEES(ph)PAAEEQLLGEHIKEEK ddPTM_KYSE-520_SHP099_60min_R1 1 DSDQVAQSDGEESPAAEEQLLGEHIKEEK 29 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H0Y8V7 D6REX3 SEC31A Protein transport protein Sec31A 2 DSDQVAQS(1)DGEES(1)PAAEEQLLGEHIKEEK 159.22 8.652600000000001e-10 342430000.0 622130.0 619430.0 584070.0 588030.0 495650.0 553690.0 509690.0 538960.0 782320.0 511280.0 True False 587619.2087145913 589671.6530166145 621720.0867450413 643916.1944023339 534654.8351372709 550234.215329123 561214.4392950366 537090.4735542093 640270.4086823253 506750.4569698205 1.1595829873116168 1.1636331944180809 1.2268762231862533 1.2706770868105648 1.0550653241327264 1.0858090165706396 1.1074769278964058 1.059871710359791 1.2634826468848286 1.0 18.95091595910145 -5.769340658362688 24.999979345149953 1.0984137252224562 1.2037727100878448 0.37065227825947655 0.07008031602189849 202.23865005394563 639890.11557769 0.02130933879797107 0.024597003033149285 1.7008238675080675e-06 5.769340658362688 0.10535898486538864 DSDQVAQS(ph)DGEESPAAEEQLLGEHIK ddPTM_KYSE-520_SHP099_60min_R1 8 DSDQVAQSDGEESPAAEEQLLGEHIK 26 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H0Y8V7 D6REX3 SEC31A Protein transport protein Sec31A 1 DS(0.003)DQVAQS(0.996)DGEES(0.001)PAAEEQLLGEHIK;DSDQVAQS(0.999)DGEES(0.001)PAAEEQLLGEHIK;DSDQVAQS(1)DGEESPAAEEQLLGEHIK;DSDQVAQS(1)DGEESPAAEEQLLGEHIK;DSDQVAQS(1)DGEESPAAEEQLLGEHIK;DSDQVAQS(1)DGEESPAAEEQLLGEHIK;DSDQVAQS(1)DGEESPAAEEQLLGEHIK;DSDQVAQS(1)DGEESPAAEEQLLGEHIK 285.92 4.7856999999999995e-49 16611300000.0 7363330.0 7239000.0 6111790.0 6086900.0 6581970.0 7370620.0 6690740.0 7276420.0 8341080.0 7577300.0 True False 6954871.406465549 6891227.57403948 6505765.762609762 6665397.145906775 7099933.592713543 7324617.226587324 7367105.294529759 7251179.797349202 6826550.133515645 7510171.0170501955 0.9260603241492157 0.917585972196167 0.866260668077977 0.8875160273680125 0.9453757546392355 0.9752930006465084 0.9809504041658124 0.9655146042462934 0.9089739924720037 1.0 22.840414329612464 -5.897008486144588 4.318206264220844 0.9645388650384695 0.8985196207403963 0.584436205648052 0.02656656863415395 0.16445473322300483 5.479591789962124 0.00875151760046967 0.010019746967447863 1.2676270960936208e-06 5.897008486144588 -0.06601924429807327 DSDQVAQS(ph)DGEESPAAEEQLLGEHIKEEK ddPTM_KYSE-520_SHP099_60min_R1 2 DSDQVAQSDGEESPAAEEQLLGEHIKEEK 29 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;D6RHZ5;H0Y8V7 D6REX3 SEC31A Protein transport protein Sec31A 1 DS(0.009)DQVAQS(0.991)DGEESPAAEEQLLGEHIKEEK;DSDQVAQS(1)DGEESPAAEEQLLGEHIKEEK 249.63 1.5952e-31 2435700000.0 1231370.0 1330410.0 1156960.0 1090180.0 1190170.0 1013470.0 1072760.0 1101800.0 1626220.0 1079940.0 True False 1163063.451424762 1266495.1066138786 1231539.4928014507 1193790.3794254307 1283829.6078590255 1007144.5578023925 1181205.04992867 1097978.1129620536 1330939.4416701237 1070372.5717806057 1.086596837482449 1.1832282889190775 1.150570862211779 1.1153035969891443 1.1994231183664636 0.9409289665625205 1.103545700880293 1.0257905909673348 1.2434356753518592 1.0 20.029681621934223 -6.206569702377882 24.999571056983108 1.0669013899743973 1.1474705830372929 0.21832976724912345 0.07954230406849437 497.36844166083137 226609.43596836342 0.025124481401008942 0.025124473488537188 6.214844941859812e-07 6.206569702377882 0.08056919306289556 DSEDVSKRDS(ph)DKEMATK ddPTM_KYSE-520_SHP099_60min_R1 5 DSEDVSKRDSDKEMATK 17 3 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 DSEDVSKRDS(1)DKEMATK;DSEDVS(0.054)KRDS(0.946)DKEMATK;DS(0.005)EDVS(0.022)KRDS(0.972)DKEMAT(0.001)K;DS(0.038)EDVS(0.363)KRDS(0.598)DKEMAT(0.001)K;DS(0.004)EDVS(0.056)KRDS(0.939)DKEMAT(0.001)K 196.61 5.3901e-10 6159200000.0 4265900.0 4171760.0 3828890.0 3662150.0 3782100.0 3847330.0 3081660.0 3307070.0 5114760.0 3555110.0 True False 4029262.023139176 3971342.3876605765 4075706.375840602 4010199.6349344496 4079729.7527946588 3823317.386375397 3393184.2669033026 3295598.5460459418 4186048.5166070224 3523614.491233727 1.1435025123104219 1.1270649492277705 1.1566833959788747 1.1380926162357659 1.1578252283115735 1.0850555291696324 0.9629839686904124 0.9352891907570883 1.1879984393926581 1.0 21.748624661003387 -6.5275669230369635 4.842426815965906 1.0161891943954562 1.1426066238403918 0.45571205060742415 0.06320219577715837 0.16641795699525874 10.869423038691126 0.023674539507680496 0.01905168094264348 2.9677893837903374e-07 6.5275669230369635 0.12641742944493561 DSELKT(ph)PPS(ph)VGPPSVTVVTLESAPSALEK ddPTM_KYSE-520_SHP099_60min_R1 6 DSELKTPPSVGPPSVTVVTLESAPSALEK 29 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 2 DS(0.322)ELKT(0.678)PPS(0.995)VGPPS(0.002)VT(0.001)VVTLESAPSALEK;DS(0.017)ELKT(0.983)PPS(1)VGPPSVTVVTLESAPSALEK;DS(0.04)ELKT(0.96)PPS(0.995)VGPPS(0.004)VT(0.001)VVTLESAPSALEK;DS(0.094)ELKT(0.906)PPS(0.999)VGPPS(0.001)VTVVTLESAPSALEK;DS(0.013)ELKT(0.987)PPS(1)VGPPSVTVVTLESAPSALEK;DS(0.031)ELKT(0.969)PPS(0.999)VGPPS(0.001)VTVVTLESAPSALEK 169.22 3.0456999999999996e-10 1747310000.0 1805084.0 1611146.0 1434732.0 1690868.0 1678055.0 1593078.0 1633608.0 1788498.0 1952604.0 1686576.0 True False 1704952.392174258 1533744.1277805509 1527217.120372364 1851567.586342 1810108.3816731016 1583135.00927972 1798749.039117675 1782294.1178765707 1598060.3347412094 1671634.2487762708 1.0199314792828502 0.91751178758352 0.9136072208919935 1.1076391786645017 1.0828375782550528 0.9470582517908226 1.0760422266021765 1.0661986132321164 0.9559868349856306 1.0 20.672827791624 -5.245892427927308 24.94746435097667 1.0366426994848967 0.9470663235427985 0.30653967930816006 0.057250405987753945 930.2286458379765 1492691.3568766427 0.015570927125428876 0.02684301321791377 5.676852001289815e-06 5.245892427927308 -0.08957637594209822 DSENLAS(ph)PSEYPENGER ddPTM_KYSE-520_SHP099_60min_R1 5 DSENLASPSEYPENGER 17 0 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 DSENLAS(0.999)PS(0.001)EYPENGER;DSENLAS(0.705)PS(0.295)EYPENGER;DSENLAS(0.996)PS(0.004)EYPENGER;DSENLAS(0.944)PS(0.056)EYPENGER;DSENLAS(0.952)PS(0.048)EYPENGER 432.26 6.1023999999999985e-118 3468470000.0 1670110.0 1552390.0 1394370.0 1320790.0 1525510.0 1907650.0 1771900.0 1980030.0 2285900.0 1946140.0 True False 1577465.6690182537 1477810.8542151027 1484253.3212708826 1446317.4844900062 1645558.9580354274 1895743.6487431626 1951020.9440775304 1973161.7380724777 1870838.1828496326 1928898.7136740084 0.8178063772014375 0.7661422778390938 0.7694822495079581 0.7498151531944252 0.8531080177357272 0.9828114018139943 1.0114688398342002 1.0229473036011107 0.969899647704266 1.0 20.879345958892287 -6.145084444033827 2.5643688849128314 1.0030287095532624 0.7750399669406305 0.9601066987523971 0.021458853698449173 0.05094125033144873 0.6537089243815788 0.007849393723716043 0.007828859674251743 7.160041771303169e-07 6.145084444033827 -0.2279887426126319 DSENLASPS(ph)EYPENGER ddPTM_KYSE-520_SHP099_60min_R1 1 DSENLASPSEYPENGER 17 0 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 DSENLAS(0.246)PS(0.754)EYPENGER 125.59 2.7281999999999997e-05 1123800000.0 560320.0 558160.0 541820.0 493070.0 465020.0 607130.0 593690.0 704480.0 782480.0 686590.0 True False 529237.9326297726 531345.1557847591 576746.5841426518 539931.2245530988 501614.4283981315 603340.6764665614 653705.9790560358 702036.3233068681 640401.3567155959 680507.3467589366 0.7777108287667762 0.780807376019385 0.8475244049745121 0.793424534098916 0.7371183144269914 0.8866042069054828 0.9606156085888738 1.0316366555783238 0.9410645744908499 1.0 19.376251211589256 -6.597582689631877 2.721843840662347 0.9885819942835564 0.790975245846742 0.8786181093074754 0.034267889667872746 0.08895414941564923 1.336861844439008 0.014607278240908876 0.010955791118475201 2.5259067319204595e-07 6.597582689631877 -0.19760674843681447 DSENT(ph)PVKGGTVADLDEQDEETVTAGGK ddPTM_KYSE-520_SHP099_60min_R1 2 DSENTPVKGGTVADLDEQDEETVTAGGK 28 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 DS(0.093)ENT(0.801)PVKGGT(0.106)VADLDEQDEETVTAGGK;DS(0.123)ENT(0.877)PVKGGTVADLDEQDEETVTAGGK 191.99 6.0339e-15 139120000.0 323290.0 352040.0 225375.0 211526.0 256240.0 256110.0 252990.0 280850.0 342280.0 328360.0 True False 305356.4592373623 335127.46997718693 239903.03311274963 231629.36744238934 276404.630193835 254511.52249081896 278564.69814446295 279875.7969008827 280130.580176636 325450.9858602146 0.9382563657942546 1.029732538960962 0.7371402869733235 0.7117181311654626 0.8492972588890985 0.782027197791728 0.8559344117768629 0.85996297157045 0.8607458337734324 1.0 18.31208075890018 -9.568207139553893 10.582900424977236 1.0000044375952706 0.8441252290357238 0.21405831360055083 0.08765706622057944 0.0 0.0 0.09189184944004707 0.022287047139686423 2.7026690012387643e-10 9.568207139553893 -0.15587920855954673 DSENT(ph)PVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSR ddPTM_KYSE-520_SHP099_60min_R1 1 DSENTPVKGGTVADLDEQDEETVTAGGKEDEDPAKGDQSR 40 3 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 DS(0.065)ENT(0.915)PVKGGT(0.02)VADLDEQDEETVTAGGKEDEDPAKGDQSR 90.514 0.00047957 718690000.0 235580.0 226650.0 219970.0 127020.0 201280.0 165560.0 156940.0 158270.0 290960.0 160740.0 True False 222511.90778291298 215761.3937914141 234149.61816444405 139091.9426100445 217119.5908734588 164526.6786286364 172805.02678679832 157720.99831049587 238128.99850471574 159315.96865382776 1.3966704635013802 1.3542986030498592 1.4697184478300462 0.8730571315940879 1.3628237816212294 1.032706765171361 1.0846685881330607 0.9899886348066116 1.4946963604266068 1.0 17.281531353623162 -5.233849990216315 24.994880873393935 1.1243337821106776 1.4016361511877038 0.35995575472880714 0.17537473680642798 804.7977955017858 729113.7666126859 0.04496367817930047 0.07785805485337556 5.836466670263325e-06 5.233849990216315 0.2773023690770262 DSFDDRGPSLNPVLDYDHGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 DSFDDRGPSLNPVLDYDHGSR 21 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 DSFDDRGPSLNPVLDYDHGS(1)R;DSFDDRGPSLNPVLDYDHGS(1)R;DSFDDRGPSLNPVLDYDHGS(1)R 226.89 1.1214e-19 1216990000.0 1173050.0 1028650.0 1004240.0 972260.0 918040.0 912070.0 842380.0 953910.0 1145690.0 854740.0 True False 1107978.5780828004 979232.1099648717 1068974.9172408115 1064663.2980793712 990284.5250669243 906377.4328148129 927535.991236543 950601.1088542682 937661.5764945971 847167.6685776565 1.3078622086027312 1.1558893785558926 1.261822136148746 1.256732684176766 1.168935692186592 1.0698914352297768 1.0948670796110764 1.1220932338580274 1.106819359701102 1.0 19.692288005607548 -6.022867580801864 3.264889092223414 1.0878361495456175 1.2398120248800595 0.7328770929749826 0.047258573927932236 0.13695600379822429 3.0063159106210744 0.015484254987689438 0.016531112453875837 9.487076863189379e-07 6.022867580801864 0.151975875334442 DSFEMEEVQS(ph)TEGEAPHVPATYQLGLTK ddPTM_KYSE-520_SHP099_60min_R1 1 DSFEMEEVQSTEGEAPHVPATYQLGLTK 28 0 P28290-3;P28290;E9PHV5;P28290-2 P28290-3 SSFA2 Sperm-specific antigen 2 1 DSFEMEEVQS(0.964)T(0.036)EGEAPHVPATYQLGLTK 170.19 2.1678e-10 171490000.0 349460.0 298060.0 290080.0 297220.0 261970.0 287430.0 251700.0 315670.0 335930.0 291220.0 True False 330074.75716876134 283740.75020281883 308779.02094441064 325467.69943754835 282585.5485945949 285636.04275325517 277144.29235527664 314575.0144479316 274933.580106163 288640.01736573136 1.1435516120778522 0.9830263758725294 1.069772042568725 1.1275903542686987 0.9790241532466895 0.9895926606438985 0.9601727954586122 1.089852395793541 0.9525137318634472 1.0 18.138911804941017 -5.779322629529325 24.99932932958838 0.9976542429407209 1.0731871248037732 0.37961232494060015 0.05330300516433814 289.854001877597 405190.68449370266 0.016256118152524947 0.018470273173857094 1.6621773900285957e-06 5.779322629529325 0.07553288186305229 DSFIENSSSNCTSGSS(ph)KPNS(ph)PSIS(ph)PSILSNTEHK ddPTM_KYSE-520_SHP099_60min_R1 1 DSFIENSSSNCTSGSSKPNSPSISPSILSNTEHK 34 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 3 DSFIENS(0.001)S(0.001)S(0.001)NCT(0.013)S(0.038)GS(0.327)S(0.774)KPNS(0.776)PS(0.082)IS(0.96)PS(0.029)ILSNTEHK 105.05 0.00090058 2310300000.0 323170.0 402250.0 269810.0 437790.0 278100.0 337890.0 258180.0 311270.0 399970.0 317990.0 True False 305243.1158765769 382925.30621044047 287202.38431126333 479397.42997363704 299984.88782744884 335781.1031760686 284279.3539939819 310190.2770209639 327345.5304231893 315172.85599247634 0.968494304229878 1.2149691793876485 0.9112535513468181 1.5210619216049526 0.951810671901929 1.0653871258002123 0.9019791793261793 0.9841909641748102 1.0386222169811588 1.0 18.26578376363678 DSFIENSSSNCTSGSS(ph)KPNS(ph)PSISPSILSNTEHK ddPTM_KYSE-520_SHP099_60min_R1 2 DSFIENSSSNCTSGSSKPNSPSISPSILSNTEHK 34 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 2 DSFIENS(0.003)S(0.004)S(0.005)NCT(0.026)S(0.167)GS(0.37)S(0.426)KPNS(0.995)PS(0.005)ISPSILSNTEHK;DSFIENSSSNCT(0.007)S(0.04)GS(0.187)S(0.766)KPNS(0.974)PS(0.025)IS(0.001)PSILSNTEHK 162.31 6.8952e-10 1662120000.0 460420.0 691980.0 544450.0 1171750.0 506190.0 505800.0 483520.0 416400.0 698840.0 437650.0 True False 434879.58477548463 658736.2421168436 579546.118150801 1283112.7677005152 546024.2731728746 502643.1145830167 532398.9203004495 414955.60558849014 571948.2723227775 433772.7614865476 1.0025516200813163 1.5186205788010796 1.336059267909505 2.958029829497046 1.2587795307885146 1.1587705803851056 1.2273682618426942 0.9566197844383527 1.3185435396236034 1.0 18.726579937078014 -5.975901032188257 24.999147872516737 1.1436350445417336 1.7198294000004275 0.240862916581568 0.4825796589805417 344.50415540736776 357370.8561018549 0.15348613680028403 0.17402957060496047 1.0570583661408042e-06 5.975901032188257 0.5761943554586939 DSFIENSSSNCTSGSSKPNS(ph)PSIS(ph)PSILSNTEHK ddPTM_KYSE-520_SHP099_60min_R1 1 DSFIENSSSNCTSGSSKPNSPSISPSILSNTEHK 34 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 2 DSFIENS(0.001)S(0.004)S(0.004)NCT(0.02)S(0.018)GS(0.014)S(0.087)KPNS(0.852)PS(0.001)IS(0.849)PS(0.146)ILS(0.004)NTEHK 136.77 2.7239e-06 761200000.0 264850.0 340790.0 269840.0 455020.0 275150.0 283170.0 276980.0 287760.0 393300.0 242960.0 True False 250158.24253461463 324417.93686378107 287234.3181592654 498264.9639932483 296802.73961065325 281402.63099342183 304979.8414643007 286761.8277236887 321886.6342861725 240807.56342001955 1.0388305042490942 1.3472082531640721 1.1927960819829722 2.0691416702895182 1.2325308034156977 1.1685788726768347 1.2664878010179068 1.1908339740289433 1.3366965294388775 1.0 17.877521180227085 -5.964224358455664 24.999935279526305 1.2081218102528415 1.4241001106952742 0.1357378599520619 0.26249579872293693 376.1195287461378 262829.9034055606 0.08281055556400094 0.09389807876568239 1.0858645162688166e-06 5.964224358455664 0.2159783004424327 DSFPWEVPKK ddPTM_KYSE-520_SHP099_60min_R1 2 DSFPWEVPKK 10 1 P31153 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 0 ; 94.616 0.007259000000000001 780890000.0 1338420.0 1059650.0 802210.0 810020.0 1357470.0 1105480.0 964750.0 937140.0 1041700.0 1086660.0 False True 1264175.1745258775 1008742.8234329242 853921.7401813815 887004.0572586075 1464295.166052239 1098580.2892630144 1062276.3450526542 933889.28007012 852553.5391200243 1077033.0378086863 1.1737570995017457 0.9365941322332096 0.7928463753709512 0.8235625334792807 1.3595638338369544 1.0200061193091792 0.9862987557131434 0.8670943669195105 0.7915760326671276 1.0 20.03863107431466 -7.203085284841268 4.33124114926636 0.8713405436756254 1.0096583772983423 0.11440821069240059 0.1610965269137563 0.5083903502047508 19.696389614751133 0.08771074287470224 0.04730779591208394 6.264908250774674e-08 7.203085284841268 0.13831783362271688 DSGPLPT(ph)PPGVSLLGEPPKDYR ddPTM_KYSE-520_SHP099_60min_R1 7 DSGPLPTPPGVSLLGEPPKDYR 22 1 A0A087WZ13;Q8IY67-2;E9PAU2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 DS(0.002)GPLPT(0.998)PPGVS(0.001)LLGEPPKDYR;DS(0.004)GPLPT(0.945)PPGVS(0.051)LLGEPPKDYR;DS(0.001)GPLPT(0.957)PPGVS(0.041)LLGEPPKDYR;DS(0.001)GPLPT(0.992)PPGVS(0.007)LLGEPPKDYR;DS(0.017)GPLPT(0.982)PPGVS(0.001)LLGEPPKDYR;DSGPLPT(1)PPGVSLLGEPPKDYR;DSGPLPT(1)PPGVSLLGEPPKDYR 238.44 1.9062e-26 3119370000.0 3028120.0 3288640.0 2479190.0 2253940.0 2226930.0 3327500.0 2722220.0 3878010.0 4684450.0 3900910.0 True False 2860144.1471924395 3130648.7980507235 2639002.5542442524 2468153.77992823 2402176.7215015492 3306731.8382265433 2997408.5639069537 3864558.0884443372 3833871.9653746714 3866350.9722620593 0.7397528490588827 0.8097166606214997 0.6825563879681283 0.6383677523419982 0.6213033267634583 0.8552590962252701 0.7752551657650677 0.9995362852905532 0.9915995709855627 1.0 21.882541175046942 -7.070845037528854 1.4115324169536738 1.0134581372693279 0.7079014627659437 0.775321385546865 0.06610271594735678 0.2134728293313245 0.7985560282641426 0.05190365014786974 0.02308216633441168 8.494835288164786e-08 7.070845037528854 -0.3055566745033842 DSGRGDS(ph)VSDSGSDALR ddPTM_KYSE-520_SHP099_60min_R1 3 DSGRGDSVSDSGSDALR 17 1 Q5VZS7;Q53EL6-2;Q53EL6 Q5VZS7 PDCD4 Programmed cell death protein 4 1 DS(0.007)GRGDS(0.974)VS(0.018)DS(0.001)GSDALR;DS(0.007)GRGDS(0.672)VS(0.221)DS(0.05)GS(0.05)DALR;DS(0.069)GRGDS(0.457)VS(0.457)DS(0.009)GS(0.009)DALR 87.429 0.0030046 299009000.0 803489.0 627370.0 657526.0 516398.0 740236.0 820058.0 592837.0 623475.0 849414.0 707725.0 True False 758917.8634543889 597230.2034984321 699911.1780387982 565476.3106592793 798488.3618332965 814939.713836931 652766.749491558 621312.3107451588 695181.8295844258 701455.1071017181 1.0819193641487568 0.8514161454552325 0.9977989624035968 0.8061475423505322 1.1383313825064325 1.161784561244568 0.9305894887395839 0.8857477897798843 0.9910567654953539 1.0 19.419991249223962 -3.925441561530176 18.70413193095889 0.9747750154774873 3.739985840338915 0.08283198339828624 0.1080211072339451 488.3470283045638 129882.39269233977 0.027235564870141428 3364.2829818901155 0.00011872944521019108 3.925441561530176 2.7652108248614273 DSGRLS(ph)PDLSVCGQPR ddPTM_KYSE-520_SHP099_60min_R1 5 DSGRLSPDLSVCGQPR 16 1 Q8TF76-2;Q8TF76 Q8TF76-2 GSG2 Serine/threonine-protein kinase haspin 1 DS(0.026)GRLS(0.974)PDLSVCGQPR;DS(0.037)GRLS(0.963)PDLSVCGQPR;DSGRLS(1)PDLSVCGQPR;DS(0.03)GRLS(0.97)PDLSVCGQPR;DS(0.04)GRLS(0.96)PDLSVCGQPR 195.66 4.0169e-12 2313770000.0 1350960.0 1243150.0 1173800.0 1014790.0 1155080.0 1169890.0 1122920.0 1269930.0 1431880.0 1155800.0 True False 1276019.5557280083 1183427.2079938073 1249465.0261464047 1111235.3364922616 1245978.2244938163 1162588.2825613387 1236435.7122430943 1265524.9092338907 1171886.6867573962 1145560.5111987928 1.113882281428062 1.033055169434383 1.0907019000147613 0.9700363495677666 1.0876581484027756 1.0148641396033518 1.0793281543453375 1.1047211359525293 1.022981043167291 1.0 20.12762223652259 -4.252499684222267 23.71606018187905 1.0486671235167748 1.1138823519026952 0.18799408499650117 0.04238727573829735 992.4745255830899 2632810.1074811593 0.009997290548365581 0.11303201236845817 5.5911393410500615e-05 4.252499684222267 0.06521522838592042 DSGS(ph)ISLQETR ddPTM_KYSE-520_SHP099_60min_R1 2 DSGSISLQETR 11 0 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 DSGS(0.999)IS(0.001)LQETR;DSGS(0.999)IS(0.001)LQETR 197.36 4.8445e-07 1048380000.0 582410.0 555820.0 481820.0 518570.0 438910.0 437350.0 392120.0 497930.0 444340.0 526100.0 True False 550102.5562944486 529117.5728971711 512878.88813925796 567854.7368862443 473449.71994370973 434620.33642325486 431759.3163224114 496202.79704773583 363659.056899867 521439.1632996062 1.054969774064272 1.0147254179164007 0.9835833674130271 1.089014360357833 0.9079673205744179 0.8335015223502357 0.8280147459394666 0.9516024724875333 0.6974141616035798 1.0 18.992139416681777 -5.921059555091731 5.120110560093634 0.8581561172000103 1.0295565092025958 0.5169344521201145 0.07931992217458574 0.16070689040699374 7.4652152927766195 0.023454579029064622 0.02666431354315623 1.1993348262882212e-06 5.921059555091731 0.1714003920025855 DSGSDTASAIIPSTTPSVDS(ph)DDESVVKDK ddPTM_KYSE-520_SHP099_60min_R1 2 DSGSDTASAIIPSTTPSVDSDDESVVKDK 29 1 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 DSGSDTASAIIPSTTPSVDS(0.991)DDES(0.009)VVKDK;DSGSDTASAIIPSTTPSVDS(0.999)DDES(0.001)VVKDK 205.09 2.4353e-16 2340820000.0 1488750.0 1715730.0 1437560.0 1511980.0 1501740.0 1585800.0 1539290.0 1468780.0 2062920.0 1412420.0 True False 1406166.069750451 1633303.7554367662 1530227.4177773248 1655678.1246066364 1619918.3942682259 1575902.4339773569 1694896.455222701 1463685.1449958277 1688345.7299812618 1399907.0576461316 1.0044710197510138 1.1667229952987583 1.0930921516677827 1.1827057486163188 1.1571613882653264 1.1257193292725818 1.210720701753285 1.0455588012085142 1.2060413016419278 1.0 20.41689961654865 -4.253157040242711 24.1145894916958 1.1368164183227112 1.0044709096125648 0.2522148197523565 0.06538327288080167 800.1501429210834 2329605.509307275 0.01465468964881434 0.15635964917240344 5.582682892464705e-05 4.253157040242711 -0.1323455087101464 DSGVGASLT(ph)RPNRR ddPTM_KYSE-520_SHP099_60min_R1 1 DSGVGASLTRPNRR 14 2 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 DS(0.038)GVGAS(0.153)LT(0.81)RPNRR 75.143 0.036697 631490000.0 413720.0 409870.0 282120.0 276820.0 249210.0 338810.0 240880.0 338430.0 382800.0 295800.0 True False 390770.1268696267 390179.2299725877 300305.90660795965 303128.88957103214 268821.4091890634 336695.36111481185 265230.50116225274 337256.0653201555 313293.1696027124 293179.44212891784 1.332870149530457 1.3308546709118056 1.0243075177007401 1.0339363748353791 0.9169176639297116 1.1484275932510952 0.9046695062801323 1.1503400882107422 1.0686055179303808 1.0 18.161424419046057 -4.760431440763816 24.999999910829835 1.0319965518658507 1.3318625289538293 0.7091144891758614 0.0771009870071311 12.58432958583729 312087.5098469919 0.01909620690175078 0.045005798664759754 1.736075304121088e-05 4.760431440763816 0.2998659770879786 DSHGVAQVR ddPTM_KYSE-520_SHP099_60min_R1 4 DSHGVAQVR 9 0 P62277;J3KMX5;E9PS50 P62277 RPS13 40S ribosomal protein S13 0 ;;; 177.7 6.7214e-05 3818810000.0 908720.0 878030.0 679060.0 652120.0 786340.0 840910.0 610850.0 781110.0 823070.0 796000.0 False True 858311.4901115919 835848.1208501 722833.2941344162 714097.2887329723 848220.48433742 835661.5687702734 672600.6793214964 778400.5117224444 673621.2359062284 788948.0592786284 1.0879188813727303 1.059446323518882 0.9161988367083835 0.9051258575702745 1.0751284249472481 1.059209866786867 0.8525284667491118 0.986630872042669 0.8538220330019588 1.0 19.589570797378 -6.752581477345325 24.997424252432253 0.9221312434193234 1.012044724601164 0.2780220965322404 0.0738650425571031 282.0374453194879 795925.2843070801 0.02974367111695707 0.022684971812501592 1.7677405434343843e-07 6.752581477345325 0.0899134811818405 DSHS(ph)PDLQLPTPEVIPSSGSK ddPTM_KYSE-520_SHP099_60min_R1 5 DSHSPDLQLPTPEVIPSSGSK 21 0 H3BQK9;H3BPE1;H0Y4F5;H0Y6T5 H3BQK9 MACF1 1 DS(0.177)HS(0.823)PDLQLPTPEVIPSSGSK;DS(0.24)HS(0.76)PDLQLPTPEVIPSSGSK;DS(0.172)HS(0.828)PDLQLPTPEVIPSSGSK;DS(0.08)HS(0.92)PDLQLPTPEVIPSSGSK;DS(0.183)HS(0.817)PDLQLPTPEVIPSSGSK 197.04 1.4177e-13 6904300000.0 4748360.0 4644430.0 4159920.0 4243490.0 4309530.0 4048500.0 3952180.0 3928730.0 4651070.0 3882410.0 True False 4484959.005179017 4421304.611368438 4428075.099307336 4646790.013748209 4648665.49312847 4023231.80978518 4351704.923959784 3915102.1526024705 3806552.9319333537 3848014.8678692696 1.1655253836538415 1.1489832454354865 1.1507427209498435 1.2075810965671343 1.2080684853753016 1.0455343723796295 1.1308960784679658 1.0174342581920295 0.9892251102556487 1.0 21.875682942694038 -6.986725864901243 1.0376199015255847 0.9890159788747729 1.1718022717778953 0.7692436267661029 0.038764492424353064 0.26094734367532124 0.5241781148282445 0.03184454492108672 0.015054174995015084 1.031036725457596e-07 6.986725864901243 0.18278629290312243 DSISAVSSEKVS(ph)PS(ph)KSPSLS(ph)PSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 1 DSISAVSSEKVSPSKSPSLSPSPPSPLEK 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 4 DS(0.024)IS(0.025)AVS(0.029)S(0.032)EKVS(0.867)PS(0.497)KS(0.497)PS(0.038)LS(0.983)PS(0.283)PPS(0.725)PLEK 85.751 0.015805 1799500000.0 682160.0 620890.0 614620.0 745960.0 703860.0 692750.0 618980.0 856570.0 780610.0 636640.0 True False 644319.2249477545 591061.5124251092 654239.3886267707 816855.8141189486 759249.7775844241 688426.2902874347 681552.5390626502 853598.7585949413 638870.9015767326 630999.8648984248 1.0211083405722658 0.9367062424335942 1.0368296809890551 1.294541979419349 1.2032487165534407 1.0910086175664302 1.0801151901551722 1.3527716978708852 1.0124739118281345 1.0 19.267280170753363 -5.015897459154185 21.560794254987158 1.1600383791932294 0.9808722739822472 0.287564835557491 0.10918536634503202 122.27757912790827 165842.7639190663 0.02827331042041064 0.051149070133421855 9.640566192207045e-06 5.015897459154185 -0.1791661052109822 DSISAVSSEKVS(ph)PS(ph)KSPSLSPSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 1 DSISAVSSEKVSPSKSPSLSPSPPSPLEK 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 DS(0.015)IS(0.018)AVS(0.023)S(0.025)EKVS(0.9)PS(0.506)KS(0.506)PS(0.006)LS(0.001)PS(0.003)PPS(0.996)PLEK 94.83200000000001 0.010615000000000001 383370000.0 239420.0 213730.0 204440.0 251660.0 224550.0 206400.0 211100.0 268820.0 314180.0 212080.0 True False 226138.8953280628 203462.08998472962 217618.52951556526 275577.6907356623 242220.8074852707 205111.78103980722 232440.04813746086 267887.52616305964 257132.8318332818 210201.13619574322 1.0758214699537971 0.9679400105395336 1.035287122867475 1.3110190350210058 1.1523287260431845 0.975788165335145 1.1057982480218773 1.2744342443211047 1.2232704184521386 1.0 17.681410941926885 -5.032571692282738 24.71220593909764 1.1531758639570138 1.0168138749645863 0.2265352180512077 0.1037190705589153 769.7980029240858 584047.0400549311 0.029421392215287438 0.05101606791621807 9.277443276959572e-06 5.032571692282738 -0.13636198899242746 DSISAVSSEKVS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 5 DSISAVSSEKVSPSK 15 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DSISAVSSEKVS(0.997)PS(0.003)K;DSISAVSSEKVS(0.997)PS(0.003)K;DSISAVSSEKVS(0.993)PS(0.007)K;DSISAVSSEKVS(0.999)PS(0.001)K;DSISAVSSEKVS(0.982)PS(0.018)K 343.3 2.8758999999999997e-54 13410910000.0 12712370.0 11179460.0 9113710.0 9211980.0 9880770.0 10950340.0 9895400.0 13017400.0 12623600.0 12596300.0 True False 12007189.494618678 10642381.960888436 9701194.32905158 10087483.809517216 10658330.38510904 10881994.86623762 10895723.6017974 12972245.677683994 10331472.455059553 12484706.581773097 0.9617518374159018 0.8524334866167907 0.7770462417766972 0.80798725572328 0.8537109234645167 0.8716260005761499 0.8727256448064615 1.039050905419169 0.8275302577108914 1.0 23.573658579350692 -7.028026500975143 19.45545249992864 0.9511525063924224 0.8503830325549444 0.3124038174270577 0.06740912916156132 56.299489400987326 39080.03611727618 0.031086091109491693 0.01806986510282976 9.375047979342376e-08 7.028026500975143 -0.10076947383747803 DSISAVSSEKVS(ph)PSKS(ph)PSLS(ph)PSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 1 DSISAVSSEKVSPSKSPSLSPSPPSPLEK 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 4 DS(0.005)IS(0.006)AVS(0.031)S(0.034)EKVS(0.854)PS(0.249)KS(0.811)PS(0.364)LS(0.643)PS(0.087)PPS(0.916)PLEK 96.59700000000001 0.009184999999999999 5683200000.0 6461600.0 5868000.0 4974900.0 6515900.0 5629700.0 5371200.0 5223900.0 6504200.0 7694500.0 5416200.0 True False 6103162.167119739 5586092.471952427 5295590.0141214365 7135169.176923227 6072725.361388681 5337676.3484545285 5751982.792350931 6481638.448291691 6297372.762560265 5368216.681739842 1.1369068219395535 1.0405862511015431 0.9864709880535473 1.3291507403554945 1.1312370050272464 0.9943108978090998 1.0714885656379114 1.2074099896785442 1.173084682662117 1.0 22.35601147472264 DSISAVSSEKVS(ph)PSKSPSLS(ph)PSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 1 DSISAVSSEKVSPSKSPSLSPSPPSPLEK 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 DS(0.006)IS(0.007)AVS(0.033)S(0.037)EKVS(0.904)PS(0.02)KS(0.055)PS(0.152)LS(0.749)PS(0.039)PPS(0.998)PLEK 97.605 0.008864200000000001 2468100000.0 365580.0 319180.0 303390.0 310030.0 335500.0 330850.0 292530.0 347980.0 442220.0 332280.0 True False 345300.5486343375 303846.1137010529 322947.00484116346 339495.1579860818 361901.9412661242 328785.0424274241 322101.7872176761 346772.9385991424 361923.99545901647 329336.2577099284 1.0484741371491204 0.9226014645756782 0.980599606878413 1.0308465892786731 1.098882776474854 0.9983262842471788 0.9780331793937361 1.0529449171811864 1.0989497420529706 1.0 18.329201826147713 -5.273929176135893 5.473172156594593 1.0378380706356942 0.97739958288033 0.2059532483270753 0.04726141545730416 0.24955032745010944 26.70874798252558 0.013526719738278311 0.02153585778857385 5.321950414794567e-06 5.273929176135893 -0.0604384877553642 DSISAVSSEKVS(ph)PSKSPSLSPSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 2 DSISAVSSEKVSPSKSPSLSPSPPSPLEK 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 DSIS(0.001)AVS(0.044)S(0.053)EKVS(0.895)PS(0.007)KSPSLSPS(0.003)PPS(0.997)PLEK;DS(0.054)IS(0.059)AVS(0.066)S(0.068)EKVS(0.629)PS(0.087)KS(0.047)PS(0.033)LS(0.023)PS(0.051)PPS(0.882)PLEK 153.73 3.2437e-07 2705900000.0 1550660.0 1552070.0 1445210.0 1453870.0 1438110.0 1369780.0 1285850.0 1473330.0 1910910.0 1376340.0 True False 1464641.7986359273 1477506.227495435 1538370.5490177567 1592045.3676780458 1551281.0752734013 1361230.694925907 1415836.2666866602 1468219.3621078087 1563936.914121001 1364146.6983763166 1.07366883662822 1.083099221846188 1.1277163598671691 1.167063168186374 1.1371805371957595 0.9978623974577805 1.037891502704121 1.0762914016911562 1.1464580136304152 1.0 20.379567367381146 -6.235699075917089 24.726248756680853 1.0556057910809098 1.1191146213988352 0.3349271061663588 0.04635081774601927 894.3887654885145 859154.5939574927 0.01630344760197552 0.016296524236371013 5.811669705561111e-07 6.235699075917089 0.06350883031792542 DSISAVSSEKVSPS(ph)KS(ph)PSLS(ph)PSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 1 DSISAVSSEKVSPSKSPSLSPSPPSPLEK 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 4 DS(0.005)IS(0.005)AVS(0.005)S(0.006)EKVS(0.462)PS(0.53)KS(0.888)PS(0.333)LS(0.675)PS(0.129)PPS(0.962)PLEK 72.191 0.06462999999999999 2834500000.0 1349100.0 1307900.0 1087100.0 1340700.0 1293800.0 1120700.0 1092600.0 1239300.0 1567400.0 1275000.0 True False 1274262.7336358258 1245066.5208020767 1157176.2054214994 1468119.7249038478 1395614.6992849808 1113705.2955974427 1203050.6707484107 1235001.1575547957 1282799.6709385882 1263704.4919349884 1.008354992617515 0.9852513216089205 0.9157015843550793 1.1617587294129643 1.1043837449275906 0.8813019995617278 0.952003160886368 0.977286355660379 1.0151104780630804 1.0 20.26922770858057 -6.256459086982833 24.995894690717147 0.9628997197326576 1.0327257043280131 0.1977407598163905 0.07029444380375521 803.3515113353285 4031993.170163859 0.02555841552462937 0.024821903307087348 5.540397351831848e-07 6.256459086982833 0.0698259845953555 DSITPDIATKPGQPLFLDSIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 DSITPDIATKPGQPLFLDSISPK 23 1 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 DSITPDIATKPGQPLFLDS(0.017)IS(0.983)PK;DSITPDIATKPGQPLFLDS(0.001)IS(0.999)PK;DSITPDIATKPGQPLFLDS(0.017)IS(0.983)PK;DSITPDIATKPGQPLFLDS(0.013)IS(0.987)PK 192.22 2.7846e-15 3094380000.0 3576240.0 3327120.0 2806590.0 2432790.0 2375640.0 3121080.0 2776290.0 3153080.0 3726550.0 3413680.0 True False 3377858.838142302 3167280.161091064 2987507.2821027758 2664001.6301550143 2562589.352457391 3101600.182014157 3056944.4871793035 3142142.701414402 3049902.4586807406 3383437.451002855 0.9983511996478908 0.9361131118745164 0.8829799058993317 0.7873654142373464 0.7573922643960321 0.9167009075621715 0.9035025861858985 0.9286835494721699 0.9014212625023542 1.0 21.690058287275495 -9.877970373352817 9.226349456853137 0.9999996793932755 0.8867725983811902 0.19361035632639 0.06683294209786486 0.0 0.0 0.07175536890841876 0.017403233247916 1.324431882043106e-10 9.877970373352817 -0.11322708101208534 DSKPIALKEEIVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 DSKPIALKEEIVTPK 15 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 DSKPIALKEEIVT(1)PK;DSKPIALKEEIVT(1)PK;DSKPIALKEEIVT(1)PK;DSKPIALKEEIVT(1)PK;DSKPIALKEEIVT(1)PK 159.75 1.3194e-07 7312200000.0 9522500.0 8835700.0 9062100.0 7682000.0 8114600.0 8058500.0 7900910.0 8728700.0 11604500.0 8451400.0 True False 8994267.942366876 8411219.70934391 9646257.46587266 8412094.970322475 8753172.854241718 8008203.912351203 8699611.088250794 8698422.176993897 9497415.325639166 8376527.171089697 1.0737466444816435 1.0041416374048124 1.1515819466526944 1.0042461271247989 1.044964419676445 0.9560291214705654 1.0385701509184107 1.0384282172467811 1.1338129909514343 1.0 22.99792080948975 -3.8142246551108814 16.809193953949773 1.041971464692588 43.2354981142278 0.028212254149356908 0.05699508067075485 815.7210354658532 73793.31806489384 0.013537652777576532 260.27683512194056 0.00015338233498883022 3.8142246551108814 42.193526649535215 DSKPS(ph)STPR ddPTM_KYSE-520_SHP099_60min_R1 2 DSKPSSTPR 9 1 P06748;P06748-3 P06748 NPM1 Nucleophosmin 1 DS(0.001)KPS(0.735)S(0.214)T(0.049)PR;DS(0.069)KPS(0.326)S(0.326)T(0.278)PR 71.888 0.013821 3263920000.0 2179710.0 1650610.0 1701920.0 2083970.0 1604190.0 2004750.0 2186390.0 1630970.0 2057960.0 2667440.0 True False 2058797.1411558415 1571312.2179838782 1811628.486368279 2282029.8822315745 1730430.6264074629 1992237.6116257461 2407411.6383101046 1625312.5457412591 1684286.3409498387 2643808.5568369185 0.778723987344609 0.5943366110683194 0.6852343683068078 0.8631600334034095 0.6545219100424461 0.7535483635809399 0.9105847063262245 0.6147618145565732 0.6370681933811945 1.0 21.33418628168354 -10.516474637652195 2.813039506578639 1.0121072468188865 0.7221166981371704 0.4098758722228548 0.10031011086561595 30856166.380139846 32712976.271688174 2864719.887549584 0.02709351559248105 3.044565784318562e-11 10.516474637652195 -0.28999054868171614 DSKPSST(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 DSKPSSTPR 9 1 P06748;P06748-3 P06748 NPM1 Nucleophosmin 1 DSKPS(0.286)S(0.286)T(0.428)PR 73.848 0.050898 635290000.0 614220.0 578870.0 532000.0 806110.0 542380.0 652710.0 609010.0 633610.0 696800.0 941900.0 True False 580147.9921827855 551060.2162984161 566293.5712300959 882722.4520341913 585062.2202799416 648636.1947795189 670574.6741648272 631412.1547956853 570278.6848985626 933555.4987871123 0.6214392105627587 0.5902811530909099 0.606598720660777 0.9455489825522275 0.6267032019414617 0.6948019647704241 0.7183018846078747 0.6763520279362334 0.6108674691965034 1.0 19.832376265977658 -11.283380202050534 2.224787593570709 2.36511512903696 0.6803315195270545 0.49264397278139127 0.098347568357542 3787333.2807506877 511932.2932030268 26054761.018189784 0.025992562522238326 5.207386321254685e-12 11.283380202050534 -1.6847836095099056 DSKPSSTPR ddPTM_KYSE-520_SHP099_60min_R1 8 DSKPSSTPR 9 1 P06748;P06748-3 P06748 NPM1 Nucleophosmin 0 ;;;;;;; 110.39 0.0010331 27640780000.0 8870100.0 7922080.0 5307370.0 5719210.0 7795010.0 8687450.0 6583780.0 7898100.0 7080440.0 8023190.0 False True 8378057.870894032 7541491.385515486 5649491.5622922415 6262761.998856814 8408432.939460073 8633228.402104042 7249332.733900763 7870703.3345303945 5794810.579367372 7952110.778547358 1.053564028999164 0.9483634717288381 0.7104392430665126 0.787559702482019 1.0573837781716708 1.0856524314769553 0.9116237104565369 0.9897627879837164 0.7287135127694904 1.0 22.92290642413027 -4.50988471176125 24.2228390533667 0.9101397031805208 1.0272639949666427 0.10582318582048877 0.12466584575097914 987.3147386132658 1840483.7796713826 0.03347909949075958 0.10928013979960285 3.091115894262889e-05 4.50988471176125 0.11712429178612183 DSLGDFIEHYAQLGPS(ph)SPEQLAAGAEEGGGPR ddPTM_KYSE-520_SHP099_60min_R1 4 DSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPR 32 0 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 DSLGDFIEHYAQLGPS(0.726)S(0.274)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.581)S(0.419)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.5)S(0.5)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.5)S(0.5)PEQLAAGAEEGGGPR 291.89 9.1119e-54 4366470000.0 1444310.0 1796280.0 1356540.0 1225720.0 1264810.0 1602650.0 1137110.0 1409670.0 1828960.0 1400900.0 True False 1364191.2451393951 1709984.012528753 1443984.7389407405 1342212.0602738452 1364343.3512155209 1592647.2668771688 1252060.175924149 1404780.1837894507 1496866.9683296145 1388489.1158837066 0.9825004960670166 1.2315429721178839 1.0399683529544368 0.96667092663495 0.9826100439737202 1.1470361911072853 0.901742881237692 1.011732946063013 1.0780545207060774 1.0 20.405084437498473 -4.983009856303248 24.99834775966254 1.012050135620864 1.114205253105872 0.1669615181738704 0.08302474673714319 360.4010143720774 530267.3820046693 0.02070354404733433 0.04308276710578375 1.0398965651326956e-05 4.983009856303248 0.10215511748500794 DSLGDFIEHYAQLGPS(ph)SPEQLAAGAEEGGGPRR ddPTM_KYSE-520_SHP099_60min_R1 2 DSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRR 33 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 DSLGDFIEHYAQLGPS(0.5)S(0.5)PEQLAAGAEEGGGPRR;DSLGDFIEHYAQLGPS(0.822)S(0.178)PEQLAAGAEEGGGPRR 219.73 1.0193000000000002e-22 261759000.0 189734.0 224745.0 219206.0 192026.0 168769.0 163199.0 105633.0 114551.0 260219.0 155108.0 True False 179209.07679464787 213947.9128508775 233336.36950200077 210276.09330527793 182050.16013574548 162180.41450540474 116311.41451873236 114153.64931740433 212969.7891871689 153733.8637921978 1.1657098336960094 1.3916771983306884 1.5177942175277774 1.3677929385129375 1.1841903640815457 1.0549426814941967 0.756576408408954 0.742540690135167 1.3853147506592325 1.0 17.23007546473474 -6.102722323324461 2.2041018257843086 0.9505245798430542 1.3730286915226408 0.47101320197818786 0.18540128292015695 0.2635771776215778 2.5265841621079086 0.06997006666762279 0.07157052858916445 7.893646556815904e-07 6.102722323324461 0.4225041116795867 DSLGDFIEHYAQLGPSS(ph)PEQLAAGAEEGGGPR ddPTM_KYSE-520_SHP099_60min_R1 8 DSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPR 32 0 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 DSLGDFIEHYAQLGPS(0.04)S(0.96)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.251)S(0.749)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.17)S(0.83)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.074)S(0.926)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.167)S(0.833)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.351)S(0.649)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.25)S(0.75)PEQLAAGAEEGGGPR;DSLGDFIEHYAQLGPS(0.043)S(0.957)PEQLAAGAEEGGGPR 279.78 1.1890000000000003e-42 11571650000.0 2838310.0 2979740.0 2500566.0 2436727.0 2064095.0 2704810.0 2254580.0 2801590.0 3237420.0 2837388.0 True False 2680863.2862692904 2836588.817719076 2661756.48540706 2668312.8014513124 2226527.533405965 2687928.277491674 2482494.948980371 2791871.938186019 2649586.13671686 2812250.9497744576 0.9532802492196849 1.008654230500507 0.9464861183958468 0.9488174594323849 0.7917243422335879 0.9557924685587699 0.8827430386962682 0.9927534875256873 0.9421585000902415 1.0 21.423293907632644 -10.019120283109181 12.63377655262272 1.0000034260894302 0.9351235538029996 0.10044317534187408 0.05758299484240233 0.0 0.0 0.05762784482706307 0.013976805364628553 9.569290015291932e-11 10.019120283109181 -0.06487987228643055 DSLGDFIEHYAQLGPSS(ph)PEQLAAGAEEGGGPRR ddPTM_KYSE-520_SHP099_60min_R1 1 DSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRR 33 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 DSLGDFIEHYAQLGPS(0.453)S(0.547)PEQLAAGAEEGGGPRR 179.62 5.434e-11 172450000.0 207830.0 234650.0 273810.0 217250.0 180910.0 171280.0 127390.0 159760.0 333530.0 151960.0 True False 196301.2556011666 223377.06178316943 291460.2307114899 237897.3746814055 195146.58776290456 170210.97798691012 140267.82440658973 159205.82984826434 272969.3596070865 150613.75262309102 1.303342172825399 1.483111986075851 1.9351501814104946 1.5795196025474554 1.2956757557940701 1.1301157764315248 0.9313082103306207 1.057047096135204 1.8123800440069298 1.0 17.200493983724648 -5.857053539590941 3.578879692921959 1.1772215262820074 1.5962112112259146 0.31714396610879636 0.2694992858865539 0.28441760832424545 7.079877884219143 0.08925848319885928 0.10434030044534356 1.389781289159706e-06 5.857053539590941 0.4189896849439072 DSLITPHVS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 DSLITPHVSR 10 0 P49792;Q7Z3J3;J3KNE0;A6NKT7;A0A1W2PNU4;A0A286YES2;F8VYC4;P0DJD0;P0DJD1;J3KQ37;H7BZ48;Q99666;O14715 P49792;Q99666 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2;RGPD8;RGPD6;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 DSLITPHVS(1)R 166.08 5.8677e-05 567650000.0 549900.0 516310.0 504590.0 659570.0 502680.0 477060.0 488230.0 495060.0 543700.0 447880.0 True False 519395.950801527 491505.69260288985 537116.6787725454 722255.334493049 542238.0561420434 474082.4915835785 537585.0530656207 493342.7524078722 444977.78556163725 443912.1316453678 1.1700422533540076 1.1072139226768047 1.2099617029652094 1.6270231944686833 1.221498619855756 1.0679647114540074 1.211016808828929 1.1113522637448294 1.0024005965151699 1.0 18.7599146109562 -7.207955230078908 0.9604099335031815 0.9977231557618603 1.2587100488915974 0.31346953686683054 0.1409796437454398 0.7818488672697946 1.2926172052994662 0.13628018758447516 0.05737596355441393 6.195049344134115e-08 7.207955230078908 0.2609868931297371 DSLLDGHFVLATLSDT(ph)DSHSQDLGS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 DSLLDGHFVLATLSDTDSHSQDLGSPER 28 0 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 2 DSLLDGHFVLAT(0.017)LS(0.004)DT(0.452)DS(0.452)HS(0.075)QDLGS(1)PER 72.113 0.028210000000000002 86492000.0 83119.0 80234.0 78022.0 83215.0 80849.0 76322.0 67746.0 85327.0 95907.0 75554.0 True False 78508.22337638149 76379.4382063107 83051.42295961393 91123.728580498 87211.35633211597 75845.64608779158 74594.42681724494 85031.02055247143 78492.7064187235 74884.65034012261 1.0483887287955647 1.0199612051254674 1.109058032352401 1.216854564541842 1.1646092481704333 1.0128330137525403 0.9961243923613252 1.1354933242829401 1.048181517336507 1.0 16.192382408679016 -6.272419176387083 24.90912259495985 1.0443446547649893 1.1123605090901445 0.24919638548596645 0.06316430597983419 1261.3920627150442 2861628.269933494 0.02488783519267801 0.02216702647620297 5.340486525144144e-07 6.272419176387083 0.06801585432515522 DSLLDGHFVLATLSDTDS(ph)HSQDLGS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 DSLLDGHFVLATLSDTDSHSQDLGSPER 28 0 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 2 DSLLDGHFVLAT(0.001)LS(0.019)DT(0.091)DS(0.445)HS(0.445)QDLGS(1)PER 100.17 0.0017847000000000002 55589000.0 53542.0 61493.0 53729.0 83966.0 55425.0 53882.0 43563.0 43551.0 64882.0 48531.0 True False 50571.91852666919 58538.78397712523 57192.45730943957 91946.1033947016 59786.632174888065 53545.702451486904 47966.77317390905 43399.9317458798 53101.06434211905 48101.053096546675 1.051368219010987 1.2169958911217251 1.18900634451069 1.911519550521082 1.2429381131196136 1.113191895071651 0.9972083787361558 0.9022657291674893 1.1039480619174082 1.0 15.553780859418655 -6.337513621651126 2.9717322149767416 1.000380010540521 1.344578564411943 0.32917986123215537 0.21820238936533637 0.33247434563329564 5.751110156352047 0.08773541782980346 0.07752959054439847 4.597125694150299e-07 6.337513621651126 0.34419855387142206 DSLLDGHFVLATLSDTDSHS(ph)QDLGS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 DSLLDGHFVLATLSDTDSHSQDLGSPER 28 0 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 2 DSLLDGHFVLATLSDT(0.004)DS(0.433)HS(0.563)QDLGS(1)PER 110.98 0.00029495 68145000.0 109580.0 101370.0 109930.0 116250.0 104250.0 107380.0 93623.0 94265.0 132800.0 104090.0 True False 103501.3789576858 96500.03304052801 117016.263694219 127298.36504816309 112453.8818986393 106709.8015894115 103087.32651242775 93938.0167166163 108686.86761557008 103167.84358079455 1.0032329393085555 0.9353692942603309 1.134231943140105 1.2338957627671168 1.0900090376568985 1.034331996149974 0.9992195526670697 0.9105358167445845 1.0534955839263362 1.0 16.654633841169648 -6.582728333183346 2.8385237915603074 0.9828443395762194 1.082082316720294 0.21053935860602435 0.08021807632962169 0.4497588631322677 7.365261350194221 0.03753282996509822 0.02851031179647281 2.6137958664354144e-07 6.582728333183346 0.09923797714407456 DSLLDGHFVLATLSDTDSHSQDLGS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 DSLLDGHFVLATLSDTDSHSQDLGSPER 28 0 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 1 DSLLDGHFVLATLSDTDSHSQDLGS(1)PER 165.8 2.9015e-10 265240000.0 71240.0 117320.0 97660.0 173320.0 91972.0 84318.0 86877.0 79900.0 93635.0 74519.0 True False 67288.17518658085 111683.77109908976 103955.31986152478 189792.28068944186 99209.67315090311 83791.74008582608 95659.3749978123 79622.84554880022 76633.24434626433 73858.81963490465 0.9110377815296332 1.5121250468279832 1.4074868834269447 2.569663062957327 1.343233937955028 1.1344852314188254 1.2951652283460675 1.0780411322897934 1.0375638918286818 1.0 16.17248258603453 -5.994353416759027 24.998697603062308 1.1381494563582644 1.627090369589812 0.2581155086611441 0.38988465289532404 222.27361366175845 984044.7998048407 0.12569108552487826 0.14209914700312354 1.0130866285050496e-06 5.994353416759027 0.48894091323154765 DSLLQDGEFSMDLR ddPTM_KYSE-520_SHP099_60min_R1 6 DSLLQDGEFSMDLR 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ;;;;; 238.13 1.706e-17 1035310000.0 821567.0 1149399.0 1743130.0 801753.0 1195830.0 1041761.0 912271.0 915072.0 1453480.0 1127903.0 False True 775993.040756789 1094180.1467569266 1855494.948906613 877951.3640641699 1289935.017658032 1035258.983177379 1004492.2555869708 911897.8288114112 1189564.671249086 1117910.6569152558 0.6941458478426634 0.9787724448178973 1.6597882285393317 0.7853502054330302 1.1538802404992339 0.9260659398614693 0.8985443061780537 0.8157161962546157 1.0640963693212757 1.0 20.092373462356996 -6.289744381750143 20.94431070886455 0.9267203376619805 1.0688733861959854 0.0461899953189433 0.24953740407250724 303.311514182193 224431.83956954133 0.08908601026812245 0.07860537421544113 5.131633342188439e-07 6.289744381750143 0.1421530485340049 DSLPLPVRSR ddPTM_KYSE-520_SHP099_60min_R1 2 DSLPLPVRSR 10 1 A0A0A0MSK4;A0A0A0MRC4;Q86YR5-4;Q86YR5 A0A0A0MSK4 GPSM1 G-protein-signaling modulator 1 0 ; 70.028 0.026160000000000003 1176010000.0 193881.0 159440.0 197938.0 171216.0 177621.0 167464.0 149559.0 138720.0 194566.0 181708.0 False True 183126.03443780853 151780.26307568094 210697.40019199788 187488.31716203238 191598.76217475504 166418.7950583832 164677.88327518 138238.81269749143 159237.71900972145 180098.20848668486 1.0168120825663156 0.8427638695079105 1.1699028100414186 1.041033771170988 1.0638571243140402 0.9240447001486246 0.9143782420653844 0.7675746130906782 0.8841715880893636 1.0 17.458424304652514 -6.512647822048047 2.7008994900367007 0.8716805993732992 1.024963624650594 0.3192086666131648 0.0926449979159745 0.3161997824260114 4.649201898199384 0.03855581989479585 0.030556706383504544 3.0715117281412504e-07 6.512647822048047 0.15328302527729476 DSLS(ph)PVLHPSDLILTR ddPTM_KYSE-520_SHP099_60min_R1 4 DSLSPVLHPSDLILTR 16 0 Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5 Q9HCN4-3 GPN1 GPN-loop GTPase 1 1 DS(0.172)LS(0.828)PVLHPSDLILTR;DS(0.262)LS(0.738)PVLHPSDLILTR;DS(0.083)LS(0.917)PVLHPSDLILTR;DS(0.027)LS(0.973)PVLHPSDLILTR 140.63 1.0862e-05 730659000.0 737166.0 1095652.0 1808748.0 857047.0 562218.0 1046252.0 529558.0 551753.0 672565.0 1145308.0 True False 696273.9324760109 1043015.233312819 1925342.7901791253 938500.4891994235 606461.3580171627 1039721.9531805267 583090.8906280306 549839.0976231184 550444.1499839294 1135161.4621561414 0.6133699528113812 0.9188254429741664 1.696095977855082 0.8267550656774612 0.5342511864922207 0.9159242872865543 0.5136633950913906 0.48437082825094013 0.4849038382067764 1.0 20.114466086298304 -5.516520694538939 24.35025919164947 0.6397410772639763 1.093879203118075 0.28005563952803325 0.3008986279716405 248.332688073287 951074.1578472087 0.08935732914537838 0.11975184537700474 3.0442429255388855e-06 5.516520694538939 0.45413812585409874 DSLS(ph)SPGNFVLTCQWK ddPTM_KYSE-520_SHP099_60min_R1 1 DSLSSPGNFVLTCQWK 16 0 O75815;O75815-3 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 DS(0.006)LS(0.497)S(0.497)PGNFVLTCQWK 94.544 0.0018259 0.0 232430.0 214840.0 199210.0 155250.0 181170.0 198550.0 173680.0 168310.0 258040.0 207660.0 True False 219536.64456228228 204518.76391858573 212051.39534726972 170004.91332238534 195427.04828370694 197310.77580161722 191237.26935345412 167726.17189384945 211186.44065904905 205820.2939570352 1.0666423623324062 0.9936763765446707 1.030274475225146 0.8259871271871456 0.9495032998276747 0.9586555922556678 0.9291468089797535 0.8149156172561979 1.0260719999901178 1.0 17.65102571394623 -5.20817190083191 24.996910195287207 0.9235442380153083 1.0265457212002653 0.33342001129605614 0.06505006122968837 359.0672850667911 168499.35259662048 0.016873434734345095 0.029225627884009918 6.191959387243766e-06 5.20817190083191 0.10300148318495705 DSLSS(ph)PGNFVLTCQWK ddPTM_KYSE-520_SHP099_60min_R1 4 DSLSSPGNFVLTCQWK 16 0 O75815;O75815-3 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 DS(0.005)LS(0.147)S(0.848)PGNFVLTCQWK;DSLS(0.081)S(0.919)PGNFVLTCQWK;DSLS(0.001)S(0.999)PGNFVLTCQWK;DS(0.002)LS(0.154)S(0.844)PGNFVLTCQWK 320.06 2.5846e-47 1351130000.0 3385517.0 3168145.0 2688725.0 2284623.0 2483889.0 2841114.0 2605953.0 2658078.0 3251880.0 2808068.0 True False 3197715.623149179 3015942.5587174078 2862044.515612108 2501752.883023046 2679356.9329048335 2823381.553668275 2869388.1608903874 2648857.7478180695 2661420.5652237902 2783190.7021638434 1.148938741661883 1.0836277069956461 1.0283321632926405 0.8988794339812977 0.9626925423477872 1.0144405668907934 1.0309707339348066 0.9517341897408128 0.9562480081421008 1.0 21.408308333775285 -4.723605141199944 2.3017487566744146 0.9749793344099869 1.1387626379221167 0.7117275229162499 0.03658571676388688 0.1789857482996012 1.8130738060526024 0.010804017534155505 0.04015085210896218 1.8897086838327157e-05 4.723605141199944 0.16378330351212989 DSNAPKS(ph)PLTGYVR ddPTM_KYSE-520_SHP099_60min_R1 1 DSNAPKSPLTGYVR 14 1 H0YNS8;H0YKM5;Q9NP66 H0YNS8 HMG20A High mobility group protein 20A 1 DS(0.001)NAPKS(0.8)PLT(0.199)GYVR 68.243 0.016299 750640000.0 1211500.0 1154000.0 1167100.0 599040.0 969640.0 983640.0 838390.0 869950.0 1447300.0 936440.0 True False 1144295.6799346257 1098560.1078106854 1242333.1334260236 655972.5814920573 1045945.1515030834 977500.7378972679 923142.6430978955 866932.3464978557 1184506.8034639652 928143.8701392958 1.232886103921464 1.1836097216758146 1.338513535880568 0.7067574355618046 1.1269213590195968 1.053178035588992 0.9946115821024065 0.9340495308854936 1.2762103393369333 1.0 19.823988927040553 -5.200540795413225 24.99999710204132 1.0159952115105253 1.244863856209584 0.3770694926454009 0.14039996553452594 258.32809942464297 106047.74882916176 0.036573249736531394 0.06334670968177947 6.3017214804628325e-06 5.200540795413225 0.22886864469905865 DSNNLCLHFNPR ddPTM_KYSE-520_SHP099_60min_R1 3 DSNNLCLHFNPR 12 0 P09382 P09382 LGALS1 Galectin-1 0 ;; 186.17 3.2529e-08 1853970000.0 2484660.0 2797250.0 1882880.0 2368660.0 2965810.0 2462310.0 1935540.0 2173540.0 2210700.0 1997720.0 False True 2346830.9567530886 2662865.9112421516 2004253.4575145156 2593776.7342364057 3199202.3738494343 2446941.809942481 2131203.2722500283 2166000.497048049 1809292.6072119041 1980021.755002643 1.1852551371335593 1.344866996796506 1.0122380991272695 1.3099738564402508 1.6157410219188042 1.2358156185709257 1.0763534627159608 1.0939276255806378 0.9137741050776935 1.0 20.917084850973506 -6.800334657838129 3.1577523727909753 1.0164130241476992 1.2935191503873198 0.4429172264951148 0.14676270738549366 0.26350765722618774 5.376880961150404 0.07033067864646093 0.047099791538190675 1.5836723788245466e-07 6.800334657838129 0.2771061262396206 DSPAFPDS(ph)PWR ddPTM_KYSE-520_SHP099_60min_R1 3 DSPAFPDSPWR 11 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 DSPAFPDS(1)PWR;DSPAFPDS(1)PWR;DSPAFPDS(1)PWR 178.22 5.552999999999999e-06 1108750000.0 735520.0 688310.0 632260.0 509950.0 589950.0 655080.0 657670.0 581140.0 764900.0 696740.0 True False 694719.2393772309 655242.5544256265 673016.4912517681 558415.4946779419 636375.708643666 650991.4027304124 724153.7018406617 579124.1609790951 626013.4415598613 690567.4256555177 1.0060121771856991 0.9488466007553726 0.9745847635557244 0.8086328342925656 0.9215258134129184 0.9426905737878702 1.0486357666715345 0.8386207334198603 0.9065203748433704 1.0 19.397422757725113 -4.469219583069876 1.8122484189279124 0.9237624433814606 1.0102828963301627 0.10420562796641897 0.0669496573961976 1.3212648908024751 6.096426653079332 0.018955985070543944 0.17003300286548945 3.3945359850031664e-05 4.469219583069876 0.08652045294870203 DSPDS(ph)PEPPNKKPLVEMDETPQVEK ddPTM_KYSE-520_SHP099_60min_R1 2 DSPDSPEPPNKKPLVEMDETPQVEK 25 2 H0YH12;Q9NVM9-2;Q9NVM9 H0YH12 ASUN Protein asunder homolog 1 DSPDS(1)PEPPNKKPLVEMDETPQVEK;DS(0.003)PDS(0.997)PEPPNKKPLVEMDETPQVEK 172.83 1.4771e-10 3318000000.0 1873990.0 1465440.0 1292470.0 1451110.0 1475020.0 1675430.0 1582980.0 1770920.0 1719740.0 1633540.0 True False 1770036.038993553 1395038.0627297137 1375784.6842251169 1589023.05810787 1591095.6822842301 1664973.019900797 1743003.0667960076 1764777.0918558352 1407478.5671174738 1619068.1064748883 1.0932437195908697 0.8616302533233494 0.849738611194399 0.9814429990641753 0.9827231330919358 1.0283526759883221 1.0765470951008702 1.089995587460611 0.8693139970386439 1.0 20.626732243542136 -5.713362617280934 2.4531370815077 1.0197803498840838 0.9278753407692175 0.11652334478104664 0.08413015897991606 0.498199748951485 6.1315873402560435 0.027550236460548737 0.03606238366302878 1.9348058093948163e-06 5.713362617280934 -0.09190500911486632 DSPSVWAAVPGK ddPTM_KYSE-520_SHP099_60min_R1 1 DSPSVWAAVPGK 12 0 P07737;CON__P02584;I3L3D5 P07737 PFN1 Profilin-1 0 186.78 7.596600000000001e-07 1312400000.0 1791900.0 1915800.0 1300500.0 1391500.0 2056400.0 1841200.0 1723500.0 1809300.0 1841900.0 1742900.0 False True 1692499.7349359093 1823762.092325574 1384332.3108735722 1523747.7416302692 2218226.980684524 1829708.387841536 1897728.1997390522 1803023.960593796 1507457.39052047 1727459.2619556794 0.9797624593588435 1.0557482497508328 0.8013690055453762 0.8820744866105926 1.284097998451923 1.0591904701533157 1.098566108928444 1.043743259422841 0.8726442491117606 1.0 20.720220257785744 DSQDAS(ph)AEQSDHDDEVASLASASGGFGTK ddPTM_KYSE-520_SHP099_60min_R1 2 DSQDASAEQSDHDDEVASLASASGGFGTK 29 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 DS(0.003)QDAS(0.616)AEQS(0.378)DHDDEVAS(0.003)LASASGGFGTK;DS(0.001)QDAS(0.694)AEQS(0.305)DHDDEVASLASASGGFGTK 99.446 0.00010356 3603500000.0 3605300.0 3801900.0 3528100.0 4193900.0 3618100.0 3355700.0 3711000.0 3574200.0 4502600.0 3574100.0 True False 3405306.8220126275 3619251.0172317564 3755526.9711595913 4592486.995057992 3902823.8858270203 3334755.831566284 4086144.0958698103 3561801.9344245526 3685041.341309229 3542436.25460772 0.9612895129963948 1.0216841622835477 1.060153719428176 1.296420504133123 1.1017344012190866 0.9413735609860864 1.153484156716971 1.0054667687503602 1.0402562181651172 1.0 21.756310461708466 DSQDASAEQS(ph)DHDDEVASLASASGGFGTK ddPTM_KYSE-520_SHP099_60min_R1 10 DSQDASAEQSDHDDEVASLASASGGFGTK 29 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 DSQDAS(0.001)AEQS(0.999)DHDDEVASLASASGGFGTK;DS(0.003)QDAS(0.02)AEQS(0.976)DHDDEVAS(0.001)LASASGGFGTK;DSQDAS(0.001)AEQS(0.999)DHDDEVASLASASGGFGTK;DSQDAS(0.004)AEQS(0.996)DHDDEVASLASASGGFGTK;DSQDAS(0.001)AEQS(0.999)DHDDEVASLASASGGFGTK;DSQDASAEQS(1)DHDDEVASLASASGGFGTK;DSQDAS(0.031)AEQS(0.969)DHDDEVASLASASGGFGTK;DSQDASAEQS(1)DHDDEVASLASASGGFGTK;DSQDASAEQS(1)DHDDEVASLASASGGFGTK;DSQDASAEQS(1)DHDDEVASLASASGGFGTK 341.99 5.493699999999999e-79 21873000000.0 10395439.0 10782240.0 9774592.0 12131254.0 10652401.0 9799099.0 9780014.0 9602684.0 12817140.0 9849288.0 True False 9818783.275876112 10264245.005927805 10404677.840220178 13284204.732765477 11490684.354829235 9737939.188349787 10768673.25885855 9569374.530487297 10489870.46980593 9762030.970950115 1.005813575586359 1.0514456506511995 1.0658312672006935 1.3608033791632763 1.177079276743052 0.9975320932015048 1.1031181206968104 0.9802647173486617 1.074558204232472 1.0 23.21874989814707 -6.262637452938691 24.985511603760585 1.034362639615649 1.13672220842984 0.21435838445925204 0.09647933489716205 191.05030007991132 3984289.2425539084 0.03603408769225361 0.03355756431840307 5.462136474930977e-07 6.262637452938691 0.10235956881419117 DSQQTEFTQNAATGLNIS(ph)RDETVLQEEAR ddPTM_KYSE-520_SHP099_60min_R1 2 DSQQTEFTQNAATGLNISRDETVLQEEAR 29 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 DSQQTEFTQNAATGLNIS(0.997)RDET(0.002)VLQEEAR;DSQQTEFTQNAAT(0.002)GLNIS(0.996)RDET(0.002)VLQEEAR 169.03 2.3921e-10 393590000.0 85256.0 73774.0 71044.0 43868.0 47464.0 74311.0 48459.0 61791.0 68718.0 55199.0 True False 80526.67972637757 70229.78630296838 75623.60991441912 48037.2015306049 51199.14676678191 73847.19748473419 53357.70863426438 61576.6614431278 56240.54343980982 54709.97980417217 1.4718828267642061 1.2836741405196546 1.3822635319023109 0.8780336184101751 0.9358282885507019 1.3497939086993158 0.9752829159369445 1.125510586250152 1.027975949563793 1.0 15.739516402708691 -5.241667345085924 24.790138093281744 1.0526538142695276 1.3697136237217293 0.59051339628664 0.12849408435649537 554.3710384674887 695068.2622486494 0.035253127139650293 0.06094710392566414 5.7323494148541235e-06 5.241667345085924 0.3170598094522017 DSQS(ph)ASGEERPPEADGK ddPTM_KYSE-520_SHP099_60min_R1 1 DSQSASGEERPPEADGK 17 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 DS(0.095)QS(0.881)AS(0.023)GEERPPEADGK 97.69 0.00072626 39723000.0 85274.0 91163.0 78873.0 74528.0 84178.0 82054.0 81290.0 98358.0 92361.0 94193.0 True False 80543.68123049533 86783.39264154721 83957.27978126204 81611.11871233965 90802.32969269689 81541.87054961415 89507.58651394687 98016.81905492966 75590.57063133779 93358.52330104503 0.862735167423045 0.9295711797165473 0.8992995691516282 0.8741689117037064 0.9726196011037427 0.8734271672943373 0.9587510957657247 1.0498968448640027 0.8096804443616521 1.0 16.510494120938453 -6.191300382005091 0.8636013595576932 0.9542281603887492 0.8942188917269644 0.11016762447257955 0.06514440543505297 1.3894383674428814 2.2540796478964644 0.038984451358512334 0.03920267468648635 6.437238765854711e-07 6.191300382005091 -0.0600092686617848 DSQSAS(ph)GEERPPEADGK ddPTM_KYSE-520_SHP099_60min_R1 1 DSQSASGEERPPEADGK 17 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 DS(0.003)QS(0.354)AS(0.644)GEERPPEADGK 161.51 1.968e-06 0.0 72250.0 58955.0 66402.0 63645.0 66169.0 69507.0 73203.0 72671.0 80482.0 72573.0 True False 68242.1484731958 56122.71330674089 70682.37916695642 69693.80166443302 71376.12384989025 69073.18103068744 80603.07363243257 72418.92126253889 65868.4975861167 71930.05968093961 0.948729206897613 0.7802400492323318 0.9826542544310748 0.9689106609055246 0.9922989660580507 0.960282548590611 1.1205756534884563 1.0067963461140965 0.9157297780411945 1.0 16.13430718067024 -4.880216909748035 7.8723081131002175 0.9970849292261034 0.8651805461085564 0.40991745310013117 0.061945984627688695 0.204198591961484 13.088092057179802 0.016117565204397933 0.03383712443727699 1.3175984954672041e-05 4.880216909748035 -0.13190438311754693 DSRPLS(ph)PILHIVK ddPTM_KYSE-520_SHP099_60min_R1 4 DSRPLSPILHIVK 13 1 O95487-2;O95487;O95487-3 O95487-2 SEC24B Protein transport protein Sec24B 1 DS(0.139)RPLS(0.861)PILHIVK;DS(0.413)RPLS(0.587)PILHIVK;DS(0.252)RPLS(0.748)PILHIVK;DS(0.215)RPLS(0.785)PILHIVK 153.72 2.6882e-06 2318307000.0 3959170.0 3682530.0 3455420.0 3365660.0 3902370.0 3815170.0 3388165.0 3894490.0 4447940.0 3343078.0 True False 3739546.947690276 3505615.731209779 3678161.902067477 3685531.314477427 4209464.317551967 3791358.1088645407 3730673.783503832 3880980.9231708036 3640306.219442763 3313460.929795326 1.1285924376121341 1.057992173587006 1.110066477317624 1.1122905604035849 1.270413144063234 1.1442290068284386 1.1259145233785137 1.1712771043328805 1.0986416609619194 1.0 21.659907477504824 -5.538209472100437 24.99984251448825 1.1479795621789621 1.0975251580438736 0.03841073729478206 0.06561340318458206 524.3404387515498 855038.1189682869 0.018740328997841484 0.024200562424567845 2.8959464566519164e-06 5.538209472100437 -0.050454404135088504 DSS(ph)QEYTDSTGIDLHEFLVNTLK ddPTM_KYSE-520_SHP099_60min_R1 6 DSSQEYTDSTGIDLHEFLVNTLK 23 0 Q15032-2;Q15032-4;Q15032;Q15032-3;H7C2F9;B5MCU0;A0A0U1RRA6;B5MCG9;Q9Y2K5;H0YIX9 Q15032-2;B5MCU0 R3HDM1;R3HDM2 R3H domain-containing protein 1;R3H domain-containing protein 2 1 DS(0.179)S(0.821)QEYTDSTGIDLHEFLVNTLK;DS(0.41)S(0.549)QEY(0.017)T(0.022)DS(0.001)T(0.001)GIDLHEFLVNTLK;DS(0.192)S(0.808)QEYTDSTGIDLHEFLVNTLK;DS(0.132)S(0.868)QEYTDSTGIDLHEFLVNTLK;DS(0.141)S(0.859)QEYTDSTGIDLHEFLVNTLK;DS(0.124)S(0.876)QEYTDSTGIDLHEFLVNTLK 297.46 1.0267e-48 1124270000.0 761432.0 786286.0 657592.0 699058.0 661378.0 625825.0 664588.0 704314.0 856646.0 576196.0 True False 719193.8490829391 748511.6403206527 699981.4325044011 765496.2621405483 713424.6858739394 621918.9940370038 731771.0407938365 701870.8991221235 701100.6806883108 571091.3517137046 1.259332411399359 1.310668841463898 1.2256908293286688 1.340409480625967 1.2492304142465604 1.0890008965654583 1.2813554934739804 1.228999348380923 1.2276506702202372 1.0 19.123362011834047 -13.940257736439833 0.18470901495610442 1.245702573201768e-12 1.2939094709053691 0.6090116198800928 0.06081821224846282 92.46360358469774 0.915273979913705 33.99060866610765 0.1837874911753034 1.147472440298821e-14 13.940257736439833 1.2939094709041234 DSS(ph)VEVR ddPTM_KYSE-520_SHP099_60min_R1 2 DSSVEVR 7 0 O15371-2;O15371;O15371-3;B0QYA6;B0QYA5 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 1 DS(0.108)S(0.892)VEVR;DS(0.074)S(0.926)VEVR 134.48 0.0022636999999999996 641643000.0 1357030.0 1183421.0 1130249.0 1168166.0 1242544.0 1240666.0 1292107.0 1095735.0 1419074.0 1207988.0 True False 1281752.8407277635 1126567.6788088654 1203106.6590023388 1279188.1454180852 1340325.1436917295 1232922.5432923154 1422725.7853090954 1091934.1510314716 1161405.9335444083 1197286.1661204433 1.070548442801287 0.940934348602117 1.0048614049394353 1.0684063523117686 1.1194693312416482 1.029764293767249 1.188292177399111 0.9120076569243734 0.970032032782691 1.0 20.191336584680556 -7.312948040849896 24.99998219096257 0.9557648705539467 1.0550105501927396 0.3258475885719878 0.06525376004718028 450.4638354257862 218632.6253121211 0.03687917283194876 0.017716215164136236 4.864654031081436e-08 7.312948040849896 0.09924567963879294 DSSFT(ph)EVPRSPK ddPTM_KYSE-520_SHP099_60min_R1 3 DSSFTEVPRSPK 12 1 O95425-2;O95425-3;A0A6I8PIX7;O95425-4;O95425 O95425-2 SVIL Supervillin 1 DS(0.004)S(0.072)FT(0.561)EVPRS(0.363)PK;DSS(0.007)FT(0.864)EVPRS(0.129)PK;DS(0.001)S(0.011)FT(0.494)EVPRS(0.494)PK 155.57 3.0068e-05 4908200000.0 3240140.0 3192580.0 2900470.0 2957610.0 2861120.0 2845470.0 2946910.0 3173550.0 3658370.0 2912640.0 True False 3060402.975141047 3039203.664639725 3087438.9371160874 3238700.3651621295 3086273.8664540467 2827710.3662564936 3244812.4218700374 3162541.695762135 2994102.228002806 2886836.275599628 1.0601234995584803 1.0527800590313867 1.069488755982461 1.1218857101584034 1.0690851755397845 0.979518786762213 1.1240029264202223 1.0955043493435526 1.0371569227218809 1.0 21.461057858027814 -6.011746124993841 24.978387007609722 1.0542589026605453 1.076629611481791 0.08364644372462116 0.042811640998824 2035.5177994045719 4328571.25171125 0.014216870728889554 0.015044073070755587 9.733160276951266e-07 6.011746124993841 0.0223707088212457 DSSFTEVPRS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 DSSFTEVPRSPK 12 1 O95425-2;O95425-3;A0A6I8PIX7;O95425-4;O95425 O95425-2 SVIL Supervillin 1 DSSFTEVPRS(1)PK;DSSFT(0.047)EVPRS(0.953)PK;DSSFTEVPRS(1)PK;DS(0.002)S(0.07)FT(0.355)EVPRS(0.573)PK;DS(0.001)SFT(0.001)EVPRS(0.998)PK;DS(0.002)S(0.002)FT(0.084)EVPRS(0.912)PK;DSSFT(0.001)EVPRS(0.999)PK;DSSFTEVPRS(1)PK 205.04 2.0360000000000002e-08 26043160000.0 9369410.0 8368750.0 8173800.0 7998710.0 8501550.0 7844490.0 7797610.0 8629140.0 10838490.0 8040690.0 True False 8849670.149844212 7966702.68825016 8700696.226542413 8758904.993500145 9170573.61779738 7795529.628144181 8585868.516139966 8599207.52739642 8870493.432098493 7969455.7421621615 1.1104484968810735 0.9996545493191666 1.0917553855668771 1.09905936827799 1.1507151698303237 0.978175910671311 1.0773469097414885 1.0790206766445263 1.1130613832472172 1.0 22.926049770968433 -10.273189844507092 14.970156676750312 1.000000000202926 1.0756894619094064 0.18146400604520507 0.049337631707366665 0.0 0.0 0.04729856972795026 0.011471588172292995 5.331018080831676e-11 10.273189844507092 0.0756894617064805 DSSKGEDS(ph)AEETEAK ddPTM_KYSE-520_SHP099_60min_R1 1 DSSKGEDSAEETEAK 15 1 Q12906;Q12906-5;Q12906-2;Q12906-3;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 DSSKGEDS(0.97)AEET(0.029)EAK 64.346 0.0268 469490000.0 1571300.0 1299000.0 1200800.0 1440500.0 1435700.0 1380800.0 1429700.0 1507800.0 1431400.0 1331400.0 True False 1484136.8566911065 1236594.0901612495 1278205.489347931 1577404.6868978841 1548681.4219844239 1372181.9150182474 1574228.0285273686 1502569.7937231637 1171493.8426575814 1319604.8318135247 1.1246827996616733 0.9370942424193809 0.9686274697791922 1.1953614058309159 1.1735948404008802 1.0398430514478083 1.1929541257922773 1.1386513276540458 0.8877611042448251 1.0 20.331674534865154 -3.9021477016106774 20.543712429177837 1.0697785853438355 6.7507807316710515 0.024648873397971616 0.1063939676787144 3544.826782241105 772901.8833156717 0.02645254860565935 36352.346686078745 0.00012527150596972243 3.9021477016106774 5.6810021463272165 DSSKGEDS(ph)AEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_KYSE-520_SHP099_60min_R1 1 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 45 2 Q12906-7;Q12906-4;Q12906-6 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.122)S(0.122)KGEDS(0.391)AEET(0.365)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 61.483000000000004 0.0087154 328900000.0 109060.0 120050.0 108190.0 88437.0 100470.0 137140.0 87329.0 96092.0 161080.0 120800.0 True False 103010.2243942799 114282.61780127636 115164.10051012061 96842.02589044647 108376.41740389707 136284.05839050008 96157.06756890706 95758.6792800413 131831.9324963556 119729.80598097788 0.8603557280519246 0.954504326344879 0.9618665925877918 0.8088380758408001 0.9051749187759931 1.138263419654687 0.8031172086270987 0.7997898142026137 1.1010786446718244 1.0 16.869422821272067 -6.036503713878362 24.98733223406948 0.9540606752780496 0.8991922109524375 0.08583017990763764 0.1099538243900753 2049.5983696898106 1402976.68240395 0.0371444834256722 0.037157182102756495 9.193826126506873e-07 6.036503713878362 -0.0548684643256121 DSSKGEDSAEET(ph)EAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK ddPTM_KYSE-520_SHP099_60min_R1 1 DSSKGEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK 49 2 Q12906;Q12906-5;Q12906-2;Q12906-3 Q12906 ILF3 Interleukin enhancer-binding factor 3 1 DS(0.244)S(0.244)KGEDS(0.181)AEET(0.33)EAKPAVVAPAPVVEAVSTPSAAFPSDATAEQGPILTK 184.64 4.6323e-17 947290000.0 521790.0 489730.0 438240.0 399210.0 410880.0 475620.0 423670.0 504050.0 650400.0 517860.0 True False 492845.2685374235 466202.63570028346 466489.6516087917 437150.79837313714 443213.91841259383 472651.4791577192 466498.6982207389 502301.56819615385 532303.75524975 513272.1632889838 0.960202605532575 0.9082951873191706 0.9088543758531232 0.8516939542794012 0.8635066347111725 0.9208593665571646 0.908872001223432 0.9786261639000023 1.0370789482110507 1.0 18.969364494241226 -7.364353496997527 2.4522658478472645 1.018590026705848 0.8993410380169642 0.7233479146373207 0.02952024538011498 0.16693566503618817 1.8928503461623873 0.022691406336251278 0.008852574808513852 4.3216192664750646e-08 7.364353496997527 -0.1192489886888839 DSSLCVSGETLAAGTSS(ph)PKTEGK ddPTM_KYSE-520_SHP099_60min_R1 1 DSSLCVSGETLAAGTSSPKTEGK 23 1 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 DSSLCVSGETLAAGT(0.009)S(0.391)S(0.599)PKT(0.001)EGK 142.4 5.6198e-07 439050000.0 142110.0 209780.0 166900.0 122290.0 141680.0 195600.0 128390.0 193270.0 190940.0 183150.0 True False 134226.87501073835 199701.85391380047 177658.64104944188 133912.40483217075 152829.40995107143 194379.18784586378 141368.9141656494 192599.59147955733 156270.10920569976 181527.43348854393 0.739430247159911 1.1001194148784321 0.9786875605259621 0.7376978909395635 0.8419080632278999 1.0707978629474255 0.7787743783342317 1.060994406069825 0.8608622190186028 1.0 17.46982806765555 DSSPSSSPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 DSSPSSSPSPK 11 0 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 DSSPS(0.163)S(0.025)S(0.025)PS(0.788)PK;DSSPS(0.021)S(0.021)S(0.121)PS(0.838)PK;DSSPSSS(0.001)PS(0.999)PK;DSSPSSSPS(1)PK;DSSPSSSPS(1)PK;DSSPSSSPS(1)PK 236.12 3.9169e-14 2468390000.0 5921890.0 6502750.0 4586010.0 5015480.0 4849940.0 6629120.0 5924970.0 5743030.0 7314800.0 5121970.0 True False 5593390.956704961 6190348.129173257 4881631.542475444 5492149.711240957 5231602.685616172 6587745.203132799 6523923.789734771 5723108.769363279 5986616.711102189 5076593.330632358 1.1018000837203616 1.2193901945661987 0.9615959413214159 1.081857330998155 1.0305341288711234 1.297670460106011 1.2850987591165055 1.1273522215832856 1.1792586723420833 1.0 22.275429264416594 -6.242643956795358 24.928334966544185 1.1925369692230299 1.0804653622058513 0.19314395653877925 0.09874050919078571 1212.4300564662904 1608044.4341939823 0.032704581786726195 0.03264647856428333 5.719473382586333e-07 6.242643956795358 -0.11207160701717855 DSSSEKDGRS(ph)PNKR ddPTM_KYSE-520_SHP099_60min_R1 4 DSSSEKDGRSPNKR 14 3 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 DSS(0.001)S(0.001)EKDGRS(0.998)PNKR;DSSSEKDGRS(1)PNKR;DSSSEKDGRS(0.999)PNKR;DS(0.004)S(0.004)S(0.004)EKDGRS(0.988)PNKR 98.796 0.0019334 5490410000.0 2530810.0 2294640.0 1791750.0 1671920.0 2133750.0 2351210.0 1627800.0 1614040.0 2557350.0 2168960.0 True False 2390420.9242553446 2184402.0500751412 1907249.071901361 1830818.7741189224 2301663.9856232256 2336535.226252932 1792353.9097970545 1608441.2719597672 2092999.705547276 2149744.7018253445 1.111955723033364 1.0161216111942823 0.8871979404260977 0.8516447430080313 1.070668523415309 1.08688963125202 0.8337519837937826 0.7482010634072235 0.9736038441076811 1.0 21.03573390854362 -6.778262954168653 24.99684537732246 0.8679059537889321 0.9954121639590955 0.22085975066238528 0.10224430969056028 364.6334347385491 541775.5993706309 0.044817907788818084 0.030305858405290653 1.666238042674686e-07 6.778262954168653 0.1275062101701634 DSSSSLTDPQVSYVKS(ph)PAAER ddPTM_KYSE-520_SHP099_60min_R1 3 DSSSSLTDPQVSYVKSPAAER 21 1 H7C3M7;O94887-3;O94887-2;O94887 H7C3M7 FARP2 FERM, RhoGEF and pleckstrin domain-containing protein 2 1 DSSSSLTDPQVS(0.029)Y(0.004)VKS(0.966)PAAER;DSSSSLTDPQVS(0.273)YVKS(0.727)PAAER;DSSSSLTDPQVS(0.255)YVKS(0.745)PAAER 121.02 5.5778999999999996e-05 2120120000.0 1983440.0 2158940.0 2011430.0 1702940.0 1817350.0 1935060.0 1776050.0 1973790.0 3000680.0 1874610.0 True False 1873414.6293103867 2055221.2817649932 2141089.99620179 1864786.9055924206 1960365.1056929685 1922982.5727659394 1955590.4665776265 1966943.38317605 2455832.152987113 1858002.4138245091 1.0082950459973585 1.1061456467833801 1.1523612565145025 1.0036514978223017 1.055092873457444 1.034973129452332 1.0525231033216165 1.0586333841877509 1.3217593985424552 1.0 20.825320945323742 DSSSTDS(ph)ANEKPALIPR ddPTM_KYSE-520_SHP099_60min_R1 2 DSSSTDSANEKPALIPR 17 1 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3;F2Z2S1;C9JKE4;F8VZ02;F8VT91;C9JGM8;C9JW67;F8W6C2 B8ZZZ7 SPATS2L SPATS2-like protein 1 DS(0.001)S(0.005)S(0.03)T(0.196)DS(0.768)ANEKPALIPR;DS(0.009)S(0.007)S(0.038)T(0.221)DS(0.725)ANEKPALIPR 158.52 7.5985e-08 891080000.0 481480.0 453110.0 445040.0 387490.0 422500.0 385350.0 385640.0 456110.0 519870.0 349320.0 True False 454771.34459341585 431341.9154680237 473727.9904891769 424316.933096883 455748.34630383714 382944.887711675 424624.254683706 454527.8608668741 425474.7128562225 346225.29656684725 1.313512759185726 1.2458417098495937 1.3682651013274882 1.2255515044810086 1.316334626103335 1.1060569274080705 1.2264391391797735 1.3128095069134165 1.228895511319388 1.0 18.401351611903547 -13.582473416554999 0.2091958523947546 2.8715223862809986e-09 1.2978118865598942 0.588035528842757 0.06693617636319092 88.86634067625135 1.0381202964533354 37.44871985666623 0.14939939676363226 2.6153305293050548e-14 13.582473416554999 1.2978118836883719 DSSVPGS(ph)PSSIVAK ddPTM_KYSE-520_SHP099_60min_R1 3 DSSVPGSPSSIVAK 14 0 Q08495;Q08495-2;A0A087WT94;E5RJ61;E5RGQ0 Q08495 DMTN Dematin 1 DSSVPGS(0.963)PS(0.032)S(0.005)IVAK;DSSVPGS(0.971)PS(0.024)S(0.005)IVAK;DSSVPGS(0.969)PS(0.031)SIVAK 213.83 8.807000000000001e-14 1200980000.0 1549450.0 1833510.0 1259730.0 1197490.0 1379350.0 1959850.0 1685410.0 2249610.0 2494520.0 2417820.0 True False 1463498.9197480017 1745425.4274453823 1340934.2114392642 1311299.0895615038 1487896.9975720672 1947617.849180555 1855787.6908164758 2241806.6279729228 2041578.0497318648 2396399.995835499 0.6107072785391808 0.728353125721336 0.5595619319686032 0.5471954147222082 0.6208884160231003 0.8127265283613568 0.7744064822406495 0.935489330607899 0.851935425337903 1.0 21.192437305432716 -6.679874465071873 1.1742524863787531 0.9270188550894924 0.6098652655358514 0.804181967393507 0.06643886570933928 0.21770775077643953 0.6069062737760491 0.04415306888031004 0.027125860603708977 2.0899001393340152e-07 6.679874465071873 -0.31715358955364104 DSTDS(ph)PGSENR ddPTM_KYSE-520_SHP099_60min_R1 1 DSTDSPGSENR 11 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 DS(0.002)T(0.011)DS(0.986)PGS(0.002)ENR 90.434 0.044739 0.0 127040.0 93627.0 91176.0 106380.0 107530.0 112950.0 123440.0 100960.0 115900.0 110920.0 True False 119992.8379520385 89129.0183830078 97053.3508467579 116490.32321568661 115991.99923799219 112245.03715332487 135918.5198583047 100609.79332424125 94855.48160123923 109937.3350944541 1.0914657686485223 0.8107256584528945 0.8828061073462735 1.0596065760153492 1.0550737757863253 1.0209910678377647 1.236327219879657 0.9151558316180852 0.8628140887692329 1.0 16.746321888099104 -3.9305175176166576 21.163463586044546 0.9883133127780115 4.140409952409349 0.07084634379919197 0.11663027934744666 1947.767579237178 657492.3789838554 0.030043360089764097 31329.140575915328 0.0001173498347538505 3.9305175176166576 3.1520966396313375 DSTLIMQLLR ddPTM_KYSE-520_SHP099_60min_R1 3 DSTLIMQLLR 10 0 P31947;P31947-2;P31946-2;P31946;P61981;Q04917;P27348;P62258;P62258-2;K7EM20;P63104;E7EX29;B0AZS6;B7Z2E6;H0YB80;P63104-2 P31947;P31946-2;P61981;P27348;P62258;P63104 SFN;YWHAB;YWHAG;YWHAH;YWHAQ;YWHAE;YWHAZ 14-3-3 protein sigma;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein eta;14-3-3 protein theta;14-3-3 protein epsilon;14-3-3 protein zeta/delta 0 ;; 224.36 1.5283e-08 1573515000.0 447824.0 703196.0 545791.0 547199.0 787162.0 829419.0 621490.0 610111.0 567455.0 540259.0 False True 422982.310004988 669413.4086412856 580973.5611564767 599204.6284386222 849107.1710608796 824242.2883636436 684316.2743578898 607994.6673419785 464419.4763764557 535472.7255751421 0.7899231647151962 1.2501353975074643 1.0849732085466408 1.1190198862043381 1.5857150710129413 1.5392796850266073 1.277966629622223 1.1354353607626642 0.8673074354583246 1.0 19.030453567284265 -7.5792955793446195 4.076240083980009 0.9378961263984184 1.2490311545801043 0.23246972608938488 0.21513571898856343 0.3369740856620332 11.389925688958328 0.17297109833325838 0.060484165085482 2.6345377181182144e-08 7.5792955793446195 0.3111350281816859 DSTPSRPAQQPLSRPIQS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 DSTPSRPAQQPLSRPIQSPGR 21 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 DSTPSRPAQQPLS(0.009)RPIQS(0.991)PGR;DS(0.001)T(0.006)PS(0.004)RPAQQPLS(0.052)RPIQS(0.937)PGR 76.79899999999999 0.0074343000000000005 1427790000.0 453180.0 344140.0 406390.0 319390.0 411390.0 323550.0 293340.0 318440.0 449470.0 314080.0 True False 428041.20200806716 327606.99783532915 432586.54964699066 349744.7295718948 443764.0525110905 321530.6044352213 322993.6699225142 317335.405964455 367857.5782166432 311297.4955505424 1.375022954332025 1.0523920125214716 1.3896242527809086 1.1235064032666144 1.425530429424996 1.0328724420560507 1.0375723368775795 1.0193959492132576 1.181691415686053 1.0 18.247934444525796 -6.292246333420034 24.888325848846968 1.0544727596511816 1.259097288268619 0.45830593937956354 0.11849998584384418 605.8258665870972 489432.70427021047 0.03877339880122147 0.03419848384032608 5.102155217748326e-07 6.292246333420034 0.20462452861743752 DSWLDNIDWVK ddPTM_KYSE-520_SHP099_60min_R1 2 DSWLDNIDWVK 11 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 0 ; 149.31 0.00045052 280430000.0 726440.0 786800.0 576050.0 530070.0 801400.0 825370.0 638710.0 560550.0 638590.0 612860.0 False True 686142.9250777616 749000.9469891221 613183.1047125879 580447.6934286436 864465.6206577404 820218.5596745437 703277.0400088935 558605.5828833538 522638.15354387666 607430.5371978655 1.129582533408682 1.2330643606499176 1.0094703297948429 0.9555787170436042 1.4231514020444247 1.3503084047408769 1.1577900631291553 0.9196205140759866 0.8604080986031025 1.0 19.212359912998984 -7.245528421885367 5.422286616019357 0.9156148336642228 1.1837017720496372 0.42345909067678733 0.13536996014295669 0.17938326897359322 18.160961276701812 0.07602252913251263 0.04040192591899626 5.6816120770931526e-08 7.245528421885367 0.2680869383854144 DSYLILETLPTEYDSR ddPTM_KYSE-520_SHP099_60min_R1 1 DSYLILETLPTEYDSR 16 0 E9PM69;P17980;R4GNH3;E9PKD5;E9PMD8;E9PLG2;E9PN50 E9PM69 PSMC3 26S protease regulatory subunit 6A 0 151.55 4.8969e-05 44523000.0 15546.0 24595.0 40215.0 21420.0 32574.0 31362.0 25928.0 26862.0 30171.0 23039.0 False True 14683.63238981731 23413.419282152347 42807.32324627505 23455.750359842175 35137.38847929278 31166.258124856802 28549.055272894762 26768.82199163792 24692.706949016298 22834.892384070772 0.6430348846338492 1.0253352145633559 1.8746452808394536 1.0271890037986122 1.5387586632028105 1.364852419738043 1.250238222835247 1.1722771249104458 1.0813585863991855 1.0 14.478952370170763 -7.703143148120181 1.8052892586830573 1.0081207393663685 1.2690806973823363 0.06396600841635569 0.3097444332890973 0.9821834228757562 6.029189148845742 0.29302155054446877 0.08802268554444156 1.9808740008682513e-08 7.703143148120181 0.26095995801596783 DSYSSS(ph)RSDLYSSGR ddPTM_KYSE-520_SHP099_60min_R1 1 DSYSSSRSDLYSSGR 15 1 P38159;P38159-2;H3BUY5 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 DSYS(0.062)S(0.019)S(0.591)RS(0.327)DLYSSGR 238.21 1.6674999999999998e-18 397420000.0 605020.0 634640.0 624760.0 581070.0 618050.0 577500.0 590470.0 588880.0 820810.0 558740.0 True False 571458.3345225308 604150.9417859393 665033.0292513444 636294.7180949346 666687.0187765372 573895.6082872518 650160.4700318632 586837.3127256255 671771.5949362654 553789.9982931416 1.0319043974861328 1.0909387017606262 1.2008758397606845 1.1489819607722858 1.203862512561368 1.0363054769065503 1.174019884858428 1.059674812716626 1.213043928216038 1.0 19.0789794726285 -8.914849618315975 12.479144387034832 0.9999972075316514 1.1292200510133463 0.2511924619730056 0.06673492795172821 0.0 0.0 0.062446679904842164 0.015145544542164713 1.2166071981859581e-09 8.914849618315975 0.12922284348169488 DSYSSSRS(ph)DLYSSGR ddPTM_KYSE-520_SHP099_60min_R1 1 DSYSSSRSDLYSSGR 15 1 P38159;P38159-2;H3BUY5 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 DSYS(0.003)S(0.001)S(0.035)RS(0.959)DLYS(0.001)SGR 177.66 2.0959e-06 0.0 255000.0 255850.0 241470.0 227380.0 232260.0 209380.0 226130.0 239440.0 320010.0 242290.0 True False 240854.6416701025 243558.58196132086 257035.5425656603 248990.12683571 250537.54062137145 208073.18175443247 248989.42721612527 238609.4385257161 261904.25079562186 240143.49909876788 1.0029613234337114 1.0142210090024066 1.0703414563803992 1.0368389224365537 1.043282627102592 0.8664535268924964 1.0368360090968742 0.9936119004728051 1.0906156184886107 1.0 17.873537228484075 -3.294040045433194 13.775351010977227 1.0146409076061549 1.0212275079090103 0.0 0.057821358023104265 0.0 0.0 0.013317445891232876 0.0 0.0005081125883459809 3.294040045433194 0.006586600302855405 DSYVGDEAQS(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 4 DSYVGDEAQSKR 12 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 1 DSYVGDEAQS(1)KR;DSYVGDEAQS(1)KR;DSYVGDEAQS(1)KR;DSYVGDEAQS(1)KR 125.22 0.00016051 307220000.0 1120390.0 1055410.0 1004840.0 972650.0 1094750.0 1007800.0 868210.0 1036080.0 1252800.0 1012970.0 True False 1058239.7332579074 1004706.5193972935 1069613.5942008453 1065090.363562115 1180900.5967245593 1001509.9463755707 955977.139713049 1032486.0803028907 1025323.1005179682 1003995.8738787355 1.0540279704234359 1.0007078171704158 1.0653565637362723 1.060851335421682 1.1762006472819337 0.9975239664147614 0.9521723789758461 1.0283768162453588 1.0212423449080914 1.0 19.937321909582064 DSYVGDEAQSK ddPTM_KYSE-520_SHP099_60min_R1 6 DSYVGDEAQSK 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ;;;;; 315.8 2.2438e-28 6818480000.0 9255700.0 12693080.0 11745170.0 7123620.0 11770660.0 11927550.0 10193960.0 10826950.0 12971040.0 11923800.0 False True 8742267.870219478 12083285.384098504 12502282.451136451 7800646.703005548 12696943.976105856 11853105.736149989 11224464.960262187 10789393.837479133 10615826.109309204 11818164.408576021 0.7397314479628939 1.0224333463604631 1.0578869965680957 0.6600556933651132 1.0743583806375325 1.0029565782270393 0.9497638188310354 0.9129500542105891 0.898263532499656 1.0 23.49450263845014 DSYVGDEAQSKR ddPTM_KYSE-520_SHP099_60min_R1 11 DSYVGDEAQSKR 12 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ;;;;;;;;;; 196.5 1.321e-07 45004630000.0 17351110.0 19582900.0 13235190.0 9647930.0 14422550.0 15493460.0 9932360.0 12064940.0 15769910.0 12991630.0 False True 16388609.339719731 18642108.089467824 14088351.524452727 10564866.366444075 15557522.631915765 15396759.569132838 10936419.879292237 12023089.539118167 12906491.87108022 12876534.265535207 1.2727500274343848 1.44775820147231 1.094110514050432 0.8204743721081498 1.2082072948430214 1.195722331151105 0.8493294588252834 0.9337209291865642 1.0023265270706572 1.0 23.618241006830004 -4.886980067006306 5.199559600732759 1.005569661673001 1.3564032577804042 0.5582403824696096 0.12553973338887933 0.1496277120471293 6.155114396518336 0.03463195949217852 0.0751761241287829 1.2972388095244911e-05 4.886980067006306 0.35083359610740317 DT(ph)GKTPVEPEVAIHR ddPTM_KYSE-520_SHP099_60min_R1 1 DTGKTPVEPEVAIHR 15 1 P60866;P60866-2;E5RIP1;E5RJX2 P60866 RPS20 40S ribosomal protein S20 1 DT(0.5)GKT(0.5)PVEPEVAIHR 77.39 0.033832999999999995 323830000.0 117180.0 119030.0 127210.0 121780.0 91803.0 94468.0 100360.0 152690.0 163620.0 115410.0 True False 110679.79180746131 113311.62013232752 135410.16014319664 133353.9345855079 99027.37381238167 93878.39017087458 110505.36821921161 152160.35402811406 133910.73252454487 114387.55718762128 0.9675859379173698 0.9905939327515406 1.183784001271166 1.1658080464711515 0.8657180575152466 0.8207045633197056 0.9660610903505702 1.3302177069708456 1.170675690756305 1.0 16.803570602077397 -9.917410527348535 4.713987822893099 0.9999996043862324 1.0501863081559393 0.01020133717361893 0.15109385724701352 6.967516735161517e-07 1.600221948799186e-07 0.16225218328651428 0.03935162448753937 1.209454327115663e-10 9.917410527348535 0.05018670376970691 DT(ph)MAFS(ph)LT(ph)VPTLALK ddPTM_KYSE-520_SHP099_60min_R1 1 DTMAFSLTVPTLALK 15 0 C9JLZ4 C9JLZ4 INO80D 3 DT(0.897)MAFS(0.748)LT(0.748)VPT(0.607)LALK 50.831 0.047618 11249000.0 14936.0 10924.0 9588.4 6185.8 11697.0 11941.0 10164.0 12148.0 14712.0 11589.0 True False 14107.470305822171 10399.194642741706 10206.483605982434 6773.696572171418 12617.487353173932 11866.471789710957 11191.476311080767 12105.861423364511 12040.67165933935 11486.330476105564 1.2281964492636905 0.9053539478404028 0.8885765238266885 0.5897180641165077 1.0984785244879953 1.0330951050377821 0.9743299946281219 1.0539363679765026 1.0482609467302855 1.0 13.48763035512535 DT(ph)PGGRSDGDTDSVSTMVVHDVEEITGTQPPYGGGTMVVQR ddPTM_KYSE-520_SHP099_60min_R1 1 DTPGGRSDGDTDSVSTMVVHDVEEITGTQPPYGGGTMVVQR 41 1 Q8N4C8;Q8N4C8-4 Q8N4C8 MINK1 Misshapen-like kinase 1 1 DT(0.435)PGGRS(0.435)DGDT(0.077)DS(0.019)VS(0.013)T(0.022)MVVHDVEEITGTQPPYGGGTMVVQR 118.95 8.172600000000001e-05 46574000.0 13067.0 15309.0 8786.8 14768.0 11165.0 10495.0 13331.0 13406.0 20567.0 13202.0 True False 12342.147461581302 14573.532660722527 9353.211187377077 16171.546279838893 12043.62197983988 10429.496812077414 14678.627578022213 13359.497714983927 16832.551251878234 13085.040551000586 0.9432257709463135 1.1137552538656916 0.7148018495565042 1.235880486331568 0.9204115136593084 0.7970549859151863 1.1217869383599097 1.020974880659606 1.286396567612554 1.0 13.675630774904965 DT(ph)SQSDKDLDDALDKLSDSLGQR ddPTM_KYSE-520_SHP099_60min_R1 2 DTSQSDKDLDDALDKLSDSLGQR 23 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;A0A0C4DGD1 P20810-6 CAST Calpastatin 1 DT(0.468)S(0.468)QS(0.063)DKDLDDALDKLSDSLGQR;DT(0.488)S(0.488)QS(0.024)DKDLDDALDKLSDSLGQR 129.01 4.4124e-05 638290000.0 243262.0 215942.0 227354.0 226026.0 252248.0 231923.0 205152.0 241462.0 300170.0 231599.0 True False 229767.77192922562 205567.8221844498 242009.6026192619 247507.44308280485 272098.48250520806 230475.48252953147 225890.7662505748 240624.42467965445 245666.6946699218 229547.2130412957 1.0009608432400798 0.8955361272343916 1.0542911822489616 1.0782419869252697 1.1853704468904065 1.0040439153058625 0.9840710469002161 1.0482567899282922 1.0702229463606086 1.0 17.80843139066958 -4.781086411990173 24.637495176171402 1.056195716204015 0.9482485169410306 0.3393146500348785 0.05837164682082647 199.2144753401234 249816.36864031866 0.016038902129687796 0.03346780847720537 1.6554405461029807e-05 4.781086411990173 -0.10794719926298435 DTCIQS(ph)PSKECQK ddPTM_KYSE-520_SHP099_60min_R1 3 DTCIQSPSKECQK 13 1 Q03188;Q03188-2 Q03188 CENPC Centromere protein C 1 DT(0.009)CIQS(0.979)PS(0.011)KECQK;DTCIQS(0.999)PS(0.001)KECQK;DTCIQS(1)PSKECQK 273.02 2.9008e-22 2575990000.0 2903780.0 2442500.0 2499190.0 2177690.0 2265670.0 2333500.0 2190490.0 2535860.0 2930500.0 2458970.0 True False 2742701.534858083 2325158.6337327566 2660291.7862453847 2384657.002853629 2443965.3391011027 2318935.7609321256 2411926.1063222485 2527063.693534173 2398395.071893283 2437185.438849714 1.1253561141217732 0.9540343531800226 1.0915426228301162 0.9784470909932578 1.0027818565396438 0.9514810502177466 0.9896358594119177 1.0368778892454236 0.9840839493219937 1.0 21.216784595326228 -4.247526650034436 24.44075657070437 1.0005443879630598 1.1253562294310988 0.48878662557530006 0.038800430237386434 1540.6999924519423 2706515.59157724 0.009396715698901563 0.1848783228944505 5.655530514427024e-05 4.247526650034436 0.12481184146803903 DTCVQS(ph)PISSFPCTDLK ddPTM_KYSE-520_SHP099_60min_R1 7 DTCVQSPISSFPCTDLK 17 0 A0A0J9YWL0;Q9Y4K1 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 DT(0.001)CVQS(0.87)PIS(0.061)S(0.061)FPCT(0.007)DLK;DTCVQS(1)PISSFPCTDLK;DTCVQS(1)PISSFPCTDLK;DTCVQS(1)PISSFPCTDLK;DTCVQS(1)PISSFPCTDLK;DTCVQS(0.996)PIS(0.002)S(0.002)FPCTDLK;DTCVQS(1)PISSFPCTDLK 293.52 1.1132e-37 5278264000.0 7755970.0 8078450.0 6460070.0 5530180.0 6168910.0 8211230.0 6965140.0 9001270.0 10786400.0 9354550.0 True False 7325730.882957115 7690349.1359993415 6876496.448677457 6055766.644490758 6654368.120703442 8159980.667768892 7669244.324415695 8970046.695282213 8827861.663016442 9271675.964729777 0.7901193819569193 0.8294454169078025 0.7416670378512169 0.6531469248415708 0.7177093058490406 0.8800976974184748 0.8271691497405793 0.9674676648973728 0.9521322462733123 1.0 23.144398715883575 -6.963567731642976 1.196373060692432 0.984420333935059 0.74999177515186 0.7491311645210765 0.05444589572618537 0.26908975282932474 0.7329670548885064 0.04499232500194347 0.021502614350638487 1.0875075190468212e-07 6.963567731642976 -0.23442855878319901 DTCYS(ph)PKPSVYLSTPSS(ph)ASK ddPTM_KYSE-520_SHP099_60min_R1 4 DTCYSPKPSVYLSTPSSASK 20 1 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 2 DT(0.437)CY(0.003)S(0.56)PKPS(0.035)VY(0.001)LS(0.152)T(0.118)PS(0.073)S(0.564)AS(0.058)K;DT(0.406)CY(0.01)S(0.584)PKPS(0.008)VYLS(0.223)T(0.154)PS(0.096)S(0.507)AS(0.012)K;DT(0.139)CY(0.028)S(0.832)PKPS(0.001)VYLS(0.067)T(0.045)PS(0.249)S(0.6)AS(0.038)K;DT(0.476)CY(0.001)S(0.523)PKPS(0.002)VY(0.002)LS(0.036)T(0.033)PS(0.04)S(0.762)AS(0.125)K 95.255 0.00082215 3790560000.0 3336910.0 3163840.0 2749160.0 2825880.0 2863420.0 2558100.0 2592340.0 2950370.0 3414750.0 2700490.0 True False 3151804.95033483 3011844.3773793406 2926375.2524115257 3094450.7855682005 3088754.8633688386 2542133.9490209837 2854399.0260003097 2940135.855091532 2794717.4788423795 2676565.7595494264 1.1775555818458223 1.1252644799156195 1.0933320961649573 1.1561273152089941 1.153999244124232 0.9497745160757518 1.0664408359168502 1.098473237431863 1.0441430287566866 1.0 21.351951667450802 -6.2268018559773815 24.998566260495103 1.0400880312371663 1.1385311290568827 0.619474847810048 0.0426310766130846 475.476506359993 343160.80583829846 0.014470519808567072 0.01446971354312588 5.931959046096586e-07 6.2268018559773815 0.09844309781971639 DTCYS(ph)PKPSVYLSTPSSASK ddPTM_KYSE-520_SHP099_60min_R1 2 DTCYSPKPSVYLSTPSSASK 20 1 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 DT(0.045)CY(0.001)S(0.925)PKPS(0.029)VYLSTPSSASK;DT(0.027)CYS(0.969)PKPS(0.004)VYLSTPSSASK 135.58 1.9327e-06 1001600000.0 1165770.0 1182190.0 971770.0 987690.0 914750.0 1293230.0 1163890.0 1481710.0 1675040.0 1283690.0 True False 1101102.4141951199 1125395.8178966334 1034411.8490869759 1081559.760640174 986735.6207844616 1285158.4718706885 1281547.359671764 1476570.2938437131 1370894.960322171 1272317.5052957071 0.8654305309893585 0.8845243527755072 0.813013925204591 0.8500706436392242 0.7755419670620096 1.010092580288752 1.0072543640542868 1.1605360200562 1.0774786597025974 1.0 20.27902730767934 -6.473414149078889 2.7967176691220024 1.0745276391931575 0.8398840504324301 0.8087689405754592 0.05179314421421193 0.11219429890873173 1.7440803275853258 0.020797002539433347 0.016953347358701614 3.361908203612019e-07 6.473414149078889 -0.23464358876072744 DTDGGPKEEES(ph)PV ddPTM_KYSE-520_SHP099_60min_R1 1 DTDGGPKEEESPV 13 1 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 DTDGGPKEEES(1)PV 89.992 0.066988 0.0 416980.0 449290.0 411970.0 566800.0 603180.0 535000.0 526790.0 636950.0 783860.0 475580.0 True False 393849.28817097825 427705.43400196085 438526.2453753061 620668.501585366 650646.8343752628 531660.8665518267 580043.0741749551 634740.5691152483 641530.7835025655 471366.7311956412 0.8355474879866113 0.9073729766992005 0.9303292242601979 1.3167422741333794 1.3803410196660892 1.1279134299598255 1.2305558194649246 1.3465960304521334 1.3610014051591977 1.0 18.84649041199643 -5.209344806817563 5.349329438635489 1.2656936358297637 0.8862521680745333 0.6833750802582548 0.11241326410219703 0.11461335816460937 7.483688465650473 0.030392561447982077 0.05295229632339757 6.175259225804061e-06 5.209344806817563 -0.37944146775523035 DTDIVDEAIYYFK ddPTM_KYSE-520_SHP099_60min_R1 1 DTDIVDEAIYYFK 13 0 F8VR50;C9JZD1;O15145 F8VR50 ARPC3 Actin-related protein 2/3 complex subunit 3 0 161.62 7.998300000000001e-06 21393000.0 52310.0 64111.0 54801.0 37238.0 49149.0 59165.0 44950.0 42541.0 52860.0 55157.0 False True 49408.260022600305 61031.011327427084 58333.5601447002 40777.088323987045 53016.74668044333 58795.72928885758 49493.98466972461 42393.43520014405 43261.95649216137 54668.351891496684 0.903781773422832 1.1163865237525126 1.067044425639135 0.745899353339197 0.9697886408880335 1.0754984786362818 0.9053498588718766 0.7754657627924225 0.7913528576465187 1.0 15.738418262242512 -6.99822183932944 24.91866125552644 0.8381271364574739 0.9797985451863777 0.19395102792775376 0.11328339745665128 81.13080283793678 1136933.9622599534 0.04913008955481115 0.03286211213664499 1.0041027596217529e-07 6.99822183932944 0.1416714087289037 DTDSEEEIR ddPTM_KYSE-520_SHP099_60min_R1 4 DTDSEEEIR 9 0 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2;A0A590UJC0;G3V226 P0DP25 CALM2;CALM1 0 ;;; 171.53 0.00057793 541364000.0 1007022.0 1302300.0 2282190.0 686871.0 1242160.0 1395760.0 990474.0 930482.0 1626890.0 1399820.0 False True 951160.4822114129 1239735.5532078482 2429303.6190331057 752151.0133247045 1339910.9250763908 1387048.544109117 1090600.7780146992 927254.3751181322 1331487.7865594465 1387418.683843482 0.6855612464266883 0.8935554693363966 1.7509520718744775 0.5421225921803691 0.9657581670765141 0.9997332169887322 0.7860646470418532 0.6683306098699893 0.9596870808103192 1.0 20.403971787378943 DTDSEEEIREAFR ddPTM_KYSE-520_SHP099_60min_R1 2 DTDSEEEIREAFR 13 1 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2;A0A590UJC0;G3V226 P0DP25 CALM2;CALM1 0 ; 225.79 1.2372e-11 439650000.0 232120.0 310300.0 225850.0 194725.0 270910.0 191523.0 113167.0 180408.0 299940.0 213909.0 False True 219243.84088025172 295392.72223020415 240408.65237277676 213231.605453794 292229.0757329531 190327.63391515045 124607.02476348673 179782.20675554394 245478.45687209367 212013.9326786838 1.0341010994429558 1.3932703313318775 1.1339285552385199 1.0057433620504348 1.378348451164475 0.8977128602373512 0.5877303589869917 0.8479735481724758 1.1578411558646327 1.0 17.693799550291157 -6.371094234940631 7.512951667643067 0.8664593762731861 1.186595750267673 0.3933774292137193 0.17868515715613625 0.2721980923690153 16.660836304935064 0.06385584941515539 0.056205848017387865 4.2550607511893005e-07 6.371094234940631 0.3201363739944868 DTEAMKR ddPTM_KYSE-520_SHP099_60min_R1 1 DTEAMKR 7 1 P18206-2;P18206 P18206-2 VCL Vinculin 0 95.541 0.015222999999999999 405450000.0 402770.0 298280.0 157170.0 209630.0 475720.0 513410.0 338850.0 362460.0 387240.0 609730.0 False True 380427.5451979105 283950.1810725919 167301.42968089136 229553.17217244237 513156.45752345957 510205.6177502306 373104.26485731156 361202.7108588002 316926.97752600425 604328.2665627615 0.6295048010275419 0.4698608302530935 0.2768386635833731 0.37984847784478487 0.8491352894051111 0.8442524468566192 0.6173867507131795 0.5976928944813606 0.5244285185079793 1.0 19.204972897983897 -5.7513477725526245 24.99917919483369 0.7179009941005531 0.42963265021396807 0.4676795689232297 0.1556095849345483 205.06555698374956 507990.9664615248 0.04831967407547439 0.06164436528939418 1.7727693214105793e-06 5.7513477725526245 -0.288268343886585 DTEEPLPVKESDQTLAALLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 DTEEPLPVKESDQTLAALLSPK 22 1 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK;DTEEPLPVKESDQTLAALLS(1)PK 251.57 1.3113e-27 2164543000.0 2497210.0 3863580.0 3595970.0 1357047.0 1785586.0 2044928.0 1144524.0 1306735.0 4242350.0 1804389.0 True False 2358684.7832352845 3677967.8174481923 3827771.97995543 1486020.3388689433 1926101.4596054044 2032164.845824475 1260223.6553978163 1302202.2412792433 3472046.1809406145 1788403.5172534003 1.3188772894261092 2.0565648534938874 2.140329038177054 0.8309200493807729 1.0769948957400164 1.136301078710379 0.7046640443501512 0.7281367033314402 1.9414221384852364 1.0 20.770240857668657 -5.26454446479743 24.986038857516046 1.0375588826121036 1.8603878525306532 0.460086171192978 0.3858797412026864 223.7698225566501 1800637.3258418085 0.10653526866276641 0.1658867828556767 5.43820450368053e-06 5.26454446479743 0.8228289699185496 DTEEQNPETVNWEDRPS(ph)TPTILGYEVMEER ddPTM_KYSE-520_SHP099_60min_R1 1 DTEEQNPETVNWEDRPSTPTILGYEVMEER 30 1 E5RGS8;E5RH07;E5RGQ6;A0A0C4DGW2;P57768-2;P57768 E5RGS8 SNX16 Sorting nexin-16 1 DTEEQNPETVNWEDRPS(0.433)T(0.433)PT(0.133)ILGYEVMEER 132.81 1.5024e-05 215790000.0 242140.0 236140.0 203860.0 157450.0 173200.0 233860.0 197030.0 225290.0 260230.0 212870.0 True False 228708.0115058773 224795.47994663368 217001.14178753266 172414.0006609312 186829.854626804 232400.3929940378 216947.71522749367 224508.52157308106 212978.7918644559 210984.13741035413 1.0840057186908374 1.065461520974049 1.028518752409693 0.8171894000049594 0.8855161194579705 1.101506472697661 1.0282655269269871 1.0641014264329391 1.0094540493829747 1.0 17.68677501014803 -8.817462854254998 14.70157012039155 1.000007112381003 1.0071357699951935 0.0004761176934298117 0.0855814428984249 0.0 0.0 0.09129837610834629 0.02214310871423998 1.5224293425793603e-09 8.817462854254998 0.007128657614190459 DTEEQNPETVNWEDRPST(ph)PTILGYEVMEER ddPTM_KYSE-520_SHP099_60min_R1 1 DTEEQNPETVNWEDRPSTPTILGYEVMEER 30 1 E5RGS8;E5RH07;E5RGQ6;A0A0C4DGW2;P57768-2;P57768 E5RGS8 SNX16 Sorting nexin-16 1 DTEEQNPETVNWEDRPS(0.099)T(0.877)PT(0.024)ILGYEVMEER 129.37 0.00021273 215820000.0 281400.0 288130.0 231270.0 231990.0 241520.0 250660.0 272610.0 267520.0 286390.0 248780.0 True False 265790.18104300735 274287.8023080525 246178.0342450833 254038.25984966307 260526.2499391783 249095.53796239398 300168.0792172108 266592.03555963706 234388.7953043907 246576.00274791103 1.077923958864481 1.1123864417109268 0.9983860209493517 1.030263517206016 1.0565758509984826 1.010218087674407 1.2173450614498365 1.0811759156960201 0.9505742354985776 1.0 17.911672875145907 -7.755623001991807 24.994386453022425 0.9752871040009669 1.0725999931874826 0.3021398959849808 0.059418694753990815 164.95990084422098 708895.9545256317 0.0445448898882885 0.01582137853453066 1.7554036538836857e-08 7.755623001991807 0.0973128891865157 DTGIFLDLMHLK ddPTM_KYSE-520_SHP099_60min_R1 3 DTGIFLDLMHLK 12 0 B1AHC9;P12956-2;P12956 B1AHC9 XRCC6 X-ray repair cross-complementing protein 6 0 ;; 138.45 6.5895e-05 312070800.0 583337.0 524170.0 374965.0 368851.0 706541.0 484709.0 347290.0 380160.0 352682.0 308395.0 False True 550978.1337565207 498988.08640478895 399135.8438652123 403906.4881409028 762141.7570316213 481683.7513373252 382397.4624237737 378841.31369001104 288643.8391897173 305662.8602276793 1.8025681410758023 1.6324786270504286 1.305804190826153 1.3214117274177328 2.4934064821088313 1.5758661388515867 1.2510432642648734 1.2394090450106474 0.9443209390068358 1.0 18.221581741674992 -6.841422498362892 2.9212336276522226 1.091709443132981 1.6927533745485335 0.45641913526549427 0.3163584451344975 0.2771193626573055 4.76790672314462 0.15702676147551184 0.10143876930665008 1.440713088485508e-07 6.841422498362892 0.6010439314155525 DTGKT(ph)PVEPEVAIHR ddPTM_KYSE-520_SHP099_60min_R1 1 DTGKTPVEPEVAIHR 15 1 P60866;P60866-2;E5RIP1;E5RJX2 P60866 RPS20 40S ribosomal protein S20 1 DT(0.009)GKT(0.991)PVEPEVAIHR 119.38 0.00036048 693760000.0 165060.0 183920.0 142480.0 132830.0 155770.0 136170.0 181200.0 177280.0 202880.0 181260.0 True False 155903.79276104766 175084.2071304519 151664.48877606037 145454.12326320415 168028.21278993794 135320.11252030332 199517.4643415814 176665.05705746304 166042.10618860569 179654.17741814614 0.8677994300025692 0.974562404540933 0.8442024057312087 0.80963396094408 0.9352869785980612 0.7532255273159887 1.110564013644967 0.9833618098747244 0.9242318134475755 1.0 17.454862956508723 -6.763605832592506 24.99999997466984 1.0031528737153217 0.8689917276636657 0.4792950471045154 0.07158819497319513 54.37215399027033 627417.4068340622 0.028832741912542172 0.020520729999265394 1.723432059191283e-07 6.763605832592506 -0.13416114605165597 DTHEDHDT(ph)S(ph)TENTDESNHDPQFEPIVSLPEQEIK ddPTM_KYSE-520_SHP099_60min_R1 2 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK 34 0 P43487-2;P43487;C9JJ34 P43487-2 RANBP1 Ran-specific GTPase-activating protein 2 DT(0.071)HEDHDT(0.464)S(0.492)T(0.489)ENT(0.405)DES(0.079)NHDPQFEPIVSLPEQEIK;DT(0.067)HEDHDT(0.604)S(0.645)T(0.605)ENT(0.077)DES(0.002)NHDPQFEPIVSLPEQEIK 194.73 1.0717e-15 1018150000.0 162125.0 230466.0 290310.0 674190.0 181454.0 234650.0 201317.0 232870.0 263200.0 237124.0 True False 153131.60306182527 219394.06742348135 309023.8471124236 738264.8148973848 195733.39746796843 233185.46231100208 221668.08702458136 232062.2283222668 215409.51473206322 235023.26583968065 0.6515593361139098 0.9334993564983449 1.3148649177704046 3.1412414096951005 0.8328256216194634 0.992180333627343 0.9431750777209885 0.9874010876887666 0.9165454916238088 1.0 17.84244405612107 DTHEDHDT(ph)STENT(ph)DESNHDPQFEPIVSLPEQEIK ddPTM_KYSE-520_SHP099_60min_R1 1 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK 34 0 P43487-2;P43487;C9JJ34 P43487-2 RANBP1 Ran-specific GTPase-activating protein 2 DT(0.009)HEDHDT(0.406)S(0.406)T(0.406)ENT(0.734)DES(0.04)NHDPQFEPIVSLPEQEIK 88.986 0.00026744 222840000.0 98067.0 145110.0 151000.0 333340.0 103860.0 105680.0 103200.0 108860.0 124310.0 97700.0 True False 92627.02801828214 138138.69778544933 160733.7016085423 365020.53337767476 112033.19111743572 105020.41191999431 113632.46313494041 108482.3900681151 101738.43760008653 96834.45400944992 0.9565503205010358 1.4265449131563088 1.659881322745482 3.769531589882801 1.156955881699943 1.084535592153445 1.1734714084704934 1.120287104190503 1.0506429621646654 1.0 16.563232833915375 -5.953579321006504 24.99997699969518 1.1012129989032402 1.9656520528233494 0.2733690375315231 0.6837444398035905 177.86995944388946 95791.46798570447 0.22298373879151562 0.25283970986323445 1.1128091270338404e-06 5.953579321006504 0.8644390539201092 DTHEDHDT(ph)STENTDESNHDPQFEPIVSLPEQEIK ddPTM_KYSE-520_SHP099_60min_R1 3 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK 34 0 P43487-2;P43487;C9JJ34 P43487-2 RANBP1 Ran-specific GTPase-activating protein 1 DT(0.044)HEDHDT(0.279)S(0.214)T(0.214)ENT(0.214)DES(0.034)NHDPQFEPIVSLPEQEIK;DT(0.006)HEDHDT(0.311)S(0.311)T(0.311)ENT(0.052)DES(0.008)NHDPQFEPIVSLPEQEIK;DT(0.068)HEDHDT(0.288)S(0.288)T(0.288)ENT(0.06)DES(0.008)NHDPQFEPIVSLPEQEIK 178.19 2.1642e-10 2122160000.0 217215.0 407171.0 549540.0 1323830.0 292445.0 394919.0 257554.0 191886.0 372109.0 332180.0 True False 205165.65094263258 387609.89398386935 584964.2276950885 1449646.4051759958 315458.7577155639 392454.1640332348 283590.0718048105 191220.39225252907 304543.38570453384 329237.143632129 0.6231546315803088 1.1772969772115467 1.7767261045998335 4.403046354926918 0.9581505726706209 1.1920105966893606 0.8613550363007584 0.5807983575091027 0.9249970472493633 1.0 18.32876758027835 -5.948516627490186 24.999998074218624 0.9038475454315155 2.015992600969113 0.24406230042499943 0.927231312022058 157.42769857336964 76445.01540367614 0.3063947763601163 0.3474189696126892 1.1258573632571638e-06 5.948516627490186 1.1121450555375976 DTHEDHDTS(ph)T(ph)ENTDESNHDPQFEPIVSLPEQEIK ddPTM_KYSE-520_SHP099_60min_R1 1 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK 34 0 P43487-2;P43487;C9JJ34 P43487-2 RANBP1 Ran-specific GTPase-activating protein 2 DT(0.009)HEDHDT(0.572)S(0.662)T(0.63)ENT(0.106)DES(0.021)NHDPQFEPIVSLPEQEIK 178.81 6.6628e-11 692420000.0 109880.0 185510.0 206960.0 514310.0 116670.0 117820.0 116610.0 114570.0 165530.0 139740.0 True False 103784.73735965045 176597.82114381323 220300.9727477079 563189.8677670601 125851.26523850582 117084.64167689007 128398.07680392855 114172.58341083904 135473.92467172662 138502.01231607483 0.7493373967939452 1.27505599514901 1.5905976314983787 4.066293755225787 0.9086601929746783 0.845364191602442 0.9270484569632956 0.8243388056361686 0.9781368689616016 1.0 17.079547411991648 DTHEDHDTSTENT(ph)DESNHDPQFEPIVSLPEQEIK ddPTM_KYSE-520_SHP099_60min_R1 1 DTHEDHDTSTENTDESNHDPQFEPIVSLPEQEIK 34 0 P43487-2;P43487;C9JJ34 P43487-2 RANBP1 Ran-specific GTPase-activating protein 1 DT(0.006)HEDHDT(0.219)S(0.219)T(0.219)ENT(0.336)DES(0.002)NHDPQFEPIVSLPEQEIK 185.79 5.144e-15 734690000.0 96564.0 132180.0 120710.0 189790.0 92818.0 127230.0 101570.0 84425.0 118280.0 117520.0 True False 91207.40242443838 125829.874393775 128491.1597428288 207827.58453755587 100122.24853782161 126435.91037642791 111837.68682767359 84132.14937994318 96803.33359615688 116478.86422917663 0.783038219234215 1.0802807464382542 1.1031285426171182 1.7842514683921293 0.8595743888850705 1.0854837159783806 0.9601543384525854 0.7222954133070009 0.8310806792011005 1.0 16.829708667615908 -6.691790514603974 1.6469131000663986 0.8360369412010108 1.1536913731060405 0.17313231551648933 0.25865254327295906 0.6239324114602846 3.4605826979579084 0.14266497148598375 0.09238818380596876 2.0333375709693194e-07 6.691790514603974 0.31765443190502973 DTHPGS(ph)PGSPGPALRPLPAR ddPTM_KYSE-520_SHP099_60min_R1 1 DTHPGSPGSPGPALRPLPAR 20 1 Q8N0Y2-2;Q8N0Y2 Q8N0Y2-2 ZNF444 Zinc finger protein 444 1 DTHPGS(0.594)PGS(0.406)PGPALRPLPAR 92.565 0.00093276 352250000.0 177840.0 172000.0 172100.0 190220.0 131750.0 147580.0 132760.0 130340.0 179380.0 132890.0 True False 167974.86068474938 163736.86182273654 183193.84136973595 208298.45160827183 142117.9754450428 146658.89847797845 146180.67641273938 129887.88096158467 146809.11380181435 131712.6979868556 1.2753125799724532 1.2431364957619866 1.390859379313739 1.5814606700187643 1.0789998050091236 1.1134757750738233 1.1098449781001951 0.9861454737989419 1.114616252234582 1.0 17.00703491220728 -5.841934841206046 11.133468720142705 1.0704186113261358 1.364593994476054 0.717881963743819 0.09376303090070945 0.27354179527470507 36.23937116223394 0.03078355304946999 0.03492116450633206 1.4390144626780904e-06 5.841934841206046 0.2941753831499181 DTIIDVVGAPLT(ph)PNSR ddPTM_KYSE-520_SHP099_60min_R1 10 DTIIDVVGAPLTPNSR 16 0 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 DTIIDVVGAPLT(1)PNSR;DTIIDVVGAPLT(1)PNSR;DTIIDVVGAPLT(0.997)PNS(0.003)R;DTIIDVVGAPLT(0.972)PNS(0.028)R;DTIIDVVGAPLT(0.984)PNS(0.016)R;DTIIDVVGAPLT(0.999)PNS(0.001)R;DTIIDVVGAPLT(0.974)PNS(0.026)R;DTIIDVVGAPLT(1)PNSR;DTIIDVVGAPLT(1)PNSR;DTIIDVVGAPLT(0.992)PNS(0.008)R 315.05 1.8062999999999998e-46 7520590000.0 7853140.0 11542780.0 7839020.0 6526110.0 6679480.0 10008900.0 7146600.0 9470690.0 10937360.0 11028250.0 True False 7417510.669353534 10988247.522734 8344335.772075463 7146349.532253482 7205117.074957525 9946430.742487067 7869048.072094627 9437838.386865675 8951411.132408373 10930548.284848679 0.6786037146586028 1.005278713965822 0.7633959024399462 0.6537960718914125 0.6591725215600447 0.9099663148896436 0.7199133901638096 0.8634368689398577 0.818935235372989 1.0 23.38186243374771 -8.405355796766676 0.7775838419396922 1.000962030367618 0.7738259870280576 0.28162792648001167 0.10780718127677429 1.909960703677243 2.0664257256087537 0.11331545319910372 0.03888838537719492 3.932277906733677e-09 8.405355796766676 -0.2271360433395605 DTLRT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 5 DTLRTPPR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DT(0.002)LRT(0.998)PPR;DT(0.001)LRT(0.999)PPR;DTLRT(1)PPR;DT(0.002)LRT(0.998)PPR;DTLRT(1)PPR 94.465 0.0099765 17618910000.0 2131170.0 1882700.0 1809890.0 1574470.0 1792200.0 1966570.0 1748430.0 1937110.0 2090280.0 1920630.0 True False 2012949.7517179304 1792252.2660096851 1926558.4053263867 1724107.1554183352 1933235.9437768934 1954295.9071678983 1925178.367432404 1930390.6175348724 1710737.843670737 1903614.7124275274 1.0574354876418122 0.9414994821741892 1.01205269782224 0.9057017389930336 1.015560518184687 1.026623662030717 1.011327741304005 1.014065821687835 0.8986786204699847 1.0 20.86031007910553 -4.237759287773767 23.28477494177683 0.9831832223185065 1.0574357051116665 0.20253858977050843 0.04547461293518529 4560.709538098147 4484396.104693339 0.011154306787660042 0.5853366269834475 5.784165519561236e-05 4.237759287773767 0.07425248279315999 DTLRT(ph)PPRER ddPTM_KYSE-520_SHP099_60min_R1 7 DTLRTPPRER 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 DT(0.007)LRT(0.993)PPRER;DT(0.002)LRT(0.998)PPRER;DTLRT(1)PPRER;DT(0.002)LRT(0.998)PPRER;DTLRT(1)PPRER;DTLRT(1)PPRER;DTLRT(1)PPRER 126.1 0.00033501 27307310000.0 2845830.0 2614160.0 2703290.0 2153110.0 2361430.0 2235030.0 2073720.0 2087350.0 3193370.0 2188180.0 True False 2687966.136878542 2488571.8296658425 2877548.3988169264 2357740.927043872 2547261.1063012364 2221080.348727717 2283351.855156871 2080109.470041154 2613534.506306722 2168794.427578281 1.2393826278316191 1.1474447730136559 1.3267962893237668 1.087120520535721 1.1745055565942037 1.0241082882197459 1.0528207865724308 0.9591086382326449 1.2050632706692475 1.0 21.0484618808089 -5.817820431631001 1.3924704216364479 1.0468829844538203 1.2237247452716515 0.4537692253254789 0.08197575482813696 0.3667587580376705 1.4860779517179414 0.030531723074671526 0.040443573340634593 1.5211763627171288e-06 5.817820431631001 0.1768417608178312 DTLS(ph)NPQSPQPSPYNSPKPQHK ddPTM_KYSE-520_SHP099_60min_R1 1 DTLSNPQSPQPSPYNSPKPQHK 22 1 A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5;Q96PU5-3 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 DT(0.16)LS(0.84)NPQSPQPSPYNSPKPQHK 119.32 7.975300000000001e-05 441920000.0 255310.0 254040.0 209090.0 334480.0 250430.0 288420.0 281400.0 275850.0 332980.0 266540.0 True False 241147.44535213328 241835.53707818603 222568.27595582855 366268.8786349208 270137.4162482133 286619.8637960331 309846.65819934354 274893.14073387405 272519.22574271454 264178.6629649823 0.9128195390408882 0.9154241843908572 0.842491492151017 1.386443835108178 1.022555770463646 1.0849470603688591 1.172867841489586 1.0405576954953095 1.0315716745785706 1.0 18.011154422937906 DTLSNPQS(ph)PQPSPYNSPKPQHK ddPTM_KYSE-520_SHP099_60min_R1 1 DTLSNPQSPQPSPYNSPKPQHK 22 1 A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5;Q96PU5-3 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 DT(0.001)LS(0.018)NPQS(0.978)PQPS(0.003)PYNSPKPQHK 132.35 1.0424e-05 632460000.0 209860.0 224570.0 172660.0 200880.0 193140.0 213320.0 199420.0 194070.0 232320.0 163280.0 True False 198218.6474544616 213781.32011355806 183789.9398657678 219971.57480322578 208339.01918372346 211988.59075296353 219579.31975164596 193396.81646627857 190136.54431061153 161833.46622991766 1.2248310072828281 1.3209957439200977 1.135673258117431 1.3592465138867569 1.28736672356591 1.309918125660055 1.3568226947551656 1.1950359895988305 1.174890143182644 1.0 17.304150454092344 -8.030017404602068 1.5137135083930036 1.0030963667110842 1.2829484606791564 0.6338293377614099 0.06528879033757751 0.2737881401642365 1.409539762960002 0.06106375661975243 0.01799397470843599 9.332169008415626e-09 8.030017404602068 0.2798520939680722 DTLSNPQSPQPSPYNS(ph)PKPQHK ddPTM_KYSE-520_SHP099_60min_R1 1 DTLSNPQSPQPSPYNSPKPQHK 22 1 A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5;Q96PU5-3 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 DTLSNPQSPQPS(0.091)PY(0.001)NS(0.908)PKPQHK 151.19 2.9124e-07 1154300000.0 696660.0 701100.0 639230.0 774270.0 557360.0 715840.0 659390.0 614570.0 807380.0 674200.0 True False 658014.8810427205 667418.1036274453 680435.7886041632 847856.3880072365 601221.0610554008 711372.1770326338 726047.5762262448 612438.200111716 660780.144393516 668227.1125196631 0.9847174242325553 0.9987893204614712 1.0182702495240956 1.2688147070391247 0.8997256318864335 1.064566468053481 1.0865281617930167 0.9165120490283827 0.9888556330824905 1.0 19.3499789939312 -7.257969334201129 24.994843609350845 0.9645128808487149 1.0467077792984196 0.13005251752289382 0.09162068535036068 609.0454781696286 4387008.945544028 0.04505446667626638 0.024664014812401325 5.5211642318257704e-08 7.257969334201129 0.08219489844970473 DTMDLESSS(ph)SEEEKEDDDDALVPDSK ddPTM_KYSE-520_SHP099_60min_R1 2 DTMDLESSSSEEEKEDDDDALVPDSK 26 1 Q5JRA6-2;Q5JRA6;Q5JRA6-3 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 DTMDLES(0.008)S(0.049)S(0.471)S(0.471)EEEKEDDDDALVPDSK;DTMDLES(0.051)S(0.043)S(0.453)S(0.453)EEEKEDDDDALVPDSK 247.11 2.0649999999999998e-29 799590000.0 494510.0 551910.0 371640.0 425360.0 496310.0 612700.0 593430.0 533840.0 722200.0 435800.0 True False 467078.54451875424 525395.4151662011 395596.50904502394 465786.0865108522 535366.7733823853 608875.9120304746 653419.6957186792 531988.233639193 591066.6851804563 431939.1510472693 1.0813526474418602 1.2163644205262245 0.9158616626575066 1.078360425030976 1.239449519878779 1.4096335341545416 1.5127586701377116 1.231627724297154 1.368402664466442 1.0 18.720468563062894 -5.887813310632229 3.5784174500018833 1.3315470055158138 1.0715512469594586 0.36031342687986756 0.1435790781688385 0.23248567693023073 5.75408745284534 0.045382567234780825 0.052368655879168315 1.2947522946210632e-06 5.887813310632229 -0.25999575855635526 DTPRPDHPPHDGHS(ph)PASR ddPTM_KYSE-520_SHP099_60min_R1 9 DTPRPDHPPHDGHSPASR 18 1 Q9C0J8 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 1 DTPRPDHPPHDGHS(1)PASR;DTPRPDHPPHDGHS(0.949)PAS(0.051)R;DTPRPDHPPHDGHS(1)PASR;DTPRPDHPPHDGHS(1)PASR;DTPRPDHPPHDGHS(1)PASR;DTPRPDHPPHDGHS(0.999)PAS(0.001)R;DTPRPDHPPHDGHS(0.992)PAS(0.008)R;DTPRPDHPPHDGHS(0.988)PAS(0.012)R;DTPRPDHPPHDGHS(0.924)PAS(0.076)R 167.85 1.3244000000000001e-08 7277689000.0 968335.0 979122.0 1003001.0 1265237.0 911292.0 904110.0 993612.0 928234.0 1172023.0 715154.0 True False 914619.5272220344 932083.5094279152 1067656.0493183425 1385484.7440726259 983005.4958577909 898467.1141274236 1094055.997678628 925014.1729054431 959213.1674955054 708818.291941392 1.2903441370241315 1.3149823022696254 1.5062478796845449 1.954640222782489 1.3868229799282181 1.2675563319149115 1.5434928953118623 1.3050088907439301 1.3532567914807947 1.0 19.43505630935771 -8.372439330264104 0.6650391133112858 0.9941010486745576 1.4817276461592412 0.34841522480900433 0.18880340023287104 1.6317373657464935 1.3789266119437429 0.22478351110481284 0.08060713679529989 4.241902379725906e-09 8.372439330264104 0.4876265974846836 DTQS(ph)PSTCSEGLLGWSQK ddPTM_KYSE-520_SHP099_60min_R1 8 DTQSPSTCSEGLLGWSQK 18 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DT(0.235)QS(0.765)PSTCSEGLLGWSQK;DTQS(1)PSTCSEGLLGWSQK;DTQS(0.984)PS(0.013)T(0.003)CSEGLLGWSQK;DT(0.019)QS(0.778)PS(0.196)T(0.007)CSEGLLGWSQK;DTQS(1)PSTCSEGLLGWSQK;DTQS(0.977)PS(0.022)TCSEGLLGWSQK;DTQS(0.999)PS(0.001)TCSEGLLGWSQK;DTQS(0.993)PS(0.006)T(0.001)CSEGLLGWSQK 440.97 1.7113999999999993e-118 8565280000.0 5480320.0 4792610.0 4217260.0 3986440.0 4319370.0 4854050.0 4612390.0 5327720.0 5961450.0 5057390.0 True False 5176315.724852926 4562365.821745728 4489111.327454573 4365310.059033106 4659279.845146529 4823754.073431579 5078655.393788454 5309239.382819202 4879000.955924994 5012585.459189885 1.0326638352594795 0.9101821522825628 0.895568038490876 0.8708699521581046 0.9295162911595615 0.9623285453593395 1.013180809611423 1.0591818186531747 0.9733501793929553 1.0 22.2571234974999 -6.561257352361299 2.598014250778469 1.0168021820503752 0.9221437843275642 0.4365011961884693 0.044420262056573526 0.25462211006046903 3.483832451897223 0.019319266384906393 0.014778066512399657 2.7462663001321924e-07 6.561257352361299 -0.09465839772281104 DTQSPS(ph)TCSEGLLGWSQK ddPTM_KYSE-520_SHP099_60min_R1 2 DTQSPSTCSEGLLGWSQK 18 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DT(0.002)QS(0.237)PS(0.581)T(0.176)CS(0.004)EGLLGWSQK;DTQS(0.042)PS(0.479)T(0.479)CSEGLLGWSQK 333.41 5.414199999999999e-59 7020700000.0 1801120.0 1684200.0 1438110.0 1528680.0 1471380.0 1681320.0 1741190.0 1901400.0 2080820.0 1802670.0 True False 1701208.2831562944 1603288.5039642602 1530812.8716573566 1673965.2875855993 1587169.2349929973 1670826.2582260114 1917206.4775768125 1894804.487190096 1702995.5412035433 1786699.7462560365 0.9521511864100914 0.897346354542162 0.8567823859969301 0.9369035234338238 0.8883245426764357 0.9351466365443698 1.0730434599289824 1.0605052646145996 0.953151498886205 1.0 20.76886578009824 -6.61544924774602 5.564377123021711 1.0260330521556635 0.905388861684259 0.6601943409770407 0.039207706337815194 0.12198369919576003 5.881592937087436 0.01522760240406576 0.0116995522279698 2.424101231826383e-07 6.61544924774602 -0.12064419047140451 DTS(ph)PSSGSAVSSSK ddPTM_KYSE-520_SHP099_60min_R1 13 DTSPSSGSAVSSSK 14 0 F8W0Q9;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8;F8WF16;B7Z8L1;F8W6A0;Q8NEY8-5;Q8NEY8-6;Q8NEY8-3;Q8NEY8-7 F8W0Q9 PPHLN1 Periphilin-1 1 DTS(0.999)PSS(0.001)GSAVSSSK;DT(0.002)S(0.998)PSSGSAVSSSK;DT(0.483)S(0.515)PS(0.002)SGSAVSSSK;DT(0.001)S(0.854)PS(0.137)S(0.008)GSAVSSSK;DTS(1)PSSGSAVSSSK;DTS(1)PSSGSAVSSSK;DT(0.001)S(0.998)PSSGSAVSSSK;DTS(1)PSSGSAVSSSK;DTS(0.997)PS(0.001)S(0.001)GSAVSSSK;DTS(0.997)PS(0.001)S(0.001)GSAVSSSK;DTS(0.999)PS(0.001)SGSAVSSSK;DTS(0.995)PS(0.005)SGSAVSSSK;DT(0.016)S(0.972)PS(0.012)SGSAVSSSK 366.12 2.7313999999999996e-67 79137350000.0 33343510.0 31942350.0 27897090.0 25001810.0 25536670.0 29581200.0 27876050.0 29984630.0 35846860.0 29189130.0 True False 31493879.03166074 30407791.559555132 29695381.058322154 27377974.505331736 27546260.64522325 29396572.758211005 30694033.178030603 29880620.316995263 29337973.84980322 28930537.016999524 1.088603333327515 1.0510621196449819 1.026437256967377 0.9463348187848879 0.9521517222109331 1.0161087829423159 1.0609562193745263 1.0328401543129833 1.0140832792894334 1.0 24.78608976745041 -4.639658172580693 2.4212234051115 1.0047887385462468 1.0842275393444383 0.40813495994792226 0.03265978683030878 0.36511538692975665 3.9856418142445116 0.010277127405129653 0.04309385129284678 2.2926714740634835e-05 4.639658172580693 0.07943880079819143 DTS(ph)QSDKDLDDALDKLSDSLGQR ddPTM_KYSE-520_SHP099_60min_R1 3 DTSQSDKDLDDALDKLSDSLGQR 23 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;A0A0C4DGD1 P20810-6 CAST Calpastatin 1 DT(0.299)S(0.681)QS(0.02)DKDLDDALDKLSDSLGQR;DT(0.035)S(0.855)QS(0.11)DKDLDDALDKLSDSLGQR;DT(0.006)S(0.982)QS(0.012)DKDLDDALDKLSDSLGQR 175.21 6.0622e-11 2658831000.0 1114548.0 1019575.0 931736.0 880150.0 992948.0 942059.0 929014.0 1038976.0 1358066.0 1098541.0 True False 1052721.8006436466 970593.0865867235 991797.1933903096 963799.1913732537 1071087.3584987056 936179.2603419562 1022927.8014229032 1035372.0347548218 1111475.4484578806 1088808.7813919666 0.9668564569233311 0.8914265784538286 0.9109011704721609 0.8851868278846017 0.983724026480935 0.8598197188905069 0.9394926077976344 0.9509218261733436 1.0208178584277547 1.0 20.054319176858765 -7.537875996788999 2.316938072480423 1.0108299118534012 0.9167657245227417 0.49813410978029715 0.03578439640136934 0.24358000295387525 2.4233860427399114 0.028508656367864246 0.009337492686668376 2.898170978378229e-08 7.537875996788999 -0.09406418733065947 DTS(ph)SDKDLDDALDKLSDSLGQR ddPTM_KYSE-520_SHP099_60min_R1 2 DTSSDKDLDDALDKLSDSLGQR 22 2 E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 E7EVY3 CAST 1 DT(0.069)S(0.517)S(0.414)DKDLDDALDKLSDSLGQR;DT(0.002)S(0.689)S(0.309)DKDLDDALDKLSDSLGQR 222.46 7.1146e-20 1115460000.0 532970.0 495370.0 469410.0 458040.0 450050.0 434220.0 451260.0 476460.0 601210.0 471950.0 True False 503405.0916506457 471571.6816344706 499668.91968255537 501571.983885253 485466.37456578057 431509.8719142692 496877.7646731908 474807.2714666 492045.41927075956 467768.8901715443 1.0761833508552323 1.0081296373975015 1.0681961331359862 1.0722645187056201 1.0378338208591558 0.9224851865544589 1.0622291800785884 1.0150467067026936 1.0518985541990884 1.0 18.835436390236424 -6.00923711841051 24.944706579025556 1.0106985455413005 1.0537965711309243 0.23364156686104032 0.039246475398166655 696.8946483275901 1881953.7916431637 0.012485956185409573 0.013402002241101822 9.789553442246095e-07 6.00923711841051 0.043098025589623834 DTSLYRPALEELRR ddPTM_KYSE-520_SHP099_60min_R1 2 DTSLYRPALEELRR 14 2 Q13200;C9JPC0;H7C2Q3 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 ; 254.45 1.9090999999999996e-19 2955200000.0 1804450.0 1511990.0 1193400.0 1012820.0 1832060.0 1583550.0 1183660.0 1231710.0 1307210.0 1216630.0 False True 1704353.5614181042 1439351.7308567392 1270328.4735075114 1109078.1082845647 1976232.6990045162 1573666.4770619536 1303315.9042083682 1227437.4854932749 1069853.6160824483 1205851.6047238165 1.4134024076772387 1.1936391884525481 1.0534699862994024 0.9197467614919197 1.6388689049820062 1.305024988893538 1.080826114177519 1.0179009429393282 0.887218304384546 1.0 20.201620945632083 -7.021801435047457 3.0084846633432454 0.9662782588088579 1.243177338330109 0.3256369462528734 0.18552936986871493 0.36074319671031 6.5844112632909555 0.10174116180986646 0.057774146859084115 9.510395216143519e-08 7.021801435047457 0.27689907952125115 DTSPDKGELVS(ph)DEEEDT ddPTM_KYSE-520_SHP099_60min_R1 2 DTSPDKGELVSDEEEDT 17 1 Q9UPU7 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 DTSPDKGELVS(0.964)DEEEDT(0.036);DTSPDKGELVS(1)DEEEDT 159.88 7.6501e-08 290670000.0 753270.0 651400.0 640030.0 604000.0 723770.0 659310.0 638550.0 631850.0 805120.0 704920.0 True False 711484.6114934828 620105.7662286661 681287.3578842084 661403.978400778 780726.5813120198 655195.0017313731 703100.8656474451 629658.2598248986 658930.5034235514 698674.9572194609 1.0183342112690013 0.8875454312782597 0.9751134642002192 0.9466547663780431 1.1174389080998444 0.9377679777430032 1.0063347174279698 0.9012177312476888 0.9431145293169205 1.0 19.414261904755726 DTSQS(ph)DKDLDDALDKLSDSLGQR ddPTM_KYSE-520_SHP099_60min_R1 3 DTSQSDKDLDDALDKLSDSLGQR 23 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;A0A0C4DGD1 P20810-6 CAST Calpastatin 1 DT(0.208)S(0.231)QS(0.56)DKDLDDALDKLSDSLGQR;DT(0.216)S(0.216)QS(0.568)DKDLDDALDKLSDSLGQR;DT(0.319)S(0.291)QS(0.39)DKDLDDALDKLSDSLGQR 160.57 1.7202000000000002e-10 636800000.0 816940.0 769950.0 712320.0 701910.0 748010.0 726520.0 652690.0 719420.0 912630.0 692460.0 True False 771622.7096704845 732960.4462814885 758237.2869522973 768619.3153630625 806874.1314052857 721985.51919109 718670.2748405457 716924.4999338904 746919.3975301029 686325.3431257284 1.1242812427066828 1.067948974379075 1.1047782142198928 1.1199051922846723 1.175643795594874 1.0519581222266319 1.0471276953980877 1.0445840403747944 1.0882876539694881 1.0 19.388533102798554 -6.4118215294062955 11.773288047866304 1.0488348579909856 1.1150059617003947 0.5620523398804458 0.031730760228760396 0.5121730295822028 51.52974604887326 0.011364581521265552 0.010020011549467618 3.874168187256491e-07 6.4118215294062955 0.06617110370940904 DTSQSDKDLDDALDKLS(ph)DSLGQR ddPTM_KYSE-520_SHP099_60min_R1 7 DTSQSDKDLDDALDKLSDSLGQR 23 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;A0A0C4DGD1 P20810-6 CAST Calpastatin 1 DTSQSDKDLDDALDKLS(0.968)DS(0.032)LGQR;DTSQSDKDLDDALDKLS(0.973)DS(0.027)LGQR;DTSQSDKDLDDALDKLS(0.998)DS(0.002)LGQR;DTSQSDKDLDDALDKLS(0.996)DS(0.004)LGQR;DTSQSDKDLDDALDKLS(1)DSLGQR;DTSQSDKDLDDALDKLS(0.797)DS(0.203)LGQR;DTSQSDKDLDDALDKLS(0.96)DS(0.04)LGQR 273.96 5.4889e-38 6788856000.0 5487960.0 4892550.0 4340100.0 4563660.0 4851450.0 4653770.0 4419890.0 4647950.0 5708800.0 4542340.0 True False 5183531.918822968 4657504.554132733 4619869.790405523 4997388.874285593 5233231.514025457 4624724.09520167 4866695.615169504 4631827.346289687 4672225.827136794 4502098.401487042 1.1513590900436226 1.034518604167861 1.026159221415414 1.110013249074022 1.1623982968246367 1.0272374530228225 1.0809838393496765 1.0288152175349599 1.037788473391332 1.0 22.102166159165094 -7.419323872621552 1.0009639912982726 1.0064481348098877 1.0865419241296443 0.30016112733600675 0.045325956850093795 0.7513716325248226 1.3616119123581318 0.04294034514967124 0.0162678548209461 3.807817516749197e-08 7.419323872621552 0.08009378931975664 DTSQSDKDLDDALDKLSDS(ph)LGQR ddPTM_KYSE-520_SHP099_60min_R1 1 DTSQSDKDLDDALDKLSDSLGQR 23 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;A0A0C4DGD1 P20810-6 CAST Calpastatin 1 DTSQSDKDLDDALDKLS(0.065)DS(0.935)LGQR 186.43 3.6359000000000006e-15 2292400000.0 745740.0 620170.0 590320.0 548840.0 588120.0 625230.0 519410.0 601290.0 723630.0 624060.0 True False 704372.3156041652 590376.1023058521 628372.9717453949 601001.5885852365 634401.6980549416 621327.7076527071 571917.0317530957 599204.2653321412 592237.0332278225 618531.3139113327 1.1387819820309661 0.9544805396715667 1.0159113332061196 0.9716591142083888 1.0256581741080353 1.0045210221026502 0.9246371507636891 0.9687533223548935 0.9574891681437497 1.0 19.23848710970477 -4.255572015501865 24.71478647207499 0.9806396736796176 1.1387820632665175 0.7197951613136913 0.029655291264529007 307.06260447103625 1293381.5116021999 0.0076271667108088375 0.06601707606999194 5.55172549763183e-05 4.255572015501865 0.15814238958689997 DTSQSDKDLDDALDKLSDSLGQR ddPTM_KYSE-520_SHP099_60min_R1 2 DTSQSDKDLDDALDKLSDSLGQR 23 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;A0A0C4DGD1 P20810-6 CAST Calpastatin 0 ; 134.56 8.4285e-07 131922000.0 379125.0 364669.0 289211.0 236383.0 370411.0 333785.0 259862.0 295850.0 330339.0 294633.0 False True 358094.18048304965 347149.7538606712 307854.0038139613 258848.76924885987 399560.2383497058 331701.72400374117 286131.3869687198 294823.7654019091 270357.7647685222 292022.78084100527 1.226254264998653 1.1887762758128118 1.0542122875734667 0.8863992340028864 1.3682502344474639 1.1358761910576405 0.9798255675282638 1.009591664570953 0.925810527486625 1.0 18.15572139328311 -6.758915231910848 8.342096213061808 0.9793540816425557 1.140022867168932 0.3201043605838323 0.11738973855519544 0.15620836140190641 97.86122916329035 0.04909972897913052 0.035677093782246164 1.7421468824338013e-07 6.758915231910848 0.16066878552637642 DTSS(ph)DKDLDDALDKLSDSLGQR ddPTM_KYSE-520_SHP099_60min_R1 3 DTSSDKDLDDALDKLSDSLGQR 22 2 E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 E7EVY3 CAST 1 DT(0.003)S(0.148)S(0.85)DKDLDDALDKLSDSLGQR;DT(0.309)S(0.309)S(0.383)DKDLDDALDKLSDSLGQR;DT(0.001)S(0.139)S(0.861)DKDLDDALDKLSDSLGQR 203.82 1.7291999999999998e-14 987190000.0 409404.0 358718.0 354210.0 340977.0 381380.0 383702.0 337408.0 376437.0 442146.0 335890.0 True False 386693.5439933597 341484.6488333048 377042.9433560386 373383.35156152677 411392.4362446338 381307.17349096993 371516.49342474807 375131.2279080559 361863.4319936284 332914.2759184659 1.1615408889466334 1.0257434827364924 1.132552643817474 1.1215600488486475 1.2357308352417664 1.1453614370816465 1.1159524246888597 1.1268102783310179 1.0869567878856972 1.0 18.34479121140696 -8.172311071610569 1.5205606880943434 1.000035725338642 1.133804282079737 0.41644838783323335 0.048393871477092315 0.7094422112159555 3.2222690234959654 0.04883266944370533 0.014240904065001088 6.724947966575126e-09 8.172311071610569 0.1337685567410949 DTSSDKDLDDALDKLS(ph)DSLGQR ddPTM_KYSE-520_SHP099_60min_R1 3 DTSSDKDLDDALDKLSDSLGQR 22 2 E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 E7EVY3 CAST 1 DTSSDKDLDDALDKLS(0.837)DS(0.163)LGQR;DTSSDKDLDDALDKLS(0.842)DS(0.158)LGQR;DTSSDKDLDDALDKLS(1)DSLGQR 216.71 1.128e-19 752075000.0 1221894.0 1009820.0 940049.0 962823.0 1035802.0 1016596.0 930414.0 965567.0 1201134.0 975866.0 True False 1154113.104034701 961306.7314292771 1000646.0626715792 1054329.408436709 1117313.7244927995 1010251.04727686 1024469.3270855865 962217.673442033 983038.3437240977 967220.5864522585 1.1932263644924677 0.9938857225478696 1.0345582762479493 1.0900609676888326 1.155179842264399 1.044488776838835 1.059188918676054 0.9948275366753968 1.0163538261006813 1.0 19.88348542586474 -7.007050328879437 1.9137269250223061 1.003261428988883 1.0833854387396213 0.3122328157107088 0.05418620460234773 0.4807658014222301 3.4640129835389066 0.03338787086146973 0.017041042541592027 9.838970787382529e-08 7.007050328879437 0.0801240097507383 DTTIINHS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 DTTIINHSR 9 0 Q8IY63;Q8IY63-2 Q8IY63 AMOTL1 Angiomotin-like protein 1 1 DTTIINHS(1)R;DTTIINHS(1)R 138.89 0.00028943 1028900000.0 1266340.0 986220.0 912590.0 770630.0 806440.0 759800.0 771710.0 776990.0 1108760.0 800210.0 True False 1196093.5958137962 938840.510853601 971417.0115956276 843870.4435016422 869902.2399840634 755057.8063665 849721.9779638071 774294.8030408283 907437.1335650553 793120.7619539585 1.5080850901785252 1.1837295855685868 1.2248034072420606 1.0639873320459485 1.0968093154451581 0.9520086254031663 1.071365192698277 0.9762634395463939 1.144134887264158 1.0 19.59718102436065 -1.0000000000001457 0.5915797034387119 1.029649845601348 28.915993385066994 0.8302950846239269 0.06322025537003735 58.94545199402209 0.4708745609843142 0.027161550376413744 2118.985407878353 0.09999999999996646 1.0000000000001457 27.886343539465646 DTTLIRHS(ph)PQPS(ph)PSSSFNEGLLTGGHR ddPTM_KYSE-520_SHP099_60min_R1 2 DTTLIRHSPQPSPSSSFNEGLLTGGHR 27 1 Q9Y2J4-3;Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4 Q9Y2J4-3 AMOTL2 Angiomotin-like protein 2 2 DT(0.281)T(0.33)LIRHS(0.388)PQPS(0.727)PS(0.134)S(0.114)S(0.026)FNEGLLTGGHR;DT(0.058)T(0.073)LIRHS(0.869)PQPS(0.982)PS(0.018)SSFNEGLLTGGHR 226.74 1.2418000000000002e-22 880160000.0 276210.0 324550.0 258520.0 276780.0 246020.0 194610.0 209305.0 210103.0 391750.0 191530.0 True False 260888.08068901583 308958.13084051834 275184.6128466251 303085.0879830583 265380.374337681 193395.36680308578 230463.59201994885 209374.20173140898 320618.07521385193 189833.1932080853 1.3743017028799798 1.6275242786537045 1.4496127268163372 1.5965863654352175 1.3979661293838366 1.0187647562304651 1.214032109586476 1.1029377855004727 1.6889463312267368 1.0 17.53437275072503 -6.0235120719032205 8.68711327005188 1.2112752219637921 1.51373004695586 0.367641553349748 0.19104587509868748 0.303690848086664 103.38702630931782 0.05994255543923671 0.06187563156576715 9.473008524101843e-07 6.0235120719032205 0.302454824992068 DTTLIRHS(ph)PQPSPSSSFNEGLLTGGHR ddPTM_KYSE-520_SHP099_60min_R1 1 DTTLIRHSPQPSPSSSFNEGLLTGGHR 27 1 Q9Y2J4-3;Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4 Q9Y2J4-3 AMOTL2 Angiomotin-like protein 2 1 DT(0.008)T(0.008)LIRHS(0.984)PQPSPSSSFNEGLLTGGHR 192.89 1.3218e-15 692370000.0 95547.0 164980.0 134760.0 255350.0 130900.0 62217.0 97870.0 96650.0 123410.0 93748.0 True False 90246.81744177754 157054.11315997154 143446.84522362356 279618.3872262231 141201.0852808812 61828.68062477565 107763.65471915326 96314.7437082797 101001.85491293299 92917.4656548403 0.9712578448600462 1.6902539479862602 1.543809274313231 3.0093199944229974 1.5196398684118189 0.6654150561364869 1.1597782393189884 1.0365623193604874 1.0870061317440975 1.0 16.50366218439509 -6.008109172859221 24.93153388881735 1.0126488510311566 1.837934067293706 0.3850423696853815 0.487859682091659 406.3899322248908 1249443.922558683 0.16001901649024933 0.17340371148905934 9.815011824367945e-07 6.008109172859221 0.8252852162625492 DTTS(ph)PMELAALEK ddPTM_KYSE-520_SHP099_60min_R1 5 DTTSPMELAALEK 13 0 Q6VY07-2;Q6VY07 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 DT(0.003)T(0.025)S(0.972)PMELAALEK;DTTS(1)PMELAALEK;DTT(0.003)S(0.997)PMELAALEK;DTT(0.183)S(0.817)PMELAALEK;DTTS(0.999)PMELAALEK 293.25 2.7672000000000002e-30 1455080000.0 3631190.0 3742890.0 2875860.0 2454910.0 2771150.0 3545570.0 2894730.0 3476500.0 4059870.0 3625130.0 True False 3429760.6521021947 3563075.9462075736 3061242.5371386954 2688223.9083043956 2989223.739313324 3523440.7824675897 3187357.55824231 3464440.832921196 3322699.9489941536 3593014.1685084645 0.9545636313273878 0.9916676581564056 0.8519984596691644 0.7481807146394677 0.8319543422658456 0.9806364843616088 0.88709852195363 0.9642157448990405 0.924766725975221 1.0 21.77676319372537 -6.264475224679854 24.99641545823308 0.9450916682983982 0.8737189584780976 0.23136665000194867 0.06844272894712694 510.32019792522294 4201837.663752766 0.0265097246281362 0.024406000205735134 5.439071592609351e-07 6.264475224679854 -0.07137270982030064 DVDASPS(ph)PLSVQDLK ddPTM_KYSE-520_SHP099_60min_R1 5 DVDASPSPLSVQDLK 15 0 Q8IWZ8 Q8IWZ8 SUGP1 SURP and G-patch domain-containing protein 1 1 DVDASPS(1)PLSVQDLK;DVDASPS(1)PLSVQDLK;DVDASPS(1)PLSVQDLK;DVDASPS(1)PLSVQDLK;DVDASPS(1)PLSVQDLK 353.92 1.7637999999999998e-55 1541220000.0 2260760.0 2498040.0 1866485.0 1614206.0 1678630.0 2401050.0 1783352.0 2467650.0 2935120.0 2610220.0 True False 2135351.1360866735 2378030.4087655186 1986801.609581588 1767619.6529112707 1810728.6309017995 2386064.1563257235 1963630.6239982783 2459090.2981038415 2402176.1963540036 2587095.4815204307 0.8253855148909046 0.9191892706518722 0.7679660931624946 0.6832448456337779 0.6999079252527773 0.9222945860983216 0.7590097226888034 0.9505216624856224 0.928522435106357 1.0 21.30290186964525 -7.42696198879654 1.3212904323192665 0.9893870640137797 0.7915598869435381 0.46169973721801705 0.07852204824714439 0.4369998711857902 1.3401262659614666 0.07442870913825803 0.02608755634234197 3.741433333715449e-08 7.42696198879654 -0.19782717707024167 DVDDFFEHER ddPTM_KYSE-520_SHP099_60min_R1 2 DVDDFFEHER 10 0 G3V5X9;A0A0A0MRI2;Q9UNH7-2;Q9UNH7 G3V5X9 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed 0 ; 149.31 5.6615e-05 254230000.0 312283.0 274965.0 206339.0 176712.0 290438.0 290884.0 212252.0 222104.0 241707.0 245523.0 False True 294960.0394692735 261755.26866912044 219639.94209407305 193506.65534959966 313293.8182338316 289068.485058059 233708.50353989733 221333.57306346332 197819.1017376247 243347.8572340036 1.2120921992982234 1.0756423814219833 0.9025760267240283 0.795185367765632 1.2874319987645007 1.1878817769087253 0.9603885819925791 0.9095357385893424 0.812906692444806 1.0 17.892660545656938 -6.988381062889977 23.38264428199931 0.9037251211749138 1.0663140314391082 0.22786915928587737 0.14243653097808748 170.28152608832295 342682.37478559616 0.0649719239341959 0.043751323163108494 1.0271146816740045e-07 6.988381062889977 0.16258891026419442 DVDEIEAWISEK ddPTM_KYSE-520_SHP099_60min_R1 2 DVDEIEAWISEK 12 0 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 191.52 5.8826e-07 144460000.0 150604.0 184911.0 266612.0 104615.0 179354.0 171102.0 135308.0 154261.0 238997.0 179813.0 False True 142249.69589836904 176027.59800293055 283798.23611428257 114557.57814635323 193468.13941533354 170034.0889509358 148986.25311882296 153725.904595788 195601.1694240842 178219.99671239694 0.79816910853121 0.9876983573678078 1.5924040026342432 0.6427874551654317 1.0855579788139225 0.9540685225425564 0.8359682183096995 0.8625626048229798 1.0975265011352018 1.0 17.4432996942331 DVDELPSLQPS(ph)VGSPSRPSSSR ddPTM_KYSE-520_SHP099_60min_R1 1 DVDELPSLQPSVGSPSRPSSSR 22 1 O43815-2;O43815 O43815-2 STRN Striatin 1 DVDELPS(0.006)LQPS(0.527)VGS(0.439)PS(0.017)RPS(0.004)S(0.004)S(0.004)R 54.658 0.036348 2933400000.0 1040600.0 1223300.0 927420.0 783440.0 875570.0 1129400.0 784420.0 934960.0 1117200.0 890600.0 True False 982875.843615328 1164530.8317892656 987202.9771244648 857897.9020501749 944472.3776881691 1122350.9956703426 863716.828801454 931716.8419813046 914344.6423201412 882709.9768763151 1.1134753988999584 1.3192677802399408 1.1183774999552216 0.971891022559931 1.069969075267978 1.2714833015052756 0.9784831387744445 1.0555186486941184 1.0358381192832702 1.0 19.75157997838989 -1.000001090355843 0.17460752548593061 0.9883200746484126 1.9075456414627385 0.2258415800319592 0.0986655544548798 88.04683787691032 0.9700300895050409 0.25052075302957305 21.30273144815625 0.09999974893660415 1.000001090355843 0.9192255668143259 DVDELPSLQPSVGS(ph)PSRPSSSR ddPTM_KYSE-520_SHP099_60min_R1 6 DVDELPSLQPSVGSPSRPSSSR 22 1 O43815-2;O43815 O43815-2 STRN Striatin 1 DVDELPSLQPS(0.016)VGS(0.488)PS(0.488)RPS(0.002)S(0.002)S(0.002)R;DVDELPSLQPS(0.014)VGS(0.827)PS(0.158)RPSSSR;DVDELPSLQPS(0.368)VGS(0.473)PS(0.158)RPSSSR;DVDELPSLQPS(0.145)VGS(0.819)PS(0.035)RPSSSR;DVDELPSLQPS(0.012)VGS(0.957)PS(0.031)RPSSSR;DVDELPSLQPS(0.242)VGS(0.721)PS(0.038)RPSSSR 188.69 8.8583e-14 12341210000.0 8888620.0 8522290.0 7797160.0 6593740.0 6637630.0 7834780.0 6905420.0 7099780.0 9603940.0 7683250.0 True False 8395550.529575333 8112866.396181909 8299777.409497091 7220407.067119784 7159973.718051455 7785880.231855925 7603487.244004665 7075152.520281107 7860106.591625583 7615182.382478055 1.1024753062898198 1.0653541817788879 1.0898987040145272 0.9481594405057693 0.9402235374593261 1.022415464371626 0.9984642339623672 0.9290851045879722 1.0321626189427953 1.0 22.860447158780765 -5.252921131383146 24.882768980678982 0.9792383139446066 1.083853885525418 0.6711113146224689 0.0334587262535745 344.53517039193645 1006424.3233852591 0.009081714483970908 0.01540813427729296 5.585716230839186e-06 5.252921131383146 0.10461557158081147 DVDFELIK ddPTM_KYSE-520_SHP099_60min_R1 2 DVDFELIK 8 0 B7ZAR1;E9PCA1;P48643;E7ENZ3;P48643-2 B7ZAR1 CCT5 T-complex protein 1 subunit epsilon 0 ; 131.06 0.0059995 337910000.0 695290.0 881420.0 835380.0 509500.0 888280.0 956820.0 740010.0 771940.0 853430.0 898950.0 False True 656720.8776737481 839075.2601616062 889229.9314552592 557922.7268132386 958182.5823781602 950848.1314656431 814817.4326016218 769262.3203121497 698468.6252195475 890986.002372518 0.7370720481859776 0.9417378700982016 0.9980290701396176 0.6261857372928438 1.0754182218651147 1.067186385570283 0.9145120466897635 0.8633831712998382 0.7839277198066692 1.0 19.765043241238576 -4.256472740050154 23.76383148579745 0.9173704794593884 0.7370719042830688 0.15127959383185152 0.12917795423439637 537.6235927125593 2572184.2346885465 0.03264697394800826 0.2575920225542508 5.5402231791628855e-05 4.256472740050154 -0.18029857517631964 DVDIIDHHDNTYTVK ddPTM_KYSE-520_SHP099_60min_R1 4 DVDIIDHHDNTYTVK 15 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ;;; 157.75 6.7891e-07 7556090000.0 10522500.0 8825180.0 6387180.0 6270420.0 10020500.0 8875290.0 7361670.0 8137420.0 7403980.0 8258510.0 False True 9938795.9489163 8401205.105934761 6798907.842649329 6866358.831529491 10809056.341154106 8819896.022988344 8105859.446575549 8109193.189308107 6059603.871147044 8185346.026423552 1.2142181792721214 1.0263714055355 0.830619477869526 0.8388599344931579 1.3205374954535598 1.07752268438211 0.9902891607036027 0.9906964425365021 0.7402990480287227 1.0 22.96461197564527 -7.544201210461024 20.8044586864747 0.8685973869821961 1.0346483336694097 0.1657216891092551 0.15216450894941688 68.83867411122074 67156.15259610009 0.10703515470796117 0.04048156516920809 2.856266916295826e-08 7.544201210461024 0.16605094668721354 DVDLDLS(ph)DKDYSSDESIMESIK ddPTM_KYSE-520_SHP099_60min_R1 1 DVDLDLSDKDYSSDESIMESIK 22 1 F6VUX8;Q9HC77-2;Q9HC77 F6VUX8 CENPJ Centromere protein J 1 DVDLDLS(0.992)DKDYS(0.003)S(0.003)DES(0.001)IMESIK 79.017 0.0056633000000000005 69972000.0 69918.0 71932.0 61709.0 68203.0 67646.0 62076.0 61171.0 91390.0 95609.0 74452.0 True False 66039.50916192254 68476.27874786676 65686.86087789097 74684.9926140203 72969.35534690981 61688.56065807694 67354.76165142872 91072.9894205864 78248.8157067548 73792.41320277959 0.8949362989450925 0.9279582517473141 0.8901573756286466 1.0120958154436275 0.988846307904201 0.8359742957390269 0.9127599807088519 1.2341782233130152 1.0603910661076925 1.0 16.171184876087537 -7.237070567842929 24.796377629216916 1.11046348818558 0.9247391001481748 0.5515670303707731 0.07202281595089048 462.77219171702797 470892.76862635044 0.03349621324236287 0.01932775727011351 5.7933455359724897e-08 7.237070567842929 -0.1857243880374051 DVDLEFLAK ddPTM_KYSE-520_SHP099_60min_R1 4 DVDLEFLAK 9 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ;;; 138.1 0.0033841 449410000.0 554934.0 767529.0 765287.0 445321.0 818850.0 737617.0 614625.0 608282.0 828132.0 755829.0 False True 524150.7047864967 730655.7547554837 814618.624522493 487644.17394935974 883288.8363808225 733013.2586978667 676757.2931619457 606172.0117160858 677764.1043088649 749132.9430860641 0.6996764854943506 0.9753352345520098 1.0874153006363059 0.6509447734877369 1.179081556261698 0.9784822112857671 0.9033874419859766 0.809164804872886 0.9047314105782157 1.0 19.514862240265884 -4.256008319169802 23.82966263143171 0.9398157619737093 0.6996762831657307 0.22031149769419278 0.1372904498199715 481.6328598117459 2113110.8862113142 0.03349720307150308 0.2747752440439577 5.546150888733712e-05 4.256008319169802 -0.2401394788079786 DVDSEIS(ph)DLENEVENK ddPTM_KYSE-520_SHP099_60min_R1 2 DVDSEISDLENEVENK 16 0 C9JMN1;Q96SB8;Q96SB8-2 C9JMN1 SMC6 Structural maintenance of chromosomes protein 6 1 DVDSEIS(1)DLENEVENK;DVDSEIS(1)DLENEVENK 216.71 6.5738000000000004e-18 94918000.0 162574.0 146841.0 142632.0 124713.0 154015.0 148033.0 115581.0 161906.0 199400.0 148034.0 True False 153555.6961367657 139786.53794716555 151826.28693926887 136565.6860236693 166135.1042745219 147109.07113694667 127265.05544185606 161344.38587514457 163193.98646494476 146722.53392870934 1.0465720024394924 0.9527271251673318 1.0347850658920557 0.9307751329460059 1.132308036305077 1.0026344774581466 0.867385888412291 1.0996564846238261 1.11226259590254 1.0 17.1627309343413 DVDVSEDS(ph)PPPLPER ddPTM_KYSE-520_SHP099_60min_R1 4 DVDVSEDSPPPLPER 15 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 DVDVS(0.002)EDS(0.998)PPPLPER;DVDVS(0.082)EDS(0.918)PPPLPER;DVDVS(0.011)EDS(0.989)PPPLPER;DVDVS(0.001)EDS(0.999)PPPLPER 238.02 1.0782999999999999e-18 3865190000.0 5132160.0 4517170.0 3892730.0 3858360.0 4204540.0 4652060.0 3923050.0 4500900.0 5086840.0 4563280.0 True False 4847468.854092687 4300158.372789593 4143661.6043882207 4225057.374341768 4535413.377439854 4623024.767945967 4319630.179278373 4485287.42841796 4163198.084801101 4522852.889378119 1.0717723907131549 0.9507623789596337 0.9161610394447217 0.9341575942618604 1.0027771162071693 1.0221479409164733 0.9550675834323479 0.9916942996204052 0.9204805432823906 1.0 22.108801640859227 -4.256420655006854 24.49493716396909 0.9656797198091186 1.071772449533152 0.45165318895600315 0.034990530018564975 401.36517173782426 1958860.6570252387 0.00920576778988234 0.07466868114352455 5.540887659326909e-05 4.256420655006854 0.10609272972403339 DVEDMELS(ph)DVEDDGSK ddPTM_KYSE-520_SHP099_60min_R1 12 DVEDMELSDVEDDGSK 16 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK;DVEDMELS(1)DVEDDGSK 397.39 1.7369999999999995e-86 11536400000.0 14192000.0 12218740.0 10307360.0 12389870.0 12459710.0 12819890.0 12523670.0 12886460.0 13530810.0 12521180.0 True False 13404741.468949413 11631733.38969735 10971788.917959118 13567399.519649748 13440218.290947665 12739876.31121326 13789684.782840693 12841759.877982372 11073955.987962583 12410252.08653064 1.0801345029484237 0.9372680996804047 0.8840907373563551 1.093241251269586 1.0829931734855642 1.0265606389285495 1.1111526733455486 1.0347702680367037 0.8923232107413519 1.0 23.56502908510236 -3.9214720142432804 18.004463690202392 1.0128649693043357 2.8248555533724935 0.07128972108155396 0.07661573633375865 374.4476916364483 97826.30995270303 0.01963312982098769 3777.656025551779 0.00011981963319782215 3.9214720142432804 1.8119905840681578 DVEDMFSR ddPTM_KYSE-520_SHP099_60min_R1 1 DVEDMFSR 8 0 Q15717;Q15717-2;M0R055;M0QZR9 Q15717 ELAVL1 ELAV-like protein 1 0 204.03 9.3814e-06 211350000.0 177650.0 235300.0 256080.0 108450.0 208280.0 255370.0 174440.0 182710.0 224830.0 209810.0 False True 167795.40036350494 223995.83480749937 272587.3265424868 118757.05539331853 224670.4510489071 253776.14110530814 192074.09757033954 182076.22165483446 184006.5395030768 207951.24662971008 0.8068977853366326 1.077155527739438 1.310823238428916 0.5710812381172408 1.0803996354442067 1.220363643970822 0.9236496567503522 0.8755716765624869 0.8848542265809515 1.0 17.66588580814005 -6.969103738264559 24.991415794524293 0.9080494723314321 1.015984831614245 0.04644389796091919 0.19705223487919005 629.4575233404303 509155.4076195652 0.08360867614108501 0.05636838028100333 1.0737329032281924e-07 6.969103738264559 0.10793535928281295 DVEGSTS(ph)PQIGDKVEFSISDK ddPTM_KYSE-520_SHP099_60min_R1 1 DVEGSTSPQIGDKVEFSISDK 21 1 E9PLT0;O75534-2;O75534;O75534-3;O75534-4 E9PLT0 CSDE1 Cold shock domain-containing protein E1 1 DVEGS(0.003)T(0.143)S(0.854)PQIGDKVEFSISDK 174.53 1.4238e-09 181600000.0 224570.0 212680.0 192590.0 162590.0 184880.0 197250.0 150450.0 180420.0 244150.0 195210.0 True False 212112.654430804 202462.53356081145 205004.65955489498 178042.504715534 199429.0041766947 196018.88958382752 165658.9542505021 179794.16513034477 199818.51452064308 193480.59127108188 1.0962993912584085 1.0464229627929198 1.0595618827092943 0.9202086035910555 1.030744235721704 1.013119136633138 0.8562045069337243 0.9292620202841879 1.0327574110039868 1.0 17.561829326174212 -5.197827356158651 8.22575836592986 0.9657266434401512 1.0658432830744085 0.41294399898114165 0.053737886750860726 0.3611891276894761 43.272924497983944 0.01523832478346245 0.02645959783460836 6.341217417586776e-06 5.197827356158651 0.10011663963425721 DVEPEDPMFLMDPFAIHR ddPTM_KYSE-520_SHP099_60min_R1 1 DVEPEDPMFLMDPFAIHR 18 0 Q15773;F5H7L5;F5H800;F5H0Y3 Q15773 MLF2 Myeloid leukemia factor 2 0 111.06 0.00017201 13302000.0 27929.0 22225.0 22827.0 25784.0 32317.0 22990.0 25039.0 24680.0 20674.0 17068.0 False True 26379.7226949188 21157.27763959488 24298.464944491374 28234.50360775772 34860.164041422766 22846.510882292492 27570.186477090836 24594.390840355318 16920.122749128728 16916.79079870306 1.5593810320655632 1.250667333500212 1.4363519200316786 1.6690224489814194 2.060684231201544 1.350522753053377 1.6297527589691851 1.4538449480761368 1.000196961141467 1.0 14.046168287373375 -7.711951893003045 3.762654494851372 0.9827238650479895 1.5618293475318503 0.5391478097233213 0.20580036810712726 0.18128157284823213 4.977844528468305 0.18575851223646472 0.056947901271976145 1.9411008823105785e-08 7.711951893003045 0.5791054824838608 DVFFYQADDEHYIPR ddPTM_KYSE-520_SHP099_60min_R1 2 DVFFYQADDEHYIPR 15 0 K7EKE5;K7EIS0;Q9NRH3;P23258 K7EKE5 TUBG1;TUBG2 Tubulin gamma chain;Tubulin gamma-2 chain;Tubulin gamma-1 chain 0 ; 199.15 7.3654e-10 0.0 206785.0 184055.0 116444.0 137737.0 175224.0 189089.0 159645.0 118609.0 157262.0 167949.0 False True 195314.22383432233 175212.72152781283 123950.16655698742 150827.48306786103 189013.13191181948 187908.82541199704 175783.4745850539 118197.57306254865 128707.18505240782 166461.10252234477 1.1733325135708776 1.0525745586978392 0.7446194016427896 0.906082446784316 1.1354792744235698 1.1288452531231628 1.056003306006325 0.7100612171343903 0.7731967594959965 1.0 17.344825572128876 -7.250968135425848 24.43405466896109 0.8062217390067913 1.0214773617137187 0.30575289820657015 0.13696613096814134 626.9990818990457 1463071.7968893824 0.07040196700952028 0.04004988069512962 5.610891421339117e-08 7.250968135425848 0.21525562270692744 DVFLSAISSGADS(ph)PNSK ddPTM_KYSE-520_SHP099_60min_R1 3 DVFLSAISSGADSPNSK 17 0 Q8NHU6;Q8NHU6-2;Q8NHU6-3 Q8NHU6 TDRD7 Tudor domain-containing protein 7 1 DVFLSAISSGADS(0.999)PNS(0.001)K;DVFLSAISSGADS(1)PNSK;DVFLSAISSGADS(1)PNSK 316.68 2.2025e-47 760280000.0 729970.0 803040.0 614957.0 517645.0 577740.0 724011.0 587753.0 651863.0 857020.0 780930.0 True False 689477.1089408824 764460.7530123866 654598.1121859889 566841.8251643558 623204.8511090627 719492.1787907563 647168.8091564989 649601.8393989681 701406.7717160827 774011.5677543464 0.8907839852332887 0.9876606304868676 0.8457213554122791 0.7323428341115678 0.8051621927527234 0.9295625656839106 0.8361229161395369 0.8392663190857336 0.9061967558845234 1.0 19.561995602327325 -9.683464012557009 8.66855622902096 0.9999999822382022 0.8615982989936002 0.2721813384747864 0.06681577560109304 0.0 0.0 0.07008680851060158 0.016998547908920535 2.0726978048080344e-10 9.683464012557009 -0.138401683244602 DVFRDPALK ddPTM_KYSE-520_SHP099_60min_R1 5 DVFRDPALK 9 1 K7ELC7;P61353 K7ELC7 RPL27 60S ribosomal protein L27 0 ;;;; 138.22 0.00048969 2822610000.0 5451610.0 4869550.0 3350280.0 3094227.0 4976560.0 4949810.0 3486212.0 4014850.0 4030940.0 4082300.0 False True 5149198.325784899 4635609.50865643 3566244.409437527 3388301.4037667275 5368186.9592469325 4918916.399751211 3838632.3311103377 4000923.4224230335 3299022.907728205 4046133.9979813434 1.272621798574611 1.145688578521913 0.8813955274879086 0.8374170023674907 1.326744730136267 1.2157077353852608 0.948716066503351 0.9888262287949766 0.8153518665902119 1.0 21.948112668514 -6.872458717602031 8.595039072247031 0.9351894687284368 1.1011825950056324 0.2366421312348912 0.15320656030791233 0.46257010298182855 33.30505822998207 0.07028399230369665 0.04735034899618594 1.3413474327812337e-07 6.872458717602031 0.16599312627719565 DVFRDPALKR ddPTM_KYSE-520_SHP099_60min_R1 1 DVFRDPALKR 10 2 K7ELC7;P61353 K7ELC7 RPL27 60S ribosomal protein L27 0 131.42 0.00022529 3064500000.0 2155100.0 1666700.0 1293000.0 1017700.0 1991400.0 1593500.0 1248800.0 1423700.0 1423900.0 1288700.0 False True 2035552.306914659 1586629.2302322967 1376348.8488731477 1114421.9020173366 2148111.850483936 1583554.3754211871 1375040.8911135036 1418761.5169940786 1165355.6535979682 1277283.1205934298 1.5936578774868135 1.2421907129682759 1.077559725547529 0.8724940336638698 1.6817820699657537 1.2397833729184982 1.0765357100113053 1.1107651029905707 0.9123706677158157 1.0 20.2846469153545 -6.821938245304858 3.4331442533423377 1.02300952309341 1.2738450960231917 0.25167721680768007 0.22137883879742792 0.4105563120331499 9.758380607786991 0.1032492631928711 0.06875537840141295 1.5068213140742899e-07 6.821938245304858 0.25083557292978176 DVGRPQPGR ddPTM_KYSE-520_SHP099_60min_R1 9 DVGRPQPGR 9 1 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 ;;;;;;;; 140.45 0.00045463 16413560000.0 3753881.0 3563178.0 2634751.0 2442314.0 3736564.0 3708069.0 2774523.0 3298680.0 3014487.0 3177353.0 False True 3545645.7377537554 3391997.5804407867 2804591.265210653 2674430.788251521 4030610.3286590604 3684925.5659326394 3054998.8615750447 3287237.6489977017 2467132.149833257 3149204.1243632264 1.125886286736237 1.0770967668304618 0.8905714442304516 0.8492402151900188 1.2798822081671368 1.1701132795505076 0.9700860093318879 1.043831240905156 0.7834144921717688 1.0 21.586555842091965 -7.687740857625343 11.008691709939766 0.8919739666671954 1.0487342823379961 0.1929027918443592 0.13015055020901503 0.7490500287511893 107.31125853463404 0.09321487605594493 0.03513678635180642 2.052386467129231e-08 7.687740857625343 0.15676031567080073 DVIATDKEDVAFK ddPTM_KYSE-520_SHP099_60min_R1 2 DVIATDKEDVAFK 13 1 A0A5K1VW95;P40925;P40925-3;C9JLV6;C9JRL4;C9JF79 A0A5K1VW95 MDH1 Malate dehydrogenase, cytoplasmic;Malate dehydrogenase 0 ; 157.38 2.1205000000000003e-06 1315870000.0 2284380.0 1861180.0 1271730.0 1164080.0 1934960.0 1905930.0 1410770.0 1730440.0 1413800.0 1706690.0 False True 2157660.887601368 1771766.119111867 1353707.7506399436 1274713.8132065851 2087230.3435836066 1894034.3839011632 1553384.3993883727 1724437.507527731 1157089.5589976877 1691570.0543847287 1.2755374109446327 1.0474092483011634 0.8002670342448956 0.7535684436493729 1.2339012139481216 1.1196901830885606 0.9183092331067435 1.0194301460100965 0.6840328935821423 1.0 20.689931495211987 -7.712669809934236 24.991559664260176 0.8420154855075812 1.0125829909997852 0.1438066192717985 0.1737326335757889 205.91707058874997 105520.34473079017 0.12199083950562196 0.04610797368019201 1.937894767410617e-08 7.712669809934236 0.170567505492204 DVIEEYFK ddPTM_KYSE-520_SHP099_60min_R1 11 DVIEEYFK 8 0 P25398 P25398 RPS12 40S ribosomal protein S12 0 ;;;;;;;;;; 143.89 0.0041335 3464651000.0 5055597.0 6037636.0 3988338.0 3251808.0 5446632.0 6259888.0 4626917.0 4968371.0 4763675.0 5331959.0 False True 4775152.956327244 5747578.903883608 4245432.649046429 3560858.8546282775 5875250.951303111 6220817.717004442 5094650.92471831 4951136.88062751 3898711.7024743995 5284721.991461334 0.903576945777391 1.0875839662275752 0.8033407728743136 0.673802493372717 1.1117426727074595 1.1771324446310671 0.9640338570221619 0.9368774532751569 0.7377326014071605 1.0 22.333396148389173 -1.0118823866965876 17.948231800157004 0.9428328689444164 0.8463383858078525 0.0 0.15606897769163328 0.0 0.0 0.03773087566337409 0.0 0.09730106936395186 1.0118823866965876 -0.09649448313656395 DVKPHNVMIDHEHR ddPTM_KYSE-520_SHP099_60min_R1 19 DVKPHNVMIDHEHR 14 1 P68400;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8Y5A0;A0A2R8YDP2;Q8NEV1;P68400-2;A0A2R8Y4H0;A0A2R8Y4D6;V9GYW6 P68400 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 0 ;;;;;;;;;;;;;;;;;; 233.4 1.0475999999999999e-17 64290250000.0 23396640.0 20130460.0 19441600.0 21195300.0 21901770.0 20597450.0 20786170.0 21939050.0 22354690.0 13314137.0 False True 22098781.739154473 19163362.48516352 20694836.643659864 23209694.939400665 23625314.694975134 20468893.67431387 22887438.917069808 21862948.556162775 18295641.811875794 13196184.104421828 1.6746342400413714 1.4521896885890058 1.5682440075025446 1.7588186672557464 1.790314117174121 1.5511221662522179 1.7343982727098053 1.6567629235209635 1.3864342651710369 1.0 23.65361747489325 -8.05303656980799 2.6703519023768454 1.0011026860736518 1.6475023621698381 0.8080411760799776 0.0980585710372947 0.13735161973105897 2.311521922228074 0.10104816198741491 0.027287263448789918 8.85041081724929e-09 8.05303656980799 0.6463996760961863 DVKPHNVMIDHEHRK ddPTM_KYSE-520_SHP099_60min_R1 13 DVKPHNVMIDHEHRK 15 2 P68400;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8Y5A0;A0A2R8YDP2;Q8NEV1;P68400-2;A0A2R8Y4H0;A0A2R8Y4D6;V9GYW6 P68400 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 0 ;;;;;;;;;;;; 230.38 2.0666e-15 26710319000.0 27729204.0 23144554.0 13612447.0 12189900.0 8346372.0 18993112.0 9812045.0 18018121.0 19863496.0 11237516.0 False True 26191009.777322266 22032654.88515617 14489927.114305263 13348424.430972937 9003183.992039422 18874568.942870814 10803942.264930973 17955620.343712054 16256785.844385568 11137960.35089515 2.3515086202670235 1.978158854137546 1.30094978414434 1.1984621968868954 0.8083332772248415 1.6946162805610885 0.9700108390188934 1.6121102767499953 1.4595837417466675 1.0 23.408981726237357 -4.641986706481793 2.7762299190738626 1.2584385547676205 2.3154717974250443 0.658931407258642 0.2680346719309054 0.16153679504415608 2.3706702780743245 0.07056937460550974 0.2631398081318951 2.28041187310097e-05 4.641986706481793 1.0570332426574238 DVLDVYIEHR ddPTM_KYSE-520_SHP099_60min_R1 1 DVLDVYIEHR 10 0 P33993;P33993-2 P33993 MCM7 DNA replication licensing factor MCM7 0 127.42 0.00015725 0.0 144620.0 113030.0 74851.0 75333.0 137430.0 101970.0 89015.0 94018.0 75589.0 95667.0 False True 136597.64030717738 107599.86913851109 79676.01522583446 82492.62567030771 148244.95913026377 101333.56740614906 98013.50490268154 93691.87350196614 61863.943043624466 94819.46480779983 1.440607586048523 1.1347867165947128 0.8402917627444817 0.8699967442077555 1.5634443774889264 1.0687000565923188 1.0336854895917844 0.9881080186634745 0.652439276777436 1.0 16.532895629592115 -7.268600429073371 2.014957007949052 0.8350707517229016 1.1389254005588512 0.23267247551149994 0.22570875238322938 0.5584622826607312 4.235724246279253 0.16982417821493623 0.06888079652908674 5.387652433969713e-08 7.268600429073371 0.3038546488359496 DVLLQVDDERR ddPTM_KYSE-520_SHP099_60min_R1 2 DVLLQVDDERR 11 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 211.26 3.2651e-09 862980000.0 444870.0 427290.0 311300.0 247170.0 465520.0 388560.0 306590.0 374170.0 351840.0 321200.0 False True 420192.17427364184 406762.3470246343 331366.8960976107 270660.96248562995 502153.77555352094 386134.8529109859 337583.1092300521 372872.09160193446 287954.72516462463 318354.41788981867 1.3198879948293 1.2777028499268803 1.0408741876241077 0.8501875497116699 1.577341941355796 1.2129087306858917 1.060400265426467 1.171248365496169 0.9045099077729298 1.0 18.280274259464303 -7.515982928046013 1.6105437771753963 0.9599399450927284 1.198480952744003 0.19459921824938964 0.18480929739531637 0.7169919276312399 3.307490311738476 0.1713294141918492 0.05628611600059691 3.048014803597334e-08 7.515982928046013 0.23854100765127462 DVLSLLNLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 DVLSLLNLSPR 11 0 Q96AY4;A0A087WW06 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 DVLSLLNLS(1)PR 129.37 0.00015667 61232000.0 49318.0 55578.0 51308.0 46852.0 46404.0 47653.0 43274.0 44325.0 67281.0 43867.0 True False 46582.2322270044 52907.94945572124 54615.3957757026 51304.79999343255 50055.7307973569 47355.57995101715 47648.55823354083 44171.24692053276 55064.46641598772 43478.372508009554 1.071388590233525 1.2168797129187523 1.2561508774423742 1.1800073699626457 1.1512788522186672 1.0891755422145422 1.09591402541029 1.0159360705692368 1.2664794756483533 1.0 15.408010317647696 -6.049490266314305 2.6750534558564065 1.0944659993526635 1.1887778215313045 0.21081068444263884 0.0799674774647222 0.4294288756192761 6.104207247699727 0.027391001303558947 0.02890519146317192 8.922976181086295e-07 6.049490266314305 0.09431182217864098 DVNFEFPEFQL ddPTM_KYSE-520_SHP099_60min_R1 3 DVNFEFPEFQL 11 0 P62081 P62081 RPS7 40S ribosomal protein S7 0 ;; 113.69 0.0021100000000000003 165107000.0 364606.0 407265.0 1751970.0 262482.0 596486.0 389832.0 364912.0 284708.0 1006750.0 507057.0 False True 344380.57835595845 387699.3780827717 1864904.789451113 287428.2103619088 643426.0546589126 387398.91388716217 401800.86615792086 283720.414399347 823949.5781022218 502564.869464376 0.6852460235093485 0.7714414628622456 3.7107742756446402 0.5719226070621376 1.2802845836491987 0.7708436013445279 0.7995005034596877 0.5645448610479494 1.6394890056290077 1.0 18.938950301204706 DVNSSS(ph)PVMLAFK ddPTM_KYSE-520_SHP099_60min_R1 6 DVNSSSPVMLAFK 13 0 Q9NRI2;C4P0D4;Q5VVQ1;C4P0D6;C4P0D8;Q99598 Q9NRI2 TRAX;DISC1;TSNAX Translin-associated protein X 1 DVNS(0.002)S(0.008)S(0.989)PVMLAFK;DVNS(0.001)S(0.01)S(0.99)PVMLAFK;DVNS(0.008)S(0.054)S(0.938)PVMLAFK;DVNSS(0.02)S(0.98)PVMLAFK;DVNSS(0.001)S(0.999)PVMLAFK;DVNSS(0.148)S(0.852)PVMLAFK 220.34 2.0788e-11 3638308000.0 6080090.0 6244950.0 5325130.0 4544030.0 5030990.0 6396250.0 5176470.0 5725670.0 6838960.0 5969110.0 True False 5742815.28734107 5944933.228138941 5668396.400309251 4975893.24498757 5426900.290582595 6356328.631181533 5699758.105078737 5705808.987151428 5597177.260151952 5916228.329297309 0.970688581930232 1.0048518916518967 0.9581098099678155 0.8410583513734289 0.9172905419671602 1.0743886607122375 0.9634107725108232 0.964433532576172 0.9460718803624586 1.0 22.49624630181326 DVPGGGPSSSAPAGAEADGPKAS(ph)PEARPQIPTKPR ddPTM_KYSE-520_SHP099_60min_R1 3 DVPGGGPSSSAPAGAEADGPKASPEARPQIPTKPR 35 3 Q8N3F8;B0QY86 Q8N3F8 MICALL1 MICAL-like protein 1 1 DVPGGGPSSSAPAGAEADGPKAS(0.968)PEARPQIPT(0.032)KPR;DVPGGGPSSSAPAGAEADGPKAS(0.965)PEARPQIPT(0.035)KPR;DVPGGGPSSSAPAGAEADGPKAS(0.992)PEARPQIPT(0.007)KPR 142.18 8.221200000000001e-07 13077100000.0 5963870.0 5214040.0 4782660.0 4571930.0 4772190.0 4984140.0 4606820.0 5159410.0 6489620.0 4778050.0 True False 5633042.242419907 4963549.691966398 5090957.916126566 5006444.852599124 5147734.202953167 4953032.133487143 5072522.323830495 5141513.210925352 5311268.598007192 4735720.194266646 1.1894795324351328 1.0481087328545247 1.075012396697337 1.0571665231954022 1.0870013412501294 1.045887833382468 1.0711195163032652 1.0856877095800515 1.1215334479510297 1.0 22.17515241248085 -7.461121986696267 0.008209305079539306 1.6252611004754204e-07 2.1326334123239286 0.25482611645125564 0.041364928145384845 2507.9676964755313 20.93392135256889 2719.3646798891027 2715.9588755071395 3.458422223764113e-08 7.461121986696267 2.1326332497978187 DVPNETLQVEEDDRPELPWWK ddPTM_KYSE-520_SHP099_60min_R1 2 DVPNETLQVEEDDRPELPWWK 21 1 O95373 O95373 IPO7 Importin-7 0 ; 252.75 4.7728999999999995e-27 300350000.0 488570.0 458110.0 282783.0 225604.0 392420.0 373563.0 292470.0 290702.0 330313.0 365058.0 False True 461468.04815985094 436101.7079628706 301011.6446487977 247045.3363296838 423301.22143562586 371231.4547508411 322035.72183213255 289693.62261235673 270336.48571311566 361823.8701308265 1.2753941523896575 1.2052872791537692 0.8319286523024569 0.6827778837265722 1.1699096062472902 1.0260004532498452 0.8900344847776143 0.8006481786500452 0.7471493951335182 1.0 18.464928062560144 -4.704739036268476 5.898628002170916 0.8934849534259749 1.2512429526319522 0.5103719411198471 0.13611954028555934 0.16416037499928646 11.601077789916033 0.03737236301599878 0.1002076287825625 1.9736083037386593e-05 4.704739036268476 0.3577579992059773 DVPPDILLDS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 4 DVPPDILLDSPER 13 0 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER;DVPPDILLDS(1)PER 169.37 6.9137e-07 521274000.0 750637.0 812400.0 688142.0 769986.0 644981.0 686864.0 570024.0 649199.0 813860.0 679884.0 True False 708997.6692522381 773371.0845627384 732500.7343861297 843165.2379352686 695737.3352601082 682577.0269967362 627647.5888181325 646947.0801931857 666083.5397410229 673860.7567017473 1.052142690015769 1.147671943901364 1.0870209121115753 1.25124549775267 1.0324645386169053 1.0129348240097127 0.9314203009686928 0.960060478012858 0.9884587180906772 1.0 19.362090985177108 -5.988947410872616 24.6621394719395 0.9786390498146539 1.1332904163314477 0.6664642895572046 0.05210541224649232 111.12955137220398 247966.39706203673 0.016181249708115204 0.0183311770082311 1.0257761309279358e-06 5.988947410872616 0.1546513665167938 DVPPDILLDS(ph)PERK ddPTM_KYSE-520_SHP099_60min_R1 11 DVPPDILLDSPERK 14 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK;DVPPDILLDS(1)PERK 235.24 1.7011000000000001e-18 8213450000.0 6987762.0 6385053.0 5732708.0 5438531.0 5803066.0 6244107.0 5733731.0 5614057.0 7169052.0 5968541.0 True False 6600136.912101797 6078305.469720058 6102247.530337109 5955407.351086038 6259734.279271073 6205135.212079116 6313352.485301992 5594583.146597751 5867332.873894104 5915664.370194634 1.1157051007416505 1.0274932939645582 1.031540525030891 1.0067182616193786 1.0581625135479276 1.0489329386810629 1.0672262809754829 0.9457235563912969 0.9918299123689229 1.0 22.49610877166116 -7.255852556415224 24.9864466207206 0.976582549836863 1.047699396161899 0.5374675936311035 0.03032995413775934 350.32215445344235 1566787.6180258726 0.014672849799546113 0.008161492401962903 5.5481404113116746e-08 7.255852556415224 0.07111684632503601 DVPPLSETEAT(ph)PVPIKDMEIAQTQK ddPTM_KYSE-520_SHP099_60min_R1 1 DVPPLSETEATPVPIKDMEIAQTQK 25 1 E7EVA0;P27816-6;P27816 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DVPPLS(0.006)ET(0.031)EAT(0.963)PVPIKDMEIAQTQK 168.72 7.4407e-10 309060000.0 175850.0 199860.0 165000.0 154580.0 148680.0 189000.0 147740.0 214060.0 225620.0 206920.0 True False 166095.24995171608 190258.42560402406 175636.16400933414 169271.23672382836 160380.27012651993 187820.38089400984 162675.0010034508 213317.47582197975 184653.0954173563 205086.84978132384 0.8098776207680649 0.9276968552927174 0.8563989558404558 0.8253636783846245 0.7820114761015989 0.9158089906509141 0.7932005449247714 1.0401323929322233 0.9003653604033839 1.0 17.64587546326338 -7.259294856680329 24.999152127262025 0.9776866582380778 0.8476290119927578 0.5573058805108781 0.05540871731636125 141.8554479777008 1653662.692696845 0.026413541718071476 0.014290805451894591 5.504338620243366e-08 7.259294856680329 -0.13005764624532 DVPSPGGLSAPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 DVPSPGGLSAPSSPR 15 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 DVPSPGGLSAPS(0.003)S(0.997)PR;DVPSPGGLSAPS(0.001)S(0.999)PR 253.82 1.7261e-19 2287800000.0 1561910.0 1625360.0 1238610.0 1042110.0 1250490.0 1740020.0 1636930.0 2030750.0 2478600.0 1943250.0 True False 1475267.7387096074 1547275.2658849007 1318452.7824460708 1141151.821078205 1348896.4486851725 1729159.8897523533 1802406.8592972702 2023705.8022306107 2028548.7204213256 1926034.3168256243 0.7659612945739493 0.80334771419599 0.6845427264344213 0.5924877927195938 0.7003491250915735 0.8977824925789756 0.9358124325987558 1.0507111864787346 1.053225637103216 1.0 20.877201977735602 -6.562360020658933 1.8709627360143752 1.0275379331252463 0.7062969841290061 0.8538078163923504 0.05911379934579018 0.13853626468346816 0.9815821966098945 0.03142516020548843 0.02312971978184257 2.73930240845031e-07 6.562360020658933 -0.3212409489962402 DVPYPPPLS(ph)PAIEAIQK ddPTM_KYSE-520_SHP099_60min_R1 2 DVPYPPPLSPAIEAIQK 17 0 G3V2R9;G3V3Y1;Q8N8N7 G3V2R9 PTGR2 Prostaglandin reductase 2 1 DVPYPPPLS(1)PAIEAIQK;DVPYPPPLS(1)PAIEAIQK 91.355 0.0016120999999999998 367450000.0 118737.0 178069.0 128877.0 102385.0 104251.0 141568.0 112072.0 156801.0 168726.0 153102.0 True False 112150.42191365865 169514.29795298175 137184.61763049065 112115.63961682729 112454.96059295013 140684.42160001665 123401.33147731643 156257.09392862863 138089.61163633023 151745.63539155343 0.7390685183417226 1.1170950486686444 0.9040432515670677 0.7388393038622312 0.7410754207379969 0.9271068735321762 0.8132117352759477 1.0297304006499703 0.9100071397771264 1.0 17.211295495764446 -7.259900827744654 24.983424820066606 0.9774015785418002 0.8603646286135169 0.2067358999629758 0.1122489780905215 249.91044949980113 4058197.035485296 0.058363736477263665 0.031359297256784095 5.496663772501998e-08 7.259900827744654 -0.11703694992828328 DVQEIFR ddPTM_KYSE-520_SHP099_60min_R1 4 DVQEIFR 7 0 Q13838-2;Q13838;Q5STU3;A0A0G2JJZ9;F6WLT2;F6TRA5;A0A140T9X9;F6S4E6;A0A0A0MT12;F6UJC5;A0A140T996;A0A140TA18;A0A140T9X3;A0A140T9L4;A0A140T973;A0A140T9K1;O00148;K7EQN7;O00148-3;O00148-2 Q13838-2;O00148 DDX39B;DDX39A Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A 0 ;;; 139.68 0.012713 1394750000.0 1001050.0 1217690.0 846910.0 698628.0 1091910.0 1285600.0 906880.0 964790.0 1002890.0 1075750.0 False True 945519.760956299 1159190.3446100457 901503.1737039106 765025.3950698319 1177837.104881948 1277576.0935308929 998556.2806958806 961443.3686736777 820790.4567995399 1066219.6919208358 0.8867963780080903 1.0871965256257083 0.8455135283421917 0.7175119732516 1.104685191810732 1.1982296924466762 0.9365389593367415 0.9017310184372983 0.7698136350500658 1.0 20.02407330178266 -10.554178745979137 2.690617446074468 1.0034403835836412 0.9451605198939377 0.014277997098387951 0.14406009056467867 63396728.992665924 63835232.234095514 1586556.841042804 0.03930047512424719 2.7913947286022426e-11 10.554178745979137 -0.058279863689703504 DVQIGDIVTVGECRPLSK ddPTM_KYSE-520_SHP099_60min_R1 1 DVQIGDIVTVGECRPLSK 18 1 P62280;M0R1H5 P62280 RPS11 40S ribosomal protein S11 0 163.85 2.7910000000000003e-08 297040000.0 398500.0 316310.0 176290.0 228330.0 220160.0 322430.0 216360.0 315910.0 253210.0 265080.0 False True 376394.4106099448 301113.99280901026 187653.93547397316 250030.41455008203 237485.33946095378 320417.59477066394 238231.78027011396 314814.18194394803 207233.44690465706 262731.5974291196 1.4326195032993299 1.1460897575909026 0.714241976641576 0.9516571931076386 0.9039085583340359 1.219562465672242 0.9067496357547354 1.1982349478496945 0.7887648418860813 1.0 18.00323019113606 -4.414087090119292 3.813051241561407 0.9703044082581898 1.422270436111399 0.4798268440137671 0.15054468596268686 0.20270351207790485 4.818969917561384 0.037364684083025713 0.18688607906764043 3.854010645116913e-05 4.414087090119292 0.45196602785320916 DVQNFPAATDEKDKFVEK ddPTM_KYSE-520_SHP099_60min_R1 1 DVQNFPAATDEKDKFVEK 18 2 A0A2R8Y5N1;A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610;H9KV28 A0A2R8Y5N1 DIAPH1 Protein diaphanous homolog 1 0 195.39 8.0923e-13 3141000000.0 520670.0 443670.0 335780.0 282460.0 409030.0 406470.0 343830.0 331040.0 415710.0 340960.0 False True 491787.3971700873 422355.4272377526 357424.9160669954 309304.91347530426 441218.3339376542 403933.06995760894 378587.69185742846 329891.6995053165 340227.5431963 337939.3596628662 1.4552533852839824 1.2497964950253242 1.0576599198849412 0.9152675017904747 1.30561392546231 1.1952826991226446 1.1202829177255755 0.9761860821255678 1.0067709885457452 1.0 18.36640486484233 -4.461544904396365 2.6638937938481777 1.0805785288184482 1.4633077171027633 0.5525686442111852 0.10835254064597342 0.271289346697925 3.2517368199287393 0.030733165585549775 0.18598963140354222 3.4550560376659944e-05 4.461544904396365 0.3827291882843151 DVQS(ph)PGFLNEPLSSK ddPTM_KYSE-520_SHP099_60min_R1 4 DVQSPGFLNEPLSSK 15 0 E9PPJ1;Q8NG31-3;Q8NG31-4;Q8NG31-2;Q8NG31;H0YCZ2 E9PPJ1 CASC5 Protein CASC5 1 DVQS(1)PGFLNEPLSSK;DVQS(1)PGFLNEPLSSK;DVQS(1)PGFLNEPLSSK;DVQS(1)PGFLNEPLSSK 195.96 3.1357e-11 1179070000.0 2470690.0 2435140.0 2015420.0 1838843.0 2049870.0 2601210.0 2383630.0 2812500.0 3121340.0 2912460.0 True False 2333635.900501594 2318152.219180341 2145337.197986018 2013606.0858516907 2211183.10683514 2584974.8835201412 2624590.5823869985 2802744.093942433 2554583.3385781893 2886657.870259592 0.8084213666414629 0.8030574884067829 0.7431906704597077 0.6975561969422482 0.7660011010020708 0.8954905637250594 0.9092142887549656 0.9709304738944998 0.8849622828175547 1.0 21.46096869728982 -6.364568794375277 2.8103701574404893 0.9370597098440404 0.759758481859593 0.8095702932866051 0.041286714489736184 0.12503761346056194 1.9169095939875658 0.016723024998162236 0.014528988006889842 4.3194773955883206e-07 6.364568794375277 -0.17730122798444736 DVRNS(ph)DMHLLDLESMGK ddPTM_KYSE-520_SHP099_60min_R1 3 DVRNSDMHLLDLESMGK 17 1 Q9Y3P9;Q9Y3P9-2;Q9Y3P9-3 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 DVRNS(1)DMHLLDLESMGK;DVRNS(1)DMHLLDLESMGK;DVRNS(1)DMHLLDLESMGK 174.55 1.1874e-08 448489000.0 596216.0 621857.0 671883.0 599136.0 607725.0 616114.0 562300.0 596179.0 722924.0 680969.0 True False 563142.7099528702 591982.0562936128 715193.6532308103 656077.7053031933 655549.5000177509 612268.6039901162 619142.771519157 594110.9941982253 591659.2250310113 674936.1444458656 0.8343644277863058 0.8770934275266001 1.0596463963535347 0.9720589283921733 0.9712763280087311 0.9071504156779148 0.9173353310741478 0.8802477080050304 0.8766151137405359 1.0 19.364391490009073 -8.888400507826752 12.798091607700435 0.9999999999999518 0.9256521401391872 0.12458045105969495 0.06144809821866495 0.0 0.0 0.06438795163642953 0.015616372094950617 1.2930028798686261e-09 8.888400507826752 -0.07434785986076464 DVRQS(ph)LS(ph)PMSQRPVLK ddPTM_KYSE-520_SHP099_60min_R1 3 DVRQSLSPMSQRPVLK 16 2 Q9NSV4-7;Q9NSV4-6;Q9NSV4-5;Q9NSV4-4;Q9NSV4;Q9NSV4-1 Q9NSV4-7 DIAPH3 Protein diaphanous homolog 3 2 DVRQS(0.997)LS(0.926)PMS(0.077)QRPVLK;DVRQS(0.997)LS(0.912)PMS(0.091)QRPVLK;DVRQS(0.999)LS(0.771)PMS(0.23)QRPVLK 96.848 0.0011159 2770220000.0 2886280.0 3381480.0 3043560.0 2818600.0 2889820.0 2956200.0 2630220.0 2550040.0 3948940.0 3136930.0 True False 2726172.294743468 3219028.6250950405 3239752.7474681796 3086478.89655701 3117232.3931733863 2937749.2592532877 2896108.306073484 2541194.506423808 3231912.040676419 3109139.24069461 0.8768254116963949 1.0353439894109986 1.0420095391882125 0.9927116985173885 1.0026030202741798 0.9448754242981308 0.9314823434625163 0.8173305566900511 1.0394877136330443 1.0 21.568083797570008 -6.352384766207311 4.072345374622492 0.9326507215099363 0.9955208088619534 0.07186120299206444 0.06869033384091565 0.4528485951294898 13.626968181845402 0.02450954690047498 0.021536074933262973 4.442375177633545e-07 6.352384766207311 0.06287008735201705 DVRQS(ph)LSPMS(ph)QRPVLK ddPTM_KYSE-520_SHP099_60min_R1 1 DVRQSLSPMSQRPVLK 16 2 Q9NSV4-7;Q9NSV4-6;Q9NSV4-5;Q9NSV4-4;Q9NSV4;Q9NSV4-1 Q9NSV4-7 DIAPH3 Protein diaphanous homolog 3 2 DVRQS(0.918)LS(0.508)PMS(0.574)QRPVLK 59.339 0.029776999999999998 1065400000.0 862140.0 913350.0 912400.0 810720.0 814050.0 903950.0 781050.0 710060.0 1044000.0 856500.0 True False 814315.3755665192 869471.2950337006 971214.7638916168 887770.5850481446 878111.1036890873 898308.1127467736 860006.1563134235 707596.9675892496 854435.9170983054 848912.0763469161 0.9592458374143111 1.024218313367924 1.144069911304596 1.0457744798123811 1.0343958204338688 1.0581874587206028 1.0130685853996189 0.8335338691778525 1.0065069645082207 1.0 19.69525561291835 -7.015347199764562 23.335787378960266 0.9366724705371262 1.046557939103025 0.33352623757344824 0.06118792936173949 292.7071475062823 445066.1504188414 0.027444205581206277 0.01654958326195239 9.652788714846728e-08 7.015347199764562 0.10988546856589887 DVS(ph)GLR ddPTM_KYSE-520_SHP099_60min_R1 1 DVSGLR 6 0 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 DVS(1)GLR 60.708999999999996 0.056531 349080000.0 723520.0 756770.0 749510.0 629900.0 688900.0 633890.0 674450.0 741120.0 819340.0 718950.0 True False 683384.9032986381 720413.6332650718 797824.6138584008 689765.5066136597 743112.5106951805 629933.657380444 742629.9879976808 738549.2276987085 670568.5098805807 712580.6623346359 0.9590281345267728 1.0109923989584177 1.1196270906994295 0.9679823535398412 1.0428468662909163 0.8840173340048064 1.0421697181124647 1.0364429835620175 0.9410422501272905 1.0 19.442693807287107 DVS(ph)LGDWEFGKR ddPTM_KYSE-520_SHP099_60min_R1 1 DVSLGDWEFGKR 12 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 DVS(1)LGDWEFGKR 107.53 0.00047725 215080000.0 289260.0 279950.0 275570.0 228400.0 278700.0 256550.0 250680.0 311820.0 371660.0 319890.0 True False 273214.17117448576 266500.78178648336 293333.6831275898 250107.06732903625 300632.10441391624 254948.77628760936 276021.1808010359 310738.3691993354 304175.9127861653 317056.02347065386 0.8617220647119292 0.8405479223174267 0.925179341860825 0.788841872774531 0.9481986846458453 0.8041127037954129 0.8705754200143241 0.9800740127812042 0.9593759155133014 1.0 18.274378260044514 -7.2460483281792625 6.033772853598097 0.9778153042189993 0.8621539714092771 0.5729928167491256 0.04632866099394998 0.11148473731773974 17.006384936413887 0.02167066849248561 0.011653483652697272 5.674814527033746e-08 7.2460483281792625 -0.11566133280972224 DVSGFSDPYCLLGIEQGVGVPGGS(ph)PGSR ddPTM_KYSE-520_SHP099_60min_R1 3 DVSGFSDPYCLLGIEQGVGVPGGSPGSR 28 0 K7EIH3;K7EQ37;K7EN81;Q70J99-2;Q70J99;Q70J99-3 K7EIH3 UNC13D Protein unc-13 homolog D 1 DVSGFSDPYCLLGIEQGVGVPGGS(0.808)PGS(0.192)R;DVSGFSDPYCLLGIEQGVGVPGGS(0.779)PGS(0.221)R;DVSGFSDPYCLLGIEQGVGVPGGS(0.968)PGS(0.032)R 140.57 1.3841999999999998e-06 440796000.0 286228.0 369807.0 249676.0 197498.0 214101.0 325889.0 208338.0 296242.0 357169.0 318749.0 True False 270350.36225862824 352040.9166283762 265770.51445572433 216268.15054006127 230949.53063194753 323855.00586861325 229398.83822293824 295214.40564540226 292316.1130977826 315925.1318429695 0.8557418673263569 1.1143175428137766 0.8412452434706128 0.6845550693559804 0.731026143076015 1.0251004849768814 0.7261177256925571 0.9344441954435537 0.9252702100416571 1.0 18.269223182471382 -9.059611705709436 10.883614206905536 0.9999799984392519 0.8697135838647462 0.08266865525656497 0.12899460625854567 0.0 0.0 0.12936033960093316 0.03137449082002463 8.717426498637837e-10 9.059611705709436 -0.13026641457450572 DVSHSS(ph)PVDLK ddPTM_KYSE-520_SHP099_60min_R1 1 DVSHSSPVDLK 11 0 Q96JN0-2;Q96JN0 Q96JN0-2 LCOR Ligand-dependent corepressor 1 DVSHS(0.24)S(0.76)PVDLK 112.15 0.0033529000000000002 0.0 196100.0 189530.0 194680.0 207640.0 214460.0 209630.0 202650.0 234820.0 236980.0 252560.0 True False 185221.94208434163 180424.6943096699 207229.38429901312 227374.04317075788 231336.7818895175 208321.62141169983 223135.8396734081 234005.46422740023 193950.40577965204 250322.5148887064 0.7399332104293194 0.7207689423777436 0.8278495619586894 0.908324380137554 0.9241549126828245 0.8322128814674133 0.891393408110391 0.9348158887403286 0.7748020822892521 1.0 17.93342853237261 -4.931234078385872 3.1755700234826847 0.8903165360945912 0.7294797725093963 0.5661566434464573 0.057152707748523955 0.1694803906361519 3.4395676596774147 0.014809955706104978 0.03484078572335969 1.1715637395918002e-05 4.931234078385872 -0.16083676358519483 DVSHSS(ph)PVDLKIPQVR ddPTM_KYSE-520_SHP099_60min_R1 2 DVSHSSPVDLKIPQVR 16 1 Q96JN0-2;Q96JN0 Q96JN0-2 LCOR Ligand-dependent corepressor 1 DVSHS(0.001)S(0.999)PVDLKIPQVR;DVSHS(0.002)S(0.998)PVDLKIPQVR 228.39 1.0419e-18 1143700000.0 914700.0 1039360.0 1049030.0 886440.0 941310.0 784290.0 752090.0 805220.0 1245320.0 893400.0 True False 863959.7675907555 989427.585488835 1116652.152307345 970686.9910820951 1015385.7416787352 779394.955192396 828118.5968910594 802426.8797597603 1019201.2799625135 885485.1710546829 0.9756908368795278 1.117384703699045 1.2610625099202102 1.0962204933662865 1.1466998825845163 0.8801897317648751 0.9352145286687349 0.9062002459103933 1.1510088630265418 1.0 19.756108621250245 -6.246238762403696 24.77352230152452 0.9662034291750744 1.1258801758596448 0.36723974682411953 0.09458897757916529 748.5273298178054 1219928.5485828288 0.03168372127009921 0.031567212416637874 5.672326717381731e-07 6.246238762403696 0.15967674668457044 DVT(ph)PPPETEVVLIK ddPTM_KYSE-520_SHP099_60min_R1 11 DVTPPPETEVVLIK 14 0 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 DVT(1)PPPETEVVLIK;DVT(0.981)PPPET(0.019)EVVLIK;DVT(1)PPPETEVVLIK;DVT(0.998)PPPET(0.002)EVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(1)PPPETEVVLIK;DVT(0.889)PPPET(0.111)EVVLIK 157.86 1.3552000000000002e-06 33765327000.0 21576424.0 26937223.0 19513311.0 19767587.0 19194898.0 24449717.0 19374987.0 26027010.0 27295066.0 28574694.0 True False 20379536.749185126 25643118.373483963 20771170.249461513 21646292.52513827 20705427.268570058 24297117.247041002 21333599.767610982 25936728.37705981 22338970.067019902 28321544.44193556 0.7195771682214214 0.9054279658391204 0.733405280635252 0.7643048058172534 0.7310839742874912 0.8579022693078979 0.7532639970023115 0.9157949853418104 0.7887624247617904 1.0 24.755396605408112 -8.842251849704134 0.4418700458318159 1.0232043995989175 0.7769990462341444 0.48081753203915734 0.06613283202631683 2.905155259073776 0.8301662199268733 0.19365070318182406 0.03871247374811325 1.4379644531078202e-09 8.842251849704134 -0.24620535336477312 DVTGS(ph)PPAK ddPTM_KYSE-520_SHP099_60min_R1 2 DVTGSPPAK 9 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 DVT(0.074)GS(0.926)PPAK;DVT(0.011)GS(0.989)PPAK 75.416 0.016756 1487130000.0 2941200.0 2682100.0 2865600.0 2393200.0 2490400.0 2715600.0 2653800.0 2663300.0 3110700.0 3065400.0 True False 2778045.7728631604 2553247.8900858243 3050321.1611221107 2620649.008458182 2686380.3115623128 2698650.9330993276 2922072.002592103 2654061.633918895 2545875.294365612 3038242.9408451137 0.9143593277272366 0.8403698913476669 1.0039753964749236 0.8625541339130787 0.8841887774830385 0.8882275004475694 0.9617637758023733 0.8735514853794557 0.8379432928617139 1.0 21.534805803067844 -10.105368379194244 4.544226811455166 1.0000088157864422 0.8975126972087879 0.2818128351453476 0.04961865892015036 4.307862017102229e-06 8.481567028894672e-07 0.04670094630612328 0.011325669109431983 7.845698609553269e-11 10.105368379194244 -0.10249611857765428 DVTIGGSAPIY(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 1 DVTIGGSAPIYVK 13 0 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10;F5GZI3 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 DVTIGGS(0.014)APIY(0.986)VK 146.11 6.9358e-05 59073000.0 215490.0 200060.0 168260.0 161010.0 188970.0 194110.0 170310.0 203420.0 234120.0 215380.0 True False 203536.34013133487 190448.8173038177 179106.3088255187 176312.34199057842 203840.86390777794 192898.4874885515 187526.59686542352 202714.38349858506 191609.70968491922 213471.90076310447 0.9534572906492487 0.892149349038513 0.8390158526029045 0.8259276343177222 0.9548838192713037 0.9036247243735192 0.8784603322267077 0.9496068699155993 0.8975874998066078 1.0 17.70368665530062 -8.81927613261528 0.4282667300203544 1.0123301150262072 0.8857388785240795 0.3513777750664768 0.0419906690350882 3.9051246637149406 1.0762938420081836 0.13595033224492992 0.028368878601128567 1.5160861048296223e-09 8.81927613261528 -0.12659123650212767 DVTNFTVGGFAPMS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 23 DVTNFTVGGFAPMSPR 16 0 O00267;O00267-2 O00267 SUPT5H Transcription elongation factor SPT5 1 DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR;DVTNFTVGGFAPMS(1)PR 304.75 1.6506e-38 31588349000.0 8139827.0 7673987.0 7715778.0 5880556.0 6090262.0 7177327.0 6242067.0 6839059.0 8651377.0 7575380.0 True False 7688294.56996716 7305317.145630672 8213149.395561302 6439442.274186376 6569530.970549362 7132530.639898726 6873076.049063267 6815335.900577369 7080505.020266472 7508268.026756457 1.023977106646854 0.9729696808368389 1.0938806881018273 0.8576468302994492 0.8749728895050346 0.9499568494999441 0.915400998548584 0.90771078979736 0.9430277388918977 1.0 22.840048721087328 -5.26484284981277 24.999894226132838 0.9164245763702891 1.0245452103804882 0.5342591957724354 0.046405615119858516 220.66524617733927 1620879.716085149 0.01263095023556735 0.019656351712144287 5.4344694310669274e-06 5.26484284981277 0.10812063401019911 DVVAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 DVVASPK 7 0 A0A0J9YWL0;A0A494C1M5 A0A0J9YWL0 1 DVVAS(1)PK 76.282 0.020065 612340000.0 1621000.0 1487100.0 1281500.0 1398800.0 1497800.0 1590100.0 1343300.0 1384600.0 1532400.0 1450000.0 True False 1531079.8986166143 1415657.4838173918 1364107.540472497 1531741.531435445 1615668.3386837593 1580175.596082352 1479093.8733446286 1379797.1457680706 1254154.7886603875 1437154.1280829308 1.0653553913935274 0.9850422137434806 0.9491727531633137 1.0658157684720202 1.124213685305246 1.0995171396057586 1.0291824964644833 0.96008988792916 0.8726654741849766 1.0 20.45478336173665 -7.2970237368384305 3.559781340341319 0.9320611897593154 1.0461523392090393 0.41147856085098633 0.05591247808040555 0.254160128727294 6.776971268712573 0.036555909888294845 0.01681505708856488 5.046337155038358e-08 7.2970237368384305 0.11409114944972387 DVVAS(ph)PKLPER ddPTM_KYSE-520_SHP099_60min_R1 4 DVVASPKLPER 11 1 A0A0J9YWL0;A0A494C1M5 A0A0J9YWL0 1 DVVAS(1)PKLPER;DVVAS(1)PKLPER;DVVAS(1)PKLPER;DVVAS(1)PKLPER 165.51 2.6348000000000003e-05 1996400000.0 1795860.0 1802800.0 1779890.0 1397620.0 1630260.0 1485300.0 1291880.0 1348360.0 2021700.0 1332960.0 True False 1696240.0658418436 1716190.7819420332 1894624.5573246935 1530449.3845902237 1758552.1870894553 1476029.6917559402 1422475.8379337902 1343682.8538695904 1654610.2429096228 1321151.0114271888 1.2839108104753751 1.2990118215843458 1.4340711553314434 1.1584212337217514 1.3310758360543196 1.117230111462763 1.0766943563833358 1.0170547062731772 1.2524005421017017 1.0 20.33336394959963 -6.323933094077076 4.845974885137815 1.0896897162027896 1.3007807437533625 0.5781635286580218 0.08922445354836966 0.1602147168861824 7.679526627236172 0.031082776566542472 0.027556797672859387 4.74315050986929e-07 6.323933094077076 0.21109102755057285 DVVICPDASLEDAKK ddPTM_KYSE-520_SHP099_60min_R1 5 DVVICPDASLEDAKK 15 1 Q99497;K7ELW0;K7EN27 Q99497 PARK7 Protein deglycase DJ-1 0 ;;;; 213.83 1.0084e-13 4915580000.0 4550390.0 4631470.0 3338020.0 3064700.0 4477440.0 4567450.0 3333830.0 3802370.0 3974220.0 3680350.0 False True 4297970.795722429 4408967.229221804 3553194.110220841 3355968.1665643426 4829789.054851259 4538942.850340451 3670846.071445335 3789180.4659498325 3252601.829933365 3647744.962268969 1.1782541927078714 1.2086829739542262 0.9740796428955067 0.9200117336264826 1.3240478994033167 1.244314747135485 1.0063329836420354 1.0387734079942057 0.8916746821878092 1.0 21.798573434097634 -6.910373611615663 8.330848602342009 0.9835533828549881 1.1350976270328694 0.30058005980712266 0.11784631995106418 0.38568933626409824 31.58151766252252 0.05413931578273016 0.036450365441188064 1.229210859487249e-07 6.910373611615663 0.15154424417788137 DVVLSTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 DVVLSTSPK 9 0 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 DVVLS(0.101)T(0.149)S(0.75)PK;DVVLS(0.007)T(0.035)S(0.958)PK;DVVLST(0.025)S(0.975)PK;DVVLST(0.077)S(0.923)PK;DVVLST(0.007)S(0.993)PK;DVVLS(0.004)T(0.164)S(0.832)PK;DVVLST(0.025)S(0.975)PK 203.8 1.1146999999999999e-06 12996590000.0 47127500.0 42343100.0 39708200.0 34819700.0 36918900.0 40401300.0 36800600.0 39972900.0 47324200.0 40088700.0 True False 44513243.628657885 40308873.917711146 42267854.107366316 38128953.81907548 39824207.39019348 40149140.50059873 40520763.78724512 39834243.33964502 38731318.2259997 39733545.30653662 1.120293779103949 1.0144796696780007 1.0637825993446592 0.9596162014971976 1.0022817516775162 1.0104595547881738 1.0198124399581074 1.0025343329504461 0.9747762986462714 1.0 25.24385419078537 -1.0000000291411766 0.8656134912987444 0.9996931677492429 47.4312459006669 0.6660825782778513 0.024992179213994076 442.1192528285321 1.1336116446621982 0.008230269947426854 40470.39001755144 0.09999999328999634 1.0000000291411766 46.43155273291766 DVVMLDNLPDLPPALVPS(ph)PPKR ddPTM_KYSE-520_SHP099_60min_R1 2 DVVMLDNLPDLPPALVPSPPKR 22 1 H3BRE8;Q9BWH6-2;Q9BWH6;H3BPY8;H3BPM3 H3BRE8 RPAP1 RNA polymerase II-associated protein 1 1 DVVMLDNLPDLPPALVPS(1)PPKR;DVVMLDNLPDLPPALVPS(1)PPKR 199.87 3.6363e-14 2297500000.0 953920.0 1184850.0 732510.0 762040.0 781450.0 1121590.0 761680.0 961890.0 1162670.0 947230.0 True False 901004.1560076246 1127928.027503893 779728.766657439 834464.0524843192 842945.669157714 1114589.740777313 838678.0476804414 958553.4280968133 951558.4365255621 938838.2791337884 0.9597011285467917 1.2014082218127777 0.8305251117123701 0.888826191933962 0.8978603534737112 1.1872009967527957 0.8933147127897693 1.0209995154663003 1.0135488269646502 1.0 19.84051714031859 DVYLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 14 DVYLSPR 7 0 P38159;P38159-2;H3BT71;H3BUY5;H0Y6E7;Q96E39 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR;DVYLS(1)PR 105.98 0.0040222999999999995 205118100000.0 154827530.0 135143520.0 134368250.0 127449360.0 132616600.0 126992310.0 119908850.0 126784760.0 146500570.0 124715230.0 True False 146238938.2698708 128651022.44464089 143029842.39180148 139562108.85535267 143052771.93476346 126199703.88788429 132030406.75560187 126344973.25934558 119899759.46683381 123610350.0891807 1.1830638628914516 1.0407787240455473 1.1571024779770487 1.1290487305849657 1.157287976545295 1.020947710259177 1.0681177317299595 1.0221229303872366 0.9699815539744867 1.0 26.881224306525453 -6.7152250457531855 1.1004596197600864 0.9941094407544925 1.129493379099805 0.6339369740007081 0.04350378815568721 0.3394333989690634 0.8235912922566052 0.029058364230162916 0.01719796815093594 1.9265263535880847e-07 6.7152250457531855 0.13538393834531248 DWDAWK ddPTM_KYSE-520_SHP099_60min_R1 4 DWDAWK 6 0 P04181;P04181-2 P04181 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form 0 ;;; 129.96 0.055300999999999996 3614810000.0 5617070.0 6174950.0 3841750.0 3242590.0 5351890.0 6193540.0 4509180.0 4070350.0 4808500.0 4906410.0 False True 5305479.9297485575 5878296.133211091 4089395.3520173384 3550764.778679765 5773053.294911345 6154883.819482982 4965011.919755927 4056230.9058768335 3935397.612420697 4862943.024529219 1.091001869235797 1.208793955339456 0.8409301386814485 0.7301678758663873 1.187152155760705 1.265670559666661 1.0209891201093375 0.8341103083907747 0.8092625376382407 1.0 22.21339825801971 -7.199404726393471 5.872320141490436 0.8665721591205029 1.0498136903932802 0.18469641655307045 0.16150345425301973 0.38484643880456537 27.11947858821476 0.08602961445010862 0.048579669915399804 6.318227705758247e-08 7.199404726393471 0.1832415312727773 DWDHYK ddPTM_KYSE-520_SHP099_60min_R1 4 DWDHYK 6 0 O14646-2;O14646 O14646-2 CHD1 Chromodomain-helicase-DNA-binding protein 1 0 ;;; 127.66 0.012752 4128670000.0 8109200.0 8200000.0 5652160.0 5274640.0 7995000.0 8408300.0 6550050.0 6879270.0 7030180.0 6761120.0 False True 7659366.510710577 7806059.691549061 6016507.277375748 5775940.199721657 8624161.014672618 8355820.680799474 7212192.976327677 6855407.418003692 5753676.528415875 6701221.73687176 1.1429806103216775 1.164871123215967 0.8978224439689041 0.8619234561275628 1.286953536729038 1.2469100425111597 1.0762504599190366 1.0230085926396921 0.8586011259346545 1.0 22.675992714602387 -7.503715465799043 3.625608233685194 0.9292472876371787 1.0947878970287284 0.20518187309789426 0.13087262357901217 0.4086046031296675 11.36912620652443 0.101015758625502 0.03836991356184286 3.135339213593405e-08 7.503715465799043 0.1655406093915497 DWEAYWR ddPTM_KYSE-520_SHP099_60min_R1 2 DWEAYWR 7 0 Q8WXX5 Q8WXX5 DNAJC9 DnaJ homolog subfamily C member 9 0 ; 121.29 0.01867 149712000.0 196774.0 151764.0 125615.0 109613.0 159110.0 178345.0 157333.0 167731.0 102037.0 192071.0 False True 185858.5539607559 144473.02963759194 133712.3438911062 120030.58656364972 171631.0517879375 177231.8827012811 173237.7550621084 167149.18030970957 83509.65294344808 190369.400368977 0.9763047716729785 0.7589088863944101 0.7023835954304779 0.6305140759544576 0.9015684845110583 0.9309893415526207 0.9100084085275062 0.878025459899219 0.4386716183461646 1.0 17.538442075542182 -4.254126111607721 23.104897005556367 0.7939593430135179 0.9763050215666508 0.10406490700914794 0.1599695534620409 747.8469512971018 2362502.1655962053 0.040019377401100224 0.38165603358357925 5.570239753145682e-05 4.254126111607721 0.18234567855313288 DWEDDS(ph)DEDMSNFDR ddPTM_KYSE-520_SHP099_60min_R1 28 DWEDDSDEDMSNFDR 15 0 A0A087WYT3;Q15185-4;Q15185;B4DDC6;Q15185-2 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 1 DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(0.997)DEDMS(0.003)NFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR;DWEDDS(1)DEDMSNFDR 436.17 2.3794999999999992e-113 282984750000.0 23617790.0 20669270.0 19465340.0 19811790.0 21259990.0 20654570.0 20335000.0 21133910.0 24651990.0 20402120.0 True False 22307664.1078029 19676287.243993226 20720106.962045167 21694696.564968113 22933030.260203842 20525657.167206284 22390660.250474945 21060601.39890169 20175810.042096037 20221373.08940919 1.1031725693981875 0.9730440735648437 1.0246636996622738 1.072859714770337 1.1340985678274669 1.015047646688071 1.1072769465987402 1.0415020436931675 0.9977467876631475 1.0 24.26937762792248 -7.671445390130933 4.251717201444093 0.9985591193329326 1.0590170820693328 0.22581132328542164 0.045463462234355365 0.34335514375482895 10.91946173374379 0.0362490716421991 0.011990156446539392 2.1308584930916634e-08 7.671445390130933 0.06045796273640014 DWEDDSDEDMSNFDR ddPTM_KYSE-520_SHP099_60min_R1 2 DWEDDSDEDMSNFDR 15 0 A0A087WYT3;Q15185-4;Q15185;B4DDC6;Q15185-2 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 0 ; 287.13 3.7684999999999997e-32 637150000.0 466490.0 552930.0 1049870.0 307790.0 605960.0 508070.0 429660.0 392740.0 842970.0 603550.0 False True 440612.8697752404 526366.4128351489 1117546.3000513937 337042.2690595623 653645.6045592271 504898.9466710024 473094.22587750567 391377.6766062053 689907.8975444052 598203.0165547945 0.7365607621185924 0.8799126688906198 1.868172291219177 0.5634245560991579 1.0926818930531992 0.844026079271291 0.7908589772786124 0.6542556051626925 1.1533005993813985 1.0 19.190275659982124 DWEQFHQPR ddPTM_KYSE-520_SHP099_60min_R1 7 DWEQFHQPR 9 0 Q9H773 Q9H773 DCTPP1 dCTP pyrophosphatase 1 0 ;;;;;; 207.83 1.6519e-08 11945800000.0 7822540.0 6451630.0 4710980.0 4398406.0 7891700.0 6869320.0 5579370.0 5162550.0 5292080.0 5203740.0 False True 7388608.112353122 6141684.010705933 5014657.308634511 4816429.183811013 8512731.892369224 6826446.025835131 6143387.169003811 5144642.318998226 4331171.674480465 5157638.912048455 1.4325562991804315 1.1907937169387155 0.9722777018996166 0.9338438122451025 1.6505094748845512 1.3235602845108592 1.1911239374770124 0.9974801273854459 0.8397586082194841 1.0 22.298279342445063 -7.298981309517192 3.1374997627493855 0.9208118658435757 1.2398203153373257 0.3243113180017987 0.19865365695118367 0.34793708112884947 6.894641862093097 0.13303398474715658 0.059397625524194204 5.023642090178274e-08 7.298981309517192 0.31900844949375007 DWHRPCLK ddPTM_KYSE-520_SHP099_60min_R1 2 DWHRPCLK 8 1 P50238 P50238 CRIP1 Cysteine-rich protein 1 0 ; 143.45 0.00055117 2468100000.0 1654980.0 1310380.0 1072940.0 1129410.0 1423940.0 1287010.0 1201300.0 1263810.0 1224070.0 976730.0 False True 1563174.9602791616 1247427.3778795202 1142103.4291646986 1236748.7868305002 1535995.976889671 1278977.2931978793 1322739.12755818 1259426.1380854712 1001809.7442936053 968076.9320844406 1.6147218350853272 1.2885622377072747 1.1797651522442005 1.2775315120540696 1.5866466041933263 1.321152535309374 1.3663574492061172 1.3009566660923366 1.0348451771663767 1.0 19.88476217599296 -7.733788735748671 3.0641781817166804 0.9947476939558194 1.366585599984736 0.5542064159194537 0.12692554556414332 0.19690993408985286 3.490588527104946 0.11811284920156041 0.03426213305985311 1.8459131524900685e-08 7.733788735748671 0.37183790602891664 DWPHAGRPAHELR ddPTM_KYSE-520_SHP099_60min_R1 1 DWPHAGRPAHELR 13 1 B0V3J0;A9C4B9;A0A0G2JNL0;A0A0G2JNK5;A0A590UJ73;A0A590UJW4;E7EQB3;Q9BSV6 B0V3J0 TSEN34 tRNA-splicing endonuclease subunit Sen34 0 143.94 9.8087e-06 371160000.0 204680.0 171020.0 165930.0 130000.0 182230.0 182910.0 149220.0 131690.0 162630.0 128380.0 False True 193325.99238053555 162803.94249374635 176626.11329738674 142355.16091407478 196570.464253132 181768.39084298039 164304.61384685888 131233.19812667713 133100.49156867573 127242.6530781285 1.5193489581031534 1.279476170571379 1.3881046097721352 1.1187691978307543 1.5448472622811111 1.4285177685769601 1.2912699466111721 1.0313616932059597 1.0460367522119367 1.0 16.957222832712283 -7.189875238136414 3.3527871902703765 1.023118051644702 1.3708042126268083 0.6588881278169736 0.1138429017930438 0.158538791710537 3.4729060116920625 0.06235930433706894 0.03200976860725834 6.458397358733071e-08 7.189875238136414 0.34768616098210625 DWQSGR ddPTM_KYSE-520_SHP099_60min_R1 2 DWQSGR 6 0 Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98 Q60FE5 FLNA Filamin-A 0 ; 127.95 0.056596 5288100000.0 2180110.0 2099720.0 1702770.0 1483560.0 2186970.0 2143980.0 1746940.0 2168290.0 2031220.0 1876640.0 False True 2059174.9523584612 1998846.2994560264 1812533.2787283296 1624557.0963514235 2359072.0968428515 2130598.6255510016 1923537.7436914071 2160768.7080726884 1662401.6508892947 1860014.429603826 1.1070747191983104 1.0746402111954427 0.9744726975663249 0.8734110179443318 1.2683084922869778 1.1454742455975508 1.0341520544553577 1.1616945942365198 0.8937573947979415 1.0 20.826882382827982 -2.873084786613265 2.007365870276599 1.0546394407749613 11.578800034865026 0.020287054968797236 0.11587750056471818 1753.1438566151587 46.28004575991742 0.03151671785481124 83592.71246238291 0.0013394151700293715 2.873084786613265 10.524160594090064 DWQSYYYHHPQDR ddPTM_KYSE-520_SHP099_60min_R1 2 DWQSYYYHHPQDR 13 0 Q1KMD3 Q1KMD3 HNRNPUL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 0 ; 179.39 2.3868e-07 4716800000.0 1466680.0 1840230.0 1708920.0 2016360.0 1569160.0 1493110.0 1530640.0 1324700.0 1446740.0 1114790.0 False True 1385320.336645905 1751822.5885584576 1819079.7175686746 2207994.248159262 1692643.9647008989 1483790.9466489688 1685372.0288068352 1320104.9248873054 1184048.485347513 1104913.827893497 1.253781337217038 1.5854834506852749 1.6463543777316327 1.9983406781764805 1.5319239582039637 1.3429019613934925 1.5253425074966922 1.1947582621932311 1.0716206598707207 1.0 20.07550242770247 -7.30262392566044 1.0251487806129025 0.9885344698129286 1.6090760831817286 0.587427511870704 0.18376952415333916 0.39623170297028737 0.7392997872593448 0.17455857715229942 0.06867425422629587 4.981682836770358e-08 7.30262392566044 0.6205416133688 DWSHYFK ddPTM_KYSE-520_SHP099_60min_R1 5 DWSHYFK 7 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;;; 134.66 0.0038023 22743400000.0 38435870.0 39568060.0 35113160.0 25094578.0 31653185.0 36338480.0 21127298.0 25627278.0 27430844.0 24987735.0 False True 36303755.671092704 37667151.00473109 37376610.47664242 27479559.14815998 34144110.577513434 36111678.06724525 23263051.464398302 25538382.95406968 22450094.204904757 24766363.108063653 1.4658492856899366 1.5208995701297412 1.5091683148452675 1.1095516539209966 1.3786485495884735 1.4580937019165197 0.9393002663691106 1.0311721120552686 0.9064752102255682 1.0 24.561878691407344 -6.763340685817901 24.999298135401112 0.971834497187055 1.4020409953920099 0.7815050381911204 0.11338381284522119 25.48844932731815 335124.9348978964 0.049423403350543696 0.03524142443743164 1.7244845753807157e-07 6.763340685817901 0.43020649820495493 DWSQIT(ph)AEVT(ph)S(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 DWSQITAEVTSPK 13 0 B4DV78;P09327 B4DV78 VIL1 Villin-1 3 DWS(0.326)QIT(0.741)AEVT(0.933)S(1)PK 104.55 0.001911 578570000.0 1214500.0 1106500.0 918060.0 923320.0 1057100.0 991720.0 875380.0 952790.0 1171600.0 955270.0 True False 1147129.2639542741 1053342.0791096387 977239.6165479352 1011072.0551937192 1140287.7559237564 985530.3076201448 963871.9532855053 949484.9938728586 958866.9736325439 946807.0509888137 1.2115765960511706 1.1125203155273964 1.0321423098057187 1.0678755023399849 1.2043507224971317 1.040898783538726 1.018023632459084 1.0028283934738849 1.0127374660245032 1.0 19.852710924477144 -6.496423209054329 15.698532334409556 1.011606257570521 1.1171610458204282 0.5406371321297772 0.05142892314032114 6.60777616353287 3920.9955140823727 0.019220978029932567 0.016764673427297774 3.1884292965492005e-07 6.496423209054329 0.10555478824990727 DWVLNEFK ddPTM_KYSE-520_SHP099_60min_R1 2 DWVLNEFK 8 0 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ; 97.431 0.023826 3479000000.0 1723100.0 1796760.0 1276480.0 1140970.0 1737150.0 1840190.0 1565520.0 1463590.0 1541850.0 1689110.0 False True 1627516.2080853085 1710440.952608258 1358763.9432402137 1249407.44575486 1873853.8219685478 1828704.6916261804 1723778.0396028305 1458513.1478944723 1261888.9068755005 1674145.7995076932 0.9721472338692981 1.021679804179085 0.8116162544742387 0.7462954816254752 1.1192895042472297 1.0923210464488442 1.029646306856746 0.8711984035819158 0.7537509022491214 1.0 20.674993745400677 -10.780483306343253 2.591972600641428 1.0162511450215388 0.9395847548637112 0.021425081649323774 0.1282500543163576 134532117.2940705 99724670.6852085 13898966.35921052 0.03502951804183209 1.6577410568118725e-11 10.780483306343253 -0.07666639015782761 DWVLNEFR ddPTM_KYSE-520_SHP099_60min_R1 5 DWVLNEFR 8 0 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2;A0A0U1RQJ0 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 ;;;; 124.08 0.0067442 993771000.0 1142964.0 1131048.0 766906.0 763540.0 1277115.0 1118456.0 973802.0 948810.0 933425.0 949459.0 False True 1079561.5084777533 1076710.756342339 816341.9878529861 836106.6120333283 1377616.6847096453 1111475.3012338122 1072243.4095516596 945518.799563918 763938.5497293932 941047.5319279239 1.1471912648939802 1.144161925738737 0.8674822048367168 0.8884849953544821 1.463918280394745 1.1811043156945888 1.1394147194190656 1.0047513727886135 0.8117959229586549 1.0 19.84390806917048 -7.490716618477497 4.329093884052827 0.903802789518845 1.11567410296659 0.2219926886917064 0.16103421805223736 0.33403494310871046 14.415075736771394 0.1122726628885121 0.04592976883347922 3.2306014340823786e-08 7.490716618477497 0.211871313447745 DWVRQHR ddPTM_KYSE-520_SHP099_60min_R1 2 DWVRQHR 7 1 Q9UHH9 Q9UHH9 IP6K2 Inositol hexakisphosphate kinase 2 0 ; 58.687 0.051765 1472460000.0 2989500.0 2321700.0 2180500.0 1425610.0 3561300.0 2441100.0 1764310.0 2001760.0 2375700.0 2166510.0 False True 2823666.4755794997 2210162.04705725 2321058.5189233543 1561099.5457747236 3841554.048974808 2425864.1894199313 1942663.672806269 1994816.3617742967 1944332.7665234145 2147316.4069192754 1.3149745731373488 1.0292670609396304 1.0809112767192723 0.7270002412054455 1.7890023270889228 1.1297190211945916 0.9046937221484659 0.9289811018750757 0.9054710150112071 1.0 21.034103357195587 -6.707598052778413 5.948637625648028 0.928878725281924 1.1765282327780773 0.18444564407790354 0.25188372443577806 0.36267926122765537 27.243167932254483 0.10072830174355803 0.07644721561045349 1.9606584581002472e-07 6.707598052778413 0.24764950749615333 DWYPHSR ddPTM_KYSE-520_SHP099_60min_R1 7 DWYPHSR 7 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 0 ;;;;;; 145.34 0.0025451000000000002 52880810000.0 11407940.0 8805040.0 6267370.0 6713740.0 10946450.0 8968000.0 7681150.0 8226970.0 8473560.0 7295380.0 False True 10775118.827035408 8382032.66176552 6671374.698346554 7351811.831040467 11807873.338219272 8912027.385489302 8457635.602799885 8198432.561259228 6934975.105064675 7230748.6089197565 1.4901802579256267 1.159220589058449 0.9226395576962576 1.0167428337878277 1.633008416812228 1.2325179407420612 1.1696763447655554 1.1338290133812354 0.9590950370629372 1.0 22.785713588349324 -7.525372490628528 2.03649855099733 0.9766752450179893 1.2268555660723899 0.20775426665771912 0.19505846775145952 0.6222254746427336 4.6879519299650685 0.17958712917112363 0.058614227424426645 2.98282317977529e-08 7.525372490628528 0.2501803210544006 DY(ph)LLSES(ph)EDEGDNDGERK ddPTM_KYSE-520_SHP099_60min_R1 1 DYLLSESEDEGDNDGERK 18 1 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 2 DY(0.681)LLS(0.604)ES(0.715)EDEGDNDGERK 71.842 0.012519 369670000.0 913390.0 802130.0 757210.0 709860.0 839010.0 782330.0 729480.0 819670.0 1043900.0 782890.0 True False 862722.4359021775 763594.4707783244 806020.9681788373 777324.8809728081 905035.3136861142 777447.1882794218 803222.957438724 816826.7560824171 854354.0745775107 775954.2036792034 1.1118213314800804 0.9840715691180291 1.0387481172949018 1.001766440966626 1.1663514539838433 1.0019240627773383 1.0351422205462968 1.052673923550405 1.1010367242378127 1.0 19.565611982423217 DY(ph)VST(ph)EDS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 DYVSTEDSPR 10 0 A8MX12;P52179-2;P52179 A8MX12 MYOM1 Myomesin-1 3 DY(0.982)VS(0.16)T(0.859)EDS(0.999)PR 89.266 0.0049212 242760000.0 6585.6 6974.6 5373.0 7044.4 5842.2 6794.5 5234.9 6298.8 5842.3 5811.3 True False 6220.283639931872 6639.52974691197 5719.352177103961 7713.897658023909 6301.947902429067 6752.093005208191 5764.09477970058 6276.95093295097 4781.485592397928 5759.8164031229835 1.0799447768090702 1.1527328793521967 0.9929747368341321 1.3392610316261848 1.0941230520841148 1.1722757346132062 1.0007427973876524 1.0897831621069718 0.8301454868952762 1.0 12.491807110474562 -7.227920833646477 1.451714902964167 0.937725446324385 1.138284896314889 0.3692011923297136 0.10163894947824988 0.4557903922878867 1.7298215142050775 0.07788705741365824 0.030667266651218387 5.916694781571291e-08 7.227920833646477 0.200559449990504 DYAFIHFDER ddPTM_KYSE-520_SHP099_60min_R1 9 DYAFIHFDER 10 0 O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 ;;;;;;;; 160.18 4.2258e-05 9460390000.0 10139980.0 9412890.0 6368560.0 6149660.0 10141990.0 8927770.0 7578170.0 7672880.0 7007800.0 7998700.0 False True 9577495.095851012 8960680.635364067 6779087.567656284 6734121.837437294 10940106.912970556 8872048.475841869 8344245.379411947 7646264.570143646 5735360.172261983 7927837.740894429 1.2080841471372579 1.1302805289696949 0.8550991820490335 0.8494273038284386 1.3799610020444588 1.1191006634856924 1.0525247428273599 0.9644829801071312 0.7234457060942461 1.0 22.918496004502146 -7.418009724519266 3.268999494759961 0.8575148281572168 1.0817412609236912 0.23945636172163798 0.15962443750456723 0.38803962028585165 7.6836853812018 0.11249298728021159 0.04559095106733066 3.8193571861801294e-08 7.418009724519266 0.22422643276647436 DYAFVHFEDR ddPTM_KYSE-520_SHP099_60min_R1 6 DYAFVHFEDR 10 0 B4DT28;O43390-4;O43390-3;O43390;O43390-2;A0A286YEZ8 B4DT28 HNRNPR Heterogeneous nuclear ribonucleoprotein R 0 ;;;;; 157.38 0.00015789 3646770000.0 4057860.0 3831670.0 2419050.0 2287780.0 3783080.0 3486710.0 2895390.0 3042580.0 2750530.0 3209130.0 False True 3832762.416656635 3647590.8217460774 2574985.833616851 2505209.923353863 4080786.8732192237 3464948.1495605996 3188084.277483293 3032026.000123507 2251103.0872187796 3180699.6048653573 1.205006097021501 1.1467888436136944 0.8095658671060995 0.7876285831965296 1.2829840538782875 1.0893666740048138 1.0023217133132094 0.9532575775107992 0.7077383490648974 1.0 21.60091269504152 -7.4276036777583245 3.2528013395498 0.848989950790037 1.0420378300383424 0.18020750458060353 0.16211670427754418 0.4596316076514537 9.077625292108154 0.1156350733802843 0.046378408936077385 3.735909285461064e-08 7.4276036777583245 0.19304787924830535 DYAFVHMEK ddPTM_KYSE-520_SHP099_60min_R1 1 DYAFVHMEK 9 0 Q96PK6;Q96PK6-2 Q96PK6 RBM14 RNA-binding protein 14 0 96.89 0.0051308 530140000.0 486390.0 410180.0 308580.0 418180.0 539540.0 504750.0 387260.0 416550.0 390700.0 418770.0 False True 459408.97710557387 390474.33710726764 328471.56054545724 457923.70146959834 581998.7284373319 501599.6680224946 426408.02009338245 415105.0852735011 319758.72874550574 415060.02359813004 1.1068494940153124 0.9407659492770936 0.7913832743947666 1.1032710341504 1.4022037665589193 1.2084991073680325 1.0273406154533442 1.0001085666477356 0.7703915351171062 1.0 18.662960460259185 -7.432444660769576 2.926522237321646 0.8859206701613221 1.0847246611700374 0.1906164989501552 0.15980297926766243 0.5058118058986477 8.175809676325386 0.12766364065506752 0.04918319683157678 3.69449717856532e-08 7.432444660769576 0.19880399100871526 DYAFVHMER ddPTM_KYSE-520_SHP099_60min_R1 3 DYAFVHMER 9 0 E9PB51;Q9BWF3;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-4;Q9BWF3-2;Q9BQ04;E9PLB0;E9PM61;U3KQD5 E9PB51;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B 0 ;; 129.7 0.00099427 1904070000.0 1329140.0 1098760.0 781965.0 766000.0 1354940.0 1238500.0 937480.0 937170.0 928650.0 1026680.0 False True 1255409.9546250992 1045973.9203276163 832371.7150882364 838800.4096937032 1461566.0694459672 1230770.0621017504 1032249.6273231003 933919.1760071225 760030.569361439 1017584.4139449535 1.2337157855613647 1.0278989202208817 0.8179878776457594 0.8243054809004556 1.436309410223564 1.2095016838262318 1.014411790488509 0.9177805430278958 0.7468968263919902 1.0 19.956717047873028 -7.232688552702741 3.2483959689819812 0.8668427850085102 1.0807878649748393 0.19276781751535021 0.1840088684976779 0.4615629744681066 9.98806590354208 0.11506777082171943 0.056034324678828865 5.8520960734967576e-08 7.232688552702741 0.21394507996632905 DYASHLS(ph)PGSIIQPQR ddPTM_KYSE-520_SHP099_60min_R1 2 DYASHLSPGSIIQPQR 16 0 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J330 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 DYASHLS(1)PGSIIQPQR;DYASHLS(1)PGSIIQPQR 214.81 4.8857e-18 819910000.0 368430.0 354500.0 358020.0 321150.0 311490.0 301240.0 292690.0 336660.0 438990.0 343390.0 True False 347992.4534530036 337469.28788465133 381098.542052254 351671.99944273144 336002.49086433725 299359.8494206954 322277.9615791257 335492.20503703493 359280.48203734244 340347.8317533771 1.022461202882485 0.9915423469751626 1.1197325397636313 1.0332723368061885 0.9872326470638761 0.8795703145175832 0.9469076383382246 0.9857333402380519 1.0556273568320669 1.0 18.37665039325118 -5.794466326602498 4.242585550670927 0.9676927395216964 1.044500295890681 0.28135297879106813 0.05139321694510941 0.26847890973580196 10.643952467849774 0.01714115295906682 0.020471469193057156 1.6052167151353873e-06 5.794466326602498 0.07680755636898462 DYDDMS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 14 DYDDMSPR 8 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR;DYDDMS(1)PR 208.15 1.2174e-08 79795370000.0 49430720.0 43581480.0 42805620.0 39839740.0 43158890.0 40580640.0 40688050.0 41194840.0 49930370.0 41273000.0 True False 46688699.42390267 41487760.283664905 45564938.756613545 43626096.91134544 46555249.10250704 40327361.173135914 44801195.171100914 41051944.71498792 40864273.450198986 40907353.32990809 1.1413277961878736 1.0141883281735675 1.1138569241853205 1.0664609993101075 1.1380655386587837 0.9858218117389635 1.0951868435435046 1.003534606209151 0.9989468915438827 1.0 25.2858568633457 -7.049309502899809 0.8813179558928977 0.9933012464042025 1.0868799409651042 0.3664598332571588 0.04697079234499536 0.665980088177653 0.9523933263465396 0.038224263910493286 0.018173507393110716 8.926690903305509e-08 7.049309502899809 0.09357869456090173 DYDDMSPR ddPTM_KYSE-520_SHP099_60min_R1 1 DYDDMSPR 8 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 110.12 0.008232999999999999 563540000.0 1075700.0 1300500.0 1005100.0 708840.0 1113400.0 1309200.0 880980.0 1018300.0 1214200.0 1239200.0 False True 1016028.7766452146 1238022.0279097036 1069890.3542168606 776207.940479483 1201018.2456205739 1301028.7971769178 970038.0559362386 1014767.7549730056 993731.8874911531 1228221.652083012 0.8272356825187642 1.007979321818721 0.8710889865867222 0.6319770858648087 0.9778513866643677 1.059278506424657 0.7897907143153641 0.8262089772249189 0.8090818833928108 1.0 20.228139510736558 -10.281341232099868 3.5020738886672254 1.0003949394310292 0.8695780180306673 0.10405435595312029 0.11705569098506201 105941060.04699393 163416028.52871212 445743.79143241025 0.030397614813865954 5.231891969531047e-11 10.281341232099868 -0.13081692140036194 DYDEEEQGYDS(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 2 DYDEEEQGYDSEK 13 0 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGYDS(1)EK;DYDEEEQGY(0.004)DS(0.996)EK 166.52 6.2718e-06 1755720000.0 3897900.0 3240500.0 2836200.0 3402900.0 3276900.0 3413100.0 3714100.0 3838300.0 3748700.0 3465500.0 True False 3681675.7167289928 3084821.5159103326 3019025.9900804465 3726310.5928808064 3534773.3869894594 3391797.576874836 4089557.474122894 3824985.8331659525 3068030.5770367985 3434798.3661182057 1.0718753546193724 0.8981084730736625 0.8789529015330122 1.08487025894683 1.0291065181168813 0.9874808403114601 1.1906251949061732 1.113598361667067 0.8932199943090385 1.0 21.711793979942673 -5.272065682109853 24.90040739476062 1.050729768718353 0.9444918638140428 0.18224343061742576 0.08900164515736685 1002.9272550450404 2350137.411428993 0.025383818049110798 0.038090115271954335 5.344835187197812e-06 5.272065682109853 -0.10623790490431018 DYDEEEQGYDS(ph)EKEK ddPTM_KYSE-520_SHP099_60min_R1 12 DYDEEEQGYDSEKEK 15 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK;DYDEEEQGYDS(1)EKEK 271.05 1.8766999999999998e-25 45053900000.0 15181655.0 12948642.0 11771616.0 13853449.0 12830501.0 12969464.0 13887341.0 13870658.0 14859972.0 13167950.0 True False 14339498.333271079 12326569.802012118 12530433.202611534 15170076.62776869 13840188.433135472 12888516.764397608 15291208.955667114 13822543.924833909 12161775.674209924 13051292.207510069 1.0987033395068528 0.9444712144992872 0.9600913843152773 1.1623428842578067 1.060445832725395 0.9875280209404249 1.1716241359509318 1.0590938969920574 0.9318445622734358 1.0 23.63768931921155 -3.9226835997057194 20.096968022794577 1.0375478235328208 3.287840277903445 0.05497785901133734 0.08017890689721908 1373.2620612007713 384318.12616250676 0.01979927267380021 10664.15875021966 0.00011948582878301425 3.9226835997057194 2.2502924543706238 DYDEEEQGYDS(ph)EKEKK ddPTM_KYSE-520_SHP099_60min_R1 11 DYDEEEQGYDSEKEKK 16 2 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGY(0.003)DS(0.997)EKEKK;DYDEEEQGYDS(1)EKEKK;DYDEEEQGYDS(1)EKEKK;DYDEEEQGYDS(1)EKEKK;DYDEEEQGYDS(1)EKEKK;DYDEEEQGYDS(1)EKEKK;DYDEEEQGYDS(1)EKEKK;DYDEEEQGYDS(1)EKEKK;DYDEEEQGYDS(1)EKEKK;DYDEEEQGYDS(1)EKEKK;DYDEEEQGYDS(1)EKEKK 257.75 2.0529e-29 48933100000.0 19265800.0 17377880.0 16286530.0 16764530.0 16193440.0 16649710.0 16454670.0 17281090.0 20532710.0 16389080.0 True False 18197087.668579865 16543020.560070343 17336385.783169378 18357825.890760243 17467771.599929962 16545792.98399365 18118068.625703607 17221145.932226736 16804487.45149766 16243885.501711285 1.1202423008129927 1.0184152405117326 1.0672560934600899 1.1301376070907576 1.075344417940507 1.0185859154357224 1.1153777600682349 1.060161740884747 1.0345115674280834 1.0 23.953393427496565 -7.9156010620117385 2.2645824817271922 1.0010522512229854 1.0753870366229004 0.3179688368224197 0.03640972558130994 0.3457996706366285 3.8340084517805044 0.0345275526977716 0.009594857433481032 1.214503967797668e-08 7.9156010620117385 0.074334785399915 DYDEEEQGYDS(ph)EKEKKEEK ddPTM_KYSE-520_SHP099_60min_R1 4 DYDEEEQGYDSEKEKKEEK 19 3 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 DYDEEEQGYDS(1)EKEKKEEK;DYDEEEQGYDS(1)EKEKKEEK;DYDEEEQGYDS(1)EKEKKEEK;DYDEEEQGY(0.001)DS(0.999)EKEKKEEK 278.67 1.8647e-33 7499920000.0 4582690.0 5578880.0 5505120.0 3636110.0 4149950.0 4117870.0 2858870.0 3580340.0 7626090.0 2935560.0 True False 4328479.050333976 5310862.230730395 5859988.843703439 3981684.8011636618 4476527.455014467 4092168.8458836786 3147872.4794824338 3567920.6361976354 6241384.294084504 2909553.2222311194 1.4876782515134017 1.8253188118888888 2.0140510917376693 1.368486670304111 1.5385618042009048 1.4064595260249955 1.0819092276540538 1.2262778384447848 2.145134945941443 1.0 21.47236620577142 -5.282686500183127 24.282289759291082 1.3980707292291121 1.7806463327057676 0.23140003515142926 0.3176512613863582 791.734696058603 904832.7943516952 0.08891775821444327 0.13204736796572555 5.2157107654707545e-06 5.282686500183127 0.3825756034766554 DYDGWTPLHAAAHWGK ddPTM_KYSE-520_SHP099_60min_R1 3 DYDGWTPLHAAAHWGK 16 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;F8VW28;H0YHL8 O14974-5;H0YHL8 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 0 ;; 189.1 4.4234e-12 1774540000.0 1717930.0 1926070.0 1215260.0 1368140.0 2241080.0 2168140.0 1628820.0 1403240.0 1367620.0 1219130.0 False True 1622632.9982914487 1833538.7061099906 1293597.6040847504 1498167.614253709 2417440.245999065 2154607.8340293006 1793477.0213512958 1398372.4879586773 1119294.6828946215 1208329.4566687867 1.3428729965458635 1.5174162112747194 1.0705669690872532 1.2398668310081342 2.0006466222081896 1.7831294454819344 1.484261607174328 1.1572774960016414 0.9263158128912764 1.0 20.20458243516202 -7.410714189217443 3.0692663134764873 0.9746472773281284 1.4977719199927533 0.43601881108683016 0.24752503866768502 0.2875761659868275 5.059734946361214 0.19012565584561356 0.07597251277387969 3.884058932347034e-08 7.410714189217443 0.5231246426646249 DYDRDKDDK ddPTM_KYSE-520_SHP099_60min_R1 8 DYDRDKDDK 9 2 Q15293;Q15293-2 Q15293 RCN1 Reticulocalbin-1 0 ;;;;;;; 152.54 0.0001597 29688320000.0 22801370.0 29113600.0 12915980.0 12938680.0 28113800.0 39859700.0 20368390.0 22854520.0 23439900.0 41941300.0 False True 21536532.552695796 27714938.9555955 13748564.737098696 14168368.257044002 30326196.11435933 39610920.827095 22427425.637529936 22775243.00440509 19183805.031793665 41569732.711837605 0.5180820550853084 0.6667095780412188 0.3307349804821715 0.3408337589096248 0.7295258866488572 0.952878891516548 0.5395133471989679 0.5478804293085939 0.4614849261787721 1.0 25.309030135855657 -5.775840350598999 24.998782731997835 0.6867061863318377 0.4690375359655746 0.288062852921106 0.1842663472861457 361.1110611221946 626853.8060881828 0.05995156552272384 0.0682822771792067 1.6755587088165576e-06 5.775840350598999 -0.21766865036626304 DYDRDKDDKISWEEYK ddPTM_KYSE-520_SHP099_60min_R1 5 DYDRDKDDKISWEEYK 16 3 Q15293;Q15293-2 Q15293 RCN1 Reticulocalbin-1 0 ;;;; 252.76 5.3836000000000006e-24 12737400000.0 10201440.0 13785140.0 12695490.0 10050340.0 9090460.0 9269330.0 8411290.0 8739250.0 16483000.0 6494540.0 False True 9635545.787133537 13122881.182483012 13513861.598902209 11005521.29185509 9805827.48435783 9211476.673186617 9261585.279479595 8708935.581506286 13490102.702616252 6437003.4282756625 1.4968992784449544 2.038663071832223 2.0994025790852016 1.709727424334033 1.523352844785513 1.4310193828270459 1.4388038444715538 1.3529487250621561 2.0957115920365395 1.0 22.617957806535163 -5.609681195816316 3.358172005331839 1.4864636156929065 1.8965194443145363 0.2793696909593866 0.29261757374088254 0.31017433781215725 6.957348815507957 0.08713681569691097 0.1173850218972999 2.456511514630114e-06 5.609681195816316 0.4100558286216298 DYDS(ph)PERER ddPTM_KYSE-520_SHP099_60min_R1 4 DYDSPERER 9 1 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-3;P52756-4;P52756-2;P52756-5 P52756 RBM5 RNA-binding protein 5 1 DYDS(1)PERER;DYDS(1)PERER;DY(0.002)DS(0.998)PERER;DYDS(1)PERER 87.667 0.010699 1724470000.0 2596400.0 2314780.0 2118250.0 2129340.0 2248580.0 2302480.0 2196000.0 2219790.0 2538970.0 2177580.0 True False 2452372.5162049206 2203574.4942443864 2254795.7843198315 2331711.833390584 2425530.4533298993 2288109.3682584115 2417993.1108946647 2212090.066592879 2077957.050225177 2158288.3353316067 1.1362580597129206 1.0209824415818018 1.0447148082155562 1.0803523306965064 1.1238213234179542 1.0601499951612623 1.12032904561992 1.0249279627659231 0.9627800957863736 1.0 21.041456183068306 -7.500360639306751 5.107843699833502 0.9838209193394566 1.0802276610529338 0.5801255282458644 0.03544031664426984 0.13002531993720737 9.74285430351905 0.022295158250932208 0.009340782504101539 3.159652786289561e-08 7.500360639306751 0.09640674171347718 DYDTLSKCS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 DYDTLSKCSPK 11 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 DYDT(0.004)LS(0.016)KCS(0.98)PK 54.276 0.041569 605480000.0 1346200.0 1301300.0 1104200.0 922510.0 1143100.0 1110700.0 764540.0 830990.0 1470600.0 1053900.0 True False 1271523.6024168334 1238783.5947088785 1175378.4987824678 1010185.0730372546 1233055.4666506895 1103767.709306754 841827.1643913513 828107.4896445249 1203576.110809166 1044563.2659217922 1.2172777311815155 1.1859344810634265 1.125234379887211 0.9670884531305052 1.180450726995994 1.0566786573072868 0.8059130469694116 0.7927786824034517 1.152229022477686 1.0 19.994468443890515 -6.561765833050395 7.281240387316832 0.9209795049910728 1.1273132550165563 0.3970861098578514 0.11377989882189525 0.2073589072816516 30.69087859932052 0.04416980917493893 0.034316737816538184 2.74305279805564e-07 6.561765833050395 0.2063337500254835 DYDWINAER ddPTM_KYSE-520_SHP099_60min_R1 2 DYDWINAER 9 0 O95347;O95347-2;A0A0C4DGE5 O95347 SMC2 Structural maintenance of chromosomes protein 2 0 ; 148.69 0.0022366 464050000.0 428100.0 447950.0 313380.0 260930.0 469230.0 461480.0 351370.0 354920.0 379120.0 389520.0 False True 404352.4396038076 426429.80961334193 333580.9762257286 285728.70874853514 506155.73144650843 458599.7321426855 386889.90864073683 353688.86535895034 310281.3648374613 386069.1558419747 1.0473575355222537 1.1045425493350927 0.8640446178566761 0.7400972194357044 1.311049390471606 1.187869388691592 1.002125921706882 0.9161282635687212 0.8036937427978972 1.0 18.558499772328755 -7.2363888097275515 3.958439244465853 0.8918795474006538 1.0392025513237517 0.1302808331902756 0.15515003854091086 0.48138186301883334 17.191709718005185 0.09090830366854735 0.0463313425093648 5.802447106962355e-08 7.2363888097275515 0.14732300392309794 DYEEMAS(ph)RLGRLDAVLQR ddPTM_KYSE-520_SHP099_60min_R1 1 DYEEMASRLGRLDAVLQR 18 2 P29590-12;P29590-13;P29590-11;H3BT57;H3BUJ5;P29590-14;P29590-10;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4;H3BT29 P29590-12;P29590-2 PML Protein PML 1 DYEEMAS(1)RLGRLDAVLQR 49.592 0.064193 7221000000.0 497730.0 542150.0 430600.0 894980.0 674290.0 729340.0 800530.0 1125700.0 1196600.0 831470.0 True False 470119.92469984386 516104.3002162589 458357.1649843593 980038.630114451 727352.7868147086 724787.9185250639 881455.384819902 1121795.209440354 979327.6038312577 824103.8226738708 0.57046201190343 0.6262612622542111 0.5561886164988081 1.189217430074086 0.882598486747403 0.8794861746587117 1.06959264181053 1.361230440359565 1.1883546428091436 1.0 19.652466577647754 -5.193264982088119 0.5784666458345368 1.1726558519514803 0.4049240063105215 0.6352076655582002 0.16096844637485483 1.0302482697233832 0.529662919099113 0.10773431956087189 0.4694357899196298 6.4081846586267704e-06 5.193264982088119 -0.7677318456409588 DYEEVGADSADGEDEGEEY ddPTM_KYSE-520_SHP099_60min_R1 2 DYEEVGADSADGEDEGEEY 19 0 Q9BQE3;F5H5D3 Q9BQE3 TUBA1C Tubulin alpha-1C chain 0 ; 228.78 2.0645e-18 1069570000.0 612530.0 562430.0 1581920.0 347820.0 871370.0 548500.0 661280.0 444500.0 1457430.0 895380.0 False True 578551.7398517182 535410.0185753591 1683893.0943614913 380876.7082241042 939941.8615828996 545076.6080442558 728128.6358708667 442958.1332470802 1192797.4508204833 887447.6297950993 0.6519277537371965 0.6033144949623436 1.8974562980694212 0.4291821798116064 1.059151920660288 0.6142070695147467 0.820475047117972 0.49913720919999954 1.3440764398637084 1.0 19.759302459897363 DYEEVGVDSVEGEGEEEGEEY ddPTM_KYSE-520_SHP099_60min_R1 3 DYEEVGVDSVEGEGEEEGEEY 21 0 P68363;P68363-2;Q71U36-2;Q71U36 P68363;Q71U36-2 TUBA1B;TUBA1A Tubulin alpha-1B chain;Tubulin alpha-1A chain 0 ;; 156.8 9.355e-07 28402000.0 80586.0 100946.0 205780.0 65174.0 96477.0 64785.0 86941.0 65695.0 193110.0 119955.0 False True 76115.7339357918 96096.40263696492 219044.9080596411 71368.11736472248 104069.19102095932 64380.652784224454 95729.84474239203 65467.119378328214 158046.09190694825 118892.29202357767 0.6402074738427719 0.8082643626544598 1.8423810688770477 0.6002753933835289 0.875323280001375 0.5415040091199272 0.805181253662834 0.5506422516048841 1.3293216003910997 1.0 16.859295660337672 DYEHQFHLR ddPTM_KYSE-520_SHP099_60min_R1 4 DYEHQFHLR 9 0 Q15276-2;Q15276;A0A087WZZ3 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 0 ;;; 192.26 4.8589999999999996e-06 2105170000.0 1069582.0 953173.0 767852.0 660185.0 1134704.0 993159.0 820742.0 817966.0 874761.0 791829.0 False True 1010250.1543011451 907381.138338159 817348.9685266379 722928.7839081428 1223998.749217396 986960.326287374 903710.611030012 815128.6668606999 715926.4533302981 784814.0110936402 1.2872478574807285 1.1561734697800834 1.041455627668599 0.9211466330739175 1.5596035900426277 1.2575722557654678 1.151496530713932 1.038626547613257 0.9122243527898448 1.0 19.581991272307516 -7.334629623036799 2.6755444694434205 0.960175822810632 1.1972858046405117 0.2856552024628084 0.1582960361805015 0.41892043500473236 5.752389803513794 0.11461928221973369 0.047238344555937666 4.627755194456253e-08 7.334629623036799 0.23710998182987975 DYEIESQNPLAS(ph)PTNTLLGSAK ddPTM_KYSE-520_SHP099_60min_R1 7 DYEIESQNPLASPTNTLLGSAK 22 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 DYEIESQNPLAS(0.861)PT(0.136)NT(0.003)LLGSAK;DYEIESQNPLAS(0.961)PT(0.039)NTLLGSAK;DYEIESQNPLAS(0.939)PT(0.023)NT(0.038)LLGSAK;DYEIESQNPLAS(1)PTNTLLGSAK;DYEIESQNPLAS(0.999)PT(0.001)NTLLGSAK;DYEIESQNPLAS(0.97)PT(0.03)NTLLGSAK;DYEIESQNPLAS(0.975)PT(0.025)NTLLGSAK 289.04 1.0496e-44 3857590000.0 1943717.0 2564820.0 1665097.0 1432347.0 1577757.0 2389873.0 1766334.0 2335260.0 2644900.0 2651139.0 True False 1835895.1433062232 2441602.1973266895 1772431.8168693956 1568476.828229172 1701917.499690659 2374956.916128621 1944892.2784786068 2327159.5281137824 2164652.8325031702 2627651.9710149285 0.6986827645204133 0.9291954278037904 0.6745306594711609 0.5969119371707924 0.6476951736623229 0.9038323729041239 0.7401635756684298 0.8856422211861332 0.8237973888403017 1.0 21.325342774611283 -7.792575804794846 0.6443933618017084 0.9924824846179603 0.7264684968019106 0.39868543515841015 0.10063235281792819 0.805283871527644 0.7834312987489567 0.1057267409333571 0.0468605479614355 1.6122195946984208e-08 7.792575804794846 -0.2660139878160497 DYFEEYGK ddPTM_KYSE-520_SHP099_60min_R1 12 DYFEEYGK 8 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;;;;;;;;; 171.38 0.00090354 69022100000.0 29539500.0 30171800.0 20225400.0 18635420.0 29461400.0 32408300.0 26871100.0 26582000.0 23917100.0 27824800.0 False True 27900885.049466662 28722301.43920492 21529161.64578416 20406524.713856667 31779844.567564182 32206027.778451513 29587493.024663754 26489793.246285435 19574357.541026745 27578293.919366844 1.0116972837784313 1.0414821715651779 0.7806560372708666 0.7399487717957127 1.152349911872061 1.1678034860537492 1.0728543655083012 0.9605305289636858 0.7097740563015996 1.0 24.717029874138092 DYFEEYGKIDTIEIITDR ddPTM_KYSE-520_SHP099_60min_R1 20 DYFEEYGKIDTIEIITDR 18 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;;;;;;;;;;;;;;;;; 221.91 2.1010000000000002e-18 7459312000.0 7041736.0 6450659.0 5480817.0 7768075.0 4235860.9 3649262.8 3992572.4 4844290.0 5832842.0 2788707.900000001 False True 6651116.866727308 6140759.659003435 5834119.233437263 8506350.512443097 4569199.054078303 3626486.3972398946 4396180.581943617 4827486.28865578 4773744.926781153 2764002.1175879166 2.4063356624819052 2.221691372784598 2.1107506381104257 3.077548478821862 1.6531098239771762 1.3120418302735053 1.5905127401928572 1.7465566534618362 1.7271133391703386 1.0 21.398327290344273 -5.914175040057039 9.058071228257452 1.5240440524227825 2.411506140889576 0.687672607551943 0.3138789382826461 0.1793598247030981 17.166159629421212 0.09612897520125326 0.10909314406545591 1.218498390713917e-06 5.914175040057039 0.8874620884667936 DYFEQYGK ddPTM_KYSE-520_SHP099_60min_R1 8 DYFEQYGK 8 0 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8VZ49;A0A2R8Y4L2;Q32P51;F8VYN5 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 0 ;;;;;;; 140.5 0.0030811999999999997 30479080000.0 19272165.0 22828161.0 14250044.0 12951131.0 19360358.0 22158243.0 17864188.0 17526156.0 17159192.0 18635827.0 False True 18203099.589341525 21731461.879791778 15168624.637116566 14182002.59634049 20883908.029231407 22019945.186254095 19670074.46071362 17465361.855471577 14043515.280829417 18470728.07123402 0.9855106695924295 1.1765352072740416 0.8212250528846184 0.7678096143068277 1.1306488812293018 1.1921536119925646 1.0649322747243213 0.9455697570834697 0.7603119501661948 1.0 24.138737399186823 -7.52326818089321 24.990785311497838 0.8710842381630166 1.0184043033013985 0.13642733679579722 0.1419883875479723 29.086462078901572 1865744.6287473578 0.10071420569614481 0.03887331338851677 2.997311079858494e-08 7.52326818089321 0.14732006513838192 DYFGAHTYELLAK ddPTM_KYSE-520_SHP099_60min_R1 4 DYFGAHTYELLAK 13 0 P52209-2;P52209 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ;;; 137.59 0.00020576 1478175000.0 3942430.0 3849530.0 2592060.0 2915046.0 4475220.0 4744390.0 3146570.0 3419130.0 3279600.0 3195110.0 False True 3723735.5488606375 3664592.80053767 2759148.335042635 3192091.095399459 4827394.353481328 4714778.502167891 3464656.0031638583 3407269.8360609435 2684107.311988126 3166803.8111579614 1.175865563802966 1.1571897152661594 0.8712722667949977 1.0079851123559975 1.524374303350406 1.488812943055005 1.0940545135623623 1.0759333508617492 0.8475761278709165 1.0 21.59459606206548 -7.420241291003063 2.5735485764158152 0.9315845649026305 1.1940896355180117 0.23420863032889194 0.18961570948668802 0.501736076104407 6.241994869341836 0.1585435619849405 0.059389732071476097 3.7997822439618295e-08 7.420241291003063 0.2625050706153812 DYHFECYHCEDCR ddPTM_KYSE-520_SHP099_60min_R1 2 DYHFECYHCEDCR 13 0 Q96IF1;Q96IF1-2 Q96IF1 AJUBA LIM domain-containing protein ajuba 0 ; 137.8 1.5105e-05 764620000.0 265014.0 198359.0 150806.0 149789.0 181128.0 161213.0 144269.0 212204.0 184497.0 175802.0 False True 250313.14512768833 188829.5358970708 160527.19605813132 164024.90152429498 195381.7431226543 160206.80986807393 158853.11844975536 211467.913852786 150996.99559088727 174244.5310518865 1.4365624195869318 1.08370423310928 0.9212753771326663 0.9413489223110921 1.1213077503389393 0.9194366612308055 0.9116677435485887 1.213627266096605 0.8665809749054529 1.0 17.4107538499099 -4.289558122502871 3.1653511828900074 0.9927243276910076 1.4883746525612505 0.6402224841414246 0.10079946654016482 0.191470888308171 3.077184054524619 0.024841214454409146 0.2265627873405605 5.1338346576470826e-05 4.289558122502871 0.49565032487024285 DYHFKVDNDENEHQLSLR ddPTM_KYSE-520_SHP099_60min_R1 2 DYHFKVDNDENEHQLSLR 18 1 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 0 ; 263.92 2.7784e-29 1099210000.0 502230.0 675400.0 501940.0 368010.0 488110.0 407290.0 304990.0 330690.0 629130.0 319270.0 False True 474370.3007293168 642952.7702039321 534295.8555323952 402985.55975375895 526521.4800340032 404747.952033446 335821.365615557 329542.9135736265 514895.8510766829 316441.51618830167 1.4990773222279659 2.0318217974323467 1.6884505610017908 1.2734914325020437 1.663882433557458 1.2790608416646465 1.061243068421285 1.0414022709255657 1.6271437998365834 1.0 18.271579363974986 -5.73413506687669 0.8836502438910758 1.1845470655099803 1.7836641256282513 0.4464018286888236 0.24048610134054235 0.5643246318914106 0.947626544434117 0.12096132722337294 0.20467447938953284 1.8444417031101495e-06 5.73413506687669 0.5991170601182709 DYHFVSR ddPTM_KYSE-520_SHP099_60min_R1 1 DYHFVSR 7 0 Q8N3R9-2;Q8N3R9 Q8N3R9-2 MPP5 MAGUK p55 subfamily member 5 0 63.565 0.035970999999999996 0.0 250950.0 150810.0 127410.0 162620.0 179060.0 191140.0 168800.0 161140.0 153590.0 200220.0 False True 237029.30324357768 143564.86122957506 135623.05246320792 178075.355906514 193151.0032879648 189947.02436021683 185863.9513292437 160581.0429503586 125701.9276888207 198446.2065688027 1.1944259723674684 0.7234447244513093 0.6834247668835456 0.8973482486034523 0.9733166817728913 0.9571713546177606 0.936596141306452 0.8091917992631621 0.6334307410670456 1.0 17.5983884589631 -7.377365859511372 6.004212407974709 0.7872411127979724 0.8970939185886063 0.06195793842340369 0.15628590305572682 0.6413268510991007 29.21456167958277 0.08840654455270974 0.04149338276111666 4.194055184170161e-08 7.377365859511372 0.10985280579063395 DYHQQFR ddPTM_KYSE-520_SHP099_60min_R1 2 DYHQQFR 7 0 A0A6I8PIQ6;A0A0A0MS45;J3KNI1;Q9H9E3-3;Q9H9E3 A0A6I8PIQ6 COG4 Conserved oligomeric Golgi complex subunit 4 0 ; 137.18 0.0029919 267750000.0 328690.0 345890.0 244874.0 213440.0 331160.0 345740.0 257389.0 255495.0 258620.0 308042.0 False True 310456.9104727299 329272.9252085249 260658.96985225275 233725.27342692393 357220.40795734606 343582.1084142591 283408.39199456625 254608.74747798115 211661.127279659 305312.9875330493 1.0168480318549298 1.0784766408696649 0.8537434714402286 0.7655267969942608 1.1700137974598213 1.125343900992968 0.9282552775907971 0.8339270121957076 0.6932594941011059 1.0 18.219929435258923 -7.128071439219081 3.852183003206808 0.8234129072727626 0.997056311033022 0.21729987469975376 0.13290113680821075 0.3683026464405702 9.4992137073159 0.07141213289143675 0.03928707736606959 7.44609479383768e-08 7.128071439219081 0.17364340376025933 DYKDHGYR ddPTM_KYSE-520_SHP099_60min_R1 1 DYKDHGYR 8 1 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 0 100.02 0.0026891 365660000.0 386940.0 385630.0 279490.0 242490.0 383170.0 313220.0 251200.0 272520.0 293940.0 200920.0 False True 365475.66685423366 367103.7559575689 297506.3725998116 265536.17669272324 413323.2990609265 311265.0777969403 276593.7474757466 271574.6917266465 240567.90562440266 199140.00511339473 1.8352699481258108 1.8434455485151358 1.4939558348931692 1.3334145318592368 2.075541269699029 1.5630464487519675 1.388941148807584 1.3637374949950707 1.2080340436238213 1.0 17.603423546731456 -7.42582357234335 0.8022971314175883 1.0139784877599671 1.7053352186180077 0.5943305157537213 0.19717908988327812 0.46126268414946886 0.5712405456812875 0.1935924356015998 0.08176125063845056 3.7512536210771335e-08 7.42582357234335 0.6913567308580406 DYLHYHIK ddPTM_KYSE-520_SHP099_60min_R1 2 DYLHYHIK 8 0 O15144;H7C3F9 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 0 ; 127.56 0.00094115 2371800000.0 5050900.0 4074300.0 3157400.0 2448900.0 4175900.0 3732300.0 2945400.0 2699100.0 2849700.0 2410400.0 False True 4770716.508280475 3878564.512351024 3360931.056018617 2681642.719711368 4504519.572379161 3709005.331273612 3243149.7763338517 2689737.452074673 2332266.315091036 2389045.731262826 1.9969130125268557 1.623478555306203 1.4068090083156601 1.1224744192292535 1.8854890525674937 1.5525049532279438 1.357508453645027 1.1258626893897525 0.9762334326929033 1.0 21.188003039541453 -7.164806291338223 1.8379627471533673 0.9948210359868931 1.5826436713207972 0.5576172582284523 0.22639286884230186 0.3086727202234556 1.9646910539735674 0.16645512708363963 0.07250237154434937 6.842167608964259e-08 7.164806291338223 0.5878226353339041 DYLHYIR ddPTM_KYSE-520_SHP099_60min_R1 8 DYLHYIR 7 0 P62280;M0QZC5;M0R1H5 P62280 RPS11 40S ribosomal protein S11 0 ;;;;;;; 148.07 0.0023958 6321211000.0 5590790.0 4508560.0 3112507.0 2617639.0 4880330.0 4495693.0 3317617.0 2926099.0 3081989.0 3083192.0 False True 5280657.733736449 4291962.010113467 3313144.1814072826 2866418.6235381337 5264384.205720723 4467633.71239435 3652994.103181705 2915949.0455256384 2522377.488220201 3055877.3175670765 1.728033289615377 1.4044942136389476 1.084187562884569 0.9380018651469361 1.722707968496569 1.4619807171942483 1.1953994625968887 0.9542101146413687 0.8254184399746718 1.0 21.54315519486722 -7.132376798868872 2.8871437558552286 0.9098205021924026 1.3697106908451528 0.43663155053228886 0.23441722033271323 0.2931624912228387 4.659700152936061 0.1402383822629454 0.07239461856597984 7.372642936120192e-08 7.132376798868872 0.4598901886527502 DYLLS(ph)ES(ph)EDEGDNDGER ddPTM_KYSE-520_SHP099_60min_R1 3 DYLLSESEDEGDNDGER 17 0 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 2 DYLLS(1)ES(1)EDEGDNDGER;DYLLS(1)ES(1)EDEGDNDGER;DYLLS(1)ES(1)EDEGDNDGER 208.52 2.4149000000000003e-15 580090000.0 1628360.0 1381310.0 1382170.0 1313410.0 1284300.0 1418040.0 1356380.0 1386010.0 1692650.0 1446950.0 True False 1538031.6247448171 1314949.7942114195 1471266.8897501903 1438236.0915088842 1385367.10333259 1409189.4863647702 1493496.1273931258 1381202.254807166 1385307.4282341446 1434131.148710064 1.0724483783287233 0.9168964744919998 1.025894243405513 1.002862320369035 0.9659974993072741 0.9826085205891194 1.0413943862361947 0.963093407495887 0.9659558886787767 1.0 20.4517455312594 -4.21926207931899 23.517457236565182 0.9867487098568913 1.0724489753400341 0.3782905192245871 0.03357494926127262 16553.915334760313 9229802.444809068 0.00810757255312293 3.3197318849908206 6.035842805229316e-05 4.21926207931899 0.0857002654831428 DYLQAQHPPS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 5 DYLQAQHPPSPIK 13 0 Q9P219 Q9P219 CCDC88C Protein Daple 1 DYLQAQHPPS(1)PIK;DYLQAQHPPS(1)PIK;DYLQAQHPPS(1)PIK;DYLQAQHPPS(1)PIK;DYLQAQHPPS(1)PIK 158.64 7.959699999999999e-07 3575820000.0 2882370.0 2953090.0 2344260.0 2046190.0 2088050.0 2791060.0 2309340.0 2643380.0 3049750.0 2835470.0 True False 2722479.190237856 2811219.1237215386 2495374.750548619 2240659.2823905447 2252367.6556206606 2773639.959248863 2542790.6241864697 2634210.7317495323 2495992.2779411497 2810349.941762279 0.9687331637179241 1.0003092789073502 0.887923142049652 0.7972883551240243 0.8014545171581993 0.9869375760050736 0.904795017303777 0.9373248123319847 0.8881428753232041 1.0 21.42231835379581 -8.828870626202843 13.095890804304728 1.0000025674684365 0.9069046739012073 0.14786231287456586 0.066128707703223 0.0 0.0 0.07007684713156015 0.016996131919628503 1.4829597844370147e-09 8.828870626202843 -0.0930978935672292 DYNASAS(ph)TISPPSSMEEDKFSR ddPTM_KYSE-520_SHP099_60min_R1 1 DYNASASTISPPSSMEEDKFSR 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DYNAS(0.006)AS(0.317)T(0.317)IS(0.317)PPS(0.021)S(0.021)MEEDKFS(0.002)R 48.336999999999996 0.065825 504340000.0 485720.0 411690.0 420910.0 446710.0 405390.0 380350.0 449060.0 405920.0 566550.0 508840.0 True False 458776.14334118494 391911.79444071173 448042.5320798121 489165.1840917411 437291.88664642046 377976.0945663316 494455.36720325943 404511.9582624399 463678.801563262 504332.07347153017 0.9096707655002694 0.7770907603456939 0.8883879405006835 0.9699267800372303 0.867071339794743 0.7494587682368937 0.9804162638313181 0.8020746241221852 0.9193918569794014 1.0 18.944014452194722 -8.008367398725484 23.68027435442494 1.0000000078574398 0.8683159305934826 0.24361620967480002 0.07200199567393233 240.44446543801638 680477.2945241755 0.0676921284517181 0.017478032415698133 9.809177680260192e-09 8.008367398725484 -0.13168407726395726 DYNASASTIS(ph)PPSSMEEDKFSR ddPTM_KYSE-520_SHP099_60min_R1 5 DYNASASTISPPSSMEEDKFSR 22 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 DYNAS(0.008)AS(0.031)T(0.15)IS(0.753)PPS(0.022)S(0.026)MEEDKFS(0.009)R;DYNASAST(0.001)IS(0.996)PPS(0.002)SMEEDKFSR;DYNASAS(0.002)T(0.006)IS(0.992)PPSSMEEDKFSR;DYNASASTIS(0.998)PPS(0.001)SMEEDKFSR;DYNASAS(0.021)T(0.063)IS(0.915)PPS(0.001)SMEEDKFSR 177.85 3.2731000000000003e-10 20923700000.0 2133340.0 1670800.0 1568100.0 1867460.0 1729420.0 1690180.0 1788780.0 1998980.0 2023890.0 1840150.0 True False 2014999.3774921456 1590532.2600780702 1669182.2350487115 2044942.8369276782 1865515.5149462298 1679630.959679561 1969607.3392104523 1992046.0049454411 1656402.594115031 1823847.7026150383 1.1048068183560686 0.8720751506814743 0.9151982551259259 1.1212245594824792 1.0228461029237519 0.9209272009232465 1.0799187543929372 1.0922216817167572 0.9081912879787474 1.0 20.79855383399383 -5.2165593339849625 24.99682098562042 1.0229961092237922 0.9548315953958106 0.08171223469278133 0.08527617949106828 1000.9895944368945 557519.2840781334 0.02283733274134985 0.03955513599945456 6.073522797856492e-06 5.2165593339849625 -0.06816451382798161 DYNDLFDGDDMS(ph)NAGDFLNDNAVEIPSFSK ddPTM_KYSE-520_SHP099_60min_R1 3 DYNDLFDGDDMSNAGDFLNDNAVEIPSFSK 30 0 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 DYNDLFDGDDMS(1)NAGDFLNDNAVEIPSFSK;DYNDLFDGDDMS(1)NAGDFLNDNAVEIPSFSK;DYNDLFDGDDMS(1)NAGDFLNDNAVEIPSFSK 199.31 7.9001e-16 201327000.0 432060.0 319733.0 288777.0 380479.0 313203.0 348032.0 323683.0 424460.0 378050.0 377434.0 True False 408092.7705097438 304372.5467509826 307392.0274795366 416639.609764817 337850.2942187003 345859.8031920846 356404.03648165625 422987.6473297089 309405.64986495674 374090.22839920816 1.0908939596097924 0.8136340477361339 0.8217055783438028 1.113740959093437 0.903125151556125 0.9245357855832641 0.9527221226995585 1.130710227689562 0.8270882968233437 1.0 18.51302675621937 -5.2281233084131715 24.998092997236462 0.977785958042002 0.8992335178258969 0.07480537823162015 0.1114371826380885 1610.3341736612745 1208282.6388755115 0.02930811023661843 0.05075879967812873 5.913936970385276e-06 5.2281233084131715 -0.07855244021610508 DYNPYNYSDSIS(ph)PFNK ddPTM_KYSE-520_SHP099_60min_R1 3 DYNPYNYSDSISPFNK 16 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4X8;H7C5M8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 DYNPYNYSDSIS(1)PFNK;DYNPYNYSDSIS(1)PFNK;DYNPYNYSDSIS(1)PFNK 344.14 8.8484e-59 1952870000.0 1385830.0 1339750.0 1044120.0 1274820.0 1228510.0 1488370.0 1651270.0 1805870.0 2133510.0 1689520.0 True False 1308955.2473163845 1275386.398994252 1111425.645851069 1395978.5095113895 1325186.7477342668 1479080.5307471817 1818196.4864421843 1799605.858463225 1746118.365410354 1674552.1672266694 0.7816748100981692 0.7616283469427526 0.6637151517899681 0.833642890817404 0.7913678496675273 0.8832693060836555 1.0857807370990498 1.0746788865011383 1.042737514891644 1.0 20.67534389026393 -6.51714372966339 2.2063385119817673 1.0590858337369875 0.7605917544635543 0.8878687080578155 0.047379938188840606 0.09566957647324661 0.934388661302595 0.020965764532874822 0.01627166408061227 3.039878811957272e-07 6.51714372966339 -0.2984940792734332 DYNS(ph)LTR ddPTM_KYSE-520_SHP099_60min_R1 7 DYNSLTR 7 0 P16144-4;P16144-2;P16144-3;P16144;J3QRK0 P16144-4 ITGB4 Integrin beta-4 1 DY(0.002)NS(0.998)LTR;DY(0.003)NS(0.996)LT(0.001)R;DYNS(0.977)LT(0.023)R;DYNS(1)LTR;DYNS(1)LTR;DYNS(0.998)LT(0.002)R;DYNS(0.998)LT(0.002)R 131.52 0.0019878 8878400000.0 8992580.0 8393200.0 7245250.0 10244740.0 9169000.0 10285420.0 8970260.0 10440320.0 12463580.0 7751130.0 True False 8493743.66113621 7989978.0735499505 7712290.407809875 11218397.009406611 9890548.135526363 10221224.878597159 9877061.42210109 10404104.966709008 10200508.053283626 7682461.018487894 1.1056019211416706 1.0400284562879023 1.0038827908466046 1.460260843811568 1.2874192412723855 1.3304623159166982 1.2856637213429232 1.3542671992310094 1.3277656767455162 1.0 22.873137110793973 -5.2461117158041874 24.906872777746 1.3081387304226126 1.0488567724880384 0.48853929895361203 0.11285258987825111 569.9909024452382 926212.1967451654 0.02830363493800306 0.04879480600448236 5.673986317650493e-06 5.2461117158041874 -0.2592819579345742 DYPDFS(ph)PSVDAEAIQK ddPTM_KYSE-520_SHP099_60min_R1 3 DYPDFSPSVDAEAIQK 16 0 P12429;D6RFG5;D6RAZ8;D6RCA8 P12429 ANXA3 Annexin A3;Annexin 1 DYPDFS(1)PSVDAEAIQK;DY(0.001)PDFS(0.5)PS(0.5)VDAEAIQK;DYPDFS(0.999)PS(0.001)VDAEAIQK 265.77 1.1734999999999999e-23 191523000.0 578070.0 623560.0 487405.0 468785.0 508203.0 601570.0 492542.0 530820.0 701380.0 573845.0 True False 546003.3047460242 593603.2416173583 518823.90617557324 513338.1854546504 548195.684820471 597815.3784889388 542332.9521066847 528978.7093143191 574027.072350967 568761.1797446546 0.959986940373027 1.043677491990323 0.9121999261772741 0.9025548925211697 0.9638415988000157 1.0510833013556378 0.9535336999444392 0.9300541741470544 1.0092585302827393 1.0 19.1174634729716 -6.014934407754646 24.894219690767393 0.9850167701440309 0.9548457280098537 0.10756694195016903 0.046539797563258975 1920.4018947066104 3201122.528056611 0.016118413228381465 0.01669765536434739 9.661967943404723e-07 6.014934407754646 -0.030171042134177206 DYPFHEEF ddPTM_KYSE-520_SHP099_60min_R1 1 DYPFHEEF 8 0 P15121 P15121 AKR1B1 Aldose reductase 0 85.265 0.039466 150770000.0 371490.0 362040.0 243340.0 190140.0 325470.0 323810.0 271750.0 229780.0 238110.0 272260.0 False True 350882.70915304526 344647.05496688094 259026.0857577663 208210.84843232454 351082.6373290178 321788.98167877947 299221.1420244193 228982.94681105542 194875.2262646339 269847.98821507493 1.3002976656375287 1.2771896401621103 0.9598963011401689 0.7715856983390804 1.3010385574903638 1.192482418739792 1.108850742240603 0.8485627346183913 0.722166681892451 1.0 18.04178740613145 -7.258240480475106 5.534589527057118 0.836555511488717 1.1253465999349785 0.3563370847813926 0.16775296299335224 0.19312484950234093 22.62204521278354 0.09361724563495591 0.04858010359144413 5.517718238521462e-08 7.258240480475106 0.28879108844626156 DYPVVSIEDPFDQDDWGAWQK ddPTM_KYSE-520_SHP099_60min_R1 5 DYPVVSIEDPFDQDDWGAWQK 21 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ;;;; 280.65 1.1444999999999999e-36 973140000.0 880054.0 1203157.0 2475720.0 735962.0 1328430.0 1157567.0 1041834.0 877906.0 1782130.0 1282420.0 False True 831235.6502758448 1145355.5317445232 2635308.872492056 805907.6072049567 1432969.883267236 1150342.194975322 1147152.7480399972 874860.7489907999 1458540.115841383 1271058.756507662 0.6539710662626903 0.9011035295421601 2.0733179005294633 0.6340443375090338 1.1273828813425102 0.9050267653526747 0.9025174817188573 0.688292924706763 1.1475001516443202 1.0 20.277599291848745 DYS(ph)YER ddPTM_KYSE-520_SHP099_60min_R1 2 DYSYER 6 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 DY(0.001)S(0.996)Y(0.002)ER;DYS(1)YER 81.296 0.023065000000000002 898760000.0 1319190.0 1282720.0 1195490.0 1229220.0 1328130.0 1182800.0 1159320.0 1290880.0 1478270.0 1301900.0 True False 1246011.900959933 1221096.2057980257 1272553.198251631 1346044.699221532 1432646.274974003 1175417.7064626182 1276515.3794728618 1286402.238573657 1209853.4321541304 1290366.1788628744 0.9656265960550606 0.9463175847294042 0.9861954064644342 1.043149395319493 1.110263348839871 0.9109179438494321 0.9892659931600047 0.9969280500728015 0.937604729550727 1.0 20.299349099673815 -4.91147547492353 5.414181836221 0.9999286670019638 0.956780628927484 0.09526746890829585 0.0511637536413159 0.4958465507247266 23.397281177598465 0.014200795528025677 0.030517752028466724 1.226096139690616e-05 4.91147547492353 -0.043148038074479866 DYSTVSAS(ph)PTALSTLK ddPTM_KYSE-520_SHP099_60min_R1 1 DYSTVSASPTALSTLK 16 0 A0A2R8YFR7;A0A2R8YF49;Q12774 A0A2R8YFR7;Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 DYSTVSAS(0.999)PT(0.001)ALSTLK 297.49 9.6859e-30 0.0 187670.0 218140.0 137190.0 131330.0 120850.0 191970.0 154410.0 165650.0 218140.0 209380.0 True False 177259.5709891299 207660.22696518438 146033.48691176105 143811.56371419583 130360.20745755939 190771.84402234436 170019.2696963776 165075.3988130005 178531.27486190075 207525.05609517498 0.8541598509812485 1.0006513472279097 0.7036908682717681 0.692984097535871 0.6281661111696011 0.919271376728855 0.819271045605228 0.7954480385120039 0.8602878043797414 1.0 17.66292600907437 -8.456623904543122 0.9202908846311411 1.000999672389361 0.7960878852076632 0.24878589375278037 0.10407845544392985 2.471505644704177 3.3615768551579173 0.11174163587016485 0.03638387879761108 3.4944279908149415e-09 8.456623904543122 -0.2049117871816979 DYTGCSTSESLS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 5 DYTGCSTSESLSPVK 15 0 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 DYTGCSTSESLS(1)PVK;DYTGCSTSESLS(1)PVK;DYTGCSTSESLS(1)PVK;DYTGCSTSESLS(1)PVK;DYTGCSTSES(0.001)LS(0.999)PVK 340.12 2.339e-54 2788900000.0 1618680.0 2036340.0 1481003.0 1684380.0 1585000.0 2274450.0 1822410.0 2438280.0 2673480.0 2019020.0 True False 1528888.5936414178 1938511.1697913436 1576470.8230685815 1844462.968772688 1709730.4825836292 2260254.3138856087 2006636.987807624 2429822.1757788314 2188043.4249463384 2001133.0535737886 0.7640114638609373 0.9687067865524436 0.7877891079022405 0.921709311371722 0.8543812114493093 1.1294872721476765 1.0027504089365802 1.2142231979225242 1.0934022707979112 1.0 20.9323856632792 -6.257971772362286 24.94631220457905 1.0960351952714917 0.8648888160018205 0.6730609416394766 0.07953423666218509 167.98094407705852 1208474.1715132024 0.02525803871408675 0.02430116431734997 5.521133235690791e-07 6.257971772362286 -0.2311463792696712 DYTYEELLNR ddPTM_KYSE-520_SHP099_60min_R1 1 DYTYEELLNR 10 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 95.50200000000001 0.022358000000000003 0.0 160530.0 198500.0 191620.0 152580.0 148500.0 163150.0 155080.0 156090.0 182700.0 163160.0 False True 151625.08089137892 188963.76204542574 203972.13180284007 167081.15732515045 160186.10515057947 162131.72033258024 170756.99983494743 155548.56022168 149526.28549220366 161714.52933655938 0.9376095117329727 1.1685020685565946 1.2613098689378393 1.0331858121258979 0.9905486279294116 1.002579799092465 1.0559162527664345 0.9618712731615673 0.9246311145055519 1.0 17.30308977885215 -5.506430124513391 23.476265184704417 0.9932155612874826 1.130438534300635 0.3495493113807161 0.08094298509272091 352.6311651220398 503291.9180321934 0.023531370206801218 0.03382122908243476 3.1158021703118774e-06 5.506430124513391 0.13722297301315234 DYVDLFR ddPTM_KYSE-520_SHP099_60min_R1 1 DYVDLFR 7 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 105.39 0.030008 171240000.0 354570.0 403250.0 227070.0 279170.0 429730.0 476160.0 346270.0 308070.0 284970.0 347020.0 False True 334901.2952822288 383877.2647094104 241707.2955248455 305702.23286447866 463547.30617076525 473188.10881741584 381274.35086953314 307001.37707407854 233226.6315091037 343945.67277747503 0.9737040520899423 1.1160985443121716 0.7027484706319437 0.8888096494886302 1.3477340837797653 1.375764099592431 1.1085307391444024 0.8925868280154273 0.6780914835349476 1.0 18.391821179468305 -7.3801329892500975 4.576300218062524 0.8248515482634724 1.0752235822672278 0.19658700092637493 0.2010754275935269 0.398003152575391 13.044679485309578 0.13123209536899605 0.059466665007832334 4.167417496605344e-08 7.3801329892500975 0.2503720340037554 DYYFALAHTVR ddPTM_KYSE-520_SHP099_60min_R1 1 DYYFALAHTVR 11 0 E9PK47;P06737-2;P06737 E9PK47 PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form 0 71.085 0.021327000000000002 0.0 189120.0 158000.0 122850.0 108590.0 201940.0 170160.0 132900.0 122790.0 125090.0 134720.0 False True 178629.13659862656 150409.44283716488 130769.10756694987 118910.36095122597 217831.5291185725 169097.968322353 146334.82897900773 122364.07014940145 102376.80926228646 133526.48561057402 1.3377805592786518 1.1264390143228176 0.979349579740562 0.890537636840263 1.6313731925355364 1.2664002017960851 1.0959236162763157 0.9164029861931107 0.7667153733145149 1.0 17.026766410126022 -7.182213563175263 3.05958499773965 0.873949952567697 1.1953018192403613 0.32987059757407533 0.19723463636684432 0.33769368514055614 6.116549545697331 0.11850706031321244 0.05968510096340382 6.57334515337377e-08 7.182213563175263 0.32135186667266424 EAAEMGK ddPTM_KYSE-520_SHP099_60min_R1 1 EAAEMGK 7 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A0A2U3TZH3;Q05639;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8Y488;A0A2R8YDN5 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 94.662 0.048514 322840000.0 496340.0 465310.0 369460.0 337110.0 543160.0 719260.0 638500.0 329070.0 500020.0 709250.0 False True 468807.0307707401 442955.8091554513 393275.9827569014 369148.8330441831 585903.6018423487 714770.8315440504 703045.8111594921 327928.53297551547 409228.9724784436 702966.5967881494 0.6668980189282349 0.6301235523555657 0.5594518780177853 0.5251299773429094 0.8334728912004341 1.0167920279709368 1.0001126858256204 0.4664923404238824 0.5821456870756143 1.0 19.423096612108708 -5.76900082562914 24.967262188060833 0.809022225756989 0.5953132603023603 0.28184223301248346 0.17265624560679182 262.1787042234277 865690.4035129688 0.058919845639398366 0.06809407994789536 1.70215527245623e-06 5.76900082562914 -0.2137089654546287 EAAENSLVAYK ddPTM_KYSE-520_SHP099_60min_R1 1 EAAENSLVAYK 11 0 P62258;P62258-2;K7EM20 P62258 YWHAE 14-3-3 protein epsilon 0 122.51 0.0015878 352440000.0 491850.0 607110.0 514390.0 359550.0 513410.0 566900.0 475810.0 485710.0 509600.0 575290.0 False True 464566.1000213331 577943.5243093112 547548.4024530995 393721.52389735077 553812.4460966944 563361.7668191215 523909.51825810166 484025.18537556595 417069.48597059096 570193.378168847 0.8147518329891315 1.0135921363474152 0.9602854459859375 0.6905052548343714 0.9712712691880793 0.9880187816777795 0.9188277842521005 0.848879001243391 0.7314526999769672 1.0 19.121091759348527 -7.286815341688674 7.611258079873747 0.8422919333465452 0.9113740972960256 0.03155686190284224 0.1084766399943341 0.6792226144490551 166.71028510524457 0.05833816004811811 0.028645909343138477 5.1663599179731795e-08 7.286815341688674 0.06908216394948041 EAAEPLSEPKEDQEAAELLS(ph)EPEEESER ddPTM_KYSE-520_SHP099_60min_R1 2 EAAEPLSEPKEDQEAAELLSEPEEESER 28 1 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 EAAEPLSEPKEDQEAAELLS(1)EPEEESER;EAAEPLSEPKEDQEAAELLS(1)EPEEESER 234.62 5.4674999999999995e-31 1529270000.0 1342500.0 1428390.0 1055500.0 1042800.0 1016640.0 1187490.0 1038310.0 1134010.0 1496020.0 1091470.0 True False 1268028.8487926002 1359768.0003428985 1123539.2188597117 1141907.3984707482 1096643.7841096648 1180078.4344329513 1143272.5077290696 1130076.3839899246 1224380.4795952172 1081800.4249508115 1.1721467467996756 1.256949035127922 1.0385827116963815 1.055561979949 1.0137209773785476 1.0908467099988506 1.0568238663624605 1.0446255685666865 1.1317988525017344 1.0 20.04500293864509 -4.767031359059937 24.99999994439911 1.0556235970047882 1.2145479068473888 0.7216286349321757 0.03987690677892682 57.94508751447343 259058.75499951933 0.00984288279797305 0.02144929807893971 1.7098918446364573e-05 4.767031359059937 0.15892430984260053 EAAFS(ph)PGQQDWSR ddPTM_KYSE-520_SHP099_60min_R1 4 EAAFSPGQQDWSR 13 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EAAFS(1)PGQQDWSR;EAAFS(1)PGQQDWSR;EAAFS(1)PGQQDWSR;EAAFS(1)PGQQDWSR 148.7 3.5017e-05 2101830000.0 3211860.0 2992720.0 3022730.0 2667370.0 2853320.0 3155070.0 3069460.0 3316580.0 4054430.0 3431160.0 True False 3033691.7231158293 2848945.2390356944 3217580.0123390043 2920876.042825964 3077860.0508299777 3135378.03781621 3379750.971842776 3305075.558075591 3318247.7158629214 3400762.5918020885 0.8920621893539044 0.837737172804532 0.9461348522520607 0.8588885474884533 0.9050499609262632 0.9219632224179315 0.9938214975635279 0.9718630656673413 0.9757363609744243 1.0 21.697426863936588 -6.535413862245599 2.1668926013977496 0.9839751126611904 0.885858360415277 0.7275082796871859 0.028000442933729136 0.16465160497054096 1.5561769269420573 0.01188360413359984 0.009088958418337692 2.9146481673326455e-07 6.535413862245599 -0.09811675224591343 EAAGPAPS(ph)PMR ddPTM_KYSE-520_SHP099_60min_R1 6 EAAGPAPSPMR 11 0 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR;EAAGPAPS(1)PMR 152.4 4.7527e-05 5997480000.0 6034670.0 7075250.0 5458390.0 4569990.0 5008730.0 6318510.0 4661450.0 5271240.0 6338740.0 6409070.0 True False 5699914.825283595 6735344.36983324 5810246.553132787 5004320.475582401 5402888.555224664 6279073.8353577275 5132674.857367917 5252955.298756665 5187784.6026319135 6352290.625981013 0.8973006999980155 1.0603016716970612 0.9146695098251246 0.7877977835451383 0.850541776713856 0.9884739545253444 0.8080037831353559 0.8269387545450074 0.8166793536513831 1.0 22.598845488585585 -4.9959891728251185 24.90434431025525 0.8619896813813288 0.980972323741282 0.24106154283311454 0.07756981898346227 137.28457959201953 852408.042233663 0.01969973718602121 0.04072322300394994 1.0092780475608063e-05 4.9959891728251185 0.11898264235995315 EAALILGVS(ph)PTANK ddPTM_KYSE-520_SHP099_60min_R1 1 EAALILGVSPTANK 14 0 Q96DA6-2;Q96DA6 Q96DA6-2 DNAJC19 Mitochondrial import inner membrane translocase subunit TIM14 1 EAALILGVS(0.974)PT(0.026)ANK 107.69 0.00040243 236960000.0 682140.0 837050.0 605380.0 546090.0 553540.0 692070.0 581870.0 683330.0 1107700.0 811720.0 True False 644300.334387623 796836.8615623345 644403.7634422471 597990.2294120551 597100.4487882281 687750.5344196688 640691.0981039514 680959.6877204214 906569.6028446296 804528.7923086046 0.800841859915039 0.9904392101068279 0.8009704184646059 0.7432800853479902 0.7421741204250025 0.8548488767520188 0.7963557106085427 0.8464081015253658 1.1268330127045145 1.0 19.617784527178628 -7.703332770249295 6.7745790244886095 1.0623813639619648 0.8207519447560782 0.6425844065194242 0.07211954524300151 0.11982308169501905 10.823811212116533 0.053014009287278153 0.0192427690537936 1.9800092982946234e-08 7.703332770249295 -0.24162941920588665 EAALPPVS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 12 EAALPPVSPLK 11 0 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK;EAALPPVS(1)PLK 177.81 5.9137e-06 266428100000.0 133239000.0 159879600.0 112746000.0 101293800.0 110487300.0 172785100.0 136016200.0 186682000.0 201341300.0 197730400.0 True False 125847967.06463842 152198744.03182793 120013787.55997828 110920732.29690851 119182021.9232568 171706684.09952128 149766044.8861891 186034443.71390644 164782795.3211351 195978662.4879233 0.6421513723331665 0.77660874964491 0.6123819095222871 0.5659837192926231 0.6081377452537778 0.8761498926450847 0.764195667961649 0.9492586659803863 0.8408200833153938 1.0 27.54612134609958 -6.2666268605116695 24.53786851312831 0.8752954697463861 0.6428202669959711 0.7119537467113439 0.07777355517748868 202.95552044299248 960018.2602450573 0.02766984841867549 0.025144534866541883 5.412191308270012e-07 6.2666268605116695 -0.232475202750415 EAALPPVS(ph)PLKAALSEEELEK ddPTM_KYSE-520_SHP099_60min_R1 8 EAALPPVSPLKAALSEEELEK 21 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(0.999)PLKAALS(0.001)EEELEK;EAALPPVS(0.998)PLKAALS(0.002)EEELEK;EAALPPVS(0.999)PLKAALS(0.001)EEELEK;EAALPPVS(1)PLKAALSEEELEK;EAALPPVS(1)PLKAALSEEELEK;EAALPPVS(1)PLKAALSEEELEK;EAALPPVS(1)PLKAALSEEELEK;EAALPPVS(1)PLKAALSEEELEK 220.99 2.4251e-19 1782183000.0 2424390.0 4029350.0 3274570.0 1801251.0 2080740.0 2895150.0 1958698.0 2401840.0 5287980.0 2886910.0 True False 2289904.253798356 3835773.9778223443 3485654.0216972437 1972441.3534741404 2244482.400208869 2877080.294948638 2156702.308890328 2393508.577633668 4327816.131127872 2861334.223381996 0.8002924772247577 1.3405543282841648 1.2181918467313209 0.6893432222478311 0.7844181158103124 1.005503052190817 0.7537400878465648 0.8365008736395099 1.5125168167221463 1.0 21.44825659346327 -5.230437699348819 24.8739190150617 0.9219261264232066 1.141767044557981 0.09157951895428984 0.25148108394854757 1333.9170832180082 1070254.6073839234 0.06783907031152586 0.11748361377556617 5.882504941244607e-06 5.230437699348819 0.21984091813477447 EAALPPVS(ph)PLKAALSEEELEKK ddPTM_KYSE-520_SHP099_60min_R1 8 EAALPPVSPLKAALSEEELEKK 22 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 EAALPPVS(0.998)PLKAALS(0.002)EEELEKK;EAALPPVS(0.997)PLKAALS(0.003)EEELEKK;EAALPPVS(1)PLKAALSEEELEKK;EAALPPVS(1)PLKAALSEEELEKK;EAALPPVS(1)PLKAALSEEELEKK;EAALPPVS(1)PLKAALSEEELEKK;EAALPPVS(1)PLKAALSEEELEKK;EAALPPVS(1)PLKAALSEEELEKK 176.61 3.8356e-10 9840780000.0 9172180.0 13211950.0 12197300.0 5570780.0 6998370.0 9365270.0 5621570.0 6797430.0 18880330.0 9904980.0 True False 8663380.891112482 12577228.090458758 12983557.474370034 6100225.256283916 7549101.903721626 9306817.876059486 6189853.156836116 6773851.301862085 15452138.006387597 9817229.58315782 0.8824669747945132 1.281138225802106 1.3225276402463157 0.6213795047382106 0.768964588204463 0.9480085799384804 0.6305091578438039 0.6899962198585154 1.5739815266108146 1.0 23.226884523544065 -5.2505467147447105 24.98120059063158 0.8639998820299387 1.1739536704480955 0.1574417702804588 0.2829922786726513 1197.2481870552365 2745759.877660043 0.07640119958699894 0.13070178683619638 5.616338631425846e-06 5.2505467147447105 0.3099537884181568 EAARS(ph)PDKPGGS(ph)PSASR ddPTM_KYSE-520_SHP099_60min_R1 6 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(1)PDKPGGS(0.969)PS(0.03)ASR;EAARS(1)PDKPGGS(0.903)PS(0.093)AS(0.005)R;EAARS(0.963)PDKPGGS(0.679)PS(0.338)AS(0.02)R;EAARS(0.999)PDKPGGS(0.591)PS(0.339)AS(0.071)R;EAARS(0.978)PDKPGGS(0.868)PS(0.143)AS(0.01)R;EAARS(1)PDKPGGS(0.837)PS(0.132)AS(0.031)R 114.15 8.222e-05 56302300000.0 18843350.0 17260140.0 16131150.0 16313670.0 16833660.0 16208310.0 16134050.0 15694450.0 18978530.0 15829050.0 True False 17798071.812213056 16430936.966401689 17170989.73975256 17864116.29191625 18158373.271576457 16107147.925122665 17765037.227153935 15640009.616062162 15532507.361808147 15688816.931814564 1.1344432081504654 1.047302485446319 1.0944732043454706 1.1386528614334523 1.1574087039510292 1.0266642790929499 1.1323375946295293 0.996889037843674 0.9900368797286783 1.0 23.90323322933104 -7.272404757804137 24.30728177084645 0.9950971952678097 1.102244174314742 0.6210299089292601 0.0389297617275664 349.72346209521845 775236.6508854458 0.021122837290818954 0.01030968428110959 5.340663832315653e-08 7.272404757804137 0.10714697904693227 EAARS(ph)PDKPGGS(ph)PSASRR ddPTM_KYSE-520_SHP099_60min_R1 4 EAARSPDKPGGSPSASRR 18 3 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(0.994)PDKPGGS(0.644)PS(0.126)AS(0.236)RR;EAARS(1)PDKPGGS(0.88)PS(0.024)AS(0.096)RR;EAARS(1)PDKPGGS(0.927)PS(0.042)AS(0.03)RR;EAARS(1)PDKPGGS(0.444)PS(0.321)AS(0.235)RR 87.339 0.0034396 8603320000.0 3074840.0 3253350.0 3027880.0 2300730.0 2615080.0 2503320.0 2041000.0 2152000.0 3611550.0 2279400.0 True False 2904272.495658427 3097054.182622094 3223061.9895792957 2519390.687460304 2820871.9182301527 2487695.8513205955 2247324.198240444 2144535.2142805774 2955783.559766656 2259206.289346367 1.2855278021108423 1.370859401917712 1.4266346569492736 1.1151662862045295 1.2486119269109712 1.1011370953824384 0.9947405904622544 0.9492427603417454 1.308328315880274 1.0 21.107384579333168 -5.704340211113142 1.1623527798371465 1.0632468266828243 1.3606289528960358 0.5147465973760478 0.11231506638069942 0.38159936141727463 1.0858831917310723 0.046046221274853034 0.07231655628358812 1.9754215576514195e-06 5.704340211113142 0.2973821262132115 EAARS(ph)PDKPGGSPS(ph)ASR ddPTM_KYSE-520_SHP099_60min_R1 2 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(0.974)PDKPGGS(0.072)PS(0.708)AS(0.246)R;EAARS(1)PDKPGGS(0.194)PS(0.695)AS(0.111)R 81.949 0.0041983 8005600000.0 5732100.0 5108200.0 4655300.0 4816600.0 5412700.0 5238600.0 4914000.0 4997000.0 6062000.0 4668700.0 True False 5414128.986341938 4862794.4044354865 4955388.086743357 5274368.2158364095 5838648.695949774 5205903.954239991 5410755.076018387 4979666.573308571 4961293.61058423 4627338.950193635 1.1700307767848688 1.0508835546252773 1.070893690754163 1.1398275061773244 1.2617724266136698 1.1250319050049586 1.1693016513933931 1.0761404398742376 1.0721699153628286 1.0 22.141751348766277 -7.837349594127188 1.5091572439068899 1.00485195033448 1.1382892483096496 0.384836753216971 0.05592537191475684 0.4308244432823168 2.075862164825928 0.05727494321939967 0.017270518322423337 1.4542879507826862e-08 7.837349594127188 0.13343729797516968 EAARS(ph)PDKPGGSPSAS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(1)PDKPGGS(0.029)PS(0.026)AS(0.945)R;EAARS(1)PDKPGGS(0.005)PS(0.122)AS(0.872)R;EAARS(0.978)PDKPGGS(0.316)PS(0.202)AS(0.503)R 224.59 1.1764000000000001e-15 5478900000.0 4560940.0 4297720.0 3917930.0 3906240.0 4085470.0 4088300.0 4007910.0 3921970.0 4885190.0 4122280.0 True False 4307935.56619152 4091251.080190767 4170486.036709639 4277487.875146118 4406973.24585548 4062783.403222118 4413068.656232171 3908365.601464684 3998162.6416182695 4085759.806285314 1.0543780766467041 1.001344003114673 1.0207369582259795 1.0469259276000171 1.078617798108452 0.9943764674986889 1.0801096651455973 0.9565823217146207 0.9785603733894759 1.0 21.962172962708426 -7.2754785918692715 24.996230745890962 0.9756785076480319 1.0373641487865002 0.4842769277982554 0.028803308654602754 688.9882986339501 1226708.4368514451 0.0151793285552069 0.007355319855441669 5.3029973260259106e-08 7.2754785918692715 0.061685641138468306 EAARS(ph)PDKPGGSPSAS(ph)RR ddPTM_KYSE-520_SHP099_60min_R1 1 EAARSPDKPGGSPSASRR 18 3 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 EAARS(0.999)PDKPGGS(0.197)PS(0.143)AS(0.661)RR 86.32 0.0035866999999999995 2260400000.0 608620.0 688520.0 643230.0 513570.0 584490.0 492530.0 458220.0 396880.0 757960.0 466990.0 True False 574858.6353461087 655442.4657104095 684693.6350043882 562379.5383895485 630486.0377068165 489455.93757527333 504541.34939624404 395503.31591248827 620333.5706166979 462852.8319127219 1.2419901007638368 1.4160925903851946 1.479290149689519 1.2150288377096803 1.3621738795490494 1.0574763808889645 1.0900686235649588 0.8544904311767645 1.3402393327771005 1.0 18.82019402338582 -6.262845260351968 24.740609061837528 1.060711448346814 1.3474521316061143 0.5161070735549603 0.13273613410176666 86.26582941034364 1518089.8211560156 0.04388279685626078 0.040827585653951566 5.459523499220726e-07 6.262845260351968 0.28674068325930024 EAARS(ph)PDKPGGSPSASR ddPTM_KYSE-520_SHP099_60min_R1 4 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 EAARS(0.998)PDKPGGS(0.001)PSAS(0.001)R;EAARS(0.988)PDKPGGS(0.005)PS(0.004)AS(0.003)R;EAARS(0.942)PDKPGGS(0.01)PS(0.01)AS(0.038)R;EAARS(0.518)PDKPGGS(0.369)PS(0.056)AS(0.056)R 138.39 0.0001802 15740780000.0 1613470.0 1539050.0 1523140.0 1398080.0 1499830.0 1462420.0 1447810.0 1404940.0 1746830.0 1357140.0 True False 1523967.6027272947 1465111.7278388534 1621324.041510166 1530953.1028519205 1617858.088134638 1453292.4943228438 1594168.7640639371 1400066.5910554617 1429649.7060007977 1345116.7954389441 1.1329630318309922 1.0892078166050645 1.20534071614286 1.1381562612578437 1.2027640228867202 1.0804210454071383 1.1851526718493774 1.040851319233276 1.062844290435217 1.0 20.359300015626506 -7.275462341829941 24.279808827553296 1.038885824974234 1.1468425587685969 0.596990210396573 0.042554157494853445 395.2268530908514 684303.0287691307 0.022193336624694516 0.010754280357541094 5.303195752510509e-08 7.275462341829941 0.10795673379436277 EAARS(ph)PDKPGGSPSASRR ddPTM_KYSE-520_SHP099_60min_R1 3 EAARSPDKPGGSPSASRR 18 3 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 EAARS(0.981)PDKPGGS(0.013)PS(0.005)AS(0.002)RR;EAARS(0.412)PDKPGGS(0.288)PS(0.096)AS(0.203)RR;EAARS(0.998)PDKPGGS(0.002)PSASRR 73.459 0.016427 2732230000.0 658790.0 786330.0 765280.0 475140.0 533526.0 471815.0 337916.0 355661.0 877840.0 405605.0 True False 622245.6054346939 748553.5264946073 814611.1732912923 520297.1627439498 575511.4608523108 468870.2275741121 372075.8470223507 354427.29500290105 718446.3845455725 402011.65525591525 1.54782976388727 1.862019463137426 2.026337203513967 1.2942340251621203 1.4315790433636753 1.1663100346571684 0.9255349743168322 0.8816343764393532 1.7871282465385714 1.0 18.61687780354289 -5.529285604483389 2.0441774151870526 1.1612316084658927 1.812401274948927 0.4819963221344078 0.2785156033510594 0.27248730155173667 2.286523077559562 0.09005300557882721 0.13940519480757366 2.9560678323712767e-06 5.529285604483389 0.6511696664830344 EAARSPDKPGGS(ph)PSASR ddPTM_KYSE-520_SHP099_60min_R1 3 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 EAARS(0.198)PDKPGGS(0.779)PS(0.012)AS(0.012)R;EAARS(0.002)PDKPGGS(0.59)PS(0.059)AS(0.349)R;EAARS(0.003)PDKPGGS(0.641)PS(0.102)AS(0.255)R 132.59 9.324e-05 35435470000.0 1639060.0 1362470.0 1358340.0 1416800.0 1467820.0 1295700.0 1349780.0 1408630.0 1749850.0 1361500.0 True False 1548138.0744148954 1297014.8960908363 1445900.7698208431 1551452.246023546 1583329.0832466257 1287613.0556844885 1486228.9349833333 1403743.7913067138 1432121.3501288034 1349438.169230972 1.1472463946215188 0.9611517783211875 1.071483527581589 1.1497023586547128 1.1733246615878261 0.9541845525373595 1.1013686798486786 1.0402431347459884 1.0612723004159217 1.0 20.363927443878147 -6.258472459003745 24.99673346672264 1.0383011162294329 1.0939479855461078 0.20936332909701272 0.06590975134580138 571.4769145892302 4814795.657152409 0.02314063259831589 0.022172876932902343 5.514771734666363e-07 6.258472459003745 0.05564686931667495 EAARSPDKPGGSPS(ph)ASR ddPTM_KYSE-520_SHP099_60min_R1 1 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 EAARS(0.002)PDKPGGS(0.023)PS(0.945)AS(0.03)R 90.882 0.0012462 11730000000.0 900970.0 795280.0 779970.0 798830.0 981160.0 920750.0 857900.0 917390.0 913450.0 700340.0 True False 850991.3980608329 757073.5550603832 830248.1141961245 874750.5630230028 1058371.70996325 915003.2577151294 944624.9042971467 914207.7882104351 747590.5062006202 694135.5324562759 1.2259729667627084 1.090671086064985 1.1960893447684475 1.2602013902495388 1.5247335145314975 1.318191066343036 1.3608652203042917 1.317045080483647 1.077009418542785 1.0 19.404857856133926 -7.868639413742936 4.177106158278567 1.0048813902355596 1.2876894476090548 0.4649736274421141 0.10766163186165935 0.20704089334674375 5.991600540471646 0.11652212540298497 0.0308426826831452 1.3531956288977919e-08 7.868639413742936 0.28280805737349524 EAARSPDKPGGSPSAS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 5 EAARSPDKPGGSPSASR 17 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 EAARS(0.004)PDKPGGS(0.023)PS(0.05)AS(0.923)R;EAARS(0.012)PDKPGGS(0.025)PS(0.411)AS(0.552)R;EAARSPDKPGGS(0.001)PS(0.002)AS(0.997)R;EAARS(0.001)PDKPGGS(0.062)PS(0.041)AS(0.896)R;EAARS(0.001)PDKPGGS(0.114)PS(0.048)AS(0.838)R 134.32 1.1846e-05 40498890000.0 3136770.0 3019410.0 2811340.0 2579700.0 2884010.0 2923400.0 2763610.0 2793550.0 3431530.0 2775160.0 True False 2962767.1151040294 2874353.0113731897 2992563.474703039 2824873.9123849114 3110965.179227768 2905153.97621983 3042982.6690344266 2783859.827069471 2808450.653831752 2750574.241441812 1.0771449359428993 1.045001064892724 1.0879777137498312 1.0270124215604348 1.1310238903411836 1.0561990774322783 1.106308138565036 1.0121013223806719 1.021041574343982 1.0 21.391301412977995 -7.281649068234485 23.901846085940875 1.0124285594601194 1.0745852253560988 0.5209977196371802 0.02843023503030606 384.3357121625512 454547.19178363413 0.014666178223814002 0.0070621233574777705 5.228184819652398e-08 7.281649068234485 0.062156665895979346 EAASDMS(ph)PY(ph)VRKTAAHAIPK ddPTM_KYSE-520_SHP099_60min_R1 1 EAASDMSPYVRKTAAHAIPK 20 2 F5GWU4;A0A590UJW5;A0A590UKD3;A0A590UJU0;A0A590UJ60;A0A590UK04;A0A5F9UJV3;A0A2R8Y2A8;A0A590UKC4;Q13367-3;Q13367;Q13367-4 F5GWU4 AP3B2 AP-3 complex subunit beta-2 2 EAAS(0.13)DMS(0.585)PY(0.718)VRKT(0.567)AAHAIPK 52.06100000000001 0.046827 846120000.0 707490.0 648600.0 656640.0 661130.0 648510.0 624110.0 608030.0 655500.0 753360.0 786020.0 True False 668244.1193536503 617440.282431551 698968.0650611476 723963.5964240178 699544.0474828453 620214.6979881509 669495.6062009482 653226.2234948496 616568.8146601347 779056.4743143069 0.8577608188697886 0.7925488110152685 0.8971981982132299 0.9292825620391904 0.89793753154873 0.7961100618976796 0.8593672323822358 0.8384837878021516 0.7914301915054528 1.0 19.571368388423398 -11.319902956095989 2.35486336888539 1.8348684036185388 0.8526848759792599 0.4900145303771486 0.045538696153254996 9046896.920809738 2173793.336117434 39646670.29178127 0.01212795161330482 4.787370550507385e-12 11.319902956095989 -0.9821835276392789 EAASDPSDS(ph)PNLPTPGSWWEQLTQASR ddPTM_KYSE-520_SHP099_60min_R1 1 EAASDPSDSPNLPTPGSWWEQLTQASR 27 0 Q68CX2;A0A087WYB2;A0A087WW20;Q9BVN2-2;Q9BVN2-3;Q9BVN2 Q68CX2 DKFZp761A1822;RUSC1 RUN and SH3 domain-containing protein 1 1 EAAS(0.011)DPS(0.178)DS(0.797)PNLPT(0.014)PGSWWEQLTQASR 61.108999999999995 0.024511 36971000.0 5956.8 5537.7 6448.4 6984.2 5220.8 6879.6 4207.0 7754.5 9153.8 8428.9 True False 5626.3644294136 5271.660579742839 6864.074181804795 7647.976268123702 5631.647257711418 6836.661864541953 4632.284616363322 7727.601449413906 7491.700668519617 8354.226503584972 0.6734752076687424 0.6310171956052018 0.8216289298427901 0.9154619239545152 0.6741075616389813 0.8183476784605013 0.5544839626236507 0.9249930494579998 0.8967557517508978 1.0 13.028290543696537 -7.413112292759808 11.281260764762594 0.9358964887701416 0.7356411618725742 0.47927465902516997 0.10179769454282186 0.5027032275534624 48.4543330440128 0.05677148395777329 0.027239120514644284 3.862670895183195e-08 7.413112292759808 -0.20025532689756742 EAASGT(ph)TPQK ddPTM_KYSE-520_SHP099_60min_R1 1 EAASGTTPQK 10 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 EAAS(0.088)GT(0.515)T(0.396)PQK 106.01 0.0057994 648330000.0 1253900.0 1351600.0 951920.0 1089400.0 881710.0 1557100.0 1382300.0 1070900.0 1503900.0 1779400.0 True False 1184343.6674123192 1286667.107207038 1013282.2863258513 1192936.2484599464 951095.5607563461 1547381.5613230816 1522036.3739479491 1067185.297849939 1230829.6702338518 1763635.9003522517 0.6715352455548051 0.729553706039921 0.5745416534804424 0.6764073288719518 0.5392811297197927 0.8773815281340227 0.8630105418266617 0.6051052247443985 0.6978932953156701 1.0 20.75012131900955 -6.2644692649269675 24.979891019775746 0.7873929683879356 0.6419144387139818 0.3597205822627316 0.11183792687516245 366.07931135514156 3018129.7900111675 0.03933803378359522 0.0361632034961325 5.439146232620665e-07 6.2644692649269675 -0.1454785296739538 EAASGTT(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 6 EAASGTTPQK 10 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 EAAS(0.002)GT(0.321)T(0.677)PQK;EAASGT(0.138)T(0.862)PQK;EAASGT(0.132)T(0.868)PQK;EAASGT(0.128)T(0.872)PQK;EAASGT(0.143)T(0.857)PQK;EAAS(0.001)GT(0.16)T(0.839)PQK 193.62 1.2365e-05 12163550000.0 28698100.0 29061600.0 21430300.0 22960600.0 19634570.0 35796700.0 32241500.0 22887700.0 33521200.0 39854300.0 True False 27106159.184755955 27665437.113649096 22811731.42769235 25142768.520643912 21179698.953578573 35573279.51718836 35500785.466716915 22808307.910729352 27434595.080685582 39501221.90817622 0.6862106505911744 0.7003691475154779 0.5774943236115597 0.6365060954086511 0.5361783238709044 0.9005614965501908 0.8987262609050767 0.5774076549770816 0.6945252261932432 1.0 25.235393945693698 -6.258361815563252 24.989988114010423 0.7931122384763851 0.6291469570957987 0.37556964602684684 0.11893034938452611 358.03892799796006 2907303.0495226067 0.04179956423726913 0.040126365286192706 5.516176889638326e-07 6.258361815563252 -0.16396528138058641 EAASS(ph)PAGEPLR ddPTM_KYSE-520_SHP099_60min_R1 1 EAASSPAGEPLR 12 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 EAAS(0.024)S(0.976)PAGEPLR 201.09 1.3446e-11 454120000.0 852070.0 951760.0 876240.0 678390.0 716990.0 953930.0 741400.0 859640.0 991270.0 840820.0 True False 804803.9785405655 906036.0209791157 932723.8324335703 742863.981634609 773413.0338849433 947976.1690276328 816347.9473667141 856658.1094814835 811280.355883178 833370.9889480615 0.9657211364610193 1.0871940984204131 1.119218025108984 0.8913964986617825 0.9280537049426196 1.1375200020152296 0.9795732731195322 1.0279432819743541 0.9734924381123852 1.0 19.668599352699903 -5.231833319364529 24.998592445693927 0.9952927868278187 1.0603593672001945 0.1522158351476931 0.07106021156884275 1456.4667342904218 1229801.9260305038 0.019868096459653102 0.03440753550269062 5.863631653746217e-06 5.231833319364529 0.06506658037237578 EAASSSSGTQPAPPAPAS(ph)PWDSKK ddPTM_KYSE-520_SHP099_60min_R1 5 EAASSSSGTQPAPPAPASPWDSKK 24 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 EAASSSSGTQPAPPAPAS(0.96)PWDS(0.04)KK;EAASSSSGTQPAPPAPAS(0.998)PWDS(0.002)KK;EAASSSSGTQPAPPAPAS(0.988)PWDS(0.012)KK;EAASSSSGTQPAPPAPAS(0.996)PWDS(0.004)KK;EAASSSSGTQPAPPAPAS(0.977)PWDS(0.023)KK 210.28 4.4791e-21 38123000000.0 18615900.0 17000100.0 15180300.0 13360200.0 13558990.0 15319200.0 14460400.0 15381800.0 19215500.0 15092400.0 True False 17583238.91712337 16183389.678329682 16158846.427338785 14629949.391109405 14626005.372900048 15223587.190431291 15922198.351904023 15328444.125939121 15726449.583335737 14958693.077709515 1.175452883870235 1.0818718984511508 1.0802311634709358 0.9780232347242968 0.9777595741097719 1.0177083727398957 1.0644110597890575 1.0247181385638955 1.0513251058523478 1.0 23.834480798483117 -4.417028760860997 1.3935245601455595 1.019549619624795 1.2076373786585914 0.7197343477697629 0.03005192366527163 0.5400713274309173 1.1835554611410573 0.009593398666926939 0.1318137881563413 3.8279939184421996e-05 4.417028760860997 0.18808775903379638 EAATQEDPEQLPELEAHGVS(ph)ES(ph)EGEERPVAEEEILLR ddPTM_KYSE-520_SHP099_60min_R1 2 EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR 37 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 2 EAATQEDPEQLPELEAHGVS(1)ES(1)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(1)ES(1)EGEERPVAEEEILLR 124.0 9.223e-05 863670000.0 265500.0 253690.0 218650.0 225120.0 199714.0 232660.0 202993.0 283230.0 311650.0 274740.0 True False 250772.18573887146 241502.35160354644 232744.52885236917 246515.33711520402 215430.3555827804 231207.88263915523 223513.51346076553 282247.54123637883 255062.21605717143 272306.01734448527 0.9209204709627401 0.8868784977969468 0.854716803991635 0.9052878798610817 0.7911332907133177 0.8490737182155687 0.8208173864112817 1.036508645636416 0.9366749164947784 1.0 18.054869337454328 -7.259596032738057 24.999829588717414 0.989943838180408 0.86052208867815 0.6626333716375339 0.04243775242624997 98.76861312137241 1339540.2514585708 0.021348575416354838 0.011496592857820988 5.5005227754925246e-08 7.259596032738057 -0.12942174950225793 EAATQEDPEQLPELEAHGVS(ph)ESEGEERPVAEEEILLR ddPTM_KYSE-520_SHP099_60min_R1 7 EAATQEDPEQLPELEAHGVSESEGEERPVAEEEILLR 37 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;X6RJY0 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 EAATQEDPEQLPELEAHGVS(0.5)ES(0.5)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.941)ES(0.059)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.941)ES(0.059)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.998)ES(0.002)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.982)ES(0.018)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.999)ES(0.001)EGEERPVAEEEILLR;EAATQEDPEQLPELEAHGVS(0.995)ES(0.005)EGEERPVAEEEILLR 243.46 1.8785999999999996e-31 4066230000.0 1537101.0 1565964.0 1288544.0 1149028.0 1125011.0 1442830.0 1141802.0 1484909.0 1773937.0 1343261.0 True False 1451834.943395122 1490732.7388801167 1371605.6079832953 1258231.2756521346 1213542.9652630202 1433824.7627793855 1257226.489073655 1479758.1972593644 1451834.7581126604 1331360.7525812427 1.0904895165193234 1.1197060871667455 1.0302283624660153 0.9450716293181057 0.9115057379528446 1.0769618677728674 0.944316922844649 1.1114629858138816 1.0904893773515876 1.0 20.34447011385784 -10.20361307053028 13.682041719313501 0.9999999999995803 1.0323515016162697 0.019484140918095916 0.07253664327240494 0.0 0.0 0.07521620870931643 0.0182426100562593 6.257299310979303e-11 10.20361307053028 0.032351501616689315 EAAVSAS(ph)DILQESAIHSPGTVEK ddPTM_KYSE-520_SHP099_60min_R1 1 EAAVSASDILQESAIHSPGTVEK 23 0 F5H3K2;F5H8B7;E7ENF1;G5EA44;F5H7W8;Q96C57 F5H3K2 C12orf43 Uncharacterized protein C12orf43 1 EAAVS(0.04)AS(0.764)DILQES(0.107)AIHS(0.044)PGT(0.044)VEK 48.025 0.06068 4676200000.0 1128000.0 956490.0 1293700.0 1017800.0 1439800.0 1345900.0 808470.0 761800.0 1075800.0 1124000.0 True False 1065427.5913877469 910538.7846792392 1377093.9719931872 1114531.4059872704 1553104.068658618 1337499.7388637445 890198.0375068359 759157.4936054575 880461.8387110714 1114042.2344587678 0.9563619389217867 0.8173287838782914 1.2361236669471667 1.000439096035475 1.3941159685145676 1.2005826148175958 0.799070277563865 0.6814440872381081 0.7903307536081196 1.0 20.087372497055277 -6.773915246442245 24.565377811604517 0.7911647932908532 1.102857431471627 0.4025100394311898 0.16772974890364997 187.23398466223537 368665.50692093425 0.0739216517832929 0.05024372638897338 1.6830024707916461e-07 6.773915246442245 0.31169263818077386 EAAVSASDILQESAIHS(ph)PGTVEK ddPTM_KYSE-520_SHP099_60min_R1 7 EAAVSASDILQESAIHSPGTVEK 23 0 F5H3K2;F5H8B7;E7ENF1;G5EA44;F5H7W8;Q96C57 F5H3K2 C12orf43 Uncharacterized protein C12orf43 1 EAAVSASDILQESAIHS(0.998)PGT(0.002)VEK;EAAVSASDILQESAIHS(0.984)PGT(0.016)VEK;EAAVSASDILQESAIHS(0.979)PGT(0.021)VEK;EAAVSASDILQESAIHS(1)PGTVEK;EAAVSASDILQESAIHS(0.999)PGT(0.001)VEK;EAAVSASDILQESAIHS(1)PGTVEK;EAAVSASDILQESAIHS(0.979)PGT(0.021)VEK 292.98 1.5685999999999998e-48 8869370000.0 3019630.0 4192030.0 3202080.0 4796600.0 2858130.0 3652280.0 2774210.0 3243330.0 4125570.0 3572880.0 True False 2852125.1044168337 3990638.58643469 3408491.2003091513 5252467.421849625 3083048.5704648197 3629484.7657755245 3054654.22048046 3232079.6452289117 3376470.4851563754 3541227.0628585797 0.8054058815744272 1.1269084177881925 0.9625169862894134 1.483233729048056 0.8706158954902188 1.0249229155177926 0.8625976720099546 0.9127004814596341 0.953474720830466 1.0 21.755817921371996 EADIDGDGQVNYEEFVQMMTAK ddPTM_KYSE-520_SHP099_60min_R1 1 EADIDGDGQVNYEEFVQMMTAK 22 0 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;M0QZ52 P0DP25 CALM2;CALM3 0 135.91 2.3681e-06 31938000.0 33877.0 42113.0 82384.0 25907.0 45988.0 36608.0 33855.0 36398.0 66332.0 46089.0 False True 31997.775277874793 40089.82826709825 87694.60445906065 28369.193490776415 49606.99396407312 36379.51589295188 37277.39379295939 36271.743833357075 54287.78089364446 45680.68731669939 0.7004661522721317 0.8776100059344488 1.9197304070992451 0.6210325447622053 1.0859511289782717 0.7963872268544588 0.8160427520391527 0.7940279790864112 1.1884186531011016 1.0 15.47929673736347 EADLVFISVNT(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 1 EADLVFISVNTPTK 14 0 E7ER83;E7ETF4;E7EV97;O60701 E7ER83 UGDH UDP-glucose 6-dehydrogenase 1 EADLVFIS(0.095)VNT(0.903)PT(0.002)K 103.6 0.0042786000000000005 360380000.0 400430.0 465280.0 350510.0 329340.0 304770.0 442000.0 311610.0 489750.0 497400.0 479970.0 True False 378217.3496625851 442927.25040048204 373104.43543582875 360640.37458031834 328753.66509590665 439241.3140484248 343110.5798205315 488051.17155850894 407084.69843361794 475717.8392110101 0.7950455469356963 0.9310713492163505 0.7842977594757258 0.7580972266637076 0.691068608318647 0.9233231925397575 0.7212480835059475 1.0259257301932465 0.8557272081887408 1.0 18.859746601184934 -7.264262461657549 24.999761187854418 0.9556198520905366 0.8038582090856361 0.4355351056373524 0.08333450770348148 252.19327069252446 2233262.0051844018 0.04244881838623522 0.021796466347544508 5.4417368735932885e-08 7.264262461657549 -0.15176164300490047 EAEAAIY(ph)HLQLFEELRR ddPTM_KYSE-520_SHP099_60min_R1 2 EAEAAIYHLQLFEELRR 17 1 P14618;B4DNK4;P14618-3 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 1 EAEAAIY(1)HLQLFEELRR;EAEAAIY(1)HLQLFEELRR 86.539 0.005460100000000001 40020000.0 67603.0 67568.0 71465.0 65050.0 68558.0 63153.0 48412.0 60966.0 72660.0 54962.0 True False 63852.926826760595 64321.931858364325 76071.74824804289 71232.33244200432 73953.12455833972 62758.83870158411 53305.95741558855 60754.52317557137 59466.77560954303 54475.07943978893 1.172149310903474 1.1807588445916646 1.3964504325711844 1.3076131907386588 1.357558819901856 1.1520651157737398 0.9785384062543202 1.115271860093808 1.091632655171644 1.0 15.73330877474205 -6.490842859838571 5.0986808660782135 1.056128278807744 1.2836024965957502 0.6898102242190842 0.07477638829753407 0.12262153391156252 8.384438770925437 0.029440887774722545 0.02477019548544008 3.229662494561511e-07 6.490842859838571 0.22747421778800625 EAEAAIYHLQLFEELR ddPTM_KYSE-520_SHP099_60min_R1 6 EAEAAIYHLQLFEELR 16 0 P14618;B4DNK4;P14618-3 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;;;; 232.78 1.069e-22 3953527000.0 2248749.0 1400141.0 867894.0 1768266.0 1469686.0 1157504.0 1156218.0 1426732.0 986478.0 792584.0 False True 2124006.4102000054 1332876.1247055111 923839.8359194977 1936321.4689914403 1585341.9268305353 1150279.5881816929 1273099.7990402586 1421782.9996937534 807358.4622866894 785562.3223810208 2.7038038226708636 1.6967159533130296 1.1760236070377728 2.464885870700234 2.018098222971542 1.4642754055403557 1.6206222762587739 1.809892046991718 1.027745907975328 1.0 19.583366210329753 -7.5280820045395505 0.5018881616718035 0.9464205794835207 2.007976709584169 0.39194689578496833 0.4259797054232725 1.0267002494077853 0.6426489964981731 0.46639665511354367 0.2799345904511669 2.964271615706453e-08 7.5280820045395505 1.0615561301006484 EAEAAIYHLQLFEELRR ddPTM_KYSE-520_SHP099_60min_R1 7 EAEAAIYHLQLFEELRR 17 1 P14618;B4DNK4;P14618-3 P14618 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;;;;; 231.77 3.0737e-19 3514177000.0 2281416.0 1841630.0 1206041.0 1390614.0 1808455.0 1315651.0 1180145.0 1191587.0 1265443.0 854748.0 False True 2154861.3065899583 1753155.3304570126 1283784.332593829 1522777.5364566545 1950770.119798596 1307439.5340930407 1299445.5737052765 1187453.6628154973 1035670.4504220609 847175.5977038804 2.543582832685843 2.069411979297598 1.5153698195194707 1.7974756834166066 2.302675059439641 1.5432922497255874 1.5338562362126504 1.4016617877496476 1.2224979723555098 1.0 19.692301508551502 -1.000000000000001 0.11357318111079343 0.6150640921641122 5.906252852584 0.6955504916423836 0.2536691619109036 65.27596721540897 0.515832721618135 2.2886767014003473 54.29880582610502 0.09999999999999974 1.000000000000001 5.291188760419888 EAEALLQSMGLTPES(ph)PIVPPPMS(ph)PSSK ddPTM_KYSE-520_SHP099_60min_R1 10 EAEALLQSMGLTPESPIVPPPMSPSSK 27 0 E9PGG1;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ETL8 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 2 EAEALLQSMGLTPES(1)PIVPPPMS(0.926)PS(0.069)S(0.006)K;EAEALLQSMGLT(0.002)PES(0.998)PIVPPPMS(0.725)PS(0.129)S(0.146)K;EAEALLQSMGLT(0.002)PES(0.998)PIVPPPMS(0.815)PS(0.152)S(0.033)K;EAEALLQS(0.003)MGLT(0.044)PES(0.953)PIVPPPMS(0.805)PS(0.159)S(0.036)K;EAEALLQS(0.002)MGLT(0.019)PES(0.978)PIVPPPMS(0.722)PS(0.216)S(0.063)K;EAEALLQSMGLTPES(1)PIVPPPMS(0.872)PS(0.107)S(0.021)K;EAEALLQSMGLT(0.001)PES(0.999)PIVPPPMS(0.962)PS(0.032)S(0.006)K;EAEALLQS(0.001)MGLT(0.009)PES(0.99)PIVPPPMS(0.786)PS(0.168)S(0.046)K;EAEALLQS(0.006)MGLT(0.029)PES(0.963)PIVPPPMS(0.774)PS(0.117)S(0.111)K;EAEALLQSMGLT(0.006)PES(0.994)PIVPPPMS(0.724)PS(0.131)S(0.146)K 134.12 1.9059e-06 1937465000.0 1066024.0 903087.0 888264.0 843175.0 940999.0 898759.0 876969.0 951043.0 1205069.0 974716.0 True False 1006889.5236538409 859701.3449587761 945522.9187126502 923310.098490193 1015050.2677480818 893149.5117032767 965621.5849126513 947744.0538081051 986258.8469173737 966080.7745575721 1.0422415497451107 0.8898855743739299 0.9787203550817616 0.9557276397649396 1.0506888186579801 0.9245081107346379 0.9995246881451181 0.9810194745280336 1.0208865271840675 1.0 19.88178429308565 -6.9963055375735514 0.5733962000722771 1.007195487435885 0.9672718225548046 0.05086966011456717 0.04665038904136855 2.4173502568913383 1.6450097772386405 0.04279916627891047 0.028775539310229928 1.0085430998720125e-07 6.9963055375735514 -0.039923664881080456 EAEALLQSMGLTPESPIVPPPMS(ph)PSSK ddPTM_KYSE-520_SHP099_60min_R1 23 EAEALLQSMGLTPESPIVPPPMSPSSK 27 0 E9PGG1;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ETL8 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 EAEALLQSMGLTPESPIVPPPMS(0.732)PS(0.208)S(0.06)K;EAEALLQSMGLTPESPIVPPPMS(0.748)PS(0.199)S(0.053)K;EAEALLQSMGLTPESPIVPPPMS(0.664)PS(0.16)S(0.176)K;EAEALLQSMGLTPES(0.001)PIVPPPMS(0.669)PS(0.153)S(0.177)K;EAEALLQSMGLTPESPIVPPPMS(0.81)PS(0.164)S(0.025)K;EAEALLQSMGLTPESPIVPPPMS(0.683)PS(0.136)S(0.181)K;EAEALLQSMGLTPESPIVPPPMS(0.734)PS(0.133)S(0.133)K;EAEALLQSMGLTPESPIVPPPMS(0.758)PS(0.203)S(0.039)K;EAEALLQSMGLTPESPIVPPPMS(0.796)PS(0.168)S(0.036)K;EAEALLQSMGLTPESPIVPPPMS(0.704)PS(0.239)S(0.057)K;EAEALLQSMGLTPESPIVPPPMS(0.62)PS(0.161)S(0.219)K;EAEALLQSMGLTPESPIVPPPMS(0.692)PS(0.163)S(0.145)K;EAEALLQSMGLTPESPIVPPPMS(0.692)PS(0.231)S(0.077)K;EAEALLQSMGLTPESPIVPPPMS(0.919)PS(0.06)S(0.021)K;EAEALLQSMGLTPESPIVPPPMS(0.667)PS(0.268)S(0.066)K;EAEALLQSMGLTPESPIVPPPMS(0.97)PS(0.024)S(0.006)K;EAEALLQSMGLTPESPIVPPPMS(0.713)PS(0.236)S(0.05)K;EAEALLQSMGLTPESPIVPPPMS(0.546)PS(0.192)S(0.263)K;EAEALLQSMGLTPESPIVPPPMS(0.642)PS(0.259)S(0.098)K;EAEALLQSMGLTPESPIVPPPMS(0.905)PS(0.073)S(0.021)K;EAEALLQSMGLTPESPIVPPPMS(0.813)PS(0.149)S(0.038)K;EAEALLQSMGLTPESPIVPPPMS(0.806)PS(0.154)S(0.04)K;EAEALLQSMGLT(0.002)PES(0.038)PIVPPPMS(0.772)PS(0.155)S(0.033)K 172.74 1.2109e-16 13020004000.0 5438067.0 7666140.0 5250842.0 4957157.0 4930069.0 7865377.0 5793198.0 7640887.0 8983311.0 7805597.0 True False 5136406.5829921905 7297847.1272892635 5589319.676964253 5428283.710856398 5318037.382044535 7816286.264629549 6378830.990003977 7614382.54639344 7352168.173241677 7736445.483242571 0.6639233216491783 0.9433075102896636 0.7224661104470945 0.7016508708830511 0.6874006148642295 1.010320085827518 0.8245170219089325 0.9842223489956048 0.9503289578097263 1.0 22.883239440400626 -6.261152216667866 24.999993289024793 0.9448065406728107 0.7513149854061241 0.5930264089602149 0.08676075703663055 20.664367549021758 1799059.9634022163 0.02967329264306839 0.02793844743453697 5.480848319963661e-07 6.261152216667866 -0.1934915552666866 EAEAYTGLS(ph)PPVPSFNCEVR ddPTM_KYSE-520_SHP099_60min_R1 3 EAEAYTGLSPPVPSFNCEVR 20 0 O43164-2;O43164 O43164-2 PJA2 E3 ubiquitin-protein ligase Praja-2 1 EAEAYTGLS(1)PPVPSFNCEVR;EAEAYTGLS(1)PPVPSFNCEVR;EAEAYTGLS(1)PPVPSFNCEVR 272.48 2.3721999999999998e-32 0.0 666260.0 665250.0 521780.0 462070.0 452550.0 712450.0 597650.0 658070.0 657410.0 627980.0 True False 629301.2296436182 633290.3914393921 555414.7736775175 505984.9938735887 488163.11034272565 708003.3352800917 658066.2945019112 655787.3087646924 538040.9159574694 622416.585761047 1.011061151068385 1.0174703019281683 0.8923521422527577 0.8129362318565242 0.7843028632436495 1.1375071800414756 1.0572762833710065 1.0536147714682798 0.8644385902724475 1.0 19.247520979292403 -6.264410763298933 24.999986816926025 1.0280875906046383 0.9042848213159855 0.28546847577860734 0.09388341147803476 380.5268622652012 3201578.171032571 0.035229659969921785 0.03240059626900756 5.439878962036847e-07 6.264410763298933 -0.12380276928865275 EAEDS(ph)DS(ph)DDNIKR ddPTM_KYSE-520_SHP099_60min_R1 7 EAEDSDSDDNIKR 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 EAEDS(1)DS(1)DDNIKR;EAEDS(1)DS(1)DDNIKR;EAEDS(1)DS(1)DDNIKR;EAEDS(1)DS(1)DDNIKR;EAEDS(1)DS(1)DDNIKR;EAEDS(1)DS(1)DDNIKR;EAEDS(1)DS(1)DDNIKR 226.62 1.1025e-11 5475760000.0 9822330.0 9041590.0 8375560.0 8485400.0 8858160.0 8831120.0 8537450.0 9014590.0 10885060.0 8567060.0 True False 9277465.77457058 8607218.444696717 8915461.998969829 9291849.864771461 9555246.795964029 8776001.704342358 9400498.763482533 8983320.491311124 8908607.49403265 8491162.513471814 1.0926025452758963 1.0136678494894866 1.0499695400747346 1.0942965524484194 1.1253166784646946 1.033545370309263 1.1070920793905423 1.057961201079177 1.049162288426176 1.0 23.01753065403384 -8.126992171914903 1.8318470416255639 1.0002856159351283 1.0719484589836135 0.31581794063231694 0.032392400419003625 0.6787300065818643 4.689063869657915 0.03177292665642703 0.00896798814445038 7.464622131448305e-09 8.126992171914903 0.07166284304848514 EAEEGEDDRDS(ph)ANGEDDS ddPTM_KYSE-520_SHP099_60min_R1 19 EAEEGEDDRDSANGEDDS 18 1 P07910;G3V2Q1;P07910-3;P07910-2;G3V2D6;G3V4C1;P07910-4 P07910;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 EAEEGEDDRDS(0.999)ANGEDDS(0.001);EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(0.992)ANGEDDS(0.008);EAEEGEDDRDS(0.998)ANGEDDS(0.002);EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(0.989)ANGEDDS(0.011);EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(1)ANGEDDS;EAEEGEDDRDS(0.998)ANGEDDS(0.002);EAEEGEDDRDS(1)ANGEDDS 223.11 3.7162e-15 62377350000.0 14318840.0 11345160.0 9444230.0 11126790.0 11288480.0 11931830.0 13503070.0 13190700.0 12415620.0 11630370.0 True False 13524545.401300121 10800121.484167663 10053020.177102264 12184276.776208594 12176819.153334795 11857359.023082383 14868092.092863562 13144944.540432518 10161256.38031042 11527333.970090954 1.1732587462453306 0.9369140785015746 0.8721027952504913 1.0569900037443314 1.0563430525157862 1.0286297815130296 1.2898118620871577 1.140328247150525 0.8814923213533168 1.0 23.458555550759346 -5.500777701745181 22.497110750076633 1.0800872720981585 0.9844027857506906 0.058306304099706385 0.12133095427211385 503.50439015286406 512525.4103575582 0.035302527399025244 0.05173660431199234 3.1566199594630027e-06 5.500777701745181 -0.09568448634746785 EAEEGPTGASESQDS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 EAEEGPTGASESQDSPR 17 0 H0Y507;Q5TCZ1-2;Q5TCZ1-3;Q5TCZ1 H0Y507 SH3PXD2A SH3 and PX domain-containing protein 2A 1 EAEEGPTGASESQDS(1)PR;EAEEGPTGASESQDS(1)PR 267.6 4.4213999999999996e-29 1132260000.0 960650.0 980350.0 873130.0 841620.0 875380.0 976890.0 918430.0 984670.0 1198940.0 1017220.0 True False 907360.8294917019 933252.5144646494 929413.3568573938 921607.3117577208 944267.4257691196 970792.867151053 1011273.8674130165 981254.4095937046 981242.7188178578 1008208.2221851848 0.8999736458457889 0.9256545363634539 0.9218466348578158 0.9141041418609286 0.9365797709152973 0.9628892581801823 1.0030406865966508 0.9732656290651344 0.9732540334685209 1.0 19.943362194363758 -6.255953916901702 2.0339410468249794 0.9852164415373034 0.9167122088747537 0.8851866354092354 0.01169213183864238 0.10620626122451628 0.8631789138696959 0.00464005460194386 0.004277810827975912 5.546845675563251e-07 6.255953916901702 -0.06850423266254968 EAEGEQFVEEALEKS(ph)PCQTDVLR ddPTM_KYSE-520_SHP099_60min_R1 2 EAEGEQFVEEALEKSPCQTDVLR 23 1 O14879 O14879 IFIT3 Interferon-induced protein with tetratricopeptide repeats 3 1 EAEGEQFVEEALEKS(0.996)PCQT(0.004)DVLR;EAEGEQFVEEALEKS(1)PCQTDVLR 190.6 3.0759e-15 366150000.0 237025.0 233637.0 199817.0 178557.0 201408.0 257540.0 196604.0 222446.0 282180.0 231362.0 True False 223876.75075237706 222412.72782371312 212697.52353850377 195527.0035948806 217257.6637452387 255932.5973303873 216478.65099013434 221674.38674528687 230943.22517892747 229312.31267691206 0.9762962491587035 0.9699118430551958 0.9275451503477811 0.8526668337707927 0.9474313054063623 1.116087463175088 0.9440341360785994 0.9666920374119353 1.0071121889748385 1.0 17.806954295386998 -6.020344251173157 24.971234660547534 1.0042234689451837 0.9298009528149693 0.3246178930418443 0.052246106846121215 976.900026768851 1199079.7884251936 0.0178583779409531 0.0180769011239767 9.542358942637282e-07 6.020344251173157 -0.07442251613021433 EAEGSSAEYKK ddPTM_KYSE-520_SHP099_60min_R1 2 EAEGSSAEYKK 11 1 P49321-4;P49321;P49321-3;Q5T624;P49321-2;H0YF33;H0YDS9;E9PRH9 P49321-4 NASP Nuclear autoantigenic sperm protein 0 ; 103.88 0.0026579999999999998 839820000.0 1086670.0 1026060.0 680600.0 706930.0 987940.0 1105180.0 804820.0 945060.0 1037210.0 1024010.0 False True 1026390.2488770596 976766.5374525416 724472.5649985025 774116.4146537451 1065685.257390328 1098282.1616742958 886179.0598862668 941781.8074386616 848878.8099363348 1014938.0680677245 1.0112836252473396 0.962390285854727 0.7138096281852738 0.762722809409973 1.0500002817109992 1.082117418026545 0.8731360934893361 0.9279204683214411 0.8363848363205656 1.0 19.952960265584316 -4.531055261935092 24.99834973733233 0.9036790621468846 0.9990603948212812 0.08465922901037515 0.11164469322402445 428.8894775623649 1311260.454716036 0.031027142037192142 0.0823917942352861 2.9440469937973243e-05 4.531055261935092 0.09538133267439652 EAEMEEHREHIK ddPTM_KYSE-520_SHP099_60min_R1 8 EAEMEEHREHIK 12 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;H7C044 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ;;;;;;; 201.0 1.1992e-07 8777567000.0 12839551.0 12640174.0 10009226.0 8009493.0 13136639.0 11069770.0 8589354.0 9630959.0 11917261.0 7602320.0 False True 12127315.511019636 12032921.067752019 10654436.723287834 8770712.806578126 14170417.75204853 11000679.459307307 9457649.726336764 9597551.45111173 9753386.812102385 7534969.359315468 1.6094711116544436 1.5969435964428629 1.4139986793862371 1.1640011244020403 1.8806204877966317 1.459950125172996 1.2551676424064406 1.273734635595604 1.294416254001656 1.0 22.8451702144912 -7.714605812127826 0.5653742450934477 1.0038652513284014 1.5324862334184741 0.4481112514345731 0.17905803943182558 0.7992030193631872 0.6190472883690337 0.19293565525421377 0.0968512323078393 1.929275227551188e-08 7.714605812127826 0.5286209820900727 EAET(ph)KSPLVS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 EAETKSPLVSPSK 13 1 P35612 P35612 ADD2 Beta-adducin 2 EAET(0.618)KS(0.382)PLVS(1)PSK 149.59 5.6335e-05 379360000.0 1503500.0 1358700.0 1349900.0 1437800.0 1462800.0 1384000.0 1371900.0 1440100.0 1622300.0 1457900.0 True False 1420097.8578470552 1293426.0125497219 1436916.7139163674 1574448.079709667 1577914.0378065188 1375361.9426312658 1510585.040453729 1435104.6292218657 1327731.214854963 1444984.1402290368 0.9827774702232808 0.8951143313896218 0.9944169447345003 1.089595405151028 1.0919940183955321 0.9518180195481346 1.045399045150969 0.9931628931196399 0.918855216393248 1.0 20.462622227490623 -4.956827342095042 9.179130363336588 1.016865072622748 0.9400605504760247 0.21757558737765803 0.05502490915922384 0.47149538382861683 93.46995584337851 0.014933126398253008 0.031119365876936464 1.1045176441295427e-05 4.956827342095042 -0.07680452214672329 EAETKS(ph)PLVS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 11 EAETKSPLVSPSK 13 1 P35612 P35612 ADD2 Beta-adducin 2 EAET(0.003)KS(0.997)PLVS(0.915)PS(0.085)K;EAET(0.021)KS(0.979)PLVS(0.969)PS(0.031)K;EAET(0.049)KS(0.951)PLVS(0.997)PS(0.003)K;EAET(0.053)KS(0.947)PLVS(0.905)PS(0.095)K;EAET(0.055)KS(0.945)PLVS(0.935)PS(0.065)K;EAET(0.148)KS(0.852)PLVS(0.799)PS(0.201)K;EAET(0.065)KS(0.935)PLVS(0.72)PS(0.28)K;EAET(0.005)KS(0.995)PLVS(1)PSK;EAET(0.005)KS(0.995)PLVS(0.939)PS(0.061)K;EAET(0.02)KS(0.98)PLVS(0.999)PS(0.001)K;EAET(0.406)KS(0.594)PLVS(0.997)PS(0.003)K 211.9 1.1601000000000001e-10 16634750000.0 18973640.0 16417010.0 15418710.0 16801230.0 16305450.0 16077860.0 16567690.0 16960640.0 18616170.0 16575390.0 True False 17921134.3661864 15628312.197165586 16412624.717408255 18398013.847726006 17588596.14968026 15977512.11196065 18242513.790272523 16901807.498483144 15235942.803455906 16428544.940058284 1.0908534159034793 0.9512901023302762 0.9990309414066726 1.1198809094082032 1.0706119266103344 0.9725457835892779 1.1104156732585109 1.0288073326123295 0.9274067094223046 1.0 23.969701372087975 -7.637258629126689 6.734424585872283 0.9649279557946167 1.0426074339698848 0.24467065527920995 0.0561189199696263 0.3112936803728931 16.841384705055805 0.03927053320493743 0.0144653316384865 2.3053738937989885e-08 7.637258629126689 0.0776794781752681 EAETKS(ph)PLVSPSK ddPTM_KYSE-520_SHP099_60min_R1 7 EAETKSPLVSPSK 13 1 P35612 P35612 ADD2 Beta-adducin 1 EAET(0.116)KS(0.884)PLVSPSK;EAET(0.319)KS(0.68)PLVSPSK;EAET(0.41)KS(0.59)PLVSPSK;EAET(0.02)KS(0.98)PLVSPSK;EAET(0.146)KS(0.451)PLVS(0.325)PS(0.078)K;EAET(0.026)KS(0.974)PLVSPSK;EAETKS(1)PLVSPSK 210.91 5.8082000000000006e-11 13176540000.0 15237950.0 13573190.0 12013360.0 11422800.0 12382490.0 12910460.0 12253830.0 13573380.0 16286410.0 13304770.0 True False 14392670.537399763 12921113.578626463 12787760.407655627 12508419.477609947 13356921.516269365 12829881.030248025 13492566.722256074 13526297.112830706 13329208.490985652 13186900.088754425 1.0914369897800014 0.9798446558069686 0.9697321069840229 0.9485488927209607 1.0128932066194944 0.9729262331477844 1.0231795669523815 1.0257374380477573 1.0107916493848759 1.0 23.652602127042506 -6.783145731620803 24.989168903015866 1.0170719569193676 0.9925984093461603 0.054460793157848686 0.036928462062695996 647.71324055685 745664.817987202 0.015630028645745666 0.010548949199785378 1.647609427828594e-07 6.783145731620803 -0.0244735475732073 EAETKSPLVS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 EAETKSPLVSPSK 13 1 P35612 P35612 ADD2 Beta-adducin 1 EAET(0.005)KS(0.154)PLVS(0.831)PS(0.011)K 145.52 1.4016e-05 907550000.0 633560.0 552420.0 599940.0 492740.0 500540.0 599910.0 544880.0 624960.0 702390.0 596510.0 True False 598415.1638294519 525880.914000675 638613.09233794 539569.8614523171 539929.6503169767 596165.7391646851 599961.7879163409 622792.1596267599 574853.6818109958 591225.3854777573 1.012160807922489 0.8894762080889358 1.080151678233318 0.912629725830026 0.9132382735573346 1.0083561257826161 1.0147767715209384 1.053392115637075 0.972308862121115 1.0 19.17334869032921 -6.479016308186769 20.74470683394479 1.0141399139119354 0.9613409482018839 0.16075667045836672 0.0548094463269395 113.79367382882339 53818.02542696064 0.018814362342417575 0.016589103634725388 3.3188199482189646e-07 6.479016308186769 -0.05279896571005149 EAFAQRPSSAPDLMCLS(ph)PDRK ddPTM_KYSE-520_SHP099_60min_R1 2 EAFAQRPSSAPDLMCLSPDRK 21 2 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 EAFAQRPS(0.003)S(0.003)APDLMCLS(0.994)PDRK;EAFAQRPS(0.138)S(0.032)APDLMCLS(0.83)PDRK 122.53 5.7109e-05 2362800000.0 555640.0 594200.0 559990.0 543090.0 591310.0 574540.0 508740.0 499550.0 639100.0 440180.0 True False 524817.5415591209 565653.740087617 596087.8514156798 594705.1103140377 637842.7329063255 570954.0827452083 560168.4040239309 497817.1776458465 523055.55039993126 436280.34765485796 1.202936470506127 1.2965372910519144 1.3662954442478024 1.363126057615847 1.4620019818333045 1.3086862285094054 1.2839643294386502 1.1410488240457497 1.1988978032394009 1.0 18.73489596309636 -7.68159648730418 0.9365701498571983 1.0186534451762739 1.3413270735203104 0.6847920307838017 0.07005606274177152 0.3137801922506179 0.5632480297166177 0.070020815061071 0.025426730429336793 2.081629877657003e-08 7.68159648730418 0.32267362834403657 EAFLNTEDKGDS(ph)LDSVEALIK ddPTM_KYSE-520_SHP099_60min_R1 1 EAFLNTEDKGDSLDSVEALIK 21 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 EAFLNT(0.001)EDKGDS(0.968)LDS(0.031)VEALIK 78.991 0.0051998999999999995 102760000.0 40368.0 44061.0 41150.0 38500.0 39365.0 41274.0 29734.0 37499.0 45722.0 43710.0 True False 38128.70656838706 41944.24342309068 43802.5948423279 42159.02842455293 42462.801543788315 41016.39365618706 32739.802895875222 37368.9247213324 37420.03735782448 43322.76340586539 0.8801079056564726 0.9681802388767269 1.0110757347578974 0.9731380251437307 0.9801498843917087 0.9467630970796733 0.7557182488373454 0.8625702005951237 0.8637500107566604 1.0 15.402837649845294 -6.549588565626554 24.99016218309845 0.8579404273687157 0.965863134102214 0.3166824247900514 0.0635185207094783 219.30386839945294 205182.52410950308 0.02337937338277598 0.018110022696906692 2.8210542271443337e-07 6.549588565626554 0.10792270673349835 EAFLNTEDKGDSLDSVEALIK ddPTM_KYSE-520_SHP099_60min_R1 1 EAFLNTEDKGDSLDSVEALIK 21 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 86.539 0.0028525 59401000.0 70045.0 60461.0 37236.0 54227.0 52933.0 36657.0 45747.0 61786.0 53065.0 36808.0 False True 66159.46421875425 57556.3628061888 39636.29213970651 59380.71777605793 57098.5259524285 36428.21006577626 50371.553207694975 61571.6787869608 43429.733659790814 36481.90975619066 1.813486866803281 1.5776685812458595 1.0864642888652662 1.627675693868563 1.5651188858812244 0.9985280460706888 1.3807268737938634 1.6877317881230882 1.1904457291307555 1.0 15.154893633275508 -1.0000000000017835 0.037094020409233784 2.0745718843217398e-14 3.6160483279234263 0.2971765542623902 0.24118663692146436 1376.2242917418002 3.904542121527184 109.03593192493504 325.06965285187505 0.09999999999958935 1.0000000000017835 3.6160483279234055 EAFQLFDR ddPTM_KYSE-520_SHP099_60min_R1 8 EAFQLFDR 8 0 G8JLA2;P60660-2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;G3V1Y7 G8JLA2 MYL6 Myosin light polypeptide 6 0 ;;;;;;; 164.71 0.0013800999999999998 4627430000.0 3431100.0 3730150.0 2946560.0 2420747.0 3656610.0 3930410.0 2965910.0 2991410.0 3162700.0 3186950.0 False True 3240770.043271721 3550947.994930705 3136499.972262694 2650814.067055878 3944364.403735093 3905878.853278441 3265733.127292168 2981033.4969103397 2588433.4051789404 3158716.102409582 1.0259769913477015 1.124174468298026 0.9929667214695423 0.839206177799183 1.2487239358821105 1.2365400139312603 1.033879912411549 0.9437484725633621 0.8194574381674853 1.0 21.590906846373766 -7.259600987145688 3.6099110522123077 0.9052607350148719 1.0766097734895677 0.25689002967932817 0.11873476650064216 0.3378863912141075 9.674932897019861 0.07244544110847286 0.03504499881405057 5.500460026188297e-08 7.259600987145688 0.17134903847469574 EAFSLFDK ddPTM_KYSE-520_SHP099_60min_R1 1 EAFSLFDK 8 0 P0DP25;P0DP24;P0DP23;E7EMB3;M0QZ52;F8WBR5;G3V479;P27482 P0DP25;P27482 CALM2;CALM3;CALM1;CALML3 Calmodulin-like protein 3 0 133.86 0.005700899999999999 1004800000.0 574490.0 617700.0 379570.0 376340.0 645530.0 688170.0 540740.0 565190.0 551340.0 590820.0 False True 542621.8944825775 588024.7648133975 404037.68953347317 412107.2404492527 696329.5384367245 683874.8757662997 595403.276313835 563229.4878063381 451230.55415036395 585585.7944510048 0.9266309046845874 1.0041650094409809 0.6899718083364101 0.7037521134466884 1.1891161722759063 1.1678474482248025 1.0167652322782765 0.9618223207316255 0.7705626714756616 1.0 19.159521030579825 -3.873561787129586 13.243485535727954 0.9462375700840104 0.0005579456685878099 0.001030833223213068 0.165800176084225 2599735.59085013 2619720.3217421537 0.0452938367747359 72710982.7563329 0.0001337944852033482 3.873561787129586 -0.9456796244154226 EAFSLFDKDGDGTITTK ddPTM_KYSE-520_SHP099_60min_R1 6 EAFSLFDKDGDGTITTK 17 1 P0DP25;P0DP24;P0DP23;E7EMB3;M0QZ52;F8WBR5;G3V479 P0DP25 CALM2;CALM3;CALM1 0 ;;;;; 265.87 1.5275999999999998e-29 13569620000.0 13903640.0 12117120.0 9441140.0 9326460.0 13627780.0 13003280.0 9925320.0 10863060.0 10845660.0 10252030.0 False True 13132377.37298081 11534995.367032086 10049730.99075811 10212843.954297554 14700208.75453849 12922121.706198184 10928668.207388446 10825378.580317253 8876361.540839475 10161204.99015865 1.292403547187544 1.1351995534194994 0.9890294507877261 1.0050819724815037 1.44669935984718 1.271711545895742 1.0755287604150394 1.0653636641325386 0.8735540272474009 1.0 23.276568161818076 -7.326780134948347 2.132885864153512 0.9471157415201219 1.1783389112558698 0.3368624330180715 0.13379719347265703 0.4405403426428708 3.738245097437763 0.10766705660514952 0.0419391635180411 4.7121582279700195e-08 7.326780134948347 0.23122316973574786 EAGELPT(ph)SPLHLLS(ph)PGT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 EAGELPTSPLHLLSPGTPR 19 0 Q969R5;H7C228;Q969R5-2;Q969R5-3 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 3 EAGELPT(0.5)S(0.5)PLHLLS(1)PGT(1)PR 72.035 0.0088344 18661000.0 21408.0 22070.0 18084.0 18190.0 19987.0 21387.0 19220.0 23341.0 25922.0 20594.0 True False 20220.455564210028 21009.724072254612 19249.72357542304 19918.772130977086 21559.863189526153 21253.51579989515 21162.94516912362 23260.03551883034 21215.218240442817 20411.55318188956 0.9906377718551527 1.029305505810101 0.943079804064231 0.9758577386776376 1.056257845613407 1.0412493165269086 1.036812092668222 1.1395524540223687 1.0393730477730778 1.0 14.317098345484698 -5.7667275451202995 24.230004497307814 1.0578674248221964 0.9849305488832801 0.4185041947834208 0.038627341545073364 82.86952429371695 379702.0203393124 0.01199421075012584 0.014020157382176764 1.71108843070397e-06 5.7667275451202995 -0.07293687593891629 EAGELPT(ph)SPLHLLS(ph)PGTPR ddPTM_KYSE-520_SHP099_60min_R1 4 EAGELPTSPLHLLSPGTPR 19 0 Q969R5;H7C228;Q969R5-2;Q969R5-3 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 2 EAGELPT(0.5)S(0.5)PLHLLS(0.996)PGT(0.004)PR;EAGELPT(0.5)S(0.5)PLHLLS(1)PGTPR;EAGELPT(0.5)S(0.5)PLHLLS(0.997)PGT(0.003)PR;EAGELPT(0.5)S(0.5)PLHLLS(0.998)PGT(0.002)PR 154.13 9.3883e-07 341821000.0 291320.0 267550.0 243928.0 242137.0 277351.0 284961.0 273476.0 307387.0 334454.0 301020.0 True False 275159.8988679776 254696.49639926245 259651.98917859935 265149.6276788563 299176.9457886759 283182.4526980842 301121.6229485564 306320.7462416648 273725.5844992307 298353.196990016 0.9222622772069223 0.8536744334192121 0.870283917846834 0.8887105295128753 1.0027609853253474 0.9491517287396808 1.0092790222678025 1.0267050909191882 0.9174548396355565 1.0 18.186661710545078 -5.731017519023348 7.946562130623461 0.9850638438520624 0.8802379429222867 0.6805660613538023 0.03369551278389376 0.11849917236482475 25.53868350278519 0.009774627326840882 0.012446838087671445 1.8577295145512712e-06 5.731017519023348 -0.10482590092977562 EAGELPTS(ph)PLHLLS(ph)PGT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 EAGELPTSPLHLLSPGTPR 19 0 Q969R5;H7C228;Q969R5-2;Q969R5-3 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 3 EAGELPT(0.47)S(0.53)PLHLLS(1)PGT(1)PR 64.68 0.01401 17591000.0 20359.0 18651.0 17068.0 19311.0 18558.0 19115.0 20394.0 25077.0 27381.0 21595.0 True False 19229.645685339692 17754.97796427824 18168.23058976556 21146.311633936155 20018.409019423958 18995.69619465077 22455.62454625948 24990.013740015806 22409.300618839785 21403.685100655777 0.8984268641081121 0.8295290217914043 0.8488365673632955 0.9879752731593058 0.9352786179240987 0.8874965271316185 1.0491475855983077 1.1675565970296464 1.0469832887867145 1.0 14.385571588266648 -6.82447934931816 4.61739638495508 1.0848513566172935 0.8980485517533494 0.6740790787237874 0.05701877015985328 0.12111796882726182 5.086308685991297 0.025446757340275662 0.01716056718552549 1.4980304826291714e-07 6.82447934931816 -0.18680280486394407 EAGELPTS(ph)PLHLLSPGTPR ddPTM_KYSE-520_SHP099_60min_R1 6 EAGELPTSPLHLLSPGTPR 19 0 Q969R5;H7C228;Q969R5-2;Q969R5-3 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 1 EAGELPT(0.451)S(0.549)PLHLLSPGTPR;EAGELPT(0.13)S(0.87)PLHLLSPGTPR;EAGELPT(0.007)S(0.993)PLHLLSPGTPR;EAGELPT(0.036)S(0.964)PLHLLSPGTPR;EAGELPT(0.035)S(0.965)PLHLLSPGTPR;EAGELPT(0.034)S(0.966)PLHLLSPGTPR 217.98 7.413200000000001e-19 1262219000.0 528491.0 787979.0 577992.0 775928.0 524814.0 705410.0 570888.0 626921.0 765569.0 693621.0 True False 499174.5507093107 750123.3060594073 615250.2891398983 849671.9638287392 566113.8760168107 701007.2745314466 628598.9303699606 624746.357375461 626560.9680239775 687476.057568972 0.7260973603567719 1.091126444042235 0.8949406781023387 1.2359295345256365 0.8234670426468117 1.0196824555757231 0.9143575597276644 0.9087536220310952 0.9113931476240783 1.0 19.390949944720763 -6.793378172438332 24.872681938022122 0.9260221956012115 0.9735997871326694 0.00952799137236171 0.1344836689972177 887.177768481987 690890.8873578482 0.053477359087524386 0.036057712194126186 1.609243736940081e-07 6.793378172438332 0.04757759153145791 EAGS(ph)PAQEFK ddPTM_KYSE-520_SHP099_60min_R1 7 EAGSPAQEFK 10 0 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 EAGS(1)PAQEFK;EAGS(1)PAQEFK;EAGS(1)PAQEFK;EAGS(1)PAQEFK;EAGS(1)PAQEFK;EAGS(1)PAQEFK;EAGS(1)PAQEFK 190.26 3.2406999999999997e-06 8525320000.0 13205750.0 12228630.0 11129030.0 10562390.0 11296530.0 11011050.0 10658780.0 11680230.0 13616830.0 11585980.0 True False 12473200.722490042 11641148.259252142 11846425.080877602 11566236.369901642 12185502.64253656 10942325.95260839 11736273.502068222 11639714.008316189 11144356.92435031 11483337.230956051 1.0861999845189236 1.013742610281502 1.0316186699579597 1.007219080767054 1.0611464592094062 0.9528872776731456 1.0220263731722796 1.0136177118389058 0.9704806799810826 1.0 23.453038636093098 -1.0000000000000002 0.46725161685665406 0.9990855096926384 2.8987398406398985 0.416726003843387 0.028211802864102128 97.34986846663669 1.128926848476438 0.016283840549902794 178.268405002729 0.09999999999999995 1.0000000000000002 1.8996543309472602 EAHLEKEEK ddPTM_KYSE-520_SHP099_60min_R1 1 EAHLEKEEK 9 1 A0A1W2PRI9;E9PNW5 A0A1W2PRI9 C4orf50 0 52.49 0.065887 723620000.0 1212400.0 1096900.0 707170.0 659660.0 1045300.0 1069800.0 742210.0 964390.0 945040.0 865750.0 False True 1145145.7551405206 1044203.2775195345 752755.3097120061 722353.8880659882 1127559.163056571 1063122.9813778389 817239.8300715517 961044.7561803182 773444.5585197157 858080.1285433077 1.3345440793327084 1.2169064901808095 0.877255264015841 0.8418256804201598 1.3140487998139938 1.2389553679358776 0.952405029421801 1.1199941872699057 0.9013663558818559 1.0 19.71075284903158 -4.55808659991892 8.082685666509086 1.0429211224233006 1.3059605375916592 0.3177681727347593 0.14720025903762615 0.24444304864888128 48.95067155252668 0.03986582605157732 0.10779182020836524 2.7663899620642144e-05 4.55808659991892 0.2630394151683586 EAIEGTYIDKK ddPTM_KYSE-520_SHP099_60min_R1 4 EAIEGTYIDKK 11 1 P62280;M0QZC5 P62280 RPS11 40S ribosomal protein S11 0 ;;; 172.92 2.5092e-05 2600800000.0 1834040.0 1679630.0 1187810.0 1161860.0 1680190.0 1793290.0 1309410.0 1659680.0 1553970.0 1522590.0 False True 1732302.1451319025 1598938.0536239687 1264378.133163196 1272282.825074052 1812411.394026614 1782097.4119228488 1441777.9414101022 1653922.9574522236 1271808.2203958386 1509101.0371570948 1.1479033560239829 1.059530153551622 0.8378353085921154 0.8430733222944631 1.2009874417957511 1.1808999981075061 0.9553886094506843 1.0959656886645246 0.8427588273292305 1.0 20.52525796957295 -7.756062519919313 24.995939617818532 0.921379414714149 1.0347488793898951 0.1223458727980743 0.12662381609660356 292.0519237385072 1357739.1914613047 0.09777713962630089 0.034544719769211925 1.7536280358773906e-08 7.756062519919313 0.11336946467574616 EAILAIHK ddPTM_KYSE-520_SHP099_60min_R1 2 EAILAIHK 8 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 106.04 0.0028647 3433300000.0 5446100.0 4915600.0 3391400.0 3424900.0 5196300.0 5001600.0 3762900.0 4566000.0 4328100.0 4154800.0 False True 5143993.976468814 4679447.197533974 3610015.07043186 3750401.466266265 5605219.247097349 4970383.159150681 4143290.6543650017 4550161.611712417 3542226.1425222014 4117991.7043854846 1.2491511265043784 1.136342065126203 0.8766445708444116 0.9107355564296665 1.3611536033761387 1.2069920281426105 1.0061435164992136 1.1049467649161822 0.8601829233288358 1.0 21.973509493016056 -7.746886481330123 24.49707916256991 0.9300914952492205 1.101811338028463 0.19309053980893254 0.1440032600274507 292.4760748842867 492335.38637270697 0.10531589050914371 0.039395167213752635 1.791073955222966e-08 7.746886481330123 0.17171984277924257 EAIVTSEELGQDLEHVEVLQK ddPTM_KYSE-520_SHP099_60min_R1 3 EAIVTSEELGQDLEHVEVLQK 21 0 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ;; 244.72 2.1909000000000003e-26 777580000.0 628950.0 524410.0 210658.0 591900.0 279523.0 396980.0 419750.0 633960.0 401953.0 364523.0 False True 594060.8897192584 499216.55644454184 224237.3517447173 648153.9980387761 301519.8698316863 394502.3005677461 462182.4263652255 631760.9407273759 328968.4676105515 361293.609814603 1.6442607164408456 1.3817475396277108 0.6206513086677182 1.793981350435107 0.8345563321377606 1.091916075598968 1.279243290802717 1.7486081224950605 0.9105294383129581 1.0 18.462812212544254 -4.522750790749065 24.9996711393659 1.1863054101029564 1.5786326207857935 0.15078626074857093 0.3552129362326353 7.282739118698304 1422368.5296962583 0.08719704892973473 0.23623090831858193 3.0008840088085513e-05 4.522750790749065 0.39232721068283705 EALAEAALES(ph)PRPALVR ddPTM_KYSE-520_SHP099_60min_R1 14 EALAEAALESPRPALVR 17 1 O14745;O14745-2;J3QRP6 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR;EALAEAALES(1)PRPALVR 301.42 2.6511000000000003e-38 84357100000.0 8522950.0 8671650.0 7354740.0 5510800.0 6377940.0 8297100.0 7087600.0 8516530.0 11224910.0 8916870.0 True False 8050164.973420392 8255050.917587982 7828838.308400071 6034544.7751175715 6879847.592485432 8245314.721247035 7804083.776310122 8486988.145203052 9186749.30095398 8837873.469019875 0.9108712635046539 0.9340539832941817 0.8858282861644424 0.6828050657515021 0.7784505646750802 0.9329523386083785 0.8830273259360885 0.9602975393292504 1.0394750878881722 1.0 23.07526784564151 -7.224332925610693 1.4013181449927439 1.0204650629448186 0.8452974143388354 0.4646274040024988 0.07239074243562064 0.44954920395762654 1.5849847123124117 0.06583933251783254 0.02592886257686957 5.965777809551216e-08 7.224332925610693 -0.17516764860598322 EALASLPS(ph)SPGLLQSLLER ddPTM_KYSE-520_SHP099_60min_R1 1 EALASLPSSPGLLQSLLER 19 0 P41229-4;P41229-3;P41229-2;P41229-5;P41229 P41229-4 KDM5C Lysine-specific demethylase 5C 1 EALASLPS(0.616)S(0.384)PGLLQSLLER 116.35 3.8158e-05 49985000.0 67040.0 105170.0 60611.0 65078.0 63299.0 91122.0 64473.0 85225.0 99210.0 87263.0 True False 63321.15755907333 100117.4753366116 64518.08204102887 71262.99355358587 68280.27117795649 90553.27379801031 70990.56003584326 84929.37436666452 81195.96488057765 86489.91770958672 0.7321218384285118 1.1575623840085396 0.7459607287136725 0.823945674140547 0.7894593148674965 1.046980690883155 0.820795786558767 0.9819569334293721 0.9387910987869714 1.0 16.40024434445887 -6.249628915674948 24.812447256559512 0.9480203957945921 0.859701040909586 0.15446532710027827 0.12412293799684355 1637.7138978822575 3440652.592422593 0.04033883722776342 0.04003558186377524 5.628220248933554e-07 6.249628915674948 -0.08831935488500608 EALASLPSS(ph)PGLLQSLLER ddPTM_KYSE-520_SHP099_60min_R1 1 EALASLPSSPGLLQSLLER 19 0 P41229-4;P41229-3;P41229-2;P41229-5;P41229 P41229-4 KDM5C Lysine-specific demethylase 5C 1 EALASLPS(0.001)S(0.999)PGLLQSLLER 314.9 2.0946999999999997e-53 36519000.0 66735.0 88995.0 63321.0 53219.0 57407.0 82761.0 56581.0 67631.0 90413.0 71566.0 True False 63033.07651707573 84719.5466157817 67402.77297718229 58276.91775912423 61924.604298850674 82244.45790036576 62300.75965734562 67396.40384619412 73996.27832625402 70931.98091750543 0.8886411418621426 1.1943772825731647 0.9502451800348332 0.8215887531309868 0.8730138859489852 1.1594834493064117 0.8783169291409189 0.9501553879423836 1.0432005051756894 1.0 16.11414861785069 -9.141554953213731 14.528377183560888 0.9999981285361839 0.9736543651007127 0.00461664753576807 0.11779509476988496 0.0 0.0 0.11485373059682417 0.027856121338055356 7.218468186674573e-10 9.141554953213731 -0.02634376343547118 EALEAYRR ddPTM_KYSE-520_SHP099_60min_R1 1 EALEAYRR 8 1 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 0 127.68 0.0020602 227810000.0 216360.0 199250.0 171690.0 133400.0 195310.0 178830.0 136400.0 130800.0 160130.0 157550.0 False True 204358.0794970332 189677.73091965268 182757.41211371298 146078.29589182738 210679.78583811253 177713.85563637974 150188.6431357159 130346.28532894942 131054.4285488044 156154.22957204527 1.3086938474679484 1.2146819938177889 1.1703647900833434 0.9354744747687469 1.3491775817760394 1.1380662318492465 0.9617968309108335 0.8347278564671297 0.8392627526514707 1.0 17.25261212096453 -6.813824831280723 3.1328549593852233 0.8809355323479953 1.1859916450115966 0.6028735008933632 0.11159317535408536 0.17436382278390022 3.476969390611429 0.0512201117609845 0.03397496410498714 1.5352360814118075e-07 6.813824831280723 0.30505611266360133 EALGLGPPAAQLT(ph)PPPAPVGLR ddPTM_KYSE-520_SHP099_60min_R1 9 EALGLGPPAAQLTPPPAPVGLR 22 0 A0A087WZ13;Q8IY67-2;E9PAU2;Q8IY67 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR;EALGLGPPAAQLT(1)PPPAPVGLR 248.18 1.5559999999999998e-26 9917590000.0 1389724.0 1928268.0 1437475.0 1302747.0 1420483.0 2408269.0 1831432.0 2545844.0 2836719.0 2616982.0 True False 1312633.2393738902 1835631.1108907256 1530136.9385413204 1426559.6831948333 1532266.930657311 2393238.099868972 2016571.0196138588 2537013.061368455 2321642.3374666586 2593797.5754611897 0.5060661833414266 0.7077002184969432 0.5899214931100607 0.5499888259172206 0.5907426798272285 0.9226772831119802 0.7774589037678866 0.9781075768479589 0.8950746039053796 1.0 21.30663446284072 -6.259727598418842 24.98592199929358 0.904720107550342 0.5933815852218256 0.8314427738559865 0.07325946279048239 62.02086554047966 905287.785806284 0.02432728265688215 0.023139295329933512 5.49885669303324e-07 6.259727598418842 -0.31133852232851644 EALGQNEES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 EALGQNEESPK 11 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 EALGQNEES(1)PK 71.806 0.021558 205090000.0 1392800.0 1153100.0 1096700.0 1182400.0 1284600.0 1276500.0 1179300.0 1346800.0 1457900.0 1267700.0 True False 1315538.6075220353 1097703.345161614 1167395.036782042 1294774.9404984775 1385690.711625821 1268532.890006366 1298515.1528588713 1342128.2651454816 1193182.1106682194 1256469.1642556745 1.0470122506359743 0.8736412929097926 0.929107589738265 1.0304868414860744 1.1028449810359624 1.0096012907390672 1.0334636056334137 1.0681744553122807 0.9496310332255977 1.0 20.26094383495476 -5.2681061022479305 23.005966331489294 1.0331954681867064 0.9422924671794968 0.2874635035090187 0.055296193868887206 183.48351005018674 633179.8534076423 0.015020296102441334 0.02293549634446783 5.393788310688919e-06 5.2681061022479305 -0.0909030010072096 EALNSCNKR ddPTM_KYSE-520_SHP099_60min_R1 3 EALNSCNKR 9 1 P19338;H7BY16 P19338 NCL Nucleolin 0 ;; 163.64 0.00030269 8072970000.0 3540770.0 4406420.0 2874310.0 2977960.0 4838610.0 5078680.0 3726370.0 4541420.0 4254580.0 4456290.0 False True 3344356.429749997 4194728.969028733 3059592.6216586065 3260984.423043677 5219381.079075057 5046982.074279307 4103067.8454665504 4525666.873995399 3482055.521233825 4416810.737541158 0.7571880772079003 0.9497189755891469 0.6927153558229856 0.7383120121780609 1.1817081123065487 1.1426756486036271 0.9289661906026636 1.0246458684609252 0.7883642130367325 1.0 22.074573582852153 -5.7417312125637086 24.99998563695645 1.0147684223763804 0.7897312029239495 0.46439836203964036 0.11911210368826959 234.75770503967692 297790.9754128877 0.03664549347968045 0.047243287297303475 1.812461488753081e-06 5.7417312125637086 -0.22503721945243094 EALPWGLEPQDVQSSDEMRS(ph)PEGYLR ddPTM_KYSE-520_SHP099_60min_R1 8 EALPWGLEPQDVQSSDEMRSPEGYLR 26 1 Q9H5H4 Q9H5H4 ZNF768 Zinc finger protein 768 1 EALPWGLEPQDVQS(0.318)S(0.318)DEMRS(0.358)PEGY(0.005)LR;EALPWGLEPQDVQS(0.001)S(0.001)DEMRS(0.998)PEGYLR;EALPWGLEPQDVQSSDEMRS(1)PEGYLR;EALPWGLEPQDVQS(0.001)S(0.001)DEMRS(0.997)PEGYLR;EALPWGLEPQDVQS(0.002)SDEMRS(0.998)PEGYLR;EALPWGLEPQDVQSSDEMRS(1)PEGYLR;EALPWGLEPQDVQS(0.002)S(0.003)DEMRS(0.995)PEGYLR;EALPWGLEPQDVQSSDEMRS(1)PEGYLR 281.44 5.7931e-49 2168526000.0 550502.0 521723.0 503019.0 407144.0 458221.0 515796.0 448688.0 489469.0 624936.0 481137.0 True False 519964.55666147027 496658.64395781147 535444.4095988565 445838.8433476932 494280.3857791493 512576.7258391884 494045.7618128898 487771.1462819235 511463.3757545471 476874.50049892213 1.0903593211997409 1.041487107065256 1.1228203836410975 0.9349186062187046 1.036499928727614 1.074867130246875 1.0360079251375414 1.022850133046747 1.0725324487248467 1.0 18.863250115237232 -5.168902657103262 22.738444241549903 1.0292390709921795 1.080547812183657 0.29655492593014954 0.04154090343507133 39.639961606055486 9736.286606871317 0.011205481459824898 0.019408474827299693 6.777934114067201e-06 5.168902657103262 0.051308741191477436 EALS(ph)PCPSTVSTK ddPTM_KYSE-520_SHP099_60min_R1 5 EALSPCPSTVSTK 13 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 EALS(0.999)PCPS(0.001)TVSTK;EALS(1)PCPSTVSTK;EALS(1)PCPSTVSTK;EALS(0.977)PCPS(0.022)T(0.002)VSTK;EALS(0.981)PCPS(0.019)TVSTK 243.49 5.967399999999999e-16 2439550000.0 3259330.0 3694090.0 2812020.0 2383040.0 2612910.0 3268330.0 2590520.0 3413890.0 3775210.0 3328890.0 True False 3078528.4675867315 3516620.3714578673 2993287.308591084 2609523.4051128984 2818531.1515757656 3247931.140144543 2852395.042638818 3402048.0123979175 3089727.0292995195 3299398.6244372316 0.9330574501623995 1.0658367695893936 0.9072220878135451 0.7909087994961497 0.8542560243251947 0.9844009499453957 0.8645196798932843 1.0311115447525516 0.9364515722396305 1.0 21.653771660278473 -7.265160617890734 24.987976143115382 0.9878361660215327 0.9155088431887735 0.17809378181009827 0.07366091432369737 666.7944749096055 4477449.556405804 0.0415913548221234 0.021199686556473314 5.430494549148123e-08 7.265160617890734 -0.07232732283275922 EAMEDGEIDGNKVTLDWAK ddPTM_KYSE-520_SHP099_60min_R1 2 EAMEDGEIDGNKVTLDWAK 19 1 P19338;H7BY16 P19338 NCL Nucleolin 0 ; 208.86 2.0103e-18 961290000.0 2526400.0 2411500.0 1440780.0 1993550.0 2492300.0 2422700.0 2168120.0 2393200.0 1976800.0 1938120.0 False True 2386255.555746459 2295647.9202647037 1533654.9841295083 2183016.3926173355 2688429.8307527895 2407579.030645062 2387294.728412084 2384898.5477770786 1617862.9510727325 1920949.764634541 1.2422269440244533 1.1950587998335545 0.7983837018357868 1.136425549906378 1.3995315651912745 1.2533274294672156 1.2427679121875759 1.241520518487272 0.8422203333258584 1.0 20.873388360446164 -7.758474006564961 24.998870126641254 0.9211101192499574 1.185107420147499 0.3372460419464829 0.14995765089003657 91.14011373958483 768388.6013530364 0.12185817946588445 0.041531845550179435 1.743917731473851e-08 7.758474006564961 0.2639973008975415 EAMEDGEIDGNKVTLDWAKPK ddPTM_KYSE-520_SHP099_60min_R1 3 EAMEDGEIDGNKVTLDWAKPK 21 2 P19338;H7BY16 P19338 NCL Nucleolin 0 ;; 200.29 9.8658e-14 7343170000.0 6665220.0 5638350.0 4185370.0 4462910.0 6318390.0 5613750.0 4801650.0 4651050.0 4806100.0 4601800.0 False True 6295486.959813339 5367475.202664103 4455165.647028776 4887063.6245771805 6815611.346278585 5578712.503935171 5287047.641588056 4634916.593113232 3933433.3919216185 4561031.632146227 1.380276978445543 1.1768116591943911 0.9767890263309498 1.07148207219899 1.4943135448221938 1.223125151033006 1.15917802549863 1.0161991774944648 0.8623999369350377 1.0 22.120928745084903 -7.306857290091289 2.60096243363434 0.9324727978840693 1.2114828590624762 0.4165943818699327 0.13981463962063942 0.3212333848419168 4.19635283379805 0.10075185620504952 0.04238524184941149 4.933358883386082e-08 7.306857290091289 0.2790100611784069 EAMFDDDADQFPDDLS(ph)LDHSDLVAELLK ddPTM_KYSE-520_SHP099_60min_R1 3 EAMFDDDADQFPDDLSLDHSDLVAELLK 28 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4X8;H7C5M8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 EAMFDDDADQFPDDLS(0.579)LDHS(0.421)DLVAELLK;EAMFDDDADQFPDDLS(0.838)LDHS(0.162)DLVAELLK;EAMFDDDADQFPDDLS(0.716)LDHS(0.284)DLVAELLK 227.88 4.5595e-23 260831000.0 226394.0 229611.0 192244.0 193999.0 206697.0 192484.0 181883.0 215361.0 290183.0 212944.0 True False 213835.47351475 218580.14290686278 204636.35584127574 212436.60663207402 222962.8779549449 191282.63595768565 200269.50864701907 214613.96295663528 237493.08211813975 211057.48182792505 1.0131622516423742 1.0356427121833613 0.9695764114541817 1.00653435638578 1.0564083112520328 0.9063058760155122 0.9488860897634447 1.0168507702162857 1.1252530830049778 1.0 17.687276447085754 -7.534051712469114 24.619288912253488 1.0654350534305153 0.9910625886312514 0.24953763654883454 0.049263960115843226 254.51216312221615 560794.5249454225 0.03342034681491075 0.012657360596935728 2.92380421284606e-08 7.534051712469114 -0.07437246479926385 EAMFDDDADQFPDDLSLDHS(ph)DLVAELLK ddPTM_KYSE-520_SHP099_60min_R1 1 EAMFDDDADQFPDDLSLDHSDLVAELLK 28 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4X8;H7C5M8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 EAMFDDDADQFPDDLS(0.376)LDHS(0.624)DLVAELLK 100.88 0.0016736000000000001 136730000.0 57339.0 65017.0 73813.0 42325.0 46808.0 58211.0 49364.0 58716.0 76831.0 58618.0 True False 54158.291367537306 61893.48572749336 78571.10408497581 46347.55527452476 50491.52329891129 57847.683556725926 54354.194866213205 58512.327900417455 62880.42715189647 58098.69012411392 0.9321774940509175 1.0653163710794988 1.3523730727341268 0.7977383857624728 0.8690647446792391 0.9956796518673351 0.9355494030949493 1.007119571464002 1.082303697683502 1.0 15.82621801697017 -5.282453230877085 24.999889689758504 0.9529075047332273 1.1114918003283076 0.26986150414453813 0.12142795516572014 1101.6008473587833 1310557.2668147138 0.03541581505035998 0.052589813535042725 5.218512993196615e-06 5.282453230877085 0.15858429559508036 EANANGS(ph)SPEPVK ddPTM_KYSE-520_SHP099_60min_R1 5 EANANGSSPEPVK 13 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.5)S(0.5)PEPVK;EANANGS(0.5)S(0.5)PEPVK;EANANGS(0.692)S(0.308)PEPVK;EANANGS(0.5)S(0.5)PEPVK;EANANGS(0.56)S(0.44)PEPVK 276.36 2.7281e-18 4383490000.0 10076450.0 10356290.0 8388250.0 6800890.0 7213660.0 9255680.0 7730710.0 10649760.0 11113240.0 10358990.0 True False 9517489.231594928 9858758.283291781 8928970.016674537 7447244.540837858 7781334.001889084 9197911.867899826 8512205.61125888 10612818.468232678 9095355.757982362 10267217.40777227 0.9269784454345149 0.960217154438428 0.8696582201439818 0.7253420518007444 0.7578814875390313 0.8958524498504356 0.8290664620401582 1.0336606352758042 0.8858637541947043 1.0 23.29154190371101 -7.24836491069831 24.82920739447351 0.9698216481133775 0.850151541540827 0.34983905311133656 0.07553590598843317 856.9420289781759 1627388.8631021169 0.03928505970257758 0.02250425617331823 5.6446249270248063e-08 7.24836491069831 -0.1196701065725505 EANANGSS(ph)PEPVK ddPTM_KYSE-520_SHP099_60min_R1 1 EANANGSSPEPVK 13 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EANANGS(0.14)S(0.86)PEPVK 291.02 3.2538e-30 1657400000.0 3506100.0 3819600.0 2977000.0 2337100.0 2630000.0 3378400.0 3104600.0 3725800.0 4192300.0 3625400.0 True False 3311609.643762932 3636100.682663513 3168902.1833684104 2559217.2813252658 2836966.0373469675 3357314.152446148 3418443.2659761272 3712876.069408257 3431083.999282791 3593281.7765185162 0.9216114542988909 1.0119163786221306 0.8818963778673429 0.712222820389237 0.7895195016116067 0.9343308878211621 0.951342944579262 1.0332827482863352 0.9548608243595978 1.0 21.776870641777087 -6.642520098670208 2.786585332582346 0.990667442077783 0.8646366643142205 0.3532951992329467 0.07701987871240747 0.35266552176294547 5.535348126584139 0.037999020679425746 0.02777839663574251 2.2776128340052982e-07 6.642520098670208 -0.12603077776356253 EANNFLWPFK ddPTM_KYSE-520_SHP099_60min_R1 4 EANNFLWPFK 10 0 P18124;A8MUD9 P18124 RPL7 60S ribosomal protein L7 0 ;;; 155.42 0.0008326000000000001 1557411000.0 2544013.0 2792726.0 1906260.0 1931531.0 3371930.0 3048340.0 2377986.0 2029195.0 2072559.0 1998115.0 False True 2402891.527525818 2658559.2509928104 2029140.569723843 2115103.125504031 3637281.707342717 3029314.179335689 2618376.0317868646 2022156.196162675 1696234.5305606776 1980413.2556099487 1.2133283397892376 1.3424265079330622 1.024604619250989 1.068010991904111 1.8366276316517929 1.5296373980301847 1.3221361876718147 1.0210778939367733 0.8565053408705111 1.0 20.917370080239984 -9.446461143113682 7.817373765498175 1.0000331144213805 1.2584584106910806 0.0678144491445386 0.27015430987448996 0.0 0.0 0.284921962390177 0.06910372623488015 3.5771640449189923e-10 9.446461143113682 0.2584252962697 EAPEEDPRLPDNFRPPGEDFRS(ph)PPDDFR ddPTM_KYSE-520_SHP099_60min_R1 1 EAPEEDPRLPDNFRPPGEDFRSPPDDFR 28 3 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 EAPEEDPRLPDNFRPPGEDFRS(1)PPDDFR 61.583 0.022291 231410000.0 154410.0 140160.0 131870.0 128560.0 160290.0 129970.0 116760.0 122540.0 201880.0 110790.0 True False 145844.5694912963 133426.50321555085 140370.55119946023 140778.30374702657 172903.91107465597 129158.80902007654 128563.24026778736 122114.93734105102 165223.68098065723 109808.4867933158 1.328172109008373 1.2150837072064335 1.278321515017952 1.2820348213340096 1.57459515310597 1.1762188223500647 1.1707951181384753 1.112071943682265 1.504653108385377 1.0 16.744630034986397 EAPFQSGS(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 1 EAPFQSGSLK 10 0 Q8NHQ8;H0YG85 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 1 EAPFQS(0.001)GS(0.999)LK 97.69 0.0035466 0.0 171640.0 155630.0 147870.0 148800.0 147480.0 166180.0 139420.0 175800.0 189630.0 181250.0 True False 162118.78704414272 148153.30119460763 157401.9368003651 162941.9072616485 159085.83695358588 165142.8089786589 153513.9342080757 175190.19083202857 155197.9721832872 179644.26601036635 0.902443426915656 0.8247037575140777 0.8761868123933454 0.9070253723113321 0.8855603381429711 0.9192768166011452 0.854544025352956 0.975206137789665 0.8639183182965134 1.0 17.45478336173665 -13.99999999999059 0.12608622431823574 1.3690987824886522 0.8409407893415305 0.452214368648467 0.03765795308178175 124.47740818338525 0.9995229416909932 11.597795385099907 0.2944802736465432 1.0000000000216659e-14 13.99999999999059 -0.5281579931471218 EAPGS(ph)PPLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 2 EAPGS(1)PPLS(1)PR;EAPGS(1)PPLS(1)PR 92.15100000000001 0.006790999999999999 826690000.0 2393010.0 2216110.0 2281050.0 2218720.0 2203540.0 2213380.0 2149730.0 2282770.0 2814200.0 2374160.0 True False 2260264.964952834 2109644.7491510715 2428090.1328090434 2429586.4817175088 2376946.061572445 2199565.474408378 2367045.6877429816 2274851.603672521 2303212.220208864 2353126.78946853 0.9605368376530745 0.8965282952847388 1.0318569078708437 1.0324928059937848 1.010122392133955 0.9347415890433872 1.005915065153627 0.9667356701107942 0.9787879813858481 1.0 21.166147626226994 -4.7583243629835925 24.999998983944373 0.9939987412800759 0.9285325678252387 0.4171496514443216 0.03144460024626856 78.52937120380959 630218.143834032 0.008466508720969008 0.0205208509627727 1.744518731650349e-05 4.7583243629835925 -0.06546617345483718 EAPGS(ph)PPLSPR ddPTM_KYSE-520_SHP099_60min_R1 3 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAPGS(0.994)PPLS(0.006)PR;EAPGS(0.997)PPLS(0.003)PR;EAPGS(0.963)PPLS(0.037)PR 127.52 0.00017117 1830770000.0 4097200.0 3893350.0 3417880.0 2789600.0 3114700.0 3721700.0 2935590.0 3266270.0 3971500.0 3580000.0 True False 3869920.148434289 3706307.6219625054 3638202.0136013543 3054722.7452761736 3359809.1697812136 3698471.4898054847 3232348.085797484 3254940.0717231478 3250375.7133677453 3548283.9851978524 1.090645552773731 1.0445352281339009 1.0253412716621915 0.8609014267232734 0.9468828266838598 1.042326799442818 0.9109609318988171 0.9173279493134066 0.9160415927606494 1.0 21.75869004898597 -5.052386431131409 6.461637329292161 0.9414631085572446 1.0602659090913429 0.5362449834246904 0.048446958339468785 0.16931491490318157 16.47244146423198 0.013592113813410934 0.02426105897600465 8.863669800795035e-06 5.052386431131409 0.11880280053409831 EAPGSPPLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 EAPGSPPLSPR 11 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;E9PNR0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 EAPGS(0.426)PPLS(0.574)PR 151.13 5.2543e-05 735000000.0 1009800.0 1089800.0 992940.0 745130.0 725220.0 885780.0 818190.0 839600.0 1047700.0 802760.0 True False 953784.381013606 1037444.3721768513 1056946.501160173 815946.931168496 782290.6880626497 880251.518456592 900900.6299648928 836687.6235641125 857464.0903677163 795648.1709378302 1.198751427894795 1.303898393876801 1.3284093896858338 1.0255122313757594 0.9832118223065403 1.1063326110824083 1.132285176880381 1.0515798994144725 1.0776925300500895 1.0 19.601771098357755 -5.263916221122201 24.999774855481245 1.0584688423664363 1.279707608854926 0.7895934439683564 0.05275995944972046 97.94872666344455 988639.1332748762 0.015481704611429377 0.024214697083908235 5.44607701889598e-06 5.263916221122201 0.2212387664884896 EAPS(ph)PTLR ddPTM_KYSE-520_SHP099_60min_R1 4 EAPSPTLR 8 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 EAPS(0.999)PT(0.001)LR;EAPS(0.996)PT(0.004)LR;EAPS(0.999)PT(0.001)LR;EAPS(0.988)PT(0.012)LR 132.88 0.00076962 2114050000.0 5154730.0 4989340.0 4436360.0 3631130.0 4385850.0 5005070.0 4204920.0 4827690.0 5683900.0 4855720.0 True False 4868786.851200498 4749644.617247981 4722334.864026973 3976231.5034609535 4730991.442927064 4973831.5015935525 4629994.349664481 4810943.870181319 4651847.039458867 4812702.098492989 1.0116534852063814 0.986897696978844 0.9812231813611915 0.8261952271481833 0.9830218754675235 1.0334800284337187 0.9620363477544726 0.9996346691991967 0.9665769757316808 1.0 22.198415693992413 -5.977995611580053 24.999934965091942 0.9924087896723031 0.9497029511648248 0.13158718961337756 0.04985524535167568 505.17802455039487 573947.176871775 0.016218953823990113 0.018389177732159333 1.051972503646964e-06 5.977995611580053 -0.04270583850747822 EAPS(ph)PTLRR ddPTM_KYSE-520_SHP099_60min_R1 3 EAPSPTLRR 9 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 EAPS(1)PTLRR;EAPS(0.962)PT(0.038)LRR;EAPS(0.999)PT(0.001)LRR 122.77 0.00046551 905620000.0 1075280.0 1019790.0 916700.0 859340.0 934820.0 916290.0 834990.0 879780.0 1195570.0 966170.0 True False 1015632.0748824626 970797.7576640033 975791.948771859 941011.4152300073 1008385.0156017826 910571.0942294813 919398.937917094 876728.2485221956 978484.6258670705 957610.4854688862 1.0605899687754219 1.0137710190053528 1.0189862826053648 0.9826661565524198 1.053022111707596 0.9508783665663681 0.9600969829261192 0.9155374359679371 1.0217981535446152 1.0 19.869079423764116 -6.272325919569115 24.96315427214991 0.9637854502053029 1.0223627822702634 0.40477468680982265 0.0335371298183253 687.9735371527215 1577537.5698809458 0.01135094965249428 0.010111041701340235 5.341633420341936e-07 6.272325919569115 0.05857733206496052 EAPSPT(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 EAPSPTLR 8 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 EAPS(0.208)PT(0.792)LR 121.64 0.004384300000000001 934460000.0 1000200.0 934970.0 862090.0 739550.0 726020.0 910960.0 791310.0 986310.0 1020900.0 860610.0 True False 944716.9121507328 890052.6377814194 917661.7007927701 809836.6096461839 783153.6435112723 905274.3607365453 871303.337241374 982888.7208164834 835530.2947946951 852985.6649444489 1.1075413702436112 1.0434555636282405 1.075823121661175 0.9494140909143238 0.918132245003526 1.0613007907882037 1.0214747715579933 1.1522921910774369 0.9795361506445825 1.0 19.70216197062594 -9.85977831557697 13.966548167960271 0.9999999921558096 1.0337883429761192 0.022633014363546478 0.06759456740587334 0.0 0.0 0.06782366674866278 0.016449655407142882 1.3810890578162592e-10 9.85977831557697 0.03378835082030962 EAQGQQFHHHR ddPTM_KYSE-520_SHP099_60min_R1 1 EAQGQQFHHHR 11 0 A6ND36 A6ND36 FAM83G Protein FAM83G 0 141.08 0.00010267 277320000.0 184680.0 147170.0 128460.0 152680.0 216640.0 164130.0 165630.0 173990.0 148990.0 94381.0 False True 174435.43224954733 140099.73229332632 136740.73714326715 167190.66129508414 233688.3354870141 163105.6037890677 182373.49679302523 173386.4692995712 121937.17173225748 93544.857767307 1.864724971664993 1.4976743311943952 1.4617664766075116 1.787277946490348 2.4981419723606213 1.7436084428584326 1.9495833458497487 1.8535114963867962 1.3035154966569773 1.0 16.513370729140505 -7.907690279271398 3.2684570819403342 1.0070169818315027 1.8314539011237922 0.5198519261110843 0.26875133633447806 0.19087348876566487 3.9738098676381215 0.27981942322680303 0.07493500277045355 1.2368291740283663e-08 7.907690279271398 0.8244369192922896 EAQQKVPDEEENEES(ph)DNEKETEK ddPTM_KYSE-520_SHP099_60min_R1 11 EAQQKVPDEEENEESDNEKETEK 23 2 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(0.999)DNEKET(0.001)EK;EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK;EAQQKVPDEEENEES(1)DNEKETEK 318.57 6.348699999999998e-61 18900340000.0 11903800.0 14201980.0 12961120.0 10127400.0 11346590.0 10643570.0 9772600.0 9403330.0 14842170.0 10247610.0 True False 11243472.484363 13519695.563193407 13796614.533725232 11089905.051086158 12239502.079734113 10577139.531598175 10760509.779384892 9370712.042983722 12147206.068658024 10156824.14791995 1.106987018837536 1.331094775915969 1.3583591024907808 1.0918673878347394 1.2050520813871413 1.0413825598983422 1.0594364559898946 0.9226025681366928 1.1959649878496412 1.0 23.275946032631463 -5.922304574436507 1.2845109976906102 1.0362556527488054 1.2598668217396778 0.4330788905808466 0.10025286771960226 0.39036624914260337 1.348165458206086 0.04152455981612323 0.05067627168606308 1.1959015411617516e-06 5.922304574436507 0.2236111689908724 EAQSFISAAIEPESGKS(ph)NER ddPTM_KYSE-520_SHP099_60min_R1 2 EAQSFISAAIEPESGKSNER 20 1 Q8WXA9;Q8WXA9-2 Q8WXA9 SREK1 Splicing regulatory glutamine/lysine-rich protein 1 1 EAQSFISAAIEPES(0.249)GKS(0.751)NER;EAQSFISAAIEPES(0.286)GKS(0.714)NER 153.87 4.037e-07 1045930000.0 332610.0 388040.0 408100.0 400300.0 370740.0 386860.0 295120.0 375480.0 503820.0 341140.0 True False 314159.460258403 369397.97594008554 434406.7789830871 438344.39164541627 399915.1287779517 384445.4632415693 324953.6096936396 374177.5475176911 412338.98826864857 338117.76500290417 0.9291421296828476 1.092512769735458 1.2847795175132424 1.296425201561507 1.1827687574313546 1.1370164570863859 0.961066360091575 1.1066485888858197 1.219512935870456 1.0 18.367166293117915 -6.53494141272454 24.856410145285693 1.0761725004811085 1.1675194082275338 0.10604446387513855 0.11557501804060501 514.3547242027677 1059872.7147016528 0.047419899662468484 0.0367607931175461 2.917820607833838e-07 6.53494141272454 0.09134690774642529 EAQSSQATPVQTSQPDSSNIVKVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 EAQSSQATPVQTSQPDSSNIVKVSPR 26 1 H7C5E4;Q8IZH2-2;Q8IZH2 H7C5E4 XRN1 5-3 exoribonuclease 1 1 EAQSSQATPVQTSQPDS(0.017)S(0.017)NIVKVS(0.967)PR;EAQSSQATPVQTSQPDSSNIVKVS(1)PR;EAQSSQATPVQTSQPDSSNIVKVS(1)PR 211.15 1.3451e-21 3255310000.0 1642180.0 1895650.0 1476630.0 1237320.0 1274170.0 1695350.0 1206050.0 1622430.0 2027350.0 1673310.0 True False 1551085.00179533 1804580.128571341 1571815.9324915342 1354914.5207861788 1374439.929964404 1684768.6917918501 1327969.303913711 1616802.1690080073 1659234.3453345306 1658485.7752154805 0.9352416674142434 1.0880889999414551 0.9477415820990773 0.8169587831467171 0.8287318170008594 1.0158475381393939 0.8007119046536129 0.9748664674545928 1.0004513575758303 1.0 20.66143520754954 -10.156868907958097 13.713228648711862 1.0000003904828916 0.9323196307531729 0.046309100691470206 0.08904981862533369 0.0 0.0 0.08989142190090407 0.021801872196140486 6.968368229684667e-11 10.156868907958097 -0.06768075972971865 EAREFK ddPTM_KYSE-520_SHP099_60min_R1 2 EAREFK 6 1 A0A6E1W0W4;A0A3B3IRX4;A0A1B0GUT5;A0A6E2AE84;Q8IYJ2-2;Q8IYJ2 A0A6E1W0W4 C10orf67 Uncharacterized protein C10orf67 0 ; 67.035 0.050683 740820000.0 1385350.0 1026390.0 787000.0 703500.0 954930.0 1046430.0 735820.0 986760.0 987890.0 952900.0 False True 1308501.873873242 977080.6837572012 837731.2792445212 770360.4284850119 1030077.5581915354 1039898.8422165012 810203.8665111619 983337.1598715156 808514.0786803125 944458.0473449819 1.3854526175637378 1.034541117526529 0.8869968143100837 0.8156639997410309 1.090654646955726 1.1010535037949205 0.8578505617997227 1.041165526235738 0.8560614004541239 1.0 19.849127188221892 -4.282609890291977 3.398093897491484 0.9590192319263904 1.4307310367718835 0.6385103975428186 0.09640178019383339 0.18211980926407667 3.6086971277912454 0.025021370598511995 0.21636009937056733 5.216630902141638e-05 4.282609890291977 0.47171180484549313 EAS(ph)PAPLAQGEPGREDLPTR ddPTM_KYSE-520_SHP099_60min_R1 5 EASPAPLAQGEPGREDLPTR 20 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 EAS(1)PAPLAQGEPGREDLPTR;EAS(1)PAPLAQGEPGREDLPTR;EAS(1)PAPLAQGEPGREDLPTR;EAS(1)PAPLAQGEPGREDLPTR;EAS(1)PAPLAQGEPGREDLPTR 247.64 1.0764e-26 4876420000.0 3754590.0 3388160.0 3075030.0 2942310.0 3190950.0 3365410.0 3168610.0 3395150.0 3901800.0 3437730.0 True False 3546315.4081103993 3225387.7078681574 3273251.354021956 3221946.257762242 3442059.610978059 3344405.2278545424 3488924.0214535245 3383373.017083968 3193331.4763737246 3407274.3867134685 1.0408071102048946 0.9466181298592884 0.9606656178867984 0.9456080996370865 1.0102091056711588 0.9815485482753952 1.023963328300898 0.9929851937599441 0.9372099555075442 1.0 21.70018670120554 -5.772607673734347 24.9995712910352 0.9918122686997954 0.970598611641883 0.06144657156357125 0.032794503434394065 574.5452969374811 1286082.2322894477 0.010124704068621152 0.011589890892815816 1.68807728608418e-06 5.772607673734347 -0.02121365705791245 EAS(ph)RESS(ph)RDTS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 EASRESSRDTSPVR 14 2 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4M5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 3 EAS(0.574)RES(0.546)S(0.778)RDT(0.115)S(0.987)PVR 56.303999999999995 0.032625 597800000.0 176580.0 167040.0 156060.0 165130.0 155280.0 156180.0 149920.0 156080.0 216950.0 156610.0 True False 166784.75539649712 159015.1476678483 166119.8773048286 180823.90555185525 167499.65257765652 155205.2226879705 165075.3766782005 155538.59490934582 177557.34886444217 155222.55724073626 1.0744878731628478 1.024433242787194 1.0702044874005754 1.1649331692906824 1.0790935000373663 0.9998883245252886 1.0634754356107108 1.0020360292616453 1.1438888266031249 1.0 17.243978702416815 -6.0361913449001605 24.466758272361208 1.0429088299881202 1.0838025474542703 0.1364641807739947 0.05134298874754226 999.1955538124002 675492.7229022997 0.017062025294632032 0.017068663939994327 9.200441221204012e-07 6.0361913449001605 0.040893717466150115 EASGGDS(ph)PKDDSKPPYSYAQLIVQAITMAPDK ddPTM_KYSE-520_SHP099_60min_R1 1 EASGGDSPKDDSKPPYSYAQLIVQAITMAPDK 32 2 E9PPI7;Q01167-3;Q01167-2;Q01167;E9PM37 E9PPI7 FOXK2 Forkhead box protein K2 1 EAS(0.128)GGDS(0.711)PKDDS(0.112)KPPY(0.016)S(0.018)Y(0.016)AQLIVQAITMAPDK 126.64 6.2333e-05 169740000.0 170080.0 190110.0 186230.0 187270.0 179190.0 186700.0 157500.0 202020.0 237450.0 132400.0 True False 160645.32335392555 180976.83023907224 198234.68377853543 205068.08449522153 193291.23354836614 185534.73604715127 173421.63705187128 201319.23977182255 194335.065627388 131227.03900564119 1.2241785273156984 1.3791123507045862 1.5106237653507806 1.5626968805293706 1.4729527924504717 1.413845328318164 1.3215389020887398 1.5341292564192373 1.4809071903164248 1.0 17.001705488754205 -10.133411322375455 5.606506797604153 0.999993932338521 1.438083948715964 0.6363308315458975 0.09821823276638988 7.864251055911296e-06 1.2154884248207942e-06 0.10039883419944134 0.02434995670999372 7.355101623282964e-11 10.133411322375455 0.43809001637744305 EASRPPEEPSAPS(ph)PTLPAQFK ddPTM_KYSE-520_SHP099_60min_R1 8 EASRPPEEPSAPSPTLPAQFK 21 1 H0Y3X6;A0A0C4DFX9;Q9H3P2;Q9H3P2-7 H0Y3X6 NELFA Negative elongation factor A 1 EASRPPEEPSAPS(0.947)PT(0.053)LPAQFK;EASRPPEEPS(0.001)APS(0.998)PT(0.001)LPAQFK;EASRPPEEPS(0.012)APS(0.947)PT(0.042)LPAQFK;EASRPPEEPS(0.003)APS(0.994)PT(0.003)LPAQFK;EASRPPEEPSAPS(0.967)PT(0.032)LPAQFK;EASRPPEEPSAPS(0.915)PT(0.085)LPAQFK;EAS(0.001)RPPEEPS(0.042)APS(0.921)PT(0.036)LPAQFK;EASRPPEEPS(0.003)APS(0.948)PT(0.049)LPAQFK 183.49 3.1785e-13 30628070000.0 14541620.0 15158190.0 11688290.0 9977814.0 11037374.0 14544420.0 12378860.0 15050930.0 18380200.0 15546680.0 True False 13734967.350599192 14429967.799492931 12441735.87532522 10926102.442620829 11905952.539732497 14453642.879801322 13630235.97483129 14998721.836743487 15042819.00713628 15408948.510334026 0.8913630505928307 0.9364667413753417 0.8074357485834389 0.7090751478138322 0.7726648273078308 0.9380031914642308 0.8845662613312102 0.9733773739775028 0.976239163694252 1.0 23.877265081503303 -6.880961421928616 1.4000429435068984 0.984079431615336 0.8277980980928129 0.504103908411749 0.0646523418142679 0.4178030199379894 1.6225641317506834 0.048298043751307966 0.025382705135284882 1.3153416678721544e-07 6.880961421928616 -0.15628133352252305 EASRPPEEPSAPSPT(ph)LPAQFK ddPTM_KYSE-520_SHP099_60min_R1 2 EASRPPEEPSAPSPTLPAQFK 21 1 H0Y3X6;A0A0C4DFX9;Q9H3P2;Q9H3P2-7 H0Y3X6 NELFA Negative elongation factor A 1 EASRPPEEPSAPS(0.371)PT(0.629)LPAQFK;EASRPPEEPS(0.003)APS(0.397)PT(0.601)LPAQFK 107.58 0.00053295 2285440000.0 2115780.0 2134900.0 1730260.0 1495820.0 1544980.0 2067770.0 1661940.0 2048690.0 2734500.0 2394400.0 True False 1998413.465697137 2032336.199449768 1841795.3281138819 1637982.2830653181 1666561.136266279 2054864.280429663 1829945.114171347 2041583.572557843 2237983.7311353623 2373187.4788150103 0.8420798961466766 0.8563740612960602 0.7760850520893253 0.6902034911642135 0.7022458828657031 0.8658668136306307 0.7710916775463028 0.8602706658376839 0.943028627579327 1.0 21.17839464544509 -7.709261164712631 1.4901791441662888 1.0007791324573305 0.7821202585646445 0.6396133392322887 0.055980052122942055 0.26420513744162866 1.13330408048635 0.05760101193258671 0.017867132662858037 1.9531645592766308e-08 7.709261164712631 -0.218658873892686 EATAQKPTGSVGS(ph)TVTTPPPLVR ddPTM_KYSE-520_SHP099_60min_R1 1 EATAQKPTGSVGSTVTTPPPLVR 23 1 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 EATAQKPTGSVGS(0.515)T(0.076)VT(0.103)T(0.305)PPPLVR 117.73 0.00011686 3979800000.0 856500.0 1141300.0 941440.0 790950.0 829420.0 1093900.0 996870.0 1189300.0 1097100.0 1252100.0 True False 808988.2376095795 1086470.2348737742 1002126.7287572578 866121.6501922103 894690.6352457491 1087072.5643383993 1097643.3481136463 1185174.5958847064 897894.2956403749 1241007.368119061 0.651880285639018 0.875474443411636 0.8075107001791103 0.6979182174437465 0.7209390195658479 0.8759597986803465 0.8844777044130647 0.9550101202711005 0.7235205194641776 1.0 20.243080250398627 -6.297469150995416 9.381946885423702 0.8849186781743962 0.7579133059126001 0.3780072584138364 0.08762145506703468 0.5714496791965767 144.5715140977805 0.030185184953020867 0.02675501028022604 5.041164264598468e-07 6.297469150995416 -0.1270053722617961 EATAQKPTGSVGST(ph)VTTPPPLVR ddPTM_KYSE-520_SHP099_60min_R1 1 EATAQKPTGSVGSTVTTPPPLVR 23 1 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 EATAQKPTGSVGS(0.198)T(0.575)VT(0.142)T(0.084)PPPLVR 103.12 0.0035159999999999996 5334600000.0 1980500.0 2421700.0 1933200.0 1774200.0 1531500.0 2153900.0 1688700.0 2412500.0 2806000.0 2735100.0 True False 1870637.716971132 2305357.896954193 2057817.1652293622 1942819.434567318 1652020.3369569858 2140456.71115136 1859410.2761237803 2404131.6005817326 2296501.133503685 2710869.1418755995 0.6900509095311302 0.8504128293552226 0.7590986718767241 0.7166776900278993 0.609406153708321 0.7895831923743903 0.6859092707209353 0.8868490047875786 0.8471456987830769 1.0 21.370324042911594 -7.782674129370891 1.1773950161331959 0.9890405685847568 0.7309420998742621 0.6024308821311197 0.06899758166043335 0.30908635348688135 0.8954375381741954 0.06567879722767916 0.02139271589060627 1.649399545780738e-08 7.782674129370891 -0.2580984687104947 EATAQKPTGSVGSTVT(ph)TPPPLVR ddPTM_KYSE-520_SHP099_60min_R1 1 EATAQKPTGSVGSTVTTPPPLVR 23 1 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 EATAQKPTGSVGS(0.027)T(0.086)VT(0.444)T(0.444)PPPLVR 70.465 0.048021 1175500000.0 544790.0 708620.0 523590.0 425300.0 488070.0 642730.0 438570.0 639170.0 637010.0 696160.0 True False 514569.4126880603 674576.831539695 557341.4491736207 465720.3841288928 526478.3322615712 638718.4836614119 482904.93563072593 636952.8684533993 521345.04171531857 689992.5640042847 0.7457608089307829 0.977658117972857 0.8077499356502627 0.6749643524071381 0.7630202986626706 0.9256889377976625 0.69986976791206 0.9231300476006926 0.7555806669708997 1.0 19.396221288600156 -10.114032884903883 5.195841708332549 1.0000031490726975 0.8115397135357851 0.25990305682062254 0.0969678057884171 5.170161955561271e-06 8.816098641234083e-07 0.0919940945486622 0.022311289068544255 7.690722037119066e-11 10.114032884903883 -0.18846343553691236 EATAQKPTGSVGSTVTT(ph)PPPLVR ddPTM_KYSE-520_SHP099_60min_R1 1 EATAQKPTGSVGSTVTTPPPLVR 23 1 Q86YP4-2;Q86YP4;Q86YP4-3 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 EATAQKPTGSVGS(0.005)T(0.019)VT(0.061)T(0.916)PPPLVR 86.32 0.010838 1224700000.0 1360300.0 1668800.0 1426400.0 1071900.0 1222900.0 1614500.0 1152400.0 1544700.0 1824600.0 1779500.0 True False 1284841.4473091783 1588628.343080133 1518348.0263206956 1173773.0537215134 1319135.272650799 1604423.3066316324 1268895.8383401677 1539341.7962356915 1493298.6344229602 1763735.0144300503 0.728477598277071 0.900718265545971 0.8608708303108382 0.665504196559151 0.7479214631780028 0.909673671784591 0.7194367793113244 0.8727738484758317 0.8466683612932177 1.0 20.750202394344136 -8.292879256037947 0.927292861315189 0.9998776232575517 0.7948010485313662 0.38260425478323956 0.07834090824090119 1.1334983970290897 1.8500292684176771 0.07695485126531068 0.025696031341668667 5.094724965664903e-09 8.292879256037947 -0.20507657472618546 EATDAIGHLDR ddPTM_KYSE-520_SHP099_60min_R1 2 EATDAIGHLDR 11 0 Q12906;Q12906-5;Q12906-2;Q12906-3;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 0 ; 159.99 3.6905e-05 727780000.0 940830.0 927900.0 618840.0 563140.0 862420.0 916220.0 643680.0 789960.0 730830.0 776860.0 False True 888640.2844018937 883322.2911937055 658731.4165790088 616660.6562857856 930287.547501433 910501.5311254464 708749.4561114204 787219.8131380505 598129.6947250528 769977.6247879346 1.154111828440003 1.1472051430546284 0.8555202065260469 0.8008812677584297 1.2082007548695335 1.1825038829877876 0.9204805870905957 1.0223931031175935 0.776814384560575 1.0 19.554456996768362 -7.231251599273417 2.1518061239242114 0.9083540510204957 1.0444872398242655 0.13214900382151562 0.14395038536409965 0.7681967656481715 6.746843561742789 0.10502730206869104 0.045056168761922144 5.8714910163361723e-08 7.231251599273417 0.1361331888037698 EATGLS(ph)PQAAQEK ddPTM_KYSE-520_SHP099_60min_R1 2 EATGLSPQAAQEK 13 0 P17029;C9JRM9 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 EAT(0.001)GLS(0.999)PQAAQEK;EATGLS(1)PQAAQEK 202.34 3.2255e-08 0.0 668230.0 881480.0 646550.0 571380.0 679360.0 704770.0 596510.0 683310.0 925540.0 692110.0 True False 631161.9498165197 839132.3776715461 688227.6475165762 625683.7834083387 732821.7669703561 700371.2690088428 656811.0521765827 680939.7570957537 757485.2669647182 685978.4438534317 0.9200900632839357 1.2232634788897794 1.0032788255714127 0.9121041470248068 1.068286873350984 1.0209814539864555 0.9574806002459736 0.9926547447622791 1.1042406270226253 1.0 19.387803716382457 -4.907529887509074 23.167679059330244 1.0045547391027871 1.0820768619760575 0.08150169949519115 0.08448140315141506 19.855923906049288 4963.366068753665 0.020899278192702635 0.043505325141464116 1.2372860387954802e-05 4.907529887509074 0.07752212287327032 EATGLS(ph)PQAAQEKDGIVIVK ddPTM_KYSE-520_SHP099_60min_R1 2 EATGLSPQAAQEKDGIVIVK 20 1 P17029;C9JRM9 P17029 ZKSCAN1 Zinc finger protein with KRAB and SCAN domains 1 1 EAT(0.002)GLS(0.998)PQAAQEKDGIVIVK;EATGLS(1)PQAAQEKDGIVIVK 192.75 3.2946e-13 673920000.0 656130.0 1055910.0 811740.0 689440.0 713580.0 689600.0 551850.0 568180.0 1143890.0 659060.0 True False 619733.1609372722 1005182.4986467783 864066.0592299224 754964.1703123047 769734.6862851884 685295.950605868 607636.3835369861 566209.1161942085 936188.4111202895 653221.241140921 0.9487339386803187 1.5388086536976648 1.3227770390943476 1.1557556961768096 1.1783675082897858 1.049102367536189 0.93021528582825 0.8667953222177275 1.4331873370883286 1.0 19.317212178977606 -5.819849442137823 1.6852393046146001 1.0427582577018812 1.2866951794268058 0.16367708716859541 0.19681541260241847 0.5634247580875668 3.3098351339027894 0.07087798099039008 0.09036512380647728 1.5140860491405443e-06 5.819849442137823 0.24393692172492454 EATTDFTVDSRPLTQVGGDHIK ddPTM_KYSE-520_SHP099_60min_R1 2 EATTDFTVDSRPLTQVGGDHIK 22 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 ; 211.06 2.4434e-19 1876480000.0 705030.0 603420.0 474350.0 487920.0 710540.0 659920.0 458300.0 620990.0 623240.0 503360.0 False True 665920.5804575392 574430.7974481145 504927.3599868342 534291.770101503 766455.4555804229 655801.194495106 504629.4365769694 618835.9306301556 510075.3266018663 498900.6220081541 1.3347760076487845 1.1513932276450958 1.0120800370110214 1.0709382721370317 1.5362888354304274 1.3144926375425274 1.0114828771825457 1.2403991964155965 1.0223986583715454 1.0 18.928392942475313 -7.771612798649515 21.66820715860471 1.0111980166655994 1.2037409585674184 0.20924769935628473 0.15352290104007793 78.52198685482317 167209.86061022666 0.14911010566830304 0.04083172189498292 1.691948740073461e-08 7.771612798649515 0.19254294190181898 EAVELPLTHFELYK ddPTM_KYSE-520_SHP099_60min_R1 1 EAVELPLTHFELYK 14 0 P43686;P43686-2 P43686 PSMC4 26S protease regulatory subunit 6B 0 188.4 1.7616e-10 387730000.0 784370.0 826000.0 539000.0 558060.0 849150.0 909320.0 621500.0 646300.0 668400.0 625660.0 False True 740859.4324971709 786317.7201487236 573744.8024304922 611097.854613143 915973.2739974048 903644.5965848719 684327.2852554804 644058.1361475541 547035.4089928231 620117.1391561149 1.1947088472758032 1.2680148160697227 0.9252200369937713 0.9854555148157238 1.47709717432404 1.4572159669939049 1.1035451885538041 1.038607217055828 0.8821485078403979 1.0 19.24218123851224 -7.2490590281701355 2.8743448810208454 0.9551781685711049 1.2103745717165955 0.2946170381708121 0.1681610068989071 0.3984730045295529 6.558572959904791 0.11436436906406099 0.05277256355342568 5.635610528758551e-08 7.2490590281701355 0.2551964031454905 EAVGDLLDAFK ddPTM_KYSE-520_SHP099_60min_R1 2 EAVGDLLDAFK 11 0 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13;C9J2Z7;C9K073 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ; 177.78 4.4857e-05 218370000.0 664850.0 950510.0 741610.0 494140.0 891550.0 964580.0 715830.0 806630.0 871270.0 883280.0 False True 627969.4451543832 904846.0728554036 789415.3672179541 541102.9170313914 961709.9127744063 958559.6984272158 788193.0822275621 803831.9887988574 713069.3309293493 875454.8263814416 0.7173065088349546 1.033572544908395 0.9017202754834097 0.6180820537228146 1.0985260276072575 1.0949276530798002 0.900324104083631 0.918187854559411 0.8145129930652301 1.0 19.739673211705718 -5.791958518374087 24.99999465634065 0.9696436820196681 0.8390948684799987 0.24303021115283352 0.13044902256046986 361.6413436401581 296239.53632997035 0.04230630192388914 0.04797628139246608 1.6145127596054174e-06 5.791958518374087 -0.1305488135396694 EAVIT(ph)PVASATQSVSR ddPTM_KYSE-520_SHP099_60min_R1 6 EAVITPVASATQSVSR 16 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 EAVIT(0.997)PVAS(0.003)ATQSVSR;EAVIT(1)PVASATQSVSR;EAVIT(1)PVASATQSVSR;EAVIT(0.999)PVAS(0.001)ATQSVSR;EAVIT(1)PVASATQSVSR;EAVIT(1)PVASATQSVSR 289.5 1.0802e-36 7863500000.0 4007650.0 5675760.0 4216130.0 3519210.0 3684830.0 5407880.0 3740650.0 4882920.0 5255980.0 5446370.0 True False 3785337.6654477892 5403087.970110558 4487908.485846514 3853674.6603109343 3974805.157185253 5374127.414968766 4118791.4072259273 4865982.290202098 4301626.524473523 5398119.39901174 0.7012326674620775 1.0009204263061924 0.8313837012697676 0.7138920752691104 0.7363314634931825 0.9955554921502169 0.7630048731378514 0.9014217601583501 0.7968750237834759 1.0 22.364025456921283 -6.232118004425884 24.930230470934433 0.8771874543055911 0.8054154161748979 0.15781858885501943 0.10586250575096602 1743.4331997591414 1482339.2332855824 0.03494575080389084 0.03494064590714382 5.859789234817906e-07 6.232118004425884 -0.07177203813069322 EAVSGPMAGKPFRPQS(ph)LSK ddPTM_KYSE-520_SHP099_60min_R1 1 EAVSGPMAGKPFRPQSLSK 19 2 A0A096LP25;Q6ZSR9 A0A096LP25 AAK1 Uncharacterized protein FLJ45252 1 EAVSGPMAGKPFRPQS(0.988)LS(0.012)K 111.11 3.6447e-05 462010000.0 146620.0 92366.0 127580.0 131820.0 106300.0 131640.0 134140.0 150850.0 169530.0 172830.0 True False 138486.69632027636 87928.59871580737 135804.01093521752 144348.1331668719 114665.20523573487 130818.38593062134 147700.18028024145 150326.73655865478 138747.6255035211 171298.86065970524 0.8084507730345499 0.5133052162587494 0.7927899252348197 0.8426683785925905 0.6693868528613492 0.7636850906469214 0.8622367931194599 0.8775699732019073 0.809974012490083 1.0 17.38615603026001 -7.518418964963908 0.19859085656374714 1.0753146294424625 0.6078764161234753 0.4561555818156543 0.09096397010556483 2.5656799779132875 0.5288269155688358 0.4947671836616254 0.46618626286635284 3.03096579313655e-08 7.518418964963908 -0.46743821331898716 EAVTEILGIEPDREK ddPTM_KYSE-520_SHP099_60min_R1 1 EAVTEILGIEPDREK 15 1 H7C1D4;E9PGT1;Q15631 H7C1D4 TSN Translin 0 130.21 5.0671e-05 138360000.0 109150.0 114100.0 95988.0 92858.0 103150.0 107020.0 101460.0 107430.0 112730.0 117070.0 False True 103095.2319148694 108618.46473240848 102175.54006623011 101683.19640122431 111267.3181567831 106352.04848294666 111716.56695417697 107057.35040435047 92261.07369204215 116032.85087908168 0.8885003784170171 0.9361009740732841 0.8805742450705418 0.8763311047764292 0.9589294524249451 0.9165684345183983 0.9628011904197482 0.9226469020908171 0.7951289052458755 1.0 16.824173789192333 -4.21015994581822 20.018568303714137 0.9145342040999908 0.8884989167924513 0.022630939761926094 0.05386139941252755 15240.569424691397 5947606.488032427 0.012987726634538682 5.786497741294523 6.163679586045041e-05 4.21015994581822 -0.026035287307539456 EAVTHIGR ddPTM_KYSE-520_SHP099_60min_R1 1 EAVTHIGR 8 0 D6RBW1;P06730;P06730-3;P06730-2 D6RBW1 EIF4E Eukaryotic translation initiation factor 4E 0 127.56 0.0007019999999999999 0.0 196860.0 182390.0 134020.0 103680.0 171760.0 170100.0 133430.0 142600.0 151690.0 133140.0 False True 185939.78336931925 173627.71062702854 142659.14363958169 113533.71602747127 185276.53481928312 169038.3428046089 146918.4065513094 142105.35388309017 124146.91979371855 131960.48318135252 1.4090565515267421 1.3157553416079342 1.081074729345497 0.8603614755747941 1.4040304366319927 1.2809769919703953 1.1133515353183443 1.0768780960569506 0.9407886118687832 1.0 17.009746439977793 -4.651034071235233 4.147205521404601 1.107606299251553 1.3878115764198524 0.3448755413145933 0.14877085253462624 0.25876031322236775 7.793783042758977 0.040992192120939075 0.1208516655817373 2.2333970016781913e-05 4.651034071235233 0.28020527716829946 EAVVDLHADDSRIS(ph)EDETER ddPTM_KYSE-520_SHP099_60min_R1 3 EAVVDLHADDSRISEDETER 20 1 Q9UKV3-5 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 EAVVDLHADDS(0.015)RIS(0.985)EDETER;EAVVDLHADDS(0.064)RIS(0.935)EDET(0.001)ER;EAVVDLHADDS(0.011)RIS(0.989)EDETER 179.47 1.0119e-09 2632990000.0 2038820.0 1982890.0 1942700.0 2050020.0 1872090.0 1810990.0 1769610.0 1853140.0 2287440.0 1806710.0 True False 1925722.5903130907 1887628.9880214306 2067929.5504299018 2244853.284439013 2019412.8322649717 1799686.939657367 1948499.4485292837 1846711.889866129 1872098.5576698745 1790703.9549991095 1.0753997526710373 1.0541267766521292 1.1548137505682396 1.2536149697843992 1.127720093892335 1.0050164543576172 1.088119252258117 1.0312770487330762 1.0454539693417975 1.0 20.77209541532604 -6.201221804126002 7.510802613956074 1.0393997607903025 1.1370200187576904 0.44950698706080483 0.05464140595666667 0.31282481644945526 34.86097045072908 0.019919881112208125 0.019885252713286918 6.291847617357736e-07 6.201221804126002 0.09762025796738794 EAWEMHEFLT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 EAWEMHEFLTPR 12 0 A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35;Q8NI35-5 A0A0X1KG69 INADL InaD-like protein 1 EAWEMHEFLT(1)PR;EAWEMHEFLT(1)PR 134.14 6.1509e-05 197008000.0 252390.0 244810.0 230060.0 220820.0 218100.0 224564.0 207520.0 243060.0 290890.0 246070.0 True False 238389.42357300888 233048.96013269824 244890.03570901474 241806.66640804612 235263.22918075003 223162.4127782137 228498.14680002758 242216.88159063022 238071.70874015952 243890.01123956335 0.9774464413749546 0.9555494255309358 1.0041003092515712 0.9914578509348182 0.9646283912368203 0.9150125158631865 0.9368901401032904 0.9931398188862697 0.9761437441827466 1.0 17.895871146756043 -7.317354026688631 24.998998160687783 0.9884813630487684 0.9640770006888406 0.19127699600784642 0.02460973279001179 635.7644702132558 284242.44310428365 0.015195393960050659 0.007299640534569133 4.815550851565122e-08 7.317354026688631 -0.024404362359927823 EAWPHIK ddPTM_KYSE-520_SHP099_60min_R1 3 EAWPHIK 7 0 P52209-2;P52209;K7EMN2;K7EM49;K7EPF6 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ;; 94.887 0.010808 1439640000.0 4658750.0 3574090.0 2697420.0 2491700.0 4830240.0 3624720.0 3038630.0 2967090.0 3315040.0 3020280.0 False True 4400319.850512118 3402385.351581537 2871300.0092245983 2728510.4188430803 5210352.4076938415 3602096.7779583847 3345804.3745709686 2956797.85731401 2713112.301357826 2993522.6689422843 1.4699470614220884 1.1365824574776706 0.9591709590223776 0.9114714403706714 1.7405421584914338 1.2032969769462714 1.1176813221705642 0.9877319079593774 0.9063276284847588 1.0 21.513412764651505 -7.1058363365026995 2.5459834553131584 0.9549853345259671 1.225661408413629 0.22607236783944462 0.22536205386813915 0.511718374694423 6.4122715208706085 0.13708844629266234 0.0698512372681688 7.837249331813128e-08 7.1058363365026995 0.2706760738876619 EAYPGDVFYLHSR ddPTM_KYSE-520_SHP099_60min_R1 3 EAYPGDVFYLHSR 13 0 P25705-2;P25705-3;P25705 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 ;; 152.74 7.945700000000001e-06 2943230000.0 2064480.0 2122300.0 1376950.0 1338770.0 2326090.0 1939640.0 1678300.0 1391760.0 1533450.0 1570810.0 False True 1949959.17896115 2020341.5223627542 1465710.4001978955 1466006.2982841225 2509140.049358329 1927533.9872870757 1847958.9426295622 1386932.3093992246 1255014.1351287318 1556893.845471686 1.2524676519421776 1.2976745513119163 0.9414324582636108 0.941622514950576 1.6116320689790797 1.2380638493070144 1.1869524360986174 0.890832932144472 0.8061012886517674 1.0 20.570239149044557 -7.250681824729096 5.2152369523800015 0.883457892424922 1.2105819624639744 0.37694324591369455 0.18313426927112153 0.19671837929287733 17.803296794554544 0.10108802573948099 0.05291829553857573 5.614591647679063e-08 7.250681824729096 0.3271240700390524 EAYSGCSGPVDSECPPPPS(ph)SPVHK ddPTM_KYSE-520_SHP099_60min_R1 2 EAYSGCSGPVDSECPPPPSSPVHK 24 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 EAYSGCSGPVDSECPPPPS(0.634)S(0.366)PVHK;EAYSGCSGPVDSECPPPPS(0.63)S(0.37)PVHK 230.8 3.065e-22 2248400000.0 694790.0 984900.0 648070.0 781060.0 557590.0 800190.0 636010.0 824890.0 1015010.0 907170.0 True False 656248.6136704726 937583.9256349612 689845.629148662 855291.7075657485 601469.1607468802 795195.7173945913 700304.0976594324 822028.6491207725 830709.7703198768 899133.1795675798 0.7298680869346656 1.042764238870457 0.767234092596193 0.951240291207009 0.6689433494559114 0.8844025951495027 0.7788658160699061 0.9142457066439377 0.9239006959118006 1.0 19.778175297931032 -7.782154771979147 1.723365508828693 0.9924485253458725 0.8383871750780937 0.21047375754502295 0.10407696109200723 0.5340430511140234 3.1647304275135304 0.09190490833488268 0.027245788086693836 1.65137318415619e-08 7.782154771979147 -0.15406135026777878 EAYSGCSGPVDSECPPPPSS(ph)PVHK ddPTM_KYSE-520_SHP099_60min_R1 3 EAYSGCSGPVDSECPPPPSSPVHK 24 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 EAYSGCSGPVDSECPPPPS(0.29)S(0.71)PVHK;EAYSGCSGPVDSECPPPPS(0.205)S(0.795)PVHK;EAYSGCSGPVDSECPPPPS(0.183)S(0.817)PVHK 218.0 2.9541e-21 2408320000.0 799556.0 962830.0 775874.0 921057.0 718402.0 854942.0 746185.0 923150.0 949627.0 942735.0 True False 755203.0348046294 916574.2015627054 825888.0794822935 1008593.9803541162 774936.1502517615 849605.9898533673 821616.661863814 919947.8081148306 777198.6749485757 934383.1013367313 0.8082370429476236 0.9809404731864816 0.8838859331903322 1.0794223257154572 0.8293559131614597 0.9092694298922127 0.8793145559764584 0.9845509907004423 0.8317773232806895 1.0 19.833654657218364 -11.288592557240017 2.2707972472046474 1.3848819807741728 0.9149118136372613 0.09963474461198052 0.08009081041043803 11662811.319781419 1985310.5859897248 22990108.047961786 0.018863863078492853 5.145261390431834e-12 11.288592557240017 -0.46997016713691153 EAYVHK ddPTM_KYSE-520_SHP099_60min_R1 4 EAYVHK 6 0 P61326;Q96A72;F5H6N1;F5H6P7;F5H3U9 P61326 MAGOH;MAGOHB Protein mago nashi homolog;Protein mago nashi homolog 2 0 ;;; 74.743 0.033852999999999994 1921500000.0 4667880.0 4099370.0 2657430.0 2575000.0 4420180.0 4324090.0 3046090.0 3517250.0 3505430.0 3822750.0 False True 4408943.391211922 3902430.111920179 2828732.1898383386 2819727.225798018 4768023.01861609 4297101.7503702575 3354018.504173558 3505049.4806823195 2868932.2766991532 3788883.4090544987 1.1636524313932788 1.0299683813427278 0.7465872882439099 0.7442106080803552 1.2584243176292225 1.134134067071381 0.885226105442643 0.9250877111462744 0.7571972971886946 1.0 21.853341315460884 -4.521775302110929 24.996348200970587 0.9358746871335271 1.1302314901329442 0.16749490978833492 0.15992065121951962 67.28752659791293 1524202.9524080816 0.04411655076771543 0.1200970620975115 3.0076320068667084e-05 4.521775302110929 0.19435680299941716 ECEDVMDWINDK ddPTM_KYSE-520_SHP099_60min_R1 3 ECEDVMDWINDK 12 0 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3;A0A5F9ZHC3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ;; 149.38 0.00015099 112719000.0 187127.0 200072.0 203315.0 119124.0 179944.0 210964.0 153005.0 181715.0 200501.0 192650.0 False True 176746.6922815738 190460.24080580566 216421.01021550206 130445.50914406354 194104.5690586929 209647.2954228775 168472.2385848989 181084.67307759964 164095.07261889603 190943.27087943192 0.9256502806698943 0.9974702953845843 1.133430935893822 0.6831636880591162 1.0165562167480473 1.0979559240673946 0.8823156627042281 0.9483689697132227 0.8593917547506099 1.0 17.542784552606538 ECESRVR ddPTM_KYSE-520_SHP099_60min_R1 1 ECESRVR 7 1 C9JYQ7 C9JYQ7 FAM53A 0 69.998 0.031052 112260000.0 251400.0 195820.0 201200.0 265620.0 269760.0 265140.0 254550.0 220450.0 241340.0 289910.0 False True 237454.34084652454 186412.5132681876 214169.67393138196 290864.44493843504 290988.5772755579 263485.16291131044 280282.39816859603 219685.31040341695 197518.73968630782 287341.6229465673 0.8263833774290348 0.6487487310630664 0.7453485914611401 1.012260047659447 1.0126920502904961 0.9169752721843117 0.975432641099532 0.7645439882695609 0.6874003761127133 1.0 18.132407464415383 -5.152817357070158 7.34753980861018 0.9071593484300913 0.7283470137590532 0.333753387693988 0.10965075510546479 0.324159460563983 19.457673692921485 0.03202602088638889 0.05585514507542018 7.033680597544777e-06 5.152817357070158 -0.17881233467103808 ECFTPFVNGSFFEHDGQPYCEVHYHER ddPTM_KYSE-520_SHP099_60min_R1 1 ECFTPFVNGSFFEHDGQPYCEVHYHER 27 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 0 78.236 0.0087509 605060000.0 87860.0 88381.0 67985.0 92070.0 102460.0 72295.0 46522.0 58582.0 72102.0 57582.0 False True 82986.23065543221 84135.04409741436 72367.42187984605 100820.30511814523 110523.01908234606 71843.78008853144 51224.89777096612 58378.79271514157 59010.09434350779 57071.868278118105 1.4540654294166486 1.4741946713118648 1.2680051321816006 1.7665499336176576 1.936558630668161 1.2588300025229247 0.8975507428868634 1.0228996259707965 1.033961146250627 1.0 15.80049217073025 -6.515231984589396 6.367525530916701 0.9999522463229624 1.5710333508202279 0.7223215835481487 0.1730082854574288 0.08983447016640513 16.75017749232223 0.07068140181302893 0.05805104260091927 3.053289719302768e-07 6.515231984589396 0.5710811044972655 ECINAAPDS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 7 ECINAAPDSPSK 12 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 ECINAAPDS(0.816)PS(0.184)K;ECINAAPDS(0.997)PS(0.003)K;ECINAAPDS(0.989)PS(0.011)K;ECINAAPDS(0.996)PS(0.004)K;ECINAAPDS(1)PSK;ECINAAPDS(0.988)PS(0.012)K;ECINAAPDS(0.991)PS(0.009)K 233.47 2.2834e-17 5566350000.0 8151030.0 8256280.0 6386890.0 5779320.0 6078670.0 7999830.0 6639050.0 8065790.0 9137770.0 7996580.0 True False 7698876.117224542 7859635.915871071 6798599.148785318 6328584.835184076 6557026.7460988145 7949900.093583736 7310189.964883975 8037811.657059529 7478581.3124362 7925736.52244509 0.9713767415081115 0.9916600045450883 0.8577876806189805 0.7984853921477202 0.8273081911731242 1.0030487477182992 0.9223357279392352 1.0141406586374717 0.9435818729599981 1.0 22.918113577498104 -6.275182915519265 24.702690549393573 0.9741123393915123 0.8882103924589648 0.33929818346466345 0.060849276426396974 936.7568969046879 1683725.975364727 0.02395354003630975 0.021239232116434525 5.306608941721943e-07 6.275182915519265 -0.08590194693254749 ECINAAPDSPS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 ECINAAPDSPSK 12 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 ECINAAPDS(0.027)PS(0.973)K;ECINAAPDS(0.257)PS(0.743)K 242.19 1.6978e-17 1726600000.0 3177000.0 3087300.0 2444400.0 2276380.0 2441400.0 2915000.0 2484000.0 2941500.0 3295600.0 2979000.0 True False 3000765.476807511 2938981.473868225 2601969.9351782827 2492726.4707813947 2633524.290334174 2896806.403735656 2735106.961503799 2931296.6230512625 2697202.1153153027 2952608.3776269318 1.0163100191496726 0.99538479133841 0.881244514136865 0.8442455456232387 0.8919314563656383 0.9811007872516689 0.9263358399402962 0.9927820584886378 0.9134980906215189 1.0 21.493558585083882 -6.270754410386767 24.692989641888175 0.9600167628138956 0.9226791011319726 0.10186513200639902 0.054112922916844344 1570.5224595048053 4163242.2455877094 0.020828957807628737 0.01862090228990981 5.3609973137627e-07 6.270754410386767 -0.037337661681922985 ECPDQLGPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 ECPDQLGPSPK 11 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 ECPDQLGPS(1)PK 122.1 0.0009771 277120000.0 570520.0 540260.0 449890.0 423690.0 454130.0 517000.0 439720.0 531530.0 598740.0 501220.0 True False 538872.1182965762 514305.09865320707 478890.6292494507 463957.3702129569 489867.44735375576 513773.21122858714 484171.1888536442 529686.2464900344 490023.90900712594 496779.5807432587 1.084730812587628 1.03527825737871 0.9639901634703999 0.9339300329510429 0.9860861161419692 1.0342075865113123 0.9746197461039956 1.0662399724592992 0.9864010680027846 1.0 18.922246349754754 ECPSDECGAGVFMASHFDR ddPTM_KYSE-520_SHP099_60min_R1 4 ECPSDECGAGVFMASHFDR 19 0 P62979;A0A2R8Y422 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 0 ;;; 241.51 6.6104e-26 3762400000.0 1572530.0 1613240.0 1126850.0 1212800.0 1466320.0 1489490.0 1140140.0 1307650.0 1474180.0 1242850.0 False True 1485298.6261391619 1535737.5288773938 1199488.5540237464 1328064.1473583833 1581711.0417804588 1480193.5404117391 1255396.4778941001 1303114.067357804 1206506.0730536217 1231839.315922668 1.2057567955010826 1.2467028037070735 0.9737378394399676 1.0781147591182714 1.2840238343876296 1.201612516566781 1.0191235672274248 1.0578604291272762 0.9794346206184601 1.0 20.232382649025563 -6.7716277354723 24.800302725783368 1.0189263023548343 1.1614738572994814 0.43248100897630204 0.08454692368429104 217.60618238466924 529687.061812456 0.038244799248269915 0.026119424812516324 1.6918905493642762e-07 6.7716277354723 0.1425475549446471 EDAANNYAR ddPTM_KYSE-520_SHP099_60min_R1 5 EDAANNYAR 9 0 Q9BQE3;F5H5D3;F8VQQ4;Q9NY65;C9J2C0;A0A1W2PQM2;Q9NY65-2;F8VVB9;F8VRZ4;F8VS66;F8VWV9;C9JQ00;C9JEV8;F8VX09;C9JJQ8;A6NHL2-2;A6NHL2;C9JDL2;C9K0S6;P68363;P68366-2;P68366;P68363-2;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1A;TUBA8;TUBA1B;TUBA4A;TUBAL3 Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain 0 ;;;; 218.82 4.0491e-08 3453280000.0 3127950.0 4004690.0 2650100.0 2235060.0 3434480.0 3751390.0 2826470.0 3399790.0 3375100.0 3145450.0 False True 2954436.378086268 3812298.681237759 2820929.686309921 2447479.430404707 3704754.0364819076 3727976.1835025325 3112197.1712889075 3387996.922006951 2762266.9193472187 3117583.7601230717 0.9476686451464056 1.22283761225625 0.9048448745443042 0.7850565112990223 1.1883414597770603 1.1957902242072767 0.9982721911426843 1.086738058281778 0.8860281332868419 1.0 21.571996890787574 -7.756872322948467 24.999724070137685 0.9430140633045385 1.0427930538023211 0.0780553339240897 0.13487886417526576 299.2280637264919 1638021.8006785256 0.10199361978417489 0.03564577705652445 1.7503611969110642e-08 7.756872322948467 0.0997789904977826 EDAEGVAAEEEQEGDS(ph)GEQETGATDARPR ddPTM_KYSE-520_SHP099_60min_R1 1 EDAEGVAAEEEQEGDSGEQETGATDARPR 29 1 Q96KC8 Q96KC8 DNAJC1 DnaJ homolog subfamily C member 1 1 EDAEGVAAEEEQEGDS(0.999)GEQETGATDARPR 154.43 3.1298000000000004e-07 685150000.0 71577.0 72480.0 64539.0 87334.0 74705.0 70625.0 70769.0 97550.0 113430.0 54049.0 True False 67606.48112478791 68997.95200530195 68699.28720605107 95634.19710207554 80583.85848669389 70184.20317798649 77923.02115888178 97211.6218183411 92833.97133760632 53570.16790948572 1.262017345904506 1.2879920802541376 1.2824168728036864 1.7852136895232973 1.5042674240418954 1.310135956575169 1.4545972917341534 1.814659643826275 1.732941578500599 1.0 15.709142197574572 -5.123755656653951 13.918483413565252 1.5370368424404812 1.2775615046374684 0.17900987660648204 0.2291633275014592 1.3574960490866606 146.5702950085486 0.06187710817311993 0.10719515634873962 7.520458920853744e-06 5.123755656653951 -0.2594753378030128 EDAGAVCSES(ph)SVTVKIENK ddPTM_KYSE-520_SHP099_60min_R1 1 EDAGAVCSESSVTVKIENK 19 1 F6UFK6;P30203-6 F6UFK6 CD6 1 EDAGAVCS(0.045)ES(0.318)S(0.318)VT(0.318)VKIENK 62.684 0.024099000000000002 0.0 212200.0 197310.0 188420.0 192770.0 183530.0 156890.0 174840.0 214470.0 240140.0 178140.0 True False 200428.8429897873 187830.9314316522 200565.85468265903 211090.80284158586 197972.76685714393 155910.7913146093 192514.53347396333 213726.05362767412 196536.62943676946 176561.81819082305 1.1351765916522758 1.0638253126089232 1.1359525900775054 1.1955631461239533 1.1212660182462582 0.8830379801940264 1.0903520106816018 1.2104885179460771 1.1131321111813552 1.0 17.42981386576744 -6.028741264098184 24.97788262947843 1.0664542569295938 1.131760061411264 0.1503869030815863 0.08382643114425228 1685.1003430989267 1464449.920275689 0.029976511449702013 0.030040659652931987 9.359631188056458e-07 6.028741264098184 0.06530580448167012 EDAIEHFMK ddPTM_KYSE-520_SHP099_60min_R1 1 EDAIEHFMK 9 0 P09874 P09874 PARP1 Poly [ADP-ribose] polymerase 1 0 85.53299999999999 0.0037327 0.0 455990.0 435730.0 295570.0 401800.0 507900.0 422400.0 398100.0 452540.0 365400.0 419190.0 False True 430695.3257064709 414796.8767559356 314622.91512872087 439986.951194425 547868.8404443052 419763.64491867553 438343.8330815874 450970.2443636301 299052.5709844073 415476.3027248853 1.036630303297137 0.9983647058460526 0.7572583876993191 1.0589940949911887 1.318652440226142 1.010319101632685 1.0550393132092644 1.0854295212650136 0.7197824978779357 1.0 18.664406667638808 -7.741304036696847 24.99178988161127 0.8598910836576502 1.0386897388954948 0.20441049132710165 0.14217705315157814 347.712393391401 431580.2263047656 0.10113811917549745 0.03812019873100958 1.814245118845799e-08 7.741304036696847 0.17879865523784455 EDDDVIVNKPHVS(ph)DEEEEEPPFYHHPFK ddPTM_KYSE-520_SHP099_60min_R1 14 EDDDVIVNKPHVSDEEEEEPPFYHHPFK 28 1 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;H7C1M2;H7C2G8;J3QSZ5 P18583-10 SON Protein SON 1 EDDDVIVNKPHVS(0.997)DEEEEEPPFY(0.003)HHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;EDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK 297.29 1.5898e-52 120530000000.0 44196530.0 39863880.0 35489020.0 41197660.0 40313140.0 39219170.0 40144020.0 43049100.0 46530720.0 37147760.0 True False 41744860.37730177 37948759.36789624 37776699.013639696 45113073.21987182 43485554.767609656 38974388.61241761 44202169.30947984 42899772.71983547 38081914.191996604 36818659.74691998 1.1337963050323656 1.030693665351868 1.026020481823754 1.2252774416549939 1.1810738105763718 1.0585499005209704 1.200537162767787 1.1651638874069605 1.0343101691848602 1.0 25.133933775645033 -7.905181216576382 5.1765477372014885 1.0013154309173513 1.1258832077194163 0.31337294205544775 0.06616911173499572 0.24857083771790456 9.827427687499402 0.06786481670046286 0.017700413994055395 1.243995425733411e-08 7.905181216576382 0.12456777680206499 EDEDEIEWWWAR ddPTM_KYSE-520_SHP099_60min_R1 1 EDEDEIEWWWAR 12 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 0 129.39 0.00055467 44941000.0 73373.0 90482.0 69643.0 58564.0 69889.0 85303.0 61324.0 67582.0 82504.0 84121.0 False True 69302.85342455067 86135.10890374907 74132.29921273979 64129.90495209136 75388.86668598562 84770.59233545874 67523.22838456475 67347.57381575737 67523.35335658882 83375.75338514762 0.8312111208688178 1.0330954193103938 0.8891349847274131 0.7691673220132524 0.9042061225849772 1.0167295513824959 0.8098664856753569 0.807759703287485 0.8098679845766442 1.0 16.3473402721298 EDEIS(ph)PPPPNPVVK ddPTM_KYSE-520_SHP099_60min_R1 10 EDEISPPPPNPVVK 14 0 K7EPB2;P10644-2;P10644;K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41 K7EPB2 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed 1 EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK;EDEIS(1)PPPPNPVVK 192.32 8.292900000000001e-11 18721340000.0 23246700.0 22915200.0 16830860.0 15960570.0 17284580.0 23790400.0 19801000.0 25160000.0 24698500.0 24252500.0 True False 21957159.209852476 21814319.395583544 17915804.165928133 17477457.774079673 18644778.11019261 23641915.288999178 21802678.31913717 25072725.832388148 20213874.99851773 24037641.718159467 0.9134489758729006 0.9075066369386688 0.7453228721848145 0.7270870403595441 0.7756492225319772 0.9835372190916161 0.9070223516421799 1.0430609677257447 0.840925879315647 1.0 24.518792027465036 -6.262839517483612 24.995758356731105 0.954607664133639 0.8103867086163128 0.4600986707592898 0.07638208403482252 123.35769481082218 2202210.5894473526 0.027502943735913492 0.02557372826860974 5.459595693396221e-07 6.262839517483612 -0.14422095551732617 EDEKDDKPIR ddPTM_KYSE-520_SHP099_60min_R1 3 EDEKDDKPIR 10 2 C9JLS9;P35998 C9JLS9 PSMC2 26S protease regulatory subunit 7 0 ;; 117.67 0.00049166 2997700000.0 5140120.0 4528700.0 3170870.0 3194280.0 4620510.0 4115470.0 3193890.0 4323520.0 3608130.0 3226960.0 False True 4854987.297024821 4311134.454282712 3375269.3537713834 3497863.4108046945 4984117.849894309 4089783.825173914 3516759.570562549 4308522.7182371495 2952984.54555547 3198371.6449368927 1.5179559588424925 1.3479154184934552 1.055308678437831 1.0936388259763075 1.5583298012863203 1.2787081300098913 1.099546882279823 1.3470988354519886 0.9232774903536064 1.0 21.60890615640859 -1.0000003740167989 0.034886629344571596 0.11646146361683864 2.9411397071463394 0.28762089047448325 0.17567171781587332 1530.8227344105835 4.091221805864867 98.11718616212445 274.27667608093657 0.09999991387948652 1.0000003740167989 2.8246782435295006 EDEKGDDVDDPENQNSALADTDASGGLT(ph)KESPDTNGPK ddPTM_KYSE-520_SHP099_60min_R1 1 EDEKGDDVDDPENQNSALADTDASGGLTKESPDTNGPK 38 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 EDEKGDDVDDPENQNSALADT(0.001)DAS(0.01)GGLT(0.491)KES(0.491)PDT(0.007)NGPK 124.07 1.6394e-09 356880000.0 1065200.0 975740.0 933550.0 853830.0 929090.0 975310.0 895930.0 986100.0 1110400.0 904310.0 True False 1006111.2325764433 928863.985784402 993728.1267328128 934977.746486649 1002204.0972010234 969222.7285171251 986499.3478341786 982679.4492574709 908779.3509060914 896298.5169425328 1.1225180155474377 1.036333284309068 1.1087021878856091 1.0431544053827728 1.1181588257222128 1.0813615220778814 1.1006370413278606 1.0963751815741054 1.0139248628973898 1.0 19.773619783936628 -7.810273087378957 5.544510467330109 1.0030744173594468 1.0870366905468882 0.5840722734108159 0.027507673569349404 0.13045545163923022 8.60749385914058 0.02377645810109227 0.00638434351158209 1.547843018427952e-08 7.810273087378957 0.08396227318744143 EDEKGDDVDDPENQNSALADTDASGGLTKES(ph)PDTNGPK ddPTM_KYSE-520_SHP099_60min_R1 1 EDEKGDDVDDPENQNSALADTDASGGLTKESPDTNGPK 38 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 EDEKGDDVDDPENQNSALADTDASGGLT(0.008)KES(0.992)PDTNGPK 370.72 7.226499999999998e-98 1278400000.0 378140.0 343960.0 339820.0 325150.0 363150.0 332170.0 344630.0 380690.0 428740.0 366140.0 True False 357163.8203965982 327435.6453055147 361725.3409312245 356052.15824008797 391727.83895914454 330096.8038177945 379468.56366467546 379369.4752437135 350891.62365586974 362896.2844526095 0.9842035746806884 0.9022843697598519 0.9967733383571253 0.9811402692566964 1.0794484698294016 0.9096174801450791 1.0456667095312466 1.0453936606596896 0.9669198575156329 1.0 18.4691977601622 -4.89851966972969 7.72419122474701 1.0054982456299764 0.9435385144707309 0.1979488742062362 0.04831217024604212 0.33131819347665536 22.292151069694967 0.012140260834318474 0.025493661114009164 1.2632238895525805e-05 4.89851966972969 -0.06195973115924547 EDENDAS(ph)DDEDDDEKRR ddPTM_KYSE-520_SHP099_60min_R1 8 EDENDASDDEDDDEKRR 17 2 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR;EDENDAS(1)DDEDDDEKRR 309.82 2.0528000000000001e-47 5376680000.0 4282040.0 3795480.0 3425610.0 3585490.0 3885280.0 3823510.0 3872820.0 4076440.0 4357730.0 3796910.0 True False 4044506.7051648833 3613139.443668376 3646430.3017697954 3926253.891583125 4191029.4317807686 3799646.055830975 4264322.440680813 4062299.7810882535 3566476.081433716 3763272.331351283 1.074731337264826 0.960105760502058 0.968952013223148 1.0433084682376201 1.1136662624349298 1.0096654510428777 1.1331421340824455 1.0794594234506538 0.9477060832727716 1.0 21.843556263958174 -5.417222751900801 6.45899058595676 1.0557705897392877 0.9976706710723627 0.09942702436139916 0.05916217345660482 0.44299176185458083 23.290221445453298 0.01655279070939506 0.02461467409994956 3.826284408594851e-06 5.417222751900801 -0.05809991866692499 EDENSWFNLFVIHQNR ddPTM_KYSE-520_SHP099_60min_R1 1 EDENSWFNLFVIHQNR 16 0 F8W7U8;P49959-2;P49959;P49959-3;F5GXT0 F8W7U8 MRE11A Double-strand break repair protein MRE11A 0 89.541 0.0011823 0.0 57710.0 45331.0 42973.0 44416.0 58359.0 42066.0 40557.0 36285.0 39250.0 30017.0 False True 54508.71125796719 43153.2307167818 45743.10833923106 48637.28328584265 62951.52128271164 41803.450490409574 44656.89735817617 36159.13580398268 32123.189411981322 29751.072732872603 1.8321595240409378 1.4504764619495842 1.5375280330207561 1.6348077167685542 2.1159412249748946 1.4051073339691729 1.5010180560257176 1.2153893114593368 1.07973213942258 1.0 14.86065406808747 -7.2437949677197695 1.3115427580956567 1.0172327710928482 1.6749970671445236 0.6618680095963752 0.18600360877438402 0.300374404007129 0.9183529345519197 0.16053314764722693 0.06233848256070382 5.7043351281926e-08 7.2437949677197695 0.6577642960516754 EDFKPR ddPTM_KYSE-520_SHP099_60min_R1 1 EDFKPR 6 1 Q7Z5V6-2;Q7Z5V6 Q7Z5V6-2 PPP1R32 Protein phosphatase 1 regulatory subunit 32 0 86.113 0.018343 353800000.0 1487900.0 1140500.0 829310.0 756060.0 1218800.0 1352000.0 989890.0 1135600.0 1059400.0 1111800.0 False True 1405363.2209448863 1085708.6680745995 882768.6495429154 827915.715082272 1314712.6259766077 1343561.6665010634 1089957.7415954086 1131660.8686510324 867039.6653007148 1101950.3169673104 1.2753417275767949 0.9852609971224385 0.8010965975057684 0.7513185506954505 1.1930779507326998 1.2192579336958622 0.9891169545602504 1.026961788772373 0.7868228285345061 1.0 20.07162774869541 -4.263476994688644 6.805801993074562 0.9759012990581344 1.2801259184118166 0.2669402139456596 0.15050394909181994 0.16578564488337746 54.61790772045901 0.040870706747140696 0.23551372923978717 5.451587729039434e-05 4.263476994688644 0.30422461935368217 EDFPQKWPDLLTEMVNR ddPTM_KYSE-520_SHP099_60min_R1 1 EDFPQKWPDLLTEMVNR 17 1 P55060-4;P55060-3;P55060;P55060-2 P55060-4 CSE1L Exportin-2 0 62.357 0.050501 7641300.0 38637.0 40389.0 32617.0 32011.0 42803.0 37798.0 37807.0 38011.0 47913.0 36124.0 False True 36493.72858905004 38448.65181487504 34719.5440090452 35053.315815541915 46171.35258424419 37562.088661543814 41628.90052076256 37879.14871283412 39213.20698843981 35803.96946404671 1.0192648785966585 1.0738656185450062 0.9697121444567631 0.9790343456398436 1.289559601222655 1.0491040301903551 1.1626895325828348 1.0579594743222882 1.095219540610338 1.0 15.127831922587365 EDGEDENEEGTAS(ph)EHGGQNK ddPTM_KYSE-520_SHP099_60min_R1 2 EDGEDENEEGTASEHGGQNK 20 0 H3BP78;Q9NVI1-2;Q9NVI1-1;Q9NVI1 H3BP78 FANCI Fanconi anemia group I protein 1 EDGEDENEEGT(0.001)AS(0.999)EHGGQNK;EDGEDENEEGT(0.036)AS(0.964)EHGGQNK 198.68 2.0122e-13 34834000.0 43806.0 33086.0 32019.0 41613.0 38607.0 43211.0 41891.0 44915.0 38809.0 36724.0 True False 41375.99385490398 31496.49889690153 34082.995972211385 45567.88700859536 41645.15125621838 42941.304120693414 46125.751096761574 44759.20034823981 31762.26389527603 36398.65393083967 1.1367451646294848 0.8653204307155802 0.936380670476765 1.2519113232917338 1.1441398721872373 1.1797497842168916 1.2672378265527116 1.2296938351974729 0.8726219369437906 1.0 15.15159747823688 -5.247944433195496 24.863765643801084 1.1523702115780072 0.9680659074920088 0.21997240957418795 0.13091539063768612 941.6579175259217 1734954.6770506522 0.034897723809076305 0.06002108598879623 5.650092615948306e-06 5.247944433195496 -0.1843043040859984 EDGEDENEEGTAS(ph)EHGGQNKEPAK ddPTM_KYSE-520_SHP099_60min_R1 1 EDGEDENEEGTASEHGGQNKEPAK 24 1 H3BP78;Q9NVI1-2;Q9NVI1-1;Q9NVI1 H3BP78 FANCI Fanconi anemia group I protein 1 EDGEDENEEGTAS(1)EHGGQNKEPAK 307.94 7.2851e-61 92208000.0 178570.0 151650.0 146740.0 147850.0 156790.0 158310.0 154250.0 158210.0 176120.0 162280.0 True False 168664.36612953048 144364.50636870932 156199.09519230117 161901.61954727673 169128.48098693197 157321.92856788705 169843.09533492802 157661.20643649145 144141.047623902 160842.32545192956 1.0486317308309414 0.8975529666278985 0.9711317885601194 1.006585916315067 1.0515172577349914 0.9781127456709482 1.0559602073503251 0.9802221274375392 0.8961636635064754 1.0 17.2952875742659 -3.9507879157553187 21.596678277782985 0.9853368975823932 1.78009630292398 0.13057287410084195 0.050962768664365415 1271.8448287222413 544410.5917770539 0.012644700166417605 91386.46998314068 0.00011199846855270664 3.9507879157553187 0.7947594053415868 EDGGTLGVFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 EDGGTLGVFSPK 12 0 O60333-3;A0A3B3ITK3;A0A3F2YNW9;A0A3B3IUA1;A0A3B3IU40;A0A3B3IT28;A0A3B3ITE5;A0A3B3ITF7;A0A3B3ITW6;Q12756;Q12756-3;Q12756-2;A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4 O60333-3;A0A087WWA3 KIF1B;KIF1A;KIF1Bbeta Kinesin-like protein KIF1B;Kinesin-like protein KIF1A;Kinesin-like protein 1 EDGGTLGVFS(1)PK 82.20200000000001 0.0076871000000000005 0.0 125890.0 124460.0 108520.0 87457.0 105670.0 120880.0 89013.0 120480.0 150960.0 146890.0 True False 118906.63074450675 118480.75478173133 115515.37283813926 95768.88698509411 113985.62781994457 120125.54308184059 98011.30272316342 120062.08300024334 123549.46939191603 145588.66887869054 0.816729980844758 0.8138047809232568 0.793436561566413 0.657804537418307 0.7829292533399099 0.8251022830762558 0.6732069430817434 0.82466639694524 0.8486200907219069 1.0 17.151538549831532 -8.091273333770324 1.6632598281353728 0.9986188957334905 0.7680382358023544 0.6070728801571406 0.05626615021539567 0.3316541577433888 1.9818215174612437 0.05478964770314063 0.015762169789430656 8.10450820416141e-09 8.091273333770324 -0.23058065993113608 EDGGTVGVFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 EDGGTVGVFSPK 12 0 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 EDGGT(0.003)VGVFS(0.997)PK;EDGGTVGVFS(1)PK;EDGGTVGVFS(1)PK;EDGGTVGVFS(1)PK;EDGGTVGVFS(1)PK 206.66 5.263399999999999e-09 3027630000.0 5202020.0 4715300.0 4248830.0 4106420.0 4489070.0 4389030.0 4200360.0 4647550.0 5635000.0 4644480.0 True False 4913453.580630227 4488769.910190404 4522716.380168365 4496692.922159808 4842334.269685602 4361636.435741983 4624973.380363168 4631428.733796325 4611826.046790186 4603333.520550764 1.0673685838088827 0.9751129024545124 0.982487225828305 0.9768340490831529 1.0519190599742254 0.9474952045664805 1.0047009107021676 1.0061032321729753 1.0018448644230336 1.0 22.134247541760708 EDGKEDISDPMDPNPCS(ph)ATYSNLGQSR ddPTM_KYSE-520_SHP099_60min_R1 1 EDGKEDISDPMDPNPCSATYSNLGQSR 27 1 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 EDGKEDISDPMDPNPCS(0.331)AT(0.331)Y(0.275)S(0.048)NLGQS(0.016)R 94.01899999999999 0.00065986 195820000.0 231460.0 225050.0 217550.0 239490.0 256860.0 287470.0 270910.0 341510.0 334440.0 332550.0 True False 218620.45239592926 214238.26019306286 231573.62109230718 262251.0575947061 277073.42066651746 285675.7930984181 298296.2266268095 340325.3815190333 273714.1265463194 329603.86571998504 0.663282428191113 0.649987098073264 0.7025816295766402 0.7956552846303734 0.8406255189431097 0.8667246437610473 0.905014344947723 1.0325284892385234 0.8304336053474969 1.0 18.330373637535452 -5.6003371383223435 0.6320929618127399 0.9591082574966023 0.6112518236932325 0.8285431029365111 0.051485809279262044 0.37428063387009386 0.29763212808526707 0.032115923006606886 0.07587832742185133 2.509937236675059e-06 5.6003371383223435 -0.34785643380336984 EDGVTPYMIFFK ddPTM_KYSE-520_SHP099_60min_R1 3 EDGVTPYMIFFK 12 0 Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;P13693-2;H0YCX0 Q5W0H4 TPT1 Translationally-controlled tumor protein 0 ;; 182.71 6.7232e-07 553221900.0 446131.0 543282.0 349330.0 339679.0 525980.0 557225.0 419386.0 372991.0 411463.0 375626.0 False True 421383.22408989974 517181.9172370922 371848.3707477624 371961.99003178487 567371.6335831771 553747.1520828818 461781.6296929276 371697.18127775344 336751.6913381418 372298.2458726062 1.131843162737032 1.3891602309994837 0.9987916270628959 0.9990968105690824 1.5239707408595247 1.4873751306160174 1.2403540301689764 0.9983855293396724 0.9045212946111281 1.0 18.506099293213254 -7.286116759594816 4.409244209602496 0.9556537688558747 1.2591878920830126 0.36775919089051123 0.17196628374609077 0.2480316811752018 12.036235366301225 0.10552988241434003 0.05083458579973527 5.174676926264429e-08 7.286116759594816 0.3035341232271379 EDGWIR ddPTM_KYSE-520_SHP099_60min_R1 2 EDGWIR 6 0 P28074;P28074-3 P28074 PSMB5 Proteasome subunit beta type-5 0 ; 120.06 0.061671000000000004 1047580000.0 961580.0 880230.0 654530.0 569890.0 914540.0 911480.0 685890.0 683540.0 724380.0 750230.0 False True 908239.2405377928 837942.4295478344 696722.0510850287 624052.1742563233 986509.0949791991 905791.115223661 755226.4548413211 681168.9592794353 592850.8521337851 743583.5458701076 1.2214353660488986 1.1268974874468374 0.9369788438093479 0.8392495742036435 1.3266957028007271 1.2181430321508062 1.01565783567412 0.9160624425630108 0.797288825749981 1.0 19.50413532087194 -7.134992841385186 3.3884649653987666 0.8912366416245843 1.1022947700434274 0.29915591483782433 0.1405276849804783 0.3488238881797722 7.363440709114995 0.08010149388800178 0.04289047776062103 7.328366126195645e-08 7.134992841385186 0.21105812841884308 EDHS(ph)LEHR ddPTM_KYSE-520_SHP099_60min_R1 3 EDHSLEHR 8 0 H3BU36;H3BSM5;P60520 H3BU36 GABARAPL2 Gamma-aminobutyric acid receptor-associated protein-like 2 1 EDHS(1)LEHR;EDHS(1)LEHR;EDHS(1)LEHR 119.53 0.009558200000000001 922590000.0 702470.0 587826.0 709399.0 528787.0 812720.0 793850.0 627107.0 634320.0 705310.0 715782.0 True False 663502.5887607728 559585.9566151854 755127.9946185314 579042.757494391 876676.4402557522 788895.2876862941 690501.095534527 632119.691971401 577243.4834182053 709440.72834997 0.9352473888889339 0.7887705544009018 1.064398989856167 0.8161961025851152 1.235728941436365 1.1119960500733035 0.9733034317616736 0.8910112807332 0.8136599159746137 1.0 19.436322630903675 -4.761387646128 24.999999999991218 0.9909685680411336 0.8620089781572997 0.13504598053089634 0.12768866321062472 2.714716668560457 1308111.2066301655 0.03467553412552717 0.08065698163154227 1.732257115239341e-05 4.761387646128 -0.12895958988383394 EDHYMLR ddPTM_KYSE-520_SHP099_60min_R1 1 EDHYMLR 7 0 P16144-4;P16144-2;P16144-3;P16144;P16144-5 P16144-4 ITGB4 Integrin beta-4 0 135.87 0.0030639 240910000.0 337800.0 398600.0 233350.0 307820.0 445910.0 441880.0 321560.0 423660.0 410700.0 317020.0 False True 319061.56061239453 379450.6576892022 248392.11437320118 337075.12025054236 481000.5801191578 439122.06301293644 354066.42292317346 422190.4223429872 336127.2329044772 314211.4494378281 1.0154358193606376 1.2076283609909726 0.7905253446926022 1.0727652377200794 1.5308181193897954 1.3975367982248654 1.1268412515096187 1.343650662947992 1.0697485196858987 1.0 18.261376225871672 -5.5423362414170745 24.98680079714595 1.2671545143668406 1.009307235928696 0.2792336981225284 0.17596377878308295 280.2975259158183 359948.80268063117 0.05147142252438687 0.06645818504918143 2.8685588136215917e-06 5.5423362414170745 -0.2578472784381445 EDIFYTSK ddPTM_KYSE-520_SHP099_60min_R1 1 EDIFYTSK 8 0 S4R3D5;S4R3Z2;A0A0A0MSS8;P42330;P52895-2;P17516;H0Y804;Q04828;A6NHU4;B4DK69;P52895;S4R3P0 S4R3D5;H0Y804 AKR1C3;AKR1C2;AKR1C4;AKR1C1 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1 0 98.904 0.021932 386670000.0 792130.0 1017700.0 828810.0 640010.0 1064200.0 811860.0 864330.0 926130.0 1015700.0 846960.0 False True 748188.9698279946 968808.1644011558 882236.4187428866 700836.3579739775 1147946.4855302803 806792.8805958229 951704.9114478995 922917.4711903668 831274.4837133618 839456.5933249082 0.891277733449657 1.1540896481185687 1.0509613311255759 0.8348690850090467 1.367487604074333 0.9610894559780497 1.1337154523718729 1.099422505617459 0.9902530879182939 1.0 19.679096202560505 -4.242060510435853 23.13772404569982 1.069475304607144 0.8912772817508586 0.13209079536035595 0.13387601503808091 3156.6119217307164 3768724.670280508 0.0315959843944619 1.020603795805503 5.727162286295012e-05 4.242060510435853 -0.17819802285628528 EDKEEEKEKEEK ddPTM_KYSE-520_SHP099_60min_R1 5 EDKEEEKEKEEK 12 3 P07900;P07900-2;Q14568 P07900 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 ;;;; 117.08 7.3607e-05 9720630000.0 13220390.0 13889380.0 6665250.0 8791040.0 12965060.0 15885560.0 11732120.0 16231550.0 11710190.0 10773280.0 False True 12487028.612505928 13222113.336415576 7094902.679777063 9626537.798477445 13985336.460899502 15786412.327590723 12918117.184057163 16175246.541522264 9583914.685867248 10677837.120685 1.1694342657012609 1.2382763650516666 0.6644512928590087 0.901543794841093 1.3097536797791425 1.4784279015653312 1.2098065402245475 1.5148429741625986 0.8975520583004009 1.0 23.348116111680014 -5.767341051319348 24.999637446046997 1.271711376293214 0.9874174759758122 0.1997068926967106 0.22993220693050173 201.37622210828806 853033.6813359887 0.07118947650726383 0.08284777841223592 1.7086729677453809e-06 5.767341051319348 -0.28429390031740176 EDKEKEEEEEEKPK ddPTM_KYSE-520_SHP099_60min_R1 2 EDKEKEEEEEEKPK 14 3 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;E9PGZ1;C9J813;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 0 ; 106.52 0.00027491 1983290000.0 1785880.0 1657160.0 1164090.0 1076560.0 1466120.0 1721890.0 1383600.0 1781470.0 1635050.0 1332960.0 False True 1686813.6763364838 1577547.54615213 1239129.1040098537 1178875.938720434 1581495.3029182998 1711143.0458073362 1523467.7906347257 1775290.4963682245 1338166.1362563097 1321151.0114271888 1.2767758278550487 1.1940705736946498 0.9379163269695189 0.8923097575703625 1.1970586929422027 1.2951911106353042 1.153136755342587 1.3437453258658496 1.012879015859618 1.0 20.33336394959963 EDKHECPFGR ddPTM_KYSE-520_SHP099_60min_R1 2 EDKHECPFGR 10 1 H7C0S6;Q5JVZ8;H0YCM7;Q5JVZ5;Q92556-3;Q96JJ3-3;Q96JJ3;Q92556 H7C0S6 ELMO1;ELMO2 Engulfment and cell motility protein 1;Engulfment and cell motility protein 2 0 ; 98.898 0.0022914000000000003 735840000.0 1463810.0 1417850.0 948540.0 852850.0 1390880.0 1339200.0 1009400.0 1142660.0 1137240.0 1022140.0 False True 1382609.5412671082 1349734.3577637628 1009684.4061176602 933904.607581298 1500334.342975341 1330841.5560489846 1111440.0027946604 1138696.3791588487 930745.8834874303 1013084.6348128871 1.3647522563822825 1.332301676861434 0.9966436874290815 0.9218426333687182 1.4809565671208182 1.3136528877419862 1.0970850456141201 1.123989388477066 0.9187247062130555 1.0 19.9503232736946 -7.400803550296556 1.82620957546919 0.967483097137683 1.2203273888324329 0.278978186767582 0.16343408700618434 0.5615323822516219 3.371931536295889 0.14557212542861642 0.051557798431954176 3.973712565938245e-08 7.400803550296556 0.25284429169474987 EDKLECSEELGDLVK ddPTM_KYSE-520_SHP099_60min_R1 5 EDKLECSEELGDLVK 15 1 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 ;;;; 191.44 4.7536e-11 2576170000.0 5218500.0 4591430.0 3121830.0 3148290.0 5043030.0 5038230.0 4108460.0 4511680.0 3950600.0 4518020.0 False True 4929019.402178154 4370850.810923071 3323068.1569046048 3447502.5350320926 5439887.770084363 5006784.537733478 4523783.231505602 4496030.035114029 3233270.6265216162 4477993.857766375 1.100720447311366 0.9760734270196728 0.7420885920022571 0.7698765662782102 1.2148046520094562 1.1180865130151973 1.0102254212921289 1.0040277360622936 0.7220355206414626 1.0 22.09442111864553 -4.285399349633324 5.198579420511364 0.953461926048609 1.1050145122319828 0.07993133846280653 0.15346097263822134 0.4466496779363429 36.772773438144725 0.041390709012882644 0.221570087518207 5.1832320261823376e-05 4.285399349633324 0.15155258618337375 EDKNGHDGDTHQEDDGEKS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 4 EDKNGHDGDTHQEDDGEKSD 20 2 K7EQH5;Q08117;Q08117-2 K7EQH5 AES Amino-terminal enhancer of split 1 EDKNGHDGDTHQEDDGEKS(1)D;EDKNGHDGDTHQEDDGEKS(1)D;EDKNGHDGDTHQEDDGEKS(1)D;EDKNGHDGDTHQEDDGEKS(1)D 314.7 9.0554e-54 3421540000.0 1797160.0 1684890.0 1682950.0 1566390.0 1601960.0 1467590.0 1342990.0 1390650.0 2125020.0 1141520.0 True False 1697467.9522503589 1603945.3553285513 1791435.6498152066 1715259.2346476729 1728025.138094429 1458430.226435131 1478752.5355193196 1385826.1597301504 1739169.9353948692 1131407.0208891209 1.5003159083425137 1.4176554729774296 1.5833697482338402 1.5160408261385274 1.5273240365226417 1.289041166890601 1.3070031458327311 1.2248696836272883 1.5371744237791058 1.0 20.109686598017483 -6.264821667728654 23.45154189811224 1.2878836045585078 1.5083991226287299 0.4600637523309071 0.12794429610439653 120.50238431862492 835513.8472136836 0.04165082661456571 0.038284332894061066 5.43473449590358e-07 6.264821667728654 0.22051551807022207 EDKPIQCT(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 1 EDKPIQCTPQK 11 1 Q5VYS8-4;Q5VYS8-6;Q5VYS8;A0A0C4DFW3;X6R3Q3 Q5VYS8-4 ZCCHC6 Terminal uridylyltransferase 7 1 EDKPIQCT(1)PQK 76.322 0.042664 507050000.0 922240.0 835270.0 740480.0 750200.0 752270.0 812740.0 576960.0 714120.0 935430.0 771710.0 True False 871081.5087601382 795142.37543417 788212.5256098906 821498.7824441446 811469.3691692025 807667.3881894045 635284.7473869697 711642.8843968605 765579.4922713308 764873.2497812944 1.1388573322563087 1.0395740414003636 1.0305139130375782 1.0740325703363813 1.060920053618337 1.05594932025711 0.8305751934305733 0.9304062922848271 1.0009233457834201 1.0 19.544861167258425 -6.639924740933613 9.985484035899605 0.9348216430652044 1.0646008294118257 0.5861163671128218 0.05188091931028099 0.2142620509439393 17.743065773828967 0.019698247950767554 0.015244093857966915 2.291264672548558e-07 6.639924740933613 0.12977918634662122 EDKS(ph)DQS(ph)DDEKIQNS(ph)DDEER ddPTM_KYSE-520_SHP099_60min_R1 4 EDKSDQSDDEKIQNSDDEER 20 2 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 3 EDKS(1)DQS(1)DDEKIQNS(1)DDEER;EDKS(1)DQS(1)DDEKIQNS(1)DDEER;EDKS(1)DQS(1)DDEKIQNS(1)DDEER;EDKS(1)DQS(1)DDEKIQNS(1)DDEER 145.67 9.8053e-07 1911880000.0 2829650.0 2487940.0 2181270.0 2674970.0 2545160.0 2511980.0 2642460.0 2885920.0 2994400.0 2511860.0 True False 2672683.6737325727 2368415.627925926 2321878.154355397 2929198.3445409453 2745449.612020534 2496301.8010483333 2909585.6447243677 2875909.4170987913 2450692.442681195 2489606.8745975113 1.0735364289852627 0.9513211310957767 0.9326284314389072 1.1765706362834902 1.1027643119214894 1.0026891500498063 1.1686928062466704 1.155166081216631 0.9843692462800548 1.0 21.247486518506918 -5.249850911674344 24.993923390320514 1.0916695453888134 0.9823779116897252 0.25974567226783873 0.07541834723994784 934.7621315951658 2016084.6383786967 0.02028559247158747 0.03477118761365583 5.625344036708822e-06 5.249850911674344 -0.10929163369908823 EDKS(ph)PETGTAGGSSTASYSAGR ddPTM_KYSE-520_SHP099_60min_R1 3 EDKSPETGTAGGSSTASYSAGR 22 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EDKS(0.972)PET(0.028)GTAGGSSTASYSAGR;EDKS(0.961)PET(0.039)GTAGGSSTASYSAGR;EDKS(0.991)PET(0.008)GT(0.001)AGGSSTASYSAGR 208.58 1.8059999999999998e-19 827090000.0 213846.0 188820.0 189605.0 165604.0 193178.0 200690.0 192423.0 209185.0 225681.0 199273.0 True False 201983.53608856758 179748.803775402 201827.2416787262 181342.9543693419 208380.00956753295 199437.4192678246 211874.99470750656 208459.38605914626 184703.01935504097 197507.59625204813 1.0226621148829511 0.9100855217032596 1.0218707812187922 0.9181568598400751 1.0550480767413626 1.0097708799681493 1.0727435234294662 1.055449967570473 0.9351691927804808 1.0 17.591548615647618 -5.774416096820141 24.999924458764472 1.0261254626688652 0.9678772861511064 0.21126260848150036 0.049821117506200656 321.38474439050606 619152.2033992489 0.014737976269346392 0.016811600291893346 1.6810626659144795e-06 5.774416096820141 -0.05824817651775882 EDKS(ph)PSEESAPTTSPESVSGSVPSSGSSGR ddPTM_KYSE-520_SHP099_60min_R1 6 EDKSPSEESAPTTSPESVSGSVPSSGSSGR 30 1 P54725-2;P54725-3;P54725;A0A494C0B4 P54725-2 RAD23A UV excision repair protein RAD23 homolog A 1 EDKS(0.749)PS(0.187)EES(0.063)APTTSPESVSGSVPSSGSSGR;EDKS(0.933)PS(0.065)EES(0.002)APTTSPESVSGSVPSSGSSGR;EDKS(0.984)PS(0.016)EESAPTTSPESVSGSVPSSGSSGR;EDKS(0.813)PS(0.186)EES(0.001)APTTSPESVSGSVPSSGSSGR;EDKS(0.743)PS(0.251)EES(0.007)APTTSPESVSGSVPSSGSSGR;EDKS(0.877)PS(0.115)EES(0.008)APTTSPESVSGSVPSSGSSGR 267.56 1.8625999999999996e-41 11424660000.0 2668319.0 2515776.0 1993389.0 2106038.0 2198023.0 2320343.0 2295088.0 2551167.0 2864050.0 2405701.0 True False 2520302.025907945 2394914.3447032394 2121886.04447517 2306195.218316586 2370994.9050598834 2305860.8786494667 2527097.8929403517 2542317.5971238557 2344010.716825101 2384388.360747059 1.057001479875662 1.0044145425843642 0.889907902339515 0.9672062052819391 0.9943828547783302 0.967065984975288 1.059851630943451 1.066234695226962 0.9830658274521575 1.0 21.185187805330905 -6.750436319172227 24.91540045140826 1.0328075979826083 0.9770840122590433 0.20115629574426497 0.04542020754665826 304.1416346002403 688700.5426783368 0.018300878488188763 0.014039566059603902 1.776493737400522e-07 6.750436319172227 -0.05572358572356506 EDKSPSEES(ph)APTTSPESVSGSVPSSGSSGR ddPTM_KYSE-520_SHP099_60min_R1 1 EDKSPSEESAPTTSPESVSGSVPSSGSSGR 30 1 P54725-2;P54725-3;P54725;A0A494C0B4 P54725-2 RAD23A UV excision repair protein RAD23 homolog A 1 EDKS(0.312)PS(0.312)EES(0.376)APTTSPESVSGSVPSSGSSGR 70.67 0.0054568 2614100000.0 590070.0 590010.0 507850.0 540180.0 485730.0 541950.0 550370.0 685770.0 732740.0 617210.0 True False 557337.6408246169 561665.0339769351 540586.82358873 591518.5447889607 523954.1875743502 538567.4890238547 606006.770693577 683391.2239299216 599692.8868722349 611741.9995821132 0.9110664973229556 0.918140383299845 0.8836843374461946 0.9669412026524787 0.8564953655826612 0.8803833795811883 0.9906247586524155 1.1171232715699635 0.9803036039406985 1.0 19.222563803167002 -6.924094590619252 4.7137037332484 1.039805176146366 0.9040305094654847 0.6520754263972377 0.04326542847186427 0.11639704635638716 4.798554525859074 0.01814144587286407 0.011908151085572404 1.1909825802571603e-07 6.924094590619252 -0.13577466668088134 EDKSPSEESAPTTS(ph)PESVSGSVPSSGSSGR ddPTM_KYSE-520_SHP099_60min_R1 1 EDKSPSEESAPTTSPESVSGSVPSSGSSGR 30 1 P54725-2;P54725-3;P54725;A0A494C0B4 P54725-2 RAD23A UV excision repair protein RAD23 homolog A 1 EDKSPSEES(0.001)APT(0.023)T(0.127)S(0.789)PES(0.015)VS(0.014)GS(0.016)VPS(0.003)S(0.004)GS(0.004)S(0.004)GR 51.845 0.034167 0.0 89954.0 63120.0 54423.0 64879.0 54919.0 64170.0 55500.0 69741.0 83003.0 70924.0 True False 84964.07230114675 60087.62045494846 57931.19365987882 71045.08065341724 59240.8128536342 63769.491227347105 61110.481627802284 69499.08474867181 67931.74753535514 70295.66853803712 1.2086672488956063 0.854784109812327 0.8241075853561609 1.0106608576455123 0.8427377402574795 0.9071610321600585 0.8693349519072471 0.9886680956887938 0.9663717402246078 1.0 16.10114817594237 -9.920162816536282 6.4577306804173755 1.0000000071469712 0.9327921899609141 0.02030144041151416 0.10821805101533467 1.0787385354478558e-08 1.8671822096649417e-09 0.10114781037958508 0.02453194485258792 1.2018137914461965e-10 9.920162816536282 -0.06720781718605717 EDLAAATPAS(ph)PLVLLPLETR ddPTM_KYSE-520_SHP099_60min_R1 2 EDLAAATPASPLVLLPLETR 20 0 A0A1B0GTL5 A0A1B0GTL5 1 EDLAAAT(0.004)PAS(0.996)PLVLLPLETR;EDLAAAT(0.004)PAS(0.996)PLVLLPLETR 103.5 0.00058931 36903000.0 36966.4 46387.0 35598.0 36599.6 34390.1 66325.0 48523.0 77394.0 74728.0 77180.0 True False 34915.80010130856 44158.49889169349 37892.70403881385 40078.014979929016 37096.40521709728 65911.04107299048 53428.17837884417 77125.53827789538 61159.27893958071 76496.24524513149 0.45643809038497524 0.5772636127458021 0.49535377739635506 0.5239213356354864 0.48494413154818516 0.8616245262990253 0.6984418412646801 1.0082264564848553 0.7995069397667348 1.0 16.223101315600882 -6.458377875053317 1.3453854218170016 0.9093871558941691 0.5022516709633106 0.7839215858759048 0.09454265668770083 0.18772980677567233 0.6897138023996492 0.04620422867193404 0.0352911501157364 3.480343622251454e-07 6.458377875053317 -0.4071354849308585 EDLAYMNHIMVSVS(ph)PPEEHAMPIGR ddPTM_KYSE-520_SHP099_60min_R1 3 EDLAYMNHIMVSVSPPEEHAMPIGR 25 0 P41212 P41212 ETV6 Transcription factor ETV6 1 EDLAYMNHIMVS(0.007)VS(0.993)PPEEHAMPIGR;EDLAYMNHIMVS(0.004)VS(0.996)PPEEHAMPIGR;EDLAYMNHIMVS(0.099)VS(0.901)PPEEHAMPIGR 265.45 1.4082e-37 1765170000.0 531120.0 576840.0 517298.0 504856.0 496431.0 541997.0 496053.0 549580.0 650540.0 518634.0 True False 501657.7148385286 549127.7405455075 550643.8567860645 552837.3624495086 535497.2953939897 538614.1956794214 546198.8782507426 547673.6352529363 532418.3347788625 514039.3062511459 0.975913142707091 1.068260216422474 1.071209633368065 1.0754768277961355 1.041743868381069 1.047807413031308 1.0625624764653394 1.0654314341194708 1.0357541306748577 1.0 18.97151915441139 -4.255675083806357 24.866172999540918 1.055280302127037 0.9759131056133764 0.5233270900271272 0.021592729595804834 422.4907474266883 1822496.9155001487 0.0050789315516909265 0.04276742472866595 5.550408098806448e-05 4.255675083806357 -0.07936719651366053 EDLESMDKEVDDILGEGS(ph)DDS(ph)DSEK ddPTM_KYSE-520_SHP099_60min_R1 4 EDLESMDKEVDDILGEGSDDSDSEK 25 1 A0A0A0MR03;Q9Y5B0 A0A0A0MR03 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 2 EDLESMDKEVDDILGEGS(1)DDS(0.996)DS(0.004)EK;EDLESMDKEVDDILGEGS(1)DDS(1)DSEK;EDLESMDKEVDDILGEGS(1)DDS(0.995)DS(0.005)EK;EDLESMDKEVDDILGEGS(1)DDS(0.983)DS(0.017)EK 280.03 4.7965e-39 2696350000.0 1735950.0 1652540.0 1426480.0 1555370.0 1627240.0 1710690.0 1495440.0 1695830.0 2025170.0 1551280.0 True False 1639653.3929694707 1573149.4978868891 1518433.1832486996 1703191.8971609569 1755294.5302709055 1700012.9491617642 1646613.6692879389 1689947.5615396982 1657450.1783812027 1537536.8660775758 1.066415660752516 1.0231621319755182 0.9875751383590484 1.107740526252216 1.1416276051636103 1.1056729673732524 1.0709425611944057 1.099126530767967 1.0779905281943183 1.0 20.5521895722116 -5.273843286502334 24.838844130058614 1.0927779943574443 1.0254620912953676 0.325818203410847 0.039035708779710375 691.8474413910311 1385423.4648538528 0.010815145973097118 0.01616742887859401 5.323003031378318e-06 5.273843286502334 -0.06731590306207669 EDLESMDKEVDDILGEGS(ph)DDS(ph)DSEKR ddPTM_KYSE-520_SHP099_60min_R1 2 EDLESMDKEVDDILGEGSDDSDSEKR 26 2 A0A0A0MR03;Q9Y5B0 A0A0A0MR03 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 2 EDLESMDKEVDDILGEGS(1)DDS(0.951)DS(0.049)EKR;EDLESMDKEVDDILGEGS(1)DDS(0.998)DS(0.002)EKR 127.77 9.5831e-05 623360000.0 1309250.0 1054390.0 992720.0 1159470.0 1028410.0 1181120.0 1090840.0 1121550.0 1423950.0 1139430.0 True False 1236623.2925748294 1003735.5217283439 1056712.3196081596 1269665.680192634 1109340.0161475253 1173748.1919657819 1201112.7527724674 1117659.6048217367 1165396.5748583637 1129335.536663125 1.0950007791561311 0.8887841470871496 0.9356938529805349 1.1242590346037864 0.9822944378650468 1.0393263594926658 1.0635570331218163 0.9896612375486851 1.0319311993863127 1.0 20.107042757968994 -5.201161254539232 24.99967657372468 1.0319976868379936 0.9647220337856243 0.15963498171569535 0.06199216758221044 397.4953096910935 164855.55235513402 0.01612475524455796 0.02792889454963382 6.292724891529524e-06 5.201161254539232 -0.06727565305236938 EDLESMDKEVDDILGEGS(ph)DDSDS(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 1 EDLESMDKEVDDILGEGSDDSDSEK 25 1 A0A0A0MR03;Q9Y5B0 A0A0A0MR03 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 2 EDLESMDKEVDDILGEGS(1)DDS(0.422)DS(0.578)EK 167.56 1.9374000000000002e-10 88798000.0 206830.0 215910.0 187410.0 190660.0 207400.0 206070.0 185830.0 198630.0 260070.0 203820.0 True False 195356.72759461688 205537.3595124827 199490.74846660232 208780.26907598056 223721.2000554224 204783.84069221446 204615.50992602715 197940.99889059062 212847.84383118447 202014.31336956055 0.9670439897851969 1.0174395867508514 0.9875079896029858 1.0334924570124024 1.107452221200543 1.0137095598646388 1.0128762982834194 0.9798365055870161 1.0536275389645549 1.0 17.624097990659983 -4.077936254822297 1.1527133706069819 1.027054512862823 0.924302757106339 0.2001240139236946 0.034473780430896835 4.093145635493987 3.4823679142082935 0.011157342915074156 0.5592390674775453 8.35725675954129e-05 4.077936254822297 -0.10275175575648399 EDLKPWEKS(ph)PILK ddPTM_KYSE-520_SHP099_60min_R1 2 EDLKPWEKSPILK 13 2 E9PDR5;Q9P2D0-2;Q9P2D0;E7EPI0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 1 EDLKPWEKS(1)PILK;EDLKPWEKS(1)PILK 117.65 7.2665e-05 1586600000.0 3012200.0 2643600.0 2452900.0 2399400.0 2710900.0 2587800.0 2409600.0 2603500.0 3370200.0 2684800.0 True False 2845107.261328168 2516597.487875499 2611017.858778762 2627438.254594088 2924232.40708893 2571648.5803043284 2653185.8834297718 2594469.0661614705 2758256.63582827 2661014.760742792 1.069181315076204 0.9457284961369471 0.9812113398611612 0.987382066930237 1.098916266917912 0.9664165032990956 0.9970579354055011 0.9749923617249135 1.0365431550850677 1.0 21.34354508238681 -4.2241106276006395 23.246105434118665 0.9990850298191452 1.0691817479549195 0.21495961224194704 0.040404667156774876 13604.79622652479 8471856.36484867 0.010094322563510652 2.205141298394812 5.9688322347353246e-05 4.2241106276006395 0.07009671813577434 EDLPAENGETKTEES(ph)PAS(ph)DEAGEK ddPTM_KYSE-520_SHP099_60min_R1 1 EDLPAENGETKTEESPASDEAGEK 24 1 A6NEL0;P05114;A6NL93 A6NEL0 HMGN1 Non-histone chromosomal protein HMG-14 2 EDLPAENGETKT(0.004)EES(0.996)PAS(1)DEAGEK 92.289 0.00097523 430350000.0 819350.0 776520.0 687900.0 772830.0 775930.0 739650.0 765600.0 888520.0 935380.0 804760.0 True False 773899.0221662698 739214.8136197164 732243.1346789157 846279.5308401885 836991.2765622166 735033.5699907637 842994.3195359543 885437.9315021271 765538.5710109321 797630.4524938066 0.9702475873967199 0.9267635297881963 0.9180230423619657 1.0609920022414887 1.0493471932338436 0.9215214485513529 1.056873288752099 1.1100854145347494 0.9597659776121402 1.0 19.60536096544564 -5.254920179224184 24.79861724045086 1.0255659720751498 0.9371865964206304 0.3523462818192832 0.052270134569140266 520.335975434162 1979317.8504974884 0.014546176244033019 0.024472737110369 5.560064385987771e-06 5.254920179224184 -0.08837937565451937 EDLRLPEGDLGK ddPTM_KYSE-520_SHP099_60min_R1 14 EDLRLPEGDLGK 12 1 I3L397;I3L504;P63241;P63241-2 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 0 ;;;;;;;;;;;;; 186.16 1.1364e-07 53064240000.0 59199130.0 57725030.0 39387670.0 33472770.0 57217020.0 57668890.0 41538070.0 47259180.0 47991580.0 47954010.0 False True 55915236.24836015 54951832.91176346 41926662.23070021 36654011.9968447 61719673.95368903 57308957.066321455 45737143.48809672 47095248.93495548 39277518.841280356 47529174.77905529 1.1764402918478685 1.15617056612519 0.8821247670636195 0.7711897411902268 1.2985639712997306 1.205763772098476 0.9622961833591888 0.9908703265706387 0.8263875614055223 1.0 25.5023100174087 -6.971766210325542 24.963376575556744 0.9404939486701006 1.0727862307128042 0.16154729261918688 0.15256702784774323 451.58180812550864 399272.8257301166 0.06979935716171723 0.047057853098626014 1.06717044648648e-07 6.971766210325542 0.1322922820427036 EDLRLPEGDLGKEIEQK ddPTM_KYSE-520_SHP099_60min_R1 1 EDLRLPEGDLGKEIEQK 17 2 I3L397;I3L504;P63241;P63241-2 I3L397 EIF5A Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1 0 131.67 2.0513e-05 623030000.0 1037100.0 1390400.0 1071000.0 563330.0 1001300.0 859460.0 523170.0 515680.0 1137600.0 717090.0 False True 979569.9955924053 1323603.0969670508 1140038.3736605875 616868.713828659 1080096.6133823255 854095.7913395012 576057.1292471596 513891.2264406165 931040.5165622921 710737.1404875779 1.3782451201584927 1.862296229600491 1.6040225122870342 0.867928068885603 1.519685059150505 1.2017041782192173 0.8105065803258494 0.7230397810477137 1.3099646318237743 1.0 19.438956565599362 -5.5349027808652265 0.7843513792099113 0.9671998440698197 1.685540550607178 0.42663569788278133 0.26981580448609455 0.7258445888649542 0.9010794131433544 0.1434548347713502 0.33436704659168837 2.9180801686928993e-06 5.5349027808652265 0.7183407065373582 EDLSGIAEMFKT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 4 EDLSGIAEMFKTPVK 15 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 EDLSGIAEMFKT(1)PVK;EDLSGIAEMFKT(1)PVK;EDLSGIAEMFKT(1)PVK;EDLSGIAEMFKT(1)PVK 214.19 1.1017999999999999e-13 2011720000.0 2514590.0 2210850.0 1844970.0 1935010.0 1794340.0 2300770.0 2105000.0 2791520.0 2552250.0 2718650.0 True False 2375100.6799891093 2104637.447446496 1963899.7182563734 2118912.7686180314 1935544.3496019621 2286410.0410027015 2317793.9428202477 2781836.8686656673 2088825.7369867368 2694564.8760776944 0.8814412675958248 0.7810676469998682 0.7288374222093685 0.7863654675490305 0.7183142505811217 0.8485266253195144 0.8601737384011745 1.0323881578665157 0.7751996456018928 1.0 21.36162089172406 -6.732268004758756 2.298470924146496 0.927901779250079 0.7780148358489573 0.4188575974855866 0.07718289000973586 0.2818899911858671 3.046686811792146 0.03481124666479191 0.023345971053157593 1.8523881549319806e-07 6.732268004758756 -0.14988694340112174 EDLSKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 EDLSKSPK 8 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5 B1ALK7 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 EDLS(0.012)KS(0.988)PK 67.153 0.017293 630280000.0 670170.0 786040.0 810960.0 454930.0 569870.0 556180.0 431000.0 436100.0 995820.0 528470.0 True False 632994.334149227 748277.4585299068 863235.7791818782 498166.41042030853 614715.5268832379 552708.6743155047 474569.68615464465 434587.2708865054 815004.190579344 523788.166943439 1.2084930017473658 1.4285879402287245 1.6480627735813174 0.9510837431233966 1.1735956741260587 1.0552141289117527 0.9060336145506908 0.829700436767282 1.555980531853733 1.0 18.998623942134387 -5.272418251429629 24.954817806534955 1.057473671279319 1.4284019152849565 0.37861755803147445 0.21167102300237772 693.4527716464185 1576207.23920984 0.05881499484808869 0.08819023050686615 5.340497899288381e-06 5.272418251429629 0.3709282440056376 EDLSPAFDHS(ph)PNK ddPTM_KYSE-520_SHP099_60min_R1 10 EDLSPAFDHSPNK 13 0 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-3;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 EDLSPAFDHS(1)PNK;EDLSPAFDHS(1)PNK;EDLSPAFDHS(1)PNK;EDLSPAFDHS(1)PNK;EDLSPAFDHS(1)PNK;EDLSPAFDHS(1)PNK;EDLSPAFDHS(1)PNK;EDLSPAFDHS(1)PNK;EDLSPAFDHS(1)PNK;EDLSPAFDHS(1)PNK 256.96 5.420599999999999e-22 11940410000.0 11508400.0 10602130.0 10040800.0 10966330.0 11076640.0 10727410.0 10453640.0 10767980.0 12014430.0 10781360.0 True False 10870006.110573381 10092787.760678438 10688046.03384803 12008566.70605265 11948308.55053951 10660456.255059307 11510395.94889477 10730628.390645422 9832912.371133517 10685845.538171142 1.0172340664802233 0.9445006223069359 1.0002059262104275 1.1237825460939508 1.1181434831580428 0.9976240267537893 1.0771628607000012 1.0041908571777787 0.9201810316281623 1.0 23.349197732758018 -9.66669728888 7.889818874474884 0.999999943531706 1.0257260759933597 0.0089934101076099 0.06365218386247301 0.0 0.0 0.06611328957127355 0.01603482800937691 2.154282785654581e-10 9.66669728888 0.025726132461653783 EDLVGPEVGAS(ph)PQSGR ddPTM_KYSE-520_SHP099_60min_R1 1 EDLVGPEVGASPQSGR 16 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 EDLVGPEVGAS(0.977)PQS(0.023)GR 73.208 0.016952000000000002 381130000.0 363750.0 334570.0 325180.0 260230.0 308780.0 396250.0 297880.0 421590.0 375040.0 337870.0 True False 343572.06238235196 318496.755000192 346141.623106396 284962.1809589972 333079.2292821278 393776.856768526 327992.61742864427 420127.602689846 306942.1899890314 334876.7346588826 1.0259657564217672 0.9510865403194526 1.0336389103261778 0.850946487068652 0.9946323372431776 1.1758859783724336 0.9794428321894301 1.2545738751239408 0.9165826055419874 1.0 18.35327062367292 -6.017423178215279 24.177772081214176 1.0768883968673735 0.9634510887053406 0.17512852521165478 0.10204050281080242 713.892535158666 990653.3308361542 0.030950091162978203 0.03165373139241166 9.606757360365616e-07 6.017423178215279 -0.1134373081620329 EDLVGPEVGAS(ph)PQSGRK ddPTM_KYSE-520_SHP099_60min_R1 1 EDLVGPEVGASPQSGRK 17 1 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 EDLVGPEVGAS(0.983)PQS(0.017)GRK 96.016 0.00080911 4964500000.0 886630.0 776010.0 717800.0 566010.0 704630.0 661970.0 637600.0 703410.0 756860.0 678350.0 True False 837446.8664469133 738729.3147852434 764070.5365206078 619803.4202228877 760080.3722037233 657838.3996846959 702054.8303763383 700970.0348871285 619433.3028879538 672340.3467483142 1.2455698523777654 1.0987430969419145 1.1364341590028542 0.9218596254419142 1.1304994202411802 0.9784306458272881 1.044195597916642 1.0425821360822358 0.9213091344045641 1.0 19.358832201883946 -1.0000000000000855 0.5217394766409869 1.0031493117195684 9.860656727288772 0.5679924573544665 0.06413990915868965 84.48963434688069 0.8456097961435873 0.03173581163514868 828.5889851907822 0.09999999999998031 1.0000000000000855 8.857507415569204 EDLYEAADKWVAAVGK ddPTM_KYSE-520_SHP099_60min_R1 1 EDLYEAADKWVAAVGK 16 1 Q9H7Z7;A6NHH0 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form 0 172.2 3.5287000000000004e-08 199530000.0 871240.0 726690.0 467620.0 588880.0 822960.0 725280.0 603710.0 611040.0 588750.0 505510.0 False True 822910.5804261188 691778.7216160723 497763.53341845423 644846.9781467722 887722.2699981214 720753.2584910444 664738.8984418109 608920.4448578076 481847.8411797202 501031.57468082855 1.6424325771291688 1.3807088346812377 0.9934773746256288 1.2870386034204695 1.7717890744982008 1.4385385969939817 1.3267405329998785 1.2153334752319898 0.9617115278346899 1.0 18.934541998416318 -7.5050335685193295 2.012307428460534 0.9736607513957131 1.4039512452120755 0.43028736815167934 0.19565992638882582 0.37312316159231573 2.7406842191713188 0.1821692928151245 0.060275028176960295 3.125837748119835e-08 7.5050335685193295 0.4302904938163624 EDMAALEK ddPTM_KYSE-520_SHP099_60min_R1 7 EDMAALEK 8 0 Q9BQE3;F5H5D3;P68363;P68366-2;P68366;P68363-2;Q71U36-2;Q71U36 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1B;TUBA4A;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain 0 ;;;;;; 125.96 0.0070675 5675810000.0 7468880.0 9633200.0 7174410.0 5126870.0 8265220.0 9308970.0 6563140.0 7926520.0 8213520.0 8559430.0 False True 7054566.337556851 9170406.612272017 7636883.948061869 5614126.183350328 8915645.791331133 9250869.265242916 7226606.241273774 7899024.752183666 6722151.813989741 8483600.10933577 0.8315533790652933 1.0809569633274498 0.9001937679332463 0.6617622366679292 1.050927162575699 1.0904414571666108 0.8518324942404182 0.93109348040712 0.7923701880516921 1.0 23.01624518761425 -11.639075434860354 2.1907686234191983 3.113487645028406 0.9159000348118058 0.039951025845752275 0.12941522652982307 3932564.756448873 851900.459068113 40849696.6475556 0.03347045164338352 2.295749852783688e-12 11.639075434860354 -2.1975876102166003 EDNPEEPSKEITSHEEGGGDVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 EDNPEEPSKEITSHEEGGGDVSPR 24 1 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 EDNPEEPSKEITSHEEGGGDVS(1)PR 126.36 5.469500000000001e-09 0.0 231470.0 192240.0 208830.0 196340.0 204950.0 162060.0 179030.0 203940.0 248130.0 195740.0 True False 218629.8976759949 183004.50184187715 222291.5159398138 215000.09456822657 221078.3989940156 161048.5234268952 197128.09956442245 203232.57973995386 203075.84684827845 194005.89588341542 1.1269239869255152 0.9432935066666769 1.1457977342781178 1.1082142302387927 1.1395447441807074 0.8301217996162066 1.0160933443119855 1.0475587806985158 1.0467509037473453 1.0 17.565740971346713 EDNS(ph)EGEEILEEVGGDLEEEDDHHMEFCR ddPTM_KYSE-520_SHP099_60min_R1 25 EDNSEGEEILEEVGGDLEEEDDHHMEFCR 29 0 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR 219.76 1.2658e-22 6015812000.0 1628682.0 1611759.0 1460855.0 1667894.5 1586519.1 1440212.0 1413749.2 1708563.0 1971955.0 1603579.0 True False 1538335.762762925 1534327.6783404201 1555024.0507506425 1826410.6918092337 1711369.1271111318 1431223.102688485 1556664.7659985614 1702636.3937346025 1613897.6809402192 1589372.537625584 0.9678887273723097 0.9653669243792288 0.9783886495696875 1.1491394550819212 1.0767577056967415 0.9004956791480972 0.9794209533304974 1.0712632522757861 1.0154307078636668 1.0 20.600025891110583 -5.027180638303027 24.950973735626317 1.0281918805146468 0.9679402479222929 0.15195705053095532 0.062041337606149514 1374.055322410741 1261340.3183981783 0.018333588724319436 0.0318710486990986 9.393325279652553e-06 5.027180638303027 -0.06025163259235389 EDPDGEHAR ddPTM_KYSE-520_SHP099_60min_R1 2 EDPDGEHAR 9 0 A0A087X0X3;P52272-2;P52272;M0R2T0;M0QYQ7;M0R0N3;M0R019 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 ; 114.89 0.0034306 54923000.0 419800.0 383760.0 241430.0 250410.0 397930.0 419130.0 312150.0 378160.0 353160.0 419590.0 False True 396512.85714944714 365323.59356449626 256992.96410165797 274208.8911114879 429244.8270880146 416514.0542016206 343705.16829042346 376848.25122320786 289035.046439117 415872.7590360801 0.9534475354156261 0.8784504049057026 0.6179605624983047 0.6593576644622164 1.0321542292958275 1.0015420465794078 0.8264671364555629 0.9061623850926803 0.6950083653208 1.0 18.665782661487256 -5.758169994523988 24.99918769298086 0.9059086959640672 0.7731471277735672 0.20339897530207307 0.12859036516268046 154.34957718488005 1180215.9012072906 0.0412266068458435 0.05101529258838543 1.7451389249682177e-06 5.758169994523988 -0.1327615681905 EDQDKVHMWEQT(ph)VKKDENEIEK ddPTM_KYSE-520_SHP099_60min_R1 1 EDQDKVHMWEQTVKKDENEIEK 22 3 G8JLG1;Q14683 G8JLG1 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A 1 EDQDKVHMWEQT(1)VKKDENEIEK 44.263999999999996 0.06727999999999999 1958200000.0 814520.0 854430.0 716610.0 715050.0 733030.0 653340.0 643200.0 759730.0 926360.0 689470.0 True False 769336.9518946352 813381.9002744225 762803.8272165408 783008.1370123778 790715.2906298278 649262.2627158323 708220.9330270704 757094.6739523149 758156.3756352366 683361.8321995424 1.1258120012620019 1.1902653352125088 1.1162517297187902 1.145817779275297 1.1570960702981403 0.950100272100428 1.0363776547886991 1.1078972197136734 1.1094508646977728 1.0 19.38229014562487 -6.21464074526097 24.994374298185278 1.047234484259611 1.1476702381555604 0.5524561871176579 0.04765123487342703 355.17273164722144 189691.9244811725 0.016487784536940032 0.016487707646565156 6.100413236705662e-07 6.21464074526097 0.10043575389594928 EDQEAAELLS(ph)EPEEESER ddPTM_KYSE-520_SHP099_60min_R1 3 EDQEAAELLSEPEEESER 18 0 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 1 EDQEAAELLS(1)EPEEESER;EDQEAAELLS(1)EPEEESER;EDQEAAELLS(1)EPEEESER 261.63 8.500000000000001e-30 1510490000.0 1766490.0 1703290.0 1353820.0 1395920.0 1582350.0 1762880.0 1585740.0 1688670.0 1963950.0 1677020.0 True False 1668499.2782894874 1621461.3917095852 1441089.4033885892 1528587.8171013466 1706871.9426600647 1751877.2120128684 1746042.0745310122 1682812.3979085388 1607346.1871505931 1662162.9075018154 1.003812123805118 0.9755129201785622 0.8669964880605514 0.9196377865264552 1.026898106651559 1.0539744354215503 1.050463866478205 1.0124232650804121 0.9670208496990165 1.0 20.664630355961464 -5.767524168312413 24.9733402594367 1.022460169111228 0.9385990939574075 0.45945245707195315 0.04071560625476359 132.23608136871326 542725.9828574931 0.013640801315576054 0.015860333199740995 1.7079526705390935e-06 5.767524168312413 -0.08386107515382057 EDQKMS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 EDQKMSPK 8 1 Q9UHF7;Q9UHF7-3;Q9UHF7-2;H0YC29;E5RJ97;E5RFF3 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 1 EDQKMS(1)PK;EDQKMS(1)PK;EDQKMS(1)PK;EDQKMS(1)PK;EDQKMS(1)PK 110.08 0.0017050999999999998 3423400000.0 4400150.0 3377280.0 3270880.0 3655710.0 3850800.0 3846090.0 3888280.0 3317270.0 4540820.0 3688210.0 True False 4156064.908018442 3215030.399399372 3481726.1583930408 4003147.57927071 4153836.0519451355 3822085.1256753537 4281345.288355873 3305763.1646266375 3716321.5527570215 3655535.328783962 1.1369237428218166 0.8794964650140238 0.952453155349824 1.0950920232529617 1.136314021981272 1.0455609868081335 1.171195161114772 0.9043171156346946 1.016628542335352 1.0 21.801651264046026 -3.9014688163528146 20.22365598385879 1.0271918868217478 11.927040921464522 0.1253932549554242 0.08996746288140572 1352.4135162306852 275301.9054261409 0.02281493690515514 5589.890689946634 0.0001254674824041568 3.9014688163528146 10.899849034642774 EDQTEYLEER ddPTM_KYSE-520_SHP099_60min_R1 1 EDQTEYLEER 10 0 P08238;Q58FF7;Q58FF6;P07900;P07900-2;G3V2J8 P08238;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha 0 157.97 0.00051785 862120000.0 576110.0 690490.0 706580.0 436720.0 559520.0 662750.0 574440.0 587400.0 695610.0 648280.0 False True 544152.029853187 657317.82395338 752127.2773679716 478225.7374953439 603551.0407666826 658613.5314153694 632510.0011941404 585362.4465001901 569304.7589011043 642536.743554208 0.8468807975761768 1.0230042570288045 1.1705591702157931 0.7442776499442294 0.9393253332535118 1.0250208070160038 0.9843950677363533 0.911017855978544 0.8860267752968973 1.0 19.2934194318215 -5.248456256211377 24.99843040847476 0.9304145546551785 1.0144336584475764 0.12778279742815768 0.10310278432447337 1779.1146365232235 3425601.372204045 0.02860442170257342 0.04914419230311601 5.643437813301623e-06 5.248456256211377 0.08401910379239785 EDS(ph)AS(ph)VKSLDLPSIGGSSVGK ddPTM_KYSE-520_SHP099_60min_R1 1 EDSASVKSLDLPSIGGSSVGK 21 1 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 2 EDS(0.677)AS(0.717)VKS(0.605)LDLPSIGGSSVGK 54.141000000000005 0.064827 0.0 138180.0 118510.0 117710.0 101400.0 118510.0 93493.0 97017.0 102580.0 139250.0 102200.0 True False 130514.87994499905 112816.60171286335 125297.77494265913 111037.02551297845 127836.06277033791 92909.47550753261 106824.42515467561 102224.17392235201 113965.71020683825 101294.58751039676 1.2884684478487378 1.1137475800598329 1.2369641658277024 1.0961792553978438 1.2620226402246515 0.9172205326172683 1.0545916398910384 1.0091770590591511 1.1250918040921085 1.0 16.62819756288461 -6.253906421437062 24.99994997002715 1.023875736708539 1.1910576264859793 0.5898844990798988 0.07413546459293778 423.10193728296554 1404167.9408391558 0.0232781385491152 0.022843910353591224 5.573058201317515e-07 6.253906421437062 0.16718188977744042 EDS(ph)GSSDIAAASAPEMLIQHSLWR ddPTM_KYSE-520_SHP099_60min_R1 4 EDSGSSDIAAASAPEMLIQHSLWR 24 0 Q8WUB2 Q8WUB2 FAM216A Protein FAM216A 1 EDS(0.577)GS(0.185)S(0.238)DIAAASAPEMLIQHSLWR;EDS(0.692)GS(0.154)S(0.154)DIAAASAPEMLIQHSLWR;EDS(0.985)GS(0.015)SDIAAASAPEMLIQHSLWR;EDS(0.995)GS(0.005)SDIAAASAPEMLIQHSLWR 232.27 9.259200000000001e-25 260929000.0 111437.0 115436.0 96778.0 124056.0 103267.0 118849.0 118052.0 109816.0 133296.0 120122.0 True False 105255.3674658479 109890.28128703155 103016.46473027485 135846.24494120353 111393.52539114421 118107.21930620189 129985.8482364922 109435.07392724698 109092.80651871237 119057.81253350181 0.8840693880229823 0.922999330733625 0.8652642152423801 1.1410107581388462 0.935625500088867 0.9920157005485681 1.0917876405625655 0.919175916292372 0.9163011162162469 1.0 16.861302767313255 EDS(ph)GTFSLGK ddPTM_KYSE-520_SHP099_60min_R1 10 EDSGTFSLGK 10 0 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 EDS(0.984)GT(0.016)FSLGK;EDS(0.919)GT(0.079)FS(0.002)LGK;EDS(0.954)GT(0.046)FSLGK;EDS(0.73)GT(0.27)FSLGK;EDS(0.537)GT(0.463)FSLGK;EDS(0.87)GT(0.13)FSLGK;EDS(0.914)GT(0.086)FSLGK;EDS(0.873)GT(0.127)FSLGK;EDS(0.853)GT(0.135)FS(0.012)LGK;EDS(0.897)GT(0.101)FS(0.002)LGK 215.71 2.6935e-06 11934480000.0 24495240.0 21312440.0 20921130.0 21243840.0 22086120.0 23663450.0 22390050.0 24623000.0 27464340.0 22443060.0 True False 23136440.207149643 20288558.39177537 22269739.514791533 23262848.166406628 23824171.991167154 23515757.631038927 24653454.759830214 24537588.56005142 22477508.175670188 22244231.948836442 1.040109645519133 0.9120817674640652 1.001146704728388 1.0457923752959009 1.0710269541319613 1.0571620402595647 1.1083077544118036 1.1030989344334245 1.0104870434443545 1.0 24.406927950060176 -5.241731484033002 2.9067114669422343 1.0651565720758436 0.9730118700958207 0.3617969850370736 0.043773696371197074 0.237632786374017 4.038263270417114 0.01222619650067443 0.022015007988090474 5.731502893143863e-06 5.241731484033002 -0.09214470198002289 EDS(ph)LPEESSAPDFANLK ddPTM_KYSE-520_SHP099_60min_R1 2 EDSLPEESSAPDFANLK 17 0 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 EDS(0.999)LPEESSAPDFANLK;EDS(1)LPEESSAPDFANLK 192.4 2.3663e-12 126054000.0 238038.0 225104.0 195299.0 179708.0 163752.0 251829.0 256484.0 317930.0 405060.0 384580.0 True False 224833.55762301155 214289.66595200764 207888.28602944835 196787.3942888196 176638.3507785707 250257.24179977528 282411.90576261707 316827.1750354198 331511.3147316475 381172.9203987126 0.5898466170887278 0.5621849152554106 0.5453910152169101 0.5162680341588196 0.46340739681560883 0.6565451751871629 0.7409023323776777 0.8311901451551538 0.8697137099479199 1.0 18.540086104193087 -7.132152544983601 0.9893274230498939 0.9603886379871958 0.5339387594899092 0.9284903600170814 0.0446905078062275 0.14597062988240914 0.2577627144733157 0.041747594444552234 0.018130270330946385 7.376450884019288e-08 7.132152544983601 -0.42644987849728655 EDS(ph)PERCS(ph)DS(ph)DEEKK ddPTM_KYSE-520_SHP099_60min_R1 1 EDSPERCSDSDEEKK 15 2 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 3 EDS(1)PERCS(1)DS(1)DEEKK 56.718999999999994 0.038581 539140000.0 715750.0 673920.0 593830.0 635790.0 690530.0 739310.0 689020.0 715490.0 746910.0 715280.0 True False 676045.9206877489 641543.8716254575 632109.2319615934 696215.2904427664 744870.78242175 734695.6920568792 758672.8657871778 713008.1321866208 611289.972068866 708943.1756794186 0.953596767526336 0.9049298923156025 0.8916218586289499 0.9820466778251241 1.0506776960056072 1.036325219370058 1.0701462286594416 1.005733825568328 0.8622552456098245 1.0 19.43531046938973 -5.422321576345221 4.7715488840911355 1.0099571332377228 0.9163836987240873 0.33345893568983287 0.05488001827444005 0.2561201324041909 9.364642637644243 0.016500760461464335 0.024673409075726432 3.781624680144242e-06 5.422321576345221 -0.09357343451363553 EDS(ph)TRIGR ddPTM_KYSE-520_SHP099_60min_R1 1 EDSTRIGR 8 1 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 1 EDS(0.864)T(0.136)RIGR 78.939 0.012888 110340000.0 53732.0 58064.0 63037.0 56765.0 54840.0 64158.0 47171.0 49539.0 65494.0 58682.0 True False 50751.378847913555 55274.518284159174 67100.46588276612 62159.928532980455 59155.59600308273 63757.5661237983 51939.50502459575 49367.1607714895 53601.94056938357 58162.123133905174 0.8725847014055857 0.9503524855325872 1.1536797879314418 1.068735547873162 1.017081097037849 1.0962042423556457 0.8930125350654196 0.8487853969469571 0.9215953215115135 1.0 15.827792313505192 -6.777792325514288 24.989563838015716 0.9032470475343 1.0302619316873154 0.3049635894583046 0.08077781977480618 288.4994491558197 440862.9870511973 0.03550771121078137 0.02401737232683187 1.6680446611029365e-07 6.777792325514288 0.12701488415301543 EDSGLFS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 8 EDSGLFSPIR 10 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 EDSGLFS(1)PIR;EDSGLFS(1)PIR;EDSGLFS(1)PIR;EDSGLFS(1)PIR;EDSGLFS(1)PIR;EDSGLFS(1)PIR;EDSGLFS(1)PIR;EDSGLFS(1)PIR 158.3 8.510399999999999e-05 4284884000.0 2649201.0 2439141.0 2324020.0 2322855.0 2516450.0 3056188.0 3080788.0 3383225.0 4100979.0 3306804.0 True False 2502244.5394787355 2321961.0051347157 2473830.047763474 2543618.440808177 2714480.2983580907 3037113.197056622 3392224.1166334003 3371489.38212565 3356344.5908677117 3277508.289214583 0.7634594083905031 0.7084531297070027 0.7547898676272451 0.77608299243012 0.8282146248998762 0.9266530940748378 1.0350009267089626 1.028674555368886 1.0240537306686783 1.0 21.64416799852594 -6.2580611969864055 1.3773089056682752 1.029199707982536 0.7414963819493303 0.9750393830621307 0.01969610931261208 0.057395026182678534 0.2197580359873935 0.009203433660044998 0.008334448578397772 5.519996508291678e-07 6.2580611969864055 -0.2877033260332056 EDSGT(ph)FSLGK ddPTM_KYSE-520_SHP099_60min_R1 1 EDSGTFSLGK 10 0 G5E9Q4;O75569 G5E9Q4 PRKRA Interferon-inducible double-stranded RNA-dependent protein kinase activator A 1 EDS(0.286)GT(0.701)FS(0.013)LGK 116.74 0.0027214 1888600000.0 1547600.0 1428400.0 1440900.0 1465300.0 1332200.0 1500000.0 1420500.0 1697900.0 1839300.0 1557800.0 True False 1461751.5429358846 1359777.5199278884 1533782.7195215125 1604561.6714414917 1437036.5608188694 1490637.9436032532 1564098.002744023 1692010.3811928383 1505329.484979803 1543999.1039500611 0.9467308233510239 0.8806854333329126 0.9933831668668642 1.0392244835741753 0.9307237012913115 0.9654396429309496 1.0130174290532568 1.0958622818265342 0.9749548954585994 1.0 20.558240484671632 -4.484001097405271 0.4401278102115826 1.021703353100021 0.8544058902754309 0.27608292971298165 0.04818790689438473 5.52592805993546 0.9654834967742423 0.03862722595018555 0.47594493974849805 3.280944640603356e-05 4.484001097405271 -0.16729746282459013 EDSQRPGAHLTVK ddPTM_KYSE-520_SHP099_60min_R1 2 EDSQRPGAHLTVK 13 1 F8W6I7;P09651-3;P09651-2;P09651;F8W646;F8VZ49;Q32P51;F8VYN5 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 0 ; 66.708 0.027512 913640000.0 404100.0 826210.0 1070510.0 2254220.0 523610.0 698310.0 490970.0 472000.0 498080.0 659490.0 False True 381683.76744662144 786517.6314335067 1139516.7874765594 2468460.3910440444 564815.1280666325 693951.588265057 540602.0390054428 470362.74216562795 407641.2275750235 653647.4316754554 0.5839291167537739 1.2032750276666322 1.743320224720694 3.7764401287660343 0.864097525203879 1.0616603915757648 0.8270544835152949 0.7195970172482361 0.6236408311589952 1.0 19.318153150331856 -5.934488981479453 24.99999999997073 0.8425730934690644 1.8442518759133657 0.2804821961903111 0.7667386918969182 81.80813106768336 31218.20015641351 0.25266974208981546 0.28650054800835856 1.1628160525295507e-06 5.934488981479453 1.0016787824443014 EDSSVASSDRS(ph)SVER ddPTM_KYSE-520_SHP099_60min_R1 2 EDSSVASSDRSSVER 15 1 O14867 O14867 BACH1 Transcription regulator protein BACH1 1 EDSSVASSDRS(0.561)S(0.437)VER;EDSSVASSDRS(0.587)S(0.413)VER 83.25299999999999 0.0032883 78102000.0 47590.0 36765.0 29511.0 31811.0 35375.0 33598.0 34561.0 34004.0 47564.0 37160.0 True False 44950.08783168703 34998.75421460995 31413.3262792695 34834.307875674094 38158.81124378285 33388.30241945471 38054.76316285544 33886.048060593246 38927.57659086576 36830.79131004252 1.2204486038134794 0.9502580034186495 0.852909350082417 0.9457930887891607 1.036057328297973 0.9065323125531338 1.0332322985544755 0.9200467015584772 1.0569302262113363 1.0 15.168624773442279 -10.026742954144408 14.490400038614476 0.9999999999406642 0.982691534083153 0.0 0.09819548411600292 0.0 0.0 0.09293586522191832 0.022540257991952355 9.402796691881925e-11 10.026742954144408 -0.017308465857511224 EDTDHEEKAS(ph)NEDVTK ddPTM_KYSE-520_SHP099_60min_R1 1 EDTDHEEKASNEDVTK 16 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 EDTDHEEKAS(1)NEDVTK 110.77 0.00023313 0.0 69171.0 52836.0 58415.0 59589.0 62084.0 51778.0 57552.0 71495.0 76708.0 54714.0 True False 65333.94674103016 50297.67925154715 62180.52436730467 65252.32064391385 66969.65759036074 51454.83429592613 63369.91781339239 71247.00053205839 62779.76085131882 54229.276526847905 1.2047726048619611 0.9275004660378552 1.1466227903025823 1.2032674013566942 1.2349354791263962 0.9488386641199573 1.1685554717297237 1.3138106405824044 1.1576728452248064 1.0 15.726784303026468 -4.963871389937038 24.999276915019163 1.1575875001168465 1.058867695430365 0.06346384595039245 0.11813163201182429 391.6613111233367 271007.1974110955 0.03068422851495749 0.06387405552426655 1.086747400578404e-05 4.963871389937038 -0.09871980468648145 EDTEEHHLR ddPTM_KYSE-520_SHP099_60min_R1 10 EDTEEHHLR 9 0 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8VZ49;A0A2R8Y4L2;Q32P51;F8VYN5;P22626;P22626-2;A0A087WUI2 F8W6I7;P22626 HNRNPA1;HNRNPA1L2;HNRNPA2B1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;;;;;;; 185.55 2.6615e-06 16424881000.0 3962512.0 4094006.0 2771316.0 2520091.0 4007579.0 3974787.0 3102644.0 3603468.0 3243629.0 3051705.0 False True 3742703.56028816 3897323.806531707 2949959.4636223814 2759599.6909470106 4322952.667294643 3949978.8799606296 3416289.5344074033 3590968.410563755 2654667.7388330083 3024669.2678905646 1.2373926630657242 1.2885123831240366 0.9752998435031257 0.9123641120840904 1.4292315239839477 1.3059209222948813 1.1294754010543304 1.1872267982106133 0.8776720704688485 1.0 21.528345969013916 -7.75338204397887 24.974045465387444 0.9388360223832316 1.1812358658098112 0.305970908339086 0.14717636898122843 207.36196788204302 642741.57580856 0.11074885713378249 0.04022394200477454 1.764484940172745e-08 7.75338204397887 0.2423998434265796 EDVETGLDPLSLLATECTGGKT(ph)PDSEDKLFSPVIAR ddPTM_KYSE-520_SHP099_60min_R1 2 EDVETGLDPLSLLATECTGGKTPDSEDKLFSPVIAR 36 2 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7 Q5VZ89-5 DENND4C DENN domain-containing protein 4C 1 EDVETGLDPLSLLAT(0.021)ECT(0.073)GGKT(0.891)PDS(0.015)EDKLFSPVIAR;EDVETGLDPLSLLAT(0.001)ECT(0.004)GGKT(0.973)PDS(0.023)EDKLFSPVIAR 196.62 9.9699e-16 233990000.0 99695.0 132602.0 83213.0 92556.0 88455.0 120418.0 83228.0 95707.0 128985.0 101497.0 True False 94164.71961294452 126231.6008803402 88577.04312550744 101352.4944120239 95415.90525989569 119666.4265952109 91641.49846700412 95375.01475518174 105564.57544724618 100597.81554347104 0.9360513357494666 1.2548145324864644 0.8805066257848403 1.0075019409166668 0.9484888388919728 1.18955293361713 0.9109690699735259 0.9480823638160176 1.0493724428999045 1.0 16.61823945215661 -4.778583817565759 24.99999950362542 0.9931435253189438 1.0954331407371443 0.12865644504274965 0.10782432559117146 419.074298180679 611094.4878358861 0.026918041007260717 0.05625399716594877 1.6650074552012524e-05 4.778583817565759 0.10228961541820047 EDVEVAES(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 7 EDVEVAESPLR 11 0 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 EDVEVAES(1)PLR;EDVEVAES(1)PLR;EDVEVAES(1)PLR;EDVEVAES(1)PLR;EDVEVAES(1)PLR;EDVEVAES(1)PLR;EDVEVAES(1)PLR 208.27 1.5267999999999997e-09 4279460000.0 4508520.0 4195730.0 3857640.0 3349600.0 3592880.0 4005560.0 3603100.0 4166240.0 4903750.0 4103220.0 True False 4258423.4080882035 3994160.832880871 4106309.6468422357 3667944.9769060407 3875619.215309193 3980559.8142529586 3967336.510867291 4151788.28584773 4013352.613477797 4066868.6630568583 1.047101286247922 0.9821219133933534 1.0096981208524525 0.9019088839099695 0.952973783125833 0.9787775667338552 0.9755260962583547 1.020880837279619 0.9868409693026978 1.0 21.955486969955526 -7.2314104251038716 22.63225020605439 1.0028956722929032 0.9757616505094804 0.08485290010960111 0.03585213347658195 516.1016635251514 388976.15653454943 0.01773409312433662 0.010235534854481192 5.8693441460076176e-08 7.2314104251038716 -0.027134021783422835 EDVSNFDDEFTSEAPILT(ph)PPREPR ddPTM_KYSE-520_SHP099_60min_R1 5 EDVSNFDDEFTSEAPILTPPREPR 24 1 Q16513-3;Q16513-2;Q16513;Q16513-4;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 EDVSNFDDEFTSEAPILT(1)PPREPR;EDVSNFDDEFTSEAPILT(1)PPREPR;EDVSNFDDEFTSEAPILT(1)PPREPR;EDVSNFDDEFTSEAPILT(1)PPREPR;EDVSNFDDEFTSEAPILT(1)PPREPR 187.43 1.3094e-14 1216770000.0 721750.0 730400.0 609895.0 555597.0 661115.0 681417.0 558494.0 718444.0 806860.0 762910.0 True False 681713.0887270448 695310.4876472488 649209.8075665034 608400.7718336715 713140.9892702049 677164.0237441984 614952.0238961767 715951.8854500895 660354.5632853821 756151.2109349984 0.901556565497119 0.9195389461685598 0.8585714050021034 0.8046019936691895 0.943119549313939 0.8955404870764797 0.8132659380863444 0.9468369224256066 0.8733101973993251 1.0 19.52831523990466 -9.10619665107325 0.7262182894891999 1.004900689252778 0.880725912434772 0.36246633964795083 0.04608883495946171 7.218052726806534 3.745369698815352 0.15038511887108247 0.016599346559707434 7.830749815591317e-10 9.10619665107325 -0.12417477681800604 EDVSTLIGDDLASCKDET(ph)DES(ph)SKEETEPQVLK ddPTM_KYSE-520_SHP099_60min_R1 1 EDVSTLIGDDLASCKDETDESSKEETEPQVLK 32 2 H7C0R6;H7C3J3;Q9BV44 H7C0R6 THUMPD3 THUMP domain-containing protein 3 2 EDVSTLIGDDLAS(0.023)CKDET(0.977)DES(0.964)S(0.036)KEETEPQVLK 113.47 0.0010769 209470000.0 183490.0 139470.0 133370.0 129200.0 139460.0 140490.0 139240.0 139110.0 176450.0 145750.0 True False 173311.4439217534 132769.6518512619 141967.243599545 141479.12915460372 150434.7085811436 139613.14979788044 153315.73805144476 138627.45987851796 144411.12794252502 144458.76839178402 1.1997294857984568 0.9190833711885161 0.9827526925504322 0.979373773773986 1.0413677913489636 0.9664567360787553 1.0613114022655925 0.9596334055856611 0.9996702142085984 1.0 17.140298250034846 -4.248837523943615 24.884590222592124 0.9912451246490948 1.199729624984726 0.7305210969430131 0.0382143082368316 976.321364585584 1927884.7671984988 0.009226292827159789 0.15931904604980004 5.6384856054563385e-05 4.248837523943615 0.20848450033563126 EDVSTLIGDDLASCKDETDES(ph)SKEETEPQVLK ddPTM_KYSE-520_SHP099_60min_R1 3 EDVSTLIGDDLASCKDETDESSKEETEPQVLK 32 2 H7C0R6;H7C3J3;Q9BV44 H7C0R6 THUMPD3 THUMP domain-containing protein 3 1 EDVSTLIGDDLASCKDETDES(0.949)S(0.022)KEET(0.029)EPQVLK;EDVSTLIGDDLASCKDETDES(0.93)S(0.021)KEET(0.049)EPQVLK;EDVSTLIGDDLASCKDETDES(0.97)S(0.028)KEET(0.002)EPQVLK 239.84 2.9048999999999997e-31 476300000.0 339149.0 275195.0 256825.0 225686.0 271689.0 261776.0 272093.0 344160.0 302155.0 283196.0 True False 320335.7288932302 261974.2191238838 273380.3504345293 247135.12958502967 293069.3786010494 260142.15888312302 299598.815811777 342966.1892875475 247291.26870769978 280687.10376315395 1.1412555995573352 0.9333318688732481 0.9739683326000251 0.8804648531111864 1.0441141565532834 0.9268048135999617 1.0673764907438745 1.2218808227717692 0.881021127769255 1.0 18.098603254837478 -6.783231567854534 24.85688145216907 1.0610597255202407 0.9787135473250204 0.06072909056660336 0.10352391778327111 481.9814509319263 549758.178663833 0.04159726514868159 0.028072990773560867 1.6472838178593005e-07 6.783231567854534 -0.08234617819522039 EDVT(ph)PPLS(ph)PDDLK ddPTM_KYSE-520_SHP099_60min_R1 7 EDVTPPLSPDDLK 13 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 EDVT(1)PPLS(1)PDDLK;EDVT(1)PPLS(1)PDDLK;EDVT(1)PPLS(1)PDDLK;EDVT(1)PPLS(1)PDDLK;EDVT(1)PPLS(1)PDDLK;EDVT(1)PPLS(1)PDDLK;EDVT(1)PPLS(1)PDDLK 205.27 8.0178e-09 2260080000.0 5513390.0 4949450.0 4421380.0 4980270.0 5427370.0 5399630.0 5491090.0 6199430.0 6198550.0 5647970.0 True False 5207551.266029521 4711670.992724095 4706389.229258129 5453593.363427221 5854473.141488898 5365928.906278949 6046182.9650740335 6177925.6242878465 5073049.572729606 5597933.379854165 0.930263172614817 0.8416804332971253 0.8407369130535701 0.9742154815656802 1.04582758390051 0.9585553350080669 1.0800741192871335 1.1036082791769113 0.9062361461796758 1.0 22.416462887044947 -5.42058229183972 3.978519901914077 1.0207590178731631 0.8687989533379911 0.5503920414039918 0.05828212700323865 0.1666860609060519 4.64714822995215 0.016832945385438038 0.025399086958020286 3.7967998888573124e-06 5.42058229183972 -0.15196006453517208 EDYAGLKEEFR ddPTM_KYSE-520_SHP099_60min_R1 2 EDYAGLKEEFR 11 1 Q5TA02;P78417-3;P78417 Q5TA02 GSTO1 Glutathione S-transferase omega-1 0 ; 142.91 9.3099e-05 1209730000.0 1759530.0 1446030.0 1007900.0 1015150.0 1651670.0 1586020.0 1390260.0 1472080.0 1148380.0 1538980.0 False True 1661925.3633639044 1376560.5482647184 1072870.8466970182 1111629.5507840237 1781647.0322832172 1576121.060875752 1530801.048430062 1466973.6980660567 939863.1403039775 1525345.8345083217 1.0895400411930896 0.9024579981289538 0.7033623604727293 0.7287721417893046 1.1680282542991383 1.0332876815334124 1.0035763784174876 0.9617318675400057 0.6161639669124163 1.0 20.54070494456717 -4.26093438977923 20.938891927841958 0.9047156276747963 1.0895403929982188 0.1073840078131224 0.1620907562509656 11.32038295667843 467836.47790800454 0.04261658633677837 0.24358229644395538 5.483598010875374e-05 4.26093438977923 0.1848247653234225 EEAKPES(ph)EEEAIFGSWFWDR ddPTM_KYSE-520_SHP099_60min_R1 4 EEAKPESEEEAIFGSWFWDR 20 1 Q96D09 Q96D09 GPRASP2 G-protein coupled receptor-associated sorting protein 2 1 EEAKPES(1)EEEAIFGSWFWDR;EEAKPES(1)EEEAIFGSWFWDR;EEAKPES(1)EEEAIFGSWFWDR;EEAKPES(1)EEEAIFGSWFWDR 224.21 2.905e-19 100250000.0 143181.0 136969.0 112799.0 139394.0 132310.0 140386.0 134106.0 139771.0 157848.0 134262.0 True False 135238.4645057529 130388.80364533945 120070.20402478112 152641.96384966583 142722.0442590787 139509.79890045748 147662.7432284334 139286.16702379653 129186.78222426563 133072.54313425536 1.0162762454258678 0.9798325077006432 0.9022913457334596 1.1470582905721363 1.0725130887074734 1.048374034301784 1.1096409503458435 1.046693508241383 0.9707996794945939 1.0 17.02185340503802 -5.253529672920064 24.999490881067608 1.0609358438481957 0.9675032856923037 0.3700406608765372 0.05376342734209245 640.304126240867 2023747.1635320887 0.014798174995978712 0.025046781214364336 5.577894901939283e-06 5.253529672920064 -0.09343255815589202 EEAPAS(ph)PLRPLYPQIS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 15 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037 FOXK1 Forkhead box protein K1 2 EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(1)PLRPLY(0.007)PQIS(0.994)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(0.777)PLRPLY(0.223)PQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK;EEAPAS(1)PLRPLYPQIS(1)PLK 169.13 5.4511e-09 93716050000.0 46960127.0 43524873.0 40222167.0 43170612.0 44613526.0 41220371.0 43332409.0 46097581.0 49309543.0 43509386.0 True False 44355155.14261765 41433872.76891372 42814952.242562585 47273533.98476216 48124356.67996036 40963099.374668695 47712871.78527774 45937679.2507673 40356172.983623885 43123926.68983009 1.0285509355779032 0.9608093684725856 0.992835196815684 1.0962251727394452 1.115954885697121 0.9498926122682845 1.106412969497276 1.0652480601123175 0.935818606544962 1.0 25.361985214241205 -5.053767800374396 23.946352210213337 1.0436625722615804 0.9902156366535302 0.0957558863288075 0.06087398582356497 387.6474775927687 172644.3485169017 0.016393159095295654 0.028394193724434344 8.83552173626599e-06 5.053767800374396 -0.05344693560805025 EEAPAS(ph)PLRPLYPQISPLK ddPTM_KYSE-520_SHP099_60min_R1 7 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037 FOXK1 Forkhead box protein K1 1 EEAPAS(1)PLRPLYPQISPLK;EEAPAS(1)PLRPLYPQISPLK;EEAPAS(1)PLRPLYPQISPLK;EEAPAS(1)PLRPLYPQISPLK;EEAPAS(1)PLRPLYPQISPLK;EEAPAS(1)PLRPLYPQISPLK;EEAPAS(1)PLRPLYPQISPLK 262.55 2.7025999999999996e-35 16028630000.0 9359240.0 10578620.0 8194960.0 8402520.0 8222120.0 9273280.0 7984530.0 11000380.0 11832750.0 10925120.0 True False 8840064.300017616 10070407.21636766 8723220.233999606 9201092.974490233 8869154.066536589 9215402.019771436 8791684.21390335 10962222.249287985 9684220.879353423 10828331.936414734 0.8163828327324593 0.9300054039257664 0.8055922449758101 0.8497239490366713 0.8190692821957553 0.8510453940538011 0.8119149159380389 1.0123648142354216 0.8943409692481106 1.0 23.368307682558562 -7.256669913698792 24.995684487977744 0.9650146707209954 0.8425630114664907 0.6358725339945728 0.04446761646187873 245.6697063549877 1287506.1707504469 0.020465964704500378 0.011340493097015548 5.537708438301704e-08 7.256669913698792 -0.12245165925450474 EEAPASPLRPLYPQIS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 7 EEAPASPLRPLYPQISPLK 19 1 P85037;P85037-2;U3KQ26 P85037 FOXK1 Forkhead box protein K1 1 EEAPASPLRPLYPQIS(1)PLK;EEAPASPLRPLYPQIS(1)PLK;EEAPASPLRPLYPQIS(1)PLK;EEAPASPLRPLYPQIS(1)PLK;EEAPASPLRPLYPQIS(1)PLK;EEAPASPLRPLYPQIS(1)PLK;EEAPASPLRPLYPQIS(1)PLK 178.11 1.9593e-09 4233600000.0 3451830.0 3434980.0 2698000.0 2557460.0 2630600.0 3297570.0 2787380.0 3457540.0 3891050.0 3354570.0 True False 3260350.108847492 3269958.4047899083 2871917.396952632 2800520.229471615 2837613.2539334316 3276988.642458518 3069155.572607273 3445546.6007359046 3184533.4053882784 3324851.1196159646 0.9806003311282332 0.9834901735893676 0.8637732318325133 0.842299437995614 0.853455734361179 0.9856046254597485 0.9230956401325344 1.0363010182344288 0.9577972940202226 1.0 21.66485831029873 -6.7252632188675845 1.7780676105120625 0.991958475173849 0.9063658438104204 0.3001999527624746 0.054131342512587444 0.4806326519972406 3.1104870773857796 0.030849821756877203 0.019753299421282365 1.8825077861128253e-07 6.7252632188675845 -0.08559263136342865 EEAQS(ph)LEDLAGFK ddPTM_KYSE-520_SHP099_60min_R1 1 EEAQSLEDLAGFK 13 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 EEAQS(1)LEDLAGFK 189.81 2.5029e-08 77365000.0 162400.0 158990.0 145370.0 119250.0 118090.0 139730.0 133480.0 151550.0 165570.0 142670.0 True False 153391.34826362625 151351.8817511445 154740.78280022368 130583.48414618008 127383.01115981108 138857.89323978816 146973.4610392623 151024.30842203606 135506.66168004458 141406.05479558025 1.084757993463379 1.0703352269458488 1.094300969105746 0.9234645880967013 0.9008313777225367 0.9819798271051705 1.0393717670133038 1.068018683078035 0.958280477281797 1.0 17.10948436994862 -5.242880316875507 24.788765015501838 0.9835850746778991 1.0818517930707534 0.496099629164353 0.04681052098092729 740.9085307918917 989606.8408318078 0.014513655584557139 0.025079456458614945 5.716361467874383e-06 5.242880316875507 0.09826671839285428 EEAS(ph)DDDMEGDEAVVR ddPTM_KYSE-520_SHP099_60min_R1 13 EEASDDDMEGDEAVVR 16 0 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 1 EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR;EEAS(1)DDDMEGDEAVVR 438.69 6.575699999999998e-118 13373300000.0 9483630.0 8810540.0 7721020.0 6914700.0 7657850.0 7984900.0 7504870.0 7404170.0 9213520.0 7825750.0 True False 8957554.138752298 8387268.433509847 8218729.303268792 7571871.009019638 8260479.227793715 7935063.277251743 8263535.500072878 7378486.662416268 7540577.021938304 7756419.943341373 1.1548567772483824 1.0813324310412096 1.0596034463456683 0.9762069439677304 1.0649860745207667 1.0230316737896237 1.0653801058266381 0.9512747783531824 0.9721723523249457 1.0 22.88695948439536 -1.0000000000007205 0.4386945695772582 0.9977296947589994 4.277597461114448 0.6403603510290439 0.03533739582851018 56.39727431770512 0.6978322744119803 0.023823133020050347 164.42961036096025 0.0999999999998341 1.0000000000007205 3.2798677663554487 EEASDYLELDTIK ddPTM_KYSE-520_SHP099_60min_R1 1 EEASDYLELDTIK 13 0 P14625;Q96GW1;A0A1W2PRR1 P14625 HSP90B1 Endoplasmin 0 199.82 6.223e-08 0.0 106030.0 124730.0 152960.0 68969.0 95467.0 107390.0 81604.0 89168.0 130730.0 96275.0 False True 100148.30453443532 118737.78357645309 162820.04634465306 75523.79302371405 102979.70976707326 106719.73917570221 89853.32869829147 88858.69701996767 106992.72743511654 95422.07840081658 1.049529691794874 1.2443428771033453 1.706314189266912 0.7914708450017135 1.0792021248427555 1.1183967166113304 0.9416408676497927 0.9312173713794025 1.1212575666786246 1.0 16.542035489743974 -5.282081171814747 24.999632147339554 1.0008339103866941 1.324490416980387 0.42923119041101776 0.17733157864009627 767.8395285118936 929942.0778360656 0.05019690828817883 0.0745447078374312 5.222985596578641e-06 5.282081171814747 0.32365650659369294 EEATYGVWAERDS(ph)DDERPSFGGK ddPTM_KYSE-520_SHP099_60min_R1 10 EEATYGVWAERDSDDERPSFGGK 23 2 Q9UBB9;F6XM96;F6UKU9;F6SQZ1 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 EEATYGVWAERDS(0.999)DDERPS(0.001)FGGK;EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK;EEATYGVWAERDS(1)DDERPSFGGK 223.75 2.2677e-21 21378580000.0 14903210.0 14304140.0 13437890.0 13598080.0 13571800.0 13588470.0 12982100.0 13932200.0 16198250.0 13226870.0 True False 14076499.232487429 13616947.643448137 14304117.890784217 14890437.434788175 14639823.447021123 13503659.318342984 14294457.361086333 13883872.449999914 13257056.124652898 13109690.22214915 1.0737476625271305 1.0386933186599605 1.0911102892894486 1.13583442342752 1.1167177255101555 1.0300517471822646 1.0903733893677738 1.0590541969132699 1.0112409904434485 1.0 23.644130259744554 -7.699462025835685 2.200378660941913 0.9987081054085901 1.0827006514022615 0.50832416858797 0.029878777758819666 0.2735265888373936 2.458483332421388 0.02991227799933259 0.008823874882906058 1.997735440285135e-08 7.699462025835685 0.08399254599367134 EECPRPMS(ph)IS(ph)PPDFSPK ddPTM_KYSE-520_SHP099_60min_R1 3 EECPRPMSISPPDFSPK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 EECPRPMS(1)IS(0.997)PPDFS(0.003)PK;EECPRPMS(1)IS(1)PPDFSPK;EECPRPMS(1)IS(0.999)PPDFS(0.001)PK 95.195 0.001045 166320000.0 1113530.0 898870.0 772540.0 999620.0 965970.0 932800.0 914810.0 1085220.0 1118050.0 1024810.0 True False 1051760.2711329786 855686.9359686233 822339.164507703 1094623.5842532886 1041986.3433825285 926978.0491954084 1007287.9224852214 1081455.6251122511 915040.3037468983 1015730.9806901148 1.0354712922297442 0.8424346133335883 0.8096033104641387 1.0776707662392773 1.0258487367142972 0.912621616173994 0.9916877023883264 1.0647067438835836 0.9008687547614187 1.0 19.95408692004041 -5.261335673555926 24.999999952707977 0.9964615719801226 0.8904962294315886 0.2658089788440192 0.07628219941962593 12.26008562222713 2955115.406256425 0.021146759556088992 0.033807518042221776 5.478533561028393e-06 5.261335673555926 -0.10596534254853407 EECPRPMSIS(ph)PPDFSPK ddPTM_KYSE-520_SHP099_60min_R1 1 EECPRPMSISPPDFSPK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EECPRPMS(0.039)IS(0.961)PPDFSPK 187.62 2.0332e-12 506690000.0 650510.0 560560.0 486830.0 497810.0 591610.0 569810.0 554040.0 635810.0 739830.0 590660.0 True False 614424.9135404652 533629.856182286 518211.8407555405 545121.7127279659 638166.3411995585 566253.6044297122 610047.7701093254 633604.5235091692 605495.5215965894 585427.2119265259 1.049532548236891 0.9115221248875929 0.8851857757862112 0.9311519888767682 1.090086569600136 0.967248520215319 1.0420557119334752 1.0822942811696457 1.0342797691347871 1.0 19.15913028133658 -5.743777673610007 24.998252409326717 1.0369746528675428 0.9377774782913472 0.4241479009749727 0.052081680192809676 226.49267248300805 320574.8074540987 0.015504376644453886 0.0199701239603246 1.8039409877909699e-06 5.743777673610007 -0.09919717457619559 EECPRPMSISPPDFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 EECPRPMSISPPDFSPK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EECPRPMSISPPDFS(1)PK;EECPRPMSISPPDFS(1)PK;EECPRPMSISPPDFS(1)PK 153.82 2.0534e-06 5767200000.0 3384360.0 3127710.0 2682040.0 3020530.0 3267360.0 2954540.0 3058190.0 3511790.0 3798740.0 3166580.0 True False 3196622.8042456056 2977450.1168115735 2854928.589815728 3307600.26304454 3524482.643264632 2936099.619929033 3367341.6902581793 3499608.4201479484 3108984.5744425515 3138526.56476196 1.0185106731725408 0.948677685332065 0.9096397723280888 1.053870405361824 1.1229736535723556 0.9355025548913013 1.0729052696463552 1.1150482074741892 0.9905873059507945 1.0 21.581655989393216 -5.27932139712642 24.313291024449498 1.046628835397493 0.9579162078392439 0.2878524423798473 0.05916438225749664 658.8680030220905 895828.6516446847 0.01662502254078169 0.02472304095820968 5.2562813435188235e-06 5.27932139712642 -0.08871262755824916 EEDCHS(ph)PTSKPPKPDQPLK ddPTM_KYSE-520_SHP099_60min_R1 9 EEDCHSPTSKPPKPDQPLK 19 2 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 EEDCHS(0.997)PT(0.001)S(0.001)KPPKPDQPLK;EEDCHS(0.885)PT(0.105)S(0.01)KPPKPDQPLK;EEDCHS(0.96)PT(0.033)S(0.007)KPPKPDQPLK;EEDCHS(0.976)PT(0.02)S(0.004)KPPKPDQPLK;EEDCHS(0.465)PT(0.465)S(0.07)KPPKPDQPLK;EEDCHS(0.976)PT(0.02)S(0.004)KPPKPDQPLK;EEDCHS(0.48)PT(0.251)S(0.268)KPPKPDQPLK;EEDCHS(0.995)PT(0.004)S(0.001)KPPKPDQPLK;EEDCHS(0.795)PT(0.176)S(0.029)KPPKPDQPLK 232.82 4.6182000000000003e-26 45077600000.0 18816450.0 16617010.0 14515070.0 22451750.0 17354800.0 16386670.0 18204560.0 19018970.0 17941580.0 15982880.0 True False 17772664.00883687 15818703.896959497 15450734.637133129 24585557.569635216 18720524.024695475 16284394.714203399 20044854.584184214 18952997.632130988 14683841.34242589 15841284.117692469 1.121920664814497 0.9985745965689894 0.9753460970930286 1.5519927164349405 1.1817554615908505 1.0279718861942535 1.265355411547537 1.196430636009058 0.9269350409558099 1.0 23.917185951342315 -7.760508878005658 24.994986880029373 0.9634674561806994 1.1653012966723335 0.20744456743989592 0.15750306209691659 39.88819127022103 1071729.221377932 0.12749565548123032 0.041801458335101106 1.7357657793537833e-08 7.760508878005658 0.2018338404916341 EEDCHSPT(ph)SKPPKPDQPLK ddPTM_KYSE-520_SHP099_60min_R1 1 EEDCHSPTSKPPKPDQPLK 19 2 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 EEDCHS(0.117)PT(0.735)S(0.148)KPPKPDQPLK 153.56 1.633e-06 3043400000.0 2019400.0 1894700.0 1543100.0 2354700.0 1840100.0 2035000.0 2138100.0 2129100.0 1953900.0 1928300.0 True False 1907379.8564259051 1803675.7679973214 1642570.6950472961 2578489.980033631 1984905.4012631772 2022298.8101550776 2354240.01384512 2121714.6490356764 1599121.013810708 1911216.7621946991 0.9979924277325886 0.9437316602048396 0.8594371541410563 1.3491352896427535 1.0385558773479255 1.0581211143380829 1.2318016775562841 1.1101381543971272 0.8367031126152307 1.0 20.866059981343824 EEDEENDNDNES(ph)DHDEADS ddPTM_KYSE-520_SHP099_60min_R1 3 EEDEENDNDNESDHDEADS 19 0 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 EEDEENDNDNES(0.981)DHDEADS(0.019);EEDEENDNDNES(0.853)DHDEADS(0.147);EEDEENDNDNES(0.987)DHDEADS(0.013) 224.4 6.037e-21 1104305000.0 1213746.0 1169840.0 1030772.0 1035999.0 1096871.0 1079149.0 1074021.0 1095257.0 1259859.0 1076247.0 True False 1146417.0898373348 1113639.1304343613 1097217.2124135138 1134460.0334755434 1183188.50735772 1072413.630801004 1182593.524114845 1091457.8091019061 1031100.3640608777 1066712.2888874968 1.0747200550515494 1.0439920323743581 1.0285971426820548 1.0635107941417854 1.1091917845923567 1.005344779443249 1.1086340116585738 1.0231979330061127 0.9666152483686489 1.0 20.024739677663362 -7.525911416152136 6.916439755730218 0.9864213093325095 1.0602025410660427 0.5044400554355924 0.03133554861523777 0.10585652048650526 29.655510869053426 0.01923962104367428 0.007768661860771567 2.9791240248924033e-08 7.525911416152136 0.07378123173353324 EEDEEPES(ph)PPEK ddPTM_KYSE-520_SHP099_60min_R1 5 EEDEEPESPPEK 12 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EEDEEPES(1)PPEK;EEDEEPES(1)PPEK;EEDEEPES(1)PPEK;EEDEEPES(1)PPEK;EEDEEPES(1)PPEK 278.82 2.7923e-19 2420670000.0 4042810.0 3394930.0 2860180.0 3163190.0 3196410.0 3534860.0 3492190.0 3842850.0 3838950.0 3412540.0 True False 3818547.2701580664 3231832.466906177 3044551.7792498088 3463818.626552248 3447949.281914914 3512797.627550261 3845214.6456899964 3829520.0502779367 3141893.452054159 3382307.5505159446 1.1289769523104358 0.9555111173770068 0.9001404318733186 1.0240992502363866 1.0194073810316144 1.038580192689577 1.1368613256660942 1.1322211221430096 0.9289200952689496 1.0 21.68957641814092 -6.042615757524585 2.0953613121265096 1.0612705230685482 0.9914763118983881 0.053669222988445564 0.07860423854906247 0.6992153483820528 6.128217370065994 0.02959219125902689 0.03150399022731881 9.065343033201532e-07 6.042615757524585 -0.06979421117016005 EEDEEPES(ph)PPEKK ddPTM_KYSE-520_SHP099_60min_R1 16 EEDEEPESPPEKK 13 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK;EEDEEPES(1)PPEKK 324.81 1.8545999999999997e-57 184315620000.0 22172960.0 19108970.0 17544760.0 18383330.0 18402700.0 19608690.0 20408330.0 20418800.0 21218200.0 19320820.0 True False 20942981.70810006 18190946.39805126 18675723.302208558 20130476.156050306 19850887.79296006 19486304.89223576 22471403.162506793 20347971.948583726 17365509.74729432 19149652.566170514 1.0936481294233824 0.9499361064224794 0.9752512865534076 1.0512188712819 1.0366186918726836 1.0175800748813568 1.1734627082584481 1.0625765599805266 0.9068315828336211 1.0 24.190814881656294 -3.887576482807275 17.812202823570676 1.0259034487944474 7.908174290562109 0.08862122183245658 0.068650851688158 491.75758601301624 78043.8805985742 0.017252114400647143 229.76527852240844 0.00012954585365924532 3.887576482807275 6.882270841767662 EEDEPEERS(ph)GDETPGSEVPGDK ddPTM_KYSE-520_SHP099_60min_R1 8 EEDEPEERSGDETPGSEVPGDK 22 1 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 EEDEPEERS(1)GDETPGSEVPGDK;EEDEPEERS(1)GDETPGSEVPGDK;EEDEPEERS(0.959)GDET(0.041)PGSEVPGDK;EEDEPEERS(1)GDETPGSEVPGDK;EEDEPEERS(1)GDETPGSEVPGDK;EEDEPEERS(0.984)GDET(0.016)PGSEVPGDK;EEDEPEERS(0.998)GDET(0.002)PGSEVPGDK;EEDEPEERS(0.991)GDET(0.006)PGS(0.003)EVPGDK 232.0 2.0884e-21 12595600000.0 7899870.0 7583630.0 6978680.0 6235300.0 6937260.0 6916650.0 6253920.0 6771440.0 9264540.0 6564830.0 True False 7461648.463099592 7219301.031539302 7428536.879082794 6827901.0372886965 7483182.8943899665 6873480.621748955 6886127.265977404 6747951.455105983 7582333.076047835 6506670.713560458 1.1467690300584719 1.1095230340293172 1.1416801627291646 1.0493693838015756 1.1500786229729396 1.0563744385318337 1.0583180814154505 1.0370820581165534 1.1653168586271938 1.0 22.633488113691147 -6.978800791618448 0.012962087366527555 2.849272810932996e-07 2.1635836913647797 0.3289218821780673 0.04503426817779566 890.1996891922616 8.680762123373473 713.872652502786 733.2651586486825 1.0500239581581907e-07 6.978800791618448 2.163583406437499 EEDGADAS(ph)EEDLTR ddPTM_KYSE-520_SHP099_60min_R1 2 EEDGADASEEDLTR 14 0 Q86X53;E5RHA3 Q86X53 ERICH1 Glutamate-rich protein 1 1 EEDGADAS(1)EEDLTR;EEDGADAS(1)EEDLTR 144.29 5.7894e-05 231360000.0 835870.0 750100.0 773370.0 702820.0 764700.0 792290.0 698900.0 762130.0 912090.0 710750.0 True False 789502.6248344663 714064.0700769452 823222.6676357501 769615.8014894613 824877.5394521776 787345.0242249477 769551.6326066857 759486.3489124787 746477.4479178113 704453.3079551333 1.1207309496866609 1.0136428660541177 1.1685979160568885 1.0925007985603472 1.1709470736202634 1.1176681482416913 1.0924097082324988 1.0781216303988885 1.0596549685949586 1.0 19.42614456051188 -7.934471161155912 1.084408421592642 1.0014673626096489 1.1123068194136847 0.41689224556444426 0.04142144194212378 0.5056952531828569 1.3354880622117606 0.039343128648689815 0.012895985183618447 1.1628637671201806e-08 7.934471161155912 0.11083945680403584 EEEADMSS(ph)PTQR ddPTM_KYSE-520_SHP099_60min_R1 5 EEEADMSSPTQR 12 0 E9PDI4;O00515 E9PDI4 LAD1 Ladinin-1 1 EEEADMS(0.025)S(0.975)PTQR;EEEADMS(0.002)S(0.998)PTQR;EEEADMS(0.001)S(0.99)PT(0.01)QR;EEEADMS(0.003)S(0.994)PT(0.002)QR;EEEADMS(0.097)S(0.902)PT(0.001)QR 252.2 1.0347e-24 1726440000.0 3546668.0 3088284.0 2855274.0 3082755.0 3303245.0 3592374.0 3926326.0 4501365.0 4486708.0 4170989.0 True False 3349927.2559326254 2939918.20103121 3039329.530639927 3375739.1083359085 3563191.5886069145 3569952.6613425226 4323237.349329051 4485750.815441486 3672034.927904507 4134037.2824403387 0.8103282643728723 0.7111494164599707 0.7351964491345367 0.8165720040006984 0.8619156880229073 0.8635511528902239 1.045766415240703 1.0850774942197738 0.8882442699541622 1.0 21.9791199689606 -6.233417600592819 1.2121979460081636 1.0103350235676594 0.7545880525248644 0.7414772879959751 0.060785988102183365 0.22494005327623598 0.6795692991223409 0.03054288168090324 0.028213146263586807 5.842280431265855e-07 6.233417600592819 -0.255746971042795 EEECKEPLLFHSGDHYPLS(ph)DGDWSPLETTYPQTACPK ddPTM_KYSE-520_SHP099_60min_R1 1 EEECKEPLLFHSGDHYPLSDGDWSPLETTYPQTACPK 37 1 Q92539 Q92539 LPIN2 Phosphatidate phosphatase LPIN2 1 EEECKEPLLFHS(0.051)GDHY(0.009)PLS(0.884)DGDWS(0.051)PLET(0.002)T(0.002)YPQTACPK 71.908 0.007826600000000001 180250000.0 29125.0 36731.0 40207.0 80690.0 27142.0 31092.0 33155.0 25507.0 55612.0 31408.0 True False 27509.37819075191 34966.38762564496 42798.80755347457 88358.75333966689 29277.920983144995 30897.943295008186 36506.63096161775 25418.522170378565 45514.26266443583 31129.749555054248 0.8837005945743457 1.1232466732122421 1.3748522929098133 2.8384023194083454 0.940512577249161 0.9925535456160319 1.1727248527025336 0.8165347467837754 1.4620825196149418 1.0 14.926006349638435 EEEDGQWKEEQKLEAHSDWVR ddPTM_KYSE-520_SHP099_60min_R1 1 EEEDGQWKEEQKLEAHSDWVR 21 2 A8MXL6;P55735-2;P55735;P55735-4;P55735-3 A8MXL6 SEC13 Protein SEC13 homolog 0 168.78 5.116300000000001e-09 658210000.0 366950.0 343260.0 256250.0 225400.0 289570.0 230930.0 271000.0 260090.0 337130.0 235460.0 False True 346594.5520033102 326769.27435623575 272768.2850144963 246821.94823101905 312357.5115720765 229488.68021086612 298395.32470512466 259187.8084954626 275915.6903557011 233374.00758510816 1.485146334802997 1.4001956676219294 1.168803192082227 1.0576239864287655 1.338441734811295 0.9833514991046074 1.278614220121768 1.11061129376604 1.1822897211681922 1.0 17.832284361890594 -4.709004914626601 3.424942293793608 1.1453959027095517 1.4678914222384507 0.5699098047685323 0.10639843963289067 0.15461401661939064 3.605873782216584 0.025940630924749516 0.07745337256922577 1.954317339919145e-05 4.709004914626601 0.322495519528899 EEEDITVLVT(ph)PEKPLRR ddPTM_KYSE-520_SHP099_60min_R1 1 EEEDITVLVTPEKPLRR 17 2 Q5T2Z0;Q5T2Z1;Q6PGN9-3;Q6PGN9-2;Q6PGN9 Q5T2Z0 PSRC1 Proline/serine-rich coiled-coil protein 1 1 EEEDITVLVT(1)PEKPLRR 102.33 0.00058311 250430000.0 78932.0 73579.0 60817.0 57782.0 59579.0 62795.0 56461.0 68386.0 73144.0 70181.0 True False 74553.48461295894 70044.15439566929 64737.36113064054 63273.58390720825 64267.528341861165 62403.07311237745 62168.62888625853 68148.78492741245 59862.893410190154 69559.25093999172 1.0717982670238315 1.0069710850695603 0.9306793885185596 0.9096357860695471 0.9239249628680493 0.8971211200392619 0.8937506952150904 0.9797228119406278 0.8606029047356111 1.0 16.085954776383456 -4.559955290029463 2.120725350289766 0.919779303978138 1.0766692584215571 0.607531300084641 0.03863461143992792 0.23866291572945647 1.8100600154064015 0.009782633637777777 0.05650861081879658 2.7545122616796685e-05 4.559955290029463 0.15688995444341913 EEEDKDDEEKPK ddPTM_KYSE-520_SHP099_60min_R1 4 EEEDKDDEEKPK 12 2 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ;;; 131.26 4.1512e-05 8575000000.0 9203820.0 8716260.0 5025800.0 6363390.0 8599910.0 9371410.0 8424940.0 9219980.0 7591190.0 7748490.0 False True 8693265.757239701 8297517.786227005 5349771.10956432 6968164.6723770425 9276673.99020553 9312919.554041972 9276615.154690757 9187998.041339519 6212821.254327098 7679844.406834008 1.1319585784191002 1.0804278507053284 0.6965988926551373 0.9073314904890952 1.207924731124834 1.2126443011989607 1.207917070095306 1.1963781496879624 0.8089774903250044 1.0 22.87264565165565 -5.752701909688734 24.991582886061188 1.125923240673425 0.9447126297107353 0.16820578724629864 0.16083545222240314 308.20239417114965 881539.6028551109 0.04987135480097593 0.06338761183332414 1.767250406834586e-06 5.752701909688734 -0.18121061096268964 EEEEAT(ph)ASERNDADEKHPEHAEQNIR ddPTM_KYSE-520_SHP099_60min_R1 1 EEEEATASERNDADEKHPEHAEQNIR 26 2 A0A0A0MRK1;E9PAV9;Q5T3I0;Q5T3I0-3;F8W895 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 EEEEAT(0.579)AS(0.421)ERNDADEKHPEHAEQNIR 174.72 3.6249000000000006e-10 91969000.0 76502.0 57173.0 52484.0 78911.0 70619.0 51860.0 59644.0 67086.0 72946.0 47886.0 True False 72258.28155704388 54426.32326157744 55867.20261736911 86410.6777145428 76176.31353285376 51536.322503509764 65673.39758934487 66853.29432399018 59700.84521901634 47461.76729474428 1.5224524006514497 1.146740342043782 1.177099079990551 1.8206375918941302 1.6050037298398119 1.085849209606164 1.3837115921432885 1.4085715331420716 1.257872359625078 1.0 15.534478201528694 -6.258737539097788 24.918764309171486 1.2625185805602717 1.4422375715904232 0.20619461199222466 0.21677171321393388 521.8416319990494 4812894.881266755 0.07865104823591869 0.07527694039794668 5.511406713406593e-07 6.258737539097788 0.17971899103015154 EEEEATAS(ph)ERNDADEKHPEHAEQNIR ddPTM_KYSE-520_SHP099_60min_R1 1 EEEEATASERNDADEKHPEHAEQNIR 26 2 A0A0A0MRK1;E9PAV9;Q5T3I0;Q5T3I0-3;F8W895 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 EEEEAT(0.047)AS(0.953)ERNDADEKHPEHAEQNIR 170.29 1.7309000000000002e-10 113870000.0 32569.0 34496.0 33730.0 36832.0 35828.0 31599.0 39549.0 40620.0 42093.0 34234.0 True False 30762.332645308135 32838.76038044837 35904.28976990817 40332.5022060554 38647.459766565444 31401.778919946097 43546.998881044216 40479.098700779294 34449.97227817913 33930.71339364897 0.9066220414648316 0.9678181534077328 1.0581648948362108 1.1886723906490186 1.1390111171019275 0.9254676892771659 1.2834094696398335 1.1929928566829375 1.0153035062512819 1.0 15.050304142597453 -4.76368516697198 2.5472089289901945 1.1160314515013732 0.9182965541283912 0.30833166316669747 0.10032545624257216 0.3283151915238407 4.189145516499699 0.02749584426070443 0.08868221119175967 1.723117261441931e-05 4.76368516697198 -0.197734897372982 EEEEDDDEDEDEEDDVS(ph)EGSEVPESDRPAGAQHHQLNGER ddPTM_KYSE-520_SHP099_60min_R1 4 EEEEDDDEDEDEEDDVSEGSEVPESDRPAGAQHHQLNGER 40 1 Q6SPF0;E9PIW9 Q6SPF0 SAMD1 Atherin 1 EEEEDDDEDEDEEDDVS(0.955)EGS(0.045)EVPESDRPAGAQHHQLNGER;EEEEDDDEDEDEEDDVS(0.998)EGS(0.002)EVPESDRPAGAQHHQLNGER;EEEEDDDEDEDEEDDVS(0.836)EGS(0.164)EVPESDRPAGAQHHQLNGER;EEEEDDDEDEDEEDDVS(0.996)EGS(0.004)EVPESDRPAGAQHHQLNGER 284.79 6.155800000000001e-54 1161740000.0 126178.0 114819.0 97972.0 112143.0 116817.0 120787.0 106301.0 127068.0 135574.0 88186.0 True False 119178.65481039287 109302.92289316727 104287.43188074231 122801.03700297771 126009.83330219025 120033.12352933738 117046.94247778405 126627.23076589424 110957.1791424193 87404.74064766981 1.3635262106755093 1.2505376949034086 1.193155326678755 1.4049699832414246 1.441681908423461 1.3733022103823087 1.3391372322652673 1.4487455694918316 1.2694640853599672 1.0 16.415423910115205 -8.02326923144789 22.786375427446536 0.9999999964155486 1.3489425949746097 0.6638363771748258 0.07520352212767707 403.4624117470388 395090.7707968042 0.07932558260056885 0.02048177734628904 9.478306940439597e-09 8.02326923144789 0.34894259855906107 EEEEDGQEGS(ph)IHNLPLVTSQRPFYDGPMPTPR ddPTM_KYSE-520_SHP099_60min_R1 6 EEEEDGQEGSIHNLPLVTSQRPFYDGPMPTPR 32 1 O75717;O75717-2;H3BSQ1 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 EEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;EEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;EEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;EEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;EEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;EEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR 237.34 3.4001999999999993e-31 13267600000.0 3169500.0 3020660.0 2733200.0 3301620.0 2989010.0 2951680.0 3100710.0 3796900.0 3515370.0 2984590.0 True False 2993681.5167583902 2875542.959496906 2909386.445274622 3615404.9721317478 3224228.081859486 2933257.470249895 3414160.026813386 3783729.440103122 2877067.4232661594 2958148.8545758817 1.0120117897811478 0.9720751391698241 0.9835159041351721 1.2221849372249047 1.0899478830728933 0.9915854862112558 1.154154234507879 1.2790868972838103 0.9725904830028078 1.0 21.49626322025851 -5.213067842983767 24.790539334372674 1.1101427032569626 0.987488244902103 0.22443077274979273 0.09455318284499999 500.3745714237268 256442.30224863824 0.02551996364099559 0.044201756582256474 6.122547413429974e-06 5.213067842983767 -0.12265445835485966 EEEEGIS(ph)QES(ph)S(ph)EEEQ ddPTM_KYSE-520_SHP099_60min_R1 2 EEEEGISQESSEEEQ 15 0 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 3 EEEEGIS(1)QES(1)S(1)EEEQ;EEEEGIS(1)QES(1)S(1)EEEQ 195.96 1.3780999999999998e-09 0.0 520430.0 504720.0 431340.0 431740.0 494010.0 425840.0 438550.0 480200.0 546770.0 455480.0 True False 491560.71044851624 480472.4935998352 459144.8665684012 472772.4397926359 532885.7764675955 423182.17460267263 482882.91383554414 478534.2982795228 447490.3509500389 451444.8015580778 1.0888611603278757 1.0642995377099784 1.017056492806536 1.0472430697195974 1.1804007369858713 0.9373951657924469 1.0696388842422453 1.0600062214205384 0.9912404559884378 1.0 18.784190073689548 -7.760646626934094 24.950470834009714 0.9956202015532891 1.0570245941084233 0.16105718147720294 0.057007778476998755 36.94119379555895 1162984.4518896292 0.0431772395430928 0.0141244438684687 1.735215318845057e-08 7.760646626934094 0.06140439255513419 EEEEGISQES(ph)S(ph)EEEQ ddPTM_KYSE-520_SHP099_60min_R1 2 EEEEGISQESSEEEQ 15 0 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 2 EEEEGISQES(1)S(1)EEEQ;EEEEGISQES(1)S(1)EEEQ 263.15 2.8171e-27 1055470000.0 1017920.0 930510.0 777590.0 816540.0 902260.0 857690.0 875130.0 988830.0 1013190.0 927210.0 True False 961453.9484267888 885806.9028760142 827714.6955879898 894143.7160982965 973262.7288428404 852336.8385660492 963596.6808457403 985399.9795246571 829220.2364414106 918995.6407584647 1.0462007715654478 0.9638858592897577 0.9006731467244621 0.9729575162732464 1.059050430358503 0.927465594790634 1.0485323739408225 1.072257512246073 0.9023113926384235 1.0 19.809698492565854 -5.545335919116743 24.94873206374301 1.0049597933157777 0.9641496272353661 0.05376348453154223 0.06056543380952796 581.8261970177941 646374.4734122629 0.017737522391920727 0.022900854287866503 2.8488139078191286e-06 5.545335919116743 -0.04081016608041155 EEEEIS(ph)ELQEDDRDQFSDQLASVGMLGR ddPTM_KYSE-520_SHP099_60min_R1 3 EEEEISELQEDDRDQFSDQLASVGMLGR 28 1 F2Z2X4;Q9C0E2 F2Z2X4 XPO4 Exportin-4 1 EEEEIS(1)ELQEDDRDQFSDQLASVGMLGR;EEEEIS(1)ELQEDDRDQFSDQLASVGMLGR;EEEEIS(1)ELQEDDRDQFSDQLASVGMLGR 209.25 2.3599e-22 216873000.0 172038.0 145949.0 139108.0 113678.0 128365.0 130627.0 115540.0 141232.0 154382.0 132654.0 True False 162494.70919074968 138937.3909660849 148075.12426066966 124481.922941463 138466.59520305833 129811.70843937475 127219.91076173472 140742.09915579655 126350.12045351593 131478.78876325028 1.235900564032034 1.0567285588268165 1.1262282353947135 0.9467833109233588 1.0531477853236904 0.9873205378635075 0.9676078701243256 1.070454789549563 0.9609924280716536 1.0 17.004470545328022 -1.0000000000002929 0.6678734256711354 1.0004768885737707 24.11560164514509 0.6730133462926771 0.04843252728711866 136.15616726076038 0.8202512439773612 0.01851779188405209 4671.039028069435 0.09999999999993256 1.0000000000002929 23.11512475657132 EEEELNLPIS(ph)PEEER ddPTM_KYSE-520_SHP099_60min_R1 1 EEEELNLPISPEEER 15 0 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 EEEELNLPIS(1)PEEER 129.25 5.3874e-05 634190000.0 597600.0 589480.0 488610.0 462990.0 492820.0 703160.0 558030.0 593240.0 720160.0 687930.0 True False 564449.9367139351 561160.495972481 520106.58240364166 506992.43039698125 531602.1302377688 698771.3176160413 614441.118247973 591182.1889032569 589397.0977562412 681835.4754014405 0.8278389099388046 0.823014519216809 0.7628036398332331 0.7435700380630417 0.7796633490282686 1.0248386052436322 0.9011574498763237 0.8670452187240475 0.8644271514462123 1.0 19.37906413823599 -6.229440733400149 24.60854606025961 0.9212880013920312 0.7855588338132374 0.6391995114791701 0.053856414834220975 391.6273428030663 301180.8952736124 0.01853618577000688 0.018534585349095994 5.896024324907378e-07 6.229440733400149 -0.13572916757879372 EEEEQQEGGFAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 EEEEQQEGGFASPR 14 0 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2;A0A087WWG9 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 EEEEQQEGGFAS(1)PR 233.78 3.3801e-17 0.0 79024.0 83726.0 78126.0 58943.0 73800.0 64730.0 70022.0 75059.0 74356.0 78806.0 True False 74640.38118956155 79703.67728471194 83162.12696601971 64544.92499814084 79607.6401354396 64325.99605962568 77100.50710886435 74798.63784790231 60854.82476222386 78107.84015014033 0.9556067745067133 1.0204312029561189 1.0647090843398554 0.826356545950719 1.0192016573805693 0.8235536398904011 0.9871033043630489 0.9576329047650401 0.7791128860463635 1.0 16.253179747097686 -5.24709948662112 24.839737321348185 0.9152655930263988 1.0142672359635752 0.2427490159098119 0.08112654666713937 1041.9697317630123 1804909.7070337783 0.020878669400742088 0.0359434091877996 5.661095918301515e-06 5.24709948662112 0.09900164293717639 EEEHDCFLEEIMTK ddPTM_KYSE-520_SHP099_60min_R1 3 EEEHDCFLEEIMTK 14 0 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 0 ;; 142.38 8.9011e-06 110307000.0 258045.0 223934.0 134185.0 191346.0 268217.0 241808.0 210662.0 228961.0 176847.0 200958.0 False True 243730.72945004562 213175.87450821348 142834.7798035911 209531.4663097274 289324.1519540267 240298.78657787654 231957.77082299266 228166.78773089888 144736.04275008058 199177.66846295825 1.223685021171804 1.0702799975181883 0.7171224610963582 1.0519827244021318 1.4525933262836306 1.2064544606443455 1.164577196896602 1.1455440235426384 0.7266680239155306 1.0 17.60369637784795 -7.744780532936845 24.911322507700614 0.8633340176502936 1.125324303372138 0.25045416963236045 0.18376736042539174 308.26418844074874 460976.6633078075 0.136015005638434 0.051096454604108395 1.799780189141324e-08 7.744780532936845 0.26199028572184446 EEEIS(ph)NLKAAFEKNINT(ph)ERTLK ddPTM_KYSE-520_SHP099_60min_R1 1 EEEISNLKAAFEKNINTERTLK 22 3 Q13464;A0A0U1RQV4 Q13464 ROCK1 Rho-associated protein kinase 1 2 EEEIS(0.989)NLKAAFEKNINT(0.989)ERT(0.022)LK 42.309 0.059667 2366600000.0 426380.0 477090.0 484960.0 506290.0 496980.0 414720.0 346700.0 442800.0 570120.0 358690.0 True False 402727.8514325428 454169.88027331035 516221.2975634345 554407.6493783614 536089.4985706065 412131.57864742674 381747.8194659287 441264.0301502965 466600.5795556388 355512.28565659694 1.1328099412619264 1.2775082566682676 1.4520491088234082 1.5594612949997604 1.5079352253059295 1.1592611430748714 1.0737964196114271 1.2412061353528876 1.3124738535937583 1.0 18.43953989124236 -6.279800562772132 24.268465558757388 1.1672009171559181 1.393239449309415 0.4076121704315677 0.13739913932208633 651.3566876335941 860912.0850379122 0.052634013133955125 0.04651230014242125 5.250485183003212e-07 6.279800562772132 0.22603853215349679 EEEIVDWWSK ddPTM_KYSE-520_SHP099_60min_R1 1 EEEIVDWWSK 10 0 Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-3;H0YD14 Q9NZM1-2 MYOF Myoferlin 0 93.325 0.023901 26391000.0 92351.0 110710.0 67208.0 93525.0 115990.0 114920.0 107030.0 105260.0 112180.0 101440.0 False True 87228.1059328457 105391.32542090201 71540.33521660202 102413.58788068336 125117.75310717656 114202.74165259046 117849.63691213849 104894.87762786866 91810.93982767049 100541.32051912576 0.8675846456209265 1.0482389218356611 0.7115515774729958 1.018621869614309 1.2444411159626223 1.1358786722009078 1.1721512737613209 1.0433011729532111 0.9131662420348408 1.0 16.617429017199033 -5.514028052905295 24.714970041557518 1.0973277134507204 0.8883781338279584 0.39393225846573277 0.115017200870792 363.69434096338705 1015593.2919897325 0.03373735745525443 0.04597267612711975 3.061765654995258e-06 5.514028052905295 -0.20894957962276206 EEENKDDEEKPKIEDVGS(ph)DEEDDSGK ddPTM_KYSE-520_SHP099_60min_R1 1 EEENKDDEEKPKIEDVGSDEEDDSGK 26 3 Q58FF8 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 1 EEENKDDEEKPKIEDVGS(1)DEEDDSGK 110.16 0.00059343 864450000.0 648080.0 714140.0 783920.0 547990.0 576300.0 554460.0 410840.0 411610.0 917280.0 514470.0 True False 612129.7104845488 679831.6424540055 834452.737516348 600070.8048407991 621651.5313015424 550999.4094735059 452371.71661200584 410182.22098049644 750725.0747470639 509912.19605160295 1.2004610111788765 1.333232755988458 1.636463579372598 1.1768120266338404 1.2191344629823906 1.0805770360859244 0.8871561027856372 0.8044173568638985 1.4722634221345252 1.0 18.959889319115863 -5.894057536382081 1.7167881532071672 1.0273873874307804 1.3749171450740394 0.32624574998988776 0.1990922395671862 0.4016842651818102 2.433173213458561 0.0744778819358883 0.08928106255005247 1.2762697143157497e-06 5.894057536382081 0.347529757643259 EEENKS(ph)SSEGGDAGNDTR ddPTM_KYSE-520_SHP099_60min_R1 2 EEENKSSSEGGDAGNDTR 18 1 Q9Y3E1;H3BPM9 Q9Y3E1 HDGFRP3 Hepatoma-derived growth factor-related protein 3 1 EEENKS(0.779)S(0.111)S(0.111)EGGDAGNDTR;EEENKS(0.908)S(0.085)S(0.007)EGGDAGNDTR 128.38 2.1204000000000002e-05 498117500.0 528552.0 447489.5 426160.6 452695.0 440528.8 464021.3 516693.6 539430.9 526799.2 484712.1 True False 499232.1669177104 425991.43272456626 453631.5941570683 495718.9966922858 475195.91029399727 461125.17094673845 568926.0315315863 537559.7401120188 431145.74480714 480417.92789430777 1.0391622334034583 0.8867101079922326 0.9442436841300966 1.0318494958442606 0.9891302607644165 0.9598417214941785 1.1842314753431733 1.1189418814326226 0.8974389167716329 1.0 18.873930463951652 EEEPVKK ddPTM_KYSE-520_SHP099_60min_R1 2 EEEPVKK 7 1 Q14103-3;Q14103;H0YA96;H0Y8G5;Q14103-4;Q14103-2;Q99729-3;Q99729-4;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729 Q14103-3;Q99729-3 HNRNPD;HNRNPAB Heterogeneous nuclear ribonucleoprotein D0;Heterogeneous nuclear ribonucleoprotein A/B 0 ; 91.065 0.017724 1340830000.0 1599390.0 1473750.0 1061040.0 1112490.0 1607370.0 1745830.0 1362620.0 1547680.0 1454760.0 1700000.0 False True 1510668.648395079 1402948.8378561516 1129436.3361240255 1218220.715117686 1733860.87431574 1734933.627387244 1500366.9274896563 1542311.4593112264 1190612.2555152606 1684939.3225799866 0.8965715430523257 0.8326405699333731 0.6703127649692616 0.7230056885682631 1.029034607407016 1.0296712790409008 0.890457541932304 0.9153513355897186 0.7066202560292734 1.0 20.684265207859415 -5.749963895980053 24.999624969832084 0.9274442686409196 0.776467493721943 0.3267049020379834 0.10393278291600615 282.2982903236187 614990.9935863941 0.032683387840829185 0.04182105623189495 1.7784272491359474e-06 5.749963895980053 -0.15097677491897654 EEETS(ph)IDVAGKPNEVTK ddPTM_KYSE-520_SHP099_60min_R1 2 EEETSIDVAGKPNEVTK 17 1 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 EEET(0.022)S(0.978)IDVAGKPNEVTK;EEET(0.015)S(0.985)IDVAGKPNEVTK 228.15 8.1195e-19 1720390000.0 1395850.0 1560600.0 1277940.0 2440000.0 2220400.0 2197500.0 2195600.0 2959100.0 3326300.0 1869580.0 True False 1318419.4179420094 1485626.4334916428 1360318.0571762968 2671896.8663872494 2395132.84765217 2183784.587378763 2417552.674991043 2948835.5727591314 2722327.7691993266 1853016.9757112288 0.7114988341841666 0.8017338496974247 0.7341098732536849 1.4419171013593746 1.2925585027265414 1.178502202625844 1.3046575971400007 1.5913699720032535 1.469132665746053 1.0 20.82144466745256 -5.256677258760608 24.973329247130255 1.3417292718847973 0.7543761074736921 0.7432450624621383 0.15501474846083185 195.6668766099895 1026105.4836932017 0.04344419032777108 0.07222409060916792 5.537614781880683e-06 5.256677258760608 -0.5873531644111052 EEEVEEEEKEEDEEKGDWKPR ddPTM_KYSE-520_SHP099_60min_R1 1 EEEVEEEEKEEDEEKGDWKPR 21 3 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 0 159.04 3.0586999999999998e-09 905190000.0 565800.0 483800.0 333030.0 290530.0 423430.0 453670.0 428170.0 441090.0 386890.0 359390.0 False True 534413.9461056637 460557.5218013944 354497.64666684 318141.88384897035 456751.5320128614 450838.4772496585 471453.60213650606 439559.96174118016 316640.52870322176 356206.08420118893 1.5002942673034778 1.2929524290249537 0.9952037946286623 0.8931399489214802 1.2822676317760011 1.2656675369840684 1.3235416884968874 1.2340046429215736 0.8889250991130737 1.0 18.442352633133275 EEEWDPEYT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 EEEWDPEYTPK 11 0 Q9NYF8;Q9NYF8-2;H0YF14;Q9NYF8-4;Q9Y2W1;A0A3B3ITZ9 Q9NYF8;Q9NYF8-4;Q9Y2W1 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 1 EEEWDPEYT(1)PK;EEEWDPEYT(1)PK;EEEWDPEYT(1)PK;EEEWDPEY(0.001)T(0.999)PK 179.67 2.0110999999999998e-05 2881920000.0 4899140.0 4758720.0 3651310.0 3832240.0 3872230.0 4149340.0 3747340.0 3901700.0 4553890.0 4196940.0 True False 4627374.93800654 4530103.948215655 3886679.284902564 4196454.9373950325 4176952.4710251065 4123442.429940478 4126157.697714029 3888165.9133636234 3727018.3702249085 4159758.3767699087 1.1124143565280202 1.08903054886888 0.9343521745415911 1.0088218010041292 1.0041334358147382 0.9912696980112508 0.9919224445238161 0.9347095579101449 0.8959699176371329 1.0 21.988068299911777 -1.0000000050199784 0.503594728067256 0.9597360305360323 6.419511117590735 0.5813240219444613 0.040951189831529816 78.33644961575985 0.8260196175156462 0.02315063012016686 453.1753660977245 0.09999999884410726 1.0000000050199784 5.4597750870547035 EEFEHQQK ddPTM_KYSE-520_SHP099_60min_R1 1 EEFEHQQK 8 0 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PS65;E9PM13 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 94.11399999999999 0.012317 484220000.0 573710.0 550230.0 430410.0 514050.0 671320.0 562850.0 551540.0 578000.0 539890.0 539060.0 False True 541885.1626374688 523796.12488793215 458154.91728034953 562905.157445232 724149.0647116986 559337.0443713929 607295.0457116774 575995.0529062146 441859.5855193529 534284.3477823334 1.0142261604456209 0.9803695860866317 0.8575113966598945 1.053568497339845 1.3553626785389488 1.0468901937573998 1.136651388408422 1.078068364340095 0.8270120346092673 1.0 19.02724822749948 -5.5056063800755215 24.58707673568306 1.091022482653314 0.9539808818539831 0.14902526603281996 0.12872141710355306 1042.6808300306388 1484247.3768539329 0.03757017945639635 0.054292729908355764 3.121717650397498e-06 5.5056063800755215 -0.1370416007993308 EEFTAFLHPEEFEHMK ddPTM_KYSE-520_SHP099_60min_R1 12 EEFTAFLHPEEFEHMK 16 0 Q15293;Q15293-2;E9PP27 Q15293 RCN1 Reticulocalbin-1 0 ;;;;;;;;;;; 232.28 7.176600000000001e-23 2537465000.0 4099738.0 3290428.0 2182888.0 2239659.0 4092300.0 3523425.0 2777606.0 2717223.0 2831805.0 2700379.0 False True 3872317.3605149114 3132350.899846876 2323600.4532242883 2452515.5179819693 4414340.727998093 3501433.997626858 3058393.521302224 2707797.587617614 2317620.5959947994 2676455.7429230697 1.4468079178046827 1.1703353990176217 0.8681632264490899 0.9163295617597151 1.6493232662898456 1.3082353432837992 1.1427028186021952 1.011710204727807 0.8659289816851702 1.0 21.351892366197777 -7.276338722037378 2.834607443350843 0.9371748267422974 1.2125837519704816 0.2319497994234696 0.2178352894921873 0.47741188402696605 7.60436873519889 0.1497379080635192 0.06674693613415014 5.292505011930383e-08 7.276338722037378 0.2754089252281843 EEFTAFLHPEEYDYMK ddPTM_KYSE-520_SHP099_60min_R1 5 EEFTAFLHPEEYDYMK 16 0 O43852;O43852-3;O43852-6;O43852-10;O43852-2;O43852-4;H0Y875;O43852-15 O43852 CALU Calumenin 0 ;;;; 207.39 1.1971e-13 1762440000.0 3553620.0 3082020.0 1847120.0 2000650.0 3211040.0 3310180.0 2680300.0 2405580.0 2384230.0 2759640.0 False True 3356493.6146341544 2933955.1329936674 1966188.310696493 2190791.1744826436 3463730.5796816004 3289519.938771073 2951250.881207179 2397235.6044465946 1951313.9335472167 2735191.7365674297 1.227151124274175 1.0726689079119838 0.7188484391825455 0.8009643876856729 1.2663575037077517 1.2026652079971936 1.0789923213613155 0.8764415204964906 0.7134102913004731 1.0 21.38321053861233 -7.338246224356973 5.258219609528439 0.8401562622768272 1.0446041637628727 0.18909664968526319 0.17806696984927867 0.4133828389163235 20.395457589173724 0.11109033061256683 0.051897830786626645 4.5893774314718163e-08 7.338246224356973 0.20444790148604552 EEGAAPS(ph)PTHVAELATMEVESAR ddPTM_KYSE-520_SHP099_60min_R1 3 EEGAAPSPTHVAELATMEVESAR 23 0 Q9NRS6 Q9NRS6 SNX15 Sorting nexin-15 1 EEGAAPS(0.967)PT(0.033)HVAELATMEVESAR;EEGAAPS(0.967)PT(0.033)HVAELATMEVESAR;EEGAAPS(0.961)PT(0.039)HVAELATMEVESAR 249.91 7.4553e-29 276321000.0 287946.0 303441.0 242573.0 236106.0 246694.0 296861.0 252846.0 307698.0 322310.0 297160.0 True False 271973.0613738797 288863.2388857732 258209.6437105227 258545.44325214278 266107.4143031452 295008.1803840035 278406.14121915837 306630.66745525325 263786.6287739034 294527.393586982 0.9234219542759056 0.9807686659219492 0.8766914362900046 0.8778315663727464 0.9035064992165369 1.0016324009497592 0.9452639967661868 1.0410938816959205 0.8956268059188186 1.0 18.168042297810565 -6.252896382447233 24.69402377018995 0.9773255712369646 0.9123306656420817 0.3380962735258627 0.04496550706060995 642.8170070739718 1858100.1031215175 0.014804939092909138 0.014570477102625747 5.586034550499659e-07 6.252896382447233 -0.06499490559488297 EEGAQTLEEDRAQT(ph)PHEDGGPQPHR ddPTM_KYSE-520_SHP099_60min_R1 2 EEGAQTLEEDRAQTPHEDGGPQPHR 25 1 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 EEGAQTLEEDRAQT(1)PHEDGGPQPHR;EEGAQTLEEDRAQT(1)PHEDGGPQPHR 249.1 1.0496e-28 497460000.0 374080.0 336500.0 321990.0 324950.0 335260.0 305570.0 266720.0 292050.0 385930.0 264240.0 True False 353329.03669000755 320334.0349032025 342745.99060221534 355833.1503002199 361643.0546315372 303662.8242845639 293682.6605363502 291036.9467149822 315854.8405035914 261899.03917560913 1.3491039822146602 1.2231203135052795 1.308695105110319 1.3586653521917882 1.38084910799939 1.1594652093433273 1.121358296925364 1.1112562597827458 1.2060175611862542 1.0 17.99865124134515 -6.385186574106423 4.908856011952804 1.1217841096701384 1.3189652279595583 0.7352516110443664 0.06162124886161694 0.12927295987823872 4.635504613304385 0.02231066716586865 0.01950551975192822 4.1192051888991846e-07 6.385186574106423 0.19718111828941987 EEGDLGPVYGFQWR ddPTM_KYSE-520_SHP099_60min_R1 1 EEGDLGPVYGFQWR 14 0 P04818-2;P04818 P04818-2 TYMS Thymidylate synthase 0 164.1 2.6886e-07 506020000.0 195370.0 214550.0 149010.0 163810.0 172040.0 181190.0 142200.0 185090.0 214380.0 204740.0 False True 184532.43663956044 204242.69595388422 158615.42302442977 179378.45314872757 185578.56922630128 180059.1260009819 156574.96373826102 184447.96599033076 175453.99608001433 202926.16288530972 0.9093575417569735 1.0064877443591076 0.7816410696834415 0.8839592224000663 0.9145127793658967 0.8873135106918083 0.7715858887390209 0.9089412787772343 0.8646198872797779 1.0 17.63059535545838 -4.743312296472044 24.999999872763507 0.8715726074224869 0.9579226184887104 0.19464009704773721 0.06556341285143391 356.1786730701272 491216.70618422097 0.015840250709340167 0.04173147170273694 1.805875073735573e-05 4.743312296472044 0.08635001106622353 EEGGCSLASTPATTLHLLQLS(ph)GQR ddPTM_KYSE-520_SHP099_60min_R1 1 EEGGCSLASTPATTLHLLQLSGQR 24 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 EEGGCSLASTPATTLHLLQLS(1)GQR 87.868 0.0030012 100030000.0 29984.0 29452.0 34051.0 39048.0 28226.0 26530.0 28407.0 28705.0 34593.0 26689.0 True False 28320.727748377867 28037.08171164673 36245.981943526305 42759.1101797907 30447.225616028692 26364.41642919617 31278.656785603238 28605.429054797358 28311.78321856486 26452.556223727785 1.070623478080895 1.059900656651762 1.3702260619718059 1.616445299960691 1.1510126037920567 0.9966680046424945 1.182443636866613 1.081386192429239 1.0702853432807131 1.0 14.691119522421957 -5.989542733325078 24.99813168252285 1.0779921767185259 1.2843231822724128 0.29689099617738746 0.15407623506610596 311.5010081202708 744639.1242034731 0.05249022470986047 0.05945871203520801 1.0243709801997461e-06 5.989542733325078 0.20633100555388695 EEGGEGT(ph)PVKQDLSAPPGYTLTENVAR ddPTM_KYSE-520_SHP099_60min_R1 1 EEGGEGTPVKQDLSAPPGYTLTENVAR 27 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 EEGGEGT(1)PVKQDLSAPPGYTLTENVAR 76.765 0.047556 312730000.0 210220.0 247240.0 198500.0 184420.0 184750.0 243300.0 198560.0 227310.0 310870.0 248930.0 True False 198558.67753681942 235362.21928519412 211295.62761122966 201947.22135210506 199288.7739162935 241781.4744524475 218632.38255885473 226521.51466455255 254423.8443949719 246724.6738646092 0.8047783564840337 0.9539468250117121 0.8564025004129854 0.8185124665031439 0.807737510783594 0.9799647139674635 0.8861391085628907 0.9181145570744854 1.0312055150778623 1.0 17.912542474963814 -7.301618128054146 0.8872926351447928 1.013658039073611 0.8599691385936681 0.5055671276888578 0.055739555398860725 0.5212373172186023 0.7470862483002566 0.05151209762734484 0.02151622326958374 4.993233458372098e-08 7.301618128054146 -0.15368890047994288 EEGKGPVAVTGAST(ph)PEGTAPPPPAAPAPPKGEK ddPTM_KYSE-520_SHP099_60min_R1 2 EEGKGPVAVTGASTPEGTAPPPPAAPAPPKGEK 33 2 Q9H0W8-2;Q9H0W8;M0QYR7;M0R2N0;M0QZC7 Q9H0W8-2 SMG9 Protein SMG9 1 EEGKGPVAVTGAS(0.048)T(0.949)PEGT(0.004)APPPPAAPAPPKGEK;EEGKGPVAVT(0.002)GAS(0.189)T(0.761)PEGT(0.048)APPPPAAPAPPKGEK 100.22 0.00094515 2398950000.0 942870.0 1152350.0 894850.0 733710.0 687410.0 1151990.0 713970.0 872550.0 1283970.0 1031220.0 True False 890567.121535253 1096989.3762873872 952533.462810624 803441.5778020455 741505.2561721212 1144800.0031010062 786145.0552757123 869523.3277047012 1050833.4142497252 1022084.1930770205 0.8713246203858894 1.073286705457074 0.9319520537177945 0.7860815999739281 0.7254835376524056 1.1200642871254525 0.7691588037468762 0.8507355202187118 1.0281280361905942 1.0 19.963082610934137 -9.562523023738509 14.209704643482574 1.0000052641680592 0.9036884706264242 0.04694559110724139 0.12625534842093225 0.0 0.0 0.12243816356094518 0.029695616527554616 2.7382744632133616e-10 9.562523023738509 -0.09631679354163503 EEGS(ph)DIEDEDMEELLNDTR ddPTM_KYSE-520_SHP099_60min_R1 6 EEGSDIEDEDMEELLNDTR 19 0 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 EEGS(1)DIEDEDMEELLNDTR;EEGS(1)DIEDEDMEELLNDTR;EEGS(1)DIEDEDMEELLNDTR;EEGS(1)DIEDEDMEELLNDTR;EEGS(1)DIEDEDMEELLNDTR;EEGS(1)DIEDEDMEELLNDTR 267.39 4.2444999999999995e-30 864585000.0 866688.0 822933.0 737970.0 718358.0 765719.0 762553.0 714358.0 823945.0 955982.0 781984.0 True False 818611.0889403055 783398.0634323846 785540.7269937479 786630.5283377925 825976.7289548604 757793.6238723275 786572.2781022273 821086.9271052094 782399.7671450886 775056.2301343465 1.0561957405315086 1.0107628749679132 1.0135274015636053 1.0149334948271298 1.0656991026466394 0.9777272853364113 1.0148583386858068 1.0593901386521132 1.0094748441793304 1.0 19.563941455782622 -12.296391851887396 1.2459193769976011 5.3980827921317354e-05 1.0242536681146768 0.07435101761645613 0.02613013354542712 584260.3698711242 5506.33705111923 1659765.556457336 0.006927914732529055 5.05368476247394e-13 12.296391851887396 1.0241996872867554 EEGSLS(ph)DTEADAVSGQLPDPTTNPSAGK ddPTM_KYSE-520_SHP099_60min_R1 1 EEGSLSDTEADAVSGQLPDPTTNPSAGK 28 0 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 EEGS(0.161)LS(0.679)DT(0.161)EADAVSGQLPDPTTNPSAGK 152.82 4.4479e-07 739450000.0 511630.0 493170.0 371130.0 404730.0 396230.0 491300.0 488860.0 547340.0 534690.0 552810.0 True False 483248.8639908813 469477.37293673854 395053.6336289958 443195.4175134881 427411.0467596918 488233.6144615188 538278.7396138279 545441.4052901159 437603.77443802 547912.5334796725 0.8819817661805865 0.8568472963288329 0.7210158729534744 0.8088798675563252 0.7800716732017386 0.8910794782533155 0.9824172778004137 0.995489922134354 0.7986745104348942 1.0 19.0635860800558 -6.4609257871360475 4.2200695110785285 0.9435525389513191 0.8081077639634697 0.47426896593251444 0.06689779034797737 0.2023859700584168 7.179527007173371 0.025140865725855246 0.021323865312846257 3.459984974942498e-07 6.4609257871360475 -0.13544477498784935 EEGSLSDT(ph)EADAVSGQLPDPTTNPSAGK ddPTM_KYSE-520_SHP099_60min_R1 2 EEGSLSDTEADAVSGQLPDPTTNPSAGK 28 0 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 EEGS(0.285)LS(0.285)DT(0.43)EADAVSGQLPDPTTNPSAGK;EEGS(0.066)LS(0.421)DT(0.513)EADAVSGQLPDPTTNPSAGK 143.47 8.2113e-08 567880000.0 470370.0 486580.0 394770.0 320150.0 408410.0 484180.0 433000.0 522840.0 542770.0 520820.0 True False 444277.63844065147 463203.9664285295 420217.5058543333 350576.95974339277 440549.54346497153 481158.05302254803 476771.86567276384 521026.3900717731 444216.650118245 516205.9399918289 0.8606596786694938 0.8973239758454961 0.8140501170152845 0.6791416614635277 0.8534375708112639 0.9321048359694666 0.9236078641022819 1.0093382305519778 0.8605415313998063 1.0 18.97758721708421 -6.20573313844491 3.7456693950683704 0.94556098481678 0.8141095403195107 0.48137544170516733 0.06525483918316435 0.22308924499423644 6.397261524726117 0.023849336615770864 0.023244717884898576 6.226827884272838e-07 6.20573313844491 -0.1314514444972693 EEHGGLIR ddPTM_KYSE-520_SHP099_60min_R1 2 EEHGGLIR 8 0 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 0 ; 138.54 0.0011171 587520000.0 258620.0 230350.0 166184.0 173542.0 255900.0 250990.0 188405.0 240980.0 202435.0 212286.0 False True 244273.8330538116 219283.64023760086 176896.48654380144 190035.37950269494 276037.8741281707 249423.47830998705 207450.81605560542 240144.09662515504 165677.9069710687 210405.3111960087 1.1609679986939672 1.042196316200979 0.8407415456305131 0.9031871791756358 1.3119339647801012 1.1854428811334992 0.9859580771815644 1.1413404693070812 0.7874226464593711 1.0 17.682811597030106 -7.7551022463324815 24.997408590092235 0.8937113129482912 1.0661588419716397 0.20411903625109507 0.14008885248106484 238.62098628239175 941290.203001977 0.10658404823324331 0.03806917235413076 1.7575097931685617e-08 7.7551022463324815 0.17244752902334848 EEHGGLIRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 17 EEHGGLIRSPR 11 1 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR;EEHGGLIRS(1)PR 130.61 9.6186e-05 100901830000.0 24635540.0 23890080.0 25262810.0 19573170.0 22233260.0 21147220.0 18981080.0 19919560.0 29538640.0 19208330.0 True False 23268957.486468546 22742364.697058827 26891291.15452516 21433398.19191186 23982891.072055068 21015232.355817016 20899872.803889103 19850463.695620272 24175167.5845179 19038159.14005459 1.222227281287545 1.194567422709001 1.4124942940490648 1.1258125344071686 1.259727418792146 1.1038479193927337 1.0977885335519457 1.0426671796148959 1.2698269515803922 1.0 24.18239065084537 -6.265624370204308 22.964323081286427 1.1051779447667893 1.2431867345862588 0.35889743111858396 0.09362379541552207 134.2508528195662 736670.1349276834 0.031285065820194136 0.028622220284186872 5.424698803676923e-07 6.265624370204308 0.1380087898194695 EEHLCTQR ddPTM_KYSE-520_SHP099_60min_R1 6 EEHLCTQR 8 0 J3KN67;P06753-7;P06753-5;P06753-2;A0A087WWU8 J3KN67;P06753-5 TPM3 Tropomyosin alpha-3 chain 0 ;;;;; 144.09 0.00092117 5280082000.0 3057465.0 2822280.0 2154707.0 1940000.0 3173414.0 2894379.0 2303076.0 2702907.0 2526594.0 2623398.0 False True 2887861.321544628 2686693.4324713508 2293602.860873094 2124377.016717732 3423143.627544251 2876314.107045622 2535893.397935719 2693531.246480239 2067828.2198516077 2600156.734692761 1.1106489401247046 1.033281339014671 0.8821017711242356 0.8170188313546998 1.3165143400283272 1.106207971491954 0.9752848219110778 1.0359111089503268 0.7952706051375574 1.0 21.310167159327403 -7.728665121514358 24.77364950624122 0.8976352711120515 1.0320439484957595 0.13908508293406363 0.1362042836412944 316.72941366990364 239412.5239537935 0.09639081961516868 0.03642636697243656 1.8678193854680416e-08 7.728665121514358 0.134408677383708 EEHRLS(ph)ATQQSELR ddPTM_KYSE-520_SHP099_60min_R1 5 EEHRLSATQQSELR 14 1 A0A2R8YFR7;A0A2R8YF49;A0A5F9ZGZ6;Q12774;A0A5F9ZH52;A5YM69 A0A2R8YFR7;Q12774;A0A5F9ZH52 ARHGEF5;ARHGEF35 Rho guanine nucleotide exchange factor 5;Rho guanine nucleotide exchange factor 35 1 EEHRLS(0.998)AT(0.002)QQSELR;EEHRLS(0.998)AT(0.002)QQSELR;EEHRLS(0.918)AT(0.041)QQS(0.041)ELR;EEHRLS(1)ATQQSELR;EEHRLS(0.996)AT(0.004)QQSELR 223.06 2.8491000000000003e-14 2945131000.0 1356899.0 1462670.0 1411320.0 1641620.0 1337393.0 1400168.0 1311730.0 1344645.0 1589912.0 1282181.0 True False 1281629.1075589058 1392401.1376875695 1502295.9453918408 1797639.0712289503 1442638.2203747425 1391429.0321460513 1444332.4696511207 1339980.7403375008 1301224.0592199245 1270821.873861725 1.0085041294295165 1.095669791594312 1.1821451741515285 1.4145484179984669 1.1352009672220298 1.0949048491885254 1.136534159002267 1.0544205823791957 1.0239232468243677 1.0 20.277330396908933 -7.245416587948521 1.142861919751602 1.0035019585706093 1.1698519461082404 0.26995558282722265 0.0983208622333011 0.7437041588914397 1.7179381353825522 0.09291945512867565 0.03657307985395737 5.683075321249733e-08 7.245416587948521 0.16634998753763108 EEHS(ph)KTPEER ddPTM_KYSE-520_SHP099_60min_R1 1 EEHSKTPEER 10 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EEHS(0.5)KT(0.5)PEER 68.676 0.016781 913710000.0 744520.0 544830.0 449850.0 582270.0 590340.0 671440.0 718580.0 525880.0 782610.0 700350.0 True False 703219.9914361764 518655.54899349745 478848.0507854489 637608.7657341409 636796.3994248701 667249.2939019776 791221.079064976 524055.8450213152 640507.7519926298 694145.4438640559 1.0130729772158493 0.747185699449859 0.6898382104474755 0.9185521152235822 0.9173818038479884 0.9612528610540794 1.139849128246863 0.7549654753967503 0.9227284536035496 1.0 19.404878455910335 -5.491659474552906 20.012376212707693 0.9445699301242073 0.8088217423926881 0.20210405184995506 0.11761187074190538 93.48868234562335 59927.05264981421 0.033724085185778824 0.04986634190384695 3.223595385713316e-06 5.491659474552906 -0.1357481877315192 EEHSKT(ph)PEER ddPTM_KYSE-520_SHP099_60min_R1 3 EEHSKTPEER 10 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EEHS(0.229)KT(0.771)PEER;EEHS(0.143)KT(0.857)PEER;EEHS(0.162)KT(0.838)PEER 88.101 0.004287399999999999 364340000.0 395910.0 338462.0 281744.0 275284.0 362812.0 384789.0 367331.0 326825.0 416316.0 381264.0 True False 373948.08307298156 322201.7774781804 299905.66904633876 301446.90859284764 391363.24028210185 382387.3891207674 404464.40228508576 325691.32035652857 340723.5088723166 377886.2975789038 0.989578308260569 0.8526421295043219 0.7936399678099404 0.7977185479447151 1.0356640153123944 1.0119112324810449 1.0703336026642574 0.8618765021203851 0.9016561623306083 1.0 18.527592680853243 -5.761273522105854 24.999999735089375 0.9794222955979364 0.8533584947697049 0.3798899854359009 0.07615119324839531 5.101281941337138 768831.0782143933 0.02491370554778961 0.03016058502534461 1.7327123780499345e-06 5.761273522105854 -0.12606380082823143 EEIFRES(ph)PIPIEIPPAAVPSYVPESR ddPTM_KYSE-520_SHP099_60min_R1 1 EEIFRESPIPIEIPPAAVPSYVPESR 26 1 Q5TC82-2;Q5TC82 Q5TC82-2 RC3H1 Roquin-1 1 EEIFRES(1)PIPIEIPPAAVPSYVPESR 77.733 0.010043999999999999 64429000.0 35486.0 45538.0 35975.0 29051.0 34692.0 34415.0 25865.0 37985.0 43605.0 29244.0 True False 33517.52084041278 43350.286126068466 38294.00606203519 31811.99830549836 37422.063029521276 34200.20321940393 28479.68661807401 37853.238900765646 35687.43119259737 28984.92091148773 1.1563778608458655 1.4956151254802024 1.3211699344971455 1.0975361431084727 1.291087291347054 1.1799308793645595 0.9825690642746078 1.3059631598222885 1.2312412823749745 1.0 14.823014928616761 -5.168659374176262 6.4138638956443055 1.1679632914896338 1.3445715416879973 0.26055664683061497 0.12820263331553544 0.3191499777622445 18.44153442273175 0.034000317077784295 0.05952594784271789 6.781732038427178e-06 5.168659374176262 0.17660825019836346 EEIKDDNPHLK ddPTM_KYSE-520_SHP099_60min_R1 6 EEIKDDNPHLK 11 1 Q9HAV7 Q9HAV7 GRPEL1 GrpE protein homolog 1, mitochondrial 0 ;;;;; 135.66 0.00011235 5385100000.0 9881360.0 9807480.0 6020700.0 5940550.0 10436860.0 9739360.0 7369230.0 8436360.0 8762270.0 7600960.0 False True 9333221.262797201 9336313.939472392 6408803.955460597 6505138.085908509 11258181.504389755 9678573.041607844 8114183.68515405 8407096.236221237 7171262.646851518 7533621.407857388 1.2388758018902932 1.2392863184941625 0.8506936582685675 0.8634808857163706 1.4943917267527858 1.2847172053951799 1.077062842140056 1.1159435523867494 0.9519011188128012 1.0 22.8449121037071 -7.650075570837299 3.1796070777885608 0.9743699473877312 1.1472623616814166 0.122156324887848 0.18211415060913735 0.6232557151717096 11.741968671130879 0.16734213778872456 0.052206864831297745 2.238331616436959e-08 7.650075570837299 0.1728924142936854 EEILQPPEPHPVPPILT(ph)PS(ph)PPSAFPTVTTVWQDNDRYHPK ddPTM_KYSE-520_SHP099_60min_R1 2 EEILQPPEPHPVPPILTPSPPSAFPTVTTVWQDNDRYHPK 40 1 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 EEILQPPEPHPVPPILT(0.992)PS(0.961)PPS(0.027)AFPT(0.006)VT(0.006)T(0.006)VWQDNDRY(0.003)HPK;EEILQPPEPHPVPPILT(0.998)PS(0.936)PPS(0.043)AFPT(0.008)VT(0.007)T(0.007)VWQDNDRY(0.002)HPK 52.158 0.043039 240640000.0 170451.0 162794.0 148105.0 145829.0 143071.0 151358.0 136543.0 133067.0 183203.0 158450.0 True False 160995.7432443554 154973.13188122425 157652.0852763787 159688.54431491237 154329.87373736434 150413.31857860065 150346.09897126132 132605.42163507122 149937.95337180173 157046.2562722348 1.025148558557641 0.9867992753204071 1.003857646903048 1.0168249030915912 0.9827032964723355 0.9577644329060849 0.9573364086479147 0.8443717461510438 0.9547375208479274 1.0 17.260830026329224 -6.415208377061683 1.6156017142571109 0.9253000284384783 1.0057772640609637 0.3837047270881976 0.03842876941362272 0.3436003673007499 1.792731964914953 0.017334365380439257 0.014014291998044852 3.844072968951737e-07 6.415208377061683 0.08047723562248543 EEILQPPEPHPVPPILTPS(ph)PPSAFPTVTTVWQDNDR ddPTM_KYSE-520_SHP099_60min_R1 1 EEILQPPEPHPVPPILTPSPPSAFPTVTTVWQDNDR 36 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 EEILQPPEPHPVPPILT(0.019)PS(0.944)PPS(0.037)AFPTVTTVWQDNDR 200.53 1.3449000000000002e-15 69798000.0 9793.3 12884.0 9653.1 9266.2 10481.0 14193.0 10267.0 13064.0 11577.0 15906.0 True False 9250.046126540454 12265.033300721725 10275.354271506096 10146.856862015382 11305.79507126751 14104.416222373968 11304.888556263903 13018.684033160525 9474.90863242059 15765.085214680748 0.5867425390080755 0.777987123678868 0.6517791773137699 0.6436284183587181 0.7171413866345193 0.8946615911241422 0.717083885200733 0.825792176564785 0.6010058622199754 1.0 13.944445347760679 -6.010806904685174 21.81556793945878 0.7927950046307022 0.6731841636247586 0.27614704442264393 0.10802884063259906 146.3890278820921 295514.6429635371 0.03267363778473228 0.034721240824481685 9.754232324286827e-07 6.010806904685174 -0.11961084100594355 EEILQPPEPHPVPPILTPS(ph)PPSAFPTVTTVWQDNDRYHPK ddPTM_KYSE-520_SHP099_60min_R1 2 EEILQPPEPHPVPPILTPSPPSAFPTVTTVWQDNDRYHPK 40 1 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 EEILQPPEPHPVPPILT(0.002)PS(0.994)PPS(0.004)AFPTVTTVWQDNDRYHPK;EEILQPPEPHPVPPILT(0.002)PS(0.708)PPS(0.017)AFPT(0.02)VT(0.126)T(0.126)VWQDNDRYHPK 123.48 2.5183000000000003e-05 670120000.0 174705.0 172758.0 136198.0 161411.0 151841.0 150875.0 142036.0 172347.0 187822.0 182111.0 True False 165013.76538421668 164458.4463649555 144977.54100450495 176751.4529100132 163790.02284288983 149933.33316076046 156394.38501777532 171749.168483092 153718.25940731636 180497.63822021428 0.9142156485332696 0.9111390486135319 0.8032101828813216 0.9792452391779742 0.907435822750542 0.8306664543601165 0.8664622238822204 0.951531389422122 0.8516358492168966 1.0 17.461620434262407 -10.889562764412725 2.47916988115007 1.0579664453470532 0.8910681152730244 0.2915253509058028 0.05115202509062536 17399479.404146813 9589101.687940255 5900189.928011579 0.012513888802996875 1.28954717855577e-11 10.889562764412725 -0.16689833007402877 EEIPVQEKT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 EEIPVQEKTPK 11 1 Q96B01-2;Q96B01;Q96B01-3;H0YGT5;F5H1Y0;H0YFK6;F5H4V6;F5H031;F5H710 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 EEIPVQEKT(1)PK;EEIPVQEKT(1)PK;EEIPVQEKT(1)PK;EEIPVQEKT(1)PK;EEIPVQEKT(1)PK 137.46 0.00028991 5070590000.0 7516880.0 7483080.0 6442970.0 5232340.0 5902350.0 6672930.0 5719850.0 6023130.0 8092920.0 6923590.0 True False 7099903.681871221 7123581.604467926 6858294.155316491 5729620.020439622 6366831.365222375 6631281.768672294 6298068.258356488 6002237.167839106 6623449.733911132 6862252.379071515 1.0346316762590217 1.0380821355672392 0.9994231888399943 0.8349474347393294 0.9278048975056536 0.9663418659588162 0.9177844110724236 0.8746744998981265 0.965200544665381 1.0 22.71025075545572 -5.022338891432762 16.761435363320814 0.9223545605248802 1.0319578866557941 0.5103839149521467 0.044506311476945004 8.244230183734846 6187.334121037647 0.011750103695964432 0.020818281320832795 9.498633010174402e-06 5.022338891432762 0.10960332613091395 EEIQETQT(ph)PTHSR ddPTM_KYSE-520_SHP099_60min_R1 1 EEIQETQTPTHSR 13 0 H7BZL0;Q9BYG3 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 EEIQETQT(0.998)PT(0.002)HSR 119.96 0.00076095 0.0 19453.0 21116.0 25851.0 13825.0 16066.0 21095.0 17485.0 18315.0 20705.0 19487.0 True False 18373.903311405917 20101.55566423781 27517.39682306243 15138.92384336218 17330.302796964384 20963.338280207052 19252.554437155388 18251.46953975313 16945.49393057513 19314.360340656593 0.9513078863258536 1.0407569968508963 1.4247117863457535 0.7838169929705024 0.897275524081645 1.0853757468777971 0.9968000025674625 0.9449688841796078 0.8773520650800422 1.0 14.237386278261216 -5.293707441541383 24.99996379390537 0.945049517190756 1.1291090650224065 0.30710549847705104 0.13603337217088438 849.4393980322387 658108.7542367026 0.039278474020590676 0.05826385941884777 5.0850187479155324e-06 5.293707441541383 0.18405954783165046 EEIS(ph)GSPERDICDDIK ddPTM_KYSE-520_SHP099_60min_R1 1 EEISGSPERDICDDIK 16 1 Q3T8J9-3;Q3T8J9;A0A087WUE6;Q3T8J9-2 Q3T8J9-3 GON4L GON-4-like protein 1 EEIS(0.802)GS(0.198)PERDICDDIK 106.19 0.00086049 272090000.0 288040.0 235050.0 247360.0 226720.0 239050.0 232480.0 254030.0 238600.0 311270.0 240050.0 True False 272061.8470064955 223757.84518275686 263305.22138999327 248267.4006341465 257861.87499155587 231029.00608592256 279709.8314938854 237772.35228965865 254751.21447815094 237923.3437560741 1.1434853037599422 0.9404619221061381 1.1066809050058637 1.0434764269649701 1.0838023328048185 0.9710228615598989 1.1756300457035103 0.9993653776715149 1.0707281196389424 1.0 17.860137302605583 -9.288026606717558 1.1019467991311043 0.9992695365936383 1.0568725967844508 0.05894543164960797 0.07030883142943832 84.8472914147051 66.64559575211584 0.35804934872585875 0.019190935661826256 5.151970804618276e-10 9.288026606717558 0.057603060190812516 EEIVDKYDLFVGSQATDFGEALVR ddPTM_KYSE-520_SHP099_60min_R1 8 EEIVDKYDLFVGSQATDFGEALVR 24 1 O43852;O43852-3;O43852-5;O43852-6;O43852-2;O43852-4;O43852-9;H0Y875;O43852-15;O43852-8 O43852 CALU Calumenin 0 ;;;;;;; 218.87 4.5923e-21 1359086000.0 2205091.0 1891251.0 1293267.0 2775558.0 1646707.0 1289462.0 1627532.0 2139922.0 1654995.0 1135320.0 False True 2082770.206490073 1800392.4631343752 1376633.060120363 3039346.197818056 1776293.472418823 1281413.989356358 1792058.8177416285 2132499.1100435476 1354489.627028843 1125261.948065594 1.850920321326518 1.5999763132747702 1.223388973995694 2.7010121536971106 1.5785599748328811 1.1387695030114549 1.592570352905211 1.895113501091427 1.2037105043472835 1.0 20.101829452708795 -5.991367662814691 24.998260114831123 1.4275279423134686 1.8268018201794975 0.218514777968858 0.41743422933364827 368.0180622903867 1065729.8750659102 0.13117610251439474 0.14851850641317305 1.0200755476945337e-06 5.991367662814691 0.39927387786602897 EEKDKDDQEWES(ph)PSPPKPTVFISGVIAR ddPTM_KYSE-520_SHP099_60min_R1 1 EEKDKDDQEWESPSPPKPTVFISGVIAR 28 3 P51397 P51397 DAP Death-associated protein 1 1 EEKDKDDQEWES(0.896)PS(0.104)PPKPTVFISGVIAR 134.78 3.5612e-06 8196200000.0 637550.0 668010.0 666810.0 651790.0 552860.0 562390.0 468600.0 518740.0 786900.0 460740.0 True False 602183.830575584 635917.7968965484 709793.6395337225 713735.925632191 596366.9366568986 558879.9154020217 515970.66109528183 516940.61201482645 644018.7961347295 456658.20205029624 1.3186751663977767 1.3925465348950603 1.5543214516829067 1.5629543549807527 1.3059372063817982 1.2238473170804163 1.1298837046585073 1.1320077241443935 1.4102862781030208 1.0 18.80075522024158 -6.041399277250678 3.1765483039416833 1.185141476898229 1.458852541520512 0.5501023348985012 0.11767760366189645 0.20333460334840348 4.133452171543893 0.040793067093242374 0.04306920359202574 9.090771102376228e-07 6.041399277250678 0.2737110646222831 EEKDKDDQEWESPS(ph)PPKPTVFISGVIAR ddPTM_KYSE-520_SHP099_60min_R1 4 EEKDKDDQEWESPSPPKPTVFISGVIAR 28 3 P51397 P51397 DAP Death-associated protein 1 1 EEKDKDDQEWES(0.016)PS(0.984)PPKPTVFISGVIAR;EEKDKDDQEWES(0.002)PS(0.998)PPKPTVFISGVIAR;EEKDKDDQEWES(0.007)PS(0.993)PPKPTVFISGVIAR;EEKDKDDQEWES(0.009)PS(0.991)PPKPTVFISGVIAR 182.11 3.4393000000000003e-11 25299090000.0 3379950.0 3654300.0 3729280.0 2950960.0 2915660.0 3015400.0 2620740.0 3012070.0 4412140.0 2640196.0 True False 3192457.4357367195 3478741.942783874 3969675.355858976 3231418.351161522 3145105.854163898 2996579.770094165 2885669.975157594 3001621.8321924205 3611006.5969982 2616805.917481407 1.2199825040174774 1.3293847738360562 1.5169926548009578 1.2348712335042638 1.201887321162497 1.145128780883482 1.1027451275159756 1.147055581057913 1.3799290856364614 1.0 21.31937549628162 -5.495318950065885 9.79787907598741 1.1708960525366554 1.356797201544558 0.37175804899929465 0.11174593447548908 0.5276661819288005 182.62166848153265 0.03168190487518957 0.045901436321409236 3.196546672661734e-06 5.495318950065885 0.18590114900790256 EEKEES(ph)DDEAAVEEEEEEKKPK ddPTM_KYSE-520_SHP099_60min_R1 2 EEKEESDDEAAVEEEEEEKKPK 22 3 P14625 P14625 HSP90B1 Endoplasmin 1 EEKEES(1)DDEAAVEEEEEEKKPK;EEKEES(1)DDEAAVEEEEEEKKPK 162.03 2.5595e-09 2472070000.0 278490.0 203302.0 161470.0 225867.0 216452.0 186226.0 224874.0 264980.0 226834.0 189648.0 True False 263041.60454394855 193535.06675747686 171878.61456113445 247333.3317706103 233485.54095658756 185063.69445697273 247606.45847874653 264060.846226797 185646.66361980553 187967.86626391154 1.3993966616327476 1.0296178309847324 0.9144042435413542 1.3158277352754975 1.2421566813381182 0.9845496367828037 1.3172807852758244 1.4048190867690598 0.9876510666943095 1.0 17.52012652387109 -5.299379649139066 24.975982201150167 1.1960691758290074 1.1059868250733398 0.019131318217236126 0.18165412030876857 1890.6985992277323 1244638.320125886 0.051135014016604835 0.07584794531082785 5.019036463507983e-06 5.299379649139066 -0.09008235075566762 EEKESEDKPEIEDVGS(ph)DEEEEK ddPTM_KYSE-520_SHP099_60min_R1 14 EEKESEDKPEIEDVGSDEEEEK 22 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKES(0.001)EDKPEIEDVGS(0.999)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK;EEKESEDKPEIEDVGS(1)DEEEEK 329.29 1.7535e-55 23075780000.0 21371780.0 18938270.0 16359910.0 18049300.0 18516320.0 17935600.0 17413070.0 19025950.0 21867600.0 17059710.0 True False 20186244.759812806 18028447.082277197 17414495.975381523 19764700.045280073 19973449.04055069 17823657.267526966 19173353.050786223 18959953.42014012 17896995.077336133 16908574.241653528 1.19384665266956 1.0662310626915492 1.0299210167869552 1.1689158271305102 1.1812615750503066 1.0541194670109542 1.1339426244203081 1.121321830520347 1.0584567818407582 1.0 24.011251678707183 -7.990673451399223 3.03019141264653 1.0003800519942372 1.116106460447511 0.34558495076888485 0.05220300620993877 0.27596803301588924 6.050102702944437 0.05105769003714846 0.013671118474914699 1.0217074228429718e-08 7.990673451399223 0.11572640845327387 EEKESEDKPEIEDVGS(ph)DEEEEKK ddPTM_KYSE-520_SHP099_60min_R1 16 EEKESEDKPEIEDVGSDEEEEKK 23 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK;EEKESEDKPEIEDVGS(1)DEEEEKK 204.5 5.5288e-16 129890960000.0 29178200.0 28039880.0 24918830.0 27207130.0 26452330.0 26197130.0 27269730.0 30045910.0 34446660.0 24728860.0 True False 27559627.08070038 26692802.076082073 26525137.653337706 29792887.455078054 28533977.87783051 26033623.99433802 30026420.435317658 29941687.750978094 28192014.873633657 24509781.539161947 1.1244338117279977 1.0890673192428124 1.0822266045478866 1.2155509182109483 1.164187360553935 1.0621728289475476 1.2250790725058556 1.221621975827773 1.1502352572416121 1.0 24.546854289429252 -5.230887488039412 24.712123936228828 1.1579001577420014 1.0976250424459746 0.08860378271212466 0.0686444524257955 1225.694106302726 991409.7541287751 0.01819989665194905 0.03151831712514858 5.8764157215154695e-06 5.230887488039412 -0.060275115296026804 EEKIS(ph)PIYGK ddPTM_KYSE-520_SHP099_60min_R1 2 EEKISPIYGK 10 1 Q9BX63;Q9BX63-2;J3QQP5 Q9BX63 BRIP1 Fanconi anemia group J protein 1 EEKIS(1)PIYGK;EEKIS(1)PIYGK 89.23100000000001 0.0024843000000000005 2511130000.0 3080120.0 3046200.0 2592690.0 2724350.0 2683670.0 2745970.0 2608830.0 2626670.0 2947430.0 3095840.0 True False 2909259.6035330086 2899855.9795605782 2759818.945850671 2983271.4048943035 2894859.561006439 2728831.3826641496 2872555.996127198 2617558.6948393867 2412251.010663853 3068413.2661270704 0.9481316078407703 0.9450669541722964 0.8994286970131943 0.9722521531983102 0.9434386146623301 0.8893298085979342 0.936169852945825 0.8530658903529155 0.78615584064026 1.0 21.549061373168882 -7.257150883039379 24.54020996358018 0.8647081466756307 0.9327295905681062 0.15311332152059187 0.05447969164777062 387.52194922544237 2217548.5893857135 0.025320838517008587 0.01395733827066491 5.531578971380186e-08 7.257150883039379 0.06802144389247555 EEKKPEDIK ddPTM_KYSE-520_SHP099_60min_R1 1 EEKKPEDIK 9 2 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 0 47.261 0.057783 790170000.0 1078800.0 892040.0 662000.0 559420.0 945720.0 822090.0 584210.0 901440.0 630470.0 721510.0 False True 1018956.813465516 849185.0594206613 704673.5792374512 612587.1086042441 1020142.7835892681 816959.0313711977 643267.6481401515 898313.115037677 515992.5408553346 715117.9827262858 1.4248793039449068 1.1874754654934894 0.9853948526800895 0.8566238346696899 1.4265377297605055 1.14241153362786 0.8995266007544446 1.2561746966745064 0.7215488259548254 1.0 19.44782175696024 -4.388016667888136 2.937949224303632 1.052382349147102 1.4422060981390048 0.27654316030151516 0.19223605791591483 0.4264197284944407 5.886371596379491 0.04890199001232681 0.3320091807358523 4.0924495292212195e-05 4.388016667888136 0.38982374899190275 EEKREEDEENDNDNES(ph)DHDEADS ddPTM_KYSE-520_SHP099_60min_R1 1 EEKREEDEENDNDNESDHDEADS 23 2 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 EEKREEDEENDNDNES(0.751)DHDEADS(0.249) 50.294 0.049665 213800000.0 138900.0 136490.0 142810.0 118420.0 114690.0 104870.0 78588.0 108430.0 162750.0 108890.0 True False 131194.94010971472 129932.81552433335 152015.7611040789 129674.6011957289 123715.4505031648 104215.46743044861 86532.4419849681 108053.8816377522 133198.70259362957 107925.31931513797 1.2156085424832548 1.2039141171770296 1.4085273230482502 1.2015215893601745 1.1463060872854147 0.9656257502110629 0.8017807362913288 1.0011912155871305 1.2341747371133018 1.0 16.719673835697467 -5.971065140539488 2.457755514796926 0.9897527165429421 1.2672879849683492 0.5363084961962081 0.11258726653327952 0.23353549828300144 2.852698615216532 0.04160847581530404 0.0462285207056025 1.068894541958157e-06 5.971065140539488 0.2775352684254071 EEKS(ph)PDDLKK ddPTM_KYSE-520_SHP099_60min_R1 4 EEKSPDDLKK 10 2 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 EEKS(1)PDDLKK;EEKS(1)PDDLKK;EEKS(1)PDDLKK;EEKS(1)PDDLKK 90.412 0.0022494 4944160000.0 6840890.0 6559500.0 5269010.0 6071010.0 6356170.0 5888980.0 6377220.0 6612460.0 6974770.0 6730510.0 True False 6461412.1947238725 6244371.773989768 5608658.815314081 6647996.965084287 6856364.417339788 5852224.691413784 7021891.63326944 6589522.919619759 5708327.5876434455 6670882.917657537 0.9685992505760812 0.9360637641325089 0.8407670895359599 0.9965692768325056 1.0278046402510361 0.8772788795203106 1.0526180297187946 0.9878037136849723 0.8557079562187713 1.0 22.66944628974863 -5.324267967284365 24.999938612959184 0.9724522035957575 0.9172334633748827 0.13332527436586716 0.06526406022554193 442.25241479247325 175974.19981543857 0.018293942098715703 0.02713430591060921 4.739494599241524e-06 5.324267967284365 -0.05521874022087481 EEKS(ph)VEYEGDLK ddPTM_KYSE-520_SHP099_60min_R1 5 EEKSVEYEGDLK 12 1 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 EEKS(1)VEYEGDLK;EEKS(1)VEYEGDLK;EEKS(1)VEYEGDLK;EEKS(1)VEYEGDLK;EEKS(1)VEYEGDLK 162.4 2.2635e-06 2263590000.0 3158280.0 2914650.0 2753130.0 2571710.0 2668470.0 2785860.0 2511410.0 2609920.0 3652300.0 2641190.0 True False 2983083.912524907 2774625.83902116 2930601.1649637464 2816124.5451871916 2878463.4074826105 2768472.4143777015 2765287.83179962 2600866.796679909 2989134.38699056 2617791.111414729 1.1395423796487578 1.059911093334591 1.1194938939875787 1.0757636592574713 1.0995771950371573 1.0575604761991646 1.0563439610371277 0.9935348872333538 1.141853669666999 1.0 21.31991855027827 -6.3545621727943065 2.5424516076365316 1.0475710604773405 1.0972517653581157 0.2472715763775415 0.04281825429493489 0.439769298619065 5.561344215947281 0.015780730507503053 0.01374576845223941 4.420158341772154e-07 6.3545621727943065 0.04968070488077525 EELDEDDIIS(ph)DPDSHFPAWR ddPTM_KYSE-520_SHP099_60min_R1 1 EELDEDDIISDPDSHFPAWR 20 0 Q8IXW5-2;Q8IXW5 Q8IXW5-2 RPAP2 Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 1 EELDEDDIIS(0.999)DPDS(0.001)HFPAWR 73.389 0.064998 0.0 155850.0 177930.0 119250.0 139440.0 152030.0 149700.0 154220.0 161540.0 239420.0 136930.0 True False 147204.6898207275 169381.97572162512 126937.04580674611 152692.33567583543 163993.896067627 148765.66677160453 169810.06264215635 160979.6554437193 195947.36328704655 135716.9067299278 1.084645188043226 1.248053612500097 0.9353075373236046 1.1250796923900437 1.2083527396772273 1.0961469013410639 1.251207876260198 1.1861429745379 1.4437947932085968 1.0 17.050240927957834 -6.763538310825943 24.958476200217643 1.23579834293877 1.1186159306760655 0.13380025669456674 0.12715184827244747 100.79912534888192 1198571.3144359863 0.049321792168870116 0.03510988805806743 1.723700029954745e-07 6.763538310825943 -0.11718241226270454 EELDFQK ddPTM_KYSE-520_SHP099_60min_R1 2 EELDFQK 7 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;H0YAB0 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ; 113.7 0.021399 818420000.0 943280.0 1131190.0 853050.0 658630.0 1117540.0 1101100.0 878980.0 1032820.0 982870.0 1002560.0 False True 890954.3780179379 1076845.9344491952 908038.967928259 721225.9971756695 1205484.0400671964 1094227.626467694 967835.8764181213 1029237.3884820002 804405.5841364095 993678.0983798767 0.8966227387627616 1.0836969600164459 0.9138160229240774 0.7258145251984305 1.2131534769988939 1.1011892364858966 0.9739933666608036 1.035785522655778 0.8095233108669065 1.0 19.92241904143068 -3.97290883942674 14.916319348915318 0.9857358426555435 0.670678300870044 0.036486351047171905 0.1346378022648014 3837373.0993452943 60170117.75625871 0.03420398861602959 28931915.67110043 0.0001064366410584906 3.97290883942674 -0.3150575417854995 EELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELR ddPTM_KYSE-520_SHP099_60min_R1 5 EELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELR 36 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;;; 240.39 3.7643999999999997e-31 244514900.0 235496.0 200573.0 98333.5 340878.0 97047.1 142308.1 164099.0 307256.0 180756.0 124376.7 False True 222432.56743036254 190937.1720137894 104672.23474916286 373274.9426312918 104684.154647534 141419.90236139073 180687.72837190487 306190.20065008954 147935.26688795176 123274.81920160846 1.8043633636694905 1.548874078667463 0.849096639744227 3.0279901852528646 0.8491933334441111 1.14719212956303 1.4657310352765645 2.4838016606565376 1.200044484721674 1.0 16.9115186113794 EELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELRR ddPTM_KYSE-520_SHP099_60min_R1 11 EELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELRR 37 2 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;;;;;;;;; 333.6 6.244199999999998e-82 2975969000.0 911465.0 839526.0 675790.4 1332926.0 660143.0 634662.2 599955.4 898283.5 861351.1 498704.6 False True 860904.2194895701 799193.9108057831 719352.9304868706 1459606.8862811853 712092.4984001291 630701.037793811 660604.7468324468 895167.5641994448 704951.4531342287 494286.4652303083 1.7417110927535506 1.616863837113982 1.4553360876504975 2.9529574223746846 1.4406473745307513 1.2759828200028531 1.3364815614051742 1.8110298929232254 1.4262001950746577 1.0 18.91498787694433 -5.951110558914408 24.999990147534607 1.41183662835456 1.9229005047736354 0.29792045572069914 0.4194552917374464 163.10658294304042 83404.96471173003 0.1323028266944553 0.15001727079736493 1.11915294297107e-06 5.951110558914408 0.5110638764190754 EELEEVIKDI ddPTM_KYSE-520_SHP099_60min_R1 1 EELEEVIKDI 10 1 P28066;P28066-2 P28066 PSMA5 Proteasome subunit alpha type-5 0 107.79 0.017828999999999998 91129000.0 197880.0 209910.0 272590.0 158400.0 195600.0 222230.0 173720.0 207640.0 283750.0 195640.0 False True 186903.20193599965 199825.6085186662 290161.5875594208 173454.2883753036 210992.60718823795 220842.98013796684 191281.31294381633 206919.74530354058 232228.15275540657 193906.78180561672 0.9638817177800524 1.0305240830564806 1.4963973145111316 0.8945240943103482 1.08811360398807 1.1389131317714947 0.9864601493699571 1.0671093779018457 1.1976278013226243 1.0 17.565003736397415 EELEFEVPFR ddPTM_KYSE-520_SHP099_60min_R1 2 EELEFEVPFR 10 0 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 0 ; 133.13 0.0023588000000000003 66564000.0 99372.0 116402.0 115550.0 76933.0 100297.0 108550.0 97142.0 98041.0 116930.0 106612.0 False True 93859.63706682908 110809.87319703592 122998.53788653683 84244.68918925016 108189.80328813249 107872.4991854219 106962.06137455805 97700.91865394136 95698.45956542628 105667.50062288079 0.8882545391303134 1.048665602421201 1.1640148310643703 0.7972620596933867 1.0238701838349864 1.02086732959087 1.0122512668894994 0.9246070748150697 0.9056565074531927 1.0 16.689172200260906 -7.2635408108457575 24.41895894243765 0.9363488409676188 0.9969322096337336 0.053824864066145506 0.09430616570022457 393.8118936815367 4576066.808145676 0.048532151887795236 0.025128669992062966 5.4507867199678404e-08 7.2635408108457575 0.0605833686661148 EELEHPGVEHFKEEDKLK ddPTM_KYSE-520_SHP099_60min_R1 3 EELEHPGVEHFKEEDKLK 18 2 Q92576-2;Q92576;E7EVH3;D6R9X2;E9PE34;A0A1B0GX99 Q92576-2 PHF3 PHD finger protein 3 0 ;; 178.66 2.8920999999999996e-09 1570720000.0 1973670.0 2085440.0 1545530.0 1446090.0 1815620.0 1924710.0 1608600.0 2019780.0 2079050.0 1772650.0 False True 1864186.590686397 1985252.332090742 1645157.336735432 1583525.958817188 1958498.964535321 1912697.170955075 1771212.9864231115 2012773.8546001958 1701546.9285854737 1756945.7001008329 1.061038249832883 1.1299451838362484 0.9363734671145584 0.9012947632509689 1.1147179815647807 1.0886489951540923 1.008120504988549 1.145609596520075 0.9684687059411229 1.0 20.744638173643832 -4.722023772014059 24.999982990733862 1.026717396378165 1.0954917038815633 0.13359767966307368 0.07512293335643909 362.927954272243 230187.920501329 0.019942291893390283 0.052760255923688056 1.896602103898887e-05 4.722023772014059 0.06877430750339819 EELMS(ph)SDLEETAGSTSIPK ddPTM_KYSE-520_SHP099_60min_R1 2 EELMSSDLEETAGSTSIPK 19 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.5)S(0.5)DLEET(0.001)AGSTSIPK;EELMS(0.55)S(0.45)DLEETAGSTSIPK 119.4 2.1368000000000003e-05 986760000.0 541540.0 549690.0 447080.0 462550.0 427040.0 521250.0 489590.0 585770.0 655800.0 564710.0 True False 511499.6966667735 523282.06729848916 475899.49215329194 506510.61292927124 460645.6184747712 517996.68540213007 539082.5351379407 583738.1005897459 536723.2513726722 559707.108737732 0.9138702880160352 0.9349212456468711 0.8502652275161459 0.9049565478479787 0.8230119133445218 0.9254781247469439 0.9631511315868321 1.042934941287791 0.9589359202228219 1.0 19.09431254569288 -6.764082112073746 2.711876690549116 1.0001889017948233 0.8868372877826614 0.6581260547011488 0.036183411343594214 0.16195749413250998 2.4372271114595345 0.01636036916729946 0.01101549928321319 1.7215430520051807e-07 6.764082112073746 -0.11335161401216198 EELMS(ph)SDLEETAGSTSIPKR ddPTM_KYSE-520_SHP099_60min_R1 1 EELMSSDLEETAGSTSIPKR 20 1 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.532)S(0.468)DLEETAGSTSIPKR 87.65899999999999 0.0012136 1353500000.0 698640.0 858610.0 787320.0 635110.0 542030.0 507760.0 452270.0 505370.0 639620.0 526610.0 True False 659885.0464956877 817361.086800115 838071.9069565402 695470.6634472155 584684.677271169 504590.8814959913 497989.8653298406 503616.98942424526 523481.13150806434 521944.6450963805 1.2642816679800126 1.5659919006337997 1.60567200914914 1.3324605779196992 1.120204379457142 0.9667517163679595 0.9541047503952905 0.9648858248775578 1.0029437727278534 1.0 18.993537284144644 -5.770102986046246 2.206732060226362 0.9763858147852 1.4868017892207406 0.8649022736343934 0.08779787625053422 0.10109610735797478 1.0111148587020686 0.02992842279936076 0.03817552102637738 1.6978409886669672e-06 5.770102986046246 0.5104159744355405 EELMSS(ph)DLEETAGSTSIPK ddPTM_KYSE-520_SHP099_60min_R1 21 EELMSSDLEETAGSTSIPK 19 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.026)S(0.974)DLEETAGSTSIPK;EELMS(0.001)S(0.999)DLEETAGSTSIPK;EELMS(0.177)S(0.82)DLEET(0.001)AGST(0.001)SIPK;EELMS(0.072)S(0.928)DLEETAGSTSIPK;EELMS(0.087)S(0.913)DLEETAGSTSIPK;EELMS(0.141)S(0.859)DLEETAGSTSIPK;EELMS(0.064)S(0.936)DLEETAGSTSIPK;EELMS(0.137)S(0.863)DLEETAGSTSIPK;EELMS(0.022)S(0.978)DLEETAGSTSIPK;EELMS(0.064)S(0.935)DLEET(0.001)AGSTSIPK;EELMS(0.066)S(0.934)DLEETAGSTSIPK;EELMS(0.012)S(0.988)DLEETAGSTSIPK;EELMS(0.052)S(0.948)DLEETAGSTSIPK;EELMS(0.027)S(0.973)DLEETAGSTSIPK;EELMS(0.157)S(0.843)DLEETAGSTSIPK;EELMS(0.158)S(0.842)DLEETAGSTSIPK;EELMS(0.013)S(0.987)DLEETAGSTSIPK;EELMS(0.149)S(0.851)DLEETAGSTSIPK;EELMS(0.317)S(0.683)DLEETAGSTSIPK;EELMS(0.004)S(0.996)DLEETAGSTSIPK;EELMS(0.053)S(0.947)DLEETAGSTSIPK 408.27 3.425899999999999e-107 63157250000.0 21946690.0 21193460.0 17375510.0 17111180.0 17288240.0 19882260.0 19081930.0 21686610.0 22468440.0 21644020.0 True False 20729263.356058113 20175294.36956801 18495563.176398944 18737421.402536154 18648726.131370075 19758167.440390144 21010917.70609026 21611384.211602826 18388737.679279953 21452270.82159274 0.9662969262532857 0.9404736000843607 0.8621727429332223 0.8734469911537776 0.869312451183454 0.9210291816986852 0.9794262752333782 1.0074170884440787 0.857193060455437 1.0 24.354627035929326 -6.587367700223124 5.357304085985439 0.9610845449985739 0.9000796362593325 0.2423593540183141 0.04890880721169009 0.2986510842637862 16.632085980828187 0.0194304006091575 0.014994409025881028 2.586022503481339e-07 6.587367700223124 -0.06100490873924136 EELMSS(ph)DLEETAGSTSIPKR ddPTM_KYSE-520_SHP099_60min_R1 2 EELMSSDLEETAGSTSIPKR 20 1 O00567 O00567 NOP56 Nucleolar protein 56 1 EELMS(0.045)S(0.955)DLEETAGSTSIPKR;EELMS(0.2)S(0.8)DLEETAGSTSIPKR 227.66 1.6529e-19 2446900000.0 1200960.0 1578870.0 1277640.0 1052830.0 1055000.0 958380.0 789030.0 865280.0 1679710.0 955910.0 True False 1134340.3547455927 1503018.7152678145 1359998.7186962778 1152890.6466551174 1138022.4978711226 952398.3949269899 868792.8525907184 862278.5456378704 1374717.0060432917 947441.3810867259 1.197267057772473 1.5863975811821045 1.4354436547159721 1.2168464135825892 1.201153465099654 1.0052320005640647 0.9169885018049384 0.9101128184298086 1.4509784283081195 1.0 19.85367715985077 -5.65721184565484 1.7202449422761554 1.0486448754591895 1.4215768635381016 0.4213983716638241 0.17168842205199555 0.32646800086164574 1.986287792288948 0.059423870429002934 0.08642221436118339 2.2018521537646162e-06 5.65721184565484 0.37293198807891215 EELQANGSAPAADKEEPAAAGSGAAS(ph)PSAAEK ddPTM_KYSE-520_SHP099_60min_R1 3 EELQANGSAPAADKEEPAAAGSGAASPSAAEK 32 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 EELQANGSAPAADKEEPAAAGS(0.031)GAAS(0.843)PS(0.126)AAEK;EELQANGSAPAADKEEPAAAGS(0.268)GAAS(0.704)PS(0.028)AAEK;EELQANGSAPAADKEEPAAAGS(0.1)GAAS(0.9)PSAAEK 322.29 1.0258999999999998e-67 492610000.0 556790.0 572910.0 414939.0 441630.0 410981.0 583420.0 503540.0 649830.0 621020.0 604360.0 True False 525903.7487666527 545386.5436445575 441686.6318658737 483602.3824190985 443322.8665379825 579778.6593713396 554442.7372768207 647575.8914014623 508258.42264022 599005.8405849648 0.8779609698848284 0.91048618676565 0.7373661522808199 0.8073416812544466 0.7400977361173162 0.9679015129554517 0.925604893493817 1.0810844361201317 0.8485032836138549 1.0 19.192210544465706 -6.280810128424862 24.059289671429507 0.9672482604736572 0.8152751263167783 0.5069667361587112 0.07392250720367373 428.8715588034157 532674.449933466 0.02597887176584744 0.022949564188550608 5.238294023664452e-07 6.280810128424862 -0.15197313415687885 EELRHT(ph)PELPLAPRPLK ddPTM_KYSE-520_SHP099_60min_R1 2 EELRHTPELPLAPRPLK 17 2 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9J7T7;A0A384DVL6 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 EELRHT(1)PELPLAPRPLK;EELRHT(1)PELPLAPRPLK 142.99 7.9505e-06 895740000.0 1461490.0 1375120.0 1339010.0 939830.0 981310.0 882050.0 721950.0 760210.0 1092560.0 752520.0 True False 1380418.2362919154 1309057.1711028002 1425324.7270917506 1029151.1606298059 1058533.5141098683 876544.7987701664 794931.7515530075 757573.0089443473 894178.6451962895 745853.2582517004 1.8507906495275652 1.7551135650613963 1.9109988611335547 1.3798306157999003 1.4192248976576152 1.1752242000320683 1.0658018085438794 1.0157132124355375 1.1988667144691003 1.0 19.50853229202611 -5.68988354129818 0.9922135378047713 1.0650858825252134 1.8731753167094471 0.9117674766765183 0.09835282721509933 0.14526505546112195 0.30355977826701197 0.04331415297271982 0.07370500051376806 2.0422855225091753e-06 5.68988354129818 0.8080894341842337 EELRSPK ddPTM_KYSE-520_SHP099_60min_R1 1 EELRSPK 7 1 P50454;E9PKH2;H0YEP8 P50454 SERPINH1 Serpin H1 0 89.29799999999999 0.051488 0.0 340610.0 369910.0 271500.0 186290.0 335910.0 309570.0 203430.0 224100.0 328490.0 247270.0 False True 321715.68431079853 352138.96835377056 289001.3244153589 203994.94558986925 362344.20593354333 307637.8588008387 223994.68968547427 223322.64940533307 268844.49655902584 245079.38017314902 1.312699926381019 1.4368363756468772 1.17921517596127 0.8323627448614668 1.4784769150205395 1.2552580253120111 0.9139679132827152 0.9112257801841804 1.0969690570013957 1.0 17.902889582169347 -2.9629526288647705 0.23966633685721508 0.9537016738173806 2.1017817210144267 0.27952182634450373 0.18339351930134723 27.590169657100077 0.8220910606023609 0.28562593628699895 10.405165557192328 0.0010890488760263773 2.9629526288647705 1.148080047197046 EELSHS(ph)PEPCTK ddPTM_KYSE-520_SHP099_60min_R1 2 EELSHSPEPCTK 12 0 P41229-4;P41229-3;P41229-2;P41229-5;P41229 P41229-4 KDM5C Lysine-specific demethylase 5C 1 EELSHS(1)PEPCTK;EELSHS(1)PEPCTK 203.87 8.0199e-09 677140000.0 760630.0 717650.0 651760.0 642960.0 717850.0 685950.0 655410.0 674770.0 824800.0 649680.0 True False 718436.3376216873 683173.0167853886 693773.492452872 704066.7250870275 774340.7109922119 681668.7316097666 721665.2389851875 672429.3803625013 675037.1115159806 643924.3406433921 1.1157154533152838 1.0609523101779013 1.077414610169375 1.0933997686491286 1.2025336862068474 1.0586161891762957 1.1207298644187278 1.0442676847572305 1.048317432513114 1.0 19.296531659995747 -7.6729074565799795 1.3252742613828383 1.005325563481633 1.103933982050692 0.42073283585007004 0.03997584410877415 0.4219392893702928 1.4205217146280322 0.03785329792646663 0.01217759754775894 2.123696950458887e-08 7.6729074565799795 0.098608418569059 EELSSGDSLS(ph)PDPWKR ddPTM_KYSE-520_SHP099_60min_R1 3 EELSSGDSLSPDPWKR 16 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 EELSSGDSLS(1)PDPWKR;EELSSGDSLS(1)PDPWKR;EELSSGDS(0.001)LS(0.999)PDPWKR 165.9 3.3036e-08 1713280000.0 800010.0 644390.0 545940.0 555080.0 578000.0 624660.0 555690.0 580920.0 822330.0 587470.0 True False 755631.8505196035 613432.5371508907 581132.1659348852 607834.636309113 623485.3116298659 620761.2652341388 611864.5682117738 578904.9241077479 673015.6012523472 582265.4728447433 1.2977445611326623 1.0535272410261185 0.998053625085614 1.043913240019965 1.0707921742014637 1.0661138160937462 1.050834364645425 0.9942284938851398 1.1558569632580666 1.0 19.15131754687172 -4.2622324248736225 6.545541066886015 1.0473027463185076 1.3025429527832622 0.7352966156047867 0.044939461397747245 0.05535184591129342 14.83755064793999 0.010598427729231736 0.0630360390870635 5.467232902810091e-05 4.2622324248736225 0.25524020646475454 EEMAAEAGEAVASPMDDGFVSLDS(ph)PSYVLYR ddPTM_KYSE-520_SHP099_60min_R1 2 EEMAAEAGEAVASPMDDGFVSLDSPSYVLYR 31 0 P49354-2;P49354;E9PN85 P49354-2 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha 1 EEMAAEAGEAVASPMDDGFVS(0.009)LDS(0.709)PS(0.24)Y(0.039)VLY(0.002)R;EEMAAEAGEAVASPMDDGFVS(0.006)LDS(0.712)PS(0.233)Y(0.048)VLY(0.001)R 124.73 4.851499999999999e-10 17429000.0 58811.0 76209.0 51516.0 48855.0 52188.0 73254.0 52312.0 66527.0 82549.0 75508.0 True False 55548.63659317806 72547.8052479589 54836.80378851438 53498.164511208655 56294.89869089868 72796.79461380838 57600.20747592062 66296.23336451856 67560.18249094646 74839.05786433516 0.7422412598228334 0.9693842669621824 0.7327297450472993 0.7148428379227821 0.7522128190462727 0.9727112645614954 0.7696543639062862 0.8858507209523849 0.9027396177730683 1.0 16.19150377640972 -7.898304517891059 0.6204592042244779 1.001220125283196 0.7980691721007367 0.3400173751135561 0.08719318147450894 0.9781653963498771 0.8986893845173313 0.09060085000321685 0.03999785864749166 1.2638498525494681e-08 7.898304517891059 -0.20315095318245935 EEMEMDPKPDLDSDSWCLLGTDS(ph)CRPSL ddPTM_KYSE-520_SHP099_60min_R1 2 EEMEMDPKPDLDSDSWCLLGTDSCRPSL 28 2 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 EEMEMDPKPDLDSDSWCLLGT(0.008)DS(0.496)CRPS(0.496)L;EEMEMDPKPDLDSDSWCLLGT(0.001)DS(0.499)CRPS(0.499)L 107.94 0.00064059 361751000.0 411210.0 407750.0 335540.0 353970.0 395740.0 413260.0 359740.0 370190.0 457430.0 362590.0 True False 388399.3615731881 388161.077954772 357169.44528298173 387611.2023750393 426882.4865474096 410680.69104898616 396106.0299240652 368905.8972929955 374372.24287191377 359377.7346907514 1.0807552168122216 1.080092171789076 0.99385524145042 1.078562094862619 1.1878378801478806 1.1427549661705712 1.1021996959965228 1.0265129463583578 1.0417235313536195 1.0 18.455141503634472 -10.132960051626561 4.595740902750973 0.9999914337944646 1.0827851832830953 0.176982322926716 0.0527254523864858 5.185682104716615e-06 9.782099284661803e-07 0.05714402798174711 0.01385802732896308 7.362748202726463e-11 10.132960051626561 0.08279374948863061 EEMEMDPKPDLDSDSWCLLGTDSCRPS(ph)L ddPTM_KYSE-520_SHP099_60min_R1 5 EEMEMDPKPDLDSDSWCLLGTDSCRPSL 28 2 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 EEMEMDPKPDLDSDSWCLLGT(0.007)DS(0.122)CRPS(0.871)L;EEMEMDPKPDLDSDSWCLLGT(0.032)DS(0.135)CRPS(0.833)L;EEMEMDPKPDLDSDS(0.001)WCLLGT(0.269)DS(0.116)CRPS(0.615)L;EEMEMDPKPDLDSDSWCLLGT(0.001)DS(0.141)CRPS(0.859)L;EEMEMDPKPDLDSDSWCLLGTDS(0.117)CRPS(0.883)L 231.24 1.2222999999999998e-23 1028090000.0 2352190.0 2266180.0 1793640.0 1963320.0 2311710.0 2214300.0 2029720.0 2123310.0 2616700.0 2068740.0 True False 2221709.331725484 2157309.3111944706 1909260.9043254713 2149913.342506318 2493628.4251693333 2200479.7323471215 2234903.90575825 2115944.73319428 2141573.241639019 2050412.5730553635 1.0835425810986263 1.0521342580238953 0.9311593819776675 1.0485271943600531 1.216159351507255 1.0731887627220993 1.0899776635821015 1.0319604751746452 1.0444596710835687 1.0 20.967482799646973 -4.251848001315261 20.810584669647646 1.057927286427202 1.0835427176180987 0.013716470987739204 0.06833796265864567 935.0728986351975 2028350.1789449991 0.018224743426553214 0.19280576980546266 5.5995354529241164e-05 4.251848001315261 0.02561543119089671 EENKGGEDKLK ddPTM_KYSE-520_SHP099_60min_R1 8 EENKGGEDKLK 11 2 P62258;P62258-2;B4DJF2;I3L3T1;K7EIT4 P62258 YWHAE 14-3-3 protein epsilon 0 ;;;;;;; 148.28 0.00069658 16720080000.0 29128050.0 28956230.0 17058190.0 12680620.0 20860280.0 22610660.0 14793680.0 18388550.0 19983970.0 17680760.0 False True 27512259.001171906 27565129.246612646 18157788.221468996 13885782.312232573 22501865.357242644 22469538.483941514 16289169.546803372 18324764.411969837 16355384.802887982 17524122.221823122 1.569965026089031 1.5729820243027788 1.036159642784091 0.7923810469057528 1.2840509254849093 1.2822062183496854 0.9295284146396879 1.045688005368375 0.9333069351981756 1.0 24.062838846082915 -4.760993428801836 24.958672815369518 1.0444220396676873 1.5714737240700072 0.689381081543351 0.14320713737858254 6.343405384635255 354914.0198272201 0.039216698145475196 0.09169655241671709 1.7338302316951982e-05 4.760993428801836 0.5270516844023199 EENLRFEPDS(ph)TEYIKVHHKT(ph)Y(ph)EDIDK ddPTM_KYSE-520_SHP099_60min_R1 5 EENLRFEPDSTEYIKVHHKTYEDIDK 26 3 H7C5L9 H7C5L9 MRPS22 3 EENLRFEPDS(0.445)T(0.445)EY(0.417)IKVHHKT(0.842)Y(0.851)EDIDK;EENLRFEPDS(0.413)T(0.413)EY(0.387)IKVHHKT(0.839)Y(0.949)EDIDK;EENLRFEPDS(0.407)T(0.407)EY(0.377)IKVHHKT(0.852)Y(0.957)EDIDK;EENLRFEPDS(0.413)T(0.413)EY(0.387)IKVHHKT(0.839)Y(0.949)EDIDK;EENLRFEPDS(0.409)T(0.409)EY(0.38)IKVHHKT(0.848)Y(0.953)EDIDK 50.827 0.036641 763840000.0 473931.0 409863.0 535766.0 294488.0 607782.0 501946.0 433420.0 436955.0 511444.0 490599.0 True False 447641.1026719738 390172.566263095 570302.3336159089 322476.05097895395 655610.9855934652 498813.1688265847 477234.32337156864 435439.30509106384 418578.66205404786 486252.6745402466 0.9205936051564546 0.8024070338163268 1.1728518185635308 0.6631861743153517 1.348292811372909 1.025831208636979 0.9814533643908389 0.8955000720618618 0.8608254184921764 1.0 18.891346659826826 -4.700654730682719 24.999998957007747 0.991365226628731 0.8615002010390135 0.08424370213978327 0.17395753441774964 186.83632391888338 76839.69490208854 0.04299137527932433 0.11374444105750213 1.9922565774093682e-05 4.700654730682719 -0.12986502558971758 EENPES(ph)DGEPVVEDGTSVK ddPTM_KYSE-520_SHP099_60min_R1 3 EENPESDGEPVVEDGTSVK 19 0 E7EVX2;Q13439-3;Q13439-4;Q13439;Q13439-5;A0A087WTW2;H0Y6I0 E7EVX2 GOLGA4 Golgin subfamily A member 4 1 EENPES(1)DGEPVVEDGTSVK;EENPES(1)DGEPVVEDGTSVK;EENPES(1)DGEPVVEDGTSVK 246.67 1.1478e-20 320360000.0 1953050.0 2726980.0 1963450.0 1744190.0 2393860.0 2182820.0 2279240.0 2594730.0 3146300.0 2042170.0 True False 1844710.42319135 2595971.787519573 2090017.128631074 1909957.2931901542 2582243.1627997747 2169196.2107040323 2509647.822438776 2585729.4872445343 2575011.2317685867 2024077.962584219 0.9113830876534699 1.2825453542338827 1.0325773845008757 0.943618441827032 1.2757626981437635 1.0716959775277308 1.2398968166397164 1.277485124112133 1.2721897473163384 1.0 20.948833429547822 -5.7714617699704025 24.997247946668633 1.200008443231077 1.0589639560170314 0.23758021870885226 0.1267989301394096 312.89195236569054 780394.5038707262 0.038529361370868404 0.044185830308488 1.6925372283704988e-06 5.7714617699704025 -0.1410444872140455 EENPY(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 1 EENPYAR 7 0 A8MZH8;A8MXQ1;P53801 A8MZH8 PTTG1IP Pituitary tumor-transforming gene 1 protein-interacting protein 1 EENPY(1)AR 76.774 0.046745 547420000.0 850690.0 827660.0 687160.0 763690.0 1109000.0 1021500.0 767590.0 819050.0 918660.0 1085400.0 True False 803500.5298915287 787897.971257012 731455.4330948737 836270.8679882281 1196271.9906531512 1015124.4395938148 845185.4881564832 816208.9067177065 751854.5015340333 1075784.2004284218 0.7468975000483754 0.7323940721040878 0.6799276591007544 0.7773593139360017 1.111999962610295 0.943613448858563 0.7856459388601313 0.7587106283887217 0.698889704119668 1.0 20.036957275289385 -5.533016082285135 24.999422899662324 0.8760867385897685 0.7222781831220746 0.2967319834442309 0.11464156733431294 301.6558196899979 743901.7873300958 0.03705630792592942 0.0478914485819133 2.930784713850285e-06 5.533016082285135 -0.1538085554676939 EENSGLLQELEELRK ddPTM_KYSE-520_SHP099_60min_R1 3 EENSGLLQELEELRK 15 1 J3KP58;P30622-2;P30622-1;P30622;F5H0N7;A0A3B3ITA2;A0A3B3ISJ8 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 0 ;; 188.44 1.2554000000000001e-10 109300000.0 153646.0 145710.0 101573.0 92558.0 148996.0 138410.0 111041.0 119685.0 125092.0 125265.0 False True 145122.95009429252 138709.87288483104 108120.5581025462 101354.68449142252 160721.13752872552 137546.13184941735 122266.107935726 119269.84066968894 102378.44611270234 124155.24955469533 1.1688829156624592 1.1172292221419426 0.8708496699925266 0.8163544018875476 1.2945174537941826 1.1078559492470175 0.9847840375195969 0.9606508069330233 0.8246002201268224 1.0 16.921785737533614 -7.151153974229098 2.6988608884284866 0.9150697976757871 1.0546351389011426 0.16101812767416512 0.13631019146142603 0.5881961040121892 8.233880275133192 0.08458901771496584 0.04217525338175528 7.060671816958523e-08 7.151153974229098 0.13956534122535547 EENTAIRT(ph)PEHLISQK ddPTM_KYSE-520_SHP099_60min_R1 1 EENTAIRTPEHLISQK 16 1 P51587 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 EENT(0.004)AIRT(0.995)PEHLISQK 117.31 0.00027625 0.0 148440.0 161280.0 144410.0 122890.0 99920.0 114370.0 126230.0 168100.0 182670.0 122890.0 True False 140205.7372921964 153531.86671378464 153718.89966416938 134569.42865177427 107783.13553296922 113656.17440660273 138990.56028608076 167516.90033483482 149501.7327359653 121801.29020697328 1.151102234253422 1.2605110048743535 1.262046562913738 1.1048276124424008 0.8849096372445363 0.9331278364413891 1.1411255172248034 1.375329440683086 1.22742322747092 1.0 16.894169889826735 -5.275666845391015 20.022334178792885 1.0972799474670398 1.2281489946179618 0.15862895037402214 0.1363345885737699 120.08814492565851 169001.07108990673 0.0443611934127748 0.06645411534864781 5.30069913521961e-06 5.275666845391015 0.13086904715092196 EENWSFLDWDSR ddPTM_KYSE-520_SHP099_60min_R1 2 EENWSFLDWDSR 12 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 0 ; 124.86 0.00075251 30045000.0 38883.0 38767.0 33738.0 28455.0 37987.0 38880.0 29796.0 30742.0 36413.0 36409.0 False True 36726.08247866119 36904.57512954668 35912.80546270862 31159.354644692292 40976.3607835358 38637.3354981963 32808.070460936884 30635.36317723673 29801.317097031246 36086.44458577338 1.0177251569177856 1.0226714089782023 0.9951882451968344 0.8634642454351534 1.1355056241725239 1.0706883413343684 0.9091521993239269 0.8489437939617451 0.8258313457896053 1.0 15.139169388366458 -6.900639358147738 5.851217284282556 0.8783213336089352 1.0146844279091585 0.37015274808574306 0.07718894090087337 0.2185758097948342 10.791023918013417 0.033660171746955736 0.022511879568771858 1.2570734149049038e-07 6.900639358147738 0.1363630943002233 EEPCLLKR ddPTM_KYSE-520_SHP099_60min_R1 1 EEPCLLKR 8 1 Q60FE5;P21333-2;P21333;H0Y5F3;H7C2E7 Q60FE5 FLNA Filamin-A 0 86.33200000000001 0.012339 341780000.0 418070.0 386570.0 329310.0 231870.0 397510.0 333060.0 209770.0 228950.0 373130.0 291720.0 False True 394878.82369811676 367998.5969466003 350537.8495146295 253906.85508574222 428791.77547748777 330981.24899766594 230975.59875791147 228155.82588733165 305378.9978418496 289135.5877547254 1.365721967207626 1.2727544187980575 1.212364940050174 0.878158434447482 1.4830127927428745 1.1447267753094383 0.798848735818189 0.7890963117306643 1.0561792140955804 1.0 18.14138666580951 -6.631240840549378 5.502669834335186 0.8957131720012215 1.2304055192212817 0.4773581893406055 0.1633050969559997 0.18557251643084033 8.312852007401345 0.06402291846099308 0.04908828993673432 2.337540582333322e-07 6.631240840549378 0.33469234722006025 EEPDSENIPQELLSNLGHPES(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 10 EEPDSENIPQELLSNLGHPESPPR 24 0 A0A0A0MTL5;Q13309-2;Q13309;D6RF40;D6RAG5;D6R9R7 A0A0A0MTL5 SKP2 S-phase kinase-associated protein 2 1 EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR;EEPDSENIPQELLSNLGHPES(1)PPR 260.53 1.1837e-37 5578570000.0 3650482.0 5115970.0 3771813.0 5102680.0 3564975.0 4645991.0 3693833.0 3954272.0 4597862.0 4382069.0 True False 3447982.4864045447 4870191.1219724715 4014950.1010941793 5587637.173023318 3845518.2505669245 4616993.646826145 4067241.687976039 3940555.5533660236 3763006.1634688214 4343247.277858091 0.7938720192106922 1.1213248545162844 0.924412045697335 1.2865114085281621 0.8854016371969902 1.063028041337553 0.9364517900490883 0.9072832609497063 0.8664038500991313 1.0 22.050342662660285 -6.887329810882589 5.908136835022541 0.9165325725719862 1.0197981432187528 0.08946534966166408 0.13082306916881706 0.45732165521409496 21.919880782754706 0.05286206026981592 0.03540777739206268 1.2961945441437767e-07 6.887329810882589 0.10326557064676667 EEPFFPPPEEFVFIHAVPVEER ddPTM_KYSE-520_SHP099_60min_R1 6 EEPFFPPPEEFVFIHAVPVEER 22 0 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 0 ;;;;; 190.83 2.0342e-13 184666000.0 436536.0 364574.0 259456.0 239989.0 419870.0 356846.0 276007.0 257886.0 303075.0 288327.0 False True 412320.47786705906 347059.3178032693 276180.9489042777 262797.48240467586 452911.3802664904 354618.79174869746 303908.48112873547 256991.4536570451 248044.21989901285 285772.64709501143 1.4428269537286191 1.2144595409366865 0.9664359122951863 0.9196033457929339 1.5848660985245029 1.2409122963780246 1.063462455970093 0.8992863952147337 0.8679774723735021 1.0 18.12450830903401 -7.004847128960952 3.2730299881969662 0.9160176059708098 1.2167015140100759 0.3512822062440485 0.1867186635332923 0.3143622675107515 6.980689118677307 0.09938875570570596 0.0581316807444697 9.88901125187757e-08 7.004847128960952 0.30068390803926603 EEPGLPPQPQPPPPPLPQPGDKS(ph)SWGR ddPTM_KYSE-520_SHP099_60min_R1 3 EEPGLPPQPQPPPPPLPQPGDKSSWGR 27 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 EEPGLPPQPQPPPPPLPQPGDKS(0.597)S(0.403)WGR;EEPGLPPQPQPPPPPLPQPGDKS(0.58)S(0.42)WGR;EEPGLPPQPQPPPPPLPQPGDKS(0.5)S(0.5)WGR 185.3 2.0595e-15 2406620000.0 1799460.0 1796390.0 1786790.0 1620390.0 1664860.0 1664840.0 1471360.0 1559720.0 1999320.0 1706910.0 True False 1699640.3666654231 1710088.7279636394 1901969.3423650826 1774391.3784119813 1795875.0102423832 1654449.1160189586 1620099.4278897888 1554309.695361383 1636293.8867557333 1691788.1053558837 1.0046413976340658 1.0108173254970994 1.124236147744392 1.0488260159736265 1.0615247882148953 0.9779292754106044 0.957625498583929 0.9187378079091171 0.9671978905487831 1.0 20.690117453091897 -6.375576044875806 3.5344738343029736 0.955270176108982 1.0520382647210276 0.5883401900690758 0.03583418031121213 0.17465320609169693 4.009586197159153 0.013905537145672924 0.012089950397554124 4.211375391998605e-07 6.375576044875806 0.09676808861204556 EEPGLPPQPQPPPPPLPQPGDKSS(ph)WGR ddPTM_KYSE-520_SHP099_60min_R1 1 EEPGLPPQPQPPPPPLPQPGDKSSWGR 27 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 EEPGLPPQPQPPPPPLPQPGDKS(0.42)S(0.58)WGR 175.42 1.2486e-10 860820000.0 926800.0 866750.0 791120.0 700290.0 789110.0 801380.0 785060.0 755160.0 921510.0 773360.0 True False 875388.5564700045 825110.028981727 842116.8610367554 766845.3510501335 851208.4675782756 796378.2901631831 864421.5262472518 752540.5262156695 754187.013376686 766508.6320649745 1.1420465730590763 1.0764523639595294 1.098639761913825 1.0004392892279006 1.1105008240874206 1.0389684562556585 1.1277388017386052 0.9817769751507234 0.9839250098787615 1.0 19.54794251337528 -1.0000000006082042 0.12852882687226397 0.9634711415431159 1.4835677124623692 0.40448152775450874 0.04563743927983141 92.02231491378741 0.8039959993482813 0.25788385127522756 8.657483755138815 0.09999999985995582 1.0000000006082042 0.5200965709192533 EEPLS(ph)EEEPCTSTAIAS(ph)PEKK ddPTM_KYSE-520_SHP099_60min_R1 8 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 EEPLS(0.999)EEEPCT(0.003)S(0.073)T(0.083)AIAS(0.84)PEKK;EEPLS(0.965)EEEPCT(0.018)S(0.02)T(0.021)AIAS(0.976)PEKK;EEPLS(1)EEEPCTSTAIAS(1)PEKK;EEPLS(1)EEEPCTST(0.003)AIAS(0.997)PEKK;EEPLS(1)EEEPCT(0.01)S(0.006)T(0.005)AIAS(0.979)PEKK;EEPLS(1)EEEPCTSTAIAS(1)PEKK;EEPLS(1)EEEPCTSTAIAS(1)PEKK;EEPLS(1)EEEPCT(0.039)S(0.036)T(0.033)AIAS(0.891)PEKK 194.27 1.8439e-13 25878400000.0 22452900.0 19858100.0 17542780.0 18951000.0 19291770.0 19194300.0 19947400.0 21549700.0 21510400.0 20859300.0 True False 21207392.878253516 18904087.0683842 18673615.668240402 20752097.34217409 20809922.54384375 19074501.25393591 21963877.85986349 21474949.120437767 17604653.593056895 20674502.830289815 1.0257752291476134 0.9143671905226272 0.9032195754125728 1.0037531500767503 1.0065500831950132 0.9226099128241299 1.0623654672694056 1.038716591964438 0.8515152087364664 1.0 24.301349300843903 -5.284730608507285 24.40022454851968 0.986948887571771 0.9444453014270103 0.059548553922240344 0.06395707574396352 1495.358545264751 1566555.3574578296 0.017923222675653234 0.026603684622150837 5.191219487807741e-06 5.284730608507285 -0.042503586144760686 EEPLS(ph)EEEPCTSTAIASPEKK ddPTM_KYSE-520_SHP099_60min_R1 8 EEPLSEEEPCTSTAIASPEKK 21 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 EEPLS(0.995)EEEPCT(0.002)S(0.002)T(0.002)AIASPEKK;EEPLS(0.967)EEEPCT(0.023)S(0.005)T(0.005)AIASPEKK;EEPLS(1)EEEPCTSTAIASPEKK;EEPLS(1)EEEPCTSTAIASPEKK;EEPLS(0.97)EEEPCT(0.01)S(0.01)T(0.01)AIASPEKK;EEPLS(1)EEEPCTSTAIASPEKK;EEPLS(0.999)EEEPCT(0.001)STAIASPEKK;EEPLS(0.999)EEEPCT(0.001)STAIASPEKK 184.29 3.0587e-13 8071350000.0 8049450.0 7458420.0 6085990.0 5820210.0 5976280.0 6772620.0 6221840.0 7607060.0 8681680.0 6987230.0 True False 7602930.962319255 7100106.307883345 6478302.653328295 6373361.008490055 6446579.235618215 6730349.566404177 6850804.306506764 7580672.884361145 7105305.759342928 6925328.57818269 1.0978440772140776 1.0252374638585768 0.935450582624673 0.9202972734851117 0.9308698010268119 0.9718455219016224 0.9892388829158656 1.094630066830768 1.025988251550581 1.0 22.723451092019424 -7.0787866294992305 7.776584544141122 1.0450862870590119 0.9757057436305879 0.19695985264213456 0.053797256238572524 0.47185804911547163 41.825757061528165 0.027492443596850095 0.015858234697607772 8.340908759320956e-08 7.0787866294992305 -0.06938054342842392 EEPPS(ph)PIEATPPQSLLEK ddPTM_KYSE-520_SHP099_60min_R1 2 EEPPSPIEATPPQSLLEK 18 0 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 EEPPS(1)PIEATPPQSLLEK;EEPPS(1)PIEATPPQSLLEK 230.82 2.6889000000000004e-19 141034000.0 283477.0 320797.0 220731.0 199188.0 208587.0 287122.0 247941.0 337950.0 325780.0 315536.0 True False 267751.9657126108 305385.4305938862 234959.67344208702 218118.76763194383 225001.61020231608 285329.9650955022 273005.2959509714 336777.7303281227 266626.5642454851 312740.5965232933 0.8561471350032048 0.9764815760691967 0.7512925282298198 0.6974430887986686 0.7194512407523584 0.912353459280591 0.8729448590491439 1.0768596532463257 0.8525486208363948 1.0 18.25460698056039 -6.707685629828463 2.1345450269979236 0.9679430770981021 0.8042964608334605 0.36156948813906165 0.09448587439939593 0.3711081528517851 3.4604523157833253 0.048155124357059875 0.03245654507088542 1.9602631241059274e-07 6.707685629828463 -0.1636466162646416 EEPS(ph)PVKAEVAEK ddPTM_KYSE-520_SHP099_60min_R1 11 EEPSPVKAEVAEK 13 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK;EEPS(1)PVKAEVAEK 189.52 3.9725e-08 24012180000.0 14860980.0 13162130.0 10849870.0 11599790.0 11939200.0 13528180.0 12677120.0 15178270.0 14761210.0 13717350.0 True False 14036611.814770833 12529801.518040096 11549269.9806058 12702230.55399598 12878747.115244452 13443745.610596426 13958647.006368369 15125620.12400486 12080946.363822496 13595824.950936796 1.0324207516222592 0.9215918536209715 0.8494718064025985 0.9342743525923931 0.9472574971890223 0.9888142616656821 1.0266862847043772 1.1125194814282053 0.8885776631737289 1.0 23.69666035632577 -6.2941223075704515 2.39513200658959 1.0155203887028263 0.9286319087240509 0.2006168360872237 0.06568234200041308 0.42714239721546454 4.823966199879308 0.025622851522005746 0.023161646361317588 5.080163530244657e-07 6.2941223075704515 -0.08688847997877547 EEPS(ph)QNDISPK ddPTM_KYSE-520_SHP099_60min_R1 1 EEPSQNDISPK 11 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 EEPS(0.65)QNDIS(0.35)PK 96.334 0.0034743 3324900000.0 3786700.0 3675900.0 3169400.0 2752400.0 3091300.0 3407500.0 3086500.0 3857100.0 4074000.0 3807400.0 True False 3576644.202400696 3499304.2463616114 3373704.5952193025 3013987.2684607618 3334567.722909006 3386232.528552054 3398513.541337152 3843720.6203539083 3334264.2971824724 3773669.3981123767 0.947789492155769 0.9272948626904082 0.894011700364335 0.7986887431019752 0.8836406614148516 0.897331528364906 0.9005859238854148 1.018563158255615 0.8835602553976513 1.0 21.847536606837064 -7.09256839012336 8.029546442948627 0.9631789336129061 0.8894661966568312 0.3278115097137615 0.04894365654034645 0.38641548396299236 30.171630589997033 0.023676396028961665 0.013648668876770914 8.080376741049484e-08 7.09256839012336 -0.07371273695607483 EEPSQNDIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 EEPSQNDISPK 11 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 EEPS(0.009)QNDIS(0.991)PK;EEPSQNDIS(1)PK;EEPSQNDIS(1)PK;EEPSQNDIS(1)PK;EEPSQNDIS(1)PK;EEPSQNDIS(1)PK 259.27 2.624e-20 13286600000.0 14190122.0 12452083.0 10935865.0 9646521.0 11330904.0 11377456.0 11715482.0 13673753.0 13920289.0 13006621.0 True False 13402967.6453531 11853866.241722366 11640808.355902651 10563323.455507698 12222581.68077524 11306445.076850973 12899797.25264591 13626321.942320943 11392715.41952917 12891392.456938019 1.0396834702010609 0.9195179094359767 0.9029907664968871 0.8194090351987245 0.9481195861194318 0.8770538260020124 1.0006519695786136 1.0570093174835735 0.8837459147710396 1.0 23.619904768269564 -6.774089406041355 24.99544330500695 0.9901025971888862 0.9141073208277772 0.19892138341483423 0.06589179770264628 353.09274514572894 697676.3831220514 0.02747006311236796 0.018661052969236914 1.682327692998274e-07 6.774089406041355 -0.07599527636110892 EEPVS(ph)S(ph)GPEEAVGK ddPTM_KYSE-520_SHP099_60min_R1 8 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 2 EEPVS(1)S(1)GPEEAVGK;EEPVS(1)S(1)GPEEAVGK;EEPVS(1)S(1)GPEEAVGK;EEPVS(1)S(1)GPEEAVGK;EEPVS(1)S(1)GPEEAVGK;EEPVS(1)S(1)GPEEAVGK;EEPVS(1)S(1)GPEEAVGK;EEPVS(1)S(1)GPEEAVGK 229.39 1.4332e-14 11165580000.0 23709370.0 22733990.0 20295410.0 21051340.0 21285260.0 20670000.0 20771680.0 22343720.0 25082640.0 22273200.0 True False 22394163.98264269 21641814.995985325 21603684.60240414 23052053.024283838 22960288.865437213 20540990.862852797 22871484.12646106 22266214.85038344 20528264.857899103 22075876.776287396 1.014417873843959 0.9803377331418921 0.9786104905971184 1.0442191382878614 1.040062376598324 0.9304722558026197 1.0360396716395996 1.0086219938634777 0.9298957892331304 1.0 24.39596740200294 -7.725386560477325 24.99702705025325 0.9649477418056452 1.0036028917659623 0.15712601994191688 0.03625542026128571 277.79127127336966 192605.45239005948 0.02421242118106479 0.009150801514147563 1.8819732212455368e-08 7.725386560477325 0.03865514996031705 EEPVS(ph)SGPEEAVGK ddPTM_KYSE-520_SHP099_60min_R1 1 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EEPVS(0.791)S(0.209)GPEEAVGK 215.61 7.867000000000001e-14 2422500000.0 2585700.0 2573300.0 2241200.0 2117300.0 2110400.0 2287900.0 2215000.0 2538900.0 2646200.0 2591300.0 True False 2442266.0665348396 2449674.80539795 2385671.3380467854 2318527.555410542 2276476.473466556 2273620.3674465846 2438913.8163167965 2530093.148483715 2165716.785273503 2568343.098000891 0.9509111412863082 0.953795778805679 0.92887563966968 0.9027327996852147 0.8863599552717416 0.8852479130285559 0.949605922283188 0.9851071496067062 0.8432349972864691 1.0 21.29240651038293 EEPVSS(ph)GPEEAVGK ddPTM_KYSE-520_SHP099_60min_R1 3 EEPVSSGPEEAVGK 14 0 O00567 O00567 NOP56 Nucleolar protein 56 1 EEPVS(0.091)S(0.909)GPEEAVGK;EEPVS(0.184)S(0.816)GPEEAVGK;EEPVS(0.021)S(0.979)GPEEAVGK 229.23 9.455299999999999e-19 5261800000.0 6334000.0 5937400.0 5498980.0 4920630.0 5441130.0 5651680.0 5330020.0 6087400.0 6636000.0 6062700.0 True False 5982640.39348404 5652158.391780907 5853453.049479084 5388285.1957586445 5869315.975205204 5616405.768735749 5868830.437582325 6066284.230209841 5431069.679946701 6008989.194709221 0.9956151025785868 0.9406171668202541 0.9741160883818725 0.8967040913474945 0.976755954291448 0.9346673103823963 0.9766751524116065 1.0095348874235066 0.9038241714144927 1.0 22.51869089696173 -6.788764496000319 24.862759627171894 0.9733031387822031 0.9519827405803318 0.06288364832605176 0.03654623105571531 596.3399350998982 542596.4211699704 0.014555167063730418 0.009816006495662298 1.6264304778647898e-07 6.788764496000319 -0.02132039820187126 EEQLSSYEDKLFDVCGS(ph)QDFESDLDR ddPTM_KYSE-520_SHP099_60min_R1 1 EEQLSSYEDKLFDVCGSQDFESDLDR 26 1 A0A494C1B7;A0A1W2PQ90;Q92878-3;Q92878;Q92878-2;E7EN38 A0A494C1B7 RAD50 DNA repair protein RAD50 1 EEQLSSYEDKLFDVCGS(1)QDFESDLDR 90.85799999999999 0.0034500999999999998 74207000.0 24498.0 36051.0 40623.0 27489.0 26805.0 35093.0 27400.0 29668.0 45391.0 30778.0 True False 23139.04710444773 34319.05584634577 43241.62357909809 30101.546295130778 28914.401000412694 34873.97156991262 30169.859398230317 29565.08863256326 37149.13861399352 30505.33086492166 0.7585247053017713 1.125018312317653 1.4175103941856275 0.9867634751585272 0.9478474804435447 1.143209091038396 0.9890028576258747 0.9691777730088614 1.2177916960970134 1.0 14.896773757974314 EEQMKEGEET(ph)EGS(ph)EEDDKENDKTEEMPNDSVLENK ddPTM_KYSE-520_SHP099_60min_R1 3 EEQMKEGEETEGSEEDDKENDKTEEMPNDSVLENK 35 3 P49321-4;P49321;P49321-3 P49321-4 NASP Nuclear autoantigenic sperm protein 2 EEQMKEGEET(1)EGS(0.993)EEDDKENDKT(0.008)EEMPNDSVLENK;EEQMKEGEET(1)EGS(1)EEDDKENDKTEEMPNDSVLENK;EEQMKEGEET(1)EGS(1)EEDDKENDKTEEMPNDSVLENK 214.58 1.0621e-22 2890220000.0 601430.0 596970.0 504330.0 533340.0 552920.0 537410.0 522150.0 608380.0 628800.0 557430.0 True False 568067.4789790196 568290.6651297616 536839.9187565307 584028.4732454815 596431.6583155459 534055.8248478818 574934.0176929183 606269.671776959 514625.77075806045 552491.6038739781 1.028192057573049 1.0285960205458382 0.9716707276496142 1.057081173994993 1.0795307188986538 0.9666315670739107 1.0406203708103032 1.0973373487052076 0.9314635139241776 1.0 19.075593014703028 EEQRS(ph)PFNDRFPLK ddPTM_KYSE-520_SHP099_60min_R1 8 EEQRSPFNDRFPLK 14 2 E9PQ01;E9PKN0;O94913 E9PQ01 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK;EEQRS(1)PFNDRFPLK 211.06 6.2315e-14 23713260000.0 9988790.0 9810920.0 9891420.0 9189140.0 9713840.0 8539730.0 8883020.0 9747560.0 12025270.0 9313400.0 True False 9434691.906540805 9339588.67670884 10529036.760031575 10062473.102784317 10478263.94381081 8486430.377418002 9781002.351520723 9713747.989457615 9841784.100387694 9230890.521715563 1.0220781932518648 1.0117754787295512 1.1406306612847523 1.0900869292201512 1.1351303451341792 0.9193512107476276 1.059594665163781 1.0523088716745297 1.0661792681036582 1.0 23.138038403467124 -6.204488994478745 24.999998900833344 1.0252614430722338 1.080088722524433 0.2286070440359238 0.05501505065357203 506.955426824293 222541.9749472527 0.01888644771589931 0.01888643634574058 6.244691748465142e-07 6.204488994478745 0.05482727945219934 EERLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 EERLSPR 7 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 EERLS(1)PR;EERLS(1)PR 106.62 0.0024205 1298450000.0 1244550.0 1251030.0 1165040.0 1047830.0 1134250.0 1187230.0 1101550.0 1103560.0 1487570.0 1212900.0 True False 1175512.3305510823 1190928.640965688 1240140.3425299088 1147415.4481584239 1223509.0220003035 1179820.057189391 1212905.4240919924 1099732.00793284 1217464.786588054 1202154.6496219223 0.9778378604789167 0.9906617599825739 1.0315980085589929 0.9544657573959274 1.0177634153684778 0.9814211986456521 1.0089429213399883 0.9148007773198779 1.012735580210871 1.0 20.19719107093984 EES(ph)DDEAAVEEEEEEKKPK ddPTM_KYSE-520_SHP099_60min_R1 9 EESDDEAAVEEEEEEKKPK 19 2 P14625 P14625 HSP90B1 Endoplasmin 1 EES(1)DDEAAVEEEEEEKKPK;EES(1)DDEAAVEEEEEEKKPK;EES(1)DDEAAVEEEEEEKKPK;EES(1)DDEAAVEEEEEEKKPK;EES(1)DDEAAVEEEEEEKKPK;EES(1)DDEAAVEEEEEEKKPK;EES(1)DDEAAVEEEEEEKKPK;EES(1)DDEAAVEEEEEEKKPK;EES(1)DDEAAVEEEEEEKKPK 327.53 2.4802999999999998e-54 23317260000.0 18205230.0 13967300.0 12192690.0 13075350.0 13631590.0 13845640.0 18946230.0 14999230.0 14913310.0 12375930.0 True False 17195349.600673746 13296289.942655278 12978650.306393748 14318027.332752682 14704318.579862544 13759224.224980632 20861499.825785916 14947201.171976589 12205428.837951465 12266288.888527827 1.4018379769904061 1.08397006327568 1.0580747302089195 1.167266437540352 1.1987585416820656 1.1217104333690597 1.7007181239059883 1.2185593628041902 0.995038430031329 1.0 23.548195498220483 EES(ph)DEEEEDDEESGR ddPTM_KYSE-520_SHP099_60min_R1 2 EESDEEEEDDEESGR 15 0 Q96EV2;A8MTF7;Q96EV2-2;H7BXM6;H7C0H2 Q96EV2 RBM33 RNA-binding protein 33 1 EES(1)DEEEEDDEESGR;EES(1)DEEEEDDEESGR 268.13 2.1354999999999997e-28 80335100.0 125216.3 144155.2 183235.0 126989.3 110595.4 127205.7 116676.3 113551.5 129063.0 131679.5 True False 118270.30222649446 137229.76781063352 195046.62128636581 139058.3248912748 119298.62877825183 126411.76204174153 128471.07905495394 113157.61634961922 105628.4126134663 130512.9220751008 0.906196109519626 1.0514649862154466 1.4944621435579422 1.0654755305475172 0.9140752262799239 0.9685765978712871 0.9843552424719146 0.8670223189432932 0.8093329835392449 1.0 16.993833129436826 -5.613658459043021 4.824146985509601 0.9238917863558941 1.1611149596761468 0.32618710302244713 0.14741446173187042 0.24687949413342458 9.892371132188636 0.046274826445428484 0.06048630213566401 2.434117512575547e-06 5.613658459043021 0.23722317332025267 EES(ph)DGEYDEFGR ddPTM_KYSE-520_SHP099_60min_R1 4 EESDGEYDEFGR 12 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EES(1)DGEYDEFGR;EES(1)DGEYDEFGR;EES(1)DGEYDEFGR;EES(1)DGEYDEFGR 173.59 1.3108000000000002e-06 9466400000.0 28743970.0 25426590.0 22301970.0 24858240.0 26602040.0 26184320.0 26507830.0 30143120.0 30813340.0 25085870.0 True False 27149484.684416384 24205058.450310316 23739590.67061364 27220759.6556976 28695469.203097142 26020893.946299642 29187500.147890225 30038560.55217713 25218414.197089974 24863628.70831154 1.091935734840696 0.973512705416926 0.9547918748753615 1.0948023707657002 1.154114290385324 1.0465445028786666 1.1739034752450788 1.2081326062488895 1.0142692562272633 1.0 24.567533529284518 -5.384286174194224 6.062086131470675 1.1119999076713971 1.0040211085956345 0.2428442684665737 0.07237011105033839 0.2787782303750133 12.63232765451315 0.020112283119265103 0.029997381981311428 4.127754179435293e-06 5.384286174194224 -0.10797879907576258 EES(ph)DGEYDEFGRK ddPTM_KYSE-520_SHP099_60min_R1 9 EESDGEYDEFGRK 13 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EES(1)DGEYDEFGRK;EES(1)DGEYDEFGRK;EES(1)DGEYDEFGRK;EES(1)DGEYDEFGRK;EES(1)DGEYDEFGRK;EES(1)DGEYDEFGRK;EES(1)DGEYDEFGRK;EES(1)DGEYDEFGRK;EES(1)DGEYDEFGRK 210.91 7.245700000000001e-10 6036440000.0 9850710.0 8519210.0 7269160.0 8037650.0 8423530.0 8155570.0 9098890.0 8689010.0 9127590.0 7723190.0 True False 9304271.47939646 8109934.364005083 7737741.684667226 8801545.839392401 9086413.88767044 8104668.062474907 10018694.597808916 8658869.852340186 7470249.743819286 7654768.545150903 1.2154869771066397 1.0594617350177773 1.010839405401602 1.14981214487118 1.1870266010102222 1.0587737584317953 1.3088174434948132 1.1311733073660803 0.9758949208923495 1.0 22.867927325388724 -7.756050279033775 20.34083827460264 0.9879470742251056 1.1379637180633575 0.3571027257945798 0.08165736007280451 13.540243445297497 51129.98966921063 0.061340082607903086 0.021377355739802824 1.753677463773616e-08 7.756050279033775 0.15001664383825186 EES(ph)EEEEDEDDEEEEEEEKEK ddPTM_KYSE-520_SHP099_60min_R1 14 EESEEEEDEDDEEEEEEEKEK 21 1 A0A494C198;B4DFG0;H0Y993;A0A494C028;P35659;H0Y8X0;D6R9L5 A0A494C198 DEK Protein DEK 1 EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK;EES(1)EEEEDEDDEEEEEEEKEK 304.08 3.3158e-45 60238700000.0 28417180.0 25863220.0 23313940.0 24562550.0 25830340.0 23779840.0 25503660.0 28028400.0 32229740.0 25259880.0 True False 26840822.377156086 24620712.08971531 24816793.876022913 26896967.36700003 27863040.80346953 23631421.197876237 28081818.844535436 27931176.022277765 26377631.661628295 25036097.11508926 1.0720849281647464 0.9834085551168598 0.9912405181183702 1.0743274897583466 1.1129147117214397 0.9438939739386766 1.1216532159723298 1.1156361909717805 1.0535840127305822 1.0 24.577506341834834 -5.269629866493033 24.174584315295178 1.065005288413719 1.0123610555558253 0.11128527513296904 0.05659509040710231 728.0382014508042 2148837.0938307736 0.015905259145198556 0.02406376351552625 5.374896842740153e-06 5.269629866493033 -0.05264423285789377 EES(ph)EES(ph)DDDMGFGLFD ddPTM_KYSE-520_SHP099_60min_R1 10 EESEESDDDMGFGLFD 16 0 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 2 EES(1)EES(1)DDDMGFGLFD;EES(1)EES(1)DDDMGFGLFD;EES(1)EES(1)DDDMGFGLFD;EES(1)EES(1)DDDMGFGLFD;EES(1)EES(1)DDDMGFGLFD;EES(1)EES(1)DDDMGFGLFD;EES(1)EES(1)DDDMGFGLFD;EES(1)EES(1)DDDMGFGLFD;EES(1)EES(1)DDDMGFGLFD;EES(1)EES(1)DDDMGFGLFD 216.54 6.9877e-18 572709100.0 752400.4 701710.0 623572.5 584317.0 647334.2 598694.0 567355.5 676829.0 826974.0 647324.0 True False 710663.2499389878 667998.7983118173 663768.981101276 639850.3119986875 698275.7187122318 594957.3286717366 624709.3307960831 674481.2381720766 676816.3679180592 641589.212970451 1.1076608452450993 1.0411627639733754 1.0345700452601696 0.9972896973069221 1.088353271214352 0.9273181603493356 0.9736905143772339 1.0512664872424227 1.0549060898086369 1.0 19.291290360424064 -1.0007713524663615 0.785375814723988 1.0117135763399328 22.875775147210085 0.3022255048557554 0.04282403732389272 612.6137696205889 2.2625943183698882 0.01601051809640443 23795.46168803592 0.09982254716500609 1.0007713524663615 21.864061570870152 EES(ph)EES(ph)DEDMGFGLFD ddPTM_KYSE-520_SHP099_60min_R1 45 EESEESDEDMGFGLFD 16 0 F8VWS0;Q8NHW5;P05388;P05388-2;F8W1K8 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 2 EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD;EES(1)EES(1)DEDMGFGLFD 283.45 3.289999999999999e-37 11106171900.0 10285822.3 9628993.7 8274215.9 8205763.0 9245410.8 9311488.3 8665669.1 9358050.9 11055149.8 9650663.9 True False 9715247.232740596 9166402.389237791 8807585.096127518 8985636.248367399 9972972.030768385 9253371.847598497 9541679.501408352 9325590.005613396 9047813.273967579 9565166.525948895 1.0156903391472123 0.9583108003787163 0.9207978838877326 0.9394124215182961 1.0426344385864244 0.9674031102851639 0.9975445252859083 0.9749532305908566 0.9459127814891866 1.0 23.189358654891834 -4.250258814184619 23.574153240385925 0.9713641623789261 1.0156903976030922 0.13542745171766368 0.0331805243471712 1640.393217500954 3458610.1321767326 0.008648487785558462 0.12119079673262691 5.620063023913334e-05 4.250258814184619 0.04432623522416612 EES(ph)EES(ph)EAEPVQR ddPTM_KYSE-520_SHP099_60min_R1 2 EESEESEAEPVQR 13 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 EES(1)EES(1)EAEPVQR;EES(1)EES(1)EAEPVQR 306.27 4.0871e-45 2403100000.0 1762340.0 1633970.0 1529330.0 1444410.0 1628940.0 1481000.0 1500510.0 1637280.0 1899610.0 1563600.0 True False 1664579.4870623103 1555471.6285610262 1627913.0588145151 1581686.2921222968 1757128.3105992256 1471756.529650945 1652196.1943663734 1631600.6578240264 1554688.70927118 1549747.7204623928 1.0740970708223758 1.0036934450833879 1.0504374598007478 1.0206088844256371 1.1338157090980958 0.9496749117410039 1.0661065491829944 1.0528169432229986 1.0031882536386716 1.0 20.56360195123628 -7.772456473833859 23.351841580024196 1.0015940129755627 1.0426029935872512 0.12121771480597987 0.04546225072921139 231.86491652452207 491422.4831927839 0.03953766187851329 0.010671475925602325 1.6886650935833504e-08 7.772456473833859 0.04100898061168845 EES(ph)EESEAEPVQR ddPTM_KYSE-520_SHP099_60min_R1 3 EESEESEAEPVQR 13 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 EES(1)EESEAEPVQR;EES(0.993)EES(0.007)EAEPVQR;EES(1)EESEAEPVQR 292.76 5.486000000000001e-36 1589350000.0 2907465.0 2743519.0 2513473.0 2287616.0 2548005.0 2487113.0 2581179.0 2461227.0 3222619.0 2342534.0 True False 2746182.1205622186 2611716.2291340227 2675495.4912789897 2505030.3368431726 2748518.4973347 2471590.0052192765 2842109.763199441 2452689.5779917003 2637472.6252140123 2321780.971223877 1.1827912083863052 1.1248762314376763 1.1523462051067892 1.0789262070326555 1.1837974948540808 1.064523327502521 1.224107613260903 1.0563828407547065 1.135969610356366 1.0 21.146800449092925 -13.999999999884084 0.218775233003926 0.32601650572128 1.1493862003498292 0.39145879754174506 0.05138352058218131 149.45946706656437 1.4953059938478799 44.26418752143072 0.09207004006439728 1.0000000002669068e-14 13.999999999884084 0.8233696946285491 EES(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 2 EESPLR 6 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 EES(1)PLR;EES(1)PLR 155.03 0.006790600000000001 3014700000.0 3757500.0 3162400.0 2953500.0 3099500.0 3227300.0 3267700.0 3184800.0 3202000.0 3599000.0 3238700.0 True False 3549063.984609451 3010473.5571408286 3143887.335767086 3394075.5481013455 3481270.1491748546 3247305.0722082285 3506750.664652699 3190893.0093524214 2945512.323406904 3210007.637670471 1.1056247788821576 0.9378399982018591 0.9794018241179735 1.0573418917359505 1.084505254230872 1.0116191108395072 1.0924430906331355 0.994045301296566 0.917602901887326 1.0 21.614145299324775 -7.520987582226112 24.78377084083296 0.9578089745657716 1.0344115841224113 0.27231433354141643 0.05267105684980373 94.3411099371717 1236456.663642054 0.03480115210161458 0.013600756412459131 3.013092176241921e-08 7.520987582226112 0.07660260955663967 EES(ph)PSTLQVLPDSESLPR ddPTM_KYSE-520_SHP099_60min_R1 5 EESPSTLQVLPDSESLPR 18 0 P43363;C9J9A2;C9J958 P43363 MAGEA10 Melanoma-associated antigen 10 1 EES(0.963)PS(0.031)T(0.006)LQVLPDSESLPR;EES(0.998)PS(0.002)TLQVLPDSESLPR;EES(0.988)PS(0.012)TLQVLPDSESLPR;EES(0.864)PS(0.133)T(0.003)LQVLPDSESLPR;EES(0.869)PS(0.118)T(0.012)LQVLPDSESLPR 339.06 4.0001999999999995e-59 1222740000.0 824464.0 877578.0 616993.0 616380.0 605718.0 831141.0 693822.0 895559.0 863708.0 912615.0 True False 778729.3383917619 835417.835608566 656765.3560037038 674960.5698785956 653384.560536019 825953.5407229005 763960.2988101816 892452.5148540414 706880.3995068427 904529.9411037269 0.8609215715308878 0.9235933468262766 0.726084705612182 0.746200362428019 0.7223470786812708 0.9131301278043426 0.8445937100522961 0.9866478424860671 0.7814892215113323 1.0 19.786808733134006 -6.2856479976914486 24.239495008935688 0.9005515329562582 0.7962955284761881 0.30439746587880134 0.08249644243338618 751.2932998247834 752248.4019647324 0.029703195190854747 0.026211185240125976 5.180265302538415e-07 6.2856479976914486 -0.10425600448007011 EES(ph)S(ph)DDEDKES(ph)EEEPPKK ddPTM_KYSE-520_SHP099_60min_R1 3 EESSDDEDKESEEEPPKK 18 2 A0A494C198;B4DFG0;H0Y993;A0A494C028;P35659;P35659-2 A0A494C198 DEK Protein DEK 3 EES(1)S(1)DDEDKES(1)EEEPPKK;EES(1)S(1)DDEDKES(1)EEEPPKK;EES(1)S(1)DDEDKES(1)EEEPPKK 135.3 5.4298e-06 3163890000.0 5734100.0 5150600.0 4560500.0 4679800.0 5255700.0 5058000.0 5079500.0 5438500.0 5802600.0 5374700.0 True False 5416018.04235504 4903157.444791785 4854477.127057994 5124566.784966829 5669293.689157588 5026431.145830166 5592985.431142737 5419635.112855446 4748994.111642369 5327084.339453328 1.0166946301643947 0.920420464995858 0.9112821982383267 0.9619834150199916 1.064239521640346 0.9435613978557703 1.0499149393449805 1.0173736264539064 0.8914809319744534 1.0 22.344914691437403 -5.5354187025333035 24.993895012464687 0.9971265546532587 0.9449064833737357 0.12826552834822613 0.0535003586729441 398.53760876202256 794337.632311757 0.015477946342500711 0.019995179679823474 2.9146156832517744e-06 5.5354187025333035 -0.052220071279522995 EES(ph)S(ph)EDENEVSNILR ddPTM_KYSE-520_SHP099_60min_R1 3 EESSEDENEVSNILR 15 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 2 EES(1)S(1)EDENEVSNILR;EES(1)S(1)EDENEVSNILR;EES(1)S(1)EDENEVSNILR 123.14 0.00010776 963830000.0 1555190.0 1517670.0 1276380.0 1552990.0 1427060.0 1356860.0 1376700.0 1520280.0 1735370.0 1408860.0 True False 1468920.5105055962 1444758.855130887 1358657.4970802066 1700585.7026765295 1539361.503139301 1348391.333438339 1515870.2712972148 1515006.5035160189 1420270.553117709 1396378.5964764927 1.0519500329009266 1.0346469494565964 0.9729864812512392 1.2178543175666314 1.102395515817558 0.9656344897012594 1.0855725482489045 1.0849539711786345 1.0171099418893295 1.0 20.413258718040545 -9.333296196541516 14.034073218680335 0.9999999364292254 1.0606869710957076 0.06256544324325342 0.06857775234829623 0.0 0.0 0.06777032548894173 0.016436718251376214 4.641985755737051e-10 9.333296196541516 0.06068703466648229 EES(ph)WESGR ddPTM_KYSE-520_SHP099_60min_R1 1 EESWESGR 8 0 B8ZZ08;Q9NQ29-3;Q9NQ29 B8ZZ08 LUC7L Putative RNA-binding protein Luc7-like 1 1 EES(1)WESGR 87.806 0.01243 583770000.0 1838500.0 1667600.0 1647100.0 1572400.0 1710500.0 1687100.0 1658600.0 1807100.0 2168300.0 1663100.0 True False 1736514.740041114 1587485.9928813672 1753274.7014531805 1721840.4232407017 1845106.6185863058 1676570.1831020287 1826267.4743760894 1800831.591880312 1774591.3783948817 1648366.227872223 1.0534762910561912 0.9630663174472809 1.0636439110478366 1.044573950937664 1.1193547813510127 1.0171102481674916 1.1079258016184357 1.0924948360564857 1.0765759140100772 1.0 20.652605380071492 -4.891597762200263 8.734963480246519 1.069969026045628 1.0084782621644899 0.23027221101192574 0.04105579213688233 0.30520069783654286 22.56374975269709 0.01007404402064069 0.021076190470564977 1.2835188104410427e-05 4.891597762200263 -0.061490763881138166 EESDDEAAVEEEEEEKKPK ddPTM_KYSE-520_SHP099_60min_R1 2 EESDDEAAVEEEEEEKKPK 19 2 P14625 P14625 HSP90B1 Endoplasmin 0 ; 268.4 1.8832999999999997e-35 1877380000.0 2536560.0 1997350.0 1286450.0 1271940.0 2018630.0 2032610.0 1922340.0 1915020.0 1653180.0 1816320.0 False True 2395851.9602930006 1901394.307916529 1369376.6253927753 1392824.7951772942 2177484.69656643 2019923.727031603 2116668.88743044 1908377.242589027 1353004.1852764173 1800228.8178755753 1.3308596865593518 1.0561959063405828 0.7606680949640376 0.7736932001904886 1.2095599597922497 1.1220372138111234 1.1757776935980235 1.0600748214002462 0.7515734510200089 1.0 20.779748861120176 -7.733526588650681 24.635104445081456 0.875786692665215 1.0521511280323856 0.14663336165909435 0.17778127574008704 342.03150243145535 301869.5401446121 0.1293694323376362 0.048872510600478224 1.847027711552529e-08 7.733526588650681 0.1763644353671706 EESEES(ph)DEDMGFGLFD ddPTM_KYSE-520_SHP099_60min_R1 3 EESEESDEDMGFGLFD 16 0 F8VWS0;Q8NHW5;P05388;P05388-2;F8W1K8 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 1 EES(0.011)EES(0.989)DEDMGFGLFD;EES(0.168)EES(0.832)DEDMGFGLFD;EESEES(1)DEDMGFGLFD 239.19 4.6277e-23 398109000.0 325414.0 324409.0 261967.0 252267.0 286041.0 329518.0 279102.0 308976.0 359859.0 310540.0 True False 307362.6367232739 308823.9046921634 278853.8119820197 276242.37983316055 308550.79934934 327461.3559335046 307316.3539330251 307904.2343715407 294517.67690716416 307788.8571964642 0.9986152179871858 1.003362849146415 0.905990601875574 0.8975061097056959 1.0024755352088315 1.063915565092999 0.9984648461034523 1.0003748581937872 0.9568821938188979 1.0 18.23158147751817 -5.95695706964818 24.645718471213453 1.0068968758452894 0.9516098664350565 0.29218513347864505 0.039761803484649375 163.7136965440809 93739.0226842961 0.01347641172569495 0.015280803308182777 1.1041877643382351e-06 5.95695706964818 -0.0552870094102329 EESGKPGAHVTVK ddPTM_KYSE-520_SHP099_60min_R1 3 EESGKPGAHVTVK 13 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;; 155.98 2.7403e-06 3260660000.0 3730830.0 5766060.0 4189200.0 12604400.0 4530170.0 4407230.0 3551530.0 4049410.0 4238990.0 3426560.0 False True 3523873.4226747802 5489049.822567485 4459242.53495699 13802318.386348944 4886668.605858593 4379722.842791038 3910553.311992592 4035363.5418493943 3469296.272241908 3396203.344223337 1.0375920006876502 1.6162312047374632 1.3130081102304416 4.064043576726805 1.4388621971562496 1.289593819592866 1.1514485193132273 1.1881984477499608 1.0215219527838038 1.0 21.695491410700402 -5.986373990116184 24.999988322973945 1.1677990707213062 2.032797841261567 0.22527009022650213 0.7663608733442517 380.82635757489453 698707.8806672529 0.24703956687298187 0.27998434806089906 1.0318724322268432e-06 5.986373990116184 0.8649987705402609 EESKKEETPGT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 EESKKEETPGTPK 13 2 Q99442 Q99442 SEC62 Translocation protein SEC62 1 EESKKEET(0.049)PGT(0.951)PK;EESKKEET(0.008)PGT(0.992)PK;EES(0.001)KKEET(0.004)PGT(0.996)PK;EESKKEET(0.145)PGT(0.855)PK;EESKKEET(0.001)PGT(0.999)PK;EESKKEET(0.118)PGT(0.882)PK;EESKKEETPGT(1)PK;EESKKEET(0.08)PGT(0.92)PK 136.39 3.3134e-05 15400130000.0 18060790.0 21745760.0 17596990.0 23969220.0 19789870.0 19503140.0 19782880.0 23817040.0 32232100.0 16340080.0 True False 17058921.975407727 20701061.04854878 18731320.131579503 26247247.462191228 21347220.18004241 19381413.66893753 21782726.57270303 23734424.24717891 26379563.145119082 16195319.603589889 1.0533241944559346 1.2782125672876588 1.1565884829730362 1.620668693464574 1.3181104604635612 1.196729310895563 1.3450013402560221 1.465511322290786 1.6288386886339516 1.0 23.94907360322852 -4.396020179990242 1.2762130453003084 1.370922228011469 0.9848571072476511 0.18316102549511193 0.18585368100871896 1.8301954886780571 3.1267268987845647 0.05546233181249311 0.8704027053687351 4.0177214161272746e-05 4.396020179990242 -0.38606512076381794 EESPS(ph)TLQVLPDSESLPR ddPTM_KYSE-520_SHP099_60min_R1 2 EESPSTLQVLPDSESLPR 18 0 P43363;C9J9A2;C9J958 P43363 MAGEA10 Melanoma-associated antigen 10 1 EES(0.365)PS(0.635)TLQVLPDSESLPR;EES(0.154)PS(0.846)TLQVLPDSESLPR 313.51 1.2974999999999997e-47 684260000.0 364750.0 354450.0 296240.0 263980.0 296110.0 367140.0 281730.0 429940.0 393880.0 403300.0 True False 344516.59038890136 337421.6899597036 315336.1044007587 289068.5798315186 319412.1723645669 364848.5430763315 310210.01781983353 428448.6384887501 322361.32090678223 399727.07576265227 0.8618795455163676 0.8441301838658934 0.7888785211737751 0.7231648726321459 0.7990756486914228 0.912744132681593 0.7760545547933518 1.0718529328324808 0.8064535540699579 1.0 18.608655772352865 -7.239207241697012 24.957215799279535 0.9543649592231449 0.8148375240214779 0.416114628362254 0.07826288710187768 735.8670917946365 826066.7484355953 0.03584692088498873 0.020676274871821033 5.764913009142651e-08 7.239207241697012 -0.139527435201667 EESS(ph)LGEESFLPALSMPR ddPTM_KYSE-520_SHP099_60min_R1 2 EESSLGEESFLPALSMPR 18 0 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 1 EES(0.022)S(0.978)LGEESFLPALSMPR;EES(0.149)S(0.85)LGEES(0.002)FLPALSMPR 176.21 9.170799999999999e-09 59738000.0 83004.0 86451.0 74028.0 77598.0 71851.0 69483.0 68804.0 96920.0 104045.0 85637.0 True False 78399.60265562832 82297.76419440338 78799.96332898791 84972.89058931054 77505.26492373267 69049.33082358976 75759.37978232991 96583.80714129796 85153.05076100896 84878.3228045778 0.9236704975442793 0.9695969651036126 0.9283873753068309 1.0011141570852016 0.9131337939155477 0.8135096045967779 0.8925645238862323 1.1379089966665652 1.0032367269681293 1.0 16.37310852843379 -7.245549314537453 24.98099720792231 1.0529296521367693 0.9212181750791997 0.4990737108886044 0.05810442646882567 650.6192682448706 1022850.1573279437 0.028973613131059055 0.01665429948503008 5.6813387577346115e-08 7.245549314537453 -0.13171147705756958 EESYS(ph)PSKDR ddPTM_KYSE-520_SHP099_60min_R1 9 EESYSPSKDR 10 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 EES(0.007)YS(0.987)PS(0.007)KDR;EES(0.093)YS(0.834)PS(0.074)KDR;EES(0.042)YS(0.851)PS(0.108)KDR;EES(0.17)YS(0.799)PS(0.031)KDR;EES(0.001)YS(0.886)PS(0.113)KDR;EES(0.002)YS(0.841)PS(0.157)KDR;EES(0.001)YS(0.905)PS(0.094)KDR;EES(0.001)YS(0.902)PS(0.098)KDR;EES(0.005)YS(0.985)PS(0.01)KDR 186.58 3.8382e-07 23345570000.0 16660060.0 14843590.0 13893530.0 14265740.0 15286940.0 15373470.0 14345590.0 14815280.0 17591430.0 14807790.0 True False 15735893.260793757 14130481.655717159 14789129.174233973 15621551.640448874 16489935.207209457 15277518.471230844 15795782.236666406 14763889.251592359 14397269.755862707 14676604.50088628 1.07217532909901 0.9627895644979639 1.00766694185572 1.0643845883770684 1.1235524678895363 1.040943664476908 1.0762559034490942 1.0059472032990198 0.9809673453415806 1.0 23.80701489694622 -7.44282941531851 5.809325856422259 0.9912447770985754 1.0476667318105262 0.27488163999519644 0.04061666121647861 0.3298801129018879 18.4275001277379 0.025438749216644446 0.011755314057720219 3.60720300991256e-08 7.44282941531851 0.05642195471195077 EETDS(ph)VVLIENLKK ddPTM_KYSE-520_SHP099_60min_R1 1 EETDSVVLIENLKK 14 1 A0A494C1C4;P78552 A0A494C1C4 IL13RA1 Interleukin-13 receptor subunit alpha-1 1 EET(0.006)DS(0.994)VVLIENLKK 132.14 0.0003325 0.0 142790.0 157750.0 147560.0 124260.0 135710.0 119270.0 123790.0 141920.0 213020.0 123690.0 True False 134869.15405519214 150171.45321242264 157071.95370434754 136069.63303986867 146389.6049157251 118525.59168904 136303.90127397573 141427.71264437694 174340.93779720404 122594.20282936386 1.100126685785571 1.2249474261147808 1.2812347572663978 1.10991898392831 1.1940989177072387 0.9668123692113985 1.1118299081702427 1.1536247993816398 1.422097731977305 1.0 16.903531233668847 -3.860231400301708 8.900141199676993 1.1628503374094812 0.00020553728092893755 0.022039591402815417 0.1250990918263084 78723.09583990871 139939.7183347578 0.031376600940486186 1724972.7047736882 0.0001379648965705799 3.860231400301708 -1.1626448001285523 EETKEDAEEKQ ddPTM_KYSE-520_SHP099_60min_R1 3 EETKEDAEEKQ 11 2 P43487-2;P43487;F6WQW2 P43487-2 RANBP1 Ran-specific GTPase-activating protein 0 ;; 122.45 0.0023044 2628190000.0 4606790.0 4403310.0 3725360.0 3152130.0 4557770.0 4252200.0 3381960.0 4038590.0 4825390.0 3860060.0 False True 4351242.175291809 4191768.3780969414 3965502.6663867547 3451707.4874775554 4916440.568836078 4225660.442526496 3723841.5215488663 4024581.0739039895 3949220.814182943 3825862.8714812375 1.1373230880089447 1.0956399951872917 1.0364989022336426 0.9022036605669501 1.2850540476722858 1.1044986672223491 0.9733337672155322 1.0519407540463717 1.032243168886486 1.0 21.867353734127022 -6.744961072273987 24.97614785611405 1.0187078119021291 1.0910478148069296 0.15349233184710265 0.09072814344071879 537.7502254847269 815066.9359225195 0.036217027684681886 0.027973152090995896 1.7990321630734345e-07 6.744961072273987 0.07234000290480047 EETNGPSNQKPVKS(ph)PDNSIK ddPTM_KYSE-520_SHP099_60min_R1 5 EETNGPSNQKPVKSPDNSIK 20 2 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EETNGPSNQKPVKS(1)PDNSIK;EETNGPSNQKPVKS(1)PDNSIK;EETNGPS(0.002)NQKPVKS(0.998)PDNSIK;EET(0.001)NGPS(0.003)NQKPVKS(0.996)PDNSIK;EETNGPSNQKPVKS(1)PDNSIK 212.09 8.386200000000002e-19 13189810000.0 4655410.0 4084240.0 3926440.0 3544460.0 3861790.0 4019490.0 4124500.0 4242670.0 4552890.0 3706280.0 True False 4397165.12697025 3888026.9798307773 4179544.604926128 3881324.412719246 4165690.902420586 3994402.8719558907 4541444.711240914 4227953.16801662 3726199.9450169634 3673445.2426422103 1.1970139301184977 1.0584143012934157 1.1377723986215986 1.0565897015869261 1.134001088151328 1.0873723733752525 1.2362902973270875 1.1509503718573377 1.0143610967062648 1.0 21.80870233890916 -7.770373708134885 23.16192407804153 1.0071801920233059 1.1295217850091899 0.46491815404691095 0.05362563169301409 77.45163913510319 200771.11790244802 0.0488297257563932 0.013462004894388391 1.696782951215785e-08 7.770373708134885 0.12234159298588398 EEVKEVS(ph)IEDTGVDVDPEKLEMESK ddPTM_KYSE-520_SHP099_60min_R1 2 EEVKEVSIEDTGVDVDPEKLEMESK 25 2 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 EEVKEVS(0.997)IEDT(0.003)GVDVDPEKLEMESK;EEVKEVS(1)IEDTGVDVDPEKLEMESK 210.32 2.7718e-21 854690000.0 850330.0 923500.0 865440.0 820800.0 734610.0 700270.0 701680.0 800390.0 979990.0 825190.0 True False 803160.4998091701 879133.6737982389 921227.6471529605 898808.5852174815 792419.6276408565 695899.3551780323 772612.662136871 797613.6339024308 802048.5195375191 817879.4585881054 0.9820035108787982 1.07489394013621 1.1263611495308414 1.0989499440040749 0.9688709250734823 0.8508580914592895 0.9446534621013983 0.9752215018082747 0.980643921443002 1.0 19.64152870475322 -5.841419698307625 5.515343138880275 0.9447800984075384 1.0745856404153038 0.556859469470772 0.05111287774382159 0.15208181398460985 7.794087067630796 0.01687446837008126 0.019375739439640008 1.4407223773193386e-06 5.841419698307625 0.1298055420077654 EEVVGGDDS(ph)DGLR ddPTM_KYSE-520_SHP099_60min_R1 2 EEVVGGDDSDGLR 13 0 P25490 P25490 YY1 Transcriptional repressor protein YY1 1 EEVVGGDDS(1)DGLR;EEVVGGDDS(1)DGLR 166.9 6.5229e-05 278450000.0 1648240.0 1986170.0 1666560.0 2038610.0 1934950.0 1733140.0 1793450.0 1889120.0 2431000.0 1683210.0 True False 1556808.841515021 1890751.4118980495 1773989.1241902807 2232358.8814695566 2087219.5566405007 1722322.8303843595 1974749.4283852645 1882567.083643922 1989591.6805229709 1668298.0689175637 0.9331718776879722 1.1333414856284163 1.0633526209985318 1.338105535851858 1.251107098622217 1.0323831589050803 1.1836910113230152 1.1284356906709014 1.1925876542037066 1.0 20.66994564235832 -3.9971607430696623 1.5896860665302461 1.1614721797122154 0.7037719549815835 0.30248711635483927 0.09675340221896428 2.66682049676287 3.7752440844671837 0.02682608501931844 2.306670331894842 0.00010065590476370564 3.9971607430696623 -0.4577002247306319 EEYEGPNKKPR ddPTM_KYSE-520_SHP099_60min_R1 4 EEYEGPNKKPR 11 2 P23246 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ;;; 95.477 0.0014866 7111770000.0 3056810.0 2627400.0 2155690.0 1976380.0 2896290.0 2579340.0 2059820.0 2308860.0 2445190.0 1967320.0 False True 2887242.6557003404 2501175.760192196 2294649.2266259515 2164214.5609796853 3124211.545364121 2563241.3823024104 2268046.7075059423 2300851.1035519773 2001205.1342237634 1949891.0753518017 1.480719970565238 1.2827258875170402 1.1768089282689538 1.109915619563116 1.6022492665650294 1.3145561896784144 1.1631658486855418 1.179989555640617 1.0263163719864217 1.0 20.894962103843206 -7.37831853571273 1.3233629888732898 1.0075462963991297 1.3169137518225131 0.44258587397335636 0.13559227880583694 0.47672494580292807 1.4633537327440178 0.125355904197157 0.044982819616567596 4.1848651125810615e-08 7.37831853571273 0.3093674554233834 EFAFPPPVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 EFAFPPPVSPR 11 0 Q13191 Q13191 CBLB E3 ubiquitin-protein ligase CBL-B 1 EFAFPPPVS(1)PR 85.45700000000001 0.005979 0.0 50303.0 53315.0 50691.0 49643.0 41862.0 61258.0 67976.0 72118.0 86796.0 71737.0 True False 47512.59231345558 50753.66737255345 53958.62296846771 54361.05579428784 45156.30123780176 60875.66609949863 74847.67746182872 71867.83949046781 71036.03434910395 71101.4659905415 0.6682364653321788 0.7138202660871312 0.7588960679888896 0.7645560472904931 0.635096627175153 0.8561801821019669 1.0526882451591866 1.0107785892913692 0.9990797427236415 1.0 16.11759168560343 -6.546805604264911 3.8423744574211467 1.0148055958052549 0.7152206229224897 0.9299716507917628 0.03968520200723358 0.055351129668564245 1.8015454997318476 0.016024834010629752 0.012631761870659227 2.83918960144311e-07 6.546805604264911 -0.2995849728827652 EFALHK ddPTM_KYSE-520_SHP099_60min_R1 1 EFALHK 6 0 A0A087WW66;Q99460-2;Q99460;C9J9M4;F8WCE3 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 0 74.743 0.057129 283090000.0 432980.0 363120.0 268110.0 241890.0 387840.0 380410.0 296760.0 290970.0 309720.0 282850.0 False True 408961.7362757684 345675.1701457679 285392.7995911672 264879.1528731195 418360.80149226077 378035.720084075 326759.3968984973 289960.69298290834 253482.655405831 280344.1690539703 1.4587845278031708 1.2330385586839883 1.0180086875151841 0.9448356060586601 1.492311407453316 1.3484700657758202 1.1655651622830485 1.0343025644563584 0.9041837975842898 1.0 18.096839537590764 -7.283844634015687 2.7667253876614843 0.9583108973750942 1.2356606062626747 0.35366627645050086 0.16355738468529057 0.3621352093803472 5.453799797830261 0.11387416939897911 0.04999248679780469 5.201820549476099e-08 7.283844634015687 0.2773497088875805 EFDEDS(ph)DEKEEEEDTYEK ddPTM_KYSE-520_SHP099_60min_R1 9 EFDEDSDEKEEEEDTYEK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK;EFDEDS(1)DEKEEEEDTYEK 273.66 2.1771999999999998e-30 31243700000.0 26208150.0 20501310.0 17104090.0 20260500.0 20676030.0 21432460.0 23359850.0 23282030.0 22278810.0 21104940.0 True False 24754331.674848255 19516396.29450634 18206647.008911602 22186051.828458533 22303115.930481732 21298692.06717264 25721291.608166087 23201270.07199664 18233539.707096674 20917966.650994867 1.183400475192503 0.9329968165705118 0.8703832123207677 1.060621818488431 1.0662181608087127 1.0182008807323375 1.2296267623575532 1.10915513248001 0.8716688391043724 1.0 24.318239284195133 -5.455917305264661 24.99658966834208 1.0622026632111963 0.9853618653095799 0.03897496034235848 0.11293424371541122 494.41469950843526 184562.71204889062 0.032343012139142466 0.04797241603447376 3.500118070145351e-06 5.455917305264661 -0.07684079790161635 EFDEDS(ph)DEKEEEEDTYEKVFDDES(ph)DEKEDEEYADEK ddPTM_KYSE-520_SHP099_60min_R1 1 EFDEDSDEKEEEEDTYEKVFDDESDEKEDEEYADEK 36 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 2 EFDEDS(1)DEKEEEEDTYEKVFDDES(1)DEKEDEEYADEK 139.65 1.4684e-06 361060000.0 112800.0 109040.0 101940.0 99572.0 88076.0 88720.0 70219.0 86289.0 140510.0 67676.0 True False 106542.75913877474 103801.5547276231 108511.21550976696 109035.29294258651 95007.08011611068 88166.26557098691 77317.42179139913 85989.68359900394 114996.92596885355 67076.4432911313 1.5883781833265684 1.547511311491191 1.617724646472334 1.6255377833517735 1.41640008704326 1.3144147370533592 1.15267623025 1.2819654617908653 1.7144159756612825 1.0 16.03351857199545 -5.957911122973778 3.073994860178737 1.3035071952846424 1.5930592480865198 0.4103563666546346 0.1700405297286131 0.2733727725141679 5.297726641559966 0.05652572944589825 0.06303858542426762 1.1017647592316272e-06 5.957911122973778 0.28955205280187735 EFDRHS(ph)GSDR ddPTM_KYSE-520_SHP099_60min_R1 6 EFDRHSGSDR 10 1 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 EFDRHS(0.937)GS(0.063)DR;EFDRHS(0.962)GS(0.038)DR;EFDRHS(0.973)GS(0.027)DR;EFDRHS(0.999)GS(0.001)DR;EFDRHS(0.975)GS(0.025)DR;EFDRHS(0.977)GS(0.023)DR 119.87 0.00034439 3985920000.0 2770730.0 3696370.0 3555660.0 4776580.0 3174990.0 2832820.0 2887820.0 2831610.0 3859570.0 3033480.0 True False 2617032.0835866793 3518790.8368355115 3784863.532857146 5230544.727068863 3424843.649778037 2815139.3195987768 3179749.0280072056 2821787.8058127444 3158769.379842057 3006605.727211727 0.8704274258180399 1.170353267469751 1.2588493059138692 1.7396842824215524 1.1391063413406641 0.9363180859132758 1.0575876308717236 0.9385293789184725 1.0506097794110982 1.0 21.51970426108354 -6.00005607318603 24.999999648132867 1.0011486379625436 1.276620971455558 0.2747150228815678 0.2011931259693513 2.782671616212386 1241479.8466446472 0.06650888608843648 0.0746536574775339 9.998708950524908e-07 6.00005607318603 0.2754723334930145 EFDRHSGS(ph)DR ddPTM_KYSE-520_SHP099_60min_R1 1 EFDRHSGSDR 10 1 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 EFDRHS(0.413)GS(0.587)DR 54.523999999999994 0.039734 10022000.0 11152.0 12005.0 12152.0 19746.0 10979.0 10501.0 10156.0 11175.0 13880.0 10851.0 True False 10533.376329039154 11428.261780127626 12935.337363887465 21622.653903148625 11842.98483803511 10435.459363851834 11182.667593008295 11136.2365332646 11359.741886326148 10754.868581950255 0.9794053966142526 1.0626128709101585 1.2027424849799337 2.010499127756672 1.1011742958822412 0.9703009650313644 1.0397772420739764 1.0354600289541789 1.0562418126978366 1.0 13.392702275549194 -5.981530781367742 24.999926564142935 1.0251137956770304 1.321425425788914 0.22185405037394423 0.2603451574165028 399.9082230294436 541312.8978211669 0.0864284330152381 0.09798557147559837 1.0434441742086746e-06 5.981530781367742 0.29631163011188355 EFEDRDR ddPTM_KYSE-520_SHP099_60min_R1 4 EFEDRDR 7 1 Q13951-2;A0A494C0A9;Q13951;J3KS23 Q13951-2 CBFB Core-binding factor subunit beta 0 ;;; 108.46 0.0035898 1233640000.0 1247220.0 1460310.0 1164500.0 709970.0 1113030.0 1252800.0 890420.0 1026050.0 1084330.0 1078930.0 False True 1178034.220328569 1390154.5156300012 1239565.533265878 777445.335339736 1200619.1287255855 1244980.8104974364 980432.3432617612 1022490.8720318696 887443.0057348729 1069371.5195948386 1.101613610183765 1.2999733863837146 1.1591533069213609 0.7270114465310362 1.122733406235163 1.164217288084437 0.916830423568065 0.9561605609426264 0.8298734251601404 1.0 20.02833172861262 -5.024119445792542 24.467794288807035 0.9690994435726439 1.2079860124204236 0.40024374227084436 0.12778729385071194 547.019974716625 554921.3487999811 0.035203751455325234 0.06144389305090598 9.459769496636592e-06 5.024119445792542 0.2388865688477797 EFEENGLEKDLDEEGS(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 4 EFEENGLEKDLDEEGSEK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 EFEENGLEKDLDEEGS(1)EK;EFEENGLEKDLDEEGS(1)EK;EFEENGLEKDLDEEGS(1)EK;EFEENGLEKDLDEEGS(1)EK 151.45 1.8685e-06 2608970000.0 2348020.0 2020080.0 1758194.0 1881780.0 2017380.0 1853410.0 1868400.0 1994820.0 2377690.0 1798340.0 True False 2217770.6499381745 1923032.324598103 1871529.998449866 2060623.805422215 2176136.3286779574 1841842.1807024665 2057276.1058267734 1987900.4350144903 1945961.4326872332 1782408.106687348 1.2442552531136986 1.0788956341609715 1.050000833943778 1.15608978532528 1.2208967859343747 1.033344818053806 1.1542115961592403 1.1152891571555152 1.0917597520939541 1.0 20.765396268745725 -13.99999986663903 0.19317700434108526 0.4435242956759014 1.1470863864396814 0.2928198879271434 0.06354824339918698 191.8922438235483 1.8843231704704937 40.953554440587496 0.16791069745109233 1.0000003070750293e-14 13.99999986663903 0.7035620907637801 EFEENGLEKDLDEEGS(ph)EKELHENVLDK ddPTM_KYSE-520_SHP099_60min_R1 3 EFEENGLEKDLDEEGSEKELHENVLDK 27 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 EFEENGLEKDLDEEGS(1)EKELHENVLDK;EFEENGLEKDLDEEGS(1)EKELHENVLDK;EFEENGLEKDLDEEGS(1)EKELHENVLDK 180.33 4.3461e-11 1205900000.0 1220050.0 1059040.0 976100.0 994640.0 997140.0 1003720.0 979440.0 1035220.0 1284130.0 781360.0 True False 1152371.3943906217 1008162.128748551 1039020.9678152194 1089170.2865505787 1075609.245049488 997455.4111689716 1078451.3536132374 1031629.0634421653 1050964.3622829968 774437.7582888808 1.4880103430607319 1.301798779770351 1.3416455443894353 1.4064013213367836 1.3888904996394356 1.2879736305379117 1.3925603989093638 1.3321006787189047 1.3570675642224639 1.0 19.562789768433806 -12.188113617607785 0.35904418252571074 3.6993932026535464e-17 1.3759656943926144 0.8111347141492911 0.05331778823112646 44.48788873079499 1.2237356704779216 33.579655849523206 0.03846196085842026 6.48464763758317e-13 12.188113617607785 1.3759656943926144 EFEKDKDDDEVFEK ddPTM_KYSE-520_SHP099_60min_R1 5 EFEKDKDDDEVFEK 14 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ;;;; 136.48 4.7333e-06 4915050000.0 4371410.0 4880590.0 3427820.0 2226600.0 3855950.0 4114190.0 2536300.0 3095370.0 4463040.0 3351370.0 False True 4128919.17311021 4646119.130485056 3648782.761905915 2438215.3945482983 4159391.327645637 4088511.8141287034 2792693.9559026156 3084632.883934791 3652664.4400827796 3321679.4691264085 1.2430215532494178 1.3987259076827696 1.0984752730718879 0.7340309073197666 1.2521952723931982 1.2308568156950945 0.840747574189356 0.9286365263732206 1.0996438620982956 1.0 21.663481434131853 -4.8982565125115345 5.474766743077152 1.0139811618899381 1.3163095143026289 0.38059378083834194 0.15492102778311162 0.2113064891425166 9.49758972418872 0.04228395351529226 0.09098761248504093 1.2639895617737337e-05 4.8982565125115345 0.30232835241269074 EFEKDKDDDEVFEKK ddPTM_KYSE-520_SHP099_60min_R1 1 EFEKDKDDDEVFEKK 15 3 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 162.41 2.5583e-08 814670000.0 1144000.0 1321900.0 1106900.0 618820.0 1010500.0 1076700.0 683070.0 790670.0 1329600.0 720710.0 False True 1080540.0394925387 1258393.9397876477 1178252.5451026205 677632.4667449836 1090020.601041485 1069979.9159184133 752121.3817207731 787927.3503137652 1088178.1564884183 714325.070103896 1.512672709828563 1.7616544518094805 1.6494626808089599 0.9486331855137388 1.5259447647314766 1.4978893513604228 1.0529119209149131 1.1030375151178218 1.5233654844707423 1.0 19.44622122978535 -1.0000000000007638 0.16497695322524453 1.0215801809284055 3.646367111386509 0.3207138556701601 0.23322619225931884 73.486954907807 0.7773092509302014 0.6649394491289725 47.25148133586613 0.09999999999982412 1.0000000000007638 2.6247869304581037 EFEPLLNWMK ddPTM_KYSE-520_SHP099_60min_R1 4 EFEPLLNWMK 10 0 P14625 P14625 HSP90B1 Endoplasmin 0 ;;; 180.8 9.0998e-05 1981463000.0 2969644.0 3035179.0 2010144.0 1993351.0 3397410.0 3149931.0 2589628.0 2355330.0 2553542.0 2325663.0 False True 2804911.927481452 2889364.444943439 2139721.0985841155 2182798.4797171666 3664766.8383813496 3130271.112221421 2851412.870573736 2347159.9099681536 2089883.1423554064 2305059.435158433 1.2168501534923166 1.2534880449817318 0.9282715516778189 0.9469597384013384 1.5898795417088498 1.3580001732173423 1.2370235782565626 1.018264377120856 0.9066504362009057 1.0 21.136372519849868 -7.360168021187428 4.0408193625362205 0.9569742917119698 1.217976967839799 0.2824377934200304 0.17944986909076382 0.3515736532482835 10.132104661695031 0.1192526605614145 0.05324230528159413 4.36346984314184e-08 7.360168021187428 0.2610026761278291 EFESVLVDAFSHVAR ddPTM_KYSE-520_SHP099_60min_R1 6 EFESVLVDAFSHVAR 15 0 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 0 ;;;;; 175.15 3.3316e-08 355444600.0 426802.2 336721.8 237282.6 475185.5 373597.2 352363.2 310657.1 335230.0 272179.7 218874.8 False True 403126.6311569076 320545.17929827364 252578.21606158328 520346.98705026926 402997.1741627075 350163.9705663075 342061.3513891236 334067.16537327017 222758.72757187925 216935.7395540178 1.8582767043626187 1.477604289441928 1.1642996980619247 2.39862268946561 1.857679951635446 1.6141368466357078 1.5767865271639532 1.5399360476980612 1.026841994914404 1.0 17.726908226985145 -7.662986473311857 1.74645204457432 0.9618248370792973 1.7147605065115732 0.45041040332157856 0.3006760341524632 0.3495166794548748 1.974695353737727 0.29114859111842106 0.08904463734953097 2.172768851630013e-08 7.662986473311857 0.7529356694322759 EFESWLER ddPTM_KYSE-520_SHP099_60min_R1 1 EFESWLER 8 0 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5;E9PNZ4 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 0 89.75200000000001 0.053982 0.0 25842.0 32401.0 19563.0 21256.0 30467.0 27754.0 25974.0 24421.0 28944.0 28973.0 False True 24408.49274525016 30844.407325107495 20824.06228190672 23276.163849150566 32864.57956648288 27580.776991176426 28599.705401811476 24336.28925090424 23688.499218863377 28716.32176065291 0.849986740944471 1.0741071778688065 0.725164680054527 0.8105551972552263 1.1444564467693736 0.9604564686612334 0.995939021723833 0.8474723696768787 0.8249141173547284 1.0 14.809583347460158 -3.9656929042888613 16.634749335022594 0.9281570302364051 0.5591324158636246 0.03742963981150216 0.12291913869193208 572014643.2978272 7479048503.289747 0.03144452973264183 6200904975.791498 0.00010821989188198534 3.9656929042888613 -0.36902461437278045 EFFNGKEPSR ddPTM_KYSE-520_SHP099_60min_R1 2 EFFNGKEPSR 10 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 119.76 0.00057826 1650870000.0 2801300.0 2755500.0 1935570.0 1637470.0 2854600.0 2679000.0 1894150.0 2191620.0 2402500.0 2320320.0 False True 2645906.3047468932 2623121.6439101784 2060339.9392215004 1793094.6564766911 3079240.7795477784 2662279.3672754103 2085629.167122556 2184017.781747951 1966266.5620964384 2299763.769981644 1.1505122131600551 1.140604821307849 0.8958919894794 0.7796864529659944 1.3389378595056116 1.1576316672284388 0.9068884353888237 0.9496704880107678 0.8549863197958512 1.0 21.133054245546365 -6.7797289976335335 24.949922468828095 0.9236921272677227 1.070223464613295 0.19634609058659291 0.14749620375364508 462.64168101087716 631110.3015266671 0.06669874884791292 0.04506586455753004 1.6606228228156742e-07 6.7797289976335335 0.14653133734557244 EFFVTS(ph)APWSVIDQQAIHPELNGATYR ddPTM_KYSE-520_SHP099_60min_R1 1 EFFVTSAPWSVIDQQAIHPELNGATYR 27 0 P56545;P56545-3;P56545-2 P56545 CTBP2 C-terminal-binding protein 2 1 EFFVT(0.048)S(0.925)APWS(0.027)VIDQQAIHPELNGATYR 134.91 1.8453e-06 63766000.0 34674.0 40389.0 42454.0 36150.0 36544.0 41411.0 38775.0 35508.0 62481.0 48825.0 True False 32750.56409909468 38448.65181487504 45190.65276880169 39585.68513110618 39419.80489308273 41152.5385883695 42694.75540753215 35384.831035629504 51136.02541783454 48392.44848527519 0.6767701392307106 0.7945175955825868 0.9338368729689769 0.8180136854028222 0.8145858729400177 0.8503917424407933 0.882260698598941 0.7312056352427873 1.0566943194327967 1.0 15.56249431583378 -3.6014551252289264 0.03820363780271929 1.5170969881213692 2.0454496653842472e-10 0.39186770553548866 0.08628607012276834 580.3643434558633 2.8796711677338873 40.439788899265 78.9981957850642 0.00025034843149937335 3.6014551252289264 -1.5170969879168241 EFGSVDDENKPIWMHAEER ddPTM_KYSE-520_SHP099_60min_R1 4 EFGSVDDENKPIWMHAEER 19 1 H0YG16;Q07866-4;Q07866-6;Q07866-7;Q07866-9;G3V5R9;G3V3H3;F8W6L3;E7EVH7;G5E9S8;Q07866;G3V2E7;Q07866-8;Q07866-2;Q07866-3;Q07866-5;Q07866-10 H0YG16 KLC1 Kinesin light chain 1 0 ;;; 264.03 3.7625999999999996e-35 2887070000.0 3089230.0 2667490.0 1747850.0 1693130.0 3108460.0 2684290.0 2145440.0 1996010.0 2053300.0 2124570.0 False True 2917864.253672674 2539339.7764158803 1860519.20765888 1854044.5661419018 3353078.117281955 2667536.3504231805 2362322.012676615 1989086.3071822368 1680472.4794807958 2105747.9626904507 1.3856664260734255 1.2059086943963808 0.8835431593065632 0.8804684126456639 1.5923454167790472 1.2667880476137086 1.1218446150879078 0.9445984716237555 0.7980406531338664 1.0 21.00590133962124 -7.236400083372352 3.1792715843220463 0.8932366494751499 1.190835529689393 0.2836843035070691 0.20440304850865787 0.37240556537055886 7.686587645257236 0.12842405543421065 0.06189817358721227 5.802296485940543e-08 7.236400083372352 0.2975988802142432 EFGYDS(ph)PHDLDS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 1 EFGYDSPHDLDSD 13 0 Q96CW6 Q96CW6 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS 2 EFGY(0.006)DS(0.994)PHDLDS(1)D 97.631 0.0024460000000000003 297050000.0 551670.0 599220.0 496460.0 481670.0 599990.0 469850.0 455420.0 603010.0 705770.0 473320.0 True False 521067.76537312014 570432.5717524432 528462.6059640852 527447.7719806341 647205.7995238808 466917.49186799134 501458.2980708782 600918.2990535916 577619.9590138614 469126.7530373883 1.1107185041130925 1.2159455159168486 1.1264814946973787 1.1243182542151837 1.379596868721533 0.9952906945615594 1.068918570139429 1.2809295039409099 1.2312662948212343 1.0 18.83961825063592 -7.2550777264858715 24.943750888613575 1.1920734228385113 1.1502093344093347 0.0 0.11690356389148805 2422.611456465522 9499006.158854088 0.05612148783349541 0.0314030015898984 5.558047749608684e-08 7.2550777264858715 -0.04186408842917655 EFHGNIIK ddPTM_KYSE-520_SHP099_60min_R1 1 EFHGNIIK 8 0 A0A075B7D9;Q92804-2;Q92804 A0A075B7D9 TAF15 TATA-binding protein-associated factor 2N 0 80.23899999999999 0.008840899999999999 0.0 213720.0 187000.0 170720.0 115840.0 221130.0 193910.0 135330.0 166410.0 182900.0 176780.0 False True 201864.5255597423 178016.23930727757 181724.8843616581 126849.39877143416 238531.67294240868 192699.7357627375 149010.4770935224 165832.76255038587 149689.97053379347 175213.86673275882 1.1521035938761162 1.01599401135752 1.0371604014585791 0.7239689479880521 1.361374401412098 1.0997972897695856 0.8504491104051567 0.9464591224581484 0.8543271906789482 1.0 17.41875743131043 -6.757368456136249 24.99780902745494 0.9083471101017428 1.0595315401015115 0.1924081420588647 0.15245373256149586 186.69467439818473 1146421.3407640583 0.060898281509105465 0.04541204829746797 1.7483627454613543e-07 6.757368456136249 0.15118442999976867 EFHLNES(ph)GDPSSK ddPTM_KYSE-520_SHP099_60min_R1 10 EFHLNESGDPSSK 13 0 Q01105;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105-2 Q01105;Q01105-2 SET;SETSIP Protein SET;Protein SETSIP 1 EFHLNES(0.871)GDPS(0.117)S(0.012)K;EFHLNES(1)GDPSSK;EFHLNES(1)GDPSSK;EFHLNES(0.996)GDPS(0.004)SK;EFHLNES(1)GDPSSK;EFHLNES(1)GDPSSK;EFHLNES(1)GDPSSK;EFHLNES(1)GDPSSK;EFHLNES(0.999)GDPS(0.001)SK;EFHLNES(1)GDPSSK 219.53 2.2191e-11 7886700000.0 5411640.0 5383970.0 5247490.0 5986490.0 5236710.0 5208260.0 4816640.0 5042480.0 6270000.0 5104460.0 True False 5111445.541363113 5125315.999696268 5585751.601680863 6555444.209696144 5648809.284195907 5175753.317434051 5303552.977076356 5024988.8138036765 5131526.053837535 5059238.455609788 1.0103191589428713 1.0130607688620037 1.1040696442143907 1.2957373460875978 1.1165335126539433 1.0230301186327893 1.0482907701643647 0.9932302772232182 1.014288237026581 1.0 22.270488808196244 -6.274419454389781 7.330636073912053 1.017166438368912 1.1129647529179372 0.2741916163364424 0.07475725693984403 0.24861410436217798 82.96919556124129 0.02920230638474488 0.026722351200936172 5.315945815551109e-07 6.274419454389781 0.0957983145490251 EFHLNESGDPSSK ddPTM_KYSE-520_SHP099_60min_R1 2 EFHLNESGDPSSK 13 0 Q01105;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105-2 Q01105;Q01105-2 SET;SETSIP Protein SET;Protein SETSIP 0 ; 137.73 2.3041e-05 1237850000.0 2148970.0 2822800.0 1940010.0 2935400.0 2529430.0 2571090.0 1962510.0 2213220.0 2280840.0 2139170.0 False True 2029762.3502345106 2687188.4508908167 2065066.148725748 3214379.5334398076 2728481.750511993 2555042.873612591 2160899.6630518613 2205542.856389432 1866696.9512974166 2120218.618049075 0.9573363486932315 1.2674110245119161 0.973987366748965 1.516060422296229 1.2868869876364981 1.2050846322459055 1.0191871935547 1.0402431322949464 0.8804266387468397 1.0 21.015781599638174 -6.817376444707735 3.433104710960813 0.9790990855287504 1.213583324350233 0.32224820309222146 0.15390687885690965 0.29497255722398963 7.044097436045908 0.0693172391485999 0.04628544109395906 1.5227322833805208e-07 6.817376444707735 0.23448423882148262 EFITGDVEPTDAESEWHS(ph)ENEEEEK ddPTM_KYSE-520_SHP099_60min_R1 9 EFITGDVEPTDAESEWHSENEEEEK 25 0 Q99733;Q99733-2;E9PNJ7;C9J6D1;C9JZI7;E9PS34;A8MXH2;E9PKT8 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFITGDVEPTDAESEWHS(1)ENEEEEK;EFITGDVEPTDAESEWHS(1)ENEEEEK;EFITGDVEPTDAESEWHS(1)ENEEEEK;EFITGDVEPTDAESEWHS(1)ENEEEEK;EFITGDVEPTDAESEWHS(1)ENEEEEK;EFITGDVEPTDAESEWHS(1)ENEEEEK;EFITGDVEPTDAESEWHS(1)ENEEEEK;EFITGDVEPTDAESEWHS(1)ENEEEEK;EFITGDVEPTDAESEWHS(1)ENEEEEK 334.57 7.4126e-73 17411520000.0 4738378.0 6148276.0 5080433.0 12512910.0 5657519.0 5499130.0 5567804.0 5229257.0 6324170.0 5395964.0 True False 4475530.72661764 5852903.592209582 5407925.840160203 13702133.204256423 6102733.558420221 5464807.889871303 6130651.964850528 5211117.92798476 5175860.147352097 5348159.956956472 0.8368356149849662 1.0943770641333528 1.0111750365891716 2.5620275598589286 1.1410903203226481 1.0218108534250372 1.1463105094447017 0.9743758544855304 0.9677833477324737 1.0 22.35061118465387 -5.984972988745793 24.997978978916326 1.0341346308752166 1.3951194890016099 0.12561160535354365 0.439669052685126 540.6430640950413 899374.5190879285 0.14383197908469522 0.16303489221124365 1.035206550084842e-06 5.984972988745793 0.36098485812639325 EFITGDVEPTDAESEWHS(ph)ENEEEEKLAGDMK ddPTM_KYSE-520_SHP099_60min_R1 10 EFITGDVEPTDAESEWHSENEEEEKLAGDMK 31 1 Q99733;Q99733-2;E9PNJ7;C9J6D1;C9JZI7;A8MXH2;E9PKT8 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 1 EFITGDVEPTDAES(0.065)EWHS(0.935)ENEEEEKLAGDMK;EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK;EFITGDVEPT(0.001)DAES(0.021)EWHS(0.979)ENEEEEKLAGDMK;EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK;EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK;EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK;EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK;EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK;EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK;EFITGDVEPTDAESEWHS(1)ENEEEEKLAGDMK 427.9 2.4084999999999992e-141 14547370000.0 4681570.0 6448624.0 5518504.0 10378141.0 5527987.0 4916116.0 4600550.0 4271659.0 7405502.0 4544567.0 True False 4421873.979621575 6138822.423458039 5874235.597758587 11364476.400338119 5963008.126956477 4885432.696503358 5065618.491041188 4256841.611941702 6060849.514313549 4504305.671999624 0.9816993564867337 1.3628787365873405 1.3041378684122036 2.5230251292632673 1.3238462398377333 1.084613934367944 1.1246169465209446 0.9450605535951417 1.3455679866466341 1.0 22.102873304494167 -5.997971972643379 24.99950277104892 1.1098730301090882 1.5643193572521945 0.228997153324474 0.38242362715438155 103.06268848482097 1270420.642078219 0.12436003272098177 0.14010818345484463 1.004680625625761e-06 5.997971972643379 0.4544463271431063 EFKDEDWNMGDIVYTLTNR ddPTM_KYSE-520_SHP099_60min_R1 1 EFKDEDWNMGDIVYTLTNR 19 1 E9PGM4;Q04446 E9PGM4 GBE1 1,4-alpha-glucan-branching enzyme 0 58.835 0.033781 108810000.0 188980.0 259320.0 272820.0 282690.0 259870.0 242630.0 255490.0 277780.0 340140.0 286190.0 False True 178496.90267770996 246861.87795274443 290406.4137274336 309556.7726061522 280320.2905419604 241115.65617097108 281317.4225421121 276816.4460143395 278379.15023162647 283654.5792524509 0.6292755898675225 0.8702904730229608 1.0238030159526301 1.0913159710728608 0.988245249841276 0.8500326587584527 0.9917605535701268 0.975892745126369 0.9814019254167254 1.0 18.113775629161225 -4.348669774460249 2.6766226335445773 0.9852612894866504 0.5930641172504141 0.7862356788767759 0.05682000591553012 0.1788447608256436 1.9083354523868434 0.01623594587556198 0.14150870018060277 4.4805386247743874e-05 4.348669774460249 -0.3921971722362363 EFKPTDISLQQSEAVILSET(ph)ISPLRPQRPK ddPTM_KYSE-520_SHP099_60min_R1 1 EFKPTDISLQQSEAVILSETISPLRPQRPK 30 3 A0A096LNH6;Q14185 A0A096LNH6 DOCK1 Dedicator of cytokinesis protein 1 1 EFKPTDISLQQSEAVILS(0.074)ET(0.463)IS(0.463)PLRPQRPK 140.88 1.3006e-06 140080000.0 84728.0 104660.0 93974.0 78626.0 74888.0 54755.0 85771.0 84364.0 90006.0 50183.0 True False 80027.96893891945 99631.97650213726 100031.71440371634 86098.59140023113 80781.25954556646 54413.253734663995 94441.56972429254 84071.36097470566 73663.17926661884 49738.417661783235 1.6089769779791236 2.003119141819624 2.0111559455695396 1.7310279548033436 1.6241220236411973 1.0939884357534095 1.8987650625817394 1.6902701156756403 1.481011715481619 1.0 15.602072991088788 -11.078411855796666 0.13487602137852917 5.844963107692148e-12 2.0547779157343307 0.4666604176732251 0.23944201394154666 50.76904124363 0.9568510043078312 18.45798999658567 2.1688219614863495 8.348109639242156e-12 11.078411855796666 2.0547779157284856 EFLEDYDDDRDDPK ddPTM_KYSE-520_SHP099_60min_R1 2 EFLEDYDDDRDDPK 14 1 P49756 P49756 RBM25 RNA-binding protein 25 0 ; 113.72 0.00016294 492090000.0 627370.0 640440.0 515990.0 398080.0 597490.0 709950.0 480900.0 521280.0 632580.0 603850.0 False True 592568.5354689115 609672.3010799619 549251.5410131899 435913.4035128833 644509.0637469352 705518.9387074183 529514.065131714 519471.80134766706 517719.41804410587 598500.3587881917 0.9900888558675377 1.0186665590550197 0.9177129686693625 0.7283427605548894 1.076873312243119 1.1788112209922672 0.8847347497064879 0.8679557058235737 0.8650277488427136 1.0 19.190992586470735 EFLHAQEEVKR ddPTM_KYSE-520_SHP099_60min_R1 5 EFLHAQEEVKR 11 1 P43686 P43686 PSMC4 26S protease regulatory subunit 6B 0 ;;;; 156.69 6.1554e-05 3646860000.0 6105450.0 5538040.0 4025200.0 3514090.0 6104140.0 4751880.0 3978990.0 4492780.0 4813180.0 4205500.0 False True 5766768.517587176 5271984.245632492 4284670.832547715 3848068.0570503147 6584501.090194338 4722221.754299617 4381225.1404001685 4477195.594802734 3939227.8423938956 4168242.541829487 1.3835011901817207 1.2647978597038552 1.0279322255242678 0.9231871750345305 1.5796828097494369 1.1329047450839995 1.0510964984482887 1.0741206995209172 0.9450572520343132 1.0 21.99100779696795 -6.659219868735356 4.119469106839909 1.0230294060973528 1.22035975172293 0.2581540961208607 0.17174789197481183 0.36896890480774225 11.430370535034706 0.07238466754735623 0.05431954030455709 2.1916950726978972e-07 6.659219868735356 0.19733034562557727 EFLVAGGEDFK ddPTM_KYSE-520_SHP099_60min_R1 1 EFLVAGGEDFK 11 0 Q9Y3F4-2;Q9Y3F4;H0YH33 Q9Y3F4-2 STRAP Serine-threonine kinase receptor-associated protein 0 132.78 0.00098007 176290000.0 316750.0 404690.0 280620.0 221820.0 335940.0 352040.0 258840.0 311690.0 334520.0 376690.0 False True 299179.24607452983 385248.0849479256 298709.2142078755 242901.70610738514 362376.56676286686 349842.78777739237 285006.07323496137 310608.82013899257 273779.60056295514 373352.8196603858 0.8013311546613556 1.0318606547510747 0.8000722064442727 0.6505956117549525 0.9706008570994501 0.9370299870659101 0.7633692802808143 0.8319444873123839 0.7332999408227162 1.0 18.510180101137006 -10.150272601565383 4.868488029396761 1.000011704837361 0.8395819301551746 0.1683025460901727 0.10933239198575465 151690578.7345508 3.502445803499214 19903.71640033468 0.02700514778682539 7.075015545312204e-11 10.150272601565383 -0.16042977468218633 EFNAEVHR ddPTM_KYSE-520_SHP099_60min_R1 8 EFNAEVHR 8 0 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 0 ;;;;;;; 200.86 3.8998e-06 3626640000.0 3902630.0 3466280.0 2580320.0 2503800.0 3982890.0 3676360.0 2859450.0 3279480.0 3053180.0 3159090.0 False True 3686143.3341999673 3299754.705807646 2746651.5558579722 2741760.399205081 4296320.783455837 3653414.473563496 3148511.111542691 3268104.2493163846 2498799.4764044136 3131102.920334829 1.1772667420992295 1.053863379698417 0.8772153537400346 0.8756532343280135 1.372142945399062 1.166813920371807 1.0055597633328515 1.0437549746741972 0.798057278850866 1.0 21.578239500418547 -7.6247816442524226 7.051709769697432 0.9005584801300096 1.0708022132987647 0.18546823626935982 0.14557981688654206 0.40360154389268127 24.20483893938624 0.10724410528832125 0.03970905533574961 2.3725662910913533e-08 7.6247816442524226 0.17024373316875507 EFNAEVHRK ddPTM_KYSE-520_SHP099_60min_R1 8 EFNAEVHRK 9 1 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 0 ;;;;;;; 165.98 0.00022095 16382820000.0 23895170.0 23474120.0 18253530.0 12560120.0 22293450.0 19838410.0 12946770.0 14846900.0 21313050.0 14013650.0 False True 22569657.286259558 22346388.039827526 19430181.750480633 13753830.028462237 24047817.68262082 19714591.124505453 14255555.859898785 14795399.56919252 17443137.378268257 13889499.963454727 1.6249438313577576 1.6088691528582086 1.3989115376078503 0.9902321944382838 1.7313666975696813 1.41938811162226 1.0263548649992587 1.0652219020210478 1.2558506371117506 1.0 23.72749132593332 -1.00000000000001 0.14933844627753168 0.9195730103889134 3.5659532247201957 0.427390813791124 0.20410729087686988 71.14466688314913 0.698719978202954 0.7791299539339117 40.75366305744011 0.0999999999999977 1.00000000000001 2.6463802143312822 EFNHNSR ddPTM_KYSE-520_SHP099_60min_R1 1 EFNHNSR 7 0 Q9BXR6 Q9BXR6 CFHR5 Complement factor H-related protein 5 0 50.966 0.06671 0.0 287560.0 328130.0 234530.0 238660.0 375090.0 301000.0 274730.0 286850.0 325940.0 216810.0 False True 271608.47356335196 312366.14226682857 249648.17906126793 261342.17464425458 404607.4490298375 299121.34734971944 302502.3895064171 285854.98430129315 266757.512278757 214889.23207562737 1.2639464106222085 1.4536146797569434 1.1617528558778953 1.2161715695101871 1.882865163236478 1.39197922790495 1.4077131114692403 1.3302434074532425 1.2413721697552313 1.0 17.713233666740408 -8.071948637665718 1.4961807181915145 1.0017641070498602 1.4008456078972875 0.2974706223888536 0.18609582081266615 0.651893561468786 3.204372783805029 0.18521560378658883 0.05454422332233228 8.473276183862922e-09 8.071948637665718 0.39908150084742733 EFNKGPWK ddPTM_KYSE-520_SHP099_60min_R1 2 EFNKGPWK 8 1 Q16531;F5H2L3;F5GY55 Q16531 DDB1 DNA damage-binding protein 1 0 ; 68.22399999999999 0.027552999999999998 653180000.0 845980.0 787010.0 496460.0 529800.0 821420.0 775400.0 613010.0 796600.0 757220.0 675710.0 False True 799051.8029806804 749200.8582739063 528462.6059640852 580152.0327098217 886061.080759522 770560.4409799739 674979.0332010651 793836.7805278377 619727.9359628158 669723.7350944256 1.193106591732217 1.1186715044051336 0.7890755221473168 0.8662557444347183 1.3230247553263057 1.15056462926662 1.0078469641006504 1.1853197653446061 0.9253486228548241 1.0 19.353206572688816 -4.528961868625197 24.999442837517496 1.0394355735484528 1.1744979350132116 0.10754391593172463 0.14921166715225143 332.1479807102328 1365013.6063783038 0.040532497246315434 0.10789839186395027 2.958272193622775e-05 4.528961868625197 0.1350623614647588 EFPGFLENQKDPLAVDK ddPTM_KYSE-520_SHP099_60min_R1 4 EFPGFLENQKDPLAVDK 17 1 P60903 P60903 S100A10 Protein S100-A10 0 ;;; 226.22 1.994e-18 5485598000.0 2185719.0 2640691.0 1661809.0 1523833.0 2968800.0 2735597.0 2097041.0 2208687.0 2308239.0 2278017.0 False True 2064472.8099471969 2513828.240602002 1768931.8671284127 1668657.6301629038 3202427.669838661 2718523.1244048174 2309030.369427897 2201025.5803084224 1889120.9835699962 2257835.5416504066 0.9143592488752004 1.1133796922890464 0.7834635581276125 0.7390518925675019 1.418361794188866 1.204039476860065 1.0226742943997014 0.9748387514085911 0.8366955647217371 1.0 21.10650897488319 -4.015808341655641 13.535748661356816 1.0131715367957077 0.8540839860778244 0.021612748766926093 0.1927266705360176 479780.0896191791 16015933.858259981 0.051361753434551405 937389.5539878013 9.642544645385195e-05 4.015808341655641 -0.15908755071788327 EFRPEDQPWLLR ddPTM_KYSE-520_SHP099_60min_R1 4 EFRPEDQPWLLR 12 1 P35269;M0QXD6;M0R0R9;M0R0Z3 P35269 GTF2F1 General transcription factor IIF subunit 1 0 ;;; 199.96 4.0996e-08 1384250000.0 793950.0 671350.0 471820.0 412081.0 747670.0 722200.0 517661.0 539672.0 455553.0 591856.0 False True 749908.0107999134 639097.338283105 502234.2721386914 451245.05434332986 806507.3753396225 717692.4819135118 569991.2257645 537800.0037923914 372836.0587565949 586612.6162969997 1.2783700690478124 1.0894708373601234 0.8561600248372635 0.7692385772263483 1.3748551479010314 1.2234521760611892 0.971665473822533 0.9167890168937405 0.6355745655627519 1.0 19.162048573955452 -7.230507387039915 2.7272821831140606 0.8177214132516037 1.0834973308802078 0.24614077319648697 0.19201496325312098 0.4322603935638242 6.311345867351932 0.12513375355840617 0.05797903214663967 5.881561099412998e-08 7.230507387039915 0.2657759176286041 EFS(ph)GGSYSAK ddPTM_KYSE-520_SHP099_60min_R1 1 EFSGGSYSAK 10 0 H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6 H0Y7V8 CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha 1 EFS(0.999)GGS(0.001)YSAK 76.52199999999999 0.015421 547980000.0 401630.0 432230.0 351570.0 338100.0 393450.0 339970.0 360190.0 379860.0 471690.0 338950.0 True False 379350.78327044466 411465.0220095431 374232.76473188895 370232.9223465281 424412.27657572785 337848.121124532 396601.52031564136 378542.3543199903 386042.9863372605 335947.16669910966 1.1291977455794688 1.2247908683155255 1.113963152030598 1.1020569870682266 1.263330424083772 1.005658492209059 1.1805472991854598 1.1267913286467184 1.1491181489350648 1.0 18.357874837397716 -13.999999999999547 0.24304457986622163 0.1646623164954956 1.1580476823732535 0.2980598007372314 0.06654755592422816 214.86688416661627 2.1419650242913417 88.85683393327223 0.09788622915580707 1.000000000001043e-14 13.999999999999547 0.9933853658777579 EFS(ph)IPR ddPTM_KYSE-520_SHP099_60min_R1 8 EFSIPR 6 0 Q8NFJ5 Q8NFJ5 GPRC5A Retinoic acid-induced protein 3 1 EFS(1)IPR;EFS(1)IPR;EFS(1)IPR;EFS(1)IPR;EFS(1)IPR;EFS(1)IPR;EFS(1)IPR;EFS(1)IPR 95.531 0.013653 16378510000.0 4643260.0 4618460.0 4366830.0 5069870.0 6819040.0 6716260.0 6734190.0 7308960.0 8557390.0 6546540.0 True False 4385689.111690674 4396582.249150208 4648322.8489750335 5551708.920488004 7355659.652969757 6674341.330069853 7414947.644560912 7283606.923684093 7003583.690247015 6488542.748731046 0.6759128022310366 0.6775916287228039 0.7163893387130875 0.8556172218444184 1.1336381584922581 1.0286348704992572 1.1427754939290553 1.1225335496338584 1.079376982083796 1.0 22.6294630713937 -5.5325160985300865 2.4506031203754963 1.0923088565206915 0.6855602889845289 0.9355829898978979 0.04669124540448537 0.061928337213357505 0.7474812457800124 0.014160354257209766 0.021013622773219637 2.934160737779177e-06 5.5325160985300865 -0.4067485675361626 EFS(ph)ITDVVPYPISLR ddPTM_KYSE-520_SHP099_60min_R1 2 EFSITDVVPYPISLR 15 0 P34932;A0A087WYC1;A0A087WTS8 P34932 HSPA4 Heat shock 70 kDa protein 4 1 EFS(0.999)IT(0.001)DVVPYPISLR;EFS(0.997)IT(0.003)DVVPYPISLR 119.54 0.00013105 65322000.0 127561.0 130005.0 117069.0 119426.0 112546.0 127094.0 102137.0 128642.0 153129.0 131573.0 True False 120484.93704345092 123759.36465851666 124615.4550570228 130776.2111332637 121402.72990085608 126300.75920287438 112462.00472106018 128195.7709272686 125324.6336679565 130407.36558224504 0.9239120543959132 0.9490212773331761 0.95558601694496 1.0028284104151006 0.9309499456477408 0.9685093985218135 0.8623899748218814 0.9830408762181333 0.9610241960521549 1.0 16.99266583165058 -7.958511316664912 1.9031599475199965 0.997509972026433 0.9459398553281333 0.17423671974985544 0.035728790230383445 0.5951430760772853 4.872675984338591 0.033944691033309354 0.009630960197955401 1.1002431752433204e-08 7.958511316664912 -0.051570116698299695 EFS(ph)LKR ddPTM_KYSE-520_SHP099_60min_R1 8 EFSLKR 6 1 P11274;P11274-2 P11274 BCR Breakpoint cluster region protein 1 EFS(1)LKR;EFS(1)LKR;EFS(1)LKR;EFS(1)LKR;EFS(1)LKR;EFS(1)LKR;EFS(1)LKR;EFS(1)LKR 125.81 0.005005300000000001 14594980000.0 32946510.0 24074920.0 22754300.0 21527750.0 19148910.0 24840200.0 19940600.0 19116970.0 22178080.0 19185670.0 True False 31118901.413060617 22918324.706008356 24221078.586167235 23573740.88744595 20655820.274605982 24685163.09779565 21956390.44950187 19050657.693004344 18151099.735900007 19015699.890025385 1.6364846728246865 1.2052317210806465 1.2737411047842795 1.2396988290613205 1.0862508555596693 1.2981464390245328 1.154645402298288 1.001838365307674 0.9545322991461965 1.0 24.180687703852488 -1.0000000000000002 0.27347930798878844 1.0041938595240139 4.75858883473441 0.7104744603597009 0.10201867066093348 31.034534575232005 0.4349797575362489 0.12138474546578253 55.24268550986668 0.09999999999999995 1.0000000000000002 3.7543949752103964 EFSGPST(ph)PTGTLEFEGGEVSLEGGK ddPTM_KYSE-520_SHP099_60min_R1 1 EFSGPSTPTGTLEFEGGEVSLEGGK 25 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EFS(0.002)GPS(0.031)T(0.472)PT(0.472)GT(0.023)LEFEGGEVSLEGGK 158.89 6.095900000000001e-10 104480000.0 86901.0 104430.0 63168.0 71632.0 76914.0 105910.0 94450.0 146480.0 156020.0 128780.0 True False 82080.4282971514 99413.02604737427 67239.9103523736 78439.88374305396 82966.69421920316 105248.97640468022 103997.92774317002 145971.89506868893 127690.70094413571 127639.10938932393 0.6430664448369837 0.7788602296193194 0.5267970818197962 0.6145442734467628 0.6500099743421017 0.8245825038127657 0.8147810513622142 1.1436298464246288 1.0004041986430225 1.0 16.96171092169779 -6.807309688270971 1.4450224658705488 1.0537279621769333 0.6428078343939482 0.8085424455276077 0.0825202035465178 0.16969472342633932 0.71426823934945 0.05062719804966059 0.028676759187477092 1.5584408079325589e-07 6.807309688270971 -0.41092012778298515 EFSGPSTPTGT(ph)LEFEGGEVSLEGGK ddPTM_KYSE-520_SHP099_60min_R1 1 EFSGPSTPTGTLEFEGGEVSLEGGK 25 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 EFSGPS(0.013)T(0.301)PT(0.301)GT(0.384)LEFEGGEVSLEGGK 151.42 8.4545e-07 106450000.0 72001.0 87793.0 71670.0 59618.0 62297.0 78143.0 76684.0 106060.0 115200.0 105840.0 True False 68006.96099956497 83575.29250002031 76289.9628760545 65284.076795194705 67199.41947855656 77655.28055132591 84435.9670837187 105692.10261459001 94282.58395567509 104902.33994227399 0.6482883130823208 0.7966961704191765 0.7272474848324222 0.6223319406518429 0.6405902815469634 0.7402626156295304 0.8049007022167705 1.0075285515342234 0.8987653088344572 1.0 16.678687333338303 -7.000882444915135 2.269081105717512 0.9671287347152158 0.693647114257631 0.8226122876880348 0.05657346970362512 0.13164375475438733 1.3456716346256847 0.03289142112367479 0.017769869152997938 9.979701584135292e-08 7.000882444915135 -0.27348162045758473 EFTGS(ph)PPSSATK ddPTM_KYSE-520_SHP099_60min_R1 7 EFTGSPPSSATK 12 0 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 EFTGS(0.986)PPS(0.012)S(0.002)ATK;EFTGS(1)PPSSATK;EFT(0.001)GS(0.66)PPS(0.168)S(0.168)AT(0.002)K;EFTGS(0.982)PPS(0.011)S(0.007)ATK;EFTGS(0.659)PPS(0.168)S(0.168)AT(0.005)K;EFTGS(0.907)PPS(0.086)S(0.007)ATK;EFTGS(0.999)PPS(0.001)SATK 263.89 1.3382e-21 7692920000.0 21748000.0 19639500.0 17941900.0 18090280.0 19818400.0 20627300.0 19403600.0 21562600.0 23760800.0 20319600.0 True False 20541595.086436834 18695988.940509498 19098463.58205501 19809574.772159006 21377995.32872895 20498557.369391568 21365105.24888696 21487804.373348657 19446437.681024358 20139584.152409606 1.019961233111118 0.928320505479385 0.9483047632723821 0.9836138930301044 1.0614913975853457 1.0178242616265247 1.0608513605446381 1.0669437963930226 0.9655828806523636 1.0 24.263530558705675 -5.591454678631491 5.547437355153896 1.0329426418596939 0.9623493585494858 0.3861797123140758 0.03646726211716557 0.18142948448187723 10.333905755076696 0.01057986142627297 0.013805334042107932 2.5618005901893237e-06 5.591454678631491 -0.07059328331020809 EFTGS(ph)PPSSATKK ddPTM_KYSE-520_SHP099_60min_R1 5 EFTGSPPSSATKK 13 1 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.379)GS(0.619)PPSSAT(0.001)KK;EFT(0.029)GS(0.968)PPS(0.001)S(0.001)ATKK;EFT(0.125)GS(0.865)PPS(0.009)S(0.001)AT(0.001)KK;EFT(0.014)GS(0.986)PPSSATKK;EFTGS(0.956)PPS(0.013)S(0.013)AT(0.019)KK 105.53 0.0004524 11672900000.0 5433700.0 5023730.0 4782380.0 4366430.0 4717150.0 4539310.0 4023920.0 4384240.0 5840210.0 4201980.0 True False 5132281.829187596 4782382.470027538 5090659.866878542 4781414.194384949 5088362.868087924 4510978.48251845 4430697.103274708 4369032.09472931 4779775.083713308 4164753.726290976 1.2323134010995354 1.1482989834039015 1.2223195419077406 1.14806649051087 1.2217680089860898 1.0831321079183747 1.0638557270037126 1.0490493272504395 1.1476729232607121 1.0 21.98979975678453 -6.323621794453439 6.137859910335447 1.0705067931801373 1.1908438533697239 0.6771563668138367 0.04341510294500372 0.1369508450490092 10.485238914485384 0.014385786363624146 0.012710910170682386 4.746551589883764e-07 6.323621794453439 0.12033706018958656 EFTGSPPS(ph)SATK ddPTM_KYSE-520_SHP099_60min_R1 1 EFTGSPPSSATK 12 0 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 EFT(0.008)GS(0.332)PPS(0.527)S(0.126)AT(0.008)K 61.235 0.036164 1426800000.0 2455900.0 2173600.0 1974900.0 2060500.0 2111300.0 2414900.0 2189300.0 2315600.0 2671100.0 2246000.0 True False 2319666.331284727 2069176.9933598842 2102205.2139517237 2256329.3004880864 2277447.298346257 2399827.7133383253 2410615.8095089663 2307567.7240651045 2186095.5729514263 2226102.187361559 1.04203048020633 0.9295067428204332 0.94434353727639 1.0135784930710452 1.023065028764719 1.0780402296727767 1.0828864115919576 1.0365955961797517 0.9820284016442437 1.0 21.086088389234952 -5.528978835497925 2.9733262961210603 1.0402548573843025 0.9681811339132145 0.3084257437300313 0.0402520836326082 0.280906682891113 5.067666125629285 0.012654938107634633 0.018267855443983724 2.958156623083771e-06 5.528978835497925 -0.07207372347108798 EFTMAEIEHFVDPSEKDHPK ddPTM_KYSE-520_SHP099_60min_R1 2 EFTMAEIEHFVDPSEKDHPK 20 1 P41250 P41250 GARS Glycine--tRNA ligase 0 ; 194.92 1.5895e-12 235505000.0 249593.0 197480.0 133773.0 138815.0 220035.0 163226.0 161657.0 139802.0 143621.0 148493.0 False True 235747.57873868977 187992.7643764767 142396.22162436793 152007.93586374834 237350.50267210617 162207.2459883896 177998.86718028167 139317.0594920321 117543.04679078136 147177.46754580567 1.6017912433866186 1.277320282182245 0.9675137369791358 1.032820705495828 1.6126823394228886 1.1021201050215532 1.2094165645626667 0.9465923134509214 0.7986483851830019 1.0 17.16719729020539 -7.23911076388105 2.374131934756512 0.8852701335265475 1.2554307075147635 0.36986625662019357 0.20613682466582733 0.36297399297999083 3.9308890033451784 0.14027685749012386 0.061612317200418994 5.766193817492792e-08 7.23911076388105 0.370160573988216 EFVISDR ddPTM_KYSE-520_SHP099_60min_R1 1 EFVISDR 7 0 Q14019;H3BT58 Q14019 COTL1 Coactosin-like protein 0 125.25 0.017247 187470000.0 216560.0 253470.0 195760.0 150160.0 217220.0 255460.0 213030.0 239800.0 220060.0 209900.0 False True 204546.98509834276 241292.92073377367 208379.00282707426 164431.16125274988 234313.9781872651 253865.57938192415 234565.15137244534 238968.1897697408 180102.65126116222 208040.44929972876 0.9832077645806615 1.1598365680615181 1.001627344723034 0.7903807255090574 1.126290483297714 1.220270289919313 1.1274978119014818 1.1486621499526455 0.8657097783983542 1.0 17.66650453323914 -3.9735841937450807 18.73544976614883 1.0552529523449914 0.7580437215398281 0.020412655935434287 0.13006609434940508 8154.698301638533 45428.83147322812 0.03286970689591082 79834.22647593488 0.00010627125423840519 3.9735841937450807 -0.29720923080516326 EFVISDRK ddPTM_KYSE-520_SHP099_60min_R1 1 EFVISDRK 8 1 Q14019;H3BT58 Q14019 COTL1 Coactosin-like protein 0 94.302 0.0090202 185840000.0 158950.0 188910.0 119340.0 115670.0 203770.0 229820.0 155260.0 197830.0 224720.0 191520.0 False True 150132.72664103075 179834.480040309 127032.8473507512 126663.24202254642 219805.5397072968 228385.60813259977 170955.1959915782 197143.77390386898 183916.5127302023 189823.28180030535 0.790907865553451 0.9473784160443258 0.6692163687507527 0.667269266558127 1.1579482644206565 1.2031485598951033 0.9006018354030121 1.038564774742778 0.9688827997594257 1.0 17.534297424003128 -5.761009526286551 24.999999863221486 1.047487699438156 0.774350743611714 0.6052841150908297 0.10920313626339184 8.676134396128544 504576.96121629095 0.035391076045869586 0.042927679063377085 1.7337659670324794e-06 5.761009526286551 -0.27313695582644193 EFVSPS(ph)LTPPPAIAHPALPTIPER ddPTM_KYSE-520_SHP099_60min_R1 1 EFVSPSLTPPPAIAHPALPTIPER 24 0 O94763-2;O94763-3;O94763 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 EFVS(0.083)PS(0.502)LT(0.415)PPPAIAHPALPTIPER 64.733 0.016985 46108000.0 51059.0 54325.0 45535.0 62933.0 40915.0 58434.0 47623.0 54997.0 77705.0 66939.0 True False 48226.655486406926 51715.14545651258 48470.25895857598 68914.13339850373 44134.77772549472 58069.291731008285 52437.197595690646 54806.228243396305 63595.730783643565 66345.97253775397 0.7268965039130852 0.7794767862824565 0.7305682184550709 1.0387086173058713 0.665221656075355 0.8752496875068662 0.7903599207299496 0.826067146912482 0.9585469675262445 1.0 16.017721270523015 -13.999999999914726 0.06762540808866015 1.6868534659271963 0.567696878089648 0.32611864543325897 0.09782516667101275 406.5843015577072 1.9826853839922176 43.318574291090684 5.7700840555812425 1.0000000001963506e-14 13.999999999914726 -1.1191565878375482 EFVSPSLT(ph)PPPAIAHPALPTIPER ddPTM_KYSE-520_SHP099_60min_R1 1 EFVSPSLTPPPAIAHPALPTIPER 24 0 O94763-2;O94763-3;O94763 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 EFVS(0.004)PS(0.159)LT(0.836)PPPAIAHPALPTIPER 129.24 4.5208e-09 0.0 21180.0 27169.0 22533.0 21923.0 21327.0 30866.0 29470.0 34369.0 32521.0 28240.0 True False 20005.103178716756 25863.760458499586 23985.513234074722 24006.55532860971 23005.313565969103 30673.353844838657 32449.115199483498 34249.78196078489 26616.006187695406 27989.815570387538 0.7147279383963362 0.924041832053468 0.8569371660830356 0.857688942902789 0.8219172973153884 1.0958755254282644 1.159318649952584 1.2236515769335838 0.9509175264396674 1.0 14.772614360330806 -6.265573420320822 23.510491509149833 1.1045162873456635 0.842478182387846 0.6726118250466631 0.08696168578369803 88.73998687161942 504665.933716525 0.029256806213720163 0.026767709946818697 5.425335247372522e-07 6.265573420320822 -0.26203810495781754 EFWEIVHSFTDEQKR ddPTM_KYSE-520_SHP099_60min_R1 2 EFWEIVHSFTDEQKR 15 1 A0A0D9SG63;S4R306;A0A1B0GVL3;Q05086-2;Q05086-3;Q05086 A0A0D9SG63 UBE3A Ubiquitin-protein ligase E3A 0 ; 150.12 1.0974e-05 238380000.0 319640.0 275760.0 204861.0 225230.0 314480.0 247320.0 217945.0 201843.0 209038.0 156497.0 False True 301908.9320134576 262512.07567580114 218066.66784918957 246635.791482131 339227.7868535643 245776.38414130392 239977.00753822285 201142.8537435102 171081.96861915308 155110.5583328235 1.9464112260214175 1.6924191267013833 1.4058789433358883 1.5900644942101243 2.1870064198059116 1.5845238827258756 1.5471352183730773 1.2967708704388412 1.1029679117785098 1.0 17.242937368005904 -7.357891337554217 1.375220486869662 1.018438598393237 1.732954289004723 0.6588526011770601 0.19987814800532896 0.29749117341183257 0.9877918719713451 0.1837254704463037 0.06641146637365175 4.38640433868822e-08 7.357891337554217 0.714515690611486 EGAAHAFAQYNMDQFT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 1 EGAAHAFAQYNMDQFTPVK 19 0 P52907 P52907 CAPZA1 F-actin-capping protein subunit alpha-1 1 EGAAHAFAQYNMDQFT(1)PVK 141.36 3.7604e-06 354460000.0 112120.0 110010.0 70381.0 93584.0 86614.0 102000.0 81600.0 118240.0 98877.0 106650.0 True False 105900.48009432109 104724.95447162353 74917.87187358156 102478.19522294447 93430.02903375278 101363.38016502108 89848.9243392553 117829.85303742354 80923.42928633068 105705.16397244454 1.0018477443725216 0.9907269478236982 0.7087437269678832 0.9694719857741171 0.8838738385393199 0.9589255279093528 0.8499956006186918 1.114702902009023 0.7655579561602683 1.0 16.68968633228756 EGAGS(ph)PAAPGTLPLEK ddPTM_KYSE-520_SHP099_60min_R1 8 EGAGSPAAPGTLPLEK 16 0 O60248-2;O60248 O60248-2 SOX15 Protein SOX-15 1 EGAGS(1)PAAPGTLPLEK;EGAGS(1)PAAPGTLPLEK;EGAGS(1)PAAPGTLPLEK;EGAGS(1)PAAPGTLPLEK;EGAGS(1)PAAPGTLPLEK;EGAGS(1)PAAPGTLPLEK;EGAGS(1)PAAPGTLPLEK;EGAGS(1)PAAPGTLPLEK 300.33 7.801299999999999e-38 59101100000.0 37869300.0 41272000.0 31511300.0 27017300.0 27791900.0 36757900.0 27667300.0 38578400.0 43809900.0 38756000.0 True False 35768614.43842206 39289231.16946502 33542568.81786261 29585016.06895257 29978964.415719792 36528480.311449274 30464180.69082695 38444580.534666285 35855126.517706014 38412651.991711766 0.9311675342316849 1.0228200640232388 0.873216689779712 0.77018936561152 0.7804450581071128 0.9509491903691254 0.7930767367324744 1.000831198610328 0.933419710918226 1.0 25.195078234516725 -7.284186533744001 24.746631193389867 0.9753441042237079 0.8755082353333306 0.2711271677509095 0.07773963790325569 1136.9507778341706 1236881.0352671714 0.04602000555811729 0.02213238478788793 5.1977270110476234e-08 7.284186533744001 -0.09983586889037732 EGALS(ph)RVSDES(ph)LSKVQEAESPVFK ddPTM_KYSE-520_SHP099_60min_R1 1 EGALSRVSDESLSKVQEAESPVFK 24 2 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 2 EGALS(0.558)RVS(0.442)DES(0.997)LS(0.003)KVQEAESPVFK 189.79 2.4677e-15 843420000.0 660870.0 746690.0 660160.0 675460.0 660740.0 660470.0 599080.0 672420.0 1098100.0 498200.0 True False 624210.2236883163 710817.8915954606 702714.9698933468 739655.5153155465 712736.478903664 656347.7617410924 659640.8528573659 670087.5319640072 898712.7208483245 493786.3355937344 1.2641302091475632 1.4395252366405906 1.4231154635909358 1.4979262527104484 1.4434106971523655 1.3292141042175505 1.335883165062083 1.3570394392511616 1.8200437235017892 1.0 18.913527388187823 EGALSRVS(ph)DES(ph)LSKVQEAESPVFK ddPTM_KYSE-520_SHP099_60min_R1 2 EGALSRVSDESLSKVQEAESPVFK 24 2 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 2 EGALS(0.001)RVS(0.999)DES(0.978)LS(0.022)KVQEAESPVFK;EGALS(0.029)RVS(0.963)DES(0.884)LS(0.124)KVQEAESPVFK 116.94 0.00018439 1592870000.0 2510690.0 2968900.0 2684600.0 2910200.0 2713900.0 2606900.0 2188540.0 2613700.0 4495400.0 2257070.0 True False 2371417.0207635686 2826269.587590246 2857653.6115118754 3186784.5330164614 2927468.490021268 2590629.3701195433 2409778.98129208 2604633.6847421653 3679148.679812 2237074.115773889 1.0600529522211228 1.263377716304465 1.2774067659905424 1.4245323883308318 1.3086148864623315 1.1580436034070987 1.077201226504043 1.1643037065140436 1.644625295992593 1.0 21.0931816239725 EGALSRVS(ph)DESLSK ddPTM_KYSE-520_SHP099_60min_R1 1 EGALSRVSDESLSK 14 1 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 1 EGALS(0.001)RVS(0.996)DES(0.003)LSK 107.72 0.00067118 0.0 168320.0 200950.0 162100.0 137390.0 186020.0 142540.0 127100.0 136420.0 261250.0 127930.0 True False 158982.95406239864 191296.0603679007 172549.22536917045 150447.5042921903 200658.71569098174 141650.3549874716 139948.50837646247 135946.79086066727 213813.58557656372 126796.63972803393 1.253842013506045 1.5086839901925757 1.3608343702110026 1.1865259569566284 1.5825239227267738 1.1171459692567358 1.1037241103284596 1.0721639875651239 1.6862717027452179 1.0 16.95215698717014 -6.293744032965438 24.96426099258909 1.194612836513483 1.3740709382278975 0.16538211326999375 0.2049963149839065 1253.6597496882132 968794.0986677534 0.07046981021662226 0.062152747942678825 5.084590328382862e-07 6.293744032965438 0.17945810171441456 EGASGRPGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 EGASGRPGSPK 11 1 Q15025-4;Q15025-3;Q15025;E7EMV7;A0A0A0MRZ4;Q15025-7;Q15025-8;Q15025-5;Q15025-6;Q15025-2;E7EW15 Q15025-4 TNIP1 TNFAIP3-interacting protein 1 1 EGASGRPGS(1)PK;EGAS(0.187)GRPGS(0.813)PK;EGASGRPGS(1)PK;EGAS(0.016)GRPGS(0.984)PK 142.95 0.00013243 3774220000.0 3747290.0 3240080.0 2767460.0 2857200.0 2944760.0 2811920.0 2859050.0 3020010.0 3664270.0 2836110.0 True False 3539420.353662583 3084421.6933407714 2945854.8996925564 3128747.428951497 3176495.85860755 2794369.7642512354 3148070.6756390673 3009534.29018563 2998930.936729705 2810984.2718601935 1.2591391524650335 1.097274618082309 1.0479798585792552 1.1130433778204747 1.1300297516447775 0.9940894341618058 1.1199175702095991 1.0706336283390316 1.066861514221542 1.0 21.42264395083582 -4.269038820421594 3.686398236524683 1.0732687034551933 1.2778819199966474 0.6257887432128163 0.043969711577485984 0.16415126342889447 4.202129117482724 0.010622770688531577 0.09119199704933513 5.382216701711526e-05 4.269038820421594 0.20461321654145403 EGDELEDNGKNFY(ph)ESDDDQKEK ddPTM_KYSE-520_SHP099_60min_R1 2 EGDELEDNGKNFYESDDDQKEK 22 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 EGDELEDNGKNFY(0.927)ES(0.073)DDDQKEK;EGDELEDNGKNFY(0.688)ES(0.312)DDDQKEK 94.18799999999999 0.00081279 1058150000.0 3478300.0 3619600.0 3245400.0 2917200.0 3087600.0 2952600.0 2572000.0 2836200.0 4292300.0 2846600.0 True False 3285351.765180852 3445708.9828696316 3454603.676823596 3194449.8109118417 3330576.553959124 2934171.7281886428 2832002.860301037 2826361.884174054 3512926.520077642 2821381.3386212885 1.1644479674577735 1.2212843885022044 1.224436991034945 1.132229013917296 1.1804772748609238 1.0399770098509515 1.0037646529855262 1.0017652862038136 1.245108724577546 1.0 21.427970243456304 -6.255268574294215 21.976714786742885 1.0548360504821879 1.1859210030065233 0.43919359871455066 0.07138898710672635 90.15126020816616 321064.1637718031 0.02386047077230319 0.023202334751772007 5.555605839240985e-07 6.255268574294215 0.13108495252433539 EGDELEDNGKNFYES(ph)DDDQKEK ddPTM_KYSE-520_SHP099_60min_R1 7 EGDELEDNGKNFYESDDDQKEK 22 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 EGDELEDNGKNFYES(1)DDDQKEK;EGDELEDNGKNFYES(1)DDDQKEK;EGDELEDNGKNFYES(1)DDDQKEK;EGDELEDNGKNFYES(1)DDDQKEK;EGDELEDNGKNFY(0.003)ES(0.997)DDDQKEK;EGDELEDNGKNFYES(1)DDDQKEK;EGDELEDNGKNFYES(1)DDDQKEK 252.28 1.3085999999999998e-27 22268700000.0 10348240.0 10650110.0 9355520.0 8303790.0 9067420.0 8499860.0 7569540.0 8007650.0 12128120.0 7887290.0 True False 9774202.498495003 10138462.72945899 9958591.788561257 9092979.704974497 9780974.36743751 8446809.220877025 8334742.97479126 7979873.331149562 9925959.133025201 7817414.746818761 1.2503113644408521 1.296907361040907 1.2738983552860401 1.1631696666311349 1.2511776187156765 1.0805118436775267 1.0661763824393509 1.0207816253316881 1.2697240014116555 1.0 22.898260150182203 -6.042346171336945 1.3814064105510742 1.0848443912070764 1.265504264621146 0.5042574447438637 0.07706823744569914 0.34773726531323185 1.361808005436185 0.032248995780962394 0.03498028936252247 9.070972047715001e-07 6.042346171336945 0.18065987341406964 EGDGWVYHKPLWK ddPTM_KYSE-520_SHP099_60min_R1 1 EGDGWVYHKPLWK 13 1 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 0 127.37 5.634e-05 697910000.0 863880.0 763140.0 577460.0 525190.0 925190.0 902990.0 707310.0 595620.0 668530.0 609180.0 False True 815958.8542979149 726477.6089035064 614683.995568668 575103.8996958681 997997.1893889875 897354.1044628671 778811.7974803762 593553.9332387534 547141.8042698568 603783.1391348691 1.3514104674520422 1.2032094999281366 1.0180542577744358 0.9525007613162335 1.6529066890124957 1.4862192172981865 1.289886628163047 0.9830581458257137 0.9061892736087813 1.0 19.203670944063855 -7.2838529225998805 6.0469254996180855 0.9551204925784199 1.2762894445921493 0.3597387211929097 0.19326193229613012 0.2289457425616872 31.263150502587315 0.11703237033192636 0.05774062360034857 5.201721272791853e-08 7.2838529225998805 0.3211689520137294 EGDIIPPLTGAT(ph)PPLIGHLK ddPTM_KYSE-520_SHP099_60min_R1 7 EGDIIPPLTGATPPLIGHLK 20 0 Q12888;Q12888-2;A6NNK5;Q12888-3;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 EGDIIPPLTGAT(1)PPLIGHLK;EGDIIPPLT(0.001)GAT(0.999)PPLIGHLK;EGDIIPPLTGAT(1)PPLIGHLK;EGDIIPPLT(0.001)GAT(0.999)PPLIGHLK;EGDIIPPLTGAT(1)PPLIGHLK;EGDIIPPLTGAT(1)PPLIGHLK;EGDIIPPLTGAT(1)PPLIGHLK 192.63 6.7307e-13 2240268000.0 2283455.0 2643500.0 1897117.0 1750843.0 1992049.0 2365480.0 1725450.0 2215751.0 2563210.0 2258660.0 True False 2156787.199195313 2516502.292025605 2019408.1973145236 1917242.5923098554 2148811.9230916286 2350716.1618897473 1899875.3247692166 2208065.0769411735 2097795.6772658546 2238650.0296108914 0.9634320553312179 1.124115988984222 0.9020651600757467 0.8564280110558857 0.959869517195201 1.0500596925810393 0.8486700911885907 0.9863377695195019 0.9370806734049809 1.0 21.094197577189284 -4.776493012091088 24.999616527322573 0.9401034906944825 1.0437740625881082 0.25423866042853227 0.06923413769460482 269.97929399277103 448356.6950789939 0.017826940802322354 0.037337599312799265 1.6730425558632445e-05 4.776493012091088 0.10367057189362572 EGDIVKR ddPTM_KYSE-520_SHP099_60min_R1 2 EGDIVKR 7 1 P25705-2;P25705-3;P25705;K7EK77;K7EQH4;K7EJP1;K7ERX7 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 ; 82.305 0.029661 1106780000.0 2412300.0 2481300.0 1699540.0 1503110.0 2658300.0 2368860.0 1740680.0 1997960.0 2545200.0 1988160.0 False True 2278484.910199173 2362094.623492767 1809095.067760144 1645965.1224735004 2867493.086341992 2354075.0660559977 1916644.9217996942 1991029.5430873674 2083055.8392706995 1970546.4491650735 1.1562705924362118 1.1987003018850908 0.9180677108761699 0.8352835951524517 1.4551766021841086 1.194630589425297 0.9726464060828317 1.0103946262880394 1.057095528072072 1.0 20.910164326001293 -6.772605315642917 24.99492188895667 1.0109003506184586 1.1218916585368617 0.11422992547303634 0.15838438278115616 597.658108383358 1337844.5535748024 0.07133293604638924 0.04858484199652082 1.6880864518727295e-07 6.772605315642917 0.11099130791840306 EGDNVNYDWIHWDPEHSYEFK ddPTM_KYSE-520_SHP099_60min_R1 11 EGDNVNYDWIHWDPEHSYEFK 21 0 E9PGM4;Q04446 E9PGM4 GBE1 1,4-alpha-glucan-branching enzyme 0 ;;;;;;;;;; 308.59 1.3614e-53 10243792000.0 7127112.0 6844027.0 4142486.0 3869523.0 6794097.0 6842031.0 5607287.0 4987787.0 4792021.0 5561272.0 False True 6731756.889814464 6515229.669826035 4409517.275771951 4237281.3025054885 7328753.780776013 6799327.346606459 6174126.291807474 4970485.531055238 3921910.7834189143 5512003.456684146 1.221290396988264 1.182007544266926 0.7999844902899577 0.7687370546488206 1.3295989087032918 1.2335491804456755 1.120123806221566 0.9017566063075968 0.7115218294471493 1.0 22.39414536210867 -7.365122584465743 4.59705071886225 0.8429971115095326 1.08733623365199 0.23686165485634847 0.1830044104979061 0.36341606305942264 12.466806009445413 0.11659272536866216 0.0531313226498112 4.313972929393276e-08 7.365122584465743 0.24433912214245745 EGDPVSLSTPLETEFGSPSELS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 EGDPVSLSTPLETEFGSPSELSPR 24 0 Q9BUR4;E9PMG4;E9PMR3 Q9BUR4 WRAP53 Telomerase Cajal body protein 1 1 EGDPVSLSTPLETEFGSPSELS(1)PR;EGDPVSLSTPLETEFGSPS(0.008)ELS(0.992)PR 191.44 2.5541000000000002e-15 102509000.0 121112.0 140426.0 112410.0 86791.0 97085.0 135039.0 102355.0 128865.0 157658.0 140542.0 True False 114393.67592921354 133679.72417627665 119656.12846235931 95039.59054533426 104725.03716191264 134196.17151082624 112702.04228853536 128417.99739231699 129031.2814347556 139296.9072200215 0.8212219367406848 0.9596747468709235 0.8590006113585904 0.6822806941091508 0.7518116464459467 0.9633822759529143 0.8090778505980813 0.9219012823413149 0.9263039934615979 1.0 17.087803700876545 -7.679073518113246 0.9307477842967814 0.996622478144322 0.830432354622524 0.3176698712370821 0.08048698739287616 0.7143510306284203 1.266489426475455 0.08170053185855912 0.02977066102934758 2.0937579909130908e-08 7.679073518113246 -0.16619012352179807 EGDVDVS(ph)DS(ph)DDEDDNLPANFDTCHR ddPTM_KYSE-520_SHP099_60min_R1 2 EGDVDVSDSDDEDDNLPANFDTCHR 25 0 F5H148;H3BMT1;Q9NYV6-2;Q9NYV6-3;Q9NYV6;Q9NYV6-4 F5H148 RRN3 RNA polymerase I-specific transcription initiation factor RRN3 2 EGDVDVS(1)DS(1)DDEDDNLPANFDTCHR;EGDVDVS(1)DS(1)DDEDDNLPANFDTCHR 169.5 1.7103e-10 1461180000.0 690650.0 732770.0 703240.0 741020.0 689390.0 699520.0 616140.0 705260.0 853750.0 742180.0 True False 652338.2677233585 697566.6292898069 748571.9756237834 811446.3180042129 743641.0709074625 695154.0362062311 678425.444146921 702813.6176689208 698730.5212860913 735604.8626073025 0.8868052685394016 0.9482898560748069 1.0176278239522776 1.1031008075831574 1.0109246263974876 0.9450101155426078 0.9222688411034794 0.9554227458174279 0.9498720805209029 1.0 19.48857149094068 -6.267433157982461 23.861832836138507 0.9497133047324449 0.9982924246475289 0.10603890698453788 0.054575236379926555 566.2197788870347 2254167.8291726205 0.020958394597014304 0.018982881840140072 5.40215252589939e-07 6.267433157982461 0.04857911991508401 EGDVLTLLESER ddPTM_KYSE-520_SHP099_60min_R1 7 EGDVLTLLESER 12 0 P62857 P62857 RPS28 40S ribosomal protein S28 0 ;;;;;; 269.01 7.1439e-21 1061090000.0 800606.0 958626.0 1320820.0 516595.0 932266.0 1002026.0 708210.0 762043.0 1067925.0 937137.0 False True 756194.7892115075 912572.1680330376 1405962.170586721 565692.0334800493 1005630.0303320567 995771.984051328 779802.77826353 759399.6506951738 874016.740198475 928834.695261554 0.8141327978694507 0.982491473120589 1.513683950178897 0.6090341331626873 1.082679227490396 1.0720658790323556 0.8395495799647562 0.8175832089060063 0.9409820118232743 1.0 19.82506233741001 -6.763678712894976 24.998949202749486 0.8843272933847482 1.0186432372725103 0.057018620250040564 0.22044971294445406 172.3243877553203 1923705.066544753 0.08885032946411371 0.0631750049084964 1.7231428689838013e-07 6.763678712894976 0.13431594388776202 EGEAAGGDHETES(ph)TSDKETDIDDR ddPTM_KYSE-520_SHP099_60min_R1 2 EGEAAGGDHETESTSDKETDIDDR 24 1 Q92903 Q92903 CDS1 Phosphatidate cytidylyltransferase 1 1 EGEAAGGDHET(0.001)ES(0.472)T(0.472)S(0.056)DKETDIDDR;EGEAAGGDHET(0.007)ES(0.33)T(0.33)S(0.33)DKET(0.001)DIDDR 153.77 2.1881999999999997e-07 311361000.0 123939.0 141173.0 127025.0 236448.0 143051.0 135231.0 158470.0 171191.0 217690.0 121158.0 True False 117063.85660372874 134390.83717500683 135213.23474718595 258919.9468293166 154308.29985114853 134386.97316760747 174489.694118159 170597.17837727966 178162.9835183242 120084.63437949757 0.9748445936369976 1.1191343327931371 1.1259828157520821 2.156145523257077 1.2849962082866955 1.1191021554257385 1.4530559635692257 1.4206411940944066 1.483645134441468 1.0 16.87369203494994 -5.028453150790612 24.996128882366026 1.4351031578291993 1.0658812903523862 0.22737223887831082 0.29079493157959485 967.4219730496542 849881.5158503869 0.0790138852103767 0.1372235277210567 9.365842478069054e-06 5.028453150790612 -0.36922186747681307 EGEDGDQPT(ph)TPPKPLK ddPTM_KYSE-520_SHP099_60min_R1 1 EGEDGDQPTTPPKPLK 16 1 M0R0Q7;P18858-2;P18858-3;P18858;B4E135 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 EGEDGDQPT(0.5)T(0.5)PPKPLK 146.1 3.1145999999999996e-05 8119900000.0 2416700.0 2523700.0 1937800.0 1960500.0 1936700.0 2638000.0 2306400.0 2747000.0 2570500.0 2885400.0 True False 2282640.8334279903 2402457.663849072 2062713.6885896267 2146825.330554181 2089107.2716843612 2621535.2634835867 2539553.4202948334 2737471.298154623 2103761.9970317953 2859837.600807234 0.798171488053615 0.8400678637034986 0.7212695182437608 0.7506808533282469 0.7304985678538801 0.916672772867808 0.88800616495776 0.9572121498724013 0.7356228886696138 1.0 21.44750179354385 -6.2662388551111405 24.98575469998156 0.8961100193969299 0.7685601716311612 0.4590695793902043 0.07125037734340181 389.58311268639227 2028137.423192364 0.02404892991302473 0.02188872727374159 5.41702880423504e-07 6.2662388551111405 -0.12754984776576872 EGEDGDQPTT(ph)PPKPLK ddPTM_KYSE-520_SHP099_60min_R1 5 EGEDGDQPTTPPKPLK 16 1 M0R0Q7;P18858-2;P18858-3;P18858;B4E135 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 EGEDGDQPT(0.059)T(0.941)PPKPLK;EGEDGDQPT(0.01)T(0.99)PPKPLK;EGEDGDQPT(0.151)T(0.849)PPKPLK;EGEDGDQPT(0.157)T(0.843)PPKPLK;EGEDGDQPT(0.168)T(0.832)PPKPLK 262.23 8.612299999999998e-29 15684990000.0 8499200.0 9292400.0 6469030.0 6265410.0 6502860.0 9255000.0 7413950.0 8964500.0 8880000.0 9048600.0 True False 8027732.433264855 8845979.155823234 6886034.024613958 6860872.68263579 7014598.085787861 9197236.112032067 8163424.419179184 8933404.241830025 7267615.846583288 8968436.443704264 0.8951094746175324 0.9863457483754603 0.7678076404776076 0.765002096597567 0.7821428104908995 1.0255116563253808 0.910239423607647 0.9960938339593373 0.8103548363421885 1.0 23.096425057084666 -6.253980768155865 24.980569572286672 0.9458082823805581 0.8393543791476239 0.29807737232300235 0.08370558518822763 828.3314757898003 2774269.2633119193 0.029241300765084192 0.02869420901199812 5.572104233111578e-07 6.253980768155865 -0.10645390323293424 EGEEPT(ph)VYSDEEEPKDESAR ddPTM_KYSE-520_SHP099_60min_R1 1 EGEEPTVYSDEEEPKDESAR 20 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPT(0.7)VY(0.001)S(0.298)DEEEPKDESAR 137.09 9.303100000000001e-07 9470100000.0 5336800.0 5735300.0 4160400.0 6735000.0 5390500.0 5385300.0 6170100.0 7294300.0 8186900.0 4804500.0 True False 5040757.065352954 5459767.579139196 4428586.040875362 7375092.375048415 5814701.682250507 5351688.345124395 6793833.922373034 7268997.775802423 6700365.33495414 4761935.867844437 1.058552069000192 1.1465437021121923 0.9299969936134459 1.5487592818814804 1.221079376880105 1.1238472112281759 1.426695804168477 1.5264795615764657 1.4070675290272572 1.0 22.18311676033019 -5.250162171256795 24.915221569291845 1.335828681454506 1.0551822009846943 0.3547957296634421 0.17027422949741422 791.1403153517167 1747897.0547138103 0.04659696917856785 0.07978725410014169 5.621313787633145e-06 5.250162171256795 -0.28064648046981167 EGEEPTVYS(ph)DEEEPKDESAR ddPTM_KYSE-520_SHP099_60min_R1 7 EGEEPTVYSDEEEPKDESAR 20 1 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 EGEEPT(0.009)VYS(0.991)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR;EGEEPT(0.002)VYS(0.998)DEEEPKDESAR;EGEEPTVYS(1)DEEEPKDESAR 273.26 8.1831e-36 28743900000.0 6693510.0 7631280.0 5599720.0 7998580.0 7189350.0 7216860.0 7761380.0 9190310.0 10585670.0 6346990.0 True False 6322207.657118621 7264661.854015195 5960686.9110687915 8758762.638339233 7755110.94319408 7171816.899781707 8545976.034169238 9158430.959644478 8663579.171024922 6290760.6064834995 1.0049989266167132 1.1548145460388295 0.9475303995713139 1.3923217216869 1.2327779466288011 1.1400556066924812 1.3584964631083603 1.4558543127846015 1.3771910446084858 1.0 22.58480303108077 -5.261705296127578 24.999999700849077 1.2940531518930107 1.0476846135851674 0.4001673885105991 0.1357085528732659 24.056667781847267 2261766.110894991 0.03765990304754577 0.06006506740712651 5.473872833639834e-06 5.261705296127578 -0.24636853830784333 EGEFVAQFK ddPTM_KYSE-520_SHP099_60min_R1 2 EGEFVAQFK 9 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ; 130.75 0.0029798000000000003 199190000.0 492610.0 607200.0 379000.0 358500.0 521640.0 531830.0 426130.0 511900.0 510520.0 527680.0 False True 465283.9413063109 578029.2005742183 403430.94642144034 392571.7322130445 562690.1002743995 528510.6516976778 469207.3790280255 510124.3383783579 417822.4371619033 523005.16572882724 0.8896354602117942 1.1052074404823764 0.7713708637260671 0.7506077529195742 1.0758786664951383 1.01052663784148 0.8971371790834369 0.9753715102746271 0.7988877826467586 1.0 18.99646567049709 -4.7470521279273505 24.999907275092777 0.912459363923223 0.997421311896646 0.08545614040831884 0.11419949139685448 659.1327301110632 1145318.5959127103 0.02979687587144604 0.07804963794521562 1.7903909423240047e-05 4.7470521279273505 0.08496194797342294 EGERPSLR ddPTM_KYSE-520_SHP099_60min_R1 2 EGERPSLR 8 1 E9PN86;E7ESM3;J3KNJ2;Q7L2H7 E9PN86 EIF3M Eukaryotic translation initiation factor 3 subunit M 0 ; 141.48 0.00065547 1043240000.0 685500.0 585910.0 449480.0 371724.0 616330.0 593740.0 467820.0 529560.0 554560.0 539140.0 False True 647473.9484896291 557762.0041311606 478454.19999342784 407052.53719710436 664831.6645619989 590034.2484233301 515111.81108321535 527723.0799602325 453865.8833199585 534363.6390445722 1.2116729155585793 1.0437873451277935 0.8953719247231923 0.7617519371731641 1.2441558818461151 1.104181133054441 0.9639724214847802 0.987572958563923 0.8493577222646707 1.0 19.027462316914214 -4.332300531396343 3.4839543734316427 0.981020740460028 1.2241893883076644 0.2406572755618045 0.12587502868733588 0.39593760185356025 8.046583889359159 0.03382954437563764 0.2224266560788305 4.652640198093392e-05 4.332300531396343 0.24316864784763648 EGFES(ph)DTDSEFTFK ddPTM_KYSE-520_SHP099_60min_R1 8 EGFESDTDSEFTFK 14 0 E9PMS6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 EGFES(0.56)DT(0.44)DSEFTFK;EGFES(1)DTDSEFTFK;EGFES(0.999)DT(0.001)DSEFTFK;EGFES(0.76)DT(0.239)DSEFTFK;EGFES(1)DTDSEFTFK;EGFES(0.999)DT(0.001)DSEFTFK;EGFES(0.99)DT(0.01)DSEFTFK;EGFES(0.976)DT(0.021)DS(0.003)EFTFK 379.69 2.521499999999999e-81 18092300000.0 20493100.0 18611530.0 18054970.0 17803710.0 18155130.0 17333870.0 17628090.0 18067800.0 21718200.0 18262810.0 True False 19356306.89101798 17717404.162323948 19218822.255173385 19495769.245519396 19583835.442440685 17225682.887657378 19410109.370779186 18005127.01885621 17774722.3512686 18101015.71165117 1.069349212185856 0.9788071810202176 1.061753802180433 1.0770538822841007 1.0819191450032863 0.9516417841994159 1.072321558081704 0.9947025794396036 0.9819737540931175 1.0 24.109567318483997 -7.382759417952054 7.643678582396569 0.990249757756832 1.0395524453565512 0.2295058809538818 0.041523351912831116 0.4321327593178905 25.147037038980766 0.02293363801362474 0.010918954279212327 4.14229077877677e-08 7.382759417952054 0.04930268759971923 EGFGLSENPFASLS(ph)PDEQKDEK ddPTM_KYSE-520_SHP099_60min_R1 2 EGFGLSENPFASLSPDEQKDEK 22 1 B4DT96;C9JYA1;O15504-2;O15504 B4DT96 NUPL2 Nucleoporin-like protein 2 1 EGFGLSENPFAS(0.067)LS(0.933)PDEQKDEK;EGFGLSENPFASLS(1)PDEQKDEK 277.07 9.1951e-37 2075910000.0 723970.0 741360.0 645840.0 652300.0 668890.0 651040.0 579130.0 670140.0 807860.0 653070.0 True False 683809.9409015859 705743.9527959526 687471.8797805357 714294.3958788544 721527.8375365057 646976.6178689746 637674.1121641294 667815.4407518514 661172.9884933315 647284.3078807715 1.0564290414213817 1.0903152512789622 1.0620864300439161 1.103524969139876 1.114700030190458 0.9995246447224956 0.9851530531489229 1.0317188793565837 1.0214568473906496 1.0 19.30404000346559 -6.270976283003717 24.991098524759366 1.0081520090818819 1.0853941011761663 0.7912351902258143 0.019990652731774076 321.55591704282284 842622.9621572781 0.007362907681431106 0.006580608388653819 5.358259183832151e-07 6.270976283003717 0.07724209209428445 EGGFLLLHTLLR ddPTM_KYSE-520_SHP099_60min_R1 1 EGGFLLLHTLLR 12 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 69.45100000000001 0.044768 3889700.0 7606.4 7043.8 6307.1 5684.3 8996.7 6599.4 6513.2 6128.8 5767.4 4711.6 False True 7184.457829017521 6705.405275040649 6713.665757716808 6224.5341629528875 9704.689105779255 6558.210696676868 7171.617818706346 6107.5406232726755 4720.185544322577 4669.858889569333 1.5384742877487871 1.4358903413586956 1.437659234781709 1.332916970329896 2.0781546798888924 1.404370207272298 1.5357247377913237 1.3078640634976295 1.010776911239364 1.0 12.18916324093657 -7.574800003007607 2.1247705392510365 0.9830255033541386 1.5404821729846465 0.546251667224378 0.1933654805588661 0.2553299648914774 2.1063727293118633 0.17225161671872202 0.05446777108788989 2.6619506327171063e-08 7.574800003007607 0.5574566696305079 EGGGVHAVPPDPEDEGLEETGSKDKDQPPS(ph)PSPPPQSEALSSTSR ddPTM_KYSE-520_SHP099_60min_R1 1 EGGGVHAVPPDPEDEGLEETGSKDKDQPPSPSPPPQSEALSSTSR 45 2 H3BU99;H3BPL8;H3BR21;H3BUX9;Q7L1V2 H3BU99 MON1B Vacuolar fusion protein MON1 homolog B 1 EGGGVHAVPPDPEDEGLEET(0.001)GS(0.001)KDKDQPPS(0.913)PS(0.085)PPPQSEALSSTSR 80.345 0.0017758 745810000.0 149150.0 181530.0 169800.0 123610.0 133410.0 152280.0 140700.0 165620.0 206840.0 157430.0 True False 140876.35217684627 172809.0263179149 180745.5796896057 135357.85723529846 143908.60800093503 151329.5640346022 154923.32909967177 165045.50287599856 169283.07001208203 156035.29267868667 0.902849283379394 1.1074996133968824 1.158363448337315 0.8674823170552325 0.9222824242543426 0.969841895616688 0.9928736405724268 1.0577446937973578 1.0849024416589883 1.0 17.251512854895047 -9.466883031601963 9.075412584136066 1.0000004517577468 1.0078707876282929 0.0004932921873452845 0.08984995498485233 0.0 0.0 0.09181624075655505 0.022268709340377512 3.4128481737885267e-10 9.466883031601963 0.007870335870546086 EGGKPPT(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 2 EGGKPPTPPPK 11 1 Q8TD55-2;Q8TD55 Q8TD55-2 PLEKHO2 Pleckstrin homology domain-containing family O member 2 1 EGGKPPT(1)PPPK;EGGKPPT(1)PPPK 93.823 0.0067346 2282640000.0 7687800.0 8397900.0 6283300.0 5425000.0 5765300.0 8446100.0 6135800.0 7787400.0 9065900.0 8537000.0 True False 7261342.408750652 7994452.27849511 6688331.571635453 5940590.3689142745 6218996.30993022 8393384.756978273 6756066.543637293 7760387.326992822 7419761.092740925 8461368.821685493 0.8581758533135544 0.9448178476756939 0.7904550330549409 0.7020838464917449 0.7349870264479743 0.9919653585442364 0.7984602356916873 0.9171550715416 0.8768984367783319 1.0 23.012459640768075 -6.255856801918922 24.994358717795777 0.9043157879149193 0.8071619783591473 0.3083646284414443 0.08187868740392286 725.3467431038574 3247528.5110280635 0.029312192639786388 0.02855181124451445 5.548086174989354e-07 6.255856801918922 -0.09715380955577202 EGHAQNPMEPSVPQLS(ph)LMDVK ddPTM_KYSE-520_SHP099_60min_R1 2 EGHAQNPMEPSVPQLSLMDVK 21 0 A0A087WU80;P21580;A0A087WXL5;A0A087X1N1;D3TTY5 A0A087WU80 TNFAIP3 Tumor necrosis factor alpha-induced protein 3;A20p50;A20p37 1 EGHAQNPMEPSVPQLS(1)LMDVK;EGHAQNPMEPS(0.001)VPQLS(0.999)LMDVK 187.26 2.7150999999999997e-13 1623200000.0 491460.0 485660.0 376430.0 450830.0 414680.0 410380.0 420750.0 417820.0 429820.0 456710.0 True False 464197.73409877915 462328.16460947815 400695.2801092956 493676.7476530176 447312.95679355133 407818.6661972687 463283.51612428523 416370.67993992066 351775.5228804537 452663.9047150034 1.0254798963726464 1.0213497471165927 0.8851937959612063 1.0906032986302183 0.9881789825393279 0.9009303855451669 1.0234602567129092 0.9198230201324913 0.7771229806846011 1.0 18.788080745535904 -7.515680428584706 24.64955731946887 0.8751986637243545 0.9869688850368955 0.23655742067424612 0.0759561210085584 356.74331844962234 1221641.4252293506 0.04540106367518148 0.018659366686864867 3.0501385791868745e-08 7.515680428584706 0.111770221312541 EGHLS(ph)PDIVAEQK ddPTM_KYSE-520_SHP099_60min_R1 4 EGHLSPDIVAEQK 13 0 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 1 EGHLS(1)PDIVAEQK;EGHLS(1)PDIVAEQK;EGHLS(1)PDIVAEQK;EGHLS(1)PDIVAEQK 238.02 8.413e-16 1987820000.0 1744140.0 1678200.0 1573900.0 1593060.0 1642750.0 1735510.0 1608060.0 1759010.0 2123960.0 1880550.0 True False 1647389.0773431086 1597576.7529704452 1675356.1123290376 1744463.9434290456 1772025.079031076 1724678.038335251 1770618.39795322 1752908.4048660183 1738302.404674443 1863889.7900457596 0.883844681236579 0.8571197511260704 0.8988493425289413 0.9359265514224518 0.950713442658845 0.925311167830856 0.9499587408061022 0.940457109764512 0.9326208094265952 1.0 20.82988512671171 -1.0000000000000018 0.1627818933485367 0.9919916989538681 0.49155046867036317 0.7545386941073766 0.01870210078256115 32.48712680795209 0.3402839561991632 0.05746390313171898 3.916238708313684 0.09999999999999959 1.0000000000000018 -0.5004412302835048 EGHSLEMENENLVENGADS(ph)DEDDNSFLK ddPTM_KYSE-520_SHP099_60min_R1 31 EGHSLEMENENLVENGADSDEDDNSFLK 28 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(0.998)DEDDNS(0.002)FLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(0.956)DEDDNS(0.044)FLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(0.98)DEDDNS(0.02)FLK;EGHSLEMENENLVENGADS(0.996)DEDDNS(0.004)FLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(0.991)DEDDNS(0.009)FLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(0.995)DEDDNS(0.005)FLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK;EGHSLEMENENLVENGADS(1)DEDDNSFLK 372.14 2.2123e-93 58337214000.0 11871399.0 11145888.0 10942689.0 11035305.0 10648651.0 10997629.0 10743765.0 11321670.0 13648136.0 11328229.0 True False 11212868.832422798 10610422.81016102 11648072.24186146 12084097.069314577 11486639.251163816 10928988.718047662 11829849.615241904 11282397.769267637 11169978.543910364 11227869.704288807 0.9986639609951763 0.9450076541330067 1.0374249567050235 1.076259111262995 1.023047074261662 0.9733804368849258 1.0536147930825341 1.0048564924972367 0.9948439764707698 1.0 23.420580891273374 -4.769586821582213 24.999980531448948 1.0221942317854313 0.9718358039401577 0.2830443180783875 0.03083256960892837 200.3578778280779 614793.7285248161 0.00831034012398154 0.017794503457756718 1.6998600937037123e-05 4.769586821582213 -0.05035842784527367 EGIPALDNFLDKL ddPTM_KYSE-520_SHP099_60min_R1 2 EGIPALDNFLDKL 13 1 P13639 P13639 EEF2 Elongation factor 2 0 ; 116.54 0.00024484 1200720000.0 565570.0 733580.0 580190.0 468910.0 634510.0 732420.0 514950.0 534350.0 626110.0 555430.0 False True 534196.7046641567 698337.7156739704 617589.9757368221 513475.0654170678 684442.3271319475 727848.6951025963 567006.1714276907 532496.4645682274 512424.2069486791 550509.3223180007 0.9703681354837782 1.2685302271240684 1.1218519845156634 0.9327272847170058 1.243289258481586 1.3221369113930388 1.0299665208941922 0.9672796499177753 0.9308184006603947 1.0 19.070407469013148 -6.988819547750058 24.973442361514323 0.9691539985430124 1.1456339167070588 0.3263329172122763 0.11611670482327924 257.91867771870665 576103.7921556726 0.05021997239246492 0.033825545349118635 1.0260781800078436e-07 6.988819547750058 0.1764799181640464 EGIQWEAKEDNS(ph)EGEEILEEVGGDLEEEDDHHMEFCR ddPTM_KYSE-520_SHP099_60min_R1 8 EGIQWEAKEDNSEGEEILEEVGGDLEEEDDHHMEFCR 37 1 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 EGIQWEAKEDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EGIQWEAKEDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EGIQWEAKEDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EGIQWEAKEDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EGIQWEAKEDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EGIQWEAKEDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EGIQWEAKEDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR;EGIQWEAKEDNS(1)EGEEILEEVGGDLEEEDDHHMEFCR 154.78 1.5749000000000002e-07 679438000.0 374762.0 423185.0 395719.0 414269.0 378322.0 318541.0 297001.0 428372.0 566178.0 317990.0 True False 353973.20479047496 402854.557386365 421227.67991278606 453641.00120548357 408093.7890422732 316552.86746221565 327024.759530431 426886.0775147769 463374.3473859047 315172.85599247634 1.1231081549704423 1.2782019445100368 1.3364973280657184 1.439340325730058 1.2948253039024877 1.0043785860473093 1.0376044551826429 1.354450643189169 1.4702228906316925 1.0 18.26578376363678 -6.041676571735268 24.971479314603695 1.1828460208345253 1.3050194014589738 0.12449372100418687 0.15851052484742822 1174.598019628824 703784.5980466821 0.05613997467459586 0.05614529611333966 9.084968550884112e-07 6.041676571735268 0.12217338062444849 EGITGPPADSSKPIGPDDAIDALSSDFT(ph)CGSPTAAGKK ddPTM_KYSE-520_SHP099_60min_R1 1 EGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGKK 38 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;H0YA91;E7EVY3 P20810-6;E7EVY3 CAST Calpastatin 1 EGITGPPADSSKPIGPDDAIDALSS(0.001)DFT(0.589)CGS(0.33)PT(0.08)AAGKK 115.57 7.7105e-05 1113800000.0 132790.0 116310.0 130840.0 91772.0 106870.0 113000.0 98681.0 129590.0 147910.0 122490.0 True False 125423.87398969773 110722.29301513087 139274.15575140197 100493.983287742 115280.06099287844 112294.72508477815 108656.6385137507 129140.48253653332 121053.27250767281 121404.83389577785 1.0331044486858745 0.9120089329406966 1.147187894272516 0.8277593244270064 0.9495508316566923 0.9249609054379134 0.8949943344680076 1.0637177976570216 0.9971042224858456 1.0 16.88946634000593 -9.72718600135447 5.99760204721732 1.000000000703005 0.9697454734397633 0.008226148941836375 0.08750671963284823 7.58960709187258e-10 2.0515287468566893e-10 0.08257244465749834 0.020026759177362404 1.8741916499585183e-10 9.72718600135447 -0.030254527263241737 EGITGPPADSSKPIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_KYSE-520_SHP099_60min_R1 1 EGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK 37 1 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;H0YA91;E7EVY3 P20810-6;E7EVY3 CAST Calpastatin 1 EGITGPPADSSKPIGPDDAIDALSSDFTCGS(0.999)PT(0.001)AAGK 299.55 2.8720999999999997e-54 637440000.0 200130.0 218320.0 134020.0 147690.0 142270.0 182450.0 124420.0 162680.0 256170.0 211550.0 True False 189028.38995073608 207831.5794949993 142659.14363958169 161726.41319538254 153465.83959443064 181311.2618736088 136997.58782218327 162115.70104979756 209655.98552018483 209675.8315834093 0.9015268403766428 0.9912042695885227 0.6803795294968543 0.771316426762555 0.7319195466425596 0.8647217969968225 0.6533780588235581 0.7731730444350604 0.9999053488278806 1.0 17.677801052303337 -7.764833510672518 24.91572191219264 0.9999528252743576 0.7931925967809268 0.41709703071946447 0.09642095142181807 87.41051428113228 641613.0514627837 0.08519716507679984 0.025489678570298564 1.7185670836260825e-08 7.764833510672518 -0.2067602284934308 EGKPEIEGKPES(ph)EGEPGSETR ddPTM_KYSE-520_SHP099_60min_R1 6 EGKPEIEGKPESEGEPGSETR 21 2 D6RD44;Q96EI5;Q96EI5-2 D6RD44 TCEAL4 Transcription elongation factor A protein-like 4 1 EGKPEIEGKPES(0.985)EGEPGS(0.015)ETR;EGKPEIEGKPES(0.946)EGEPGS(0.05)ET(0.004)R;EGKPEIEGKPES(1)EGEPGSETR;EGKPEIEGKPES(0.998)EGEPGS(0.002)ETR;EGKPEIEGKPES(1)EGEPGSETR;EGKPEIEGKPES(0.998)EGEPGS(0.001)ETR 167.28 3.0214000000000003e-09 6718070000.0 3251300.0 2739080.0 2787930.0 2777130.0 2959650.0 2643200.0 2621940.0 3061910.0 3479570.0 2842950.0 True False 3070943.9076941395 2607490.4853570974 2967644.4286457147 3041067.600225418 3192557.6168950344 2626702.8083547456 2886991.282868471 3051288.9488651645 2847767.800821605 2817763.67478163 1.0898514787377016 0.9253758605427305 1.053191385496763 1.0792486351649393 1.133011134137234 0.932194148098069 1.024568280408472 1.0828761035474816 1.0106482052801324 1.0 21.42611918753039 -6.260484027424915 24.999998527127584 1.016144041563166 1.0499917376380246 0.11839940070575139 0.060612620696773 284.9686524064158 7457186.894139803 0.021586580938684395 0.02053943259486329 5.4892874385422e-07 6.260484027424915 0.0338476960748586 EGLELLK ddPTM_KYSE-520_SHP099_60min_R1 9 EGLELLK 7 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ;;;;;;;; 119.21 0.019418 4801760000.0 4092040.0 5256340.0 3655440.0 2913430.0 4816130.0 5268760.0 3955220.0 4360880.0 4461050.0 4729180.0 False True 3865046.3839204954 5003817.53647281 3891075.5113107963 3190321.511245329 5195132.03096876 5235875.714492711 4355052.236827323 4345753.125117044 3651035.7739189668 4687283.144446366 0.8245813757805348 1.0675304610948209 0.8301345131925858 0.6806334102144689 1.1083461081552348 1.1170384961054325 0.9291207939907195 0.9271368917122115 0.7789236667396174 1.0 22.16032051557071 -3.974631138509358 16.88304009620276 0.9353272161199855 0.5276701454362871 0.05828707379936837 0.13605767312293285 3072181186.4543824 52521068804.15894 0.03555519342551525 34549284618.9838 0.0001060153768572961 3.974631138509358 -0.4076570706836984 EGLELPEDEEEKK ddPTM_KYSE-520_SHP099_60min_R1 7 EGLELPEDEEEKK 13 1 P08238;Q58FF7;Q58FF6;P07900;P07900-2;Q58FG0 P08238;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 ;;;;;; 167.32 1.9272999999999997e-06 2914010000.0 3569070.0 3401090.0 2714822.0 2150716.0 3626650.0 3318241.0 2905219.0 3431421.0 3248506.0 3128380.0 False True 3371086.5723353424 3237696.5312598315 2889823.7699887827 2355119.402003654 3912046.7221841738 3297530.627079999 3198906.8887250815 3419518.201450679 2658659.1985721774 3100664.9870428084 1.0872140609909755 1.0441942437476013 0.9320012907117996 0.75955300293496 1.2616799101263767 1.063491425503839 1.0316841394000353 1.1028338165330043 0.8574480666832103 1.0 21.564146226960812 -4.525180091425523 24.859264273008353 1.0073837605944587 1.076459141906624 0.04112043419447886 0.1293326428400972 234.94286009157304 2537908.387310037 0.03376771000569592 0.090689020021833 2.984144909539082e-05 4.525180091425523 0.0690753813121654 EGLELPEDEEEKKK ddPTM_KYSE-520_SHP099_60min_R1 10 EGLELPEDEEEKKK 14 2 P08238;Q58FF7;P07900;P07900-2;Q58FG0 P08238;P07900 HSP90AB1;HSP90AB3P;HSP90AA1;HSP90AA5P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 ;;;;;;;;; 198.85 3.1671999999999997e-11 53884500000.0 33400300.0 29866640.0 20762340.0 18767800.0 32226950.0 28396610.0 22827230.0 27001250.0 26712880.0 25417430.0 False True 31547518.77715267 28431801.783659395 22100713.65731858 20551486.06925519 34763027.61873716 28219376.223802365 25134829.18069583 26907588.965889115 21862494.368905187 25192251.344661307 1.2522707218796527 1.128593129477672 0.8772821989965626 0.8157860045172352 1.3799095262720167 1.1201609509895019 0.9977206418283198 1.0680898899332123 0.8678261450236858 1.0 24.586476720727614 -4.524739760896871 24.430600563030318 1.0255956023382178 1.2213514061189543 0.19241290468620287 0.1515199700757787 66.37087873733162 871312.5284908488 0.040565060853536936 0.10910378925924714 2.9871720639746233e-05 4.524739760896871 0.19575580378073654 EGLELPEDEEEKKKQEEK ddPTM_KYSE-520_SHP099_60min_R1 13 EGLELPEDEEEKKKQEEK 18 3 P07900;P07900-2;Q58FG0 P07900 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 ;;;;;;;;;;;; 257.83 2.2164e-29 78005300000.0 47059960.0 40718660.0 28910270.0 22350770.0 36577170.0 35223440.0 26668550.0 32629920.0 35931240.0 28798900.0 False True 44449450.20709557 38762474.45364532 30773872.262267485 24474980.460795958 39455585.18337119 35003597.44548832 29364467.29396628 32516734.423400592 29407032.568849977 28543764.15120517 1.5572385608160524 1.3580014972204952 1.0781294330785787 0.8574545505331531 1.3822838842965042 1.2263132942124735 1.0287524496914138 1.1391887296696177 1.0302436782013684 1.0 24.76667226406346 -4.5675212443257704 3.130919909186103 1.1024222993843904 1.5366438793281842 0.5622049318066022 0.13378171399338262 0.1921013450350302 3.64443185508617 0.0364016165702559 0.14306967069719312 2.706940785618006e-05 4.5675212443257704 0.43422157994379385 EGLEQALPSGKPS(ph)SPVELDLFGDPSPSSK ddPTM_KYSE-520_SHP099_60min_R1 1 EGLEQALPSGKPSSPVELDLFGDPSPSSK 29 1 Q9H201 Q9H201 EPN3 Epsin-3 1 EGLEQALPS(0.041)GKPS(0.547)S(0.411)PVELDLFGDPSPSSK 104.4 0.00096548 113690000.0 148170.0 152810.0 87066.0 87584.0 97359.0 136330.0 93709.0 109480.0 169510.0 126880.0 True False 139950.714730428 145468.77822751392 92678.41367052557 95907.95702691023 105020.59940306583 135479.11390095414 103182.02023170689 109100.23943282408 138731.2569993619 125755.9419111463 1.112875563600097 1.1567547108851195 0.7369704545333382 0.762651494389622 0.8351144113513843 1.0773177938317842 0.8204941942593125 0.8675553439050186 1.1031785448148717 1.0 16.940267042763605 -4.740077053704367 24.993428812013338 0.8918921346559237 1.1348153811293071 0.3819906013694616 0.11886640041642212 243.1753780453045 284505.22168606817 0.031027679780801738 0.08192255016741204 1.8193780309896996e-05 4.740077053704367 0.24292324647338348 EGLIS(ph)QDGSSLEALLR ddPTM_KYSE-520_SHP099_60min_R1 1 EGLISQDGSSLEALLR 16 0 J3KMZ8;Q92785;Q92785-2 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 EGLIS(1)QDGSSLEALLR 90.367 0.002045 8105300.0 13883.0 15634.0 12220.0 14014.0 14146.0 12425.0 12403.0 17723.0 17847.0 12567.0 True False 13112.882314925628 14882.919172887568 13007.720752691308 15345.886346537269 15259.209720270039 12347.450966180262 13656.816281614994 17661.523049579286 14606.43468625812 12455.666156978057 1.052764432641716 1.1948713930928285 1.044321563275359 1.2320405952707731 1.2250817843027486 0.9913119708384951 1.0964340332744078 1.4179509009788884 1.1726739061704166 1.0 13.604514561759943 EGLISQDGSS(ph)LEALLR ddPTM_KYSE-520_SHP099_60min_R1 1 EGLISQDGSSLEALLR 16 0 J3KMZ8;Q92785;Q92785-2 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 EGLISQDGS(0.149)S(0.85)LEALLR 156.11 2.3494e-06 28296000.0 65054.0 78837.0 64822.0 48976.0 56496.0 72406.0 55896.0 66740.0 95376.0 57363.0 True False 61445.32493806609 75049.55218325046 69000.52983886715 53630.66431482869 60941.913781731644 71954.08729635809 61546.51317238988 66508.49451723314 78058.12263330272 56854.80844773867 1.0807410422382666 1.3200211949045 1.2136269864015619 0.9432916191095141 1.071886713640938 1.2655761097585754 1.0825208078743922 1.169795419825716 1.3729379231847079 1.0 15.794994748549962 -7.531782490882872 24.978410022764614 1.2147681501572472 1.1428468540621277 0.011777858535989005 0.13227247515981877 750.4275804558255 2105182.751983186 0.08863031648528105 0.03361673575402744 2.9391212930787505e-08 7.531782490882872 -0.07192129609511944 EGLLAIFK ddPTM_KYSE-520_SHP099_60min_R1 1 EGLLAIFK 8 0 P14923;C9JTX4;C9J826;C9JK18;C9JKY1;A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y7Z0 P14923;A0A2R8Y804 JUP;CTNNB1 Junction plakoglobin;Catenin beta-1 0 132.69 0.0058261 57005000.0 95033.0 129270.0 74461.0 79644.0 114440.0 117920.0 87902.0 99651.0 111990.0 88787.0 False True 89761.33004641133 123059.67516177414 79260.87520181233 87213.34181415832 123445.77692547013 117184.01753979696 96787.99200084826 99305.33393971833 91655.43903816017 88000.41625524069 1.0200102893384413 1.3983987848971744 0.9006875032490782 0.9910560145670277 1.4027862841855427 1.3316302641104643 1.0998583429437385 1.1284643660285458 1.0415341533421645 1.0 16.425222727480648 -7.709651686762332 1.752935069798266 1.0021579609707412 1.1712438085847658 0.11022961973571888 0.16248156923127724 0.8301397532629452 4.836059190374186 0.15743410476676342 0.047400745604350425 1.9514090430921048e-08 7.709651686762332 0.16908584761402468 EGLLLWCQR ddPTM_KYSE-520_SHP099_60min_R1 4 EGLLLWCQR 9 0 P12814-3;P12814;P12814-2;P12814-4;H9KV75;G3V2N5;A0A494C1A0;P35609;P35609-2;G3V2W4;Q08043;G3V2X9;A0A087WSZ2;A0A494C033;A0A494C166;O43707 P12814-3;O43707 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 0 ;;; 167.9 0.00074192 3197660000.0 2054810.0 2241210.0 1545060.0 1472060.0 2242930.0 2120980.0 1616710.0 1632950.0 1626680.0 1588760.0 False True 1940825.59313782 2133538.9074752056 1644657.0397834084 1611964.1398090217 2419435.830474002 2107742.1770824143 1780142.824369084 1627285.6775833936 1331315.9172657796 1574684.822436576 1.2325168601896468 1.3548990103136265 1.0444356968136401 1.0236741453535838 1.5364571982921047 1.338516855595913 1.1304756348731388 1.0334040529236994 0.8454491326116794 1.0 20.58663166739072 -7.2349905442289435 2.390403138242037 0.9325875530904342 1.2502699902701355 0.45162494199160075 0.1462137104718702 0.30733817360518106 3.3780527701127316 0.10191777267072627 0.04505370287129097 5.8211589187774906e-08 7.2349905442289435 0.31768243717970135 EGLPVNNIFQQIS(ph)PVVGDKQPTILK ddPTM_KYSE-520_SHP099_60min_R1 2 EGLPVNNIFQQISPVVGDKQPTILK 25 1 K7EKS6;U3KQB4;B9TWZ6;U3KQ43;Q9Y2X0-5;Q9Y2X0-4;Q9Y2X0-2;Q9Y2X0-3;Q9Y2X0 K7EKS6 MED16 Mediator of RNA polymerase II transcription subunit 16 1 EGLPVNNIFQQIS(1)PVVGDKQPTILK;EGLPVNNIFQQIS(1)PVVGDKQPTILK 272.54 3.1276e-38 255700000.0 244273.0 317726.0 250524.0 174585.0 197126.0 306805.0 189361.0 202027.0 287717.0 241527.0 True False 230722.6897438469 302461.9660435514 266673.1778925723 191177.5059091057 212638.6947064857 304890.1161914639 208503.45786526604 201326.21549045603 235474.84555533875 239387.25868516281 0.9638052209256827 1.2634839786579584 1.113982337060367 0.7986118683139206 0.8882623740060607 1.2736271674026272 0.8709881177907028 0.8410063952285619 0.9836565523523974 1.0 17.86898684175204 -5.0903248513106885 10.60394361932212 0.9518994308156589 1.1323330848635853 0.21669724268303237 0.14100547617049167 0.782975270222163 88.30061487640988 0.039050020133623034 0.06772876853189237 8.12222748071009e-06 5.0903248513106885 0.18043365404792644 EGLSGDALSSPSAPEPVVGT(ph)PDDKLDADYIKR ddPTM_KYSE-520_SHP099_60min_R1 2 EGLSGDALSSPSAPEPVVGTPDDKLDADYIKR 32 2 K7EJ08;Q92503-3;Q92503;Q92503-2 K7EJ08 SEC14L1 SEC14-like protein 1 1 EGLSGDALSSPSAPEPVVGT(0.999)PDDKLDADY(0.001)IKR;EGLSGDALSSPSAPEPVVGT(1)PDDKLDADYIKR 171.2 2.5585e-10 4541000000.0 834300.0 1044310.0 835340.0 692570.0 915070.0 1067220.0 863610.0 1012670.0 1233270.0 963120.0 True False 788019.715864183 994139.7800587323 889187.3529912557 758391.6445712371 987080.8029639109 1060559.0841148417 950912.1268213752 1009157.2841289558 1009339.2562067329 954587.5060960207 0.8255080973005289 1.0414338902511606 0.9314885720930581 0.7944705327988564 1.0340390971601736 1.1110129530735355 0.9961497722826096 1.0571658205082834 1.057356449525126 1.0 19.864517928560776 -5.914842528872587 11.171410618007892 1.047957331996542 0.9109305509370439 0.5101572807787991 0.06888259557203853 0.3964618379067008 49.5281796712792 0.021301529030320072 0.02416123341653038 1.2166270583007295e-06 5.914842528872587 -0.13702678105949817 EGLYLS(ph)DTLPR ddPTM_KYSE-520_SHP099_60min_R1 5 EGLYLSDTLPR 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PRT1 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 EGLY(0.04)LS(0.951)DT(0.009)LPR;EGLY(0.003)LS(0.916)DT(0.081)LPR;EGLYLS(0.999)DT(0.001)LPR;EGLYLS(0.998)DT(0.002)LPR;EGLYLS(0.999)DT(0.001)LPR 186.76 9.7831e-07 575716000.0 1056462.0 1000874.0 996544.0 838316.0 983381.0 1001069.0 901437.0 964294.0 1313572.0 974140.0 True False 997857.9468552154 952790.5106974983 1060782.8207667768 917989.3005911029 1060767.49002749 994820.9570433091 992563.049137319 960949.0891819111 1075060.4372554184 965509.8774694515 1.0335036131070419 0.986826269654237 1.0986763010100222 0.9507818842797368 1.0986604226232295 1.030358135383017 1.0280195700729364 0.9952762903891837 1.1134639451572395 1.0 19.88093149291186 EGMNIVEAMER ddPTM_KYSE-520_SHP099_60min_R1 6 EGMNIVEAMER 11 0 P62937;P62937-2 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed 0 ;;;;; 239.36 2.4926e-13 2691260000.0 1459010.0 1806250.0 1538330.0 1011280.0 1756920.0 1990730.0 1374530.0 1548970.0 1515780.0 1712030.0 False True 1378075.8068356717 1719475.0387634758 1637493.213215025 1107391.7471475808 1895179.608492637 1978305.1156461993 1513480.906520057 1543596.984602315 1240552.5617042822 1696862.7461391846 0.8121315704355946 1.0133259408727902 0.9650121772905669 0.6526112672737925 1.116872659739084 1.1658604210313246 0.8919288905149398 0.909676983665538 0.7310859788317412 1.0 20.69443844388504 -10.923557084088571 2.4882564650506946 1.0476048433300682 0.9262001777764696 0.023100720173371392 0.1517464750863504 328908385.62263364 164567895.93613914 91112634.38832593 0.04018468621771855 1.192457517780007e-11 10.923557084088571 -0.12140466555359863 EGMNPS(ph)YDEYADS(ph)DEDQHDAYLER ddPTM_KYSE-520_SHP099_60min_R1 2 EGMNPSYDEYADSDEDQHDAYLER 24 0 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 2 EGMNPS(1)YDEYADS(1)DEDQHDAYLER;EGMNPS(0.989)Y(0.011)DEYADS(1)DEDQHDAYLER 223.86 1.7412000000000004e-21 1906810000.0 619950.0 520360.0 495960.0 580240.0 574220.0 520670.0 549460.0 570380.0 706560.0 595130.0 True False 585560.1376603146 495361.12452371593 527930.3751640578 635385.8351444823 619407.8471351239 517420.30539726967 605004.7790128342 568401.4849076928 578266.5149281413 589857.6112041331 0.992714388248639 0.8397978005445883 0.8950132458006987 1.0771851088729838 1.0500972359594836 0.8771952680936164 1.0256793631564398 0.963624905589266 0.9803493316762839 1.0 19.170007211281092 -5.218721091332496 24.969944058283456 0.9932912904252534 0.902237358575388 0.29269623580199433 0.0616619342817293 588.0484788563788 343728.78840097354 0.016809039082682133 0.029113891832874692 6.043366163648344e-06 5.218721091332496 -0.09105393184986543 EGMNPSYDEYADS(ph)DEDQHDAYLER ddPTM_KYSE-520_SHP099_60min_R1 25 EGMNPSYDEYADSDEDQHDAYLER 24 0 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 1 EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEY(0.002)ADS(0.997)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEY(0.001)ADS(0.998)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER;EGMNPSYDEYADS(1)DEDQHDAYLER 331.94 1.3284999999999996e-72 221501390000.0 29512400.0 28109710.0 26036270.0 25285688.0 25793260.0 26263200.0 23972830.0 25032720.0 31483310.0 25750170.0 True False 27875288.340489157 26759277.33806509 27714609.623704948 27688832.18510068 27823042.818425864 26099281.62696059 26396237.608674366 24945887.3370008 25766734.53365926 25522043.527129132 1.0922044040422783 1.0484770668783172 1.0859087202106361 1.0848987133678507 1.09015732963745 1.0226172367121729 1.03425251119159 0.9774251544741746 1.0095874378660168 1.0 24.605240513236836 -6.572690503812663 1.6777538064112196 0.9984809899860971 1.0792535746950307 0.8038664458990471 0.017717481349503943 0.1551280897758078 0.8865570460311278 0.008569049870533472 0.006149645534766426 2.6749119823594206e-07 6.572690503812663 0.08077258470893356 EGMS(ph)PAKR ddPTM_KYSE-520_SHP099_60min_R1 2 EGMSPAKR 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 EGMS(1)PAKR;EGMS(1)PAKR 88.681 0.0049093999999999995 755750000.0 1217440.0 995830.0 998230.0 1165320.0 1186760.0 1122140.0 1108400.0 1203920.0 1340650.0 1110100.0 True False 1149906.1762935272 947988.8320286971 1062577.5030244717 1276071.6624337651 1280151.2602592714 1115136.308023303 1220447.888941551 1199743.882517041 1097221.7550362488 1100265.377644732 1.045117114159366 0.8616001660054018 0.9657465595246337 1.1597853466637027 1.1634931774365287 1.013515766905621 1.1092304763366145 1.0904131920294142 0.9972337377233497 1.0 20.06942010474376 -5.122568165724126 6.705108040342205 1.082081876090615 0.944037553820398 0.3728789315231845 0.07013044156039473 0.22469624524756424 11.316901952297606 0.018775988745147392 0.03289037001901507 7.541050242091474e-06 5.122568165724126 -0.138044322270217 EGNDLYHEMIESGVINLK ddPTM_KYSE-520_SHP099_60min_R1 2 EGNDLYHEMIESGVINLK 18 0 F8W079;H0YH81;P06576;H0YI37;F8W0P7 F8W079 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial 0 ; 128.14 5.65e-05 182284000.0 570580.0 480580.0 321930.0 452380.0 567700.0 504490.0 444950.0 447470.0 436550.0 375820.0 False True 538928.7899769689 457492.2154347138 342682.1229062123 495374.0591869934 612374.7602288489 501341.29077893664 489929.8882935249 445917.8310102829 357283.52452994796 372490.5271835356 1.4468254912464522 1.228198254849299 0.9199754031257928 1.3298970659270213 1.6440008954297949 1.345916886986801 1.3152814703717925 1.1971252917005533 0.9591747936019464 1.0 18.506844211262322 -7.607385565001704 2.9590030705083517 0.9755324352533338 1.3127435228747466 0.37964818206020945 0.17107918905072916 0.31861050205690056 5.297861081821593 0.15750011047012014 0.05031631636488487 2.469530731446404e-08 7.607385565001704 0.33721108762141283 EGNTTEDDFPS(ph)SPGNGNK ddPTM_KYSE-520_SHP099_60min_R1 1 EGNTTEDDFPSSPGNGNK 18 0 Q15007 Q15007 WTAP Pre-mRNA-splicing regulator WTAP 1 EGNTTEDDFPS(0.798)S(0.202)PGNGNK 160.45 3.2195e-07 359630000.0 1220000.0 1290300.0 1087500.0 907520.0 939400.0 1328500.0 1034200.0 1229900.0 1433200.0 1302400.0 True False 1152324.1679902948 1228312.0512202135 1157601.990061521 993770.4279441624 1013325.4355451491 1320208.338717948 1138747.0288193354 1225633.7639608178 1172967.0080318896 1290861.749251868 0.892678219536783 0.9515442315430712 0.8967668231957612 0.7698503953038441 0.7849991961822651 1.0227341072605862 0.8821603316383863 0.9494694258863478 0.9086697384221776 1.0 20.299903066213236 -6.260915358053738 24.999995715876384 0.9450456580522902 0.8614265606511623 0.35596908548455897 0.062391469704119476 67.33581896340777 3212527.9665415 0.022997871990412713 0.021690347001331798 5.48383831929081e-07 6.260915358053738 -0.08361909740112794 EGNTTEDDFPSS(ph)PGNGNK ddPTM_KYSE-520_SHP099_60min_R1 3 EGNTTEDDFPSSPGNGNK 18 0 Q15007 Q15007 WTAP Pre-mRNA-splicing regulator WTAP 1 EGNTTEDDFPS(0.002)S(0.998)PGNGNK;EGNTTEDDFPSS(1)PGNGNK;EGNTTEDDFPS(0.008)S(0.992)PGNGNK 373.43 4.160899999999999e-91 1613410000.0 4024980.0 4202270.0 3346300.0 2777260.0 2931000.0 3977750.0 3131550.0 3819010.0 4529160.0 3808140.0 True False 3801706.335801296 4000386.6414641356 3562007.852269307 3041209.955386335 3161653.0248912363 3952923.386778552 3448117.6349827833 3805762.7456736383 3706778.71483234 3774402.8422880904 1.007233857819123 1.0598727291756307 0.9437275248844326 0.8057459901505148 0.8376564868668345 1.0472976923634998 0.9135531576943416 1.0083085734872268 0.9820834896852834 1.0 21.84781697942617 -7.27461818948342 24.034257482450453 0.9963970293923801 0.943829335549491 0.08591313403798884 0.07733562616615836 1468.1034939109643 2677365.7038734592 0.0465198048419932 0.02256899676334822 5.313513771514708e-08 7.27461818948342 -0.05256769384288906 EGPDLDRPGS(ph)DR ddPTM_KYSE-520_SHP099_60min_R1 5 EGPDLDRPGSDR 12 1 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 EGPDLDRPGS(1)DR;EGPDLDRPGS(1)DR;EGPDLDRPGS(1)DR;EGPDLDRPGS(1)DR;EGPDLDRPGS(1)DR 157.09 1.0475e-05 2935150000.0 5972740.0 5307680.0 4952230.0 5058300.0 5286860.0 5314120.0 5249370.0 5466140.0 6046890.0 5180970.0 True False 5641420.205837998 5052691.085809898 5271458.66964816 5539039.311166647 5702905.803881436 5280952.605907268 5780027.548514178 5447179.236146673 4948927.2056921255 5135070.6365336655 1.098606154646031 0.9839574649396884 1.0265601084713727 1.0786685721047204 1.1105798162361944 1.02840895085955 1.125598449881476 1.0607798064923388 0.9637505607971164 1.0 22.291952691296256 -7.752391896634522 24.703608260823877 0.9818752795096751 1.0631083908058476 0.38716387423295096 0.041385850241641035 156.55611782697414 427476.4317664656 0.02969941767000803 0.010854474471723892 1.7685123760955767e-08 7.752391896634522 0.0812331112961725 EGPDLDRPGS(ph)DRQER ddPTM_KYSE-520_SHP099_60min_R1 2 EGPDLDRPGSDRQER 15 2 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WZ99 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 EGPDLDRPGS(1)DRQER;EGPDLDRPGS(1)DRQER 141.97 8.0313e-06 3412500000.0 2564000.0 2759600.0 2775100.0 2190540.0 2431900.0 2288900.0 2008330.0 2081680.0 3523600.0 2120130.0 True False 2421769.8087927164 2627024.673755951 2953987.3863169914 2398728.2629901352 2623276.694381785 2274614.1260756557 2211351.5958119677 2074459.1379477668 2883803.0627275817 2101347.29763618 1.1524843187591987 1.2501620635061654 1.4057587670728926 1.1415191889929288 1.2483784557330084 1.082455112790915 1.052349413302376 0.9872043237599706 1.372359088843425 1.0 21.00288319072132 -6.259391024129347 23.800325118566075 1.095166091335847 1.2440193653400575 0.2545374454618682 0.1202682190949037 131.71917763260961 1530481.0844978613 0.04006598863516438 0.03816299027758326 5.503119908923386e-07 6.259391024129347 0.14885327400421056 EGPEPPEEVPPPTT(ph)PPVPK ddPTM_KYSE-520_SHP099_60min_R1 1 EGPEPPEEVPPPTTPPVPK 19 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 EGPEPPEEVPPPT(0.006)T(0.994)PPVPK 192.24 3.4982e-12 230780000.0 351910.0 457740.0 320190.0 263060.0 305380.0 400740.0 294300.0 474770.0 473540.0 447400.0 True False 332388.8507848075 435749.48331825243 340829.95972211374 288061.143308127 329411.66862548183 398238.8330130446 324050.71609121095 473123.13368215156 387557.0729719652 443436.38407193345 0.7495750523053336 0.9826651555222089 0.7686107229009538 0.6496109783842146 0.7428611644371637 0.8980743288499372 0.730771600461734 1.0669470315845855 0.8739857325489475 1.0 18.75836762300611 -7.256292189236047 24.999580161459903 0.9778497885651978 0.792628050703652 0.4455045368663495 0.09779415457938599 417.93292744636636 2029884.6653174642 0.04887687049826508 0.027122819684256765 5.542526914999525e-08 7.256292189236047 -0.18522173786154572 EGPGEEHFEDMAS(ph)DEDMKPK ddPTM_KYSE-520_SHP099_60min_R1 1 EGPGEEHFEDMASDEDMKPK 20 1 Q99856 Q99856 ARID3A AT-rich interactive domain-containing protein 3A 1 EGPGEEHFEDMAS(1)DEDMKPK 127.35 2.0516999999999997e-05 400270000.0 164890.0 178780.0 143090.0 101470.0 157680.0 153250.0 145400.0 171060.0 183390.0 181680.0 True False 155743.22299993425 170191.1404457491 152313.81035209468 111113.678291932 170088.51892352448 152293.50990479888 160098.45096725153 170466.632785704 150090.99888568802 180070.45654490116 0.8649015834593565 0.9451363855642326 0.8458567456017679 0.6170566811676041 0.9445664890681962 0.8457440094667833 0.8890878272823752 0.9466662997169532 0.8335126248111796 1.0 17.458201977766514 -6.789218937045599 1.3113973483749928 0.9224481768260859 0.8371810774332616 0.13936841931287147 0.09311783384342218 1.0470241866081988 3.6119548861303663 0.06215562355116925 0.03508048935305295 1.6247294887199302e-07 6.789218937045599 -0.08526709939282429 EGPPAPPPVKPPPS(ph)PVNIR ddPTM_KYSE-520_SHP099_60min_R1 4 EGPPAPPPVKPPPSPVNIR 19 1 Q8TF74-2;Q8TF74 Q8TF74-2 WIPF2 WAS/WASL-interacting protein family member 2 1 EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR;EGPPAPPPVKPPPS(1)PVNIR 207.23 3.7089999999999996e-14 14301350000.0 13679090.0 15619790.0 11581910.0 9863950.0 9545860.0 15041180.0 10664210.0 15048870.0 16687840.0 14041320.0 True False 12920283.60911014 14869391.842617236 12328498.450311217 10801416.842295287 10297064.873486282 14947302.416377567 11742252.419459917 14996668.982402658 13657748.922212461 13916924.82878165 0.928386390532889 1.0684394739178145 0.8858636948885863 0.7761353154654419 0.7398951277074429 1.0740377346484613 0.8437390130307894 1.0775849670027666 0.9813769270325305 1.0 23.730337123645825 -7.262729655913358 24.987673862176432 1.0221107095978463 0.9036100616156306 0.20935761571645684 0.10440574008298452 199.48673508515125 3863188.609142322 0.0567073101311537 0.029554435003028335 5.460976958071645e-08 7.262729655913358 -0.11850064798221571 EGPRDS(ph)ITLLDAK ddPTM_KYSE-520_SHP099_60min_R1 1 EGPRDSITLLDAK 13 1 Q96DY7 Q96DY7 MTBP Mdm2-binding protein 1 EGPRDS(0.999)IT(0.001)LLDAK 141.6 7.3993e-06 123030000.0 244150.0 178600.0 182290.0 197910.0 167600.0 185720.0 170320.0 204870.0 225670.0 182780.0 True False 230606.51279904132 170019.78791593463 194040.70507431246 216719.3068961888 180789.16648644552 184560.852590664 187537.60776301404 204159.3537870174 184694.0166777537 181160.7114006883 1.272938878502136 0.9385025406523584 1.0710970583745192 1.1962820482463914 0.9979490866900991 1.0187686456058087 1.0352002170504917 1.126951601197133 1.0195037061278176 1.0 17.466910584273254 -4.241350282744001 24.485146594831054 1.0518441707289707 1.2729391544876816 0.4927347763707246 0.0690867911409318 3340.881776333937 4071879.609866214 0.017253282939654356 0.6691980489761826 5.736535919211504e-05 4.241350282744001 0.22109498375871084 EGPTDHLESACPLNLPLQNNHT(ph)AADMYLS(ph)PVRSPK ddPTM_KYSE-520_SHP099_60min_R1 1 EGPTDHLESACPLNLPLQNNHTAADMYLSPVRSPK 35 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 EGPTDHLESACPLNLPLQNNHT(0.561)AADMY(0.456)LS(0.491)PVRS(0.491)PK 61.911 0.016747 808500000.0 100730.0 115770.0 97039.0 142680.0 79365.0 89553.0 94939.0 100830.0 129490.0 96597.0 True False 95142.30609972325 110208.23542568725 103294.28920788957 156240.26430169377 85610.57397492079 88994.0665090013 104536.3606353499 100480.24426389902 105977.88017726027 95741.2257313289 0.9937443914360743 1.1511053319387825 1.0788903987688254 1.6319016506028299 0.8941871520964546 0.9295271272036811 1.0918636129508317 1.0494982020166408 1.1069200270597923 1.0 16.546852655893215 EGPTDHLESACPLNLPLQNNHTAADMY(ph)LSPVRS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 EGPTDHLESACPLNLPLQNNHTAADMYLSPVRSPK 35 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 EGPTDHLES(0.004)ACPLNLPLQNNHT(0.371)AADMY(0.396)LS(0.371)PVRS(0.859)PK 41.673 0.06184 603110000.0 60124.0 90661.0 70352.0 79603.0 54125.0 67048.0 84725.0 79866.0 92326.0 57679.0 True False 56788.80186577749 86305.50947506455 74887.00248717993 87168.44518648542 58384.32957087622 66629.52856180721 93289.82983631614 79588.96348686452 75561.92574905968 57168.00893358299 0.993366795960201 1.5096819197487377 1.309945962508203 1.5247766506571276 1.0212762462779899 1.1655037459712212 1.631853751364666 1.3921940779733974 1.3217519231227117 1.0 15.802920424033683 -4.240237438889823 23.462651371313388 1.3336407181477974 0.9933659960313087 0.1912642643085063 0.199435078376185 3690.647350071323 4084027.5430636825 0.04921016179437766 1.9401705628746868 5.751254169311136e-05 4.240237438889823 -0.3402747221164887 EGPTDHLESACPLNLPLQNNHTAADMYLS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 2 EGPTDHLESACPLNLPLQNNHTAADMYLSPVR 32 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 EGPTDHLESACPLNLPLQNNHT(0.047)AADMY(0.033)LS(0.92)PVR;EGPTDHLESACPLNLPLQNNHTAADMYLS(1)PVR 193.89 1.2975999999999998e-15 1306130000.0 183922.0 170310.0 176131.0 228391.0 166622.0 155957.0 159566.0 179828.0 194599.0 183787.0 True False 173719.48002058303 162128.05195947815 187484.6860795638 250097.21197174175 179734.20345050402 154983.61451368837 175696.4884940882 179204.2186401706 159264.72704158377 182158.79016412224 0.9536705852298671 0.8900369387247428 1.0292376552931815 1.3729626319235435 0.9866897078563505 0.8508160071443741 0.9645238000087089 0.9837802418357654 0.8743180985012512 1.0 17.47483708917277 -5.9935507248924145 24.999733636701492 0.9336735350704385 1.0635406115860875 0.1850092783238727 0.12543671125821382 305.9619837545977 1186008.3707382486 0.04214094456715082 0.047667932225512896 1.0149608138694866e-06 5.9935507248924145 0.129867076515649 EGPTDHLESACPLNLPLQNNHTAADMYLS(ph)PVRS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 12 EGPTDHLESACPLNLPLQNNHTAADMYLSPVRSPK 35 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 EGPTDHLESACPLNLPLQNNHT(0.008)AADMY(0.186)LS(0.85)PVRS(0.956)PK;EGPTDHLESACPLNLPLQNNHT(0.004)AADMY(0.057)LS(0.939)PVRS(1)PK;EGPTDHLESACPLNLPLQNNHTAADMY(0.003)LS(0.997)PVRS(1)PK;EGPTDHLESACPLNLPLQNNHT(0.066)AADMY(0.18)LS(0.78)PVRS(0.973)PK;EGPTDHLESACPLNLPLQNNHTAADMY(0.058)LS(0.942)PVRS(1)PK;EGPTDHLESACPLNLPLQNNHT(0.001)AADMY(0.011)LS(0.989)PVRS(0.999)PK;EGPTDHLESACPLNLPLQNNHT(0.001)AADMY(0.081)LS(0.92)PVRS(0.998)PK;EGPTDHLESACPLNLPLQNNHTAADMY(0.002)LS(0.998)PVRS(1)PK;EGPTDHLESACPLNLPLQNNHT(0.008)AADMY(0.014)LS(0.979)PVRS(0.999)PK;EGPTDHLESACPLNLPLQNNHTAADMY(0.033)LS(0.967)PVRS(0.999)PK;EGPTDHLESACPLNLPLQNNHT(0.085)AADMY(0.264)LS(0.812)PVRS(0.839)PK;EGPTDHLESACPLNLPLQNNHT(0.202)AADMY(0.257)LS(0.649)PVRS(0.891)PK 270.21 1.4652e-41 41117200000.0 2085254.0 2493699.0 1957218.0 3551631.0 2177673.0 2187740.0 2159818.0 2204355.0 2525942.0 1984174.0 True False 1969580.8037692069 2373897.9569214913 2083383.4039395214 3889176.9424032 2349043.475835543 2174085.50315905 2378153.4812323735 2196708.607005323 2067294.6066160253 1966595.762024015 1.0015178725607137 1.207110277954775 1.0593856877812595 1.9776188973378392 1.1944719505639094 1.1055070620723229 1.2092741818912416 1.1170107499593491 1.0512046484267674 1.0 20.907269008355268 -5.99152179441631 24.998199849424413 1.1152917881563924 1.3234677028812207 0.1351731061192164 0.2532142538274201 436.2937899645861 1286412.7201546498 0.08164559022051895 0.09243337397764144 1.0197135859658704e-06 5.99152179441631 0.20817591472482833 EGPVAS(ph)PPFMDLEQAVLPAVIPK ddPTM_KYSE-520_SHP099_60min_R1 3 EGPVASPPFMDLEQAVLPAVIPK 23 0 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;Q9H4A3-4 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 1 EGPVAS(1)PPFMDLEQAVLPAVIPK;EGPVAS(1)PPFMDLEQAVLPAVIPK;EGPVAS(1)PPFMDLEQAVLPAVIPK 108.44 0.00048256 191167000.0 106172.0 180268.0 117952.0 94750.0 113606.0 131263.0 102739.0 122020.0 182248.0 123757.0 True False 100282.42751136527 171607.65469221552 125555.37464987265 103755.01151237366 122546.1458702812 130443.73892746241 113124.86075601398 121596.74109968217 149156.35729821096 122660.60926148907 0.8175601614498932 1.3990445321071305 1.0235997962655843 0.8458706681554771 0.9990668284472332 1.0634525599769458 0.9222590808664036 0.9913267334296463 1.2160086126772613 1.0 16.904312496485545 -4.974300214813889 24.99996545508926 0.9984433042728909 1.1340572573247791 0.055716279252699064 0.15845675659331507 473.545812448684 460645.4170610669 0.03932615087800966 0.08185998822324086 1.0609618923556914e-05 4.974300214813889 0.13561395305188828 EGPYSISVLYGDEEVPRS(ph)PFK ddPTM_KYSE-520_SHP099_60min_R1 5 EGPYSISVLYGDEEVPRSPFK 21 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 EGPYSISVLYGDEEVPRS(1)PFK;EGPYSISVLYGDEEVPRS(1)PFK;EGPYSISVLYGDEEVPRS(1)PFK;EGPYSISVLYGDEEVPRS(1)PFK;EGPYSISVLYGDEEVPRS(1)PFK 290.1 2.8181999999999995e-44 9953130000.0 4142570.0 3980870.0 3154580.0 3272830.0 3302920.0 3830180.0 3388100.0 4006780.0 5129090.0 3921230.0 True False 3912773.3840914397 3789623.0297923046 3357929.274306461 3583878.7791877794 3562841.012955909 3806274.4258868657 3730602.212669495 3992881.415369483 4197776.549836927 3886490.9528707787 1.0067625093019315 0.9750757368914182 0.8640002807226678 0.9221374300486991 0.9167243809802764 0.9793601662896808 0.959889591384193 1.0273744269030445 1.0800942548795116 1.0 21.890036727203977 -7.14464547291815 1.7977543757402246 1.045047706254169 0.9381801232864408 0.49622163676547937 0.041475308091132895 0.3143666177745156 1.9191587518119293 0.030289608136582394 0.013355038859502432 7.167282573660784e-08 7.14464547291815 -0.10686758296772814 EGQHYPER ddPTM_KYSE-520_SHP099_60min_R1 1 EGQHYPER 8 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 0 76.465 0.01339 0.0 46740.0 45849.0 44652.0 26072.0 49836.0 43568.0 35573.0 48520.0 37425.0 39206.0 False True 44147.23902611996 43646.345219247945 47530.33936572606 28549.875041167375 53757.80967194804 43296.07595127099 39169.06599902364 48351.695444653145 30629.563407475205 38858.66534180645 1.136097666705597 1.1232075223203979 1.2231593377601189 0.7347106440748424 1.383418838477507 1.1141935928687317 1.0079879392276305 1.2442963498448705 0.7882299388837245 1.0 15.245948729833904 -7.764915321551253 24.996337054256607 0.8941149779715961 1.1162631181181202 0.22714685574293225 0.1671426347694394 136.2839591222695 979976.5145376307 0.13402840938539742 0.04001289107702191 1.7182433764473473e-08 7.764915321551253 0.22214814014652406 EGQPSPADEKGNDS(ph)DGEGESDDPEK ddPTM_KYSE-520_SHP099_60min_R1 9 EGQPSPADEKGNDSDGEGESDDPEK 25 1 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 EGQPSPADEKGNDS(1)DGEGESDDPEK;EGQPSPADEKGNDS(0.996)DGEGES(0.004)DDPEK;EGQPSPADEKGNDS(1)DGEGESDDPEK;EGQPSPADEKGNDS(1)DGEGESDDPEK;EGQPSPADEKGNDS(1)DGEGESDDPEK;EGQPSPADEKGNDS(1)DGEGESDDPEK;EGQPSPADEKGNDS(1)DGEGESDDPEK;EGQPSPADEKGNDS(1)DGEGESDDPEK;EGQPSPADEKGNDS(1)DGEGESDDPEK 260.76 7.289099999999999e-38 19283740000.0 16615990.0 13908890.0 12722830.0 14010540.0 14666880.0 13998450.0 14222910.0 14982670.0 17617660.0 13989100.0 True False 15694267.911545126 13240686.046730462 13542963.979047747 15342097.509177549 15821080.012868255 13911080.481088622 15660700.545024963 14930698.614751475 14418737.049067179 13865167.457355125 1.1319205454831855 0.9549604133851705 0.9767616597997555 1.1065208953562944 1.1410666377834167 1.003311393380189 1.1294995601886764 1.0768494978999414 1.039925200572922 1.0 23.724961704926244 -5.265975201408532 24.986358804899094 1.0767602766647077 1.0145888269144898 0.11006998574914906 0.06260936094531197 658.9594407074919 3630003.5663025645 0.017085379219852252 0.02625812553232081 5.420318400060196e-06 5.265975201408532 -0.06217144975021793 EGQPSPADEKGNDS(ph)DGEGESDDPEKK ddPTM_KYSE-520_SHP099_60min_R1 6 EGQPSPADEKGNDSDGEGESDDPEKK 26 2 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 EGQPSPADEKGNDS(1)DGEGESDDPEKK;EGQPS(0.002)PADEKGNDS(0.998)DGEGESDDPEKK;EGQPSPADEKGNDS(1)DGEGESDDPEKK;EGQPSPADEKGNDS(1)DGEGESDDPEKK;EGQPSPADEKGNDS(1)DGEGESDDPEKK;EGQPS(0.002)PADEKGNDS(0.998)DGEGESDDPEKK 207.23 5.1007e-17 10640350000.0 4738700.0 4113810.0 3927600.0 3661630.0 3969220.0 3785180.0 3636740.0 3834760.0 4938390.0 3520330.0 True False 4475834.864635744 3916176.392645301 4180779.3803821956 4009630.214290794 4281575.032227498 3761555.2875787676 4004377.1703620483 3821458.112599708 4041702.862681136 3489142.6149752964 1.2827893148951819 1.1223893158844205 1.1982254214655528 1.149173495253986 1.2271137940453063 1.0780743875112138 1.1476679552092197 1.0952427384877086 1.1583656240745985 1.0 21.73444113667952 -13.999999955986155 0.05180793676809305 0.36129148009436124 1.4666062405468343 0.5703870624616088 0.04959264231206076 377.33085173954186 1.4394962754906813 32.66507896389073 6.911797245669392 1.0000001013456285e-14 13.999999955986155 1.1053147604524731 EGQPSPADEKGNDS(ph)DGEGESDDPEKKK ddPTM_KYSE-520_SHP099_60min_R1 5 EGQPSPADEKGNDSDGEGESDDPEKKK 27 3 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 EGQPSPADEKGNDS(1)DGEGESDDPEKKK;EGQPS(0.009)PADEKGNDS(0.99)DGEGES(0.001)DDPEKKK;EGQPSPADEKGNDS(1)DGEGESDDPEKKK;EGQPSPADEKGNDS(1)DGEGESDDPEKKK;EGQPSPADEKGNDS(1)DGEGESDDPEKKK 244.72 3.0581e-31 9234660000.0 3971900.0 3971140.0 3933350.0 2840740.0 3081950.0 2956870.0 2440190.0 2551690.0 4816480.0 2789220.0 True False 3751570.789213648 3780360.473597337 4186900.0345825213 3110723.075500376 3324481.9311032286 2938415.077534766 2686868.219159405 2542838.782958922 3941928.645580126 2764509.6807803256 1.3570474414669835 1.3674614706106842 1.5145181308971594 1.125235008988041 1.2025575291763284 1.0629064162674058 0.9719149250369039 0.919815474200534 1.4259051697252352 1.0 21.398592193062903 -5.343192291997898 5.907921451863511 1.0927193632677326 1.4075552983722628 0.5133886966241583 0.13904377241280902 0.18157660956546065 10.338928275502282 0.03950072473351431 0.05921097408555743 4.5374067000595686e-06 5.343192291997898 0.31483593510453023 EGRGES(ph)ENAGTNQETR ddPTM_KYSE-520_SHP099_60min_R1 2 EGRGESENAGTNQETR 16 1 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 EGRGES(1)ENAGTNQETR;EGRGES(1)ENAGTNQETR 107.18 0.00034085 969570000.0 482080.0 516000.0 506400.0 356480.0 445560.0 459320.0 371910.0 363700.0 652260.0 386250.0 True False 455338.061397345 491210.58546821016 539043.3542686482 390359.7520203801 480623.0371103858 456453.21350389655 409506.2922918187 362438.409588218 533826.0261365335 382828.12549795315 1.1894059790018734 1.283109972208237 1.408055778471089 1.0196736499248336 1.2554538318866426 1.1923189105037086 1.0696870606337103 0.946739242621702 1.3944273959552318 1.0 18.54633729962609 -5.669997249214909 0.9964051244235451 1.1133303475080623 1.279029195584764 0.1512905554830778 0.14244290309918362 1.0432786326750225 2.1904503590752813 0.06300169634559218 0.10965465804933412 2.1379756312189977e-06 5.669997249214909 0.16569884807670165 EGRPPEPT(ph)PAKR ddPTM_KYSE-520_SHP099_60min_R1 6 EGRPPEPTPAKR 12 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR;EGRPPEPT(1)PAKR 126.07 7.2971e-05 6226450000.0 4902290.0 5112050.0 5342270.0 4493190.0 4243990.0 4087360.0 4351350.0 4557820.0 5114450.0 6138600.0 True False 4630350.201227167 4866459.444656517 5686641.272134223 4920221.426673168 4577967.868000055 4061849.2701107864 4791226.923083561 4542009.98622318 4185794.8047925555 6084216.779758531 0.7610429359834439 0.7998497786677575 0.9346546117575898 0.808686081508825 0.7524333917934042 0.6676042976680381 0.787484584543964 0.7465233653958402 0.6879759476549553 1.0 22.536640126316723 -4.244341362048674 20.30703598057497 0.7891569458900363 0.7610426685481639 0.005183345286646879 0.09710909765527845 2192.7174604517777 2603645.636792212 0.0242018656850266 0.49045200819146106 5.697162905996886e-05 4.244341362048674 -0.02811427734187233 EGRPSGEAFVELES(ph)EDEVK ddPTM_KYSE-520_SHP099_60min_R1 5 EGRPSGEAFVELESEDEVK 19 1 P31943;G8JLB6;E9PCY7;D6RBM0;E7EN40;D6R9T0;D6RFM3;D6RIT2;D6RIU0;D6RDU3;D6RJ04;D6RIH9;D6RAM1;E7EQJ0;D6RDL0 P31943 HNRNPH1 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed 1 EGRPSGEAFVELES(1)EDEVK;EGRPSGEAFVELES(1)EDEVK;EGRPSGEAFVELES(1)EDEVK;EGRPSGEAFVELES(1)EDEVK;EGRPSGEAFVELES(1)EDEVK 155.87 7.377200000000001e-08 1929700000.0 2115890.0 2135080.0 1951930.0 1894470.0 2073840.0 2056890.0 2015730.0 2134690.0 2431780.0 2238920.0 True False 1998517.363777858 2032507.551979584 2077754.5309984249 2074519.8592068243 2237039.409464499 2044052.1865453955 2219499.660029011 2127285.258630393 1990230.052185173 2219084.910653401 0.9006042779991695 0.9159214873761273 0.9363114142336437 0.934853754017006 1.0080909471849868 0.92112391767088 1.0001869010841444 0.958631753304123 0.8968697153635087 1.0 21.081533440930702 -4.966850737019101 1.4544035879397033 0.9612387057430961 0.9024783484762694 0.2844333962606168 0.033907667640224154 0.6263344156337819 2.4213096233388085 0.010352879396898709 0.036637070203791124 1.0793176099316525e-05 4.966850737019101 -0.05876035726682671 EGRPYCR ddPTM_KYSE-520_SHP099_60min_R1 2 EGRPYCR 7 1 O43294-2;O43294 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 0 ; 84.244 0.010506 588480000.0 317270.0 303310.0 282060.0 249640.0 301150.0 307250.0 267140.0 278800.0 350800.0 242809.0 False True 299670.40063793544 288738.5323224085 300242.03891195677 273365.71054299746 324848.791690889 305332.338781399 294145.1182351548 277832.90787240927 287103.56294835836 240657.90116254368 1.2452132225466968 1.1997882925414134 1.2475885373452549 1.1359099752073483 1.3498363865123282 1.2687401382062802 1.2222541492061176 1.1544724130406052 1.1929945435468774 1.0 17.87662426437535 -8.380024147835687 0.8521142716323766 1.0000728421669334 1.2379465523597786 0.6246917320885984 0.05416840656005513 0.851338292665973 1.103275094260523 0.05486168613354807 0.018543422644582357 4.168462051571425e-09 8.380024147835687 0.2378737101928452 EGS(ph)FESR ddPTM_KYSE-520_SHP099_60min_R1 1 EGSFESR 7 0 V9GY71;V9GYH5;P19174;P19174-2 V9GY71 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 1 EGS(1)FESR 78.264 0.025111 440550000.0 1413900.0 1378400.0 1323800.0 1496000.0 1475100.0 1387000.0 1257900.0 1590400.0 1785000.0 1389900.0 True False 1335468.1484602278 1312179.5949794175 1409134.266154888 1638179.3902111999 1591181.9778290929 1378343.2185184734 1385060.8079209449 1584883.27360215 1460888.9961881964 1377586.5673258363 0.9694259367326958 0.9525206082160147 1.0229007015437819 1.1891662049167806 1.155050445154882 1.000549258544315 1.0054256050199573 1.1504781704417435 1.0604698324142825 1.0 20.393711549701415 -5.002823963926316 8.107883462452245 1.0849003288570016 0.9671253964825354 0.35343369679633885 0.0644608991704148 0.12332342600907673 79.18493467776321 0.018098401385081484 0.035166702603021655 9.935186777275679e-06 5.002823963926316 -0.11777493237446623 EGS(ph)GNPTPLINPLAGR ddPTM_KYSE-520_SHP099_60min_R1 1 EGSGNPTPLINPLAGR 16 0 F8VUB4;F8VV52;F8VP97;Q9NZN8-4;Q9NZN8;F8VQF4;F8VRS8;F8W145;Q9NZN8-2 F8VUB4 CNOT2 CCR4-NOT transcription complex subunit 2 1 EGS(1)GNPTPLINPLAGR 85.36200000000001 0.0025174 52759000.0 69287.0 62755.0 65499.0 44577.0 73633.0 64173.0 72195.0 81826.0 73941.0 69698.0 True False 65443.51198978978 59740.15560282458 69721.17034210527 48813.584677436236 79427.4981855396 63772.47250323433 79493.17515530078 81542.16470433195 60515.178300925174 69080.52994422353 0.9473510414964923 0.8647900595299359 1.009273819966335 0.7066185612190429 1.1497812516735229 0.9231613097746212 1.1507319822167628 1.1803928656912461 0.8760091787047071 1.0 16.07599152994626 -5.782183873598568 24.999592104983762 1.05472577811912 0.8898687570481163 0.31823540889274204 0.11749901443028579 282.6802420705998 340661.85794740485 0.035082591197797226 0.03982247140582324 1.6512625310721197e-06 5.782183873598568 -0.16485702107100364 EGS(ph)LPRPSAGLPSR ddPTM_KYSE-520_SHP099_60min_R1 1 EGSLPRPSAGLPSR 14 1 H0YJL1;A0A3B3ISJ2;Q96KQ4 H0YJL1 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 EGS(0.999)LPRPS(0.001)AGLPSR 57.52 0.032298 547070000.0 207540.0 167430.0 169750.0 157220.0 180750.0 158920.0 170080.0 203600.0 201060.0 181200.0 True False 196027.3424792669 159386.41148244642 180692.3566096029 172162.1415300833 194973.99667318037 157928.12133161904 187273.34622083974 202893.75912059707 164552.5723101394 179594.70897146658 1.0914984277761273 0.8874783249197459 1.0061118038745267 0.9586147749900352 1.0856333006121979 0.8793584300788624 1.042755364527989 1.1297312726113338 0.9162439876571362 1.0 17.45438532199322 EGS(ph)PANWK ddPTM_KYSE-520_SHP099_60min_R1 8 EGSPANWK 8 0 O96019-2;O96019 O96019-2 ACTL6A Actin-like protein 6A 1 EGS(1)PANWK;EGS(1)PANWK;EGS(1)PANWK;EGS(1)PANWK;EGS(1)PANWK;EGS(1)PANWK;EGS(1)PANWK;EGS(1)PANWK 147.3 0.00047663 37482200000.0 20536400.0 18278500.0 16722360.0 16154810.0 17339510.0 17044300.0 16819200.0 17472900.0 20122100.0 16840500.0 True False 19397204.953701556 17400373.423412137 17800310.08232201 17690158.28527925 18704030.78868369 16937920.201437954 18519448.87557357 17412290.5881055 16468433.876861887 16691306.27171075 1.1621142550464667 1.0424812258644578 1.0664420023548937 1.0598426508571954 1.1205852007151893 1.014774992784428 1.1095266346505934 1.043195200223287 0.9866473964816883 1.0 23.992593529515652 -1.000000000003137 0.07250542695282937 0.9173334790646273 1.4101392261868635 0.3897880567352906 0.04148571031043424 271.1146107267015 1.4502833250646263 1.6597243086567737 13.5608010841378 0.09999999999927767 1.000000000003137 0.49280574712223624 EGS(ph)PANWKR ddPTM_KYSE-520_SHP099_60min_R1 5 EGSPANWKR 9 1 O96019-2;O96019 O96019-2 ACTL6A Actin-like protein 6A 1 EGS(1)PANWKR;EGS(1)PANWKR;EGS(1)PANWKR;EGS(1)PANWKR;EGS(1)PANWKR 101.39 0.0014921 4518530000.0 4317840.0 4106230.0 4011060.0 3355640.0 3619660.0 3692930.0 3283220.0 3422520.0 4625920.0 3267740.0 True False 4078320.807799354 3908960.547223113 4269619.345522916 3674559.0166900456 3904506.648951827 3669881.054047172 3615119.9187393333 3410648.0769421733 3785969.5379534434 3238790.36586325 1.2592111088092421 1.2069199008442892 1.3182759188506212 1.134546729365316 1.2055447274714677 1.133102374493763 1.116194477062358 1.0530623139090132 1.1689455353015263 1.0 21.62702366051467 -5.893685476367622 0.21078584866752034 0.9794565442307184 1.3800922898000962 0.6776713005742626 0.05064486241357725 3.460928640748642 0.29635717688991275 0.12921085810617952 0.4006908331178492 1.2773635628626575e-06 5.893685476367622 0.40063574556937787 EGS(ph)PEPWLPLTDGR ddPTM_KYSE-520_SHP099_60min_R1 5 EGSPEPWLPLTDGR 14 0 J3KSM5;Q494U1-3;Q494U1;Q494U1-2 J3KSM5 PLEKHN1 Pleckstrin homology domain-containing family N member 1 1 EGS(0.999)PEPWLPLT(0.001)DGR;EGS(1)PEPWLPLTDGR;EGS(1)PEPWLPLTDGR;EGS(1)PEPWLPLTDGR;EGS(1)PEPWLPLTDGR 248.99 9.4778e-19 791598000.0 576900.0 644610.0 507482.0 563677.0 637258.0 592328.0 542207.0 692692.0 796931.0 616841.0 True False 544898.2069783614 613641.9680206642 540195.1017199088 617248.6926043308 687406.5790979662 588631.0612390839 597018.5749903747 690289.2131275282 652228.4193956606 611376.2686350368 0.8912648968120813 1.0037059001172646 0.8835722441859779 1.0096052533776048 1.124359276542865 0.9627967120039939 0.9765157818822161 1.1290742682385646 1.0668199811743277 1.0 19.221701027664285 -5.47396200538977 7.363917934154087 1.0445563407935106 0.9354606357782422 0.42587756472862326 0.06051382980527956 0.27293331306019625 35.728230425610825 0.017416174951954327 0.02561415516969873 3.357669878093591e-06 5.47396200538977 -0.10909570501526833 EGS(ph)PIPHDPEFGSK ddPTM_KYSE-520_SHP099_60min_R1 12 EGSPIPHDPEFGSK 14 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(0.988)PIPHDPEFGS(0.012)K;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK;EGS(1)PIPHDPEFGSK 194.55 7.0941e-11 30750830000.0 23647170.0 23376250.0 21121040.0 24680800.0 21244670.0 19811720.0 19771800.0 20665540.0 25979210.0 19596150.0 True False 22335414.34063532 22253219.861533392 22482536.033258867 27026455.811446898 22916504.663362697 19688067.706695605 21770526.49817266 20593856.065113306 21262040.34658955 19422543.35657398 1.1499737151095308 1.1457418038920895 1.1575485053891856 1.3914993168131715 1.1798920585550454 1.0136709361511993 1.1208895816831297 1.0603068654313428 1.094709377461266 1.0 24.211228796362143 -6.13229158037464 5.842097495497287 1.0663424148773482 1.2120562724375041 0.4981989738348903 0.07391438024876532 0.22097523295332439 9.590321784459347 0.02570884618741711 0.025781859983624037 7.374089758959818e-07 6.13229158037464 0.14571385756015598 EGS(ph)PYKAPIYIPDDIPIPAEFELR ddPTM_KYSE-520_SHP099_60min_R1 6 EGSPYKAPIYIPDDIPIPAEFELR 24 1 Q03112-8;Q03112;Q03112-3;C9JU02;Q03112-9 Q03112-8 MECOM MDS1 and EVI1 complex locus protein EVI1 1 EGS(0.941)PY(0.059)KAPIYIPDDIPIPAEFELR;EGS(0.796)PY(0.204)KAPIYIPDDIPIPAEFELR;EGS(1)PYKAPIYIPDDIPIPAEFELR;EGS(0.932)PY(0.068)KAPIYIPDDIPIPAEFELR;EGS(1)PYKAPIYIPDDIPIPAEFELR;EGS(1)PYKAPIYIPDDIPIPAEFELR 174.14 9.2445e-11 1227187000.0 1066759.0 1300296.0 1036869.9 926148.2 914717.1 1040472.0 958008.0 1016583.0 1484102.0 1030225.0 True False 1007583.751738654 1237827.8283759123 1103708.1928044986 1014169.0464713892 986700.1317416386 1033978.028304508 1054852.7978970758 1013056.7108452566 1214626.4879668863 1021098.008002921 0.9867649763701934 1.2122517316402122 1.0809032866131507 0.9932142052210213 0.9663128553853922 1.0126138923008752 1.0330573457489873 0.9921248527617915 1.1895297791663224 1.0 19.96168991631734 -5.010984888769019 24.4243414924074 1.0245686543968402 1.1112756268100694 0.13509737940890665 0.07691507093378964 626.9182558075651 1393934.402601596 0.019854062391044727 0.037378973753175386 9.750235629698558e-06 5.010984888769019 0.08670697241322922 EGS(ph)QGELTPANSQSR ddPTM_KYSE-520_SHP099_60min_R1 4 EGSQGELTPANSQSR 15 0 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QQX0 C9JFE4 GPS1 COP9 signalosome complex subunit 1 1 EGS(1)QGELTPANSQSR;EGS(1)QGELTPANSQSR;EGS(1)QGELTPANSQSR;EGS(1)QGELTPANSQSR 208.07 5.1173e-13 1639260000.0 1544110.0 1450970.0 1282310.0 1214480.0 1264230.0 1545750.0 1301170.0 1486460.0 1788020.0 1422440.0 True False 1458455.1401930293 1381263.2232496275 1364969.7543685408 1329903.8140532742 1363717.7085152692 1536102.400883152 1432704.961795451 1481303.817202371 1463360.6403161997 1409838.2882415727 1.0344839917861035 0.9797316719014735 0.9681746947524071 0.9433023809503733 0.96728661711704 1.089559287540036 1.016219359159552 1.050690585974888 1.0379634689460613 1.0 20.427098260932997 -6.236059978176525 24.88758989965456 1.0406380073640167 0.9761192610665053 0.49062886633275604 0.030637868408229067 592.8433568282263 581355.3713804671 0.010097953314899428 0.010094516800625206 5.806842166737327e-07 6.236059978176525 -0.06451874629751142 EGSCIFPEELS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 EGSCIFPEELSPK 13 0 H3BN63;Q86YC2 H3BN63 PALB2 Partner and localizer of BRCA2 1 EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK;EGSCIFPEELS(1)PK 236.37 9.1527e-16 1807480000.0 3439290.0 3382920.0 2870900.0 2778150.0 2905740.0 3044960.0 2641060.0 3088800.0 4061700.0 3221220.0 True False 3248505.7276453613 3220399.445333555 3055962.8076024144 3042184.5407187417 3134405.206600979 3025955.2751694364 2908044.119061685 3078085.673731343 3324197.667124704 3192682.4968712386 1.0174847423221158 1.0086813983192748 0.957177173300882 0.9528615963848639 0.9817466063952898 0.9477783268880663 0.9108466381832541 0.96410641419803 1.0411926868338295 1.0 21.606337657476477 -7.749035451878038 24.962422055203376 1.0205963397331885 0.9660380063839905 0.32744431682369823 0.030324531756709277 235.65088190239027 474244.55561515514 0.022662027058699102 0.008438572888818463 1.782233276086103e-08 7.749035451878038 -0.05455833334919802 EGSEFSFS(ph)DGEVAEK ddPTM_KYSE-520_SHP099_60min_R1 5 EGSEFSFSDGEVAEK 15 0 Q9BVS4-2;Q9BVS4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 EGSEFS(0.002)FS(0.998)DGEVAEK;EGSEFSFS(1)DGEVAEK;EGSEFSFS(1)DGEVAEK;EGSEFS(0.003)FS(0.997)DGEVAEK;EGSEFSFS(1)DGEVAEK 373.42 5.935399999999999e-68 1776610000.0 2242220.0 2276400.0 1850910.0 2015800.0 2129890.0 2035430.0 2033350.0 2002050.0 2388760.0 2115790.0 True False 2117839.5868452443 2167038.3270539376 1970222.6201607084 2207381.02592763 2297500.2255836218 2022726.1263655792 2238900.8615836375 1995105.3558319807 1955021.399739224 2097045.7466597126 1.0099157780504566 1.0333767541817878 0.9395229566636708 1.0526146267641825 1.0955889871468965 0.964559847865735 1.067645217158414 0.9513885708072377 0.9322740826485485 1.0 20.999926903223738 -7.287086522189976 24.35614248595015 0.9563734707149462 1.0221282965299694 0.27327842616562703 0.04617361465978651 734.8773536367735 697880.4146877347 0.02500510050486463 0.012019307965636258 5.163134966210489e-08 7.287086522189976 0.06575482581502323 EGSRLEMK ddPTM_KYSE-520_SHP099_60min_R1 1 EGSRLEMK 8 1 A0A0A0MTS7;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12;A0A0A0MRA3;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9;Q8WZ42-6 A0A0A0MTS7 TTN Titin 0 83.265 0.007989699999999999 314980000.0 414810.0 434460.0 293800.0 413510.0 402870.0 419830.0 304770.0 300790.0 365290.0 393640.0 False True 391799.6623967659 413587.8894622452 312738.818096621 452809.86607368547 434573.5769832588 417209.6852419687 335579.12586856406 299746.6296949138 298962.54421153286 390152.655847286 1.0042214413378865 1.0600668309281798 0.801580646471451 1.160596651816526 1.1138552319719697 1.0693498531643302 0.8601226233864645 0.7682803774434409 0.7662706884880289 1.0 18.57367919518645 -6.835578793153238 5.302976181620386 0.8245119485600098 1.034625833265923 0.41125444316643034 0.10818473959895519 0.19555646366474042 9.80726531387247 0.04682414539439916 0.03151190747406391 1.4602297989231894e-07 6.835578793153238 0.2101138847059133 EGSSRPVWS(ph)DDDWLKK ddPTM_KYSE-520_SHP099_60min_R1 2 EGSSRPVWSDDDWLKK 16 2 E9PKY5;Q9UNP9-2;Q9UNP9;Q9UNP9-3;E9PIB0;E9PK21 E9PKY5 PPIE Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase E 1 EGSSRPVWS(1)DDDWLKK;EGSS(0.001)RPVWS(0.999)DDDWLKK 118.54 9.8732e-05 608370000.0 762750.0 697230.0 715190.0 671290.0 687640.0 629240.0 644760.0 638600.0 885730.0 661410.0 True False 720438.7369955716 663734.0242364333 761292.2917444592 735089.1997693022 741753.3558636005 625312.6797552737 709938.6330512039 636384.8456503599 724903.759436286 655550.421969193 1.0989829505890059 1.0124835588430525 1.1613024204265334 1.1213312891496345 1.131497030595243 0.9538742693154115 1.0829657174479963 0.9707641461639791 1.1057940551067973 1.0 19.322347224719515 -6.2400314841660185 24.788706307325725 1.024620267139777 1.103994947509833 0.3519027790581787 0.05589770217245936 861.4929274862757 997542.9878627509 0.017937598554751893 0.017918102681530518 5.753982223474738e-07 6.2400314841660185 0.0793746803700559 EGSTQQLQT(ph)TSPKPLVQQPILPVVK ddPTM_KYSE-520_SHP099_60min_R1 1 EGSTQQLQTTSPKPLVQQPILPVVK 25 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 EGS(0.037)T(0.034)QQLQT(0.345)T(0.345)S(0.239)PKPLVQQPILPVVK 71.756 0.022475 151000000.0 267930.0 347640.0 258750.0 246960.0 269240.0 330090.0 275370.0 357910.0 373950.0 355260.0 True False 253067.38879478656 330938.85258172196 275429.43901463796 270431.0041487685 290427.65623395296 328029.7858693313 303207.0869522151 356668.4937468219 306050.1065123676 352112.67278809764 0.7187113908481312 0.9398663500557444 0.7822196140619799 0.7680240589111503 0.8248145513601923 0.9316046005158709 0.8611081349369267 1.0129385316428698 0.8691823105627027 1.0 18.425677626203406 -6.232257989772276 4.04251891072281 0.9321928897119858 0.8089821967560751 0.4627719884364223 0.069191767537537 0.21660061243153234 8.091301879446576 0.023270236881307808 0.022336297147954334 5.857900764036499e-07 6.232257989772276 -0.1232106929559107 EGSTQQLQTT(ph)SPKPLVQQPILPVVK ddPTM_KYSE-520_SHP099_60min_R1 1 EGSTQQLQTTSPKPLVQQPILPVVK 25 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 EGSTQQLQT(0.096)T(0.538)S(0.366)PKPLVQQPILPVVK 167.87 7.8775e-10 2174300000.0 693160.0 980930.0 699270.0 594390.0 650130.0 946950.0 660840.0 903720.0 1080200.0 1004600.0 True False 654709.0330197981 933804.6503940519 744346.0630715591 650880.6468901302 701291.5322663055 941039.7337967335 727644.1563768807 900585.2062498339 884062.9096260439 995700.0255669731 0.657536422826737 0.9378373269221555 0.7475605543423707 0.6536915036428815 0.7043200906487623 0.9451036553513044 0.7307865197277106 0.9044744231446827 0.8878807742549161 1.0 19.925351641618818 -7.648753334441882 0.6854574585211356 0.9976288833966848 0.7571162943733591 0.39632122725073615 0.09649008272344003 0.7311595806910506 0.7584658863964774 0.0944197352488128 0.04160011241564623 2.2451567398853868e-08 7.648753334441882 -0.24051258902332562 EGSTQQLQTTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 EGSTQQLQTTSPK 13 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 EGSTQQLQTT(0.003)S(0.997)PK;EGSTQQLQT(0.003)T(0.034)S(0.963)PK;EGSTQQLQTT(0.003)S(0.997)PK;EGSTQQLQTTS(1)PK;EGSTQQLQTT(0.016)S(0.984)PK;EGSTQQLQTT(0.028)S(0.972)PK 257.12 5.385100000000001e-22 3310710000.0 8380060.0 8495050.0 6911420.0 5768340.0 6176360.0 8011360.0 6845550.0 8294760.0 10086330.0 8198760.0 True False 7915201.366564545 8086935.046669985 7356941.191862983 6316561.299285347 6662404.393318753 7961358.130576892 7537565.000129768 8265987.413571539 8254906.7276879 8126125.364938754 0.9740437183895454 0.9951772441958796 0.9053442891252308 0.7773152659616831 0.819874675089875 0.9797237641603744 0.9275718330228564 1.0172114067100464 1.0158478188516251 1.0 22.954136191089866 -6.960121301839308 1.6557455085622803 1.0127656139245267 0.8987737834598246 0.3365759125914124 0.06482034543950549 0.5065646314416541 2.7388995034258308 0.04678614574225396 0.02386377989524272 1.0961719839885719e-07 6.960121301839308 -0.11399183046470207 EGSVLDILKS(ph)PGFAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 EGSVLDILKSPGFASPK 17 1 P49790-3;P49790 P49790-3 NUP153 Nuclear pore complex protein Nup153 2 EGS(0.054)VLDILKS(0.946)PGFAS(1)PK;EGSVLDILKS(1)PGFAS(1)PK;EGSVLDILKS(1)PGFAS(1)PK;EGS(0.032)VLDILKS(0.968)PGFAS(1)PK 103.03 0.00044969 1205252000.0 3655500.0 3715450.0 4014630.0 3144350.0 3197260.0 3039800.0 2716360.0 2970880.0 4604220.0 3089530.0 True False 3452722.1279414096 3536954.204995849 4273419.473435117 3443188.0786167015 3448866.172079069 3020827.4806434405 2990956.1779188635 2960574.7106886026 3768209.710940958 3062159.1678179656 1.1275449572406622 1.1550523702908013 1.3955575916324008 1.1244314517688019 1.1262857294699882 0.9865024367090698 0.9767474562892039 0.9668258729993614 1.2305727770598254 1.0 21.546117843884137 -5.829888666346353 2.2625654231144106 1.0291795877741314 1.218806771292273 0.3889733708783205 0.10025286380525107 0.3048082452881498 3.1965292447212343 0.03452909942491096 0.042200067145436594 1.47948761391767e-06 5.829888666346353 0.18962718351814156 EGSVLDILKS(ph)PGFASPK ddPTM_KYSE-520_SHP099_60min_R1 2 EGSVLDILKSPGFASPK 17 1 P49790-3;P49790 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 EGSVLDILKS(1)PGFASPK;EGSVLDILKS(1)PGFASPK 171.39 1.6221e-08 2514000000.0 2008000.0 2035180.0 1952960.0 1305710.0 1652100.0 2514700.0 1929780.0 2865200.0 4468900.0 3011400.0 True False 1896612.2371512395 1937406.8979325404 2078850.926446481 1429804.285823974 1782110.8708368517 2499004.8245193963 2124860.995237844 2855261.2899427097 3657460.4118013615 2984721.3388337465 0.6354403047529804 0.6491081337226493 0.6964974918759999 0.47904113098298734 0.5970778067788385 0.8372657078586305 0.7119126893327049 0.9566257502143828 1.2253942651914305 1.0 21.509164813427653 -7.208626220997563 1.3644031067726166 1.1182563693976562 0.6280624299103046 0.785429193171377 0.09879841655774593 0.20186082520243748 0.675429645100022 0.08119376516354716 0.0322983867640825 6.185485298300204e-08 7.208626220997563 -0.49019393948735157 EGTAPS(ph)ENGETK ddPTM_KYSE-520_SHP099_60min_R1 3 EGTAPSENGETK 12 0 Q15651;A0A087WZE9 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGTAPS(0.871)ENGET(0.129)K;EGT(0.001)APS(0.999)ENGETK;EGTAPS(0.999)ENGET(0.001)K 164.53 1.2062e-05 1201330000.0 3925120.0 4013830.0 3480600.0 3149620.0 3234500.0 3719440.0 3568560.0 4433930.0 4556730.0 4197500.0 True False 3707385.7690672684 3820999.5819183434 3704965.0451569054 3448958.9378322135 3489036.7482124595 3696225.595303781 3929304.870589376 4418549.7317170445 3729342.697815486 4160313.4156055814 0.891131364084409 0.9184403193243923 0.8905495031358365 0.8290142095773277 0.8386475728306614 0.888448832109384 0.9444732831546588 1.062071361052464 0.8964090743323572 1.0 21.988260786658742 -6.857264648631417 3.423721604078078 0.9871860183446326 0.8741248961774336 0.552873294900085 0.04493997391905028 0.17825855250887254 4.092144281801415 0.02027546817839899 0.013237702851463574 1.3891058854671438e-07 6.857264648631417 -0.11306112216719899 EGTAPS(ph)ENGETKAEEAQK ddPTM_KYSE-520_SHP099_60min_R1 2 EGTAPSENGETKAEEAQK 18 1 Q15651 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 EGTAPS(0.998)ENGET(0.002)KAEEAQK;EGTAPS(0.949)ENGET(0.051)KAEEAQK 85.006 0.0029484000000000003 369630000.0 1931930.0 1891188.0 1848797.0 1545658.0 1750993.0 1694571.0 1670477.0 1966656.0 2474476.0 1933309.0 True False 1824761.991693027 1800332.489748938 1967973.4127997896 1692556.8716009753 1888786.1873126542 1683994.553819803 1839345.1174444386 1959834.129356963 2025173.5348637423 1916181.3863516417 0.952290845057902 0.9395417900268425 1.0270287702495422 0.883296792076432 0.98570323288071 0.8788283644828029 0.9599013593105101 1.0227811121203065 1.0568798701878734 1.0 20.869802702842946 -7.243910520811108 4.250889483078575 1.0313654309307585 0.9452494110250426 0.4241876083176158 0.04285968805830817 0.1896138879367229 8.458308125790175 0.022031944571072146 0.011279777379783133 5.702817572933288e-08 7.243910520811108 -0.08611601990571593 EGTGQQERES(ph)PRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR ddPTM_KYSE-520_SHP099_60min_R1 1 EGTGQQERESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 48 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 2 EGT(0.012)GQQERES(0.988)PRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR 153.14 1.633e-09 420360000.0 46987.0 62628.0 53058.0 49511.0 45498.0 43491.0 44806.0 39224.0 73952.0 48135.0 True False 44380.537443737674 59619.25687345551 56478.2035758016 54216.51055397507 49078.433751791716 43219.55653683267 49335.42774441998 39087.9410989504 60524.18097821262 47708.56134846333 0.9302426270954228 1.2496553068954743 1.1838169498192328 1.1364105104318214 1.0287133454585402 0.9059077724259391 1.034100093357962 0.8193066400273964 1.2686230577389246 1.0 15.54196056206259 -5.827919101953017 4.236967652589804 0.9936260086974505 1.1387838230371097 0.15100190483077292 0.13168101242123226 0.3367942330774053 11.881062849471988 0.039707415009909715 0.046511164044753334 1.486212460190708e-06 5.827919101953017 0.14515781433965913 EGVHGGLINK ddPTM_KYSE-520_SHP099_60min_R1 6 EGVHGGLINK 10 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 0 ;;;;; 156.83 0.00016609 6855950000.0 15671250.0 13793020.0 9643390.0 10283860.0 14759230.0 14797490.0 11582360.0 14844670.0 11768260.0 12980780.0 False True 14801934.522637628 13130382.615454897 10265018.349369546 11261234.962444756 15920697.432468615 14705133.376059776 12753217.981740402 14793177.304542033 9631440.63769283 12865780.388094025 1.150488666535558 1.02056635659705 0.7978543111826143 0.8752858064378192 1.2374451414701286 1.1429647431000678 0.9912510238043711 1.1498080068451673 0.7486091280250479 1.0 23.617035632195595 -2.998423649077042 2.2394803373572194 1.0038621095152 28.185067936472986 0.0860912284933727 0.1483214151975354 882.6937414736947 29.322255045790524 0.04074692938140655 121229.61719292233 0.001003636277409904 2.998423649077042 27.181205826957786 EGVIIEILASR ddPTM_KYSE-520_SHP099_60min_R1 1 EGVIIEILASR 11 0 A0A087WUP0;A0A087WTN9;A0A075B752;P13928-3;Q5VT79;P13928;P13928-2 A0A087WUP0 ANXA8L1;ANXA8;ANXA8L2 Annexin;Annexin A8;Annexin A8-like protein 2 0 104.79 0.0072556 38278000.0 45146.0 54342.0 55966.0 54778.0 52251.0 40981.0 38251.0 42340.0 61629.0 40345.0 False True 42641.66138368023 51731.328750995046 59573.657908766065 59984.08465039375 56362.85643247768 40725.22237786989 42117.784373784976 42193.1324222303 50438.727140662355 39987.57468793503 1.0663727849577729 1.2936850797956325 1.48980422978092 1.5000680866122151 1.4095092506193772 1.018446922467579 1.0532717901116584 1.0551560766439962 1.2613599983066894 1.0 15.287264161527794 -6.259466598543563 24.99886436899709 1.0795707594494597 1.3645486566471619 0.5176863611642671 0.13206404242159114 155.08347998454596 1965208.5783226895 0.04784561505606792 0.045585234573345276 5.502162358467195e-07 6.259466598543563 0.28497789719770217 EGVKFDESEK ddPTM_KYSE-520_SHP099_60min_R1 1 EGVKFDESEK 10 1 P14625 P14625 HSP90B1 Endoplasmin 0 113.61 0.0033406 0.0 274420.0 275810.0 175810.0 156750.0 262400.0 260540.0 165420.0 205760.0 255910.0 221360.0 False True 259197.37555729222 262559.6736007499 187142.99390594586 171647.47287139387 283049.3871482297 258913.87321759417 182142.2679436229 205046.26658474517 209443.1949661186 219398.92261547426 1.1813976680804856 1.196722711628446 0.8529804598627806 0.7823533079614472 1.290112931157421 1.1801054906334936 0.8301876133769872 0.9345819210977439 0.9546227140467577 1.0 17.743196915669582 -6.764848325435883 24.99933899995983 0.9243965698976707 1.0715085023192217 0.18711646605441845 0.15307164773427095 179.01367444951848 1312764.789282584 0.06822469135457301 0.048105903054763276 1.7185084604303353e-07 6.764848325435883 0.14711193242155096 EGVNQPAAVVMEDSS(ph)PHEALR ddPTM_KYSE-520_SHP099_60min_R1 1 EGVNQPAAVVMEDSSPHEALR 21 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 EGVNQPAAVVMEDS(0.116)S(0.884)PHEALR 167.55 2.6037e-09 426080000.0 332260.0 385700.0 272150.0 258130.0 255000.0 292860.0 253540.0 241750.0 354250.0 282550.0 True False 313828.875456111 367170.3930524971 289693.2244553961 282662.5975903857 275067.0492484699 291032.1521090986 279170.29751194577 240911.4256748739 289927.1299157805 280046.8268205735 1.1206299997006635 1.3111035651467813 1.0344456594789524 1.0093404763750033 0.9822180539281948 1.0392267443743024 0.996870061630124 0.8602540811120359 1.035280896439285 1.0 18.095308555797754 -4.896467210654052 5.770527087181189 0.9880030205668802 1.2137980570716256 0.664044852939137 0.06351715035947844 0.10951854868929818 5.205461497254701 0.016364130371146084 0.03502713115444644 1.2692079663582805e-05 4.896467210654052 0.22579503650474542 EGVQGPLNVS(ph)LSEEGK ddPTM_KYSE-520_SHP099_60min_R1 1 EGVQGPLNVSLSEEGK 16 0 P12270 P12270 TPR Nucleoprotein TPR 1 EGVQGPLNVS(0.986)LS(0.014)EEGK 67.902 0.023455 663570000.0 745900.0 795050.0 658320.0 604660.0 602310.0 776730.0 659040.0 707080.0 842360.0 827450.0 True False 704523.4400852135 756854.6046056194 700756.3605492424 662126.7046023421 649708.3703248865 771882.1399566361 725662.194810574 704627.3045137121 689408.6581675565 820119.4367463579 0.8590498024047011 0.9228590016208765 0.8544564720101475 0.8073539961803405 0.7922118916025944 0.9411825953289285 0.8848250173041597 0.8591764478954 0.8406198259397832 1.0 19.645474503989437 -6.270254641001144 24.930342132944173 0.8950883156511927 0.8495812746884163 0.2190230244523219 0.052962624657498805 1316.1295247868113 3722119.0722995806 0.01929735747825345 0.017259419140425468 5.367170094290802e-07 6.270254641001144 -0.04550704096277647 EGVT(ph)PWAS(ph)FKK ddPTM_KYSE-520_SHP099_60min_R1 1 EGVTPWASFKK 11 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 2 EGVT(1)PWAS(1)FKK 71.08 0.026063 494860000.0 541490.0 594180.0 682020.0 673460.0 523600.0 539280.0 523610.0 637290.0 709250.0 743320.0 True False 511452.47026644665 565634.7009176369 725984.100470583 737465.4359168672 564804.3411235248 535914.1534842411 576541.608741145 635079.3897346044 580468.078737522 736734.7630942094 0.6942151991286518 0.7677589401944738 0.9854076892225436 1.0009917718821753 0.7666318591393806 0.7274180347258997 0.7825633289241439 0.8620190352730703 0.7878928860362397 1.0 19.490785792750817 -10.133919441644801 4.403782039926981 1.000026035676144 0.8240437321417462 0.23581061601113396 0.09719806630973309 22958302.92033414 52831316.151748106 3441.098030055654 0.02577241672596405 7.346501275843082e-11 10.133919441644801 -0.1759823035343977 EGVTPWAS(ph)FK ddPTM_KYSE-520_SHP099_60min_R1 6 EGVTPWASFK 10 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 EGVT(0.015)PWAS(0.985)FK;EGVTPWAS(1)FK;EGVTPWAS(1)FK;EGVTPWAS(1)FK;EGVTPWAS(1)FK;EGVTPWAS(1)FK 156.36 0.00010209999999999999 16127450000.0 13276200.0 15005800.0 15104100.0 17570900.0 15601500.0 13544400.0 15741200.0 17137000.0 15723500.0 17683100.0 True False 12539742.72055145 14284898.843834985 16077734.453414463 19240833.05311628 16829249.289607882 13459864.375559919 17332474.11530742 17077555.74680587 12868508.757179327 17526441.49124364 0.7154756843718909 0.8150484427184972 0.9173416327237354 1.0978174356003279 0.9602205500766323 0.767974741608819 0.9889328717393585 0.9743880841606073 0.7342339723445026 1.0 24.06302977017325 -4.569557730256658 2.7550586458282673 0.9328005014731837 0.722983337390896 0.31634550623819446 0.10213828698334751 0.34924977384742534 4.952061268612394 0.02763823349321802 0.12049139435428535 2.6942771614389364e-05 4.569557730256658 -0.20981716408228768 EGVTPWAS(ph)FKK ddPTM_KYSE-520_SHP099_60min_R1 7 EGVTPWASFKK 11 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 EGVT(0.001)PWAS(0.999)FKK;EGVT(0.16)PWAS(0.84)FKK;EGVTPWAS(1)FKK;EGVT(0.25)PWAS(0.75)FKK;EGVTPWAS(1)FKK;EGVTPWAS(1)FKK;EGVT(0.001)PWAS(0.999)FKK 169.46 1.4095999999999999e-05 23737498000.0 18223690.0 21039518.0 23796824.0 26015142.0 22916962.0 21437848.0 23117430.0 25212524.0 27118297.0 26638975.0 True False 17212785.587674633 20028747.974319633 25330805.351304647 28487613.273942385 24720396.529722832 21304046.43866606 25454365.428774856 25125067.638891313 22194297.861436073 26402974.406308945 0.6519260035930523 0.7585792292225151 0.9593921109604945 1.0789546978894666 0.9362731694280602 0.8068805472755939 0.964071889669089 0.9515998937183275 0.8405983931921239 1.0 24.65419712862533 -4.617126975083298 3.530816311321699 0.9410756430937411 0.6697710196907896 0.6425651866762869 0.07251323792712047 0.14577863952429626 3.4210007153901154 0.020078632973461297 0.06611854557227456 2.4147547271324278e-05 4.617126975083298 -0.2713046234029516 EGVVGPELHHK ddPTM_KYSE-520_SHP099_60min_R1 5 EGVVGPELHHK 11 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;;; 120.06 0.00025590000000000004 7974500000.0 15284700.0 12633000.0 9831700.0 9066500.0 15702200.0 12641100.0 10125800.0 12011700.0 11392200.0 10747300.0 False True 14436827.221705945 12026091.717480421 10465467.113276185 9928177.434057388 16937873.806703247 12562202.205922054 11149414.682284702 11970034.216251861 9323663.653991692 10652087.283272875 1.3553050062194196 1.1289892203911214 0.9824804129900679 0.9320405635098153 1.5900990440907325 1.1793183694287466 1.0466882579710726 1.123726636661021 0.8752898287486598 1.0 23.344632819373736 -7.368621476665842 1.644408457429997 0.953407349299013 1.180551949398062 0.20185296696178134 0.18174597434514247 0.731108393880823 3.522298725244755 0.15908569821358726 0.057125110945019146 4.279357047942425e-08 7.368621476665842 0.22714460009904902 EGWEYVK ddPTM_KYSE-520_SHP099_60min_R1 3 EGWEYVK 7 0 A0A140TA86;Q5XKP0 A0A140TA86 QIL1 Protein QIL1 0 ;; 105.95 0.029048 868270000.0 979580.0 1024330.0 698500.0 630260.0 1073090.0 999270.0 801870.0 833960.0 849690.0 867900.0 False True 925240.7446556841 975119.6492493231 743526.4276395147 690159.7209054215 1157536.0779531018 993033.1852696146 882930.8450970413 831067.1874077277 695407.7149418204 860211.0812159822 1.0755973328636699 1.133581827231181 0.8643534637899296 0.8023143807096992 1.345641904911089 1.1544064090244883 1.0264118474839254 0.9661200669874456 0.8084152019511326 1.0 19.714331190597743 -7.3582947291485885 3.151807207150102 0.9017843479664525 1.0588497829671764 0.14986006695746856 0.14860748167188123 0.5352206092439721 10.062017636779952 0.10340961599551947 0.043610213890074266 4.38233194725327e-08 7.3582947291485885 0.1570654350007239 EGWRDS(ph)HQPIMCS(ph)Y(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 EGWRDSHQPIMCSYK 15 1 E7EU35;A0A0C4DGP0;Q9UKF7-2;Q9UKF7 E7EU35 PITPNC1 Cytoplasmic phosphatidylinositol transfer protein 1 3 EGWRDS(1)HQPIMCS(1)Y(1)K 49.528 0.044779 29859000.0 67904.0 65493.0 69944.0 58974.0 70295.0 74315.0 60881.0 65663.0 79590.0 63542.0 True False 64137.229756732 62346.61797300279 74452.70215435683 64578.87122882033 75826.81657616157 73851.17251925042 67035.4456213015 65435.230378859334 65138.462300626605 62979.067314927976 1.0183896410534727 0.9899577848817193 1.1821817205080973 1.0254021531613433 1.204000310086972 1.17263045751307 1.0644083578769041 1.0389996735208744 1.0342875034160244 1.0 15.942584771667235 -7.121929249979543 3.617784614552621 1.027329851903245 1.1000491438663327 0.18259521864703498 0.06956864734804792 0.4723074042378824 11.088807844209658 0.03774714740166993 0.020616264264940037 7.552152482068306e-08 7.121929249979543 0.07271929196308768 EGYAWAEDKEHCEEYGR ddPTM_KYSE-520_SHP099_60min_R1 2 EGYAWAEDKEHCEEYGR 17 1 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog 0 ; 218.66 4.0436e-18 2745100000.0 1476710.0 1362400.0 987590.0 952790.0 1527880.0 1376960.0 1001940.0 1258880.0 1108150.0 1148030.0 False True 1394793.952551597 1296948.2589959092 1051251.6315998689 1043342.8751332418 1648115.4635519704 1368365.8818826235 1103225.8731920766 1254513.2391048004 906937.8941882082 1137859.3473538235 1.2258052419178997 1.1398142151857862 0.9238853941347256 0.916934836945896 1.4484351404106188 1.2025791105595434 0.9695626052180442 1.1025204846471264 0.797056240999698 1.0 20.117890804107354 -6.7752033044411375 24.722632564470022 0.975828136830184 1.1364286969793203 0.22596353818417758 0.1586535950106582 387.7069827569937 696388.4416928538 0.07081274955602616 0.048028842565648724 1.6780183106089776e-07 6.7752033044411375 0.16060056014913626 EGYVLQTEVAAS(ph)PSGAWQR ddPTM_KYSE-520_SHP099_60min_R1 1 EGYVLQTEVAASPSGAWQR 19 0 A0A494BZV2;H0Y2S9 A0A494BZV2 MPRIP 1 EGYVLQTEVAAS(0.86)PS(0.14)GAWQR 199.7 1.1083e-10 0.0 86551.0 88069.0 100450.0 69502.0 69343.0 87122.0 77985.0 82884.0 102580.0 102470.0 True False 81749.84349485907 83838.03304573594 106925.16772568262 76107.44918346168 74799.89959230054 86578.2392817349 85868.48486025518 82596.49474927105 83954.05783136426 101562.1955204536 0.8049239490731123 0.8254846462909695 1.0528048077116348 0.7493679000680367 0.7364935270352303 0.8524652193472808 0.845476847169596 0.8132602325698733 0.8266270476050979 1.0 16.63200396232764 -9.888927841294464 6.324132991483712 1.0000000155040807 0.8351784032589626 0.27151711675345513 0.08150529058762963 1.8321691652189036e-08 3.161961191266776e-09 0.08133049756034134 0.019725541149746645 1.2914338295336622e-10 9.888927841294464 -0.16482161224511804 EHALLAY(ph)TLGVK ddPTM_KYSE-520_SHP099_60min_R1 4 EHALLAYTLGVK 12 0 Q5VTE0;P68104;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y660;A0A2R8Y488 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 1 EHALLAY(1)TLGVK;EHALLAY(0.978)T(0.022)LGVK;EHALLAY(0.989)T(0.011)LGVK;EHALLAY(0.992)T(0.008)LGVK 185.77 9.489599999999999e-08 529782000.0 1439870.0 1394840.0 1305670.0 1027260.0 1095680.0 1182700.0 1075190.0 1128320.0 1390510.0 1174650.0 True False 1359997.5407903173 1327829.792702477 1389835.5773458655 1124890.48154302 1181903.7824335822 1175318.3305997096 1183880.6980431848 1124406.1212718673 1138028.4359045639 1164243.514863871 1.168138386366133 1.1405086442398893 1.1937670767342619 0.9661986235538943 1.0151688777684762 1.0095124564530071 1.016866903640524 0.965782593518108 0.9774831651414675 1.0 20.150961415321976 -5.261644784686065 24.99999920919147 0.9941820259981671 1.1647751030370683 0.9337507763198738 0.021291044985026604 4.323910506827751 526296.8577470966 0.006055815415472047 0.009657205092172348 5.4746355764938706e-06 5.261644784686065 0.17059307703890125 EHALLAYTLGVK ddPTM_KYSE-520_SHP099_60min_R1 4 EHALLAYTLGVK 12 0 Q5VTE0;P68104;A0A087WV01;A0A2U3TZH3;Q05639;A0A2R8Y660;A0A2R8Y488 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ;;; 144.1 4.9353e-05 1665880000.0 4176830.0 2798740.0 2239930.0 2115490.0 3249540.0 2580400.0 1915830.0 2102790.0 2097970.0 1804470.0 False True 3945132.9135958203 2664284.329405612 2384319.471814715 2316545.53355474 3505260.3106465633 2564294.766449222 2109500.7930989657 2095495.912284877 1717031.5335198606 1788483.7996564156 2.205853312372031 1.4896888246443416 1.333151282819987 1.2952566492353856 1.9599061010896248 1.4337813778027213 1.1794911385298656 1.1716605499515518 0.9600486925571919 1.0 20.770305619577243 -1.0000000000018245 0.1603699061549016 0.8631026364593432 4.870250686176559 0.5505483998282428 0.254558407884883 56.51646852936617 0.5855101969001352 0.8229317501734263 53.542570438365786 0.09999999999957988 1.0000000000018245 4.007148049717215 EHAPLAS(ph)PVENK ddPTM_KYSE-520_SHP099_60min_R1 1 EHAPLASPVENK 12 0 Q9ULJ3 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 EHAPLAS(1)PVENK 156.2 8.2436e-06 344480000.0 504160.0 479270.0 421710.0 478350.0 492270.0 507810.0 460130.0 558120.0 596860.0 500890.0 True False 476193.239781957 456245.14980106364 448894.10135985713 523812.2401788287 531008.8483668402 504640.56942744507 506644.43083604815 556184.0119861866 488485.2696161832 496452.50428652274 0.9591919381418342 0.9190106724444 0.9042035189347786 1.055110480168946 1.0696065460078201 1.0164931490328362 1.0205295097950462 1.1203166610781974 0.9839516678805162 1.0 18.921296175860267 -5.264446366658447 24.985273731017337 1.042707082219542 0.9266229028503443 0.6299804581302701 0.038700258318155024 149.59278470426253 1242980.2874409168 0.010433945231834149 0.01623558918722631 5.439433020317926e-06 5.264446366658447 -0.11608417936919757 EHAPSIIFMDEIDSIGSSR ddPTM_KYSE-520_SHP099_60min_R1 3 EHAPSIIFMDEIDSIGSSR 19 0 J3QSA9;J3QQM1;P62195-2;P62195 J3QSA9 PSMC5 26S protease regulatory subunit 8 0 ;; 196.66 8.9715e-13 192675000.0 227130.0 153155.0 113962.0 111793.0 142342.0 137696.0 109085.0 126827.0 135362.0 113620.0 False True 214530.64612757013 145797.2039096583 121308.17286564701 122417.77310820889 153543.5055848068 136836.58818826207 120112.37636700583 126387.06673864437 110783.67299833431 112613.41519502245 1.9050185606754644 1.2946699436933744 1.0772088978525969 1.0870620777836049 1.3634566123307967 1.2151002431752047 1.0665903006226813 1.1223091540183636 0.983752005091761 1.0 16.781019174701317 -4.275021701273414 2.732678580169515 1.1291869400353893 2.0408310666158815 0.8363011917718085 0.10473229466195413 0.16945168227385904 1.7523575412072037 0.028457177237102203 0.3438235942485237 5.308579171137508e-05 4.275021701273414 0.9116441265804922 EHDQLIEK ddPTM_KYSE-520_SHP099_60min_R1 1 EHDQLIEK 8 0 O14980 O14980 XPO1 Exportin-1 0 77.67699999999999 0.011928 0.0 193730.0 177530.0 106580.0 99743.0 154670.0 160950.0 125680.0 134950.0 117410.0 140300.0 False True 182983.41070881972 169001.1923220372 113450.31733402942 109222.54473117359 166841.64904808163 159945.45134862897 138384.96091859814 134481.88994756681 96091.3036652416 139057.05115174834 1.3158873224568526 1.2153370931015344 0.815854474076434 0.785451322507786 1.1998071846497944 1.1502146063351064 0.9951668022039618 0.967098675210732 0.6910207204119434 1.0 17.085317375566888 -4.61498603885923 5.881131333883121 0.961868033195196 1.291622444335426 0.42186610103728606 0.1488642080023206 0.19470666139395537 9.77827863557515 0.040992139206515836 0.11251383943897596 2.42668810387849e-05 4.61498603885923 0.3297544111402301 EHDYRDEHFDFIQSHIR ddPTM_KYSE-520_SHP099_60min_R1 4 EHDYRDEHFDFIQSHIR 17 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 0 ;;; 180.14 2.3580999999999998e-08 3076060000.0 2328450.0 2472890.0 2161740.0 2246430.0 1449540.0 1374320.0 1675550.0 1734020.0 1948540.0 773884.0 False True 2199286.2368500046 2354088.6525164363 2301089.2193062957 2459930.0317861945 1563610.5512455963 1365742.3591018803 1844930.9457921493 1728005.08934331 1594734.2546961063 767027.9898326414 2.867282897107665 3.069103974980205 3.0000068443504553 3.207092914983362 2.038531281742094 1.7805639131889737 2.4052980728834896 2.2528579298916394 2.079108293093793 1.0 19.548919698913345 -5.768439770329547 24.965474175518366 2.005389725329081 3.0356836542596564 0.6838437346917721 0.3673125351820949 94.81793938409545 338148.3001119866 0.10844178508236611 0.12559421254108954 1.7043556696878784e-06 5.768439770329547 1.0302939289305755 EHDYRDEHLDFIQSHLR ddPTM_KYSE-520_SHP099_60min_R1 6 EHDYRDEHLDFIQSHLR 17 1 O43237;O43237-2;B4E2E0 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 0 ;;;;; 208.49 2.8812e-17 13017370000.0 5512010.0 5890360.0 5239350.0 5764730.0 3863390.0 3517980.0 4453810.0 4366200.0 5175890.0 2206289.0 False True 5206247.817380482 5607378.2639893815 5577086.884256403 6312608.205970729 4167416.813317835 3496022.981891576 4904044.579796799 4351054.671278741 4236078.849568918 2186742.99592687 2.380822907437172 2.5642603060505724 2.550408024465859 2.886762741542508 1.9057643358548584 1.5987351912883372 2.2426250313508733 1.9897421321953332 1.937163561268625 1.0 21.060352242252744 -5.827179086075252 7.725288729792552 1.8389467615415875 2.5889654183729185 0.5908274883058022 0.330773084015617 0.17984293273834956 18.229608136740406 0.09908510960076905 0.11284450223002956 1.4887470500051362e-06 5.827179086075252 0.750018656831331 EHDYRDEHLDFIQSHLRR ddPTM_KYSE-520_SHP099_60min_R1 1 EHDYRDEHLDFIQSHLRR 18 2 O43237;O43237-2;B4E2E0 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 0 114.4 4.2903999999999994e-05 549700000.0 134820.0 196970.0 184440.0 143370.0 73402.0 80400.0 98970.0 105490.0 208840.0 41825.0 False True 127341.2658429931 187507.26554200225 196329.29751443403 156995.84169423752 79178.3197997498 79898.19377713419 108974.85345411894 105124.079811551 170919.92042797938 41454.46303935759 3.071834888371201 4.523210573587205 4.736023171450455 3.787187921001001 1.9100071257605369 1.927372541317866 2.6287845858878045 2.535892931763327 4.12307645296732 1.0 15.33923981198534 -5.643346844831238 5.413250180537352 2.4286906555152723 4.165769427996073 0.4851510056458763 0.8461364613018362 0.18298079871806888 7.940162859135734 0.25192334474829736 0.3264939323035039 2.2732811729204404e-06 5.643346844831238 1.737078772480801 EHEEAVSVDR ddPTM_KYSE-520_SHP099_60min_R1 2 EHEEAVSVDR 10 0 B4DUC8;Q13126-4;Q13126;Q13126-3;Q13126-2 B4DUC8 MTAP S-methyl-5-thioadenosine phosphorylase 0 ; 128.01 0.00066921 29837000.0 44585.0 37888.0 29494.0 26848.0 40852.0 37738.0 31488.0 36920.0 36875.0 34672.0 False True 42111.78117200599 36067.803608952556 31395.230432068525 29399.625847854473 44066.81998391568 37502.46314379969 34671.11433326557 36791.933137192806 30179.429543103503 34364.83305440783 1.2254324386017785 1.0495556184384343 0.9135860017815973 0.855514874793885 1.2823231212602508 1.0913035161388456 1.0089126368916976 1.0706274370354802 0.8782067846895162 1.0 15.068645330265937 -7.793974254642819 0.012279280083040064 5.484555688839768e-07 2.0343854230153102 0.06045803499503488 0.12839676748927278 3213.51675808281 32.25126202874723 2696.1350027008843 2640.9538466535314 1.6070365167211174e-08 7.793974254642819 2.0343848745597413 EHEVFQR ddPTM_KYSE-520_SHP099_60min_R1 6 EHEVFQR 7 0 O60884 O60884 DNAJA2 DnaJ homolog subfamily A member 2 0 ;;;;; 183.9 0.00020794 4021810000.0 3131330.0 2739590.0 2151740.0 1850270.0 3212230.0 2703430.0 2126070.0 2452860.0 2450840.0 2263150.0 False True 2957628.882748405 2607975.984191577 2290444.6033057272 2026119.1044960404 3465014.2259114245 2686556.8905835613 2340993.904043631 2444351.6011618273 2005829.2366486737 2243100.2517040554 1.318545116519661 1.1626658158547885 1.0211066587709154 0.9032672984441168 1.5447433627984735 1.1976980915331883 1.0436421208839004 1.089720176039784 0.8942218410099461 1.0 21.097062670089052 -7.189064911065865 1.8369215393505933 0.9707372369959896 1.1807661670454643 0.2285956503950849 0.16583319798892743 0.6365615558627852 4.024318792730636 0.12404529057325578 0.05282207795418461 6.470458989363024e-08 7.189064911065865 0.21002893004947476 EHEWFK ddPTM_KYSE-520_SHP099_60min_R1 4 EHEWFK 6 0 Q13131;Q13131-2;A0A087WXX9;P54646 Q13131 PRKAA1;PRKAA2 5-AMP-activated protein kinase catalytic subunit alpha-1;5-AMP-activated protein kinase catalytic subunit alpha-2 0 ;;; 122.5 0.013498 3361160000.0 7970800.0 7584400.0 5155460.0 4822300.0 8126600.0 7679400.0 6060780.0 6556560.0 6408490.0 6176060.0 False True 7528643.834604134 7220034.039583498 5487789.200627656 5280609.942122643 8766117.185971044 7631470.016071203 6673462.789912647 6533816.823672613 5244869.760886332 6121344.913301965 1.2299002819207334 1.1794849239574836 0.8965005694585901 0.8626551872036542 1.432057384468218 1.2466982540859062 1.0901955182121668 1.067382563180573 0.8568165713859691 1.0 22.545417229854046 -7.576330645879828 4.107671644475791 0.9298408822899189 1.1295431003297487 0.20342135007972661 0.15993273848449752 0.38966939120464583 13.537396830238565 0.12880394831066036 0.0452417867933427 2.6525852730110125e-08 7.576330645879828 0.1997022180398298 EHFAQFGHVR ddPTM_KYSE-520_SHP099_60min_R1 3 EHFAQFGHVR 10 0 Q9GZT3-2;Q9GZT3;H0YJ07;H0YJU7;H0YJW7;A0A087WUN7;H0YJ40;G3V4X6;G3V2S9 Q9GZT3-2 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial 0 ;; 169.37 5.3762e-05 2661160000.0 1404150.0 1603580.0 1159100.0 1115670.0 1950080.0 1661860.0 1339960.0 1257160.0 1362660.0 1019290.0 False True 1326259.0003963697 1526541.609777347 1233817.4406255733 1221702.9413615845 2103540.201562573 1651487.7153043333 1475416.233549371 1252799.2053833504 1115235.2938631962 1010259.8835956207 1.312789928544005 1.5110385303474838 1.2212871763593025 1.2092957081631468 2.0821773047899845 1.634715722281791 1.4604323674599549 1.2400761682474284 1.1039093128136068 1.0 19.946295035118883 -7.506751246765781 2.075309106653171 1.0350418939760324 1.4999686930233527 0.3659129512782425 0.2362955036261507 0.4053234711408355 3.1806178037764954 0.21756218624533355 0.07209670200042333 3.113499162483067e-08 7.506751246765781 0.46492679904732026 EHFPEILKK ddPTM_KYSE-520_SHP099_60min_R1 1 EHFPEILKK 9 1 O15479 O15479 MAGEB2 Melanoma-associated antigen B2 0 104.2 0.0036788000000000003 269010000.0 621170.0 506300.0 391480.0 316430.0 549490.0 482190.0 340190.0 408100.0 456150.0 362070.0 False True 586712.461828305 481976.5880282064 416715.42719014623 346503.4120618512 592731.7368295758 479180.47335070156 374579.72513445193 406684.39635125623 373324.65860574006 358862.3414861978 1.6349234622905413 1.34306816934912 1.1612124734636542 0.9655608070404849 1.6516966767112646 1.335276561386231 1.0437978072125427 1.1332601650733467 1.040300459111 1.0 18.45307101112757 -1.0000000000000024 0.15758216376045134 0.9596589395461435 2.928107599987139 0.34895840461120464 0.1931822838153021 88.41350828992984 0.904131680410002 0.6531657792633512 40.25651367091301 0.09999999999999944 1.0000000000000024 1.9684486604409954 EHFQSYDLDHMEK ddPTM_KYSE-520_SHP099_60min_R1 3 EHFQSYDLDHMEK 13 0 H3BMR3;J3QRA5;Q13564-3;Q13564-2;Q13564;Q13564-4 H3BMR3 NAE1 NEDD8-activating enzyme E1 regulatory subunit 0 ;; 202.4 8.3219e-09 1990020000.0 1633010.0 1715500.0 1093970.0 1465520.0 1834380.0 1705330.0 1475550.0 1394740.0 1335000.0 1421580.0 False True 1542423.6799752729 1633084.8049820017 1164489.0566138867 1604802.5801753448 1978735.2698055236 1694686.4029099555 1624712.9939802482 1389901.9724747622 1092597.6526113385 1408985.9071725039 1.0947048314134997 1.1590497794681356 0.826473175271665 1.1389770273826216 1.4043683898701087 1.202770300457287 1.153108051478426 0.986455553174383 0.7754496670615532 1.0 20.426225751054037 -7.432544282068536 3.7719227743518813 0.8845112208087993 1.1405397221922742 0.34607684718914256 0.14178217715689959 0.2819358127275179 7.304715326888509 0.09791209866207636 0.04107769944784594 3.6936498079134484e-08 7.432544282068536 0.2560285013834749 EHGAFDAVK ddPTM_KYSE-520_SHP099_60min_R1 4 EHGAFDAVK 9 0 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586;A0A494C1T2 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 0 ;;; 146.69 0.00055089 2457520000.0 5268100.0 4965400.0 3464730.0 3195380.0 5109300.0 5054270.0 3743490.0 4483990.0 4191970.0 4125950.0 False True 4975867.991303013 4726854.7307826495 3688072.039564006 3499067.954473972 5511372.84205964 5022724.426143739 4121918.5021416475 4468436.085261138 3430813.9189641667 4089397.292940525 1.2167729459528893 1.1558805349978 0.9018620044402823 0.8556439259434071 1.3477225241905093 1.228230975458023 1.0079525677921448 1.0926881799855797 0.8389534381721085 1.0 21.963456799640582 -7.7415909149479445 22.80671041698464 0.9194769600558748 1.0972519155559257 0.19624977222609608 0.14667259059080598 134.0004644013073 153975.16193754275 0.1064195716015788 0.04004719769579688 1.8130470939436326e-08 7.7415909149479445 0.17777495550005096 EHGAVAVER ddPTM_KYSE-520_SHP099_60min_R1 2 EHGAVAVER 9 0 F2Z2K0;Q9UNZ2;Q9UNZ2-5;Q9UNZ2-4;Q9UNZ2-6 F2Z2K0 NSFL1C NSFL1 cofactor p47 0 ; 87.29799999999999 0.007795799999999999 123417000.0 58361.0 51105.0 38245.0 36812.0 56597.0 55974.0 38357.0 47250.0 39937.0 39269.0 False True 55123.59899023086 48649.83908983109 40710.333894163596 40310.60141206865 61050.86190712021 55624.64550349896 42234.4998882453 47086.10077823288 32685.447529842004 38921.107210819704 1.4162906181380939 1.2499603062758422 1.045970600827268 1.035700274242524 1.5685797831092698 1.4291640061060706 1.0851309974168593 1.2097831781399935 0.8397871970290649 1.0 15.248265131416623 -7.539448927944334 2.0133295431762175 0.927288029080218 1.2667436931020668 0.36274891180046065 0.17305875805968352 0.4099773620450079 3.014846691168904 0.160621259457555 0.051884748361788836 2.8876933454741774e-08 7.539448927944334 0.3394556640218488 EHGS(ph)LPQQTTLLDLMDALPSSGPAAQK ddPTM_KYSE-520_SHP099_60min_R1 2 EHGSLPQQTTLLDLMDALPSSGPAAQK 27 0 O95208-5;O95208-3;O95208-2;O95208;F6PQP6;E9PBC1 O95208-5 EPN2 Epsin-2 1 EHGS(0.983)LPQQT(0.009)T(0.009)LLDLMDALPSSGPAAQK;EHGS(0.996)LPQQT(0.002)T(0.002)LLDLMDALPSSGPAAQK 126.34 0.0001085 330250000.0 152550.0 161609.0 111309.0 121459.0 118202.0 148703.0 106041.0 140720.0 156563.0 149406.0 True False 144087.7473991144 153845.06105994544 118484.15624069682 133002.4268420202 127503.82492261814 147774.88941842303 116760.6591404286 140231.87516429482 128135.10583205191 148082.379076109 0.9730242605371601 1.0389153795325954 0.8001232623349482 0.8981651137145883 0.8610330663115952 0.997923522976843 0.7884844899771487 0.9469855633006861 0.8652961049889337 1.0 17.176040453132686 -4.741764450373664 24.999779180970645 0.8916651671959802 1.0059698653188047 0.287074849101408 0.06997181414713093 278.34913282465556 353676.49879865797 0.01647317886378931 0.04345465385991748 1.812322781152993e-05 4.741764450373664 0.11430469812282451 EHHQEADKKR ddPTM_KYSE-520_SHP099_60min_R1 3 EHHQEADKKR 10 2 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 0 ;; 122.86 0.00067473 247887000.0 360751.0 329399.0 106140.0 73250.0 232292.0 571940.0 146386.0 119577.0 150177.0 238714.0 False True 340739.4228907105 313574.1776020207 112981.95423000454 80211.65797658438 250572.0588393159 568370.3103096285 161184.125469684 119162.21529648172 122908.6424540924 236599.17967668144 1.440154709565516 1.3253392426403483 0.477524708176914 0.339019171943857 1.0590571750152673 2.4022497080772656 0.6812539489356896 0.503645935963598 0.5194804251732829 1.0 17.852085546092386 -4.5907219429710375 10.356874284521073 0.8905734374405839 1.4115624651577858 0.1180611127357527 0.5596809255919342 0.885698582462962 128.8878589901406 0.15599313511707658 0.4136073438679434 2.5661264730737562e-05 4.5907219429710375 0.5209890277172019 EHHWVPR ddPTM_KYSE-520_SHP099_60min_R1 7 EHHWVPR 7 0 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 0 ;;;;;; 158.38 0.0018313 6474460000.0 4577980.0 5450450.0 4385570.0 4274767.0 5428200.0 5092440.0 4799644.0 4514938.0 4591910.0 3119740.0 False True 4324030.323423125 5188602.200707758 4668270.859360096 4681039.570424439 5855368.4577668505 5060656.193015292 5284838.85553138 4499276.733872453 3758134.896631118 3092101.5307209888 1.3984114947269812 1.6780180563792566 1.5097404832860033 1.5138699437637664 1.8936533615057418 1.6366397230932108 1.7091414376354932 1.4550869980079055 1.2153982847241207 1.0 21.560156260987583 -7.80380617561462 1.9844733711926599 1.0098000396921238 1.62481409961369 0.7228529886882149 0.12816341529747516 0.16069115533654518 1.2573937146615322 0.12270986910706623 0.035396918906778346 1.5710638091791635e-08 7.80380617561462 0.6150140599215661 EHIEELLR ddPTM_KYSE-520_SHP099_60min_R1 1 EHIEELLR 8 0 H0YMC2;B4DIH5;P61201;P61201-2 H0YMC2 COPS2 COP9 signalosome complex subunit 2 0 172.21 0.00018963 300110000.0 193420.0 180260.0 129350.0 112820.0 179830.0 175520.0 127510.0 144270.0 139290.0 146640.0 False True 182690.60702678913 171600.03902422392 137688.1079673174 123542.37887943027 193981.59790726408 174424.51457416202 140399.955177677 143769.56104287098 113998.4472151561 145340.88368419383 1.2569801586162859 1.1806728752048026 0.9473460218288965 0.8500180798946512 1.3346664268861883 1.2001063303919564 0.9660045516356376 0.9891887086311025 0.7843522367929135 1.0 17.149081057599513 -6.8978435078141285 5.57859074302718 0.9268059797298958 1.11871434058822 0.30304615921241107 0.14407346540102067 0.3054457891632285 14.092688255025376 0.06632341473176723 0.0442878372285194 1.265192160352159e-07 6.8978435078141285 0.1919083608583243 EHIKNPDWR ddPTM_KYSE-520_SHP099_60min_R1 5 EHIKNPDWR 9 1 Q14974;J3KTM9;Q14974-2 Q14974 KPNB1 Importin subunit beta-1 0 ;;;; 143.96 0.00036058 13245600000.0 11241620.0 11174980.0 8200080.0 6776580.0 10171860.0 9630400.0 7712930.0 8159020.0 8150810.0 6542000.0 False True 10618024.928986128 10638117.186813047 8728670.277391894 7420624.125746933 10972327.512033511 9570293.101384506 8492628.235342795 8130718.263949587 6670828.369199277 6484042.969598983 1.6375623941373754 1.640661117869023 1.3461771179366093 1.1444440082428808 1.692204626569912 1.4759761997654368 1.30977358958928 1.2539581094806416 1.0288069342655584 1.0 22.62846222091713 -7.42406063973921 1.256856887452726 0.9911790475000727 1.4833508071498716 0.5911303561011947 0.1538405546871149 0.3596900619964789 0.9996098781042645 0.14751019779705363 0.05222151254535461 3.766512041977041e-08 7.42406063973921 0.49217175964979887 EHIYDLR ddPTM_KYSE-520_SHP099_60min_R1 2 EHIYDLR 7 0 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 0 ; 116.9 0.0040548 268770000.0 902380.0 763870.0 520030.0 478040.0 798180.0 766220.0 540060.0 639560.0 663970.0 618270.0 False True 852323.1825500677 727172.5386077535 553551.9658774188 523472.77787203254 860992.224977035 761437.7367651225 594654.5352776741 637341.5156344268 543409.7853216117 612792.6088067808 1.3908835881844213 1.1866535727702254 0.9033267665471449 0.8542413376873617 1.4050303685182237 1.242570040535869 0.9704009590382873 1.0400607097325265 0.8867760111854643 1.0 19.225039370749762 -4.433159094596966 3.7084064863142445 1.050125356157364 1.3811246243122655 0.3122263988982946 0.16144761073134253 0.3300650776493114 7.798269739181497 0.04430391352588233 0.21852081241712412 3.6884245618655665e-05 4.433159094596966 0.33099926815490144 EHLELFWSR ddPTM_KYSE-520_SHP099_60min_R1 7 EHLELFWSR 9 0 A0A087WVQ6;Q00610-2;Q00610;J3KS13 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ;;;;;; 220.39 8.0311e-09 3066930000.0 2219361.0 2376077.0 1623984.0 1564491.0 2564512.0 2233654.0 1892579.0 1516722.0 1497355.0 1657666.0 False True 2096248.621143534 2261926.694355711 1728668.6071062717 1713179.7542586296 2766324.504322715 2219712.9368541166 2083899.3551110737 1511460.845387577 1225473.0772478292 1642980.3688846342 1.2758817213175888 1.3767216804247389 1.05215414611424 1.0427268558428677 1.6837234069940121 1.3510282769604893 1.268365340558369 0.9199506421453219 0.7458841873319295 1.0 20.647883811704684 -7.279982024644372 4.107767580969637 0.8627613297672141 1.2969024015088553 0.5211559486767161 0.17799794131076263 0.18123540879232453 7.298858460375506 0.10644404957875621 0.05125769024820299 5.2482918236772994e-08 7.279982024644372 0.4341410717416412 EHLLLAR ddPTM_KYSE-520_SHP099_60min_R1 1 EHLLLAR 7 0 P49411 P49411 TUFM Elongation factor Tu, mitochondrial 0 94.40100000000001 0.010997 311330000.0 625830.0 584650.0 407790.0 383910.0 619520.0 545170.0 438740.0 476590.0 426720.0 439300.0 False True 591113.9623388251 556562.536422459 434076.79588706925 420396.69097324956 668272.6994133816 541767.3918094566 483092.1208897659 474936.82052694185 349238.40473581356 435408.14377022797 1.3576088798439325 1.278254769428856 0.9969422990768375 0.9655232613083594 1.5348190174551262 1.2442748248074942 1.1095155839453053 1.0907853408859844 0.8020943331737782 1.0 18.73200886603975 -7.390094399189043 2.0457701643336663 0.9103244003499296 1.2173169416935161 0.3572642316177532 0.1645400673131578 0.41477365880315453 3.1839154903375473 0.13702839539209505 0.04986419990025007 4.072917383676652e-08 7.390094399189043 0.30699254134358656 EHMQPTHPIR ddPTM_KYSE-520_SHP099_60min_R1 5 EHMQPTHPIR 10 0 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 ;;;; 136.96 0.00030345 7145520000.0 3337980.0 2775740.0 2032020.0 1848070.0 2818720.0 2541960.0 1964840.0 2292350.0 2245860.0 1855810.0 False True 3152815.5953018377 2642389.2839293154 2163007.260546957 2023710.017157495 3040537.2276770463 2526094.6847478165 2163465.2021904713 2284398.3728885115 1838068.437523374 1839368.9671983344 1.7140745829283515 1.4365738093070661 1.1759507195783443 1.1002197238545037 1.6530327965184122 1.3733485395241172 1.1761996862901245 1.2419467837211753 0.9992929479086835 1.0 20.810779474715563 -1.000000000330258 0.10878890890639563 0.835952901179408 2.9618255329307805 0.448003393966513 0.17782651544568023 123.05598792449851 0.9383108791824276 1.857559384359403 39.239604603516405 0.09999999992395528 1.000000000330258 2.1258726317513723 EHPDAWTR ddPTM_KYSE-520_SHP099_60min_R1 4 EHPDAWTR 8 0 O14980;C9IYM2;H7BZC5;F8WF71;C9IZS4;C9JQ02;C9JV99;C9J673;C9JKM9 O14980 XPO1 Exportin-1 0 ;;; 126.41 0.0014588 1524670000.0 3644590.0 3341160.0 2262920.0 2070150.0 3361440.0 3260000.0 2493680.0 2630050.0 2522750.0 2742190.0 False True 3442417.3273899616 3180645.658416598 2408791.444000016 2266896.433586706 3625966.2040226557 3239653.130764398 2745765.5103714997 2620926.970408286 2064682.1933522532 2717896.3299915344 1.266574184380566 1.1702601101148347 0.8862705385114961 0.8340628774438085 1.3341076199304298 1.1919708250146865 1.0102539526884942 0.9643219064269642 0.7596618644239033 1.0 21.374058997077928 -7.2294133595856565 2.5709854480592687 0.8833230587692837 1.1018554244204957 0.25393584211551934 0.15707710465943253 0.4549762948702286 5.84606792388171 0.10602900791284058 0.04826713809395935 5.896395966200107e-08 7.2294133595856565 0.21853236565121192 EHPFLVK ddPTM_KYSE-520_SHP099_60min_R1 1 EHPFLVK 7 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 105.12 0.0047371 0.0 1080100.0 978900.0 620390.0 673890.0 1144400.0 983970.0 800500.0 712030.0 771970.0 668750.0 False True 1020184.6998740305 931872.1746411447 660381.3320590968 737936.3029875834 1234457.7692547038 977828.6782448604 881422.3521271317 709560.1341190513 631799.7077800577 662825.3952796271 1.53914546295204 1.405908978861642 0.9963126590532954 1.1133192968206496 1.8624177317978612 1.4752432317900892 1.3297956873774952 1.0705083709408993 0.9531917640444653 1.0 19.338269353010222 -7.294276417800686 2.972405025172644 0.9847527597280158 1.389831911522839 0.3914692651402839 0.22062411342627042 0.3215285846066254 5.659288498145952 0.15257276622161728 0.06754272151435398 5.0783611442770285e-08 7.294276417800686 0.40507915179482323 EHPHS(ph)RS(ph)PS(ph)PEPR ddPTM_KYSE-520_SHP099_60min_R1 1 EHPHSRSPSPEPR 13 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;A0A3B3IT83 Q9UDY2-7 TJP2 Tight junction protein ZO-2 3 EHPHS(1)RS(1)PS(1)PEPR 87.411 0.020441 520810000.0 212170.0 184080.0 163800.0 197000.0 174710.0 174710.0 185820.0 183100.0 230470.0 172710.0 True False 200400.5071495909 175236.520490287 174358.81008926628 215722.82076979015 188458.68303607902 173619.57008461587 204604.49902843632 182464.8688358611 188622.45767590654 171179.9237663467 1.17070099542239 1.0236978533153067 1.01857043894504 1.2602109875001615 1.1009391690892274 1.0142519418433622 1.1952599027191573 1.0659244660309457 1.101895908853004 1.0 17.385153984697318 -8.66667113978772 1.2201229202289825 0.9999216064628487 1.1056695266762988 0.1439223278937164 0.07767432199934839 8.29629245310389 13.248697368871737 0.07604127315098595 0.02254677697738727 2.154412500025005e-09 8.66667113978772 0.10574792021345014 EHPWEVMPDLYFYR ddPTM_KYSE-520_SHP099_60min_R1 3 EHPWEVMPDLYFYR 14 0 C9J9K3;A0A0C4DG17;P08865 C9J9K3 RPSA 40S ribosomal protein SA 0 ;; 115.06 0.00023618 111461000.0 175356.0 149645.0 125098.0 124375.0 181958.0 164967.0 149621.0 120129.0 118864.0 118018.0 False True 165628.6531164803 142455.82957827573 133162.01724387694 136195.56260529257 196277.05940060044 163937.37976159825 164746.15084024164 119712.30053731927 97281.29391759865 116972.45233661457 1.415962902443445 1.2178579377674925 1.1384049370929938 1.164338781351349 1.677976784104423 1.4015041703138063 1.408418371585025 1.0234230209418895 0.831659864988124 1.0 16.835809281537617 -7.3828524722563476 4.210011001195482 0.9193758386359184 1.3407476316357452 0.5901305053914268 0.1519832986770411 0.18001133199291403 5.267303174331282 0.09960257685532875 0.044362734831254344 4.1414033240416925e-08 7.3828524722563476 0.42137179299982674 EHPWEVMPDLYFYRDPEEIEK ddPTM_KYSE-520_SHP099_60min_R1 2 EHPWEVMPDLYFYRDPEEIEK 21 1 C9J9K3;A0A0C4DG17;P08865 C9J9K3 RPSA 40S ribosomal protein SA 0 ; 195.93 2.338e-13 204553000.0 597820.0 411626.0 240565.0 299542.0 430940.0 428330.0 392614.0 309031.0 291705.0 335872.0 False True 564657.7328753754 391850.86909677775 256072.2048176094 328010.3816194135 464852.52628680633 425656.63358905335 432303.2546633872 307959.04358937783 238738.72528463768 332896.43538446154 1.6961963928008215 1.1770954190129126 0.7692248327077219 0.9853226011284707 1.396387815778048 1.2786458139675279 1.298611846546572 0.9250896400669368 0.7171561480041645 1.0 18.344713896790346 -4.290697885814869 4.0292669767243465 1.0664088094595936 1.7354781630450655 0.4524959731834175 0.21245112593279988 0.21219337548647016 7.084451167157589 0.05873936150267849 0.3896293624767896 5.1203790757945415e-05 4.290697885814869 0.6690693535854719 EHPWEVMPDLYFYRDPEEIEKEEQAAAEK ddPTM_KYSE-520_SHP099_60min_R1 13 EHPWEVMPDLYFYRDPEEIEKEEQAAAEK 29 2 C9J9K3;A0A0C4DG17;P08865 C9J9K3 RPSA 40S ribosomal protein SA 0 ;;;;;;;;;;;; 293.47 1.7054e-52 18040040000.0 30290660.0 23359050.0 14381857.0 13370820.0 19874375.0 22256050.0 17646060.0 16014692.0 17372182.0 16789624.0 False True 28610376.70686632 22236846.175351128 15308934.514004802 14641578.712716376 21438375.242774773 22117141.736487433 19429895.953749523 15959140.7713092 14217831.66587038 16640880.993489832 1.7192825739249706 1.3362781804671593 0.919959377150398 0.8798559834929646 1.2882956888617734 1.329084784942576 1.167600198652391 0.9590322037368492 0.8543917639596493 1.0 23.988228478176946 -4.432603686971724 3.0962256699606723 1.0658995593472005 1.723723566335687 0.6313760511779325 0.15859422087725303 0.20559017866588042 3.352769001780751 0.045847829396202154 0.26109055715802626 3.693144607151406e-05 4.432603686971724 0.6578240069884864 EHQHEEIQNVR ddPTM_KYSE-520_SHP099_60min_R1 2 EHQHEEIQNVR 11 0 F5H6I7;Q6DD88 F5H6I7 ATL3 Atlastin-3 0 ; 103.35 0.0012935 119616000.0 45241.0 44816.0 29043.5 32235.0 41020.0 42896.0 32890.0 45764.0 40188.0 29155.0 False True 42731.391544302394 42662.97208981254 30915.690481243048 35298.60470819385 44248.04062812642 42628.27015253671 36214.842175467 45605.255365397876 32890.87225703712 28896.709382246765 1.4787632383691143 1.4763955136020896 1.069868893107832 1.2215440949093053 1.5312484215005822 1.4751946177901551 1.2532514237664814 1.5782162170138416 1.1382220661167821 1.0 14.818617594482777 -7.968299370624263 7.487930439160869 1.0001583189799905 1.3755896443302118 0.4252990831487816 0.15107855048785937 0.16119128989585038 28.46785540558052 0.15120327700344785 0.03912914618060752 1.0757234335011918e-08 7.968299370624263 0.3754313253502213 EHS(ph)PSESEKEVVGADPR ddPTM_KYSE-520_SHP099_60min_R1 1 EHSPSESEKEVVGADPR 17 1 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 EHS(0.784)PS(0.105)ES(0.111)EKEVVGADPR 92.993 0.00097043 345850000.0 498770.0 630410.0 503250.0 695350.0 535970.0 420890.0 454010.0 489740.0 662480.0 508450.0 True False 471102.23382665537 600124.1573352987 535690.3002284701 761435.8549354001 578147.7897478531 418263.0693887815 499905.7615106038 488041.2062461755 542190.331761768 503945.52856811404 0.9348276889472995 1.190851239498963 1.0629924661710048 1.5109487271350663 1.147242622413128 0.8299767448621155 0.9919837227864913 0.9684403940101854 1.075890748157486 1.0 18.942908275797603 -6.0682543722373445 9.626268404557472 0.9738841170400506 1.187994968827577 0.3076597308024145 0.1470334414050022 0.6240108020519688 85.2303910606439 0.04928827160186419 0.049357796056951064 8.545660352191115e-07 6.0682543722373445 0.21411085178752642 EHSAFGDRPEKR ddPTM_KYSE-520_SHP099_60min_R1 6 EHSAFGDRPEKR 12 2 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 0 ;;;;; 198.57 6.2258e-08 6656150000.0 2131320.0 2270130.0 1855580.0 1578220.0 2253790.0 2130220.0 1518290.0 1721110.0 2090100.0 1287730.0 False True 2013091.4309189122 2161069.5472654006 1975193.6558329738 1728213.5542908553 2431150.4506890546 2116924.506815015 1671773.5702824513 1715139.871120092 1710590.5271333049 1276321.714038781 1.5772601913577917 1.6932012700990033 1.5475672270611842 1.354057942665656 1.904810067828388 1.6586135639079884 1.3098371295371183 1.343814692059668 1.3402502741415623 1.0 20.283560594937658 -7.712420416275676 0.7372624773607871 1.020744093876042 1.6205494120886748 0.6132134529489017 0.15037662125614973 0.4495737166206066 0.5385513675778407 0.15214503380020442 0.06272104508706457 1.9390079232986566e-08 7.712420416275676 0.5998053182126328 EHSLQVS(ph)PSLEK ddPTM_KYSE-520_SHP099_60min_R1 3 EHSLQVSPSLEK 12 0 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 EHSLQVS(0.981)PS(0.019)LEK;EHSLQVS(1)PSLEK;EHS(0.001)LQVS(0.989)PS(0.009)LEK 169.64 1.5184e-06 2075620000.0 2950160.0 2680020.0 2609680.0 2285820.0 2436800.0 2760850.0 2423560.0 2626770.0 3290830.0 2569030.0 True False 2786508.7438018452 2551267.816407965 2777904.1484356364 2503063.645543159 2628562.2965045935 2743618.511064693 2668557.096466242 2617658.347962729 2693298.227073389 2546270.392875095 1.0943491121755877 1.0019626444806702 1.0909698185270083 0.983031359335271 1.032318603656456 1.0775047766890005 1.0480258121577843 1.0280362821196798 1.0577424277522542 1.0 21.279954198990332 EHSPS(ph)ESEKEVVGADPR ddPTM_KYSE-520_SHP099_60min_R1 1 EHSPSESEKEVVGADPR 17 1 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 EHS(0.381)PS(0.616)ES(0.003)EKEVVGADPR 122.49 5.8235e-05 548540000.0 579200.0 747090.0 687390.0 912680.0 643660.0 618990.0 611570.0 648820.0 843030.0 650670.0 True False 547070.6213934256 711198.6749950476 731700.2592628878 999420.8327927518 694312.3800755693 615126.6538073176 673393.4639480186 646569.3948557266 689957.003056882 644905.5700136006 0.8482956991391597 1.1027950572361298 1.134585113363894 1.5497165465196319 1.0766109215972917 0.953824377411324 1.0441737445899517 1.002579951111433 1.069857410352854 1.0 19.298728404512893 -5.991910781758275 24.99498825843856 1.0160274770517006 1.1731177564326742 0.14874097471509862 0.16179087733249328 365.2002832816726 1128428.165912287 0.05295204544277956 0.05994056335511062 1.0188006614196488e-06 5.991910781758275 0.15709027938097364 EHTALLK ddPTM_KYSE-520_SHP099_60min_R1 2 EHTALLK 7 0 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 0 ; 116.54 0.0045763 1598520000.0 3680500.0 3455000.0 2252900.0 2171500.0 3046800.0 3209500.0 2255200.0 2941200.0 2507700.0 2784900.0 False True 3476335.3281051465 3289016.6139392746 2398125.538767453 2377878.70711472 3286565.8260793644 3189468.319996426 2483177.6246309867 2930997.6636812408 2052364.8939726283 2760227.952619413 1.2594377666548007 1.191574272269089 0.8688143080688931 0.8614791053246709 1.1906863789856432 1.1555090285096457 0.899627736279712 1.0618679739475032 0.7435490579772465 1.0 21.396355985796298 -4.63085761336924 6.053441915762064 0.9831905256489616 1.2422258677199087 0.3743611020158749 0.13121872056614406 0.21430871431002502 10.380658782031379 0.034681229818646804 0.09451118163468773 2.3396041693147996e-05 4.63085761336924 0.25903534207094714 EHTLAWK ddPTM_KYSE-520_SHP099_60min_R1 2 EHTLAWK 7 0 P22102;C9JZG2;C9JKQ7;C9JBJ1;C9JTV6;F8WD69;P22102-2 P22102 GART Trifunctional purine biosynthetic protein adenosine-3;Phosphoribosylamine--glycine ligase;Phosphoribosylformylglycinamidine cyclo-ligase;Phosphoribosylglycinamide formyltransferase 0 ; 117.93 0.004464 878980000.0 1675770.0 1582810.0 962350.0 879210.0 1442840.0 1430240.0 1076430.0 1259140.0 1115780.0 1191740.0 False True 1582811.6975353267 1506769.4317537528 1024384.6208144426 962769.8540558743 1556383.299363384 1421313.3416394102 1185246.0493444193 1254772.3372254865 913182.478524855 1181182.1107596897 1.340023424937688 1.2756453200807945 0.8672537549316581 0.8150901078553067 1.3176488918904976 1.2032973820821564 1.0034405690263255 1.0623021850698928 0.7731089644911165 1.0 20.171799981167975 -4.6413506805631215 6.657856717794719 1.0194170376286975 1.3227821157116677 0.3676937826242993 0.15858577956362918 0.23432449846948492 12.425051907483603 0.043134659730897175 0.1162528472216315 2.2837539916279195e-05 4.6413506805631215 0.3033650780829702 EHVEEISELFYDAK ddPTM_KYSE-520_SHP099_60min_R1 5 EHVEEISELFYDAK 14 0 H7C4G5;Q9Y265 H7C4G5 RUVBL1 RuvB-like 1 0 ;;;; 196.33 1.0390999999999999e-10 2950780000.0 4571400.0 3789510.0 2372500.0 3905220.0 3946240.0 3853540.0 3386290.0 3747210.0 3031570.0 3114170.0 False True 4317815.329140033 3607456.251429522 2525435.1461342135 4276370.934652799 4256786.636965815 3829488.62746192 3728609.240205601 3734211.80311539 2481113.307660643 3086580.876587595 1.3988991384906275 1.1687548117701638 0.8181982741130172 1.385471855634831 1.3791268744177392 1.2406895463227439 1.2080063310467366 1.209821466672142 0.8038387480724841 1.0 21.557578163608508 -7.7486422359371785 24.20317404506375 0.9019194680535042 1.2209051688600032 0.38471579591499094 0.1638935490865195 146.26889723639525 276642.82684045495 0.11707813439985043 0.043556779355082016 1.7838476642890258e-08 7.7486422359371785 0.318985700806499 EHVIEALR ddPTM_KYSE-520_SHP099_60min_R1 6 EHVIEALR 8 0 X1WI28;P27635;F8W7C6;A0A087WV22;H7C123;H7C2C5 X1WI28 RPL10 60S ribosomal protein L10 0 ;;;;; 135.83 0.0012131 4386800000.0 6035100.0 5461010.0 3553740.0 3257140.0 5293770.0 5296330.0 3803860.0 4717010.0 4148300.0 4464340.0 False True 5700320.972326422 5198654.882456874 3782819.766585044 3566697.606305152 5710359.581568914 5263273.639896141 4188391.290896075 4700647.793268413 3395073.2901330474 4424789.42080396 1.288269436173689 1.174893172998119 0.8549152076705441 0.8060717171162244 1.2905381563969145 1.1894969769973445 0.9465741513491204 1.062343841984311 0.767284715103161 1.0 22.077177367165955 -7.381259844159238 1.9673386031575029 0.9009837504557727 1.0813032198777264 0.15381959091613406 0.16939152313596462 0.755179836971375 5.335569739638411 0.14329115567153594 0.052149060698837915 4.156618400780693e-08 7.381259844159238 0.18031946942195365 EHVIEALRR ddPTM_KYSE-520_SHP099_60min_R1 3 EHVIEALRR 9 1 X1WI28;P27635;F8W7C6;A0A087WV22;H7C123;H7C2C5 X1WI28 RPL10 60S ribosomal protein L10 0 ;; 157.96 0.00053625 325100000.0 429110.0 432320.0 362993.0 300142.0 470530.0 371617.0 285784.0 354252.0 411739.0 317025.0 False True 405306.4128904224 411550.6982744504 386392.10958933487 328667.4054390168 507558.0340505206 369297.60045867297 314673.8357030601 353023.1824950386 336977.5766955356 314216.4051417181 1.289895773289179 1.3097683365349193 1.229700624367668 1.0459905977562853 1.6153136047164738 1.1752970068259552 1.0014557819192658 1.1235033458415955 1.072437884150421 1.0 18.26139897969894 -6.522032617728768 24.942659600975485 1.0637461728720745 1.2924038418071977 0.43049524202865874 0.134469269469092 32.49501908229514 957974.3380858399 0.050713013305484514 0.039776264517853044 3.0058505394569415e-07 6.522032617728768 0.22865766893512318 EHVYDLFEK ddPTM_KYSE-520_SHP099_60min_R1 1 EHVYDLFEK 9 0 A0A494C0L2;F8W667;A0A499FI31;Q15020-2;Q15020-4;Q15020;F8VVK9;F8VZM2 A0A494C0L2 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 0 119.16 0.00052992 0.0 179380.0 155130.0 106730.0 99430.0 185400.0 174370.0 127120.0 128090.0 139670.0 144750.0 False True 169429.43381483536 147677.32194512294 113609.98657403777 108879.79730528039 199989.92521829947 173281.69215073274 139970.5301716438 127645.68568643082 114309.44879417664 143467.62761379583 1.1809593330066541 1.0293424684114754 0.7918858662657153 0.7589154369958405 1.393972483859965 1.2078103962044604 0.9756244840713059 0.88971768620893 0.7967612673005868 1.0 17.130365714823586 -7.0768053872542 4.44430398945886 0.8861031564432392 1.0512039212410027 0.1386526400242949 0.1826801371512702 0.5170719994660109 18.802805615531476 0.0982546237856905 0.05600474709057004 8.379046734922357e-08 7.0768053872542 0.16510076479776348 EHYVDLK ddPTM_KYSE-520_SHP099_60min_R1 8 EHYVDLK 7 0 Q32Q12;P22392-2;J3KPD9;E7ERL0;P15531;P15531-2;E5RHP0 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ;;;;;;; 139.28 0.0028769000000000004 37497840000.0 66188260.0 62808010.0 39967370.0 35777200.0 55618280.0 61446360.0 44524850.0 52865040.0 49243280.0 49903850.0 False True 62516665.274774924 59790618.92285498 42543730.62025304 39177454.331192605 59995122.211275324 61062850.474870116 49025856.35866049 52681663.51503309 40301941.674069665 49461740.71360786 1.2639398527592742 1.2088256106685191 0.8601341159137259 0.7920759311330534 1.212960185907277 1.2345471387356686 0.9911874441000526 1.0650992616711399 0.8148104189746367 1.0 25.559809677790955 -4.619753511482184 7.2905901215822775 1.007810027904276 1.250026146276019 0.3126141125280053 0.1424887686033161 0.2706324118614935 17.154678219404314 0.039168671485264234 0.10501779357729243 2.4001947889536407e-05 4.619753511482184 0.24221611837174284 EIAATCSGTEWGQSSGAAS(ph)PGLFQAGHR ddPTM_KYSE-520_SHP099_60min_R1 3 EIAATCSGTEWGQSSGAASPGLFQAGHR 28 0 G3V3Z8;P49757-3;P49757 G3V3Z8 NUMB Protein numb homolog 1 EIAATCSGTEWGQS(0.001)S(0.003)GAAS(0.995)PGLFQAGHR;EIAATCSGTEWGQSSGAAS(1)PGLFQAGHR;EIAATCSGTEWGQSSGAAS(1)PGLFQAGHR 232.74 5.999100000000001e-31 3575130000.0 687750.0 840970.0 582910.0 636290.0 725080.0 693950.0 630940.0 821360.0 911050.0 838790.0 True False 649599.1365043656 800568.5388782956 620485.3112889758 696762.8102924358 782139.6708591395 689618.8006423179 694721.572581001 818510.893866866 745626.2857015433 831358.9731687458 0.7813702112679461 0.9629637313312543 0.7463506515410309 0.8381010282919144 0.940796570557234 0.8295078574948417 0.8356457258566081 0.9845456899888757 0.8968764514077112 1.0 19.665112028429363 -7.6427434128254825 0.7063734772458645 0.9968341187938923 0.844687578633979 0.33886476690715017 0.06804357817912804 0.7632186227081843 0.8299136717904074 0.06393490165393906 0.027611686731468004 2.2764419868896078e-08 7.6427434128254825 -0.15214654015991325 EIAEAYLGK ddPTM_KYSE-520_SHP099_60min_R1 2 EIAEAYLGK 9 0 E9PKE3;P11142;P11142-2;E9PN89;E9PLF4;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PI65 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ; 138.1 0.0033841 624180000.0 615150.0 862430.0 519560.0 463170.0 760400.0 839010.0 622090.0 726100.0 706740.0 779670.0 False True 581026.4032288769 820997.5682661775 553051.6689253921 507189.5375428623 820239.1539158303 833773.4273750437 684976.9282133254 723581.3285730134 578413.8314655713 772762.7303740804 0.7518820206916715 1.062418690752267 0.7156810844871748 0.6563328142097913 1.0614372583920648 1.078951396855577 0.8864000569511686 0.9363564003956828 0.7485012006021198 1.0 19.559665990451755 -5.7725266445297665 24.999852976648093 0.9518323160440422 0.80978880527888 0.24545183759157507 0.13264132273914475 364.9302252457875 822851.5276341136 0.04309119037072678 0.04931100400809817 1.6883922712533785e-06 5.7725266445297665 -0.1420435107651622 EIAIVHS(ph)DAEK ddPTM_KYSE-520_SHP099_60min_R1 9 EIAIVHSDAEK 11 0 Q9H307 Q9H307 PNN Pinin 1 EIAIVHS(1)DAEK;EIAIVHS(1)DAEK;EIAIVHS(1)DAEK;EIAIVHS(1)DAEK;EIAIVHS(1)DAEK;EIAIVHS(1)DAEK;EIAIVHS(1)DAEK;EIAIVHS(1)DAEK;EIAIVHS(1)DAEK 215.34 1.0769e-09 4461210000.0 6262650.0 4740530.0 4306250.0 5188810.0 5275310.0 5756910.0 6209190.0 6189160.0 5357630.0 5547410.0 True False 5915248.3202167405 4512787.823119399 4583837.765243614 5681952.942327384 5690446.884591944 5720978.98927267 6836875.521054658 6167691.248520804 4384819.446861494 5498264.263219675 1.0758392170755517 0.8207659012149409 0.8336881506236313 1.0334084849897964 1.0349533256627665 1.0405063698998305 1.2434606984588839 1.1217524209920615 0.7974915786048142 1.0 22.390544818131083 -5.3765679044699555 5.902429083496417 1.0539773666442322 0.9018739958874095 0.1801604880821882 0.12302821370430071 0.3474554798227137 15.623455156058885 0.03568582123731058 0.053293977254341825 4.201768254487828e-06 5.3765679044699555 -0.1521033707568228 EIAIVHS(ph)DAEKEQEEEEQKQEMEVK ddPTM_KYSE-520_SHP099_60min_R1 17 EIAIVHSDAEKEQEEEEQKQEMEVK 25 2 Q9H307 Q9H307 PNN Pinin 1 EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK;EIAIVHS(1)DAEKEQEEEEQKQEMEVK 279.58 6.0665e-39 23103956000.0 11818423.0 10308763.0 9408230.0 11174311.0 10555780.0 9634764.0 11784202.0 12199086.0 11559641.0 9760038.0 True False 11162831.516747843 9813514.551711276 10014699.559500244 12236314.15776089 11386459.831827521 9574629.86404176 12975464.140888477 12156770.217954084 9460701.589235798 9673571.656514673 1.1539513959386685 1.01446651765921 1.035263904077853 1.2649220569447415 1.1770688465577555 0.9897719481504766 1.3413312684927643 1.2566992471459184 0.9779946771639907 1.0 23.20561722632403 -5.219265969699074 24.963377928498232 1.157843233852343 1.062551174721577 0.06580610599011039 0.12336716073912359 1126.5030949754903 666800.6262442734 0.03320579671924573 0.05751350507655765 6.0357887368069815e-06 5.219265969699074 -0.095292059130766 EIAQDFK ddPTM_KYSE-520_SHP099_60min_R1 8 EIAQDFK 7 0 Q71DI3;P68431;K7EK07;Q16695;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00 Q71DI3 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3 0 ;;;;;;; 134.81 0.013899000000000002 25888180000.0 25906250.0 43440400.0 14845650.0 30931970.0 34195820.0 37648900.0 38862900.0 24081820.0 33603430.0 24113030.0 False True 24469178.669670995 41353457.97863026 15802624.352879826 33871735.12876414 36886836.48639933 37413919.24994966 42791541.19735348 23998285.78715907 27501894.185535207 23899407.313853443 1.0238403968908167 1.7303131176252837 0.6612140688409346 1.417262557349285 1.543420554409215 1.5654747734376844 1.7904854557857213 1.0041372772139128 1.1507354062957686 1.0 24.510471505180455 EIAQDFKTDLR ddPTM_KYSE-520_SHP099_60min_R1 4 EIAQDFKTDLR 11 1 Q71DI3;P68431;K7EK07;Q16695;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00 Q71DI3 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3 0 ;;; 148.13 7.0539e-05 12218590000.0 19692400.0 16282800.0 6337510.0 28250500.0 15339400.0 13914800.0 23732000.0 18513100.0 22966500.0 10230000.0 False True 18600023.316173855 15500549.847018937 6746036.034974515 30935419.026177466 16546523.510752855 13827952.571767002 26131062.162000056 18448882.377090015 18796362.538350817 10139370.158819566 1.83443577114057 1.5287487885562632 0.6653308765048475 3.051019791329819 1.6319084175421026 1.36378812048192 2.5771879074037334 1.8195294271846418 1.8537998163526073 1.0 23.27346470146704 -3.9173197803699353 17.835777098536077 1.7631143980371353 3.962564197877974 0.0 0.6596892033736939 2908.973187143405 667542.0880266962 0.1560679302783994 16211.895036573147 0.00012097070721954202 3.9173197803699353 2.1994497998408384 EIAQEFKTDLR ddPTM_KYSE-520_SHP099_60min_R1 2 EIAQEFKTDLR 11 1 Q5TEC6;A0A590UJL8 Q5TEC6 HIST2H3PS2 Histone H3 0 ; 78.692 0.013567 874500000.0 1138850.0 1578370.0 577520.0 1418850.0 1609170.0 1430480.0 1506980.0 976490.0 1356220.0 930580.0 False True 1075675.720258809 1502542.7360183292 614747.8632646719 1553697.0774071917 1735802.5240751407 1421551.8437103862 1659320.2451074875 973102.7841044791 1109964.6355240084 922335.7851802843 1.1662517464271995 1.6290626040543734 0.6665119939421089 1.6845243374174173 1.8819637619675054 1.5412519676145089 1.7990413814239556 1.055041775175482 1.203427920024863 1.0 19.81493254767492 -7.293167931595827 24.760956603109715 1.0969259852367177 1.4811207255235639 0.22717836779825018 0.33374328655075164 1022.1914301227682 797712.3179394173 0.18937130918860529 0.09098355648840094 5.0913396270373646e-08 7.293167931595827 0.3841947402868462 EIDCLS(ph)PEAQK ddPTM_KYSE-520_SHP099_60min_R1 4 EIDCLSPEAQK 11 0 Q32MZ4-2;Q32MZ4;C9JTC6;Q32MZ4-3 Q32MZ4-2;Q32MZ4-3 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 EIDCLS(1)PEAQK;EIDCLS(1)PEAQK;EIDCLS(1)PEAQK;EIDCLS(1)PEAQK 225.13 4.5470999999999997e-10 3998440000.0 4975770.0 4711990.0 4259180.0 3632880.0 3897500.0 4218960.0 3648380.0 4203480.0 4936200.0 4279240.0 True False 4699754.119148417 4485618.927558815 4533733.557728949 3978147.8229347975 4204211.076258478 4192627.905696253 4017193.855157499 4188899.1089796084 4039910.5114757316 4241329.262798339 1.1080851846073416 1.0575974298678474 1.068941663524064 0.9379483592155965 0.99124845437834 0.9885174307193604 0.9471544429226982 0.9876382731520971 0.9525104657425922 1.0 22.016085055882016 -5.212151869898447 7.934043249776344 0.9721042314857737 1.0766426690781694 0.8185650215826084 0.022880888168489235 0.12248427634967765 17.992689066653316 0.005931739908822219 0.010272210113840916 6.135474141870735e-06 5.212151869898447 0.10453843759239567 EIEDPEDRKPEDWDERPK ddPTM_KYSE-520_SHP099_60min_R1 4 EIEDPEDRKPEDWDERPK 18 3 P27824;P27824-2;P27824-3;D6RGY2 P27824 CANX Calnexin 0 ;;; 134.21 4.8553e-06 5659610000.0 4927190.0 6267170.0 3851760.0 4249290.0 5969980.0 6026530.0 4576090.0 6235010.0 7812490.0 3970850.0 False True 4653868.948590251 5966085.745986051 4100050.612633902 4653141.244004375 6439783.461460314 5988916.190842205 5038685.835534588 6213382.205572273 6393938.752846118 3935671.358274552 1.1824841367421912 1.5159003897626397 1.0417665092929447 1.1822992370085421 1.6362604687307012 1.5217012920173856 1.2802608187650129 1.5787350212839666 1.6246119583646592 1.0 21.908178325168326 -5.741965406318905 24.9999497571137 1.4652703242754834 1.237501215306075 0.1863782114856548 0.21054298692662932 383.1926015038982 491926.0858117018 0.06040434728199627 0.07786678703970458 1.8114843804699445e-06 5.741965406318905 -0.2277691089694085 EIEELKELLPEIR ddPTM_KYSE-520_SHP099_60min_R1 1 EIEELKELLPEIR 13 1 P49321-4;P49321;P49321-3;Q5T624;P49321-2;H0YF33;H0YDS9;E9PRH9 P49321-4 NASP Nuclear autoantigenic sperm protein 0 86.772 0.0034847000000000003 24110000.0 61350.0 67195.0 50650.0 40554.0 67442.0 53950.0 35846.0 37715.0 58736.0 42463.0 False True 57946.793201807086 63966.85133824872 53914.98004286535 44408.2399669953 72749.30170751098 53613.27803826361 39469.66350324688 37584.17546774718 48071.023014067156 42086.8108557141 1.3768397277823126 1.5198787942746672 1.2810421827327727 1.0551581140048776 1.7285534405758818 1.2738736185563124 0.9378154985076068 0.8930155244263275 1.1421873512552112 1.0 15.361080572598306 -6.653351948166797 4.802780613835978 0.9857417893907278 1.3851889835784492 0.5466303950007021 0.1713943551433429 0.16689666478883758 6.336104297005401 0.06839708850961292 0.05195513137401757 2.2215088710730902e-07 6.653351948166797 0.39944719418772145 EIEGEEIEIVLAKPPDKK ddPTM_KYSE-520_SHP099_60min_R1 1 EIEGEEIEIVLAKPPDKK 18 2 B4DT28;O43390-4;O43390-3;O43390;O43390-2;A0A286YEZ8 B4DT28 HNRNPR Heterogeneous nuclear ribonucleoprotein R 0 137.14 5.620599999999999e-06 50726000.0 181050.0 160040.0 111570.0 148430.0 151090.0 138870.0 136310.0 152730.0 132970.0 133730.0 False True 171006.7955857728 152351.43817506245 118761.9807183117 162536.7425728934 162979.92341549537 138003.2608187889 150089.54505740074 152200.21527744984 108825.99990092128 132545.25624036565 1.2901766569122524 1.1494295797261809 0.8960107972701903 1.2262735550349637 1.2296171740762842 1.04117842262514 1.1323645169557726 1.1482886645255768 0.8210478668777823 1.0 17.016125511892326 -7.749295608424666 24.99878304341951 0.9105239389416291 1.1338297670967739 0.40260782267153894 0.11125380657725353 196.75016474006975 405029.0007023316 0.07675789373896949 0.0285333711447455 1.781165979982165e-08 7.749295608424666 0.22330582815514477 EIEHVMYHDWR ddPTM_KYSE-520_SHP099_60min_R1 5 EIEHVMYHDWR 11 0 C9JJ19;P82930 C9JJ19 MRPS34 28S ribosomal protein S34, mitochondrial 0 ;;;; 199.82 4.118899999999999e-07 4065030000.0 1794550.0 2172300.0 1293430.0 1466970.0 2306660.0 2089660.0 1737880.0 1660630.0 1818830.0 1406860.0 False True 1695002.7341532672 2067939.4473112253 1376806.567361173 1606390.3877393883 2488181.018899908 2076617.6568199825 1913561.870474328 1654869.6621239572 1488576.3209730978 1394396.3149205162 1.2155817653963652 1.4830356514740952 0.9873854030083651 1.1520328693861732 1.7844145113376464 1.4892592834615705 1.372322810953072 1.186800082886255 1.067541777789301 1.0 20.411209231183168 -7.561315401201326 2.3340924495693844 1.0209701043533186 1.3591310149503095 0.28793651333637416 0.20426540242293031 0.4406732053720262 4.4486573238698615 0.18863475138867486 0.06066529788738746 2.7458992521355488e-08 7.561315401201326 0.33816091059699094 EIEMSVDDDDINS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 EIEMSVDDDDINSSK 15 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 EIEMSVDDDDINS(0.811)S(0.189)K 332.36 3.5563e-54 358460000.0 1214900.0 1101000.0 1051000.0 1068000.0 969030.0 994750.0 1022700.0 1245100.0 1228600.0 1343700.0 True False 1147507.0751568943 1048106.3073653079 1118749.1416594575 1169502.3988940904 1045287.1479735093 988541.3962662219 1126084.4965901528 1240781.0387085245 1005517.2104856117 1331795.86338278 0.8616238469476923 0.7869872074111294 0.8400304974801612 0.8781393838568758 0.7848703969679448 0.7422619512838199 0.8455383648135703 0.9316600785625835 0.7550085100366538 1.0 20.34494153352384 -10.463618736556711 3.3416514203801793 1.002792177548433 0.8261131938820385 0.4702359522521352 0.05567550875424064 36265988.741296895 62227667.4234579 994631.9114998122 0.014435533751308419 3.438596869370073e-11 10.463618736556711 -0.17667898366639445 EIEMSVDDDDINSS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 6 EIEMSVDDDDINSSK 15 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 EIEMSVDDDDINS(0.141)S(0.859)K;EIEMSVDDDDINS(0.21)S(0.79)K;EIEMSVDDDDINS(0.2)S(0.8)K;EIEMSVDDDDINS(0.016)S(0.984)K;EIEMSVDDDDINS(0.025)S(0.975)K;EIEMSVDDDDINS(0.015)S(0.985)K 337.85 5.6595e-47 1408980000.0 2715890.0 2470910.0 2487810.0 2345610.0 2337900.0 2259590.0 2320640.0 2746240.0 2880900.0 2865640.0 True False 2565234.1677075103 2352203.774688474 2648178.213236742 2568536.069166639 2521879.42916862 2245487.0606576498 2555232.938463844 2736713.9344172324 2357801.181579031 2840252.659034187 0.9031711173821433 0.8281670883069707 0.9323741691829773 0.904333655316445 0.8879067223639787 0.7905941232077628 0.8996498710550411 0.9635459457145047 0.8301378309001527 1.0 21.437587841914134 -10.394671524769077 3.4436323051408753 1.0009592822680924 0.8831239160189737 0.3381097061428411 0.04942727668906621 68953326.53433077 90267847.81891106 646241.4911040609 0.012355898523427524 4.030217414180398e-11 10.394671524769077 -0.11783536624911872 EIES(ph)SPQYR ddPTM_KYSE-520_SHP099_60min_R1 2 EIESSPQYR 9 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7;H3BSK9 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EIES(0.5)S(0.5)PQYR;EIES(0.5)S(0.5)PQYR 126.19 0.00084082 1661470000.0 2117980.0 1927150.0 1751960.0 1748490.0 1822070.0 1726520.0 1678070.0 1706040.0 2137540.0 1788820.0 True False 2000491.4273115473 1834566.8212888779 1864894.1448351115 1914665.963897312 1965456.5428398433 1715744.1482599252 1847705.6919849785 1700122.1454327276 1749416.6189983846 1772972.4464809026 1.1283262925389717 1.034740740009937 1.051846095260341 1.0799186234944884 1.108565757319576 0.9677218344060747 1.0421513857434224 0.9589106411705538 0.9867139348221271 1.0 20.757738685011287 -6.264762455922198 24.99901307860253 0.9917222119544029 1.0764832219777225 0.6582763794546451 0.03219867087802619 193.41448962562686 1455026.4734292915 0.011079010238589891 0.010171306469296561 5.435475519330522e-07 6.264762455922198 0.0847610100233196 EIESEIDS(ph)EEELINK ddPTM_KYSE-520_SHP099_60min_R1 8 EIESEIDSEEELINK 15 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 EIESEIDS(1)EEELINK;EIESEIDS(1)EEELINK;EIESEIDS(1)EEELINK;EIESEIDS(1)EEELINK;EIESEIDS(1)EEELINK;EIESEIDS(1)EEELINK;EIESEIDS(1)EEELINK;EIESEIDS(1)EEELINK 431.82 2.9856999999999994e-113 2992490000.0 5463930.0 5082510.0 4006800.0 3415780.0 3868470.0 4334210.0 3898550.0 4256550.0 5216450.0 4546220.0 True False 5160834.910825587 4838338.590596963 4265084.73910667 3740414.7042082995 4172896.5804165863 4307158.587696429 4292653.480181417 4241785.021536241 4269274.176003317 4505944.027705636 1.1453393293598928 1.073768018609982 0.9465463203453044 0.8301067836639033 0.9260870873581106 0.9558837307372356 0.9526646256116894 0.9413754355257935 0.9474760782097803 1.0 22.10339796202467 -4.664195543056039 3.126243864001232 0.9314470665730796 1.1331665487139964 0.7477206267377958 0.0408820480674421 0.11975261032488618 2.2453231065298165 0.011344921755911862 0.037648409608070976 2.166728305931164e-05 4.664195543056039 0.20171948214091673 EIESEIDS(ph)EEELINKK ddPTM_KYSE-520_SHP099_60min_R1 4 EIESEIDSEEELINKK 16 1 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 1 EIESEIDS(1)EEELINKK;EIESEIDS(1)EEELINKK;EIESEIDS(1)EEELINKK;EIESEIDS(1)EEELINKK 228.01 1.1738e-18 520730000.0 418377.0 410749.0 333787.0 354105.0 396687.0 381473.0 328191.0 357650.0 475440.0 373486.0 True False 395168.79379612766 391016.00149318157 355303.4440980825 387759.03273444995 427904.0100597171 379092.08550677507 361367.749115497 356409.3956261377 389112.08086706797 370177.20460771077 1.067512501789248 1.056294111647297 0.9598198907861155 1.047495707212364 1.155943706780058 1.024082738721072 0.9762020584126744 0.9628075181015987 1.0511508434978407 1.0 18.49785653168752 -9.933479104426349 4.516860957599463 0.9999995133089735 1.0319580283127907 0.03088929845989974 0.05567319816366412 2.933834823908502e-07 6.922513483179057e-08 0.05796491927973691 0.014058343830383546 1.1655231272772255e-10 9.933479104426349 0.03195851500381719 EIESS(ph)PQYR ddPTM_KYSE-520_SHP099_60min_R1 1 EIESSPQYR 9 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7;H3BSK9 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EIES(0.349)S(0.651)PQYR 157.97 7.0275e-05 901400000.0 1632100.0 1512300.0 1497700.0 1300300.0 1375600.0 1367600.0 1259400.0 1405700.0 1684700.0 1336700.0 True False 1541564.1594893134 1439646.8379914202 1594244.1384047265 1423880.1210505494 1483851.8939066492 1359064.3011145387 1386712.4425595363 1400823.954792845 1378800.9478309562 1324857.8779368645 1.1635694553818217 1.0866424708386917 1.2033321950633407 1.0747417853361656 1.1200083560792031 1.025818937825197 1.046687698094074 1.0573390384893804 1.0407161181530615 1.0 20.33740617443933 -5.971066780410497 1.3314691981039541 1.0365160207013215 1.141826549958468 0.6271984489566923 0.03680383881602791 0.28368335878524836 1.0442684973618388 0.014712777438981516 0.01706313760341367 1.068890505881406e-06 5.971066780410497 0.10531052925714657 EIEVGGGRK ddPTM_KYSE-520_SHP099_60min_R1 5 EIEVGGGRK 9 1 P62081;B5MCP9 P62081 RPS7 40S ribosomal protein S7 0 ;;;; 115.71 0.0020636999999999995 3046600000.0 3590970.0 3765370.0 2785400.0 2094420.0 3126490.0 3049420.0 2182900.0 2644860.0 3268960.0 2685110.0 False True 3391771.7356787766 3584475.973264402 2964951.3407975775 2293473.047089663 3372526.97570529 3030387.4386550826 2403568.8350509866 2635685.5979749644 2675399.2677755523 2661322.0143839684 1.2744687479932373 1.3468779628661813 1.1140896609927498 0.8617796097931224 1.267237469752772 1.1386774776883 0.903148443540514 0.9903670370325561 1.0052895716172259 1.0 21.34371165332121 -4.886856421363062 4.579326033596259 1.0303326903986973 1.3084436893967746 0.5166489302037678 0.10917134914177598 0.16936346112483405 5.958203019064189 0.030179961428028472 0.0669064654080063 1.2976081919802016e-05 4.886856421363062 0.27811099899807723 EIFDSR ddPTM_KYSE-520_SHP099_60min_R1 1 EIFDSR 6 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798 P06733 ENO1 Alpha-enolase;Enolase 0 123.99 0.05914199999999999 2867500000.0 5389100.0 5963800.0 4760600.0 3593100.0 6052400.0 6010500.0 4389400.0 4896700.0 5029500.0 5139600.0 False True 5090155.880095487 5677290.096153694 5067475.893229318 3934587.1436950937 6528689.446554661 5972986.240018231 4833123.38841577 4879714.490598374 4116269.5833773315 5094067.142548288 0.9992321925990861 1.1144906294489183 0.9947799570412281 0.7723861962539487 1.2816261081491573 1.172537792077524 0.9487749676573791 0.9579211176547852 0.8080516939001677 1.0 22.280386544559185 -6.976509632931569 24.22425442484129 0.9204614104821891 1.0537398213832996 0.18281676043554274 0.13255510139436788 292.2849612291123 301415.4639778962 0.05830887963307886 0.03930893132520313 1.05557808955378e-07 6.976509632931569 0.13327841090111048 EIHKPGYLANDR ddPTM_KYSE-520_SHP099_60min_R1 2 EIHKPGYLANDR 12 1 A0A2R8Y7M3;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y5P0;E9PNV3;P35241-3 A0A2R8Y7M3 RDX Radixin 0 ; 160.31 3.7537e-06 1887300000.0 2493300.0 2165200.0 1411930.0 1356320.0 2237500.0 2059940.0 1708780.0 1982460.0 1958430.0 1715050.0 False True 2354991.6787296752 2061180.541968542 1502945.266967876 1485224.245007522 2413578.5203664755 2047083.150364056 1881520.1584856932 1975583.3089696406 1602828.4800027183 1699855.9912887113 1.3854065819683268 1.2125618596701828 0.8841603492707925 0.8737353355924753 1.4198723496198462 1.2042685738408354 1.1068703279148118 1.1622062804696134 0.9429201580703118 1.0 20.696981098361313 -1.0000944630172799 0.018113333165815537 0.002589837756371491 2.520199274923389 0.1042914423264506 0.1745120902456132 12083.528723749194 16.91869221258917 897.2213447638387 1532.76630808399 0.09997825145179691 1.0000944630172799 2.5176094371670175 EIHQDWANR ddPTM_KYSE-520_SHP099_60min_R1 3 EIHQDWANR 9 0 Q8WUW1;Q8WUW1-2 Q8WUW1 BRK1 Protein BRICK1 0 ;; 195.79 5.7085000000000005e-06 3195050000.0 1431370.0 1410630.0 975180.0 799120.0 1419270.0 1293000.0 957790.0 1063800.0 1106280.0 1105160.0 False True 1351969.0527346465 1342861.2174012042 1038041.6631431674 875068.1245358113 1530958.4744583361 1284929.9073860035 1054612.7603296004 1060109.9260927874 905407.4390493436 1095369.1422014702 1.2342588453947703 1.2259439906279677 0.9476637812316986 0.7988796569320015 1.3976644178431206 1.1730565139013818 0.9627921033178297 0.9678106541893092 0.8265774560981861 1.0 20.062985713010335 -6.853932990872903 5.476481458962967 0.931709006289586 1.122473104847841 0.25506634508400294 0.1594072199796339 0.3398924156385506 15.969736542269464 0.07287133566630793 0.04888700425057424 1.3998032874635227e-07 6.853932990872903 0.19076409855825494 EIHQFNR ddPTM_KYSE-520_SHP099_60min_R1 6 EIHQFNR 7 0 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ;;;;; 213.97 8.483e-07 6082790000.0 3336040.0 3067470.0 2347470.0 2125360.0 3476990.0 3119310.0 2371810.0 2837180.0 2789490.0 2539010.0 False True 3150983.210969135 2920104.136833659 2498791.6722847973 2327353.5753872143 3750609.331633086 3099841.2292407057 2611575.7014349145 2827338.4847827875 2282988.9333204557 2516516.3467198876 1.2521210979122919 1.1603755885153781 0.9929566623089124 0.9248314951026507 1.4903973648022422 1.2317985668088918 1.037774185269621 1.123512862719146 0.907202107507142 1.0 21.262996538609464 -7.4628689513570645 1.7623803436898378 0.9626215156131491 1.161668799121095 0.20834291149406148 0.1512163007617004 0.6716069224770467 3.7233021909485737 0.1383259056431573 0.046753154864712536 3.4445385425805496e-08 7.4628689513570645 0.19904728350794587 EIIDLVLDR ddPTM_KYSE-520_SHP099_60min_R1 12 EIIDLVLDR 9 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VRZ4;F8VS66;P68363;Q71U36-2;Q71U36 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1A;TUBA1B Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain 0 ;;;;;;;;;;; 159.28 0.0011315 2336818500.0 1358243.0 1642428.0 1620348.0 793419.0 1396356.0 1521777.0 1152069.0 1202921.0 1411491.0 1414279.0 False True 1282898.5531997064 1563523.29354531 1724798.2247284648 868825.3032098798 1506241.2730211646 1512279.0252684846 1268531.3776299204 1198748.347814871 1155199.8151925337 1401749.588352411 0.9152123630780589 1.1154084199753855 1.2304610174744255 0.6198149158945572 1.0745437598391385 1.0788510571606358 0.9049629036245534 0.8551800961995333 0.8241128264216813 1.0 20.418797215456546 -6.910543190589804 7.006289597619556 0.8798371635711315 1.0062103962870828 0.10276344085481548 0.15745781480473098 0.49905399827121066 32.83868668734252 0.06754294158312918 0.04536632747274215 1.2287309831956388e-07 6.910543190589804 0.12637323271595124 EIIEQMEMKLDTGIDRT(ph)LNCMIGQMK ddPTM_KYSE-520_SHP099_60min_R1 1 EIIEQMEMKLDTGIDRTLNCMIGQMK 26 2 F8W9B8;O00471 F8W9B8 EXOC5 Exocyst complex component 5 1 EIIEQMEMKLDT(0.03)GIDRT(0.97)LNCMIGQMK 41.133 0.060827 1672400000.0 1694400.0 1443800.0 1453600.0 1294200.0 1388600.0 1481000.0 1483300.0 1530100.0 1699700.0 1392500.0 True False 1600408.254297342 1374437.6808120182 1547301.3818422316 1417200.3788845812 1497874.9199467667 1471756.529650945 1633246.4396129583 1524792.4402280245 1391077.325950183 1380163.5333486057 1.1595787134111346 0.9958513231235032 1.1211000323187135 1.0268351138405427 1.0852879993956694 1.0663638721710846 1.1833716803474101 1.1047911377056272 1.007907608292691 1.0 20.396407789061744 -7.7694680899271695 23.501890769393825 1.0039536094516357 1.0902783217363705 0.3088759003917714 0.05310281237909346 116.11735928756416 339872.3938011768 0.04691277239092606 0.013041816730839519 1.7003248815422336e-08 7.7694680899271695 0.08632471228473482 EIIKQEES(ph)VDPDYWEK ddPTM_KYSE-520_SHP099_60min_R1 3 EIIKQEESVDPDYWEK 16 1 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 EIIKQEES(1)VDPDYWEK;EIIKQEES(1)VDPDYWEK;EIIKQEES(1)VDPDYWEK 202.47 7.3296e-13 967760000.0 1900100.0 1989700.0 2109680.0 1844610.0 1692060.0 1349780.0 1467360.0 1882170.0 2657410.0 1726120.0 True False 1794697.6652445586 1894111.825399413 2245673.3484073468 2019921.1797977807 1825215.495495552 1341355.5223445313 1615695.068853549 1875641.1915717782 2174891.3318546084 1710827.9197010403 1.0490228997187363 1.1071317013171031 1.3126237434795713 1.1806688191941321 1.066860947543164 0.7840388310818117 0.9443936764463633 1.0963353882484792 1.2712507826238078 1.0 20.70626322577402 -4.223858662922456 19.209439868656986 1.0835885140086028 1.0490211847780142 0.005290926678658825 0.14635152303998644 8519.247809397095 4352848.398927508 0.04056205514960824 4.538488989791049 5.9722961775420144e-05 4.223858662922456 -0.034567329230588584 EIKHS(ph)PGPTR ddPTM_KYSE-520_SHP099_60min_R1 8 EIKHSPGPTR 10 1 Q96CV9-3;Q96CV9-2;Q96CV9;A0A087WY28;H7C1H4 Q96CV9-3 OPTN Optineurin 1 EIKHS(0.928)PGPT(0.072)R;EIKHS(0.997)PGPT(0.003)R;EIKHS(0.5)PGPT(0.5)R;EIKHS(0.971)PGPT(0.029)R;EIKHS(0.984)PGPT(0.016)R;EIKHS(0.996)PGPT(0.004)R;EIKHS(0.994)PGPT(0.006)R;EIKHS(0.912)PGPT(0.088)R 100.69 0.0031879 50650700000.0 17733040.0 15405690.0 14247470.0 14670924.0 15350410.0 14062930.0 14501090.0 14482710.0 18864790.0 13686110.0 True False 16749352.92126115 14665577.527987858 15165884.712958002 16065244.205985859 16558399.93511454 13975158.037490992 15967001.694200143 14432472.859299932 15439419.678656073 13564861.713032475 1.2347603149665114 1.0811446396020292 1.118027226063598 1.184327901444888 1.2206832834282428 1.0302469964779901 1.1770854751036501 1.0639601910157255 1.1381921913603152 1.0 23.693371004353306 -13.999999999990953 0.1405184158889537 0.5128803522944366 1.1860124923449902 0.3572646159587848 0.061008858415868304 158.25703672808027 1.3586361402559073 21.39737072637019 0.364800515903581 1.0000000000208314e-14 13.999999999990953 0.6731321400505536 EIKHSPGPT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 EIKHSPGPTR 10 1 Q96CV9-3;Q96CV9-2;Q96CV9;A0A087WY28;H7C1H4 Q96CV9-3 OPTN Optineurin 1 EIKHS(0.078)PGPT(0.922)R 80.96 0.026271 9674400000.0 4321800.0 3549500.0 3609800.0 3277600.0 3626600.0 3412200.0 3027100.0 3488100.0 4329100.0 3372300.0 True False 4082061.1387052946 3378976.692091882 3842493.4838842154 3589102.1185536264 3911992.7874686294 3390903.1941086785 3333108.809649017 3476000.5952286576 3543044.5677301483 3342424.0456096954 1.2212876292782537 1.0109359692197641 1.1496128053923516 1.0738021476562631 1.1704058892847746 1.014504188528281 0.9972130298748557 1.0399639745873706 1.0600224625549741 1.0 21.672463345718413 -6.279591091819056 24.445225235661574 1.0232679877461082 1.1173602361776798 0.4590606459058463 0.05550235960987658 603.2443949684321 812397.2154348722 0.018405955315150824 0.016269330907738792 5.253018232489335e-07 6.279591091819056 0.0940922484315716 EIKLS(ph)DDFDS(ph)PVKGPLCK ddPTM_KYSE-520_SHP099_60min_R1 1 EIKLSDDFDSPVKGPLCK 18 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 EIKLS(1)DDFDS(1)PVKGPLCK 74.579 0.009079899999999998 70753000.0 194690.0 161360.0 160960.0 167790.0 183430.0 232760.0 276690.0 311280.0 386510.0 272880.0 True False 183890.1575951071 153608.02339370217 171335.73914510565 183736.71115209706 197864.89742606616 231307.258502062 304660.5254341737 310200.2423332984 316329.52712420136 270462.4954974275 0.6799100084353699 0.5679457446075484 0.6334916744371136 0.679342660113275 0.7315797965339271 0.8552285893711356 1.1264427804448454 1.1469251652166645 1.169587400805485 1.0 18.04506902667303 -6.4810408608950105 1.625836799454305 1.1337762172652361 0.6371663447107189 0.9313909437094476 0.057800007268963956 0.08419288247618602 0.4476867796089191 0.027078442017799766 0.02080914918961466 3.3033845945352775e-07 6.4810408608950105 -0.4966098725545173 EIKLS(ph)DDFDSPVK ddPTM_KYSE-520_SHP099_60min_R1 1 EIKLSDDFDSPVK 13 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 EIKLS(1)DDFDSPVK 104.88 0.00082456 0.0 95411.0 97553.0 93009.0 120870.0 115090.0 167340.0 197900.0 258640.0 295550.0 259010.0 True False 90118.36163288681 92866.40744996163 99004.50895966165 132357.44845910938 124146.92822747621 166295.56898837886 217905.66331787553 257742.83820702968 241885.57020919945 256715.37290673086 0.3510438841760691 0.3617485248290978 0.3856586687375037 0.5155805317011425 0.4835975610723591 0.647781888187884 0.8488220274874011 1.0040023520549823 0.9422325101546632 1.0 17.969810165956826 -6.569435931516246 0.9630575664942643 1.014139319944457 0.37569213675847846 0.975742388329816 0.040033353951989634 0.07893146694909295 0.1497608751738503 0.028618409927904317 0.01943431408911818 2.695032882727281e-07 6.569435931516246 -0.6384471831859786 down EILDAFDK ddPTM_KYSE-520_SHP099_60min_R1 4 EILDAFDK 8 0 A0A0J9YXB8;C9JIZ6;P07602;P07602-2;P07602-3 A0A0J9YXB8 PSAP Prosaposin;Saposin-A;Saposin-B-Val;Saposin-B;Saposin-C;Saposin-D 0 ;;; 121.09 0.0070628 358594000.0 468037.0 587330.0 527576.0 324683.0 493242.0 538465.0 382487.0 448603.0 486361.0 465883.0 False True 442074.05460137164 559113.7851996969 561584.393111446 355540.7747004969 532057.3392369176 535104.2402015494 421152.5186733917 447046.9008977275 398050.1025630745 461755.6390714892 0.9573766234675686 1.2108434372863925 1.2161939034262694 0.7699760319450087 1.1522487095269545 1.1588472233442595 0.9120679490135879 0.9681460562055324 0.8620362565868919 1.0 18.816770054292704 -6.7762237506502965 24.927158633038307 0.9329080259393302 1.079350906014397 0.2220347303553436 0.13016942033616677 372.1765878469064 627501.5961983463 0.05526587771367708 0.037435463992963255 1.674080159486505e-07 6.7762237506502965 0.1464428800750669 EILDEAYVMASVDNPHVCR ddPTM_KYSE-520_SHP099_60min_R1 1 EILDEAYVMASVDNPHVCR 19 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 0 116.82 6.312e-05 69617000.0 68345.0 45792.0 39550.0 67460.0 55047.0 37356.0 33688.0 45114.0 49832.0 25367.0 False True 64553.76660762023 43592.08358480667 42099.45628223742 73871.37811741146 59378.88572541385 37122.8473474954 37093.51180319647 44957.51006368677 40783.76496249309 25142.26811522736 2.5675395040642086 1.7338166701995044 1.6744494207640708 2.938135007504411 2.361715556181312 1.4765114737207032 1.4753446917834299 1.788124677441426 1.6221195627848901 1.0 14.61782718248972 -6.2656377488269275 24.740232070308465 1.521860627932809 2.2318538742662652 0.4954317934714414 0.3930178097094524 318.75508177964934 1878358.8733011892 0.1423278196135933 0.13003036947621718 5.424531696142052e-07 6.2656377488269275 0.7099932463334562 EILFYDR ddPTM_KYSE-520_SHP099_60min_R1 1 EILFYDR 7 0 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 0 101.33 0.037017 139820000.0 185100.0 177600.0 136760.0 90021.0 166080.0 185330.0 123600.0 142470.0 153280.0 163710.0 False True 174832.13401229784 169067.82941696516 145575.76842373688 98576.56877419952 179149.55113406217 184173.28672532688 136094.69421975422 141975.804822748 125448.21587435661 162259.65676445252 1.077483691871088 1.041958505202534 0.8971778402999142 0.6075235874392374 1.1040917669025283 1.1350528553914403 0.8387463460330057 0.8749914036170434 0.7731325110373309 1.0 17.307944816153423 EILS(ph)PLFPR ddPTM_KYSE-520_SHP099_60min_R1 6 EILSPLFPR 9 0 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 EILS(1)PLFPR;EILS(1)PLFPR;EILS(1)PLFPR;EILS(1)PLFPR;EILS(1)PLFPR;EILS(1)PLFPR 123.51 0.00070084 430380000.0 350350.0 366426.0 329317.0 289640.0 333714.0 309908.0 273876.0 328562.0 404520.0 326590.0 True False 330915.38709458994 348822.34494336066 350545.3007458301 317167.29851655854 359975.39322707447 307973.7492174645 301562.0588521798 327422.2951089472 331069.36511935503 323696.666683175 1.0223008796642332 1.077621059610039 1.0829438076634066 0.9798287445047829 1.1120763056216703 0.9514270022400333 0.9316192901897876 1.0115096286407506 1.022776565825425 1.0 18.304282983683578 -6.2761292614603645 24.95597585214158 0.980945398214685 1.0535947806034067 0.4193878129378883 0.04198922942900086 804.7381504672031 1367129.79578148 0.014903574653721528 0.013199742834501305 5.295058206997816e-07 6.2761292614603645 0.07264938238872176 EILS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 4 EILSPLR 7 0 A0A140T9S5;Q9Y334-2;Q9Y334 A0A140T9S5 VWA7 von Willebrand factor A domain-containing protein 7 1 EILS(1)PLR;EILS(1)PLR;EILS(1)PLR;EILS(1)PLR 74.464 0.022456999999999998 3249790000.0 1836520.0 1564860.0 1507030.0 1880480.0 2085030.0 3367500.0 4145420.0 5095110.0 4567540.0 4603770.0 True False 1734644.574588145 1489681.7766972538 1604175.5651332561 2059200.2538130702 2249109.9988021073 3346482.1833893005 4564479.50900044 5077436.25261761 3738189.8743134076 4562984.179478866 0.38015572843521384 0.3264709492960348 0.35156281548108886 0.4512836715660604 0.4929033085227519 0.7333977177566061 1.000327708679837 1.112744654134983 0.8192423482696235 1.0 22.121546221085616 -6.368844201300543 1.6198211307282357 1.0002243326323241 0.3688464236286033 0.9306502656327014 0.07554119240846094 0.08842147355186684 0.4620183918807656 0.03431394723825229 0.028757237597093716 4.277162974757056e-07 6.368844201300543 -0.6313779090037208 down EILSDDKHDWDQR ddPTM_KYSE-520_SHP099_60min_R1 1 EILSDDKHDWDQR 13 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;C9J668;D6RBU8;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 0 140.74 1.1689000000000001e-05 261980000.0 399070.0 472860.0 311090.0 337780.0 444110.0 408510.0 335600.0 329540.0 390240.0 362670.0 False True 376932.7915736781 450143.0958226702 331143.359161599 369882.50964273966 479058.9303597575 405960.3375609094 369525.7231403685 328396.9026552143 319382.2531498497 359457.02595299017 1.0486171207096489 1.2522862632306426 0.9212321230435652 1.0290034216527262 1.3327293550311878 1.12937099082882 1.0280108509791517 0.9135915532171629 0.8885130351899662 1.0 18.45545977736731 -7.015419942958667 3.184569609217103 0.9274815054033257 1.120852616066647 0.358065474294734 0.1109203688819714 0.2878132491605945 5.974037287455029 0.05795163523672292 0.03342743810233487 9.651172033287394e-08 7.015419942958667 0.19337111066332124 EILSPLR ddPTM_KYSE-520_SHP099_60min_R1 2 EILSPLR 7 0 A0A140T9S5;Q9Y334-2;Q9Y334 A0A140T9S5 VWA7 von Willebrand factor A domain-containing protein 7 0 ; 90.986 0.054857 676990000.0 514110.0 593980.0 464230.0 370390.0 517180.0 599640.0 502290.0 512500.0 707560.0 599430.0 False True 485591.2934471232 565444.3092178438 494155.0085942619 405591.7542381862 557879.1236483278 595897.4243348361 553066.3750779962 510722.2571183988 579084.9401360903 594119.5165494839 0.8173293081959858 0.9517349514148611 0.8317434368495518 0.6826770421442714 0.9390015108212025 1.0029925086381237 0.9309008704007649 0.8596288169164378 0.9746943569524342 1.0 19.180393655612647 -5.953295399072193 24.999994849132733 0.9465100917531319 0.8284755344335053 0.4413057524964168 0.07157009991021349 134.5959753731647 72045.76737688475 0.02327577496445784 0.02639223869395233 1.11353686876831e-06 5.953295399072193 -0.11803455731962664 EILWRPK ddPTM_KYSE-520_SHP099_60min_R1 1 EILWRPK 7 1 P08243-3;P08243-2;P08243 P08243-3 ASNS Asparagine synthetase [glutamine-hydrolyzing] 0 72.138 0.027966 565980000.0 404730.0 389670.0 291590.0 250220.0 596450.0 578160.0 405030.0 443700.0 442980.0 470600.0 False True 382278.8200907474 370949.66829340573 310386.3579604955 274000.83356861386 643387.2216637259 574551.4889824375 445974.3851118693 442160.90826035815 362545.99861705763 466430.85012125963 0.819583052860601 0.7952940252493348 0.6654498901172667 0.5874414899815931 1.379383935467524 1.2318042188527396 0.9561425557420308 0.9479666881927044 0.77727705730186 1.0 18.831303687171285 -5.737652546285531 24.999999489797997 1.050682017774498 0.7188606388478084 0.4911201041554266 0.16545950907869547 223.24547104045453 234630.25680208337 0.053614492344347654 0.06917748309473237 1.829563357836024e-06 5.737652546285531 -0.3318213789266896 EIMLTPVTVAYS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 EIMLTPVTVAYSPK 14 0 F5H1U6;A0A0A0MTP3;Q99550-2;Q99550;H0YG46;J3KNE4 F5H1U6 MPHOSPH9 M-phase phosphoprotein 9 1 EIMLTPVTVAYS(1)PK 200.69 1.6092999999999998e-09 0.0 301900.0 289150.0 220410.0 236670.0 235610.0 290750.0 210200.0 279350.0 284830.0 285370.0 True False 285153.00517727033 275258.7999770018 234617.98126846924 259163.04564257004 254151.16656247876 288935.32140176353 231449.0673543074 278381.0000507801 233112.05197999088 282841.8438145003 1.0081712144554034 0.9731898090634998 0.8295023752650321 0.9162825491002674 0.898562826259759 1.0215437627795256 0.8182985382675609 0.9842284871871863 0.8241780948538705 1.0 18.109636043657744 -4.538206444981585 24.613537662462086 0.910646594562618 0.9994259109541552 0.17841400965940746 0.06967073915667149 253.17787129856697 406557.87952942104 0.016411566220029594 0.04345336158570722 2.8959666420446206e-05 4.538206444981585 0.08877931639153724 EIMS(ph)PTPVELHK ddPTM_KYSE-520_SHP099_60min_R1 3 EIMSPTPVELHK 12 0 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;H0YFK8 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 EIMS(0.988)PT(0.012)PVELHK;EIMS(0.981)PT(0.019)PVELHK;EIMS(0.971)PT(0.029)PVELHK 155.98 5.7098e-06 393706000.0 365734.0 379341.0 347990.0 359266.0 423420.0 626580.0 673380.0 903720.0 973620.0 838720.0 True False 345446.005947346 361116.8889575504 370421.9922036866 393410.53262273886 456740.7450697542 622669.281801951 741451.8219554868 900585.2062498339 796835.1509628867 831289.5933142864 0.41555434920107664 0.4344056413816101 0.4455992173880623 0.4732532871658382 0.5494363802255297 0.7490401501592452 0.8919296330889654 1.083359172895779 0.9585530209586378 1.0 19.664991625388044 -6.475509245282865 1.242046517878931 1.0241173319231511 0.43262056955260797 0.9801815120807098 0.03542770030430739 0.053569592601100724 0.1687024717591012 0.01885769460377687 0.014059999288159698 3.3457289537279495e-07 6.475509245282865 -0.5914967623705432 down EIPFNEDPNPNTHS(ph)SGPSTPLK ddPTM_KYSE-520_SHP099_60min_R1 1 EIPFNEDPNPNTHSSGPSTPLK 22 0 Q86YS7;Q86YS7-3;H0YFE9 Q86YS7 C2CD5 C2 domain-containing protein 5 1 EIPFNEDPNPNT(0.051)HS(0.344)S(0.202)GPS(0.202)T(0.202)PLK 69.248 0.011413 573580000.0 1040000.0 1203100.0 921170.0 1165100.0 865430.0 812010.0 637100.0 737480.0 870630.0 771550.0 True False 982309.1268113989 1145301.2701100828 980550.0921241132 1275830.7536999104 933534.4173768759 806941.9443901847 701504.2854968075 734921.8540091257 712545.5387962629 764714.667256817 1.2845433321360715 1.497684455587213 1.2822430824317006 1.6683748963212226 1.2207617525182939 1.0552196511214376 0.917341219586179 0.9610406148549968 0.9317796157255686 1.0 19.544562019729987 -6.1650473077108074 2.6700042179380246 0.9581675680153363 1.4277189117458728 0.7922950883430148 0.11060267348923807 0.11714141313054795 1.6294064834812365 0.03801214035567273 0.03749214593489629 6.838371528228019e-07 6.1650473077108074 0.46955134373053653 EIPFNEDPNPNTHSS(ph)GPS(ph)TPLKNQTYSFS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 EIPFNEDPNPNTHSSGPSTPLKNQTYSFSPSK 32 1 Q86YS7;Q86YS7-3;H0YFE9 Q86YS7 C2CD5 C2 domain-containing protein 5 3 EIPFNEDPNPNT(0.076)HS(0.43)S(0.45)GPS(0.453)T(0.481)PLKNQT(0.071)Y(0.046)S(0.072)FS(0.793)PS(0.129)K 59.443000000000005 0.055723 371550000.0 96679.0 119800.0 86346.0 132880.0 94455.0 79769.0 88507.0 88665.0 135470.0 95005.0 True False 91316.02314519159 114044.62817653384 91912.00131848475 145508.8752481712 101888.0711245656 79271.1320821919 97454.1513050793 88357.44180956663 110872.06292079267 94163.32961277143 0.9697620455936633 1.2111363164994315 0.9760912416378559 1.5452817550796947 1.0820355603774918 0.8418471650076434 1.0349480175121328 0.9383423692951344 1.1774441640576294 1.0 16.522877714485116 -5.997877642314503 24.99981671605846 0.9930509910262333 1.1825849047977735 0.1973715918003789 0.16791590536612358 106.45011235354288 1253873.7207795987 0.05132666351173471 0.05783053361531009 1.0048988695844567e-06 5.997877642314503 0.18953391377154016 EIPS(ph)AT(ph)QSPISK ddPTM_KYSE-520_SHP099_60min_R1 1 EIPSATQSPISK 12 0 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 2 EIPS(0.998)AT(0.626)QS(0.375)PIS(0.001)K 85.845 0.0077344 1220200000.0 3484300.0 3030500.0 2771700.0 2566600.0 2863000.0 2478700.0 2607500.0 2629300.0 3225600.0 2856800.0 True False 3291018.9332201546 2884910.2311267643 2950368.2168767997 2810528.892323573 3088301.811758313 2463229.5138729173 2871091.546747648 2620179.571983235 2639912.350758905 2831490.9745567674 1.162291867709492 1.018866122848355 1.041983973598447 0.9925968041496316 1.090698094929208 0.8699407965651395 1.013985766702675 0.9253709778797333 0.9323400196153366 1.0 21.433130500533053 -1.0000000000995406 0.39438304119551676 0.9528164469211794 3.923339536135043 0.5017594838177737 0.05636534619006473 58.01632007445116 0.7777384367848871 0.03977592222672868 133.2773631358893 0.09999999997707994 1.0000000000995406 2.9705230892138634 EIPS(ph)ATQS(ph)PISK ddPTM_KYSE-520_SHP099_60min_R1 6 EIPSATQSPISK 12 0 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 2 EIPS(1)AT(0.008)QS(0.992)PISK;EIPS(0.985)AT(0.062)QS(0.933)PIS(0.02)K;EIPS(0.999)AT(0.003)QS(0.998)PISK;EIPS(0.999)AT(0.008)QS(0.992)PISK;EIPS(0.998)AT(0.079)QS(0.923)PISK;EIPS(0.971)AT(0.234)QS(0.794)PISK 199.33 4.2557e-08 3954380000.0 8835040.0 7852710.0 7246700.0 6494090.0 7093630.0 6409690.0 6418630.0 6686390.0 8278510.0 6513530.0 True False 8344942.718984406 7475454.024441987 7713833.877129966 7111286.3610806465 7651858.323766369 6369684.74715621 7067487.760192082 6663196.473705159 6775341.268254315 6455825.191649656 1.2926221623500969 1.1579393497381527 1.1948641185494757 1.101530191721858 1.1852641756260274 0.9866569428483186 1.094745838120522 1.0321215763902234 1.0494926778714424 1.0 22.62217008372758 -1.0000006864849054 0.22770549051150168 0.9957330344201388 2.555000478484039 0.7460326575744933 0.0466958262355431 24.051313749249985 0.31301634831686015 0.0654265427142036 13.937953009736999 0.09999984193113397 1.0000006864849054 1.5592674440639005 EIPS(ph)LSPTIPR ddPTM_KYSE-520_SHP099_60min_R1 1 EIPSLSPTIPR 11 0 Q9ULD5 Q9ULD5 ZNF777 Zinc finger protein 777 1 EIPS(0.766)LS(0.15)PT(0.084)IPR 142.08 8.8204e-05 152770000.0 104980.0 115140.0 103780.0 85980.0 92693.0 124370.0 93266.0 102550.0 137450.0 127390.0 True False 99156.55012755824 109608.50157133666 110469.82485387112 94151.51334917039 99987.41174897415 123593.76069729085 102694.23746844349 102194.27798534998 112492.54483253096 126261.42370792017 0.785327356651201 0.8681076005042789 0.8749293458738461 0.745687087823202 0.7919078433669056 0.9788719077269364 0.813346107248129 0.8093863904287617 0.890949440683952 1.0 16.946054398389744 EIPSAT(ph)QSPISK ddPTM_KYSE-520_SHP099_60min_R1 1 EIPSATQSPISK 12 0 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 EIPS(0.028)AT(0.478)QS(0.478)PIS(0.015)K 114.97 0.0066159999999999995 3605200000.0 3939600.0 4254900.0 3177700.0 2623300.0 2926300.0 3907600.0 3190100.0 3697200.0 4195000.0 3850200.0 True False 3721062.5346021065 4050488.2172648893 3382539.6264997646 2872617.643276092 3156583.161630579 3883211.2189493747 3512586.4403757146 3684375.2761329627 3433293.747344252 3816090.2234102758 0.9750981545915214 1.0614235985346128 0.8863887980816487 0.7527646033245402 0.8271772879650828 1.0175889435546719 0.9204673460882346 0.965484320452045 0.8996888297562485 1.0 21.863663850554346 -8.713352606944635 14.503096820548311 0.9999999975233409 0.9220453101482591 0.06848292673143597 0.08525610444560207 0.0 0.0 0.09076389307501086 0.02201347753767866 1.9348504065077123e-09 8.713352606944635 -0.07795468737508182 EIPSATQS(ph)PISK ddPTM_KYSE-520_SHP099_60min_R1 9 EIPSATQSPISK 12 0 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 EIPS(0.012)AT(0.311)QS(0.676)PISK;EIPS(0.001)AT(0.018)QS(0.981)PISK;EIPSATQS(1)PISK;EIPSAT(0.032)QS(0.967)PISK;EIPSAT(0.112)QS(0.888)PISK;EIPSATQS(1)PISK;EIPSAT(0.005)QS(0.995)PISK;EIPS(0.049)AT(0.225)QS(0.725)PIS(0.001)K;EIPS(0.006)AT(0.029)QS(0.965)PISK 252.52 6.6415e-16 119601000000.0 44400000.0 50363500.0 37449800.0 29004500.0 33326500.0 44207800.0 35434800.0 43484400.0 49685000.0 46014200.0 True False 41937043.49079439 47943961.862845324 39863874.0297986 31761078.95947907 35949105.9481535 43931882.72214927 39016895.39432159 43333562.7657353 40663456.456924655 45606549.98650587 0.9195399236119105 1.051251670583086 0.8740822105946092 0.6964148563940176 0.7882443631186786 0.9632801151402133 0.8555107853118896 0.9501609479023713 0.8916143946199879 1.0 25.442737702514755 -10.024789986606146 11.147358726771143 0.9999973100884699 0.886742433846917 0.1174188337361669 0.09225225129906373 0.0 0.0 0.09776666489873488 0.023711899178932384 9.445175097054105e-11 10.024789986606146 -0.11325487624155295 EIPSLS(ph)PTIPR ddPTM_KYSE-520_SHP099_60min_R1 3 EIPSLSPTIPR 11 0 Q9ULD5 Q9ULD5 ZNF777 Zinc finger protein 777 1 EIPS(0.004)LS(0.991)PT(0.005)IPR;EIPS(0.064)LS(0.935)PT(0.001)IPR;EIPS(0.241)LS(0.754)PT(0.005)IPR 210.44 1.3883e-09 470220000.0 624380.0 653400.0 507640.0 413010.0 506600.0 630960.0 511960.0 597420.0 813250.0 635820.0 True False 589744.3967293276 622009.6832266044 540363.2866527179 452262.34622401505 546466.5378402935 627021.9445972715 563713.9130481029 595347.6894588761 665584.3003641746 630187.1294604741 0.9358242483216517 0.9870237809507935 0.8574648090882819 0.7176635717889274 0.8671496326942493 0.994977388913175 0.894518289401941 0.9447157227228279 1.0561693015438214 1.0 19.265420764410862 -7.279574403218745 1.0986475499725517 1.023907817859854 0.8810247489815232 0.3230999076668267 0.07536140404527739 0.6961897493220834 1.4834057358330532 0.07349707476462984 0.028654003573870816 5.2532200936912236e-08 7.279574403218745 -0.1428830688783308 EIQEELDKLS(ph)PHK ddPTM_KYSE-520_SHP099_60min_R1 4 EIQEELDKLSPHK 13 1 Q2KHM9 Q2KHM9 KIAA0753 Uncharacterized protein KIAA0753 1 EIQEELDKLS(1)PHK;EIQEELDKLS(1)PHK;EIQEELDKLS(1)PHK;EIQEELDKLS(1)PHK 208.13 2.6695999999999997e-11 2119380000.0 900026.0 811820.0 757334.0 763856.0 807480.0 775872.0 726617.0 796012.0 890940.0 855979.0 True False 850099.7636226506 772818.9486333377 806152.9614172437 836452.6445783188 871024.0820672731 771029.4950528941 800070.537458537 793250.8201625968 729167.7547696977 848395.692001585 1.0020085811810822 0.9109180491122696 0.9502086927331281 0.9859227863414894 1.026671976624848 0.9088088286184434 0.9430393683058003 0.935000999699931 0.859466592822274 1.0 19.694377769581884 -6.306853080217653 24.99988889292493 0.9260617291396877 0.9707912017324258 0.2130386264272669 0.04347664246909626 734.784680075858 404491.04512919503 0.015317322217215507 0.013508646319074365 4.933406705587435e-07 6.306853080217653 0.044729472592738184 EIQGHQPR ddPTM_KYSE-520_SHP099_60min_R1 1 EIQGHQPR 8 0 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 88.294 0.007989 416780000.0 350100.0 360140.0 279840.0 283940.0 328750.0 308320.0 261160.0 296080.0 369120.0 281040.0 False True 330679.2550929526 342838.3338188395 297878.9341598314 310925.57223032595 354620.75466837094 306395.66051450296 287560.60147597967 295052.9675855913 302097.1127579758 278550.20424581174 1.187144184612188 1.2307954853132885 1.0693904711588818 1.1162281250956971 1.2730945777926241 1.0999656645166862 1.032347480248898 1.0592452027973256 1.0845338045108188 1.0 18.087577848282 -6.513371743394486 17.35967097581302 1.0514227222922066 1.170971880111998 0.546465679462445 0.056347857304928736 7.129783965915919 13021.730470582499 0.021375601122884495 0.017609524153866053 3.0663961191829596e-07 6.513371743394486 0.11954915781979136 EIQHHLK ddPTM_KYSE-520_SHP099_60min_R1 1 EIQHHLK 7 0 Q99961-3;Q99961-2;Q99961;M0R0I3;Q99962;M0QYE0 Q99961-3 SH3GL1;SH3GL2 Endophilin-A2;Endophilin-A1 0 73.931 0.022018 0.0 718250.0 562580.0 512480.0 473390.0 668520.0 592470.0 499810.0 585710.0 634350.0 444800.0 False True 678407.2407041219 535552.8123502039 545515.2807969915 518380.84327010607 721128.7206415185 588772.1749644119 550335.6724755295 583678.3087157416 519168.0306621744 440859.4180491635 1.5388289620898328 1.2147927217253651 1.2373905568603667 1.1758415994921483 1.635733957624333 1.3355100307707468 1.2483246358006976 1.3239556303425764 1.177627174121702 1.0 18.749959154670496 -8.079284303833528 1.249951380071451 0.9991570394497518 1.340207505332703 0.38174296790322626 0.13722519862187796 0.628260848876705 2.148831854356188 0.1334377175440204 0.04113224343572855 8.331356073597653e-09 8.079284303833528 0.3410504658829512 EIQNGNLHES(ph)DSESVPR ddPTM_KYSE-520_SHP099_60min_R1 7 EIQNGNLHESDSESVPR 17 0 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 EIQNGNLHES(0.993)DS(0.007)ESVPR;EIQNGNLHES(0.759)DS(0.231)ES(0.01)VPR;EIQNGNLHES(0.994)DS(0.006)ESVPR;EIQNGNLHES(0.967)DS(0.032)ES(0.001)VPR;EIQNGNLHES(1)DSESVPR;EIQNGNLHES(0.977)DS(0.023)ES(0.001)VPR;EIQNGNLHES(0.809)DS(0.191)ESVPR 237.15 2.2031999999999996e-23 4610280000.0 2068878.0 2279840.0 1970959.0 2481562.0 2213699.0 2124287.0 2081082.0 2372067.0 2895330.0 2001004.0 True False 1954113.2131339575 2170313.0642903913 2098010.170785901 2717408.906371178 2387904.5170756434 2111028.5368687473 2291458.0779630626 2363838.853221598 2369611.0573297325 1983276.661317554 0.9852953202382655 1.0943067634591046 1.057850481330288 1.3701612888269035 1.2040198746095676 1.0644145509514158 1.1553900283588139 1.191885579720998 1.1947960178967285 1.0 20.919454512685316 -5.044815795053357 24.999794480393906 1.1763740078460014 1.0488699484051904 0.2601787903848237 0.09438594126046226 560.9039179506348 312890.8741666918 0.025596763996690364 0.04433746222497812 9.019536179162333e-06 5.044815795053357 -0.127504059440811 EIQSTLEGDRGS(ph)GNWR ddPTM_KYSE-520_SHP099_60min_R1 2 EIQSTLEGDRGSGNWR 16 1 J3QRV5;Q6P1M3 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 EIQSTLEGDRGS(1)GNWR;EIQSTLEGDRGS(1)GNWR 182.22 1.8379e-09 480510000.0 179708.0 188765.0 160934.0 137324.0 162762.0 164588.0 143786.0 133566.0 179615.0 152428.0 True False 169739.23900098354 179696.4460579586 171308.06314350435 150375.2316720339 175570.44341089972 163560.74524118143 158321.2920961296 133102.6907205387 147001.44372568213 151077.6065071894 1.1235234852155676 1.1894313804171057 1.133907712095983 0.9953509004319441 1.1621208958095637 1.0826273265945472 1.0479467854727729 0.8810219714078187 0.9730194111771734 1.0 17.20493030717476 -6.9735085849051375 2.8421488972748206 0.9457035152263102 1.1161527130610445 0.6202252249698621 0.056716585003624816 0.17415346496538683 2.8495216032663993 0.029097506788951615 0.01701426909865848 1.0628975722672662e-07 6.9735085849051375 0.17044919783473422 EIQTAVR ddPTM_KYSE-520_SHP099_60min_R1 2 EIQTAVR 7 0 P62807;O60814;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;P57053;Q5QNW6-2;Q16778;P06899;P33778;P23527;Q99880;Q96A08 P62807;Q16778;Q99880 HIST1H2BC;HIST1H2BK;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;H2BFS;HIST2H2BE;HIST1H2BJ;HIST1H2BB;HIST1H2BO;HIST1H2BL;HIST1H2BA Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-J;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-L;Histone H2B type 1-A 0 ; 133.9 0.01414 2549500000.0 1476680.0 1733720.0 1371710.0 944910.0 1548870.0 1974040.0 1266930.0 1560650.0 1742910.0 1633860.0 False True 1394765.6167114018 1650429.4888332272 1460132.6214136009 1034713.9623024487 1670757.2571352075 1961719.284127042 1395003.6484452544 1555236.4694084479 1426441.4791856413 1619385.2715238447 0.8612932581503132 1.0191703715325073 0.9016585781588672 0.6389547814824701 1.0317231399560784 1.2113975090566684 0.8614402470960807 0.960386942351876 0.8808536821156568 1.0 20.62701483056213 EIQVQHPAAK ddPTM_KYSE-520_SHP099_60min_R1 1 EIQVQHPAAK 10 0 B4DUR8;P49368;Q5SZX6;Q5SZX9;E9PRC8 B4DUR8 CCT3 T-complex protein 1 subunit gamma 0 56.225 0.043349 0.0 196530.0 197760.0 173240.0 140580.0 195680.0 208400.0 148930.0 202670.0 180110.0 190660.0 False True 185628.08912715802 188259.31275618816 184407.32759380058 153940.68093308192 211078.90273310046 207099.29829794532 163985.29781673144 201966.98507353367 147406.56420361693 188970.90073123525 0.9823104425541604 0.9962344044914134 0.9758503922044314 0.8146263807676124 1.116991568100257 1.095932217587793 0.8677806857149943 1.068772939600802 0.7800490108964798 1.0 17.527804568127127 -7.7509158350408445 24.99896479587871 0.8900244526333737 0.9874304121751759 0.13275863015081302 0.10187233004812338 381.8071982358958 907007.9425098494 0.06894586952042762 0.02544832427645228 1.774533346773058e-08 7.7509158350408445 0.0974059595418022 EIRPVCR ddPTM_KYSE-520_SHP099_60min_R1 4 EIRPVCR 7 1 Q13838-2;Q13838;Q5STU3;A0A0G2JJZ9;F6WLT2;A0A140T9X9;F6UJC5;A0A140T996;A0A140TA18;A0A140T9X3;H0YCC6 Q13838-2 DDX39B Spliceosome RNA helicase DDX39B 0 ;;; 166.78 0.00083106 4852360000.0 1619680.0 1444000.0 1054030.0 911560.0 1425640.0 1295460.0 999840.0 1117730.0 1109520.0 1020830.0 False True 1529833.1216479698 1374628.0725118124 1121974.460307627 998194.3883294928 1537829.7572179956 1287374.553613513 1100913.584698051 1113852.8555101422 908059.1367230965 1011786.2403937217 1.512012182585778 1.358615108243512 1.1089046436043912 0.9865664786477627 1.5199156658026618 1.2723780006264467 1.0880891049374686 1.1008776469194745 0.8974812074630889 1.0 19.948473094041848 -1.0000000000092026 0.15754329269503203 0.9234352723406141 2.8347470913157067 0.4109905240046373 0.16014326035864693 76.0934906324963 0.778004363290399 0.5460845261417481 33.630945453284106 0.09999999999788102 1.0000000000092026 1.9113118189750926 EIS(ph)DDEAEEEK ddPTM_KYSE-520_SHP099_60min_R1 3 EISDDEAEEEK 11 0 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 1 EIS(1)DDEAEEEK;EIS(1)DDEAEEEK;EIS(1)DDEAEEEK 272.92 3.7437e-33 3889000000.0 8015590.0 6261030.0 5316910.0 6756530.0 6780030.0 6565240.0 8130430.0 7581010.0 6687680.0 6639800.0 True False 7570949.24401749 5960240.72080238 5659646.525956794 7398668.579775175 7313579.787906295 6524263.901907866 8952333.209750144 7554713.245731036 5473365.894693487 6580976.537686239 1.1504294538450535 0.9056772481516703 0.8600010186249092 1.1242508672392901 1.1113213587717221 0.991382337339511 1.3603350746631948 1.1479623430456944 0.8316950931750063 1.0 22.649870247744282 -5.285888898357276 24.168563195802474 1.096326773862937 0.9654000099008693 0.09820315856191919 0.14580980208948302 989.3383764775148 977967.0896889016 0.041741142511821094 0.061952344384209726 5.177392635795285e-06 5.285888898357276 -0.1309267639620677 EIS(ph)DDEAEEEKGEK ddPTM_KYSE-520_SHP099_60min_R1 14 EISDDEAEEEKGEK 14 1 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 1 EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK;EIS(1)DDEAEEEKGEK 264.03 2.8004e-26 55916000000.0 30635850.0 23336070.0 20320680.0 25047940.0 24045090.0 24291790.0 31538340.0 28103040.0 24374270.0 23394990.0 True False 28936418.329447143 22214970.169044815 21630583.547037583 27428488.68666223 25937301.785152506 24140175.92802802 34726543.19173663 28005557.113538817 19948516.993344583 23187728.589626793 1.2479194854123 0.9580485679387696 0.9328461588391279 1.1828881203539952 1.1185788071003968 1.0410754910607032 1.4976259126679539 1.2077749230714783 0.8603049201752647 1.0 24.466858168413783 EIS(ph)PGSGPGEIR ddPTM_KYSE-520_SHP099_60min_R1 4 EISPGSGPGEIR 12 0 O43491;E9PHY5;O43491-4;E9PK52;H0Y5B0;E9PMV8;Q6R5J7;E9PMG5 O43491 EPB41L2 Band 4.1-like protein 2 1 EIS(0.976)PGS(0.024)GPGEIR;EIS(0.987)PGS(0.013)GPGEIR;EIS(0.911)PGS(0.089)GPGEIR;EIS(0.998)PGS(0.002)GPGEIR 234.87 3.3859e-15 2235710000.0 1674640.0 1849950.0 1510640.0 1308510.0 1402600.0 1738880.0 1407430.0 1656880.0 1976530.0 1647180.0 True False 1581744.3808879228 1761075.62516844 1608018.2715094585 1432870.3969821231 1512976.640297662 1728027.0049152153 1549706.7595931157 1651132.6699987003 1617641.976266585 1632587.2666866465 0.9688574774309554 1.0787022912058857 0.9849508839873221 0.8776684874494637 0.9267355388409125 1.0584591955211464 0.9492336435639745 1.0113595173075751 0.9908456407047734 1.0 20.638728679534566 -7.3130481308300626 24.983731472509273 1.0008269314568328 0.9792437087461605 0.034509126084943054 0.055221403538553905 1804.5310127592847 873562.1140219424 0.032462096110736194 0.015594326043269704 4.863533024384715e-08 7.3130481308300626 -0.021583222710672256 EIS(ph)S(ph)SPTSK ddPTM_KYSE-520_SHP099_60min_R1 2 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 EIS(0.947)S(0.661)S(0.387)PT(0.004)S(0.001)K;EIS(0.981)S(0.673)S(0.301)PT(0.034)S(0.011)K 70.488 0.024012000000000002 3018800000.0 9800000.0 8319600.0 7706800.0 8807500.0 8661500.0 8995600.0 9026300.0 8112700.0 10050000.0 8464400.0 True False 9256374.464184336 7919913.9280258035 8203592.659315987 9644562.151928572 9343110.772806376 8939455.123651603 9938766.49219877 8084558.937218409 8225173.339883121 8389412.001203544 1.103340074710411 0.944036832007966 0.9778507311524455 1.1496112183481946 1.113678857524939 1.0655639659095477 1.1846797476119848 0.9636621656033342 0.9804231022034844 1.0 23.0001382676323 EIS(ph)SS(ph)PTSK ddPTM_KYSE-520_SHP099_60min_R1 4 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 EIS(0.986)S(0.015)S(0.999)PTSK;EIS(0.944)S(0.062)S(0.986)PT(0.007)S(0.001)K;EIS(0.984)S(0.185)S(0.82)PT(0.006)S(0.005)K;EIS(0.946)S(0.22)S(0.816)PT(0.008)S(0.009)K 152.67 0.00025163 2671650000.0 7269900.0 5988290.0 5735920.0 6184280.0 6135400.0 6031250.0 6334190.0 5750830.0 7236200.0 5853720.0 True False 6866624.154813649 5700603.559793464 6105666.580996491 6772032.1118284175 6618221.074349263 5993606.731571404 6974511.740937101 5730881.712983815 5922288.489757441 5801860.594925246 1.183521051991447 0.9825474891243768 1.0523635446079103 1.1672173091769489 1.1407066691912708 1.0330490768450855 1.2021163947023383 0.9877661862466129 1.0207567715324857 1.0 22.468084200705274 -7.305230394921759 24.988103059614705 1.00319604861945 1.1023250024660893 0.34379460126150696 0.06665877590849123 585.2985366000773 333981.0382548388 0.036253957104413134 0.017416021360887265 4.951874222462334e-08 7.305230394921759 0.09912895384663933 EISLWFKPEELVDYK ddPTM_KYSE-520_SHP099_60min_R1 3 EISLWFKPEELVDYK 15 1 Q32Q12;P22392-2;P22392 Q32Q12 NME1-NME2;NME2 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B 0 ;; 170.49 3.4042e-08 3244567000.0 3212300.0 2610500.0 2013530.0 1676278.0 3249540.0 2607760.0 1958880.0 1829100.0 1919680.0 1761775.0 False True 3034107.3154387074 2485087.661559615 2143325.365561908 1835590.9571286438 3505260.3106465633 2591484.0025405427 2156902.707226475 1822755.2790151474 1571114.5031947086 1746167.0441402083 1.7375813646355154 1.4231671992087345 1.2274457777418746 1.051211545475288 2.0074026264609244 1.4840985639014612 1.2352212890883574 1.043860772159201 0.8997504038729047 1.0 20.735760147893583 -7.078037030153534 2.4151798440381196 0.9676655154684827 1.47520428567987 0.46116080915168634 0.2464197974209622 0.30716578946145495 3.490064119264591 0.14997739211766634 0.07709402152169224 8.35531773510839e-08 7.078037030153534 0.5075387702113873 EISS(ph)PARPCSFEEAMK ddPTM_KYSE-520_SHP099_60min_R1 4 EISSPARPCSFEEAMK 16 1 O94916-2;O94916;O94916-4;O94916-5 O94916-2 NFAT5 Nuclear factor of activated T-cells 5 1 EIS(0.034)S(0.966)PARPCSFEEAMK;EIS(0.342)S(0.658)PARPCSFEEAMK;EIS(0.095)S(0.905)PARPCSFEEAMK;EIS(0.176)S(0.824)PARPCSFEEAMK 168.1 6.9078e-08 3128990000.0 3096680.0 2950200.0 2494540.0 2328580.0 2445710.0 2648740.0 2379840.0 2738420.0 3451280.0 2953000.0 True False 2924900.9873214653 2808467.9636595226 2655342.0398051213 2549887.543086897 2638173.4628136307 2632208.2311597853 2620417.4522001604 2728921.0601720302 2824614.5516887372 2926838.7173992367 0.9993379443608381 0.9595567897076005 0.9072389346293174 0.8712087645720038 0.901373023094996 0.8993349088598713 0.8953064057211326 0.9323783520934579 0.9650735228071142 1.0 21.480911817968305 -7.8899097009873875 2.2450279380693736 0.998859423537149 0.9167841389937774 0.3624569347676545 0.034491582562760414 0.3270228995022077 3.470708131291152 0.03623351979136867 0.010114903471110846 1.2885174338829698e-08 7.8899097009873875 -0.08207528454337154 EISS(ph)S(ph)PTSK ddPTM_KYSE-520_SHP099_60min_R1 2 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 EIS(0.013)S(0.987)S(0.999)PT(0.001)SK;EIS(0.032)S(0.968)S(0.993)PT(0.004)S(0.003)K 126.66 0.00097156 1532380000.0 4449600.0 4035900.0 3648500.0 3925800.0 3792700.0 3795100.0 3854600.0 3656700.0 4624400.0 3485600.0 True False 4202771.817942305 3842009.3059905954 3883688.1478063976 4298906.851665186 4091163.9124889127 3771413.373179137 4244260.585270754 3644015.7611801988 3784725.5316373655 3454720.2957557663 1.2165302710918575 1.112104302831875 1.124168620127549 1.2443574250993719 1.1842243545780067 1.0916696723067387 1.2285395696100097 1.0547932825870123 1.0955229968362479 1.0 21.720137479862156 -7.751724692119395 1.101802044989824 1.005676460382321 1.1691001962815584 0.5005390418116495 0.054060647321931596 0.38986111456533923 0.9787131070737467 0.04994987836083773 0.01673615890230035 1.771231421211109e-08 7.751724692119395 0.16342373589923742 EISS(ph)SPTSK ddPTM_KYSE-520_SHP099_60min_R1 2 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EIS(0.003)S(0.491)S(0.491)PT(0.014)SK;EIS(0.049)S(0.475)S(0.475)PT(0.001)SK 112.85 0.0019762 1532560000.0 8634900.0 8097800.0 7107000.0 6481500.0 6826700.0 7992400.0 6963500.0 7342400.0 9290300.0 7848500.0 True False 8155904.8837536005 7708769.532954396 7565128.591602061 7097499.811265972 7363922.451390311 7942516.466969749 7667438.53721084 7316930.92812905 7603415.709404598 7778968.396040604 1.0484558451098545 0.9909758133068212 0.9725105189336692 0.9123960209015002 0.9466451175117839 1.0210243907164334 0.9856626414774314 0.940604274964438 0.9774323949271525 1.0 22.89114741494741 -4.31449515647281 2.323873176188839 0.9671509420911455 1.0626340938396055 0.39656183772199327 0.02929052924325582 0.5394414855664007 3.8022549439552193 0.008237856657637113 0.09966542010758586 4.8473551867180726e-05 4.31449515647281 0.09548315174846 EISSS(ph)PTSK ddPTM_KYSE-520_SHP099_60min_R1 6 EISSSPTSK 9 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EISS(0.006)S(0.656)PT(0.321)S(0.016)K;EISS(0.006)S(0.717)PT(0.07)S(0.207)K;EISS(0.002)S(0.997)PT(0.001)SK;EISS(0.003)S(0.994)PT(0.002)SK;EISS(0.005)S(0.995)PTSK;EISS(0.098)S(0.899)PT(0.002)SK 200.06 2.1668e-06 10131900000.0 13076800.0 11896700.0 10362900.0 9211200.0 9728880.0 11511610.0 10536580.0 10771770.0 13002400.0 10959000.0 True False 12351403.836045489 11325164.674689248 11030909.115226239 10086629.678551743 10494487.506244935 11439761.771975078 11601720.33351115 10734405.244020026 10641491.923830483 10861911.78597299 1.1371298238672882 1.042649295800257 1.0155587094227272 0.9286237890071578 0.9661731482479406 1.0531996574257139 1.0681103439353599 0.9882611326196162 0.9797070841224143 1.0 23.372774715917526 -4.311116203301402 2.0879385709444738 1.000145603135187 1.1660964898295183 0.5476644187513451 0.037988788801145264 0.5290045050971162 2.790313776766621 0.011437403618364421 0.15936241540604565 4.88521629103842e-05 4.311116203301402 0.16595088669433133 EITALAPS(ph)TMK ddPTM_KYSE-520_SHP099_60min_R1 4 EITALAPSTMK 11 0 P60709;P63267-2;A0A2R8YFE2;P63261;P68133;P68032;P63267;P62736;A6NL76 P60709;P63261;P68133 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 1 EITALAPS(0.992)T(0.008)MK;EITALAPS(0.983)T(0.017)MK;EITALAPS(0.993)T(0.007)MK;EITALAPS(1)TMK 288.61 2.382e-28 4068770000.0 7469400.0 9541800.0 7440700.0 6606100.0 6980920.0 8597200.0 7038780.0 9801700.0 10277900.0 10825700.0 True False 7055057.492120247 9083397.605466204 7920339.427540943 7233941.757803603 7530278.6879985435 8543541.685830573 7750328.57427284 9767700.19043398 8411692.444774602 10729792.720267154 0.6575203898202228 0.8465585349387851 0.7381633209540454 0.6741921252718748 0.701810266453223 0.7962448025387253 0.7223185737440667 0.9103344719776452 0.7839566582573427 1.0 23.35511887037763 -8.091190339387166 0.5894623280188368 1.000364649906111 0.7275299761733645 0.5963517541101346 0.06583829807276213 0.6712100747640681 0.5396545533440537 0.06990229358675652 0.029731838402450923 8.10605713688228e-09 8.091190339387166 -0.2728346737327465 EITALAPSTMK ddPTM_KYSE-520_SHP099_60min_R1 2 EITALAPSTMK 11 0 P60709;P63267-2;A0A2R8YFE2;P63261;P68133;P68032;P63267;P62736;A6NL76 P60709;P63261;P68133 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle 0 ; 168.74 0.00010558 2083730000.0 3801000.0 5183500.0 4448600.0 3137900.0 5192200.0 5225600.0 4075800.0 4520500.0 4659900.0 5149100.0 False True 3590150.9528943533 4934476.879407873 4735363.874011663 3436125.0725559657 5600796.600423155 5192985.0920621045 4487821.639974715 4504819.440592631 3813779.626519538 5103482.979939184 0.7034707408659048 0.9668841649525155 0.9278690440676441 0.6732901992742439 1.0974459251532367 1.0175374567672189 0.8793644766947365 0.8826951041671374 0.7472895748865581 1.0 22.28305075029624 -4.250543714632404 23.628875716559985 0.9079790627053809 0.7034704834265353 0.21233854162229737 0.11941191944725026 1220.3105004493552 2646314.514490925 0.030044009367268084 0.40872679047229643 5.6163774293050375e-05 4.250543714632404 -0.20450857927884558 EITSHEEGGGDVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 EITSHEEGGGDVSPR 15 0 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 EITSHEEGGGDVS(1)PR;EITSHEEGGGDVS(1)PR 261.64 5.4748e-25 176751000.0 113841.0 80003.0 87854.0 96896.0 99765.0 87679.0 101651.0 122690.0 108610.0 116044.0 True False 107526.01279359285 76159.53579304881 93517.20941136999 106104.96670715524 107615.93791479841 87131.76283812623 111926.87509815747 122264.41702606142 88889.16183529401 115015.9404408658 0.9348792209274347 0.6621650486108525 0.8130804221824439 0.9225240110235673 0.9356610701290399 0.757562495286678 0.973142285053118 1.0630214956067099 0.7728421077511026 1.0 16.81147429735676 -5.788048054613163 0.6392258503902408 0.9472004841634418 0.786629875361871 0.15541944181980805 0.10981040143013675 1.5614260417211936 1.3593454811508534 0.07521383418283939 0.13844850512836876 1.6291157612747312e-06 5.788048054613163 -0.1605706088015708 EIVHLQAGQCGNQIGAK ddPTM_KYSE-520_SHP099_60min_R1 3 EIVHLQAGQCGNQIGAK 17 0 P04350;M0R278;M0R2D3;M0QZL7;M0QY85;M0QYM7;M0QY37;M0QX14;M0R0X0;M0R042;M0R2T4;P68371 P04350;P68371 TUBB4A;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain 0 ;; 277.0 6.669099999999999e-30 3353050000.0 1686910.0 1582980.0 976340.0 1470410.0 1519400.0 1631310.0 1529250.0 1608310.0 1225040.0 1288150.0 False True 1593333.7395282842 1506931.264698577 1039276.4385992336 1610157.3243051139 1638968.1357965716 1621128.3891862787 1683841.5140417437 1602731.1479923765 1002603.6167453151 1276737.9931655347 1.2479723702572556 1.1802979724620735 0.8140091735050974 1.2611493767118982 1.2837153312348184 1.2697424200300211 1.3188622278458555 1.255332853390363 0.785285330359338 1.0 20.284031060893014 -7.755433428985937 24.99845650885483 0.892642629386337 1.2007007426615472 0.42746008951648273 0.14404567447438588 132.1323101844882 549989.1412042837 0.10999733929418588 0.039153601748270477 1.756170068843029e-08 7.755433428985937 0.30805811327521027 EIVLADVIDNDSWR ddPTM_KYSE-520_SHP099_60min_R1 3 EIVLADVIDNDSWR 14 0 E9PBS1;P22234;P22234-2;D6RF62 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 0 ;; 227.93 1.5474e-13 350180000.0 256752.0 372296.0 305339.0 175658.0 233662.0 334988.0 208720.0 243236.0 262022.0 261406.0 False True 242509.4547375771 354410.34133231116 325021.64049967384 192352.48350649662 252049.87004508227 332897.21563451097 229819.4545108992 242392.27108770935 214445.40983709978 259090.14621079052 0.9360041602673546 1.3679035907601442 1.2544731833809024 0.7424152802399614 0.9728269242629535 1.2848702295442471 0.8870250678075681 0.9355518711641927 0.8276864750488477 1.0 17.983094622015194 -5.232368283538047 24.928329005448838 0.9596417037287696 1.2043046810225566 0.29237591145762987 0.16712149185816264 876.2174439093295 751351.3775110751 0.046092832556968825 0.07981906293844838 5.856413275873766e-06 5.232368283538047 0.24466297729378705 EIYENMAPGENKR ddPTM_KYSE-520_SHP099_60min_R1 1 EIYENMAPGENKR 13 1 Q13200;C9JPC0;H7C2Q3 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 120.53 0.00024208 409150000.0 419170.0 361960.0 247680.0 257620.0 397360.0 352620.0 270880.0 257840.0 339070.0 262510.0 False True 395917.804505321 344570.89828696335 263645.8491020118 282104.1273437225 428629.9713308704 350419.16778225236 298263.19393403793 256945.61322030824 277503.4352591211 260184.36562968983 1.5216817641872273 1.3243336026476609 1.01330396414844 1.0842470363697034 1.6474086376924069 1.3468110081640732 1.1463532530565046 0.9875520867614652 1.06656460540016 1.0 17.98917474815209 -6.963267562609151 3.6985204819425554 1.0243226006946948 1.3118584063950802 0.3843553214609333 0.174185403250689 0.2821228265161849 8.18214484668659 0.08884246482076515 0.05502940597090923 1.0882594257171243e-07 6.963267562609151 0.2875358057003854 EKAEGDVAALNR ddPTM_KYSE-520_SHP099_60min_R1 4 EKAEGDVAALNR 12 1 P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YGX3 P67936 TPM4 Tropomyosin alpha-4 chain 0 ;;; 157.22 7.0904e-06 3648200000.0 3465840.0 3699180.0 2305610.0 2458510.0 3581490.0 3744710.0 2515800.0 3152020.0 3290530.0 3271370.0 False True 3273582.94621925 3521465.8402176183 2454233.3097064304 2692166.0512220184 3863332.887109428 3721337.8758603586 2770121.6158418898 3141086.378306997 2693052.699511007 3242388.2068873467 1.009620914382072 1.0860716285414147 0.7569214890719285 0.8303034305094716 1.1915084316255211 1.147715090980052 0.8543460681104478 0.9687570327435905 0.8305768858246326 1.0 21.62862540250597 EKAGS(ph)PAPSNR ddPTM_KYSE-520_SHP099_60min_R1 5 EKAGSPAPSNR 11 1 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 EKAGS(0.998)PAPS(0.002)NR;EKAGS(0.998)PAPS(0.002)NR;EKAGS(0.999)PAPS(0.001)NR;EKAGS(0.999)PAPS(0.001)NR;EKAGS(0.999)PAPS(0.001)NR 123.76 0.00013139 3329140000.0 4603320.0 4464300.0 4006500.0 3773130.0 3746950.0 4082000.0 3874160.0 3809950.0 4801230.0 3905020.0 True False 4347964.663109087 4249828.326949091 4264765.400626651 4131727.1407671003 4041813.6477707988 4056522.723858986 4265797.900957953 3796734.172699019 3929447.6611589123 3870424.5608595847 1.1233818395735493 1.0980263948111273 1.1018856803863106 1.0675126399697823 1.044281727809507 1.04808210574141 1.1021524470717392 0.9809606447556751 1.0152497741194106 1.0 21.884060398807847 -5.22825004089798 0.257380394981676 0.9870934207166832 1.1819297585091977 0.6741344550523691 0.026318272032699163 3.6022686957771546 0.30899355432017594 0.0422507183125628 0.21922340949456406 5.912211462431084e-06 5.22825004089798 0.19483633779251452 EKAPSIIFIDELDAIGTK ddPTM_KYSE-520_SHP099_60min_R1 1 EKAPSIIFIDELDAIGTK 18 1 E9PM69;P17980;R4GNH3;E9PKD5;E9PMD8;E9PN50 E9PM69 PSMC3 26S protease regulatory subunit 6A 0 177.73 7.8561e-09 209240000.0 1057100.0 421560.0 330280.0 459360.0 762930.0 452790.0 363390.0 455570.0 392330.0 323370.0 False True 998460.5557233948 401307.62482553953 351570.3772666842 503017.4362883796 822968.2505220986 449963.96965607733 400125.00754463184 453989.73400083714 321092.7618344622 320505.193378053 3.115271066904857 1.252109585482366 1.0969256802400331 1.569451748930145 2.567722044838642 1.4039209939581876 1.2484197317597379 1.4164816776161626 1.001833257209396 1.0 18.289988208504102 -4.257587386341841 24.893270793833615 1.4366723599454005 3.115271753931117 0.5869332032235735 0.4316343703880471 280.23688011871513 1810935.8248986148 0.11377155301910834 0.8343889079051564 5.526022051871925e-05 4.257587386341841 1.6785993939857164 EKAQEIQDESAVLWLDEIQGGIWQSNK ddPTM_KYSE-520_SHP099_60min_R1 2 EKAQEIQDESAVLWLDEIQGGIWQSNK 27 1 P46940;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 0 ; 132.23 4.4911000000000004e-05 83436000.0 126034.0 96657.0 78161.0 135311.0 87222.0 76767.0 78993.0 106669.0 93188.0 70286.0 False True 119042.6427774499 92013.45263488506 83199.38312202171 148170.91675726452 94085.87517470616 76287.8686777272 86978.38333738725 106298.99013573182 76267.40827831128 69663.3207216805 1.7088281400344105 1.3208306994508343 1.1943068785713016 2.1269574177957757 1.3505798201983346 1.0950937722666587 1.2485535061540352 1.5258961105287883 1.0948000682168955 1.0 16.088111624718053 -5.990186349654448 24.999021885880154 1.2285084601507057 1.5653402357639266 0.3227251464769312 0.26649353672652554 296.4219760705601 755091.6299496741 0.08370105169499914 0.09480219011335077 1.0228540058371226e-06 5.990186349654448 0.33683177561322086 EKAQPSSS(ph)EDELDNVFFK ddPTM_KYSE-520_SHP099_60min_R1 1 EKAQPSSSEDELDNVFFK 18 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 EKAQPS(0.041)S(0.308)S(0.651)EDELDNVFFK 138.35 5.245800000000001e-06 48841000.0 92793.0 90656.0 70485.0 51392.0 85166.0 74693.0 63338.0 61783.0 90742.0 62253.0 True False 87645.5873117406 86300.74968256986 75028.57587998737 56276.280228431766 91868.07967174583 74226.8132810385 69740.82315931078 61568.689193260565 74265.54021966906 61701.4868521011 1.4204777191484492 1.3986818484525887 1.2159929964059277 0.9120733243159344 1.4889119267409918 1.2029987779542606 1.130294045044328 0.9978477397285603 1.2036264279608704 1.0 15.913017634698974 -1.0000000000000002 0.23065742537260872 1.0483916864743024 3.1563821492137865 0.3346488383680387 0.1504887260389396 63.71083024019221 0.8346711941560078 0.22686815016201906 50.77030577534263 0.09999999999999995 1.0000000000000002 2.107990462739484 EKDDLS(ph)PQPLMTDFER ddPTM_KYSE-520_SHP099_60min_R1 6 EKDDLSPQPLMTDFER 16 1 Q5THJ4-2;Q5THJ4 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 EKDDLS(1)PQPLMTDFER;EKDDLS(1)PQPLMTDFER;EKDDLS(1)PQPLMTDFER;EKDDLS(1)PQPLMTDFER;EKDDLS(1)PQPLMTDFER;EKDDLS(0.891)PQPLMT(0.109)DFER 177.44 1.102e-08 2286364000.0 3120464.0 2656673.0 2400242.0 2419327.0 2708903.0 2565958.0 2345958.0 2540430.0 2953490.0 2472369.0 True False 2947365.641429239 2529042.441332526 2554965.4398429845 2649259.110682815 2922078.2545503085 2549942.90432821 2583110.328983712 2531617.8412708184 2417210.6674240218 2450465.734133977 1.2027777415426182 1.0320660297771187 1.0426448345118113 1.0811247322416013 1.1924583208191666 1.0405952096405826 1.0541303610175203 1.0331170136380305 0.9864290831547955 1.0 21.224624542417235 -7.049105376611569 1.3455484167776168 0.9985296949463943 1.0986578574680208 0.38052040405485266 0.055194814438156735 0.5438498984718226 1.850721460056656 0.042117541188778904 0.018942958189015757 8.930887596218773e-08 7.049105376611569 0.10012816252162648 EKDECT(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 EKDECTPTR 9 1 O15042-2;O15042;E7ET15;O15042-3;H7C4V2 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 EKDECT(0.997)PT(0.003)R;EKDECT(0.948)PT(0.052)R 137.4 0.0015568 1750260000.0 3753500.0 3482000.0 3020200.0 3347800.0 3494400.0 3456000.0 3224300.0 3553500.0 4070300.0 3381900.0 True False 3545285.8725832594 3314719.493411444 3214886.92449086 3665973.9054472256 3769389.3995837416 3434429.8220618907 3550243.7101355535 3541173.7378931376 3331236.123913061 3351938.9970783866 1.0576820985326396 0.9888961273760102 0.9591125993918793 1.09368753686823 1.1245399760762986 1.0246098825352743 1.0591611939328291 1.0564553057140036 0.9938236127855039 1.0 21.67656446256987 -5.263267405139641 24.99999991702742 1.055066619260124 1.000596861882184 0.1990542031670658 0.043776758442339275 241.70890164379512 3305606.919503254 0.012500588003782953 0.01959028148821874 5.45421928806806e-06 5.263267405139641 -0.0544697573779398 EKDECT(ph)PTRK ddPTM_KYSE-520_SHP099_60min_R1 6 EKDECTPTRK 10 2 O15042-2;O15042;E7ET15;O15042-3;H7C4V2 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 EKDECT(0.992)PT(0.008)RK;EKDECT(0.999)PT(0.001)RK;EKDECT(0.842)PT(0.158)RK;EKDECT(0.997)PT(0.003)RK;EKDECT(0.997)PT(0.003)RK;EKDECT(0.989)PT(0.011)RK 169.17 0.00011258 20384900000.0 14682160.0 12906950.0 10641580.0 11775270.0 12953650.0 13924120.0 12542010.0 12912320.0 15382690.0 14791030.0 True False 13867711.316639662 12286880.748273091 11327553.273930019 12894388.120435972 13973028.558813518 13837214.402189946 13809878.769021861 12867530.175678138 12589581.262058383 14659992.981447197 0.9459562043576556 0.8381232353809873 0.772684767875775 0.8795630486831972 0.953140194302749 0.9438759227034753 0.9420112810762468 0.8777309915470292 0.8587713021412082 1.0 23.80538107698519 -5.535240154597254 10.820762956841609 0.9238010951119812 0.84672561755435 0.29341637911970564 0.0539961550884617 0.41003274943125 345.2345545410971 0.01633889568042408 0.021388036278084915 2.91581419169382e-06 5.535240154597254 -0.07707547755763111 EKDECTPT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 EKDECTPTR 9 1 O15042-2;O15042;E7ET15;O15042-3;H7C4V2 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 EKDECT(0.097)PT(0.903)R 101.89 0.009857600000000001 448930000.0 1459500.0 1187600.0 1113800.0 1186300.0 1244700.0 1214400.0 1219300.0 1311100.0 1432300.0 1168800.0 True False 1378538.6255588804 1130545.913376057 1185597.3301430084 1299045.5953259007 1342650.8086257665 1206820.4791411916 1342558.74322125 1306552.1001130398 1172230.4253447368 1158445.34131264 1.189990219130107 0.9759164917483547 1.0234382994709117 1.1213697780975542 1.1590109267515396 1.041758670956143 1.1589314535116435 1.127849587303428 1.011899641304161 1.0 20.143758544750487 -4.201488271307287 22.11766204904043 1.0779026152686577 1.1899940702187621 0.2262794330048472 0.0652897026291979 37146.643221884166 13702292.186603593 0.016621681254185984 32.32042865052046 6.28798835426908e-05 4.201488271307287 0.11209145495010442 EKDFLLK ddPTM_KYSE-520_SHP099_60min_R1 1 EKDFLLK 7 1 P40222 P40222 TXLNA Alpha-taxilin 0 73.248 0.026364999999999996 659070000.0 1334700.0 1240700.0 834930.0 726590.0 1422400.0 1271800.0 915170.0 967440.0 1031100.0 1158600.0 False True 1260661.5303415142 1181094.9096713336 888750.9237352327 795644.8951427515 1534334.7876510755 1263862.224449745 1007684.3147984829 964084.176442193 843878.2319157694 1148335.7053771608 1.0978161912395303 1.028527550036784 0.773946956080522 0.6928678533786676 1.336137838844902 1.100603437245418 0.8775171842867308 0.8395490725645842 0.734870672368935 1.0 20.131113031618796 -6.933507658245783 8.231396778483644 0.843949310939439 0.9962801938764665 0.13109635147298437 0.17762593553925735 0.581934717315664 64.00917138950602 0.08062342279542774 0.05423406921192039 1.1654464994491299e-07 6.933507658245783 0.15233088293702746 EKDFS(ph)PEALK ddPTM_KYSE-520_SHP099_60min_R1 4 EKDFSPEALK 10 1 E5RGU4;A0A087WZK9;B3KS98;O15372;E5RJT0 E5RGU4 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 EKDFS(1)PEALK;EKDFS(1)PEALK;EKDFS(1)PEALK;EKDFS(1)PEALK 112.72 0.00041960000000000006 2684720000.0 5333180.0 4546710.0 4690370.0 4615490.0 4497710.0 5202370.0 4679130.0 4974830.0 5517590.0 4842720.0 True False 5037337.873969245 4328279.226849156 4992718.755057343 5054144.781902325 4851654.188530726 5169900.079108829 5152142.124308081 4957573.475864054 4515734.743124951 4799817.2683791425 1.0494853433598132 0.9017591680757421 1.0401893396961217 1.0529869158142071 1.0107997695022855 1.0771035208293793 1.0734038060677913 1.0328671277809258 0.9408138874107338 1.0 22.19454805202852 -1.8220690259454764 17.165654535265176 1.0202037855821309 1.0317362326669757 0.0 0.05421093960783927 0.0 0.0 0.012665437350465178 0.0 0.0150636762793092 1.8220690259454764 0.011532447084844799 EKDFS(ph)PEALKK ddPTM_KYSE-520_SHP099_60min_R1 6 EKDFSPEALKK 11 2 E5RGU4;A0A087WZK9;B3KS98;O15372;E5RJT0 E5RGU4 EIF3H Eukaryotic translation initiation factor 3 subunit H 1 EKDFS(1)PEALKK;EKDFS(1)PEALKK;EKDFS(1)PEALKK;EKDFS(1)PEALKK;EKDFS(1)PEALKK;EKDFS(1)PEALKK 127.71 0.00010561 7728710000.0 7707350.0 6607300.0 6123890.0 5998320.0 6359630.0 6267690.0 5773630.0 6005870.0 7582510.0 5858050.0 True False 7279807.93127868 6289875.390240502 6518645.747970439 6568398.529339337 6860096.699655083 6228571.021828443 6357284.8655987065 5985037.038750603 6205717.323522098 5806152.234493938 1.2538093452028105 1.0833121723665458 1.1227135432728799 1.1312825196550906 1.181522017094167 1.0727536534135196 1.0949221806191247 1.0308095270382203 1.0688175357604943 1.0 22.469150968548508 -1.00000000000007 0.09612692184238265 0.9228917968942386 1.6789829053589673 0.605481244230188 0.043717536207218806 100.58867051337332 0.6906654805369822 0.652468271198837 10.023895449541017 0.0999999999999839 1.00000000000007 0.7560911084647287 EKDFSPEALKK ddPTM_KYSE-520_SHP099_60min_R1 2 EKDFSPEALKK 11 2 E5RGU4;A0A087WZK9;B3KS98;O15372;E5RJT0 E5RGU4 EIF3H Eukaryotic translation initiation factor 3 subunit H 0 ; 84.365 0.0029881 1729710000.0 1339580.0 1103870.0 790630.0 648160.0 1128190.0 1077010.0 733060.0 910300.0 996870.0 879610.0 False True 1265270.8270134742 1050838.428257351 841595.274852727 709760.9315235903 1216972.1344769853 1070287.9810934248 807164.858776157 907142.3817656175 815863.5370476912 871817.3397262241 1.4513026632514627 1.2053424271044493 0.9653344072245825 0.8141165576569925 1.3959026495838565 1.227651633345038 0.9258417124734296 1.0405188569092771 0.9358193509937482 1.0 19.733666372425876 -4.413653297372105 3.057143846353417 1.0479102815139936 1.4594376789338228 0.39644068133471877 0.15709853482499325 0.32339972371387726 5.001505445064992 0.043108534207771124 0.2610854018829445 3.857862126469782e-05 4.413653297372105 0.41152739741982924 EKDKDEKYS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 EKDKDEKYSPK 11 3 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 EKDKDEKY(0.001)S(0.999)PK;EKDKDEKYS(1)PK;EKDKDEKYS(1)PK 102.38 0.0016699000000000002 7542100000.0 8528900.0 7140200.0 7372400.0 7240200.0 7705400.0 7331200.0 7105300.0 7815800.0 9323200.0 5821200.0 True False 8055784.915059366 6797174.074341305 7847636.700257067 7928306.431154485 8311771.142271214 7285443.261429441 7823573.06504548 7788688.8140214365 7630341.898746106 5769628.696825064 1.396239747540832 1.178095581450793 1.360163211988927 1.3741450009629401 1.4406076333551674 1.2627230701064882 1.355992469558859 1.3499462830783946 1.3225013774187866 1.0 22.46004704686296 -8.20813723272918 6.404843540274466 1.0000000240240396 1.3374654852492833 0.6845315335767419 0.06887514004675489 8.749923042179345 269.38293791557885 0.06635356795928185 0.017201866388032727 6.19245368791116e-09 8.20813723272918 0.3374654612252437 EKDKEPFTFSS(ph)PASGR ddPTM_KYSE-520_SHP099_60min_R1 2 EKDKEPFTFSSPASGR 16 2 H0YEX2;Q6P1X5 H0YEX2 TAF2 Transcription initiation factor TFIID subunit 2 1 EKDKEPFT(0.089)FS(0.274)S(0.635)PAS(0.002)GR;EKDKEPFTFS(0.024)S(0.975)PASGR 163.91 3.52e-08 2180110000.0 2549130.0 2297000.0 2225460.0 2208700.0 2209610.0 2385660.0 2025400.0 2197090.0 2726960.0 2190950.0 True False 2407724.677335329 2186648.6721327095 2368916.7124618986 2418614.1839301316 2383493.736038869 2370770.211024358 2230147.1979991123 2189468.8075946597 2231812.805067428 2171539.8875333047 1.108763735429383 1.0069576362313875 1.0908925624906656 1.1137783827113963 1.0976053213309043 1.0917461035990284 1.0269888252121313 1.0082563162501799 1.0277558417785218 1.0 21.050287022239388 -6.836665173605309 4.763073651393512 1.0145091928171401 1.08357805223081 0.5853853928241856 0.02864648401724415 0.1666815122356431 6.959016957744692 0.012912208272742328 0.008671932336380235 1.4565816230990148e-07 6.836665173605309 0.06906885941366991 EKDLDLEPLS(ph)DLEEGLEETR ddPTM_KYSE-520_SHP099_60min_R1 6 EKDLDLEPLSDLEEGLEETR 20 1 P29375-2;P29375 P29375-2 KDM5A Lysine-specific demethylase 5A 1 EKDLDLEPLS(1)DLEEGLEETR;EKDLDLEPLS(1)DLEEGLEETR;EKDLDLEPLS(1)DLEEGLEETR;EKDLDLEPLS(1)DLEEGLEETR;EKDLDLEPLS(1)DLEEGLEETR;EKDLDLEPLS(1)DLEEGLEETR 244.14 1.4862e-26 786333000.0 840673.0 879676.0 735390.0 762191.0 753170.0 744690.0 678342.0 731978.0 927258.0 776458.0 True False 794039.192849922 837415.044539405 782794.4160656027 834629.4034789199 812440.1940489018 740042.1134812706 746915.4293399403 729438.9391629499 758891.3214719741 769579.1861951828 1.0317836125164326 1.0881466905044617 1.017172020901132 1.084526996637405 1.055694084017039 0.9616191897549307 0.970550455025567 0.9478413037251082 0.9861120662890459 1.0 19.553710255380718 -6.257707746594275 24.85500512973891 0.9697975483802558 1.0567675553400735 0.7479187789040194 0.023824931814282004 134.96828483864616 898973.7471114764 0.0075003854962157395 0.007230928665610761 5.524490783848335e-07 6.257707746594275 0.08697000695981771 EKDLEDLFYK ddPTM_KYSE-520_SHP099_60min_R1 6 EKDLEDLFYK 10 1 Q13242;H0YIB4;S4R3G0 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 0 ;;;;; 116.55 0.00064439 3434918000.0 8750010.0 7582910.0 5304470.0 4572100.0 8316760.0 7824650.0 5965370.0 5861390.0 5916960.0 6254040.0 False True 8264629.502587511 7218615.621420044 5646404.623652076 5006631.009348012 8971241.696108649 7775813.456943459 6568407.816000777 5841058.206148709 4842589.218423362 6198634.071169493 1.3332984989430468 1.164549405326989 0.9109111069992187 0.807699075613188 1.4472933219005215 1.2544398278178084 1.0596540690393617 0.9423137644656414 0.7812348918847718 1.0 22.563518908072645 -7.217940350405528 3.0643366009741717 0.8875440627419632 1.1403522332282936 0.2610573022185665 0.18304832069588106 0.4019425852631004 7.528983589393502 0.11430899597969826 0.055629203879578995 6.054240229840278e-08 7.217940350405528 0.2528081704863304 EKDLLPS(ph)PAGPVPSK ddPTM_KYSE-520_SHP099_60min_R1 2 EKDLLPSPAGPVPSK 15 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 EKDLLPS(1)PAGPVPSK;EKDLLPS(1)PAGPVPSK 113.99 0.00011472 1821600000.0 1779580.0 1430860.0 1195160.0 1249230.0 1346320.0 1538740.0 1458120.0 1635970.0 1616980.0 1547230.0 True False 1680863.1498952191 1362119.337835353 1272201.925923613 1367956.4436053063 1452267.7244870597 1529136.1528933768 1605520.99947984 1630295.2019082683 1323377.1927486781 1533522.7459267268 1.0960796990849018 0.8882289757053505 0.829594428450949 0.892035313619449 0.9470141400540077 0.9971395318100097 1.046949583072277 1.063104675974702 0.8629654801428751 1.0 20.548418134815524 -6.132686152881472 3.40476421931739 1.0014065100181275 0.9170978354884627 0.1274282450832851 0.08143142910027353 0.45412201734451213 9.739821104978077 0.028801876178564282 0.028982072245205638 7.367393169760708e-07 6.132686152881472 -0.08430867452966484 EKDLLPS(ph)PAGPVPSKDPK ddPTM_KYSE-520_SHP099_60min_R1 6 EKDLLPSPAGPVPSKDPK 18 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 EKDLLPS(1)PAGPVPSKDPK;EKDLLPS(1)PAGPVPSKDPK;EKDLLPS(1)PAGPVPSKDPK;EKDLLPS(1)PAGPVPSKDPK;EKDLLPS(0.999)PAGPVPS(0.001)KDPK;EKDLLPS(1)PAGPVPSKDPK 120.64 3.9395e-05 4929000000.0 5079430.0 4498690.0 4464490.0 4037750.0 4095830.0 4235280.0 4212960.0 4258150.0 5408250.0 4409320.0 True False 4797663.892307333 4282566.17972864 4752278.168836565 4421496.546006193 4418148.518915139 4208846.046522655 4638847.111327312 4243379.471509683 4426248.130887854 4370256.855199047 1.0977990656544188 0.9799346632530107 1.087413926983044 1.0117246405657345 1.0109585466719462 0.9630660590385274 1.061458688820255 0.9709679801683909 1.0128118958550907 1.0 22.05928664374845 -5.493328478429395 21.658503889452952 1.0034529491069304 1.0478764054608527 0.26225234856735147 0.03857259996550485 195.98859006428376 143646.00790913557 0.010163822079266775 0.015027522057163125 3.2112308069656493e-06 5.493328478429395 0.04442345635392231 EKDNNT(ph)VDMVDPIEIADETTWIK ddPTM_KYSE-520_SHP099_60min_R1 2 EKDNNTVDMVDPIEIADETTWIK 23 1 A0A087WV86;Q6PGQ7;Q6PGQ7-2 A0A087WV86 BORA Protein aurora borealis 1 EKDNNT(1)VDMVDPIEIADETTWIK;EKDNNT(1)VDMVDPIEIADETTWIK 96.79299999999999 0.006272600000000001 446990000.0 59775.0 54897.0 42472.0 43798.0 49470.0 65094.0 50999.0 60436.0 65191.0 67596.0 True False 56459.16159149174 52259.66571792304 45209.81307760273 47960.54875165115 53363.00755420319 64687.724200606724 56154.47662227548 60226.36162186844 53353.957731375194 66997.1520288922 0.8427098746995095 0.7800281673971202 0.6748020133468691 0.7158595149084604 0.7964966560248807 0.965529462695824 0.8381621445350262 0.8989391309632999 0.7963615783006202 1.0 16.031812149132968 -6.046792914147849 6.454226974405522 0.8893069103248539 0.7501964295704053 0.5139122211001566 0.06763442114089441 0.1898123631808832 20.03328875193406 0.022248764468785827 0.02263221725313933 8.978568200223537e-07 6.046792914147849 -0.13911048075444854 EKDQADFR ddPTM_KYSE-520_SHP099_60min_R1 4 EKDQADFR 8 1 Q96I24;Q96I24-2 Q96I24 FUBP3 Far upstream element-binding protein 3 0 ;;; 90.906 0.004679699999999999 2474180000.0 11472200.0 11012600.0 7557500.0 6878300.0 10926300.0 11210000.0 8502800.0 9498600.0 9638100.0 9573600.0 False True 10835814.19673627 10483538.165750407 8044668.542427539 7532011.563963689 11786137.64785708 11140034.231861621 9362346.003331117 9465651.573589906 7888063.996729105 9488785.352148084 1.1419600923192181 1.104834578577239 0.847808043271458 0.7937803717162368 1.2421123684907591 1.1740211015880684 0.9866748646824071 0.9975619873672302 0.8313038712529622 1.0 23.177791990755306 -7.435035062261735 2.8576319737147213 0.9169390255518695 1.0402786618636843 0.11106404354358923 0.13758081689917834 0.6894513916054679 10.63573452195264 0.10737024944580334 0.04093779329028293 3.672526495840934e-08 7.435035062261735 0.12333963631181488 EKDRDPEAQFEMPYVVR ddPTM_KYSE-520_SHP099_60min_R1 1 EKDRDPEAQFEMPYVVR 17 2 O14744-4;O14744-3;O14744-5;O14744-2;O14744;H0YJD3;H7BZ44 O14744-4 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed 0 212.9 3.8502999999999995e-18 716810000.0 770380.0 609560.0 411470.0 443580.0 796810.0 612000.0 584850.0 571730.0 544230.0 549940.0 False True 727645.4856855446 580275.8226317869 437994.0145752777 485737.70983280987 859514.413771268 608180.2809901271 643972.3455859493 569746.8020727858 445411.5509218504 545067.959446846 1.3349628666927782 1.0645935292558217 0.8035585416170293 0.8911507297654285 1.5768940347246483 1.1157879865243403 1.1814533113255727 1.045276634221877 0.8171670031272239 1.0 19.056076591747566 -7.558327267827645 5.797251567503528 0.911352250216861 1.128327912961413 0.16171423847756794 0.20725215521998727 0.37693455992050734 34.23404646208844 0.15124822567689455 0.05651980350854401 2.7648573686867558e-08 7.558327267827645 0.21697566274455204 EKDRES(ph)EKDR ddPTM_KYSE-520_SHP099_60min_R1 3 EKDRESEKDR 10 3 O75400-3;O75400;O75400-2 O75400-3 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 EKDRES(1)EKDR;EKDRES(1)EKDR;EKDRES(1)EKDR 107.53 0.0012837999999999999 3601200000.0 2553730.0 2517950.0 1073620.0 1124140.0 2630250.0 4708060.0 2377400.0 1271530.0 1818570.0 9547600.0 True False 2412069.506165456 2396983.9024799983 1142827.2630527355 1230977.9276149855 2837235.7109246617 4678675.251173811 2617730.793188057 1267119.359207334 1488363.5304190305 9463015.691920405 0.2548943787787332 0.25330021427805105 0.12076776582210363 0.13008304833162262 0.2998236295166577 0.49441693890125316 0.27662754436971876 0.13390227813837507 0.1572821581274357 1.0 23.173868586975132 -10.364760061253055 3.1448238930798182 1.0076459630218928 0.23741809504803477 0.8214139054967854 0.10691272561526625 30161344.294438906 39581029.19523779 2117994.709728133 0.03077371084665069 4.317575480897918e-11 10.364760061253055 -0.770227867973858 EKDRQS(ph)PLHGNHITISHTQATGSR ddPTM_KYSE-520_SHP099_60min_R1 3 EKDRQSPLHGNHITISHTQATGSR 24 2 Q86VQ1;H7C2L5 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 EKDRQS(1)PLHGNHITISHTQATGSR;EKDRQS(1)PLHGNHITISHTQATGSR;EKDRQS(1)PLHGNHITISHTQATGSR 140.73 2.4925e-06 1366158000.0 298392.0 351794.0 510418.0 1418270.0 224656.0 252041.0 413085.0 331184.0 338565.0 197239.0 True False 281839.60093029536 334893.28818644036 543320.3609776759 1553061.9543815753 242335.14908221312 250467.91862913826 454843.66312109446 330035.2000029267 277090.1305291074 195491.6159096199 1.4416966150640242 1.7130826129201824 2.779251470451116 7.944391615748832 1.2396191414891675 1.2812207698203033 2.3266658317018503 1.6882319912661077 1.4174016069170574 1.0 17.576747210128083 EKDS(ph)PFKPK ddPTM_KYSE-520_SHP099_60min_R1 6 EKDSPFKPK 9 2 Q15291 Q15291 RBBP5 Retinoblastoma-binding protein 5 1 EKDS(1)PFKPK;EKDS(1)PFKPK;EKDS(1)PFKPK;EKDS(1)PFKPK;EKDS(1)PFKPK;EKDS(1)PFKPK 101.6 0.0017046 16931500000.0 15079800.0 12014000.0 11415000.0 11753300.0 12786600.0 12872600.0 12516300.0 13363700.0 13904300.0 12360400.0 True False 14243293.433163982 11436829.406618359 12150829.164645776 12870330.098241495 13792832.674198005 12792257.328551488 13781569.751316447 13317344.443811012 11379629.618879287 12250896.472245699 1.1626327481774124 0.933550408537726 0.9918318379535225 1.0505623100643384 1.1258631321753105 1.0441894891147139 1.1249437771789579 1.0870506067846823 0.928881379796143 1.0 23.546383988030517 -4.210814709974116 22.903986664544806 1.040158131989171 1.162634566392716 0.24897966115650305 0.0667481730378081 27806.8269239259 12579558.553192314 0.01726260383078219 13.76391358717201 6.154393914908908e-05 4.210814709974116 0.12247643440354494 EKDS(ph)PHMQDPNQADEEAMTQIIR ddPTM_KYSE-520_SHP099_60min_R1 3 EKDSPHMQDPNQADEEAMTQIIR 23 1 P23511-2;P23511 P23511-2 NFYA Nuclear transcription factor Y subunit alpha 1 EKDS(1)PHMQDPNQADEEAMTQIIR;EKDS(1)PHMQDPNQADEEAMTQIIR;EKDS(1)PHMQDPNQADEEAMTQIIR 197.35 1.8082e-15 710200000.0 382190.0 364110.0 328796.0 315086.0 321175.0 367178.0 350408.0 336263.0 438562.0 322760.0 True False 360989.1588231239 346617.6090597478 349990.71625220054 345031.6787059401 346449.64526422473 364886.3059042367 385830.6602925213 335096.58213737427 358930.1960483401 319900.59750348027 1.12844165231419 1.0835166041100528 1.0940608394718392 1.0785590317698184 1.0829915541513035 1.1406240211860406 1.2060954662278296 1.0475022077247875 1.1220053943301411 1.0 18.287264161527794 -9.142151316303092 1.247656557760941 0.9994870407571365 1.1088434662584623 0.3826912463586132 0.041564014650746266 26.941139509222975 27.551725255899655 0.11024998695932071 0.012408581038995016 7.208562756430689e-10 9.142151316303092 0.10935642550132585 EKDVADGNVS(ph)DFDNEEEEQSVPPK ddPTM_KYSE-520_SHP099_60min_R1 4 EKDVADGNVSDFDNEEEEQSVPPK 24 1 O43156 O43156 TTI1 TELO2-interacting protein 1 homolog 1 EKDVADGNVS(1)DFDNEEEEQSVPPK;EKDVADGNVS(1)DFDNEEEEQSVPPK;EKDVADGNVS(1)DFDNEEEEQSVPPK;EKDVADGNVS(0.997)DFDNEEEEQS(0.003)VPPK 246.69 7.8008e-29 1498120000.0 1323863.0 1243693.0 1045537.0 1235704.0 1305796.0 1197567.0 1207580.0 1392224.0 1482605.0 1312073.0 True False 1250425.680334539 1183944.1214587481 1112933.987938348 1353144.9366320437 1408554.7162370782 1190092.540138078 1329653.9712450732 1387394.6998915253 1213401.305430588 1300449.0539973474 0.9615337690399747 0.9104117672426428 0.8558074493709602 1.0405212972186173 1.0831294866242036 0.9151396869257944 1.0224575635300401 1.0668581715115426 0.9330633150916677 1.0 20.310578451123295 -5.269898265783644 24.996403536966884 1.011295562779239 0.9093670713603728 0.406254706993152 0.05505539966766133 595.1158980362083 1758594.821998119 0.015523245379923672 0.023451821269999066 5.37157611711804e-06 5.269898265783644 -0.10192849141886628 EKDVQFEHGYR ddPTM_KYSE-520_SHP099_60min_R1 2 EKDVQFEHGYR 11 1 A0A0C4DFM1;Q92544 A0A0C4DFM1 TM9SF4 Transmembrane 9 superfamily member 4 0 ; 140.24 9.4467e-05 898000000.0 722160.0 774330.0 500180.0 650500.0 955920.0 837630.0 722590.0 800760.0 894850.0 608400.0 False True 682100.3452097308 737130.0245069735 532422.4031162963 712323.3244200428 1031145.4655592049 832402.0404669279 795636.4489988042 797982.3504587886 732367.7973327779 603010.0493280373 1.1311591671976737 1.2224174793245857 0.882941177696126 1.181279358799772 1.709997149646609 1.3804115559840386 1.3194414419551044 1.3233317609681932 1.214520053436738 1.0 19.201822519671484 -5.532537053089421 24.999711748859852 1.3526166943539766 1.0830159039514424 0.26247711576509936 0.18320514002687688 243.4141083707794 630053.3903897699 0.053543625743770876 0.06920914242820596 2.934019168948415e-06 5.532537053089421 -0.26960079040253415 EKEAVIT(ph)PVASATQSVSR ddPTM_KYSE-520_SHP099_60min_R1 2 EKEAVITPVASATQSVSR 18 1 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 EKEAVIT(1)PVASATQSVSR;EKEAVIT(1)PVASATQSVSR 170.65 4.4929e-08 4686500000.0 3972000.0 4635200.0 3546700.0 3087200.0 2958200.0 4234100.0 3373500.0 3608400.0 4927200.0 4480100.0 True False 3751665.242014304 4412518.034422953 3775325.9569206424 3380606.5597994775 3190993.5101444055 4207673.411340347 3714526.302187226 3595883.302606894 4032544.684604193 4440409.799465058 0.844891667986651 0.9937186506872708 0.8502201660250954 0.7613276054400977 0.7186259048722999 0.9475867321631554 0.8365278138595945 0.8098088836395448 0.908146965419723 1.0 22.08226139643422 -9.81166932737489 9.264125331986612 0.99999838185128 0.8508934978513826 0.2448765543972805 0.07776511066690171 0.0 0.0 0.0790068939311273 0.019161986401765224 1.5428747535383347e-10 9.81166932737489 -0.1491048839998974 EKEDDEEEEDEDAS(ph)GGDQDQEER ddPTM_KYSE-520_SHP099_60min_R1 2 EKEDDEEEEDEDASGGDQDQEER 23 1 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 1 EKEDDEEEEDEDAS(1)GGDQDQEER;EKEDDEEEEDEDAS(1)GGDQDQEER 174.53 6.9164e-11 121739000.0 153125.0 139785.0 121446.0 126273.0 131496.0 141227.0 143666.0 149396.0 162142.0 128533.0 True False 144630.85100288026 133069.51877843752 129274.6034804705 138273.94795463822 141843.9870901052 140345.5499075043 158189.16132504243 148877.78014528845 132701.10006719694 127394.2976171609 1.1353008235699669 1.0445484709082624 1.0147597333513325 1.0854013919066636 1.1134249314389864 1.101662731633906 1.2417287451941117 1.1686377093006834 1.0416565148464005 1.0 16.958941176021895 -5.743101341143209 2.647720490654899 1.12750725679519 1.0616019824125216 0.056070853151117594 0.06863476196107497 0.5413029968306421 7.771650568231034 0.022546906242121897 0.028735059681295493 1.8067524772598514e-06 5.743101341143209 -0.06590527438266847 EKEDDEEEEDEDAS(ph)GGDQDQEERR ddPTM_KYSE-520_SHP099_60min_R1 1 EKEDDEEEEDEDASGGDQDQEERR 24 2 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 1 EKEDDEEEEDEDAS(1)GGDQDQEERR 94.721 0.0019948 19116000.0 10097.0 11484.0 11031.0 8555.9 9695.8 9667.5 5582.0 8349.8 12323.0 8863.1 True False 9536.89928212951 10932.291402164568 11742.075910224037 9369.050163574864 10458.804298444373 9607.161546522957 6146.283035070134 8320.836492657974 10085.453837550218 8784.579829387461 1.0856409148022401 1.24448654511537 1.3366690426038053 1.0665336698554604 1.1905867442237876 1.0936392784984064 0.699667275435154 0.9472093889820313 1.1480860819103587 1.0 13.100757567759063 -6.532160962562279 24.971958431284975 0.9375288343887108 1.1851833226384256 0.4427892406573597 0.12465522811361367 186.14448464809186 500779.42573973356 0.04864141342414933 0.03772860302739267 2.93656107262404e-07 6.532160962562279 0.2476544882497148 EKEEETKT(ph)SNGDLSDSTVSADPVVK ddPTM_KYSE-520_SHP099_60min_R1 1 EKEEETKTSNGDLSDSTVSADPVVK 25 2 A0A087X256;Q2M389 A0A087X256 KIAA1033 WASH complex subunit 7 1 EKEEET(0.062)KT(0.467)S(0.467)NGDLS(0.004)DSTVSADPVVK 106.05 0.0009356 468990000.0 600460.0 594280.0 576830.0 589590.0 559200.0 597060.0 553080.0 617670.0 728400.0 547850.0 True False 567151.2868126656 565729.8967675341 614013.3847606328 645624.4563333022 603205.8585872331 593333.5270718384 608990.7239406283 615527.446935261 596140.9214697385 542996.4752208502 1.0444842880094038 1.0418666097923337 1.1307870543927532 1.189003033713452 1.1108835620744946 1.0927023547077628 1.1215371585845684 1.1335754006228322 1.097872543697955 1.0 19.0505833074611 -4.755519152542142 24.972096502263906 1.1170280314029208 1.043175409978646 0.24481219981910096 0.04512125135123329 163.78378267922272 690836.1626547513 0.01111459150942869 0.027775606432539457 1.7558234600484953e-05 4.755519152542142 -0.07385262142427473 EKEEKESEDKPEIEDVGS(ph)DEEEEK ddPTM_KYSE-520_SHP099_60min_R1 3 EKEEKESEDKPEIEDVGSDEEEEK 24 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EKEEKESEDKPEIEDVGS(1)DEEEEK;EKEEKESEDKPEIEDVGS(1)DEEEEK;EKEEKESEDKPEIEDVGS(1)DEEEEK 149.07 8.749e-07 6645600000.0 3727340.0 3223490.0 2840570.0 2981820.0 2911020.0 3030980.0 2807900.0 2919480.0 3719130.0 2412450.0 True False 3520577.019931921 3068628.7018428626 3023677.6872726926 3265211.2762831235 3140100.712561885 3012062.529535057 3091749.934463172 2909353.0052917553 3043829.743637761 2391077.569857697 1.4723809316405594 1.283366437177314 1.2645669573374168 1.3655814923969405 1.3132575672769853 1.2597092488782442 1.2930362333026173 1.2167539196417216 1.2729949801749476 1.0 21.189229503151946 -13.884845534043428 0.13507460770128105 1.2106304725360748e-10 1.4193540710445747 0.7729360340546205 0.05399127972765751 63.85514446372103 0.5514191380395043 17.24551578007403 0.3665227637710035 1.3036303595315444e-14 13.884845534043428 1.4193540709235117 EKEELDR ddPTM_KYSE-520_SHP099_60min_R1 2 EKEELDR 7 1 Q16543;K7EKQ2;K7EQA9 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed 0 ; 78.516 0.018767 2553500000.0 8058800.0 7825300.0 5644600.0 4437800.0 7401800.0 7665500.0 5929600.0 6748600.0 6807100.0 6557300.0 False True 7611762.299180487 7449360.841985233 6008459.94767933 4859567.177726782 7984279.549518918 7617656.771127148 6529021.835319222 6725190.681735085 5571102.233026707 6499207.423502199 1.1711831617583257 1.146195275295742 0.9244911811787625 0.7477168923942619 1.2285004969446665 1.1720901141853777 1.0045873919501644 1.0347708948964598 0.8571971734400549 1.0 22.631832361941953 -4.667202345602475 7.268211436436448 1.0036312534525733 1.1633750605018307 0.19490044192626166 0.131643712712049 0.3984426955462779 26.188426229051604 0.035911827278748296 0.09605533857454993 2.151778948659378e-05 4.667202345602475 0.1597438070492574 EKEELMER ddPTM_KYSE-520_SHP099_60min_R1 4 EKEELMER 8 1 P26038;A0A2R8Y7M3;A0A2R8Y5S7;P35241;P35241-5;P35241-4 P26038;A0A2R8Y7M3 MSN;RDX Moesin;Radixin 0 ;;; 134.23 0.00082127 3751570000.0 5375500.0 4962800.0 3245780.0 3008010.0 5401600.0 5273100.0 3807830.0 4537590.0 4529130.0 4201600.0 False True 5077310.299206424 4724379.6386853345 3455008.172231623 3293890.366008813 5826675.189100138 5240188.626942868 4192762.6172395437 4521850.159371469 3706754.162076106 4164377.092795331 1.2192244328666901 1.13447450444842 0.8296578564436523 0.7909683231394866 1.3991708866088763 1.2583367236383967 1.0068162713922622 1.0858407052508745 0.8901101123836874 1.0 21.989669282839873 -7.745911394127284 23.219066064249994 0.9450551430182967 1.086429854166282 0.09732890765366609 0.17689193612382603 244.49834803982696 365608.083205927 0.13089309267052324 0.04897680709674836 1.795099830340202e-08 7.745911394127284 0.14137471114798528 EKEELMLR ddPTM_KYSE-520_SHP099_60min_R1 6 EKEELMLR 8 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ;;;;; 133.13 0.00083942 4420740000.0 5121870.0 4907120.0 3146820.0 3300980.0 5295710.0 4896720.0 3845940.0 4426350.0 4295830.0 4132050.0 False True 4837749.660905294 4671374.58946271 3349669.0522900205 3614704.1467241743 5712452.248531819 4866157.754133941 4234725.147957294 4410996.024967859 3515815.5610617017 4095443.2516862527 1.1812517873159163 1.1406273515178909 0.8179014691293384 0.8826160990598174 1.3948312545118973 1.188188299796452 1.0340089918749806 1.0770497242640782 0.8584700959082034 1.0 21.965588173181406 -7.702779167170026 8.934621872234723 0.9297400162719193 1.0872011301573894 0.1442200052633914 0.1561560801898675 0.5862743984943001 82.58321545825146 0.11523733659344464 0.04306273694881629 1.982534861527618e-08 7.702779167170026 0.15746111388547013 EKEEPPS(ph)PIEAT(ph)PPQSLLEK ddPTM_KYSE-520_SHP099_60min_R1 1 EKEEPPSPIEATPPQSLLEK 20 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 2 EKEEPPS(1)PIEAT(0.996)PPQS(0.004)LLEK 91.1 0.0013405 305700000.0 639330.0 583880.0 543680.0 607780.0 540610.0 600830.0 656210.0 689830.0 748640.0 650060.0 True False 603865.0904272415 555829.528378253 578726.4827187564 665543.2284642798 583152.9313498645 597079.9971034285 722546.1107924347 687437.1407375322 612705.8476786165 644300.9741390273 0.9372406913309113 0.8626861524165818 0.8982238207727415 1.0329694586503433 0.9050939774367495 0.9267097537781939 1.1214419033867915 1.0669503358366752 0.9509621625163132 1.0 19.29737525045408 -6.729653632576152 24.384524995461778 1.0404177715015683 0.9267155863964643 0.45129582776354127 0.058038349571186136 134.91739332093624 103501.95529739535 0.022847346507079494 0.01769554098115231 1.8635728188742503e-07 6.729653632576152 -0.11370218510510399 EKEEPPS(ph)PIEATPPQSLLEK ddPTM_KYSE-520_SHP099_60min_R1 4 EKEEPPSPIEATPPQSLLEK 20 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 EKEEPPS(1)PIEATPPQSLLEK;EKEEPPS(1)PIEATPPQSLLEK;EKEEPPS(1)PIEATPPQSLLEK;EKEEPPS(1)PIEATPPQSLLEK 204.79 6.464299999999999e-14 4625400000.0 4168390.0 3911510.0 3047450.0 2752030.0 2896630.0 3957820.0 3672890.0 4580810.0 4427730.0 4602960.0 True False 3937161.097220543 3723595.1883037924 3243893.5030923965 3013582.103772011 3124578.301429788 3933117.777301218 4044181.5651520514 4564920.239279091 3623765.845990121 4562181.355448687 0.8629996903823929 0.8161874546825374 0.7110400158069476 0.6605572792876463 0.6848869122000276 0.8621134213798475 0.8864578696158186 1.000600345233346 0.7943055226557793 1.0 22.121292367005797 -6.4767575632107555 3.5866090423419434 0.917838612757291 0.7446000782541166 0.5239789605889635 0.07825719752633711 0.2063302629655625 5.415654405709825 0.03146406229507139 0.02608192759213484 3.336125937966009e-07 6.4767575632107555 -0.1732385345031744 EKEES(ph)PQPR ddPTM_KYSE-520_SHP099_60min_R1 7 EKEESPQPR 9 1 F5H3K2;F5H8B7;E7ENF1;G5EA44;F5H7W8;Q96C57 F5H3K2 C12orf43 Uncharacterized protein C12orf43 1 EKEES(1)PQPR;EKEES(1)PQPR;EKEES(1)PQPR;EKEES(1)PQPR;EKEES(1)PQPR;EKEES(1)PQPR;EKEES(1)PQPR 108.56 0.0018873000000000002 5694710000.0 5317580.0 4808530.0 4770800.0 4478480.0 5115620.0 4611530.0 4642660.0 4688520.0 5553590.0 4835530.0 True False 5022603.237067077 4577521.001049327 5078333.401549895 4904113.3926958935 5518190.190103753 4582747.730709807 5111985.380795189 4672256.618428795 4545198.050611092 4792690.966185414 1.0479714366112476 0.9551045609545434 1.059599593919119 1.023248406228696 1.1513761744784008 0.9561951235836296 1.066621114706235 0.9748712469453303 0.9483603434228295 1.0 22.192404486972382 -7.325896034019528 8.538193034729433 0.9708447629399516 1.03558228566736 0.2183879892547499 0.054224170139150325 0.5965419838739774 73.98419493137091 0.029044332881327923 0.013902434970723247 4.721760622065385e-08 7.325896034019528 0.0647375227274084 EKEFNKGPWK ddPTM_KYSE-520_SHP099_60min_R1 1 EKEFNKGPWK 10 2 Q16531;F5H2L3;F5GY55 Q16531 DDB1 DNA damage-binding protein 1 0 81.525 0.0059006 1062200000.0 2650900.0 2540300.0 1961900.0 1383600.0 2509300.0 2542500.0 1505100.0 2038400.0 2357500.0 2058600.0 False True 2503849.292561864 2418260.1749319644 2088367.2131509862 1515096.9280054914 2706767.634036025 2526631.3144075135 1657250.1963604533 2031329.2661661368 1929437.4277387504 2040362.4055665664 1.2271590996436719 1.185211101877984 1.023527588752592 0.7425626564535629 1.3266112072303213 1.2383247738315 0.8122332541704861 0.9955727769852134 0.9456346688582441 1.0 20.9603939932258 -4.736861884744893 4.824084558583559 1.0125597290733273 1.213147972324675 0.18761120874827042 0.1636725729132531 0.32826769858603094 18.80481811965398 0.044812924308528644 0.11756788388596369 1.8328972315703078e-05 4.736861884744893 0.20058824325134772 EKEHNKEPDSSVSK ddPTM_KYSE-520_SHP099_60min_R1 1 EKEHNKEPDSSVSK 14 2 Q8WXA9;Q8WXA9-2 Q8WXA9 SREK1 Splicing regulatory glutamine/lysine-rich protein 1 0 111.74 0.00022932 682920000.0 710210.0 615640.0 549900.0 560070.0 718400.0 688580.0 466880.0 591190.0 652550.0 421940.0 False True 670813.2355314647 586063.7303055206 585347.4338711085 613298.8844088143 774933.9928631407 684282.3168042173 514076.7867096998 589139.2998747836 534063.3694468393 418201.9398643529 1.6040414249370727 1.4013893156392698 1.3996765152762574 1.4665137244646511 1.8530138648197005 1.636248547833541 1.229254907034732 1.4087435846564356 1.277046609635687 1.0 18.673840228440323 -7.885241059590042 0.8511401634128057 1.0111832138939723 1.537394049960308 0.549811460076626 0.15060467084311646 0.5043772228364722 0.8248277785738017 0.15773825053883725 0.057820282644530915 1.3024436431258316e-08 7.885241059590042 0.5262108360663358 EKEHQVVR ddPTM_KYSE-520_SHP099_60min_R1 4 EKEHQVVR 8 1 Q9H307 Q9H307 PNN Pinin 0 ;;; 116.05 0.00099694 1993670000.0 3897460.0 3258540.0 1536980.0 1606560.0 4322010.0 3337760.0 2253260.0 2573600.0 2237570.0 2443320.0 False True 3681260.1244061105 3101994.84723174 1636056.1900549515 1759246.9793701232 4662127.59812698 3316927.80176079 2481041.510498411 2564672.782282755 1831283.6925494797 2421674.0856741956 1.520130287631684 1.280929942465046 0.6755889240973038 0.7264590184852838 1.9251672327447154 1.3696838155813833 1.024515034940256 1.0590495217562474 0.7562056774620228 1.0 21.207573286288653 -6.931009578315228 5.413007793088487 0.9504694373799442 1.2315253650678948 0.1450640966625174 0.3467903184073592 0.4915580666125505 26.700348159653874 0.16336140423986653 0.10823683605100928 1.1721695131982237e-07 6.931009578315228 0.2810559276879506 EKEIS(ph)DDEAEEEK ddPTM_KYSE-520_SHP099_60min_R1 16 EKEISDDEAEEEK 13 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK;EKEIS(1)DDEAEEEK 274.08 4.5761e-34 45896770000.0 45652680.0 36084070.0 30852330.0 37045070.0 37248700.0 36136270.0 45361220.0 42271560.0 38239340.0 35116330.0 True False 43120234.83403862 34350537.113906674 32841120.55727338 40565822.31479362 40179960.77388818 35910730.13486128 49946774.80044504 42124929.82461625 31296039.79131604 34805226.63629137 1.2389011364482023 0.986936171192444 0.9435686456076681 1.165509500590227 1.1544231903375277 1.0317625714701484 1.4350366202863796 1.2103047127034834 0.8991764403189864 1.0 25.052800633390788 -5.311996528458725 24.984925291987846 1.146673617156253 1.0495150228952252 0.03367840792426291 0.1531657281513613 975.2356272148576 481951.21651855437 0.04382026497328962 0.06499597920218579 4.875323871873026e-06 5.311996528458725 -0.0971585942610278 EKEIS(ph)DDEAEEEKGEK ddPTM_KYSE-520_SHP099_60min_R1 14 EKEISDDEAEEEKGEK 16 2 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK;EKEIS(1)DDEAEEEKGEK 253.18 7.2341e-24 302239100000.0 37759210.0 29006960.0 25445530.0 31832280.0 29912370.0 29964010.0 37402580.0 32800070.0 31975750.0 27858550.0 True False 35664631.35018101 27613422.10126541 27085789.578087512 34857610.32047607 32266303.340895887 29776993.499004837 41183597.80040376 32686294.212763853 26169759.843061488 27611744.920623943 1.2916471397482074 1.0000607415665432 0.980951752812131 1.262419684836361 1.1685716869271572 1.0784176655479536 1.4915246363022368 1.1837822747793674 0.9477763871241112 1.0 24.71877872594361 -4.189400551423683 20.273572903593415 1.1408182607233919 1.2916671813317069 0.08440810463271564 0.15708494393234815 36934.15150592716 10388598.537506472 0.04028164955059094 136.4156391690989 6.465460288550605e-05 4.189400551423683 0.150848920608315 EKEKEDDEEEEDEDAS(ph)GGDQDQEER ddPTM_KYSE-520_SHP099_60min_R1 1 EKEKEDDEEEEDEDASGGDQDQEER 25 2 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 1 EKEKEDDEEEEDEDAS(1)GGDQDQEER 302.92 1.5583e-49 91536000.0 146070.0 129870.0 132420.0 130330.0 141370.0 132970.0 136780.0 147280.0 152460.0 123600.0 True False 137967.20591667405 123630.85026115569 140956.00507949115 142716.5240148568 152495.01471473038 132140.08490728293 150607.05724415858 146769.12005541046 124777.10720383878 122505.00015934481 1.126216935939082 1.0091902379522997 1.1506143006093361 1.1649852971651968 1.2448064529315288 1.078650542715853 1.229395184263996 1.19806636353214 1.0185470555613125 1.0 16.90248110985136 -4.791952500002873 24.67618300509271 1.1489678776569419 1.0677035921984055 0.07918138826618215 0.08325664482833399 292.7938671185982 236783.91965073912 0.02077545037516732 0.04325609870393452 1.6145351333744804e-05 4.791952500002873 -0.08126428545853637 EKEKEDDEEEEDEDASGGDQDQEER ddPTM_KYSE-520_SHP099_60min_R1 1 EKEKEDDEEEEDEDASGGDQDQEER 25 2 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 0 156.05 1.5061e-07 40865000.0 46985.0 48087.0 40033.0 26668.0 44898.0 47810.0 34893.0 42996.0 48616.0 45947.0 False True 44378.64838772463 45776.82833994149 42613.591235064756 29202.518701973426 48431.21716532476 47511.60005578098 38420.32496286319 42846.85691134183 39788.55990962763 45539.945326225075 0.9744993778498963 1.0052016534499437 0.9357409397354916 0.6412506315671086 1.0634886980734841 1.043295061411075 0.8436620792501938 0.9408631609987379 0.8737068001422171 1.0 15.474844938972353 -10.664406937798606 2.5546030878474473 1.0104309708439783 0.9246655129104409 0.0372339290380197 0.11497030192068297 84770056.74681792 68717910.7880566 5770900.583762184 0.029917496685663496 2.165673898071181e-11 10.664406937798606 -0.0857654579335374 EKEKEDDEEEEDEDASGGDQDQEERR ddPTM_KYSE-520_SHP099_60min_R1 1 EKEKEDDEEEEDEDASGGDQDQEERR 26 3 O60216;E5RI01;E5RFZ5 O60216 RAD21 Double-strand-break repair protein rad21 homolog 0 70.994 0.011745 25745000.0 9837.2 15116.0 8196.5 5965.7 10709.0 14219.0 6513.0 8749.0 12554.0 6809.4 False True 9291.510906027983 14389.80467042142 8724.85950486369 6532.678334346893 11551.73737412496 14130.253946729763 7171.397600754532 8718.651761031952 10274.510060586339 6749.074013633036 1.3767089955243133 2.132115404476853 1.2927491219150353 0.9679369823402401 1.7116033030295135 2.093658169726224 1.0625750415936184 1.2918293299822161 1.5223584805607364 1.0 12.72047385977659 -12.137710184590746 0.15303936403994386 2.70054887151551e-14 1.6824402275621 0.15190086015706605 0.36757572737549643 138.79904364682614 2.1329888300800466 46.77446634872334 2.0541342080652756 7.282656320179581e-13 12.137710184590746 1.682440227562073 EKELER ddPTM_KYSE-520_SHP099_60min_R1 1 EKELER 6 1 O15042-2;O15042;E7ET15;O15042-3;H7C4V2;E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3;G3V220;O14776-2;O14776 O15042-2;E7EPN9;G3V220 U2SURP;PRRC2C;TCERG1 U2 snRNP-associated SURP motif-containing protein;Protein PRRC2C;Transcription elongation regulator 1 0 86.086 0.018353 1193600000.0 1610200.0 1646900.0 659250.0 679480.0 2005600.0 2506900.0 1138800.0 1217600.0 1086900.0 3173200.0 False True 1520878.99614588 1567780.4519527028 701746.3098372942 744057.5749068895 2163429.309696987 2491253.5072126626 1253921.0176169612 1213376.429789977 889546.3585193006 3145087.916712243 0.48357280827168414 0.498485413912245 0.22312454482063362 0.236577671152894 0.6878756228724298 0.7921093378581688 0.39869188106123377 0.3858004805978191 0.28283672255788606 1.0 21.584668915596296 -5.760913446588981 24.999999895221528 0.560927186567446 0.36049224202927427 0.2082318301316064 0.21565846780646616 27.76071111939569 1319545.819627682 0.06787788095542009 0.08238244419942828 1.7341495734203663e-06 5.760913446588981 -0.20043494453817173 EKELETGPK ddPTM_KYSE-520_SHP099_60min_R1 1 EKELETGPK 9 1 Q14247-3;Q14247;Q14247-2 Q14247-3 CTTN Src substrate cortactin 0 87.29799999999999 0.020575 0.0 210050.0 161220.0 131580.0 140810.0 161680.0 200150.0 133080.0 158360.0 188510.0 177330.0 False True 198398.107775706 153474.7492038463 140061.85733544375 154192.54006392977 174403.29616663774 198900.78960812712 146533.02513563845 157810.68612150167 154281.33595038496 175758.9941606525 1.1288077103716252 0.8732113536309993 0.7968972399069387 0.8772953031523956 0.992286608144926 1.1316677735781866 0.8337156561199932 0.8978811404510816 0.877800517049865 1.0 17.423238993031674 -11.693712882446684 2.1188916019040773 3.055824992941297 0.9303425043618925 0.029919986584207803 0.10990638690713596 3605400.422676257 557268.6027894871 36873887.58093971 0.02837402677076552 2.024357064341504e-12 11.693712882446684 -2.1254824885794044 EKELS(ph)PPPGLPSK ddPTM_KYSE-520_SHP099_60min_R1 7 EKELSPPPGLPSK 13 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YIM6;H0YHT2;H0YI78 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 EKELS(1)PPPGLPSK;EKELS(1)PPPGLPSK;EKELS(1)PPPGLPSK;EKELS(1)PPPGLPSK;EKELS(1)PPPGLPSK;EKELS(1)PPPGLPSK;EKELS(1)PPPGLPSK 115.98 8.3186e-05 26313790000.0 10750480.0 10021670.0 9201120.0 8010440.0 8773230.0 9329160.0 8678100.0 10058420.0 11303720.0 9897270.0 True False 10154129.443849435 9540213.930366658 9794238.917512516 8771749.8091734 9463633.288149616 9270933.251963805 9555367.03809425 10023529.68867288 9251249.391592402 9809587.887759538 1.0351229389075374 0.9725397274100569 0.9984353093705215 0.8942016636722161 0.9647330139075866 0.9450889637812543 0.9740844516024464 1.0218094585992037 0.9430823697635826 1.0 23.225761097738683 -7.0105906784725605 24.317740001972194 0.9890569396246113 0.9658103316289468 0.0486488588104067 0.038442668529999766 1099.4215629799126 2524430.8504190934 0.017196161346317344 0.010778086879779108 9.759089963357124e-08 7.0105906784725605 -0.02324660799566447 EKENGFS(ph)SPPQIK ddPTM_KYSE-520_SHP099_60min_R1 1 EKENGFSSPPQIK 13 1 P11387 P11387 TOP1 DNA topoisomerase 1 1 EKENGFS(0.577)S(0.423)PPQIK 81.317 0.0054221 585910000.0 648260.0 632560.0 508260.0 617220.0 541780.0 611270.0 680510.0 689560.0 623240.0 630590.0 True False 612299.7255257278 602170.8681080824 541023.2528447532 675880.4032260396 584415.0036934754 607454.837190907 749302.591937581 687168.0773045144 510075.3266018663 625003.463191596 0.9796741323624094 0.9634680502938043 0.8656324079901963 1.081402652994336 0.9350588246489794 0.9719223539801259 1.1988775039921353 1.0994628314465222 0.816116000377268 1.0 19.253504658316334 -6.562691092639043 24.999734348785264 1.043830821882114 0.9646591794887435 0.07430103860665993 0.10268785892966004 355.21891578971963 223053.1414129887 0.03939055818009359 0.03051182753717699 2.7372149753351055e-07 6.562691092639043 -0.07917164239337049 EKENGFS(ph)SPPQIKDEPEDDGYFVPPK ddPTM_KYSE-520_SHP099_60min_R1 4 EKENGFSSPPQIKDEPEDDGYFVPPK 26 2 P11387 P11387 TOP1 DNA topoisomerase 1 1 EKENGFS(0.582)S(0.418)PPQIKDEPEDDGYFVPPK;EKENGFS(0.5)S(0.5)PPQIKDEPEDDGY(0.001)FVPPK;EKENGFS(0.607)S(0.393)PPQIKDEPEDDGYFVPPK;EKENGFS(0.572)S(0.428)PPQIKDEPEDDGYFVPPK 207.9 1.4754e-21 3470480000.0 1918920.0 1876100.0 1588420.0 1779690.0 1630520.0 1763400.0 1966720.0 2070500.0 2118400.0 1987950.0 True False 1812473.6823278184 1785969.3399164905 1690812.0947618578 1948831.202516691 1758832.6476102583 1752393.9664999829 2165535.2509375033 2063317.9187583341 1733751.9605182474 1970338.3096016988 0.9198794306010359 0.9064277597472699 0.8581328833339555 0.9890845612754922 0.8926551542134934 0.8893873493502884 1.0990677288182369 1.0471896672279752 0.8799260269515458 1.0 20.910011932853788 -6.732791666652564 24.99997884921462 1.0104784089350838 0.9096818696075744 0.38536292719865706 0.060106550334555156 216.45398896903814 188892.50509821594 0.023027887200728146 0.017833982997300844 1.8501559356703138e-07 6.732791666652564 -0.10079653932750943 EKENGFSS(ph)PPQIK ddPTM_KYSE-520_SHP099_60min_R1 2 EKENGFSSPPQIK 13 1 P11387 P11387 TOP1 DNA topoisomerase 1 1 EKENGFS(0.054)S(0.946)PPQIK;EKENGFS(0.164)S(0.836)PPQIK 75.143 0.010824 2208450000.0 3219600.0 2769400.0 2097610.0 2457700.0 2354000.0 2737300.0 3073200.0 3092100.0 2662900.0 2975900.0 True False 3041002.3698865213 2636353.8670458524 2232825.2968946644 2691279.0690655513 2539246.4075721516 2720215.49535012 3383869.0475416593 3081374.2268015677 2179384.4862462445 2949535.8412151667 1.0310104821895203 0.8938199123424492 0.757009040437621 0.9124415548572492 0.8608969493064436 0.922252056523385 1.1472547647183542 1.0446980110375894 0.7388906606228488 1.0 21.492056509471944 -6.534390884563271 24.986331922859815 0.9933382234344196 0.8855976464608756 0.12240037195115272 0.11410272514693694 428.5618261009833 930156.4277617162 0.044287536755720364 0.034332124160807914 2.921521693253425e-07 6.534390884563271 -0.107740576973544 EKENGFSS(ph)PPQIKDEPEDDGYFVPPK ddPTM_KYSE-520_SHP099_60min_R1 1 EKENGFSSPPQIKDEPEDDGYFVPPK 26 2 P11387 P11387 TOP1 DNA topoisomerase 1 1 EKENGFS(0.119)S(0.881)PPQIKDEPEDDGYFVPPK 193.47 1.4780999999999999e-15 1005700000.0 898820.0 808450.0 644270.0 727760.0 764960.0 782840.0 857310.0 765650.0 885110.0 885540.0 True False 848960.662846752 769610.8484918106 685800.6750684478 796926.0915909772 825157.9999729792 777954.0051802458 943975.2613393016 762994.138854053 724396.3358073588 877694.8045396955 0.9672618072428798 0.8768547386986423 0.7813657680566014 0.9079763118900114 0.9401422860258708 0.886360499294788 1.0755165194744052 0.8693160024505364 0.8253396648363054 1.0 19.74335984185084 -5.513428233652955 23.882862832907698 0.9304244025611053 0.8702203194780009 0.09848597968324779 0.07749953988980228 597.145309036752 1509075.9488090745 0.02295176133856986 0.031438140418268326 3.065997287857045e-06 5.513428233652955 -0.06020408308310432 EKENQINS(ph)FGK ddPTM_KYSE-520_SHP099_60min_R1 2 EKENQINSFGK 11 1 F5H5B4;Q13043-2;Q13043 F5H5B4 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit 1 EKENQINS(1)FGK;EKENQINS(1)FGK 128.74 0.00010580000000000001 1024410000.0 1134410.0 1014370.0 1001690.0 971570.0 953540.0 942150.0 808410.0 838990.0 988630.0 980880.0 True False 1071482.0159097305 965638.1425995894 1066260.5401606674 1063907.7206868292 1028578.1730995543 936269.6923772015 890131.9721212924 836079.7395117371 809119.7133341931 972190.1663130932 1.102132127064388 0.9932605533973343 1.0967612892077732 1.0943411665246143 1.0580010050917357 0.9630520085672997 0.9155945029736353 0.8599960876815517 0.8322648606935371 1.0 19.890879015801442 -6.484813134095142 2.0089825942459125 0.8871712020382976 1.0695526927249706 0.7124225267286206 0.05019527899012366 0.17064753204852828 1.3759488313886064 0.021719535594094952 0.017074778797626047 3.274815715864124e-07 6.484813134095142 0.18238149068667298 EKENSS(ph)S(ph)KS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 EKENSSSKSK 10 2 O15014;E7ERY8;O15014-2 O15014 ZNF609 Zinc finger protein 609 3 EKENS(0.639)S(0.682)S(0.682)KS(0.997)K 43.628 0.061453 0.0 163670.0 164890.0 102460.0 109110.0 105300.0 132080.0 104950.0 142660.0 165590.0 171480.0 True False 154590.89883194392 156968.43689506414 109064.73554179636 119479.78159488246 113586.5109249565 131255.63972741162 115559.37021329456 142165.1457570944 135523.0301842035 169960.82060942112 0.9095678538008587 0.9235565957626543 0.6417051597581589 0.7029842593514729 0.668309970013526 0.7722699811449132 0.6799176998495203 0.8364583393239632 0.7973780645343113 1.0 17.374842688876598 -8.351781617466193 1.229834864969908 0.9992584586477761 0.7568102423698476 0.3625240638149121 0.09281873186488734 1.4696772914054763 3.589422889608097 0.0957449960266294 0.029131088667527238 4.448549040197873e-09 8.351781617466193 -0.24244821627792845 EKEPEKLDK ddPTM_KYSE-520_SHP099_60min_R1 1 EKEPEKLDK 9 2 Q13435;E9PPJ0 Q13435 SF3B2 Splicing factor 3B subunit 2 0 74.16199999999999 0.012119 738150000.0 1117400.0 923620.0 725650.0 727340.0 1134400.0 1027400.0 698140.0 965700.0 880890.0 781500.0 False True 1055415.5945183241 879247.9088181158 772426.5600810514 796466.1749172556 1223670.8261469183 1020987.6155053211 768714.8043898002 962350.2120960735 720942.5814298155 774576.5179977992 1.3625711211159164 1.1351337000131134 0.9972243440553746 1.0282601607598936 1.5797933421864916 1.3181236350211976 0.9924323633988402 1.2424211033193338 0.9307570842624794 1.0 19.563048239834014 -7.636687303748879 1.535333156619703 0.9695155814913291 1.210661429494528 0.1976333425629091 0.17909184447042562 0.7244553501506521 3.1552114532168845 0.17574825033400493 0.055315786749970224 2.3084086672010034e-08 7.636687303748879 0.24114584800319883 EKEPGEQASVPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 11 EKEPGEQASVPLSPK 15 1 P42858 P42858 HTT Huntingtin 1 EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK;EKEPGEQAS(0.003)VPLS(0.997)PK;EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK;EKEPGEQASVPLS(1)PK 247.79 8.0987e-19 31219190000.0 29981150.0 27916880.0 23497860.0 23304460.0 25550560.0 25703250.0 24636550.0 24294350.0 28818750.0 24655740.0 True False 28318035.84355918 26575711.180708848 25012569.65350533 25519308.871658612 27561243.709199972 25542826.48261352 27127052.903557364 24210078.57019393 23585991.46156784 24437309.325475458 1.158803347226044 1.0875056180184348 1.023540248247796 1.0442765417326525 1.127834629505134 1.0452389067230727 1.1100670921768747 0.9907014822190493 0.9651631915539846 1.0 24.542582109904604 -7.307120806144085 7.84220062142986 0.9828686684011214 1.0815187285170713 0.5710939323340256 0.039619558550743166 0.24042376172626145 37.20039731198159 0.022146634855438534 0.010644343440284788 4.930366386385176e-08 7.307120806144085 0.0986500601159499 EKEPS(ph)RER ddPTM_KYSE-520_SHP099_60min_R1 2 EKEPSRER 8 2 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 EKEPS(1)RER;EKEPS(1)RER 65.179 0.021721 2349180000.0 903660.0 822800.0 664870.0 764510.0 938080.0 940680.0 807160.0 821560.0 962180.0 994490.0 True False 853532.1783984518 783271.4529520213 707728.5840296127 837168.8005416878 1011901.5590549201 934808.8671924717 888755.609922466 818710.2001135458 787472.3665839544 985679.5923015111 0.8659326875232327 0.7946511818542603 0.7180107912928408 0.8493315749664064 1.026602931579604 0.9483902015357153 0.9016678613049778 0.830604799478398 0.7989131282968404 1.0 19.910759230857693 -5.524408291983316 24.998194005641217 0.9125061020643586 0.7914814509225037 0.3754327186617247 0.07255381688490622 57.37588546782645 937710.749181777 0.022869193686233337 0.02975324648071528 2.9894528496548796e-06 5.524408291983316 -0.1210246511418549 EKEQFR ddPTM_KYSE-520_SHP099_60min_R1 8 EKEQFR 6 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;;;;; 138.62 0.0076048 68487100000.0 23660500.0 20245210.0 15148180.0 13696790.0 23095050.0 20893910.0 18220840.0 20020440.0 17884650.0 18364630.0 False True 22348004.89896259 19272599.722920258 16124655.920744976 14998528.803509941 24912499.04214069 20763503.357487608 20062780.325461697 19950993.76644582 14637248.395337379 18201933.665665958 1.227781910947039 1.0588215558259 0.885875985316916 0.8240074422313409 1.3686732135021882 1.1407306354848168 1.1022334601353825 1.0960919940104543 0.8041589791609562 1.0 24.11758838615648 -7.743607568174721 24.793237527806347 0.9020794934673577 1.0830997307487336 0.19190896966377324 0.15235934519046507 340.22107985264216 473045.44328967476 0.1092856600506173 0.04110930410862766 1.804647697830889e-08 7.743607568174721 0.18102023728137584 EKEQFRK ddPTM_KYSE-520_SHP099_60min_R1 2 EKEQFRK 7 2 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ; 85.212 0.0056886 2931900000.0 5938300.0 6255700.0 3636000.0 2752900.0 6002800.0 5632300.0 3238600.0 3916500.0 5453600.0 3672600.0 False True 5608890.661292439 5955166.782002859 3870382.377805691 3014534.7883104337 6475186.208740069 5597146.726504394 3565989.2936901045 3902914.575617973 4463363.714068316 3640063.6212395667 1.5408770958191162 1.6360062355104992 1.063273277758726 0.8281544231042536 1.7788662184247883 1.537650796498544 0.9796502656939173 1.0722105385314382 1.2261773909732894 1.0 21.79553223547471 -1.0000000000036398 0.1300381144724596 0.9347258492942636 2.814246702348558 0.1839090557891817 0.2819328733027227 167.4928998172212 1.477048160072877 1.6625522669843333 57.726296755546706 0.09999999999916191 1.0000000000036398 1.8795208530542942 EKERAS(ph)LDK ddPTM_KYSE-520_SHP099_60min_R1 1 EKERASLDK 9 2 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 EKERAS(1)LDK 73.156 0.014763 957040000.0 1941200.0 2060800.0 2196300.0 1508100.0 1666000.0 1439500.0 1358500.0 1497500.0 2336000.0 1584400.0 True False 1833517.7663137366 1961796.0746761356 2337877.012204251 1651429.3705732017 1797104.7217566718 1430515.546544588 1495830.4376823315 1492305.5220191285 1911841.2857678581 1570363.4486445491 1.1675754220440673 1.2492624407231647 1.4887489989799347 1.0516223948020595 1.1443877678812717 0.9109455188729271 0.95253773193298 0.9502930823480412 1.2174514679503359 1.0 20.58266706785161 -5.399078083196585 7.5651344785627375 1.0242598034079486 1.296041282166834 0.536526436391888 0.11477133129023742 0.20866030647215472 11.96120101653168 0.033086967698835755 0.049151305042113944 3.989531668452555e-06 5.399078083196585 0.27178147875888525 EKETLAVNYEKEEEFLTNELSR ddPTM_KYSE-520_SHP099_60min_R1 2 EKETLAVNYEKEEEFLTNELSR 22 2 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 0 ; 234.39 5.656800000000001e-27 322670000.0 469531.0 436236.0 296183.0 395249.0 480999.0 390073.0 332023.0 409390.0 378720.0 305906.0 False True 443485.1794431571 415278.5677564144 315275.43008955574 432813.34612405475 518850.88479005767 387638.40971676743 365587.1250722129 407969.92164234386 309953.99475428194 303195.9108312665 1.46270171727337 1.3696707406701265 1.0398406404135565 1.4275039031279102 1.7112726994487955 1.2785080400787285 1.2057785478369072 1.3455653822105333 1.0222894956085884 1.0 18.209890770613246 -7.769414170402913 5.228276296841004 1.0006180939306772 1.3529774026523562 0.41093647864045335 0.16480398850517436 0.18290309694871754 14.23496866410042 0.15165418946406362 0.04474360084075092 1.7005359972805784e-08 7.769414170402913 0.352359308721679 EKEVDGLLTSEPMGS(ph)PVSSK ddPTM_KYSE-520_SHP099_60min_R1 34 EKEVDGLLTSEPMGSPVSSK 20 1 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EKEVDGLLTSEPMGS(0.999)PVS(0.001)SK;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(0.995)PVS(0.004)S(0.001)K;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(0.975)PVS(0.019)S(0.006)K;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(0.999)PVS(0.001)SK;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(0.998)PVS(0.002)SK;EKEVDGLLT(0.001)S(0.017)EPMGS(0.982)PVSSK;EKEVDGLLT(0.001)S(0.006)EPMGS(0.986)PVS(0.005)S(0.001)K;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(0.996)PVS(0.004)S(0.001)K;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(0.997)PVS(0.002)S(0.001)K;EKEVDGLLTSEPMGS(0.967)PVS(0.027)S(0.006)K;EKEVDGLLTSEPMGS(0.986)PVS(0.011)S(0.003)K;EKEVDGLLTSEPMGS(0.889)PVS(0.089)S(0.023)K;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(0.996)PVS(0.003)S(0.001)K;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(0.994)PVS(0.005)S(0.001)K;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLT(0.001)S(0.099)EPMGS(0.901)PVSSK;EKEVDGLLTSEPMGS(0.999)PVS(0.001)SK;EKEVDGLLTSEPMGS(1)PVSSK;EKEVDGLLTSEPMGS(0.998)PVS(0.002)S(0.001)K;EKEVDGLLTS(0.005)EPMGS(0.995)PVSSK;EKEVDGLLTSEPMGS(0.987)PVS(0.01)S(0.003)K 240.18 1.9493e-26 204593880000.0 70178110.0 63686360.0 61667980.0 58145980.0 58901470.0 61191630.0 57493580.0 61459710.0 76123150.0 60274190.0 True False 66285190.34170608 60626771.6704247 65643196.66305667 63672156.45697367 63536680.58547959 60809710.33928733 63305592.1496682 61246520.61081415 62301104.86845021 59740207.56921017 1.109557415998487 1.014840325089052 1.0988109906884367 1.0658174627734305 1.0635497125093034 1.0179025620029545 1.0596814896621753 1.0252143924987016 1.042867231357929 1.0 25.83219891455776 -1.0000000002180272 0.04353478143146654 0.8695412467701861 1.3584852319064993 0.41934998167736526 0.026273624785623374 646.7280874834719 2.142494402043576 6.252869606107298 22.47622113871013 0.0999999999497974 1.0000000002180272 0.4889439851363132 EKFEEMIQQIK ddPTM_KYSE-520_SHP099_60min_R1 3 EKFEEMIQQIK 11 1 B7ZAR1;E9PCA1;P48643;E7ENZ3;P48643-2 B7ZAR1 CCT5 T-complex protein 1 subunit epsilon 0 ;; 138.94 0.00011027 2390833000.0 2961530.0 2705170.0 1889722.0 1688091.0 3006820.0 2679670.0 1928870.0 2070360.0 2023270.0 2199300.0 False True 2797248.027236309 2575209.5726570473 2011536.5037821042 1848526.6610969356 3243439.627534447 2662945.1855568835 2123859.0035570986 2063178.404385659 1655895.1704861016 2179815.913029506 1.2832496590726767 1.1813885554574302 0.9228010914859653 0.8480196194768829 1.4879419900310378 1.2216376482250397 0.974329525196172 0.9464920372648604 0.7596490880666801 1.0 21.0557748728707 -6.931566346461308 4.273515020043709 0.9002109675909741 1.1481943755177548 0.30545144827606496 0.17709709207191263 0.30390903838176464 10.921822022888437 0.08499445710452792 0.05500065846695486 1.170667747652046e-07 6.931566346461308 0.24798340792678075 EKFEGVELNTDEPPMVFK ddPTM_KYSE-520_SHP099_60min_R1 1 EKFEGVELNTDEPPMVFK 18 1 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 0 152.71 2.5852999999999996e-06 98825000.0 76744.0 84805.0 51549.0 58694.0 71532.0 69434.0 57317.0 54873.0 64786.0 62747.0 False True 72486.85733462885 80730.84050509984 54871.93102131624 64272.260113005395 77161.16143859443 69000.63665076545 63111.16172001339 54682.65837045446 53022.495522156016 62191.11039642732 1.1655501384775562 1.298109006102222 0.8823114858625913 1.0334637812914438 1.2407104640316422 1.109493562840925 1.0147939362671183 0.879268082236972 0.8525735460288869 1.0 15.924420755668212 -6.994723872113424 2.8660392580951277 0.9007673168739103 1.1200773209799846 0.41659283924169754 0.11200253731127864 0.2771410788274556 4.603995029840688 0.06023513839885743 0.034662529924945805 1.0122228290341527e-07 6.994723872113424 0.21931000410607426 EKFEVK ddPTM_KYSE-520_SHP099_60min_R1 1 EKFEVK 6 1 P33316-2;A0A0C4DGL3;H0YNW5;P33316;H0YKC5;H0YMP1 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 0 68.422 0.048213 859750000.0 790310.0 1038800.0 530470.0 758860.0 1404000.0 1448600.0 1144200.0 1326400.0 1245800.0 1343900.0 False True 746469.9288560735 988894.4887294107 564664.94498201 830981.8262404216 1514486.812332751 1439558.750069112 1259866.9023158825 1321799.0279840878 1019594.1240623277 1331994.091538378 0.5604153453818574 0.7424165730249549 0.4239245118045936 0.6238629972304791 1.137007154876794 1.0807546063560258 0.9458502183450433 0.9923460144312536 0.7654644495342723 1.0 20.345156252238464 -5.69461290756988 7.360723050984678 0.9886795306036751 0.5836420345089232 0.7399839194070565 0.11601406385141859 0.11982299455884125 11.080271049580196 0.035074928818047336 0.04520107916773783 2.0201661623565035e-06 5.69461290756988 -0.4050374960947519 EKFPEFCSSPS(ph)PPVEVK ddPTM_KYSE-520_SHP099_60min_R1 9 EKFPEFCSSPSPPVEVK 17 1 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 EKFPEFCSSPS(1)PPVEVK;EKFPEFCSSPS(1)PPVEVK;EKFPEFCSS(0.001)PS(0.999)PPVEVK;EKFPEFCS(0.015)S(0.071)PS(0.914)PPVEVK;EKFPEFCS(0.001)S(0.011)PS(0.988)PPVEVK;EKFPEFCS(0.008)S(0.094)PS(0.898)PPVEVK;EKFPEFCS(0.005)S(0.161)PS(0.834)PPVEVK;EKFPEFCSS(0.002)PS(0.998)PPVEVK;EKFPEFCS(0.001)S(0.009)PS(0.99)PPVEVK 147.08 9.3985e-07 28659620000.0 7285920.0 6837790.0 6243720.0 5723220.0 5959860.0 6258210.0 5983890.0 6264020.0 7583640.0 6182350.0 True False 6881755.493478565 6509292.304667969 6646200.181505215 6267153.108051166 6428867.075035236 6219150.190024874 6588799.998338559 6242291.5766532635 6206642.144007086 6127579.188795518 1.123078997667151 1.062294277089136 1.0846371750948585 1.0227779870247722 1.0491691542380444 1.0149440747166183 1.075269661204281 1.0187206699943594 1.0129028043172639 1.0 22.546885792976774 -1.0000000000000002 0.3313871028633453 1.0180871210082472 2.0309720727043374 0.6596502348837436 0.021847455911777787 36.784692133823754 0.5239183327499204 0.019261941065596234 22.851072980673646 0.09999999999999995 1.0000000000000002 1.0128849516960903 EKFS(ph)FEPK ddPTM_KYSE-520_SHP099_60min_R1 3 EKFSFEPK 8 1 P23443-3;P23443-5;P23443-2;P23443;K7ERJ3;P23443-4 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 EKFS(1)FEPK;EKFS(1)FEPK;EKFS(1)FEPK 85.845 0.0033604999999999998 3078400000.0 5499000.0 5353800.0 5005900.0 5271100.0 6000100.0 5836000.0 5560000.0 5941500.0 7121900.0 6016000.0 True False 5193959.508015268 5096595.411782361 5328588.323723187 5772063.759186003 6472273.734100955 5799575.359245711 6122059.060370821 5920890.3232565215 5828742.488488912 5962702.920377176 0.871074674920534 0.854745822463342 0.8936531628153163 0.9680280631557754 1.085459701837962 0.9726420109621785 1.0267254871023432 0.9929876437449595 0.9775336062055913 1.0 22.507535028511988 -5.285615239966781 2.9398335412848757 1.0089043930889632 0.866111026038887 0.7954933176938856 0.030876265365033163 0.10860971659506585 1.8888787548982005 0.008864193069521254 0.015278288365275165 5.180656051469155e-06 5.285615239966781 -0.14279336705007617 EKFS(ph)S(ph)LLNMS(ph)DNIT(ph)QHDDRVTGLSLFK ddPTM_KYSE-520_SHP099_60min_R1 1 EKFSSLLNMSDNITQHDDRVTGLSLFK 27 2 F8WDM8;Q17RW2-2;Q17RW2 F8WDM8 COL24A1 Collagen alpha-1(XXIV) chain 4 EKFS(0.969)S(0.971)LLNMS(0.727)DNIT(0.767)QHDDRVT(0.558)GLS(0.007)LFK 52.276 0.051095 986370000.0 333150.0 371800.0 340760.0 801410.0 343700.0 271760.0 304470.0 302660.0 365290.0 238660.0 True False 314669.5053819398 353938.16991682205 362725.93483527773 877575.765447297 370747.23461450683 270063.84503574617 335248.79894084623 301610.1431013749 298962.54421153286 236545.65807467038 1.3302696314240021 1.4962784470349244 1.5334288432416545 3.709963533426061 1.5673389976047374 1.1416985931337411 1.4172688759944105 1.275060999032016 1.2638682385671156 1.0 17.85175915407045 -5.992760038183934 24.996515475407048 1.260836339711851 2.03230177189322 0.2624073741079894 0.6285304596153809 270.9207190241548 935366.0058123621 0.20594038491319833 0.2330393496940131 1.0168103584571162e-06 5.992760038183934 0.771465432181369 EKGGRS(ph)PDEVTLTSIVPTR ddPTM_KYSE-520_SHP099_60min_R1 2 EKGGRSPDEVTLTSIVPTR 19 2 A0A0C4DGG1;Q9UKS6;H0YDM6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 EKGGRS(1)PDEVTLTSIVPTR;EKGGRS(0.991)PDEVT(0.009)LTSIVPTR 244.78 1.9091000000000002e-26 2008170000.0 1533260.0 1654900.0 1561090.0 1420490.0 1481700.0 1409760.0 1217650.0 1249240.0 1974960.0 1334900.0 True False 1448207.0113219656 1575396.119944456 1661720.3592323135 1555492.942514108 1598301.3602802285 1400961.164916081 1340741.9451188005 1244906.678014809 1616357.0486901044 1323073.8245364858 1.094577630110185 1.1907091582711695 1.2559543756482872 1.1756660238207388 1.2080212990686015 1.0588684765242646 1.0133538433416627 0.9409200415940047 1.2216680722682765 1.0 20.33546213231735 -6.317046805445864 5.1842775515021495 1.0393938495501478 1.1887935420573874 0.44454985767250377 0.0769957707480479 0.19218475316449976 11.297503776269577 0.02692110920963681 0.02390741998372853 4.818958592124399e-07 6.317046805445864 0.1493996925072396 EKGHWEVR ddPTM_KYSE-520_SHP099_60min_R1 2 EKGHWEVR 8 1 D6RC18;H0YA89;A8MVI5;Q9ULR0;Q9ULR0-2;Q9ULR0-1 D6RC18 ISY1 Pre-mRNA-splicing factor ISY1 homolog 0 ; 116.3 0.00099339 398510000.0 1015030.0 938450.0 813180.0 711360.0 1116820.0 966520.0 805640.0 864450.0 907760.0 646240.0 False True 958724.2624878604 893365.4533578318 865598.883934003 778967.4405218179 1204707.3801634356 960487.5901676107 887081.9534886956 861451.4247141458 742933.6667673931 640514.8163671114 1.4968026312421274 1.3947615738615466 1.3514111802183268 1.2161583473431352 1.880842330855555 1.4995556162390267 1.3849514965478396 1.344935983838982 1.1599008294315245 1.0 19.28887241776271 -7.7937233646356905 1.4573272329721307 1.0027352275161652 1.4652383703735448 0.4825748659961143 0.16088674866224115 0.3524102147393712 1.5391762369341533 0.1595344018057338 0.04885863916087112 1.60796516284199e-08 7.7937233646356905 0.4625031428573796 EKGPTTGEGALDLSDVHS(ph)PPKS(ph)PEGK ddPTM_KYSE-520_SHP099_60min_R1 8 EKGPTTGEGALDLSDVHSPPKSPEGK 26 2 O95684;O95684-2 O95684 FGFR1OP FGFR1 oncogene partner 2 EKGPTTGEGALDLS(0.121)DVHS(0.916)PPKS(0.963)PEGK;EKGPTTGEGALDLSDVHS(1)PPKS(1)PEGK;EKGPTTGEGALDLS(0.003)DVHS(0.997)PPKS(1)PEGK;EKGPTTGEGALDLS(0.001)DVHS(0.999)PPKS(1)PEGK;EKGPTTGEGALDLS(0.012)DVHS(0.988)PPKS(1)PEGK;EKGPTTGEGALDLSDVHS(1)PPKS(1)PEGK;EKGPTTGEGALDLSDVHS(1)PPKS(1)PEGK;EKGPTTGEGALDLSDVHS(1)PPKS(1)PEGK 143.64 9.142399999999999e-07 19529300000.0 5472500.0 5997100.0 4998710.0 6993240.0 5617570.0 5532290.0 5205730.0 5161800.0 6522360.0 5208030.0 True False 5168929.515841717 5708990.314169378 5320934.84481879 7657875.427005724 6059640.799398936 5497760.926011222 5731975.991428815 5143894.920573171 5338063.8393154275 5161890.905986024 1.0013635719901655 1.1059881772295703 1.0308111778666864 1.4835407346802338 1.173918804128896 1.0650672449577934 1.1104411340390181 0.9965136835046274 1.0341295344163712 1.0 22.299468220431354 -6.850175636053303 1.6369538253104423 1.0135838191291584 1.1605483753928558 0.1858969846743327 0.12550953091748004 0.698454478390915 3.7777463342420785 0.0791615390549146 0.04450208874836977 1.411966405982578e-07 6.850175636053303 0.14696455626369742 EKGPTTGEGALDLSDVHS(ph)PPKSPEGK ddPTM_KYSE-520_SHP099_60min_R1 1 EKGPTTGEGALDLSDVHSPPKSPEGK 26 2 O95684;O95684-2 O95684 FGFR1OP FGFR1 oncogene partner 1 EKGPTTGEGALDLSDVHS(1)PPKSPEGK 186.01 2.2518e-15 797140000.0 621300.0 594860.0 614850.0 794090.0 616870.0 638760.0 573180.0 527440.0 759890.0 618580.0 True False 586835.2504691556 566282.0326969363 654484.2147947827 869560.074848136 665414.1594898182 634773.2619040081 631122.6280977244 525610.4337454216 621913.1312680377 613099.8624479583 0.9571609560081542 0.9236375138560791 1.067500182077332 1.4183008806692512 1.0853275302215557 1.0353505208262699 1.0293961338986533 0.8572998722374316 1.014374931980722 1.0 19.22576255540763 -6.786537628834408 2.2406258647555246 0.9531248549006278 1.0940345357591945 0.14846148740249165 0.13117930324551583 0.6052613855423427 6.210862180284602 0.07121347625964024 0.04565628052494223 1.6347915007836518e-07 6.786537628834408 0.1409096808585667 EKGS(ph)FSDTGLGDGK ddPTM_KYSE-520_SHP099_60min_R1 3 EKGSFSDTGLGDGK 14 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 EKGS(0.847)FS(0.153)DTGLGDGK;EKGS(0.997)FS(0.003)DTGLGDGK;EKGS(0.901)FS(0.081)DT(0.018)GLGDGK 150.98 1.6331999999999999e-06 1174470000.0 1875810.0 1402640.0 1328160.0 1415140.0 1488910.0 1570040.0 1433670.0 1536020.0 1958920.0 1606610.0 True False 1771755.0799654715 1335255.0689944366 1413775.318731136 1549634.4801226454 1606078.7462609396 1560240.797983231 1578599.3548708332 1530691.9051297633 1603229.508354611 1592376.6853236663 1.1126482171555687 0.8385296527517501 0.887839750331293 0.973158232222966 1.0086047862064045 0.9798189161919918 0.9913479451314419 0.9612624445192973 1.006815487271932 1.0 20.602750222898123 -5.506038385235201 22.87761939855929 0.9889882385964917 0.9347150237928913 0.0746947853856057 0.06692636336918333 520.8877168856079 707624.1325975097 0.01855093278612021 0.026691247054842614 3.1186139323767618e-06 5.506038385235201 -0.05427321480360037 EKGS(ph)TLDLSDLEAEK ddPTM_KYSE-520_SHP099_60min_R1 1 EKGSTLDLSDLEAEK 15 1 O00767 O00767 SCD Acyl-CoA desaturase 1 EKGS(0.71)T(0.29)LDLSDLEAEK 167.51 2.5108000000000002e-08 451380000.0 222970.0 207120.0 180560.0 249320.0 222430.0 286820.0 197380.0 302900.0 335310.0 169960.0 True False 210601.40962032485 197169.64430654177 192199.18650621473 273015.2978392086 239933.97554642035 285029.84998952324 217333.09664316432 301849.31059739157 274426.15647723497 168454.28662687895 1.2501991717598762 1.1704637991389704 1.1409575283289168 1.6207085216176724 1.4243269218661483 1.6920308511997415 1.290160677979958 1.791876696293152 1.6290838421053686 1.0 17.36199761537291 -5.255853986080966 24.896607010579082 1.5226232389517385 1.1855325082102828 0.28940298013091126 0.21572732883656054 477.8219446467659 2129859.3955355305 0.055411434125604765 0.09262512204868933 5.5481221472683725e-06 5.255853986080966 -0.3370907307414557 EKGSFS(ph)DTGLGDGK ddPTM_KYSE-520_SHP099_60min_R1 7 EKGSFSDTGLGDGK 14 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 EKGS(0.001)FS(0.782)DT(0.217)GLGDGK;EKGS(0.085)FS(0.656)DT(0.259)GLGDGK;EKGS(0.001)FS(0.998)DTGLGDGK;EKGS(0.013)FS(0.987)DTGLGDGK;EKGS(0.004)FS(0.996)DT(0.001)GLGDGK;EKGS(0.002)FS(0.994)DT(0.003)GLGDGK;EKGS(0.008)FS(0.992)DTGLGDGK 284.46 1.8787e-32 7506070000.0 7253510.0 6609150.0 6318680.0 6284530.0 6495040.0 6692200.0 5958990.0 6804240.0 8311630.0 6601930.0 True False 6851143.340786292 6291636.513463603 6725992.2230454665 6881809.841687164 7006162.696277578 6650431.497454458 6561382.863337983 6780637.679561562 6802447.511141572 6543442.036423824 1.047024379928738 0.9615178798010964 1.0278981896080814 1.0517109807620866 1.0707151767033372 1.0163506393783397 1.0027418026803465 1.0362493687293932 1.0395824511436036 1.0 22.64161830330011 -4.971650586138927 24.989652755142505 1.0329891471715202 1.0018803347903669 0.12244118179195662 0.027883685669001526 358.40640180525145 315926.5463526742 0.007240915752900703 0.01507277343515553 1.0674546019314338e-05 4.971650586138927 -0.031108812381153372 EKGTWVQLK ddPTM_KYSE-520_SHP099_60min_R1 2 EKGTWVQLK 9 1 P46778 P46778 RPL21 60S ribosomal protein L21 0 ; 158.79 0.00016756 2612800000.0 5196300.0 5455900.0 3248900.0 3449600.0 6423000.0 6021200.0 4314200.0 5723600.0 5422000.0 5381200.0 False True 4908050.880432759 5193790.3745271405 3458329.2924237917 3777448.9468399435 6928453.558129102 5983619.457349264 4750321.438534495 5703746.167498288 4437501.477497143 5333526.754510243 0.9202261667258564 0.9738003789209576 0.6484132266701934 0.7082459919499947 1.2990379306281954 1.1218879613361414 0.8906529688854441 1.069413622548152 0.8320013532780377 1.0 22.34665838911167 -5.730608113756315 24.999991439329296 1.0360471632415929 0.8124479224046441 0.3543357775421321 0.1473554133492231 245.51653133602588 199079.7013083262 0.04590286531770296 0.05925375949831645 1.8594816041602687e-06 5.730608113756315 -0.2235992408369487 EKHEEKLR ddPTM_KYSE-520_SHP099_60min_R1 2 EKHEEKLR 8 2 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 0 ; 53.17 0.040299 8010700000.0 13931600.0 9487500.0 8063400.0 4234200.0 12117800.0 11260600.0 8691900.0 10509100.0 9993500.0 9385600.0 False True 13158786.376043916 9031706.258972172 8583179.665896166 4636617.094941353 13071401.919149464 11190318.418492509 9570562.076769281 10472646.384942375 8178932.315634034 9302450.885886298 1.4145504811004657 0.9708953446532138 0.9226793853777382 0.4984296237431407 1.4051567785196724 1.202943026065366 1.028821564786734 1.1257943216697333 0.8792233805870591 1.0 23.149179437703943 -7.763650866439934 24.98395603512737 0.9396117108161289 1.0578912415242783 0.040634820920570025 0.24908561259613513 260.09515384334037 2938049.146934746 0.21072541042790044 0.06471223416164512 1.723253358434586e-08 7.763650866439934 0.11827953070814934 EKHFQQQEQER ddPTM_KYSE-520_SHP099_60min_R1 2 EKHFQQQEQER 11 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 0 ; 214.0 1.1500999999999998e-09 648517000.0 465057.0 410326.0 298865.0 268672.0 428845.0 357657.0 300409.0 371623.0 356957.0 319680.0 False True 439259.361141855 390613.32304811786 318130.316100907 294206.50610081776 462592.66170572635 355424.7299968724 330777.27342930576 370333.92655046046 292142.6069536973 316847.8839072766 1.38634146999827 1.232810262865534 1.0040474696495232 0.9285418052118515 1.459983434325542 1.121751944857189 1.0439623877245319 1.1688066904017456 0.9220279566051666 1.0 18.273430854852045 -4.499455856560582 3.9123426938852783 1.0955776593447577 1.368003954341638 0.2973147576647588 0.14774554912901453 0.28933243870191433 9.468621788247077 0.03856347128886737 0.15663746761608333 3.166242276687658e-05 4.499455856560582 0.2724262949968803 EKHLDLEK ddPTM_KYSE-520_SHP099_60min_R1 2 EKHLDLEK 8 1 A0A5F9ZH72;A0A5F9ZH31;A0A5K1VW54;A0A5K1VW94;P55263-3;P55263-2;P55263;A0A5F9ZGZ8;A0A5F9ZHJ1;P55263-4 A0A5F9ZH72 ADK Adenosine kinase 0 ; 127.3 0.00083957 886320000.0 2546000.0 2391500.0 1610370.0 1208010.0 1838340.0 1847040.0 1289140.0 1549400.0 1732070.0 1666370.0 False True 2404768.3046748275 2276608.750285317 1714177.026883103 1322818.907198551 1983006.8992762067 1835511.938235299 1419458.8519939648 1544025.4930326773 1417569.749931478 1651607.2582162418 1.456017035958058 1.3784201655447346 1.0378841691059395 0.800928247692017 1.2006528122296345 1.111348917307179 0.8594409142564555 0.9348623804791496 0.8582971180827047 1.0 20.655439233087478 -4.76296010732139 3.743902722440969 0.9712726393501901 1.4377315168183131 0.7111659681351724 0.11378764487832914 0.11648853278440001 3.4985590502404835 0.03175813919603507 0.08482742245975111 1.7259964283322457e-05 4.76296010732139 0.466458877468123 EKHQIMHR ddPTM_KYSE-520_SHP099_60min_R1 2 EKHQIMHR 8 1 P36507;G5E9C7;A0A1B0GUL7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 0 ; 68.735 0.022042 103555000.0 164993.0 156371.0 128767.0 111817.0 198290.0 166827.0 126417.0 124746.0 128906.0 105471.0 False True 155840.50938460886 148858.70244234396 137067.52685448446 122444.05406099308 213894.29488423167 165785.7708116666 139196.46407102497 124313.28524193513 105499.91985581831 104536.60899519625 1.490774484484858 1.4239863323783961 1.3111916310656595 1.1713030988657736 2.0461185506224018 1.5859111215218862 1.3315571014688399 1.1891842143803197 1.0092150574796848 1.0 16.673648740825822 -7.307056822673788 2.003857095285039 1.0161764222231955 1.4975577930117956 0.4592594793979823 0.21607930490961902 0.3541568629429444 2.63605522617285 0.17381635614088126 0.06788330424343413 4.931092817881814e-08 7.307056822673788 0.4813813707886001 EKIESEK ddPTM_KYSE-520_SHP099_60min_R1 1 EKIESEK 7 1 P54727;Q5W0S4;Q5W0S5 P54727 RAD23B UV excision repair protein RAD23 homolog B 0 54.608000000000004 0.068111 426390000.0 339610.0 342130.0 162480.0 157780.0 373260.0 367710.0 241980.0 301450.0 307020.0 514430.0 False True 320771.15630424896 325693.5612524 172953.72077719166 172775.36376171315 402633.43844111334 365414.98549490125 266441.699897218 300404.34030895855 251272.9073443698 509872.55042048404 0.6291202694471666 0.6387744564476074 0.3392097115927488 0.338859904537375 0.7896746708742562 0.7166790704727076 0.5225652953419194 0.5891753538432687 0.492815130246076 1.0 18.959777145334808 -5.764771762880424 24.999560279968687 0.6580573983160103 0.48684838043842976 0.2471449144515554 0.16586527550951652 150.02686071640227 1125502.6406945237 0.052133706149701316 0.061553335501561966 1.7188114460843759e-06 5.764771762880424 -0.17120901787758053 EKIETELR ddPTM_KYSE-520_SHP099_60min_R1 8 EKIETELR 8 1 P63104;E7EX29;B0AZS6;E7ESK7;E9PD24;E7EVZ2 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ;;;;;;; 134.68 0.00081101 11414630000.0 29794500.0 26338170.0 16304270.0 14474740.0 23079210.0 23287290.0 17665620.0 19853020.0 18937440.0 20176560.0 False True 28141739.691136785 25072844.77880082 17355269.331954356 15850414.937610747 24895412.524257958 23141945.385128383 19451433.269436713 19784154.50734972 15498878.270013541 19997811.375526167 1.4072409806593817 1.2537794415585701 0.8678584374085145 0.7926074828872969 1.2449068578937392 1.1572239056845033 0.9726781048271049 0.9893159874266078 0.7750287258425421 1.0 24.253338779688892 -4.596371839596872 4.730322704396149 0.9850608715383535 1.3750398131819404 0.5201584366551371 0.1395204735254567 0.15863564590033286 6.482751378564616 0.038632945685286635 0.11305665596808401 2.532959001794913e-05 4.596371839596872 0.3899789416435868 EKIKWT(ph)TTIIIS(ph)S(ph)S(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 1 EKIKWTTTIIISSSLK 16 2 Q5VVC0 Q5VVC0 C1orf146 Uncharacterized protein C1orf146 4 EKIKWT(0.414)T(0.414)T(0.173)IIIS(1)S(1)S(1)LK 56.29 0.068194 0.0 45749.0 43682.0 44471.0 38347.0 43866.0 46765.0 35055.0 46724.0 52898.0 39137.0 True False 43211.211771629525 41583.45115198127 47337.671816115806 41991.48735055406 47318.00463660153 46473.122288404054 38598.70150383083 46561.925349463585 43293.05665006344 38790.27662812527 1.1139701886090396 1.0720070792645697 1.2203489103708316 1.0825261122295715 1.2198418972421854 1.1980611206754908 0.9950612591363802 1.2003504330696988 1.116080121446553 1.0 15.24340744385913 -8.031310212042493 23.22448776736051 0.9999999980057576 1.1378368099152032 0.2549382699604009 0.07029601836830057 2244.5553130000285 1664907.7976635227 0.06581691021029001 0.016993853104151923 9.304430322464708e-09 8.031310212042493 0.13783681190944563 EKIYSAER ddPTM_KYSE-520_SHP099_60min_R1 2 EKIYSAER 8 1 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9;E9PKD3 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic 0 ; 82.287 0.009261499999999999 753700000.0 1165540.0 1285850.0 848910.0 713590.0 1120490.0 936780.0 739800.0 800530.0 1000800.0 762210.0 False True 1100885.1727536146 1224075.8358998017 903632.0969040238 781409.3790513426 1208666.1882839927 930933.2085391019 814586.2037522184 797753.1482751062 819079.9481149279 755457.412390406 1.4572431942526207 1.6203108419131145 1.196139030583823 1.0343526534193632 1.5999130704926845 1.2322775490327882 1.0782688612118028 1.0559869228774508 1.084217236711211 1.0 19.526990902672786 -1.000000000013893 0.16589900678063713 0.9274332158798687 3.3657677321679844 0.46036096235475044 0.16546609053581987 57.68786736827727 0.6126716438883241 0.47986338175297244 34.70052278968695 0.099999999996801 1.000000000013893 2.4383345162881156 EKKEEWDR ddPTM_KYSE-520_SHP099_60min_R1 6 EKKEEWDR 8 2 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 0 ;;;;; 102.06 0.0015686 40215600000.0 16182500.0 17706500.0 13904780.0 11322920.0 16754200.0 16343800.0 13119820.0 14788380.0 16956300.0 10571200.0 False True 15284824.465986012 16855853.16200166 14801104.367234623 12399046.912439957 18072660.221642036 16241792.281775218 14446099.442704033 14737082.561413854 13877463.35353831 10477547.392269159 1.4588170202182902 1.608759429180795 1.4126497178295365 1.1833921096447222 1.7248941517531975 1.5501521180194515 1.3787672727076439 1.4065393368955397 1.3244954027865121 1.0 23.320797711324264 -8.281009099732602 0.9434258598323799 0.9998368115084755 1.4815420012529639 0.5299659025234179 0.13507703056153697 0.8230236045467402 1.4006531124179469 0.13531266407393916 0.04497516569159959 5.235894657485749e-09 8.281009099732602 0.4817051897444884 EKKEEWDRK ddPTM_KYSE-520_SHP099_60min_R1 1 EKKEEWDRK 9 3 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 0 72.652 0.010156 294870000.0 585920.0 662420.0 606260.0 507170.0 571300.0 543070.0 508310.0 488390.0 747220.0 229330.0 False True 553417.8495974371 630596.3488873087 645340.4896502967 555371.2843137787 616258.059747651 539680.4986884113 559694.9354275346 486695.88908108306 611543.6838833297 227298.31461604044 2.4347644219548576 2.7743115911463407 2.83917850750643 2.44335856714085 2.711230220904426 2.3743268822738823 2.462380490471252 2.141220844084239 2.690489302203445 1.0 17.794227461258235 -10.41721049188432 0.3409680747717893 9.059196597762425e-15 2.656618049495391 0.8438353541275022 0.1994442282450316 7.60421417998433 0.5458561039217891 7.003598501499002 0.1644905274434027 3.826392425099783e-11 10.41721049188432 2.656618049495382 EKKPGDGEVS(ph)PSTEDAPFQHSPLGK ddPTM_KYSE-520_SHP099_60min_R1 1 EKKPGDGEVSPSTEDAPFQHSPLGK 25 2 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 EKKPGDGEVS(0.987)PS(0.007)T(0.007)EDAPFQHSPLGK 116.34 0.00018319999999999998 1088900000.0 731590.0 752050.0 629060.0 708110.0 719820.0 715260.0 657210.0 857240.0 941410.0 739200.0 True False 691007.2443114922 715920.3891499355 669610.2141315863 775408.5614989647 776465.7387844463 710795.797027775 723647.2005514948 854266.4345213211 770473.6750148631 732651.2630888982 0.9431598348690038 0.9771639321709152 0.9139549030577967 1.0583596870218983 1.059802634490554 0.970169346369541 0.987710302307483 1.1659932597668454 1.0516240315569834 1.0 19.482767123363047 -5.273002617578315 0.6906252670413309 1.0558800778475526 0.9266361950422143 0.30420483658458797 0.057647185036803966 1.4154214572497634 1.1545068755742802 0.03282365101699618 0.11915007732247228 5.33331680982929e-06 5.273002617578315 -0.12924388280533827 EKKPGDLSDELR ddPTM_KYSE-520_SHP099_60min_R1 1 EKKPGDLSDELR 12 2 Q13435;E9PPJ0;H0YEX5 Q13435 SF3B2 Splicing factor 3B subunit 2 0 94.551 0.0014424000000000001 650380000.0 1281700.0 1147500.0 716540.0 843390.0 1197700.0 1069100.0 553400.0 970740.0 1080800.0 1012800.0 False True 1210601.5459943945 1092372.3775673837 762729.3149045357 923545.5320255498 1291952.1760191852 1062427.3503374914 609343.0726635284 967372.7295124189 884553.9647508133 1003827.3799464774 1.2059857802035068 1.0882073944084165 0.7598211905170422 0.9200242496621202 1.287026237606779 1.0583765411879267 0.6070197773406197 0.9636843433818251 0.8811813489267213 1.0 19.93707977137533 EKLCYVALDFEQEMATAASSSSLEK ddPTM_KYSE-520_SHP099_60min_R1 10 EKLCYVALDFEQEMATAASSSSLEK 25 1 P60709;A0A2R8Y793;Q6S8J3;A0A2R8YEA7;P63261;I3L4N8 P60709;P63261 ACTB;POTEE;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;;;;;;;;; 316.82 4.798899999999999e-61 6426821000.0 4626466.0 4117231.0 2790923.0 5589830.0 2864649.0 2640465.0 2718485.0 3805514.0 3330315.0 2019904.0 False True 4369826.708348678 3919433.042670272 2970830.3622146896 6121085.762556331 3090080.578676784 2623984.878504237 2993295.993656865 3792313.560147648 2725613.746409236 2002009.2220215325 2.1827205690572384 1.9577497443856013 1.4839244143015926 3.057471311933096 1.5434896826082396 1.3106757199922703 1.4951459567375913 1.8942537918573386 1.3614391564375725 1.0 20.933017189119504 -5.964320218596755 24.999708002159277 1.468227028637213 2.130514897155373 0.4253313473135949 0.41804147214622395 189.49523651491856 132772.6027888266 0.12756361134004826 0.14464307793410144 1.0856248640441135e-06 5.964320218596755 0.6622878685181599 EKLDSVIEFSIPDSLLIR ddPTM_KYSE-520_SHP099_60min_R1 1 EKLDSVIEFSIPDSLLIR 18 1 F8VZG5;A0A5F9ZHP2;F8W1A4;P54819-4;P54819-6;P54819-3;P54819-2;P54819;F8VY04;A0A5K1VW67 F8VZG5 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed 0 66.325 0.021457 47379000.0 105960.0 83339.0 85104.0 82869.0 109240.0 70951.0 61953.0 75520.0 90399.0 71620.0 False True 100082.18757397681 79335.26934561078 90589.94001121442 90744.84484452664 117836.56650942308 70508.16849106282 68215.8138430133 75258.03874650053 73984.82037334274 70985.50251951691 1.4098961621981896 1.1176263677755631 1.2761752300944467 1.2783574338940131 1.660008907833326 0.9932756124629413 0.9609823333188053 1.0601888565317814 1.0422525409748447 1.0 16.115236790380152 -6.3559126383084195 24.99999999996624 1.0119519970402704 1.3277182046624534 0.6200558524765205 0.13142957970988806 39.737138710235 10512.555980665675 0.04730010381997464 0.04171477467737593 4.40643493436277e-07 6.3559126383084195 0.315766207622183 EKLEDFFK ddPTM_KYSE-520_SHP099_60min_R1 2 EKLEDFFK 8 1 G3V5X9;A0A0A0MRI2;Q9UNH7-2;Q9UNH7 G3V5X9 SNX6 Sorting nexin-6;Sorting nexin-6, N-terminally processed 0 ; 93.111 0.0042679 1159650000.0 1322570.0 1209900.0 808600.0 718830.0 1280070.0 1158580.0 904750.0 992780.0 1007320.0 1001680.0 False True 1249204.4056220695 1151774.5879030742 860723.6498057438 787147.3870758797 1380804.226397997 1151348.8724665714 996210.9595090842 989336.2778965943 824416.0804707528 992805.8944952467 1.258256435168708 1.160120618027403 0.8669606562351698 0.7928512425644633 1.390809859262583 1.159691817756511 1.0034297389174636 0.996505241741724 0.8303899936954896 1.0 19.921152155511262 -7.190264447114627 2.4262805407579675 0.9249988452918644 1.0932589240078252 0.1553940092191639 0.1691856157091358 0.661800863223659 7.502547932681217 0.11365754804513642 0.0528145330967828 6.452612021086058e-08 7.190264447114627 0.16826007871596083 EKLEMEMEAAR ddPTM_KYSE-520_SHP099_60min_R1 3 EKLEMEMEAAR 11 1 Q15233-2;Q15233;H7C367;C9JYS8 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 0 ;; 125.61 0.00020399 865050000.0 1447080.0 1254390.0 865150.0 883830.0 1263890.0 1209790.0 929530.0 1173570.0 1181720.0 1100890.0 False True 1366807.5877175375 1194127.221522223 920918.9532889421 967828.9374668217 1363350.952449603 1202239.2518611844 1023495.9637385788 1169499.159583298 967149.4367369834 1091136.9710794596 1.2526452901374587 1.094388012845789 0.8439994040142172 0.8869912422721324 1.2494773695559436 1.101822487667897 0.938008692644734 1.0718170042632822 0.8863684966885361 1.0 20.057400784728745 -4.397750058762717 3.907896154533839 1.004777578364688 1.2485959661059793 0.31169822476777165 0.11548666142413931 0.3050543477921707 7.373236697069917 0.030787123300432255 0.15504623831297826 4.001749885969489e-05 4.397750058762717 0.2438183877412914 EKLLS(ph)GSESSSK ddPTM_KYSE-520_SHP099_60min_R1 4 EKLLSGSESSSK 12 1 G3XAI9;Q5BKY9-2;Q5BKY9 G3XAI9 FAM133B Protein FAM133B 1 EKLLS(0.962)GS(0.038)ESSSK;EKLLS(0.951)GS(0.043)ES(0.005)S(0.001)SK;EKLLS(0.996)GS(0.004)ESSSK;EKLLS(0.963)GS(0.036)ES(0.001)SSK 139.5 8.0609e-05 671910000.0 1411230.0 1262540.0 1293600.0 1225500.0 1337490.0 1295770.0 1274580.0 1298850.0 1646630.0 1277800.0 True False 1332946.2586827422 1201885.6832888252 1376987.5258331802 1341971.151539991 1442742.8537228862 1287682.6187885245 1403426.9851020596 1294344.592503868 1347643.5001643526 1266479.6861133578 1.0524813570230729 0.9489972057721966 1.0872559117461686 1.0596073243450952 1.1391756769115298 1.0167416287111841 1.1081322507500875 1.0220018581395676 1.0640861554598438 1.0 20.272392506241502 -4.778886273652576 24.999584321396814 1.065595044678673 1.0007392467084189 0.21489564150565565 0.04655649673342531 279.7176965471079 400807.2540325523 0.011369893609974903 0.023758273876141087 1.6638482962832472e-05 4.778886273652576 -0.0648557979702542 EKLNGDTEEGFNRLS(ph)DEFSK ddPTM_KYSE-520_SHP099_60min_R1 1 EKLNGDTEEGFNRLSDEFSK 20 2 Q9BQ39;A0A087WVC1 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 1 EKLNGDTEEGFNRLS(1)DEFSK 175.48 1.9969e-09 583840000.0 553350.0 455960.0 455680.0 440270.0 509510.0 503620.0 437180.0 545110.0 583050.0 512410.0 True False 522654.5724241226 434054.99719008687 485053.86191377806 482113.1284279974 549605.5382846583 500476.72077164665 481374.4208656326 543219.1406396305 477182.8174944135 507870.446048948 1.0291100348330757 0.8546569318354333 0.9550740069388269 0.9492836848032143 1.0821766506800987 0.985441709918697 0.9478291651159364 1.0696017948389847 0.939575872561057 1.0 18.95410099765482 -5.553302255261803 24.998378031710185 1.0049185958001183 0.9396280621834046 0.18641878448092852 0.057923081028035464 293.3268734441879 241019.19155184086 0.016334294482618635 0.021087743939389596 2.797033994632462e-06 5.553302255261803 -0.06529053361671378 EKLNIGYIEDLK ddPTM_KYSE-520_SHP099_60min_R1 4 EKLNIGYIEDLK 12 1 P05120;H7C004;H7BYS2 P05120 SERPINB2;SERPINB10 Plasminogen activator inhibitor 2 0 ;;; 180.48 6.036e-07 9726320000.0 13749670.0 12863950.0 7814100.0 7854470.0 12738220.0 11553550.0 8606180.0 9364730.0 9136720.0 9507710.0 False True 12986948.395812396 12245946.53281739 8317809.389002052 8600956.467267487 13740645.443442538 11481440.008878238 9476176.662622688 9332245.937374411 7477721.965967853 9423479.086286457 1.3781479511862755 1.299514374753411 0.8826686314937088 0.9127156104993167 1.4581287142069057 1.2183865325903502 1.0055921571909592 0.9903185280004693 0.7935203015253492 1.0 23.167828360996555 -6.947236578487772 3.1427388688483386 0.9251893503419844 1.1812414848707367 0.31273205673328797 0.17900852229064057 0.36245153779287287 7.283503896472887 0.09370839387164992 0.057109328898803415 1.1291806348741163e-07 6.947236578487772 0.2560521345287523 EKLQEEGGGS(ph)DEEETGSPS(ph)EDGMQSAR ddPTM_KYSE-520_SHP099_60min_R1 1 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 2 EKLQEEGGGS(1)DEEET(0.039)GS(0.047)PS(0.914)EDGMQSAR 123.01 0.00016268 462170000.0 546770.0 499730.0 546430.0 427430.0 414460.0 400430.0 364610.0 433150.0 633250.0 442770.0 True False 516439.5781410272 475722.2206899776 581653.7521189124 468052.81868848414 447075.64404517994 397930.7678380334 401468.3370506846 431647.5037479705 518267.7629334309 438847.40226984775 1.1768090125858097 1.0840265163457785 1.325412316696939 1.0665502775397038 1.0187496649923715 0.9067634120193454 0.9148244582836138 0.9835936170873127 1.1809748907087012 1.0 18.74335984185084 -5.501218640053778 5.2962386863322015 0.9943131842954216 1.1871772484073744 0.48511375677369695 0.08925051815021605 0.16028064953824153 13.30030892310909 0.026733155879680812 0.03804518160793046 3.153416676024965e-06 5.501218640053778 0.19286406411195278 EKLQEEGGGS(ph)DEEETGSPSEDGMQSAR ddPTM_KYSE-520_SHP099_60min_R1 9 EKLQEEGGGSDEEETGSPSEDGMQSAR 27 1 Q13610-2;Q13610 Q13610-2 PWP1 Periodic tryptophan protein 1 homolog 1 EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR;EKLQEEGGGS(1)DEEETGSPSEDGMQSAR 312.14 1.3917999999999997e-64 16780150000.0 6542570.0 6015930.0 5949500.0 5285900.0 5368870.0 5276510.0 5211510.0 5458560.0 7062990.0 5325820.0 True False 6179640.599810058 5726915.692704971 6333014.28953658 5788270.346736209 5791369.524308363 5243577.343867993 5738340.290236184 5439625.529397484 5780529.059488672 5278637.378225265 1.1706885995430358 1.0849231122275769 1.1997441452714088 1.0965463114805374 1.0971334284484386 0.9933581278945401 1.0870874203079803 1.030498050848559 1.095079780121617 1.0 22.331734131221143 -5.779734641068543 2.1936467212995527 1.046612045476489 1.1440785904094015 0.5343856308591881 0.042878237032341206 0.24014947575791376 2.373637584137055 0.013574428348414718 0.01721267038992263 1.660601244010333e-06 5.779734641068543 0.09746654493291262 EKLQQEAK ddPTM_KYSE-520_SHP099_60min_R1 2 EKLQQEAK 8 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 99.01299999999999 0.018104 0.0 826960.0 869190.0 687790.0 646270.0 865300.0 826140.0 655040.0 749320.0 806210.0 769240.0 False True 781086.8802961092 827432.807719212 732126.0439029096 707691.30649184 933394.1871164741 820983.7538189263 721257.8357743362 746720.7838126031 659822.5869002158 762425.1320596649 1.0244768272342102 1.0852643399672977 0.9602595889318294 0.9282108848904765 1.2242437294727448 1.0768057338312909 0.9460048015808232 0.9794021109920169 0.8654260715642047 1.0 19.540236150479327 -6.7708981614449435 24.451376945365002 0.9459917099288485 1.0498073558784837 0.2738910228268647 0.0814765462860884 224.27108817946515 579743.508747319 0.035503589553487834 0.024308798230059474 1.6947351555895465e-07 6.7708981614449435 0.10381564594963522 EKLQSFDS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 6 EKLQSFDSPER 11 1 E9PGM9;P78332-2;P78332 E9PGM9 RBM6 RNA-binding protein 6 1 EKLQS(0.002)FDS(0.998)PER;EKLQSFDS(1)PER;EKLQSFDS(1)PER;EKLQSFDS(1)PER;EKLQSFDS(1)PER;EKLQSFDS(1)PER 175.29 1.2740999999999999e-05 8960810000.0 10577560.0 9543690.0 9249750.0 8593200.0 9264080.0 9340900.0 8332740.0 8251270.0 10948810.0 8899290.0 True False 9990801.660956897 9085196.807029257 9846003.685123278 9409895.144360216 9993110.39059516 9282599.97826908 9175094.678905461 8222648.270230905 8960782.10103937 8820449.214142855 1.1326862632956924 1.0300152051736662 1.1162700953298423 1.066827200736243 1.1329480106945167 1.0523953772541657 1.0402071885629092 0.9322255670432945 1.0159099478370675 1.0 23.072420701582367 -6.8630439029572425 2.3052661156504954 0.981251736026651 1.0905783775067899 0.6186878536257265 0.037249555809193396 0.18477248917136813 1.9931733439261239 0.017568754600752506 0.01068695794262149 1.3707431903273136e-07 6.8630439029572425 0.10932664148013893 EKLS(ph)PWPADLEK ddPTM_KYSE-520_SHP099_60min_R1 1 EKLSPWPADLEK 12 1 A0A3B3ITQ0;Q9H816 A0A3B3ITQ0 DCLRE1B 5 exonuclease Apollo 1 EKLS(1)PWPADLEK 118.24 9.038899999999999e-05 192170000.0 466530.0 433040.0 367290.0 367350.0 379330.0 382980.0 359000.0 350380.0 443110.0 414540.0 True False 440650.6508955017 412236.10839370854 390966.10108477855 402262.83355219505 409181.1129075382 380589.67976078246 395291.2235023614 349164.6135593067 362652.3938940903 410867.4981072399 1.0724884614272607 1.0033310259214308 0.9515624937135648 0.9790573248195968 0.9958955497636819 0.9263075845961545 0.9620892996485866 0.8498229116876307 0.8826504787181657 1.0 18.648313684294784 -1.000000760486545 0.3635539267052054 0.9165312204755669 2.862362559468634 0.4797632521707279 0.04390999234563746 54.696183792532324 0.7619595972880768 0.036607494563909916 73.88096201036011 0.0999998248916551 1.000000760486545 1.9458313389930673 EKLTRPAAS(ph)PAVGEK ddPTM_KYSE-520_SHP099_60min_R1 3 EKLTRPAASPAVGEK 15 2 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-4;Q8N2M8-3 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 1 EKLT(0.063)RPAAS(0.937)PAVGEK;EKLT(0.105)RPAAS(0.895)PAVGEK;EKLT(0.002)RPAAS(0.998)PAVGEK 83.06299999999999 0.0039745 2132080000.0 2543250.0 2385290.0 2283670.0 1972640.0 2122670.0 2183000.0 1674260.0 1608780.0 2636980.0 1977080.0 True False 2402170.852656816 2270697.088006714 2430879.0222011902 2160119.1125041554 2289712.052659801 2169375.0872572637 1843510.540002959 1603199.5176720766 2158170.9048562157 1959564.6093449637 1.2258696861543164 1.1587763308124628 1.2405199658171904 1.102346461148955 1.1684799989448666 1.1070699465134934 0.9407755841330495 0.8181406777947415 1.101352256804455 1.0 20.90210171054442 -6.62725395772445 3.288387915416002 0.9493930771808454 1.1753253019902352 0.6437901956414952 0.07471620942055941 0.14669512489389075 3.142657373401419 0.03012366663771586 0.022530921693956873 2.3590983251470785e-07 6.62725395772445 0.2259322248093898 EKMNEEHNKR ddPTM_KYSE-520_SHP099_60min_R1 1 EKMNEEHNKR 10 2 A0A2R8Y7R9;Q13136-2;Q13136;E9PJZ7;H0YEF9;G3V200;H0YHK3;F8VWG6;F8W1Y8;F8VYK7;O75334-3;O75334-4;O75334-2;O75334-5;O75334-6;O75334-7;O75334 A0A2R8Y7R9 PPFIA1;PPFIA2 Liprin-alpha-1;Liprin-alpha-2 0 172.27 5.516e-05 459790000.0 564500.0 662970.0 210790.0 145730.0 843540.0 977580.0 336970.0 389840.0 342970.0 441330.0 False True 533186.0596971489 631119.9260617427 224377.86067592475 159580.13538467773 909921.79891394 971478.5606051121 371034.2161102797 388487.7360293405 280695.2935701208 437420.15954954416 1.2189334397532674 1.442823135338963 0.5129572923822014 0.36482117227750444 2.0802008756317463 2.220927726800571 0.8482330043781504 0.8881340458322855 0.641706349015055 1.0 18.738660186391037 -6.942210049370876 24.999992355426606 0.8325478357875579 1.2913313296101796 0.14366002168326508 0.5519505080126158 183.1298891352198 79221.2711633599 0.25859509411358195 0.17434476106265936 1.1423257078486948e-07 6.942210049370876 0.45878349382262174 EKNGS(ph)EEDDDEKPGKR ddPTM_KYSE-520_SHP099_60min_R1 2 EKNGSEEDDDEKPGKR 16 3 Q6ZU65;Q6ZU65-2;H7C4P8 Q6ZU65 UBN2 Ubinuclein-2 1 EKNGS(1)EEDDDEKPGKR;EKNGS(1)EEDDDEKPGKR 111.49 0.00028442 1696830000.0 1965410.0 1783960.0 1637340.0 1606720.0 1579960.0 1496620.0 1510540.0 1798930.0 2146050.0 1388040.0 True False 1856384.789352301 1698255.883821447 1742885.5562366287 1759422.185722019 1704293.863257303 1487279.0394369988 1663240.1246497384 1792689.931703419 1756381.4175180271 1375743.0454787777 1.3493688341388295 1.2344281073435703 1.2668685202257957 1.278888664205252 1.2388169933755215 1.0810732747839586 1.2089758549867193 1.3030703208676138 1.2766783908449866 1.0 20.391779605039503 -10.914565766499635 2.4135812404542807 0.8476751043700878 1.244900843912435 0.5511624549973216 0.06724699515080663 5406005.512886909 2562477.0243519843 4652848.133899854 0.017848288675243355 1.2174026240009415e-11 10.914565766499635 0.3972257395423472 EKNLER ddPTM_KYSE-520_SHP099_60min_R1 1 EKNLER 6 1 A0A5F9ZHS1;A0A5F9ZGX3;A0A5F9ZHR8;A0A5F9ZH39 A0A5F9ZHS1 0 73.975 0.03832 846790000.0 1149900.0 1161600.0 469990.0 518960.0 1455600.0 1700500.0 812800.0 867100.0 998190.0 2080500.0 False True 1086112.7547311794 1105794.9924028523 500286.30741058756 568281.8023689871 1570147.4387689135 1689886.5487315524 894965.7561635626 864092.232482662 816943.8583221822 2062068.3886045094 0.5267103461423986 0.5362552466803447 0.2426138289958234 0.2755882421307898 0.76144295089626 0.8195104284951342 0.43401361521730353 0.419041500882243 0.39617689832054664 1.0 20.97566074987911 -5.755794276505883 24.999938852621607 0.6081560869793535 0.39445515913047635 0.2506680652220097 0.2018708093561211 241.64697757993918 1070152.7623541031 0.06353250703331398 0.07972249173729087 1.7547115045640718e-06 5.755794276505883 -0.21370092784887718 EKNPDMVAGEKR ddPTM_KYSE-520_SHP099_60min_R1 1 EKNPDMVAGEKR 12 2 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 77.64399999999999 0.008962799999999998 372220000.0 262780.0 277470.0 292910.0 426890.0 223190.0 267260.0 191400.0 186670.0 213890.0 247450.0 False True 248203.06956105694 264139.92470903904 311791.44727257016 467461.4972508408 240753.7832226117 265591.93120493647 210748.57988398857 186022.48533910574 175052.9677281193 245257.78551318665 1.0120089319150765 1.0769889492247624 1.2712805288532063 1.9060006444757982 0.9816356398996647 1.082909277066177 0.8592941481674488 0.7584773912471944 0.7137509105443152 1.0 17.90393940881399 -6.44448589206571 1.8297634696926588 0.8105997549657871 1.286848681543085 0.3871016133101972 0.2505103520316579 0.3769219409281737 2.514436198499122 0.11891075176588403 0.09529440457808233 3.593470698544454e-07 6.44448589206571 0.476248926577298 EKNT(ph)SSETTMEEELGLVGATADDTEAELIR ddPTM_KYSE-520_SHP099_60min_R1 2 EKNTSSETTMEEELGLVGATADDTEAELIR 30 1 Q15021;E7EN77 Q15021 NCAPD2 Condensin complex subunit 1 1 EKNT(0.2)S(0.2)S(0.2)ET(0.2)T(0.2)MEEELGLVGATADDTEAELIR;EKNT(0.2)S(0.2)S(0.2)ET(0.2)T(0.2)MEEELGLVGATADDTEAELIR 102.79 1.4759000000000001e-06 124700000.0 114810.0 141820.0 111258.0 97147.0 101626.0 125288.0 93104.0 122749.0 168295.0 120349.0 True False 108441.26043193902 135006.75432384008 118429.86869909412 106379.8216716893 109623.38802715702 124506.03111877615 102515.8609274759 122323.21236883185 137736.87037170448 119282.80149010518 0.909110610056677 1.1318207875511648 0.992849490619301 0.8918286655139783 0.9190209037490671 1.0437886230321667 0.8594353892332068 1.0254890968416674 1.154708546840511 1.0 16.864026520876536 -7.522499000236622 24.999895025861985 1.0816024898497398 0.9681355830815482 0.23441706378578453 0.08286443431177265 20.749697490599498 1366579.4604932098 0.054354112546904185 0.021047189505081425 3.002624333015383e-08 7.522499000236622 -0.1134669067681916 EKNTSS(ph)ETTMEEELGLVGATADDTEAELIR ddPTM_KYSE-520_SHP099_60min_R1 1 EKNTSSETTMEEELGLVGATADDTEAELIR 30 1 Q15021;E7EN77 Q15021 NCAPD2 Condensin complex subunit 1 1 EKNT(0.154)S(0.154)S(0.231)ET(0.231)T(0.231)MEEELGLVGATADDTEAELIR 219.35 1.2624e-22 29539000.0 38675.0 39829.0 37251.0 33693.0 27085.0 34090.0 32941.0 30476.0 52944.0 42113.0 True False 36529.62065329891 37915.55505545218 39652.25906370736 36895.17258983015 29216.43540743064 33877.23166495657 36270.99775317901 30370.285869151892 43330.70420962904 41739.911583418194 0.8751724492825914 0.9083765062529434 0.9499842610941183 0.8839303005252965 0.6999639984632192 0.8116268190279254 0.8689763915932253 0.7276078150873934 1.0381120267356487 1.0 15.349139924026613 -7.78292764993397 24.99923140207472 1.0190562658474263 0.843325789887718 0.48215497721946465 0.07389377066481485 255.74955907196156 297528.076774881 0.07632119484328141 0.01977942257011611 1.6484369853690645e-08 7.78292764993397 -0.17573047595970825 EKNTSSET(ph)TMEEELGLVGATADDTEAELIR ddPTM_KYSE-520_SHP099_60min_R1 1 EKNTSSETTMEEELGLVGATADDTEAELIR 30 1 Q15021;E7EN77 Q15021 NCAPD2 Condensin complex subunit 1 1 EKNT(0.181)S(0.181)S(0.181)ET(0.228)T(0.228)MEEELGLVGATADDTEAELIR 73.868 0.050847 32518000.0 43637.0 46537.0 36016.0 33042.0 32420.0 41189.0 36207.0 37555.0 55514.0 38654.0 True False 41216.36862179712 44301.292666538895 38337.64898763749 36182.30174556047 34971.26955543295 40931.92417271623 39867.15690626736 37424.730470402916 45434.05699405687 38311.555632356954 1.0758208050154674 1.1563428301283376 1.0006810831575448 0.9444226721767943 0.9128125699468365 1.0683962970729954 1.040603970479251 0.9768522800153526 1.1859100014118047 1.0 15.225491986817937 -10.013085857806562 13.84757714673656 0.9999878309620974 1.0348717420938298 0.017320133706798302 0.08247187158637165 0.0 0.0 0.08318689186067955 0.02017578481225976 9.703181213333261e-11 10.013085857806562 0.03488391113173239 EKPAQDPLY(ph)DVPNASGGQAGGPQRPGR ddPTM_KYSE-520_SHP099_60min_R1 1 EKPAQDPLYDVPNASGGQAGGPQRPGR 27 2 Q13671;Q13671-2 Q13671 RIN1 Ras and Rab interactor 1 1 EKPAQDPLY(1)DVPNASGGQAGGPQRPGR 114.91 0.00096038 1059600000.0 343780.0 340420.0 344300.0 326220.0 357540.0 360800.0 352840.0 394130.0 468560.0 315770.0 True False 324709.8380915606 324065.7122191629 366494.12889947795 357223.8507183804 385676.3638756782 358548.1133680354 388508.5105865543 392762.85502063355 383481.315436382 312972.52346534276 1.0375026999055958 1.0354446091017588 1.1710105565866453 1.1413904542260491 1.2323010327083437 1.145621696748531 1.2413502191337766 1.2549435671599025 1.225287482716824 1.0 18.255676479836584 -4.795444672518079 3.6362936154944436 1.189547849146583 1.0320106998160423 0.37471475176505853 0.07098716128069764 0.1979931937596814 5.416385732248852 0.01808736685325239 0.04651581161954766 1.601604673753604e-05 4.795444672518079 -0.15753714933054064 EKPCVS(ph)PTVGEK ddPTM_KYSE-520_SHP099_60min_R1 8 EKPCVSPTVGEK 12 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 EKPCVS(0.636)PT(0.364)VGEK;EKPCVS(0.987)PT(0.013)VGEK;EKPCVS(0.977)PT(0.023)VGEK;EKPCVS(0.987)PT(0.013)VGEK;EKPCVS(0.652)PT(0.348)VGEK;EKPCVS(0.981)PT(0.019)VGEK;EKPCVS(0.5)PT(0.5)VGEK;EKPCVS(0.924)PT(0.076)VGEK 235.71 5.0845e-15 13937430000.0 12435060.0 11342200.0 10638220.0 10612730.0 10850970.0 10997690.0 11036910.0 11839330.0 13627310.0 11599780.0 True False 11745262.433122443 10797303.687010711 11323976.68295381 11621360.668366374 11704879.605426153 10929049.337324033 12152628.572661413 11798262.127550395 11152934.020529624 11497014.97369229 1.021592340272514 0.9391397429434793 0.9849492854332685 1.0108154764483315 1.0180798783170677 0.9505988608636339 1.0570246799251206 1.0262022059245313 0.9700721488186281 1.0 23.45475600001951 -5.142703588167779 4.9924962164476545 1.0061730787112264 0.9764186516822345 0.08609419756184122 0.03321101366121685 0.4671483872463473 17.13660445933264 0.008947374460448677 0.01596196215912361 7.199401792261294e-06 5.142703588167779 -0.029754427028991892 EKPCVSPT(ph)VGEK ddPTM_KYSE-520_SHP099_60min_R1 3 EKPCVSPTVGEK 12 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 EKPCVS(0.048)PT(0.952)VGEK;EKPCVS(0.164)PT(0.836)VGEK;EKPCVS(0.148)PT(0.852)VGEK 196.18 1.791e-07 3344330000.0 2210900.0 1930440.0 1779140.0 1737230.0 1850080.0 1879170.0 1862730.0 2037400.0 2379160.0 1886330.0 True False 2088256.9696801181 1837698.7647504865 1893826.2111246472 1902335.816882753 1995670.7704847434 1867441.4029872802 2051032.926892907 2030332.7349327332 1947164.517742916 1869618.5837425338 1.1169427753012178 0.9829270957886226 1.0129478962140264 1.0174994158833868 1.067421338147957 0.9988354946970545 1.097032809112982 1.0859609294578618 1.0414768737723785 1.0 20.83431254881212 -6.759202411533372 24.999996621453892 1.0632810596979025 1.0304780855551217 0.054210572747058317 0.04325797831063539 132.48772771736634 1480676.8198350049 0.01648580983691952 0.012144301647268159 1.7409952589955513e-07 6.759202411533372 -0.03280297414278088 EKPDS(ph)DDDLDIASLVTAK ddPTM_KYSE-520_SHP099_60min_R1 7 EKPDSDDDLDIASLVTAK 18 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK;EKPDS(1)DDDLDIASLVTAK 285.13 5.846900000000001e-38 205695100000.0 17444400.0 15296100.0 15205800.0 14448030.0 15519670.0 14568080.0 14378510.0 14366300.0 18350300.0 14422790.0 True False 16476724.357450737 14561252.396085817 16185990.19814022 15821166.427241398 16740979.734156877 14477155.208965097 15832030.111534622 14316466.658419628 15018348.093418641 14295015.301360834 1.1526202672817154 1.018624470776162 1.1322821177112956 1.1067610697650165 1.1711061080545464 1.012741497911298 1.1075210328755276 1.0015006179851205 1.0506003510180886 1.0 23.76900882843977 -7.007100740987765 1.0816184987296573 1.0141403777123434 1.1070546830933017 0.35866179791296227 0.05019416168763553 0.6055819202204656 1.3182909072380646 0.03862135674500047 0.01788848766878559 9.837828763950566e-08 7.007100740987765 0.09291430538095824 EKPELSEPSHLNGPS(ph)S(ph)DPEAAFLSR ddPTM_KYSE-520_SHP099_60min_R1 4 EKPELSEPSHLNGPSSDPEAAFLSR 25 1 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;Q9H4A3-4 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 2 EKPELSEPSHLNGPS(1)S(1)DPEAAFLSR;EKPELSEPS(0.002)HLNGPS(0.999)S(0.999)DPEAAFLSR;EKPELSEPSHLNGPS(1)S(1)DPEAAFLSR;EKPELSEPS(0.001)HLNGPS(0.989)S(0.99)DPEAAFLS(0.02)R 110.47 0.00025678 5159020000.0 1574130.0 1563030.0 1478330.0 1989630.0 1502900.0 1468830.0 1508650.0 1521840.0 1760070.0 1584740.0 True False 1486809.8709496418 1487939.6926441384 1573625.5172116326 2178723.8369959258 1621169.679668728 1459662.487135176 1661159.065005117 1516561.0922401263 1440485.6557540395 1570700.4365090649 0.9465903468226744 0.9473096575634339 1.0018622778949937 1.3871033497884635 1.0321316795911974 0.9293067304287033 1.0575912671782912 0.9655317188366834 0.917097635087928 1.0 20.58297662584891 -6.003820106897328 24.99955095937667 0.9773968432422827 1.0760627034723387 0.12308001608237529 0.12191140543099409 383.2960086866616 2508393.0721108494 0.041279484316997295 0.04581193084226326 9.912424514990613e-07 6.003820106897328 0.09866586023005597 EKPELSEPSHLNGPS(ph)SDPEAAFLSR ddPTM_KYSE-520_SHP099_60min_R1 9 EKPELSEPSHLNGPSSDPEAAFLSR 25 1 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;Q9H4A3-4 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 1 EKPELSEPSHLNGPS(0.59)S(0.41)DPEAAFLSR;EKPELSEPSHLNGPS(0.5)S(0.5)DPEAAFLSR;EKPELSEPSHLNGPS(0.5)S(0.5)DPEAAFLSR;EKPELSEPSHLNGPS(0.5)S(0.5)DPEAAFLSR;EKPELSEPSHLNGPS(0.5)S(0.5)DPEAAFLSR;EKPELSEPSHLNGPS(0.793)S(0.207)DPEAAFLSR;EKPELSEPSHLNGPS(0.5)S(0.5)DPEAAFLSR;EKPELSEPSHLNGPS(0.5)S(0.5)DPEAAFLSR;EKPELSEPSHLNGPS(0.496)S(0.496)DPEAAFLS(0.007)R 165.4 2.2002e-10 10209360000.0 2194882.0 2740781.0 2335346.0 4188230.0 2214831.0 2093235.0 2215944.0 2067286.0 2691554.0 2027961.0 True False 2073127.5200712082 2609109.766763845 2485886.139845717 4586278.119962738 2389125.5990354433 2080170.343918899 2439953.2450493462 2060115.0673741803 2202835.6421548016 2009994.8432697859 1.0314093725229267 1.298067890820775 1.2367624465154194 2.2817362618214228 1.188622750468803 1.0349132739738547 1.2139102014212733 1.0249354988507635 1.0959409421027715 1.0 20.938760369435517 -5.98214494651824 24.99997343137384 1.0873042717723163 1.4718197385770408 0.25832435457440994 0.3107616562856309 356.36511333973294 498966.5256272277 0.09991006708324157 0.11326728793797257 1.041969612232967e-06 5.98214494651824 0.3845154668047246 EKPELSEPSHLNGPSS(ph)DPEAAFLSR ddPTM_KYSE-520_SHP099_60min_R1 6 EKPELSEPSHLNGPSSDPEAAFLSR 25 1 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;Q9H4A3-4 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 1 EKPELSEPSHLNGPS(0.191)S(0.808)DPEAAFLSR;EKPELSEPSHLNGPS(0.294)S(0.705)DPEAAFLS(0.001)R;EKPELSEPSHLNGPS(0.009)S(0.991)DPEAAFLSR;EKPELSEPSHLNGPS(0.018)S(0.982)DPEAAFLSR;EKPELSEPSHLNGPS(0.109)S(0.891)DPEAAFLSR;EKPELSEPSHLNGPS(0.17)S(0.83)DPEAAFLSR 238.42 8.937499999999999e-29 4467330000.0 1923181.0 2254806.0 2172417.0 3869799.0 2019559.0 1925797.0 1900108.0 1985729.0 2557902.0 1937392.0 True False 1816498.3161637243 2146481.7352271946 2312454.475810099 4237583.533462508 2178486.8035811433 1913777.3865848733 2092189.4599070332 1978840.969571634 2093451.4762620593 1920228.2141481661 0.9459804323151988 1.117826370538669 1.204260232597368 2.206812451895123 1.1344936958691358 0.9966405932816926 1.0895525044845522 1.0305238486715336 1.0902097265510375 1.0 20.87284635102799 -5.981753311606561 24.99993931098974 1.0484436342279615 1.380501814405245 0.1964989361711793 0.31312032675310936 425.81860316913304 583414.687376036 0.1031555023938726 0.11694879033714042 1.042909655782541e-06 5.981753311606561 0.3320581801772835 EKPHAGVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 EKPHAGVSPR 10 1 A0A087WWP8;Q5VWQ0;A0A0C4DH79;Q5VWQ0-4 A0A087WWP8 RSBN1 Round spermatid basic protein 1 1 EKPHAGVS(1)PR;EKPHAGVS(1)PR;EKPHAGVS(1)PR;EKPHAGVS(1)PR 124.09 0.00029988 5027350000.0 6690720.0 5781910.0 5285420.0 5643980.0 5848310.0 5754700.0 5903960.0 5761810.0 6791130.0 5532030.0 True False 6319572.423980344 5504138.364776159 5626126.630170999 6180382.162275534 6308538.724667914 5718782.782702421 6500789.893896934 5741823.625926563 5558031.982455761 5483020.518054218 1.1525713615645918 1.0038514987591975 1.026099868064613 1.1271856710959003 1.15055902196526 1.0429986106876485 1.1856220257596073 1.0472008279050151 1.0136806827832485 1.0 22.38653944168945 -7.515194872303674 21.38978736231843 1.0147068367363146 1.0946493427344177 0.3018029446790238 0.05625292466429149 75.51863477950245 210248.42503198358 0.03560012277978066 0.014825098800300213 3.053550646869009e-08 7.515194872303674 0.07994250599810315 EKPKEEEWEKPK ddPTM_KYSE-520_SHP099_60min_R1 2 EKPKEEEWEKPK 12 3 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 0 ; 130.07 3.5043e-05 7413600000.0 5479700.0 4342300.0 3636900.0 3323100.0 4828800.0 4816200.0 3869900.0 4324000.0 3831200.0 2984200.0 False True 5175730.117488873 4133689.390074823 3871340.393245744 3638926.424873555 5208799.087886322 4786140.309321322 4261107.258584368 4309001.053229185 3135550.6566925617 2957762.309672465 1.7498803404733425 1.3975732182930471 1.3088747464884851 1.23029711108751 1.7610607420523696 1.6181625865167395 1.4406523623110987 1.4568449395470024 1.0601090717934614 1.0 21.496074689227346 -7.775629093704708 3.8660193360448183 1.0003104130999434 1.4915710750167415 0.5653496682616429 0.16387317718245648 0.16825912339908536 5.1474285024460364 0.15725995324647973 0.044625799337346506 1.6763739607955698e-08 7.775629093704708 0.49126066191679807 EKPKEVAENQQNQS(ph)SDPEEEKGSQPPPAAESQSSLR ddPTM_KYSE-520_SHP099_60min_R1 1 EKPKEVAENQQNQSSDPEEEKGSQPPPAAESQSSLR 36 3 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3;E9PQN0;E9PRG1;E9PIG0;E9PQD2;E9PJP4 O43491 EPB41L2 Band 4.1-like protein 2 1 EKPKEVAENQQNQS(0.499)S(0.499)DPEEEKGS(0.002)QPPPAAESQSSLR 98.979 0.00054127 856930000.0 234920.0 314240.0 341000.0 227030.0 250730.0 207540.0 149890.0 182310.0 373430.0 169670.0 True False 221888.5192985905 299143.4387161439 362981.40561929066 248606.86294094162 270461.0245414465 206244.66587694568 165042.34398542874 181677.60916147396 305624.5254042341 168166.85580126263 1.3194545277151128 1.7788489728895667 2.158459845668146 1.4783344896139459 1.6082897147168747 1.2264287447978626 0.9814201686714866 1.0803413567782831 1.817388592704719 1.0 17.359533865624435 -6.079863774865068 2.1012774170569846 1.208602264676454 1.729670526200412 0.35616436693518516 0.2998387729919932 0.3569502812116926 3.1261377105065047 0.11392782066076418 0.11831223054187286 8.320247113380474e-07 6.079863774865068 0.5210682615239579 EKPQQS(ph)PAIEHGR ddPTM_KYSE-520_SHP099_60min_R1 1 EKPQQSPAIEHGR 13 1 A0A0S2Z4A4;P58340;C9JNE5;A0A499FJ64;C9K0D4;A0A494C1P6;P58340-2;P58340-5;P58340-4;P58340-3 A0A0S2Z4A4 MLF1 Myeloid leukemia factor 1 1 EKPQQS(1)PAIEHGR 73.918 0.011895999999999999 464030000.0 189830.0 159060.0 160690.0 152600.0 141340.0 138190.0 149380.0 143090.0 185290.0 139290.0 True False 179299.7514832769 151418.51884607266 171048.33451309067 167103.0581191369 152462.65388540685 137327.50495102227 164480.7882083082 142593.6541874569 151646.00678079057 138055.99896598008 1.2987465436214776 1.0967905775929765 1.2389779205121003 1.2104005575325607 1.104353704491877 0.9947231991335826 1.191406309325535 1.0328682219929828 1.098438372230093 1.0 17.074894053347442 -1.0000000000000002 0.15150379250858184 0.9814988047168992 1.9745072598198676 0.4952624258672721 0.07028305168883225 60.751236672454496 0.6031905328762339 0.24323851065838284 13.291062193974357 0.09999999999999995 1.0000000000000002 0.9930084551029684 EKPYFPIPEEYTFIQNVPLEDR ddPTM_KYSE-520_SHP099_60min_R1 1 EKPYFPIPEEYTFIQNVPLEDR 22 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;Q5RI18;A0A1W2PP35;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 133.58 6.0763e-06 575690000.0 228650.0 241140.0 166750.0 130100.0 249650.0 233870.0 195350.0 181170.0 198910.0 214320.0 False True 215966.32869752555 229555.27244148066 177498.97180943354 142464.66488400864 269296.03468580625 232410.33058032836 215097.88443227336 180541.5635553957 162792.9581130498 212421.29153843678 1.0166887091845371 1.0806603743859808 0.835598778841413 0.6706703638426482 1.2677450209226235 1.0941009203791356 1.0126003983614433 0.8499221629237078 0.7663683660618035 1.0 17.696568852902004 -7.264331645379968 23.534662082506024 0.8561089270103818 0.995498815635657 0.1125140767196573 0.1586543956288948 254.24473992866595 2068757.0900468251 0.08732254856439914 0.04491201190050019 5.440870066291447e-08 7.264331645379968 0.13938988862527524 EKQEASES(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 3 EKQEASESPVK 11 1 E9PPI7;Q01167-3;Q01167-2;Q01167 E9PPI7 FOXK2 Forkhead box protein K2 1 EKQEAS(0.023)ES(0.977)PVK;EKQEAS(0.015)ES(0.985)PVK;EKQEASES(1)PVK 162.67 3.0296e-05 3169640000.0 867280.0 776900.0 745690.0 799080.0 798300.0 783580.0 815770.0 836550.0 935840.0 782840.0 True False 819170.2495201825 739576.5578493251 793758.3705461847 875024.3229478376 861121.668294327 778689.3865657577 898235.9927479692 833648.203302237 765915.0466065891 775904.6466403034 1.0557614947496716 0.9531796994021362 1.0230102036161126 1.1277472389638679 1.1098292451566265 1.0035890233903255 1.1576628605555659 1.0744209445219401 0.9871252220527745 1.0 19.565519840416524 -5.0138750955026925 24.30137170881351 1.0722070481299362 1.0003766806165921 0.15499787736298498 0.05853544280288606 645.985755863614 1131412.1097928884 0.015370950537820746 0.028133139460577685 9.68556376153374e-06 5.0138750955026925 -0.07183036751334404 EKQEEEVDYES(ph)EEEEEREGEENDDEDMQEER ddPTM_KYSE-520_SHP099_60min_R1 3 EKQEEEVDYESEEEEEREGEENDDEDMQEER 31 2 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 EKQEEEVDY(0.045)ES(0.955)EEEEEREGEENDDEDMQEER;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEER;EKQEEEVDYES(1)EEEEEREGEENDDEDMQEER 142.6 1.2212999999999999e-06 3444910000.0 541468.0 504633.0 524637.0 516166.0 491789.0 430827.0 484834.0 484383.0 626212.0 447751.0 True False 511431.6906503025 480389.673210425 558455.9404688792 565222.2614490333 530489.9964033556 428138.0488858382 533845.7522438539 482702.7884288423 512507.68631988927 443784.2744850069 1.1524331078287926 1.0824846684076337 1.258395063946202 1.2736419335834963 1.19537808548752 0.9647436231999759 1.2029397681190022 1.0876969198356536 1.154857699531226 1.0 18.75949902091619 EKQELQDDKRR ddPTM_KYSE-520_SHP099_60min_R1 2 EKQELQDDKRR 11 3 P12270 P12270 TPR Nucleoprotein TPR 0 ; 188.91 4.4235e-07 2674400000.0 2100450.0 2240300.0 1893990.0 1200010.0 1994470.0 1723060.0 1178560.0 1463610.0 2139370.0 1057530.0 False True 1983933.8513567348 2132672.625241143 2016079.6258911442 1314058.5896038387 2151423.442018023 1712305.7434033467 1297700.346437167 1458533.0785191418 1750914.3371289284 1048161.1069458914 1.892775679434889 2.034680175698636 1.9234444137748559 1.2536799742863132 2.052569426361176 1.633628391719881 1.2380733628042901 1.3915161217620287 1.6704629903991608 1.0 19.999429051780034 -1.0000001795732119 0.06593194687682012 0.23232515572758797 4.721876888096706 0.5257120041026309 0.24287911848337704 226.72081565286388 1.1117393846194734 14.048555159814178 95.61943094790425 0.09999995865174847 1.0000001795732119 4.489551732369119 EKQLAAENR ddPTM_KYSE-520_SHP099_60min_R1 1 EKQLAAENR 9 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 83.869 0.0069327 406200000.0 449840.0 502130.0 431340.0 277800.0 466300.0 389440.0 279610.0 334140.0 437180.0 420610.0 False True 424886.4784661919 478006.9210875035 459144.8665684012 304202.0284763844 502995.1571159277 387009.3605045669 307875.7075306272 332980.94632886245 357799.1324109554 416883.72262962867 1.0191966138329491 1.1466192972762776 1.1013739362913877 0.729704740107222 1.2065598386598626 0.9283388616455938 0.738516979239683 0.7987381810651604 0.8582708150704994 1.0 18.669285517151682 -6.520855330515851 24.808012032555112 0.8322979624687535 1.036148001274428 0.31281374654603256 0.1335713443142058 84.10929105382434 1031249.7412038969 0.04984468675933029 0.03923616659357991 3.014009865252439e-07 6.520855330515851 0.20385003880567443 EKQS(ph)DDEVYAPGLDIESSLK ddPTM_KYSE-520_SHP099_60min_R1 12 EKQSDDEVYAPGLDIESSLK 20 1 Q15459;Q15459-2 Q15459 SF3A1 Splicing factor 3A subunit 1 1 EKQS(1)DDEVYAPGLDIESSLK;EKQS(1)DDEVYAPGLDIESSLK;EKQS(1)DDEVYAPGLDIESSLK;EKQS(1)DDEVYAPGLDIESSLK;EKQS(1)DDEVYAPGLDIESSLK;EKQS(1)DDEVYAPGLDIESSLK;EKQS(1)DDEVYAPGLDIESSLK;EKQS(1)DDEVYAPGLDIESSLK;EKQS(1)DDEVYAPGLDIESSLK;EKQS(1)DDEVYAPGLDIESSLK;EKQS(1)DDEVYAPGLDIESSLK;EKQS(1)DDEVYAPGLDIESSLK 305.81 3.8176999999999994e-46 13798590000.0 13156245.0 12641956.0 12836300.0 12653216.0 13536646.0 13372717.0 12448556.0 13265040.0 16756490.0 12988540.0 True False 12426441.863525804 12034617.457797183 13663748.43680618 13855773.844311878 14601903.027220016 13289252.912845485 13706977.5266787 13219026.672323607 13713933.812738135 12873471.640531197 0.9652751185159758 0.9348385419133606 1.0613880092598218 1.0763043747024674 1.1342630360288344 1.0322975250130066 1.0647460070928552 1.0268424121667736 1.0652863653003128 1.0 23.61789782757464 -4.766208588695871 24.99937625178783 1.0613513171738498 0.9500568134771324 0.608803357375355 0.034393152567218616 66.32576990007051 347675.42370472045 0.008996455538701422 0.019747075288480794 1.7131343030889222e-05 4.766208588695871 -0.11129450369671734 EKQS(ph)S(ph)EEEEKETR ddPTM_KYSE-520_SHP099_60min_R1 1 EKQSSEEEEKETR 13 2 A2AAT0;Q92504 A2AAT0 SLC39A7 Zinc transporter SLC39A7 2 EKQS(1)S(1)EEEEKETR 83.42299999999999 0.004257 3065000000.0 6907600.0 7409500.0 5989100.0 9109200.0 7791400.0 7555500.0 7704400.0 8542900.0 11771000.0 6415400.0 True False 6524421.658040788 7053536.498113752 6375166.968898822 9974935.62921916 8404538.852998152 7508343.321929575 8483235.939698018 8513266.673827847 9633683.122762607 6358564.547105673 1.0260840492703045 1.109296987686383 1.0026110329886808 1.5687401701001222 1.3217666960420773 1.1808236381507309 1.334143245201382 1.3388661246983746 1.5150720027128957 1.0 22.600269681608836 -5.2331044320861055 24.97828079052048 1.3314098308690334 1.052327268377616 0.41151991835978297 0.15136982116054765 688.8950139068512 607285.0653404122 0.03959761605320718 0.06856826376174317 5.846494802250414e-06 5.2331044320861055 -0.2790825624914175 EKQSDS(ph)KGKDQER ddPTM_KYSE-520_SHP099_60min_R1 8 EKQSDSKGKDQER 13 3 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 EKQS(0.029)DS(0.971)KGKDQER;EKQS(0.005)DS(0.995)KGKDQER;EKQS(0.003)DS(0.997)KGKDQER;EKQS(0.285)DS(0.715)KGKDQER;EKQS(0.003)DS(0.997)KGKDQER;EKQSDS(1)KGKDQER;EKQS(0.014)DS(0.986)KGKDQER;EKQS(0.034)DS(0.966)KGKDQER 124.25 9.821399999999999e-05 7975450000.0 6266460.0 6044080.0 3399180.0 3371960.0 5667320.0 8381290.0 4053860.0 3681520.0 5429720.0 19562380.0 True False 5918846.97192169 5753713.324450965 3618296.581680296 3692430.064583256 6113305.841360147 8328979.26022833 4463663.730660951 3668749.666393225 4443819.720102503 19389072.532501332 0.30526715303169355 0.2967503120536676 0.18661524813087638 0.19043871533275994 0.3152964553158792 0.4295707928404882 0.23021543310948175 0.18921738831207155 0.2291919694793786 1.0 24.208740458643195 -10.756856538993436 2.5592454066591523 1.1757598547854033 0.26340572214246133 0.903433753242356 0.07222518427329729 8079026.99104432 5966953.178480364 8955433.712631315 0.02094037936809476 1.750424813018625e-11 10.756856538993436 -0.9123541326429421 EKRDS(ph)LGNEESVDK ddPTM_KYSE-520_SHP099_60min_R1 2 EKRDSLGNEESVDK 14 2 Q9UPZ3-2;Q9UPZ3 Q9UPZ3-2 HPS5 Hermansky-Pudlak syndrome 5 protein 1 EKRDS(1)LGNEESVDK;EKRDS(1)LGNEESVDK 137.61 5.1248000000000005e-06 596630000.0 435090.0 400220.0 360400.0 357400.0 461830.0 407620.0 386710.0 370660.0 491410.0 429780.0 True False 410954.69036958826 380992.83045753243 383631.9606603884 391367.188543772 498173.3935467492 405075.8923810382 425802.42072589934 369374.26697269396 402182.3314380064 425972.4835637804 0.9647446871015003 0.8944071393298971 0.9006026808371241 0.9187616657055103 1.1694966524103152 0.9509438003884274 0.9996007656728007 0.867131754338747 0.9441509650418256 1.0 18.700400714493032 -5.578659403589033 24.99999702091992 0.9863592676258874 0.9160798178642906 0.1728139959537579 0.07364049335534519 162.5026972819175 72830.00613848686 0.022840581689194592 0.029487068158358134 2.638399745515554e-06 5.578659403589033 -0.07027944976159683 EKRES(ph)VAS(ph)GDDR ddPTM_KYSE-520_SHP099_60min_R1 2 EKRESVASGDDR 12 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 EKRES(1)VAS(1)GDDR;EKRES(1)VAS(1)GDDR 68.41 0.020453 3704000000.0 2826300.0 2387000.0 2135480.0 2726300.0 2459020.0 2404500.0 2904600.0 2998400.0 2894800.0 2661900.0 True False 2669519.504910631 2272324.9370399546 2273136.4576888103 2985406.732308013 2652530.8840900883 2389492.6235960107 3198225.3141642287 2987999.2502318216 2369177.29196952 2638317.6369268615 1.0118264258810452 0.861277999750925 0.8615855899506407 1.1315569780238608 1.0053872388086609 0.9056879998646847 1.2122214813715733 1.1325396185852257 0.89798789152968 1.0 21.33118683582139 -5.251125306672498 24.968363525377296 1.0463324995490555 0.9065348009998718 0.25238770346655015 0.10147866419209699 944.8307002332567 2287247.0418653223 0.028117521670894374 0.0480162947041263 5.60886120617198e-06 5.251125306672498 -0.13979769854918367 EKRES(ph)VAS(ph)GDDRAEEDMDEAIEK ddPTM_KYSE-520_SHP099_60min_R1 6 EKRESVASGDDRAEEDMDEAIEK 23 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 EKRES(1)VAS(1)GDDRAEEDMDEAIEK;EKRES(1)VAS(1)GDDRAEEDMDEAIEK;EKRES(1)VAS(1)GDDRAEEDMDEAIEK;EKRES(1)VAS(1)GDDRAEEDMDEAIEK;EKRES(1)VAS(1)GDDRAEEDMDEAIEK;EKRES(1)VAS(1)GDDRAEEDMDEAIEK 157.43 1.4014e-07 7366560000.0 10969130.0 9446790.0 8676000.0 11497470.0 10262170.0 9828870.0 10827500.0 12166090.0 12836680.0 10712580.0 True False 10360650.492481457 8992952.028479127 9235268.842090812 12590186.091959588 11069744.395239897 9767524.376495807 11922049.366216742 12123888.673376745 10505862.49836924 10617674.875461128 0.9757927808117681 0.8469794125324978 0.8698014349106468 1.1857761929645443 1.0425770731427804 0.919930633689855 1.122849353182795 1.1418590996223363 0.9894692219903718 1.0 23.33996453459997 -5.236357977592228 24.97406196682804 1.0597750435642896 0.8924700009510677 0.45402788010200257 0.08030354885167548 680.1334741892794 677221.913953372 0.02208393419661751 0.03823044209488046 5.802859058282154e-06 5.236357977592228 -0.167305042613222 EKRES(ph)VASGDDRAEEDMDEAIEK ddPTM_KYSE-520_SHP099_60min_R1 1 EKRESVASGDDRAEEDMDEAIEK 23 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EKRES(0.999)VAS(0.001)GDDRAEEDMDEAIEK 196.01 4.1457e-15 1020600000.0 448750.0 391670.0 321660.0 433370.0 400550.0 404930.0 421720.0 525540.0 569260.0 375630.0 True False 423856.9429390535 372853.585291344 342394.71827419713 474557.3545025586 432071.0061822535 402402.6816688428 464351.57319057226 523717.024401958 465896.7338768031 372302.21043571795 1.1384754939891422 1.0014809873274206 0.9196687762704415 1.2746562905097125 1.16053838540627 1.0808495635787314 1.2472436643530154 1.4066986703867113 1.2513939504456562 1.0 18.50611465623242 -5.26836235399053 24.971206361591413 1.2149779962659317 1.0180356742374177 0.3408707809355891 0.11589263558928253 569.6202279477036 2054623.0890580704 0.033721119211420354 0.051279938987693625 5.3906066907893034e-06 5.26836235399053 -0.19694232202851403 EKS(ph)AIYQLEEEYENLLK ddPTM_KYSE-520_SHP099_60min_R1 1 EKSAIYQLEEEYENLLK 17 1 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 EKS(1)AIYQLEEEYENLLK 130.87 2.359e-05 17122000.0 42627.0 41949.0 37301.0 46282.0 39362.0 40074.0 40277.0 46148.0 54367.0 42765.0 True False 40262.395335182206 39933.7070732673 39705.482143710185 50680.62736480933 42459.565460856 39823.88330130448 44348.59222563951 45987.92335902417 44495.323280539866 42386.135370666554 0.9498954076159043 0.942140790238299 0.9367563661203346 1.1956888006327417 1.0017324082402725 0.939549759680726 1.046299499537084 1.0849756165986826 1.049761269609236 1.0 15.371304811718735 EKS(ph)KNHSR ddPTM_KYSE-520_SHP099_60min_R1 2 EKSKNHSR 8 2 H7C118 H7C118 PPP1R7 1 EKS(1)KNHSR;EKS(1)KNHSR 52.725 0.047205000000000004 4014300000.0 2503500.0 2315800.0 2157980.0 1826710.0 2282210.0 2024280.0 1726620.0 2017550.0 2819400.0 1941960.0 True False 2364625.864396481 2204545.491913335 2297086.84369008 2000319.96917961 2461806.943001375 2011645.717651459 1901163.5997873177 2010551.5899497082 2307468.031290198 1924755.7452220179 1.2285329555536537 1.1453637675252366 1.1934432976196232 1.0392591237330615 1.279023039215508 1.045143376059604 0.987742784769826 1.0445749259045822 1.198836806705588 1.0 20.8762439462927 -6.310465450085121 24.88164760237456 1.0538256498680738 1.168607458030025 0.37171419188181254 0.07881883995622736 423.72280458567093 215045.91729610285 0.027237681512955796 0.024021400563021836 4.892541857719477e-07 6.310465450085121 0.11478180816195116 EKS(ph)KS(ph)PS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 3 EKSKSPSPPR 10 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 3 EKS(1)KS(1)PS(1)PPR;EKS(1)KS(1)PS(1)PPR;EKS(1)KS(1)PS(1)PPR 93.23700000000001 0.0015413 1940580000.0 3143770.0 2818970.0 2564850.0 2591120.0 2838360.0 2826200.0 2642760.0 2895780.0 3253410.0 2790700.0 True False 2969378.8111498756 2683542.4498397657 2730184.3349050973 2837379.265751364 3061722.7839407334 2808560.637474337 2909915.9716520873 2885735.2150601298 2662672.7557919575 2765976.569131748 1.0735372252563862 0.9701971013739069 0.9870598201640277 1.0258146426171753 1.1069228923012249 1.0153956721173372 1.0520392703707981 1.0432970572726055 0.9626519564581063 1.0 21.399357504648226 -3.9305464848360128 15.990978653558958 1.0224821107503674 1.7322338237939756 0.1352533887606452 0.040708733982023695 5558795.43689459 24205523.139392503 0.010537021796096339 132270721.66576359 0.00011734200784104585 3.9305464848360128 0.7097517130436082 EKS(ph)PPDQPAVPHPPPSTPIK ddPTM_KYSE-520_SHP099_60min_R1 4 EKSPPDQPAVPHPPPSTPIK 20 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;H0YG19 P35611 ADD1 Alpha-adducin 1 EKS(1)PPDQPAVPHPPPSTPIK;EKS(1)PPDQPAVPHPPPSTPIK;EKS(1)PPDQPAVPHPPPSTPIK;EKS(1)PPDQPAVPHPPPSTPIK 159.76 6.2061999999999995e-09 8615000000.0 5954870.0 4951120.0 4483030.0 5897470.0 4835730.0 5093060.0 4900710.0 5242250.0 5373580.0 4841940.0 True False 5624541.490360961 4713260.763417365 4772013.286901612 6457963.775660982 5216274.439460011 5061272.323365315 5396121.593120487 5224065.85830035 4397873.328928268 4799044.178572318 1.172012859451155 0.9821248957161147 0.9943674426271385 1.3456770838859378 1.0869402833903097 1.054641744279797 1.1244159029029392 1.088563818942478 0.9164060936477156 1.0 22.194315663460554 -7.695152075673933 6.5939427334606675 0.9590561462405554 1.1052363448280016 0.2664080009390185 0.09830812079156906 0.2683415212837806 20.52875485246866 0.07089107901930361 0.02573724471701015 2.0176597217528027e-08 7.695152075673933 0.14618019858744624 EKS(ph)PSLGK ddPTM_KYSE-520_SHP099_60min_R1 6 EKSPSLGK 8 1 O76021-2;O76021 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 EKS(0.998)PS(0.002)LGK;EKS(0.816)PS(0.184)LGK;EKS(0.955)PS(0.045)LGK;EKS(0.76)PS(0.24)LGK;EKS(0.811)PS(0.189)LGK;EKS(0.985)PS(0.015)LGK 117.86 0.0015335000000000001 12539900000.0 30703550.0 26084820.0 24971540.0 25376340.0 25186030.0 26419000.0 25956190.0 27661800.0 29503410.0 26756870.0 True False 29000362.8754905 24831666.09308694 26581245.42427669 27788099.723925196 27168027.272091966 26254109.221369524 28580094.99320264 27565847.672112644 24146334.46444189 26519824.948329873 1.093535230039927 0.9363435143884972 1.002316021167805 1.0478236480846452 1.0244421795779204 0.9899804871458217 1.0776879202214538 1.0394430478263261 0.9105012763654212 1.0 24.660567916773278 -7.745698383553347 24.999561575347794 0.9552506148736511 1.0237770031576952 0.2693155461291843 0.04674304031364161 279.84832165415935 444454.29335228656 0.0310576007703991 0.011651135296395254 1.7959804978346067e-08 7.745698383553347 0.068526388284044 EKS(ph)PSLGKK ddPTM_KYSE-520_SHP099_60min_R1 2 EKSPSLGKK 9 2 O76021-2;O76021 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 EKS(0.871)PS(0.129)LGKK;EKS(0.958)PS(0.042)LGKK 130.56 0.0044985 14688200000.0 18809500.0 16110900.0 17425400.0 14634000.0 15413500.0 14971900.0 12685000.0 13616500.0 19073300.0 14776900.0 True False 17766099.539191343 15336908.181046082 18548669.165625803 16024810.960127473 16626454.759181557 14878454.818555696 13967323.593669778 13569267.539614987 15610069.518765444 14645988.162254237 1.2130352245523648 1.0471746946083496 1.2664675787072932 1.0941433778723617 1.1352224633112429 1.0158723777273406 0.9536620840419959 0.9264835796184662 1.0658256271840945 1.0 23.804002199094207 -6.27770849179722 2.423995053704843 0.9794604397090189 1.1536590951631496 0.5999835293995828 0.06522807230812783 0.20030396787145746 2.3205094041972556 0.024073883152404354 0.022009695696478485 5.275838687335455e-07 6.27770849179722 0.1741986554541307 EKS(ph)RS(ph)PS(ph)KEK ddPTM_KYSE-520_SHP099_60min_R1 2 EKSRSPSKEK 10 3 Q08170;A0A0D9SEM4 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 3 EKS(1)RS(1)PS(1)KEK;EKS(1)RS(1)PS(1)KEK 49.148999999999994 0.053501 1169280000.0 1954310.0 1257350.0 1362820.0 1810760.0 1632090.0 1746470.0 1501290.0 1684560.0 1642390.0 1212620.0 True False 1845900.528479601 1196945.0186791725 1450669.5577890982 1982854.0859751538 1760526.1976781806 1735569.6329098467 1653055.0443784387 1678716.6545392603 1344173.3772826507 1201877.1302040839 1.535847951584002 0.9958963263373903 1.2070032130012893 1.6497976674524597 1.4648137928868283 1.4440491372151658 1.3753943750454283 1.396745650908764 1.1183950035345163 1.0 20.196857983920772 -7.883334639599088 3.5168838843897383 1.003698137736396 1.3787608622351644 0.37728571234665687 0.1695265777071624 0.24928184236431683 5.616088900769706 0.17233641596948998 0.04604777717311365 1.3081735395455317e-08 7.883334639599088 0.3750627244987683 EKSAT(ph)RPS(ph)PS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 EKSATRPSPSPER 13 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 EKS(0.112)AT(0.898)RPS(0.99)PS(1)PER 128.96 6.828e-05 372110000.0 620830.0 562090.0 501080.0 569650.0 570930.0 528990.0 514850.0 601520.0 692270.0 547530.0 True False 586391.3223060772 535086.3526857088 533380.418556347 623789.3647284826 615858.9428526631 525688.3771911225 566896.0624517839 599433.4675158233 566571.2187065562 542679.3101718939 1.080548514223506 0.986008389588724 0.9828648495690734 1.1494622202031195 1.1348487611543354 0.9686906564110772 1.0446244251917756 1.1045813914039813 1.0440258327281624 1.0 19.049740380940225 -5.174741992803632 24.994039664035014 1.0663262340390036 1.0134274373390273 0.1190953105742919 0.058448089262736425 161.08891552550966 46436.57517228697 0.016375581518742563 0.02836333875054894 6.687410876429867e-06 5.174741992803632 -0.052898796699976325 EKSKS(ph)PS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 3 EKSKSPSPPR 10 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 EKS(0.119)KS(0.881)PS(1)PPR;EKS(0.088)KS(0.912)PS(1)PPR;EKS(0.068)KS(0.933)PS(0.999)PPR 73.877 0.014687 1520340000.0 3150770.0 2956110.0 3069480.0 2443740.0 2641520.0 2873780.0 2338940.0 2472380.0 3820790.0 2551020.0 True False 2975990.507195719 2814094.03838843 3267343.592141647 2675992.3148627775 2849392.595807134 2855843.6730454345 2575382.881054632 2463803.8908378286 3127030.850277818 2528419.94746353 1.1770159107395053 1.1129852227322774 1.292247197867345 1.0583654497534278 1.1269459405529523 1.1294973668873205 1.0185740243183157 0.9744440963256427 1.2367529584691042 1.0 21.269804671212093 -5.813547497562314 1.1468613673171504 1.0639543359249877 1.1800457928520525 0.22677439648735875 0.08610096248466408 0.7337486772159102 2.0493763677041383 0.03658913929219757 0.051225281974438104 1.5362167724491414e-06 5.813547497562314 0.1160914569270648 EKSTFREES(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 7 EKSTFREESPLR 12 2 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 EKS(0.061)T(0.008)FREES(0.931)PLR;EKS(0.098)T(0.016)FREES(0.886)PLR;EKSTFREES(1)PLR;EKS(0.007)T(0.003)FREES(0.99)PLR;EKS(0.131)T(0.131)FREES(0.737)PLR;EKS(0.115)T(0.041)FREES(0.843)PLR;EKS(0.159)T(0.159)FREES(0.681)PLR 149.22 1.5334000000000003e-05 12543000000.0 9110080.0 10664020.0 11267230.0 6138920.0 7242150.0 7058700.0 5403460.0 5306060.0 13181020.0 5877860.0 True False 8604725.701905753 10151704.47217964 11993533.67400542 6722361.111066399 7812066.002803158 7014644.035008174 5949694.469487657 5287654.516303715 10787679.03447425 5825786.73330588 1.4770066423325707 1.7425465326670122 2.0586976872048344 1.1538975624759529 1.3409461005741539 1.2040681123642283 1.0212688417640488 0.9076292625121898 1.8517119709860563 1.0 22.474021458506936 -5.2786541390736685 24.605956630233802 1.2046865417330577 1.757729914300474 0.4491536931000233 0.2780625700514333 570.2087712317254 815027.8956561264 0.07718298984436817 0.11480789438848783 5.264363398248579e-06 5.2786541390736685 0.5530433725674164 EKT(ph)PATT(ph)PEAR ddPTM_KYSE-520_SHP099_60min_R1 2 EKTPATTPEAR 11 1 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 2 EKT(0.972)PAT(0.165)T(0.863)PEAR;EKT(0.955)PAT(0.321)T(0.725)PEAR 136.57 0.00015832 665010000.0 1647140.0 1605810.0 1466820.0 1484820.0 1563330.0 1439480.0 1473990.0 1567400.0 1949930.0 1431550.0 True False 1555769.8607078146 1528664.4772300501 1561373.564194979 1625936.8463725904 1686355.1768690606 1430495.671372007 1622995.2939561123 1561963.0552339111 1595871.865735155 1418867.5807290457 1.0964870026196705 1.0773834697418263 1.100436422257749 1.14593981035013 1.1885218887040705 1.0081953318272214 1.1438666412563894 1.1008518881172404 1.1247503906708198 1.0 20.436308521978514 -9.984526118590622 8.713768092773702 1.0000000000000138 1.1095439407645018 0.3441232032501744 0.04539413861685466 1.2981334109022537e-10 0.0 0.04349072809934023 0.010548050922858694 1.036272280854532e-10 9.984526118590622 0.10954394076448803 EKT(ph)PATTPEAR ddPTM_KYSE-520_SHP099_60min_R1 1 EKTPATTPEAR 11 1 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 EKT(0.895)PAT(0.052)T(0.052)PEAR 74.733 0.039176 0.0 853120.0 804660.0 687520.0 686980.0 690350.0 783550.0 725780.0 780770.0 967880.0 864290.0 True False 805795.7329474426 766002.925780716 731838.6392708935 752270.3726519318 744676.617445809 778659.5738068843 799148.9253302042 778061.6911030882 792137.390269261 856633.0630074458 0.9406544852687277 0.8942019154519348 0.8543198609467313 0.8781710689649077 0.869306415551388 0.9089767923189725 0.932895261507386 0.9082788473882725 0.9247102691650086 1.0 19.708317835668037 -8.428032204329115 0.513802709319598 1.0043310137512562 0.8871522097026775 0.6342109549945674 0.024032865958694707 1.1572554486814293 0.5896874757126978 0.038596023640612966 0.013419706698286505 3.732224811252468e-09 8.428032204329115 -0.11717880404857872 EKT(ph)PELPEPSVK ddPTM_KYSE-520_SHP099_60min_R1 14 EKTPELPEPSVK 12 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 EKT(0.984)PELPEPS(0.016)VK;EKT(1)PELPEPSVK;EKT(0.859)PELPEPS(0.141)VK;EKT(1)PELPEPSVK;EKT(1)PELPEPSVK;EKT(1)PELPEPSVK;EKT(0.981)PELPEPS(0.019)VK;EKT(0.999)PELPEPS(0.001)VK;EKT(0.999)PELPEPS(0.001)VK;EKT(0.998)PELPEPS(0.002)VK;EKT(0.97)PELPEPS(0.03)VK;EKT(1)PELPEPSVK;EKT(1)PELPEPSVK;EKT(1)PELPEPSVK 207.04 1.1015e-08 216579450000.0 63318460.0 61273630.0 51092440.0 43341610.0 45635870.0 60042120.0 49629950.0 58630670.0 70102490.0 58099980.0 True False 59806058.8015793 58329952.84120635 54385940.43319444 47460783.583269805 49227153.336418696 59667374.85758642 54647029.68763504 58427293.89027128 57373644.95596243 57585259.37830045 1.0385654149561008 1.012932015431479 0.9444420502808122 0.8241828567877251 0.85485684822614 1.0361570912723987 0.9489760101389314 1.0146223967914978 0.9963251980693906 1.0 25.77919622338872 -6.287048117363121 24.96375384254339 0.9969900266133918 0.9336941156271368 0.20539375117108782 0.06305552877281759 1468.060791891346 1431080.801800856 0.02512605147226286 0.022165844005218677 5.16359156439519e-07 6.287048117363121 -0.06329591098625498 EKT(ph)PPRPQGQRPEPENR ddPTM_KYSE-520_SHP099_60min_R1 4 EKTPPRPQGQRPEPENR 17 3 A9X3U0;Q96GF1 A9X3U0 RNF185 E3 ubiquitin-protein ligase RNF185 1 EKT(1)PPRPQGQRPEPENR;EKT(1)PPRPQGQRPEPENR;EKT(1)PPRPQGQRPEPENR;EKT(1)PPRPQGQRPEPENR 101.17 0.00054261 3848370000.0 862170.0 945520.0 793300.0 980730.0 879550.0 898530.0 933740.0 1108250.0 1223390.0 711780.0 True False 814343.711406716 900095.799945545 844437.3873248784 1073938.2843327732 948765.581045067 892921.9409772203 1028131.5516242187 1104405.7394174954 1001253.2151521997 705474.1829564605 1.1543210667100692 1.2758734787054509 1.1969784404952408 1.522292821308038 1.3448622273731337 1.265704631791364 1.4573624045540325 1.5654800219466793 1.4192627304321832 1.0 19.428233762359007 -5.233993213954294 24.65526853642868 1.3899293331294675 1.2157391983897803 0.17620181799961487 0.15198480488127808 958.9736509832628 861457.4583256746 0.03983624837049123 0.06897752114154103 5.83454220935923e-06 5.233993213954294 -0.17419013473968725 EKT(ph)PS(ph)PKEEDEEPES(ph)PPEKK ddPTM_KYSE-520_SHP099_60min_R1 3 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 EKT(1)PS(1)PKEEDEEPES(1)PPEKK;EKT(1)PS(1)PKEEDEEPES(1)PPEKK;EKT(1)PS(1)PKEEDEEPES(1)PPEKK 136.49 2.6605e-06 11140900000.0 6604140.0 5830640.0 5751490.0 5132560.0 5644240.0 5773180.0 5233110.0 5618170.0 7000950.0 5433360.0 True False 6237795.189173307 5550527.302430934 6122240.248109375 5620356.95923957 6088409.576667397 5737147.44216761 5762123.8290318595 5598681.8795607295 5729753.959587532 5385224.657490114 1.1583166136806167 1.0306955894051526 1.1368588383019775 1.043662487027801 1.130576710146948 1.065349694220838 1.0699876412802074 1.0396375705094727 1.0639767742313637 1.0 22.360575100813477 -7.8488265084690205 0.012449958403815348 1.338682180414214e-07 2.104821188807964 0.40475629826757986 0.037721876324222484 808.537858452252 7.79163773118956 665.7967548424356 649.9343318885927 1.4163594728425968e-08 7.8488265084690205 2.1048210549397464 EKT(ph)PSEDKLSVK ddPTM_KYSE-520_SHP099_60min_R1 2 EKTPSEDKLSVK 12 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EKT(0.934)PS(0.066)EDKLSVK;EKT(0.5)PS(0.5)EDKLSVK 149.57 4.5348999999999996e-05 1709880000.0 2109140.0 1772290.0 1780250.0 1761810.0 1868910.0 1674750.0 1719410.0 1962040.0 2101780.0 1749930.0 True False 1992141.7997336464 1687146.5281384771 1895007.7635007112 1929251.8926925103 2015982.5843566984 1664297.2640330316 1893224.7426244984 1955234.141183577 1720149.733562144 1734426.9816249406 1.1485878741734399 0.9727400150093561 1.092584342596727 1.1123281136257712 1.1623335001788173 0.9595660593758717 1.091556325335059 1.1273084205319315 0.9917683199038909 1.0 20.72602767459822 -7.781400104894381 24.973878954824137 0.9958840285646293 1.0797374094726637 0.22798078328713134 0.06412165586968986 425.7247272973926 532631.0481024024 0.060490143007174146 0.01570049293443498 1.6542452455107436e-08 7.781400104894381 0.0838533809080344 EKT(ph)PSPKEEDEEPES(ph)PPEKK ddPTM_KYSE-520_SHP099_60min_R1 2 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 EKT(0.578)PS(0.426)PKEEDEEPES(0.996)PPEKK;EKT(0.784)PS(0.217)PKEEDEEPES(0.998)PPEKK 136.44 7.2901e-06 3170190000.0 4431340.0 4141330.0 3994940.0 3787590.0 3876840.0 4152520.0 3722570.0 4111190.0 4827130.0 3609210.0 True False 4185524.736542714 3942374.290536941 4252460.224529998 4147561.414819539 4181925.251797799 4126602.5823809174 4098883.704382127 4096929.241448961 3950644.874044781 3577235.2073228937 1.170044599800036 1.1020729871121075 1.1887561141702014 1.1594321240966043 1.169038380041954 1.1535731768303699 1.1458244892567804 1.1452781279414368 1.1043849915033508 1.0 21.770413549631684 -8.24518159801685 1.2755984647985763 0.9999112386825117 1.1561098131283314 0.833461161928389 0.021076732760340208 0.32517376190522523 0.9761474608791468 0.019683840135053345 0.005964488647785483 5.686151176232844e-09 8.24518159801685 0.15619857444581964 EKTIAS(ph)DS(ph)EEEAGKELSDK ddPTM_KYSE-520_SHP099_60min_R1 4 EKTIASDSEEEAGKELSDK 19 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 EKT(0.184)IAS(0.823)DS(0.99)EEEAGKELS(0.004)DK;EKT(0.027)IAS(0.974)DS(0.999)EEEAGKELSDK;EKT(0.009)IAS(0.991)DS(1)EEEAGKELSDK;EKT(0.398)IAS(0.603)DS(0.999)EEEAGKELSDK 103.53 0.00028675 3215950000.0 6341150.0 5947720.0 5719360.0 5092220.0 5298370.0 5636990.0 4893170.0 5219370.0 7339070.0 5375080.0 True False 5989393.768730867 5661982.60349027 6088039.096899548 5576183.057768231 5715321.575398494 5601807.454474733 5387819.376337173 5201265.223680122 6006479.890899106 5327460.972948958 1.1242492059806686 1.062791943899711 1.142765592805381 1.0466867962209765 1.0728040251104531 1.051496666595741 1.0113296753734462 0.976312215160352 1.1274563852082589 1.0 22.345016688709116 -5.806930840406556 1.1152854935189123 1.028915713810828 1.1050539789738885 0.3286985219964106 0.044043796559678335 0.5818212201078761 1.5406003026603579 0.018715513774757383 0.026618881993340004 1.5598008748647553e-06 5.806930840406556 0.07613826516306044 EKTIAS(ph)DS(ph)EEEAGKELSDKK ddPTM_KYSE-520_SHP099_60min_R1 1 EKTIASDSEEEAGKELSDKK 20 3 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 EKT(0.039)IAS(0.961)DS(0.998)EEEAGKELS(0.001)DKK 66.282 0.019602 282500000.0 76862.0 81028.0 67721.0 60087.0 51521.0 94449.0 60000.0 59639.0 95602.0 52860.0 True False 72598.31163940163 77135.29325449238 72086.4040174311 65797.65041418471 55575.40958560952 93859.50875692233 66065.38554357004 59432.12622884725 78243.0867302992 52391.7015244577 1.3856834102918187 1.4722807431341733 1.3759126334879472 1.2558792423160525 1.0607674110310312 1.7914957145094146 1.260989500650769 1.1343805316401665 1.4934251886011654 1.0 15.677050696701196 -12.329788040487847 0.3277249986966832 1.0142390058712272e-12 1.370978484203678 0.22923217958940068 0.19524296001583807 160.76928264454293 3.9114827778613384 110.19336211779319 0.17121862815055805 4.679634773898484e-13 12.329788040487847 1.3709784842026638 EKTPELPEPS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 1 EKTPELPEPSVK 12 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 EKT(0.346)PELPEPS(0.654)VK 133.04 8.181699999999999e-05 33065000000.0 2205800.0 2064900.0 1661500.0 1299000.0 1480900.0 1937000.0 1609800.0 2027800.0 2081000.0 1968500.0 True False 2083439.876846715 1965699.1045219095 1768602.9484939922 1422456.56944141 1597438.4048316032 1924910.4645063335 1772534.294133986 2020766.0350920777 1703142.8577409706 1951060.621469827 1.0678498934990348 1.0075028335311564 0.906482827356548 0.7290683609665628 0.8187538548280354 0.9865969531260421 0.908497806079778 1.0357269337790942 0.8729317987351474 1.0 20.895827173993393 -8.974102647421807 14.322157923929257 1.000012419865777 0.9233195104521004 0.04817734500538173 0.09814524489537026 0.0 0.0 0.10294040764516872 0.02496671610971591 1.0614446504102289e-09 8.974102647421807 -0.07669290941367657 EKTPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 EKTPSPK 7 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EKT(0.04)PS(0.96)PK 62.271 0.060134 904680000.0 2174000.0 1492900.0 1679300.0 1659000.0 2167200.0 1936000.0 2019900.0 1878400.0 2149200.0 2125800.0 True False 2053403.886238443 1421178.8431114156 1787550.3649750012 1816670.8612034605 2337746.3103187648 1923916.7058772636 2224091.204324288 1871884.2688218565 1758959.4569230664 2106967.0658473712 0.9745780650883661 0.6745140283148431 0.8483997656869362 0.8622208152422352 1.1095314911239866 0.9131213947587314 1.0555889744910711 0.8884259745507839 0.834830067083016 1.0 21.006736332786456 -5.5397087701777314 24.9863517538887 0.9651537675859624 0.8231341504747529 0.2780517763621492 0.10073631612825186 290.60305129892305 431435.55949221575 0.029276529033234373 0.03780486702298452 2.8859661297361528e-06 5.5397087701777314 -0.14201961711120947 EKTPS(ph)PKEEDEEPES(ph)PPEKK ddPTM_KYSE-520_SHP099_60min_R1 3 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 EKT(0.313)PS(0.754)PKEEDEEPES(0.933)PPEKK;EKT(0.013)PS(0.987)PKEEDEEPES(1)PPEKK;EKT(0.383)PS(0.653)PKEEDEEPES(0.963)PPEKK 137.28 6.0519000000000005e-06 5343700000.0 4969040.0 4538030.0 4530980.0 3848720.0 4196930.0 4330480.0 3743040.0 4195240.0 5305040.0 3862610.0 True False 4693397.445664338 4320016.2270781025 4823054.220624327 4214501.191640139 4527204.513734824 4303451.868010003 4121423.011750077 4180687.691616377 4341778.465175476 3828390.280465108 1.225945397890348 1.128415838145234 1.2598125758584828 1.1008546367765102 1.1825347423003116 1.1240891217306037 1.07654202153323 1.0920223345432976 1.1341002737704153 1.0 21.868306480389123 -1.0000000000000262 0.03112681975591119 0.45259351161104067 2.1357309941708835 0.6058071173606981 0.04477631879586026 830.8119316231746 1.9860002045140415 33.67024664508869 84.32593905503599 0.09999999999999397 1.0000000000000262 1.6831374825598429 EKTPSPKEEDEEPES(ph)PPEK ddPTM_KYSE-520_SHP099_60min_R1 5 EKTPSPKEEDEEPESPPEK 19 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EKTPSPKEEDEEPES(1)PPEK;EKTPSPKEEDEEPES(1)PPEK;EKTPSPKEEDEEPES(1)PPEK;EKTPSPKEEDEEPES(1)PPEK;EKTPSPKEEDEEPES(1)PPEK 162.77 9.1129e-09 9186800000.0 8602560.0 8112310.0 7506330.0 6548810.0 7035340.0 7650530.0 6314810.0 7015690.0 9690160.0 6791520.0 True False 8125358.848021807 7722582.450774436 7990200.042352638 7171206.933428473 7588981.232391109 7602780.204449982 6953172.621406524 6991354.208864361 7930671.213054913 6731352.416522615 1.2070915835690756 1.1472557032994992 1.1870125864662926 1.065344152213187 1.127408099115919 1.1294580544896717 1.0329532894963924 1.0386254910236987 1.1781690695005775 1.0 22.682464959537786 -1.0000000000000002 0.1571678076067835 1.0138654778955298 1.7128161503839567 0.46577676842973526 0.05020492933791603 59.264437136293395 0.604864267725449 0.1562161827206294 9.550188005151993 0.09999999999999995 1.0000000000000002 0.6989506724884269 EKTPSPKEEDEEPES(ph)PPEKK ddPTM_KYSE-520_SHP099_60min_R1 17 EKTPSPKEEDEEPESPPEKK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKT(0.015)PS(0.015)PKEEDEEPES(0.97)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKT(0.038)PS(0.038)PKEEDEEPES(0.925)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK;EKTPSPKEEDEEPES(1)PPEKK 183.39 5.106100000000001e-13 549889900000.0 51697370.0 46282010.0 46295460.0 39167800.0 42301300.0 41856000.0 37653730.0 40097250.0 56115800.0 36716300.0 True False 48829613.829947844 44058552.76888667 49279739.42695498 42890295.93577157 45630171.64852668 41594761.17830509 41460136.49339146 39958161.998518474 45926585.28420027 36391022.14684915 1.341803855712134 1.2106984132266645 1.354172994319748 1.1785955272895556 1.2538854079007367 1.1429951324383587 1.13929573964938 1.0980225242719153 1.2620306486273496 1.0 25.117079238212778 -1.0000000006096166 0.057860938440852785 0.7077433067087584 2.197513508107307 0.5944198569195093 0.06633703913080644 247.32068566137025 1.0740239376427783 5.789696215044435 31.387822565398913 0.0999999998596306 1.0000000006096166 1.4897702013985488 EKVAS(ph)DTEEADR ddPTM_KYSE-520_SHP099_60min_R1 3 EKVASDTEEADR 12 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 EKVAS(0.6)DT(0.4)EEADR;EKVAS(0.953)DT(0.047)EEADR;EKVAS(0.684)DT(0.316)EEADR 119.46 0.0015819 1365710000.0 2850800.0 2479390.0 2153450.0 2305690.0 2494590.0 2648010.0 2279420.0 2503080.0 3130990.0 2443250.0 True False 2692660.4410710903 2360276.382759739 2292264.832641826 2524822.0843690224 2690900.0407244735 2631482.787360561 2509846.018595407 2494397.399703263 2562481.141834891 2421604.705819738 1.1119322796986377 0.9746745111154553 0.9465891882076892 1.0426235455775363 1.1112053235846253 1.08666900961847 1.036439189502565 1.0300596929418684 1.0581748274921132 1.0 21.207531953143782 -4.221849011523645 22.876522525769037 1.0347778743156963 1.111932922347346 0.2074316821899852 0.04665511598491628 16097.783369847344 9301226.088957002 0.013015890370619508 3.6344728421834587 5.999996381618181e-05 4.221849011523645 0.07715504803164963 EKVELQHIS(ph)QK ddPTM_KYSE-520_SHP099_60min_R1 4 EKVELQHISQK 11 1 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 EKVELQHIS(1)QK;EKVELQHIS(1)QK;EKVELQHIS(1)QK;EKVELQHIS(1)QK 128.9 0.00010501 2430150000.0 1871700.0 1653040.0 1523970.0 1442110.0 1617680.0 1604410.0 1506220.0 1610380.0 1854730.0 1566090.0 True False 1767873.0698585543 1573625.477136373 1622207.5446382137 1579167.7008138166 1744982.2126598612 1594396.2820643282 1658483.4168906028 1604793.967645519 1517957.7859384515 1552215.6609995838 1.1389352100210697 1.013793067983222 1.0450915973838049 1.0173635922452144 1.1241879955882812 1.0271744591454395 1.068461978938278 1.0338730680065915 0.9779296937133909 1.0 20.565897585251008 -7.5902701846426215 3.8385446884669103 0.9896587770299061 1.058699159785989 0.3418736353237636 0.04002895161923473 0.2624996698619615 7.581408167716561 0.029284911683513493 0.010014564229017572 2.56879717741422e-08 7.5902701846426215 0.06904038275608282 EKVESELR ddPTM_KYSE-520_SHP099_60min_R1 6 EKVESELR 8 1 P27348;E9PG15 P27348 YWHAQ 14-3-3 protein theta 0 ;;;;; 123.86 0.00098311 5437680000.0 14278700.0 13248900.0 8395300.0 7110130.0 11162100.0 11443100.0 8467290.0 9777400.0 9484400.0 9849000.0 False True 13486632.047117233 12612402.956995664 8936474.47095493 7785874.617461459 12040493.766338605 11371679.368297568 9323246.305986924 9743484.481462307 7762272.042267414 9761745.522406055 1.3815799660174994 1.2920233300536794 0.9154586595648405 0.7975904104025867 1.2334365548356243 1.164922742781631 0.9550798353211886 0.9981293262663083 0.795172546185591 1.0 23.218707712128488 -4.674919053950327 5.230528445865906 0.9906905015174469 1.3561213917486985 0.5379292688811614 0.13184755874247325 0.16198578763432944 7.241155483176561 0.03620101008674826 0.09972610112870128 2.113882999557937e-05 4.674919053950327 0.36543089023125164 EKVETELQGVCDTVLGLLDSHLIK ddPTM_KYSE-520_SHP099_60min_R1 1 EKVETELQGVCDTVLGLLDSHLIK 24 1 P31947 P31947 SFN 14-3-3 protein sigma 0 64.028 0.026093 288470000.0 10564.0 13781.0 14382.0 10613.0 18804.0 14330.0 6587.1 5572.8 16866.0 7246.4 False True 9977.9938611881 13118.940074297276 15309.086732013611 11621.6563290852 20283.76781987541 14240.561154556399 7252.9883519008445 5553.469257501299 13803.559557260563 7182.202533613893 1.3892665675312612 1.8265901042052868 2.1315309141401344 1.6181187142375795 2.8241709593880193 1.9827568337022274 1.0098557257269845 0.7732264902737211 1.9219117662942011 1.0 12.810210621335013 -6.754887566486725 24.54542408401946 1.157350658578437 1.9871689353412516 0.42239298133270387 0.44939096274601376 117.13838289171265 438844.0674810818 0.17584914208985605 0.1328681191352759 1.758378777731087e-07 6.754887566486725 0.8298182767628146 EKVIET(ph)PENDFK ddPTM_KYSE-520_SHP099_60min_R1 8 EKVIETPENDFK 12 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 EKVIET(1)PENDFK;EKVIET(1)PENDFK;EKVIET(1)PENDFK;EKVIET(1)PENDFK;EKVIET(1)PENDFK;EKVIET(1)PENDFK;EKVIET(1)PENDFK;EKVIET(1)PENDFK 197.51 1.3392999999999998e-07 15394040000.0 26917200.0 24234100.0 21861200.0 19538290.0 20953000.0 22890600.0 20935180.0 22763500.0 28557300.0 23149500.0 True False 25424049.25789211 23069857.459874325 23270407.931156732 21395203.207198903 22601881.893738035 22747731.274563048 23051512.30206731 22684538.73154082 23372014.190949675 22944413.440038476 1.108071440759807 1.0054673012305884 1.0142080115480046 0.932479850187141 0.9850712441529355 0.9914278843523533 1.0046677533208124 0.9886737262132764 1.0186363775229497 1.0 24.451639589812704 -4.112653361012306 1.9496733228889336 0.9894023508532777 1.1802674801737325 0.7029202428897203 0.022490636245733255 0.7136845611391122 2.0616116445784223 0.006186066366518949 0.27875219503043414 7.71519023446646e-05 4.112653361012306 0.19086512932045485 EKVS(ph)SIDLEIDSLSSLLDDMTK ddPTM_KYSE-520_SHP099_60min_R1 10 EKVSSIDLEIDSLSSLLDDMTK 22 1 Q15942;H7C3R3;C9IZ41 Q15942 ZYX Zyxin 1 EKVS(0.5)S(0.5)IDLEIDSLSSLLDDMTK;EKVS(0.5)S(0.5)IDLEIDSLSSLLDDMTK;EKVS(0.5)S(0.5)IDLEIDS(0.001)LSSLLDDMTK;EKVS(0.5)S(0.5)IDLEIDSLSSLLDDMTK;EKVS(0.5)S(0.5)IDLEIDSLSSLLDDMTK;EKVS(0.5)S(0.5)IDLEIDSLSSLLDDMTK;EKVS(0.5)S(0.5)IDLEIDSLSSLLDDMTK;EKVS(0.5)S(0.5)IDLEIDSLSSLLDDMTK;EKVS(0.5)S(0.5)IDLEIDSLSSLLDDMTK;EKVS(0.737)S(0.263)IDLEIDSLSSLLDDMTK 191.51 8.5165e-14 4333213000.0 555963.0 645765.0 570988.0 570505.0 508103.0 698407.0 676570.0 980558.0 1260542.0 1312569.0 True False 525122.6241052363 614741.4800869735 607794.8000931011 624725.6236714169 548087.8153893935 694047.9828520772 744964.2982868872 977156.6731619585 1031659.3484779052 1300940.6598232281 0.40364840635897253 0.4725361417872085 0.46719640554219305 0.48021069904626135 0.42130116485395086 0.5334970335590745 0.5726351103424756 0.7511154838489978 0.7930103042655974 1.0 20.31112372682093 -7.545691555838603 0.7899521662480782 0.994052250606075 0.4440208653520434 0.9726520941830247 0.03062203778984559 0.0846128596968941 0.1065218555647008 0.02814206997792769 0.011577149829701868 2.846482015125031e-08 7.545691555838603 -0.5500313852540317 down EKVWAHYEEQPVEEVMPVLEEK ddPTM_KYSE-520_SHP099_60min_R1 1 EKVWAHYEEQPVEEVMPVLEEK 22 1 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 0 124.98 7.7101e-05 224930000.0 321480.0 281070.0 169340.0 172720.0 269690.0 261600.0 188920.0 206430.0 228560.0 219920.0 False True 303646.8635455084 267566.9753053289 180255.92735357975 189135.25686983851 290913.0686738032 259967.25736440695 208017.87728152098 205713.9425111243 187059.2655287248 217971.67989517073 1.3930564910613228 1.2275309133462204 0.826969482642288 0.8677056439662229 1.3346369987776037 1.1926652925253096 0.9543344226257428 0.9437645413847269 0.8581815106379294 1.0 17.733781178572578 -4.557516775930145 6.243796174610026 1.0082659463916568 1.355358283387378 0.4278233445058973 0.14982259729463995 0.158778113777492 17.744541395226815 0.04211452439764722 0.11864223275017768 2.7700220366673855e-05 4.557516775930145 0.3470923369957213 EKYEITEQR ddPTM_KYSE-520_SHP099_60min_R1 2 EKYEITEQR 9 1 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 ; 123.8 0.00076226 5609100000.0 7858000.0 6821200.0 4645800.0 4647000.0 7598600.0 6897100.0 5621500.0 6504500.0 5621300.0 5749500.0 False True 7422101.075465358 6493499.313170069 4945275.701542827 5088649.482828499 8196566.589880103 6854052.640550654 6189776.08055299 6481937.40766172 4600613.621441295 5698563.903043319 1.3024511441385407 1.1394974986070112 0.8678108705426296 0.8929705043951346 1.438356527949564 1.2027684092285509 1.086199292640614 1.137468582952986 0.8073286006294212 1.0 22.442166960356026 -7.747258692733531 24.958316786102788 0.903664319084581 1.1276724213684766 0.23388115180919478 0.16608480448299118 319.02910843730194 561504.4566327366 0.12076553006986514 0.04515952430495052 1.7895395757162387e-08 7.747258692733531 0.22400810228389556 EKYIDQEELNK ddPTM_KYSE-520_SHP099_60min_R1 7 EKYIDQEELNK 11 1 P08238;P07900;P07900-2;Q14568;Q58FF8 P08238;P07900;Q58FF8 HSP90AB1;HSP90AA1;HSP90AA2P;HSP90AB2P Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-beta 2 0 ;;;;;; 186.58 3.2969000000000004e-07 18346750000.0 28558740.0 25986240.0 16185520.0 15800300.0 26391120.0 25826380.0 17664410.0 21967580.0 21747600.0 21655540.0 False True 26974529.76176325 24737822.02425853 17228864.516947646 17301955.761466566 28467950.999067802 25665187.982610766 19450100.950828254 21891379.592251725 17798784.052382287 21463688.76335519 1.2567518127553488 1.1525428968432139 0.8026982084441313 0.8061035524800414 1.326330777199441 1.195749168075376 0.9061863114617688 1.0199262500314823 0.8292509385791145 1.0 24.355394704111784 -6.786328311386042 24.792210501495553 0.9405013472583023 1.0776457190242177 0.15854477699255376 0.1691789530751516 501.07873628586697 499126.27583783446 0.0775771387951133 0.05232867624211791 1.6355796131728875e-07 6.786328311386042 0.13714437176591543 ELAILLGMLDPAEKDEK ddPTM_KYSE-520_SHP099_60min_R1 1 ELAILLGMLDPAEKDEK 17 1 P30041 P30041 PRDX6 Peroxiredoxin-6 0 146.58 8.541e-06 683040000.0 202860.0 126690.0 92930.0 100760.0 175900.0 132850.0 95636.0 99830.0 112880.0 81177.0 False True 191606.95140861595 120603.62223443319 98920.4164932572 110336.20010540135 189742.32926590522 132020.83387179454 105303.82019741437 99483.71303049725 92383.8374732346 80457.8349347504 2.381457959489031 1.4989667859225912 1.2294690327359612 1.3713543273303548 2.3582828126034245 1.640869829257283 1.308807529842352 1.2364701723726028 1.1482267394860417 1.0 16.295945296099564 -6.835727633832009 3.1072351936592812 1.1624300462756783 1.7265625976606016 0.386911251291872 0.358808962358593 0.31915176850856153 6.19436843304017 0.173666717730677 0.1135239551601083 1.4597294371542304e-07 6.835727633832009 0.5641325513849234 ELALGQDR ddPTM_KYSE-520_SHP099_60min_R1 2 ELALGQDR 8 0 J3KQ18;P30046;B5MC82;P30046-2;A6NHG4 J3KQ18 DDT;DDTL D-dopachrome decarboxylase;D-dopachrome decarboxylase-like protein 0 ; 165.72 0.0013081 222910000.0 387570.0 521260.0 416160.0 270360.0 453310.0 567440.0 321776.0 399230.0 458480.0 451440.0 False True 366070.71949835995 496217.8871727892 442986.33947954245 296054.9331133019 488982.91801891784 563898.3964788188 354304.2583111297 397845.16431098245 375231.5893402604 447440.5928150053 0.8181437388040298 1.1090140124545003 0.9900450397058533 0.6616631076110389 1.0928443370382541 1.2602754545159545 0.7918464797350586 0.8891575120799822 0.8386176743141414 1.0 18.771336621303977 -9.914902561456728 4.417839576095255 1.0000008492659538 0.9455784710441986 0.010296406165169913 0.1686756903149751 105345637.97735664 945.7960188552687 937.6109153928711 0.04293025174812945 1.2164588954030966e-10 9.914902561456728 -0.05442237822175522 ELAPYDENWFYTR ddPTM_KYSE-520_SHP099_60min_R1 4 ELAPYDENWFYTR 13 0 P39019;M0R2L9;M0QYF7;M0R140 P39019 RPS19 40S ribosomal protein S19 0 ;;; 216.06 2.1304e-10 2746671000.0 771700.0 711180.0 587830.0 618483.0 829940.0 818560.0 669330.0 672420.0 727370.0 674320.0 False True 728892.2626541888 677013.8452970563 625722.4623612543 677263.4383663059 895251.556287354 813451.0634105859 736992.4084312968 670087.5319640072 595297.9435055509 668346.0494130212 1.0905911141306852 1.0129690238936067 0.936225272687403 1.0133424727521265 1.3395030270226238 1.2171106032945118 1.102710802403283 1.0026056599758695 0.8907031679597339 1.0 19.350235754535955 -7.410534434516125 3.6210526317533995 0.9452733349844528 1.1019559133944135 0.25768280401678556 0.10926326213484241 0.38740697260327894 9.093345158572674 0.07969411762877468 0.033581057718044635 3.8856668790062764e-08 7.410534434516125 0.1566825784099607 ELAQIAGRPT(ph)EDEDEKEK ddPTM_KYSE-520_SHP099_60min_R1 3 ELAQIAGRPTEDEDEKEK 18 2 O15355 O15355 PPM1G Protein phosphatase 1G 1 ELAQIAGRPT(1)EDEDEKEK;ELAQIAGRPT(1)EDEDEKEK;ELAQIAGRPT(1)EDEDEKEK 178.35 1.4623e-08 3478070000.0 766410.0 768330.0 753620.0 864580.0 861420.0 851820.0 818130.0 823030.0 949520.0 883840.0 True False 723895.7094995427 731418.2735131581 802199.551034634 946749.4232545441 929208.8531906557 846503.4754134151 900834.5645793494 820175.101026646 777111.1034513253 876009.8652171151 0.8263556590428675 0.8349429641775544 0.9157425993551025 1.0807520107320898 1.0607287544191701 0.9663172859401681 1.0283383787648117 0.9362624025054435 0.8871031415367928 1.0 19.740587591317677 -4.952660401061044 3.8557342953901994 0.9951177958859831 0.8327645163645844 0.5946624377460437 0.05401158526692014 0.158280980172831 4.950540663299227 0.015894093776960667 0.03494804819819212 1.1151662030390454e-05 4.952660401061044 -0.16235327952139877 ELAS(ph)PVSPELR ddPTM_KYSE-520_SHP099_60min_R1 1 ELASPVSPELR 11 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 ELAS(1)PVSPELR 94.76700000000001 0.004592000000000001 65774000.0 566900.0 562600.0 532520.0 425840.0 549420.0 547620.0 521610.0 581940.0 673780.0 562860.0 True False 535452.9269128669 535571.851520183 566847.0912621256 466311.70556653565 592656.2282278216 544202.1004506751 574339.4292230257 579921.3859658167 551438.5366115868 557873.4982984543 0.9598106533936969 0.9600238282580323 1.016085354459463 0.8358735573365874 1.062348776264613 0.9754937313038211 1.0295155281166668 1.0395213031890018 0.9884651955927383 1.0 19.08957849242698 ELASPVS(ph)PELR ddPTM_KYSE-520_SHP099_60min_R1 1 ELASPVSPELR 11 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 ELAS(0.075)PVS(0.925)PELR 84.365 0.004512899999999999 285830000.0 477200.0 440570.0 480500.0 307020.0 494380.0 460090.0 406910.0 484510.0 492300.0 424920.0 True False 450728.7647253843 419404.3558909483 511473.7988271831 336199.0884910712 533284.8933625827 457218.4076482801 448044.4338589013 482829.347895484 402910.72987308045 421155.5393827574 1.070219248180777 0.9958419554581294 1.2144534524627066 0.7982777312719245 1.2662421445154473 1.085628384036872 1.0638455201504702 1.1464395045191982 0.956679165287921 1.0 18.683993616171698 -7.779000925940856 24.96640041846999 0.978339510145729 1.0782377732610458 0.10243364587229775 0.12040886501389604 638.4887917090298 907682.0604492644 0.1077854119174293 0.02808930032496719 1.6634091038823455e-08 7.779000925940856 0.0998982631153168 ELASQPDVDGFLVGGASLKPEFVDIINAK ddPTM_KYSE-520_SHP099_60min_R1 2 ELASQPDVDGFLVGGASLKPEFVDIINAK 29 1 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 0 ; 264.23 4.8663e-41 402890000.0 562250.0 432840.0 352460.0 384650.0 476400.0 482360.0 336360.0 452160.0 439660.0 383210.0 False True 531060.871682413 412045.71669391426 375180.13555593905 421207.0203507602 513889.9696547887 479349.4123176435 370362.5513572538 450591.5624949374 359828.82692666806 379815.0575328682 1.3982091050628145 1.0848588241087755 0.9877968977664136 1.1089792571330852 1.3530005181806624 1.2620600547837995 0.9751128714142767 1.1863446526364858 0.9473790461704626 1.0 18.534937575809913 -7.422651211420302 1.2423126881714188 0.9891185399560342 1.1773137612306321 0.23294403348775994 0.13546045532267587 0.8158735131846274 2.2162624954086367 0.12693592986260002 0.045068743474940984 3.77875546759165e-08 7.422651211420302 0.18819522127459798 ELATRPGR ddPTM_KYSE-520_SHP099_60min_R1 3 ELATRPGR 8 1 C9JSL4;C9J313;Q8IVL5-2;Q8IVL5 C9JSL4 LEPREL1 Prolyl 3-hydroxylase 2 0 ;; 90.601 0.014166 457540000.0 446820.0 430040.0 297659.0 271629.0 387410.0 400700.0 328222.0 298744.0 329134.0 396820.0 False True 422034.0038864123 409380.2328967998 316846.5754112394 297444.53849176347 417896.96293862676 398199.0826678818 361401.88289802766 297707.7267913738 269371.5623929444 393304.4835212888 1.0730465112116334 1.0408735472110144 0.8056012292931035 0.7562703985185142 1.0625278389840853 1.0124448089245544 0.9188857438449864 0.7569395703958699 0.6848931900832599 1.0 18.58528710698527 -7.156643595525671 4.937945306602622 0.7916290321116499 0.9516086476989727 0.20474043581857926 0.12429603722524446 0.34101076860337765 12.821655543196433 0.0636956113813962 0.03583479007169684 6.97198436437239e-08 7.156643595525671 0.15997961558732277 ELDDRDHYGNKR ddPTM_KYSE-520_SHP099_60min_R1 5 ELDDRDHYGNKR 12 2 C9J4M6;C9J2Y9;P30876 C9J4M6 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 0 ;;;; 174.24 2.1939e-06 3640750000.0 3521950.0 3904320.0 3251400.0 3014670.0 3917150.0 3875590.0 3454310.0 3384930.0 3830500.0 2209500.0 False True 3326580.412666738 3716750.6066961996 3460990.4464239394 3301183.330406418 4225407.419465271 3851401.005232883 3803505.3656168273 3373188.4678785997 3134977.759046998 2189925.548964987 1.5190381308802767 1.6972040937431996 1.5804146620690778 1.5074408954069871 1.9294753748419908 1.758690384270438 1.736819485673592 1.5403210714048483 1.4315453603108406 1.0 21.062450392591355 -8.10295817349231 1.4748436947196946 1.0031387538474652 1.6770558882878546 0.7424382380540409 0.12014121966422595 0.27842022964860963 1.2961481140343254 0.12109710935817164 0.035701020046310254 7.889360956796955e-09 8.10295817349231 0.6739171344403894 ELDFWQEGWR ddPTM_KYSE-520_SHP099_60min_R1 2 ELDFWQEGWR 10 0 Q5JRX3-3;Q5JRX3;Q5JRX3-2 Q5JRX3-3 PITRM1 Presequence protease, mitochondrial 0 ; 113.93 0.004688800000000001 121900000.0 145399.0 155726.0 123200.0 114766.0 190090.0 175579.0 137736.0 124301.0 129792.0 146563.0 False True 137333.4276242793 148244.68921050866 131141.6691269696 125673.326134344 205049.00153584962 174483.1463332767 151659.69905381955 123869.82884307162 106225.04459006063 145264.56584428874 0.9454021139022235 1.020515143172729 0.902778102593459 0.8651340772880229 1.4115555321016462 1.201140452381951 1.0440240410478758 0.8527188177180769 0.7312522773373711 1.0 17.148323306002823 -7.255685269811422 5.535556756808912 0.8421725056157382 1.0611911091947428 0.232918673580225 0.1607022303571165 0.24727430483160867 28.794712027844167 0.09043706555443622 0.04719393684310999 5.550277920265477e-08 7.255685269811422 0.2190186035790046 ELDPSLVSANDS(ph)PSGMQTR ddPTM_KYSE-520_SHP099_60min_R1 4 ELDPSLVSANDSPSGMQTR 19 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 ELDPSLVS(0.002)ANDS(0.997)PS(0.001)GMQTR;ELDPS(0.001)LVS(0.076)ANDS(0.912)PS(0.01)GMQTR;ELDPSLVSANDS(1)PSGMQTR;ELDPSLVSANDS(1)PSGMQTR 237.14 5.0141000000000005e-26 2249880000.0 691419.0 838840.0 541122.0 447367.0 495652.0 724152.0 636308.0 646309.0 699830.0 708221.0 True False 653064.6097603944 798540.8672754905 576003.5899458121 489884.6251742066 534656.9925258929 719632.2987574546 700632.2224076326 644067.1049286546 572758.5132786465 701946.712927601 0.9303620883651773 1.1376089560203586 0.8205802225976395 0.6978943218225933 0.7616774645129475 1.025195054701649 0.9981273642346924 0.9175441569381406 0.8159572553447102 1.0 19.421001989421047 -4.772488981260413 24.99883917932504 0.8754059194255801 1.0339855464309393 0.22986447457805803 0.1128081868342354 288.6139314517194 652969.7160012723 0.03205446986604684 0.06773875983172657 1.6885386998473064e-05 4.772488981260413 0.1585796270053592 ELDQDMVT(ph)EDEDDPGSHKR ddPTM_KYSE-520_SHP099_60min_R1 2 ELDQDMVTEDEDDPGSHKR 19 1 Q9NRL2;Q9NRL2-2;A0A087WWN7 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 ELDQDMVT(1)EDEDDPGSHKR;ELDQDMVT(1)EDEDDPGSHKR 147.11 3.3722e-06 963490000.0 468200.0 474660.0 392260.0 435070.0 424510.0 458120.0 434440.0 504060.0 493210.0 484210.0 True False 442228.0126664395 451856.6211208145 417545.7072381912 476418.9219914349 457916.5218685025 455260.70314901404 478357.4349258092 502311.53350848844 403655.49681231345 479920.27610967995 0.9214614065719817 0.94152433980003 0.8700313948451851 0.9927043005004338 0.9541512302427732 0.9486173554479489 0.9967435399968106 1.0466562021098922 0.8410886493157103 1.0 18.872435241074868 -5.275583137061283 24.849658545441564 0.9702521735905634 0.9140575728051078 0.1974443248225125 0.05299666770681945 1162.4016969455145 2042261.7709630278 0.014433603747123621 0.0215297257311788 5.301720919870534e-06 5.275583137061283 -0.05619460078545557 ELDTVTLEDIKEHVK ddPTM_KYSE-520_SHP099_60min_R1 2 ELDTVTLEDIKEHVK 15 1 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 0 ; 196.95 2.8420000000000004e-11 853670000.0 1117620.0 947150.0 721800.0 604070.0 1147470.0 840900.0 677220.0 690090.0 835410.0 717510.0 False True 1055623.3906797655 901647.4922988658 768328.3829208333 661480.6311797327 1237769.3607887905 835651.6311839825 745680.0066302756 687696.2388582175 683720.6029723138 711153.4196143328 1.4843820778535284 1.2678663526470002 1.0803975087928384 0.9301517969757661 1.7405096096705095 1.1750651942827843 1.0485501244368156 0.9670153020302757 0.9614248966743404 1.0 19.439801305505238 -6.729069022793255 3.586015693970367 0.9846200240684474 1.2806406494468443 0.3265364011290872 0.20559388995692177 0.3075411742577754 8.266391261588032 0.09054233492725602 0.06455025489397441 1.866083089085184e-07 6.729069022793255 0.2960206253783969 ELEAENYHDIKR ddPTM_KYSE-520_SHP099_60min_R1 2 ELEAENYHDIKR 12 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2;F8W6C1 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ; 141.58 6.7332e-05 1118210000.0 1121930.0 955510.0 731960.0 539990.0 1104370.0 929430.0 718320.0 782540.0 870770.0 779190.0 False True 1059694.3063879933 909605.8653502504 779143.3127774075 591310.4872460866 1191277.6359942467 923629.0826154465 790934.7957276218 779825.5513862089 712660.1183253758 772286.9828006478 1.3721509361003104 1.1778081019203828 1.008877956160669 0.7656616004347737 1.5425323260974266 1.1959661410658076 1.0241462219903654 1.0097613565338404 0.9227918302351296 1.0 19.55877752883043 -6.871873558565149 4.5269090852612806 0.9825239271849049 1.167033875272065 0.185547328152031 0.19366574230574007 0.4388919184635249 15.351082731275298 0.08889092617934277 0.05901061578324953 1.3431559535475104e-07 6.871873558565149 0.18450994808716015 ELEAHSAEAR ddPTM_KYSE-520_SHP099_60min_R1 1 ELEAHSAEAR 10 0 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 0 68.893 0.042947000000000006 6071200.0 15608.0 13589.0 9495.4 10851.0 14171.0 13033.0 10762.0 13190.0 13358.0 11873.0 False True 14742.193126223385 12936.164042495147 10107.488677177167 11882.27577752789 15286.17707803948 12951.656212654121 11849.927986998347 13144.246968569147 10932.52392777699 11767.81445705422 1.252755401610379 1.0992834812024554 0.8589095888674748 1.0097266421807878 1.2989818231605594 1.1005999678122258 1.0069778063075174 1.1169658577247386 0.9290190602234967 1.0 13.522558784484096 -7.7598973733814445 24.99432110101837 0.9645095050205197 1.086902705366181 0.15672564460613758 0.11856370461357492 81.88704511945711 1327493.8931946612 0.09602696676903208 0.03184093736775436 1.738211530943091e-08 7.7598973733814445 0.12239320034566137 ELEAIFGRPVVDGEEGEPHS(ph)IS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 ELEAIFGRPVVDGEEGEPHSISPR 24 1 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 2 ELEAIFGRPVVDGEEGEPHS(1)IS(1)PR;ELEAIFGRPVVDGEEGEPHS(1)IS(1)PR;ELEAIFGRPVVDGEEGEPHS(1)IS(1)PR;ELEAIFGRPVVDGEEGEPHS(1)IS(1)PR 126.88 6.5863e-05 806270000.0 1057560.0 1068790.0 999940.0 1036000.0 1106380.0 1094800.0 1121730.0 1060730.0 1259460.0 1062530.0 True False 998895.0386064074 1017443.7241135032 1064397.7323605681 1134461.1285152414 1193445.811558911 1087966.9471045593 1235125.4154298154 1057050.5752062432 1030773.8124029052 1053116.8108358309 0.9485130503363733 0.9661261824374308 1.010711937563492 1.0772414957604273 1.1332511258762499 1.0330923748535252 1.1728285055572603 1.003735354264538 0.978783931466071 1.0 20.006234037090508 -4.948107341120762 2.6528357488316754 1.063817183001368 0.954905768617051 0.3208489704711768 0.057420785550025166 0.31141247600375677 4.396550917401898 0.0164237166672724 0.040516988152365964 1.1269188901520015e-05 4.948107341120762 -0.10891141438431706 ELEAIFGRPVVDGEEGEPHSIS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 17 ELEAIFGRPVVDGEEGEPHSISPR 24 1 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 ELEAIFGRPVVDGEEGEPHS(0.393)IS(0.607)PR;ELEAIFGRPVVDGEEGEPHS(0.235)IS(0.765)PR;ELEAIFGRPVVDGEEGEPHS(0.25)IS(0.75)PR;ELEAIFGRPVVDGEEGEPHS(0.098)IS(0.902)PR;ELEAIFGRPVVDGEEGEPHS(0.004)IS(0.996)PR;ELEAIFGRPVVDGEEGEPHS(0.007)IS(0.993)PR;ELEAIFGRPVVDGEEGEPHS(0.044)IS(0.956)PR;ELEAIFGRPVVDGEEGEPHSIS(1)PR;ELEAIFGRPVVDGEEGEPHS(0.003)IS(0.997)PR;ELEAIFGRPVVDGEEGEPHSIS(1)PR;ELEAIFGRPVVDGEEGEPHS(0.018)IS(0.982)PR;ELEAIFGRPVVDGEEGEPHS(0.102)IS(0.898)PR;ELEAIFGRPVVDGEEGEPHS(0.006)IS(0.994)PR;ELEAIFGRPVVDGEEGEPHSIS(1)PR;ELEAIFGRPVVDGEEGEPHS(0.326)IS(0.674)PR;ELEAIFGRPVVDGEEGEPHS(0.003)IS(0.997)PR;ELEAIFGRPVVDGEEGEPHSIS(1)PR 261.84 1.0969e-37 80655810000.0 15048190.0 16213950.0 14775160.0 14848920.0 16369350.0 17064070.0 16263620.0 16433720.0 19519690.0 16953830.0 True False 14213436.902876936 15435007.504364884 15727590.454691844 16260156.892309414 17657524.716139004 16957566.809534628 17907705.42723527 16376715.260979066 15975406.347341618 16803632.25608014 0.8458550321900802 0.9185518505250531 0.935963737780625 0.9676572686495162 1.050815945448336 1.009160790423677 1.0657044354654714 0.9745937670739848 0.9507114952221809 1.0 24.0022697824198 -4.758486575917389 1.1068989178777988 1.0091175481190577 0.8379574117738102 0.695794257965435 0.03386703515867358 0.48968064080435575 0.860519379170971 0.012101203628256245 0.08134224791558142 1.743867259731091e-05 4.758486575917389 -0.17116013634524752 ELEDFK ddPTM_KYSE-520_SHP099_60min_R1 2 ELEDFK 6 0 P00367;P49448;P00367-2;P00367-3;A6NF36 P00367 GLUD1;GLUD2;CCDC182 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial;Coiled-coil domain-containing protein 182 0 ; 112.75 0.066375 628180000.0 1248440.0 1495710.0 1180880.0 943740.0 1609230.0 1569850.0 1243100.0 1315180.0 1487220.0 1341460.0 False True 1179186.54449656 1423853.8464935205 1257001.4142748045 1033432.7658542237 1735867.2457337852 1560051.9838437082 1368764.6794868673 1310617.9475453203 1217178.3377652718 1329575.7080400877 0.8868893567819356 1.0709084393489763 0.945415448457415 0.7772650775769626 1.3055798441839819 1.1733457330860557 1.029474795011521 0.9857414960425888 0.9154637305757491 1.0 20.34253449808369 -4.248399816603376 22.423855409612173 1.0258251872768342 0.8868889670462572 0.08186509533273378 0.1359308484038342 1432.0623905634666 2462495.0905017266 0.03583872174983267 0.5716703586284638 5.644171265207304e-05 4.248399816603376 -0.13893622023057706 ELEEEEENS(ph)DEDELDSHTMVK ddPTM_KYSE-520_SHP099_60min_R1 13 ELEEEEENSDEDELDSHTMVK 21 0 A0A087WZ06;Q13188;Q13188-2;E5RFQ9 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK;ELEEEEENS(1)DEDELDSHTMVK 349.24 8.741199999999998e-66 20763578000.0 10029302.0 9495279.0 9110121.0 8423365.0 8753104.0 8091454.0 8417606.0 9059300.0 11731683.0 8816516.0 True False 9472956.625142131 9039111.544135662 9697373.976368979 9223919.077022975 9441923.486450912 8040952.23421354 9268539.76239782 9027875.40275651 9601505.09886169 8738408.527385646 1.0840597112682997 1.0344116455310632 1.1097414301446302 1.0555605231908955 1.0805083622332936 0.9201849752175902 1.060666794571434 1.033125811692563 1.0987704533120821 1.0 23.058939123796637 ELEELKEIEADLER ddPTM_KYSE-520_SHP099_60min_R1 4 ELEELKEIEADLER 14 1 K7EJH0;K7EMX1;K7EJV2;K7ESQ2;Q8NBT2 K7EJH0 SPC24 Kinetochore protein Spc24 0 ;;; 139.6 6.7344e-06 80946000.0 256917.0 260706.0 191761.0 157589.0 257075.0 240766.0 174166.0 184070.0 223785.0 189587.0 False True 242665.3018586579 248181.29243231568 204122.22088844818 172566.2111791395 277305.33994333487 239263.29008638702 191772.39897635687 183431.50413226098 183151.28516077079 187907.40667645412 1.2914089239520397 1.320763757118118 1.0862915118610164 0.9183576860079302 1.4757552394984057 1.2733041997559966 1.0205686000794936 0.9761802761085415 0.9746890151920802 1.0 17.51966240849011 -6.833253626711022 5.753986689235766 0.986368105024018 1.2224067175513744 0.4071100701763617 0.1389720454207005 0.2352505378430435 13.73936385147128 0.06329001772635019 0.042645702003117285 1.4680686794229394e-07 6.833253626711022 0.23603861252735647 ELEELKR ddPTM_KYSE-520_SHP099_60min_R1 1 ELEELKR 7 1 Q8TE76-2;Q8TE76-3;Q8TE76 Q8TE76-2 MORC4 MORC family CW-type zinc finger protein 4 0 110.35 0.0073212 451760000.0 685540.0 621120.0 419840.0 362670.0 623290.0 639460.0 471220.0 546830.0 558900.0 539680.0 False True 647511.7296098908 591280.4628798725 446903.5581677515 397138.0477592882 672339.3769650152 635468.8929443571 518855.5162640186 544933.1743610816 457417.84872245515 534898.8550646867 1.210531156458702 1.105406110484883 0.8354917082664277 0.7424544733999501 1.2569467490890542 1.1880169249334216 0.9700067804431401 1.0187592835568537 0.8551483040043868 1.0 19.028906590077753 -7.457459935841843 2.5924635194891663 0.9316958490687339 1.041219647682685 0.07183907770972009 0.1580381349129659 0.9627701527502617 12.198351056577541 0.1308578122561738 0.04734383737212849 3.487707571488183e-08 7.457459935841843 0.109523798613951 ELEELRK ddPTM_KYSE-520_SHP099_60min_R1 2 ELEELRK 7 1 P61129 P61129 ZC3H6 Zinc finger CCCH domain-containing protein 6 0 ; 132.09 0.004790399999999999 1983680000.0 2622360.0 2649120.0 1771530.0 1584600.0 2696080.0 2677500.0 1925500.0 2180480.0 2514430.0 2488430.0 False True 2476892.4632549426 2521852.298789812 1885725.6583482195 1735199.9075726394 2908246.157403197 2660788.729331801 2120148.3310690685 2172916.42380786 2057872.8956221188 2466384.4461692423 1.0042604943856264 1.022489540390478 0.76457085239777 0.7035399166045384 1.1791536238076141 1.0788215654962086 0.8596179457594523 0.881012863660735 0.8343682586947795 1.0 21.233966265801598 -11.40471533084345 2.0781217985901237 1.515916984641743 0.9256680011392894 0.025314042138991022 0.13901355667264906 11257512.979706166 1032124.309266671 27334011.75260468 0.038076138550788945 3.938081222366538e-12 11.40471533084345 -0.5902489835024537 ELEEVS(ph)PETPVVPATTQR ddPTM_KYSE-520_SHP099_60min_R1 1 ELEEVSPETPVVPATTQR 18 0 Q15149 Q15149 PLEC Plectin 1 ELEEVS(0.992)PET(0.008)PVVPATTQR 226.74 1.4905999999999998e-15 0.0 119260.0 137630.0 89424.0 88270.0 90092.0 152820.0 92629.0 130390.0 153870.0 147040.0 True False 112644.41006108407 131018.04821315836 95188.4141234589 96659.1542606567 97181.7278466398 151866.19369429917 101992.84329192256 129937.70752325469 125931.08674704623 145737.3399953888 0.7729275837245843 0.8990012320610754 0.6531504837845312 0.6632422017838053 0.6668279237820224 1.0420541070607183 0.6998401596677261 0.8915883021287887 0.8640962347126053 1.0 17.15301103834866 -6.2344377233824915 24.99902729837734 0.8802603511167698 0.7322690101606106 0.36892024993254724 0.10872700213608946 959.8693054637604 888679.4240678595 0.03637299534614981 0.03636421698274703 5.828573489223916e-07 6.2344377233824915 -0.14799134095615918 ELEEWYAR ddPTM_KYSE-520_SHP099_60min_R1 5 ELEEWYAR 8 0 F8WF69;P09496-2;P09496-4;P09496-3;P09496;C9J8P9;P09496-5 F8WF69 CLTA Clathrin light chain A 0 ;;;; 108.46 0.017407 88225000.0 1041760.0 983840.0 665120.0 651208.0 997570.0 966110.0 785970.0 753397.0 828177.0 914850.0 False True 983971.4961029254 936574.8496260523 707994.6994296273 713098.6125271748 1076073.0836031232 960080.1491296906 865423.5179279952 750783.6416511824 677800.9334432224 906745.1407425307 1.0851687556849263 1.0328975668500349 0.7808089259236092 0.7864377546520079 1.1867425975086345 1.0588202858671887 0.9544286250261045 0.8279985278292952 0.74750986025486 1.0 19.790337583234034 -7.188352350675982 4.788881197641191 0.8408920329353861 0.982349394642822 0.1569844068017776 0.13199228370572677 0.404997170130854 17.434246253001348 0.07030255464924214 0.03896813306760161 6.481083985564957e-08 7.188352350675982 0.14145736170743595 ELEEYRR ddPTM_KYSE-520_SHP099_60min_R1 1 ELEEYRR 7 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;H0YG19 P35611 ADD1 Alpha-adducin 0 127.84 0.005285 290410000.0 346880.0 269780.0 200960.0 201000.0 302250.0 297220.0 205660.0 242760.0 264080.0 258970.0 False True 327637.87491186365 256819.3638519645 213914.2031473687 220102.9795671466 326035.3554327454 295364.9397318388 226450.11984817695 241917.92222060965 216129.72891505808 256675.72727561154 1.2764661403298756 1.0005596032701554 0.8334025403098336 0.857513805077509 1.270222778341083 1.150731870391016 0.8822420501219458 0.9425040878947024 0.8420341541800084 1.0 17.969587347308423 -6.780561330717039 24.988767642957292 0.9119037069596551 1.0512904211678051 0.19640006204631388 0.14511414489711158 488.2900638049058 638096.951266097 0.06588107844402862 0.044493808397688704 1.657443257518774e-07 6.780561330717039 0.13938671420815008 ELEFYLR ddPTM_KYSE-520_SHP099_60min_R1 4 ELEFYLR 7 0 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 0 ;;; 184.16 0.00091577 2589240000.0 2482570.0 2534760.0 1920990.0 1698680.0 2732100.0 2477500.0 2098490.0 1994970.0 2065960.0 2038950.0 False True 2344856.8932193997 2412986.324847675 2044820.0890926719 1860122.036473236 2947100.7264774293 2462037.0035180384 2310625.848488772 1988049.9146994986 1690833.7426134273 2020886.4892790946 1.1603110346172258 1.1940236810175584 1.0118431193144921 0.9204485488627282 1.4583207627503811 1.2182955433564773 1.14337240648931 0.9837514008066283 0.8366792254703004 1.0 20.94655685890269 -7.340024019493116 3.414717370936252 0.9169451453767923 1.1596458060526311 0.3534300010233672 0.13671433251243512 0.29802270875786524 6.681560933583764 0.09038158985828633 0.039503101129937816 4.5706291017090586e-08 7.340024019493116 0.24270066067583884 ELEKPIQS(ph)KPQSPVIQAAAVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 ELEKPIQSKPQSPVIQAAAVSPK 23 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 2 ELEKPIQS(0.725)KPQS(0.275)PVIQAAAVS(1)PK 62.11600000000001 0.022538 1006700000.0 1798200.0 1695700.0 1599700.0 1632700.0 1711900.0 1742200.0 1746700.0 1729900.0 1950200.0 1731600.0 True False 1698450.2613771704 1614236.02670241 1702819.2216104995 1787871.317110847 1846616.790621395 1731326.2835637222 1923273.4821492326 1723899.380661694 1596092.8405412985 1716259.3711644148 0.9896232993180036 0.9405548216218707 0.99216892867143 1.0417255964626408 1.0759543817485686 1.008778925057863 1.120619362354518 1.0044515471412085 0.9299834671599853 1.0 20.710836167159343 -5.05690034310278 4.250491976974208 1.0310987012594963 0.9648563034226023 0.1986650012779706 0.04877039358976837 0.3123328828076241 11.502760945838542 0.013745255738609517 0.02612988761249356 8.772020882855925e-06 5.05690034310278 -0.06624239783689401 ELEKPIQSKPQS(ph)PVIQAAAVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 ELEKPIQSKPQSPVIQAAAVSPK 23 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 2 ELEKPIQSKPQS(1)PVIQAAAVS(1)PK;ELEKPIQSKPQS(1)PVIQAAAVS(1)PK;ELEKPIQS(0.036)KPQS(0.964)PVIQAAAVS(1)PK;ELEKPIQS(0.001)KPQS(0.999)PVIQAAAVS(1)PK;ELEKPIQS(0.039)KPQS(0.961)PVIQAAAVS(1)PK;ELEKPIQS(0.04)KPQS(0.96)PVIQAAAVS(1)PK 205.44 3.6435e-16 15298800000.0 8578740.0 7951870.0 7086250.0 7506750.0 7682030.0 7887390.0 7765280.0 7582680.0 9284690.0 8014280.0 True False 8102860.190905795 7569850.229199791 7543041.013400885 8220189.263013324 8286562.05622834 7838161.873331236 8550270.284229571 7556377.452890814 7598824.34398801 7943279.714215499 1.0200899983925666 0.9529879975965836 0.949612916173865 1.034860858330629 1.0432167007034252 0.9867664435011471 1.0764156106611462 0.9512918749880764 0.9566356237448062 1.0 22.921303376500333 -2.5598117894755537 17.469691132740802 0.9975218301652851 1.0453845997340279 0.0 0.042924365595961564 0.0 0.0 0.010169901341282784 0.0 0.0027554225641648103 2.5598117894755537 0.0478627695687428 ELEKPIQSKPQSPVIQAAAVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 ELEKPIQSKPQSPVIQAAAVSPK 23 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 ELEKPIQSKPQSPVIQAAAVS(1)PK;ELEKPIQSKPQSPVIQAAAVS(1)PK;ELEKPIQSKPQSPVIQAAAVS(1)PK;ELEKPIQSKPQSPVIQAAAVS(1)PK 222.57 3.1306999999999995e-21 28818220000.0 15822460.0 14340870.0 12146000.0 12043490.0 12918240.0 12366330.0 11727720.0 12297680.0 14825510.0 12284030.0 True False 14944756.602507979 13651913.079115288 12928950.594287109 13188099.668592703 13934831.993268855 12289147.14741279 12913272.3891173 12255022.218380094 12133571.104693599 12175203.05103071 1.2274749373681129 1.1212883285720285 1.0619084166479333 1.0831934065753626 1.1445256341814505 1.009358701937413 1.0606207005331305 1.0065558797676581 0.9965805953163478 1.0 23.537442497157535 -1.0000000000000002 0.25793692229513404 0.9955573891375975 2.3576906843070944 0.73100506392664 0.037144021028445696 28.33375100811571 0.38983074212138746 0.048088556729309534 16.923572186537502 0.09999999999999995 1.0000000000000002 1.3621332951694969 ELELMFGCQVEGDAAET(ph)PPRPR ddPTM_KYSE-520_SHP099_60min_R1 2 ELELMFGCQVEGDAAETPPRPR 22 1 Q02750;Q02750-2;H3BRW9 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 1 ELELMFGCQVEGDAAET(1)PPRPR;ELELMFGCQVEGDAAET(1)PPRPR 83.881 0.011914 47400000.0 33983.0 50193.0 45954.0 34134.0 38006.0 41647.0 34918.0 41255.0 50757.0 47640.0 True False 32097.895246569005 47781.65293877101 48916.26836899971 37378.08509723867 40996.855975440594 41387.065624829746 38447.85220683965 41111.896033989404 41540.80827984554 47217.94666335917 0.6797816829141529 1.0119383902783996 1.0359677162107181 0.7916075928444348 0.8682473269693003 0.8765113383667283 0.8142635358744843 0.8706836899769718 0.8797673599830834 1.0 15.52704768492374 -8.203645485349183 6.823036877000641 0.9999999951984784 0.8748668198285476 0.13861125235581018 0.0966794840268451 43.641308258437896 1463.1776859946415 0.09334892439659095 0.024179796920220566 6.256832296860404e-09 8.203645485349183 -0.12513317536993074 ELENAEFIPMPDS(ph)PSPLSAAFSESEKDTLPYEELQGLK ddPTM_KYSE-520_SHP099_60min_R1 1 ELENAEFIPMPDSPSPLSAAFSESEKDTLPYEELQGLK 38 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 ELENAEFIPMPDS(0.86)PS(0.102)PLS(0.024)AAFS(0.007)ES(0.002)EKDT(0.002)LPY(0.002)EELQGLK 103.16 0.00025904 21452000.0 58494.0 77029.0 51187.0 57162.0 56363.0 100610.0 88602.0 115410.0 153060.0 129590.0 True False 55249.2212151019 73328.41121711371 54486.59592209577 62594.65929361805 60798.44743839814 99982.05567061546 97558.75483219001 115009.66964689645 125268.16232860816 128441.93341949432 0.43014940482604436 0.5709070960308689 0.42421189460097336 0.48733818953956765 0.4733535677933857 0.7784222255832273 0.7595553277258826 0.8954215074859719 0.9752902264362484 1.0 16.970756761474878 -6.694359323670809 0.9773331299968356 0.9809851715167082 0.4642306307190993 0.924796749974128 0.05955266584481366 0.13929692070286312 0.2659748900047836 0.042934910265867585 0.025987150804125114 2.0213460788024223e-07 6.694359323670809 -0.5167545407976089 down ELEQHIQTS(ph)DPENFQSEER ddPTM_KYSE-520_SHP099_60min_R1 2 ELEQHIQTSDPENFQSEER 19 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 ELEQHIQT(0.088)S(0.912)DPENFQSEER;ELEQHIQT(0.161)S(0.839)DPENFQSEER 162.11 3.6951e-06 319220000.0 178275.0 135516.0 147903.0 144510.0 127543.0 148278.0 134715.0 129177.0 174425.0 143065.0 True False 168385.73036759833 129005.60794633687 157437.0640331671 158244.18695148412 137579.90847959853 147352.54200106848 148333.3068917007 128728.91513713851 142753.81689642902 141797.55540288563 1.1875079925684786 0.9097872497152484 1.1102946280409796 1.1159867072592973 0.9702558558833851 1.0391754750806501 1.0460921309274 0.9078359268704207 1.0067438503493689 1.0 17.113473135092274 -6.522344190069397 0.9259943851631769 0.9740596593607013 1.0652860583712513 0.18213274017587722 0.07746637124675297 1.0355874803105765 1.832699714279817 0.05190259141327021 0.037014107736565174 3.003694850033253e-07 6.522344190069397 0.09122639901055007 ELES(ph)SEEGGSAEER ddPTM_KYSE-520_SHP099_60min_R1 1 ELESSEEGGSAEER 14 0 J3QKQ1;J9JIC5;Q9HAS0;J3KRR1 J3QKQ1 C17orf75 Protein Njmu-R1 1 ELES(0.983)S(0.017)EEGGSAEER 112.15 0.0010402 0.0 48586.0 46273.0 39819.0 42347.0 45869.0 47197.0 44158.0 56140.0 65289.0 48184.0 True False 45890.83772621021 44049.97562281097 42385.79645265264 46371.64614791018 49478.62934109048 46902.42601616178 48621.921580549446 55945.26344317451 53434.16340175416 47757.12724658475 0.9609212356778012 0.9223749032341787 0.8875281847210308 0.9709890192615459 1.036047019445225 0.9821031691037468 1.0181081732470945 1.1714537006028836 1.118873066335358 1.0 15.543428435755256 -6.351692910201521 0.8917628881422978 1.0995671228646118 0.9270117097729775 0.5636755307130015 0.05368406785103619 0.4125277389239968 0.6969685184472945 0.03610744474040034 0.03056632074554971 4.4494577759472735e-07 6.351692910201521 -0.17255541309163425 ELESPLT(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 4 ELESPLTPGK 10 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 ELESPLT(1)PGK;ELES(0.002)PLT(0.998)PGK;ELESPLT(1)PGK;ELESPLT(1)PGK 187.35 1.7845999999999998e-05 6154300000.0 11910900.0 14949400.0 9461500.0 9651200.0 10093900.0 14508900.0 10529600.0 13324100.0 14187300.0 15084100.0 True False 11250178.633209525 14231208.38449311 10071403.428935254 10568447.146260925 10888232.503565226 14418344.573296824 11594034.726992916 13277881.80696831 11611243.952728735 14950466.609252233 0.7524968234936058 0.9518905835143632 0.6736514446112655 0.7068974783516485 0.7282871356554814 0.9644076636627448 0.77549651325383 0.8881249096768105 0.776647596105329 1.0 23.833687176350576 -6.23776639091336 24.81172247313197 0.8673532350931575 0.7651172144410063 0.2694371697936693 0.09605566894011801 1166.6712103423847 1222791.9503386219 0.03169844643485351 0.0316824798957574 5.78407091693367e-07 6.23776639091336 -0.1022360206521512 ELESPLT(ph)PGKVCR ddPTM_KYSE-520_SHP099_60min_R1 2 ELESPLTPGKVCR 13 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 ELESPLT(1)PGKVCR;ELESPLT(1)PGKVCR 125.67 0.00018356 963630000.0 814420.0 1124190.0 806390.0 477180.0 592210.0 752790.0 454700.0 556160.0 1160170.0 737470.0 True False 769242.49909398 1070182.2249564086 858371.1896696194 522531.04373060144 638813.5577860246 748091.5583767277 500665.51344435505 554230.8107687196 949512.3735056921 730936.5895429784 1.0524066110508334 1.4641245769698643 1.17434426180022 0.714878761312683 0.8739657679272095 1.0234698455094107 0.6849643602564739 0.7582474577107366 1.2990352201404765 1.0 19.479386728877305 -5.085808632469695 6.0003706291655154 0.8932435959032216 1.2729006507997631 0.37208318035140886 0.19299600175004433 0.20772219327345104 11.579692389635785 0.05129260568378129 0.09088035748020065 8.207131037057366e-06 5.085808632469695 0.37965705489654156 ELESQISELQEDLESER ddPTM_KYSE-520_SHP099_60min_R1 6 ELESQISELQEDLESER 17 0 P35579 P35579 MYH9 Myosin-9 0 ;;;;; 384.88 2.4062999999999998e-85 1802062000.0 323551.0 427323.0 982653.0 4524300.0 518591.0 337123.0 354558.0 339352.0 777445.0 454183.0 False True 305602.9810470718 406793.76165510056 1045996.3846803893 4954288.111719598 559401.1613208369 335018.890307573 390400.18279261864 338174.867117352 636280.585793575 450159.2919690272 0.6788774251673084 0.9036662552843397 2.323613892551524 11.005633339365732 1.2426738074737462 0.744222981252209 0.8672489711030552 0.7512337813536011 1.413456518936754 1.0 18.78007607381044 -5.96315075837741 24.99999887897445 0.9407505058256002 3.7631825360579105 0.1977992076989803 2.6929932520355644 299.81787871348814 203407.20072782025 0.8909873742093805 1.0102823348182335 1.0885521542841555e-06 5.96315075837741 2.8224320302323105 ELEVQHPAAK ddPTM_KYSE-520_SHP099_60min_R1 1 ELEVQHPAAK 10 0 P50990-2;P50990;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 0 66.595 0.025266 0.0 549640.0 586130.0 399800.0 392540.0 526790.0 555000.0 418700.0 491560.0 484320.0 466790.0 False True 519150.37351982476 557971.4350009337 425571.7477026175 429846.8835785459 568245.3759749085 551536.0391332026 461026.28211821354 489854.89309096657 396379.696713651 462654.60375712434 1.1221121962343177 1.206021577370593 0.9198476449745351 0.9290880931214051 1.228228080646562 1.1921118576456176 0.9964804810636542 1.0587917835745158 0.856750788806016 1.0 18.81957602125986 -7.437573077673922 2.1135223988484317 0.9370756016422387 1.0896174340797327 0.22391402980751618 0.10997554615305788 0.5502151811540755 4.506212477315028 0.09414199786790353 0.033081111458724645 3.651126854639939e-08 7.437573077673922 0.15254183243749397 ELFDDPS(ph)YVNVQNLDK ddPTM_KYSE-520_SHP099_60min_R1 2 ELFDDPSYVNVQNLDK 16 0 P29353;P29353-6;P29353-2;P29353-7;Q5T188;X6R6D0;P29353-5;P29353-3;H0Y539 P29353 SHC1 SHC-transforming protein 1 1 ELFDDPS(0.6)Y(0.4)VNVQNLDK;ELFDDPS(0.584)Y(0.416)VNVQNLDK 191.06 2.0547e-09 417660000.0 794280.0 727420.0 597590.0 571310.0 553930.0 691780.0 532510.0 671670.0 811340.0 683020.0 True False 750219.7050420754 692473.6513203201 636111.607577806 625607.1306293848 597521.139569431 687462.3444172377 586341.3075967745 669340.1335389559 664021.1082169919 676968.9741815192 1.1082039704243742 1.0229030837898392 0.9396466187344681 0.9241296935147835 0.8826418378949439 1.0155005186883272 0.8661272967578508 0.9887308858551651 0.9808737675457256 1.0 19.36873019033435 -4.475243215275649 2.454857981835619 0.9452004360582826 1.1137777918108789 0.5292493918514897 0.046888237225021764 0.2638595054536952 2.63534012652997 0.012084450398433024 0.07628737081574818 3.3477790303416566e-05 4.475243215275649 0.16857735575259625 ELFDDPSY(ph)VNVQNLDK ddPTM_KYSE-520_SHP099_60min_R1 4 ELFDDPSYVNVQNLDK 16 0 P29353;P29353-6;P29353-2;P29353-7;Q5T188;X6R6D0;P29353-5;P29353-3;H0Y539 P29353 SHC1 SHC-transforming protein 1 1 ELFDDPS(0.217)Y(0.783)VNVQNLDK;ELFDDPS(0.02)Y(0.98)VNVQNLDK;ELFDDPS(0.014)Y(0.986)VNVQNLDK;ELFDDPS(0.329)Y(0.671)VNVQNLDK 297.16 2.1618e-37 3318690000.0 6023290.0 5110540.0 4364480.0 3794930.0 4182290.0 4672810.0 4133690.0 5129640.0 5652860.0 4707560.0 True False 5689166.096569066 4865021.987323075 4645821.364214902 4155599.0062126946 4511412.429025036 4643645.259499142 4551563.726126666 5111846.476106971 4626443.121004147 4665854.6808262635 1.2193191785307782 1.0426861357931407 0.9957063993669399 0.8906404700707032 0.9668994723655051 0.9952400100632391 0.9755048190486383 1.0955863021438395 0.9915531960341429 1.0 22.153709944259642 -4.269097602189974 2.3929935285881636 0.9880869987771256 1.271055492182606 0.6859530547931996 0.046829285002525374 0.3382864232103791 2.3885347582206524 0.01339717227585422 0.1969925310396735 5.3814882678517494e-05 4.269097602189974 0.28296849340548047 ELFDELVK ddPTM_KYSE-520_SHP099_60min_R1 4 ELFDELVK 8 0 A0A5F9ZH72;A0A5F9ZH31;A0A5K1VW54;A0A5K1VW94;P55263-3;P55263-2;P55263;A0A5F9ZH83 A0A5F9ZH72 ADK Adenosine kinase 0 ;;; 139.19 0.0048732 140987000.0 270886.0 351712.0 237939.0 202298.0 318306.0 383527.0 279029.0 312222.0 272982.0 309434.0 False True 255859.41358214684 334815.22758952534 253276.9286558603 221524.3410968886 343354.87128660164 381133.2657308831 307235.97438061336 311138.9747551626 223415.35011621623 306692.6554960089 0.8342534749270395 1.0916962685266598 0.8258330420278234 0.7223007696047399 1.1195405730577392 1.2427205506909926 1.0017715418836024 1.0144976385298916 0.7284665808344524 1.0 18.226434092602368 -5.778922092834122 24.998268913954345 1.0289990004850371 0.8814127832236197 0.1908656805688207 0.1486055052495095 445.17668028013605 636548.7183228335 0.04892302023970743 0.05559711181193145 1.6637110732029869e-06 5.778922092834122 -0.1475862172614174 ELFDELVKK ddPTM_KYSE-520_SHP099_60min_R1 2 ELFDELVKK 9 1 A0A5F9ZH72;A0A5F9ZH31;A0A5K1VW54;A0A5K1VW94;P55263-3;P55263-2;P55263;A0A5F9ZH83 A0A5F9ZH72 ADK Adenosine kinase 0 ; 125.48 0.0016241 190030000.0 649450.0 620320.0 453650.0 360200.0 575840.0 559290.0 389310.0 385930.0 519400.0 432300.0 False True 613423.7138535217 590518.8960806973 482893.00486566406 394433.29970192094 621155.331918584 555799.263651909 428665.2540994545 384591.2989067392 425090.0530084867 428470.15832431056 1.4316602963728904 1.378203089779082 1.1270166556153969 0.9205618922085421 1.4497050024390015 1.2971714665627252 1.0004553310688122 0.8975917959160197 0.9921112235002713 1.0 18.70883520284289 -6.815186674959826 5.639785586989802 0.9590881125705599 1.2585844301233031 0.4850002389116521 0.14873596297777497 0.1920551000132339 12.909984700955667 0.06802878546788854 0.04610736135437368 1.5304294881541202e-07 6.815186674959826 0.2994963175527432 ELFQT(ph)PGHTEEAVAAGK ddPTM_KYSE-520_SHP099_60min_R1 1 ELFQTPGHTEEAVAAGK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PGHTEEAVAAGK 147.93 9.190299999999999e-06 236880000.0 194610.0 246960.0 167760.0 149430.0 152390.0 167450.0 178540.0 209750.0 237470.0 243940.0 True False 183814.59535458297 235095.6709054826 178574.0780254903 163631.78227223243 164382.2260195074 166404.88243757628 196588.56558248342 209022.42620601784 194351.4341315469 241778.8813824479 0.7602591024640546 0.9723581710745293 0.7385842675937453 0.6767827749744539 0.6798866182174372 0.688252346466752 0.8130923778719861 0.8645189563739621 0.8038395786277137 1.0 17.88332870969629 -8.2259920735849 0.8797449009647992 0.9970271415918632 0.7609536360273326 0.4019905471392309 0.08524117947350102 1.0205233905296618 1.6066896644811057 0.09148363742591417 0.031432735164471655 5.9430300528649255e-09 8.2259920735849 -0.23607350556453066 ELFQT(ph)PGHTEELVAAGK ddPTM_KYSE-520_SHP099_60min_R1 5 ELFQTPGHTEELVAAGK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PGHTEELVAAGK;ELFQT(1)PGHTEELVAAGK;ELFQT(1)PGHTEELVAAGK;ELFQT(1)PGHTEELVAAGK;ELFQT(1)PGHTEELVAAGK 224.1 3.257e-18 2227470000.0 2016940.0 2466250.0 1895330.0 1655940.0 1430080.0 1985880.0 1629840.0 2320870.0 2563650.0 2526730.0 True False 1905056.3175297894 2347767.648083281 2017506.0044352224 1813320.0397234824 1542619.1599578513 1973485.386295218 1794600.1329055363 2312819.443665129 2098155.7843573503 2504345.1379661956 0.7607003877576176 0.937477671304494 0.805602220656239 0.7240695430646985 0.61597706185603 0.7880245244063707 0.7165945722493144 0.9235226441445661 0.8378061604005924 1.0 21.256001971259035 -7.83148072284961 1.1915582919143746 0.9865348720542745 0.7679035549418453 0.4015561600135187 0.08568649968614338 0.48588954619044783 1.4825271654802195 0.08693541489300471 0.027983954361591668 1.4740739696544384e-08 7.83148072284961 -0.21863131711242922 ELFQT(ph)PGHTEESMTDDKIT(ph)EVSCKSPQPESFK ddPTM_KYSE-520_SHP099_60min_R1 1 ELFQTPGHTEESMTDDKITEVSCKSPQPESFK 32 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 ELFQT(0.999)PGHT(0.001)EESMTDDKIT(0.468)EVS(0.317)CKS(0.216)PQPESFK 129.09 3.4605e-05 543100000.0 170040.0 185730.0 161200.0 214680.0 175890.0 107760.0 140060.0 170980.0 222180.0 187900.0 True False 160607.54223366358 176807.25201358646 171591.20992911924 235083.1226541043 189731.54232279773 107087.42986845749 154218.63165387357 170386.91028703202 181837.71270201326 186235.3521839881 0.8623901979415489 0.949375346518059 0.9213675487326304 1.262290536663833 1.0187729670967927 0.5750112887410455 0.8280846243494943 0.9149010018178563 0.9763866557535742 1.0 17.506767433367045 ELFQT(ph)PGTDKPTTDEK ddPTM_KYSE-520_SHP099_60min_R1 2 ELFQTPGTDKPTTDEK 16 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(0.706)PGT(0.294)DKPTTDEK;ELFQT(0.965)PGT(0.035)DKPTTDEK 170.38 1.0224999999999999e-07 1603140000.0 1568590.0 1674780.0 1332410.0 1080210.0 894450.0 1261890.0 1198150.0 1471220.0 1679770.0 1591350.0 True False 1481577.185793357 1594321.0549039696 1418299.2805313766 1182872.8336230216 964838.1262756635 1254014.0764356717 1319270.6948171407 1466116.6812053279 1374766.1115557668 1577251.8770515665 0.9393408924406805 1.0108221001989304 0.8992218054497879 0.7499581080443685 0.6117210195237062 0.7950626622679068 0.8364362813651028 0.9295387138457625 0.8716211605502628 1.0 20.588981637034582 -9.91522374917585 14.093942432565196 0.9999959516013851 0.8459979119077224 0.15238142692189438 0.1063689123033483 0.0 0.0 0.11802745908105697 0.02862586355967437 1.2155595811540183e-10 9.91522374917585 -0.15399803969366266 ELFQT(ph)PICTDKPTTHEK ddPTM_KYSE-520_SHP099_60min_R1 3 ELFQTPICTDKPTTHEK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PICTDKPTTHEK;ELFQT(1)PICTDKPTTHEK;ELFQT(1)PICTDKPTTHEK 203.64 1.1547e-12 5480010000.0 5635030.0 5334280.0 5879640.0 5561850.0 4578850.0 4406250.0 5282610.0 5800570.0 6364180.0 5943240.0 True False 5322443.652746191 5078013.181882485 6258651.00215662 6090446.551768824 4939179.444907286 4378748.959334551 5816627.772105309 5780449.176533219 5208605.339922122 5890587.517370749 0.9035505604578221 0.862055468475417 1.062483323386757 1.033928540032503 0.8384867265518327 0.7433467283903451 0.9874444195850854 0.9813026560571856 0.8842251005629692 1.0 22.489980102552455 -10.379077941252893 3.0722067871696552 1.0009432358653616 0.9235152479160494 0.06090222517774613 0.09183664774174084 55032522.66419166 67469081.21125568 459441.9351475181 0.02552657910065415 4.17755386877055e-11 10.379077941252893 -0.07742798794931216 ELFQT(ph)PVCTDKPTTHEK ddPTM_KYSE-520_SHP099_60min_R1 4 ELFQTPVCTDKPTTHEK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQT(1)PVCTDKPTTHEK;ELFQT(1)PVCTDKPTTHEK;ELFQT(1)PVCTDKPTTHEK;ELFQT(1)PVCTDKPTTHEK 267.55 2.2749999999999998e-29 5781000000.0 4445680.0 4327520.0 4523520.0 4751960.0 3995690.0 3587700.0 4094410.0 4771390.0 5131850.0 4463160.0 True False 4199069.268156631 4119619.443460052 4815113.3370878985 5203584.849671136 4310128.070633804 3565307.833510254 4508312.920390808 4754839.161740794 4200035.403410863 4423619.874685934 0.9492382680043806 0.9312779036540826 1.0885007015729984 1.1763182635670244 0.9743441327991169 0.8059706607958448 1.0191456427324437 1.074875169304274 0.9494566717736016 1.0 22.076795988245056 -2.9937641480251855 14.264775480685854 0.9993837422617701 0.43112409324583145 0.0 0.09644626153449239 0.0 0.0 0.023737122509096865 0.0 0.0010144621593643104 2.9937641480251855 -0.5682596490159386 ELFQTPGHTEESMTDDKIT(ph)EVSCKSPQPDPVK ddPTM_KYSE-520_SHP099_60min_R1 1 ELFQTPGHTEESMTDDKITEVSCKSPQPDPVK 32 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQTPGHTEESMTDDKIT(0.333)EVS(0.333)CKS(0.333)PQPDPVK 102.94 0.00082495 734520000.0 221030.0 281250.0 233490.0 331150.0 266020.0 271520.0 250070.0 366040.0 423820.0 295650.0 True False 208769.02528761904 267738.32783514325 248541.13899720914 362622.3964361221 286954.260553247 269825.3429647697 275349.5160480098 364770.2926743779 346864.9716327627 293030.77101221954 0.7124474490049827 0.9136867330017653 0.8481741973331697 1.2374891387123317 0.9792632342399319 0.9208089035588615 0.9396607567760438 1.2448190728036777 1.1837151792440879 1.0 18.16069264371163 -3.483383457326073 0.6021179667624446 1.0785344507041692 1.6492106425257547e-14 0.44764581939839776 0.12292773315157543 8.390855035479877 1.1594470329900224 0.0617595113906256 7.726747007970866 0.0003285614017368408 3.483383457326073 -1.0785344507041528 ELFQTPGHTEESMTDDKITEVSCKS(ph)PQPESFK ddPTM_KYSE-520_SHP099_60min_R1 1 ELFQTPGHTEESMTDDKITEVSCKSPQPESFK 32 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 ELFQTPGHTEESMTDDKIT(0.147)EVS(0.147)CKS(0.699)PQPES(0.006)FK 106.1 0.00042705 969380000.0 298060.0 337360.0 189010.0 308670.0 256910.0 256950.0 237790.0 241550.0 386640.0 225000.0 True False 281526.01763212075 321152.7192123159 201193.88702669262 338005.90399498056 277127.3553820567 255346.27973923722 261828.1338067588 240712.11942819355 316435.9224012346 223006.6750473512 1.2624107218868856 1.4401036163788608 0.9021877348916707 1.5156761739226483 1.2426863694694967 1.1450163080769638 1.1740820482219405 1.0793942350697932 1.4189526942816646 1.0 17.766727368051388 -6.09149014482334 6.161368295696546 1.170551321475439 1.2778142515751323 0.08584766367504848 0.18005241784311224 0.6803114274955934 37.613560388525045 0.05742945027720228 0.05773184557384474 8.100463233530961e-07 6.09149014482334 0.10726293009969323 ELFS(ph)PLHALNFGIGGDTTR ddPTM_KYSE-520_SHP099_60min_R1 8 ELFSPLHALNFGIGGDTTR 19 0 P68402-3;P68402-2;P68402-4;P68402 P68402-3 PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta 1 ELFS(1)PLHALNFGIGGDTTR;ELFS(1)PLHALNFGIGGDTTR;ELFS(1)PLHALNFGIGGDTTR;ELFS(1)PLHALNFGIGGDTTR;ELFS(1)PLHALNFGIGGDTTR;ELFS(1)PLHALNFGIGGDTTR;ELFS(1)PLHALNFGIGGDTTR;ELFS(1)PLHALNFGIGGDTTR 206.46 4.0084e-14 1258921000.0 734304.0 775011.0 633570.0 569501.0 617245.0 769041.0 585909.0 674676.0 855719.0 629816.0 True False 693570.6933212673 737778.3082447717 674410.9359478427 623626.2038132806 665818.6698563611 764241.1298577262 645138.3996407939 672335.7064265615 700342.0005205416 624236.3202294334 1.1110707128773771 1.1818894292687212 1.080377597541854 0.9990226194849916 1.0666131531911576 1.224281742492707 1.0334842410381988 1.0770531682287399 1.1219180586338457 1.0 19.251732775126296 -8.291673960575833 0.010195627909308377 1.3478161579979603e-05 2.1358815411248897 0.1453689532585093 0.06425794411114842 4326.764108614941 22.216453919562287 2372.7185241665043 2278.4479857784495 5.108883970864237e-09 8.291673960575833 2.1358680629633096 ELGHHHGEAHK ddPTM_KYSE-520_SHP099_60min_R1 4 ELGHHHGEAHK 11 0 Q9HCJ3;Q9HCJ3-2;E9PE10 Q9HCJ3 RAVER2 Ribonucleoprotein PTB-binding 2 0 ;;; 156.01 3.7073e-05 268726000.0 519646.0 389464.0 160406.0 191546.0 280808.0 411671.0 247192.0 321794.0 288102.0 182426.0 False True 490820.20049138134 370753.5648426177 170746.02741867432 209750.47424959508 302905.9920210369 409101.60858739616 272180.5797214359 320677.7717212843 235789.93926039868 180809.8475652802 2.714565645071815 2.0505164394254556 0.9443403095455164 1.1600611198671913 1.6752737536138607 2.2626068994372264 1.5053415695357353 1.7735636418005702 1.3040768654775194 1.0 17.464113728775665 -4.498896512127709 4.6460168617025355 1.5059162200383285 2.607023621375874 0.5218244851303577 0.37779005916436137 0.16401497860320785 8.79329354687973 0.10196166958648134 0.38487545898910247 3.170322828102249e-05 4.498896512127709 1.1011074013375457 ELGITALHIK ddPTM_KYSE-520_SHP099_60min_R1 2 ELGITALHIK 10 0 E5RH77;A0A2R8Y811;P62263 E5RH77 RPS14 40S ribosomal protein S14 0 ; 136.63 0.00046622 1283420000.0 1769210.0 1587490.0 1211830.0 1347100.0 1758170.0 1590610.0 1157520.0 1437550.0 1209030.0 1316600.0 False True 1671068.3944673042 1511224.5975289317 1289946.5007965546 1475127.9789796153 1896527.9763811105 1580682.4129831803 1274533.4179065528 1432563.4745766928 989500.6291660579 1304935.9482992988 1.2805750325486702 1.158083352289042 0.9885132695422487 1.1304217505097665 1.4533494757752852 1.2113103444220823 0.9767018983327349 1.0978036710872505 0.7582752474982833 1.0 20.315547564365474 -6.771095260606351 9.003072469695708 0.9659607712718631 1.199961951271858 0.4397279954516844 0.1356155982323999 0.166632840182061 109.47122121430723 0.05855785371049986 0.04123819555698088 1.6939661955740031e-07 6.771095260606351 0.23400117999999492 ELGNDAYK ddPTM_KYSE-520_SHP099_60min_R1 1 ELGNDAYK 8 0 P31948;P31948-2;P31948-3 P31948 STIP1 Stress-induced-phosphoprotein 1 0 93.649 0.045908 0.0 374180.0 450270.0 290650.0 294500.0 377990.0 436830.0 335300.0 368290.0 351360.0 358210.0 False True 353423.48949066305 428638.353330951 309385.7640564427 322489.19145534624 407735.6625310953 434103.58193613915 369195.3962126507 367012.487949532 287561.88106480957 355036.53808316286 0.9954566687665201 1.2073077200593587 0.871419504389075 0.9083267688347254 1.1484329605410595 1.2227011458591224 1.0398800027905053 1.0337315982490904 0.8099501043395477 1.0 18.43760797961422 -7.621190114302747 7.490414104435896 0.9063282228908688 1.057593417510706 0.2062381130573685 0.11711034502699892 0.3727922478657834 24.629784424224038 0.08399495748725144 0.0312484019155834 2.392268301280182e-08 7.621190114302747 0.15126519461983723 ELGS(ph)PEGVLVCPSIEELK ddPTM_KYSE-520_SHP099_60min_R1 2 ELGSPEGVLVCPSIEELK 18 0 Q504Q3-2;Q504Q3-3;Q504Q3 Q504Q3-2 PAN2 PAB-dependent poly(A)-specific ribonuclease subunit PAN2 1 ELGS(1)PEGVLVCPSIEELK;ELGS(1)PEGVLVCPSIEELK 160.25 2.0946000000000002e-06 0.0 92368.0 98079.0 73983.0 71545.0 73579.0 78819.0 79768.0 82415.0 115673.0 92694.0 True False 87244.16290895709 93367.1376204197 78752.0625569853 78344.6152892113 79369.24869275748 78327.06138457649 87831.72790065821 82129.12160080559 94669.6990790348 91872.80327484083 0.9496190363100493 1.016265252526458 0.857185801998396 0.8527508957666236 0.8639036348474258 0.852559828290623 0.9560144544398673 0.8939437861182198 1.0304431312042037 1.0 16.48735022923064 -7.759878538703814 24.999819998667505 1.0152216039065896 0.9041802572788947 0.41701232861814863 0.05198367952626958 41.316969614664686 661860.2514211397 0.04331820155121876 0.01439388304564637 1.7382869161140437e-08 7.759878538703814 -0.11104134662769483 ELHDLFNLPHDRPYFK ddPTM_KYSE-520_SHP099_60min_R1 2 ELHDLFNLPHDRPYFK 16 1 H0YA18;D6RGX2;Q9NUQ7 H0YA18 UFSP2 Ufm1-specific protease 2 0 ; 193.69 1.1061e-11 672950000.0 474980.0 417420.0 353990.0 373800.0 585240.0 408010.0 363830.0 378660.0 382890.0 242870.0 False True 448631.9125508444 397366.5166398063 376808.7618040259 409325.83961293224 631295.0584399003 405463.45824637526 400609.48703861795 377346.51683990867 313366.8278714278 240718.36075000098 1.86372120162771 1.6507528358108623 1.5653511457539466 1.7004346421170558 2.622546350319884 1.6843894125196 1.6642248883319397 1.56758510511711 1.3017986118511176 1.0 17.876986661752866 -7.737662662050621 1.1670344416472482 1.0114637590189728 1.8430599723004797 0.4992284793611832 0.278755194434034 0.4085623109590971 1.1316522661070263 0.27981136158869174 0.09215286429416458 1.8295207433926547e-08 7.737662662050621 0.8315962132815069 ELHENVLDKELEENDS(ph)ENS(ph)EFEDDGS(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 3 ELHENVLDKELEENDSENSEFEDDGSEK 28 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 3 ELHENVLDKELEENDS(1)ENS(1)EFEDDGS(1)EK;ELHENVLDKELEENDS(1)ENS(1)EFEDDGS(1)EK;ELHENVLDKELEENDS(1)ENS(1)EFEDDGS(1)EK 249.39 3.9289e-31 1784850000.0 612170.0 577260.0 540590.0 610070.0 607070.0 575310.0 569410.0 635140.0 676550.0 584040.0 True False 578211.7097693591 549527.563115075 575437.296374582 668050.8693757656 654842.955244191 571719.2768895912 626971.5197060708 632936.84758279 553705.5744376044 578865.8599762443 0.9988699450907124 0.9493176245315741 0.9940771017281914 1.1540685253111684 1.1312516431199875 0.9876541638041215 1.0831032939683136 1.0934084929602943 0.9565352056870785 1.0 19.142869547059284 -5.022144766386844 23.957894724095322 1.063908747596588 0.9734946510503624 0.25559346416217643 0.06046413640502718 530.51399980686 573952.4181728298 0.016474965871365085 0.028885736558190482 9.502879747847747e-06 5.022144766386844 -0.09041409654622568 ELHINLIPNK ddPTM_KYSE-520_SHP099_60min_R1 1 ELHINLIPNK 10 0 P07900;P07900-2;G3V2J8;Q14568 P07900 HSP90AA1;HSP90AA2P Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 118.28 0.00093447 1166700000.0 1775100.0 1492600.0 1138000.0 1316900.0 2044100.0 1803300.0 1364700.0 1723300.0 1435900.0 1579400.0 False True 1676631.6644258774 1420893.2555617227 1211357.3008643799 1442057.780059578 2204959.040661954 1792044.935799831 1502657.1941885005 1717322.2745212421 1175176.7560933493 1565407.744754607 1.0710510855998772 0.9076825257335503 0.7738286110589493 0.9212026610265905 1.4085525308344522 1.1447783759883925 0.959914245488837 1.097044703065813 0.7507160738351718 1.0 20.57810705697235 -3.9279653820632174 18.682672581351728 1.005153314325349 2.53305554552124 0.01300089620985323 0.1809809214243816 1088.2939102294492 355108.75641217805 0.04668825673906128 17665.598252108033 0.00011804147236390175 3.9279653820632174 1.5279022311958907 ELHINLIPNKQDR ddPTM_KYSE-520_SHP099_60min_R1 4 ELHINLIPNKQDR 13 1 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;;; 148.41 7.1859e-06 24344010000.0 12303210.0 11412140.0 8534830.0 7250660.0 12040500.0 10613290.0 7982510.0 8967800.0 9778520.0 7852870.0 False True 11620726.415458914 10863883.66442862 9084998.798010824 7939760.546409572 12988018.848926287 10547048.52030998 8789460.012590066 8936692.794900244 8002987.264429245 7783299.681240411 1.493033403746178 1.395794085972707 1.167242579635963 1.0201021252652354 1.6687034266752543 1.3550870392066305 1.1292716935690834 1.1481881927840687 1.0282255074564755 1.0 22.891950475762037 -6.837225138600826 4.175676703844601 1.0795543592956072 1.3435167144921485 0.3924271347091447 0.1675612167732718 0.27238240970572697 9.073891805843168 0.07768130823958327 0.05194507881246318 1.4547047649862193e-07 6.837225138600826 0.2639623551965413 ELHPQLLS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 7 ELHPQLLSPTK 11 0 E9PK89;Q8TBN0 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 ELHPQLLS(0.989)PT(0.011)K;ELHPQLLS(0.979)PT(0.021)K;ELHPQLLS(0.985)PT(0.015)K;ELHPQLLS(0.989)PT(0.011)K;ELHPQLLS(0.981)PT(0.019)K;ELHPQLLS(1)PTK;ELHPQLLS(0.998)PT(0.002)K 211.82 1.3008e-09 13628970000.0 16147380.0 14668260.0 13745910.0 12933060.0 13477840.0 15825210.0 14156770.0 15801500.0 17728090.0 15564350.0 True False 15251652.64239601 13963574.772092884 14631993.352833627 14162214.133933729 14538469.329580376 15726438.994326398 15587874.468360784 15746688.284597842 14509115.744780952 15426461.967881085 0.9886682166105851 0.9051702717814345 0.9484996224862451 0.9180468057692293 0.9424370513375284 1.0194456141058064 1.0104633519218968 1.0207582475737786 0.940534244014596 1.0 23.87890388446892 -6.2179048997771895 8.415782722668792 1.0002790090624352 0.9376692508553839 0.48857716141685836 0.029395337214547956 0.2818861007362972 51.32501245805645 0.009376707880058814 0.009337992947252332 6.054734446067339e-07 6.2179048997771895 -0.06260975820705128 ELHSEFSEVMNEIWASDQIR ddPTM_KYSE-520_SHP099_60min_R1 2 ELHSEFSEVMNEIWASDQIR 20 0 A0A2R8Y4F5;H0YFD6;P40939;A0A2R8Y688;A0A2R8YG21 A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase 0 ; 190.71 9.6845e-13 69380000.0 63781.0 67980.0 39522.0 95594.0 59869.0 50186.0 51312.0 64278.0 68188.0 43448.0 False True 60242.94078572872 64714.13875993964 42069.651357435854 104679.22501861583 64580.349691986856 49872.77055844854 56499.117716861154 64055.03462059801 55806.77807959706 43063.08452203251 1.398946254184519 1.5027752767414913 0.9769307476316894 2.430834348734551 1.4996684610213045 1.1581327977779194 1.3120081467446745 1.4874697279946427 1.2959308117151815 1.0 15.394164040096465 -6.01611531117597 24.663872983448805 1.289883482415413 1.5836666704032636 0.15864711534093423 0.3560117521432253 1312.2157229588267 2008296.7353030622 0.11768912695077832 0.1210257197364344 9.635731476931242e-07 6.01611531117597 0.2937831879878505 ELHYLPFPS(ph)P ddPTM_KYSE-520_SHP099_60min_R1 8 ELHYLPFPSP 10 0 Q8N565 Q8N565 MREG Melanoregulin 1 ELHYLPFPS(1)P;ELHYLPFPS(1)P;ELHYLPFPS(1)P;ELHYLPFPS(1)P;ELHYLPFPS(1)P;ELHYLPFPS(1)P;ELHYLPFPS(1)P;ELHYLPFPS(1)P 130.98 0.00034726 737378000.0 532890.0 641286.0 555172.0 670367.0 783331.0 792297.0 786599.0 857288.0 1037227.0 751845.0 True False 503329.52941012214 610477.6579700902 590959.2754266068 734078.4781268119 844974.6931562865 787351.9805353493 866116.1033864439 854314.2680205243 848892.7231648708 745184.2382265589 0.6754430697675258 0.819230502543837 0.7930378087880825 0.9850966250625788 1.133913802534546 1.0565870024427035 1.1622845183195059 1.1464470451678912 1.139171602965093 1.0 19.507237633857446 -5.342369710253867 1.6210628718701408 1.118474243532752 0.7379350179102778 0.8817817227475053 0.05634689493466381 0.11465294344973252 0.5900325640177574 0.01758139018520175 0.03528036986585569 4.546008984907162e-06 5.342369710253867 -0.3805392256224741 ELIIGDR ddPTM_KYSE-520_SHP099_60min_R1 3 ELIIGDR 7 0 P25705-2;P25705-3;P25705;K7EK77;K7ENJ4 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 ;; 111.82 0.022075 714910000.0 1224000.0 1340850.0 1182840.0 858620.0 1143930.0 1181180.0 990000.0 1059130.0 1344520.0 1042960.0 False True 1156102.2800164938 1276433.553343119 1259087.7590109142 940222.9866464848 1233950.7829286382 1173807.8174835257 1090078.8614689063 1055456.1252328008 1100389.0605910101 1033720.1858106015 1.1183899626666622 1.2347960026940865 1.2180160320885953 0.9095527005784453 1.1936990298404824 1.135517941504715 1.0545202429360616 1.0210269081716297 1.0644941210354035 1.0 19.979414289624263 -4.976706224432055 0.22172311201191786 0.9874535539838296 1.2989100334054924 0.25942729806574805 0.08521904308567513 12.359723611272916 0.7318999876066845 0.17373325254430813 1.0673686356330119 1.0551003705684772e-05 4.976706224432055 0.31145647942166277 ELINQDES(ph)VIR ddPTM_KYSE-520_SHP099_60min_R1 1 ELINQDESVIR 11 0 A0A494C0Q2 A0A494C0Q2 1 ELINQDES(1)VIR 66.262 0.023518 124520000.0 41301.0 39318.0 39196.0 32355.0 44629.0 41358.0 33718.0 41333.0 55143.0 41145.0 True False 39009.9511984977 37429.104262478824 41722.63687581736 35430.00947211454 48141.04839572536 41099.86938102887 37126.544495968265 41189.62547019475 45130.42124190797 40780.48731032562 0.9565837431427746 0.917818955365984 1.0231029501516817 0.8687980896967767 1.1804922297614635 1.007831737474662 0.9103997265517675 1.0100326942332918 1.106667041481894 1.0 15.31559139462906 -5.710143468569949 24.999996037204 1.028729772611795 0.9457025883729648 0.2672337175759282 0.07584263392701536 168.49495299991239 82118.03199612135 0.0228200094617174 0.029460473391601478 1.949200577724609e-06 5.710143468569949 -0.08302718423883015 ELISNASDALDK ddPTM_KYSE-520_SHP099_60min_R1 2 ELISNASDALDK 12 0 P08238;P14625;Q96GW1;A0A1W2PRR1;F8W026 P08238;P14625 HSP90AB1;HSP90B1 Heat shock protein HSP 90-beta;Endoplasmin 0 ; 178.32 6.7691999999999995e-06 1552880000.0 1368570.0 1627100.0 2307700.0 1020810.0 1848200.0 1853650.0 1320270.0 1558790.0 1849850.0 1974420.0 False True 1292652.693923342 1548931.6736731075 2456458.034450548 1117827.4754822825 1993642.8251804814 1842080.6827734455 1453735.7761934872 1553382.92131432 1513963.8709236628 1956928.174875514 0.6605519356915445 0.7915117649995711 1.2552622349600593 0.5712153822678703 1.0187613683406151 0.9413123621109015 0.742866189397045 0.7937863746139457 0.7736430444208666 1.0 20.90015937503212 -9.852575456797018 9.283260463687554 0.9999852718718591 0.8459249307969784 0.06356467766529161 0.18381558837303782 0.0 0.0 0.1729506366386552 0.04194669075758795 1.4041856911620514e-10 9.852575456797018 -0.15406034107488076 ELKDDLK ddPTM_KYSE-520_SHP099_60min_R1 4 ELKDDLK 7 1 P12429;D6RA82;D6RFG5;D6RAZ8;D6RCA8 P12429 ANXA3 Annexin A3;Annexin 0 ;;; 117.04 0.0029343000000000004 11169160000.0 14433580.0 13924930.0 8544040.0 8666730.0 13168540.0 14448690.0 10306960.0 12927510.0 11625960.0 12260180.0 False True 13632920.54477162 13255955.46105393 9094802.48934735 9490413.413452609 14204829.17925665 14358510.366240565 11348888.10303592 12882667.485113524 9514978.730601748 12151564.343475696 1.121906625305513 1.0908846866429336 0.7484470502952524 0.7810034284637691 1.1689712351219514 1.1816182641496527 0.9339446166969653 1.0601653516347767 0.7830250049830367 1.0 23.534638716750262 ELKTDS(ph)SPNQAR ddPTM_KYSE-520_SHP099_60min_R1 6 ELKTDSSPNQAR 12 1 P26599;P26599-2;P26599-3;A6NLN1;K7ES59;A0A087WU68 P26599 PTBP1 Polypyrimidine tract-binding protein 1 1 ELKT(0.003)DS(0.831)S(0.166)PNQAR;ELKTDS(0.5)S(0.5)PNQAR;ELKT(0.11)DS(0.445)S(0.445)PNQAR;ELKT(0.081)DS(0.46)S(0.46)PNQAR;ELKT(0.001)DS(0.499)S(0.499)PNQAR;ELKTDS(0.638)S(0.362)PNQAR 142.45 4.9946000000000006e-05 3518120000.0 4884770.0 5693560.0 5582260.0 3394450.0 3915420.0 3692910.0 2835490.0 2695020.0 6371130.0 3367440.0 True False 4613802.070552424 5420032.831392211 5942101.411531795 3717057.5074213957 4223541.27830763 3669861.178874592 3122129.000915628 2685671.6046423935 5214293.395117367 3337607.1014286755 1.3823682447755663 1.6239277622198687 1.7803477853903942 1.1136893572135242 1.2654399244595707 1.0995485889587464 0.935439345026318 0.8046697897702763 1.5622849654428672 1.0 21.67038270192088 -5.276456816090827 23.824621085111843 1.1020130042521068 1.5983858881386879 0.5242877044258112 0.21111457649452947 318.57108103868694 505400.94951399363 0.05953412971162582 0.08876533899571727 5.291066061112031e-06 5.276456816090827 0.4963728838865811 ELKTDSS(ph)PNQAR ddPTM_KYSE-520_SHP099_60min_R1 3 ELKTDSSPNQAR 12 1 P26599;P26599-2;P26599-3;A6NLN1;K7ES59;A0A087WU68 P26599 PTBP1 Polypyrimidine tract-binding protein 1 1 ELKT(0.014)DS(0.076)S(0.91)PNQAR;ELKT(0.043)DS(0.11)S(0.847)PNQAR;ELKT(0.003)DS(0.098)S(0.898)PNQAR 187.16 3.0075e-06 3519500000.0 3463080.0 4131340.0 3919790.0 2209720.0 2591990.0 2436410.0 1879660.0 1798500.0 4433880.0 2260170.0 True False 3270976.0489211692 3932864.225132239 4172465.9352857457 2419731.1244234545 2795964.866594281 2421203.4614496008 2069674.3765137796 1792261.4232730572 3628799.1610190007 2240146.6521856496 1.4601615683195417 1.755628017163542 1.8625860638252345 1.0801663909202504 1.2481168872878634 1.0808236412054983 0.9239012876654549 0.8000643268262803 1.6198935714670648 1.0 21.095161751363936 -5.270246033794908 24.609659728692847 1.096325155665215 1.6990754995230941 0.5840722413230506 0.22615455717366637 337.638269109917 943509.4785309822 0.06305825997516523 0.09517423705902513 5.367276466348496e-06 5.270246033794908 0.6027503438578792 ELLDT(ph)SFEDLSKPK ddPTM_KYSE-520_SHP099_60min_R1 3 ELLDTSFEDLSKPK 14 1 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 1 ELLDT(0.5)S(0.5)FEDLSKPK;ELLDT(0.5)S(0.5)FEDLSKPK;ELLDT(0.585)S(0.415)FEDLSKPK 196.64 1.6258000000000002e-10 1115060000.0 4006460.0 3758040.0 3703300.0 3558700.0 3613870.0 3650240.0 3649490.0 3839020.0 4079050.0 3943220.0 True False 3784213.677119995 3577498.117466956 3942020.6434894996 3896917.778037834 3898261.0088924263 3627457.498172223 4018416.064790063 3825703.335654003 3338397.34448261 3908286.1385787376 0.9682539975172181 0.9153623840776218 1.0086315340572862 0.9970912159095296 0.9974349038604535 0.9281453224126934 1.0281785729873336 0.9788698165905616 0.854184475268904 1.0 21.89810466498169 -10.804518551125804 6.93139466882528 1.0014519030223377 0.9671226593511828 0.042395407486194525 0.049356282034771826 0.0011423913414711035 3.221813795748588e-05 0.049299268190727066 0.011456684047456882 1.5684888973900935e-11 10.804518551125804 -0.03432924367115486 ELLDTS(ph)FEDLSKPK ddPTM_KYSE-520_SHP099_60min_R1 8 ELLDTSFEDLSKPK 14 1 P78345 P78345 RPP38 Ribonuclease P protein subunit p38 1 ELLDT(0.171)S(0.829)FEDLSKPK;ELLDT(0.231)S(0.769)FEDLSKPK;ELLDT(0.134)S(0.866)FEDLSKPK;ELLDT(0.197)S(0.803)FEDLSKPK;ELLDT(0.107)S(0.893)FEDLSKPK;ELLDT(0.011)S(0.989)FEDLSKPK;ELLDT(0.359)S(0.641)FEDLSKPK;ELLDT(0.028)S(0.972)FEDLSKPK 214.54 5.4812e-14 17723050000.0 13553620.0 13187260.0 11680170.0 11789130.0 11686230.0 11863440.0 11703440.0 12456660.0 14080280.0 12870080.0 True False 12801773.68012838 12553724.235119194 12433092.44713278 12909565.370668821 12605869.81544685 11789395.870440375 12886537.92976734 12413450.753866302 11523656.086974086 12756061.103970725 1.0035835965181623 0.9841379821559064 0.9746811610413647 1.012033829678843 0.9882258882816795 0.9242191436955844 1.0102286140473253 0.9731413680671556 0.9033867110739212 1.0 23.604679577715885 -6.03081771655701 24.695228076101433 0.9627079147801705 0.9926492949701231 0.19377478253321634 0.031062484694836617 1036.0374715156706 830207.6828954207 0.010075814727980702 0.010087112438538045 9.314987650145853e-07 6.03081771655701 0.029941380189952627 ELLELGIDNEDS(ph)EHENDDDTNQSATLNDKDDDSLPAETGQNHPFFR ddPTM_KYSE-520_SHP099_60min_R1 3 ELLELGIDNEDSEHENDDDTNQSATLNDKDDDSLPAETGQNHPFFR 46 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 ELLELGIDNEDS(0.998)EHENDDDT(0.002)NQSATLNDKDDDSLPAETGQNHPFFR;ELLELGIDNEDS(1)EHENDDDTNQSATLNDKDDDSLPAETGQNHPFFR;ELLELGIDNEDS(1)EHENDDDTNQSATLNDKDDDSLPAETGQNHPFFR 167.45 2.7341e-12 2993510000.0 513160.0 617050.0 612880.0 502790.0 512410.0 441180.0 414240.0 445480.0 762420.0 498620.0 True False 484693.9918409012 587405.9917890674 652387.2254426713 550575.0104306738 552733.7517859163 438426.431972588 456115.4217928077 443934.73385581316 623983.7470441483 494202.6147204894 0.9807596669941415 1.1885934519413497 1.3200804811841147 1.1140673764789113 1.118435506656578 0.8871390375393962 0.9229320286999634 0.8982848747307687 1.262607134114538 1.0 18.91474311811505 -6.080941622173164 5.287177578461418 0.9835959836971677 1.1605617978905212 0.26056503628001604 0.1262045320552412 0.28950789859180753 13.883653680238213 0.04267535352731366 0.04316103292708449 8.299623234805909e-07 6.080941622173164 0.17696581419335344 ELLS(ph)PGVK ddPTM_KYSE-520_SHP099_60min_R1 2 ELLSPGVK 8 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 ELLS(1)PGVK;ELLS(1)PGVK 138.22 0.00066614 741890000.0 1187850.0 1132510.0 1074180.0 902800.0 908530.0 1151440.0 919980.0 1132130.0 1322160.0 1223770.0 True False 1121957.5925797303 1078102.5196678347 1143423.3615487693 988601.8405632827 980026.1421714216 1144253.4358550184 1012980.556539561 1128202.9052711283 1082089.07294128 1212928.3498786541 0.924999067498072 0.8888427084548663 0.9426965423498936 0.8150537834012918 0.8079835402226908 0.943380897947924 0.8351528403478271 0.9301480218382214 0.8921294263173387 1.0 20.21006289939694 -8.556669119604367 0.9062414207523876 1.0003482340486762 0.8808092105052985 0.33505658944595096 0.04843110470730156 2.3964071390805914 2.859132837573528 0.04993244440693717 0.015803857172321974 2.7754338476196813e-09 8.556669119604367 -0.11953902354337775 ELLS(ph)PLS(ph)EPDDRYPLIVK ddPTM_KYSE-520_SHP099_60min_R1 12 ELLSPLSEPDDRYPLIVK 18 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 2 ELLS(1)PLS(1)EPDDRYPLIVK;ELLS(1)PLS(1)EPDDRYPLIVK;ELLS(1)PLS(1)EPDDRYPLIVK;ELLS(1)PLS(1)EPDDRYPLIVK;ELLS(1)PLS(1)EPDDRYPLIVK;ELLS(1)PLS(1)EPDDRYPLIVK;ELLS(1)PLS(1)EPDDRYPLIVK;ELLS(1)PLS(1)EPDDRYPLIVK;ELLS(1)PLS(1)EPDDRYPLIVK;ELLS(1)PLS(1)EPDDRYPLIVK;ELLS(1)PLS(1)EPDDRYPLIVK;ELLS(1)PLS(1)EPDDRYPLIVK 180.63 2.2012e-09 10257050000.0 11915960.0 11334960.0 10686640.0 10422510.0 10643200.0 10921170.0 10403070.0 10766820.0 13870740.0 11531510.0 True False 11254957.944922663 10790411.507478174 11375517.91362856 11413062.216758106 11480759.288475754 10853006.927027691 11454713.839779118 10729472.414414689 11352163.268900549 11429349.792779034 0.9847417525040182 0.9440967074343515 0.9952900313555471 0.9985749341549405 1.0044980245270996 0.9495734336422644 1.0022192029695434 0.9387648999240078 0.9932466391108923 1.0 23.446239996249034 -5.851353822453171 0.0013229558037613713 1.9579193792182468 2.9350861067453287e-06 0.024832206430147385 0.024536411573719035 1113436.9187970485 459.0604323086524 338134.38676060055 341253.11782519 1.4081411095286606e-06 5.851353822453171 -1.95791644413214 ELLS(ph)PLSEPDDRYPLIVK ddPTM_KYSE-520_SHP099_60min_R1 4 ELLSPLSEPDDRYPLIVK 18 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 ELLS(0.999)PLS(0.001)EPDDRYPLIVK;ELLS(0.999)PLS(0.001)EPDDRYPLIVK;ELLS(0.926)PLS(0.074)EPDDRYPLIVK;ELLS(0.796)PLS(0.204)EPDDRYPLIVK 297.76 2.2975999999999996e-38 17986200000.0 14878100.0 14145500.0 13308500.0 10900630.0 11469330.0 12878100.0 11411600.0 12997500.0 16488300.0 14421900.0 True False 14052782.134242967 13465928.94717161 14166387.204352874 11936622.59780609 12371901.019439038 12797723.001011366 12565195.89448339 12952414.706139302 13494440.356218396 14294133.186068418 0.9831153768693942 0.9420598487424193 0.9910630480314785 0.8350714550106443 0.865522998729097 0.8953129815163953 0.879045670760217 0.9061350231970132 0.9440544718983428 1.0 23.768919800019855 -5.2400191145205754 24.97640702680215 0.8967268487477182 0.969077471704622 0.327498879935878 0.04415182513096227 879.3772694472467 1025368.0870107912 0.011673979370415635 0.02019396270397182 5.754146111657919e-06 5.2400191145205754 0.07235062295690375 ELLTFLESSTGSPEEPNKFHS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 1 ELLTFLESSTGSPEEPNKFHSLPR 24 1 Q9C0D6 Q9C0D6 FHDC1 FH2 domain-containing protein 1 1 ELLTFLESSTGS(0.004)PEEPNKFHS(0.996)LPR 85.945 0.0031158 83860000.0 107330.0 109230.0 96827.0 78913.0 90214.0 93090.0 66947.0 91554.0 109980.0 75356.0 True False 101376.19094294956 103982.42684242739 103068.62334867772 86412.8677939414 97313.32855255484 92508.99078001788 73714.65609975648 91236.42054286429 90010.40437018363 74688.40446608077 1.3573216842379978 1.3922164703578626 1.37998159266457 1.1569783611214404 1.3029241854637426 1.2385991030512669 0.9869625228536444 1.2215607120687482 1.2051456315559834 1.0 16.18859665847016 -1.0000001629247133 0.12929831225524746 0.9510179425941946 2.502838192516669 0.6017515857678819 0.08654159253278437 58.86381838052818 0.5167421223758663 0.4871718544360543 16.63894502135075 0.09999996248520543 1.0000001629247133 1.5518202499224745 ELLTLDEKDPR ddPTM_KYSE-520_SHP099_60min_R1 3 ELLTLDEKDPR 11 1 P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4 P46781 RPS9 40S ribosomal protein S9 0 ;; 82.417 0.0079067 2720340000.0 8697600.0 7762800.0 5463000.0 4987800.0 7992300.0 7528900.0 5563300.0 6398300.0 6467300.0 6341300.0 False True 8215126.789764254 7389863.435799646 5815153.7211090475 5461839.012363247 8621248.540033527 7481909.342396352 6125692.656575724 6376105.790674442 5293001.347365781 6285121.015456745 1.3070753561564086 1.1757710659231624 0.9252254183822514 0.869010954432089 1.37169173335432 1.1904161151386574 0.9746340033089346 1.0144762169246928 0.842147881377131 1.0 22.58350909228635 -6.83213608147672 6.914794412800009 0.9569293428176496 1.129746578652085 0.2607166058867245 0.14971004495619505 0.3722837775531298 29.59216980969127 0.06826439891187273 0.0460285112386779 1.4718512415102373e-07 6.83213608147672 0.17281723583443542 ELLTTMGDR ddPTM_KYSE-520_SHP099_60min_R1 1 ELLTTMGDR 9 0 J3QRS3;P19105;O14950;P24844;P24844-2 J3QRS3 MYL12A;MYL12B;MYL9 Myosin regulatory light chain 12A;Myosin regulatory light chain 12B;Myosin regulatory light polypeptide 9 0 138.54 0.0064987 0.0 115420.0 122500.0 121600.0 99105.0 118760.0 143680.0 107400.0 118660.0 130620.0 126220.0 False True 109017.42251593438 116614.91612375133 129438.53056687898 108523.90940299524 128105.73634803257 142783.23982461018 118257.04012299032 118248.39615545218 106902.70066224222 125101.78899767401 0.8714297644293585 0.9321602597219415 1.0346657038556466 0.8674848718990981 1.0240120255227878 1.1413365145982437 0.9452865628099775 0.9452174673349455 0.854525754737447 1.0 16.93274289511255 -2.534968902940758 18.16465776348403 0.9649588940477833 0.5120152563420213 0.0 0.08542838644477473 0.0 0.0 0.02016724510576308 0.0 0.0029176359198302975 2.534968902940758 -0.45294363770576207 ELLTTMGDRFT(ph)DEEVDELYR ddPTM_KYSE-520_SHP099_60min_R1 4 ELLTTMGDRFTDEEVDELYR 20 1 J3QRS3;P19105;O14950 J3QRS3 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B 1 ELLTTMGDRFT(1)DEEVDELYR;ELLT(0.001)T(0.005)MGDRFT(0.994)DEEVDELYR;ELLTTMGDRFT(1)DEEVDELYR;ELLTTMGDRFT(1)DEEVDELYR 186.34 1.9563e-12 1337866000.0 554280.0 607570.0 531810.0 653289.0 575480.0 546220.0 501560.0 540320.0 639240.0 557870.0 True False 523532.98347021354 578381.4252188371 566091.3235260859 715377.3901415004 620767.0019667035 542810.8383699793 552262.579553883 538445.7560316365 523170.1299290437 552927.7058162922 0.9468380368050413 1.0460344438066589 1.023807122651523 1.2937991397724993 1.1226910777608068 0.9817030918510815 0.9987970827733669 0.9738086016809813 0.9461817963284782 1.0 19.076731337756776 -6.272443075111209 23.309633239282366 0.9796298151868197 1.092397229913547 0.28301258445551125 0.0845347986767737 416.92167190435305 883179.9980951488 0.03213555387903961 0.02865911330686084 5.34019265241986e-07 6.272443075111209 0.11276741472672724 ELMWLNEK ddPTM_KYSE-520_SHP099_60min_R1 1 ELMWLNEK 8 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 120.07 0.0071714 178790000.0 268540.0 269950.0 138190.0 151990.0 255330.0 267690.0 272140.0 212660.0 155710.0 230510.0 False True 253643.5508787817 256981.1967967894 147097.9485118177 166435.08390254015 275423.0183710268 266019.24741543614 299650.5670304525 211922.33209521734 127436.98912967174 228467.86073406617 1.1101935741150908 1.1248023943985381 0.6438452570054829 0.7284835747478223 1.2055219385610472 1.1643617905849757 1.3115655132747188 0.9275804982561305 0.5577895670761625 1.0 17.801631705712577 -7.5300108146605575 24.699924626762378 0.7668247364505327 1.0347315435759679 0.18506041279417418 0.21933171133417778 278.02449361280196 962826.4483978285 0.15840666100719455 0.06016898459377126 2.9511357375248725e-08 7.5300108146605575 0.26790680712543513 ELMWLNEKEEEEVGFDWSDR ddPTM_KYSE-520_SHP099_60min_R1 5 ELMWLNEKEEEEVGFDWSDR 20 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;;; 173.55 4.399e-09 124830000.0 304858.0 279970.0 195763.0 268283.0 245267.0 219073.0 192544.0 209259.0 244193.0 172941.0 False True 287946.919020644 266519.82095646264 208382.1962118747 293780.5356577746 264568.11752166494 217705.68414599658 212008.22656835258 208533.1293704178 199853.70680458486 171408.87728606208 1.679883350149322 1.5548775838002318 1.2157024741729585 1.7139166903677225 1.543491339017002 1.2700957359557892 1.2368567481749195 1.2165830187569546 1.1659472366244577 1.0 17.38708230316919 -6.921409897777825 0.5958882449154937 1.0260173180384076 1.565372658358697 0.6514531652360347 0.13605910580842004 0.5452426116493758 0.39371666393056953 0.13290587279956004 0.0897562437229274 1.1983677203956664e-07 6.921409897777825 0.5393553403202895 ELNFSHLPSNS(ph)VSPGDCLLTTTLGK ddPTM_KYSE-520_SHP099_60min_R1 1 ELNFSHLPSNSVSPGDCLLTTTLGK 25 0 H0YNU5;A0A3B3IT82;P54132 H0YNU5 BLM Bloom syndrome protein 1 ELNFSHLPS(0.115)NS(0.769)VS(0.115)PGDCLLTTTLGK 132.12 2.26e-05 139350000.0 79371.0 114800.0 91025.0 101640.0 85657.0 89825.0 78453.0 65630.0 90966.0 74790.0 True False 74968.1324078342 109284.83568168683 96892.61714514953 111299.83504081977 92397.71857833813 89264.368856108 86383.79486749503 65402.34484815717 74448.8674662496 74127.4187857396 1.0113414663004066 1.4742835710706104 1.307109012189015 1.5014664865442648 1.2464715498243317 1.2042017693091507 1.165342005461996 0.8822962666108517 1.004336434288089 1.0 16.177719655272284 -6.851540850363553 1.5181652300670867 0.9552000385489805 1.3258809223188666 0.5447878859456037 0.13352282645652974 0.2866898826076713 1.3267877327201067 0.07994824317187325 0.04400598699385506 1.4075348273853239e-07 6.851540850363553 0.37068088376988606 ELNFVTDSVEQELPSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 ELNFVTDSVEQELPSSPK 18 0 B4DP81;Q8TAP6-2;Q8TAP6 B4DP81 CEP76 Centrosomal protein of 76 kDa 1 ELNFVTDSVEQELPS(0.001)S(0.999)PK;ELNFVTDSVEQELPS(0.315)S(0.685)PK;ELNFVTDSVEQELPS(0.001)S(0.999)PK;ELNFVTDSVEQELPS(0.038)S(0.962)PK;ELNFVTDSVEQELPSS(1)PK;ELNFVTDSVEQELPSS(1)PK 332.29 5.6943e-59 793899000.0 930600.0 1015340.0 714509.0 754329.0 791101.0 1157380.0 902878.0 1156310.0 1178870.0 1192070.0 True False 878977.7628948921 966561.5423435883 760567.3933948203 826020.2013627167 853356.1479510355 1150156.3621116863 994149.7194801234 1152299.0304947821 964816.9248943288 1181509.187216427 0.7439449243435146 0.8180736576587746 0.6437253316554201 0.6991229609553664 0.7222594264895201 0.9734637483618673 0.8414236048576884 0.9752772496077984 0.816597056826436 1.0 20.17219941683318 -6.250743363503428 24.7916913002415 0.9148116138363118 0.7245722565469467 0.6769573185962774 0.0675959940348305 386.2302620915393 895221.7321618876 0.021748633950709403 0.021532513795345525 5.613796126150507e-07 6.250743363503428 -0.19023935728936514 ELNKS(ph)INPDEAVAYGAAVQAAILSGDK ddPTM_KYSE-520_SHP099_60min_R1 1 ELNKSINPDEAVAYGAAVQAAILSGDK 27 1 E9PKE3;P11142;E9PNE6;A8K7Q2;P11142-2 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 1 ELNKS(1)INPDEAVAYGAAVQAAILSGDK 113.37 0.00028414 55079000.0 26821.0 25919.0 22808.0 26824.0 22355.0 26755.0 23294.0 27957.0 30041.0 27417.0 True False 25333.18566366205 24673.81233478785 24278.240174090275 29373.34489507031 24114.21131744922 26588.012120736665 25648.784847532017 27860.02369221286 24586.311671982978 27174.10671010322 0.9322545883078938 0.9079898227386525 0.8934328709713841 1.0809313884143033 0.8873966520667137 0.9784318728258822 0.9438685555023564 1.0252415650467221 0.9047698212961639 1.0 14.729944990107047 ELNS(ph)NHDGADETSEKEQQEAIEHIDEVQNEIDR ddPTM_KYSE-520_SHP099_60min_R1 1 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDR 33 1 Q01105-2 Q01105-2 SET Protein SET 1 ELNS(0.969)NHDGADET(0.023)S(0.008)EKEQQEAIEHIDEVQNEIDR 64.38 0.01699 1302800000.0 161490.0 150210.0 157290.0 127930.0 167020.0 168680.0 161660.0 143890.0 162170.0 132630.0 True False 152531.8277776663 142993.68613019344 167429.16507289815 140088.428736443 180163.5237861938 167627.20555133082 178002.17044955888 143390.87917417864 132724.01597301936 131455.00138457867 1.160334914389649 1.0877766887838503 1.2736614302188103 1.0656759138939627 1.3705338092014905 1.2751679569872614 1.354092035865596 1.0907982021519358 1.0096536044659732 1.0 17.00420950673485 -7.485879480540531 6.18264466378927 1.0177172517564932 1.2247753235438246 0.47523407245068305 0.0956974740524562 0.17269271576554876 19.696557877421004 0.058490867166079256 0.02623662227698575 3.266784749331782e-08 7.485879480540531 0.20705807178733138 ELNS(ph)NHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILK ddPTM_KYSE-520_SHP099_60min_R1 1 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILK 44 2 Q01105-2 Q01105-2 SET Protein SET 1 ELNS(0.891)NHDGADET(0.055)S(0.055)EKEQQEAIEHIDEVQNEIDRLNEQASEEILK 105.18 3.8441999999999995e-05 899450000.0 119560.0 115540.0 138850.0 112990.0 116480.0 95867.0 93097.0 89749.0 166400.0 99591.0 True False 112927.76846304898 109989.28497092426 147800.4931678549 123728.53562831793 125646.31331945796 95268.65849294199 102508.15329916243 89437.68166657396 136185.954602642 98708.70122062555 1.1440507986286046 1.1142815538124171 1.4973400656696256 1.2534714173958192 1.272900076343054 0.9651495492783898 1.0384915618537485 0.9060769776179126 1.379675276025063 1.0 16.590889644115055 -6.248304383491601 24.398515082407297 1.0507967913655814 1.2617347279499376 0.2986609669274787 0.15181134493839918 708.5004863559201 1316054.1762332094 0.05016410095762269 0.04986382861901309 5.645411667826378e-07 6.248304383491601 0.21093793658435622 ELNSNHDGADET(ph)SEKEQQEAIEHIDEVQNEIDR ddPTM_KYSE-520_SHP099_60min_R1 7 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDR 33 1 Q01105-2 Q01105-2 SET Protein SET 1 ELNSNHDGADET(0.5)S(0.5)EKEQQEAIEHIDEVQNEIDR;ELNSNHDGADET(0.5)S(0.5)EKEQQEAIEHIDEVQNEIDR;ELNS(0.043)NHDGADET(0.478)S(0.478)EKEQQEAIEHIDEVQNEIDR;ELNSNHDGADET(0.748)S(0.252)EKEQQEAIEHIDEVQNEIDR;ELNSNHDGADET(0.613)S(0.387)EKEQQEAIEHIDEVQNEIDR;ELNS(0.002)NHDGADET(0.747)S(0.251)EKEQQEAIEHIDEVQNEIDR;ELNSNHDGADET(0.5)S(0.5)EKEQQEAIEHIDEVQNEIDR 275.25 1.1834e-41 4729980000.0 1271501.0 1436044.0 1505230.0 2601760.0 1309679.0 1246086.0 1198785.0 1257395.0 1570870.0 1101864.0 True False 1200968.3048555953 1367054.2906940116 1602259.534253155 2849030.4881523345 1412743.2862458318 1238308.7150618683 1319969.8868141454 1253033.390223198 1285639.6064101688 1092102.3421972196 1.099684762546472 1.2517639033202799 1.4671331361029236 2.60875778585029 1.2935997219853124 1.133876072979107 1.2086503579494896 1.1473589441280736 1.1772153183222447 1.0 20.058676628569142 -5.985212837191535 24.999321366007873 1.1547101663420976 1.6189544702559722 0.2574156215604011 0.3788231281873843 366.4901794691741 619588.4263513105 0.1256690976433605 0.142443026338888 1.0346349928983173e-06 5.985212837191535 0.4642443039138746 ELNSNHDGADET(ph)SEKEQQEAIEHIDEVQNEIDRLNEQASEEILK ddPTM_KYSE-520_SHP099_60min_R1 1 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILK 44 2 Q01105-2 Q01105-2 SET Protein SET 1 ELNS(0.113)NHDGADET(0.443)S(0.443)EKEQQEAIEHIDEVQNEIDRLNEQASEEILK 59.898999999999994 0.03787 196540000.0 18353.0 29106.0 29342.0 39029.0 17968.0 14048.0 21003.0 14604.0 32006.0 18029.0 True False 17334.92250420155 27707.70407100331 31233.43226885993 42738.30442550326 19381.979376064748 13960.321221158985 23126.188209526706 14553.34213259923 26194.51720560192 17869.277086349757 0.9700964633562934 1.5505777842668897 1.7478844901184603 2.3917198339350176 1.0846538045386591 0.7812471178155941 1.2941871177985524 0.8144337379891237 1.4658968619168016 1.0 14.12519364990902 -5.946374613446008 24.99999108063776 1.0578748609096815 1.6722309026368765 0.37602118110069127 0.3731811175816094 100.87746317483743 47028.15068620713 0.1177850864152226 0.13355571860370896 1.1314239992379252e-06 5.946374613446008 0.6143560417271949 ELNSNHDGADETS(ph)EKEQQEAIEHIDEVQNEIDR ddPTM_KYSE-520_SHP099_60min_R1 2 ELNSNHDGADETSEKEQQEAIEHIDEVQNEIDR 33 1 Q01105-2 Q01105-2 SET Protein SET 1 ELNSNHDGADET(0.357)S(0.642)EKEQQEAIEHIDEVQNEIDR;ELNSNHDGADET(0.119)S(0.881)EKEQQEAIEHIDEVQNEIDR 218.53 1.2152e-22 1384880000.0 207958.0 231728.0 266877.0 466300.0 252261.0 219251.0 206816.0 232545.0 255267.0 183214.0 True False 196422.15518600465 220595.43904918083 284080.3184382979 510617.01180179283 272112.5055312484 217882.57318197077 227722.97960965004 231738.35567141086 208916.94755740766 181590.8664983352 1.081674199664692 1.2147936914613666 1.5643976149037335 2.8119091100128326 1.498492246765853 1.199854251391924 1.2540442369205709 1.2761564507074776 1.1504815830554065 1.0 17.47033211545258 -6.146749635832689 4.894033683869198 1.2004219801007716 1.6840541568670977 0.21552358857837306 0.4397011678853364 0.407632934092758 14.806630851515767 0.16104741300510103 0.16140451862668972 7.132640975383159e-07 6.146749635832689 0.4836321767663261 ELNVS(ph)FINEK ddPTM_KYSE-520_SHP099_60min_R1 2 ELNVSFINEK 10 0 P49585;C9JEJ2;C9J050;Q9Y5K3-2;Q9Y5K3-4;Q9Y5K3-3;Q9Y5K3 P49585 PCYT1A;PCYT1B Choline-phosphate cytidylyltransferase A;Choline-phosphate cytidylyltransferase B 1 ELNVS(1)FINEK;ELNVS(1)FINEK 175.01 3.0403000000000004e-05 384670000.0 628540.0 536320.0 564330.0 508160.0 443320.0 481550.0 450860.0 539930.0 669310.0 646180.0 True False 593673.6332365744 510554.38216726825 600707.6147599244 556455.3736161245 478206.76185424207 478544.46782809665 496437.32876956684 538057.1088506092 547780.1759320567 640455.3479204323 0.9269555405606982 0.7971740478474348 0.9379383226487694 0.8688433556264977 0.7466668260433553 0.7471941164703165 0.7751318345322682 0.8401165055420152 0.8552979965124919 1.0 19.28873846486425 -1.3043544925826267 0.6771117784520827 0.8238503702595131 6.797754837789709 0.05758305304824263 0.0790317329219405 410.9463130282113 3.770125230752459 0.03227713907847046 3642.4277972861887 0.04961871436830621 1.3043544925826267 5.973904467530196 ELNYFAK ddPTM_KYSE-520_SHP099_60min_R1 2 ELNYFAK 7 0 P00558-2;P00558 P00558-2 PGK1 Phosphoglycerate kinase 1 0 ; 124.83 0.017397 1940540000.0 2667500.0 2973200.0 1960820.0 1718160.0 2752700.0 2936000.0 2208800.0 2145700.0 2357800.0 2299000.0 False True 2519528.457470583 2830363.009135814 2087217.594622925 1881453.409816359 2969321.8292794633 2917675.334946095 2432087.059810626 2138257.0675101453 1929682.955301139 2278632.6485949345 1.1057194581251133 1.242132210683934 0.9159956502466331 0.825694045495448 1.3031156343302752 1.280450070240682 1.0673449541374365 0.9383948170972848 0.8468600484992757 1.0 21.11973692755253 -7.234108291926855 4.083870600338107 0.9160558254559202 1.109146367725941 0.23782697550865362 0.14658528819806335 0.3414057179158535 13.189042885442676 0.08556579911757191 0.04404642812538228 5.8329963957056616e-08 7.234108291926855 0.19309054227002076 ELPDVQGESDSIS(ph)PLLLHLEDDDFS(ph)ENEK ddPTM_KYSE-520_SHP099_60min_R1 1 ELPDVQGESDSISPLLLHLEDDDFSENEK 29 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 2 ELPDVQGES(0.017)DS(0.135)IS(0.848)PLLLHLEDDDFS(1)ENEK 172.19 1.8762000000000002e-10 109830000.0 128630.0 129620.0 129860.0 122870.0 132980.0 117510.0 107920.0 122570.0 157250.0 137330.0 True False 121494.63748245224 123392.86063641342 138230.98338334632 134547.52785778747 143444.76944730023 116776.57650187885 118829.60679770123 122144.83327805296 128697.36394991259 136113.36304112332 0.8925988952733878 0.9065447938358064 1.0155577696040263 0.9884960951052045 1.0538625028606627 0.8579361635976747 0.8730194019363093 0.8973757649434456 0.945516010143911 1.0 17.05444918600152 -6.282137959329193 24.895011858772165 0.9057460804929971 0.9712099494154016 0.18586031683884907 0.05774998408058076 1235.787714347261 1486326.5143305007 0.02125419413894255 0.018766490050354818 5.222302693636583e-07 6.282137959329193 0.06546386892240452 ELPDVQGESDSISPLLLHLEDDDFS(ph)ENEK ddPTM_KYSE-520_SHP099_60min_R1 4 ELPDVQGESDSISPLLLHLEDDDFSENEK 29 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 ELPDVQGESDSISPLLLHLEDDDFS(1)ENEK;ELPDVQGESDSISPLLLHLEDDDFS(1)ENEK;ELPDVQGESDSISPLLLHLEDDDFS(1)ENEK;ELPDVQGESDSISPLLLHLEDDDFS(1)ENEK 289.18 2.2912999999999996e-52 317575000.0 314321.0 324127.0 302956.0 318540.0 300084.0 303485.0 268746.0 348690.0 389736.0 325083.0 True False 296884.9875466207 308555.4523954543 322485.028506739 348813.9458274572 323698.9035555997 301590.83754295507 295913.4683882046 347480.47577485774 318969.76684504387 322203.0175307467 0.9214221201956622 0.9576429629992833 1.0008752586433036 1.0825905620023286 1.0046426816120995 0.936027352736308 0.9184068810279425 1.078451960002823 0.9899651756508013 1.0 18.297610479829086 -4.571273913763204 3.089147539284943 1.0018154662110703 0.9254599901766918 0.2196913972645067 0.048870951141772215 0.42005888384425216 7.724180060096445 0.013849231037637603 0.05455660008376884 2.6836513067358454e-05 4.571273913763204 -0.07635547603437853 ELPPLS(ph)PSLSR ddPTM_KYSE-520_SHP099_60min_R1 6 ELPPLSPSLSR 11 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 ELPPLS(0.928)PS(0.072)LS(0.001)R;ELPPLS(0.923)PS(0.077)LSR;ELPPLS(0.671)PS(0.329)LSR;ELPPLS(0.571)PS(0.429)LSR;ELPPLS(0.937)PS(0.063)LSR;ELPPLS(0.885)PS(0.115)LSR 225.62 4.231e-10 15264810000.0 2446730.0 2822580.0 2266860.0 1818290.0 1918370.0 2556080.0 1870370.0 2535540.0 2835230.0 2392210.0 True False 2311005.0094646662 2686979.020021048 2412985.422704243 1991099.7349111764 2069334.8049677957 2540126.5565902633 2059445.2526521217 2526744.803539482 2320423.7023320226 2371016.8805112154 0.9746893952802184 1.1332601813622296 1.0177006509476976 0.8397661574142293 0.8727625779372883 1.0713236913111248 0.8685915606843273 1.065679803593254 0.9786618228680496 1.0 21.1770745034824 -5.007192143265371 24.84014803876859 0.954853124641028 1.0593512085429613 0.18971286235588913 0.08276963472347239 463.65179419707505 1601376.8020752582 0.02185483287593769 0.04277111037057946 9.835758497400259e-06 5.007192143265371 0.10449808390193327 ELPPS(ph)PEKK ddPTM_KYSE-520_SHP099_60min_R1 21 ELPPSPEKK 9 1 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-4;B5MEG9;P27816-3;P27816-6;P27816;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK;ELPPS(1)PEKK 150.46 0.00028627 68350800000.0 49253530.0 45854760.0 41217760.0 39765770.0 42495250.0 45315190.0 42212300.0 48496290.0 54031090.0 48174510.0 True False 46521338.50642218 43651828.500202015 43874722.760347806 43545096.82478534 45839384.41010216 45032361.09039376 46479531.23634744 48328067.68910914 44220406.06893786 47747721.32060162 0.9743153645815911 0.9142180462833447 0.9188862116738807 0.9119827212779894 0.9600329218291707 0.9431311033258404 0.9734397778746564 1.012154430671378 0.9261259981815753 1.0 25.5089285488173 -6.472186022989105 1.4778060477916164 0.979288824797651 0.9300663390777741 0.33899633949676244 0.027925613699124656 0.44139269331496417 1.9468288691161586 0.013597452645590296 0.01038986482662844 3.3714286805379087e-07 6.472186022989105 -0.04922248571987686 ELPRPVLEGQQSERT(ph)PNNRPDAPK ddPTM_KYSE-520_SHP099_60min_R1 2 ELPRPVLEGQQSERTPNNRPDAPK 24 3 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;Q5TAP6 Q9BVJ6-3;Q5TAP6 UTP14A;UTP14C U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C 1 ELPRPVLEGQQS(0.109)ERT(0.891)PNNRPDAPK;ELPRPVLEGQQS(0.328)ERT(0.672)PNNRPDAPK 122.47 0.00010481 2044400000.0 774310.0 718870.0 710490.0 523090.0 611070.0 676790.0 522060.0 611280.0 787150.0 594100.0 True False 731357.4807512823 684334.406154132 756289.3222241936 572804.3163272571 659157.7324873046 672565.9025674969 574834.9196146039 609159.6123538242 644223.4024367161 588836.7362028065 1.2420377938162286 1.1621802175033358 1.2843786328638866 0.9727727247811735 1.1194235888507442 1.1421941961444684 0.9762212244458537 1.0345136009721005 1.0940611596196903 1.0 19.16750815514615 -5.257436225459225 24.99962058834931 1.053746336710609 1.2227970177541738 0.6467710560830509 0.06117528843133213 228.0206842074618 1423979.5094278082 0.016838767868855284 0.02785845866392655 5.527945778267693e-06 5.257436225459225 0.1690506810435648 ELPSFVGEKVDEEGLK ddPTM_KYSE-520_SHP099_60min_R1 4 ELPSFVGEKVDEEGLK 16 1 P29034;R4GN49 P29034 S100A2 Protein S100-A2 0 ;;; 173.34 3.164e-08 1224040000.0 1507380.0 1505810.0 1117670.0 910670.0 1317510.0 1493150.0 1064840.0 1053220.0 1256480.0 1231870.0 False True 1423762.6265124693 1433468.6273331093 1189716.7965352284 997219.8029970794 1421190.5413935378 1483830.696994131 1172484.4190369204 1049566.625643396 1028334.9052832194 1220956.590180357 1.1661042153039645 1.1740537205514903 0.9744136737568091 0.8167528731302169 1.1639976005892254 1.2153017633288197 0.9602998406878034 0.859626488021459 0.8422370734174227 1.0 20.21958047706568 -6.990329192905774 24.236706685562005 0.8925516748874169 1.0765288269519533 0.3406244232961516 0.11726695597104672 173.6994118017777 435318.65957323264 0.05370036882963813 0.03614898884314347 1.0225176355342937e-07 6.990329192905774 0.18397715206453635 ELPSFVGEKVDEEGLKK ddPTM_KYSE-520_SHP099_60min_R1 2 ELPSFVGEKVDEEGLKK 17 2 P29034;R4GN49 P29034 S100A2 Protein S100-A2 0 ; 197.09 1.0873e-12 8230000000.0 6252000.0 5356000.0 4070100.0 2910500.0 5278200.0 4460000.0 3353900.0 3444300.0 4191300.0 3431300.0 False True 5905189.0969469845 5098689.720480094 4332465.158390248 3187113.0449262704 5693564.3111500945 4432163.485646999 3692944.9429096594 3432352.527205662 3430265.574074837 3400901.3515110007 1.7363600077148205 1.4992171761214936 1.2739167387096832 0.9371377512935665 1.674133920003436 1.3032320045619128 1.0858724088744607 1.0092478941445002 1.0086342470800542 1.0 21.697485728339657 -1.0000000000000002 0.24120637462749417 0.9876786807854043 5.113346780250804 0.5155896000524257 0.19505442589192704 46.10570356922968 0.6171584972501011 0.28605362115507166 76.2941955112014 0.09999999999999995 1.0000000000000002 4.1256680994654005 ELPSLSPAPDT(ph)GLSPSKR ddPTM_KYSE-520_SHP099_60min_R1 1 ELPSLSPAPDTGLSPSKR 18 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;A0A0A0MSL0 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 ELPSLSPAPDT(0.616)GLS(0.329)PS(0.055)KR 105.32 0.00067827 1332100000.0 830960.0 946050.0 669670.0 551720.0 623700.0 786500.0 572350.0 575280.0 781070.0 745580.0 True False 784864.9923223078 900600.337949999 712837.9997098836 604155.302919333 672781.6416324339 781591.1617626376 630208.7235977057 573284.4879513617 639247.3771723894 738974.7412524618 1.0620998912521262 1.2187159961971146 0.9646310758899824 0.8175588003121349 0.9104257616331519 1.05766965788025 0.8528149724435609 0.7757836038884393 0.8650463155059291 1.0 19.495165527180916 -4.9188399915457905 5.2548241328359 0.8928608843693924 1.137265384367177 0.5557060417881339 0.08565682065364202 0.14418482285504108 6.821762522775666 0.02346528606170235 0.050497480961844456 1.2054799972741286e-05 4.9188399915457905 0.24440449999778457 ELPSLSPAPDTGLS(ph)PSKR ddPTM_KYSE-520_SHP099_60min_R1 3 ELPSLSPAPDTGLSPSKR 18 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;A0A0A0MSL0 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 ELPSLSPAPDT(0.003)GLS(0.874)PS(0.123)KR;ELPSLSPAPDT(0.014)GLS(0.983)PS(0.004)KR;ELPSLSPAPDT(0.167)GLS(0.809)PS(0.024)KR 217.86 1.7365000000000004e-18 5588380000.0 3350120.0 3643560.0 2587660.0 2116920.0 2400390.0 2950800.0 2126110.0 2323150.0 2870750.0 2748300.0 True False 3164282.1653013523 3468517.9085049424 2754464.70400239 2318111.4403247945 2589287.0366491596 2932382.96265632 2341037.9476339966 2315091.534877288 2349494.1657183566 2723952.200145045 1.1616511351164167 1.2733402253975863 1.0112015562739025 0.8510103225017531 0.9505625820127407 1.0765177753486925 0.8594269559903955 0.8499016740286465 0.8625313489690645 1.0 21.377269956514557 -4.9074514623022445 4.400552390436696 0.9207083920703809 1.214956383686108 0.7099293182142672 0.07454600819213722 0.11127876210683858 3.857570434481912 0.020774681103168956 0.04601592327323173 1.2375094889642992e-05 4.9074514623022445 0.294247991615727 ELPSQASGGLANPPPVNLEDSLDEDLIRNPASS(ph)VEAVSK ddPTM_KYSE-520_SHP099_60min_R1 1 ELPSQASGGLANPPPVNLEDSLDEDLIRNPASSVEAVSK 39 1 K7EJT1;Q9NPG3-2;Q9NPG3 K7EJT1 UBN1 Ubinuclein-1 1 ELPSQASGGLANPPPVNLEDS(0.315)LDEDLIRNPAS(0.315)S(0.364)VEAVS(0.006)K 57.184 0.025172 59184000.0 22352.0 33147.0 24253.0 16103.0 20976.0 26654.0 22581.0 27713.0 32485.0 35513.0 True False 21112.09000239269 31554.56836533865 25816.38718617204 17633.42427845651 22626.691862885924 26487.64249920071 24863.70784932259 27616.87007126283 26586.542880209283 35198.3824486959 0.5998028469963084 0.8964777972775209 0.7334537950373494 0.5009725746391459 0.6428332863268904 0.752524424604122 0.7063877973814047 0.7846062276161795 0.7553342236382887 1.0 15.10322151048971 -8.484820272713996 0.6857348616096434 1.0042714475161223 0.688651896642977 0.4659527177388242 0.09853257081642816 1.5917875987141328 1.2924552621927654 0.1203801875886447 0.040082540980516175 3.2747618872523036e-09 8.484820272713996 -0.3156195508731453 ELPT(ph)SLFPVEYIPAFISLMER ddPTM_KYSE-520_SHP099_60min_R1 1 ELPTSLFPVEYIPAFISLMER 21 0 J3QKM0;E9PMX7;Q9P2N2-3;Q9P2N2-5;Q9P2N2-2;Q9P2N2 J3QKM0 ARHGAP28 Rho GTPase-activating protein 28 1 ELPT(0.5)S(0.5)LFPVEYIPAFISLMER 69.133 0.030330000000000003 677560000.0 55950.0 606950.0 328810.0 169420.0 469570.0 203700.0 328220.0 351230.0 651730.0 117330.0 True False 52846.341966440166 577791.2109494772 350005.6187146016 185521.62586201946 506522.4875121723 202428.63274132172 361399.6807185095 350011.6651076979 533392.2607763214 116290.54748135885 0.4544336845168893 4.968513980399791 3.009751233398457 1.595328510184873 4.355663452297074 1.7407144185452446 3.1077304952618023 3.0098032272468584 4.586720695091947 1.0 16.82737430851373 -4.227044356969978 23.563277265540968 3.0606770715578206 0.4544219175034269 0.27605682929120956 1.2565418823160879 10248.709558050989 7020903.971206713 0.29424882623954035 49.22707283321414 5.928647688307099e-05 4.227044356969978 -2.6062551540543937 ELPTVTTNVQNS(ph)QDK ddPTM_KYSE-520_SHP099_60min_R1 1 ELPTVTTNVQNSQDK 15 0 Q96B01-2;Q96B01;Q96B01-3;H0YGT5;F5H1Y0 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 ELPTVTTNVQNS(1)QDK 268.82 3.4849000000000004e-25 299670000.0 167460.0 169990.0 125780.0 120410.0 130540.0 152340.0 133850.0 136430.0 159220.0 162070.0 True False 158170.65997676612 161823.42523980796 133887.98005511548 131853.73019741333 140812.7553290012 151389.1895523462 147380.8642501144 135956.75617300154 130309.6616095713 160634.185888552 0.9846637507566723 1.0074034013661393 0.8334961783789098 0.8208323120515172 0.8766051544389007 0.9424468939468466 0.9174937665657747 0.8463749818941303 0.811219983397433 1.0 17.2934194318215 -4.75191881698413 24.999192566285092 0.876755746558498 0.996033637236462 0.3989709406087397 0.05624889965405422 190.75696015839276 500881.32660330663 0.014558937532374916 0.03744770966455319 1.7704398771333823e-05 4.75191881698413 0.11927789067796402 ELPTVTTNVQNS(ph)QDKSIEK ddPTM_KYSE-520_SHP099_60min_R1 1 ELPTVTTNVQNSQDKSIEK 19 1 Q96B01-2;Q96B01;Q96B01-3;H0YGT5;F5H1Y0 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 ELPTVTTNVQNS(0.998)QDKS(0.002)IEK 115.84 2.5626999999999997e-05 1617400000.0 469730.0 560830.0 500410.0 341840.0 347790.0 527700.0 360510.0 430710.0 567590.0 450730.0 True False 443673.1405164597 533886.8849770075 532667.2292843091 374328.37082205684 375159.0943455895 524406.428559624 396953.869038541 429215.96753847 464529.9637795281 446736.8828626342 0.9931419534323147 1.1950812781696623 1.1923511349030418 0.837916870493001 0.8397764069570814 1.173859711782231 0.8885630093824135 0.9607802355339627 1.0398289946486579 1.0 18.769065843755396 -5.247488288869952 24.9117319609878 0.9618814570444331 1.133680442777337 0.3283639200373222 0.10727566881041034 880.6286686475102 1572489.9216043877 0.029444887537759486 0.0506734310028404 5.656030088626863e-06 5.247488288869952 0.17179898573290397 ELPVS(ph)PGHRK ddPTM_KYSE-520_SHP099_60min_R1 2 ELPVSPGHRK 10 1 Q16236-3;Q16236-2;Q16236;C9JBM0 Q16236-3 NFE2L2 Nuclear factor erythroid 2-related factor 2 1 ELPVS(1)PGHRK;ELPVS(1)PGHRK 105.13 0.0008871 1988650000.0 2236600.0 1954030.0 2048340.0 2029510.0 1887720.0 1985390.0 2100500.0 2019050.0 2329900.0 2262920.0 True False 2112531.3394484385 1860155.4657411745 2180379.2738598795 2222394.0202055667 2036272.8243424373 1972998.4445669744 2312839.03890448 2012046.3867998119 1906848.8919993725 2242872.289325118 0.9418865931435181 0.8293630781362485 0.9721370602496308 0.9908696231983349 0.9078862109242757 0.8796748945347446 1.031195155387298 0.8970846875125636 0.8501816626274092 1.0 21.09691604404938 -4.777585715891739 24.998968978644076 0.9390642259079559 0.8856247869353758 0.1183326601878355 0.06039141024781588 468.9895808173632 726126.7898693957 0.01582039580905563 0.03309277017527114 1.6688383991830893e-05 4.777585715891739 -0.05343943897258008 ELQELVQYPVEHPDK ddPTM_KYSE-520_SHP099_60min_R1 4 ELQELVQYPVEHPDK 15 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ;;; 191.37 7.379999999999999e-11 2578240000.0 2186810.0 2240410.0 1428670.0 1424570.0 2213130.0 2208220.0 1645950.0 1858280.0 1917580.0 1883360.0 False True 2065503.2900023432 2132777.3406760283 1520764.3541528224 1559960.7044874125 2387290.740012808 2194437.679882384 1812338.6889239838 1851834.0604058104 1569395.8102580188 1866674.8956319091 1.106514741713032 1.1425542528411397 0.8146915982592734 0.8356895505145434 1.278900115707968 1.1755864317977662 0.9708914461564389 0.9920495876058403 0.8407440491809609 1.0 20.83203925569889 -7.164228648073351 2.8085154252674824 0.9322304424754336 1.051267108214615 0.11473013137101551 0.14126126674383743 0.7077815688615118 10.736574762793868 0.08853829594308654 0.044169540880761374 6.851274244695511e-08 7.164228648073351 0.11903666573918137 ELQGDGPPSS(ph)PTNDPTVK ddPTM_KYSE-520_SHP099_60min_R1 1 ELQGDGPPSSPTNDPTVK 18 0 Q12873-3;Q12873-2;Q12873;A0A5F9ZHX5 Q12873-3 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 ELQGDGPPS(0.392)S(0.602)PT(0.006)NDPTVK 250.79 2.5382e-22 0.0 316690.0 414250.0 288990.0 221450.0 262030.0 374730.0 274460.0 354170.0 407530.0 324800.0 True False 299122.5743941368 394348.80819807336 307618.7578003486 242496.54141862952 282650.2702532414 372391.1710709641 302205.0952714704 352941.4669338991 333532.8249952803 321922.5246905764 0.9291756601425938 1.224980478073447 0.9555676729859888 0.7532760922886986 0.8780071246176934 1.1567726471730948 0.9387510102374541 1.0963553024850847 1.036065510842596 1.0 18.296353999132165 -6.2466821497539975 24.91647629882636 1.0449337429943368 0.9531580820701719 0.13698401872879162 0.12189891026961745 1936.4671027320417 3269582.3418081254 0.043674443773177474 0.043489651549133736 5.666538583737282e-07 6.2466821497539975 -0.09177566092416489 ELQQAELPNRS(ph)PGFGIK ddPTM_KYSE-520_SHP099_60min_R1 4 ELQQAELPNRSPGFGIK 17 1 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 ELQQAELPNRS(1)PGFGIK;ELQQAELPNRS(1)PGFGIK;ELQQAELPNRS(1)PGFGIK;ELQQAELPNRS(1)PGFGIK 169.84 1.8357e-08 2756030000.0 1827580.0 1672620.0 1504980.0 1363750.0 1388940.0 1569060.0 1357100.0 1531810.0 1981910.0 1437130.0 True False 1726200.494209595 1592264.8245461956 1601993.4188531386 1493360.389973612 1498241.6760124308 1559266.9145267443 1494288.9120196495 1526496.5086371405 1622045.1038853473 1424398.1462702216 1.2118806098769794 1.1178509524991533 1.1246809208843394 1.0484150052314851 1.0518419164863195 1.0946847400845583 1.0490668749692187 1.0716782471489892 1.1387582244000127 1.0 20.44192103259742 -3.9842927246171196 0.9887118588893905 1.0686840260478994 1.3542760053603138 0.5991544319734962 0.036105454698904006 2.1454949824488607 1.1719581117005051 0.011420489164010797 0.7394587783570642 0.00010368293330756251 3.9842927246171196 0.2855919793124144 ELRAPS(ph)PPVEHPR ddPTM_KYSE-520_SHP099_60min_R1 3 ELRAPSPPVEHPR 13 1 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 ELRAPS(1)PPVEHPR;ELRAPS(1)PPVEHPR;ELRAPS(1)PPVEHPR 80.859 0.0058232 1012170000.0 878170.0 1078000.0 1107030.0 704750.0 799200.0 727560.0 648000.0 665930.0 1180580.0 720040.0 True False 829456.1595115053 1026211.2618890116 1178390.9251106253 771729.2281091858 862092.4931740284 723019.0281653209 713506.1638705574 663620.0442592311 966216.431999923 713661.0057826439 1.1622551222367452 1.437953389037427 1.6511914137978303 1.0813666738914238 1.2079859852068076 1.0131126995966584 0.9997830315642415 0.9298813286449147 1.3538871034999473 1.0 19.44487942066222 -5.293099745350157 23.175112252676925 1.0795337603086854 1.4192152578372768 0.48128545276325474 0.15857461374636572 219.06014435102364 160349.50450622672 0.044788583883392595 0.06644321580219274 5.092139053701299e-06 5.293099745350157 0.33968149752859134 ELS(ph)APAR ddPTM_KYSE-520_SHP099_60min_R1 3 ELSAPAR 7 0 F5H672;F5H5N2;B4DNC9;B3KQ30;Q9H1K1 F5H672 ISCU Iron-sulfur cluster assembly enzyme ISCU, mitochondrial 1 ELS(1)APAR;ELS(1)APAR;ELS(1)APAR 86.67 0.0082581 764990000.0 2236490.0 2017530.0 1819780.0 1623820.0 1841270.0 2052720.0 1671240.0 1963370.0 2401750.0 1934680.0 True False 2112427.4413677184 1920604.8304257288 1937085.93055095 1778147.3645807137 1986167.4736067846 2039908.213062178 1840185.2489306007 1956559.5277240025 1965652.743190474 1917540.2403582614 1.101633956309071 1.0015981881386202 1.0101931056158888 0.927306414309457 1.035789201083833 1.0638150741916395 0.9596592604423216 1.0203486146180958 1.0250907395941915 1.0 20.87082542290957 -4.260315239154206 24.247323494990702 1.0046410434585287 1.1016340045587734 0.38961134198770386 0.03633499837664652 66.16971855565704 1426965.3875318891 0.009169394887573176 0.05387536338988686 5.491421261197663e-05 4.260315239154206 0.09699296110024469 ELS(ph)EES(ph)EDEELQLEEFPMLK ddPTM_KYSE-520_SHP099_60min_R1 2 ELSEESEDEELQLEEFPMLK 20 0 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed 2 ELS(1)EES(1)EDEELQLEEFPMLK;ELS(1)EES(1)EDEELQLEEFPMLK 106.94 0.00020671 32364000.0 43169.0 46094.0 37007.0 50510.0 47091.0 48824.0 40887.0 51321.0 46184.0 48665.0 True False 40774.32951473201 43879.57505149548 39392.53043329357 55310.45521361478 50796.79378886159 48519.27130565676 45020.25697866582 51142.97942941144 37798.149803896704 48233.86596079706 0.8453464946780769 0.9097254424341475 0.8166985923398833 1.1467141211233067 1.0531354428473056 1.0059171152710766 0.9333744264923082 1.0603126747289717 0.7836433810762302 1.0 15.557758826782761 -5.228954808911905 24.995218910149642 1.0000846747487966 0.8625036890024347 0.329493213523133 0.09159448769250962 790.2785322608335 608078.0174256013 0.02464011104846319 0.04267512804602845 5.902624975230966e-06 5.228954808911905 -0.1375809857463619 ELS(ph)GTIK ddPTM_KYSE-520_SHP099_60min_R1 6 ELSGTIK 7 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 1 ELS(0.915)GT(0.085)IK;ELS(0.978)GT(0.022)IK;ELS(0.855)GT(0.145)IK;ELS(0.978)GT(0.022)IK;ELS(0.952)GT(0.048)IK;ELS(0.984)GT(0.016)IK 140.84 0.0016476 10948540000.0 16614350.0 14920720.0 13719210.0 13206650.0 14693690.0 13605470.0 13496310.0 13866960.0 16919780.0 14623720.0 True False 15692718.885614391 14203906.214742683 14603572.228112102 14461806.0452759 15849999.807340194 13520553.215037167 14860648.726092339 13818858.752332807 13847574.464944046 14494165.217881985 1.0826921488554377 0.9799740793087415 1.007548348496479 0.9977674345421313 1.0935434755349323 0.9328273144255568 1.025284899316465 0.953408391901313 0.9553895831033983 1.0 23.78896890891111 -6.280868480715825 24.965968276825848 0.9737139961344475 1.026103694407076 0.335680737386048 0.04098280392708968 1075.8474390991614 1382435.521849874 0.0140787324634579 0.012430713660226024 5.237590247918191e-07 6.280868480715825 0.052389698272628515 ELS(ph)HEDLEPPPEHIPPPPRPPK ddPTM_KYSE-520_SHP099_60min_R1 1 ELSHEDLEPPPEHIPPPPRPPK 22 1 B4DSN5;P18031 B4DSN5 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 1 ELS(1)HEDLEPPPEHIPPPPRPPK 71.42699999999999 0.009732 805840000.0 91137.0 497800.0 217190.0 241420.0 293130.0 195020.0 278250.0 331700.0 520140.0 179790.0 True False 86081.44893289467 473884.940786966 231190.41491628689 264364.4842144303 316197.6633184472 193802.80784100402 306378.225458306 330549.41011936194 425695.68766236893 178197.20047450322 0.4830684696711122 2.659328763443567 1.2973852243507384 1.4835501540455238 1.774425537979702 1.0875749300491042 1.7193212050609246 1.8549641029105706 2.38890221916409 1.0 17.44311514635121 -6.98945885113066 24.887928505539428 1.8305885452324144 1.5157327145045876 0.038657958501385536 0.6062462727713054 647.4870699536052 1528729.4444763078 0.24006891773043365 0.16167251954673525 1.0245688523533337e-07 6.98945885113066 -0.31485583072782686 ELS(ph)NS(ph)PLRENSFGS(ph)PLEFR ddPTM_KYSE-520_SHP099_60min_R1 2 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 ELS(1)NS(1)PLRENS(0.287)FGS(0.713)PLEFR;ELS(1)NS(1)PLRENS(0.01)FGS(0.99)PLEFR 158.73 9.5463e-08 983520000.0 647830.0 608600.0 542160.0 631380.0 583970.0 555480.0 548650.0 560140.0 714090.0 574480.0 True False 611893.5784829116 579361.9424727759 577108.5010866706 691386.1653686811 629925.1166652122 552013.0432751556 604112.8963079954 558197.005077659 584429.2567439936 569390.5541386765 1.0746465216805887 1.0175123880465198 1.0135547505870888 1.214256471842159 1.1063146588690904 0.969480507294667 1.0609815914874876 0.980341175350283 1.0264119285014595 1.0 19.119059034235775 -6.252709183875302 24.933700648676908 1.009560523071436 1.0846765557480125 0.31802845920742684 0.05692871046961172 886.0514974429927 2530587.3944298746 0.0203298158693163 0.019996900925306704 5.588442877419937e-07 6.252709183875302 0.07511603267657652 ELS(ph)NS(ph)PLRENSFGSPLEFR ddPTM_KYSE-520_SHP099_60min_R1 6 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ELS(1)NS(1)PLRENSFGSPLEFR;ELS(1)NS(1)PLRENSFGSPLEFR;ELS(0.995)NS(0.954)PLRENS(0.05)FGS(0.001)PLEFR;ELS(1)NS(1)PLRENSFGSPLEFR;ELS(1)NS(1)PLRENSFGSPLEFR;ELS(1)NS(1)PLRENSFGSPLEFR 194.77 4.0701e-13 4277340000.0 3811870.0 3913650.0 3673980.0 3637570.0 3584450.0 3535040.0 3211300.0 3257830.0 4729560.0 3394610.0 True False 3600417.972325546 3725632.379491588 3910810.6293758447 3983283.559124702 3866525.8222693303 3512976.5041034915 3535929.5432677795 3246529.3481132397 3870791.1265052394 3364536.3963666176 1.0701081956532432 1.107324142343926 1.1623624085621875 1.1839026510238597 1.149200177012445 1.044119037587816 1.0509410886701211 0.964926208442621 1.1504679012197132 1.0 21.681976297119423 -6.26761339199415 22.71448056640063 1.0404518532593097 1.137348997964485 0.43310571193513725 0.05284284300605846 136.15118933699512 500902.367466771 0.018324538168905374 0.016609251139610218 5.399911075327775e-07 6.26761339199415 0.09689714470517541 ELS(ph)NSPLRENS(ph)FGS(ph)PLEFR ddPTM_KYSE-520_SHP099_60min_R1 1 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 ELS(0.5)NS(0.5)PLRENS(1)FGS(1)PLEFR 126.36 0.00012458 118180000.0 120710.0 123320.0 126890.0 104030.0 109580.0 100950.0 91460.0 105320.0 139160.0 117860.0 True False 114013.97567058077 117395.52209290626 135069.53243117835 113916.97992223989 118203.32257508778 100319.93360449871 100705.6693635821 104954.6695018727 113892.05193812301 116815.85209369256 0.9760145872936445 1.0049622545983636 1.156260302093635 0.9751842569352006 1.0118774160914599 0.8587869865815537 0.8620890706067081 0.8984625598389973 0.9749708613756932 1.0 16.833876537911234 -6.12917776571166 5.023529248338323 0.9093215243950471 1.0309931973832342 0.4085867945606213 0.0633007997449155 0.2182540209099017 8.007419024176711 0.021617764689852343 0.02171462620809156 7.427150670351146e-07 6.12917776571166 0.12167167298818715 ELS(ph)NSPLRENS(ph)FGSPLEFR ddPTM_KYSE-520_SHP099_60min_R1 1 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ELS(0.589)NS(0.495)PLRENS(0.76)FGS(0.156)PLEFR 107.06 0.00059331 352260000.0 341840.0 356720.0 369730.0 334200.0 321110.0 288400.0 292140.0 335680.0 440680.0 310880.0 True False 322877.4537588549 339582.63575236354 393563.38738891657 365962.26751910575 346379.530134024 286599.98862345156 321672.3622116426 334515.60442830133 360663.6206387751 308125.8450609804 1.047875272179635 1.1020907242790932 1.2772813241648957 1.1877038988620998 1.1241495502120988 0.9301393999154186 1.0439642352882836 1.0856460429734422 1.1705075261291278 1.0 18.233160172644972 -6.014128499562777 24.22543282058452 1.0485928185908093 1.1585049651407893 0.2957427133661822 0.07939265222903276 599.1791417152044 1027383.6753721987 0.027429028882234217 0.028532361561619344 9.679914034488783e-07 6.014128499562777 0.10991214654997994 ELS(ph)PAALEK ddPTM_KYSE-520_SHP099_60min_R1 8 ELSPAALEK 9 0 O75683 O75683 SURF6 Surfeit locus protein 6 1 ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK;ELS(1)PAALEK 160.72 5.9866000000000006e-05 37185700000.0 19598880.0 19016980.0 15657580.0 13104800.0 14014990.0 17325850.0 14480400.0 17213410.0 20253660.0 16559360.0 True False 18511691.057001356 18103375.73573109 16666892.659813764 14350276.2518982 15117889.978614962 17217712.943452246 15944220.147085182 17153700.698350098 16576105.897219637 16412656.953387145 1.1278911823707511 1.1030131067227982 1.0154902224026654 0.8743420576359927 0.9211116775029544 1.0490509240735064 0.9714588072100484 1.0451507484173683 1.0099587132233798 1.0 23.968305471813512 -4.7959905418829845 3.729084712524373 0.9810509668915394 1.120241580736406 0.5237573205756195 0.050334792721607846 0.17761345600338077 5.139170916905619 0.014619517482419978 0.0372043926058849 1.5995928643594868e-05 4.7959905418829845 0.13919061384486653 ELS(ph)PAALEKR ddPTM_KYSE-520_SHP099_60min_R1 4 ELSPAALEKR 10 1 O75683 O75683 SURF6 Surfeit locus protein 6 1 ELS(1)PAALEKR;ELS(1)PAALEKR;ELS(1)PAALEKR;ELS(1)PAALEKR 126.32 0.00027505 2638980000.0 1423030.0 1603220.0 1587610.0 1129890.0 1264140.0 1229250.0 951870.0 1069430.0 1906660.0 1108850.0 True False 1344091.689160024 1526198.9047177199 1689949.8808658123 1237274.4058861858 1363620.6260272965 1221577.7947828644 1048094.3089559665 1065720.3969368385 1560458.6069872193 1099026.451672246 1.222983930109138 1.3886825948506525 1.537678986974731 1.1257912891938004 1.240753235695512 1.1115090022848384 0.9536570365173808 0.9696949471191253 1.4198553680058126 1.0 20.06779467921198 -5.3319099765190625 9.147673973378778 1.1137153884174638 1.3834190981264312 0.40388875192268425 0.1479359369003172 0.42310713163124203 52.48928127184631 0.042398130807850355 0.06296476822584988 4.6568261334288925e-06 5.3319099765190625 0.2697037097089674 ELS(ph)PAGSISK ddPTM_KYSE-520_SHP099_60min_R1 3 ELSPAGSISK 10 0 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;O95453-4 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 1 ELS(1)PAGSISK;ELS(1)PAGSISK;ELS(1)PAGSISK 205.97 3.3062e-07 10547200000.0 11881300.0 10936400.0 9003800.0 8587800.0 8479100.0 10381100.0 9100200.0 10378000.0 11856100.0 9707800.0 True False 11222220.604215652 10410998.928128934 9584199.354589352 9403981.92998379 9146356.930520412 10316307.704226486 10020137.025393272 10342001.140243411 9703331.107959028 9621796.444554113 1.1663331966004509 1.0820223633000992 0.9960925082772832 0.9773623859301653 0.9505872404624817 1.0721810385071557 1.0413998137597908 1.0748513751916806 1.0084739543051822 1.0 23.197874847902625 -4.446949736863736 2.874327658293635 1.0173573039414257 1.1684217196919349 0.6130957404448971 0.037488441597769616 0.2255815031077132 3.1756348457291024 0.010825763215611134 0.0635006595359171 3.5731418956969175e-05 4.446949736863736 0.15106441575050922 ELS(ph)PLFLR ddPTM_KYSE-520_SHP099_60min_R1 2 ELSPLFLR 8 0 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 ELS(1)PLFLR;ELS(1)PLFLR 98.044 0.0066053 0.0 81924.0 86694.0 76098.0 68248.0 73271.0 79859.0 73251.0 73249.0 91856.0 81754.0 True False 77379.51240855492 82529.09010965303 81003.39884110501 74734.26940049062 79037.01084503783 79360.570358808 80655.92594086751 72994.91631544521 75177.2659013237 81029.72316364954 0.9549522000991837 1.0185039129774063 0.9996751275764405 0.922306858306248 0.9754076375827277 0.9794007342037875 0.995386912256542 0.9008412402942925 0.9277739447473358 1.0 16.306163591188543 -7.245935646665196 24.83028308561956 0.9357306898204498 0.9781613239501586 0.17489561057933967 0.033861072140898736 1033.40086835224 1655064.375959269 0.01598257746966449 0.009183448601056786 5.67628709848423e-08 7.245935646665196 0.04243063412970882 ELS(ph)PLISLPS(ph)PVPPLS(ph)PIHSNQQTLPR ddPTM_KYSE-520_SHP099_60min_R1 6 ELSPLISLPSPVPPLSPIHSNQQTLPR 27 0 E7ETI4;E7EMC5;A0A669KBI3;F5GXF9;P51825;P51825-3;P51825-2 E7ETI4 AFF1 AF4/FMR2 family member 1 3 ELS(1)PLIS(0.025)LPS(0.975)PVPPLS(0.97)PIHS(0.016)NQQT(0.013)LPR;ELS(0.999)PLIS(0.264)LPS(0.737)PVPPLS(0.942)PIHS(0.034)NQQT(0.023)LPR;ELS(1)PLIS(0.01)LPS(0.99)PVPPLS(0.991)PIHS(0.009)NQQTLPR;ELS(1)PLIS(0.018)LPS(0.982)PVPPLS(0.998)PIHS(0.002)NQQTLPR;ELS(1)PLIS(0.004)LPS(0.996)PVPPLS(0.98)PIHS(0.02)NQQT(0.001)LPR;ELS(1)PLIS(0.008)LPS(0.992)PVPPLS(0.99)PIHS(0.006)NQQT(0.005)LPR 153.69 2.9583e-07 864367000.0 197412.0 192914.0 177691.0 201020.0 194049.0 200580.0 177711.0 190802.0 221485.0 189982.0 True False 186461.16282893438 183646.12187018248 189145.24617565228 220124.88036113337 209319.55231222123 199328.10581862665 195675.76217222313 190140.1523955217 181268.90718248885 188298.90728375962 0.9902402808314983 0.975290427965333 1.0044946564167643 1.1690183630721402 1.1116344504154996 1.0585728228270939 1.0391763021616842 1.0097783101257587 0.9626657413859719 1.0 17.522665102318452 -9.739105683907827 9.447174529995987 0.9999999994166654 1.0391346881937942 0.027294034521674893 0.060728748157661334 0.0 0.0 0.06558108346604288 0.015905749068996635 1.8234519182469594e-10 9.739105683907827 0.03913468877712878 ELS(ph)PPRPR ddPTM_KYSE-520_SHP099_60min_R1 1 ELSPPRPR 8 1 Q99956 Q99956 DUSP9 Dual specificity protein phosphatase 9 1 ELS(1)PPRPR 76.22800000000001 0.017294999999999998 0.0 219120.0 206110.0 184560.0 186170.0 183090.0 194770.0 174260.0 187630.0 220330.0 185510.0 True False 206964.97679510925 196208.16622258266 196457.0329064408 203863.54082594856 197498.14136040158 193554.36818373698 191875.9014137089 186979.155323171 180323.62606730804 183866.5257245962 1.1256261898650926 1.0671228242843525 1.0684763424567192 1.1087583235857994 1.0741386480333208 1.052689538897644 1.0435608148767086 1.0169287453836868 0.9807311328512571 1.0 17.488299324676483 -6.935995517202748 0.9471302117069134 0.9895124114675549 1.0898685258539227 0.8223219845504267 0.018220647159716358 0.23647819100776837 0.3993382540771426 0.014869278121226862 0.007433162526872729 1.1587893171423669e-07 6.935995517202748 0.10035611438636782 ELS(ph)PQHK ddPTM_KYSE-520_SHP099_60min_R1 7 ELSPQHK 7 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 ELS(1)PQHK;ELS(1)PQHK;ELS(1)PQHK;ELS(1)PQHK;ELS(1)PQHK;ELS(1)PQHK;ELS(1)PQHK 102.62 0.0030529 16743780000.0 7549800.0 6224710.0 5427600.0 6017300.0 6528200.0 6307930.0 6852860.0 6370830.0 7156880.0 6325560.0 True False 7130997.543846822 5925665.588119805 5777471.780467047 6589182.382832788 7041932.199622995 6268559.869062176 7545613.966268488 6348731.077692901 5857371.002262959 6269520.459611209 1.1374071732894602 0.9451545180039611 0.9215173341702956 1.0509866624219297 1.12320108770483 0.9998467840474847 1.2035392523045396 1.0126342387096388 0.9342614064339766 1.0 22.57992366833261 -4.223742661776175 22.50863307209393 1.0276609221510489 1.1374081636803774 0.14546892756472085 0.08316669729976006 11380.865134965396 6795013.762212765 0.02175031487506186 4.132307973545414 5.9738916059046574e-05 4.223742661776175 0.10974724152932858 ELS(ph)PQHKR ddPTM_KYSE-520_SHP099_60min_R1 7 ELSPQHKR 8 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 ELS(1)PQHKR;ELS(1)PQHKR;ELS(1)PQHKR;ELS(1)PQHKR;ELS(1)PQHKR;ELS(1)PQHKR;ELS(1)PQHKR 88.24 0.0030775 145227600000.0 31774700.0 31598630.0 28959820.0 24181200.0 25702810.0 24780040.0 21662810.0 22750270.0 35158300.0 22270370.0 True False 30012094.04970594 30080584.384289417 30826616.334550284 26479373.977657102 27725474.918015927 24625378.578670904 23852698.24345178 22671354.62332293 28774438.988618203 22073071.847885687 1.3596700204000247 1.3627729113367946 1.3965711953002624 1.1996234217030142 1.256076866377421 1.1156298837050944 1.0806243194345675 1.0271046449520143 1.3035992084343448 1.0 24.395784083648742 -5.709659169677182 1.0978843449019682 1.1025295153957357 1.3798999643338483 0.6352723518637444 0.08427653066911185 0.3189662620536132 0.8133551790829987 0.03495410442152335 0.05575826301895958 1.9513754205099247e-06 5.709659169677182 0.2773704489381126 ELS(ph)PSSLK ddPTM_KYSE-520_SHP099_60min_R1 3 ELSPSSLK 8 0 O15021;O15021-2;O15021-3;O15021-6;H7C1I9 O15021 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 ELS(0.924)PS(0.075)SLK;ELS(0.854)PS(0.126)S(0.02)LK;ELS(0.971)PS(0.025)S(0.004)LK 92.445 0.004007800000000001 1621640000.0 3536540.0 3213280.0 2961990.0 2527970.0 2725080.0 3031410.0 2838690.0 3153440.0 3950400.0 3536500.0 True False 3340361.076282291 3058909.2055683853 3152924.614751563 2768227.5087381033 2939528.29241577 3012489.845745552 3125652.488144615 3142501.4526584325 3233106.94148003 3505169.361355364 0.9529813632145452 0.8726851373554114 0.8995070679073845 0.7897557074582259 0.8386266081246144 0.8594420226761013 0.8917265232901618 0.896533413564731 0.9223825179819174 1.0 21.741052722799594 -8.06940860423083 1.0386836761230864 0.9992559031784447 0.8670643358444918 0.4947704143954996 0.0396501207358778 0.5360371786028558 1.2789871769823158 0.03986948276406943 0.013075149757015958 8.522978556384432e-09 8.06940860423083 -0.13219156733395288 ELSDFISYLQR ddPTM_KYSE-520_SHP099_60min_R1 3 ELSDFISYLQR 11 0 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ;; 194.94 4.5068e-06 254609300.0 355683.0 554307.0 430094.0 302187.0 563086.0 493016.0 398115.0 410206.0 437971.0 351115.0 False True 335952.55495351786 527677.2596882298 457818.5474147308 330906.76162416587 607397.6646789172 489938.90426900063 438360.34942797356 408783.0911288004 358446.50675044296 348004.39426333614 0.9653687151412846 1.5162948180732871 1.3155539267940908 0.9508694921069518 1.7453735489882845 1.4078526373384301 1.2596402707957324 1.174649222444797 1.0300056914775773 1.0 18.408745997585235 -7.514790971995645 1.913239229152067 1.0040722962920763 1.326468687339075 0.2197048192673574 0.22187195463040735 0.5363936894528192 3.5384198796054873 0.19171983236975257 0.06281867939216511 3.056391815209189e-08 7.514790971995645 0.3223963910469987 ELSDIAHR ddPTM_KYSE-520_SHP099_60min_R1 8 ELSDIAHR 8 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;;;;;;; 214.64 1.5075e-08 19861930000.0 16606490.0 19873200.0 14199000.0 17297980.0 18420500.0 17287980.0 13096630.0 14301130.0 14957850.0 14611630.0 False True 15685294.895482905 18918461.64171865 15114290.259203276 18941974.818372656 19870088.55169193 17180079.304169413 14420565.171191437 14251522.717938846 12241881.496713495 14482182.325876135 1.0830753640946158 1.3063267134757697 1.0436472845807028 1.3079503069456566 1.3720369005566875 1.1862907756293601 0.9957453128749385 0.9840728694925241 0.8453064062617297 1.0 23.787775683310006 -6.788954744650803 3.259775492723321 0.9445069686977259 1.227255959629672 0.616505821622714 0.1014457292816445 0.16504301780655337 3.6196173574976216 0.0454703599682138 0.03078055271789633 1.6257181537342488e-07 6.788954744650803 0.28274899093194605 ELSDQATAS(ph)PIVAR ddPTM_KYSE-520_SHP099_60min_R1 4 ELSDQATASPIVAR 14 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 ELSDQAT(0.01)AS(0.99)PIVAR;ELSDQAT(0.003)AS(0.997)PIVAR;ELSDQAT(0.005)AS(0.994)PIVAR;ELSDQATAS(1)PIVAR 329.72 7.824099999999999e-44 2506380000.0 2537160.0 2695080.0 2324030.0 1809080.0 2008050.0 2598310.0 2063710.0 2569900.0 3018120.0 2556360.0 True False 2396418.677096931 2565604.3114024494 2473840.692379475 1981014.419280265 2166072.110758394 2582092.9834958455 2272329.9466686854 2560985.6167191663 2470105.488613735 2533712.639217986 0.9458131281361766 1.0125869333762754 0.9763698748185627 0.7818623109097693 0.8549004639401169 1.0190946453552017 0.8968380673863732 1.0107640373572901 0.9748956730058059 1.0 21.27282147995771 -7.269130969978894 24.178648402136798 0.9946223960524644 0.9272004036472625 0.1747185070840892 0.06815453994388805 782.2375471956078 2458951.6642598026 0.03957908605668934 0.019598879506334075 5.381074812295798e-08 7.269130969978894 -0.06742199240520186 ELSESVQQQSTPVPLIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 ELSESVQQQSTPVPLISPK 19 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ELSESVQQQSTPVPLIS(1)PK;ELSESVQQQSTPVPLIS(1)PK 150.03 9.382e-07 537690000.0 565600.0 733290.0 496740.0 480280.0 491450.0 714280.0 525210.0 643120.0 741530.0 712730.0 True False 534225.0405043536 698061.6477092695 528760.6552121015 525925.6667985527 530124.3190320018 709821.9135712878 578303.3523556404 640889.1668253369 606886.844450102 706415.7666955494 0.7562473343472154 0.9881739346994498 0.7485119672307462 0.7444987662983686 0.7504423655658219 1.0048217311055663 0.8186444578676529 0.9072407455219595 0.8591071619040712 1.0 19.4301580177058 -6.244462024689295 24.956633305310998 0.9059579772507383 0.8024893224102825 0.3234121277075489 0.08604690096579276 1169.3583132654287 1718952.1452047066 0.028669373202180284 0.028598978806318204 5.695580248927291e-07 6.244462024689295 -0.10346865484045586 ELSESVQQQSTPVPLIS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 2 ELSESVQQQSTPVPLISPKR 20 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 ELSESVQQQSTPVPLIS(1)PKR;ELSESVQQQSTPVPLIS(1)PKR 143.48 1.2652e-06 1211260000.0 407950.0 515310.0 509020.0 249400.0 323890.0 447250.0 300850.0 342610.0 651950.0 388730.0 True False 385320.2002718372 490553.7341039205 541832.2436607967 273102.901015156 349378.300317988 444458.54685103614 331262.8540130506 341421.5658757754 533572.3143220692 385286.15462736384 1.0000883645676453 1.273219211778757 1.4063112238871887 0.70883133934385 0.9068021160944525 1.1535803752950893 0.8597839554692465 0.8861506227909673 1.38487279626781 1.0 18.55557081769009 -5.24756123567419 24.986848262696775 0.9794325172058409 1.2312075414339407 0.24099736769435842 0.19557408057686856 1127.1668395610925 2029400.3071665259 0.053093003702412336 0.09137202630694591 5.6550801463912725e-06 5.24756123567419 0.25177502422809983 ELSFGR ddPTM_KYSE-520_SHP099_60min_R1 4 ELSFGR 6 0 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 ;;; 156.22 0.051148 1537220000.0 1341600.0 1313710.0 951090.0 812830.0 1361720.0 1341380.0 1004590.0 1126640.0 1169190.0 1157350.0 False True 1267178.7735867056 1250597.3996810897 1012398.7831978039 890081.1188137502 1468879.616873044 1333007.949860354 1106143.761053585 1122731.948799753 956894.5688813888 1147096.7794046754 1.1046834027764867 1.0902283243530067 0.8825748632327453 0.7759424791303903 1.2805193452250547 1.1620710421244174 0.9642985499686048 0.9787595684667799 0.834188174931501 1.0 20.12955568454634 -6.9803619220698465 24.53753472213886 0.9381900756955258 1.0434872276823424 0.12365140955618803 0.1378157375332097 478.11941342895625 597402.3539809735 0.06283917421723716 0.04235978395616855 1.046256280318069e-07 6.9803619220698465 0.10529715198681655 ELSKEDLSPAFDHS(ph)PNK ddPTM_KYSE-520_SHP099_60min_R1 8 ELSKEDLSPAFDHSPNK 17 1 K7EIY0;K7ENP9;K7EIE9;D3DUJ3;K7EQG9;P17706-3;P17706-2;P17706-4;P17706 K7EIY0 PTPN2 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 2 1 ELSKEDLSPAFDHS(1)PNK;ELSKEDLSPAFDHS(1)PNK;ELSKEDLSPAFDHS(1)PNK;ELSKEDLSPAFDHS(1)PNK;ELSKEDLS(0.001)PAFDHS(0.999)PNK;ELSKEDLSPAFDHS(1)PNK;ELSKEDLSPAFDHS(1)PNK;ELSKEDLS(0.001)PAFDHS(0.999)PNK 219.22 2.489e-18 11172970000.0 7211140.0 7315180.0 6429690.0 6686420.0 6551220.0 6368750.0 6119100.0 6009850.0 8004630.0 6222490.0 True False 6811123.689148797 6963747.772490969 6844158.105267738 7321895.3464545235 7066763.742657098 6329000.268882142 6737678.344660992 5989003.23305953 6551190.972301358 6167363.579623966 1.1043817347904892 1.1291287894065685 1.1097380617999884 1.1872002115531108 1.1458321941655287 1.0262083931280135 1.0924730247656 0.9710799688940488 1.0622352465071947 1.0 22.55622246818736 -6.2625055482670895 24.979496404709174 1.0324714272696156 1.1363838934584667 0.6654201207631067 0.03715770653143569 59.5488665537 1395181.043076758 0.012619748921962982 0.011753039145714012 5.463795696431567e-07 6.2625055482670895 0.10391246618885108 ELSLDEAFPDQQNGSATNAWDQSSCSS(ph)PKWECTELIHDIPLPEHR ddPTM_KYSE-520_SHP099_60min_R1 1 ELSLDEAFPDQQNGSATNAWDQSSCSSPKWECTELIHDIPLPEHR 45 1 Q96HI0-2;Q96HI0 Q96HI0-2 SENP5 Sentrin-specific protease 5 1 ELSLDEAFPDQQNGSATNAWDQS(0.024)S(0.129)CS(0.129)S(0.716)PKWECT(0.002)ELIHDIPLPEHR 152.68 3.1942e-09 501220000.0 135250.0 146250.0 156290.0 136970.0 157070.0 132220.0 124340.0 151210.0 253530.0 129450.0 True False 127747.41288580939 139223.93047427447 166364.70347284176 149987.58761846786 169430.51539394984 131394.76593548138 136909.50064145843 150685.48780267942 207495.3429712006 128303.17371057595 0.9956683781960044 1.0851168092562806 1.2966530652478194 1.1690091778774485 1.3205481243678994 1.0240959918254195 1.0670780517892449 1.1744486394591696 1.6172268929158755 1.0 16.9691973318471 -7.55163443761936 24.999426598941543 1.3376883462760338 1.143266256477513 0.13031992223365674 0.17116278113559075 360.63393684060566 313518.8964065086 0.10993446328163343 0.04155291507229923 2.807796073557927e-08 7.55163443761936 -0.19442208979852094 ELSLKAS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 8 ELSLKASPLR 10 1 Q86W50 Q86W50 METTL16 Methyltransferase-like protein 16 1 ELSLKAS(1)PLR;ELSLKAS(1)PLR;ELSLKAS(1)PLR;ELS(0.003)LKAS(0.997)PLR;ELSLKAS(1)PLR;ELSLKAS(1)PLR;ELSLKAS(1)PLR;ELSLKAS(1)PLR 149.71 0.00010503 14630850000.0 15673550.0 14320800.0 12717760.0 10124520.0 10248350.0 12009140.0 9749780.0 10527500.0 13778070.0 11605270.0 True False 14804106.93705269 13632807.272040963 13537567.158735478 11086751.336752055 11054836.839864926 11934186.502695693 10735382.911083143 10490982.559636964 11276319.80487994 11502456.336563444 1.2870387423244651 1.1852083479513558 1.1769283675264146 0.9638594585671266 0.9610848775599655 1.0375337365776287 0.9333122071464018 0.9120645410570908 0.9803401530015226 1.0 23.455438644178628 -5.153386590256681 2.476268048971116 0.964715696259327 1.2359122708061119 0.8870085666492764 0.04056935076103164 0.09106309357368768 1.0858340371174169 0.012135200084110573 0.024732782223350066 7.024467536307924e-06 5.153386590256681 0.2711965745467849 ELSNS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 8 ELSNSPLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ELS(0.108)NS(0.892)PLR;ELS(0.095)NS(0.905)PLR;ELSNS(1)PLR;ELS(0.001)NS(0.999)PLR;ELS(0.001)NS(0.999)PLR;ELS(0.001)NS(0.999)PLR;ELS(0.005)NS(0.995)PLR;ELS(0.001)NS(0.999)PLR 179.08 4.6885e-05 23400200000.0 20126800.0 17347200.0 17217700.0 16252900.0 16824500.0 18530200.0 17986000.0 18566200.0 18998700.0 18578500.0 True False 19010326.28221892 16513814.473321952 18327580.491294026 17797570.729387455 18148492.431689758 18414546.148371328 19804200.40644419 18501798.18558365 15549014.998252477 18413908.943854287 1.0323895018805167 0.896811998130006 0.9953117801970519 0.9665286595938916 0.9855860853350688 1.0000346045219939 1.0755022448969975 1.0047729812283392 0.8444168506351836 1.0 24.134292581790064 -3.9142226001543614 20.367784299413778 0.978348032146721 4.051396564883203 0.07400719756636309 0.06011811382759961 1673.141438978401 389033.02510678093 0.014612925533100899 4921.834301615153 0.00012183649588344203 3.9142226001543614 3.073048532736482 ELSNS(ph)PLRENS(ph)FGS(ph)PLEFR ddPTM_KYSE-520_SHP099_60min_R1 4 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 ELS(0.462)NS(0.538)PLRENS(1)FGS(1)PLEFR;ELS(0.029)NS(0.971)PLRENS(1)FGS(1)PLEFR;ELS(0.121)NS(0.879)PLRENS(1)FGS(1)PLEFR;ELS(0.032)NS(0.968)PLRENS(1)FGS(1)PLEFR 169.44 5.3648e-08 1438390000.0 711720.0 713140.0 652660.0 613900.0 639700.0 665780.0 605230.0 635790.0 833630.0 623320.0 True False 672239.472821355 678879.6839550363 694731.5078929216 672244.8714242344 690040.750604887 661624.6200614482 666412.5548755823 633584.5928845017 682263.806102165 617797.8697356217 1.088122031092517 1.098870224731519 1.1245288174758883 1.0881307695539846 1.1169361119684351 1.0709402742754381 1.078690276418021 1.0255532171964847 1.10434794214187 1.0 19.236775370771166 -8.597899569295768 0.2790225749247981 0.9783805609231756 1.112915735294883 0.5862676096718393 0.02395925937407489 2.7612588944048913 0.4402757016261518 0.11275079383018095 0.03717707686725217 2.524064395499895e-09 8.597899569295768 0.13453517437170748 ELSNS(ph)PLRENS(ph)FGSPLEFR ddPTM_KYSE-520_SHP099_60min_R1 9 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ELS(0.02)NS(0.98)PLRENS(0.677)FGS(0.323)PLEFR;ELS(0.314)NS(0.686)PLRENS(0.922)FGS(0.078)PLEFR;ELS(0.187)NS(0.813)PLRENS(0.668)FGS(0.332)PLEFR;ELS(0.073)NS(0.927)PLRENS(0.622)FGS(0.378)PLEFR;ELS(0.053)NS(0.947)PLRENS(0.968)FGS(0.032)PLEFR;ELS(0.044)NS(0.956)PLRENS(0.966)FGS(0.034)PLEFR;ELS(0.02)NS(0.98)PLRENS(1)FGSPLEFR;ELS(0.478)NS(0.522)PLRENS(0.793)FGS(0.207)PLEFR;ELS(0.019)NS(0.981)PLRENS(0.552)FGS(0.448)PLEFR 227.03 2.7004999999999996e-19 12663810000.0 3816190.0 3820590.0 3704210.0 3461580.0 3494310.0 3554940.0 3150340.0 3463210.0 4623310.0 3615900.0 True False 3604498.3333138353 3637043.1215774966 3942989.30354555 3790567.522438027 3769292.317095774 3532752.30082196 3468807.111555513 3451196.9328292864 3783833.448160702 3583865.939127632 1.0057570217571323 1.014837938514745 1.100205579817345 1.0576755902205175 1.0517392059629547 0.9857378486880249 0.967895331598222 0.9629815934658986 1.0557965929612159 1.0 21.773085241158 -6.260834165827504 24.831564691584376 0.9905069376592178 1.0479647303156694 0.3656536128014033 0.03370617149489319 54.15572036020587 2221971.3799621803 0.011971695083116417 0.01128689709643011 5.484863629724919e-07 6.260834165827504 0.05745779265645157 ELSNS(ph)PLRENSFGS(ph)PLEFR ddPTM_KYSE-520_SHP099_60min_R1 9 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 ELS(0.015)NS(0.985)PLRENS(0.18)FGS(0.82)PLEFR;ELS(0.073)NS(0.927)PLRENS(0.252)FGS(0.748)PLEFR;ELS(0.005)NS(0.995)PLRENSFGS(1)PLEFR;ELS(0.086)NS(0.914)PLRENS(0.002)FGS(0.998)PLEFR;ELS(0.002)NS(0.998)PLRENS(0.003)FGS(0.997)PLEFR;ELS(0.019)NS(0.981)PLRENSFGS(1)PLEFR;ELS(0.145)NS(0.855)PLRENS(0.105)FGS(0.895)PLEFR;ELS(0.003)NS(0.997)PLRENS(0.002)FGS(0.999)PLEFR;ELS(0.046)NS(0.954)PLRENS(0.014)FGS(0.986)PLEFR 290.39 3.328199999999999e-43 22076530000.0 12809900.0 13245700.0 12879970.0 10693320.0 11601510.0 11436850.0 10325950.0 10283660.0 15009510.0 10884610.0 True False 12099309.311097454 12609356.68979896 13710233.474880638 11709609.917736104 12514482.83343773 11365468.376865903 11369797.797560442 10247988.383684298 12284161.342956116 10788180.82349844 1.121533788601611 1.1688121376621439 1.270856847803059 1.0854109797854554 1.1600178971953379 1.0535111120968639 1.0539124235659032 0.9499273836199043 1.1386684691268043 1.0 23.362948272486324 -6.200988492677503 1.381741048459062 1.028719554319501 1.1754489073977479 0.4869923257228854 0.06264896340816857 0.3468514080321858 1.3393469535982616 0.027750788902214586 0.026346025762216473 6.295228628449304e-07 6.200988492677503 0.14672935307824697 ELSNS(ph)PLRENSFGSPLEFR ddPTM_KYSE-520_SHP099_60min_R1 12 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ELS(0.001)NS(0.999)PLRENSFGSPLEFR;ELS(0.063)NS(0.937)PLRENSFGSPLEFR;ELS(0.009)NS(0.991)PLRENSFGSPLEFR;ELS(0.03)NS(0.488)PLRENS(0.474)FGS(0.008)PLEFR;ELS(0.001)NS(0.999)PLRENSFGSPLEFR;ELS(0.119)NS(0.881)PLRENSFGSPLEFR;ELSNS(0.981)PLRENS(0.012)FGS(0.006)PLEFR;ELS(0.001)NS(0.999)PLRENSFGSPLEFR;ELSNS(1)PLRENSFGSPLEFR;ELS(0.008)NS(0.992)PLRENSFGSPLEFR;ELS(0.023)NS(0.976)PLRENS(0.001)FGSPLEFR;ELS(0.056)NS(0.941)PLRENS(0.003)FGSPLEFR 247.34 1.5819e-26 33241160000.0 8587664.0 9370580.0 9107662.0 7683016.0 8004122.0 7833259.0 6773589.0 7108219.0 10833590.0 7420479.0 True False 8111289.15883623 8920403.271272676 9694756.465294436 8413207.530657018 8634000.864175547 7784368.724981115 7458329.479978092 7083562.247359788 8866483.148579549 7354739.329105312 1.1028656211834704 1.2128782370262228 1.3181645237824875 1.1439164808143467 1.1739370326841827 1.0584153124469833 1.014084816094411 0.9631289336561012 1.2055468932109845 1.0 22.810242778884305 -6.178538987385177 2.2008294741948684 1.0404669637061263 1.2043649960320304 0.4472038629112679 0.07903640822815346 0.28678021767117795 2.727572432888907 0.030139202996806023 0.029347001392903443 6.62919833511265e-07 6.178538987385177 0.16389803232590405 ELSNSPLRENS(ph)FGSPLEFR ddPTM_KYSE-520_SHP099_60min_R1 2 ELSNSPLRENSFGSPLEFR 19 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ELS(0.001)NS(0.165)PLRENS(0.514)FGS(0.32)PLEFR;ELS(0.015)NS(0.317)PLRENS(0.667)FGS(0.001)PLEFR 118.66 5.262e-05 5408630000.0 426760.0 455490.0 376890.0 283280.0 350780.0 327920.0 269300.0 316240.0 477340.0 350850.0 True False 403086.77207503153 433607.57669557125 401184.932445321 310202.84602876264 378384.3903348167 325873.32964425255 296523.4721147236 315143.03725097055 390667.0887621701 347741.74195716984 1.15915555551763 1.2469241519730387 1.1536864403662348 0.8920494970861716 1.0881189822227928 0.937113065029706 0.8527117580012737 0.9062559918095355 1.123440305335237 1.0 18.407656729020573 -5.1344979091825484 4.967655670263922 0.9664909764777465 1.2021469917701415 0.5914371622345438 0.08237683699937146 0.1505013916526336 5.42524047950257 0.022847947697428855 0.04084183514701251 7.33672246517219e-06 5.1344979091825484 0.235656015292395 ELSNSVSTYRPFGLGSES(ph)PYK ddPTM_KYSE-520_SHP099_60min_R1 1 ELSNSVSTYRPFGLGSESPYK 21 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELSNSVSTYRPFGLGS(0.008)ES(0.992)PYK 126.99 3.0946e-05 619370000.0 208640.0 172330.0 157890.0 226470.0 197460.0 213300.0 196440.0 226990.0 220730.0 194370.0 True False 197066.32328647154 164051.00812739634 168067.84203293227 247993.64070931182 212998.97860628608 211968.71558038256 216298.07226964846 226202.62466986454 180650.99615048774 192648.03301757196 1.022934520533083 0.8515581787042321 0.8724088141486622 1.2872887245450964 1.105637961986655 1.10029005881959 1.122762941731771 1.174175625500583 0.9377256197264681 1.0 17.55560793024854 -5.232377231396174 24.969674692088756 1.1119379119450683 0.909226233384089 0.436598142166839 0.09767534562413444 599.5107155012479 515088.1062273625 0.02560358176227498 0.04433692256918828 5.856292616235015e-06 5.232377231396174 -0.20271167856097927 ELSNSVSTYRPFGLGSES(ph)PYKQPSDGMERPSSLMDSSQEK ddPTM_KYSE-520_SHP099_60min_R1 1 ELSNSVSTYRPFGLGSESPYKQPSDGMERPSSLMDSSQEK 40 3 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 ELSNSVS(0.008)T(0.006)YRPFGLGS(0.009)ES(0.976)PYKQPSDGMERPSSLMDSSQEK 155.5 1.5312e-07 432700000.0 471110.0 481460.0 384770.0 440010.0 395050.0 430100.0 444270.0 401960.0 523400.0 407000.0 True False 444976.58916549775 458329.9389138063 409572.88985376665 481828.4181061691 426138.1874729727 427415.5863625058 489181.14725736476 400565.69457816944 428363.7538402815 403394.29664120864 1.1030810124746848 1.1361834877934804 1.015316511076143 1.194435375309042 1.0563812900210465 1.0595479160744368 1.2126625272852025 0.9929879968889221 1.061898389260772 1.0 18.621831161100598 -7.311286463271035 24.999710476833645 1.0205823567163441 1.107488227132402 0.33449999693749144 0.059801522356885566 462.16616178973044 231786.85156800182 0.031077237718643506 0.014929067670685574 4.883301475646654e-08 7.311286463271035 0.0869058704160579 ELSPLISLPS(ph)PVPPLS(ph)PIHSNQQTLPR ddPTM_KYSE-520_SHP099_60min_R1 2 ELSPLISLPSPVPPLSPIHSNQQTLPR 27 0 E7ETI4;E7EMC5;A0A669KBI3;F5GXF9;P51825;P51825-3;P51825-2 E7ETI4 AFF1 AF4/FMR2 family member 1 2 ELSPLIS(0.009)LPS(0.991)PVPPLS(1)PIHSNQQTLPR;ELSPLIS(0.076)LPS(0.924)PVPPLS(1)PIHSNQQTLPR 147.26 8.836399999999999e-07 555040000.0 145355.0 147391.0 128101.0 120097.0 151002.0 132233.0 101350.0 131414.0 144499.0 124315.0 True False 137291.86839199113 140310.11512159856 136358.59542884695 131510.98277152027 162884.99831614693 131407.68479765902 111595.44708068056 130958.15550625823 118261.62412336032 123213.66581560648 1.114258450823573 1.1387544895513255 1.1066840234500637 1.0673408822064512 1.3219718546472756 1.0665025176210177 0.905706735872034 1.0628541455964928 0.9598093144987906 1.0 16.91080275085129 -6.522539606721376 24.9999333213714 0.9871552588239696 1.1474141441639312 0.5409280202171685 0.07279582770911944 10.010010089038683 738015.1700148594 0.02714624721407904 0.021268951839657702 3.0023436011055275e-07 6.522539606721376 0.16025888533996158 ELSPPLEQLIDHMANTVEADGS(ph)NDEGYEAAEEGLGDEDEKR ddPTM_KYSE-520_SHP099_60min_R1 1 ELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKR 41 1 Q08AE8-5;Q08AE8-2;Q08AE8;K7EQR2;K7ENV1;C9JYR7 Q08AE8-5 SPIRE1 Protein spire homolog 1 1 ELSPPLEQLIDHMANT(0.002)VEADGS(0.988)NDEGY(0.01)EAAEEGLGDEDEKR 68.161 0.0072309 80666000.0 14637.0 12801.0 12662.0 16651.0 14593.0 15163.0 12833.0 14132.0 15290.0 14457.0 True False 13825.056431863886 12186.020745307265 13478.21277991631 18233.50603369431 15741.386077187926 15068.362092570738 14130.284878010578 14082.979390433595 12513.721429533622 14328.922227375799 0.9648357505528738 0.8504492209487702 0.9406299068443413 1.272496684981561 1.098574325926173 1.0516047092350198 0.9861373140133514 0.9828359151484315 0.8733190976238124 1.0 13.806642478633409 -10.248738534497466 13.330832163897284 1.0000045329564047 1.0072169662623722 0.0 0.11422054306962545 0.0 0.0 0.1213141322549385 0.029422998892191878 5.6397709411107765e-11 10.248738534497466 0.007212433305967547 ELSPPLEQLIDHMANTVEADGS(ph)NDEGYEAAEEGLGDEDEKRK ddPTM_KYSE-520_SHP099_60min_R1 4 ELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRK 42 2 Q08AE8-5;Q08AE8-2;Q08AE8;K7EQR2;K7ENV1;C9JYR7 Q08AE8-5 SPIRE1 Protein spire homolog 1 1 ELSPPLEQLIDHMANTVEADGS(1)NDEGYEAAEEGLGDEDEKRK;ELSPPLEQLIDHMANTVEADGS(1)NDEGYEAAEEGLGDEDEKRK;ELSPPLEQLIDHMANTVEADGS(1)NDEGYEAAEEGLGDEDEKRK;ELSPPLEQLIDHMANTVEADGS(0.944)NDEGY(0.056)EAAEEGLGDEDEKRK 197.23 2.6806e-16 171703000.0 75823.0 84313.0 72546.7 76802.0 56508.1 59115.600000000006 58794.4 62721.0 103020.0 63939.8 True False 71616.94704059692 80262.47692360682 77223.17636082413 84101.23898863663 60954.96598289208 58746.63761258158 64737.91173004794 62503.43549019144 84314.16492286169 63373.34311641168 1.1300799913465573 1.2665021754678647 1.2185435163010327 1.327075941601337 0.9618392053410022 0.9269928762424413 1.0215322175939128 0.9862732880507458 1.3304358074969065 1.0 15.951588503180474 -5.765094860585313 24.999979248332604 1.030800920294106 1.2365464742900032 0.42008860894839206 0.11361444765235403 91.17250485617627 623532.3968319449 0.03506251467195352 0.04131690053212102 1.7175331947345321e-06 5.765094860585313 0.20574555399589722 ELSQCNCIDLSKS(ph)PDPDKSTGTDCR ddPTM_KYSE-520_SHP099_60min_R1 2 ELSQCNCIDLSKSPDPDKSTGTDCR 25 2 E9PKY2;A0A0C4DFM7;Q5TAX3;E9PKX1 E9PKY2 ZCCHC11 Terminal uridylyltransferase 4 1 ELSQCNCIDLS(0.035)KS(0.965)PDPDKSTGTDCR;ELS(0.032)QCNCIDLS(0.168)KS(0.8)PDPDKSTGTDCR 107.3 0.00056458 2087050000.0 735790.0 777190.0 734630.0 673280.0 712740.0 690440.0 632550.0 628720.0 993110.0 680570.0 True False 694974.2619390001 739852.6258140261 781985.4252495585 737268.3287709863 768828.5830641346 686130.7078542854 696494.3270930873 626539.1170643516 812786.2582658036 674540.6792754482 1.0302925876694353 1.096824325863834 1.159285791465566 1.0929931306187737 1.1397809008197473 1.0171821047046214 1.032546069484231 0.9288381506321353 1.2049477270056577 1.0 19.36354592431056 -6.270690471537051 24.73961373470252 1.0319953959173644 1.1059240811752384 0.17702875643813676 0.07194530196715543 954.3422913774438 2552128.102686376 0.024263563337364392 0.021682210417379735 5.361786642777073e-07 6.270690471537051 0.073928685257874 ELST(ph)PDKVLIPER ddPTM_KYSE-520_SHP099_60min_R1 3 ELSTPDKVLIPER 13 1 A0A1B0GUN5;Q5VTI5;Q9Y2H5 A0A1B0GUN5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 ELS(0.143)T(0.857)PDKVLIPER;ELS(0.148)T(0.852)PDKVLIPER;ELS(0.159)T(0.841)PDKVLIPER 217.88 6.8273e-11 1143400000.0 1191630.0 1196490.0 827540.0 840810.0 867750.0 1109300.0 932280.0 1172260.0 1361220.0 1210300.0 True False 1125527.9084444882 1139008.8244318962 880884.5525108159 920720.3296012566 936036.9881778826 1102376.447226059 1026523.9605759927 1168193.7036675413 1114056.7615637511 1199577.6835991517 0.9382701294238083 0.9495081810912589 0.7343288930383023 0.7675370609086144 0.7803054366345371 0.9189704529335231 0.8557377939009857 0.9738374760045156 0.9287074749683506 1.0 20.194095157646874 -7.144564599058643 1.2857121699293952 0.9766248492002094 0.8363776032830236 0.3649716216170219 0.07105093406136015 0.5696174475802024 1.7111602762398128 0.06233573956115576 0.02592400876229094 7.168617381727499e-08 7.144564599058643 -0.14024724591718585 ELTDFLQAETDKLEDEK ddPTM_KYSE-520_SHP099_60min_R1 5 ELTDFLQAETDKLEDEK 17 1 P15407 P15407 FOSL1 Fos-related antigen 1 0 ;;;; 189.87 3.0219e-12 292436000.0 464814.0 466980.0 362950.0 298232.0 516026.0 442474.0 379005.0 406621.0 421364.0 438051.0 False True 439029.8408362632 444545.5798487301 386346.3377405323 326575.8796132794 556634.3104136896 439712.3556386036 417318.52413234604 405210.52665705467 344854.919322041 434170.2089385209 1.011192918808555 1.0238970125001792 0.889849947754567 0.7521839888823947 1.2820647270446641 1.0127649170440145 0.9611864553135171 0.9332987807886032 0.7942850804184791 1.0 18.72790121169534 -7.285932780795691 2.926245629443153 0.8914754655197068 0.9924119186804199 0.07588071325646784 0.1327615541006169 0.735885199654927 12.55490115280045 0.08610154369309313 0.038310387484942296 5.176869522688794e-08 7.285932780795691 0.10093645316071309 ELTHIYR ddPTM_KYSE-520_SHP099_60min_R1 2 ELTHIYR 7 0 P22059 P22059 OSBP Oxysterol-binding protein 1 0 ; 112.17 0.004929 790660000.0 768260.0 688960.0 482330.0 458540.0 775390.0 690350.0 543600.0 552780.0 573790.0 561360.0 False True 725643.0863116585 655861.3274499563 513421.76355528564 502119.50373492175 836408.7816343975 686041.2695776698 598552.3930247448 550862.5351998223 469604.2000688093 556386.7871314719 1.3042061801158338 1.178786668949022 0.922778497674795 0.9024648236592163 1.5032865642741395 1.23302940588264 1.0757847002633967 0.9900712021575303 0.8440247161330303 1.0 19.08572863413321 -7.209514574336041 2.6465715946792727 0.9263897526752874 1.1640737158686694 0.270992574994926 0.1678918866240235 0.4387632235112742 5.978565097972809 0.11083169480055044 0.051982246973919344 6.17284576304719e-08 7.209514574336041 0.23768396319338192 ELTIGSK ddPTM_KYSE-520_SHP099_60min_R1 2 ELTIGSK 7 0 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 ; 124.08 0.017669 210720000.0 868130.0 1082610.0 739850.0 632530.0 950640.0 1130070.0 774070.0 962960.0 951830.0 934600.0 False True 819973.0983257506 1030599.7905692611 787541.9148018537 692645.4610229211 1025449.9595982966 1123016.8139518173 852320.5497951875 959619.7165165537 779001.6656816858 926320.1711077963 0.8851940440259829 1.1125740566965692 0.8501832728742416 0.7477387221251794 1.10701460637735 1.2123419622923568 0.9201144230465026 1.0359482028432287 0.840963729365916 1.0 19.821151403811786 -5.79229732226677 24.993532931138116 1.0258776280614474 0.9107015585076701 0.17616640797273897 0.12614469699061928 394.62876039696755 319629.326065143 0.04119526588876859 0.046715867488463916 1.6132537293376693e-06 5.79229732226677 -0.11517606955377735 ELTNRHS(ph)LPFSLPSQMEPRPDVPR ddPTM_KYSE-520_SHP099_60min_R1 2 ELTNRHSLPFSLPSQMEPRPDVPR 24 2 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 ELT(0.001)NRHS(0.999)LPFSLPSQMEPRPDVPR;ELT(0.089)NRHS(0.911)LPFSLPSQMEPRPDVPR 160.57 2.1999e-10 4563900000.0 950410.0 845190.0 979460.0 1270350.0 730660.0 926600.0 786640.0 897410.0 1017700.0 790220.0 True False 897688.8627046362 804585.8037439454 1042597.5587914096 1391083.6820553453 788158.7851132827 920816.7456951825 866161.248066565 894297.0941670677 832911.3341292581 783219.2655818568 1.1461526831030382 1.0272804042252655 1.331169449741331 1.7761101433350257 1.0063066879844387 1.1756819401155867 1.105898802710235 1.1418221352135542 1.0634459221460606 1.0 19.579056727143435 ELTNRHSLPFS(ph)LPSQMEPRPDVPR ddPTM_KYSE-520_SHP099_60min_R1 1 ELTNRHSLPFSLPSQMEPRPDVPR 24 2 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 ELT(0.306)NRHS(0.306)LPFS(0.389)LPSQMEPRPDVPR 60.99100000000001 0.017949 280140000.0 49763.0 45116.0 51148.0 46854.0 35772.0 47241.0 42233.0 40551.0 71998.0 52830.0 True False 47002.54718991889 42948.55963950336 54445.081919693504 51306.990072831235 38587.05288516185 46946.15139584083 46502.323794359916 40410.33804567455 58924.97812188103 52361.967301118086 0.8976467006982614 0.8202243317658211 1.0397829708459203 0.9798522232325613 0.736929013061316 0.8965696633563726 0.8880935188500252 0.7717498048399658 1.1253392712122718 1.0 15.676231681611991 -7.770757908435266 24.99992395206601 1.0626696734624772 0.8817998764268096 0.4034638200018015 0.0893459378412387 225.40068135366465 604687.2026676812 0.08325618152742202 0.022679485113330657 1.695282549353061e-08 7.770757908435266 -0.18086979703566763 ELTPAS(ph)PTCTNSVSK ddPTM_KYSE-520_SHP099_60min_R1 7 ELTPASPTCTNSVSK 15 0 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 ELTPAS(0.999)PTCT(0.001)NSVSK;ELTPAS(0.906)PT(0.077)CT(0.017)NSVSK;ELTPAS(1)PTCTNSVSK;ELTPAS(0.983)PT(0.013)CT(0.005)NSVSK;ELTPAS(1)PTCTNSVSK;ELTPAS(0.995)PT(0.004)CT(0.001)NSVSK;ELTPAS(0.998)PT(0.001)CTNSVSK 407.58 1.1775999999999997e-96 5075720000.0 4025140.0 4863260.0 3412470.0 2746520.0 2826110.0 4516070.0 3183870.0 4143870.0 4965050.0 4636950.0 True False 3801857.4602823383 4629621.68969792 3632443.2763450495 3007548.435028648 3048508.778633698 4487883.531978894 3505726.6511767767 4129495.8821565276 4063522.078725042 4595870.230492511 0.8272334225318013 1.0073438668875976 0.79037115805504 0.6544023839216078 0.6633148078045293 0.9765035361970948 0.7627993122863023 0.8985231686391623 0.8841681498673603 1.0 22.131906631784258 -7.962183205434788 0.9243150782145703 0.9972864859252507 0.8095408669489003 0.22071775571683439 0.10863626240499284 0.9938899106700891 1.9224077628147986 0.11144186842605229 0.03882116712038503 1.0909800136955677e-08 7.962183205434788 -0.18774561897635045 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(ph)SPQR ddPTM_KYSE-520_SHP099_60min_R1 3 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQR 38 1 O00139-1;O00139-5;O00139;O00139-4;H0Y8H2;O00139-2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.887)S(0.113)PQR;ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.5)S(0.5)PQR;ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.5)S(0.5)PQR 298.76 2.9666e-54 5050510000.0 1882810.0 1737060.0 1561729.0 1869180.0 1875940.0 1673310.0 1915560.0 2142420.0 1983610.0 1969940.0 True False 1778366.7760113184 1653609.0302197824 1662400.5501947494 2046826.305210539 2023565.8053614711 1662866.251607171 2109203.498864016 2134988.4450645875 1623436.426738863 1952487.8641901272 0.9108209114267491 0.8469241015772885 0.8514268286549872 1.0483170434759872 1.0364037812858962 0.8516653455855981 1.0802645883481037 1.0934707888441395 0.8314706874822234 1.0 20.896882150558454 -5.250923076475188 24.628119244286097 0.9952742173391494 0.8674439501267766 0.3034894081038024 0.08450309359981995 705.3617176372725 1651881.3883499722 0.022860265716801137 0.03904562827486548 5.611473593128177e-06 5.250923076475188 -0.1278302672123729 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(ph)SPQRDDLK ddPTM_KYSE-520_SHP099_60min_R1 7 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQRDDLK 42 2 O00139-1;O00139-5;O00139;O00139-4;H0Y8H2;O00139-2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ELTVDPTAAGDVRPIMHHPPNQIDDLET(0.004)QWGVGS(0.498)S(0.498)PQRDDLK;ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.866)S(0.134)PQRDDLK;ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.588)S(0.412)PQRDDLK;ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.5)S(0.5)PQRDDLK;ELTVDPTAAGDVRPIMHHPPNQIDDLET(0.005)QWGVGS(0.497)S(0.497)PQRDDLK;ELTVDPTAAGDVRPIMHHPPNQIDDLET(0.079)QWGVGS(0.461)S(0.461)PQRDDLK;ELTVDPTAAGDVRPIMHHPPNQIDDLET(0.008)QWGVGS(0.496)S(0.496)PQRDDLK 290.25 2.6908e-54 54173740000.0 6838167.0 6758320.0 6468470.0 7019300.0 7065263.0 6235240.0 5519416.0 6836652.0 8176690.0 5546208.0 True False 6458840.244962045 6433640.162754867 6885437.926117938 7686412.161570501 7621259.002252525 6196323.554315166 6077372.433589148 6812937.249898565 6692009.21358099 5497072.9120045295 1.1749599010879417 1.170375628219349 1.2525644167974361 1.3982736421023056 1.3864213053476495 1.1272041782061157 1.1055651854857806 1.239375456530774 1.2173768332173571 1.0 22.390232184426562 -6.2914473659712735 24.689899609584224 1.1508440828476274 1.2760554889007236 0.3525240503159601 0.09310513244329932 841.7732001392626 692589.2961684266 0.03573643980895171 0.0315210584853949 5.111550243742725e-07 6.2914473659712735 0.12521140605309622 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 4 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQR 38 1 O00139-1;O00139-5;O00139;O00139-4;H0Y8H2;O00139-2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.162)S(0.837)PQR;ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.007)S(0.993)PQR;ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.04)S(0.96)PQR;ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.229)S(0.771)PQR 270.67 5.2027999999999996e-42 6664210000.0 1057658.0 955530.0 676347.0 1026273.0 980515.0 860064.0 894172.0 1000297.0 999413.0 908926.0 True False 998987.60235105 909624.9045202304 719945.4098134615 1123809.6773597708 1057675.9521327985 854696.0215514574 984563.6320377524 996827.2031780754 817944.7923515043 900873.622773727 1.1089098149807481 1.0097142168726827 0.7991636025448273 1.2474665135600698 1.174055855777293 0.948741310595717 1.0928987231376024 1.10651169928687 0.9079462109603225 1.0 19.78096520912658 -5.262446372836042 24.99983881803247 1.0731278482579887 0.9763077254513963 0.11928210564402164 0.11843556733572977 203.5933698553602 5054516.802238056 0.03352280179465862 0.0531273138395615 5.46454022464308e-06 5.262446372836042 -0.09682012280659236 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSS(ph)PQRDDLK ddPTM_KYSE-520_SHP099_60min_R1 2 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQRDDLK 42 2 O00139-1;O00139-5;O00139;O00139-4;H0Y8H2;O00139-2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.148)S(0.852)PQRDDLK;ELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.159)S(0.841)PQRDDLK 163.12 2.7882999999999996e-10 4382406000.0 1086155.0 1095536.0 934547.0 1042658.0 970602.0 898106.0 766522.0 1124299.0 1266160.0 894445.0 True False 1025903.8169536871 1042904.8061269386 994789.3949480694 1141751.9028334422 1046982.8554300541 892500.5873184954 844009.5242938071 1120399.0691823591 1036257.2612961616 886520.913167679 1.1572246088227869 1.176401809180649 1.1221273860235625 1.287901825974734 1.181001869080583 1.006745102187663 0.9520469418798345 1.2638157233978797 1.1689033455437063 1.0 19.757795139364976 -6.133465171199557 9.3733962699515 1.087002119008396 1.187292661187231 0.24685262373639116 0.09251502747662417 0.6027862649388821 42.8376968398884 0.03259245174184783 0.03260984429105048 7.354189709738529e-07 6.133465171199557 0.10029054217883493 ELVEPLT(ph)PS(ph)GEAPNQALLR ddPTM_KYSE-520_SHP099_60min_R1 4 ELVEPLTPSGEAPNQALLR 19 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 2 ELVEPLT(1)PS(1)GEAPNQALLR;ELVEPLT(1)PS(1)GEAPNQALLR;ELVEPLT(1)PS(1)GEAPNQALLR;ELVEPLT(1)PS(1)GEAPNQALLR 184.78 2.2237e-10 933103000.0 735070.0 917660.0 802940.0 1157740.0 1124550.0 1092140.0 1106250.0 1372980.0 1699690.0 1183470.0 True False 694294.2017742845 873574.2361642586 854698.7971494243 1267771.2615127775 1213045.6871857522 1085323.5491512374 1218080.545959573 1368217.4528359408 1391069.1416981025 1172985.3765257269 0.5919035442971328 0.7447443537205075 0.728652559745427 1.0808073884670222 1.0341524382671166 0.9252660526475311 1.0384447839984279 1.1664403326906538 1.1859219812426982 1.0 20.161753596888957 -4.875416831524767 0.8068045033024862 1.0877666670415915 0.5076102247455541 0.7954261059580069 0.08545788242628825 0.5627971480545971 0.4983848072436851 0.03826221613582499 0.25164533681938567 1.3322421455757921e-05 4.875416831524767 -0.5801564422960375 ELVEPLT(ph)PSGEAPNQALLR ddPTM_KYSE-520_SHP099_60min_R1 15 ELVEPLTPSGEAPNQALLR 19 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 ELVEPLT(0.991)PS(0.009)GEAPNQALLR;ELVEPLT(0.982)PS(0.018)GEAPNQALLR;ELVEPLT(0.996)PS(0.004)GEAPNQALLR;ELVEPLT(0.981)PS(0.019)GEAPNQALLR;ELVEPLT(0.997)PS(0.003)GEAPNQALLR;ELVEPLT(0.926)PS(0.074)GEAPNQALLR;ELVEPLT(0.962)PS(0.038)GEAPNQALLR;ELVEPLT(0.972)PS(0.028)GEAPNQALLR;ELVEPLT(0.912)PS(0.088)GEAPNQALLR;ELVEPLT(0.987)PS(0.013)GEAPNQALLR;ELVEPLT(0.972)PS(0.028)GEAPNQALLR;ELVEPLT(0.999)PS(0.001)GEAPNQALLR;ELVEPLT(1)PSGEAPNQALLR;ELVEPLT(0.979)PS(0.021)GEAPNQALLR;ELVEPLT(0.958)PS(0.042)GEAPNQALLR 396.67 7.082599999999999e-92 242552490000.0 9837328.0 22720840.0 13673950.0 22011210.0 20343510.0 37846740.0 31099000.0 53519630.0 58570430.0 38453010.0 True False 9291631.805612808 21629296.741723843 14555394.696093574 24103148.780488424 21944428.498261716 37610524.45712462 34242790.41699142 53333982.8951056 47935516.35238717 38112346.24738906 0.24379584886483716 0.5675141751002954 0.3819076002724632 0.63242364099113 0.5757826704191702 0.9868330911194212 0.898469755567391 1.3993886009775458 1.2577424659514647 1.0 25.183755089346153 -6.356598359572202 0.9736960442000518 1.2350001436310334 0.41382179053551643 0.8261669554887389 0.14856225444698679 0.2024825524722549 0.40363363973353844 0.08720686007318874 0.07246153869381734 4.399482964964333e-07 6.356598359572202 -0.821178353095517 down ELVEPLTPS(ph)GEAPNQALLR ddPTM_KYSE-520_SHP099_60min_R1 9 ELVEPLTPSGEAPNQALLR 19 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 ELVEPLT(0.15)PS(0.85)GEAPNQALLR;ELVEPLT(0.027)PS(0.973)GEAPNQALLR;ELVEPLT(0.359)PS(0.641)GEAPNQALLR;ELVEPLT(0.068)PS(0.932)GEAPNQALLR;ELVEPLT(0.005)PS(0.995)GEAPNQALLR;ELVEPLT(0.005)PS(0.995)GEAPNQALLR;ELVEPLT(0.015)PS(0.985)GEAPNQALLR;ELVEPLT(0.435)PS(0.565)GEAPNQALLR;ELVEPLT(0.002)PS(0.998)GEAPNQALLR 360.94 8.034799999999999e-78 19718097000.0 3172410.0 5605128.0 3578412.0 4818829.0 4591029.0 6972790.0 5757921.0 8678669.0 9928060.0 7221478.0 True False 2996430.0932574538 5335849.237411348 3809082.163181636 5276809.059326238 4952316.862918255 6929270.231184879 6339987.846573636 8648564.722855581 8125374.570025881 7157501.323144862 0.4186419195715751 0.7454904996185013 0.5321804343737099 0.7372417860773394 0.6919058256970474 0.9681130213386111 0.8857822807621882 1.2083217777255786 1.1352250182268573 1.0 22.77102460124728 -6.337122633833834 0.8768083606242126 1.124924109388824 0.5740422806759646 0.7936161402726735 0.10941360570020262 0.24551586753076066 0.40253833043495707 0.06775337427441319 0.058414149678739244 4.601266270537765e-07 6.337122633833834 -0.5508818287128594 ELVGPPLAET(ph)VFTPKT(ph)SPENVQDR ddPTM_KYSE-520_SHP099_60min_R1 1 ELVGPPLAETVFTPKTSPENVQDR 24 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 2 ELVGPPLAET(0.606)VFT(0.392)PKT(0.501)S(0.501)PENVQDR 88.95100000000001 0.0020031 213390000.0 180240.0 189670.0 173290.0 160870.0 161550.0 162310.0 139770.0 153280.0 225780.0 154830.0 True False 170241.72790046802 180557.9684995256 184460.5506738035 176159.03643267072 174263.06590623644 161296.96308416268 153899.31562374643 152748.30745582085 184784.04345062817 153458.32665591716 1.109367810859703 1.176592840767585 1.2020237330451233 1.147927520594258 1.1355725668569778 1.0510799029225781 1.0028736724649556 0.9953732116362228 1.204131750145753 1.0 17.22748740306483 -6.1699233842896275 3.015184391130778 1.046559527166663 1.161969688828963 0.4276827440766172 0.06027504123079083 0.25482864487751783 4.488288946185711 0.021390332791563334 0.02110066322451927 6.762022565453462e-07 6.1699233842896275 0.1154101616623 ELVGPPLAETVFT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 ELVGPPLAETVFTPK 15 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 ELVGPPLAET(0.083)VFT(0.917)PK;ELVGPPLAETVFT(1)PK;ELVGPPLAETVFT(1)PK;ELVGPPLAETVFT(1)PK;ELVGPPLAETVFT(1)PK;ELVGPPLAETVFT(1)PK 225.7 6.945800000000001e-14 3986115000.0 1761620.0 2004390.0 1371000.0 1367840.0 1430730.0 1936520.0 1465160.0 1761650.0 1853730.0 1882090.0 True False 1663899.4268975921 1908096.0957492723 1459376.85367756 1497839.1023439083 1543320.3112598585 1924433.4603643788 1613272.671383618 1755539.2473222024 1517139.3607305018 1865416.146843862 0.891972244216273 1.0228795858648598 0.7823331304099149 0.8029517193137492 0.827332986192403 1.0316376126690923 0.8648325866124559 0.9410979154932465 0.8132980746936188 1.0 20.8310660797059 ELVGPPLAETVFT(ph)PKT(ph)SPENVQDR ddPTM_KYSE-520_SHP099_60min_R1 5 ELVGPPLAETVFTPKTSPENVQDR 24 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 2 ELVGPPLAET(0.203)VFT(0.792)PKT(0.563)S(0.442)PENVQDR;ELVGPPLAET(0.033)VFT(0.967)PKT(0.778)S(0.223)PENVQDR;ELVGPPLAET(0.014)VFT(0.985)PKT(0.797)S(0.204)PENVQDR;ELVGPPLAET(0.002)VFT(0.997)PKT(0.628)S(0.372)PENVQDR;ELVGPPLAET(0.003)VFT(0.997)PKT(0.915)S(0.085)PENVQDR 121.7 0.00014195 2923990000.0 1476010.0 1504860.0 1513810.0 1208930.0 1438350.0 1379120.0 1206410.0 1142860.0 1756650.0 1287310.0 True False 1394132.7829470113 1432564.2667590892 1611392.614781637 1323826.3437219416 1551539.9619079884 1370512.4005214118 1328365.6962269745 1138895.6854055293 1437686.641542853 1275905.4349120238 1.0926615286681802 1.1227824786700336 1.2629404740271724 1.037558354638737 1.216030529735121 1.0741488851921939 1.0411161045948267 0.8926176299923501 1.1267971765023357 1.0 20.28308997551229 -6.628577111256308 2.8166353207415673 1.0039320877780062 1.1456284771987317 0.3749474336344407 0.07928429273135223 0.2659343234483542 4.2629440799441 0.03217162460965156 0.023742747319758763 2.3519218602884281e-07 6.628577111256308 0.1416963894207255 ELVGPPLAETVFT(ph)PKTS(ph)PENVQDR ddPTM_KYSE-520_SHP099_60min_R1 4 ELVGPPLAETVFTPKTSPENVQDR 24 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 2 ELVGPPLAET(0.002)VFT(0.998)PKT(0.204)S(0.796)PENVQDR;ELVGPPLAETVFT(1)PKT(0.293)S(0.707)PENVQDR;ELVGPPLAETVFT(0.999)PKT(0.393)S(0.608)PENVQDR;ELVGPPLAETVFT(1)PKT(0.087)S(0.913)PENVQDR 209.46 6.0279e-21 3855540000.0 1681780.0 1656890.0 1719300.0 1405990.0 1592520.0 1445380.0 1292760.0 1463490.0 2017830.0 1453610.0 True False 1588488.3108546871 1577290.517357407 1830128.8289772624 1539614.8668736927 1717842.2638006825 1436358.8472835107 1423444.796921759 1458413.4947711346 1651442.9373548608 1440732.146291468 1.1025563044064453 1.0947840106278244 1.2702769447382187 1.0686336602100222 1.192339789337326 0.9969645301389196 0.9880009969832297 1.0122724744673597 1.146252578319832 1.0 20.45837071112661 -6.266411706048653 24.996411867968586 1.0269215729892922 1.14552593095598 0.4282760074708363 0.06758653876323117 413.1838781842741 2077112.5304200985 0.023257881221391247 0.021149698160762034 5.41487323413724e-07 6.266411706048653 0.11860435796668778 ELVLS(ph)S(ph)PEDLTQDFEEMKR ddPTM_KYSE-520_SHP099_60min_R1 1 ELVLSSPEDLTQDFEEMKR 19 1 E9PGC8;P78559;P78559-2 E9PGC8 MAP1A Microtubule-associated protein 1A;MAP1A heavy chain;MAP1 light chain LC2 2 ELVLS(0.998)S(0.994)PEDLT(0.008)QDFEEMKR 53.342 0.042267 9461900.0 30985.0 28449.0 29099.0 28119.0 28215.0 30953.0 29820.0 31377.0 35756.0 26465.0 True False 29266.200282933853 27082.2673371804 30974.768100046163 30791.42130571438 30435.359978610122 30759.81084556764 32834.49661515433 31268.160510446847 29263.611735409027 26230.540689458438 1.1157299664316638 1.0324708002707796 1.180866550436543 1.1738767290484742 1.1603024252886074 1.1726716276927311 1.2517659092078837 1.1920516957934053 1.115631281941875 1.0 14.678959925694501 -4.7723169025753025 24.994853753968158 1.1675774039537428 1.0741003802350182 0.18543195536134427 0.06498345527726292 244.75990377555212 562423.1795915468 0.01611540296713684 0.03408973103916872 1.6892078750335673e-05 4.7723169025753025 -0.09347702371872457 ELVSSKVS(ph)GAQEMVSSAK ddPTM_KYSE-520_SHP099_60min_R1 1 ELVSSKVSGAQEMVSSAK 18 1 K7ERZ3;O60664-3;O60664;K7ER39;K7EL96 K7ERZ3 PLIN3 Perilipin-3 1 ELVSS(0.001)KVS(0.999)GAQEMVSSAK 171.06 6.157600000000001e-07 0.0 242380.0 216170.0 181640.0 179040.0 205490.0 202170.0 198800.0 217000.0 244110.0 192580.0 True False 228934.69822744894 205784.8687222149 193348.80503427546 196055.90776966122 221660.89392183567 200908.1820388464 218896.64410102874 216247.2776481809 199785.77751232532 190873.89102497295 1.1994028989407268 1.0781195249762634 1.0129662260040515 1.0271489029581855 1.161294992895779 1.0525702649010316 1.1468129188626925 1.1329327258272752 1.0466899188752137 1.0 17.542260249442332 ELVVNCCTEFIHLISSEANEICNK ddPTM_KYSE-520_SHP099_60min_R1 1 ELVVNCCTEFIHLISSEANEICNK 24 0 Q01658 Q01658 DR1 Protein Dr1 0 65.438 0.047621 10638000.0 6251.1 7736.3 6075.6 7288.5 7450.6 6028.3 6779.6 6543.1 7676.4 6801.2 False True 5904.339021741096 7364.636535576961 6467.242897303706 7981.19684863257 8036.919831884907 5990.675143615652 7464.948130519795 6520.403513271018 6282.559266296393 6740.94665925353 0.8758916692562767 1.092522594800134 0.9593968361143903 1.183987539446927 1.1922538833403094 0.8886993839940931 1.1074035306706371 0.9672830602093899 0.9319995519727347 1.0 12.71873549397837 -7.379931260579333 8.212798511200958 0.9608361033401477 1.0467467544477642 0.09919517887238993 0.10486032258728527 0.677037961836975 43.165097666593354 0.05764483243189011 0.027515085987072228 4.1693537009689644e-08 7.379931260579333 0.08591065110761653 EMDEEDKAFK ddPTM_KYSE-520_SHP099_60min_R1 1 EMDEEDKAFK 10 1 Q9Y2S6 Q9Y2S6 TMA7 Translation machinery-associated protein 7 0 116.55 0.00063496 542170000.0 663000.0 691880.0 469890.0 347860.0 613050.0 580200.0 442320.0 502150.0 552490.0 645140.0 False True 626222.0683422661 658641.0462669469 500179.8612505829 380920.50981207733 661293.5472226456 576578.756585738 487034.0222271986 500408.1588526909 452171.74313950486 639424.5615113255 0.9793525398244722 1.030052778564217 0.7822343578238098 0.5957239254490703 1.0342010411042566 0.9017150595888169 0.7616754994147534 0.7825913938462741 0.7071541669759521 1.0 19.286414636275012 -4.760405282936194 24.999249114092432 0.8132783233281279 1.0047026985662855 0.25635868877463264 0.12487541312368754 34.689846387144556 838515.8643977458 0.03274729419913465 0.07715385228320044 1.7361798721689437e-05 4.760405282936194 0.19142437523815758 EMDMSPEEVVAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 EMDMSPEEVVASPR 14 0 Q13049 Q13049 TRIM32 E3 ubiquitin-protein ligase TRIM32 1 EMDMSPEEVVAS(1)PR;EMDMSPEEVVAS(1)PR;EMDMSPEEVVAS(1)PR;EMDMSPEEVVAS(1)PR;EMDMSPEEVVAS(1)PR 268.92 7.2911e-25 1978140000.0 1985210.0 1894040.0 1619070.0 1565120.0 1627820.0 1790110.0 1538290.0 1672820.0 2057300.0 1682940.0 True False 1875086.443881979 1803047.4753880007 1723437.842803595 1713868.5342295126 1755920.1729711557 1778937.2594824107 1693795.3654636405 1667017.3778591247 1683746.1803125914 1668030.4609075068 1.124132015468004 1.0809439741328446 1.033217248242543 1.0274803574612583 1.0526907116647208 1.0664896722057247 1.0154463033859202 0.9993926471535592 1.009421722068873 1.0 20.669714204269184 -1.0000000000000002 0.3639024195772577 1.0111832791504163 2.4039274997395537 0.753912481758529 0.01895390772658332 36.58345866302692 0.5094622952864629 0.01744703335500422 35.41446556014141 0.09999999999999995 1.0000000000000002 1.3927442205891374 EMDRETLIDVAR ddPTM_KYSE-520_SHP099_60min_R1 1 EMDRETLIDVAR 12 1 P40227-2;P40227 P40227-2 CCT6A T-complex protein 1 subunit zeta 0 125.53 0.00010506 214080000.0 319020.0 274980.0 224530.0 213480.0 280770.0 229010.0 185330.0 260070.0 273190.0 213340.0 False True 301323.3246493967 261769.54804660496 239003.56306070197 233769.07501489745 302865.0016372275 227580.66364305382 204064.96504649712 259167.8778707944 223585.58255946956 211449.97357600837 1.4250336358688747 1.2379738981263508 1.1303078407564289 1.1055526329061762 1.432324613312656 1.0762860822077476 0.9650744409913269 1.2256699468332315 1.0573923409789356 1.0 17.689956854516158 -6.457662237871047 24.993874485522074 1.0722453354470969 1.2488013520110863 0.4158588093164628 0.11827149223345214 233.0697230706107 89322.4201255206 0.04243359585332103 0.037422878829722506 3.486083314122868e-07 6.457662237871047 0.17655601656398945 EMDT(ph)ARTPLSEAEFEEIMNR ddPTM_KYSE-520_SHP099_60min_R1 1 EMDTARTPLSEAEFEEIMNR 20 1 F8WJN3;Q16630-3;Q16630;Q16630-2 F8WJN3 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 1 EMDT(0.608)ART(0.392)PLSEAEFEEIMNR 98.06200000000001 0.00068625 120130000.0 115940.0 150850.0 105870.0 100440.0 98807.0 135780.0 112480.0 116940.0 172220.0 149780.0 True False 109508.57707933999 143602.93956953386 112694.54959798913 109985.78740161289 106582.54876507295 134932.54665496646 123850.57609901257 116534.36243400106 140949.1893129025 148453.06572707684 0.7376646386048082 0.9673288919040602 0.759125781916637 0.7408791921065206 0.7179545147354475 0.9089239484150018 0.8342742906145525 0.7849912823507691 0.949452869986735 1.0 17.179647361386042 -7.872897451618227 4.202251285524276 0.9973779157322725 0.8094371200315948 0.44678817085950084 0.07560829452117458 0.1952682851070968 5.680302723890564 0.07335617582614314 0.019392403638285923 1.3399930577762728e-08 7.872897451618227 -0.18794079570067768 EMDTART(ph)PLSEAEFEEIMNR ddPTM_KYSE-520_SHP099_60min_R1 7 EMDTARTPLSEAEFEEIMNR 20 1 F8WJN3;Q16630-3;Q16630;Q16630-2 F8WJN3 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 1 EMDT(0.04)ART(0.957)PLS(0.003)EAEFEEIMNR;EMDT(0.028)ART(0.972)PLSEAEFEEIMNR;EMDT(0.012)ART(0.987)PLSEAEFEEIMNR;EMDT(0.262)ART(0.738)PLSEAEFEEIMNR;EMDT(0.282)ART(0.718)PLSEAEFEEIMNR;EMDT(0.031)ART(0.969)PLSEAEFEEIMNR;EMDT(0.006)ART(0.994)PLSEAEFEEIMNR 284.59 2.6643e-43 3239610000.0 719724.0 857110.0 617333.0 571431.0 590206.0 757301.0 593041.0 680470.0 855143.0 711543.0 True False 679799.4749857765 815933.1490516609 657127.2729477241 625739.6304330046 636651.8543872259 752574.4035524564 652991.3718024058 678109.6083928928 699870.5876007634 705239.2825920782 0.9639274098391134 1.1569593033058678 0.9317791693799012 0.8872727964516158 0.9027458766154347 1.0671192347459715 0.9259146334026696 0.9615312492244172 0.9923874135717705 1.0 19.427753311009806 -4.791165825452344 24.999265311536472 0.9553869379894004 1.0604435799160825 0.275878088103221 0.06583955502662509 217.04008981260236 182525.35326171093 0.016945363132083245 0.035282009925414186 1.617462328585851e-05 4.791165825452344 0.10505664192668207 EMEAELEDERK ddPTM_KYSE-520_SHP099_60min_R1 1 EMEAELEDERK 11 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 111.86 0.00071855 495930000.0 289370.0 280180.0 183450.0 167650.0 297290.0 296120.0 214270.0 238000.0 262110.0 261510.0 False True 273318.06925520615 266719.732241246 195275.4805303782 183583.4055941895 320685.0316512852 294271.8052398632 235930.50267367924 237174.43354961748 214517.4312553993 259193.22485170153 1.0544954229092454 1.0290382103693134 0.7533973183215181 0.708287825421469 1.2372431101729857 1.1353375668219416 0.9102494974884774 0.9150487389680723 0.8276351798089489 1.0 17.983668482008888 -11.020308305118201 2.824235492163347 1.053673060755181 0.9529647319280734 0.008145486381502698 0.15774452580558837 65153473.714683264 65058497.3681032 22761579.08242224 0.0417110240652965 9.543148785402784e-12 11.020308305118201 -0.10070832882710756 EMEDKVTS(ph)PEKAEEAK ddPTM_KYSE-520_SHP099_60min_R1 2 EMEDKVTSPEKAEEAK 16 2 P56211 P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 EMEDKVT(0.213)S(0.787)PEKAEEAK;EMEDKVT(0.201)S(0.799)PEKAEEAK 106.39 0.00040237 3424370000.0 1051250.0 924390.0 753180.0 973600.0 861660.0 874250.0 787660.0 889690.0 956540.0 842050.0 True False 992935.0668850793 879980.9168623228 801731.1879306096 1066130.651276486 929467.7398252416 868793.4814634282 867284.3596208065 886603.8730452063 782856.4484111237 834590.0921049869 1.189727839184764 1.0543869681496603 0.9606286912758558 1.27743027548711 1.113681732646689 1.0409822614502577 1.0391740422335458 1.0623225478378628 0.9380131106476695 1.0 19.670708268084073 -6.953337073654356 1.132482345031172 0.9875452758248384 1.1115484393769266 0.28549605865716 0.08264425923006857 0.7613959453845389 1.8527813361771253 0.06538842599666618 0.031487113837096896 1.1134300197080939e-07 6.953337073654356 0.12400316355208818 EMEHNTVCAAGTS(ph)PVGEIGEEK ddPTM_KYSE-520_SHP099_60min_R1 1 EMEHNTVCAAGTSPVGEIGEEK 22 0 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 EMEHNTVCAAGT(0.006)S(0.994)PVGEIGEEK 127.11 3.2731000000000004e-07 272480000.0 181320.0 256260.0 234920.0 471470.0 197200.0 210410.0 181910.0 206430.0 263480.0 191380.0 True False 171261.81814754126 243948.884945898 250063.31908529007 516278.3670473754 212718.51808548337 209096.7531423735 200299.23807051385 205713.9425111243 215638.6737902891 189684.52209138672 0.9028771365173921 1.2860769147435638 1.3183116699675363 2.7217738240057425 1.1214331867467777 1.1023395627484793 1.0559598424905388 1.0845056847179912 1.1368279889826651 1.0 17.533242436723288 -5.957082471003138 24.99999626242269 1.08350171063544 1.5709192472287195 0.21871489049433446 0.43893312927695644 227.74610004738204 132663.9302353761 0.1423239552584592 0.16138007997418344 1.103868979139401e-06 5.957082471003138 0.48741753659327935 EMEKS(ph)FDEQNVPK ddPTM_KYSE-520_SHP099_60min_R1 7 EMEKSFDEQNVPK 13 1 O95425-2;O95425-3;A0A6I8PIX7;O95425-4;O95425 O95425-2 SVIL Supervillin 1 EMEKS(1)FDEQNVPK;EMEKS(1)FDEQNVPK;EMEKS(1)FDEQNVPK;EMEKS(1)FDEQNVPK;EMEKS(1)FDEQNVPK;EMEKS(1)FDEQNVPK;EMEKS(1)FDEQNVPK 218.43 1.5784e-11 6609650000.0 9303060.0 9536210.0 8724540.0 7924630.0 9962080.0 7185930.0 8049290.0 8085870.0 10357460.0 8727330.0 True False 8787000.716609657 9078076.157456968 9286937.80815757 8677784.452573108 10746039.019518426 7141079.945384601 8862990.78670005 8057822.004226254 8476806.354318982 8650012.645959988 1.015836748020669 1.0494870388076147 1.0736328590796986 1.0032106087875017 1.2423148334398555 0.825557168256842 1.024621714378595 0.9315387542224787 0.9799761805294119 1.0 23.044270811235435 -6.275066899474362 24.970764012629925 0.9525776346741505 1.0710987206203806 0.38297959794734826 0.07887832030990045 865.8770651864864 1586609.8514102756 0.026452746844200858 0.023452648998741492 5.308026721698136e-07 6.275066899474362 0.11852108594623012 EMFPYEASTPT(ph)GISASCR ddPTM_KYSE-520_SHP099_60min_R1 1 EMFPYEASTPTGISASCR 18 0 G5E972;P42167;H0YJH7;P42167-2 G5E972 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 EMFPYEAS(0.073)T(0.293)PT(0.633)GIS(0.001)ASCR 146.81 0.0026236000000000002 0.0 134040.0 209500.0 112610.0 78261.0 119630.0 143710.0 126650.0 162760.0 204190.0 133240.0 True False 126604.53399788446 199435.30553408898 119869.02078237064 85698.90190997241 129044.20039840984 142813.05258348232 139453.01798488572 162195.42354846973 167114.24321101818 132059.5972591513 0.9586924133157703 1.5101916837041447 0.9076888258801963 0.6489411121086374 0.9771663936334433 1.0814288059899853 1.0559854859410611 1.2281986838880057 1.2654456524131017 1.0 17.010829625733976 -7.014026668493895 2.4658476688529185 1.1830203259785534 1.0121650802869948 0.08857526451392705 0.21055645658433186 0.7673138742014475 9.266273406468295 0.12380236013365602 0.06764927377408397 9.682183995553594e-08 7.014026668493895 -0.17085524569155863 EMGS(ph)LSIKDPK ddPTM_KYSE-520_SHP099_60min_R1 2 EMGSLSIKDPK 11 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 EMGS(0.996)LS(0.004)IKDPK;EMGS(0.988)LS(0.012)IKDPK 76.01 0.010541 1756020000.0 5139100.0 4312000.0 3855900.0 3943000.0 2792100.0 3243100.0 3027900.0 3415700.0 3351000.0 4716600.0 True False 4854023.878458138 4104845.0475560464 4104457.4836581387 4317741.534493826 3011822.3851241334 3222858.6099331337 3333989.6814562655 3403851.73393037 2742542.871835658 4674814.593459275 1.0383350572340564 0.8780765451744983 0.8779936405180334 0.9236177067931114 0.6442656334088839 0.6894088622129245 0.7131811571994722 0.7281255044195418 0.5866634530646119 1.0 22.15647771712635 -5.750352969234676 24.920225111426724 0.7107824701805602 0.9221528548997592 0.442888752856069 0.11028752904979872 178.98874081830712 402332.0414426693 0.030636752824311143 0.03917122988813142 1.776834715372922e-06 5.750352969234676 0.211370384719199 EMHS(ph)KPHR ddPTM_KYSE-520_SHP099_60min_R1 1 EMHSKPHR 8 1 Q5HYM0-2;Q5HYM0 Q5HYM0-2 ZC3H12B Probable ribonuclease ZC3H12B 1 EMHS(1)KPHR 45.68 0.056052 56520000.0 105660.0 87706.0 61742.0 64606.0 116650.0 94000.0 75678.0 83977.0 82964.0 57989.0 True False 99798.829172012 83492.47211061016 65721.9881106928 70746.1348154977 125829.6913522903 93413.31113247045 83328.27078610488 83685.70338737915 67899.82895224515 57475.26257475933 1.7363788298000637 1.4526679543570538 1.143483042382047 1.230897113753533 2.1892843236448183 1.6252785450256224 1.4498110500620678 1.4560299446831988 1.18137483693835 1.0 15.810653531435712 -7.841599840557182 1.7548897224366546 0.9990281445320693 1.5442626574607896 0.3173835909200825 0.27099272755365955 0.4518541814861226 2.9050340955457594 0.27725245741924737 0.08100558383804357 1.4401248998894737e-08 7.841599840557182 0.5452345129287203 EMIDKWEDRWEWLR ddPTM_KYSE-520_SHP099_60min_R1 4 EMIDKWEDRWEWLR 14 2 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ;;; 171.67 1.4264e-08 1128221000.0 1301828.0 1415170.0 1320212.0 1262394.0 1648798.0 1202821.0 1199279.0 1233857.0 1468167.0 985381.0 False True 1229613.0057102216 1347183.1089865225 1405314.9779338867 1382371.546207403 1778549.0222226616 1195313.7479752044 1320513.8251551196 1229577.0380513878 1201584.8822782256 976651.2909548164 1.259009246286972 1.3793900867826205 1.438911708763514 1.4154197706081328 1.8210686236679987 1.2238899994762862 1.3520832229322386 1.258972418752757 1.2303110571875704 1.0 19.897484020652062 -7.797408659958183 0.8313064540029735 1.0118558695449729 1.4382420289444025 0.43433261513072585 0.15094551700542042 0.569895757386442 0.8698831871548686 0.148082380981691 0.05582154565533314 1.5943781722291113e-08 7.797408659958183 0.4263861593994296 EMISLLS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 2 EMISLLSPQK 10 0 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 EMISLLS(1)PQK;EMIS(0.008)LLS(0.992)PQK 166.45 5.7523000000000005e-05 581350000.0 1017290.0 1042540.0 733300.0 713320.0 809490.0 1114300.0 804310.0 932590.0 1067590.0 1050980.0 True False 960858.8957826626 992454.813515557 780569.6913214843 781113.7183325224 873192.2576319381 1107345.2403714026 885617.5041091475 929355.0629581426 873742.5677538133 1041669.1348500674 0.9224223543121144 0.9527543634653299 0.7493451281282665 0.7498673928213798 0.8382625811003039 1.063048911908855 0.8501907894550593 0.8921787464614752 0.838790877565529 1.0 19.990465676776207 EMISLLS(ph)PQKK ddPTM_KYSE-520_SHP099_60min_R1 2 EMISLLSPQKK 11 1 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 EMISLLS(1)PQKK;EMISLLS(1)PQKK 152.0 3.1976999999999996e-05 2120670000.0 1668470.0 1525960.0 1302610.0 1242550.0 1316220.0 1576960.0 1333630.0 1408610.0 1685320.0 1523300.0 True False 1575916.6430875158 1452650.5910873436 1386578.324849691 1360641.5784137195 1419799.0257326316 1567117.607696389 1468446.3353745213 1403723.8606820442 1379308.3714598815 1509804.7471094665 1.0437883746919072 0.9621446706062191 0.9183825441695733 0.901203669559709 0.9403858535024799 1.0379604453467566 0.9726067812317281 0.9297386720829199 0.9135673828689297 1.0 20.525930556893954 -10.221216803406943 3.5138699637631157 1.0000754625799482 0.9565222888913388 0.06786547405671273 0.04677127922718891 68799033.69291747 94401918.12894902 57806.90994007018 0.012429849291053788 6.008737014644959e-11 10.221216803406943 -0.04355317368860934 EMKS(ph)PELSTVDIGFK ddPTM_KYSE-520_SHP099_60min_R1 2 EMKSPELSTVDIGFK 15 1 Q15916 Q15916 ZBTB6 Zinc finger and BTB domain-containing protein 6 1 EMKS(1)PELSTVDIGFK;EMKS(1)PELSTVDIGFK 116.29 0.00010272 412390000.0 231320.0 193946.0 175807.0 190232.0 194451.0 197894.0 171823.0 205666.0 233900.0 200468.0 True False 218488.21847501208 184628.54304111906 187139.80052114557 208311.59208466375 209753.187425154 196658.87014094784 189192.54567088062 204952.5926488051 191429.65613917026 198692.00948174394 1.0996326376933998 0.9292197684380606 0.9418587139425967 1.048414541822849 1.0556699686729294 0.9897673824624391 0.9521900058505567 1.0315089830909199 0.9634491927404814 1.0 17.600174329345183 -9.673162876817184 13.97077171706 1.0000027498177375 0.9995224396595018 0.0 0.053378407437655824 0.0 0.0 0.05141007556338742 0.012468774809931278 2.122448314516324e-10 9.673162876817184 -0.0004803101582356861 EMLAS(ph)DDEEDVSSK ddPTM_KYSE-520_SHP099_60min_R1 6 EMLASDDEEDVSSK 14 0 Q0ZGT2-4;Q0ZGT2-2;Q0ZGT2;E7ETM8;E7EUA0;Q0ZGT2-3 Q0ZGT2-4 NEXN Nexilin 1 EMLAS(1)DDEEDVSSK;EMLAS(1)DDEEDVSSK;EMLAS(1)DDEEDVSSK;EMLAS(1)DDEEDVSSK;EMLAS(1)DDEEDVSSK;EMLAS(1)DDEEDVSSK 278.33 1.7895999999999998e-25 7502370000.0 12431430.0 10761560.0 9785360.0 11155880.0 11137250.0 11508900.0 11518430.0 11910800.0 12355430.0 11482900.0 True False 11741833.796458686 10244558.504169116 10416139.962729575 12216131.481062388 12013688.212715771 11437068.686090313 12682825.313443726 11869484.21480163 10111995.367043994 11381170.439561028 1.0316894785833264 0.9001322454990182 0.9152081517488746 1.0733633720657614 1.0555758106350914 1.0049114673069988 1.114369157442554 1.0429054092313055 0.8884846616385453 1.0 23.440145596242694 -5.2562630897991385 24.997016530814875 1.031524645298855 0.9441221853931019 0.22289787736972266 0.0647482390338483 584.5970898139814 2823093.846579652 0.01783349609839508 0.029688482967630842 5.5428982985249e-06 5.2562630897991385 -0.08740245990575302 EMLAS(ph)DDEEDVSSKVEK ddPTM_KYSE-520_SHP099_60min_R1 13 EMLASDDEEDVSSKVEK 17 1 Q0ZGT2-4;Q0ZGT2-2;Q0ZGT2;E7ETM8;E7EUA0;Q0ZGT2-3 Q0ZGT2-4 NEXN Nexilin 1 EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK;EMLAS(1)DDEEDVSSKVEK 217.82 2.8403e-18 17883290000.0 15156880.0 15953080.0 15456440.0 11830160.0 13837990.0 13092720.0 10635140.0 11288860.0 19059880.0 12377090.0 True False 14316097.651908822 15186670.090738738 16452786.853578411 12954494.849532695 14926961.085607205 13011003.477982124 11710243.740164066 11249701.57949973 15599086.252474762 12267438.611830296 1.1669997384867996 1.2379658518195669 1.3411753972595313 1.0560064948717025 1.21679525432572 1.060612886657102 0.9545793633620558 0.917037528001233 1.2715846189302744 1.0 23.5483307161655 -6.017553379887659 1.3480877174843906 1.0281954735082677 1.2297929545660877 0.3398848381964258 0.11137681631825708 0.4682387587306939 1.7559873935245571 0.047570712072468685 0.05284714233630126 9.603877682064957e-07 6.017553379887659 0.20159748105782005 EMLMEDVGS(ph)EEEQEEEDEAPFQEK ddPTM_KYSE-520_SHP099_60min_R1 5 EMLMEDVGSEEEQEEEDEAPFQEK 24 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 EMLMEDVGS(1)EEEQEEEDEAPFQEK;EMLMEDVGS(1)EEEQEEEDEAPFQEK;EMLMEDVGS(1)EEEQEEEDEAPFQEK;EMLMEDVGS(1)EEEQEEEDEAPFQEK;EMLMEDVGS(1)EEEQEEEDEAPFQEK 141.98 7.825399999999999e-07 538024000.0 1142390.0 1156000.0 883765.0 933390.0 1053550.0 1053680.0 1060950.0 1210760.0 1311700.0 1040820.0 True False 1079019.3494019946 1100464.0248086255 940733.9059739958 1022099.1049660635 1136458.3911204939 1047103.5922772494 1168201.1798741787 1206560.1561535078 1073528.3452661382 1031599.144545706 1.0459676659359498 1.0667554646851187 0.9119180749110399 0.9907909582613835 1.1016472794972756 1.0150295275190164 1.1324177477760795 1.1696017416579487 1.0406448579781413 1.0 19.97645105120859 -5.75896360334146 24.994441689378828 1.0847536282455459 1.001783562581215 0.24342468029795084 0.0617388926429538 87.95084859816382 887907.0718749191 0.019173225647644548 0.02360008774109268 1.7419528540780442e-06 5.75896360334146 -0.08297006566433085 EMLQQSK ddPTM_KYSE-520_SHP099_60min_R1 2 EMLQQSK 7 0 P08238;Q58FF7;P07900;P07900-2 P08238;P07900 HSP90AB1;HSP90AB3P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha 0 ; 89.698 0.057078 3603100000.0 2603500.0 3174200.0 2294520.0 1879240.0 2911500.0 2909000.0 2394600.0 2690800.0 2777600.0 2814200.0 False True 2459078.665051423 3021706.6674286625 2442428.430561806 2057842.4045858928 3140618.485831061 2890843.8519612406 2636669.5370438783 2681466.2428374407 2273257.8575979485 2789268.3774144705 0.8816213903844137 1.083333067515594 0.8756519990470871 0.737771388816096 1.1259649703347214 1.0364165296424168 0.9452907287064127 0.9613511071756539 0.8150014806768644 1.0 21.411455323388214 -3.970528498331801 17.847500951497782 0.952639615229213 0.6431953645757847 0.03505675148005294 0.11293964526024362 1613590.6570999664 24697156.58714682 0.0287048367744333 15410792.258028517 0.00010702161532008832 3.970528498331801 -0.3094442506534283 EMLWGSSTQLASDGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 EMLWGSSTQLASDGSPK 17 0 A0A0J9YW64;A6NIW2;Q5JSL3 A0A0J9YW64 DOCK11 Dedicator of cytokinesis protein 11 1 EMLWGSSTQLASDGS(1)PK 259.34 1.7515999999999998e-28 0.0 166850.0 177680.0 127150.0 112670.0 148080.0 131220.0 123850.0 143660.0 171900.0 135300.0 True False 157594.4978927711 169143.9860968829 135346.29244719303 123378.1229245292 159733.0535400526 130401.00730641231 136369.96665951915 143161.67699049617 140687.293246359 134101.3472618073 1.1751895197972761 1.2613145919157809 1.0092836143022128 0.9200364160671477 1.1911368289850532 0.972406392396858 1.016917200639922 1.067563301291823 1.0491117063253206 1.0 17.032964205923527 -4.765539289757365 24.999957407563457 1.0302652180134562 1.218252081371201 0.5439772041348014 0.06954654145618017 68.34389888021174 416749.93174101674 0.01773707967269576 0.03919118684310559 1.7157764802163185e-05 4.765539289757365 0.18798686335774484 EMNPALGIDCLHK ddPTM_KYSE-520_SHP099_60min_R1 2 EMNPALGIDCLHK 13 0 B7ZAR1;E9PCA1;P48643;E7ENZ3;P48643-2 B7ZAR1 CCT5 T-complex protein 1 subunit epsilon 0 ; 165.33 4.1082e-06 195820000.0 237499.0 224936.0 160140.0 159550.0 266075.0 222497.0 170324.0 190144.0 187212.0 176730.0 False True 224324.45702748102 214129.73692418085 170462.8806330596 174713.58402954336 287013.58874033985 221108.3136919286 187542.01212205042 189484.43484394305 153219.02003046736 175164.3096938596 1.2806516202960536 1.2224507224012837 0.9731598915954006 0.9974268407468165 1.6385392049439917 1.2622908974914286 1.070663381426409 1.0817525280983964 0.8747159755218016 1.0 17.41834932544341 -7.184130278081081 2.0333586050433956 0.9612663744527878 1.220881998682489 0.28040562104279665 0.17721240379077016 0.5175853122194229 4.0596687342964035 0.1289716766743348 0.05689482479235325 6.54439828136824e-08 7.184130278081081 0.2596156242297012 EMPQDLRS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 4 EMPQDLRSPAR 11 1 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR;EMPQDLRS(1)PAR 100.56 0.0010118 2408670000.0 2705960.0 2793720.0 2766530.0 2134180.0 2541220.0 2712140.0 2180200.0 2474080.0 3301190.0 2578130.0 True False 2555855.004602476 2659505.4977407865 2944864.9504045066 2337011.825535384 2741199.5564360647 2695212.528242746 2400595.892701526 2465497.993934615 2701777.1122277365 2555289.7739547915 1.0002212002151167 1.0407843074582894 1.152458316242848 0.9145780057337367 1.0727548728039336 1.0547580770346048 0.9394613155697612 0.9648604315113715 1.0573270944712576 1.0 21.28505547369356 -6.735349852694148 24.999247793267926 0.9874838703874701 1.0403290929822742 0.12692389915321944 0.06253598931193817 449.63040865899916 430839.9688242685 0.02372167885440539 0.018368758637307248 1.839289735981477e-07 6.735349852694148 0.052845222594804064 EMPSVFQNVLGSAVLS(ph)PAHK ddPTM_KYSE-520_SHP099_60min_R1 2 EMPSVFQNVLGSAVLSPAHK 20 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 EMPSVFQNVLGSAVLS(1)PAHK;EMPSVFQNVLGSAVLS(1)PAHK 240.75 1.9041e-26 779970000.0 467400.0 572590.0 376300.0 415250.0 390600.0 527060.0 406740.0 548910.0 541450.0 454470.0 True False 441472.39026119944 545081.9169248884 400556.90010128776 454715.23515053466 421337.99779000983 523770.4230370202 447857.24859986105 547005.9593265571 443136.3288437528 450443.74937231024 0.9800832864844671 1.2100998574948718 0.8892495470510149 1.00948283949811 0.9353842702382728 1.1627876372285997 0.994257882863169 1.214371295170164 0.9837772850911123 1.0 18.780987430490065 -6.257195177471432 24.951251834940525 1.0796382154033566 1.0100962076974282 0.08744228287808198 0.10439185835262803 910.2856701010171 5351489.973385108 0.03392040721469862 0.03272849256540678 5.531014825012644e-07 6.257195177471432 -0.06954200770592833 EMQPTHPIR ddPTM_KYSE-520_SHP099_60min_R1 10 EMQPTHPIR 9 0 P31946-2;P31946;P27348;P63104;E7EX29;B0AZS6;B7Z2E6;H0YB80;P63104-2 P31946-2;P27348;P63104 YWHAB;YWHAQ;YWHAZ 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein theta;14-3-3 protein zeta/delta 0 ;;;;;;;;; 145.89 0.00057052 7877950000.0 4430668.0 3646592.0 2699163.0 2327585.0 3702322.0 3323352.0 2542532.0 2827165.0 2695757.0 2803931.0 False True 4184890.01372232 3471404.2466738177 2873155.3657934996 2548797.978586055 3993673.678069388 3302609.7274331693 2799555.94728107 2817358.224480273 2206275.48330381 2779090.3527653096 1.5058488507069163 1.249115288108437 1.033847410874782 0.9171339017638975 1.4370434822658853 1.1883779612083991 1.007364134273431 1.01376992715508 0.7938840423480564 1.0 21.406181308996672 -1.0000003827815747 0.8168014140002666 1.050908707695718 133.2138336519571 0.4283265593583252 0.16282395176773426 597.5686460759011 1.9168129058651526 0.06151082881324442 146367.11171431476 0.09999991186132408 1.0000003827815747 132.16292494426136 EMRLLTFR ddPTM_KYSE-520_SHP099_60min_R1 1 EMRLLTFR 8 1 A0A1W2PQL4 A0A1W2PQL4 0 67.032 0.041786000000000004 3000500000.0 871430.0 780540.0 564750.0 531070.0 780580.0 700510.0 637030.0 729890.0 673120.0 600160.0 False True 823090.0407473623 743041.6867855748 601154.6886319488 581542.733127982 842007.2051073358 696137.8572490092 701427.2092136734 727358.1819476067 550898.3759743408 594843.0493174142 1.38370960489807 1.2491390588462274 1.0106105960585354 0.9776406293984702 1.4155115472451834 1.1702882937740156 1.1791803065002864 1.2227732723484865 0.9261239189169309 1.0 19.182149534721095 -6.285833123039028 0.02559032116983279 5.53607254692538e-06 2.3239415148013505 0.21235026657277623 0.14396587999245566 707.2677920511203 7.3100248534231875 308.7405386712732 353.1275895224045 5.178057597653703e-07 6.285833123039028 2.3239359787288034 EMS(ph)PS(ph)PPAAQDPGGTALVSAR ddPTM_KYSE-520_SHP099_60min_R1 1 EMSPSPPAAQDPGGTALVSAR 21 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 2 EMS(0.999)PS(0.963)PPAAQDPGGT(0.036)ALVS(0.003)AR 57.806000000000004 0.014901 0.0 128740.0 136950.0 145600.0 110880.0 141050.0 143850.0 115220.0 125490.0 125390.0 126750.0 True False 121598.5355631725 130370.71643385898 154985.60896823672 121418.00186271238 152149.83253528122 142952.17879155188 126867.56203883582 125054.70447958606 102622.33682467103 125627.09361000788 0.9679324106681836 1.0377595523986014 1.233695730073708 0.966495350434819 1.2111227615247515 1.1379088274964584 1.0098742109936794 0.9954437445460712 0.8168806097134431 1.0 16.938788113837692 -7.221420668694563 2.1846678536758977 0.9155336612978159 1.0941865612614516 0.344969084689594 0.09617585112963899 0.35342646609977274 3.2095134491039574 0.06339305658005769 0.027594555369319762 6.005917072223212e-08 7.221420668694563 0.17865289996363576 EMTDATNEEETEIKEDTKVPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 EMTDATNEEETEIKEDTKVPSPK 23 2 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 EMTDATNEEETEIKEDTKVPS(1)PK;EMTDATNEEET(0.001)EIKEDT(0.014)KVPS(0.985)PK;EMTDATNEEETEIKEDT(0.006)KVPS(0.994)PK;EMTDATNEEETEIKEDT(0.108)KVPS(0.892)PK 132.6 1.0667e-05 2201330000.0 2595200.0 2363180.0 2132880.0 2079960.0 2285340.0 2241950.0 1982360.0 2336790.0 2751040.0 2147010.0 True False 2451239.0825970587 2249649.2855945025 2270368.8575286623 2277638.773037224 2465183.2561941114 2227957.1584408707 2182756.2947691954 2328684.220900887 2251520.484074833 2127989.161748506 1.1519039319650235 1.0571714020131717 1.0669080925502303 1.070324423628998 1.1584566784957413 1.0469776813196847 1.0257365657707056 1.0943120682943122 1.0580507290858685 1.0 21.021059372263135 -13.99999999981922 0.09772785366876968 0.7402516935841019 1.137220332643105 0.35145814345691984 0.03840390230087464 242.34244562363648 1.616528226749136 12.82955761986424 0.7208826527781961 1.0000000004162609e-14 13.99999999981922 0.39696863905900304 EMTLDEWK ddPTM_KYSE-520_SHP099_60min_R1 5 EMTLDEWK 8 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 ;;;; 171.38 0.00090354 3926790000.0 4870140.0 5962840.0 3786040.0 3583350.0 5612450.0 5551880.0 4294610.0 4635280.0 4663030.0 5117520.0 False True 4599983.625816601 5676376.215994691 4030094.196278185 3923910.5066265357 6054117.884527752 5517228.657554686 4728751.090154522 4619201.295562483 3816341.297420414 5072182.754170312 0.906904157196333 1.1191190245122016 0.7945483022993742 0.7736137865695641 1.1935922221158337 1.0877424818769514 0.9322911494595847 0.9106929934187821 0.7524061104231007 1.0 22.274175297014676 -7.240748726865445 3.2049850718807966 0.8690169938732311 0.9785559764530308 0.07561122510398355 0.1384501193368834 0.6594736899572873 13.909803222923577 0.08428769361612659 0.04051225093348791 5.7444872934390964e-08 7.240748726865445 0.10953898257979977 EMVELPLR ddPTM_KYSE-520_SHP099_60min_R1 1 EMVELPLR 8 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 87.181 0.059309 0.0 91840.0 112730.0 90308.0 73154.0 98505.0 103830.0 75862.0 103410.0 99025.0 106030.0 False True 86745.45212149888 107314.28158882022 96129.39817790888 80106.53416544793 106256.78308321776 103181.95845621702 83530.87130177184 103051.2948460755 81044.55621710717 105090.65669009183 0.8254344853635064 1.021159111273667 0.9147283041668552 0.7622612389004183 1.0110963850627064 0.981837602942158 0.7948458400835867 0.9805942611051492 0.7711870757083985 1.0 16.681274883545978 -10.18479253081549 4.370802230681784 1.0000240865473011 0.901645754627302 0.09250678865828454 0.0963117462656573 125951118.1536396 2.0384269885897175 34091.71934744841 0.022346808001070362 6.534426377423263e-11 10.18479253081549 -0.09837833191999912 EMVELPLRHPALFK ddPTM_KYSE-520_SHP099_60min_R1 2 EMVELPLRHPALFK 14 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 121.24 9.5661e-05 541290000.0 578930.0 578580.0 471130.0 315040.0 578770.0 502490.0 296990.0 315490.0 461330.0 284970.0 False True 546815.5988316565 550784.1483337141 501499.7936346527 344981.30687977024 624315.9062491652 499353.7735207988 327012.64754308155 314395.63882591954 377564.10118291393 282445.38750330504 1.9360047040076303 1.950055383103996 1.7755637578920789 1.2214088887386536 2.2103951201605647 1.767965757681051 1.1577907164062113 1.1131201029871327 1.3367685148637658 1.0 18.10761241525724 -6.751533846004481 6.5917039907025385 1.1591480780733123 1.8084110118558872 0.6330631807865692 0.2456170127242528 0.10145906936975471 19.095591449384592 0.10012771726944317 0.07329477668213785 1.772009941161865e-07 6.751533846004481 0.6492629337825748 EMWTEVPK ddPTM_KYSE-520_SHP099_60min_R1 1 EMWTEVPK 8 0 P62316;K7EJB5;P62316-2 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 0 119.27 0.012052 0.0 292140.0 292600.0 183900.0 161310.0 260520.0 285860.0 212080.0 219990.0 266420.0 264200.0 False True 275934.4118333481 278543.0567984458 195754.48825040334 176640.8539003799 281021.4418439666 284075.841705617 233519.11610133896 219226.90603605186 218044.84390165794 261859.39354448993 1.0537502897961415 1.0637122962370313 0.7475557229423762 0.6745637477785139 1.0731768604521 1.0848411350091685 0.891772920346522 0.8371932091823362 0.8326790990776969 1.0 17.998432833193817 -6.981750929479244 24.932751308705505 0.8738582208278824 0.9428509411916063 0.03670929324491079 0.13896842269260393 901.5956893624723 1231800.4956648338 0.06422218976913173 0.04329008574249671 1.0429153762107244e-07 6.981750929479244 0.06899272036372384 ENARS(ph)PSSVTGNALWK ddPTM_KYSE-520_SHP099_60min_R1 1 ENARSPSSVTGNALWK 16 1 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 ENARS(0.852)PS(0.073)S(0.073)VT(0.002)GNALWK 64.249 0.018288 656700000.0 287900.0 380800.0 291410.0 253510.0 281450.0 235590.0 163990.0 260580.0 409130.0 250430.0 True False 271929.6130855789 362505.7964075469 310194.75487248524 277603.51417943893 303598.51376855624 234119.59542232665 180567.70958816752 259676.1087998292 334842.3053279979 248211.38503159193 1.095556567846266 1.4604720744836412 1.2497200917395637 1.1184157170876994 1.223144996873994 0.9432266589726668 0.7274755328615775 1.0461893549595964 1.3490207360366637 1.0 17.921209765376137 -5.886388794436484 1.7473644742564542 1.005316325708253 1.2687966888053008 0.2629849581907183 0.17204065581490754 0.47294306072347037 2.9679158684649165 0.06685716396285386 0.08046600269690297 1.2990061451148195e-06 5.886388794436484 0.2634803630970479 ENAS(ph)PAPGTTAEEAMSR ddPTM_KYSE-520_SHP099_60min_R1 7 ENASPAPGTTAEEAMSR 17 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 ENAS(0.999)PAPGTTAEEAMSR;ENAS(1)PAPGTTAEEAMSR;ENAS(1)PAPGTTAEEAMSR;ENAS(1)PAPGTTAEEAMSR;ENAS(1)PAPGTTAEEAMSR;ENAS(1)PAPGTTAEEAMSR;ENAS(0.937)PAPGT(0.01)T(0.053)AEEAMSR 327.7 4.4563e-48 2741150000.0 2293650.0 2303740.0 1826080.0 1706730.0 1768790.0 2357820.0 1931280.0 2418980.0 2536510.0 2361730.0 True False 2166416.662222082 2193064.8724157624 1943792.0386313049 1868937.106052913 1907983.709961575 2343103.970791082 2126512.629876432 2410589.1229741746 2075943.724213623 2340806.9095981335 0.9254999433481719 0.9368841417134507 0.8303940109972644 0.7984157507351897 0.815096581498529 1.0009813116936428 0.9084528164869048 1.0298111788246649 0.8868496225389296 1.0 21.158574502469367 -6.264038148610684 24.99690432068607 0.9635342999251078 0.8602536211554108 0.45058098483981557 0.05737870788256357 235.67530817490055 2266891.273026087 0.020614715515870748 0.019015111316004474 5.444548256000766e-07 6.264038148610684 -0.10328067876969693 ENCRPDGR ddPTM_KYSE-520_SHP099_60min_R1 1 ENCRPDGR 8 1 Q96B26 Q96B26 EXOSC8 Exosome complex component RRP43 0 76.827 0.016363 56284000.0 61457.0 61111.0 42351.0 32351.0 65743.0 64793.0 47125.0 51290.0 52317.0 65749.0 False True 58047.85769850784 58175.13583051888 45081.013223995884 35425.62931331717 70916.60007349866 64388.602853257005 51888.85489567897 51112.086961176006 42817.551604245295 65166.51501194801 0.8907620376487067 0.8927151593092358 0.6917818639792302 0.5436170601853119 1.088236804753122 0.988062701242373 0.7962502657410077 0.7843305254516805 0.6570483567579896 1.0 15.991843223829893 -2.9566859673837245 24.967515371669155 0.8273162121084159 0.8909807316263776 0.0 0.1620801802443431 0.0 0.0 0.038500873803945 0.0 0.0011048772533072645 2.9566859673837245 0.0636645195179617 ENDLYVLPPLQEEEKHS(ph)S(ph)EEEDEKEWQER ddPTM_KYSE-520_SHP099_60min_R1 1 ENDLYVLPPLQEEEKHSSEEEDEKEWQER 29 2 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;P28715-3 A0A494C0S2 BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 2 ENDLYVLPPLQEEEKHS(1)S(1)EEEDEKEWQER 96.492 0.0017925999999999999 286880000.0 89573.0 85670.0 80600.0 85630.0 70246.0 97136.0 75566.0 75007.0 117920.0 75122.0 True False 84604.20713065131 81554.28460670843 85795.60496455962 93768.24945440167 75773.9605549334 96529.73819323041 83204.94873309026 74746.81822376548 96508.70052129528 74456.47752403162 1.1362907559432207 1.0953282685228551 1.1522920210248755 1.2593699376140506 1.0176946731125782 1.2964585675178417 1.1174977852831538 1.003899468647844 1.2961760175955956 1.0 16.18410974461319 -10.349860352092346 4.532310507861997 0.9998314667873786 1.1490459766916625 0.17576418214555245 0.09895649750598018 0.00015904917799579958 2.2814951153854387e-05 0.09042956789401116 0.021907687954658223 4.468272468867035e-11 10.349860352092346 0.14921450990428398 ENEEDLKDKLDFAPPT(ph)PPHYPPHER ddPTM_KYSE-520_SHP099_60min_R1 1 ENEEDLKDKLDFAPPTPPHYPPHER 25 2 H7C3B1;H0Y650;Q86Y56-2;Q86Y56 H7C3B1 DNAAF5 Dynein assembly factor 5, axonemal 1 ENEEDLKDKLDFAPPT(1)PPHYPPHER 107.52 0.0016659000000000003 1139700000.0 905540.0 711370.0 809160.0 853630.0 802120.0 809840.0 886170.0 843310.0 1037000.0 738350.0 True False 855307.891050763 677194.7174118614 861319.7483017746 934758.7385467824 865242.2805615002 804785.4881651058 975752.7117857587 840384.7544400336 848706.9406426663 731808.7934276068 1.1687586958947538 0.9253711126372957 1.1769737615034268 1.2773264641554927 1.1823338122365608 1.0997209864009623 1.3333437921886404 1.148366570595421 1.159738647943185 1.0 19.48110722566749 -4.897706692421075 11.706666774671387 1.185394283934753 1.0472308842688816 0.1863093317568778 0.1018382983883701 0.561140464836619 60.406442654750315 0.025077875592752263 0.05225357190430815 1.2655907954677304e-05 4.897706692421075 -0.13816339966587154 ENELPDFPHIDEFFTLNST(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 ENELPDFPHIDEFFTLNSTPSR 22 0 A0A087WZP0;E9PLV2;Q8NCY6 A0A087WZP0 MSANTD4 Myb/SANT-like DNA-binding domain-containing protein 4 1 ENELPDFPHIDEFFT(0.069)LNS(0.073)T(0.562)PS(0.296)R 94.588 0.0028756999999999997 41751000.0 31022.0 36595.0 27800.0 22195.0 23842.0 28887.0 25869.0 28930.0 40267.0 29071.0 True False 29301.147819176163 34836.92126978513 29592.03248157269 24304.40612682992 25718.22975757656 28706.705517911414 28484.09097711024 28829.648582312762 32955.52784846505 28813.453556895744 1.0169259218204234 1.2090505291562952 1.0270213677489075 0.8435089559409409 0.892577132650646 0.996295201518501 0.9885691390955571 1.0005620647099813 1.1437548707373888 1.0 14.814454970654662 -4.990982570544477 24.68863403387941 0.9747821515216224 1.1142502252753643 0.271614450184417 0.08541349463828482 211.3798415483522 578720.3693446947 0.02310294500329584 0.0479831499956139 1.020980457694546e-05 4.990982570544477 0.13946807375374193 ENFQNWLK ddPTM_KYSE-520_SHP099_60min_R1 4 ENFQNWLK 8 0 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 ;;; 163.99 0.0014320000000000001 6717850000.0 2778960.0 2809510.0 1861870.0 1665920.0 2635680.0 2809130.0 2126810.0 2157460.0 2141650.0 2161350.0 False True 2624805.5490805823 2674536.922439517 1981889.1192973277 1824248.53592289 2843093.0210321867 2791597.177676136 2341808.710465336 2149976.2748149475 1752780.3466030548 2142202.120504855 1.225283797432705 1.248498867982264 0.9251643905712565 0.8515762907997529 1.3271824324224606 1.30314369076352 1.093178224430774 1.0036290479949017 0.8182142711118104 1.0 21.030663176626714 -7.372102960454972 3.0066431577578494 0.9107807653604034 1.1387618807271123 0.27733028949358496 0.15147033233374949 0.39711659887064504 6.765273042696045 0.11074201437588625 0.04552354403144536 4.245189091063902e-08 7.372102960454972 0.22798111536670884 ENFTAGS(ph)DCVTLK ddPTM_KYSE-520_SHP099_60min_R1 1 ENFTAGSDCVTLK 13 0 Q1W6H9 Q1W6H9 FAM110C Protein FAM110C 1 ENFT(0.002)AGS(0.998)DCVTLK 147.7 7.6835e-06 384210000.0 316950.0 354930.0 301940.0 277800.0 339630.0 319850.0 304550.0 327890.0 373670.0 311770.0 True False 299368.15167583915 337878.63003920834 321403.53552108136 304202.0284763844 366356.9487696388 317853.6975076665 335336.8861215709 326752.62612010096 305820.94745414215 309007.9603533897 0.9688040118237531 1.0934301810633014 1.040114096586754 0.9844472230698876 1.1855906506442853 1.0286262436222051 1.0852046844944407 1.0574246234511824 0.9896863080950964 1.0 18.237284478308965 -7.75802496999679 24.168709433170633 0.9948431263623414 1.0582779502305635 0.15022954336873862 0.0573488258281855 95.9029734729147 678908.0952066863 0.04097245060994179 0.01402583100758085 1.7457217788144797e-08 7.75802496999679 0.06343482386822208 ENGEEGCHQNGLALPVVEEGEVLS(ph)HSLEAEHR ddPTM_KYSE-520_SHP099_60min_R1 1 ENGEEGCHQNGLALPVVEEGEVLSHSLEAEHR 32 0 Q9HC44 Q9HC44 GPBP1L1 Vasculin-like protein 1 1 ENGEEGCHQNGLALPVVEEGEVLS(0.579)HS(0.421)LEAEHR 124.7 6.676e-05 220400000.0 96036.0 88754.0 84746.0 84741.0 77408.0 86508.0 74880.0 85757.0 106910.0 79604.0 True False 90708.69163698037 84490.12461752993 90208.86275839419 92794.75916168926 83499.5692087277 85968.07148348674 82449.60115837553 85459.52898283419 87497.83898178162 78898.77049097492 1.1496844763551337 1.0708674430762466 1.1433494108594888 1.1761242739809727 1.0583126795148101 1.0895996344242205 1.045004892285448 1.0831541283981068 1.1089886247567107 1.0 16.267715197907396 -5.783312802532804 24.980892228552637 1.068646911329821 1.1310209880118507 0.4619884993047898 0.03715931586784473 238.74919638568548 272666.2512343282 0.011418160973291786 0.012958221046242467 1.6469757226332711e-06 5.783312802532804 0.062374076682029767 ENGEEGCHQNGLALPVVEEGEVLSHS(ph)LEAEHR ddPTM_KYSE-520_SHP099_60min_R1 1 ENGEEGCHQNGLALPVVEEGEVLSHSLEAEHR 32 0 Q9HC44 Q9HC44 GPBP1L1 Vasculin-like protein 1 1 ENGEEGCHQNGLALPVVEEGEVLS(0.144)HS(0.856)LEAEHR 302.96 4.776e-54 377010000.0 134540.0 134760.0 145710.0 124910.0 138510.0 117280.0 129990.0 146780.0 169730.0 118740.0 True False 127076.79800115927 128285.92732111609 155102.69974424306 136781.40884443917 149409.9489859041 116548.01201719278 143130.6577801447 146270.85443870947 138911.31054511078 117688.05597832215 1.0797765070107581 1.0900505259832487 1.317913686778993 1.162236963703725 1.2695421616397933 0.9903130020149252 1.2161867794511707 1.2428691528871223 1.1803348214936773 1.0 16.844608384828295 -9.050321201273276 14.276052984107418 1.0000000000009064 1.1746112668839375 0.23583589610764255 0.09286065046398835 0.0 0.0 0.08968277915938896 0.021751268898417823 8.905920186398848e-10 9.050321201273276 0.17461126688303108 ENGFS(ph)SPPQIK ddPTM_KYSE-520_SHP099_60min_R1 1 ENGFSSPPQIK 11 0 P11387 P11387 TOP1 DNA topoisomerase 1 1 ENGFS(0.5)S(0.5)PPQIK 75.102 0.017359 486670000.0 886970.0 854280.0 725870.0 702700.0 670050.0 896200.0 832970.0 925360.0 902150.0 874680.0 True False 837768.0059691414 813239.106499577 772660.7416330627 769484.3967255403 722779.1229370087 890606.4833714892 917174.7366037918 922150.1421406479 738342.3013508014 866931.0156907437 0.9663606340138078 0.9380666878685998 0.8912597745939804 0.8875958787936997 0.8337216108955576 1.0273095174266913 1.0579558465479695 1.0636949485604772 0.8516736487533707 1.0 19.72555767286611 -6.280193809386223 24.55226502451812 1.0077220504761595 0.9037742242831365 0.36111519164394434 0.06392930415265416 719.1826140480601 941511.0685012653 0.0230015253782904 0.02032175095424966 5.245733105561854e-07 6.280193809386223 -0.10394782619302301 ENGFS(ph)SPPQIKDEPEDDGYFVPPKEDIKPLK ddPTM_KYSE-520_SHP099_60min_R1 1 ENGFSSPPQIKDEPEDDGYFVPPKEDIKPLK 31 3 P11387 P11387 TOP1 DNA topoisomerase 1 1 ENGFS(0.5)S(0.5)PPQIKDEPEDDGYFVPPKEDIKPLK 240.87 2.9634e-31 341380000.0 207550.0 192070.0 199290.0 182890.0 157690.0 152860.0 192670.0 203450.0 217050.0 185990.0 True False 196036.7877593326 182842.66889705238 212136.55227527412 200271.8106121166 170099.30586663244 151905.9440394622 212146.9638779942 202744.2794355871 177639.19138523683 184342.27329803052 1.0634391355388966 0.9918651084520712 1.1507753944875572 1.086412828859566 0.9227362927852629 0.8240429138783173 1.1508318742224208 1.0998252099658423 0.9636378471803011 1.0 17.492027421607737 -5.7210540122533065 24.997569898748903 0.997895968708728 1.0728656364119464 0.15274077476439563 0.09150644451503577 354.131192092919 219196.92013649666 0.029382754327089738 0.03793251256343689 1.9008418616840274e-06 5.7210540122533065 0.07496966770321845 ENGFSS(ph)PPQIK ddPTM_KYSE-520_SHP099_60min_R1 2 ENGFSSPPQIK 11 0 P11387 P11387 TOP1 DNA topoisomerase 1 1 ENGFS(0.134)S(0.866)PPQIK;ENGFS(0.102)S(0.898)PPQIK 97.71600000000001 0.0030997 0.0 1072200.0 1113910.0 888750.0 880880.0 857220.0 1030010.0 1063660.0 1198740.0 1158740.0 1164040.0 True False 1012722.9286222897 1060396.0915870024 946040.2470502771 964598.5703537717 924678.3370853853 1023581.3255271894 1171185.133121228 1194581.8507280196 948342.0254583247 1153727.5112094155 0.8777834616777793 0.9191044516875767 0.8199858613569624 0.8360713955261533 0.8014703022172668 0.8871950400612376 1.015131494865293 1.0354107353093953 0.8219809411185907 1.0 20.137871096039984 -6.595117310497382 5.695168552393854 0.9701999446222288 0.8513557181237225 0.4455784561000967 0.061796027462556705 0.19264710649869923 11.115197145606045 0.024087940787537464 0.018567410440547223 2.540286437292873e-07 6.595117310497382 -0.11884422649850634 ENGFSS(ph)PPQIKDEPEDDGYFVPPKEDIKPLK ddPTM_KYSE-520_SHP099_60min_R1 1 ENGFSSPPQIKDEPEDDGYFVPPKEDIKPLK 31 3 P11387 P11387 TOP1 DNA topoisomerase 1 1 ENGFS(0.167)S(0.833)PPQIKDEPEDDGYFVPPKEDIKPLK 162.69 3.4512e-10 259890000.0 109930.0 121960.0 125670.0 126420.0 111000.0 130030.0 123070.0 99834.0 137450.0 137970.0 True False 103831.96375997805 116100.8585343079 133770.8892791095 138434.9187904409 119735.06849639279 129218.43453782058 135511.11664745284 99487.69915543076 112492.54483253096 136747.6931390358 0.7592959074959219 0.8490151158620599 0.9782314144275934 1.0123382384936441 0.8755911397690217 0.944940507379821 0.9909572405705909 0.7275274402931127 0.8226284645120568 1.0 17.061156970160717 -9.619929161340528 11.621912414935224 0.999997351967511 0.8900052206825679 0.1202128695880792 0.0926660455228024 0.0 0.0 0.09578014297276993 0.023230096841970096 2.3992242294665263e-10 9.619929161340528 -0.10999213128494312 ENGVYLIDVK ddPTM_KYSE-520_SHP099_60min_R1 1 ENGVYLIDVK 10 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 97.911 0.019497 0.0 52697.0 65516.0 41014.0 37544.0 49293.0 50266.0 43061.0 48156.0 49013.0 51565.0 False True 49773.792361134925 62368.51301847909 43657.82806472021 41112.1704719848 53172.07866119544 49952.271248774035 47414.026114861175 47988.95807569487 40113.4747171832 51108.17421696297 0.973891028660829 1.220323636561816 0.8542239814591153 0.8044147751679913 1.0403830595761616 0.977383207561242 0.9277190359722203 0.9389683511677311 0.7848739527828682 1.0 15.641266433122322 -4.773585035489447 24.99982046935779 0.9168845482970528 1.0971073679122296 0.3662767785971822 0.09528505189828924 203.58550006709493 419048.98682803696 0.024716585338835584 0.052063845640387685 1.684282609507971e-05 4.773585035489447 0.18022281961517683 ENHGQADHS(ph)PSMTATHFPR ddPTM_KYSE-520_SHP099_60min_R1 7 ENHGQADHSPSMTATHFPR 19 0 Q9Y3L3;Q6ZT62-2;Q6ZT62;Q9Y3L3-2 Q9Y3L3 SH3BP1 SH3 domain-binding protein 1 1 ENHGQADHS(0.998)PS(0.002)MTATHFPR;ENHGQADHS(0.999)PS(0.001)MTATHFPR;ENHGQADHS(0.976)PS(0.024)MTATHFPR;ENHGQADHS(1)PSMTATHFPR;ENHGQADHS(0.96)PS(0.04)MTATHFPR;ENHGQADHS(0.944)PS(0.056)MTATHFPR;ENHGQADHS(0.978)PS(0.022)MTATHFPR 332.67 2.0074e-64 10506140000.0 1688919.0 1690948.0 1644487.0 1928200.0 1448710.0 1456634.0 1354546.0 1563033.0 1774557.0 1431650.0 True False 1595231.2962934438 1609712.3199153065 1750493.2632922323 2111455.54826553 1562715.23496765 1447542.6068950528 1491476.72877501 1557611.2033376459 1452342.1817415892 1418966.6948068456 1.1242203937074027 1.1344257238781956 1.2336394290991552 1.48802333133897 1.1013050839649001 1.020138536156479 1.0511005890649425 1.0977080780248143 1.023520979778378 1.0 20.436409296988398 -5.983219729826861 24.982523511597513 1.0470919995345036 1.243645038705234 0.5083465918593005 0.0959634104602608 218.97759293661946 326012.87361691473 0.03166350584412851 0.03589451881179715 1.0393941548100893e-06 5.983219729826861 0.19655303917073041 ENIEKDEDDVDQELANIDPTWIES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 ENIEKDEDDVDQELANIDPTWIESPK 26 1 P78362;P78362-2 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 ENIEKDEDDVDQELANIDPT(0.034)WIES(0.966)PK;ENIEKDEDDVDQELANIDPT(0.003)WIES(0.997)PK;ENIEKDEDDVDQELANIDPT(0.001)WIES(0.999)PK 151.38 4.981100000000001e-07 508876000.0 624374.0 522105.0 418576.0 503249.0 529712.0 626005.0 570229.0 743744.0 655490.0 668189.0 True False 589738.7295612885 497022.2921044172 445558.0787052791 551077.6336526714 571397.3207510024 622097.8705902351 627873.3122187397 741164.1256551549 536469.5395582078 662269.3653031765 0.8904816687260106 0.7504835919397966 0.672774707767601 0.8321049749906471 0.8627868820256026 0.9393426650581196 0.9480633487120594 1.1191279024598424 0.8100473427645571 1.0 19.337058599242937 -6.050405400876354 1.5702074095603726 0.97690772029678 0.7708301307246253 0.4841324609955501 0.08707685096307784 0.3117578342102333 1.5563416484889414 0.03470595031809126 0.03707996748635843 8.904193702897391e-07 6.050405400876354 -0.20607758957215472 ENIKPNET(ph)SPSFSK ddPTM_KYSE-520_SHP099_60min_R1 5 ENIKPNETSPSFSK 14 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 ENIKPNET(0.559)S(0.361)PS(0.078)FS(0.002)K;ENIKPNET(0.643)S(0.35)PS(0.006)FSK;ENIKPNET(0.49)S(0.49)PS(0.02)FS(0.001)K;ENIKPNET(0.499)S(0.499)PS(0.001)FS(0.001)K;ENIKPNET(0.888)S(0.086)PS(0.025)FS(0.002)K 138.19 2.1266e-05 12454700000.0 7740090.0 6192670.0 5821140.0 6225570.0 6315500.0 6561010.0 6579910.0 7430770.0 7657370.0 6772930.0 True False 7310731.778213114 5895164.837812831 6196379.99855331 6817246.301014132 6812493.919720444 6520060.302906906 7245071.516533208 7404994.393224755 6266984.6345891375 6712927.109459801 1.0890527573151945 0.8781809695960222 0.9230518814693255 1.0155400453264756 1.0148321006078458 0.9712693429545648 1.079271590231259 1.1030947115141023 0.9335695937704664 1.0 22.67851054670106 -5.358073480243215 6.665746595063907 1.0221679102389378 0.955134962297578 0.10909560901823467 0.06760266425235832 0.4430883729414733 25.935609505432435 0.019020837432792113 0.0283456230958383 4.384565070637983e-06 5.358073480243215 -0.06703294794135983 ENIKPNETS(ph)PSFSK ddPTM_KYSE-520_SHP099_60min_R1 3 ENIKPNETSPSFSK 14 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 ENIKPNET(0.049)S(0.778)PS(0.172)FS(0.002)K;ENIKPNET(0.11)S(0.851)PS(0.039)FSK;ENIKPNET(0.054)S(0.945)PS(0.002)FSK 182.09 3.3521999999999997e-09 13989700000.0 8627920.0 7280280.0 6743820.0 7428300.0 7559610.0 7868410.0 7496230.0 8708700.0 8428190.0 7605440.0 True False 8149312.078267887 6930524.42087694 7178537.427693515 8134283.398600176 8154508.298702849 7819300.334551512 8254022.084554602 8678491.552325862 6897843.153380046 7538061.718542778 1.0810885321118429 0.9194040430617111 0.952305472643601 1.0790948260068978 1.0817778632196235 1.0373091421256102 1.0949793717197411 1.1512895325568582 0.9150685429401743 1.0 22.845762176567234 -5.2642044577749685 24.99954253697174 1.0601630739914718 0.9777798170916243 0.14876592438226155 0.07089816847121794 362.4494519860131 3276970.488621157 0.01909151138038731 0.029828603738795846 5.442463714387102e-06 5.2642044577749685 -0.08238325689984749 ENIKPNETSPS(ph)FSK ddPTM_KYSE-520_SHP099_60min_R1 1 ENIKPNETSPSFSK 14 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 ENIKPNET(0.22)S(0.082)PS(0.671)FS(0.027)K 116.06 0.00051901 1285000000.0 2896700.0 2188800.0 2006900.0 2324100.0 2351800.0 2264100.0 2478700.0 2369400.0 2489000.0 2302900.0 True False 2736014.2765717083 2083646.7625442168 2136267.985153535 2544981.7652338566 2536873.28008844 2249968.91207475 2729271.1857807827 2361181.1044221167 2037060.3425839907 2282498.097629087 1.198692905555411 0.9128799558293502 0.9359341799112794 1.114998416812448 1.111445955956582 0.9857484281857117 1.1957386464487199 1.0344723208640394 0.8924696781565595 1.0 21.122182227105533 -10.307554682001253 3.9502121826635954 0.9999221815532656 1.0423046872718171 0.014315602162199292 0.10575447049357302 7.220036199115429e-05 1.265616574858458e-05 0.10200470790011798 0.02469436140446915 4.9254432320868546e-11 10.307554682001253 0.04238250571855151 ENILEEFSK ddPTM_KYSE-520_SHP099_60min_R1 1 ENILEEFSK 9 0 B4DT28;O43390-4;O43390-3;O43390;O43390-2 B4DT28 HNRNPR Heterogeneous nuclear ribonucleoprotein R 0 104.79 0.013065 12380000.0 59593.0 62114.0 44971.0 43241.0 47403.0 57696.0 39917.0 49410.0 52024.0 50600.0 False True 56287.25749429974 59129.950204985194 47869.9026161441 47350.611639119306 51133.34641382444 57335.8978627555 43952.199912378106 49238.60824238067 42577.75301831637 50151.723366204336 1.1223394475060042 1.1790213024829173 0.9545016482604487 0.9441472488067556 1.019573067119795 1.143248806109669 0.8763846377011265 0.9817929462332499 0.8489788617515021 1.0 15.6140116566413 -1.0242517482939495 0.3708867500550178 0.9479821617975381 3.8255328164458042 0.33714995089461164 0.0857914694080538 74.15189896229295 1.0434031707431204 0.06937352027360814 151.73013499161502 0.09456888132484469 1.0242517482939495 2.877550654648266 ENIVNSFTDKQQT(ph)PEKLPIPMIAK ddPTM_KYSE-520_SHP099_60min_R1 1 ENIVNSFTDKQQTPEKLPIPMIAK 24 2 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 ENIVNS(0.005)FT(0.005)DKQQT(0.99)PEKLPIPMIAK 78.913 0.025876999999999997 337860000.0 133640.0 132390.0 86003.0 82081.0 97891.0 132990.0 80594.0 94459.0 139500.0 111030.0 True False 126226.72279526468 126029.78567855852 91546.89098966538 89881.95356144755 105594.46477639982 132159.96007986434 88741.22804164147 94131.3437758964 114170.31650882537 110046.36058003294 1.1470322337780932 1.145242650590897 0.8318938537098323 0.8167644353497677 0.9595452700101299 1.200948031204984 0.8063985721463548 0.8553789810017198 1.037474714357257 1.0 16.747751908081003 -4.7424474103674665 24.432269733627365 0.9344374009562757 1.1461377557752013 0.33999266296325825 0.11557740550719725 215.6844943222355 277462.03000319755 0.0307255367168063 0.08097740378996057 1.8094750101238833e-05 4.7424474103674665 0.21170035481892557 ENKEPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 ENKEPSPK 8 1 H3BV44;H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4 H3BV44 MYO9A Unconventional myosin-IXa 1 ENKEPS(1)PK;ENKEPS(1)PK 89.54799999999999 0.0029473000000000004 1220220000.0 1098190.0 773130.0 696890.0 870330.0 961770.0 1262270.0 1188140.0 759480.0 1204710.0 1450600.0 True False 1037271.211512509 735987.6743082117 741812.6444634249 953045.9015257441 1037455.8272772587 1254391.7047147162 1308248.7863289556 756845.5411439642 985965.0322677215 1437748.812549721 0.7214550987338323 0.5119028218865312 0.5159542737843653 0.6628737184178932 0.7215835048664878 0.8724693032367475 0.90992861542267 0.5264101312674814 0.6857700202298893 1.0 20.45538021551647 -5.6739044714493545 2.6424477118660343 0.7761691263976104 0.5776805330968456 0.321965513980897 0.13380705911914914 0.36168203151507283 5.130561366032833 0.04431108662306899 0.058991756387649696 2.118827146757543e-06 5.6739044714493545 -0.19848859330076474 ENLQPQSSGVQGQVPIS(ph)PEPLQRPEMLK ddPTM_KYSE-520_SHP099_60min_R1 3 ENLQPQSSGVQGQVPISPEPLQRPEMLK 28 1 Q9H467 Q9H467 CUEDC2 CUE domain-containing protein 2 1 ENLQPQSSGVQGQVPIS(1)PEPLQRPEMLK;ENLQPQSSGVQGQVPIS(1)PEPLQRPEMLK;ENLQPQSSGVQGQVPIS(1)PEPLQRPEMLK 194.67 1.2034e-15 2441610000.0 845570.0 993120.0 651911.0 703643.0 656266.0 1113120.0 967536.0 1246000.0 1057800.0 1204490.0 True False 798664.5464979952 945409.0244964891 693934.2261544802 770517.0191620174 707910.4005572402 1106172.6051891022 1065343.9811213934 1241677.916818585 865730.1849679969 1193819.1556790397 0.6689996074352802 0.7919197979016714 0.5812724840721568 0.6454218928358125 0.5929795959376976 0.9265830590228011 0.8923830515313099 1.0400887864061148 0.7251769925534265 1.0 20.187152877480212 -6.269295587735731 24.821772760526883 0.9178229851827213 0.6589107938929891 0.6590730042059197 0.09374868780139647 337.1498423584641 1065225.2630730355 0.03182629719875328 0.028576212520847792 5.379035521815355e-07 6.269295587735731 -0.2589121912897322 ENLRLS(ph)GVVTSR ddPTM_KYSE-520_SHP099_60min_R1 4 ENLRLSGVVTSR 12 1 E9PDI4;O00515 E9PDI4 LAD1 Ladinin-1 1 ENLRLS(1)GVVTSR;ENLRLS(1)GVVTSR;ENLRLS(1)GVVTSR;ENLRLS(1)GVVTSR 181.51 2.5182e-07 1759970000.0 641431.0 572477.0 513994.0 537315.0 520725.0 496557.0 561840.0 617413.0 640295.0 630840.0 True False 605849.5437690029 544974.345614504 547126.8756594773 588381.2560503552 561703.0949800382 493457.80357453343 618636.2702299897 615271.338408277 524033.568523429 625251.2483860931 0.9689697466943566 0.8716085685893455 0.8750512327192126 0.9410317173601697 0.8983638120354239 0.789215223237464 0.9894202879671523 0.9840385604929597 0.8381167888525957 1.0 19.254076507352657 -13.999999932941117 0.3034292772079353 1.7962033620100568 0.9016794666405148 0.16031589674205282 0.06255677293229005 527.4384850265596 4.8579843178810425 267.4471721743287 0.06248259416502386 1.000000154408796e-14 13.999999932941117 -0.894523895369542 ENLS(ph)PGFSHLLSK ddPTM_KYSE-520_SHP099_60min_R1 1 ENLSPGFSHLLSK 13 0 F5H1U6;A0A0A0MTP3;Q99550-2;Q99550;H0YG46;J3KNE4 F5H1U6 MPHOSPH9 M-phase phosphoprotein 9 1 ENLS(1)PGFSHLLSK 138.66 8.6376e-06 77558000.0 246520.0 255860.0 223270.0 222210.0 206330.0 250030.0 207980.0 228750.0 277510.0 240620.0 True False 232845.04417456384 243568.1015463103 237662.34144463093 243328.77159012758 222566.9971428897 248469.47002608085 229004.6480891953 227956.5196406516 227121.1794578075 238488.29399952726 0.9763374137559363 1.0213000288676353 0.9965367165782235 1.0202964997125181 0.9332407616758368 1.0418518488231265 0.9602343337222633 0.9558394494662428 0.9523368029889874 1.0 17.86355892891374 ENNS(ph)PEHLKDEVSIIQSMGYR ddPTM_KYSE-520_SHP099_60min_R1 1 ENNSPEHLKDEVSIIQSMGYR 21 1 P38398;P38398-4;P38398-8;P38398-7;E7EUM2;P38398-5;Q5YLB2;H0Y8B8;B7ZA85;P38398-3;P38398-6;A0A0U1RRA9;E7EWN5;E9PH68;Q3B891;A0A494C182;H0Y8D8;H0Y881;E7EQW4 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 ENNS(1)PEHLKDEVSIIQSMGYR 114.91 7.8777e-05 272100000.0 112050.0 118670.0 125250.0 130560.0 110260.0 138480.0 97003.0 122750.0 217610.0 90082.0 True False 105834.36313386269 112968.9150726986 133323.81540708573 142968.38314570472 118936.83470641683 137615.69495345207 106809.00989804878 122324.2089000653 178097.50950168824 89283.9435627355 1.1853683754402942 1.2652769419097267 1.4932563469646203 1.6012776479261108 1.3321189674249287 1.5413263512129276 1.1962846356915147 1.3700583108105435 1.9947316661315229 1.0 16.4461131302017 -4.642762402217437 4.462900851939066 1.4506594558113333 1.2038120215270227 0.1095435433289117 0.24860364578478378 0.4259851506062823 14.161561580605703 0.061568629300697446 0.178112544840932 2.2763424523435894e-05 4.642762402217437 -0.24684743428431055 ENPEDVLS(ph)PTSVATYLSSK ddPTM_KYSE-520_SHP099_60min_R1 4 ENPEDVLSPTSVATYLSSK 19 0 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;Q5JTU8;B1AMJ5 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 ENPEDVLS(0.925)PT(0.027)S(0.048)VATYLSSK;ENPEDVLS(0.963)PT(0.012)S(0.017)VAT(0.008)YLSSK;ENPEDVLS(0.582)PT(0.417)S(0.001)VATYLSSK;ENPEDVLS(0.944)PT(0.051)S(0.005)VATYLSSK 272.64 1.9154e-35 342444000.0 310490.0 432237.0 319185.0 270571.0 298573.0 412998.0 316175.0 413290.0 498256.0 444036.0 True False 293266.5007535304 411471.6857190361 339760.1758140565 296285.9864898626 322068.9964520136 410420.3262881707 348137.05457063747 411856.3934526112 407785.2704116221 440102.18649478006 0.6663600176342427 0.9349457883775282 0.7720029262296935 0.6732208918334397 0.7318050360466309 0.9325568899281953 0.7910368665590954 0.9358199211252866 0.9265695170920465 1.0 18.747479013716056 -7.238630810082559 0.7998750490329373 0.9912635899550618 0.7680202376156169 0.4791356820973002 0.08429587910703952 0.5934181532399423 0.7055280661120938 0.07837641041329135 0.03559152154071953 5.772569759481212e-08 7.238630810082559 -0.22324335233944492 ENPEDVLSPT(ph)SVATYLSSK ddPTM_KYSE-520_SHP099_60min_R1 2 ENPEDVLSPTSVATYLSSK 19 0 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;Q5JTU8;B1AMJ5 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 ENPEDVLS(0.072)PT(0.749)S(0.179)VATYLSSK;ENPEDVLS(0.376)PT(0.44)S(0.184)VATYLSSK 219.06 4.887599999999999e-18 270134000.0 179816.0 226776.0 155621.0 143643.0 152623.0 230272.0 161261.0 219185.0 248840.0 234623.0 True False 169841.24802569073 215881.3405622843 165652.5786624039 157294.78753215732 164633.56179391878 228834.78703293842 177562.835635694 218424.69839316353 203656.9287459222 232544.422753932 0.7303604447456865 0.928344520181076 0.7123481040768281 0.676407482361336 0.7079660730806973 0.9840476254942525 0.7635652299585914 0.9392816039466604 0.8757764487924217 1.0 17.827146813732867 -6.252026445557358 24.7642889028604 0.8994287239426548 0.7546322188506431 0.4493308800798801 0.08873071134818748 643.2794746176523 1692391.261265257 0.029979340639584767 0.02958716921291537 5.597235171314373e-07 6.252026445557358 -0.1447965050920117 ENPEEKVPEKPPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 ENPEEKVPEKPPTPK 15 2 Q9HDC5 Q9HDC5 JPH1 Junctophilin-1 1 ENPEEKVPEKPPT(1)PK;ENPEEKVPEKPPT(1)PK;ENPEEKVPEKPPT(1)PK 118.46 0.00010991 3988640000.0 2270960.0 2698690.0 1756920.0 1819790.0 1798030.0 2506860.0 1765080.0 2497560.0 3364140.0 2034190.0 True False 2144985.3217534763 2569040.881583723 1870173.8743713936 1992742.2944601853 1939524.7316087298 2491213.756867501 1943511.5119207422 2488896.5472948854 2753296.979068097 2016168.6591758723 1.0638918088481044 1.274219232548651 0.9275880099911108 0.9883807514767823 0.9619853591026103 1.2356177373999095 0.9639627632715859 1.2344684240415904 1.3656084606500791 1.0 20.943184899421393 -7.2837221736060185 24.202085269477926 1.2250288883882559 1.0628741568371591 0.17330129845029962 0.13740868766278844 851.480555452053 924814.2541200456 0.0736844295534277 0.035445380028177424 5.203287542316466e-08 7.2837221736060185 -0.16215473155109672 ENQINS(ph)FGK ddPTM_KYSE-520_SHP099_60min_R1 1 ENQINSFGK 9 0 F5H5B4;Q13043-2;Q13043 F5H5B4 STK4 Serine/threonine-protein kinase 4;Serine/threonine-protein kinase 4 37kDa subunit;Serine/threonine-protein kinase 4 18kDa subunit 1 ENQINS(1)FGK 104.17 0.0024413 0.0 466230.0 456890.0 422570.0 384480.0 419920.0 389000.0 352660.0 389630.0 534750.0 375260.0 True False 440367.29249353753 434940.3185941281 449809.53833590524 421020.8636018729 452965.31498202914 386572.1067077763 388310.31442992407 388278.46447032556 437652.8799504976 371935.4883478618 1.1839883697295193 1.1693971998373534 1.2093751535621409 1.131972819996415 1.2178598955267808 1.0393525727403168 1.0440259845996394 1.0439403515783323 1.1766902961977428 1.0 18.504692884179704 -6.265654951729042 24.99048835619035 1.0624996187326403 1.1804736393159012 0.6178375198339157 0.047841012232688364 248.39888438239134 1472538.227696917 0.01605467004512023 0.014660536794741726 5.424316828480851e-07 6.265654951729042 0.1179740205832609 ENQPENSQT(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 1 ENQPENSQTPTK 12 0 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENSQT(0.999)PT(0.001)K 203.32 1.0062000000000001e-07 340110000.0 289190.0 377000.0 288040.0 262110.0 249490.0 399610.0 281160.0 357120.0 387650.0 399420.0 True False 273148.0542140275 358888.3541114635 306607.5192802949 287020.85559375474 269123.4435960813 397115.8857621968 309582.3966571696 355881.2340724348 317262.53186126257 395881.449544058 0.6899743711876769 0.9065551177626535 0.7744932722496063 0.72501718866676 0.6798081696074276 1.003118196671151 0.7820078384923563 0.8989591062736281 0.8014079271121648 1.0 18.59470894069895 -6.25062153708755 24.979201617278544 0.8835903882909113 0.7629783344819298 0.3817639544988507 0.08920878272738961 907.4835850328965 2095447.4553505327 0.02908526846488521 0.02880880139301703 5.615371104932292e-07 6.25062153708755 -0.12061205380898155 ENQPENSQT(ph)PTKK ddPTM_KYSE-520_SHP099_60min_R1 14 ENQPENSQTPTKK 13 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 ENQPENS(0.001)QT(0.816)PT(0.182)KK;ENQPENS(0.428)QT(0.572)PTKK;ENQPENS(0.015)QT(0.848)PT(0.137)KK;ENQPENS(0.084)QT(0.908)PT(0.008)KK;ENQPENSQT(1)PTKK;ENQPENS(0.017)QT(0.863)PT(0.119)KK;ENQPENSQT(0.998)PT(0.001)KK;ENQPENSQT(0.999)PTKK;ENQPENSQT(0.999)PT(0.001)KK;ENQPENS(0.006)QT(0.992)PT(0.002)KK;ENQPENSQT(1)PTKK;ENQPENS(0.003)QT(0.996)PT(0.002)KK;ENQPENSQT(0.999)PTKK;ENQPENS(0.027)QT(0.971)PT(0.002)KK 224.67 2.1649e-12 78956230000.0 19091370.0 21174300.0 17132920.0 14347260.0 14140990.0 19340330.0 15127980.0 17579690.0 20984220.0 19100330.0 True False 18032333.648397446 20157054.844727736 18237335.43684125 15710819.27673899 15253805.461773047 19219619.826538857 16657263.853256932 17518710.158520486 17174014.617138542 18931115.936031878 0.9525235442711665 1.0647578786606293 0.9633523717495097 0.8298939866950131 0.805753105802931 1.0152396663504588 0.8798881116962002 0.9253923655486607 0.9071844826881538 1.0 24.17425612057418 -5.004175209811597 24.686888430613568 0.9042144110289209 1.0099943386898116 0.26869661623482033 0.06638574690285831 179.84360921364183 1063398.276251983 0.01733121595342523 0.03474570402678654 9.904322887345e-06 5.004175209811597 0.10577992766089073 ENQRS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 5 ENQRSPVR 8 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 ENQRS(1)PVR;ENQRS(1)PVR;ENQRS(1)PVR;ENQRS(1)PVR;ENQRS(1)PVR 93.959 0.0024551 4728090000.0 2259850.0 1902210.0 1725760.0 1730940.0 1933800.0 2161940.0 1944410.0 1618440.0 2268240.0 2150520.0 True False 2134491.6156007117 1810824.976324579 1837005.2509136286 1895448.0171739126 2085979.0581831038 2148446.5305290762 2140969.9384128824 1612826.0093867343 1856384.7936772646 2131468.065879244 1.0014185292146145 0.8495670215812511 0.8618497646390271 0.8892687849827243 0.978658367711751 1.0079656199976088 1.0044579004892193 0.7566737851741793 0.8709418749426556 1.0 21.023416010015293 -10.476816373582434 3.305371300155666 1.0016319876980588 0.9120837114995071 0.09660297883471824 0.07933248294820572 33656505.74337214 45542364.034393705 494907.3248740808 0.021181374909253602 3.3356742041058417e-11 10.476816373582434 -0.08954827619855177 ENQSEGKGS(ph)DSDS(ph)EGDNPEKK ddPTM_KYSE-520_SHP099_60min_R1 1 ENQSEGKGSDSDSEGDNPEKK 21 2 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 2 ENQS(0.005)EGKGS(0.99)DS(0.331)DS(0.674)EGDNPEKK 126.36 3.9923000000000004e-05 494420000.0 1883200.0 1508800.0 1478700.0 1611300.0 1552700.0 1561500.0 1533500.0 1778800.0 1976500.0 1576700.0 True False 1778735.141933873 1436314.9832450284 1574019.368003654 1764437.4675449885 1674888.6563454878 1551754.0992909842 1688521.1455177448 1772629.7579750402 1617617.423510348 1562731.6646540381 1.1382217319616765 0.9191053177789188 1.0072230592141453 1.129072576855736 1.0717698337009631 0.9929753996726725 1.0804933333782254 1.1343148654810613 1.0351216783391028 1.0 20.575638644969775 -5.144272538303627 21.224105046988935 1.0672092781876479 1.011267314814362 0.06876908412885963 0.06649275919951239 13.499590425343223 2408.4828622113178 0.017592986351574372 0.03047197132606771 7.1734398605792214e-06 5.144272538303627 -0.05594196337328583 ENS(ph)FGSPLEFR ddPTM_KYSE-520_SHP099_60min_R1 6 ENSFGSPLEFR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ENS(0.963)FGS(0.037)PLEFR;ENS(0.964)FGS(0.036)PLEFR;ENS(0.94)FGS(0.06)PLEFR;ENS(0.844)FGS(0.156)PLEFR;ENS(0.997)FGS(0.003)PLEFR;ENS(0.646)FGS(0.354)PLEFR 211.39 1.3278000000000001e-09 703159000.0 988561.0 894569.0 833987.0 810607.0 883405.0 920892.0 754413.0 909376.0 974835.0 880417.0 True False 933723.5506825043 851592.5624645556 887747.1364463803 887646.8455621196 952923.9476131161 915144.3714404574 830676.4284013549 906221.5869059537 797829.5375905427 872617.1903340616 1.0700265374385411 0.9759062414740453 1.0173385836079238 1.017223652472746 1.0920297676559763 1.0487352089524105 0.951936814450503 1.0385098952256802 0.9142950040728762 1.0 19.734989369152164 -6.752769346874633 24.999532792234152 0.9793945845148918 1.0348308322598896 0.33137996582841045 0.04207490807246683 246.99780854081567 712205.1578139559 0.01618590984846432 0.012337191818698438 1.7669760097453813e-07 6.752769346874633 0.05543624774499778 ENS(ph)PAAFPDREGVPPTALFHPMPVLPK ddPTM_KYSE-520_SHP099_60min_R1 1 ENSPAAFPDREGVPPTALFHPMPVLPK 27 1 A0A0A0MR03;Q9Y5B0;K7EJD2;A0A0J9YWJ4;A0A0J9YWB6;Q9Y5B0-4 A0A0A0MR03;Q9Y5B0-4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 ENS(0.994)PAAFPDREGVPPT(0.006)ALFHPMPVLPK 68.708 0.017484 295700000.0 251100.0 295640.0 288980.0 197450.0 264410.0 254220.0 195560.0 191470.0 318900.0 189270.0 True False 237170.9824445599 281437.01063531294 307608.1131843484 216215.58863449303 285217.56271289417 252633.3186818789 215329.11328167585 190805.83525943404 260995.79881479865 187593.2150498317 1.2642833717709807 1.5002515446017217 1.6397614012992756 1.1525768060271167 1.5204044700504218 1.3467081877922407 1.147851286756168 1.017125460581018 1.3912859201515817 1.0 17.517248123233717 -6.685991722002375 3.8449104030287238 1.1385982070551333 1.419076417441074 0.3989146071742451 0.1609126751416938 0.23142111941080418 6.681595514388789 0.06427472164993255 0.047394524227465276 2.0606691908864765e-07 6.685991722002375 0.2804782103859407 ENS(ph)PAVS(ph)PTTNSTAPFGLKPR ddPTM_KYSE-520_SHP099_60min_R1 10 ENSPAVSPTTNSTAPFGLKPR 21 1 Q9Y2L9-2;Q9Y2L9;Q9Y2L9-3 Q9Y2L9-2 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 2 ENS(0.989)PAVS(0.974)PT(0.028)T(0.009)NSTAPFGLKPR;ENS(1)PAVS(0.96)PT(0.031)T(0.006)NS(0.001)T(0.001)APFGLKPR;ENS(1)PAVS(0.832)PT(0.151)T(0.016)NSTAPFGLKPR;ENS(0.999)PAVS(0.966)PT(0.028)T(0.006)NSTAPFGLKPR;ENS(0.995)PAVS(0.45)PT(0.45)T(0.094)NS(0.005)T(0.006)APFGLKPR;ENS(1)PAVS(0.963)PT(0.03)T(0.007)NSTAPFGLKPR;ENS(1)PAVS(0.999)PT(0.001)TNSTAPFGLKPR;ENS(1)PAVS(0.975)PT(0.022)T(0.003)NSTAPFGLKPR;ENS(1)PAVS(0.984)PT(0.014)T(0.002)NSTAPFGLKPR;ENS(1)PAVS(0.897)PT(0.087)T(0.016)NSTAPFGLKPR 147.17 7.085800000000001e-07 26218590000.0 12349580.0 10567520.0 9345260.0 11017610.0 11138610.0 10950920.0 10572320.0 11375590.0 12091370.0 10906790.0 True False 11664524.1791226 10059840.477029087 9947670.412544666 12064720.341834774 12015155.236978425 10882571.246242492 11641073.281499954 11336130.733372653 9895882.006633095 10810164.325954223 1.0790330125803118 0.93059089332031 0.9202145418512475 1.1160533714430665 1.1114683250587716 1.006698040668487 1.0768636748241462 1.048654802236043 0.9154238278204505 1.0 23.365885117944355 -5.251750612668034 24.984100051344857 1.0445487915568044 0.9720106294383632 0.146516758725192 0.06826052715129852 1188.7354825917932 3065344.959948078 0.018851730435342613 0.032110716280694424 5.600791265176463e-06 5.251750612668034 -0.07253816211844111 ENS(ph)REALAEAALESPRPALVR ddPTM_KYSE-520_SHP099_60min_R1 1 ENSREALAEAALESPRPALVR 21 2 O14745;O14745-2 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 ENS(0.998)REALAEAALES(0.002)PRPALVR 79.236 0.0058387 547010000.0 246030.0 250100.0 254010.0 199880.0 207710.0 245500.0 232050.0 208080.0 313720.0 252020.0 True False 232382.22545135432 238084.82059224643 270383.89103036997 218876.5351038865 224055.59529176346 243967.7434363987 255507.87858975728 207358.2190462369 256756.35623762503 249787.2988685933 0.930320422631275 0.9531502268956308 1.0824565230300682 0.8762516592928604 0.8969855405243538 0.97670195619011 1.0229018038430107 0.8301391623411675 1.0278999668942255 1.0 17.930340595397293 ENS(ph)SPSVTSANLDHTKPCWYWDK ddPTM_KYSE-520_SHP099_60min_R1 1 ENSSPSVTSANLDHTKPCWYWDK 23 1 G3V5E1;O75909-1;O75909;O75909-4;G3V235;G3V2Q3;O75909-2 G3V5E1 CCNK Cyclin-K 1 ENS(0.594)S(0.402)PS(0.003)VT(0.001)SANLDHTKPCWYWDK 135.3 8.0762e-07 296590000.0 201250.0 201420.0 143630.0 179570.0 175590.0 168480.0 180940.0 180110.0 201000.0 180660.0 True False 190086.261318071 191743.48086241627 152888.6196161256 196636.27881031088 189407.9340295641 167428.45382551735 199231.18100422624 179485.24044799016 164503.46679766255 179059.492951353 1.061581590481292 1.0708367241635677 0.8538425810111194 1.0981617091015283 1.0577933116398501 0.9350437168444592 1.1126535528521435 1.0023776873798746 0.9187084364321023 1.0 17.450079480505458 -7.534945075091495 22.77420195804948 0.9597503409684238 1.0250160254509344 0.11000238296147113 0.07631604817591149 184.2713040464689 347772.837370636 0.0502327550702281 0.01903519948887892 2.9177960022144626e-08 7.534945075091495 0.06526568448251058 ENS(ph)SPSVTSANLDHTKPCWYWDKK ddPTM_KYSE-520_SHP099_60min_R1 1 ENSSPSVTSANLDHTKPCWYWDKK 24 2 G3V5E1;O75909-1;O75909;O75909-4;G3V235;G3V2Q3;O75909-2 G3V5E1 CCNK Cyclin-K 1 ENS(0.796)S(0.203)PS(0.001)VTSANLDHTKPCWYWDKK 102.72 0.0010083 1246300000.0 808730.0 753500.0 702510.0 910940.0 784830.0 690690.0 721880.0 726940.0 1000800.0 662640.0 True False 763868.1347367143 717300.7289734415 747794.9186557429 997515.4637159028 846591.6559281439 686379.147511553 794854.675269872 724418.4148090716 819079.9481149279 656769.5251261183 1.1630687867102696 1.0921650617630279 1.1385956413129021 1.5188211778315255 1.289023962805787 1.0450837337188397 1.2102490217055022 1.103002479705438 1.247134522506417 1.0 19.32502766036885 -6.24756723523136 24.758783250136123 1.1331037936833133 1.2419225427474763 0.1755091560189167 0.12788186274919977 1523.4648324184118 2719057.6135460204 0.04531179140241389 0.04509801507712307 5.655002024877631e-07 6.24756723523136 0.108818749064163 ENS(ph)SSQDPQTEGTR ddPTM_KYSE-520_SHP099_60min_R1 1 ENSSSQDPQTEGTR 14 0 A0A0C4DG49;P15151-3;P15151-2;P15151 A0A0C4DG49 PVR Poliovirus receptor 1 ENS(0.333)S(0.333)S(0.333)QDPQTEGTR 152.94 2.006e-05 80876000.0 234120.0 275520.0 157220.0 183330.0 463750.0 533990.0 212890.0 235630.0 282320.0 934220.0 True False 221132.89689335093 262283.60563604883 167354.65276089413 200753.62807982584 500244.4866234432 530657.1703364666 234410.998806177 234812.65452645568 231057.80470804012 925943.537612161 0.2388189861593637 0.28326090628855216 0.18073958720255356 0.2168097944692532 0.5402537695910511 0.5730988432674139 0.2531590634680383 0.2535928433951756 0.24953768272296162 1.0 19.820564697630246 -10.667168279903056 2.802081890395688 1.0801263292290635 0.31378615233733953 0.7236563433451179 0.12791210663136926 35854924.43987896 33019283.63667612 20565805.817235075 0.03709683938438788 2.151947739037521e-11 10.667168279903056 -0.766340176891724 ENSFGS(ph)PLEFR ddPTM_KYSE-520_SHP099_60min_R1 12 ENSFGSPLEFR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ENSFGS(1)PLEFR;ENSFGS(1)PLEFR;ENSFGS(1)PLEFR;ENS(0.006)FGS(0.994)PLEFR;ENS(0.205)FGS(0.795)PLEFR;ENS(0.005)FGS(0.995)PLEFR;ENSFGS(1)PLEFR;ENSFGS(1)PLEFR;ENSFGS(1)PLEFR;ENS(0.007)FGS(0.993)PLEFR;ENSFGS(1)PLEFR;ENSFGS(1)PLEFR 253.59 6.1207999999999996e-15 36867230000.0 20618710.0 18334750.0 16367030.0 18100730.0 18682090.0 19299180.0 18805090.0 19135840.0 20754660.0 19182690.0 True False 19474949.053920627 17453921.088979192 17422074.9419739 19821017.9370171 20152264.19644841 19178726.658952687 20706092.017192256 19069462.23737862 16986136.926401872 19012746.290507007 1.024310152586657 0.9180115708846265 0.9163365815633208 1.042512093421962 1.0599344191801665 1.0087299523124944 1.0890637102505665 1.0029830486351112 0.893407857384758 1.0 24.180463600907746 -5.266149877831882 24.934450011137134 1.01877518265222 0.9493986483459564 0.194997480500687 0.05595333537882325 567.3864219663 3003393.7408117466 0.016107581568693533 0.024818189917705513 5.418138746642537e-06 5.266149877831882 -0.06937653430626356 ENSFGS(ph)PLEFRNSGPLGTEMNTGFSSEVK ddPTM_KYSE-520_SHP099_60min_R1 1 ENSFGSPLEFRNSGPLGTEMNTGFSSEVK 29 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 ENS(0.008)FGS(0.858)PLEFRNS(0.126)GPLGT(0.008)EMNT(0.001)GFSSEVK 84.855 0.0036425 50512000.0 36141.0 42489.0 24312.0 24673.0 32426.0 36970.0 29165.0 33543.0 44117.0 36807.0 True False 34136.186684702676 40447.76466271077 25879.190420575385 27017.91450179206 34977.741721297614 36739.25651667481 32113.282822970352 33426.647161995046 36106.46489906702 36480.918615412695 0.9357271686212583 1.1087375591913449 0.7093897687554879 0.7406040068951925 0.9587955306180254 1.0070814527448049 0.8802761564617763 0.9162775618230387 0.9897356280883927 1.0 15.154854437594167 ENSQLDTS(ph)PPCLGGNKK ddPTM_KYSE-520_SHP099_60min_R1 1 ENSQLDTSPPCLGGNKK 17 1 Q9Y3E2 Q9Y3E2 BOLA1 BolA-like protein 1 1 ENSQLDT(0.332)S(0.667)PPCLGGNKK 99.40700000000001 0.00063377 617260000.0 990510.0 857990.0 887640.0 737890.0 800870.0 918640.0 727010.0 840450.0 1090700.0 928900.0 True False 935564.4357672688 816770.8725307543 944858.694674215 808018.8437452811 863893.9126730273 912906.4270077931 800503.265733848 837534.6751125046 892656.3743095055 920670.6686732642 1.0161770843807452 0.8871477069077968 1.0262721805135893 0.8776415620035768 0.9383310906580142 0.9915667546174141 0.8694784063094093 0.9097006167465257 0.9695718617775356 1.0 19.812325659374785 -4.232199122357915 23.26421674127813 0.9381912890558457 1.0161773949751154 0.15521558002501723 0.05217006533030362 7676.135331483034 6107057.364741382 0.012305811771577375 1.1372984993363262 5.858694840079381e-05 4.232199122357915 0.07798610591926969 ENSS(ph)PENKNWLLAMAAK ddPTM_KYSE-520_SHP099_60min_R1 3 ENSSPENKNWLLAMAAK 17 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ENS(0.242)S(0.758)PENKNWLLAMAAK;ENS(0.248)S(0.752)PENKNWLLAMAAK;ENS(0.269)S(0.731)PENKNWLLAMAAK 162.32 2.8706e-08 11561270000.0 1531690.0 1440440.0 1549290.0 1320040.0 1498510.0 1484170.0 1382630.0 1257020.0 1665200.0 1493480.0 True False 1446724.1023516837 1371239.100255482 1649159.712351648 1445496.2047155024 1616434.2116444118 1474906.7445050927 1522399.733568437 1252659.691010674 1362841.6562759576 1480248.9291098583 0.9773518993333542 0.9263570966270321 1.114109714873 0.9765223782899446 1.0920016085513724 0.9963910228207508 1.0284754838390093 0.8462493479147158 0.9206841021634765 1.0 20.49740837936341 -7.2410108814824685 24.802294055340308 0.9126000400372136 1.0168849843971528 0.31617785897677886 0.06256462594364964 737.6434479325233 895576.7865422923 0.028730137290598385 0.016561871658841012 5.741020775899414e-08 7.2410108814824685 0.10428494435993918 ENTEGEYSGIEHVIVDGVVQSIK ddPTM_KYSE-520_SHP099_60min_R1 3 ENTEGEYSGIEHVIVDGVVQSIK 23 0 H0YLI6;H0YMU3;H0YL72;P50213-2;P50213 H0YLI6 IDH3A Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial 0 ;; 220.23 8.719700000000001e-21 227418000.0 427507.0 468494.0 251762.0 730639.0 352110.0 293484.0 355634.0 355113.0 313078.0 224745.0 False True 403792.3344959242 445986.8450161697 267990.9813534428 800078.7108853739 379819.0537681518 291652.2574936375 391584.9553733666 353881.19588699704 256230.92725412213 222753.9341489642 1.8127281838528273 2.0021502503202524 1.2030808002440345 3.5917601812156104 1.7051059287426638 1.309302386096572 1.757926102941457 1.588664178879745 1.1502868770109826 1.0 17.765091386440258 -5.991679410744588 24.99982311560943 1.4321963342336232 2.1457033279082087 0.2793675900767767 0.5935527937627363 283.76433262708133 852584.1124988956 0.18421031467516139 0.20854360478425202 1.019343573552063e-06 5.991679410744588 0.7135069936745855 ENVEYIEREES(ph)DGEYDEFGR ddPTM_KYSE-520_SHP099_60min_R1 11 ENVEYIEREESDGEYDEFGR 20 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 ENVEY(0.001)IEREES(0.968)DGEY(0.031)DEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR;ENVEYIEREES(1)DGEYDEFGR 268.24 1.3242e-35 31109800000.0 13996505.0 15027337.0 14308460.0 13437019.0 13951673.0 13279754.0 11217086.0 14254787.0 18765815.0 13672320.0 True False 13220090.966309004 14305401.1740273 15230806.225945441 14714069.245772935 15049590.290939394 13196870.129411362 12351018.521089697 14205340.470989289 15358416.043699363 13551193.881703991 0.9755665133061063 1.0556561509566764 1.1239457097952943 1.0858134991071886 1.1105730183123161 0.9738529493869159 0.9114339761432608 1.0482722478178463 1.1333625788083053 1.0 23.69191662511453 -6.262020550236573 24.995086634073687 1.0100294681768818 1.0733377791155934 0.16070185254306568 0.06463675467329463 102.99747987040205 4429680.721389687 0.023792071196732233 0.022266879165291298 5.469900794394088e-07 6.262020550236573 0.06330831093871159 ENVEYIEREES(ph)DGEYDEFGRK ddPTM_KYSE-520_SHP099_60min_R1 10 ENVEYIEREESDGEYDEFGRK 21 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 ENVEYIEREES(1)DGEYDEFGRK;ENVEYIEREES(1)DGEYDEFGRK;ENVEYIEREES(1)DGEYDEFGRK;ENVEYIEREES(0.999)DGEY(0.001)DEFGRK;ENVEYIEREES(1)DGEYDEFGRK;ENVEYIEREES(1)DGEYDEFGRK;ENVEYIEREES(1)DGEYDEFGRK;ENVEYIEREES(1)DGEYDEFGRK;ENVEYIEREES(1)DGEYDEFGRK;ENVEYIEREES(0.998)DGEY(0.002)DEFGRK 176.7 1.2316e-09 15989340000.0 2560663.0 2761556.0 2778387.0 2456516.0 2321469.0 2554221.0 1979823.0 2392657.0 3550632.0 2358985.0 True False 2418617.9188348623 2628886.704579937 2957486.2715963786 2689982.5420615347 2504155.4029482226 2538279.159298828 2179962.830050457 2384357.431317345 2905926.7329488443 2338086.228162557 1.0344434220185255 1.1243754284656613 1.2649175363906886 1.1505061317501213 1.0710278230055592 1.085622561189113 0.9323705874456284 1.0197902038844613 1.242865510239346 1.0 21.156896706485675 -5.831968565461109 3.8506041794685335 1.0523829253264056 1.1512406037024683 0.1715576418876913 0.09105592625397198 0.39148860292149 11.449763513183868 0.03006638408657414 0.03538634291585526 1.4724190733000198e-06 5.831968565461109 0.09885767837606263 ENVGFRT(ph)PTIR ddPTM_KYSE-520_SHP099_60min_R1 2 ENVGFRTPTIR 11 1 P10243;P10243-2;E7EWZ1 P10243 MYBL1 Myb-related protein A 1 ENVGFRT(0.659)PT(0.341)IR;ENVGFRT(0.997)PT(0.003)IR 138.55 0.00013457 311630000.0 241110.0 230830.0 239490.0 189227.0 196561.0 214510.0 183693.0 196891.0 254630.0 247930.0 True False 227735.14765913103 219740.58031710619 254927.90859754846 207211.07718682807 212029.23242089615 213171.16352155583 202262.48111091708 196208.0310757047 208395.6106999442 245733.53308662132 0.9267564943155485 0.8942230128585967 1.0374160392171063 0.8432348429784142 0.8628420783994329 0.8674891084010613 0.8230967852467224 0.798458511588409 0.8480552413108574 1.0 17.906735217431002 -5.306250387523559 24.961965519368125 0.85339231770685 0.9469410659043401 0.30096296858524174 0.06100931869401337 464.9550354722066 259002.1515843949 0.016481956394248626 0.024446813742285297 4.940257799435099e-06 5.306250387523559 0.09354874819749015 EPAITSQNS(ph)PEAR ddPTM_KYSE-520_SHP099_60min_R1 6 EPAITSQNSPEAR 13 0 E5RIS7;A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193 E5RIS7 TCEA1 Transcription elongation factor A protein 1 1 EPAITSQNS(1)PEAR;EPAITS(0.024)QNS(0.976)PEAR;EPAITSQNS(1)PEAR;EPAITSQNS(1)PEAR;EPAITSQNS(1)PEAR;EPAITSQNS(1)PEAR 297.96 1.7393e-30 16447600000.0 7064190.0 6291950.0 5743550.0 5331610.0 5507960.0 6217180.0 5520010.0 6371810.0 7234140.0 6080290.0 True False 6672325.2985863695 5989675.277590502 6113788.423004919 5838324.611392999 5941405.115994521 6178376.273474183 6078026.480906037 6349707.678301641 5920602.533829057 6026423.360994037 1.1071783210208772 0.9939021736107378 1.0144970004225642 0.9687876642025343 0.9858924207765097 1.0252144436887158 1.0085628102808044 1.0536444749965723 0.9824405255279766 1.0 22.52287059628114 -4.257698040586357 24.951098703194827 1.0048569788608177 1.107178361322295 0.6490427252239304 0.022821163867562194 228.50917556512232 1523870.7221758568 0.005834334682285074 0.04172937610482249 5.524614251570616e-05 4.257698040586357 0.10232138246147726 EPAKPS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 EPAKPSPSR 9 1 Q15311 Q15311 RALBP1 RalA-binding protein 1 1 EPAKPS(0.5)PS(0.5)R 69.815 0.036961 803630000.0 1214000.0 1114300.0 1086900.0 1026700.0 1089500.0 1196100.0 1207600.0 1217400.0 1324800.0 1134300.0 True False 1146656.999950998 1060767.3554016012 1156963.3131014886 1124277.2593113899 1175237.451592972 1188634.6962292327 1329675.9930402525 1213177.1235432967 1084249.7154902655 1124250.984472047 1.0199297272481134 0.9435325119148034 1.0290969979846656 1.0000233709729462 1.0453514987535175 1.057268094621612 1.1827216621604062 1.07909811981442 0.9644196273480994 1.0 20.10053271665538 -5.844349950123461 2.1226111789220274 1.06893149863938 0.9936202864180692 0.1746848449648596 0.05770456996009203 0.4723276086139889 4.36308756487529 0.020673733155140504 0.025162297440607263 1.4310343215086907e-06 5.844349950123461 -0.07531121222131087 EPAKPSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 EPAKPSPSR 9 1 Q15311 Q15311 RALBP1 RalA-binding protein 1 1 EPAKPS(0.38)PS(0.62)R;EPAKPS(0.4)PS(0.6)R;EPAKPS(0.002)PS(0.998)R;EPAKPS(0.352)PS(0.648)R 87.21600000000001 0.0072068 2183650000.0 2369180.0 1998500.0 1874160.0 1980720.0 2168070.0 2130340.0 2213130.0 2483010.0 2173480.0 2151690.0 True False 2237756.8625567593 1902489.060190341 1994971.352362026 2168967.033274815 2338684.7743691397 2117043.7578504984 2436854.778467352 2474397.0178488893 1778830.8209720575 2132627.7005894873 1.0492955999484639 0.892086818371752 0.9354522366049117 1.0170396983380094 1.0966212122831827 0.9926926098096347 1.142653627632133 1.1602573750518819 0.8341028396472411 1.0 21.02420070125047 -5.4272947948670645 4.498777911819664 1.0493904029395718 0.9532327905574062 0.11414656589219385 0.09413420131792362 0.4039172782889129 13.82645516410141 0.026653423635309453 0.03988342507078669 3.738567318135731e-06 5.4272947948670645 -0.09615761238216558 EPAPAS(ph)PAPAGVEIR ddPTM_KYSE-520_SHP099_60min_R1 1 EPAPASPAPAGVEIR 15 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 EPAPAS(1)PAPAGVEIR 120.63 0.00012244 219620000.0 132250.0 134220.0 151200.0 122140.0 126000.0 154750.0 132200.0 143520.0 171100.0 179200.0 True False 124913.82886616112 127771.86973167269 160946.59392855383 133748.14887726982 135915.4831580675 153784.1478484022 145564.06614766602 143022.16261781973 140032.55308000025 177612.42741549035 0.7032944185484784 0.7193858650035496 0.9061674133423672 0.7530337309359079 0.7652363358568328 0.8658411468509102 0.819560141516149 0.8052486230777461 0.7884164138606181 1.0 17.438373004004593 -13.999999999999996 0.17023449171829083 1.782096943596233 0.7472831526686782 0.5611861663373579 0.05691644922667039 105.84457553211469 0.9982363876910686 28.069938893981735 0.2130447629510732 1.0000000000000082e-14 13.999999999999996 -1.0348137909275548 EPAPLLSAQYETLS(ph)DS(ph)DD ddPTM_KYSE-520_SHP099_60min_R1 1 EPAPLLSAQYETLSDSDD 18 0 A0A088AWL3;O75376-2;O75376;E7EVK1 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 2 EPAPLLSAQYET(0.002)LS(0.999)DS(0.999)DD 111.12 0.00010654 100540000.0 140540.0 140310.0 115310.0 107730.0 122360.0 154760.0 124680.0 153560.0 178190.0 138420.0 True False 132743.9660404557 133569.29699039643 122743.0671025234 117968.62680979444 131989.03586683449 153794.08543469274 137283.8711595387 153027.33620117334 145835.1878043554 137193.70648913056 0.9675660016589216 0.9735818093155659 0.8946698084306656 0.8598690845861849 0.962063342732792 1.1209995660178287 1.0006572070448092 1.1154107583885216 1.0629874469927634 1.0 17.065854776463766 -6.086114398585243 5.610018308076122 1.0627255967733813 0.9236472062660849 0.6440716106285533 0.048346676334410796 0.14220118437466722 7.182036517637039 0.01619513369376723 0.016329916549326275 8.20135481955494e-07 6.086114398585243 -0.13907839050729642 EPASCES(ph)PHLK ddPTM_KYSE-520_SHP099_60min_R1 1 EPASCESPHLK 11 0 A0A3B3IS79;F5H527;Q76I76;K7EKN7 A0A3B3IS79 SSH2 Protein phosphatase Slingshot homolog 2 1 EPAS(0.126)CES(0.874)PHLK 51.211000000000006 0.050565 180910000.0 176050.0 193350.0 257660.0 71499.0 37603.0 126690.0 192170.0 106570.0 122120.0 175690.0 True False 166284.15555302572 184061.1757757331 274269.1758705765 78294.24346304181 40562.14216819696 125899.28071673075 211596.41899846445 106200.33354362498 99946.08639467931 174133.52328475186 0.9549232819524908 1.057011724702469 1.575050976382519 0.44962188776833706 0.2329370095031484 0.7230042690335619 1.2151389060936382 0.6098787386846867 0.5739623508980661 1.0 17.40983444434705 -5.273411510897146 24.998322900113976 0.6747745177173927 1.1817969881805825 0.38111668683324995 0.29699696491045274 815.3864146278192 1702559.9605533225 0.08921029040134028 0.13346949645855602 5.328297792965548e-06 5.273411510897146 0.5070224704631898 EPDCFKDIVNMLMHHDR ddPTM_KYSE-520_SHP099_60min_R1 2 EPDCFKDIVNMLMHHDR 17 1 P11216;H0Y4Z6 P11216 PYGB Glycogen phosphorylase, brain form;Alpha-1,4 glucan phosphorylase 0 ; 164.57 1.4463e-07 509900000.0 449030.0 503330.0 419780.0 273110.0 439090.0 330240.0 233300.0 244483.0 385580.0 154640.0 False True 424121.41078088724 479149.2712862672 446839.69047174713 299066.2922864847 473643.8849196498 328178.8496636917 256884.2407885816 243634.94553576095 315568.3916808093 153270.00990809937 2.7671519760140306 3.126177597127872 2.9153758829902343 1.9512381611106093 3.0902580694269313 2.1411811081663505 1.6760241676934013 1.589580020787135 2.0589050125985118 1.0 17.22571590927086 -6.661400479483416 0.3080162533015025 0.9591254743081594 3.3109824458431487 0.709195181068843 0.36757910235462654 1.0387836958141665 0.2533797360849741 0.5463774070400382 0.8801967093042011 2.18071806119886e-07 6.661400479483416 2.351856971534989 EPDPPDDRDAS(ph)DGEDEKPPLPPR ddPTM_KYSE-520_SHP099_60min_R1 2 EPDPPDDRDASDGEDEKPPLPPR 23 2 O15357 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 1 EPDPPDDRDAS(1)DGEDEKPPLPPR;EPDPPDDRDAS(1)DGEDEKPPLPPR 79.382 0.0015314 0.0 298930.0 296650.0 261210.0 253930.0 321830.0 265900.0 282540.0 271250.0 343920.0 285490.0 True False 282347.7569978186 282398.4887192719 278048.01455077704 278063.4308531619 347156.19003778463 264240.41946940287 311101.9005246717 270309.097060226 281472.79751767195 282960.7807078591 0.997833538243332 0.9980128271233188 0.9826379961746211 0.9826924782917057 1.2268703428416239 0.9338411450815726 1.0994523684392388 0.9552882077297659 0.9947413801076432 1.0 18.110242579086595 EPEGPPPS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 1 EPEGPPPSPGK 11 0 P58012 P58012 FOXL2 Forkhead box protein L2 1 EPEGPPPS(1)PGK 71.502 0.02235 320360000.0 471040.0 491610.0 388290.0 364560.0 371290.0 507590.0 394350.0 520240.0 538580.0 542370.0 True False 444910.4722050394 467992.31767834607 413319.79468596587 399207.67279103975 400508.4106488803 504421.9425290491 434214.7464851139 518435.4088649292 440787.4484969402 537565.0237574748 0.8276402900903073 0.8705780640399015 0.7688740457795059 0.742622111090219 0.7450417957801727 0.9383459120968064 0.8077436724771218 0.9644143237615548 0.819970476159185 1.0 19.036079747796833 -6.263338423275556 24.98782158809829 0.8977238224912076 0.7914635075203899 0.4308561963542913 0.06581703658412752 182.68917944439826 2403829.2666082927 0.022406506389774514 0.020763104193702555 5.453327458137131e-07 6.263338423275556 -0.10626031497081778 EPFFHGHDNYDQLVR ddPTM_KYSE-520_SHP099_60min_R1 4 EPFFHGHDNYDQLVR 15 0 P68400;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8Y5A0;A0A2R8YDP2;P68400-2;A0A2R8YF43 P68400 CSNK2A1 Casein kinase II subunit alpha 0 ;;; 254.18 1.6966999999999998e-19 3736430000.0 1684030.0 1378030.0 893400.0 816110.0 1548790.0 1380740.0 1237280.0 1183760.0 988140.0 1019440.0 False True 1590613.498869423 1311827.3703348003 950989.9934905418 893672.8490275823 1670670.9615903448 1372122.2895005029 1362356.337089141 1179653.8128516602 808718.6849822988 1010408.5547123178 1.5742280599774816 1.2983138001125714 0.9411935291475303 0.8844668276606463 1.6534608241376343 1.3579876012541994 1.348322251168023 1.167501806422779 0.800387804725739 1.0 19.94650732831761 -7.605406374048536 4.788065647460318 0.9064673179331025 1.2799662313196736 0.3119118652627596 0.23010809361611043 0.2846868058093742 11.483862826089203 0.18023152547661125 0.06362299059693759 2.4808106974862223e-08 7.605406374048536 0.37349891338657104 EPFPPS(ph)SPLQK ddPTM_KYSE-520_SHP099_60min_R1 3 EPFPPSSPLQK 11 0 E7EPJ7;O75962-4;O75962;O75962-5 E7EPJ7 TRIO Triple functional domain protein 1 EPFPPS(0.666)S(0.334)PLQK;EPFPPS(0.693)S(0.307)PLQK;EPFPPS(0.745)S(0.255)PLQK 157.03 2.9275e-05 1323440000.0 1057680.0 988430.0 902870.0 1033300.0 1188210.0 1934170.0 1787010.0 2167470.0 2214870.0 2328700.0 True False 999008.3819671939 940944.3391363217 961070.4448430777 1131504.5213270255 1281715.3670098996 1922098.1275860695 1967658.4103369194 2159951.552461304 1812705.440329049 2308069.5297011863 0.43283288008075316 0.4076759070850612 0.41639579418021366 0.4902384901175466 0.555319218297482 0.8327730611455685 0.8525126236520534 0.935826033256867 0.7853773107795979 1.0 21.138255254591876 -6.165903364359111 1.6026658053518674 0.896068939311866 0.42226760916860817 0.940450726018188 0.0538806565709523 0.07966693365833998 0.40840336722285714 0.02135841009896284 0.02086718087334482 6.824905394363285e-07 6.165903364359111 -0.47380133014325787 EPFPPSS(ph)PLQK ddPTM_KYSE-520_SHP099_60min_R1 5 EPFPPSSPLQK 11 0 E7EPJ7;O75962-4;O75962;O75962-5 E7EPJ7 TRIO Triple functional domain protein 1 EPFPPS(0.479)S(0.521)PLQK;EPFPPS(0.399)S(0.601)PLQK;EPFPPS(0.184)S(0.816)PLQK;EPFPPS(0.19)S(0.81)PLQK;EPFPPS(0.182)S(0.818)PLQK 189.24 8.6275e-07 2641310000.0 2548330.0 2658950.0 2114700.0 2586520.0 3142040.0 5245360.0 4721930.0 5925950.0 6038780.0 6452220.0 True False 2406969.0549300867 2531210.0508346804 2251016.9456396312 2832342.0831344076 3389300.6722378954 5212621.762572505 5199268.765995837 5905394.262577122 4942289.7772556655 6395058.350551197 0.3763795297853111 0.39580718612466026 0.35199318321241174 0.44289542454140157 0.529987450692419 0.8151015169585157 0.8130134990164251 0.9234308647188699 0.7728295046486454 1.0 22.60852609210064 -6.159356464968772 1.5540896813828895 0.8800772805169523 0.37711077305037916 0.9378829581904795 0.05851146671813316 0.08247845185927659 0.3988841956232203 0.023165698145593005 0.022744034262562125 6.928568819248361e-07 6.159356464968772 -0.5029665074665732 down EPGEPPLFSRPS(ph)TPK ddPTM_KYSE-520_SHP099_60min_R1 1 EPGEPPLFSRPSTPK 15 1 Q15772-1;Q15772;B9ZVR7 Q15772-1 SPEG Striated muscle preferentially expressed protein kinase 1 EPGEPPLFS(0.114)RPS(0.504)T(0.382)PK 70.942 0.013465000000000001 438850000.0 444450.0 405930.0 313410.0 277460.0 309380.0 381200.0 291420.0 367220.0 438450.0 367250.0 True False 419795.47251089074 386428.51348664745 333612.9100737304 303829.71497860935 333726.44586859486 378820.7894010401 320879.57758511987 365946.1995297926 358838.53242505045 363996.45071617665 1.1532955106703031 1.061627146985458 0.9165279205809136 0.8347051581981445 0.9168398351466768 1.0407266022943247 0.8815458968178873 1.0053565050147597 0.9858297566336764 1.0 18.47356485739063 -4.563677522086683 3.515600433947918 0.9440436029755757 1.1411248048815812 0.5526835794890401 0.05992521289825872 0.16865571020695433 4.181632013905225 0.01637937169748728 0.05949176924729504 2.7310048909245832e-05 4.563677522086683 0.19708120190600553 EPGEPPLFSRPST(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 EPGEPPLFSRPSTPK 15 1 Q15772-1;Q15772;B9ZVR7 Q15772-1 SPEG Striated muscle preferentially expressed protein kinase 1 EPGEPPLFSRPS(0.205)T(0.795)PK;EPGEPPLFS(0.025)RPS(0.124)T(0.851)PK 99.891 0.0034138000000000007 1030560000.0 630350.0 682550.0 517780.0 440700.0 512700.0 669490.0 500040.0 586270.0 720830.0 656510.0 True False 595383.2289284287 649759.2734715628 551156.9272772917 482583.9954987133 553046.5731360421 665311.4645752935 550588.9231201131 584236.3662064465 589945.4426455676 650693.8321570517 0.9149974988309507 0.9985637505086058 0.8470295860192882 0.7416452587216728 0.8499336336148928 1.0224646856875597 0.8461566652551622 0.8978667651877098 0.9066405942252396 1.0 19.311619353112665 EPGEQASVPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 EPGEQASVPLSPK 13 0 P42858 P42858 HTT Huntingtin 1 EPGEQASVPLS(1)PK;EPGEQASVPLS(1)PK 162.64 1.0116e-06 740190000.0 881730.0 959770.0 737300.0 636510.0 705790.0 890890.0 701630.0 790800.0 989200.0 847800.0 True False 832818.6792148215 913661.2085558589 784827.5377217112 697003.7190262912 761331.6576042254 885329.6250511346 772557.6076489172 788056.8993741075 809586.2157027246 840289.1515784198 0.9911096408307003 1.087317629698795 0.9339969893071591 0.829480801599095 0.9060353286414817 1.053601160253122 0.9193949561263834 0.937840144542866 0.9634614634521675 1.0 19.680526333002085 -4.777553778175116 24.985425619435137 0.9384923003500477 1.0392136287899454 0.29161049392568306 0.05967160520233059 253.84945246941552 393595.40541055636 0.016244931157378732 0.03398403534470361 1.6689611289204774e-05 4.777553778175116 0.10072132843989767 EPGS(ph)PPSVQR ddPTM_KYSE-520_SHP099_60min_R1 3 EPGSPPSVQR 10 0 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 EPGS(0.94)PPS(0.06)VQR;EPGS(1)PPSVQR;EPGS(0.994)PPS(0.006)VQR 105.94 0.001239 862120000.0 1040430.0 940220.0 1207540.0 698200.0 863180.0 1105110.0 883640.0 926770.0 997940.0 1100350.0 True False 982715.2738542143 895050.4199010081 1285379.9605323134 764556.7180785147 931107.3551776258 1098212.5985702595 972966.9546953376 923555.2511797437 816739.2520201943 1090601.7550593454 0.9010761896314201 0.8206940945664476 1.1785970035069027 0.7010411587288442 0.8537555994735763 1.006978572586746 0.89213771221411 0.8468308866140493 0.7488886279811197 1.0 20.056692951564067 -5.292825069195961 24.999125720381993 0.8645250586414204 0.9521799384172005 0.12429161598708671 0.12292339768214908 1613.078444160096 1284835.5940119175 0.03468822338250354 0.051457085285431074 5.095360673212014e-06 5.292825069195961 0.08765487977578013 EPIIEDILNLESSPTASGSSVS(ph)PGLYSK ddPTM_KYSE-520_SHP099_60min_R1 1 EPIIEDILNLESSPTASGSSVSPGLYSK 28 0 Q9BQL6-2;Q9BQL6;Q9BQL6-4 Q9BQL6-2 FERMT1 Fermitin family homolog 1 1 EPIIEDILNLESSPTASGS(0.001)S(0.018)VS(0.98)PGLYSK 175.48 1.2837000000000002e-10 104960000.0 24037.0 33874.0 21975.0 30866.0 27381.0 40823.0 35303.0 52653.0 50511.0 51135.0 True False 22703.619693428467 32246.642194089403 23391.54366124315 33799.495359798726 29535.728923421026 40568.20851447704 38871.77176407758 52470.35903230261 41339.4756786902 50681.983682428014 0.44796233382830386 0.6362545396041722 0.46153567721054395 0.6668936948400733 0.5827658425623419 0.8004463433924839 0.7669741580686165 1.0352862145467807 0.815664121154418 1.0 15.629185371920729 -6.498338034982103 0.751763117661057 0.9714037031817702 0.5179788243557826 0.7919618813900089 0.08715096548950294 0.2775599791337556 0.3281405644683464 0.06182988442345784 0.04815381793856262 3.174402299104136e-07 6.498338034982103 -0.4534248788259876 EPIPEEQEMDFRPVDEGEECS(ph)DS(ph)EGS(ph)HNEEAKEPDKTNK ddPTM_KYSE-520_SHP099_60min_R1 1 EPIPEEQEMDFRPVDEGEECSDSEGSHNEEAKEPDKTNK 39 3 I1E4Y6;Q6Y7W6;Q6Y7W6-3;C9J7G1;B8ZZD2;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 3 EPIPEEQEMDFRPVDEGEECS(1)DS(0.998)EGS(0.984)HNEEAKEPDKT(0.018)NK 53.745 0.031585 242120000.0 120630.0 97765.0 85621.0 112320.0 106350.0 89401.0 105000.0 117430.0 115630.0 106780.0 True False 113938.41343005674 93068.22265174333 91140.26665844372 122994.85902976058 114719.13995127374 88843.01519738283 115614.42470124767 117022.66273836818 94634.50679509308 105834.01227358302 1.0765765275488535 0.8793791395828415 0.8611623494235892 1.1621486929156237 1.0839534237322732 0.8394561756547779 1.092412752928445 1.1057188537448837 0.8941785798544707 1.0 16.69144382072414 -5.233397378353226 24.998224970874265 1.0272978168203266 0.9330733375042068 0.11975327081534126 0.10685609888308417 1530.628980514366 1364487.750383619 0.02920581823229822 0.05057322040495731 5.842552474200342e-06 5.233397378353226 -0.09422447931611977 EPLATLVDQS(ph)PESLKR ddPTM_KYSE-520_SHP099_60min_R1 3 EPLATLVDQSPESLKR 16 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2;A0A5F9ZH08 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 EPLATLVDQS(0.999)PES(0.001)LKR;EPLATLVDQS(1)PESLKR;EPLATLVDQS(0.999)PES(0.001)LKR 176.1 1.3514999999999999e-08 1346610000.0 881780.0 723390.0 599575.0 701700.0 706740.0 788220.0 671003.0 811220.0 808100.0 763160.0 True False 832865.9056151488 688637.2585694739 638224.563853919 768389.3570262027 762356.417199465 783300.4266046373 738834.5315982018 808406.0671601713 661369.4105432383 756398.9961294953 1.101093351362093 0.9104153523381717 0.8437670688614388 1.0158518995372314 1.0078760298472815 1.0355651324404143 0.9767788368028367 1.0687561343904433 0.8743657962629183 1.0 19.528787923023323 EPLIPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 EPLIPASPK 9 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 EPLIPAS(1)PK;EPLIPAS(1)PK;EPLIPAS(1)PK;EPLIPAS(1)PK;EPLIPAS(1)PK;EPLIPAS(1)PK;EPLIPAS(1)PK;EPLIPAS(1)PK;EPLIPAS(1)PK;EPLIPAS(1)PK 147.28 0.00031671 10642670000.0 13557010.0 14265900.0 12095600.0 10665940.0 12522880.0 16056960.0 14497630.0 17869270.0 21408380.0 18239020.0 True False 12804975.63007058 13580544.750447545 12875301.729644274 11679627.730768193 13508359.410559537 15956742.556613114 15963191.923633795 17807285.673088953 17521157.853341985 18077436.47254282 0.7083402367099786 0.7512428419303011 0.712230506200374 0.646088716644529 0.7472497237690149 0.8826883491389528 0.8830451125014172 0.9850559121109794 0.9692280141575524 1.0 24.107686770583662 -6.519529774963443 1.3433069424085007 0.978279173527018 0.7048422252566329 0.9241102205797833 0.03412397192480981 0.11601374500716237 0.4259730319071785 0.01972496500507287 0.01428243417395592 3.023223293070368e-07 6.519529774963443 -0.2734369482703851 EPNEDCKPR ddPTM_KYSE-520_SHP099_60min_R1 1 EPNEDCKPR 9 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28 O60716-5 CTNND1 Catenin delta-1 0 79.148 0.049194999999999996 0.0 135930.0 149500.0 89738.0 101430.0 152280.0 126980.0 106460.0 126940.0 116800.0 97841.0 False True 128389.69193026308 142317.79559592504 95522.65506587672 111069.87670395861 164263.56964532175 126187.47071916067 117222.01574947455 126499.67476801873 95592.06428839295 96974.20485914605 1.323957150427247 1.4675840426084448 0.9850315886025806 1.145354858699655 1.6938893171015195 1.301247799891183 1.2087958433867874 1.3044672544802827 0.9857473379363034 1.0 16.565313420963832 -7.760775547756995 24.256249970937926 0.9928734726264528 1.3030962658526466 0.3291322049735974 0.17755493467251962 14.383164701400977 525819.3679257714 0.1441177551701777 0.04699753196390162 1.7347002946027088e-08 7.760775547756995 0.31022279322619384 EPPGLIFNKVEVS(ph)EDEPASK ddPTM_KYSE-520_SHP099_60min_R1 1 EPPGLIFNKVEVSEDEPASK 20 1 O75683 O75683 SURF6 Surfeit locus protein 6 1 EPPGLIFNKVEVS(0.998)EDEPAS(0.002)K 55.994 0.031029 369380000.0 159050.0 174290.0 169230.0 106130.0 108990.0 123820.0 102900.0 98087.0 180990.0 110160.0 True False 150227.1794416857 165916.84678537634 180138.8365775736 116216.5632908521 117566.89293172855 123047.193451303 113302.13620722276 97746.7590906779 148126.77838661146 109184.06810318303 1.3759075115218768 1.5196067491145202 1.6498637549146424 1.0644095362065378 1.076776996627598 1.126970221836933 1.037716749115338 0.8952474549519766 1.3566702629785337 1.0 16.73640283119459 -5.271478093058206 24.898954870456834 1.0754201920377955 1.5155740786850622 0.7145548161961042 0.12609948812532124 317.51690709938816 787534.5388747558 0.034411122336973306 0.051724233945920885 5.352071503293141e-06 5.271478093058206 0.44015388664726673 EPPPPYVTPATFET(ph)PEVHAGTGVVGNKPR ddPTM_KYSE-520_SHP099_60min_R1 2 EPPPPYVTPATFETPEVHAGTGVVGNKPR 29 1 Q96DF8;F8WEF8 Q96DF8 DGCR14 Protein DGCR14 1 EPPPPYVTPATFET(0.999)PEVHAGT(0.001)GVVGNKPR;EPPPPYVTPATFET(0.997)PEVHAGT(0.003)GVVGNKPR 190.23 4.5268e-15 4220700000.0 823830.0 826840.0 588250.0 632240.0 595490.0 801050.0 617930.0 839530.0 841340.0 873860.0 True False 778130.5076356112 787117.3652878572 626169.5362332779 692327.8995101122 642351.6751253788 796050.3498155896 680396.394815638 836617.8663777749 688573.8644554499 866118.2802527915 0.8984113664111795 0.9087873830097704 0.7229607670334813 0.7993456728658868 0.7416442878193235 0.9191011989531599 0.785569835354419 0.9659395090167057 0.7950113513993468 1.0 19.72420453250872 -7.254380233951372 24.98344918530289 0.9103565736657081 0.8238192633532576 0.22288545531169457 0.08079559418563494 899.6721439277716 3184095.3861934766 0.038704795778049896 0.02173721822832671 5.566981345815385e-08 7.254380233951372 -0.08653731031245049 EPPS(ph)PSETGPNSLGTFK ddPTM_KYSE-520_SHP099_60min_R1 6 EPPSPSETGPNSLGTFK 17 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 EPPS(0.999)PS(0.001)ETGPNSLGTFK;EPPS(0.97)PS(0.027)ET(0.002)GPNSLGTFK;EPPS(1)PSETGPNSLGTFK;EPPS(1)PSETGPNSLGTFK;EPPS(0.996)PS(0.004)ETGPNSLGTFK;EPPS(0.992)PS(0.008)ETGPNSLGTFK 272.43 8.0463e-30 5469220000.0 4623080.0 4622330.0 3253270.0 3652130.0 3527610.0 5713970.0 4439520.0 6377980.0 5303780.0 6484670.0 True False 4366628.536518505 4400266.328541224 3462980.9896160397 3999227.3371470766 3805212.837644688 5678306.993740442 4888310.007139837 6355856.276011726 4340747.249413459 6427220.868796919 0.6793960602346428 0.6846297051815631 0.5387991264510968 0.6222327532826288 0.5920463782594371 0.8834778062953573 0.7605635634636059 0.988896508422224 0.6753692362568493 1.0 22.615763620171222 -6.261615448228098 24.999997875865628 0.8546488448773497 0.6220540864667626 0.5960061028429808 0.09798439750533341 11.175238157123664 1586687.5803319113 0.0314949328338548 0.02955475754292085 5.475005398924837e-07 6.261615448228098 -0.23259475841058708 EPPS(ph)SPLQPQK ddPTM_KYSE-520_SHP099_60min_R1 1 EPPSSPLQPQK 11 0 H0Y4V9;Q92615;A0A087X183 H0Y4V9 LARP4B La-related protein 4B 1 EPPS(0.513)S(0.487)PLQPQK 116.77 0.00025553 771700000.0 668230.0 699030.0 561150.0 459450.0 497860.0 773350.0 622130.0 875610.0 906500.0 1002900.0 True False 631161.9498165197 665447.5495345792 597322.6268717456 503115.98986132065 537038.7495640909 768523.2357903839 685020.9718036867 872572.7132789105 741902.4510053783 994015.0862443921 0.6349621434833435 0.6694541750354982 0.6009190757139934 0.506145225383051 0.5402722322788294 0.7731504747015802 0.6891454478742841 0.8778264287473567 0.7463694075393253 1.0 19.922908222285546 -7.46816869496097 0.6331918188627638 0.9765315211604572 0.591197395903491 0.7174784742519605 0.07650443778963063 0.396628647809354 0.34223511989846134 0.0774843047280019 0.0384290610925818 3.4027598909252496e-08 7.46816869496097 -0.3853341252569662 EPPSS(ph)PLQPQK ddPTM_KYSE-520_SHP099_60min_R1 4 EPPSSPLQPQK 11 0 H0Y4V9;Q92615;A0A087X183 H0Y4V9 LARP4B La-related protein 4B 1 EPPS(0.018)S(0.982)PLQPQK;EPPS(0.03)S(0.97)PLQPQK;EPPS(0.015)S(0.985)PLQPQK;EPPS(0.038)S(0.962)PLQPQK 204.48 1.5266e-07 1778420000.0 3118970.0 3224520.0 2327860.0 2127980.0 2353800.0 3472510.0 2949450.0 4060300.0 4001260.0 4148570.0 True False 2945954.5165874497 3069609.2190968078 2477917.5803076937 2330222.5793994833 2539030.6687099943 3450836.777027815 3247609.189858048 4046215.766981145 3274732.047556291 4111816.8973386195 0.7164605307435319 0.7465335387584057 0.6026332500144961 0.5667136055858236 0.617496044231295 0.8392486492434464 0.7898233970389267 0.9840457072881978 0.7964197164703192 1.0 21.97134459086396 -6.519434226166974 1.9371819112528605 0.901134906402444 0.648618563287724 0.6724951225056142 0.08102335942768506 0.21263766644086307 1.6042275440377725 0.037597320713949965 0.02870743943910261 3.0238885032860157e-07 6.519434226166974 -0.25251634311471993 EPPTIRPNS(ph)PYDLCSR ddPTM_KYSE-520_SHP099_60min_R1 1 EPPTIRPNSPYDLCSR 16 1 Q96RU2-2;Q96RU2;G3V1N5;B4E3L3 Q96RU2-2 USP28 Ubiquitin carboxyl-terminal hydrolase 28;Ubiquitin carboxyl-terminal hydrolase 1 EPPTIRPNS(0.999)PY(0.001)DLCSR 147.49 6.6627e-06 639890000.0 273220.0 241290.0 246900.0 213550.0 244230.0 232310.0 218240.0 196850.0 281490.0 282310.0 True False 258063.94194943315 229698.06621632623 262815.5690539677 233845.7277938515 263449.51152138767 230860.06711898092 240301.82901714553 196167.1732951356 230378.51178544288 279808.9530338563 0.922286221192529 0.8209103523164724 0.9392679047770411 0.835733543399366 0.9415335308785163 0.825063189064745 0.8588067908894592 0.7010753986538801 0.8233421743212326 1.0 18.094082599523105 -6.363342004208499 11.424988219620726 0.8239276771687732 0.8874939103881692 0.07060983712925128 0.07825305145314193 1.2683491714381625 136.26781189903414 0.026280101033094427 0.02317049250389271 4.331696256467774e-07 6.363342004208499 0.06356623321939592 EPS(ph)EQEHRR ddPTM_KYSE-520_SHP099_60min_R1 2 EPSEQEHRR 9 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 EPS(1)EQEHRR;EPS(1)EQEHRR 69.86399999999999 0.015378 322760000.0 173429.0 149290.0 133602.0 121587.0 141119.0 142389.0 138600.0 124314.0 198118.0 112410.0 True False 163808.54764785967 142117.88431114162 142214.19869075826 133142.59192353534 152224.26244272478 141500.29743448217 152611.04060564676 123882.78374910567 162144.76534835485 111414.13485365671 1.4702671960162272 1.2755821736426398 1.2764466454598213 1.1950242408507603 1.3662921912257586 1.2700390091467646 1.3697637270719958 1.1119126304021174 1.4553338816599275 1.0 16.765572750109897 -10.306435493372787 3.277993732711484 0.9984034910409484 1.3010895799029307 0.4367885052834186 0.10518541071680865 25080910.885316208 37486443.85288093 399510.83985001815 0.024087728133432032 4.938152601700807e-11 10.306435493372787 0.30268608886198234 EPS(ph)PALGPNLDGSGLLPR ddPTM_KYSE-520_SHP099_60min_R1 8 EPSPALGPNLDGSGLLPR 18 0 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 EPS(1)PALGPNLDGSGLLPR;EPS(1)PALGPNLDGSGLLPR;EPS(1)PALGPNLDGSGLLPR;EPS(1)PALGPNLDGSGLLPR;EPS(1)PALGPNLDGSGLLPR;EPS(1)PALGPNLDGSGLLPR;EPS(1)PALGPNLDGSGLLPR;EPS(1)PALGPNLDGSGLLPR 233.37 1.9024000000000002e-23 6197950000.0 963754.0 997048.0 641829.0 643883.0 699507.0 1020759.0 723868.0 1004445.0 1005834.0 1036743.0 True False 910292.6444240317 949148.3174804399 683202.3243027092 705077.4467295167 754554.2212496058 1014388.0644496736 797043.6417108827 1000960.8147342242 823199.9006117412 1027558.2635938483 0.8858793478438056 0.9236929438539354 0.6648794024712852 0.6861678521892604 0.7343177004976627 0.9871830147147935 0.7756675898097019 0.9741158727422419 0.8011223594588486 1.0 19.970788767819762 -6.246775126341955 24.70655763467462 0.897753127876264 0.7755306609686022 0.28072826106681215 0.10226563800384159 1040.3133720173932 1752736.9488889808 0.03503369115548549 0.034882253136860095 5.665325584142069e-07 6.246775126341955 -0.12222246690766181 EPS(ph)PALGPNLDGSGLLPRPIFYCSFPTR ddPTM_KYSE-520_SHP099_60min_R1 1 EPSPALGPNLDGSGLLPRPIFYCSFPTR 28 1 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 1 EPS(1)PALGPNLDGSGLLPRPIFYCSFPTR 101.85 0.0015035 178140000.0 0.0 0.0 5516.9 0.0 0.0 0.0 5808.4 5431.7 7819.8 0.0 True False 0.0 0.0 5872.528201352099 0.0 0.0 0.0 6395.56975652121 5412.858700468312 6399.921441116225 0.0 0.0 EPS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 3 EPSPEK 6 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 EPS(1)PEK;EPS(1)PEK;EPS(1)PEK 116.25 0.0084993 3669700000.0 9636000.0 7306000.0 6620600.0 7308300.0 8315700.0 10440200.0 12756800.0 6457500.0 9596900.0 10154900.0 True False 9101471.87111024 6955008.793470421 7047374.469334538 8002878.634679479 8970098.280139228 10375038.839204442 14046381.838370256 6435100.439691833 7854344.878161633 10064935.486392654 0.9042752319093377 0.6910137479642352 0.7001907244077495 0.7951246826667707 0.8912226305142643 1.0308102673118007 1.39557594356768 0.6393583394937606 0.780367135862953 1.0 23.26283458920207 -5.852654719715605 2.9779727668423783 0.9720617433154489 0.7582208967170659 0.19072078488169097 0.19012978660514424 0.45304558660471866 8.095918779969486 0.06659103060372995 0.07879809182508943 1.4039294371576197e-06 5.852654719715605 -0.21384084659838298 EPS(ph)PEKNSK ddPTM_KYSE-520_SHP099_60min_R1 9 EPSPEKNSK 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 EPS(1)PEKNSK;EPS(0.996)PEKNS(0.004)K;EPS(0.996)PEKNS(0.004)K;EPS(1)PEKNSK;EPS(0.998)PEKNS(0.002)K;EPS(1)PEKNSK;EPS(1)PEKNSK;EPS(0.795)PEKNS(0.205)K;EPS(0.985)PEKNS(0.015)K 168.71 0.00014598 12105430000.0 13575720.0 12908510.0 13241670.0 8405430.0 9711610.0 10281960.0 8113290.0 6773460.0 16268310.0 9553800.0 True False 12822647.74907311 12288365.803531485 14095249.235621117 9204279.540015316 10475858.455497788 10217786.4737406 8933460.531279858 6749964.44819745 13314394.994721802 9469160.764743932 1.3541482785692112 1.2977249102459179 1.4885426053913116 0.9720269587443445 1.1063132959472022 1.079059351466921 0.9434268519910846 0.712836608850202 1.406079728236809 1.0 23.17480513713037 -5.268276827368253 24.84944848591199 1.0208693438553416 1.371897233233248 0.474128478917507 0.1679878374142592 406.1918224347939 1476230.1414695953 0.04592190870715181 0.06986345266888037 5.391668380037859e-06 5.268276827368253 0.3510278893779064 EPS(ph)PGSHSALPGKK ddPTM_KYSE-520_SHP099_60min_R1 1 EPSPGSHSALPGKK 14 1 Q9P209 Q9P209 CEP72 Centrosomal protein of 72 kDa 1 EPS(0.938)PGS(0.062)HSALPGKK 139.49 4.0266000000000005e-06 686420000.0 472530.0 371450.0 338090.0 412610.0 433370.0 392630.0 398810.0 422890.0 431560.0 356180.0 True False 446317.8189347981 353604.9844421833 359883.82236312603 451824.3303442795 467473.7534619981 390179.4505312968 439125.6068105194 421423.0932932684 353199.58274228487 353024.52230384666 1.2642686010085564 1.0016442544403106 1.0194300951517912 1.2798666998985306 1.324196263792818 1.1052474428262835 1.2438954776987585 1.193750197700293 1.00049588747347 1.0 18.42940887599949 -7.7651100629136725 24.759696327167738 1.0002478015995342 1.175705918672647 0.3263256906849319 0.10266534643474398 111.37501874831997 751191.667323351 0.09262908335322849 0.027554721728772102 1.7174730741304402e-08 7.7651100629136725 0.17545811707311287 EPS(ph)PKQDVVGK ddPTM_KYSE-520_SHP099_60min_R1 1 EPSPKQDVVGK 11 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 EPS(1)PKQDVVGK 83.69200000000001 0.0039794 0.0 249040.0 268920.0 281510.0 138570.0 180400.0 180570.0 133280.0 129810.0 308140.0 146700.0 True False 235225.25475106816 256000.67954285088 299656.5850319254 151739.65113741028 194596.4536644078 179442.99565095932 146753.24308745016 129359.71940788168 252189.5435772724 145400.35213087295 1.6177763760801966 1.7606606572206098 2.0609068729228968 1.0435989247180875 1.3383492599058775 1.2341304062967127 1.0093045920229924 0.8896795469342927 1.734449331665166 1.0 17.149671237620378 -5.268163835716637 24.995740749045936 1.1758333204078044 1.8078692440521744 0.5840313841357483 0.24541251928884433 356.0647257521205 1323542.1209167743 0.06755202882605096 0.10282320871659426 5.39307132849314e-06 5.268163835716637 0.63203592364437 EPS(ph)PPRK ddPTM_KYSE-520_SHP099_60min_R1 4 EPSPPRK 7 1 O60293-2;O60293;G3V1X1;O60293-4 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 EPS(1)PPRK;EPS(1)PPRK;EPS(1)PPRK;EPS(1)PPRK 74.92 0.014237999999999999 1163670000.0 1440550.0 1320510.0 1225080.0 1149720.0 1278270.0 1217690.0 1285100.0 1364940.0 1545780.0 1307060.0 True False 1360639.8198347692 1257070.7174740792 1304050.6169973048 1258989.0431240778 1378862.5766385964 1210089.9450308278 1415010.449367365 1360205.3417193915 1265105.3179427378 1295480.4652772928 1.0502974427665563 0.9703509633431701 1.0066154233504228 0.9718317464976949 1.0643638507844702 0.9340858295163968 1.092266913545846 1.0499620628615536 0.9765529869815109 1.0 20.305055830415274 -6.769622179749758 24.999998118553304 1.0338589660155106 1.0002635320994537 0.09167736498827528 0.04564692633249221 421.53849152243646 1287866.36343634 0.018033237933813638 0.012397484978692613 1.6997217049056037e-07 6.769622179749758 -0.033595433916056905 EPSAPSIPTPAYQSS(ph)PAGGHAPTPPTPAPR ddPTM_KYSE-520_SHP099_60min_R1 1 EPSAPSIPTPAYQSSPAGGHAPTPPTPAPR 30 0 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 1 EPSAPSIPTPAYQS(0.319)S(0.681)PAGGHAPTPPTPAPR 164.25 3.3091e-10 855310000.0 165050.0 188040.0 94857.0 183020.0 126500.0 144000.0 148240.0 108670.0 209340.0 171490.0 True False 155894.347480982 179006.27614620558 100971.63399656629 200414.16577303034 136454.83031345674 143101.24258591232 163225.5458829806 108293.04913376858 171329.13303195356 169970.73201720123 0.9171834799488027 1.0531594117514889 0.5940530631258789 1.1791098584710937 0.8028136885334315 0.8419169635124611 0.9603156022559343 0.6371276269070207 1.0079919701388051 1.0 17.37492681839471 EPSAT(ph)PPISNLTK ddPTM_KYSE-520_SHP099_60min_R1 4 EPSATPPISNLTK 13 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 EPS(0.006)AT(0.992)PPIS(0.002)NLTK;EPSAT(1)PPISNLTK;EPSAT(0.998)PPIS(0.002)NLTK;EPSAT(1)PPISNLTK 147.51 3.6815e-05 3581690000.0 3225050.0 4073630.0 2660930.0 2382900.0 2560420.0 3767540.0 2657510.0 3317220.0 3940580.0 3649550.0 True False 3046150.0475222156 3877926.7001567073 2832457.8054385344 2609370.0995549904 2761910.4872030085 3744025.3853620007 2926157.045598215 3305713.3380649714 3225070.005937974 3617217.826306938 0.8421251342311988 1.0720744191720255 0.7830487245857631 0.7213748866816441 0.7635455258227646 1.0350566554584657 0.8089524010185823 0.9138828505221642 0.8915885525286891 1.0 21.786449048011928 -6.240436162781023 24.995719625807656 0.916954814920914 0.8401669051293623 0.15962871437319825 0.10497226391805412 2040.689109467321 2428604.7093137125 0.03686977434460473 0.036836840327966656 5.748623120082296e-07 6.240436162781023 -0.0767879097915517 EPSEVPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 EPSEVPTPK 9 0 P17096;P17096-3;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 EPSEVPT(1)PK;EPSEVPT(1)PK;EPSEVPT(1)PK;EPS(0.001)EVPT(0.999)PK;EPSEVPT(1)PK;EPS(0.001)EVPT(0.999)PK 155.26 0.0009542999999999999 16021600000.0 18816000.0 20579500.0 14141050.0 12279410.0 12895620.0 19622200.0 14570550.0 18408400.0 17966100.0 22026800.0 True False 17772238.971233916 19590829.929540716 15052604.709479995 13446441.434460755 13910431.927959055 19499730.571314458 16043483.388864417 18344545.55695286 14703909.128524806 21831659.68859109 0.814058080088223 0.8973587079033941 0.6894851295866558 0.6159147598607756 0.6371678620122705 0.8931858983449039 0.7348723650748601 0.8402726049517644 0.6735131152767491 1.0 24.3799184754144 -6.267318390960201 24.915616924601434 0.8125423003931962 0.731372901674712 0.15165653785444344 0.1123042185352843 1170.3764531587426 4960113.7162366295 0.04063897600864732 0.036819736368499334 5.403580291877661e-07 6.267318390960201 -0.08116939871848416 EPSKGDPNTEEIRQS(ph)DEVGDRDHR ddPTM_KYSE-520_SHP099_60min_R1 1 EPSKGDPNTEEIRQSDEVGDRDHR 24 3 P40222 P40222 TXLNA Alpha-taxilin 1 EPSKGDPNT(0.003)EEIRQS(0.997)DEVGDRDHR 78.311 0.0074024 215550000.0 270480.0 247790.0 262280.0 308060.0 220940.0 241310.0 283630.0 278940.0 314760.0 207740.0 True False 255475.93521148764 235885.79645962713 279186.9884628375 337337.92977838335 238326.72102336062 239803.8947806006 312302.0883620466 277972.42224508524 257607.5184538919 205899.58521927433 1.2407792611112674 1.145635122132076 1.3559375953356834 1.6383613858140256 1.1574900491885536 1.1646642926707191 1.516768904752567 1.350038767436352 1.251131798927865 1.0 17.651581398128695 -8.135642758221653 3.9684084639617736 1.0000477193931856 1.3223233104053105 0.2876464108772476 0.15151047863719885 1.0645282613238392 28.79695387184015 0.15270351801618495 0.04011125932263523 7.31740750999224e-09 8.135642758221653 0.3222755910121249 EPSVPASCAVSATYERS(ph)PS(ph)PAHLPDDPK ddPTM_KYSE-520_SHP099_60min_R1 7 EPSVPASCAVSATYERSPSPAHLPDDPK 28 1 H0Y4V9;Q92615;H0Y641 H0Y4V9 LARP4B La-related protein 4B 2 EPS(0.002)VPAS(0.005)CAVS(0.018)AT(0.043)Y(0.116)ERS(0.84)PS(0.976)PAHLPDDPK;EPS(0.006)VPAS(0.151)CAVS(0.184)AT(0.196)Y(0.17)ERS(0.588)PS(0.704)PAHLPDDPK;EPS(0.001)VPAS(0.007)CAVS(0.01)AT(0.003)YERS(0.979)PS(1)PAHLPDDPK;EPS(0.009)VPAS(0.029)CAVS(0.1)AT(0.1)Y(0.047)ERS(0.805)PS(0.911)PAHLPDDPK;EPSVPASCAVS(0.001)AT(0.001)Y(0.001)ERS(0.998)PS(0.999)PAHLPDDPK;EPS(0.002)VPAS(0.018)CAVS(0.073)AT(0.085)Y(0.073)ERS(0.856)PS(0.892)PAHLPDDPK;EPSVPASCAVS(0.007)AT(0.005)YERS(0.988)PS(1)PAHLPDDPK 133.25 1.2102999999999999e-05 7816840000.0 3311720.0 3006320.0 2877900.0 2839630.0 2850080.0 2636580.0 2767100.0 2792250.0 3539730.0 2738260.0 True False 3128012.2898498503 2861891.874621682 3063414.0388028086 3109507.5814341083 3074365.0812630537 2620124.1262303097 3046825.472293544 2782564.336466049 2897004.2613317873 2714001.1467340407 1.1525464142172601 1.0544917705969319 1.1287445631661734 1.1457281752353015 1.1327795807907692 0.965410102859868 1.1226323452221145 1.0252627710988682 1.067429269445213 1.0 21.371989899656167 -6.218252277526177 24.987144327168465 1.0431311000770533 1.1206575770812708 0.4644359657236189 0.046224092633969226 462.8006604086918 267766.75256293657 0.014664483598463642 0.014664414325382801 6.049893401194632e-07 6.218252277526177 0.07752647700421744 EPTGVEENKTDSLFVLPS(ph)RDDATPVRDEPMDAESITFK ddPTM_KYSE-520_SHP099_60min_R1 1 EPTGVEENKTDSLFVLPSRDDATPVRDEPMDAESITFK 38 3 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 EPTGVEENKT(0.004)DS(0.035)LFVLPS(0.867)RDDAT(0.094)PVRDEPMDAESITFK 79.365 0.006791199999999999 873250000.0 351430.0 375050.0 296240.0 299820.0 251360.0 306940.0 250860.0 333670.0 380240.0 295020.0 True False 331935.4773416631 357032.0350384726 315336.1044007587 328314.80265583016 271140.60195723706 305024.2736063884 276219.3769576666 332512.57664916315 311198.00107036426 292406.35232208663 1.1351855891832165 1.2210132652836507 1.078417421155799 1.1228032498219815 0.9272732955492524 1.043152008101394 0.9446421897613564 1.1371592101490988 1.0642655284300342 1.0 18.157615127601396 -5.203615091748427 1.81011463354642 1.0265383186678863 1.1726187351477118 0.42684908366014507 0.06604070267454393 0.34373460091997465 2.1818130190634837 0.020414834147871565 0.045090725370877036 6.2572701894085295e-06 5.203615091748427 0.1460804164798255 EPTGVEENKTDSLFVLPSRDDAT(ph)PVRDEPMDAESITFK ddPTM_KYSE-520_SHP099_60min_R1 5 EPTGVEENKTDSLFVLPSRDDATPVRDEPMDAESITFK 38 3 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 EPTGVEENKTDS(0.001)LFVLPS(0.001)RDDAT(0.997)PVRDEPMDAESITFK;EPTGVEENKTDSLFVLPS(0.001)RDDAT(0.999)PVRDEPMDAESITFK;EPTGVEENKT(0.001)DS(0.048)LFVLPS(0.163)RDDAT(0.788)PVRDEPMDAESITFK;EPTGVEENKTDSLFVLPS(0.002)RDDAT(0.998)PVRDEPMDAESITFK;EPT(0.001)GVEENKT(0.002)DS(0.006)LFVLPS(0.137)RDDAT(0.846)PVRDEPMDAES(0.007)ITFK 124.99 3.3401e-05 2437570000.0 1195056.0 1209695.0 1052549.0 1019922.0 993172.0 1070429.0 870685.0 1089865.0 1375636.0 1040368.0 True False 1128763.861394927 1151579.4364107868 1120397.9926779433 1116855.0802292684 1071328.98602432 1063748.0555555243 958702.3368667219 1086084.512691403 1125855.1793615378 1031151.1489140552 1.094663825554257 1.1167901404401859 1.0865506903210818 1.0831148095072884 1.0389640618182674 1.0316121517934573 0.9297398716729046 1.0532738229843417 1.0918430150101845 1.0 19.975824391657664 -5.753152497466715 1.9082299032850945 1.0193282042321605 1.1012831755106387 0.4496482206146879 0.03925662924621308 0.32854857627737233 2.4664813909693644 0.014420342228435098 0.01899507207275133 1.7654178058646868e-06 5.753152497466715 0.08195497127847817 EPTPS(ph)IAS(ph)DISLPIATQELR ddPTM_KYSE-520_SHP099_60min_R1 6 EPTPSIASDISLPIATQELR 20 0 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6 A0A499FIX8 ESYT2 Extended synaptotagmin-2 2 EPT(0.005)PS(0.995)IAS(1)DISLPIATQELR;EPT(0.006)PS(0.994)IAS(0.988)DIS(0.012)LPIATQELR;EPT(0.004)PS(0.996)IAS(1)DISLPIATQELR;EPT(0.007)PS(0.993)IAS(1)DISLPIATQELR;EPTPS(1)IAS(1)DISLPIATQELR;EPTPS(1)IAS(1)DISLPIATQELR 212.79 1.1269e-18 800579000.0 1069280.0 1201590.0 1000860.0 1338370.0 1177010.0 1165750.0 1128110.0 1218010.0 1663430.0 960064.0 True False 1009964.9068431655 1143863.8127766405 1065377.0370326191 1465568.2824043867 1269633.990729183 1158474.1218369931 1242150.368092614 1213785.0075956718 1361393.0436578894 951558.5798784896 1.0613796440909966 1.2020950017840284 1.1196126644863669 1.540176625375533 1.3342678186889034 1.2174490844115198 1.3053850749275278 1.2755757062803927 1.430698090948572 1.0 19.859932948906415 EPTPSIAS(ph)DIS(ph)LPIATQELR ddPTM_KYSE-520_SHP099_60min_R1 7 EPTPSIASDISLPIATQELR 20 0 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6 A0A499FIX8 ESYT2 Extended synaptotagmin-2 2 EPT(0.159)PS(0.14)IAS(0.747)DIS(0.952)LPIAT(0.002)QELR;EPTPSIAS(1)DIS(1)LPIATQELR;EPTPS(0.001)IAS(0.999)DIS(1)LPIATQELR;EPTPS(0.006)IAS(0.993)DIS(1)LPIATQELR;EPTPSIAS(1)DIS(1)LPIATQELR;EPT(0.003)PS(0.155)IAS(0.843)DIS(0.998)LPIATQELR;EPTPS(0.018)IAS(0.982)DIS(1)LPIATQELR 138.05 2.7716000000000003e-06 917207000.0 1229878.0 1212120.0 1176971.0 1391594.0 1124299.0 1241777.0 1165546.0 1403169.0 1605218.0 1161779.0 True False 1161654.21563899 1153887.9357707861 1252840.4338801843 1523850.6753620084 1212774.9349137475 1234026.6091292114 1283370.7643127642 1398301.7342411056 1313750.8754527862 1151486.5419103855 1.0088300413062021 1.0020854727979855 1.0880200404267397 1.3233768870922697 1.0532254531622063 1.0716813129937992 1.1145338808594105 1.214344834565968 1.1409172644546888 1.0 20.135066118941594 -4.898264174098011 4.768370058180725 1.1384230125392216 1.007498004742372 0.2503715878911684 0.08477036335769007 0.2647457655901145 10.009049139164361 0.022471105210505403 0.04926954022471254 1.2639672633556892e-05 4.898264174098011 -0.13092500779684957 EPTPSIAS(ph)DISLPIATQELR ddPTM_KYSE-520_SHP099_60min_R1 9 EPTPSIASDISLPIATQELR 20 0 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6 A0A499FIX8 ESYT2 Extended synaptotagmin-2 1 EPTPS(0.013)IAS(0.957)DIS(0.03)LPIATQELR;EPTPS(0.002)IAS(0.964)DIS(0.034)LPIATQELR;EPTPS(0.001)IAS(0.999)DISLPIATQELR;EPTPSIAS(1)DISLPIATQELR;EPTPSIAS(1)DISLPIATQELR;EPTPSIAS(1)DISLPIATQELR;EPTPSIAS(1)DISLPIATQELR;EPTPSIAS(1)DISLPIATQELR;EPTPSIAS(1)DISLPIATQELR 294.93 5.0459e-44 2339136000.0 709134.0 877167.0 571241.0 582595.0 591164.0 836293.0 606090.0 839185.0 987618.0 629112.0 True False 669796.9233964186 835026.5806654899 608064.1088779161 637964.6536364268 637685.2435369515 831073.3851798626 667359.4920683727 836274.0631022507 808291.4670237494 623538.5571217298 1.0741868578075084 1.339173930991524 0.9751828526607174 1.0231358531881143 1.0226877492235975 1.33283399348409 1.0702778271626399 1.3411745810275366 1.2962974908157143 1.0 19.25011924772099 -6.24927221754029 24.942391693166527 1.220825259940909 1.091144133952231 0.15964329930623922 0.13737505749680515 1354.498383834317 2776691.1798344143 0.045462472264715545 0.0451550972944983 5.632844761591539e-07 6.24927221754029 -0.1296811259886781 EPTPSIASDIS(ph)LPIATQELR ddPTM_KYSE-520_SHP099_60min_R1 1 EPTPSIASDISLPIATQELR 20 0 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6 A0A499FIX8 ESYT2 Extended synaptotagmin-2 1 EPTPSIASDIS(1)LPIATQELR 152.66 7.708199999999999e-07 45463000.0 88246.0 112780.0 90473.0 92964.0 80421.0 127600.0 94183.0 127710.0 132180.0 94951.0 True False 83350.81846596033 107361.87951376873 96305.0343419182 101799.27060935434 86749.67516710277 126803.60106918315 103703.9367775009 127267.00381773824 108179.44398664181 94109.80801076007 0.8856762140714429 1.140814988183734 1.0233262226069693 1.08170734550553 0.9217920746069764 1.3474004861925233 1.1019461092264038 1.3523245505206762 1.1495023342760733 1.0 16.52205746627704 -6.2537867679593555 24.989700545756225 1.206736945201513 1.0225443969358312 0.3523891978493494 0.12014650314125998 612.7406507865611 2000913.7329069797 0.03722828816832301 0.03653449834794646 5.574593859015716e-07 6.2537867679593555 -0.18419254826568188 EPVAES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 EPVAESPK 8 0 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPVAES(1)PK;EPVAES(1)PK;EPVAES(1)PK;EPVAES(1)PK;EPVAES(1)PK;EPVAES(1)PK 121.61 0.00092891 7231490000.0 15355400.0 14293900.0 14047500.0 10598700.0 12635500.0 13899900.0 12271500.0 12654300.0 15351600.0 13527100.0 True False 14503605.351768985 13607199.588418676 14953024.326794675 11605997.261384645 13629841.963839391 13813145.568193905 13512022.978298672 12610405.186835812 12564136.422343265 13407260.417924535 1.0817724799600907 1.0149127535575304 1.115293047250993 0.8656501701024819 1.0166015680293106 1.0302735337136237 1.0078138677931605 0.9405653947003682 0.9371143716687957 1.0 23.676511137452938 -5.234599425547313 24.99779745599687 0.974554604792579 1.0650847540413795 0.43893075765874145 0.05134199295566724 787.1841155793823 733154.9141282002 0.014101844225195384 0.024417463675965517 5.826403722967473e-06 5.234599425547313 0.09053014924880043 EPVAES(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 6 EPVAESPKK 9 1 A0A0G2JNN3;C9JMY0;A0A087WUE4;Q96PV6-1;Q96PV6 A0A0G2JNN3 LENG8 Leukocyte receptor cluster member 8 1 EPVAES(1)PKK;EPVAES(1)PKK;EPVAES(1)PKK;EPVAES(1)PKK;EPVAES(1)PKK;EPVAES(1)PKK 130.1 0.00061197 10421790000.0 14540370.0 13469200.0 12585050.0 11186640.0 11854290.0 12608090.0 12360610.0 12372650.0 14255840.0 12420800.0 True False 13733786.690591037 12822119.414318608 13396302.459791973 12249814.90221404 12787155.181316268 12529398.23357648 13610141.086728448 12329732.164948229 11667338.81648154 12310761.37523617 1.1155919826548963 1.0415374828165433 1.0881782248447633 0.9950493335737358 1.03869734710628 1.0177598161215367 1.1055482818557476 1.0015409923995617 0.9477349500048865 1.0 23.553416654166302 -1.0000000000000002 0.21176748484065352 0.9913282588018797 1.523763646960062 0.375936755709544 0.04044277066714714 63.196203381362366 0.7899422772381856 0.06974649975490704 11.36696288468002 0.09999999999999995 1.0000000000000002 0.5324353881581823 EPYGHLGPAELLEAS(ph)PAAR ddPTM_KYSE-520_SHP099_60min_R1 3 EPYGHLGPAELLEASPAAR 19 0 Q9H6W3 Q9H6W3 NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 1 EPYGHLGPAELLEAS(1)PAAR;EPYGHLGPAELLEAS(1)PAAR;EPYGHLGPAELLEAS(1)PAAR 234.3 3.7974000000000005e-26 1011900000.0 611430.0 498259.0 488933.0 448104.0 404652.0 485445.0 477752.0 494659.0 588580.0 529556.0 True False 577512.7590445138 474321.88973799365 520450.40350046 490691.6694326197 436495.81024506636 482415.15768832027 526047.834570195 492943.1433832791 481708.70889436884 524864.5458283336 1.1003081911983434 0.9037034288331016 0.99158993998936 0.9348920084861462 0.8316351594223135 0.9191231557219771 1.002254464987712 0.9391816370551823 0.9177771917021813 1.0 19.001585622404328 -4.254543070925011 24.701250616754532 0.9355983531406913 1.1003082813513079 0.4955337406322293 0.049146379573475216 598.4347501118258 2143415.2171913004 0.012600420551640202 0.11935168295783473 5.564894419760736e-05 4.254543070925011 0.16470992821061659 EQAPDIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 EQAPDISPK 9 0 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 EQAPDIS(1)PK;EQAPDIS(1)PK 84.46799999999999 0.013369999999999998 562720000.0 1924270.0 1972790.0 1808500.0 1606920.0 1803440.0 1962680.0 1718470.0 1815240.0 2263800.0 1958330.0 True False 1817526.9071628572 1878014.2071818395 1925078.80370231 1759641.1936618853 1945360.467830043 1950430.186100821 1892189.71825098 1808943.356120203 1852750.9857539714 1940980.719757685 0.9363961674950383 0.967559434292729 0.9918072776851898 0.9065732470962213 1.0022564614000415 1.0048683978397868 0.9748627067698044 0.9319738922218836 0.9545437349760341 1.0 20.888354356799695 EQCCYNCGKPGHLAR ddPTM_KYSE-520_SHP099_60min_R1 1 EQCCYNCGKPGHLAR 15 1 P62633-2;P62633-8;P62633-5;P62633;P62633-4;P62633-6;P62633-7;P62633-3 P62633-2 CNBP Cellular nucleic acid-binding protein 0 82.464 0.014365000000000001 0.0 75109.0 60682.0 40872.0 45041.0 58620.0 59212.0 55841.0 36353.0 56223.0 44790.0 False True 70942.55404392049 57766.74563446102 43506.674517512205 49321.68309792956 63233.06049782478 58842.43594442382 61485.95323564158 36226.89992785398 46014.32046649242 44393.195446092686 1.5980501815884618 1.3012522539542808 0.9800302519412689 1.1110189884353248 1.4243863245800725 1.325483226722822 1.3850310304944118 0.8160462332981828 1.0365174212874197 1.0 15.438050937915323 -7.258122281134235 24.99986001149078 0.9447113644247223 1.2891510739282623 0.4815019476786647 0.16724034501706217 272.1533005233616 2051145.674683921 0.08821775211380656 0.048242087936786096 5.519220167386684e-08 7.258122281134235 0.3444397095035401 EQDLPLAEAVRPKT(ph)PPVVIK ddPTM_KYSE-520_SHP099_60min_R1 6 EQDLPLAEAVRPKTPPVVIK 20 2 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK;EQDLPLAEAVRPKT(1)PPVVIK 134.03 7.6012e-06 12016470000.0 9941770.0 12800250.0 10647930.0 7308270.0 8323420.0 9636130.0 6795980.0 7941330.0 14881780.0 10145940.0 True False 9390280.199672857 12185306.77643305 11334312.605090372 8002845.7834885055 8978425.80021844 9575987.338329077 7482983.980773196 7913783.379750355 12179623.891144846 10056054.865021866 0.9337936522537498 1.2117382949865751 1.1271132424420924 0.7958235999014812 0.8928377898422413 0.9522608485000797 0.7441272030845194 0.7869670050505584 1.2111731742345027 1.0 23.261561090331504 -5.247653405705071 24.71917582323835 0.8969067374567795 1.102967409914807 0.24685635629990066 0.1411213239066804 847.5230564805547 1519662.7249088753 0.03771932499236801 0.06486964082819237 5.653880099816137e-06 5.247653405705071 0.2060606724580275 EQDRVHS(ph)PCPTSGSEK ddPTM_KYSE-520_SHP099_60min_R1 2 EQDRVHSPCPTSGSEK 16 1 Q96LT9-2;Q96LT9;X6RLP6 Q96LT9-2 RNPC3 RNA-binding protein 40 1 EQDRVHS(1)PCPTSGSEK;EQDRVHS(0.993)PCPT(0.004)S(0.003)GSEK 207.43 4.0717e-14 1947580000.0 846510.0 651320.0 649420.0 702430.0 605530.0 539860.0 548390.0 543450.0 841330.0 550240.0 True False 799552.4028241517 620029.609548749 691282.6523087388 769188.7360067205 653181.7660055927 536490.5334891011 603826.61297064 541564.8987921838 688565.6802033694 545365.3016802426 1.466085943423191 1.1369069642649972 1.2675589190931882 1.4104101116020569 1.197695863659043 0.9837269291540939 1.1071966095207761 0.9930314545565148 1.2625769884551394 1.0 19.056863387586418 -6.012399249064291 6.649333367719247 1.072746648277552 1.3039889951644343 0.5291922194493162 0.11121351191256004 0.12721741295362418 27.038207170626947 0.034687949390638545 0.036772838909760165 9.718533833639569e-07 6.012399249064291 0.23124234688688228 EQDVVTGVS(ph)PLLFR ddPTM_KYSE-520_SHP099_60min_R1 6 EQDVVTGVSPLLFR 14 0 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 EQDVVTGVS(1)PLLFR;EQDVVTGVS(1)PLLFR;EQDVVTGVS(1)PLLFR;EQDVVT(0.065)GVS(0.935)PLLFR;EQDVVT(0.267)GVS(0.733)PLLFR;EQDVVT(0.008)GVS(0.992)PLLFR 204.78 1.5937999999999998e-11 708642000.0 935399.0 982838.0 782862.0 608407.0 666225.0 830051.0 624161.0 724788.0 932977.0 762050.0 True False 883510.5527983228 935620.9872100849 833326.5371434877 666229.8183557648 718653.1171982813 824870.3438172158 687257.2851043377 722273.8795947903 763571.8952362326 755298.8298659287 1.1697496644542036 1.2387427998215814 1.1033070676031758 0.8820744743825774 0.9514818357733292 1.0921112428621615 0.9099144046421085 0.9562756501595525 1.010953367121954 1.0 19.52668802625093 -5.023127917703913 4.766566972677539 0.9719914062406305 1.1998345298436568 0.7365032559646977 0.05657691521435446 0.09111797128854775 5.420245237271606 0.015528918298817347 0.030064802858860748 9.481391559364848e-06 5.023127917703913 0.22784312360302628 EQEEKS(ph)GEDGEKDTK ddPTM_KYSE-520_SHP099_60min_R1 2 EQEEKSGEDGEKDTK 15 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 EQEEKS(1)GEDGEKDTK;EQEEKS(1)GEDGEKDTK 150.94 3.7266000000000005e-06 2523300000.0 1511960.0 1189570.0 1082420.0 1323740.0 1225540.0 1304240.0 1386320.0 1514730.0 1287690.0 1371840.0 True False 1428088.5647824658 1132421.2716190272 1152194.5251332351 1449547.8516030551 1321983.0256312534 1296099.754376736 1526462.754779369 1509475.75517064 1053877.9560232942 1359686.564875369 1.0503071823125403 0.8328546452342321 0.847397153798344 1.066089707031799 0.9722704186258018 0.953234214309927 1.122657819980215 1.1101644997933777 0.7750888941966522 1.0 20.374842688876598 -5.2599367325838715 24.999170151217868 1.0065351503823559 0.9024531596517857 0.12487233872058234 0.1072992716425002 250.4495995829311 4166639.73409336 0.029413365735617085 0.04771531730159023 5.49620936039386e-06 5.2599367325838715 -0.10408199073057012 EQEKGEGS(ph)DSKESPK ddPTM_KYSE-520_SHP099_60min_R1 6 EQEKGEGSDSKESPK 15 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBM7;E5RHK4 Q6PKG0 LARP1 La-related protein 1 1 EQEKGEGS(0.992)DS(0.007)KESPK;EQEKGEGS(0.997)DS(0.003)KESPK;EQEKGEGS(0.994)DS(0.006)KESPK;EQEKGEGS(0.992)DS(0.008)KESPK;EQEKGEGS(0.999)DSKESPK;EQEKGEGS(0.931)DS(0.043)KES(0.025)PK 156.29 1.1598e-06 11497210000.0 11452720.0 10128200.0 10034060.0 8722340.0 9982220.0 9178140.0 8930850.0 9485990.0 12645380.0 9566680.0 True False 10817414.791168706 9641626.06926187 10680871.562663652 9551308.57113286 10767763.922937494 9120855.823801825 9833667.474696536 9453085.314736715 10349297.75608869 9481926.657964414 1.1408456510347018 1.0168425064924242 1.126445283532348 1.0073172800920336 1.1356092818850303 0.9619200983948442 1.0370959225292757 0.9969582823968087 1.0914762504934292 1.0 23.176748803287 -6.26113211912667 24.99999975701288 1.018525368483015 1.0795436138877235 0.2890703360146628 0.052847254812096685 40.5162635195383 3296656.6012381744 0.016687465600813193 0.01573375834740411 5.481101959206688e-07 6.26113211912667 0.06101824540470857 EQEKGEGSDS(ph)KESPK ddPTM_KYSE-520_SHP099_60min_R1 2 EQEKGEGSDSKESPK 15 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBM7;E5RHK4 Q6PKG0 LARP1 La-related protein 1 1 EQEKGEGS(0.022)DS(0.565)KES(0.413)PK;EQEKGEGS(0.131)DS(0.435)KES(0.435)PK 87.554 0.0019574 1848900000.0 733320.0 653002.0 549940.0 594693.0 647263.0 587897.0 626972.0 644296.0 677230.0 534956.0 True False 692641.277762823 621630.8037440154 585390.0123351113 651212.4439190305 698198.9156773039 584227.7167536805 690352.4484170538 642061.0875558165 554262.103579009 530216.7060294707 1.3063362015687308 1.172408935205191 1.1040580307603018 1.2282005385979569 1.316818025040683 1.1018659165394304 1.3020194206756708 1.2109408855935393 1.0453501318915475 1.0 19.0162226016887 -7.814438816837074 4.057349015756405 1.005119391805514 1.2157714632607917 0.5357612749190834 0.07316047000791069 0.16504908796343776 5.192514987106209 0.06803647798249696 0.01851414738661305 1.533067168792773e-08 7.814438816837074 0.21065207145527776 EQEKGEGSDSKES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 11 EQEKGEGSDSKESPK 15 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBM7;E5RHK4 Q6PKG0 LARP1 La-related protein 1 1 EQEKGEGSDS(0.022)KES(0.978)PK;EQEKGEGSDSKES(1)PK;EQEKGEGSDS(0.003)KES(0.997)PK;EQEKGEGSDS(0.02)KES(0.979)PK;EQEKGEGS(0.001)DS(0.002)KES(0.997)PK;EQEKGEGSDS(0.001)KES(0.999)PK;EQEKGEGSDS(0.103)KES(0.897)PK;EQEKGEGSDS(0.002)KES(0.998)PK;EQEKGEGS(0.002)DS(0.174)KES(0.824)PK;EQEKGEGSDS(0.003)KES(0.997)PK;EQEKGEGS(0.029)DS(0.247)KES(0.723)PK 171.07 2.2392e-08 14122970000.0 13730830.0 12194760.0 11783160.0 11930580.0 12084710.0 11897850.0 12061370.0 12892840.0 14448260.0 11593100.0 True False 12969153.488169013 11608905.424892064 12542721.347322602 13064458.736140335 13035707.924405813 11823591.10486663 13280650.987227513 12848117.747251485 11824820.194994988 11490394.153295325 1.1286952662498175 1.010313943108971 1.0915832111577721 1.1369896073054713 1.1344874466875714 1.0289978696227533 1.1558046495227285 1.1181616205538762 1.0291048363735853 1.0 23.45392495159951 -7.897897381439798 4.526917111634273 1.0012991708531656 1.0989226855005254 0.3772069922392147 0.04482046656364154 0.21334459039415882 6.953223878661896 0.04361390967302558 0.011443758743422792 1.2650352247606301e-08 7.897897381439798 0.09762351464735985 EQEKGEGSDSKES(ph)PKTK ddPTM_KYSE-520_SHP099_60min_R1 2 EQEKGEGSDSKESPKTK 17 3 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBM7;E5RHK4 Q6PKG0 LARP1 La-related protein 1 1 EQEKGEGSDS(0.002)KES(0.996)PKT(0.002)K;EQEKGEGS(0.001)DS(0.348)KES(0.637)PKT(0.014)K 122.77 5.4455e-05 1539670000.0 1669280.0 1858420.0 2167670.0 1266160.0 1502910.0 1345950.0 1158000.0 1055040.0 2642310.0 1202440.0 True False 1576681.7107728212 1769138.713654709 2307401.4765946288 1386495.4657151164 1621180.4666118377 1337549.4267951963 1275061.9409909016 1051380.312488187 2162533.1112145823 1191787.3170841627 1.3229556047217756 1.4844416350923244 1.9360849402558986 1.1633749124863388 1.3602934377404117 1.1223054714725915 1.069873728905321 0.8821878681009153 1.814529388100433 1.0 20.18469536891207 -5.309986136198934 24.97743059199642 1.1946813310093616 1.571489306472466 0.28111253620388277 0.27771634016098556 472.9299415568254 243322.62411674802 0.07672273705458432 0.11379851843401226 4.897944546223634e-06 5.309986136198934 0.3768079754631044 EQFAWR ddPTM_KYSE-520_SHP099_60min_R1 4 EQFAWR 6 0 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;A0A2R8Y6L3;S4R435;Q9NQ39 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 0 ;;; 160.77 0.047484 4219530000.0 3778610.0 3404910.0 2224600.0 1799460.0 3112850.0 3096700.0 2261080.0 2166380.0 2006420.0 2616550.0 False True 3569002.9708277094 3241333.0127258906 2368001.2754858504 1970480.1373726232 3357813.5853062747 3077372.3466374623 2489652.032414258 2158865.3334168917 1642104.7057321668 2593369.4026450985 1.3762030843687432 1.249853958105584 0.9130983318730511 0.7598146779100727 1.2947687212941912 1.1866309302094435 0.9600067116836289 0.8324557740270107 0.6331935219322429 1.0 21.306396289362816 -7.058905337851139 3.018730941088433 0.8002134744139429 1.1153453651464598 0.34443532372570396 0.19003776231888939 0.3289329413609742 5.885815702152276 0.10657684083621755 0.05875271797903208 8.731616686471704e-08 7.058905337851139 0.3151318907325169 EQFEGLGS(ph)TPDAK ddPTM_KYSE-520_SHP099_60min_R1 1 EQFEGLGSTPDAK 13 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 EQFEGLGS(0.715)T(0.285)PDAK 120.9 0.00072312 84274000.0 590230.0 726450.0 568490.0 498450.0 562320.0 576190.0 505530.0 667290.0 735170.0 622160.0 True False 557488.7653056654 691550.251576319 605135.775016161 545822.5381355432 606571.384836862 572593.784483172 556633.9058973496 664975.3267366575 601681.660127549 616648.1464331559 0.9040629871837241 1.121466521186215 0.9813307289033703 0.8851442127779264 0.9836588147477936 0.9285583485415385 0.9026766870492624 1.078370754186221 0.975729293289574 1.0 19.234088010506323 -7.262387285957213 24.999970787299223 1.0202875130726807 0.9623405214566023 0.13861752002919592 0.06779632425556668 190.74417385895768 5030450.802567139 0.03550691712868867 0.018574623927288033 5.465283739942181e-08 7.262387285957213 -0.057946991616078414 EQFEGLGST(ph)PDAK ddPTM_KYSE-520_SHP099_60min_R1 4 EQFEGLGSTPDAK 13 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 EQFEGLGS(0.05)T(0.95)PDAK;EQFEGLGS(0.022)T(0.978)PDAK;EQFEGLGS(0.018)T(0.982)PDAK;EQFEGLGS(0.044)T(0.956)PDAK 130.47 0.0010597000000000002 776700000.0 2023660.0 2270970.0 1716740.0 1494560.0 1556270.0 2053160.0 1564940.0 1920010.0 2412880.0 2229240.0 True False 1911403.5457338016 2161869.192404537 1827403.8072811186 1636602.5330441508 1678739.5950349655 2040345.4668589686 1723139.4075425754 1913349.9334437007 1974761.8157549414 2209490.667922478 0.8650878564384435 0.9784468537435742 0.8270701631880505 0.7407148429293897 0.7597857820388249 0.9234460667704236 0.779880826182803 0.8659687778825378 0.893763365659179 1.0 21.075282407017692 -8.120882705465904 1.7995318873894424 0.9994973643088289 0.840043471649197 0.3304338653860932 0.06871283005372043 0.6644815927462555 4.474793253461435 0.070573335218765 0.019984302938651586 7.570373285434737e-09 8.120882705465904 -0.15945389265963184 EQFLDGDGWTSR ddPTM_KYSE-520_SHP099_60min_R1 8 EQFLDGDGWTSR 12 0 P27797;K7EJB9 P27797 CALR Calreticulin 0 ;;;;;;; 273.44 4.587600000000001e-21 17708080000.0 21048220.0 23446710.0 17411220.0 13807070.0 21863350.0 23944170.0 18512970.0 18668400.0 19482010.0 20192230.0 False True 19880633.278013702 22320294.85737078 18533575.100136984 15119289.781553024 23583871.25955507 23794725.55339113 20384441.676775765 18603643.677637298 15944568.085506124 20013342.55151721 0.9933689600744156 1.1152707150199994 0.9260609542073698 0.755460500545264 1.1784074148956782 1.1889431009407896 1.0185425859924844 0.9295620474065666 0.7966969057998444 1.0 24.25445880495723 -7.341507307804889 4.071708229449512 0.890198336670028 1.0267577401961825 0.14911392943723623 0.1277529881976923 0.45697772723747254 14.177775982548187 0.0813904980556831 0.036780307266635094 4.5550452139836715e-08 7.341507307804889 0.13655940352615448 EQFVEFR ddPTM_KYSE-520_SHP099_60min_R1 1 EQFVEFR 7 0 O43852;O43852-3;O43852-2;O43852-4;H0Y875;O43852-15 O43852 CALU Calumenin 0 105.81 0.029287999999999998 351440000.0 832960.0 838310.0 588400.0 549630.0 886140.0 881160.0 716350.0 715390.0 700710.0 719510.0 False True 786754.0483354075 798036.329271036 626329.2054732874 601866.6699477156 955874.176553095 875660.3535902948 788765.6489022737 712908.4790632812 573478.7274616413 713135.7011703097 1.1032318912715835 1.1190525561423974 0.878274926420643 0.8439721485826707 1.3403818866233075 1.2279014388892182 1.106052673576501 0.9996813760597659 0.8041649387634349 1.0 19.443817104790984 -7.524579914105121 5.3113039554654184 0.8995355757104386 1.0854885671401633 0.21171411378881044 0.14412833585494128 0.28298716425573467 26.185670819849932 0.10347324130611801 0.041094625366177535 2.9882717273923655e-08 7.524579914105121 0.18595299142972466 EQFYHSCK ddPTM_KYSE-520_SHP099_60min_R1 2 EQFYHSCK 8 0 J3QL86;J3QS62;J3QQY1;Q96JB5-2;Q96JB5;Q96JB5-4 J3QL86 CDK5RAP3 CDK5 regulatory subunit-associated protein 3 0 ; 94.69200000000001 0.0038643 317640000.0 835680.0 754130.0 496380.0 479170.0 775550.0 793510.0 587990.0 614170.0 652990.0 603870.0 False True 789323.1645132205 717900.4628277916 528377.4490360816 524710.1727322863 836581.3727241214 788557.4097524104 647429.7674293965 612039.5876183562 534423.4765383359 598520.181603751 1.3187912267188848 1.199459074051869 0.8828064036542258 0.8766791644791512 1.3977496472758513 1.3175118132849748 1.0817175215288328 1.0225880537200593 0.892908030446582 1.0 19.191040368905107 -7.283581275669524 2.805857175505211 0.9539904759608281 1.152947012413076 0.21247787806325147 0.16601658749362966 0.5164249110968273 8.02489649533026 0.11707802395566916 0.051621220102504375 5.204975916095114e-08 7.283581275669524 0.19895653645224798 EQGLTLPLYQS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 EQGLTLPLYQSPVK 14 0 P51587 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 EQGLTLPLYQS(1)PVK;EQGLTLPLYQS(1)PVK 205.78 1.0571000000000001e-11 381270000.0 678940.0 772770.0 509560.0 472620.0 486920.0 784550.0 560890.0 725750.0 702800.0 761000.0 True False 641277.8447666641 735644.9692485816 542407.0529248262 517537.66270161525 525237.8338041762 779653.332435954 617590.2349588843 723232.542641323 575189.2361462539 754258.1320490411 0.8502100508012406 0.9753225560195229 0.719126556118535 0.6861545679271052 0.696363501414693 1.0336691104912896 0.8188048742426144 0.9588660856417509 0.7625893731946607 1.0 19.524698820337896 -6.250288144313495 24.972666709507145 0.9062162105429473 0.7867853052653412 0.2591058595535902 0.10887167893059278 1194.480361466928 2674983.9669603095 0.03762968344540121 0.03729943716271141 5.619683485112759e-07 6.250288144313495 -0.11943090527760614 EQGLTLPLYQS(ph)PVKELDK ddPTM_KYSE-520_SHP099_60min_R1 1 EQGLTLPLYQSPVKELDK 18 1 P51587 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 EQGLTLPLYQS(1)PVKELDK 140.66 4.6508e-06 142370000.0 146960.0 139370.0 128760.0 106240.0 121420.0 160580.0 107410.0 136870.0 152640.0 152940.0 True False 138807.8358425031 132674.45600136492 137060.07562328427 116337.01765777914 130975.06321470297 159577.76065587363 118268.05102058116 136395.22991569818 124924.42374126965 151585.07058551937 0.9157091480469525 0.8752475127589449 0.9041792512538986 0.7674701552627214 0.8640366937772483 1.052727422558708 0.7802090968705139 0.8997932935535919 0.8241208930320836 1.0 17.209768145802983 -6.055502099720778 24.999958671693847 0.9037398677007162 0.8624208043226563 0.06919344290477591 0.0817566378150371 1008.9526309111448 454462.3882499578 0.026812868223684293 0.02681304481636556 8.800308569163794e-07 6.055502099720778 -0.041319063378059906 EQGLTLPLYQS(ph)PVKELDKFK ddPTM_KYSE-520_SHP099_60min_R1 1 EQGLTLPLYQSPVKELDKFK 20 2 P51587 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 EQGLTLPLYQS(1)PVKELDKFK 187.17 4.2986000000000005e-13 916960000.0 860150.0 928260.0 847510.0 848400.0 818560.0 808700.0 696650.0 873190.0 1044500.0 672870.0 True False 812435.7648334862 883664.9962533347 902141.8506639454 929031.6809192382 882976.0150306976 803652.6033279657 767074.1806488006 870161.1076940788 854845.1297022813 666908.8952849393 1.218211018892423 1.3250160591662006 1.3527212742881498 1.3930413696496071 1.323982962700539 1.20504106184489 1.1501933563520175 1.3047675834677528 1.2818019608765985 1.0 19.347130166434678 -6.256921750606278 7.360338590331631 1.2048627063989734 1.3285056460983804 0.35873466951185173 0.0882024042838982 0.1662561051201738 70.61194119660372 0.029848095992047713 0.028282423772487884 5.53449818545113e-07 6.256921750606278 0.12364293969940698 EQGNIY(ph)KPNNK ddPTM_KYSE-520_SHP099_60min_R1 1 EQGNIYKPNNK 11 1 Q03135 Q03135 CAV1 Caveolin-1 1 EQGNIY(1)KPNNK 70.41199999999999 0.021363 474440000.0 741810.0 764610.0 633370.0 806420.0 808570.0 733930.0 671080.0 782540.0 888730.0 600930.0 True False 700660.320538426 727876.9878969925 674198.0436278309 883061.9143409854 872199.8588660219 729349.2706324897 738919.3155096493 779825.5513862089 727359.0350601324 595606.2277164652 1.176381790406616 1.222077530464463 1.1319526429612465 1.4826270667561952 1.464390092444143 1.224549436678644 1.2406171747777752 1.3092971750413598 1.2212079075277689 1.0 19.183999313394917 -8.152683479524098 3.5491623758839803 1.0000270944757095 1.2837456338030002 0.3785499930752009 0.10800903982945197 0.9283806929392617 19.510500358843156 0.11281797640300585 0.029791771747504057 7.035849165397293e-09 8.152683479524098 0.28371853932729074 EQGVLSFWR ddPTM_KYSE-520_SHP099_60min_R1 3 EQGVLSFWR 9 0 P05141;P12236 P05141 SLC25A5;SLC25A6 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed 0 ;; 173.39 0.0004939 1922370000.0 1132910.0 2225450.0 1021760.0 1667560.0 2449220.0 2208390.0 2216500.0 1547850.0 1994800.0 1112638.0 False True 1070065.2238999063 2118536.041531446 1087624.2844738022 1826044.4010298057 2641959.6798444637 2194606.618849321 2440565.4509553863 1542480.8696209074 1632594.6048158058 1102780.8929392656 0.9703334821551346 1.9210851902637398 0.9862560109968299 1.6558542251877526 2.395724932087635 1.9900658715622002 2.213100958296888 1.3987192555628163 1.4804342506011474 1.0 20.072714745502207 -5.511997698079915 24.358153906447342 1.8221636598841446 1.3496848882340629 0.15104554825303518 0.4565653552961698 649.041769746695 1452936.4414038921 0.13083765526757524 0.18114311982475875 3.076113119225574e-06 5.511997698079915 -0.4724787716500818 EQHFNQR ddPTM_KYSE-520_SHP099_60min_R1 1 EQHFNQR 7 0 Q8N1G2;H0YCQ1;H0Y4T0 Q8N1G2 CMTR1 Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1 0 67.032 0.031304000000000005 0.0 134460.0 130610.0 98391.0 119510.0 172700.0 158500.0 99284.0 116410.0 117320.0 165470.0 False True 127001.23576063543 124335.29955039306 104733.44129116624 130868.19446800814 186290.50747141466 157510.7427074101 109320.59563846362 116006.20088029816 96017.64539652609 164004.0645337121 0.7743785870290397 0.7581232812973067 0.6386027174932459 0.7979570191756273 1.1358895768898547 0.9604075554788017 0.6665724776351019 0.7073373529498858 0.5854589376764442 1.0 17.323372044218992 -10.802136253090383 5.419794165261141 1.0180772452570626 0.7864433087659795 0.1540493239990447 0.15373182061160567 0.038388134441251665 0.0014014577378963335 0.1701632477251466 0.03998169933872573 1.5771163965105054e-11 10.802136253090383 -0.2316339364910831 EQICEVEEGDKPDVDK ddPTM_KYSE-520_SHP099_60min_R1 1 EQICEVEEGDKPDVDK 16 1 P47895;H0YKF9;H0Y2X5;H0YNQ3 P47895 ALDH1A3 Aldehyde dehydrogenase family 1 member A3 0 229.96 1.0748e-18 432670000.0 231380.0 277950.0 206060.0 172970.0 243980.0 228470.0 201440.0 222030.0 252560.0 220200.0 False True 218544.89015540556 264596.8647885441 219342.95730765734 189409.01679467308 263179.83794369333 227044.0339833568 221803.5210649461 221259.82975219138 206701.4705194904 218249.19931300782 1.0013548312815281 1.212361216542497 1.0050115097699894 0.8678566399825695 1.205868515312384 1.0402972139097548 1.0162856118745287 1.0137944626997957 0.9470892501330282 1.0 17.735616835511358 -7.122436672186988 1.8666731010206101 0.9799523142237645 1.0577561389572478 0.09813392550898858 0.09508141162408303 0.9244907289403418 6.141181534810018 0.06505112320712844 0.029610322248320442 7.543333829708456e-08 7.122436672186988 0.07780382473348335 EQIS(ph)DIDDAVR ddPTM_KYSE-520_SHP099_60min_R1 2 EQISDIDDAVR 11 0 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 EQIS(1)DIDDAVR;EQIS(1)DIDDAVR 104.95 0.00093978 91043000.0 89740.0 83920.0 86551.0 88307.0 91787.0 85730.0 87275.0 90525.0 102331.0 80932.0 True False 84761.94330774523 79888.35723351201 92130.21594649636 96699.67072953234 99010.11470340913 85194.92727007113 96097.60872191786 90210.9899036938 83750.26995458512 80215.00544414314 1.0566843801658568 0.9959278415700091 1.148540917455279 1.2055060046946966 1.2343091439712457 1.0620821727600045 1.1980004014190886 1.1246148947345176 1.0440723589167331 1.0 16.29158451965738 -10.113700742916711 13.492986917652184 1.0000000136727099 1.1228881095152883 0.18342447902817094 0.07480267118503438 1.1402097785481257e-10 0.0 0.07738820041996924 0.01876939555929425 7.696606037132551e-11 10.113700742916711 0.12288809584257843 EQIVPKPEEEVAQK ddPTM_KYSE-520_SHP099_60min_R1 1 EQIVPKPEEEVAQK 14 1 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A0A0MRF8;A0A0A6YYL6;P18621-2;P18621;P18621-3 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 0 136.17 7.9427e-06 311590000.0 317600.0 301080.0 277560.0 192590.0 321410.0 325880.0 283480.0 283030.0 323040.0 262620.0 False True 299982.09488009685 286615.6648697063 295451.9617117024 210893.69569570493 346703.13842725806 323846.06204095215 312136.92489818705 282048.2349896984 264384.0791757056 260293.39111526817 1.1524768016382443 1.1011254017693504 1.1350728516225164 0.8102153296789348 1.3319705772849386 1.2441578353310567 1.1991734540811316 1.0835781645520008 1.0157156816118544 1.0 17.98977915641983 -7.632896675772396 3.3954661954992282 1.0059258837297855 1.1366534787575513 0.14355530450104537 0.12730175282109393 0.5282487431284683 11.348449766475264 0.10888415778816121 0.03493810338271944 2.328645206328965e-08 7.632896675772396 0.13072759502776576 EQIYDVYR ddPTM_KYSE-520_SHP099_60min_R1 1 EQIYDVYR 8 0 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 0 119.07 0.007278699999999999 234600000.0 543080.0 558430.0 385440.0 423850.0 573770.0 578000.0 471780.0 497800.0 447060.0 501590.0 False True 512954.26979685994 531602.184579481 410286.07912580465 464132.5765648504 618922.434695274 574392.4876017867 519472.1265290917 496073.2479873929 365885.1734654872 497146.30283111474 1.0317974143139013 1.06930732774668 0.8252823701782264 0.9335935396114584 1.2449502916358361 1.155379179792298 1.044907954802917 0.9978415713088661 0.7359708226368563 1.0 18.923310952599465 -7.5606123226996855 12.34475798131896 0.8674365151082816 1.042394837700753 0.24433373148208481 0.12184789864864645 1.4755140693232054 477.05224214073615 0.08763640017218971 0.033131926753868404 2.7503481833661407e-08 7.5606123226996855 0.17495832259247146 EQKNS(ph)LRK ddPTM_KYSE-520_SHP099_60min_R1 1 EQKNSLRK 8 2 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 EQKNS(1)LRK 54.471000000000004 0.034926 384090000.0 325700.0 451110.0 252880.0 260390.0 419360.0 529790.0 321510.0 205530.0 344180.0 1598400.0 True False 307632.77173314674 429437.9984700857 269181.0494223056 285137.38731089205 452361.246167994 526483.3840943784 354011.3684352205 204817.06440106276 281685.58807173866 1584239.4195363822 0.19418325787094323 0.27106887581156014 0.1699118492462962 0.17998377252494813 0.28553843604041534 0.33232564320893526 0.2234582501039014 0.12928416114087174 0.17780493566696642 1.0 20.595358949739406 -10.659019224798556 2.723927464747506 1.0918752555306095 0.22006612984211452 0.9412731182091572 0.05858409103506313 12593633.635316106 11335723.516111007 8075513.529602481 0.016522021346759567 2.192707869184829e-11 10.659019224798556 -0.871809125688495 EQLEEEEEAKHNLEK ddPTM_KYSE-520_SHP099_60min_R1 8 EQLEEEEEAKHNLEK 15 1 P35579 P35579 MYH9 Myosin-9 0 ;;;;;;; 301.94 1.0500999999999999e-33 9021270000.0 7200710.0 6503910.0 4664360.0 4092680.0 6597260.0 5994980.0 4947750.0 5674530.0 5779680.0 5624590.0 False True 6801272.262040486 6191452.401032058 4965032.108839865 4481647.076690889 7116426.828725343 5957563.106095074 5447916.855386643 5654846.3798752595 4730235.805876189 5574760.5084648 1.2200115595483128 1.1106221319518323 0.8906269787376311 0.80391741849464 1.276543955192273 1.0686670928821105 0.9772467977977608 1.0143657958559575 0.8485092406559399 1.0 22.41047839755502 -4.5412754680784895 5.681919295490411 0.9920640367710728 1.1965726268122538 0.26922126153301307 0.12431820880022997 0.2066859280014098 21.752333936165275 0.033288312478819956 0.09984583059480479 2.8755738921595286e-05 4.5412754680784895 0.20450859004118105 EQLPPMSEDFLLDALS(ph)EDFSGPQNASSLK ddPTM_KYSE-520_SHP099_60min_R1 1 EQLPPMSEDFLLDALSEDFSGPQNASSLK 29 0 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 1 EQLPPMSEDFLLDALS(0.991)EDFS(0.009)GPQNASSLK 124.91 0.00010851 48656000.0 27381.0 34827.0 32762.0 26371.0 20500.0 26916.0 22791.0 37456.0 32827.0 32738.0 True False 25862.12134732974 33153.858643607244 34873.8909410534 28877.291911269735 22113.233370955437 26748.00726001673 25094.9366987251 37326.073878296105 26866.444301327683 32447.96678977859 0.7970336482061657 1.0217545789048026 1.0747635180654525 0.8899568992522006 0.6814982742746553 0.824335386969226 0.7733901128939221 1.1503362944162703 0.8279854474515446 1.0 14.985840460417842 -9.93447696183795 11.600938777472084 0.9999999998050851 0.8982116925317426 0.04926608466186433 0.1390107590912742 0.0 0.0 0.1411475659388391 0.03423331287227531 1.1628482353595897e-10 9.93447696183795 -0.10178830727334254 EQLQLLEEQHR ddPTM_KYSE-520_SHP099_60min_R1 1 EQLQLLEEQHR 11 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 95.631 0.0017664999999999998 0.0 264360.0 211060.0 176340.0 151620.0 257260.0 231580.0 194580.0 227600.0 201790.0 190750.0 False True 249695.42381140508 200920.36079248108 187707.15855397595 166029.91921378457 277504.89839082916 230134.6233197604 214250.0453177978 226810.50872223912 165150.0227119416 189060.10340125416 1.3207198098345516 1.0627327351347902 0.9928438373673859 0.8781859113945835 1.4678131102142848 1.2172564130642158 1.1332377453696905 1.199674096447863 0.8735318543724336 1.0 17.52848542366888 -7.758875581471921 24.99728040708784 0.936765886733342 1.1523153675608995 0.2384639218599387 0.15853181038380382 99.02381114884876 965571.5986207293 0.12441076955100626 0.04209717496536259 1.74230594510866e-08 7.758875581471921 0.21554948082755743 EQLRQEQALLEEIER ddPTM_KYSE-520_SHP099_60min_R1 1 EQLRQEQALLEEIER 15 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 109.87 0.00022786 99310000.0 99123.0 108290.0 87576.0 154240.0 100780.0 82806.0 69779.0 69601.0 98052.0 85887.0 False True 93624.44959319833 103087.5858533962 93221.28908655426 168898.92322605313 108710.81264023847 82289.17703867392 76832.94229741291 69359.5703759956 80248.2284897731 85126.10799907488 1.0998323756821562 1.2109984618880558 1.0950963373958944 1.9841024944766492 1.2770560665292003 0.9666737851984047 0.9025778824311796 0.8147861097649309 0.9426981965467657 1.0 16.377314050875245 -6.259051507364712 4.299688757631643 0.907383066646922 1.3534517853025991 0.4232630331515629 0.2388941663414269 0.21232550379250711 10.01092114198721 0.0886264838618507 0.08309516808537656 5.507423744366178e-07 6.259051507364712 0.4460687186556771 EQLSAQELMESGLQIQKS(ph)PEPEVLSTQEDLFDQSNK ddPTM_KYSE-520_SHP099_60min_R1 2 EQLSAQELMESGLQIQKSPEPEVLSTQEDLFDQSNK 36 1 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 EQLSAQELMES(0.002)GLQIQKS(0.998)PEPEVLSTQEDLFDQSNK;EQLS(0.045)AQELMES(0.258)GLQIQKS(0.642)PEPEVLS(0.027)T(0.027)QEDLFDQSNK 222.76 6.9896e-23 120943000.0 46168.0 55086.0 47506.0 33440.0 43146.0 43072.0 29496.0 46477.0 65279.0 46102.0 True False 43606.969006373714 52439.58587422829 50568.31277228746 36618.12754589739 46541.34473284112 42803.17167125282 32477.743533219047 46315.78213481333 53425.979149674684 45693.572146813254 0.9543348650060606 1.147635945505423 1.1066832903720394 0.8013846548972687 1.018553432051755 0.9367438276378658 0.7107726975003879 1.0136170134827918 1.1692230797368444 1.0 15.479703610825215 -3.8853326319351464 13.351484848297984 0.9824569023285965 0.00039244818855685377 0.0035488292301624202 0.13742952456404064 1122339.4490234794 1624418.126305799 0.035996806156009885 32506849.149980605 0.0001302169047774924 3.8853326319351464 -0.9820644541400396 EQLVDQGIMPPLKS(ph)PAAFHEQIK ddPTM_KYSE-520_SHP099_60min_R1 2 EQLVDQGIMPPLKSPAAFHEQIK 23 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2S3;Q9ULH7-2;Q9ULH7-3 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2;Phosphatase and actin regulator 1 EQLVDQGIMPPLKS(1)PAAFHEQIK;EQLVDQGIMPPLKS(1)PAAFHEQIK 151.41 2.4972e-07 608540000.0 208309.0 192446.0 201063.0 199187.0 299651.0 815480.0 804470.0 1128430.0 1177580.0 1056660.0 True False 196753.68451630374 183200.6052926648 214023.8426921746 218117.67259224475 323231.82891903224 810390.2868330526 885793.678470597 1124515.7397075405 963761.156376076 1047298.8144690404 0.18786776209238232 0.17492677616134214 0.2043579537523686 0.20826689534908532 0.30863381534801443 0.7737908948592712 0.8457888677355916 1.0737296024512808 0.9202351258887691 1.0 19.998241698934336 -6.343058327216378 1.6520814117231113 0.9841137294134087 0.18273317427218344 0.9803989013080902 0.050747568354210355 0.04404958885213429 0.2387505506505314 0.021600155556991033 0.018490287554559955 4.5388065485102187e-07 6.343058327216378 -0.8013805551412252 down EQMMNSSISSGS(ph)GSLR ddPTM_KYSE-520_SHP099_60min_R1 1 EQMMNSSISSGSGSLR 16 0 A0A0C4DFT3;A0A590UJD9;A0A590UK70;A0A590UK02;Q12959-7;A0A590UK81;A0A590UKA8;A0A590UJR5;A0A590UJ81;A0A590UJ18;A0A590UJ68;A0A590UJX2;A0A590UJS9;A0A590UJR4;A0A590UJ29;A0A590UK48;A0A590UJ64;E7EQD7;Q12959-9;Q12959-8;Q12959-5;Q12959-3;Q12959-6;Q12959;C9JUA9;A0A590UJ08;Q12959-4;Q12959-2;A0A590UJ25;A0A590UJL2;A0A590UJC5 A0A0C4DFT3;A0A590UJ08 DLG1 Disks large homolog 1 1 EQMMNSSIS(0.183)S(0.183)GS(0.595)GS(0.039)LR 150.91 7.0704999999999995e-06 412310000.0 185320.0 209980.0 218670.0 177750.0 184740.0 199490.0 160670.0 230620.0 244710.0 190870.0 True False 175039.9301737391 199892.2456135942 232765.81808437078 194643.30655751366 199277.9869731859 198244.90891294167 176912.09158808997 229820.03304711287 200276.83263709428 189179.04029461293 0.9252606943197583 1.0566299802678845 1.2303996136246338 1.028884099709942 1.0533830104161943 1.047922162012294 0.9351569355282734 1.214828200255212 1.0586629064467106 1.0 17.529392731517593 -7.261857681228076 24.999999902573176 1.1025591520462281 1.0480818634029456 0.05131684626933841 0.09305707895091098 120.28455955773359 7188030.225602189 0.047536059918284516 0.0251463549053494 5.4719524999194214e-08 7.261857681228076 -0.054477288643282495 EQMMNSSISSGSGS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 6 EQMMNSSISSGSGSLR 16 0 A0A0C4DFT3;A0A590UJD9;A0A590UK70;A0A590UK02;Q12959-7;A0A590UK81;A0A590UKA8;A0A590UJR5;A0A590UJ81;A0A590UJ18;A0A590UJ68;A0A590UJX2;A0A590UJS9;A0A590UJR4;A0A590UJ29;A0A590UK48;A0A590UJ64;E7EQD7;Q12959-9;Q12959-8;Q12959-5;Q12959-3;Q12959-6;Q12959;C9JUA9;A0A590UJ08;Q12959-4;Q12959-2;A0A590UJ25;A0A590UJL2;A0A590UJC5 A0A0C4DFT3;A0A590UJ08 DLG1 Disks large homolog 1 1 EQMMNSSISSGSGS(1)LR;EQMMNSSISS(0.001)GS(0.343)GS(0.655)LR;EQMMNSSISSGS(0.013)GS(0.987)LR;EQMMNSSISSGSGS(1)LR;EQMMNSSISSGS(0.001)GS(0.999)LR;EQMMNSSISSGS(0.001)GS(0.999)LR 310.08 5.0549e-47 4892850000.0 2965260.0 2615400.0 2305510.0 2112290.0 2179410.0 2075020.0 2083820.0 2350710.0 2760320.0 2248370.0 True False 2800771.116700742 2489752.2582045626 2454126.8635464273 2313041.4065168533 2350917.1678533666 2062069.030490411 2294472.861723372 2342555.935669837 2259115.470004592 2228451.1910053906 1.2568240794348038 1.117256805198988 1.101270188663733 1.0379591959890757 1.0549556469274628 0.9253373099727105 1.029626707097944 1.0512036095405648 1.0137603547804728 1.0 21.087609931770984 -3.3420125714819826 0.6469319030767742 1.0092133550180475 1.8986874122249962 0.8219730958705098 0.035071348131294665 3.94027964194762 0.5173610403671453 0.015778914856785443 3.3913092899859536 0.0004549748898436015 3.3420125714819826 0.8894740572069486 EQNSALPT(ph)SSQDEELMEVVEK ddPTM_KYSE-520_SHP099_60min_R1 1 EQNSALPTSSQDEELMEVVEK 21 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 EQNS(0.081)ALPT(0.57)S(0.174)S(0.174)QDEELMEVVEK 86.13600000000001 0.004624100000000001 24933000.0 60836.0 74187.0 65526.0 48048.0 54328.0 59268.0 45692.0 68127.0 77439.0 70502.0 True False 57461.30580644067 70622.94516304284 69749.91080530696 52614.467473842014 58603.304515964235 58898.08642765168 50310.99327094673 67890.68333796141 63378.02967832923 69877.40712972604 0.8223159411133398 1.010669228638274 0.9981754285160813 0.7529539179403765 0.8386588301304361 0.8428773883711589 0.7199894119932836 0.9715684385930876 0.906988857795899 1.0 16.092538456171514 EQNVAFS(ph)PLKR ddPTM_KYSE-520_SHP099_60min_R1 2 EQNVAFSPLKR 11 1 Q12882 Q12882 DPYD Dihydropyrimidine dehydrogenase [NADP(+)] 1 EQNVAFS(1)PLKR;EQNVAFS(1)PLKR 130.21 9.7728e-05 1220730000.0 1153390.0 915000.0 945550.0 816030.0 955670.0 1065200.0 946650.0 962520.0 1239900.0 985690.0 True False 1089409.1574740368 871042.0265570005 1006501.665933491 893585.2458516349 1030875.7919815109 1058551.6916841213 1042346.6204136772 959181.2427738577 1014765.4153354315 976957.5534552166 1.1151038789977226 0.8915863575406899 1.0302409376679522 0.9146612794908868 1.0551899499989545 1.0835186113668192 1.0669313285180082 0.9818044186070426 1.0386995952347156 1.0 19.897936356231337 -5.832179008980567 24.999999999967795 1.040534475462538 0.9840353907707021 0.12598543075478452 0.06366195154354756 85.29834067763048 30143.364917337327 0.018852501420522187 0.021376735249321512 1.47170576469684e-06 5.832179008980567 -0.056499084691835955 EQPGEEYS(ph)EEEESVLK ddPTM_KYSE-520_SHP099_60min_R1 1 EQPGEEYSEEEESVLK 16 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 EQPGEEYS(1)EEEESVLK 136.35 0.00026721 0.0 104770.0 107700.0 103520.0 94652.0 84648.0 108570.0 107450.0 108970.0 127070.0 89929.0 True False 98958.19924618304 102525.93033900425 110193.06483785641 103647.69762183848 91309.31601876274 107892.37435800336 118312.09461094334 108592.00850378917 103997.29117402459 89132.2990237034 1.1102395016184492 1.1502668669158755 1.2362865767498292 1.1628522853906744 1.0244245578640399 1.2104744917362786 1.3273762250817744 1.2183238813901878 1.166774472476785 1.0 16.44366069791246 -6.4117826270336495 21.63093919810484 1.2071879218595774 1.1418248124867787 0.03502549550518719 0.09130102871727741 21.272651257776403 4106.497218723118 0.032060208137064394 0.028274396902698964 3.874515235379806e-07 6.4117826270336495 -0.06536310937279866 EQPPAETPTDAAVLTSPPAPAPPVT(ph)PSKPMAGTTDREEATR ddPTM_KYSE-520_SHP099_60min_R1 1 EQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATR 41 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 EQPPAETPTDAAVLTSPPAPAPPVT(0.513)PS(0.094)KPMAGT(0.12)T(0.12)DREEAT(0.153)R 139.64 4.5016999999999996e-07 1184100000.0 811740.0 1027600.0 821080.0 667720.0 700680.0 831380.0 675400.0 769190.0 1069200.0 819090.0 True False 766711.1640364287 978232.5535409542 874008.130574449 731179.908042661 755819.5296761494 826191.0490352483 743676.0232687874 766521.8594202958 875060.2323386098 811833.4998423763 0.9444192241208221 1.2049669713443527 1.0765854460848736 0.9006525453613644 0.9310031303498778 1.0176853371974175 0.9160450060427142 0.9441860425433564 1.0778814036480502 1.0 19.630824347681703 -5.160078051412611 7.12444378314348 0.965653386779159 1.0901240220477368 0.2776720615385646 0.07701808686484805 0.28894635221610127 17.717616730784567 0.020181546211258606 0.03522190196734761 6.917066462157368e-06 5.160078051412611 0.12447063526857782 EQPPTSGKQS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 2 EQPPTSGKQSPTK 13 1 C9J5P6;P29475-2;P29475;P29475-5 C9J5P6 NOS1 Nitric oxide synthase;Nitric oxide synthase, brain 1 EQPPT(0.005)S(0.01)GKQS(0.976)PT(0.008)K;EQPPT(0.014)S(0.014)GKQS(0.958)PT(0.014)K 61.477 0.022779 1804300000.0 2063250.0 2242750.0 1878180.0 1392600.0 1582680.0 2198710.0 1522930.0 2018760.0 2489500.0 1983660.0 True False 1948797.4095130942 2135004.923563618 1999250.4879942515 1524952.2852995428 1707227.911782624 2184987.035319938 1676882.626764485 2011757.3927421253 2037469.5551879636 1966086.3156641265 0.9912064358450141 1.0859161708993597 1.016868116148259 0.7756283501644878 0.8683382302093575 1.1113383059084405 0.8529038696849119 1.0232294364261274 1.0363072765194057 1.0 20.90689522998895 -9.199572927279636 13.390179602302076 1.0000000782819813 0.9711597206405611 0.0054940929524612825 0.10249628686594164 0.0 0.0 0.10312946254565246 0.025012568658170916 6.315781149852846e-10 9.199572927279636 -0.028840357641420233 EQQEAIEHIDEVQNEIDR ddPTM_KYSE-520_SHP099_60min_R1 3 EQQEAIEHIDEVQNEIDR 18 0 Q01105;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105-2 Q01105;Q01105-2 SET;SETSIP Protein SET;Protein SETSIP 0 ;; 220.82 3.5901e-18 2151050000.0 1734270.0 1463960.0 1036370.0 1330580.0 1487480.0 1475800.0 1547280.0 1615320.0 1125900.0 1247260.0 False True 1638066.5859184675 1393629.1641512394 1103176.0684506304 1457037.9231465342 1604536.213396528 1466588.9847797875 1703694.1623975846 1609716.8319385233 921464.9416292937 1236210.2467535965 1.3250711925582104 1.1273399228092793 0.8923854751630427 1.1786327827105882 1.2979476732296873 1.18635886462775 1.3781589069267501 1.30213839932632 0.7453950038427094 1.0 20.23749269780415 -7.758357184759238 24.999779063239263 0.8726974607679465 1.2041641201908424 0.47774252616317736 0.1413420639306933 69.65710001279948 565028.9079952254 0.1125610234399587 0.03843787357854533 1.7443868947488502e-08 7.758357184759238 0.3314666594228959 EQQEAIEHIDEVQNEIDRLNEQAS(ph)EEILK ddPTM_KYSE-520_SHP099_60min_R1 7 EQQEAIEHIDEVQNEIDRLNEQASEEILK 29 1 Q01105;A0A0C4DFV9;Q01105-3;Q01105-4;Q01105-2 Q01105;Q01105-2 SET Protein SET 1 EQQEAIEHIDEVQNEIDRLNEQAS(1)EEILK;EQQEAIEHIDEVQNEIDRLNEQAS(1)EEILK;EQQEAIEHIDEVQNEIDRLNEQAS(1)EEILK;EQQEAIEHIDEVQNEIDRLNEQAS(1)EEILK;EQQEAIEHIDEVQNEIDRLNEQAS(1)EEILK;EQQEAIEHIDEVQNEIDRLNEQAS(1)EEILK;EQQEAIEHIDEVQNEIDRLNEQAS(1)EEILK 380.32 4.930899999999998e-109 3238960000.0 530829.0 504887.0 450397.0 464456.0 506383.0 426213.0 434350.0 428430.0 604410.0 460185.0 True False 501382.8571886237 480631.4706691624 479430.3112806803 508597.7585962111 546232.4611748551 423552.84657131485 478258.33684749383 426943.87632631394 494664.3799361945 456108.1189185124 1.099263171147804 1.0537665319547431 1.0511330348985404 1.1150815727686627 1.197594251271033 0.9286237823953012 1.0485635247657996 0.9360584883659813 1.0845331609292632 1.0 18.79901632544639 -6.271936943479311 24.985273225509278 0.9986224344839179 1.0983609374078545 0.44799564960503435 0.05747826759464065 706.4325156306901 1681377.3348713182 0.019968114613347212 0.01779768549886045 5.346419800372911e-07 6.271936943479311 0.0997385029239366 EQQEAIEHIDEVQNEIDRLNEQASEEILK ddPTM_KYSE-520_SHP099_60min_R1 2 EQQEAIEHIDEVQNEIDRLNEQASEEILK 29 1 Q01105;A0A0C4DFV9;Q01105-3;Q01105-4;Q01105-2 Q01105;Q01105-2 SET Protein SET 0 ; 306.99 1.5290999999999997e-64 415780000.0 138458.0 134490.0 76239.0 139615.0 125747.0 91448.0 91976.0 105122.0 111422.0 87518.0 False True 130777.45873082004 128028.89852639426 81153.48792671291 152883.9676232195 135642.57349744064 90877.23911108676 101273.83167925672 104757.35631765929 91190.57352004552 86742.6586079737 1.507648725892274 1.4759623532523982 0.935566066674062 1.7625003669090429 1.5637354869472708 1.0476649040906039 1.1675204945810511 1.2076797967549222 1.051277133805338 1.0 16.404454041124456 -6.267856390182615 24.936401013972834 1.1123516945723042 1.4394593235377953 0.430522355745835 0.20306630093643394 563.1857450089328 2188524.553431094 0.07292093579707842 0.06586849557245564 5.396890540558448e-07 6.267856390182615 0.32710762896549106 EQQSWVIS(ph)PPQPSPQK ddPTM_KYSE-520_SHP099_60min_R1 1 EQQSWVISPPQPSPQK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 EQQSWVIS(0.999)PPQPS(0.001)PQK 195.97 1.3455999999999998e-09 0.0 245920.0 283850.0 212740.0 163640.0 176350.0 241940.0 208640.0 272490.0 289070.0 275410.0 True False 232278.32737063413 270213.4199324638 226453.56079603487 179192.29639984 190227.7417057558 240429.96271691375 229731.36733017446 271544.795789644 236582.17486169268 272970.08166573767 0.8509296181955495 0.9899012312395117 0.8295911383919939 0.6564539795217113 0.69688128656787 0.8807923610153345 0.8415990716941988 0.9947786003968048 0.8666963552122778 1.0 18.05838331057174 -7.0127569983114935 2.155729250677631 0.9484247025640362 0.811309566296245 0.2917015615618399 0.09390408188666748 0.4876923791927857 4.4773730798396 0.06036997280824351 0.031795663111926595 9.710531506421701e-08 7.0127569983114935 -0.13711513626779126 EQQSWVISPPQPS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 2 EQQSWVISPPQPSPQK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 EQQSWVISPPQPS(1)PQK;EQQSWVISPPQPS(1)PQK 240.61 4.2546000000000006e-23 690820000.0 1113700.0 1312290.0 920560.0 733900.0 821120.0 1127860.0 811870.0 1030980.0 1148430.0 1227210.0 True False 1051920.8408940926 1249245.6186125507 979900.7705480786 803649.6353449185 885737.4724662893 1120820.6073815746 893941.7426876382 1027403.7710125396 939904.0615643755 1216337.874154933 0.8648261829591787 1.0270547724911392 0.8056156035006948 0.6607124980822164 0.7282001911530275 0.9214714358543507 0.7349452497388657 0.8446697195270205 0.772732709829813 1.0 20.214112605391602 -4.834140646224857 8.947049104881685 0.7958851986122432 0.9455256745295615 0.22427378213949412 0.10007074850272214 0.3407605315278002 38.17127825480535 0.025313145749002345 0.053002589454840515 1.4650733002772082e-05 4.834140646224857 0.14964047591731833 EQS(ph)ELDQDLDDVEEVEEEETGEETK ddPTM_KYSE-520_SHP099_60min_R1 3 EQSELDQDLDDVEEVEEEETGEETK 25 0 P55209;P55209-2;H0YIV4;F5H4R6;F8VY35;F8W0J6;F8W020;F8VXI6;F8VUX1;F8VVB5 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 EQS(1)ELDQDLDDVEEVEEEETGEETK;EQS(1)ELDQDLDDVEEVEEEETGEETK;EQS(1)ELDQDLDDVEEVEEEETGEETK 154.13 2.1348e-11 267286000.0 235224.0 230016.0 185596.0 209383.0 192746.0 228038.0 213034.0 247438.0 246670.0 243278.0 True False 222175.65581258122 218965.6860989454 197559.81512409967 229282.69736670543 207914.0136252768 226614.73025559884 234569.55573148158 246579.6953304634 201880.94604467344 241122.74618742015 0.9214213894191811 0.9081087933891875 0.8193329673283505 0.9508961762922538 0.8622745755544322 0.9398314088520521 0.9728221805716957 1.0226314158631955 0.8372538436824006 1.0 17.87940822767468 -6.451615762309834 5.412202539489408 0.9597216680447331 0.892704440054886 0.23869600288717596 0.056146403434736765 0.3168622785421916 17.194711175241444 0.019509598008804734 0.016908454355501878 3.534957833321233e-07 6.451615762309834 -0.0670172279898471 EQS(ph)PEKPR ddPTM_KYSE-520_SHP099_60min_R1 2 EQSPEKPR 8 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 EQS(1)PEKPR;EQS(1)PEKPR 101.39 0.0016257 1307490000.0 2269750.0 1621860.0 1548110.0 1924320.0 1864060.0 1890860.0 2154160.0 1977010.0 2123150.0 2036280.0 True False 2143842.4428655505 1543943.4111385099 1647903.647663579 2107206.794232097 2010750.9169494233 1879058.4413610948 2371923.515375618 1970152.213747601 1737639.4802560054 2018240.143401867 1.0622335750650431 0.7649948972554371 0.8165052375214066 1.0440813007912286 0.9962892292689114 0.9310380865746863 1.1752434531292177 0.9761733360564264 0.8609676533968391 1.0 20.944666415266212 -5.264176745714207 24.84985431270296 1.001255137777275 0.8696196014444221 0.20539015146016548 0.10403844207458021 316.72692419359146 2875259.9980760673 0.02901177372209045 0.04537158359730327 5.44281100569164e-06 5.264176745714207 -0.13163553633285285 EQSEVS(ph)VS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 EQSEVSVSPR 10 0 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 2 EQS(0.184)EVS(0.816)VS(1)PR;EQS(0.022)EVS(0.978)VS(1)PR 65.092 0.02461 0.0 600740.0 611250.0 567620.0 490580.0 528650.0 539560.0 482980.0 548400.0 623060.0 494060.0 True False 567415.7546545 581884.6324950451 604209.6934241108 537204.5757017444 570251.7473929558 536192.4059003807 531804.3318305574 546497.7283975226 509928.0100644357 489683.0127728642 1.1587409402696425 1.1882883770055301 1.2338792191355206 1.0970455614945391 1.1645324271386617 1.0949785716767135 1.0860175214557237 1.116023456282343 1.0413430663582401 1.0 18.901488623896956 -6.879205509979556 0.3128670690205441 0.9912389723165086 1.2163963889975125 0.7339710725885781 0.03420893124327182 0.8632319377221462 0.24064751565359538 0.051282870848601066 0.07012640272114763 1.3206705394331054e-07 6.879205509979556 0.22515741668100386 EQSEVSVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 EQSEVSVSPR 10 0 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 EQS(0.001)EVS(0.009)VS(0.99)PR;EQSEVSVS(1)PR;EQSEVSVS(1)PR;EQSEVSVS(1)PR;EQSEVSVS(1)PR;EQSEVSVS(1)PR 201.48 1.1636e-06 31302200000.0 8420890.0 7817360.0 6896230.0 6844060.0 6834430.0 7042400.0 6796980.0 7225110.0 8495450.0 7228910.0 True False 7953766.445071967 7441802.2915034145 7340772.020158136 7494517.404658327 7372260.758412632 6998445.769354361 7484085.07053224 7200047.779763357 6952890.432866675 7164867.481406875 1.1101065673178627 1.0386517700174074 1.0245509828629407 1.0460092142816189 1.0289458636246869 0.9767725345256719 1.0445531742148404 1.0049101115195467 0.9704143797369191 1.0 22.772508590533835 -1.0000000000000002 0.4413292187094815 1.001468846210499 3.104562476493259 0.6516124755910527 0.022553547154082802 55.857367221377615 0.6872992352869319 0.014609300116093356 105.23721024811775 0.09999999999999995 1.0000000000000002 2.10309363028276 EQSSDLTPS(ph)GDVS(ph)PVKPLSR ddPTM_KYSE-520_SHP099_60min_R1 1 EQSSDLTPSGDVSPVKPLSR 20 1 Q8WYQ5-3;Q8WYQ5 Q8WYQ5-3 DGCR8 Microprocessor complex subunit DGCR8 2 EQSSDLT(0.002)PS(0.998)GDVS(1)PVKPLSR 135.84 1.9154e-06 1036500000.0 839770.0 732710.0 676670.0 609520.0 705500.0 695400.0 640360.0 668630.0 857960.0 590670.0 True False 793186.284060008 697509.5117798676 720289.230910281 667448.5975411299 761018.8362541007 691059.7506544669 705093.8381113422 666310.6785894153 702176.0914115543 585437.1233343063 1.3548616110001437 1.1914336894238322 1.2303443054788465 1.1400858793165258 1.2999155774744586 1.1804166888471235 1.204388669607321 1.1381421710917488 1.1994047924606681 1.0 19.15915470626511 -13.999999999980137 0.1207893819791563 0.2985608937593823 1.3149592914182076 0.6168295721149184 0.05619226636859649 102.41843459629375 0.7991133953954627 17.47369144172231 0.5140054747105511 1.0000000000457367e-14 13.999999999980137 1.0163983976588253 EQSSDLTPSGDVS(ph)PVKPLSR ddPTM_KYSE-520_SHP099_60min_R1 8 EQSSDLTPSGDVSPVKPLSR 20 1 Q8WYQ5-3;Q8WYQ5 Q8WYQ5-3 DGCR8 Microprocessor complex subunit DGCR8 1 EQSSDLTPSGDVS(1)PVKPLSR;EQSSDLTPS(0.001)GDVS(0.998)PVKPLSR;EQSSDLTPSGDVS(1)PVKPLSR;EQSSDLTPS(0.001)GDVS(0.999)PVKPLSR;EQSSDLTPSGDVS(1)PVKPLSR;EQSSDLTPSGDVS(1)PVKPLSR;EQSSDLTPS(0.002)GDVS(0.998)PVKPLSR;EQSSDLTPSGDVS(1)PVKPLSR 262.63 1.8889999999999998e-35 34022400000.0 18822320.0 20297700.0 16357300.0 13320100.0 14000930.0 19296160.0 15153900.0 17775510.0 20707220.0 19286420.0 True False 17778208.388235334 19322568.024531174 17411717.73060537 14586038.29916592 15102723.536605418 19175725.507892895 16685804.09981176 17713850.904645216 16947310.83453676 19115557.323407706 0.930038715976398 1.0108294358161338 0.9108663397056219 0.7630454112527902 0.7900749782540515 1.0031476029428403 0.8728913218438773 0.9266719565091598 0.8865716310444244 1.0 24.188243927475657 -8.961957968582244 13.796617337674343 0.9999999999336341 0.8988217419517752 0.1391125247178434 0.07510548415832262 0.0 0.0 0.07826798633785811 0.018982774986787593 1.0915459721559148e-09 8.961957968582244 -0.10117825798185887 EQST(ph)PPKS(ph)PQ ddPTM_KYSE-520_SHP099_60min_R1 5 EQSTPPKSPQ 10 1 H0Y4V9;Q92615;A0A087X183 H0Y4V9 LARP4B La-related protein 4B 2 EQST(1)PPKS(1)PQ;EQST(1)PPKS(1)PQ;EQST(1)PPKS(1)PQ;EQS(0.005)T(0.995)PPKS(1)PQ;EQS(0.006)T(0.994)PPKS(1)PQ 153.49 0.00019869999999999998 3853270000.0 9601300.0 8893990.0 8681960.0 8444040.0 8975120.0 8485150.0 8256710.0 9099700.0 10738300.0 8740860.0 True False 9068696.74928296 8466709.370248836 9241613.033227159 9246559.022806805 9681410.882552661 8432191.031443413 9091378.824524166 9068135.264585938 8788495.410514122 8663422.780686181 1.0467798904493357 0.9772937999890887 1.0667392400414726 1.0673101448333606 1.1175041467600928 0.9733094234119262 1.0493980329335941 1.0467150794951394 1.014436860926004 1.0 23.046505692789474 -9.081565260980412 11.840524244242124 0.9999999997318668 1.0404920507054334 0.07911076950649976 0.04084478523991182 0.0 0.0 0.03987651814587112 0.009671476252781528 8.287713683033617e-10 9.081565260980412 0.04049205097356656 EQSTPPKS(ph)PQ ddPTM_KYSE-520_SHP099_60min_R1 5 EQSTPPKSPQ 10 1 H0Y4V9;Q92615;A0A087X183 H0Y4V9 LARP4B La-related protein 4B 1 EQST(0.011)PPKS(0.989)PQ;EQST(0.009)PPKS(0.991)PQ;EQST(0.018)PPKS(0.982)PQ;EQST(0.023)PPKS(0.977)PQ;EQS(0.001)T(0.395)PPKS(0.604)PQ 125.82 0.00067202 7774300000.0 13752540.0 12418610.0 12056020.0 11265240.0 11397670.0 13029400.0 12360840.0 13346750.0 16113100.0 13808540.0 True False 12989659.191191198 11822001.334886359 12833170.339514019 12335885.0225821 12294601.78512867 12948078.681589458 13610394.337373028 13300453.23940487 13187367.218196105 13686207.078481572 0.9491058491738346 0.8637894536517535 0.937671793647726 0.9013370141079815 0.8983206022404204 0.94606771674143 0.9944606463519216 0.9718144087061775 0.9635516357874069 1.0 23.706219345486723 -6.502197953686813 3.7301808883866094 0.9798012706152115 0.9088777624847394 0.6719889836525073 0.023773003148691386 0.13279942428169222 4.000008224293427 0.008682113382171307 0.007084777639587185 3.1463138809610294e-07 6.502197953686813 -0.0709235081304721 EQT(ph)PEKPR ddPTM_KYSE-520_SHP099_60min_R1 4 EQTPEKPR 8 1 F5H300;Q8WW22-2 F5H300 DNAJA4 1 EQT(1)PEKPR;EQT(1)PEKPR;EQT(1)PEKPR;EQT(1)PEKPR 111.86 0.0021646 1456950000.0 4072930.0 3485970.0 3298960.0 3075380.0 3338140.0 3390270.0 3206110.0 3471170.0 4151510.0 3441490.0 True False 3846996.4537153426 3318498.768652356 3511616.2401226307 3367663.1905532894 3600832.6265815184 3369110.0673731975 3530214.8874182603 3459129.321447165 3397700.4350505606 3411001.076038702 1.1278203577065344 0.9728811849295071 1.0294972536920968 0.9872946725845827 1.0556527383929393 0.9877188521106672 1.0349498017508705 1.0141097127604417 0.9961006635026959 1.0 21.70176377938996 -4.249771728891222 24.972718454073057 1.0107449275044633 1.1278204286389761 0.6867347997316486 0.024102377093163457 1002.3029428374427 2145229.5144949425 0.0055045694347285465 0.09092624204838211 5.6263697716063344e-05 4.249771728891222 0.11707550113451282 EQTLS(ph)PTITSGLHNIAR ddPTM_KYSE-520_SHP099_60min_R1 2 EQTLSPTITSGLHNIAR 17 0 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0Y8W8 D6REX3 SEC31A Protein transport protein Sec31A 1 EQT(0.053)LS(0.785)PT(0.161)IT(0.001)SGLHNIAR;EQT(0.024)LS(0.96)PT(0.016)ITSGLHNIAR 179.58 5.006699999999999e-09 1941290000.0 319450.0 424640.0 620160.0 804710.0 309790.0 402990.0 287070.0 323240.0 415670.0 422060.0 True False 301729.47169221315 404239.65700236504 660136.5058910837 881189.3964551161 334168.7105360142 400474.78992844943 316089.83713321097 322118.75588478305 340194.806187982 418320.87675771094 0.7212871469165837 0.9663387114109974 1.578062541385978 2.106491560461841 0.7988334532239059 0.9573387611740022 0.7556157358990438 0.7700279230179382 0.8132388916965788 1.0 18.67425047347841 EQTPS(ph)EAMSQKAKETVSTR ddPTM_KYSE-520_SHP099_60min_R1 1 EQTPSEAMSQKAKETVSTR 19 2 Q9BW04 Q9BW04 SARG Specifically androgen-regulated gene protein 1 EQT(0.014)PS(0.978)EAMS(0.004)QKAKET(0.001)VS(0.001)T(0.001)R 49.106 0.047192000000000005 1110200000.0 982740.0 1258600.0 1172300.0 1230100.0 892520.0 811950.0 587490.0 615520.0 1645200.0 613290.0 True False 928225.4531563796 1198134.966802884 1247868.333746319 1347008.3341569498 962756.2462558618 806882.3188724392 646879.2225498667 613384.9047834486 1346473.1521169853 607856.7277323994 1.5270464417151572 1.9710811974928844 2.052898778305002 2.2159964226799707 1.5838538957155412 1.327421877656108 1.0641968625781937 1.0090945395499231 2.2151159815899115 1.0 19.213371793915694 -5.99199509298549 4.268298280616021 1.3164227379424105 1.951706691611149 0.3882873804604796 0.3648961796279237 0.2141039113721545 9.420659478426511 0.11893405617512771 0.12951083161993587 1.0186028969983166e-06 5.99199509298549 0.6352839536687385 EQWLNNMQIPEKLEDLEVIQHR ddPTM_KYSE-520_SHP099_60min_R1 1 EQWLNNMQIPEKLEDLEVIQHR 22 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 103.95 0.00092827 289460000.0 91758.0 64598.0 53575.0 65840.0 89659.0 72156.0 62433.0 60193.0 66734.0 61725.0 False True 86668.00082496184 61494.615116425215 57028.5302230308 72097.41380448217 96714.6532100729 71705.64763909076 68744.33692736187 59984.204532151816 54616.7878272398 61178.164521323364 1.4166492490103084 1.0051726068864253 0.9321713174829521 1.1784827866052268 1.5808688274124905 1.1720790939077306 1.1236743937193696 0.9804838867181869 0.8927496968007822 1.0 15.900729203089771 -7.159870063436623 2.4537798763228653 0.9436893777733069 1.2050922456396733 0.2993652355034484 0.17554718659947915 0.4395169710358519 5.094846228981858 0.11561028765307928 0.055509025500666415 6.920379907904756e-08 7.159870063436623 0.26140286786636646 EQYGLGPYEAVT(ph)PLTK ddPTM_KYSE-520_SHP099_60min_R1 1 EQYGLGPYEAVTPLTK 16 0 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 EQYGLGPYEAVT(1)PLTK 197.0 1.0789999999999999e-11 363440000.0 493490.0 515100.0 418050.0 368570.0 426460.0 676010.0 402070.0 662150.0 680150.0 639230.0 True False 466115.12595207425 490353.8228191375 444998.17190364946 403598.7819853889 460019.9757745202 671790.7708368233 442715.1594250539 659853.1561969718 556651.905186219 633566.9195134153 0.7356999104531129 0.7739574269372103 0.7023696443075212 0.6370262864976538 0.7260795373088913 1.060331198088379 0.6987662167795359 1.0414892821483555 0.878600015312877 1.0 19.273137484254807 -6.160145492022419 8.16678867688889 0.9233442320608337 0.7121072686789746 0.5448594451059983 0.1006135875283722 0.2454303108861986 17.82621632304953 0.03177351168450141 0.031794906453474506 6.915992409915354e-07 6.160145492022419 -0.21123696338185916 EQYVPPRS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 15 EQYVPPRSPK 10 1 X6RLN4;Q71RC2-2;Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4 X6RLN4 LARP4 La-related protein 4 1 EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK;EQYVPPRS(1)PK 153.32 8.988799999999999e-05 39450360000.0 16830520.0 15314170.0 14724510.0 15029450.0 15951390.0 15585760.0 15073940.0 15831070.0 19388540.0 15998830.0 True False 15896897.504790189 14578454.286162201 15673675.474648986 16457844.4092311 17206673.642006077 15488483.490595868 16597760.962677391 15776155.713169515 15868069.88131917 15857092.8131014 1.0025102137042359 0.9193648834619442 0.9884331043139969 1.0378853553555132 1.085108969519913 0.9767542936873662 1.0467089496357138 0.9948958424544875 1.0006922497299569 1.0 23.91862496056415 -5.009487234168649 7.512363930047419 1.021468774021601 0.9590607233717421 0.32453392456391894 0.03467022297305267 0.13861906400221286 53.70488104258343 0.009146066798051158 0.017425984377265825 9.78391713611994e-06 5.009487234168649 -0.06240805064985899 ERAS(ph)LDK ddPTM_KYSE-520_SHP099_60min_R1 7 ERASLDK 7 1 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 ERAS(1)LDK;ERAS(1)LDK;ERAS(1)LDK;ERAS(1)LDK;ERAS(1)LDK;ERAS(1)LDK;ERAS(1)LDK 117.7 0.0017324000000000003 8209080000.0 6507630.0 5819890.0 5320060.0 5135130.0 5307350.0 5076320.0 5422880.0 5636380.0 6289880.0 5546050.0 True False 6146638.791261216 5540293.748567014 5662999.579996967 5623171.211266868 5725008.250309287 5044636.803914711 5971077.632608588 5616828.713320988 5147796.346971544 5496916.311761612 1.118197629843738 1.0078912310730634 1.0302138979049018 1.0229683139317787 1.0414945263146234 0.9177212309237508 1.0862595124165206 1.021814485569446 0.9364880334737743 1.0 22.390191084441966 -1.6340214420460815 1.3008754932881084 1.007439082257331 132.760039108184 0.3329926302283087 0.046605625335684034 1895.3142133673864 3.607635868444233 0.012854603870825996 744912.3067714578 0.023226221207117845 1.6340214420460815 131.75260002592668 ERDAAIMK ddPTM_KYSE-520_SHP099_60min_R1 1 ERDAAIMK 8 1 A0A0D2X7Z3;Q49AN0-2;Q49AN0 A0A0D2X7Z3 CRY2 Cryptochrome-2 0 60.43600000000001 0.037682 329870000.0 327340.0 329390.0 225820.0 224630.0 366740.0 353050.0 286240.0 283320.0 305520.0 289560.0 False True 309181.79766388785 313565.60997553 240376.71852477515 245978.76766252815 395600.3515348387 350846.4839927522 315175.9326331919 282337.22904738504 250045.26953244663 286994.72367427085 1.077308299280089 1.0925831874575374 0.8375649400356031 0.8570846338684107 1.3784237789118083 1.222484091348491 1.0981941709524448 0.9837714973736873 0.8712538904242694 1.0 18.130664687996532 -7.424349427124127 4.219726780718438 0.9330111872827258 1.0794324942102658 0.13731460796387762 0.1506316176971035 0.511865708464124 15.599652116708187 0.10226306847364232 0.04463339354825547 3.764008303974078e-08 7.424349427124127 0.14642130692753996 ERDAEQSGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 ERDAEQSGSPR 11 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 ERDAEQS(0.097)GS(0.903)PR;ERDAEQS(0.097)GS(0.903)PR;ERDAEQS(0.019)GS(0.981)PR;ERDAEQS(0.013)GS(0.987)PR;ERDAEQS(0.307)GS(0.693)PR;ERDAEQS(0.081)GS(0.919)PR;ERDAEQS(0.097)GS(0.903)PR 155.56 7.4643e-05 1906115000.0 2115472.0 1771712.0 1522147.0 1371974.0 1489367.0 1559545.0 1433400.0 1438502.0 1772231.0 1554463.0 True False 1998122.5510711214 1686596.2961260704 1620267.0311413098 1502365.9964609747 1606571.7095609645 1549811.301171157 1578302.0606358885 1433512.1723108918 1450438.5247079004 1540691.667173914 1.2968996935877972 1.0947007321846485 1.0516491168627924 0.9751243733386058 1.0427600432913966 1.005919181749046 1.0244113694279682 0.9304341698299562 0.941420373466701 1.0 20.55514673893335 -1.000000013970739 0.7077069342693758 0.9825590361467655 42.73370527932924 0.8904656666173041 0.03275236622194597 95.08931484576685 0.48843508828791865 0.013631385469035005 6289.973233327411 0.09999999678311851 1.000000013970739 41.751146243182475 ERDDILR ddPTM_KYSE-520_SHP099_60min_R1 2 ERDDILR 7 1 P18206-2;P18206 P18206-2 VCL Vinculin 0 ; 140.09 0.0024131 263630000.0 301360.0 243840.0 168006.0 184310.0 307610.0 265400.0 233310.0 293990.0 225260.0 239280.0 False True 284642.96005373396 232125.56038869795 178835.93557910426 201826.7669851779 331817.1569385172 263743.54015486833 256895.251686172 292970.2173077815 184358.46234249455 237160.16535702292 1.2002140394244962 0.9787712874936403 0.754072402124881 0.8510146157190698 1.399126857746101 1.112090387345727 1.083214170050184 1.2353264169247886 0.7773584660179325 1.0 17.855502182178977 -2.810174863023687 10.274198252955161 1.0440883825002503 1.1716130382251473 0.0 0.19796371647104555 0.0 0.0 0.04683332815912158 0.0 0.001548193133575966 2.810174863023687 0.12752465572489702 ERDEYKR ddPTM_KYSE-520_SHP099_60min_R1 1 ERDEYKR 7 2 H0Y4W3;A0A087WZ16;Q0D2I5-3;Q5TF58;Q0D2I5;Q0D2I5-7;Q0D2I5-4;Q0D2I5-5 H0Y4W3 IFFO2;IFFO1 Intermediate filament family orphan 1;Intermediate filament family orphan 2 0 82.45200000000001 0.0079083 256750000.0 87417.0 89004.0 47487.0 41658.0 102690.0 103870.0 58566.0 69888.0 78600.0 78120.0 False True 82567.80474853075 84728.11424227225 50548.0880018864 45617.16379506558 110771.11877382494 103221.70880137982 64486.42282907878 69645.57483998191 64328.221344757556 77427.91757644025 1.0663828672263616 1.094283778956407 0.6528405978629491 0.5891565371111822 1.4306353863187244 1.3331329581410323 0.8328575124781697 0.8994891896869722 0.8308143026221764 1.0 16.240566220946416 ERDFYFGK ddPTM_KYSE-520_SHP099_60min_R1 4 ERDFYFGK 8 1 Q15555-4;Q15555-5;Q15555-3;Q15555;Q15691 Q15555-4;Q15691 MAPRE2;MAPRE1 Microtubule-associated protein RP/EB family member 2;Microtubule-associated protein RP/EB family member 1 0 ;;; 152.34 0.00040719 1784620000.0 2507270.0 2395900.0 1580500.0 1577280.0 2332080.0 2384050.0 1701130.0 1856810.0 1968310.0 1917400.0 False True 2368186.734981167 2280797.3676807815 1682381.5588894128 1727184.2169734766 2515601.428279888 2369170.2596315555 1873096.821828888 1850369.1594927118 1610914.5210572474 1900413.3277146255 1.2461429839734235 1.2001585836190662 0.8852713956245453 0.9088466134104266 1.323712790051345 1.2466605159418882 0.9856260185679778 0.9736666926651714 0.847665346040527 1.0 20.857881798929398 -6.935872945083154 7.69751982198586 0.942068193352007 1.1249379314815464 0.2980981322453674 0.1386032073936549 0.3543083877072816 36.56241685731228 0.06459904727910847 0.04339921070023404 1.1591164115772978e-07 6.935872945083154 0.18286973812953944 ERDHS(ph)PT(ph)PSVFNSDEER ddPTM_KYSE-520_SHP099_60min_R1 1 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-3;Q6UN15-5 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERDHS(0.984)PT(0.401)PS(0.258)VFNS(0.357)DEER 83.54 0.0061953 768560000.0 380520.0 428000.0 407310.0 347830.0 435060.0 412480.0 409590.0 370380.0 543050.0 363960.0 True False 359411.79705218575 407438.2375589029 433565.85431904247 380887.6586210969 469296.7468472127 409905.5593183123 450995.35441318067 369095.23822734185 444445.80917647097 360735.59755659505 0.9963302748235109 1.1294650162574564 1.201893733958488 1.0558637994170794 1.300943821530077 1.1363047120793315 1.2502102855053692 1.0231738722969674 1.232054203097444 1.0 18.460582270404952 -4.284031393880926 3.6778590885428386 1.1565042661801013 0.9824358776008326 0.1857759264306793 0.09502619073999266 0.3728363134732366 9.438439346934883 0.02213419822662286 0.17117866345306826 5.199584088987214e-05 4.284031393880926 -0.17406838857926865 ERDHS(ph)PTPS(ph)VFNSDEER ddPTM_KYSE-520_SHP099_60min_R1 1 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-3;Q6UN15-5 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERDHS(0.982)PT(0.035)PS(0.604)VFNS(0.379)DEER 115.74 0.00011021 631810000.0 789710.0 1045000.0 858360.0 830100.0 905440.0 861130.0 832570.0 888800.0 1167700.0 810710.0 True False 745903.2120521441 994796.6314230214 913691.2590245585 908992.454421334 976692.976751116 855755.3682500456 916734.3007001689 885716.9602474787 955675.1153215452 803527.7401228356 0.9282855772199198 1.2380364507029296 1.1370998329004574 1.1312521136885403 1.2155062333029205 1.064997915466149 1.1408869351044775 1.102285479418643 1.1893492503139353 1.0 19.615988305240514 -8.984235639683744 11.597604520866279 0.9999999999465919 1.1315636566158545 0.17469219360140065 0.082734420797512 0.0 0.0 0.07410509181220148 0.01797312476104713 1.036965625904374e-09 8.984235639683744 0.1315636566692625 ERDHS(ph)PTPS(ph)VFNSDEERYR ddPTM_KYSE-520_SHP099_60min_R1 1 ERDHSPTPSVFNSDEERYR 19 2 Q6UN15;Q6UN15-3;Q6UN15-5 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 2 ERDHS(1)PT(0.076)PS(0.604)VFNS(0.32)DEERYR 72.399 0.0069175 480130000.0 127160.0 120800.0 120060.0 128970.0 100890.0 98524.0 104350.0 106160.0 158100.0 111750.0 True False 120106.18131282464 114996.58667550335 127799.25970279193 141227.27002375576 108829.4690144241 97909.07517037785 114898.71635785892 105791.75573793019 129393.02537666894 110759.98194018443 1.0843824566321039 1.0382503198457262 1.153839658188185 1.275074874064399 0.9825703029926197 0.8839751817877086 1.0373666945874875 0.955144212600745 1.1682290219814881 1.0 16.75707719801767 -5.826338782818996 24.999999197617125 0.9979166478081005 1.1319135870269026 0.352531396302194 0.0881037522262389 69.10966345084762 26621.026745108014 0.028219960185665315 0.03199843845389971 1.4916303701647016e-06 5.826338782818996 0.13399693921880207 ERDHS(ph)PTPSVFNSDEER ddPTM_KYSE-520_SHP099_60min_R1 2 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-3;Q6UN15-5 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 ERDHS(0.995)PT(0.005)PSVFNSDEER;ERDHS(1)PTPSVFNSDEER 264.59 9.881299999999999e-30 5381600000.0 618230.0 668380.0 595760.0 628110.0 587930.0 593550.0 669090.0 573360.0 745660.0 616510.0 True False 583935.5494890495 636270.0215411661 634163.6428497032 687805.3855518418 634196.7461358939 589845.4342838072 736728.1468891224 571371.1479832301 610266.9405589307 611048.2010375215 0.9556292752315834 1.0412763190544045 1.0378291626960576 1.1256155969103443 1.03788333728676 0.965300991447625 1.2056792666081078 0.9350672287604771 0.9987214421427569 1.0 19.220926662426812 ERDHSPTPS(ph)VFNSDEER ddPTM_KYSE-520_SHP099_60min_R1 1 ERDHSPTPSVFNSDEER 17 1 Q6UN15;Q6UN15-3;Q6UN15-5 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 ERDHS(0.189)PT(0.189)PS(0.623)VFNSDEER 57.788000000000004 0.03905 974010000.0 523370.0 522920.0 556740.0 485270.0 484410.0 502500.0 539170.0 539750.0 610220.0 504440.0 True False 494337.62278777105 497798.13828107825 592628.3512154957 531389.9148982539 522530.3110841231 499363.71110708953 593674.5653921111 537877.7332285967 499419.4303943755 499971.0540483815 0.9887324851809014 0.995653916862369 1.1853253231699048 1.06284135970566 1.0451211262193563 0.9987852437928673 1.1874178726648084 1.0758177475941377 0.9988966888192039 1.0 18.931485046544797 -4.569958133056516 24.999996128322156 1.073786008959224 0.9904607907229878 0.17890945081386855 0.06555890107552925 161.91024764387512 85976.56959070725 0.01658544775748278 0.04388099408618232 2.691794286310408e-05 4.569958133056516 -0.08332521823623618 ERDKEVS(ph)DDEAEEK ddPTM_KYSE-520_SHP099_60min_R1 11 ERDKEVSDDEAEEK 14 2 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK;ERDKEVS(1)DDEAEEK 234.8 2.0123999999999998e-18 17158140000.0 21576710.0 16991470.0 15262820.0 17990490.0 18304670.0 17903450.0 18921930.0 20287320.0 20054760.0 16840380.0 True False 20379806.884194996 16175174.276483575 16246685.798575444 19700300.760561954 19745143.389674503 17791707.92760241 20834743.344640754 20216948.022016075 16413321.12335863 16691187.334817369 1.2209920406131485 0.9690847003282143 0.9733690882903995 1.1802815680744088 1.1829681731800268 1.0659342304839743 1.2482481279914723 1.2112348640317554 0.9833525197527969 1.0 23.992583249297027 -3.9311050261048677 19.06958087623869 1.1028097129534375 3.6553573297620745 0.11621701469237611 0.10304005373140981 450.0978339968175 138017.61006125232 0.025886967351935613 5187.770875520579 0.00011719119260073547 3.9311050261048677 2.5525476168086367 ERDKEVS(ph)DDEAEEKEDK ddPTM_KYSE-520_SHP099_60min_R1 5 ERDKEVSDDEAEEKEDK 17 3 P07900;P07900-2;G3V2J8 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ERDKEVS(1)DDEAEEKEDK;ERDKEVS(1)DDEAEEKEDK;ERDKEVS(1)DDEAEEKEDK;ERDKEVS(1)DDEAEEKEDK;ERDKEVS(1)DDEAEEKEDK 302.71 3.7332e-38 10960000000.0 6838460.0 5281580.0 4678830.0 5345140.0 5640710.0 5544000.0 7502380.0 6218280.0 5954020.0 4745580.0 True False 6459116.991667967 5027844.968986802 4980434.868192687 5853140.4985250635 6084601.78575035 5509397.839557612 8260793.78657281 6196710.238037457 4872920.056629945 4703537.853205376 1.373246520651725 1.0689496132279273 1.0588699450560624 1.2444123298670284 1.2936223701492704 1.1713306050684926 1.7562936760343553 1.3174572909654614 1.0360116594595146 1.0 22.165314884251245 ERDLFK ddPTM_KYSE-520_SHP099_60min_R1 2 ERDLFK 6 1 Q14116-2;Q14116 Q14116-2 IL18 Interleukin-18 0 ; 94.40700000000001 0.015366 3924300000.0 7234100.0 6759700.0 4813100.0 3994400.0 6609600.0 7080000.0 4818300.0 5469400.0 6112700.0 6113700.0 False True 6832810.052179175 6434953.865483449 5123360.127232285 4374026.5750398515 7129737.916520342 7035811.09380735 5305380.786076395 5450427.927967559 5002787.768627222 6059537.374386619 1.1276124941585712 1.0619546456935307 0.8455035113552545 0.7218416695519789 1.1766142324094593 1.1611135733806006 0.8755422168863899 0.8994792161867443 0.8256055635160816 1.0 22.530776222237662 ERDQRPS(ph)SPIR ddPTM_KYSE-520_SHP099_60min_R1 3 ERDQRPSSPIR 11 2 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 ERDQRPS(0.5)S(0.5)PIR;ERDQRPS(0.5)S(0.5)PIR;ERDQRPS(0.822)S(0.178)PIR 109.44 0.00024298 3471770000.0 1025280.0 922760.0 899760.0 812630.0 879010.0 887210.0 723720.0 815320.0 1009180.0 857000.0 True False 968405.6745549927 878429.2245090018 957759.9692668997 889862.1108738823 948183.0861172462 881672.5932961606 796880.6804265413 812491.8452171189 825938.351357537 849407.646735911 1.1400953102745957 1.0341668430754236 1.127562216972455 1.0476266775951795 1.1162874383823924 1.0379852320428675 0.9381604739359017 0.9565393581507635 0.9723698091622304 1.0 19.69609757094685 -6.566648773899312 4.1701364867697395 0.96385483058866 1.088731240598656 0.749116985862524 0.03434888991903657 0.09921632210314935 3.7412649755503855 0.012498937079951889 0.009727923888317903 2.712384326231912e-07 6.566648773899312 0.12487641000999605 ERDSASFNPELLTHILDGS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 4 ERDSASFNPELLTHILDGSPEK 22 1 Q15067-2;Q15067;I3L2U4;K7ELT1;I3L0T4 Q15067-2 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 1 ERDSASFNPELLTHILDGS(1)PEK;ERDSASFNPELLTHILDGS(1)PEK;ERDSASFNPELLTHILDGS(1)PEK;ERDSASFNPELLTHILDGS(1)PEK 250.24 1.5939e-27 540404000.0 433936.0 459752.0 451828.0 488035.0 429679.0 434473.0 396680.0 388574.0 565081.0 366399.0 True False 409864.7050500297 437664.823818179 480953.5558303608 534417.6996669264 463492.29276091483 431761.2928474242 436780.2856237224 387226.1274878533 462476.53493278497 363152.9899141082 1.128628199225262 1.2051802848207147 1.3243827510386585 1.4716048456418471 1.2763003627494258 1.188923965487777 1.2027445670405421 1.0662892451455206 1.2735033106630032 1.0 18.470217932552092 -6.5790570490442954 1.9283853464256586 1.1342580768453974 1.2882163013944463 0.2986416753956531 0.10649464834361183 0.47262274340624116 3.5637071956391724 0.05235585077614552 0.03822115420783162 2.635985099343738e-07 6.5790570490442954 0.15395822454904895 ERDSELS(ph)DTDSGCCLGQSESDK ddPTM_KYSE-520_SHP099_60min_R1 1 ERDSELSDTDSGCCLGQSESDK 22 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 ERDS(0.105)ELS(0.894)DT(0.001)DSGCCLGQSESDK 119.66 1.0964e-05 515630000.0 1072800.0 1131100.0 1012000.0 935560.0 1034800.0 1007500.0 834340.0 952470.0 1447600.0 947160.0 True False 1013289.6454262194 1076760.2581842872 1077235.1392572508 1024475.3411136301 1116232.8727933979 1001211.8187868516 918683.2295737036 949166.1038781696 1184752.33102635 938768.8992793295 1.0793813538178543 1.1469918304823374 1.147497685622328 1.0912966353061924 1.189039042143709 1.0665157522319477 0.9786042446431223 1.011075361153125 1.2620276746874082 1.0 19.840410521667827 -6.433437118546605 10.024416287779713 1.0579934394602484 1.1303367452152884 0.15376541333838223 0.07850868728267606 0.9158631653283701 97.96067548265562 0.0274877833165669 0.024222524899636135 3.6860640847290724e-07 6.433437118546605 0.07234330575504 ERDVIMR ddPTM_KYSE-520_SHP099_60min_R1 2 ERDVIMR 7 1 P60842;P60842-2;J3KT12;J3KSZ0;Q14240-2;Q14240;E7EQG2;J3QL52 P60842 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 ; 62.107 0.042433 4982900000.0 10994500.0 10509900.0 3583350.0 4171900.0 13457400.0 15787100.0 6929200.0 8071100.0 7466100.0 17424100.0 False True 10384613.168007614 10004988.628318474 3814338.4745627143 4568396.121672529 14516420.817868093 15688566.852972588 7629671.158475088 8043103.237908893 6110444.445064813 17269736.029744674 0.6013185812522895 0.5793365116343584 0.22086837158327474 0.2645319021555462 0.8405699307080093 0.9084427709810534 0.441794312624933 0.4657339998744502 0.3538238473674663 1.0 24.041742695457714 -5.753927630730072 24.999031893126713 0.6423532882881051 0.41416938454615654 0.2235211359959235 0.2268774938607155 321.98444448695835 1071555.5848318832 0.0723363806375909 0.09153675136191192 1.762269680225e-06 5.753927630730072 -0.22818390374194858 ERDVYEELLTQAEIQGNINK ddPTM_KYSE-520_SHP099_60min_R1 2 ERDVYEELLTQAEIQGNINK 20 1 P46940;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 0 ; 178.77 2.0129e-09 473610000.0 501080.0 356710.0 234736.0 376490.0 442500.0 328320.0 291510.0 324760.0 348460.0 243640.0 False True 473284.0935217846 339573.11616737396 249867.45815087913 412271.4964041539 477322.2325194041 326270.8330958798 320978.67566343484 323633.4833595536 285188.44796175853 241481.53914905168 1.9599183241483957 1.4062073538374145 1.0347269568985618 1.7072588565442433 1.9766406748997176 1.3511212254386573 1.329205854801656 1.3401996877276594 1.1809948245597741 1.0 17.8815533761433 -7.490991726791849 0.8858946430218491 1.0235302147804672 1.5664207096373468 0.3493151735984217 0.2656610827562151 0.7393667909759667 1.105288231066632 0.26438569747880974 0.10348027138678217 3.2285556243552134e-08 7.490991726791849 0.5428904948568796 ERDWDRPR ddPTM_KYSE-520_SHP099_60min_R1 1 ERDWDRPR 8 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 0 105.52 0.0020725 0.0 77633.0 77507.0 51894.0 54907.0 93960.0 75425.0 53223.0 61692.0 66146.0 76942.0 False True 73326.54273245129 73783.44737962114 55239.17027333577 60125.34477160846 101354.11744073035 74954.24459751688 58603.300246423794 61478.00485102106 54135.553804965995 76260.35373997017 0.9615290139156384 0.9675203924598265 0.7243497776274198 0.7884220544874695 1.3290538591825052 0.9828730253873879 0.7684635249168557 0.8061594503042375 0.7098780840901351 1.0 16.218645602689495 -6.758841228159845 24.96683033482377 0.8049718750599769 0.9577541229020661 0.14153462534818617 0.16436791356201186 135.19925776259456 1299209.913814244 0.0690475347843343 0.0509768907431009 1.74244376944143e-07 6.758841228159845 0.15278224784208916 ERECSPS(ph)SPLPPLPEDEEGSEVTNSK ddPTM_KYSE-520_SHP099_60min_R1 1 ERECSPSSPLPPLPEDEEGSEVTNSK 26 1 Q96GY3 Q96GY3 LIN37 Protein lin-37 homolog 1 ERECS(0.004)PS(0.592)S(0.404)PLPPLPEDEEGSEVTNSK 157.73 6.115700000000001e-08 475440000.0 195680.0 234100.0 172230.0 180010.0 186240.0 217010.0 187410.0 223080.0 248040.0 186840.0 True False 184825.2403215909 222853.48460873618 183332.2213777433 197118.0962780202 200896.02843935322 215655.56009422755 206355.23174534136 222306.1875472636 203002.18857956302 185184.74295932063 0.9980586811203519 1.2034116906579622 0.9899963595705923 1.0644402618055904 1.084841144194497 1.1645428054599531 1.1143209124450995 1.2004562794684301 1.0962144361112747 1.0 17.49860571685982 -6.062633939698528 6.861936052060561 1.1275334743731211 1.0693108095143293 0.08504801507718496 0.07313361086112671 0.53021511063794 48.97059624010237 0.02291121663282181 0.023090495700791046 8.656972946009075e-07 6.062633939698528 -0.058222664858791795 ERECSPSS(ph)PLPPLPEDEEGSEVTNSK ddPTM_KYSE-520_SHP099_60min_R1 1 ERECSPSSPLPPLPEDEEGSEVTNSK 26 1 Q96GY3 Q96GY3 LIN37 Protein lin-37 homolog 1 ERECS(0.002)PS(0.22)S(0.778)PLPPLPEDEEGSEVTNSK 123.51 0.000134 547320000.0 337080.0 344100.0 303170.0 284360.0 302150.0 325610.0 229890.0 343080.0 400860.0 340320.0 True False 318381.50044767925 327568.9194953703 322712.82328915055 311385.4889040488 325927.4860016676 323577.7472111032 253129.52471018897 341889.9355554736 328073.9288582632 337305.0295649538 0.9438978744500739 0.9711355917753706 0.9567388417106503 0.9231569695407884 0.9662692739033254 0.9593030605812322 0.7504469323705847 1.0135927590419664 0.9726327807249224 1.0 18.3636943050203 EREDKEETIDILR ddPTM_KYSE-520_SHP099_60min_R1 1 EREDKEETIDILR 13 2 A0A087X211;Q8TCG1-2;Q8TCG1 A0A087X211 KIAA1524 Protein CIP2A 0 207.52 2.1269e-10 251820000.0 278900.0 289430.0 213110.0 177790.0 326250.0 272140.0 240440.0 276150.0 273360.0 233390.0 False True 263428.8610266336 275525.348356713 226847.4115880561 194687.10814548752 351924.0188914253 270441.47331479244 264746.02166826656 275192.10010389483 223724.71484482067 231322.3461746724 1.1387955611850722 1.1910883358785527 0.9806549835732806 0.8416268958230197 1.5213576410196277 1.1691108869809796 1.144489609613227 1.1896477130492884 0.9671556533318457 1.0 17.819545114203272 -7.767428854935785 24.58747362456826 0.9835777030315338 1.1459547774584513 0.1385459050829131 0.1630772541215884 268.16204010304557 1100768.9202278017 0.14803162170968734 0.042265142303789624 1.7083275511969206e-08 7.767428854935785 0.1623770744269175 EREDS(ph)GDAEAHAFK ddPTM_KYSE-520_SHP099_60min_R1 2 EREDSGDAEAHAFK 14 1 Q9NPI1-2;Q9NPI1 Q9NPI1-2 BRD7 Bromodomain-containing protein 7 1 EREDS(1)GDAEAHAFK;EREDS(1)GDAEAHAFK 105.79 0.00040459 1409960000.0 1676990.0 1492630.0 1396350.0 1336320.0 1409690.0 1379650.0 1399210.0 1535960.0 1851710.0 1394710.0 True False 1583964.0217033147 1420921.8143166923 1486360.9552389926 1463323.4510207416 1520624.582961083 1371039.092594816 1540655.801773646 1530632.1132557583 1515486.1418104467 1382353.9544679613 1.1458454736456762 1.027900133481786 1.075239051789063 1.0585736354217208 1.1000254877169566 0.9918147867725381 1.1145161460232604 1.1072649724106776 1.0963083202476351 1.0 20.398695637274503 EREDSGDAEAHAFKS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 EREDSGDAEAHAFKSPSK 18 2 Q9NPI1-2;Q9NPI1 Q9NPI1-2 BRD7 Bromodomain-containing protein 7 1 EREDSGDAEAHAFKS(0.969)PS(0.031)K 123.14 3.3178e-05 257570000.0 230940.0 221300.0 185700.0 282550.0 234750.0 183830.0 200600.0 218400.0 248870.0 197350.0 True False 218129.2978325236 210668.41582192786 197670.5191305053 309403.4670482447 253223.48945520914 182682.64878172395 220878.60566733588 217642.42137494328 203681.48150216028 195601.63253597656 1.115171151715227 1.077027901508849 1.0105770415497335 1.5818041139883474 1.294587811830427 0.9339525770477582 1.1292268004292356 1.1126820290465256 1.0413076765333111 1.0 17.57755888584009 -6.251622983629664 24.984835480349457 1.055838502377434 1.217050727705059 0.23566177095276708 0.15442686472590816 1239.4673749132603 3154713.310834007 0.05574768506308791 0.05510197591896088 5.602437449225245e-07 6.251622983629664 0.16121222532762514 EREDSGDAEAHAFKS(ph)PSKENK ddPTM_KYSE-520_SHP099_60min_R1 4 EREDSGDAEAHAFKSPSKENK 21 3 Q9NPI1-2;Q9NPI1 Q9NPI1-2 BRD7 Bromodomain-containing protein 7 1 EREDSGDAEAHAFKS(0.972)PS(0.028)KENK;EREDSGDAEAHAFKS(0.999)PS(0.001)KENK;EREDSGDAEAHAFKS(0.997)PS(0.003)KENK;EREDSGDAEAHAFKS(0.999)PS(0.001)KENK 214.47 3.6475e-19 9175000000.0 5488410.0 5294260.0 5203780.0 5615290.0 4699140.0 4948120.0 4181490.0 4073070.0 6854260.0 3630310.0 True False 5183956.956425909 5039915.802753731 5539223.985142391 6148965.473301497 5068935.583550812 4917236.947668082 4604195.816609717 4058941.4708316876 5609699.16583356 3598148.2777384436 1.4407291073852573 1.4006970846464077 1.5394651797462828 1.7089249799250428 1.4087622833422548 1.3666020875489684 1.2796014675369654 1.1280639811161055 1.559051693489253 1.0 21.778823209818547 -6.383972724785194 2.0043080740588226 1.2535749849231688 1.5138917346687326 0.388683541572313 0.15413960608917518 0.3704554166814797 2.935144755158914 0.0642614937631813 0.05419799673686798 4.130734436348051e-07 6.383972724785194 0.26031674974556385 EREEIEK ddPTM_KYSE-520_SHP099_60min_R1 2 EREEIEK 7 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 0 ; 122.52 0.0026483 94075000.0 155091.0 158981.0 103749.0 99480.0 150222.0 151412.0 112697.0 152453.0 155689.0 140835.0 False True 146487.7930637566 151343.3141246541 110436.82654426925 108934.54929024733 162043.61675373986 150466.98154457027 124089.51257672874 151924.17612579756 127419.80220030485 139587.3114679721 1.049434877161939 1.0842197083176819 0.7911666567889207 0.7804043802021507 1.1608764081033276 1.0779416836830078 0.8889741572621429 1.0883809891320684 0.9128322686374037 1.0 17.09080828049581 EREELRR ddPTM_KYSE-520_SHP099_60min_R1 1 EREELRR 7 2 Q9NWH9;Q9NWH9-3;H7C3F4;Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0;Q14151 Q9NWH9;Q15424-2;Q14151 SLTM;SAFB;SAFB2 SAFB-like transcription modulator;Scaffold attachment factor B1;Scaffold attachment factor B2 0 103.83 0.005573300000000001 0.0 133060.0 136280.0 99624.0 87861.0 166780.0 136740.0 107570.0 134080.0 142320.0 112080.0 False True 125678.89655146615 129732.90423954974 106045.92244403587 96211.28302362704 179904.6371516072 135886.55493887246 118444.22538203045 133614.9077745074 116478.27559524047 111087.05839692056 1.1313549783846837 1.1678489475885343 0.9546199528042913 0.8660890333404859 1.619492313036118 1.223243795450428 1.0662288397161648 1.2027945442311876 1.0485314606050398 1.0 16.761331227490444 -3.9396367354613337 14.573578816166357 1.1375946178181715 1.0840999716890585 0.0 0.19592859279522612 26646368.18386806 168523805.11145052 0.0503931974169688 41151798.8003774 0.0001149114393498115 3.9396367354613337 -0.05349464612911303 EREELWK ddPTM_KYSE-520_SHP099_60min_R1 2 EREELWK 7 1 Q16537;Q16537-2;Q16537-3 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 0 ; 114.5 0.0032955 387130000.0 656290.0 538850.0 360980.0 385010.0 553150.0 523170.0 427150.0 468580.0 489690.0 487360.0 False True 619884.2854183202 512962.8371696601 384249.3483884217 421601.23464252235 596679.7580070243 519904.7019699424 470330.4905822654 466954.6053473941 400774.6400803353 483042.3695603423 1.283291745157944 1.0619417042785522 0.7954775245454339 0.8728038391875589 1.235253459339629 1.0763128345100486 0.9736837184910984 0.9666949211358188 0.829688377947289 1.0 18.881790213546918 -4.33753684818661 3.7616139238970305 0.9754889353690497 1.2942830898570978 0.3823026362961438 0.12001177930539214 0.2589344185982591 6.211481736012195 0.03272219738386527 0.19297988621307055 4.596879841503462e-05 4.33753684818661 0.31879415448804815 EREES(ph)EDELEEANGNNPIDIEVDQNK ddPTM_KYSE-520_SHP099_60min_R1 8 EREESEDELEEANGNNPIDIEVDQNK 26 1 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK;EREES(1)EDELEEANGNNPIDIEVDQNK 257.25 3.7113999999999995e-38 16622520000.0 8624450.0 8123470.0 7947230.0 7701710.0 8164700.0 7665030.0 7753790.0 8023330.0 9950540.0 7558040.0 True False 8146034.56608516 7733206.307622943 8459521.161817597 8433678.202796457 8807215.439211698 7617189.704571494 8537618.76289797 7995498.940889291 8143772.768700557 7491081.645666134 1.0874310214998044 1.0323217224707313 1.1292789962730871 1.1258291661626263 1.1756934253022053 1.0168344259040774 1.1397044067510993 1.0673357091916067 1.08712908948363 1.0 22.83674261540113 -8.65883570136823 0.8066299318773466 0.9988822802454342 1.1003052747925985 0.2870327072437956 0.04609475558414536 3.2905483250529763 2.963474388012702 0.05389462779231001 0.015784254473087234 2.193634655787384e-09 8.65883570136823 0.1014229945471643 EREKEIS(ph)DDEAEEEKGEK ddPTM_KYSE-520_SHP099_60min_R1 6 EREKEISDDEAEEEKGEK 18 3 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 EREKEIS(1)DDEAEEEKGEK;EREKEIS(1)DDEAEEEKGEK;EREKEIS(1)DDEAEEEKGEK;EREKEIS(1)DDEAEEEKGEK;EREKEIS(1)DDEAEEEKGEK;EREKEIS(1)DDEAEEEKGEK 137.52 1.0754e-05 10677690000.0 5087670.0 5026280.0 5205520.0 3730180.0 4137070.0 4110650.0 3467790.0 3590430.0 6221740.0 3117680.0 True False 4805446.803081294 4784809.96419991 5541076.148326489 4084695.1856804886 4462633.872291637 4084993.908581805 3818348.0555689437 3577975.63634266 5092028.853301935 3090059.7807183354 1.5551306913435143 1.5484522319136498 1.7931938349226288 1.3218822532717907 1.4441901416076242 1.3219789254796166 1.2356874386039567 1.1578985166141027 1.6478738971574876 1.0 21.55920331829901 -5.286724974224166 22.299382816493676 1.3145118734310972 1.6238781578432524 0.4312367024928142 0.1722784448527799 181.5364723973602 160096.57074510035 0.046737953945388974 0.06937895664958954 5.167435039675861e-06 5.286724974224166 0.3093662844121552 EREKEPS(ph)RER ddPTM_KYSE-520_SHP099_60min_R1 4 EREKEPSRER 10 3 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 EREKEPS(1)RER;EREKEPS(1)RER;EREKEPS(1)RER;EREKEPS(1)RER 113.25 0.00081559 12878360000.0 1792260.0 1628000.0 1709700.0 1664740.0 1614460.0 1452230.0 1539520.0 1386320.0 2002250.0 1055515.0 True False 1692839.7650182692 1549788.436322181 1819909.9976167204 1822956.3890776697 1741508.816979155 1443166.093892634 1695149.7058672842 1381511.1794895215 1638691.872615024 1046163.9582782451 1.6181400167946043 1.4814010978477892 1.7396030356579006 1.742514999348528 1.6646614550221115 1.3794836674241453 1.620348027145885 1.320549392432888 1.5663815022952512 1.0 19.99667754257075 -9.221097729928008 0.32573029417246296 0.8316856831988327 1.6592374654801159 0.6865546671460336 0.12156679430957432 3.7715686583247723 0.5045441251253224 0.8948966849719251 0.12625243182818557 6.010384696905042e-10 9.221097729928008 0.8275517822812831 ERENMDT(ph)DDER ddPTM_KYSE-520_SHP099_60min_R1 2 ERENMDTDDER 11 1 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 1 ERENMDT(1)DDER;ERENMDT(1)DDER 122.93 0.0075133 59504000.0 397320.0 351460.0 328160.0 336470.0 351180.0 337470.0 327940.0 334140.0 405090.0 366550.0 True False 375279.86756221636 334575.3340477845 349313.7186745649 368448.0076366054 378815.8680591282 335363.72455185937 361091.37558597315 332980.94632886245 331535.86748788564 363302.6521715848 1.032967596903132 0.9209273096354039 0.961495096682055 1.0141627247537695 1.0427005302461063 0.9230973750047657 0.9939134036803914 0.9165387159673097 0.9125610988694464 1.0 18.470812372149545 -6.290618871572314 24.996410521739776 0.9467989956865813 0.9896302930170856 0.21163837383183837 0.04302081362208762 1266.5173300115407 1084949.321547123 0.015572458818860716 0.013736432710226634 5.121310747039888e-07 6.290618871572314 0.04283129733050428 ERES(ph)SNPSDR ddPTM_KYSE-520_SHP099_60min_R1 3 ERESSNPSDR 10 1 Q9Y388 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 ERES(0.492)S(0.492)NPS(0.016)DR;ERES(0.495)S(0.495)NPS(0.01)DR;ERES(0.497)S(0.309)NPS(0.194)DR 109.16 0.0031428000000000003 344692000.0 887826.0 693226.0 591013.0 755936.0 735320.0 789833.0 744702.0 736134.0 891652.0 868071.0 True False 838576.521942747 659922.3824065606 629110.6436342341 827779.9301595538 793185.5006015103 784903.3592733253 819983.7457511292 733580.5229689664 729750.4735177578 860380.5662890184 0.9746576745215012 0.7670121900276394 0.7312004341842651 0.9621090510329897 0.9219007630805367 0.9122746259353111 0.9530477301316461 0.8526233061411833 0.8481717301743664 1.0 19.714615412918036 -5.277224278642186 24.96309144001193 0.9162595010180885 0.8185622985492298 0.2661849943749093 0.07338700375551621 1044.2966039779556 1651504.4238814719 0.02081733090459802 0.03099345173980924 5.281724221839313e-06 5.277224278642186 -0.09769720246885871 EREVDEDS(ph)EPER ddPTM_KYSE-520_SHP099_60min_R1 8 EREVDEDSEPER 12 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER;EREVDEDS(1)EPER 230.86 1.3304e-11 7977600000.0 5847500.0 5421790.0 5124370.0 5382047.0 5657020.0 5362600.0 5370730.0 5737860.0 6596210.0 5568314.0 True False 5523127.518297752 5161319.070127295 5454695.089481888 5893555.1287085675 6102195.289959136 5329130.024244529 5913655.801673628 5717956.702886587 5398504.540922432 5518983.070042733 1.0007509441870759 0.935193858111859 0.9883514807447403 1.067869760409128 1.1056738555843926 0.9655999948924043 1.0715118576415272 1.0360525898192896 0.9781701578730576 1.0 22.39597102926892 -5.0573979015126485 6.276167401912686 1.0352879842718512 0.9663494618842258 0.2736197609729586 0.043422520974486574 0.25143415477880254 21.368264484004385 0.011722149990659455 0.020913094536347362 8.761976791334284e-06 5.0573979015126485 -0.06893852238762543 EREVDEDS(ph)EPEREVR ddPTM_KYSE-520_SHP099_60min_R1 2 EREVDEDSEPEREVR 15 2 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EREVDEDS(1)EPEREVR;EREVDEDS(1)EPEREVR 110.34 0.00056676 1055770000.0 674990.0 709290.0 758790.0 483710.0 609850.0 536050.0 453730.0 528380.0 917560.0 529260.0 True False 637546.9591407945 675214.6437340045 807702.817506926 529681.6529672849 657841.7254281553 532704.3131123486 499597.4563780674 526547.1731048193 750954.23380529 524571.1681580497 1.2153679001830042 1.2871745241068355 1.5397392509066963 1.0097422144399966 1.2540561993486308 1.0155043689931667 0.9523921380054614 1.0037668958317096 1.4315583459192949 1.0 19.000778989819956 -5.27900087221796 24.8323500216963 1.0927824997636215 1.3414019792781606 0.34963618150265063 0.1574962315446947 820.5753465530433 1160310.341608044 0.04449200685373148 0.06616863657281889 5.260162099617958e-06 5.27900087221796 0.2486194795145391 ERFQNLDKK ddPTM_KYSE-520_SHP099_60min_R1 1 ERFQNLDKK 9 2 C9JEY1;C9K057;A0A1W2PNV4;O15143 C9JEY1 ARPC1B Actin-related protein 2/3 complex subunit 1B 0 118.4 0.00052637 453590000.0 997470.0 930930.0 753650.0 623920.0 1063200.0 1008900.0 750980.0 865600.0 991770.0 804020.0 False True 942138.3506928518 886206.725445581 802231.4848826351 683217.1692116113 1146867.7912195034 1002603.0808675467 826896.3872585034 862597.4356325595 811689.5684871528 796897.0083180943 1.1822586116633809 1.1120718439086388 1.0066940602221603 0.8573468868374696 1.4391668926453198 1.2581338245749085 1.037645239757801 1.0824453180632845 1.0185627000912945 1.0 19.60403375550326 -6.891446556789406 18.05489756937619 1.0413789315912536 1.1366132989639908 0.11710322916492433 0.14415352999307432 4.4590395041969755 716.3843468363698 0.06561850786412582 0.04424004141061621 1.2839657624194393e-07 6.891446556789406 0.09523436737273716 ERFS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 7 ERFSPPR 7 1 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 1 ERFS(1)PPR;ERFS(1)PPR;ERFS(1)PPR;ERFS(1)PPR;ERFS(1)PPR;ERFS(1)PPR;ERFS(1)PPR 92.538 0.0045284 38786770000.0 2410270.0 2011340.0 2092840.0 2104230.0 2131080.0 2190590.0 2151480.0 2347210.0 2246100.0 2249960.0 True False 2276567.518345878 1914712.207317112 2227747.815062395 2304215.386540181 2298783.8718134467 2176917.715251899 2368972.5948213334 2339068.076352931 1838264.859573283 2230027.1048423923 1.0208698869186055 0.858604903572432 0.9989779093827837 1.0332678833977813 1.0308322561738164 0.9761844196982319 1.0623066372947791 1.0488967023197888 0.8243239983862003 1.0 21.088629814798928 -4.952479559202486 24.997256178668426 1.0029963795721284 0.9370006948260634 0.08469049719471855 0.07290224072420383 239.71134515168018 126093.10802591035 0.018408881108831834 0.03832113587271884 1.115630659141531e-05 4.952479559202486 -0.06599568474606499 ERFS(ph)PPRHELS(ph)PPQK ddPTM_KYSE-520_SHP099_60min_R1 4 ERFSPPRHELSPPQK 15 2 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 2 ERFS(1)PPRHELS(1)PPQK;ERFS(1)PPRHELS(1)PPQK;ERFS(1)PPRHELS(1)PPQK;ERFS(1)PPRHELS(1)PPQK 119.79 7.498800000000001e-05 5944600000.0 2040290.0 1840880.0 1769980.0 1831020.0 1812530.0 1770070.0 1702730.0 1649740.0 2263150.0 1621490.0 True False 1927111.0464827183 1752441.3615827844 1884075.7428681317 2005039.5902837624 1955165.7991150154 1759022.3365558728 1874858.5654433833 1644017.4369922103 1852219.0093688034 1607124.8601001296 1.1991047455781703 1.090420169017609 1.1723269234667597 1.2475941602688179 1.2165612315854548 1.0945150437448148 1.1665917266232648 1.0229556382382028 1.1525047339840189 1.0 20.616050587976005 -7.633744805899215 0.6284228636692352 1.0115272772540493 1.1797116053196162 0.44596865009009734 0.057908122657874796 0.6885560321939938 0.618335014775305 0.058099964854156146 0.027480546614735552 2.3241020518192942e-08 7.633744805899215 0.16818432806556682 ERFS(ph)PPRHELS(ph)PPQKR ddPTM_KYSE-520_SHP099_60min_R1 8 ERFSPPRHELSPPQKR 16 3 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 2 ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR;ERFS(1)PPRHELS(1)PPQKR 111.6 0.00048591 91244550000.0 4947350.0 4724560.0 4903890.0 4412700.0 3877963.0 4018700.0 3675900.0 3952261.0 6079290.0 3422490.0 True False 4672910.633202278 4497585.045890859 5220002.595901424 4832081.681273373 4183136.6255088034 3993617.802638921 4047495.84532682 3938551.529055648 4975444.18242966 3392169.4012569254 1.3775581583486929 1.3258727716323178 1.5388390078535636 1.4244812418515733 1.233174446995128 1.1773049427187028 1.1931880064206322 1.1610715925909443 1.4667440195015238 1.0 21.69377678764828 -5.789579194483103 5.489399243650147 1.209680310092859 1.4196213189719091 0.4365225983214527 0.11778814619408928 0.17528011788003092 14.34718648544725 0.035681541705886485 0.04203310067223504 1.623382296422881e-06 5.789579194483103 0.2099410088790501 ERFS(ph)PPRHELSPPQK ddPTM_KYSE-520_SHP099_60min_R1 4 ERFSPPRHELSPPQK 15 2 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 1 ERFS(1)PPRHELSPPQK;ERFS(0.999)PPRHELS(0.001)PPQK;ERFS(1)PPRHELSPPQK;ERFS(1)PPRHELSPPQK 110.77 0.00012498 7683200000.0 4764610.0 4854270.0 4655630.0 6683800.0 4603360.0 4924540.0 4710730.0 4768300.0 5885710.0 4303640.0 True False 4500307.585285437 4621063.5827921815 4955739.35907138 7319026.342442246 4965618.242464454 4893804.119194638 5186936.560694369 4751759.880229582 4817013.430674978 4265513.09778126 1.0550448403560895 1.083354681338539 1.1618155296836734 1.715860712337115 1.1641315191476869 1.1472955320991018 1.2160170281489453 1.1139949101788593 1.1292928471326429 1.0 22.024287862825734 -7.726973428835079 0.8925414627696361 1.01007872220816 1.234981657867772 0.13605984453133524 0.17497038078274393 1.1948177876012476 2.0129426249059694 0.1774582550603964 0.06534836536814197 1.875109228181269e-08 7.726973428835079 0.22490293565961195 ERFS(ph)PPRHELSPPQKR ddPTM_KYSE-520_SHP099_60min_R1 3 ERFSPPRHELSPPQKR 16 3 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 1 ERFS(1)PPRHELSPPQKR;ERFS(1)PPRHELSPPQKR;ERFS(1)PPRHELSPPQKR 188.19 2.6002e-12 7862700000.0 2291650.0 2506910.0 2974150.0 3447340.0 2123550.0 2118440.0 1957570.0 1884710.0 3067150.0 1548900.0 True False 2164527.606208983 2386474.2806513743 3165868.4678082503 3774974.157119434 2290661.30365329 2105218.030164584 2155460.2796421093 1878172.3809046217 2510232.876559452 1535177.9510259647 1.4099522500062105 1.554526157085884 2.0622159572396734 2.4589814845872464 1.4921145148824169 1.3713185684810414 1.4040458815876087 1.2234232387518547 1.6351413039002123 1.0 20.549974465429504 -5.982063893502853 24.98931007778096 1.355149293493001 1.876554213506977 0.4179408286107199 0.3032559797419871 261.019431093809 363660.98881538474 0.09965864660690182 0.11298284733098461 1.0421640946958623e-06 5.982063893502853 0.5214049200139761 ERGDYVLAVK ddPTM_KYSE-520_SHP099_60min_R1 2 ERGDYVLAVK 10 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-2 FLNB Filamin-B 0 ; 107.11 0.0011605 185170000.0 691060.0 602120.0 402480.0 392870.0 594550.0 615620.0 410850.0 515940.0 514140.0 514720.0 False True 652725.524206043 573193.2513994543 428424.50479076884 430208.24667932733 641337.7024732463 611777.6872273564 452382.7275095961 514150.32456130115 420785.1364146769 510159.9812461004 1.2794526191798044 1.12355588927103 0.8397846176493752 0.8432810539715688 1.2571305591370288 1.1991879208813043 0.8867467934364835 1.0078217489844148 0.8248101612887797 1.0 18.960590207712364 -6.782361399106949 24.897836645184977 0.930496459530901 1.0768604946064424 0.21238411609958907 0.15011438352415626 458.32522070360756 545415.3851611062 0.06854683274806182 0.046270173190577656 1.6505876864048254e-07 6.782361399106949 0.1463640350755414 ERGT(ph)PPVDPK ddPTM_KYSE-520_SHP099_60min_R1 4 ERGTPPVDPK 10 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 ERGT(1)PPVDPK;ERGT(1)PPVDPK;ERGT(1)PPVDPK;ERGT(1)PPVDPK 80.31 0.033808 6206300000.0 12640300.0 10725300.0 9969300.0 9193900.0 10295900.0 9005500.0 8605400.0 9131300.0 10664600.0 9212400.0 True False 11939117.361186646 10210040.48899649 10611937.029443972 10067685.491753181 11106128.754342439 8949293.334079389 9475317.812610636 9099625.65156145 8728177.472688308 9130785.303138752 1.307567417786345 1.118199601680125 1.162215152052263 1.1026089386082012 1.2163388345715076 0.9801230712327696 1.0377330643568465 0.9965874072664276 0.9559065494276768 1.0 23.122307515428748 -5.804352526162998 0.47515939972979937 0.9620660021253685 1.2567490523473404 0.6812381525564577 0.06159633529978629 0.8315570467284795 0.36135222778334725 0.05322964057765274 0.1164181835794719 1.5690886243112312e-06 5.804352526162998 0.29468305022197183 ERGVGQADWT(ph)PDLGLR ddPTM_KYSE-520_SHP099_60min_R1 1 ERGVGQADWTPDLGLR 16 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 ERGVGQADWT(1)PDLGLR 94.564 0.0044899 250530000.0 105790.0 106860.0 112650.0 75440.0 86035.0 91725.0 74271.0 77948.0 125150.0 87448.0 True False 99921.61781286332 101726.28519986982 119911.59924637286 82609.79491813698 92805.46502781234 91152.5102513389 81779.03749510829 77677.61658119998 102425.91477476349 86673.27875351459 1.15285378896332 1.1736752856571129 1.383489824901893 0.9531172248954198 1.0707505976754006 1.0516794975595944 0.9435322935881454 0.8962118163558012 1.1817473187560719 1.0 16.40329966075055 -5.277647353320121 24.992987407265556 1.0105537634055182 1.2303732095962765 0.5410514258860071 0.09395060082186596 598.1689744600296 922385.9149867743 0.02631969490087813 0.03917163850094071 5.276581453963829e-06 5.277647353320121 0.21981944619075833 ERHAS(ph)EMR ddPTM_KYSE-520_SHP099_60min_R1 3 ERHASEMR 8 1 P49754-2;P49754-3;P49754 P49754-2 VPS41 Vacuolar protein sorting-associated protein 41 homolog 1 ERHAS(1)EMR;ERHAS(1)EMR;ERHAS(1)EMR 65.056 0.018923 2537180000.0 646640.0 637590.0 560670.0 558770.0 608510.0 630070.0 594890.0 626290.0 712990.0 535020.0 True False 610769.590155118 606959.2193578988 596811.685303718 611875.3327996733 656396.2750517124 626137.4994174003 655027.2867669073 624117.5461671853 583528.98901525 530280.1390392621 1.1517866598995827 1.1446010790778633 1.1254649031076192 1.1538718646114896 1.2378292655669547 1.1807673969306267 1.2352476333615974 1.1769581778000089 1.100416451712602 1.0 19.016395189639695 -8.028320871246358 2.82450674864494 1.0005340928477908 1.1765508218471061 0.7145513194216537 0.03473090073070133 0.1587578518148873 3.0746600734392633 0.03728249873939292 0.010025971941967337 9.368695606814395e-09 8.028320871246358 0.1760167289993153 ERHCGELK ddPTM_KYSE-520_SHP099_60min_R1 5 ERHCGELK 8 1 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;A0A087WZ51;A0A087WYR3;O43399-6 O43399 TPD52L2 Tumor protein D54 0 ;;;; 90.906 0.0042255 3334890000.0 4501810.0 4473480.0 2582650.0 2419710.0 4800470.0 4413890.0 3257590.0 3755110.0 4330600.0 3481050.0 False True 4252085.6251642555 4258567.305969625 2749131.751386104 2649678.5108876624 5178239.678061978 4386341.275260637 3586898.9882146423 3742084.399859266 3544272.205542075 3450210.6052159155 1.232413354343092 1.234291987721463 0.7968011422926058 0.7679758756992878 1.5008474179036158 1.2713256601291265 1.039617402715094 1.084595935738562 1.0272625677354188 1.0 21.718252997831513 -7.592046376783012 1.7739441218642105 1.007234734511214 1.1193154520344455 0.042195058392712315 0.20685522140944845 1.6694424486099517 9.501733104168743 0.20453393857896016 0.0642890422003981 2.5583126790891165e-08 7.592046376783012 0.11208071752323145 ERHPGSFDVVHVK ddPTM_KYSE-520_SHP099_60min_R1 2 ERHPGSFDVVHVK 13 1 P62701;C9JEH7;P22090 P62701 RPS4X;RPS4Y1 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1 0 ; 195.1 6.5221e-08 1526870000.0 1340640.0 1935750.0 1702590.0 3768000.0 1472090.0 1454290.0 1465450.0 1287620.0 1366900.0 1008840.0 False True 1266272.026700419 1842753.6643800123 1812341.675640318 4126109.587109493 1587935.1079536474 1445213.236668515 1613591.987413745 1283153.5467527667 1118705.4167448983 999902.4624656442 1.2663955477996705 1.8429334195617382 1.8125184642222927 4.126512076922966 1.5880900063372005 1.4453542129547174 1.6137493885501721 1.2832787145944795 1.1188145431568393 1.0 19.93142784554402 -5.981350691716348 24.992127563034593 1.3507806475403257 2.2821956062905824 0.29021960473065966 0.7145914535248601 338.76604190294677 453981.5469744646 0.2312473764082788 0.2621704168981738 1.0438769507508813e-06 5.981350691716348 0.9314149587502567 ERHPS(ph)WR ddPTM_KYSE-520_SHP099_60min_R1 11 ERHPSWR 7 1 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR;ERHPS(1)WR 96.171 0.0039845 234095456000.0 21460217.0 19908738.0 19820527.0 20325777.0 19730968.0 19756028.0 20456960.0 21477428.0 23305439.0 15701908.0 True False 20269775.983128015 18952292.34285501 21098189.884384505 22257532.734912314 21283682.927748974 19632723.301125515 22524949.157489877 21402927.815137368 19073758.75990768 15562801.311019583 1.3024503479830174 1.217794403725724 1.3556807327126557 1.4301752165371655 1.3675997336468335 1.261516028430186 1.4473582684333697 1.375261907377983 1.2255993235872058 1.0 23.89159843364643 -8.075570914610287 3.4500558401106316 1.0002884876384621 1.3444424914754054 0.7140588261431753 0.06673421765155381 0.18362419640673466 5.292460348227696 0.06873386222602405 0.018193853511299728 8.402897875620479e-09 8.075570914610287 0.3441540038369433 ERHPS(ph)WRSEET(ph)QER ddPTM_KYSE-520_SHP099_60min_R1 2 ERHPSWRSEETQER 14 2 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 ERHPS(0.626)WRS(0.466)EET(0.907)QER;ERHPS(0.999)WRS(0.366)EET(0.635)QER 98.00200000000001 0.0043814 8092500000.0 2871500.0 3023200.0 3351300.0 3048300.0 2889400.0 2690300.0 2474000.0 2705400.0 4100900.0 2601500.0 True False 2712212.170806667 2877960.9340842883 3567330.1602695873 3338009.515495183 3116779.341562859 2673508.839783888 2724096.063913204 2696015.5988451065 3356279.93527629 2578452.7339363704 1.05187585372802 1.1161581114929637 1.3835158245555879 1.294578516628165 1.2087789318537001 1.0368655607281196 1.0564847778902227 1.0455943455396446 1.3016643241516617 1.0 21.29807416881104 -6.192643960765674 7.333272075323023 1.089150487701435 1.2205624816234588 0.22261085022594485 0.1141469640187265 0.4492240742125219 42.20090411054753 0.039744332640589165 0.03971104769974525 6.417354625483347e-07 6.192643960765674 0.13141199392202374 ERIGELGAPEVWGLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 ERIGELGAPEVWGLSPK 17 1 A0A494C050;Q8N5F7 A0A494C050 NKAP NF-kappa-B-activating protein 1 ERIGELGAPEVWGLS(1)PK;ERIGELGAPEVWGLS(1)PK;ERIGELGAPEVWGLS(1)PK;ERIGELGAPEVWGLS(1)PK 158.78 3.3585e-08 1963440000.0 1950360.0 1900170.0 1919980.0 1458310.0 1573330.0 1621210.0 1291800.0 1297860.0 2114200.0 1519560.0 True False 1842169.6428537306 1808882.98098668 2043744.9828766189 1596907.3439431123 1697142.119976843 1611091.4270326842 1422387.7507530637 1293358.0265827999 1730314.5746448662 1506097.8805997926 1.2231407178662916 1.2010394571874077 1.3569801864821112 1.0602945296670596 1.1268471603591717 1.0697122994363943 0.9444191968364022 0.8587476572689481 1.1488725911730124 1.0 20.52238410245963 -5.83566592695258 1.1262946335417858 0.9838929296905009 1.2509767886591079 0.567368769547046 0.09052396599460806 0.34490020750984174 0.9311441643921343 0.03972573188361085 0.054604188517090584 1.4599368580440365e-06 5.83566592695258 0.267083858968607 ERKS(ph)ES(ph)DKDVK ddPTM_KYSE-520_SHP099_60min_R1 5 ERKSESDKDVK 11 3 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 2 ERKS(1)ES(1)DKDVK;ERKS(1)ES(1)DKDVK;ERKS(1)ES(1)DKDVK;ERKS(1)ES(1)DKDVK;ERKS(1)ES(1)DKDVK 114.52 0.00042161 5280580000.0 10911300.0 8125600.0 8429300.0 8743800.0 8918400.0 10131300.0 9705700.0 7275300.0 9860700.0 9917600.0 True False 10306028.437862722 7735233.9792257445 8972666.165356848 9574808.12308067 9620227.34124532 10068066.79868507 10686846.874503793 7250063.682367792 8070245.448018451 9829737.779776044 1.0484540553123005 0.7869217015270147 0.9128082931995849 0.9740654672172566 0.9786860602770323 1.0242457148144246 1.0871955197514207 0.7375643017949329 0.8210031263115057 1.0 23.228721500756507 -7.267958360251508 24.999617866645103 0.834462795331994 0.9659176029332243 0.23034564116737843 0.0984811578187648 753.7528468349124 2890543.26085172 0.053254749383357565 0.026518187116991374 5.395623527686e-08 7.267958360251508 0.1314548076012303 ERKS(ph)ESDKDVK ddPTM_KYSE-520_SHP099_60min_R1 6 ERKSESDKDVK 11 3 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 ERKS(0.997)ES(0.003)DKDVK;ERKS(0.968)ES(0.032)DKDVK;ERKS(0.992)ES(0.008)DKDVK;ERKS(0.976)ES(0.024)DKDVK;ERKS(0.999)ES(0.001)DKDVK;ERKS(0.982)ES(0.018)DKDVK 138.77 0.00013064 19793000000.0 11818010.0 16656800.0 8063800.0 7709420.0 19545700.0 27192000.0 9868370.0 9630260.0 12339310.0 38931900.0 True False 11162441.426681137 15856582.325633481 8583605.450536186 8442120.958878368 21083835.390179668 27022284.64163976 10865961.145610005 9596854.875779584 10098802.352691868 38586993.65455984 0.2892798938059292 0.4109307521489097 0.22244815254017222 0.2187815157214446 0.5463974617698205 0.7002951534278579 0.2815964685635977 0.24870698561522994 0.26171518940031463 1.0 25.20161131087349 -10.778498020193428 2.62573141007766 1.168203466898734 0.357929739162529 0.6257317323702878 0.14999572807387862 64484372.05597328 47289321.90428051 69652318.77567486 0.04302054171359115 1.6653364194920564e-11 10.778498020193428 -0.810273727736205 ERLELCDER ddPTM_KYSE-520_SHP099_60min_R1 1 ERLELCDER 9 1 P07919 P07919 UQCRH Cytochrome b-c1 complex subunit 6, mitochondrial 0 138.25 0.0004892 298070000.0 461040.0 701630.0 325220.0 403890.0 680200.0 714430.0 545080.0 405400.0 554650.0 434340.0 False True 435465.19213954586 667922.6416318986 346184.20157039847 442275.5841660435 733727.8701914093 709970.9773656476 600182.0058681528 403993.76202107174 453939.5415886743 430492.08551140677 1.0115521441520376 1.5515329180522195 0.8041592708008696 1.027372160955383 1.704393402075606 1.6492079674873266 1.3941766319702753 0.938446432856353 1.0544666368242588 1.0 18.71562718871769 -7.263786659214622 24.909244282135514 0.9973423860681335 1.3139942025867888 0.2060651339665468 0.277115088113305 349.8275183884131 3712297.2174674342 0.15469516974208838 0.07994009711778242 5.4477019748135764e-08 7.263786659214622 0.31665181651865526 ERLEQQVPVNQVFGQDEMIDVIGVTK ddPTM_KYSE-520_SHP099_60min_R1 4 ERLEQQVPVNQVFGQDEMIDVIGVTK 26 1 H7C422;P39023;H7C3M2;B5MCW2;G5E9G0 H7C422 RPL3 60S ribosomal protein L3 0 ;;; 224.83 7.940399999999999e-22 1699360000.0 1220540.0 981690.0 604728.0 1160710.0 970940.0 882117.0 827587.0 989010.0 793284.0 654762.0 False True 1152834.2131138328 934528.1388532695 643709.7344790098 1271023.5294198147 1047347.4541070958 876611.3805983133 911247.5704307755 985579.3551466687 649243.622662272 648961.3180771274 1.7764297824863904 1.4400367368925417 0.9919077093628969 1.9585505237598102 1.613882715244703 1.350791420351082 1.4041631527912979 1.5187027757940035 1.0004350098800665 1.0 19.307772962088873 -7.7629817348912304 24.3595879949868 1.000217077388953 1.497424262080682 0.40850223625600446 0.24362596704968012 30.252559400422214 477694.9988350619 0.20024342368808065 0.062364469196230274 1.7259104770241184e-08 7.7629817348912304 0.497207184691729 ERLGS(ph)FGSITR ddPTM_KYSE-520_SHP099_60min_R1 2 ERLGSFGSITR 11 1 Q14315;Q14315-2 Q14315 FLNC Filamin-C 1 ERLGS(0.997)FGS(0.003)ITR;ERLGS(1)FGSITR 160.87 1.3751e-05 2746900000.0 224001.0 251087.0 280980.0 199464.0 216851.0 199648.0 143071.0 141968.0 331140.0 203566.0 True False 211575.21799507717 239024.40363072927 299092.4203838953 218420.9985889614 233915.93998658806 198401.9227763347 157534.01291840206 141475.5461435802 271013.32336008915 201762.56361195128 1.0486346634750265 1.1846816344504993 1.4823979980703355 1.0825645485405766 1.159362449599308 0.9833435857700535 0.7807891122031254 0.701198198570074 1.3432289841505356 1.0 17.622298986335487 -6.180073775538261 2.258577106184654 0.9265554867329464 1.2162030865135325 0.25935426586159704 0.19207308620721372 0.39101753961939123 3.9149219462020537 0.07342200198790848 0.07146368746630634 6.605812226008241e-07 6.180073775538261 0.2896475997805861 ERLGSFGS(ph)ITR ddPTM_KYSE-520_SHP099_60min_R1 1 ERLGSFGSITR 11 1 Q14315;Q14315-2 Q14315 FLNC Filamin-C 1 ERLGS(0.261)FGS(0.679)IT(0.06)R 61.423 0.056736 2091400000.0 910470.0 1050300.0 1178200.0 729550.0 906870.0 881400.0 636100.0 634250.0 1295000.0 782250.0 True False 859964.4141230528 999842.01146756 1254148.657186652 798886.2126527942 978235.5096155285 875898.8556612702 700403.1957377493 632049.9347850634 1059860.644293396 775319.8735812918 1.1091737016243093 1.2895864604233278 1.6175886881289332 1.0303956339499551 1.2617186053763152 1.129725788680474 0.9033732006668503 0.8152118323312828 1.3669979068094535 1.0 19.564432120075274 -6.133814218886242 1.4206727668360613 1.0118337827776993 1.3006641246031967 0.24064662101888934 0.19668126616836998 0.5587395017535354 2.2847101459520434 0.08655634432178545 0.0868220340384854 7.348281433811939e-07 6.133814218886242 0.2888303418254974 ERLNS(ph)SENGEDR ddPTM_KYSE-520_SHP099_60min_R1 1 ERLNSSENGEDR 12 1 Q7L4I2;H0YGP9;E1B6W4;Q7L4I2-2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 ERLNS(0.751)S(0.249)ENGEDR 56.793 0.039251999999999995 769230000.0 608600.0 590540.0 595900.0 598910.0 554550.0 681690.0 630760.0 743470.0 859790.0 673730.0 True False 574839.7447859785 562169.5719813879 634312.6674737114 655830.226331142 598189.9300421138 677435.3198499345 694523.3764243714 740891.076097203 703673.8095420998 667761.2763540088 0.8608461813248831 0.8418720759772805 0.9499093312763993 0.9821327614443135 0.8958140449656558 1.0144872783710164 1.0400773465279152 1.1095148855328725 1.0537804968029507 1.0 19.348972908011756 -5.6710720916823885 0.591484048954634 1.0665211008042677 0.8390010234757322 0.709703914613385 0.044568384702455124 0.5831267161277288 0.4096371554824176 0.03305776666505103 0.07363145111005737 2.1326908629791972e-06 5.6710720916823885 -0.2275200773285354 ERLNSS(ph)ENGEDR ddPTM_KYSE-520_SHP099_60min_R1 1 ERLNSSENGEDR 12 1 Q7L4I2;H0YGP9;E1B6W4;Q7L4I2-2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 ERLNS(0.241)S(0.759)ENGEDR 112.12 0.0025727 249140000.0 452640.0 440100.0 421050.0 435920.0 419920.0 503570.0 507480.0 526290.0 631790.0 515300.0 True False 427531.15688453004 418956.93539643276 448191.55670381937 477349.7057358724 452965.31498202914 500427.03284019354 558781.0309275154 524464.4228270089 517072.86212982674 510734.8428973334 0.8370902491382819 0.8203022394551029 0.8775425505753358 0.9346331317987404 0.8868893933541226 0.9798176877875319 1.0940726654904178 1.0268820115185198 1.012409608078702 1.0 18.962214959100017 -5.984397664521418 0.9731445932175469 1.0379260346887225 0.8391941361116412 0.8146379520838065 0.03675962184586992 0.2310383854666785 0.4738233961810457 0.020225494959897703 0.02463334608877162 1.0365788310979032e-06 5.984397664521418 -0.1987318985770813 ERLPS(ph)VDLK ddPTM_KYSE-520_SHP099_60min_R1 4 ERLPSVDLK 9 1 Q8WUM9;H7BZK4 Q8WUM9 SLC20A1 Sodium-dependent phosphate transporter 1 1 ERLPS(1)VDLK;ERLPS(1)VDLK;ERLPS(1)VDLK;ERLPS(1)VDLK 119.25 0.00051025 1512560000.0 1063190.0 1158660.0 934130.0 1978120.0 1443820.0 1240450.0 1384580.0 1688020.0 1768650.0 1236950.0 True False 1004212.7312832812 1102996.234415882 994345.5144608455 2166119.930056538 1557440.4197879436 1232707.8914284345 1524546.858598605 1682164.6526068305 1447507.7440382363 1225991.5853325387 0.8191024663606463 0.8996768392310822 0.8110541102866857 1.7668309929460064 1.2703516389678176 1.0054782644320304 1.2435214701617108 1.3720849904125232 1.1806832619047818 1.0 20.225517646362103 ERLS(ph)WPK ddPTM_KYSE-520_SHP099_60min_R1 3 ERLSWPK 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 ERLS(1)WPK;ERLS(1)WPK;ERLS(1)WPK 93.111 0.0044428 2920620000.0 1091280.0 965640.0 816600.0 877060.0 935010.0 912750.0 869220.0 965780.0 1114470.0 907450.0 True False 1030744.5229872522 919249.2049448092 869239.3426061963 960415.5187022964 1008589.9675208305 907053.188682579 957089.2403696985 962429.9345947463 912110.3415024419 899410.6989854175 1.1460220832929675 1.0220572270062727 0.9664543056767547 1.0678275450644468 1.1213897818411243 1.0084972190188337 1.0641292586905464 1.0700672514574463 1.0141199593593342 1.0 19.778620520197574 -7.892444800735087 5.0352691790453585 1.0007039894482033 1.0548789106668157 0.14690537835208428 0.049282160638516495 0.41394422806663633 15.26913453823473 0.04808570944325275 0.01256271456212376 1.2810179028517853e-08 7.892444800735087 0.05417492121861245 ERNFEK ddPTM_KYSE-520_SHP099_60min_R1 4 ERNFEK 6 1 O76021-2;O76021;J3QSV6;I3L3U9 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 0 ;;; 80.462 0.026763 7351710000.0 4315000.0 4026100.0 2589910.0 2308030.0 4200180.0 4041170.0 3121230.0 3647610.0 3792390.0 3549570.0 False True 4075638.348260756 3832680.1127006914 2756859.742602516 2527384.4772654744 4530710.27024486 4015947.5590341003 3436754.3886692855 3634957.292268573 3103787.5743720774 3518123.5713236723 1.1584693560741877 1.0894103163234454 0.7836165179284094 0.7183899104244827 1.2878201059152132 1.1415027009762266 0.9768714256322235 1.0332091009813344 0.8822281285601052 1.0 21.74637472655273 -9.196237029062125 0.0033513830080100083 8.850269934566035e-05 1.991202262234276 0.005408447873222477 0.16601026906218389 650041.6320040607 593.3169899243125 178657.8539273314 173842.98632949355 6.364480657383434e-10 9.196237029062125 1.9911137595349304 ERNHKPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 ERNHKPSR 8 2 P84103 P84103 SRSF3 Serine/arginine-rich splicing factor 3 1 ERNHKPS(1)R;ERNHKPS(1)R;ERNHKPS(1)R;ERNHKPS(1)R 88.441 0.0029195000000000002 3328740000.0 1009520.0 964450.0 344931.0 348830.0 943610.0 1813060.0 518500.0 379038.0 612420.0 3332430.0 True False 953519.9131717716 918116.3743310366 367165.80416911305 381982.6983204361 1017866.7385935248 1801744.0200195417 570915.0400723513 377723.20564613416 501219.9658518626 3302907.2627913062 0.28869109463459364 0.2779721927630299 0.11116443029006484 0.11565044608537398 0.3081729693292447 0.5455024548575661 0.1728522766908895 0.11436082686951315 0.15175114708739315 1.0 21.655305032320506 -10.37353664629335 3.527959404349111 1.0046976977041164 0.23247144441514134 0.7670145892884739 0.12701691621607297 214798283.3397266 316177413.2848925 10411985.434610797 0.03650826913759776 4.23119804849636e-11 10.37353664629335 -0.7722262532889751 ERNS(ph)YLGLVSLPAASVAGR ddPTM_KYSE-520_SHP099_60min_R1 1 ERNSYLGLVSLPAASVAGR 19 1 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5;F6R503;F8WA47 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 ERNS(0.951)Y(0.049)LGLVSLPAASVAGR 60.38399999999999 0.014466 79573000.0 81420.0 80548.0 75624.0 74445.0 74111.0 74397.0 75346.0 74643.0 90287.0 67375.0 True False 76903.47029325404 76678.35317498715 80498.84404267816 81520.23041729454 79943.11406609157 73932.66072683402 82962.70898609719 74384.08085480721 73893.15675005238 66778.10991695682 1.151626938661319 1.1482558172182764 1.2054675423246333 1.220762769696096 1.1971455042004984 1.1071391630996201 1.242363838827829 1.1138991646710117 1.1065475923464083 1.0 16.027087639586856 -8.00145220061507 1.2775397709714964 1.0015779901903938 1.1809318275219438 0.6611304141384542 0.03963895729092076 0.2834328638068283 1.0421122921663322 0.03748367331520995 0.011563575860163546 9.966617688366618e-09 8.00145220061507 0.17935383733154997 ERPDLEAPAPGS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 9 ERPDLEAPAPGSPFR 15 1 Q9NQT8;H0YBA8;Q9NQT8-2 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR;ERPDLEAPAPGS(1)PFR 178.56 7.4273e-09 8589060000.0 3388310.0 3545540.0 3403070.0 2941760.0 3368070.0 3106050.0 2720480.0 2896830.0 3749200.0 2963720.0 True False 3200353.6898714695 3375206.936435965 3622437.3373045195 3221343.985927606 3633117.947303115 3086663.9898192557 2995492.667726192 2886781.5728552025 3068439.7896407777 2937463.7465392696 1.089495553312588 1.1490207974183226 1.2331853768654137 1.0966412742022045 1.2368213740793976 1.05079219903761 1.0197547701670493 0.9827462811264386 1.0445881394300833 1.0 21.48613961572155 -6.443039246996634 5.467456734729326 1.013252623832168 1.1604982441685103 0.6937618061882427 0.0475149508551532 0.12510320751976045 6.394971681153908 0.016601664385319004 0.014432555693100738 3.605460591644674e-07 6.443039246996634 0.14724562033634236 ERPEIS(ph)PPSDFEHTIHVGFDAVTGEFTGMPEQWAR ddPTM_KYSE-520_SHP099_60min_R1 2 ERPEISPPSDFEHTIHVGFDAVTGEFTGMPEQWAR 35 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 ERPEIS(0.938)PPS(0.061)DFEHT(0.001)IHVGFDAVTGEFTGMPEQWAR;ERPEIS(0.969)PPS(0.026)DFEHT(0.005)IHVGFDAVTGEFTGMPEQWAR 180.11 4.261699999999999e-11 310318000.0 71624.4 85498.0 91762.1 110615.1 80653.8 74605.9 75867.8 85575.0 103034.0 77037.0 True False 67651.25175229837 81390.54774488565 97677.23179055112 121127.92584635738 87000.79520265188 74140.25690444646 83537.25762237451 85278.16029835513 84325.62287577282 76354.5121138791 0.8860151139647093 1.0659559663415248 1.2792594581034085 1.5863885773469533 1.139432271833449 0.9710003358265169 1.0940710026119045 1.1168712619257763 1.1043960669934632 1.0 16.220425794095785 -5.9984366237309565 24.999033359087292 1.0655772461393145 1.2202433115756675 0.13898478303714912 0.1706614697046347 111.32974251880917 1780151.1533470037 0.05818707852962218 0.06550405549295993 1.0036062939784201e-06 5.9984366237309565 0.15466606543635297 ERPES(ph)PMVPSEQVVEEAVPLPPQALTTSQDGHR ddPTM_KYSE-520_SHP099_60min_R1 2 ERPESPMVPSEQVVEEAVPLPPQALTTSQDGHR 33 1 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 ERPES(0.998)PMVPS(0.002)EQVVEEAVPLPPQALTTSQDGHR;ERPES(0.996)PMVPS(0.004)EQVVEEAVPLPPQALTTSQDGHR 99.929 0.00078147 895960000.0 344780.0 537210.0 674650.0 677160.0 290420.0 468270.0 268440.0 283760.0 374860.0 483940.0 True False 325654.36609811 511401.6252313502 718139.0184781664 741517.082804423 313274.4017362378 465347.35323406284 295576.53492193256 282775.702790082 306794.8734516005 479652.66809962265 0.6789378810053286 1.066191557439921 1.4972063458406757 1.5459459148685726 0.6531276120644273 0.9701756795761457 0.616230357047742 0.5895426453279944 0.6396188197328655 1.0 18.87163055652983 -5.782594375296524 24.996592057497406 0.7291015863960041 1.209160288266037 0.41988082090715073 0.25989802092542164 236.36699161074978 279288.1998474652 0.08595525510778397 0.09755820009325582 1.6497024702222779e-06 5.782594375296524 0.48005870187003297 ERPIS(ph)LGIFPLPAGDGLLT(ph)PDAQK ddPTM_KYSE-520_SHP099_60min_R1 8 ERPISLGIFPLPAGDGLLTPDAQK 24 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 ERPIS(1)LGIFPLPAGDGLLT(1)PDAQK;ERPIS(1)LGIFPLPAGDGLLT(1)PDAQK;ERPIS(1)LGIFPLPAGDGLLT(1)PDAQK;ERPIS(1)LGIFPLPAGDGLLT(1)PDAQK;ERPIS(1)LGIFPLPAGDGLLT(1)PDAQK;ERPIS(1)LGIFPLPAGDGLLT(1)PDAQK;ERPIS(1)LGIFPLPAGDGLLT(1)PDAQK;ERPIS(1)LGIFPLPAGDGLLT(1)PDAQK 227.37 1.2974000000000001e-21 5021866000.0 1528006.0 1603925.0 1777725.0 1929373.0 1896928.0 2116407.0 2013925.0 2297179.0 2581199.0 2369831.0 True False 1443244.461175555 1526870.0354594926 1892319.9979605677 2112740.029832853 2046205.4415560844 2103197.718871684 2217512.193013907 2289210.622214609 2112518.32833164 2348836.141040617 0.6144508916386763 0.6500538751004723 0.8056415536599344 0.8994837881270146 0.8711571683538314 0.8954212182463666 0.9440897788772404 0.974614866578308 0.8993894003162434 1.0 21.16351464122954 -4.616597438517438 0.738528968360845 0.9453004467894639 0.4713324221672747 0.9201187563062267 0.034778186626243206 0.4680096478738388 0.2712966157444903 0.015108069487742596 0.17002790114599906 2.4177008405595893e-05 4.616597438517438 -0.4739680246221892 ERPIS(ph)LGIFPLPAGDGLLTPDAQK ddPTM_KYSE-520_SHP099_60min_R1 5 ERPISLGIFPLPAGDGLLTPDAQK 24 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 ERPIS(1)LGIFPLPAGDGLLTPDAQK;ERPIS(1)LGIFPLPAGDGLLTPDAQK;ERPIS(1)LGIFPLPAGDGLLTPDAQK;ERPIS(1)LGIFPLPAGDGLLTPDAQK;ERPIS(1)LGIFPLPAGDGLLTPDAQK 234.34 1.7304e-28 2662545000.0 1674630.0 2322610.0 1873433.0 1792196.0 1781798.0 2351031.0 1599536.0 2087759.0 2449303.0 2311369.0 True False 1581734.935607859 2211028.3292913134 1994197.4887787823 1962525.7689966254 1922015.3655561765 2336357.3434583335 1761232.7088469965 2080517.051315614 2004571.3171040544 2290892.0688778698 0.6904449830247255 0.9651385848021747 0.8704894987722337 0.8566644390007926 0.838981194996944 1.0198461006514086 0.7687977678100251 0.9081689528632826 0.8750177908145356 1.0 21.127478059672292 -13.999999999999998 0.1253178815096602 1.3979416307355061 0.8163237496345354 0.2058831878407389 0.08576853135513963 265.47515137768266 2.1231524857028434 27.044745832660382 0.7014856831228816 1.0000000000000041e-14 13.999999999999998 -0.5816178811009708 ERPISLGIFPLPAGDGLLT(ph)PDAQK ddPTM_KYSE-520_SHP099_60min_R1 9 ERPISLGIFPLPAGDGLLTPDAQK 24 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 ERPISLGIFPLPAGDGLLT(1)PDAQK;ERPISLGIFPLPAGDGLLT(1)PDAQK;ERPISLGIFPLPAGDGLLT(1)PDAQK;ERPISLGIFPLPAGDGLLT(1)PDAQK;ERPISLGIFPLPAGDGLLT(1)PDAQK;ERPISLGIFPLPAGDGLLT(1)PDAQK;ERPISLGIFPLPAGDGLLT(1)PDAQK;ERPISLGIFPLPAGDGLLT(1)PDAQK;ERPISLGIFPLPAGDGLLT(1)PDAQK 221.89 4.6950999999999996e-26 16145142000.0 2153696.0 2532250.0 1755189.0 1810281.0 1815891.0 2953375.0 1992914.0 2664922.0 3051834.0 2569036.0 True False 2034226.1895934625 2410596.909015262 1868331.2913416924 1982329.5619591724 1958791.2906935413 2934941.891126168 2194377.1960863057 2655678.007579473 2497697.876074511 2546276.3397197635 0.7989023649402265 0.9467145695901042 0.7337504033624709 0.7785209841667626 0.7692767906366049 1.152640758327582 0.8617985258928389 1.0429653553909823 0.9809217629337911 1.0 21.279957568417757 -6.238231782701721 24.995654840021384 1.0012339566604003 0.8078045029844009 0.5871645648531152 0.08468947450188569 586.7779190144513 631987.3942142156 0.027289768151172195 0.02727421782704178 5.777876002120228e-07 6.238231782701721 -0.1934294536759994 ERPISMINEASNYNVTSDYAVHPMS(ph)PVGR ddPTM_KYSE-520_SHP099_60min_R1 2 ERPISMINEASNYNVTSDYAVHPMSPVGR 29 1 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;Q9HAU0-5;Q9HAU0-3;F5H1X3 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 ERPISMINEASNYNVT(0.008)S(0.177)DYAVHPMS(0.815)PVGR;ERPISMINEASNYNVTSDYAVHPMS(1)PVGR 210.18 2.21e-22 2555700000.0 665990.0 704220.0 583280.0 736640.0 527390.0 512750.0 601100.0 547440.0 661590.0 641250.0 True False 629046.2070818492 670388.2141442292 620879.1620809967 806650.0441211086 568892.5925613743 509549.7370550449 661865.0541706661 545541.0584134565 541461.9333266938 635569.0238849502 0.9897370441950901 1.0547842782620915 0.9768870708736543 1.2691777191884155 0.8950917542897031 0.8017221071291273 1.0413739960531432 0.8583506085284132 0.8519325407285874 1.0 19.277689287328766 ERPLQQVS(ph)PVASVPWR ddPTM_KYSE-520_SHP099_60min_R1 4 ERPLQQVSPVASVPWR 16 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 ERPLQQVS(1)PVASVPWR;ERPLQQVS(1)PVASVPWR;ERPLQQVS(1)PVASVPWR;ERPLQQVS(1)PVASVPWR 221.99 2.8459e-18 6431570000.0 2809660.0 2814520.0 2246190.0 2060040.0 2474480.0 2709910.0 2455290.0 2489590.0 3033230.0 2731080.0 True False 2653802.5588816484 2679306.2345193536 2390983.0014310684 2255825.5822263896 2669207.49813472 2692996.4464999232 2703494.6745212055 2480954.193364674 2482471.8935058387 2706884.7559480867 0.9803899309160481 0.9898117120176128 0.8832969324523852 0.8333659485389825 0.9860809523824112 0.9948692645973769 0.9987476077733151 0.9165348424653268 0.9170955239416362 1.0 21.36820203627809 ERPLQQVSPVAS(ph)VPWR ddPTM_KYSE-520_SHP099_60min_R1 1 ERPLQQVSPVASVPWR 16 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 ERPLQQVS(0.066)PVAS(0.934)VPWR 187.51 6.7277e-12 1005600000.0 373380.0 298340.0 317400.0 282060.0 287610.0 330090.0 237630.0 247170.0 363470.0 323400.0 True False 352667.86708542367 284007.2985825301 337860.11185795564 308866.8975955689 310243.2707229511 328029.7858693313 261651.9594453091 246312.6249599119 297473.0103330665 320534.9276013925 1.100247856682847 0.886041657637114 1.0540508467710832 0.9635982571598762 0.9678922451432819 1.0233823450193833 0.8162978100492422 0.7684423872403034 0.9280517806876726 1.0 18.29012204542065 -6.758142951386745 24.996323687062944 0.8589015195222692 0.9935101282796426 0.34422051834610035 0.07983697773807824 84.02043596820569 637120.7309171914 0.02968514647413607 0.022029102977337033 1.7452475966249375e-07 6.758142951386745 0.13460860875737335 ERPQDRPEDLDVPPALADFIHQQR ddPTM_KYSE-520_SHP099_60min_R1 1 ERPQDRPEDLDVPPALADFIHQQR 24 2 Q01780-2;Q01780 Q01780-2 EXOSC10 Exosome component 10 0 93.006 0.0049945 215550000.0 34669.0 26180.0 20336.0 26115.0 37770.0 28959.0 25778.0 30745.0 30873.0 25569.0 False True 32745.841459061936 24922.273503018845 21646.89109875044 28596.96174823896 40742.2841180969 28778.25613920438 28383.89180903581 30638.35277093696 25267.241444996176 25342.478552380977 1.2921325509412496 0.9834189442641295 0.8541741903424308 1.1284200828711846 1.607667696507494 1.1355738579287702 1.1200124624893522 1.2089722284901934 0.997031185910672 1.0 14.629270009804117 -3.74252458587307 6.896412474638048 1.1303188479803659 10.94781820272272 0.06646319754041252 0.1915154744656997 21248.346055533282 8942.787118504033 0.0507849348510053 3206770.887042893 0.00018091534892493013 3.74252458587307 9.817499354742354 ERPS(ph)KDKEK ddPTM_KYSE-520_SHP099_60min_R1 2 ERPSKDKEK 9 3 A0A0C4DGG8;Q8IX12-2;Q8IX12;H0YFJ7 A0A0C4DGG8 CCAR1 Cell division cycle and apoptosis regulator protein 1 1 ERPS(1)KDKEK;ERPS(1)KDKEK 70.41199999999999 0.029575 1890510000.0 2006860.0 2156700.0 1054940.0 804040.0 1768300.0 2248900.0 2341600.0 700940.0 1197730.0 7561900.0 True False 1895535.4752237755 2053088.8947273039 1122943.1203636786 880455.71985656 1907455.1497492937 2234863.780912901 2578311.77981373 698508.6027406267 980252.4243162387 7494907.449069185 0.25290979082859627 0.2739311870998865 0.1498274832604024 0.11747386153059254 0.2545001606372319 0.29818430662415385 0.34400848807465106 0.09319776227888932 0.13078912994956052 1.0 22.837479232474852 -10.505818388276358 3.089943178211761 1.0233425647433907 0.21398793321421358 0.8946384227397735 0.0810478609495594 51101732.233547986 60734020.12417156 10106412.148428706 0.022570125873448667 3.1201941030011084e-11 10.505818388276358 -0.8093546315291771 ERPS(ph)SREDTPSR ddPTM_KYSE-520_SHP099_60min_R1 3 ERPSSREDTPSR 12 2 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;A0A3B3IT83;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 ERPS(0.5)S(0.5)REDTPSR;ERPS(0.482)S(0.482)REDT(0.015)PS(0.022)R;ERPS(0.557)S(0.413)REDT(0.015)PS(0.015)R 78.932 0.008884399999999999 701174000.0 307877.0 337287.0 322756.0 345251.0 282781.0 309225.0 275305.0 307986.0 396533.0 325728.0 True False 290798.4490724168 321083.2262418918 343561.3681878589 378063.55123650143 305034.2558962026 307295.0120738102 303135.51611787616 306917.66845047305 324532.6029834702 322842.3033325495 0.9007445618825072 0.9945512806949411 1.0641770444623775 1.1710471252804509 0.9448397956137631 0.9518424596211466 0.9389584728790203 0.9506736424635374 1.0052356820449877 1.0 18.300470107604397 ERPS(ph)SWSSLDQK ddPTM_KYSE-520_SHP099_60min_R1 3 ERPSSWSSLDQK 12 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 ERPS(0.498)S(0.498)WS(0.004)SLDQK;ERPS(0.733)S(0.267)WSSLDQK;ERPS(0.801)S(0.198)WS(0.001)SLDQK 124.42 9.3566e-05 592280000.0 934600.0 981310.0 935700.0 1128750.0 1122230.0 1213320.0 1326510.0 1651500.0 1637200.0 1486900.0 True False 882755.8749210889 934166.3946236613 996016.719172933 1236026.0606289369 1210543.1163847486 1205747.2198217975 1460606.5762900189 1645771.331962996 1339925.7504533988 1473727.2227906939 0.598995432309024 0.6338801239314125 0.6758487620842384 0.8387074904461364 0.8214159972511249 0.8181617338509622 0.9910969640122211 1.1167408096367482 0.9092087936844074 1.0 20.491038085110485 -5.6402748694320115 0.552058943730493 1.0299692211917215 0.5464880961208908 0.8373486662869816 0.06479750494494499 0.4645152765046912 0.2738160316803523 0.0503625631442468 0.12111658219090729 2.2894181978694847e-06 5.6402748694320115 -0.48348112507083074 ERPSGPES(ph)PVQGPR ddPTM_KYSE-520_SHP099_60min_R1 2 ERPSGPESPVQGPR 14 1 A0A669KBI7;Q9UMN6 A0A669KBI7 KMT2B Histone-lysine N-methyltransferase 2B 1 ERPSGPES(1)PVQGPR;ERPSGPES(1)PVQGPR 133.94 5.7258e-06 703530000.0 614960.0 608410.0 577090.0 458170.0 532350.0 496460.0 442120.0 515220.0 651740.0 575370.0 True False 580846.9429076333 579181.0703579715 614290.144776647 501714.3390461671 574242.9163428358 493361.40898751316 486813.8042753871 513432.8220732518 533400.445028401 570272.6694310859 1.0185424868547468 1.015621300834516 1.0771867173460612 0.8797797368523484 1.0069620150580083 0.8651324803618928 0.8536509469426987 0.9003286490749443 0.9353428169028873 1.0 19.121292367005797 -5.263586187522172 24.99952152329163 0.9145693330892943 1.0349672835528092 0.5203274156183968 0.05124552310734776 145.9388936470057 1699459.8711110738 0.01430307447763151 0.02247699088399897 5.450217231580277e-06 5.263586187522172 0.12039795046351487 ERPSQPEGLR ddPTM_KYSE-520_SHP099_60min_R1 2 ERPSQPEGLR 10 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ; 115.29 0.00065715 325740000.0 569200.0 543700.0 427070.0 426090.0 526490.0 540900.0 471210.0 517270.0 579680.0 497480.0 False True 537625.3413279313 517579.83588966215 454599.61553615966 466585.46549136995 567921.7676816746 537524.0424633329 518844.50536642707 515475.71110172494 474424.7245436266 493072.714233583 1.0903571132781085 1.0497028550731553 0.9219727687482672 0.9462812522826699 1.151801248147415 1.0901516692093653 1.0522677292595737 1.0454354828840295 0.9621800412968657 1.0 18.911440893308956 -4.51879539586234 24.98726928661986 1.025596124646113 1.0801935791286392 0.09239195711286774 0.06558112051194953 425.1471095709798 2601560.166634068 0.018258196799511746 0.05097604459467093 3.0283397987939013e-05 4.51879539586234 0.054597454482526286 ERPSS(ph)AIYPSDSFR ddPTM_KYSE-520_SHP099_60min_R1 2 ERPSSAIYPSDSFR 14 1 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ERPS(0.041)S(0.959)AIYPSDSFR;ERPS(0.237)S(0.763)AIYPSDSFR 159.4 2.907e-08 1062420000.0 305860.0 392730.0 386900.0 430500.0 407300.0 312370.0 350760.0 426960.0 543930.0 526770.0 True False 288893.3360832064 373862.6613002521 411840.1930618872 471414.5905654552 439352.19278000743 310420.382962232 386218.243887711 425478.9754132129 445166.02335946524 522103.227620859 0.5533260872560531 0.7160703889992875 0.7888098967297659 0.9029145303575621 0.8415044564693944 0.5945574869873302 0.7397354075891196 0.8149326663848692 0.8526398608719883 1.0 18.993975551832122 -13.999999999999469 0.10497041237177425 1.7662902497767226 0.6092642537879697 0.4264665937742518 0.09738009994459293 206.9923025229359 1.4593458446660013 34.41790825290858 1.5763078445603584 1.000000000001223e-14 13.999999999999469 -1.1570259959887528 ERPSS(ph)REDT(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 ERPSSREDTPSR 12 2 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;A0A3B3IT83;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 2 ERPS(0.397)S(0.604)REDT(0.852)PS(0.148)R 65.71600000000001 0.042887 0.0 178120.0 162340.0 170280.0 142340.0 162560.0 145740.0 141950.0 143120.0 182810.0 137830.0 True False 168239.3285265831 154540.94272269215 181256.52125763305 155867.95080391856 175352.5471601228 144830.38260049195 156299.69129849618 142623.55012445923 149616.3122650778 136608.93343011755 1.2315397265922299 1.131265275574 1.3268277315872246 1.1409791943339707 1.2836096641499992 1.0601823684874905 1.1441396062026314 1.0440279895561768 1.0952161656515251 1.0 17.059692305018785 -6.273803086423574 24.916895081215543 1.076179115534953 1.218985387891952 0.5853710957373651 0.06466649486819583 546.1874746922533 1100742.1591356338 0.021270987503767914 0.018884325074081627 5.32349577317909e-07 6.273803086423574 0.14280627235699916 ERPSS(ph)REDTPSR ddPTM_KYSE-520_SHP099_60min_R1 2 ERPSSREDTPSR 12 2 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;A0A3B3IT83;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 ERPS(0.414)S(0.581)REDTPS(0.005)R;ERPS(0.397)S(0.578)REDT(0.012)PS(0.012)R 84.84200000000001 0.0027275 3650770000.0 344690.0 364980.0 352490.0 259265.0 325110.0 291580.0 301450.0 328300.0 434370.0 270372.0 True False 325569.35857752 347445.81295385084 375212.06940394116 283905.4676491353 350694.3073771376 289760.1410638909 331923.5078684862 327161.2039257959 355499.35757662 267976.7144262331 1.214916599282139 1.2965522534216065 1.4001666906294843 1.0594408109563078 1.3086745545336347 1.0812885055490677 1.2386281717766787 1.2208568368571993 1.326605404270973 1.0 18.031748118995555 -10.841824595423962 2.639162038910046 0.9094922754713051 1.2366763917238317 0.33887858059906806 0.09993526096175724 44829823.004570864 30826601.993151773 25672642.762237392 0.024631379011584187 1.4393798032920273e-11 10.841824595423962 0.32718411625252664 ERPSS(ph)WSSLDQK ddPTM_KYSE-520_SHP099_60min_R1 1 ERPSSWSSLDQK 12 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 ERPS(0.345)S(0.655)WSSLDQK 122.33 0.00019507 0.0 227380.0 219230.0 243400.0 249680.0 242090.0 295050.0 290250.0 366470.0 424320.0 378410.0 True False 214766.77812920744 208697.86172906117 259089.95345376947 273409.5121309708 261141.1056963219 293208.4835067597 319591.3025670205 365198.8011047408 347274.1842367368 375057.5817985252 0.5726234811714236 0.5564421887654847 0.6908004691208945 0.7289800963891511 0.6962693686768413 0.7817692475398791 0.8521126303712473 0.9737139544106581 0.9259223145721843 1.0 18.51675258097291 -6.232315233858158 0.4319954676998923 1.0202214798253113 0.5251112116731053 0.9370507426779653 0.03746098737484107 0.3163773012884706 0.12253527159253885 0.040049462284273175 0.063395157233834 5.85712868866014e-07 6.232315233858158 -0.49511026815220605 ERPSSREDTPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 ERPSSREDTPSR 12 2 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;A0A3B3IT83;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 ERPS(0.159)S(0.224)REDT(0.08)PS(0.538)R 71.98 0.016125 875290000.0 205940.0 182880.0 203950.0 186990.0 160710.0 149940.0 164290.0 167110.0 206850.0 139560.0 True False 194516.097668788 174094.17029152365 217096.94333153797 204761.4733794067 173356.9626851828 149004.16884258122 180898.03651588564 166530.3344137673 169291.2542641615 138323.6069760369 1.4062393391930983 1.2586005678819785 1.5694858461083052 1.4803075039452913 1.2532709815412422 1.0772143099796017 1.3077886014584936 1.203918391476134 1.2238782516240296 1.0 17.077687869254 -5.901529550299941 4.906305962434087 1.18249510601244 1.425236395160415 0.5752953957299783 0.10712958828434817 0.168347651436801 6.739140433087727 0.034020759784656796 0.0388305885839257 1.2544993762068502e-06 5.901529550299941 0.242741289147975 ERPT(ph)SPAPHRPPK ddPTM_KYSE-520_SHP099_60min_R1 7 ERPTSPAPHRPPK 13 2 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 ERPT(0.907)S(0.093)PAPHRPPK;ERPT(0.608)S(0.392)PAPHRPPK;ERPT(0.926)S(0.074)PAPHRPPK;ERPT(0.938)S(0.062)PAPHRPPK;ERPT(0.727)S(0.273)PAPHRPPK;ERPT(0.886)S(0.114)PAPHRPPK;ERPT(0.979)S(0.021)PAPHRPPK 109.35 0.00014764 59917600000.0 8953970.0 7541220.0 7463190.0 8324410.0 8307850.0 8225870.0 7596300.0 8448600.0 9643040.0 7068250.0 True False 8457275.434803337 7178928.4715980105 7944279.168926215 9115559.423574863 8961630.529799605 8174529.294098444 8364208.136743688 8419293.77851807 7892107.017256375 7005630.804015283 1.2072111236515695 1.0247369112690612 1.1339848460716693 1.301176107988773 1.2792039404450546 1.1668512833153022 1.1939264815310757 1.2017895338835933 1.1265376720584546 1.0 22.74008352959504 -9.99075979477539 4.751941558453281 0.9999970784258855 1.182585964861319 0.3500306419933601 0.07427639050857807 2.4950227277353133e-06 5.298791994508239e-07 0.07804821927531928 0.018929170720584285 1.021504314345879e-10 9.99075979477539 0.18258888643543358 ERPT(ph)SPAPHRPPKR ddPTM_KYSE-520_SHP099_60min_R1 2 ERPTSPAPHRPPKR 14 3 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 ERPT(0.894)S(0.106)PAPHRPPKR;ERPT(0.883)S(0.117)PAPHRPPKR 118.31 8.0105e-05 6296700000.0 312610.0 235680.0 83166.0 501520.0 76792.0 195593.0 157605.0 410710.0 86413.0 40932.0 True False 295268.90012741473 224357.57903710761 88527.01343030475 549184.3100125141 82835.0935132883 194372.2315354605 173537.25147657265 409285.34287043434 70722.57749445977 40569.37432461413 7.278123092676587 5.530220339163231 2.182114338810345 13.536918405944323 2.0418134342049945 4.7911074491856676 4.277543205079321 10.088529825369132 1.7432503870672507 1.0 15.308103432506824 ERPTS(ph)PAPHRPPKR ddPTM_KYSE-520_SHP099_60min_R1 2 ERPTSPAPHRPPKR 14 3 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 ERPT(0.03)S(0.97)PAPHRPPKR;ERPT(0.097)S(0.903)PAPHRPPKR 175.26 9.2846e-09 5925900000.0 2638200.0 1606910.0 436760.0 3901300.0 536450.0 1468820.0 1247560.0 3042700.0 552100.0 250410.0 True False 2491853.786878686 1529711.6315789176 464914.2484407082 4272078.379031388 578665.5630170266 1459652.5495488867 1373675.5398122722 3032145.58387152 451852.5573084056 248191.5622160317 10.0400423150152 6.163431254151263 1.8732073092639467 17.212826821698602 2.331527944988487 5.881152995355946 5.534739084387539 12.216956760328017 1.8205798507972748 1.0 17.921094543345813 -7.904467779543842 8.918039867192627 1.0132242332890486 7.420465079776649 0.2469516282428209 4.3584236811317245 0.3550154577992222 28.020747184781218 4.036193449415545 1.0432416871683527 1.2460406780256955e-08 7.904467779543842 6.407240846487601 ERPVS(ph)EMFSLEDSIIER ddPTM_KYSE-520_SHP099_60min_R1 1 ERPVSEMFSLEDSIIER 17 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ERPVS(1)EMFSLEDSIIER 228.48 7.4667e-19 142540000.0 43178.0 52646.0 72885.0 45559.0 51620.0 38993.0 51734.0 65771.0 71619.0 68183.0 True False 40782.83026679096 50116.80713674295 77583.2837201232 49888.91366218718 55682.20032237659 38749.63022328104 56963.77759518423 65542.85575206683 58614.79496806864 67578.95166557131 0.6034842101223084 0.7416037967673209 1.1480391720792065 0.7382315415171427 0.8239577405392688 0.5733979185566795 0.8429218890088958 0.9698708567782979 0.8673528298890506 1.0 16.044286350077616 -7.006631842803652 24.593703880767652 0.9324464165433877 0.7814289799785066 0.21007790514314728 0.14993542155203046 460.9804095665027 1709510.3706415975 0.06785835411678755 0.04384263413195506 9.848456186993408e-08 7.006631842803652 -0.1510174365648811 ERQAQAQES(ph)EEEEESR ddPTM_KYSE-520_SHP099_60min_R1 1 ERQAQAQESEEEEESR 16 1 H0YLQ7;Q9NVM6 H0YLQ7 DNAJC17 DnaJ homolog subfamily C member 17 1 ERQAQAQES(1)EEEEESR 204.31 4.7643e-13 29060000.0 14319.0 14950.0 12819.0 7612.4 12069.0 10128.0 7796.8 8710.3 14232.0 11768.0 True False 13524.696525781168 14231.77955959251 13645.333251125197 8335.880207248487 13018.76163678347 10064.787395209158 8584.976633435115 8680.086002299298 11647.827559524037 11663.744675365453 1.159550118955035 1.2201724193818222 1.1698930001395675 0.7146830146971906 1.1161734073517484 0.8629121843233253 0.7360394858065707 0.7441937597135656 0.9986353339956906 1.0 13.509743423427093 -5.192588539039304 8.480817222689913 0.8742135702188438 1.188474134889435 0.5534821249779049 0.12391658391748721 0.2708465455793746 31.152752744750458 0.03387481408700882 0.058827423490854756 6.4181736171615225e-06 5.192588539039304 0.31426056467059116 ERQELGS(ph)PEER ddPTM_KYSE-520_SHP099_60min_R1 2 ERQELGSPEER 11 1 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYF0 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ERQELGS(1)PEER;ERQELGS(1)PEER 64.39399999999999 0.026337 1090100000.0 1570090.0 1445140.0 1235870.0 1379450.0 1415690.0 1392850.0 1454180.0 1454240.0 1648030.0 1445350.0 True False 1482993.9778031812 1375713.3052006362 1315536.1576619141 1510552.5132532332 1527096.7488257522 1384156.7064985272 1601182.7058291468 1449195.5808621661 1348789.295455482 1432545.323465286 1.0352160964903094 0.9603279440212231 0.9183207931457763 1.0544535579504388 1.0660023971400423 0.9662219294746583 1.1177187064182597 1.0116228485927437 0.9415334184281161 1.0 20.4501493536147 -5.277294109701994 24.793776383477972 1.0264260183677425 0.9701922377746802 0.1548988201850795 0.05426877403879579 1226.6410174387815 1918230.1007806584 0.015401958163723962 0.02293291052641258 5.2808750313368805e-06 5.277294109701994 -0.05623378059306228 ERQPS(ph)IDLTCVSYPFDEFSNPYR ddPTM_KYSE-520_SHP099_60min_R1 4 ERQPSIDLTCVSYPFDEFSNPYR 23 1 C9JKF1;Q5K651 C9JKF1 SAMD9 Sterile alpha motif domain-containing protein 9 1 ERQPS(1)IDLTCVSYPFDEFSNPYR;ERQPS(0.999)IDLT(0.001)CVSYPFDEFSNPYR;ERQPS(1)IDLTCVSYPFDEFSNPYR;ERQPS(1)IDLTCVSYPFDEFSNPYR 271.44 7.737200000000001e-38 949980000.0 251685.0 304920.0 246796.0 230252.0 238809.0 278457.0 212362.0 229988.0 302287.0 241003.0 True False 237723.5313283911 290271.1855057488 262704.8650475616 252135.08085221192 257601.90966265823 276719.0465746207 233829.62341339383 229190.22530760273 247399.30083514925 238867.90091749685 0.995209194769535 1.2151954464823895 1.0997914078807007 1.0555419120097573 1.0784283224041558 1.158460578050616 0.9789076829295569 0.9594852402825078 1.0357159747495712 1.0 17.865853471811967 -6.776078841493852 24.923079486765126 0.9901509554256303 1.1025835310098198 0.4504520718268933 0.05777292156261138 205.66729360704096 350136.8342542298 0.023540997027874485 0.015949967925429083 1.6746388357539766e-07 6.776078841493852 0.11243257558418951 ERRPDS(ph)PTRPTLR ddPTM_KYSE-520_SHP099_60min_R1 4 ERRPDSPTRPTLR 13 3 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 ERRPDS(0.943)PT(0.056)RPTLR;ERRPDS(0.989)PT(0.011)RPTLR;ERRPDS(0.998)PT(0.002)RPTLR;ERRPDS(0.985)PT(0.015)RPTLR 156.73 2.9976e-06 10202200000.0 585054.0 473236.0 486032.0 406387.0 501872.0 444066.0 302107.0 446824.0 579980.0 423757.0 True False 552599.888343766 450501.0322182826 517362.4003986956 445009.8982952929 541366.4711389336 441294.4193760814 332646.92384018854 445274.07183350547 474670.252106011 420002.8426579573 1.315705114867028 1.0726142455782435 1.231806901888105 1.0595402056783243 1.288959064450458 1.0506938871731961 0.7920111248177675 1.0601691860360303 1.130159617735192 1.0 18.680039566791685 -6.509634947935798 24.533986904506406 0.9892781550938021 1.1804745652604787 0.41990035086339184 0.11083885995500764 500.5784849465116 927319.7859831718 0.03956774795772621 0.03333037011529436 3.092894113901938e-07 6.509634947935798 0.19119641016667654 ERRPTWAEER ddPTM_KYSE-520_SHP099_60min_R1 1 ERRPTWAEER 10 2 Q8ND56-2;Q8ND56;Q8ND56-3;A0A140TA76;A0A0G2JQ95;A0A096LP11 Q8ND56-2 LSM14A Protein LSM14 homolog A 0 79.697 0.0074754999999999995 405800000.0 89218.0 197550.0 156660.0 137710.0 138380.0 101310.0 189840.0 104540.0 306850.0 61275.0 False True 84268.89968832635 188059.40147140448 166758.55426486232 150797.9169959786 149269.71872550322 100677.68671096358 209030.87985985557 104177.37513981944 251133.77505901872 60732.15117122864 1.387550054842254 3.0965377949677517 2.745803516735347 2.482999763515999 2.457836843365735 1.6577329267839078 3.4418487708514145 1.7153578974355947 4.13510422759389 1.0 15.890172850813828 -4.242395439160142 23.038994202245927 2.55316386697187 1.3875469656461334 0.1330686086740649 0.8691780894691714 2691.3177451272522 3255753.381014126 0.196216890180354 5.994412045821814 5.72274719061218e-05 4.242395439160142 -1.1656169013257365 ERRT(ph)PPGR ddPTM_KYSE-520_SHP099_60min_R1 4 ERRTPPGR 8 2 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 ERRT(1)PPGR;ERRT(1)PPGR;ERRT(1)PPGR;ERRT(1)PPGR 99.439 0.0064834 9031360000.0 1164936.0 1334175.0 1392024.0 762149.0 986595.0 958838.0 687375.0 691093.0 1629429.0 838477.0 True False 1100314.677837657 1270079.2303624968 1481756.0943571504 834583.4118115472 1064234.4135423312 952853.5363791033 756861.5731335239 688695.7596853193 1333565.7681624289 831048.7461052346 1.3240073858415107 1.5282848765668775 1.7829954034603857 1.0042532591774889 1.2805920453281914 1.1465675639903374 0.9107306601214504 0.8287068152294771 1.6046781544551674 1.0 19.664573576825603 -5.272904901393362 24.99012205675856 1.103882597438528 1.543414793823063 0.4305883071415225 0.22877038301372057 659.2481415877512 1436888.2190547923 0.06412598660021969 0.09606267697951282 5.3345169402186924e-06 5.272904901393362 0.4395321963845349 ERRT(ph)PS(ph)DDEEDNLFAPPK ddPTM_KYSE-520_SHP099_60min_R1 4 ERRTPSDDEEDNLFAPPK 18 2 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 2 ERRT(1)PS(1)DDEEDNLFAPPK;ERRT(1)PS(1)DDEEDNLFAPPK;ERRT(1)PS(1)DDEEDNLFAPPK;ERRT(1)PS(1)DDEEDNLFAPPK 201.15 1.7888e-12 2343800000.0 2082230.0 1964320.0 1841270.0 1731570.0 1915850.0 1867860.0 1692120.0 1795420.0 2387350.0 1941700.0 True False 1966724.5510774055 1869951.1186955688 1959961.2103361622 1896137.892184494 2066616.4953046315 1856201.992892511 1863176.0030997652 1789192.1070741762 1953867.4201960166 1924498.0486197409 1.0219415667830631 0.9716565418378609 1.0184272266432568 0.9852636086300078 1.0738470204149173 0.964512275927631 0.9681360832950929 0.9296928663333243 1.0152607957162334 1.0 20.876050777626446 ERS(ph)HERPDR ddPTM_KYSE-520_SHP099_60min_R1 1 ERSHERPDR 9 2 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 ERS(1)HERPDR 71.176 0.013687000000000001 283100000.0 19730.0 17695.0 20852.0 19541.0 23178.0 15702.0 21907.0 20666.0 20055.0 14601.0 True False 18635.53756922009 16844.905639263507 22196.15328437963 21398.17076478413 25001.976735219756 15603.997993638843 24121.573351716477 20594.314469480654 16413.517545408555 14471.646499406113 1.287727527754693 1.1639937197163286 1.5337683438640182 1.4786272429790395 1.7276525332653603 1.0782462102207373 1.6668160981341258 1.423080260447614 1.1341845273847817 1.0 13.820941452171922 -7.873162759252293 3.543060580977081 1.0073433518548531 1.4249174048196038 0.35707625137051824 0.19311333841445505 0.2384391793304639 5.4003635123036835 0.18353829397669932 0.049111218765340005 1.3391747148424672e-08 7.873162759252293 0.4175740529647507 ERS(ph)HERPDRK ddPTM_KYSE-520_SHP099_60min_R1 5 ERSHERPDRK 10 3 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 ERS(1)HERPDRK;ERS(1)HERPDRK;ERS(1)HERPDRK;ERS(1)HERPDRK;ERS(1)HERPDRK 77.77600000000001 0.0086136 10927700000.0 3071830.0 2924150.0 2092965.0 2370623.0 3170310.0 3031220.0 2590246.0 2408554.0 3037540.0 1737339.0 True False 2901429.4663587147 2783669.4447613666 2227880.8727624 2595926.297166205 3419795.360403598 3012301.0316060334 2852093.3440448344 2400199.2883347305 2485999.3061520965 1721947.528089288 1.6849697328339655 1.616582038275109 1.293814611897325 1.5075524978665893 1.9860043959633777 1.7493570404834293 1.6563183822503476 1.3938864275371075 1.4437137401687365 1.0 20.715609750317494 -8.098615533538002 1.1461793340028756 1.0080205500921031 1.634814981477873 0.5474097313547501 0.1736918188342314 0.5176167845883737 1.4755152207436228 0.18344384790451496 0.05797633103672058 7.968644758793003e-09 8.098615533538002 0.6267944313857698 ERS(ph)KDAS(ph)PINR ddPTM_KYSE-520_SHP099_60min_R1 4 ERSKDASPINR 11 2 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 ERS(1)KDAS(1)PINR;ERS(1)KDAS(1)PINR;ERS(1)KDAS(1)PINR;ERS(1)KDAS(1)PINR 148.82 0.00031671 5698570000.0 10293870.0 8881160.0 8290510.0 8994740.0 9166110.0 9145030.0 9762730.0 9762710.0 10103100.0 9181830.0 True False 9722848.510778913 8454495.742707055 8824929.539885014 9849597.385232802 9887430.708968218 9087952.475593356 10749642.023462953 9728845.437643632 8268631.718425189 9100486.129555646 1.0683878171301224 0.9290158374341555 0.9697206736269058 1.0823155208428117 1.0864728068599339 0.9986227489626532 1.1812162416853034 1.069046784879685 0.9085923104229736 1.0 23.11751218254395 -5.254371721505722 24.72919408022176 1.0547565761727404 0.9830388781954141 0.10261297619484433 0.07473637690448734 906.2639757817419 3170938.9366906453 0.020407458631719288 0.034390089939905735 5.567090463228903e-06 5.254371721505722 -0.0717176979773263 ERS(ph)KDFQVK ddPTM_KYSE-520_SHP099_60min_R1 1 ERSKDFQVK 9 2 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 ERS(1)KDFQVK 53.034 0.040105 556750000.0 266620.0 243010.0 198160.0 170140.0 173810.0 206040.0 154200.0 201220.0 238420.0 168620.0 True False 251830.05710620718 231335.4348345537 210933.71066721025 186310.05444554373 187487.8581563788 204754.02793334285 169788.04084697523 200522.0147851011 195128.9380790978 167126.1579843749 1.5068261015714337 1.3841964514985254 1.2621226575850026 1.1147869172159297 1.1218343101856476 1.2251465025150992 1.0159273862015614 1.199824235795862 1.1675547408762963 1.0 17.350578030941094 -4.735226721178295 1.45574323198348 1.1265060074050937 1.525846373592053 0.7869222081988666 0.06860186555669545 0.2414867621949119 0.8339981928280321 0.01991213014824901 0.1099869800658172 1.8398112867975195e-05 4.735226721178295 0.39934036618695945 ERS(ph)LS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 ERSLSPR 7 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 ERS(1)LS(1)PR;ERS(1)LS(1)PR 83.775 0.03337 1476670000.0 2163200.0 1985720.0 2065170.0 2091000.0 1979620.0 2070690.0 2057600.0 2034330.0 2454800.0 2067660.0 True False 2043202.9837677097 1890323.030573514 2198294.1625888315 2289728.0113179283 2135404.8315029684 2057766.0556265456 2265602.2882408304 2027273.3840461934 2009070.2004721498 2049342.1410151375 0.9970043278159562 0.9224048013950205 1.0726828471403564 1.1172990422105487 1.0419952768087812 1.0041105457418815 1.105526618956154 0.9892312969478038 0.9803488447648673 1.0 20.966729434073255 -4.764457305720238 24.999999913632635 1.042562366032319 0.9597045601480039 0.2992696234397709 0.04821308151914868 86.49668492409451 716551.5776164732 0.012979873269419925 0.029050870847709465 1.7200564268789803e-05 4.764457305720238 -0.08285780588431524 ERS(ph)LS(ph)RER ddPTM_KYSE-520_SHP099_60min_R1 1 ERSLSRER 8 2 P84103 P84103 SRSF3 Serine/arginine-rich splicing factor 3 2 ERS(1)LS(1)RER 64.265 0.035128 85583000.0 200740.0 162070.0 207760.0 156630.0 170900.0 161020.0 145770.0 153230.0 246490.0 161080.0 True False 189604.55203473108 154283.91392797037 221152.54202775334 171516.0681074733 184348.85771201382 160015.01445266383 160505.85417810341 152698.48089415094 201733.62950724302 159652.95651834377 1.1876043899816284 0.9663705407813321 1.3852079338245353 1.0743056179342754 1.1546848973688286 1.0022677809557412 1.0053421977165933 0.9564400448582123 1.2635759080607085 1.0 17.28457974400538 -6.249271369203812 23.223106426613253 1.0402912558872972 1.151689142707812 0.1559170491518892 0.12543475291936768 559.4245332551893 1067680.9509489918 0.04035826040408012 0.04001731712019088 5.632855764614958e-07 6.249271369203812 0.11139788682051477 ERS(ph)PALK ddPTM_KYSE-520_SHP099_60min_R1 8 ERSPALK 7 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK;ERS(1)PALK 99.375 0.0054387 139664200000.0 61915900.0 52046200.0 49219300.0 48762200.0 52296700.0 49824500.0 50916400.0 51148100.0 57067500.0 47934500.0 True False 58481301.600713395 49545822.42906109 52392054.83166437 53396544.827109925 56412152.76248022 49513526.81404016 56063526.60817716 50970679.17915627 46705480.55460492 47509837.622476704 1.2309303615267702 1.0428539626416482 1.102762237328252 1.123905016291789 1.1873783533158586 1.0421741957420523 1.1800403750833648 1.072844735529937 0.9830696733955738 1.0 25.501722940174187 -7.600063412368843 3.9258350951337952 0.9930524423086453 1.1245157812962074 0.4792065122778525 0.057128421932401294 0.19328946383650475 5.680160009663293 0.04141936741065805 0.014106307253137617 2.5115196917803824e-08 7.600063412368843 0.13146333898756213 ERS(ph)PALKS(ph)PLQSVVVR ddPTM_KYSE-520_SHP099_60min_R1 7 ERSPALKSPLQSVVVR 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 ERS(1)PALKS(0.999)PLQS(0.001)VVVR;ERS(1)PALKS(0.731)PLQS(0.269)VVVR;ERS(1)PALKS(0.792)PLQS(0.208)VVVR;ERS(1)PALKS(1)PLQSVVVR;ERS(1)PALKS(0.967)PLQS(0.033)VVVR;ERS(1)PALKS(0.682)PLQS(0.318)VVVR;ERS(1)PALKS(0.999)PLQS(0.001)VVVR 169.19 2.3843e-08 78633280000.0 42894880.0 39108360.0 36538370.0 35472530.0 34825550.0 36289900.0 34719530.0 37489420.0 48433070.0 37057020.0 True False 40515415.49757671 37229535.682754844 38893691.79365908 38843828.585994996 37566122.65472569 36063401.27304508 38229318.92235917 37359377.95211637 39638845.38633765 36728723.63272535 1.103098923412558 1.0136354329934643 1.0589448242901842 1.0575872163274709 1.0227995677272657 0.981885502846947 1.040856178522272 1.0171706026514111 1.079232858258635 1.0 25.130405425766195 -4.2525429525617575 24.185100032626977 1.031111888800007 1.1030989827902544 0.37815004963223486 0.028011180313804254 819.9586421957758 2228996.562662487 0.006971625509498604 0.08004496317519101 5.5905823289890384e-05 4.2525429525617575 0.07198709399024739 ERS(ph)PALKSPLQS(ph)VVVR ddPTM_KYSE-520_SHP099_60min_R1 3 ERSPALKSPLQSVVVR 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 ERS(1)PALKS(0.348)PLQS(0.652)VVVR;ERS(0.995)PALKS(0.201)PLQS(0.803)VVVR;ERS(1)PALKS(0.497)PLQS(0.503)VVVR 151.0 5.440599999999999e-06 53057900000.0 24709400.0 21755700.0 22519300.0 22204100.0 21938600.0 21442000.0 21667000.0 22459900.0 27404600.0 21979300.0 True False 23338720.325032268 20710523.51602855 23970930.110153936 24314370.988093935 23665043.00644114 21308172.52449393 23857311.809542198 22381991.849080093 22428615.453747384 21784580.501636654 1.0713412784459564 0.9506964577294746 1.1003622543180496 1.116127574100737 1.0863208040505168 0.9781309547316308 1.0951467166305922 1.0274235874038775 1.0295637986722923 1.0 24.37680399623737 -9.454986416604116 8.882162383863129 1.0000038251801433 1.050574959623949 0.07942986472798974 0.05164578473787354 0.0 0.0 0.05063115952387144 0.012279859921436445 3.5076284456414157e-10 9.454986416604116 0.05057113444380579 ERS(ph)PALKSPLQSVVVR ddPTM_KYSE-520_SHP099_60min_R1 4 ERSPALKSPLQSVVVR 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 ERS(1)PALKSPLQSVVVR;ERS(1)PALKSPLQSVVVR;ERS(1)PALKSPLQSVVVR;ERS(0.983)PALKS(0.017)PLQS(0.001)VVVR 186.63 2.7988e-12 21583630000.0 3871300.0 4848260.0 5908610.0 2804850.0 3726290.0 2905440.0 2581730.0 2225010.0 5829940.0 2621710.0 True False 3656551.27175478 4615342.312213374 6289488.454710254 3071422.100691095 4019527.8233101214 2887306.0712417574 2842716.4636566844 2217291.959631239 4771369.856827677 2598483.689059514 1.4071865400387482 1.7761675132484034 2.4204456164920742 1.1820055340823612 1.546874371478135 1.1111503541077754 1.0939904974679933 0.8533022427528717 1.8362131257227978 1.0 21.30923857241819 -5.301400338801404 24.98151038118589 1.2281634461533657 1.858756886990322 0.4095889153063763 0.34984807371128934 487.50501876083564 304761.722439705 0.09788443115159372 0.145188313381786 4.995738084487607e-06 5.301400338801404 0.6305934408369562 ERS(ph)PS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 1 ERSPSPLR 8 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 ERS(1)PS(1)PLR 79.20100000000001 0.012782 3860900000.0 3344900.0 2873500.0 2614000.0 2899700.0 2806600.0 2779200.0 2848800.0 3107500.0 3151100.0 2881100.0 True False 3159351.7291071652 2735452.7467885665 2782502.6225478807 3175286.616173404 3027463.452630419 2761853.981908107 3136784.5056087063 3096720.8077959535 2578939.6727667344 2855575.69546188 1.106379961885812 0.9579338944282884 0.9744103884095499 1.111960233174562 1.060193731667385 0.9671793979397161 1.0984770988889305 1.0844471091126404 0.9031242550723557 1.0 21.445350197315406 -7.759217558881356 24.999418706766864 0.9515621276636389 1.0417700062610695 0.2771219477693795 0.06024916671414928 75.87761265062719 853837.8433715184 0.04588211580584875 0.015426118009116594 1.740934537521441e-08 7.759217558881356 0.09020787859743062 ERS(ph)PS(ph)PLRGNVVPS(ph)PLPTR ddPTM_KYSE-520_SHP099_60min_R1 8 ERSPSPLRGNVVPSPLPTR 19 2 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 3 ERS(1)PS(1)PLRGNVVPS(0.998)PLPT(0.002)R;ERS(1)PS(1)PLRGNVVPS(0.996)PLPT(0.004)R;ERS(1)PS(0.999)PLRGNVVPS(0.979)PLPT(0.022)R;ERS(1)PS(1)PLRGNVVPS(0.999)PLPT(0.001)R;ERS(1)PS(1)PLRGNVVPS(0.999)PLPT(0.001)R;ERS(1)PS(1)PLRGNVVPS(0.834)PLPT(0.167)R;ERS(0.997)PS(0.992)PLRGNVVPS(0.941)PLPT(0.07)R;ERS(1)PS(1)PLRGNVVPS(0.997)PLPT(0.003)R 99.219 0.00035206 12664550000.0 5770640.0 5505690.0 5575370.0 4480760.0 4662450.0 4542010.0 3967500.0 4225460.0 6877900.0 4372080.0 True False 5450531.095714358 5241188.38819083 5934767.271107403 4906610.083210384 5029358.289288348 4513661.630816934 4368573.619068575 4210802.865489773 5629046.737749464 4333346.772626773 1.2578109672977713 1.2095012615419523 1.3695574304361258 1.1322911229271668 1.1606175441712152 1.0416109920694987 1.0081292470439536 0.971720724519188 1.2990067569268793 1.0 22.047050261076095 -5.687306390016122 1.7933340169776781 1.0631327855071342 1.2694122422166736 0.4459112278381623 0.09759780964787249 0.3176752502184965 2.1036034695117007 0.0331280712024554 0.04651622707343324 2.0544406991146037e-06 5.687306390016122 0.2062794567095394 ERS(ph)PS(ph)PLRGNVVPSPLPTR ddPTM_KYSE-520_SHP099_60min_R1 10 ERSPSPLRGNVVPSPLPTR 19 2 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(0.999)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR;ERS(1)PS(1)PLRGNVVPSPLPTR 108.49 8.1946e-05 58928870000.0 12934960.0 12308360.0 12558480.0 11610980.0 11805300.0 12585500.0 12335780.0 12291150.0 15744970.0 11887090.0 True False 12217431.983596526 11717047.910374973 13368019.715078464 12714484.048231583 12734309.947031226 12506949.226145806 13582801.02801103 12248514.869425965 12886080.34639399 11781779.63061609 1.036976786753705 0.9945057773722991 1.1346350156083702 1.079164985838962 1.080847745101249 1.061550089907071 1.1528649706462692 1.0396150032883844 1.0937295341111515 1.0 23.490054138044403 -4.745083458461438 24.99792106767985 1.0836166069353512 1.015741264204598 0.26942214448267565 0.042242966598361 282.8088849866763 432229.91625983483 0.01000064557176996 0.026294936440755083 1.7985252589421945e-05 4.745083458461438 -0.06787534273075324 ERS(ph)PS(ph)PLRGNVVPSPLPTRR ddPTM_KYSE-520_SHP099_60min_R1 1 ERSPSPLRGNVVPSPLPTRR 20 3 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 ERS(1)PS(1)PLRGNVVPSPLPTRR 103.12 0.0013728 2259200000.0 327220.0 336890.0 363400.0 184540.0 209400.0 251070.0 180320.0 179880.0 486490.0 224620.0 True False 309068.4543031016 320705.2987178006 386825.3454605579 202078.62611602573 225878.58867697913 249502.97900031225 198548.50535360945 179256.0382643075 398155.6794148996 222630.04155171572 1.3882603270830667 1.4405302019552582 1.737525370630183 0.9076880402462845 1.0145916835958941 1.1207066991556667 0.8918315963548331 0.8051745263797533 1.7884184750619572 1.0 17.764288756574725 -5.267005096528122 24.981167741831662 1.0590640620948626 1.5139477925190645 0.36416063690894895 0.26976653583389204 465.6314644713245 2089942.1807946372 0.07397282472874586 0.11328268031556521 5.4074797712826616e-06 5.267005096528122 0.45488373042420194 ERS(ph)PS(ph)PSFR ddPTM_KYSE-520_SHP099_60min_R1 3 ERSPSPSFR 9 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 2 ERS(0.982)PS(0.998)PS(0.02)FR;ERS(0.997)PS(0.801)PS(0.202)FR;ERS(0.621)PS(0.803)PS(0.576)FR 100.02 0.010609 4056400000.0 3325460.0 3037800.0 2742220.0 2607370.0 2723680.0 3069350.0 2857550.0 3006760.0 3490100.0 3091830.0 True False 3140990.1046598405 2891859.5281692417 2918987.8889071327 2855173.660865621 2938018.1203806815 3050193.0481324242 3146419.0410004794 2996330.251343057 2856385.8182612993 3064438.791607344 1.024980532573256 0.9436832401708432 0.952535876031017 0.9317117603018071 0.9587458977569093 0.9953512716540677 1.0267521249299079 0.9777745470228293 0.9321073163817647 1.0 21.54719145834671 -6.251343516603528 23.249463339272314 0.9875301527024719 0.9590501508812714 0.1187793297956492 0.03208545790432841 547.0646877869082 1259818.0749175102 0.011001748118518982 0.010861805201725347 5.606043758921977e-07 6.251343516603528 -0.028480001821200474 ERS(ph)PSPLR ddPTM_KYSE-520_SHP099_60min_R1 6 ERSPSPLR 8 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 ERS(0.956)PS(0.044)PLR;ERS(0.949)PS(0.051)PLR;ERS(0.823)PS(0.177)PLR;ERS(0.98)PS(0.02)PLR;ERS(0.858)PS(0.142)PLR;ERS(0.975)PS(0.025)PLR 83.499 0.0046708999999999995 5008900000.0 2309044.0 2061259.0 2130225.0 1688417.0 1967204.0 2062359.0 1928829.0 1753795.0 2411179.0 1987279.0 True False 2180956.7263549035 1962233.0236271643 2267542.7119805077 1848883.6440389196 2122011.76294034 2049487.052487771 2123813.8588769804 1747711.4944838295 1973369.6744762238 1969673.2541396688 1.1072682851184477 0.9962226067207506 1.1512278532567803 0.9386753057407439 1.0773420202972757 1.0405213393543102 1.078256941557872 0.887310365214463 1.0018766667663208 1.0 20.909524892544095 -7.243070539024372 24.979084885167325 0.958445127644721 1.0527897015975771 0.3145845779779317 0.06241401492350314 863.2036277464367 1173839.8759516722 0.027353426535761942 0.015754108558864388 5.7138582344583226e-08 7.243070539024372 0.09434457395285611 ERS(ph)PSPSFR ddPTM_KYSE-520_SHP099_60min_R1 2 ERSPSPSFR 9 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 ERS(0.991)PS(0.009)PSFR;ERS(0.975)PS(0.025)PSFR 90.926 0.0037945 1022600000.0 682230.0 511540.0 568670.0 484160.0 547400.0 619320.0 622140.0 560230.0 646120.0 541610.0 True False 644385.3419082118 486964.85056280607 605327.3781041704 530174.4208319887 590477.2657200487 615454.5941549102 685031.9827012776 558286.6928886652 528800.8953597301 536811.7567662039 1.2003934969495444 0.9071426704517809 1.1276343531496218 0.9876356360482881 1.0999708152390886 1.1464998416995502 1.2761121083263227 1.0400045935130557 0.9850769635621771 1.0 19.034056742924538 -3.937125733233648 20.866733905342606 1.0734006966524368 3.805148495292942 0.13862410154821536 0.09969156575673316 1024.3821689276251 363832.2750583227 0.024676811096926456 8997.271631604875 0.00011557775828841559 3.937125733233648 2.731747798640505 ERS(ph)PYK ddPTM_KYSE-520_SHP099_60min_R1 2 ERSPYK 6 1 F8W0Q9;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8;F8WF16;B7Z8L1;F8W6A0;Q8NEY8-5;Q8NEY8-6;Q8NEY8-3;F8VWU8;F8VPY7 F8W0Q9 PPHLN1 Periphilin-1 1 ERS(0.999)PY(0.001)K;ERS(0.997)PY(0.003)K 62.54600000000001 0.035058 1127380000.0 1677320.0 1137900.0 803410.0 1345070.0 1509260.0 1934790.0 2048310.0 1261360.0 1351560.0 2602450.0 True False 1584275.7159454776 1083233.5759772793 855199.0941014506 1472905.0483899596 1628030.1754852794 1922714.25793609 2255373.1643791683 1256984.6365636378 1106150.7740549685 2579394.3176754653 0.6142045460397918 0.41995656443621343 0.33155035205014755 0.5710274843581623 0.6311676211462117 0.7454130780860324 0.8743809152885539 0.48731775050835374 0.4288412851323271 1.0 21.298600907270895 -5.6195449506873 2.9027570783566685 0.6824815234882533 0.4515355729439083 0.2827738015455167 0.1701889033695739 0.37058810423401445 6.291124683113286 0.05451153865123332 0.07422486479047238 2.401347708853035e-06 5.6195449506873 -0.23094595054434502 ERS(ph)PYKR ddPTM_KYSE-520_SHP099_60min_R1 1 ERSPYKR 7 2 F8W0Q9;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8;F8WF16;B7Z8L1;F8W6A0;Q8NEY8-5;Q8NEY8-6;Q8NEY8-3;F8VWU8;F8VPY7 F8W0Q9 PPHLN1 Periphilin-1 1 ERS(0.98)PY(0.02)KR 48.602 0.063538 63527000000.0 1338200.0 1264600.0 955040.0 995030.0 1064000.0 1164700.0 1087800.0 1012700.0 1291700.0 1051800.0 True False 1263967.3783644375 1203846.7177967012 1016603.4065180278 1089597.3520333213 1147730.7466681255 1157430.6752764718 1197765.4399049247 1009187.1800659562 1057159.8411071666 1042481.870288017 1.212459817661125 1.1547891163460735 0.9751761018512106 1.045195492687357 1.1009599105555958 1.1102645602428527 1.1489556548105782 0.9680620918492692 1.0140798331726328 1.0 19.99159086342768 -4.579098434442716 6.372755603351223 1.0523974207420534 1.1989901107522618 0.4924582083335737 0.057097368755865345 0.15578206157176114 12.907787892200869 0.015653183111963745 0.04298883989293387 2.6357339193254862e-05 4.579098434442716 0.14659269001020836 ERSDS(ph)GGSSSEPFDR ddPTM_KYSE-520_SHP099_60min_R1 3 ERSDSGGSSSEPFDR 15 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 ERS(0.004)DS(0.975)GGS(0.018)S(0.002)S(0.001)EPFDR;ERS(0.016)DS(0.616)GGS(0.035)S(0.332)S(0.001)EPFDR;ERS(0.003)DS(0.967)GGS(0.028)S(0.002)S(0.001)EPFDR 175.26 3.6933e-08 1411070000.0 2174930.0 1918590.0 2166850.0 1895590.0 2034690.0 2049230.0 1828700.0 2143850.0 2841940.0 2100910.0 True False 2054282.2972845358 1826418.0565376987 2306528.6180825825 2075746.303670086 2194808.52719753 2036439.995446727 2013562.8423921077 2136413.484728354 2325915.3354773563 2082297.571883246 0.9865459793177528 0.8771167393168845 1.107684439163294 0.9968538270890672 1.0540321214573227 0.9779774144407971 0.9669909188680588 1.0259885587803692 1.1169946922493794 1.0 20.98974482182497 -4.751808900868258 24.99988280404074 1.0271931735049382 0.9318313786947766 0.34968347210577977 0.053813374240225045 223.85579940945468 581098.6243660334 0.01354773845525196 0.0348740447929672 1.7708880166116078e-05 4.751808900868258 -0.0953617948101616 ERSDYDRS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 ERSDYDRSR 9 2 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9;A0A087X0F4 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 1 ERSDYDRS(1)R;ERSDYDRS(1)R;ERSDYDRS(1)R 129.74 0.00044274 3644580000.0 888226.0 1036698.0 1064903.0 887136.0 908091.0 792637.0 722047.0 837605.0 1278187.0 796602.0 True False 838954.3331453662 986893.4719645763 1133548.3512850436 971449.1387128361 979552.5953689909 787689.8584692335 795038.5572596366 834699.5437534775 1046100.4612721577 789544.7260269773 1.0625798710188594 1.2499525858790372 1.4356987184109344 1.2303915239877663 1.240654978848559 0.9976507124972165 1.0069582267496162 1.0571909560509904 1.3249413577064593 1.0 19.590661468438288 -6.183667814760977 7.140706383786839 1.0767828811492013 1.2551313682749043 0.31502370641085964 0.12225540202605067 0.33601641759982526 26.786852566755698 0.04182633559933379 0.04181818632062379 6.551370868587846e-07 6.183667814760977 0.17834848712570306 ERSLS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 ERSLSR 6 1 P84103 P84103 SRSF3 Serine/arginine-rich splicing factor 3 1 ERSLS(1)R 75.825 0.049911000000000004 1788400000.0 2746400.0 2513100.0 2001300.0 2181300.0 2420200.0 2808800.0 2330500.0 2035900.0 2968700.0 2234700.0 True False 2594051.7171873325 2392366.903759994 2130307.0001932187 2388610.096168242 2610655.9709456726 2791269.23732854 2566089.6834881683 2028837.9380826335 2429658.914836918 2214902.2965702945 1.1711811041074538 1.0801229957025633 0.9618063078863257 1.0784268452233439 1.178677711873878 1.260222286847926 1.1585566042627145 0.9159943268035905 1.096959860757365 1.0 21.078811629566143 -7.244125853315847 24.7082483681152 1.0048578081657469 1.124086068671932 0.3056170360932704 0.08466098860702886 961.3493528964278 1371950.3527705604 0.044345710472787715 0.025515318646339498 5.6999906947235175e-08 7.244125853315847 0.11922826050618518 ERSPALK ddPTM_KYSE-520_SHP099_60min_R1 4 ERSPALK 7 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ;;; 105.81 0.0042545000000000005 1227570000.0 1701670.0 1504390.0 1439270.0 1452010.0 1522010.0 1526220.0 1518110.0 1568670.0 1772110.0 1473710.0 False True 1607274.9729049536 1432116.8462645719 1532047.6471134236 1590008.5938372759 1641783.5279477003 1516694.2948574354 1671575.3741258204 1563228.649900332 1450339.49525774 1460654.0759290305 1.100380301806002 0.9804627049383284 1.0488778091684603 1.0885593105444704 1.124005714291705 1.038366523499249 1.1444019509291659 1.0702250968670048 0.9929383823033321 1.0 20.47818311705276 -3.8984889539647583 20.80361844918588 1.0605526987398453 6.252969118882507 0.0540891480893092 0.05216911875739398 2882.1016009538284 589424.6386475577 0.012727702505897928 1484.6663023638084 0.0001263313235058466 3.8984889539647583 5.192416420142662 ERSPS(ph)PS(ph)FR ddPTM_KYSE-520_SHP099_60min_R1 1 ERSPSPSFR 9 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 2 ERS(0.319)PS(0.685)PS(0.995)FR 92.792 0.012101 1116900000.0 1338500.0 1041600.0 959870.0 956410.0 1061600.0 1091000.0 966340.0 1176900.0 1236700.0 1192300.0 True False 1264250.7367664024 991559.9725265253 1021744.7560463017 1047306.9188448472 1145141.8803222568 1084190.6643140991 1064027.0777695582 1172817.6085905244 1012146.4546699967 1181737.1495953635 1.0698239766764481 0.8390698158774509 0.8646125379033361 0.886243543416955 0.9690326488545805 0.917455006542982 0.9003923403219487 0.9924521785509636 0.856490341372922 1.0 20.172477746002254 -5.744618596607558 24.98416812611133 0.9358883640112656 0.9059237200220135 0.020286781381436914 0.07052572505482554 966.0872748489483 1434938.7817409637 0.020197395557387855 0.026001492309208143 1.8004514022306332e-06 5.744618596607558 -0.029964643989252138 ERTESEVPPRPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 ERTESEVPPRPASPK 15 2 Q9Y3L3;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;A0A3B3IU28 Q9Y3L3 SH3BP1 SH3 domain-binding protein 1 1 ERTES(0.001)EVPPRPAS(0.998)PK;ERTESEVPPRPAS(1)PK;ERTESEVPPRPAS(1)PK;ERTESEVPPRPAS(1)PK;ERTESEVPPRPAS(1)PK;ERTESEVPPRPAS(1)PK;ERTESEVPPRPAS(1)PK 133.92 1.0455e-05 6145260000.0 3240110.0 2849400.0 2659440.0 2722210.0 2735640.0 2699830.0 2425630.0 2567020.0 3505070.0 2678200.0 True False 3060374.6393008446 2712510.5469634035 2830871.757654449 2980928.0199377188 2950919.304337589 2682979.3595189084 2670836.352267497 2558115.6067669713 2868637.6436242885 2654473.231608073 1.152912224866128 1.0218639670817744 1.066453307551161 1.1229828895776357 1.1116779288634715 1.0107389020056405 1.0061643570048402 0.9636999071251781 1.080680569487783 1.0 21.339994162350706 -6.271448490940563 23.755180159341094 1.0096072051335847 1.0910539505489911 0.48773757209174395 0.04234150876099834 321.26890145640573 762482.1346947064 0.014754929457824022 0.013180892822325768 5.352436320384978e-07 6.271448490940563 0.08144674541540642 ERVDDSTGTVIS(ph)DVEEDAGELSR ddPTM_KYSE-520_SHP099_60min_R1 6 ERVDDSTGTVISDVEEDAGELSR 23 1 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 ERVDDSTGTVIS(1)DVEEDAGELSR;ERVDDSTGTVIS(0.999)DVEEDAGELS(0.001)R;ERVDDS(0.001)T(0.003)GT(0.002)VIS(0.995)DVEEDAGELSR;ERVDDSTGTVIS(1)DVEEDAGELSR;ERVDDSTGTVIS(1)DVEEDAGELSR;ERVDDSTGTVIS(1)DVEEDAGELSR 227.25 1.4059e-21 1321863000.0 608025.0 572669.0 587309.0 519091.0 571061.0 563227.0 467051.0 539942.0 736935.0 551098.0 True False 574296.6411822125 545157.1216463064 625167.8778676254 568425.2525696005 616000.251807375 559711.6913745521 514265.0730584988 538069.0672254099 603126.1806195793 546215.7004677559 1.0514099845361626 0.9980619765771233 1.1445439545810534 1.0406607720774508 1.127760061235623 1.024708170957442 0.9415054759833964 0.9850853184275561 1.1041904875731101 1.0 19.059111258077593 -6.509366785716183 24.619516787127314 1.0031173441035297 1.0711522640450128 0.24414112014624212 0.05440508814035592 738.222444721802 1345086.6549169268 0.019722154422873357 0.01664793384321182 3.094804461604641e-07 6.509366785716183 0.06803491994148314 ERVPS(ph)VAEAPQLRPAGTAAAK ddPTM_KYSE-520_SHP099_60min_R1 6 ERVPSVAEAPQLRPAGTAAAK 21 2 Q63ZY3-3;Q63ZY3;Q63ZY3-2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 ERVPS(1)VAEAPQLRPAGTAAAK;ERVPS(1)VAEAPQLRPAGTAAAK;ERVPS(1)VAEAPQLRPAGTAAAK;ERVPS(1)VAEAPQLRPAGTAAAK;ERVPS(1)VAEAPQLRPAGTAAAK;ERVPS(1)VAEAPQLRPAGTAAAK 252.91 2.6044000000000002e-27 28122630000.0 7944550.0 8021390.0 7335690.0 7276470.0 7190840.0 8269940.0 8478770.0 8977970.0 9896720.0 8881550.0 True False 7503849.974432221 7636030.38404814 7808560.314918987 7968023.521049528 7756718.197717124 8218324.236881515 9335886.816420928 8946827.517543959 8099725.124008757 8802866.37674134 0.8524325660853673 0.8674481762240333 0.887047466215155 0.9051623846185366 0.8811582348008465 0.9335963861266502 1.0605507816281203 1.0163538936797891 0.9201236026267079 1.0 23.069541937866212 -6.525728241266848 4.666441120283997 1.0010455497009416 0.8816243978876379 0.7265350900353902 0.03477867549484578 0.10556489677032177 6.126609102220052 0.013773328059557183 0.011100415740502688 2.980380812215535e-07 6.525728241266848 -0.1194211518133037 ES(ph)ADRQVLMQEEEIK ddPTM_KYSE-520_SHP099_60min_R1 1 ESADRQVLMQEEEIK 15 1 O95613-2;O95613 O95613-2 PCNT Pericentrin 1 ES(1)ADRQVLMQEEEIK 74.89 0.035229 0.0 113880.0 123750.0 161970.0 89651.0 183320.0 129370.0 114000.0 103750.0 152280.0 150970.0 True False 107562.84938584808 117804.86424746306 172410.84536116297 98171.40408544391 197746.2410518806 128562.5538426352 125524.23253278309 103390.11546543204 124629.79066640821 149632.52325288273 0.7188467256150199 0.7872945111563071 1.1522284167445622 0.6560833296885047 1.321545856161795 0.8591885710926711 0.8388833510522574 0.6909601817694415 0.832905761107702 1.0 17.191064259528844 -10.035852784526696 6.443107854746131 1.0000000743557131 0.8788233626714795 0.034805972030553245 0.19842339520135083 2.0907207875254065e-07 3.133806282826463e-08 0.18951392422664134 0.04596384964147651 9.207616350972475e-11 10.035852784526696 -0.1211767116842336 ES(ph)CGSSVLTDFEGK ddPTM_KYSE-520_SHP099_60min_R1 2 ESCGSSVLTDFEGK 14 0 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 ES(0.999)CGS(0.001)SVLTDFEGK;ES(1)CGSSVLTDFEGK 178.14 9.501200000000001e-09 167300000.0 270940.0 238366.0 244430.0 245198.0 267660.0 224766.0 281360.0 294200.0 286610.0 225062.0 True False 255910.41809450043 226914.53956533945 260186.3489018279 268501.54419853317 288723.3192229238 223363.15202128584 309802.614608981 293179.4888667965 234568.8488501396 223068.12577558652 1.1472298751994459 1.0172432245816354 1.1663985968285917 1.2036750802696665 1.294327991590284 1.0013225836038813 1.3888251113054677 1.3143047122821312 1.0515569987176168 1.0 17.767124855922397 -4.937525358026582 6.808409291788832 1.197419131516948 1.0828774685273908 0.06872336711662752 0.1291916282286828 0.4510785656058941 38.99630242123932 0.032974013779113506 0.0694081122129237 1.154714560076441e-05 4.937525358026582 -0.11454166298955726 ES(ph)EELLK ddPTM_KYSE-520_SHP099_60min_R1 6 ESEELLK 7 0 O43303-2;O43303 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 ES(1)EELLK;ES(1)EELLK;ES(1)EELLK;ES(1)EELLK;ES(1)EELLK;ES(1)EELLK 144.09 0.0015425999999999999 3526500000.0 7597750.0 6605930.0 5998880.0 7165160.0 7307750.0 7049230.0 6561490.0 7242500.0 7528340.0 5932740.0 True False 7176287.661760869 6288571.207096923 6385577.4033473665 7846134.652116103 7882828.349590215 7005233.140790908 7224789.443171319 7217377.457912214 6161383.230007536 5880180.539201876 1.2204196136356922 1.0694520627678683 1.0859492086639382 1.3343356721460577 1.340575905286772 1.1913296018869748 1.2286679626595185 1.2274074596512028 1.0478221185439704 1.0 22.487429020136272 -7.842433528820105 4.28868102726316 1.0042025996837465 1.2116736047828394 0.4540207689136613 0.08314809033032503 0.21254893273415856 6.776307883826123 0.08809937724550228 0.023471613290687598 1.4373630329080067e-08 7.842433528820105 0.2074710050990929 ES(ph)GVGQTDWSGVEAGEFLK ddPTM_KYSE-520_SHP099_60min_R1 2 ESGVGQTDWSGVEAGEFLK 19 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 ES(1)GVGQTDWSGVEAGEFLK;ES(1)GVGQTDWSGVEAGEFLK 241.08 4.0101999999999995e-26 83138000.0 178986.0 178813.0 151617.0 177377.0 171820.0 187226.0 187399.0 193011.0 214630.0 223560.0 True False 169057.289780255 170222.555076215 161390.47441577716 194234.85674966036 185341.25647792997 186057.45308604147 206343.1197579917 192341.4898901061 175658.60238200164 221579.4323270481 0.7629647210699991 0.768223626572745 0.7283639673630318 0.8765924468249945 0.8364551462717393 0.8396873804217682 0.9312376947217383 0.8680475794622166 0.7927568029993508 1.0 17.75746444672242 -1.0000000476038287 0.05111025506502451 1.273755492973867 0.02250857404513621 0.6099815587323283 0.049111463803335434 328.16638842152196 1.267565902062588 7.1917865097478835 32.15720470516567 0.09999998903881398 1.0000000476038287 -1.2512469189287307 ES(ph)HTPVSIQEEIVGDFK ddPTM_KYSE-520_SHP099_60min_R1 4 ESHTPVSIQEEIVGDFK 17 0 E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-4;Q12830;A0A0A0MR81;F5H176 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF 1 ES(0.493)HT(0.493)PVS(0.013)IQEEIVGDFK;ES(0.5)HT(0.5)PVS(0.001)IQEEIVGDFK;ES(0.564)HT(0.436)PVSIQEEIVGDFK;ES(0.579)HT(0.42)PVSIQEEIVGDFK 186.06 2.2149999999999998e-12 416802000.0 823750.0 828940.0 681380.0 615647.0 639594.0 689820.0 640670.0 787650.0 1037150.0 777220.0 True False 778054.9453950869 789116.4781356929 725302.8450465467 674157.9057789803 689926.4090079446 685514.5775042641 705435.1759366514 784917.8259888923 848829.7044238579 770334.4354680101 1.010022283272831 1.0243816734692275 0.9415428048544852 0.8751496424658745 0.8956193274532582 0.8898921636390116 0.9157518390153107 1.0189312457673299 1.1018976503473568 1.0 19.555125392506046 -7.398512423842278 4.313414732059241 1.0535676678128054 0.9342624576755102 0.4667452485708692 0.05157269956891574 0.21856997924240143 6.5721469109851975 0.03464690965083994 0.01540949806924101 3.994731334352648e-08 7.398512423842278 -0.11930521013729523 ES(ph)KGSPVFLPR ddPTM_KYSE-520_SHP099_60min_R1 1 ESKGSPVFLPR 11 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 ES(0.983)KGS(0.017)PVFLPR 67.704 0.020878999999999998 522070000.0 930760.0 859810.0 904640.0 764520.0 884100.0 785940.0 698560.0 794630.0 1042600.0 804510.0 True False 879128.8873759399 818503.436998879 962954.5418751766 837179.750938681 953673.6401591068 781034.6569303598 769177.2620886052 791873.6139980356 853290.1218071776 797382.6672993089 1.1025181803280235 1.0264876207694669 1.2076441856162368 1.0499096422225511 1.1960049788756342 0.9794979110540251 0.9646275165395382 0.9930910796946061 1.070113706756662 1.0 19.604912720262266 -6.283657939468156 24.727767056808908 0.9987318166562257 1.1128741873954004 0.49178161833221923 0.05838523340642846 606.370731854458 674847.9369873198 0.019937509539158082 0.0175974382035874 5.204057189229911e-07 6.283657939468156 0.11414237073917477 ES(ph)LETENVLDDIK ddPTM_KYSE-520_SHP099_60min_R1 2 ESLETENVLDDIK 13 0 I6L8A6;Q99708-3;Q99708;Q99708-2;J3QSH7 I6L8A6 RBBP8 DNA endonuclease RBBP8 1 ES(0.984)LET(0.016)ENVLDDIK;ES(1)LETENVLDDIK 177.74 1.6589e-06 58277000.0 150622.0 124740.0 125680.0 122322.0 119794.0 136337.0 118884.0 144873.0 165211.0 136786.0 True False 142266.69740248722 118747.30316144273 133781.53389510998 133947.44610254982 129221.10626537737 135486.07021135764 130901.9549160297 144370.46937661243 135212.84703039093 135574.1824578976 1.0493642286699236 0.8758843388070554 0.9867773603330093 0.9880011346861489 0.9531394836587477 0.9993500809302882 0.9655374831906594 1.0648817257035388 0.9973347770131759 1.0 17.048722945048144 -7.231931912008396 24.792860343191453 1.0233311989736225 0.9714351765519567 0.18577626191277918 0.04450626563225099 882.5189936400395 741514.5509148756 0.019804118869798062 0.011430958307417697 5.8623006551826166e-08 7.231931912008396 -0.0518960224216658 ES(ph)LPIK ddPTM_KYSE-520_SHP099_60min_R1 1 ESLPIK 6 0 Q86V25-3;Q86V25-4;Q86V25-6;Q86V25-2;Q86V25 Q86V25-3 VASH2 Vasohibin-2 1 ES(1)LPIK 83.75299999999999 0.019072 199360000.0 801790.0 727760.0 654040.0 655450.0 695660.0 630580.0 631900.0 663870.0 788290.0 642900.0 True False 757313.1103712607 692797.3172099692 696200.4649009998 717743.7709317709 750404.4842360414 626644.3163182255 695778.6187496991 661567.1899184234 645156.4071737777 637204.406168631 1.1884932104045178 1.0872450198133532 1.0925857670807693 1.1263948647929245 1.1776511225778512 0.9834274688809811 1.0919237406615905 1.0382338595181417 1.0124795135252755 1.0 19.28139671734469 -6.261522366678107 24.99999999932146 1.031771959207266 1.1290742003386478 0.6431739028088693 0.04044433845492707 5.56894734219649 1677480.147405038 0.01383455813765656 0.013023413317934834 5.476178972679655e-07 6.261522366678107 0.09730224113138175 ES(ph)PGAAATSSSGPQAQQHR ddPTM_KYSE-520_SHP099_60min_R1 6 ESPGAAATSSSGPQAQQHR 19 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 ES(1)PGAAATSSSGPQAQQHR;ES(1)PGAAATSSSGPQAQQHR;ES(1)PGAAATSSSGPQAQQHR;ES(0.988)PGAAAT(0.001)S(0.008)S(0.001)S(0.003)GPQAQQHR;ES(1)PGAAATSSSGPQAQQHR;ES(1)PGAAATSSSGPQAQQHR 315.28 2.044e-53 3775130000.0 1061460.0 1179110.0 1050610.0 1714600.0 1121930.0 1097093.0 1084570.0 1062280.0 1209970.0 1000720.0 True False 1002578.6978319502 1122463.785719806 1118334.001635434 1877555.0684867108 1210219.5080915138 1090245.6356410154 1194208.9199831637 1058595.1986180157 990269.9488615298 991854.3993483783 1.010812371745911 1.1316820154825493 1.1275183155613864 1.89297448266622 1.2201584314054517 1.0991992739632728 1.2040163564004223 1.0672889078411956 0.998402537219284 1.0 19.91976882815872 -7.034360293240399 1.24803126227534 1.0046337943650303 1.2771237397897073 0.17351777802991597 0.22793415309396886 0.9260539009527939 2.699840665725886 0.18764642128743528 0.08482574592806527 9.239313570506384e-08 7.034360293240399 0.27248994542467697 ES(ph)PGSSEFFQEAVSHGK ddPTM_KYSE-520_SHP099_60min_R1 6 ESPGSSEFFQEAVSHGK 17 0 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 1 ES(0.969)PGS(0.015)S(0.015)EFFQEAVSHGK;ES(0.983)PGS(0.016)SEFFQEAVSHGK;ES(0.999)PGS(0.001)SEFFQEAVSHGK;ES(0.47)PGS(0.237)S(0.293)EFFQEAVSHGK;ES(0.984)PGS(0.016)SEFFQEAVSHGK;ES(0.943)PGS(0.028)S(0.028)EFFQEAVSHGK 291.57 8.5285e-38 2230240000.0 2117330.0 1693530.0 1539780.0 1798220.0 1781163.0 1702660.0 1607400.0 1667250.0 1748540.0 1625720.0 True False 1999877.4841072864 1612170.2767596433 1639036.6825351093 1969122.2881454416 1921330.3946688357 1692033.0673703428 1769891.6787122425 1661466.6988890772 1431049.2131063922 1611317.3855910217 1.241144359262122 1.0005293129561244 1.0172028783354312 1.222057371039399 1.1923972346168803 1.050092975164986 1.0984128232831403 1.0311231752021721 0.8881237339728025 1.0 20.619809262946106 -7.438771975141849 2.572129659761469 0.9446685795659713 1.1147550434048978 0.4144832760447319 0.08224706909488004 0.30602803292954756 3.8058994374177852 0.06349736043747863 0.023352618702806 3.641061586636159e-08 7.438771975141849 0.17008646383892656 ES(ph)PHFYR ddPTM_KYSE-520_SHP099_60min_R1 3 ESPHFYR 7 0 Q9HDC5 Q9HDC5 JPH1 Junctophilin-1 1 ES(1)PHFYR;ES(1)PHFYR;ES(1)PHFYR 105.52 0.0039479 1197590000.0 1555210.0 1626060.0 1405140.0 1643430.0 1520880.0 1673720.0 1708530.0 1611040.0 2077630.0 1460750.0 True False 1468939.4010657254 1547941.6368341802 1495717.5727034903 1799621.0930847547 1640564.603376521 1663273.6926450902 1881244.886045929 1605451.6782595639 1700384.7647901853 1447808.8914463029 1.01459481962313 1.0691615764894555 1.033090473155838 1.2429962985563692 1.1331361570363496 1.1488212998771865 1.2993737620761818 1.1088836984940618 1.174453876361796 1.0 20.46543975077939 -5.240359433665582 24.554113734535544 1.1672170917686688 1.0419701918799567 0.33674267422613713 0.07595534039969667 680.8086514671576 793010.7728471407 0.01954869695873834 0.033815622306192894 5.749638849621251e-06 5.240359433665582 -0.12524689988871218 ES(ph)PSLASR ddPTM_KYSE-520_SHP099_60min_R1 2 ESPSLASR 8 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7;H3BSK9 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 ES(0.984)PS(0.016)LASR;ES(0.999)PS(0.001)LASR 152.47 0.00012853 2682900000.0 3224800.0 2927200.0 3164300.0 2762900.0 2840900.0 2946700.0 2627300.0 2511300.0 2729000.0 2872000.0 True False 3045913.9155205777 2786572.9181832215 3368275.841059006 3025485.1853038264 3064462.667490109 2928308.552277133 2892893.1239770297 2502588.886441829 2233482.392491646 2846556.314382192 1.070034659118154 0.9789277324689115 1.1832809433773825 1.0628580119836724 1.076550866746232 1.0287196980723299 1.0162781988048932 0.8791636665670475 0.7846261046047123 1.0 21.440786210657404 -7.124251140444411 2.461069678322978 0.8709628748168585 1.0682544050441374 0.5729813132977941 0.06859284966018347 0.2021685946603998 2.3622547286871627 0.03941925590220359 0.019567149477885327 7.51188377007651e-08 7.124251140444411 0.19729153022727886 ES(ph)PSPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 5 ESPSPAPKPR 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 ES(0.951)PS(0.049)PAPKPR;ES(0.949)PS(0.051)PAPKPR;ES(0.998)PS(0.002)PAPKPR;ES(0.996)PS(0.004)PAPKPR;ES(0.885)PS(0.115)PAPKPR 87.641 0.0026436 2750470000.0 3475940.0 3001780.0 2978100.0 2602970.0 2838210.0 2853770.0 2782470.0 2969390.0 3676720.0 2933470.0 True False 3283122.679085401 2857569.9830363584 3170073.0911284764 2850355.486188534 3061560.979794116 2835958.5628777696 3063749.221890293 2959089.8791508325 3009120.3305686656 2907481.738005127 1.1291980397228591 0.9828333384466883 1.090315736016804 0.9803519825869008 1.052994053161175 0.9754003011635662 1.0537466776979256 1.0177501170415313 1.034957603081378 1.0 21.471338699432923 -4.2474884925358705 24.767318314478416 1.0229877598611208 1.1291981216076301 0.45144112018517046 0.035739959103180695 1858.182521488145 3298811.059470012 0.008009692860436362 0.1602361655246173 5.656027436186313e-05 4.2474884925358705 0.10621036174650933 ES(ph)PTQISIGAFPSTK ddPTM_KYSE-520_SHP099_60min_R1 7 ESPTQISIGAFPSTK 15 0 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 ES(0.998)PT(0.002)QISIGAFPSTK;ES(0.997)PT(0.003)QISIGAFPSTK;ES(1)PTQISIGAFPSTK;ES(0.986)PT(0.014)QISIGAFPSTK;ES(0.972)PT(0.028)QISIGAFPSTK;ES(0.999)PT(0.001)QISIGAFPSTK;ES(0.996)PT(0.004)QISIGAFPSTK 210.57 4.8557e-14 6094226000.0 5751802.0 5495633.0 4768341.0 4294009.0 4811098.0 5184884.0 4711236.0 5456205.0 6268683.0 5163519.0 True False 5432738.077126982 5231614.541566692 5075715.890475349 4702110.324319117 5189704.0411969265 5152523.21572094 5187493.712112454 5437278.698342818 5130448.187838657 5117774.238816992 1.0615431286360915 1.0222441040650545 0.9917819062781937 0.918780333969175 1.0140548994589025 1.0067898612331092 1.0136230068076582 1.0624303544111944 1.0024764572312581 1.0 22.287085076271097 -6.729298762336027 2.5017625394388716 1.0258221316618201 0.9986117579516416 0.04175294512815464 0.03714799325650841 0.7879525195753128 10.07963951461321 0.01823035166551712 0.012422446825300611 1.8650962018001535e-07 6.729298762336027 -0.027210373710178537 ES(ph)PVSAPLEGLICR ddPTM_KYSE-520_SHP099_60min_R1 7 ESPVSAPLEGLICR 14 0 A0A088AWL3;O75376-2;O75376 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 ES(1)PVSAPLEGLICR;ES(1)PVSAPLEGLICR;ES(1)PVSAPLEGLICR;ES(1)PVSAPLEGLICR;ES(1)PVSAPLEGLICR;ES(0.996)PVS(0.004)APLEGLICR;ES(1)PVSAPLEGLICR 322.26 8.362999999999998e-43 1225611000.0 695387.0 615533.0 555922.0 528697.0 532318.0 584270.0 527478.0 560345.0 612343.0 515090.0 True False 656812.4968903831 585961.8707461312 591757.6216266495 578944.2039214512 574208.3981248908 580623.3542060485 580800.6239291875 558401.2939805057 501156.9471108502 510526.7033339564 1.2865389657409068 1.147759494105893 1.1591119872128541 1.134013559213846 1.1247372456231295 1.1373026139755886 1.1376498430666067 1.093774900184276 0.9816468831857026 1.0 18.961626898340924 -1.000000000000104 0.11424613968957885 0.9311455517210787 1.8697517586881758 0.750439325176284 0.04030495963192812 55.07846166503743 0.4373736845177081 0.3392870686033584 8.180550734875254 0.09999999999997607 1.000000000000104 0.9386062069670971 ES(ph)RPSEER ddPTM_KYSE-520_SHP099_60min_R1 1 ESRPSEER 8 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 ES(0.986)RPS(0.014)EER 58.815 0.03855 472700000.0 99378.0 86795.0 84228.0 95046.0 97841.0 98311.0 105360.0 104560.0 111300.0 96380.0 True False 93865.30423486841 82625.23791804897 89657.47164956499 104079.14326337806 105540.5300608609 97697.40458238608 116010.81701450913 104197.30576448739 91090.72564467574 95526.14818250529 0.982613724312805 0.8649489117910545 0.938564710871331 1.0895356427910403 1.104833933628548 1.0227294457192238 1.214440435647707 1.0907726077829039 0.9535684980267858 1.0 16.543608072799614 -5.223562135161822 5.49180653786588 1.077659112675015 0.920197494875365 0.43795426860061737 0.07165560066570266 0.16762289462692478 13.803048520194507 0.01966036060166948 0.033859761965351974 5.9763753367492756e-06 5.223562135161822 -0.15746161779965007 ES(ph)RPSEEREWDREK ddPTM_KYSE-520_SHP099_60min_R1 1 ESRPSEEREWDREK 14 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 ES(0.627)RPS(0.373)EEREWDREK 92.977 0.0028591 1115500000.0 214050.0 260630.0 302810.0 217160.0 226680.0 206680.0 207990.0 208200.0 352070.0 179880.0 True False 202176.2198019038 248108.9435863946 322329.61711313063 237798.82110846534 244518.42636722827 205390.03345594648 229015.65898678562 207477.80279424507 288142.962962453 178286.40314452225 1.133996851335971 1.3916313258351671 1.8079315720551292 1.3338023366577272 1.3714922846304611 1.1520229800668171 1.2845379958736467 1.163733179507019 1.6161802463919754 1.0 17.44383715572864 -5.8423100903387715 2.648399049619832 1.258360856273915 1.448045489951973 0.12204435162526994 0.21456055802031543 0.5816303632111705 8.304122143449455 0.07146405253532188 0.08566116548251776 1.4377716292276955e-06 5.8423100903387715 0.189684633678058 ES(ph)SKVPR ddPTM_KYSE-520_SHP099_60min_R1 4 ESSKVPR 7 1 E5RJ29;Q9NYI0-2;Q9NYI0 E5RJ29 PSD3 PH and SEC7 domain-containing protein 3 1 ES(0.5)S(0.5)KVPR;ES(0.5)S(0.5)KVPR;ES(0.5)S(0.5)KVPR;ES(0.5)S(0.5)KVPR 82.45200000000001 0.0078202 15262100000.0 12547100.0 9939880.0 12113590.0 4552620.0 12024450.0 13411520.0 7604440.0 8142350.0 10000870.0 12944710.0 True False 11851087.350976266 9462353.244735934 12894451.393829295 4985299.636004888 12970705.805238288 13327813.728929263 8373171.0073824385 8114106.088288773 8184964.109416609 12830029.940231994 0.9236991188784376 0.7375160688490828 1.005021146006471 0.3885649261325686 1.0109645780767174 1.0387983341438927 0.6526228735543413 0.6324307991554112 0.637953625014581 1.0 23.613021201324543 ES(ph)SPEKEAEEGCPEK ddPTM_KYSE-520_SHP099_60min_R1 1 ESSPEKEAEEGCPEK 15 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.5)S(0.5)PEKEAEEGCPEK 78.32600000000001 0.0080086 817450000.0 1622400.0 1531100.0 1206500.0 1491500.0 1373600.0 1421400.0 1440400.0 1535300.0 1705400.0 1352600.0 True False 1532402.237825784 1457543.6577720451 1284272.920468253 1633251.711564172 1481694.5052850912 1412528.515358443 1586009.6889493072 1529974.4026417148 1395742.349635491 1340617.0163068757 1.1430574274278846 1.087218527023682 0.9579715197157208 1.218283590091557 1.105233252496567 1.053640598453441 1.1830445754884105 1.1412464440116386 1.041119374629806 1.0 20.354465720369905 -4.2556402344395385 22.45425974048005 1.0944591757617046 1.1430575101218878 0.03908401213579138 0.07589474441770966 658.1015816386239 2547828.194218534 0.01860902429274553 0.15293694505697644 5.550853501584481e-05 4.2556402344395385 0.04859833436018324 ES(ph)SPEKEAEEGCPEKESEEGCPK ddPTM_KYSE-520_SHP099_60min_R1 3 ESSPEKEAEEGCPEKESEEGCPK 23 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.5)S(0.5)PEKEAEEGCPEKESEEGCPK;ES(0.5)S(0.5)PEKEAEEGCPEKESEEGCPK;ES(0.57)S(0.43)PEKEAEEGCPEKESEEGCPK 301.36 5.2066e-49 8430200000.0 2652790.0 2531790.0 2037670.0 2121870.0 2198740.0 2292190.0 2140790.0 2319660.0 2811150.0 2147390.0 True False 2505634.450494242 2410159.00810573 2169021.468587273 2323531.886836523 2371768.3288807087 2277883.5919652916 2357201.94529699 2311613.640872717 2300716.023324619 2128365.795244141 1.1772574320133842 1.1323988637156543 1.0191018261212323 1.0916976264270377 1.1143612315986535 1.0702500467989338 1.1075173029768597 1.0860979095031715 1.0809777287652322 1.0 21.021314692734897 ES(ph)SPIPS(ph)PTSDRK ddPTM_KYSE-520_SHP099_60min_R1 2 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 ES(0.867)S(0.133)PIPS(0.993)PT(0.004)S(0.003)DRK;ES(0.5)S(0.5)PIPS(0.983)PT(0.009)S(0.008)DRK 116.78 0.00066905 1740450000.0 3631260.0 3302140.0 3064860.0 3153850.0 3376330.0 3232360.0 3412490.0 3607660.0 4030120.0 3153980.0 True False 3429826.769062658 3143500.2377868076 3262425.7795493854 3453590.955760423 3642027.962310141 3212185.6422569356 3757457.7918929537 3595145.869494173 3298351.799057686 3126038.190959306 1.0971800597260541 1.0055859991979634 1.0436295336968437 1.1047820739197685 1.1650618897885219 1.0275580290563222 1.2019871678982528 1.1500646025027959 1.0551220418857075 1.0 21.575903973244294 -5.278647601316063 6.102902975587416 1.1109730600865126 1.044264895739539 0.10963852179778744 0.06280669796570464 0.27243814453281046 42.07782077511806 0.017033239852761773 0.026658113167113136 5.264442647219805e-06 5.278647601316063 -0.06670816434697358 ES(ph)SPKKEETVAR ddPTM_KYSE-520_SHP099_60min_R1 7 ESSPKKEETVAR 12 2 Q68DK7;Q68DK7-2;J3KTC2;Q68DK7-3 Q68DK7 MSL1 Male-specific lethal 1 homolog 1 ES(0.908)S(0.092)PKKEETVAR;ES(0.5)S(0.5)PKKEETVAR;ES(0.575)S(0.397)PKKEET(0.029)VAR;ES(0.909)S(0.091)PKKEETVAR;ES(0.644)S(0.356)PKKEETVAR;ES(0.943)S(0.057)PKKEETVAR;ES(0.891)S(0.108)PKKEETVAR 132.84 4.0459e-05 11713230000.0 8513980.0 8302950.0 7654700.0 6801900.0 7776510.0 6951550.0 6882070.0 7141210.0 9899400.0 7475510.0 True False 8041692.557201658 7904063.8190179635 8148134.209953045 7448350.530934202 8388477.094710664 6908162.797903455 7577776.79813062 7116438.809280948 8101918.503566069 7409282.797258771 1.0853537079428068 1.0667785311072548 1.099719693917963 1.005272809088875 1.1321577707648258 0.9323659235222177 1.0227409326222758 0.9604760681983731 1.0934821527616079 1.0 22.82090246881681 -6.256436347458359 24.99985789718377 1.000650764864701 1.0744232515706507 0.37179261756331183 0.049311035201111436 466.89543457644083 2333053.165252254 0.015572626136775186 0.015084606845443667 5.540687452914822e-07 6.256436347458359 0.07377248670594971 ES(ph)SPLYS(ph)PTFSDSTSAVK ddPTM_KYSE-520_SHP099_60min_R1 1 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 ES(0.5)S(0.5)PLYS(0.853)PT(0.034)FS(0.113)DSTSAVK 227.41 3.643e-20 1080700000.0 2130000.0 2004700.0 1964700.0 2062500.0 2130400.0 2010400.0 1998500.0 2404700.0 2828700.0 2303600.0 True False 2011844.6539502672 1908391.2028839528 2091347.7056311453 2258519.3798867646 2298050.3596821176 1997852.3478799849 2200527.883480411 2396358.6569612003 2315079.3857241194 2283191.8961736816 0.881154430042365 0.8358435425783336 0.9159754417208466 0.9891938490460374 1.0065077593930396 0.8750260331722941 0.9637945400770719 1.0495651552448004 1.0139661890022809 1.0 21.1226206886431 -3.9151724313052165 0.341114394991958 1.0149393409577774 0.6763450049468844 0.522448294500888 0.046807367599605285 7.304962638111197 0.5699744133110229 0.04941062949669195 1.0710434968215286 0.00012157032247359668 3.9151724313052165 -0.33859433601089295 ES(ph)SPLYSPTFSDSTSAVK ddPTM_KYSE-520_SHP099_60min_R1 2 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.767)S(0.233)PLYSPTFSDSTSAVK;ES(0.5)S(0.5)PLYSPTFSDSTSAVK 258.96 2.3202e-28 5518100000.0 10222100.0 10170100.0 7593400.0 7261600.0 6900200.0 8399300.0 6847300.0 8075900.0 10047900.0 8781100.0 True False 9655059.735748842 9681513.130368669 8082882.713869571 7951740.280720346 7443206.483232514 8346876.853137863 7539491.9072081195 8047886.58782923 8223454.646946424 8703306.285592422 1.109355389655994 1.1123948546307723 0.9287140367850883 0.9136459202732841 0.8552159649435875 0.9590466633301649 0.8662790507199664 0.9246930216797974 0.9448655921209677 1.0 23.053132137605825 -4.771557249363813 6.094193621063464 0.9171235982769709 1.11263204688243 0.776993586434624 0.039925105358489026 0.05601090257227554 7.793191760030581 0.009878483320357822 0.02306422426726309 1.6921651659294058e-05 4.771557249363813 0.19550844860545913 ES(ph)SRDT(ph)SPVR ddPTM_KYSE-520_SHP099_60min_R1 1 ESSRDTSPVR 10 1 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4M5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 2 ES(0.863)S(0.137)RDT(0.611)S(0.388)PVR 122.39 0.0018357 125140000.0 330570.0 289080.0 262430.0 289010.0 307310.0 298980.0 253450.0 283170.0 313550.0 267840.0 True False 312232.6231250427 275192.1628820738 279346.6577028464 316477.4235059749 331493.54864528397 297113.95491900004 279071.1994336307 282187.74936237483 256617.22395227398 265467.1459763666 1.176162955972109 1.0366335987451079 1.0522833500749484 1.1921528833332524 1.2487177930288798 1.119211772237348 1.0512457140684188 1.0629855846173024 0.9666628350881488 1.0 18.01817379960997 -7.129611756973633 1.622381491234232 0.9966871895059402 1.1356988630902942 0.4745514079187536 0.06223599157120807 0.4175398934536635 2.0605813337804353 0.05001417304293975 0.02174939931111495 7.419732412397454e-08 7.129611756973633 0.13901167358435407 ES(ph)TGNMVTGQTVCK ddPTM_KYSE-520_SHP099_60min_R1 4 ESTGNMVTGQTVCK 14 0 Q15021;E7EN77 Q15021 NCAPD2 Condensin complex subunit 1 1 ES(1)TGNMVTGQTVCK;ES(0.999)T(0.001)GNMVTGQTVCK;ES(0.936)T(0.064)GNMVTGQTVCK;ES(0.979)T(0.021)GNMVTGQTVCK 261.91 1.1393999999999999e-24 2686020000.0 2606700.0 2278820.0 2017020.0 2009620.0 1979100.0 2155220.0 2085410.0 2256270.0 2616760.0 2192090.0 True False 2462101.1546723763 2169342.066621447 2147040.336546105 2200613.680585716 2134843.91046136 2141768.4725417322 2296223.5944402753 2248443.5259873774 2141622.3471514997 2172669.788020212 1.1332146137659975 0.9984683722224547 0.9882037060507656 1.0128615460663108 0.982590139667142 0.9857772609308302 1.0568672732052156 1.0348758648852074 0.9857100047877024 1.0 21.05103749332051 -4.259328064178162 24.947306624833093 1.0061636950418944 1.1332146586462555 0.7378395879942753 0.022911888295500657 102.58128785197825 1212016.9325626912 0.006103734076748225 0.039290859779397815 5.503917757597315e-05 4.259328064178162 0.12705096360436108 ES(ph)TLHLVLR ddPTM_KYSE-520_SHP099_60min_R1 1 ESTLHLVLR 9 0 P62979;J3QTR3;A0A2R8Y422;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;M0R2S1;F5H2Z3;F5GYU3;F5H6Q2;M0R1M6;J3QS39;P62987;P0CG47 P62979 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin 1 ES(0.698)T(0.302)LHLVLR 119.34 0.0010683 0.0 85975.0 81159.0 71503.0 83470.0 71535.0 96936.0 75768.0 83102.0 88199.0 95796.0 True False 81205.79536308661 77259.99981785743 76112.197788845 91402.96370382942 77164.39752152664 96330.98646741659 83427.36886442032 82813.73855815269 72184.2849158558 94947.32196816031 0.8552720990942557 0.8137143651483487 0.8016255352032837 0.9626702660921868 0.8127074668562321 1.0145729702594486 0.8786700576178116 0.8722072075495031 0.7602561443498335 1.0 16.534839688636797 -5.234618068122858 24.76470582577659 0.8950587623952463 0.8225550288841333 0.1751167316065021 0.0756296917288601 1237.892848773256 1142971.6644803348 0.020004929830238806 0.03463835930761501 5.826153623450167e-06 5.234618068122858 -0.07250373351111294 ES(ph)VASGDDR ddPTM_KYSE-520_SHP099_60min_R1 1 ESVASGDDR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.983)VAS(0.017)GDDR 71.34899999999999 0.025185 312800000.0 785370.0 581770.0 652720.0 649660.0 663000.0 653000.0 642350.0 626000.0 568750.0 695710.0 True False 741803.9605037203 553820.8959454274 694795.3755889247 711403.4910725992 715174.3280460213 648924.3847819492 707285.0067318701 623828.552109499 465479.33702074894 689546.5506541898 1.0757851805653333 0.8031667991377868 1.0076119950563964 1.0316975560209434 1.0371661309414395 0.9410885808453378 1.0257248130105958 0.90469389125021 0.6750513603166273 1.0 19.395288424480633 -7.5239498273219665 24.99346473609251 0.8216413072736711 0.9827811835083029 0.2637726265607826 0.10186316213543642 44.54905593003223 1039378.5483769933 0.06371526442573854 0.024513981836753126 2.9926103435163206e-08 7.5239498273219665 0.16113987623463177 ESAAPAAAPTAEAPPPSVVTRPEPQALPS(ph)PAIR ddPTM_KYSE-520_SHP099_60min_R1 2 ESAAPAAAPTAEAPPPSVVTRPEPQALPSPAIR 33 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 ESAAPAAAPTAEAPPPS(0.001)VVT(0.001)RPEPQALPS(0.999)PAIR;ESAAPAAAPTAEAPPPSVVTRPEPQALPS(1)PAIR 182.58 9.7926e-12 3112800000.0 820250.0 913360.0 771190.0 639940.0 530960.0 880320.0 644950.0 1071170.0 1030580.0 969110.0 True False 774749.0973721639 869480.8146186909 820902.1413476274 700759.7051950238 572743.5312508531 874825.5963418756 710147.8401054255 1067454.3612829577 843452.6508076373 960524.4393561705 0.806589677084604 0.9052146712700978 0.8546395153650328 0.7295594744728575 0.5962821015098346 0.9107791124276464 0.7393334422406057 1.1113245197576245 0.8781168039545092 1.0 19.873462796385283 -7.25055302646095 24.93472072590596 0.9960405007291956 0.7932180294265333 0.46005330242131237 0.10162040978870596 625.2100185146475 1432020.5282522147 0.04947872458283085 0.02820366395425783 5.6162570082884775e-08 7.25055302646095 -0.2028224713026623 ESADPLGAWLQDAR ddPTM_KYSE-520_SHP099_60min_R1 2 ESADPLGAWLQDAR 14 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 116.24 0.00099038 205040000.0 235800.0 269670.0 271840.0 191433.0 281060.0 263020.0 218704.0 203102.0 288930.0 267590.0 False True 222719.7039443535 256714.64841707784 289363.2413593782 209626.73476357 303177.8229873528 261378.39461768465 240812.73466534913 202397.48656636302 236467.5953325802 265219.36078186944 0.8397565822034013 0.9679332898634564 1.091033627810324 0.7903900158178053 1.1431210078087113 0.9855177761048003 0.9079756996451189 0.7631323971586883 0.891592509066726 1.0 18.016826569210355 -6.928196707362941 4.895879845059147 0.8642341762238797 0.9740894343788038 0.10034012785532331 0.11124868874190243 0.36821778232793406 16.537447738355564 0.04707845541264171 0.03096710241911689 1.1797861476568174e-07 6.928196707362941 0.10985525815492414 ESAFTSPISVTKPVVLASGAALSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 ESAFTSPISVTKPVVLASGAALSSPK 26 1 Q9HC44 Q9HC44 GPBP1L1 Vasculin-like protein 1 1 ESAFTSPISVTKPVVLASGAALS(0.043)S(0.957)PK;ESAFTSPISVTKPVVLASGAALS(0.031)S(0.969)PK 218.01 9.0812e-22 1881900000.0 1889780.0 2308400.0 1760120.0 1535760.0 1707250.0 2230800.0 1429950.0 1935600.0 2381000.0 2005880.0 True False 1784950.1362169671 2197500.9990209597 1873580.151491571 1681718.1686569212 1841600.862076277 2216876.7497267565 1574503.3009671334 1928885.8553724368 1948670.4201255457 1988109.4637510232 0.897812805965548 1.105321934776605 0.942392853941067 0.8458881159812878 0.9263075779548253 1.115067751623752 0.7919600654163543 0.9702110927700895 0.9801625391636803 1.0 20.922965762071016 -4.926226775691243 24.999973045789407 0.9415556866496249 1.0071404928686771 0.04899716199303117 0.09444023561971264 108.4456512753949 36745.61588086607 0.02413521937744595 0.05024146240775592 1.1851497365420564e-05 4.926226775691243 0.06558480621905227 ESAGADTRPTVRPR ddPTM_KYSE-520_SHP099_60min_R1 3 ESAGADTRPTVRPR 14 2 G3V194;E9PS48;O75489-2;O75489 G3V194 NDUFS3 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial 0 ;; 93.494 0.0014255000000000001 1271270000.0 1169880.0 1494810.0 829101.0 783378.0 1441460.0 1784650.0 1010870.0 1174380.0 1122140.0 2645050.0 False True 1104984.424302039 1422997.0838444482 882546.1770685045 857830.009588815 1554894.7012145089 1773511.337367695 1113058.604740478 1170306.3498823517 918387.6628474084 2621616.914817761 0.42148966084880896 0.5427936766052512 0.33664192967333434 0.3272140962854774 0.5931052292293421 0.6764952298497734 0.42456950840121166 0.44640631637201056 0.35031344879434806 1.0 21.322025455695947 -10.96504603914473 2.743086227754852 1.431440395068196 0.46189156659723163 0.6890984249516825 0.10925068596910681 34043538.51258323 16288605.77603401 93338441.27646129 0.028935402575557823 1.0838120140508953e-11 10.96504603914473 -0.9695488284709644 ESAS(ph)PTIPNLDLLEAHTK ddPTM_KYSE-520_SHP099_60min_R1 9 ESASPTIPNLDLLEAHTK 18 0 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 ES(0.246)AS(0.753)PT(0.001)IPNLDLLEAHTK;ES(0.026)AS(0.829)PT(0.145)IPNLDLLEAHTK;ES(0.002)AS(0.996)PT(0.002)IPNLDLLEAHTK;ES(0.01)AS(0.973)PT(0.017)IPNLDLLEAHTK;ES(0.001)AS(0.964)PT(0.035)IPNLDLLEAHTK;ES(0.024)AS(0.825)PT(0.151)IPNLDLLEAHTK;ESAS(0.99)PT(0.01)IPNLDLLEAHTK;ESAS(0.995)PT(0.005)IPNLDLLEAHTK;ES(0.001)AS(0.989)PT(0.01)IPNLDLLEAHTK 332.57 5.6243e-59 6140630000.0 9856430.0 9435760.0 8802050.0 7521030.0 7698300.0 9122630.0 8375950.0 9871580.0 11460680.0 10072570.0 True False 9309674.179593923 8982451.926235495 9369444.226777952 8235826.429919881 8304112.4126646845 9065692.282302216 9222672.76739444 9837337.793024084 9379709.412232013 9983334.86614088 0.9325214774842703 0.8997446290918335 0.9385084595884912 0.8249574456179182 0.8317974428393275 0.9080825599719281 0.9238068131595711 0.9853759214656863 0.939536691696469 1.0 23.251090388010986 -6.968908841957831 2.272153063365543 0.9722423019411891 0.8856883844793376 0.5068827758461754 0.03775718863107443 0.2839298177416077 2.9308398420375803 0.022176729290560433 0.012322834395628009 1.0742148654653163e-07 6.968908841957831 -0.08655391746185148 ESAWS(ph)PPPIEIR ddPTM_KYSE-520_SHP099_60min_R1 4 ESAWSPPPIEIR 12 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 ESAWS(1)PPPIEIR;ESAWS(1)PPPIEIR;ESAWS(1)PPPIEIR;ESAWS(1)PPPIEIR 157.33 6.279299999999999e-06 1235840000.0 3160550.0 3000110.0 2676610.0 2194540.0 2415150.0 2528680.0 2417390.0 3053270.0 3423990.0 3050920.0 True False 2985227.9910997753 2855980.212343083 2849148.5633274177 2403108.4217874887 2605208.564676242 2512897.5701537807 2661763.3726528473 3042678.919008572 2802279.7277638214 3023891.2223798437 0.9872140799927188 0.9444718749159858 0.9422126504554283 0.7947072976706515 0.8615417596357541 0.8310145390005451 0.8802444191620105 1.0062130861354008 0.9267131393563783 1.0 21.527974812138524 -7.2515232981014215 24.115843994176096 0.9748473350200327 0.8883910716559035 0.3214078871248348 0.057093910163568046 537.3307511649837 1306790.1570386742 0.029846642268296152 0.01694818071278279 5.603723549003534e-08 7.2515232981014215 -0.08645626336412926 ESDFSDTLS(ph)PSKEK ddPTM_KYSE-520_SHP099_60min_R1 1 ESDFSDTLSPSKEK 14 1 A0A590UJP6;H7C5G9;H7BZW9;H7BZK0;A0A590UJS6;A0A590UJU9;H7C3M8;A0A5F9VB99;A0A590UJK3;Q14BN4-4;Q14BN4-6;Q14BN4-2;Q14BN4-3;Q14BN4 A0A590UJP6 SLMAP Sarcolemmal membrane-associated protein 1 ESDFS(0.001)DT(0.056)LS(0.895)PS(0.048)KEK 62.203 0.02143 415090000.0 505140.0 519000.0 427560.0 541190.0 603140.0 388940.0 509620.0 545430.0 699950.0 374220.0 True False 477118.87722837477 494066.460965118 455121.2017201875 592624.5348852931 650603.6866028325 386512.48119003244 561137.3630119034 543538.0306343192 572856.7243036012 370904.70193875476 1.2863651356653831 1.3320576913222852 1.227056975393477 1.5977811329637703 1.7540993230931399 1.0420802949374712 1.5128882434727413 1.4654385015697922 1.5444849345646567 1.0 18.50068903136031 -9.4998095017396 13.98546389659052 1.0000000032250387 1.418181161132097 0.2954594530905399 0.19365575767835297 0.0 0.0 0.18999211487664056 0.046079856333580804 3.1636650610158093e-10 9.4998095017396 0.41818115790705823 ESDKEDGRES(ph)PSYDTPSQR ddPTM_KYSE-520_SHP099_60min_R1 2 ESDKEDGRESPSYDTPSQR 19 2 Q9Y6M7-7;Q9Y6M7-13;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7;Q9Y6M7-9;Q9Y6M7-2;Q9Y6M7-8;E9PFN4;Q9Y6M7-11;C9JRP1;A0A0A0MST8;Q9Y6M7-12;Q9Y6M7-10 Q9Y6M7-7 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 ESDKEDGRES(0.794)PS(0.204)YDT(0.002)PSQR;ESDKEDGRES(1)PSYDTPSQR 120.33 1.8975e-05 1931500000.0 834230.0 938880.0 809660.0 1317400.0 1189100.0 1087980.0 1038520.0 1320550.0 1649950.0 840540.0 True False 787953.598903724 893774.7955123892 861851.9791018042 1442605.2999092469 1282675.4049464925 1081189.5132543112 1143503.7365784743 1315969.320268687 1350360.671854741 833093.4695302253 0.9458165592728085 1.0728385567784868 1.0345201476465729 1.7316247848188275 1.5396536545530515 1.2978009704769204 1.3725995682372674 1.5796178560981298 1.6208993603277175 1.0 19.66811884333227 -5.233038434713083 22.19676831043447 1.467344122379351 1.0232357980323303 0.5078157781981614 0.19389971813122747 141.42244423530968 110527.38981268449 0.05135789181492624 0.08890982511748924 5.847383329813895e-06 5.233038434713083 -0.44410832434702074 ESDQTLAALLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 21 ESDQTLAALLSPK 13 0 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK;ESDQTLAALLS(1)PK 282.59 5.0931e-30 163586354000.0 97727765.0 101569231.0 75098170.0 67401407.0 73963643.0 98868241.0 74659834.0 90971654.0 112875742.0 100052049.0 True False 92306611.05998029 96689692.68423614 79939118.19952036 73807216.45630811 79784160.9085382 98251167.63460705 82207178.63048245 90656094.56521778 92380352.6186991 99165665.68517627 0.9308323644297252 0.975031953006793 0.8061168918414272 0.7442819643910397 0.8045542815376341 0.9907780778331837 0.8289883203271952 0.9141883326132854 0.9315759842926011 1.0 26.563337364260637 -6.2493255303936674 24.91619992794753 0.9212355531304698 0.8504379575225478 0.21542819348789288 0.07551942395928195 1481.2450431357056 3046679.6976509583 0.02736763962329835 0.027163154486715767 5.63215333075847e-07 6.2493255303936674 -0.07079759560792198 ESDRVYLDLT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 5 ESDRVYLDLTPVK 13 1 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 ES(0.001)DRVYLDLT(0.999)PVK;ES(0.001)DRVYLDLT(0.999)PVK;ESDRVYLDLT(1)PVK;ESDRVYLDLT(1)PVK;ESDRVYLDLT(1)PVK 123.19 0.00022515 3935020000.0 5855210.0 6443570.0 5644160.0 4134260.0 4382440.0 4456520.0 3569330.0 3840970.0 6752950.0 4353310.0 True False 5530409.829228246 6134011.225204243 6007991.584575299 4527178.827389411 4727313.09532731 4428705.205617839 3930152.709703849 3827646.5715591335 5526784.508016297 4314743.060223931 1.281747198393135 1.421639977071055 1.3924332227243885 1.0492348592257668 1.0956186798019827 1.0264122669190856 0.910865990129173 0.8871088076703417 1.2809069812211393 1.0 22.040843219857592 -5.280550349319768 6.529846179830342 1.027073547156478 1.3715845144367824 0.6654224697599402 0.10694878623062463 0.09459198658974174 18.07664844962169 0.030284253444077276 0.04700269542043151 5.2414283172413015e-06 5.280550349319768 0.3445109672803044 ESDTKNEVNGTSEDIKSEGDTQS(ph)N ddPTM_KYSE-520_SHP099_60min_R1 1 ESDTKNEVNGTSEDIKSEGDTQSN 24 2 O95232 O95232 LUC7L3 Luc7-like protein 3 1 ESDTKNEVNGTSEDIKSEGDT(0.009)QS(0.991)N 250.05 6.0219e-29 1483000000.0 1899500.0 1858700.0 1914700.0 1583500.0 1790800.0 1609800.0 1468700.0 1603600.0 2334300.0 1500800.0 True False 1794130.9484406258 1769405.2620344216 2038124.625628318 1733995.3639033649 1931725.7717418047 1599752.6410750106 1617170.5291306905 1598037.4858830525 1910449.9629143453 1487504.0796047333 1.2061351447972977 1.1895128801963328 1.3701640577482639 1.1657079719499865 1.2986356126533194 1.0754610108364238 1.087170483297372 1.074307968491549 1.2843325871227185 1.0 20.504462194462366 -6.266809471172634 24.826638628534244 1.1078309090023446 1.2453251070651825 0.40154388056755363 0.08648429069832965 439.5245357609557 2031974.5066190579 0.029112192964366797 0.026411397184866445 5.409916086919417e-07 6.266809471172634 0.1374941980628379 ESDVPLKTEEFEVTK ddPTM_KYSE-520_SHP099_60min_R1 1 ESDVPLKTEEFEVTK 15 1 M0QXF7;M0QYN0;Q969H8 M0QXF7 MYDGF Myeloid-derived growth factor 0 165.75 4.6718e-08 470330000.0 556590.0 481040.0 385540.0 324920.0 488830.0 460580.0 328950.0 405220.0 455280.0 403100.0 False True 525714.8431653425 457930.11634423945 410392.5252858101 355800.2991092398 527298.1399377628 457705.3493765236 362203.4762426229 403814.3863990595 372612.6286748246 399528.8476070546 1.3158370073001453 1.1461753490066475 1.0271912222204296 0.8905497093395799 1.3197999170672454 1.1456127689349904 0.9065765298601366 1.0107264814985772 0.9326300989441877 1.0 18.60794014979807 -4.404627585205389 2.4636828713929306 1.0351002488846008 1.3372034473803123 0.3543597151736616 0.11982368168059714 0.4777099667476736 4.421585658214889 0.03350656705926425 0.26411527675260316 3.938876959761464e-05 4.404627585205389 0.30210319849571143 ESEDKPEIEDVGS(ph)DEEEEK ddPTM_KYSE-520_SHP099_60min_R1 14 ESEDKPEIEDVGSDEEEEK 19 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK;ESEDKPEIEDVGS(1)DEEEEK 351.77 1.1747999999999998e-65 204571100000.0 42424500.0 32674080.0 28025000.0 37464750.0 35621990.0 35554470.0 40318660.0 42276190.0 36374900.0 33850690.0 True False 40071128.41385601 31104368.15200602 29831536.34158545 41025388.575812146 38425237.951602004 35332561.36446904 44394463.62500192 42129543.764226906 29770135.096608445 33550799.222038347 1.1943419931270873 0.9270827781525588 0.8891453268865844 1.2227842414217067 1.1452853238250673 1.0531063993629193 1.3232013738689345 1.255694193316071 0.8873152290528293 1.0 24.999843797848257 -5.2679433935547175 24.980006106815274 1.1433103143290335 0.9958793062904197 0.12912753464938276 0.14178560243767863 866.8329617690181 3329253.075763084 0.03961642488019875 0.060376259717448325 5.3958094753694315e-06 5.2679433935547175 -0.14743100803861386 ESEDKPEIEDVGS(ph)DEEEEKK ddPTM_KYSE-520_SHP099_60min_R1 26 ESEDKPEIEDVGSDEEEEKK 20 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK;ESEDKPEIEDVGS(1)DEEEEKK 317.15 9.4823e-54 834272710000.0 117412725.0 88920707.0 80008507.0 101907520.0 98206609.0 95705890.0 109607660.0 114679145.0 106268730.0 98935060.0 True False 110899607.08778553 84648822.76301758 85165983.37935747 111592780.06118691 105934910.40913044 95108554.04021277 120687871.9404757 114281349.81230877 86973007.44868046 98058572.33871187 1.1309526994204895 0.8632475544374171 0.8685215514374298 1.1380216680671777 1.0803227895590024 0.9699157531244773 1.23077329255415 1.1654396661778892 0.8869495585583289 1.0 26.547140421400563 -5.265700040028111 24.95843168439867 1.0775299865347567 0.9451412972515595 0.16003101880663972 0.11657373033984744 556.4412766851307 3259569.067626256 0.03252603268768447 0.050214370876723174 5.423753707063731e-06 5.265700040028111 -0.13238868928319725 ESEDKPEIEDVGS(ph)DEEEEKKDGDK ddPTM_KYSE-520_SHP099_60min_R1 13 ESEDKPEIEDVGSDEEEEKKDGDK 24 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK;ESEDKPEIEDVGS(1)DEEEEKKDGDK 292.27 2.3239999999999998e-48 306499960000.0 187193350.0 167126050.0 151591372.0 178893080.0 175063620.0 171736050.0 167135510.0 181267080.0 202357350.0 169815020.0 True False 176809361.7148081 159097063.69668463 161363194.39389098 195895024.53703406 188840130.91825676 170664181.60969666 184031198.43618706 180638306.80753475 165614356.25367132 168310591.03688633 1.0504945685566467 0.9452587785270001 0.9587227601056145 1.1638900637815621 1.1219741417037223 1.0139836154000226 1.0934023658431302 1.0732438505188704 0.9839805993989759 1.0 27.326550721005287 -5.220472257379022 24.994161678327014 1.0689178863769737 0.9808686844436031 0.2777231705895553 0.05834463122067345 618.4316061743511 377306.2244125002 0.015943989440764153 0.027615380452570743 6.019047111912957e-06 5.220472257379022 -0.08804920193337062 ESEDSETQPFDTHLEAYGPCLS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 ESEDSETQPFDTHLEAYGPCLSPPR 25 0 Q14676;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 ESEDSETQPFDTHLEAYGPCLS(1)PPR 108.23 9.238299999999999e-05 132310000.0 191620.0 199660.0 144960.0 152240.0 144450.0 172210.0 152390.0 147630.0 190790.0 182110.0 True False 180990.45661500012 190068.03390423025 154304.3535442005 166708.8438273749 155817.39319192743 171135.1735119442 167795.0683830775 147117.9059871012 156147.34542450748 180496.64707943625 1.0027358377208333 1.0530280588568588 0.8548876449560386 0.9236118594159072 0.8632702917930242 0.9481349170803594 0.9296298357787843 0.8150727914760371 0.8650983159581204 1.0 17.461612512176416 -4.757310063034375 24.998959475955704 0.895672735042993 1.0278819855003722 0.49108282496802724 0.05194160008026729 78.72852940931949 476605.8830213275 0.013074200987961325 0.03208823057004561 1.748597837528802e-05 4.757310063034375 0.1322092504573792 ESEEGNPVRGS(ph)EEDS(ph)PKKESK ddPTM_KYSE-520_SHP099_60min_R1 1 ESEEGNPVRGSEEDSPKKESK 21 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 2 ESEEGNPVRGS(1)EEDS(0.901)PKKES(0.099)K 74.748 0.025719 1004000000.0 465920.0 429900.0 428010.0 453850.0 450950.0 449160.0 410190.0 440020.0 549840.0 437370.0 True False 440074.4888115066 409246.95870694425 455600.20944021334 496983.7675450216 486437.19944548013 446356.62583255715 451656.0082686166 438493.67332143994 450002.9163384411 433495.2420687107 1.0151772063550195 0.9440633229420244 1.0509924105879782 1.1464572602304313 1.122128116387441 1.0296690309736038 1.0418938074458206 1.011530533135441 1.0380804047374386 1.0 18.725656633324416 -4.847919896661705 7.303488566628484 1.0602353397249553 0.9800968017088284 0.29305250559770535 0.0464679209183908 0.25974095943032 18.393474048802062 0.013244425914576856 0.02795632600659523 1.4193192835422444e-05 4.847919896661705 -0.08013853801612691 ESEEGNPVRGSEEDS(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 1 ESEEGNPVRGSEEDSPKK 18 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ESEEGNPVRGS(0.057)EEDS(0.943)PKK 52.541000000000004 0.054110000000000005 0.0 118780.0 132170.0 113660.0 75275.0 84714.0 120370.0 84630.0 114760.0 146920.0 123900.0 True False 112191.03661794044 125820.35480878549 120986.70546242985 82429.11336774599 91380.5098432741 119618.72618101562 93185.22630920552 114361.9243451854 120243.0315518039 122802.34239274132 0.913590363440591 1.0245761795519508 0.9852149650003843 0.671234047833751 0.744126765522312 0.9740752810598352 0.7588228733551712 0.9312682650583152 0.9791591040441855 1.0 16.90597855408759 -9.561805753235202 10.994256554163957 0.9999999998603901 0.8833977032935649 0.08017544230314377 0.11437773926501374 0.0 0.0 0.11782343845199034 0.02857638128888339 2.7428006692660636e-10 9.561805753235202 -0.11660229656682519 ESEEGNPVRGSEEDS(ph)PKKESK ddPTM_KYSE-520_SHP099_60min_R1 2 ESEEGNPVRGSEEDSPKKESK 21 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ESEEGNPVRGSEEDS(1)PKKESK;ESEEGNPVRGSEEDS(0.901)PKKES(0.099)K 179.2 1.2888e-09 1871310000.0 2103200.0 2559300.0 2656400.0 1331610.0 1617710.0 1487890.0 921810.0 1075950.0 3221000.0 1215390.0 True False 1986531.3033747457 2436347.3864123835 2827635.794390279 1458165.8140368564 1745014.5734891852 1478603.5266052263 1014995.5507986384 1072217.780578617 2636147.5948023405 1204622.5901591105 1.6490901960524897 2.022498503942702 2.347320909876674 1.2104752359361426 1.448598579957477 1.2274413070818533 0.8425838591193732 0.8900860645797743 2.1883597537832573 1.0 20.200149788317816 -5.276602764831152 24.348892758229606 1.2429726159946177 2.0079227185782678 0.4348277611934994 0.3905606811040308 505.9856128016352 812494.8648038632 0.11023385970063855 0.164269027233141 5.289288247401144e-06 5.276602764831152 0.76495010258365 ESEKQQDS(ph)QPEEVMDVLEMVENVK ddPTM_KYSE-520_SHP099_60min_R1 15 ESEKQQDSQPEEVMDVLEMVENVK 24 1 Q9H307 Q9H307 PNN Pinin 1 ESEKQQDS(1)QPEEVMDVLEMVENVK;ES(0.008)EKQQDS(0.992)QPEEVMDVLEMVENVK;ESEKQQDS(1)QPEEVMDVLEMVENVK;ES(0.002)EKQQDS(0.998)QPEEVMDVLEMVENVK;ES(0.003)EKQQDS(0.997)QPEEVMDVLEMVENVK;ESEKQQDS(1)QPEEVMDVLEMVENVK;ES(0.033)EKQQDS(0.967)QPEEVMDVLEMVENVK;ESEKQQDS(1)QPEEVMDVLEMVENVK;ES(0.001)EKQQDS(0.999)QPEEVMDVLEMVENVK;ES(0.145)EKQQDS(0.855)QPEEVMDVLEMVENVK;ESEKQQDS(1)QPEEVMDVLEMVENVK;ES(0.004)EKQQDS(0.996)QPEEVMDVLEMVENVK;ES(0.002)EKQQDS(0.998)QPEEVMDVLEMVENVK;ES(0.131)EKQQDS(0.869)QPEEVMDVLEMVENVK;ES(0.027)EKQQDS(0.973)QPEEVMDVLEMVENVK 373.3 3.4521999999999994e-86 4454642000.0 2638714.0 3320189.0 2814936.0 1793119.0 2033396.0 2410342.0 1570557.0 1876854.0 3987563.0 1960847.0 True False 2492339.2742740493 3160682.13673471 2996391.278616847 1963536.4906391143 2193412.6967593795 2395298.1615070305 1729324.2287192112 1870343.6315350183 3263522.0774830207 1943475.4210958811 1.2824135809593498 1.6263041469042474 1.5417695773725046 1.0103222656306716 1.1286032604017007 1.2324818392384798 0.889810187434264 0.9623706125804126 1.679219629977515 1.0 20.890207431522864 -5.255130791391054 24.95569362222351 1.121737051393707 1.497776631527954 0.3472298589031282 0.22234101087946403 531.271553283456 2101613.1978444424 0.059893255426662545 0.10060477308207945 5.557368672919509e-06 5.255130791391054 0.3760395801342469 ESEKS(ph)LENETLNK ddPTM_KYSE-520_SHP099_60min_R1 3 ESEKSLENETLNK 13 1 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 ESEKS(0.803)LENET(0.197)LNK;ESEKS(0.998)LENET(0.002)LNK;ESEKS(1)LENETLNK 241.66 1.0594000000000002e-15 1044870000.0 1658670.0 1425260.0 1136370.0 1221190.0 1415840.0 1427060.0 1382020.0 1491770.0 1472230.0 1418830.0 True False 1566660.2686233285 1356788.370241126 1209622.228456287 1337251.53043584 1527258.5529723666 1418153.1891989713 1521728.0688154134 1486595.3980517338 1204910.1438981213 1406260.2700330366 1.114061388214092 0.9648202392927248 0.8601695249684256 0.9509274768919017 1.0860425950428703 1.0084571251989187 1.0821098350305127 1.0571267849420292 0.8568187337538982 1.0 20.42343220181145 -4.254206950787018 23.37401349802864 0.9888828206676774 1.1140615395436078 0.1999778474188444 0.07702138426789903 634.8617504614726 2051633.8753657811 0.020366074758683617 0.19307684691727592 5.5692030102836986e-05 4.254206950787018 0.12517871887593035 ESEQES(ph)EEEILAQKK ddPTM_KYSE-520_SHP099_60min_R1 3 ESEQESEEEILAQKK 15 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 ES(0.058)EQES(0.942)EEEILAQKK;ESEQES(1)EEEILAQKK;ESEQES(1)EEEILAQKK 240.31 6.1696e-19 2147900000.0 2817010.0 2455860.0 2419860.0 2097930.0 2381970.0 2248000.0 2146750.0 2276640.0 2979590.0 2311030.0 True False 2660744.839729786 2337876.7992789885 2575848.047512895 2297316.6364343455 2569417.487444622 2233969.3981467406 2363764.4402609845 2268742.867211768 2438571.5653514797 2290556.072154135 1.1616152392320656 1.020659056418711 1.1245514042755824 1.0029514947756126 1.1217439811583543 0.9752956608679839 1.0319609587369767 0.9904768954545379 1.0646198951410715 1.0 21.127266449372215 -1.0000000000080507 0.33672592718251115 1.0130246946922432 2.2863759771502 0.35404700608730366 0.04980204538649776 66.83199060901076 0.9497004248627167 0.04114843933345938 53.322554983435154 0.09999999999814627 1.0000000000080507 1.2733512824579567 ESESALMEDRDES(ph)EVS(ph)DEGGSPISSEGQEPR ddPTM_KYSE-520_SHP099_60min_R1 2 ESESALMEDRDESEVSDEGGSPISSEGQEPR 31 1 O14976-2;O14976 O14976-2 GAK Cyclin-G-associated kinase 2 ESESALMEDRDES(1)EVS(0.991)DEGGS(0.009)PISSEGQEPR;ESESALMEDRDES(1)EVS(1)DEGGSPISSEGQEPR 201.99 5.3576e-16 644790000.0 948940.0 943050.0 862010.0 852930.0 843370.0 880090.0 776120.0 851420.0 1052670.0 822470.0 True False 896300.406535009 897744.462453092 917576.5438647657 933992.2107572452 909738.4208811062 874597.0318571896 854577.7838012595 848466.6227429213 861531.663651221 815183.5556719775 1.0995074671202913 1.1012789159038634 1.1256072788519182 1.145744666043135 1.11599211558087 1.0728835558222665 1.048325592261007 1.0408289235465598 1.0568560389335104 1.0 19.63676542340156 -6.503796647367728 2.0990970769226913 1.0383618630561469 1.1191575672424774 0.8146704885821305 0.0182899545790688 0.14449160778636716 1.2748704388031076 0.008355893724561247 0.006511767603453835 3.1347531873409e-07 6.503796647367728 0.08079570418633053 ESESEAKVDGETAS(ph)DSESR ddPTM_KYSE-520_SHP099_60min_R1 2 ESESEAKVDGETASDSESR 19 1 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 ESESEAKVDGETAS(1)DSESR;ESESEAKVDGET(0.007)AS(0.988)DS(0.006)ESR 241.29 2.5901000000000004e-26 710110000.0 936060.0 1161330.0 915210.0 1348600.0 1055290.0 1057840.0 1113530.0 1267510.0 1542960.0 929730.0 True False 884134.8858106529 1105537.9636081313 974205.900987775 1476770.538528625 1138335.3192212458 1051237.628174176 1226096.479405527 1263113.3036490572 1262797.3588563257 921493.315518995 0.959458816380777 1.1997243441592198 1.0572034377038226 1.6025841030619867 1.23531587267144 1.1407978880260325 1.3305538507514578 1.3707243258055084 1.3703814640750862 1.0 19.813614175070256 ESEVCPVPTNS(ph)PS(ph)PPPLPPPPPLPK ddPTM_KYSE-520_SHP099_60min_R1 3 ESEVCPVPTNSPSPPPLPPPPPLPK 25 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 2 ESEVCPVPT(0.004)NS(0.996)PS(1)PPPLPPPPPLPK;ESEVCPVPT(0.158)NS(0.844)PS(0.999)PPPLPPPPPLPK;ES(0.002)EVCPVPT(0.247)NS(0.816)PS(0.935)PPPLPPPPPLPK 114.03 0.00021997 809270000.0 581300.0 509490.0 493120.0 542080.0 504100.0 560150.0 573020.0 598920.0 692140.0 560640.0 True False 549054.1302071793 485013.3356399194 524907.3042198967 593599.1202177048 543769.8020633484 556653.8960729082 630946.4537362753 596842.4863089788 566464.8234295222 555673.1657713196 0.9880882576811991 0.8728392254945069 0.9446331702760606 1.0682522691081202 0.9785784802268642 1.0017649409077136 1.135463240987119 1.0740890924263236 1.019420872417373 1.0 19.0838770466608 -5.181002362863247 5.317843108558443 1.0425058264377116 0.9262476292068873 0.475071793693431 0.05020830256089762 0.1871439667459312 9.14656191303309 0.014231119178760583 0.025083657820558204 6.59170308890825e-06 5.181002362863247 -0.11625819723082431 ESGADGASTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 ESGADGASTSPR 12 0 O75528-2;O75528 O75528-2 TADA3 Transcriptional adapter 3 1 ESGADGAST(0.003)S(0.997)PR;ESGADGAST(0.018)S(0.982)PR;ESGADGASTS(1)PR 206.7 5.0869e-09 1177490000.0 1088320.0 1004810.0 998170.0 911390.0 936070.0 963520.0 965800.0 970740.0 1231130.0 1016450.0 True False 1027948.7200878678 956537.4193494415 1062513.6353284682 998008.2315806041 1009733.3834902559 957506.3142804037 1063432.4892996673 967372.7295124189 1007587.8262617222 1007445.0437861347 1.0203521536268392 0.9494685841667607 1.0546616332890746 0.9906329260700261 1.0022714288171206 0.9504303189402238 1.0555736969067049 0.9602238211196932 1.000141727309562 1.0 19.942269711085185 ESGCVLGLRPGAQES(ph)PVSWPEGSK ddPTM_KYSE-520_SHP099_60min_R1 2 ESGCVLGLRPGAQESPVSWPEGSK 24 1 Q6ZUT6-4;Q6ZUT6;Q6ZUT6-2 Q6ZUT6-4 C15orf52 Uncharacterized protein C15orf52 1 ESGCVLGLRPGAQES(0.997)PVS(0.003)WPEGSK;ESGCVLGLRPGAQES(0.997)PVS(0.003)WPEGSK 164.22 1.9397e-10 1326840000.0 1022100.0 1109360.0 990660.0 930930.0 956600.0 1009020.0 929310.0 1135940.0 1135010.0 978800.0 True False 965402.0754941637 1056064.6804166923 1054519.528712044 1019405.3073056884 1031878.977690536 1002722.3319030358 1023253.7239915852 1131999.6892703879 928920.795273705 970128.5934948779 0.9951279469212561 1.0885821606517447 1.086989431899073 1.050794002095425 1.0636517515406931 1.0335973381536352 1.0547609160815727 1.1668552982160552 0.9575233649461643 1.0 19.88781646802638 -7.812283920392665 24.999999569877488 0.9787612334859992 1.0666489330688804 0.4059313095753935 0.04295075465021457 117.46599238200382 57754.352049761015 0.03998452193307332 0.01032401162560421 1.5406928943288478e-08 7.812283920392665 0.08788769958288123 ESGS(ph)PYSVLVDTK ddPTM_KYSE-520_SHP099_60min_R1 1 ESGSPYSVLVDTK 13 0 Q9Y2D9;D6RF85 Q9Y2D9 ZNF652 Zinc finger protein 652 1 ES(0.001)GS(0.999)PYSVLVDTK 175.29 4.093e-07 185890000.0 96648.0 102750.0 92649.0 82295.0 82072.0 86613.0 91950.0 96905.0 125230.0 86050.0 True False 91286.74277698853 97813.7357691056 98621.30278364122 90116.29205710601 88530.59947419788 86072.41613953904 101245.20334552103 96568.85917279708 102491.38879139925 85287.66394588695 1.0703393498373674 1.1468685064602795 1.1563372499710411 1.0566157857751002 1.0380235004486522 1.00920123916338 1.1871025499040375 1.1322722971292518 1.2017141055291147 1.0 16.38004946398719 -6.779827224993073 24.998170062806484 1.1412949040843043 1.0831818784883382 0.11397362442947911 0.06601915971172127 501.80115376163656 682189.3752658429 0.02806685127999102 0.018962873455585873 1.660247270842444e-07 6.779827224993073 -0.058113025595966095 ESGVAGDPWKEET(ph)DT(ph)DLEVVLEK ddPTM_KYSE-520_SHP099_60min_R1 2 ESGVAGDPWKEETDTDLEVVLEK 23 1 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 2 ESGVAGDPWKEET(1)DT(1)DLEVVLEK;ESGVAGDPWKEET(1)DT(1)DLEVVLEK 153.01 2.4593000000000003e-07 267520000.0 608520.0 534290.0 497610.0 548010.0 563900.0 551710.0 544450.0 681520.0 754790.0 653400.0 True False 574764.182545454 508621.90641435946 529686.7368041506 600092.7056347855 608275.7218478908 548266.5732435663 599488.319319946 679155.9661879645 617739.162707501 647611.3843375071 0.8875140191264947 0.7853813547991734 0.8179083160281518 0.9266247013996948 0.9392603906587346 0.8465981088402755 0.9256914467821007 1.0487091218798243 0.9538732296058001 1.0 19.30476882138505 -6.433586530234912 0.5266442703218246 1.0120220291544622 0.8236298922849238 0.5624397689957819 0.05084408664754881 0.7218673973809666 0.42841938964733967 0.0487715100798933 0.05293052793106014 3.684796174692608e-07 6.433586530234912 -0.18839213686953837 ESGVAGDPWKEET(ph)DTDLEVVLEK ddPTM_KYSE-520_SHP099_60min_R1 2 ESGVAGDPWKEETDTDLEVVLEK 23 1 Q1ED39 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 ESGVAGDPWKEET(0.71)DT(0.29)DLEVVLEK;ESGVAGDPWKEET(0.995)DT(0.005)DLEVVLEK 145.67 1.8661000000000002e-06 502710000.0 422970.0 440150.0 388870.0 385990.0 408120.0 388810.0 376140.0 452720.0 479230.0 413960.0 True False 399507.0109302087 419004.53332138085 413937.18241399946 422674.37354787515 440236.7221148452 386383.2925682535 414163.9019726405 451149.619985642 392213.9124051929 410292.6364560067 0.9737123590153575 1.0212333736735446 1.0088827964095903 1.030177819418887 1.0729822643601092 0.9417261199365522 1.0094353765402 1.099580104294697 0.9559370009489502 1.0 18.64629373677418 -4.258902982922318 23.288152333992056 1.01820778360567 0.9737123223674587 0.07029039461882314 0.044717629193209596 247.3932807884898 2271090.64633675 0.01079369508720918 0.07028330230118966 5.509307551235624e-05 4.258902982922318 -0.04449546123821124 ESGVVAVS(ph)PEKS(ph)ESPQKEDGLSSQLK ddPTM_KYSE-520_SHP099_60min_R1 1 ESGVVAVSPEKSESPQKEDGLSSQLK 26 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 2 ES(0.001)GVVAVS(0.952)PEKS(0.593)ES(0.452)PQKEDGLS(0.001)SQLK 51.236000000000004 0.06389600000000001 1519300000.0 318500.0 296250.0 256870.0 259920.0 258150.0 287500.0 237920.0 280600.0 374250.0 272110.0 True False 300832.1700859909 282017.70531968435 273428.25120653125 284622.71865220217 278464.936327422 285705.60585728986 261971.27547543682 279626.66409253236 306295.6340747519 269699.3170983763 1.1154354164577234 1.0456745250742137 1.0138262645537022 1.0553334792033693 1.0325014513323678 1.059348644005187 0.9713457130478363 1.0368089437561867 1.1356930279620496 1.0 18.04099234298833 -4.270698851004049 4.479256791483733 1.0377427340933871 1.120101592704627 0.23997257502730585 0.04100133142506602 0.27038709746967293 13.721157057066321 0.010131836007054968 0.0694707612460422 5.361683191126966e-05 4.270698851004049 0.08235885861123982 ESGVVAVS(ph)PEKSES(ph)PQKEDGLSSQLK ddPTM_KYSE-520_SHP099_60min_R1 7 ESGVVAVSPEKSESPQKEDGLSSQLK 26 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 2 ESGVVAVS(1)PEKS(0.027)ES(0.973)PQKEDGLSSQLK;ESGVVAVS(0.999)PEKS(0.143)ES(0.772)PQKEDGLS(0.041)S(0.045)QLK;ESGVVAVS(1)PEKS(0.047)ES(0.953)PQKEDGLSSQLK;ESGVVAVS(1)PEKS(0.056)ES(0.944)PQKEDGLSSQLK;ESGVVAVS(1)PEKS(0.268)ES(0.732)PQKEDGLSSQLK;ES(0.001)GVVAVS(0.999)PEKS(0.215)ES(0.785)PQKEDGLSSQLK;ESGVVAVS(1)PEKS(0.001)ES(0.999)PQKEDGLSSQLK 209.47 1.7268e-21 19429170000.0 11282370.0 10331610.0 9389150.0 9909980.0 9909730.0 9442250.0 9582380.0 10289760.0 12841750.0 9940000.0 True False 10656514.445253 9835263.947537217 9994389.632171161 10851821.519655868 10689569.372349184 9383317.415325204 10551060.48541658 10254067.224208029 10510011.91417355 9851939.333202967 1.0816666734171267 0.9983074006952569 1.0144591124803326 1.101490899673235 1.0850218429911804 0.952433535974139 1.0709627950973508 1.0408171302527018 1.0667962477958781 1.0 23.231976313283997 ESGVVAVS(ph)PEKSESPQKEDGLSSQLK ddPTM_KYSE-520_SHP099_60min_R1 4 ESGVVAVSPEKSESPQKEDGLSSQLK 26 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 ESGVVAVS(0.999)PEKS(0.001)ESPQKEDGLSSQLK;ESGVVAVS(1)PEKSESPQKEDGLSSQLK;ESGVVAVS(1)PEKSESPQKEDGLSSQLK;ESGVVAVS(0.962)PEKS(0.038)ESPQKEDGLSSQLK 193.97 1.4263e-15 4170190000.0 2197730.0 2146750.0 1927221.0 1550819.0 1633879.0 1916940.0 1647850.0 1852180.0 2576220.0 2210730.0 True False 2075817.5358338617 2043616.9076625563 2051452.7493226263 1698208.3714892648 1762455.9818001594 1904975.6664072094 1814430.7594661983 1845755.2198820617 2108443.389221262 2191144.6521219146 0.9473667262559002 0.9326709241598944 0.9362470649009822 0.7750325245960882 0.8043540074332332 0.8693974925673766 0.8280743846414226 0.8423703191364494 0.9622565936846916 1.0 21.06325329875058 -10.112374003280356 10.610402236716062 0.9999999993995571 0.8729840242534531 0.25774621809381937 0.061918195804570725 9.486809789949655e-11 0.0 0.06438032996736145 0.015614523452342105 7.720154588093424e-11 10.112374003280356 -0.12701597514610397 ESHPHGVKR ddPTM_KYSE-520_SHP099_60min_R1 1 ESHPHGVKR 9 1 E9PM92;O00193;E9PQA1;E9PRZ9 E9PM92 C11orf58;SMAP Small acidic protein 0 74.684 0.03551 69935000.0 125040.0 180610.0 68402.0 59930.0 183580.0 156180.0 70686.0 84928.0 109590.0 76612.0 False True 118103.78193893978 171933.22449886292 72811.3023670697 65625.7291813885 198026.70157268282 155205.2226879705 77831.63070888 84633.40459034419 89691.21853908361 75933.27728323414 1.5553626310426187 2.2642671388664706 0.9588852868220168 0.8642551925765289 2.607904052844122 2.0439684449421147 1.0250002830585716 1.1145759490224323 1.1811846103327241 1.0 16.21244465583767 -6.777796532755946 24.967910756936384 1.0897379790844133 1.7081472753028568 0.2753440557565866 0.5049476837164032 374.7679838794783 572048.5724705094 0.22697925029311056 0.15351857221789944 1.6680285019453014e-07 6.777796532755946 0.6184092962184435 ESIESEIRR ddPTM_KYSE-520_SHP099_60min_R1 1 ESIESEIRR 9 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 126.24 0.0015897 753920000.0 1605400.0 1534300.0 1189600.0 849040.0 1574000.0 1792600.0 1136100.0 1201700.0 1319600.0 1463100.0 False True 1516345.261714441 1460589.9249687498 1266283.5194272986 929732.5063268167 1697864.8451650646 1781411.7184687909 1250948.0752674998 1197531.5831788871 1079993.9044089315 1450138.0722745745 1.0456557832014017 1.0072074879585646 0.8732158293321022 0.6411337817429413 1.1708297834715318 1.2284428307399764 0.8626406679367843 0.8258052154306463 0.7447524653393428 1.0 20.46775883970401 -6.970426982082661 24.995966981517295 0.8400114964123179 0.9867886272703659 0.1411547310567609 0.16229560946829225 421.5453910985927 356301.60660179757 0.07350120188147688 0.049553767355835235 1.070466345254787e-07 6.970426982082661 0.146777130858048 ESKEEETS(ph)IDVAGKPNEVTK ddPTM_KYSE-520_SHP099_60min_R1 2 ESKEEETSIDVAGKPNEVTK 20 2 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 ESKEEET(0.164)S(0.836)IDVAGKPNEVTK;ESKEEET(0.043)S(0.957)IDVAGKPNEVTK 162.47 5.3764e-09 2737250000.0 925270.0 1053130.0 770150.0 1242010.0 1257380.0 1049490.0 1057360.0 1505830.0 1952050.0 1027070.0 True False 873943.4286199828 1002536.054019643 819795.1012835695 1360050.256976077 1356328.6524864356 1042939.7436214518 1164248.267639155 1500606.6271933652 1597606.9271760036 1017970.9588483698 0.8585150892798304 0.9848375784254314 0.8053226805320688 1.3360403311649496 1.3323844267825182 1.0245279932163578 1.1436949723558605 1.4741153607083262 1.569403246025187 1.0 19.957264973445966 -5.263928413269862 24.99858164217475 1.2756342467491617 0.8930863527189377 0.5043970149351713 0.17501913338077263 189.72354195712137 1905492.499883806 0.05140339627810462 0.0804246270081002 5.4459241308305445e-06 5.263928413269862 -0.38254789403022404 ESKEEYARSTR ddPTM_KYSE-520_SHP099_60min_R1 1 ESKEEYARSTR 11 2 Q8TF61 Q8TF61 FBXO41 F-box only protein 41 0 45.879 0.065401 5721500.0 26144.0 4995.9 6934.5 2340.4 11268.0 3301.7 4397.6 1769.1 19453.0 4493.8 False True 24693.740203228088 4755.889465001214 7381.508965592299 2562.8309123330814 12154.727493850038 3281.0928655965718 4842.152324440066 1762.9634050110442 15920.825570223524 4453.988428123495 5.544185981109919 1.0677821780971515 1.6572806788144696 0.5754013405492444 2.7289535413029644 0.7366639852225492 1.0871497316574994 0.39581679060486386 3.5745098639448214 1.0 12.12088209453666 -4.258675200116138 24.863586494552347 1.395373086050342 5.54418759708099 0.6275413760484718 0.9518230767751483 146.38955167743566 1316685.4593894277 0.22176333555199176 1.490892407767021 5.512197881970827e-05 4.258675200116138 4.148814511030648 ESKGS(ph)PVFLPR ddPTM_KYSE-520_SHP099_60min_R1 6 ESKGSPVFLPR 11 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 ES(0.001)KGS(0.999)PVFLPR;ES(0.061)KGS(0.939)PVFLPR;ES(0.018)KGS(0.982)PVFLPR;ES(0.039)KGS(0.961)PVFLPR;ES(0.284)KGS(0.716)PVFLPR;ES(0.159)KGS(0.841)PVFLPR 142.54 5.6574e-05 17441110000.0 10467020.0 10392950.0 10005040.0 8673760.0 9837210.0 8898430.0 7976870.0 9440590.0 12182590.0 9457770.0 True False 9886393.53511294 9893657.081864012 10649980.88703001 9498111.542538969 10611342.460931536 8842891.597664982 8783249.866348958 9407842.796740267 9970538.75410216 9373981.515833717 1.0546632205764115 1.0554380830762793 1.1361213875919196 1.0132419747676675 1.1319995076806773 0.9433442537440826 0.9369817778617393 1.003612262393451 1.0636396857899484 1.0 23.16023051935326 -6.26619546919847 24.99496405655377 0.9864579991450293 1.0766218870326694 0.46836593663473614 0.04721883660350622 376.91254085227484 1980801.297862783 0.016580483804275233 0.01506958174418169 5.417569991121302e-07 6.26619546919847 0.09016388788764007 ESLCDS(ph)PHQNLSR ddPTM_KYSE-520_SHP099_60min_R1 1 ESLCDSPHQNLSR 13 0 O15042-2;O15042;E7ET15;C9J5L1;E7EW00;U3KPT1;C9JDJ7;H0Y8D9 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 ESLCDS(1)PHQNLSR 238.64 8.1373e-16 682380000.0 549620.0 425880.0 434300.0 611430.0 490980.0 537520.0 442080.0 452790.0 507640.0 477720.0 True False 519131.482959693 405420.08554108784 462295.67290456954 669540.123366868 529617.3327059359 534165.1382970796 486769.76068502374 451219.3771719803 415465.37256301154 473487.7724605355 1.096398921268789 0.8562419329949623 0.9763624317101054 1.4140600081128245 1.1185448991717706 1.1281498052657768 1.0280513859005624 0.9529694395848178 0.8774574481701952 1.0 18.85296764387213 -7.106964689350608 2.794420127847737 0.93431321946614 1.096576087842522 0.20724438844838944 0.13513745117312573 0.49538370287152456 7.431251334166052 0.08185706540817958 0.04274084351273231 7.816913580262713e-08 7.106964689350608 0.16226286837638193 ESLCDS(ph)PHQNLSRPLLENK ddPTM_KYSE-520_SHP099_60min_R1 4 ESLCDSPHQNLSRPLLENK 19 1 O15042-2;O15042;E7ET15;C9J5L1;E7EW00;U3KPT1;C9JDJ7;H0Y8D9 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 ESLCDS(1)PHQNLSRPLLENK;ESLCDS(1)PHQNLSRPLLENK;ESLCDS(1)PHQNLSRPLLENK;ESLCDS(1)PHQNLSRPLLENK 219.18 6.5181e-19 7051700000.0 2809340.0 2973720.0 2787620.0 3381820.0 2468980.0 2391320.0 2248130.0 2074180.0 3345970.0 2374190.0 True False 2653500.309919556 2830858.0275552827 2967314.445549697 3703227.156018739 2663274.6794254445 2376394.8848648854 2475392.9200344374 2066985.1536972523 2738426.193039671 2353156.5236918707 1.127634427716043 1.2030045596431236 1.2609932300186615 1.5737275097232974 1.1317881545962905 1.0098753996765826 1.0519457142403728 0.8783882979676831 1.1637246249745214 1.0 21.166165856075775 -5.993584811303536 24.99945769694916 1.0213221789133635 1.2915995594008076 0.5081830623598871 0.12549843907123975 139.85977392494308 545016.8331740408 0.04011479066311551 0.04537168484567735 1.0148811559061225e-06 5.993584811303536 0.2702773804874441 ESLIDGIKR ddPTM_KYSE-520_SHP099_60min_R1 2 ESLIDGIKR 9 1 P23526;P23526-2 P23526 AHCY Adenosylhomocysteinase 0 ; 98.009 0.0069514 1656230000.0 2914500.0 2562100.0 1923600.0 1454770.0 2521200.0 2404200.0 1684520.0 1835480.0 2081900.0 1958900.0 False True 2752826.875088288 2439012.870209494 2047598.333868821 1593030.9034074517 2719604.096334286 2389194.4960072935 1854807.720930909 1829113.1482842518 1703879.4404281245 1941545.67000114 1.4178532689816519 1.2562222500839044 1.0546228015679995 0.8204962304113692 1.4007417586693642 1.2305631193346538 0.9553253109569243 0.9420912299648238 0.8775891634973099 1.0 20.888774212758683 -1.0000000000000002 0.596835964988086 1.022024819851319 26.17352379832531 0.36282059342603834 0.16324727585054943 208.9345370270821 1.6387533756861015 0.08088377571719337 6845.544686555651 0.09999999999999995 1.0000000000000002 25.15149897847399 ESLKEEDES(ph)DDDNM ddPTM_KYSE-520_SHP099_60min_R1 25 ESLKEEDESDDDNM 14 1 P25788-2;P25788;G3V4X5;H0YJ03 P25788-2 PSMA3 Proteasome subunit alpha type-3 1 ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ES(0.002)LKEEDES(0.998)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM;ESLKEEDES(1)DDDNM 207.05 4.6549e-11 135779470000.0 55119700.0 49189900.0 48767100.0 45085440.0 46000470.0 43691920.0 45372230.0 45391690.0 56544580.0 42050650.0 True False 52062100.36260218 46826743.36845478 51910705.29611885 49370346.66216817 49620445.2821285 43419222.52058515 49958897.7986923 45234236.82189006 46277509.64486453 41678113.95591066 1.2491472243124115 1.1235331670235993 1.245514740686989 1.1845628790783278 1.1905635973503903 1.0417751284646979 1.1986842267272817 1.0853235074346517 1.110355178111451 1.0 25.312786657566452 -8.119317854075216 0.12956340674306113 0.8681121578594022 1.3148868965665514 0.5681497962277309 0.05270911632289222 7.3635430584476955 0.6128087036312728 1.125297199400272 0.7707348111397774 7.59770008328031e-09 8.119317854075216 0.44677473870714923 ESLPPAAEPS(ph)PVSK ddPTM_KYSE-520_SHP099_60min_R1 2 ESLPPAAEPSPVSK 14 0 Q9NWT1 Q9NWT1 PAK1IP1 p21-activated protein kinase-interacting protein 1 1 ESLPPAAEPS(1)PVSK;ESLPPAAEPS(1)PVSK 251.05 6.9975e-19 1671170000.0 1205770.0 1509260.0 964330.0 829470.0 809290.0 1278470.0 898200.0 1309290.0 1358790.0 1303460.0 True False 1138883.5344570957 1436752.8841545556 1026492.2547825542 908302.5794107515 872976.5187697809 1270490.5945056314 988998.8215872452 1304748.378580583 1112067.9883084367 1291912.3584765359 0.8815486027241842 1.112113275120938 0.7945525468871794 0.7030682642295107 0.6757242571773386 0.9834185625438511 0.76553089309673 1.009935674057011 0.8607921280510256 1.0 20.301076772266278 -9.422923190242601 11.796201208326055 0.9999999411317418 0.8648351782118878 0.08624427012215652 0.13163995562924424 0.0 0.0 0.13352933028031166 0.032385619580218336 3.776389746271172e-10 9.422923190242601 -0.13516476291985402 ESLPVSGEESQLTPEKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 ESLPVSGEESQLTPEKSPK 19 1 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 ESLPVSGEESQLTPEKS(1)PK;ESLPVSGEESQLT(0.001)PEKS(0.999)PK 193.87 4.3391e-13 1221390000.0 579030.0 549380.0 456750.0 447120.0 486570.0 544360.0 566730.0 747280.0 838710.0 732230.0 True False 546910.0516323126 522986.96016380814 486192.83582583914 489614.1503684701 524860.2907954042 540962.447319911 624020.5991517915 744687.8600964631 686421.4061585444 725743.0118663206 0.7535863834580767 0.7206227984460987 0.6699242402287081 0.6746384634271275 0.7232040573779327 0.7453911900974038 0.8598368691791606 1.0261040725441144 0.9458188297167935 1.0 19.46909924973609 -6.920187571750649 2.0919079505141576 0.9919132451907614 0.7063736275056812 0.9410333183311944 0.031146503796754866 0.07102184435579305 0.6255113912701559 0.017455985974361456 0.009883518527287968 1.201745288825579e-07 6.920187571750649 -0.2855396176850802 ESLS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 6 ESLSPGK 7 0 Q0ZGT2-4;Q0ZGT2-2;Q0ZGT2;E7ETM8;E7EUA0;H7BXY5 Q0ZGT2-4 NEXN Nexilin 1 ES(0.008)LS(0.992)PGK;ESLS(1)PGK;ESLS(1)PGK;ESLS(1)PGK;ESLS(1)PGK;ESLS(1)PGK 146.27 0.001472 4976000000.0 15246000.0 12891210.0 11924420.0 12813730.0 13141900.0 13761900.0 13922900.0 13889700.0 14958700.0 13540700.0 True False 14400273.987852503 12271896.921499299 12693087.192946596 14031543.046611585 14176092.762817528 13676006.877382405 15330362.606409542 13841519.872580344 12242577.158140266 13420739.932505194 1.072986590923714 0.9143979380582896 0.9457814738071025 1.0455118806547334 1.0562825026124574 1.019020333167991 1.1422889262073561 1.0313529613263734 0.9122132773386508 1.0 23.677960878784496 -3.920431389892171 20.722542238186147 1.0125932409488918 3.764745393542364 0.07530855324676944 0.06674387686801057 1891.2578929732424 497096.7897408518 0.017152337599658368 2240.867348944671 0.00012010708039274516 3.920431389892171 2.7521521525934722 ESLS(ph)PGKLK ddPTM_KYSE-520_SHP099_60min_R1 2 ESLSPGKLK 9 1 Q0ZGT2-4;Q0ZGT2-2;Q0ZGT2;E7ETM8;E7EUA0;H7BXY5 Q0ZGT2-4 NEXN Nexilin 1 ES(0.002)LS(0.998)PGKLK;ESLS(1)PGKLK 150.09 0.00043168 2506100000.0 2487160.0 2601900.0 2417570.0 1633180.0 1923750.0 2014700.0 1569900.0 1693500.0 2825680.0 1929990.0 True False 2349192.2767694616 2476900.818468476 2573410.4304487663 1788396.9361665288 2075138.180359782 2002125.5099849815 1728600.8127475125 1687625.6437658693 2312607.741596112 1912891.790109499 1.2280842486312242 1.2948462800013858 1.345298486696656 0.9349179840769541 1.0848173383822175 1.0466485978646887 0.9036584409453516 0.8822379041468233 1.2089589978655992 1.0 20.86732383386659 -5.259741847414568 24.997523057014387 1.0042116666407097 1.28995334390481 0.6552858987563451 0.09324289294451074 90.24807364691392 1328964.6244464247 0.025785314225370327 0.04183017266726378 5.498676281115917e-06 5.259741847414568 0.2857416772641004 ESLTEAEVATEKEGEDGDQPT(ph)TPPKPLK ddPTM_KYSE-520_SHP099_60min_R1 1 ESLTEAEVATEKEGEDGDQPTTPPKPLK 28 2 M0R0Q7;P18858-2;P18858-3;P18858;B4E135 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 ESLTEAEVATEKEGEDGDQPT(0.5)T(0.5)PPKPLK 62.781000000000006 0.027058 1914700000.0 598300.0 704880.0 525490.0 475000.0 480540.0 661120.0 458310.0 566600.0 703760.0 638600.0 True False 565111.1063185191 671016.50675355 559363.926213728 520143.8571860426 518355.7641014111 656993.7048499885 504640.4474745606 564634.5968454342 575974.9243458845 632942.5008232814 0.8928316641455858 1.0601539727238178 0.883751565878657 0.8217869024587238 0.8189618542398007 1.037999034660215 0.7972927190355591 0.8920788161815684 0.9099956529964444 1.0 19.27171491951708 -4.812202952552099 24.991388936971813 0.8876327036415723 0.9764932931423139 0.1310601237801119 0.08184279790137798 158.41249353023207 77987.28202321187 0.020610862530271723 0.042905044428421114 1.5409801607140693e-05 4.812202952552099 0.0888605895007416 ESLTEAEVATEKEGEDGDQPTT(ph)PPKPLK ddPTM_KYSE-520_SHP099_60min_R1 6 ESLTEAEVATEKEGEDGDQPTTPPKPLK 28 2 M0R0Q7;P18858-2;P18858-3;P18858;B4E135 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 ESLTEAEVATEKEGEDGDQPT(0.117)T(0.883)PPKPLK;ESLTEAEVATEKEGEDGDQPT(0.035)T(0.965)PPKPLK;ESLTEAEVATEKEGEDGDQPT(0.452)T(0.548)PPKPLK;ESLTEAEVATEKEGEDGDQPT(0.215)T(0.785)PPKPLK;ESLTEAEVATEKEGEDGDQPT(0.159)T(0.841)PPKPLK;ESLTEAEVATEKEGEDGDQPT(0.142)T(0.858)PPKPLK 158.2 3.8482e-08 25769500000.0 17045000.0 19596000.0 14548620.0 12686820.0 13546790.0 18128000.0 13950370.0 17521100.0 20535100.0 19365400.0 True False 16099479.871634884 18654578.74580431 15486447.323815035 13892571.558368493 14612845.302308561 18014856.427759822 15360609.542090911 17460323.3935555 16806443.48774465 19193837.622053213 0.8387837903315909 0.9719045827693514 0.8068447607382858 0.7238037453440939 0.7613300471771621 0.9385750146735236 0.8002886053616488 0.9096838129699528 0.8756166337697101 1.0 24.194139857494775 -8.21175924546477 0.7723171544686207 0.99937321212769 0.8332216650910357 0.3163373619427371 0.07211214865664838 1.2361733632226664 1.5453152055858483 0.07639013597359678 0.02772751298218562 6.141023432479107e-09 8.21175924546477 -0.16615154703665436 ESLWPFLIDKR ddPTM_KYSE-520_SHP099_60min_R1 2 ESLWPFLIDKR 11 1 Q9NZL9;Q9NZL9-2;Q9NZL9-4 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta 0 ; 135.6 0.00027804 244830000.0 225910.0 185856.0 161853.0 144233.0 246890.0 187274.0 144803.0 138895.0 165156.0 126813.0 False True 213378.3219595802 176927.19878445653 172286.30335395646 157940.8609547674 266318.83838805783 186105.15350023686 159441.1003810928 138413.20566333662 135167.83364395384 125689.535479021 1.6976617913843388 1.407652579112186 1.3707290960806597 1.256595152116936 2.1188624603717265 1.480673413191983 1.2685312247629823 1.1012309428611051 1.075410400148347 1.0 16.93950501487961 -6.941626734226318 2.5544816102097445 1.0694782776343918 1.5533357052061874 0.5084701388948152 0.22173822881518723 0.26605450650345425 3.498641354008401 0.11973017376667751 0.07013426482233003 1.1438610337678116e-07 6.941626734226318 0.4838574275717955 ESMEAS(ph)PEAMVK ddPTM_KYSE-520_SHP099_60min_R1 1 ESMEASPEAMVK 12 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 ES(0.015)MEAS(0.985)PEAMVK 116.01 0.0013109000000000003 139620000.0 704570.0 829870.0 643380.0 561520.0 657150.0 688200.0 674070.0 704350.0 841990.0 780100.0 True False 665486.0975745266 790001.7995397347 684853.3042443971 614886.6919728555 708863.9663279696 683904.6885251725 742211.5738892371 701906.7742465264 689105.8408406151 773188.9209086155 0.8607030954252144 1.0217448519714452 0.8857515747116365 0.7952606088176605 0.9168056436904783 0.8845246873448209 0.9599356041173285 0.9078075943220687 0.8912515715186531 1.0 19.560461439631183 -6.744402571121752 24.916812898261483 0.9320660014111027 0.8960879100575381 0.11761687393379838 0.059601764706902934 688.6419774484881 1007157.8966626805 0.02361092045994773 0.018241814273605956 1.80134720025393e-07 6.744402571121752 -0.03597809135356467 ESNRLS(ph)APSYLAR ddPTM_KYSE-520_SHP099_60min_R1 9 ESNRLSAPSYLAR 13 1 Q9H4B6;H0YJH0 Q9H4B6 SAV1 Protein salvador homolog 1 1 ES(0.025)NRLS(0.929)APS(0.043)Y(0.003)LAR;ES(0.018)NRLS(0.935)APS(0.046)Y(0.001)LAR;ES(0.033)NRLS(0.896)APS(0.071)YLAR;ESNRLS(1)APSYLAR;ES(0.008)NRLS(0.948)APS(0.043)YLAR;ESNRLS(1)APSYLAR;ESNRLS(1)APSYLAR;ESNRLS(1)APSYLAR;ES(0.001)NRLS(0.999)APS(0.001)YLAR 166.6 5.3888e-07 17841810000.0 8967170.0 8870430.0 8960380.0 9582150.0 9201880.0 8593730.0 9161540.0 9259550.0 11203200.0 10164420.0 True False 8469743.204489792 8444281.228013128 9537980.431914909 10492834.655021561 9926015.604464754 8540093.34338771 10087677.871213984 9227430.78224522 9168981.289689407 10074371.146599088 0.8407217762022806 0.8381943751262086 0.9467569035447683 1.041537432196325 0.9852739649973671 0.8477048561260004 1.0013208491548764 0.9159311929221728 0.9101293923228823 1.0 23.26418645115357 -4.773752563612948 6.357484353886666 0.9552473843211953 0.8386029130497242 0.44076596023112224 0.05258792681285784 0.13072939158987096 21.086344991184944 0.014154689742654419 0.0326365397957004 1.6836330265600678e-05 4.773752563612948 -0.11664447127147104 ESNYFGLS(ph)PEER ddPTM_KYSE-520_SHP099_60min_R1 7 ESNYFGLSPEER 12 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 ESNYFGLS(1)PEER;ESNYFGLS(1)PEER;ESNYFGLS(1)PEER;ESNYFGLS(1)PEER;ESNYFGLS(1)PEER;ESNYFGLS(1)PEER;ESNYFGLS(1)PEER 229.23 1.8281e-11 2389960000.0 3087980.0 2855420.0 2728140.0 2620970.0 2783030.0 2638630.0 2467860.0 2578230.0 3270040.0 2695030.0 True False 2916683.593664485 2718241.3371272 2904000.269578333 2870066.2007766324 3002038.627725373 2622161.3314198963 2717335.3727925834 2569286.7218934083 2676283.1670001415 2671154.130901615 1.0919188675495841 1.0176280378885103 1.087170611378432 1.0744667136852477 1.1238732325461398 0.9816585651442054 1.0172888720110584 0.961863897021239 1.0019201572979972 1.0 21.34903179406989 -6.278376093091621 24.99434121606824 0.991709196695755 1.0758020979171745 0.7021563946429998 0.028115675501997762 479.61028639155995 707781.914291302 0.009898879364462812 0.008752179684861786 5.26773485197756e-07 6.278376093091621 0.08409290122141955 ESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGR ddPTM_KYSE-520_SHP099_60min_R1 15 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGR 40 1 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ES(0.108)PRPLQLPGAEGPAIS(0.892)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR;ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGR 393.87 3.817299999999999e-115 51548600000.0 11890856.0 13427663.0 10677452.0 8990106.0 9324184.0 12310537.0 9121136.0 12695322.0 14422971.0 13481264.0 True False 11231246.513846237 12782577.914146926 11365737.640447233 9844522.971266082 10057944.233450184 12233702.37222116 10043189.440588951 12651284.891092418 11804123.039911175 13361830.489224691 0.8405469986244318 0.9566487110022173 0.8506123206407119 0.736764545786219 0.7527370027303637 0.9155708405436456 0.7516327533632481 0.9468227352004447 0.8834211038248323 1.0 23.67161432597779 -7.891443646669315 1.1724307183440834 0.9934723991131277 0.8328984422642471 0.3226503928492519 0.07310341598477893 0.5748713777915955 1.749468411774569 0.07192737880722007 0.023076406158338073 1.283974366044941e-08 7.891443646669315 -0.16057395684888054 ESPRPLQLPGAEGPAIS(ph)DGEEGGGEPGAGGGAAGAAGAGRR ddPTM_KYSE-520_SHP099_60min_R1 1 ESPRPLQLPGAEGPAISDGEEGGGEPGAGGGAAGAAGAGRR 41 2 Q6PKG0;A0A0B4J210 Q6PKG0 LARP1 La-related protein 1 1 ESPRPLQLPGAEGPAIS(1)DGEEGGGEPGAGGGAAGAAGAGRR 101.83 0.00017118 373800000.0 100000.0 110620.0 103210.0 88787.0 102010.0 67135.0 51969.0 97378.0 148410.0 87848.0 True False 94452.80065494226 105305.64915599488 109863.08174183876 97225.28978521502 110037.60664249588 66715.98556253617 57222.533688563206 97040.21844619614 121462.4851116473 87069.73506470972 1.0847948553506621 1.209440330531985 1.2617826580061275 1.1166370233348908 1.2637870846938557 0.7662362302234322 0.6572034892036338 1.1145114703068342 1.3950023509475145 1.0 16.409883713072873 -6.236611042891858 24.896552699281962 0.9731609324033298 1.188732554504313 0.21299936032022837 0.19201473956440707 1230.3318841277508 1233712.9710079965 0.06866984494373686 0.06864173079745486 5.799478691827591e-07 6.236611042891858 0.21557162210098324 ESPS(ph)PAPKPR ddPTM_KYSE-520_SHP099_60min_R1 1 ESPSPAPKPR 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 ES(0.292)PS(0.708)PAPKPR 79.65899999999999 0.017709 741010000.0 1099900.0 956810.0 916170.0 840570.0 926510.0 997970.0 826070.0 845740.0 1215000.0 965430.0 True False 1038886.3544037098 910843.4113989094 975227.7841238283 920457.5200734148 999421.0658792168 991741.2990518251 909577.2172662816 842806.3253372004 994386.6276575108 956877.0412931751 1.0857051737804293 0.9518918022820849 1.0191777438884446 0.9619391837737679 1.0444613286243605 1.0364354627126726 0.950568545397463 0.8807885328695803 1.0392000066316183 1.0 19.867974024734828 -6.772396187048455 24.987938131300925 0.9577049684793412 1.0125591888364074 0.15998423898337277 0.052556884168483094 352.29142553703895 803423.3656850945 0.021082409540750538 0.014359078760695695 1.6888995226647321e-07 6.772396187048455 0.05485422035706622 ESQLAHIKDEPPPLS(ph)PAPLTPATPSSLDPFFSR ddPTM_KYSE-520_SHP099_60min_R1 4 ESQLAHIKDEPPPLSPAPLTPATPSSLDPFFSR 33 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 ES(0.238)QLAHIKDEPPPLS(0.761)PAPLT(0.001)PATPSSLDPFFSR;ES(0.009)QLAHIKDEPPPLS(0.991)PAPLTPATPSSLDPFFSR;ES(0.059)QLAHIKDEPPPLS(0.941)PAPLTPATPSSLDPFFSR;ES(0.058)QLAHIKDEPPPLS(0.942)PAPLTPATPSSLDPFFSR 155.86 1.7289e-07 1196490000.0 397025.0 526126.0 493979.0 610141.0 429143.0 488176.0 421005.0 385581.0 787581.0 497759.0 True False 375001.23180028447 500850.1172287741 525821.6767343449 668128.6171944197 462914.11261033855 485129.1125043071 463564.29401284555 384243.5095062823 644576.1437013417 493349.2425106419 0.7601131196470732 1.0152039854768204 1.065820379207337 1.3542710915989857 0.9383091585477668 0.9833381116295978 0.9396270513232745 0.7788468622164629 1.3065311308093024 1.0 18.912249768216295 ESRPGLVTVTSSQS(ph)TPAKAPR ddPTM_KYSE-520_SHP099_60min_R1 1 ESRPGLVTVTSSQSTPAKAPR 21 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ES(0.002)RPGLVT(0.008)VT(0.094)S(0.094)S(0.094)QS(0.354)T(0.354)PAKAPR 50.055 0.049841 1492000000.0 742520.0 924010.0 801490.0 700640.0 573760.0 828210.0 535500.0 763330.0 870880.0 670940.0 True False 701330.9354230762 879619.1726327148 853155.3278293422 767228.6149449035 618911.6477521654 823040.8341810999 589633.5659763624 760682.1863925611 712750.1450982506 664995.9935834211 1.054639339470091 1.3227435670593557 1.2829480719605528 1.1537341914055572 0.9306998143207993 1.2376628462767614 0.8866723584288712 1.143889878634489 1.071811186797532 1.0 19.342986123238997 -5.528195598914013 24.535040253968294 1.0529484916189733 1.2283682457847058 0.3258792120732168 0.11410913893063467 124.29365617539841 573557.6731178235 0.031929662835994105 0.041363520799438704 2.9634963800982877e-06 5.528195598914013 0.17541975416573252 ESRPGLVTVTSSQST(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 5 ESRPGLVTVTSSQSTPAK 18 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 ESRPGLVTVTSS(0.001)QS(0.102)T(0.897)PAK;ESRPGLVTVTSSQS(0.108)T(0.891)PAK;ESRPGLVTVTSSQS(0.095)T(0.905)PAK;ESRPGLVTVTSSQS(0.105)T(0.894)PAK;ESRPGLVTVTSSQS(0.148)T(0.852)PAK 162.65 7.365700000000001e-08 4512830000.0 2802760.0 3038190.0 2303330.0 2246510.0 2171950.0 2778480.0 2291700.0 3066490.0 2920320.0 3397630.0 True False 2647285.315636456 2892230.7919838345 2451806.337258305 2460017.634962137 2342870.10829496 2761138.475695178 2523367.4008366605 3055853.0619141497 2390063.503276363 3367529.6415161397 0.7861208652775472 0.8588583026344752 0.7280726818352354 0.7305110561267636 0.6957236780966078 0.8199299693326677 0.749322996218849 0.9074465222935154 0.7097379259296738 1.0 21.683259213892267 -11.328909576736983 0.37783293246100036 1.3064356545804958 0.7693532855252482 0.5109122173876501 0.06529444203527232 47.75620065145873 2.299116423867532 12.266251764052342 0.045426209688655135 4.689110026561297e-12 11.328909576736983 -0.5370823690552476 ESRPS(ph)EEREWDR ddPTM_KYSE-520_SHP099_60min_R1 1 ESRPSEEREWDR 12 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 ES(0.017)RPS(0.983)EEREWDR 69.456 0.019949 920080000.0 1309400.0 1170600.0 1275000.0 1139100.0 1211900.0 1084200.0 1267800.0 1296100.0 1447600.0 1147600.0 True False 1236764.971775813 1114362.6188935784 1357188.5400721272 1247359.7215170972 1307269.635232238 1077433.1056364304 1395961.5965356345 1291604.1316120133 1184752.33102635 1137433.1568192898 1.087329804271131 0.9797170165232165 1.193202898944286 1.0966444173345582 1.1493155684751426 0.9472496024727791 1.227291105562011 1.1355428878333793 1.0416017186797888 1.0 20.117350334715653 -4.7428283512632055 24.999914351511066 1.1045924609156963 1.0335234653821126 0.08423602336594926 0.08448816507439638 560.4130130653944 752782.2937632601 0.0205899786475908 0.05427119389038377 1.8078885271323138e-05 4.7428283512632055 -0.0710689955335837 ESS(ph)KVPR ddPTM_KYSE-520_SHP099_60min_R1 1 ESSKVPR 7 1 E5RJ29;Q9NYI0-2;Q9NYI0 E5RJ29 PSD3 PH and SEC7 domain-containing protein 3 1 ES(0.308)S(0.692)KVPR 64.42 0.023358 1143000000.0 1853300.0 1613500.0 1436100.0 1010300.0 1992300.0 2113700.0 1231900.0 1528300.0 1706100.0 1852900.0 True False 1750493.7545380457 1535985.0380871228 1528673.3038412435 1106318.6082422296 2149082.6753636333 2100507.614262796 1356432.474185399 1522998.6840079022 1396315.2472810547 1836484.7475343877 0.9531763097342403 0.836372335871176 0.8323909609887024 0.6024109972748434 1.1702153683818668 1.1437653468578368 0.7386026352827089 0.8293010252617872 0.7603195448019419 1.0 20.808515483499992 -4.236779993503014 20.72524065754827 0.8767756696380256 0.9531772509539231 0.016691582815897665 0.1692219403245919 3913.4321279936403 3288534.9480219954 0.04427470809126302 1.8797626290190705 5.7972229990948805e-05 4.236779993503014 0.07640158131589758 ESS(ph)PEKEAEEGCPEKESEEGCPK ddPTM_KYSE-520_SHP099_60min_R1 5 ESSPEKEAEEGCPEKESEEGCPK 23 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 ES(0.141)S(0.859)PEKEAEEGCPEKESEEGCPK;ES(0.169)S(0.831)PEKEAEEGCPEKESEEGCPK;ES(0.26)S(0.74)PEKEAEEGCPEKESEEGCPK;ES(0.128)S(0.872)PEKEAEEGCPEKESEEGCPK;ES(0.093)S(0.907)PEKEAEEGCPEKESEEGCPK 307.68 1.215e-60 12415500000.0 11346500.0 10186370.0 9594370.0 9818940.0 10218700.0 10112490.0 9508980.0 10450420.0 14093700.0 9828120.0 True False 10717087.02631301 9697001.495146906 10212838.441734761 10752129.10542803 11022853.553550353 10049374.19887231 10470240.497101614 10414169.932166364 11534639.35326475 9741050.50296166 1.10019828180283 0.9954780023159349 1.0484329630186866 1.1037956432069584 1.1315877635783713 1.0316519964470883 1.074857428766872 1.0691013180765307 1.184126840298977 1.0 23.21564593441304 -5.170630937281082 6.3666620724208665 1.0871146274816952 1.0419934423465549 0.08849342790275005 0.05326992162475361 0.5131936247006631 29.900572108500683 0.014027202179841323 0.024561006293543956 6.7510148410588715e-06 5.170630937281082 -0.045121185135140296 ESS(ph)PIPS(ph)PTSDR ddPTM_KYSE-520_SHP099_60min_R1 2 ESSPIPSPTSDR 12 0 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 ES(0.006)S(0.994)PIPS(0.998)PT(0.002)SDR;ES(0.028)S(0.972)PIPS(0.998)PT(0.002)SDR 162.67 1.6684e-05 1086190000.0 2972500.0 2827400.0 2532030.0 2697860.0 2745450.0 2739550.0 2575630.0 2779790.0 3361800.0 2625730.0 True False 2807609.4994681575 2691567.4599860786 2695248.705191239 2954263.8032588153 2961501.295526322 2722451.4522655285 2835999.8161264225 2770147.5572978654 2751381.8640815 2602468.0749870287 1.078825721803389 1.0342364949085856 1.035651015701575 1.1351777305754422 1.1379587415461696 1.046103688430106 1.0897347188939321 1.064430946885553 1.057220217425804 1.0 21.311449035119608 -9.30757509766326 7.446971462028092 0.9999999999959136 1.0759209166319261 0.2943402034142848 0.03505621105151609 23509127.19795864 0.0 0.036513679544728006 0.009128419886182002 4.925211698358068e-10 9.30757509766326 0.07592091663601253 ESS(ph)PIPS(ph)PTSDRK ddPTM_KYSE-520_SHP099_60min_R1 7 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 ES(0.012)S(0.988)PIPS(0.867)PT(0.132)S(0.001)DRK;ES(0.018)S(0.982)PIPS(0.873)PT(0.117)S(0.01)DRK;ES(0.267)S(0.733)PIPS(0.961)PT(0.02)S(0.019)DRK;ES(0.056)S(0.944)PIPS(0.996)PT(0.004)SDRK;ES(0.049)S(0.951)PIPS(0.997)PT(0.003)SDRK;ES(0.058)S(0.942)PIPS(0.763)PT(0.231)S(0.005)DRK;ES(0.126)S(0.874)PIPS(0.98)PT(0.02)SDRK 260.97 4.8531e-25 6468060000.0 8768310.0 8016500.0 7745160.0 8036910.0 8195610.0 8057110.0 8253300.0 8540660.0 9903890.0 8059400.0 True False 8281914.365107368 7631375.306988182 8244425.406294157 8800735.510014897 8840557.880357847 8006822.587856791 9087624.108445782 8511034.443865033 8105593.232749747 7987999.986118317 1.0367944891712344 0.9553549474524432 1.0321013295720407 1.1017445574998705 1.106729831712709 1.0023563597610397 1.137659504786982 1.0654775236173828 1.0147212377110397 1.0 22.92940289959892 -4.998957456782114 24.527170112828244 1.0666206234081759 0.9954880499730494 0.2269426069883833 0.047401377406103284 34.75439706279757 817520.0330168875 0.01198618656343625 0.024608843831990836 1.0024034280861403e-05 4.998957456782114 -0.07113257343512647 ESS(ph)PIPSPTSDRK ddPTM_KYSE-520_SHP099_60min_R1 1 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 ES(0.005)S(0.995)PIPSPTSDRK 107.74 0.00026178 581850000.0 673350.0 571760.0 530920.0 534540.0 611820.0 622840.0 461580.0 495540.0 622450.0 512300.0 True False 635997.9332100532 544291.791370743 565143.9527020351 585342.5208846888 659966.7532203873 618952.624529233 508241.010986685 493821.08739990497 509428.7706875871 507761.4205633687 1.2525526900102104 1.0719439668473498 1.1130108153451272 1.1527904586276814 1.2997575760839502 1.2189831670206375 1.0009445192247655 0.9725455054304899 1.0032837274686377 1.0 18.95379125840155 -6.7706020435229535 24.608169916733765 0.9919054802247056 1.1802099471597083 0.6924925614878956 0.06218444127973543 104.55257957805395 280793.5761577293 0.02833751572633325 0.0194144301532593 1.6958910822691832e-07 6.7706020435229535 0.1883044669350027 ESS(ph)PKKEETVASK ddPTM_KYSE-520_SHP099_60min_R1 1 ESSPKKEETVASK 13 2 J3QQY0 J3QQY0 MSL1 1 ES(0.283)S(0.717)PKKEETVASK 159.14 8.902600000000001e-07 1640800000.0 1460300.0 1136500.0 1165600.0 1275000.0 1286900.0 1185100.0 1291600.0 1291400.0 1487000.0 1265600.0 True False 1379294.2479641226 1081900.834078722 1240736.4410259388 1396175.6166572704 1388171.7085406133 1177703.3513094746 1422167.5328012516 1286920.4348150254 1216998.2842195227 1254387.7686219008 1.0995756515383173 0.8624931310254428 0.9891171391036764 1.1130335065297559 1.1066527777655952 0.9388670559210941 1.133754304989499 1.0259350951969706 0.970193041308546 1.0 20.25855196641978 -5.016742585118681 24.357088510090534 1.0451025915401746 0.96722709291086 0.09205254694565934 0.08002910164503536 918.4605317108719 1336181.3359984069 0.0208737468825649 0.0374182283724044 9.621824138430341e-06 5.016742585118681 -0.07787549862931464 ESS(ph)PLPK ddPTM_KYSE-520_SHP099_60min_R1 1 ESSPLPK 7 0 Q9HCE3 Q9HCE3 ZNF532 Zinc finger protein 532 1 ES(0.207)S(0.793)PLPK 85.73100000000001 0.019596000000000002 0.0 505570.0 472710.0 423880.0 413410.0 413950.0 473740.0 400000.0 480260.0 593030.0 465900.0 True False 477525.0242711913 450000.3020478246 451203.98303197976 452700.3621037517 446525.50994668354 470783.21293507016 440435.9036238006 478594.0901535264 485350.70106973953 461772.48846471537 1.034113196866382 0.9745065227769837 0.9771131765171343 0.9803536880442437 0.9669816221214814 1.0195133419496543 0.9537941619002599 1.0364283323693426 1.0510602367919668 1.0 18.816822697055446 -7.286797368015202 24.43644731458163 1.0328082299498764 0.9860613638363098 0.36626271852218906 0.025499031457894325 570.3090582854087 549579.3960663386 0.013194017660783501 0.006342563409366185 5.166573736917728e-08 7.286797368015202 -0.0467468661135666 ESS(ph)PLS(ph)SRK ddPTM_KYSE-520_SHP099_60min_R1 1 ESSPLSSRK 9 1 A0A0A0MS66;Q14693-6;Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7 A0A0A0MS66 LPIN1 Phosphatidate phosphatase LPIN1 2 ESS(1)PLS(0.628)S(0.372)RK 87.895 0.0050391 611950000.0 314750.0 517160.0 891860.0 397830.0 219900.0 427140.0 239610.0 254580.0 359130.0 471930.0 True False 297290.1900614306 492314.8573270146 949350.722626454 435639.6435880492 237204.87894015116 424474.0608204616 263832.1171682474 253696.92139941876 293921.0449305695 467749.0673559838 0.6355762326623214 1.0525191639822873 2.029615426050532 0.93135331311415 0.5071199399305797 0.9074824311673348 0.5640462709195657 0.5423782517268835 0.628373342553089 1.0 18.835375251318716 -5.518185061475178 24.905790628897936 0.6772990626051598 1.2638850209238108 0.3250740873050745 0.352887414099127 212.02308286554748 1125047.6792278152 0.10515112388944516 0.1395251515382063 3.0325986585126934e-06 5.518185061475178 0.586585958318651 ESS(ph)PLYS(ph)PTFSDSTSAVK ddPTM_KYSE-520_SHP099_60min_R1 13 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 ES(0.154)S(0.846)PLYS(0.998)PT(0.001)FS(0.001)DSTSAVK;ES(0.064)S(0.936)PLYS(1)PTFSDSTSAVK;ES(0.091)S(0.909)PLYS(0.897)PT(0.09)FS(0.013)DSTSAVK;ES(0.002)S(0.998)PLYS(0.999)PT(0.001)FSDSTSAVK;ESS(1)PLYS(0.999)PT(0.001)FSDSTSAVK;ESS(1)PLYS(0.955)PT(0.045)FSDSTSAVK;ES(0.414)S(0.586)PLYS(0.9)PT(0.096)FS(0.003)DSTSAVK;ES(0.434)S(0.566)PLYS(0.984)PT(0.014)FS(0.002)DSTSAVK;ES(0.001)S(0.999)PLYS(0.987)PT(0.013)FSDSTSAVK;ES(0.084)S(0.916)PLYS(0.997)PT(0.003)FSDSTSAVK;ES(0.053)S(0.947)PLYS(0.999)PT(0.001)FSDSTSAVK;ES(0.094)S(0.906)PLYS(0.988)PT(0.011)FS(0.001)DSTSAVK;ES(0.117)S(0.883)PLYS(0.972)PT(0.024)FS(0.004)DSTSAVK 341.01 3.6939999999999995e-59 26232190000.0 22228690.0 21101710.0 19774080.0 20899430.0 22267600.0 20980450.0 21157940.0 23543270.0 28547770.0 22626880.0 True False 20995620.253905058 20087952.177287538 21048748.836446658 22885705.543557256 24019933.434687175 20849503.229247212 23296791.056795396 23461603.89141052 23364214.598717906 22426423.446646236 0.9362001169671508 0.8957269635560902 0.9385691341520798 1.0204795070423816 1.071055020959182 0.9296847211883514 1.0388099160001958 1.046158962762254 1.0418163491072363 1.0 24.41869622278944 -5.197362794601522 3.862960563682107 1.0223878448740467 0.9166901137548553 0.5991894072936659 0.036834417426429705 0.15607247616418218 4.652233914178683 0.010416155242853949 0.018654842203898632 6.348004199639953e-06 5.197362794601522 -0.10569773111919134 ESS(ph)PLYSPTFSDSTSAVK ddPTM_KYSE-520_SHP099_60min_R1 9 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.081)S(0.919)PLYSPTFSDSTSAVK;ES(0.161)S(0.839)PLYSPTFSDSTSAVK;ES(0.079)S(0.921)PLYSPTFSDSTSAVK;ES(0.121)S(0.879)PLYSPTFSDSTSAVK;ES(0.003)S(0.997)PLYSPTFSDSTSAVK;ES(0.099)S(0.901)PLYSPTFSDSTSAVK;ES(0.009)S(0.99)PLYSPTFSDSTSAVK;ES(0.138)S(0.862)PLYSPTFSDSTSAVK;ES(0.106)S(0.894)PLYSPTFSDSTSAVK 266.71 6.3159e-30 44710300000.0 29711570.0 32094280.0 23787300.0 21493010.0 22144340.0 25608230.0 20293560.0 25379160.0 29632620.0 24697780.0 True False 28063409.983553585 30552422.614303622 25320667.419025663 23535699.2082909 23886973.573940642 25448399.53767941 22345031.090859536 25291125.617500447 24252083.18556094 24478976.883782078 1.1464290405922268 1.248108642749091 1.0343842203552724 0.9614658047201261 0.9758158475065332 1.0396022537420508 0.9128253683536777 1.0331773969792193 0.9907310791909992 1.0 24.545039925038687 -4.877320308003338 4.971856179715626 0.9883934455078317 1.1956646345893596 0.8002797012871652 0.041171292303837315 0.07554146753015674 2.9338165261517273 0.010280969004281161 0.02252718754675625 1.326415816891335e-05 4.877320308003338 0.20727118908152786 ESS(ph)RDTS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 ESSRDTSPVR 10 1 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4M5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 2 ES(0.373)S(0.628)RDT(0.201)S(0.798)PVR 94.09 0.016064 151230000.0 247870.0 223810.0 197040.0 215510.0 224730.0 217810.0 211180.0 222080.0 236920.0 201100.0 True False 234120.15698340515 213057.83165434108 209741.51367514711 235992.00560455586 242414.97246121068 216450.56699748288 232528.13531818544 221309.65631386178 193901.30026717487 199318.41045343236 1.1746037731828274 1.0689320227351438 1.0522937304085613 1.1839950211708703 1.216219675391437 1.0859537084661488 1.1666164444579092 1.1103322357949836 0.9728218272765972 1.0 17.60471544825234 -7.706097096090594 5.028067078325194 0.9856502361930516 1.132931129038881 0.5715628113464313 0.050779069274746534 0.1414198782604033 7.188995442072413 0.040639286621442686 0.013709215438860905 1.967446374590236e-08 7.706097096090594 0.14728089284582946 ESSEEEYDS(ph)GVEEEGWPR ddPTM_KYSE-520_SHP099_60min_R1 1 ESSEEEYDSGVEEEGWPR 18 0 O76031 O76031 CLPX ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial 1 ESSEEEYDS(1)GVEEEGWPR 188.16 1.9395e-12 78345000.0 66863.0 50408.0 64214.0 52333.0 56383.0 52354.0 63856.0 65310.0 79989.0 59321.0 True False 63153.97610191405 47986.324016049424 68353.33718603282 57306.712585509784 60820.02132461369 52027.23926626974 70311.18765450358 65083.454853468575 65465.01395859805 58795.46209103964 1.0741301089551032 0.816156933025661 1.1625614419050512 0.974679176715634 1.034433936932738 0.8848852856315697 1.1958607884675325 1.1069469060842234 1.1134365073486656 1.0 15.843417189859515 -6.768564130486471 24.99999763283385 1.1129732740548934 0.9921987317413411 0.23240226356539018 0.10000186269319881 232.11602228953632 814461.3890122318 0.03919816825076958 0.0270505852494015 1.7038676975773043e-07 6.768564130486471 -0.12077454231355234 ESSFEESNIEDPLIVTPDCQEKT(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 3 ESSFEESNIEDPLIVTPDCQEKTSPK 26 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 ESSFEESNIEDPLIVT(0.001)PDCQEKT(0.5)S(0.5)PK;ESSFEESNIEDPLIVT(0.006)PDCQEKT(0.584)S(0.41)PK;ESSFEESNIEDPLIVTPDCQEKT(0.5)S(0.5)PK 130.32 7.9527e-09 901020000.0 587701.0 595332.0 528207.0 414905.0 508670.0 525958.0 431672.0 463532.0 752289.0 524314.0 True False 555100.0539771022 566731.35710845 562256.0683810815 454337.4464542632 548699.4350636047 522675.30102778604 475309.61847273284 461924.11568118207 615692.2812624209 519668.98587011907 1.068180070526353 1.0905622088636502 1.0819504024079016 0.8742823966943754 1.0558633475978518 1.00578505787224 0.9146391864753827 0.8888814384559613 1.184777806648444 1.0 18.98723343518109 -5.112065826769045 23.11120881626464 0.984385776228229 1.0813127844091674 0.1925253389244086 0.08504996594338055 19.485408645443083 3984.9937501687823 0.022505835371246462 0.03898130843470354 7.72563477432509e-06 5.112065826769045 0.09692700818093847 ESSFEESNIEDPLIVTPDCQEKTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 ESSFEESNIEDPLIVTPDCQEKTSPK 26 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 ESSFEESNIEDPLIVT(0.001)PDCQEKT(0.17)S(0.828)PK;ESSFEESNIEDPLIVTPDCQEKT(0.006)S(0.994)PK;ESSFEESNIEDPLIVTPDCQEKT(0.044)S(0.956)PK;ESSFEESNIEDPLIVTPDCQEKT(0.106)S(0.894)PK;ESSFEESNIEDPLIVTPDCQEKT(0.061)S(0.939)PK;ESSFEESNIEDPLIVTPDCQEKT(0.161)S(0.839)PK;ESSFEESNIEDPLIVTPDCQEKT(0.254)S(0.746)PK 189.24 2.0165e-15 2371160000.0 2119430.0 2259140.0 2024517.0 1369645.0 1644277.0 2013030.0 1600185.0 1832339.0 2495780.0 1931735.0 True False 2001860.9929210404 2150607.523361726 2155020.605161733 1499815.6490012165 1773672.2452436327 2000465.9330744338 1761947.3161006263 1825983.0436801375 2042609.26549388 1914621.3307670904 1.0455649692981315 1.1232547599895841 1.1255596971221076 0.783348448541685 0.9263827874167752 1.0448363344374472 0.9202588980844084 0.9537045338090744 1.0668476490207657 1.0 20.86862765690821 ESSPFLS(ph)PLEASR ddPTM_KYSE-520_SHP099_60min_R1 1 ESSPFLSPLEASR 13 0 Q9UP95-3;Q9UP95-5;Q9UP95-2;Q9UP95-6;Q9UP95;Q9UP95-4 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 ESSPFLS(1)PLEASR 127.32 5.7246999999999996e-05 196110000.0 232350.0 211790.0 209470.0 181760.0 227040.0 250800.0 215770.0 278690.0 275510.0 239920.0 True False 219461.0823217581 201615.29049672867 222972.77136384987 199034.41575186315 244906.75631910813 249234.66417046357 237582.13731226852 277723.28943673486 225484.3290419104 237794.49545493542 0.9229022812403507 0.8478551621264796 0.9376700286407832 0.8370017790827387 1.0299092746052254 1.048109476603491 0.9991069677947733 1.1679130288756678 0.9482319118048805 1.0 17.859355793928366 -5.792605895788595 11.770536730443437 1.0398119362142022 0.8872903044440034 0.5841629663401364 0.06007965259913984 0.48266133707761644 180.83577223532617 0.017486878236243987 0.01992041932042663 1.6121078925904396e-06 5.792605895788595 -0.15252163177019884 ESSPIPS(ph)PTSDRK ddPTM_KYSE-520_SHP099_60min_R1 5 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 ESSPIPS(0.94)PT(0.03)S(0.03)DRK;ESSPIPS(0.576)PT(0.14)S(0.284)DRK;ESSPIPS(0.993)PT(0.007)SDRK;ESS(0.007)PIPS(0.9)PT(0.046)S(0.046)DRK;ESSPIPS(0.985)PT(0.007)S(0.007)DRK 179.5 4.1466000000000004e-07 1617890000.0 1626540.0 1612990.0 1409140.0 1335663.0 1363120.0 1653390.0 1461530.0 1687430.0 2013960.0 1647220.0 True False 1536312.5837728987 1535499.5392526486 1499975.419103718 1462604.0099382757 1470389.7889081358 1643070.5797161208 1609275.7155582337 1681576.6991791208 1648275.6318001004 1632626.9123177675 0.9410065289147196 0.9405085311700323 0.9187496590842483 0.8958593043537927 0.9006281703519692 1.0063968487347346 0.9856971629076093 1.0299822246540464 1.0095849941981645 1.0 20.63876371341123 -6.269141344607866 24.923748588322756 1.006916448017475 0.9191874482807074 0.8687620802433622 0.016902717809108635 211.49493747609432 684400.8632912308 0.0065590317575199945 0.005892821264334901 5.380946268208381e-07 6.269141344607866 -0.08772899973676762 ESSPIPSPT(ph)SDRK ddPTM_KYSE-520_SHP099_60min_R1 1 ESSPIPSPTSDRK 13 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 ESS(0.002)PIPS(0.194)PT(0.402)S(0.402)DRK 95.631 0.0021344999999999997 0.0 177340.0 161650.0 151990.0 154490.0 152340.0 183290.0 145700.0 162550.0 252670.0 177970.0 True False 167502.5966814744 153884.09135840312 161787.51859259827 169172.68315088766 164328.2913039683 182146.01912202683 160428.7778949692 161986.15198945536 206791.49729236515 176393.32425856488 0.9495971425536599 0.872391809640331 0.9171975145467705 0.9590651112335017 0.9316015330777986 1.032612883098849 0.9094946113709259 0.918323596827333 1.1723317657375816 1.0 17.428436436458618 -7.744402998990452 24.99995637108489 1.0861659018550776 0.9364405142553875 0.5423147067792673 0.055075846315881936 150.4421791712626 220767.48602988402 0.03633597254552496 0.013658213045932647 1.8013454255601724e-08 7.744402998990452 -0.14972538759969 ESSPLYS(ph)PTFSDSTSAVK ddPTM_KYSE-520_SHP099_60min_R1 3 ESSPLYSPTFSDSTSAVK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ESSPLY(0.007)S(0.991)PT(0.002)FSDSTSAVK;ES(0.022)S(0.068)PLY(0.213)S(0.556)PT(0.129)FS(0.01)DS(0.001)T(0.001)SAVK;ESSPLYS(0.955)PT(0.043)FS(0.002)DSTSAVK 156.06 4.6388999999999995e-07 4182220000.0 1906520.0 2155810.0 1683380.0 1586350.0 1619540.0 2268050.0 1876380.0 2503660.0 2814530.0 2488970.0 True False 1800761.5350466033 2052241.651663219 1791893.3683032328 1737116.227046482 1746988.5840779098 2253894.258659571 2066062.8021040666 2494975.387818638 2303482.3005274883 2466919.662189357 0.7299635908890736 0.8319045338679101 0.7263687568621315 0.704164085142852 0.7081659815899646 0.9136472067595712 0.8375071283312342 1.0113727763653162 0.9337484052817431 1.0 21.234279302859154 -6.695821719557657 1.3267280481051011 0.9761424149224323 0.7436747318322369 0.7610258453545933 0.05575968909486713 0.21643955980197452 0.7736347602638322 0.033806537758832626 0.02084143624158352 2.0145510652202782e-07 6.695821719557657 -0.2324676830901954 ESSSCGKDT(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 ESSSCGKDTPSK 12 1 K7EPP5;O43148;O43148-2 K7EPP5 RNMT mRNA cap guanine-N7 methyltransferase 1 ESSSCGKDT(0.999)PS(0.001)K 150.9 5.6011e-05 410210000.0 1359700.0 1316400.0 1077600.0 1379800.0 1123100.0 1487100.0 1222500.0 1307600.0 1817900.0 1823800.0 True False 1284274.7305052492 1253158.1680433154 1147063.8202209629 1510935.7771480025 1211481.5804351242 1477818.457288263 1346082.2304502407 1303064.2407961339 1487815.185529705 1807642.5508949286 0.7104694066143938 0.6932555152692667 0.6345634094821866 0.8358598199627286 0.6701997470879092 0.8175390961872544 0.7446617307076676 0.720863889905121 0.8230693533924152 1.0 20.785677992080036 -13.99999999998629 0.16256270279458376 2.0122021977781137 0.6671911592164664 0.6837173541236202 0.057038055929605036 74.14887016722953 0.6859249980874426 24.069566341165864 0.22483557535427792 1.0000000000315683e-14 13.99999999998629 -1.3450110385616472 ESSTSEGADQKMS(ph)S(ph)PEDDSDTKR ddPTM_KYSE-520_SHP099_60min_R1 8 ESSTSEGADQKMSSPEDDSDTKR 23 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 2 ESS(0.001)TS(0.001)EGADQKMS(0.999)S(0.999)PEDDSDTKR;ES(0.015)S(0.134)T(0.119)S(0.189)EGADQKMS(0.771)S(0.77)PEDDS(0.001)DTKR;ES(0.003)S(0.003)T(0.003)S(0.004)EGADQKMS(0.987)S(0.999)PEDDS(0.001)DTKR;ESSTSEGADQKMS(1)S(1)PEDDSDTKR;ES(0.037)S(0.186)T(0.178)S(0.182)EGADQKMS(0.69)S(0.725)PEDDS(0.001)DTKR;ESSTSEGADQKMS(1)S(0.967)PEDDS(0.033)DTKR;ESSTSEGADQKMS(1)S(0.971)PEDDS(0.029)DTKR;ES(0.016)S(0.016)T(0.017)S(0.017)EGADQKMS(0.931)S(0.823)PEDDS(0.163)DT(0.017)KR 198.93 1.8785999999999998e-15 13227520000.0 11607120.0 10150550.0 9308080.0 9407160.0 9796530.0 9676840.0 9514740.0 10042240.0 12036150.0 9540590.0 True False 10963249.915379915 9662902.341713835 9908093.730254585 10301213.658034224 10567461.176369075 9616443.252118459 10476582.774113795 10007405.81331644 9850688.566650167 9456067.795066703 1.1593878293786684 1.0218732089415685 1.0478027384092685 1.089376036771695 1.1175322983494465 1.0169600578726208 1.1079217071158798 1.0583052099665966 1.0417320159008738 1.0 23.172808948246548 -7.992810328758944 1.7209070918212293 1.0005113288335206 1.0763134340569824 0.2632775573044659 0.04149186785034496 0.5252809848171228 3.5374971627363494 0.03807935131217188 0.010962738859193263 1.016692620334442e-08 7.992810328758944 0.07580210522346187 ESSTSEGADQKMS(ph)SPEDDS(ph)DTKR ddPTM_KYSE-520_SHP099_60min_R1 1 ESSTSEGADQKMSSPEDDSDTKR 23 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 2 ESSTSEGADQKMS(0.999)S(0.253)PEDDS(0.612)DT(0.136)KR 161.68 2.0461e-10 507300000.0 844230.0 764730.0 686390.0 726180.0 721500.0 711320.0 671800.0 711590.0 932530.0 719470.0 True False 797398.8789692189 727991.2229168683 730635.79766283 795195.9288660211 778277.9452265543 706880.3880292439 739712.1001361737 709121.6603763553 763206.0591682801 713096.0555391898 1.1182208522613206 1.0208880237970406 1.0245966051661552 1.1151315768599415 1.0914068857639085 0.99128354804144 1.0373246274330585 0.9944265640905426 1.0702710430661417 1.0 19.443736898253505 -6.256362616500078 24.99219706867728 1.0194792836013953 1.0706304467120469 0.3525621953874021 0.03737729557637693 544.1124262848341 2678585.3593964037 0.012732068370520296 0.01233986584905049 5.541628185279683e-07 6.256362616500078 0.0511511631106516 ESSTSEGADQKMS(ph)SPEDDSDTKR ddPTM_KYSE-520_SHP099_60min_R1 1 ESSTSEGADQKMSSPEDDSDTKR 23 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 ESSTSEGADQKMS(0.994)S(0.006)PEDDSDTKR 170.27 9.8201e-11 452520000.0 393130.0 359730.0 346400.0 308060.0 346490.0 359000.0 313560.0 340170.0 448400.0 342570.0 True False 371322.29521477426 342448.0308342616 368729.49825959647 337337.92977838335 373756.7917415783 356759.34783571196 345257.704850697 338990.029666275 366981.86324413837 339535.096315427 1.0936197737562219 1.008579185334433 1.0859834587380857 0.9935288971276109 1.100789861777233 1.0507289281938728 1.016854247461811 0.9983946677234049 1.0808363177372786 1.0 18.373201181935553 ESSVVQAGGS(ph)KK ddPTM_KYSE-520_SHP099_60min_R1 1 ESSVVQAGGSKK 12 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 ESSVVQAGGS(1)KK 97.291 0.0011817 482810000.0 707850.0 664150.0 567780.0 546560.0 533950.0 593780.0 520610.0 577910.0 670320.0 591760.0 True False 668584.1494360081 632243.2370905267 604380.0072801202 598504.8980707438 575968.8272400801 590073.9987684925 573238.3394639669 575905.3650952074 548606.7853920856 586517.466782314 1.1399219755618175 1.0779614809411702 1.0304552575318884 1.0204383193465556 0.9820147904544009 1.0060638125675778 0.977359365968762 0.9819065888262023 0.9353630820268495 1.0 19.1618145475073 -2.73798999038099 0.465116358903994 0.9715020227374249 1.7945117328865314 0.895911959536379 0.017695947079708826 5.0033877834111555 0.27465706548147656 0.010503128496459983 3.065893042704611 0.001828142350681202 2.73798999038099 0.8230097101491065 EST(ph)LHLVLR ddPTM_KYSE-520_SHP099_60min_R1 2 ESTLHLVLR 9 0 P62979;J3QTR3;A0A2R8Y422;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;M0R2S1;F5H2Z3;F5GYU3;F5H6Q2;M0R1M6;J3QS39;P62987;P0CG47 P62979 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin 1 ES(0.393)T(0.607)LHLVLR;ES(0.389)T(0.611)LHLVLR 125.75 0.00086584 0.0 202786.0 176318.0 158588.0 210303.0 176984.0 232750.0 188343.0 214425.0 178514.0 235520.0 True False 191537.05633613106 167847.4186212865 168810.83622977143 230290.1338900974 190911.63389878918 231297.32091577133 207382.54849054385 213681.20972217142 146100.35757173077 233433.4760317871 0.8205209449481404 0.7190374811470073 0.7231646424473588 0.9865343129223605 0.817841712954625 0.9908489769662475 0.8884010640457761 0.9153837459588444 0.6258757743548145 1.0 17.832651943116637 -5.2409062444730585 24.879016407490884 0.8869638490773031 0.750720654841988 0.25126424850656515 0.10671149194311233 1071.8292379430195 1298682.5382968967 0.028063011827457986 0.04853130955700501 5.742404158934684e-06 5.2409062444730585 -0.13624319423531506 ESTEASKEPS(ph)PTKTPTISPVITAPPS(ph)SPVLDTSDIR ddPTM_KYSE-520_SHP099_60min_R1 1 ESTEASKEPSPTKTPTISPVITAPPSSPVLDTSDIR 36 2 A8MVZ6;Q96G01-4;Q96G01-3;Q96G01 A8MVZ6 BICD1 Protein bicaudal D homolog 1 2 ES(0.004)T(0.005)EAS(0.015)KEPS(0.434)PT(0.1)KT(0.117)PT(0.137)IS(0.192)PVIT(0.004)APPS(0.516)S(0.472)PVLDT(0.002)S(0.002)DIR 74.82300000000001 0.0062628 444960000.0 185750.0 168940.0 167200.0 147240.0 158990.0 185000.0 157310.0 152400.0 217400.0 159360.0 True False 175446.07721655528 160823.86881589016 177977.97952945894 161233.64533067975 171501.60847064396 183845.34637773444 173212.4299976502 151871.3599704272 177925.64020801894 157948.1943802039 1.1107824176465826 1.0182064407065274 1.1268123717897052 1.0208008136045372 1.0858092372858348 1.1639597850368102 1.0966407731176915 0.961526407860359 1.1264810016107336 1.0 17.269091919127707 -8.669808236404926 0.6211481210400862 0.9986844656173269 1.081772404901859 0.1316756943504923 0.058658940667619466 5.0020086608579755 2.926158483659821 0.08967342939837354 0.024037362774836438 2.138906319376887e-09 8.669808236404926 0.08308793928453218 ESTPGDS(ph)PSTVNK ddPTM_KYSE-520_SHP099_60min_R1 1 ESTPGDSPSTVNK 13 0 Q5T6F2 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 1 EST(0.002)PGDS(0.98)PS(0.004)T(0.014)VNK 148.41 0.0017327000000000002 0.0 648870.0 723350.0 669550.0 503140.0 557210.0 579000.0 555950.0 687620.0 827160.0 626600.0 True False 612875.887609723 688599.1802295147 712710.2643178783 550958.2743254434 601059.2569087845 575386.2462308548 612150.8515491302 685234.8067117138 676968.5950067384 621048.8114874227 0.9868401263692537 1.1087682119225182 1.1475913827303281 0.887141661226094 0.9678132310876454 0.9264750782676723 0.9856726882433254 1.1033509670046135 1.0900408832365156 1.0 19.24434713631804 -10.341497115594768 13.5473354589329 0.9999999999739685 1.0217028209042969 0.006683791778700154 0.08207162561979083 1.243600733397861e-10 3.719722885824075e-18 0.08630665262449505 0.020932438095034405 4.5551521150027815e-11 10.341497115594768 0.02170282093032838 ESTQLS(ph)PADLTEGKPTDPSK ddPTM_KYSE-520_SHP099_60min_R1 12 ESTQLSPADLTEGKPTDPSK 20 1 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 ES(0.322)T(0.264)QLS(0.413)PADLT(0.001)EGKPTDPSK;ES(0.252)T(0.202)QLS(0.542)PADLT(0.003)EGKPTDPSK;ES(0.072)T(0.065)QLS(0.859)PADLT(0.004)EGKPTDPSK;ES(0.012)T(0.053)QLS(0.915)PADLT(0.019)EGKPTDPSK;EST(0.003)QLS(0.997)PADLTEGKPTDPSK;ESTQLS(1)PADLTEGKPTDPSK;EST(0.001)QLS(0.999)PADLTEGKPTDPSK;EST(0.001)QLS(0.999)PADLTEGKPTDPSK;ES(0.001)T(0.003)QLS(0.997)PADLTEGKPTDPSK;ES(0.03)T(0.154)QLS(0.817)PADLTEGKPTDPSK;ES(0.031)T(0.031)QLS(0.937)PADLT(0.001)EGKPTDPSK;ES(0.003)T(0.014)QLS(0.975)PADLT(0.008)EGKPTDPSK 209.4 8.235799999999999e-19 36213510000.0 22651920.0 19793983.0 18122233.0 18066902.0 18417842.0 20658875.0 20349351.0 22175200.0 21981481.0 21778892.0 True False 21395372.842116997 18843050.345305786 19290421.13577802 19783974.934067864 19867221.382213883 20529935.298104443 22406461.989607193 22098279.406930573 17990198.158442535 21585947.96060156 0.9911713342943104 0.8729313338333771 0.8936564273659275 0.9165210149759168 0.9203775260866616 0.9510786987708605 1.0380114892569567 1.0237344890881843 0.8334217330310464 1.0 24.363589115270273 -6.387558872271043 3.779699958473404 0.977608349119077 0.9148004771300489 0.15438735378629465 0.05940521145330525 0.41519560618474183 10.507187864713233 0.021923709467007765 0.019013388487040733 4.0967657094316097e-07 6.387558872271043 -0.06280787198902815 ESTQLSPADLTEGKPTDPS(ph)KLESPSFTGTGDTEIAHATEDLENNGSK ddPTM_KYSE-520_SHP099_60min_R1 1 ESTQLSPADLTEGKPTDPSKLESPSFTGTGDTEIAHATEDLENNGSK 47 2 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 ESTQLS(0.027)PADLT(0.046)EGKPT(0.078)DPS(0.319)KLES(0.065)PS(0.319)FT(0.065)GT(0.065)GDT(0.014)EIAHATEDLENNGSK 127.13 2.3780999999999998e-07 471120000.0 205850.0 215610.0 201630.0 332020.0 195340.0 171280.0 205600.0 200770.0 268640.0 193500.0 True False 194431.09014819853 205251.77196279215 214627.39241940668 363575.0809745473 210712.1466674357 170210.97798691012 226384.0544626334 200073.57573007012 219861.74786330378 191785.74054072195 1.0137932549104969 1.0702139344880592 1.1190998445154725 1.8957357306621514 1.0986851581006625 0.8875059089743387 1.1804008672613757 1.04321403231534 1.146392569350694 1.0 17.54913593297876 -5.975445908281123 24.99999280921459 1.0545743414483908 1.2800162888284268 0.1641906087979601 0.2398287811934551 446.55941789147545 454666.7743470432 0.07838659850085355 0.08887847644888056 1.0581667032830828e-06 5.975445908281123 0.22544194738003598 ESTQLSPADLTEGKPTDPSKLES(ph)PSFTGTGDTEIAHATEDLENNGSK ddPTM_KYSE-520_SHP099_60min_R1 1 ESTQLSPADLTEGKPTDPSKLESPSFTGTGDTEIAHATEDLENNGSK 47 2 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 ESTQLSPADLT(0.002)EGKPT(0.001)DPS(0.04)KLES(0.952)PS(0.005)FTGTGDTEIAHATEDLENNGSK 238.19 6.1583e-33 1285600000.0 528220.0 688610.0 412710.0 863300.0 558650.0 612490.0 502930.0 695230.0 743930.0 640930.0 True False 498918.583619536 655528.1419753176 439313.94695934776 945347.7724393909 602612.5767163048 608667.2227183697 553771.072523795 692818.4093979025 608851.0649491787 635251.8588359941 0.7853870503169107 1.031918494778554 0.6915586957342024 1.4881464088457796 0.9486199344941767 0.9581510297878751 0.8717346747138989 1.0906200426825836 0.9584404303276011 1.0 19.276969166249557 ESTSSKS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 7 ESTSSKSPPR 10 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347 A0A494C1K3 GTF2I General transcription factor II-I 1 ES(0.014)T(0.002)S(0.007)S(0.002)KS(0.975)PPR;ESTSS(0.002)KS(0.998)PPR;EST(0.004)S(0.008)S(0.103)KS(0.885)PPR;ES(0.001)T(0.001)S(0.003)S(0.027)KS(0.969)PPR;ES(0.001)T(0.002)S(0.001)S(0.025)KS(0.97)PPR;ESTSS(0.015)KS(0.985)PPR;ESTS(0.001)S(0.013)KS(0.986)PPR 147.62 0.00019589 27143160000.0 4457440.0 4432360.0 3928220.0 3776130.0 4069990.0 3979640.0 3802530.0 4053580.0 5267430.0 4055490.0 True False 4210176.917513657 4219422.772492001 4181439.346574222 4135012.259865114 4390275.057924632 3954801.5905874935 4186926.8415165273 4039519.077092685 4310997.493104534 4019561.5137234787 1.0474219397164055 1.0497221545400317 1.0402725103964858 1.028722223990718 1.0922273593613316 0.9838888090367859 1.0416377078001255 1.0049651095775167 1.0725044207896912 1.0 21.93860669846966 -6.266847094415327 24.99817845498373 1.02222443820667 1.0496564135924846 0.24068192368953134 0.027404313738503744 796.4226859840378 3681579.210351187 0.009026124379725716 0.008214265193282595 5.409447442305497e-07 6.266847094415327 0.027431975385814544 ESTSSKS(ph)PPRK ddPTM_KYSE-520_SHP099_60min_R1 5 ESTSSKSPPRK 11 2 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347 A0A494C1K3 GTF2I General transcription factor II-I 1 ES(0.005)T(0.025)S(0.079)S(0.079)KS(0.813)PPRK;EST(0.002)S(0.036)S(0.036)KS(0.926)PPRK;ES(0.004)T(0.051)S(0.187)S(0.187)KS(0.57)PPRK;ESTS(0.001)S(0.008)KS(0.992)PPRK;ESTS(0.001)S(0.004)KS(0.996)PPRK 101.45 0.00088525 51384470000.0 7150400.0 6679050.0 6630540.0 6468610.0 6665860.0 6276420.0 6569920.0 6286730.0 7920140.0 6346590.0 True False 6753753.058030985 6358178.412541565 7057955.217639096 7083384.749541482 7190425.2584447265 6237246.534660212 7234071.629840201 6264922.80096382 6482042.226481775 6290364.150172306 1.073666467758625 1.010780657645615 1.1220264914942586 1.12606910831187 1.1430856921451464 0.9915557169276695 1.150024300205584 0.9959555045461416 1.0304716979388575 1.0 22.584712106689615 -7.288540661904831 24.870132840595176 1.0099101842447258 1.0863516586506223 0.3393603456086215 0.05069221900337327 886.7835170212879 813772.1420181365 0.02776983071602044 0.013344405897313059 5.145876252074137e-08 7.288540661904831 0.07644147440589655 ESVAS(ph)GDDRAEEDMDEAIEK ddPTM_KYSE-520_SHP099_60min_R1 4 ESVASGDDRAEEDMDEAIEK 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 ES(0.016)VAS(0.984)GDDRAEEDMDEAIEK;ES(0.019)VAS(0.981)GDDRAEEDMDEAIEK;ESVAS(1)GDDRAEEDMDEAIEK;ESVAS(1)GDDRAEEDMDEAIEK 291.64 4.2903e-44 5654420000.0 6633330.0 5585570.0 5050070.0 6149420.0 6317820.0 5385750.0 5505940.0 5753520.0 6276630.0 5304610.0 True False 6265365.961684473 5317230.833088504 5375605.592597693 6733859.027909468 6814996.490521443 5352135.536507473 6062534.147996075 5733562.382001668 5136952.2129662335 5257615.282324131 1.1916744807761714 1.0113388955948903 1.0224417923217473 1.2807820021652028 1.2962143718337777 1.017977780630149 1.153095809116739 1.0905252807822685 0.9770498481006092 1.0 22.325977148216353 -7.630728460049608 3.4444519579966473 0.9875807338509891 1.1361124822305257 0.2745272667963933 0.0963818054679895 0.35715762750919156 7.8902288527587 0.08397445354177878 0.027080824666441385 2.3403000394960463e-08 7.630728460049608 0.14853174837953664 ESVDLPEEKLPIS(ph)DSPPDTQEIHVIEQEK ddPTM_KYSE-520_SHP099_60min_R1 2 ESVDLPEEKLPISDSPPDTQEIHVIEQEK 29 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 ES(0.001)VDLPEEKLPIS(0.79)DS(0.208)PPDT(0.002)QEIHVIEQEK;ESVDLPEEKLPIS(0.5)DS(0.5)PPDTQEIHVIEQEK 109.03 5.578399999999999e-05 108420000.0 313194.0 291670.0 282407.0 273555.0 267497.0 276747.0 272266.0 296828.0 344890.0 291971.0 True False 295820.5044832395 277657.7353944045 300611.407087176 299553.58495269023 288547.49205026694 275019.7193189129 299789.30434009427 295798.3729481762 282266.66996938206 289384.364090001 1.0222408021714566 0.9594773244488448 1.0387963013567771 1.0351408787916632 0.9971080951717427 0.9503613651820505 1.0359554334692986 1.0221643241795209 0.9754040127807139 1.0 18.1426274472421 -7.767318104626761 24.988883691509358 0.9877020146493813 1.0066857656936425 0.06554736292198426 0.02995718211739062 496.8275998915725 2111774.7452647113 0.026889968104645348 0.007663654201406986 1.7087632507924742e-08 7.767318104626761 0.0189837510442612 ESVDLPEEKLPISDS(ph)PPDTQEIHVIEQEK ddPTM_KYSE-520_SHP099_60min_R1 3 ESVDLPEEKLPISDSPPDTQEIHVIEQEK 29 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 ESVDLPEEKLPIS(0.003)DS(0.997)PPDTQEIHVIEQEK;ESVDLPEEKLPISDS(1)PPDTQEIHVIEQEK;ESVDLPEEKLPIS(0.034)DS(0.966)PPDTQEIHVIEQEK 214.25 1.7487999999999998e-22 771080000.0 1118480.0 1057200.0 946420.0 879470.0 881480.0 967680.0 939960.0 992490.0 1142880.0 975090.0 True False 1056435.6847653964 1006410.525110449 1007427.7475255409 963054.5643777035 950847.461064869 961640.3501773288 1034980.3299255687 989047.283838907 935361.8016602616 966451.4612085397 1.093107856078289 1.0413461674029039 1.042398700774647 0.9964851863055922 0.9838543364359364 0.9950218803278598 1.07090771908124 1.0233801939748857 0.967831121586385 1.0 19.882337751175235 -4.342824113997445 1.2253809945017204 1.0086464264539108 1.1205439640349504 0.4901757327508681 0.027179265105244012 1.2391439497320715 1.7826765441880417 0.008884968945620164 0.16986284184746478 4.541254968272648e-05 4.342824113997445 0.1118975375810396 ESVNS(ph)PVFGK ddPTM_KYSE-520_SHP099_60min_R1 2 ESVNSPVFGK 10 0 E7ESJ3;Q9UPS8;Q9UPS8-2 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 ESVNS(1)PVFGK;ESVNS(1)PVFGK 183.89 4.4207e-06 2259600000.0 4946800.0 4314200.0 4017100.0 3644400.0 3721300.0 4152500.0 3798200.0 4213200.0 5105200.0 4052800.0 True False 4672391.142798687 4106939.3562537753 4276048.693587252 3990762.680271186 4014145.1386993355 4126582.7072083396 4182159.122859793 4198585.3925682735 4178224.3716190313 4016895.345030685 1.163184684056785 1.022416319940843 1.0645158328252606 0.9934943127677379 0.9993153403075956 1.0273065023497188 1.0411421666819267 1.0452314615969167 1.0401626163320206 1.0 21.937649443659488 -4.2602044224711335 24.980370915076378 1.027242475268333 1.1631847282773369 0.7806811426600653 0.02181135097127357 49.55231017666725 1002211.6313955277 0.005652863937305338 0.0338597519574982 5.492822657624812e-05 4.2602044224711335 0.13594225300900398 ESVPEFPLS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 20 ESVPEFPLSPPK 12 0 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK;ESVPEFPLS(1)PPK 239.61 2.6541e-15 643293110000.0 47573255.0 54880117.0 39621913.0 36617536.0 39472771.0 62865765.0 42212112.0 60229355.0 62082114.0 70093660.0 True False 44934271.71021737 52243593.80258497 42176004.90928224 40097655.61197632 42579053.50835517 62473396.44176346 46479324.23147268 60020433.425142206 50809567.06033675 69472684.70444222 0.6467904889724837 0.7520019418400915 0.6070875926086878 0.5771715283864998 0.6128891331823338 0.8992512194907128 0.6690302012828461 0.8639429105192531 0.7313603508558219 1.0 26.049942514168805 -6.249372042466854 24.95085274353879 0.8139829481282119 0.6402268323987187 0.5035852245229566 0.09516570239434102 683.9200688821596 1414098.0930434912 0.03050341026851713 0.030286683444159582 5.631550170664408e-07 6.249372042466854 -0.17375611572949323 ESVPEFPLS(ph)PPKK ddPTM_KYSE-520_SHP099_60min_R1 4 ESVPEFPLSPPKK 13 1 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 ESVPEFPLS(1)PPKK;ESVPEFPLS(1)PPKK;ESVPEFPLS(1)PPKK;ESVPEFPLS(1)PPKK 183.58 2.1965e-08 4726730000.0 1951640.0 1868320.0 1479630.0 1379101.0 1487870.0 2178810.0 1730050.0 2068940.0 2143250.0 2335980.0 True False 1843378.6387021164 1778563.1027945045 1575009.3172917054 1510170.344398164 1604956.9041777318 2165211.2386014657 1904940.3376608882 2061763.330034224 1754089.8269357728 2315285.0345649417 0.7961778403878036 0.7681832155619271 0.6802658393149683 0.6522610917674486 0.693200569354224 0.9351812870886215 0.8227670931319434 0.8905008667417245 0.7576129075897468 1.0 21.14275838382039 -6.251669107650549 24.97309982162543 0.8707159020868332 0.7150542055914187 0.5621899768610417 0.07168508494411398 541.7418709469852 1384708.6975496337 0.02380436345583071 0.023511965342457104 5.601842476847798e-07 6.251669107650549 -0.1556616964954145 ESVPEFPLS(ph)PPKKK ddPTM_KYSE-520_SHP099_60min_R1 4 ESVPEFPLSPPKKK 14 2 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 ESVPEFPLS(1)PPKKK;ESVPEFPLS(1)PPKKK;ESVPEFPLS(1)PPKKK;ESVPEFPLS(1)PPKKK 151.62 1.4249000000000001e-06 14357580000.0 3815350.0 4833160.0 5121260.0 2566720.0 2856190.0 2962600.0 2201270.0 2339500.0 5923040.0 2907230.0 True False 3603704.929788335 4600967.738878943 5451384.613905722 2810660.297087492 3080955.9035019143 2944109.31447933 2423795.8539249087 2331384.820543407 4847565.243687693 2881474.2039907137 1.2506462576681632 1.596740908701111 1.8918734744721284 0.9754244175411504 1.0692290422849968 1.021737175506159 0.8411652100053713 0.8090944618954223 1.682321235766758 1.0 21.458375673573755 -5.27854149986015 24.93375171396156 1.03908916167801 1.5814522894794865 0.44303015735774665 0.26807413124947865 670.6715636972075 977793.0010144127 0.07512767082489598 0.11174547357079244 5.265728947850191e-06 5.27854149986015 0.5423631278014764 ESVPSAS(ph)PTGIPK ddPTM_KYSE-520_SHP099_60min_R1 3 ESVPSASPTGIPK 13 0 Q5THJ4-2;Q5THJ4;H3BLS7;A0A2R8YD87 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 ESVPS(0.177)AS(0.793)PT(0.03)GIPK;ESVPS(0.196)AS(0.794)PT(0.01)GIPK;ESVPSAS(0.993)PT(0.007)GIPK 176.83 3.3632e-07 1116740000.0 1890930.0 2068950.0 1574290.0 1619000.0 1670190.0 2038430.0 1899200.0 2299900.0 2478940.0 2227260.0 True False 1786036.3434245 1969554.5364427369 1675771.2523530596 1772869.2732298996 1801624.4509188305 2025707.4022527817 2091189.670405807 2291922.183700698 2028826.9849920245 2207528.209182057 0.8090661473749728 0.8921990343092852 0.7591165745392552 0.8031015258857285 0.8161274874880879 0.917636021060567 0.9472991836333741 1.038230077499173 0.9190491775159486 1.0 21.07400044297913 -6.489741593498539 2.0503024468546345 0.9822624803704694 0.8149600118815835 0.7662556695366777 0.04205273755782564 0.1550332913284811 1.30243896290575 0.018279529283911956 0.014351193105396691 3.237862534048095e-07 6.489741593498539 -0.16730246848888586 ESVS(ph)PEDSEK ddPTM_KYSE-520_SHP099_60min_R1 3 ESVSPEDSEK 10 0 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 ESVS(1)PEDSEK;ESVS(1)PEDSEK;ESVS(1)PEDSEK 280.38 6.4078e-33 1554540000.0 6866680.0 7970960.0 6188670.0 6289450.0 6069410.0 6489450.0 6695460.0 6554840.0 7374440.0 7409850.0 True False 6485771.572012787 7588023.116945124 6587601.570422098 6887197.437007907 6547038.036781002 6448946.935410741 7372302.438192524 6532102.789951149 6035427.590504242 7344204.493776061 0.8831142402841909 1.0331987791701185 0.8969795947273588 0.9377731029745359 0.8914563915437502 0.878100131998773 1.0038258662922956 0.8894227816623111 0.8217945994857635 1.0 22.808174799378897 ESVSTEDLSPPS(ph)PPLPK ddPTM_KYSE-520_SHP099_60min_R1 3 ESVSTEDLSPPSPPLPK 17 0 Q13127;Q13127-4 Q13127 REST RE1-silencing transcription factor 1 ESVSTEDLSPPS(1)PPLPK;ESVSTEDLSPPS(1)PPLPK;ESVSTEDLSPPS(1)PPLPK 251.02 3.1797e-23 786080000.0 1855440.0 2426600.0 1789620.0 1438510.0 1469440.0 2110560.0 1707050.0 2407660.0 2596190.0 2498650.0 True False 1752515.0444720602 2310022.4935991443 1904981.7686932415 1575225.5578961985 1585076.5680300847 2097387.21216752 1879615.2732025236 2399308.389412068 2124787.3406239958 2476513.9049202837 0.7076540297190343 0.9327718649225599 0.7692190885375064 0.6360657029894219 0.6400434759848872 0.8469111390816247 0.7589762647680456 0.9688249214531662 0.857975130445468 1.0 21.239879290641028 -7.1765341095108095 1.8484872153541763 0.9445886852078544 0.7507494405662348 0.45138072016319897 0.09188951655177065 0.3794276267326834 2.4377423815063786 0.06798965548016038 0.029342409447195787 6.659872125745647e-08 7.1765341095108095 -0.1938392446416196 ESYDYLK ddPTM_KYSE-520_SHP099_60min_R1 2 ESYDYLK 7 0 F8VXU5;Q9UBQ0;Q9UBQ0-2 F8VXU5 VPS29 Vacuolar protein sorting-associated protein 29 0 ; 105.95 0.029048 661060000.0 913490.0 1135550.0 784500.0 637400.0 1077820.0 1077690.0 840980.0 908750.0 1015050.0 911680.0 False True 862816.8887028326 1080996.4735047002 835070.1252443797 697978.3043587023 1162638.302043082 1070963.7369611922 925994.4655738592 905597.7583538439 830742.5073281947 903603.2244763068 0.9548625606143534 1.1963176361297334 0.9241557606529722 0.7724389261262578 1.28666904958966 1.1852146029933448 1.0247799482018554 1.0022073115981776 0.9193664706206207 1.0 19.785329893383476 -7.361317287767333 3.039016363262992 0.9615158182730087 1.0542268090617029 0.05969699359878189 0.14206650248108066 0.8769022129482782 15.343541800387017 0.09913834963144297 0.041278999210889 4.351938127125821e-08 7.361317287767333 0.09271099078869416 ESYPVFYLFR ddPTM_KYSE-520_SHP099_60min_R1 1 ESYPVFYLFR 10 0 P30040;F8VY02 P30040 ERP29 Endoplasmic reticulum resident protein 29 0 127.56 0.0017327999999999998 0.0 44775.0 77620.0 53013.0 66498.0 117080.0 90971.0 72480.0 35787.0 60286.0 47668.0 False True 42291.24149325036 73891.01869000471 56430.302803799066 72817.9499266472 126293.52990592485 90403.21624502091 79806.98573663259 35662.8632497486 49339.582086387454 47245.69860514282 0.8951342183909806 1.563973459415869 1.1944008548887555 1.5412609417679513 2.673122286992227 1.913469774265975 1.6891905103070142 0.7548383091506791 1.0443190288865094 1.0 15.527895367433226 -5.2979788522643245 7.694442338690143 1.5789076797756523 1.2525041111106323 0.05216135630640428 0.5339207083898516 0.8480444838430317 159.323349177333 0.1670170670613027 0.2512412815186294 5.035251270755687e-06 5.2979788522643245 -0.32640356866501996 ESYSIYVYK ddPTM_KYSE-520_SHP099_60min_R1 2 ESYSIYVYK 9 0 Q16778;P06899;P33778;P23527;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BJ;HIST1H2BB;HIST1H2BO;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-J;Histone H2B type 1-B;Histone H2B type 1-O;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 ; 170.24 0.00063628 1973140000.0 2101430.0 2344700.0 1509500.0 1573250.0 2255400.0 2225000.0 1726370.0 1842150.0 1778480.0 1495090.0 False True 1984859.4888031518 2232057.092533546 1606804.785285397 1722771.2069851418 2432887.148529412 2211112.9496781556 1900888.3273475496 1835760.0116110414 1455552.8638323701 1481844.6657624205 1.3394517891535724 1.5062692764663936 1.0843274078654415 1.162585557575134 1.641796339886727 1.4921354449391773 1.2827851469637865 1.2388343083629003 0.9822573832888732 1.0 20.49896279451215 -7.594703207626264 2.137276566137181 0.9786327079401139 1.3633485249993458 0.46557715808636146 0.15524513602369872 0.3145373220203934 2.628254894842172 0.14831111543116499 0.046304512093387415 2.5427097735923686e-08 7.594703207626264 0.38471581705923186 ESYSVYVYK ddPTM_KYSE-520_SHP099_60min_R1 8 ESYSVYVYK 9 0 P62807;O60814;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;P57053;Q5QNW6-2;Q99880 P62807;Q99880 HIST1H2BC;HIST1H2BK;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;H2BFS;HIST1H2BL Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-L 0 ;;;;;;; 221.7 3.1816e-08 7259480000.0 8857360.0 9104410.0 6314890.0 6195270.0 9169910.0 9035410.0 7295480.0 8013200.0 8152290.0 6857830.0 False True 8366024.584090592 8667020.477601973 6721957.913581247 6784066.598124153 9891529.747349158 8979016.654674849 8032978.315423411 7985404.079494949 6672039.638507037 6797074.9615110075 1.2308271766110996 1.2751103271156616 0.9889486215239472 0.9980861821503344 1.4552627127640572 1.3210118625319367 1.1818287073352594 1.174829485434978 0.9816045396421266 1.0 22.696482602982467 -7.716302320130477 4.34170775706977 0.9868392993463709 1.2054153186188845 0.297180442355659 0.13121134732602227 0.27888783849658844 10.75421984447126 0.11617644286384791 0.036908777919950723 1.921753496314939e-08 7.716302320130477 0.21857601927251358 ESYTEEIVS(ph)EAES(ph)HVSGISR ddPTM_KYSE-520_SHP099_60min_R1 1 ESYTEEIVSEAESHVSGISR 20 0 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 2 ES(0.003)Y(0.002)T(0.004)EEIVS(0.913)EAES(0.728)HVS(0.35)GIS(0.001)R 58.284 0.022993 98669000.0 46927.0 46040.0 41459.0 43802.0 39750.0 33240.0 31828.0 41649.0 47942.0 48092.0 True False 44323.865763344744 43828.16929255113 44131.51347674543 47964.92891044851 42878.098853437965 33032.53683024805 35045.48485134583 41504.52933994967 39236.9413194703 47665.94229500983 0.9298854408252206 0.9194860561298401 0.9258500168445338 1.0062725417990945 0.8995542055596139 0.6930008144139058 0.7352311349358294 0.8707376240057002 0.8231651244116501 1.0 15.540671196481465 -6.012838969070892 24.412225824112845 0.8091626496165786 0.9434778232502149 0.330201922542793 0.08023724564023675 472.2072948050678 897864.1415918448 0.025573251690510102 0.026813807424635967 9.708698868520024e-07 6.012838969070892 0.13431517363363632 ESYTEEIVS(ph)EAESHVS(ph)GISR ddPTM_KYSE-520_SHP099_60min_R1 4 ESYTEEIVSEAESHVSGISR 20 0 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 2 ESYTEEIVS(0.969)EAES(0.072)HVS(0.905)GIS(0.053)R;ES(0.001)YT(0.001)EEIVS(0.991)EAES(0.009)HVS(0.998)GISR;ESYTEEIVS(1)EAESHVS(1)GISR;ESYTEEIVS(1)EAESHVS(0.974)GIS(0.026)R 167.67 4.280300000000001e-09 257535000.0 427153.0 488443.0 489033.0 573346.0 444436.0 396083.0 426231.0 525723.0 558960.0 488188.0 True False 403457.9715816055 464977.4651121101 520556.8496604659 627836.6314572389 479410.5847050702 393610.8990774716 469318.5890936898 523899.3896176712 457466.9542349321 483863.034124517 0.833826812812032 0.9609691840861997 1.0758351288445527 1.29755031316501 0.990798120324478 0.813475862626406 0.9699409874177651 1.0827431580211422 0.9454472071061495 1.0 18.88423919971818 -5.9877381768664195 24.998287353820526 0.9606543875323746 1.0518560271974806 0.08150188242843992 0.12456749119153006 599.1545585563182 1221494.2376521258 0.04200681232970807 0.04760193238919933 1.0286362452127387e-06 5.9877381768664195 0.09120163966510597 ET(ph)EKFGQGVHHAASQFGKET(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 1 ETEKFGQGVHHAASQFGKETEK 22 2 Q6UWP8 Q6UWP8 SBSN Suprabasin 2 ET(0.949)EKFGQGVHHAAS(0.056)QFGKET(0.996)EK 59.873000000000005 0.050399 907820000.0 347340.0 219490.0 267610.0 236940.0 353220.0 398400.0 209030.0 245550.0 249910.0 296190.0 True False 328072.35779487627 208945.37093879338 284860.56879113906 259458.70636139144 381016.4044531161 395913.43782102346 230160.79233620767 244698.24436180078 204532.64371842696 293565.987032333 1.1175421277899704 0.7117492494652673 0.9703459575504736 0.8838173283774016 1.2978901551396398 1.348635248324657 0.7840172312293728 0.8335374504228585 0.696717783235222 1.0 18.163325299626287 ET(ph)ERASPIKMDLAPSK ddPTM_KYSE-520_SHP099_60min_R1 1 ETERASPIKMDLAPSK 16 2 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ET(0.646)ERAS(0.354)PIKMDLAPSK 102.8 0.00054882 1629500000.0 1079300.0 1088400.0 1047200.0 925930.0 949700.0 943070.0 772120.0 885670.0 1269700.0 913000.0 True False 1019429.0774687905 1036111.6302782937 1114704.187579241 1013930.1088089937 1024435.9869461636 937183.9503159455 850173.4247650218 882597.817486932 1039154.4865322985 904911.5303032515 1.1265510973510993 1.144986659558946 1.23183775457661 1.1204742948398594 1.1320841349019581 1.0356636189638109 0.939509992186876 0.9753415532136697 1.1483492603791443 1.0 19.787417226818572 -6.225963306843996 2.770640210041151 1.0105416906761677 1.1582205937727128 0.5663658029848961 0.05786784336076252 0.2058595701448522 3.144977294354215 0.02182687615321855 0.020744412730178827 5.943423719547397e-07 6.225963306843996 0.14767890309654508 ET(ph)SSDVALASHILTALR ddPTM_KYSE-520_SHP099_60min_R1 8 ETSSDVALASHILTALR 17 0 O00273;O00273-2 O00273 DFFA DNA fragmentation factor subunit alpha 1 ET(0.771)S(0.226)S(0.003)DVALASHILTALR;ET(0.6)S(0.391)S(0.009)DVALASHILTALR;ET(0.637)S(0.35)S(0.014)DVALASHILTALR;ET(0.762)S(0.233)S(0.005)DVALASHILTALR;ET(0.333)S(0.333)S(0.333)DVALASHILTALR;ET(0.494)S(0.494)S(0.011)DVALASHILTALR;ET(0.333)S(0.333)S(0.333)DVALASHILTALR;ET(0.619)S(0.369)S(0.012)DVALASHILTALR 204.31 7.0002e-13 603526000.0 256190.0 237504.0 223720.0 219332.0 222241.0 237634.0 203929.0 243099.0 296144.0 210022.0 True False 241978.62999789655 226093.95133922782 238141.34916465604 240177.24733542954 239730.10232168352 236150.8380601434 224544.133475245 242255.7463087329 242371.71478272122 208161.36847464327 1.1624569523685306 1.086147506600241 1.1440227882325087 1.1538031724877242 1.151655103338186 1.1344604418706519 1.078702235292988 1.1637882095218968 1.164345318051871 1.0 17.66734282606467 -10.218752095905847 3.4104931113405845 0.9997065272966996 1.1361977837333475 0.6629455113264863 0.029439693038661365 10442617.055075377 17137164.473422192 33246.87834110292 0.007436595016024689 6.04293473909848e-11 10.218752095905847 0.13649125643664783 ETAIELGYLTAEQFDEWVKPK ddPTM_KYSE-520_SHP099_60min_R1 1 ETAIELGYLTAEQFDEWVKPK 21 1 P07954-2;P07954 P07954-2 FH Fumarate hydratase, mitochondrial 0 211.06 7.625499999999999e-19 235180000.0 163720.0 125580.0 96851.0 170060.0 132170.0 100370.0 108220.0 108400.0 129690.0 66742.0 False True 154638.12523227124 119546.94830057709 103094.17042707907 186222.45126959676 142571.02705556987 99743.55359963895 119159.9337254192 108023.98570075019 106141.56521885008 66150.71780449027 2.3376636016151364 1.8071904926852105 1.5584739493194297 2.815123666835798 2.1552453516368684 1.5078226950527274 1.8013399956988934 1.6329979369236352 1.60454139791126 1.0 16.013469190888774 -7.832403287045528 0.490947884452783 0.9918463826096416 2.1105562050195807 0.4756647163534705 0.3465718998627117 0.9339690623030583 0.5809220334501645 0.4219099137531705 0.22465823043868552 1.4709459436032918e-08 7.832403287045528 1.1187098224099392 ETAIQTEDSAISES(ph)PEEPLPNLKPKPNLR ddPTM_KYSE-520_SHP099_60min_R1 5 ETAIQTEDSAISESPEEPLPNLKPKPNLR 29 2 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 ETAIQT(0.002)EDS(0.004)AIS(0.054)ES(0.941)PEEPLPNLKPKPNLR;ETAIQTEDSAISES(1)PEEPLPNLKPKPNLR;ETAIQTEDSAISES(1)PEEPLPNLKPKPNLR;ETAIQTEDSAISES(1)PEEPLPNLKPKPNLR;ETAIQTEDSAISES(1)PEEPLPNLKPKPNLR 369.81 1.1929e-93 19516950000.0 7390940.0 7460770.0 7251280.0 6723270.0 6544600.0 7018500.0 6348070.0 6840910.0 8427600.0 7168880.0 True False 6980949.824726384 7102343.410355923 7718709.111258219 7362247.559375175 7059622.7863197485 6974694.938119612 6989794.866792852 6817180.479890393 6897360.282507362 7105369.300504236 0.9824893724005279 0.999574140340869 1.0863206097831477 1.036152696363398 0.9935616978865207 0.9816090681767448 0.9837342115767042 0.9594406978123725 0.9707250940521681 1.0 22.760478204599412 -5.921965331715253 3.751747122082784 0.977570613056317 1.0283471871267211 0.40088316978998007 0.02704368105009959 0.24037853573347398 6.685121620325598 0.00945671860139469 0.010748132142229104 1.1968360669385789e-06 5.921965331715253 0.050776574070404146 ETAPEEPGS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 3 ETAPEEPGSPAK 12 0 P35612 P35612 ADD2 Beta-adducin 1 ETAPEEPGS(1)PAK;ETAPEEPGS(1)PAK;ETAPEEPGS(1)PAK 285.55 1.5325e-29 1980440000.0 4621000.0 4328400.0 3209950.0 3517770.0 3507650.0 4701000.0 4229200.0 4987300.0 4427200.0 4601500.0 True False 4364663.918264876 4120457.1669391408 3416868.513101594 3852097.803143885 3783682.099201554 4671659.315252596 4656728.809014443 4970000.2203445695 3623332.0806299085 4560734.289912825 0.9570090342509963 0.9034635444675072 0.7491926290594983 0.8446222819127476 0.8296212536586681 1.0243217469575256 1.0210480402934092 1.0897368503438 0.7944624374727968 1.0 22.120834690015 -6.259585787319185 24.954060681620025 0.9937182593591372 0.8527224793621737 0.3538624328299427 0.08684092264301312 177.0768691153436 2383913.5462175934 0.029575453406068795 0.028150336648580937 5.500652539574126e-07 6.259585787319185 -0.14099577999696344 ETAVPGPLGIEDIS(ph)PNLS(ph)PDDK ddPTM_KYSE-520_SHP099_60min_R1 3 ETAVPGPLGIEDISPNLSPDDK 22 0 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 ETAVPGPLGIEDIS(1)PNLS(1)PDDK;ETAVPGPLGIEDIS(1)PNLS(1)PDDK;ETAVPGPLGIEDIS(1)PNLS(1)PDDK 172.98 6.3308e-10 188921000.0 536060.0 468410.0 426820.0 472170.0 468880.0 505160.0 492080.0 492070.0 594140.0 497490.0 True False 506323.6831908831 445906.8805022559 454333.50013614626 517044.8948369124 505778.1884377365 502007.109060412 541824.2486379998 490363.12402000173 486259.1530505633 493082.62564136327 1.026853628298699 0.9043248683164514 0.9214145388821697 1.0485968637900815 1.0257473334816043 1.01809936703294 1.0988508222800129 0.99448469388305 0.9861616040883117 1.0 18.911469893078618 -5.262901929563315 24.998739612155806 1.0272085122143724 0.9462103957845411 0.3849257752379909 0.042477945911316636 126.47583771235756 2161812.3550159996 0.011852208968754557 0.01874651146143293 5.458811156053778e-06 5.262901929563315 -0.08099811642983124 ETAVPGPLGIEDIS(ph)PNLS(ph)PDDKSFSR ddPTM_KYSE-520_SHP099_60min_R1 3 ETAVPGPLGIEDISPNLSPDDKSFSR 26 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 ETAVPGPLGIEDIS(1)PNLS(0.997)PDDKS(0.002)FS(0.001)R;ETAVPGPLGIEDIS(1)PNLS(1)PDDKSFSR;ETAVPGPLGIEDIS(1)PNLS(0.998)PDDKS(0.001)FSR 188.93 2.0559e-15 4093840000.0 2649730.0 2450040.0 2398710.0 2110210.0 2119030.0 2163340.0 1748190.0 1896680.0 3017330.0 2035970.0 True False 2502744.194794203 2332336.4008149845 2553334.6846716986 2310763.7239422263 2285785.6053685695 2149837.7926097745 1924914.105890228 1890100.859768442 2469458.9326994545 2017932.8897606933 1.2402514511228386 1.1558047409057177 1.265321903234601 1.1451142580942124 1.132736186107577 1.065366347671118 0.9539039259717421 0.9366519914309882 1.2237567191802436 1.0 20.944446764967957 -5.999940186085772 1.590695284542218 1.0238123597019033 1.2103230022169036 0.5006987842687294 0.07942741675320526 0.31373365839242184 1.6167060363047385 0.031253053234846354 0.034718077609001585 1.000137736112002e-06 5.999940186085772 0.18651064251500027 ETAVPGPLGIEDIS(ph)PNLSPDDK ddPTM_KYSE-520_SHP099_60min_R1 3 ETAVPGPLGIEDISPNLSPDDK 22 0 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ETAVPGPLGIEDIS(1)PNLSPDDK;ETAVPGPLGIEDIS(0.994)PNLS(0.006)PDDK;ETAVPGPLGIEDIS(1)PNLSPDDK 163.14 1.2449000000000001e-09 85491000.0 174353.0 202458.0 151304.0 118927.0 142134.0 222892.0 154464.0 194791.0 223401.0 200764.0 True False 164681.2915259113 192731.61378434653 161057.29793495938 130229.78632329371 153319.13716816483 221500.84835041076 170078.72854336674 194115.315485561 182837.0098809185 198985.3871520284 0.8276049507097316 0.9685716953531675 0.8093925902805553 0.6544690953803348 0.7705045046902177 1.1131513299576121 0.8547297416037066 0.9755254808598254 0.918846416301051 1.0 17.602302962203847 -6.229704747536506 24.986650874619702 0.9635634293486668 0.8068923117038419 0.43639639369980476 0.09424651583649911 730.3276983873302 575032.8176392997 0.03293018810291605 0.032927325395175365 5.892441132441735e-07 6.229704747536506 -0.1566711176448249 ETAVPGPLGIEDIS(ph)PNLSPDDKSFSR ddPTM_KYSE-520_SHP099_60min_R1 2 ETAVPGPLGIEDISPNLSPDDKSFSR 26 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ETAVPGPLGIEDIS(0.999)PNLS(0.001)PDDKSFSR;ETAVPGPLGIEDIS(0.954)PNLS(0.045)PDDKSFSR 128.43 7.234e-05 131987000.0 81729.0 115037.0 92321.0 63029.0 63783.0 82622.0 43249.0 61670.0 137815.0 58515.0 True False 77195.32944727763 109510.4498459428 98272.15937882286 69019.25720964014 68802.35922437331 82106.3254509252 47621.03098956439 61456.08116388619 112791.2700334322 57996.60262398113 1.3310319217794662 1.8882218076798365 1.694446828480055 1.1900569013865172 1.186317061888106 1.4157092266810622 0.8211003547623921 1.0596496757290157 1.944790986546407 1.0 15.823680770805344 -5.261380103988616 24.98916086056844 1.2223186999315123 1.6629323626955037 0.26434068412607015 0.3099148969226464 6.687636846239411 2818838.0957041197 0.08491858879742274 0.1358369637616474 5.477973109132283e-06 5.261380103988616 0.4406136627639914 ETAVPGPLGIEDISPNLS(ph)PDDK ddPTM_KYSE-520_SHP099_60min_R1 2 ETAVPGPLGIEDISPNLSPDDK 22 0 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ETAVPGPLGIEDISPNLS(1)PDDK;ETAVPGPLGIEDISPNLS(1)PDDK 150.48 3.3250999999999995e-07 257770000.0 438590.0 446740.0 373790.0 386080.0 408110.0 472470.0 391260.0 504990.0 541980.0 522740.0 True False 414260.53839251085 425277.9398295887 397885.10148514557 422772.9271208155 440225.9351717373 469521.13947615173 430812.3791296199 503238.30755555176 443570.0942039656 518108.9302855661 0.79956262897106 0.8208272719699856 0.767956462873248 0.815992356834683 0.8496783387406543 0.9062208968630704 0.8315092714039287 0.9712982698024176 0.8561328868805314 1.0 18.982895924976486 -7.099715780362334 0.2634659974786008 1.0168121206826184 0.7539109351695972 0.6846976330549503 0.03994913722601461 1.0887188513814308 0.27429955648054366 0.08575257876315198 0.10843534122685179 7.948482449546005e-08 7.099715780362334 -0.2629011855130212 ETAVPGPLGIEDISPNLS(ph)PDDKSFSR ddPTM_KYSE-520_SHP099_60min_R1 6 ETAVPGPLGIEDISPNLSPDDKSFSR 26 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 ETAVPGPLGIEDIS(0.001)PNLS(0.995)PDDKS(0.003)FS(0.001)R;ETAVPGPLGIEDIS(0.001)PNLS(0.997)PDDKS(0.001)FS(0.001)R;ETAVPGPLGIEDISPNLS(0.976)PDDKS(0.012)FS(0.012)R;ETAVPGPLGIEDIS(0.001)PNLS(0.996)PDDKS(0.001)FS(0.002)R;ETAVPGPLGIEDIS(0.025)PNLS(0.934)PDDKS(0.021)FS(0.021)R;ETAVPGPLGIEDISPNLS(1)PDDKSFSR 218.98 8.464099999999999e-22 5348343000.0 2275521.0 2273418.0 2229792.0 1663885.0 1904754.0 2120736.0 1619886.0 1627296.0 2619145.0 1977722.0 True False 2149293.3139913455 2164199.5868100147 2373527.960113345 1822020.1301347322 2054647.303232236 2107499.6999769215 1783639.8854438572 1621651.2899897434 2143574.291272456 1960200.9217244324 1.0964658215243386 1.104070283216743 1.2108595265965387 0.9295068224597408 1.0481819901526814 1.0751447347157184 0.9099270721058276 0.8272883009172043 1.0935482518734385 1.0 20.90257010831725 -5.606283484249274 0.9535688416400456 0.961559436530563 1.1332431861317414 0.300574155733381 0.08989032932755249 0.7149711140350961 1.3573786374542225 0.041426908770288026 0.07970656933929825 2.475805456465218e-06 5.606283484249274 0.17168374960117838 ETCSTLAES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 ETCSTLAESPR 11 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 ETCSTLAES(1)PR;ETCSTLAES(1)PR;ETCSTLAES(1)PR;ETCSTLAES(1)PR;ETCSTLAES(1)PR 142.83 8.5264e-05 3429820000.0 8423290.0 8540700.0 8786030.0 7254926.0 8548000.0 8577530.0 8104383.0 7819550.0 11156190.0 8314550.0 True False 7956033.312287684 8130391.952147941 9352391.55194504 7944431.98576697 9220678.968533028 8523994.453596806 8923653.124795925 7792425.806146696 9130507.12066375 8240889.555622021 0.9654337991776621 0.9865915441860647 1.134876458278068 0.9640260231794024 1.1188936468930815 1.034353681852422 1.0828507122399325 0.9455806625670189 1.1079516427246405 1.0 22.9743686455939 -4.5463431610419995 24.97268945691131 1.0477590535630152 0.9707231204400205 0.18700840244535422 0.061191827021768924 289.5145550571163 308123.5231327651 0.014321262112067162 0.03789474231972921 2.842214422905177e-05 4.5463431610419995 -0.07703593312299473 ETDKS(ph)PTSTEPR ddPTM_KYSE-520_SHP099_60min_R1 2 ETDKSPTSTEPR 12 1 Q6IQ19-2;Q6IQ19 Q6IQ19-2 CCSAP Centriole, cilia and spindle-associated protein 1 ETDKS(0.718)PT(0.28)S(0.001)T(0.001)EPR;ET(0.013)DKS(0.477)PT(0.477)S(0.031)T(0.002)EPR 156.2 1.2874e-05 995260000.0 742800.0 699780.0 690320.0 637590.0 712050.0 629190.0 619090.0 729080.0 877760.0 677500.0 True False 701595.4032649106 666161.5184088054 734819.1317510525 698186.3619015765 768084.2839896983 625262.9918238197 681673.6589361466 726550.9916485514 718380.9105289354 671497.8770870233 1.0448214762918553 0.9920530520492973 1.0942985180217077 1.0397447046747617 1.1438372483345285 0.9311466397127391 1.0151538555762323 1.0819855377657337 1.0698185877300044 1.0 19.357023313075583 -11.366536095894032 2.227455261569672 0.7038109432613215 1.0451999529021505 0.05769715691639532 0.05555597577362877 5664815.008357494 879804.6767826417 8468598.658311091 0.013760586848358227 4.2999549355683266e-12 11.366536095894032 0.34138900964082897 ETDLLILFK ddPTM_KYSE-520_SHP099_60min_R1 1 ETDLLILFK 9 0 P05455 P05455 SSB Lupus La protein 0 111.04 0.0070211 44105000.0 106950.0 169420.0 161020.0 151450.0 187730.0 168690.0 154960.0 160390.0 190540.0 132110.0 False True 101017.27030046079 161280.80889539534 171399.60684110931 165843.7624648972 202503.28296241286 167637.1431376218 170624.86906386013 159833.64452530746 155942.7391225204 130939.6081800248 0.7714798578102913 1.2317190431305962 1.308997401347477 1.2665668148088833 1.546539551913103 1.2802630576619924 1.303080644851734 1.220666891759422 1.1909516248751835 1.0 16.99854204140256 -4.261194861689763 3.7690101672344802 1.2842180859799948 0.7183460032850387 0.5660449217028429 0.1279350008545177 0.17937647489713282 4.916925123610973 0.03170126874475665 0.28309269891657024 5.480310161107697e-05 4.261194861689763 -0.565872082694956 ETDLLLDDSLVSIFGNR ddPTM_KYSE-520_SHP099_60min_R1 1 ETDLLLDDSLVSIFGNR 17 0 P30044-2;P30044-3;P30044;P30044-4 P30044-2 PRDX5 Peroxiredoxin-5, mitochondrial 0 124.86 0.00055811 24054000.0 16927.0 24348.0 29473.0 22994.0 28263.0 19440.0 22958.0 20922.0 33942.0 23808.0 False True 15988.025566862065 23178.285532906917 31372.876738467323 25179.342846601823 30487.1373055275 19318.66774909815 25278.818688488027 20849.4264652315 27778.988408190347 23597.07964234371 0.6775425522644929 0.9822522907162932 1.3295237043727377 1.0670533484753268 1.2919877276177831 0.8186889243036594 1.071268948176389 0.8835596091229149 1.1772214540625792 1.0 14.526320703280295 -9.22194257149368 14.189379777013887 0.9999835960746047 1.0394597126506362 0.0017128564046656747 0.193896971322233 0.0 0.0 0.18734736922387435 0.04543841129362503 5.99870394286378e-10 9.22194257149368 0.03947611657603145 ETDLLLDDSLVSIFGNRR ddPTM_KYSE-520_SHP099_60min_R1 6 ETDLLLDDSLVSIFGNRR 18 1 P30044-2;P30044-3;P30044;P30044-4 P30044-2 PRDX5 Peroxiredoxin-5, mitochondrial 0 ;;;;; 197.15 2.5609e-12 791916900.0 596226.0 349518.0 255778.0 341954.0 525606.0 303966.0 231834.5 295575.0 333727.0 204728.0 False True 563152.1552329357 332726.6306427865 272265.8591392696 374453.205347781 566968.2019109459 302068.8354435376 255270.5937466799 294549.7193127236 273130.58937305247 202914.26919597364 2.7753206192170055 1.6397399352996742 1.3417777873290742 1.845376408625733 2.794126820935253 1.4886525065016545 1.258021896430264 1.4515968762563902 1.346039341911752 1.0 17.630510795294967 -6.503483437421719 24.418335128805776 1.3118031144409175 2.014934954774591 0.4365407460433026 0.43918291348749794 644.755796372453 811737.8301621802 0.16257842313201132 0.14114985960298912 3.137014763411912e-07 6.503483437421719 0.7031318403336737 ETDLQELFRPFGS(ph)ISR ddPTM_KYSE-520_SHP099_60min_R1 5 ETDLQELFRPFGSISR 16 1 K7ENA8;O75821;K7EP16 K7ENA8 EIF3G Eukaryotic translation initiation factor 3 subunit G 1 ETDLQELFRPFGS(0.996)IS(0.004)R;ETDLQELFRPFGS(0.993)IS(0.007)R;ETDLQELFRPFGS(0.832)IS(0.168)R;ETDLQELFRPFGS(0.996)IS(0.004)R;ETDLQELFRPFGS(0.999)IS(0.001)R 220.63 3.2198000000000004e-18 524262000.0 410897.0 391199.0 440779.0 353488.0 387734.0 400516.0 338815.0 339307.0 415436.0 390324.0 True False 388103.7243071375 372405.2128383299 469192.31961133564 387083.393239957 418246.45989531855 398016.231080133 373065.72671574494 338130.0232118492 340003.2946893215 386866.03302747675 1.003199276167967 0.9626206000149934 1.212803088292871 1.0005618487898233 1.081114453554554 1.0288218584748803 0.9643279452482931 0.8740235490972501 0.8788657200751794 1.0 18.56147453965104 -6.862319220009588 2.6529257115914326 0.9081273996396553 1.052990460041565 0.41067866698851496 0.07115594282375683 0.25806703081136034 3.6725426896961784 0.0342076818705459 0.021441839621590384 1.3730323823285784e-07 6.862319220009588 0.14486306040190966 ETDLQELFRPFGSISR ddPTM_KYSE-520_SHP099_60min_R1 2 ETDLQELFRPFGSISR 16 1 K7ENA8;O75821;K7EP16 K7ENA8 EIF3G Eukaryotic translation initiation factor 3 subunit G 0 ; 205.98 4.0764e-13 860130000.0 529820.0 476560.0 363290.0 338410.0 619190.0 477950.0 348550.0 365150.0 366070.0 337590.0 False True 500429.8284300154 453665.34226885636 386708.2546845522 370572.38465332385 667916.7302908236 474966.93676345 383784.8355201891 363883.3798766504 299600.915873733 334599.21524104546 1.495609689549049 1.355847000244862 1.155735689355898 1.1075112187168858 1.9961694465112718 1.4195100141561405 1.1469986121865536 1.0875201234841767 0.8954023268043242 1.0 18.352074536163407 -6.957218167597434 2.780892683984017 0.9988056391692365 1.417395615050854 0.41794124001667465 0.2300069369703996 0.3078596741118719 4.813540485416788 0.12446362679704887 0.07340525075659002 1.1035241258927327e-07 6.957218167597434 0.4185899758816175 ETDPVKS(ph)PPLPEHQK ddPTM_KYSE-520_SHP099_60min_R1 8 ETDPVKSPPLPEHQK 15 1 Q96JM3;A0A2R8Y4S6;S4R3K0;A0A2R8Y735 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 ET(0.017)DPVKS(0.983)PPLPEHQK;ET(0.008)DPVKS(0.992)PPLPEHQK;ET(0.031)DPVKS(0.969)PPLPEHQK;ETDPVKS(1)PPLPEHQK;ETDPVKS(1)PPLPEHQK;ETDPVKS(1)PPLPEHQK;ET(0.283)DPVKS(0.717)PPLPEHQK;ET(0.003)DPVKS(0.997)PPLPEHQK 165.49 2.7485e-08 9560900000.0 8979510.0 8060980.0 7265750.0 7439400.0 8122370.0 8077820.0 7233760.0 7966930.0 9642890.0 7982100.0 True False 8481398.680090604 7673718.421022345 7734111.870611035 8146438.339262824 8761554.309036449 8027403.329064809 7965019.055494251 7939294.579325432 7891984.253475179 7911384.803979829 1.0720498231642113 0.9699589403314164 0.9775926796937476 1.0297107954052178 1.1074615286857163 1.0146647556603006 1.006779375904891 1.0035277989931122 0.9975477680601643 1.0 22.915498814587714 -6.51915495463783 24.525487294458003 1.0034668981676496 1.028485493816224 0.11691204925739329 0.03769619865994935 363.7250882590231 2395591.2741462905 0.01544753004061626 0.012261587088675786 3.025833629419416e-07 6.51915495463783 0.02501859564857445 ETDSPST(ph)PGKDQR ddPTM_KYSE-520_SHP099_60min_R1 1 ETDSPSTPGKDQR 13 1 A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;Q7Z5J4 A0A1W2PQJ7 RAI1 Retinoic acid-induced protein 1 1 ETDSPS(0.162)T(0.838)PGKDQR 187.97 8.890599999999999e-08 376430000.0 868280.0 872030.0 749700.0 632820.0 718260.0 801950.0 694280.0 881060.0 1012800.0 963330.0 True False 820114.7775267313 830136.3698562849 798026.8615624123 692963.0225357291 774782.9756596312 796944.7325817517 764464.597919831 878003.8085009492 828901.0506103114 954795.6456593991 0.8589427290070486 0.8694387889494173 0.8358090709675164 0.7257710335044064 0.8114647141321556 0.8346757090951826 0.800657817612771 0.9195724891419922 0.8681449840901373 1.0 19.864832461468236 -8.024628781911069 0.8860649276322369 0.9966081343249795 0.8179879533124632 0.5992404020853277 0.043793628198544286 0.46309620291432546 0.8202265859782284 0.04443841580646928 0.015642848951072805 9.448681679007551e-09 8.024628781911069 -0.1786201810125163 ETEAAPTS(ph)PPIVPLK ddPTM_KYSE-520_SHP099_60min_R1 4 ETEAAPTSPPIVPLK 15 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 ETEAAPT(0.039)S(0.961)PPIVPLK;ETEAAPT(0.153)S(0.847)PPIVPLK;ETEAAPT(0.351)S(0.649)PPIVPLK;ETEAAPT(0.068)S(0.932)PPIVPLK 181.26 4.7337e-09 1425470000.0 2696580.0 3666930.0 2552840.0 2098170.0 2404150.0 3684430.0 2578310.0 3401120.0 4206590.0 3854990.0 True False 2546995.331901039 3490765.178625854 2717400.151088415 2297579.4459621888 2593342.927257685 3661434.1057000873 2838950.7366807004 3389322.3085473734 3442779.29550437 3820837.787736836 0.666606507105783 0.9136125039983729 0.7112053172762379 0.6013287068444468 0.6787367251185447 0.9582804371993068 0.7430178652944782 0.8870626016696044 0.9010535088807321 1.0 21.865457579232306 -6.253378478490106 24.980469596409204 0.8811452325889559 0.7189230967983454 0.4636379396102075 0.09784210267391935 660.2565268442315 2046115.1802314972 0.033751925574347114 0.03317427657699782 5.57983711740085e-07 6.253378478490106 -0.1622221357906105 ETEEQDS(ph)DSAEQGDPAGEGK ddPTM_KYSE-520_SHP099_60min_R1 1 ETEEQDSDSAEQGDPAGEGK 20 0 H0Y626;O95361 H0Y626 TRIM16 Tripartite motif-containing protein 16 1 ET(0.046)EEQDS(0.838)DS(0.116)AEQGDPAGEGK 164.58 4.0856000000000003e-10 249600000.0 368850.0 308180.0 344510.0 344520.0 343290.0 364340.0 349860.0 342160.0 418010.0 374180.0 True False 348389.15521575476 293374.57021238905 366717.66583548964 377263.07721628516 370304.969947087 362066.018914939 385227.26310455747 340973.1268207447 342109.92117458134 370865.0563076352 0.9393960128903691 0.7910547656693564 0.9888169823454457 1.0172516142996841 0.9984897839496542 0.9762742883346839 1.038726233579172 0.9193994446807765 0.9224646953278842 1.0 18.500534814894007 -4.784550537102829 24.993654911009436 0.9833718347949105 0.8652253909288254 0.48321147737296666 0.04858162357512748 163.174055780575 176465.10682443497 0.012644120584161346 0.026346443064758866 1.6422885420400508e-05 4.784550537102829 -0.11814644386608508 ETERAS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 10 ETERASPIK 9 1 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ET(0.001)ERAS(0.999)PIK;ET(0.001)ERAS(0.999)PIK;ET(0.09)ERAS(0.91)PIK;ETERAS(1)PIK;ETERAS(1)PIK;ET(0.001)ERAS(0.999)PIK;ET(0.002)ERAS(0.998)PIK;ETERAS(1)PIK;ETERAS(1)PIK;ETERAS(1)PIK 128.28 0.0013389 46407200000.0 42050550.0 38271360.0 35532810.0 37026630.0 39192550.0 36266080.0 37341080.0 41455950.0 43240510.0 37189860.0 True False 39717922.16580683 36432746.419117495 37823311.78710619 40545629.78273778 42276780.70989457 36039729.94250069 41115880.78022156 41312148.985341474 35389123.38855217 36860386.773673266 1.0775232069505711 0.9883983758178793 1.0261235732371825 1.099978414000165 1.14694349165348 0.9777360765037139 1.1154489786739754 1.1207736163758266 0.9600855141820727 1.0 25.135567873366078 -5.220262328733923 21.84486214671562 1.0676583478956911 1.0264532670430053 0.03260260029091688 0.06381841551928154 322.2498019469945 170953.32864225042 0.01690531996224003 0.029279718733925965 6.021957293594506e-06 5.220262328733923 -0.041205080852685816 ETERAS(ph)PIKMDLAPSK ddPTM_KYSE-520_SHP099_60min_R1 27 ETERASPIKMDLAPSK 16 2 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 ET(0.036)ERAS(0.964)PIKMDLAPSK;ET(0.172)ERAS(0.828)PIKMDLAPSK;ET(0.134)ERAS(0.866)PIKMDLAPSK;ET(0.039)ERAS(0.961)PIKMDLAPSK;ET(0.134)ERAS(0.866)PIKMDLAPSK;ET(0.156)ERAS(0.844)PIKMDLAPSK;ET(0.008)ERAS(0.992)PIKMDLAPSK;ET(0.079)ERAS(0.921)PIKMDLAPSK;ET(0.179)ERAS(0.821)PIKMDLAPSK;ET(0.001)ERAS(0.999)PIKMDLAPSK;ET(0.39)ERAS(0.61)PIKMDLAPSK;ET(0.01)ERAS(0.982)PIKMDLAPS(0.009)K;ET(0.094)ERAS(0.906)PIKMDLAPSK;ETERAS(1)PIKMDLAPSK;ET(0.056)ERAS(0.943)PIKMDLAPS(0.001)K;ET(0.04)ERAS(0.96)PIKMDLAPSK;ET(0.016)ERAS(0.984)PIKMDLAPSK;ET(0.03)ERAS(0.97)PIKMDLAPSK;ET(0.169)ERAS(0.831)PIKMDLAPSK;ET(0.391)ERAS(0.609)PIKMDLAPSK;ET(0.404)ERAS(0.596)PIKMDLAPSK;ET(0.262)ERAS(0.738)PIKMDLAPSK;ET(0.31)ERAS(0.69)PIKMDLAPSK;ET(0.025)ERAS(0.975)PIKMDLAPSK;ET(0.003)ERAS(0.997)PIKMDLAPSK;ET(0.047)ERAS(0.953)PIKMDLAPSK;ET(0.363)ERAS(0.637)PIKMDLAPSK 195.18 2.0192e-12 163607710000.0 147359340.0 148713620.0 148331580.0 116754770.0 126968220.0 119433430.0 111614830.0 120727170.0 173098210.0 122666300.0 True False 139185023.6566386 141569194.47150537 157893270.9857194 127851108.23719835 136959896.56364948 118688001.66178866 122897946.27216725 120308395.62520331 141667938.51477507 121579572.01493722 1.1448060011227739 1.164415963350424 1.2986825695218 1.0515837991393044 1.126504183999123 0.9762166430986177 1.010843715234234 0.989544490339399 1.1652281396201147 1.0 26.857325604422194 -5.355104064724289 8.381497239371063 1.0437762497517302 1.1985650559693117 0.5278382621208377 0.0679830523613003 0.25212114059026414 20.472600903865928 0.019255792509685548 0.02859879106513805 4.414646518533398e-06 5.355104064724289 0.1547888062175815 ETES(ph)APGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 2 ET(0.004)ES(0.996)APGS(1)PR;ET(0.033)ES(0.967)APGS(1)PR;ETES(1)APGS(1)PR;ET(0.016)ES(0.984)APGS(1)PR;ET(0.001)ES(0.999)APGS(1)PR;ET(0.002)ES(0.998)APGS(1)PR 156.08 0.00010993 14050070000.0 4781330.0 4454040.0 4428560.0 3954720.0 4192940.0 3833040.0 3731340.0 4027540.0 4897790.0 4343990.0 True False 4516100.0935549475 4240061.232749663 4714032.063546528 4330575.399770079 4522900.523434827 3809116.575566009 4108540.2615690785 4013569.4037748994 4008474.7992384243 4305505.628173075 1.0489128301224013 0.9847998351238526 1.0948846594695547 1.0058227241495077 1.0504923031198077 0.8847083024676721 0.954252674688159 0.932194671286018 0.9310113945755804 1.0 22.037751243513707 -6.247525725345312 24.970146450868253 0.9370592790095875 1.0355691312729904 0.6167548715247476 0.037999307883410924 492.61001624348967 884063.3935055712 0.011780849384195104 0.0117227029665119 5.65554255605624e-07 6.247525725345312 0.09850985226340292 ETES(ph)APGSPR ddPTM_KYSE-520_SHP099_60min_R1 1 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 ET(0.067)ES(0.93)APGS(0.002)PR 77.67399999999999 0.017568 624190000.0 627340.0 610210.0 532160.0 505460.0 518680.0 570050.0 519360.0 584200.0 700460.0 572420.0 True False 592540.1996287152 580894.5956561168 566463.8850861056 553498.7664279102 559497.1651144963 566492.106500689 571861.9772651425 582173.5465533048 573274.1211596543 567348.804136021 1.0444019539814782 1.0238755972011326 0.9984402557237025 0.9755881432953717 0.9861608256432629 0.9984899983412558 1.0079548473465003 1.0261298557592968 1.0104438697683635 1.0 19.11387644642478 -7.004810899903137 22.98771120252442 1.0143805880915053 1.0029741632314235 0.02475280304932015 0.018938908640896437 239.76979593625902 1145694.778454284 0.00911618849100386 0.005921284149854903 9.889836232436233e-08 7.004810899903137 -0.01140642486008181 ETESAPGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 ETESAPGSPR 10 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1 Q6PKG0 LARP1 La-related protein 1 1 ETESAPGS(1)PR;ETES(0.003)APGS(0.997)PR;ETESAPGS(1)PR;ETESAPGS(1)PR;ETESAPGS(1)PR;ETESAPGS(1)PR;ETESAPGS(1)PR;ETESAPGS(1)PR 155.47 0.00013209 17425500000.0 6454500.0 6193360.0 5887910.0 5201400.0 6027660.0 6124000.0 5971520.0 5591400.0 7382070.0 5563030.0 True False 6096456.018273238 5895821.6891771145 6267454.099589088 5695739.492142065 6502002.549306018 6085777.844417543 6575179.518018989 5572004.738442574 6041672.174840891 5513745.882171854 1.1056831686758577 1.0692951425709813 1.1366962195073722 1.033007253845098 1.1792350768883986 1.103746522685294 1.1925068108922419 1.0105661119528728 1.0957473020974784 1.0 22.394601347194836 -7.883582473114914 1.309073736995737 1.0083461123000934 1.111763372958269 0.2678162550315333 0.05352979071026654 0.5424879482313214 2.0428020068964514 0.04835111846514413 0.015016133009925355 1.3074272331279867e-08 7.883582473114914 0.10341726065817558 ETFS(ph)SAEGTVDKDTTIMELR ddPTM_KYSE-520_SHP099_60min_R1 4 ETFSSAEGTVDKDTTIMELR 20 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1 P46100-2 ATRX Transcriptional regulator ATRX 1 ET(0.001)FS(0.972)S(0.027)AEGTVDKDTTIMELR;ET(0.001)FS(0.957)S(0.041)AEGTVDKDTTIMELR;ET(0.002)FS(0.869)S(0.129)AEGTVDKDTTIMELR;ET(0.001)FS(0.969)S(0.029)AEGTVDKDTTIMELR 188.51 4.2268e-13 3120490000.0 948540.0 950990.0 874156.0 874616.0 845740.0 864540.0 919790.0 1029940.0 1135030.0 984570.0 True False 895922.5953323886 905303.0129349084 930505.4944590514 957739.2416771108 912294.9263976518 859144.0851751704 1012771.3494853382 1026367.378529804 928937.1637778643 975847.4757838692 0.9180969542527337 0.9277095400669101 0.9535357907357439 0.9814435815471956 0.9348745055315458 0.8804081646929974 1.0378377508962753 1.0517702858280733 0.9519286433893542 1.0 19.896296147710796 -6.7764618624905175 24.99901677849656 1.0146983719822285 0.9357167678990369 0.5466923099658911 0.034508891084326976 192.16099606163127 319773.4972284125 0.014824573424266553 0.010039317201883882 1.673162558484779e-07 6.7764618624905175 -0.07898160408319155 ETGAAKPKLT(ph)PQEK ddPTM_KYSE-520_SHP099_60min_R1 1 ETGAAKPKLTPQEK 14 2 A0A0A0MQS2;Q8N2M8;Q8N2M8-4 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 1 ET(0.08)GAAKPKLT(0.92)PQEK 62.203 0.025751 704950000.0 837650.0 1026900.0 926360.0 643670.0 675130.0 859530.0 591810.0 637460.0 1202100.0 800940.0 True False 791183.8846861243 977566.1825916762 986074.6478284058 704844.2032735572 728258.8900357635 854165.3544435361 651635.9303090033 635248.8000442825 983828.9424749758 793844.2947218907 0.9966487004398029 1.2314331526866351 1.242151205701944 0.8878872191435059 0.9173825331715663 1.0759860089978701 0.8208611369277302 0.8002183857312102 1.2393223066743118 1.0 19.598496538151142 -5.263762262375734 24.985145357869307 0.9516425327529325 1.16421323576997 0.2962447232533917 0.1358313903070849 230.39621472102806 2478168.8877311707 0.0373641769794145 0.058569362655197285 5.44800801241264e-06 5.263762262375734 0.2125707030170374 ETGANLAICQWGFDDEANHLLLQNNLPAVR ddPTM_KYSE-520_SHP099_60min_R1 1 ETGANLAICQWGFDDEANHLLLQNNLPAVR 30 0 B7ZAR1;E9PCA1;P48643;E7ENZ3;P48643-2 B7ZAR1 CCT5 T-complex protein 1 subunit epsilon 0 269.83 4.0301999999999996e-41 239430000.0 133660.0 134190.0 77424.0 132640.0 79094.0 105300.0 97053.0 144110.0 109140.0 79594.0 False True 126245.61335539569 127743.31097670371 82414.8749227801 145246.06572032996 85318.24781670002 104642.78364094831 106864.06438600188 143610.11604552672 89322.92719550687 78888.85908319503 1.600297111944019 1.6192820185419021 1.0446959923183399 1.8411480075679076 1.081499324596958 1.3264583219614519 1.354615412466602 1.8204106094889472 1.1322628851978735 1.0 16.267533952534617 -12.045466661755313 0.3370593356971055 8.926560303914707e-12 1.4476247183373898 0.18647496108741546 0.27404915007829406 151.36598270470265 4.393989131350303 107.66772313894016 0.22043691326721346 9.006028941085789e-13 12.045466661755313 1.4476247183284632 ETGEHLVHVK ddPTM_KYSE-520_SHP099_60min_R1 10 ETGEHLVHVK 10 0 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 0 ;;;;;;;;; 146.11 0.00021400000000000002 22687890000.0 22948800.0 19769880.0 14983690.0 14606250.0 22491180.0 19943640.0 15676630.0 18926460.0 17231220.0 16177150.0 False True 21675784.3167014 18820105.289605122 15949562.632151645 15994423.608470809 24261107.908691008 19819164.34504238 17261376.749564935 18860808.527728952 14102464.811707543 16033833.036632245 1.351877886415499 1.1737745582486188 0.9947442134212032 0.997542108111554 1.5131196547489323 1.2360839918790378 1.0765595918410862 1.1763131426302096 0.8795441975407792 1.0 23.934616020577415 -7.750914924919511 23.84859839211884 0.9397721414878523 1.1850623868708077 0.30423386855979484 0.1512179511408826 138.29055253442007 313377.9533805255 0.11054198834542404 0.040695282294132114 1.774537065545495e-08 7.750914924919511 0.2452902453829554 ETGEPYRLS(ph)PEPTPLAEPILEVEVTLSK ddPTM_KYSE-520_SHP099_60min_R1 1 ETGEPYRLSPEPTPLAEPILEVEVTLSK 28 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13;C9J2Z7;C9K073;C9J556;C9JSU8;C9JWW9 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 ET(0.138)GEPY(0.017)RLS(0.822)PEPT(0.023)PLAEPILEVEVTLSK 53.818999999999996 0.046727 674960000.0 6394.5 7489.1 4831.8 6114.3 4421.0 8002.3 4847.0 7799.6 8570.6 7934.6 True False 6039.784337880279 7129.312394631722 5143.265559153345 6695.401233668669 4768.907547950925 7952.354677397534 5336.9820621614 7772.5450080403225 7014.395087244007 7864.30561702539 0.7679996978760317 0.9065406078824702 0.6540012315923631 0.8513658496655869 0.6063990618099511 1.0111960374710676 0.6786336037866328 0.9883320138542917 0.8919280898822883 1.0 12.941103672413778 -7.452389776589021 1.0092057078367518 0.9916064970158301 0.7789768385267546 0.26873111384279336 0.12224705535471657 0.6788247489257475 1.258952752705077 0.10415337736554912 0.03889139979217446 3.5286633230080727e-08 7.452389776589021 -0.21262965848907556 ETGLSHLCEFIEDCEFTVLATR ddPTM_KYSE-520_SHP099_60min_R1 4 ETGLSHLCEFIEDCEFTVLATR 22 0 Q9Y678 Q9Y678 COPG1 Coatomer subunit gamma-1 0 ;;; 234.98 1.4096e-26 102758300.0 165431.0 145399.0 109226.7 178029.0 119723.0 105317.0 97571.59999999999 111724.0 116887.0 77388.5 False True 156254.21265147734 138413.81379165145 116267.62785089911 194948.82263362955 129144.51896931224 104659.67753764245 107435.08953505011 111336.45552057755 95663.26728148447 76702.8980973419 2.0371357083949904 1.8045447724282027 1.5158179252020767 2.5416096062788194 1.6836980371382824 1.3644813968413716 1.4006653229543777 1.4515286681773485 1.2471923441547204 1.0 16.22699346825125 -6.123262542866322 3.876072459972995 1.328544182070992 1.9462877159328649 0.5859532742377944 0.2680359827071258 0.18794382605859705 4.936739042199243 0.09088062694636086 0.09169202621407829 7.529002773665497e-07 6.123262542866322 0.6177435338618729 ETHVMDYR ddPTM_KYSE-520_SHP099_60min_R1 2 ETHVMDYR 8 0 A0A087X1Z3;Q9UL46;H0YM70 A0A087X1Z3 PSME2 Proteasome activator complex subunit 2 0 ; 112.84 0.0017838 1310800000.0 1631590.0 1479500.0 945820.0 904990.0 1479920.0 1498750.0 1081360.0 1252360.0 1161470.0 1259300.0 False True 1541082.450205972 1408422.5992252252 1006789.0705655058 990999.9775048355 1596381.2844070422 1489395.7453169145 1190674.421856583 1248015.85546302 950576.3262760252 1248143.5817205736 1.2346996553726457 1.1284139259713262 0.8066292094196734 0.7939791479268242 1.2790045214240662 1.1932887907525618 0.953956291002379 0.999897667015699 0.7615921278589197 1.0 20.251352475256073 -7.304012071621718 2.3380858011400267 0.8909057175942657 1.0569681347193818 0.14184167995860542 0.16656074386085015 0.7009244526049345 7.281184709480337 0.12571068745488656 0.051396832664516445 4.965785183936794e-08 7.304012071621718 0.16606241712511605 ETIELS(ph)PTGRPK ddPTM_KYSE-520_SHP099_60min_R1 8 ETIELSPTGRPK 12 1 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-4;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9 A0A087WSW7 HELLS Lymphoid-specific helicase 1 ET(0.044)IELS(0.797)PT(0.159)GRPK;ET(0.002)IELS(0.827)PT(0.171)GRPK;ETIELS(0.5)PT(0.5)GRPK;ETIELS(0.559)PT(0.441)GRPK;ETIELS(0.92)PT(0.08)GRPK;ET(0.001)IELS(0.983)PT(0.016)GRPK;ETIELS(0.923)PT(0.077)GRPK;ETIELS(0.789)PT(0.211)GRPK 238.93 4.3094999999999995e-15 14486060000.0 14587120.0 14074220.0 12331530.0 11578460.0 12568210.0 12667290.0 11614060.0 12657000.0 14661880.0 13945580.0 True False 13777943.374897206 13398073.345365085 13126440.154945618 12678873.357209062 13557256.623667115 12588228.744417354 12788122.527102599 12613095.821166022 11999652.187916966 13822033.010697067 0.996810191687016 0.9693272570681988 0.9496750691296193 0.9172943913096361 0.9808438898369699 0.9107364115448969 0.9251983783576331 0.9125355012106083 0.8681539234228616 1.0 23.720466494028827 -3.6626497969524054 0.5472240891726885 0.9219696971768568 1.1100325623831608 0.26777562069909 0.035138989133670466 8.990340172853935 1.270798459699666 0.018152693836181445 1.238928646110379 0.00021744538915218135 3.6626497969524054 0.188062865206304 ETIELSPT(ph)GRPK ddPTM_KYSE-520_SHP099_60min_R1 3 ETIELSPTGRPK 12 1 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-4;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9 A0A087WSW7 HELLS Lymphoid-specific helicase 1 ETIELS(0.062)PT(0.938)GRPK;ETIELS(0.003)PT(0.997)GRPK;ETIELS(0.017)PT(0.983)GRPK 250.81 2.9896e-15 6669800000.0 4433820.0 4286520.0 3590430.0 3337070.0 3782930.0 3992420.0 3663220.0 3812390.0 4644450.0 3832500.0 True False 4187867.165998954 4080589.145002305 3821874.8626911147 3654224.129473321 4080625.0690726056 3967501.825866992 4033534.027181944 3799165.708908517 3801134.95705673 3798547.0316398796 1.1024918557322694 1.074249999016246 1.0061412510775638 0.9620057614228742 1.074259456335058 1.0444787948707253 1.0618623367263187 1.0001628720833213 1.0006812935038831 1.0 21.85701625338049 -4.614563876873474 4.339533280480156 1.0212852007652946 1.0966110245204916 0.4416015165381325 0.03185279164798674 0.19901030826441116 6.598082921083499 0.008786059484247462 0.026163250815594362 2.4290481466395994e-05 4.614563876873474 0.07532582375519703 ETIEQEK ddPTM_KYSE-520_SHP099_60min_R1 1 ETIEQEK 7 0 P63313;CON__P21752;P62328 P63313;P62328 TMSB10;TMSB4X Thymosin beta-10;Thymosin beta-4;Hematopoietic system regulatory peptide 0 105.81 0.029287999999999998 557150000.0 596300.0 699260.0 558290.0 417680.0 606020.0 723770.0 548060.0 674450.0 690600.0 676250.0 False True 563222.0503054202 665666.4999893417 594278.2666955832 457376.1816199293 653710.3262178736 719252.6829611498 603463.2533501508 672110.4903678136 565204.4486092813 670258.9511145387 0.8403051527605376 0.9931482434996796 0.8866398064619485 0.6823872786172901 0.9753101023579808 1.0730967214464529 0.9003434453902975 1.0027624237620343 0.8432628130805747 1.0 19.354359055548528 ETIEQEKR ddPTM_KYSE-520_SHP099_60min_R1 7 ETIEQEKR 8 1 P63313 P63313 TMSB10 Thymosin beta-10 0 ;;;;;; 173.48 0.00024431 38627000000.0 26476140.0 25079790.0 18381870.0 14968110.0 25387690.0 24333300.0 17751820.0 22645920.0 22615190.0 20539400.0 False True 25007455.735323396 23874919.2428677 19566794.75223189 16390674.674073616 27385556.76680351 24181426.84872067 19546347.206667617 22567366.589117434 18508841.578546394 20357436.895411376 1.2284186788249432 1.1727861108217006 0.9611619995561572 0.8051443194092927 1.345235989555065 1.1878424073205027 0.96015757322934 1.108556381879498 0.9091931206093209 1.0 24.279052594433885 ETIGATVSTPSVIEMEKIS(ph)PEDR ddPTM_KYSE-520_SHP099_60min_R1 2 ETIGATVSTPSVIEMEKISPEDR 23 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 ETIGATVSTPSVIEMEKIS(1)PEDR;ETIGATVSTPS(0.001)VIEMEKIS(0.999)PEDR 84.509 0.0030196999999999997 380710000.0 191296.0 200876.0 160173.0 190117.0 195722.0 200493.0 194618.0 193245.0 230710.0 221680.0 True False 180684.42954087845 191225.6154389769 170498.00786586138 208185.6625192396 211124.20789415322 199241.64881789783 214291.88672864175 192574.678198722 188818.87972581442 219716.08766443032 0.8223541182693711 0.8703305136719595 0.7759923712380173 0.9475212522316481 0.9608955363186724 0.9068141115010074 0.9753126819549377 0.8764705408956622 0.8593766698330947 1.0 17.745280982541043 -5.273254572118865 24.997231687508407 0.9291110550105818 0.8276361512427156 0.5417742820083626 0.04599769073259409 591.9076293229975 1252289.448821757 0.012982332472832094 0.019436119849343094 5.330223600657449e-06 5.273254572118865 -0.10147490376786616 ETIHLPAS(ph)SPHPPPFP ddPTM_KYSE-520_SHP099_60min_R1 4 ETIHLPASSPHPPPFP 16 0 Q5SZC3;Q5SZC6;Q9Y2T3-3 Q5SZC3 GDA 1 ETIHLPAS(0.669)S(0.331)PHPPPFP;ETIHLPAS(0.575)S(0.425)PHPPPFP;ETIHLPAS(0.717)S(0.283)PHPPPFP;ETIHLPAS(0.715)S(0.285)PHPPPFP 171.46 2.2759999999999997e-08 1222910000.0 507273.0 604530.0 461821.0 462275.0 367460.0 498706.0 377673.0 462407.0 582270.0 505530.0 True False 479133.55546634545 575487.4713819703 491590.72059972637 506209.47701195383 396377.01143859903 495593.390868402 415851.87257327925 460803.01804360526 476544.4458322134 501051.3974963885 0.9562562999732955 1.148559757057894 0.9811183504448157 1.0102945117832995 0.7910905216893563 0.9891068927154807 0.8299585125421721 0.9196721540866007 0.951088946589852 1.0 18.93459907608055 -5.548977187910619 24.888990042629235 0.9083123894885857 1.0331480207646928 0.33346190600306647 0.07662430181042296 210.02743936064087 200293.18485226878 0.021336545701524743 0.027546243936906804 2.8250283606531323e-06 5.548977187910619 0.12483563127610708 ETIHLPASS(ph)PHPPPFP ddPTM_KYSE-520_SHP099_60min_R1 2 ETIHLPASSPHPPPFP 16 0 Q5SZC3;Q5SZC6;Q9Y2T3-3 Q5SZC3 GDA 1 ETIHLPAS(0.014)S(0.986)PHPPPFP;ETIHLPAS(0.127)S(0.873)PHPPPFP 199.15 1.2103e-12 724350000.0 264020.0 349150.0 266590.0 265460.0 232820.0 282490.0 213234.0 264630.0 344940.0 320920.0 True False 249374.2842891785 332376.3099151653 283774.8179590815 290689.23858654074 251141.60943540686 280726.87512565526 234789.77368329384 263712.06029510655 282307.59122977976 318076.89847198164 0.7840062748572891 1.0449558314730714 0.8921579005652883 0.913896104945033 0.7895625574880569 0.8825754918833993 0.7381541218843836 0.8290827204426356 0.8875450954972366 1.0 18.279016068979494 -5.672018409887783 9.501601578242694 0.841585479066016 0.9177121224744217 0.0694026045383086 0.08785026227143165 0.6039994509337259 58.747025399573175 0.02461823687764291 0.03177869316652306 2.128048835371558e-06 5.672018409887783 0.07612664340840569 ETKPEPMEEDLPENKK ddPTM_KYSE-520_SHP099_60min_R1 3 ETKPEPMEEDLPENKK 16 2 P31948;P31948-2;P31948-3;F5H783 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ;; 154.12 2.752e-06 3107990000.0 3652000.0 3213010.0 2260900.0 2247760.0 3427190.0 3242830.0 2528770.0 3256890.0 2813380.0 2639670.0 False True 3449416.279918489 3058652.1767736655 2406641.2315679025 2461386.434586311 3696890.354956334 3222590.2951032897 2784402.750016896 3245592.608753838 2302541.111538345 2616284.577432186 1.3184407803618978 1.1690823709153428 0.9198698231558423 0.9407946122596865 1.4130306721391654 1.2317430309000166 1.064258366247648 1.240535007831335 0.880080527707054 1.0 21.319088042928062 -7.765703222072348 24.998005360209664 0.940040203600238 1.154401432089146 0.26003338406740795 0.14945345957547082 171.48413715647584 1005310.3808104733 0.1352760166633966 0.03975338008077621 1.7151289515385732e-08 7.765703222072348 0.21436122848890804 ETLVYLTHLDYVDTER ddPTM_KYSE-520_SHP099_60min_R1 3 ETLVYLTHLDYVDTER 16 0 O14980 O14980 XPO1 Exportin-1 0 ;; 149.0 1.491e-05 1482930000.0 799297.0 602209.0 478331.0 692217.0 632171.0 653247.0 509291.0 557476.0 451435.0 386678.0 False True 754958.4020509337 573277.975705863 509164.9816166598 758005.0955573692 681919.2611390383 649169.8431633285 560775.1044811722 555542.2458718768 369465.7837502627 383252.3337509315 1.9698729415737022 1.4958238351613682 1.3285371980214908 1.9778225174487325 1.779295782663661 1.6938444622367566 1.4632007559948987 1.4495469353956063 0.9640274858453219 1.0 18.547935051397562 -7.525166616956033 1.4275239507635813 0.9552129134225317 1.689894771304425 0.6603995881168215 0.19622168732435863 0.2681478501390804 0.9739332405535132 0.18325070726361387 0.06081208480007171 2.984237497391321e-08 7.525166616956033 0.7346818578818933 ETPAAQS(ph)PTRGPSDTK ddPTM_KYSE-520_SHP099_60min_R1 2 ETPAAQSPTRGPSDTK 16 1 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 ETPAAQS(0.97)PT(0.029)RGPS(0.002)DTK;ET(0.004)PAAQS(0.981)PT(0.015)RGPSDTK 261.06 1.2208e-22 413460000.0 387350.0 442080.0 348730.0 299500.0 320950.0 404780.0 311970.0 317140.0 433190.0 395480.0 True False 365862.9233369184 420841.8132243912 371209.69378772855 327964.3899520419 346206.93904430023 402253.6178744827 343506.97213379253 316039.9153610327 354533.6158312406 391976.35487878404 0.9333800847504156 1.0736408152847219 0.947020628074677 0.8366943206394748 0.8832342429210107 1.0262190891562244 0.8763461567471835 0.8062729076062913 0.9044770466853228 1.0 18.580407103961004 -4.99662626782354 24.893901423166085 0.8990584067924451 1.0052155502420723 0.23626749927992485 0.0703529925451949 125.14448105824755 923370.3097533335 0.018518878900593054 0.03824943209542361 1.0077985569855357e-05 4.99662626782354 0.10615714344962723 ETPAAQS(ph)PTRGPSDTKR ddPTM_KYSE-520_SHP099_60min_R1 3 ETPAAQSPTRGPSDTKR 17 2 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 ET(0.013)PAAQS(0.983)PT(0.004)RGPSDTKR;ET(0.013)PAAQS(0.795)PT(0.157)RGPS(0.033)DT(0.002)KR;ET(0.001)PAAQS(0.959)PT(0.04)RGPSDTKR 114.37 0.00010591 1904980000.0 631610.0 681160.0 702770.0 497110.0 612710.0 523190.0 478870.0 550030.0 726100.0 548450.0 True False 596573.334216681 648436.0511579947 748071.6786717566 544355.1849384292 660926.7911569815 519924.5771425231 527278.852920823 548122.0743079677 594258.5434914557 543591.159687644 1.097466953950247 1.1928745337407551 1.3761660125260506 1.0014055144885436 1.2158527219919477 0.9564625323216807 0.9699915893109919 1.0083351514085093 1.0932086236150824 1.0 19.052162468477174 -5.972578360044059 1.5460835508625845 1.006783296254495 1.1992067422806827 0.3892381385871607 0.09984344466604943 0.39037089683877924 1.9112268561264687 0.03929844962948945 0.04473181753320686 1.0651766557910209e-06 5.972578360044059 0.19242344602618777 ETPAAQSPTRGPS(ph)DTKR ddPTM_KYSE-520_SHP099_60min_R1 1 ETPAAQSPTRGPSDTKR 17 2 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 ETPAAQS(0.271)PT(0.271)RGPS(0.411)DT(0.047)KR 118.46 8.6421e-05 766620000.0 630450.0 561920.0 632090.0 502730.0 579880.0 430900.0 449750.0 449080.0 692930.0 536550.0 True False 595477.6817290831 534924.5197408841 672835.5327797579 550509.3080487136 625513.2569341284 428210.59326576116 495215.11913701077 447522.24629606 567111.379343802 531796.5844295828 1.1197470972247896 1.0058818266286091 1.2652122117359152 1.0351877469074053 1.1762265408399872 0.8052150122872068 0.9312115452343303 0.8415289969868509 1.0664065846757904 1.0 19.020514985663368 -6.251527137153827 24.99162895671117 0.9191141831100582 1.1173915624822404 0.4982160918363341 0.09585736848079895 550.3864242361258 1387683.924707956 0.030268066498819197 0.029918875323765377 5.603674013736142e-07 6.251527137153827 0.19827737937218215 ETPAAQSPTRGPSDT(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 1 ETPAAQSPTRGPSDTKR 17 2 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 ETPAAQS(0.008)PT(0.033)RGPS(0.298)DT(0.662)KR 105.06 0.0012059000000000002 562240000.0 265330.0 312150.0 318030.0 215160.0 255790.0 248540.0 237110.0 212500.0 317570.0 233740.0 True False 250611.6159777584 297153.84545329784 338530.7226659917 235608.74170978743 275919.2177539847 246988.7696687682 261079.39277059856 211762.88709787288 259907.29328822697 231669.2454469683 1.081764718032572 1.2826641917013526 1.4612674289712106 1.017004830551498 1.1910049485491405 1.0661267065995028 1.1269488630952638 0.9140742297895894 1.1218894971871554 1.0 17.821707010715166 -5.928330882522416 1.065632287912699 1.0330065207459318 1.2569016138486817 0.3283932941258213 0.12138819993466353 0.5798970442587631 1.4098150966147869 0.05749266977859937 0.07265438692340713 1.179421709353868e-06 5.928330882522416 0.2238950931027499 ETPAATEAPSST(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 ETPAATEAPSSTPK 14 0 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 ETPAATEAPS(0.001)S(0.169)T(0.83)PK 176.29 6.1104e-08 394000000.0 238830.0 369830.0 225470.0 240080.0 261220.0 342540.0 240390.0 365630.0 425040.0 348330.0 True False 225581.62380419837 352062.8116738523 240004.15696475498 262897.1310173159 281776.52786151104 340402.08080123836 264690.96718031383 364361.7148686834 347863.4503864601 345244.0671966393 0.653397538836532 1.0197505044259871 0.6951724295034931 0.7614819659379652 0.8161661694856025 0.9859751785607278 0.7666778152904647 1.0553742974565161 1.0075870476532445 1.0 18.397257097321212 -6.978451528585652 0.9099596191464514 1.0307059535066192 0.7965043561147643 0.3842250995456875 0.1133146217027824 0.6363755089090886 0.9819184085451584 0.09201177378708887 0.04519904702135629 1.0508687353137021e-07 6.978451528585652 -0.23420159739185487 ETPHS(ph)PGVEDAPIAK ddPTM_KYSE-520_SHP099_60min_R1 15 ETPHSPGVEDAPIAK 15 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 ET(0.014)PHS(0.986)PGVEDAPIAK;ET(0.016)PHS(0.984)PGVEDAPIAK;ET(0.022)PHS(0.978)PGVEDAPIAK;ETPHS(1)PGVEDAPIAK;ET(0.007)PHS(0.993)PGVEDAPIAK;ETPHS(1)PGVEDAPIAK;ETPHS(1)PGVEDAPIAK;ET(0.114)PHS(0.886)PGVEDAPIAK;ETPHS(1)PGVEDAPIAK;ETPHS(1)PGVEDAPIAK;ET(0.083)PHS(0.917)PGVEDAPIAK;ET(0.042)PHS(0.958)PGVEDAPIAK;ETPHS(1)PGVEDAPIAK;ET(0.019)PHS(0.981)PGVEDAPIAK;ET(0.022)PHS(0.978)PGVEDAPIAK 287.01 1.2222e-36 212681900000.0 60570230.0 57032340.0 52961980.0 50612390.0 49503020.0 54870580.0 52945850.0 56608170.0 67090680.0 57176860.0 True False 57210278.59814002 54292420.77911241 56375993.97296416 55422576.32843002 53398626.04034505 54528112.35701179 58298133.2197005 56411809.47071614 54908703.7304109 56670317.50332392 1.0095281113394932 0.9580398199803268 0.9948063899528621 0.9779824566040112 0.942267987773547 0.9621988151701023 1.0287243090932234 0.9954383874310813 0.9689147008429997 1.0 25.75608994958094 -6.7228546318785485 24.99971389290975 0.9978893765510047 0.9730712436371545 0.22033700412162827 0.022179779827895 250.9642408442629 162603.65758057122 0.008641814278858058 0.00669380612087922 1.8929771345941545e-07 6.7228546318785485 -0.024818132913850266 ETPQGELRPEVVEDEVPRS(ph)PVAEEPGGGGS(ph)SSSEAKLSPR ddPTM_KYSE-520_SHP099_60min_R1 1 ETPQGELRPEVVEDEVPRSPVAEEPGGGGSSSSEAKLSPR 40 3 Q7L8J4 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 2 ETPQGELRPEVVEDEVPRS(0.878)PVAEEPGGGGS(0.342)S(0.325)S(0.096)S(0.092)EAKLS(0.267)PR 72.236 0.021352 535970000.0 180190.0 156150.0 140000.0 175450.0 147320.0 143280.0 133540.0 142120.0 214460.0 164610.0 True False 170194.50150014018 148648.31961407157 149024.62400791992 192124.7152490342 158913.24586386138 142385.7363729826 147039.52642480575 141627.01889105752 175519.4700966504 163151.68346464192 1.0431673022670622 0.9111050309590369 0.9134115005329774 1.1775834068587547 0.9740214902428568 0.8727199949722878 0.9012443102168297 0.8680696140150512 1.0758054490727262 1.0 17.315854348250653 -6.004359369031048 24.99983743748916 0.9316429658112445 1.0069951814496774 0.10269791776707327 0.09069435637568393 411.7162742744137 2361103.396404716 0.029104440388821467 0.03221966821048391 9.900123926082354e-07 6.004359369031048 0.07535221563843286 ETQPWS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 ETQPWSSPK 9 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 ETQPWS(0.662)S(0.338)PK 98.943 0.0026916 351810000.0 715030.0 726450.0 656770.0 633810.0 742980.0 749730.0 708230.0 684140.0 834140.0 749660.0 True False 675365.8605230327 691550.251576319 699106.4450691547 694047.1118380748 801448.2990220727 745050.6569717763 779824.8000587112 681766.8780194772 682681.2029582199 743018.5956266541 0.9089487995296218 0.9307307456996722 0.9409003343712221 0.9340911733880936 1.0786382786909117 1.0027348727973737 1.0495360474807702 0.917563681491016 0.9187942360748774 1.0 19.503038792175975 -5.565759181325163 24.999931639204686 0.9947439302775118 0.9289548621878391 0.3178994886882416 0.04733197302283814 185.0205630229027 107868.76552377657 0.015077173721982562 0.019464562611988562 2.717945967026667e-06 5.565759181325163 -0.06578906808967278 ETQPWSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 ETQPWSSPK 9 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 ETQPWS(0.201)S(0.799)PK;ETQPWS(0.002)S(0.998)PK 126.48 0.00073435 0.0 1734670.0 1670560.0 1559710.0 1388780.0 1647900.0 1677600.0 1624120.0 1703180.0 1920200.0 1618770.0 True False 1638444.3971210879 1590303.7900383163 1660251.4022242366 1520769.2336480685 1777580.3547315816 1667129.4761258785 1788301.8994837182 1697272.0661052018 1571540.0843028408 1604428.9571840034 1.021200963610621 0.9911961404819826 1.034792718487336 0.9478570097096917 1.1079208878475262 1.0390796480337299 1.1146033555904136 1.0578667621931674 0.9795011971493663 1.0 20.61362847898911 -5.761719417452269 24.99999997596305 1.055423260133447 1.0007949615045981 0.23386593633393782 0.044535486307859154 10.574274217892272 944022.432996849 0.013250272916296142 0.015959437988563745 1.730934294443562e-06 5.761719417452269 -0.05462829862884888 ETQS(ph)PEQVK ddPTM_KYSE-520_SHP099_60min_R1 11 ETQSPEQVK 9 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 ETQS(1)PEQVK;ETQS(1)PEQVK;ETQS(1)PEQVK;ETQS(1)PEQVK;ETQS(1)PEQVK;ETQS(1)PEQVK;ETQS(1)PEQVK;ETQS(1)PEQVK;ETQS(1)PEQVK;ETQS(1)PEQVK;ETQS(1)PEQVK 232.17 4.4803e-11 59236570000.0 38887790.0 35474290.0 31629860.0 28709610.0 31074470.0 33218660.0 32099020.0 34153500.0 39232190.0 33298660.0 True False 36730606.76781252 33770051.86040513 33668771.38516532 31438162.702540975 33519853.9994514 33011330.021103762 35343902.19784613 34035029.47998686 32108613.25902777 33003659.778365493 1.1129252638790716 1.0232214271746318 1.0201526621976578 0.9525659552201926 1.0156405145536096 1.0002324058237717 1.070908573024823 1.0312501616047276 0.9728803858314998 1.0 24.976122678117207 -4.224715547386966 2.6711333657807685 1.009539876456244 1.1391384210195896 0.516639836517492 0.030257863826214548 0.4770171693169256 4.1602186633831275 0.0082193452545212 0.14293307504561523 5.9605241593913585e-05 4.224715547386966 0.12959854456334563 ETQS(ph)PEQVKSEK ddPTM_KYSE-520_SHP099_60min_R1 2 ETQSPEQVKSEK 12 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 ETQS(1)PEQVKSEK;ET(0.001)QS(0.995)PEQVKS(0.004)EK 208.05 2.2701e-10 2282000000.0 2871400.0 3365800.0 3713500.0 2033300.0 2661800.0 2536700.0 1720340.0 1886290.0 4442100.0 2238700.0 True False 2712117.7180060083 3204101.9158312003 3952878.15181008 2226544.220666061 2871268.516429713 2520867.51435891 1894248.7561004239 1879746.9002533976 3635526.61622834 2218866.859682247 1.2222985377294775 1.444026216286832 1.7814850560146507 1.0034600367977524 1.2940246972911629 1.1361058025445974 0.8537009545366278 0.8471652510608892 1.638460910966495 1.0 21.08139167235309 -5.282737394441469 24.749368067606124 1.102072888784857 1.4787456168526512 0.31509660963292585 0.2512265021466096 816.7099675541436 949056.291152036 0.07114205756946212 0.10563929818042504 5.2150995806894755e-06 5.282737394441469 0.37667272806779417 ETQSTPQS(ph)APQVR ddPTM_KYSE-520_SHP099_60min_R1 1 ETQSTPQSAPQVR 13 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 ETQSTPQS(1)APQVR 192.54 2.392e-08 0.0 204940.0 255620.0 229230.0 139980.0 177300.0 225990.0 168460.0 173230.0 213420.0 212960.0 True False 193571.5696622385 243339.63150655743 244006.53258096805 153283.65711347823 191252.501300995 224579.51258326593 185489.58081116347 172629.10556218584 174668.30788038348 211073.34008037296 0.9170820416663227 1.152867678191372 1.1560272485765124 0.7262104112964268 0.9060950152594802 1.0639880550416745 0.8787920859191992 0.8178631441396235 0.8275242520626854 1.0 17.687384842971518 -5.2440999408649756 24.94049575912259 0.8886732079221528 1.0830798619783157 0.3854056940820779 0.10790018233312866 837.9778003710815 1205318.823441843 0.030029293168290748 0.05185036262734638 5.700330798366124e-06 5.2440999408649756 0.19440665405616298 ETSFGS(ph)SENITMTSLSK ddPTM_KYSE-520_SHP099_60min_R1 9 ETSFGSSENITMTSLSK 17 0 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9;A0A087WZS7 Q9UMZ2-4 SYNRG Synergin gamma 1 ETSFGS(0.993)S(0.007)ENITMTSLSK;ETSFGS(0.997)S(0.003)ENITMTSLSK;ETSFGS(0.814)S(0.186)ENITMTSLSK;ETSFGS(0.926)S(0.074)ENITMTSLSK;ETSFGS(0.5)S(0.5)ENITMTSLSK;ETSFGS(0.93)S(0.07)ENITMTSLSK;ETSFGS(0.925)S(0.075)ENITMTSLSK;ETSFGS(0.958)S(0.042)ENITMTSLSK;ETSFGS(0.685)S(0.315)ENITMTSLSK 481.98 2.494099999999999e-156 10191280000.0 8220700.0 7563020.0 6363260.0 6213390.0 6555130.0 6839930.0 6158300.0 7122480.0 8413150.0 6904870.0 True False 7764681.383440825 7199681.166875547 6773445.921175986 6803908.717476172 7070981.437412248 6797239.459726787 6780841.06321613 7097773.779279337 6885534.0382525055 6843698.223707569 1.1345738999044166 1.0520161660452534 0.9897347457127466 0.9941859642358922 1.0332105838503132 0.9932114534478096 0.9908153225877652 1.0371254762069453 1.006113041980725 1.0 22.706344714195428 -4.369877204373735 2.648589744691399 1.006634774967156 1.1456877291153627 0.8520421107521032 0.016440737553408902 0.13070873611338416 1.3884653953113177 0.004364349279359924 0.035611954694311526 4.26700150095553e-05 4.369877204373735 0.13905295414820662 ETSVSKEDT(ph)DHEEK ddPTM_KYSE-520_SHP099_60min_R1 8 ETSVSKEDTDHEEK 14 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 ET(0.001)S(0.006)VSKEDT(0.993)DHEEK;ETSVSKEDT(1)DHEEK;ETSVSKEDT(1)DHEEK;ETSVSKEDT(1)DHEEK;ETSVSKEDT(1)DHEEK;ETSVSKEDT(1)DHEEK;ETSVS(0.011)KEDT(0.989)DHEEK;ETSVSKEDT(1)DHEEK 225.69 8.4694e-14 4695250000.0 6882860.0 6703770.0 6020510.0 7274470.0 6615540.0 6123170.0 6352750.0 7149880.0 7785850.0 6798550.0 True False 6501054.035158764 6381710.8266360825 6408601.707756593 7965833.441650835 7136145.360726358 6084953.024755412 6994947.966865255 7125078.735074529 6372135.905306365 6738320.136191862 0.9647885383541323 0.9470774165744349 0.9510681561915804 1.1821690392633524 1.0590392288424761 0.9030370925941643 1.0380848379843266 1.0573968869192438 0.9456564509426166 1.0 22.683957541554225 ETSVSKEDT(ph)DHEEKAS(ph)NEDVTK ddPTM_KYSE-520_SHP099_60min_R1 1 ETSVSKEDTDHEEKASNEDVTK 22 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 ETSVSKEDT(0.999)DHEEKAS(1)NEDVTK 146.23 3.0108e-06 760710000.0 419120.0 414350.0 428280.0 484770.0 374560.0 422970.0 412010.0 457840.0 480140.0 415910.0 True False 395870.5781049933 394444.0040479707 455887.6140722291 530842.3950485846 404035.74104512547 420330.0873372445 453659.99163010484 456251.85990065924 392958.67934442643 412225.3609730834 0.9603256266681807 0.9568649612359154 1.1059184058838063 1.2877480264569319 0.9801331487499317 1.0196609115582538 1.1005145111868238 1.1068020143730326 0.9532617751048194 1.0 18.653073739684157 -9.530188864559022 14.050491734092855 0.9999982852342241 1.0579802930382514 0.02188974839510327 0.09876196597499953 0.0 0.0 0.09979242333432385 0.024203217767280582 2.9499260935057624e-10 9.530188864559022 0.05798200780402729 ETSVSKEDTDHEEKAS(ph)NEDVTK ddPTM_KYSE-520_SHP099_60min_R1 1 ETSVSKEDTDHEEKASNEDVTK 22 2 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 ETSVSKEDT(0.01)DHEEKAS(0.99)NEDVTK 144.26 5.5083e-07 259130000.0 117610.0 174430.0 136550.0 134380.0 144560.0 128210.0 101910.0 117240.0 175810.0 104080.0 True False 111085.93885027769 166050.12097523225 145352.23148772487 147151.4347971797 155936.04956611298 127409.79383291512 112212.05734575378 116833.32180402173 143887.33580943794 103157.9321730147 1.0768530980629416 1.6096689559144695 1.4090262224716041 1.4264674727133912 1.5116244217127164 1.2350944919991766 1.087769548904428 1.132567504436507 1.394825708294662 1.0 16.65449523377742 -6.431923499892975 5.120786569145667 1.1641129531353356 1.4180523638469822 0.3658420374296245 0.15792597840628553 0.24083631402853137 10.244481579710756 0.05479252351043932 0.04760975383553015 3.698933300145882e-07 6.431923499892975 0.2539394107116466 ETTSGTSTEPVKNSS(ph)PAPPQPAPGK ddPTM_KYSE-520_SHP099_60min_R1 1 ETTSGTSTEPVKNSSPAPPQPAPGK 25 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 ETTSGTSTEPVKNS(0.098)S(0.902)PAPPQPAPGK 186.3 2.821e-15 421590000.0 174700.0 232070.0 160280.0 128300.0 148820.0 205020.0 141710.0 202290.0 239840.0 201860.0 True False 165009.04274418417 220921.00885582846 170611.90525706732 140493.5934251984 160531.28733002866 203740.39413169248 156035.42975632177 201588.30320484072 196291.101874385 200071.67744470356 0.8247496339894981 1.1042093097704313 0.8527539101791236 0.7022163017752898 0.8023688778957572 1.0183370116842394 0.7798976434305517 1.0075804120778482 0.9811038942712746 1.0 17.610157425278143 -7.2914108912024 24.069564010408733 0.9957566767071032 0.874364739632971 0.21835339055035963 0.1098181540978964 797.0806091398282 640114.9253796663 0.06281015109659686 0.030180736117875497 5.1119795617539456e-08 7.2914108912024 -0.1213919370741322 ETVFTKS(ph)PYQEFTDHLVK ddPTM_KYSE-520_SHP099_60min_R1 3 ETVFTKSPYQEFTDHLVK 18 1 P15880;H0YEN5;E9PQD7 P15880 RPS2 40S ribosomal protein S2 1 ET(0.027)VFT(0.094)KS(0.589)PY(0.289)QEFTDHLVK;ETVFT(0.005)KS(0.995)PYQEFTDHLVK;ET(0.002)VFT(0.025)KS(0.973)PYQEFTDHLVK 219.23 1.5329e-18 2203575000.0 1858940.0 1928390.0 2058200.0 1528520.0 1489290.0 1394380.0 1295730.0 1341600.0 2348570.0 1517930.0 True False 1755820.8924949826 1835747.2498276003 2190874.865236434 1673790.0812337052 1606488.6500990333 1385677.1572010017 1426715.033506168 1336946.3027317948 1922128.890631773 1504482.3211316692 1.1670598370170657 1.2201853249074766 1.4562317113759513 1.1125355597230833 1.067801613574718 0.9210325290886087 0.9483096035538625 0.8886420823650131 1.2776015135797347 1.0 20.520835723276566 -5.5708885492368925 3.232816826970301 1.0030918339573258 1.2769521328817035 0.4698827489860756 0.12354779936719551 0.20682821032793317 4.431449957449039 0.03776320735325366 0.05232848192143415 2.686033660247343e-06 5.5708885492368925 0.2738602989243777 ETVLS(ph)ALK ddPTM_KYSE-520_SHP099_60min_R1 3 ETVLSALK 8 0 A8CG34-2;A8CG34;Q96HA1-2;Q96HA1-3;Q96HA1;C9JER0;C9J370;A0A0J9YWR1;Q6PJE2-5;Q6PJE2 A8CG34-2 POM121C;POM121;POMZP3 Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121;POM121 and ZP3 fusion protein 1 ETVLS(1)ALK;ETVLS(1)ALK;ETVLS(1)ALK 114.89 0.0025524999999999996 83110000.0 308995.0 313881.0 254521.0 244016.0 233713.0 273972.0 229054.0 325852.0 346865.0 298446.0 True False 291854.43138373905 298801.6856150137 270927.83090799855 267207.2072739142 252104.88345493213 272262.03912324645 252209.01367161504 324721.6954664287 283883.0597550807 295802.0006274748 0.9866546905181104 1.0101408542916404 0.915909393220088 0.9033313050861609 0.8522757889404079 0.920419870540788 0.8526278156895916 1.0977670697886002 0.9597063547673416 1.0 18.17427228443152 -7.258481203934874 24.99998520392789 1.0215525327173778 0.9202367845785886 0.3904108498454878 0.05664488523260488 277.8117467654512 2347855.202037653 0.029417996226014848 0.016056093863733585 5.5146606906271544e-08 7.258481203934874 -0.10131574813878919 ETVNS(ph)PAIYK ddPTM_KYSE-520_SHP099_60min_R1 2 ETVNSPAIYK 10 0 Q9Y3A2 Q9Y3A2 UTP11L Probable U3 small nucleolar RNA-associated protein 11 1 ETVNS(1)PAIYK;ETVNS(1)PAIYK 145.0 0.00020179 398040000.0 1299770.0 1315440.0 1066260.0 1054150.0 1065410.0 1192740.0 1003250.0 1189910.0 1407700.0 1103520.0 True False 1227669.1670727413 1252244.2878843064 1134992.8256763206 1154336.0990582465 1149251.705646323 1185295.6672355605 1104668.300776444 1185782.4799370815 1152097.165229201 1093743.671325568 1.1224468760444224 1.1449156879386948 1.0377137307690754 1.0553991116211379 1.0507504964609136 1.083705166311075 1.0099882904352129 1.0841502547849868 1.053352074561411 1.0 20.06084323849896 -4.760864353114771 24.999999997325656 1.0503275204829243 1.1336813049604224 0.6353248111571517 0.026200650805584914 8.530646138333575 370793.7660111848 0.006329890583409364 0.014823048569092626 1.7343456160665982e-05 4.760864353114771 0.08335378447749808 ETVQTT(ph)QSPTPVEK ddPTM_KYSE-520_SHP099_60min_R1 1 ETVQTTQSPTPVEK 14 0 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 ETVQT(0.037)T(0.614)QS(0.337)PT(0.012)PVEK 140.22 0.040338 0.0 222020.0 256810.0 183110.0 190870.0 180450.0 292180.0 215260.0 222030.0 243060.0 235820.0 True False 209704.10801410294 244472.46212033104 194913.56358635874 209010.22741284195 194650.38837994673 290356.3962413324 237020.5815351481 221259.82975219138 198926.43104397904 233730.81826518348 0.8972034991816072 1.045957327899141 0.8339232499721798 0.8942347824055691 0.8327972743376214 1.2422683426877126 1.0140750085691832 0.9466437990267808 0.8510920062680117 1.0 17.83448844572924 ETVS(ph)PPCFDEYK ddPTM_KYSE-520_SHP099_60min_R1 6 ETVSPPCFDEYK 12 0 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 ETVS(1)PPCFDEYK;ET(0.003)VS(0.997)PPCFDEYK;ETVS(1)PPCFDEYK;ETVS(1)PPCFDEYK;ETVS(1)PPCFDEYK;ETVS(1)PPCFDEYK 198.37 4.5057e-08 264790000.0 2253240.0 2043500.0 2123380.0 1766130.0 2059780.0 2118700.0 2006100.0 2316210.0 2663720.0 2379970.0 True False 2128248.2854774226 1945327.1926439682 2260256.4723281236 1933982.4641936515 2221872.9674549573 2105476.40740814 2208896.1656492646 2308175.6081174803 2180055.594916765 2358885.3173886403 0.9022262633070521 0.8246806991013477 0.9581883678984013 0.8198713392029717 0.9419164853315718 0.8925726027829823 0.936415242134188 0.9785026813735492 0.9241888865246551 1.0 21.169673849683434 -7.079238180021963 0.43524995653438486 0.9973155931829847 0.8691587917821925 0.41269055047714176 0.043475030912336676 0.9597939095497868 0.4461870773031527 0.04442501135548808 0.03878043096832471 8.332240943933504e-08 7.079238180021963 -0.12815680140079222 ETVSEAPPLLFS(ph)DEEEKEAQLGVK ddPTM_KYSE-520_SHP099_60min_R1 12 ETVSEAPPLLFSDEEEKEAQLGVK 24 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK;ETVSEAPPLLFS(1)DEEEKEAQLGVK 281.63 2.0984999999999998e-48 22332000000.0 8171830.0 7777650.0 6950439.0 6934643.0 7602836.0 8711980.0 8144260.0 9420790.0 10689390.0 9399830.0 True False 7718522.299760764 7404000.019509337 7398475.419035594 7593709.385743552 8201135.938980547 8657605.301275102 8967561.281117931 9388111.478318913 8748466.233593363 9316554.819157086 0.8284738779070584 0.7947143727727469 0.7941213852810206 0.8150769821188678 0.8802756059693903 0.9292711167730131 0.9625404943336414 1.0076805922952001 0.9390237489511042 1.0 23.151365126757486 -6.165980486891048 1.32677678738934 0.9803968713031779 0.8017670546440077 0.9339454172501852 0.020344486482929344 0.09549081862533035 0.34258982468874727 0.009055330391339935 0.008857226603313244 6.82369352713113e-07 6.165980486891048 -0.17862981665917022 ETVVEVPQVTWEDIGGLEDVKR ddPTM_KYSE-520_SHP099_60min_R1 4 ETVVEVPQVTWEDIGGLEDVKR 22 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ;;; 226.08 1.7633e-19 649610000.0 942700.0 580317.0 427422.0 634511.0 747680.0 683247.0 490541.0 558243.0 561738.0 446760.0 False True 890406.5517741402 552437.7002464246 454974.3060193806 694814.7346673114 806518.1622827292 678982.6020353943 540129.6714988067 556306.5853278959 459740.5394626131 442802.05397402076 2.0108455771218723 1.2475951619656132 1.0274891499172538 1.5691316885988886 1.8213966151341467 1.5333772640432022 1.219799381351777 1.2563324409523504 1.038252951486052 1.0 18.756302388632296 -7.173587348315852 1.56079336603967 1.05062681280311 1.5090231791894724 0.36749296492885797 0.26322756346095316 0.5354087164272376 2.4037547872346656 0.21185591161257852 0.0879618078669679 6.70521413226061e-08 7.173587348315852 0.4583963663863624 ETVYCLNDDDETEVLKEDIIQGFR ddPTM_KYSE-520_SHP099_60min_R1 10 ETVYCLNDDDETEVLKEDIIQGFR 24 1 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 0 ;;;;;;;;; 350.88 3.963799999999999e-73 3283472000.0 1610802.0 1383805.0 911109.0 1918582.0 1298751.0 1100046.0 1134010.0 1383021.0 1182864.0 908978.0 False True 1521447.6020058212 1317324.9306663477 969840.543965942 2100923.4564372906 1400955.3148176463 1093180.2048726538 1248646.797671066 1378223.6229505297 968085.7151748773 900925.1620941828 1.6887613600104654 1.4621912963383683 1.0764940138996304 2.331962237078311 1.5550185229161024 1.2133973507095506 1.385960621599924 1.5297870244259535 1.0745462063958577 1.0 19.781047743894256 -6.179375404180313 5.798363706370005 1.2836420282596266 1.6269126097808033 0.2575401058491812 0.32149936896588355 0.3892962249431962 21.54506429541865 0.10913413247950503 0.10899860108212543 6.616443310386524e-07 6.179375404180313 0.34327058152117673 EVAATEEDVTRLPS(ph)PT(ph)SPFSSLSQDQAATSK ddPTM_KYSE-520_SHP099_60min_R1 1 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 2 EVAATEEDVT(0.001)RLPS(0.995)PT(0.547)S(0.456)PFS(0.001)SLSQDQAATSK 190.22 2.1055e-15 1105800000.0 512090.0 427070.0 477440.0 419640.0 488850.0 473200.0 412540.0 443230.0 660800.0 501780.0 True False 483683.3468738934 406552.91615486064 508216.5463310091 459522.45943063305 527319.7138239784 470246.5832753728 454243.5692024071 441692.5385806601 540815.3774124151 497334.6195789328 0.9725511312351486 0.8174635349115003 1.0218804931804053 0.9239703840036043 1.0602915885293336 0.9455335799335787 0.9133560209160411 0.8881194294389119 1.0874275711397192 1.0 18.92385733541148 -1.0000000000000002 0.21292181447607503 0.9903874558304885 0.6030897287024323 0.0699998354347311 0.07529206433817738 156.22075755767776 1.9589660115683687 0.12386744155317597 20.58567516061129 0.09999999999999995 1.0000000000000002 -0.3872977271280562 EVAATEEDVTRLPS(ph)PTS(ph)PFSSLSQDQAATSK ddPTM_KYSE-520_SHP099_60min_R1 9 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 2 EVAAT(0.002)EEDVT(0.002)RLPS(0.985)PT(0.098)S(0.857)PFS(0.035)S(0.014)LS(0.006)QDQAATSK;EVAATEEDVT(0.001)RLPS(0.979)PT(0.086)S(0.921)PFS(0.005)S(0.006)LS(0.001)QDQAATSK;EVAATEEDVTRLPS(0.989)PT(0.047)S(0.865)PFS(0.09)S(0.009)LSQDQAATSK;EVAATEEDVTRLPS(0.792)PT(0.243)S(0.961)PFS(0.003)S(0.001)LSQDQAATSK;EVAATEEDVTRLPS(0.945)PT(0.06)S(0.974)PFS(0.017)S(0.004)LSQDQAATSK;EVAATEEDVT(0.001)RLPS(0.737)PT(0.478)S(0.784)PFSSLSQDQAATSK;EVAATEEDVTRLPS(0.972)PT(0.303)S(0.725)PFS(0.001)SLSQDQAATSK;EVAATEEDVTRLPS(0.685)PT(0.482)S(0.833)PFSSLSQDQAATSK;EVAATEEDVT(0.001)RLPS(0.857)PT(0.508)S(0.529)PFS(0.091)S(0.014)LS(0.001)QDQAATSK 297.0 3.9008999999999993e-53 23437180000.0 7223700.0 7085810.0 6435790.0 6517990.0 6556190.0 6756740.0 6533070.0 7082130.0 9073170.0 7353670.0 True False 6822986.960911059 6745397.051582354 6850651.321028084 7137457.809894851 7072124.853381677 6714568.679374555 7193496.4722188525 7057563.744011567 7425711.044002714 7288522.204868682 0.936127622188398 0.9254821295703094 0.9399232283948996 0.9792736592236873 0.9703098453425232 0.9212524145003318 0.9869622771285032 0.9683120316622159 1.0188225864280678 1.0 22.79719489775403 -6.590557487560086 0.351763474098418 1.009734302244652 0.924841397458694 0.5385276113242632 0.021248459820660683 1.3170417513451191 0.3840247088789808 0.026943299349059337 0.040585185982355186 2.567098378805479e-07 6.590557487560086 -0.08489290478595812 EVAATEEDVTRLPS(ph)PTSPFSSLSQDQAATSK ddPTM_KYSE-520_SHP099_60min_R1 14 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 EVAATEEDVT(0.001)RLPS(0.929)PT(0.056)S(0.01)PFS(0.002)S(0.001)LS(0.001)QDQAATSK;EVAATEEDVT(0.01)RLPS(0.884)PT(0.032)S(0.043)PFS(0.014)S(0.014)LS(0.003)QDQAATSK;EVAATEEDVT(0.003)RLPS(0.965)PT(0.026)S(0.006)PFSSLSQDQAATSK;EVAATEEDVT(0.072)RLPS(0.647)PT(0.232)S(0.047)PFSSLS(0.001)QDQAATSK;EVAATEEDVTRLPS(0.986)PT(0.013)SPFSSLSQDQAATSK;EVAATEEDVT(0.006)RLPS(0.896)PT(0.031)S(0.064)PFS(0.002)SLSQDQAATSK;EVAATEEDVTRLPS(0.943)PT(0.051)S(0.007)PFSSLSQDQAATSK;EVAATEEDVTRLPS(0.888)PT(0.103)S(0.008)PFSSLSQDQAATSK;EVAATEEDVT(0.002)RLPS(0.991)PT(0.005)S(0.001)PFSSLSQDQAATSK;EVAATEEDVTRLPS(0.997)PT(0.003)SPFSSLSQDQAATSK;EVAATEEDVTRLPS(0.67)PT(0.165)S(0.165)PFSSLSQDQAATSK;EVAATEEDVT(0.001)RLPS(0.974)PT(0.024)S(0.001)PFSSLSQDQAATSK;EVAATEEDVTRLPS(0.943)PT(0.046)S(0.01)PFSSLSQDQAATSK;EVAATEEDVTRLPS(0.998)PT(0.001)SPFSSLSQDQAATSK 430.99 3.667599999999999e-141 43022110000.0 10571970.0 14160920.0 8912720.0 7903580.0 8435670.0 11308680.0 7685690.0 9950500.0 12075210.0 10612120.0 True False 9985521.749400297 13480608.147225741 9487248.192056209 8654733.866902022 9099509.236603308 11238098.333378134 8462634.550306026 9915984.037964154 9882656.25527265 10518104.872904431 0.9493651061726799 1.2816575143639213 0.9019921655750172 0.8228415642819251 0.8651282095545986 1.068452774446894 0.8045778828566847 0.942753866574254 0.9395852555845157 1.0 23.3263714508989 -4.7966444888142545 24.996588955229637 0.9121338020615933 1.115511459139962 0.3586447828711433 0.10531390437654199 149.01539830318399 105804.62380972487 0.026094604392932416 0.054323692533348775 1.597186060382116e-05 4.7966444888142545 0.20337765707836863 EVAATEEDVTRLPSPT(ph)S(ph)PFSSLSQDQAATSK ddPTM_KYSE-520_SHP099_60min_R1 3 EVAATEEDVTRLPSPTSPFSSLSQDQAATSK 31 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 2 EVAATEEDVTRLPS(0.26)PT(0.786)S(0.954)PFSSLSQDQAATSK;EVAATEEDVTRLPS(0.296)PT(0.776)S(0.927)PFS(0.001)SLSQDQAATSK;EVAATEEDVTRLPS(0.433)PT(0.735)S(0.832)PFSSLSQDQAATSK 244.49 3.1003e-31 9006500000.0 1753090.0 1615550.0 1504390.0 1520930.0 1659030.0 1664830.0 1620300.0 1679340.0 2204440.0 1784520.0 True False 1655842.6030017263 1537936.553010012 1601365.3865091044 1665478.7299157213 1789586.2224105468 1654439.1784326665 1784095.7366041106 1673514.761500902 1804169.265410143 1768710.5411355535 0.9361863145445137 0.8695241630790649 0.9053857877055397 0.9416344230336554 1.0118027686212525 0.9353928412562509 1.0086985377826037 0.9461778638049313 1.0200477825228678 1.0 20.754266531972267 -5.470454592997832 3.245246969784907 0.9828299278720367 0.9006417310948123 0.6021452650443531 0.030294149281547465 0.16243939454843465 3.402553290449223 0.008451355511098916 0.012604729812730775 3.384896602903483e-06 5.470454592997832 -0.08218819677722444 EVADIFNAPS(ph)DDEEFVGFR ddPTM_KYSE-520_SHP099_60min_R1 11 EVADIFNAPSDDEEFVGFR 19 0 Q96GN5-2;Q96GN5;Q96GN5-5 Q96GN5-2 CDCA7L Cell division cycle-associated 7-like protein 1 EVADIFNAPS(1)DDEEFVGFR;EVADIFNAPS(1)DDEEFVGFR;EVADIFNAPS(1)DDEEFVGFR;EVADIFNAPS(1)DDEEFVGFR;EVADIFNAPS(1)DDEEFVGFR;EVADIFNAPS(1)DDEEFVGFR;EVADIFNAPS(1)DDEEFVGFR;EVADIFNAPS(1)DDEEFVGFR;EVADIFNAPS(1)DDEEFVGFR;EVADIFNAPS(1)DDEEFVGFR;EVADIFNAPS(1)DDEEFVGFR 268.25 2.8776e-35 1313316000.0 1238637.0 1149988.0 1034702.0 1046855.0 1134713.0 1197061.0 1202568.0 1196335.0 1199798.0 1197504.0 True False 1169927.3364483565 1094740.8503128213 1101400.5465017357 1146347.7844515662 1224008.4574661916 1189589.6982717693 1324135.3093726651 1192185.1931116874 981944.9276462784 1186895.0462040128 0.9857041194923483 0.9223569125291039 0.9279679361914013 0.9658375339233852 1.0312693286410426 1.0022703372773984 1.1156296536981773 1.0044571311714492 0.8273224585331145 1.0 20.178760936472944 -3.8737717840804353 18.97262126509882 0.9807890429828736 2.2076732536509764 0.0 0.07218092422687986 10047.848125050636 2263621.0253071 0.018331273561893516 267575.43685647123 0.00013372980641192475 3.8737717840804353 1.2268842106681028 EVAENQQNQS(ph)SDPEEEKGSQPPPAAESQSSLRR ddPTM_KYSE-520_SHP099_60min_R1 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3;E9PQN0;E9PRG1;E9PIG0;E9PQD2;E9PJP4 O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQS(0.564)S(0.436)DPEEEKGSQPPPAAESQSSLRR 112.9 0.00015572 1386500000.0 358530.0 375610.0 368140.0 282340.0 280990.0 274680.0 225340.0 413850.0 568170.0 301090.0 True False 338641.6261881643 357565.13179789565 391870.8934448263 309173.50871138327 303102.3143855987 272965.6202326273 248119.56630646784 412414.4509433164 465004.6504001386 298422.5768444757 1.1347721401274842 1.1981839161728114 1.3131409077304885 1.0360258663422455 1.0156815800956034 0.9146949373568496 0.831436980841354 1.3819814013543892 1.5582086828587298 1.0 18.186997159726516 -10.492235346221845 8.371865477050337 0.9999920063480695 1.1424566126039297 0.04388967498179108 0.2094105119378311 3.394183957535149e-05 2.0584045555628083e-06 0.22026687755589225 0.05341956893167568 3.219323751824858e-11 10.492235346221845 0.14246460625586022 EVAENQQNQSSDPEEEKGSQPPPAAES(ph)QSSLRR ddPTM_KYSE-520_SHP099_60min_R1 2 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3;E9PQN0;E9PRG1;E9PIG0;E9PQD2;E9PJP4 O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQSSDPEEEKGS(0.001)QPPPAAES(0.333)QS(0.333)S(0.333)LRR;EVAENQQNQSSDPEEEKGSQPPPAAES(0.333)QS(0.333)S(0.333)LRR 150.99 4.6813999999999996e-07 2566940000.0 741580.0 627970.0 653340.0 529380.0 507680.0 546680.0 537400.0 549550.0 650700.0 525500.0 True False 700443.0790969202 597801.3785978127 695455.3417809607 579692.1160360993 547631.5276959346 543267.9673393508 591725.636518576 547643.7393159342 532549.2828121346 520844.4788328138 1.3448219335387366 1.1477540857060737 1.3352456828177213 1.112985045622755 1.051430033247447 1.0430521766435672 1.1360889105412104 1.051453479056121 1.0224727427380063 1.0 18.99049313079653 -5.429461810355658 4.605742121052447 1.0587586607015762 1.262009226874676 0.7320956576959012 0.06057887015956741 0.1184413710076442 4.237098918373861 0.01660228628338126 0.02480786501485332 3.7199593115091196e-06 5.429461810355658 0.2032505661730999 EVAENQQNQSSDPEEEKGSQPPPAAESQSS(ph)LRR ddPTM_KYSE-520_SHP099_60min_R1 1 EVAENQQNQSSDPEEEKGSQPPPAAESQSSLRR 33 2 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3;E9PQN0;E9PRG1;E9PIG0;E9PQD2;E9PJP4 O43491 EPB41L2 Band 4.1-like protein 2 1 EVAENQQNQSSDPEEEKGSQPPPAAES(0.3)QS(0.202)S(0.498)LRR 173.43 1.5388999999999997e-10 1968100000.0 548780.0 456380.0 469740.0 419840.0 397230.0 471370.0 449300.0 430090.0 543730.0 392830.0 True False 518338.0794341919 434454.8197596545 500020.1920105743 459741.46737050166 428489.74107047013 468428.00498417637 494719.62874543347 428598.1181737606 445002.33831787575 389349.83181711496 1.3312913916389342 1.115846943433961 1.2842440169473177 1.1807927724659992 1.1005263289075722 1.2031031394003682 1.2706301334112626 1.100804682959466 1.142937024631622 1.0 18.570707477520664 -13.999999999954932 0.11632704685323252 0.3628962814747384 1.2907631565913933 0.4666461398861581 0.07023669432994531 148.6729988600534 1.1301025173109245 22.18688730943318 0.7390857061328189 1.0000000001037728e-14 13.999999999954932 0.9278668751166549 EVAES(ph)PRPR ddPTM_KYSE-520_SHP099_60min_R1 2 EVAESPRPR 9 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 EVAES(1)PRPR;EVAES(1)PRPR 108.9 0.00069282 684720000.0 374740.0 381460.0 392720.0 381770.0 342810.0 405970.0 355360.0 325860.0 407900.0 326980.0 True False 353952.4251743309 363134.08901686704 418035.3595742172 418053.30601666414 369787.1966779134 403436.1906430751 391283.25677938474 324729.6677162957 333835.64232222165 324083.21158659057 1.0921652604018326 1.1204964528680703 1.289901311233223 1.2899566872656902 1.1410254633912482 1.2448537172536704 1.2073542929416423 1.0019947226718111 1.0300923663644495 1.0 18.306004761405106 -7.260630998885336 24.684441428050484 1.0120326451223989 1.201672819952504 0.6459723277203946 0.06348739008594802 40.411283949350334 1234037.8301806033 0.03432650387470385 0.018298724313592488 5.4874300995026466e-08 7.260630998885336 0.1896401748301051 EVAPVTNFS(ph)DS(ph)DDTMVAK ddPTM_KYSE-520_SHP099_60min_R1 5 EVAPVTNFSDSDDTMVAK 18 0 Q9NWQ4-4;Q9NWQ4;G3V5D0;G3V290;G3V553;Q9NWQ4-1 Q9NWQ4-4 GPATCH2L G patch domain-containing protein 2-like 2 EVAPVTNFS(1)DS(0.99)DDT(0.011)MVAK;EVAPVTNFS(1)DS(1)DDTMVAK;EVAPVTNFS(1)DS(1)DDTMVAK;EVAPVTNFS(1)DS(1)DDTMVAK;EVAPVTNFS(1)DS(1)DDTMVAK 325.35 1.0891e-44 712950000.0 2225340.0 2148520.0 1968590.0 2008910.0 2195080.0 2135540.0 1974770.0 2147440.0 2490880.0 2140030.0 True False 2101895.9540946907 2045301.8742057306 2095488.4612553662 2199836.202399182 2367820.3077032627 2122211.30272166 2174399.023497931 2139991.031856263 2038598.9819749298 2121070.9991181446 0.9909597344778057 0.9642778931285583 0.9879388583062921 1.0371346377909014 1.1163324135249157 1.0005376074652803 1.0251420270240639 1.0089200374461698 0.961117747978496 1.0 21.016361482677933 -5.13643672487431 4.968935355676522 1.024790777805391 0.9774493919032504 0.18935909487831415 0.03797136571907075 0.362506829065137 13.094524678361667 0.011051866028305933 0.01974807156776947 7.304042223588219e-06 5.13643672487431 -0.047341385902140654 EVDATS(ph)PAPSTSSTVK ddPTM_KYSE-520_SHP099_60min_R1 3 EVDATSPAPSTSSTVK 16 0 Q16666-3;Q16666-2;Q16666;H3BM18;X6RHM1;Q16666-6 Q16666-3 IFI16 Gamma-interferon-inducible protein 16 1 EVDATS(1)PAPSTSSTVK;EVDAT(0.001)S(0.908)PAPS(0.069)T(0.017)S(0.004)S(0.001)TVK;EVDATS(0.998)PAPS(0.001)TSSTVK 274.17 1.0062999999999998e-29 2363720000.0 1993680.0 2775750.0 1731080.0 1595280.0 1714540.0 2278060.0 1837970.0 2542860.0 2791490.0 2664080.0 True False 1883086.5960974505 2642398.803514307 1842668.1866259298 1746894.9315615783 1849464.5436018514 2263841.782536548 2023769.9444585936 2534039.4121679873 2284625.7837363537 2640478.3238228797 0.7131611644405098 1.0007273226498776 0.6978539342667726 0.6615827578665471 0.7004278455595121 0.8573604873449452 0.7664406581943014 0.9596895340156437 0.8652317889240146 1.0 21.332367867430516 -7.32002620089288 1.2008481765068275 0.965099007972446 0.7652979145864611 0.3724786807930003 0.09911945245194595 0.5685022571617888 1.4395816452629182 0.0895587208344175 0.03358291160810814 4.786012175429114e-08 7.32002620089288 -0.19980109338598484 EVDDLEQWIAER ddPTM_KYSE-520_SHP099_60min_R1 2 EVDDLEQWIAER 12 0 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ; 152.85 0.00010574 111060000.0 138386.0 196103.0 222786.0 84168.0 156044.0 167565.0 130506.0 132106.0 182229.0 175803.0 False True 130709.45271434849 186681.91752339603 237147.1420302035 92167.301413968 168323.7750310914 166519.16467991925 143698.82009581925 131647.7551197721 149140.80721926002 174245.5221926644 0.7501452609486413 1.0713728259655397 1.3609941824960552 0.528950760135219 0.9660149248769488 0.9556582148251589 0.8246916092163937 0.755530205098805 0.8559233278566211 1.0 17.41076205624963 -5.259551882475556 24.999853194231232 0.8400917608280166 1.0618909363103801 0.22685169312259656 0.1860021986454995 256.44842724886513 3396630.32801953 0.051081573968944013 0.08300811243532664 5.501081985611415e-06 5.259551882475556 0.2217991754823635 EVDEDS(ph)EPER ddPTM_KYSE-520_SHP099_60min_R1 4 EVDEDSEPER 10 0 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EVDEDS(1)EPER;EVDEDS(1)EPER;EVDEDS(1)EPER;EVDEDS(1)EPER 152.23 0.00010549 3445810000.0 3171800.0 2882210.0 2636630.0 2785160.0 2895230.0 2781470.0 2871010.0 2932350.0 3302860.0 2804140.0 True False 2995853.9311734564 2743744.3053145893 2806591.3885571603 3049860.7690111087 3123068.1293946947 2764109.81399609 3161239.709157422 2922178.362265638 2703143.8823250136 2779297.5011879094 1.0779176859954676 0.9872078480773921 1.0098204266932866 1.0973495164542684 1.1236897554363479 0.9945354222837505 1.1374240101343112 1.0514089841107903 0.9725996879318077 1.0 21.40628884089621 -10.023900821346082 11.65353867905599 1.0000006768752268 1.0516851757395895 0.06820778814047346 0.0554435314596785 0.0 0.0 0.05415441928554884 0.013134375929900235 9.464532756578615e-11 10.023900821346082 0.05168449886436277 EVDEDS(ph)EPEREVR ddPTM_KYSE-520_SHP099_60min_R1 2 EVDEDSEPEREVR 13 1 F8WC91;B9A018;Q53GS9-3;Q53GS9 F8WC91 USP39 U4/U6.U5 tri-snRNP-associated protein 2 1 EVDEDS(1)EPEREVR;EVDEDS(1)EPEREVR 71.513 0.012749 1223820000.0 1118320.0 1294760.0 1359200.0 1034960.0 1029640.0 982450.0 832590.0 962490.0 1562600.0 1019600.0 True False 1056284.5602843484 1232557.786125619 1446816.206796894 1133322.2872279303 1110666.8101497823 976318.1651286759 916756.3224953498 959151.3468368538 1278871.2299404342 1010567.1372367966 1.0452393723909899 1.2196693724830727 1.4316873698791923 1.1214715435203884 1.09905296662099 0.9661091570800848 0.9071701312216083 0.9491218460353564 1.265498533266443 1.0 19.94673373996919 -5.746540124193199 2.515306017315811 1.0116712701899637 1.232734579620791 0.3253876580671673 0.12805113712522764 0.3164078506163224 4.100912022932629 0.043087699783740455 0.05505452498303014 1.7925029364996078e-06 5.746540124193199 0.2210633094308272 EVDEQMLNVQNK ddPTM_KYSE-520_SHP099_60min_R1 1 EVDEQMLNVQNK 12 0 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371 Q5JP53;P68371 TUBB;TUBB2B;TUBB2A;TUBB4B Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain 0 208.46 1.6331e-08 0.0 201770.0 292160.0 260710.0 134840.0 242150.0 274270.0 219550.0 196990.0 236480.0 241560.0 False True 190577.41588147674 278124.19505889964 277515.78375074855 147655.15305887582 261205.82735496887 272558.17919470917 241744.25660151363 196306.68766781143 193541.1931756778 239419.9663308363 0.7959963356528598 1.161658316644239 1.1591171279644679 0.6167202983181543 1.0909943366796249 1.1384103981456655 1.0097080051688987 0.8199261351350711 0.8083753253404016 1.0 17.869183944702122 -7.252383170306008 23.473372126606183 0.8606130486767033 1.0032582785666178 0.09089851730996701 0.17075418609830173 608.1853803471821 1576404.072092066 0.08290064177503098 0.04687371292672943 5.592639551073179e-08 7.252383170306008 0.14264522988991446 EVDFDS(ph)DPMEECLR ddPTM_KYSE-520_SHP099_60min_R1 2 EVDFDSDPMEECLR 14 0 Q8N1G1 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 EVDFDS(1)DPMEECLR;EVDFDS(1)DPMEECLR 196.18 6.2169e-11 553730000.0 695040.0 701220.0 622330.0 640850.0 624060.0 647920.0 556330.0 699020.0 794590.0 726550.0 True False 656484.7456721102 667532.3386473208 662446.3875632063 701756.1913214218 673169.9715843141 643876.0909462785 612569.2656575727 696595.2627724942 650312.4859838543 720113.3322473469 0.9116408713380392 0.9269823356332952 0.9199196263952338 0.9745079835299872 0.9348111490777004 0.8941316069469991 0.8506567483563342 0.9673411553130715 0.9030696376004366 1.0 19.457864451831114 -10.444079764451407 3.213925381782577 1.0012825738431026 0.921103939634574 0.33515292216148607 0.03364344962847911 14858085.93052979 22629184.09769129 177712.40755610593 0.008646112121888679 3.596832680639989e-11 10.444079764451407 -0.08017863420852855 EVDGLLTSEPMGS(ph)PVSSK ddPTM_KYSE-520_SHP099_60min_R1 29 EVDGLLTSEPMGSPVSSK 18 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 EVDGLLT(0.005)S(0.18)EPMGS(0.807)PVS(0.006)S(0.002)K;EVDGLLT(0.01)S(0.038)EPMGS(0.953)PVSSK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTS(0.003)EPMGS(0.995)PVS(0.002)SK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(0.998)PVS(0.001)SK;EVDGLLTS(0.002)EPMGS(0.997)PVS(0.001)SK;EVDGLLTSEPMGS(0.988)PVS(0.009)S(0.003)K;EVDGLLTSEPMGS(0.998)PVS(0.001)SK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(0.999)PVS(0.001)SK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(0.999)PVSSK;EVDGLLTSEPMGS(0.999)PVS(0.001)SK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTS(0.003)EPMGS(0.964)PVS(0.027)S(0.006)K;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLT(0.033)S(0.045)EPMGS(0.922)PVSSK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(0.997)PVS(0.002)S(0.001)K;EVDGLLTSEPMGS(1)PVSSK;EVDGLLTSEPMGS(0.683)PVS(0.283)S(0.034)K 419.91 5.530099999999999e-102 59502844000.0 37993250.0 38690540.0 31865990.0 26267200.0 26986850.0 36742300.0 30835174.0 36505790.0 42694170.0 38662990.0 True False 35885688.68483385 36831788.382715486 33920122.70278672 28763626.790478326 29110561.56082773 36512977.6768358 33952294.310217835 36379159.935005434 34941984.96044156 38320465.987951025 0.9364627428099978 0.9611518918975667 0.8851698910303468 0.7506074377989657 0.7596609490599844 0.9528322982376167 0.8860094321633077 0.949340228442003 0.9118361183663124 1.0 25.19161176898131 EVDKNWLEGEHHGR ddPTM_KYSE-520_SHP099_60min_R1 4 EVDKNWLEGEHHGR 14 1 O60504-2;O60504;E5RIA0;E5RJP2;H0YB51 O60504-2 SORBS3 Vinexin 0 ;;; 182.57 4.609e-09 3343650000.0 3132290.0 3009530.0 2495470.0 2535250.0 3195680.0 2986620.0 2734360.0 2925560.0 3126430.0 1931550.0 False True 2958535.629634691 2864947.6614033733 2656331.989093175 2776199.3977492913 3447161.8350680387 2967979.396749559 3010775.793581934 2915411.915190836 2558749.1228866484 1914437.9697231597 1.5453807730644387 1.4964954240944477 1.387525754870657 1.4501380779397872 1.8006129681843497 1.5503136918971305 1.5726682405997787 1.5228552511484212 1.336553684869017 1.0 20.868489485076324 -8.086007241729417 2.130269235371627 1.0007066487973488 1.5432591099497355 0.730763620622504 0.10131295779653446 0.22991763680752042 2.2841137685861432 0.1049170974821873 0.029018525183190216 8.203378653294424e-09 8.086007241729417 0.5425524611523866 EVDKT(ph)PPPQPPLISSMDSISQK ddPTM_KYSE-520_SHP099_60min_R1 5 EVDKTPPPQPPLISSMDSISQK 22 1 Q92625;A0A3B3ISP1;A0A3B3ITU5 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 EVDKT(1)PPPQPPLISSMDSISQK;EVDKT(1)PPPQPPLISSMDSISQK;EVDKT(1)PPPQPPLISSMDSISQK;EVDKT(1)PPPQPPLISSMDSISQK;EVDKT(1)PPPQPPLISSMDSISQK 190.6 3.3150999999999997e-13 2488970000.0 910061.0 1113966.0 755475.0 744182.0 701943.0 988591.0 729829.0 941120.0 1179404.0 982550.0 True False 859578.1021683733 1060449.4012629462 804174.1273027387 814908.8335335228 757181.9205906616 982420.8368697879 803607.237764636 937855.4743790593 965253.9639553746 973845.3714123336 0.8826638472612521 1.0889299599227071 0.8257718842329901 0.8367948931683983 0.7775176047636263 1.008805777291951 0.8251897697056287 0.9630435199573014 0.991177852553225 1.0 19.893333191707157 -7.4773372064780785 8.786414687422088 0.9896171322658514 0.8950314331695407 0.19274744414931622 0.08813691145134936 0.6647975672303305 123.9277596880873 0.050168283950678065 0.023688476582332148 3.331676254357384e-08 7.4773372064780785 -0.09458569909631065 EVDPNDLYIVEPLKFS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 3 EVDPNDLYIVEPLKFSPEK 19 1 A0A087WV04;B4DYM4;Q9UBS9;Q9UBS9-2 A0A087WV04 SUCO SUN domain-containing ossification factor 1 EVDPNDLYIVEPLKFS(1)PEK;EVDPNDLYIVEPLKFS(1)PEK;EVDPNDLYIVEPLKFS(1)PEK 146.15 1.3422e-06 442460000.0 619255.0 818996.0 546966.0 689970.0 603116.0 693260.0 627839.0 807023.0 1007454.0 609046.0 True False 584903.6906957619 779650.2028219416 582224.3035365434 755544.5413529554 650577.7979393733 688933.1071882604 691307.0932381577 804223.625573585 824525.7494486186 603650.3262706177 0.9689445449476133 1.2915593165312442 0.964505903829382 1.2516261624850729 1.077739495244997 1.1412784474822106 1.1452111647302305 1.3322673583929283 1.3658996169894921 1.0 19.203353562664574 -7.122505044593376 5.962262118154567 1.260969994984954 1.123198251018872 0.11981881207773915 0.13434599887617554 0.3897490103974693 17.323042217433475 0.05936374525604066 0.03396582491253774 7.542146351370197e-08 7.122505044593376 -0.13777174396608194 EVDRPGSK ddPTM_KYSE-520_SHP099_60min_R1 6 EVDRPGSK 8 1 H7C422;P39023;H7C3M2;B5MCW2;G5E9G0;F8WCR1 H7C422 RPL3 60S ribosomal protein L3 0 ;;;;; 115.7 0.0011095 11531300000.0 9504150.0 9329700.0 5423840.0 5452500.0 9313200.0 9598000.0 6934440.0 8065280.0 8070350.0 8983650.0 False True 8976935.853446692 8881487.207834786 5773469.404850839 5970703.960646102 10046095.855140604 9538095.321802683 7635440.868812562 8037303.426130507 6604977.876967738 8904061.850173937 1.008184355016731 0.9974646804212495 0.6484085018724411 0.6705595784388523 1.1282598912926867 1.0712072178178278 0.8575233412898414 0.9026558397023603 0.7417938001900461 1.0 23.086032183413447 -4.569723186477754 24.999879698691196 0.8779101040254447 1.0055110147668813 0.09853384085889827 0.15171444407463772 268.12720661713115 143092.7097356813 0.04172065478847723 0.11038256967294108 2.6932508992362976e-05 4.569723186477754 0.12760091074143665 EVDT(ph)ITAGINAQARR ddPTM_KYSE-520_SHP099_60min_R1 1 EVDTITAGINAQARR 15 1 F8WEM1;Q96JH8-1;Q96JH8 F8WEM1 RADIL Ras-associating and dilute domain-containing protein 1 EVDT(0.5)IT(0.5)AGINAQARR 63.32 0.052071000000000006 31608000.0 6567.5 9613.9 7916.6 8184.6 10917.0 8715.2 6244.7 7296.7 9573.4 6151.2 True False 6203.18768301333 9152.033813241895 8426.91670300786 8962.461923210278 11776.10579076686 8660.805204060704 6875.975218398865 7271.389450762585 7835.111885774836 6096.705153561181 1.0174655862092905 1.5011442381949616 1.3822083388903212 1.4700500840154889 1.9315524523747474 1.420571437508634 1.1278182305376043 1.1926752676427614 1.2851387246762662 1.0 12.573814061297634 -6.697783901701612 5.661630459800233 1.1676746822881117 1.4783324446538795 0.31423583739020966 0.21751732432266535 0.2590516863344022 15.884392223957724 0.08818175908789118 0.06695409411050941 2.005469670203958e-07 6.697783901701612 0.3106577623657678 EVDYSDS(ph)LTEK ddPTM_KYSE-520_SHP099_60min_R1 2 EVDYSDSLTEK 11 0 P51532-5;A0A2R8YF58;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4P4;A0A2R8Y7F3;Q9HBD4;A0A2R8YF80;A0A2R8Y6N0;A0A2R8Y526;A0A2R8Y7Y7;A0A2R8Y7S2;A0A2R8YGG3;A0A0A0MT49;A0A2R8YDA1;A0A2R8Y6V2;A0A2R8Y4C5;P51532-2;P51532-3;P51532-4;P51532;K7EP28;A0A2R8Y5K3;K7EQF0;A0A2R8Y523;A0A2R8YFK5 P51532-5 SMARCA4 Transcription activator BRG1 1 EVDYS(0.084)DS(0.916)LTEK;EVDYS(0.017)DS(0.982)LT(0.001)EK 198.52 4.3056999999999997e-07 728630000.0 1098720.0 847070.0 761600.0 733880.0 708120.0 703320.0 727710.0 838680.0 1026320.0 799770.0 True False 1037771.8113559807 806375.4857220086 810693.954603085 803627.7345509316 763845.0153483393 698930.3189966925 801274.0285651895 835770.8148293832 839966.1594217751 792684.6600116437 1.3091861918215209 1.0172714654401964 1.0227193681169215 1.0138050792343165 0.9636177585890451 0.8817255514777163 1.0108357950984186 1.0543547226170702 1.0596472996076862 1.0 19.596387532149507 -4.255967856444313 4.232667418726849 0.999010167701363 1.3349694533730516 0.788882984479178 0.04762684146486575 0.10936381520242819 4.475646303564991 0.013410621880653359 0.11206590433120492 5.546667641408989e-05 4.255967856444313 0.33595928567168865 EVEDKES(ph)EGEEEDEDEDLSK ddPTM_KYSE-520_SHP099_60min_R1 14 EVEDKESEGEEEDEDEDLSK 20 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK;EVEDKES(1)EGEEEDEDEDLSK 308.35 1.3639999999999999e-53 106532600000.0 35648010.0 32634400.0 30246590.0 29858570.0 31232410.0 29003080.0 29612790.0 30896620.0 39494150.0 29012560.0 True False 33670543.82275384 31066594.4387669 32196333.58765507 32696319.51549362 33690222.97889575 28822061.019573707 32606339.806179635 30789446.836545337 32323007.92650201 28755531.2898301 1.1709240731247423 1.0803693427063943 1.1196570587809613 1.1370445284402466 1.1716084338462873 1.002313632430333 1.1339154014417894 1.0707312804001143 1.1240622752094174 1.0 24.777336157550728 -6.238614747254117 24.998841951385224 1.074857136516141 1.1319933984059944 0.3399081529844987 0.04766539020049428 1109.3954454627587 1215074.3799151916 0.015125172801142115 0.015114937397625572 5.772783267863983e-07 6.238614747254117 0.057136261889853435 EVEDKES(ph)EGEEEDEDEDLSKYK ddPTM_KYSE-520_SHP099_60min_R1 3 EVEDKESEGEEEDEDEDLSKYK 22 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 EVEDKES(1)EGEEEDEDEDLSKYK;EVEDKES(1)EGEEEDEDEDLSKYK;EVEDKES(1)EGEEEDEDEDLSKYK 205.0 1.2032e-14 2660740000.0 1352790.0 1483780.0 1275410.0 1038310.0 1037590.0 1098570.0 947050.0 881760.0 1671490.0 824166.0 True False 1277748.0419799944 1412496.9816008152 1357624.9693281527 1136990.6702207143 1119242.4299204696 1091713.417136148 1042787.0563173012 878701.3803643321 1367989.5508339528 816864.5304314451 1.5642104588690164 1.7291691938867435 1.6619952498256878 1.391896242110289 1.370168967098274 1.3364681369621172 1.2765728189550967 1.0757002509341744 1.6746834999818376 1.0 19.63973731476624 -5.435489616948598 1.8847370321509147 1.2880373107440535 1.6687051077099575 0.4643118401259265 0.17384183077429696 0.3008771064629874 2.114880501423927 0.05317892561927975 0.09142542442115982 3.6686846537617527e-06 5.435489616948598 0.380667796965904 EVEEDEYK ddPTM_KYSE-520_SHP099_60min_R1 3 EVEEDEYK 8 0 P14625 P14625 HSP90B1 Endoplasmin 0 ;; 168.72 0.00010086 1399740000.0 2045630.0 2093940.0 1993060.0 1732090.0 1990140.0 2076930.0 1697570.0 1906780.0 2301540.0 1913400.0 False True 1932154.8260376921 1993343.979331984 2121535.8366087484 1896707.3128281506 2146752.695652355 2063967.1094719325 1869176.9422866397 1900165.8252257966 1883638.3531019513 1896448.7646026758 1.0188278545149607 1.0510929778530604 1.1186887176744955 1.0001363328291808 1.1319856015736445 1.088332649948681 0.9856195311863594 1.001960011096793 0.9932450526796023 1.0 20.854868964920406 -6.765715413102251 24.999999999319996 0.9953694701710852 1.06950436756396 0.4672127018142487 0.038158848884061236 99.25558431164707 580293.0842330948 0.015543722796214469 0.010893970970270166 1.7150808070289378e-07 6.765715413102251 0.07413489739287471 EVEEEPGIHSLK ddPTM_KYSE-520_SHP099_60min_R1 2 EVEEEPGIHSLK 12 0 A0A494C039;Q9Y4L1;E9PJ21;A0A087WWI4;K7EQK2;A0A087X054;Q9Y4L1-2 A0A494C039 HYOU1 Hypoxia up-regulated protein 1 0 ; 128.28 0.00011489 268170000.0 533380.0 478420.0 428770.0 320140.0 564230.0 471800.0 351770.0 412020.0 533300.0 440730.0 False True 503792.3481333311 455435.98507693986 456409.20025625586 350566.0093463997 608631.690970448 468855.32119467563 387330.34454436053 410590.7987861912 436466.1633989724 436825.47508275125 1.1533034973244036 1.042603994171043 1.0448319209629309 0.8025310549481787 1.3933063103866599 1.073324125855656 0.8866935804762429 0.9399424305746129 0.9991774479642911 1.0 18.736697469210704 -6.696450887723026 9.059376650363992 0.9516076688888856 1.0827506248925827 0.17078128565270811 0.1385698974775949 0.589468750563734 76.15015257611532 0.054051112583945154 0.0417587871790672 2.0116346714415332e-07 6.696450887723026 0.13114295600369708 EVEEFS(ph)EDDDEDDS(ph)DDS(ph)EAEKQSQK ddPTM_KYSE-520_SHP099_60min_R1 1 EVEEFSEDDDEDDSDDSEAEKQSQK 25 1 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 3 EVEEFS(1)EDDDEDDS(1)DDS(1)EAEKQSQK 213.35 4.7168e-21 0.0 572660.0 527080.0 463850.0 488280.0 549580.0 515250.0 525940.0 474620.0 609290.0 519690.0 True False 540893.4082305923 501758.2856367907 493750.5131862402 534685.9843932647 592828.8193175457 512034.13362771674 579107.1478797545 472973.65399714105 498658.2949509838 515085.9509127022 1.0501032056342456 0.9741253566471855 0.9585788785567597 1.0380519667559025 1.1509318362636134 0.994075130025236 1.1242922600657435 0.9182421946454944 0.9681069616971506 1.0 18.974453665196936 -7.284791849456932 24.990520282488333 0.957380936489499 1.0379322827652682 0.2655524226488042 0.06010832581886087 1165.3614095326789 1247098.2311554716 0.0339689208985089 0.016334793832006027 5.1904875125915045e-08 7.284791849456932 0.08055134627576921 EVEERPEKDFTEK ddPTM_KYSE-520_SHP099_60min_R1 1 EVEERPEKDFTEK 13 2 Q32MZ4-3 Q32MZ4-3 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 0 55.213 0.04024 237520000.0 483260.0 455580.0 322210.0 286050.0 438350.0 415870.0 267770.0 334280.0 424000.0 372390.0 False True 456452.60444507416 433693.25296047895 342980.1721542281 313236.1059959318 472845.65112967393 413274.4010708562 294838.8047833626 333120.4607015386 347012.28817019326 369090.9143150361 1.2366942309922884 1.1750309642959722 0.9292566109104455 0.8486692406862401 1.2811088888687148 1.119708952570172 0.7988243366286283 0.9025431073526913 0.9401810630158246 1.0 18.49361669851729 -6.746863228995457 24.99513654858132 0.9022657114709193 1.0911578641787856 0.3290656836949297 0.13107808411354974 303.23040881897657 519978.85535413114 0.05395496206801784 0.04160552370323064 1.7911698527479536e-07 6.746863228995457 0.1888921527078663 EVELVS(ph)E ddPTM_KYSE-520_SHP099_60min_R1 1 EVELVSE 7 0 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 EVELVS(1)E 53.166000000000004 0.032529 1032400000.0 2235900.0 1988700.0 1685900.0 1766300.0 1735900.0 1883600.0 1573700.0 1983300.0 2258000.0 2098700.0 True False 2111870.1698438507 1893159.8669004426 1794575.8115353752 1934168.6209425388 1872505.454080075 1871843.7537140553 1732784.9538319372 1976420.395205698 1848004.1195478695 2080107.1507638902 1.0152698956245094 0.9101261279762469 0.8627323889907991 0.9298408595116086 0.9001966333284435 0.89987852453978 0.8330267761425637 0.9501531661385257 0.888417752359159 1.0 20.98822641590886 -10.673066290888213 2.52964940874957 1.0137595520576317 0.9074964945264982 0.24794290014849552 0.0468676519600986 23781092.124121882 19295740.345316675 2108004.1104115252 0.011384479099236025 2.1229203938264616e-11 10.673066290888213 -0.10626305753113352 EVFEDAAEIR ddPTM_KYSE-520_SHP099_60min_R1 4 EVFEDAAEIR 10 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ;;; 239.6 1.0059e-12 682520000.0 790050.0 1091710.0 1097450.0 541399.0 926010.0 1055010.0 799250.0 800030.0 988990.0 958510.0 False True 746224.3515743716 1039262.612909881 1168193.3829820848 592853.398182455 998881.7187238254 1048425.2912539114 880045.9899283054 797254.8826584057 809414.3464090562 950018.3471094955 0.7854841475902197 1.0939395181913256 1.2296534972576094 0.6240441566062986 1.0514341346806622 1.1035842564976 0.9263463096327703 0.8391994587095244 0.8519986470490408 1.0 19.85759585001544 -6.993707691475991 24.914743742501614 0.8839139909557759 0.9872258788160088 0.048568999780773336 0.16640779811103887 444.64155116426736 1760576.5090531616 0.07046049025551135 0.047367746066427525 1.0145940439679312e-07 6.993707691475991 0.10331188786023282 EVGVYEALKDDSWLK ddPTM_KYSE-520_SHP099_60min_R1 4 EVGVYEALKDDSWLK 15 1 A0A5K1VW95;P40925;P40925-3;B8ZZ51;B9A041;P40925-2 A0A5K1VW95 MDH1 Malate dehydrogenase, cytoplasmic 0 ;;; 184.99 6.6346e-11 967572000.0 1617560.0 1229210.0 895238.0 834282.0 1413420.0 1205860.0 1038631.0 1087159.0 1128460.0 1122090.0 False True 1527830.7222740843 1170156.9065181736 952946.4739114445 913571.9104439707 1524648.1127402862 1198333.7804489457 1143625.95754173 1083387.899173819 923560.1101616423 1112149.1555728107 1.3737642245362112 1.0521582475288453 0.8568513217281822 0.8214472904701681 1.3709025494471725 1.0774937646126663 1.0283026802755673 0.9741390295943009 0.8304282798164462 1.0 20.08491885700319 -4.278179281072472 4.268769217936012 1.0027269303036173 1.3969192310415577 0.3587497769196326 0.15060881859751285 0.23290209632553519 9.768954084724442 0.04005782493976013 0.2710679211089908 5.270122606202839e-05 4.278179281072472 0.3941923007379404 EVHDELEDLPS(ph)PPPPLS(ph)PPPT(ph)TSPHK ddPTM_KYSE-520_SHP099_60min_R1 3 EVHDELEDLPSPPPPLSPPPTTSPHK 26 0 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 3 EVHDELEDLPS(1)PPPPLS(0.994)PPPT(0.407)T(0.313)S(0.287)PHK;EVHDELEDLPS(0.999)PPPPLS(0.853)PPPT(0.413)T(0.395)S(0.34)PHK;EVHDELEDLPS(1)PPPPLS(0.973)PPPT(0.379)T(0.341)S(0.307)PHK 77.439 0.0079445 641290000.0 460236.0 437652.0 390934.0 459137.0 456968.0 422724.0 417110.0 443631.0 482980.0 428641.0 True False 434705.7916222804 416626.5409909551 416134.2311565161 502773.2424354271 492928.78180774406 420085.6227144938 459275.54940130893 442092.1476052543 395283.00693499966 424843.57421765145 1.0232137614951342 0.9806586853953764 0.9794998828046921 1.183431439115639 1.1602594736556187 0.9888006979700248 1.0810462421305627 1.0405998217564336 0.9304201144219081 1.0 18.696572218647987 -9.541310106550414 8.463569447837985 0.9999999322134157 1.044649605854839 0.02282095294080777 0.07676812595257426 0.0 0.0 0.07892488955762512 0.019142097419782164 2.8753445511993786e-10 9.541310106550414 0.04464967364142325 EVHDELEDLPS(ph)PPPPLS(ph)PPPTT(ph)SPHKQTEDK ddPTM_KYSE-520_SHP099_60min_R1 1 EVHDELEDLPSPPPPLSPPPTTSPHKQTEDK 31 1 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 3 EVHDELEDLPS(1)PPPPLS(0.996)PPPT(0.11)T(0.43)S(0.399)PHKQT(0.065)EDK 66.044 0.012546 351470000.0 161950.0 126310.0 103930.0 108880.0 146540.0 109540.0 114780.0 115760.0 161870.0 134480.0 True False 152966.3106606791 120241.87800482457 110629.49409387949 119227.92246403423 158071.8643014541 108856.32022820025 126383.08254484943 115358.45557858724 132478.48841063507 133288.61182385677 1.147632258807127 0.9021166651786149 0.8299995969654054 0.8945094470756138 1.1859367588759109 0.8166963309067677 0.9481911531336742 0.865478708196282 0.9939220357828297 1.0 17.024193996295793 -4.256314024649187 24.41664973839754 0.9328551260115674 1.1476323830642554 0.2765271997261607 0.10175955167310882 525.8154065029881 2504815.160424547 0.025113030851299987 0.2039804276072616 5.542248255408565e-05 4.256314024649187 0.21477725705268802 EVHHPHRGDR ddPTM_KYSE-520_SHP099_60min_R1 1 EVHHPHRGDR 10 1 I3L3P4 I3L3P4 TNFRSF12A 0 52.79 0.067148 7481000.0 5314.4 7240.9 4985.8 2994.0 2420.8 5910.0 2807.6 5513.8 5890.6 748.66 False True 5019.599638006247 6893.036295187517 5307.192645562058 3278.5488598210754 2611.3031875321412 5873.113497796813 3091.4196075354557 5494.673914730595 4821.015529941845 742.027454848666 6.7647087789089655 9.289462607004653 7.152286092492955 4.418365976080662 3.5191463206232814 7.914954439245937 4.166179549469555 7.404946917835022 6.497085112470771 1.0 9.535328756999844 -5.07398847338587 5.072101079791573 5.294947455108506 8.078715765689019 0.28297692557943377 1.991075616916184 0.27571305605874197 12.95820076823322 0.5230409629800268 0.9495145160795109 8.433571410174394e-06 5.07398847338587 2.7837683105805127 EVHNRS(ph)PVSFR ddPTM_KYSE-520_SHP099_60min_R1 4 EVHNRSPVSFR 11 1 Q9H0K1 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 1 EVHNRS(1)PVSFR;EVHNRS(0.997)PVS(0.003)FR;EVHNRS(0.998)PVS(0.002)FR;EVHNRS(0.996)PVS(0.004)FR 114.21 0.00018044 3737090000.0 1603440.0 1721160.0 1521860.0 1238500.0 1296050.0 1321020.0 1027510.0 974260.0 1253450.0 1112460.0 True False 1514493.9868216042 1638472.8900861698 1619961.5306620928 1356206.6676313959 1398041.761484234 1312775.024172511 1131380.7383312273 970880.5194539932 1025855.0769031349 1102604.4698807835 1.3735605361597667 1.4860024014443964 1.4692136436171417 1.230002874719012 1.2679449427911298 1.1906128262970417 1.0260984507468534 0.8805338142325574 0.9303926339189004 1.0 20.07248392446167 -6.309085888262282 0.8168664987090138 0.912683949920238 1.4443298903370478 0.8981281768686832 0.06640568130610591 0.18414247395090713 0.26496153337281897 0.04705480378042694 0.042577067091256596 4.908108013398916e-07 6.309085888262282 0.5316459404168098 EVIEIEDAS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 4 EVIEIEDASPTK 12 0 P46100-2;P46100-5;P46100-3;P46100-4;P46100 P46100-2 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.989)PT(0.011)K;EVIEIEDAS(0.998)PT(0.002)K;EVIEIEDAS(0.998)PT(0.002)K;EVIEIEDAS(0.988)PT(0.012)K 233.86 3.5411000000000003e-15 605990000.0 1551340.0 1531780.0 1144590.0 1106270.0 1189140.0 1552060.0 1368870.0 1618100.0 1571230.0 1577500.0 True False 1465284.0776803803 1458190.989551346 1218372.1028087507 1211409.5681877974 1282718.5527189255 1542373.0178325747 1507248.7384837784 1612487.1887673798 1285934.2394850303 1563524.5772764285 0.9371672815228926 0.9326306799036267 0.7792471704737037 0.7747940683465331 0.820401912039879 0.98647187274747 0.9640070648005551 1.0313155368342475 0.8224586029373808 1.0 20.57637046670426 -6.261928363619491 24.99854636053023 0.9630051171887363 0.8455219565740184 0.37403807961002067 0.07235505970035055 50.30463092560769 2571685.153103057 0.02592841453189562 0.024283985788735852 5.47106199996528e-07 6.261928363619491 -0.11748316061471786 EVIEIEDAS(ph)PTKCPITTK ddPTM_KYSE-520_SHP099_60min_R1 9 EVIEIEDASPTKCPITTK 18 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100 P46100-2 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.709)PT(0.29)KCPIT(0.001)TK;EVIEIEDAS(0.989)PT(0.011)KCPITTK;EVIEIEDAS(0.991)PT(0.009)KCPITTK;EVIEIEDAS(0.983)PT(0.017)KCPITTK;EVIEIEDAS(0.988)PT(0.012)KCPITTK;EVIEIEDAS(0.989)PT(0.011)KCPITTK;EVIEIEDAS(0.98)PT(0.02)KCPITTK;EVIEIEDAS(0.981)PT(0.019)KCPITTK;EVIEIEDAS(0.989)PT(0.011)KCPITTK 225.23 8.531e-19 19899910000.0 9351600.0 9461870.0 7472610.0 6443950.0 6802440.0 9094800.0 7309630.0 8394720.0 10090730.0 8979730.0 True False 8832848.106047576 9007307.562643584 7954306.397198735 7056381.07055579 7337753.327410836 9038035.979655232 8048558.7355141025 8365600.675662386 8258507.798602861 8900176.578324223 0.9924351532035195 1.0120369504331264 0.8937245600914154 0.7928360756056378 0.8244503086917889 1.0154895130582866 0.9043145003567482 0.9399364835116013 0.9279038147081147 1.0 23.085402528565634 -8.570396503406618 0.744622328268126 1.0007786513414194 0.9158943996967053 0.10009417892358641 0.07026881647525282 5.26005065106666 4.539629664700265 0.08961068568418071 0.02805608621539761 2.6890786002619325e-09 8.570396503406618 -0.08488425164471414 EVIEIEDASPT(ph)KCPITTK ddPTM_KYSE-520_SHP099_60min_R1 2 EVIEIEDASPTKCPITTK 18 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100 P46100-2 ATRX Transcriptional regulator ATRX 1 EVIEIEDAS(0.389)PT(0.611)KCPIT(0.001)TK;EVIEIEDAS(0.367)PT(0.633)KCPITTK 94.384 0.0029803 7527810000.0 1802370.0 1872590.0 1393210.0 1380200.0 1388920.0 1721350.0 1642900.0 1790800.0 1959250.0 1643230.0 True False 1702388.943164482 1782627.9655851056 1483018.545814818 1511373.7930277372 1498220.1021262165 1710606.4161476386 1808980.3651588557 1784588.1327758622 1603499.5886732347 1628672.2606135947 1.0452618272770944 1.0945283521397415 0.9105690455218398 0.9279790842992157 0.9199027565937478 1.0503073316317033 1.110708648330101 1.095731889056382 0.9845440531228326 1.0 20.6352648873938 -6.4097715695648105 8.36649258431715 1.0591821773050807 0.9794543711625504 0.21287925185478895 0.06448441502490511 0.472122360130483 31.814762667971046 0.024772512426534932 0.021811723197514926 3.8924982898512243e-07 6.4097715695648105 -0.07972780614253028 EVIKPYDWTYTTDYK ddPTM_KYSE-520_SHP099_60min_R1 1 EVIKPYDWTYTTDYK 15 1 O75663;O75663-2 O75663 TIPRL TIP41-like protein 0 97.904 0.0016099 218570000.0 349680.0 298820.0 230820.0 205650.0 375960.0 354850.0 263460.0 282820.0 283910.0 205820.0 False True 330282.5533302022 284464.23866203544 245699.0265250578 225194.91416907278 405545.91308021516 352635.24952507555 290093.10792181606 281838.96343068394 232359.10078867857 203996.5949255369 1.6190591487606072 1.3944558180780957 1.2044270965147392 1.1039150641277797 1.9880033449982244 1.7286330178883376 1.4220487750185549 1.3815866070390106 1.1390342121813093 1.0 17.63818554562848 -7.779625760785428 1.9400158157550857 1.0026384280065308 1.4914748733780243 0.34020281561727883 0.23773189835048944 0.4122671546723851 3.037801438064074 0.24569211885943856 0.07150516999862376 1.6610176190915162e-08 7.779625760785428 0.4888364453714935 EVIKS(ph)PTASR ddPTM_KYSE-520_SHP099_60min_R1 4 EVIKSPTASR 10 1 O94885 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 EVIKS(0.554)PT(0.32)AS(0.126)R;EVIKS(0.38)PT(0.38)AS(0.24)R;EVIKS(0.962)PT(0.037)AS(0.001)R;EVIKS(0.929)PT(0.071)ASR 148.22 0.00027101 2183490000.0 2531040.0 2386120.0 2274650.0 2080670.0 2295990.0 2248570.0 2127060.0 2308940.0 3136000.0 2113130.0 True False 2390638.165696848 2271487.2135608634 2421277.578568682 2278416.2512237513 2476671.350603904 2234535.84056531 2342083.9829051 2300930.8260506485 2566581.452126715 2094409.3121902642 1.1414378993554024 1.0845478963161297 1.1560670421373316 1.0878562456547993 1.1825154406011893 1.0669050350184444 1.118255142045671 1.0986060903465 1.2254440606180597 1.0 20.998111986263915 -11.399868497005963 2.2507589503808454 0.00012697351760411772 1.1258722784369346 0.4070287138271712 0.04659241321896753 1256361.4691535921 337481.7755298813 6725213.578953207 0.010800858924722736 3.982277343964891e-12 11.399868497005963 1.1257453049193304 EVIKSPT(ph)ASR ddPTM_KYSE-520_SHP099_60min_R1 2 EVIKSPTASR 10 1 O94885 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 EVIKS(0.164)PT(0.812)AS(0.024)R;EVIKS(0.222)PT(0.647)AS(0.131)R 127.79 0.0012840999999999998 1178800000.0 1294740.0 1198680.0 1119090.0 988020.0 1056510.0 1035690.0 1047060.0 1087860.0 1552420.0 1066310.0 True False 1222918.1911997981 1141093.6135446373 1191228.3320073085 1081921.1237409564 1139651.3262803957 1029225.874540302 1152907.0431208408 1084086.4675684327 1270539.6613235183 1056863.322976628 1.1571204758582034 1.0796983760688912 1.1271356533144181 1.0237095944381471 1.0783336894222022 0.9738495528840134 1.0908761975708534 1.0257584344162227 1.2021797272187253 1.0 20.011357384064198 -4.137622165700189 0.974566464134395 1.0584700585457503 1.2164769293674986 0.1761943059818557 0.06210931240390058 4.336567198850004 2.821651233502 0.019849511259415246 0.7619330475090302 7.284132452891172e-05 4.137622165700189 0.15800687082174836 EVITFR ddPTM_KYSE-520_SHP099_60min_R1 2 EVITFR 6 0 Q01518-2;Q01518;Q5T0R4;Q5T0R3;Q5T0R2;Q5T0R1;Q5T0R9;Q5T0R7;Q5T0R6;Q5T0R5 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 0 ; 126.24 0.05769199999999999 581390000.0 510370.0 484840.0 358830.0 320970.0 544720.0 488040.0 384060.0 411110.0 439390.0 438390.0 False True 482058.7587026287 461547.5586403231 381960.75594829925 351474.8922968507 587586.3649671637 484993.9613307537 422884.53286439244 409683.9553637951 359607.85212052206 434506.2056622595 1.1094404462368754 1.0622346761120434 0.8790685862958568 0.8089064959639521 1.3523083383160999 1.1161957067829273 0.973253148870098 0.9428725068250035 0.8276242029096457 1.0 18.729017256342388 -7.037543056914137 3.6256113077729513 0.9166882518647415 1.049349745401175 0.14651845251071516 0.14246013679766015 0.518354892498082 14.101372985703996 0.07585822457488349 0.04372317554841107 9.171849991354961e-08 7.037543056914137 0.13266149353643364 EVKLS(ph)PEGQK ddPTM_KYSE-520_SHP099_60min_R1 1 EVKLSPEGQK 10 1 E7EQQ5;Q9C035-6;Q9C035-5;Q9C035-4;Q9C035-3;Q9C035-2;Q9C035 E7EQQ5 TRIM5 Tripartite motif-containing protein 5 1 EVKLS(1)PEGQK 66.24600000000001 0.018851 706330000.0 2198300.0 2013200.0 1841200.0 2020200.0 1987800.0 2025300.0 2004900.0 2111400.0 2571100.0 2022000.0 True False 2076355.9167975944 1916482.8501251948 1959886.6980241577 2212199.2006047224 2144228.550965133 2012659.3514531096 2207574.857938394 2104076.0462044636 2104253.0521565643 2004086.6530921934 1.0360609475612712 0.9562874175965241 0.977945087853443 1.1038440863779133 1.069928063068884 1.0042776086291922 1.1015366299317595 1.0498927493768755 1.0499810718812082 1.0 20.934513458737364 -5.2401069322155065 24.907607116752672 1.0568339878572095 0.9867167671740829 0.38073199150434556 0.03728925648860917 729.8459346170308 852161.3400324178 0.009790409847511969 0.01693602683778333 5.75298269654919e-06 5.2401069322155065 -0.07011722068312665 EVLAS(ph)PDRLWGSR ddPTM_KYSE-520_SHP099_60min_R1 8 EVLASPDRLWGSR 13 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EVLAS(1)PDRLWGSR;EVLAS(1)PDRLWGSR;EVLAS(1)PDRLWGSR;EVLAS(1)PDRLWGSR;EVLAS(1)PDRLWGSR;EVLAS(1)PDRLWGSR;EVLAS(1)PDRLWGSR;EVLAS(1)PDRLWGSR 216.71 1.7741e-11 8844960000.0 1473732.0 1306010.0 1192389.0 1170105.0 1269192.0 1208721.0 1124074.0 1207161.0 1521695.0 1254818.0 True False 1391981.1481480915 1243267.319239024 1269252.3028298565 1281311.4273951037 1369070.1896853512 1201176.9238867122 1237706.3698250512 1202973.6402444954 1245393.5468092994 1243701.288753633 1.1192246568651998 0.9996510661213162 1.0205443335206554 1.0302404918138837 1.1008030642609978 0.9658082167708162 0.9951797758973222 0.9672528694169381 1.0013606627821077 1.0 20.246208590980647 -6.282457330138395 24.994025796111774 0.9844523235873368 1.0478792674363422 0.4760885330748168 0.03544221287658423 778.967984321295 926325.496693015 0.012351570890003726 0.010903711296158376 5.218463736417306e-07 6.282457330138395 0.06342694384900538 EVLASPDRLWGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 EVLASPDRLWGSR 13 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 EVLAS(0.452)PDRLWGS(0.548)R 162.32 1.6037e-06 752210000.0 417290.0 386140.0 378350.0 341650.0 347550.0 358400.0 341220.0 356560.0 447130.0 367600.0 True False 394142.0918530082 367589.2547920432 402739.04638140433 374120.31327918195 374900.20771100343 356163.0926582703 375713.84758628334 355323.17658172984 365942.46323004394 364343.3499884727 1.08178752779618 1.0089089173815664 1.105383277598305 1.0268344771244449 1.0289750251318288 0.9775479439093339 1.0312081930359656 0.975242656667047 1.0043890282109496 1.0 18.474939133236024 -5.781615024208809 2.0565374632686444 0.9987022013896072 1.0594848537242647 0.4928033651860201 0.028282298082521504 0.2670996595868829 2.3241269495560757 0.009118210602652695 0.011635980655374897 1.6534268116761026e-06 5.781615024208809 0.060782652334657516 EVLDEDT(ph)DEEKETLK ddPTM_KYSE-520_SHP099_60min_R1 8 EVLDEDTDEEKETLK 15 1 Q9Y3P9 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 EVLDEDT(1)DEEKETLK;EVLDEDT(1)DEEKETLK;EVLDEDT(1)DEEKETLK;EVLDEDT(1)DEEKETLK;EVLDEDT(1)DEEKETLK;EVLDEDT(1)DEEKETLK;EVLDEDT(1)DEEKETLK;EVLDEDT(1)DEEKETLK 283.08 1.6531e-32 18409740000.0 30571770.0 27586460.0 25576330.0 26229440.0 27926710.0 27582060.0 26112040.0 28578010.0 34883020.0 26417890.0 True False 28875892.974787444 26261165.053479377 27225021.155374866 28722278.09143134 30124383.195755858 27409910.132494334 28751699.83215205 28478879.553467643 28549142.897374086 26183848.047407437 1.1028131893565032 1.0029528511596901 1.039763945546977 1.0969464090773793 1.1504948829986275 1.0468251298612425 1.0980700690019038 1.0876506578370342 1.0903341191746965 1.0 24.64217379934633 -5.256875314446459 24.32310436801257 1.087250189581853 1.0439542774027954 0.09633954105815956 0.04316303694303908 464.4574770433196 2475192.9581011385 0.011297319194872988 0.018812585041610628 5.5350899833972995e-06 5.256875314446459 -0.04329591217905748 EVLEGLDYLHR ddPTM_KYSE-520_SHP099_60min_R1 2 EVLEGLDYLHR 11 0 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 0 ; 183.99 1.8767e-06 738030000.0 711450.0 588580.0 420500.0 378660.0 630410.0 645590.0 444330.0 451420.0 429280.0 484490.0 False True 671984.450259587 560303.7333234085 447606.10282378824 414647.73255172005 680019.6804577572 641560.6333405492 489247.2126429078 449854.12938221963 351333.57326816174 480197.7955275162 1.3993909520583816 1.1668186287858584 0.9321286082375186 0.8634936195327868 1.4161241196676648 1.3360341078529308 1.0188451867119683 0.9368100677930792 0.7316434530529403 1.0 18.873269254954703 -7.111574213861687 3.1014462808404857 0.8729309681404701 1.169089752208939 0.34151672548518475 0.1830430755254785 0.3402904120612086 6.183411099234934 0.10599593889488683 0.056539643262498565 7.734384994246552e-08 7.111574213861687 0.29615878406846885 EVLEGLEYLHK ddPTM_KYSE-520_SHP099_60min_R1 2 EVLEGLEYLHK 11 0 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 0 ; 101.93 0.0022984000000000004 79013000.0 182198.0 159533.0 107522.0 99291.0 168352.0 155277.0 123753.0 123746.0 121236.0 130365.0 False True 172091.11373729174 151868.7952160849 114453.04016128268 108727.58678707227 181600.34460815077 154307.85864592143 136263.16095289055 123316.75400853337 99222.59851085275 129210.0675224352 1.3318707824946454 1.1753634846581547 0.8857904214113176 0.8414792196296431 1.4054659059489993 1.1942402136670072 1.054586252957655 0.954389672361416 0.7679169310365416 1.0 16.97935895777234 -7.255257466664356 2.7720740788711997 0.8822060513083383 1.1265779574091548 0.2647515034636567 0.1720866624179581 0.4224574555871513 6.4138153182015305 0.11503184524707721 0.05214814538298861 5.555747932693772e-08 7.255257466664356 0.2443719061008165 EVLHGNQR ddPTM_KYSE-520_SHP099_60min_R1 7 EVLHGNQR 8 0 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 ;;;;;; 148.99 0.00074806 7370660000.0 5357050.0 4953376.0 3602518.0 3320173.0 4849590.0 4817736.0 3647517.0 4518642.0 4447989.0 4170672.0 False True 5059883.757485578 4715408.381791038 3834742.0745126028 3635721.2436735868 5231225.142607407 4787666.722575572 4016243.6146954307 4502967.885560966 3640346.322277945 4133723.0908137113 1.2240500019776492 1.1407170432557503 0.9276727033396291 0.87952704228137 1.2654996543509778 1.1581972515805683 0.9715802259761055 1.0893249950795736 0.8806459074067667 1.0 21.979010318297934 -4.553105349991504 7.486821484150564 1.0313696634452132 1.2041082317756169 0.24338450064345374 0.11651691250748406 0.24732374375629718 48.21351169800992 0.031179873824050606 0.08553759768924604 2.7983024325917904e-05 4.553105349991504 0.17273856833040369 EVLQS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 EVLQSSR 7 0 A0A0A0MQZ3;A0A5F9ZH43;A4UGR9-2;A4UGR9-3;A4UGR9;A4UGR9-8 A0A0A0MQZ3 XIRP2 Xin actin-binding repeat-containing protein 2 1 EVLQS(0.689)S(0.311)R 76.679 0.026507 473090000.0 1159100.0 1249900.0 1134600.0 843410.0 1087700.0 1067000.0 1084000.0 1191300.0 1638700.0 1084800.0 True False 1094802.412391436 1189852.9278618514 1207738.1314241868 923567.4328195379 1173295.8018335733 1060340.4572164465 1193581.2988204986 1187167.6583515094 1341153.3882653217 1075189.5159616296 1.0182413389813099 1.1066448381406222 1.123279304248059 0.8589810625092603 1.0912455752362868 0.9861893568298958 1.1101124788712078 1.1041473533061086 1.2473646444234707 1.0 20.036159545083333 -6.895583774671741 6.288687402898438 1.1270198422809834 1.0335583392707481 0.17249528956364202 0.08991920313723208 0.3616928385673523 18.994643619011985 0.03754725954338921 0.025178090228362114 1.2717923998176203e-07 6.895583774671741 -0.09346150301023526 EVLYDS(ph)EGLS(ph)GEER ddPTM_KYSE-520_SHP099_60min_R1 2 EVLYDSEGLSGEER 14 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 EVLYDS(1)EGLS(1)GEER;EVLY(0.001)DS(0.999)EGLS(1)GEER 127.83 5.3656e-05 803250000.0 995740.0 918460.0 890140.0 826600.0 918060.0 859330.0 849240.0 899020.0 1082040.0 893060.0 True False 940504.3172415225 874335.8029634327 947519.8486743561 905159.8154736472 990306.0989531379 853966.6027177211 935089.4669836902 895901.5094528456 885568.812008671 885148.1831901657 1.062538832596196 0.9877846665314682 1.0704646596679401 1.0226082283887852 1.1188026115401064 0.9647724741861154 1.0564213820261494 1.0121486169964489 1.0004752072325216 1.0 19.755559472296643 -7.446253980133681 5.094970779428804 1.0018154594102255 1.0389703999607052 0.1454254722291064 0.04078029796657282 0.4288616205540216 19.81826571171818 0.02273208981783866 0.010244582089856543 3.5788707963703384e-08 7.446253980133681 0.03715494055047963 EVMAEFSDAVTEETLKK ddPTM_KYSE-520_SHP099_60min_R1 1 EVMAEFSDAVTEETLKK 17 1 A0A0A0MTR2;Q8N543;H3BR79;H3BR02 A0A0A0MTR2 OGFOD1 Prolyl 3-hydroxylase OGFOD1 0 165.45 9.1051e-08 181120000.0 148970.0 107200.0 76833.0 154930.0 119890.0 111220.0 112310.0 123150.0 102130.0 100630.0 False True 140706.33713566753 102049.95108951953 81785.77811714663 169654.50061859709 129324.66091921217 110525.83472503573 123663.39083997262 122722.82139342614 83585.76648778743 99738.49648895542 1.4107525387777295 1.0231751498361523 0.8200021154941233 1.7009931630299222 1.2966373614177449 1.1081562146595507 1.2398762282692575 1.2304458730939052 0.8380491929416976 1.0 16.60586283476546 -7.75286450154454 24.899137526430582 0.919024582829833 1.222631909950111 0.2351890581354037 0.22319646089608824 239.87621442433024 696551.1771142072 0.15990436556693258 0.058308141412373546 1.7665889046638165e-08 7.75286450154454 0.30360732712027805 EVMESAVGNSSGSGQNEES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 EVMESAVGNSSGSGQNEESPR 21 0 Q9NVF7 Q9NVF7 FBXO28 F-box only protein 28 1 EVMESAVGNSS(0.002)GS(0.006)GQNEES(0.992)PR 92.098 0.035778 37765000.0 52227.0 51225.0 48157.0 40892.0 33338.0 36465.0 35961.0 44151.0 61058.0 43562.0 True False 49329.86419805665 48764.074109707435 51261.27727392431 44778.36338537188 35961.510932727426 36237.408408995056 39596.28882553874 43997.85048592086 49971.40634692373 43176.07457072319 1.142527770032763 1.1294235197280613 1.18726118072539 1.0371105717826226 0.8329036692259233 0.8392937238802829 0.9170886705015135 1.019033131737152 1.1573865119458617 1.0 15.397944463697662 -5.487203130501162 5.367417718388332 0.9517915530249659 1.1468800972145823 0.479887593638207 0.0890302086852275 0.18070244900514404 13.81216201138943 0.028456479527926026 0.04117159987224374 3.256843345806318e-06 5.487203130501162 0.1950885441896164 EVNS(ph)QEEEEEELLRK ddPTM_KYSE-520_SHP099_60min_R1 1 EVNSQEEEEEELLRK 15 1 Q96RL1-2;Q96RL1;Q96RL1-3;D6RC40;D6RCQ3;Q96RL1-5 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 EVNS(1)QEEEEEELLRK 190.67 2.9596000000000004e-11 705330000.0 185720.0 185490.0 162140.0 167730.0 168230.0 186030.0 168450.0 167460.0 231040.0 174660.0 True False 175417.74137635875 176578.78197383377 172591.80383317242 183671.0087701367 181468.74390223593 184868.91776567537 185478.56991357284 166879.12034545772 189088.9600444373 173112.64828342362 1.013315567151172 1.0200224173379597 0.9969912975428666 1.0609912712410632 1.048269700115335 1.0679110948785449 1.0714328025870383 0.9639914934016823 1.0922885295755913 1.0 17.401351611903547 -5.258872102306015 24.954048298994095 1.044427490176412 1.011101026653595 0.15679566518581034 0.03547942929307817 402.44060312355293 3911708.1963281883 0.00946124697724852 0.015480269921553323 5.50969930583627e-06 5.258872102306015 -0.033326463522816985 EVPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 EVPSPK 6 0 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 EVPS(1)PK;EVPS(1)PK 66.692 0.046805 872950000.0 2958300.0 2627800.0 2274200.0 2120200.0 2564600.0 2803600.0 2691300.0 2676900.0 3222300.0 2830600.0 True False 2794197.201775154 2501556.543591788 2420798.5708486554 2321703.1705386234 2766419.4294220647 2786101.692457381 2963362.8685568324 2667614.458693154 2637211.5475726733 2805523.0861734757 0.995963004384409 0.8916542358607801 0.862868882733182 0.8275473411645503 0.9860619016310624 0.9930774429154372 1.056260375528985 0.9508438807151579 0.9400070741066805 1.0 21.41983835387373 -5.8272319817597 11.524380751752268 0.9890495290549788 0.8920789724803172 0.46099392638009673 0.04933135185131284 0.5590550326670177 95.85505737740424 0.01613996986400357 0.01830997450313715 1.488565736398794e-06 5.8272319817597 -0.09697055657466158 EVPSKEEPS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 8 EVPSKEEPSPVK 12 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EVPSKEEPS(1)PVK;EVPS(0.033)KEEPS(0.967)PVK;EVPSKEEPS(1)PVK;EVPSKEEPS(1)PVK;EVPSKEEPS(1)PVK;EVPSKEEPS(1)PVK;EVPSKEEPS(1)PVK;EVPSKEEPS(1)PVK 164.15 3.5818e-06 7991630000.0 9899800.0 8605880.0 7099500.0 7641230.0 7840170.0 8764240.0 7804900.0 10278590.0 9786230.0 9181280.0 True False 9350638.35923796 8192440.607110769 7557145.129601638 8367450.201780438 8457146.774534822 8709539.127230251 8593895.460483499 10242935.970330935 8009297.322782527 9099941.002127755 1.0275493387321506 0.9002740353146471 0.8304608928601427 0.9195059835908777 0.9293628137322391 0.9570984169231185 0.9443902392855149 1.1256046569901852 0.8801482691931505 1.0 23.11742576120544 -6.667277009827876 1.8255790514764045 1.0023756941335598 0.9153358316479269 0.15808984880809973 0.07248659221624355 0.5562173162649942 3.790680597275276 0.03565151025469509 0.024074195685760608 2.15140904504455e-07 6.667277009827876 -0.08703986248563289 EVPSKEEPS(ph)PVKAEVAEK ddPTM_KYSE-520_SHP099_60min_R1 13 EVPSKEEPSPVKAEVAEK 18 2 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 EVPSKEEPS(1)PVKAEVAEK;EVPS(0.042)KEEPS(0.958)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPS(0.001)KEEPS(0.999)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK;EVPSKEEPS(1)PVKAEVAEK 205.02 2.0283e-13 120954500000.0 42299500.0 40551600.0 36067400.0 31003850.0 32949870.0 37294600.0 31566010.0 37963000.0 48955700.0 35223360.0 True False 39953062.41303724 38603440.26680746 38392362.313880354 33950446.582352586 35542837.309885025 37061830.56767059 34757010.34536983 37831315.213630855 40066578.95276781 34911308.433759406 1.144416070478826 1.1057574751187997 1.0997113553256215 0.9724770598836203 1.0180895218328434 1.0615995856469138 0.9955802834292979 1.0836407144525064 1.1476676398075998 1.0 25.057191092586642 -5.025130273276947 18.76456883709278 1.041086858527019 1.1194993179843185 0.3523941335134566 0.04836931741599964 36.96059527998014 27599.93010108482 0.013672757049698774 0.023971491049686967 9.437777332454128e-06 5.025130273276947 0.07841245945729947 EVPWS(ph)PSAEK ddPTM_KYSE-520_SHP099_60min_R1 5 EVPWSPSAEK 10 0 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 EVPWS(0.972)PS(0.028)AEK;EVPWS(0.981)PS(0.019)AEK;EVPWS(0.996)PS(0.004)AEK;EVPWS(0.992)PS(0.008)AEK;EVPWS(0.995)PS(0.005)AEK 159.44 7.9702e-05 9510240000.0 10055330.0 9394360.0 8575130.0 7306460.0 8398260.0 9112200.0 8357680.0 9559460.0 11519410.0 9728400.0 True False 9497540.800096598 8943040.844378164 9127896.600493118 8000863.761632699 9059155.282437084 9055327.379801024 9202555.857496407 9526300.464454735 9427775.524694828 9642213.944580672 0.9849958582836271 0.9274883233019868 0.9466598286406389 0.8297745525683465 0.9395306238282245 0.9391336296671261 0.9544027865787638 0.98797854094587 0.977760458218585 1.0 23.20093301040051 -6.960530481924808 1.5350388996840265 0.9899851695554804 0.9227559808674193 0.3525420236579968 0.03699788747402108 0.47736947183532225 2.203576060676978 0.025327032234286197 0.012648861580795487 1.0951396878527989e-07 6.960530481924808 -0.06722918868806116 EVPWS(ph)PSAEKAS(ph)PQENGPAVHK ddPTM_KYSE-520_SHP099_60min_R1 4 EVPWSPSAEKASPQENGPAVHK 22 1 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 2 EVPWS(0.999)PS(0.002)AEKAS(0.999)PQENGPAVHK;EVPWS(0.993)PS(0.007)AEKAS(1)PQENGPAVHK;EVPWS(0.998)PS(0.025)AEKAS(0.977)PQENGPAVHK;EVPWS(0.998)PS(0.002)AEKAS(1)PQENGPAVHK 164.35 2.4719e-09 4550870000.0 2413570.0 2360950.0 2256230.0 2431350.0 2366730.0 2312950.0 2152300.0 2419090.0 2840520.0 2522240.0 True False 2279684.4607674885 2247526.418141799 2401670.1958956383 2662424.772987969 2552978.1861483604 2298514.021104762 2369875.4884237614 2410698.7414098512 2324753.171682069 2499894.915873025 0.9119121153024011 0.8990483575414238 0.9607084604421925 1.0650146756501502 1.0212342006611095 0.919444256040684 0.9479900428519182 0.9643200304553504 0.9299403574610686 1.0 21.25343602119746 -4.838685447976803 5.076547997591952 0.9773913070753243 0.9055662173599528 0.3252854433615998 0.04113497291473219 0.24482781592699285 11.092672025414899 0.01202577869972443 0.026642546802428443 1.4498215541729726e-05 4.838685447976803 -0.07182508971537149 EVPWSPSAEKAS(ph)PQENGPAVHK ddPTM_KYSE-520_SHP099_60min_R1 3 EVPWSPSAEKASPQENGPAVHK 22 1 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 EVPWSPS(0.004)AEKAS(0.995)PQENGPAVHK;EVPWS(0.001)PS(0.015)AEKAS(0.984)PQENGPAVHK;EVPWSPSAEKAS(1)PQENGPAVHK 135.8 7.2452e-07 4226460000.0 1114620.0 1108830.0 1000950.0 1112120.0 1025030.0 967060.0 931820.0 1018750.0 1164770.0 1034330.0 True False 1052789.8066601178 1055560.1424122388 1065472.8385766244 1217815.5504289304 1105694.0293770963 961024.219827306 1026017.4592868236 1015216.1940280363 953277.1294622549 1025166.6408965642 1.026945049381821 1.0296473766343917 1.039316727712492 1.1879196043327007 1.078550535364774 0.9374322002780326 1.0008299317948108 0.9902938249533503 0.9298752919121149 1.0 19.96742700827883 -6.250135731682389 24.662878808441544 0.972901094402632 1.074667873320776 0.5209892295393586 0.04829201582391023 543.7125296228841 1186300.8865259292 0.01717979776833432 0.017026368784065177 5.62165602009185e-07 6.250135731682389 0.10176677891814401 EVQAEQPSSS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 EVQAEQPSSSSPR 13 0 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 EVQAEQPSS(0.001)S(0.761)S(0.239)PR 106.76 0.0016973 2870500000.0 2522100.0 2154900.0 2248800.0 1870100.0 1846000.0 2152400.0 2018100.0 2384500.0 2716700.0 2265900.0 True False 2382194.085318299 2051375.3694291548 2393761.246207216 2047833.7417339338 1991269.697696767 2138966.0732077565 2222109.242757981 2376228.726046483 2223415.7624338795 2245825.8888435233 1.060720734030276 0.913416921418383 1.0658712494581988 0.911839939109641 0.8866536393532097 0.9524184772441137 0.9894396773127614 1.0580645355682983 0.9900214319725454 1.0 21.098814654213765 -6.998242139203143 6.091174173672175 1.0193192774243274 0.9619417541163483 0.13122796958967986 0.05824249401729644 0.28257106128727816 43.773740479757784 0.02597172430225899 0.016389772269186618 1.0040558267601e-07 6.998242139203143 -0.05737752330797907 EVQAEQPSSSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 EVQAEQPSSSSPR 13 0 Q9Y388;A0A1W2PP04 Q9Y388 RBMX2 RNA-binding motif protein, X-linked 2 1 EVQAEQPSSS(0.001)S(0.999)PR;EVQAEQPSSS(0.048)S(0.952)PR;EVQAEQPSSS(0.057)S(0.943)PR;EVQAEQPSSSS(1)PR;EVQAEQPSSSS(1)PR;EVQAEQPSSSS(1)PR;EVQAEQPSSSS(1)PR;EVQAEQPS(0.001)S(0.008)S(0.073)S(0.918)PR 314.68 1.0205e-45 21896360000.0 19795880.0 18763430.0 17256740.0 14984980.0 16395460.0 17855930.0 16558310.0 18082090.0 21499730.0 16826780.0 True False 18697763.074291583 17862006.65831736 18369137.07216026 16409147.993801488 17685689.424593426 17744484.517549057 18232185.568332516 18019367.45018152 17595920.99608811 16677707.820236726 1.1211230749350174 1.0710108877578253 1.1014185684360744 0.9838970781039006 1.0604388573790469 1.063964227507206 1.0932069181719077 1.0804462846097367 1.0550563174357344 1.0 23.99141768299305 -10.029051190068975 0.007298505836826764 7.898695292404656e-08 2.0654410178831357 0.25375069964404684 0.03501778758653114 17851.200235747547 24.615957186212675 3637.140948734084 3332.7234580920235 9.352954248556906e-11 10.029051190068975 2.0654409388961827 EVQQLLPEPVLGAT(ph)EPLT(ph)S(ph)GQLLMK ddPTM_KYSE-520_SHP099_60min_R1 1 EVQQLLPEPVLGATEPLTSGQLLMK 25 0 H0Y9W3;A0A0U1RRL8;Q8TB22-4;Q8TB22-3;Q8TB22;Q8TB22-2 H0Y9W3 SPATA20 Spermatogenesis-associated protein 20 3 EVQQLLPEPVLGAT(1)EPLT(1)S(1)GQLLMK 54.683 0.031097000000000003 254000000.0 73117.0 47205.0 71632.0 55805.0 44683.0 35664.0 59083.0 58417.0 90244.0 62225.0 True False 69061.05425487417 44937.20094385044 76249.51333525241 61108.690421614934 48199.29788850742 35441.407747110934 65055.68623451247 58214.36506163032 73857.96446611074 61673.73491031746 1.119780638472746 0.7286278512108215 1.236336885485049 0.9908381665303038 0.7815206580012737 0.5746596634474607 1.0548361685750482 0.9439085397743859 1.197559456606786 1.0 15.912368596928024 -9.620939482791993 8.376605566354739 0.9999999958042215 0.9469097652157624 0.0007214553201448926 0.20090673804879428 0.0 0.0 0.19724916701821227 0.04783995001065816 2.3936492786700636e-10 9.620939482791993 -0.053090230588459075 EVQTPQYLNPFDEPEAFVT(ph)IKDSPPQSTKR ddPTM_KYSE-520_SHP099_60min_R1 1 EVQTPQYLNPFDEPEAFVTIKDSPPQSTKR 30 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 EVQTPQYLNPFDEPEAFVT(0.26)IKDS(0.22)PPQS(0.26)T(0.26)KR 55.783 0.048178 398820000.0 80275.0 92774.0 80336.0 75288.0 69594.0 65319.0 64264.0 70591.0 129570.0 84076.0 True False 75821.98572575484 88316.99778338686 85514.58710214465 82443.34888383736 75070.65186430606 64911.31989214717 70760.43227619966 70346.1362970632 106043.35419389614 83331.15205013825 0.9098876453806215 1.0598317149179548 1.026201906469416 0.9893460831338715 0.9008714030395013 0.7789562281953293 0.8491474140862099 0.8441757322008187 1.272553559923095 1.0 16.346568304991397 -1.0002790441584368 24.99873693411762 0.9539290482132018 0.00010826544808462124 0.0 0.1340643305003481 0.0 0.0 0.03128092589232499 0.0 0.09993576834541451 1.0002790441584368 -0.9538207827651172 EVQTPQYLNPFDEPEAFVTIKDS(ph)PPQSTK ddPTM_KYSE-520_SHP099_60min_R1 3 EVQTPQYLNPFDEPEAFVTIKDSPPQSTK 29 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 EVQTPQYLNPFDEPEAFVT(0.047)IKDS(0.825)PPQS(0.064)T(0.064)K;EVQTPQYLNPFDEPEAFVT(0.05)IKDS(0.937)PPQS(0.006)T(0.008)K;EVQTPQYLNPFDEPEAFVT(0.07)IKDS(0.924)PPQS(0.003)T(0.003)K 170.48 2.0823e-10 456033000.0 379958.0 442260.0 316763.0 299978.0 301954.0 401160.0 306398.0 406250.0 479340.0 394650.0 True False 358880.9723125054 421013.16575420636 337182.04981871997 328487.81892832596 325716.0619167554 398656.2116372533 337371.69999631296 404840.8135694624 392303.93917806685 391153.70803305425 0.9174934685322691 1.076336890352651 0.8620193108081864 0.8397921640067062 0.8327060570501633 1.0191804486321399 0.8625041590243688 1.0349916292631733 1.0029406116352486 1.0 18.577376115834035 -7.274561786661553 24.691851842791717 1.0142245995152679 0.9176973979084758 0.26132971745281697 0.07460923407837947 1019.2187202787758 1917807.2691855377 0.04232692195094501 0.020524398372424934 5.314203894565438e-08 7.274561786661553 -0.09652720160679207 EVQTPQYLNPFDEPEAFVTIKDS(ph)PPQSTKR ddPTM_KYSE-520_SHP099_60min_R1 1 EVQTPQYLNPFDEPEAFVTIKDSPPQSTKR 30 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1;B5MC86 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 EVQTPQYLNPFDEPEAFVT(0.046)IKDS(0.847)PPQS(0.053)T(0.053)KR 71.036 0.013863 199430000.0 198770.0 214960.0 184000.0 163360.0 156510.0 169390.0 129810.0 161110.0 271510.0 155130.0 True False 187743.83186182842 204632.998938462 195860.93441040933 178885.68528402524 168826.446579914 168332.77417797004 142932.46162351378 160551.14701335662 222210.62821011615 153755.66888931385 1.2210530721763637 1.330897263279274 1.2738452886014002 1.1634412348906762 1.0980177043192427 1.0948069452915588 0.9296077514150616 1.0441966021359168 1.445219092182428 1.0 17.230280077264172 -5.4234204207338745 2.5145133467401926 1.095280423161666 1.2832484185985222 0.2618905159963074 0.1295664578104759 0.39349320495977835 4.861291793379443 0.04024340654991684 0.06445649313455747 3.7720685732135413e-06 5.4234204207338745 0.18796799543685627 EVRPS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 2 EVRPSPSK 8 1 Q92833-2;Q92833-3;Q92833 Q92833-2 JARID2 Protein Jumonji 1 EVRPS(0.9)PS(0.1)K;EVRPS(0.78)PS(0.22)K 117.94 0.0015316 680850000.0 1440160.0 1396550.0 1138190.0 1119150.0 1116810.0 1140270.0 1178820.0 1269450.0 1347790.0 1313840.0 True False 1360271.4539122174 1329457.6417357146 1211559.5485683884 1225513.6795152817 1204696.5932203282 1133153.1519683192 1297986.6297745225 1265046.5742418575 1103065.3110210032 1302200.3997520516 1.0445945602314537 1.0209316799387045 0.9303940843506715 0.9411098934915305 0.9251238084781046 0.8701833851257301 0.9967641155859487 0.9714684271965602 0.8470780006142179 1.0 20.312520055831463 -4.705096090515303 4.233794204598861 0.9336901270373255 1.0387432584334866 0.4157202518696971 0.046461632980077626 0.1909634455472642 6.853253407867674 0.011865708850775552 0.03328328340916749 1.971986372865843e-05 4.705096090515303 0.10505313139616113 EVRS(ph)PTKAPHLQLIEGK ddPTM_KYSE-520_SHP099_60min_R1 2 EVRSPTKAPHLQLIEGK 17 2 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 EVRS(0.994)PT(0.006)KAPHLQLIEGK;EVRS(0.995)PT(0.005)KAPHLQLIEGK 214.92 3.2419999999999998e-18 1246190000.0 955710.0 1240150.0 1366480.0 819210.0 1077220.0 991840.0 795080.0 833010.0 2197900.0 934760.0 True False 902694.8611393472 1180571.3324968985 1454565.4872453054 897067.4720955322 1161991.0854566141 985649.5586556337 875454.4456330272 830120.4827359949 1798816.7645501608 926478.753632275 0.9743287232441298 1.2742562394101855 1.5699933555331493 0.9682547695546871 1.2542015463398477 1.0638663377777187 0.9449266291329336 0.8959951639273906 1.9415628879754343 1.0 19.82139836663019 -5.322009265780783 24.998812197115882 1.1402256633339358 1.2730099542105153 0.028817706708630375 0.3139110825745328 963.5147215302842 397666.0978086468 0.0873597707171824 0.12957553324146184 4.764208221402546e-06 5.322009265780783 0.1327842908765795 EVS(ph)DDEAEEKEDKEEEK ddPTM_KYSE-520_SHP099_60min_R1 3 EVSDDEAEEKEDKEEEK 17 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EVS(1)DDEAEEKEDKEEEK;EVS(1)DDEAEEKEDKEEEK;EVS(1)DDEAEEKEDKEEEK 225.3 1.5828000000000002e-18 3198180000.0 4805770.0 3542250.0 2944530.0 4106330.0 4079660.0 3738590.0 4573280.0 4821500.0 3758730.0 3838960.0 True False 4539184.358035013 3372074.992974353 3134339.1152145783 4496594.368586871 4400706.031909854 3715256.073050455 5035591.77331163 4804775.341846558 3076239.381872529 3804949.8010656848 1.1929682638030297 0.8862337663508484 0.823753079301261 1.1817749520184133 1.1565740054382085 0.9764270929434842 1.323431854975135 1.2627697060552137 0.8084835655416375 1.0 21.859445989615065 -5.278726450137823 24.75822363423636 1.1186494255201793 0.9595098904039182 0.11289939281437711 0.16641498762703139 1300.615842309405 1862714.3681601826 0.04680555065514736 0.06962013230789128 5.263486942190148e-06 5.278726450137823 -0.1591395351162611 EVS(ph)DDEAEEKEDKEEEKEK ddPTM_KYSE-520_SHP099_60min_R1 6 EVSDDEAEEKEDKEEEKEK 19 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 EVS(1)DDEAEEKEDKEEEKEK;EVS(1)DDEAEEKEDKEEEKEK;EVS(1)DDEAEEKEDKEEEKEK;EVS(1)DDEAEEKEDKEEEKEK;EVS(1)DDEAEEKEDKEEEKEK;EVS(1)DDEAEEKEDKEEEKEK 279.16 3.0467e-36 40045900000.0 13476100.0 9816150.0 8394160.0 11952890.0 11388660.0 11391540.0 13041410.0 13961250.0 11313560.0 10233190.0 True False 12728553.869060658 9344567.419658463 8935260.98473087 13088889.071832571 12284882.749388553 11320441.173382785 14359762.994696163 13912821.682330238 9259302.695638623 10142531.897901358 1.2549680885592667 0.921324922980227 0.8809694733698308 1.2904952336941486 1.2112244627922224 1.1161356244514404 1.4157966806757012 1.3717306312055089 0.9129182721677722 1.0 23.273914503987346 -5.270200911939911 24.591251253236862 1.2112412553114191 1.009311234088728 0.15725930941717248 0.1735240693349263 760.2617743553752 2133847.9223559787 0.048395270235172864 0.0730550473183752 5.367834138761861e-06 5.270200911939911 -0.2019300212226911 EVS(ph)DSEAGGGPQGER ddPTM_KYSE-520_SHP099_60min_R1 4 EVSDSEAGGGPQGER 15 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 EVS(0.794)DS(0.206)EAGGGPQGER;EVS(0.974)DS(0.026)EAGGGPQGER;EVS(0.998)DS(0.002)EAGGGPQGER;EVS(0.823)DS(0.177)EAGGGPQGER 269.87 4.652e-36 2430004000.0 3624571.0 3027338.0 2763963.0 2837625.0 3167631.0 3066619.0 3229604.0 3188911.0 3298775.0 2909000.0 True False 3423508.821226849 2881900.1383530176 2942132.477477166 3107312.026836932 3416905.538345018 3047479.093316439 3556083.890217597 3177849.412038419 2699800.615350539 2883228.5231677545 1.1873872617857908 0.9995392717559282 1.0204298597340091 1.0777196472178976 1.1850970226220299 1.0569675864500068 1.233368725941497 1.1021843695368863 0.9363810720019908 1.0 21.459253757934658 -7.752280618339606 24.74015595123594 0.9681905403049212 1.1053734664834713 0.3700950913048997 0.07281683149673744 167.0195325593573 451172.26146235166 0.052217414726116886 0.01910408204241444 1.768965576088983e-08 7.752280618339606 0.1371829261785501 EVS(ph)GHSVR ddPTM_KYSE-520_SHP099_60min_R1 2 EVSGHSVR 8 0 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 EVS(0.968)GHS(0.032)VR;EVS(0.921)GHS(0.079)VR 83.99799999999999 0.015546 337290000.0 980680.0 915670.0 865500.0 825620.0 821570.0 884420.0 878400.0 923380.0 1093360.0 936630.0 True False 926279.7254628877 871679.8387513094 921291.5148489636 904086.6765682946 886222.8849061402 878900.0067210579 967197.2443578664 920177.0102985123 894833.3853626485 928332.1868871136 0.9977890872973948 0.9389740559079708 0.992415783770507 0.9738827214425053 0.9546398341285844 0.9467516252648615 1.0418654636990183 0.9912152387865089 0.9639150704913148 1.0 19.824281614509477 -6.728936937576021 24.999955410828793 0.9985170252034552 0.9669669039753273 0.28413847770751366 0.0247418710551879 256.95580973947233 197642.83255149866 0.009400953359816682 0.0072814038780079325 1.866650721156217e-07 6.728936937576021 -0.03155012122812795 EVS(ph)PAPAVAGQSK ddPTM_KYSE-520_SHP099_60min_R1 3 EVSPAPAVAGQSK 13 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK;EVS(1)PAPAVAGQSK 269.79 9.6676e-18 452010000.0 1370430.0 1483410.0 1099650.0 920770.0 996570.0 1381500.0 1007900.0 1306470.0 1530650.0 1377820.0 True False 1294409.5160155238 1412144.7569561957 1170535.1985022076 1008279.7039604061 1074994.3892923456 1372877.5460585954 1109788.3681560708 1301938.1605023895 1252722.5445464768 1365613.5867277398 0.9478592836185572 1.0340734529010898 0.8571496431190497 0.7383345580036509 0.7871878251213281 1.0053191908761405 0.8126664665187807 0.9533722959084434 0.917333099730085 1.0 20.381117886498437 -9.727745545234193 10.890855027689133 1.000000000000025 0.8925879670526237 0.10712017453298817 0.09090383455295081 0.0 0.0 0.09380014737237127 0.02274987737145822 1.8717785011976e-10 9.727745545234193 -0.10741203294740143 EVS(ph)PEVVR ddPTM_KYSE-520_SHP099_60min_R1 2 EVSPEVVR 8 0 Q5T200-2;Q5T200;A0A087WX14 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 EVS(1)PEVVR;EVS(1)PEVVR 114.51 0.0023265 2364800000.0 4973100.0 4500600.0 4424400.0 3879500.0 4282100.0 4310300.0 3926800.0 4349900.0 5175700.0 4383300.0 True False 4697232.229370935 4284384.420461676 4709603.903290291 4248206.513585797 4619076.9081838215 4283397.818875397 4323759.265874849 4334811.2121742945 4235923.348779413 4344467.372155793 1.081198643469175 0.9861702375579581 1.0840463283197157 0.9778428860607992 1.0632090225347377 0.9859431437621563 0.995233453377124 0.9977773662098636 0.9750155740443462 1.0 22.050747884073555 -6.146884539871801 0.7880146855931167 0.9867773740147026 1.0425186075140347 0.28739630491821255 0.03484615925515946 0.861291770036777 1.180099615939897 0.021112120276502368 0.02296432948240061 7.130425721250083e-07 6.146884539871801 0.05574123349933213 EVS(ph)PLLPK ddPTM_KYSE-520_SHP099_60min_R1 7 EVSPLLPK 8 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 EVS(1)PLLPK;EVS(1)PLLPK;EVS(1)PLLPK;EVS(1)PLLPK;EVS(1)PLLPK;EVS(1)PLLPK;EVS(1)PLLPK 142.92 0.00056809 4343100000.0 8948720.0 8818650.0 7908620.0 6728700.0 7115470.0 7801540.0 7193420.0 9124350.0 9914340.0 8944430.0 True False 8452316.662768941 8394988.816936482 8418422.299439397 7368193.624942583 7675417.0075137755 7752847.695025668 7920601.094613802 9092699.759489303 8114145.776172819 8865189.308861243 0.9534276560028321 0.9469610320160033 0.949604346409695 0.831137764602237 0.8657927924722121 0.8745270320709645 0.8934497413040833 1.0256633493884504 0.9152817264784504 1.0 23.079720008348783 -7.240853388524107 24.721294684409642 0.9778544051084047 0.9004893818720656 0.38092964011116814 0.0456102179270749 763.7480765487466 917171.0542055398 0.023024781234005816 0.013272784594003573 5.74310308260168e-08 7.240853388524107 -0.07736502323633909 EVS(ph)PPGAR ddPTM_KYSE-520_SHP099_60min_R1 2 EVSPPGAR 8 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 EVS(1)PPGAR;EVS(1)PPGAR 64.711 0.055994 0.0 472750.0 416040.0 455990.0 426320.0 374600.0 462370.0 450510.0 431650.0 557190.0 414460.0 True False 446525.6150962388 396052.8139112288 485383.845009796 466837.3246222182 404078.88881755684 459484.1773225575 496051.9473538962 430152.70689786755 456018.341616863 410788.2068450006 1.0869971621768653 0.9641289776867138 1.181591479311727 1.136442859953782 0.983667208757102 1.118542766481928 1.2075613152669387 1.0471398636333626 1.1101057284950946 1.0 18.648035238930177 EVS(ph)PSDVR ddPTM_KYSE-520_SHP099_60min_R1 1 EVSPSDVR 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 EVS(0.997)PS(0.003)DVR 109.29 0.0011371999999999999 580710000.0 2020000.0 1854900.0 1583200.0 1668100.0 1789300.0 1779500.0 1911500.0 1962100.0 1915300.0 1919400.0 True False 1907946.5732298307 1765787.819738337 1685255.6052095664 1826635.722467447 1930107.7302756384 1768393.4804279907 2104733.074442237 1955293.9330575815 1567529.8007838947 1902395.609270602 1.0029178809771102 0.928191702679212 0.8858597007883711 0.9601765865974626 1.0145669601369935 0.9295613760935934 1.1063592999193335 1.0278061637280909 0.8239767759897751 1.0 20.859385859783817 -5.525299259547447 23.691233264264387 0.9884219271406898 0.93542798910601 0.06746804991190092 0.07338187328818652 97.47979424822083 954079.42478092 0.02181754250256915 0.02837881758752667 2.983326188200768e-06 5.525299259547447 -0.05299393803467978 EVS(ph)SRPS(ph)TPGLSVVSGISATSEDIPNK ddPTM_KYSE-520_SHP099_60min_R1 3 EVSSRPSTPGLSVVSGISATSEDIPNK 27 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 2 EVS(0.5)S(0.5)RPS(0.553)T(0.448)PGLSVVSGISATSEDIPNK;EVS(0.543)S(0.456)RPS(0.544)T(0.457)PGLSVVSGISATSEDIPNK;EVS(0.5)S(0.5)RPS(0.52)T(0.461)PGLS(0.018)VVS(0.001)GISATSEDIPNK 219.47 1.3482e-22 5801310000.0 2088840.0 1776300.0 1638440.0 1757730.0 2014530.0 1809680.0 1855900.0 2009650.0 2108920.0 1939280.0 True False 1972967.8812006954 1690963.8817193415 1744056.4639966884 1924784.1307192037 2173062.049892235 1798385.115853289 2043512.4838385293 2002678.9932058381 1725993.289546898 1922099.4879370078 1.0264650157720425 0.8797483649164568 0.9073705471242733 1.001396724154522 1.1305668949657677 0.9356358123707209 1.063166863455041 1.041922650609161 0.8979729199134272 1.0 20.874251581314457 -5.355759343504049 5.937564730302931 1.0167377346310453 0.9324457878342809 0.17912202021594614 0.07003428076717849 0.3391292321457531 17.365513788973264 0.019469540075495787 0.029126034779521547 4.407990567320581e-06 5.355759343504049 -0.08429194679676444 EVS(ph)SRPS(ph)TPGLSVVSGISATSEDIPNKIEDLR ddPTM_KYSE-520_SHP099_60min_R1 6 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 2 EVS(0.434)S(0.434)RPS(0.467)T(0.467)PGLS(0.18)VVS(0.01)GIS(0.002)AT(0.002)S(0.002)EDIPNKIEDLR;EVS(0.5)S(0.5)RPS(0.528)T(0.472)PGLSVVSGISATSEDIPNKIEDLR;EVS(0.5)S(0.5)RPS(0.52)T(0.48)PGLSVVSGISATSEDIPNKIEDLR;EVS(0.501)S(0.501)RPS(0.673)T(0.325)PGLSVVSGISATSEDIPNKIEDLR;EVS(0.5)S(0.5)RPS(0.526)T(0.474)PGLSVVSGISATSEDIPNKIEDLR;EVS(0.5)S(0.5)RPS(0.54)T(0.46)PGLSVVSGISATSEDIPNKIEDLR 153.24 3.3787e-07 28674520000.0 1389200.0 1432890.0 1339230.0 1296750.0 1222424.0 1277402.0 1080984.0 1258527.0 1751250.0 1183738.0 True False 1312138.3066984569 1364051.8135882597 1425558.9086437619 1419992.7301178956 1318621.8141588697 1269429.260289787 1190260.4121071773 1254161.4635794095 1433267.1454199306 1173251.0022542274 1.1183781681646794 1.1626257390510957 1.2150502372508205 1.2103060022020784 1.1239042725088952 1.0819758584060593 1.0144976734051527 1.0689626185443053 1.2216202182364395 1.0 20.16208026211872 -6.013154186969872 3.6613985895594445 1.0787243776724367 1.1781122866173444 0.3682726189961253 0.06100031951286948 0.264206939654481 7.661856405544915 0.02082874158570029 0.022322317289906992 9.701654695895953e-07 6.013154186969872 0.09938790894490768 EVS(ph)SRPST(ph)PGLSVVSGISATSEDIPNK ddPTM_KYSE-520_SHP099_60min_R1 1 EVSSRPSTPGLSVVSGISATSEDIPNK 27 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 2 EVS(0.477)S(0.477)RPS(0.47)T(0.561)PGLS(0.015)VVSGISATSEDIPNK 90.633 0.0016358 476290000.0 226900.0 198940.0 185170.0 219820.0 226940.0 205600.0 224130.0 227320.0 230810.0 207870.0 True False 214313.40468606385 189382.6237849722 197106.35448247558 240711.6267087072 244798.88688803054 204316.7741365523 246787.24769800605 226531.47997688668 188900.72224660937 206028.43352041286 1.040212756191393 0.9192062500742577 0.9566949139714092 1.168341779800301 1.1881801104107137 0.9916921205747508 1.1978310152688458 1.0995156159086286 0.9168672450634998 1.0 17.65248392868105 -5.239382326657173 24.44563812281996 1.0901876062191707 0.9667547725275012 0.22334026041427424 0.09111420167329794 820.5525354295169 909408.841197533 0.02464093856037184 0.04263367792147247 5.7625893642996045e-06 5.239382326657173 -0.12343283369166946 EVSDS(ph)EAGGGPQGER ddPTM_KYSE-520_SHP099_60min_R1 1 EVSDSEAGGGPQGER 15 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 EVS(0.384)DS(0.616)EAGGGPQGER 205.12 4.1252e-11 0.0 289170.0 277920.0 245110.0 235080.0 237320.0 254140.0 237910.0 258600.0 317650.0 233690.0 True False 273129.1636538967 264568.3060335749 260910.18278986632 257421.9325206211 255995.7338339094 252553.8179915533 261960.264577846 257702.97695769396 259972.7673048629 231619.68840806876 1.1792139326804392 1.1422530953735552 1.126459432629032 1.1113991832468655 1.1052416812809747 1.0903814771851463 1.1309930791216811 1.1126125707572472 1.1224122141414918 1.0 17.82139836663019 -13.999999999999998 0.16983142696859416 0.5343540462067669 1.151325940695289 0.7761410191452784 0.020715025918438195 67.98219466258335 0.6405496999837578 10.715734356923642 0.0822203272607986 1.0000000000000041e-14 13.999999999999998 0.6169718944885221 EVSFQSTGESEWK ddPTM_KYSE-520_SHP099_60min_R1 1 EVSFQSTGESEWK 13 0 Q07021;I3L3Q7;I3L3B0 Q07021 C1QBP Complement component 1 Q subcomponent-binding protein, mitochondrial 0 207.66 8.0889e-09 0.0 198090.0 235830.0 145430.0 140340.0 197090.0 215170.0 158340.0 171480.0 207800.0 172500.0 False True 187101.55281737502 224500.3728119534 154804.6504962273 153677.8714052406 212599.86171129814 213827.04421674102 174346.55244948162 170885.17590373277 170068.75821171256 170971.78420296905 1.094341699068061 1.3130843422996505 0.9054397555590287 0.8988493166966195 1.243479224963286 1.2506569151954126 1.0197387438064414 0.9994934351323522 0.9947182747406761 1.0 17.38339872849988 -6.972297764150972 24.747608352133305 1.0001866044219905 1.11453345321147 0.16033320141820773 0.12855232807145994 401.279681467765 358479.7794846465 0.05834960674744898 0.039338335666785754 1.0658650844545491e-07 6.972297764150972 0.11434684878947943 EVSKPVGGAEGVEVPRS(ph)PVLLCK ddPTM_KYSE-520_SHP099_60min_R1 7 EVSKPVGGAEGVEVPRSPVLLCK 23 2 Q8TED9;Q8TED9-2;Q8TED9-3 Q8TED9 AFAP1L1 Actin filament-associated protein 1-like 1 1 EVSKPVGGAEGVEVPRS(1)PVLLCK;EVSKPVGGAEGVEVPRS(1)PVLLCK;EVSKPVGGAEGVEVPRS(1)PVLLCK;EVSKPVGGAEGVEVPRS(1)PVLLCK;EVSKPVGGAEGVEVPRS(1)PVLLCK;EVSKPVGGAEGVEVPRS(1)PVLLCK;EVSKPVGGAEGVEVPRS(1)PVLLCK 201.25 7.3625e-21 14109060000.0 11643710.0 10479700.0 10566140.0 9680730.0 10126110.0 11675690.0 11026070.0 11776360.0 14366850.0 12435140.0 True False 10997810.19513958 9976239.481649596 11247250.290821748 10600783.668582404 10922977.247315405 11602817.687832698 12140692.759673206 11735510.555783084 11758192.198815892 12324974.333992511 0.892319115408412 0.8094328808567933 0.9125577048709643 0.8601059427235677 0.8862474639958988 0.9414070466525767 0.9850481169919314 0.952173224687075 0.9540135241001335 1.0 23.555081306493403 -6.296118140313277 2.3611888756565915 0.9689847895953817 0.8674696289195135 0.745202166696409 0.028127481417079013 0.1520795031716178 1.6680541536163036 0.01060278498493985 0.009566991566471896 5.056870821827567e-07 6.296118140313277 -0.10151516067586819 EVSS(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 3 EVSSLK 6 0 P35579;P35579-2 P35579 MYH9 Myosin-9 1 EVS(0.014)S(0.986)LK;EVS(0.001)S(0.999)LK;EVS(0.025)S(0.975)LK 119.86 0.0081912 916360000.0 5840270.0 4551020.0 4031410.0 4011420.0 4257640.0 4106070.0 3899960.0 3970190.0 4366300.0 4394170.0 True False 5516298.580810387 4332382.167979714 4291281.139084061 4392664.150722598 4592692.045342183 4080442.4940606738 4294206.016741692 3956418.3375393166 3573489.985465841 4355241.072412531 1.2665885743391703 0.9947514031823377 0.9853142610787695 1.0085926536988081 1.054520741557509 0.9369039339538475 0.9859858376020896 0.9084269439412934 0.8205033719261724 1.0 22.054321146781675 -1.3902315721437668 1.077776255618813 0.9571944687394173 199.98506795788305 0.6862589815218729 0.06110089251402169 647.2707435870261 1.547869291363008 0.020134794654697745 317454.6116773288 0.04071631146084439 1.3902315721437668 199.02787348914362 EVSS(ph)RPS(ph)TPGLSVVSGISATSEDIPNK ddPTM_KYSE-520_SHP099_60min_R1 4 EVSSRPSTPGLSVVSGISATSEDIPNK 27 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 2 EVS(0.137)S(0.863)RPS(0.548)T(0.452)PGLSVVSGISATSEDIPNK;EVS(0.458)S(0.542)RPS(0.542)T(0.457)PGLS(0.001)VVSGISATSEDIPNK;EVS(0.287)S(0.637)RPS(0.578)T(0.497)PGLS(0.001)VVSGISATSEDIPNK;EVS(0.467)S(0.532)RPS(0.531)T(0.466)PGLS(0.003)VVSGISATSEDIPNK 209.98 2.3483e-22 10921400000.0 2247870.0 2190700.0 1836920.0 2195260.0 1980450.0 2066090.0 2027760.0 2256020.0 2420130.0 2214190.0 True False 2123176.17008225 2085455.4836922633 1955330.8023759155 2403896.850371013 2136300.147780914 2053194.7659328296 2232745.7698304965 2248194.3931790246 1980695.398512571 2194573.999213755 0.9674662011137084 0.9502780423168298 0.8909842197512807 1.0953819972496948 0.9734463948567152 0.9355778236087837 1.0173937040311318 1.0244331674322578 0.9025420875405386 1.0 21.06550948682125 EVSS(ph)RPS(ph)TPGLSVVSGISATSEDIPNKIEDLR ddPTM_KYSE-520_SHP099_60min_R1 6 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 2 EVS(0.495)S(0.505)RPS(0.504)T(0.495)PGLSVVSGISATSEDIPNKIEDLR;EVS(0.474)S(0.526)RPS(0.526)T(0.474)PGLSVVSGISATSEDIPNKIEDLR;EVS(0.468)S(0.532)RPS(0.596)T(0.404)PGLSVVSGISATSEDIPNKIEDLR;EVS(0.03)S(0.97)RPS(0.54)T(0.461)PGLSVVSGISATSEDIPNKIEDLR;EVS(0.128)S(0.872)RPS(0.552)T(0.449)PGLSVVSGISATSEDIPNKIEDLR;EVS(0.137)S(0.86)RPS(0.576)T(0.427)PGLSVVSGISATSEDIPNKIEDLR 191.33 1.3485e-15 30409290000.0 1450340.0 1461030.0 1336000.0 1526730.0 1423940.0 1311830.0 1216770.0 1357440.0 1834210.0 1277000.0 True False 1369886.749018889 1390839.9257492602 1422120.6976755795 1671829.9601718872 1535995.976889671 1303642.382371369 1339772.986130829 1352731.3574688775 1501163.7006713457 1265686.7734909675 1.0823268265974852 1.0988816150089806 1.1235960803739318 1.320887596510716 1.2135672182566524 1.0299881532108563 1.0585343974445747 1.0687726108868365 1.186046763000371 1.0 20.271488986537076 -6.261851263381147 24.99999712021873 1.0723332983561857 1.1700635170811338 0.2909082565264437 0.07728088387252421 57.0846392044859 3464768.0614918056 0.02863792191475491 0.026836148750126264 5.472033363053748e-07 6.261851263381147 0.09773021872494803 EVSS(ph)RPST(ph)PGLSVVSGISATSEDIPNK ddPTM_KYSE-520_SHP099_60min_R1 1 EVSSRPSTPGLSVVSGISATSEDIPNK 27 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 2 EVS(0.458)S(0.533)RPS(0.238)T(0.76)PGLS(0.011)VVSGISATSEDIPNK 113.41 0.00036606 317440000.0 260420.0 261570.0 219270.0 262150.0 210400.0 230620.0 218190.0 228820.0 280520.0 252280.0 True False 245973.9834656007 249003.78457542567 233404.49504440473 287064.65718172875 226957.28298775703 229180.6150358548 240246.7745291924 228026.27682698955 229584.63933373257 250044.9954708697 0.9837188822851555 0.9958359058797266 0.9334499760927885 1.1480520001655936 0.9076657685564341 0.9165574963989007 0.9608141689729647 0.9119409744537544 0.918173302774537 1.0 17.931828204930767 EVSSLEGS(ph)PPPCLGQEEAVCTK ddPTM_KYSE-520_SHP099_60min_R1 2 EVSSLEGSPPPCLGQEEAVCTK 22 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 EVS(0.029)S(0.038)LEGS(0.933)PPPCLGQEEAVCTK;EVS(0.151)S(0.151)LEGS(0.698)PPPCLGQEEAVCTK 133.24 2.2010000000000002e-07 373040000.0 670930.0 752310.0 646730.0 523870.0 613390.0 692400.0 518120.0 721190.0 833180.0 678570.0 True False 633712.1754342037 716167.898359668 688419.2506045868 573658.4472927409 661660.3032883093 688078.4747672601 570496.6259639089 718688.3602170119 681895.5147585882 672558.3977194721 0.942241116285234 1.0648412105001857 1.0235828634939301 0.8529496460648123 0.9837960622183645 1.0230761776232575 0.8482484612464333 1.0685887837457066 1.013882983352489 1.0 19.359300015626506 EVSSRPS(ph)TPGLSVVSGISATSEDIPNK ddPTM_KYSE-520_SHP099_60min_R1 2 EVSSRPSTPGLSVVSGISATSEDIPNK 27 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 EVS(0.013)S(0.082)RPS(0.451)T(0.451)PGLS(0.003)VVSGISATSEDIPNK;EVS(0.058)S(0.058)RPS(0.432)T(0.432)PGLS(0.02)VVSGISATSEDIPNK 195.08 1.1607999999999999e-15 1349600000.0 501830.0 655490.0 421210.0 437680.0 475360.0 666300.0 522050.0 610190.0 585390.0 641400.0 True False 473992.4895266971 623999.2764894512 448361.87055982836 479276.97560671007 512768.1275715799 662141.374548564 574823.9087170131 608073.393309417 479097.9324810131 635717.6950016489 0.7456021646927221 0.981566631534195 0.7052845533246725 0.7539147948453235 0.8065972232694418 1.0415651157025707 0.9042125352756182 0.9565148148154659 0.7536331554838512 1.0 19.278026720388635 -6.112321745721312 11.551828750275387 0.9267434942260651 0.8004166931430404 0.3115638107811983 0.09846050436914698 0.7643976715301202 74.4296616515047 0.03211889224062505 0.032125356640928214 7.721083590703978e-07 6.112321745721312 -0.12632680108302463 EVSSRPS(ph)TPGLSVVSGISATSEDIPNKIEDLR ddPTM_KYSE-520_SHP099_60min_R1 4 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 EVS(0.005)S(0.005)RPS(0.463)T(0.463)PGLS(0.023)VVS(0.004)GIS(0.023)AT(0.011)S(0.002)EDIPNKIEDLR;EVSS(0.001)RPS(0.596)T(0.402)PGLSVVSGISATSEDIPNKIEDLR;EVSSRPS(0.568)T(0.432)PGLSVVSGISATSEDIPNKIEDLR;EVS(0.002)S(0.008)RPS(0.525)T(0.415)PGLS(0.032)VVS(0.016)GIS(0.002)AT(0.001)SEDIPNKIEDLR 210.06 1.9591999999999998e-22 6083160000.0 1284894.0 1677830.0 1159188.0 1076703.0 1085067.0 1454310.0 1108353.0 1270510.0 1770270.0 1176440.0 True False 1213618.3684473142 1597224.5283258264 1233911.1132463757 1179032.5293974394 1170455.5997132936 1445233.1118410972 1220396.1377228757 1266102.8973492628 1448833.5928751142 1166017.6568564705 1.0408233197078447 1.3698116138582923 1.0582267824082037 1.0111618142868062 1.0038060683135688 1.2394607434482412 1.0466360698284853 1.0858350985546972 1.242548587798492 1.0 20.15315820457476 -11.456527366245052 2.0100560307712203 3.770979038153461e-05 1.1208784851166995 0.09107000780186791 0.11560745532357712 2506048.0808473593 176615.03459419106 11469038.84315759 0.02975988920262941 3.4952048453266556e-12 11.456527366245052 1.120840775326318 EVSSRPST(ph)PGLSVVSGISATSEDIPNKIEDLR ddPTM_KYSE-520_SHP099_60min_R1 2 EVSSRPSTPGLSVVSGISATSEDIPNKIEDLR 32 2 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 EVSSRPS(0.103)T(0.897)PGLSVVSGISATSEDIPNKIEDLR;EVSSRPS(0.178)T(0.822)PGLSVVSGISATSEDIPNKIEDLR 238.79 3.8989000000000004e-31 953100000.0 294200.0 435320.0 325170.0 301190.0 245157.0 339660.0 260756.0 297060.0 414120.0 315410.0 True False 277880.1395268403 414406.57377135847 346130.97849039506 329815.0070439247 264449.461147479 337540.0559495203 287115.7612133194 296029.56819432543 338926.24711566133 312615.7127852668 0.8888873084818801 1.3256101879178765 1.1072091527534627 1.055017369745813 0.8459250457737778 1.0797283762296805 0.9184303586510281 0.9469439829394172 1.0841625460728745 1.0 18.25403076777017 -5.525996957385328 24.96967981975085 0.975982540912665 1.1210797402662187 0.1913411829112146 0.1183434900489881 128.77565262065218 1031186.9664739313 0.033294020978399216 0.043219755196055996 2.9785372966285515e-06 5.525996957385328 0.1450971993535537 EVSTYIK ddPTM_KYSE-520_SHP099_60min_R1 5 EVSTYIK 7 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ;;;; 131.04 0.015169 3787510000.0 4892120.0 5563030.0 3741930.0 3543000.0 5222810.0 5281200.0 4325200.0 4614870.0 4470120.0 4707820.0 False True 4620744.351400554 5295773.688521738 3983140.7950996845 3879725.6547582066 5633815.433276088 5248238.071838328 4762433.425884154 4598862.093088751 3658458.890555057 4666112.377428539 0.9902771252901142 1.1349434518849288 0.8536315615473378 0.8314685418906039 1.2073895734977653 1.124756038286972 1.0206426765290844 0.9855875129229422 0.7840486029123901 1.0 22.153789622554246 -7.540199420395504 23.529091123943253 0.8896219694470026 1.0231338054041457 0.15480359729767235 0.12110328639237397 238.4222984065047 323869.28999764187 0.08551684557162048 0.03234362453452752 2.8827075105333498e-08 7.540199420395504 0.1335118359571431 EVTWEVLEGEVEK ddPTM_KYSE-520_SHP099_60min_R1 4 EVTWEVLEGEVEK 13 0 P05455 P05455 SSB Lupus La protein 0 ;;; 265.6 2.643e-21 153800000.0 251913.0 298740.0 312708.0 184199.0 281801.0 315735.0 240896.0 280436.0 303223.0 305641.0 False True 237938.88371388434 284388.081982118 332865.6580304901 201705.21757855115 303977.13547163975 313764.3807490484 265248.11859839753 279463.2329702542 248165.34682978917 302933.25852509984 0.7854498541109168 0.9387813123152167 1.0988085615000578 0.6658404513277919 1.0034458974614484 1.0357541534946753 0.8755991992751767 0.9225241042561162 0.8192079933317298 1.0 18.208640452290158 EVVKGPCAPAASS(ph)PTQK ddPTM_KYSE-520_SHP099_60min_R1 2 EVVKGPCAPAASSPTQK 17 1 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 EVVKGPCAPAAS(0.12)S(0.835)PT(0.045)QK;EVVKGPCAPAAS(0.406)S(0.594)PTQK 117.31 7.963e-05 838510000.0 1612390.0 1970490.0 1470150.0 925320.0 1076560.0 1273690.0 870680.0 1024420.0 2137440.0 1324640.0 True False 1522947.5124802229 1875824.7026342098 1564918.2213231672 1013262.1345923967 1161279.147211502 1265740.4282586847 958696.831417927 1020866.5261214242 1749334.7764775879 1312904.7201543243 1.159983271521188 1.4287592038009562 1.1919510969076417 0.7717712633962452 0.8845113658171634 0.9640763787564907 0.7302105146710401 0.7775632994917006 1.332415635059918 1.0 20.324330790392306 -5.0984092995906725 5.052747801423257 0.9071064668065985 1.2984937446147173 0.45021268799116076 0.17229328729548532 0.17964139851812244 7.149590460567816 0.04629798359334349 0.08327572446745611 7.97242973741147e-06 5.0984092995906725 0.3913872778081189 EVVKGPGAPAAS(ph)SPTQK ddPTM_KYSE-520_SHP099_60min_R1 4 EVVKGPGAPAASSPTQK 17 1 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 EVVKGPGAPAAS(0.486)S(0.486)PT(0.028)QK;EVVKGPGAPAAS(0.499)S(0.499)PT(0.002)QK;EVVKGPGAPAAS(0.498)S(0.498)PT(0.004)QK;EVVKGPGAPAAS(0.499)S(0.499)PT(0.002)QK 154.84 1.6226e-06 4173940000.0 5924080.0 6596270.0 5394890.0 3521420.0 4104990.0 5076860.0 3018700.0 3877860.0 8399300.0 4999260.0 True False 5595459.4730393 6279375.287996871 5742653.241529193 3856094.6980464747 4428029.358801869 5045173.4335744 3323859.6556729125 3864408.6087593264 6874198.84912242 4954970.4457654245 1.129261926843831 1.2672881416201582 1.158968212703858 0.7782275878843915 0.8936540403759853 1.0182045460808073 0.6708132151451118 0.7799054809826151 1.387333975926575 1.0 22.240445021715793 -5.139754561252549 6.148188875433601 0.9150565633952976 1.200956270677798 0.27568609597742877 0.186533016625018 0.28364762782719805 13.079741187357817 0.050589304210542155 0.08891693165741499 7.248454861318654e-06 5.139754561252549 0.28589970728250047 EVVKPVPIT(ph)SPAVSK ddPTM_KYSE-520_SHP099_60min_R1 1 EVVKPVPITSPAVSK 15 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 EVVKPVPIT(0.498)S(0.498)PAVS(0.003)K 96.414 0.004067 2511900000.0 3592800.0 3445600.0 2956100.0 2457100.0 2518000.0 3211300.0 2718300.0 3273300.0 3570000.0 3288200.0 True False 3393500.2219307683 3280068.204048956 3146654.9359272327 2690622.0452459487 2716152.2745397943 3191257.085528751 2993092.2920514434 3261945.6862939615 2921777.9923763927 3259069.1061808853 1.0412483170408788 1.006443280944318 0.9655072762831396 0.8255799302147763 0.8334135257790517 0.9791928251771257 0.9183887160830644 1.0008826385754204 0.8965069156819002 1.0 21.63602851301999 -4.84631463321007 3.2834840199830793 0.9193844714915551 1.027606523556672 0.3206882865812506 0.058582017218387475 0.28227819951965455 5.976546481875218 0.016559107288860012 0.04178885530840071 1.4245751580698607e-05 4.84631463321007 0.10822205206511692 EVVKPVPITS(ph)PAVSK ddPTM_KYSE-520_SHP099_60min_R1 7 EVVKPVPITSPAVSK 15 1 Q96HC4;A0A0D9SFR4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 EVVKPVPIT(0.224)S(0.776)PAVSK;EVVKPVPIT(0.047)S(0.953)PAVSK;EVVKPVPIT(0.01)S(0.99)PAVSK;EVVKPVPIT(0.043)S(0.745)PAVS(0.212)K;EVVKPVPIT(0.072)S(0.928)PAVSK;EVVKPVPIT(0.001)S(0.999)PAVSK;EVVKPVPIT(0.002)S(0.935)PAVS(0.064)K 197.49 4.2630999999999995e-11 9109270000.0 18069590.0 17338230.0 15107130.0 12076180.0 12409230.0 16083700.0 13270200.0 16000160.0 18857040.0 16576960.0 True False 17067233.82186538 16505275.405586176 16080959.772062633 13223896.516364105 13385765.80213956 15983315.662354419 14611681.3206714 15944659.179425402 15433076.883294472 16430101.031079719 1.0387783854512178 1.004575405492897 0.9787499018809052 0.8048578941388947 0.8147098899038178 0.9728069007074183 0.889323887481365 0.9704541164575897 0.939317223558197 1.0 23.969838015868334 -5.01463367047832 20.56874276444848 0.9078965963489727 1.014173735239205 0.3406685338351281 0.06159568361394358 71.75867360302865 100868.1290426187 0.01737904058324372 0.03175749911217339 9.668660914052757e-06 5.01463367047832 0.10627713889023238 EVVNKDVLDVYIEHR ddPTM_KYSE-520_SHP099_60min_R1 1 EVVNKDVLDVYIEHR 15 1 P33993;P33993-2 P33993 MCM7 DNA replication licensing factor MCM7 0 104.44 0.00075271 164650000.0 216730.0 230830.0 155320.0 141760.0 164400.0 152480.0 136260.0 141410.0 173330.0 112190.0 False True 204707.5548594562 219740.58031710619 165332.1757207866 155232.82777830175 177337.34469195473 151528.31576041575 150034.4905694478 140919.48171534197 141857.6412937254 111196.08388249925 1.8409601103917508 1.9761539493540596 1.4868525036861269 1.396027830821237 1.5948164584586166 1.3627127005707818 1.3492785476868865 1.2673061567910195 1.2757431407712718 1.0 16.762746454379673 -1.0000000000198035 0.17002106612548584 0.9841228269279884 4.867770466191203 0.8311781843482409 0.11167217339462505 23.55794477710348 0.25467042718212685 0.29799006647053705 23.280775575922902 0.09999999999544008 1.0000000000198035 3.8836476392632147 EVVQGSGAPAALS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 EVVQGSGAPAALSPK 15 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 EVVQGSGAPAALS(1)PK;EVVQGSGAPAALS(1)PK;EVVQGSGAPAALS(1)PK 201.61 1.6335e-11 2820310000.0 1681070.0 1701790.0 1113120.0 942370.0 1192150.0 1507310.0 1093140.0 1811540.0 2024170.0 1738520.0 True False 1587817.6959700363 1620033.4539611316 1184873.4962549726 1031932.5614661284 1285965.4225943664 1497902.3191817447 1203645.259218303 1805256.1905566165 1656631.7531732565 1723118.065348091 0.9214793390546211 0.9401755379042265 0.6876333781664656 0.5988751335258419 0.7463013988740148 0.8692975538383378 0.6985274447663293 1.0476683094793813 0.9614151151265404 1.0 20.716590125475896 -7.26692469096857 24.976465719953662 1.0034062978000287 0.778044320474252 0.4942705023737092 0.10321219657221319 427.3531422645828 1945866.6593239827 0.05994521321092386 0.03009577633126098 5.408481008245509e-08 7.26692469096857 -0.22536197732577667 EVVQGSSAS(ph)AASSPTWK ddPTM_KYSE-520_SHP099_60min_R1 2 EVVQGSSASAASSPTWK 17 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 EVVQGSS(0.001)AS(0.671)AAS(0.227)S(0.102)PTWK;EVVQGS(0.027)S(0.011)AS(0.37)AAS(0.296)S(0.296)PTWK 240.68 2.7296999999999996e-23 1061290000.0 1765750.0 1867500.0 1359730.0 1205860.0 1386050.0 1893260.0 1647460.0 2094920.0 2435770.0 2032920.0 True False 1667800.3275646402 1777782.4968253514 1447380.3714449208 1320464.5718449722 1495124.2494542808 1881443.4620708618 1814001.334460167 2087653.2114780045 1993495.568764885 2014909.9103878294 0.8277294776140252 0.8823136397612755 0.7183350302576701 0.6553467055957899 0.7420303219246659 0.933760587692341 0.9002890526807764 1.0361025079658144 0.9893720600049941 1.0 20.94228390448323 -6.495186402217064 2.0980613433829793 0.9905973239650928 0.7634551296208429 0.7088313818584766 0.06632781551696014 0.2005637562372497 1.7652103609918868 0.032466706980221936 0.025453158127180107 3.1975224162316893e-07 6.495186402217064 -0.22714219434424987 EVVQGSSASAAS(ph)SPTWK ddPTM_KYSE-520_SHP099_60min_R1 2 EVVQGSSASAASSPTWK 17 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 EVVQGSSAS(0.454)AAS(0.468)S(0.075)PT(0.001)WK;EVVQGSSAS(0.123)AAS(0.692)S(0.184)PTWK 263.9 1.5709e-29 1068470000.0 1561860.0 1478740.0 1085730.0 1010240.0 1109390.0 1436040.0 1281780.0 1708160.0 2019340.0 1665400.0 True False 1475220.5123092805 1407699.1107660073 1155717.893029421 1106252.9058602673 1196692.681434353 1427077.1416880097 1411354.831367288 1702234.791647541 1652678.759418866 1650645.8516615946 0.8937232119320294 0.8528171620514303 0.7001610259802473 0.6701939757378463 0.7249845145339461 0.8645568280146021 0.8550318833967757 1.0312537907110817 1.0012315832346623 1.0 20.654599190570018 -6.972858049069465 1.639904144387418 1.0170666776031752 0.7684581769570796 0.6848602440841829 0.06873299314983697 0.2437533277969681 1.2874816178044353 0.049191590329307526 0.024730804433593673 1.0644908945784843e-07 6.972858049069465 -0.24860850064609552 EVVYWS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 EVVYWSPK 8 0 E6ZCI6;C0MHM2;Q86VZ5 E6ZCI6 SGMS1 Phosphatidylcholine:ceramide cholinephosphotransferase 1 1 EVVYWS(1)PK;EVVYWS(1)PK;EVVYWS(1)PK;EVVYWS(1)PK 119.27 0.0009619 690670000.0 1520710.0 1437520.0 1248810.0 1589220.0 1458330.0 1438090.0 1460130.0 1748730.0 1783550.0 1395610.0 True False 1436353.1848397711 1368459.3814384881 1329310.2907666473 1740258.9909835854 1573092.2742373392 1429114.3468776012 1607734.1898955484 1742664.0637866512 1459702.2796366694 1383245.9811681488 1.0383931740230132 0.9893102167431035 0.9610078820861978 1.2580979917353092 1.1372469507620513 1.0331599486526009 1.1622908808582402 1.2598367083741493 1.055273103634072 1.0 20.399626301558044 -5.237269478890711 24.989894690213223 1.1379271455477933 0.9955443887601246 0.34484468125253975 0.0835442693266915 830.0698460063129 858230.0192139966 0.02239759916482806 0.038771129026726824 5.790692735573374e-06 5.237269478890711 -0.14238275678766865 EVWDYVFFK ddPTM_KYSE-520_SHP099_60min_R1 3 EVWDYVFFK 9 0 A0A6I8PTV8;A0A6I8PIP7;A0A6I8PS05;A0A6I8PLB8;A0A6I8PRS0;A0A6I8PL42;B4DER1;A0A6I8PIT3;A0A6I8PIV1;Q9P2J5-2;Q9P2J5;A0A6I8PRP1;A0A6I8PLB3 A0A6I8PTV8 LARS Leucine--tRNA ligase, cytoplasmic 0 ;; 163.72 0.00093077 274708100.0 679568.0 583688.0 463419.0 446524.0 732140.0 594184.0 519391.0 453816.0 463628.0 405025.0 False True 641871.0083547779 555646.7523464501 493291.7302366158 488961.50670766435 789755.2526932354 590475.4772546364 571896.111047673 452241.81821745116 379444.8423107788 401436.79360468214 1.5989341748949528 1.3841450539624112 1.2288154401770868 1.2180286274136916 1.967321544200437 1.4709052250853505 1.4246230543851244 1.1265579673366952 0.9452169017781662 1.0 18.61481332710727 -7.357196898277234 2.551973083093997 0.9773704104255018 1.4722493435378095 0.5239560145366056 0.1988890764925983 0.2631230306749014 3.248065964008406 0.1498650278607826 0.05956160500584761 4.3934238340805206e-08 7.357196898277234 0.4948789331123077 EVY(ph)EYWIKK ddPTM_KYSE-520_SHP099_60min_R1 1 EVYEYWIKK 9 1 A0A590UJN0;Q9H2F5-3;Q9H2F5-2;Q9H2F5 A0A590UJN0 EPC1 Enhancer of polycomb homolog 1 1 EVY(0.5)EY(0.5)WIKK 54.549 0.038138 0.0 415120.0 356100.0 271730.0 215850.0 329820.0 322750.0 280700.0 415180.0 396170.0 347370.0 True False 392092.46607879654 338992.4214830027 289246.1505833725 236364.31910233092 355774.9575809034 320735.59753196593 309075.8953680023 413739.83748374006 324235.51463298424 344292.57204977056 1.1388351010434117 0.9846056784344401 0.8401173131947772 0.6865216919874831 1.0333506629631062 0.931578615310936 0.8977129350421263 1.2017100311531852 0.9417441471438806 1.0 18.39327553021377 -7.201896566613953 24.999943310152915 1.0537970972459498 0.9236284063347532 0.14870806248870183 0.12779981419102024 438.51781972788757 184118.20309233456 0.062126596533836176 0.03586878821934699 6.282079576266656e-08 7.201896566613953 -0.13016869091119665 EVYELLDS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 15 EVYELLDSPGK 11 0 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK;EVYELLDS(1)PGK 292.57 1.8380999999999998e-28 76469190000.0 36988590.0 32282950.0 28015040.0 27433900.0 28328110.0 31910360.0 29574440.0 32991410.0 35330660.0 31320050.0 True False 34936759.17777387 30732028.62430412 29820934.304048877 30041209.607697215 30557371.09210227 31711195.606692955 32564113.01391969 32876970.498962946 28915502.757460207 31042578.72363015 1.1254464227606003 0.9899959954328912 0.9606461682691543 0.9677420769437987 0.9843696093727378 1.0215387029864835 1.0490144296269859 1.0590927638990386 0.9314787606691072 1.0 24.887745072163916 -6.292897013949668 23.4668859391765 1.018217577562865 1.0001658290204205 0.0 0.053987995329940384 1699.603477280848 1267867.4006789112 0.019442690562513014 0.017150310000641926 5.094516651190915e-07 6.292897013949668 -0.018051748542444512 EVYELLDS(ph)PGKVLLQSK ddPTM_KYSE-520_SHP099_60min_R1 7 EVYELLDSPGKVLLQSK 17 1 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 EVYELLDS(1)PGKVLLQSK;EVY(0.001)ELLDS(0.999)PGKVLLQSK;EVYELLDS(1)PGKVLLQSK;EVYELLDS(1)PGKVLLQSK;EVYELLDS(1)PGKVLLQSK;EVYELLDS(1)PGKVLLQSK;EVYELLDS(1)PGKVLLQSK 242.11 1.6298e-23 5299592000.0 4039390.0 4794120.0 4029350.0 2566789.0 2865722.0 3715400.0 2484422.0 3069807.0 5076510.0 3238040.0 True False 3815316.984375666 4563803.279079171 4289088.348187946 2810735.8548267484 3091238.017672249 3692210.8104423448 2735571.621382123 3059158.5560153425 4154743.75240299 3209353.4847569996 1.188811703820325 1.422031976457316 1.3364337610547439 0.87579503727978 0.9631964918648735 1.1504531451517268 0.8523746712148943 0.9532008769195989 1.2945734311088428 1.0 21.61385126907799 -5.247042241533569 24.34427409268053 1.0078335919111754 1.326386489054626 0.5201027708924996 0.13318263722085438 431.38513539086887 729431.6894652991 0.03587450210046305 0.06174150531426158 5.661842166075833e-06 5.247042241533569 0.3185528971434506 EVYHEK ddPTM_KYSE-520_SHP099_60min_R1 1 EVYHEK 6 0 E7ETU9;O00469;O00469-2 E7ETU9 PLOD2 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 0 114.54 0.014648 435930000.0 1902000.0 1856900.0 1173000.0 1090400.0 1843900.0 1812400.0 1349600.0 1613200.0 1582000.0 1619900.0 False True 1796492.268457001 1767691.7367362762 1248613.4568663577 1194031.288159287 1989004.4396441323 1801088.1393243545 1486030.7388267042 1607604.185723711 1294748.6789746364 1605548.946263129 1.1189271262257607 1.100989004944714 0.7776863232805648 0.7436903689161032 1.2388313942552083 1.1217896181342448 0.9255592875479755 1.001280085210336 0.8064211819814826 1.0 20.614635216608168 -7.675644540652482 24.990944499438463 0.9031946146008152 0.9998278017691673 0.06362229916642814 0.15350022972388383 68.98058322771787 20078.59942381113 0.1107024669233575 0.04184155180417317 2.110354716670519e-08 7.675644540652482 0.09663318716835212 EVYQQQQYGS(ph)GGR ddPTM_KYSE-520_SHP099_60min_R1 1 EVYQQQQYGSGGR 13 0 Q99729-3;Q99729-4;D6R9P3;D6RD18;D6RBZ0;Q99729-2;Q99729 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 EVYQQQQYGS(1)GGR 90.367 0.004691600000000001 0.0 80505.0 81183.0 87390.0 80952.0 72593.0 63948.0 68211.0 75172.0 92382.0 64169.0 True False 76039.22716726128 77282.84682183265 93023.29922894381 88645.65374089367 78305.65610233023 63548.87681169385 75106.43355520758 74911.24587727665 75607.7575607048 63600.51258272659 1.1955756971039406 1.215129307665707 1.4626187030795759 1.393788353916021 1.231211084981058 0.9991881233509624 1.180909249080579 1.17784028516811 1.1887916384692676 1.0 15.956750772379484 -6.005702537821445 15.304724743994774 1.123849808504019 1.3190102743685932 0.504841684084141 0.09670056740750793 1.557306928314824 4180.827053175096 0.03239262360696305 0.03514821206744416 9.869552513906055e-07 6.005702537821445 0.19516046586457425 EWDFDLK ddPTM_KYSE-520_SHP099_60min_R1 2 EWDFDLK 7 0 H0Y9X1;Q96EY4 H0Y9X1 TMA16 Translation machinery-associated protein 16 0 ; 121.52 0.018588 222950000.0 518330.0 581820.0 417850.0 333220.0 528030.0 548470.0 404300.0 444110.0 468220.0 513120.0 False True 489577.20163476217 553868.4938703753 444785.2795836384 364889.1286137543 569582.9569202727 545046.7952853836 445170.5895877563 442569.48606605374 383203.05086567916 508574.1560013193 0.962646638366524 1.0890614226746878 0.8745731066650674 0.7174747759160764 1.119960482063495 1.0717154791561403 0.8753307346325351 0.8702162326646139 0.7534851040773002 1.0 18.956098625501273 -6.9659460462700595 24.538134355876107 0.8616650307000677 0.9689338985180322 0.12918060834525247 0.122837887741003 310.80623200283867 223955.72020405292 0.05417558008494988 0.03652492411052559 1.0815683094863929e-07 6.9659460462700595 0.10726886781796452 EWDRDK ddPTM_KYSE-520_SHP099_60min_R1 4 EWDRDK 6 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 0 ;;; 124.89 0.0085074 3638820000.0 4159610.0 4553480.0 2962040.0 2331840.0 3822560.0 4129230.0 2941600.0 3347800.0 3995720.0 3289740.0 False True 3928868.1413230416 4334723.98588718 3152977.837831567 2553457.3725067405 4123373.7246087515 4103457.9439099017 3238965.6352494326 3336187.2631823923 3270197.971904255 3260595.4629789945 1.2049541827349197 1.3294271046819233 0.9669944872434116 0.7831260889303368 1.264607575955311 1.2584995564463057 0.9933662952135129 1.023183434149275 1.00294501695604 1.0 21.63670402857762 -4.759320822174582 24.99999773911389 1.0428910774197973 1.2671906833210973 0.31667473128261947 0.13524297108421537 69.91118948876984 824930.5317457188 0.037643169426969075 0.09005228488612281 1.74052064033857e-05 4.759320822174582 0.22429960590130005 EWEKMKS(ph)LEK ddPTM_KYSE-520_SHP099_60min_R1 2 EWEKMKSLEK 10 2 Q7RTT5 Q7RTT5 SSX7 Protein SSX7 1 EWEKMKS(1)LEK;EWEKMKS(1)LEK 57.492 0.045651 1902570000.0 184820.0 3534810.0 1408070.0 1425270.0 4287200.0 921140.0 1482010.0 1852400.0 3090640.0 540360.0 True False 174567.66617046442 3364992.4217420206 1498836.4451916565 1560727.2322769486 4624578.249168791 915390.8235804668 1631826.033823773 1845974.4567534088 2529457.684694165 535572.8307937186 0.32594570921709237 6.28297820252589 2.7985669903575614 2.9141269731027095 8.634826083905654 1.709180845159487 3.0468797892630364 3.4467290919475433 4.722901423034306 1.0 19.030723250122627 EWFLQAAK ddPTM_KYSE-520_SHP099_60min_R1 2 EWFLQAAK 8 0 P06744-2;P06744;A0A2U3TZU2;A0A0J9YXP8;A0A2R8Y6C7;K7ERC6;A0A0J9YYH3;A0A0J9YX90;K7EQ48 P06744-2 GPI Glucose-6-phosphate isomerase 0 ; 133.55 0.0057344 2372700000.0 3402100.0 3480800.0 2325700.0 2117890.0 3711300.0 3546900.0 2816100.0 2498200.0 2395700.0 2847500.0 False True 3213378.731081789 3313577.143212682 2475618.3432515673 2319173.628833154 4003358.1955915582 3524762.4814442443 3100778.870487458 2489534.327284264 1960701.2706823885 2822273.3653214746 1.1385781301577655 1.1740808611696072 0.8771717062105282 0.8217395442021562 1.4184870412563846 1.2489089557214992 1.0986812647520627 0.8821024773412374 0.6947240812227459 1.0 21.428426303429823 -7.298379839340646 4.361211891333259 0.832929660407471 1.111399594273419 0.3048734570440067 0.1744345343009624 0.27893297088970354 12.38279030777486 0.10683927418051868 0.05057621445817059 5.0306043342976066e-08 7.298379839340646 0.278469933865948 EWLDKIEK ddPTM_KYSE-520_SHP099_60min_R1 2 EWLDKIEK 8 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ; 120.99 0.0010276 1020380000.0 1716420.0 1441590.0 955650.0 859370.0 1664240.0 1516550.0 1089120.0 1206520.0 1247580.0 1248170.0 False True 1621206.7610015601 1372333.8525292953 1017252.728094063 941044.2664209871 1795206.2197697002 1507084.6489143416 1199218.8783868826 1202334.8637238848 1021050.9209324754 1237112.184861565 1.3104767545256828 1.1093042889096285 0.822280097587023 0.7606781971242904 1.4511264554156718 1.2182279564912595 0.9693695471288865 0.9718883044211776 0.8253503064855292 1.0 20.238544903272068 -6.938024184648391 8.770839830078645 0.9331671282731377 1.09817655298466 0.15069885484861734 0.1979405982079603 0.6781769260907162 87.98286268363069 0.09087229158763924 0.06116088656169002 1.153389027014735e-07 6.938024184648391 0.16500942471152236 EWLLAHEGHR ddPTM_KYSE-520_SHP099_60min_R1 2 EWLLAHEGHR 10 0 B4DEE8;P16455 B4DEE8 MGMT Methylated-DNA--protein-cysteine methyltransferase 0 ; 110.84 0.00074782 1281480000.0 1048550.0 926350.0 734820.0 673040.0 1202620.0 920930.0 810190.0 750270.0 826690.0 716280.0 False True 990384.8412673966 881846.7555203016 782187.6729535701 737005.5192431451 1297259.3520282162 915182.1342683607 892091.9118924164 747667.4884843337 676583.9351590029 709934.316457408 1.3950372848708659 1.2421525978920718 1.1017747062245256 1.0381319822949582 1.8272948946905068 1.2891081795216563 1.256583730652689 1.0531502297497257 0.9530232860628227 1.0 19.437326026230586 -7.284760055959541 2.5696480705628524 0.9793531855577589 1.311278204513001 0.3362204567301521 0.19963753604879442 0.38060920948905547 4.870865354787524 0.13952801319841185 0.059873896907592955 5.1908675077300026e-08 7.284760055959541 0.33192501895524207 EWNGVVS(ph)ESDS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 5 EWNGVVSESDSPVK 14 0 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 2 EWNGVVS(0.79)ES(0.21)DS(1)PVK;EWNGVVS(0.817)ES(0.183)DS(1)PVK;EWNGVVS(0.966)ES(0.034)DS(0.999)PVK;EWNGVVS(0.863)ES(0.139)DS(0.998)PVK;EWNGVVS(0.505)ES(0.495)DS(1)PVK 160.64 1.1795e-05 1168620000.0 2861670.0 2639540.0 2652840.0 2535100.0 2706750.0 2702190.0 2786660.0 2977470.0 3180500.0 3074700.0 True False 2702927.4605022836 2512732.536369686 2823846.3110940764 2776035.1417943947 2919755.8256992027 2685324.6298835156 3068362.787980749 2967141.8515167246 2603001.373880426 3047460.5500804037 0.8869442002886535 0.8245332450007894 0.926622761702222 0.910933905845361 0.9580947079436904 0.88116797108749 1.0068589035220796 0.9736440563401025 0.8541542478086381 1.0 21.539176114346283 -4.865840335796315 5.906122195295505 0.9389244927664083 0.856351094750174 0.32489377725266655 0.0481887578223793 0.22194824358744702 10.732458056681711 0.012314783119204833 0.02641007006623663 1.3619452965717572e-05 4.865840335796315 -0.08257339801623431 EWNGVVS(ph)ESDS(ph)PVKRPGR ddPTM_KYSE-520_SHP099_60min_R1 8 EWNGVVSESDSPVKRPGR 18 2 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 2 EWNGVVS(0.993)ES(0.008)DS(0.999)PVKRPGR;EWNGVVS(0.787)ES(0.214)DS(0.999)PVKRPGR;EWNGVVS(1)ESDS(1)PVKRPGR;EWNGVVS(0.995)ES(0.005)DS(1)PVKRPGR;EWNGVVS(0.999)ES(0.007)DS(0.994)PVKRPGR;EWNGVVS(1)ESDS(1)PVKRPGR;EWNGVVS(1)ESDS(1)PVKRPGR;EWNGVVS(1)ES(0.001)DS(1)PVKRPGR 197.15 6.0867e-13 16339240000.0 8244190.0 8005860.0 7666550.0 7498850.0 7249440.0 7577990.0 7457020.0 7218740.0 8962430.0 7627920.0 True False 7786868.346314682 7621246.46855914 8160748.079913715 8211538.449388529 7819929.684328739 7530692.95349733 8210848.355101877 7193699.875806579 7335078.636474496 7560342.563231958 1.0299623702481924 1.0080557071082168 1.0794151206324558 1.0861331190630854 1.0343353649554485 0.9960782716541413 1.0860418408860875 0.9515044874807044 0.9702045344012606 1.0 22.850020174548195 -7.272169386550778 24.92773098022955 0.9706408787386048 1.0447724222525316 0.5218140733711705 0.0314481294430466 581.1636121219283 1350139.6750332825 0.01752071971909393 0.008558486427294941 5.343559055459734e-08 7.272169386550778 0.07413154351392681 EWNGVVSESDS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 4 EWNGVVSESDSPVK 14 0 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 EWNGVVSESDS(1)PVK;EWNGVVSES(0.001)DS(0.999)PVK;EWNGVVSES(0.019)DS(0.981)PVK;EWNGVVSES(0.002)DS(0.998)PVK 186.94 1.1182e-10 8242860000.0 9550100.0 8295600.0 7086100.0 7318100.0 7427100.0 8688700.0 8277900.0 8361300.0 8661000.0 8761500.0 True False 9020336.91534763 7897066.9240505425 7542881.344160867 8013610.023733 8011570.515581616 8634470.600390388 9114710.916518645 8332296.601842084 7088380.726042559 8683879.926343855 1.038745007054172 0.9093938413512148 0.8686072824750147 0.9228144667710697 0.9225796053763149 0.9943102246492865 1.049612730004223 0.9595131061825037 0.8162688551852141 1.0 23.049908346996958 -6.236339333491617 22.962485115783632 0.966765040959657 0.9270686664478938 0.04601296722786019 0.06904253864135136 865.1756258568721 791493.6019620268 0.023729906010945233 0.02371575826694412 5.803108178210955e-07 6.236339333491617 -0.03969637451176322 EWNGVVSESDS(ph)PVKRPGR ddPTM_KYSE-520_SHP099_60min_R1 4 EWNGVVSESDSPVKRPGR 18 2 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 EWNGVVS(0.007)ES(0.252)DS(0.741)PVKRPGR;EWNGVVSES(0.005)DS(0.995)PVKRPGR;EWNGVVS(0.007)ES(0.119)DS(0.874)PVKRPGR;EWNGVVSESDS(1)PVKRPGR 237.22 9.897100000000001e-24 62393800000.0 21896100.0 20401900.0 19538000.0 18151400.0 18244000.0 18619400.0 18491600.0 17321300.0 21741800.0 18025700.0 True False 20681479.68420682 19421762.100123785 20797450.741905276 19876503.59858261 19679699.005839545 18503189.41808425 20360911.38862468 17261216.453121822 17794037.186176218 17866006.3217824 1.1575882887151883 1.0870791015250338 1.1640794460342732 1.112531991794327 1.1015164022328747 1.0356645511495757 1.1396453702023193 0.9661485696485391 0.9959717278551259 1.0 24.090713841753903 -6.98724826861596 0.8194774955204781 0.9790508358497545 1.1285031666152383 0.6287240632511888 0.041527395224500434 0.4043884224784432 0.5085495549066623 0.034947972874189506 0.017855493307825668 1.0297972586398527e-07 6.98724826861596 0.1494523307654838 EWQHEEFYR ddPTM_KYSE-520_SHP099_60min_R1 4 EWQHEEFYR 9 0 I3L0K7;Q12931-2;Q12931;I3L239 I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial 0 ;;; 228.64 2.4585e-09 2487560000.0 1825310.0 1800040.0 1158450.0 1187320.0 2044840.0 1858970.0 1516350.0 1393050.0 1504650.0 1450410.0 False True 1724056.4156347278 1713563.376484875 1233125.5405855356 1300162.5358192266 2205757.274451929 1847367.4786800905 1669637.4561498729 1388217.8346903159 1231443.4891398153 1437560.4958019033 1.199293122389963 1.1919939240741386 0.8577903637353854 0.9044228327197924 1.5343752703927138 1.2850711215805828 1.1614380480165545 0.9656761150186844 0.8566202902319521 1.0 20.45519123853386 -7.30923696363771 4.4335063631075915 0.9258204143747745 1.1611290635366034 0.24088108964641664 0.18046837954599715 0.35536034883124007 15.467479076342691 0.11406719026773977 0.053451527071811174 4.906400956696454e-08 7.30923696363771 0.23530864916182892 EWSGLLEELAR ddPTM_KYSE-520_SHP099_60min_R1 4 EWSGLLEELAR 11 0 Q01813-2;Q01813;Q5VSR5;V9GYV7 Q01813-2 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 ;;; 218.94 6.3969e-09 183967000.0 282137.0 312966.0 219435.0 202279.0 328053.0 312524.0 240982.0 247029.0 242888.0 256832.0 False True 266486.2981838342 297930.64358845685 233580.13120841378 221503.53534260092 353868.90473375854 310573.4217911081 265342.8123176768 246172.11405600197 198785.66190821197 254556.6682922726 1.0468643385835974 1.1703902537190023 0.9175958059767881 0.8701541264999537 1.3901380274488009 1.2200561229632338 1.0423722705744245 0.9670621308311445 0.7809092696011153 1.0 17.95762733295226 -7.30985414986307 2.9379073507934303 0.8900481120624907 1.100189391588544 0.24218566751245862 0.14823144152517656 0.4100152540114255 6.96404892368245 0.10130939205716269 0.04396297784310046 4.8994333056342116e-08 7.30985414986307 0.21014127952605322 EWSLES(ph)SPAQNWTPPQPR ddPTM_KYSE-520_SHP099_60min_R1 2 EWSLESSPAQNWTPPQPR 18 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;F8W1U7;E5RHT6;E5RHC5;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 EWS(0.002)LES(0.489)S(0.489)PAQNWT(0.02)PPQPR;EWS(0.005)LES(0.478)S(0.478)PAQNWT(0.04)PPQPR 256.89 1.0539999999999999e-29 494830000.0 368400.0 431810.0 318110.0 275800.0 266370.0 327860.0 286300.0 370710.0 377320.0 346600.0 True False 347964.117612807 411065.1994399761 338615.8795939962 302011.9490777066 287331.8035620193 325813.704126508 315241.9980187353 369424.0935343645 308808.1994631542 343529.39365071943 1.0129092998854023 1.1965939655746696 0.985696961751928 0.8791444186717096 0.8364111161159079 0.9484303531178362 0.9176565494691116 1.0753784111701756 0.8989280252889577 1.0 18.390074021107157 -4.947854338352671 7.163679150999705 0.9349761378633851 1.1033219166178847 0.4428155430002201 0.0744700850803909 0.1866113404627674 20.692567114475125 0.019661319298347805 0.04121897963800018 1.1275755797361026e-05 4.947854338352671 0.16834577875449963 EWSLESSPAQNWT(ph)PPQPR ddPTM_KYSE-520_SHP099_60min_R1 5 EWSLESSPAQNWTPPQPR 18 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;F8W1U7;E5RHT6;E5RHC5;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 EWSLESSPAQNWT(1)PPQPR;EWSLESSPAQNWT(1)PPQPR;EWS(0.001)LES(0.01)S(0.01)PAQNWT(0.978)PPQPR;EWSLESSPAQNWT(1)PPQPR;EWSLES(0.001)S(0.471)PAQNWT(0.527)PPQPR 242.1 5.640999999999999e-23 2332857000.0 1133840.0 1297080.0 1076930.0 889430.0 924980.0 1205040.0 929700.0 1120900.0 1401010.0 1291310.0 True False 1070943.6349459977 1234766.329843227 1146350.6309489226 973961.1597831207 997770.6635837245 1197518.898373108 1023683.1489976187 1117011.8595200279 1146621.900588024 1279869.9980239787 0.8367596995003029 0.9647591800336064 0.8956773990474034 0.7609844447380142 0.7795875089846672 0.9356566684288135 0.7998336944987438 0.872754155691288 0.8958893499795452 1.0 20.287565846165787 -8.180628046771425 1.9066542307487389 0.9997570583360119 0.8553886805320033 0.3330216619484858 0.06189538762089411 0.8541877097413842 5.772998543251635 0.062474258612801696 0.01748493293075137 6.597386891623123e-09 8.180628046771425 -0.14436837780400857 EWT(ph)PAGK ddPTM_KYSE-520_SHP099_60min_R1 2 EWTPAGK 7 0 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 EWT(1)PAGK;EWT(1)PAGK 98.044 0.026715 1004450000.0 1938800.0 1720260.0 1500130.0 1366970.0 1385390.0 1492740.0 1290310.0 1484080.0 1774740.0 1494910.0 True False 1831250.899098022 1637616.1274370954 1596830.7800928645 1496886.4178054829 1494412.31120917 1483423.255956213 1420747.1270120656 1478932.072866877 1452491.9535546438 1481666.2604223816 1.2359402032789648 1.1052530324678222 1.0777263562967634 1.0102723250097916 1.008602511326103 1.0011858240824965 0.9588847130844772 0.9981546535623177 0.9803097987400881 1.0 20.49878909209899 -2.914565352667903 0.5754735215911938 0.9826636010758971 2.2901693265215126 0.9646659114813338 0.014667664650224182 2.4278803069938837 0.1837784444769548 0.006822061084288413 2.982332897604417 0.0012174037840434874 2.914565352667903 1.3075057254456155 EWTDGLFTHVLR ddPTM_KYSE-520_SHP099_60min_R1 3 EWTDGLFTHVLR 12 0 Q14204;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ;; 160.16 6.469299999999999e-06 588131000.0 770517.0 732188.0 557658.0 518020.0 1006481.0 842765.0 615334.0 597471.0 580776.0 591052.0 False True 727774.8860224407 697012.5894434054 593605.526964347 567252.465051608 1085685.3286064693 837504.9910271962 677537.9658011186 595398.5125517795 475321.71857153776 585815.7391114982 1.2423273009466265 1.1898154025369112 1.0132973345247833 0.9683120940245734 1.8532880838147487 1.4296389378295518 1.1565718033263066 1.0163579992828724 0.811384342954756 1.0 19.160087429062546 -7.246594898127521 2.748651757641503 0.914806589089387 1.277061679306554 0.2948628522856893 0.23548362808118273 0.40002106238147545 5.956655099558038 0.16003326175715502 0.07305247595608738 5.6676771300390965e-08 7.246594898127521 0.36225509021716695 EWYGWHFPELGK ddPTM_KYSE-520_SHP099_60min_R1 1 EWYGWHFPELGK 12 0 Q9Y2X3;H7BZ72 Q9Y2X3 NOP58 Nucleolar protein 58 0 81.625 0.022034 45525000.0 209640.0 190220.0 143250.0 118490.0 208100.0 185450.0 142580.0 138330.0 142510.0 128770.0 False True 198010.85129302082 181081.5456739592 152484.12420810398 129751.25397468254 224476.28607296696 184292.5377608153 156993.37784670375 137850.16551646483 116633.77638475056 127629.19798154388 1.5514541689876844 1.4188097123367092 1.1947432611004443 1.0166267282620198 1.7588160830206572 1.4439684701886581 1.2300741548920973 1.0800833014432871 0.9138486978631383 1.0 16.961598889467805 -7.208201508189519 2.245983201234627 0.9702390510921131 1.385778489745928 0.47560476066434854 0.18841803230390133 0.31535020175669737 3.040251392012622 0.13180347543285584 0.05865597925232727 6.191537274335076e-08 7.208201508189519 0.41553943865381493 EY(ph)AQVFR ddPTM_KYSE-520_SHP099_60min_R1 1 EYAQVFR 7 0 P35221;G3XAM7;P35221-2;P35221-3;P26232;P26232-5;P26232-2;P26232-3;P26232-4;P26232-6;A0A0A0MRI5;A0A0A0MTJ6;B9A010;E5RGU3;A0A087WZL6;E5RGD2;E5RJP7;E5RFK9;E5RFG3;E5RHJ5;E5RFM5 P35221 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 EY(1)AQVFR 102.72 0.013438999999999998 217770000.0 396320.0 366300.0 324790.0 384760.0 431760.0 353910.0 327490.0 388330.0 480530.0 395880.0 True False 374335.339555667 348702.3981724908 345726.48308237386 421327.47471768805 465737.0556216447 351701.1164137515 360595.88519439625 386982.9738669037 393277.86517552554 392372.8111899799 0.9540297616962571 0.8887017352577352 0.8811173282722163 1.0737937560961348 1.1869758615770734 0.896344258276 0.9190134354640648 0.9862634790959903 1.0023066174814734 1.0 18.581865550345714 -5.2463168139043574 24.764287947568935 1.0076120541448879 0.9060248142040719 0.26219132491765984 0.07781287568986894 1112.290441384496 1821451.5885073582 0.023264740231537368 0.04009578052575932 5.6713073771661084e-06 5.2463168139043574 -0.10158723994081598 EY(ph)FTFPASK ddPTM_KYSE-520_SHP099_60min_R1 1 EYFTFPASK 9 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 EY(0.866)FT(0.134)FPASK 100.02 0.0057396999999999995 148430000.0 242250.0 240780.0 235410.0 201470.0 210530.0 195010.0 180440.0 207700.0 252290.0 198770.0 True False 228811.9095865974 229212.56738185155 250584.9052693175 220617.64822583596 227097.5132481582 193792.87025471317 198680.63612469632 206979.53717754467 206480.4957133444 197009.05244071974 1.1614284052020767 1.1634621076654428 1.271946147473192 1.1198350811428834 1.1527262855928517 0.9836749522615246 1.0084848064759844 1.0506092720781197 1.0480761830752656 1.0 17.58790239656152 -6.1324724456243835 3.686225125478752 1.0208964206105473 1.1808748965519886 0.7834451221362017 0.04094693756301784 0.11780491234021392 2.8677650076519767 0.014552270530448832 0.014642643054940712 7.371019402411963e-07 6.1324724456243835 0.15997847594144132 EYCLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 EYCLSPR 7 0 Q8NCD3;C9JWC4;Q8NCD3-3;Q8NCD3-2 Q8NCD3 HJURP Holliday junction recognition protein 1 EYCLS(1)PR 72.607 0.024901 281700000.0 379040.0 377710.0 363060.0 296230.0 337950.0 357700.0 338340.0 324100.0 390470.0 383670.0 True False 358013.89560249314 359564.24464573135 386463.42851653893 324383.6101352027 364544.7423275309 355467.4616179221 372542.70908019197 322975.7727455085 319570.49094767775 380270.9822907434 0.9414704573192146 0.9455474158972763 1.0162842986033076 0.853032772001491 0.9586446489593343 0.9347740905093377 0.9796769315292045 0.8493305768426245 0.8403756947811076 1.0 18.536668328465876 -7.26107486021012 24.999997896760892 0.8836398523036777 0.946022117968044 0.13289583567139884 0.05622439726915172 51.81126717010932 3553699.746753707 0.02715158685009368 0.014441816118621897 5.48182465466493e-08 7.26107486021012 0.06238226566436633 EYDKDGNLRPWWK ddPTM_KYSE-520_SHP099_60min_R1 1 EYDKDGNLRPWWK 13 2 B4DKB2;A0A3B3ISF9;P42892-3;P42892-2;P42892-4;P42892 B4DKB2 ECE1 Endothelin-converting enzyme 1 0 122.97 5.5655e-05 766880000.0 819700.0 1093600.0 782700.0 1010100.0 1495800.0 1400700.0 1205600.0 1404900.0 1487800.0 1141100.0 False True 774229.6069685618 1041061.8144729339 833154.0943642777 1106099.6003023612 1613510.9500622028 1391957.7117367182 1327473.813522135 1400026.7298061268 1217653.0243858825 1130990.7417623661 0.6845587486968449 0.9204865928881959 0.7366586335322387 0.9779917372080179 1.4266349762933952 1.230741915329652 1.173726507657878 1.2378763840493825 1.076625103480931 1.0 20.10915568886571 -5.536886905714706 6.555063285167419 1.2048434886937711 0.8034787078382608 0.7036226748062462 0.11950969477191302 0.07857611491155017 14.587933631321215 0.03408022595999173 0.04551862487298706 2.904778987199198e-06 5.536886905714706 -0.4013647808555103 EYDQALADLKK ddPTM_KYSE-520_SHP099_60min_R1 1 EYDQALADLKK 11 1 Q08752;H0Y8J0 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D 0 131.13 0.0012261 0.0 163360.0 152660.0 99394.0 88966.0 142340.0 135540.0 109680.0 126140.0 125780.0 120790.0 False True 154298.09514991374 145325.98445266837 105801.09627602296 97421.30189139683 153541.34819618525 134694.04458398971 120767.52477364622 125702.44978129717 102941.52265577095 119719.89457319787 1.2888258522110076 1.2138833313440207 0.8837386355309156 0.8137436324906928 1.2825048730919875 1.12507653856675 1.0087506776061168 1.0499712702673782 0.8598531014645318 1.0 16.86930338793114 -4.612519672971206 6.313626402087556 1.0130613863474707 1.2705281945203464 0.37457304868196595 0.1293060814087046 0.21427282808157955 11.995149119887918 0.035079391054551705 0.0953878032576858 2.4405085136988423e-05 4.612519672971206 0.2574668081728757 EYDQLY(ph)EEYTR ddPTM_KYSE-520_SHP099_60min_R1 2 EYDQLYEEYTR 11 0 A0A5F9ZHY3;E9PFP1;O00459 A0A5F9ZHY3 PIK3R2 Phosphatidylinositol 3-kinase regulatory subunit beta 1 EY(0.001)DQLY(0.999)EEYTR;EYDQLY(1)EEYTR 236.69 6.9412e-17 866950000.0 1554210.0 1389280.0 1403770.0 1401000.0 1312260.0 1385930.0 1376020.0 1568840.0 1846710.0 1442270.0 True False 1467994.8730591775 1322536.9034482054 1494259.2603114126 1534150.6187739898 1415527.39626195 1377279.8967853691 1515121.5302610556 1563398.0602100089 1511394.0157707038 1429492.6098690822 1.0269342163256245 0.9251792519370406 1.0453074398532651 1.073213396265471 0.9902306500147551 0.9634746533677464 1.059901618099177 1.0936734121019276 1.057294039392846 1.0 20.447071730928172 -6.8002921194367945 21.97860454998102 1.0605237529347613 1.0048614007405492 0.21500638722437315 0.04454671330120877 66.91131798503908 37849.23070173907 0.019276335517956957 0.012996846759947982 1.5838275044210807e-07 6.8002921194367945 -0.05566235219421212 EYDRLY(ph)EEYTR ddPTM_KYSE-520_SHP099_60min_R1 2 EYDRLYEEYTR 11 1 P27986-5;P27986-3;P27986-2;P27986;P27986-4;E5RJY0;H0YBC2;Q5T4P3;F6TDL0;Q92569-3;Q92569-2;Q92569 P27986-5 PIK3R1;PIK3R3 Phosphatidylinositol 3-kinase regulatory subunit alpha;Phosphatidylinositol 3-kinase regulatory subunit gamma 1 EY(0.054)DRLY(0.94)EEY(0.006)TR;EYDRLY(0.999)EEY(0.001)TR 75.229 0.015790000000000002 729170000.0 1037550.0 1088350.0 1106560.0 854140.0 1102460.0 1015190.0 841940.0 923140.0 1241160.0 1001050.0 True False 979995.0331953531 1036064.0323533451 1177890.6281585994 935317.2087934441 1189217.3298606605 1008853.8226443889 927051.511742556 919937.8428024962 1015796.6310974467 992181.475805115 0.9877175265745886 1.0442283570277515 1.1871725655861383 0.9426876348749327 1.19858852322924 1.0168037271868486 0.934356803013573 0.9271870774003355 1.0238012459093424 1.0 19.92024449655999 -6.52065962057805 24.45914783177705 0.9667416130013206 1.0735332288537844 0.27038107364055053 0.07802029508923258 84.14264499150846 927449.8176871001 0.0283083124920734 0.02231406118984056 3.015368401078574e-07 6.52065962057805 0.10679161585246388 EYDS(ph)GDT(ph)DEIIAMK ddPTM_KYSE-520_SHP099_60min_R1 4 EYDSGDTDEIIAMK 14 0 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 2 EYDS(1)GDT(1)DEIIAMK;EYDS(1)GDT(1)DEIIAMK;EYDS(1)GDT(1)DEIIAMK;EYDS(1)GDT(1)DEIIAMK 217.48 1.6187e-13 1101380000.0 3013340.0 2683040.0 2239170.0 2822040.0 2815420.0 2726290.0 2738120.0 2853400.0 2849030.0 2792170.0 True False 2846184.023255634 2554142.731074858 2383510.4809986735 3090245.8331227335 3036977.5364514804 2709274.21284407 3014915.8910759995 2843502.2213885696 2331717.970201714 2767433.5460753865 1.0284561402718873 0.9229282974823352 0.8612710807017677 1.1166468071130888 1.097398541243509 0.9789843794754188 1.0894266622414757 1.0274870829043246 0.8425560835989796 1.0 21.400117243549225 -3.8968966440266812 19.308296014130423 0.9980204610537988 4.008107643649104 0.01089429958888255 0.09057940048159119 2962.377965874486 570483.0565552054 0.022783151927776038 11115.279629764027 0.0001267953585058774 3.8968966440266812 3.0100871825953046 EYDS(ph)GDTDEIIAMK ddPTM_KYSE-520_SHP099_60min_R1 4 EYDSGDTDEIIAMK 14 0 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 EYDS(0.998)GDT(0.002)DEIIAMK;EYDS(0.999)GDT(0.001)DEIIAMK;EYDS(0.997)GDT(0.003)DEIIAMK;EYDS(0.996)GDT(0.004)DEIIAMK 251.68 6.234e-19 715783000.0 1123740.0 1129780.0 888504.0 984870.0 1107950.0 1132080.0 990540.0 977032.0 1170120.0 979814.0 True False 1061403.9020798483 1075503.672965646 945778.3894966631 1078471.748688038 1195139.361626834 1125014.2687962472 1090673.4499387993 973642.9040329825 957655.7043247806 971133.6102437578 1.0929535245036286 1.1074724029947753 0.9738911098538434 1.1105287030662423 1.230664193907211 1.1584546728990923 1.1230930928907263 1.0025838811083831 0.9861214710552606 1.0 19.88931027221869 -7.277421220628959 7.84956647161085 0.9953523062021868 1.114352115723414 0.44695514229336075 0.05996194855722021 0.2044838775448111 75.48154183642846 0.03586784243730129 0.017960025321489586 5.279329631326097e-08 7.277421220628959 0.11899980952122713 EYEGGRGESS(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 2 EYEGGRGESSKR 12 2 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 1 EYEGGRGES(0.425)S(0.575)KR;EYEGGRGES(0.396)S(0.604)KR 87.566 0.0027645 645470000.0 720560.0 808360.0 738780.0 611700.0 697800.0 650060.0 491220.0 604870.0 925400.0 548320.0 True False 680589.100399252 769525.1722269036 786402.9408897933 669835.7840856881 752712.8900611066 646002.7344124867 540877.3114452087 602771.8471477192 757370.6874356065 543462.3113865046 1.2523206966512612 1.415967871375768 1.447023877117602 1.23253401395356 1.3850323643248654 1.1886799155665027 0.9952434605176192 1.109132748524735 1.3936029630157234 1.0 19.0518204635788 -6.383496218601763 4.49567691924002 1.1288289541712797 1.3491678821319797 0.4374104146678225 0.11998305520480719 0.22792282787344878 7.350979514369404 0.04370704905988357 0.03814152378918507 4.13526914907144e-07 6.383496218601763 0.22033892796069998 EYEIHHGK ddPTM_KYSE-520_SHP099_60min_R1 4 EYEIHHGK 8 0 Q8IXB1-2;Q8IXB1 Q8IXB1-2 DNAJC10 DnaJ homolog subfamily C member 10 0 ;;; 159.2 0.000262 4253640000.0 8219700.0 7049300.0 4696030.0 4746810.0 7352400.0 7774500.0 5863750.0 6676000.0 5967070.0 5009710.0 False True 7763736.855434291 6710641.046784984 4998743.607713664 5197945.3952195365 7930992.050566482 7725976.46169566 6456515.074685147 6652842.514190113 4883600.505593667 4965327.8668954065 1.5635899710060037 1.3515000875422236 1.0067298155759352 1.0468483722646045 1.5972745935759063 1.5559851572352184 1.3003199884808638 1.3398596613419271 0.9835403897803752 1.0 22.24345755320611 -7.760762384218639 24.19125053564321 0.9917699677531566 1.3381660689225225 0.3554184427741378 0.1902269091619346 14.359817563090628 513386.2314551476 0.16276457381730441 0.05307186338329117 1.734752874455511e-08 7.760762384218639 0.3463961011693659 EYELFEFR ddPTM_KYSE-520_SHP099_60min_R1 3 EYELFEFR 8 0 B7Z7G7;A0A2R8YF01;A0A087WU65;A0A1B0GXI6;A0A2R8YE10;A0A2R8YD95;Q9NRW7-2;Q9NRW7 B7Z7G7 VPS45 Vacuolar protein sorting-associated protein 45 0 ;; 126.52 0.0064837 94345000.0 220068.0 211361.0 171371.0 130837.0 212499.0 207099.0 181419.0 180245.0 186589.0 200195.0 False True 207860.38934531843 201206.90030067088 182417.8488632946 143271.70914242158 229221.46234608075 205806.4183215264 199758.60299881548 179619.77216449942 152709.14112591554 198421.42804935313 1.0475702719648685 1.0140381625044292 0.9193455094876247 0.7220576454413269 1.1552253433488382 1.0372187134462938 1.0067390652441517 0.9052438233627812 0.7696202100104449 1.0 17.598208308988355 -4.6265682627340095 4.8199046061194615 0.9421528910874775 1.039659375175281 0.08799247436359725 0.11924325871796906 0.5433683686176161 20.26283351746646 0.032239158961760515 0.0919519289400778 2.362825979196387e-05 4.6265682627340095 0.09750648408780349 EYEQSES(ph)S(ph)LPELK ddPTM_KYSE-520_SHP099_60min_R1 1 EYEQSESSLPELK 13 0 G3XAL8;Q86YA3-3;Q86YA3-6;Q86YA3-5;Q86YA3-4;Q86YA3 G3XAL8 ZGRF1 Protein ZGRF1 2 EY(0.006)EQS(0.02)ES(0.988)S(0.987)LPELK 52.265 0.057981 0.0 191980.0 174690.0 182900.0 162550.0 176970.0 219210.0 176370.0 207950.0 226040.0 194270.0 True False 181330.48669735805 166297.63018496413 194690.02665034716 177998.7031275606 190896.53217843804 217841.82907817923 194199.20080532407 207228.6699858951 184996.83400469457 192548.91893977302 0.9417372358973152 0.863664315025212 1.0111198116424838 0.9244336665594911 0.991418353473842 1.131358359619342 1.008570714780628 1.0762390727870756 0.9607783571226352 1.0 17.554865497625688 -5.976950842163886 5.70468833040492 1.0409718342647358 0.9372715302835071 0.4264190601935406 0.05448007012959417 0.15786547328068315 15.949427841406388 0.016800550336430502 0.018668401594587224 1.0545062493048323e-06 5.976950842163886 -0.10370030398122876 EYFSWEGAFQHVGK ddPTM_KYSE-520_SHP099_60min_R1 6 EYFSWEGAFQHVGK 14 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ;;;;; 278.46 2.9027e-25 17255903000.0 7753225.0 7087004.0 4536487.0 5303915.0 7433373.0 6505401.0 5566065.0 4660649.0 4842313.0 4682938.0 False True 7323138.153579149 6746533.69003013 4828916.210655833 5807997.486919808 8018337.1649931315 6464798.379303017 6128737.169759523 4644482.296422653 3963071.023977059 4641450.812590636 1.5777692039122835 1.453539843992128 1.0403893966853355 1.2513323358215362 1.7275497444122818 1.3928400063545379 1.320435660577162 1.0006531328143764 0.8538431589593991 1.0 22.1461443990242 -7.25572751068978 2.8979319738475473 0.9237147565399201 1.3981851547800048 0.5805220387720215 0.17456283339094344 0.21487313461064678 3.6050222622132444 0.11554244396465554 0.05304642369131961 5.5497381086330316e-08 7.25572751068978 0.47447039824008475 EYGDYFVVEYRDQK ddPTM_KYSE-520_SHP099_60min_R1 1 EYGDYFVVEYRDQK 14 1 Q685J3-2;Q685J3 Q685J3-2 MUC17 Mucin-17 0 55.31399999999999 0.059616999999999996 1203400000.0 2302100.0 2190500.0 1414000.0 1275700.0 2238600.0 2503700.0 1693300.0 2066500.0 1632800.0 1888300.0 False True 2174397.923877422 2085265.0919924658 1505148.7024799928 1396942.1444468107 2414765.0841083317 2488073.4795996416 1864475.2890154528 2059331.7938247235 1336324.6795384225 1871571.1310751678 1.1618035177900443 1.1141789149069299 0.8042166698816972 0.7464007759322001 1.2902342016363084 1.3294036429009832 0.9962086174861874 1.1003224828765616 0.7140122314083459 1.0 20.835818449781804 -7.7416688374178575 24.98855179934831 0.8570060099172077 1.063631670985794 0.1690573448359869 0.18678715829210532 407.27918933122237 514775.4655047062 0.136814460641238 0.051557341725316376 1.81272182056328e-08 7.7416688374178575 0.20662566106858637 EYGHTFR ddPTM_KYSE-520_SHP099_60min_R1 1 EYGHTFR 7 0 Q96EY7-2;Q96EY7 Q96EY7-2 PTCD3 Pentatricopeptide repeat domain-containing protein 3, mitochondrial 0 107.9 0.0057688999999999995 144100000.0 162710.0 142610.0 110590.0 91615.0 137180.0 129540.0 108890.0 109210.0 116810.0 109080.0 False True 153684.1519456565 135758.80153802593 117718.80835025625 100322.06205494584 147975.28555256897 128731.49280957668 119897.66386398896 108831.17599980552 95600.24854047234 108113.63606295596 1.4215057188175988 1.2557047055467807 1.0888433007812917 0.9279316255400661 1.3687014047552803 1.1907054234547683 1.1089966837686507 1.0066369050471278 0.8842570837669643 1.0 16.72218897197489 -1.0000000000000002 0.28296905472452627 1.0049725390526818 3.7862107300670633 0.4273739336449597 0.13034436927547774 60.58864481136076 0.8561719664407411 0.15705868458772554 83.62585484079212 0.09999999999999995 1.0000000000000002 2.7812381910143813 EYGS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 10 EYGSPLK 7 0 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;P21127-5;P21127-4;P21127-12;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 EY(0.003)GS(0.997)PLK;EY(0.001)GS(0.999)PLK;EYGS(1)PLK;EYGS(1)PLK;EYGS(1)PLK;EYGS(1)PLK;EYGS(1)PLK;EYGS(1)PLK;EYGS(1)PLK;EYGS(1)PLK 125.48 0.0022754000000000003 60217700000.0 34344160.0 29992730.0 27021900.0 26417660.0 29036270.0 28607140.0 28652970.0 29197600.0 32437530.0 27995230.0 True False 32439020.98141442 28551834.23079442 28763774.910568684 28928386.463640932 31321259.25522307 28428592.22798019 31549491.83363912 29096320.340371042 26547692.23558797 27747214.042159338 1.1690910998173119 1.028998233387054 1.036636502203961 1.0425690456593917 1.1288073536908354 1.0245566342186845 1.1370327769015862 1.0486213245107008 0.9567696488465903 1.0 24.725839589211855 -7.621576503407995 5.113179449826413 0.9803549801040089 1.0766593556280872 0.4070725429069707 0.04866971175489695 0.2075673362553842 8.5521911386231 0.03396911872120388 0.0120599341085161 2.39014086154463e-08 7.621576503407995 0.09630437552407833 EYGS(ph)PLKAYT(ph)PVVVTLWYR ddPTM_KYSE-520_SHP099_60min_R1 2 EYGSPLKAYTPVVVTLWYR 19 1 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;P21127-5;P21127-4;P21127-12 P21127 CDK11B Cyclin-dependent kinase 11B 2 EYGS(0.999)PLKAY(0.016)T(0.984)PVVVTLWYR;EY(0.011)GS(0.989)PLKAY(0.008)T(0.971)PVVVT(0.021)LWY(0.001)R 110.78 4.1311000000000005e-05 697550000.0 921820.0 1314910.0 1207830.0 1067430.0 914950.0 958160.0 660900.0 726090.0 1429920.0 616270.0 True False 870684.8069973885 1251739.7498798526 1285688.6543963298 1168878.2262654682 986951.3596466194 952179.7680285937 727710.2217624235 723571.3632606805 1170282.5733498186 610810.3272508049 1.4254585558765063 2.0493100624441074 2.104890171361515 1.9136517084222693 1.6158066024993176 1.5588796154024736 1.191384934563522 1.1846089219175477 1.9159508625486759 1.0 19.220364929085605 -6.137836786161871 1.8560044161378677 1.3496554646429102 1.8997403287423125 0.41160755953788775 0.2856496651575425 0.3430250643463877 2.340629859465471 0.1117331492785871 0.11154000653119485 7.28053365595596e-07 6.137836786161871 0.5500848640994023 EYGS(ph)TSS(ph)IDKQGTSGESFFDLLK ddPTM_KYSE-520_SHP099_60min_R1 2 EYGSTSSIDKQGTSGESFFDLLK 23 1 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 2 EY(0.002)GS(0.844)T(0.125)S(0.039)S(0.99)IDKQGTSGESFFDLLK;EYGS(0.997)T(0.019)S(0.118)S(0.866)IDKQGTSGESFFDLLK 162.45 1.6632e-10 380013000.0 842460.0 933600.0 895870.0 865490.0 885850.0 822290.0 751880.0 935300.0 1189110.0 922800.0 True False 795727.0643976256 888748.4546378312 953619.2136426809 947745.9093809426 955561.3552029686 817157.7830970122 827887.3680416569 932055.6626006621 973197.599023724 914624.7099275355 0.8700038996985661 0.9717083356606947 1.0426344305941995 1.0362128850160097 1.0447578606078514 0.8934350605526004 0.9051661944572319 1.0190580382138459 1.0640403527921622 1.0 19.80282037062997 -4.298120185785461 3.6745596828679985 0.9974120354328269 0.8606110954063233 0.33509341314377483 0.054885129317457995 0.3139752228942686 7.781300468293784 0.015411289932101419 0.10977985802152342 5.033612903156879e-05 4.298120185785461 -0.13680094002650356 EYGS(ph)TSSIDK ddPTM_KYSE-520_SHP099_60min_R1 1 EYGSTSSIDK 10 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 EYGS(0.684)T(0.061)S(0.252)S(0.003)IDK 142.97 9.7499e-05 0.0 206140.0 187620.0 183180.0 165390.0 168480.0 171830.0 168940.0 170580.0 220510.0 189150.0 True False 194705.0032700979 178606.45357663854 194988.07589836261 181108.61587368342 181738.41747993047 170757.54523289783 186018.10389551212 169988.29779367137 180470.94260473922 187474.278156473 1.038569158311893 0.9526984465973883 1.0400790861326497 0.9660451431237059 0.969404545877194 0.9108318587063833 0.9922326717281956 0.9067286428050295 0.9626437524091249 1.0 17.516333142996363 -5.456466018619493 6.148092738492086 0.9530452101263075 1.0048702519177428 0.2987642523672638 0.03623792835788776 0.27419459073746383 19.746590325299497 0.009642019087542935 0.014256480452372232 3.49569860629349e-06 5.456466018619493 0.05182504179143532 EYGS(ph)TSSIDKQGTSGESFFDLLK ddPTM_KYSE-520_SHP099_60min_R1 1 EYGSTSSIDKQGTSGESFFDLLK 23 1 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 EY(0.158)GS(0.209)T(0.209)S(0.209)S(0.209)IDKQGT(0.001)S(0.002)GES(0.003)FFDLLK 74.657 0.0042295 12830000.0 72786.0 79595.0 70835.0 56617.0 68545.0 69403.0 61245.0 66218.0 104560.0 64550.0 True False 68748.41548470625 75771.13672546919 75401.13744000733 61997.862657478254 73939.1015322996 68969.83013326427 67436.24229359908 65988.30521339741 85574.53974310234 63978.13721914011 1.0745610684041458 1.184328585027965 1.1785453706121634 0.9690476364624535 1.1556932531349084 1.0780218545129947 1.0540513560533054 1.0314196080353513 1.337559101634821 1.0 15.96529136725418 -11.464153258745036 2.0403161821559688 0.0001280684206204986 1.1129643930320063 0.11459192443719801 0.09756557753065523 3186716.891060875 180600.08967352856 14845029.342283592 0.02365670649504645 3.4343673067794383e-12 11.464153258745036 1.112836324611386 EYGST(ph)SS(ph)IDKQGTSGESFFDLLK ddPTM_KYSE-520_SHP099_60min_R1 1 EYGSTSSIDKQGTSGESFFDLLK 23 1 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 2 EY(0.127)GS(0.368)T(0.478)S(0.193)S(0.834)IDKQGTSGESFFDLLK 112.99 0.00019426 85396000.0 165370.0 172280.0 185660.0 176550.0 175520.0 156220.0 163370.0 187490.0 217060.0 184000.0 True False 156196.59644307793 164003.41020244788 197627.94066650333 193329.25891830685 189332.42542780988 155244.97303313343 179885.03393755053 186839.64095049517 177647.37563731655 182369.90314983396 0.8564823128449424 0.8992898903263863 1.083665326641828 1.0600941031342697 1.0381780225668902 0.8512642182278571 0.9863745652689091 1.0245091855808517 0.9741046771920616 1.0 17.476508132891365 -4.589253223207376 7.440826213503518 1.0003867945296872 0.866893518444236 0.4163836283998529 0.05980231243836677 0.20431489207115447 19.0393608893271 0.016507144114755665 0.044351583656772255 2.5748194244719005e-05 4.589253223207376 -0.13349327608545114 EYHPDKNPNAGDK ddPTM_KYSE-520_SHP099_60min_R1 7 EYHPDKNPNAGDK 13 1 O60884;I3L320 O60884 DNAJA2 DnaJ homolog subfamily A member 2 0 ;;;;;; 173.06 5.1021e-07 20405850000.0 11975650.0 10665020.0 7209520.0 7440850.0 11922280.0 11832480.0 9417210.0 12146240.0 8930960.0 9380310.0 False True 11311336.821633587 10152656.430678615 7674257.194839863 8148026.146826866 12860495.607506065 11758629.103284407 10369193.489912728 12104107.528393734 7309322.795180356 9297207.75117076 1.2166380621331383 1.0920113546349581 0.8254367763131328 0.876394974157786 1.3832643038321473 1.2647484511469254 1.115301902187458 1.301907825698475 0.7861847331807684 1.0 23.148366063136077 -4.267284717682207 7.031709309542337 1.0843204725068194 1.2183367216358278 0.044416719436908725 0.19403765683509389 0.425242676096762 164.4461034059503 0.05059416639838222 0.27295701279794377 5.4039992778955265e-05 4.267284717682207 0.13401624912900845 EYHPDKNPNAGDKFK ddPTM_KYSE-520_SHP099_60min_R1 2 EYHPDKNPNAGDKFK 15 2 O60884 O60884 DNAJA2 DnaJ homolog subfamily A member 2 0 ; 216.99 4.8294e-14 13432500000.0 11126000.0 10835700.0 7862400.0 6383300.0 9139900.0 9366900.0 7547300.0 8256500.0 9147200.0 6072200.0 False True 10508818.600868868 10315136.7072827 8369222.884284792 6989966.91279088 9859158.131082702 9308437.702624856 8310254.738549776 8227860.1285815835 7486299.062147159 6018405.03210012 1.7461135541424038 1.713931955769889 1.3906047930716214 1.1614317872440922 1.6381679329485663 1.546661890148108 1.3808068241046776 1.3671163846063838 1.2439008378827603 1.0 22.520949771066736 -1.62436498262739 0.04414676222641227 4.824983353745938e-12 3.7398697433694648 0.5860365117129929 0.14893550180122642 470.6210812055865 1.7603786801991332 40.89018526478044 131.90046609147367 0.023748436207135883 1.62436498262739 3.7398697433646397 EYIPGQPPLSQS(ph)SDS(ph)SPTR ddPTM_KYSE-520_SHP099_60min_R1 3 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 2 EYIPGQPPLS(0.083)QS(0.816)S(0.102)DS(0.705)S(0.294)PTR;EYIPGQPPLS(0.003)QS(0.991)S(0.006)DS(0.573)S(0.425)PT(0.002)R;EYIPGQPPLS(0.001)QS(0.995)S(0.004)DS(0.615)S(0.382)PT(0.003)R 218.11 1.1669000000000001e-18 1410230000.0 1598330.0 1432710.0 1385250.0 1253040.0 1401390.0 1350020.0 1308490.0 1392280.0 1757220.0 1398860.0 True False 1509667.448708139 1363880.4610584485 1474545.4314783665 1372128.5448597863 1511671.4201816213 1341594.0244155065 1440764.9388317657 1387450.5056405952 1438153.1439113866 1386467.188696611 1.08885912412204 0.9837091509829412 1.0635271021916906 0.9896581441279515 1.0903045037818113 0.9676348891290469 1.039162665065445 1.0007092248211864 1.0372788881238253 1.0 20.402982044147436 -6.273386460977251 24.997998699206025 1.0108893113125392 1.0380593622973207 0.15783310814132112 0.038528366369680794 1755.426658232875 3673036.1339218747 0.012489266078714636 0.011092513342723815 5.328605135766046e-07 6.273386460977251 0.027170050984781424 EYIPGQPPLSQSS(ph)DS(ph)SPTR ddPTM_KYSE-520_SHP099_60min_R1 1 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 2 EYIPGQPPLSQS(0.408)S(0.592)DS(0.751)S(0.248)PT(0.001)R 201.61 3.2335000000000004e-11 0.0 219200.0 204060.0 185180.0 212610.0 221030.0 196060.0 187970.0 173570.0 215380.0 205620.0 True False 207040.5390356335 194256.6512996953 197116.9990984758 232816.39047647265 238423.803511331 194836.3168152356 206971.84201041423 172967.92618154266 176272.42128796288 203798.36676993943 1.015908725457815 0.9531806087483743 0.967215793838986 1.1423859482607661 1.1699004623549263 0.9560249176833651 1.0155716421616725 0.8487208652501119 0.8649353970876048 1.0 17.636782964299957 -7.1485407845504625 4.580715680468958 0.8932673704930846 1.034770321521854 0.35053072072762026 0.07876637111230045 0.2566097603974161 8.536543779891247 0.04202230108120365 0.023498002400012624 7.103284599974722e-08 7.1485407845504625 0.14150295102876942 EYIPGQPPLSQSSDS(ph)SPTR ddPTM_KYSE-520_SHP099_60min_R1 3 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 EYIPGQPPLSQSS(0.001)DS(0.675)S(0.321)PT(0.002)R;EYIPGQPPLSQSSDS(0.499)S(0.499)PT(0.002)R;EYIPGQPPLS(0.001)QS(0.003)S(0.003)DS(0.496)S(0.496)PT(0.002)R 186.45 8.0054e-11 17610310000.0 2176120.0 2408090.0 1909220.0 1360590.0 1581670.0 2369060.0 1878280.0 2117610.0 2508740.0 2281500.0 True False 2055406.2856123287 2292401.7417832213 2032291.3760600085 1489900.0645236995 1706138.4305287346 2354273.817781811 2068154.8726462778 2110264.505163891 2053216.0561888928 2261287.6849801415 0.9089539112005464 1.013759442024889 0.8987318993327715 0.6588724090348477 0.7544986168107655 1.0411208770203364 0.9145916666788199 0.9332136371593175 0.907985335004787 1.0 21.108713115280004 -6.2632647802915615 24.99697289929297 0.952408737041692 0.8486562570153726 0.2536833372161488 0.09601708880076658 305.0207697410872 4176919.8894218877 0.03735995995943903 0.03463744752790229 5.454252253120307e-07 6.2632647802915615 -0.10375248002631943 EYIPGQPPLSQSSDSS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 8 EYIPGQPPLSQSSDSSPTR 19 0 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 1 EYIPGQPPLSQSSDS(0.01)S(0.979)PT(0.01)R;EYIPGQPPLSQSSDS(0.017)S(0.718)PT(0.264)R;EYIPGQPPLSQSSDS(0.017)S(0.882)PT(0.101)R;EYIPGQPPLSQSSDS(0.064)S(0.721)PT(0.215)R;EYIPGQPPLSQSSDS(0.022)S(0.838)PT(0.139)R;EYIPGQPPLSQSSDS(0.079)S(0.913)PT(0.008)R;EYIPGQPPLSQSSDS(0.03)S(0.962)PT(0.009)R;EYIPGQPPLSQSSDS(0.027)S(0.966)PT(0.008)R 321.26 1.2402e-53 51908600000.0 5281110.0 5865560.0 4198960.0 3242120.0 3495330.0 5426340.0 3805370.0 5027580.0 5960560.0 5559450.0 True False 4988156.300668225 5583769.693214947 4469631.68017354 3550250.1100210776 3770392.585292762 5392472.19926138 4190053.936432249 5010140.498426 4878272.557489929 5510197.598186652 0.9052590604572465 1.01335198851172 0.8111563334215905 0.6443054077025164 0.684257237260159 0.9786349950564361 0.7604180905982666 0.9092487899299263 0.8853171724903871 1.0 22.39367262474719 -8.030423922640383 1.0541430810428516 0.9976290966871033 0.8270248922244884 0.1720524060600297 0.11218619266277523 1.1256911712511095 2.8017353129291744 0.11656512005887598 0.03817670905647241 9.323437789805375e-09 8.030423922640383 -0.17060420446261493 EYQAAYGK ddPTM_KYSE-520_SHP099_60min_R1 4 EYQAAYGK 8 0 P12429;D6RA82;D6RFG5;D6RAZ8;D6RCA8 P12429 ANXA3 Annexin A3;Annexin 0 ;;; 128.69 0.0062529 1250890000.0 2066130.0 2323330.0 1517220.0 1342000.0 1986580.0 2156010.0 1709110.0 1894680.0 1934510.0 1870470.0 False True 1951517.6501719567 2211713.739410572 1615022.4288378307 1469543.276512987 2142912.5439059846 2142553.5418586973 1881883.5181061842 1888107.7973016356 1583251.7490285875 1853899.0910036413 1.052655810471037 1.193006539645705 0.8711490483354785 0.7926770575832278 1.1558949213065748 1.1557012742795985 1.0150949030820189 1.018452302212131 0.8540118265937905 1.0 20.8221312885462 -7.622094473191213 8.230415312941206 0.927699006940766 1.0325190505315611 0.10518841645358379 0.12292049160618193 0.6254090365114079 45.935753507359145 0.08991061315771444 0.03363017973380423 2.3872919126997855e-08 7.622094473191213 0.10482004359079511 EYQVETIVDTLCTNMLSDKEQLR ddPTM_KYSE-520_SHP099_60min_R1 2 EYQVETIVDTLCTNMLSDKEQLR 23 1 Q86VP6-2;Q86VP6 Q86VP6-2 CAND1 Cullin-associated NEDD8-dissociated protein 1 0 ; 286.38 3.9171e-48 311520000.0 279010.0 212431.0 155336.0 304200.0 194931.0 167078.0 172859.0 237222.0 195778.0 116326.0 False True 263532.7591073545 202225.4958945684 165349.20710638774 333111.0765389349 210270.96069432748 166035.20422756273 190333.27466126616 236399.13225003128 160229.650361755 115295.44214025841 2.285717060582182 1.753976498468677 1.434134810856081 2.8891955341452347 1.8237577894755814 1.440084717534443 1.6508308665812066 2.050377082230611 1.3897310022614209 1.0 16.814975955929377 -5.999932207471598 24.999999995705736 1.5865622478366699 2.0618834646373085 0.2823678299236855 0.42975922838651276 3.936635004148084 1450538.3336188903 0.13446077265180814 0.15095384649071558 1.0001561102492509e-06 5.999932207471598 0.47532121680063866 EYRPETGSWVFK ddPTM_KYSE-520_SHP099_60min_R1 1 EYRPETGSWVFK 12 1 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 0 135.02 0.00047291 0.0 229950.0 200870.0 165230.0 133450.0 187500.0 173510.0 161340.0 166450.0 172150.0 142100.0 False True 217194.21510603942 191219.90368798326 175880.99017734753 146133.04787679442 202255.1832709341 172427.05972973365 177649.82172666004 165872.6237997221 140891.89954834632 140841.10455212698 1.5421223498403709 1.3576995458538914 1.2487901932936905 1.0375738555977372 1.4360522371228424 1.224266596588046 1.261349250927734 1.1777287910883334 1.0003606546283548 1.0 17.103708921189767 -1.0000000000000007 0.13223086767762054 0.938157302554296 2.6342628431569324 0.5381684559642506 0.11828011971150716 73.46121153761572 0.656471281960988 0.6392912747786358 23.30026521228814 0.09999999999999985 1.0000000000000007 1.6961055406026364 EYTINIHK ddPTM_KYSE-520_SHP099_60min_R1 2 EYTINIHK 8 0 H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899;P62899-2;B8ZZK4 H7C2W9 RPL31 60S ribosomal protein L31 0 ; 152.63 0.00061929 1110540000.0 1567190.0 1382980.0 1003340.0 972370.0 1497410.0 1442630.0 1128620.0 1336150.0 1080030.0 1292110.0 False True 1480254.8465841904 1316539.5649046996 1068016.901800761 1064783.7524463001 1615247.647902554 1433626.011053571 1242711.9238697344 1331515.207509754 883923.7773406929 1280662.910646369 1.1558504851499796 1.0280141276522352 0.8339562994462902 0.8314317089958422 1.261259020211115 1.1194405640513156 0.9703661389260659 1.0397077923008788 0.6902079930577234 1.0 20.28845935637288 -7.725131127416444 24.99893141686912 0.8451035837437351 1.0254849637561128 0.20853738870506633 0.1438695559846448 246.62485907154897 169806.36424587047 0.10105627689320784 0.038193026019825334 1.8830804413390074e-08 7.725131127416444 0.1803813800123777 EYTVTEPERDGAS(ph)PSRIYT(ph)Y(ph)QWR ddPTM_KYSE-520_SHP099_60min_R1 1 EYTVTEPERDGASPSRIYTYQWR 23 2 P14543-2;P14543 P14543-2 NID1 Nidogen-1 3 EY(0.028)T(0.029)VT(0.029)EPERDGAS(0.466)PS(0.466)RIY(0.549)T(0.585)Y(0.847)QWR 41.136 0.050206 346190000.0 123400.0 138880.0 117790.0 101230.0 119750.0 135450.0 105230.0 123320.0 166970.0 144960.0 True False 116554.75600819872 132207.99633686995 125382.93187066364 110850.86876409083 129173.64371570322 134604.6063073738 115867.67534583116 122892.23170310442 136652.4569711725 143675.76717717334 0.8112346173483074 0.9201829851643532 0.872679745054349 0.7715349007142966 0.8990635390616228 0.9368636684666978 0.8064524562652885 0.8553441830699274 0.9511169465527192 1.0 17.13245722710586 -7.901890514508806 3.516768252725961 0.9983883462765627 0.8608388533484923 0.48141529971359553 0.0494604859380621 0.18756986059737366 4.329610865012434 0.047948026878554144 0.012775720625565489 1.2534571312300163e-08 7.901890514508806 -0.1375494929280704 EYVEHTVK ddPTM_KYSE-520_SHP099_60min_R1 1 EYVEHTVK 8 0 O75937 O75937 DNAJC8 DnaJ homolog subfamily C member 8 0 68.22399999999999 0.023324 0.0 404990.0 417520.0 380110.0 293000.0 447880.0 439390.0 384680.0 364550.0 447990.0 432000.0 False True 382524.3973724501 397461.71248970274 404612.498797503 320846.6319063375 483125.60791139177 436647.6040265554 423567.20851500845 363285.4611366092 366646.3089088792 428172.81609091413 0.8933878634911482 0.9282740462563824 0.9449747475598531 0.7493390982537574 1.1283425517812637 1.0197929144895592 0.9892435778199246 0.8484552206123067 0.8563044993286753 1.0 18.70783367899782 -5.752218274629346 24.99999698912566 0.9691954111874584 0.8872269255617269 0.20763458807016932 0.08979536098345643 407.30824144543595 1104276.9825471672 0.02866889061277363 0.03649114707387804 1.7692195323284223e-06 5.752218274629346 -0.08196848562573156 EYVEPELHINDLWR ddPTM_KYSE-520_SHP099_60min_R1 1 EYVEPELHINDLWR 14 0 Q7KZ85;Q7KZ85-3 Q7KZ85 SUPT6H Transcription elongation factor SPT6 0 110.98 0.00028402 139940000.0 132220.0 129640.0 83551.0 76777.0 130970.0 111350.0 109150.0 95781.0 102350.0 116160.0 False True 124885.4930259647 123411.89980639283 88936.83114632664 84073.86299615323 141276.59388263567 110655.02334681459 120183.9472013445 95448.75806645348 83765.8200335361 115130.91277111245 1.0847259873136328 1.0719267035756375 0.772484374575738 0.7302457782411349 1.2270952299622822 0.9611234783381227 1.0438894672908379 0.8290454385279795 0.7275701895985821 1.0 16.812915725055376 -7.278178837126082 23.269588415110185 0.8337307931488716 0.9783595590328924 0.13389423335199646 0.15146347325452617 691.3423595291625 961026.7790581937 0.08571781037894194 0.04140293745706829 5.2701279934531923e-08 7.278178837126082 0.14462876588402085 EYVSNDAAQS(ph)DDEEKLQSQPTDTDGGR ddPTM_KYSE-520_SHP099_60min_R1 4 EYVSNDAAQSDDEEKLQSQPTDTDGGR 27 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 EYVSNDAAQS(1)DDEEKLQSQPTDTDGGR;EYVS(0.002)NDAAQS(0.998)DDEEKLQSQPTDTDGGR;EYVSNDAAQS(1)DDEEKLQSQPTDTDGGR;EYVSNDAAQS(1)DDEEKLQSQPTDTDGGR 235.35 5.6847999999999995e-31 5149420000.0 5752390.0 4915570.0 4273330.0 4906620.0 4957150.0 4931390.0 4664430.0 5232500.0 5943090.0 5092990.0 True False 5433293.459594826 4679418.638779007 4548795.689369751 5372943.689570903 5347249.502674719 4900611.365803765 5135956.104849909 5214349.678774683 4863974.669107063 5047870.07088626 1.0763536666546762 0.9270085349002329 0.9011316902954901 1.0643981746993676 1.059308070054168 0.9708275563723769 1.0174501389153592 1.032980168972375 0.9635697038163048 1.0 22.267243346027275 -5.271912940349796 24.947197571498435 1.0169236377002704 0.964049017626361 0.14436409258271132 0.0524492012694537 1196.858736139427 2850819.867560843 0.014892369151778797 0.022380004709635647 5.346715301141853e-06 5.271912940349796 -0.05287462007390942 EYVTCHTCR ddPTM_KYSE-520_SHP099_60min_R1 1 EYVTCHTCR 9 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 118.71 0.0013373 460210000.0 343200.0 325830.0 206580.0 188720.0 288190.0 276470.0 181350.0 215520.0 238960.0 243540.0 False True 324162.0118477613 310176.6377191991 219896.4773396866 206655.89205926293 310868.91342320194 274744.4481786606 199682.62780544037 214772.41142274594 195570.8876913899 241382.42507125263 1.3429395771132604 1.285000917641951 0.9109879365690203 0.856134791082081 1.287868879979302 1.138212312257448 0.8272459262371605 0.8897599374078217 0.8102117941422627 1.0 17.880961112478474 -1.0000000000069094 0.46909131030947854 0.9339884089620626 12.338173063822461 0.42017973191537206 0.1513955261209992 100.40835853847088 1.1592293845385082 0.09839395186472596 1109.3596148854372 0.09999999999840906 1.0000000000069094 11.4041846548604 EYWDYESHVVEWGNQDDYQLVR ddPTM_KYSE-520_SHP099_60min_R1 7 EYWDYESHVVEWGNQDDYQLVR 22 0 P68400;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8Y5A0;A0A2R8YDP2;Q8NEV1;A0A2R8YF43;A0A2R8Y4H0;A0A2R8Y4D6;A0A2R8Y7T1;A0A2R8YEW1;V9GYA2;A0A2R8YDY7;A0A2R8YCK2;A0A2R8YF47;V9GY80;A0A2R8YEL7;A0A2R8Y797;A0A2R8Y3W6 P68400 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 0 ;;;;;; 267.32 7.759599999999999e-36 5405614000.0 2600760.0 2137710.0 1434488.0 2184420.0 1528002.0 1823729.0 1646789.0 1830670.0 1490452.0 1367044.0 False True 2456490.658313477 2035011.2028318725 1526957.3917419505 2392026.6200301778 1648247.0642578865 1812346.4308330766 1813262.5032318367 1824319.8330515889 1219823.488037362 1354933.0537041381 1.8129978094473986 1.5019274917447216 1.1269615037935117 1.7654205228006035 1.2164785999956838 1.3375911273833452 1.338267228978369 1.3464280231884767 0.9002832167261612 1.0 20.36979014010992 -1.000000000139569 0.1200461750758301 0.8270311646928322 3.4853293690812825 0.494989303638771 0.2010355916283346 85.9361373573921 0.7106420762128384 1.3816700680786211 38.20820302192017 0.09999999996786305 1.000000000139569 2.6582982043884504 EYWMDPEGEMKPGR ddPTM_KYSE-520_SHP099_60min_R1 6 EYWMDPEGEMKPGR 14 1 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 0 ;;;;; 125.61 7.2777e-05 6234910000.0 11511110.0 9831610.0 5588300.0 6941090.0 11094530.0 10132640.0 8347660.0 8956200.0 7279250.0 8851050.0 False True 10872565.781471118 9359284.698052531 5948530.759596138 7600769.1066852 11967606.391759332 10069398.435248023 9191522.93811064 8925133.032592796 5957521.69495963 8772636.583012696 1.2393726422595366 1.0668724971664525 0.6780778735454348 0.8664178704727497 1.364197214658745 1.1478189413142192 1.0477491973062094 1.0173831946800798 0.6791027576014895 1.0 23.06457907374713 -7.600546128912646 9.343101767873165 0.8402895755550691 1.0507261159973027 0.167965200181582 0.1918034528085085 0.6369215444182258 70.39531771724693 0.13925815435995914 0.05235621513117671 2.5087296987154193e-08 7.600546128912646 0.2104365404422336 EYWMDPEGEMKPGRK ddPTM_KYSE-520_SHP099_60min_R1 2 EYWMDPEGEMKPGRK 15 2 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 0 ; 80.706 0.0054543 1410140000.0 3226000.0 2842500.0 1897220.0 1537570.0 2882100.0 2592900.0 1615000.0 1907620.0 2321900.0 1960690.0 False True 3047047.3491284396 2705942.033320515 2019517.8368593268 1683700.1905127221 3108904.87309418 2576716.749312584 1778259.9608810951 1901002.911461856 1900301.4903357846 1943319.8119937356 1.5679598027677917 1.3924326899875386 1.0392102341546223 0.8664040679878323 1.5997906540687301 1.32593551169996 0.9150629504758157 0.9782244279759259 0.977863488349961 1.0 20.89009191399923 -1.0000000000118816 0.6536281337257805 1.0807280200217788 47.92266508059659 0.3400531370124392 0.21394994911151854 291.728843621038 1.8573954465583347 0.09752794894988838 19787.803474465687 0.09999999999726415 1.0000000000118816 46.84193706057481 EYYDHLPELK ddPTM_KYSE-520_SHP099_60min_R1 1 EYYDHLPELK 10 0 P11216;H0Y4Z6 P11216 PYGB Glycogen phosphorylase, brain form;Alpha-1,4 glucan phosphorylase 0 108.48 0.00144 526070000.0 1666600.0 1445700.0 968200.0 926300.0 1638200.0 1524500.0 1178600.0 1213500.0 1153300.0 1329700.0 False True 1574150.3757152685 1376246.4019600595 1030611.7211747721 1014335.2734977505 1767117.019917036 1514985.0300154376 1297744.3900275286 1209290.6517330303 943889.7923270847 1317919.8924909455 1.1944203776604605 1.0442564907028404 0.781998759595969 0.7696486556406684 1.3408379598680171 1.1495274019667672 0.9846914045547306 0.9175752324728936 0.7161966350952317 1.0 20.32983125058185 -7.296321718104142 3.1444588452671707 0.8514498720358825 1.0360387652063023 0.15278785814029505 0.1759532967056787 0.5297969485848043 10.575636133296403 0.11717534191726668 0.05250001276863568 5.054500942892239e-08 7.296321718104142 0.18458889317041982 FADQDDIGNVS(ph)FDR ddPTM_KYSE-520_SHP099_60min_R1 2 FADQDDIGNVSFDR 14 0 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YEN2;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-3 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 FADQDDIGNVS(1)FDR;FADQDDIGNVS(1)FDR 217.88 6.5826e-14 228930000.0 284700.0 269330.0 242670.0 247870.0 270360.0 243380.0 229600.0 284900.0 293240.0 251180.0 True False 268907.12346462073 256390.98252742796 258312.89648572847 271427.4902751669 291635.79386202485 241860.9751427728 252810.20868006122 283911.7483961596 239995.00797883858 248954.74061508293 1.0801446190590394 1.0298698546329048 1.0375897877964673 1.090268414269041 1.1714410143044132 0.9715058028026144 1.0154866224095702 1.140415111978626 0.9640105964075724 1.0 17.925523962010903 -6.297763264546728 24.999757234353282 1.0268847785047621 1.0769817327032976 0.22230613120525833 0.05800189914986773 1224.0765845941787 842461.9812674939 0.021051765131061537 0.018566427726960946 5.037751435630795e-07 6.297763264546728 0.05009695419853544 FADQHVPGS(ph)PFSVK ddPTM_KYSE-520_SHP099_60min_R1 3 FADQHVPGSPFSVK 14 0 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 FADQHVPGS(0.987)PFS(0.013)VK;FADQHVPGS(0.999)PFS(0.001)VK;FADQHVPGS(0.992)PFS(0.008)VK 83.404 0.0034551 685880000.0 1216260.0 1112390.0 1027280.0 1022350.0 1016520.0 1158680.0 1000530.0 1106530.0 1278730.0 1174020.0 True False 1148791.6332457997 1058949.114668568 1093500.112506114 1119513.836619265 1096514.340792372 1151448.2483294762 1101673.3366318026 1102691.7056960436 1046544.8661600747 1163619.0961737377 0.9872574599568756 0.9100478998244785 0.9397406042078615 0.9620964801114887 0.9423309950807592 0.9895405224232894 0.9467645729211323 0.9476397468226173 0.8993878405754672 1.0 20.15018744716335 -12.899553336981377 7.594872223146226 0.9520376903834524 0.950349447140686 0.0 0.031495474207070565 0.0 0.0 0.0 0.006861508578232243 1.2602208569638142e-13 12.899553336981377 -0.0016882432427663963 FAEEDKK ddPTM_KYSE-520_SHP099_60min_R1 5 FAEEDKK 7 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ;;;; 113.89 0.0057962 4972840000.0 5910440.0 6168870.0 3723650.0 3539400.0 6109790.0 5960170.0 4671570.0 5698610.0 5785100.0 5742220.0 False True 5582576.111029973 5872508.225537354 3963682.4370506536 3875783.511840591 6590595.713050232 5922970.368217197 5143817.885729598 5678842.851975569 4734671.670503265 5691348.398179565 0.9808881341398141 1.0318307393403883 0.6964399575886934 0.6809956517651071 1.158002506955698 1.0406972045696095 0.9037959945265168 0.9978027094233072 0.8319068416225754 1.0 22.440339066654705 -5.760896024278164 24.99999970477735 0.9869455633225506 0.849909615292983 0.22380083860741717 0.1287340284452101 26.01333237802491 1196846.1463406766 0.04211262506914782 0.05113134550696802 1.7342191425725297e-06 5.760896024278164 -0.13703594802956753 FAELPEFRPEEVLPS(ph)PTLQS(ph)LATSPR ddPTM_KYSE-520_SHP099_60min_R1 1 FAELPEFRPEEVLPSPTLQSLATSPR 26 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L373;I3L135;I3L1Q4 I3L2J0 CIC Protein capicua homolog 2 FAELPEFRPEEVLPS(0.998)PT(0.018)LQS(0.833)LAT(0.078)S(0.073)PR 91.109 0.0034170999999999997 83457000.0 13812.0 30592.0 23121.0 42040.0 69217.0 103690.0 100150.0 126690.0 163460.0 126580.0 True False 13045.820826460616 29122.314400471823 24611.416654907993 46035.46896021312 74663.98410914255 103042.83224814752 110274.13936980892 126250.54195966841 133779.78449127325 125458.59967774991 0.10398506646790107 0.23212688867303424 0.19617161930807706 0.3669375322095 0.595128467087332 0.8213293669212073 0.8789683581122104 1.0063123794140272 1.0663261413318572 1.0 16.936851839462243 -6.003099935242393 0.8627215086963934 1.0353884655182763 0.12754120933629448 0.9892398951778432 0.036835380527324386 0.05467666978007917 0.08956271393364437 0.02105182631052045 0.02603746867096476 9.928875493743965e-07 6.003099935242393 -0.9078472561819819 down FAELPEFRPEEVLPS(ph)PTLQSLAT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 FAELPEFRPEEVLPSPTLQSLATSPR 26 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L373;I3L135;I3L1Q4 I3L2J0 CIC Protein capicua homolog 2 FAELPEFRPEEVLPS(0.938)PT(0.124)LQS(0.107)LAT(0.428)S(0.404)PR 54.841 0.053989999999999996 42392000.0 14886.0 19386.0 21116.0 36541.0 44750.0 85871.0 89886.0 92270.0 123690.0 102180.0 True False 14060.243905494704 18454.667461020752 22477.171146794557 40013.84565354776 48271.57040732955 85335.04723676984 98972.55408282242 91949.93690597983 101231.01397115854 101274.76469483705 0.13883264945479049 0.18222375057230386 0.22194246725255964 0.39510183779856906 0.47663966984057987 0.8426091879245826 0.9772676775013825 0.9079254558926406 0.9995679997498849 1.0 16.627915207459324 -6.04060206843486 1.0756570231944234 0.9916424165776646 0.16356661591545246 0.9839368499049628 0.04392218987686892 0.05697058587406175 0.14013090327323255 0.022164903591906662 0.024872204103781527 9.107473821172143e-07 6.04060206843486 -0.8280758006622122 down FAELPEFRPEEVLPS(ph)PTLQSLATS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 FAELPEFRPEEVLPSPTLQSLATSPR 26 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L373;I3L135;I3L1Q4 I3L2J0 CIC Protein capicua homolog 2 FAELPEFRPEEVLPS(0.988)PT(0.012)LQSLAT(0.187)S(0.813)PR;FAELPEFRPEEVLPS(0.998)PT(0.002)LQSLAT(0.06)S(0.94)PR;FAELPEFRPEEVLPS(0.999)PT(0.001)LQSLAT(0.085)S(0.915)PR;FAELPEFRPEEVLPS(0.999)PT(0.001)LQSLAT(0.03)S(0.97)PR;FAELPEFRPEEVLPS(0.995)PT(0.005)LQS(0.009)LAT(0.483)S(0.507)PR 231.54 4.72e-23 5485330000.0 415082.0 463268.0 489442.0 1196780.0 1692140.0 2919230.0 3019150.0 3676570.0 4406930.0 3588930.0 True False 392056.5740145468 441011.9099005557 520992.2144548886 1310521.6113749738 1825301.791040416 2901010.002736613 3324355.1460644943 3663816.836787887 3606742.601664787 3557134.872345289 0.11021695496073675 0.12397953007887717 0.14646400351735558 0.36842055710722066 0.5131382015427935 0.8155468113650467 0.9345597694114649 1.0299909810201433 1.0139459793063148 1.0 21.762284245994056 -6.024626220690733 0.9592011718789872 1.0325363348093965 0.09297384218312095 0.995194214501187 0.02600953171089167 0.0324243661693482 0.0646502791753201 0.013635532427739901 0.01595523042033802 9.44873740208955e-07 6.024626220690733 -0.9395624926262756 down FAELPEFRPEEVLPSPTLQSLAT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 FAELPEFRPEEVLPSPTLQSLATSPR 26 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L373;I3L135;I3L1Q4 I3L2J0 CIC Protein capicua homolog 1 FAELPEFRPEEVLPSPTLQSLAT(0.825)S(0.175)PR 207.39 1.5306e-16 917580000.0 262230.0 265430.0 249150.0 177250.0 194980.0 166140.0 100230.0 98999.0 138130.0 111610.0 True False 247683.57915745478 252678.3443814474 265210.60765409505 194095.78670784406 210323.81671555556 165103.05863349623 110362.22655053384 98655.59557554024 113049.07397393593 110621.22223126616 2.23902406935664 2.284176031369413 2.3974658958264112 1.754598103265076 1.9012971695055931 1.4925079953313989 0.9976587161531189 0.8918324493765724 1.0219474319095305 1.0 16.755268661733872 -6.2318035592242 0.9280694348311231 0.9041335949609752 2.298624380801447 0.9386433876345195 0.1400573763652053 0.12511987798255922 0.23109932423207935 0.08532393410047687 0.08087140272107052 5.864033474370644e-07 6.2318035592242 1.3944907858404718 up FAELPEFRPEEVLPSPTLQSLATS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 FAELPEFRPEEVLPSPTLQSLATSPR 26 1 I3L2J0;A0A0A0MQR4;Q96RK0;I3L373;I3L135;I3L1Q4 I3L2J0 CIC Protein capicua homolog 1 FAELPEFRPEEVLPSPTLQSLAT(0.214)S(0.786)PR;FAELPEFRPEEVLPSPTLQSLAT(0.165)S(0.835)PR;FAELPEFRPEEVLPSPTLQSLAT(0.254)S(0.746)PR 227.49 3.0469e-22 3269230000.0 790870.0 862170.0 841080.0 669210.0 641810.0 422070.0 337596.0 342110.0 417690.0 398880.0 True False 746998.864539741 820750.059056447 895297.3625755818 732811.5171946768 692316.7956006303 419435.70457108255 371723.4982994517 340923.30025907425 341848.02510803804 395346.23352394404 1.88948015991279 2.0760285275532757 2.2645905959323076 1.8535942802912633 1.7511657805099599 1.0609325927615787 0.9402479820942531 0.8623410857370071 0.864680111053427 1.0 18.592757154551126 -6.176056725910819 1.737412793794844 0.891344838802156 2.060013549966461 0.9587893779593347 0.10748609717624673 0.06525912102230015 0.3904880377649846 0.044590582408765976 0.043280406869366114 6.667196791106777e-07 6.176056725910819 1.168668711164305 FAFS(ph)SEDEGVGPGPAGPK ddPTM_KYSE-520_SHP099_60min_R1 1 FAFSSEDEGVGPGPAGPK 18 0 O60307 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 FAFS(0.719)S(0.281)EDEGVGPGPAGPK 155.98 1.0714e-06 103800000.0 196640.0 206560.0 162710.0 143080.0 169090.0 191580.0 155520.0 189230.0 246910.0 204600.0 True False 185731.98720787832 196636.54754711888 173198.54694520478 156678.28018142947 182396.42100950502 190384.27815700741 171241.4793289337 188573.6052966142 202077.36809458112 202787.40317639147 0.9158950916015343 0.9696684531044447 0.854089278881641 0.772623337186015 0.8994465048248107 0.9388368072912527 0.8444384446305176 0.9299078855139064 0.9964986233331626 1.0 17.629608511692318 -7.623079310101248 3.3007491514743483 0.9997004856646776 0.8852539451013489 0.4308834168174127 0.05159069098642944 0.25790225740923683 5.288451598942134 0.045768313696677394 0.014719022613333707 2.3818844540519937e-08 7.623079310101248 -0.1144465405633287 FAFSPLS(ph)EEEEEDEQKEPMLK ddPTM_KYSE-520_SHP099_60min_R1 8 FAFSPLSEEEEEDEQKEPMLK 21 1 Q8NBN3-3;Q8NBN3 Q8NBN3-3 TMEM87A Transmembrane protein 87A 1 FAFS(0.001)PLS(0.999)EEEEEDEQKEPMLK;FAFS(0.007)PLS(0.993)EEEEEDEQKEPMLK;FAFSPLS(1)EEEEEDEQKEPMLK;FAFSPLS(1)EEEEEDEQKEPMLK;FAFSPLS(1)EEEEEDEQKEPMLK;FAFSPLS(1)EEEEEDEQKEPMLK;FAFSPLS(1)EEEEEDEQKEPMLK;FAFS(0.112)PLS(0.888)EEEEEDEQKEPMLK 314.05 6.003099999999999e-54 7678191000.0 3038888.0 3404047.0 2357271.0 2600322.0 2453100.0 3108119.0 2451921.0 3007297.0 3773720.0 3252919.0 True False 2870314.824766957 3240511.472541281 2509224.460426958 2847455.8210646827 2646145.0137702785 3088720.0764227984 2699785.1031229305 2996865.3886153954 3088507.575739676 3224100.6683926834 0.8902683631767305 1.0050900408630166 0.7782711268993614 0.8831783228667701 0.8207389551175106 0.9580098123805245 0.837376180461778 0.9295197938436047 0.9579439023159891 1.0 21.62046536018866 -7.7531321113600775 1.937983677090587 0.9961684511686371 0.8829970341239497 0.28825128998406013 0.06180742438926521 0.41360343898656 2.9877282735075164 0.056806699020186785 0.016650298575332328 1.765500677837188e-08 7.7531321113600775 -0.11317141704468736 FAFSS(ph)EDEGVGPGPAGPK ddPTM_KYSE-520_SHP099_60min_R1 2 FAFSSEDEGVGPGPAGPK 18 0 O60307 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 FAFS(0.018)S(0.982)EDEGVGPGPAGPK;FAFS(0.031)S(0.969)EDEGVGPGPAGPK 246.66 8.251400000000001e-24 132360000.0 380320.0 356420.0 335020.0 290544.0 346060.0 353400.0 304506.0 365220.0 440120.0 404540.0 True False 359222.8914508762 339297.0482026731 356615.9252509526 318157.2144047608 373292.9531879431 351194.2995129265 335288.4381721729 363953.1370629887 360205.30252232443 400956.0903273579 0.8959157875806079 0.8462199637014026 0.8894139130292196 0.7934964004287939 0.9310070658439695 0.8758921687065442 0.8362223352148833 0.9077132031236679 0.8983659587967282 1.0 18.61308472673907 -8.392635189461625 0.9071904188775899 1.000352281802475 0.8667506715369325 0.5348215964644503 0.036382239835034115 0.9881142674060326 1.4049960263324663 0.03433254113442299 0.011369339583743622 4.04915881179711e-09 8.392635189461625 -0.13360161026554251 FAGHSEAGGGS(ph)GDR ddPTM_KYSE-520_SHP099_60min_R1 2 FAGHSEAGGGSGDR 14 0 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 FAGHS(0.002)EAGGGS(0.998)GDR;FAGHSEAGGGS(1)GDR 113.35 0.00015129 11395000.0 30598.0 27376.0 24880.0 24454.0 25822.0 21616.0 19838.3 22377.0 21338.2 20934.9 True False 28900.667944399225 26060.815867786252 26483.804609407507 26778.100807636813 27854.044492917626 21481.086525951934 21843.748967150113 22299.37940983106 17463.720772248158 20749.43307310575 1.392841329330518 1.2559772489189027 1.2763628054847593 1.2905461423109956 1.3424002667822514 1.0352613707694267 1.0527395563140833 1.0746982498878133 0.8416480927801181 1.0 14.34078429847685 -6.304191472594701 5.544044942747759 1.0061950934446762 1.3056119094623568 0.8367123762620506 0.0686269584585725 0.08283559631405629 6.590633373399779 0.024242539225504817 0.021644926139654262 4.963734311190793e-07 6.304191472594701 0.29941681601768066 FAGVFHVEK ddPTM_KYSE-520_SHP099_60min_R1 1 FAGVFHVEK 9 0 P16070;P16070-14;H0YD13;P16070-8;P16070-7;P16070-5;P16070-3;P16070-6;P16070-17;P16070-4;P16070-16;P16070-10;P16070-11;P16070-13;P16070-12;P16070-18;Q86UZ1;H0Y5E4;H0YCV9;P16070-15;P16070-19;P16070-9;H0YDW7;E9PKC6 P16070 CD44 CD44 antigen 0 69.954 0.039809 210340000.0 371270.0 480180.0 274990.0 414450.0 594740.0 534230.0 385480.0 536060.0 522660.0 352090.0 False True 350674.9129916038 457111.43203512585 292716.2953995566 453839.20339106367 641542.6543922938 530895.6724074439 424448.0803222567 534200.5329773444 427758.11918639956 348970.7565218747 1.0048833790163798 1.3098846350080127 0.8387989249214013 1.3005078359986175 1.8383851437479395 1.5213185130432714 1.2162855264797836 1.530788821108163 1.225770673307367 1.0 18.41274661921403 -5.512950237438923 24.958976083929397 1.4274968922016908 1.0758243125668934 0.2754686615040226 0.23923964148901045 564.4955622024353 1419069.5999041272 0.06787635988576803 0.09324158326342627 3.069373664846886e-06 5.512950237438923 -0.3516725796347975 FAHEHEEMK ddPTM_KYSE-520_SHP099_60min_R1 4 FAHEHEEMK 9 0 P48163;P48163-2 P48163 ME1 NADP-dependent malic enzyme 0 ;;; 188.66 5.9887e-06 2313750000.0 3677920.0 3272250.0 2403710.0 2153770.0 3525530.0 3217350.0 2487370.0 2947980.0 2938630.0 2244750.0 False True 3473898.4458482494 3115046.1982526123 2558656.9926719815 2358463.6532454356 3802969.153478269 3197269.3252346157 2738817.6339918296 2937754.145443701 2405048.868833906 2224863.261389074 1.5613986289114017 1.400106807601183 1.1500288746169984 1.060048810268434 1.7093046658085038 1.437063293156465 1.2310049257956972 1.3204200889224715 1.0809872725986471 1.0 21.085285241053608 -7.784949261970664 1.557325598900092 0.9929121075117575 1.3653302890022705 0.34185128095116224 0.17914653868891253 0.4660407082474912 2.2907444264058974 0.17928224599352982 0.054182423383264317 1.640781452251712e-08 7.784949261970664 0.372418181490513 FAHTNVESLVNEYDDNGEGIILFR ddPTM_KYSE-520_SHP099_60min_R1 4 FAHTNVESLVNEYDDNGEGIILFR 24 0 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ;;; 351.26 5.578999999999999e-73 755505000.0 309519.0 262357.0 160460.0 351432.0 239838.0 212808.0 237112.0 274245.0 219103.0 163641.0 False True 292349.36405917065 249752.9759141143 170803.50834507737 384831.99161811674 258711.8861084491 211479.78633488066 261081.59495011644 273293.7081042642 179319.41833715554 162191.2680507716 1.8024975547244315 1.5398669664259161 1.0530992845534066 2.3727047469513014 1.5951036650595958 1.303891318419682 1.6097142471836934 1.6850087639657247 1.1056046388454293 1.0 17.307336625194512 -7.820378054431789 5.24425674168472 1.0187060465813256 1.6121659843111797 0.33260252480090735 0.3219722225467158 0.24111767217934726 12.758544480091686 0.3041981406279558 0.08109234328298173 1.5122442628898594e-08 7.820378054431789 0.5934599377298542 FAHTVVTS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 FAHTVVTSR 9 0 B7ZKJ8;Q14624-4;Q14624-3;Q14624-2;Q14624 B7ZKJ8 ITIH4 Inter-alpha-trypsin inhibitor heavy chain H4;70 kDa inter-alpha-trypsin inhibitor heavy chain H4;35 kDa inter-alpha-trypsin inhibitor heavy chain H4 1 FAHT(0.002)VVT(0.018)S(0.98)R 49.35 0.052309 316940000.0 66673.0 45144.0 40882.0 39392.0 43935.0 50306.0 51788.0 60412.0 52383.0 53943.0 True False 62974.5157806696 42975.21447747453 43517.31913351274 43135.803836363346 47392.434544045245 49992.021593936806 57023.23644217343 60202.44487226681 42871.56766796991 53465.10698701896 1.1778619613715442 0.8037992795545829 0.8139386898464173 0.8068029087987514 0.8864180250411147 0.9350401488221953 1.0665504972433397 1.1260137361528826 0.8018606916540707 1.0 15.70631002994278 -6.541952881221328 4.8532880006387265 1.0091540253867641 0.884742883569479 0.11487506042171314 0.12793735305652537 0.3511723279651745 22.01390955029584 0.049049643291306066 0.03888585317334909 2.8710920642532135e-07 6.541952881221328 -0.12441114181728508 FAIDIGFLS(ph)S(ph)SSPK ddPTM_KYSE-520_SHP099_60min_R1 2 FAIDIGFLSSSSPK 14 0 D6RJF3 D6RJF3 PANK4 2 FAIDIGFLS(0.641)S(0.698)S(0.643)S(0.019)PK;FAIDIGFLS(0.634)S(0.692)S(0.639)S(0.036)PK 59.607 0.039381 299010000.0 585130.0 809480.0 611840.0 602940.0 748770.0 628350.0 615320.0 698930.0 790620.0 898210.0 True False 552671.6724722638 770591.3657457493 651280.1853786123 660243.2363194784 807693.9390814787 624428.2345754025 677522.5505444919 696505.5749614874 647063.3379082972 890252.558196805 0.6208032399162021 0.8655873646761231 0.7315678897882325 0.7416358765166511 0.9072638226588783 0.7014057177663985 0.761045328436691 0.7823685184036432 0.7268312030677178 1.0 19.763855150706185 -10.562438792038135 2.69933450632418 1.0154885682676225 0.7648941569230151 0.4685385181409817 0.07656485047920923 15690711.41974943 15328763.37169409 1750143.6607389892 0.018287068063391206 2.7388056048522658e-11 10.562438792038135 -0.25059441134460736 FAIGS(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 4 FAIGSAR 7 0 O96017-13;O96017-4;O96017;O96017-9;O96017-12;B7ZBF2;A0A087X102;H0Y4V6;B7ZBF7;B7ZBF6;O96017-8;O96017-7 O96017-13 CHEK2 Serine/threonine-protein kinase Chk2 1 FAIGS(1)AR;FAIGS(1)AR;FAIGS(1)AR;FAIGS(1)AR 107.1 0.0035869 832860000.0 1600940.0 1384390.0 1206150.0 1103190.0 1253100.0 1252100.0 1087980.0 1207790.0 1456670.0 1261860.0 True False 1512132.66680523 1317881.8263882454 1283900.3589082349 1208036.8459138335 1351711.840836306 1244285.179457089 1197963.6360615569 1203600.4583903058 1192175.4476624434 1250680.902112224 1.2090475390257027 1.0537314707232905 1.0265610970311516 0.9659033282379457 1.0807807479537388 0.9948862074696003 0.9578491476429879 0.9623561504438055 0.9532211179118726 1.0 20.254282317530265 -1.0000000000965112 0.7327172688349405 0.9829010422684706 36.152101436556464 0.7830706822671006 0.0349206866542695 163.2561263488974 0.7561609362033669 0.014033903993903403 9454.419194662229 0.09999999997777746 1.0000000000965112 35.16920039428799 FAILKES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 FAILKESPR 9 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 FAILKES(1)PR 69.45100000000001 0.015790000000000002 371490000.0 467510.0 507000.0 544700.0 305510.0 370460.0 436940.0 342290.0 370050.0 429330.0 460680.0 True False 441576.28834192024 482642.95897748525 579812.2335508144 334545.57854506915 399613.0943709344 434212.89538533695 376892.01362847694 368766.3829203193 351374.49452855944 456598.7336036169 0.9670992401947003 1.0570396355861948 1.269850726423963 0.7326905528290302 0.8751953629329315 0.9509726230697049 0.8254337690644252 0.8076377698420277 0.7695476764804065 1.0 18.800567332627732 -5.270229689319361 24.991915160801785 0.8476530336660488 1.0939008482795154 0.5492796696899516 0.10220110110391664 464.181454895957 1319723.3831937893 0.028731885468522754 0.04337758195295987 5.367478465161253e-06 5.270229689319361 0.24624781461346656 FAIQDIS(ph)VEETSAK ddPTM_KYSE-520_SHP099_60min_R1 4 FAIQDISVEETSAK 14 0 P12814-3;P12814;P12814-2;P12814-4;H9KV75;G3V2N5;A0A494C1A0;P35609;P35609-2;G3V2W4;Q08043;G3V2X9;A0A087WSZ2;G3V5M4;A0A494C033;A0A494C166;G3V2E8;O43707 P12814-3;O43707 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 1 FAIQDIS(1)VEETSAK;FAIQDIS(1)VEETSAK;FAIQDIS(1)VEETSAK;FAIQDIS(1)VEETSAK 197.75 5.3714e-11 8741300000.0 9681700.0 9689900.0 7493700.0 6606200.0 6549400.0 8691900.0 6921400.0 8067200.0 9618600.0 8867100.0 True False 9144636.801009545 9224382.65916358 7976755.892343925 7234051.261773548 7064800.5190114975 8637650.628003405 7621082.658354441 8039216.766098636 7872104.7051741155 8788544.392499417 1.0405177914119699 1.0495916328346853 0.9076310633592165 0.8231227992598465 0.8038646906125833 0.9828306306759067 0.8671609675043177 0.914738141729102 0.8957233818938848 1.0 23.06719280731861 -4.786191799440303 5.587433744744249 0.8912626753368803 1.0463648739390892 0.4983887546317317 0.058134477245922446 0.12105983564460718 10.863257929680803 0.015183645279153314 0.03484092062529888 1.6360938063289758e-05 4.786191799440303 0.15510219860220886 FALKVDS(ph)PDVKR ddPTM_KYSE-520_SHP099_60min_R1 2 FALKVDSPDVKR 12 2 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 FALKVDS(1)PDVKR;FALKVDS(1)PDVKR 76.34100000000001 0.0095446 775700000.0 3109000.0 3136700.0 3008000.0 2292460.0 2862500.0 2689000.0 2065720.0 2266580.0 3556100.0 2438860.0 True False 2936537.572362155 2986008.223717314 3201900.492970168 2510334.709146767 3087762.46460292 2672216.9535660986 2274543.137084393 2258717.76300375 2910401.88198591 2417253.5978043675 1.2148239535270366 1.235289597429726 1.3246026382496685 1.0385069698218452 1.2773845770289005 1.1054764613830004 0.9409617340730815 0.9344148934374868 1.2040118110195295 1.0 21.204937405730266 -6.504180841376921 5.277727702081823 1.0145344171074775 1.2138367998171495 0.478102912869122 0.09776844504312275 0.1584303287993322 13.32621561816201 0.035932556690948324 0.02983434568465133 3.131981287413876e-07 6.504180841376921 0.19930238270967204 FALT(ph)T(ph)KIPDT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 FALTTKIPDTK 11 1 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 3 FALT(1)T(1)KIPDT(1)K 51.643 0.048760000000000005 10473000000.0 11648000.0 7830900.0 8475300.0 6796200.0 9639700.0 8784600.0 8861700.0 10915000.0 11799000.0 9338500.0 True False 11001862.220287656 7454691.809579458 9021631.398959465 7442108.804647963 10398289.547609707 8729772.052918088 9757527.117857583 10877138.412580164 9656599.02858516 9255768.15524306 1.1886492872075125 0.8054103867496555 0.974703692621021 0.8040509096408466 1.1234388516656448 0.9431709941840954 1.0542104074128407 1.1751740352764408 1.043306062405533 1.0 23.141921296618516 -6.460721632136723 1.306113029918905 1.0814770381076577 0.9494532412379714 0.1059869328372689 0.12152797162902673 0.7853690530965449 2.7252129791186808 0.062204049127996854 0.04725060245077201 3.4616118417647813e-07 6.460721632136723 -0.13202379686968635 FALVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 FALVTPK 7 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 FALVT(1)PK;FALVT(1)PK;FALVT(1)PK;FALVT(1)PK 118.18 0.012387 3519910000.0 10324400.0 10748900.0 7833000.0 6128500.0 6718700.0 9356300.0 6874200.0 7869100.0 9186400.0 9619900.0 True False 9751684.950818852 10232506.709572166 8337927.71324313 6710950.797399293 7247423.465826258 9297903.86115674 7569111.22172683 7841803.928761752 7518381.330298744 9534675.170168946 1.0227600601779139 1.073188811044819 0.8744847165145102 0.7038468199101093 0.7601122572587694 0.9751673439538884 0.7938509793609164 0.8224510839442476 0.7885304109595089 1.0 23.18475235858386 -4.845360735335634 4.804949580162172 0.8260766551540251 1.047760965881698 0.47768286226070455 0.0872278850934851 0.15413779193574814 6.196984964995162 0.022784318860086996 0.05090045487123239 1.427707577958595e-05 4.845360735335634 0.22168431072767292 FANLT(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 4 FANLTPSR 8 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 FANLT(0.832)PS(0.168)R;FANLT(0.984)PS(0.016)R;FANLT(0.935)PS(0.065)R;FANLT(0.997)PS(0.003)R 126.03 0.0040914 4958030000.0 4176620.0 4647600.0 3907200.0 3023920.0 3301160.0 5086800.0 4005670.0 5233400.0 6471500.0 5381330.0 True False 3944934.562714448 4424322.319810173 4159064.363741034 3311312.447625304 3560942.510968941 5055051.3943473445 4410602.21517187 5215246.556884737 5296438.733239164 5333655.602811393 0.7396305379438177 0.829510311366578 0.7797774497379946 0.6208335697340295 0.6676363785265685 0.9477648672484223 0.8269379471833581 0.9777996453568838 0.9930222585889099 1.0 22.34669324157765 -6.722932573311548 1.337282087741984 0.9842761757621319 0.7355991031675352 0.6682842986501404 0.07538387004964098 0.29139899944140357 1.056132028272788 0.049403847761958095 0.029751025704646925 1.8926374385628698e-07 6.722932573311548 -0.2486770725945967 FAPPLS(ph)PLSSDMLIMPK ddPTM_KYSE-520_SHP099_60min_R1 2 FAPPLSPLSSDMLIMPK 17 0 Q5H9M0 Q5H9M0 MUM1L1 PWWP domain-containing protein MUM1L1 1 FAPPLS(0.99)PLS(0.008)S(0.002)DMLIMPK;FAPPLS(0.997)PLS(0.003)S(0.001)DMLIMPK 176.29 7.319499999999999e-07 0.0 147125.0 175172.0 125760.0 108629.0 107378.0 170562.0 109342.0 137255.0 156443.0 138565.0 True False 138963.6829635838 166756.47418146738 133866.69082311454 118953.06749950023 115828.03770275383 169497.45929123863 120395.35643508396 136778.89444055787 128036.89480709803 137337.4219019387 1.011841354229048 1.2142100228190855 0.9747284386821945 0.866137326972941 0.8433829330614423 1.2341680580858925 0.8766391182226234 0.9959331735396952 0.9322797314377911 1.0 17.067365261147327 -4.867132134427525 8.789980723062037 0.963087382785647 1.1124195836533464 0.213585929419576 0.11339644607955487 0.3607123073949887 27.025797754340942 0.02940750333363818 0.06153574643656286 1.3579002415466762e-05 4.867132134427525 0.14933220086769938 FARS(ph)DDEQSSADKER ddPTM_KYSE-520_SHP099_60min_R1 1 FARSDDEQSSADKER 15 2 A6NGV6;P27540-3;P27540-4;P27540 A6NGV6 ARNT Aryl hydrocarbon receptor nuclear translocator 1 FARS(0.701)DDEQS(0.262)S(0.037)ADKER 80.238 0.006669400000000001 337410000.0 130620.0 148380.0 118460.0 87181.0 131190.0 121390.0 101900.0 117150.0 159930.0 126500.0 True False 123374.24821548564 141251.6020770792 126096.12114270138 95466.65602807666 141513.9066310071 120632.35998266572 112201.04644816309 116743.63399301546 130890.74350721476 125379.30841551078 0.9840080454632888 1.1265942033191567 1.0057171533026412 0.7614227358129725 1.128686291377727 0.962139299595484 0.8948928484780396 0.9311236077816251 1.0439580913418258 1.0 16.93593975152866 -4.999192650767325 24.999123283072766 0.9557942541143287 1.0580147898689158 0.13547695002350368 0.09588376797335221 49.26277151326123 1525169.5804628453 0.02455095152980496 0.05040892531088339 1.0018607193017079e-05 4.999192650767325 0.10222053575458712 FAS(ph)AENIPDLPYDYSSSLESVADETSPER ddPTM_KYSE-520_SHP099_60min_R1 1 FASAENIPDLPYDYSSSLESVADETSPER 29 0 P50747 P50747 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase 1 FAS(1)AENIPDLPYDYSSSLESVADETSPER 115.9 0.00021349 19944000.0 31882.0 40670.0 28102.0 25561.0 22640.0 32663.0 25906.0 34502.0 39459.0 36753.0 True False 30113.441904808686 38716.152153085415 29913.499884789777 27990.309754805134 24421.639196021017 32459.138101275326 28524.831298195455 34382.32061482734 32294.240280442606 36427.39701340134 0.8266701541625441 1.0628305980480037 0.8211813727394478 0.7683862161358311 0.6704195522682144 0.8910638904375702 0.7830598296030156 0.9438588379559034 0.8865371376538878 1.0 15.152736287887743 -7.8449415428642455 1.2334145389707738 0.9909726783831302 0.835353092736051 0.2046518798990723 0.09851371828034733 0.7622563089720219 2.5045561752587564 0.09936660296776774 0.03157626381095805 1.4290863041969337e-08 7.8449415428642455 -0.15561958564707923 FAS(ph)DDEHDEHDENGATGPVK ddPTM_KYSE-520_SHP099_60min_R1 13 FASDDEHDEHDENGATGPVK 20 0 P05455 P05455 SSB Lupus La protein 1 FAS(1)DDEHDEHDENGATGPVK;FAS(0.996)DDEHDEHDENGAT(0.004)GPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK;FAS(1)DDEHDEHDENGATGPVK 321.97 5.308e-54 88271670000.0 29320610.0 24630440.0 23178170.0 25507350.0 26652220.0 25736940.0 26525340.0 28779030.0 30402100.0 26500030.0 True False 27694137.314113073 23447156.691355854 24672271.924583226 27931560.874935552 28749598.083612002 25576306.21082682 29206780.229571324 28679202.26200607 24881845.014573198 26265260.350911353 1.0544017818255564 0.8927060450989318 0.9393499853020549 1.063441233848892 1.094586449915561 0.9737693770828879 1.1119927934983482 1.0919062624487161 0.9473290834411945 1.0 24.64665254929838 -5.261112416090579 24.999572221129405 1.0467221048179256 0.9552079447186348 0.2361754054653531 0.06344588667376112 36.37968957812897 2781486.706840543 0.01712825275960154 0.027505832391000636 5.481350631027308e-06 5.261112416090579 -0.09151416009929081 FAS(ph)DDEHDEHDENGATGPVKR ddPTM_KYSE-520_SHP099_60min_R1 5 FASDDEHDEHDENGATGPVKR 21 1 P05455 P05455 SSB Lupus La protein 1 FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR;FAS(1)DDEHDEHDENGATGPVKR 166.06 2.5958000000000005e-09 50404700000.0 13094570.0 12045090.0 12036900.0 10648380.0 11468360.0 10981840.0 9897390.0 10273650.0 14874560.0 9055970.0 True False 12368188.098721879 11466425.796351312 12812817.833720943 11660398.83364781 12370854.68595757 10913298.263053289 10897914.770417908 10238013.106037946 12173714.86114346 8975741.15123804 1.3779573062906247 1.2774906944335989 1.4274941331116315 1.2991015045080117 1.378254394541139 1.2158659746496812 1.214152078005808 1.1406315014583281 1.3562907681962642 1.0 23.097599640412376 -6.345303128480781 4.567236133753974 1.1929013021966377 1.3491257358492748 0.456020130104715 0.09099007878803114 0.22147025336299483 8.276235110989067 0.030664439984835982 0.02700231387214217 4.5154066840082316e-07 6.345303128480781 0.15622443365263705 FAS(ph)ENDLPEWK ddPTM_KYSE-520_SHP099_60min_R1 13 FASENDLPEWK 11 0 P43487-2;P43487;F6WQW2;C9JXG8;C9JGV6;C9JJ34;C9JIC6;C9JDM3 P43487-2 RANBP1 Ran-specific GTPase-activating protein 1 FAS(1)ENDLPEWK;FAS(1)ENDLPEWK;FAS(1)ENDLPEWK;FAS(1)ENDLPEWK;FAS(1)ENDLPEWK;FAS(1)ENDLPEWK;FAS(1)ENDLPEWK;FAS(1)ENDLPEWK;FAS(1)ENDLPEWK;FAS(1)ENDLPEWK;FAS(1)ENDLPEWK;FAS(1)ENDLPEWK;FAS(1)ENDLPEWK 261.98 2.3031000000000002e-20 10444985000.0 13202450.0 12572000.0 11454700.0 11271940.0 12487210.0 11525970.0 11621710.0 11791770.0 14028940.0 11615560.0 True False 12470083.780068422 11968022.249043282 12193088.290168025 12343221.78856766 13469882.384494074 11454032.145888513 12796545.863759404 11750867.1020898 11481638.136798013 11512655.175168926 1.0831631444121184 1.0395536100878375 1.0591030569965034 1.0721437931355873 1.1700065866253506 0.9949079488277514 1.11151994644638 1.020691310848488 0.9973058310269023 1.0 23.456717266255655 -7.445780250883189 5.614983063078222 1.0015432805599758 1.073996353791003 0.3629308814005663 0.042912112913568314 0.23836405843069533 12.9636473564312 0.02408769780674628 0.011057776673547908 3.582776765403682e-08 7.445780250883189 0.07245307323102712 FAS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 1 FASLPR 6 0 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 FAS(1)LPR 78.324 0.027897 2504000000.0 959340.0 835960.0 897000.0 825500.0 804890.0 699920.0 727910.0 728440.0 783240.0 784880.0 True False 906123.4978031225 795799.2267984583 954822.0552507457 903955.2718043738 868230.2638023577 695551.5396578583 801494.246517002 725913.2116591748 641023.3598736371 777926.5738274005 1.1647930901048835 1.022974729971139 1.2273935450655955 1.1620059041779636 1.1160825365955336 0.8941094996096395 1.0302954976504384 0.9331384684388402 0.8240152495624372 1.0 19.569274464385803 -6.195922853124197 5.601099622390316 0.9381570618687447 1.140409557200992 0.6718923604956035 0.0707682035018552 0.13795938754395493 8.544806381413805 0.023810545430664923 0.023684950160276524 6.36908649558272e-07 6.195922853124197 0.20225249533224732 FASENDLPEWK ddPTM_KYSE-520_SHP099_60min_R1 4 FASENDLPEWK 11 0 P43487-2;P43487;F6WQW2;C9JXG8;C9JGV6;C9JJ34;C9JIC6;C9JDM3 P43487-2 RANBP1 Ran-specific GTPase-activating protein 0 ;;; 256.38 6.4968e-15 1880280000.0 2068940.0 2337920.0 1727620.0 1356190.0 1999500.0 2375880.0 1924670.0 1865780.0 1779160.0 2059080.0 False True 1954171.7738703596 2225602.8139105365 1838985.1494897362 1485081.8898466094 2156849.274401238 2361051.251632062 2119234.4265690525 1859308.0446563242 1456109.392973777 2040838.1531399991 0.9575339283341523 1.0905337155159813 0.9010930860246339 0.7276823434340873 1.0568448414602336 1.156902740180248 1.0384137631435566 0.9110511981538684 0.713485971797142 1.0 20.96073034458033 -7.520968147309439 24.923111410522225 0.8419181797324209 0.9881976835916187 0.15147718348964068 0.1280814427129061 135.4084990976834 1766506.5840428101 0.08857362167875016 0.03460858809436773 3.0132270167893135e-08 7.520968147309439 0.14627950385919786 FATSLPHFPGCAGPTEDELSLPEGPSVPS(ph)SSLPQT(ph)PEQEK ddPTM_KYSE-520_SHP099_60min_R1 1 FATSLPHFPGCAGPTEDELSLPEGPSVPSSSLPQTPEQEK 40 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 2 FATSLPHFPGCAGPTEDELSLPEGPS(0.015)VPS(0.342)S(0.342)S(0.342)LPQT(0.959)PEQEK 84.40799999999999 0.00081178 153770000.0 51260.0 82817.0 57146.0 73697.0 50120.0 56384.0 52690.0 54325.0 71133.0 67067.0 True False 48416.50561572338 78838.34700914862 60829.72259683287 80701.14072218891 54064.15885620912 56032.086541417186 58016.41940484512 54136.559254550324 58217.04031700558 66472.83855733648 0.7283652491229403 1.18602347545526 0.915106439216732 1.2140468569366079 0.8133270675597193 0.8429320570248618 0.8727838417010395 0.8144162402189966 0.8758019302393741 1.0 16.02047734146603 -5.829753131098789 24.999991842829008 0.8593954221431392 1.0165725710823865 0.20173644505516397 0.1362732094875359 70.86745598800314 25933.40033519168 0.03925123074121468 0.04450672723482965 1.4799494065983092e-06 5.829753131098789 0.15717714893924728 FATSLPHFPGCAGPTEDELSLPEGPSVPSSS(ph)LPQT(ph)PEQEK ddPTM_KYSE-520_SHP099_60min_R1 2 FATSLPHFPGCAGPTEDELSLPEGPSVPSSSLPQTPEQEK 40 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 2 FATSLPHFPGCAGPTEDELSLPEGPSVPS(0.007)S(0.216)S(0.777)LPQT(1)PEQEK;FATSLPHFPGCAGPTEDELSLPEGPS(0.007)VPS(0.313)S(0.338)S(0.363)LPQT(0.979)PEQEK 192.85 6.7642e-16 358300000.0 235952.0 283411.0 250485.0 354249.0 263574.0 243269.0 225784.0 259610.0 303418.0 252391.0 True False 222863.27220134952 269795.51015141647 266631.66389017034 387916.71845115477 284315.77426908317 241750.66793494622 248608.45015949022 258709.47350342936 248324.93974533924 250155.0120972266 0.8909006872695809 1.0785133101652837 1.065865767208933 1.5507053614435875 1.1365583758864661 0.9664034548345811 0.9938175856451148 1.0341966420520006 0.9926842467134895 1.0 17.932462832845275 -6.2079932213397875 6.741347264137427 0.9994411474870284 1.159871549516034 0.17900795208584597 0.15598374479288699 0.4432729516351996 46.11086070593829 0.05547120304788006 0.05520426050543305 6.194507436623024e-07 6.2079932213397875 0.16043040202900571 FAVIEDDS(ph)DEGGDDEYCDGDEDEDDLKKPLK ddPTM_KYSE-520_SHP099_60min_R1 1 FAVIEDDSDEGGDDEYCDGDEDEDDLKKPLK 31 2 A0A3B3IRK8;Q9BYX4 A0A3B3IRK8 IFIH1 Interferon-induced helicase C domain-containing protein 1 1 FAVIEDDS(1)DEGGDDEYCDGDEDEDDLKKPLK 125.97 7.5168e-05 253770000.0 118660.0 115160.0 85255.0 115390.0 101620.0 103030.0 118910.0 113250.0 148030.0 101280.0 True False 112077.69325715442 109627.54074131581 90750.67371282302 126356.63090673153 109616.91586129225 102386.9515529621 130930.58324976527 112857.1621827488 121151.48353262666 100382.73799464777 1.116503648895592 1.0920955428328818 0.9040466072728728 1.258748599918331 1.0919896991366864 1.0199657191898988 1.3043137282900796 1.124268618661967 1.2068955873577212 1.0 16.61515167648797 -5.271086678973745 24.995519553946295 1.1482951442248701 1.0430032886528366 0.17662008806620277 0.10454882734784512 1127.6484204339497 2921661.1175780436 0.028855835857960983 0.043431443374602974 5.356897308263988e-06 5.271086678973745 -0.10529185557203347 FCDS(ph)PTSDLEMR ddPTM_KYSE-520_SHP099_60min_R1 2 FCDSPTSDLEMR 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 FCDS(0.892)PT(0.091)S(0.017)DLEMR;FCDS(0.659)PT(0.17)S(0.17)DLEMR 158.25 4.6927e-06 299600000.0 524520.0 458520.0 424240.0 426670.0 462050.0 484650.0 420300.0 452180.0 549830.0 426830.0 True False 495423.8299953026 436492.0109474487 451587.1892079997 467220.5885169867 498410.70629512036 481625.11957821064 462788.0257327088 450611.4931196055 449994.73208636127 423048.6182687149 1.171080127912428 1.031777417767607 1.0674593172200304 1.1044134606302256 1.1781404897026195 1.1384628120266989 1.0939357930694196 1.0651529721659154 1.0636950758234849 1.0 18.6904639470127 -7.882664514642775 1.1726280319852365 1.0032849087173716 1.11060851005952 0.40732171359142266 0.04230844617312521 0.5113680832404984 1.5512608367467087 0.0430437746501917 0.013825306416833818 1.310193635256628e-08 7.882664514642775 0.10732360134214836 FCFTPHTEEGCLSER ddPTM_KYSE-520_SHP099_60min_R1 1 FCFTPHTEEGCLSER 15 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 62.376999999999995 0.036005 0.0 155210.0 94613.0 100960.0 124060.0 120550.0 116110.0 125290.0 124050.0 165050.0 130160.0 False True 146600.1918965359 90067.64946299161 107468.0431417116 135850.6251000008 130036.59916432585 115385.31442118225 137955.53591256487 123619.69950348776 135081.08057191124 129006.8836629476 1.1363749571654935 0.6981615779380319 0.8330411532340408 1.0530494283927796 1.007981864782259 0.8944120743405134 1.0693656958104434 0.9582411108113055 1.0470842852450688 1.0 16.977088522732153 -5.257380621333117 24.906987527636616 1.0008501723160244 0.8700894607849399 0.17619848733779697 0.1116210839473506 497.47567531278963 3052799.1666346653 0.02945168662135141 0.04865473315443952 5.528653584341753e-06 5.257380621333117 -0.13076071153108448 FCKLYMT(ph)TNEQCLKTTLEK ddPTM_KYSE-520_SHP099_60min_R1 1 FCKLYMTTNEQCLKTTLEK 19 2 A8K855-2;A8K855 A8K855-2 EFCAB7 EF-hand calcium-binding domain-containing protein 7 1 FCKLY(0.009)MT(0.248)T(0.248)NEQCLKT(0.248)T(0.248)LEK 46.178000000000004 0.064376 1468900000.0 672390.0 649580.0 555920.0 629100.0 614310.0 594130.0 602230.0 653090.0 734540.0 515530.0 True False 635091.1863237652 618373.2017605416 591755.4927034496 688889.474854188 662652.7020542269 590421.8142886673 663109.2855984038 650824.5832223519 601166.0522465415 510962.8052762705 1.242930365509443 1.210211771532364 1.158118529554212 1.3482184373121153 1.2968707217268776 1.15550840137852 1.2977642966396934 1.2737220331927293 1.1765358379099617 1.0 18.96285875073377 -10.36458905407899 4.144447548898311 0.999437699475217 1.2417663345791135 0.5754872261093891 0.06181822669840144 0.00032493668613368 4.981790294024007e-05 0.060554664166544085 0.014653013981763297 4.3192758979991895e-11 10.36458905407899 0.24232863510389646 FCLSS(ph)PTEALK ddPTM_KYSE-520_SHP099_60min_R1 2 FCLSSPTEALK 11 0 E7EWD6;Q76L83;Q76L83-2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 FCLS(0.261)S(0.702)PT(0.037)EALK;FCLS(0.018)S(0.956)PT(0.026)EALK 136.5 0.00011023 721250000.0 1419850.0 1431020.0 1271000.0 1054180.0 1222460.0 1673710.0 1682880.0 2026960.0 2448700.0 2171360.0 True False 1341088.0900991987 1362271.651195189 1352930.693671904 1154368.9502492268 1318660.6471540574 1663263.755058797 1853001.9337260532 2019928.9488560192 2004077.8067036618 2152123.439692519 0.623146454039274 0.6329895516540729 0.6286492069735562 0.536386031097805 0.6127253775659164 0.7728477485921685 0.8610109901459916 0.9385748566283972 0.931209506732565 1.0 21.03732939848493 -6.631168367587949 1.551770862188719 0.9517703736792676 0.6023563611993856 0.9542301005323073 0.03400125794554162 0.08098554882868327 0.39790564964359476 0.01941132693639854 0.01307885529959816 2.3379306923424092e-07 6.631168367587949 -0.349414012479882 FCSNSGRLS(ph)GPAELR ddPTM_KYSE-520_SHP099_60min_R1 2 FCSNSGRLSGPAELR 15 1 Q96PC5;Q96PC5-12;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-6;G3V599;Q96PC5-14;Q96PC5-7;Q96PC5-5;Q96PC5-8 Q96PC5 MIA2 Melanoma inhibitory activity protein 2 1 FCSNSGRLS(1)GPAELR;FCSNSGRLS(1)GPAELR 154.19 1.8812999999999999e-06 1840470000.0 932690.0 1249960.0 1144210.0 1550930.0 1143680.0 1060570.0 1143490.0 1203510.0 1496580.0 1065810.0 True False 880951.8264285795 1189910.045371788 1217967.6074007312 1698329.9208958943 1233681.1093509432 1053950.5892315342 1259085.12858695 1199335.3047113465 1224838.7977116683 1056367.7525876334 0.8339442625644691 1.12641647992097 1.1529768912551994 1.6077070856581315 1.1678519211978693 0.9977118164103568 1.1919003827055008 1.1353388076959996 1.1594814350507723 1.0 20.010680735907744 -9.142854349568966 0.6693492066017998 0.9907587697399 1.1668682559939838 0.05512015112243129 0.18351363311078486 21.367043925627204 9.530881605339664 0.7313654309128063 0.07361640290552803 7.196903018786312e-10 9.142854349568966 0.17610948625408385 FDALKDDDS(ph)GDHDQNEENSTQK ddPTM_KYSE-520_SHP099_60min_R1 1 FDALKDDDSGDHDQNEENSTQK 22 1 B4E1E4;B9A023;B8ZZL3;B9A044;B8ZZ50;O60573-2;O60573 B4E1E4 EIF4E2 Eukaryotic translation initiation factor 4E type 2 1 FDALKDDDS(1)GDHDQNEENSTQK 113.99 0.00010826 447080000.0 356170.0 356490.0 352120.0 361120.0 375100.0 357210.0 303140.0 357170.0 373170.0 333860.0 True False 336412.54009270796 339363.68529760046 374818.21861192025 395440.7362253133 404618.2359729452 354980.51988967875 333784.3495612968 355931.0606341045 305411.7348501677 330902.2601391493 1.0166522886584137 1.025570768706424 1.1327158008963238 1.19503788236147 1.222772657408859 1.0727654738302608 1.0087097906824074 1.0756380463658066 0.922966602650999 1.0 18.336045620062503 -6.60985545330958 4.189567566636167 1.0086599944308983 1.120846673667808 0.3825280366460666 0.06938523317471768 0.2742305283695007 9.025901384232666 0.030514802757717428 0.023286321184377744 2.4555260550193124e-07 6.60985545330958 0.11218667923690973 FDASFFGVHPK ddPTM_KYSE-520_SHP099_60min_R1 2 FDASFFGVHPK 11 0 P49327;A0A0U1RQF0;A0A0U1RRG3 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 ; 121.9 0.00036472 796380000.0 2007770.0 1892810.0 1162090.0 1519170.0 2103640.0 1775650.0 1411920.0 1383760.0 1507480.0 1405270.0 False True 1896394.9957097352 1801876.566434267 1237000.1808097411 1663551.4600448834 2269184.4999256916 1764567.5097060779 1554650.6526112908 1378960.059532011 1233759.632478308 1392820.401083516 1.3615502718329469 1.2936890966218861 0.8881261215354416 1.1943761440820064 1.629201078732352 1.2669024005775396 1.1161888865225427 0.9900487230509241 0.8857995126424987 1.0 20.40957780919382 -7.064007315145926 2.52180582075719 0.9491153137056199 1.2670692214952046 0.40018078434197 0.17260515034254995 0.3435536996921972 4.274205706598471 0.10592311587576873 0.05578086928922288 8.62964012097958e-08 7.064007315145926 0.31795390778958477 FDCHYCR ddPTM_KYSE-520_SHP099_60min_R1 4 FDCHYCR 7 0 Q13642;A0A0D9SFZ9;A0A494C0D6;Q5JXI8;Q5JXI2;Q5JXI3;Q5JXH7;Q5JXH8;A0A494C1G1;Q5JXH9;A0A0D9SFB0;A0A0D9SFI6;Q5JXI0;A0A0D9SGB2;A0A0D9SGD1;A0A494C0J3;A0A0D9SEY7;Q13642-5;Q13642-4;Q13642-3;Q13642-1;A0A0D9SGC5 Q13642 FHL1 Four and a half LIM domains protein 1 0 ;;; 129.4 0.003539 4552580000.0 9823600.0 8950900.0 6441300.0 5946200.0 9956100.0 9142100.0 7306600.0 7811100.0 7374800.0 7279900.0 False True 9278665.325138908 8520885.328425197 6856516.5044443915 6511325.060209782 10739588.427539958 9085040.762810202 8045222.433544146 7784005.117224441 6035722.223579104 7215405.749676491 1.2859519820565772 1.1809294756302844 0.9502606980559353 0.9024198064678098 1.48842474008083 1.2591170999936543 1.1150062397952964 1.078803519479614 0.836504894246553 1.0 22.782649094544727 -7.533122184744819 3.172609475695611 0.9200869256631955 1.165346787532048 0.2702970578719288 0.16161249037897626 0.37379173691099926 7.561340253903512 0.13238953518969662 0.04650674507204892 2.9300687814650952e-08 7.533122184744819 0.2452598618688525 FDDDKVSIVTPEDILR ddPTM_KYSE-520_SHP099_60min_R1 6 FDDDKVSIVTPEDILR 16 1 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 0 ;;;;; 208.43 1.1037e-17 1533964000.0 1146788.0 1096437.0 720608.0 721903.0 1082290.0 1166992.0 832212.0 1027799.0 919489.0 965316.0 False True 1083173.3835747994 1043762.5207345107 767059.5446935652 790512.4440719495 1167460.0656122628 1159708.3700542965 916340.1105664251 1024233.8051590894 752532.9760314217 956764.0512444827 1.1321217411606272 1.0909299104380723 0.8017227901652817 0.8262355207051453 1.2202173190910794 1.2121153261829183 0.9577493106837811 1.0705186966701428 0.7865397691861296 1.0 19.867803658218616 -7.74227011969653 24.99329761487444 0.893269777178033 1.0347934139472876 0.14086330183417206 0.14361833938610188 457.0379874264386 595900.5254396113 0.104655259155287 0.03942021549120199 1.810213837212594e-08 7.74227011969653 0.1415236367692546 FDDKPDYSYLR ddPTM_KYSE-520_SHP099_60min_R1 1 FDDKPDYSYLR 11 1 P49674;H0Y645;B0QY35;B0QY34;A0A669KBC0;P48730-2;H7BYT1;P48730 P49674;P48730-2 CSNK1E;CSNK1D Casein kinase I isoform epsilon;Casein kinase I isoform delta 0 123.95 0.00021829 294390000.0 253850.0 216650.0 168650.0 154400.0 222880.0 232430.0 194450.0 187150.0 208460.0 180550.0 False True 239768.43446257085 206241.80880172006 179521.44884954081 169074.1295779475 240419.3879862709 230979.31815446928 214106.90364912007 186500.82033113833 170608.91884895889 178950.46746577433 1.339859223940996 1.1525077957181946 1.0031907230634962 0.9448096558355413 1.3434968423999951 1.290744424563439 1.1964590351800544 1.0421924176689175 0.9533862708773821 1.0 17.449200786895627 -7.415961824775453 3.735826135265632 0.980879821802107 1.1745597854385006 0.31998598082582397 0.12409274751321665 0.33783744851040187 8.382029331056946 0.08686488120253556 0.03680688334081696 3.8374097549503795e-08 7.415961824775453 0.19367996363639362 FDDMSS(ph)PGLELPSCELSR ddPTM_KYSE-520_SHP099_60min_R1 3 FDDMSSPGLELPSCELSR 18 0 Q6IN85-2;Q6IN85;G3V231;H0YIY8;G3V5Z3;Q6IN85-5 Q6IN85-2 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A 1 FDDMS(0.028)S(0.972)PGLELPSCELSR;FDDMS(0.039)S(0.961)PGLELPSCELSR;FDDMS(0.001)S(0.999)PGLELPSCELSR 244.27 1.0182999999999999e-23 187940000.0 359239.0 347728.0 295527.0 225367.0 242476.0 337318.0 326761.0 355926.0 346586.0 352976.0 True False 339311.29654480773 331022.6249296307 314577.1432799183 246785.8119209407 261557.4817002824 335212.6732402413 359793.19076004176 354691.3757797533 283654.7191220625 349848.90725117293 0.9698795380292563 0.9461873913814287 0.8991800081686938 0.7054068393695498 0.7476298375644147 0.9581641282634518 1.0284245092745976 1.0138415996969337 0.8107920683554214 1.0 18.41637245985602 -6.476684632549613 21.76283480706171 0.9685431830231828 0.8530707167414725 0.24848111393096517 0.09427414681173628 149.81481208714226 70579.8698019658 0.036406074750803624 0.03210390590428423 3.336686217478309e-07 6.476684632549613 -0.11547246628171026 FDDTNPEKEKEDFEK ddPTM_KYSE-520_SHP099_60min_R1 4 FDDTNPEKEKEDFEK 15 2 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 0 ;;; 143.14 6.546900000000001e-06 4339480000.0 4349590.0 4410460.0 2868040.0 2092120.0 3537690.0 3702490.0 2489260.0 2846230.0 3562500.0 3115000.0 False True 4108309.5720073 4198574.881364573 3052918.4474262516 2290954.4557811855 3816086.0762973363 3679381.3865410667 2740898.693636456 2836357.092445076 2915639.8033167804 3087403.5234333314 1.330668162041441 1.3599048033395935 0.9888303955912019 0.742032726980094 1.2360179184007918 1.1917397122257052 0.887768208085885 0.9186868742349945 0.9443662874603634 1.0 21.557962624745716 -4.762813493556472 24.881094354438222 0.9894489604458836 1.3452865921090926 0.5294207712171924 0.13448062941315653 25.792917553011563 467076.569479145 0.03732318501082308 0.0851676617842486 1.7265792069868724e-05 4.762813493556472 0.35583763166320903 FDEILEASDGIMVAR ddPTM_KYSE-520_SHP099_60min_R1 3 FDEILEASDGIMVAR 15 0 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;; 180.18 5.5594e-08 207414000.0 219872.0 299384.0 278832.0 291162.0 307169.0 287308.0 267214.0 279577.0 328357.0 289662.0 False True 207675.26185603472 285001.1432554545 296805.9568669737 318833.9489389529 331341.45274746383 285514.8042005085 294226.5988773255 278607.2126407622 268735.6460063682 287095.82003362617 0.723365675723564 0.9927039105692088 1.0338219373316206 1.1105489062906224 1.1541145137837792 0.9944930726162001 1.0248376268343584 0.9704328422759003 0.9360486194988575 1.0 18.131172800242588 -4.255468751448565 3.2197657815562617 1.032631636474353 0.6766870739938607 0.6920774014433355 0.060520994448203316 0.21435210213317382 3.4954230450795647 0.017175246178901257 0.19287370126751563 5.55304571205828e-05 4.255468751448565 -0.35594456248049233 FDFDS(ph)DEDFNAFFNSSR ddPTM_KYSE-520_SHP099_60min_R1 6 FDFDSDEDFNAFFNSSR 17 0 Q9HAV4 Q9HAV4 XPO5 Exportin-5 1 FDFDS(1)DEDFNAFFNSSR;FDFDS(1)DEDFNAFFNSSR;FDFDS(1)DEDFNAFFNSSR;FDFDS(1)DEDFNAFFNSSR;FDFDS(1)DEDFNAFFNSSR;FDFDS(1)DEDFNAFFNSSR 279.19 1.9723999999999998e-30 90739600.0 167692.0 176747.0 153038.0 149374.0 162536.0 166633.0 140117.0 156845.0 202558.0 161507.0 True False 158389.79047428563 168255.8088173444 162903.07434945766 163570.46004906928 175326.65849666402 165592.98163762694 154281.39377014028 156300.9413028981 165778.57327164646 160076.1736305448 0.989465120773368 1.05109839272944 1.017659721961104 1.021828897700849 1.0952701736944144 1.0344636424144853 0.9637998602229283 0.9764160259330041 1.0356230381559643 1.0 17.28839906184674 -10.027069312774074 6.220511188202643 0.9999999812924312 1.0211003333944948 0.02828298925257755 0.0361714287872315 1.008280384893043e-08 1.6252839989161103e-09 0.03769314109509239 0.009141921361559445 9.395733440446949e-11 10.027069312774074 0.021100352102063624 FDFLCQYHKPASK ddPTM_KYSE-520_SHP099_60min_R1 3 FDFLCQYHKPASK 13 1 J3KQ32;Q9NTK5;Q9NTK5-3;C9JTK6 J3KQ32 OLA1 Obg-like ATPase 1 0 ;; 135.37 1.4840999999999999e-05 2312490000.0 3593480.0 3124500.0 2501580.0 2386030.0 4487360.0 3481520.0 2710290.0 2571640.0 2776460.0 2316030.0 False True 3394142.5009752205 2974394.330029888 2662835.849469518 2612797.573813919 4840489.702414173 3459790.5422757245 2984272.563081374 2562719.5810652906 2272324.852860885 2295511.7760440763 1.4785994724123992 1.2957434420814649 1.160018379020674 1.1382200697382745 2.1086756133989137 1.5071979060974736 1.3000467234475528 1.1164044583912793 0.9898990179770937 1.0 21.130384402462152 -7.234532955362779 2.3880389482780786 1.0108605750091038 1.4410478541790126 0.346434344348597 0.2548224544575201 0.4036623859655409 4.427455029789522 0.18115330996052303 0.080092503219651 5.827295541274368e-08 7.234532955362779 0.43018727916990884 FDGSENRPFS(ph)PSPLNNISSTVTVK ddPTM_KYSE-520_SHP099_60min_R1 1 FDGSENRPFSPSPLNNISSTVTVK 24 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 FDGS(0.006)ENRPFS(0.969)PS(0.025)PLNNISSTVTVK 152.53 2.8329e-07 721280000.0 242290.0 322060.0 231480.0 219260.0 192810.0 248700.0 276850.0 250380.0 277140.0 262330.0 True False 228849.69070685975 306587.75417808467 246401.57118109538 240098.4044770773 207983.05006116658 247147.7710494189 304836.69979562325 249511.4902191315 226818.36213086642 260005.9602896515 0.8801709408965738 1.1791566387037442 0.9476766259765715 0.923434232852213 0.7999164704896363 0.9505465596792153 1.1724219685426807 0.9596375788507734 0.8723583177792791 1.0 17.98818516992809 FDIYDPFHPTDEAYS(ph)PPPAPEQK ddPTM_KYSE-520_SHP099_60min_R1 12 FDIYDPFHPTDEAYSPPPAPEQK 23 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 FDIYDPFHPTDEAY(0.105)S(0.895)PPPAPEQK;FDIYDPFHPTDEAY(0.006)S(0.994)PPPAPEQK;FDIYDPFHPT(0.001)DEAY(0.014)S(0.985)PPPAPEQK;FDIYDPFHPTDEAYS(1)PPPAPEQK;FDIYDPFHPTDEAYS(1)PPPAPEQK;FDIYDPFHPTDEAYS(1)PPPAPEQK;FDIYDPFHPTDEAYS(1)PPPAPEQK;FDIYDPFHPTDEAYS(1)PPPAPEQK;FDIYDPFHPTDEAYS(1)PPPAPEQK;FDIYDPFHPTDEAYS(1)PPPAPEQK;FDIYDPFHPTDEAYS(1)PPPAPEQK;FDIYDPFHPTDEAYS(1)PPPAPEQK 260.46 1.6464e-37 60075750000.0 15658070.0 16479540.0 15007260.0 16886310.0 14118520.0 15214960.0 14464050.0 14809970.0 18597810.0 14617620.0 True False 14789485.643511299 15687838.162106147 15974651.992064988 18491179.82534578 15229567.200609835 15119997.79093715 15926217.329524593 14758597.67074299 15220916.51663798 14488119.25913628 1.0208009320592095 1.0828070836187602 1.1026035682299684 1.2762995316790446 1.0511762726556793 1.0436135650527865 1.0992605075004087 1.0186689802015638 1.0505791845300827 1.0 23.788366991223544 -5.950046255454294 24.99999525969577 1.0471698808588965 1.1225262149628255 0.25211787229396176 0.06460943485829074 167.39925496950207 83776.26605670387 0.020835278532204404 0.02362497797896366 1.1218989577120722e-06 5.950046255454294 0.07535633410392895 FDKDHDVMLFLK ddPTM_KYSE-520_SHP099_60min_R1 2 FDKDHDVMLFLK 12 1 H3BND8;A0A669KBL1;Q93009-3;Q93009 H3BND8 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 0 ; 142.91 3.0864e-05 1080100000.0 4142600.0 3895000.0 2707200.0 2557300.0 4114700.0 4216800.0 3028700.0 3052700.0 3399900.0 2957600.0 False True 3912801.7199316323 3707878.353485805 2881710.443673152 2800345.023119721 4438503.480559528 4190481.3870574613 3334870.55326351 3042110.896205533 2782563.864504339 2931397.964977984 1.3347903514564319 1.2648839897498028 0.9830498888590158 0.9552933639771948 1.5141251831335234 1.4295163731168565 1.1376382849090763 1.0377679634598438 0.9492276032624036 1.0 21.483157410134233 -7.189808447657133 3.1717876052270304 0.9881332195940267 1.23656256383761 0.31236899209601166 0.16548882623115038 0.3728240271210114 7.3076104006626545 0.10293242649125706 0.052027007170442854 6.459390676963456e-08 7.189808447657133 0.24842934424358343 FDLIWNRAQS(ph)CPTFLCALPRR ddPTM_KYSE-520_SHP099_60min_R1 1 FDLIWNRAQSCPTFLCALPRR 21 2 H0YD21;I3L448;Q5TC12-2;Q5TC12-3;Q5TC12 H0YD21 ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1 1 FDLIWNRAQS(0.5)CPT(0.5)FLCALPRR 45.972 0.06360299999999999 1118200000.0 324020.0 303830.0 242360.0 277680.0 302560.0 274600.0 242660.0 273670.0 313130.0 252010.0 True False 306045.9646821434 289233.5507418726 257982.9133897108 304070.6237124635 326369.7506690865 272886.1195423023 267190.44093337824 272720.7026450579 256273.48536493527 249777.38746081322 1.2252749049597533 1.1579653133622816 1.0328513562108776 1.2173664990397426 1.3066425026976858 1.0925173103794854 1.069714290991601 1.091855053083395 1.026007550043501 1.0 17.9302833490016 -6.505407485965157 23.755457840429223 1.0583440569249976 1.181382247273129 0.48504994948881197 0.0687192036469662 407.43634383947966 553988.3083316539 0.02627818498740197 0.022639331115167558 3.123147632765325e-07 6.505407485965157 0.12303819034813146 FDLLWLIQDRPDR ddPTM_KYSE-520_SHP099_60min_R1 2 FDLLWLIQDRPDR 13 1 P33993;P33993-3 P33993 MCM7 DNA replication licensing factor MCM7 0 ; 107.34 0.0018158000000000002 32972000.0 38395.0 30880.2 25593.5 21713.6 36839.0 29833.3 25111.5 23057.6 25656.0 16715.1 False True 36265.15281146505 29396.66883987482 27243.297961047883 23777.25401556812 39738.019714762304 29647.099308599252 27650.01548462267 22977.618567284295 20997.517135128506 16567.01721815102 2.1889971099765937 1.7744092646724288 1.6444298694396118 1.43521635201281 2.3986224672492558 1.7895254720999227 1.6689797034996128 1.3869496400420074 1.267428943824805 1.0 14.01602625779115 -7.4757037246703995 1.258232982590683 1.0471087642794237 1.8609447179843557 0.5845284833288371 0.2554143996050407 0.3485331169346296 0.9792314486599778 0.2395739222838486 0.08301537328222504 3.344231053849668e-08 7.4757037246703995 0.813835953704932 FDLMYAK ddPTM_KYSE-520_SHP099_60min_R1 2 FDLMYAK 7 0 Q9BQE3;F5H5D3;Q9NY65;C9J2C0;Q9NY65-2;A6NHL2-2;A6NHL2;V9GZ17;P68363;P68366-2;P68366;P68363-2;Q71U36-2;Q71U36;P0DPH8;P0DPH7;Q6PEY2 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA8;TUBAL3;TUBA1B;TUBA4A;TUBA1A;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain 0 ; 123.96 0.017712000000000002 6317800000.0 4157800.0 3878900.0 2206080.0 2299490.0 3499500.0 3733700.0 2981400.0 2966200.0 2409350.0 2740300.0 False True 3927158.545631187 3692551.821652402 2348287.4466528003 2518032.8382331235 3774890.740568712 3710396.5933543066 3282789.007659994 2955910.944516283 1971872.774770885 2716023.0739211407 1.4459223794301284 1.359543612536929 0.8646051166504127 0.9271028889301086 1.3898595990640377 1.3661137966687382 1.2086749332805224 1.0883232078911667 0.7260147359219887 1.0 21.37306430534651 -7.5653539227730375 4.7802105351074 0.8657110006874162 1.211755592300649 0.35245454307431756 0.19293165090705003 0.24603995253123365 12.801936182102242 0.14953041666177508 0.05440804540777918 2.7204833810802192e-08 7.5653539227730375 0.34604459161323287 FDMLMS(ph)PEGAR ddPTM_KYSE-520_SHP099_60min_R1 1 FDMLMSPEGAR 11 0 A0A0A0MS58;Q8TCA0-3;Q8TCA0-2;Q8TCA0 A0A0A0MS58 LRRC20 Leucine-rich repeat-containing protein 20 1 FDMLMS(1)PEGAR 89.663 0.003046 32505000.0 77503.0 61300.0 57722.0 59462.0 58817.0 69368.0 56197.0 61521.0 63349.0 55795.0 True False 73203.75409159991 58355.05598682415 61442.85247846545 65113.25060209779 63445.56327704811 68935.04858124684 61877.94118986679 61307.59801010931 51846.418498333886 55300.69970785317 1.3237401059720109 1.0552317835959901 1.1110682650140147 1.1774399048490005 1.1472831919346997 1.2465493012823032 1.1189359540975137 1.1086224647064113 0.937536392346429 1.0 15.755010114234812 -7.592101816870896 2.8259151282197887 0.9682356775588359 1.1638343689627715 0.5379145177716935 0.07245102945027695 0.2110492903675922 3.206898901857704 0.058682162841516325 0.018866993663221036 2.557986117198117e-08 7.592101816870896 0.1955986914039356 FDPETNSDDACTYHPGVPVFHDALK ddPTM_KYSE-520_SHP099_60min_R1 1 FDPETNSDDACTYHPGVPVFHDALK 25 0 Q9UHD1;E9PPQ5;Q9UHD1-2;E9PIZ4;E9PSD5;E9PL00 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 0 178.53 9.775600000000001e-11 604700000.0 618450.0 575600.0 360920.0 382940.0 562840.0 596100.0 429560.0 482930.0 470750.0 594530.0 False True 584143.3456504899 547947.312006786 384185.48069241777 419334.50246489095 607132.3058784667 592379.5187879315 472984.1169015997 481254.82854670985 385273.6666417886 589262.9267373407 0.9913118900671434 0.9298859424954612 0.6519763305314223 0.7116254619761714 1.030324967565949 1.0052889667908464 0.802670752630648 0.8167064424217975 0.6538230205232668 1.0 19.168551976847848 -10.185264026319519 5.056644502280257 1.0000117640682336 0.8449800055711022 0.10724047681716375 0.13521762813933288 1.913093168992445e-05 3.0821736594906592e-06 0.1396691911822235 0.033872184448384225 6.527336071281932e-11 10.185264026319519 -0.15503175849713136 FDPFGPIGT(ph)SPPGPNPDHLPPPGYDDMYL ddPTM_KYSE-520_SHP099_60min_R1 11 FDPFGPIGTSPPGPNPDHLPPPGYDDMYL 29 0 Q92530 Q92530 PSMF1 Proteasome inhibitor PI31 subunit 1 FDPFGPIGT(0.5)S(0.5)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.5)S(0.5)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.554)S(0.446)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.5)S(0.5)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.529)S(0.471)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.536)S(0.464)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.559)S(0.441)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.542)S(0.458)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.541)S(0.459)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.671)S(0.329)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.576)S(0.424)PPGPNPDHLPPPGYDDMYL 258.11 1.2366999999999998e-40 1728905000.0 666129.0 914270.0 771456.0 576905.0 609561.0 794309.0 619060.0 722556.0 919950.0 864445.0 True False 629177.4964747594 870347.0968527523 821185.2881332422 631733.8777471875 657529.9827723402 789351.422897037 681640.6262433756 720049.6218818382 752910.2700522869 856786.6898280331 0.7343455540853961 1.0158270514536598 0.958447765216875 0.7373292387093265 0.767437205291219 0.9212928168334045 0.7955779826367152 0.8404071053278855 0.8787604651087713 1.0 19.708576542447197 -9.633830341370079 7.822389268337998 0.9999999980107827 0.8524880802970477 0.19934021807632862 0.09009382892685212 0.0 0.0 0.0891202582384364 0.021614837535258582 2.32364435871823e-10 9.633830341370079 -0.14751191771373495 FDPFGPIGT(ph)SPPGPRPDR ddPTM_KYSE-520_SHP099_60min_R1 3 FDPFGPIGTSPPGPRPDR 18 1 Q5QPM7 Q5QPM7 PSMF1 1 FDPFGPIGT(0.709)S(0.291)PPGPRPDR;FDPFGPIGT(0.594)S(0.406)PPGPRPDR;FDPFGPIGT(0.632)S(0.368)PPGPRPDR 125.88 0.00011533 3775530000.0 811850.0 964960.0 836070.0 763180.0 860210.0 853470.0 774920.0 755240.0 959210.0 790910.0 True False 766815.062117148 918601.8731655108 889964.4099592986 835712.3977415671 927903.6330746138 848143.1771513782 853256.4760903894 752620.248714341 785041.6437163468 783903.152718669 0.9782012732794128 1.1718308186154 1.1352989293036984 1.066091384941134 1.183696774093246 1.081948929800725 1.0884718005421905 0.9600934070798985 1.0014523362914531 1.0 19.580315902089716 -7.164304876785688 4.431792379605437 0.985826844955568 1.1077088982076848 0.46467200420568444 0.05574883060724227 0.18751040198792707 6.251300510382501 0.026802281937851866 0.014845118843366464 6.85007179335592e-08 7.164304876785688 0.12188205325211676 FDPFGPIGT(ph)SPPGPRPDRR ddPTM_KYSE-520_SHP099_60min_R1 1 FDPFGPIGTSPPGPRPDRR 19 2 Q5QPM7 Q5QPM7 PSMF1 1 FDPFGPIGT(0.538)S(0.462)PPGPRPDRR 51.833999999999996 0.042431 0.0 37161.0 45621.0 42738.0 28098.0 37306.0 35564.0 23926.0 26896.0 39184.0 26782.0 True False 35099.60525138306 43429.29868148292 45492.95986321776 30768.425472028244 40241.76995789576 35342.031884204036 26344.673575257635 26802.704053573594 32069.173348256754 26544.73231608072 1.322281378973252 1.6360797375671248 1.7138225136916623 1.1591160575911637 1.5159983336323726 1.3314141375912063 0.9924633355333596 1.0097183778092422 1.2081181669641228 1.0 14.69613797257598 -6.601738332967857 3.750348317403947 1.0542626620191065 1.47259184627627 0.6147070745782413 0.1555814037285461 0.16097396224559968 4.466129933241014 0.06422684213388007 0.048980533948936124 2.501852300227006e-07 6.601738332967857 0.4183291842571635 FDPFGPIGTS(ph)PPGPNPDHLPPPGYDDMYL ddPTM_KYSE-520_SHP099_60min_R1 10 FDPFGPIGTSPPGPNPDHLPPPGYDDMYL 29 0 Q92530 Q92530 PSMF1 Proteasome inhibitor PI31 subunit 1 FDPFGPIGT(0.173)S(0.827)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.214)S(0.786)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.155)S(0.845)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.13)S(0.87)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.188)S(0.812)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.254)S(0.746)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.174)S(0.826)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.162)S(0.838)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.306)S(0.694)PPGPNPDHLPPPGYDDMYL;FDPFGPIGT(0.198)S(0.802)PPGPNPDHLPPPGYDDMYL 215.86 2.7627e-22 5620716000.0 1196515.0 1782313.0 1220067.0 1060998.0 1173623.0 1682215.0 1236125.0 1502114.0 1650193.0 1614299.0 True False 1130141.9277564823 1696688.0081736436 1298714.4709962222 1161834.9309193185 1265980.4530985786 1671715.6721990278 1361084.5784174253 1496903.5171300415 1350559.5491802737 1599997.566765616 0.7063397790291996 1.0604316177826987 0.8116977787794794 0.7261479361296529 0.7912389864803041 1.0448238840627675 0.8506791551994972 0.9355661209885597 0.8441010019224094 1.0 20.609638280425656 -6.218541399932408 24.9998590392876 0.9257349123593455 0.8269914145033517 0.2253557861300053 0.1062187884278512 885.5710208677966 516088.465357884 0.03520046176641224 0.03520029513524732 6.045867152401454e-07 6.218541399932408 -0.09874349785599379 FDPFGPIGTS(ph)PPGPRPDR ddPTM_KYSE-520_SHP099_60min_R1 4 FDPFGPIGTSPPGPRPDR 18 1 Q5QPM7 Q5QPM7 PSMF1 1 FDPFGPIGT(0.168)S(0.832)PPGPRPDR;FDPFGPIGT(0.194)S(0.806)PPGPRPDR;FDPFGPIGT(0.136)S(0.864)PPGPRPDR;FDPFGPIGT(0.026)S(0.974)PPGPRPDR 152.81 1.5172999999999999e-06 4139870000.0 990830.0 1079650.0 981775.0 820448.0 936620.0 955842.0 882787.0 918722.0 1075480.0 928046.0 True False 935866.6847293631 1027781.9934123122 1045061.7873955398 898423.131243314 1010326.6653611837 949876.2355264137 972027.7251308599 915535.1678133267 880199.9426445282 919824.2344488619 1.0174407780091959 1.1173678132411202 1.1361537870566298 0.9767334862422157 1.098391005066907 1.032671460429131 1.056753767433924 0.9953370801997785 0.9569218875516194 1.0 19.810998683090304 -7.260875974526221 2.1099711506316994 0.9756489664218931 1.0666021139824808 0.3799485535646385 0.045893658991752906 0.3501198815905282 2.936006676237105 0.03229158442270364 0.013372483541672425 5.4843356378137826e-08 7.260875974526221 0.0909531475605877 FDPYEHEALFHTPVEGK ddPTM_KYSE-520_SHP099_60min_R1 4 FDPYEHEALFHTPVEGK 17 0 Q9HAV7 Q9HAV7 GRPEL1 GrpE protein homolog 1, mitochondrial 0 ;;; 223.96 2.7829000000000004e-18 2403880000.0 5010150.0 4258720.0 2703670.0 2732170.0 4870980.0 4803290.0 3908070.0 3578020.0 3737890.0 3614920.0 False True 4732226.992013593 4054124.698730957 2877952.894224953 2991834.6153431353 5254298.413914953 4773310.885420046 4303135.85468767 3565608.6837361427 3059183.4005388804 3582894.621165201 1.3207831913500752 1.1315221705885692 0.8032479875975274 0.8350328244848446 1.466495381381379 1.332249867808757 1.2010221649466872 0.9951754267828741 0.8538301356862114 1.0 21.772694181458345 -7.430772724513599 4.570430450138997 0.9254244427505878 1.1468646239191735 0.1872534682217074 0.19909055593030103 0.4340799618239538 15.288395569130596 0.13320615131078642 0.05911702948338818 3.708747576101643e-08 7.430772724513599 0.22144018116858577 FDQLFDDES(ph)DPFEVLK ddPTM_KYSE-520_SHP099_60min_R1 11 FDQLFDDESDPFEVLK 16 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 FDQLFDDES(1)DPFEVLK;FDQLFDDES(1)DPFEVLK;FDQLFDDES(1)DPFEVLK;FDQLFDDES(1)DPFEVLK;FDQLFDDES(1)DPFEVLK;FDQLFDDES(1)DPFEVLK;FDQLFDDES(1)DPFEVLK;FDQLFDDES(1)DPFEVLK;FDQLFDDES(1)DPFEVLK;FDQLFDDES(1)DPFEVLK;FDQLFDDES(1)DPFEVLK 288.92 2.3681e-37 9404908000.0 13327320.0 14010590.0 12392052.0 12070290.0 13933990.0 12550510.0 11574651.0 13084297.0 16589750.0 13220240.0 True False 12588026.992246248 13337500.226075666 13190863.499904249 13217446.73253497 15030515.739441928 12472177.611714687 12744729.680787807 13038910.627604865 13577469.59356479 13103118.958791079 0.9606893619629967 1.0178874409994834 1.006696462223164 1.0087252335954093 1.1470945037370457 0.9518480028258399 0.9726485519111598 0.9950997673616375 1.0362013529958425 1.0 23.643406924127053 -4.259669013088785 22.920406861870884 1.0153348918474896 0.9606893034595824 0.098479871946905 0.04941473282966785 128.37384234043944 1661524.0661432461 0.012606598521974542 0.07805991527153748 5.499598526230546e-05 4.259669013088785 -0.05464558838790723 FDQLFDDESDPFEVLK ddPTM_KYSE-520_SHP099_60min_R1 6 FDQLFDDESDPFEVLK 16 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 ;;;;; 216.15 5.1391000000000006e-17 372278000.0 862524.0 1206809.0 2150260.0 593755.0 1299537.0 1118849.0 895972.0 900363.0 1493572.0 1274887.0 False True 814678.0743210344 1148832.0841827595 2288869.200137645 650185.2966810506 1401803.1685459167 1111865.8483750352 986545.593604059 897239.8508993038 1222376.974686159 1263592.493027076 0.6447316510795207 0.9091792571753927 1.8113982259062058 0.5145529909911538 1.1093791521250191 0.8799243858369539 0.780746640272197 0.7100705772237268 0.967382270337662 1.0 20.26909984053016 FDRPPAR ddPTM_KYSE-520_SHP099_60min_R1 4 FDRPPAR 7 1 Q16629;C9JAB2;Q16629-4;Q16629-3;Q16629-2;F8WEA1;A0A0B4J1Z1 Q16629;A0A0B4J1Z1 SRSF7 Serine/arginine-rich splicing factor 7 0 ;;; 124.59 0.0025398000000000005 1947840000.0 2353250.0 2189110.0 1568620.0 1472283.0 2366260.0 2254210.0 1779680.0 1874330.0 1983710.0 1926470.0 False True 2222710.531412429 2083941.8696788994 1669735.7550807414 1612208.3336619742 2552471.199822295 2240140.6392332553 1959587.422403015 1867828.3867019129 1623518.269259658 1909402.9745709787 1.1640866600785762 1.0914101933601197 0.8744805456563783 0.8443520593258839 1.3367902081517427 1.1732152243748284 1.0262827954603517 0.978226394101849 0.8502753430686596 1.0 20.86469018126591 -7.289271075086772 2.9405189869618003 0.925858275260151 1.0732507115598415 0.16340129505644874 0.1389482090678395 0.5552576790987118 9.563759090000568 0.09522235040618533 0.04226696946812289 5.137228992939168e-08 7.289271075086772 0.14739243629969057 FDS(ph)NEEDSASVFSPSFGLK ddPTM_KYSE-520_SHP099_60min_R1 1 FDSNEEDSASVFSPSFGLK 19 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 FDS(0.981)NEEDS(0.019)ASVFSPSFGLK 150.68 8.6803e-07 104910000.0 222110.0 223730.0 172380.0 185080.0 209490.0 221920.0 204120.0 237160.0 239080.0 207850.0 True False 209789.11553469193 212981.67497442337 183491.89061775204 202669.94755366916 225975.67116494922 220534.91496295593 224754.4416192254 236337.3473135602 195669.09871634375 206008.61070485308 1.018351198121787 1.0338484117033366 0.8907001022430049 0.9837935747454402 1.0969234266071664 1.0705130926731725 1.0909953756313095 1.147220722983074 0.9498102921371444 1.0 17.65234511457136 -5.746399503295231 22.29303878444639 1.0687558750760184 0.9789018696507481 0.26379502302250757 0.06221101447898008 79.72373637705499 118168.86812628656 0.018222492609087804 0.023389413665779284 1.793083427837746e-06 5.746399503295231 -0.08985400542527033 FDSNEEDS(ph)ASVFSPSFGLK ddPTM_KYSE-520_SHP099_60min_R1 1 FDSNEEDSASVFSPSFGLK 19 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 FDS(0.4)NEEDS(0.6)ASVFSPSFGLK 133.47 3.4154000000000004e-06 88777000.0 129340.0 122440.0 89668.0 114130.0 99680.0 107090.0 100930.0 118280.0 137240.0 115940.0 True False 122165.25236710212 116557.79861381328 95448.14275387266 124976.8808855643 107524.24889838231 106421.61158698153 111132.98938187544 117869.71428675967 112320.67553886164 114912.86179995506 1.0631120873116215 1.0143146449239233 0.8306132251760697 1.0875795705369264 0.9357024724139658 0.9261070512041076 0.9671066201043728 1.0257312579330937 0.9774421572964913 1.0 16.810180757334138 -7.23137879156963 23.680046041617352 1.0011900480442688 0.9718432254616917 0.027641262784650844 0.06932725212955829 1461.8427133992336 1151559.187128982 0.03247410160891894 0.01874427824213242 5.869771678174963e-08 7.23137879156963 -0.029346822582577148 FDSPDLLLEAGDPATS(ph)PCR ddPTM_KYSE-520_SHP099_60min_R1 1 FDSPDLLLEAGDPATSPCR 19 0 A0A096LNM2;Q969U6-2;Q969U6 A0A096LNM2 FBXW5 F-box/WD repeat-containing protein 5 1 FDSPDLLLEAGDPAT(0.416)S(0.584)PCR 172.37 3.6323999999999996e-07 0.0 93217.0 108180.0 81718.0 62365.0 75912.0 107440.0 81180.0 100200.0 118380.0 99863.0 True False 88046.06718651741 102982.87041850964 86985.673033423 68292.15084927905 81885.8425198033 106769.42710715558 89386.46664045032 99852.4295868557 96885.1761169517 98978.29151223841 0.88954927228291 1.040459163773059 0.8788358710219547 0.6899710007707589 0.8273111332668166 1.0787155999146925 0.90309163024296 1.0088316140970084 0.9788527831375236 1.0 16.594824519268066 -6.245813692529987 24.719325055926394 0.9887748881402246 0.8659802951172225 0.3411038926888046 0.08927256066165959 979.8347508658974 1550067.1615090717 0.032458519960808695 0.03235085249133616 5.677881279200448e-07 6.245813692529987 -0.12279459302300211 FDSSLDRK ddPTM_KYSE-520_SHP099_60min_R1 2 FDSSLDRK 8 1 Q02790;F5H1U3 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ; 172.94 0.00025671 2817100000.0 4578900.0 4548600.0 3233400.0 2699600.0 4315900.0 4214000.0 2936600.0 3486500.0 3831900.0 3395000.0 False True 4324899.289189152 4330078.428412204 3441830.13762292 2956169.172335667 4655536.775888127 4187698.8628960657 3233460.1864541313 3474406.1452552136 3136123.5543381213 3364922.941270036 1.285289251692875 1.286828407065359 1.0228555594571376 0.8785250729159071 1.3835492987934428 1.2445155315549323 0.9609314218749133 1.0325366155172204 0.932004568626003 1.0 21.682142035966447 -6.769765177656378 24.992550303845157 0.9840794932831401 1.1762021705238856 0.34006670205494427 0.13775839704694298 255.61344166768927 767297.4215312552 0.061885394900060946 0.04249643197503561 1.6991621384244463e-07 6.769765177656378 0.1921226772407455 FDSSLLS(ph)SDDETK ddPTM_KYSE-520_SHP099_60min_R1 1 FDSSLLSSDDETK 13 0 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 FDSS(0.002)LLS(0.499)S(0.499)DDETK 80.312 0.009624899999999999 249460000.0 743240.0 609910.0 556350.0 613940.0 602000.0 570890.0 538800.0 598310.0 753710.0 596870.0 True False 702010.9955877925 580609.0081064256 592213.2111914741 672288.6730122076 649373.9750885456 567326.8637491069 593267.1621812598 596234.6022566033 616855.2634829159 591582.1961578329 1.1866668742689772 0.9814511185044528 1.0010666565656294 1.136424789959099 1.0976901930214513 0.958999218424324 1.0028482365330977 1.0078643443446855 1.0427211425381373 1.0 19.17421910919072 -6.251127178043877 24.624366806867076 1.0030007119220827 1.0738245264422468 0.30305139933732117 0.058817380577975996 861.0951458432896 2056199.06318856 0.020037006164591795 0.019812148918778028 5.608837037686881e-07 6.251127178043877 0.07082381452016406 FDSSLLSS(ph)DDETK ddPTM_KYSE-520_SHP099_60min_R1 1 FDSSLLSSDDETK 13 0 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 FDSSLLS(0.383)S(0.617)DDETK 288.96 3.7038999999999994e-30 210210000.0 841000.0 731040.0 693180.0 626040.0 699680.0 697520.0 687290.0 675430.0 830430.0 663000.0 True False 794348.0535080638 695919.7410865895 737863.4919272144 685538.6533742109 754740.8353653703 693166.5189480928 756767.9805040049 673087.0909765464 679644.8454367298 657126.335806194 1.2088209073731913 1.059034927024804 1.122863978692877 1.043237222463713 1.148547538335103 1.0548451358256445 1.151632401972698 1.0242887163406273 1.034268158805276 1.0 19.325811236946937 -1.0000000011785337 0.05289067655528132 0.8259884037660491 1.5819198693268903 0.40289423846133965 0.05011120034087065 469.90364655213443 1.8749702291484462 6.046062829491156 28.448483351635023 0.09999999972863259 1.0000000011785337 0.7559314655608412 FDTIY(ph)QILLK ddPTM_KYSE-520_SHP099_60min_R1 2 FDTIYQILLK 10 0 A0A3B3IUA7;Q14258 A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 1 FDTIY(1)QILLK;FDTIY(1)QILLK 226.59 4.1807e-16 24176000.0 87336.0 83632.0 72788.0 76857.0 80810.0 82579.0 73176.0 77099.0 99615.0 85713.0 True False 82491.29798000028 79614.19318580878 77480.03094491771 84161.4661721003 87169.28725399551 82063.59382987538 80573.34420893803 76831.56156404181 81527.4270897967 84953.64950370503 0.9710153532180231 0.9371485939793158 0.9120271041627073 0.9906751112373321 1.0260805481958 0.9659807943424065 0.9484388802558038 0.904393890231767 0.9596695087977486 1.0 16.37438830468471 -5.267713269400063 24.894313829645046 0.9679420950871204 0.9397721750262324 0.14681675641597125 0.03341918664496711 1105.8762668212755 4388020.226825566 0.010486948747601166 0.0159546798984093 5.3986693669452105e-06 5.267713269400063 -0.02816992006088792 FDVHDVTLHADAIHR ddPTM_KYSE-520_SHP099_60min_R1 1 FDVHDVTLHADAIHR 15 0 P13639 P13639 EEF2 Elongation factor 2 0 206.1 2.448e-12 681460000.0 551870.0 574510.0 451130.0 417460.0 648120.0 497810.0 442580.0 459670.0 483280.0 452030.0 False True 521256.67097442964 546909.6772429085 480210.56163352064 457135.2728860746 699123.3567016415 494702.98313675646 487320.30556455394 458075.5120577846 395528.5344973844 448025.3658740182 1.1634534798215055 1.220711412569207 1.0718378873408536 1.020333462580371 1.5604548535723541 1.1041852109683086 1.08770695296209 1.0224320919065828 0.8828262072299817 1.0 18.773220890167632 -7.08186402573148 1.8711924050331086 0.9532181070952991 1.1948231485138077 0.3426691851375028 0.14026652308408005 0.4365584582318538 2.9447474597663996 0.09373182333185108 0.04433860864370057 8.282014266327771e-08 7.08186402573148 0.24160504141850858 FDVQFPENNWINPDK ddPTM_KYSE-520_SHP099_60min_R1 2 FDVQFPENNWINPDK 15 0 O60884 O60884 DNAJA2 DnaJ homolog subfamily A member 2 0 ; 193.16 2.9283e-10 368290000.0 241447.0 282370.0 220355.0 166665.0 288950.0 323200.0 239946.0 285090.0 251950.0 285420.0 False True 228053.45359733855 268804.52135398897 234559.43588046558 182504.79149034063 311688.72109939373 321182.7889150472 264202.0833272913 284101.08933050645 206202.23114264192 282891.4008534002 0.8061519470346866 0.9502039317670483 0.8291501090979391 0.6451408241458643 1.1017963789606913 1.1353572004880077 0.9339346566571882 1.0042761585310016 0.7289095056286279 1.0 18.10988879774324 -5.774670221848841 24.999835983162917 0.989319464669958 0.8193781368079859 0.3259300859521638 0.12366941783331117 302.1378291081372 570891.0929200709 0.03998560580263938 0.04560281944142307 1.6800792890734218e-06 5.774670221848841 -0.16994132786197214 FEAFEHENK ddPTM_KYSE-520_SHP099_60min_R1 3 FEAFEHENK 9 0 F8VXU5;Q9UBQ0;Q9UBQ0-2;Q05DG7 F8VXU5 VPS29 Vacuolar protein sorting-associated protein 29 0 ;; 144.65 0.0006006000000000001 1286920000.0 2208930.0 1736740.0 1029810.0 1023860.0 1788500.0 1855870.0 1377530.0 1558820.0 1278830.0 1679330.0 False True 2086396.249507215 1653304.4035001134 1096193.200354258 1121167.3465652666 1929244.774827014 1844286.826929977 1516784.1757972364 1553412.8172513226 1046626.7086808697 1664452.442698971 1.2535030716312008 0.9933022783271713 0.6585908808405126 0.6735953024570966 1.1590867514956886 1.1080441709343152 0.9112811738482086 0.9332875950077651 0.6288114228026401 1.0 20.666616219218074 -4.339626149485493 3.8337495295197854 0.8899651207497131 1.2646359679654524 0.28713027236851063 0.17471140691650722 0.30988758919815856 7.704520420585446 0.04726815232921841 0.2713072365418626 4.574818308719542e-05 4.339626149485493 0.3746708472157393 FEALNLS(ph)FK ddPTM_KYSE-520_SHP099_60min_R1 2 FEALNLSFK 9 0 P14859-6;P14859-2;P14859;P14859-3;P14859-5;P14859-4;A0A0C4DG88;A0A0A0MT46;Q9UKI9;Q9UKI9-2;H0YLC5;Q9UKI9-3;P09086;U3KQ96;P09086-3;U3KQN1;H0YNW1;H0YLL6;P09086-4;B5ME60;P09086-5;H0YKT2;P09086-2 P14859-6 POU2F1;POU2F3;POU2F2 POU domain, class 2, transcription factor 1;POU domain protein;POU domain, class 2, transcription factor 3;POU domain, class 2, transcription factor 2 1 FEALNLS(1)FK;FEALNLS(1)FK 85.81299999999999 0.0048448 184832000.0 574470.0 504040.0 533320.0 414880.0 445590.0 429630.0 382900.0 430220.0 618820.0 476940.0 True False 542603.0039224462 479825.1618205361 567698.6605421714 454310.07046177913 480655.39793970867 426948.5198068437 421607.2687438833 428727.66723410244 506457.88718273427 472714.68265370524 1.1478446171301575 1.015041798843468 1.2009329969512461 0.9610661295972296 1.0167981143327856 0.9031843847330034 0.8918852834802647 0.9069480660666802 1.0713817568339592 1.0 18.850610150351304 -5.289148019744706 22.401047274216133 0.9571918814066888 1.1106499536365566 0.5209993864084278 0.06842614293669222 152.82599199562227 123551.67703298427 0.019171575413385086 0.028449514667413238 5.138684809363518e-06 5.289148019744706 0.15345807222986785 FEDENFHYK ddPTM_KYSE-520_SHP099_60min_R1 2 FEDENFHYK 9 0 Q08752 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D 0 ; 135.43 0.00082494 2213200000.0 4021400.0 3536900.0 2121900.0 2413800.0 4005200.0 3891900.0 3146100.0 3437700.0 3205400.0 3459000.0 False True 3798324.925537848 3366982.0150048626 2258681.0691600414 2643206.826264565 4320386.453529302 3867609.208472992 3464138.4909770973 3425775.4210652146 2623380.1615583464 3428355.9510612767 1.1079143997174634 0.9820981435613723 0.6588233839782148 0.7709837788127973 1.260191915659134 1.1281235856725265 1.010437230097051 0.9992472981123027 0.7652006381502646 1.0 21.709085475207278 -4.291985748701194 5.285266120256373 0.9540991338473058 1.1115180699670268 0.07108494725554859 0.16972886536006512 0.4759770949536568 38.61680584830274 0.04644494415589246 0.2357638223142471 5.1052175238413114e-05 4.291985748701194 0.15741893611972102 FEDENFHYKHDR ddPTM_KYSE-520_SHP099_60min_R1 6 FEDENFHYKHDR 12 1 Q08752 Q08752 PPID Peptidyl-prolyl cis-trans isomerase D 0 ;;;;; 158.2 1.7675e-05 4906550000.0 4174930.0 5140750.0 5678020.0 4600830.0 4418510.0 3356200.0 3498040.0 3500010.0 6146020.0 2041260.0 False True 3943338.3103833743 4893780.653576931 6044034.2543532215 5038091.499910021 4766221.599117084 3335252.7108808197 3851656.0207804944 3487869.2822184754 5030057.696556063 2023176.024476247 1.949083155729968 2.418860541234328 2.987399109732867 2.4901894046585817 2.355811625610257 1.6485232478692697 1.903767133548154 1.723957401641018 2.486218517668638 1.0 20.948190414969908 -6.148179799673683 4.526818233763442 1.8086577755420825 2.4878011478279713 0.40674082088305796 0.41280424455965287 0.24821976495047682 8.19460585371157 0.13698149129804824 0.13723636627994262 7.109191293217948e-07 6.148179799673683 0.6791433722858888 FEDENFILK ddPTM_KYSE-520_SHP099_60min_R1 14 FEDENFILK 9 0 P62937;C9J5S7;F8WE65;P62937-2 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ;;;;;;;;;;;;; 186.16 4.5858999999999996e-05 31377860000.0 15560850.0 17057210.0 11858300.0 9827320.0 16284150.0 17294260.0 13703130.0 14191350.0 13254470.0 14715950.0 False True 14697658.630714577 16237756.028205816 12622704.991950858 10761305.538108494 17565619.96086068 17186320.10835998 15088376.11006101 14142123.519135976 10847792.365998063 14585578.131835843 1.007684337080482 1.1132747623327852 0.8654236998943062 0.7378045244994346 1.204314275518522 1.1783091457202863 1.0344722693663897 0.9695963637031335 0.7437341371008572 1.0 23.79803923600829 -7.5364402546100395 23.57738802509593 0.8667995952365651 1.018823016900179 0.1441011571593135 0.14301158420479088 245.98240485367484 427634.9115636255 0.10241344773539918 0.038766592289561724 2.9077679502068616e-08 7.5364402546100395 0.15202342166361393 FEDRFDK ddPTM_KYSE-520_SHP099_60min_R1 2 FEDRFDK 7 1 Q5TB53;Q9HD45 Q5TB53 TM9SF3 Transmembrane 9 superfamily member 3 0 ; 94.302 0.009415600000000001 360740000.0 840360.0 926700.0 538020.0 583380.0 905020.0 827800.0 730000.0 799600.0 792720.0 607080.0 False True 793743.5555838725 882179.9409949424 572701.6300624369 638824.2598004073 976239.9251405892 822633.3931431817 803795.5241134356 796826.3742280432 648782.0308449904 601701.7435010924 1.319164460061817 1.4661415735009264 0.9518031753241831 1.0616958762381374 1.6224648435621774 1.3671780114123737 1.3358703590194538 1.3242879596651802 1.0782452234057927 1.0 19.19868901158805 -7.856008390181211 3.988039224159468 1.0049898083749451 1.3053410888909391 0.26838632852493416 0.17801877604255797 0.30971979844409164 8.494779732140339 0.1807496766258112 0.0481562860651513 1.3931298886610768e-08 7.856008390181211 0.300351280515994 FEEESKEPVADEEEEDS(ph)DDDVEPITEFR ddPTM_KYSE-520_SHP099_60min_R1 19 FEEESKEPVADEEEEDSDDDVEPITEFR 28 1 E9PJF4;P54105 E9PJF4 CLNS1A Methylosome subunit pICln 1 FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEES(0.001)KEPVADEEEEDS(0.999)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR;FEEESKEPVADEEEEDS(1)DDDVEPITEFR 417.02 1.6317999999999995e-124 199917850000.0 20898446.0 19137296.0 18587125.0 18713018.0 18624005.0 18804203.0 18743139.0 19707224.0 24588801.0 19692776.0 True False 19739167.540360734 18217911.574493084 19785280.817951515 20491497.60444598 20089608.237406895 18686838.994012054 20637878.40552874 19638864.23964467 20124094.571630992 19518313.32538788 1.0113152305371378 0.9333753009690988 1.0136777952127853 1.049860060284628 1.0292696864987776 0.9574002979912045 1.0573597247608797 1.0061762977285535 1.0310365571114775 1.0 24.218325052038836 -4.923020960098023 11.104199831981871 1.019499083649028 0.9724521708812711 0.25124055992205974 0.03167844745319757 0.5967955938925705 82.6909542496197 0.007975572155395304 0.016623498796052544 1.1939304811122627e-05 4.923020960098023 -0.047046912767756965 FEELCSDLFR ddPTM_KYSE-520_SHP099_60min_R1 3 FEELCSDLFR 10 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066;P48741 A0A0G2JIW1;P17066 HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ;; 200.86 9.640900000000001e-06 383116000.0 491250.0 522891.0 363795.0 315797.0 550614.0 541815.0 437116.0 469765.0 438620.0 472271.0 False True 463999.3832174034 497770.53148460836 387245.80779258086 345810.2519321702 593944.1892348911 538433.3316089306 481303.95112105244 468135.49485897506 358977.6647104016 468087.04636127764 0.991267301294385 1.0634144553968718 0.8272944333813029 0.7387733854640102 1.268875509057507 1.1502846229018662 1.0282359976899975 1.0001035031797483 0.7669036507225548 1.0 18.836417315519732 -3.906044095496604 14.146105934169073 0.9882320054935175 1.0558760988766083 0.0 0.15800971840232855 43786944.77094589 104763800.396921 0.04176068726160499 90693926.09563969 0.0001241526244522443 3.906044095496604 0.06764409338309074 FEELNADLFR ddPTM_KYSE-520_SHP099_60min_R1 10 FEELNADLFR 10 0 E9PKE3;P11142;E9PNE6;A8K7Q2;P11142-2;E9PN89;P54652 E9PKE3 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ;;;;;;;;; 325.34 3.7593e-37 3743994000.0 2291361.0 2611150.0 1742566.0 1606892.0 2531452.0 2599935.0 2101457.0 2363661.0 2067581.0 2287300.0 False True 2164254.6376150926 2485706.434583944 1854894.592564181 1759610.532550302 2730662.8704083837 2583707.841268077 2313892.7818039 2355462.011673623 1692160.409875512 2267036.3014924703 0.9546625416585905 1.0964563879932205 0.8182024219652054 0.7761721907107919 1.2045077834045672 1.1396852531947241 1.020668606091831 1.039004982021214 0.7464196355221585 1.0 21.112376062107263 -3.954176674122216 18.96274174574043 0.9874326986168599 0.7123984916334793 0.002096671737159883 0.1474679782429697 27636.841183003184 372415.0091834843 0.03717129596589713 301874.20108897093 0.00011112795587892522 3.954176674122216 -0.27503420698338055 FEELNMDLFR ddPTM_KYSE-520_SHP099_60min_R1 1 FEELNMDLFR 10 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 142.83 0.0016660999999999998 72401000.0 66919.0 88679.0 53354.0 50246.0 89723.0 92801.0 74039.0 72090.0 68135.0 64897.0 False True 63206.86967028079 84418.72773010735 56793.2842094183 55021.36473298925 96783.68964596267 92221.7945362168 81523.58467100632 71839.93661593256 55763.40154357576 64322.063069101976 0.9826623502790461 1.3124381231276006 0.8829518441969839 0.8554042284663526 1.504673280488326 1.4337505691809325 1.267428014294637 1.1168786134666426 0.8669405003951515 1.0 15.97302605988205 -4.159701825818048 19.04395612876886 1.1494524185201584 0.9825184541248896 0.038690412516631634 0.2254299987262779 103330.85881181984 19296670.05515214 0.06014665465339611 1763.0463978717307 6.923061253905993e-05 4.159701825818048 -0.16693396439526886 FEELTNLIR ddPTM_KYSE-520_SHP099_60min_R1 1 FEELTNLIR 9 0 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 0 123.16 0.004957199999999999 0.0 59056.0 60627.0 43610.0 38373.0 56061.0 60290.0 42908.0 44108.0 57046.0 51234.0 False True 55780.045954782705 57714.38791701772 46421.170378467075 42019.95838273684 60472.68175654303 59913.70774656005 47245.55938172508 43954.99964288458 46687.884412634085 50780.10661944882 1.0984625607977534 1.1365550755837337 0.9141605535874895 0.8274885812595588 1.1908734695996472 1.1798657335550582 0.9303950410302996 0.8655948671452726 0.9194128866746527 1.0 15.631975803664222 -6.963777495472724 24.747509771744163 0.9151012447268028 1.0508982848631019 0.23981349772971738 0.11140532951961996 237.8602737726196 162507.51204513098 0.05102832201886344 0.034403173068857255 1.0869823807601626e-07 6.963777495472724 0.13579704013629912 FEETTADGRK ddPTM_KYSE-520_SHP099_60min_R1 1 FEETTADGRK 10 1 I6L8B7;Q01469 I6L8B7 FABP5 Fatty acid-binding protein, epidermal 0 92.838 0.054502999999999996 0.0 157290.0 147970.0 125640.0 98162.0 166370.0 189490.0 121510.0 176750.0 155930.0 151960.0 False True 148564.8101501586 140861.2990925018 133738.95543110766 107491.28696651866 179462.37248418818 188307.32262225353 133793.41662331985 176136.89550376017 127617.04267542044 150613.75262309102 0.9863960465943646 0.9352485854661985 0.8879597852248439 0.7136883922912022 1.1915404095487248 1.2502664553713776 0.8883213803067251 1.1694609053699132 0.8473133459119132 1.0 17.200493983724648 -5.770695549223256 24.999986946959 1.06743779218879 0.885220470972448 0.28559056234109836 0.13656207481754581 255.00884507671546 688751.3645791616 0.04237453180236025 0.04869759007282266 1.6955259880299449e-06 5.770695549223256 -0.18221732121634204 FEGKPLLQR ddPTM_KYSE-520_SHP099_60min_R1 2 FEGKPLLQR 9 1 H3BV85;H3BTW0;A0A0B4J295;A0A087WZT3;H3BVE0;Q9H3K6-2;Q9H3K6 H3BV85 BOLA2B;BOLA2 BolA-like protein 2 0 ; 100.48 0.0026739999999999997 2434900000.0 4241700.0 3560800.0 2701400.0 2480200.0 4009600.0 3575600.0 2929100.0 3014600.0 2941400.0 3102200.0 False True 4006404.4453806877 3389733.8231302304 2875536.566392825 2715917.4623006782 4325132.708496722 3553283.354098524 3225202.0132611813 3004143.0562129286 2407315.906659922 3074716.921475079 1.303015707689486 1.1024539525752581 0.9352199372595581 0.8833065064727101 1.4066767182006996 1.1556456886424054 1.0489427468054224 0.9770470365030245 0.7829390373618607 1.0 21.55202216196034 -7.275322149279035 2.5038659944328336 0.8928400252875716 1.11987579199499 0.2762827236533266 0.15321068080520078 0.43348582904892213 5.251046982197666 0.10706683279302953 0.04604335504934364 5.304907928423813e-08 7.275322149279035 0.22703576670741843 FEGLS(ph)PLQR ddPTM_KYSE-520_SHP099_60min_R1 5 FEGLSPLQR 9 0 Q9Y3E2 Q9Y3E2 BOLA1 BolA-like protein 1 1 FEGLS(1)PLQR;FEGLS(1)PLQR;FEGLS(1)PLQR;FEGLS(1)PLQR;FEGLS(1)PLQR 123.38 0.00070323 1854550000.0 2586440.0 2495050.0 2312280.0 2089910.0 2229130.0 2160090.0 2055380.0 2241940.0 2801450.0 2194810.0 True False 2442965.0172596886 2375184.0528535973 2461333.2685788083 2288534.418045646 2404549.848985262 2146608.077065297 2263157.8689757185 2234163.233412731 2292777.29880752 2175365.690936343 1.123013490301101 1.0918550672881333 1.131457243641356 1.0520228518730532 1.1053543130719652 0.986780331237702 1.0403574343408841 1.0270288084074177 1.0539732737168617 1.0 21.05282651564337 -5.885562735759784 1.3986770321539521 1.0254333685012382 1.110123760708014 0.6211772248803514 0.029304220476163982 0.2712462109171935 1.104993985654324 0.011153202693516821 0.01386715105046787 1.3014792975556364e-06 5.885562735759784 0.08469039220677588 FEHCNFNDVTTR ddPTM_KYSE-520_SHP099_60min_R1 1 FEHCNFNDVTTR 12 0 E9PNW4;A0A2U3TZL5;P13987;P13987-2 E9PNW4 CD59 CD59 glycoprotein 0 67.997 0.028306 0.0 107420.0 120190.0 100220.0 107250.0 139100.0 117800.0 106230.0 120650.0 127550.0 107240.0 False True 101461.19846353901 114415.8919911321 106680.34155766951 117443.00775411181 150046.37862926352 117064.76650430869 116968.76510489076 120231.49330992169 104390.13527383996 106289.93703145756 0.9545701248605554 1.0764508399065997 1.0036730149355193 1.1049306362779516 1.4116705947888162 1.1013720562244966 1.1004688531358588 1.13116534516657 0.9821262312249245 1.0 16.697645491042188 -5.348974102488884 5.408063402700069 1.1362773518828413 1.0184654554055943 0.1483044079161604 0.11349079321801787 0.4019880784219504 19.019735484659183 0.03325223794928369 0.05002954319674563 4.477400026642861e-06 5.348974102488884 -0.11781189647724699 FEHQEWK ddPTM_KYSE-520_SHP099_60min_R1 4 FEHQEWK 7 0 Q9UHB9-4;Q9UHB9-2;Q9UHB9 Q9UHB9-4 SRP68 Signal recognition particle subunit SRP68 0 ;;; 157.58 0.0018750999999999998 2594550000.0 5919680.0 5637200.0 3340910.0 2854590.0 4776530.0 5052650.0 3765200.0 3814950.0 3714580.0 3966670.0 False True 5591303.549810483 5366380.450390294 3556270.4042449975 3125889.375336219 5152415.736261944 5021114.537164652 4145823.1608108385 3801716.828866024 3040105.908941599 3931528.3898225664 1.4221704628369285 1.3649603712088376 0.904551627670046 0.7950824883849544 1.310537588791131 1.2771406026629912 1.0545067337026004 0.9669819093020969 0.7732631199640916 1.0 21.90665884154413 -4.70618885908111 7.55734203587075 1.0234456140221688 1.3992654544243313 0.4535347321001221 0.16787047511957104 0.23380625565511529 26.760995698739503 0.04704024485101096 0.12478503037717557 1.967030712640403e-05 4.70618885908111 0.37581984040216243 FEIGEGENLDLPYGLER ddPTM_KYSE-520_SHP099_60min_R1 2 FEIGEGENLDLPYGLER 17 0 Q02790 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed 0 ; 188.09 2.2873e-11 39436000.0 45953.0 60030.0 94652.0 28930.0 55584.0 55567.0 41491.0 38527.0 70139.0 65663.0 False True 43403.895484965586 57146.068693132955 100753.41936855459 31679.498501878337 59958.14457030177 55220.1857414679 45685.31519313777 38393.358829269404 57403.52566030471 65081.2769050409 0.6669183142840843 0.8780723337145631 1.5481168188442642 0.4867682382461766 0.9212810107857254 0.8484803674340754 0.7019732458506694 0.5899294029723567 0.8820282635828016 1.0 15.989954936744557 FEIINAIYEPTEEECEWKPDEEDEIS(ph)EELKEK ddPTM_KYSE-520_SHP099_60min_R1 5 FEIINAIYEPTEEECEWKPDEEDEISEELKEK 32 2 P55209;P55209-2;H0YIV4;F5H4R6;F8VY35;F8W118;F8VV59;H0YH88;F8W543;F8VRJ2 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 FEIINAIYEPTEEECEWKPDEEDEIS(1)EELKEK;FEIINAIYEPT(0.001)EEECEWKPDEEDEIS(0.999)EELKEK;FEIINAIYEPTEEECEWKPDEEDEIS(1)EELKEK;FEIINAIYEPTEEECEWKPDEEDEIS(1)EELKEK;FEIINAIYEPTEEECEWKPDEEDEIS(1)EELKEK 317.72 1.5185999999999997e-67 1735320000.0 733613.0 759042.0 616134.0 661508.0 636609.0 706612.0 632197.0 741683.0 934332.0 696176.0 True False 692918.0244687415 722576.48297473 655850.9834892561 724377.5214303676 686706.5064902715 702201.7724035874 696105.6424081393 739110.2747831142 764680.8613930034 690008.4222567328 1.004216763329486 1.0471995118718702 0.9504970697955225 1.0498096806720527 0.9952146732417235 1.0176713062530094 1.0088364430849481 1.071161236504606 1.108219605337639 1.0 19.396254445999887 -7.2602250722183435 24.474675840371148 1.0672678191536364 1.010797251775835 0.2746282794470609 0.03610760351462334 89.8204738316656 1810407.9699520732 0.016831895176393774 0.009060731468417451 5.492561492200074e-08 7.2602250722183435 -0.05647056737780143 FEINLIS(ph)PDTK ddPTM_KYSE-520_SHP099_60min_R1 5 FEINLISPDTK 11 0 O60343-2;A0A3B3IRT3;O60343-3;O60343 O60343-2 TBC1D4 TBC1 domain family member 4 1 FEINLIS(0.999)PDT(0.001)K;FEINLIS(1)PDTK;FEINLIS(1)PDTK;FEINLIS(1)PDTK;FEINLIS(1)PDTK 102.52 0.0012751 606789000.0 1299775.0 1223432.0 1141924.0 1016277.0 1036262.0 1136358.0 1023028.0 1192529.0 1443013.0 1170539.0 True False 1227673.8897127744 1164656.490311129 1215534.2481830015 1112863.6605251776 1117809.923875758 1129265.5682114027 1126445.6540311233 1188392.39523736 1180998.2145974885 1160168.9351255621 1.058185452603854 1.0038680187425302 1.0477217682539028 0.9592255289999945 0.9634889282350766 0.9733630456922941 0.9709324391703446 1.0243270262263515 1.0179536607482704 1.0 20.145903464437833 -5.252303492872361 24.995761976645614 0.9858326383282802 1.0333193752675598 0.46044851634884076 0.024478792206490237 666.1704218479405 1822633.1110373174 0.007163887694425925 0.012192499011809476 5.593665693619921e-06 5.252303492872361 0.04748673693927963 FELLPT(ph)PPLS(ph)PSRR ddPTM_KYSE-520_SHP099_60min_R1 1 FELLPTPPLSPSRR 14 1 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 2 FELLPT(0.995)PPLS(0.905)PS(0.099)RR 75.018 0.044091000000000005 72082000.0 155420.0 151290.0 133130.0 136360.0 132730.0 146780.0 132460.0 140480.0 186440.0 142340.0 True False 146798.54277791115 144021.80130908024 141711.7728155314 149319.6134018711 143175.0958696056 145863.89157472347 145850.34948502158 139992.70766827842 152587.19576993142 141078.97833884435 1.0405415782451268 1.0208594009177456 1.004485391687252 1.0584115022667255 1.0148577595006876 1.0339165571810898 1.033820567758276 0.9923002655437658 1.081572871923176 1.0 17.10614350768943 -3.2106511283154475 3.630743418070911 1.026943871400755 11.129515678164513 0.024760302166874415 0.02585804236816293 10257.455538987502 166.18594367238055 0.0063163263140681904 862138.1794889773 0.0006156712469786485 3.2106511283154475 10.102571806763757 FELLPTPPLS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 3 FELLPTPPLSPSR 13 0 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1;P04198 H0YBT0 MYC;MYCN Myc proto-oncogene protein;N-myc proto-oncogene protein 1 FELLPT(0.176)PPLS(0.801)PS(0.024)R;FELLPTPPLS(0.98)PS(0.02)R;FELLPTPPLS(0.99)PS(0.01)R 180.84 1.4522999999999998e-07 164748000.0 251407.0 291400.0 218618.0 213338.0 236247.0 326869.0 244762.0 300264.0 312228.0 303146.0 True False 237460.95254257068 277400.70659968245 232710.4660811675 233613.57937759158 254838.2948384442 324828.8893251005 269504.93160692154 299222.45426614425 255535.2658273656 300460.36228401924 0.7903237243590339 0.923252253611613 0.7745130316430588 0.7775187968280531 0.8481594473934323 1.0811039661133277 0.8969733297204903 0.9958799623069587 0.8504791243838452 1.0 18.196815152866993 -6.025978693919911 23.19272359496796 0.9608570422723942 0.8200166685764229 0.5113912170270674 0.06992740470038628 250.5519419887101 223682.12230519537 0.022218072593538706 0.02231875478817147 9.419358058768182e-07 6.025978693919911 -0.14084037369597135 FEPES(ph)PGFESR ddPTM_KYSE-520_SHP099_60min_R1 6 FEPESPGFESR 11 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 FEPES(1)PGFESR;FEPES(1)PGFESR;FEPES(1)PGFESR;FEPES(1)PGFESR;FEPES(1)PGFESR;FEPES(1)PGFESR 238.07 3.5476e-14 3789100000.0 5639980.0 4980880.0 4942400.0 4390570.0 5021160.0 4924960.0 4618930.0 5165970.0 6086740.0 4885490.0 True False 5327119.066378608 4741591.048346693 5260995.0121196 4807848.452726995 5416296.725507634 4894221.497818851 5085856.520812708 5148050.455816462 4981541.450228879 4842208.359453708 1.1001424703210432 0.979220780346931 1.0864867063905401 0.9929040833900444 1.118559203453751 1.0107416150863469 1.050317570676882 1.063161696824888 1.0287746995651568 1.0 22.207233728934284 -8.027663632890539 6.241539295563324 1.0000067933716956 1.0480300982139392 0.11558547225641536 0.043090861211662564 0.40603948295433323 70.36667582824808 0.037470434233335764 0.009718703437037653 9.382884430059776e-09 8.027663632890539 0.0480233048422436 FERPDGSHFDVR ddPTM_KYSE-520_SHP099_60min_R1 1 FERPDGSHFDVR 12 1 B4DEM9;Q9Y2S7 B4DEM9 POLDIP2 Polymerase delta-interacting protein 2 0 120.87 0.00012153 344290000.0 210790.0 216700.0 133160.0 132960.0 201310.0 206360.0 162670.0 163380.0 170730.0 166060.0 False True 199097.0585005527 206289.4067266685 141743.70666353317 145596.4784241185 217151.9517027822 205072.03069464487 179114.2711062089 162813.27291317863 139729.7357530594 164588.83759272523 1.2096631910920836 1.2533620732964361 0.8611987832022832 0.884607246479234 1.3193601393560133 1.2459656055296728 1.0882528470699018 0.9892121196946525 0.8489624071519379 1.0 17.32850697000381 -7.334848310140119 3.1751888124517285 0.9248420925663999 1.1224938126637891 0.24065492737339544 0.14707320552237632 0.4252713021806712 8.313509951414314 0.10259505898058598 0.0442801265278727 4.6254254949976613e-08 7.334848310140119 0.19765172009738918 FESPATGILS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 FESPATGILSPR 12 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 FESPATGILS(1)PR;FESPATGILS(1)PR;FESPATGILS(1)PR;FESPATGILS(1)PR;FESPATGILS(1)PR;FESPATGILS(1)PR;FESPATGILS(1)PR;FESPATGILS(1)PR;FESPATGILS(1)PR 216.98 9.179700000000001e-11 6113590000.0 3865660.0 3794440.0 3328409.0 2948280.0 3499440.0 4652480.0 4389460.0 4921660.0 5941270.0 5393100.0 True False 3651224.1337978425 3612149.40682944 3542963.5697826906 3228483.644767298 3774826.018910064 4623442.146570171 4833189.453801317 4904587.910184078 4862485.135228601 5345321.329768307 0.6830691568463865 0.6757590767674221 0.6628158255055288 0.6039830808276659 0.7061925347477069 0.8649512089800923 0.9041906287064715 0.91754781567017 0.9096712499114372 1.0 22.349845246349275 -6.3032480932917085 2.315382232547667 0.925449450539107 0.6566357940824302 0.9405265459446104 0.032312269159679226 0.06985321887588555 0.7360434178315175 0.012824764893135113 0.011509026663505697 4.974528309235827e-07 6.3032480932917085 -0.26881365645667676 FEVLTDLANKT(ph)HPS(ph)IFGIFDGHGGETAAEY(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 1 FEVLTDLANKTHPSIFGIFDGHGGETAAEYVK 32 1 Q5SGD2-4;Q5SGD2 Q5SGD2-4 PPM1L Protein phosphatase 1L 3 FEVLT(0.601)DLANKT(0.716)HPS(0.685)IFGIFDGHGGET(0.39)AAEY(0.608)VK 43.302 0.066332 159190000.0 80148.0 62222.0 93551.0 44772.0 109140.0 86496.0 78084.0 71087.0 87615.0 88358.0 True False 75702.03066892311 59232.76172287389 99581.44714689245 49027.117418807364 117728.69707834521 85956.14637993785 85977.49274640213 70840.41578883046 71706.32459441395 87575.21686148383 0.8644229883970447 0.6763644310074767 1.1370962095863109 0.5598286727208759 1.3443152217887695 0.9815122298343054 0.9817559787764066 0.8089093961466004 0.8187969971896338 1.0 16.418235035110044 -4.741111000452874 24.99997787432449 0.9490345427910679 0.7703937481788486 0.11792033265595148 0.2005238666941866 533.2458789287364 655779.387418074 0.049520869101148085 0.13068017568075035 1.8150516980719445e-05 4.741111000452874 -0.17864079461221927 FEVNPVWK ddPTM_KYSE-520_SHP099_60min_R1 1 FEVNPVWK 8 0 B4E1E0;P17812-2;P17812;A0A3B3IRI2 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 0 93.429 0.046364999999999996 0.0 263590.0 273090.0 172390.0 160300.0 271180.0 243520.0 172810.0 199470.0 220700.0 198150.0 False True 248968.13724636208 259970.3464835529 183502.5352337525 175534.8638040478 292520.3231968632 242000.10135084277 190279.32126307234 198778.08512664778 180626.4433942493 196394.5451583672 1.2676937490580553 1.32371470029333 0.934356578416071 0.8937868598259757 1.4894523825037136 1.232213965798798 0.968862557305939 1.0121364876318666 0.9197121195428166 1.0 17.58339533391497 -6.768306537185156 24.63315983837497 0.9761890986666552 1.1847711515027315 0.2881049571576283 0.16545234404282522 205.5206346339732 737212.4517224652 0.07381848046272024 0.05104110906319103 1.704878613242131e-07 6.768306537185156 0.20858205283607634 FFDEESYSLLR ddPTM_KYSE-520_SHP099_60min_R1 2 FFDEESYSLLR 11 0 A6NLM8;P51571 A6NLM8 SSR4 Translocon-associated protein subunit delta 0 ; 140.45 0.00071418 75731000.0 93221.0 108514.0 80888.0 85696.0 107072.0 106942.0 89814.0 85390.0 125668.0 94128.0 False True 88049.84529854379 103300.82455716524 86102.16990537607 93840.52207455815 115497.95724365568 106274.53530987934 98893.27562016994 85093.80202017586 102849.85903248076 93294.0991504758 0.9437879362179868 1.1072600035565958 0.9229112097057742 1.0058569934117807 1.2379985261165003 1.13913458919269 1.0600164053319505 0.9121027245563139 1.102426198109189 1.0 16.509498213085568 -1.0746876133114465 13.894735314155401 1.046660116957441 0.005223917466410377 0.0 0.09998336772090255 0.0 0.0 0.02373856494619307 0.0 0.08420005723055485 1.0746876133114465 -1.0414361994910306 FFDS(ph)EDEDFEILS(ph)L ddPTM_KYSE-520_SHP099_60min_R1 2 FFDSEDEDFEILSL 14 0 Q9Y4P1-4;Q9Y4P1 Q9Y4P1-4 ATG4B Cysteine protease ATG4B 2 FFDS(1)EDEDFEILS(1)L;FFDS(1)EDEDFEILS(1)L 71.889 0.0212 27562000.0 66526.0 69555.0 64689.0 51541.0 62059.0 76279.0 55204.0 64319.0 80257.0 79569.0 True False 62835.67016370693 66213.47339581644 68858.9564460596 56439.441143633296 66942.6902325915 75802.9144667417 60784.55905912073 64095.892401167424 65684.35191432839 78864.08056374527 0.7967590532285139 0.8395897463395464 0.8731345874298426 0.7156545887581064 0.8488362478084329 0.9611842796477003 0.7707508744743307 0.8127387264644412 0.8328804627505446 1.0 16.267080739459733 -5.981725920817559 24.991507252824565 0.8625652020086559 0.8095393239401767 0.15260015296683271 0.07371081506033446 590.9895731336634 808229.6859747212 0.022885971113661873 0.025945765776806524 1.042975433775047e-06 5.981725920817559 -0.05302587806847925 FFDS(ph)EDEDFEILSL ddPTM_KYSE-520_SHP099_60min_R1 9 FFDSEDEDFEILSL 14 0 Q9Y4P1-4;Q9Y4P1 Q9Y4P1-4 ATG4B Cysteine protease ATG4B 1 FFDS(1)EDEDFEILSL;FFDS(1)EDEDFEILSL;FFDS(1)EDEDFEILSL;FFDS(1)EDEDFEILSL;FFDS(1)EDEDFEILSL;FFDS(1)EDEDFEILSL;FFDS(1)EDEDFEILSL;FFDS(1)EDEDFEILSL;FFDS(1)EDEDFEILSL 150.68 2.5908999999999996e-06 5027227000.0 2828432.0 3258303.0 2448686.0 2129001.0 2350041.0 3031827.0 2300881.0 2547988.0 3271824.0 2968811.0 True False 2671533.2386205937 3101769.233067491 2606532.2175961267 2331340.614932511 2534975.8567957776 3012904.2430938734 2533476.5059145815 2539149.6243328718 2677743.2375711165 2942509.6442400063 0.9079097646630142 1.0541237270502195 0.8858194306001481 0.7922966775983674 0.8615012908311174 1.0239233196709023 0.8609917424990904 0.8629197288455057 0.9100202076866009 1.0 21.488615713109365 -4.79529207670699 24.965117709422337 0.8926446003649107 0.98101684074891 0.16193955957709683 0.07261000906937697 256.4843681709896 189147.14942915982 0.01902610971462747 0.039609586064629436 1.6021675201997637e-05 4.79529207670699 0.08837224038399938 FFEDYGLFMR ddPTM_KYSE-520_SHP099_60min_R1 1 FFEDYGLFMR 10 0 I3L0K7;Q12931-2;Q12931 I3L0K7 TRAP1 Heat shock protein 75 kDa, mitochondrial 0 107.47 0.007582899999999999 92148000.0 33965.0 43053.0 28775.0 27344.0 43111.0 48759.0 34459.0 26263.0 25021.0 28061.0 False True 32080.893742451106 40984.6692561295 30629.882541627856 29942.765538726642 46503.590431963916 48454.67699476731 37942.45200743137 26171.89978283029 20477.817128081162 27812.401371127646 1.1534744272659112 1.4736113113438714 1.101303053012354 1.0765976349604442 1.6720451359600972 1.7421968117096365 1.3642278313594252 0.9410154640584045 0.7362836762933892 1.0 14.763440694412033 -7.294127547673218 4.576505068618469 0.8656871687955876 1.3789006548111993 0.4981943566711048 0.21960749030567675 0.18664157408999352 9.677835134369216 0.13521621397822325 0.06466489797423622 5.080102234466143e-08 7.294127547673218 0.5132134860156117 FFEHFIEGGR ddPTM_KYSE-520_SHP099_60min_R1 4 FFEHFIEGGR 10 0 J3KR44;F5H6Q1;F5GYJ8;Q96FW1;F5GYN4;F5H3F0;Q96FW1-2 J3KR44 OTUB1 Ubiquitin thioesterase OTUB1 0 ;;; 180.09 2.4244e-05 2139710000.0 1608270.0 1430490.0 951220.0 866030.0 1504420.0 1361930.0 1041460.0 994050.0 1018470.0 1067190.0 False True 1519056.0570932382 1361767.1131907357 1012537.1632058118 948337.2308185864 1622809.295021113 1353429.689687716 1146740.940470108 990601.8725630135 833541.5215393803 1057735.5268612574 1.4361397707808032 1.2874363001039275 0.9572687477090157 0.8965731099462062 1.5342297330568684 1.2795539672416096 1.0841471344665587 0.9365307748549796 0.7880434195236363 1.0 20.012547514561483 -7.123956167333928 2.791843648253859 0.8910592816665611 1.218914155432964 0.37136530385981825 0.18778776310622897 0.3368960484259125 5.029388735568959 0.11330831047997066 0.05835540227856851 7.516987579753369e-08 7.123956167333928 0.327854873766403 FFENLNPMGNS(ph)MEK ddPTM_KYSE-520_SHP099_60min_R1 1 FFENLNPMGNSMEK 14 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 FFENLNPMGNS(1)MEK 46.66 0.06644800000000001 0.0 568380.0 475140.0 422670.0 455790.0 472200.0 518430.0 536080.0 550000.0 582530.0 521400.0 True False 536850.8283625604 452313.56120031985 449915.9844959108 499108.14456173935 509359.45354952017 515194.2860681563 590272.1980366171 548092.178370965 476757.2363862797 516780.801643062 1.038836633744302 0.8752522534936015 0.8706128073361858 0.9658024117282726 0.9856392728407358 0.9969300028757618 1.142209997275238 1.060589280074552 0.9225521437144517 1.0 18.979192949482545 -5.926502483734419 1.8459198343235712 1.0354459885604612 0.9249745833804595 0.2639082377803371 0.06814423273412296 0.41956911929967455 2.9185410100025853 0.025806719643011126 0.029978100952239527 1.1843975933962967e-06 5.926502483734419 -0.11047140518000176 FFGNS(ph)WAETYR ddPTM_KYSE-520_SHP099_60min_R1 2 FFGNSWAETYR 11 0 H3BLU7;O43488 H3BLU7 AKR7A2 Aflatoxin B1 aldehyde reductase member 2 1 FFGNS(1)WAETYR;FFGNS(1)WAETYR 143.94 8.088899999999999e-05 95050000.0 148754.0 157486.0 150468.0 129486.0 141214.0 123927.0 117095.0 126446.0 181846.0 130306.0 True False 140502.3190862529 149920.13616869465 160167.4080373124 141792.31050861458 152326.73840224877 123153.52562461338 128932.10533707238 126007.38833871811 148827.35036461568 129151.59021653382 1.0878868688390797 1.1608075124537032 1.240150491130445 1.0978750650370428 1.1794414466508683 0.9535579501432064 0.9983005638638018 0.9756549503374741 1.1523462476543551 1.0 16.978705881604558 -6.252499483456114 24.98920373722181 1.0133459149071888 1.155406517233892 0.5381198113627159 0.06354364248589671 501.4502770992089 1401677.412018628 0.02097483743759694 0.020680384142081926 5.59114192572899e-07 6.252499483456114 0.14206060232670326 FFIGQFSDDR ddPTM_KYSE-520_SHP099_60min_R1 1 FFIGQFSDDR 10 0 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1;P52701-4 P52701-2 MSH6 DNA mismatch repair protein Msh6 0 95.35799999999999 0.022529 0.0 320180.0 311580.0 314170.0 204050.0 343040.0 296080.0 339480.0 327260.0 359710.0 296350.0 False True 302418.97713699396 296611.2291088849 334421.90088977286 223442.85065013057 370035.296369393 294232.0548947003 373797.95140551956 326124.81144305784 294395.7315511799 293724.5695568114 1.0296005458218942 1.0098277769422865 1.1385561017056487 0.7607223698966485 1.2598036893124862 1.0017277592359897 1.2726138367298572 1.110308245357662 1.0022850046061218 1.0 18.1641044241146 -5.798140154089827 24.999992185907416 1.1162431055020041 0.9974631081153436 0.17902487920542576 0.12721979639769881 299.6956677078097 204146.34339306937 0.03783998036739843 0.04290766965883723 1.5916949775787023e-06 5.798140154089827 -0.11877999738666056 FFMS(ph)GT(ph)AGIWAEALT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 FFMSGTAGIWAEALTR 16 0 A8MTA8-2 A8MTA8-2 3 FFMS(1)GT(1)AGIWAEALT(1)R 57.159 0.028007 129680000.0 0.0 5313.5 5559.7 0.0 2994.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 5058.231484273896 5918.087157834524 0.0 3229.610766470271 0.0 0.0 0.0 0.0 0.0 0.0 FFMT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 FFMTPPR 7 0 C9J5J4;H7C4T7;H0Y322;Q5TKA1-3;Q5TKA1;Q5TKA1-2 C9J5J4 LIN9 Protein lin-9 homolog 1 FFMT(1)PPR;FFMT(1)PPR 121.09 0.011731 530665000.0 328040.0 334130.0 270685.0 233895.0 250773.0 314960.0 247537.0 292779.0 337210.0 319450.0 True False 309842.9672684728 318077.8932606448 288133.78821131296 256124.31047690375 270507.4083968104 312994.2178115198 272560.4556883116 291763.41798413236 275981.16437233734 316619.92152833944 0.9785959322232349 1.0046048010032587 0.9100305085683725 0.8089330236726088 0.8543600386578907 0.9885487189204072 0.8608443030768541 0.9214941895499703 0.8716481358474322 1.0 18.272392506241502 -4.817932116584698 5.743275218166351 0.8951010507504531 0.9915802067874223 0.2843892394389731 0.05628741610219698 0.2075634814123841 14.0019804454217 0.014629045217705104 0.03205682642730138 1.5207852210483822e-05 4.817932116584698 0.09647915603696922 FFPLES(ph)WQIGK ddPTM_KYSE-520_SHP099_60min_R1 2 FFPLESWQIGK 11 0 J3KQ18;P30046;H7C342 J3KQ18 DDT D-dopachrome decarboxylase 1 FFPLES(1)WQIGK;FFPLES(1)WQIGK 105.03 0.00092912 47103000.0 100072.0 100870.0 101645.0 115569.0 106843.0 87143.0 85784.0 88645.0 125402.0 96784.0 True False 94520.80667141377 96024.0537910432 108197.19933775012 126552.64301291307 115250.93624648752 86599.1082129454 94455.88389116018 88337.51118489858 102632.15792716638 95926.56905681253 0.9853454324571308 1.0010162433118288 1.127916909794515 1.3192658119354008 1.201449581483834 0.9027645736152313 0.9846686358105715 0.9208867996996815 1.0699033535368336 1.0 16.549642837521578 -6.261922598235961 24.999765338454505 0.9712640946277883 1.1307322727745086 0.37180553136618144 0.09822553006938947 53.209180055201315 2752793.9400683753 0.03753546887807391 0.03515632251284752 5.471134630361081e-07 6.261922598235961 0.15946817814672032 FFPLESWQIGK ddPTM_KYSE-520_SHP099_60min_R1 4 FFPLESWQIGK 11 0 J3KQ18;P30046;H7C342 J3KQ18 DDT D-dopachrome decarboxylase 0 ;;; 192.26 2.9767e-07 1017233000.0 2549921.0 2537666.0 2191927.0 2151754.0 2660037.0 2663466.0 2095268.0 2336371.0 2589536.0 2336349.0 False True 2408471.798988506 2415752.716245679 2333222.121627199 2356256.053211572 2869366.778359813 2646842.320731451 2307078.137285086 2328266.6743140905 2119341.5392903043 2315650.7655120147 1.0400842108226833 1.0432284316031268 1.007588085551104 1.0175351518045421 1.239118964350985 1.1430231018217492 0.9962979615257168 1.005448105124473 0.9152250291168995 1.0 21.142986259242342 -6.911081343057509 6.895497015502465 0.976205095642303 1.0807032130229401 0.35450427501560533 0.06821782992979131 0.28459511307880453 18.43633843782878 0.03213728451993044 0.021577751329524865 1.2272093541639066e-07 6.911081343057509 0.10449811738063719 FFQGS(ph)QEFLASASASAER ddPTM_KYSE-520_SHP099_60min_R1 52 FFQGSQEFLASASASAER 18 0 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 FFQGS(0.986)QEFLAS(0.014)ASASAER;FFQGS(1)QEFLASASASAER;FFQGS(0.994)QEFLAS(0.005)ASASAER;FFQGS(1)QEFLASASASAER;FFQGS(0.999)QEFLAS(0.001)ASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(0.999)QEFLASASASAER;FFQGS(0.914)QEFLAS(0.085)AS(0.001)ASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(0.999)QEFLAS(0.001)ASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(0.734)QEFLAS(0.266)ASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(0.987)QEFLAS(0.013)ASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(0.846)QEFLAS(0.154)ASASAER;FFQGS(1)QEFLASASASAER;FFQGS(1)QEFLASASASAER;FFQGS(0.942)QEFLAS(0.058)ASASAER 299.46 2.7794999999999997e-38 4948895000.0 4775641.0 4758630.6 4313202.1 3688309.6 4011285.0 4153042.0 3810511.0 4333806.0 5514284.0 4469440.0 True False 4510726.673725688 4530018.843125843 4591238.008733367 4038845.4354532864 4326950.3084103875 4127121.324385293 4195714.63888358 4318773.038503921 4513029.029387468 4429844.238771702 1.0182585279739798 1.0226135726121868 1.036433283262893 0.9117353156807989 0.9767725624615088 0.9316628535746557 0.9471472161845039 0.9749266127021705 1.0187782653592423 1.0 22.078824541264222 -5.234692666092222 24.996297770640076 0.9630657340417381 1.0254529827532328 0.45807768787749004 0.029751180464063137 655.9606821899506 613031.0585391497 0.00810398888107789 0.014031196819628073 5.825152961634545e-06 5.234692666092222 0.0623872487114947 FFQKPKT(ph)PQAPK ddPTM_KYSE-520_SHP099_60min_R1 1 FFQKPKTPQAPK 12 2 Q13111;Q13111-2;Q13111-3;K7EPA1 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 FFQKPKT(1)PQAPK 63.708999999999996 0.025769 427040000.0 599620.0 692940.0 718670.0 448410.0 638020.0 554420.0 474030.0 607890.0 779940.0 647460.0 True False 566357.8832871641 659650.1222758548 764996.6181126572 491026.75158061803 688228.5441627802 550959.6591283429 521949.57848697534 605781.371472593 638322.556687407 641724.0081162571 0.8825567940798634 1.027934304986062 1.192095992104549 0.7651681180231951 1.0724681256402333 0.8585617059047742 0.8133552304192693 0.943990506527609 0.9946995104034911 1.0 19.291593432637317 -5.2631395239673875 24.999544030500907 0.9180460539882859 1.0335695488524352 0.17871194476835384 0.1108823585107874 260.42869352815114 3829453.83785168 0.0305244939379172 0.048098200335258114 5.455825559126583e-06 5.2631395239673875 0.11552349486414937 FFS(ph)GIFAR ddPTM_KYSE-520_SHP099_60min_R1 2 FFSGIFAR 8 0 E7EUN2 E7EUN2 AGAP1 1 FFS(1)GIFAR;FFS(1)GIFAR 121.83 0.00092577 197289000.0 175613.0 209285.0 241021.0 210429.0 228170.0 170194.0 184088.0 184589.0 226291.0 194204.0 True False 165871.3968141636 199230.63445681063 256557.59930723507 230428.1088922143 246125.68089028783 169131.75611574133 202697.41156574534 183948.70384239635 185202.2587318899 192483.5036484258 0.861743441230841 1.0350530340548485 1.3328809713264655 1.197131725704115 1.2786845429613558 0.8786818242079757 1.0530638092289477 0.9556595778637821 0.962172109409255 1.0 17.55437528271496 -6.2686388072783155 24.97392025078244 0.972340962095855 1.1489748273259137 0.3066431350640214 0.12840566325968353 757.7341254620059 2628476.386567701 0.04783660662067648 0.04306265833937773 5.387176353102471e-07 6.2686388072783155 0.17663386523005875 FFT(ph)TPSK ddPTM_KYSE-520_SHP099_60min_R1 1 FFTTPSK 7 0 O76021-2;O76021 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 FFT(0.865)T(0.135)PSK 142.04 0.0075964 2363000000.0 3667600.0 3776400.0 3245700.0 2453200.0 2630500.0 3055300.0 2785600.0 3158500.0 3658100.0 3351900.0 True False 3464150.916820663 3594976.075508038 3454923.0153036127 2686351.3904185244 2837505.384502352 3036230.7393940096 3067195.6328361467 3147543.900699439 2993881.2531966595 3322204.7737387414 1.0427264882056557 1.0821055053335336 1.0399488443981473 0.8086049998041991 0.8541030965135487 0.9139204071328504 0.9232409925726485 0.9474262169448566 0.9011730032003435 1.0 21.6637095700635 -5.123112967842843 6.777579166379862 0.903783253778047 1.061889652226844 0.6579942197512452 0.049005952397387274 0.14398047699058839 7.325955175236374 0.013695227041002274 0.023978036423778593 7.5315962782210395e-06 5.123112967842843 0.15810639844879693 FFTT(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 5 FFTTPSK 7 0 O76021-2;O76021 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 FFT(0.041)T(0.959)PSK;FFT(0.022)T(0.976)PS(0.003)K;FFT(0.363)T(0.637)PSK;FFT(0.381)T(0.618)PS(0.001)K;FFT(0.377)T(0.622)PSK 128.6 0.012315000000000001 8224900000.0 28430100.0 30707200.0 25281900.0 19816000.0 21791300.0 24037400.0 21563000.0 25612000.0 29879500.0 27275400.0 True False 26853025.67900073 29231980.01955309 26911611.72647026 21699306.682102334 23506151.33446347 23887373.670379214 23742798.474600036 25523157.949885737 24454136.00089929 27033761.175940093 0.9933144524077465 1.0813138367727166 0.995481596190968 0.8026743500795074 0.8695109489753066 0.8836126617719348 0.87826471204203 0.9441216034933835 0.9045776442925502 1.0 24.68825891054166 -5.051151654386402 7.598617001526328 0.8928667248545168 1.037776005429545 0.5583075313710737 0.052058837495368826 0.1749229654538302 23.414550591202932 0.01382013697843792 0.024363935724790613 8.888906655877942e-06 5.051151654386402 0.14490928057502828 FFTTGS(ph)DSESESSLSGEELVTKPVGGNYGK ddPTM_KYSE-520_SHP099_60min_R1 1 FFTTGSDSESESSLSGEELVTKPVGGNYGK 30 1 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 FFT(0.022)T(0.126)GS(0.672)DS(0.121)ES(0.037)ES(0.01)S(0.011)LS(0.001)GEELVTKPVGGNYGK 94.64200000000001 0.0019198 100580000.0 109260.0 122510.0 79111.0 110350.0 134110.0 113820.0 103010.0 97636.0 136700.0 110180.0 True False 103199.12999558989 116624.43570874103 84210.62164207548 120837.63082206275 144663.69401847984 113109.60716061473 113423.25608071922 97297.32350441377 111878.72592656939 109203.890918743 0.9450133060952822 1.0679512856874263 0.7711320625446886 1.1065322838357128 1.3247119017592695 1.03576535789167 1.0386374984121747 0.8909693847521538 1.0244939533319073 1.0 16.736664734624718 -4.241761634301456 21.535821918320252 1.0296352927856605 0.9450127976997131 0.033696460329578404 0.13473192972839884 2901.702797433172 3175349.0560464216 0.03576349187057237 1.0145572762121178 5.731105005627907e-05 4.241761634301456 -0.08462249508594732 FFTTGSDS(ph)ESESSLSGEELVTKPVGGNYGK ddPTM_KYSE-520_SHP099_60min_R1 1 FFTTGSDSESESSLSGEELVTKPVGGNYGK 30 1 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 FFTTGS(0.007)DS(0.976)ES(0.012)ES(0.002)S(0.003)LSGEELVTKPVGGNYGK 148.94 7.1333e-07 93848000.0 246020.0 232900.0 243330.0 225170.0 261150.0 277300.0 249050.0 247580.0 341860.0 252920.0 True False 232372.78017128905 221711.13440997302 259015.44114176565 246570.089100171 281701.0192597563 275569.2678407875 274226.4044937686 246721.20276560652 279786.84158929804 250679.32556878257 0.9269722568626008 0.884441243436882 1.0332541008480405 0.9836075972388714 1.123750507229053 1.0992899682314468 1.0939330711519928 0.9842104138656221 1.1161145457626853 1.0 17.935483491233622 -4.9755164914997545 1.5433729170926707 1.0671154275310517 0.8985490730837579 0.5513948362991548 0.05263583386378734 0.3096898902089852 1.3737078085952203 0.015841065601184097 0.0526664879481194 1.0579947399129501e-05 4.9755164914997545 -0.16856635444729384 FFVGGNWK ddPTM_KYSE-520_SHP099_60min_R1 4 FFVGGNWK 8 0 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 0 ;;; 159.19 0.0017743 5064230000.0 7465650.0 7393470.0 5561790.0 4986820.0 8472200.0 7685430.0 5902880.0 6166070.0 5636570.0 5391380.0 False True 7051515.512095702 7038276.603375281 5920311.882578642 5460765.873457901 9138913.939776026 7637462.380604491 6499600.716957147 6144681.342341559 4613110.974366665 5343616.567630173 1.3196148007346569 1.317137282268864 1.1079222858993842 1.0219232245324972 1.7102488219563665 1.429268414741743 1.2163299208872016 1.1499106016632943 0.8632937853945838 1.0 22.349385059953388 -7.471756843449231 2.3274662493397162 0.9356625012867055 1.3085832741219956 0.4041873769728004 0.1786123406745019 0.34493272600029384 3.47072200118726 0.1539859407261614 0.05350307742945162 3.374762048699479e-08 7.471756843449231 0.3729207728352901 FFWGNAETLK ddPTM_KYSE-520_SHP099_60min_R1 1 FFWGNAETLK 10 0 F5H7V1;O43847;O43847-2;G3V1R5 F5H7V1 NRD1 Nardilysin 0 140.16 0.0005 0.0 208270.0 170900.0 144680.0 155920.0 241260.0 197630.0 151000.0 159190.0 180660.0 141110.0 False True 196716.84792404828 162689.70747387016 154006.30429618494 170738.58992094267 260245.7894183759 196396.5178628739 166264.55361798464 158637.80704522514 147856.69806798839 139859.87518191876 1.406528124440083 1.16323360979878 1.1011471595828726 1.2207832282050823 1.8607609157370446 1.4042377601682878 1.1887938081005773 1.1342624669075496 1.057177391840712 1.0 17.09362259720337 -7.0569344151429485 2.6640825218215434 1.06783977918351 1.3531159949886997 0.3117355904573723 0.197815220744503 0.4283020592475777 5.965282452812852 0.12030939261322335 0.0646407693566471 8.771332711726691e-08 7.0569344151429485 0.2852762158051898 FGAVWTGDNTAEWDHLK ddPTM_KYSE-520_SHP099_60min_R1 2 FGAVWTGDNTAEWDHLK 17 0 Q14697;Q14697-2;F5H6X6;E9PKU7 Q14697 GANAB Neutral alpha-glucosidase AB 0 ; 256.45 1.0895e-24 1859450000.0 1359510.0 1053080.0 588070.0 603310.0 1068170.0 1048820.0 770320.0 668590.0 698290.0 757200.0 False True 1284095.270184006 1002488.4560946929 625977.933145268 660648.4010082337 1152228.9019440722 1042273.925339974 848191.4631987155 666270.8173400784 571498.1384584064 750491.7970926852 1.7110050704863615 1.3357753675366104 0.8340903066099205 0.8802873043616278 1.5352984621653003 1.3887878979858508 1.1301808580513564 0.8877789469800086 0.761498181155772 1.0 19.517476777650693 -4.439444190953129 3.5791880574343153 1.0737615207070812 1.6950004841326234 0.4278780844506712 0.23554144012500908 0.2717923445605821 6.084023151907538 0.06702345813480558 0.33442251186980587 3.6354301866898805e-05 4.439444190953129 0.6212389634255422 FGDES(ph)PLLTMR ddPTM_KYSE-520_SHP099_60min_R1 5 FGDESPLLTMR 11 0 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 FGDES(1)PLLTMR;FGDES(1)PLLTMR;FGDES(1)PLLTMR;FGDES(1)PLLTMR;FGDES(1)PLLTMR 244.71 2.2927e-14 942228000.0 804643.0 810757.0 689521.0 619342.0 784919.0 711219.0 647166.0 676863.0 909780.0 723368.0 True False 760007.8487739476 771807.016748932 733968.626932608 678204.0774680381 846687.659721803 706780.0184077073 712587.8550115004 674515.1202340119 744586.8856874491 716959.5222917878 1.0600428966262339 1.07650012692742 1.0237239399324105 0.945944724048205 1.1809420663182413 0.9858018429666137 0.993902490804065 0.9407994444064279 1.0385340629933326 1.0 19.45153214477634 FGDFLQHS(ph)PSILQSK ddPTM_KYSE-520_SHP099_60min_R1 5 FGDFLQHSPSILQSK 15 0 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 1 FGDFLQHS(1)PSILQSK;FGDFLQHS(0.999)PS(0.001)ILQSK;FGDFLQHS(0.997)PS(0.003)ILQSK;FGDFLQHS(0.998)PS(0.002)ILQSK;FGDFLQHS(0.996)PS(0.004)ILQSK 237.39 7.379600000000001e-19 3326408000.0 2808240.0 3115880.0 2729660.0 2939510.0 2610830.0 2616140.0 2472670.0 2382690.0 3057670.0 2735510.0 True False 2652461.329112351 2966188.4477687716 2905618.251210424 3218880.146604089 2816287.4674093463 2599811.6998521416 2722631.6145336535 2374425.0045140246 2502474.205588099 2711275.5095945774 0.9783075603072809 1.094019562848599 1.0716794515821475 1.1872198657839148 1.0387315702307478 0.9588887926188279 1.0041884732476982 0.8757593966793428 0.9229877954978833 1.0 21.370540291179292 -6.188816286678341 3.266376347587583 0.946069459400086 1.0853467413834437 0.5244539076219294 0.0586512409059269 0.20065095170290906 4.197822575828204 0.021182541025554905 0.020730115709067392 6.47416425050604e-07 6.188816286678341 0.13927728198335765 FGDFVLK ddPTM_KYSE-520_SHP099_60min_R1 1 FGDFVLK 7 0 F2Z3P2;F2Z303;F8WDG4;E9PFD2;P11172 F2Z3P2 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase 0 85.265 0.064725 173200000.0 345600.0 351970.0 255560.0 212530.0 323010.0 342940.0 251120.0 292020.0 284210.0 264320.0 False True 326428.87906348036 335060.83288225904 272033.80651045777 232728.78730052523 348429.0493245035 340799.5842528663 276505.6602950219 291007.05077798036 232604.62835106274 261978.33043784797 1.2460148078580213 1.2789639216429363 1.0383828542452498 0.8883512881067774 1.3299918689540822 1.300869364589366 1.0554524102542917 1.110805807074258 0.8878773597889087 1.0 17.99908795847907 -7.479323184085259 2.0342055570890434 0.9506990574563815 1.1666041209171374 0.2841602425793688 0.1338864521549503 0.494472565288359 3.720105008191806 0.12023545568657443 0.040600081955339436 3.3164756722663485e-08 7.479323184085259 0.21590506346075589 FGDILHVINAS(ph)DDEWWQAR ddPTM_KYSE-520_SHP099_60min_R1 3 FGDILHVINASDDEWWQAR 19 0 A0A0C4DFT3;A0A590UJD9;A0A590UK70;A0A590UK02;Q12959-7;A0A590UK81;A0A590UKA8;A0A590UJR5;A0A590UJ81;A0A590UJ18;A0A590UJ68;A0A590UJX2;A0A590UJS9;A0A590UJR4;A0A590UJ29;A0A590UK48;A0A590UJ64;E7EQD7;Q12959-9;Q12959-8;Q12959-5;Q12959-3;Q12959-6;Q12959;C9JUA9;A0A590UJ08;Q12959-4;Q12959-2;A0A590UJ25;A0A590UJL2;A0A590UJC5 A0A0C4DFT3;A0A590UJ08 DLG1 Disks large homolog 1 1 FGDILHVINAS(1)DDEWWQAR;FGDILHVINAS(1)DDEWWQAR;FGDILHVINAS(1)DDEWWQAR 215.42 8.744399999999999e-19 202612000.0 380226.0 404007.0 368510.0 380896.0 398196.0 355567.0 331195.0 374742.0 476551.0 349103.0 True False 359134.10581826034 384597.8972931302 392264.74423684715 417096.24131944205 429531.7597746814 353347.77446211805 364675.42275171186 373442.1074674402 390021.35127309867 346010.2190180239 1.0379291884427055 1.1115217879535986 1.133679650705385 1.2054448637475508 1.2413846070607146 1.0212061813229623 1.0539440823067587 1.0792805730630382 1.1271960475039675 1.0 18.400455121284118 -6.2878981705321175 24.890135773902706 1.0611315825654861 1.1466959472527594 0.35866337347733246 0.05977533701022602 936.3799542697137 880862.011604992 0.0226430041281699 0.01997427953663572 5.153494649287732e-07 6.2878981705321175 0.08556436468727324 FGESEEVEMEVES(ph)DEEDDKQEK ddPTM_KYSE-520_SHP099_60min_R1 41 FGESEEVEMEVESDEEDDKQEK 22 1 Q15459;Q15459-2;H7C1L2 Q15459 SF3A1 Splicing factor 3A subunit 1 1 FGESEEVEMEVES(1)DEEDDKQEK;FGES(0.001)EEVEMEVES(0.999)DEEDDKQEK;FGES(0.001)EEVEMEVES(0.999)DEEDDKQEK;FGES(0.001)EEVEMEVES(0.999)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGES(0.003)EEVEMEVES(0.997)DEEDDKQEK;FGES(0.03)EEVEMEVES(0.97)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGES(0.002)EEVEMEVES(0.998)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK;FGES(0.004)EEVEMEVES(0.996)DEEDDKQEK;FGESEEVEMEVES(1)DEEDDKQEK 323.88 8.332299999999998e-55 22867653100.0 19110974.4 17662730.1 17091089.7 15971447.799999999 16695136.0 15160048.5 15875359.5 17415383.3 21218703.7 16194300.8 True False 18050850.553249035 16814186.033697616 18192808.688772373 17489369.396921135 18008948.220870215 15065429.013977049 17480195.76683795 17354973.400113307 17365921.988071572 16050831.893887369 1.1246052960110642 1.0475585405701593 1.133449581245738 1.0896238595322654 1.1219946941023384 0.938607364003009 1.0890523234185092 1.0812507111685965 1.0819328308263592 1.0 23.9361447365176 FGESTTGFNFS(ph)FK ddPTM_KYSE-520_SHP099_60min_R1 1 FGESTTGFNFSFK 13 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 FGESTTGFNFS(1)FK 105.63 0.00068097 114130000.0 521310.0 492810.0 544490.0 468840.0 484180.0 514110.0 434940.0 485630.0 642690.0 448510.0 True False 492391.8950942795 469134.66787710896 579588.6966148028 513398.41263811436 522282.2113926438 510901.2487905782 478907.97980533936 483945.4628768938 525993.6968964665 444536.5503355 1.1076522160498663 1.0553342970854576 1.3038043692411265 1.1549070875063998 1.1748914931707364 1.149289633000912 1.0773196927089541 1.0886516811984328 1.1832406052989104 1.0 18.76194251850852 -6.66489861180833 5.47463565769801 1.09492696045797 1.1612734783438887 0.1837058051165441 0.07200033074648528 0.4113998942553034 18.97691969702157 0.028489028338546007 0.02174973861208458 2.1632234799874715e-07 6.66489861180833 0.06634651788591861 FGEVVDCTLK ddPTM_KYSE-520_SHP099_60min_R1 1 FGEVVDCTLK 10 0 Q14103-3;Q14103;H0YA96;H0Y8G5;Q14103-4;Q14103-2;D6RAF8;D6RD83;D6RF44;D6RBQ9 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 0 96.331 0.021373 0.0 53051.0 67530.0 56027.0 38857.0 62781.0 66707.0 49888.0 57966.0 59179.0 51007.0 False True 50108.15527545341 64285.75743540345 59638.590066369536 42549.957597216955 67721.50752497332 66290.6568692948 54931.16589996041 57764.929475366094 48433.58538118837 50555.11766284552 0.9911589091657759 1.2715974248962927 1.1796746367816235 0.8416548030010461 1.3395579054253473 1.3112551198355493 1.0865599456478168 1.1426128974835574 0.9580352617156239 1.0 15.625569522184087 -7.754844010749008 22.537467146599216 0.979017576173193 1.150750571947771 0.17862639892255072 0.14245257404512868 70.2703308690059 240151.0907288313 0.10321155238333668 0.036711167759361264 1.7585551357754085e-08 7.754844010749008 0.17173299577457812 FGEYHKDDPSSFR ddPTM_KYSE-520_SHP099_60min_R1 2 FGEYHKDDPSSFR 13 1 F5H365;Q15436-2;Q15436 F5H365 SEC23A Protein transport protein Sec23A 0 ; 128.96 4.6665e-05 946130000.0 1907560.0 1870040.0 1258900.0 1256640.0 1749350.0 1751360.0 1337610.0 1392270.0 1482430.0 1391820.0 False True 1801743.8441734165 1780200.4714127334 1340050.7083112174 1376070.6877774086 1887013.8925600434 1740429.1126059927 1472828.672615581 1387440.5403282593 1213258.0810191976 1379489.5576195745 1.306094587103999 1.2904776709470853 0.9714105488580775 0.997521641375767 1.3679073408980673 1.2616471817367358 1.0676620670888375 1.0057637135886732 0.8794978362234047 1.0 20.39570310522705 -7.102787773418332 2.639168287819292 0.9516568999878879 1.1903830047962767 0.4191063207472173 0.1252491594573991 0.3238599915892871 4.35670213392028 0.07725297138401734 0.03986493079773218 7.89245703910004e-08 7.102787773418332 0.23872610480838874 FGEYNSNMS(ph)PEEK ddPTM_KYSE-520_SHP099_60min_R1 1 FGEYNSNMSPEEK 13 0 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 1 FGEYNS(0.366)NMS(0.634)PEEK 87.13799999999999 0.055699 257070000.0 648790.0 593410.0 602520.0 500980.0 489470.0 511550.0 523380.0 518850.0 737800.0 515850.0 True False 612800.3253691997 564901.6928734314 641359.4032660853 548592.9885748709 527988.5042966609 508357.2267001628 576288.3580965622 517050.2304505009 603834.1184244549 511279.9703252266 1.198561181615223 1.1048774167978765 1.2544191841861414 1.0729796205900837 1.0326798132944772 0.9942834771657403 1.127148317056081 1.0112859107733163 1.181024396555872 1.0 18.963753983194934 -5.398812262249931 7.200293216030101 1.0581425364987893 1.177409011594747 0.44332431251523197 0.06467587366700679 0.23979477814148134 13.037968463991641 0.01736985718617908 0.0258155546332438 3.991974309905608e-06 5.398812262249931 0.11926647509595778 FGGEHIPNS(ph)PFHVLACDPLPHEEEPSEVPQLR ddPTM_KYSE-520_SHP099_60min_R1 5 FGGEHIPNSPFHVLACDPLPHEEEPSEVPQLR 32 0 Q14315 Q14315 FLNC Filamin-C 1 FGGEHIPNS(1)PFHVLACDPLPHEEEPSEVPQLR;FGGEHIPNS(1)PFHVLACDPLPHEEEPSEVPQLR;FGGEHIPNS(1)PFHVLACDPLPHEEEPSEVPQLR;FGGEHIPNS(1)PFHVLACDPLPHEEEPSEVPQLR;FGGEHIPNS(1)PFHVLACDPLPHEEEPSEVPQLR 192.38 1.2172000000000001e-15 3331190000.0 1081368.0 1042949.0 886037.0 936323.0 957351.0 1073596.0 830956.0 1035347.0 1244350.0 1038350.0 True False 1021382.3613863367 992844.1645416345 943152.3627293257 1025310.8564042252 1032689.0771179306 1066895.2891337855 914957.141829046 1031755.6229088063 1018407.407510801 1029151.0268240754 0.9924513844564559 0.9647215410215519 0.9164372751391614 0.9962686036162245 1.0034378339054604 1.036675144197434 0.8890406927470812 1.0025308200806724 0.9895606970859964 1.0 19.973023281062478 FGGEHVPNS(ph)PFQVTALAGDQPSVQPPLR ddPTM_KYSE-520_SHP099_60min_R1 3 FGGEHVPNSPFQVTALAGDQPSVQPPLR 28 0 Q60FE5;P21333-2;P21333;A0A087WWY3;H0Y5F3 Q60FE5 FLNA Filamin-A 1 FGGEHVPNS(0.994)PFQVT(0.006)ALAGDQPSVQPPLR;FGGEHVPNS(0.976)PFQVT(0.024)ALAGDQPSVQPPLR;FGGEHVPNS(1)PFQVTALAGDQPSVQPPLR 173.81 1.5627000000000002e-10 2497574000.0 919074.0 1011705.0 733851.0 644602.0 686314.0 966324.0 602382.0 826114.0 985968.0 1020340.0 True False 868091.1330914036 963101.1731998353 781156.2096631143 705864.7802733427 740323.0072075075 960292.8134763135 663276.6512417804 823248.403350458 806941.0654306347 1011300.5814125075 0.8583908177714288 0.9523391866883426 0.7724273317158138 0.697977231741966 0.7320504119294392 0.9495622084336685 0.6558649954649153 0.8140491743815745 0.797924059633745 1.0 19.947780431908253 -4.770595121426536 24.97711426868184 0.7896096417911975 0.9053650062686127 0.12962005186526881 0.10238209555432776 284.28436671480654 775542.2918322064 0.025538952457333005 0.05437904752078097 1.6959181128109664e-05 4.770595121426536 0.11575536447741519 FGHEFLEFEFRPDGK ddPTM_KYSE-520_SHP099_60min_R1 3 FGHEFLEFEFRPDGK 15 1 P61326;Q96A72;F5H6N1;P61326-2 P61326 MAGOH;MAGOHB Protein mago nashi homolog;Protein mago nashi homolog 2 0 ;; 136.17 1.4167e-05 1758995000.0 2217260.0 1995010.0 1337650.0 1404890.0 2240400.0 1774080.0 1571000.0 1616820.0 1493830.0 1593180.0 False True 2094264.167801774 1899166.725028938 1423877.0593156721 1538410.3232044182 2416706.7338677356 1763007.3086584373 1729812.0114824753 1611211.6287886268 1222588.1283898114 1579065.6646752823 1.3262679410057572 1.202715483918448 0.9017212464109129 0.9742535460175278 1.530466267446012 1.116487647156194 1.095465533941676 1.0203575853952565 0.7742478072570993 1.0 20.590639735539188 -7.33062526438974 2.169970595156559 0.891380582746818 1.1667199807638202 0.29353236796159776 0.17319300739896284 0.4564556688730071 4.016917431135147 0.13404378087998933 0.052258682661393496 4.6706221609175444e-08 7.33062526438974 0.27533939801700225 FGHVDQENS(ph)PSFMFQGSSNTEFK ddPTM_KYSE-520_SHP099_60min_R1 1 FGHVDQENSPSFMFQGSSNTEFK 23 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 FGHVDQENS(0.867)PS(0.133)FMFQGSSNTEFK 224.91 2.0826999999999998e-21 555370000.0 291330.0 303280.0 250020.0 270000.0 290050.0 328470.0 335000.0 389750.0 476850.0 438810.0 True False 275169.34414804284 288709.97356743936 266136.6892461441 295660.7188215398 312875.28484124976 326419.8968902403 368865.06928493263 388398.048218334 390266.06041027495 434922.48478901375 0.6326859469717481 0.6638193785439631 0.6119175222114586 0.6798009511165385 0.7193817192344732 0.7505243079087774 0.848116807444144 0.8930282103183298 0.8973232565789231 1.0 18.730398770167 -6.835724370831174 0.5832532987719439 0.9893182084162666 0.6220766122319938 0.9739844190149336 0.02018071620374811 0.11730580431477947 0.08192232294737775 0.01883870816100928 0.01369939370028679 1.4597404046347427e-07 6.835724370831174 -0.36724159618427277 FGIHVYQFPECDS(ph)DEDEDFKQQDR ddPTM_KYSE-520_SHP099_60min_R1 3 FGIHVYQFPECDSDEDEDFKQQDR 24 1 H7C299;E7EQM7;C9JM82;E7EPG2;B4DJ62;E7EX32;G3XAH0;Q99719-2;Q99719 H7C299 SEPT5 Septin-5 1 FGIHVYQFPECDS(1)DEDEDFKQQDR;FGIHVYQFPECDS(1)DEDEDFKQQDR;FGIHVYQFPECDS(1)DEDEDFKQQDR 196.15 1.7954e-15 2289160000.0 920820.0 866370.0 711980.0 603270.0 668870.0 677470.0 598590.0 706300.0 1042210.0 520130.0 True False 869740.2789908389 824748.2847521182 757875.3700082775 660604.5994202606 721506.2636502909 673241.6584352626 659101.3188754271 703850.0101516588 852970.935976079 515522.05285501725 1.6871058651596427 1.5998312393903857 1.470112414805693 1.281428400127134 1.3995643050661182 1.3059415299632229 1.2785123647480303 1.3653150359982873 1.654577008398056 1.0 18.97567461854632 -4.83228093392689 2.079539055552383 1.3415363216877056 1.6752462368970213 0.4114320944683273 0.1516570226563902 0.3370341078807419 2.822099694436844 0.04129616387835331 0.13754909758312764 1.4713604093297613e-05 4.83228093392689 0.3337099152093157 FGIYDIDNK ddPTM_KYSE-520_SHP099_60min_R1 1 FGIYDIDNK 9 0 Q99829;Q5JX61;F2Z2V0;A6PVH9;E7ENH5;Q5JX45;Q5JX52;Q5JX44;Q5JX60;Q5JX59;Q5JX58;B0QZ18;Q5JX56;Q5JX57;Q5JX55;E7EV27;Q5JX54 Q99829 CPNE1 Copine-1 0 122.13 0.0052231000000000005 0.0 212510.0 213790.0 110150.0 129770.0 181050.0 193770.0 161720.0 175610.0 153030.0 168070.0 False True 200721.64667181767 203519.20749466761 117250.4452462314 142103.30178322666 195297.60496641367 192560.6095546679 178068.2358351026 175000.84989768226 125243.60957236946 166581.0305564813 1.2049490029043888 1.2217429968753974 0.7038643286966352 0.8530581261774871 1.1723880222976268 1.155957607606335 1.068958663782107 1.0505448868522045 0.7518479694475423 1.0 17.345864597347646 FGLGT(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 7 FGLGTPEK 8 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 FGLGT(1)PEK;FGLGT(1)PEK;FGLGT(1)PEK;FGLGT(1)PEK;FGLGT(1)PEK;FGLGT(1)PEK;FGLGT(1)PEK 160.53 0.0010507 4968090000.0 11426140.0 9970650.0 8089250.0 7299920.0 8256420.0 9195220.0 7594230.0 7876190.0 9655080.0 8856270.0 True False 10792309.236754607 9491645.007749228 8610695.998257622 7993702.201999022 8906153.281396292 9137829.221186336 8361928.880942426 7848869.335206569 7901960.856760066 8777810.337873807 1.2294990232574061 1.0813226354180179 0.9809617281322276 0.9106715563798893 1.0146212937603267 1.041014657352432 0.9526212755888597 0.8941716707344295 0.9002200494883451 1.0 23.065429667550326 -4.4161757408546 1.8455930760702608 0.9587179579637614 1.2706524255730558 0.7655043192327364 0.04667879942545461 0.3099052105250074 1.394730954670205 0.014297721847605822 0.15042497934595342 3.8355200659282255e-05 4.4161757408546 0.31193446760929444 FGLHGS(ph)SGK ddPTM_KYSE-520_SHP099_60min_R1 2 FGLHGSSGK 9 0 Q9NV70-2 Q9NV70-2 EXOC1 Exocyst complex component 1 1 FGLHGS(0.975)S(0.025)GK;FGLHGS(0.859)S(0.141)GK 141.08 0.00026861 1626150000.0 3300600.0 3099000.0 2711100.0 3664000.0 3076500.0 2963500.0 2946600.0 2948400.0 3558600.0 2885500.0 True False 3117509.1384170256 2950119.388306163 2885861.8439133684 4012225.45837823 3318603.0471094786 2945003.6972454917 3244471.0840447294 2938172.68856173 2912447.945005778 2859936.7148850295 1.0900622808160112 1.0315331010479225 1.009064931015224 1.4029070774524195 1.1603763921898138 1.0297443582991597 1.134455551816348 1.0273558408721102 1.018360976257777 1.0 21.44755179250557 -7.293554968819886 1.3086636115420927 1.0000294821533342 1.1295886192818752 0.1761166616431339 0.10569487946189657 0.9091106083433026 2.7442339772573003 0.09701683936670016 0.036529161237716726 5.0868043169176514e-08 7.293554968819886 0.12955913712854095 FGQAAT(ph)MEGIGAIGGTPPAFNR ddPTM_KYSE-520_SHP099_60min_R1 1 FGQAATMEGIGAIGGTPPAFNR 22 0 Q15233-2;Q15233 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 1 FGQAAT(0.737)MEGIGAIGGT(0.263)PPAFNR 89.04899999999999 0.0059068 0.0 164550.0 207080.0 170410.0 122700.0 145050.0 170540.0 131730.0 147880.0 188470.0 184760.0 True False 155422.08347770732 197131.56596658286 181394.9012656406 134361.3711088999 156464.60977839452 169475.59660139921 145046.55396090803 147367.03879545128 154248.59894206675 183123.17014110507 0.8487297558137905 1.0764971238466636 0.9905622599579684 0.733721303565071 0.8544227890868814 0.9254732564470691 0.7920710079950166 0.8047427241560858 0.842321585101497 1.0 17.482454817908664 -5.2284951946989136 24.31008784420678 0.8431236493641758 0.9823865214096645 0.28966474578124446 0.08622997713848109 503.38038768822133 371452.0449149453 0.022439785186009937 0.03886257477833495 5.9088750348113866e-06 5.2284951946989136 0.1392628720454887 FGQAATMEGIGAIGGT(ph)PPAFNR ddPTM_KYSE-520_SHP099_60min_R1 9 FGQAATMEGIGAIGGTPPAFNR 22 0 Q15233-2;Q15233 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 1 FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR;FGQAATMEGIGAIGGT(1)PPAFNR 311.48 1.7290999999999994e-53 8141460000.0 5430910.0 6564490.0 5161360.0 3823690.0 4152260.0 5546680.0 4135070.0 5502980.0 6530870.0 6097180.0 True False 5129646.596049325 6249122.0468996335 5494069.524067991 4187092.34796568 4479019.238872362 5512061.112683529 4553083.2299941685 5483891.446785191 5345028.637835069 6043163.72873426 0.8488346214514575 1.034081207693592 0.9091379566541585 0.6928642902817174 0.7411712539866088 0.9121151370555418 0.7534270846154637 0.9074537267143995 0.8844752314785593 1.0 22.52687259913821 -9.902169042055545 16.039613091905455 0.9999999756298564 0.8529685937297463 0.17385937841324983 0.09564205283968966 0.0 0.0 0.09929049765212872 0.024081482908227595 1.2526535050586697e-10 9.902169042055545 -0.14703138190011011 FGS(ph)ADNIAHLK ddPTM_KYSE-520_SHP099_60min_R1 4 FGSADNIAHLK 11 0 G3V207;A0A0C4DFR1;O75069-3;Q9ULS5;O75069-5;O75069-2;O75069 G3V207 TMCC3;TMCC2 Transmembrane and coiled-coil domains protein 2;Transmembrane and coiled-coil domains protein 3 1 FGS(1)ADNIAHLK;FGS(1)ADNIAHLK;FGS(1)ADNIAHLK;FGS(1)ADNIAHLK 160.65 1.4033e-05 2096850000.0 2342840.0 2494310.0 1729330.0 3068400.0 2721270.0 2445130.0 2412040.0 3220370.0 3708990.0 2202080.0 True False 2212877.994864248 2374479.603564361 1840805.3788258308 3360019.8134518987 2935418.467091706 2429869.0366950813 2655872.542441877 3209199.2881100094 3035530.9120291634 2182571.2843923164 1.0138857826494176 1.0879276294636475 0.8434113433038949 1.5394776965497436 1.3449358965194127 1.11330569318455 1.216854891033417 1.4703754745877784 1.3908049344075983 1.0 21.057597343435397 -5.25201807110771 24.99699049283794 1.3071973243711272 0.9923601930308623 0.4423593536373265 0.16152521347617024 636.7513466564111 1689450.8418521972 0.04429171497563894 0.07541658246811143 5.597343103185486e-06 5.25201807110771 -0.3148371313402649 FGS(ph)ADNIPNLK ddPTM_KYSE-520_SHP099_60min_R1 2 FGSADNIPNLK 11 0 Q6N039;E9PC87;O94876-2;O94876 Q6N039 DKFZp686H13261;TMCC1 Transmembrane and coiled-coil domains protein 1 1 FGS(1)ADNIPNLK;FGS(1)ADNIPNLK 126.1 0.00018233 982450000.0 1194040.0 1261550.0 893040.0 1384330.0 1333270.0 1323410.0 1372590.0 1595150.0 1690900.0 1223880.0 True False 1127804.2209402728 1200943.244374845 950606.7873145196 1515896.3069860104 1438190.7637314028 1315150.1072959853 1511344.7923874822 1589616.7969608086 1383875.1841202346 1213037.3753642307 0.9297357557524841 0.9900298776979115 0.783658283430127 1.2496699094130073 1.1856112539809969 1.08417937815073 1.2459177458845245 1.3104433789465926 1.1408347444403413 1.0 20.210192571902898 -5.2695263824404766 24.996481356801866 1.1865050466556528 0.9100301600231345 0.6246930019907722 0.09642602071541692 365.4639824008343 1129628.5516004472 0.0265963764646977 0.04023572651469185 5.376177730256857e-06 5.2695263824404766 -0.2764748866325183 FGS(ph)LEK ddPTM_KYSE-520_SHP099_60min_R1 7 FGSLEK 6 0 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 FGS(1)LEK;FGS(1)LEK;FGS(1)LEK;FGS(1)LEK;FGS(1)LEK;FGS(1)LEK;FGS(1)LEK 115.49 0.0085638 3710020000.0 6289580.0 5301990.0 4929320.0 5630070.0 5798610.0 5463100.0 5323170.0 5670550.0 5530680.0 5284640.0 True False 5940684.459433118 5047274.441950756 5247071.854390865 6165150.160057732 6254927.617422246 5429002.766465944 5861287.97273276 5650880.185566313 4526447.929096994 5237822.200987706 1.1341897894725925 0.9636208042722378 1.0017659349722514 1.177044566135742 1.1941847923441813 1.0365000105276936 1.1190314882447683 1.0788606349602161 0.8641851050697049 1.0 22.320535657247333 -7.728128678736139 14.061859049281283 0.9321225056330124 1.0869399995589042 0.40522010014076904 0.07561560597584796 1.6780310551705602 708.5233764742754 0.053764589068714876 0.020232827763923728 1.870127951064257e-08 7.728128678736139 0.15481749392589184 FGS(ph)LEKR ddPTM_KYSE-520_SHP099_60min_R1 2 FGSLEKR 7 1 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 FGS(1)LEKR;FGS(1)LEKR 101.25 0.0032074 1342400000.0 3387820.0 3114210.0 2635760.0 2795760.0 2976190.0 2800810.0 2397040.0 2725130.0 3328290.0 2626100.0 True False 3199890.8711482645 2964598.677075491 2805665.306965109 3061468.189824103 3210399.2207953124 2783329.105882285 2639356.196055989 2715677.1600801228 2723956.435363141 2602834.7970748823 1.2293868495781468 1.1389884138659765 1.0779267705035185 1.17620534090932 1.233424120656149 1.0693452803882313 1.0140313933954432 1.0433536400896648 1.0465345086151367 1.0 21.31165231556319 -6.455926892469202 5.781632441156082 1.030923056328823 1.164158179782408 0.7157210119775181 0.04353489587278338 0.13662516551593415 8.755444621820512 0.016565868092460058 0.014385809002155286 3.5000408046518336e-07 6.455926892469202 0.13323512345358512 FGTFGGLGS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 4 FGTFGGLGSK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FGTFGGLGS(1)K;FGTFGGLGS(1)K;FGTFGGLGS(1)K;FGTFGGLGS(1)K 169.6 4.7548999999999995e-05 2572584000.0 2549210.0 2323990.0 2284740.0 2376760.0 2303300.0 2240340.0 2325180.0 2240130.0 2821970.0 2448320.0 True False 2407800.2395758536 2212342.032019894 2432017.996113253 2602646.555801048 2484556.6060156897 2226357.2070480743 2560231.885969971 2232359.5118802735 2309571.384074623 2426629.7895641397 0.9922404521409637 0.9116932634447157 1.0022204485300088 1.0725354839843633 1.0238713036082667 0.9174688354287296 1.0550566456327186 0.9199423502837818 0.9517609130189809 1.0 21.210522594789136 -9.145287413944633 11.579428672484035 1.0000031643013476 0.9836222770332405 0.008589987723558123 0.054469181086744006 0.0 0.0 0.05405963705882015 0.013111387863298258 7.15669626829643e-10 9.145287413944633 -0.016380887268107158 FGWDCHGLPVEYEIDK ddPTM_KYSE-520_SHP099_60min_R1 3 FGWDCHGLPVEYEIDK 16 0 A0A0A0MSX9;P41252;Q5TCD1 A0A0A0MSX9 IARS Isoleucine--tRNA ligase, cytoplasmic 0 ;; 159.13 1.1959000000000003e-07 627621000.0 1544540.0 1447540.0 1173660.0 886130.0 1575970.0 1556470.0 1135240.0 1135340.0 1241000.0 1296620.0 False True 1458861.2872358442 1377998.0055981623 1249316.001522397 970347.5287752999 1699989.8729572995 1546755.4933867694 1250001.1380747072 1131401.7705303489 1015665.6830641745 1285132.9555550946 1.1351831582326126 1.072261044774901 0.9721297676805533 0.7550561399743829 1.322812449567145 1.2035762422096403 0.9726628927158648 0.8803772136102884 0.7903195375030068 1.0 20.29348619286583 -6.999090486622566 6.885608794280691 0.8854763954974312 1.0702347406562989 0.24613625194904742 0.1473103417299814 0.20997165239653998 56.48346688571696 0.06957136544271862 0.04417695972786062 1.0020964263800955e-07 6.999090486622566 0.1847583451588677 FGYVDFESAEDLEK ddPTM_KYSE-520_SHP099_60min_R1 6 FGYVDFESAEDLEK 14 0 P19338 P19338 NCL Nucleolin 0 ;;;;; 254.19 1.8580000000000004e-18 863971000.0 1539160.0 1908650.0 2545830.0 922051.0 1689190.0 1856940.0 1395346.0 1486427.0 2123500.0 1817290.0 False True 1453779.726560608 1816955.5890579403 2709938.275272025 1009682.4498152578 1822119.6428236198 1845350.1486630794 1536401.1909446402 1481270.9316716713 1737925.9290787848 1801190.2244302249 0.8071217058822789 1.0087527482738268 1.5045264173190072 0.5605640293404619 1.0116197712543191 1.0245170796698186 0.8529921882241249 0.8223845053013463 0.9648763942345664 1.0 20.780519122222994 -5.2749090391996205 24.998986195803383 0.8925990078195701 1.096995587221348 0.18732485860206838 0.20566197226270858 1365.954790261801 2535137.7997534713 0.05781801320693031 0.08629621504862839 5.3099564695940585e-06 5.2749090391996205 0.2043965794017778 FHALS(ph)SPQS(ph)PFPSTPTSR ddPTM_KYSE-520_SHP099_60min_R1 1 FHALSSPQSPFPSTPTSR 18 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 2 FHALS(0.553)S(0.447)PQS(1)PFPSTPTSR 80.868 0.0037258000000000005 461920000.0 183890.0 258070.0 179080.0 175260.0 179240.0 198780.0 180290.0 208280.0 260280.0 222440.0 True False 173689.2551243732 245671.9298290327 190623.78333813095 191916.65770615984 193345.16826390504 197539.34028630305 198515.47266083772 207557.52529291733 213019.71312485338 220469.35465570126 0.7878158640034901 1.1143132804678881 0.8646271207888324 0.8704913116195623 0.87697071806576 0.895994550330103 0.9004220698647751 0.941434811278203 0.9662100814760324 1.0 17.750218608864323 -7.743197158398914 1.6954649557687798 0.9973647161569347 0.9059258262406044 0.15165818469351555 0.0784358258913211 0.7111490443467561 3.974194988155473 0.07158877995240219 0.021476394630789684 1.8063539021560142e-08 7.743197158398914 -0.09143888991633031 FHDFDHR ddPTM_KYSE-520_SHP099_60min_R1 9 FHDFDHR 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 0 ;;;;;;;; 155.51 0.0019884 11642560000.0 5955010.0 7924480.0 5960870.0 5732590.0 7648020.0 7684960.0 6535510.0 6943930.0 6673340.0 5144050.0 False True 5624673.724281879 7543776.085913014 6345117.217929213 6277413.630033971 8249875.662718765 7636995.314048825 7196183.131230965 6919843.12755544 5461629.677211506 5098477.719010339 1.103206493049788 1.4796134261379745 1.244512100988618 1.2312329240211868 1.618105661609156 1.4978971636128353 1.4114375952647704 1.3572371027049706 1.0712275267668834 1.0 22.28163512717969 -7.800225558454173 3.7081725727975843 1.0048896310698365 1.3791932157570705 0.47310395280779893 0.1409697859710344 0.1921601754085824 5.116992689514945 0.13396380177633715 0.03701406468424383 1.5840702641114427e-08 7.800225558454173 0.374303584687234 FHDIDDVKK ddPTM_KYSE-520_SHP099_60min_R1 2 FHDIDDVKK 9 1 Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2;D6R967;H0Y9D8 Q9H2U2-6 PPA2 Inorganic pyrophosphatase 2, mitochondrial 0 ; 174.41 0.00011944 816010000.0 2839600.0 2827300.0 1763750.0 1607660.0 2909700.0 2899600.0 2097400.0 2341900.0 2460300.0 2032830.0 False True 2682081.727397742 2691472.264136179 1877444.147099778 1760451.523039396 3138676.836071657 2881502.5208479944 2309425.6606513956 2333776.49550357 2013571.5391158639 2014820.7077178091 1.3311763757062736 1.3358371064117234 0.93181697999638 0.8737509577383004 1.5577946087455303 1.4301533182631805 1.1462189423630085 1.1583047993124125 0.9993800100439904 1.0 20.942220033092365 -7.60510192603055 2.0982531634024997 0.9911819805039579 1.2289827968346718 0.17419152098553448 0.19791706531561506 0.6696335118293775 5.386839246141226 0.19396684457865465 0.060161791677145506 2.4825503988287467e-08 7.60510192603055 0.23780081633071393 FHDLLSQLDDQYSR ddPTM_KYSE-520_SHP099_60min_R1 1 FHDLLSQLDDQYSR 14 0 J3KPM9;A0A669KBI6;A0A669KB68;A0A669KB56;A0A669KBA4;A0A669KB53;P42224-2;P42224;A0A669KB75;A0A669KB52;E7ENM1;D2KFR9;A0A669KB17;E7EPD2 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta 0 125.36 0.00011551 235890000.0 163020.0 180640.0 115150.0 142510.0 193940.0 159110.0 138170.0 139460.0 125640.0 138480.0 False True 153976.95562768666 171961.7832538323 122572.75324651423 156054.10755280606 209201.97463234645 158116.9354711422 152137.57200925125 138976.24581020867 102826.94312665823 137253.17493580963 1.1218462210415052 1.2528801853527625 0.8930412961582774 1.136979946917725 1.524204993656327 1.15200931085995 1.1084448289112636 1.0125539600464972 0.7491771550985847 1.0 17.066479996426263 -7.341616111065589 2.3447482648498372 0.877441051938285 1.179659270872798 0.36239351577955614 0.15794614929527886 0.35586833812206325 3.6891046060830432 0.11892725149289468 0.04685485642836332 4.553904187062427e-08 7.341616111065589 0.30221821893451295 FHDT(ph)SSPLLISGTSAAELPWAVKPEDK ddPTM_KYSE-520_SHP099_60min_R1 2 FHDTSSPLLISGTSAAELPWAVKPEDK 27 1 P42566;B1AUU8 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 FHDT(0.333)S(0.333)S(0.333)PLLISGTSAAELPWAVKPEDK;FHDT(0.371)S(0.314)S(0.314)PLLISGTSAAELPWAVKPEDK 107.17 0.000388 1775950000.0 420225.0 533040.0 422359.0 826706.0 409615.0 358876.0 428150.0 390624.0 585315.0 373125.0 True False 396914.28155223094 507431.95829064806 449584.9369382936 905275.8896817785 441849.3701094587 356636.1217657068 471431.5803413249 389269.01651632704 479036.5505904168 369819.40278685733 1.073265162836763 1.372107451547378 1.2156878020740534 2.447886408500658 1.1947706550273007 0.9643521109984902 1.2747616182080934 1.0525921938732872 1.2953256291598794 1.0 18.496461392986518 -5.972521421575387 24.99977023313002 1.1248642465577445 1.53483065106631 0.23108255640600406 0.3568121766796229 334.2157345230857 304065.09482452937 0.11286054817918807 0.1279693976313275 1.0653163156441755e-06 5.972521421575387 0.40996640450856536 FHDTS(ph)SPLLISGTSAAELPWAVKPEDK ddPTM_KYSE-520_SHP099_60min_R1 2 FHDTSSPLLISGTSAAELPWAVKPEDK 27 1 P42566;B1AUU8 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 FHDT(0.055)S(0.473)S(0.473)PLLISGTSAAELPWAVKPEDK;FHDT(0.089)S(0.455)S(0.455)PLLISGTSAAELPWAVKPEDK 182.07 1.508e-13 1402000000.0 741590.0 868920.0 748400.0 1422540.0 654450.0 680700.0 670940.0 704650.0 957060.0 740050.0 True False 700452.5243769867 827175.7789244904 796643.0614823385 1557737.7738977524 705951.4916888674 676451.4988071562 738765.1629433816 702205.7336165465 783282.0295192568 733493.7327501877 0.9549536595911798 1.1277203089698502 1.0860938899850943 2.1237233589673825 0.9624506115982036 0.9222321454211267 1.007186741969054 0.957343876659547 1.0678782851796034 1.0 19.484425113452243 FHDTSS(ph)PLMVTPPSAEAHWAVR ddPTM_KYSE-520_SHP099_60min_R1 4 FHDTSSPLMVTPPSAEAHWAVR 22 0 Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4 Q9UBC2-3 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 FHDT(0.009)S(0.051)S(0.94)PLMVTPPSAEAHWAVR;FHDT(0.048)S(0.188)S(0.763)PLMVTPPSAEAHWAVR;FHDT(0.001)S(0.18)S(0.82)PLMVTPPSAEAHWAVR;FHDT(0.029)S(0.232)S(0.738)PLMVTPPSAEAHWAVR 219.64 2.4091999999999997e-19 2861910000.0 170513.0 369846.0 503952.0 927887.0 216468.0 276759.0 260792.0 199587.0 266295.0 273432.0 True False 161054.30398076176 352078.04300983605 536437.55227171 1016073.1015006019 233502.80006556015 275031.6444224618 287155.40044464514 198894.67928095613 217942.54075066437 271009.605206877 0.5942752614167305 1.2991349245392056 1.9794042054790524 3.749214352476458 0.8616034102825035 1.014840947104124 1.0595764686105613 0.7339026937038949 0.8041875142554319 1.0 18.047984459369303 FHEHWR ddPTM_KYSE-520_SHP099_60min_R1 1 FHEHWR 6 0 H7C1D4;E9PGT1;Q15631;Q15631-2 H7C1D4 TSN Translin 0 83.229 0.033756 58223000.0 30260.0 32426.0 28006.0 33271.0 32103.0 28396.0 31073.0 28090.0 30120.0 17394.0 False True 28581.41747818551 30868.20628758172 29811.311571184353 36433.065836709095 34629.323458916224 28218.77003103861 34214.162083255884 27992.562346255294 24650.967263410894 17239.902692327232 1.6578641995993353 1.7905093107816603 1.7292041668223646 2.113298809564856 2.0086727910783573 1.6368288461162612 1.9845913688644654 1.623707676651425 1.4298785615757577 1.0 14.073464010954817 -7.9508416908074055 1.441961447271956 1.0052165580884644 1.8503704979165243 0.7568435585376483 0.15042807779785788 0.1979943149427942 0.9268169417758582 0.1469622398503416 0.044134158423626946 1.1198460157793566e-08 7.9508416908074055 0.8451539398280599 FHFPPLDT(ph)HSPTNDVQPGR ddPTM_KYSE-520_SHP099_60min_R1 2 FHFPPLDTHSPTNDVQPGR 19 0 P41162 P41162 ETV3 ETS translocation variant 3 1 FHFPPLDT(0.676)HS(0.323)PT(0.001)NDVQPGR;FHFPPLDT(0.495)HS(0.495)PT(0.01)NDVQPGR 148.75 2.1587e-06 1950090000.0 315140.0 403320.0 323720.0 363700.0 377040.0 408830.0 457620.0 539520.0 558430.0 537640.0 True False 297658.5559839847 383943.90180433815 344587.5091703135 398265.9386496076 406710.9029358551 406278.34032221197 503880.6955408094 537648.5310449145 457033.18887471943 532876.9278775905 0.5585878097022079 0.7205114008849255 0.6466549612924322 0.7473882200827712 0.7632360900963654 0.7624243405327917 0.9455854986023302 1.008954418774198 0.8576711900345336 1.0 19.023442844113536 -6.2506053342179575 0.5886833519011739 0.9904042605653663 0.6148897966141098 0.8174807214544773 0.0606920133798014 0.3546057744843371 0.267354106686941 0.049931502980298845 0.05778534627207272 5.615580609834608e-07 6.2506053342179575 -0.37551446395125654 FHFPPLDTHS(ph)PTNDVQPGR ddPTM_KYSE-520_SHP099_60min_R1 5 FHFPPLDTHSPTNDVQPGR 19 0 P41162 P41162 ETV3 ETS translocation variant 3 1 FHFPPLDT(0.051)HS(0.945)PT(0.004)NDVQPGR;FHFPPLDT(0.002)HS(0.992)PT(0.005)NDVQPGR;FHFPPLDT(0.386)HS(0.598)PT(0.015)NDVQPGR;FHFPPLDT(0.027)HS(0.971)PT(0.002)NDVQPGR;FHFPPLDTHS(0.997)PT(0.002)NDVQPGR 253.93 4.8896e-27 3710310000.0 2116430.0 2695430.0 2239250.0 2217380.0 2983560.0 3210240.0 3343150.0 3625860.0 4277120.0 3627190.0 True False 1999027.408901395 2565937.496877086 2383595.637926679 2428119.1285203923 3218349.19786575 3190203.701381935 3681108.2279997705 3613282.7379420875 3500502.825420982 3595055.9185111187 0.5560490446360806 0.7137406357617272 0.6630204625339563 0.675405107335852 0.8952153376236271 0.8873863922270082 1.0239362923523843 1.0050699682686763 0.9736991314646101 1.0 21.777582780247794 -5.915574239160464 1.1814606886964 1.000375361100636 0.632784958252041 0.9137121923887686 0.047803250321432095 0.12141396588604532 0.3582264707992311 0.02046070055012892 0.025564271046444702 1.2145789801836653e-06 5.915574239160464 -0.3675904028485951 FHGILDQGEGVLIIFDEPPVDK ddPTM_KYSE-520_SHP099_60min_R1 1 FHGILDQGEGVLIIFDEPPVDK 22 0 O00231 O00231 PSMD11 26S proteasome non-ATPase regulatory subunit 11 0 123.18 0.00015777 36233000.0 55269.0 44148.0 33526.0 74915.0 53047.0 40396.0 46483.0 51716.0 44411.0 32734.0 False True 52203.11839398 42027.063812501015 35687.1396034966 82034.89907598386 57221.49710385722 40143.87357986465 51181.95527036278 51536.609266605155 36347.08191020392 32444.002226666646 1.609022155443966 1.2953723624749902 1.0999610761388843 2.528507380281125 1.7637003198336993 1.2373280367632715 1.5775475205797784 1.5884787858954637 1.1203020409217337 1.0 14.985664178032373 -7.820107144138239 3.8957087308954828 1.008368844138614 1.5887615438560394 0.24819635678994012 0.3693876521821915 0.32844851921387697 9.332388293470318 0.36512030640769944 0.09914060322485235 1.513187886075469e-08 7.820107144138239 0.5803926997174254 FHKPGENYK ddPTM_KYSE-520_SHP099_60min_R1 2 FHKPGENYK 9 1 P47897;A0A1B0GVU9;P47897-2;B4DDN1;A0A0U1RQT0;C9J165;A0A0U1RQJ6;A0A0U1RR66 P47897 QARS Glutamine--tRNA ligase 0 ; 160.36 0.00014199 2891500000.0 2787300.0 2663790.0 1946680.0 1772870.0 3058700.0 3013600.0 2174960.0 2560400.0 2475970.0 1820760.0 False True 2632682.912655204 2535817.5299696964 2072166.1075981278 1941363.031767199 3299402.2883776273 2994791.004561839 2394826.1823640526 2551518.570001851 2026396.262124421 1804629.482929843 1.4588495519761784 1.4051735017942624 1.1482501683580693 1.0757682117746226 1.8282990051902501 1.6595046423046083 1.3270459144200706 1.4138739248897907 1.1228877070292216 1.0 20.783271230253394 -7.866381808844172 3.040682282213666 1.0013860066565015 1.4152839788181069 0.32530483190666126 0.20677126683269398 0.3095922411936167 5.458003883741574 0.215298779150008 0.05843517294087755 1.3602482979533502e-08 7.866381808844172 0.4138979721616054 FHNWFDDR ddPTM_KYSE-520_SHP099_60min_R1 1 FHNWFDDR 8 0 A0A0C4DH80;E9PN73;E9PI32;P46977 A0A0C4DH80 STT3A Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A 0 155.07 0.00053314 683860000.0 423870.0 494990.0 310110.0 378030.0 577660.0 604870.0 421290.0 584120.0 578360.0 428080.0 False True 400357.0861361039 471209.93740486226 330100.18679354346 413957.857541136 623118.5555642002 601094.7819648659 463878.10459417675 582093.8240546322 473344.40326913487 424287.5442412004 0.9435984901515458 1.1105910220569362 0.778010552687559 0.9756540420753145 1.4686232580279748 1.4167155980029278 1.0933106825555778 1.3719323886720596 1.1156217279856004 1.0 18.69468280066099 -5.654553270961259 8.373003251564752 1.2635692281160498 0.9474377296480975 0.4456775005964938 0.15909751604182032 0.22021146903042066 15.740911525490255 0.046244205419408616 0.0597086215227316 2.2153723400340482e-06 5.654553270961259 -0.3161314984679523 FHQLDIDDLQSIR ddPTM_KYSE-520_SHP099_60min_R1 4 FHQLDIDDLQSIR 13 0 E9PQ63;A8MTM1;P16152-2;P16152;O75828 E9PQ63 CBR1;CBR3 Carbonyl reductase [NADPH] 1;Carbonyl reductase [NADPH] 3 0 ;;; 219.35 3.8144e-11 1029130000.0 1270923.0 1303591.0 822930.0 862609.0 1331148.0 1282500.0 957442.0 999737.0 1060656.0 1100428.0 False True 1200422.367667812 1240964.5316300178 875977.3845345541 944591.100007147 1435901.77440393 1274495.441780779 1054229.5810934477 996269.1456873701 868067.6073618972 1090679.0640400285 1.100619244694474 1.1377907328974581 0.8031486194388024 0.8660577901882969 1.3165208921175657 1.1685338829736667 0.9665809272880267 0.913439322835307 0.7958964611885487 1.0 20.056795215593638 -6.985310214101512 6.462598979275917 0.8997478987512846 1.060167441824333 0.20534548428869648 0.14489245355070116 0.27432254974063075 47.79771209713784 0.06916882650474868 0.0448039381189707 1.034403034472318e-07 6.985310214101512 0.1604195430730484 FHS(ph)LPFSLTK ddPTM_KYSE-520_SHP099_60min_R1 1 FHSLPFSLTK 10 0 J3KRR7;Q9NQC7-2;Q9NQC7 J3KRR7 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD 1 FHS(0.998)LPFS(0.002)LT(0.001)K 150.46 0.00011822 0.0 438160.0 505130.0 452910.0 621330.0 509290.0 460190.0 461050.0 487110.0 591500.0 403770.0 True False 413854.3913496953 480862.7965844127 482105.30328162137 680381.0163903233 549368.2255362872 457317.7835111866 507657.4334143825 485420.32910232915 484098.51050157886 400192.91192830633 1.0341372348539655 1.2015774948821636 1.2046822642575674 1.7001326013295608 1.3727585101125062 1.1427433367263489 1.2685317962486258 1.2129658338108975 1.2096628802568699 1.0 18.610336089415497 -8.298284275051227 0.7730453935924767 1.0001962928644388 1.2901231639411086 0.19309715494428292 0.16653186491302294 1.9563118248516411 2.298114606241229 0.18118982422923469 0.06440051444699865 5.031711414965994e-09 8.298284275051227 0.2899268710766698 FHS(ph)PHQEPTVVNQIVPLSGER ddPTM_KYSE-520_SHP099_60min_R1 1 FHSPHQEPTVVNQIVPLSGER 21 0 D6RAF2;Q6PIY7-2;Q6PIY7 D6RAF2 PAPD4 Poly(A) RNA polymerase GLD2 1 FHS(0.857)PHQEPT(0.143)VVNQIVPLSGER 139.19 1.2104999999999999e-06 656670000.0 118610.0 138740.0 102990.0 130070.0 113950.0 129910.0 132300.0 106190.0 128360.0 130330.0 True False 112030.466856827 132074.72214701437 109628.9001898262 142431.81369302855 122917.21671318873 129099.18350233213 145674.17512357194 105821.65167493222 105053.05969227837 129175.37759520579 0.8672741581440896 1.022445024785561 0.8486826377498041 1.1026235521398218 0.9515529894433277 0.9994101500278758 1.1277240123893277 0.8192091530519333 0.8132591647727245 1.0 16.978971575377326 -7.2969997479845095 24.995410885018696 0.8621756017125235 0.987840515171634 0.21396417181270322 0.09619061114761154 838.422383511163 589323.4993718188 0.05042296614130845 0.024223827387099856 5.0466159041206007e-08 7.2969997479845095 0.12566491345911046 FHS(ph)PSTTWS(ph)PNK ddPTM_KYSE-520_SHP099_60min_R1 1 FHSPSTTWSPNK 12 0 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 2 FHS(0.656)PS(0.336)T(0.122)T(0.049)WS(0.838)PNK 72.797 0.013382 308280000.0 389840.0 341890.0 329810.0 361760.0 388590.0 366570.0 359400.0 362920.0 430130.0 390380.0 True False 368214.79807322717 325465.09121264727 351070.0803146582 396141.56163289 419169.82222534454 364282.10065776284 395731.65940598486 361661.11522616516 352029.23469491804 386921.53691104415 0.9516523712090036 0.841165611537085 0.9073417910964505 1.0238291845821073 1.0833458007319827 0.9414883016489044 1.022769790912327 0.9347143560770913 0.9098207287847404 1.0 18.561681509059238 -5.15549638401963 5.851231040128638 0.9885487250336644 0.8917447377369631 0.35786910843459974 0.05391388130243039 0.2504170705496085 11.652073428724592 0.015292181212929318 0.02691825749308122 6.990425570377267e-06 5.15549638401963 -0.09680398729670137 FHS(ph)PSTTWS(ph)PNKDTPQEK ddPTM_KYSE-520_SHP099_60min_R1 5 FHSPSTTWSPNKDTPQEK 18 1 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 2 FHS(0.991)PS(0.009)T(0.003)T(0.002)WS(0.996)PNKDTPQEK;FHS(0.817)PS(0.1)T(0.111)T(0.116)WS(0.856)PNKDTPQEK;FHS(0.975)PS(0.025)TTWS(1)PNKDTPQEK;FHS(0.932)PS(0.063)T(0.004)TWS(1)PNKDTPQEK;FHS(0.995)PS(0.005)TTWS(1)PNKDTPQEK 227.87 1.1399e-18 33102300000.0 14456220.0 14314840.0 13728220.0 16888900.0 14981750.0 14265590.0 13389100.0 15120520.0 17662700.0 14441640.0 True False 13654304.658839889 13627133.599387117 14613163.027128642 18494015.97816708 16160728.49050302 14176553.161258075 14742600.893023584 15068070.44527589 14455598.920433212 14313698.305025915 0.953932685170925 0.9520344294669305 1.020921547717516 1.2920501455359965 1.129039340226178 0.9904186087449053 1.0299644842903437 1.0527028112633263 1.0099136234663737 1.0 23.770893141096334 -4.99913022352498 21.530724250487847 1.077975482817004 0.961356713408918 0.24101205810937598 0.08360625733202275 7.711217416884744 190705.80449554723 0.023877572494064355 0.04875987659716889 1.0020047411575278e-05 4.99913022352498 -0.11661876940808602 FHS(ph)PSTTWSPNK ddPTM_KYSE-520_SHP099_60min_R1 2 FHSPSTTWSPNK 12 0 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 FHS(0.925)PS(0.06)T(0.008)T(0.008)WSPNK;FHS(0.545)PS(0.163)T(0.144)T(0.144)WS(0.005)PNK 151.68 3.8290999999999996e-05 306510000.0 594390.0 704000.0 651860.0 1030820.0 690060.0 638410.0 794250.0 798620.0 873440.0 724170.0 True False 561418.0018129111 670178.783274457 693879.9386128777 1128788.8228726669 744363.7960956824 634425.4463838339 874540.5411330078 795849.7736193086 714845.3136305979 717754.4171957352 0.7821867596529325 0.9337159998162657 0.9667372599723804 1.5726671906567182 1.0370730966782622 0.8839032281578045 1.2184397896843822 1.1088051212957934 0.9959469374267272 1.0 19.453130778513327 -5.010772480859343 24.60316956789864 1.1245435186237542 0.881020042994964 0.256375938594365 0.1788940767356106 590.1979984872303 1347959.8162620533 0.0490271158066159 0.09251775333363045 9.755005512334372e-06 5.010772480859343 -0.2435234756287903 FHS(ph)PSTTWSPNKDTPQEK ddPTM_KYSE-520_SHP099_60min_R1 1 FHSPSTTWSPNKDTPQEK 18 1 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 FHS(0.899)PS(0.1)T(0.001)TWSPNKDTPQEK 157.12 3.9405e-07 1034000000.0 609300.0 891190.0 668780.0 957930.0 750080.0 596990.0 504010.0 606630.0 979760.0 631360.0 True False 575500.914390563 848375.8946965383 711890.6288858337 1048971.379187843 809107.0286285977 593263.9639678036 554960.2494635787 604525.7421185065 801860.2817396894 625766.6415906469 0.9196733672598582 1.3557384467475562 1.1376295596011106 1.6762980150578892 1.292985235793194 0.9480594274884577 0.886848567147836 0.9660561972141118 1.2814046458299966 1.0 19.255265227783184 -6.253433436304583 23.068476334614843 1.0062507031685188 1.2953689321469797 0.2891362500386445 0.20243356158562578 261.79898993913787 754351.9984987687 0.0684344182005163 0.06712615150249447 5.579131061340206e-07 6.253433436304583 0.28911822897846085 FHS(ph)QLMRLMVAKEARNVTMETE ddPTM_KYSE-520_SHP099_60min_R1 1 FHSQLMRLMVAKEARNVTMETE 22 3 P49458 P49458 SRP9 Signal recognition particle 9 kDa protein 1 FHS(0.999)QLMRLMVAKEARNVT(0.001)MET(0.001)E 42.172 0.048899 1004000000.0 727180.0 733420.0 567940.0 954900.0 608320.0 633950.0 655650.0 658230.0 745760.0 680400.0 True False 686841.8758026096 698185.4023141366 604550.3211361289 1045653.4088988458 656191.3231326644 629993.2828981879 721929.5005273612 655946.7537620371 610348.7830797257 674372.1853431906 1.018490813723394 1.0353116832047684 0.8964639026867203 1.5505583291023617 0.9730403142275599 0.9341922703671147 1.0705208729211875 0.9726776519233564 0.9050622139303045 1.0 19.363185507610375 FHSLPFS(ph)LTK ddPTM_KYSE-520_SHP099_60min_R1 1 FHSLPFSLTK 10 0 J3KRR7;Q9NQC7-2;Q9NQC7 J3KRR7 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD 1 FHS(0.29)LPFS(0.689)LT(0.021)K 82.417 0.007751300000000001 331760000.0 267390.0 312600.0 317450.0 381160.0 307480.0 282560.0 301280.0 333330.0 345990.0 308770.0 True False 252557.34367125024 297582.2267778339 337913.33493795875 417385.3318000675 331676.92667811626 280796.43822968967 331736.3226094465 332173.756029807 283166.93769812514 306034.5380194252 0.8252576500212517 0.972381185155465 1.10416731760031 1.3638504153853852 1.0837891985154415 0.9175318578318975 1.0839832809602357 1.085412640610919 0.9252777138512107 1.0 18.22333495420945 -9.653264055104412 13.876895993391667 0.9999999907883799 1.049884402231059 0.003105722424266988 0.13950045377860748 0.0 0.0 0.1438617134838987 0.03489159059861523 2.2219585083244558e-10 9.653264055104412 0.04988441144267908 FHSPS(ph)TTWSPNK ddPTM_KYSE-520_SHP099_60min_R1 2 FHSPSTTWSPNK 12 0 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 FHS(0.26)PS(0.458)T(0.138)T(0.138)WS(0.005)PNK;FHS(0.298)PS(0.506)T(0.096)T(0.096)WS(0.003)PNK 79.492 0.010989 397970000.0 558140.0 616920.0 498250.0 846500.0 667260.0 643420.0 576120.0 744720.0 766990.0 663370.0 True False 527178.861575495 587282.237184202 530367.9922281866 926951.1054904948 719769.5658099379 639404.1771154688 634359.8319893595 742136.7401389553 627723.9502444739 657493.0578940505 0.8018014110507087 0.8932143543313845 0.806651851088671 1.4098264527073763 1.0947181223712976 0.9724881037732621 0.9648160149724063 1.128736997643775 0.9547233126005512 1.0 19.326616136302285 FHSPSTT(ph)WS(ph)PNKDTPQEK ddPTM_KYSE-520_SHP099_60min_R1 2 FHSPSTTWSPNKDTPQEK 18 1 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 2 FHS(0.295)PS(0.251)T(0.273)T(0.297)WS(0.882)PNKDT(0.001)PQEK;FHS(0.255)PS(0.311)T(0.335)T(0.352)WS(0.747)PNKDTPQEK 70.453 0.013198 618860000.0 779810.0 858620.0 774280.0 1004090.0 847490.0 923220.0 733280.0 860100.0 1010870.0 842830.0 True False 736552.3847873048 817370.6063851058 824191.3276918015 1099518.4117093338 914182.6414415127 917457.8415289294 807407.0985231514 857116.5138488498 827321.4899589702 835363.1819118176 0.8817151638184798 0.9784613735482883 0.9866263507155676 1.3162160309638842 1.0943535233972228 1.098274213413655 0.9665342165012758 1.0260405682319484 0.9903734182604946 1.0 19.67204403349441 -9.978625424150461 13.548987955618163 1.0000038108273386 1.043596789803809 0.007705727073508473 0.11075225502605723 0.0 0.0 0.11446657400205719 0.027762222071356608 1.0504480418923492e-10 9.978625424150461 0.04359297897647041 FHSS(ph)DS(ph)EEEEHKK ddPTM_KYSE-520_SHP099_60min_R1 2 FHSSDSEEEEHKK 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 FHS(0.466)S(0.534)DS(1)EEEEHKK;FHS(0.455)S(0.545)DS(1)EEEEHKK 59.261 0.019469 994600000.0 772440.0 792300.0 798650.0 867620.0 786280.0 786870.0 788400.0 884790.0 934230.0 732340.0 True False 729591.2133790358 754236.718733455 850132.25688518 950078.3439405347 848155.7626787729 781958.8524553931 868099.1660425101 881720.8700015395 764597.3820217921 725852.0373518978 1.0051514300914268 1.0391053271478194 1.1712197708870387 1.308914620404834 1.168496772114978 1.0772978681828709 1.1959726244064395 1.214739126748604 1.053379122295017 1.0 19.469315963795225 -4.706691705037639 4.977055218344603 1.1620878723414143 1.0157595451239296 0.2562537597428609 0.08436174254225205 0.23311329424381524 11.831902932838451 0.021607100599264024 0.05879975996237294 1.9647545127759678e-05 4.706691705037639 -0.14632832721748468 FHT(ph)GKT(ph)PFVCTECGK ddPTM_KYSE-520_SHP099_60min_R1 3 FHTGKTPFVCTECGK 15 1 A0A1B0GUH8;Q6PF04-2;Q6PF04 A0A1B0GUH8 ZNF613 Zinc finger protein 613 2 FHT(0.666)GKT(0.777)PFVCT(0.557)ECGK;FHT(0.665)GKT(0.764)PFVCT(0.571)ECGK;FHT(0.622)GKT(0.755)PFVCT(0.622)ECGK 61.167 0.016513 711710000.0 521280.0 509420.0 538070.0 308300.0 512950.0 517130.0 478480.0 561430.0 666530.0 445520.0 True False 492363.5592540832 484946.69854499045 572754.8531424396 337600.73930622503 553316.2467137363 513902.3998503669 526849.4279147899 559482.530368747 545504.9538539593 441573.0394093148 1.1150217864584986 1.0982253336700445 1.2970784038550103 0.76454110458788 1.2530571328673024 1.163799312878807 1.1931195541728452 1.2670214900736643 1.2353674367974834 1.0 18.752292564356637 FHVEEEGK ddPTM_KYSE-520_SHP099_60min_R1 10 FHVEEEGK 8 0 P00558-2;P00558;P07205 P00558-2 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 0 ;;;;;;;;; 193.28 8.1839e-06 9282500000.0 22341240.0 20983340.0 14469950.0 13852270.0 21459350.0 21311780.0 16702910.0 19966400.0 18880380.0 19343430.0 False True 21101926.88104224 19975268.84976452 15402706.129738592 15168785.575963158 23148078.758000586 21178765.27581661 18391403.147492535 19897141.218592804 15452178.927647991 19172062.259160813 1.1006602521833193 1.0418946370894406 0.8033932876667379 0.7911921717610318 1.207385958020241 1.104668083669348 0.959281422044451 1.0378195600259712 0.8059737506988648 1.0 24.19250219428192 -8.322073881445592 0.0032237372269310343 0.07663480254998392 1.8820884975839465 0.005221605968214527 0.1362660284682454 363479.3158466622 573.7862719273776 161734.99081365802 159594.25700938381 4.763499440622217e-09 8.322073881445592 1.8054536950339626 FHVEEEGKGK ddPTM_KYSE-520_SHP099_60min_R1 6 FHVEEEGKGK 10 1 P00558-2;P00558 P00558-2 PGK1 Phosphoglycerate kinase 1 0 ;;;;; 174.41 3.1949e-05 5936340000.0 20397280.0 22263160.0 16483030.0 10898510.0 18776130.0 18127350.0 11023350.0 13876620.0 21183520.0 13494110.0 False True 19265802.217430387 21193604.37591555 17545552.48758049 11934301.113643494 20253704.609434005 18014210.484650936 12137697.795528559 13828485.244047461 17337126.76108269 13374562.68365871 1.440480909403468 1.5846203630874818 1.3118599017086348 0.8923133709803496 1.5143451855947678 1.34690089767653 0.9075210967726537 1.0339392450523532 1.2962761602863857 1.0 23.67298838380521 -1.0000000112512983 0.2395309345050794 1.0350848377006008 4.064304865186599 0.3187306040425759 0.19962751334077858 61.838440589599195 0.8251117584648385 0.2869819309404391 74.44192889721995 0.09999999740929286 1.0000000112512983 3.029220027485998 FIAY(ph)QFT(ph)DTVDYVEPS(ph)QNT(ph)ISLK ddPTM_KYSE-520_SHP099_60min_R1 1 FIAYQFTDTVDYVEPSQNTISLK 23 0 M0QYL9 M0QYL9 SUPT5H 4 FIAY(0.936)QFT(0.504)DT(0.511)VDY(0.056)VEPS(0.954)QNT(0.826)IS(0.213)LK 57.351000000000006 0.05674 0.0 18783.0 20997.0 16940.0 20730.0 18516.0 17342.0 18238.0 20755.0 22443.0 20323.0 True False 17741.069547017807 19988.27260286047 18031.979504958315 22700.172967298226 19973.10385837125 17233.76214531173 20081.67502572717 20683.00574925343 18367.916941989744 20142.95403105474 0.8807580814445634 0.9923208170978399 0.8952003503139658 1.1269535209334727 0.9915677624830186 0.8555727287438646 0.9969577945105224 1.0268109492463757 0.9118780151943756 1.0 14.297987654425278 -3.3948833908743485 1.5779345707475105 0.9791832812333046 2.525234747261128e-12 0.13340861577284624 0.07236855079123032 33.28176961380928 9.393757264646267 0.02017442302239833 95.57969208114888 0.0004028251793475139 3.3948833908743485 -0.9791832812307794 FICEQDHQNFLR ddPTM_KYSE-520_SHP099_60min_R1 4 FICEQDHQNFLR 12 0 Q92598-2;Q92598-3;Q92598;Q92598-4;A0A0A0MSM0 Q92598-2 HSPH1 Heat shock protein 105 kDa 0 ;;; 253.88 7.705199999999999e-16 2724100000.0 2919600.0 2709160.0 2676230.0 2207050.0 2567020.0 2869650.0 2766900.0 2925620.0 3281890.0 3157440.0 False True 2757643.9679216905 2579007.887067936 2848744.0679193973 2416807.3684262205 2769029.869654147 2851739.4499073816 3046605.254341736 2915471.7070648395 2685981.5057143294 3129467.5380511447 0.8811863150492991 0.8241043742137668 0.9102967304442576 0.7722743051462586 0.884824602263982 0.9112538843215748 0.9735219225948544 0.9316190922627146 0.8582870641908006 1.0 21.577485780616183 -6.204523074666153 3.0545743274010313 0.9346207787474643 0.8485870262190577 0.41938404630833714 0.04864709082835855 0.26461864939249913 4.909532216399373 0.016909984682394144 0.01635250055713324 6.244201730921961e-07 6.204523074666153 -0.08603375252840662 FICVTPTTCSNTIDLPMS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 FICVTPTTCSNTIDLPMSPR 20 0 G8JLH9;P40763-2;P40763 G8JLH9 STAT3 Signal transducer and activator of transcription;Signal transducer and activator of transcription 3 1 FICVTPTTCSNTIDLPMS(1)PR;FICVTPTTCSNTIDLPMS(1)PR 185.85 4.8656e-13 520560000.0 137790.0 159717.0 136011.0 125863.0 134211.0 155315.0 151870.0 199158.0 232440.0 192282.0 True False 130146.514022445 152043.95557989532 144778.48668529434 137824.9816779093 144772.6421438682 154345.62147382594 167222.50170836656 198467.16738182664 190234.75533556548 190578.53107313236 0.6829022833243622 0.7978021171836516 0.7596788886453177 0.7231925910113166 0.759648221280042 0.8098793741599234 0.877446692272997 1.0413931005988661 0.998196146566819 1.0 17.540026081308795 -6.922963567585826 1.7018550102775762 1.0196695112887515 0.7483155110685807 0.9230969797968545 0.033537280176520655 0.09041781560442756 0.522208392120891 0.0197598906895473 0.01051098186959624 1.1940882708158602e-07 6.922963567585826 -0.27135400022017075 FIDFFK ddPTM_KYSE-520_SHP099_60min_R1 2 FIDFFK 6 0 P49588;P49588-2 P49588 AARS Alanine--tRNA ligase, cytoplasmic 0 ; 126.68 0.057414 549780000.0 573570.0 541480.0 421230.0 382340.0 645570.0 612830.0 485700.0 423930.0 454310.0 411880.0 False True 541752.9287165527 515466.4880219499 448383.15979182936 418677.47864528693 696372.6862091566 609005.1006522543 534799.2959752002 422459.48577600607 371818.7562231144 408231.0636377911 1.3270742404777673 1.2626831565157546 1.0983562980147532 1.025589466206728 1.7058297328079457 1.4918146973563062 1.3100406696382827 1.0348538448089275 0.9108046627069417 1.0 18.63902644037206 -7.324327507493238 3.8313399470990808 0.9625690618502012 1.3182710663732493 0.4265789966833523 0.17952835765064135 0.2593188168243812 7.6062685278338815 0.11917317649871634 0.054004828376646115 4.7388448761449146e-08 7.324327507493238 0.3557020045230481 FIEFEDS(ph)QEQEKK ddPTM_KYSE-520_SHP099_60min_R1 6 FIEFEDSQEQEKK 13 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 FIEFEDS(1)QEQEKK;FIEFEDS(1)QEQEKK;FIEFEDS(1)QEQEKK;FIEFEDS(1)QEQEKK;FIEFEDS(1)QEQEKK;FIEFEDS(1)QEQEKK 199.08 7.8848e-09 3856860000.0 3848750.0 3377370.0 3315540.0 3278160.0 3702450.0 3352860.0 3219310.0 3582290.0 4341010.0 3461740.0 True False 3635252.165207092 3215116.0756642777 3529265.0134515655 3589715.340785259 3993811.750941171 3331933.5570597285 3544749.272237839 3569863.87210277 3552792.01195682 3431071.6767929653 1.0595092459872406 0.937058848817014 1.0286188532063492 1.0462373505821303 1.164012917000382 0.9711057858674927 1.033131804332088 1.0404515581089622 1.035475894015023 1.0 21.71022783415114 -4.986524117330782 24.887710956016374 1.044415552378309 0.9944227371897854 0.08760808673457288 0.05422521070637697 457.76539381996145 845404.8162389972 0.014010167986034093 0.029144695959655634 1.0315157955009746e-05 4.986524117330782 -0.04999281518852361 FIEIAAR ddPTM_KYSE-520_SHP099_60min_R1 2 FIEIAAR 7 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1;Q5RI18;A0A1W2PP35;A0A1W2PRZ7;A0A1W2PQ74;A0A1W2PQL0;A0A1W2PP34;A0A1W2PPL4;A0A1W2PPH7;A0A1W2PQD4;A0A1W2PPE9 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 105.12 0.043443 137370000.0 319607.0 362587.0 267647.0 220187.0 365333.0 346161.0 255452.0 309223.0 283749.0 301043.0 False True 301877.7625892411 345167.77626581694 284899.9538703411 241113.50627836466 394082.62863957376 344000.4807970964 281275.58113126777 308150.37758619105 232227.33433019865 298375.99322790967 1.0117360962034792 1.1568215409413523 0.9548353766273847 0.8080861455036499 1.3207584979484597 1.1529093781158768 0.9426883781377813 1.0327586152375716 0.7783043529001864 1.0 18.18677193816563 -7.298749684132823 2.025832127147987 0.9060993908470957 1.0611019124152332 0.14700795778921982 0.14333306450001346 0.6913030995248989 5.276000361639798 0.10923759175170548 0.04311686154867915 5.026322099780295e-08 7.298749684132823 0.15500252156813754 FIGELFK ddPTM_KYSE-520_SHP099_60min_R1 1 FIGELFK 7 0 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13;A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 Q04637-9;A0A0A0MSA7 EIF4G1;EIF4G3 Eukaryotic translation initiation factor 4 gamma 1;Eukaryotic translation initiation factor 4 gamma 3 0 89.369 0.057645 235920000.0 452680.0 443770.0 348490.0 304100.0 461220.0 416170.0 339460.0 341500.0 351050.0 328160.0 False True 427568.9380047922 422450.62308764947 370954.2230037148 333001.57256900094 497515.3900171738 413572.52865957667 373775.92961033864 340315.41620669945 287308.16925034544 325252.757704617 1.3145743667855236 1.2988379439700375 1.1405106158718639 1.0238239789850487 1.5296269692784576 1.271541958869934 1.149186043027462 1.0463106250301553 0.8833381499297495 1.0 18.31120176353948 -7.230853422301624 2.1133003314104735 0.9489992454384728 1.2582503319641078 0.5135908638412765 0.12592609910651614 0.2943834856987884 2.487921727869258 0.09082738589467801 0.03875968806332481 5.8768766812946263e-08 7.230853422301624 0.30925108652563504 FIGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 FIGSPR 6 0 P23443-3;P23443-5;P23443-2;P23443;K7ERJ3;P23443-4 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 FIGS(1)PR;FIGS(1)PR;FIGS(1)PR;FIGS(1)PR 98.523 0.012673 4022970000.0 3335480.0 3199210.0 3051370.0 2958860.0 3312350.0 3317730.0 3199770.0 3170490.0 3868640.0 3189670.0 True False 3150454.2752854642 3045515.1494878912 3248066.1925646192 3240069.1647863057 3573013.1003065445 3297022.816420545 3523233.9783458216 3159492.3101879302 3166192.4964781525 3161412.005325707 0.9965339126878169 0.9633401607754458 1.0274099633622364 1.0248803886769877 1.130195334960282 1.042895646270207 1.1144494840946355 0.9993927728703051 1.001512137976446 1.0 21.59213763345194 -5.00737799885365 2.4941924258498003 1.0511991589520746 0.9801440320898037 0.23780535599491615 0.04415695524346688 0.3808343987264677 4.708712167021002 0.012816725400629628 0.030286752561947038 9.83155020173375e-06 5.00737799885365 -0.07105512686227089 FIHQQPQS(ph)SSPVYGSSAK ddPTM_KYSE-520_SHP099_60min_R1 1 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 FIHQQPQS(0.531)S(0.432)S(0.037)PVYGSSAK 300.12 2.4964e-38 7233300000.0 1169600.0 1089500.0 1013200.0 1275900.0 1007300.0 1020300.0 1122400.0 1054000.0 1387500.0 1093800.0 True False 1104719.9564602044 1037158.7846271587 1078512.4931773178 1397161.1523866765 1086568.7792469945 1013931.9292389306 1235863.1455683843 1050343.9200054489 1135564.9760286412 1084109.7829635234 1.0190111498120984 0.9566916569943503 0.9948369714265424 1.2887635314639405 1.002268217040482 0.9352668384443921 1.139979700386088 0.96885383428072 1.0474630834198912 1.0 20.04807942870728 -9.235374714949668 14.276731780083827 1.0000005693232659 1.0395901666412557 0.013818525681758675 0.09940112061875535 0.0 0.0 0.09763310293393389 0.023679505644318297 5.816011881239368e-10 9.235374714949668 0.03958959731798983 FIHQQPQSS(ph)SPVYGSSAK ddPTM_KYSE-520_SHP099_60min_R1 2 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 FIHQQPQS(0.032)S(0.912)S(0.056)PVYGSSAK;FIHQQPQS(0.161)S(0.767)S(0.072)PVYGSSAK 295.61 4.4318999999999995e-38 9908800000.0 4750800.0 4957500.0 4784100.0 5957000.0 4359400.0 4443100.0 4851900.0 4740000.0 5919000.0 4787700.0 True False 4487263.653514993 4719334.258640793 5092490.740830647 6523151.4889626345 4702459.978406984 4415368.964815742 5342377.4019807875 4723558.046324317 4844258.805847581 4745284.702774233 0.9456258021550544 0.9945313198767044 1.0731686420950521 1.3746596669213562 0.9909753097970682 0.9304750381435254 1.1258286354994624 0.9954214219355029 1.020857358256183 1.0 22.178063216519707 FIHQQPQSSS(ph)PVYGSSAK ddPTM_KYSE-520_SHP099_60min_R1 3 FIHQQPQSSSPVYGSSAK 18 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 FIHQQPQS(0.416)S(0.021)S(0.563)PVYGSSAK;FIHQQPQS(0.05)S(0.101)S(0.849)PVYGSSAK;FIHQQPQS(0.014)S(0.422)S(0.564)PVYGSSAK 204.21 2.3086e-13 3463440000.0 3189020.0 3587510.0 3042840.0 3894000.0 3198770.0 3177790.0 3485810.0 3356470.0 4157900.0 3333590.0 True False 3012118.7034462364 3415160.634637703 3238986.3351161364 4264084.5892262105 3450495.000488348 3157956.233868651 3838189.693027203 3344827.1889759833 3402930.172129352 3304056.9860937716 0.9116424795709471 1.0336264322956743 0.9803058327227687 1.290560243716448 1.044320668502665 0.955781406664584 1.1616596533236283 1.0123394369569916 1.029924782306032 1.0 21.65580713890414 -4.24472527281853 1.707851789766326 1.0675729431729193 0.8575876268685003 0.1833427377297855 0.09356521992568946 1.7004421789718762 4.734281782989319 0.025965812031971024 0.5927561864196665 5.6921289121430796e-05 4.24472527281853 -0.20998531630441897 FIIGS(ph)VSEDNSEDEISNLVK ddPTM_KYSE-520_SHP099_60min_R1 1 FIIGSVSEDNSEDEISNLVK 20 0 A0A087X2F8;A0A087X126;A0A087WYK6;A0A0C4DGT1;Q13085;Q13085-4 A0A087X2F8 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase 1 FIIGS(0.405)VS(0.328)EDNS(0.267)EDEISNLVK 102.58 0.00013447 25199000.0 27571.0 29190.0 24277.0 20573.0 25742.0 25648.0 18199.0 25962.0 32528.0 25981.0 True False 26041.58166857412 27787.66858491674 25841.934264573407 22528.251734501995 27767.74894805534 25487.921318357454 20038.73252512387 25871.94388157635 26621.735164151047 25750.828552912124 1.0112910198234812 1.0790980386444409 1.0035379720490967 0.8748554124466922 1.0783244854043785 0.989790338822906 0.7781781655665491 1.0047033565702697 1.033820527733677 1.0 14.652331232425755 -6.538399201846847 24.976452884559375 0.9444841754264711 1.0083463910427326 0.08393165469297215 0.08372657388351293 574.3828297047008 924323.2274020468 0.032919815546944634 0.02550732317714191 2.8946815840619756e-07 6.538399201846847 0.06386221561626149 FIIGSVSEDNS(ph)EDEISNLVK ddPTM_KYSE-520_SHP099_60min_R1 5 FIIGSVSEDNSEDEISNLVK 20 0 A0A087X2F8;A0A087X126;A0A087WYK6;A0A0C4DGT1;Q13085;Q13085-4 A0A087X2F8 ACACA Acetyl-CoA carboxylase 1;Biotin carboxylase 1 FIIGS(0.014)VS(0.063)EDNS(0.923)EDEISNLVK;FIIGSVS(0.001)EDNS(0.999)EDEISNLVK;FIIGSVS(0.002)EDNS(0.998)EDEISNLVK;FIIGSVS(0.001)EDNS(0.999)EDEISNLVK;FIIGS(0.001)VS(0.01)EDNS(0.988)EDEISNLVK 193.42 3.1814e-13 772746000.0 647354.0 667833.0 547125.0 485900.0 572640.0 635642.0 504898.0 586139.0 743869.0 645873.0 True False 611443.9831517951 635749.30024223 582393.5529309518 532079.7899088382 617703.5101240932 631674.7224985722 555938.0171696246 584105.8206148711 608801.1410114946 640151.0677015905 0.9551557655712959 0.9931238614110811 0.9097751801336328 0.8311784776353287 0.9649339683864101 0.9867588361080895 0.8684481604719868 0.9124499670242757 0.9510272992238297 1.0 19.288052877839743 FIIPQIVK ddPTM_KYSE-520_SHP099_60min_R1 2 FIIPQIVK 8 0 A0A5F9ZHM4;P07195;C9J7H8;A8MW50;A0A3B3IS95 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 ; 151.51 0.0029337 784760000.0 1974940.0 2786500.0 1799600.0 1430640.0 2455300.0 2725600.0 1724930.0 1919940.0 1815800.0 1838670.0 False True 1865386.1412547177 2652632.357378226 1915605.0954618042 1566607.5954624005 2648518.1412539934 2708588.5193900163 1899302.7580945063 1913280.1762573635 1486096.4925930123 1822380.8142636134 1.0235984305006425 1.4555861961541225 1.0511552143594427 0.8596488632895504 1.453328591106906 1.486291173716346 1.0422095882643363 1.0498794550964807 0.8154697859862585 1.0 20.797393033098047 -6.984351007848829 24.92116899073199 0.9688136004813395 1.222376909983718 0.26689811194961477 0.20219692562793806 336.68557164341274 536173.7279828084 0.08914230167501119 0.06007901524204082 1.0366901977375958e-07 6.984351007848829 0.2535633095023786 FIKDNWEELYNR ddPTM_KYSE-520_SHP099_60min_R1 3 FIKDNWEELYNR 12 1 E9PLK3;P55786-2;P55786;H0YDG0 E9PLK3 NPEPPS Puromycin-sensitive aminopeptidase 0 ;; 166.62 3.0459e-06 1083513000.0 1358070.0 1223580.0 752530.0 668260.0 1203270.0 1035260.0 849240.0 767180.0 886510.0 801620.0 False True 1282735.149854575 1164797.3801689772 801039.2878905722 731771.2294803042 1297960.5033302212 1028798.5583298025 935089.4669836902 764518.8316411576 725542.1310984856 794518.2704509223 1.614481626868781 1.4660422843491139 1.0082075109939876 0.9210250496379314 1.6336446266913087 1.2948708627504768 1.1769263234852836 0.9622419774025602 0.9131849550630348 1.0 19.59972087007841 -4.624056359845312 4.894804782923086 1.1338171020429877 1.5803674561300627 0.4034744446340782 0.20918421618775937 0.2131901948706711 8.157850158914409 0.0583566983092163 0.16594140225196582 2.376531856136505e-05 4.624056359845312 0.446550354087075 FIKT(ph)PPGVSAPTEPLLCK ddPTM_KYSE-520_SHP099_60min_R1 1 FIKTPPGVSAPTEPLLCK 18 1 E7ETU5;F6Y5H0;P29558-2;P29558 E7ETU5 RBMS1 RNA-binding motif, single-stranded-interacting protein 1 1 FIKT(0.999)PPGVS(0.001)APTEPLLCK 80.156 0.017189 651560000.0 258310.0 293260.0 225300.0 187490.0 211220.0 330440.0 197920.0 230250.0 307920.0 306150.0 True False 243981.02937178116 279171.34940776543 239823.19849274572 205308.99322907627 227841.81232259527 328377.6013895054 217927.68511305648 229451.31649075384 252009.49003152316 303437.7491810958 0.8040562851201811 0.9200284083347592 0.7903538671110296 0.6766099266922292 0.750868383836502 1.082191000545305 0.7181956948375406 0.7561726156682442 0.8305146301395758 1.0 18.211041049700864 FINYVK ddPTM_KYSE-520_SHP099_60min_R1 2 FINYVK 6 0 P06748;P06748-2 P06748 NPM1 Nucleophosmin 0 ; 113.82 0.065683 5980200000.0 6271200.0 5870900.0 4413100.0 4125600.0 6152100.0 5610200.0 4685400.0 4931400.0 4786000.0 4468900.0 False True 5923324.034672731 5588853.151599435 4697575.487209659 4517695.783593134 6636235.269339263 5575184.660801978 5159045.957097389 4914294.124397411 3916983.045241854 4429309.022751589 1.3373020496531138 1.261788943352503 1.06056621091012 1.019954977263392 1.4982551985539 1.2587030239173838 1.1647518677512525 1.1094945281881772 0.8843327537369551 1.0 22.078650223589346 -7.46523121745394 2.245635880958959 0.9449531933802515 1.2298726793622943 0.4293513442908322 0.13075824671031866 0.33490445288090337 3.119915248056166 0.11190312155923465 0.03882725726595163 3.4258534627920995e-08 7.46523121745394 0.28491948598204275 FIPAPPSS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 3 FIPAPPSSPLR 11 0 H7C0K1;Q9H9A5-5;Q9H9A5-2;Q9H9A5;Q9H9A5-6 H7C0K1 CNOT10 CCR4-NOT transcription complex subunit 10 1 FIPAPPS(0.242)S(0.758)PLR;FIPAPPS(0.001)S(0.999)PLR;FIPAPPS(0.01)S(0.99)PLR 173.04 1.0168e-05 1737696000.0 1649460.0 1668850.0 1321890.0 1062650.0 1256360.0 1708590.0 1336100.0 1551310.0 1585210.0 1605780.0 True False 1557961.1656830094 1588675.9410050788 1407101.1444987806 1163643.9365026285 1355228.3842894416 1697926.0560407203 1471166.0270794006 1545928.8676884756 1297375.8238921526 1591554.038477934 0.9788930366278668 0.9981916432598119 0.884105164185595 0.7311369318100359 0.8515126420624084 1.0668353162953323 0.9243582005461372 0.9713329427173636 0.8151629115483157 1.0 20.602004711356507 FIPCS(ph)PFSDYVYK ddPTM_KYSE-520_SHP099_60min_R1 1 FIPCSPFSDYVYK 13 0 Q14195-2;Q14195 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 FIPCS(0.609)PFS(0.391)DYVYK 147.73 0.00019722 0.0 130990.0 127500.0 127580.0 99917.0 126190.0 115650.0 103250.0 134710.0 150940.0 122300.0 True False 123723.72357790866 121374.7086185982 135804.01093521752 109413.0816388586 136120.43507711528 114928.18545181066 113687.51762289356 134242.7224515503 123533.10088775706 121216.51714796014 1.0206837029221698 1.0013050323038482 1.1203424593486009 0.902625188490658 1.122952863849099 0.9481231448972108 0.9378880065009912 1.1074622964763954 1.0191111227603515 1.0 16.887226770474374 FIPHENGVHTIDVK ddPTM_KYSE-520_SHP099_60min_R1 2 FIPHENGVHTIDVK 14 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7 O75369-2 FLNB Filamin-B 0 ; 180.11 6.503299999999999e-09 899180000.0 852960.0 803160.0 569410.0 600070.0 887190.0 826440.0 624960.0 674560.0 681530.0 665100.0 False True 805644.6084663947 764574.9880322628 606115.0796882127 657100.4723823759 957006.8055794116 821281.8814076473 688137.0558218252 672220.1088034878 557781.3319731881 659207.7314399701 1.2221407153501502 1.1598392305899219 0.919459907371259 0.9968033459604742 1.4517530058225057 1.2458620283679671 1.0438849895140976 1.0197394186125421 0.8461389412936243 1.0 19.330373637535452 -7.18454033602727 2.423052132006491 0.9369446726339189 1.1576671164696013 0.30723381968174546 0.14171421901072478 0.43004378448414105 4.860874402406853 0.09651160909863815 0.045078177312809116 6.538222020516731e-08 7.18454033602727 0.2207224438356824 FIQELSGS(ph)SPKR ddPTM_KYSE-520_SHP099_60min_R1 2 FIQELSGSSPKR 12 1 I3L254;Q01664 I3L254 TFAP4 Transcription factor AP-4 1 FIQELS(0.015)GS(0.492)S(0.492)PKR;FIQELS(0.001)GS(0.862)S(0.137)PKR 143.81 5.6825e-05 328600000.0 1054960.0 1001050.0 935560.0 871180.0 925900.0 976470.0 866420.0 905090.0 1237690.0 915800.0 True False 996439.2657893791 952958.0553933163 995867.694548927 953976.6852701823 998763.0623496397 970375.4885268437 954006.1890443335 901950.4540395945 1012956.6956258635 907686.7244816185 1.0977788249116978 1.0498755018561634 1.0971491239090985 1.0509977281148406 1.1003389555135723 1.0690643174064565 1.0510302324727379 0.9936803411493101 1.1159761053069988 1.0 19.791834931620535 -13.999999999950157 0.12102639237254272 0.7776590687667141 1.099918525951817 0.28717485817774413 0.03360790643774046 192.2304397552056 1.5018710691858526 10.421890763981752 0.3045539476633509 1.0000000001147673e-14 13.999999999950157 0.32225945718510285 FIQELSGSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 14 FIQELSGSSPK 11 0 I3L254;Q01664 I3L254 TFAP4 Transcription factor AP-4 1 FIQELS(0.031)GS(0.238)S(0.731)PK;FIQELS(0.001)GS(0.029)S(0.97)PK;FIQELSGSS(1)PK;FIQELSGS(0.012)S(0.988)PK;FIQELSGS(0.004)S(0.996)PK;FIQELSGS(0.054)S(0.946)PK;FIQELSGS(0.001)S(0.999)PK;FIQELSGS(0.011)S(0.989)PK;FIQELSGS(0.137)S(0.863)PK;FIQELSGS(0.002)S(0.998)PK;FIQELSGSS(1)PK;FIQELSGS(0.003)S(0.997)PK;FIQELSGS(0.017)S(0.983)PK;FIQELSGS(0.001)S(0.999)PK 217.68 9.283800000000001e-10 22840133000.0 53905230.0 51223860.0 44031600.0 40862680.0 42342970.0 48590880.0 42287510.0 48007130.0 56793860.0 46909720.0 True False 50914999.43448812 48762988.8770186 46869947.38905093 44746256.82138726 45675120.84045679 48287606.29404819 46562344.19712622 47840604.47097835 46481526.68070194 46494136.3760099 1.0950843139170405 1.0487986803897145 1.0080829765285186 0.9624064518483129 0.9823845413767982 1.0385741097228702 1.0014670198530995 1.0289599549517217 0.999728789557333 1.0 25.470545445923364 -4.514487317863826 2.420524659214469 1.0026319943105724 1.09625540849151 0.6818153972077113 0.020182292606479933 0.21737495436675933 2.1843377652892504 0.0058837578926191755 0.03357750568507582 3.058529559462107e-05 4.514487317863826 0.09362341418093756 FIQELSGSS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 2 FIQELSGSSPKR 12 1 I3L254;Q01664 I3L254 TFAP4 Transcription factor AP-4 1 FIQELSGS(0.217)S(0.783)PKR;FIQELS(0.015)GS(0.433)S(0.552)PKR 129.29 4.825e-05 582410000.0 965450.0 903090.0 863300.0 721010.0 836530.0 835490.0 742840.0 797456.0 982440.0 744500.0 True False 911894.56392314 859704.2008342732 918949.6993288387 789534.5736204381 902360.151795382 830275.3970007203 817933.5166197595 794689.8112636294 804053.6612969933 737904.3092122346 1.235789725766275 1.1650619058615728 1.2453507695460988 1.0699687801841442 1.2228687927825164 1.1251803067624018 1.1084547229341455 1.0769551029076079 1.0896448919716675 1.0 19.49307421541645 -6.230249397076464 0.15610764776299454 0.93735565832988 1.3434322806909789 0.656374050068699 0.04526650509570168 5.590640456549435 0.38906723968760276 0.2939421438225188 0.6347476002641176 5.885056042549075e-07 6.230249397076464 0.40607662236109887 FISDKDASIVGFFDDSFSEAHSEFLK ddPTM_KYSE-520_SHP099_60min_R1 7 FISDKDASIVGFFDDSFSEAHSEFLK 26 1 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ;;;;;; 257.48 5.554099999999999e-38 720600000.0 487938.0 558274.0 462289.0 980632.0 615332.0 428505.0 435833.0 521421.0 560488.0 326729.6 False True 460871.1064597118 531453.6790536422 492088.8886285528 1073830.9704422378 663755.1276398413 425830.54134914116 479891.2529601793 519612.3122515767 458717.5079526775 323835.02993578225 1.4231663157352197 1.6411247392199404 1.5195665790885438 3.315981506556541 2.0496705614938153 1.314961329024797 1.4819003770387151 1.604558692599185 1.416516020652994 1.0 18.304899527962284 -6.257781981446786 24.31989918777281 1.4087667592350104 2.0180668054330386 0.26726944880701786 0.5147532030395612 346.96200292875477 2307130.8240335155 0.18583323499532453 0.17886227956690318 5.523546551933897e-07 6.257781981446786 0.6093000461980282 FISGT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 FISGTPR 7 0 Q9Y4B6;Q9Y4B6-2;Q9Y4B6-3 Q9Y4B6 VPRBP Protein VPRBP 1 FISGT(1)PR;FISGT(1)PR;FIS(0.001)GT(0.999)PR;FIS(0.001)GT(0.999)PR 108.81 0.015093 1816770000.0 3494520.0 3324830.0 3021720.0 2763230.0 2842540.0 2850340.0 2699610.0 2820770.0 3317150.0 3139500.0 True False 3300672.0094470903 3165100.1761284242 3216504.9061229415 3025846.5484046056 3066231.726159786 2832549.9707800625 2972512.9244546164 2810985.407242664 2714839.1785465972 3111686.4724940383 1.0607341191420159 1.0171655159048123 1.0336854096823227 0.972413697572612 0.9853922473436663 0.9102941430052733 0.9552739168069612 0.9033639578056976 0.8724655271488951 1.0 21.569265273811215 -5.5917244942623165 0.8764694305526404 0.9204074086893661 1.049580514801194 0.628683910495454 0.035205439225815253 0.39881320532541886 0.6363610891650305 0.01624529603923731 0.03318122713379086 2.5602095058004145e-06 5.5917244942623165 0.12917310611182797 FIVDETLDFGGLS(ph)PSDSR ddPTM_KYSE-520_SHP099_60min_R1 3 FIVDETLDFGGLSPSDSR 18 0 Q5T2Z0;Q5T2Z1;Q6PGN9-3;Q6PGN9-2;Q6PGN9 Q5T2Z0 PSRC1 Proline/serine-rich coiled-coil protein 1 1 FIVDETLDFGGLS(0.956)PS(0.036)DS(0.007)R;FIVDETLDFGGLS(0.982)PS(0.018)DSR;FIVDETLDFGGLS(0.982)PS(0.015)DS(0.002)R 185.09 2.2432e-12 53327000.0 117887.0 125483.0 103904.0 100411.0 93839.0 112766.0 100722.0 116070.0 130574.0 118575.0 True False 111347.57310809167 119454.60832617692 110601.81809227807 109954.03125033207 101223.59542912612 112062.18556557607 110903.96271199109 115667.38026094173 106865.0531026766 117524.51774995404 0.9474412253704841 1.0164228759511216 0.9410956982405598 0.9355837688632002 0.8612976880661627 0.9535217647435945 0.9436666053627304 0.984197871860546 0.9093000775382325 1.0 16.842602235026515 -9.862298881723248 13.919580132351655 1.0000024469689568 0.9445108529728767 0.15903724327376345 0.0388490418458485 0.0 0.0 0.039280754547299124 0.009526982356027973 1.3730966838124672e-10 9.862298881723248 -0.05549159399608006 FIVTLDGVPS(ph)PPGYMS(ph)DQEEDMCFEGMKPVNQTAASNK ddPTM_KYSE-520_SHP099_60min_R1 1 FIVTLDGVPSPPGYMSDQEEDMCFEGMKPVNQTAASNK 38 1 H0YJA2;Q6PJT7-9;Q6PJT7-2;Q6PJT7-5;Q6PJT7;G3V411 H0YJA2;Q6PJT7-5 ZC3H14 Zinc finger CCCH domain-containing protein 14 2 FIVTLDGVPS(0.914)PPGY(0.098)MS(0.989)DQEEDMCFEGMKPVNQTAASNK 116.86 0.00012765 127650000.0 146620.0 156690.0 127150.0 146270.0 134760.0 153270.0 143870.0 144050.0 189250.0 128790.0 True False 138486.69632027636 149162.3772035151 135346.29244719303 160171.456822321 145364.84532048553 152313.3850773804 158413.7836358903 143550.32417152257 154886.97060426683 127649.02079710367 1.0849021438276367 1.1685352247284888 1.060300279641973 1.2547801449798137 1.1387854322168356 1.1932201604545043 1.2410105666825817 1.1245705080628374 1.2133815805015653 1.0 16.961822945228604 -4.258381942441663 22.562778915494167 1.16238808953301 1.0849020347916298 0.06424234185511946 0.07555500929095552 188.38070521134705 1389876.2872491917 0.017465755105422535 0.11791831604851313 5.515921254686488e-05 4.258381942441663 -0.07748605474138026 FIYVDVLS(ph)EDEEKPK ddPTM_KYSE-520_SHP099_60min_R1 3 FIYVDVLSEDEEKPK 15 1 O94885;A0A087WW74 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 FIYVDVLS(1)EDEEKPK;FIYVDVLS(1)EDEEKPK;FIYVDVLS(1)EDEEKPK 274.6 1.2321e-25 498424000.0 1379550.0 1283140.0 1104960.0 1224620.0 1180560.0 1115630.0 1086310.0 1240360.0 1575660.0 1117650.0 True False 1303023.6114352543 1221496.0283675946 1176187.4895985087 1341007.5166045702 1273463.3555324473 1108666.9393480625 1196124.8161639273 1236057.4806622001 1289559.8631562437 1107748.4905185413 1.1762810986321488 1.1026835412755178 1.0617820738784585 1.210570384958809 1.149596109976493 1.000829113140196 1.0797801363773618 1.115828630092375 1.1641269423464489 1.0 20.079198930250584 FKAEAPLPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 FKAEAPLPSPK 11 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FKAEAPLPS(1)PK;FKAEAPLPS(1)PK;FKAEAPLPS(1)PK;FKAEAPLPS(1)PK;FKAEAPLPS(1)PK;FKAEAPLPS(1)PK;FKAEAPLPS(1)PK;FKAEAPLPS(1)PK 125.5 0.00012246 66151640000.0 29524430.0 33860260.0 34069370.0 39699460.0 45458100.0 62543200.0 75722000.0 90628300.0 112668700.0 85061300.0 True False 27886651.01240793 32233562.28431357 36265536.1031194 43472484.74232208 49035393.848791644 62152844.68957789 83376718.73550351 90313931.58010416 92210904.22679506 84307723.05869009 0.33077219975440303 0.38233225990309877 0.43015674943413507 0.5156405980986948 0.5816239849658386 0.7372141297934323 0.9889570695375266 1.0712414984476915 1.0937420782032419 1.0 26.329161460362542 -6.377482829939797 0.968906571300651 1.0895147733692723 0.3789863928937762 0.9763335999944012 0.04416164037796577 0.0755818264568262 0.14892972934295046 0.028365496773794716 0.02310727076009066 4.1929257330879577e-07 6.377482829939797 -0.710528380475496 down FKDELWR ddPTM_KYSE-520_SHP099_60min_R1 2 FKDELWR 7 1 Q8IUF8-2;Q8IUF8-4;Q8IUF8 Q8IUF8-2 MINA Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA 0 ; 101.64 0.0052981 1393600000.0 2139520.0 1788280.0 1153800.0 1030560.0 1841760.0 1754640.0 1259770.0 1259460.0 1291940.0 1458320.0 False True 2020836.5605726207 1702368.3445369957 1228175.7941452716 1128504.1125508386 1986696.0338190692 1743688.6409093416 1387119.8457703867 1255091.227220174 1057356.2631570746 1445400.4193557918 1.3981153827762816 1.1777832092339737 0.8497131851481432 0.7807553515542826 1.374495265958571 1.2063706482709446 0.9596785964602249 0.8683346223045668 0.7315317257402854 1.0 20.46303778730529 -6.97873046004853 4.174413308224729 0.8574552054208252 1.1152190814646432 0.2749944120167038 0.1946511660630281 0.3184620537872245 12.827610497115574 0.0970709260157637 0.06039678441813792 1.0501940174534701e-07 6.97873046004853 0.257763876043818 FKDHVEGK ddPTM_KYSE-520_SHP099_60min_R1 2 FKDHVEGK 8 1 E9PLK3;P55786-2;P55786 E9PLK3 NPEPPS Puromycin-sensitive aminopeptidase 0 ; 134.91 0.00072748 6195100000.0 23410000.0 22075000.0 14617700.0 14283200.0 22194000.0 21676700.0 16442900.0 20716500.0 19572000.0 15107800.0 False True 22111400.633321956 21014483.864749473 15559980.331146967 15640671.03359933 23940541.533413902 21541407.67473639 18105108.799239468 20644639.296767466 16018218.169969406 14973956.645690538 1.4766571826348618 1.403402211051371 1.0391361948830729 1.044524931097665 1.5988119973823967 1.438591561632172 1.209106532604398 1.3787030232058894 1.0697385166117335 1.0 23.835952146722892 -7.860988358826437 4.867872957800873 1.005834160150494 1.3163981189790492 0.3128584582158641 0.17180051460344078 0.27266765256228365 9.93104639463562 0.17598091746789638 0.04623234105434075 1.3772463852030453e-08 7.860988358826437 0.31056395882855514 FKDLEDK ddPTM_KYSE-520_SHP099_60min_R1 3 FKDLEDK 7 1 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 0 ;; 85.666 0.009301799999999999 2731310000.0 5521060.0 4765490.0 3204490.0 2998310.0 5061000.0 4752910.0 3602100.0 4315040.0 4272750.0 4306690.0 False True 5214795.795839759 4536548.7072536815 3411056.5527652856 3283268.480925227 5459271.9068490425 4723245.3256875565 3966235.4211082333 4300072.133377902 3496926.3072622535 4268536.077154114 1.2216824929160557 1.062787950073566 0.7991162522959111 0.7691790397410024 1.2789564872294126 1.1065258065797121 0.9291793133332428 1.0073880261648893 0.8192331619213343 1.0 22.025309942132505 -4.406121130289012 4.012546142340856 0.9701346792992799 1.2149729769631399 0.22607599708964643 0.14552166804414726 0.3784222194741764 9.648460208856653 0.03917681669851331 0.19129549677479052 3.925354369730957e-05 4.406121130289012 0.24483829766386 FKDPNAPK ddPTM_KYSE-520_SHP099_60min_R1 2 FKDPNAPK 8 1 P23497;P09429;Q5T7C4;B2RPK0 P23497;P09429 SP100;HMGB1;HMGB1P1 Nuclear autoantigen Sp-100;High mobility group protein B1;Putative high mobility group protein B1-like 1 0 ; 87.639 0.0052896 3502700000.0 13635500.0 11791800.0 8997300.0 8061200.0 12769900.0 12112600.0 9272500.0 11379100.0 10735400.0 10261100.0 False True 12879111.633304648 11225304.228147365 9577280.354188988 8827334.024311839 13774818.479207976 12037000.770459153 10209854.790879212 11339628.558001906 8786121.977411063 10170194.63701501 1.2663584221319009 1.1037452702519797 0.9417007929555177 0.8679611688240703 1.3544301727593029 1.1835565788141158 1.003899645511194 1.1149863854847648 0.8639089310477369 1.0 23.27784395394474 -7.750258555771949 24.98671833355858 0.9319544623646768 1.098840316833039 0.19389900043269437 0.14040022971113963 335.6340059670958 750080.4207213612 0.10170102842446117 0.037657300143145375 1.777221032402648e-08 7.750258555771949 0.16688585446836213 FKEECKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 FKEECKSPK 9 2 H7C5E4;Q8IZH2-2;Q8IZH2 H7C5E4 XRN1 5-3 exoribonuclease 1 1 FKEECKS(1)PK;FKEECKS(1)PK 86.814 0.0035357 6062800000.0 5493400.0 4857800.0 4542700.0 4843400.0 5161100.0 5375900.0 5285700.0 6078600.0 7922600.0 6058600.0 True False 5188670.151178595 4624423.996293547 4835529.710576985 5303715.279778693 5567249.207357954 5342347.014011153 5820030.139460808 6057514.755355908 6484055.552493335 6004925.517519478 0.8640690273410647 0.7701051383238154 0.8052605642599963 0.8832274878855714 0.9271137820303358 0.8896608290019185 0.9692093802796996 1.0087576836187226 1.0797895050614676 1.0 22.517714920805176 -6.3946944448903205 0.679010034917334 1.042878918575393 0.8061052991360607 0.819817253149927 0.03874558837733987 0.29870380781434125 0.2953334630970007 0.03150455745868043 0.02861477954529202 4.03000472293484e-07 6.3946944448903205 -0.2367736194393324 FKEEGVR ddPTM_KYSE-520_SHP099_60min_R1 1 FKEEGVR 7 1 A0A0A0MSX9;P41252;J3KR24 A0A0A0MSX9 IARS Isoleucine--tRNA ligase, cytoplasmic 0 103.74 0.0047729999999999995 617480000.0 709490.0 555950.0 448790.0 378750.0 683710.0 585280.0 430380.0 510690.0 543160.0 558710.0 False True 670133.1753667502 529241.3275020374 477719.7214893883 414746.2861246602 737514.0872222402 581627.0504214069 473887.0105040279 508918.535585942 444535.8359493447 553760.2640698027 1.2101503463641055 0.9557228314152302 0.8626832809895704 0.7489636094083857 1.3318291959086377 1.0503228349156006 0.8557620350388546 0.9190232102348747 0.8027586390584897 1.0 19.078902009026127 -6.761776046795908 24.99999852601658 0.8876378931772204 1.0171916067728626 0.1374866967732179 0.16085891805999794 20.85929749404585 1548727.3467303999 0.06775735258626914 0.048925166968217824 1.7307086059150963e-07 6.761776046795908 0.12955371359564216 FKFPGR ddPTM_KYSE-520_SHP099_60min_R1 2 FKFPGR 6 1 X1WI28;P27635;F8W7C6;A0A087WV22;H7C123;H7C2C5;Q96L21 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like 0 ; 120.96 0.008874600000000002 3692300000.0 5538000.0 4628500.0 3595600.0 3281200.0 4705300.0 4478500.0 3449900.0 3939900.0 3885600.0 3227900.0 False True 5230796.100270705 4406139.912479857 3827378.1291634054 3593044.261471247 5075580.340505204 4450548.020284777 3798649.559779377 3926233.4064795696 3180072.9880049634 3199303.3172682007 1.634979738256622 1.3772185615217445 1.1963161193579799 1.1230708392286015 1.586464250860436 1.3910991171931082 1.1873364864394733 1.2272151206444768 0.9939892134767461 1.0 21.609326346264922 -7.42172628473006 1.275158136956748 0.9892149444856204 1.3692141299638128 0.4812497150231869 0.15180782767676732 0.4488249644660367 1.282718415241529 0.1433535058832436 0.05066530104544058 3.786811743560003e-08 7.42172628473006 0.37999918547819234 FKGPGDTSNFDDYEEEEIRVS(ph)INEK ddPTM_KYSE-520_SHP099_60min_R1 1 FKGPGDTSNFDDYEEEEIRVSINEK 25 2 K7ERP6;P17612-2;P17612 K7ERP6 PRKACA cAMP-dependent protein kinase catalytic subunit alpha 1 FKGPGDTSNFDDYEEEEIRVS(1)INEK 108.04 0.00046018 512080000.0 318400.0 265800.0 254340.0 257270.0 256630.0 254170.0 323390.0 261020.0 347260.0 262030.0 True False 300737.71728533594 253030.5690260661 270735.1633583884 281720.8634489542 276825.32097503863 252583.63075042548 356081.4171822524 260114.58254252566 284206.3377122202 259708.61805625504 1.1579812773875438 0.9742863787880062 1.0424573715907453 1.0847574699578553 1.0659073351007395 0.9725654567832391 1.3710804818387745 1.0015631536962808 1.0943277117229078 1.0 17.986534363003496 FKIDS(ph)NISPK ddPTM_KYSE-520_SHP099_60min_R1 1 FKIDSNISPK 10 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 FKIDS(0.708)NIS(0.292)PK 52.555 0.045686000000000004 4394500000.0 10569000.0 9710100.0 9642000.0 8476000.0 9568500.0 9201700.0 8430200.0 9005900.0 10400000.0 8459000.0 True False 9982716.50122084 9243612.220842758 10263538.747745465 9281556.491597665 10321486.512682308 9144268.777102698 9282406.886823414 8974660.63489286 8511622.162665116 8384059.841002412 1.1906781070908112 1.1025222143139637 1.2241728878831977 1.107047977664237 1.2310845471551708 1.090673128593676 1.10714940766854 1.070443294190495 1.0152148629759126 1.0 22.999217583433474 -7.2266971673033 0.9089618927434959 0.9992081519651396 1.1663129862428179 0.6622710670325032 0.043932802160164874 0.3394405774482551 0.5061917590462998 0.036637550662978045 0.015633729923261355 5.9333891443540136e-08 7.2266971673033 0.1671048342776783 FKIDSNIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 FKIDSNISPK 10 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 FKIDS(0.002)NIS(0.998)PK;FKIDS(0.189)NIS(0.811)PK;FKIDS(0.107)NIS(0.893)PK;FKIDS(0.058)NIS(0.942)PK;FKIDSNIS(1)PK;FKIDSNIS(1)PK;FKIDSNIS(1)PK 131.35 0.00022347 60622600000.0 83186000.0 73745100.0 75635500.0 68178100.0 70103000.0 69282500.0 67472500.0 66949500.0 83271000.0 67396200.0 True False 78571506.75282021 70202274.70234814 80511085.35107891 74657726.12550677 75619707.26849213 68850082.21846159 74293278.76814224 66717267.810630776 68151085.49108529 66799122.10145011 1.1762356192868968 1.0509460677601354 1.2052716086418618 1.1176453189328077 1.132046423509068 1.0307033992736703 1.1121894484677584 0.998774620260802 1.0202392388867314 1.0 25.993325806608365 -6.786381133629402 0.778447915525737 0.9985856097903641 1.1399782969851242 0.5679873851071626 0.0463673968945295 0.48558453194248113 0.5756974878424692 0.036967169907051324 0.02225581382257022 1.635380693467107e-07 6.786381133629402 0.14139268719476006 FKIDSNIS(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 1 FKIDSNISPKK 11 2 Q9H501 Q9H501 ESF1 ESF1 homolog 1 FKIDS(0.022)NIS(0.978)PKK 67.115 0.029077999999999996 0.0 423230.0 458930.0 463500.0 358330.0 355150.0 340710.0 305170.0 324180.0 594570.0 327940.0 True False 399752.5882119122 436882.31393202645 493377.95162622095 392385.5754641574 383098.2844729179 338583.50251004257 336019.5617721883 323055.4952441808 486611.0758899813 325034.7067334596 1.229876625266741 1.3441097362266792 1.5179239059870888 1.207211314162607 1.1786380855231948 1.0416841509411285 1.0337959448980834 0.9939107687632206 1.4971049731283628 1.0 18.310234249682168 -5.553563635906902 3.261321688828111 1.1153957630098859 1.36314230934719 0.3237222488142779 0.1530741052638023 0.2807805505385227 6.188710502455929 0.04637225031572718 0.06497716642153147 2.7953511029066618e-06 5.553563635906902 0.24774654633730409 FKIPGS(ph)PPESMGR ddPTM_KYSE-520_SHP099_60min_R1 3 FKIPGSPPESMGR 13 1 P50395-2;P50395;V9GYJ7;V9GYF8;Q5SX90;Q5SX86;Q5SX87 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 1 FKIPGS(0.975)PPES(0.025)MGR;FKIPGS(0.989)PPES(0.011)MGR;FKIPGS(0.987)PPES(0.013)MGR 61.757 0.022535 1809010000.0 2480480.0 2406310.0 2123230.0 1845540.0 2165640.0 2360510.0 1982050.0 2128180.0 2598620.0 2108050.0 True False 2342882.8296857122 2290707.2556550507 2260096.803088115 2020939.5667181667 2336063.547193948 2345777.181503277 2182414.9569438836 2120797.8403009474 2126776.1138793128 2089374.317038083 1.1213322622855848 1.0963603969739513 1.081709861491956 0.9672462948539876 1.1180684706154396 1.122717534323229 1.0445303836402544 1.0150396810215465 1.0179009555809277 1.0 20.994639547587585 -1.0000000000083038 0.08350816842104308 0.9384812632430111 1.3923055553294603 0.31907635795980493 0.044494026467134684 248.9367984041448 1.5116730702817507 1.1786380945294026 12.992666857426581 0.09999999999808798 1.0000000000083038 0.45382429208644925 FKIPSLGWS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 4 FKIPSLGWSPSK 12 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 FKIPSLGWS(0.903)PS(0.097)K;FKIPSLGWS(0.975)PS(0.025)K;FKIPSLGWS(0.983)PS(0.017)K;FKIPSLGWS(0.977)PS(0.023)K 115.56 0.00010055 624243000.0 1963340.0 1957410.0 1703690.0 1626560.0 1890690.0 1757050.0 1432450.0 1406960.0 2093390.0 1213890.0 True False 1854429.6163787448 1863373.0854676883 1813512.5834003813 1781147.7733569045 2039476.546445448 1746083.5992053933 1577256.0253647813 1402079.584146934 1713283.146067455 1203135.8789921284 1.5413301595927866 1.5487636251265677 1.507321504633016 1.4804211265389067 1.6951340094303606 1.4512771414215444 1.3109541930426467 1.1653543117020677 1.4240146736399208 1.0 20.198368155211416 -7.604430510615674 0.5073030263046613 1.0166574701525306 1.5711121986673091 0.7115614528462413 0.103562516981386 0.4800793238455872 0.309783088759327 0.1144918242641989 0.06583755135531881 2.48639136800105e-08 7.604430510615674 0.5544547285147785 FKMPDMHFK ddPTM_KYSE-520_SHP099_60min_R1 2 FKMPDMHFK 9 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 102.53 0.0020811 904980000.0 2904800.0 2713600.0 2196520.0 1987710.0 3638100.0 2782300.0 2127520.0 2263170.0 2680500.0 1762320.0 False True 2743664.953424763 2583234.5828033597 2338111.1937562604 2176621.360773198 3924397.772042585 2764934.633658221 2342590.4841942703 2255319.591497848 2193788.7699061427 1746707.215864214 1.57076408026819 1.4789167636919958 1.3385822034286603 1.2461283385128035 2.2467404590762627 1.5829410954200593 1.3411466231535734 1.2911835315124571 1.2559567796946023 1.0 20.736206372415655 -7.50881718681937 1.2248122358599758 1.062157864613362 1.5647553138614552 0.3332743511185716 0.25781121711182425 0.5997802704411112 1.6152702547931173 0.25188619391663297 0.08678048480667383 3.098723410351819e-08 7.50881718681937 0.5025974492480931 FKMPDVHFK ddPTM_KYSE-520_SHP099_60min_R1 1 FKMPDVHFK 9 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 64.297 0.030157 338530000.0 837650.0 835740.0 638220.0 576990.0 1034100.0 798660.0 611850.0 655710.0 735000.0 495770.0 False True 791183.8846861243 795589.7959286853 679360.6823881054 631826.9561216305 1115477.7867758546 793675.2666921149 673701.7690805554 653435.4950538652 601542.5278421978 491377.8635032239 1.6101333483878713 1.6190997906511624 1.3825626525881303 1.2858270651776829 2.270101829217905 1.6152035442412793 1.371046233701847 1.329802466874005 1.2241954156289563 1.0 18.906473340412283 -7.4717593855767035 1.2302292692273737 1.0555683081386316 1.6210221917217353 0.4068429362106083 0.25020834671147146 0.51265469554692 1.3784384804640886 0.24094759017348047 0.08404517871478759 3.37474229470636e-08 7.4717593855767035 0.5654538835831038 FKMPEMHFK ddPTM_KYSE-520_SHP099_60min_R1 3 FKMPEMHFK 9 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ;; 90.10799999999999 0.0040971 2385960000.0 4910240.0 4724080.0 3735290.0 3324210.0 6226190.0 4629430.0 3467130.0 3610050.0 4311500.0 2865990.0 False True 4637859.198879231 4497128.105811353 3976072.770075308 3640141.9189398168 6716155.730824831 4600536.010170138 3817621.3363279644 3597527.579142005 3528640.284070253 2840599.5583064826 1.6327043300831336 1.58316158737012 1.3997301233285326 1.2814695785948822 2.3643444255229307 1.6195651360703935 1.3439491410059803 1.2664676964488406 1.2422167263075858 1.0 21.43776403725994 -6.899464931493891 3.0990254005053695 1.2027566421727516 1.6487148086565848 0.382555023994371 0.2758029082223387 0.31423067819338263 6.018358308512334 0.13772871988786126 0.0865599453636796 1.2604774150920688e-07 6.899464931493891 0.44595816648383324 FKMPFLSISS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 FKMPFLSISSPK 12 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 FKMPFLS(0.001)IS(0.139)S(0.86)PK;FKMPFLSIS(0.046)S(0.954)PK;FKMPFLSIS(0.032)S(0.968)PK;FKMPFLSIS(0.087)S(0.913)PK;FKMPFLSIS(0.014)S(0.986)PK;FKMPFLSIS(0.003)S(0.997)PK 172.57 1.1931e-06 3259799000.0 7138763.0 8122968.0 9689428.0 6977790.0 7717677.0 7677209.0 6066025.0 5724508.0 9492294.0 5184292.0 True False 6742761.585618767 7732728.424456455 10314024.032512944 7640957.063650944 8325014.272324643 7629292.690914915 6679238.0056989165 5704651.017858209 7768732.690858949 5138363.206198139 1.3122391927229522 1.5049010967400802 2.007258657790418 1.4870410589959964 1.6201685124715617 1.484771002896817 1.2998765828079457 1.110207820843997 1.5119080491406158 1.0 22.292877440345517 -6.692984692161142 2.351837906653958 1.2269332834584943 1.5993956676958931 0.4070461786826137 0.20457203813789546 0.31165859089022446 3.5206003865192814 0.09483983459668725 0.06565509455167538 2.0277541917334762e-07 6.692984692161142 0.37246238423739886 FKNEDLT(ph)DELSLNK ddPTM_KYSE-520_SHP099_60min_R1 1 FKNEDLTDELSLNK 14 1 P33981-2;P33981;D6RFY1;D6RF82;D6REX1;D6RIC6 P33981-2 TTK Dual specificity protein kinase TTK 1 FKNEDLT(1)DELSLNK 265.37 4.4926e-22 0.0 276610.0 257140.0 259800.0 236420.0 204780.0 215440.0 235090.0 223250.0 287570.0 224130.0 True False 261265.8918916359 244786.60842499096 276547.123694697 258889.28571773492 220895.02096118315 214095.3590465897 258855.1914572983 222475.5978569417 235354.53704976992 222144.38257050145 1.1761084789471035 1.1019257187262146 1.2448981175876903 1.1654100037194135 0.9943759027581002 0.9637667023997005 1.1652565257874392 1.0014909910509897 1.0594665249978852 1.0 17.76113813439762 -5.748662818693921 23.913441193105065 1.0341792177987434 1.1722751487276508 0.5648905687920385 0.0607327256126095 105.34801680371966 197174.43411382881 0.0180794419914695 0.023166420781268075 1.7837631234209725e-06 5.748662818693921 0.13809593092890737 FKNELER ddPTM_KYSE-520_SHP099_60min_R1 2 FKNELER 7 1 Q2VIR3;P41091;H7BZU1;Q2VIR3-2 Q2VIR3 EIF2S3L;EIF2S3 Putative eukaryotic translation initiation factor 2 subunit 3-like protein;Eukaryotic translation initiation factor 2 subunit 3 0 ; 114.28 0.0030781 1094600000.0 3283600.0 2710100.0 1838870.0 1574080.0 2525100.0 2309980.0 1844860.0 2051250.0 2206350.0 2034110.0 False True 3101452.1623056843 2579902.7280569696 1957406.5024960262 1723680.0899355905 2723811.0041463203 2295562.5579764275 2031356.4528985112 2044134.692515349 1805732.4575573276 2016089.367913634 1.5383505372657396 1.279656928465826 0.9708927261104817 0.8549621447184925 1.3510368376998474 1.1386214294418944 1.0075726231326125 1.0139107546758892 0.8956609197468285 1.0 20.943128160437894 -4.4932781603808465 3.033983358880647 1.0387635200788718 1.5292350313714105 0.6013200494173148 0.1314037752313543 0.2000783109638043 3.4022502424653536 0.03643497539427923 0.17883058499385102 3.211602886822436e-05 4.4932781603808465 0.49047151129253863 FKPESSS(ph)PVKK ddPTM_KYSE-520_SHP099_60min_R1 1 FKPESSSPVKK 11 2 Q5TCQ9;Q5TCQ9-1 Q5TCQ9 MAGI3 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 1 FKPES(0.013)S(0.071)S(0.915)PVKK 69.92 0.018541 619560000.0 341040.0 294490.0 303990.0 272150.0 338260.0 280840.0 265710.0 282090.0 357810.0 272360.0 True False 322121.83135361515 280342.25836149836 323585.6818011973 298015.05417511903 364879.13756387215 279087.1733876918 292570.5598797001 281111.495630301 292840.72365607746 269947.10229287384 1.1932776037141357 1.0385081224444725 1.1987003344460032 1.1039757480033752 1.3516690287269824 1.0338587486851465 1.0838070029078561 1.0413577076493845 1.0848078055617194 1.0 18.04231720491119 FKRPQFS(ph)PTGDCQAEAAAAANGTGGEEDDGPAAELLEK ddPTM_KYSE-520_SHP099_60min_R1 6 FKRPQFSPTGDCQAEAAAAANGTGGEEDDGPAAELLEK 38 2 Q7Z4Q2 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 1 FKRPQFS(0.968)PT(0.032)GDCQAEAAAAANGTGGEEDDGPAAELLEK;FKRPQFS(0.846)PT(0.154)GDCQAEAAAAANGTGGEEDDGPAAELLEK;FKRPQFS(0.794)PT(0.206)GDCQAEAAAAANGTGGEEDDGPAAELLEK;FKRPQFS(0.988)PT(0.012)GDCQAEAAAAANGTGGEEDDGPAAELLEK;FKRPQFS(0.847)PT(0.153)GDCQAEAAAAANGTGGEEDDGPAAELLEK;FKRPQFS(0.836)PT(0.164)GDCQAEAAAAANGTGGEEDDGPAAELLEK 400.78 1.6801999999999998e-115 31177760000.0 1835105.0 1826156.0 1554971.0 1486552.0 1574932.0 1727884.0 1414309.0 1591404.0 2021100.0 1559404.0 True False 1733308.0674588783 1738424.7246439601 1655206.918701567 1627833.4551318458 1698870.188262712 1717099.6350299728 1557281.1560456841 1585883.7909604872 1654119.1877848536 1545588.8937579554 1.12145478947154 1.1247652798650374 1.0709231448196328 1.0532124432997965 1.0991733928237977 1.1109678918920056 1.0075649238519695 1.0260709024018402 1.0702193801114972 1.0 20.559725201776978 -1.0000000000103522 0.11082283766603933 0.9688808353103973 1.444590606313692 0.5606207385520118 0.029016500769908114 85.44611861344475 0.6616561856174723 0.2802184385946246 6.220796292756579 0.09999999999761633 1.0000000000103522 0.4757097710032947 FKRPQFSPT(ph)GDCQAEAAAAANGTGGEEDDGPAAELLEK ddPTM_KYSE-520_SHP099_60min_R1 2 FKRPQFSPTGDCQAEAAAAANGTGGEEDDGPAAELLEK 38 2 Q7Z4Q2 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 1 FKRPQFS(0.372)PT(0.628)GDCQAEAAAAANGTGGEEDDGPAAELLEK;FKRPQFS(0.333)PT(0.657)GDCQAEAAAAANGT(0.01)GGEEDDGPAAELLEK 232.93 3.9146e-31 2985150000.0 424360.0 382210.0 336620.0 329330.0 322720.0 374980.0 301610.0 335020.0 440550.0 338360.0 True False 400819.9048593127 363848.057891094 358319.06381104345 360629.42418332497 348116.2279743775 372639.61072823196 332099.6822299358 333857.8938142558 360557.22536174225 335362.39364009677 1.1951844108360683 1.0849399479226267 1.0684533227526496 1.0753424683935915 1.0380300074669906 1.1111550304836513 0.9902710874205458 0.9955138087800757 1.0751271824135535 1.0 18.35536139365875 -1.0000000000000002 0.5051754624946675 1.030368283503193 6.053273264795191 0.6290036789300122 0.03605351603441171 74.26863241745747 0.7797099112079326 0.01976477905524963 396.81274656100214 0.09999999999999995 1.0000000000000002 5.0229049812919975 FKRPQFSPTGDCQAEAAAAANGT(ph)GGEEDDGPAAELLEK ddPTM_KYSE-520_SHP099_60min_R1 1 FKRPQFSPTGDCQAEAAAAANGTGGEEDDGPAAELLEK 38 2 Q7Z4Q2 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 1 FKRPQFS(0.058)PT(0.058)GDCQAEAAAAANGT(0.884)GGEEDDGPAAELLEK 125.02 3.823e-05 6925500000.0 74828.0 86855.0 83021.0 55822.0 62202.0 65953.0 77257.0 94320.0 78753.0 73964.0 True False 70677.1416740802 82682.3554279871 88372.66649829673 61127.30609650373 67096.94351903263 65541.36286297682 85066.8915156598 93992.82593445343 64453.44040157369 73308.73650312121 0.9641025755650696 1.127864963604533 1.2054861495878346 0.8338338513568728 0.915265311061198 0.8940457302819059 1.1603922748284983 1.2821504014115912 0.87920544639082 1.0 16.161697520045728 -9.272079159125532 14.379628023592716 0.9999999999999938 1.0354729057175707 0.0018494011014157374 0.1478237105445522 0.0 0.0 0.1501749785349152 0.03642278228378356 5.344669328977224e-10 9.272079159125532 0.035472905717576886 FKTTVCS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 1 FKTTVCSVK 9 1 E9PQ84;E9PP51;E9PJF3;P49326-2;P49326-3;P49326 E9PQ84 FMO5 Dimethylaniline monooxygenase [N-oxide-forming] 5 1 FKT(0.001)T(0.001)VCS(0.999)VK 54.143 0.039311 604830000.0 752300.0 714500.0 751260.0 604970.0 817820.0 678000.0 717980.0 852970.0 937070.0 853090.0 True False 710568.4193271311 680174.3475136351 799687.4216585002 662466.166909137 882177.7812407212 673768.3505086697 790560.4252095408 850011.2461546938 766921.7096123659 845532.2862939768 0.8403799959450382 0.8044333238827386 0.9457798769146739 0.7834900897903846 1.0433401486149796 0.7968570348293149 0.934985497330467 1.0052972073725872 0.907028296901392 1.0 19.689500318825935 -1.0000000000312406 0.12358880326439924 1.0360434628163946 0.3397058904218455 0.2711321348609773 0.07708465313627771 115.0258037297885 0.9738693972100085 0.4613558933232995 13.847515188409774 0.09999999999280659 1.0000000000312406 -0.6963375723945491 FKVQGEAVSNIQENTQTPTVQEES(ph)EEEEVDETGVEVK ddPTM_KYSE-520_SHP099_60min_R1 3 FKVQGEAVSNIQENTQTPTVQEESEEEEVDETGVEVK 37 1 F8VZJ2;F8W0W4;H0YHX9;Q13765;E9PAV3-2;E9PAV3 F8VZJ2 NACA Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form 1 FKVQGEAVSNIQENTQT(0.031)PT(0.168)VQEES(0.771)EEEEVDET(0.03)GVEVK;FKVQGEAVSNIQENTQT(0.005)PT(0.148)VQEES(0.819)EEEEVDET(0.028)GVEVK;FKVQGEAVSNIQENTQTPT(0.001)VQEES(0.999)EEEEVDETGVEVK 215.84 1.1434e-22 168114000.0 186058.0 220017.0 165695.0 134000.6 130004.0 156206.0 115837.7 163817.9 245954.0 166162.0 True False 175736.9918425723 209447.0530677503 176375.96482137364 146735.9767352507 140234.57517842384 155231.0604123262 127547.70518300682 163249.65394028518 201294.9535957824 164689.93395208 1.0670779180329666 1.2717659667572234 1.070957772517499 0.8909832751402197 0.851506657469594 0.9425655635850454 0.7744717732421916 0.9912545959717617 1.2222662840726708 1.0 17.329392852930255 -5.035387623425575 4.856093286517878 0.942191156493836 1.1715686901756963 0.34426657095675817 0.12018530651980665 0.19938429022743318 11.630369374696992 0.03374938301793122 0.06396008039093967 9.217483663762415e-06 5.035387623425575 0.2293775336818603 FKYDDAER ddPTM_KYSE-520_SHP099_60min_R1 8 FKYDDAER 8 1 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;A0A087X1X7;E9PK01;E9PQZ1;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;H0YCK7;E9PK06;E9PIZ1;E9PMW7;E9PN91;E9PK72;E9PKK3;E9PJD0;E9PNW6 P29692-2 EEF1D Elongation factor 1-delta 0 ;;;;;;; 143.03 0.00061995 27309100000.0 50296400.0 45393600.0 30287000.0 30473700.0 47102700.0 46476400.0 36701700.0 41077100.0 37687200.0 38145100.0 False True 47506358.4286124 43212823.31881726 32239348.480913363 33369911.285748 50809414.51229769 46186323.54805479 40411866.01007411 40934613.127567224 30844154.496999294 37807164.09043875 1.2565438210327584 1.1429797594828217 0.8527312020492576 0.8826346034821239 1.3439096989860486 1.2216288806420974 1.0688944008972647 1.0827210692039022 0.8158283023613409 1.0 25.17215630126209 -7.667623135915464 7.118090259902933 0.9096886327062595 1.103477791184735 0.21818890135398394 0.15057840950796267 0.35437539330535656 22.375471954649544 0.11262845745585408 0.04159172649077071 2.1496950878921175e-08 7.667623135915464 0.19378915847847555 FKYDDAERR ddPTM_KYSE-520_SHP099_60min_R1 4 FKYDDAERR 9 2 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;A0A087X1X7;E9PK01;E9PQZ1;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;H0YCK7;E9PK06;E9PIZ1;E9PMW7;E9PN91;E9PK72;E9PKK3;E9PJD0;E9PNW6 P29692-2 EEF1D Elongation factor 1-delta 0 ;;; 145.99 0.00022199 8509400000.0 9377200.0 10059900.0 7664200.0 5630150.0 8904200.0 8620800.0 6234150.0 6591600.0 8429800.0 5623490.0 False True 8857028.023015248 9576607.303782249 8158246.595153584 6165237.763233677 9604909.88203226 8566994.389476616 6864358.721440787 6568735.278090998 6899160.817964841 5573670.253609024 1.5890836055972646 1.7181869159879473 1.4637117418044265 1.1061360795862663 1.7232648228181342 1.537047223762363 1.2315688602130752 1.1785295826995965 1.2378128780577833 1.0 22.410196222366007 -6.873246718712978 0.2192316103789934 0.8893723711819728 1.7791262076314616 0.5171250665648532 0.17159863629882108 2.7017202085462593 0.47141778114355287 0.5887833284002474 0.9023978294103627 1.3389158455178695e-07 6.873246718712978 0.8897538364494888 FLDGIYVSEK ddPTM_KYSE-520_SHP099_60min_R1 2 FLDGIYVSEK 10 0 A0A2R8Y5Y7;P32969;H0Y9R4;H0Y9V9;D6RAN4 A0A2R8Y5Y7 RPL9 60S ribosomal protein L9 0 ; 166.19 0.00076782 414260000.0 1271200.0 1550240.0 985060.0 828680.0 1365590.0 1508050.0 1061240.0 1224100.0 1248020.0 1260600.0 False True 1200684.001925625 1475764.1434423188 1048558.5437517272 907437.4980482734 1473054.1638557597 1498637.7005672571 1168520.4959043043 1219853.8828070862 1021411.0280239724 1249432.06473196 0.9609838228244983 1.1811479672237433 0.839228136806841 0.7262799824518235 1.1789789980872416 1.1994551307507537 0.9352413219481337 0.9763266985378519 0.8175002521990623 1.0 20.25284102934119 -6.955292153169719 24.999154047312 0.9293028326991915 1.013273033105428 0.06690416824304335 0.15013466720046878 430.4672000403285 240701.9780150395 0.0677391632505046 0.045669702183108875 1.1084289159224255e-07 6.955292153169719 0.0839702004062366 FLEESVSMS(ph)PEER ddPTM_KYSE-520_SHP099_60min_R1 9 FLEESVSMSPEER 13 0 A0A087WTB8;Q5TBK7;P15374 A0A087WTB8 UCHL3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3 1 FLEES(0.005)VS(0.005)MS(0.99)PEER;FLEES(0.015)VS(0.011)MS(0.973)PEER;FLEESVSMS(1)PEER;FLEESVSMS(1)PEER;FLEESVSMS(1)PEER;FLEESVSMS(1)PEER;FLEESVSMS(1)PEER;FLEES(0.003)VS(0.019)MS(0.979)PEER;FLEESVS(0.016)MS(0.984)PEER 380.89 3.5805999999999995e-78 5424420000.0 4240130.0 4098940.0 3885840.0 3660250.0 3760010.0 3897120.0 3664150.0 3852610.0 4726590.0 3805630.0 True False 4004921.5364103992 3902020.769765628 4136327.463963827 4008119.0595057053 4055901.395469569 3872796.628516738 4034558.040657872 3839246.195115936 3868360.4036376257 3771915.0789353386 1.0617740464986367 1.0344932714834643 1.0966120332516467 1.0626217652378955 1.0752896898766842 1.0267454456079308 1.0696311969453636 1.0178506447710383 1.0255693255770513 1.0 21.84686576480219 -7.481149738690198 0.8181726662070713 1.000902342674184 1.0645530283097677 0.5448101508960119 0.01946153412419495 0.45161922099353763 0.5882275142541533 0.01780271445448402 0.007302803732236776 3.302556538536513e-08 7.481149738690198 0.06365068563558363 FLEGVR ddPTM_KYSE-520_SHP099_60min_R1 2 FLEGVR 6 0 F8VWS0;Q8NHW5;P05388;F8VW21;F8VZS0;F8VU65 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 0 ; 116.87 0.063721 1083870000.0 1793570.0 1713160.0 1312480.0 1194950.0 1796320.0 1707170.0 1345950.0 1438870.0 1514640.0 1513250.0 False True 1694077.096706846 1630857.2220944157 1397084.5608422495 1308517.6887251816 1937680.164337301 1696514.9187874417 1482011.761206134 1433878.895804783 1239619.556967222 1499843.7822906836 1.1295023633191408 1.0873513904252332 0.9314867170422964 0.8724359857842707 1.2919213235513887 1.131127747315381 0.9881107477357974 0.9560188285841652 0.8264991138436923 1.0 20.516380812544547 -7.103946206296349 2.9140472348100928 0.9166262005537816 1.0681350898353235 0.24411416904693695 0.11513113060617822 0.42984063085055046 6.985453106268464 0.06707128350768472 0.035467092977044166 7.87143282829225e-08 7.103946206296349 0.15150888928154183 FLENGS(ph)QEDLLHGNPGSTYLASNSTSAPNWK ddPTM_KYSE-520_SHP099_60min_R1 5 FLENGSQEDLLHGNPGSTYLASNSTSAPNWK 31 0 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 FLENGS(1)QEDLLHGNPGSTYLASNSTSAPNWK;FLENGS(1)QEDLLHGNPGSTYLASNSTSAPNWK;FLENGS(1)QEDLLHGNPGSTYLASNSTSAPNWK;FLENGS(1)QEDLLHGNPGSTYLASNSTSAPNWK;FLENGS(1)QEDLLHGNPGSTYLASNSTSAPNWK 304.87 4.723399999999999e-54 2679390000.0 2500550.0 2576850.0 2173130.0 2653040.0 2043320.0 2134760.0 1982160.0 1842690.0 2665200.0 1981960.0 True False 2361839.5067771566 2453054.258069296 2313213.436930938 2905184.1239344357 2204117.659099546 2121436.170990985 2182536.0768173784 1836298.1384770805 2181266.864224525 1964401.3763415485 1.202320226009914 1.2487540925255316 1.1775665934621815 1.4789157444722305 1.1220301948700722 1.0799402792833988 1.111043854429627 0.934787646044596 1.1103977478812712 1.0 20.905658307782716 -5.9864554308107465 24.910046658044298 1.053128340313465 1.2718710825480037 0.5912112526235709 0.09017347610061342 161.8721287027463 297699.8978646454 0.02772852943081528 0.03142640683661372 1.0316789493893973e-06 5.9864554308107465 0.2187427422345387 FLEQS(ph)MDIEDLK ddPTM_KYSE-520_SHP099_60min_R1 4 FLEQSMDIEDLK 12 0 O95239;O95239-2;Q2VIQ3 O95239 KIF4A;KIF4B Chromosome-associated kinesin KIF4A;Chromosome-associated kinesin KIF4B 1 FLEQS(1)MDIEDLK;FLEQS(1)MDIEDLK;FLEQS(1)MDIEDLK;FLEQS(1)MDIEDLK 224.59 4.6119e-11 558801000.0 1159620.0 967280.0 920530.0 991880.0 936510.0 959040.0 968060.0 1103700.0 1157570.0 1110220.0 True False 1095293.566954841 920810.4168831191 979868.8367000755 1086147.976980404 1010208.0089869988 953054.2756221739 1065920.9521551395 1099871.5223055172 947384.4679650255 1100384.3145380893 0.9953736639863089 0.8368080176330482 0.8904787388862383 0.98706239504726 0.9180501717811709 0.8661103789199681 0.9686806128298762 0.9995339880569023 0.8609578085113936 1.0 20.069576049296863 -13.999999999031832 0.1824581281499437 1.309084717811609 0.9096128739046708 0.11566489027622784 0.05792840461306194 284.50649855287395 2.7499748926765104 31.927069823588674 0.1743792344663241 1.0000000022292887e-14 13.999999999031832 -0.39947184390693813 FLES(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 2 FLESPSR 7 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 FLES(0.672)PS(0.328)R;FLES(0.964)PS(0.036)R 140.11 0.0027555 0.0 880170.0 824200.0 781900.0 735990.0 779630.0 756120.0 711320.0 701810.0 918610.0 708340.0 True False 831345.2155246054 784604.1948505789 832302.5250842343 805938.2683165387 840982.4455120969 751400.7746115265 783227.167414205 699375.5849136862 751813.5802736359 702064.6586801803 1.1841433766050282 1.1175668581944656 1.1855069398435318 1.147954477343485 1.1978703601076712 1.070272894841472 1.1156054613069444 0.9961697633782771 1.0708608829377328 1.0 19.42124438026799 -6.803112645412079 1.197068218960359 1.022058317671216 1.1636821364197014 0.7152273634872643 0.03720080425696235 0.24743303272762782 0.7034228813486331 0.02368336494454327 0.013022044596969793 1.57357466458378e-07 6.803112645412079 0.1416238187484855 FLESAAADFS(ph)DEDEDDDVDGREK ddPTM_KYSE-520_SHP099_60min_R1 2 FLESAAADFSDEDEDDDVDGREK 23 1 O43815-2;O43815 O43815-2 STRN Striatin 1 FLES(0.299)AAADFS(0.701)DEDEDDDVDGREK;FLES(0.01)AAADFS(0.99)DEDEDDDVDGREK 78.428 0.0035329999999999997 736510000.0 1385860.0 1465560.0 1533580.0 1068380.0 1385770.0 1309610.0 962610.0 1061150.0 1889870.0 1223500.0 True False 1308983.583156582 1395152.297749593 1632437.0206147556 1169918.5139798413 1494822.215047263 1301436.2382148355 1059920.0129682675 1057469.1183242719 1546717.247745762 1212660.741868597 1.0794309883731872 1.1504885493363903 1.3461613493806377 0.9647533506998058 1.2326796468597487 1.073207199079805 0.8740449627610025 0.8720238742905214 1.275474000553869 1.0 20.20974456291374 -6.522946033010757 24.99914956592556 0.9917074542707752 1.1543915946659766 0.20226975751125886 0.1390188793301718 3.6537880224724613 1356071.2954441886 0.05178806281389768 0.04052375010097001 2.9995352288307436e-07 6.522946033010757 0.1626841403952014 FLET(ph)DS(ph)EEEQEEVNEK ddPTM_KYSE-520_SHP099_60min_R1 2 FLETDSEEEQEEVNEK 16 0 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 2 FLET(1)DS(1)EEEQEEVNEK;FLET(1)DS(1)EEEQEEVNEK 253.1 2.2706999999999998e-23 387710000.0 1566400.0 1510410.0 1347050.0 1490030.0 1469480.0 1441500.0 1479820.0 1481260.0 1736270.0 1479310.0 True False 1479508.6694590154 1437847.6364283694 1433882.9983562047 1631642.003206144 1585119.7158025187 1432503.063802724 1629414.6472514302 1476121.854788682 1421007.1358048609 1466204.4642857632 1.0090739085150262 0.9806597043262945 0.9779556898666903 1.1128338802330484 1.0811041395748873 0.9770145288028049 1.1113147497100087 1.00676398875088 0.9691739252049546 1.0 20.483654872688458 FLGDIEVWDQAEK ddPTM_KYSE-520_SHP099_60min_R1 2 FLGDIEVWDQAEK 13 0 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 0 ; 237.68 6.4623999999999995e-15 160591000.0 138136.0 187091.0 153887.0 94484.0 165903.0 191875.0 126740.0 148271.0 155969.0 159867.0 False True 130473.32071271093 178102.86753068352 163806.8022479057 103463.73095234949 178958.62224105475 190677.43695258265 139552.11606320128 147756.68250771143 127648.96125853047 158450.70275464398 0.8234316316964831 1.1240269966266436 1.033802939337893 0.6529711080711322 1.129427759737782 1.2033865021592285 0.8807289184402888 0.9325088493706973 0.8056067851979865 1.0 17.273674532758356 FLGFFMVPAQS(ph)S(ph)WNYNFMGVRHDPNMKYELQLANPK ddPTM_KYSE-520_SHP099_60min_R1 1 FLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLANPK 36 2 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 2 FLGFFMVPAQS(0.595)S(0.595)WNY(0.401)NFMGVRHDPNMKY(0.409)ELQLANPK 46.645 0.054491 317310000.0 134250.0 135780.0 116710.0 106530.0 121230.0 139240.0 126540.0 138920.0 150820.0 115260.0 True False 126802.88487926006 129256.92499006502 124233.31334260243 116654.57917058762 130770.11129565485 138370.95151154432 139331.8981113891 138438.11894417176 123434.88986280325 114238.88607092315 1.1099800535566915 1.1314617065665205 1.0874870861877488 1.0211459791210213 1.144707514168762 1.211242128408353 1.219653857836879 1.2118300843569583 1.0804980169902123 1.0 16.80169429144631 -5.981867430580156 24.749339577751247 1.1642836660785814 1.0896891473485946 0.1084535035593791 0.0695704374765482 347.85560501292247 474789.43505497096 0.021239802526428226 0.024079891391012777 1.0426356478248297e-06 5.981867430580156 -0.07459451872998679 FLGS(ph)DEEDKDSLQELSTEQK ddPTM_KYSE-520_SHP099_60min_R1 9 FLGSDEEDKDSLQELSTEQK 20 1 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 FLGS(1)DEEDKDSLQELSTEQK;FLGS(0.999)DEEDKDS(0.001)LQELSTEQK;FLGS(1)DEEDKDSLQELSTEQK;FLGS(1)DEEDKDSLQELSTEQK;FLGS(1)DEEDKDSLQELSTEQK;FLGS(1)DEEDKDSLQELSTEQK;FLGS(1)DEEDKDSLQELSTEQK;FLGS(1)DEEDKDSLQELSTEQK;FLGS(1)DEEDKDSLQELSTEQK 346.34 2.1871999999999994e-65 2348260000.0 3632750.0 3565880.0 3225650.0 3161990.0 3347740.0 3322510.0 3229500.0 3267390.0 3936150.0 3337650.0 True False 3431234.1157924132 3394569.772305002 3433580.5602224777 3462504.578913037 3611188.0919649913 3301772.9826674955 3555969.376882658 3256056.186704556 3221444.3822667613 3308081.0176524045 1.0372279570792995 1.0261446905898255 1.0379372639002458 1.0466807071642459 1.0916262548272437 0.9980931437436845 1.074934186287302 0.9842734108777154 0.9738106065349253 1.0 21.657563137066145 -7.282334959319879 24.148182248386824 0.9842814830960379 1.043785178371739 0.5415317665361037 0.024698722902236247 402.47625553005986 465121.96012614854 0.012995860875586622 0.006253743223544278 5.2199343460636644e-08 7.282334959319879 0.059503695275700985 FLHIMEDDS(ph)MEEKPLK ddPTM_KYSE-520_SHP099_60min_R1 2 FLHIMEDDSMEEKPLK 16 1 P29375-2;P29375 P29375-2 KDM5A Lysine-specific demethylase 5A 1 FLHIMEDDS(1)MEEKPLK;FLHIMEDDS(1)MEEKPLK 306.27 3.8105999999999997e-47 1004970000.0 1284620.0 1285500.0 1149070.0 1242330.0 1176230.0 1148320.0 1225380.0 1289000.0 1464930.0 1225890.0 True False 1213359.5677735198 1223742.6504251603 1223140.8907770035 1360400.6696798664 1268792.609166777 1141152.9089323226 1349253.3689563323 1284528.7598548622 1198935.639880098 1215029.5683279892 0.9986255473957169 1.0071710864692465 1.00667582309143 1.1196440853303047 1.044248339497426 0.9391976447969668 1.110469575496051 1.0571995886672219 0.9867542907041857 1.0 20.212559992259017 -5.043396670008694 24.997797793722665 1.0403836749151478 1.0039043508168959 0.07572900127081827 0.05126017828433005 1132.3951170496393 652292.3489921145 0.014093250929161397 0.024411678354587126 9.04905712812306e-06 5.043396670008694 -0.03647932409825194 FLHKHDLDLICR ddPTM_KYSE-520_SHP099_60min_R1 1 FLHKHDLDLICR 12 1 P62136-3;P62136;P62136-2;E9PMD7;F8VR82;F8VYE8;F8W0W8;P36873;P36873-2 P62136-3 PPP1CA;PPP1CC Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit 0 212.59 1.1692000000000002e-10 502340000.0 439930.0 496590.0 418520.0 312850.0 385410.0 348160.0 254900.0 246960.0 437460.0 203420.0 False True 415526.2059212877 472733.07100321393 445498.46885567665 342583.169938218 415739.57431707036 345987.0042966052 280667.7795842668 246103.3534008973 358028.29146918125 201617.85705836536 2.0609593415180436 2.344698420568793 2.209618112976528 1.6991707725523801 2.0620176227580873 1.7160533761473673 1.3920779819766544 1.2206426404465456 1.7757766930611578 1.0 17.621263896750072 -6.306967959300446 0.3364462587972436 1.045785314127607 2.463388449309347 0.7263591263084966 0.21783855756320195 0.9985484557512896 0.23911252263829494 0.2698132662710539 0.5204805541283313 4.932101899032892e-07 6.306967959300446 1.4176031351817402 FLIATGERPR ddPTM_KYSE-520_SHP099_60min_R1 2 FLIATGERPR 10 1 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9;E9PKD3 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic 0 ; 205.18 5.2409e-07 2218100000.0 1654750.0 1489180.0 1019630.0 930330.0 1525450.0 1488630.0 1052870.0 1184020.0 1297790.0 1141160.0 False True 1562957.7188376577 1417637.557495249 1085356.9812656813 1018748.2834860872 1645494.2363767782 1479338.9079907394 1159304.3746209776 1179912.9109723445 1062144.0506235736 1131050.2102090449 1.3818641336433561 1.2533816312480381 0.9596010605621846 0.9007100430119707 1.454837478941498 1.307933895982675 1.0249804687333117 1.043201177385634 0.9390777182449436 1.0 20.109231544992944 -6.8740055537858735 7.3003364842625365 1.0017643920744304 1.1970815463006976 0.279483344960755 0.1631093363369905 0.37253163527320055 22.43884530898306 0.07561055894265688 0.0508773328534316 1.3365784241859725e-07 6.8740055537858735 0.19531715422626728 FLIVAHDDGR ddPTM_KYSE-520_SHP099_60min_R1 9 FLIVAHDDGR 10 0 Q16658 Q16658 FSCN1 Fascin 0 ;;;;;;;; 147.12 0.00031035 4366670000.0 4113600.0 4081430.0 2794339.0 2394037.0 3939160.0 3909240.0 2882271.0 3170302.0 3173180.0 3329745.0 False True 3885410.4077417003 3885351.9764486738 2974466.563040479 2621565.556686533 4249149.481245499 3884840.983101048 3173639.080934191 3159304.9623160525 2597010.501358238 3300246.0498024113 1.177309312429697 1.177291607297369 0.9012863035525982 0.7943545775453587 1.2875250563514498 1.177136772372968 0.9616371122159815 0.9572937637498885 0.7869142064464325 1.0 21.654142157915523 -6.946077296279222 6.561938540234826 0.9144495783857958 1.0775783478260286 0.22775878954177686 0.14513894521521647 0.3474126428226124 31.921229783308995 0.06687022410840003 0.04462077292512139 1.1321988351264108e-07 6.946077296279222 0.1631287694402328 FLKPVELR ddPTM_KYSE-520_SHP099_60min_R1 2 FLKPVELR 8 1 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 0 ; 83.005 0.0083271 512590000.0 1052870.0 956350.0 657060.0 660400.0 1139200.0 1001880.0 728940.0 829220.0 829790.0 808100.0 False True 994465.2022556906 910405.5104893853 699415.1389331706 723164.2174434994 1228848.5588386564 995626.8952914841 802628.3689688329 826343.6293614031 679121.053303644 800940.8626922859 1.2416212589190307 1.1366700750279422 0.8732419227334134 0.9028933984122776 1.5342562929153094 1.2430716694173647 1.002106904960342 1.0317161576495526 0.8479041149440717 1.0 19.61133619990453 -6.9059337300734995 6.325847960997692 0.9667862728280803 1.1470174605702521 0.20410497710307618 0.17954617744090431 0.41605725171046604 23.236441977869863 0.08366961872116661 0.05607479654491883 1.2418417884374906e-07 6.9059337300734995 0.18023118774217184 FLKS(ph)PPLHK ddPTM_KYSE-520_SHP099_60min_R1 4 FLKSPPLHK 9 1 Q9NYF8-4;E9PJA7 Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 FLKS(1)PPLHK;FLKS(1)PPLHK;FLKS(1)PPLHK;FLKS(1)PPLHK 111.94 0.0005806 13591800000.0 9220500.0 8235800.0 7675100.0 7435400.0 8210600.0 8005000.0 7507700.0 7763900.0 9287800.0 7366400.0 True False 8709020.484388942 7840139.805812171 8169849.22659419 8142058.180465467 8856727.508076416 7955037.825696025 8266651.5840910105 7736968.843007883 7601369.646384717 7301139.42697248 1.19283032073259 1.0738241454270099 1.1189827708826448 1.1151763723873558 1.2130610018700854 1.089561143882263 1.132241298331005 1.0596933424425954 1.04112100890761 1.0 22.79969020007922 -7.554010976914597 1.2751996918036363 1.0037620183821159 1.1344527401588336 0.5819956585102661 0.04026334233526941 0.32007641755112887 0.944738483134649 0.036293588188004655 0.012193477953868692 2.792473259802053e-08 7.554010976914597 0.1306907217767177 FLKS(ph)S(ph)WVR ddPTM_KYSE-520_SHP099_60min_R1 1 FLKSSWVR 8 1 E5RJH9 E5RJH9 SQLE 2 FLKS(1)S(1)WVR 62.823 0.044134 618010000.0 181340.0 214010.0 149070.0 167970.0 221300.0 231240.0 176160.0 173390.0 163630.0 171410.0 True False 171280.70870767237 203728.63836444073 158679.29072043308 183933.81829797805 238715.05097524085 229796.7453858775 193967.97195592194 172788.55055953038 133918.91677662425 169891.4407549621 1.0081773863741261 1.199169525310476 0.934004032312019 1.0826550029866988 1.4051034585052726 1.3526093154823382 1.1417171524001961 1.017052711965324 0.7882617051307385 1.0 17.37425364484344 -7.4315926273982456 3.2796496617892164 0.8946110361195901 1.1668908429754405 0.3612055584843853 0.1425965306533637 0.2935004720075344 5.905585460432207 0.10479582925160118 0.041990183999060376 3.7017524509073526e-08 7.4315926273982456 0.2722798068558504 FLMECRNS(ph)PVTK ddPTM_KYSE-520_SHP099_60min_R1 1 FLMECRNSPVTK 12 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 FLMECRNS(0.63)PVT(0.37)K 173.25 2.6745e-06 493210000.0 491420.0 575660.0 617780.0 364410.0 454280.0 399140.0 257050.0 305750.0 738550.0 348640.0 True False 464159.9529785175 548004.4295167245 657603.0872829487 399043.41683613806 490029.25150037184 396648.8192065341 283035.1225662447 304689.42461258615 604447.937330416 345551.3208378156 1.343244620952761 1.5858843432808936 1.9030547638728155 1.1548021748799189 1.418108460162324 1.1478723862054088 0.8190827396636899 0.8817486903937839 1.7492276859624956 1.0 18.398540468175533 -5.717257135347146 1.566552127104972 1.1079895518215377 1.5880565078586766 0.29358910215946565 0.29157234472043203 0.46722080695039103 2.3773975641473575 0.1070012304877642 0.15114753948612938 1.9175330791560977e-06 5.717257135347146 0.4800669560371389 FLMECRNSPVT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 FLMECRNSPVTK 12 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 FLMECRNS(0.032)PVT(0.968)K 202.92 7.4841e-08 473770000.0 385620.0 553530.0 530510.0 311220.0 396860.0 374140.0 281960.0 257170.0 678750.0 313560.0 True False 364228.88988558797 526937.5879345306 564707.5234460118 340798.2552282948 428090.62417548196 371804.8534798137 310463.2684644166 256277.93729392946 555506.1098950919 310782.10234598845 1.1719751141914154 1.69552102246834 1.8170529100074513 1.0965826302599946 1.377462282879134 1.1963522052048212 0.9989740918824956 0.8246225743354408 1.7874456273439334 1.0 18.245543897100802 -5.2765776175292345 24.773739376074314 1.17673871028784 1.574916827505787 0.2625728643323766 0.2902451615767875 888.9422776452421 1454752.9174265284 0.08065798887352313 0.12018357962151918 5.28959452617058e-06 5.2765776175292345 0.39817811721794705 FLMPEAYPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 FLMPEAYPSSPR 12 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 FLMPEAYPS(0.504)S(0.496)PR 152.47 1.4686e-05 1128100000.0 1580900.0 1691800.0 1253700.0 1315200.0 1454800.0 1510200.0 1324800.0 1429500.0 1764600.0 1510000.0 True False 1493204.3255539823 1610523.3885564283 1334515.5079909246 1440196.2125707006 1569284.4833202905 1500774.281619753 1458723.7128020285 1424541.3981478072 1444193.1219460464 1496622.5747622224 0.9977160245569708 1.0761052356919727 0.8916847376854163 0.9622975336981759 1.0485505896966791 1.0027740506708516 0.9746770745014219 0.9518374386235173 0.9649681531601207 1.0 20.51327901104679 -4.728165858187518 24.99999879360177 0.9760893468415651 1.036910573265088 0.2599540867511838 0.041994140258861855 274.3135815800182 206101.30815584116 0.01106613500811837 0.029274479700424617 1.86996785841283e-05 4.728165858187518 0.060821226423522945 FLMPEAYPS(ph)SPRK ddPTM_KYSE-520_SHP099_60min_R1 2 FLMPEAYPSSPRK 13 1 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 FLMPEAYPS(0.557)S(0.443)PRK;FLMPEAYPS(0.5)S(0.5)PRK 120.3 6.5428e-05 551900000.0 483290.0 489850.0 490920.0 432980.0 446250.0 465200.0 456290.0 422410.0 579580.0 409360.0 True False 456480.9402852701 466316.87072015944 522565.4886997728 474130.2890198157 481367.3361848227 462296.51424282184 502416.2461612601 420944.7583012349 474342.88202283153 405733.3888772604 1.1250761036660986 1.1493184527173 1.2879528848878041 1.168575971358488 1.1864129238090448 1.1394095899331385 1.2382915972272805 1.0374910466847878 1.1690999435255411 1.0 18.630172505069666 -8.212536875052917 0.6034428958321937 0.9991255820738969 1.1882438874651797 0.4308253329741283 0.06070942032554494 1.0141205249530498 0.8017528343138874 0.06547277854006779 0.02612025351962187 6.130037410508276e-09 8.212536875052917 0.18911830539128283 FLMPEAYPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 FLMPEAYPSSPR 12 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 FLMPEAYPS(0.097)S(0.903)PR;FLMPEAYPSS(1)PR;FLMPEAYPSS(1)PR 272.59 6.73e-22 3382440000.0 5777900.0 5770400.0 4972800.0 4926000.0 4836400.0 5509000.0 4905300.0 5075100.0 6026900.0 5327000.0 True False 5457388.369041902 5493181.322453017 5293354.644761325 5394165.558944097 5216997.164648232 5474616.2875402095 5401175.595114573 5057495.66263724 4932566.885785232 5279806.924343293 1.033634079284196 1.0404132956313104 1.0025659499697932 1.0216596243460225 0.988103777165512 1.0368970619548077 1.0229873312623787 0.9578940546706254 0.934232436236056 1.0 22.3320537423955 -7.262016741807933 24.999999994315775 0.9595474298042007 1.0203239652930673 0.5992175196511378 0.021207937502759427 32.342337079619675 1400358.6009596675 0.01057090790000413 0.005577375596274426 5.469948761428096e-08 7.262016741807933 0.060776535488866634 FLMPEAYPSS(ph)PRK ddPTM_KYSE-520_SHP099_60min_R1 1 FLMPEAYPSSPRK 13 1 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 FLMPEAYPS(0.384)S(0.616)PRK 135.72 9.6358e-06 383500000.0 280310.0 363400.0 302750.0 279320.0 247700.0 317220.0 250710.0 251460.0 333750.0 261730.0 True False 264760.6455158685 345941.7185254792 322265.74941712717 305866.48881937977 267192.58077978826 315240.11231321556 276054.21349380724 250587.74395120516 273149.41315283463 259411.27582285905 1.0206211918739503 1.3335646934704106 1.2422966133406967 1.179079389857529 1.0299960166814133 1.215213607478187 1.0641565699800688 0.965986320973653 1.0529589058393776 1.0 17.9848816649754 -6.650006217339373 0.7787920556052559 0.9934801001487585 1.2029973186206226 0.3712761606354674 0.09243854295857847 0.6733000522124654 0.8242523258363729 0.07370975242908454 0.049426812850244736 2.238689089371243e-07 6.650006217339373 0.2095172184718641 FLNRS(ph)PEES(ph)FDIK ddPTM_KYSE-520_SHP099_60min_R1 6 FLNRSPEESFDIK 13 1 F5H7T0;F6RJM5;Q96S38-2;Q96S38 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 2 FLNRS(1)PEES(1)FDIK;FLNRS(1)PEES(1)FDIK;FLNRS(1)PEES(1)FDIK;FLNRS(1)PEES(1)FDIK;FLNRS(1)PEES(1)FDIK;FLNRS(1)PEES(1)FDIK 165.74 5.6732e-07 1644720000.0 2673380.0 2415440.0 2241950.0 2188580.0 2273240.0 2124490.0 1953040.0 2241060.0 2734260.0 2165650.0 True False 2525082.282149095 2299398.6367506417 2386469.684246828 2396581.9851794266 2452131.055033695 2111230.26987045 2150472.3430335675 2233286.2859273357 2237787.309085455 2146464.025850205 1.1763916151117049 1.0712495569730593 1.1118144331822926 1.1165255770965696 1.142404915946549 0.9835852101151337 1.0018674047806484 1.0404489705075493 1.042545918373394 1.0 21.033530563138367 -6.258365676754014 24.999335429909703 1.0154786792022996 1.1197082167696992 0.771149287781861 0.029911593650926282 138.60978237989687 1127356.6278126242 0.010191236845167312 0.009776402948809442 5.516127847070547e-07 6.258365676754014 0.10422953756739961 FLNRS(ph)PEESFDIK ddPTM_KYSE-520_SHP099_60min_R1 3 FLNRSPEESFDIK 13 1 F5H7T0;F6RJM5;Q96S38-2;Q96S38 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 FLNRS(0.999)PEES(0.001)FDIK;FLNRS(1)PEESFDIK;FLNRS(1)PEESFDIK 151.39 3.5958999999999997e-06 2924050000.0 1665110.0 1480200.0 1310080.0 1165000.0 1336470.0 1360870.0 1188430.0 1110470.0 1601500.0 1235560.0 True False 1572743.0289855096 1409088.9701745035 1394529.8530021147 1275721.2497299786 1441642.5855258917 1352376.3055409053 1308568.102359082 1106618.038755647 1310707.970529635 1224613.8996511337 1.2842766437924236 1.1506393734187754 1.1387506326682937 1.041733439489299 1.177222131756454 1.1043287242829503 1.0685556506682352 0.9036464791644931 1.0703030325746161 1.0 20.22389553254408 -1.0000000000032554 0.22795217344274893 0.9803541325597486 2.5125836588625026 0.6126180132726553 0.06144436996872798 35.44966811705786 0.46161973173265075 0.09450650830023616 20.21605675953035 0.09999999999925041 1.0000000000032554 1.5322295263027539 FLPIS(ph)STPQPER ddPTM_KYSE-520_SHP099_60min_R1 6 FLPISSTPQPER 12 0 Q08AE8-5;Q08AE8-2;Q08AE8;J3KNG6;Q08AE8-4;Q08AE8-3 Q08AE8-5 SPIRE1 Protein spire homolog 1 1 FLPIS(0.488)S(0.488)T(0.023)PQPER;FLPIS(0.626)S(0.098)T(0.276)PQPER;FLPIS(0.433)S(0.433)T(0.134)PQPER;FLPIS(0.504)S(0.031)T(0.465)PQPER;FLPIS(0.333)S(0.333)T(0.333)PQPER;FLPIS(0.538)S(0.296)T(0.166)PQPER 174.21 1.5588999999999998e-06 2197900000.0 4128460.0 4959750.0 3865630.0 3401420.0 3404770.0 4245400.0 3341560.0 4804970.0 5040650.0 4933200.0 True False 3899446.093919024 4721476.165263475 4114814.6950266887 3724689.934125785 3672706.0285086804 4218902.88384883 3679357.495282865 4788302.680558427 4125395.024445951 4889495.685971521 0.7975149881217701 0.9656366358620355 0.8415621894978916 0.7617738460864816 0.7511420940703684 0.8628503131628295 0.7525024525206823 0.9793039994485675 0.8437260792114296 1.0 22.22125423923208 -7.947502479123394 0.9874450142837086 0.9913572184809044 0.8252775419612186 0.31610578568322345 0.07505511501233263 0.681854217904389 1.4996917635941942 0.07251264376627357 0.02460450861478538 1.1284894956483212e-08 7.947502479123394 -0.1660796765196858 FLPISST(ph)PQPER ddPTM_KYSE-520_SHP099_60min_R1 1 FLPISSTPQPER 12 0 Q08AE8-5;Q08AE8-2;Q08AE8;J3KNG6;Q08AE8-4;Q08AE8-3 Q08AE8-5 SPIRE1 Protein spire homolog 1 1 FLPIS(0.21)S(0.21)T(0.58)PQPER 143.31 0.00014402 489070000.0 384120.0 457250.0 408450.0 390750.0 371120.0 429010.0 361730.0 463440.0 535930.0 551320.0 True False 362812.09787576436 435283.0236537577 434779.34054310643 427886.7625167284 400325.03261604777 426332.38945682015 398297.1985445938 461832.4348077096 438618.6216958765 546435.7337204702 0.6639611494759259 0.7965859419370023 0.7956641810059923 0.7830504780560605 0.7326113720462404 0.7802059110484728 0.7289003517993631 0.8451724627583753 0.802690224355372 1.0 19.059692305018785 -8.648451500582787 0.6361008384285303 1.007406114036554 0.7565669660549479 0.7382208801358032 0.042915258653394246 1.137490873502918 0.7052970722637474 0.06097572816525503 0.016944425895761905 2.246717662009908e-09 8.648451500582787 -0.2508391479816061 FLPISST(ph)PQPERR ddPTM_KYSE-520_SHP099_60min_R1 3 FLPISSTPQPERR 13 1 Q08AE8-5;Q08AE8-2;Q08AE8;J3KNG6;Q08AE8-4;Q08AE8-3 Q08AE8-5 SPIRE1 Protein spire homolog 1 1 FLPIS(0.036)S(0.174)T(0.79)PQPERR;FLPIS(0.002)S(0.026)T(0.972)PQPERR;FLPISS(0.001)T(0.999)PQPERR 177.88 5.0975e-07 922090000.0 505850.0 523980.0 507790.0 425620.0 459120.0 456880.0 415150.0 499870.0 632300.0 521410.0 True False 477789.49211302574 498807.21428998554 540522.9558927271 466070.79683268117 495250.13196453906 454028.44244896935 457117.41347355227 498136.0676405349 517490.25898588035 516790.71305084194 0.9245318850496076 0.9652015829489429 1.0459223477561803 0.901855983597811 0.9583185600237678 0.8785537955367668 0.8845310140636776 0.9639029012340788 1.0013536348803729 1.0 18.979220618857426 -7.602728234689048 4.439948895415524 0.9991644700344048 0.9385607605118107 0.23476181477398783 0.045564699766978904 0.35859416341341177 12.966981371769332 0.03649264849038662 0.012718853336693953 2.4961562399262583e-08 7.602728234689048 -0.060603709522594085 FLPLFDR ddPTM_KYSE-520_SHP099_60min_R1 4 FLPLFDR 7 0 P61604;B8ZZL8;S4R3N1 P61604 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial 0 ;;; 139.27 0.012813 7654320000.0 834871.0 922122.0 675500.0 625109.0 1009719.0 967712.0 784753.0 667815.0 742034.0 672637.0 False True 788559.041355923 877821.8749866592 719043.8108382137 684519.1714141262 1089178.1407847686 961672.15045346 864083.4916912214 665498.505634192 607299.3307549092 666677.9594836675 1.1828185260041455 1.3167105084237667 1.0785474464989104 1.0267613645788987 1.6337395368947272 1.4424837911219703 1.296103282551056 0.9982308491938312 0.910933565623279 1.0 19.346630506532666 -7.295410881186392 5.056734334450639 0.9593226158047514 1.2862698348382577 0.43079796000933546 0.16491719019067536 0.21127819242349688 14.411525148365161 0.10064154303347124 0.04841843798169173 5.065112768239969e-08 7.295410881186392 0.3269472190335063 FLPLNIRNS(ph)PFTR ddPTM_KYSE-520_SHP099_60min_R1 3 FLPLNIRNSPFTR 13 1 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 FLPLNIRNS(0.999)PFT(0.001)R;FLPLNIRNS(0.999)PFT(0.001)R;FLPLNIRNS(1)PFTR 180.1 1.1815e-07 1358134000.0 709450.0 737800.0 853490.0 497165.0 708450.0 595531.0 467734.0 482073.0 873050.0 489835.0 True False 670095.3942464873 702354.9805396228 908507.3310322842 544415.4121218922 764200.9844708971 591814.0701279918 515017.1173639373 480400.80127968406 714526.1277994988 485495.44298586325 1.3802300390819513 1.4466767725357912 1.8712993997324467 1.121360498820881 1.5740641761145207 1.2189899589752162 1.0608073150934472 0.9895063037567429 1.4717463121900087 1.0 18.889098228551823 -6.405965127677025 4.484998534506327 1.1304432473263675 1.477985283361412 0.37632632935056654 0.21471688725866725 0.2522987721115042 8.148655731590631 0.076675495580679 0.06659551967215019 3.926764646759657e-07 6.405965127677025 0.3475420360350445 FLQDYFDGNLK ddPTM_KYSE-520_SHP099_60min_R1 2 FLQDYFDGNLK 11 0 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ; 183.33 8.5856e-06 578950000.0 783230.0 883800.0 574520.0 626450.0 908640.0 1018350.0 812400.0 884280.0 709770.0 787620.0 False True 739782.670569704 841340.9213891542 611554.4784645024 685987.6196509391 980144.7985456081 1011994.0999122466 894525.3202599378 881212.6390725028 580893.6598456559 780642.2995590878 0.9476589610728734 1.077754717960261 0.7833991045705729 0.8787476928144807 1.2555619892737053 1.2963608306696008 1.1458837431243116 1.1288302460297346 0.7441227053334781 1.0 19.574302112605363 -4.2470969892028085 21.754486587386182 1.044398952126521 0.9476585680164772 0.018459856918178086 0.17728885688045723 2153.8334243451727 3266566.9934791666 0.04773115362374377 0.8224090605669337 5.661128472630083e-05 4.2470969892028085 -0.09674038411004371 FLQDYFDGNLKR ddPTM_KYSE-520_SHP099_60min_R1 3 FLQDYFDGNLKR 12 1 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ;; 180.28 1.4236000000000002e-06 5551880000.0 4495620.0 4020460.0 3275490.0 2778374.0 5054720.0 4103220.0 2842400.0 3102020.0 3820630.0 3032490.0 False True 4246238.996803719 3827311.0667665093 3486633.3263692977 3042429.8296113936 5452497.706577353 4077610.2819678267 3129737.531150728 3091259.8166369097 3126899.9022445395 3005624.4978415226 1.4127643023448666 1.2733829756561665 1.1600362350231075 1.0122454856873513 1.814098105233386 1.3566599170642062 1.0412935925290523 1.0284916891171487 1.0403494862681983 1.0 21.519233349389893 -6.765784591195549 22.494809693749662 1.029907684450999 1.3339693258272187 0.3811874052141673 0.19385870270446737 37.755585142697356 195447.23198772146 0.08399913338127953 0.05902880654887727 1.7148076362288065e-07 6.765784591195549 0.3040616413762198 FLQEFYQDDELGKK ddPTM_KYSE-520_SHP099_60min_R1 1 FLQEFYQDDELGKK 14 1 P33993;P33993-2 P33993 MCM7 DNA replication licensing factor MCM7 0 187.37 2.6763e-10 794700000.0 379740.0 360970.0 245300.0 225630.0 361110.0 343710.0 294210.0 283910.0 287370.0 308730.0 False True 358675.06520707736 343628.45937298407 261112.430493877 247073.80736186702 389527.3025651565 341564.7783972487 323951.6180128958 282925.1824750925 235190.8520081802 305994.8923883057 1.172160301133134 1.1229875658738826 0.853322839658797 0.8074442205013403 1.272986289166058 1.1162433978270625 1.0586830893955026 0.9246075327167949 0.7686103848744129 1.0 18.22314804634964 -7.359353304773618 4.109507846766566 0.8748261846645987 1.0532753287174148 0.21318147824102174 0.14112337244367174 0.3883392667448523 11.516194679310109 0.09026476631911172 0.040447175353721776 4.371663194049662e-08 7.359353304773618 0.1784491440528161 FLREPVVTPQDLEGPGRAES(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 FLREPVVTPQDLEGPGRAESK 21 2 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 FLREPVVTPQDLEGPGRAES(1)K 117.08 6.8636e-05 326830000.0 222520.0 242670.0 242720.0 162100.0 197060.0 155520.0 112620.0 136790.0 304690.0 144100.0 True False 210176.37201737752 231011.76894490412 258366.1195657312 177505.93526285805 212567.50088197432 154549.3419927852 124004.72866528094 136315.50741702603 249365.9766098496 142823.3861081037 1.471582334970647 1.6174645850368665 1.8089902963802627 1.242835225377607 1.4883241930777427 1.082101091454351 0.8682382629650103 0.9544340820616602 1.7459744052077248 1.0 17.123872702121737 -5.810940741506042 1.494303595171515 1.121248350638502 1.6107040255334846 0.3666433740556826 0.25939886386005373 0.4201015370286373 1.952140075313178 0.09977013232871289 0.13099392050684752 1.5454653003763725e-06 5.810940741506042 0.48945567489498254 FLRLS(ph)QS(ph)P ddPTM_KYSE-520_SHP099_60min_R1 1 FLRLSQSP 8 1 A0A0B4J1Z1 A0A0B4J1Z1 SRSF7 2 FLRLS(1)QS(1)P 77.813 0.045004 408210000.0 558570.0 562840.0 523320.0 492580.0 483200.0 490710.0 497000.0 466080.0 585500.0 556110.0 True False 527585.008618311 535800.3215599366 557054.0445416048 539394.6551004231 521225.0909680814 487647.29687036737 547241.6102525716 464463.2772638893 479187.9592538869 551183.2980470331 0.9571861311612014 0.9720909966945627 1.0106511690673012 0.9786121187119061 0.9456474693897648 0.8847279999198303 0.9928486806323272 0.8426657319073121 0.8693804056686006 1.0 19.07217264660494 -5.9484134080555595 3.3983157565218143 0.9126384592567193 0.9812214661122615 0.2621371794829037 0.04817933520016153 0.30805632199322464 7.326421578327405 0.01582228099619261 0.01773746246645988 1.1261249793020123e-06 5.9484134080555595 0.0685830068555422 FLRPHYGK ddPTM_KYSE-520_SHP099_60min_R1 1 FLRPHYGK 8 1 Q13200;C9JPC0;H7C2Q3 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 127.12 0.00084212 2051300000.0 5628300.0 5249100.0 4143500.0 3917200.0 4414500.0 5094500.0 3978200.0 4596500.0 4584400.0 2953100.0 False True 5316086.979262113 4996925.3569402695 4410596.639834408 4289489.510250873 4761896.034930867 5062703.335791179 4380355.279490503 4580555.814331162 3751988.523319416 2926937.831477033 1.8162623483463034 1.7072195053827468 1.5068979574494992 1.4655212229383943 1.6269207988363221 1.7296928145673547 1.4965658759072533 1.5649651882150353 1.2818818640319511 1.0 21.48096067237446 -7.979790574868442 1.4040865974253505 0.9974335788508822 1.6232081657828195 0.7862993099731055 0.10450287293405329 0.2057416745077558 0.9164157441700785 0.10614408062599844 0.03199080240114365 1.0476336152937728e-08 7.979790574868442 0.6257745869319372 FLS(ph)PAQYLYK ddPTM_KYSE-520_SHP099_60min_R1 2 FLSPAQYLYK 10 0 Q8TC05-4;Q8TC05 Q8TC05-4 MDM1 Nuclear protein MDM1 1 FLS(1)PAQYLYK;FLS(1)PAQYLYK 153.75 0.00012499 143240000.0 532370.0 585560.0 511870.0 427380.0 458330.0 528820.0 432700.0 486090.0 589750.0 405380.0 True False 502838.37484671606 557428.8186565216 544865.9592209575 467998.0667035173 494397.9634590248 525519.4382241814 476441.5387450463 484403.8672442587 482666.26638766925 401788.6485808672 1.2514997041921425 1.3873682609635225 1.3561009280512148 1.1647866816459456 1.2304926114892922 1.307949938556841 1.1858013919204933 1.205618598124142 1.2012939342424551 1.0 18.616077279753846 -13.999999970125977 0.09873277856464005 0.14253168169175254 1.441981797688529 0.6743665200036721 0.059226428443151354 113.66675577517856 0.7643422819277513 19.90602081169073 1.0871417824025205 1.0000000687874829e-14 13.999999970125977 1.2994501159967764 FLS(ph)PEFIPR ddPTM_KYSE-520_SHP099_60min_R1 3 FLSPEFIPR 9 0 P49406;A0A0A0MRF4 P49406 MRPL19 39S ribosomal protein L19, mitochondrial 1 FLS(1)PEFIPR;FLS(1)PEFIPR;FLS(1)PEFIPR 134.57 0.00049928 201726000.0 267908.0 240927.0 221877.0 220759.0 241402.0 242983.0 220809.0 224813.0 322765.0 230832.0 True False 253046.60917864233 229352.5052812005 236179.54643575184 241739.86898638663 260398.9640105067 241466.45296703276 243130.52860816964 224033.17617474886 264159.01224351977 228787.00806457835 1.1060357461697141 1.0024717190954415 1.0323118800919275 1.0566153691653337 1.1381719889313182 1.0554203012212804 1.062693772102403 0.9792215828597766 1.154606699384596 1.0 17.803645603769123 -5.517031226157576 24.92947860432676 1.0664757216328102 1.0428214113882976 0.018951524901755445 0.05550752722335205 1031.7497953515053 4398603.531074056 0.015772149349579972 0.02106685708413543 3.040666391212017e-06 5.517031226157576 -0.02365431024451259 FLSHS(ph)TDS(ph)LNK ddPTM_KYSE-520_SHP099_60min_R1 2 FLSHSTDSLNK 11 0 Q12802-2;Q12802;Q12802-4;A8MYJ1;A0A087WTD7;A0A087WY36 Q12802-2 AKAP13 A-kinase anchor protein 13 2 FLSHS(0.934)T(0.068)DS(0.998)LNK;FLS(0.042)HS(0.915)T(0.042)DS(1)LNK 137.81 3.0935999999999997e-05 0.0 1268880.0 1317870.0 1316770.0 1687480.0 1371610.0 1173260.0 1164360.0 1267930.0 1579420.0 1308570.0 True False 1198492.6969504305 1254557.5470368 1401651.1011064935 1847857.5918406392 1479547.9036066441 1165937.2491413015 1282064.8718585197 1263531.8467670865 1292637.141938129 1296977.087852054 0.9240662060848545 0.9672935310788676 1.0807061390944013 1.4247418933983698 1.1407664155863761 0.8989651860945594 0.9885023288898414 0.974212928356077 0.9966537990882225 1.0 20.306721562765606 -6.249350981032003 24.33262014033931 0.9711073733513629 1.1158591251414758 0.21916868425067904 0.12772042447300955 905.1468254580798 1821960.5926805201 0.047277477342463646 0.04691210076673956 5.631823283513004e-07 6.249350981032003 0.1447517517901129 FLSHS(ph)TDSLNK ddPTM_KYSE-520_SHP099_60min_R1 4 FLSHSTDSLNK 11 0 Q12802-2;Q12802;Q12802-4;A8MYJ1;A0A087WTD7;A0A087WY36 Q12802-2 AKAP13 A-kinase anchor protein 13 1 FLS(0.016)HS(0.852)T(0.132)DSLNK;FLS(0.001)HS(0.996)T(0.003)DSLNK;FLS(0.004)HS(0.866)T(0.13)DSLNK;FLS(0.001)HS(0.979)T(0.02)DSLNK 192.18 4.806600000000001e-07 3753140000.0 3171310.0 4372610.0 3985790.0 8223200.0 4014490.0 3532750.0 3753880.0 3683880.0 4998940.0 3615520.0 True False 2995391.1124502495 4162543.2521785805 4242720.4008894805 9004730.455604773 4330407.523676431 3510700.7968429285 4133358.8247382804 3671101.480104059 4091258.509022423 3583489.305631997 0.8358867173797723 1.1615894166717653 1.1839634610382126 2.512838657409267 1.2084332209030284 0.9796878119115159 1.15344527978417 1.0244488449663758 1.1416968658431295 1.0 21.772933618346425 -5.990529652940156 24.99987103729179 1.0702138171569717 1.4468535558942601 0.14727409617317289 0.410773443466692 420.74011098381914 1110664.2303902148 0.13509788069085485 0.15299651639780282 1.0220457745490838e-06 5.990529652940156 0.3766397387372884 FLSHST(ph)DS(ph)LNK ddPTM_KYSE-520_SHP099_60min_R1 1 FLSHSTDSLNK 11 0 Q12802-2;Q12802;Q12802-4;A8MYJ1;A0A087WTD7;A0A087WY36 Q12802-2 AKAP13 A-kinase anchor protein 13 2 FLSHS(0.077)T(0.923)DS(1)LNK 184.21 2.5434e-06 527120000.0 1322900.0 1352900.0 1268400.0 1778900.0 1454200.0 1171100.0 1264300.0 1399700.0 1584300.0 1364100.0 True False 1249516.099864231 1287904.6532556983 1350163.0935117553 1947966.1211542145 1568637.2667338229 1163790.7305025125 1392107.7823789273 1394844.7673924344 1296631.0569529182 1352015.135253742 0.9241879526960514 0.9525815352754822 0.9986301619754877 1.4407872148477288 1.1602216763937527 0.860782324218653 1.029653992828757 1.0316783673658019 0.959035903625125 1.0 20.366679871412686 -6.24155732998488 24.936933279141556 0.9815489913673349 1.1011791390071206 0.14747966666461365 0.1424787757376123 1806.2858382705588 2265524.0641650003 0.05204808092310694 0.05198206332700249 5.733801712569948e-07 6.24155732998488 0.11963014763978574 FLSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 FLSSPR 6 0 Q6ZU80;H0YJH2 Q6ZU80 CEP128 Centrosomal protein of 128 kDa 1 FLS(0.135)S(0.865)PR 74.191 0.034616 216540000.0 457950.0 459070.0 420930.0 384050.0 387070.0 416120.0 385460.0 424290.0 514980.0 408000.0 True False 432546.6005993083 437015.58812188206 448063.8213118126 420549.99653115735 417530.2068729618 413522.840728123 424426.05852707557 422818.23702003073 421472.61358935374 404385.43741919665 1.0696394097666753 1.0806907165375002 1.108011762667254 1.0399731484277068 1.0325055460395793 1.022595777353511 1.0495582166256503 1.0455822536995223 1.042254677317779 1.0 18.625371518805846 -5.351010149250568 6.681814655469286 1.0350104458156173 1.0854155080180574 0.6964166863363337 0.015989773350234805 0.13851760232441576 8.712801596877618 0.004463218973094729 0.006654122106494205 4.456458337496779e-06 5.351010149250568 0.05040506220244012 FLT(ph)PEEPFPLLGPPR ddPTM_KYSE-520_SHP099_60min_R1 1 FLTPEEPFPLLGPPR 15 0 Q6PEV8-2;Q6PEV8 Q6PEV8-2 FAM199X Protein FAM199X 1 FLT(1)PEEPFPLLGPPR 114.56 0.00080575 15748000.0 15913.0 16559.0 12160.0 11375.0 12450.0 18056.0 11543.0 15080.0 17853.0 14121.0 True False 15030.274168220963 15763.480784434265 12943.853056687904 12456.076579981545 13429.744169190002 17943.305806466873 12709.879088823825 15027.690999698465 14611.345237505802 13995.898925971762 1.0739055953261953 1.1262928424827687 0.9248318471826337 0.8899804611240215 0.9595485249088814 1.282040253460964 0.9081145238365855 1.0737210292232133 1.0439733321017328 1.0 13.772716530582674 -4.730698838639886 24.99536632195495 1.0128583175770023 1.1000992789668502 0.10028984934085095 0.10739168126001306 518.1015494893403 421265.05030018603 0.0281424347295952 0.07443953055812379 1.8590931957431664e-05 4.730698838639886 0.08724096138984794 FLT(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 1 FLTPLK 6 0 A0A0B4J1W3;Q9BXJ9;A0A0A0MTS7;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12;A0A0A0MRA3;Q8WZ42-3;Q8WZ42-10;Q8WZ42-9 A0A0B4J1W3;A0A0A0MTS7 NAA15;TTN N-alpha-acetyltransferase 15, NatA auxiliary subunit;Titin 1 FLT(1)PLK 94.302 0.06637 408160000.0 873550.0 980080.0 738870.0 601750.0 686030.0 958610.0 646490.0 868640.0 1001500.0 937530.0 True False 825092.4401212485 932995.4856699283 786498.7424337986 658940.139077266 740016.6580232459 952626.959411675 711843.5183343772 865626.8905821005 819652.845760493 929224.2135873028 0.8879368704092956 1.0040585168008767 0.8464036245864628 0.7091293247013057 0.796381160975547 1.025185251828539 0.7660621709224302 0.9315586894150308 0.8820829610070041 1.0 19.82566722260762 -8.489486304840268 0.8675181249253574 1.0004340621479269 0.8650125469022708 0.148671995205793 0.09393904437893535 3.4986482019558403 4.183080141823844 0.09958484274392446 0.03250205147208174 3.2397663864076908e-09 8.489486304840268 -0.13542151524565604 FLVHNVK ddPTM_KYSE-520_SHP099_60min_R1 2 FLVHNVK 7 0 D3YTB1;F8W727;P62910 D3YTB1 RPL32 60S ribosomal protein L32 0 ; 103.29 0.0075547 2680900000.0 8142500.0 6888700.0 4853700.0 4285700.0 6913100.0 6140700.0 4761800.0 5666200.0 5172300.0 5036200.0 False True 7690819.2933286615 6557756.511850501 5166577.268194578 4693011.639457311 7457121.639841557 6102373.613522986 5243169.214689532 5646545.274701025 4233140.703072386 4991583.186104312 1.540757512513975 1.3137628418386655 1.0350578314666614 0.9401850003265153 1.4939391695606457 1.2225326887290828 1.0504020506531058 1.1312132973001456 0.8480557260583584 1.0 22.251066038691334 -4.4890481990118065 3.15409045257371 1.1079591106973232 1.5305181167568516 0.4186632504311887 0.16768204178098117 0.27964159016251466 5.195909175935865 0.04545584413214039 0.21888328480789404 3.243036233815591e-05 4.4890481990118065 0.42255900605952834 FLWESYR ddPTM_KYSE-520_SHP099_60min_R1 2 FLWESYR 7 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 178.84 0.0022132 1296380000.0 1354720.0 1330050.0 820750.0 701140.0 1253650.0 1090470.0 939530.0 778880.0 770800.0 843830.0 False True 1279570.9810326325 1266152.4015542483 873656.8582464305 767776.1347945724 1352305.122707232 1083663.9722406925 1034506.8613291727 776178.2470719586 630842.1502867568 836354.3226898058 1.5299388624158647 1.5138947300256254 1.04460135440761 0.9180034274532372 1.6169045654694205 1.295699613000758 1.2369241519576142 0.9280495431358393 0.7542761879413744 1.0 19.673754746038647 -7.246152139858243 3.1109297099242186 0.8648611416895837 1.308850955953683 0.45414663114980147 0.20967407328709664 0.2570050333085958 5.067777827260073 0.1320817166193429 0.06256421961841332 5.67345820857969e-08 7.246152139858243 0.4439898142640992 FMDQHPEMDFSK ddPTM_KYSE-520_SHP099_60min_R1 4 FMDQHPEMDFSK 12 0 Q9Y266 Q9Y266 NUDC Nuclear migration protein nudC 0 ;;; 153.39 2.2175e-05 1701720000.0 3495180.0 3462150.0 2039550.0 2204020.0 3434650.0 3542140.0 2516800.0 2774360.0 2597800.0 2821220.0 False True 3301295.397931411 3295823.117206899 2171022.656395383 2413489.3981372267 3704937.414514737 3520032.190369878 2771222.7056009513 2764736.392700494 2126105.0052087912 2796226.185675948 1.180625306651783 1.1786682830202382 0.7764116749627568 0.8631238096905955 1.3249777265851337 1.258851021566755 0.9910581339223986 0.9887384671752361 0.7603480062163983 1.0 21.415049633812497 -7.308764462303198 2.5965827841727087 0.8864912227792495 1.085168771213364 0.18325742261837186 0.16982313542969954 0.5565572576038427 7.239685598311379 0.12436662399376151 0.05218935366018919 4.911741900846475e-08 7.308764462303198 0.19867754843411445 FMEQSRS(ph)PSVS(ph)PSKQPVSTSSK ddPTM_KYSE-520_SHP099_60min_R1 1 FMEQSRSPSVSPSKQPVSTSSK 22 2 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 2 FMEQS(0.186)RS(0.812)PS(0.01)VS(0.895)PS(0.097)KQPVSTSSK 135.3 1.1173e-06 733150000.0 979150.0 980490.0 778740.0 755720.0 744870.0 783170.0 617680.0 648240.0 1072200.0 692700.0 True False 924834.5976128657 933385.7886545056 828938.8264280548 827543.4015844963 803487.0312694428 778281.9455278397 680121.1223758729 645991.406740353 877515.5079624553 686563.2169124455 1.3470494410870921 1.3595045083423634 1.2073743626346443 1.2053418843293922 1.1703030565529235 1.133591090166269 0.9906168953158554 0.9409059367401758 1.2781277620853975 1.0 19.38903304044226 -5.266948282348238 0.6415382858054411 1.0478027659002784 1.4077146674720584 0.5863192782949517 0.09005272773460948 0.8770710463200958 0.6016195538409439 0.052416495554116434 0.19775782677116552 5.408187221267409e-06 5.266948282348238 0.35991190157178 FMEQSRS(ph)PSVSPSK ddPTM_KYSE-520_SHP099_60min_R1 3 FMEQSRSPSVSPSK 14 1 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 1 FMEQS(0.006)RS(0.961)PS(0.032)VSPSK;FMEQS(0.007)RS(0.972)PS(0.021)VSPSK;FMEQS(0.006)RS(0.993)PS(0.002)VSPSK 153.75 1.0526999999999999e-06 2589750000.0 3102650.0 2946310.0 2727990.0 2090930.0 2330650.0 2361030.0 2090500.0 2149590.0 3005320.0 2173780.0 True False 2930539.819520565 2804764.8450985276 2903840.6003383305 2289651.3585389704 2514058.895415476 2346293.9359903927 2301828.141313889 2142133.5740080755 2459629.6459519966 2154522.000375246 1.3601809677553363 1.3018037618599536 1.3477887901968872 1.062718950254483 1.1668754809547597 1.0890090403262285 1.0683706831088229 0.9942500348731584 1.1416126850984165 1.0 21.03893639957577 -5.261271396660069 24.999822970669854 1.0786256556749279 1.3331124453471714 0.8397948320390858 0.05239368021538752 5.662364545079024 842643.4126248463 0.014480653272962832 0.023175278902541004 5.479344460559087e-06 5.261271396660069 0.2544867896722436 FMERDPDELR ddPTM_KYSE-520_SHP099_60min_R1 4 FMERDPDELR 10 1 A0A087WTB8;Q5TBK7;P15374 A0A087WTB8 UCHL3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3 0 ;;; 181.53 1.0684000000000001e-05 1938400000.0 1870600.0 1835260.0 1263620.0 988560.0 1716180.0 1835730.0 1245370.0 1291100.0 1453980.0 1403690.0 False True 1766834.0890513512 1747091.3548185786 1345074.9670634835 1082512.4451785972 1851233.6022715278 1824272.5281405293 1371264.1532399303 1286621.4754450044 1189973.883853062 1391254.3986542933 1.2699575942116277 1.2557669945255683 0.9668073418955747 0.7780837539314663 1.3306219222466822 1.3112429544913409 0.985631495265209 0.9247923864172533 0.8553244359939332 1.0 20.407954818190028 -6.982548488459423 23.324439903830545 0.9250773800378351 1.1402332841494847 0.2881726299188814 0.163516472814966 159.7715588024403 213537.78193127498 0.07534688728454426 0.0507810580002287 1.0410018745207221e-07 6.982548488459423 0.21515590411164953 FMLQDVLDLR ddPTM_KYSE-520_SHP099_60min_R1 1 FMLQDVLDLR 10 0 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;H7C044 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 108.67 0.006196 25031000.0 48569.0 62825.0 56657.0 38028.0 62052.0 59401.0 46573.0 43702.0 54915.0 45509.0 False True 45874.78075009891 59806.79269775246 60309.20087440521 41642.16968646487 66935.13937241603 59030.25632531782 51281.05334867815 43550.40796212347 44943.820294495665 45105.82566546626 1.0170477997750382 1.325921692273588 1.337060124377213 0.923210451689986 1.4839577456989694 1.308705814701721 1.1369053241373153 0.965516256927015 0.9964083271156118 1.0 15.461026157063381 -7.0736397149811765 3.696976280459085 0.9877289721625805 1.2386232194878055 0.33953657752367983 0.1524866167781334 0.2758805669770175 7.2096281692376065 0.07625286333117799 0.042882076221456 8.440346675209239e-08 7.0736397149811765 0.25089424732522503 FMQASEDLLK ddPTM_KYSE-520_SHP099_60min_R1 2 FMQASEDLLK 10 0 Q32Q12;P22392-2;J3KPD9;E7ERL0;P15531;P15531-2;E5RHP0 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 125.75 0.0023434999999999997 0.0 715000.0 840690.0 587200.0 456310.0 803990.0 802460.0 547500.0 745280.0 682110.0 711850.0 False True 675337.5246828364 800301.9904985834 625051.8515532186 499677.56520539563 867259.4389226561 797451.549482576 602846.6430850775 742694.7976296603 558256.0185937979 705543.5628109201 0.9571875647086321 1.1343055662079051 0.8859153204700521 0.7082164610993767 1.2292074999131906 1.1302655023957557 0.8544428365036838 1.0526561884722299 0.7912424519468063 1.0 19.428375637218267 -6.790536186837993 24.99753502951229 0.9289734732107606 1.004224680707663 0.06585483498535138 0.15235549091065542 789.4270396668064 678202.2636325122 0.06648776792074378 0.044834243811609435 1.6198090204900955e-07 6.790536186837993 0.07525120749690228 FMRDPIR ddPTM_KYSE-520_SHP099_60min_R1 2 FMRDPIR 7 1 P60842;P60842-2;J3KT12;J3QS69;J3KSZ0;Q14240-2;Q14240;E7EQG2;J3KTB5;J3KTN0 P60842 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 ; 140.98 0.0018006 1469210000.0 1064070.0 910310.0 634050.0 595370.0 914550.0 759960.0 624390.0 652150.0 639830.0 674280.0 False True 1005043.915929044 866577.3411968333 674921.8775158699 651953.7857954826 986519.8819223059 755216.807747152 687509.4346591617 649887.8438629544 523653.000801733 668306.4037819012 1.5038669542017968 1.296676698431932 1.009898863300624 0.9755312564807396 1.4761490782366529 1.1300457446964904 1.0287338723205282 0.9724399469843212 0.7835522715904197 1.0 19.350150172744982 -6.887547487842253 1.9957948009107054 0.908436886969325 1.2298039324505319 0.4260821443889381 0.16874555330027652 0.36505271428070285 2.939349426639904 0.09810052559439719 0.056378123505253355 1.2955450286627517e-07 6.887547487842253 0.32136704548120687 FMS(ph)SPSLSDLGK ddPTM_KYSE-520_SHP099_60min_R1 1 FMSSPSLSDLGK 12 0 B1AHC3;B1AHC4;F8WEZ7;E9PH80;P85299;P85299-5 B1AHC3;P85299 PRR5-ARHGAP8;PRR5 Proline-rich protein 5 1 FMS(0.968)S(0.03)PS(0.002)LSDLGK 82.069 0.0081545 0.0 632470.0 632000.0 510710.0 516580.0 648190.0 512870.0 550940.0 574350.0 658420.0 496360.0 True False 597385.628302313 601637.7713486595 543631.1837648917 565675.6078845599 699198.8653033959 509668.98809053353 606634.3918562423 572357.7139042973 538867.5254174974 491962.6365622364 1.2142906471043353 1.2229338706549284 1.1050253481925123 1.1498344911666851 1.4212438371118916 1.0359912526122441 1.2330903746986062 1.163417038952084 1.0953423804356883 1.0 18.908189224771114 -7.978102792415749 1.5151259198316114 0.9997800896539277 1.197232837761556 0.30535353307159174 0.09452462310896327 0.5055029733595119 2.6261362472696006 0.08794577931755973 0.026031237711275433 1.0517129162361233e-08 7.978102792415749 0.19745274810762825 FMSVQRPGPYDRPGTAR ddPTM_KYSE-520_SHP099_60min_R1 1 FMSVQRPGPYDRPGTAR 17 2 P52597 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed 0 66.809 0.014481 262990000.0 277530.0 173900.0 159350.0 115360.0 171280.0 223010.0 143050.0 207570.0 207740.0 199790.0 False True 262134.8576576614 165545.58297077843 169621.95596901473 126323.77971575123 184758.7615501098 221618.11186864052 157510.89003346182 206849.9881172021 170019.65269923574 198020.01603426778 1.323779600201115 0.8360042903043217 0.8565899516928697 0.6379343979746503 0.9330307372469706 1.119170255143748 0.7954291348315224 1.044591310816813 0.8585983180094959 1.0 17.59528674097336 -8.84538062521583 16.994600426754545 0.9999951427555579 0.9246510026783312 0.009565333965389056 0.18092967705773091 0.0 0.0 0.17331528942196098 0.04203513204830826 1.4276421931019814e-09 8.84538062521583 -0.07534414007722667 FNADEFEDMVAEK ddPTM_KYSE-520_SHP099_60min_R1 5 FNADEFEDMVAEK 13 0 X1WI28;P27635;F8W7C6;A0A087WV22 X1WI28 RPL10 60S ribosomal protein L10 0 ;;;; 208.74 3.0908e-10 701302000.0 1232901.0 1504060.0 1982230.0 796430.0 1508100.0 1647850.0 1202586.0 1354121.0 1686200.0 1727820.0 False True 1164509.523802788 1431802.6999599135 2110007.7174801365 872122.4677445897 1626778.8900847754 1637565.1569110781 1324155.12898833 1349423.8703052178 1380028.585642877 1712512.8590236185 0.6800004552764222 0.8360828897811894 1.2321120430495032 0.5092647702755507 0.9499367444237914 0.9562352471004092 0.7732234663296432 0.7879788249149765 0.8058500573418725 1.0 20.707683390436728 FNADEFEDMVAEKR ddPTM_KYSE-520_SHP099_60min_R1 6 FNADEFEDMVAEKR 14 1 X1WI28;P27635;F8W7C6;A0A087WV22 X1WI28 RPL10 60S ribosomal protein L10 0 ;;;;; 194.77 1.7037e-10 3331841000.0 1898950.0 2091890.0 1544678.0 1187520.0 1893170.0 1893280.0 1264579.0 1468708.0 1892040.0 1696930.0 False True 1793611.4580370248 1991392.4644090934 1644250.4154521853 1300381.5437590946 2042151.7083361803 1881463.337243445 1392414.9864217034 1463613.3947470237 1548493.2304470097 1681896.520391561 1.0664220041429513 1.1840160439510743 0.9776168720947164 0.7731638230967703 1.2141958102516013 1.1186558236088286 0.8278838617833255 0.8702160786956625 0.9206828194676959 1.0 20.68165751504185 -6.761512146406885 24.99999999999539 0.8938803585507618 1.052327442632203 0.26723143804098737 0.12188137440024037 2.8190314336043802 967720.9791570313 0.05166447035275354 0.03736594500316625 1.7317605959579293e-07 6.761512146406885 0.15844708408144115 FNAHHGDTK ddPTM_KYSE-520_SHP099_60min_R1 2 FNAHHGDTK 9 0 P53602 P53602 MVD Diphosphomevalonate decarboxylase 0 ; 115.78 0.00093957 738670000.0 706120.0 648680.0 313260.0 299180.0 588760.0 677220.0 408320.0 532370.0 452110.0 518970.0 False True 666950.1159846772 617516.4391114688 333453.24083372153 327613.97724825284 635092.0624138407 672993.2187779963 449596.9704191753 530523.3327260922 370018.22076562734 514372.32955255086 1.296629071328259 1.2005242188059424 0.6482721205547552 0.6369199088396572 1.234693287188102 1.308377570316484 0.874069121895178 1.031399440144051 0.7193587203407769 1.0 18.972453510005014 -4.545495569182784 24.44211179043785 0.9431174391980313 1.2726030682890839 0.2601546890394808 0.21576940206285303 223.06821655661807 241070.22993612316 0.059389742128750714 0.15715537970321797 2.847766853893198e-05 4.545495569182784 0.3294856290910526 FNDEHIPESPYLVPVIAPSDDAR ddPTM_KYSE-520_SHP099_60min_R1 4 FNDEHIPESPYLVPVIAPSDDAR 23 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7 O75369-2 FLNB Filamin-B 0 ;;; 136.4 1.9915e-06 694660000.0 1187430.0 1178300.0 932849.0 762104.0 1147680.0 1089230.0 879488.0 978611.0 1070541.0 999971.0 False True 1121560.8908169803 1121692.699335641 992981.9391511717 834534.1350250769 1237995.8865940564 1082431.711540646 968395.2300157234 975216.4268505252 876157.7405424695 991112.0349056657 1.131618678128281 1.131751668662165 1.0018866729286402 0.8420179612736799 1.2490978244572413 1.0921386013072398 0.977079478313363 0.983961845386477 0.88401483352572 1.0 19.918688622733587 -6.852334552597933 4.920695187342081 0.9564400904976871 1.0712004526986323 0.228591843464104 0.10235099747329261 0.3610856927035196 14.777376973595823 0.04629084578586943 0.030981576770780426 1.404964812430021e-07 6.852334552597933 0.11476036220094521 FNDPSGCAPS(ph)PGAYDVK ddPTM_KYSE-520_SHP099_60min_R1 4 FNDPSGCAPSPGAYDVK 17 0 O75330-2;O75330;O75330-3 O75330-2 HMMR Hyaluronan mediated motility receptor 1 FNDPSGCAPS(1)PGAYDVK;FNDPSGCAPS(1)PGAYDVK;FNDPS(0.001)GCAPS(0.999)PGAYDVK;FNDPSGCAPS(1)PGAYDVK 273.74 6.865199999999999e-30 2224940000.0 1864900.0 2374040.0 1549450.0 1286680.0 1244260.0 1796110.0 1365450.0 1800670.0 2022100.0 1886540.0 True False 1761450.2794140182 2259987.554893313 1649330.0262076545 1408965.680345553 1342176.1831290233 1784899.8112568262 1503483.0115077945 1794423.8960495354 1654937.6129928036 1869826.7233059097 0.9420393116960706 1.2086614907811282 0.8820764007969624 0.7535274059269297 0.7178077874274978 0.9545803303640189 0.8040761171974222 0.9596738958126239 0.8850753881979098 1.0 20.83447315119646 -4.876791376943408 7.876813724273531 0.8577379009143165 1.0740376904449334 0.3794183974517592 0.10475173324179378 0.20785520791687026 13.356554714798913 0.02696883891813854 0.056622365852240564 1.3280322544894158e-05 4.876791376943408 0.2162997895306169 FNDS(ph)EGDDT(ph)EETEDYR ddPTM_KYSE-520_SHP099_60min_R1 3 FNDSEGDDTEETEDYR 16 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 2 FNDS(1)EGDDT(1)EETEDYR;FNDS(1)EGDDT(1)EETEDYR;FNDS(1)EGDDT(1)EETEDYR 261.66 1.8242000000000002e-27 1207110000.0 1901750.0 1716760.0 1616850.0 1652360.0 1633580.0 1624850.0 1691690.0 1854160.0 2007180.0 1631150.0 True False 1796256.136455365 1634284.2726907064 1721074.7380514669 1809399.7975998516 1762133.4522012365 1614708.7084424954 1862702.534503367 1847728.3517241967 1642726.708890209 1616699.2800154958 1.1110638562529378 1.0108770956309463 1.064560836592301 1.1191937919230772 1.0899574670339105 0.9987687434530302 1.1521638919054342 1.1429016976530642 1.0160991157702894 1.0 20.624619919392707 -6.7698991326450315 24.999555033581213 1.0896996138836936 1.0667206592725618 0.0 0.05761565608647563 833.9840421891315 2464493.326324325 0.023679447628813893 0.016233821730065757 1.6986381249830043e-07 6.7698991326450315 -0.022978954611131863 FNDS(ph)EGDDTEETEDYR ddPTM_KYSE-520_SHP099_60min_R1 8 FNDSEGDDTEETEDYR 16 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 FNDS(1)EGDDTEETEDYR;FNDS(1)EGDDTEETEDYR;FNDS(1)EGDDTEETEDYR;FNDS(1)EGDDTEETEDYR;FNDS(1)EGDDTEETEDYR;FNDS(1)EGDDTEETEDYR;FNDS(1)EGDDTEETEDYR;FNDS(1)EGDDTEETEDYR 429.35 1.0791999999999997e-117 9158360000.0 3013140.0 2835857.0 2563259.0 2463687.0 2512799.0 2544935.0 2679805.0 2777135.0 3216112.0 2662897.0 True False 2845995.1176543287 2699618.173011858 2728490.7764994106 2697835.0717454944 2710541.9854294397 2529051.1166692926 2950705.8417764446 2767501.766873185 2632147.1323858863 2639305.804282517 1.078311998949284 1.0228516031114994 1.0337910719069319 1.022176008315523 1.0269904991802523 0.9582258761245755 1.1179855843110913 1.0485718488485336 0.9972876686418772 1.0 21.331727088143715 -9.965925737381575 0.003708168786312335 3.907686546630878e-05 2.0319033132406417 0.07101019860003055 0.04052027345861425 149355.1553393738 106.9359792590936 29936.810820174094 28665.326533316467 1.0816188879871425e-10 9.965925737381575 2.0318642363751755 FNEEHIPDSPFVVPVAS(ph)PSGDAR ddPTM_KYSE-520_SHP099_60min_R1 13 FNEEHIPDSPFVVPVASPSGDAR 23 0 Q60FE5;P21333-2;P21333;A0A087WWY3;H0Y5C6 Q60FE5 FLNA Filamin-A 1 FNEEHIPDSPFVVPVAS(0.527)PS(0.473)GDAR;FNEEHIPDSPFVVPVAS(0.907)PS(0.093)GDAR;FNEEHIPDSPFVVPVAS(0.945)PS(0.055)GDAR;FNEEHIPDSPFVVPVAS(0.709)PS(0.291)GDAR;FNEEHIPDSPFVVPVAS(0.943)PS(0.057)GDAR;FNEEHIPDSPFVVPVAS(0.938)PS(0.062)GDAR;FNEEHIPDSPFVVPVAS(0.934)PS(0.066)GDAR;FNEEHIPDSPFVVPVAS(0.965)PS(0.035)GDAR;FNEEHIPDSPFVVPVAS(0.952)PS(0.048)GDAR;FNEEHIPDSPFVVPVAS(0.813)PS(0.187)GDAR;FNEEHIPDSPFVVPVAS(0.979)PS(0.021)GDAR;FNEEHIPDSPFVVPVAS(0.918)PS(0.082)GDAR;FNEEHIPDSPFVVPVAS(0.778)PS(0.222)GDAR 192.5 2.7649999999999998e-15 19910740000.0 5706020.0 5559730.0 4935520.0 4476360.0 4492100.0 5141480.0 4648340.0 5025270.0 6200400.0 5263160.0 True False 5389495.695931131 5292632.225475129 5253671.516311211 4901791.90853329 4845602.713447269 5109390.116184834 5118239.5706266435 5007838.511276837 5074563.659364307 5216532.497076519 1.0331567375361976 1.0145881825602079 1.0071194839206898 0.9396647890682905 0.9288934203252585 0.9794609961786436 0.9811574208528441 0.9599937341679288 0.972784826358932 1.0 22.314659714905478 -5.090249666110972 4.8671854137072375 0.9641001400014736 1.021263958891097 0.5975746173794483 0.019881110139465655 0.15052563429427843 5.925158746776685 0.005699335302657907 0.010333373695469193 8.123633725052549e-06 5.090249666110972 0.05716381888962341 FNEEHIPDSPFVVPVASPS(ph)GDAR ddPTM_KYSE-520_SHP099_60min_R1 1 FNEEHIPDSPFVVPVASPSGDAR 23 0 Q60FE5;P21333-2;P21333;A0A087WWY3;H0Y5C6 Q60FE5 FLNA Filamin-A 1 FNEEHIPDSPFVVPVAS(0.468)PS(0.532)GDAR 124.39 3.1736000000000003e-07 662980000.0 470800.0 410750.0 447960.0 336270.0 384920.0 435270.0 345060.0 403550.0 516800.0 457150.0 True False 444683.78548346827 391016.95345168066 476836.21836134134 368228.999696738 415211.01410478906 432553.31847479136 379942.03226107144 402150.17923927796 422962.1474678211 453100.0066573178 0.981425245971769 0.8629815663353302 1.0523862532669865 0.8126881357016439 0.9163783006050926 0.9546530834680256 0.838539012753588 0.8875527992287727 0.9334851936731703 1.0 18.789469986485376 -4.223030389962776 21.932817576041238 0.9136934648771553 0.9814261021323618 0.06856399599111929 0.0691855619725296 10742.765324100483 6133880.522914407 0.016317851600382963 3.210154930062268 5.9836972238959805e-05 4.223030389962776 0.06773263725520651 FNENNRR ddPTM_KYSE-520_SHP099_60min_R1 6 FNENNRR 7 1 G3V3R6;P17931 G3V3R6 LGALS3 Galectin;Galectin-3 0 ;;;;; 119.27 0.0062823 7472200000.0 1829810.0 1871980.0 1344980.0 1806750.0 1825010.0 1504000.0 2145060.0 1713170.0 2820670.0 1293380.0 False True 1728306.7916641992 1782047.270900736 1431679.562844089 1978462.9767808039 1968627.904113532 1494612.9781195272 2361903.598568175 1707227.4131268829 2308507.43130429 1281921.6594344135 1.3482156097017128 1.3901374220379263 1.1168229761214497 1.5433571640046286 1.5356850316282937 1.1659160036183127 1.8424710911041566 1.3317720319041297 1.8008178692626258 1.0 20.289876668255182 -5.287187838732999 24.84104840737929 1.4806625771195054 1.295566479876374 0.08741811965016621 0.25224949514755457 1534.0038362237412 1479940.032579054 0.06659136896427549 0.0988106492219484 5.161930599141126e-06 5.287187838732999 -0.18509609724313147 FNEYWR ddPTM_KYSE-520_SHP099_60min_R1 1 FNEYWR 6 0 Q99584 Q99584 S100A13 Protein S100-A13 0 128.48 0.056251 1256900000.0 1645000.0 1370400.0 842640.0 776560.0 1439700.0 1439900.0 1164800.0 1167600.0 1064600.0 1167800.0 False True 1553748.5707738006 1304563.9269876631 896957.9226716703 850364.0289187235 1552996.199227539 1430913.0499962163 1282549.351352506 1163549.8681198882 871295.4763820468 1157454.2005346508 1.3423844935342526 1.1270976651906048 0.7749403149233446 0.7346848182208191 1.341734470798222 1.2362588941620754 1.1080778407992915 1.0052664438752061 0.7527688577047613 1.0 20.14252367773947 -7.551734481992543 7.279850174360585 0.8753777098665263 1.083163819511359 0.1553486928337433 0.20176142450924392 0.4088196316703331 75.1886246354344 0.14765277219133888 0.05610137537188656 2.8071493422321752e-08 7.551734481992543 0.2077861096448328 FNFESFPES(ph)PGEK ddPTM_KYSE-520_SHP099_60min_R1 8 FNFESFPESPGEK 13 0 H0YBR0;Q96Q05-3;Q96Q05;Q96Q05-2 H0YBR0 TRAPPC9 Trafficking protein particle complex subunit 9 1 FNFESFPES(1)PGEK;FNFESFPES(1)PGEK;FNFESFPES(1)PGEK;FNFESFPES(1)PGEK;FNFESFPES(1)PGEK;FNFESFPES(1)PGEK;FNFESFPES(1)PGEK;FNFESFPES(1)PGEK 224.55 1.3463e-11 1746689000.0 4049890.0 3480150.0 2800420.0 3109700.0 3392580.0 3637320.0 3520080.0 3712810.0 3715830.0 3653310.0 True False 3825234.5284444373 3312958.370188348 2980939.5540304263 3405244.9530346063 3659556.744860289 3614618.136684653 3875924.039070165 3699931.128686369 3041128.940451529 3620944.5156321726 1.056418984585462 0.9149431469843845 0.8232491663877348 0.940430028224305 1.010663579367599 0.9982528373687563 1.0704179592747711 1.0218138147969953 0.8398717316220973 1.0 21.787934639638515 -5.656918322442818 5.5110120765085675 0.9954576450700672 0.9226345641200431 0.10947849192871406 0.07660982522199765 0.4072509892582693 18.419588536096274 0.02354712351001313 0.03046290278633686 2.2033408053496495e-06 5.656918322442818 -0.0728230809500241 FNGGHS(ph)PTHS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 2 FNGGHSPTHSPEK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 2 FNGGHS(0.996)PT(0.006)HS(0.998)PEK;FNGGHS(0.984)PT(0.018)HS(0.998)PEK 114.96 8.821399999999999e-05 3840400000.0 4749000.0 4743400.0 4064800.0 4345100.0 4163900.0 4177200.0 3991900.0 4342800.0 5115000.0 3715100.0 True False 4485563.503103209 4515519.9440114405 4326823.5119099505 4758056.9975980455 4491575.240649824 4151128.545346333 4395440.209189618 4327735.840417138 4186244.9386569313 3682187.1043040673 1.2181791354002853 1.226314637497182 1.1750688895880317 1.2921822989484717 1.2198117894116982 1.127354050122582 1.1937036561916794 1.1753166576892566 1.1368908803584903 1.0 21.812131506059075 -8.941089514295067 0.3314242258502317 0.9521645212491934 1.2327190182049312 0.7576064881965513 0.03648357382137325 2.403528695035024 0.39697469257036816 0.19463084330238622 0.03891445981325279 1.145276859199537e-09 8.941089514295067 0.28055449695573786 FNGGHS(ph)PTHSPEK ddPTM_KYSE-520_SHP099_60min_R1 4 FNGGHSPTHSPEK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 FNGGHS(0.786)PT(0.214)HSPEK;FNGGHS(0.98)PT(0.02)HSPEK;FNGGHS(0.857)PT(0.143)HSPEK;FNGGHS(0.684)PT(0.316)HSPEK 166.9 5.354399999999999e-07 22410500000.0 9733400.0 10200000.0 9404200.0 12520100.0 9453200.0 8607200.0 8653600.0 8919300.0 11082500.0 8096300.0 True False 9193468.898948146 9709976.689487852 10010409.779252008 13710006.539694691 10197113.058649557 8553479.272121264 9528390.338997291 8888361.030080259 9070197.367090022 8024573.080826088 1.1456645489234831 1.2100303145956595 1.247469451449184 1.7085029199189894 1.2707358953480696 1.0659108199237346 1.1874015281591022 1.107642854087541 1.1303027931495009 1.0 22.935993210087645 -6.139262842157757 5.370900298062698 1.11171014548568 1.3330696357040885 0.351830957335454 0.14842248622411025 0.2934419877711932 11.700252627872427 0.05272488815922164 0.05287489425840898 7.256666391314375e-07 6.139262842157757 0.22135949021840862 FNGGHSPT(ph)HS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 1 FNGGHSPTHSPEK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 2 FNGGHS(0.059)PT(0.941)HS(1)PEK 100.02 0.0027153000000000004 1500300000.0 2172800.0 2077300.0 1720100.0 1912500.0 2002600.0 2004600.0 1880400.0 1928100.0 2199400.0 1804600.0 True False 2052270.4526305837 1977503.389909131 1830980.3982573072 2094263.424985908 2160193.226764651 1992088.5478313854 2070489.1829354838 1921411.871121921 1800044.4023620847 1788612.647957554 1.1474091134120654 1.1056074059228387 1.0236874934034117 1.1708870712601644 1.207747932025087 1.1137618590062994 1.1575950697317325 1.0742470558485722 1.0063914086806804 1.0 20.770409552366242 -7.594597990596973 2.8870619994828335 1.0008124972606935 1.1307009128358236 0.5571251954474892 0.045944850006054645 0.22058745232863036 3.505431199198505 0.041212077241960084 0.013266675454001058 2.5433258734754362e-08 7.594597990596973 0.1298884155751301 FNGGHSPT(ph)HSPEK ddPTM_KYSE-520_SHP099_60min_R1 7 FNGGHSPTHSPEK 13 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 FNGGHS(0.057)PT(0.669)HS(0.274)PEK;FNGGHS(0.318)PT(0.682)HSPEK;FNGGHS(0.049)PT(0.95)HS(0.001)PEK;FNGGHS(0.069)PT(0.931)HSPEK;FNGGHS(0.343)PT(0.657)HSPEK;FNGGHS(0.065)PT(0.934)HS(0.001)PEK;FNGGHS(0.373)PT(0.627)HSPEK 178.0 3.7248000000000006e-07 25229550000.0 14779330.0 14568710.0 15108690.0 18612610.0 15043260.0 13529280.0 13842300.0 13659130.0 17514210.0 12699350.0 True False 13959491.103036063 13868807.30352048 16082620.332158722 20381546.858314775 16227078.977558991 13444838.745088391 15241614.771829333 13611749.666094914 14334070.96130491 12586843.638944788 1.1090541444277726 1.1018494947064557 1.2777325907503687 1.6192738579235622 1.289209546335429 1.0681660256340113 1.2109163511549832 1.0814267704080296 1.1388137782973684 1.0 23.585413212769037 -6.252152461764014 23.183176429845528 1.1118944932743755 1.2883452984089967 0.28192598720104733 0.14228278679335515 384.53572060244664 959925.873938445 0.05225864166191731 0.05147109634602917 5.59561129615317e-07 6.252152461764014 0.1764508051346212 FNGS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 6 FNGSPSK 7 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 FNGS(0.996)PS(0.004)K;FNGS(0.958)PS(0.042)K;FNGS(0.999)PS(0.001)K;FNGS(0.983)PS(0.017)K;FNGS(0.978)PS(0.022)K;FNGS(0.998)PS(0.002)K 85.62200000000001 0.0084978 15062400000.0 31540400.0 27706200.0 26145100.0 27318800.0 28017100.0 28353700.0 30125800.0 24532200.0 30341600.0 29486000.0 True False 29790791.137771383 26375152.56414598 27830454.979639042 29915170.538303252 30221886.374507096 28176734.041029036 33171209.86347469 24447103.5240585 24832330.28949232 29224776.979760904 1.0193676125707465 0.9024928601649079 0.9522897300093179 1.0236235697887608 1.0341186314419686 0.9641385479363052 1.135037228391745 0.8365197633839568 0.8497012759648946 1.0 24.800688679510106 -7.297386912620759 24.99874020364524 0.8823328787258681 0.9988411333599758 0.32428550647498167 0.07105836774829322 684.0630829723993 475709.7913400906 0.0384720596256842 0.01848237913833264 5.0421189541641785e-08 7.297386912620759 0.11650825463410774 FNGS(ph)TEALDKLDADAVS(ph)PTVSQLSAVFEK ddPTM_KYSE-520_SHP099_60min_R1 1 FNGSTEALDKLDADAVSPTVSQLSAVFEK 29 1 Q96SB3 Q96SB3 PPP1R9B Neurabin-2 2 FNGS(0.779)T(0.221)EALDKLDADAVS(0.654)PT(0.154)VS(0.154)QLS(0.037)AVFEK 48.348 0.066324 30594000.0 67068.0 67965.0 56820.0 65355.0 69781.0 71335.0 72586.0 75391.0 107720.0 76750.0 True False 63347.604343256586 64699.85938245523 60482.708115214366 71566.31955030271 75272.36770042151 70889.77180462523 79923.70125109298 75129.48621739163 88160.76340021989 76070.0547105965 0.8327535004971189 0.8505299441232371 0.7950922126363237 0.9407949004713096 0.9895137841926139 0.9319011544598027 1.050659179294105 0.9876354960334498 1.1589417640834057 1.0 16.21504102220453 -5.812363836221861 0.7058184360061102 1.055587933619636 0.8078617910454895 0.7154157048868384 0.055226686543744685 0.4127918762828219 0.44741437098478337 0.033909209523043764 0.057505568631982265 1.5404094128948386e-06 5.812363836221861 -0.2477261425741466 FNGS(ph)TEALDKLDADAVSPTVSQLSAVFEK ddPTM_KYSE-520_SHP099_60min_R1 4 FNGSTEALDKLDADAVSPTVSQLSAVFEK 29 1 Q96SB3 Q96SB3 PPP1R9B Neurabin-2 1 FNGS(0.723)T(0.276)EALDKLDADAVSPTVSQLSAVFEK;FNGS(0.555)T(0.444)EALDKLDADAVS(0.001)PTVSQLSAVFEK;FNGS(0.787)T(0.213)EALDKLDADAVSPTVSQLSAVFEK;FNGS(0.969)T(0.031)EALDKLDADAVSPTVSQLSAVFEK 241.41 3.5235e-31 1511615000.0 621127.0 637083.0 497925.0 414509.0 450874.0 598732.0 430467.0 496351.0 730162.0 510218.0 True False 586671.8471240223 606476.5763989215 530022.0422081683 453903.8107333244 486355.21867786127 594995.0914996417 473982.8053130657 494629.27423019405 597582.9866861437 505697.86546359776 1.160123241940505 1.1992864075922787 1.0481002163658955 0.8975790521029958 0.9617505864534268 1.1765821691855092 0.9372845678882641 0.9781122445054091 1.1816996422128663 1.0 18.947916163339855 -4.8346820223049845 5.120998766034793 1.0159336397705492 1.179579562456661 0.33459494362693765 0.08899001357944683 0.21004668521279013 9.900397359950727 0.023706940707718192 0.052544439590038565 1.4632481297559216e-05 4.8346820223049845 0.16364592268611178 FNGTHIPGSPFK ddPTM_KYSE-520_SHP099_60min_R1 1 FNGTHIPGSPFK 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 77.91199999999999 0.02231 593670000.0 1342600.0 1324500.0 851160.0 1118200.0 1436900.0 1433900.0 952490.0 1317600.0 1106500.0 1152500.0 False True 1268123.3015932546 1260869.0318849678 906027.1355041517 1224473.3918009123 1549975.8551573576 1424950.4982218025 1048776.9846065848 1313029.5531301508 905587.4925950913 1142289.746631432 1.1101590514428592 1.1038084125356298 0.7931675287955533 1.0719464088790402 1.3569025369685546 1.2474510100645881 0.9181356899152664 1.149471539075111 0.7927826501687804 1.0 20.12349721215105 -7.753158761656058 24.990994550717108 0.8963913057827314 1.091484611167799 0.20655782382855903 0.15476741945118264 276.3829387444341 834144.6372797148 0.11558264082085024 0.042056331705985696 1.7653923419637826e-08 7.753158761656058 0.19509330538506753 FNHQNIVRCIGVS(ph)LQSLPR ddPTM_KYSE-520_SHP099_60min_R1 1 FNHQNIVRCIGVSLQSLPR 19 1 A0A0K2YUJ3;A0A087WZL3;Q9UM73 A0A0K2YUJ3 ALK Tyrosine-protein kinase receptor;ALK tyrosine kinase receptor 1 FNHQNIVRCIGVS(0.997)LQS(0.003)LPR 50.751999999999995 0.048514 473360000.0 154920.0 130390.0 161790.0 91857.0 132990.0 119550.0 108820.0 127640.0 173710.0 122780.0 True False 146326.2787746366 124125.86868061978 172219.2422731529 100587.06166218591 143455.55639040802 118803.84410517907 119820.58758085477 127197.24663140003 142168.64287274596 121692.26472139455 1.2024287583901887 1.0199980168402387 1.4152028698573087 0.8265690665916404 1.1788387431102456 0.9762645503982665 0.9846195882308145 1.0452369090394424 1.168263596689819 1.0 16.892877941561963 -5.265354463481406 24.99979014867705 1.0301807238523473 1.1932886878606852 0.30007535659714035 0.1296546458276209 448.6378715917896 2864783.981100412 0.03447008194108736 0.05332574214185491 5.42807121066891e-06 5.265354463481406 0.16310796400833794 FNHWELK ddPTM_KYSE-520_SHP099_60min_R1 4 FNHWELK 7 0 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 0 ;;; 132.69 0.0032735 4349400000.0 13453270.0 12413360.0 8203250.0 7932030.0 13600650.0 12633660.0 9197220.0 9574290.0 9771100.0 9454100.0 False True 12706990.294671135 11817003.552766765 8732044.62066408 8685887.746348225 14670943.777887067 12554808.641721776 10126964.753817217 9541079.022646096 7996914.549386269 9370344.029178498 1.3560857803195474 1.2611066910638036 0.9318808993003027 0.9269550530163106 1.5656782432110206 1.3398450049034605 1.080746312225321 1.0182207817488815 0.8534280624579546 1.0 23.159670586267158 -7.1450504037269775 2.708380446528247 0.9430945564583668 1.2181771763430191 0.3026862384788619 0.18500337221861796 0.41144919458840346 5.79579926204121 0.11634695295780913 0.0583773355916957 7.16060300240608e-08 7.1450504037269775 0.2750826198846523 FNIDEVLQEWEAEHGKEETNGPSNQKPVKS(ph)PDNSIK ddPTM_KYSE-520_SHP099_60min_R1 1 FNIDEVLQEWEAEHGKEETNGPSNQKPVKSPDNSIK 36 3 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 FNIDEVLQEWEAEHGKEET(0.015)NGPS(0.226)NQKPVKS(0.72)PDNS(0.039)IK 104.02 0.00025822 2079200000.0 901230.0 832240.0 840260.0 619050.0 779120.0 748880.0 597200.0 667120.0 942680.0 619800.0 True False 851236.9753425367 792257.9411822914 894424.5040635346 677884.325875831 840432.3114136009 744205.9621370692 657570.8041103336 664805.9164269785 771513.0750289569 614309.0541971029 1.385681961753106 1.2896732284334735 1.4559845699043787 1.103490696164035 1.3680936422336136 1.2114520485291245 1.070423428757327 1.0822010710811916 1.2559037991672097 1.0 19.228605121533203 -4.967412487240559 0.18771232377609065 0.9693913478172 1.6570068831791915 0.5182400232694138 0.1016719118329843 9.836795392522449 0.44975588661912597 0.2951023013499543 1.6547270693135174 1.0779224391928183e-05 4.967412487240559 0.6876155353619915 FNLTYVSHDGDDK ddPTM_KYSE-520_SHP099_60min_R1 3 FNLTYVSHDGDDK 13 0 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 0 ;; 193.06 3.4718e-08 1604290000.0 4061790.0 3766820.0 2647940.0 2754900.0 3455400.0 3581490.0 2945670.0 3266150.0 3472410.0 3473710.0 False True 3836474.4117223797 3585856.313087907 2818630.4492538013 3016724.867709114 3727320.321463383 3559136.592423744 3243447.070568798 3254820.487975141 2841907.876332691 3442935.631905483 1.114303263810684 1.0415112846891432 0.8186706783402273 0.8762071645352011 1.0825994790383309 1.0337505468999866 0.9420585852700712 0.9453619921943675 0.8254316026117063 1.0 21.715207778289273 -7.133509967478382 2.8071924504802697 0.9122554368688689 0.9868371581982425 0.09944176013910566 0.0937160697123065 0.7345043847255782 11.074935945879279 0.05655421791524475 0.02894645420935274 7.353431184459831e-08 7.133509967478382 0.07458172132937357 FNLTYVSHDGDDKK ddPTM_KYSE-520_SHP099_60min_R1 1 FNLTYVSHDGDDKK 14 1 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 0 160.81 8.401799999999999e-08 561460000.0 1286800.0 1096100.0 774530.0 793950.0 1080800.0 1057200.0 830100.0 954210.0 882180.0 917720.0 False True 1215418.638827796 1043441.7107203589 824457.4430918158 869406.7692902279 1165852.8110892014 1050601.6226515726 914014.6089952914 950900.0682242875 721998.3499480692 909589.714775357 1.336227333142141 1.147156452816817 0.9064058549688345 0.9558229992793474 1.2817348219214793 1.155028036911171 1.0048647144399903 1.045416469401408 0.793762658284216 1.0 19.79485641542326 -7.293041276506599 1.8768209413673411 0.9115067272210307 1.1159267143695406 0.2785833041873783 0.1354203421600674 0.5397558978999151 3.497086091592789 0.10867603618698365 0.04231932616321898 5.0928246519226336e-08 7.293041276506599 0.20441998714850995 FNNDSHS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 FNNDSHSPK 9 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 FNNDS(0.479)HS(0.521)PK 108.72 0.0010888 653030000.0 513130.0 479710.0 429610.0 424230.0 491040.0 476890.0 447640.0 504670.0 595210.0 469870.0 True False 484665.65600070526 456664.0115406102 457303.348000304 464548.6916505997 529682.0543645832 473913.5526166367 492891.8197453952 502919.41756086383 487134.86802306754 465707.3173533285 1.0407086982337304 0.9805815681314339 0.981954397021749 0.9975121161734941 1.137371122650232 1.0176210142240092 1.058372504315714 1.0799044782440101 1.0460107665722636 1.0 18.82906402489315 -5.612741228442211 24.99997916465738 1.0594835694241578 0.9974366458768692 0.3444167201625713 0.037885806451873845 19.42957292130261 5399.27648736096 0.010624605861522387 0.013716307564387707 2.43926380500915e-06 5.612741228442211 -0.06204692354728858 FNPFVTSDR ddPTM_KYSE-520_SHP099_60min_R1 1 FNPFVTSDR 9 0 P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;E5RHH1;J3KSS0 P61254 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 0 132.38 0.0040551 721470000.0 811520.0 908050.0 565140.0 468980.0 845910.0 968010.0 579360.0 650790.0 686240.0 714420.0 False True 766503.367874987 864425.9149891632 601569.828655971 513551.71819602186 912478.3044304841 961968.2905249223 637927.3628087126 648532.5613855275 561636.1147026266 708090.7946103502 1.0824930555646897 1.2207840033633561 0.849565950065774 0.7252625258016809 1.2886459072421705 1.3585380545079342 0.900911814790295 0.9158889881380303 0.7931696316030842 1.0 19.433574835501773 -6.942573446269595 24.999733001965875 0.8943896019980653 1.0799825714197304 0.19280026893933822 0.18486326970524639 150.61758485157284 65568.22221893758 0.08480411374164416 0.057174913074740145 1.1413702639967158e-07 6.942573446269595 0.18559296942166514 FNS(ph)LPRPDPEPVPPVGSK ddPTM_KYSE-520_SHP099_60min_R1 2 FNSLPRPDPEPVPPVGSK 18 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 FNS(1)LPRPDPEPVPPVGSK;FNS(1)LPRPDPEPVPPVGSK 134.34 6.2802e-06 3888800000.0 4065500.0 3542300.0 2852800.0 2302570.0 2942300.0 3471600.0 2600800.0 3077300.0 4006600.0 3391000.0 True False 3839978.6106266784 3372122.590899296 3036696.0526413913 2521405.560507085 3173842.270603036 3449932.456675364 2863714.2453619535 3066625.5645472175 3279102.4381667413 3360958.3781580813 1.1425248927751126 1.0033217348997143 0.9035208743958333 0.7502043395993796 0.9443265620987573 1.0264728296236871 0.8520528739577446 0.9124259272225298 0.9756450598962193 1.0 21.680441245859782 -4.410623620216851 2.655178587530347 0.9141491507772085 1.1543779231290516 0.4520055995504836 0.0747705907143663 0.31932607273230523 3.5706216896484446 0.020299306121773497 0.14404118908241464 3.884869009456147e-05 4.410623620216851 0.24022877235184315 FNSLPQYS(ph)PVTFDR ddPTM_KYSE-520_SHP099_60min_R1 1 FNSLPQYSPVTFDR 14 0 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 FNS(0.001)LPQY(0.023)S(0.969)PVT(0.006)FDR 66.67399999999999 0.032954000000000004 35188000.0 149780.0 143390.0 142920.0 134400.0 128720.0 132570.0 110920.0 152690.0 185520.0 145360.0 True False 141471.4048209726 136501.32916722217 152132.8518800851 147173.33559116637 138849.53168338464 131742.58145565522 122132.8760748798 152160.35402811406 151834.24457861859 144072.2234883687 0.9819478133645513 0.9474507011980852 1.0559485249588527 1.021524704954998 0.9637494884265064 0.9144204084994295 0.8477197971803349 1.05613941635598 1.053875902670972 1.0 17.13643269129374 FNVWDTAGQEK ddPTM_KYSE-520_SHP099_60min_R1 1 FNVWDTAGQEK 11 0 F5H018;B5MDF5;J3KQE5;P62826;H0YFC6 F5H018 RAN GTP-binding nuclear protein Ran 0 121.02 0.0016759000000000001 996280000.0 2001700.0 1883900.0 1513100.0 1097200.0 2043300.0 1997500.0 2048300.0 2127300.0 1985500.0 1719400.0 False True 1890661.710709979 1793394.6162084504 1610636.847045597 1201477.5581147925 2204096.08521333 1985032.8615649957 2255362.153481579 2119920.892815554 1624983.2503818846 1704167.4536729583 1.1094342323197601 1.0523582130049383 0.9451165397943866 0.7050231803953724 1.29335651872877 1.164810921184238 1.3234392832820752 1.2439627856092021 0.953534963292246 1.0 20.70063567291255 -5.788118474611607 24.999989091202824 1.18347631129497 0.9595190552181362 0.3214430250098431 0.14774180570172954 253.99276779962125 238005.85276730612 0.04676432452186509 0.05304011534580749 1.628851624764468e-06 5.788118474611607 -0.2239572560768338 FNYSGS(ph)GGR ddPTM_KYSE-520_SHP099_60min_R1 2 FNYSGSGGR 9 0 Q12906;Q12906-7 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 FNYSGS(1)GGR;FNYS(0.009)GS(0.991)GGR 110.74 0.0009361 1223240000.0 2294900.0 1968150.0 1888630.0 1839530.0 1817130.0 1952230.0 1862700.0 1863730.0 2288200.0 1993720.0 True False 2167597.322230271 1873597.1197466222 2010374.1117148441 2014358.3781251372 1960127.792944596 1940045.4084270508 2050999.894200135 1857265.155627853 1872720.560827916 1976057.1918906893 1.096930458857983 0.9481492374995314 1.0173663596200475 1.019382630417595 0.9919387966039322 0.9817759406906728 1.0379253710960363 0.9398843126857193 0.9477056476468169 1.0 20.914193271946683 -7.268851754982208 24.94856468327687 0.95784623424102 1.0091930520313177 0.250473241921624 0.03958811351141051 777.2166436781239 2615938.8852401045 0.019879811007230207 0.009831177845193648 5.384535505294288e-08 7.268851754982208 0.051346817790297705 FPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSER ddPTM_KYSE-520_SHP099_60min_R1 2 FPDEDEILEKDEALEDEDNKKDDGISFSNQTGPAWAGSER 40 3 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 0 ; 140.38 3.4881e-07 3704500000.0 850780.0 705740.0 416190.0 465630.0 646120.0 668420.0 549680.0 498920.0 561930.0 637810.0 False True 803585.5374121176 671835.191062663 443018.2733275443 509883.3352032353 696965.968080085 664248.1428421898 605247.0187598269 497189.3629688035 459897.6771025394 632159.4996086706 1.2711752934339606 1.0627621533466682 0.7008014173666431 0.8065738718137929 1.1025160082408505 1.0507603591393995 0.957427704771496 0.7864935404381039 0.7275025960809457 1.0 19.269929083887725 -7.181637075947913 5.2112169798195 0.8182637153250466 0.9854017247028234 0.15912756780451043 0.1616176114746805 0.41988292813577666 19.869264770886826 0.08462911882347775 0.04754809524527642 6.582076477098568e-08 7.181637075947913 0.1671380093777768 FPDENFK ddPTM_KYSE-520_SHP099_60min_R1 3 FPDENFK 7 0 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 ;; 132.09 0.014788999999999998 2048320000.0 1899260.0 2058440.0 1355700.0 1152390.0 1972620.0 2149750.0 1714560.0 1698300.0 1645330.0 1916270.0 False True 1793904.261719056 1959549.4526185708 1443090.591196695 1261912.7991213133 2127853.9713275153 2136332.6128407274 1887884.4572930573 1692408.993686199 1346579.5473940184 1899293.338635499 0.9445114270804755 1.0317255437890187 0.7598039554192553 0.6644117438056745 1.1203398274730012 1.1248039306953626 0.9939930914775713 0.8910729897584272 0.7089897700380688 1.0 20.8570313107844 -3.137912990503336 22.865803611157837 0.925141828217827 0.9200398922379556 0.0 0.15596342946585542 0.0 0.0 0.03818764423627669 0.0 0.0007279256274770006 3.137912990503336 -0.005101935979871408 FPEAEALS(ph)PEQAAHYLR ddPTM_KYSE-520_SHP099_60min_R1 8 FPEAEALSPEQAAHYLR 17 0 Q2NKX8 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR;FPEAEALS(1)PEQAAHYLR 313.24 1.8216999999999998e-47 4629220000.0 1446162.0 1265839.0 1107816.0 1127171.0 1168132.0 1370242.0 1221421.0 1264836.0 1422893.0 1333623.0 True False 1365940.5110075257 1205026.1943769243 1179227.591928271 1234296.9929436806 1260057.3426380928 1361689.811412539 1344894.1546002151 1260448.5791309422 1164531.4994135643 1321808.1377629947 1.0333878813299031 0.9116498529176026 0.8921321924405576 0.9337943667320611 0.9532830874914964 1.0301720594011772 1.017465482453672 0.9535790733321582 0.8810140187095514 1.0 20.334081352232 -6.008526659579608 23.271641996591995 0.9778439750009699 0.9377345040854143 0.08485725399840005 0.05166128214039332 392.92859881521184 1072420.7827192408 0.01728166181553818 0.018652012694453574 9.80558119982143e-07 6.008526659579608 -0.04010947091555561 FPEFCSSPS(ph)PPVEVK ddPTM_KYSE-520_SHP099_60min_R1 4 FPEFCSSPSPPVEVK 15 0 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 FPEFCS(0.063)S(0.04)PS(0.897)PPVEVK;FPEFCS(0.106)S(0.042)PS(0.852)PPVEVK;FPEFCSS(0.001)PS(0.998)PPVEVK;FPEFCS(0.399)S(0.155)PS(0.445)PPVEVK 247.46 5.370399999999999e-19 1964804000.0 2382460.0 2636680.0 1969960.0 1681780.0 1692120.0 2453820.0 1933090.0 2300670.0 2524390.0 2312090.0 True False 2250300.1944837347 2510009.9350626315 2096946.773647443 1841615.8655544054 1825280.2171542025 2438504.7991816867 2128505.602340332 2292689.5127504156 2066024.4106932906 2291606.6813787995 0.9819748793583497 1.0953057326366427 0.9150552713460257 0.8036352313505882 0.7965067618217885 1.0641026747724887 0.9288267570679565 1.000472520603302 0.901561523398168 1.0 21.127928018516055 -9.26016337251464 14.486451999293164 0.9999986760251826 0.9431243825489624 0.03272963907940363 0.09287992189642805 0.0 0.0 0.09645851511656557 0.02339462625387281 5.493341869351324e-10 9.26016337251464 -0.056874293476220195 FPEHELTFDPQR ddPTM_KYSE-520_SHP099_60min_R1 3 FPEHELTFDPQR 12 0 A0A494C039;Q9Y4L1;E9PJ21;A0A087WWI4;K7EQK2;A0A087X054;Q9Y4L1-2;Q9BST8;J3QQH7;J3QLE9;J3QL06;J3KTF1 A0A494C039 HYOU1 Hypoxia up-regulated protein 1 0 ;; 142.91 5.2845e-05 921330000.0 875060.0 808010.0 658310.0 568720.0 794230.0 840270.0 617970.0 601760.0 741530.0 758490.0 False True 826518.6774111365 769191.9867522642 700745.7159332423 622770.9778080976 856731.3824494607 835025.5632476693 680440.4384059993 599672.63501184 606886.844450102 751770.3686962908 1.0994297086282785 1.0231741217550059 0.9321273424868626 0.8284058586774283 1.139618450159444 1.1107455122177248 0.905117395869179 0.7976805950090632 0.8072768889555414 1.0 19.519932526586313 -6.961324252719497 8.09549219660609 0.8516634487376407 1.0144844420009533 0.3325575603595683 0.10026030145930595 0.27255312747105936 49.93687308269286 0.044708510856469916 0.029937389161234677 1.0931399019726521e-07 6.961324252719497 0.16282099326331267 FPELEAEDIFDS(ph)DKEVPIESTFVR ddPTM_KYSE-520_SHP099_60min_R1 1 FPELEAEDIFDSDKEVPIESTFVR 24 1 Q96JQ2 Q96JQ2 CLMN Calmin 1 FPELEAEDIFDS(1)DKEVPIESTFVR 92.258 0.0024107 19918000.0 19061.0 16723.0 12577.0 15814.0 15298.0 20953.0 13748.0 16947.0 20569.0 12806.0 True False 18003.648332838537 15919.601978265255 13387.733543911507 17316.95780534753 16501.86556628666 20822.224554879285 15137.78200755003 16888.21481245954 16834.188102294127 12692.54880291724 1.4184423170152083 1.2542478445784122 1.0547710906444958 1.3643404547215467 1.3001222861159212 1.6405077402651806 1.1926510776204997 1.3305613454547423 1.3263047764232334 1.0 13.631694186797708 -10.373763489705055 5.496904598769544 0.9998854750017708 1.3171484893505465 0.3092919463706294 0.1434922841692231 0.0002054676402031814 2.340796130067422e-05 0.1417454020884093 0.03436597280303898 4.2289885597390525e-11 10.373763489705055 0.3172630143487757 FPGQLNADLR ddPTM_KYSE-520_SHP099_60min_R1 2 FPGQLNADLR 10 0 P04350;Q9BUF5;K7ESM5;M0R2D3;A0A0B4J269;Q13509;Q13509-2;G3V2A3;Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A075B736;Q5SQY0;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;Q3ZCM7 P04350;A0A0B4J269;Q5JP53;P68371 TUBB4A;TUBB6;TUBB3;TUBB;TUBB2B;TUBB2A;TUBB8;TUBB1;TUBB4B Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-8 chain 0 ; 89.88600000000001 0.027869 320420000.0 226426.0 269000.0 197778.0 135449.0 230930.0 294920.0 193209.0 208974.0 209230.0 226670.0 False True 213865.69841095954 256076.83622276835 210527.0863359886 148322.03223577302 249102.87718803625 293079.2948849804 212740.4512581271 208249.11796889844 171239.10625907898 224661.88014659157 0.9519447548084813 1.1398321604701187 0.9370841470685635 0.6602011526788305 1.1087901384315708 1.30453504036264 0.9469361296153769 0.9269446059697185 0.7622081064546673 1.0 17.77739582819844 -7.220046546189966 3.6499072395204526 0.8795014968426248 1.013611921093095 0.08962791928827929 0.16628215224587914 0.5997382074825982 16.75684453121247 0.09707501095116884 0.049481643032320805 6.0249500926945e-08 7.220046546189966 0.13411042425047015 FPGYDS(ph)ESKEFNAEVHR ddPTM_KYSE-520_SHP099_60min_R1 2 FPGYDSESKEFNAEVHR 17 1 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 1 FPGYDS(1)ESKEFNAEVHR;FPGYDS(1)ESKEFNAEVHR 244.95 1.276e-23 1062450000.0 681320.0 630750.0 572330.0 705080.0 677870.0 687480.0 694090.0 676380.0 743260.0 660790.0 True False 643525.8214222528 600447.8232249485 609223.307560377 772090.5912099682 731214.5124472952 683189.1823122419 764255.390865609 674033.7956482791 608302.7200598542 654935.9146868405 0.9825783057414962 0.9168039341865293 0.9302029311549954 1.1788796031733053 1.1164672696212232 1.043138980458738 1.166916294750823 1.0291599231820572 0.9287973165293828 1.0 19.320994220649162 -5.229363302342729 24.841045196073043 1.0727400339952888 0.9405559007832597 0.3712193886657954 0.07298639845794197 638.1379775267143 494199.63521952316 0.02038151762548645 0.035297553275877046 5.897075630226025e-06 5.229363302342729 -0.13218413321202915 FPLDYYSIPFPTPT(ph)TPLTGR ddPTM_KYSE-520_SHP099_60min_R1 1 FPLDYYSIPFPTPTTPLTGR 20 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5;H0Y5H6;H7C2T8 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 FPLDYYSIPFPTPT(0.835)T(0.163)PLT(0.001)GR 152.4 9.0146e-09 7609500.0 21267.0 24897.0 22976.0 24029.0 24444.0 34680.0 26478.0 34710.0 37611.0 31780.0 True False 20087.277115286568 23700.9107488411 24457.069722899792 26312.708935417715 26367.603732665113 34463.54925610719 29154.654640377485 34589.59911137491 30781.79049615364 31498.453924465866 0.6377226375445727 0.7524467964578997 0.7764530215212626 0.8353650943794351 0.8371078718941358 1.0941346308219349 0.9255900213480676 1.0981364099432211 0.9772476633287842 1.0 14.942993396408145 -5.586735580199179 0.7779868034197377 1.031489384133683 0.6673518761408782 0.8060919409655573 0.06336966590440134 0.3063180473396182 0.38137941430796435 0.03218099789186108 0.0701088251225152 2.5897892260545462e-06 5.586735580199179 -0.36413750799280475 FPLDYYSIPFPTPTT(ph)PLTGR ddPTM_KYSE-520_SHP099_60min_R1 1 FPLDYYSIPFPTPTTPLTGR 20 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5;H0Y5H6;H7C2T8 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 FPLDYYSIPFPT(0.003)PT(0.164)T(0.833)PLT(0.001)GR 218.63 3.5432e-18 98880000.0 156600.0 238460.0 215550.0 180910.0 205610.0 347520.0 265520.0 399970.0 402100.0 321180.0 True False 147913.0858256396 227004.02366424285 229444.69789219374 198103.63200742492 221790.33723912915 345350.99877400126 292361.35282547877 398582.5974236998 329088.7761161198 318334.5950742588 0.4646465954827671 0.713098818591454 0.7207658276621507 0.6223126077805422 0.6967208109674398 1.0848679474922927 0.9184089864856781 1.252086966327745 1.033782633770459 1.0 18.280184425095776 -6.218571454398802 4.309562675580076 1.0668400746336557 0.6447730094206402 0.8012129550020151 0.10332548387630355 0.09468565152646277 3.9515716702279247 0.03517639365986913 0.03422937138234088 6.045448774937322e-07 6.218571454398802 -0.4220670652130155 FPPEDFRHS(ph)PEDFR ddPTM_KYSE-520_SHP099_60min_R1 19 FPPEDFRHSPEDFR 14 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR;FPPEDFRHS(1)PEDFR 193.8 4.7616000000000004e-11 19892350000.0 9927360.0 8921090.0 8857510.0 8207070.0 8584110.0 8898310.0 7855060.0 8415270.0 10668140.0 8360020.0 True False 9376669.551098464 8492507.445570914 9428479.267117087 8987067.465254422 9259630.62009524 8842772.346629493 8649126.122797934 8386079.392508776 8731074.697924452 8285956.726797136 1.1316339030318512 1.0249278056335709 1.1378866168374961 1.0846143374355148 1.1175089281059363 1.0671999188737726 1.0438295067154157 1.0120834164373367 1.0537195626049778 1.0 22.98223685522201 -6.693922996534248 2.2888185821888984 1.0253252475646495 1.0964333471364198 0.5241110217791045 0.032394100538816806 0.2479017801606901 2.653826640996905 0.014259040893890235 0.0098230437557716 2.0233779060067297e-07 6.693922996534248 0.07110809957177033 FPPEITVT(ph)PPT(ph)PTLLSPK ddPTM_KYSE-520_SHP099_60min_R1 1 FPPEITVTPPTPTLLSPK 18 0 B5MEB3;A0A087WWW8;Q9Y6J0-2;Q9Y6J0 B5MEB3 CABIN1 Calcineurin-binding protein cabin-1 2 FPPEIT(0.011)VT(0.939)PPT(0.88)PT(0.17)LLSPK 124.43 0.00013052 0.0 71428.0 78677.0 73515.0 71114.0 71607.0 71799.0 61027.0 74078.0 82670.0 67771.0 True False 67465.74645181205 74897.2388234153 78253.89452815882 77872.6531787962 77242.06351190273 71350.87580851332 67196.20472612411 73821.04070793508 67659.21194110825 67170.60166504009 1.0043939577650915 1.115030042412091 1.1650021376671276 1.1593264203159006 1.1499385385452707 1.0622336861640607 1.0003811646829024 1.0990081803354803 1.0072741685195068 1.0 16.03554233112424 -6.4389583831643815 4.904888717753475 1.034332055790597 1.1228701146287297 0.42538120939669466 0.05023556219127934 0.23527442011023314 9.776486262509128 0.018867788502226795 0.016327423853316928 3.639499104314781e-07 6.4389583831643815 0.0885380588381326 FPPEITVTPPT(ph)PT(ph)LLSPK ddPTM_KYSE-520_SHP099_60min_R1 1 FPPEITVTPPTPTLLSPK 18 0 B5MEB3;A0A087WWW8;Q9Y6J0-2;Q9Y6J0 B5MEB3 CABIN1 Calcineurin-binding protein cabin-1 2 FPPEITVT(0.164)PPT(0.917)PT(0.917)LLS(0.001)PK 123.4 0.00011721 47229000.0 197950.0 193330.0 184310.0 209100.0 215770.0 219340.0 191950.0 244890.0 290050.0 232460.0 True False 186969.31889645828 184042.1366057538 196190.91750642675 228972.80113179237 232749.87143663675 217971.01769995817 211354.17925147104 244040.53374775584 237384.23156548236 230400.5852511436 0.8114967186070993 0.7987919666312578 0.8515209164619644 0.9938030360565494 1.010196528723798 0.9460523612054335 0.9173335172785633 1.0592010149702713 1.0303108879117056 1.0 17.813784855877845 -5.169715881587629 3.2859680262412296 0.992553733290909 0.8079122299616616 0.8170671090411229 0.037915169390623026 0.11086222333589968 2.2866634450263588 0.011792532655911164 0.022026269728411162 6.765254181947955e-06 5.169715881587629 -0.18464150332924745 FPQGPPSQMGS(ph)PMGSR ddPTM_KYSE-520_SHP099_60min_R1 4 FPQGPPSQMGSPMGSR 16 0 Q8WXF1 Q8WXF1 PSPC1 Paraspeckle component 1 1 FPQGPPS(0.002)QMGS(0.998)PMGSR;FPQGPPSQMGS(0.999)PMGS(0.001)R;FPQGPPSQMGS(0.997)PMGS(0.003)R;FPQGPPSQMGS(0.984)PMGS(0.016)R 245.67 2.9274000000000004e-23 4079040000.0 873070.0 719750.0 702870.0 646630.0 619310.0 799510.0 668440.0 812310.0 790220.0 774010.0 True False 824639.066678105 685172.1296332249 748178.1248317633 708085.5207836019 668046.1736081173 794519.9615268233 736012.4385457333 809492.2862045793 646735.9678251182 767152.8735706682 1.0749344688495668 0.893136365955499 0.9752660136035365 0.923004456058229 0.8708123199731176 1.0356735781080721 0.9594077841617232 1.0551903200685997 0.8430340159125306 1.0 19.549154572329165 -6.281703778575215 24.940341457334984 0.9809071875998524 0.9446037447465113 0.04147927835216492 0.07405402355577667 2703.052442551008 3326761.318840228 0.02488687816388861 0.021979098924852725 5.227526239428962e-07 6.281703778575215 -0.036303442853341084 FPS(ph)PHPS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 3 FPSPHPSPAK 10 0 O14681-3;O14681;B7ZB74 O14681-3 EI24 Etoposide-induced protein 2.4 homolog 2 FPS(1)PHPS(1)PAK;FPS(1)PHPS(1)PAK;FPS(1)PHPS(1)PAK 59.898 0.025463 1306370000.0 1769970.0 1743030.0 1545380.0 2044790.0 1877810.0 2027630.0 2116970.0 2600180.0 2617340.0 1763960.0 True False 1671786.2357522824 1659292.2224586315 1644997.6674954235 2239126.2268114686 2025582.9637226255 2014974.8090588385 2330973.987236193 2591160.582466577 2142097.0337721095 1748332.686740112 0.9562174570272688 0.9490712122716743 0.9408951053604312 1.2807209084367548 1.158579816693507 1.1525122331356163 1.3332553952202633 1.4820752378072715 1.2252227794048731 1.0 20.737548307847693 -5.258913376128735 24.931220298670926 1.2509800795514114 0.9487622326654744 0.5396685496630542 0.11960955428104174 160.64835987509642 1585561.080928893 0.034076582583470974 0.055662044569320536 5.509175708240044e-06 5.258913376128735 -0.302217846885937 FPSNLEVEAS(ph)PQASSAEVNAS(ph)PLWNLAHVK ddPTM_KYSE-520_SHP099_60min_R1 1 FPSNLEVEASPQASSAEVNASPLWNLAHVK 30 0 O94864;O94864-2;O94864-4 O94864 SUPT7L STAGA complex 65 subunit gamma 2 FPS(0.007)NLEVEAS(0.993)PQAS(0.017)S(0.003)AEVNAS(0.981)PLWNLAHVK 108.0 0.00043352 59614000.0 49252.0 55595.0 50679.0 50677.0 46267.0 59092.0 42360.0 50910.0 71542.0 42258.0 True False 46519.893378572124 52924.1327502037 53945.84942926698 55493.326843404364 49907.94967678026 58723.18490893556 46642.16219376046 50733.40509248334 58551.776227056595 41883.626996226514 1.1106940041931734 1.2635995625443774 1.287993741185003 1.3249408139463186 1.1915861460918056 1.4020558657497881 1.113613255078474 1.211294453965368 1.3979633672206035 1.0 15.354098760282758 -10.036431460678722 5.803331171881066 0.9999993452182901 1.2560678667201965 0.3833521587872877 0.09739390471374997 7.947797473565975e-07 1.3213779270809207e-07 0.0907611770942934 0.022012762398479595 9.195355822700236e-11 10.036431460678722 0.2560685215019064 FPSS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 5 FPSSPLR 7 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 FPS(0.005)S(0.995)PLR;FPS(0.002)S(0.998)PLR;FPS(0.002)S(0.998)PLR;FPS(0.035)S(0.965)PLR;FPS(0.148)S(0.852)PLR 152.89 0.0012584000000000002 9311020000.0 7175030.0 6076540.0 5618390.0 5096070.0 6389600.0 6820840.0 6326520.0 5672430.0 6161180.0 6263530.0 True False 6777016.782832294 5784613.897327506 5980560.409141837 5580398.960610689 6892425.168149112 6778268.607497864 6966066.382485113 5652753.664285121 5042465.02270856 6208039.997152609 1.0916515979182886 0.931793915628876 0.9633572612104451 0.898898680287209 1.1102417463982843 1.0918532436335457 1.1221039789821234 0.9105536798857325 0.8122475088790257 1.0 22.565706421873028 -7.4281649974077135 8.441242715815257 0.8914239639997749 1.0238881779151927 0.2989585950699396 0.08493963549519341 0.39702634329499337 31.9616256664946 0.04938201377710835 0.02356557488764697 3.731083793164875e-08 7.4281649974077135 0.13246421391541785 FPTTATKIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 FPTTATKISPK 11 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YHI8;H0YIS4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 FPTTATKIS(1)PK;FPTTATKIS(1)PK 188.19 1.4238999999999998e-06 4441300000.0 5995400.0 6037600.0 5457300.0 3878380.0 4387680.0 4618400.0 3902300.0 4193500.0 6414200.0 4434300.0 True False 5662823.210466407 5747544.633377639 5809086.289988733 4246980.069122534 4732965.453515789 4589574.8524915045 4296782.566777893 4178953.7272702577 5249542.968823715 4395015.551833201 1.2884648856599363 1.3077415917175277 1.321744194412625 0.9663174154983547 1.0768939034906544 1.044268171150646 0.9776490017164253 0.9508393492549025 1.1944310337273056 1.0 22.067436839701486 -5.255551946652557 24.91198912648526 1.028368625242423 1.306159382826809 0.7842429391430616 0.0663182616752456 196.16793050776556 830059.2499483303 0.017706220724742133 0.029633214513636385 5.551982050089642e-06 5.255551946652557 0.2777907575843861 FQDALESLLS(ph)WMVDTEELVANQK ddPTM_KYSE-520_SHP099_60min_R1 1 FQDALESLLSWMVDTEELVANQK 23 0 Q03001;F8W9J4;Q03001-14;F6QMI7;E9PHM6;Q03001-8;A0A0U1RQJ2 Q03001 DST Dystonin 1 FQDALES(0.033)LLS(0.912)WMVDT(0.055)EELVANQK 52.97 0.044823 106370000.0 237030.0 205790.0 180370.0 198860.0 208930.0 256180.0 213520.0 230620.0 219220.0 226760.0 True False 223881.4733924098 195903.5395029124 191996.93880220383 217759.59461056077 225371.60235091302 254581.08559485414 235104.68535438468 229820.03304711287 179415.1740864852 224751.0828166103 0.9961307887227842 0.8716466993076222 0.8542647999559014 0.9688923046846705 1.0027609189977031 1.1327246231893984 1.0460669751087366 1.0225536187277846 0.7982839140885575 1.0 17.77796854087905 -3.9272407063742443 20.62721551066418 0.9701947768189085 1.8179069714403988 0.0073723431961350006 0.09464112160350936 2605.2473957895695 1556196.3111984336 0.024773658041264524 112564.61164933913 0.0001182386040275026 3.9272407063742443 0.8477121946214903 FQEAEERPK ddPTM_KYSE-520_SHP099_60min_R1 2 FQEAEERPK 9 1 Q92598-2;Q92598-3;Q92598;Q92598-4;A0A0A0MSM0 Q92598-2 HSPH1 Heat shock protein 105 kDa 0 ; 71.03 0.024293000000000002 1561180000.0 3006800.0 2605800.0 1967400.0 1896180.0 2731600.0 2739900.0 1933330.0 2366500.0 2499000.0 2240600.0 False True 2840006.8100928003 2480613.4566144575 2094221.7519512982 2076392.377092696 2946561.379322044 2722799.267785698 2128769.8638825067 2358291.163845252 2045244.5946634728 2220750.0271604247 1.2788502872266951 1.1170160649671628 0.9430245306037831 0.9349959931094485 1.326831630433292 1.2260719281706918 0.958581487266476 1.0619345423855269 0.9209701990991922 1.0 21.08261557820538 -6.780066099073959 24.859670492931386 0.9905327325067236 1.1273745399430213 0.26239154859719194 0.124345749056497 405.0192772543303 540543.1342643698 0.05689619731084041 0.038437912340074674 1.659334339618152e-07 6.780066099073959 0.1368418074362977 FQELLAS(ph)PAYR ddPTM_KYSE-520_SHP099_60min_R1 6 FQELLASPAYR 11 0 Q9NSI2-2;Q9NSI2 Q9NSI2-2 FAM207A Protein FAM207A 1 FQELLAS(1)PAYR;FQELLAS(1)PAYR;FQELLAS(1)PAYR;FQELLAS(1)PAYR;FQELLAS(1)PAYR;FQELLAS(1)PAYR 193.62 6.5895e-07 1385030000.0 1605149.0 1587949.0 1377280.0 1253934.0 1281202.0 1277031.0 1285987.0 1400202.0 1600045.0 1394143.0 True False 1516108.1851847998 1511661.5464799576 1466061.6725259137 1373107.5103509952 1382025.308357796 1269060.575838404 1415987.115983651 1395345.0260716046 1309517.161852068 1381791.9776468421 1.0972043619522924 1.0939863387065543 1.060985804116898 0.9937150689565905 1.0001688609535504 0.9184165173686875 1.0247469509810314 1.0098083131498874 0.947694865099842 1.0 20.39810901037129 -5.150464729177869 2.016530347225589 0.9827663367210183 1.0975854191011003 0.7177341401246276 0.029094130737350295 0.1787957659289587 1.4122562217891645 0.008807730459010864 0.01956587612188689 7.0718863201569174e-06 5.150464729177869 0.11481908238008198 FQESEERPK ddPTM_KYSE-520_SHP099_60min_R1 5 FQESEERPK 9 1 P34932 P34932 HSPA4 Heat shock 70 kDa protein 4 0 ;;;; 142.83 0.00041717 3436840000.0 3851520.0 3764150.0 2687370.0 2505920.0 3635210.0 3715280.0 2807890.0 3384420.0 3386940.0 3316850.0 False True 3637868.5077852267 3583314.583895662 2860602.1701440313 2744081.8833676768 3921280.345484435 3692091.5594068626 3091738.92356558 3372680.23694957 2771957.073809326 3287465.289470251 1.106587655674211 1.0899931309915318 0.8701543341937443 0.8347105267261585 1.1927974899215796 1.1230815337374447 0.9404628342292822 1.0259211702560822 0.8431897616342605 1.0 21.648544231189646 -7.728458315284327 24.845575392044747 0.9215947787023067 1.0200775737949817 0.11316543403222179 0.11327818680585686 373.55559906486894 281410.9065147753 0.08122684165618686 0.03069614218292441 1.868709032208974e-08 7.728458315284327 0.09848279509267499 FQETEFLS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 4 FQETEFLSPPR 11 0 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 FQET(0.001)EFLS(0.999)PPR;FQETEFLS(1)PPR;FQETEFLS(1)PPR;FQETEFLS(1)PPR 127.71 0.00016964 4785700000.0 6694400.0 7537800.0 6322600.0 7426200.0 5904700.0 6068700.0 5883600.0 6596900.0 7783200.0 6499400.0 True False 6323048.287044457 7175672.77353154 6730164.912517677 8131983.815231564 6369366.296852703 6030822.9922300335 6478371.706402481 6574016.893628028 6369967.078505304 6441820.372456685 0.9815623413033897 1.1139200348107487 1.0447613443699655 1.2623735753330716 0.9887525464209195 0.9361985655508256 1.0056740691035222 1.0205216093476583 0.9888458091351624 1.0 22.61903700164083 -5.90928883248129 24.99932275878498 0.9890594230919075 1.1011053048027704 0.3805844622103477 0.0691502621419079 19.907323084129512 5479.706317449289 0.021147196357198743 0.02397866882853969 1.2322850154891283e-06 5.90928883248129 0.11204588171086283 FQNLDKK ddPTM_KYSE-520_SHP099_60min_R1 1 FQNLDKK 7 1 C9JEY1;C9K057;A0A1W2PNV4;O15143 C9JEY1 ARPC1B Actin-related protein 2/3 complex subunit 1B 0 73.931 0.056591999999999996 363300000.0 271620.0 262880.0 205930.0 184180.0 271380.0 243680.0 192910.0 221330.0 282310.0 227320.0 False True 256552.6971389541 250250.85020907523 219204.57729964983 201684.4118242637 292736.0620590189 242159.10273149348 212411.22542016854 220562.25788881036 231049.62045596042 225306.12165228368 1.1386849822700045 1.11071482822508 0.9729188700782379 0.8951572657911376 1.2992814394577359 1.0748003691849044 0.94276721760798 0.9789448074970881 1.0254919784760252 1.0 17.781526987110954 -6.7277910814253605 14.17345279539697 0.9850524869666133 1.0796824628888768 0.1755059398827563 0.10090786137982621 3.8240439557250503 1608.8028533747101 0.04076277922218466 0.031518708920141275 1.8715822537227949e-07 6.7277910814253605 0.09462997592226352 FQPHFGQQECVS(ph)PYR ddPTM_KYSE-520_SHP099_60min_R1 3 FQPHFGQQECVSPYR 15 0 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7 P25054-2 APC Adenomatous polyposis coli protein 1 FQPHFGQQECVS(1)PYR;FQPHFGQQECVS(1)PYR;FQPHFGQQECVS(1)PYR 218.79 1.9974e-14 1463670000.0 834780.0 828820.0 769960.0 691260.0 721180.0 754740.0 680080.0 695230.0 895630.0 749040.0 True False 788473.0893073264 789002.2431158177 819592.8535795577 756957.1425651035 777932.7630471049 750029.3877034123 748829.1233411848 692818.4093979025 733006.1689949771 742404.088344301 1.062053808278141 1.0627665654097342 1.1039713633681651 1.0196026051705325 1.0478562487203424 1.010271090203877 1.0086543637053682 0.9332093131962895 0.9873412343804802 1.0 19.50184512969999 -6.303301746463494 0.9608811038600901 0.9715527203127028 1.0709578484946622 0.6895045932153889 0.02524142577183051 0.2948791559872615 0.5766529386606433 0.014963929050705736 0.013123357854654039 4.973913789026087e-07 6.303301746463494 0.09940512818195946 FQPQLNPDVVAPLPTHTAHEDFTFGES(ph)RPELGSEGLGSAAHGSQPDLRR ddPTM_KYSE-520_SHP099_60min_R1 1 FQPQLNPDVVAPLPTHTAHEDFTFGESRPELGSEGLGSAAHGSQPDLRR 49 2 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 FQPQLNPDVVAPLPT(0.031)HT(0.031)AHEDFT(0.064)FGES(0.219)RPELGS(0.219)EGLGS(0.219)AAHGS(0.219)QPDLRR 88.76799999999999 0.00012624 1095100000.0 18625.0 34660.0 57605.0 85044.0 23770.0 27139.0 29068.0 0.0 25454.0 38919.0 True False 17591.834121982993 32994.881574279345 61318.31047125881 93126.5561905891 25640.563767200518 26969.615434299103 32006.47711634156 0.0 20832.19524312289 38574.2079385238 0.456051726324992 0.8553612202968289 1.589619430915667 2.4142182346039625 0.6647074596596826 0.6991618720280898 0.8297377659017829 0.0 0.5400550356425573 1.0 15.235348913146613 -5.9643381311667465 24.999921550911928 0.5778024909067647 1.3418539983253974 0.2969695387031501 0.5314512640891232 228.05480443612862 159871.55778495476 0.1770829335439222 0.2007925510948007 1.0855800881348085e-06 5.9643381311667465 0.7640515074186327 FQPSSVLS(ph)PYER ddPTM_KYSE-520_SHP099_60min_R1 2 FQPSSVLSPYER 12 0 J3QLM6;Q7Z6J9 J3QLM6 TSEN54 tRNA-splicing endonuclease subunit Sen54 1 FQPSS(0.001)VLS(0.999)PYER;FQPS(0.016)S(0.01)VLS(0.975)PYER 129.04 7.5508e-05 776590000.0 500820.0 453830.0 443360.0 414340.0 389230.0 428340.0 385420.0 435390.0 529830.0 472800.0 True False 473038.51624008105 432027.3255872824 471939.6950010818 453718.7490241367 419860.1865842432 425666.5711753447 424382.014936713 433879.73371078965 433626.22792738996 468611.3598328344 1.009447394550627 0.9219309701356739 1.0071025490492478 0.9682196974183249 0.8959667275970817 0.9083573461112654 0.9056161487167124 0.9258839432863206 0.9253429709473443 1.0 18.838032402124522 -5.65742043334657 6.844540052757023 0.9212994755116094 0.9758402262780014 0.3205258310665774 0.03509287834951625 0.2366908236166094 13.745617459577256 0.009808234527890423 0.012669642784888418 2.200794878111233e-06 5.65742043334657 0.05454075076639198 FQQDDAHIFCAMEQIEDEIK ddPTM_KYSE-520_SHP099_60min_R1 1 FQQDDAHIFCAMEQIEDEIK 20 0 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 0 186.06 1.2328e-12 204380000.0 159480.0 136990.0 87735.0 138610.0 118670.0 116910.0 115670.0 130210.0 92881.0 87300.0 False True 150633.3264845017 130408.79477381779 93390.53848096343 151783.45272538386 128008.65386006261 116180.32132443732 127363.05243041253 129758.33190124256 76016.15173947111 86526.58991837234 1.7408905935921726 1.507152828937823 1.0793276213597047 1.7541827647267008 1.479414061975905 1.3427123550580207 1.4719527552231584 1.4996353378037235 0.8785293839868579 1.0 16.40085592557643 -7.759073303136298 24.99994362273042 0.9392645114801765 1.475351620158426 0.5887396745365698 0.18212431381693697 40.38814647024688 426779.23967244907 0.13609764883466677 0.0458839129788346 1.741512904351629e-08 7.759073303136298 0.5360871086782495 FQRPGDPQSAQDK ddPTM_KYSE-520_SHP099_60min_R1 1 FQRPGDPQSAQDK 13 1 Q15637-5;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-6;H7C561 Q15637-5;Q15637-6 SF1 Splicing factor 1 0 58.831 0.047846 254570000.0 277580.0 258330.0 172190.0 272360.0 306390.0 307180.0 226720.0 305920.0 294220.0 260250.0 False True 262182.08405798883 245919.43903876486 183289.6429137413 298245.0125119803 330501.14987936744 305262.7756773644 249639.07017397016 304858.83492226445 240797.06468262826 257944.3874714364 1.016428721819046 0.9533816240370683 0.7105781393830015 1.1562376504315552 1.281288393669607 1.1834441472822035 0.9678019073069154 1.1818781478857459 0.9335231793298586 1.0 17.97670053013377 -5.290575025177768 24.88003978343854 1.1136222193692824 0.8994546442352683 0.359324226397993 0.1258318933641368 686.0602472849118 585851.5863002324 0.0361635509863437 0.0536497006120036 5.1218278209533e-06 5.290575025177768 -0.21416757513401408 FQS(ph)LGVAFYR ddPTM_KYSE-520_SHP099_60min_R1 2 FQSLGVAFYR 10 0 C9IZZ0;C9J592;C9J8S3;P51149 C9IZZ0 RAB7A Ras-related protein Rab-7a 1 FQS(1)LGVAFYR;FQS(1)LGVAFYR 149.69 0.00016061 588530000.0 283940.0 318800.0 258418.0 370730.0 356810.0 356690.0 297680.0 392800.0 468760.0 333570.0 True False 268189.2821796428 303484.3694714444 275076.03776341944 405964.0677359614 384888.9170288099 354463.7654025622 327772.39947683236 391437.4684802092 383645.0004779709 330614.829313533 0.8111834630542542 0.9179393740491905 0.832013610322832 1.2279064087321148 1.1641610808201437 1.0721351070021499 0.991402594243572 1.1839682729687726 1.1603986465898892 1.0 18.334791910795055 -5.2498538342326295 24.991395125860624 1.1171493081245794 0.8601348486832311 0.7073918120022311 0.07674856242385916 419.7560744694359 905462.0999450746 0.021415926750895726 0.03670780835846968 5.625306181425854e-06 5.2498538342326295 -0.25701445944134826 FQS(ph)PQIQATIS(ph)PPLQPK ddPTM_KYSE-520_SHP099_60min_R1 2 FQSPQIQATISPPLQPK 17 0 A0A087WYN9;Q7Z478 A0A087WYN9 DHX29 ATP-dependent RNA helicase DHX29 2 FQS(1)PQIQAT(0.004)IS(0.996)PPLQPK;FQS(1)PQIQATIS(1)PPLQPK 184.2 3.8204e-12 459280000.0 1178170.0 1150920.0 1058220.0 1033580.0 1070290.0 1009650.0 1011080.0 1020170.0 1229960.0 1077960.0 True False 1112814.561476332 1095628.0756338597 1126434.5544118658 1131811.1324428406 1154515.7338829224 1003348.3998393484 1113289.8335898812 1016631.2683794674 1006630.2687684215 1068410.1130401895 1.041561239353855 1.0254752011998658 1.0543091465191827 1.0593414631973501 1.080592292970456 0.9391041769384734 1.0420060798769353 0.9515365457245776 0.9421759083728889 1.0 20.027034106310133 -6.2578646341021305 24.999967184348275 0.9761256721057197 1.0512757694475086 0.6052835270166241 0.031195791403970313 229.32412666535748 1603778.9286365993 0.01058640600664828 0.010201518477114245 5.522495439455008e-07 6.2578646341021305 0.0751500973417889 FQSPQIQAT(ph)ISPPLQPK ddPTM_KYSE-520_SHP099_60min_R1 1 FQSPQIQATISPPLQPK 17 0 A0A087WYN9;Q7Z478 A0A087WYN9 DHX29 ATP-dependent RNA helicase DHX29 1 FQSPQIQAT(0.844)IS(0.156)PPLQPK 289.02 7.1571999999999994e-37 1704800000.0 653210.0 1077700.0 683170.0 603710.0 620080.0 885890.0 652710.0 926160.0 963050.0 878800.0 True False 616975.1391581475 1025925.6743393202 727208.2313106479 661086.4168879694 668876.7682274173 880360.8319057899 718692.296635727 922947.3671273689 788184.3965148694 871014.5156960533 0.7083408233043104 1.1778514087328071 0.8348979474004684 0.7589843854205757 0.7679283825630601 1.010730379392435 0.8251209178315461 1.05962340523087 0.9049038590189373 1.0 19.732337236370263 -7.254667710196456 24.917600521960974 0.9866977245168412 0.8769982792529314 0.1405497326622136 0.13390847171517548 1103.9382365816411 4062157.9690486356 0.064421529588072 0.03611066200940803 5.5632975657942954e-08 7.254667710196456 -0.10969944526390984 FQSPQIQATIS(ph)PPLQPK ddPTM_KYSE-520_SHP099_60min_R1 4 FQSPQIQATISPPLQPK 17 0 A0A087WYN9;Q7Z478 A0A087WYN9 DHX29 ATP-dependent RNA helicase DHX29 1 FQSPQIQATIS(1)PPLQPK;FQSPQIQAT(0.002)IS(0.998)PPLQPK;FQSPQIQATIS(1)PPLQPK;FQSPQIQATIS(1)PPLQPK 246.9 9.9374e-28 2540110000.0 1437900.0 2023770.0 1363810.0 1191780.0 1183920.0 1697990.0 1302710.0 1608750.0 1816680.0 1904070.0 True False 1358136.8206174138 1926545.0514592999 1451723.3747731522 1305046.4128782763 1277087.7684166618 1687392.2145725896 1434400.6400244022 1603169.6217350713 1486816.7067760068 1887201.4211440452 0.7196565270675211 1.0208476052817956 0.7692466519514908 0.6915247086276254 0.6767098382336291 0.8941240694645467 0.7600675921253018 0.8494957685879707 0.7878420872927702 1.0 20.84781697942617 -10.195462746417938 6.874853673019101 1.000000591330067 0.799134140594282 0.27882192933808103 0.09805478007098815 9.011833739732518e-07 1.0537289119302933e-07 0.0962674754502458 0.023348223443604214 6.375837703335242e-11 10.195462746417938 -0.2008664507357849 FQVPTAHSEMQPLDPAAASIS(ph)DGDCDAR ddPTM_KYSE-520_SHP099_60min_R1 2 FQVPTAHSEMQPLDPAAASISDGDCDAR 28 0 Q5T586;A0A0A0MRW2;Q5T593;A0A0A0MRW3;Q8IW50-5;Q8IW50-6;Q8IW50;A0A0A0MRV9;Q8IW50-7 Q5T586 FAM219A Protein FAM219A 1 FQVPTAHSEMQPLDPAAAS(0.002)IS(0.998)DGDCDAR;FQVPTAHSEMQPLDPAAAS(0.067)IS(0.933)DGDCDAR 166.07 2.8567e-10 727320000.0 884120.0 753730.0 685680.0 523290.0 663920.0 734630.0 652630.0 851570.0 885260.0 746020.0 True False 835076.1011504761 717519.6794282054 729880.0299267903 573023.3242671241 716166.7268119385 730044.9016728371 718604.2094550018 848616.1024279326 724519.0995885507 739410.8431947781 1.129380382822568 0.9703937750331232 0.9871102603434811 0.7749728443138023 0.9685640039001746 0.9873332375253338 0.9718605239140435 1.1476922609916167 0.9798599875248185 1.0 19.496016674722355 -7.03890059971585 24.41288394314611 1.0502210017068367 0.9630623920882684 0.11565690452564303 0.09014666413917993 795.5854120373568 499282.7764113217 0.043267956597982105 0.024988128286881548 9.143224854712535e-08 7.03890059971585 -0.08715860961856836 FRDEATCK ddPTM_KYSE-520_SHP099_60min_R1 4 FRDEATCK 8 1 P00533;E9PFD7;Q504U8;P00533-3;P00533-4;P00533-2;A0A1W2PRR9 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 0 ;;; 118.67 0.0010635 2551230000.0 2633160.0 2747890.0 2021320.0 2374980.0 2915140.0 2853480.0 2446120.0 2994480.0 3111370.0 2455280.0 False True 2487093.3657256747 2615877.23973302 2151617.521426348 2600697.385136228 3144544.9331222964 2835670.372875341 2693397.6814306253 2984092.847796883 2546423.6392549383 2433528.129378936 1.0220113487491962 1.074931992013021 0.88415559921038 1.068694194958805 1.2921752969113285 1.165250706840622 1.1067871576721866 1.226241361984362 1.046391701214818 1.0 21.214618020283694 -5.525873624739624 24.983054854181344 1.1531676178182242 0.9975898729572621 0.33950855404675884 0.09014822066580164 89.36818495424231 745495.5250181387 0.025567352370795243 0.03319137683891368 2.979383273416738e-06 5.525873624739624 -0.1555777448609621 FRDPDLR ddPTM_KYSE-520_SHP099_60min_R1 2 FRDPDLR 7 1 B0QYY6;B0QYV1;B0QYY4;F8VZG9;B7Z1U7;J3KNW3;F8VRS4;A0A0G2JRA5;A0A0G2JSB3;J3QRF4;F8VR27;A0A087X2B1;J3QQZ2;F8VZY7;I3L1D4;B0QYY7;S4R469;A0A286YEU2;A0A3B3ITL7;A6NFN3;O43251-4;O43251-7;A6NFN3-2;O43251-8;O43251-6;O43251-9;Q9NWB1-2;Q9NWB1;O43251-10;O43251-5;Q9NWB1-5;Q9NWB1-4;Q9NWB1-3;O43251-3;O43251-2;O43251 B0QYY6 RBFOX2;RBFOX1;RBFOX3 RNA binding protein fox-1 homolog;RNA binding protein fox-1 homolog 3;RNA binding protein fox-1 homolog 2;RNA binding protein fox-1 homolog 1 0 ; 90.65700000000001 0.0080512 1165950000.0 1349410.0 1295710.0 992190.0 740960.0 1212410.0 1365400.0 932680.0 1072760.0 1086230.0 1177630.0 False True 1274555.5373178544 1233462.14669964 1056148.1549601294 811380.6156222525 1307819.769330737 1356878.032130588 1026964.3964796157 1069038.8459440658 888998.0136299754 1167197.1143822765 1.091979685018666 1.0567727862764922 0.9048584356028687 0.6951530342427764 1.1204789261519748 1.162509755559752 0.8798551537056557 0.9159025778690691 0.7616519974867019 1.0 20.154616790976092 FRDQDLAS(ph)CDRDR ddPTM_KYSE-520_SHP099_60min_R1 1 FRDQDLASCDRDR 13 2 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 FRDQDLAS(1)CDRDR 51.265 0.060020000000000004 953190000.0 318490.0 230120.0 270540.0 198330.0 210150.0 235740.0 248190.0 252960.0 289320.0 266720.0 True False 300822.7248059254 219064.6897828381 287979.44127930497 217179.22356991106 226687.6094100629 234268.65921668688 273279.46730097785 252082.5408013076 236786.78116368005 264357.06830502005 1.1379409173157822 0.828669689777605 1.0893578262376136 0.8215374189250945 0.8575053841515089 0.88618269493889 1.0337513161768876 0.9535683778670526 0.8957081521666411 1.0 18.012128376046043 -4.242125396631625 23.695235181849405 0.929398304549846 1.1379413063334494 0.3517700630981556 0.08485094729973978 2427.814994765185 2978455.0099182096 0.020705356462980117 0.6902292444268951 5.726306677878302e-05 4.242125396631625 0.2085430017836034 FRDQDLASCDR ddPTM_KYSE-520_SHP099_60min_R1 2 FRDQDLASCDR 11 1 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 0 ; 69.229 0.02795 1058420000.0 278780.0 282160.0 202193.0 184636.0 263720.0 263020.0 183669.0 206159.0 240260.0 238770.0 False True 263315.517665848 268604.61006920575 215226.68430023856 202183.7499271622 284473.26363845705 261378.39461768465 202236.0549566995 205443.88254687228 196634.840461723 236654.68356024925 1.1126571158639726 1.1350065252387977 0.9094545734838356 0.8543407926075919 1.2020605692599098 1.1044716744477237 0.8545618109654389 0.8681166983731758 0.8308935090721004 1.0 17.852423948730635 -6.768397218664253 24.984273012697827 0.8774026951575465 1.0479471037877552 0.3626287707988848 0.10638489869468355 192.38365524785516 690804.8847141925 0.04703693648745173 0.032491466067044145 1.7045226686436645e-07 6.768397218664253 0.1705444086302087 FRDQDLASCDRDR ddPTM_KYSE-520_SHP099_60min_R1 1 FRDQDLASCDRDR 13 2 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 0 153.7 2.7277999999999995e-06 446520000.0 175430.0 187930.0 137170.0 121860.0 174190.0 153120.0 117290.0 135970.0 192630.0 140910.0 False True 165698.5481889652 178901.56071131886 146012.19767976002 133441.5377614551 187897.76199447448 152164.32128302002 129146.81784008881 135498.3518056366 157653.2478071328 139661.64702632115 1.1864284269663312 1.2809641338226694 1.0454709706541125 0.95546301080286 1.3453783912419603 1.0895211715091873 0.9247121209715458 0.9701901322995288 1.1288227739246186 1.0 17.09157636603857 -6.526873511544918 24.354460676995895 1.003971274752006 1.1578956190638143 0.2991137202562344 0.11302870418373373 116.00770609268919 707233.612627616 0.04449111463897243 0.034631496978379146 2.9725316568015977e-07 6.526873511544918 0.15392434431180835 FREDHNCK ddPTM_KYSE-520_SHP099_60min_R1 2 FREDHNCK 8 1 H0YAK0;H0YAH3;Q86SF2 H0YAK0 GALNT7 Polypeptide N-acetylgalactosaminyltransferase;N-acetylgalactosaminyltransferase 7 0 ; 93.14299999999999 0.0038482 836910000.0 695340.0 776230.0 456290.0 494890.0 757340.0 701650.0 551120.0 667760.0 671830.0 400690.0 False True 656768.1040740756 738938.7456550162 485703.1834898134 541924.1968058966 816938.3493248485 697270.7420861484 606832.5880128726 665443.6964163557 549842.607456087 397140.19833210314 1.6537437077192123 1.8606495861118761 1.223001815302642 1.364566465650802 2.0570527807454404 1.7557294502408065 1.5280059549786926 1.6755888706584352 1.384505043219746 1.0 18.599288871560134 -8.062003095967373 2.688941144188545 1.0003824505281895 1.638720109719074 0.4389088812825567 0.22398658968613033 0.32648334382089494 5.522777242794015 0.22716042273844042 0.06128371390641462 8.669556954445673e-09 8.062003095967373 0.6383376591908845 FREDHPDLIQNAK ddPTM_KYSE-520_SHP099_60min_R1 1 FREDHPDLIQNAK 13 1 E9PKP7;P17480-2;P17480 E9PKP7 UBTF Nucleolar transcription factor 1 0 88.552 0.0029131 620440000.0 308990.0 283990.0 199340.0 203810.0 306160.0 256010.0 215670.0 222890.0 243200.0 237870.0 False True 291849.70874370623 270346.69412231975 212189.7753552768 223180.04112228908 330253.0501878886 254412.14662791224 237472.0283363624 222116.84661291682 199041.01057309183 235762.6568600599 1.2378962496886754 1.1466900556808182 0.9000143541868247 0.9466301580354203 1.400786089647415 1.0791028147384765 1.0072503911309292 0.9421205612929501 0.8442431605749815 1.0 17.84697569814351 -6.960551838231024 2.555573798598555 0.921785852741977 1.1148818795135436 0.2862304334082887 0.1362361599011599 0.41751112948415425 5.485735158201861 0.07554809699543798 0.043581281052959275 1.0950858359977686e-07 6.960551838231024 0.19309602677156656 FRELAEEAAR ddPTM_KYSE-520_SHP099_60min_R1 4 FRELAEEAAR 10 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;; 199.19 1.7400999999999999e-06 2731000000.0 1889620.0 1884490.0 1430420.0 1091240.0 1885320.0 1708590.0 1336240.0 1288940.0 1637220.0 1552210.0 False True 1784799.0117359173 1793956.2717228394 1522627.1619529196 1194951.1215067292 2033683.9579965698 1697926.0560407203 1471320.1796456687 1284468.967980858 1339942.1189575566 1538458.6270011056 1.1601215530995457 1.166073783355339 0.9897095282444832 0.77671969888201 1.3218970743209388 1.1036540250357347 0.9563599266323406 0.8349064092055918 0.8709640255776561 1.0 20.553054215840667 -6.913322273835151 4.210534093662087 0.8902957455911432 1.0816025182371438 0.2743121109401262 0.13738611566464817 0.30321511050706945 10.019568314292513 0.06390402938938056 0.041626530052434954 1.2208933442441012e-07 6.913322273835151 0.1913067726460006 FRFS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 1 FRFSGR 6 1 Q9H329-2;H7C3Q2;Q9H329 Q9H329-2 EPB41L4B;HECW1 Band 4.1-like protein 4B 1 FRFS(1)GR 81.548 0.014834 229800000.0 69226.0 56066.0 43459.0 49081.0 52012.0 55859.0 46155.0 52917.0 61969.0 48564.0 True False 65385.895781390325 53372.50520321831 46260.43667685855 53745.643483259264 56105.04849220163 55510.36326115603 50820.79782939125 52733.443277920625 50716.99171136488 48133.76074222029 1.3584206754914416 1.1088372148823784 0.9610808705475082 1.1165893263793232 1.1656070007218315 1.1532521541053282 1.0558243745291658 1.0955604229707683 1.0536677568781514 1.0 15.554761526562844 -4.270995277123991 4.819507826742633 1.08254702309941 1.3717187305034526 0.6599695597965096 0.06037970319927755 0.10511265507707815 7.064225837933105 0.015703761828949482 0.10055407159652473 5.35802484239317e-05 4.270995277123991 0.2891717074040425 FRIDELEPR ddPTM_KYSE-520_SHP099_60min_R1 7 FRIDELEPR 9 1 Q14697;Q14697-2;F5H6X6 Q14697 GANAB Neutral alpha-glucosidase AB 0 ;;;;;; 166.66 0.00011594 4209018000.0 4128998.0 3562987.0 2555803.0 2291601.0 4066283.0 3556397.0 2745801.0 2727975.0 2945278.0 2964284.0 False True 3899954.2499865494 3391815.7563674767 2720554.1508093886 2509394.0700450377 4386276.338114573 3534200.2071445156 3023373.36151534 2718512.2914391514 2410489.759616344 2938022.7499380577 1.3274077779243785 1.1544552391362477 0.9259813086426053 0.8541098158950414 1.4929347766987333 1.202917917234993 1.0290503576185996 0.9252863312567834 0.820446254089477 1.0 21.486414136455856 -7.05474870009466 3.16270153511437 0.905874127243823 1.1490353421911328 0.28047414048093144 0.1752762190026269 0.38270273868355376 7.55754907971579 0.09721257939679503 0.05421685640411221 8.815588301396972e-08 7.05474870009466 0.2431612149473098 FRLS(ph)LFSDLPEDTELQR ddPTM_KYSE-520_SHP099_60min_R1 10 FRLSLFSDLPEDTELQR 17 1 Q9BST9 Q9BST9 RTKN Rhotekin 1 FRLS(1)LFSDLPEDTELQR;FRLS(1)LFSDLPEDTELQR;FRLS(1)LFSDLPEDTELQR;FRLS(1)LFSDLPEDTELQR;FRLS(0.981)LFS(0.019)DLPEDTELQR;FRLS(0.988)LFS(0.012)DLPEDTELQR;FRLS(0.999)LFS(0.001)DLPEDTELQR;FRLS(1)LFSDLPEDTELQR;FRLS(1)LFSDLPEDTELQR;FRLS(1)LFSDLPEDTELQR 285.46 1.2014999999999998e-37 2765370000.0 1093041.0 1400500.0 1199103.0 1193793.0 1283626.0 1176740.0 1145609.0 1431985.0 1691978.0 1592807.0 True False 1032407.8368067862 1333217.8778066435 1276399.0980126362 1307250.7277930465 1384640.0633671244 1169395.5291704608 1261418.3377863958 1427017.7782628115 1384757.4464944052 1578695.9691650935 0.6539624202326834 0.8445057844239172 0.8085148267577261 0.8280573038293098 0.8770783548015283 0.7407351079694625 0.7990255010618083 0.9039218482438399 0.8771527092874923 1.0 20.590301927975812 -13.99999998682798 0.0713585099788918 1.6535003770126486 0.5906127029791084 0.5762455461762234 0.05796443448100006 238.56267449556478 1.2205249372376923 25.230348760334937 3.015830131610399 1.0000000303296972e-14 13.99999998682798 -1.0628876740335402 FRLSLFS(ph)DLPEDTELQR ddPTM_KYSE-520_SHP099_60min_R1 1 FRLSLFSDLPEDTELQR 17 1 Q9BST9 Q9BST9 RTKN Rhotekin 1 FRLS(0.376)LFS(0.623)DLPEDTELQR 120.66 0.0001569 39806000.0 47688.0 60975.0 51511.0 54492.0 49117.0 52032.0 47482.0 64085.0 71067.0 72694.0 True False 45042.65157632883 58045.66947465905 54831.481480514085 59670.90329638282 52982.22846249844 51707.24898770956 52281.943939663215 63862.70409255147 58163.02425328096 72049.98771507625 0.6251583519271551 0.8056305256317645 0.7610199976347916 0.8281875568439113 0.735353747345776 0.7176579847894959 0.7256343213605209 0.8863666201457018 0.8072593222817512 1.0 16.136710563961962 -8.152347571365969 0.8095877739188483 0.9982967041369106 0.7475496779640384 0.6066623035623038 0.061371417842765785 0.5642463867391737 0.7991387020724244 0.05934229511253694 0.021350788182468567 7.041293198103621e-09 8.152347571365969 -0.25074702617287226 FRLT(ph)PPS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 6 FRLTPPSPVR 10 1 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 2 FRLT(1)PPS(1)PVR;FRLT(1)PPS(1)PVR;FRLT(1)PPS(1)PVR;FRLT(1)PPS(1)PVR;FRLT(1)PPS(1)PVR;FRLT(1)PPS(1)PVR 89.992 0.0031078000000000004 1051600000.0 686802.0 635865.0 579404.0 599142.0 619271.0 628010.0 587689.0 625432.0 711898.0 582424.0 True False 648703.723954157 605317.0909471763 616753.3089191774 656084.275541389 668004.1045299966 624090.3566415183 647098.3394119188 623262.5223689263 582635.2686881704 577264.1764790155 1.1237553799213424 1.048596319694161 1.0684073844336284 1.1365407767776816 1.15718960529379 1.0811174191478778 1.1209743576309414 1.0796833542841247 1.0093043920409464 1.0 19.13887217263947 -7.711734899932476 3.143573668054584 0.999368688401609 1.1038558826331337 0.6246125064760233 0.03075852852964678 0.17384356357212333 3.2344732655484383 0.029309746510505826 0.00867511927383061 1.9420709860130613e-08 7.711734899932476 0.10448719423152475 FRPLNESEVNRGDK ddPTM_KYSE-520_SHP099_60min_R1 1 FRPLNESEVNRGDK 14 2 P33176 P33176 KIF5B Kinesin-1 heavy chain 0 180.11 3.8646e-09 535550000.0 307030.0 312520.0 201900.0 192130.0 239570.0 265250.0 200370.0 202020.0 215130.0 211590.0 False True 289998.4338508694 297506.0700979165 214914.79705142157 210389.97743400914 258422.79603316094 263594.4763605081 220625.3550227522 201319.23977182255 176067.81498597586 209715.47721452903 1.3828184629130387 1.4186176149201513 1.0247922561841913 1.0032162634271868 1.23225428788361 1.2569147487901593 1.0520222825378924 0.9599636729047064 0.8395556557128437 1.0 17.67807381215496 -1.0000000000016833 0.26255084703121995 0.9513918196991518 4.1210853227292 0.5295026673415382 0.12563690038997855 45.15224521151173 0.6250857137768507 0.16917211650611283 64.25869161631766 0.0999999999996124 1.0000000000016833 3.169693503030048 FRPSLEER ddPTM_KYSE-520_SHP099_60min_R1 2 FRPSLEER 8 1 P35221;G3XAM7;P35221-2;P26232;P26232-5;P26232-2;P26232-3;H0YBB8 P35221 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 0 ; 166.61 0.00018074 983170000.0 849850.0 791450.0 506750.0 544910.0 789680.0 817630.0 626770.0 693360.0 737120.0 675590.0 False True 802707.1263660262 753427.5540093303 539415.915828668 596698.0825668343 851823.3233354198 812526.8678855505 690130.0282857243 690954.8959914398 603277.5892830495 669604.7982010664 1.198777440846522 1.1251824300444961 0.8055735521576927 0.8911197831465658 1.2721284638698742 1.2134424216619306 1.0306527523993259 1.0318846248529456 0.9009457382978602 1.0 19.35295034031205 -7.500039375809519 2.9355381198139106 0.9521333152274727 1.073464391934517 0.11321937784269098 0.13780784353373945 0.702162178220302 11.796346182680194 0.11532236219562708 0.04130662221641785 3.161990961618429e-08 7.500039375809519 0.12133107670704435 FRRS(ph)ET(ph)PPHWR ddPTM_KYSE-520_SHP099_60min_R1 9 FRRSETPPHWR 11 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 FRRS(1)ET(1)PPHWR;FRRS(1)ET(1)PPHWR;FRRS(1)ET(1)PPHWR;FRRS(1)ET(1)PPHWR;FRRS(1)ET(1)PPHWR;FRRS(1)ET(1)PPHWR;FRRS(1)ET(1)PPHWR;FRRS(1)ET(1)PPHWR;FRRS(1)ET(1)PPHWR 105.46 0.0034304 19228530000.0 2628540.0 2632980.0 2926290.0 2105620.0 2179930.0 2210450.0 1873020.0 1936930.0 3230230.0 1682242.0 True False 2482729.646335421 2506487.6886164476 3114923.335629546 2305737.491722263 2351478.08889497 2196653.7616252047 2062363.140513627 1930211.2419128602 2643701.6594717065 1667338.6446444704 1.489037427585575 1.5032865079132802 1.8682007675133967 1.3828849341004266 1.410318231660959 1.3174610740780863 1.2369191748406865 1.157659991935497 1.5855817100883112 1.0 20.669115721837635 -5.73140899928714 1.8749448730797342 1.2737884649313853 1.6040611892713532 0.4139012990542752 0.17533873872986913 0.34011666311606653 2.464886815570022 0.05914561301626498 0.07946266352006194 1.8560556808162307e-06 5.73140899928714 0.3302727243399679 FRT(ph)PSFLK ddPTM_KYSE-520_SHP099_60min_R1 1 FRTPSFLK 8 1 P35612;P35611;P35611-3;Q9UEY8-2;Q9UEY8 P35612;P35611;Q9UEY8-2 ADD2;ADD1;ADD3 Beta-adducin;Alpha-adducin;Gamma-adducin 1 FRT(0.96)PS(0.04)FLK 106.62 0.0051311 800250000.0 691440.0 700570.0 566450.0 547670.0 568890.0 600780.0 577580.0 634810.0 658080.0 589400.0 True False 653084.4448485328 666913.5656229922 602964.2733520457 599720.3921370101 613658.4064586742 597030.3091719737 635967.4230375863 632607.9922757678 538589.2608467944 584178.3745462616 1.117953819081015 1.1416265898938693 1.0321578127919837 1.0266049177236665 1.050464093155297 1.022000017778293 1.0886527998088766 1.0829021063423 0.9219602852726672 1.0 19.15604942707099 -1.000000000002012 0.3474528233396941 1.0170439784420124 2.4214472584891054 0.3845050610196631 0.0471434422272021 69.00660444027356 0.9744322552877033 0.04092912789801461 63.32685095173512 0.09999999999953674 1.000000000002012 1.404403280047093 FRTPS(ph)FLK ddPTM_KYSE-520_SHP099_60min_R1 3 FRTPSFLK 8 1 P35612;P35611;P35611-3;Q9UEY8-2;Q9UEY8 P35612;P35611;Q9UEY8-2 ADD2;ADD1;ADD3 Beta-adducin;Alpha-adducin;Gamma-adducin 1 FRTPS(1)FLK;FRT(0.018)PS(0.982)FLK;FRT(0.154)PS(0.846)FLK 100.09 0.0017715 9205400000.0 2313600.0 2208480.0 2154560.0 2337000.0 2526440.0 2205880.0 2285500.0 2422800.0 2550060.0 2202930.0 True False 2185259.9959527454 2102381.3058039355 2293446.3850178868 2559107.7773553315 2725256.4545227657 2192112.284690363 2516540.6443304876 2414395.8722857707 2087033.3857813303 2183413.7540536057 1.0008455758308346 0.9628872685723309 1.050394768632377 1.1720672605474949 1.248163088403746 1.0039839130905024 1.1525715818444473 1.1057894399553618 0.9558579458000844 1.0 21.058154114384827 -4.962879102900363 5.059269397222684 1.101919334834774 0.9846906176960489 0.20164417805179846 0.08427443299401072 0.26710157666726153 16.72616969380724 0.022666470045107134 0.04779374728752468 1.0892332673802133e-05 4.962879102900363 -0.11722871713872507 FRTPS(ph)FLKK ddPTM_KYSE-520_SHP099_60min_R1 2 FRTPSFLKK 9 2 P35612;P35611;P35611-3;Q9UEY8-2;Q9UEY8 P35612;P35611;Q9UEY8-2 ADD2;ADD1;ADD3 Beta-adducin;Alpha-adducin;Gamma-adducin 1 FRT(0.146)PS(0.854)FLKK;FRT(0.316)PS(0.684)FLKK 68.171 0.01941 22154520000.0 2120210.0 2281850.0 1893670.0 2241540.0 2113090.0 1880110.0 1783820.0 2027630.0 2380420.0 1643890.0 True False 2002597.7247661485 2172226.5008733193 2015738.998179127 2454575.2876564227 2279378.1611625478 1868375.5360986055 1964145.934005518 2020596.6247823976 1948195.7335049352 1629326.4135270668 1.2290954765970108 1.3332052330576385 1.2371609405236228 1.5064969592820308 1.3989696246489298 1.14671653303285 1.205495668454582 1.2401423115754522 1.1957062239527556 1.0 20.635844226596372 -6.266878190975334 24.948935249172813 1.1756137566070226 1.3439804363574361 0.47438954648757636 0.09554910472246626 443.6956979167613 2035317.2211029807 0.033826872106765486 0.030668206183167148 5.409060126344014e-07 6.266878190975334 0.16836667975041353 FRYS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 7 FRYSGR 6 1 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3;H0Y5B0;H0YKW6;H0Y5N1;A0A087WVP2;B5MC67;A0A0A0MSA4;A0A0A0MRA8;A8K968;A0A1B0GTF8;Q7Z6J6;Q9Y2J2-3;Q7Z6J6-2;Q9Y2J2-4;Q9Y2J2-2;J3KT37;Q9Y2J2;A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0;Q9H4G0-4;P11171;P11171-2;P11171-5;P11171-7;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y570;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8YCW8;A0A3B3IUD6;A0A2R8Y7Y3;A0A2R8YD30;Q4VB86;A0A2R8Y7N0;A0A2R8Y420;A0A2R8Y6D0;A0A3B3ITP0;A0A1B0GWG0;A0A2R8Y4N6;P11171-4;P11171-3;P11171-6 O43491;A0A0C4DH22;P11171 EPB41L2;FRMD5;EPB41L3;EPB41L1;EPB41 Band 4.1-like protein 2;FERM domain-containing protein 5;Band 4.1-like protein 3;Band 4.1-like protein 3, N-terminally processed;Band 4.1-like protein 1;Protein 4.1 1 FRYS(1)GR;FRYS(1)GR;FRYS(1)GR;FRYS(1)GR;FRYS(1)GR;FRYS(1)GR;FRYS(1)GR 98.009 0.0084077 32067420000.0 5662590.0 5682470.0 5218700.0 5343640.0 5437330.0 4669920.0 5013040.0 5488410.0 5898010.0 5375420.0 True False 5348474.844606695 5409475.611638639 5555105.752215227 5851497.938976056 5865216.936824256 4640773.297061127 5519807.0057556415 5469371.986714519 4827080.060732737 5327797.960813479 1.003880943674159 1.0153304707546924 1.0426644916105343 1.0982957653451664 1.1008707499727939 0.8710490396209669 1.0360391002726472 1.0265727092022505 0.9060178513217703 1.0 22.345107943313845 -6.231919102937593 24.999620177993986 0.9738529452531737 1.052189883308649 0.363525841287073 0.055478913121974636 883.547267208376 748243.9545541232 0.018776675520235497 0.01877429142726324 5.862473560284251e-07 6.231919102937593 0.07833693805547526 FS(ph)CDIEQLK ddPTM_KYSE-520_SHP099_60min_R1 2 FSCDIEQLK 9 0 B8ZZZ7;Q9NUQ6-2;Q9NUQ6;Q9NUQ6-4;Q9NUQ6-3 B8ZZZ7 SPATS2L SPATS2-like protein 1 FS(1)CDIEQLK;FS(1)CDIEQLK 129.0 0.00059975 513300000.0 1334010.0 1205810.0 1173920.0 1063520.0 1322770.0 1096050.0 1223820.0 1365340.0 1456120.0 1400400.0 True False 1260009.8060169942 1147881.0776422918 1249592.7615384094 1164596.6210410537 1426864.4734682292 1089209.1453908957 1347535.668932199 1360603.9542127512 1191725.3137980695 1387993.545494713 0.9077922661145356 0.8270075040105179 0.900287155941367 0.8390504587151841 1.0280051215653614 0.7847364628793547 0.9708515383995581 0.9802667733067885 0.85859571729731 1.0 20.404569428375492 -13.999998065527556 0.05424117855451739 1.3999808035659318 0.7159136719703644 0.17149333312127935 0.07110152188853036 789.5661383692268 3.144598574523459 43.627579904247355 8.593386418403975 1.0000044542973318e-14 13.999998065527556 -0.6840671315955674 FS(ph)DDAAEPNNDAEALVNGFEHGGLAK ddPTM_KYSE-520_SHP099_60min_R1 1 FSDDAAEPNNDAEALVNGFEHGGLAK 26 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 FS(1)DDAAEPNNDAEALVNGFEHGGLAK 104.91 0.0010955 22619000.0 35425.0 33567.0 22782.0 17005.0 31468.0 26571.0 26862.0 32777.0 39914.0 28832.0 True False 33459.90463201328 31954.39093490578 24250.564172488816 18621.150087260332 33944.35257157198 26405.16053298801 29577.47310785631 32663.3042372093 32666.62375005921 28576.570910956558 1.1708859238665474 1.1182024265428616 0.8486170103492331 0.6516229727241623 1.1878385505854154 0.9240143128181973 1.0350252729768916 1.1430099272227883 1.1431260892654718 1.0 14.802545187985801 -7.022661714398189 5.325001980234521 1.1052479138063644 0.9775306475758204 0.09271331704837804 0.15527307322302253 0.44067657970767754 36.92242533922512 0.07624957261458618 0.045802767925669195 9.491575040006677e-08 7.022661714398189 -0.12771726623054402 FS(ph)DFLGLHSK ddPTM_KYSE-520_SHP099_60min_R1 2 FSDFLGLHSK 10 0 O60749;D6RC15;O60749-2 O60749 SNX2 Sorting nexin-2 1 FS(1)DFLGLHSK;FS(1)DFLGLHSK 176.51 1.6988e-05 138970000.0 250240.0 226890.0 186904.0 179068.0 204245.0 206692.0 193282.0 199120.0 234978.0 199449.0 True False 236358.68835892715 215989.86383116693 198952.13089697328 196086.56888124245 220317.91950491688 205401.95855949572 212820.83081053832 198429.29919495725 192311.9185133389 197682.03702897386 1.1956508133527808 1.0926124956892755 1.0064249331253767 0.991929119247706 1.114506521766696 1.0390522156011088 1.0765815347165084 1.0037801217410252 0.9728345650604163 1.0 17.592822256649054 -4.3925911408354255 2.7464880135848286 1.0302946223650815 1.2055076385388839 0.6224250451954442 0.04070143378727513 0.23573319476246535 2.79838729032396 0.011074232675397101 0.08009592999934462 4.049569521432627e-05 4.3925911408354255 0.17521301617380236 FS(ph)EFS(ph)SWIST(ph)NET(ph)QLKGIK ddPTM_KYSE-520_SHP099_60min_R1 1 FSEFSSWISTNETQLKGIK 19 1 A0A5F9ZHI3;A0A5F9ZHR3;F5GXQ8;A0A5F9ZI52;E7ENN3;A0A0C4DG40;Q8NF91-5;Q8NF91-6;Q8NF91-10;Q8NF91-7;Q8NF91-4;Q8NF91 A0A5F9ZHI3 SYNE1 Nesprin-1 4 FS(0.969)EFS(0.819)S(0.122)WIS(0.199)T(0.906)NET(0.985)QLKGIK 42.277 0.068094 0.0 8772.8 10296.0 8810.7 14850.0 9947.3 10747.0 10737.0 10663.0 12093.0 11517.0 True False 8286.155295856772 9801.364705388922 9378.651819618435 16261.33953518469 10730.095917605127 10679.923986602766 11822.400743021859 10626.012541762908 9897.216039722047 11414.968340090412 0.7259026086612117 0.8586414270607858 0.8216099721170275 1.4245628240661325 0.9400022494955198 0.935606973967146 1.0356928193572388 0.9308841010485662 0.8670384134980138 1.0 13.478639237740369 -5.042196325578773 24.999730144298685 1.0188354251945984 0.8042344384717738 0.31253571748268505 0.1477393231438366 582.141875078425 344896.4931323481 0.04086649923239168 0.07079131274305847 9.0741023688673e-06 5.042196325578773 -0.21460098672282457 FS(ph)ESESRSPLEDETDNTWMFK ddPTM_KYSE-520_SHP099_60min_R1 1 FSESESRSPLEDETDNTWMFK 21 1 A0A1B0GVJ7;Q9BY89-2;Q9BY89 A0A1B0GVJ7;Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 FS(0.307)ES(0.271)ES(0.211)RS(0.211)PLEDETDNTWMFK 86.551 0.00017205 0.0 34555.0 30412.0 21405.0 20749.0 24806.0 35876.0 19054.0 27223.0 28754.0 33972.0 True False 32638.165266315274 28950.961870657342 22784.800549210926 22720.97872158569 26758.09107316686 35652.08457647352 20980.164269119745 27128.569766895955 23532.99842935317 33671.03450981606 0.9693246952896658 0.8598180095184577 0.6766884617865991 0.6747930098483276 0.7946916827092472 1.0588354380997687 0.6230923574089603 0.8056945728527352 0.6989092783143516 1.0 15.039220426799167 -10.160195798568084 4.480907929403753 1.0000341919723394 0.7935045896987866 0.17933668127764546 0.13099148520480364 181015522.56654552 5.039904401308576 66545.72707370533 0.0321943303545493 6.915191341625039e-11 10.160195798568084 -0.20652960227355288 FS(ph)GGFGAR ddPTM_KYSE-520_SHP099_60min_R1 12 FSGGFGAR 8 0 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;A0A2R8Y7T2;O15523-2;O15523;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A0D9SG12;A0A2R8Y5G6 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 1 FS(1)GGFGAR;FS(1)GGFGAR;FS(1)GGFGAR;FS(1)GGFGAR;FS(1)GGFGAR;FS(1)GGFGAR;FS(1)GGFGAR;FS(1)GGFGAR;FS(1)GGFGAR;FS(1)GGFGAR;FS(1)GGFGAR;FS(1)GGFGAR 134.51 0.00074353 16588330000.0 13975300.0 13310410.0 12531720.0 12038770.0 13309050.0 12456250.0 12675860.0 13498170.0 15256110.0 14289650.0 True False 13200062.249930127 12670957.924267264 13339534.722660953 13182931.081211803 14356396.516864104 12378505.923338683 13957259.633271959 13451347.998766553 12485984.999236252 14163054.81817947 0.932006718846187 0.8946486536225946 0.9418543452602147 0.9307971514937868 1.0136511297291926 0.8739997184399676 0.9854695764755951 0.9497490598921229 0.881588411506354 1.0 23.75562913695692 FS(ph)LCSDNLEGISEGPSNR ddPTM_KYSE-520_SHP099_60min_R1 1 FSLCSDNLEGISEGPSNR 18 0 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;H0Y7I9;C9IZ08;B4DGD8;A0A0A0MQV8 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 FS(0.992)LCS(0.008)DNLEGISEGPSNR 245.78 8.9627e-24 585700000.0 111580.0 116190.0 99877.0 107080.0 111380.0 113460.0 117040.0 127240.0 132600.0 126280.0 True False 105390.43497078448 110608.05799525435 106315.2312288503 117256.85100522394 120144.97233448853 112751.85405415004 128871.54540032399 126798.63413803939 108523.1825739802 125161.2574443532 0.8420372016287959 0.883724406847149 0.8494260396522313 0.9368462206234739 0.9599214228724497 0.9008526788273887 1.029644061043573 1.0130821368138951 0.8670668926622896 1.0 16.93342853237261 -5.3899508393587965 3.125330561270658 0.9624472718821488 0.8602582833542743 0.485733887796602 0.047473716471110664 0.23008412187365798 4.246153303348664 0.014120382849748585 0.022208831828603955 4.0742639446008206e-06 5.3899508393587965 -0.1021889885278745 FS(ph)LS(ph)PSLGPQASR ddPTM_KYSE-520_SHP099_60min_R1 1 FSLSPSLGPQASR 13 0 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 2 FS(1)LS(0.695)PS(0.305)LGPQASR 147.51 8.198099999999999e-06 81329000.0 205480.0 182760.0 170630.0 183670.0 188100.0 172860.0 175220.0 168040.0 208940.0 174170.0 True False 194081.61478577548 173979.93527164738 181629.08281765296 201125.94157760098 202902.399857401 171781.1166208388 192932.94758240576 167457.10846083082 171001.76294877398 172626.98930220972 1.1242831469765495 1.0078373953858926 1.0521476598290416 1.1650897834144551 1.1753805165552043 0.9950999974871246 1.1176291051722358 0.9700517233007624 0.9905853287483886 1.0 17.397298514205563 -7.266059137698789 24.979327683278864 0.9852388875110696 1.0887676224963319 0.4113047266416784 0.05706371703486139 425.14292731045447 2298756.2518764986 0.031347374852553414 0.015859397405293088 5.419270913907363e-08 7.266059137698789 0.10352873498526227 FS(ph)PDDKYSR ddPTM_KYSE-520_SHP099_60min_R1 2 FSPDDKYSR 9 1 Q9NPE3 Q9NPE3 NOP10 H/ACA ribonucleoprotein complex subunit 3 1 FS(0.917)PDDKYS(0.083)R;FS(0.542)PDDKYS(0.458)R 110.54 0.0016993 0.0 1112010.0 967430.0 899280.0 878110.0 878560.0 940400.0 943020.0 954240.0 1022000.0 932260.0 True False 1050324.588563022 920953.2106579648 957249.0276988745 961565.310386602 947697.6736773945 934530.6147763316 1038349.6645882919 950929.9641612915 836430.5625234387 924000.9016873047 1.1367138134227353 0.996701636303845 1.0359827852449666 1.0406540822965664 1.0256458321055937 1.011395782265795 1.123753951638117 1.0291439785662677 0.9052269981512409 1.0 19.817534733934387 -7.616175552240172 6.86264572224243 0.9543138339261138 1.049042592031732 0.40582228784343033 0.04768381830665666 0.21261381112083338 13.118666301469455 0.03158422666679081 0.011674815911048898 2.4200506065281826e-08 7.616175552240172 0.0947287581056181 FS(ph)PDSQYIDNR ddPTM_KYSE-520_SHP099_60min_R1 2 FSPDSQYIDNR 11 0 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10;F5GZI3 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 FS(0.978)PDS(0.022)QYIDNR;FS(1)PDSQYIDNR 137.09 0.00040881 518320000.0 1688660.0 1479290.0 1525840.0 1383380.0 1536370.0 1474140.0 1424580.0 1470080.0 1774620.0 1590790.0 True False 1594986.6635397475 1408222.6879404427 1624198.0878303207 1514856.0192716357 1657273.5782504769 1464939.3454555327 1568590.4489609837 1464980.6355992497 1452393.742529689 1576696.8382158922 1.011600090062051 0.8931474039955036 1.0301270659413375 0.9607782438288947 1.0511047768230202 0.9291192256801767 0.9948586252864683 0.9291454134308694 0.921162335920672 1.0 20.588473859732993 -9.375500766035605 6.734314400044554 0.9999999996424479 0.9691591264878515 0.03441935118496764 0.04924417003435248 0.0 0.0 0.0455996750838827 0.011059545697923192 4.2121054379606947e-10 9.375500766035605 -0.030840873154596382 FS(ph)PGAPGGSGSQPNQK ddPTM_KYSE-520_SHP099_60min_R1 12 FSPGAPGGSGSQPNQK 16 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK;FS(1)PGAPGGSGSQPNQK 347.03 1.5244999999999998e-60 17947950000.0 11008104.0 10364132.0 8769646.0 8699383.0 8916414.0 10161111.0 10386556.0 11423514.0 11298286.0 10679792.0 True False 10397462.527008718 9866223.54184071 9334951.413089722 9526169.744755134 9618085.054344108 10097691.737176258 11436530.443498028 11383888.4962022 9246802.069012405 10585177.351632437 0.9822662560684664 0.9320791909376133 0.8818889946751902 0.8999537209724706 0.9086371191372449 0.9539463914243251 1.0804287980809595 1.0754556223327318 0.8735613737814578 1.0 23.335542105704146 -6.533303065349127 23.322190431685648 1.0141549289306226 0.9195490537948576 0.32482455624924755 0.05841976527181404 106.48283790622035 238227.36915362775 0.022486526960121142 0.01744275834029312 2.928848682476611e-07 6.533303065349127 -0.09460587513576502 FS(ph)PPPVGGQGK ddPTM_KYSE-520_SHP099_60min_R1 3 FSPPPVGGQGK 11 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 FS(1)PPPVGGQGK;FS(1)PPPVGGQGK;FS(1)PPPVGGQGK 87.573 0.0033339 1753100000.0 2259150.0 1899970.0 1858590.0 1890610.0 2105890.0 2139860.0 2038530.0 2315410.0 2373170.0 2169670.0 True False 2133830.4459961285 1808692.5892868883 1978397.6852491458 2070293.0059673782 2271611.562124946 2126504.339999234 2244604.506535566 2307378.3831307567 1942262.1507473055 2150448.411777718 0.9922723253017486 0.8410769490590526 0.9199930927957753 0.9627261898628493 1.0563432025077346 0.9888655446708948 1.043784400612527 1.0729754643234193 0.9031893720908606 1.0 21.036206091462272 -5.464317849469719 3.3474442160291615 1.015043739119934 0.9108040577050136 0.35447294098366844 0.0557998616312221 0.23966634174930462 5.3076950881585905 0.015987909652929372 0.023874570971798483 3.4330659826141707e-06 5.464317849469719 -0.10423968141492046 FS(ph)PPRHELS(ph)PPQKR ddPTM_KYSE-520_SHP099_60min_R1 2 FSPPRHELSPPQKR 14 2 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 2 FS(1)PPRHELS(1)PPQKR;FS(1)PPRHELS(1)PPQKR 57.482 0.028756999999999998 2624500000.0 1142640.0 1069980.0 1001200.0 1029460.0 971620.0 965540.0 875190.0 962140.0 1219220.0 913030.0 True False 1079255.4814036314 1018576.5547272766 1065738.95397664 1127299.5688815643 1048080.9662384242 959513.7067111216 963662.7462312854 958802.5609051649 997840.3820350535 904941.264526592 1.1926248959021992 1.125572006333617 1.1776885370943575 1.2457157310328821 1.1581756820280638 1.0603049549443173 1.0648898265628464 1.0595191074713006 1.1026576211629164 1.0 19.7874646311342 -6.203921641285936 4.217145943876838 1.061171511844147 1.1825156368267191 0.7444427306893745 0.03604445504039008 0.12182397272744971 4.490309008403372 0.012569532392817396 0.0123319978898944 6.25285501365135e-07 6.203921641285936 0.12134412498257219 FS(ph)PTMGR ddPTM_KYSE-520_SHP099_60min_R1 12 FSPTMGR 7 0 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FS(0.95)PT(0.05)MGR;FS(0.958)PT(0.042)MGR;FS(0.999)PT(0.001)MGR;FS(0.993)PT(0.007)MGR;FS(0.993)PT(0.007)MGR;FS(0.999)PT(0.001)MGR;FS(0.984)PT(0.016)MGR;FS(0.867)PT(0.133)MGR;FS(0.998)PT(0.002)MGR;FS(0.894)PT(0.106)MGR;FS(0.994)PT(0.006)MGR;FS(0.994)PT(0.006)MGR 176.6 8.8933e-06 38913050000.0 15782390.0 13550110.0 11995210.0 12486240.0 13724450.0 12784550.0 12198190.0 12262660.0 12666590.0 11966410.0 True False 14906909.365285553 12899142.376470229 12768440.429614585 13672928.495475069 14804486.13356142 12704756.881261958 13431302.088062009 12220123.694586365 10366656.554749265 11860396.917126104 1.2568642912582768 1.0875810031150142 1.0765609716802387 1.1528221686857474 1.248228557358323 1.0711915435913126 1.1324496289552972 1.0303300791679935 0.8740564609418833 1.0 23.49964895578075 -7.423904513361208 2.720508044854743 0.9372595414639011 1.1441564416405243 0.6107591828544423 0.06759093426381506 0.1913614515259844 2.667331565816524 0.04873199049226968 0.018496445943134546 3.767866324890205e-08 7.423904513361208 0.2068969001766232 FS(ph)PVLGR ddPTM_KYSE-520_SHP099_60min_R1 11 FSPVLGR 7 0 F8VZ44;Q9NRG9-2;Q9NRG9 F8VZ44 AAAS Aladin 1 FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR;FS(1)PVLGR 182.73 0.00014345 54837560000.0 19212650.0 17754950.0 16969970.0 16123090.0 17089510.0 16650110.0 16150430.0 16190710.0 19876800.0 15529550.0 True False 18146886.005031776 16901975.551276714 18063881.419112034 17655423.62601622 18434357.210989106 16546190.487445306 17783073.077407356 16134548.20595013 16267674.173352117 15391970.268807076 1.178983956446936 1.0981034432953507 1.1735912364461734 1.1470541664049463 1.19766065611156 1.0749884646657186 1.155347416012492 1.048244501787269 1.0568935548374672 1.0 23.87567458171916 -7.484684579667656 0.8990378764635505 1.002701099410081 1.1528490128519755 0.6707231376060495 0.036256806255982696 0.31823463391906504 0.4868072635665515 0.031804463989953624 0.012378510664935668 3.2757852293891045e-08 7.484684579667656 0.1501479134418946 FS(ph)PVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 FSPVTPK 7 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 2 FS(1)PVT(1)PK;FS(1)PVT(1)PK;FS(1)PVT(1)PK;FS(1)PVT(1)PK 118.91 0.0059996 3059780000.0 15640700.0 14010400.0 12855700.0 13777400.0 13582900.0 12813800.0 13894500.0 14264400.0 15502200.0 13423500.0 True False 14773079.192037545 13337319.353960875 13684398.991847256 15086799.95367366 14651796.95387076 12733824.32116223 15299091.657252222 14214920.125735998 12687391.258660302 13304578.233324958 1.1103756115345562 1.0024608912858213 1.0285481247027384 1.1339555218582307 1.1012597841825098 0.9571009390787661 1.1499118114794094 1.0684232056399081 0.9536109327300024 1.0 23.665419440611874 -7.752641962212441 24.875983659193 0.9768054664100969 1.0676448367522906 0.29042176985105983 0.05761499867136661 201.34551278266787 569345.9421937311 0.04004280577514116 0.014627999107093934 1.7674943646061926e-08 7.752641962212441 0.09083937034219369 FS(ph)PVTPK ddPTM_KYSE-520_SHP099_60min_R1 10 FSPVTPK 7 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FS(0.999)PVT(0.001)PK;FS(0.94)PVT(0.06)PK;FS(1)PVTPK;FS(1)PVTPK;FS(1)PVTPK;FS(0.998)PVT(0.002)PK;FS(1)PVTPK;FS(1)PVTPK;FS(1)PVTPK;FS(1)PVTPK 165.15 0.0008212 69630850000.0 179055100.0 158557400.0 141968400.0 148456100.0 159243400.0 152305000.0 151522200.0 160288300.0 176256200.0 160139800.0 True False 169122556.66550738 150940064.50449058 151119910.22147152 162565323.10904613 171774949.60899535 151354408.00032887 166839542.69016555 159732297.29887053 144252517.1372246 158721085.95887932 1.0655330112176955 0.9509767627446513 0.9521098555274686 1.0242200784284121 1.0822440419384352 0.9535872759813464 1.0511492010166155 1.0063709955982356 0.9088428060188352 1.0 27.24191856079148 FS(ph)SLGR ddPTM_KYSE-520_SHP099_60min_R1 1 FSSLGR 6 0 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 FS(0.859)S(0.141)LGR 116.54 0.0084744 871160000.0 1468800.0 1583900.0 1682900.0 1510000.0 1487700.0 1367900.0 1384100.0 1328700.0 1645400.0 1553300.0 True False 1387322.7360197913 1507807.0665176294 1791382.426735204 1653509.9460019446 1604773.5261448983 1359362.4287032583 1524018.3355142546 1324091.0498209118 1346636.8371585757 1539538.970449112 0.9011286902436018 0.9793886971745667 1.163583683895072 1.0740292891186674 1.042372786235321 0.8829672095320246 0.989918647573871 0.8600568580830728 0.8747013638542303 1.0 20.554066956201602 -6.252252995096431 24.21562769893593 0.9170567344524526 1.0388061828797321 0.3438672661276835 0.07596173242732236 493.77269514157086 1301601.9474282248 0.02662762060317927 0.026253276233209277 5.594316137296399e-07 6.252252995096431 0.12174944842727953 FS(ph)TPPAILR ddPTM_KYSE-520_SHP099_60min_R1 1 FSTPPAILR 9 0 P10243;P10243-2 P10243 MYBL1 Myb-related protein A 1 FS(0.924)T(0.076)PPAILR 94.69200000000001 0.0050576 0.0 317230.0 371380.0 261240.0 239860.0 222880.0 306020.0 239820.0 281240.0 321230.0 341050.0 True False 299632.6195176731 353538.3473472554 278079.9483987791 262656.2222834612 240419.3879862709 304110.0156676448 264063.34601764986 280264.4440819094 262902.7295493189 338028.5623328846 0.8864121346722179 1.0458830606127805 0.822652223467823 0.777023753468507 0.711239861883358 0.8996577495370424 0.7811864896718548 0.8291146823442389 0.777753003281471 1.0 18.366785629213624 -4.826897871472827 9.301705267277503 0.8137923131237447 0.965816849281664 0.3090608978529996 0.08324120353130587 0.2968596053554321 39.33087134670865 0.020351338578448612 0.04258783503443439 1.4897113564864028e-05 4.826897871472827 0.15202453615791933 FS(ph)TYTSDKDENK ddPTM_KYSE-520_SHP099_60min_R1 1 FSTYTSDKDENK 12 1 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 FS(0.302)T(0.244)YT(0.257)S(0.197)DKDENK 103.21 0.00067184 1511000000.0 882820.0 735970.0 745810.0 718260.0 669900.0 730810.0 828860.0 849800.0 864710.0 773050.0 True False 833848.214741961 700612.8964865082 793886.105938191 786523.2144472561 722617.3187903933 726248.743709794 912649.257694058 846852.2421448119 707700.4615652065 766201.3784237988 1.0882885860337692 0.9143978544227931 1.036132442845958 1.026522839289669 0.9431167042232879 0.9478562218248759 1.191134972337855 1.1052606612205855 0.9236481184895043 1.0 19.547364095661134 FSACS(ph)LQEEK ddPTM_KYSE-520_SHP099_60min_R1 2 FSACSLQEEK 10 0 Q9BYI3-2;Q9BYI3 Q9BYI3-2 FAM126A Hyccin 1 FSACS(1)LQEEK;FSACS(1)LQEEK 150.56 0.00015298 473780000.0 664280.0 791670.0 629710.0 580730.0 708230.0 624900.0 618650.0 775250.0 852870.0 740890.0 True False 627431.0641906502 753636.9848791038 670302.1141716233 635922.4045971596 763963.671722526 620999.767305114 681189.179442161 772560.8386947098 698010.3071030955 734326.2910036983 0.8544308870285162 1.0262971571520492 0.9128123592789182 0.8659943302969074 1.0403599613440484 0.8456727954766724 0.9276382825829266 1.0520675184307393 0.9505451672566904 1.0 19.486061727986673 -7.226098141904596 21.2091947023433 1.0009797025381162 0.9273365980904924 0.2172476351027075 0.06609098335342825 145.3838568342593 87248.41116561323 0.029777163593230023 0.0171888329978341 5.941578755953658e-08 7.226098141904596 -0.07364310444762379 FSAS(ph)SGGGGSR ddPTM_KYSE-520_SHP099_60min_R1 2 FSASSGGGGSR 11 0 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5;H0YEC5;H0YD77;H0YD99;H0YEN8;H0YDC0;H0YCF8 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FS(0.068)AS(0.466)S(0.466)GGGGSR;FS(0.014)AS(0.493)S(0.493)GGGGSR 103.44 0.0026149000000000003 2020750000.0 4791100.0 4774500.0 4214700.0 3797700.0 4275400.0 4044700.0 3925400.0 4081600.0 4898400.0 4252700.0 True False 4525328.132178937 4545125.853329389 4486386.3057584325 4158632.2661798554 4611849.656301603 4019455.526994717 4322217.740212168 4067441.8822525996 4008974.038615272 4215024.386550539 1.0736184935533295 1.0783154346229054 1.0643796795277782 0.986621163912925 1.0941454267779016 0.9536019624987578 1.0254312534949181 0.9649865598004957 0.9511152655266384 1.0 22.0071095474082 -5.8840626009667005 0.6134655931727203 0.9703482764871812 1.083008192010707 0.5014406437738204 0.0370010004151345 0.7350603518646174 0.5965996807567758 0.025932338789003122 0.043450326003191604 1.305982624935302e-06 5.8840626009667005 0.11265991552352583 FSASS(ph)GGGGSR ddPTM_KYSE-520_SHP099_60min_R1 1 FSASSGGGGSR 11 0 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5;H0YEC5;H0YD77;H0YD99;H0YEN8;H0YDC0;H0YCF8 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 FSAS(0.088)S(0.912)GGGGSR 138.01 0.00010427 1936800000.0 3325300.0 2999500.0 2768600.0 2305700.0 2728000.0 2417300.0 2602100.0 2684800.0 3308700.0 2716900.0 True False 3140838.9801787934 2855399.5176587137 2947068.3859166224 2524833.034766015 2942678.079803238 2402212.7340480946 2865145.66204873 2675487.05543703 2707923.485539434 2692830.3797162124 1.1663708950393656 1.060371102155953 1.0944129300216834 0.9376130980192292 1.0927825614153077 0.8920772552711824 1.0639903959902135 0.9935594442153426 1.0056049225888533 1.0 21.360691927255406 -4.034245635063466 0.8349685876343744 0.9990038737788296 1.3097011842182749 0.43545422405505396 0.05778262033692262 3.0153203143665657 1.2664216451334382 0.01950841814092304 0.9420894578367701 9.24175316563794e-05 4.034245635063466 0.31069731043944526 FSCPPNFTAKPPASES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 FSCPPNFTAKPPASESPR 18 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 FSCPPNFTAKPPASES(1)PR;FSCPPNFTAKPPASES(1)PR 194.33 8.690000000000001e-13 2106000000.0 1191310.0 1061050.0 1045650.0 822850.0 1002860.0 999080.0 962220.0 1023810.0 1213840.0 1012090.0 True False 1125225.659482393 1010075.5653314797 1113054.2720991555 901053.4166011271 1081779.3765071412 992844.3711300913 1059490.5879622337 1020258.6420690515 993437.2544162916 1003123.6699941041 1.1217217708450709 1.006930247531111 1.1095882844691498 0.8982475875645753 1.0784107771213287 0.9897527102873834 1.0561913945949066 1.0170816147475097 0.9903437473687872 1.0 19.936068048742484 -1.0238637391329979 1.050118978012347 1.0142864662386866 138.7203856035727 0.24683847554178096 0.054768299157848345 2813.9556385850947 3.0697240260961425 0.01573257982615129 933562.2912837918 0.09465340919746863 1.0238637391329979 137.70609913733404 FSDSTSKT(ph)PPQEELPTR ddPTM_KYSE-520_SHP099_60min_R1 5 FSDSTSKTPPQEELPTR 17 1 I6L8A6;Q99708-3;Q99708;Q99708-2;F6Q6H0 I6L8A6 RBBP8 DNA endonuclease RBBP8 1 FSDS(0.052)T(0.043)S(0.043)KT(0.862)PPQEELPTR;FS(0.001)DS(0.094)T(0.094)S(0.094)KT(0.716)PPQEELPTR;FSDST(0.001)S(0.026)KT(0.973)PPQEELPTR;FSDS(0.001)T(0.034)S(0.2)KT(0.764)PPQEELPTR;FS(0.006)DS(0.272)T(0.234)S(0.201)KT(0.287)PPQEELPTR 191.65 6.7627e-12 3872290000.0 3859240.0 4218870.0 3075320.0 2726660.0 2863650.0 3909060.0 2854580.0 3754250.0 4541530.0 3844970.0 True False 3645160.263995791 4016189.15254703 3273560.047885974 2985800.946599775 3089002.9630603157 3884662.106547818 3143148.804416074 3741227.3829985415 3716902.63465467 3810906.5571413985 0.9565073846182323 1.0538671290748247 0.8589977210938244 0.7834883647316339 0.8105690645370769 1.0193538068437302 0.8247771907516366 0.981715853407037 0.9753329237867113 1.0 21.86170280324139 -7.4067842870388185 12.40720014809271 0.9846183104320018 0.9018887726873479 0.17605936603624706 0.08387214146949873 1.2896989696461418 130.013853981008 0.04934191659906234 0.02368794616655811 3.9193650262972245e-08 7.4067842870388185 -0.08272953774465386 FSEGVLQS(ph)PSQDQEK ddPTM_KYSE-520_SHP099_60min_R1 4 FSEGVLQSPSQDQEK 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 FSEGVLQS(0.977)PS(0.023)QDQEK;FSEGVLQS(0.987)PS(0.013)QDQEK;FSEGVLQS(0.953)PS(0.047)QDQEK;FSEGVLQS(1)PSQDQEK 366.63 1.2462999999999996e-67 2822700000.0 4840390.0 4946200.0 3496520.0 3195590.0 3597930.0 4996000.0 3601190.0 4445900.0 5031430.0 4498280.0 True False 4571883.917621761 4708577.127602438 3721911.2738298057 3499297.912810833 3881066.621578615 4964818.110827897 3965233.4294274803 4430478.210580864 4117849.1440286725 4458428.738808889 1.0254473460179565 1.0561068491722443 0.8348033560415612 0.7848724557041374 0.870500987891864 1.1135802323386006 0.8893791202518647 0.9937308567960891 0.9236099498875908 1.0 22.088103927422953 FSEGVLQSPS(ph)QDQEK ddPTM_KYSE-520_SHP099_60min_R1 3 FSEGVLQSPSQDQEK 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 FSEGVLQS(0.048)PS(0.952)QDQEK;FSEGVLQS(0.342)PS(0.658)QDQEK;FSEGVLQS(0.297)PS(0.703)QDQEK 263.2 2.6535999999999998e-27 968980000.0 2319780.0 2210510.0 1661400.0 1434620.0 1668420.0 2319940.0 1669060.0 2020110.0 2460330.0 2105530.0 True False 2191097.1790332193 2104313.781556845 1768496.5023339884 1570965.8534657683 1799715.161988753 2305460.3939219494 1837784.8732558521 2013102.7099072183 2013596.091872101 2086876.6422775546 1.0499409187128192 1.008355615720659 0.8474370101741636 0.752783284665673 0.8623965238427307 1.1047420567254225 0.88063895873124 0.9646486376454808 0.9648850588861461 1.0 20.992913892948774 FSESES(ph)RSPLEDETDNTWMFK ddPTM_KYSE-520_SHP099_60min_R1 1 FSESESRSPLEDETDNTWMFK 21 1 A0A1B0GVJ7;Q9BY89-2;Q9BY89 A0A1B0GVJ7;Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 FSES(0.009)ES(0.621)RS(0.369)PLEDETDNTWMFK 165.46 2.9194000000000005e-09 135570000.0 75479.0 65081.0 58667.0 55684.0 80004.0 60176.0 65221.0 69417.0 76572.0 62117.0 True False 71292.02940634392 61954.41107142744 62448.768690518875 60976.1906179949 86299.8596395082 59800.419262846146 71814.17517561973 69176.20862904968 62668.45502303792 61566.69170629472 1.1579642730592727 1.0062975507435474 1.0143271785405024 0.9904087572040282 1.4017296893457198 0.9713112334852323 1.1664452512441446 1.1235979506427978 1.0178954445367827 1.0 15.90986242679085 -3.92164738871292 16.510363369447898 1.0855327674796629 2.5822045672472345 0.03307050270205336 0.12381863148751143 15929899.495161528 48662823.94662778 0.030264581238728456 850013283.8595737 0.00011977125804379429 3.92164738871292 1.4966717997675716 FSESESRS(ph)PLEDETDNTWMFK ddPTM_KYSE-520_SHP099_60min_R1 2 FSESESRSPLEDETDNTWMFK 21 1 A0A1B0GVJ7;Q9BY89-2;Q9BY89 A0A1B0GVJ7;Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 FSES(0.001)ES(0.262)RS(0.738)PLEDETDNTWMFK;FSESES(0.206)RS(0.794)PLEDETDNTWMFK 236.94 1.3909e-26 601300000.0 267660.0 249870.0 212549.0 218544.0 210406.0 238390.0 229163.0 253420.0 295160.0 234010.0 True False 252812.36623301858 237865.87013748387 226250.2486304243 239314.35605235043 226963.75515362178 236902.11958371932 252329.03245535243 252540.9451686725 241566.3843780995 231936.85345702487 1.0900051564244475 1.0255630642223814 0.975482098934078 1.0318082378257862 0.9785583954025463 1.0214078360238446 1.0879212539722842 1.0888349195246168 1.0415178992796799 1.0 17.823372548734632 -6.661050940270257 7.943529242080248 1.0618451375197229 1.0169485655848987 0.14814974752592847 0.03805004016559149 0.3610178784592006 25.322511367363667 0.014604389754558647 0.011276631838724125 2.182473905065147e-07 6.661050940270257 -0.044896571934824214 FSEVLKR ddPTM_KYSE-520_SHP099_60min_R1 1 FSEVLKR 7 1 P12277;H0YJG0;H0YJK0 P12277 CKB Creatine kinase B-type 0 115.46 0.0067263 500630000.0 938810.0 780230.0 573530.0 486990.0 671870.0 557780.0 440130.0 415310.0 548490.0 465600.0 False True 886732.3378286626 742746.5796508944 610500.661480445 533273.3831811174 724742.3465826261 554298.6881220139 484622.635654858 413869.386544083 448898.04230771086 461475.1462313186 1.921516998413128 1.6095050529082793 1.3229329173329434 1.1555841902562813 1.5704905291244926 1.2011452678410697 1.0501597748276925 0.8968400355338471 0.9727458693576028 1.0 18.815893424855272 -1.0000000000518787 0.2711444902445313 0.9217530295047879 7.945566293803581 0.7974043620488961 0.14230082638181618 24.07200719735184 0.33659247936705944 0.18098962902877558 79.2497483385979 0.09999999998805448 1.0000000000518787 7.023813264298793 FSFWDKDAR ddPTM_KYSE-520_SHP099_60min_R1 2 FSFWDKDAR 9 1 E9PQ57;P78406 E9PQ57 RAE1 mRNA export factor 0 ; 70.908 0.024458 1137540000.0 2513820.0 2575300.0 1857210.0 1284820.0 2581300.0 2186170.0 1574800.0 1472360.0 2093460.0 1685350.0 False True 2374373.3934240667 2451578.7223958927 1976928.7282410655 1406928.9065047817 2784433.624412062 2172525.302111413 1733996.1525669044 1467252.726811408 1713340.4358320138 1670419.1101824576 1.4214237486571362 1.4676428852206498 1.1834926433672854 0.8422610217570516 1.6669071896022085 1.300586953817902 1.038060533429543 0.8783740067791382 1.0256949440939214 1.0 20.671778691377988 -6.819969349295331 4.261694959365812 0.9648774167278683 1.3103786241250166 0.3879155779879129 0.20311183998144197 0.24256382654686312 8.879429682874495 0.09198038614117149 0.06205091244602814 1.513668073085988e-07 6.819969349295331 0.3455012073971483 FSGEEGEIEDDES(ph)GTENR ddPTM_KYSE-520_SHP099_60min_R1 1 FSGEEGEIEDDESGTENR 18 0 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 FSGEEGEIEDDES(0.979)GT(0.021)ENR 189.81 1.7758e-12 739860000.0 412980.0 390510.0 325460.0 378900.0 381480.0 406860.0 442330.0 429710.0 367100.0 392660.0 True False 390071.17614478024 371749.31343254005 346439.67235441145 414910.5420795609 411500.3056757111 404320.63582294586 487045.03312478884 428219.43630506744 300443.8938379198 389181.3378848578 1.0022864360988084 0.9552084780142384 0.8901754494119866 1.0661110944695795 1.0573485047154458 1.038900369736041 1.251460400881002 1.1003082486749645 0.771989467611133 1.0 18.570083005762196 -5.279356648064634 24.013478997716614 1.0544321660379607 0.9498219553335927 0.11143476108762096 0.11418706841120979 951.4207657142696 1275132.0103867217 0.03310785766832843 0.04923785979000096 5.255854717491993e-06 5.279356648064634 -0.10461021070436805 FSGEEGEIEDDES(ph)GTENREEKDNIQPTTE ddPTM_KYSE-520_SHP099_60min_R1 4 FSGEEGEIEDDESGTENREEKDNIQPTTE 29 2 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 FSGEEGEIEDDES(0.79)GT(0.21)ENREEKDNIQPTTE;FS(0.002)GEEGEIEDDES(0.905)GT(0.093)ENREEKDNIQPTTE;FSGEEGEIEDDES(0.982)GT(0.018)ENREEKDNIQPTTE;FSGEEGEIEDDES(0.978)GT(0.022)ENREEKDNIQPTTE 215.84 1.8962e-22 5434240000.0 2334170.0 2340500.0 2423480.0 2207370.0 2195560.0 2196250.0 1960290.0 2175570.0 3008500.0 2340490.0 True False 2204688.937047464 2228058.8668378787 2579701.3985051014 2417157.7811300093 2368338.080972437 2182542.3890924286 2158455.24378675 2168023.455451857 2462232.2381132734 2319755.0794736654 0.9503972882980779 0.960471597434074 1.112057657005073 1.0419883558045464 1.0209431598743581 0.9408503545933093 0.9304668681990715 0.934591532802577 1.0614190523388938 1.0 21.145541062486817 -6.241824020707058 22.793968141194597 0.9666901176722014 1.0206717844604638 0.12833233061218985 0.05519209336988916 490.6086508155058 570108.9716703105 0.019239112664566634 0.019200792256493862 5.730281791479391e-07 6.241824020707058 0.05398166678826244 FSGEELDKLWR ddPTM_KYSE-520_SHP099_60min_R1 2 FSGEELDKLWR 11 1 A0A3B3IRQ7;P30533 A0A3B3IRQ7 LRPAP1 Alpha-2-macroglobulin receptor-associated protein 0 ; 142.1 9.661299999999999e-05 977270000.0 1561510.0 1480350.0 1052410.0 737730.0 1382050.0 1290360.0 853650.0 851810.0 1287840.0 986660.0 False True 1474889.927506989 1409231.7639493498 1120250.0325155372 807843.6373933883 1490809.472211168 1282306.3846052606 939945.2728211439 848855.2699239478 1054000.7198044865 977918.9600098652 1.5081923838475435 1.4410516838073508 1.1455448542527862 0.8260844409696677 1.5244713858458463 1.3112603774369245 0.9611688813269984 0.8680221006405117 1.0777996571350388 1.0 19.89935538865711 -1.0000000000000002 0.30863008604050035 0.9994537367691748 5.710035906185754 0.36832751954603715 0.19859805379114298 66.10936948515298 0.9443968424834077 0.2132579926054051 173.61334781594107 0.09999999999999995 1.0000000000000002 4.71058216941658 FSGFSAKPNNSGEAPS(ph)SPTPK ddPTM_KYSE-520_SHP099_60min_R1 1 FSGFSAKPNNSGEAPSSPTPK 21 1 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 FSGFSAKPNNSGEAPS(0.451)S(0.451)PT(0.097)PK 67.866 0.013983 286040000.0 1057300.0 1107700.0 837020.0 818130.0 816440.0 1034100.0 833660.0 1086000.0 1166300.0 1053300.0 True False 998649.4613247043 1054484.429308402 890975.6484793515 895884.8292202459 880689.183091847 1027645.7983200818 917934.4885375442 1082232.9194743042 954529.3200304167 1043968.5814550002 0.9565895746909033 1.0100729543400104 0.8534506347284712 0.8581530566481541 0.8435974020064977 0.9843646797184556 0.8792740556025165 1.036652767812202 0.914327631105593 1.0 19.9936468635489 -7.249782562137836 24.931218579319122 0.9816176532455997 0.9117748389174276 0.22527518039736327 0.06067648856393282 1129.49460003513 2415732.041495966 0.03000845329403427 0.017154069359472016 5.626229426532623e-08 7.249782562137836 -0.06984281432817208 FSGWYDADLS(ph)PAGHEEAK ddPTM_KYSE-520_SHP099_60min_R1 3 FSGWYDADLSPAGHEEAK 18 0 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 1 FS(0.006)GWY(0.004)DADLS(0.99)PAGHEEAK;FSGWYDADLS(1)PAGHEEAK;FSGWYDADLS(1)PAGHEEAK 233.85 1.2337e-23 1201630000.0 2820090.0 2598290.0 1964220.0 2155910.0 2013360.0 2443380.0 2191750.0 2168160.0 2614430.0 2250190.0 True False 2663653.9859899594 2473464.248287199 2090836.7640631201 2360807.0382020217 2171799.9775486276 2428129.95909421 2413313.4794186605 2160639.1590123465 2139715.416416978 2230255.067221327 1.1943270638136487 1.1090499399106335 0.9374877316916453 1.0585367893114348 0.9737899532067744 1.088722987240834 1.0820795858230716 0.9687856742342412 0.9594039031073013 1.0 21.088777285376437 -4.543669174913344 5.358800564977764 1.0135144685700674 1.1766709724869335 0.586044793653427 0.050273428937145315 0.10891849453968135 9.194997395867036 0.013234797704606989 0.04023307534532233 2.859768150589324e-05 4.543669174913344 0.1631565039168661 FSHEEIAMATVTALR ddPTM_KYSE-520_SHP099_60min_R1 2 FSHEEIAMATVTALR 15 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BU78;H3BR68 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ; 184.02 1.0696999999999999e-10 723970000.0 1606160.0 1065998.0 769057.0 1285339.0 1360594.0 1097019.0 1039754.0 1282851.0 969857.0 751993.0 False True 1517063.1029994187 1014785.8559843806 818631.6447547073 1407497.2321087376 1467665.0070791077 1090172.0975024647 1144862.4813411518 1278401.0893006737 793755.416905375 745330.9270617017 2.035422183512626 1.361523880385514 1.0983465398141699 1.8884191987812402 1.9691454544426923 1.4626685381220141 1.5360458553015004 1.7152127234817431 1.064970455519102 1.0 19.50752159910735 -7.770051280345487 22.891645656972486 1.0324833139958585 1.6172167623744196 0.4345054647121144 0.27369567057824584 72.64210063011025 193070.7938269198 0.2563956185916895 0.07101789376551654 1.698043140174398e-08 7.770051280345487 0.5847334483785611 FSKEEPVS(ph)S(ph)GPEEAVGK ddPTM_KYSE-520_SHP099_60min_R1 4 FSKEEPVSSGPEEAVGK 17 1 O00567 O00567 NOP56 Nucleolar protein 56 2 FSKEEPVS(1)S(1)GPEEAVGK;FS(0.001)KEEPVS(0.999)S(1)GPEEAVGK;FSKEEPVS(1)S(1)GPEEAVGK;FSKEEPVS(1)S(1)GPEEAVGK 109.41 0.00011736 5870300000.0 11160610.0 11679880.0 11416500.0 9131710.0 9678710.0 9467170.0 8985320.0 9106990.0 12562490.0 9675050.0 True False 10541508.71517555 11118761.032942707 12152425.85704586 9999584.972851284 10440369.412673164 9408081.880361589 9893643.833872516 9075399.977277454 10281458.49060182 9589336.584075004 1.0992948910232037 1.1594922063125426 1.2672853591589823 1.0427817279307496 1.08874783162909 0.9810983062150072 1.0317339210204461 0.9464054053904998 1.0721762032710607 1.0 23.192999578522546 -5.4096793574055235 6.323040244098376 1.0202354149298232 1.1733480090814086 0.6239238645081813 0.05430538826138725 0.15527705978958956 7.6257320248157505 0.01550689294420306 0.02307608792880991 3.893324857527612e-06 5.4096793574055235 0.1531125941515854 FSKEEPVSS(ph)GPEEAVGK ddPTM_KYSE-520_SHP099_60min_R1 3 FSKEEPVSSGPEEAVGK 17 1 O00567 O00567 NOP56 Nucleolar protein 56 1 FSKEEPVS(0.067)S(0.933)GPEEAVGK;FSKEEPVS(0.165)S(0.835)GPEEAVGK;FSKEEPVS(0.059)S(0.941)GPEEAVGK 167.61 2.1421999999999998e-08 5292890000.0 4349320.0 4677460.0 4632130.0 3416380.0 3496630.0 4060280.0 3643430.0 3825910.0 5077070.0 3752530.0 True False 4108054.549445538 4452747.800589399 4930724.511470048 3741071.7280278997 3771794.887896779 4034938.28643561 4011743.4608501587 3812638.8111841083 4155202.070519441 3719285.503624165 1.1045278845742137 1.1972051611124046 1.3257182076141845 1.0058576370064911 1.014118137535139 1.084869199340536 1.0786328333603363 1.025099796041196 1.117204384140585 1.0 21.826594067167377 -5.279116901672545 24.99114576417933 1.049169409704696 1.207955903045761 0.5963240188282566 0.0612810847415223 547.8043083440957 774442.9128654165 0.017415214363001048 0.025893400577827682 5.258756941962481e-06 5.279116901672545 0.15878649334106498 FSLCS(ph)DNLEGISEGPSNR ddPTM_KYSE-520_SHP099_60min_R1 7 FSLCSDNLEGISEGPSNR 18 0 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;H0Y7I9;C9IZ08;B4DGD8;A0A0A0MQV8 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 FS(0.002)LCS(0.998)DNLEGISEGPSNR;FS(0.014)LCS(0.986)DNLEGISEGPSNR;FS(0.009)LCS(0.991)DNLEGISEGPSNR;FS(0.148)LCS(0.851)DNLEGISEGPSNR;FS(0.077)LCS(0.903)DNLEGIS(0.019)EGPS(0.001)NR;FS(0.034)LCS(0.966)DNLEGISEGPSNR;FSLCS(1)DNLEGISEGPSNR 338.5 1.0111e-53 2044770000.0 2277300.0 2135390.0 2017690.0 2039020.0 2162840.0 2242300.0 2055970.0 2231861.0 2613270.0 2236640.0 True False 2150973.629315 2032802.6591142644 2147753.5258181444 2232807.847746282 2333043.2031237707 2228304.973961049 2263807.5119335623 2224119.1951112733 2138766.0431757555 2216825.1096795863 0.9702946885268255 0.9169882866439022 0.9688421140847574 1.007209742436112 1.0524254678173428 1.0051785159917834 1.0211935538120853 1.0032903296700484 0.9647879004243537 1.0 21.0800635265612 -5.11952336683307 3.4561369472768155 1.0101767095685328 0.9434082075825407 0.547104158580195 0.023759997555410917 0.1729104834413824 3.7870905585084946 0.00674008430808663 0.01286176650971132 7.594105621504952e-06 5.11952336683307 -0.06676850198599205 FSMPGFK ddPTM_KYSE-520_SHP099_60min_R1 2 FSMPGFK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 128.48 0.016086000000000003 1112140000.0 2101860.0 2162310.0 1644380.0 1706040.0 2402600.0 2225000.0 2025490.0 2161980.0 2079330.0 1978670.0 False True 1985265.6358459708 2058429.3819065222 1750379.3659010245 1868181.5286603686 2591670.951075979 2211112.9496781556 2230246.296077428 2154480.595989924 1701776.0876437004 1961140.523181966 1.0123015726710198 1.0496083057662304 0.8925313332779541 0.9525995238878799 1.3215121101424046 1.1274627817544698 1.1372190160340145 1.0985855274125191 0.8677481636464047 1.0 20.903261483148125 FSNS(ph)MESLSSR ddPTM_KYSE-520_SHP099_60min_R1 1 FSNSMESLSSR 11 0 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 FS(0.004)NS(0.99)MES(0.006)LSSR 119.17 0.00050039 0.0 780260.0 748900.0 742960.0 647100.0 793700.0 645550.0 638910.0 724970.0 848600.0 771790.0 True False 736977.4223902513 712921.7198781829 790852.3903780308 708600.1894422906 856159.6744647468 641520.8829953857 703497.2579607052 722455.2482792708 694515.6314651567 764952.5410435335 0.9634289486572343 0.9319816349725812 1.0338581126865274 0.9263322251020069 1.11923240793055 0.8386414170482202 0.919661312584187 0.9444445367731067 0.9079198959424487 1.0 19.545010717764903 -6.2912312383483044 24.994994564721072 0.9185067298476172 0.989815184911514 0.24358654318422568 0.06369102048258689 1040.8945611816637 873293.8577037742 0.021512178750597005 0.018974880095566086 5.114094651248416e-07 6.2912312383483044 0.07130845506389683 FSPPS(ph)PLPQAVFSTSSR ddPTM_KYSE-520_SHP099_60min_R1 3 FSPPSPLPQAVFSTSSR 17 0 A0A1X7SBS4;Q99594 A0A1X7SBS4 TEAD3 Transcriptional enhancer factor TEF-5 1 FSPPS(1)PLPQAVFSTSSR;FSPPS(1)PLPQAVFSTSSR;FSPPS(1)PLPQAVFSTSSR 137.68 1.3519e-05 1609638000.0 379848.0 482010.0 352039.0 293959.0 369863.0 452780.0 382731.0 561800.0 718090.0 567870.0 True False 358777.074231785 458853.51608824 374731.9972223153 321896.7749780036 398969.11386739917 449954.03206978727 421421.184574602 559851.2469251063 587702.9575757877 562839.113596175 0.6374416162008241 0.8152480966656088 0.6657888340915438 0.57191614300096 0.7088510805836621 0.7994363241653096 0.748741824074726 0.9946914373949988 1.0441757571195593 1.0 19.10236306425942 -7.177942549043067 1.543353121119775 1.040683629161994 0.6903457345512406 0.8093277024341388 0.06836716068886578 0.1796750562770149 0.7866732687446224 0.0541636993653674 0.022361308785015584 6.638308799377347e-08 7.177942549043067 -0.3503378946107535 FSPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 FSPSPR 6 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 FSPS(1)PR 105.14 0.010506999999999999 571140000.0 641850.0 674650.0 676790.0 598360.0 619430.0 605240.0 531970.0 481610.0 648200.0 569790.0 True False 606245.3010037468 642238.8013297049 720416.9663022876 655227.9544965057 668175.616925411 601462.4726576209 585746.719126883 479939.40731861914 530503.2197922624 564742.1038899125 1.0734905310370213 1.137224933126111 1.2756565542751201 1.1602250832430088 1.183151764890654 1.0650214823983912 1.0371932871522982 0.8498381898796334 0.939372531529322 1.0 19.107232668725374 -6.745132834117388 1.747780533447187 0.9238338825878366 1.169387092851835 0.7212300402822364 0.062307099990659295 0.1828055309034944 1.1422278456321182 0.03377545109264448 0.021182406295868865 1.7983207932623507e-07 6.745132834117388 0.24555321026399846 FSPVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 FSPVTPK 7 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FSPVT(1)PK 121.73 0.011587 373810000.0 1299100.0 1466800.0 1171200.0 958440.0 989620.0 1519600.0 1061700.0 1396900.0 1604500.0 1522700.0 True False 1227036.3333083554 1396332.726288315 1246697.425986256 1049529.8494345078 1067497.463832435 1510115.612733 1169026.9971934734 1392054.4799389099 1313163.2461534785 1509210.0626426726 0.813032170723655 0.9252076704572815 0.8260595770235265 0.6954166788397562 0.7073219893347481 1.0006000159373054 0.7745952840696488 0.9223729117611238 0.8700997155121599 1.0 20.525362193771347 -6.25776903426339 24.984947206756285 0.8999982467155239 0.7970999036967866 0.3242102735154827 0.08552495597320699 482.9376558943333 3287484.0088300733 0.030162747831757375 0.02906697235316064 5.523711222311223e-07 6.25776903426339 -0.10289834301873724 FSRS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 3 FSRSPIR 7 1 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2;H7C2G8 P18583-10 SON Protein SON 1 FS(0.022)RS(0.978)PIR;FS(0.016)RS(0.984)PIR;FS(0.002)RS(0.998)PIR 92.838 0.004483600000000001 1468530000.0 624800.0 578290.0 605010.0 539800.0 579630.0 602310.0 538210.0 601860.0 736440.0 553810.0 True False 590141.0984920793 550508.080369013 644009.9126502258 591102.4297032122 625243.583356434 598550.7598744499 592617.5192234134 599772.2881351806 602721.0601416444 548903.6742576597 1.075126886862598 1.0029229283508132 1.1732658075593834 1.0768782528239083 1.1390770597446207 1.0904477196002254 1.0796384630233575 1.0926731160003909 1.09804522798425 1.0 19.066193470910083 -9.40117055313303 9.365300953892632 1.0000000013922767 1.0923273450865527 0.30375481487039757 0.04178708525026282 0.0 0.0 0.03985822299839383 0.009667039027752991 3.970355977682305e-10 9.40117055313303 0.09232734369427598 FSS(ph)LGR ddPTM_KYSE-520_SHP099_60min_R1 4 FSSLGR 6 0 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 FS(0.268)S(0.732)LGR;FS(0.201)S(0.799)LGR;FS(0.385)S(0.615)LGR;FS(0.173)S(0.827)LGR 108.7 0.0093402 3845190000.0 5135790.0 5162450.0 5633160.0 5356690.0 5163730.0 4834810.0 4635500.0 4553860.0 5526650.0 5189350.0 True False 4850897.490756453 4914438.153004571 5996282.506974678 5865788.207052418 5570086.173395307 4804634.157408292 5104101.578120324 4538063.722538915 4523149.675508965 5143376.396253203 0.9431348431528729 0.9554887246021102 1.1658261120735383 1.1404547820621238 1.0829629691214022 0.9341401031642027 0.9923640007833201 0.8823121959039902 0.8794125350818083 1.0 22.294284304414102 -6.267520141035404 23.350661916076557 0.9337101500735961 1.062520664845676 0.38843291636912214 0.0750314782784428 224.66056191590806 862711.7141079728 0.028777203214786908 0.026079527991123886 5.401070659366091e-07 6.267520141035404 0.12881051477207983 FSS(ph)PIVK ddPTM_KYSE-520_SHP099_60min_R1 6 FSSPIVK 7 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 FS(0.104)S(0.896)PIVK;FS(0.024)S(0.976)PIVK;FS(0.003)S(0.997)PIVK;FSS(1)PIVK;FSS(1)PIVK;FSS(1)PIVK 185.72 0.0001134 3418553000.0 16839460.0 15764560.0 14018250.0 12291190.0 13229680.0 14413620.0 13382870.0 15057970.0 17452200.0 14580410.0 True False 15905341.585168745 15007206.87451303 14921888.824993022 13459341.002118984 14270780.549417645 14323659.251119139 14735741.10382463 15005737.416626606 14283320.414160004 14451238.910787316 1.1006213158164588 1.0384719931043909 1.032568135999356 0.9313624309450785 0.9875126027267486 0.9911717147259296 1.0196870451588025 1.0383703092352432 0.9883803390377854 1.0 23.78468984509187 -4.455315333661663 1.7547581798459968 0.9966508694264016 1.1117173333839798 0.5761320264446612 0.027593489683045924 0.4764328852585515 1.9866145097191574 0.00830900691009434 0.0807449688708576 3.504972915590556e-05 4.455315333661663 0.11506646395757825 FSS(ph)VSSPQPR ddPTM_KYSE-520_SHP099_60min_R1 1 FSSVSSPQPR 10 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 FSS(0.927)VS(0.015)S(0.058)PQPR 152.64 0.00013477 625440000.0 885770.0 916750.0 747050.0 773160.0 741440.0 817700.0 722750.0 941040.0 1168600.0 846940.0 True False 836634.5723612813 872707.9539301965 795206.0383222611 846640.8939409705 799787.1097834734 812596.4309895859 795812.6233602538 937775.7518803864 956411.6980086982 839436.7705093486 0.9966618115306445 1.0396351274922824 0.947309036557632 1.0085820918081188 0.9527663522509066 0.9680257757788276 0.9480316461207378 1.1171487654887553 1.1393493013516338 1.0 19.6790621345508 -7.2649886816418165 24.99632573277924 1.096186781594846 0.9807443802296446 0.5448514388323348 0.04379875501502609 214.50667506042137 1510666.5071411273 0.02220622871448748 0.011333289161695983 5.4326448958610966e-08 7.2649886816418165 -0.11544240136520145 FSSSIENSDS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 2 FSSSIENSDSPVR 13 0 O95425-2;O95425-3;A0A6I8PIX7;O95425-4;O95425 O95425-2 SVIL Supervillin 1 FSSS(0.001)IENS(0.017)DS(0.981)PVR;FSSSIENSDS(1)PVR 174.44 4.5014e-07 1002610000.0 694130.0 653050.0 625140.0 522010.0 629280.0 685410.0 579410.0 681860.0 803020.0 722690.0 True False 655625.2251861503 621676.4977519651 665437.5246593652 571621.6734519707 678800.7558865782 681132.1019500695 637982.4172966654 679494.7868073209 657211.8104868594 716287.5288443115 0.9153101216825088 0.8679147307715998 0.929008949427069 0.79803382082367 0.9476651882823983 0.9509199511668684 0.890679219734585 0.948634116112068 0.9175251334435944 1.0 19.45017929819702 FSSVSS(ph)PQPR ddPTM_KYSE-520_SHP099_60min_R1 3 FSSVSSPQPR 10 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 FSS(0.017)VS(0.028)S(0.955)PQPR;FSS(0.282)VS(0.059)S(0.659)PQPR;FSS(0.002)VS(0.046)S(0.952)PQPR 158.02 8.758299999999999e-05 2247620000.0 3154560.0 3480920.0 2840030.0 2589230.0 2852000.0 3029490.0 2649130.0 3421170.0 4202300.0 3060980.0 True False 2979570.268340546 3313691.3782325573 3023102.878008664 2835309.640719614 3076436.174339749 3010581.829177746 2916929.913417299 3409302.759777082 3439268.2513622763 3033862.0986064035 0.9821047138923038 1.0922353325665966 0.9964536223967854 0.9345545540853706 1.014032963381197 0.9923265235294145 0.961457646594149 1.1237500746468128 1.133627086393312 1.0 21.532724080031684 -7.26475214138211 24.972113155430147 1.0965164387652861 0.9980422713460477 0.3862190545387334 0.05120611005303278 280.41621556572574 2113795.045108718 0.02673452153948433 0.013673942138953907 5.43560461398461e-08 7.26475214138211 -0.09847416741923842 FST(ph)PPAILR ddPTM_KYSE-520_SHP099_60min_R1 1 FSTPPAILR 9 0 P10243;P10243-2 P10243 MYBL1 Myb-related protein A 1 FS(0.354)T(0.646)PPAILR 100.88 0.011211 279930000.0 324440.0 379980.0 278520.0 221600.0 258160.0 320460.0 234890.0 283460.0 333280.0 367900.0 True False 306442.6664448943 361725.19043839234 296473.8448477565 242660.79737353045 278475.7232705295 318459.8902713985 258634.97350548624 282476.74342006154 272764.7533050993 364640.69222186867 0.8403962393161449 0.992004453025494 0.8130574869229474 0.6654792033629683 0.7636989760349857 0.873352582595551 0.7092871942775867 0.7746714764576692 0.7480370653178042 1.0 18.476116042919962 -4.937656299553269 7.67810992135836 0.7771023202036793 0.9143903019403168 0.20788278524624626 0.09410282312369808 0.29804212436248034 31.405256288136382 0.023187319892684286 0.04860453367446614 1.1543664614883667e-05 4.937656299553269 0.13728798173663748 FSTLTDDPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 FSTLTDDPSPR 11 0 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-4 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 FSTLT(0.001)DDPS(0.999)PR;FSTLTDDPS(1)PR;FSTLTDDPS(0.999)PR;FSTLTDDPS(1)PR 145.06 7.6461e-05 1100470000.0 2730780.0 2802330.0 2634260.0 2274320.0 2507470.0 2706330.0 2452060.0 2710040.0 3347150.0 2682670.0 True False 2579298.1897250316 2667701.860416914 2804068.614565024 2490470.689000759 2704793.6234473013 2689438.7906078566 2699938.1545994426 2700639.5037680906 2739391.934785056 2658903.630885681 0.9700608024164709 1.0033089689408194 1.054595804824633 0.936653235593643 1.0172589905209668 1.0114841167492798 1.0154328736239655 1.0156966474443105 1.0302712377253642 1.0 21.342400058530732 FSTYSQS(ph)PPDTPSLR ddPTM_KYSE-520_SHP099_60min_R1 6 FSTYSQSPPDTPSLR 15 0 A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4;H3BSV5;H3BMG9 A0A0A0MTL6 FAM65A Protein FAM65A 1 FSTYS(0.033)QS(0.967)PPDTPSLR;FSTYS(0.019)QS(0.981)PPDTPSLR;FSTYS(0.004)QS(0.996)PPDTPSLR;FSTYS(0.002)QS(0.998)PPDTPSLR;FSTYS(0.14)QS(0.822)PPDT(0.038)PSLR;FSTYS(0.236)QS(0.764)PPDTPSLR 239.58 9.8877e-19 24255700000.0 12221300.0 12026500.0 10339800.0 9254460.0 10154700.0 12095300.0 10972800.0 12652300.0 14712700.0 11803900.0 True False 11543360.126442451 11448728.887855466 11006320.052264942 10134001.095945138 10953817.117660554 12019808.746176265 12082037.708208108 12608412.124369008 12041244.556984924 11699326.629295235 0.9866687624172965 0.9785801568431922 0.940765259489807 0.8662037924960138 0.9362775709015665 1.0273932104843144 1.0327122313137715 1.07770408707091 1.0292254365164506 1.0 23.479922160128506 -6.298365784583362 4.90256986650169 1.0393591273118343 0.9392826852762076 0.6284372798358915 0.03515975822924239 0.13989088138447434 8.519878900485477 0.013691843211327461 0.01232036739830032 5.030767138730856e-07 6.298365784583362 -0.10007644203562671 FSTYT(ph)SDKDENK ddPTM_KYSE-520_SHP099_60min_R1 1 FSTYTSDKDENK 12 1 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 FS(0.054)T(0.044)Y(0.001)T(0.501)S(0.401)DKDENK 84.46799999999999 0.011237 1819800000.0 1066600.0 885920.0 800550.0 899760.0 953650.0 858240.0 922060.0 987710.0 1102500.0 916920.0 True False 1007433.5717856146 843359.0734069687 852154.7339252887 985272.9198772906 1028696.8294737396 852883.4058120362 1015270.8232384025 984283.8645432472 902313.7917632977 908796.8021529659 1.1085355597631674 0.9279952035581845 0.9376735612476952 1.0841509538140435 1.131932712611584 0.9384753597190602 1.1171593263017614 1.0830626408581656 0.9928663807197498 1.0 19.793598232776134 -5.270675307659172 24.813139662796054 1.0547321731661592 0.9850608164946051 0.1148733011514611 0.07253401851427174 1072.8702471305824 2882358.089154694 0.020100143792167395 0.030299678122957155 5.361973858826799e-06 5.270675307659172 -0.06967135667155411 FSTYTS(ph)DKDENK ddPTM_KYSE-520_SHP099_60min_R1 3 FSTYTSDKDENK 12 1 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 FSTYT(0.006)S(0.994)DKDENK;FS(0.005)T(0.024)YT(0.158)S(0.813)DKDENK;FS(0.002)T(0.002)YT(0.158)S(0.837)DKDENK 201.48 4.7087000000000003e-08 3372670000.0 2344490.0 2170030.0 2016530.0 2209760.0 2180810.0 2155190.0 2278210.0 2398250.0 2352480.0 2167040.0 True False 2214436.466075057 2065778.5015185613 2146518.750362079 2419774.9260114315 2352427.3398884563 2141738.6597828614 2508513.6999869463 2389931.0305057606 1925328.933194849 2147841.71153161 1.0310054293972897 0.9617927105277556 0.9993840508998274 1.126607660620348 1.095251725142705 0.9971585188442975 1.1679229835787777 1.1127128305937957 0.8964016867993084 1.0 21.03445624495527 -5.097147186416329 10.162721904256223 1.0650108454011917 0.9924706379324305 0.10661020054446546 0.07567098235510701 0.8543698773294236 84.276470245241 0.020348896633034692 0.03530450807385967 7.995632297101188e-06 5.097147186416329 -0.07254020746876122 FSTYTS(ph)DKDENKLSEASGGR ddPTM_KYSE-520_SHP099_60min_R1 2 FSTYTSDKDENKLSEASGGR 20 2 Q8WU90 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 FS(0.007)T(0.042)YT(0.16)S(0.791)DKDENKLSEASGGR;FS(0.001)T(0.005)YT(0.024)S(0.971)DKDENKLSEASGGR 176.53 1.7265e-09 3479000000.0 1239750.0 1310040.0 1347710.0 941120.0 1024430.0 941760.0 939820.0 1081540.0 1696050.0 1058370.0 True False 1170978.5961196448 1247103.7119898708 1434585.5430122414 1030563.7618419543 1105046.812790629 935882.1265118653 1034826.1773592995 1077788.3901733346 1388090.0739411693 1048993.6651994002 1.1162875763382774 1.1888572384779963 1.3675826562208506 0.9824308725887848 1.053435163100412 0.8921713805907171 0.9864942102987747 1.0274498559230678 1.323258776474414 1.0 20.00057453492953 -5.28152903120708 24.74250748947933 1.0314696344316576 1.2207039865647533 0.3352540046012925 0.11997993513664541 800.3641865334138 985730.2105513007 0.034676771090235134 0.051510173797469715 5.22963006597297e-06 5.28152903120708 0.1892343521330957 FSVCVLGDQQHCDEAK ddPTM_KYSE-520_SHP099_60min_R1 2 FSVCVLGDQQHCDEAK 16 0 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 ; 195.62 4.3694e-12 1526750000.0 891080.0 803680.0 503870.0 761850.0 912820.0 826400.0 724490.0 835700.0 707390.0 662700.0 False True 841650.016076059 765070.0064517264 536350.2664205051 834255.9949414455 984653.7407646596 821242.1310624853 797728.5195410171 832801.1517538461 578945.8078507379 656828.9935727987 1.281383776160569 1.164793293137312 0.81657519943364 1.2701266282469335 1.4991021261236803 1.2503134592085636 1.214514778347101 1.2679116785388125 0.8814254753000201 1.0 19.32515828602342 -7.760387394621609 24.997717909544203 0.9407126597527671 1.216986290064478 0.3247736910494966 0.1613547817445795 35.02685705349253 832498.5905129601 0.13527783734296733 0.04447902102201629 1.7362513857908028e-08 7.760387394621609 0.2762736303117108 FSVIRPQT(ph)PPPQTPSSCLTPVS(ph)PGTSDGR ddPTM_KYSE-520_SHP099_60min_R1 1 FSVIRPQTPPPQTPSSCLTPVSPGTSDGR 29 1 Q8IY92-2;Q8IY92 Q8IY92-2 SLX4 Structure-specific endonuclease subunit SLX4 2 FS(0.008)VIRPQT(0.99)PPPQT(0.004)PS(0.029)S(0.026)CLT(0.019)PVS(0.832)PGT(0.048)S(0.044)DGR 87.85700000000001 0.004094400000000001 281660000.0 149500.0 136950.0 147080.0 141930.0 142170.0 133310.0 147550.0 151290.0 157170.0 153900.0 True False 141206.93697913858 130370.71643385898 156561.01213632044 155418.98452718963 153357.97016335293 132477.96284116645 162465.7939492294 150765.21030135138 128631.88993327662 152536.56573238838 0.9257251617089203 0.8546850114783797 1.0263834863765884 1.0188965759191027 1.005384967381563 0.8684997082836325 1.0650940852717306 0.9883873389797914 0.8432856037872889 1.0 17.2187955982752 -4.7564777245453875 24.999734469712227 0.9783592139306972 0.8902050821815414 0.20879483113950303 0.06753457130196591 183.81248970563112 926125.344942218 0.017226367309137996 0.04265704610004818 1.751952291516369e-05 4.7564777245453875 -0.08815413174915587 FSVPT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 FSVPTPR 7 0 F8VRB8;H0YHC1;A0A3B3IS46;A0A3B3IRX3;Q71F56 F8VRB8 MED13L Mediator of RNA polymerase II transcription subunit 13-like 1 FS(0.016)VPT(0.984)PR 99.44200000000001 0.025206 927790000.0 543780.0 480970.0 457320.0 369630.0 484500.0 509860.0 468050.0 473590.0 497200.0 465030.0 True False 513615.4394014442 457863.4792493111 486799.578937871 404759.52406668814 522627.3935720928 506677.7746170355 515365.0617277996 471947.2268267375 406921.0133920291 460910.1959878659 1.1143503525683902 0.993389782293653 1.0561701241920165 0.8781743766791047 1.1339028689785193 1.0992982559890572 1.1181463682382224 1.023946163341464 0.882863987245667 1.0 18.8141261569268 -7.587408315489339 7.277071035360716 0.9433771325905257 1.0529486035683613 0.26149834567663377 0.07596707775690294 0.3282988863787437 30.61044380743293 0.05289006549651388 0.01969671237883779 2.585780669689654e-08 7.587408315489339 0.1095714709778356 FSVS(ph)PVVR ddPTM_KYSE-520_SHP099_60min_R1 6 FSVSPVVR 8 0 P13639 P13639 EEF2 Elongation factor 2 1 FSVS(1)PVVR;FSVS(1)PVVR;FS(0.001)VS(0.999)PVVR;FS(0.002)VS(0.998)PVVR;FS(0.005)VS(0.995)PVVR;FS(0.001)VS(0.999)PVVR 157.75 0.00025881 2890890000.0 4074070.0 3628540.0 3390740.0 2829610.0 3237180.0 3467110.0 2981760.0 3271980.0 3777840.0 3474100.0 True False 3848073.2156428066 3454219.491850419 3609312.525775822 3098535.2836467284 3491927.648965339 3445470.48043085 3283185.399973261 3260630.2650658754 3091879.487596422 3443322.176808905 1.1175466651247268 1.0031647677684385 1.0482064530832687 0.8998679544178735 1.0141158653360398 1.0006239043318148 0.953493524970106 0.9469431257483031 0.8979349967367323 1.0 21.715369743301714 -1.0000000000028235 0.5754701335828829 0.9565973692516656 9.244009113769422 0.5354634067845238 0.04330914801030379 118.53690197364884 1.0007049274076882 0.020181445842809415 1225.384444468451 0.09999999999934986 1.0000000000028235 8.287411744517756 FSWFAGEK ddPTM_KYSE-520_SHP099_60min_R1 1 FSWFAGEK 8 0 A0A0A0MTN3;P21266 A0A0A0MTN3 GSTM3 Glutathione S-transferase Mu 3 0 85.67 0.062439999999999996 0.0 439620.0 312960.0 267770.0 221130.0 312840.0 301310.0 212590.0 298620.0 349080.0 311370.0 False True 415233.4022392574 297924.9318374627 285030.8826471482 242146.12871484135 337458.7281838876 299429.4125247305 234080.6718784594 297584.1569184319 285695.87159068655 308611.50404219434 1.345489059223422 0.9653720873500862 0.9235912430800955 0.7846309212171636 1.0934742346408097 0.970247086070361 0.7584962608732018 0.9642678675962296 0.9257460199916115 1.0 18.235432316369057 -4.257393708465313 3.6459983433436216 0.9233130661458604 1.3942982351028796 0.6457106545786453 0.09226939147298793 0.17395733927633253 4.243809708809367 0.023429174134424136 0.22442825394030927 5.528486985102806e-05 4.257393708465313 0.47098516895701925 FT(ph)DTRK ddPTM_KYSE-520_SHP099_60min_R1 8 FTDTRK 6 1 P13639 P13639 EEF2 Elongation factor 2 1 FT(1)DTRK;FT(0.996)DT(0.004)RK;FT(0.961)DT(0.039)RK;FT(0.831)DT(0.169)RK;FT(0.997)DT(0.003)RK;FT(1)DTRK;FT(0.994)DT(0.006)RK;FT(0.999)DT(0.001)RK 117.89 0.009842 26354790000.0 122871300.0 45438200.0 30882530.0 32482650.0 24077770.0 45204000.0 41381800.0 32914900.0 43708300.0 44371400.0 True False 116055384.051136 43255280.66787133 32873267.297595106 35569791.28973518 25972553.515228786 44921865.06842762 45565076.19144846 32800725.894295435 35771974.51657846 43978303.91642688 2.638923599047364 0.9835595467726648 0.7474882924103902 0.8088031625168943 0.5905765161972846 1.0214551510170518 1.0360807974322284 0.7458388108060627 0.8134005027696583 1.0 25.390288629965493 -4.2616958280874355 4.212481598182912 0.839759771213678 2.780957859285042 0.9412625930373791 0.13363922638659523 0.04687702336614473 1.900071941809063 0.03472215821685384 0.2749031527350992 5.4739921706676415e-05 4.2616958280874355 1.9411980880713642 up FT(ph)DTRKDEQER ddPTM_KYSE-520_SHP099_60min_R1 5 FTDTRKDEQER 11 2 P13639 P13639 EEF2 Elongation factor 2 1 FT(0.973)DT(0.027)RKDEQER;FT(0.982)DT(0.018)RKDEQER;FT(0.998)DT(0.002)RKDEQER;FT(0.997)DT(0.003)RKDEQER;FT(0.99)DT(0.01)RKDEQER 136.83 0.00025084 21077300000.0 45725500.0 22585400.0 18133900.0 10932200.0 9085890.0 15124100.0 11155800.0 10502690.0 21391600.0 13528700.0 True False 43189015.363475636 21500363.48262345 19302840.209265847 11971193.001114208 9800897.851357583 15029704.881899973 12283537.134115987 10466258.619736284 17507424.678352606 13408846.243169328 3.220934492069128 1.6034461946027656 1.439560112720288 0.8927832256419912 0.7309277527401219 1.1208797990025678 0.9160771114348044 0.7805487832383757 1.3056622740581545 1.0 23.676681770889623 -3.671782512338826 1.0517113663627518 0.952665098005439 8.251195487212211 0.930103820637609 0.1837489234746632 1.2239435278408686 0.4620577398047306 0.056677354912927545 13.469905855952431 0.00021292050505367614 3.671782512338826 7.298530389206772 up FT(ph)GSFDDDPDPHRDPYGEEVDR ddPTM_KYSE-520_SHP099_60min_R1 1 FTGSFDDDPDPHRDPYGEEVDR 22 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 FT(0.53)GS(0.47)FDDDPDPHRDPYGEEVDR 83.881 0.011914 649510000.0 266730.0 239600.0 182010.0 265990.0 286380.0 254020.0 244090.0 242230.0 268540.0 210380.0 True False 251933.9551869273 228089.25635306767 193742.65582629645 291269.60962719045 308916.47672069364 252434.56695606548 268764.9992888337 241389.7606669068 219779.9053425087 208516.1968731635 1.2082224736727478 1.0938682930794583 0.9291491919169544 1.3968680322918239 1.481498710187016 1.2106233028488271 1.288940635399745 1.157654725564267 1.0540183862848633 1.0 17.669799926409027 -7.7226940981395815 2.5163122290400564 1.0065093419022009 1.2284817961851284 0.24113795159693874 0.14330172370572025 0.46139716251216 5.437897269654888 0.14622771920303274 0.04245967835042401 1.89367698891309e-08 7.7226940981395815 0.22197245428292756 FT(ph)GSFDDDPDPHRDPYGEEVDRR ddPTM_KYSE-520_SHP099_60min_R1 2 FTGSFDDDPDPHRDPYGEEVDRR 23 2 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 FT(0.543)GS(0.457)FDDDPDPHRDPYGEEVDRR;FT(0.5)GS(0.5)FDDDPDPHRDPYGEEVDRR 145.14 5.6105e-07 2657700000.0 509490.0 492030.0 514060.0 469870.0 496380.0 414900.0 358480.0 461760.0 576510.0 463240.0 True False 481227.57405686565 468392.1402479128 547197.1301250813 514526.3035284334 535442.2819841399 412310.4552006597 394718.6568276501 460158.2623355939 471830.3166344293 459136.05399526603 1.0481154112585274 1.0201597896137824 1.191797344955888 1.1206401654829277 1.1661952428368012 0.8980136750596172 0.8596986740486293 1.00222637349307 1.0276481503221138 1.0 18.808562199621193 -6.262106952904334 24.99945530954706 0.9515428523485372 1.1096289547802785 0.5671299558559144 0.06623514965397083 48.73004313199172 1824832.0365970978 0.024552471604376718 0.022915615672982836 5.468812668639163e-07 6.262106952904334 0.15808610243174126 FT(ph)PVASK ddPTM_KYSE-520_SHP099_60min_R1 1 FTPVASK 7 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FT(1)PVASK 82.287 0.057428999999999994 287000000.0 965760.0 826460.0 742900.0 849470.0 826940.0 868840.0 848840.0 959740.0 984340.0 965950.0 True False 912187.3676051702 786755.6210582494 790788.5226820277 930203.3733975306 892015.4733550187 863417.2472801667 934649.0310800668 956410.8859449998 805608.6691920952 957392.4344977279 0.952783137547694 0.8217692063453594 0.825981587265096 0.9716009233826238 0.9317135181071201 0.9018425633717663 0.9762444295587182 0.9989747688436215 0.8414612860553234 1.0 19.868750880081148 -5.265469659511144 24.994085035634004 0.9447619901960101 0.8623370992848244 0.2931668859416693 0.05615432019421319 410.3401898315033 2544760.4957639477 0.015319923249929038 0.023698288571014813 5.426631612983414e-06 5.265469659511144 -0.08242489091118577 FTATMS(ph)TPDKK ddPTM_KYSE-520_SHP099_60min_R1 2 FTATMSTPDKK 11 1 C9J5J4;H7C4T7;H0Y322;Q5TKA1-3;Q5TKA1;Q5TKA1-2;B1B047 C9J5J4 LIN9 Protein lin-9 homolog 1 FTAT(0.01)MS(0.561)T(0.429)PDKK;FTATMS(0.53)T(0.469)PDKK 133.32 0.00013269 2863750000.0 2935800.0 2861460.0 2439480.0 2041800.0 2296940.0 2597970.0 2229730.0 2649120.0 3052120.0 2857100.0 True False 2772945.321627793 2723991.1664609774 2596732.784106006 2235852.058110447 2477696.1101991395 2581755.105561957 2455132.868467739 2639930.821029255 2497931.9456839897 2831788.316790162 0.9792205530288126 0.9619331891123228 0.9169939605688493 0.7895548000017141 0.8749580946811777 0.9117048369238213 0.8669902527356412 0.9322486449204728 0.8821040509537099 1.0 21.433281993738277 -9.973049559746755 13.848729709542804 0.999999975194899 0.9000443802273213 0.2512795306707636 0.050804684836010236 0.0 0.0 0.053004738978562844 0.012855537498053425 1.0640215899040026e-10 9.973049559746755 -0.09995559496757778 FTATMST(ph)PDKK ddPTM_KYSE-520_SHP099_60min_R1 1 FTATMSTPDKK 11 1 C9J5J4;H7C4T7;H0Y322;Q5TKA1-3;Q5TKA1;Q5TKA1-2;B1B047 C9J5J4 LIN9 Protein lin-9 homolog 1 FT(0.042)AT(0.213)MS(0.213)T(0.533)PDKK 91.20200000000001 0.0050488 1144100000.0 888430.0 883280.0 793570.0 725960.0 779350.0 800900.0 766100.0 835160.0 963960.0 848170.0 True False 839147.016858703 840845.9029696903 844724.7919568926 794955.0201321681 840680.4111050784 795901.2860212304 843544.8644154831 832263.0248878091 788929.1634541021 840655.8736662755 0.9982051433234005 1.0002260488618084 1.0048401711307526 0.9456366689799044 1.0000291884462733 0.9467622970980253 1.0034365914040522 0.9900163086449828 0.9384686268989206 1.0 19.681155821935967 -5.153801310979119 21.103075987605507 0.9755195287933591 1.0010060262568428 0.21311704505482132 0.023033744948372573 13.587019506531975 2649.5355335371955 0.005926163575941894 0.010264420005268378 7.017762865011367e-06 5.153801310979119 0.025486497463483637 FTDEEVDELYR ddPTM_KYSE-520_SHP099_60min_R1 4 FTDEEVDELYR 11 0 J3QRS3;P19105;O14950 J3QRS3 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B 0 ;;; 256.24 8.4249e-15 3246280000.0 1961350.0 2225540.0 1908450.0 1247130.0 2061450.0 2323390.0 1681580.0 1814940.0 1996620.0 2264190.0 False True 1852550.0056457107 2118621.7177963564 2031471.7406279624 1365656.8602366922 2223674.3869539527 2308888.861192241 1851570.5170392774 1808644.396750182 1634084.138694272 2244131.0381131633 0.8255088380236972 0.9440721962375541 0.9052375757593897 0.6085459525504888 0.9908843776001556 1.0288565248549502 0.8250723712622656 0.805944201133133 0.7281589670753759 1.0 21.097725488816568 -10.314745473326488 6.209557365986904 1.000008016640429 0.8557487121437931 0.1232563417180933 0.11840712518900949 1.3598245331673134e-05 1.5005434504704757e-06 0.1186350867205391 0.028771636261501275 4.84456209323709e-11 10.314745473326488 -0.14425930449663593 FTDKDQQPS(ph)GS(ph)EGEDDDAEAALKK ddPTM_KYSE-520_SHP099_60min_R1 15 FTDKDQQPSGSEGEDDDAEAALKK 24 2 H3BNW0;Q9NXG2 H3BNW0 THUMPD1 THUMP domain-containing protein 1 2 FT(0.011)DKDQQPS(0.996)GS(0.993)EGEDDDAEAALKK;FT(0.005)DKDQQPS(0.998)GS(0.998)EGEDDDAEAALKK;FTDKDQQPS(1)GS(1)EGEDDDAEAALKK;FTDKDQQPS(1)GS(1)EGEDDDAEAALKK;FT(0.003)DKDQQPS(0.997)GS(1)EGEDDDAEAALKK;FT(0.001)DKDQQPS(0.999)GS(1)EGEDDDAEAALKK;FTDKDQQPS(1)GS(1)EGEDDDAEAALKK;FTDKDQQPS(1)GS(1)EGEDDDAEAALKK;FTDKDQQPS(1)GS(1)EGEDDDAEAALKK;FTDKDQQPS(1)GS(1)EGEDDDAEAALKK;FTDKDQQPS(1)GS(1)EGEDDDAEAALKK;FTDKDQQPS(1)GS(1)EGEDDDAEAALKK;FTDKDQQPS(1)GS(1)EGEDDDAEAALKK;FTDKDQQPS(1)GS(1)EGEDDDAEAALKK;FT(0.002)DKDQQPS(0.998)GS(1)EGEDDDAEAALKK 154.8 2.1144000000000002e-07 87121200000.0 61147170.0 54110370.0 52268060.0 51918140.0 52689440.0 50229600.0 50060380.0 53797300.0 65657780.0 50133870.0 True False 57755214.58623867 51510826.6038788 55637342.77945286 56852424.41584207 56835799.166095324 49916098.4346759 55120971.75262711 53610689.722684264 53735982.24994138 49689722.9153607 1.1623170989424991 1.0366495037941768 1.1196951706537603 1.1441485498456494 1.1438139685928002 1.0045557814782105 1.1093032626991655 1.0789090092935791 1.081430507098478 1.0 25.566444161226354 -6.237524884118928 24.999372195572818 1.0631754849892927 1.1177981162851165 0.3464018878565551 0.04480823880681587 1104.9292284600754 1155055.340714962 0.014690482058053648 0.014680878509236769 5.787288275097454e-07 6.237524884118928 0.05462263129582379 FTDKDQQPS(ph)GSEGEDDDAEAALKK ddPTM_KYSE-520_SHP099_60min_R1 1 FTDKDQQPSGSEGEDDDAEAALKK 24 2 H3BNW0;Q9NXG2 H3BNW0 THUMPD1 THUMP domain-containing protein 1 1 FTDKDQQPS(0.832)GS(0.168)EGEDDDAEAALKK 116.34 0.00015248 622040000.0 250760.0 233270.0 192580.0 196130.0 239280.0 217020.0 226890.0 200050.0 304480.0 185510.0 True False 236849.84292233325 222063.3590545916 204994.01493889472 214770.1362313655 258109.97468303482 215665.49768051837 249826.25543301034 199356.07324202082 249194.10731618028 183866.5257245962 1.288161844517027 1.2077421824307943 1.1149066646636063 1.1680763281134607 1.4037899158960772 1.1729459553913155 1.3587370210454277 1.0842434339604894 1.3552989394569557 1.0 17.488299324676483 -10.609516568010132 6.335746246124494 0.999212786894893 1.2344749517037163 0.32347792883842785 0.10361691811529543 0.0011036514207651788 6.801995838591426e-05 0.09610045580946934 0.02323286135390934 2.4574428798162573e-11 10.609516568010132 0.23526216480882334 FTDLFEK ddPTM_KYSE-520_SHP099_60min_R1 2 FTDLFEK 7 0 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 0 ; 138.55 0.012988 518810000.0 1110520.0 1102380.0 766550.0 678110.0 1094130.0 1104810.0 809020.0 896150.0 912340.0 906320.0 False True 1048917.241833264 1049420.0100938862 815963.0395233651 742557.3705187942 1180231.8062518758 1097914.4709815385 890803.6368743187 893041.4648129817 746682.054219798 898290.7099062894 1.1676812754110395 1.1682409697895715 0.9083507494010343 0.8266336970091326 1.3138639788170567 1.2222262335275338 0.9916652004196373 0.9941564072349637 0.8312253995120272 1.0 19.776822888075387 -7.116864905826847 2.961658103347442 0.9314531933572477 1.0924778856931376 0.19959785360052973 0.1424098643480601 0.5036190293636986 8.402758411374524 0.08435406902505509 0.04435005838288656 7.640734237480742e-08 7.116864905826847 0.1610246923358899 FTGS(ph)FDDDPDPHRDPYGEEVDRR ddPTM_KYSE-520_SHP099_60min_R1 6 FTGSFDDDPDPHRDPYGEEVDRR 23 2 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 1 FT(0.137)GS(0.863)FDDDPDPHRDPYGEEVDRR;FT(0.158)GS(0.831)FDDDPDPHRDPY(0.011)GEEVDRR;FT(0.106)GS(0.894)FDDDPDPHRDPYGEEVDRR;FT(0.173)GS(0.827)FDDDPDPHRDPYGEEVDRR;FT(0.015)GS(0.985)FDDDPDPHRDPYGEEVDRR;FT(0.01)GS(0.99)FDDDPDPHRDPYGEEVDRR 228.63 9.688699999999999e-22 11929020000.0 1879924.0 1952518.0 1809032.0 1737764.0 1693032.0 1567602.0 1649495.0 1567965.0 2040979.0 1582446.0 True False 1775640.868184418 1858716.104490731 1925645.0972735407 1902920.5680822018 1826263.986365631 1557818.0144455626 1816242.0521198527 1562526.0953807821 1670388.662493663 1568426.7595643585 1.1321158972559322 1.1850831370710624 1.2277558295475666 1.2132670884872885 1.1643922645599905 0.9932360596029728 1.1580024639622488 0.9962378452499654 1.0650090304233428 1.0 20.580886730905863 -6.127510021826361 5.373071671403587 1.0499785144949243 1.1915404634105184 0.6602519667201628 0.05097993501360934 0.14424917719008779 5.716051847016868 0.0165580063567138 0.016623699398458154 7.455726669138973e-07 6.127510021826361 0.14156194891559415 FTGSFDDDPDPHRDPYGEEVDRR ddPTM_KYSE-520_SHP099_60min_R1 1 FTGSFDDDPDPHRDPYGEEVDRR 23 2 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 0 170.53 2.1832e-10 532600000.0 136650.0 168270.0 98773.0 79635.0 115180.0 139960.0 100780.0 123880.0 127140.0 113230.0 False True 129069.75209497863 160186.05662158082 105140.06562238764 87203.4864568643 124244.0107154463 139086.45772447405 110967.82591801652 123450.2891938094 104054.58093858117 112226.87029160712 1.150078869343923 1.4273413862950817 0.9368528708783794 0.7770285870957394 1.1070789944744444 1.2393329455154165 0.9887812573733978 1.1000065213708594 0.9271806356909775 1.0 16.776058613799584 -4.769167497467144 24.999953873199793 1.0157504787085583 1.2887101462484776 0.41424264291706847 0.1326271024222593 156.84602498353325 507392.04038191115 0.03631050658267726 0.07791228350307 1.7015021512960164e-05 4.769167497467144 0.2729596675399193 FTLDCTHPVEDGIMDAANFEQFLQER ddPTM_KYSE-520_SHP099_60min_R1 4 FTLDCTHPVEDGIMDAANFEQFLQER 26 0 P35268 P35268 RPL22 60S ribosomal protein L22 0 ;;; 171.79 4.2526999999999997e-10 289747000.0 113029.0 104783.0 84068.0 122772.0 114934.0 99249.0 91365.0 91508.0 94194.0 71583.0 False True 106759.05605227467 99749.06739751036 89487.15779355592 134440.21396725232 123978.65191499467 98629.55017645274 100601.06583647143 91190.58010612766 77090.74403750757 70948.83031073125 1.5047331377375364 1.405929695537531 1.2612915167400678 1.8948897871670447 1.7474375739812933 1.3901504752719607 1.4179383281707914 1.2853006837004157 1.0865682168384858 1.0 16.11449127921487 -7.474621615877032 1.199395896330031 1.0020498239508178 1.5434465657418484 0.5726668256611 0.1689152093837275 0.38084141467734384 0.9765225294052494 0.16857004444861023 0.05910178924169307 3.352574088685523e-08 7.474621615877032 0.5413967417910306 FTPPSTALS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 3 FTPPSTALSPGK 12 0 A8MZI9;Q01196-7;Q01196-3;Q01196-4;Q01196;Q01196-9;Q01196-10;Q01196-2;Q01196-8;C9JWM1;H9KVB1;Q01196-6;Q01196-5 A8MZI9 RUNX1 Runt-related transcription factor 1 1 FTPPS(0.059)T(0.059)ALS(0.882)PGK;FTPPSTALS(1)PGK;FTPPSTALS(1)PGK 145.92 2.5985e-05 2173730000.0 3874500.0 4422800.0 3361200.0 3011190.0 3061390.0 4375600.0 3291800.0 4244300.0 4797300.0 4782900.0 True False 3659573.7613757346 4210322.049241855 3577868.330110148 3297372.5922527164 3302303.9760736227 4348290.257353597 3624567.268872063 4229577.513927063 3926231.250091672 4740527.227039894 0.7719761085858936 0.8881548080192944 0.7547405929243571 0.6955708583308106 0.6966111189568392 0.9172587877042487 0.7645915939892903 0.8922166905405834 0.8282267060289221 1.0 22.176616089531453 -8.225784228892719 0.5618569446765912 1.002779443807546 0.7751362995228859 0.45795513876225724 0.07066384721495299 1.1464418492312702 0.7887847184348444 0.08656859737921062 0.03505317709306909 5.945874949422871e-09 8.225784228892719 -0.22764314428466004 FTPVASKFS(ph)PGAPGGSGSQPNQK ddPTM_KYSE-520_SHP099_60min_R1 4 FTPVASKFSPGAPGGSGSQPNQK 23 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 FT(0.001)PVAS(0.099)KFS(0.9)PGAPGGSGSQPNQK;FT(0.01)PVAS(0.152)KFS(0.838)PGAPGGSGSQPNQK;FTPVAS(0.001)KFS(0.999)PGAPGGSGSQPNQK;FTPVAS(0.189)KFS(0.811)PGAPGGSGSQPNQK 218.22 3.9323e-21 11148400000.0 6102700.0 7196600.0 5211640.0 4309780.0 4496300.0 6011100.0 4220270.0 5509400.0 7306100.0 6260300.0 True False 5764171.065569161 6850864.533683174 5547590.653318827 4719380.195417396 4850133.2295525335 5973582.495195674 4646896.077466037 5490289.177303631 5979496.411793037 6204838.612439696 0.9289800147280113 1.1041164745120529 0.8940749308445842 0.7605967681344368 0.7816695215615765 0.9627297127792509 0.7489148981489645 0.884839964458784 0.9636828264646748 1.0 22.564962255737683 -4.921097632399953 7.293101554858798 0.8593117470001308 1.0148744742419706 0.26987281223728177 0.0923992141004002 0.2522893245892358 19.60284692924507 0.023556043510652547 0.04953446786511705 1.1992296777269834e-05 4.921097632399953 0.15556272724183984 FTRPLFK ddPTM_KYSE-520_SHP099_60min_R1 1 FTRPLFK 7 1 P09960-4;P09960 P09960-4 LTA4H Leukotriene A-4 hydrolase 0 81.78399999999999 0.014053999999999999 291080000.0 501370.0 397370.0 313590.0 274760.0 526180.0 431310.0 313200.0 359410.0 399070.0 315530.0 False True 473558.0066436833 378279.7487354698 333804.51316174073 300873.10779039375 567587.3724453339 428618.0343036789 344861.31253743597 358163.2905969244 326608.9477360357 312734.6496786253 1.514248603825398 1.2095869425540167 1.067372974196391 0.962071545636466 1.8149168089580168 1.370548593653241 1.1027281847145014 1.1452625763246342 1.044364441457536 1.0 18.254579547074048 -6.799942141037552 8.478987510795118 1.0843029231300891 1.3122174642397326 0.22844274887590477 0.22421895870364555 0.501837607927921 98.96009228145928 0.10056115600931123 0.06825697813116766 1.5851043542146985e-07 6.799942141037552 0.2279145411096435 FTS(ph)PADLDASGAGPGPK ddPTM_KYSE-520_SHP099_60min_R1 5 FTSPADLDASGAGPGPK 17 0 P52735-3;P52735-2;P52735 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 1 FT(0.001)S(0.999)PADLDASGAGPGPK;FT(0.005)S(0.995)PADLDASGAGPGPK;FT(0.004)S(0.996)PADLDASGAGPGPK;FT(0.018)S(0.982)PADLDASGAGPGPK;FTS(1)PADLDASGAGPGPK 288.41 1.5710999999999999e-37 2406250000.0 4338150.0 4420260.0 3613300.0 3063320.0 3333280.0 4397560.0 3550020.0 4197520.0 4596290.0 4185720.0 True False 4097504.1716123754 4207904.074654476 3846219.0994844083 3354457.0117792552 3595590.172231138 4370113.196847948 3908890.6664564125 4182959.782828534 3761719.599041931 4148637.7772408864 0.9876746034785139 1.014285724759756 0.9271041016365603 0.8085683040784021 0.8666917589084963 1.053385094457284 0.9422106427079008 1.0082730784008032 0.9067360905014269 1.0 21.98420626852192 -6.24953233791664 24.97584556203937 0.980143656060149 0.9201628719217558 0.1816745617011638 0.0649269357327664 1551.1658339795163 3253680.234549149 0.02356278156166959 0.023378509070613993 5.629471983321551e-07 6.24953233791664 -0.05998078413839314 FTS(ph)QDASTPASSELNK ddPTM_KYSE-520_SHP099_60min_R1 2 FTSQDASTPASSELNK 16 0 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 1 FT(0.024)S(0.976)QDASTPASSELNK;FT(0.078)S(0.922)QDASTPASSELNK 254.59 5.8727e-24 673230000.0 1174340.0 993220.0 820230.0 761920.0 826620.0 1066010.0 785540.0 1073240.0 1170910.0 886310.0 True False 1109197.019211248 945504.220346385 873103.3382144014 834332.6477203986 891670.2911755701 1059356.6361736672 864950.049331601 1069517.180936098 958302.2602390589 878457.9829387465 1.262663713864378 1.0763226457153314 0.9939044953448634 0.9497695552031603 1.0150403417049316 1.205927496531766 0.9846231306795611 1.217493837733926 1.0908914015821287 1.0 19.744613757533788 -7.245917139448664 24.84739612555939 1.1156444931519183 1.0656045742491096 0.014931179024188834 0.10520016815645533 2750.8625516799825 4403485.586083082 0.0506306936952428 0.02909777652742368 5.6765289954394395e-08 7.245917139448664 -0.05003991890280868 FTSGAFLS(ph)PSVSVQECR ddPTM_KYSE-520_SHP099_60min_R1 4 FTSGAFLSPSVSVQECR 17 0 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 FTSGAFLS(0.999)PS(0.001)VSVQECR;FTSGAFLS(0.963)PS(0.037)VSVQECR;FTSGAFLS(1)PSVSVQECR;FTSGAFLS(0.999)PS(0.001)VSVQECR 427.08 2.1347999999999993e-102 2846770000.0 1809310.0 3764340.0 2399960.0 1507330.0 2537570.0 2607750.0 2130630.0 2658020.0 4112020.0 2281340.0 True False 1708943.9675299353 3583495.4560104613 2554665.261671771 1650586.1900047113 2737262.3222017256 2591474.064954253 2346014.873344946 2648799.9490065333 3365380.8235886777 2261129.102455665 0.7557923011445754 1.584825674977453 1.1298183986475232 0.7299831700065764 1.210573212838207 1.1460973467370006 1.0375413198640857 1.1714501158424986 1.4883629687193698 1.0 21.10861193653754 -7.5289798642431585 24.642733166719427 1.2727564962720284 1.0997922522052728 0.057720924626248116 0.2510831999764279 391.19555177446944 1579995.412228264 0.1635795049161771 0.062214450709101664 2.95814961588923e-08 7.5289798642431585 -0.1729642440667556 FTSQQGPIKPVS(ph)PNS(ph)SPFGTDYR ddPTM_KYSE-520_SHP099_60min_R1 1 FTSQQGPIKPVSPNSSPFGTDYR 23 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 2 FTSQQGPIKPVS(0.998)PNS(0.485)S(0.441)PFGT(0.075)DYR 67.69 0.013266 593780000.0 348220.0 356210.0 280970.0 334840.0 335210.0 295270.0 309720.0 327170.0 420780.0 348210.0 True False 328903.5424406401 339097.13691788906 299081.77576789464 366663.09292668325 361589.1199159987 293427.1104051544 341029.52017590887 326035.1236320522 344376.9590005992 345125.1303032804 0.9529979522256593 0.9825338903020645 0.8665893889125809 1.0624062426415493 1.0477044067995005 0.8502049970899073 0.9881329704279357 0.9446867092684536 0.9978321737915065 1.0 18.396760001945154 -5.251934015701028 24.987612271525755 0.9793179841729227 0.9388897724591829 0.1188983330180573 0.06134270488876075 1949.0606620090714 5123660.493607724 0.017208143702754388 0.029251675855564003 5.598426544268785e-06 5.251934015701028 -0.04042821171373978 FTSQQGPIKPVS(ph)PNSSPFGTDYR ddPTM_KYSE-520_SHP099_60min_R1 2 FTSQQGPIKPVSPNSSPFGTDYR 23 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 FTSQQGPIKPVS(0.979)PNS(0.008)S(0.012)PFGTDYR;FTSQQGPIKPVS(0.584)PNS(0.161)S(0.237)PFGT(0.018)DYR 172.05 8.900499999999998e-11 1813170000.0 1668070.0 2034320.0 1447440.0 1417000.0 1506680.0 1966680.0 1518150.0 1990030.0 2197500.0 1723120.0 True False 1575538.8318848957 1936588.2136234285 1540744.2983858823 1551671.2539634143 1625247.1441634705 1954405.2206170955 1671619.4177161797 1983127.050406496 1798489.3944669806 1707854.497367073 0.9225252117869743 1.1339304470076252 0.902151969480528 0.9085500294993281 0.9516309185993568 1.1443628386552362 0.9787832747422246 1.1611803309144888 1.0530694489721668 1.0 20.703753637450774 -6.240082779630737 24.79288698370253 1.0720094592098643 0.9667221123180991 0.29117980350793793 0.08069368034856052 961.1357665278357 1115783.4324294333 0.02640125520639442 0.026376828735994656 5.75330264826822e-07 6.240082779630737 -0.10528734689176522 FTSSQTQSPT(ph)PPKPPS(ph)PSFELGLSSFPPLPGAAGNLK ddPTM_KYSE-520_SHP099_60min_R1 1 FTSSQTQSPTPPKPPSPSFELGLSSFPPLPGAAGNLK 37 1 H0Y4V9;Q92615 H0Y4V9 LARP4B La-related protein 4B 2 FT(0.063)S(0.069)S(0.076)QT(0.075)QS(0.308)PT(0.432)PPKPPS(0.529)PS(0.442)FELGLS(0.004)S(0.001)FPPLPGAAGNLK 96.626 0.012646 118190000.0 116600.0 133750.0 125690.0 120210.0 118690.0 132200.0 88058.0 109760.0 142010.0 101080.0 True False 110131.96556366257 127324.4492371571 133792.17851111045 131634.72225754577 128030.22774627805 131374.8907628999 96959.76200326154 109379.26817817659 116224.56378077621 100184.50983905004 1.099291354926959 1.2708995576432758 1.33545773419516 1.3139229055372095 1.277944344409761 1.311329375908095 0.9678119118317875 1.0917782435018972 1.1601051297001412 1.0 16.6122999360044 -6.751777757906001 24.99939561277997 1.0625720024816343 1.2738527663502368 0.6421492839324063 0.07782219082758368 131.1617947099572 339381.0103393422 0.030724370660188658 0.023491411408295873 1.7710150103414796e-07 6.751777757906001 0.2112807638686025 FTVDTISAGQGDVMVFVEDPEGNKEEAQVTPDSDKNK ddPTM_KYSE-520_SHP099_60min_R1 2 FTVDTISAGQGDVMVFVEDPEGNKEEAQVTPDSDKNK 37 2 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 ; 300.43 2.5833999999999996e-54 2212840000.0 1474870.0 1186540.0 844650.0 1692230.0 1220800.0 776160.0 1118100.0 1375870.0 992220.0 747600.0 False True 1393056.0210195468 1129536.83736715 899097.4904877833 1853059.030412498 1316870.0145981647 771315.6975380671 1231128.459604427 1371097.428100471 812057.8598307302 740976.8456239993 1.8800263857724349 1.5243888443179794 1.2133948527509328 2.500832571700645 1.7772080495837737 1.0409443994009266 1.661493833275797 1.850391731128694 1.0959287926829502 1.0 19.499068935692147 -6.18799375756526 24.853094730045658 1.403634387691362 1.773676862015431 0.2330546017396633 0.39640506007603443 250.80469056513058 84868.2534610216 0.13404652518839616 0.13404651462293524 6.486437569161155e-07 6.18799375756526 0.3700424743240691 FTVQAS(ph)PTMDK ddPTM_KYSE-520_SHP099_60min_R1 1 FTVQASPTMDK 11 0 G3V4P9;G3V347;A0A087WW79;J3KPI6;P80192;P80192-4 G3V4P9 MAP3K9 Mitogen-activated protein kinase kinase kinase 9 1 FTVQAS(0.943)PT(0.057)MDK 119.87 0.00047719 0.0 202040.0 190430.0 177020.0 150930.0 166670.0 150170.0 150410.0 183920.0 225870.0 208450.0 True False 190832.43844324513 181281.45695874243 188430.99244201416 165274.341821241 179785.98077742168 149232.7333272668 165614.9106601395 183282.02444725082 184857.70171934346 206603.2951716458 0.9236659961531676 0.8774373942493705 0.9120425319715539 0.7999598539022877 0.8701989996241623 0.7223153590231192 0.8016082731040025 0.887120528716545 0.8947471121685832 1.0 17.656503738755376 -8.088236803298935 1.7097730072864161 0.9986020406025846 0.8440410500644225 0.39602824027508277 0.057051107072004524 0.5144801023156477 3.2589934517651318 0.05849098487827315 0.01674297436975298 8.161372432283699e-09 8.088236803298935 -0.15456099053816208 FTYFSSLS(ph)PMAR ddPTM_KYSE-520_SHP099_60min_R1 2 FTYFSSLSPMAR 12 0 Q9H425 Q9H425 C1orf198 Uncharacterized protein C1orf198 1 FTYFSSLS(1)PMAR;FTYFSSLS(1)PMAR 220.53 7.0488e-11 1072210000.0 699980.0 631970.0 597350.0 570350.0 557020.0 548770.0 523910.0 567640.0 702190.0 552030.0 True False 661150.7140244643 601609.2125936913 635856.1367937931 624555.8925180195 600854.3049897363 545344.9228741045 576871.935668863 565670.989328172 574689.9967694057 547139.4436728411 1.20837698994298 1.0995537235539175 1.1621464037127611 1.141493086891153 1.0981739882548365 0.9967201765116944 1.0543417082059254 1.0338698769932073 1.0503538054423989 1.0 19.06154903882114 -5.993835933214106 3.091486524742412 1.0310364694357785 1.1496832474936327 0.787328128238912 0.030770610266500364 0.11565894489521254 2.277974356014574 0.009901694227216356 0.010790489769862268 1.0142944912437447e-06 5.993835933214106 0.11864677805785417 FVADGIFK ddPTM_KYSE-520_SHP099_60min_R1 2 FVADGIFK 8 0 E9PPU1;E9PL09;P23396;P23396-2;E9PQX2;E9PQ96;E9PJH4;F2Z2S8;E9PK82;H0YCJ7 E9PPU1 RPS3 40S ribosomal protein S3 0 ; 129.68 0.0061466 1641730000.0 4580900.0 4618800.0 3325700.0 3246800.0 4615200.0 4551700.0 3966900.0 4172000.0 4255900.0 4119700.0 False True 4326788.34520225 4396905.915039856 3540079.943308142 3555374.8958139834 4978389.983104072 4523291.151932617 4367912.965213139 4157528.3057521204 3483135.8425083193 4083202.6630781014 1.0596555454684493 1.076827744750066 0.8669860977802828 0.8707319203043873 1.219236563524167 1.1077802218425175 1.0697272032832212 1.0182027807108622 0.8530401574245093 1.0 21.961269744470314 -7.6082752123312005 8.119557816501231 0.9275066920198674 1.0372108962704447 0.15249125878867442 0.10428199923552574 0.5240637073646264 43.54782321715798 0.07676100483858728 0.028704547406840985 2.4644771036177005e-08 7.6082752123312005 0.10970420425057736 FVAFSGEGQS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 FVAFSGEGQSLR 12 0 Q92890;Q92890-1 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 FVAFSGEGQS(1)LR 120.9 0.00012268 62982000.0 40165.0 42064.0 46834.0 44580.0 47383.0 36542.0 30536.0 42909.0 40418.0 46130.0 True False 37936.967383057556 40043.18230064878 49852.99457704949 48816.86979653427 51111.77252760883 36313.92782343334 33622.87688264094 42760.15869403588 33079.110054865276 45721.32408859694 0.82974341052645 0.875809769267721 1.0903663787261795 1.0677046382545463 1.1178979075183058 0.7942448856701015 0.735387208329485 0.9352344785810877 0.723494140081462 1.0 15.480579564125282 -6.280747046712706 24.82448271915513 0.8272314771822629 0.9988026223435381 0.3194070164684988 0.11524838458814829 913.1007096251443 1173998.7228528326 0.04205957394212787 0.03715041517434135 5.239054946423396e-07 6.280747046712706 0.17157114516127525 FVCVGGS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 4 FVCVGGSPSR 10 0 F8WD51;C9J486;C9JIP2;B4DND0;Q16831 F8WD51 UPP1 Uridine phosphorylase 1 1 FVCVGGS(0.986)PS(0.014)R;FVCVGGS(0.84)PS(0.16)R;FVCVGGS(0.945)PS(0.055)R;FVCVGGS(0.903)PS(0.097)R 154.05 0.00012236 2438430000.0 2541820.0 2458150.0 2009840.0 1980060.0 2020330.0 2111380.0 1852730.0 2220880.0 2395320.0 2010820.0 True False 2400820.1776074497 2340056.7842416246 2139397.502257699 2168244.307073251 2179318.476894749 2098202.094243355 2040022.0293023102 2213176.2856372907 1960390.2691033687 1993005.699194287 1.2046228360400726 1.1741345171203676 1.0734527769401734 1.0879267971736397 1.093483314059655 1.0527827868688966 1.0235906651581732 1.1104716291237964 0.9836350542780166 1.0 20.9265144050343 -1.0000000000000049 0.3049417025912823 1.0213256014468777 2.713363608568965 0.7424860268789808 0.034122749585045145 27.41375161217764 0.3913815803691453 0.03322432161394243 25.44605821461604 0.09999999999999888 1.0000000000000049 1.6920380071220875 FVCVGGSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 FVCVGGSPSR 10 0 F8WD51;C9J486;C9JIP2;B4DND0;Q16831 F8WD51 UPP1 Uridine phosphorylase 1 1 FVCVGGS(0.374)PS(0.626)R;FVCVGGS(0.168)PS(0.832)R 125.54 0.00043477 2004600000.0 1551830.0 1488450.0 1321130.0 1207070.0 1234520.0 1303760.0 1150580.0 1366370.0 1726730.0 1294240.0 True False 1465746.8964035902 1416942.627791001 1406292.1536827376 1321789.569881171 1331669.7005420437 1295622.7502347853 1266891.85497868 1361630.381383154 1413199.3593210324 1282774.040503483 1.1426384149684625 1.1045925338767046 1.0962898447264915 1.03041496642883 1.03811712623945 1.0100163468589207 0.9876188751694964 1.061473290220872 1.1016744295560876 1.0 20.2908356326942 -5.018021516614259 1.6960512012658788 1.0316520289171942 1.1315773582261524 0.5934784802473232 0.03155346001439652 0.294452593480435 1.6189845307323663 0.010188892258989817 0.029588297173486874 9.593531003065607e-06 5.018021516614259 0.09992532930895814 FVDGEWYR ddPTM_KYSE-520_SHP099_60min_R1 6 FVDGEWYR 8 0 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 0 ;;;;; 157.86 0.0019339000000000001 3258990000.0 4414130.0 4026370.0 2942470.0 2571350.0 4361640.0 4181920.0 3361990.0 2992820.0 3208950.0 3546500.0 False True 4169269.409550003 3832937.141495416 3132146.32431846 2815730.33089543 4704876.25366312 4155819.0860755406 3701852.7590604564 2982438.60594944 2626285.5710465624 3515080.7691352507 1.1861091347200223 1.09042647757945 0.891059560229964 0.8010428538710737 1.3384831139514817 1.182282672582206 1.053134480312711 0.8484694383518115 0.7471480012940522 1.0 21.74512640908916 -7.243797064516987 5.511053096482704 0.8469567168056934 1.0751673176957208 0.284715325770733 0.15360777364316455 0.232578223066483 24.6188373818455 0.08392998382652084 0.044845144370925925 5.7043075874209587e-08 7.243797064516987 0.22821060089002743 FVDKYSISLS(ph)PPEQQK ddPTM_KYSE-520_SHP099_60min_R1 2 FVDKYSISLSPPEQQK 16 1 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 FVDKYSIS(0.037)LS(0.963)PPEQQK;FVDKYSIS(0.024)LS(0.976)PPEQQK 165.1 3.4734e-08 975130000.0 1935940.0 1775880.0 1660600.0 1466430.0 1490430.0 1433130.0 1330530.0 1469740.0 2248820.0 1431470.0 True False 1828549.5489992867 1690564.0591497736 1767644.9330539443 1605799.066301743 1607718.3616133237 1424185.3040774183 1465032.9571214395 1464641.8149798932 1840490.9761389028 1418788.289466807 1.2888107144487861 1.1915548441586745 1.2458835093135994 1.1318102060915771 1.1331629768508438 1.0038039604997302 1.0325944807960121 1.0323187933347817 1.2972273522433537 1.0 20.436227896901986 -5.47120520876031 1.6230753233130812 1.074801153714389 1.2443581546363907 0.41721313744839605 0.0843018700779495 0.38694686129001793 2.038966543693665 0.02829622338362608 0.049751631251144283 3.3790513470971862e-06 5.47120520876031 0.16955700092200177 FVDKYSISLS(ph)PPEQQKK ddPTM_KYSE-520_SHP099_60min_R1 1 FVDKYSISLSPPEQQKK 17 2 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 FVDKYSIS(0.021)LS(0.979)PPEQQKK 92.31 0.0009562999999999999 449310000.0 531770.0 490760.0 587790.0 438250.0 431520.0 431370.0 396220.0 369980.0 706260.0 388440.0 True False 502271.6580427867 467183.1529542225 625679.8838972528 479901.1482353331 465478.1689870579 428677.6598214226 436273.7843345554 368696.62573398114 578020.9873657562 384998.72380174714 1.3046060337109808 1.2134667573464368 1.6251479426187476 1.2465006208240197 1.2090382128818515 1.1134521579405745 1.1331824168830544 0.9576567477762324 1.5013581906401454 1.0 18.554494137989956 -5.651065849609992 3.14799959218103 1.1448697303031066 1.3716264754503475 0.2623048265649486 0.16882287125399342 0.33604448198857173 6.626128604589908 0.05100692654539321 0.06764068862051763 2.2332335846115077e-06 5.651065849609992 0.22675674514724098 FVEGLPINDFSR ddPTM_KYSE-520_SHP099_60min_R1 1 FVEGLPINDFSR 12 0 A0A5K1VW95;P40925;P40925-3;B8ZZ51;B9A041;P40925-2 A0A5K1VW95 MDH1 Malate dehydrogenase, cytoplasmic 0 160.18 2.1252e-05 0.0 93816.0 121190.0 88584.0 67596.0 94070.0 112270.0 95589.0 83537.0 91614.0 80114.0 False True 88611.83946244058 115367.8504901014 94294.26637941127 74020.30351652153 101472.77381491593 111569.28128555804 105252.06897873865 83247.22964468246 74979.20700100024 79404.25228774891 1.1159583638080839 1.4529177867203622 1.1875216208535435 0.932195712243259 1.277926192758469 1.405079426744653 1.3255218196290193 1.0483976266536355 0.9442719355795584 1.0 16.276928648758734 -7.419747157705288 4.671687994111772 0.9783977594256021 1.2433601018896916 0.396846906542906 0.14012686560759002 0.2457541657059634 8.55322330745202 0.08874734141233247 0.039807989104818434 3.8041080357126384e-08 7.419747157705288 0.26496234246408945 FVHGPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 FVHGPSPR 8 0 Q5T200-2;Q5T200;Q5T9K0 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 FVHGPS(1)PR;FVHGPS(1)PR;FVHGPS(1)PR;FVHGPS(1)PR;FVHGPS(1)PR;FVHGPS(1)PR;FVHGPS(1)PR 117.52 0.00065331 3901590000.0 4177010.0 3733320.0 3916150.0 3107070.0 3600170.0 3405310.0 3038490.0 3159970.0 3894240.0 3394940.0 True False 3945302.928637003 3553965.703372436 4168591.2950615417 3402364.9986253395 3883482.896834766 3384056.1971543934 3345650.2220047 3149008.8016125415 3187144.181801638 3364863.4728233544 1.1725001506009454 1.0561990797179095 1.238858969681704 1.0111450363751366 1.1541279247137637 1.0057038642090685 0.9942900355471085 0.935850392458956 0.9471838033081926 1.0 21.682116538921566 -6.441401915807293 1.49804473795119 0.9565006614825878 1.1282893332560948 0.5920881209869487 0.061990333847608714 0.2664055147297583 1.2034909375276308 0.02835101410843881 0.022255666997549727 3.619079173930095e-07 6.441401915807293 0.17178867177350698 FVHS(ph)ENQHLVSPEALDFLDK ddPTM_KYSE-520_SHP099_60min_R1 2 FVHSENQHLVSPEALDFLDK 20 0 P68400;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8Y5A0;A0A2R8YDP2;Q8NEV1;P68400-2;A0A2R8YF43;A0A087WY74 P68400 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 1 FVHS(0.5)ENQHLVS(0.5)PEALDFLDK;FVHS(0.942)ENQHLVS(0.058)PEALDFLDK 101.74 0.0011964 545070000.0 226150.0 248750.0 223554.0 263790.0 223798.0 204717.0 195045.0 208425.0 266880.0 204354.0 True False 213605.00868115207 236799.6766186376 237964.6485390466 288860.52228864457 241409.62936356524 203439.28526708452 214762.0520557602 207702.0223217609 218421.31949731396 202543.58254500636 1.0546125727468447 1.169129496196303 1.1748812060543536 1.4261647723371245 1.1918897964092376 1.004422271546812 1.060325137717157 1.0254682953265541 1.078391705887692 1.0 17.62787284937888 -6.213973506368912 6.5591485367812465 1.0370307666126344 1.2131345740871293 0.4749578684980357 0.08891360287216543 0.21544847603364461 23.535327945151288 0.03144217685309287 0.03120247089870819 6.109792958519336e-07 6.213973506368912 0.17610380747449494 FVINYDYPNSSEDYIHR ddPTM_KYSE-520_SHP099_60min_R1 2 FVINYDYPNSSEDYIHR 17 0 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ; 176.83 2.2581000000000002e-08 980150000.0 499990.0 505040.0 336480.0 338860.0 549070.0 468400.0 372740.0 318870.0 343940.0 349160.0 False True 472254.5579946459 480777.12031950505 358170.0391870351 371065.1525180264 592278.685219049 465476.5418558419 410420.1967918383 317763.9143948176 281489.1660218309 346066.7140423694 1.3646344442615974 1.3892613788353043 1.0349739650002394 1.072235894009143 1.7114581125145008 1.3450485786935666 1.185956869407527 0.9182157702572729 0.8133956679444411 1.0 18.4006906589469 -7.154064076188454 2.953087135865459 0.8922323977197488 1.3143811378305479 0.5081530320490117 0.17955056972200067 0.2408315886945464 4.0084560756484375 0.10773878377269513 0.05500667490852503 7.013518127248951e-08 7.154064076188454 0.42214874011079906 FVKDFQDYMEPEEGCQGS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 5 FVKDFQDYMEPEEGCQGSPQR 21 1 O43237;B4E2E0;H3BUM4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 FVKDFQDYMEPEEGCQGS(1)PQR;FVKDFQDYMEPEEGCQGS(1)PQR;FVKDFQDYMEPEEGCQGS(1)PQR;FVKDFQDYMEPEEGCQGS(1)PQR;FVKDFQDYMEPEEGCQGS(1)PQR 172.06 1.8315000000000001e-09 1733210000.0 1833972.0 2407270.0 2455540.0 1349963.0 1574365.0 1470840.0 1108766.0 1092460.0 2702360.0 1258812.0 True False 1732237.9172274554 2291621.1358140665 2613828.0374029116 1478263.0776388247 1698258.5685885001 1461659.941979605 1220850.8877933682 1088670.511242081 2211679.5449518953 1247659.9050209178 1.3883895044286234 1.8367354169128696 2.0949843999027036 1.1848285511860228 1.3611550405316806 1.171521130155336 0.9785125600977775 0.8725699261962166 1.7726621942818745 1.0 20.250793298230775 -5.282503612099162 24.387629009664646 1.183646049956305 1.7797063092495844 0.4681052407235039 0.28406923961087027 482.7252164050373 558885.8250811948 0.07983214015615599 0.11856141482612016 5.217907644007147e-06 5.282503612099162 0.5960602592932793 FVKDFQDYMEPEEGCQGS(ph)PQRR ddPTM_KYSE-520_SHP099_60min_R1 1 FVKDFQDYMEPEEGCQGSPQRR 22 2 O43237;B4E2E0;H3BUM4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 FVKDFQDYMEPEEGCQGS(1)PQRR 63.138000000000005 0.011138 0.0 96243.0 112700.0 122940.0 75734.0 57969.0 66310.0 55686.0 35744.0 107950.0 69199.0 True False 90904.20893433609 107285.72283385127 130864.9091109548 82931.73658974266 62530.83050150806 65896.1346935544 61315.2843229874 35620.01240671231 88349.00119804805 68585.95069600735 1.3254056845730648 1.5642521791288195 1.9080425040834632 1.2091650804305383 0.9117148609437913 0.9607818222951375 0.8939918992266268 0.5193485261229438 1.2881501284371812 1.0 16.06562546123884 -5.5238354171455315 3.9973615952037793 0.9093701168796742 1.5968481929186495 0.6487191959741303 0.21995707196190795 0.12612756457486235 4.6229511811903246 0.06490370151616719 0.091242400535452 2.9933988181446014e-06 5.5238354171455315 0.6874780760389754 FVKEPAFEDITLES(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 1 FVKEPAFEDITLESER 16 1 O75400-3;O75400;O75400-2 O75400-3 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 FVKEPAFEDITLES(1)ER 139.26 0.00014268 0.0 101300.0 103520.0 105020.0 85276.0 81238.0 84416.0 74016.0 70556.0 117940.0 96336.0 True False 95680.68706345657 98546.74381331222 111789.75723794113 93380.60540083578 87630.9684190087 83889.12843147467 81498.25960654808 70311.25770389425 96525.06902545432 95482.53798827385 1.0020752388798784 1.0320917927989586 1.1707874507029752 0.9779862095025562 0.9177695761477414 0.878580840004243 0.8535409858560402 0.7363781816579816 1.0109185518016761 1.0 16.542949294256037 -5.651141740612435 2.7873481309913766 0.8803696204604273 1.0657623393881162 0.4350156639844355 0.08424847025256148 0.22457745656713854 3.5243277049027952 0.026219110003553557 0.03518873463777659 2.2328433712074396e-06 5.651141740612435 0.18539271892768883 FVLMAT(ph)PNLSR ddPTM_KYSE-520_SHP099_60min_R1 3 FVLMATPNLSR 11 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 FVLMAT(1)PNLSR;FVLMAT(1)PNLSR;FVLMAT(1)PNLSR 157.2 0.000135 169732000.0 389140.0 445720.0 363469.0 316403.0 327831.0 406680.0 295292.0 423500.0 448290.0 456650.0 True False 367553.628468642 424306.94216064067 386898.7933109623 346473.8459899694 353629.43459676555 404141.75926971383 325142.9971321979 422030.9773456435 366891.83647126396 452604.43626832444 0.8120857839995619 0.9374785312733707 0.8548276647504869 0.7655113786480077 0.7813211852548392 0.8929248740949598 0.7183822584969944 0.9324499353679432 0.8106235977186795 1.0 18.787891199896556 -9.21571852148525 0.855781352380903 1.004872087645759 0.8330117410019463 0.3473705956401171 0.06806123849402856 12.708823642569088 7.627537226944301 0.28732617939009736 0.02200294880354539 6.085292784992477e-10 9.21571852148525 -0.17186034664381278 FVLSSGK ddPTM_KYSE-520_SHP099_60min_R1 2 FVLSSGK 7 0 P27797;K7EJB9 P27797 CALR Calreticulin 0 ; 149.4 0.010343000000000001 1792270000.0 4607300.0 5828000.0 3677600.0 3215800.0 5313100.0 5559600.0 4217400.0 4937700.0 4808600.0 5051000.0 False True 4351723.88457515 5548014.131993661 3914663.980368046 3521428.665134473 5731210.742596264 5524900.474171087 4643735.949857536 4920572.271167845 3935479.454941487 5006252.069618541 0.8692578448025963 1.1082170963110134 0.7819550286181115 0.7034061841402232 1.1448106613283182 1.1036001378556366 0.9275873218687872 0.9828854405932412 0.7861129244419682 1.0 22.255299503265555 -3.9659862648585404 18.447173809286827 0.9481601559292536 0.5347066948146779 0.026769075344641458 0.14372043911493565 5731.13822238837 88951.66231348387 0.03602169931627877 83775.93023869423 0.0001081468153627935 3.9659862648585404 -0.4134534611145757 FVMQEEFSR ddPTM_KYSE-520_SHP099_60min_R1 4 FVMQEEFSR 9 0 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ;;; 190.62 3.6380999999999996e-05 1616520000.0 1165680.0 1308060.0 893730.0 799620.0 1123920.0 1217900.0 900530.0 1006030.0 1117480.0 1192830.0 False True 1101017.4066745306 1245218.8341619098 951341.2658185587 875615.6443854801 1212366.1097699616 1210298.6343429326 991564.3607258534 1002540.3167391664 914573.8013783663 1182262.4542076983 0.9312800239540596 1.0532507648620222 0.8046785740617187 0.7406271266326225 1.0254627519085324 1.0237140070171837 0.838700710825125 0.8479845682074256 0.7735793335256295 1.0 20.17311890886068 FVNDYDKDNDGR ddPTM_KYSE-520_SHP099_60min_R1 2 FVNDYDKDNDGR 12 1 Q14257;Q14257-2;A8MXP8 Q14257 RCN2 Reticulocalbin-2 0 ; 95.631 0.00223 1110560000.0 1218950.0 1054180.0 700390.0 738680.0 1055480.0 1226300.0 983740.0 1006020.0 1018870.0 1050660.0 False True 1151332.4135834195 1003535.6104435612 745538.2600636219 808883.92510776 1138540.2711402941 1218646.2068271122 1083186.0395771933 1002530.351426833 833868.8916225586 1041351.9698011102 1.1056131327079688 0.9636853240266385 0.7159330194631636 0.7767632352606489 1.0933289648049986 1.1702539027797334 1.0401728435622712 0.9627199837325973 0.8007560515603775 1.0 19.990026341384176 -4.2743656647845905 5.792118016451907 0.9474083491013472 1.1094616424115205 0.10860727081975385 0.13670514559524538 0.3377053902597093 47.926582871777484 0.03834847994149884 0.20847606105318564 5.316604263555888e-05 4.2743656647845905 0.16205329331017326 FVQKPYS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 FVQKPYSR 8 1 A0A2R8YFA1;A0A2U3TZL3;Q9Y5P4;Q9Y5P4-3 A0A2R8YFA1 COL4A3BP Collagen type IV alpha-3-binding protein 1 FVQKPYS(1)R;FVQKPYS(1)R 83.499 0.010951 1042800000.0 913770.0 695440.0 649400.0 665860.0 685020.0 717680.0 737290.0 743300.0 875090.0 768880.0 True False 863081.3565446654 662030.0185232784 691261.3630767374 729143.1342018918 738927.1767693606 713200.6929101216 811822.46845698 740721.6657875238 716195.7152237128 762068.3213795883 1.1325511536579962 0.868727907918796 0.907085813284211 0.9567949667319967 0.9696337664734116 0.9358750034629433 1.0652883024809647 0.9719885278088712 0.9398051265628896 1.0 19.53956081926433 FVSEDDRNS(ph)FTLK ddPTM_KYSE-520_SHP099_60min_R1 5 FVSEDDRNSFTLK 13 1 P34932;A0A087WYC1 P34932 HSPA4 Heat shock 70 kDa protein 4 1 FVSEDDRNS(0.995)FT(0.005)LK;FVSEDDRNS(0.999)FT(0.001)LK;FVSEDDRNS(1)FTLK;FVSEDDRNS(0.999)FT(0.001)LK;FVSEDDRNS(0.997)FT(0.003)LK 211.57 2.3603e-11 7164920000.0 6313850.0 5520100.0 5640100.0 5062690.0 5398730.0 4853810.0 5107030.0 5504930.0 6526930.0 5242760.0 True False 5963608.15415207 5254906.110160971 6003669.870479073 5543846.535446745 5823579.33642821 4823515.571360596 5623298.432209639 5485834.682690317 5341804.0425157575 5196313.225205553 1.1476614083278565 1.0112758570193967 1.1553710506436192 1.066880747017987 1.120713683728687 0.9282572782493862 1.082170798506319 1.0557167062371056 1.0279988543809249 1.0 22.30905696601276 -6.156621146529227 21.338368745499167 1.0260288748237982 1.0966253148333065 0.3591192286639576 0.0539265816860931 13.046073687802277 2645.3339734733104 0.016982043273569458 0.016982118337101025 6.972344760610328e-07 6.156621146529227 0.07059644000950827 FVSELWK ddPTM_KYSE-520_SHP099_60min_R1 4 FVSELWK 7 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ;;; 137.77 0.014455 3331578000.0 1525350.0 1510520.0 955820.0 1060990.0 1643850.0 1550650.0 1300310.0 1429540.0 1113610.0 1256550.0 False True 1440735.7947901625 1437952.3518632553 1017433.6865660729 1161826.1706017244 1773211.642772931 1540971.8181655877 1431758.0246026616 1424581.2593971444 911406.4958236063 1245417.9445811065 1.1568291600895078 1.1545942132276785 0.8169415664781386 0.9328805447656384 1.4237884161604453 1.2373130039361124 1.1496205196274334 1.1438579840571503 0.73180774356849 1.0 20.248198540846204 -7.744767653745662 24.97008915715974 0.8659038819297195 1.1254205253228455 0.28578129112181316 0.16507605019202906 285.2604848521295 427252.9247339751 0.1210484583290213 0.045475405233932016 1.7998335631946825e-08 7.744767653745662 0.2595166433931261 FVSFLGR ddPTM_KYSE-520_SHP099_60min_R1 2 FVSFLGR 7 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 0 ; 125.08 0.017308 161830000.0 386030.0 401160.0 352840.0 319040.0 493980.0 420660.0 341120.0 369930.0 388370.0 321080.0 False True 364616.1463682738 381887.67144656356 375584.63096396066 349361.4656771266 532853.4156382717 418034.50490409555 375603.738610377 368646.7991723114 317851.7980109857 318235.4809964599 1.14574322519471 1.200016007802762 1.1802097924088444 1.0978080275122213 1.6743997682778786 1.313601184868339 1.1802698348854297 1.1584088550340252 0.9987943425281405 1.0 18.27973516932629 -7.511897034203811 1.7882887430713879 0.9927365330442883 1.266953549663471 0.31348153196145023 0.15144472146425977 0.4867394299380928 2.7852788850182137 0.14217074761264484 0.04661449767198278 3.0768262053282984e-08 7.511897034203811 0.27421701661918263 FVSRPPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 FVSRPPTPK 9 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 FVSRPPT(1)PK;FVSRPPT(1)PK 103.46 0.0062845 2979350000.0 1913030.0 1817430.0 1502060.0 1330990.0 1329540.0 1774770.0 1490390.0 1596130.0 1991090.0 1788200.0 True False 1806910.4123692398 1730117.9347819553 1598885.1909809727 1457486.889423264 1434167.2339521993 1763693.0021124932 1641053.1660046903 1590593.3975695414 1629558.2472943186 1772357.93919855 1.0194952003805249 0.9761673398570407 0.9021231860783039 0.8223434201346095 0.8091860014465935 0.9951110682021854 0.9259152057889418 0.89744478944744 0.9194295414340488 1.0 20.757238564277095 -9.453504407976126 14.290285947657068 1.0000009068478894 0.9155864196842406 0.12437072339607791 0.06437265653801527 0.0 0.0 0.06752455155610851 0.016377109316958873 3.5196185018532554e-10 9.453504407976126 -0.08441448716364885 FVSSFS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 5 FVSSFSR 7 0 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 FVSSFS(1)R;FVSSFS(1)R;FVSSFS(1)R;FVSSFS(1)R;FVSSFS(1)R 127.68 0.0021706 903470000.0 869860.0 684992.0 714310.0 662878.0 645506.0 606752.0 654018.0 743042.0 728740.0 790390.0 True False 821607.1317770797 652083.956126047 760355.565536409 725877.7258184617 696303.6497732672 602965.0357047733 720132.522040576 740464.5607293067 596419.186040441 783387.7595141159 1.0487872982425317 0.8323897689319169 0.9705992419488502 0.9265880363878498 0.8888365197397758 0.7696891205943185 0.9192542432463165 0.9452082340277672 0.76133329733204 1.0 19.579367060695542 -4.2479355180010545 24.091913218780984 0.8894334632339548 1.0487874746139427 0.2793545720704892 0.07628637676037588 1820.8199484007996 3248388.877126925 0.018381807793990037 0.33812836658212303 5.6502086022050975e-05 4.2479355180010545 0.15935401137998795 FWEGDFHR ddPTM_KYSE-520_SHP099_60min_R1 3 FWEGDFHR 8 0 B4DKY1;P49589-2;P49589;P49589-3 B4DKY1 CARS Cysteine--tRNA ligase, cytoplasmic 0 ;; 140.5 0.001048 2067610000.0 2073720.0 1869600.0 1372270.0 1216520.0 2181160.0 1872330.0 1468540.0 1476510.0 1532510.0 1601480.0 False True 1958686.6177416695 1779781.6096731855 1460728.719909632 1332137.6950399259 2352804.8828972285 1860644.0939644503 1616994.3547692378 1471388.3314300235 1254244.8154332608 1587292.133132585 1.233979918917712 1.1212690925146303 0.9202645747552626 0.8392517465646971 1.4822759048480088 1.17221276104506 1.0187125110851738 0.9269801700120439 0.7901789401286567 1.0 20.59813624269927 -7.110622238615922 2.9257227813052755 0.8915061516676639 1.120133140463253 0.25369141037112986 0.17018653638684733 0.41955720351444414 6.854576225590742 0.09916576231345518 0.05222611601418299 7.751357392153527e-08 7.110622238615922 0.22862698879558918 FWEVISDEHGIDPTGTYHGDSDLQLDR ddPTM_KYSE-520_SHP099_60min_R1 10 FWEVISDEHGIDPTGTYHGDSDLQLDR 27 0 Q5JP53;P07437 Q5JP53 TUBB Tubulin beta chain 0 ;;;;;;;;; 292.75 5.2406e-52 11961569000.0 2878824.0 4121779.0 2534374.0 4256663.0 3286972.0 3165565.0 2591076.0 2087533.0 2369831.0 2606457.0 False True 2719129.893926634 3923762.5499235867 2697743.803181777 4661214.971707605 3545637.996087615 3145807.534628286 2853007.2485448597 2080291.8352568662 1939529.4289779644 2583365.8187728594 1.0525531746867598 1.518856726140101 1.0442747920475501 1.8043185900484497 1.3724877716977189 1.2177166360908946 1.1043760151243638 0.8052641326055163 0.7507761443941657 1.0 21.300820520778732 -6.904294949159798 1.8725019726095973 0.8325887886647505 1.3671974241007379 0.504157034361208 0.21575858811361814 0.2738151507668457 1.9313217334526498 0.12070683185781787 0.06714130077677274 1.2465366469000336e-07 6.904294949159798 0.5346086354359874 FWEVISDEHGIDPTGTYHGDSDLQLER ddPTM_KYSE-520_SHP099_60min_R1 6 FWEVISDEHGIDPTGTYHGDSDLQLER 27 0 P04350;M0R278;M0R2D3;M0QZL7;M0QY85;M0QYM7;M0QY37;M0QX14;M0R0X0;P68371 P04350;P68371 TUBB4A;TUBB4B Tubulin beta-4A chain;Tubulin beta-4B chain 0 ;;;;; 302.57 1.3394e-52 5448010000.0 1621020.0 2331940.0 1560763.0 2869430.0 1893850.0 1881450.0 1462730.0 1302215.0 1225680.0 1459280.0 False True 1531098.7891767435 2219910.102086697 1661372.2802890937 3142139.764474416 2042885.2204675106 1869707.1726615608 1610597.0232691052 1297697.9201042654 1003127.4088784015 1446351.9145026596 1.0585935371774475 1.5348340053534149 1.1486639341576637 2.1724586754910664 1.4124399463113886 1.2927055676518917 1.1135581922487534 0.8972214210747527 0.6935569406172739 1.0 20.463987189066486 -6.859297507031843 1.6993626516682159 0.8418299221719844 1.4828083144885549 0.4533824188763267 0.2881777207728206 0.3386699465396408 1.9750144952494701 0.17015204575966092 0.09584690793223222 1.382618911783629e-07 6.859297507031843 0.6409783923165705 FWIQDK ddPTM_KYSE-520_SHP099_60min_R1 1 FWIQDK 6 0 G3V1D3;G3V180;Q9NY33-4;Q9NY33 G3V1D3 DPP3 Dipeptidyl peptidase 3 0 114.02 0.065553 465250000.0 690310.0 638630.0 428980.0 370880.0 660500.0 699510.0 494720.0 510940.0 473670.0 521250.0 False True 652017.128201132 607949.2561968269 456632.737192268 406128.32369086234 712477.5922690767 695144.0986199396 544731.1256019159 509167.66839429195 387663.46824899863 516632.1305263636 1.2620529960783378 1.1767546388905896 0.8838643789480031 0.786107366719689 1.379081071754439 1.3455301316851926 1.0543887873309854 0.9855516881529095 0.750366547767815 1.0 18.978777845166377 -7.352699911305247 2.9294009288744043 0.8771849591683919 1.1263288674463905 0.23190608834264603 0.18567249908284303 0.45078177038717887 7.382652391687279 0.13484029931246044 0.056013749496028616 4.4391527444912304e-08 7.352699911305247 0.2491439082779986 FWTHWNR ddPTM_KYSE-520_SHP099_60min_R1 2 FWTHWNR 7 0 Q15428 Q15428 SF3A2 Splicing factor 3A subunit 2 0 ; 138.85 0.0030528 575840000.0 373020.0 505040.0 403060.0 349010.0 624240.0 473040.0 393590.0 318380.0 315570.0 291730.0 False True 352327.83700306516 480777.12031950505 429041.89251880173 382179.8054663171 673364.1365602548 470087.5818947218 433377.91826822853 317275.6140904503 258270.44287232996 289145.4991625054 1.2185139939012162 1.6627515272139823 1.4838269790174803 1.3217560244696205 2.3288072562451028 1.6257821175024532 1.4988229784779106 1.097287057932502 0.8932196545351617 1.0 18.1414361197487 -7.275878879212132 2.583187698621124 0.9524343928378375 1.6210495973180727 0.49447003216387797 0.27949896747163516 0.2567808110309563 3.329535007776515 0.18893879844065214 0.08198092193032572 5.29811182817696e-08 7.275878879212132 0.6686152044802353 FWY(ph)SLLK ddPTM_KYSE-520_SHP099_60min_R1 1 FWYSLLK 7 0 Q5JXM2 Q5JXM2 METTL24 Methyltransferase-like protein 24 1 FWY(0.893)S(0.107)LLK 57.103 0.053136 0.0 21192.0 24330.0 22788.0 13992.0 17630.0 21461.0 16950.0 24651.0 26909.0 28058.0 True False 20016.437514795347 23161.150279925456 24256.95094208916 15321.795473151808 19017.38069902167 21327.05393844625 18663.471416058554 24565.491434586645 22023.00392068805 27809.42794879367 0.7197716382966314 0.8328524528650059 0.8722563796261544 0.5509568733799303 0.6838465262226515 0.7669001310532669 0.6711202923851638 0.8833511958541477 0.7919258159944773 1.0 14.763286447717444 -8.108529181467098 0.9707310603381267 0.9956040963657804 0.7327295964068136 0.4239927612523334 0.09227282778694165 0.6985168793622026 1.4336515186875476 0.09214881896033694 0.030884644648354668 7.788804776265318e-09 8.108529181467098 -0.26287449995896683 FY(ph)WMHS(ph)KLPEEEGLGEK ddPTM_KYSE-520_SHP099_60min_R1 1 FYWMHSKLPEEEGLGEK 17 1 H3BUB4;O95149 H3BUB4 SNUPN Snurportin-1 2 FY(1)WMHS(1)KLPEEEGLGEK 52.03 0.039885000000000004 45261000.0 33719.0 37389.0 25950.0 27465.0 27020.0 41483.0 25159.0 34538.0 42686.0 35684.0 True False 31848.539852839956 35592.77631796684 27622.778521468026 30075.265342346665 29146.320277230046 41224.08920966247 27702.317248177984 34418.19573922978 34935.29842649261 35367.86752173189 0.9004936425208709 1.0063591279880462 0.7810134016277664 0.8503556320964738 0.8240904052052617 1.1655802879359973 0.7832622996327447 0.9731487406777187 0.9877694323817097 1.0 15.110151615026833 FYAFGR ddPTM_KYSE-520_SHP099_60min_R1 2 FYAFGR 6 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 138.97 0.052327 6101000000.0 2390910.0 2202320.0 1584750.0 1402490.0 2092500.0 2212900.0 1661660.0 1533560.0 1565420.0 1694620.0 False True 2258281.4561390793 2096517.2414502858 1686905.52068965 1535782.2279260051 2257167.8453036225 2199088.4702664223 1829636.809038812 1528240.4382955942 1281179.1890268507 1679606.9851944102 1.3445296882220867 1.2482189345072408 1.0043453829137268 0.9143699933757077 1.343866669524693 1.3092875235999828 1.0893243628818539 0.9098797824532173 0.7627851040870478 1.0 20.679692262540904 -7.1921700702259175 3.293162739276413 0.8709705250990376 1.1825551805483525 0.46727913075859084 0.14378379941238104 0.24397398425646036 5.1729855675723 0.08569185969014881 0.04368067713168759 6.424360893290501e-08 7.1921700702259175 0.3115846554493149 FYCDYCDTYLTHDS(ph)PSVR ddPTM_KYSE-520_SHP099_60min_R1 2 FYCDYCDTYLTHDSPSVR 18 0 A0A0A0MRR7;P09234 A0A0A0MRR7 SNRPC U1 small nuclear ribonucleoprotein C 1 FYCDYCDTYLTHDS(0.999)PS(0.001)VR;FYCDYCDTYLTHDS(1)PSVR 191.65 1.0552e-12 3598650000.0 1585890.0 1624090.0 1523430.0 1617370.0 1334390.0 1387570.0 1315380.0 1362830.0 1828680.0 1450470.0 True False 1497917.5203066636 1546066.27859121 1621632.7353741818 1771084.358519979 1439398.9013594757 1378909.660937042 1448351.4472716881 1358102.6608169118 1496637.809271389 1437619.9642485853 1.0419426256991322 1.0754346190505968 1.1279982023773412 1.2319558732934603 1.0012374182017014 0.9591614579850176 1.0074647565350916 0.9446882309587044 1.041052466222289 1.0 20.455250918150025 -5.9441431745873174 16.3930885812992 0.9872029440442939 1.1168051327252577 0.5915394047857444 0.0517385720971515 2.5217392946122477 739.2907061004129 0.016567786784845606 0.018786394328339624 1.1372523041495745e-06 5.9441431745873174 0.12960218868096385 FYEAFSK ddPTM_KYSE-520_SHP099_60min_R1 3 FYEAFSK 7 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;; 170.06 0.0047677 9793780000.0 10568370.0 10633650.0 7763830.0 6993440.0 10425920.0 10671370.0 8551230.0 8561000.0 8997290.0 8512690.0 False True 9982121.448576715 10122793.49256594 8264298.904367206 7658094.43494559 11246380.58862984 10604766.02148628 9415671.780362386 8531303.88915242 7363608.939223579 8437274.189372594 1.1830979087001792 1.1997705971575974 0.9794986768092396 0.9076502983145385 1.3329400391889048 1.2568947960520014 1.115961336449414 1.011144558973592 0.8727473795385979 1.0 23.008345555384576 -7.377302349530423 3.1582449093006684 0.9378644222857414 1.1392797016545406 0.32506658707774794 0.12048458688330568 0.3457076112580144 6.437051531254305 0.08657841090542955 0.0359410095379399 4.1946685556337083e-08 7.377302349530423 0.20141527936879922 FYEEEENGGVWEGFGDFSPTDVHR ddPTM_KYSE-520_SHP099_60min_R1 2 FYEEEENGGVWEGFGDFSPTDVHR 24 0 P19838-3;P19838;P19838-2;D6RF93;A0A494C1E9 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 0 ; 222.24 5.315199999999999e-21 124900000.0 137858.0 134142.0 73134.0 143135.0 112114.0 92190.0 98099.0 112028.0 85207.0 86891.0 False True 130210.74192689033 127697.61696875314 77848.33465853725 156738.50736489292 120936.7339585999 91614.60801385577 108015.80427397793 111639.40101553185 69735.5566936737 86121.2133401751 1.5119473690246732 1.4827661155254863 0.9039391299683582 1.819975605148322 1.4042618452309186 1.063786777503726 1.2542299403901815 1.2963054825361204 0.8097372759742857 1.0 16.394081024966376 -7.16060150261699 0.7847273634801756 0.947223252754022 1.4084011223495163 0.32382791953180257 0.2445101831276236 0.8383894803453292 0.960857756190471 0.22308604732175943 0.10623426955809911 6.908734406902423e-08 7.16060150261699 0.46117786959549434 FYEEVHDLER ddPTM_KYSE-520_SHP099_60min_R1 12 FYEEVHDLER 10 0 P55209;P55209-2;H0YIV4;F5H4R6;F8VY35;F8W118;F8VV59;H0YH88;F8W0J6;F8W543;F8W020;H0YHC3;F8VRJ2;B7Z9C2;F8VXI6;F8VUX1;P55209-3;F8VVB5;Q99733;Q99733-2;E9PNJ7;C9J6D1;C9JZI7;E9PS34;A8MXH2;E9PKT8;E9PNW0;E9PJJ2 P55209;Q99733 NAP1L1;NAP1L4 Nucleosome assembly protein 1-like 1;Nucleosome assembly protein 1-like 4 0 ;;;;;;;;;;; 215.83 7.1283999999999995e-09 20820730000.0 16564810.0 14558890.0 10361120.0 8839040.0 15367730.0 14692680.0 11720460.0 11690950.0 11916840.0 12659260.0 False True 15645926.968169933 13859459.07106057 11029014.373578155 9679099.704045726 16577082.92057721 14600977.534147099 12905278.47746651 11650396.823138248 9753042.25508983 12547108.805155259 1.246974678480628 1.1045938380135911 0.8790084269490546 0.7714207196536665 1.3211874686036154 1.1636925893356374 1.0285459923774702 0.9285323817668197 0.7773139140295473 1.0 23.580851630539243 -7.270807478254418 3.346942255264161 0.8815980388023935 1.0708441788871261 0.19830295368185447 0.16001838576443392 0.44104990003528755 10.389976555305271 0.10140950845733984 0.04752284934098178 5.360342275933091e-08 7.270807478254418 0.18924614008473262 FYEQFSK ddPTM_KYSE-520_SHP099_60min_R1 4 FYEQFSK 7 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;;; 159.04 0.0079734 12492610000.0 8229900.0 8271450.0 5831890.0 5691290.0 8413590.0 7817390.0 6348420.0 6858200.0 6794560.0 6826870.0 False True 7773371.041101096 7874077.126300436 6207822.960753924 6232188.490451274 9075691.666221308 7768598.76929642 6990180.248208517 6834410.504915906 5560839.1809190335 6766389.243024489 1.1488211455045556 1.1637044283873959 0.9174498743408246 0.9210508391718781 1.3412902125867932 1.148115854745589 1.0330739183257505 1.010052815386218 0.8218325876909514 1.0 22.689954741257836 -7.33510856289156 2.3511890637022113 0.9157018718270241 1.1002046485303725 0.2627265390919239 0.12377861453642042 0.4631068978380061 4.835992712949705 0.09420982632406161 0.03738707892851037 4.6226545201203066e-08 7.33510856289156 0.18450277670334836 FYGDEEK ddPTM_KYSE-520_SHP099_60min_R1 4 FYGDEEK 7 0 P27797;K7EJB9 P27797 CALR Calreticulin 0 ;;; 143.23 0.011848000000000001 1713390000.0 2126870.0 2112630.0 1578330.0 1422160.0 2184050.0 2255390.0 1881200.0 2047840.0 1852190.0 1925360.0 False True 2008888.2812897696 2011136.0836777212 1680071.6772172893 1557321.6588120065 2355922.3094553766 2241313.2744155605 2071370.054742732 2040736.5210094515 1515878.985910259 1908302.8083074125 1.052709387914999 1.0538872944705864 0.8804009876752448 0.816076805018847 1.234564189288693 1.1745060923551829 1.085451452319537 1.0693986887854041 0.7943597731508776 1.0 20.86385868478776 FYGDEEKDK ddPTM_KYSE-520_SHP099_60min_R1 11 FYGDEEKDK 9 1 P27797;K7EJB9 P27797 CALR Calreticulin 0 ;;;;;;;;;; 184.04 0.00011902 97075600000.0 114363700.0 119037700.0 67624250.0 69407290.0 121711700.0 123866700.0 94947370.0 110692470.0 111663100.0 111912700.0 False True 108019717.58261606 113318950.21276964 71983417.35762557 76003737.9735373 131289718.34515683 123093601.9792806 104545576.7566332 110308503.65738684 91387895.83768187 110921240.54476312 0.9738415929366014 1.0216163257481683 0.6489597213671273 0.6852045433341994 1.1836300937526376 1.109738778386681 0.9425208034383914 0.9944759282859895 0.8238989700155903 1.0 26.72496041580142 -5.756409753146151 24.999684877907345 1.010476457395308 0.8328173615618917 0.28186139195784243 0.13811454586474975 186.65809057317642 927775.6475536725 0.04502705699474593 0.05632394115403935 1.7522265109064525e-06 5.756409753146151 -0.17765909583341633 FYHDAK ddPTM_KYSE-520_SHP099_60min_R1 1 FYHDAK 6 0 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 124.12 0.013262999999999999 493630000.0 1882800.0 1742100.0 1550900.0 1029500.0 1578200.0 1909600.0 1209900.0 1388900.0 1459700.0 1546500.0 False True 1778357.3307312531 1658406.9010545893 1650873.4955277357 1127343.3704695397 1702395.3612703334 1897681.4780698472 1332208.4994860892 1384082.230071697 1194655.2760425273 1532799.2131587926 1.1602024032008826 1.081946602540945 1.0770317999613372 0.7354801338567434 1.1106447254510505 1.2380496165307295 0.8691343837140116 0.9029768662389774 0.7793944998057389 1.0 20.547737294923614 -6.8411402475512055 24.99999285879476 0.8797884357678083 1.0552451107369847 0.30165173200233153 0.13271069389982684 44.11655529170307 13835.23849544086 0.05811655244815231 0.0391821809277029 1.441649721631904e-07 6.8411402475512055 0.17545667496917638 FYHDWNDK ddPTM_KYSE-520_SHP099_60min_R1 4 FYHDWNDK 8 0 J3KQ32;Q9NTK5;Q9NTK5-2;Q9NTK5-3;C9JCJ9 J3KQ32 OLA1 Obg-like ATPase 1 0 ;;; 170.22 0.00022168 3022380000.0 6939460.0 6227060.0 3859000.0 4019890.0 6262360.0 6871740.0 5562030.0 5946920.0 4477240.0 5279750.0 False True 6554514.320329459 5927902.690592376 4107757.314618312 4401939.136976002 6755172.104045685 6828850.921717475 6124294.272581715 5926291.522541558 3664286.078035649 5232975.52258335 1.2525406037239992 1.1327977104058693 0.7849754497973356 0.841192380506857 1.2908854770852964 1.3049651947055725 1.170327330244868 1.1324898228486153 0.7002299288850314 1.0 22.31920008003866 -7.742935323529635 24.995326084248802 0.8501149437846933 1.1085222255448346 0.2583555429586253 0.1785076981213378 318.9357921461472 430822.65764716535 0.13300129665662971 0.05006877855473669 1.8074432759824204e-08 7.742935323529635 0.25840728176014127 FYHDWNDKEIEVLNK ddPTM_KYSE-520_SHP099_60min_R1 5 FYHDWNDKEIEVLNK 15 1 J3KQ32;Q9NTK5;Q9NTK5-2;Q9NTK5-3;C9JCJ9 J3KQ32 OLA1 Obg-like ATPase 1 0 ;;;; 275.76 1.5424000000000002e-25 5313460000.0 6820740.0 6199960.0 4120490.0 3600230.0 5949240.0 5905740.0 4652360.0 4772810.0 4505890.0 4306550.0 False True 6442379.955391904 5902104.615270308 4386103.378417101 3942394.776751382 6417411.341454773 5868880.08603698 5122665.951458061 4756254.23609223 3687733.9602433825 4268397.317445197 1.5093205895012418 1.3827448984535837 1.0275761725579837 0.9236241342010446 1.5034709433506637 1.374961056706346 1.2001380308532705 1.1142951047816314 0.863962205479652 1.0 22.025263042869106 -7.452343616841094 2.423350578787175 0.9359338093322577 1.2706628460176945 0.36148393148311564 0.18171872734559544 0.3811034948998646 4.181469662479253 0.15343351743074557 0.05480002193144334 3.52903839308774e-08 7.452343616841094 0.33472903668543685 FYMYELLK ddPTM_KYSE-520_SHP099_60min_R1 2 FYMYELLK 8 0 P19784 P19784 CSNK2A2 Casein kinase II subunit alpha 0 ; 135.16 0.0090375 0.0 212156.0 238896.0 139976.0 147462.0 204941.0 189852.0 138958.0 135973.0 147353.0 125594.0 False True 200387.283757499 227419.07756979347 148999.07692951863 161476.744143933 221068.69074521837 188667.0632459765 153005.23073939013 135501.3413993367 120597.40966684553 124481.33487065339 1.6097777547591237 1.8269331527180448 1.196959183353402 1.2971964376162979 1.7759183814579704 1.5156253219972093 1.2291419504649068 1.0885273807525766 0.9687991359681065 1.0 16.92556991063951 -6.983892001135782 2.1997249084420867 1.0130337582884825 1.5369510006582143 0.6284299985808837 0.18090628796789143 0.23177880226992026 2.232615017714865 0.10905896224668223 0.05927409817009057 1.0377864569137827e-07 6.983892001135782 0.5239172423697318 FYQGLPWGVSS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 1 FYQGLPWGVSSLPR 14 0 Q5JTC6 Q5JTC6 AMER1 APC membrane recruitment protein 1 1 FYQGLPWGVS(0.046)S(0.954)LPR 113.59 0.00014963 119280000.0 129280.0 138180.0 150010.0 111750.0 154210.0 105510.0 130720.0 121410.0 152770.0 123540.0 True False 122108.58068670932 131541.62538759137 159679.88462448627 122370.6864011374 166345.44966512365 104851.47295305275 143934.4533042581 120988.85704730717 125030.81901830292 122445.53171266569 0.997248155802475 1.0742868567574262 1.304089111223722 0.9993887460776933 1.3585260918746698 0.8563111408515938 1.1754978012755821 0.9881034885880786 1.0211137741775989 1.0 16.901780602413037 -6.277363862520659 24.97006898014512 1.0179175178015847 1.1432434448227946 0.21697601679560752 0.13082434382314215 1403.5954454471319 2200873.2922989978 0.044009671132858814 0.03893753096002375 5.28002692859961e-07 6.277363862520659 0.12532592702120993 FYS(ph)TSLK ddPTM_KYSE-520_SHP099_60min_R1 1 FYSTSLK 7 0 A0A0C4DH43 A0A0C4DH43 1 FYS(0.333)T(0.333)S(0.333)LK 65.676 0.067316 0.0 76956.0 207800.0 355740.0 16497.0 49794.0 170980.0 30491.0 28981.0 29657.0 180920.0 True False 72687.0972720174 197816.97608584084 378671.56960412447 18064.869919996097 53712.504510895335 169912.85039818933 33573.32784348324 28880.471675216246 24272.03639213073 179317.18955362993 0.40535487675752496 1.1031679482500367 2.111741604621078 0.10074254434259512 0.29953907176774636 0.9475547259085947 0.18722871982912814 0.16105802096891952 0.1353581129201865 1.0 17.452154267691036 -5.297711910737696 24.999855229130574 0.37874262715897855 1.1963971207522692 0.35859529463734086 0.4907811649661232 606.2688567400271 417853.06248149916 0.13946757636596352 0.20687100393614008 5.038347167403135e-06 5.297711910737696 0.8176544935932907 FYWGHK ddPTM_KYSE-520_SHP099_60min_R1 2 FYWGHK 6 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 0 ; 118.11 0.014131 3496900000.0 2401450.0 1857300.0 1400290.0 1344840.0 2193830.0 2015810.0 1537460.0 1493060.0 1595010.0 1365380.0 False True 2268236.7813281114 1768072.520135864 1490554.933943218 1472653.189259109 2366471.9398147897 2003228.5820632493 1692881.4609636224 1487880.9233428226 1305396.3909300475 1353283.7954495654 1.6760983830258571 1.3065053509700117 1.1014355887177758 1.0882072143410901 1.7486885956752625 1.480272348489749 1.2509434212217412 1.0994596464879294 0.9646139230510703 1.0 20.368032986136154 -7.243004247593891 2.3586131712723177 0.9959847322259519 1.3822437454627676 0.4140175209647937 0.2020456887112019 0.3582638917054725 3.824774287137568 0.1444945492871271 0.06307789440414933 5.714730473830396e-08 7.243004247593891 0.3862590132368158 GAADEVEVEPPEPPGPVAS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 GAADEVEVEPPEPPGPVASR 20 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 GAADEVEVEPPEPPGPVAS(1)R 151.95 1.2552e-07 0.0 132170.0 123570.0 92890.0 85599.0 93023.0 98320.0 90148.0 106750.0 116850.0 97705.0 True False 124838.26662563722 117633.51171764845 98877.83802925497 93734.30322372212 100343.38087153106 97706.34841004777 99261.03959969588 106379.70916563743 95632.98554879022 96839.40971333976 1.2891266788508788 1.2147276823130435 1.02104957394876 0.9679355078804254 1.036183318016535 1.008952333551746 1.02500665683036 1.0985167038970858 0.9875420124087834 1.0 16.563306664935112 -4.682122581209683 3.5866484212925336 1.019552520009017 1.2740944113888812 0.8882210659514074 0.03358738520134044 0.06782953352329865 1.6709994694116583 0.009081746920524936 0.027502403796970436 2.0791097679233335e-05 4.682122581209683 0.25454189137986427 GAAEEAELEDS(ph)DDEEKPVKQDDFPK ddPTM_KYSE-520_SHP099_60min_R1 10 GAAEEAELEDSDDEEKPVKQDDFPK 25 2 Q9UBB9;F6XM96 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK;GAAEEAELEDS(1)DDEEKPVKQDDFPK 272.57 3.1664999999999993e-38 18998820000.0 11427360.0 10642020.0 10808080.0 10292950.0 11015330.0 10424140.0 10275950.0 10220020.0 13061920.0 10662130.0 True False 10793461.560922608 10130761.385202313 11504786.130339446 11271188.873311734 11882173.802345697 10359079.07562161 11314743.309607485 10184569.135990601 10690204.592207568 10567671.82321161 1.0213660815256447 0.9586559418840359 1.088677461110165 1.066572567909884 1.1243889856843223 0.980261239080889 1.070694046796093 0.9637476736948308 1.0115950581212048 1.0 23.333154234018618 -9.541953973788496 7.11442327958139 1.0000000014373556 1.0326727965759452 0.031522025779705753 0.05262265987599677 0.0 0.0 0.05227673621412206 0.0126789708925516 2.8710848413730907e-10 9.541953973788496 0.03267279513858967 GAAEEEQQDS(ph)GS(ph)EPRGDEDDIPLGPQSNVSLLDQHQHLK ddPTM_KYSE-520_SHP099_60min_R1 2 GAAEEEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLK 39 1 D6RGI7;A0A499FJW5;Q9UJV9 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 2 GAAEEEQQDS(1)GS(1)EPRGDEDDIPLGPQSNVSLLDQHQHLK;GAAEEEQQDS(1)GS(1)EPRGDEDDIPLGPQSNVSLLDQHQHLK 215.25 2.0694999999999998e-22 745490000.0 143161.0 183648.0 163484.0 225100.0 159696.0 152104.0 135328.0 161567.0 179594.0 135324.0 True False 135219.57394562176 174825.274418732 174022.44022364868 246493.4363212173 172263.16665405352 151154.662515886 149008.27491400435 161006.5617870212 146984.25679631552 134125.13464047897 1.0081598375135012 1.3034490133959555 1.297463303131915 1.8377870559603942 1.284346644764258 1.1269674615503986 1.110964587759181 1.20042050446844 1.0958740670815004 1.0 17.033220093657594 -6.166908105431002 4.559023820146528 1.1198143869901636 1.3740821956015676 0.27212397365196195 0.19603081060125296 0.33212390846884443 11.762336701131632 0.0695552884788202 0.06940134405034902 6.809134213711797e-07 6.166908105431002 0.2542678086114041 GAAGGAST(ph)PTPQHGEEK ddPTM_KYSE-520_SHP099_60min_R1 1 GAAGGASTPTPQHGEEK 17 0 O60299-2;O60299 O60299-2 LZTS3 Leucine zipper putative tumor suppressor 3 1 GAAGGAS(0.218)T(0.765)PT(0.017)PQHGEEK 92.679 0.042938 0.0 303810.0 319410.0 261450.0 244330.0 237180.0 296720.0 251340.0 298230.0 350070.0 289130.0 True False 286957.0536697802 304065.06415581546 278303.4853347904 267551.0497395068 255844.7166304005 294868.0604173046 276747.9000420153 297195.5097374056 286506.1125465556 286568.5331397365 1.0013557682896546 1.0610553113573964 0.9711585647091411 0.9336372239063792 0.892787194139161 1.0289617537090894 0.9657302461295272 1.037083543267073 0.9997821791789314 1.0 18.128520676585396 GAAS(ph)PVLQEDHCDSLPSVLQVEEK ddPTM_KYSE-520_SHP099_60min_R1 4 GAASPVLQEDHCDSLPSVLQVEEK 24 0 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 GAAS(0.998)PVLQEDHCDS(0.002)LPSVLQVEEK;GAAS(1)PVLQEDHCDSLPSVLQVEEK;GAAS(1)PVLQEDHCDSLPSVLQVEEK;GAAS(1)PVLQEDHCDSLPSVLQVEEK 292.37 1.1849999999999999e-48 1735930000.0 1537070.0 1974450.0 1493020.0 1814290.0 1438760.0 1750410.0 1422840.0 1815410.0 2050450.0 1906050.0 True False 1451805.6630269194 1879594.4582901304 1589262.4581164634 1986719.5761138203 1551982.2265754077 1739485.0419083803 1566674.5527802187 1809112.766429879 1678139.967638145 1889163.8798844602 0.7684911184707335 0.9949345730689519 0.8412517701818761 1.0516396154235843 0.8215180499165196 0.9207697968557211 0.8292952080345911 0.95762616768881 0.8882977202278389 1.0 20.849316426392722 -9.147085564839497 0.9234882590461445 1.0019020157672052 0.8999107398328446 0.12184243267107986 0.08236670655821353 23.333062960730793 16.385894448901798 0.24405971067600757 0.024026803022805836 7.127125974261265e-10 9.147085564839497 -0.10199127593436053 GAASTLVPGVSETSAS(ph)PGSPSVR ddPTM_KYSE-520_SHP099_60min_R1 1 GAASTLVPGVSETSASPGSPSVR 23 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 GAASTLVPGVSETSAS(0.659)PGS(0.336)PS(0.004)VR 296.01 1.8152999999999998e-48 1237000000.0 498970.0 723410.0 525980.0 365230.0 433460.0 583600.0 403460.0 566380.0 628110.0 575890.0 True False 471291.1394279647 688656.2977394529 559885.5123977552 399941.3493895967 467570.8359499678 579957.5359245713 444245.6741901462 564415.3599740863 514061.0573645754 570788.0626356396 0.8256849963745854 1.2065008762789318 0.9808991270988721 0.7006827499910379 0.8191671595073983 1.01606458489442 0.7783023214235102 0.9888352558879262 0.9006163425893585 1.0 19.12259563728754 -5.010574149660842 24.98996018705855 0.8805752441659304 1.0354947023110825 0.15045385090959795 0.12829526367314986 760.8992461653409 1798251.3261705986 0.03306581095533327 0.06251132848738071 9.759461391585858e-06 5.010574149660842 0.15491945814515218 GAASTLVPGVSETSASPGS(ph)PSVR ddPTM_KYSE-520_SHP099_60min_R1 3 GAASTLVPGVSETSASPGSPSVR 23 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 GAASTLVPGVSETSAS(0.334)PGS(0.666)PSVR;GAASTLVPGVSETSAS(0.005)PGS(0.995)PSVR;GAASTLVPGVSETSAS(0.174)PGS(0.826)PSVR 440.13 2.7169999999999997e-131 2139550000.0 1008530.0 1462540.0 939140.0 716230.0 861440.0 1244990.0 780320.0 1042170.0 1223410.0 1193520.0 True False 952584.83044529 1392277.3830827044 999678.4670771277 784300.2838575983 929230.4270768713 1237219.5556044083 859202.3607893109 1038554.9555143068 1001269.583656359 1182946.341344509 0.8052646152678442 1.1769573432217344 0.8450750741076866 0.6630057986959755 0.7855220432236426 1.0458796923943428 0.7263240358077119 0.8779391923507787 0.8464201195451854 1.0 20.173953203583544 -4.94767420663784 24.99893366316896 0.8376540348419795 0.9960879899680833 0.14446510820990877 0.1364387327640999 156.31893708709615 74680.32329627596 0.03449426150681593 0.07180551847237672 1.128043359685731e-05 4.94767420663784 0.1584339551261038 GACGRWRGRSR ddPTM_KYSE-520_SHP099_60min_R1 1 GACGRWRGRSR 11 3 B7ZKR5;Q3MIM8;P13497-3;P13497-4;P13497-5;P13497-2;P13497-6;P13497 B7ZKR5 BMP1 Metalloendopeptidase;Bone morphogenetic protein 1 0 40.986999999999995 0.06702799999999999 0.0 375430.0 406460.0 302120.0 258150.0 304740.0 429050.0 316800.0 372660.0 461000.0 418420.0 False True 354604.1494988499 386933.05149110145 321595.13860909105 282684.4983843726 328721.30426658364 426372.1398019837 348825.23567005026 371367.32943949796 377294.0208642906 414713.1243258346 0.8550589038514298 0.9330137601024974 0.775464097336881 0.6816386600831835 0.7926474591344538 1.028113447084903 0.8411241776760913 0.8954800503196025 0.9097711134115343 1.0 18.661754179023795 -6.22389019219608 24.92675958860249 0.9225044449429332 0.8057547051287222 0.3993211646153376 0.07732652802747189 670.6537201401147 445208.86488976545 0.027400540412721375 0.027399841140266556 5.97186261153301e-07 6.22389019219608 -0.116749739814211 GACST(ph)PDMPQFEPVK ddPTM_KYSE-520_SHP099_60min_R1 3 GACSTPDMPQFEPVK 15 0 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 GACS(0.359)T(0.641)PDMPQFEPVK;GACS(0.46)T(0.54)PDMPQFEPVK;GACS(0.104)T(0.896)PDMPQFEPVK 168.41 1.7065e-07 2432470000.0 1868870.0 2050180.0 1415170.0 1458770.0 1518680.0 2097290.0 1719020.0 2210990.0 2230010.0 2283370.0 True False 1765200.0556000166 1951686.27541708 1506394.1225520575 1597411.0622048085 1638191.4758928104 2084200.0351597737 1892795.3176184623 2203320.591738947 1825096.3979773894 2263141.118234979 0.7799778994677513 0.8623793981257332 0.6656209418027332 0.7058380272153013 0.7238574133505356 0.9209324236860841 0.8363576192255527 0.9735674783980393 0.806443921358638 1.0 21.109895116028053 -6.262255262463805 24.9932608617535 0.901364343473534 0.7470477416379472 0.5516601046826 0.0719813181842967 60.7524690192588 1861029.4005546325 0.024629819555312918 0.02299966080609651 5.466945413222137e-07 6.262255262463805 -0.15431660183558682 GADDDRPSWR ddPTM_KYSE-520_SHP099_60min_R1 1 GADDDRPSWR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 112.75 0.00070188 757820000.0 1341300.0 1396100.0 903000.0 846690.0 1316100.0 1311200.0 1018400.0 1121500.0 1110600.0 1154200.0 False True 1266895.41518474 1329029.2604111766 961208.8248510839 927159.163033369 1419669.5824153374 1303016.3144350543 1121349.810626196 1117609.778260067 908943.035947681 1143974.6859540122 1.1074505675169015 1.1617645711302074 0.8402360967012906 0.8104717476857183 1.2409973750698957 1.1390254788272784 0.9802225734488623 0.9769532420448988 0.7945482073230251 1.0 20.12562369761821 -7.328745410642931 2.616382346433293 0.8995393102484017 1.0420262725259422 0.1445646929334201 0.13700739400834824 0.6158455315768324 8.08576590275798 0.1001340889846714 0.041249992632771 4.690882875219007e-08 7.328745410642931 0.14248696227754043 GADFLVTEVENGGS(ph)LGSK ddPTM_KYSE-520_SHP099_60min_R1 2 GADFLVTEVENGGSLGSK 18 0 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 GADFLVTEVENGGS(0.996)LGS(0.004)K;GADFLVTEVENGGS(1)LGSK 174.19 1.1837e-08 170009000.0 284336.0 315110.0 259850.0 187357.0 228736.0 286130.0 226983.0 278400.0 281480.0 272530.0 True False 268563.31527023646 299971.642610247 276600.3467747 205163.35294906408 246736.22187018814 284344.1565354654 249928.65678060276 277434.2953790487 230370.32753336328 270115.59622513136 0.9942532716489235 1.1105306276362945 1.0240073162756727 0.7595390855479075 0.9134467810016517 1.0526758192017727 0.9252655539826603 1.0270946929988354 0.8528582975318394 1.0 18.04321741656825 -5.0178611907099775 24.955285131284388 0.9344103809738628 1.0561112373017976 0.26598654097610996 0.08451081843179009 908.8365052750672 1269811.0177588463 0.023037032740482598 0.040991425793096635 9.59707324349555e-06 5.0178611907099775 0.12170085632793481 GADFLVTEVENGGSLGSK ddPTM_KYSE-520_SHP099_60min_R1 2 GADFLVTEVENGGSLGSK 18 0 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 214.18 2.5251999999999998e-17 574080000.0 497350.0 709900.0 746380.0 565270.0 737200.0 693690.0 618530.0 624260.0 763530.0 721290.0 False True 469761.00405735517 675795.3384183767 794492.8490502234 618993.0908453777 795213.4459057738 689360.4233987605 681057.0486710726 622094.5877633793 624892.1990249708 714899.931755129 0.6571003621500694 0.9453006055816123 1.1113343473116415 0.8658457825358951 1.1123423161525132 0.9642754080369441 0.9526606709823432 0.8701841476416061 0.8740974383517103 1.0 19.447381788965433 -4.267987127474277 5.212934424740858 0.9686502249710781 0.6448393950290169 0.5469810537885957 0.08459352056382034 0.11440949306005627 10.674536888979386 0.021287437431998804 0.13224006172958086 5.395266138932816e-05 4.267987127474277 -0.32381082994206123 GADNDGS(ph)GS(ph)ESGYTTPK ddPTM_KYSE-520_SHP099_60min_R1 2 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 2 GADNDGS(0.999)GS(0.969)ES(0.021)GY(0.01)TTPK;GADNDGS(1)GS(0.995)ES(0.005)GYTTPK 188.04 8.890499999999999e-10 415340000.0 1639050.0 1490170.0 1350360.0 1376920.0 1378970.0 1368980.0 1271870.0 1393100.0 1638380.0 1338510.0 True False 1548128.629134832 1418579.9964092276 1437406.3662523911 1507782.062813906 1487487.0937339726 1360435.688022652 1400443.031855006 1388267.6612519857 1340891.492198778 1326651.8427450233 1.1669441667012974 1.0692933524096213 1.0834842420134898 1.1365318422157389 1.121233955893175 1.0254654945548678 1.0556221208401586 1.046444603264916 1.0107335240452318 1.0 20.339358378881194 -6.262340884775933 24.986251881020802 1.032303994496778 1.1123206748020804 0.689116167500978 0.02937947295059044 52.35137001318068 1450961.8103253972 0.010129965019187864 0.009461869938987654 5.465867696635226e-07 6.262340884775933 0.0800166803053024 GADNDGS(ph)GSESGYTTPK ddPTM_KYSE-520_SHP099_60min_R1 6 GADNDGSGSESGYTTPK 17 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 GADNDGS(0.998)GS(0.002)ESGYTTPK;GADNDGS(0.994)GS(0.006)ESGYTTPK;GADNDGS(0.983)GS(0.017)ESGYTTPK;GADNDGS(0.998)GS(0.002)ESGYTTPK;GADNDGS(0.98)GS(0.02)ESGYTTPK;GADNDGS(0.998)GS(0.002)ESGYTTPK 321.3 1.4664000000000002e-47 4382320000.0 4906330.0 4851330.0 4273830.0 4115220.0 4314240.0 4373010.0 4313130.0 4487220.0 5788440.0 4175290.0 True False 4634166.094373631 4618264.824805212 4549327.9201697735 4506329.271513995 4653746.143332234 4345716.422504299 4749143.272492303 4471654.881145019 4737405.210697815 4138300.1789264614 1.1198235734498616 1.115981109423353 1.0993228435521416 1.0889324303881227 1.1245549965250434 1.0501211208974321 1.1476072462496676 1.080553533529565 1.144770801021682 1.0 21.98060686675544 -11.12926084139807 2.542793715670974 0.7729534413698027 1.1065316543679655 0.5681741157640114 0.028211621331663866 5202761.131820219 1265435.2965262022 6878468.996421993 0.006550115192685592 7.425730075212642e-12 11.12926084139807 0.3335782129981628 GADS(ph)GEEKEEGINR ddPTM_KYSE-520_SHP099_60min_R1 11 GADSGEEKEEGINR 14 1 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR;GADS(1)GEEKEEGINR 249.71 1.3444e-18 17015870000.0 18066665.0 15795647.0 14376431.0 15238110.0 16183714.0 15755862.0 16481538.0 16956358.0 17914030.0 15891733.0 True False 17064471.077446207 15036800.408370491 15303158.745362896 16686335.39289518 17457280.219063334 15657523.820917739 18147652.705349997 16897540.351741713 14661293.727946926 15750944.609201167 1.083393504379269 0.9546602303195519 0.9715708565455377 1.0593863293219627 1.1083322716318476 0.9940688770990372 1.1521628166191857 1.0727953637695318 0.9308199661487156 1.0 23.908935016134894 -3.909829549755746 19.674727024099262 1.033169407895193 4.068817402086218 0.05289533907653943 0.06717810104686914 1368.0787343824838 311292.97717772075 0.016678872954355065 7924.419960719104 0.00012307517167802894 3.909829549755746 3.0356479941910246 GADS(ph)GEEKEEGINREDK ddPTM_KYSE-520_SHP099_60min_R1 10 GADSGEEKEEGINREDK 17 2 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK;GADS(1)GEEKEEGINREDK 256.11 7.6279e-25 12647040000.0 15085940.0 13781490.0 12769700.0 13257100.0 13425510.0 13267270.0 12411840.0 13585780.0 16384700.0 13303320.0 True False 14249092.835124182 13119406.533961767 13592855.29424242 14517050.798107542 14482021.256297356 13184464.04668607 13666549.915085075 13538654.100124879 13409651.50467494 13185462.934626358 1.0806668606002923 0.9949902099765402 1.0308970842841025 1.100989087003104 1.098332408054184 0.9999242432408145 1.036486165320395 1.0267864061542356 1.0170027075393644 1.0 23.65244488856268 -6.282644189202841 24.9806490251877 1.0189919467572608 1.058027968385037 0.3381177564585467 0.031284980962483847 1233.072590125081 1452636.5163643549 0.012030705891882397 0.010616563188743289 5.216218928928597e-07 6.282644189202841 0.03903602162777631 GADS(ph)GEEKEEGINREDKTDK ddPTM_KYSE-520_SHP099_60min_R1 3 GADSGEEKEEGINREDKTDK 20 3 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 GADS(1)GEEKEEGINREDKTDK;GADS(1)GEEKEEGINREDKTDK;GADS(0.999)GEEKEEGINREDKT(0.001)DK 116.24 0.00010052 4693470000.0 3403790.0 3850570.0 3401840.0 2899040.0 3074250.0 2962390.0 2500370.0 2550300.0 4422720.0 2715250.0 True False 3214974.983412858 3665582.837376598 3621128.0495364475 3174563.889971838 3316175.9849102283 2943900.625167222 2753131.800859605 2541453.6045444943 3619665.5356983007 2691194.997432536 1.1946272887992213 1.3620651200948468 1.345546514834893 1.179611248163157 1.2322317736447708 1.0939008982908238 1.0230146100472683 0.9443587725783904 1.3450030708111258 1.0 21.359815498257433 -5.979294393841354 1.4661120230934024 1.0714981012901619 1.2964958811198313 0.3993871840028891 0.11232618235183131 0.38900217756361416 1.7184733422116276 0.04491786184211317 0.05111534568904036 1.0488312196904113e-06 5.979294393841354 0.2249977798296694 GADTVIY(ph)ERLHRMNPTKQET(ph)QDALDIFANET(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 GADTVIYERLHRMNPTKQETQDALDIFANETLR 33 3 O43520;A0A2R8Y5C5 O43520 ATP8B1 Phospholipid-transporting ATPase IC 3 GADT(0.322)VIY(0.565)ERLHRMNPT(0.529)KQET(0.583)QDALDIFANET(1)LR 46.18600000000001 0.048208 6732900000.0 232410.0 261830.0 253420.0 375040.0 233740.0 323470.0 243390.0 214240.0 266450.0 329370.0 True False 219517.75400215137 249251.29378515785 269755.85868633626 410683.68884011236 252134.00820132313 321451.1037448961 267994.23645749217 213496.8514439919 218069.3966578962 326452.0380459823 0.6724349319921576 0.7635158146877601 0.826326158969606 1.2580215191741753 0.7723462524862806 0.9846809524271318 0.820929892371338 0.653991479795632 0.6679982700159467 1.0 18.31651152269872 -7.00305108808463 24.23067800744193 0.7440890446432422 0.8857415706455634 0.0612260644500201 0.17452985487560005 187.15624239716172 1486333.628572138 0.0758918017776403 0.0499979789738632 9.929992304212098e-08 7.00305108808463 0.14165252600232114 GADTVIYERLHRMNPT(ph)KQET(ph)QDALDIFANET(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 GADTVIYERLHRMNPTKQETQDALDIFANETLR 33 3 O43520;A0A2R8Y5C5 O43520 ATP8B1 Phospholipid-transporting ATPase IC 3 GADT(0.204)VIY(0.401)ERLHRMNPT(0.673)KQET(0.721)QDALDIFANET(1)LR 42.218 0.064161 5113500000.0 118880.0 118330.0 101750.0 181260.0 91521.0 101120.0 99827.0 118450.0 117080.0 104230.0 True False 112285.4894185952 112645.24918304905 108308.9678057562 198486.89590219385 98723.18201674211 100488.87257144057 109918.48737763273 118039.12459643783 95821.22334661838 103306.60328971304 1.0869149293748608 1.090397376314336 1.0484225050165916 1.9213379356357039 0.9556328334586979 0.9727245826641844 1.0640025310809738 1.1426096768026426 0.9275420960061705 1.0 16.65657294769933 GAEFLLR ddPTM_KYSE-520_SHP099_60min_R1 1 GAEFLLR 7 0 Q9BXT2 Q9BXT2 CACNG6 Voltage-dependent calcium channel gamma-6 subunit 0 132.72 0.014565 219170000.0 182280.0 195940.0 142570.0 113790.0 173920.0 213180.0 153530.0 1393000.0 181760.0 106920.0 False True 172168.5650338289 186526.74828806386 151760.29032006543 124604.56738778885 187606.51453056443 211849.46454489406 169050.3107084054 1388168.0081286444 148756.96579673182 105972.77198250126 1.6246490661040573 1.7601384279998267 1.4320687048284895 1.175816816496639 1.7703275192380825 1.9990933574888055 1.5952240141110945 13.099289394429217 1.4037281748305621 1.0 16.693334109302704 -7.100019337350854 23.94283695000907 6.020404516121194 1.6221498004553985 0.19966149843283243 3.1152719683863017 34.6885519585694 8296.48567507135 1.3400133931971645 0.7736572981094163 7.942928673354471e-08 7.100019337350854 -4.398254715665796 GAES(ph)ENEEESPR ddPTM_KYSE-520_SHP099_60min_R1 1 GAESENEEESPR 12 0 Q9UEG4 Q9UEG4 ZNF629 Zinc finger protein 629 1 GAES(1)ENEEESPR 153.2 0.0013099000000000001 0.0 491620.0 460290.0 427720.0 423000.0 465990.0 449620.0 459490.0 480220.0 531550.0 447670.0 True False 464348.858579827 438176.97749062453 455291.5155761974 463201.7928204126 502660.76187958673 446813.7548019292 505939.7333902504 478554.2289041902 435033.9192850624 443703.9920819902 1.0465284668748753 0.9875434643591299 1.0261154366446765 1.0439432619186793 1.1328741026668567 1.0070086426433693 1.1402641004337863 1.0785438883672702 0.9804597818553644 1.0 18.759238007831552 -5.335828894446387 3.7484102746829997 1.063787866056942 1.0162673000373568 0.07448084689048795 0.05199721088819517 0.4694255939753338 12.757278918771071 0.014639600063750674 0.02307256386299435 4.614993626183171e-06 5.335828894446387 -0.04752056601958521 GAES(ph)PFEEK ddPTM_KYSE-520_SHP099_60min_R1 4 GAESPFEEK 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK;GAES(1)PFEEK 159.94 5.9258999999999996e-05 10612310000.0 11839710.0 10565160.0 10187290.0 9748270.0 10741910.0 9452630.0 9885660.0 10355660.0 12860020.0 10613990.0 True False 11182937.684423253 10057593.854971526 10843979.013640324 10674742.649875745 11587237.203892672 9393632.629894927 10884998.987544158 10319738.632489221 10524964.542722747 10519958.306159258 1.0630211032182353 0.9560488323497418 1.0308005695508657 1.0147133989709696 1.10145276879173 0.8929343973155401 1.0346998220678474 0.9809676361974922 1.000475879886383 1.0 23.326625651007486 -6.24693337760816 24.997261344560513 0.9839312824909071 1.0277595912410749 0.21564724037685523 0.04836789836645274 1498.713946450432 2582638.924128851 0.01552831838480298 0.015459528841204672 5.663261589180862e-07 6.24693337760816 0.043828308750167744 GAFCEVRPDDKR ddPTM_KYSE-520_SHP099_60min_R1 1 GAFCEVRPDDKR 12 2 O60502;O60502-2;O60502-4 O60502 MGEA5 Protein O-GlcNAcase 0 106.01 0.0004333 260280000.0 353420.0 345010.0 254800.0 212460.0 354140.0 298280.0 224430.0 265710.0 285390.0 284460.0 False True 333815.0880746964 328435.201729432 271224.81569441454 232652.1345215717 382008.80321903236 296418.32387865166 247117.5746257241 264788.3140271802 233570.3700964422 281939.90570653137 1.183993756535343 1.1649120790701304 0.9619951280565794 0.8251834160849054 1.3549298821737628 1.0513528517214967 0.8764902364794946 0.9391657891196001 0.8284402646412298 1.0 18.10502816550718 -6.6809798858372735 5.54508802257233 0.906384494416062 1.0902556612196381 0.2930993396365814 0.13727511756422447 0.2854603553020401 14.680219882161193 0.05575352700837703 0.04247004698001885 2.0845874276345104e-07 6.6809798858372735 0.18387116680357618 GAFECVRK ddPTM_KYSE-520_SHP099_60min_R1 2 GAFECVRK 8 1 Q96CQ1-4 Q96CQ1-4 0 ; 74.335 0.035435 1639600000.0 1198820.0 1108980.0 960360.0 1153360.0 1030640.0 1170280.0 1121770.0 1302370.0 1307340.0 1354420.0 False True 1132319.0648115787 1055702.9361870824 1022266.3422303294 1262974.9876296725 1111745.5044605625 1162975.8484266754 1235169.4590201753 1297852.3824454423 1069960.0113594823 1342420.8925228142 0.8434903472662805 0.7864172422131317 0.7615095592777779 0.9408189299379579 0.8281646320113932 0.8663272859535824 0.9201059562615409 0.9667998983585436 0.7970376633134071 1.0 20.356405643510513 -1.0000002024403778 0.04309864517913659 1.3116918241186122 0.11746534272936117 0.3916158448211102 0.06058415849077951 647.2441565130883 2.123518663916813 15.391623760212399 54.63106843535658 0.09999995338639125 1.0000002024403778 -1.194226481389251 GAGAELKDTQS(ph)PSTCSEGLLGWSQK ddPTM_KYSE-520_SHP099_60min_R1 3 GAGAELKDTQSPSTCSEGLLGWSQK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GAGAELKDT(0.057)QS(0.927)PS(0.013)T(0.001)CS(0.002)EGLLGWSQK;GAGAELKDT(0.01)QS(0.981)PS(0.007)T(0.002)CSEGLLGWSQK;GAGAELKDT(0.007)QS(0.993)PS(0.001)TCSEGLLGWSQK 174.98 1.0137999999999999e-10 2263400000.0 1034450.0 1133770.0 1036760.0 713960.0 809850.0 1046940.0 734860.0 883430.0 1319150.0 977050.0 True False 977066.9963750492 1079301.9873765341 1103591.20847465 781814.5437400993 873580.5875838173 1040405.6591173256 809146.820342465 880365.5875241117 1079625.6130653552 968394.0971333971 1.0089559604579637 1.1145276396990051 1.1396095987588712 0.8073309678925105 0.9020920203559242 1.074361834915242 0.8355552999937425 0.9090984653150366 1.114861827701368 1.0 19.885234759822474 -5.237445380027599 24.8148696134158 0.9437920197080669 1.0903807325724617 0.3029737981769872 0.09611898950089179 861.9543965231059 891441.8667847207 0.026094776840819053 0.04516503952815692 5.7883478216323565e-06 5.237445380027599 0.1465887128643948 GAGATS(ph)GSPPAGR ddPTM_KYSE-520_SHP099_60min_R1 1 GAGATSGSPPAGR 13 0 B4DEE8;P16455 B4DEE8 MGMT Methylated-DNA--protein-cysteine methyltransferase 1 GAGAT(0.068)S(0.548)GS(0.384)PPAGR 92.24700000000001 0.0051643999999999995 655920000.0 290270.0 272340.0 241060.0 204830.0 236810.0 261800.0 246680.0 253070.0 278430.0 259570.0 True False 274168.1444611009 259256.37760932624 256599.11330963703 224296.98161561473 255445.59973541275 260166.00909022067 271616.821764798 252192.15923698188 227874.13064912008 257270.41174240437 1.0656808243289775 1.00771937143285 0.9973906893209333 0.8718335703531864 0.9929070273000583 1.0112550733222891 1.0557639330742712 0.980261031686352 0.8857378083465046 1.0 17.9729260190053 -4.399544532696454 2.129860785050438 0.9749999017305507 1.0752807393685608 0.2231283490840814 0.0527453020478698 0.8333970045404934 5.302011082393629 0.015020762723005229 0.14284363377204468 3.985249053456611e-05 4.399544532696454 0.1002808376380101 GAGATS(ph)GSPPAGRN ddPTM_KYSE-520_SHP099_60min_R1 4 GAGATSGSPPAGRN 14 1 B4DEE8;P16455 B4DEE8 MGMT Methylated-DNA--protein-cysteine methyltransferase 1 GAGAT(0.177)S(0.605)GS(0.218)PPAGRN;GAGAT(0.069)S(0.596)GS(0.335)PPAGRN;GAGAT(0.017)S(0.739)GS(0.245)PPAGRN;GAGAT(0.017)S(0.582)GS(0.401)PPAGRN 159.58 1.313e-05 3214100000.0 1808530.0 1903580.0 1695040.0 1134470.0 1508130.0 1764500.0 1247730.0 1355060.0 1992140.0 1750760.0 True False 1708207.2356848281 1812129.1594681654 1804304.9905598932 1242289.6877091571 1626811.250914099 1753487.1009919574 1373862.7250713122 1350359.6131333818 1630417.593762662 1735249.6284706674 0.9844158486812802 1.0443045944146114 1.0397956357150104 0.7159141067236694 0.9375084853629164 1.0105099993811053 0.7917378010229816 0.7781932875695229 0.939586770117682 1.0 20.72671178939066 -5.179534988295044 24.999998923391182 0.876591403254432 1.024986053817149 0.3259871391870718 0.09261820018677201 110.61082525266238 33760.78319628226 0.02529282722893309 0.043808459709188875 6.614012505203577e-06 5.179534988295044 0.14839465056271695 GAGATSGS(ph)PPAGR ddPTM_KYSE-520_SHP099_60min_R1 3 GAGATSGSPPAGR 13 0 B4DEE8;P16455 B4DEE8 MGMT Methylated-DNA--protein-cysteine methyltransferase 1 GAGAT(0.063)S(0.181)GS(0.756)PPAGR;GAGAT(0.003)S(0.043)GS(0.954)PPAGR;GAGATS(0.01)GS(0.99)PPAGR 144.09 9.8217e-06 1562810000.0 807110.0 772340.0 686290.0 559570.0 660870.0 795800.0 707940.0 787300.0 802170.0 757560.0 True False 762337.9993661037 735235.6270940253 730529.351502824 612751.3645591442 712876.7091640639 790833.1170129778 779505.4840285841 784569.0400572018 656516.1490601036 750848.6077727607 1.01530187507096 0.9792062201126694 0.972938278023569 0.8160784453962647 0.9494280228855553 1.0532524250911552 1.0381659844064015 1.0449097620150962 0.8743655408878295 1.0 19.51816252354377 -6.120431105905109 8.367608028075564 1.007016826185603 0.9419426621336806 0.1414031343868628 0.06765180434897743 0.5757559916530891 37.20555330522681 0.023318726709643696 0.02334132305265084 7.578249405236393e-07 6.120431105905109 -0.06507416405192235 GAGATSGS(ph)PPAGRN ddPTM_KYSE-520_SHP099_60min_R1 1 GAGATSGSPPAGRN 14 1 B4DEE8;P16455 B4DEE8 MGMT Methylated-DNA--protein-cysteine methyltransferase 1 GAGAT(0.024)S(0.081)GS(0.895)PPAGRN 129.17 0.00037556 368060000.0 980580.0 1067800.0 898920.0 571720.0 698760.0 848230.0 608930.0 722670.0 1022500.0 840270.0 True False 926185.2726622319 1016501.2851995243 956865.8215228542 626056.0969061141 753748.4365994543 842935.8819350576 670486.586984102 720163.2264424468 836839.775127413 832825.8615201676 1.112099558209749 1.2205448127464384 1.1489386506037107 0.7517250914415242 0.9050492683111782 1.0121394169922102 0.8050741673178284 0.8647224584595917 1.0048196313211488 1.0 19.667655343395463 -5.169435974009683 7.593058995195423 0.9010001450106592 1.1693698360115576 0.6535791174632226 0.08477390051711675 0.1643984705640578 12.010746643003781 0.022714743251135285 0.03956329788380474 6.769615868223373e-06 5.169435974009683 0.26836969100089847 GAGDGS(ph)DEEVDGK ddPTM_KYSE-520_SHP099_60min_R1 6 GAGDGSDEEVDGK 13 0 P35579;P35579-2 P35579 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGK;GAGDGS(1)DEEVDGK;GAGDGS(1)DEEVDGK;GAGDGS(1)DEEVDGK;GAGDGS(1)DEEVDGK;GAGDGS(1)DEEVDGK 257.81 2.4583000000000003e-25 10334070000.0 11264090.0 9882930.0 9637520.0 10774180.0 10936570.0 10404420.0 11869600.0 12198370.0 11375100.0 10759260.0 True False 10639248.473293278 9408139.208219647 10258769.959777208 11798154.827824675 11797215.838428797 10339482.155456357 13069495.004132649 12156056.701590957 9309668.582935765 10663941.326977612 0.9976844533435433 0.8822384632236263 0.9620054767016204 1.1063596906687523 1.1062716379153579 0.9695741788544504 1.22557829262146 1.1399215664135918 0.8730044828157661 1.0 23.346237412062454 -5.156006632212607 5.180853521121293 1.0707100486076913 0.9365674273342247 0.21971352061986393 0.09617525074844105 0.30268152030217843 12.133529773731636 0.02616434387094574 0.04642370259907765 6.982217412882412e-06 5.156006632212607 -0.13414262127346654 GAGDGS(ph)DEEVDGKADGAEAKPAE ddPTM_KYSE-520_SHP099_60min_R1 11 GAGDGSDEEVDGKADGAEAKPAE 23 2 P35579;P35579-2 P35579 MYH9 Myosin-9 1 GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE;GAGDGS(1)DEEVDGKADGAEAKPAE 200.52 1.492e-15 22718770000.0 28047550.0 26323080.0 27706110.0 25722720.0 26124670.0 24656400.0 25032200.0 25816240.0 33156340.0 24391580.0 True False 26491696.490095254 25058479.725051392 29492090.181943346 28167399.57498225 28180532.89996092 24502510.261772815 27562699.066729255 25726689.488995682 27135984.459313475 24175489.57756206 1.0958080664758463 1.0365241888755319 1.219916977785458 1.1651221988540488 1.1656654484513957 1.013526951880812 1.140109240737402 1.0641641571086666 1.1224585285958026 1.0 24.527041770210204 -6.238820242701993 24.8989368105885 1.0765656144641869 1.137259665904271 0.23818062476498625 0.06034503364683423 1338.5371971715176 1473448.6615417325 0.020348035697831522 0.020331654636189012 5.770052401780858e-07 6.238820242701993 0.06069405144008422 GAGGGSPHHHR ddPTM_KYSE-520_SHP099_60min_R1 1 GAGGGSPHHHR 11 0 A0A1B0GUR0;A0A1B0GTP1;A0A1B0GTE9;A0A0G2JLL6 A0A1B0GUR0 0 67.704 0.046793 157530000.0 109580.0 127240.0 92492.0 96733.0 79677.0 119010.0 98958.0 109170.0 111920.0 80340.0 False True 103501.3789576858 121127.19940886639 98454.18231243246 105926.47523616298 85947.12659988368 118267.21444548195 108961.6403770101 108791.31475046944 91598.14927360376 79628.25010357428 1.2998072772296163 1.521158624625224 1.2364227794076958 1.3302625022951278 1.079354707507578 1.4852419121561644 1.3683791899894977 1.366240179948223 1.1503222682208885 1.0 16.280992733105094 -7.962238470182386 3.423385575665865 1.0015364023315738 1.3357778067696946 0.46644521261977023 0.1167996129867457 0.1816530846054634 4.766603655860261 0.1122131034356459 0.029811916385558773 1.0908411933752853e-08 7.962238470182386 0.3342414044381208 GAGGPAS(ph)AQGSVK ddPTM_KYSE-520_SHP099_60min_R1 1 GAGGPASAQGSVK 13 0 Q9UHV7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 GAGGPAS(0.999)AQGS(0.001)VK 136.81 0.00043492 0.0 129680.0 119490.0 90002.0 89431.0 99262.0 126640.0 91359.0 122100.0 131950.0 116520.0 True False 122486.39188932894 113749.52104185331 95803.67292829156 97930.49535158936 107073.3546764771 125849.59278527723 100594.45929791692 121676.46359835415 107991.20618881368 115487.72345118814 1.0606009732376347 0.9849490287158574 0.8295572037038533 0.8479732081045005 0.927140578034968 1.089722691074334 0.8710402828265467 1.0535878616551113 0.9350881891308307 1.0 16.817379973199973 -6.044549865331017 24.990112089805542 0.9883227031364968 0.9224287040483884 0.11247844581292776 0.08272607856715644 995.8718071714153 558629.0030486834 0.028050906152404593 0.028052312538996656 9.025060765249881e-07 6.044549865331017 -0.06589399908810845 GAGGS(ph)PVGVEEGLVNVGTGQK ddPTM_KYSE-520_SHP099_60min_R1 2 GAGGSPVGVEEGLVNVGTGQK 21 0 A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;Q7Z5J4 A0A1W2PQJ7 RAI1 Retinoic acid-induced protein 1 1 GAGGS(1)PVGVEEGLVNVGTGQK;GAGGS(1)PVGVEEGLVNVGTGQK 223.54 2.8671e-19 1237220000.0 967800.0 1092130.0 784620.0 675400.0 690670.0 856590.0 663990.0 947420.0 1175280.0 920420.0 True False 914114.204738531 1039662.4354794496 835197.860636388 739589.8129335858 745021.7996252584 851243.7040740736 731112.5891179173 944133.6211494904 961878.7783977953 912265.7948759246 1.0020261746883294 1.1396485994751693 0.9155203070504047 0.8107174653349531 0.816671855735408 0.9331093074577563 0.8014249720032027 1.0349326111453077 1.054384351359593 1.0 19.799094699136017 -10.221029332010966 22.518355937635082 0.9999999999280628 0.9405097662044875 0.02059335754998981 0.10841094386221793 0.0 0.0 0.11501056588455957 0.02789415948259402 6.011331359100933e-11 10.221029332010966 -0.059490233723575314 GAGKPATGPTNSSS(ph)AK ddPTM_KYSE-520_SHP099_60min_R1 2 GAGKPATGPTNSSSAK 16 1 M0R1H1;M0R3B3;Q9BT25-3;Q9BT25 M0R1H1 HAUS8 HAUS augmin-like complex subunit 8 1 GAGKPATGPTNSS(0.013)S(0.987)AK;GAGKPATGPTNS(0.003)S(0.022)S(0.975)AK 145.88 7.6178e-06 1235650000.0 332175.0 286673.0 252975.0 254899.0 248660.0 250573.0 247110.0 241148.0 332470.0 270523.0 True False 313748.5905755544 272900.79877505417 269282.1732743115 279124.52432182134 268228.1273181353 249009.08096166528 272090.2903611933 240311.51387236646 272101.8288866608 268126.37668370915 1.1701519054414506 1.017806611010811 1.0043106411420528 1.041018521840863 1.000379487597172 0.9287004286616857 1.0147837513284272 0.8962621165609751 1.014826785235088 1.0 18.032553624525587 -1.0000000000609295 0.7390446359875801 0.9755326082414146 31.508189279374328 0.6416801563669158 0.04080795089333587 219.2677741983991 0.9891267449058545 0.015039317592093666 11129.20246539966 0.09999999998597046 1.0000000000609295 30.532656671132912 GAGNCPECGT(ph)PLRK ddPTM_KYSE-520_SHP099_60min_R1 1 GAGNCPECGTPLRK 14 1 P51948-2;P51948 P51948-2 MNAT1 CDK-activating kinase assembly factor MAT1 1 GAGNCPECGT(1)PLRK 70.416 0.039323000000000004 734330000.0 609180.0 558510.0 569950.0 456790.0 535230.0 637680.0 492900.0 580110.0 767200.0 682360.0 True False 575387.5710297778 531678.3412593983 606689.8889522427 500203.1842610788 577349.5559578765 633700.0025846148 542727.142240428 578097.7338086918 627895.8195381418 676314.8212680466 0.8507688327027393 0.7861403070577926 0.8970524818822369 0.7396010977893847 0.8536698262436173 0.9369896720531249 0.8024770789775828 0.8547760830152974 0.9284075992314906 1.0 19.36733544484057 -8.359235027924072 0.4889017523627328 1.0103642074283063 0.8256537855631455 0.4791895401533419 0.05339576655498954 1.43958317323264 0.7051002147039026 0.07996681595473198 0.02981761642556669 4.3728539459182966e-09 8.359235027924072 -0.18471042186516085 GAGTDDHTLIR ddPTM_KYSE-520_SHP099_60min_R1 1 GAGTDDHTLIR 11 0 P08758;D6RBE9;D6RBL5 P08758 ANXA5 Annexin A5;Annexin 0 218.49 1.4851e-09 364820000.0 519980.0 466350.0 304870.0 306790.0 433260.0 452440.0 333010.0 359640.0 342440.0 376590.0 False True 491135.67284556816 443945.84599437885 324522.40800924733 335947.22936022276 467355.09708781185 449616.1541359039 366673.9006644049 358392.492780607 280261.5282099083 373253.705582587 1.3158226308268983 1.1893943431893146 0.869441892084425 0.9000506206250919 1.2521110710966639 1.2045859087564257 0.9823717626381978 0.9601846878417882 0.7508606720259257 1.0 18.509797057634096 -7.114729901032438 2.6267005254255515 0.8856678862000458 1.1081190218185006 0.3032280113850555 0.14791047260034546 0.4071603474204402 5.413899692558355 0.09085973123483754 0.0463599799402435 7.678388797485393e-08 7.114729901032438 0.22245113561845486 GAILSEEELAAMS(ph)PTAAAVAK ddPTM_KYSE-520_SHP099_60min_R1 9 GAILSEEELAAMSPTAAAVAK 21 0 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 GAILSEEELAAMS(0.954)PT(0.045)AAAVAK;GAILSEEELAAMS(0.992)PT(0.008)AAAVAK;GAILSEEELAAMS(0.999)PT(0.001)AAAVAK;GAILSEEELAAMS(0.98)PT(0.02)AAAVAK;GAILSEEELAAMS(0.988)PT(0.012)AAAVAK;GAILSEEELAAMS(0.999)PT(0.001)AAAVAK;GAILSEEELAAMS(0.992)PT(0.008)AAAVAK;GAILSEEELAAMS(0.984)PT(0.016)AAAVAK;GAILSEEELAAMS(0.988)PT(0.012)AAAVAK 306.11 1.3599e-53 3315427000.0 2783419.0 3993130.0 2542148.0 2395806.0 2453889.0 3631260.0 2587789.0 3329370.0 3461100.0 3632664.0 True False 2629017.1994617837 3801294.040989673 2706018.927660615 2623502.681914661 2646996.1035814835 3608595.9593924987 2849387.9665068304 3317821.1925508017 2832651.487230794 3600481.423129822 0.7301849087660157 1.0557738241807921 0.7515714177212253 0.7286533031558057 0.7351783810289753 1.0022537364616153 0.7913908257384975 0.92149376781583 0.7867424253416728 1.0 21.779758392636264 -6.241964940752063 24.907600178560383 0.8886579504317383 0.807782457682236 0.15789875444925883 0.11333158417401072 1905.8772785892436 2437597.4085788773 0.037534320000636376 0.03747888062168816 5.728422729011582e-07 6.241964940752063 -0.08087549274950234 GAKEEHGGLIRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 11 GAKEEHGGLIRSPR 14 2 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR;GAKEEHGGLIRS(1)PR 142.43 3.2607e-06 126179047000.0 20555050.0 22849270.0 26498950.0 14204249.0 16345560.0 15100270.0 11834923.0 11500942.0 27724420.0 12002815.0 True False 19414820.4010237 21751556.771746498 28207114.71681911 15554216.554296816 17631862.57848559 15006023.613769243 13031312.514557743 11461047.916542053 22690364.203753486 11896479.397148779 1.6319803324063116 1.8284028447071223 2.3710472464298546 1.3074638332097381 1.482107604264116 1.261383566752171 1.095392349242495 0.9633982906984158 1.907317572389666 1.0 23.5040313547402 -5.344898387334952 9.568465105021275 1.2844665304935485 1.931703353681996 0.4894635335956242 0.3067922113506924 0.3703324357416105 40.39029638627042 0.08569716888736045 0.12719063503180103 4.5196167829598814e-06 5.344898387334952 0.6472368231884476 GAKLT(ph)PEEEEILNK ddPTM_KYSE-520_SHP099_60min_R1 6 GAKLTPEEEEILNK 14 1 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 1 GAKLT(1)PEEEEILNK;GAKLT(1)PEEEEILNK;GAKLT(1)PEEEEILNK;GAKLT(1)PEEEEILNK;GAKLT(1)PEEEEILNK;GAKLT(1)PEEEEILNK 174.02 4.6775e-08 3699920000.0 1948822.0 2171180.0 1538943.0 1394698.0 1504928.0 2111460.0 1532669.0 2017343.0 2434895.0 2060348.0 True False 1840716.958779658 2066873.253792377 1638145.7281758618 1527249.6785887573 1623357.2717309862 2098281.5949336807 1687606.1399279682 2010345.3079843943 1992779.446707931 2042094.9196464866 0.9013865815298684 1.012133781788253 0.8021888269813855 0.7478837853693618 0.7949470203921817 1.027514232931406 0.8264092543847643 0.984452431002772 0.9758505481483237 1.0 20.961618495736083 -7.28415825000774 1.079085483964759 1.0022440000858162 0.8655373580124964 0.24578825913159763 0.08699717030873462 0.8221201417285916 1.69147058925545 0.0821814734969441 0.03211477304301673 5.198065527729892e-08 7.28415825000774 -0.13670664207331973 GALHT(ph)VSHEDIR ddPTM_KYSE-520_SHP099_60min_R1 1 GALHTVSHEDIR 12 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GALHT(0.938)VS(0.062)HEDIR 188.91 0.0019136 0.0 668310.0 781490.0 1055200.0 541770.0 638510.0 744080.0 515130.0 612950.0 724310.0 714860.0 True False 631237.5120570449 743946.047359595 1123219.8803796957 593259.65791091 688757.1043750612 739435.9207175375 567204.3675843208 610823.8195136049 592793.5623692288 708526.8965526643 0.8909153839160224 1.0499898465100794 1.5852889789289848 0.8373142371833916 0.9720973300042764 1.0436243483702043 0.8005403469424409 0.8621039264501693 0.836656399712508 1.0 19.434463095098273 GALHTVS(ph)HEDIR ddPTM_KYSE-520_SHP099_60min_R1 12 GALHTVSHEDIR 12 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2;H0YD72 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 GALHT(0.002)VS(0.998)HEDIR;GALHTVS(1)HEDIR;GALHT(0.001)VS(0.999)HEDIR;GALHTVS(1)HEDIR;GALHT(0.057)VS(0.943)HEDIR;GALHTVS(1)HEDIR;GALHT(0.003)VS(0.997)HEDIR;GALHTVS(1)HEDIR;GALHTVS(1)HEDIR;GALHT(0.001)VS(0.999)HEDIR;GALHT(0.1)VS(0.9)HEDIR;GALHTVS(1)HEDIR 208.15 9.585600000000001e-11 69933980000.0 25855390.0 24847490.0 25688490.0 23698620.0 26860850.0 23000970.0 23216350.0 25521020.0 27954720.0 24777890.0 True False 24421139.975257836 23653779.28355711 27344411.168437254 25950929.719550095 28974646.07766965 22857412.414453365 25563285.227741055 25432493.53827084 22878847.529144 24558377.171506714 0.9944117970299722 0.9631654045529058 1.113445362349226 1.056703769077179 1.1798273914974646 0.9307379007507526 1.0409191555784176 1.0355934091515744 0.9316107236796025 1.0 24.549711894138966 -6.311914718754613 24.999974944522318 0.9933185504177131 1.0586659901186262 0.2386107920320647 0.06538771957218051 651.7858373636033 322821.4546069777 0.023898112707834623 0.02107622595505782 4.876242341687228e-07 6.311914718754613 0.06534743970091306 GALQNIIPAS(ph)TGAAK ddPTM_KYSE-520_SHP099_60min_R1 1 GALQNIIPASTGAAK 15 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 GALQNIIPAS(0.99)T(0.01)GAAK 187.89 5.2836e-11 663710000.0 1217000.0 1572700.0 1128200.0 941820.0 933920.0 1439700.0 985530.0 1361900.0 1499300.0 1481400.0 True False 1149490.583970646 1497145.1313291746 1200925.577183825 1031330.2896314914 1007414.1907220824 1430714.298270401 1085156.9902459106 1357175.886769848 1227064.9142772905 1468275.9485117588 0.7828845695768339 1.0196619598970327 0.8179154459358137 0.7024090333134214 0.6861204746581834 0.974417853619798 0.7390688319493507 0.9243329826014506 0.8357181873891217 1.0 20.485691703810925 -8.481956925708293 0.7743434686328553 1.0006712347457805 0.8227037533252289 0.1941694596747916 0.10581329978931295 2.862904248948334 2.863977851123367 0.11545685713239462 0.03834171041990474 3.296424052223543e-09 8.481956925708293 -0.17796748142055152 GALQNIIPASTGAAK ddPTM_KYSE-520_SHP099_60min_R1 2 GALQNIIPASTGAAK 15 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 232.25 4.3978e-16 1107790000.0 1037540.0 1263190.0 1197500.0 923980.0 1028780.0 1130890.0 979730.0 950240.0 1253890.0 1098670.0 False True 979985.5879152885 1202504.4563131537 1274692.7660677454 1011794.7813952828 1109739.133042513 1123831.6960276535 1078770.669643366 946943.8392276838 1026215.1839946307 1088936.638552325 0.8999473001644243 1.104292402092201 1.1705848815614945 0.9291585438252884 1.0191034939533705 1.0320450761228122 0.9906643154899498 0.8696041676828764 0.9424011899892737 1.0 20.054488580398512 -7.024312628719147 5.227077712546142 0.9287530683368298 1.030199386751377 0.19994724188574464 0.0782978027274582 0.27363815445951645 21.316853273915132 0.03706581935550137 0.02219934254870341 9.455562536507143e-08 7.024312628719147 0.10144631841454721 GAMPPAPVPAGTPAPPGPATMMPDGTLGLT(ph)PPTTER ddPTM_KYSE-520_SHP099_60min_R1 1 GAMPPAPVPAGTPAPPGPATMMPDGTLGLTPPTTER 36 0 Q15233-2;Q15233 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 1 GAMPPAPVPAGTPAPPGPATMMPDGT(0.006)LGLT(0.71)PPT(0.142)T(0.142)ER 72.292 0.0026666 0.0 29654.0 52557.0 29691.0 24843.0 30213.0 47880.0 25856.0 28832.0 35537.0 41080.0 True False 28009.03350621655 50032.082830334686 31604.929367279678 27204.071250679695 32590.591211545216 47581.1631598158 28469.776810242478 28731.988521439373 29084.376614868295 40716.063159756355 0.6879111420060032 1.2288045294071126 0.7762275356355647 0.6681410023346296 0.8004357170699564 1.1686091303356876 0.6992271501922103 0.7056671566871424 0.7143219250041642 1.0 15.31331045337782 GAPGS(ph)PTQERPAGGLGEAPNGAPSVCAEEGSLGPR ddPTM_KYSE-520_SHP099_60min_R1 1 GAPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPR 35 1 A0A0J9YWL0;A0A494C1M5 A0A0J9YWL0 1 GAPGS(0.796)PT(0.204)QERPAGGLGEAPNGAPSVCAEEGSLGPR 181.87 1.8669e-11 1119000000.0 119440.0 158670.0 137780.0 127340.0 97266.0 127890.0 132210.0 145140.0 158150.0 165280.0 True False 112814.42510226295 151047.25503147437 146661.51925579453 139442.35531383296 104920.28083216342 127091.79107161314 145575.0770452568 144636.54321593072 129433.94663706617 163815.7477858944 0.68866654535381 0.9220557673667105 0.8952833975856809 0.8512145944362002 0.640477379313332 0.7758215726470992 0.8886512988697645 0.8829220949195268 0.7901190721067616 1.0 17.321714525924687 -9.864885499980414 7.274044404695182 1.000000000999203 0.8194723903895688 0.2818611895566647 0.08832112217063989 1.4842896937585914e-09 2.7449429818017916e-10 0.08933012000079492 0.021665736327541107 1.364942950956477e-10 9.864885499980414 -0.18052761060963418 GAPGSPT(ph)QERPAGGLGEAPNGAPSVCAEEGSLGPR ddPTM_KYSE-520_SHP099_60min_R1 1 GAPGSPTQERPAGGLGEAPNGAPSVCAEEGSLGPR 35 1 A0A0J9YWL0;A0A494C1M5 A0A0J9YWL0 1 GAPGS(0.448)PT(0.552)QERPAGGLGEAPNGAPSVCAEEGSLGPR 217.01 5.0646e-22 371360000.0 53791.0 44301.0 42508.0 34338.0 19839.0 43174.0 25141.0 35718.0 47762.0 39010.0 True False 50807.10600029997 42172.713462843305 45248.13369520473 37601.473195903855 21400.216431530975 42904.535051417835 27682.497632514915 35594.10259464388 39089.624782039544 38664.40174932076 1.3140538506118884 1.0907375144782676 1.1702789037981076 0.9725088581401475 0.5534862939372113 1.1096650435609434 0.7159686010918618 0.9205910601027 1.0109977915984762 1.0 15.238718270084188 -5.342085589414081 3.963074834619257 0.8757492984593263 1.18375273472847 0.4270533164589724 0.15752689857797916 0.21186377079950594 6.264604774767699 0.043747277710816664 0.06810218204403651 4.548984013446612e-06 5.342085589414081 0.3080034362691437 GAPHRHS(ph)MPELGLR ddPTM_KYSE-520_SHP099_60min_R1 4 GAPHRHSMPELGLR 14 1 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 GAPHRHS(1)MPELGLR;GAPHRHS(1)MPELGLR;GAPHRHS(1)MPELGLR;GAPHRHS(1)MPELGLR 152.9 1.1937000000000001e-06 3583330000.0 2322640.0 2435860.0 2475090.0 2528440.0 2605190.0 2463850.0 2500280.0 2432400.0 3077530.0 2194260.0 True False 2193798.529131947 2318837.6292996006 2634638.2616840233 2768742.177396795 2810203.6314965556 2448472.1982312454 2753032.7027812866 2423962.572126427 2518728.1302179573 2174820.56350845 1.0087262213453057 1.066220206028777 1.2114278786447508 1.2730899384776013 1.2921542487914943 1.1258272242383698 1.2658665956055044 1.1145575008800073 1.1581314672483651 1.0 21.052464943703693 -4.645395311993974 4.069674545245756 1.192583019138101 1.0211117274205013 0.3130308383538729 0.08449078226808096 0.22301456856922577 6.513789678273865 0.021407969526636112 0.06381988579774699 2.262583876765887e-05 4.645395311993974 -0.17147129171759978 GAPHSS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 6 GAPHSSPAR 9 0 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 GAPHS(0.061)S(0.939)PAR;GAPHS(0.029)S(0.971)PAR;GAPHS(0.017)S(0.983)PAR;GAPHS(0.202)S(0.798)PAR;GAPHS(0.331)S(0.669)PAR;GAPHS(0.144)S(0.856)PAR 148.28 0.0002002 968228000.0 483224.0 387139.0 351326.0 363937.0 345960.0 391781.0 418785.0 302542.0 400887.0 498372.0 True False 456418.60143683857 368540.2613325141 373973.03610147507 398525.46305835154 373185.0837568651 389335.7494552172 461119.87474773265 301492.5524158336 328096.02633887815 493956.8118075488 0.9240050760038196 0.7460981456737186 0.7570966269965708 0.806802241677804 0.7555014423047622 0.7881979560733476 0.9335226556757966 0.6103621717707954 0.6642200664027043 1.0 18.914025382411015 -7.265277848385518 24.97407392785191 0.7279683574857589 0.8072064920385955 0.02767223292543386 0.11435650252143915 849.8582114843831 5529342.576073123 0.05690094117709617 0.028938961715503555 5.4290288762584217e-08 7.265277848385518 0.07923813455283657 GAPS(ph)SPATGVLPSPQGK ddPTM_KYSE-520_SHP099_60min_R1 1 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 GAPS(0.5)S(0.5)PAT(0.001)GVLPSPQGK 115.12 0.00013547 1351900000.0 1622000.0 2101600.0 1219000.0 1152200.0 1436800.0 2385500.0 1629900.0 1942400.0 2150900.0 2463800.0 True False 1532024.426623161 2000635.9814340891 1297578.6904689597 1261704.7415784388 1549867.9857262813 2370611.2096437057 1794666.1982910815 1935662.267759568 1760350.7797765757 2441972.648807394 0.6273716568329987 0.819270429753239 0.5313649565660241 0.5166743952659043 0.6346786834337408 0.9707771341343485 0.734924774512752 0.7926633693890484 0.7208724391881672 1.0 21.21961561090628 -6.154588662045006 9.042494200462938 0.8239017681007991 0.6244201583978153 0.4726685109449269 0.11417909516211032 0.3581076823872754 27.818835593626552 0.038331767824665144 0.03835187653384336 7.005051588052583e-07 6.154588662045006 -0.1994816097029838 GAPSPGVLGPHAS(ph)EPQLAPPACTPAAPAVPGPPGPR ddPTM_KYSE-520_SHP099_60min_R1 1 GAPSPGVLGPHASEPQLAPPACTPAAPAVPGPPGPR 36 0 O96013;O96013-4;O96013-3;M0R0L9 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 GAPSPGVLGPHAS(1)EPQLAPPACTPAAPAVPGPPGPR 156.17 1.1564999999999999e-07 462390000.0 107630.0 119800.0 114860.0 119400.0 85071.0 98033.0 78280.0 141670.0 121250.0 130960.0 True False 101659.54934491427 114044.62817653384 122264.05938249797 130747.74010108112 91765.60371222199 97421.13968350503 86193.30633917781 141178.5798360267 99234.05646376405 129799.79628533813 0.783202687941333 0.8786194696779815 0.9419433842078273 1.0073031225230826 0.7069780256857584 0.7505492494714299 0.6640480864060802 1.0876641094695916 0.7645162727807245 1.0 16.985928593533778 -8.788792907533074 0.8809210602588783 1.0006598412767684 0.8426012103087667 0.11089402347430644 0.12962201284735644 9.135850497428983 8.264908245173567 0.16914081231437347 0.04341178707548431 1.6263240803091091e-09 8.788792907533074 -0.15805863096800177 GAPSS(ph)PATGVLPS(ph)PQGK ddPTM_KYSE-520_SHP099_60min_R1 4 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 2 GAPS(0.012)S(0.988)PATGVLPS(1)PQGK;GAPS(0.433)S(0.567)PATGVLPS(1)PQGK;GAPS(0.052)S(0.948)PATGVLPS(1)PQGK;GAPS(0.1)S(0.9)PATGVLPS(1)PQGK 266.7 1.3871e-29 1140010000.0 2181420.0 1894500.0 1916610.0 1761790.0 1969180.0 2055610.0 1998020.0 2040110.0 2350520.0 2104300.0 True False 2060412.2840470402 1803485.376297524 2040157.7472844254 1929229.9918985234 2124143.262898442 2042780.1755001885 2199999.3603960625 2033033.3345752552 1923724.8197872706 2085657.5391206257 0.9878957812583988 0.864708295810599 0.9781844377694987 0.9249984504704177 1.0184525613893654 0.9794418005755079 1.0548229127412962 0.9747685305193687 0.9223589125750574 1.0 20.992070858930397 -5.752594147387441 24.998633142682966 0.99292837083931 0.9364466796096389 0.25186605644143767 0.04437415326259669 261.27018815874385 738405.1247555672 0.01299042473450063 0.016518191841682472 1.7676889723890145e-06 5.752594147387441 -0.05648169122967106 GAPSS(ph)PATGVLPSPQGK ddPTM_KYSE-520_SHP099_60min_R1 6 GAPSSPATGVLPSPQGK 17 0 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 GAPS(0.022)S(0.978)PATGVLPSPQGK;GAPS(0.011)S(0.989)PATGVLPSPQGK;GAPS(0.095)S(0.904)PAT(0.001)GVLPSPQGK;GAPSS(1)PATGVLPSPQGK;GAPS(0.026)S(0.974)PATGVLPSPQGK;GAPS(0.16)S(0.84)PATGVLPSPQGK 285.75 1.8089000000000001e-37 4259090000.0 3937070.0 5227190.0 3416250.0 3036420.0 3504860.0 5762930.0 3962910.0 4958350.0 5394680.0 5758870.0 True False 3718672.8787455303 4976067.946227849 3636466.9411932626 3325000.4438670403 3780672.5420744787 5726961.416219657 4363519.61707449 4941150.641137594 4415142.100815985 5707850.892133067 0.6515014055238983 0.8717936120381475 0.6370991481584214 0.5825310623390273 0.6623635784328649 1.003348112003579 0.7644768056377537 0.8656761948613287 0.7735209248197465 1.0 22.44451621668341 -6.234785195942063 24.650857612437083 0.86570120757903 0.6837383224898859 0.48547800423333465 0.10247216685994102 619.5384599402981 572974.1901609715 0.03411607197522347 0.03410644283908876 5.823911999254806e-07 6.234785195942063 -0.18196288508914416 GAPVNIS(ph)SSDLTGR ddPTM_KYSE-520_SHP099_60min_R1 8 GAPVNISSSDLTGR 14 0 P48730-2;H7BYT1;P48730;J3KRM8 P48730-2 CSNK1D Casein kinase I isoform delta 1 GAPVNIS(0.807)S(0.145)S(0.048)DLTGR;GAPVNIS(0.857)S(0.106)S(0.038)DLTGR;GAPVNIS(0.918)S(0.081)S(0.002)DLTGR;GAPVNIS(0.403)S(0.403)S(0.194)DLTGR;GAPVNIS(0.477)S(0.477)S(0.046)DLTGR;GAPVNIS(0.98)S(0.019)S(0.001)DLTGR;GAPVNIS(0.358)S(0.358)S(0.284)DLTGR;GAPVNIS(0.973)S(0.026)S(0.001)DLTGR 263.06 1.0716e-24 6960100000.0 5605820.0 6034120.0 5113960.0 4019780.0 4097840.0 5420940.0 4270400.0 4958870.0 6056450.0 5453530.0 True False 5294853.989674883 5744231.817801223 5443614.044225308 4401818.682609078 4420316.694479805 5387105.902664411 4702093.707087692 4941668.837378964 4956751.350680115 5405215.96698214 0.979582318637885 1.0627201304980167 1.0071038932537983 0.8143649966065495 0.817787248739253 0.9966495206799589 0.869917823045465 0.9142407754963423 0.9170311382484104 1.0 22.365920831737295 -5.109671378568107 7.5150101945472185 0.8997139866220164 1.0244516336582732 0.4075199064601217 0.061923292132435664 0.2411781389384797 14.645406993426656 0.0167532815186227 0.029232224302893944 7.76834708654594e-06 5.109671378568107 0.12473764703625678 GAPVNISSS(ph)DLTGR ddPTM_KYSE-520_SHP099_60min_R1 4 GAPVNISSSDLTGR 14 0 P48730-2;H7BYT1;P48730;J3KRM8 P48730-2 CSNK1D Casein kinase I isoform delta 1 GAPVNIS(0.006)S(0.103)S(0.886)DLT(0.004)GR;GAPVNISS(0.03)S(0.97)DLTGR;GAPVNIS(0.028)S(0.36)S(0.613)DLTGR;GAPVNIS(0.002)S(0.112)S(0.886)DLTGR 216.98 7.2194e-14 2622110000.0 3428660.0 3356570.0 3366070.0 2971810.0 3133460.0 3210180.0 3029040.0 3366200.0 3918890.0 3644560.0 True False 3238465.394935743 3195315.338885715 3583052.2581024244 3254249.928892741 3380045.4750514184 3190144.075864193 3335244.92378159 3354523.4378769873 3207318.3631775696 3612272.033824772 0.8965175835627107 0.8845721775561926 0.9919109703121088 0.9008872804762305 0.9357117745843007 0.8831405957226266 0.9233094552544377 0.928646404940086 0.8878950237259882 1.0 21.784475113048753 -10.951652164748142 3.170828811317901 1.0589763440442885 0.9160574252093724 0.39903513310800187 0.03135446722762828 2987354.971931611 12120585.755960276 1206756.9886457007 0.007400348041148738 1.1177581245043918e-11 10.951652164748142 -0.14291891883491614 GAQASS(ph)GSPALPR ddPTM_KYSE-520_SHP099_60min_R1 2 GAQASSGSPALPR 13 0 P42684-4;P42684-7;P42684-10;P42684-5;P42684-2;P42684-6;P42684-3;P42684 P42684-4 ABL2 Abelson tyrosine-protein kinase 2 1 GAQAS(0.085)S(0.576)GS(0.338)PALPR;GAQAS(0.259)S(0.475)GS(0.265)PALPR 157.35 1.9554e-06 1518740000.0 1232940.0 1279390.0 1138800.0 957390.0 1000230.0 1210560.0 975120.0 1191280.0 1354770.0 1218600.0 True False 1164546.3603950457 1217926.183996458 1212208.870144425 1048380.0577502006 1078942.4104697926 1203004.4460055674 1073694.6458541008 1187147.7277268416 1108777.9189724831 1207804.152056454 0.9641847632434812 1.0083805242122823 1.0036468810613637 0.86800501220764 0.8933090755092566 0.9960260891281799 0.888964195085757 0.9828975382354482 0.918011349012698 1.0 20.203955106964298 -5.205975093976316 24.999085331012953 0.9334513844400908 0.9937017591560303 0.25101414015809487 0.04481852806094793 395.7808841693879 178386.94019968584 0.011848179163642326 0.020521634014619712 6.223359740178928e-06 5.205975093976316 0.060250374715939525 GAQASSGS(ph)PALPR ddPTM_KYSE-520_SHP099_60min_R1 2 GAQASSGSPALPR 13 0 P42684-4;P42684-7;P42684-10;P42684-5;P42684-2;P42684-6;P42684-3;P42684 P42684-4 ABL2 Abelson tyrosine-protein kinase 2 1 GAQAS(0.344)S(0.216)GS(0.44)PALPR;GAQAS(0.004)S(0.361)GS(0.635)PALPR 158.65 1.2015e-06 2306000000.0 1107890.0 1198170.0 1010130.0 947570.0 940380.0 1131240.0 879200.0 1096570.0 1383450.0 1061020.0 True False 1046433.133176039 1140608.114710164 1075244.596065144 1037626.7679026901 1014382.5559697117 1124179.5115478272 968078.1161651142 1092766.254611362 1132250.353936449 1051620.188261069 0.9950675584750736 1.084619834653653 1.022464772042024 0.9866934654596942 0.9645902268641948 1.0689976515254433 0.9205587026299888 1.0391263564636688 1.076672325783996 1.0 20.004182312498287 -10.607787022226503 13.167860713278616 0.9999998865641515 1.0165712850391728 0.010758182596643073 0.049809907941144746 1.64587378903996e-07 4.901660866094425e-09 0.04786155639129099 0.011608052926354251 2.4672489781394734e-11 10.607787022226503 0.016571398475021315 GAQPGRHS(ph)VTGYGDCAVGAR ddPTM_KYSE-520_SHP099_60min_R1 12 GAQPGRHSVTGYGDCAVGAR 20 1 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GAQPGRHS(0.955)VT(0.037)GY(0.008)GDCAVGAR;GAQPGRHS(0.942)VT(0.053)GY(0.005)GDCAVGAR;GAQPGRHS(0.5)VT(0.5)GYGDCAVGAR;GAQPGRHS(0.862)VT(0.138)GYGDCAVGAR;GAQPGRHS(0.978)VT(0.022)GYGDCAVGAR;GAQPGRHS(1)VTGYGDCAVGAR;GAQPGRHS(1)VTGYGDCAVGAR;GAQPGRHS(0.999)VT(0.001)GYGDCAVGAR;GAQPGRHS(0.996)VT(0.004)GYGDCAVGAR;GAQPGRHS(0.995)VT(0.005)GYGDCAVGAR;GAQPGRHS(0.971)VT(0.029)GYGDCAVGAR;GAQPGRHS(0.986)VT(0.014)GYGDCAVGAR 278.76 2.5611e-36 46541510000.0 8358978.0 7604713.0 8185363.0 6959218.0 6192398.0 6982512.0 6207241.0 7334076.0 8697017.0 7289365.0 True False 7895288.8271304825 7239371.172573067 8713004.596023861 7620619.986354804 6679704.492675015 6938931.552576687 6834729.497114255 7308635.802142204 7117857.946757238 7224786.897140163 1.092805772618114 1.0020186443753347 1.2059877640782444 1.05478820273181 0.9245538432862411 0.9604340794222418 0.9460112241953729 1.0116057270886747 0.9851997087380874 1.0 22.784523603723205 -5.581563739837714 6.268233509228063 0.9708960506699185 1.0968509528020352 0.56613331941409 0.05153433501497219 0.14625742524731467 11.540036952320804 0.015283902426993842 0.01988840128098511 2.620814362917692e-06 5.581563739837714 0.1259549021321167 GAS(ph)PPISAIEEFSIIPEAPMR ddPTM_KYSE-520_SHP099_60min_R1 17 GASPPISAIEEFSIIPEAPMR 21 0 A0A2R8YFR7;A0A2R8YF49;A0A5F9ZGZ6;C9J591;Q12774;A0A5F9ZH52 A0A2R8YFR7;Q12774;A0A5F9ZH52 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 GAS(1)PPISAIEEFSIIPEAPMR;GAS(1)PPISAIEEFSIIPEAPMR;GAS(0.867)PPIS(0.133)AIEEFSIIPEAPMR;GAS(0.998)PPIS(0.002)AIEEFSIIPEAPMR;GAS(0.992)PPIS(0.008)AIEEFSIIPEAPMR;GAS(0.981)PPIS(0.019)AIEEFSIIPEAPMR;GAS(1)PPISAIEEFSIIPEAPMR;GAS(1)PPISAIEEFSIIPEAPMR;GAS(0.852)PPIS(0.148)AIEEFSIIPEAPMR;GAS(1)PPISAIEEFSIIPEAPMR;GAS(1)PPISAIEEFSIIPEAPMR;GAS(1)PPISAIEEFSIIPEAPMR;GAS(0.996)PPIS(0.004)AIEEFSIIPEAPMR;GAS(0.877)PPIS(0.123)AIEEFSIIPEAPMR;GAS(0.998)PPIS(0.002)AIEEFSIIPEAPMR;GAS(0.946)PPIS(0.054)AIEEFSIIPEAPMR;GAS(1)PPISAIEEFSIIPEAPMR 320.5 5.576199999999999e-54 6552907900.0 838779.5 1100629.0 832670.8 621823.6 671906.3 951559.0 643011.7 808751.0 1078295.0 978354.0 True False 792250.7290695214 1047753.1307621899 886346.0920883854 680921.5279859168 724781.5031861068 945619.9673181105 708013.59782544 805945.6315449022 882503.8096049018 969686.5447078953 0.8170173479185235 1.0805070323810784 0.9140542342529718 0.7022078750108213 0.7474389607050155 0.9751810752442333 0.730146872398564 0.8311403679295997 0.910091837843067 1.0 19.887158939799807 -5.01014418341123 24.861774203958152 0.830338086498397 0.9608918035556077 0.12884700745003141 0.11156232261810596 697.143636603001 1708601.9800052694 0.028646809956760354 0.054416017585481695 9.76912837351351e-06 5.01014418341123 0.13055371705721064 GASFLFPPAESLS(ph)PEEPR ddPTM_KYSE-520_SHP099_60min_R1 1 GASFLFPPAESLSPEEPR 18 0 P27987-2;P27987 P27987-2 ITPKB Inositol-trisphosphate 3-kinase B 1 GASFLFPPAES(0.095)LS(0.905)PEEPR 178.12 6.6559000000000006e-09 85395000.0 92958.0 119400.0 97118.0 75051.0 76048.0 115190.0 79111.0 102380.0 118260.0 116740.0 True False 87801.43443282116 113663.84477694628 103378.38167429405 82183.82447509408 82032.54494606913 114471.05648243912 87108.31192895623 102024.86767567162 96786.96509199787 115705.7744223456 0.7588336439660402 0.982352396364023 0.8934591397050378 0.710282826292742 0.708975376169529 0.989328813137713 0.7528432557825178 0.8817612447176891 0.8364920901761491 1.0 16.820101339941864 -9.169737372389088 0.8015843287808793 1.005600800985952 0.834130475180297 0.20647426395248814 0.09743935757637204 14.885808072478683 8.46345168984041 0.3706711186457023 0.033538333317983345 6.764919415693082e-10 9.169737372389088 -0.17147032580565502 GATKES(ph)SEKDR ddPTM_KYSE-520_SHP099_60min_R1 4 GATKESSEKDR 11 2 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BNI3;H3BP82;H3BTR6;H3BUG0;H3BTY0;H3BNU7;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 GAT(0.019)KES(0.49)S(0.49)EKDR;GAT(0.004)KES(0.498)S(0.498)EKDR;GAT(0.037)KES(0.958)S(0.005)EKDR;GAT(0.008)KES(0.797)S(0.195)EKDR 116.63 0.0001597 3063120000.0 2054900.0 2853120.0 1256950.0 1450290.0 2285060.0 2572250.0 2537010.0 1695420.0 1899370.0 8275900.0 True False 1940910.6006584063 2716051.8325795704 1337975.0081911068 1588125.1255544105 2464881.2217870955 2556195.633622311 2793475.729631542 1689538.9837340007 1554492.2872212757 8202581.964552769 0.236621908692409 0.33112157175836987 0.16311632288139621 0.19361283220545059 0.30050065118995595 0.3116330497724789 0.34056053834066763 0.2059764828971288 0.18951255762380323 1.0 22.9676466743145 -10.736244710103731 2.6869769153685144 1.1457151557992935 0.254837914855745 0.9303776513583304 0.06134033641499066 9343100.771950858 7593383.639128082 9095531.12208333 0.016671647330105028 1.8355038082235793e-11 10.736244710103731 -0.8908772409435486 GATYGKPVHHGVNQLK ddPTM_KYSE-520_SHP099_60min_R1 1 GATYGKPVHHGVNQLK 16 1 A0A2R8YEM3;E7EQV9;E7ENU7;P61313;E7EX53;A0A2R8Y738;P61313-2 A0A2R8YEM3 RPL15 Ribosomal protein L15;60S ribosomal protein L15 0 176.23 2.0153e-08 2412000000.0 3665700.0 2871800.0 2260200.0 2360700.0 3357800.0 2822200.0 2231200.0 2566000.0 2519000.0 1846200.0 False True 3462356.3136082175 2733834.417340316 2405896.108447866 2585060.2182296626 3622039.756731419 2804585.6029580636 2456751.470413557 2557099.144908901 2061613.0988224442 1829844.1043218637 1.8921591765279695 1.4940258631231698 1.3148093341752116 1.4127215603362453 1.9794253227237295 1.532691007028403 1.3426015170423622 1.3974409835621249 1.126660513840043 1.0 20.803289311001688 -7.572894362264954 1.049560113901746 1.0040101158566719 1.588624473810928 0.524521141667837 0.19812744586971603 0.44109853965602897 0.9179253292606462 0.19470547150784595 0.06910311559294802 2.673656669486763e-08 7.572894362264954 0.5846143579542562 GAVAAEGAS(ph)DTER ddPTM_KYSE-520_SHP099_60min_R1 3 GAVAAEGASDTER 13 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.998)DT(0.002)ER;GAVAAEGAS(1)DTER;GAVAAEGAS(1)DTER 139.89 1.2318e-05 174924000.0 621365.0 543293.0 499494.0 537833.0 536146.0 570120.0 616100.0 574528.0 569931.0 542801.0 True False 586896.6447895821 517192.3887805814 531692.1824586578 588948.4866146123 578337.6399465504 566561.6696047245 678381.4005565596 572535.096463843 466445.89719133603 537992.2054327873 1.0909017618897539 0.9613380706222807 0.9882897504638353 1.0947156495340546 1.0749926004621335 1.0531038626274418 1.2609502399962027 1.064207047392569 0.8670123702184571 1.0 19.037225745239297 -3.9537257717023704 15.035446103638622 1.0494801029173177 1.2964309634463331 0.01618616948794227 0.09741807171048168 1620518.0072539505 15193227.428724252 0.0252551637858713 11198553.103314737 0.00011124339341574931 3.9537257717023704 0.24695086052901538 GAVAAEGAS(ph)DTEREEPTESQGLAAR ddPTM_KYSE-520_SHP099_60min_R1 7 GAVAAEGASDTEREEPTESQGLAAR 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.948)DT(0.051)EREEPT(0.001)ESQGLAAR;GAVAAEGAS(0.994)DT(0.006)EREEPTESQGLAAR;GAVAAEGAS(0.974)DT(0.026)EREEPTESQGLAAR;GAVAAEGAS(0.98)DT(0.02)EREEPTESQGLAAR;GAVAAEGAS(0.998)DT(0.002)EREEPTESQGLAAR;GAVAAEGAS(1)DTEREEPTESQGLAAR;GAVAAEGAS(0.986)DT(0.014)EREEPTESQGLAAR 263.59 6.2909e-38 7264710000.0 4177480.0 4113860.0 3921030.0 3440684.0 3604760.0 4020400.0 3577464.0 3746319.0 4622240.0 4070490.0 True False 3945746.856800078 3916223.9905702537 4173785.867669815 3767685.572880633 3888434.103721239 3995307.1923083435 3939108.973804041 3733323.893786431 3782957.7331881966 4034428.6253933012 0.9780187538738331 0.970701022177205 1.0345420021559877 0.9338833135295176 0.9638128381418993 0.9903031044250674 0.9763734445593351 0.9253662018676766 0.9376687715771426 1.0 21.943932936090974 -5.281095658919246 24.998332324126302 0.9599199441718986 0.9920486468275886 0.23225739773967446 0.02764172120969203 1250.8481945594897 1590793.3776039262 0.008022776580228281 0.0119151657175425 5.23485119587227e-06 5.281095658919246 0.03212870265569001 GAVAAEGASDT(ph)EREEPTESQGLAAR ddPTM_KYSE-520_SHP099_60min_R1 1 GAVAAEGASDTEREEPTESQGLAAR 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 GAVAAEGAS(0.327)DT(0.673)EREEPTESQGLAAR 142.32 3.9242000000000005e-06 535020000.0 82302.0 67718.0 65585.0 57769.0 66964.0 47714.0 53237.0 67820.0 71759.0 73500.0 True False 77736.54399503053 64464.725633209695 69812.71403971028 63259.34839111679 72233.68582695903 47416.19922739036 58618.71550305063 67584.74824930693 58729.374497181394 72848.84718213466 1.0670936741205497 0.8849107175579153 0.958322838866159 0.8683644400433342 0.9915556473579106 0.6508846887973628 0.8046622255599152 0.9277394339588301 0.8061812474581491 1.0 16.152618521670714 -1.0000001367594995 0.6070571817534178 0.850882036038566 14.19941040824975 0.24805613008569194 0.09943482338708702 247.1189958071024 1.8692943899103682 0.04421133101897447 4383.958875131677 0.09999996850996647 1.0000001367594995 13.348528372211184 GAWSNVLR ddPTM_KYSE-520_SHP099_60min_R1 1 GAWSNVLR 8 0 P05141;P12236;P12235 P05141 SLC25A5;SLC25A6;SLC25A4 ADP/ATP translocase 2;ADP/ATP translocase 2, N-terminally processed;ADP/ATP translocase 3;ADP/ATP translocase 3, N-terminally processed;ADP/ATP translocase 1 0 96.19 0.025419999999999998 260990000.0 232580.0 342030.0 222090.0 295250.0 366710.0 350350.0 309400.0 316840.0 365230.0 184110.0 False True 219678.32376326478 325598.3654025031 236406.27675656427 323310.47122985095 395567.9907055157 348163.335694266 340677.1714530093 315740.9559910121 298913.43869905616 182478.92863541257 1.2038558391702063 1.7843066475529288 1.2955264398164947 1.7717687935126778 2.1677461264355005 1.9079645978735766 1.8669397831333836 1.7302872082390022 1.6380709867947343 1.0 17.477370355918293 -8.306697993575245 2.6363824382649996 1.0000546791040361 1.73199969234507 0.38885156837698087 0.26700696583527345 2.3985069132403893 19.210114360226772 0.27059858334421677 0.07282303985077215 4.93516874065675e-09 8.306697993575245 0.7319450132410339 GCDS(ph)PDPDTSYVLTPHTEEK ddPTM_KYSE-520_SHP099_60min_R1 4 GCDSPDPDTSYVLTPHTEEK 20 0 Q02078-3;Q02078-5;Q02078 Q02078-3 MEF2A Myocyte-specific enhancer factor 2A 1 GCDS(1)PDPDTSYVLTPHTEEK;GCDS(1)PDPDTSYVLTPHTEEK;GCDS(1)PDPDTSYVLTPHTEEK;GCDS(0.968)PDPDT(0.014)S(0.005)Y(0.013)VLTPHTEEK 259.6 2.2190999999999997e-35 3420720000.0 2264880.0 2310011.0 2072287.0 2000144.0 2246329.0 1936163.0 1901674.0 1930140.0 2426330.0 2033910.0 True False 2139242.5914736567 2199034.604162799 2205869.935796434 2190237.084394778 2423102.312436337 1924078.6885338034 2093913.7664697166 1923444.7948380646 1985769.6348018511 2015891.1397580355 1.0611895400911513 1.0908498781470641 1.0942406027248086 1.0864857934033427 1.2020005766418411 0.9544556502018 1.0387037896902735 0.954141201825478 0.9850579704617384 1.0 20.94298630321575 -6.283306214680452 24.9685862896307 0.9868700459420592 1.1042153119745637 0.6808872019792991 0.041218851229891926 479.59920888762866 547627.2125305441 0.014350517253583262 0.01266672865492922 5.208273538696945e-07 6.283306214680452 0.1173452660325045 GCEIS(ph)PALFEAPRGYS(ph)MMGGQREAAT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 GCEISPALFEAPRGYSMMGGQREAATR 27 2 K7EKP0;Q86YJ7-2;Q86YJ7 K7EKP0 ANKRD13B Ankyrin repeat domain-containing protein 13B 3 GCEIS(1)PALFEAPRGY(0.484)S(0.525)MMGGQREAAT(0.991)R;GCEIS(1)PALFEAPRGY(0.525)S(0.553)MMGGQREAAT(0.923)R;GCEIS(0.999)PALFEAPRGY(0.191)S(0.824)MMGGQREAAT(0.985)R 43.888000000000005 0.042901 85446000.0 16090.8 16792.1 15145.600000000002 13735.4 14740.599999999999 17179.7 14303.3 17502.300000000003 20505.0 13435.0 True False 15198.211247785446 15985.382310544035 16121.909609816817 15040.808286301408 15900.60135745881 17072.475119813862 15749.217150755772 17441.588606367543 16781.808888985415 13315.976352271842 1.1413516249743472 1.2004664087449182 1.2107193031374117 1.1295310151054219 1.1940995490537953 1.2821046439378156 1.1827309341885992 1.3098242400672204 1.2602762610135054 1.0 13.700870593072793 -6.0084193870813545 23.846733513931195 1.2263093141953825 1.1738138304762913 0.014971066915249187 0.08333290610589597 575.1471563445787 1629033.0111723947 0.02492576789893309 0.026917782582719388 9.80800351729181e-07 6.0084193870813545 -0.052495483719091185 GCGFPVGEHS(ph)PHSR ddPTM_KYSE-520_SHP099_60min_R1 2 GCGFPVGEHSPHSR 14 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GCGFPVGEHS(1)PHSR;GCGFPVGEHS(1)PHSR 213.94 3.9993e-13 548470000.0 1148190.0 1239040.0 1161950.0 1074250.0 1142650.0 1152230.0 937550.0 1048700.0 1171590.0 1141660.0 True False 1084497.6118399822 1179514.6585630444 1236851.156185733 1176346.397014961 1232570.0542108417 1145038.5051719837 1032326.703606234 1045062.304468419 958858.7893804634 1131545.7805980397 0.9584213298615353 1.0423923439842198 1.0930632921736827 1.0395924028749801 1.089279881861615 1.0119241526107878 0.9123154549351359 0.9235705018634661 0.8473884184108675 1.0 20.10986352432726 -6.674063680429517 3.788597656791242 0.9136371084130582 1.0471789348684122 0.587386043991498 0.0489260165583105 0.15095262256651137 4.169369680356367 0.019687353082581006 0.014578164679465844 2.1180505435577556e-07 6.674063680429517 0.13354182645535395 GCHLLVAT(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 1 GCHLLVATPGR 11 0 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;A0A2R8Y7T2;O15523-2;A0A2R8YDH3;O15523;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5 A0A0D9SG12;A0A2R8Y5G6 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 1 GCHLLVAT(1)PGR 121.76 0.00028721 230900000.0 173460.0 161550.0 157690.0 127780.0 138790.0 144780.0 129800.0 136430.0 179230.0 170590.0 True False 163837.82801606294 153788.89550850616 167854.9497129209 139924.1727815423 149711.98339292232 143876.37431658572 142921.45072592318 135956.75617300154 146686.35002062202 169078.70531701166 0.9690033272308158 0.9095698670046113 0.9927622133029923 0.8275682766744251 0.8854573561597956 0.8509431985939732 0.8452953933965527 0.8041033666427206 0.8675625339429621 1.0 17.36733544484057 -5.264610081835153 24.99926874192474 0.8595245697479775 0.9523576098032009 0.355374861884556 0.05345998065422278 268.86644877620944 2119868.6588119725 0.013950506344128614 0.02172852672815568 5.437382913885793e-06 5.264610081835153 0.09283304005522341 GCIS(ph)MPEQK ddPTM_KYSE-520_SHP099_60min_R1 1 GCISMPEQK 9 0 B4DF87;B4DZ85;Q13772;Q13772-3;Q13772-4;Q13772-2 B4DF87 NCOA4 Nuclear receptor coactivator 4 1 GCIS(1)MPEQK 122.69 0.00091147 0.0 271880.0 261550.0 197640.0 215750.0 239130.0 251470.0 218030.0 236450.0 278150.0 234240.0 True False 256798.27442065658 248984.7454054462 210380.190635181 236254.81513239726 257948.17053641807 249900.48245193975 240070.60016774308 235629.81013784464 227644.97159089457 232164.81583596233 1.106103323606533 1.072448228250779 0.9061674133423671 1.0176167921125685 1.1110562537549753 1.0763925685815747 1.0340524652855523 1.0149247175520797 0.9805317432411408 1.0 17.824789825343668 -7.410070587115649 2.656255870253863 0.9912895392486422 1.0447092348105869 0.14615070417277143 0.05494531211331327 0.6746543909146359 8.954551471419057 0.04354841113499898 0.016632227097854974 3.889819175202888e-08 7.410070587115649 0.0534196955619447 GCRLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 GCRLSPR 7 1 B4E1E0;P17812-2;P17812;A0A3B3IRI2 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 GCRLS(1)PR;GCRLS(1)PR;GCRLS(1)PR;GCRLS(1)PR;GCRLS(1)PR;GCRLS(1)PR;GCRLS(1)PR;GCRLS(1)PR 82.645 0.007654300000000001 117093700000.0 5853470.0 5151240.0 5449490.0 4758860.0 4972490.0 4772990.0 4350960.0 4594980.0 5758730.0 4698460.0 True False 5528766.350496841 4903766.69823113 5800772.84489229 5211140.623596566 5363796.673402058 4743199.9989592545 4790797.4980775295 4579041.086856395 4713089.797769666 4656835.299746567 1.1872368238571214 1.0530255812349647 1.2456469837376423 1.1190304763151415 1.1518115475748014 1.0185457920784502 1.0287667889689491 0.9832946179362612 1.0120799844534247 1.0 22.150918427982162 -6.28445613543918 4.535014316329644 1.007174931820882 1.1500330233882166 0.698003009081751 0.04698927480199934 0.11599401650087857 6.1462965369623666 0.01600029728003568 0.014607452790992256 5.19450136299877e-07 6.28445613543918 0.14285809156733453 GCTSSSSLS(ph)PPRGDR ddPTM_KYSE-520_SHP099_60min_R1 3 GCTSSSSLSPPRGDR 15 1 Q96LT9-2;Q96LT9;X6RLP6 Q96LT9-2 RNPC3 RNA-binding protein 40 1 GCTSS(0.001)S(0.004)S(0.045)LS(0.949)PPRGDR;GCTSSSSLS(1)PPRGDR;GCTSSSSLS(1)PPRGDR 138.66 8.3379e-06 1400720000.0 714130.0 742200.0 731240.0 608890.0 649100.0 752480.0 700630.0 776220.0 839690.0 631830.0 True False 674515.7853171392 706543.5979350881 778376.9004253668 666758.722530547 700180.4771262038 747783.4932017163 771456.5178898578 773527.4739911095 687223.4628623343 626232.4777563013 1.0771012511740528 1.1282448979116027 1.242951983605476 1.0647143771901535 1.1180839416614854 1.1940988686516458 1.2319011633728625 1.2352081718318801 1.0973935196151992 1.0 19.25633880610554 -4.518975793775678 24.78640687895854 1.1589419796989202 1.0898871271530322 0.0556423832727615 0.07693875938895564 299.8264377267656 1904076.0877819282 0.019261275186826677 0.053659641620344166 3.027082143547758e-05 4.518975793775678 -0.06905485254588806 GDAASS(ph)PAPAASVGSSQGGAR ddPTM_KYSE-520_SHP099_60min_R1 8 GDAASSPAPAASVGSSQGGAR 21 0 E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2;F8WCC1 E7EXA6 CHTF18 Chromosome transmission fidelity protein 18 homolog 1 GDAAS(0.31)S(0.69)PAPAASVGSSQGGAR;GDAASS(1)PAPAASVGSSQGGAR;GDAAS(0.028)S(0.972)PAPAASVGSSQGGAR;GDAAS(0.198)S(0.801)PAPAASVGSSQGGAR;GDAASS(1)PAPAASVGSSQGGAR;GDAAS(0.003)S(0.997)PAPAASVGSSQGGAR;GDAASS(1)PAPAASVGSSQGGAR;GDAASS(1)PAPAASVGSSQGGAR 342.98 2.7441999999999997e-65 3066302000.0 2499712.0 3623763.0 2400790.0 1742481.0 2051160.0 3098833.0 2042681.0 2550857.0 3000300.0 3228434.0 True False 2361047.992307671 3449671.986100844 2555548.76479982 1908085.8703439825 2212574.6224960447 3079492.0337932645 2249175.130125419 2542008.6724414965 2455521.1514080944 3199832.5864436426 0.737866100342389 1.078078897225957 0.7986507718018171 0.5963080313725622 0.6914657447610858 0.9623916097485191 0.7029040018075435 0.7944192715615586 0.7673905071818802 1.0 21.60956499536628 -4.973805515995001 24.97032009422182 0.7727221501637198 0.9155706943714887 0.09996964870192115 0.13737389625494809 387.37730651918463 369269.2322643011 0.03466740051940701 0.07216311729015729 1.0621711078969499e-05 4.973805515995001 0.14284854420776893 GDALNLS(ph)SPKR ddPTM_KYSE-520_SHP099_60min_R1 1 GDALNLSSPKR 11 1 K7EIX9;K7EMC4;A0A0C4DGQ1;Q9BUG6-2;A6NJL1;Q9BUG6 K7EIX9 ZSCAN5A;ZSCAN5B Zinc finger and SCAN domain-containing protein 5A;Zinc finger and SCAN domain-containing protein 5B 1 GDALNLS(0.602)S(0.398)PKR 59.227 0.047553 0.0 1048900.0 955930.0 908690.0 803670.0 898730.0 914270.0 839650.0 882570.0 1111300.0 906880.0 True False 990715.4260696889 910005.6879198175 967265.6113554063 880050.5551678035 969454.9379257952 908563.7017987636 924530.0161943104 879508.5706633864 909515.9335932448 898845.7487419639 1.1022085017994545 1.0124158557722203 1.0761196931834007 0.9790896340106561 1.0785554020616517 1.0108115914998776 1.0285747220680461 0.9784866556852029 1.0118709855013666 1.0 19.777714029977645 -1.0000000000000002 0.26450246701519725 0.9982278695729206 1.550262814229773 0.3578899208641064 0.03284863570771363 58.295732043269375 0.8090171064718348 0.037196935622038796 14.592522648475935 0.09999999999999995 1.0000000000000002 0.5520349446568523 GDALNLSS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 5 GDALNLSSPKR 11 1 K7EIX9;K7EMC4;A0A0C4DGQ1;Q9BUG6-2;A6NJL1;Q9BUG6 K7EIX9 ZSCAN5A;ZSCAN5B Zinc finger and SCAN domain-containing protein 5A;Zinc finger and SCAN domain-containing protein 5B 1 GDALNLS(0.421)S(0.579)PKR;GDALNLS(0.051)S(0.949)PKR;GDALNLS(0.283)S(0.717)PKR;GDALNLS(0.184)S(0.816)PKR;GDALNLS(0.043)S(0.957)PKR 95.98100000000001 0.0014173 3976390000.0 2780110.0 2539700.0 2522030.0 2186990.0 2345420.0 2456820.0 2339740.0 2451820.0 2895380.0 2531550.0 True False 2625891.7562881154 2417688.999832582 2684604.089190678 2394840.8720574803 2529991.210385673 2441486.075068896 2576263.752861874 2443315.2086790903 2369651.9785901285 2509122.436516098 1.0465379122487743 0.9635595954374906 1.0699374610504202 0.954453571975827 1.0083171604405847 0.9730438178452883 1.0267588840499156 0.9737728112110858 0.9444146463734852 1.0 21.258751440328275 -1.0000000000259004 0.2986098271597844 0.9791809916710082 1.4046817681154182 0.15802965289918935 0.0362362501458549 108.08053367534731 1.540331291961532 0.03556400740981189 24.528352014565073 0.09999999999403622 1.0000000000259004 0.42550077644441 GDDDEES(ph)DEEAVK ddPTM_KYSE-520_SHP099_60min_R1 1 GDDDEESDEEAVK 13 0 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 GDDDEES(1)DEEAVK 196.37 8.5028e-06 0.0 972190.0 899040.0 751790.0 860500.0 910840.0 1016700.0 950370.0 1021500.0 1047500.0 1017300.0 True False 918260.682687283 855848.7689134481 800251.5863065304 942281.6612812405 982517.9260293199 1010354.3981742841 1046442.674317378 1017956.6549198928 857300.405326126 1008287.5134474235 0.9107131353314782 0.8488142097358977 0.7936740023392733 0.9345366760116832 0.9744422230024499 1.0020498961846644 1.0378415485276602 1.0095896669784292 0.8502539145753583 1.0 19.943475651693575 -5.489875786912613 4.138000333621751 0.9823579947858952 0.8510049862560923 0.5278153223735567 0.05392110409868054 0.1689939251554159 6.422391568547598 0.016241070167174715 0.023520765149035616 3.2368622157748252e-06 5.489875786912613 -0.13135300852980292 GDDDEES(ph)DEEAVKK ddPTM_KYSE-520_SHP099_60min_R1 5 GDDDEESDEEAVKK 14 1 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 GDDDEES(1)DEEAVKK;GDDDEES(1)DEEAVKK;GDDDEES(1)DEEAVKK;GDDDEES(1)DEEAVKK;GDDDEES(1)DEEAVKK 214.45 6.5478e-14 6563090000.0 11552520.0 9878410.0 8978940.0 10335060.0 10172700.0 10337200.0 11097700.0 11375300.0 11259630.0 11381260.0 True False 10911678.686222332 9403836.3558043 9557736.839211958 11317300.995050905 10973233.615254546 10272681.700410351 12219563.81911462 11335841.739314979 9215165.024173947 11280430.890886305 0.9673104504401604 0.8336415910673993 0.8472847297822508 1.0032685014004552 0.9727672392479306 0.9106639453560116 1.0832532850307217 1.0049121216170422 0.8169160480934351 1.0 23.427318841192204 -5.261465396446577 24.999997001444925 0.9727891678911379 0.8778351889568758 0.22833244564656308 0.07345190818451619 3.280418194235991 3153108.958907133 0.020381104587378792 0.032580950416470765 5.476897378416764e-06 5.261465396446577 -0.09495397893426205 GDDGIFDDNFIEER ddPTM_KYSE-520_SHP099_60min_R1 2 GDDGIFDDNFIEER 14 0 O60493-4;O60493;O60493-2 O60493-4 SNX3 Sorting nexin-3 0 ; 190.1 7.155000000000001e-10 260110000.0 177013.0 249060.0 496800.0 123054.0 262910.0 252110.0 167833.0 163011.0 340910.0 262740.0 False True 167193.73602333295 237094.7837533182 528824.5229081047 134749.01516246598 283599.5212467263 250536.487974544 184799.19753223326 162445.55288805338 279009.3376417469 260412.3280086268 0.6420346429136575 0.9104591382688452 2.0307200006698074 0.5174448390861207 1.089040305485581 0.9620761424407079 0.7096407414556477 0.6238013158988079 1.071413706775449 1.0 17.990438222233433 GDDLLPAGTEDYIHIR ddPTM_KYSE-520_SHP099_60min_R1 3 GDDLLPAGTEDYIHIR 16 0 K7EM18;P41567;O60739 K7EM18 EIF1;EIF1B Eukaryotic translation initiation factor 1;Eukaryotic translation initiation factor 1b 0 ;; 154.46 6.5213e-06 878400000.0 1476800.0 1412350.0 1016830.0 972420.0 1451660.0 1480210.0 1165620.0 1210220.0 1254850.0 1289910.0 False True 1394878.960072187 1344498.5860194296 1082376.4887855225 1064838.5044312673 1565897.383184446 1470971.460333979 1283452.2449549346 1206022.029287471 1027000.8721942608 1278482.4009347952 1.0910427543251948 1.0516363659260113 0.8466103936934253 0.8328925792429237 1.2248094944752466 1.1505605859403623 1.0038872995173853 0.9433231371864462 0.8032968396305986 1.0 20.28600087049126 -7.339079100108441 3.506436750173903 0.8961503098403965 1.0278909981330253 0.15601317788366742 0.12231519627813586 0.4975955773495595 11.764312752744432 0.08251435276052213 0.03630622162985165 4.5805845076396615e-08 7.339079100108441 0.13174068829262886 GDDQLELIKDDEK ddPTM_KYSE-520_SHP099_60min_R1 1 GDDQLELIKDDEK 13 1 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4 P07910;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 137.68 1.4932e-05 36999000.0 45369.0 36458.0 20571.0 68005.0 55447.0 44838.0 46065.0 42512.0 40037.0 38491.0 False True 42852.291129140736 34706.502955426346 21897.039574763738 74468.17475355117 59810.36344972515 44558.14941018839 50721.6997510759 42364.53579437539 32767.290050636853 38149.999685544884 1.1232579680826986 0.9097379617692818 0.5739722085256156 1.9519836269295519 1.5677683864408372 1.167972471231017 1.3295334251416642 1.1104727691630205 0.8589066925484785 1.0 15.2193954247177 -3.138654601487446 14.010303325935922 1.1775627049691393 1.1006616379017156 0.0 0.3676611379307426 0.0 0.0 0.08895783055175971 0.0 0.0007266836660746543 3.138654601487446 -0.07690106706742372 GDDQLELIKDDEKEAEEGEDDRDS(ph)ANGEDDS ddPTM_KYSE-520_SHP099_60min_R1 6 GDDQLELIKDDEKEAEEGEDDRDSANGEDDS 31 3 P07910;G3V2Q1;P07910-3;P07910-2;G3V2D6;G3V4C1;P07910-4 P07910;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 GDDQLELIKDDEKEAEEGEDDRDS(0.942)ANGEDDS(0.058);GDDQLELIKDDEKEAEEGEDDRDS(1)ANGEDDS;GDDQLELIKDDEKEAEEGEDDRDS(0.997)ANGEDDS(0.003);GDDQLELIKDDEKEAEEGEDDRDS(1)ANGEDDS;GDDQLELIKDDEKEAEEGEDDRDS(0.807)ANGEDDS(0.193);GDDQLELIKDDEKEAEEGEDDRDS(1)ANGEDDS 243.7 5.035899999999999e-31 54946100000.0 6444880.0 5402760.0 4913850.0 5737910.0 6093400.0 5675310.0 5954020.0 6234340.0 6839590.0 5603970.0 True False 6087369.658850243 5143203.299891905 5230604.6334379865 6283239.241234448 6572915.913296585 5639888.285140643 6555910.447235458 6212714.5296459 5597692.8680329565 5554323.185622684 1.095969653801807 0.9259820014083878 0.9417177320501191 1.1312340012008226 1.1833873711761174 1.0154051351818065 1.1803257081268468 1.1185367365239849 1.0078082749168313 1.0 22.40517969403764 -5.264104845955321 24.963867714306883 1.1003227777720945 0.9816990147168558 0.27054178317309563 0.07627759764695041 259.1823160257817 2427428.142853449 0.020784961977774942 0.032494403181910415 5.443712166565221e-06 5.264104845955321 -0.1186237630552387 GDEELDSLIK ddPTM_KYSE-520_SHP099_60min_R1 4 GDEELDSLIK 10 0 C9J0D1;A0A494C189;Q71UI9-2;Q71UI9;P0C0S5;C9J386;Q71UI9-3;Q71UI9-4 C9J0D1 H2AFV;H2AFZ Histone H2A;Histone H2A.V;Histone H2A.Z 0 ;;; 190.02 2.4791e-05 794215000.0 1105250.0 1433620.0 1420990.0 762840.0 1375860.0 1418970.0 1051750.0 1234470.0 1453920.0 1417160.0 False True 1043939.5792387499 1364746.7432925075 1512589.2890643887 835340.0842437905 1484132.3544274494 1410113.6818898031 1158071.1540908292 1230187.9116974638 1189924.7783405832 1404605.0649337946 0.7432264095444904 0.971623111267105 1.0768787090595349 0.5947152727113111 1.0566189681918905 1.0039218262083287 0.8244816874168216 0.8758247726776126 0.8471596807154257 1.0 20.421733111901567 GDFCIQVGR ddPTM_KYSE-520_SHP099_60min_R1 3 GDFCIQVGR 9 0 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;P15531;P15531-2;O60361 Q32Q12 NME1-NME2;NME2;NME1;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A;Putative nucleoside diphosphate kinase 0 ;; 171.73 0.0005688 981957000.0 833869.0 1111380.0 697437.0 566753.0 844230.0 897845.0 738148.0 763470.0 784150.0 809189.0 False True 787612.6242933596 1057987.6365846093 742394.904958656 620617.0347194967 910666.0979883762 892241.2163163073 812767.203470253 760821.7007652367 641768.1268128703 802020.214999515 0.9820358758586102 1.3191533290532447 0.925656100774349 0.773817197014008 1.1354652675293564 1.1124921786626625 1.0133998972466605 0.9486315762822722 0.8001894650663617 1.0 19.61327907484769 -7.333329441349003 3.2282395528765147 0.8953555697182769 1.041527709590209 0.13711070165322847 0.14167248338201463 0.520933015430487 10.551523773958154 0.09337497280637722 0.04052223192095757 4.6416304299781683e-08 7.333329441349003 0.146172139871932 GDFHS(ph)PIVLGRPPNTEDRESPS(ph)VKR ddPTM_KYSE-520_SHP099_60min_R1 1 GDFHSPIVLGRPPNTEDRESPSVKR 25 3 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 2 GDFHS(1)PIVLGRPPNT(0.001)EDRES(0.427)PS(0.571)VKR 118.86 0.00027482 667850000.0 150370.0 142930.0 131310.0 111360.0 119120.0 118300.0 98345.0 103720.0 173000.0 108740.0 True False 142028.67634483657 136063.4282576961 139774.45270342837 121943.62091839529 128494.06629991274 117561.6458188432 108286.67235470666 103360.21952842988 141587.5609751024 107776.64819843993 1.317805653812237 1.2624574110634257 1.2968899575172685 1.1314475162919422 1.1922254815656133 1.09078958924745 1.0047322324899888 0.9590223973018862 1.3137127878982588 1.0 16.71768509985773 -5.545315876391905 0.9999932548719825 1.0672108604925807 1.3090407490832523 0.47152309846231044 0.09600742619654198 0.5079990675701893 1.0436765042470706 0.04063973240968849 0.08262136261413762 2.848945383841061e-06 5.545315876391905 0.24182988859067156 GDFHSPIVLGRPPNTEDRES(ph)PSVK ddPTM_KYSE-520_SHP099_60min_R1 2 GDFHSPIVLGRPPNTEDRESPSVK 24 2 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 GDFHSPIVLGRPPNTEDRES(1)PSVK;GDFHSPIVLGRPPNTEDRES(0.888)PS(0.112)VK 164.62 1.806e-10 2523300000.0 864470.0 735420.0 682200.0 708170.0 783590.0 748580.0 798920.0 764800.0 897540.0 703540.0 True False 816516.1258217791 700089.3193120753 726175.7035585928 775474.2638809251 845254.0749827783 743907.8345483482 879682.6303078159 762147.0873056627 734569.3611421592 697307.1829458372 1.1709561378277118 1.0039898289222904 1.041400004644722 1.112098488079334 1.2121688914947444 1.0668294443858193 1.2615424762893122 1.092986141467672 1.053437249905995 1.0 19.411434817307708 -3.922451574079177 19.872384598231434 1.1028037738649563 3.539972716148138 0.06631063727880637 0.0807316064533007 1143.7068673951612 302306.9210786052 0.019771198286799463 3901.210035835356 0.00011954968218800871 3.922451574079177 2.4371689422831815 GDFHSPIVLGRPPNTEDRES(ph)PSVKR ddPTM_KYSE-520_SHP099_60min_R1 2 GDFHSPIVLGRPPNTEDRESPSVKR 25 3 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 GDFHSPIVLGRPPNT(0.006)EDRES(0.953)PS(0.041)VKR;GDFHSPIVLGRPPNT(0.053)EDRES(0.861)PS(0.086)VKR 195.27 1.5642e-15 2794580000.0 1390060.0 1233260.0 1379140.0 1160020.0 1244440.0 1103590.0 1050030.0 1117690.0 1471380.0 1042410.0 True False 1312950.6007840913 1174012.3384390003 1468041.5711020194 1270267.9520272687 1342370.348104964 1096702.085454076 1156177.2797052471 1113812.994260808 1204214.482471367 1033175.0583827079 1.2707920019278565 1.1363150212673094 1.4209030301215697 1.229479885060037 1.2992670866505995 1.0614871860832673 1.1190526429423124 1.0780486668003073 1.165547380089099 1.0 19.97865329057768 -6.261259463020463 24.999993220535526 1.0918443043980155 1.2698316156782403 0.5956687788522246 0.07672325491601416 12.010427291040125 1668956.5660791583 0.025363407729707733 0.023855310961352127 5.479495025263875e-07 6.261259463020463 0.17798731128022482 GDFHSPIVLGRPPNTEDRESPS(ph)VKR ddPTM_KYSE-520_SHP099_60min_R1 1 GDFHSPIVLGRPPNTEDRESPSVKR 25 3 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 GDFHSPIVLGRPPNT(0.006)EDRES(0.409)PS(0.585)VKR 145.67 7.1521e-07 2093700000.0 1223800.0 1194600.0 1152400.0 1037800.0 1255800.0 1161000.0 1118400.0 1159300.0 1644700.0 982100.0 True False 1155913.3744151827 1137209.6228688448 1226685.5479051918 1136432.199974053 1354624.3154754066 1153753.7683489178 1231458.7865321462 1155278.6588826543 1346063.9395130118 973399.3580622392 1.187501681443757 1.1682868017631582 1.2602078866655235 1.1674881337875194 1.3916429102358128 1.1852830585852376 1.2651115663191208 1.1868496206762298 1.3828485999750828 1.0 19.892672297624493 -4.755194884882013 24.4914119159236 1.2398096659712046 1.1778942139054105 0.030397835011419794 0.10642901497120975 360.281295995789 1413001.2999196523 0.02501913102891013 0.06270532542360593 1.7571349419987697e-05 4.755194884882013 -0.061915452065794074 GDFIHVMDNSDPNWWK ddPTM_KYSE-520_SHP099_60min_R1 2 GDFIHVMDNSDPNWWK 16 0 P62993-2;P62993 P62993-2 GRB2 Growth factor receptor-bound protein 2 0 ; 229.54 1.957e-18 707510000.0 998870.0 884150.0 583530.0 628350.0 966400.0 1056140.0 820470.0 758990.0 745860.0 889990.0 False True 943460.6899020207 841674.1068637941 621145.277481011 688068.1950796843 1042450.1819361628 1049548.2385047593 903411.1146155482 756357.2408395985 610430.6256005199 882105.3810017414 1.0695555318238765 0.9541650294752397 0.7041622133351262 0.7800294725538307 1.1817751080401864 1.1898218298054881 1.0241532747364168 0.8574454448749195 0.6920155332317544 1.0 19.7505914925404 -7.370574546671 5.469619174498079 0.8251363124835837 0.981198835879175 0.12702047095648372 0.16122945310656525 0.5056916389960817 21.24211928918475 0.10171037598829698 0.047352514283991655 4.2601555171423183e-08 7.370574546671 0.15606252339559135 GDFS(ph)YIGNLMTK ddPTM_KYSE-520_SHP099_60min_R1 1 GDFSYIGNLMTK 12 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 GDFS(1)YIGNLMTK 121.79 0.00032067 0.0 118340.0 123710.0 100870.0 97238.0 110080.0 90679.0 85569.0 99165.0 120210.0 120410.0 True False 111775.44429505868 117766.78590750424 107372.24159770638 106479.47028432936 118742.66973047689 90113.03872533282 94219.14959296245 98821.01976028494 98382.89424749762 119343.26107756236 0.9365878164030956 0.9867904131676647 0.899692539220326 0.89221183771011 0.9949675302848048 0.755074378827033 0.7894802667720676 0.828040216665943 0.8243690792357149 1.0 16.864757578900345 -6.2568683573480115 24.999499442801692 0.8255257691396793 0.9394136217980714 0.3560088901393683 0.06771717488343923 393.1411796685561 2150140.2025783053 0.021808156021993468 0.021114240663738085 5.535178652436337e-07 6.2568683573480115 0.11388785265839207 GDGEKS(ph)DEENEEKEGSK ddPTM_KYSE-520_SHP099_60min_R1 3 GDGEKSDEENEEKEGSK 17 2 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 GDGEKS(1)DEENEEKEGSK;GDGEKS(1)DEENEEKEGSK;GDGEKS(1)DEENEEKEGSK 154.79 1.8983e-06 2632450000.0 1173070.0 1051960.0 988320.0 1041290.0 1036870.0 1040350.0 1048990.0 1128710.0 1289680.0 1089830.0 True False 1107997.46864293 1001422.2625758476 1052028.6885679117 1140253.8885247458 1118465.7700167098 1033856.789751763 1155032.1463558248 1124794.7684528942 1055506.6221871097 1080174.95407491 1.0257574150030613 0.9270926517949972 0.9739428641621269 1.0556196329337122 1.0354487167077422 0.9571197571759892 1.0693009886949514 1.0413079512810939 0.9771626514809104 1.0 20.042833571466918 -5.152606345654933 8.24375034058676 1.021245565359606 0.9701877509845259 0.20181614705612116 0.03943528212016233 0.42288374543490587 28.996625861336113 0.010525177514518595 0.01830661280867088 7.037098894529032e-06 5.152606345654933 -0.05105781437508006 GDGRPET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 GDGRPETPK 9 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GDGRPET(1)PK;GDGRPET(1)PK;GDGRPET(1)PK 79.46600000000001 0.032019 3228940000.0 2200290.0 1896410.0 1661890.0 1604300.0 1801530.0 1825880.0 1752010.0 1807870.0 2070590.0 1788490.0 True False 2078235.5275306266 1805303.6170305584 1769018.0885180177 1756772.1896496178 1943300.161696457 1814484.0056442053 1929120.2687698368 1801598.9209300303 1694623.051326226 1772645.370024164 1.172392156194387 1.0184234520669802 0.9979537466616366 0.9910454845379876 1.0962712534374357 1.0236023720973986 1.0882719698997323 1.0163335269397238 0.9559853764225417 1.0 20.75747251329855 -4.260055665309763 24.85908495309467 1.0242856195014325 1.1723922085585994 0.5558280404272329 0.040530533265383036 87.77310662136561 1576700.4301906235 0.010341837774955502 0.06286746546323763 5.4947044145776025e-05 4.260055665309763 0.1481065890571669 GDHAGVLK ddPTM_KYSE-520_SHP099_60min_R1 4 GDHAGVLK 8 0 Q16658 Q16658 FSCN1 Fascin 0 ;;; 144.38 0.00091105 1324620000.0 4964660.0 4245420.0 2839680.0 2843750.0 4340200.0 4777610.0 3413400.0 4249670.0 3614680.0 4174910.0 False True 4689260.412995659 4041463.6506946604 3022730.3164486447 3114019.1449953862 4681749.047640043 4747791.163825555 3758459.783573701 4234928.886650436 2958345.2306675347 4137923.5454308284 1.133239984139781 0.9766888165822492 0.7304944818969407 0.7525559887238477 1.1314247342268364 1.1473849411906494 0.908296091580489 1.0234429998898174 0.7149347246722801 1.0 21.980475558735055 -11.304821124465446 2.2741802393425807 1.257727052916774 0.947814019454313 0.009918336207761391 0.15988297303764681 29315845.896652658 4523920.5916144615 38876030.8429306 0.04165598203532604 4.956542969469658e-12 11.304821124465446 -0.3099130334624609 GDHNRT(ph)LDR ddPTM_KYSE-520_SHP099_60min_R1 4 GDHNRTLDR 9 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 GDHNRT(1)LDR;GDHNRT(1)LDR;GDHNRT(1)LDR;GDHNRT(1)LDR 128.36 0.0016652999999999998 2999781000.0 3899330.0 3614350.0 3672860.0 2888950.0 2943130.0 2735800.0 2372810.0 2372540.0 4250110.0 2571260.0 True False 3683026.391778355 3440711.2007500445 3909618.4323837804 3163514.939405508 3174737.586880978 2718724.8574065166 2612676.7911939723 2364310.2124949987 3478397.1605542954 2548480.636810012 1.4451851580039776 1.3501029401804114 1.5340977584501225 1.2413337161412956 1.2457373781952157 1.0668022421428334 1.0251899714114823 0.9277332455837124 1.3648905588344118 1.0 21.281205961106096 -5.777217308804442 1.5146495246507345 1.0697525551126692 1.4321759606819795 0.6134334220145129 0.12178004296162506 0.2536181999678017 1.210431691724522 0.04425719978831274 0.05971549766701439 1.6702546564973652e-06 5.777217308804442 0.3624234055693103 GDIDHVK ddPTM_KYSE-520_SHP099_60min_R1 1 GDIDHVK 7 0 P42704;C9JCA9;B8ZZ38;A0A0C4DG06 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial 0 81.119 0.012342 0.0 242550.0 278410.0 216940.0 200660.0 310250.0 321570.0 273590.0 297560.0 324260.0 350420.0 False True 229095.26798856244 265034.76569807035 230924.29951627264 219730.66606937087 334664.9099189719 319562.9623496647 301247.1471810889 296527.8338110258 265382.55792940303 347315.5514226344 0.659617074588709 0.7630950143535615 0.6648832698978978 0.632654268342823 0.9635759428224725 0.9200940212458305 0.8673586482009075 0.8537706779797859 0.7640963868227991 1.0 18.40588748480556 -5.757314845624159 24.99999270972765 0.8873955240771034 0.6849090647580339 0.7048475486031669 0.06794967189434205 63.59758488904172 385480.6024001381 0.020839588454287798 0.02592638386601748 1.7485785815159923e-06 5.757314845624159 -0.2024864593190695 GDKEEVAYEER ddPTM_KYSE-520_SHP099_60min_R1 2 GDKEEVAYEER 11 1 F5GWX2;Q9NRV9 F5GWX2 HEBP1 Heme-binding protein 1 0 ; 74.46 0.019999 695460000.0 1313160.0 1216350.0 904250.0 809390.0 1217530.0 1282060.0 954840.0 1135390.0 1135990.0 1110510.0 False True 1240316.3970804387 1157914.720221429 962539.401851155 886314.1822480239 1313342.6842019202 1274058.1879839913 1051364.5455403728 1131451.5970920194 929722.8519774956 1100671.7453637072 1.1268722053645406 1.0520073083540509 0.8745017812127923 0.8052484185056911 1.1932192224739426 1.1575278400219042 0.9552026296386474 1.0279646060307848 0.8446867614197519 1.0 20.069952845723478 -4.525157157095027 24.887295009603925 0.9880241844585815 1.1081560313589827 0.1273712186330651 0.11867713909722954 130.83755151550835 1429171.9387514468 0.03241710751554635 0.08697726375486686 2.9843025011631267e-05 4.525157157095027 0.12013184690040113 GDKHDDLQR ddPTM_KYSE-520_SHP099_60min_R1 6 GDKHDDLQR 9 1 A2A2L6;A2A2L5;A0A0A0MQR2;Q9BY42 A2A2L6 RTFDC1 Protein RTF2 homolog 0 ;;;;; 130.94 0.00055813 5117810000.0 4789340.0 4741380.0 2980706.0 2990613.0 4903300.0 4749220.0 3459710.0 4061870.0 4000640.0 3905220.0 False True 4523665.762887412 4513596.98784353 3172847.078058224 3274839.960359415 5289161.814039306 4719578.356346285 3809451.2503157468 4047780.321017583 3274224.623927362 3870622.7890151897 1.1687178031725425 1.1661164711407939 0.8197252098713287 0.846075719301141 1.3664885736346934 1.21933306695254 0.98419594415838 1.0457697744417682 0.8459167432227177 1.0 21.884134286168095 -6.964429458521029 24.969326626280644 0.9705023671935439 1.0900544637312308 0.13234175026185524 0.1611715012571762 440.04345197092965 308894.9417949462 0.07420534502651291 0.05002906945075547 1.0853518265799998e-07 6.964429458521029 0.11955209653768695 GDKLS(ph)DPCSSR ddPTM_KYSE-520_SHP099_60min_R1 3 GDKLSDPCSSR 11 1 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 GDKLS(0.998)DPCS(0.002)SR;GDKLS(1)DPCSSR;GDKLS(1)DPCSSR 85.469 0.0023726 1852940000.0 3610310.0 3207870.0 2840740.0 2813330.0 3117230.0 3287940.0 2886630.0 2973040.0 3787630.0 2752340.0 True False 3410038.9073254466 3053759.1100889607 3023858.645744706 3080708.0373414904 3362538.266387482 3267418.7468605805 3178438.731193926 2962727.2181527554 3099891.8703822396 2727956.4088881155 1.2500342366963775 1.1194310510752035 1.1084702951603236 1.129309847952135 1.2326217000505573 1.1977532838189096 1.1651354548181443 1.0860610559977129 1.13634215718488 1.0 21.379389160466538 -8.22991684108135 0.8643253241546417 1.0014526975041542 1.167994967856697 0.5207073879193816 0.04828556631441959 0.7936720120711321 1.2058849004444894 0.049504990192253365 0.01711748390966852 5.889564182207495e-09 8.22991684108135 0.16654227035254277 GDKSELNEIKENQRS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 4 GDKSELNEIKENQRSPVR 18 3 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 GDKSELNEIKENQRS(1)PVR;GDKSELNEIKENQRS(1)PVR;GDKSELNEIKENQRS(1)PVR;GDKSELNEIKENQRS(1)PVR 226.16 7.065600000000001e-19 54323500000.0 10892400.0 11357800.0 12570600.0 7946200.0 9097600.0 8116500.0 6809930.0 6516840.0 14114900.0 6801040.0 True False 10288176.858538933 10812154.239594636 13380920.989671128 8701404.458887856 9813529.361736778 8065841.912837196 7498344.18291206 6494234.60308189 11551989.96767327 6740788.07672905 1.5262572775513281 1.6039896398643654 1.9850677453969425 1.2908586295610396 1.455843033489753 1.1965725403358365 1.1123839078695101 0.9634236426304031 1.7137447188932906 1.0 22.684485838464933 -5.660992825048573 1.7503061524944639 1.203905957520164 1.6838269898244105 0.41066095994088936 0.2410236869333703 0.3444195477054984 2.1690070541557374 0.08156957175625618 0.11773813782107957 2.182765972882495e-06 5.660992825048573 0.47992103230424643 GDKVDILYNNIK ddPTM_KYSE-520_SHP099_60min_R1 1 GDKVDILYNNIK 12 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 0 130.1 7.6067e-05 331990000.0 377090.0 343510.0 206250.0 184810.0 311150.0 309520.0 225310.0 266740.0 233830.0 252700.0 False True 356172.06598972145 327007.263980978 219545.20501166812 202374.28683484724 335635.73479867226 307588.1708693855 248086.5336136965 265814.7411975841 191372.36637461415 250461.274597625 1.4220644151952218 1.3056200584554514 0.8765634741912711 0.8080062962227146 1.3400703774980107 1.2280867426053663 0.9905185303087529 1.0613007604653653 0.7640796633414116 1.0 17.934228030891763 -4.617242560266321 5.584355065486264 1.023514947788029 1.3942341798209446 0.4212961963020122 0.16794763487837389 0.1948115096749005 9.043999003008981 0.045881414314034044 0.12697305930897582 2.414112138427744e-05 4.617242560266321 0.37071923203291557 GDLAFGAPGPRPPS(ph)PFDDPADDPEHK ddPTM_KYSE-520_SHP099_60min_R1 10 GDLAFGAPGPRPPSPFDDPADDPEHK 26 1 Q7Z3Z5;Q93074-3;Q93074;Q93074-2 Q7Z3Z5 TNRC11;MED12 Mediator of RNA polymerase II transcription subunit 12 1 GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK;GDLAFGAPGPRPPS(1)PFDDPADDPEHK 205.42 2.4354e-16 21058100000.0 11135260.0 10092800.0 8680780.0 8331570.0 9081260.0 9631350.0 9051640.0 8561740.0 10219600.0 8773830.0 True False 10517564.930209523 9607926.73839835 9240356.968539098 9123399.907822134 9795903.496698678 9571237.172082119 9966668.10669335 8532041.322265139 8363978.255151199 8696100.692136457 1.2094575836409236 1.1048545869629156 1.0625862436131623 1.049136875343689 1.1264707992119651 1.100635504455119 1.146107716497098 0.9811341455579429 0.9618078896803043 1.0 23.051937214749756 -7.2726049408846345 24.17415163383759 0.9786032311603704 1.109285842945821 0.6692106155475316 0.04280780141393597 305.163929747657 660693.600119502 0.024045556702741458 0.011730293177997883 5.338202681591654e-08 7.2726049408846345 0.1306826117854506 GDLGIEIPAEK ddPTM_KYSE-520_SHP099_60min_R1 3 GDLGIEIPAEK 11 0 P14618;B4DNK4;P14618-3;P30613-2;P30613;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase;Pyruvate kinase PKLR 0 ;; 165.11 0.00012993 2374810000.0 3882530.0 5133160.0 4612890.0 2850830.0 4680320.0 5040470.0 4040820.0 4245270.0 4659710.0 4974130.0 False True 3667158.3212683266 4886555.288569762 4910244.270284954 3121772.026066703 5048634.55662196 5009010.557062589 4449305.520202817 4230544.149223466 3813624.125730024 4930063.0780145805 0.7438359840915368 0.9911750034925843 0.9959800092988653 0.6332113761359607 1.02405070213729 1.0160134825455016 0.9024845016779436 0.8581115661763861 0.7735446921027702 1.0 22.23317467470153 -4.239869227358421 23.147290596785286 0.9066739203023224 0.7438355227593076 0.1468873498401082 0.12018287407075909 4065.617943385535 4362696.69600053 0.030168054281417868 1.2041285455207158 5.756132371018957e-05 4.239869227358421 -0.16283839754301477 GDLKS(ph)SKAS(ph)LGS(ph)LEGEAEAEASSPK ddPTM_KYSE-520_SHP099_60min_R1 1 GDLKSSKASLGSLEGEAEAEASSPK 25 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 3 GDLKS(0.535)S(0.487)KAS(0.983)LGS(0.995)LEGEAEAEASSPK 78.15899999999999 0.0079281 307620000.0 926890.0 817860.0 694660.0 696600.0 772170.0 762000.0 758070.0 738640.0 1035400.0 716480.0 True False 875473.5639905949 778568.777967112 739438.8950952978 762804.6545595732 832935.3859536917 757244.0753504524 834703.1136502355 736077.830239872 847397.4603099496 710132.5446130043 1.2328312096549459 1.0963710702646403 1.041268845801546 1.0741722236871614 1.1729294654529745 1.0663418837720249 1.175418758064549 1.0365358352094776 1.1932947824152313 1.0 19.43772879991222 -8.323294072496367 0.009513727897676351 4.5125566625797226e-05 2.169963614554515 0.15410623199806217 0.06873359113803727 5376.87261198365 25.065349161977185 2912.9760506646467 2800.9453308724437 4.750134725989725e-09 8.323294072496367 2.1699184889878893 GDLKSS(ph)KAS(ph)LGS(ph)LEGEAEAEASSPK ddPTM_KYSE-520_SHP099_60min_R1 1 GDLKSSKASLGSLEGEAEAEASSPK 25 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 3 GDLKS(0.466)S(0.535)KAS(0.999)LGS(1)LEGEAEAEASSPK 110.31 0.00023217 403490000.0 957470.0 872960.0 668870.0 722240.0 703940.0 767480.0 612880.0 724010.0 1010300.0 791660.0 True False 904357.2304308745 831021.6912603261 711986.4304298392 790881.4724506265 759336.073129286 762689.8726377481 674835.8915323868 721498.5782952046 826854.98759044 784646.5083021598 1.1525664370669897 1.0591032808627596 0.9073976916948951 1.0079462077285708 0.9677428817880789 0.9720171625922072 0.8600508437775574 0.9195205365233874 1.0537929868312446 1.0 19.581683325156842 -4.528968918596202 3.7047509196875095 0.9570829606649274 1.1412158822293144 0.5708196664160465 0.052894793995348785 0.15169296592836315 4.406643557262063 0.013892126751196856 0.05324303557474885 2.9582241719122063e-05 4.528968918596202 0.184132921564387 GDLS(ph)DVEEEEEEEMDVDEATGAVK ddPTM_KYSE-520_SHP099_60min_R1 2 GDLSDVEEEEEEEMDVDEATGAVK 24 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 GDLS(1)DVEEEEEEEMDVDEATGAVK;GDLS(1)DVEEEEEEEMDVDEATGAVK 163.78 7.1961e-12 178353000.0 214375.0 244561.0 182586.0 175632.0 193804.0 208524.0 194154.0 234380.0 289370.0 237594.0 True False 202483.19140403264 232811.92246645497 194355.7857079293 192324.01247431352 209055.2722060804 207222.5243679498 213780.98108043816 233566.99048470298 236827.70242407735 235489.10200533463 0.8598410273756351 0.9886314079246903 0.8253281534171653 0.8167002669616394 0.8877492437053185 0.8799665148124584 0.9078168767045334 0.9918377899263121 1.0056843412597174 1.0 17.845300770594797 -7.191741073333339 2.3970142032506256 1.0045600540558886 0.876908841850911 0.6116989090117909 0.0438522076775777 0.22287342569801902 2.4638496456671333 0.02895132357672639 0.013379920951298004 6.430710024189985e-08 7.191741073333339 -0.12765121220497755 GDLS(ph)DVEEEEEEEMDVDEATGAVKK ddPTM_KYSE-520_SHP099_60min_R1 11 GDLSDVEEEEEEEMDVDEATGAVKK 25 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK;GDLS(1)DVEEEEEEEMDVDEATGAVKK 366.44 4.5158e-86 5649736000.0 5506589.0 5734837.0 4944502.0 4512437.0 4804013.0 4698486.0 4158154.0 4696922.0 6604097.0 4570223.0 True False 5201127.531056979 5459326.8223541705 5263232.5104029225 4941297.655766345 5182061.492005063 4669161.006059113 4578500.785992296 4680629.4738518335 5404959.460537528 4529734.379799692 1.1482190996124095 1.205220077958652 1.16192961200424 1.0908581478424022 1.1440100141664857 1.0307803095212806 1.0107658423438861 1.0333121285709503 1.193217749067339 1.0 22.110995023529224 -5.623098189823064 1.2049500530939312 1.0565167649137106 1.1785065748836403 0.4158953265500379 0.05673596282379482 0.4700657230599168 1.419006031333091 0.02255618575760195 0.03825365539927807 2.381780910626231e-06 5.623098189823064 0.1219898099699297 GDMS(ph)DEDDENEFFDAPEIITMPENLGHK ddPTM_KYSE-520_SHP099_60min_R1 41 GDMSDEDDENEFFDAPEIITMPENLGHK 28 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK;GDMS(1)DEDDENEFFDAPEIITMPENLGHK 321.97 5.097399999999999e-65 92622289000.0 12769997.0 11773366.0 11469491.0 11523492.0 12303588.0 11379796.0 11187667.0 11783299.0 14643066.0 11898833.0 True False 12061619.810052091 11207755.825177358 12208832.741694462 12618681.215015808 13271810.37776035 11308770.47204299 12318625.561467946 11742425.486011647 11984254.336054614 11793418.596771983 1.0227416004171612 0.9503398639852461 1.0352242347300538 1.0699765391580105 1.1253573566355919 0.9589052045637007 1.044533903412851 0.9956761383188506 1.0161815454710363 1.0 23.491478641877325 -4.794548803798269 24.530973117769406 1.033286238690533 0.9865407120269722 0.12804464439183771 0.045740731200563475 264.729989135965 196139.3695303987 0.012277961549854801 0.025561329143753055 1.604911896151772e-05 4.794548803798269 -0.0467455266635608 GDMS(ph)DEDDENEFFDAPEIITMPENLGHKR ddPTM_KYSE-520_SHP099_60min_R1 12 GDMSDEDDENEFFDAPEIITMPENLGHKR 29 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR;GDMS(1)DEDDENEFFDAPEIITMPENLGHKR 292.77 1.6386999999999999e-52 6224810000.0 2927456.0 3490081.0 3140080.0 2288052.0 2649195.0 2237068.0 1673910.0 1978559.0 4261187.0 2166769.0 True False 2765064.1799411443 3322412.270041615 3342494.581105636 2505507.7741520843 2857671.574642356 2223105.6288137604 1843125.1585872902 1971695.84062814 3487462.8565827375 2147573.1123807747 1.2875297069052174 1.5470543241987356 1.5564054894504546 1.166669371910001 1.3306515890741315 1.035171103604129 0.8582362798088969 0.9181041750156486 1.623908791033697 1.0 21.03427581690383 -5.683525996225136 1.5196216166936374 1.0799067772832351 1.4628926089649563 0.3104394477564466 0.22063727390650778 0.4587471633124579 2.1940143564446184 0.08121025664624551 0.11927568528130522 2.0724020049519095e-06 5.683525996225136 0.3829858316817212 GDNIYEWR ddPTM_KYSE-520_SHP099_60min_R1 1 GDNIYEWR 8 0 R4GN77;R4GND1;A0A1B0GX65;Q969T4;A0A087X283;H7C061;B7Z306;P51965-2;C9J180;Q96LR5;C9J2P0;P51965-3;P51965 R4GN77;C9J180;C9J2P0 UBE2E3;UBE2E2;UBE2E1 Ubiquitin-conjugating enzyme E2 E3;Ubiquitin-conjugating enzyme E2 E1;Ubiquitin-conjugating enzyme E2 E2 0 113.71 0.0078505 528190000.0 374740.0 354790.0 271250.0 202650.0 353000.0 383130.0 278210.0 294130.0 276620.0 303110.0 False True 353952.4251743309 337745.3558493529 288735.20901534514 221909.795071056 380779.09170474444 380738.7435551425 306334.1818679437 293109.73168045824 226392.7810227332 300424.6812160113 1.1781735899382784 1.1242263933917842 0.961090173572453 0.7386536757660682 1.26746940418972 1.2673351004785915 1.0196704898812339 0.9756513029956635 0.7535758383977523 1.0 18.19664381593496 -7.378517442451079 2.9806584358888633 0.876676056907079 1.0791477157615474 0.20938002922591747 0.1574444623743319 0.45752660015670465 7.645955498581283 0.11348107652653318 0.04626074891884749 4.182948884503653e-08 7.378517442451079 0.2024716588544685 GDPNTEEIRQS(ph)DEVGDRDHR ddPTM_KYSE-520_SHP099_60min_R1 2 GDPNTEEIRQSDEVGDRDHR 20 2 P40222 P40222 TXLNA Alpha-taxilin 1 GDPNT(0.001)EEIRQS(0.999)DEVGDRDHR;GDPNTEEIRQS(1)DEVGDRDHR 159.36 6.1864e-09 219820000.0 158614.0 128122.0 137147.0 135980.0 137532.0 138381.0 147552.0 155813.0 152201.0 137506.0 True False 149815.36523083012 121966.82680495737 145987.71506295854 148903.49831612228 148354.9859499632 137517.3128491744 162467.99612874753 155272.52107002743 124565.13507498015 136287.80381804935 1.0992573145491487 0.8949210669487994 1.071172261737074 1.0925665697490838 1.0885419075944909 1.0090214164193776 1.1920949019447842 1.1392987246116577 0.9139859296674887 1.0 17.056296937838294 -4.935528376337315 24.999998685345705 1.0730485548553306 0.993577913204587 0.07704530884494376 0.0864985021680733 121.30007905553977 47033.880239274746 0.021915218431287103 0.045620194749329664 1.1600364181319762e-05 4.935528376337315 -0.07947064165074358 GDPPRLS(ph)PDPVAGSAVSQELR ddPTM_KYSE-520_SHP099_60min_R1 9 GDPPRLSPDPVAGSAVSQELR 21 1 Q9BUR4;E9PMG4;E9PMR3 Q9BUR4 WRAP53 Telomerase Cajal body protein 1 1 GDPPRLS(1)PDPVAGSAVSQELR;GDPPRLS(0.993)PDPVAGS(0.005)AVS(0.002)QELR;GDPPRLS(1)PDPVAGSAVSQELR;GDPPRLS(1)PDPVAGSAVSQELR;GDPPRLS(1)PDPVAGSAVSQELR;GDPPRLS(0.957)PDPVAGS(0.038)AVS(0.005)QELR;GDPPRLS(0.961)PDPVAGS(0.032)AVS(0.007)QELR;GDPPRLS(1)PDPVAGSAVSQELR;GDPPRLS(1)PDPVAGSAVSQELR 113.91 8.5384e-05 11593490000.0 3188080.0 3147280.0 2567863.0 2112886.0 2611330.0 2996810.0 2606790.0 3089912.0 3346460.0 2848190.0 True False 3011230.847120081 2996079.9446364096 2733391.5577060664 2313694.0501776575 2816826.814564738 2978105.797179776 2870309.77301872 3079193.816462884 2738827.2213915703 2822957.252458288 1.0666937462470751 1.061326714043354 0.9682723871662506 0.8195993928575597 0.9978283631860839 1.0549595799179678 1.0167740834613053 1.0907688431277025 0.9701979082419844 1.0 21.428775851801692 -6.006255497732793 24.995750542353623 1.0310240135341273 0.9746689906840121 0.09086988443828414 0.07005236210869724 689.3763354369121 2754628.012039002 0.023975284578870843 0.02629616043037365 9.856994228550333e-07 6.006255497732793 -0.05635502285011518 GDQCCYSHS(ph)PPTPR ddPTM_KYSE-520_SHP099_60min_R1 4 GDQCCYSHSPPTPR 14 0 Q9NXH9-2;Q9NXH9 Q9NXH9-2 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase 1 GDQCCYSHS(0.998)PPT(0.002)PR;GDQCCYS(0.003)HS(0.997)PPTPR;GDQCCYS(0.004)HS(0.994)PPT(0.002)PR;GDQCCYSHS(0.962)PPT(0.038)PR 179.14 7.628699999999999e-09 2080490000.0 1350280.0 1172390.0 1134920.0 1109610.0 1185020.0 1147870.0 1060480.0 1133020.0 1398060.0 1133320.0 True False 1275377.276683555 1116066.624606734 1208078.759136205 1215067.0007835901 1278274.332158519 1140705.7175492435 1167683.667687421 1129089.8180688573 1144207.5462245776 1123279.6665096174 1.1354049349495952 0.9935785876679344 1.0754924131138999 1.0817136969630945 1.1379840393003096 1.01551354623357 1.0395306729941802 1.0051724888578228 1.0186310500749913 1.0 20.099285734155583 -6.3177491447210326 24.965610425983797 1.0175778484281233 1.079072584146108 0.44036448531119265 0.038630405927658006 310.70853963152 137755.55371673434 0.01363538393431405 0.012025284188419047 4.811171689999375e-07 6.3177491447210326 0.061494735717984694 GDQCCYSHSPPT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 GDQCCYSHSPPTPR 14 0 Q9NXH9-2;Q9NXH9 Q9NXH9-2 TRMT1 tRNA (guanine(26)-N(2))-dimethyltransferase 1 GDQCCYSHS(0.204)PPT(0.796)PR;GDQCCYSHSPPT(1)PR;GDQCCYSHS(0.002)PPT(0.998)PR;GDQCCYSHSPPT(1)PR 144.27 6.1702e-06 2010250000.0 1662950.0 1504680.0 1449760.0 1346450.0 1312050.0 1494120.0 1377740.0 1435920.0 1823550.0 1558000.0 True False 1570702.8484913625 1432392.9142292752 1543213.849298015 1474416.2031750449 1415300.8704566853 1484794.6428643255 1517015.4046466355 1430939.1286662458 1492439.2879546138 1544197.332105658 1.0171645914901055 0.9275970657688373 0.9993631106677915 0.954810743756784 0.9165285038582405 0.9615316721468937 0.9823973744197853 0.9266556151311478 0.9664822344431412 1.0 20.55842569489602 -5.43652580749657 24.999448373745913 0.9546681388860496 0.976178906202944 0.08716205303066837 0.031348734123866316 194.86969868512486 56411.41650558698 0.008441632610834568 0.012520963722521717 3.6599419108880315e-06 5.43652580749657 0.021510767316894386 GDQPAASGDS(ph)DDDEPPPLPR ddPTM_KYSE-520_SHP099_60min_R1 2 GDQPAASGDSDDDEPPPLPR 20 0 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 GDQPAASGDS(1)DDDEPPPLPR;GDQPAAS(0.24)GDS(0.76)DDDEPPPLPR 315.56 6.5003e-48 380020000.0 1176650.0 1156950.0 952240.0 1034180.0 1006530.0 1171610.0 1059100.0 1290260.0 1327670.0 1165100.0 True False 1111378.878906377 1101368.3853826446 1013622.91403787 1132468.156262444 1085738.1846276976 1164297.5474033381 1166164.1638199168 1285784.3892089473 1086598.5958370771 1154778.1204340823 0.962417679414127 0.9537489201550156 0.8777642181658656 0.9806803023222748 0.9402136786411985 1.0082435117195305 1.0098599403507527 1.1134471345245263 0.9409587665452334 1.0 20.13918424754562 -6.331908268020915 2.1724261396500215 1.0256182991226979 0.9399076609340273 0.3589911371004403 0.04698509735742544 0.3189185434445539 2.955463112601455 0.018392418347427858 0.01614880817196438 4.6568444532436793e-07 6.331908268020915 -0.08571063818867053 GDQVLNFS(ph)DAEDLIDDSK ddPTM_KYSE-520_SHP099_60min_R1 11 GDQVLNFSDAEDLIDDSK 18 0 F8W126;Q96EZ8-4;Q96EZ8-3;Q96EZ8;Q96EZ8-2 F8W126 MCRS1 Microspherule protein 1 1 GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK;GDQVLNFS(1)DAEDLIDDSK 302.04 1.6747999999999998e-38 5565379000.0 3929629.0 3719966.0 3395383.0 3301606.0 3572216.0 3483694.0 3257449.0 3728105.0 4342602.0 3996497.0 True False 3711644.6458488014 3541253.249577194 3614254.8209848795 3615389.641575962 3853329.07607127 3461950.9735353277 3586743.7345586135 3715173.073901252 3554094.944887869 3961091.145807614 0.9370258116320235 0.8940095340459981 0.9124391961568915 0.9127256880727069 0.9727948522844775 0.8739892231966002 0.9054938658391624 0.9379165833720742 0.897251493101716 1.0 21.917466467762303 -10.159805395740893 4.314615830870031 1.000019939579666 0.9158914025289339 0.4801492112659528 0.026233333195590295 34740176.806976624 0.26548003915325813 6881.996264528095 0.006178915989980961 6.921410449073027e-11 10.159805395740893 -0.0841285370507322 GDQVLNFS(ph)DAEDLIDDSKLK ddPTM_KYSE-520_SHP099_60min_R1 6 GDQVLNFSDAEDLIDDSKLK 20 1 F8W126;Q96EZ8-4;Q96EZ8-3;Q96EZ8;Q96EZ8-2 F8W126 MCRS1 Microspherule protein 1 1 GDQVLNFS(1)DAEDLIDDSKLK;GDQVLNFS(1)DAEDLIDDSKLK;GDQVLNFS(1)DAEDLIDDSKLK;GDQVLNFS(1)DAEDLIDDSKLK;GDQVLNFS(1)DAEDLIDDSKLK;GDQVLNFS(1)DAEDLIDDSKLK 241.69 1.7731999999999998e-26 1028941000.0 949662.0 1077722.0 1073156.0 699374.0 794499.0 737462.0 527659.0 546473.0 1256886.0 700113.0 True False 896982.3557557375 1025946.6174262986 1142333.352870309 765842.2946855394 857021.5512190593 732859.2261103608 580999.9211755773 544577.4127107565 1028667.1859176458 693910.5434996712 1.2926484028213394 1.4784998254271153 1.646225675011451 1.103661418405732 1.2350605697627153 1.056129256105918 0.8372836046637367 0.7847948381995072 1.4824204583052762 1.0 19.40439016207043 -5.60403384849346 1.7059134041300343 1.0219008157303475 1.4661738041923198 0.41715113642842705 0.20760924640547956 0.33958361513024105 2.0186727159539224 0.07154172045489643 0.10923753744633946 2.488663346700193e-06 5.60403384849346 0.4442729884619723 GDRDES(ph)DDGGVAQR ddPTM_KYSE-520_SHP099_60min_R1 1 GDRDESDDGGVAQR 14 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 GDRDES(1)DDGGVAQR 120.63 0.00085119 41471000.0 121360.0 118960.0 103700.0 98948.0 106480.0 96379.0 91264.0 93988.0 127010.0 102250.0 True False 114627.91887483794 113244.98303739977 110384.66792586654 108351.98817019911 114859.3702116749 95777.46291102524 100489.85577080637 93661.97756496411 103948.18566154785 101344.14454929615 1.131075893773816 1.1174299565212154 1.0892061738423662 1.0691489740435294 1.133359709359475 0.9450715020287813 0.9915704179823214 0.9241972289716723 1.0256950327404957 1.0 16.628903209776098 -6.261337272116985 24.999999991177802 0.9734606343138301 1.105358181777839 0.8075542753228023 0.031869692389515494 3.78992428967573 927985.4092430761 0.010481783774027871 0.009846401152062324 5.478513395553903e-07 6.261337272116985 0.13189754746400895 GDREEEVERPVSS(ph)PGDPEQK ddPTM_KYSE-520_SHP099_60min_R1 1 GDREEEVERPVSSPGDPEQK 20 2 O43149 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 GDREEEVERPVS(0.341)S(0.659)PGDPEQK 143.67 1.4494999999999998e-06 631210000.0 653940.0 542900.0 481700.0 559480.0 587940.0 559930.0 543200.0 645050.0 720330.0 514480.0 True False 617664.6446029289 516818.2690904864 512751.15274725074 612652.8109862042 634207.5330790014 556435.269174513 598111.9571211208 642812.4721058015 589536.2300415931 509922.10745938297 1.211292147501426 1.0135239510706109 1.0055479949711597 1.201463521632084 1.243734138609627 1.0912162093674964 1.1729476882285643 1.26060914540169 1.1561299685139688 1.0 18.959917361198393 -5.274397156179165 24.811111582911753 1.1727837185425602 1.070461620170356 0.1502966097875642 0.08811558627468548 1015.6539623055485 1944737.7471958601 0.024200023723564976 0.03612810922740605 5.316218761967512e-06 5.274397156179165 -0.10232209837220418 GDRS(ph)PEPGQTWTR ddPTM_KYSE-520_SHP099_60min_R1 2 GDRSPEPGQTWTR 13 1 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GDRS(0.999)PEPGQT(0.001)WTR;GDRS(0.999)PEPGQT(0.001)WTR 81.317 0.0054221 1871300000.0 422990.0 445440.0 477620.0 450920.0 507350.0 471140.0 494840.0 478200.0 678500.0 562270.0 True False 399525.9014903402 424040.3937809293 508408.14941901935 493775.3012259582 547275.558573377 468199.4404994906 544863.2563730034 476541.2358127187 555301.5035931037 557288.7252394406 0.7169100744298799 0.7608989282866602 0.9122885972627213 0.8860313852820302 0.9820323537646282 0.8401380097871664 0.9777037138852961 0.855106543933706 0.9964341255145921 1.0 19.08806544033141 -4.716306398227969 2.7607906058978187 0.9271088436929494 0.7193409233132056 0.6646538521199197 0.05504646063761074 0.14875762246290342 2.221495882541568 0.013567546898163415 0.044832276789967346 1.921735450814373e-05 4.716306398227969 -0.2077679203797438 GDRWEDLSR ddPTM_KYSE-520_SHP099_60min_R1 2 GDRWEDLSR 9 1 H0Y580;Q9NR50-3;Q9NR50-2;Q9NR50 H0Y580 EIF2B3 Translation initiation factor eIF-2B subunit gamma 0 ; 204.5 1.0054000000000001e-06 500100000.0 566310.0 508340.0 334340.0 268700.0 480820.0 487750.0 352690.0 356240.0 367860.0 383050.0 False True 534895.655389003 483918.5833661037 355892.09136291407 294237.16721239925 518657.79850842827 484705.7713283235 388343.3471226955 355004.2865870411 301065.89699596073 379656.47500839015 1.4088938042665602 1.2746222314670372 0.9374055621072948 0.7750089530433975 1.366123937427819 1.276695653136462 1.0228808743854911 0.9350671197671415 0.7929955547032548 1.0 18.534335087855702 -7.065000792338846 3.3435123903158313 0.8997456680526824 1.1576109462569526 0.28190703595618427 0.18815163049054068 0.38168050903800316 8.329347805447266 0.10496099064725938 0.05860391069478326 8.609921813652562e-08 7.065000792338846 0.2578652782042702 GDRYDALR ddPTM_KYSE-520_SHP099_60min_R1 4 GDRYDALR 8 1 A0AVT1 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 0 ;;; 124.23 0.00097737 2723960000.0 2684460.0 2627300.0 1722270.0 1467340.0 2461790.0 2418260.0 1650080.0 1917510.0 1955590.0 2022150.0 False True 2535547.65246166 2501080.5643423027 1833290.2799294307 1606795.5524281436 2655518.867330943 2403166.7423320008 1816886.1896289026 1910858.6053602002 1600504.1524121426 2004235.3242088954 1.2650947829504413 1.247897656593554 0.9147080972904519 0.8017000464066624 1.3249536295739721 1.1990442007006188 0.9065233845960965 0.9534103018139586 0.7985609938513023 1.0 20.934620479622463 -6.775610714793392 24.865088359537758 0.9107411069784911 1.1158842970008704 0.29651344178397954 0.15871057233575017 332.4697878803936 583347.4138266594 0.071957023662345 0.04878034851818931 1.6764449047784535e-07 6.775610714793392 0.20514319002237935 GDS(ph)ES(ph)EEDEDLEVPVPSR ddPTM_KYSE-520_SHP099_60min_R1 3 GDSESEEDEDLEVPVPSR 18 0 P13861-2;P13861 P13861-2 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 2 GDS(1)ES(1)EEDEDLEVPVPSR;GDS(1)ES(1)EEDEDLEVPVPSR;GDS(1)ES(1)EEDEDLEVPVPSR 230.07 7.596200000000001e-22 797830000.0 2154070.0 1954650.0 1911440.0 2048690.0 2093080.0 2149920.0 2089400.0 2254070.0 2499260.0 2121390.0 True False 2034579.4430679122 1860745.680010535 2034654.4808121328 2243396.8816388943 2257793.4880038723 2136501.5518076676 2300616.9425789197 2246251.157273893 2045457.3852175404 2102596.135016445 0.9676510905657111 0.8849753164774944 0.9676867787052311 1.0669651885483695 1.0738122506756218 1.0161255013393038 1.0941791931720286 1.068322689205516 0.9728246671591747 1.0 21.003740334294847 -5.090626929732226 4.1510335175361295 1.0466452574257956 0.9258019291947975 0.5841995866693919 0.040022609979832945 0.13953130718939488 4.274669811839026 0.010724212789872631 0.019993670635627174 8.116579938179182e-06 5.090626929732226 -0.12084332823099808 GDS(ph)ES(ph)EEDEQDSEEVR ddPTM_KYSE-520_SHP099_60min_R1 1 GDSESEEDEQDSEEVR 16 0 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 2 GDS(1)ES(1)EEDEQDSEEVR 123.03 0.00015405 0.0 36584.0 32154.0 30422.0 23580.0 30560.0 34140.0 27410.0 33109.0 39657.0 28973.0 True False 34554.61259160408 30609.273575862047 32383.05079692101 25821.036110414505 32964.89813738528 33926.91959641003 30180.870295820936 32994.152606698706 32456.288471616394 28716.32176065291 1.2033091452175741 1.0659190209312552 1.127687977131258 0.8991763055738732 1.1479498806338688 1.181450740076909 1.0510005615403972 1.1489686207621228 1.1302383620763012 1.0 14.809583347460158 GDS(ph)ETDLEALFNAVMNPK ddPTM_KYSE-520_SHP099_60min_R1 21 GDSETDLEALFNAVMNPK 18 0 P46937-6;P46937;P46937-7;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 GDS(0.99)ET(0.01)DLEALFNAVMNPK;GDS(0.999)ET(0.001)DLEALFNAVMNPK;GDS(0.999)ET(0.001)DLEALFNAVMNPK;GDS(0.999)ET(0.001)DLEALFNAVMNPK;GDS(1)ETDLEALFNAVMNPK;GDS(0.971)ET(0.029)DLEALFNAVMNPK;GDS(1)ETDLEALFNAVMNPK;GDS(0.98)ET(0.02)DLEALFNAVMNPK;GDS(0.5)ET(0.5)DLEALFNAVMNPK;GDS(0.994)ET(0.006)DLEALFNAVMNPK;GDS(1)ETDLEALFNAVMNPK;GDS(0.905)ET(0.095)DLEALFNAVMNPK;GDS(0.89)ET(0.11)DLEALFNAVMNPK;GDS(0.937)ET(0.063)DLEALFNAVMNPK;GDS(0.5)ET(0.5)DLEALFNAVMNPK;GDS(0.982)ET(0.018)DLEALFNAVMNPK;GDS(0.996)ET(0.004)DLEALFNAVMNPK;GDS(0.994)ET(0.006)DLEALFNAVMNPK;GDS(0.5)ET(0.5)DLEALFNAVMNPK;GDS(0.865)ET(0.135)DLEALFNAVMNPK;GDS(0.992)ET(0.008)DLEALFNAVMNPK 348.48 1.6442999999999995e-59 24233863000.0 10872649.0 9271661.0 7276189.0 6360038.0 6744712.0 7625985.0 6128511.0 7916074.0 11120011.0 7433492.0 True False 10269521.485881561 8826236.488513112 7745223.78525403 6964494.099304841 7275482.462238215 7578388.398899493 6748040.700383496 7888614.986919571 9100897.31506538 7367637.044049272 1.3938690823777886 1.1979738463965088 1.0512493678702222 0.9452819211459332 0.9874919758858792 1.028605013193537 0.9159029767669927 1.0707116731939292 1.2352532108535443 1.0 22.812770560225733 -4.46576150806621 2.0388883215568936 1.021329537851434 1.4249690388040177 0.6635725046783079 0.08203894671930777 0.2911752474357617 1.8083732859962 0.023434211867227356 0.18664564871466263 3.42167291404573e-05 4.46576150806621 0.4036395009525837 GDS(ph)LILEHQWELEK ddPTM_KYSE-520_SHP099_60min_R1 14 GDSLILEHQWELEK 14 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK;GDS(1)LILEHQWELEK 276.34 2.9536e-25 15709590000.0 11383940.0 10390570.0 9523830.0 9217500.0 9894794.0 10257586.0 9353771.0 10203180.0 11757950.0 10146310.0 True False 10752450.15487822 9891391.420636464 10137751.320466787 10093528.428657567 10673457.994123397 10193564.600915672 10299341.456687737 10167787.550020112 9623002.67379888 10056421.58710973 1.0692123497149977 0.9835895735830327 1.0080873432614743 1.0036898653488633 1.0613574522178526 1.0136373572466106 1.0241556966833392 1.011074114380122 0.9569012784958812 1.0 23.261613701270676 -7.601418518917503 6.3689186979526875 0.9789916396272396 1.0213347696580755 0.3136377419436124 0.026091404878209438 0.25657298223644676 16.366028424825195 0.017594846220934587 0.006470385190944832 2.503695340444605e-08 7.601418518917503 0.042343130030835896 GDS(ph)LILEHQWELEKLELLHEVEK ddPTM_KYSE-520_SHP099_60min_R1 4 GDSLILEHQWELEKLELLHEVEK 23 1 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 GDS(1)LILEHQWELEKLELLHEVEK;GDS(1)LILEHQWELEKLELLHEVEK;GDS(1)LILEHQWELEKLELLHEVEK;GDS(1)LILEHQWELEKLELLHEVEK 256.43 4.1976e-30 503240000.0 372122.0 445561.0 392003.0 319822.0 328055.0 301921.0 226973.0 273667.0 536757.0 271930.0 True False 351479.65085318405 424155.58075930405 417272.1406069759 350217.7867220095 353871.0621223796 300036.59904709127 249917.6458830121 272717.71305135806 439295.45934285066 269520.9117583384 1.304090463927833 1.573739039364843 1.5481994991955068 1.2994085855424333 1.312963286647206 1.1132219651887876 0.9272662527466394 1.0118610510485584 1.6299123376991909 1.0 18.040037688489264 -5.790595746489099 1.7202628742731165 1.1292592896093963 1.4768297142691191 0.341234591519716 0.1962434368206862 0.39966396885716526 2.4466913658178786 0.07158691735852597 0.09314698460407775 1.6195868932260501e-06 5.790595746489099 0.3475704246597229 GDS(ph)LKEPTSIAESSR ddPTM_KYSE-520_SHP099_60min_R1 6 GDSLKEPTSIAESSR 15 1 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 GDS(0.972)LKEPT(0.013)S(0.013)IAES(0.001)S(0.001)R;GDS(1)LKEPTSIAESSR;GDS(0.977)LKEPT(0.01)S(0.01)IAESS(0.001)R;GDS(1)LKEPTSIAESSR;GDS(1)LKEPTSIAESSR;GDS(1)LKEPTSIAESSR 181.32 3.0033000000000006e-09 3865340000.0 1500510.0 1845980.0 1537050.0 2637140.0 2735590.0 2498190.0 2382590.0 3134880.0 3808620.0 2068640.0 True False 1417273.7191074744 1757296.34992753 1636130.702366954 2887772.9927149457 2950865.3696220447 2482597.8695534714 2623445.449037577 3124005.8329664916 3117070.615497079 2050313.458977569 0.6912473372799431 0.8570866772751138 0.7979905195485788 1.408454390264303 1.439226454228884 1.2108382055841695 1.2795338378873113 1.523672304489647 1.5202897887874525 1.0 20.96741306009967 -5.257715057879702 24.088873519690367 1.358304835332256 0.7896059510203528 0.7364432005109378 0.15273533546094353 94.3723317352999 610394.2477276329 0.041574241294699506 0.06853086323979676 5.524397780619756e-06 5.257715057879702 -0.5686988843119032 GDS(ph)PELKPR ddPTM_KYSE-520_SHP099_60min_R1 6 GDSPELKPR 9 1 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 GDS(1)PELKPR;GDS(1)PELKPR;GDS(1)PELKPR;GDS(1)PELKPR;GDS(1)PELKPR;GDS(1)PELKPR 131.17 0.00036649 5235870000.0 5766530.0 4916170.0 4254230.0 4791200.0 5024590.0 4787720.0 4468520.0 4815990.0 4842400.0 4436730.0 True False 5446649.085607433 4679989.813878391 4528464.472808671 5246554.207473194 5419996.646993608 4757838.0635654405 4920241.61015256 4799284.454750513 3963142.2269701497 4397424.023923712 1.2385999294076544 1.0642571169888122 1.0297993662135032 1.1930971811974194 1.2325390086347598 1.0819602653009888 1.118891783777165 1.0913854176082458 0.9012417736859355 1.0 22.06822722121007 -7.634187468930635 4.8428789163319195 0.9528005634399189 1.1320290943982185 0.5268301440523078 0.06936209398248505 0.1721108664447226 6.402739812907341 0.052680068377701665 0.018415818172685446 2.3217343728101725e-08 7.634187468930635 0.1792285309582996 GDS(ph)RS(ph)PSHKR ddPTM_KYSE-520_SHP099_60min_R1 3 GDSRSPSHKR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GDS(0.837)RS(0.582)PS(0.582)HKR;GDS(0.995)RS(0.966)PS(0.04)HKR;GDS(0.96)RS(0.905)PS(0.135)HKR 51.54600000000001 0.054554 996540000.0 656263.0 383234.0 398221.0 374287.0 401646.0 565799.0 544259.0 259300.0 512237.0 614778.0 True False 619858.783162143 364822.8633940381 423890.96283612814 409859.1239465102 433253.25514686713 562267.6385685173 599278.0111759645 258400.54882107524 419227.6732439517 609331.5452100461 1.0172766994173392 0.5987263686935459 0.6956655472186432 0.6726372976557866 0.7110304046338484 0.9227614145180927 0.9835007162962226 0.4240721670367493 0.688012423678865 1.0 19.21686790532222 -4.242108679850359 23.457517953006874 0.734340212732092 1.017277301273281 0.18575411330186942 0.17053111558841083 3201.65548895695 3885021.220244995 0.04310214893410066 1.3932895059010484 5.726527098036813e-05 4.242108679850359 0.28293708854118893 GDS(ph)RSPS(ph)HKR ddPTM_KYSE-520_SHP099_60min_R1 1 GDSRSPSHKR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GDS(0.976)RS(0.205)PS(0.819)HKR 55.724 0.043391000000000006 2161700000.0 1192800.0 683290.0 760430.0 710170.0 687990.0 1032600.0 1005600.0 455460.0 924140.0 1089300.0 True False 1126633.0062121516 650463.7227608003 809448.5345310179 777664.3432796041 742130.8988723721 1026155.1603764794 1107255.8617102336 453880.1155651635 756339.4716735907 1079649.649462575 1.043517225030327 0.6024766673935256 0.7497325960638647 0.720293239262114 0.6873812252352306 0.950451992354442 1.025569602381106 0.42039574207345376 0.7005415803636663 1.0 20.04213179746835 -10.073454653032654 4.683710774315745 1.0000099119240082 0.7605111963297179 0.125875709793271 0.1837817513428797 2.116477151118215e-05 4.186936550104066e-06 0.17914122733473778 0.04344614290963426 8.44394404959906e-11 10.073454653032654 -0.23949871559429037 GDSET(ph)DLEALFNAVMNPK ddPTM_KYSE-520_SHP099_60min_R1 1 GDSETDLEALFNAVMNPK 18 0 P46937-6;P46937;P46937-7;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 GDS(0.488)ET(0.512)DLEALFNAVMNPK 85.493 0.010714 6548800.0 25799.0 25513.0 27082.0 20316.0 22590.0 20441.0 18319.0 24554.0 31579.0 21770.0 True False 24367.878040968557 24287.317184206262 28827.749052732062 22246.826531771872 24367.704480482098 20313.420136796034 20170.863296211006 24468.82790494669 25845.049641807876 21577.134736803706 1.129337993121243 1.1256043715007187 1.3360323047694151 1.0310371049324676 1.1293299493986368 0.9414326964436025 0.9348258488559165 1.1340165505483302 1.1977980374625214 1.0 14.397215679247832 -5.314185415624751 24.999582552709853 1.0518718524953803 1.189853363363995 0.32103396540564044 0.09603211490383257 413.8598290698468 196152.65958831605 0.028502765151618037 0.042276459859924134 4.850813576146293e-06 5.314185415624751 0.13798151086861465 GDSIEEILADS(ph)EDEEDNEEEER ddPTM_KYSE-520_SHP099_60min_R1 3 GDSIEEILADSEDEEDNEEEER 22 0 Q5JTH9-2;Q5JTH9-3;Q5JTH9 Q5JTH9-2 RRP12 RRP12-like protein 1 GDSIEEILADS(1)EDEEDNEEEER;GDSIEEILADS(1)EDEEDNEEEER;GDSIEEILADS(1)EDEEDNEEEER 166.49 1.0371e-09 554090000.0 646580.0 643390.0 572920.0 522920.0 578450.0 598420.0 572330.0 624050.0 707440.0 694210.0 True False 610712.9184747246 612480.5786519209 609851.3399044103 572618.1595783696 623970.7240697162 594685.0388073714 630186.7018025237 621885.3162043648 578986.7291111365 688059.8394872067 0.8875869269304735 0.8901559769981444 0.8863347414069638 0.8322214533043044 0.9068553173147637 0.8642926162506083 0.9158893829237086 0.9038244648428252 0.8414772900314026 1.0 19.392174513749847 -10.609406439106422 2.882998154021357 1.0088221559586297 0.8819261310836906 0.6523765924203756 0.026060160421544295 23747699.84170962 23640125.733060524 1579862.1512599653 0.006264598130405463 2.4580661200794802e-11 10.609406439106422 -0.12689602487493912 GDTANEIGQVLHFENVK ddPTM_KYSE-520_SHP099_60min_R1 5 GDTANEIGQVLHFENVK 17 0 P36952;C9JLM5;P36952-2 P36952 SERPINB5 Serpin B5 0 ;;;; 255.32 4.3225e-24 1884484000.0 3079360.0 2803810.0 1892769.0 2078729.0 2882550.0 2918580.0 2182147.0 2571622.0 2281570.0 2370940.0 False True 2908541.762248032 2669110.7589953905 2014779.9182774771 2276290.779167336 3109390.2855340326 2900364.0596277188 2402739.714462411 2562701.643503088 1867294.401699218 2349935.3161634062 1.2377114136897298 1.1358230759104817 0.857376756040623 0.9686610365444844 1.3231812229668267 1.2342314444479958 1.0224705752263918 1.0905413548518654 0.7946152342388019 1.0 21.164189615333765 -7.686005961803092 8.140252083288306 0.8984608094714399 1.1057290288353863 0.2727117353581927 0.13811954248423358 0.33409840216260284 31.257839796769204 0.10171121585455516 0.0378966241407385 2.0606016260455965e-08 7.686005961803092 0.20726821936394635 GDTNIKPILQVINIRPITTGNS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 GDTNIKPILQVINIRPITTGNSPPR 25 2 P27694;I3L524;I3L2M5 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed 1 GDTNIKPILQVINIRPITTGNS(0.999)PPR;GDTNIKPILQVINIRPITTGNS(1)PPR 204.53 4.0004e-16 1456210000.0 1007420.0 1094840.0 1150250.0 857000.0 1009980.0 1173170.0 779360.0 895540.0 1176860.0 676490.0 True False 951536.4043580181 1042242.243011657 1224396.9554650711 938449.0223335547 1089459.679999881 1165847.8108646835 858145.3146206139 892433.5807606074 963171.8902263533 670496.8249012564 1.419151245791731 1.5544327792531267 1.8261040321039361 1.399632313653028 1.6248543461191258 1.7387820009981063 1.2798648446202447 1.3310034404592974 1.4365047744531811 1.0 19.354870974784223 -8.085633583128242 0.545431127242978 0.9972106826624206 1.5973288153741299 0.5538904276942971 0.15148395876560283 0.7904593310599423 0.5532467268493473 0.17573507757611714 0.07771206918545104 8.210439719334037e-09 8.085633583128242 0.6001181327117092 GDTSGDYRK ddPTM_KYSE-520_SHP099_60min_R1 1 GDTSGDYRK 9 1 Q6P452;P09525-2;P09525 Q6P452 ANXA4 Annexin;Annexin A4 0 66.62100000000001 0.067462 288110000.0 525250.0 480230.0 245040.0 194340.0 433690.0 540220.0 350580.0 340500.0 420270.0 580880.0 False True 496113.33544008463 457159.0299600743 260835.67047786224 212810.01516954848 467818.9356414469 536848.286595565 386020.0477310796 339318.8849732972 343959.5621445455 575733.8551178013 0.8617060314067765 0.794045765932133 0.45304904021058906 0.36963262326479873 0.8125611017711059 0.9324591246865621 0.6704834956285414 0.5893676078921377 0.5974280634828529 1.0 19.13504252458335 GDTSHS(ph)PTPGK ddPTM_KYSE-520_SHP099_60min_R1 8 GDTSHSPTPGK 11 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 GDT(0.099)S(0.099)HS(0.611)PT(0.19)PGK;GDT(0.005)S(0.005)HS(0.941)PT(0.05)PGK;GDTSHS(1)PTPGK;GDTS(0.01)HS(0.99)PTPGK;GDTSHS(0.955)PT(0.044)PGK;GDTSHS(0.976)PT(0.024)PGK;GDT(0.001)S(0.001)HS(0.997)PTPGK;GDT(0.01)S(0.01)HS(0.976)PT(0.004)PGK 258.65 2.6973999999999996e-20 5852930000.0 10684390.0 9537280.0 9294500.0 10526420.0 9602940.0 10071140.0 9949590.0 9526130.0 11794310.0 10431660.0 True False 10091705.58789657 9079094.753050871 9893638.3417258 11526847.791916413 10358636.744745493 10008282.279560309 10955391.655840827 9493086.07844546 9652760.614359891 10339243.60810867 0.9760584014078202 0.878119821640578 0.9569015603778406 1.1148637394399288 1.0018756823392394 0.9679897929584713 1.059593145406588 0.9181605964870002 0.9336041378103911 1.0 23.30162730994699 -5.005193617700261 24.927225612872526 1.0002940688252986 0.9246944907738902 0.20629920028876136 0.05804278544558137 333.662695766764 1601474.5496966229 0.015804215233807647 0.031438360674195504 9.881124749261154e-06 5.005193617700261 -0.07559957805140838 GDTVSAS(ph)PCSAPLAR ddPTM_KYSE-520_SHP099_60min_R1 3 GDTVSASPCSAPLAR 15 0 Q15477 Q15477 SKIV2L Helicase SKI2W 1 GDTVSAS(0.999)PCSAPLAR;GDTVS(0.013)AS(0.978)PCS(0.009)APLAR;GDTVS(0.002)AS(0.998)PCSAPLAR 255.91 3.6811000000000004e-22 1393460000.0 1608560.0 1866450.0 1574280.0 1123790.0 1366970.0 1742080.0 1282650.0 1575600.0 2153910.0 1696690.0 True False 1519329.97021514 1776782.9404014319 1675760.6077370585 1230594.6637202168 1474542.7620046316 1731207.0325282335 1412312.7794576688 1570134.6113478045 1762814.239652501 1681658.6466048444 0.9034710898567702 1.0565657566644913 0.99649272527472 0.7317743504038139 0.8768383315969827 1.0294639973596449 0.8398332100923295 0.933682120635957 1.0482592547610683 1.0 20.6814534575396 -9.383825715894762 7.011344894186717 0.999999999908572 0.9327586176534233 0.03777107828035753 0.09751823899394113 0.0 0.0 0.09756244743125063 0.02366236934411114 4.1321329286178414e-10 9.383825715894762 -0.06724138225514875 GDVEGSQS(ph)QDEGEGSGESER ddPTM_KYSE-520_SHP099_60min_R1 3 GDVEGSQSQDEGEGSGESER 20 0 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 GDVEGS(0.014)QS(0.986)QDEGEGSGESER;GDVEGSQS(1)QDEGEGSGESER;GDVEGSQS(1)QDEGEGSGESER 247.35 1.6949000000000004e-26 446176000.0 421529.0 372677.0 421171.0 353779.0 370732.0 400487.0 418881.0 371402.0 485715.0 400364.0 True False 398145.9460727709 354773.03752041847 448320.35655742686 387402.04979246523 399906.49922346574 397987.4120798898 461225.5793646027 370113.69314787886 397521.39987873903 396817.0864384788 1.0033487964094967 0.8940467778355641 1.1297909588047261 0.9762736107698496 1.0077854832631203 1.0029492823807435 1.1623128013569284 0.9327060396257913 1.0017749070398698 1.0 18.598114622110547 -6.582741749458538 24.99999240622274 1.0277388230251194 1.0022233122005553 0.018749947490691588 0.07567444428565626 382.9679982389577 159931.28940234636 0.028864364358209358 0.022358241011715227 2.6137151219994297e-07 6.582741749458538 -0.025515510824564158 GDVTAEEAAGAS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 4 GDVTAEEAAGASPAK 15 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK;GDVTAEEAAGAS(1)PAK 196.22 3.0669e-11 5508920000.0 6658870.0 7477550.0 5586800.0 5324080.0 5863240.0 7786390.0 5872850.0 7557320.0 8156560.0 7711380.0 True False 6289489.206971757 7118317.273968627 5946934.067196051 5830078.9624569835 6324643.630727844 7737792.251795274 6466534.991492586 7531105.4208117565 6675534.31414499 7643063.172562857 0.8229016383836558 0.931343508911719 0.7780825479167061 0.7627935071092776 0.8275011586234314 1.0123941248546102 0.8460658829441862 0.9853517170768642 0.8734108515691573 1.0 22.865719524101344 -6.191986466843241 11.115542835195981 0.9364174321735854 0.8243539492917359 0.4569054315232617 0.06460000466071782 0.8203630605721015 129.48449632485068 0.021080213524060906 0.021081713209639585 6.427077445784817e-07 6.191986466843241 -0.11206348288184953 GDYDAFFEAR ddPTM_KYSE-520_SHP099_60min_R1 1 GDYDAFFEAR 10 0 O75368 O75368 SH3BGRL SH3 domain-binding glutamic acid-rich-like protein 0 112.01 0.0069583 0.0 125630.0 120280.0 85982.0 76069.0 123750.0 121440.0 102160.0 103920.0 113640.0 119200.0 False True 118661.05346280397 114501.56825603926 91524.53729606411 83298.57488902124 133488.42095881636 120682.0479141192 112487.32978551857 103559.52577511026 93005.84063127535 118143.98073619664 1.0043766319992375 0.9691697159900976 0.7746864184340376 0.705059829285915 1.1298791536141166 1.0214828310516286 0.9521207012373419 0.876553550420381 0.7872245378200674 1.0 16.85018660240915 -4.538159884287097 24.939097089591627 0.9056657744278042 0.9955750235204054 0.06965504414901369 0.12128226980936398 591.3297253047491 965059.8273751948 0.03326782384996573 0.088083116791603 2.8962771351591857e-05 4.538159884287097 0.08990924909260123 GDYPLEAVR ddPTM_KYSE-520_SHP099_60min_R1 2 GDYPLEAVR 9 0 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 120.87 0.0056548 2050140000.0 2005950.0 2509000.0 1865630.0 1431600.0 2502330.0 2511910.0 1913210.0 1971280.0 2022920.0 2127300.0 False True 1894675.9547378148 2388463.8739142204 1985891.4949135412 1567658.833573767 2699249.1346899 2496232.2379442933 2106615.937930231 1964442.089780211 1655608.7216633183 2108453.7770143575 0.8986091966506093 1.1328035264289107 0.9418710130442752 0.7435111220667239 1.2802031346933909 1.183916036081684 0.9991283474628839 0.9316979633112603 0.7852241010508263 1.0 21.007753963526888 -7.300703117696966 3.5453423405093165 0.8863831295881742 1.0326651460405964 0.11858995749977119 0.151136093324303 0.5124392742939857 13.439906103649228 0.09438113261421335 0.04319840420689944 5.003764738284772e-08 7.300703117696966 0.14628201645242223 GEAAAERPGEAAVAS(ph)SPSK ddPTM_KYSE-520_SHP099_60min_R1 5 GEAAAERPGEAAVASSPSK 19 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.886)S(0.114)PSK;GEAAAERPGEAAVAS(0.979)S(0.021)PSK;GEAAAERPGEAAVAS(0.75)S(0.247)PS(0.003)K;GEAAAERPGEAAVAS(0.499)S(0.499)PS(0.002)K;GEAAAERPGEAAVAS(0.77)S(0.229)PS(0.001)K 262.98 6.299100000000001e-35 5028330000.0 6123670.0 5471140.0 4504750.0 4988650.0 4947150.0 5993210.0 5258340.0 6564120.0 6287530.0 6072010.0 True False 5783977.817866501 5208298.222051438 4795133.392854843 5462769.796107689 5336462.55956693 5955804.153321622 5789904.323652941 6541350.599797125 5145873.047732865 6018216.715352298 0.9610783545085275 0.8654221787602329 0.7967698106687644 0.9077057298671748 0.8867182442855153 0.989629392728337 0.9620631156207887 1.0869250658771272 0.8550494758033375 1.0 22.520904628227836 -6.229484115682715 4.927278803168748 0.983446947678031 0.8781069510656926 0.3449729224443089 0.06523613366407553 0.21481143777921427 13.816317445378958 0.021709785253986865 0.02107943508895024 5.895435392215153e-07 6.229484115682715 -0.1053399966123384 GEAAAERPGEAAVAS(ph)SPSKANGQENGHVK ddPTM_KYSE-520_SHP099_60min_R1 2 GEAAAERPGEAAVASSPSKANGQENGHVK 29 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.486)S(0.486)PS(0.027)KANGQENGHVK;GEAAAERPGEAAVAS(0.495)S(0.495)PS(0.011)KANGQENGHVK 211.77 1.7831e-22 9618200000.0 1034993.0 902383.0 879538.0 904234.0 878315.0 909586.0 710354.0 872509.0 1343371.0 797566.0 True False 977579.8750826064 859031.1661755019 936234.4267905571 990172.1274921357 947433.3935712543 903908.9363802049 782163.514706952 869482.4699241306 1099448.690027077 790500.1857369582 1.2366598929654138 1.0866931870163377 1.1843569978642516 1.2525893672865236 1.1985239354346164 1.1434645464852349 0.9894539290686768 1.0999143145216845 1.3908266055650524 1.0 19.592406275998012 -6.402642953000644 5.363177013569623 1.1205782320362403 1.1883815415830765 0.08589115412463544 0.11056005677231459 0.67922344514792 27.09807309952572 0.04022025877644615 0.035167927001919785 3.956917969123648e-07 6.402642953000644 0.06780330954683622 GEAAAERPGEAAVASS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 11 GEAAAERPGEAAVASSPSK 19 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.051)S(0.939)PS(0.01)K;GEAAAERPGEAAVAS(0.165)S(0.823)PS(0.012)K;GEAAAERPGEAAVAS(0.062)S(0.927)PS(0.011)K;GEAAAERPGEAAVAS(0.173)S(0.826)PS(0.001)K;GEAAAERPGEAAVAS(0.03)S(0.966)PS(0.004)K;GEAAAERPGEAAVAS(0.004)S(0.98)PS(0.015)K;GEAAAERPGEAAVAS(0.025)S(0.964)PS(0.011)K;GEAAAERPGEAAVAS(0.171)S(0.812)PS(0.017)K;GEAAAERPGEAAVAS(0.219)S(0.668)PS(0.113)K;GEAAAERPGEAAVAS(0.081)S(0.812)PS(0.107)K;GEAAAERPGEAAVAS(0.064)S(0.925)PS(0.01)K 285.87 8.599299999999999e-44 52252020000.0 25678610.0 22613160.0 18181320.0 18916900.0 18456120.0 25274430.0 22387600.0 27081170.0 26611280.0 24029020.0 True False 24254166.314260088 21526789.850554865 19353316.97834055 20714756.488426648 19908511.643041845 25116682.907296196 24650757.08992048 26987231.742062613 21779342.367777623 23816141.577094685 1.0183919269940298 0.9038739453605861 0.8126134502388799 0.8697780209851115 0.8359251467579859 1.054607557903179 1.0350441111598232 1.1331487787265146 0.9144782036702382 1.0 24.505436367149926 -6.268274167451788 24.899441977068175 1.036251809525832 0.8837784927881321 0.48056136152475715 0.07207319069048052 430.1652755082429 1567107.4931913372 0.02524432513464009 0.0227623226539655 5.391701402404047e-07 6.268274167451788 -0.15247331673769982 GEAAAERPGEAAVASS(ph)PSKANGQENGHVK ddPTM_KYSE-520_SHP099_60min_R1 8 GEAAAERPGEAAVASSPSKANGQENGHVK 29 2 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEAAAERPGEAAVAS(0.132)S(0.434)PS(0.434)KANGQENGHVK;GEAAAERPGEAAVAS(0.196)S(0.78)PS(0.024)KANGQENGHVK;GEAAAERPGEAAVAS(0.03)S(0.968)PS(0.002)KANGQENGHVK;GEAAAERPGEAAVAS(0.106)S(0.881)PS(0.013)KANGQENGHVK;GEAAAERPGEAAVAS(0.108)S(0.729)PS(0.162)KANGQENGHVK;GEAAAERPGEAAVAS(0.295)S(0.704)PS(0.001)KANGQENGHVK;GEAAAERPGEAAVAS(0.034)S(0.855)PS(0.112)KANGQENGHVK;GEAAAERPGEAAVAS(0.162)S(0.782)PS(0.056)KANGQENGHVK 265.43 2.5701e-41 33459780000.0 11081870.0 10761660.0 10457130.0 9264500.0 8993770.0 8845430.0 8376940.0 9138210.0 12863170.0 8533100.0 True False 10467136.579939835 10244653.700019024 11131213.331799585 10144995.29452651 9701528.531448683 8790222.390324337 9223762.84625589 9106511.682384247 10527542.58212781 8457503.372651344 1.2376154189647683 1.2113094430617326 1.3161346607078042 1.1995260122900966 1.1470912991675637 1.0393400987280588 1.0906011431319513 1.0767375762251035 1.2447577161092551 1.0 23.011800416656047 -5.765292545748816 2.6055089747024254 1.0954881259782638 1.2506639604953922 0.5493158373248584 0.06499059611964514 0.2129139712792262 2.9619316272121265 0.02084168505807178 0.02622911510752035 1.7167515740110425e-06 5.765292545748816 0.15517583451712835 GEADRDTYR ddPTM_KYSE-520_SHP099_60min_R1 4 GEADRDTYR 9 1 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 0 ;;; 134.59 0.00054675 4091570000.0 1054370.0 1087550.0 767680.0 616922.0 1130620.0 1056600.0 756180.0 886570.0 868950.0 961760.0 False True 995881.994265514 1035302.4655541697 817165.8811314286 675554.081395637 1219593.361652177 1050005.3674741306 832622.0540056134 883494.6955969938 711170.5844469088 953239.5546379578 1.0447342322505195 1.0860884449422366 0.8572513353600709 0.7086928758975111 1.2794195915583684 1.101512586595218 0.873465699104193 0.9268338596508899 0.7460565195671226 1.0 19.862479291781245 -6.791408543330613 24.309472958167397 0.8804916837495985 1.0074795346617376 0.1382820708526843 0.1538684168325108 348.58314488420245 282749.0495763324 0.06842254080592122 0.046138660477787974 1.616558616111653e-07 6.791408543330613 0.12698785091213904 GEADRDTYRR ddPTM_KYSE-520_SHP099_60min_R1 1 GEADRDTYRR 10 2 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;S4R435 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 0 141.1 0.00015629 402470000.0 160830.0 174990.0 166130.0 62088.0 206010.0 150090.0 76079.0 108550.0 159580.0 117440.0 False True 151908.4392933437 166583.21773465505 176839.00561739824 67988.82485256217 222221.8149634406 149153.23263694154 83769.80777948775 108173.46538576038 130604.2946844328 116399.57296693741 1.3050601082230118 1.4311325504774144 1.5192410170407435 0.5840985763055504 1.9091291256417355 1.2813898611063428 0.7196745283875058 0.9293287134007476 1.1220341394339148 1.0 16.82872623990284 -6.637558550994385 7.256325279064368 0.9389229960053032 1.3475095062201439 0.27028955949843503 0.3197717645847229 0.30959500085111163 18.47882110015724 0.12135564326148592 0.0936236120055267 2.3037823622973308e-07 6.637558550994385 0.4085865102148407 GEAEDILETEK ddPTM_KYSE-520_SHP099_60min_R1 1 GEAEDILETEK 11 0 Q9HBL7 Q9HBL7 PLGRKT Plasminogen receptor (KT) 0 83.948 0.038411 467080000.0 80045.0 74471.0 64402.0 61187.0 74502.0 73793.0 56818.0 75402.0 101710.0 79122.0 False True 75604.74428424849 70893.30137675014 68553.45596684329 67002.19408345761 80364.88354160586 73332.43051487651 62561.71793024272 75140.44806095911 83242.02790044904 78421.04063598451 0.964087490692597 0.9040086793265509 0.874171719871142 0.8543905250437698 1.0247872623196153 0.9351116730938531 0.7977669949655765 0.9581669339195168 1.0614756859302932 1.0 16.258953165887668 -7.5399393335312785 8.191462566362752 1.024571390444694 0.9075626501092023 0.40140918532621683 0.05972916883565894 0.19062415130818036 68.11235243318684 0.040564033300302046 0.01571579774348352 2.884434400780552e-08 7.5399393335312785 -0.11700874033549169 GEAEQS(ph)EEEADEEDKAEDAR ddPTM_KYSE-520_SHP099_60min_R1 9 GEAEQSEEEADEEDKAEDAR 20 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GEAEQS(1)EEEADEEDKAEDAR;GEAEQS(1)EEEADEEDKAEDAR;GEAEQS(1)EEEADEEDKAEDAR;GEAEQS(1)EEEADEEDKAEDAR;GEAEQS(1)EEEADEEDKAEDAR;GEAEQS(1)EEEADEEDKAEDAR;GEAEQS(1)EEEADEEDKAEDAR;GEAEQS(1)EEEADEEDKAEDAR;GEAEQS(1)EEEADEEDKAEDAR 214.78 6.3012e-19 13925880000.0 11887290.0 9151170.0 8211010.0 9985340.0 10197770.0 9949020.0 12596040.0 11948200.0 10037160.0 9918680.0 True False 11227878.326974884 8711534.05701379 8740304.842680503 10934343.711398067 11000276.481625771 9886924.475778405 13869370.64870383 11906754.482930845 8214664.7602130715 9830808.211816274 1.1421114200437135 0.8861462729527001 0.8890728670888904 1.1122527747266377 1.1189595244472208 1.0057082045293775 1.410806756664559 1.2111674062178692 0.8356042131245469 1.0 23.22887859781762 -5.286341697220774 20.181348857037452 1.1179226757664662 0.9638139843592624 0.1129209032007541 0.1562430604192128 122.24040556344497 99065.52899742262 0.04484507416288062 0.06660986492335784 5.171997458279495e-06 5.286341697220774 -0.15410869140720385 GEAEQS(ph)EEEADEEDKAEDAREEEYEPEK ddPTM_KYSE-520_SHP099_60min_R1 1 GEAEQSEEEADEEDKAEDAREEEYEPEK 28 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GEAEQS(1)EEEADEEDKAEDAREEEYEPEK 252.72 9.6239e-32 3116900000.0 1380300.0 1152700.0 1248500.0 1471200.0 1277500.0 1233000.0 1290400.0 1655900.0 1452100.0 1162400.0 True False 1303732.007440169 1097322.5617620265 1328980.3076706298 1611022.4056675895 1378031.982019297 1225304.389641873 1420846.2250903791 1650156.0693899638 1188435.2444621166 1152102.0403335148 1.1316115776192532 0.9524525808880344 1.1535265637459609 1.3983330896638502 1.1961023709500411 1.0635380780049373 1.2332642208315743 1.4323002751668337 1.031536446301305 1.0 20.13583706957983 -4.984988775652733 17.383787858329434 1.213164575473274 1.0447651098899247 0.141939467810676 0.14137993586995443 10.68220197288319 12361.049124585783 0.03609964289269856 0.07488828875925593 1.0351689202895766e-05 4.984988775652733 -0.1683994655833494 GEAEQS(ph)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK ddPTM_KYSE-520_SHP099_60min_R1 6 GEAEQSEEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK 41 3 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK;GEAEQS(1)EEEADEEDKAEDAREEEYEPEKMEAEDYVMAVVDK 197.16 3.6935e-16 6902000000.0 2926420.0 2949802.0 2542688.0 3124415.0 2862946.0 2751815.0 2364359.0 3155534.0 3760815.0 2746835.0 True False 2764085.6489263577 2808089.0841769283 2706593.7369246413 3421358.462210376 3088243.5622655284 2734639.901851057 2603371.4816401615 3144588.18906117 3077945.798431101 2722500.1789052906 1.015274735459444 1.031437612358965 0.9941574137978404 1.256697240543835 1.134340995161037 1.0044590347651134 0.9562429056247003 1.1550369081428673 1.1305585293547102 1.0 21.376500713071046 GEAERGS(ph)GGS(ph)S(ph)GDELREDDEPVK ddPTM_KYSE-520_SHP099_60min_R1 3 GEAERGSGGSSGDELREDDEPVK 23 2 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 3 GEAERGS(1)GGS(1)S(1)GDELREDDEPVK;GEAERGS(1)GGS(1)S(1)GDELREDDEPVK;GEAERGS(1)GGS(1)S(1)GDELREDDEPVK 81.57600000000001 0.0026575 2792100000.0 3598600.0 3311990.0 2997820.0 3250780.0 2934040.0 3185740.0 3191770.0 3475950.0 3847010.0 3029960.0 True False 3398978.484368751 3152877.0290016592 3191064.2738815895 3559733.1538173533 3164932.255596002 3165856.6149697467 3514425.2602733425 3463892.740742827 3148489.9592302274 3003116.911673209 1.1318169036832417 1.0498682274893554 1.0625840977012326 1.185346178159285 1.0538824656788457 1.0541902656749602 1.1702592218813266 1.1534325311407516 1.0484073886674037 1.0 21.518029209589862 GEAVLRPGLDAEPELS(ph)PEEQR ddPTM_KYSE-520_SHP099_60min_R1 3 GEAVLRPGLDAEPELSPEEQR 21 1 C9JQV0;Q9BRJ6 C9JQV0 C7orf50 Uncharacterized protein C7orf50 1 GEAVLRPGLDAEPELS(1)PEEQR;GEAVLRPGLDAEPELS(1)PEEQR;GEAVLRPGLDAEPELS(1)PEEQR 169.01 2.3348000000000003e-09 864630000.0 384440.0 367330.0 362536.0 297019.0 330792.0 363436.0 339530.0 321448.0 375010.0 338320.0 True False 363114.3468378599 349682.9154264292 385905.6506381093 325247.5964579812 356823.4484509801 361167.66111426096 373853.0058934727 320332.97191452753 306917.63723279285 335322.74800897733 1.082880147541134 1.0428249127227938 1.1508484077786985 0.9699538679948836 1.0641194209747653 1.0770747384683597 1.1149049926176313 0.9552974673401863 0.9152902362131901 1.0 18.35519083208843 -7.277440355039225 23.94189096097617 0.9514703453448662 1.069716951820159 0.5431304219929154 0.04820543714893924 357.6008478367413 535065.6532064561 0.025627891085041068 0.01238535176433383 5.2790970365361425e-08 7.277440355039225 0.11824660647529284 GEDS(ph)AEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_KYSE-520_SHP099_60min_R1 2 GEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 41 1 Q12906-7;Q12906-4;Q12906-6 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 GEDS(0.5)AEET(0.5)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK;GEDS(0.5)AEET(0.5)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 121.28 2.4055999999999998e-05 1221290000.0 325606.0 363929.0 280444.0 306080.0 293450.0 379614.0 332352.0 390583.0 381721.0 383233.0 True False 307543.98610053095 346445.3045714344 298521.8689662651 335169.7511736925 316542.84549789643 377244.68821533694 365949.3836029436 389228.15873575764 312410.08880333597 379837.85377076187 0.8096717666431914 0.9120873581507745 0.78591921790509 0.8824021825270021 0.8333630846833265 0.993172967018211 0.9634357923257428 1.0247218776953784 0.822482766533007 1.0 18.535024162773198 -6.256325330203046 24.941033500520042 0.9624748688045582 0.8472633064637168 0.47868691565131005 0.06052292896126163 362.8154913927897 1769440.421318823 0.019176026916208434 0.018621250664178367 5.542103981481064e-07 6.256325330203046 -0.1152115623408414 GEDSAEET(ph)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK ddPTM_KYSE-520_SHP099_60min_R1 3 GEDSAEETEAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 41 1 Q12906-7;Q12906-4;Q12906-6 Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 GEDS(0.462)AEET(0.538)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK;GEDS(0.456)AEET(0.544)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK;GEDS(0.421)AEET(0.579)EAKPAVVAPAPVVEAVSTPSAAFPSDATAENVK 209.44 2.4027e-22 1464720000.0 1733850.0 1766430.0 1374760.0 1443580.0 1431800.0 1925400.0 1657490.0 1864460.0 1859420.0 1892850.0 True False 1637669.8841557147 1681568.0513345157 1463379.229293773 1580777.4091718453 1544474.5141723908 1913382.8644091357 1825045.2647435325 1857992.6234282376 1521796.200163728 1876080.8216150154 0.8729207533532239 0.8963196211807899 0.780019289379031 0.8425955806163193 0.8232451909203129 1.0198829615250844 0.9727967173463512 0.990358518685135 0.8111570581771083 1.0 20.83929054985953 -6.248418494040145 24.856783454174106 0.959108813511016 0.8424575389227591 0.47870861938515863 0.06042848313358096 651.753080223915 1244192.7892302473 0.02003824570247009 0.01991816142050489 5.643928535010386e-07 6.248418494040145 -0.11665127458825686 GEDVPS(ph)EEEEEEENGFEDR ddPTM_KYSE-520_SHP099_60min_R1 4 GEDVPSEEEEEEENGFEDR 19 0 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 GEDVPS(1)EEEEEEENGFEDR;GEDVPS(1)EEEEEEENGFEDR;GEDVPS(1)EEEEEEENGFEDR;GEDVPS(1)EEEEEEENGFEDR 449.06 1.8091999999999994e-124 3982660000.0 3037356.0 2647374.0 2736592.0 2750593.0 2765011.0 2651589.0 2790959.0 2902208.0 3276826.0 3018965.0 True False 2868867.8078609286 2520190.1792506124 2912997.099022015 3012008.531724058 2982601.634939459 2635039.4494940042 3073096.372854945 2892140.9178284365 2681837.000461277 2992219.3188192253 0.9587759125200177 0.8422478136546212 0.9735239261042962 1.0066135569610057 0.996785769071379 0.8806304514248743 1.0270291196661463 0.9665537882329156 0.8962701977071554 1.0 21.512784492737133 -4.798054245642551 24.998263095076005 0.9685655051084703 0.9005117639754343 0.2182847005711681 0.051407570771035416 214.76491282547474 146626.99534925938 0.013108380245339772 0.02728849532488244 1.592009864308855e-05 4.798054245642551 -0.06805374113303597 GEEGHDPKEPEQLRK ddPTM_KYSE-520_SHP099_60min_R1 2 GEEGHDPKEPEQLRK 15 2 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 154.69 3.6052e-06 842270000.0 1407550.0 1339870.0 1091560.0 799810.0 1290010.0 1212860.0 831900.0 1050840.0 1279880.0 905540.0 False True 1329470.3956186383 1275500.6340141268 1161923.704157751 875823.7019283542 1391526.4478471319 1205290.0908524252 915996.5705615991 1047194.8813078996 1047486.0551492157 897517.6200994586 1.4812749809539256 1.4211427223821878 1.2945970955188515 0.9758289779662483 1.550416857212151 1.342915240726818 1.020588955635314 1.1667680476198945 1.167092468929065 1.0 19.77558073669348 -1.0000000000480591 0.11901780022743845 0.9124580907330221 2.611058624500382 0.3840683392459997 0.15441499913193216 111.4628337755991 0.9152999119681599 1.1616333954724178 31.36025535868409 0.09999999998893398 1.0000000000480591 1.69860053376736 GEEGS(ph)DDDETENGPKPK ddPTM_KYSE-520_SHP099_60min_R1 13 GEEGSDDDETENGPKPK 17 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 GEEGS(1)DDDETENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(0.999)DDDET(0.001)ENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(1)DDDETENGPKPK;GEEGS(1)DDDETENGPKPK 287.84 1.0618e-37 37815120000.0 27104510.0 23719200.0 22747890.0 22867810.0 23654750.0 22881200.0 23496960.0 24598880.0 27743890.0 22796210.0 True False 25600968.79879888 22579694.02875494 24214255.387310907 25041159.786942244 25516244.247883346 22738389.943449803 25872262.025030714 24513552.226701736 22706298.942552228 22594253.31458303 1.133074346045117 0.9993556199611742 1.071699739317443 1.108297735636163 1.1293245186117469 1.0063793490698691 1.1450815242622758 1.0849463306176148 1.0049590321224238 1.0 24.429452544427 -7.767545573687679 8.713986982172038 1.0020635902157955 1.0831883042782486 0.3280673981065062 0.04706623728597016 0.15004129663899096 102.85205099409983 0.03816277803995843 0.011637393733339847 1.707868491558185e-08 7.767545573687679 0.08112471406245314 GEEHCGHLIEAHK ddPTM_KYSE-520_SHP099_60min_R1 10 GEEHCGHLIEAHK 13 0 H7C4E5;C9J8T6;Q14061 H7C4E5 COX17 Cytochrome c oxidase copper chaperone 0 ;;;;;;;;; 228.07 4.1031e-12 16042742000.0 11280190.0 9473147.0 7044024.0 7129793.0 10915560.0 10182470.0 8247050.0 10199580.0 8537521.0 6970331.0 False True 10654455.374198731 9018042.79863646 7498093.057876894 7807406.383069566 11774552.470959326 10118917.427734533 9080742.29745165 10164200.037579874 6987322.399790281 6908579.290175457 1.5422064257625594 1.3053396971879336 1.0853306798605862 1.1301030291672722 1.7043377482406066 1.4646886143616287 1.3144152966971343 1.4712431616778525 1.011397873036907 1.0 22.719957628453848 -9.751026039537484 7.341820918037226 0.9999999997702949 1.3400778177861856 0.1932400616433323 0.20619282077391926 6.262459586927467e-10 0.0 0.20490150289911402 0.049695914076520624 1.7740831067812694e-10 9.751026039537484 0.34007781801589076 GEEHCGHLIEAHKECMR ddPTM_KYSE-520_SHP099_60min_R1 4 GEEHCGHLIEAHKECMR 17 1 H7C4E5;C9J8T6;Q14061 H7C4E5 COX17 Cytochrome c oxidase copper chaperone 0 ;;; 192.24 9.6515e-12 6124600000.0 2908970.0 3442230.0 2990560.0 2266160.0 2738910.0 2451830.0 2116450.0 2128480.0 3597520.0 1615690.0 False True 2747603.635212075 3276860.1039074287 3183336.2826651847 2481535.1650541495 2954446.634733833 2436527.2195098405 2330401.42056148 2121096.799670965 2944301.0540991332 1601376.2435878008 1.71577644305264 2.0462774548008738 1.987875301267792 1.5496265633954942 1.8449422155249087 1.5215207726892008 1.4552491520295916 1.3245461884202536 1.8386066771557563 1.0 20.610880878419607 -8.804513182073812 0.0868056141885189 1.0206138783071196e-13 2.666277260731593 0.5867042355481585 0.19682858943152567 25.677145264938048 0.7990532094993087 15.091837252293718 8.864898150190594 1.5685082882662053e-09 8.804513182073812 2.666277260731491 GEELGKSS(ph)DLEDNRSEDSVRPWTCPK ddPTM_KYSE-520_SHP099_60min_R1 1 GEELGKSSDLEDNRSEDSVRPWTCPK 26 3 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 GEELGKS(0.328)S(0.672)DLEDNRSEDSVRPWTCPK 83.022 0.0056694 586490000.0 363660.0 404920.0 351030.0 387090.0 358800.0 279510.0 311790.0 404870.0 447330.0 305940.0 True False 343487.054861763 385467.03540268925 373657.9554678586 423878.91721714806 387035.5187072586 277765.4744110299 343308.77597716224 403465.60046736855 366106.14827163366 303229.60961771844 1.1327622500150865 1.2712051302926766 1.2322607806636336 1.39788102405808 1.276377723122733 0.9160235860911103 1.1321743163867526 1.3305613557199036 1.2073561969531394 1.0 18.210051110409342 -6.114397566106243 19.885688326317894 1.1340746753287596 1.2685582045123063 0.25816200104427156 0.12085748063576984 7.871901687007459 1346.714114105441 0.04213577653275082 0.04213590392862918 7.684266775412325e-07 6.114397566106243 0.13448352918354667 GEEQGCQGDGDAGVKAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 GEEQGCQGDGDAGVKASPR 19 1 Q13671;Q13671-2;E9PNR2 Q13671 RIN1 Ras and Rab interactor 1 1 GEEQGCQGDGDAGVKAS(1)PR 114.62 2.7159000000000002e-05 19753000.0 56442.0 51145.0 52568.0 52918.0 62755.0 58955.0 51871.0 53168.0 66242.0 62335.0 True False 53311.04974566247 48687.917429789886 55956.617391773885 57947.31080962313 67693.46147289299 58587.039976753134 57114.62689217536 52983.572617504506 54214.122624929136 61782.760395896155 0.8628790524096361 0.7880502120300847 0.9056995354887176 0.937920391356813 1.0956690999094538 0.9482748844715703 0.9244427818730017 0.8575785911473109 0.8774959596743793 1.0 15.914916710218849 -4.948570252229026 4.144529138382805 0.9466837404550641 0.8262083857536175 0.3641940912695142 0.06427681493809521 0.24548071383664408 8.869534991591134 0.018957143421237558 0.041342884094417595 1.1257183560111554e-05 4.948570252229026 -0.12047535470144655 GEES(ph)S(ph)EEEEK ddPTM_KYSE-520_SHP099_60min_R1 2 GEESSEEEEK 10 0 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 GEES(1)S(1)EEEEK;GEES(1)S(1)EEEEK 156.14 0.00094485 215320000.0 2008500.0 1747220.0 1584530.0 1932330.0 1846830.0 1956980.0 2041400.0 1929620.0 2100200.0 1855680.0 True False 1897084.501154515 1663280.9285693124 1686671.3391376385 2115978.062223802 1992165.0139747139 1944765.761915127 2247764.634144067 1922926.598596693 1718856.6217335844 1839240.1188971945 1.0314501525184236 0.9043304957737727 0.9170479274609147 1.1504631942742414 1.0831456934340975 1.0573745874362537 1.2221159222493596 1.0455005732202476 0.9345471556830808 1.0 20.81067840999202 -5.249719381248571 24.71784424644764 1.0786490906451605 0.9462816133608302 0.3147456149253728 0.08008176183684299 726.8332779867893 1532910.3956399234 0.02217251058500146 0.03797625232453656 5.627047986406696e-06 5.249719381248571 -0.1323674772843303 GEES(ph)S(ph)EEEEKGYK ddPTM_KYSE-520_SHP099_60min_R1 10 GEESSEEEEKGYK 13 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 GEES(1)S(0.997)EEEEKGY(0.003)K;GEES(1)S(1)EEEEKGYK;GEES(1)S(1)EEEEKGYK;GEES(1)S(1)EEEEKGYK;GEES(1)S(1)EEEEKGYK;GEES(1)S(1)EEEEKGYK;GEES(0.999)S(0.999)EEEEKGY(0.001)K;GEES(1)S(0.999)EEEEKGY(0.001)K;GEES(1)S(1)EEEEKGYK;GEES(1)S(1)EEEEKGYK 187.37 1.0495999999999998e-07 10393370000.0 26494000.0 24941640.0 22570730.0 23386980.0 23598640.0 23405060.0 21651640.0 23499920.0 29493600.0 22310460.0 True False 25024325.0055204 23743406.176235124 24025675.370244853 25609671.547648087 25455718.710105557 23258980.33887382 23840399.07084305 23418404.262442548 24138305.713151947 22112806.681675203 1.131666611378553 1.07374005109497 1.0865050156728786 1.158137540670978 1.1511753834125729 1.0518330248031538 1.078126328061263 1.0590425991400398 1.0915984596905677 1.0 24.398378815948696 -6.277159286279722 24.87181830075006 1.0611856316411734 1.117892023673607 0.48155792962795463 0.03301429669794563 810.5085816177856 1282371.8367926786 0.012013742550435373 0.010634381696770279 5.282514693365046e-07 6.277159286279722 0.05670639203243355 GEFSAS(ph)PMLK ddPTM_KYSE-520_SHP099_60min_R1 22 GEFSASPMLK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEFS(0.004)AS(0.996)PMLK;GEFSAS(1)PMLK;GEFSAS(1)PMLK;GEFS(0.014)AS(0.986)PMLK;GEFSAS(1)PMLK;GEFSAS(1)PMLK;GEFSAS(1)PMLK;GEFSAS(1)PMLK;GEFSAS(1)PMLK;GEFS(0.001)AS(0.999)PMLK;GEFSAS(1)PMLK;GEFS(0.001)AS(0.999)PMLK;GEFS(0.007)AS(0.993)PMLK;GEFS(0.034)AS(0.966)PMLK;GEFS(0.002)AS(0.998)PMLK;GEFS(0.001)AS(0.999)PMLK;GEFS(0.001)AS(0.999)PMLK;GEFSAS(1)PMLK;GEFS(0.002)AS(0.998)PMLK;GEFSAS(1)PMLK;GEFS(0.004)AS(0.996)PMLK;GEFS(0.002)AS(0.998)PMLK 220.45 3.0256e-09 165014040000.0 113682300.0 102639300.0 101675800.0 78649600.0 85913600.0 93370400.0 86906000.0 93397600.0 116888400.0 91633400.0 True False 107376116.19895348 97708353.96326967 108229984.75503209 86124434.3371355 92674511.53848371 92787640.69960864 95691306.60082504 93073625.52476361 95664413.07677555 90821599.36570649 1.1822751080014327 1.0758272772739077 1.1916767102859331 0.9482814103541916 1.0204016686087656 1.0216472881741006 1.0536183822915293 1.0247961517390705 1.0533222685450492 1.0 26.436532107014926 -5.254871638172789 24.999999999994543 1.0202777078337486 1.1425164574696338 0.6925586394687042 0.04033043444362545 309.0908594209717 1176546.9309581504 0.010681781862636325 0.01796696425083338 5.560685868566519e-06 5.254871638172789 0.12223874963588521 GEGDAPFSEPGTTSTQRPS(ph)S(ph)PETATK ddPTM_KYSE-520_SHP099_60min_R1 6 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GEGDAPFS(0.06)EPGT(0.056)T(0.056)S(0.067)T(0.033)QRPS(0.823)S(0.823)PET(0.072)AT(0.008)K;GEGDAPFSEPGT(0.001)T(0.001)S(0.012)T(0.012)QRPS(0.975)S(0.975)PET(0.021)AT(0.002)K;GEGDAPFSEPGTTSTQRPS(0.999)S(0.982)PET(0.019)AT(0.001)K;GEGDAPFSEPGTTST(0.002)QRPS(0.995)S(0.995)PET(0.006)AT(0.001)K;GEGDAPFSEPGTTSTQRPS(1)S(0.996)PET(0.004)ATK;GEGDAPFSEPGTTSTQRPS(0.996)S(0.909)PET(0.093)AT(0.002)K 203.25 4.8931e-16 4601330000.0 6040680.0 5036380.0 5101190.0 5307330.0 5406570.0 5276660.0 5333420.0 5683520.0 6127280.0 5319270.0 True False 5705591.438602965 4794424.7450395 5430020.869592578 5811737.047493055 5832036.299824703 5243726.407662362 5872574.14276312 5663805.195663542 5014720.408159114 5272145.40612944 1.0822143547045566 0.9093878062364255 1.029945202816218 1.1023476402483667 1.1061979233433752 0.9946095950931023 1.11388698345376 1.074288502945832 0.9511726293301696 1.0 22.329958729846354 -4.992066491465168 24.97194902692613 1.055722530463058 0.9892674302052678 0.08899377413328957 0.06421823983247425 333.190486626668 1048747.2980779398 0.016163709428744216 0.03355226659748438 1.0184354513515833e-05 4.992066491465168 -0.06645510025779022 GEGDAPFSEPGTTSTQRPS(ph)SPETATK ddPTM_KYSE-520_SHP099_60min_R1 3 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFSEPGTTSTQRPS(0.5)S(0.5)PETATK;GEGDAPFSEPGT(0.036)T(0.036)S(0.036)T(0.031)QRPS(0.421)S(0.421)PET(0.017)AT(0.003)K;GEGDAPFSEPGT(0.001)T(0.001)S(0.022)T(0.022)QRPS(0.555)S(0.4)PETATK 142.89 5.7081999999999995e-08 10303100000.0 7572700.0 7717300.0 5869800.0 5667000.0 5648000.0 7919600.0 6274900.0 6967300.0 8309500.0 8297500.0 True False 7152627.235196817 7346549.324096533 6248176.700012071 6205589.976154319 6092465.467275911 7870170.838773547 6909228.129122456 6943132.06248005 6800704.265448639 8223990.605357327 0.8697270678467708 0.8933071153207294 0.7597499802519038 0.7545716275638535 0.7408161997786229 0.9569771193131845 0.8401308392329145 0.8442534039322843 0.8269348290619981 1.0 22.971407185800015 -6.25516216640476 24.955631516976666 0.8805795510020868 0.8034524864364732 0.2939103789573505 0.06827884621839793 807.0423355455383 3208473.584858122 0.023901960634396507 0.023341843022560194 5.556967202886147e-07 6.25516216640476 -0.07712706456561369 GEGDAPFSEPGTTSTQRPSS(ph)PETATK ddPTM_KYSE-520_SHP099_60min_R1 9 GEGDAPFSEPGTTSTQRPSSPETATK 26 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GEGDAPFSEPGTTSTQRPS(0.049)S(0.951)PETATK;GEGDAPFSEPGTTSTQRPS(0.249)S(0.75)PET(0.001)ATK;GEGDAPFSEPGTTSTQRPS(0.053)S(0.947)PETATK;GEGDAPFSEPGTTSTQRPS(0.015)S(0.985)PETATK;GEGDAPFSEPGTTSTQRPS(0.065)S(0.935)PETATK;GEGDAPFSEPGTTSTQRPS(0.034)S(0.958)PET(0.008)ATK;GEGDAPFSEPGTTSTQRPS(0.054)S(0.946)PETATK;GEGDAPFSEPGTT(0.001)S(0.001)T(0.001)QRPS(0.225)S(0.764)PET(0.008)AT(0.001)K;GEGDAPFSEPGT(0.001)T(0.001)S(0.001)T(0.004)QRPS(0.442)S(0.551)PETATK 288.21 4.1917e-49 59698040000.0 21540330.0 22117650.0 17111800.0 15595900.0 15707580.0 22155510.0 17714820.0 21659140.0 23959390.0 21947600.0 True False 20345444.955316726 21055084.8947305 18214854.007848043 17078129.64692167 16943677.18209524 22017229.243920866 19505606.885582414 21584009.498621266 19608968.74307086 21753161.338974442 0.9352868136395626 0.967909195662829 0.8373428452081156 0.7850872514940314 0.7789064273493801 1.0121392886685072 0.8966791806317752 0.9922240341200379 0.9014307593047682 1.0 24.374721744098693 -6.271353601688745 24.99398302029155 0.9560201851578809 0.8613298255964079 0.3652889757954647 0.0655029655760091 910.2566932880818 2294772.086092034 0.02495915396848178 0.022275778993905957 5.353605905050454e-07 6.271353601688745 -0.09469035956147298 GEGDIHENVDTDLPGS(ph)LGQSEEKPVPAAPVPSPVAPAPVPSR ddPTM_KYSE-520_SHP099_60min_R1 2 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSR 42 1 Q9UK76-3;Q9UK76 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 GEGDIHENVDT(0.002)DLPGS(0.997)LGQSEEKPVPAAPVPSPVAPAPVPSR;GEGDIHENVDT(0.055)DLPGS(0.894)LGQS(0.051)EEKPVPAAPVPSPVAPAPVPSR 118.07 2.2376e-05 1581730000.0 251768.0 251508.0 202134.0 237813.0 208240.0 243018.0 191154.0 315682.0 264875.0 290656.0 True False 237801.92715293466 239425.17815879523 215163.8810658348 260414.67601891418 224627.3032764763 241501.23451905014 210477.71180325985 314586.972822733 216780.37695537703 288081.01396694593 0.8254689327781238 0.8311036359593853 0.7468867111475886 0.9039633415369533 0.7797365754282223 0.8383101378099138 0.7306198659360794 1.0920086974521281 0.7524979656599311 1.0 18.136115056981385 -8.042445091846764 0.5071645951915824 0.9986303414547345 0.8079973851294873 0.2106561830865915 0.09909437812776523 1.574640592501905 0.9850217401683053 0.11134658593447985 0.05211673834379538 9.06890616147016e-09 8.042445091846764 -0.19063295632524724 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(ph)PVAPAPVPSR ddPTM_KYSE-520_SHP099_60min_R1 11 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSR 42 1 Q9UK76-3;Q9UK76 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(0.994)PVAPAPVPS(0.006)R;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSR;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSR;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSR;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSR;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSR;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSR;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(0.973)PVAPAPVPS(0.027)R;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSR;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSR;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSR 353.91 1.2655999999999997e-83 58138180000.0 5417595.0 6293725.0 4070617.0 4015639.0 4257576.0 6513064.0 4808308.0 6620855.0 6455330.0 7419960.0 True False 5117070.205642118 5991365.003926172 4333015.485037483 4397284.123214107 4592623.008906288 6472413.551677583 5294378.697203877 6597888.799324179 5283204.797626637 7354224.927041525 0.6958000681793975 0.8146834048950407 0.5891872397191663 0.5979262487669189 0.6244876998552475 0.8800945872458269 0.7199098137094526 0.897156242130113 0.7183904286365058 1.0 22.810141870989796 -6.2591668170822095 24.97644791268033 0.8289824561406779 0.6648917126413124 0.4512138000607091 0.09791601726132844 209.0319644732071 2297358.5491902926 0.032877365971548334 0.03140222585509781 5.505961659991266e-07 6.2591668170822095 -0.16409074349936548 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(ph)PVAPAPVPSRR ddPTM_KYSE-520_SHP099_60min_R1 2 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPSPVAPAPVPSRR 43 2 Q9UK76-3;Q9UK76 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSRR;GEGDIHENVDTDLPGSLGQSEEKPVPAAPVPS(1)PVAPAPVPSRR 274.72 8.975899999999999e-43 1801650000.0 420240.0 500060.0 511120.0 354303.0 342817.0 324342.0 220044.0 308631.0 646000.0 309127.0 True False 396928.44947232894 476036.3669946377 544067.6130209155 387975.85059491836 369794.7475380893 322317.66126944363 242288.19494248915 307560.43109601707 528702.6843347761 306388.3752771666 1.2955075371683327 1.5537024424115415 1.7757449594121786 1.2662877638355101 1.206947708781587 1.051990503810293 0.7907878186413214 1.0038253925847878 1.7255964226987999 1.0 18.22500203525016 -5.529337465514781 3.3730795082653926 1.1107371916005406 1.5436603305718255 0.34169328460193005 0.2526066526578248 0.2696888758461009 6.453078607527442 0.07858419275864585 0.11172588047372309 2.955714856268644e-06 5.529337465514781 0.43292313897128487 GEGGS(ph)EDGS(ph)EDGLPEGIHLDK ddPTM_KYSE-520_SHP099_60min_R1 1 GEGGSEDGSEDGLPEGIHLDK 21 0 O75362 O75362 ZNF217 Zinc finger protein 217 2 GEGGS(1)EDGS(1)EDGLPEGIHLDK 79.558 0.0014512000000000001 0.0 81034.0 53621.0 44012.0 64861.0 58899.0 63012.0 72929.0 78343.0 65975.0 62237.0 True False 76538.88248272594 51044.96667323814 46849.083941689816 71025.36993882919 63534.016210531925 62618.7187348854 80301.37503845032 78071.24641839368 53995.60309440684 61685.628599653304 1.2407895359139798 0.8275017671381082 0.7594813412009734 1.1514087081740199 1.029964639298318 1.015126540110144 1.3017841734193116 1.2656310422819048 0.8753352169732176 1.0 15.912646791727148 -5.293134676386745 24.902415622610352 1.1054274013373062 0.9310818717600177 0.13742607027006715 0.1674324174732913 1057.4383894095672 830807.8298541897 0.04786171589379968 0.0709978171086026 5.091729500852122e-06 5.293134676386745 -0.17434552957728855 GEGS(ph)PSEATR ddPTM_KYSE-520_SHP099_60min_R1 2 GEGSPSEATR 10 0 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 GEGS(0.991)PS(0.009)EATR;GEGS(0.967)PS(0.033)EATR 166.69 2.078e-05 582770000.0 1063370.0 937060.0 863280.0 833070.0 913840.0 900250.0 891270.0 952330.0 1118350.0 886630.0 True False 1004382.7463244597 892042.2310442654 918928.4100968377 912244.7223283721 985754.0089616542 894631.2058192188 981368.2695569622 949026.5895054927 915285.8313092835 878775.1479877012 1.1429348549789853 1.0150972442574695 1.04569230502374 1.038086619105368 1.121736329502402 1.018043361681115 1.116745588224915 1.0799424536283935 1.0415472415272413 1.0 19.745134544946893 -8.038597783713417 4.049733901150639 1.0000801438620508 1.069490687140554 0.22202314910838117 0.041996158002785416 0.33750741427411407 16.17914228378979 0.03871229644119901 0.010167141183091644 9.149602279239328e-09 8.038597783713417 0.06941054327850327 GEHGFIGCR ddPTM_KYSE-520_SHP099_60min_R1 4 GEHGFIGCR 9 0 Q16658;C9JPH9;C9JFC0;A0A0A0MSB2 Q16658 FSCN1 Fascin 0 ;;; 178.94 5.4611e-05 5187570000.0 1233070.0 1143810.0 854540.0 587976.0 1162350.0 1042000.0 770380.0 891310.0 728440.0 921150.0 False True 1164669.1490358964 1088859.6507061878 909625.0157123435 643857.0622585699 1253820.3321331746 1035496.4914897262 848257.5285842593 888218.2536433188 596173.6584780563 912989.3276438559 1.2756656773212767 1.1926313021820298 0.9963150588625229 0.7052186074509398 1.3733132405489323 1.1341824708532176 0.929099062716703 0.9728681669648169 0.652990829604325 1.0 19.80023847041271 -7.025364100791278 2.299024351245244 0.8546016950652934 1.1027649335522083 0.24842147927992442 0.18957154843332605 0.48336054688069574 5.043552458985056 0.11115161410436417 0.05899478419109183 9.432697327686273e-08 7.025364100791278 0.2481632384869149 GEIKDSS(ph)PSSSPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 GEIKDSSPSSSPSPK 15 1 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 2 GEIKDS(0.172)S(0.828)PS(0.04)S(0.065)S(0.124)PS(0.772)PK 135.98 9.4769e-06 672180000.0 703730.0 782280.0 583950.0 642440.0 737250.0 621980.0 618100.0 599160.0 860390.0 519970.0 True False 664692.6940490251 744698.0945737804 621592.3513530358 703497.3044433704 795267.3806213129 618097.992108234 680583.5800746776 597081.6538049951 704164.8646668687 515363.4703305388 1.2897551578941187 1.4449958862939067 1.2061241961025388 1.365050774732187 1.5431194223200415 1.199343817891874 1.3205894853940103 1.1585641749541244 1.3663460939814736 1.0 18.975230755055573 -9.87087378752448 0.30364901639439296 0.8373717754828884 1.3644866665888997 0.4456651798282195 0.10970631255952219 11.650818729903488 0.961059506228768 1.8138233357291813 0.12044207778750039 1.346251538054416e-10 9.87087378752448 0.5271148911060113 GEIPS(ph)PQLTRPK ddPTM_KYSE-520_SHP099_60min_R1 2 GEIPSPQLTRPK 12 1 Q8IWZ3-6;H7C0V5 Q8IWZ3-6 ANKHD1;ANKHD1-EIF4EBP3 Ankyrin repeat and KH domain-containing protein 1 1 GEIPS(0.965)PQLT(0.035)RPK;GEIPS(0.994)PQLT(0.006)RPK 107.37 0.00073857 1908710000.0 1378150.0 1193490.0 1079030.0 895530.0 968620.0 1094040.0 939840.0 993780.0 1162320.0 1003130.0 True False 1301701.272226087 1136152.9489349863 1148586.0003090412 980640.901949087 1044844.8833060906 1087211.6905464677 1034848.1991544811 990332.8091299946 951271.9877027808 994243.0486233309 1.3092384945798468 1.1427315991880955 1.1552366414826032 0.9863190930094227 1.0508948337660746 1.093506956927549 1.0408402659564717 0.996067119102567 0.9567801243568667 1.0 19.923239044716777 -1.000000000000543 0.46713243905253043 1.005070852112287 8.688689638310429 0.824920390903156 0.04218536076138926 38.86315215355719 0.45082159212806944 0.02633817886899107 287.75736346421945 0.099999999999875 1.000000000000543 7.683618786198141 GEKEEEDKDDEEKPK ddPTM_KYSE-520_SHP099_60min_R1 5 GEKEEEDKDDEEKPK 15 3 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ;;;; 179.46 4.603999999999999e-09 9309150000.0 10874410.0 9760900.0 6443120.0 7841850.0 10201530.0 10985170.0 10143210.0 11681840.0 8593140.0 8547260.0 False True 10271184.799701095 9291971.712590393 6858453.8245565 8587137.066261819 11004332.3722343 10916607.47928809 11168584.654989924 11641318.42360196 7032842.39143117 8471537.926067652 1.2124344941071177 1.096845908462287 0.8095878085432925 1.013645590824596 1.2989769352708698 1.2886216852900756 1.3183656559717718 1.3741682472766392 0.8301730397488404 1.0 23.014192470038882 -5.7470570317360234 24.75478056636681 1.2156036090313145 1.0217124364107621 0.1298722312449765 0.18168904037884498 349.99301119744786 602402.1573060008 0.05412110826146591 0.06953778358831822 1.790370726352057e-06 5.7470570317360234 -0.19389117262055233 GEKS(ph)DEDKDKEGEALEVK ddPTM_KYSE-520_SHP099_60min_R1 1 GEKSDEDKDKEGEALEVK 18 3 O94826 O94826 TOMM70A Mitochondrial import receptor subunit TOM70 1 GEKS(1)DEDKDKEGEALEVK 84.375 0.0029222 977790000.0 564720.0 616090.0 627280.0 705580.0 652920.0 647350.0 612510.0 712500.0 924090.0 576700.0 True False 533393.855858589 586492.111630057 667715.4724834862 772638.1110596367 704301.0893933767 643309.64852771 674428.4883215349 710028.5037987493 756298.5504131936 571590.8866658101 0.9331741780733576 1.0260697385347908 1.168170256139645 1.3517327324208583 1.2321769045368944 1.1254721926730638 1.1799146978280122 1.2421970335119759 1.3231466212220697 1.0 19.124623389004107 -4.698746556725553 2.816339390278385 1.216958744943182 0.9492311762305539 0.4870132291163187 0.09392043776992748 0.21040871048519566 3.2518130268576515 0.02481106738411226 0.0832666586035629 2.0010292790368485e-05 4.698746556725553 -0.26772756871262815 GELDLS(ph)LENLDLSK ddPTM_KYSE-520_SHP099_60min_R1 2 GELDLSLENLDLSK 14 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 GELDLS(1)LENLDLSK;GELDLS(1)LENLDLSK 258.92 1.3140000000000001e-24 331110000.0 520390.0 543280.0 395940.0 412470.0 444290.0 553730.0 453700.0 542690.0 548820.0 578640.0 True False 491522.9293282534 517180.01332009514 421462.9259263991 451671.02478637267 479253.0953356975 550273.965674286 499564.42368529626 540807.5350547977 449168.12262633396 573513.6997751078 0.857037817093113 0.9017744711641539 0.7348785671408854 0.7875505414491174 0.8356436742899556 0.9594783278761523 0.8710592682985441 0.9429723043527378 0.7831863873565121 1.0 19.129468423383308 -6.091222809937781 7.089994749019868 0.9049923354552235 0.8189997576778807 0.29662090080194425 0.0676750320686132 0.363367882974679 24.438062523459106 0.022182988180007482 0.022249872273581443 8.105451100401912e-07 6.091222809937781 -0.08599257777734282 GEPAAAAAPEAGAS(ph)PVEK ddPTM_KYSE-520_SHP099_60min_R1 3 GEPAAAAAPEAGASPVEK 18 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 GEPAAAAAPEAGAS(1)PVEK;GEPAAAAAPEAGAS(1)PVEK;GEPAAAAAPEAGAS(1)PVEK 246.67 5.2868999999999995e-28 5140900000.0 4698750.0 5656800.0 3875880.0 3866380.0 4090700.0 6372000.0 4890230.0 6821500.0 6663400.0 7496000.0 True False 4438100.970774094 5385038.836970089 4125725.426427269 4233839.592730464 4412614.817100855 6332229.984426617 5384582.172445545 6797837.808650072 5453494.530644493 7429591.271799751 0.5973546603592642 0.7248095675747197 0.5553098784972392 0.5698617108051026 0.593924302922244 0.8522985656642579 0.7247481019425149 0.9149679383376574 0.7340234921595403 1.0 22.824851414493537 -6.26078313577719 24.993599195416337 0.8323644021127371 0.6096534111814363 0.6511027656913804 0.08647012168758277 38.74536565336484 1475669.1651288616 0.028173773763782377 0.026598823302593777 5.485508144732926e-07 6.26078313577719 -0.22271099093130076 GEPNVS(ph)YICSR ddPTM_KYSE-520_SHP099_60min_R1 5 GEPNVSYICSR 11 0 A0A3B3ITW1;P49841;P49841-2;A8MT37;P49840 A0A3B3ITW1 GSK3B;GSK3A Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha 1 GEPNVS(0.653)Y(0.347)ICSR;GEPNVS(0.841)Y(0.159)ICSR;GEPNVS(0.919)Y(0.081)ICSR;GEPNVS(0.969)Y(0.03)ICSR;GEPNVS(0.874)Y(0.126)ICSR 159.58 2.215e-05 33944390000.0 2360150.0 2456240.0 2286960.0 1750780.0 2025560.0 2155600.0 1910800.0 2110960.0 2485930.0 2131260.0 True False 2229227.774657618 2338238.5435085976 2434381.1008653753 1917173.6048088006 2184960.048140123 2142146.1008207775 2103962.311610896 2103637.5724617667 2034547.7771955864 2112378.694495187 1.0553163504569218 1.1069220446134949 1.1524359278993483 0.9075899173784101 1.0343600102737645 1.0140918891121007 0.9960156846373125 0.9958619531354868 0.9631548464759532 1.0 21.01043706486096 -5.250257230909901 24.99563803349412 0.9905646834590823 1.1050945021171203 0.6591672853066994 0.038699992934889904 446.2591955109396 997528.7205546119 0.010397989963782934 0.017802651148680286 5.620083512591609e-06 5.250257230909901 0.11452981865803802 GEPNVSY(ph)ICSR ddPTM_KYSE-520_SHP099_60min_R1 3 GEPNVSYICSR 11 0 A0A3B3ITW1;P49841;P49841-2;A8MT37;P49840 A0A3B3ITW1 GSK3B;GSK3A Glycogen synthase kinase-3 beta;Glycogen synthase kinase-3 alpha 1 GEPNVS(0.038)Y(0.962)ICSR;GEPNVS(0.341)Y(0.659)ICSR;GEPNVS(0.419)Y(0.581)ICSR 213.35 1.9933e-11 33312500000.0 4538480.0 4237090.0 4130230.0 3576660.0 3848880.0 4340180.0 3490060.0 4086490.0 4803980.0 4128370.0 True False 4286721.467164419 4033533.83639825 4396471.234401651 3916584.691037963 4151764.958868439 4313091.326711977 3842869.324503205 4072314.919983936 3931698.3304807693 4091795.853623256 1.047638157062151 0.985761260016573 1.0744600639126722 0.9571798865698188 1.0146559377325925 1.0540827257774275 0.93916447984578 0.9952390260080864 0.9608735311169736 1.0 21.96430273779151 -6.761533285710191 24.9999999999991 0.9734225154362828 1.0196995996864855 0.3083163224117952 0.03544129579323241 3.28000204288993 872629.4681660344 0.013573373206457613 0.009815793419737777 1.7316763044850277e-07 6.761533285710191 0.046277084250202716 GEQVSQNGLPAEQGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 GEQVSQNGLPAEQGSPR 17 0 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR;GEQVSQNGLPAEQGS(1)PR 348.4 3.473699999999999e-59 21532010000.0 11955520.0 10651300.0 9799430.0 8694700.0 9865810.0 10638810.0 10197170.0 10674680.0 11915740.0 10682090.0 True False 11292323.472861744 10139595.560072767 10431116.937442359 9521041.673843114 10642193.11821981 10572409.240523797 11227999.458388764 10637652.026569035 9752141.987361094 10587454.993140267 1.066575818284769 0.9576990472821207 0.9852336509766321 0.8992757636289274 1.0051700928235359 0.9985789075253478 1.0605003247393745 1.0047411803366617 0.9211035129480709 1.0 23.335852500941492 GES(ph)AEDKEHEEGRDS(ph)EEGPR ddPTM_KYSE-520_SHP099_60min_R1 1 GESAEDKEHEEGRDSEEGPR 20 2 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7EPS6;A0A087WX58 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 2 GES(1)AEDKEHEEGRDS(1)EEGPR 63.901 0.011653 24945000.0 17873.0 14780.0 11149.0 16258.0 13834.0 13026.0 16028.0 18534.0 11748.0 15167.0 True False 16881.549061057813 14069.946614767701 11867.682379030712 17803.155431854073 14922.657095307193 12944.699902250637 17648.26665820569 18469.70987986811 9614.859342979791 15032.63217974744 1.12299355556649 0.9359602793796348 0.7894613689157729 1.184300608102365 0.992684242977194 0.8611066742982145 1.1739971049103524 1.2286411094892111 0.6395991884863192 1.0 13.875810023546777 -5.259082262159605 24.983515365114016 1.0207256576522845 0.9481206123922596 0.02271584716460673 0.17925691188569978 923.9220847157625 9792783.0910045 0.048970197807001604 0.07992385072500353 5.507033747031443e-06 5.259082262159605 -0.07260504526002487 GES(ph)ENAGTNQETR ddPTM_KYSE-520_SHP099_60min_R1 8 GESENAGTNQETR 13 0 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 GES(1)ENAGTNQETR;GES(0.999)ENAGT(0.001)NQETR;GES(1)ENAGTNQETR;GES(1)ENAGTNQETR;GES(1)ENAGTNQETR;GES(1)ENAGTNQETR;GES(1)ENAGTNQETR;GES(1)ENAGTNQETR 234.29 1.0081e-15 3099792000.0 1360752.0 1164247.0 1141875.0 1056081.0 1133037.0 1228084.0 1218961.0 1305615.0 1434209.0 1147359.0 True False 1285268.3739681405 1108314.8265496255 1215482.0895645972 1156450.6207176698 1222200.5658013287 1220419.0722213716 1342185.47379293 1301086.126297833 1173792.799066709 1137194.2918917935 1.1302100117210547 0.9746046339239663 1.0688429393560948 1.016933191595468 1.0747508798765795 1.0731843106520773 1.1802604738369913 1.1441194662816987 1.0321831611676766 1.0 20.117047331911564 -6.18383520418527 2.625214572426164 1.1020246403600524 1.0446594615468325 0.048611168392358683 0.06134463228241437 0.5530811519125907 7.472191022208174 0.02190813435705959 0.021354289412042343 6.548846270798439e-07 6.18383520418527 -0.0573651788132199 GES(ph)LDNLDSPR ddPTM_KYSE-520_SHP099_60min_R1 1 GESLDNLDSPR 11 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 GES(1)LDNLDSPR 115.83 0.0014977999999999999 259260000.0 1021200.0 1029100.0 962560.0 860360.0 895080.0 972850.0 921310.0 987240.0 1220200.0 987830.0 True False 964552.0002882694 979660.4912894071 1024608.1577504546 942128.3557233331 965517.703691454 966778.0822896148 1014445.0059191096 983815.4948635473 998642.4387388444 979078.5947201102 0.985162994564299 1.0005943308049374 1.046502459839151 0.9622601911674515 0.9861493335654705 0.9874366445177859 1.0361221370681786 1.0048381204215697 1.0199818933068667 1.0 19.901065150059193 -6.736350080763328 24.971535877354313 1.0156387364200432 0.995446552624575 0.174051419231812 0.021887316344922556 426.65550141754807 424653.34198889206 0.008612813621800245 0.006667936658686946 1.8350585232980474e-07 6.736350080763328 -0.020192183795468166 GESAEDKEHEEGRDS(ph)EEGPR ddPTM_KYSE-520_SHP099_60min_R1 17 GESAEDKEHEEGRDSEEGPR 20 2 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7EPS6;A0A087WX58 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR;GESAEDKEHEEGRDS(1)EEGPR 271.11 9.837699999999998e-36 48219629000.0 8400530.0 7135013.0 6644584.0 8274026.0 7348045.0 6975347.0 7659745.0 8088701.0 8273723.0 6683252.0 True False 7934535.85485862 6792236.265607147 7072904.516350291 9060386.943363365 7926294.33684303 6931811.271999413 8434066.776507216 8060643.1841480015 6771423.466783866 6624043.586771378 1.197838714513349 1.0253912397514502 1.06776237560926 1.3678030382314383 1.1965945321785512 1.0464622071392564 1.2732504951130703 1.2168765314657048 1.0222492316184053 1.0 22.659280735248977 -9.927462581446862 6.990901522026065 0.9999999949200142 1.1599066328338294 0.15529408970646585 0.10977354579713078 8.944291287747059e-09 1.3856053857546809e-09 0.1083431299478727 0.026277067957182456 1.1817821298008368e-10 9.927462581446862 0.1599066379138152 GESAEDKEHEEGRDSEEGPR ddPTM_KYSE-520_SHP099_60min_R1 1 GESAEDKEHEEGRDSEEGPR 20 2 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7EPS6;A0A087WX58 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 0 98.132 0.0014416 29150000.0 12176.0 17376.0 11265.0 10247.0 13378.0 13110.0 10205.0 11987.0 10147.0 9787.6 False True 11500.573007745767 16541.23087809227 11991.159924637277 11220.87179912711 14430.772489592278 13028.17562709242 11236.620991202215 11945.419894786837 8304.56058505413 9700.889478637577 1.185517372718377 1.7051251758426764 1.236088706199893 1.156684840481556 1.487572095463042 1.34298773898846 1.158308319659397 1.231373671568155 0.856061766639202 1.0 13.243901319341946 -7.3573433804487385 1.2699634176757146 0.94173687732571 1.3596307083452863 0.46477690434268404 0.16517714279697693 0.415063233556485 1.1734170361646674 0.14292897567343693 0.05212372360251246 4.391942236292759e-08 7.3573433804487385 0.41789383101957633 GESRPET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 GESRPETPK 9 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GES(0.005)RPET(0.995)PK 75.479 0.045419 1854200000.0 947350.0 868740.0 692580.0 674460.0 677220.0 739540.0 699240.0 671430.0 805540.0 672240.0 True False 894798.6070045962 827004.4263946753 737224.8149671812 738560.4756162063 730513.36114529 734924.2565415665 769926.0031247654 669100.9660429409 659274.2420108899 666284.4765948061 1.342967813954877 1.2412182115081893 1.1064715461103511 1.1084761863142643 1.0963985907021874 1.103018729023313 1.155551465133395 1.0042271575386674 0.9894786163715783 1.0 19.34577875585529 -1.0000000000000002 0.3672570315919236 1.030831418344541 5.1347828129574795 0.8158826199307697 0.04528879528368112 29.447015502232347 0.4086722023431799 0.03963724522881053 85.03086096383376 0.09999999999999995 1.0000000000000002 4.103951394612938 GESSSPS(ph)PSAEK ddPTM_KYSE-520_SHP099_60min_R1 1 GESSSPSPSAEK 12 0 P28290-3;P28290;E9PHV5;P28290-2 P28290-3 SSFA2 Sperm-specific antigen 2 1 GES(0.002)S(0.01)S(0.347)PS(0.603)PS(0.038)AEK 99.161 0.036071 0.0 517380.0 543740.0 465200.0 437520.0 434690.0 643530.0 533490.0 662860.0 716660.0 684020.0 True False 488679.9000285405 517617.9142296207 495187.53634631727 479101.7692548157 468897.6299522257 639513.4905646667 587420.375560653 660560.6933726877 586532.6095284221 677960.1149595077 0.7208092176008433 0.763493165465252 0.7304080659315676 0.7066813499543861 0.6916301115740878 0.943290728250087 0.8664527051060189 0.9743356265318658 0.8651432386453203 1.0 19.37084087516906 -6.263840266217598 24.988970479043793 0.9242784586910369 0.7244249027317423 0.8534533787539679 0.042903693034433345 76.95131551063344 800922.2619204662 0.014059730528287174 0.012988514573581586 5.447029580930476e-07 6.263840266217598 -0.19985355595929455 GESVASTASS(ph)VPCS(ph)PQEPDLAPLDLSLGGAGIPGPR ddPTM_KYSE-520_SHP099_60min_R1 3 GESVASTASSVPCSPQEPDLAPLDLSLGGAGIPGPR 36 0 Q6ZUT6-4;Q6ZUT6;Q6ZUT6-2 Q6ZUT6-4 C15orf52 Uncharacterized protein C15orf52 2 GES(0.015)VAS(0.047)T(0.125)AS(0.416)S(0.447)VPCS(0.949)PQEPDLAPLDLS(0.001)LGGAGIPGPR;GESVASTAS(0.035)S(0.965)VPCS(1)PQEPDLAPLDLSLGGAGIPGPR;GESVAST(0.002)AS(0.123)S(0.874)VPCS(1)PQEPDLAPLDLSLGGAGIPGPR 152.51 2.8784e-07 269995000.0 417243.0 402388.0 426308.0 415431.0 430450.0 438740.0 402292.0 458030.0 529250.0 492250.0 True False 394097.69903670053 383056.6764832982 453788.4957969169 454913.437336116 464323.9660745248 436001.66091766075 442959.60135156463 456441.2008350055 433151.54130678053 487889.04796470463 0.8077609052319017 0.7851307137991129 0.9301059281612432 0.932411660466348 0.951699916223812 0.8936492072050005 0.9079105243280838 0.9355430353255764 0.887807469984684 1.0 18.896193572735903 -4.763470604037627 24.999995578307097 0.9263784956859714 0.7964457773524455 0.7522422599953174 0.030580459403950763 22.01301052648963 270948.4344797937 0.0075206844475986835 0.017019799072108335 1.7239687768434817e-05 4.763470604037627 -0.12993271833352593 GETEERKDS(ph)DDEKSDR ddPTM_KYSE-520_SHP099_60min_R1 2 GETEERKDSDDEKSDR 16 3 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 GETEERKDS(0.996)DDEKS(0.004)DR;GETEERKDS(1)DDEKSDR 183.54 6.6486e-12 1791020000.0 2031550.0 2705200.0 2771700.0 1262090.0 1716010.0 1568120.0 1018310.0 939350.0 3289500.0 1132160.0 True False 1918855.871705479 2575238.1314120153 2950368.2168767997 1382038.6541388056 1851050.224238696 1558332.781415422 1121250.7125478801 936091.6140959384 2692209.7215468176 1122129.9432071506 1.7100121811393896 2.294955363236942 2.629257186065614 1.2316208675341218 1.6495863384130223 1.388727563014283 0.9992164627059523 0.8342096383423317 2.3991960448468514 1.0 20.097808319750083 -5.2736531159087 24.808948876615556 1.349142081120525 2.2197629596572286 0.41573413822848126 0.46378307447846534 624.8706260580044 1269256.8609227734 0.1290821305217765 0.19307084631913743 5.325334399496578e-06 5.2736531159087 0.8706208785367036 GEVDS(ph)NGSDGGEASR ddPTM_KYSE-520_SHP099_60min_R1 1 GEVDSNGSDGGEASR 15 0 Q7LBC6 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 GEVDS(0.676)NGS(0.324)DGGEASR 90.70700000000001 0.0022493 6018100.0 20176.0 18565.0 15344.0 14954.0 15161.0 17287.0 16487.0 18144.0 16243.0 17801.0 True False 19056.79706014114 17673.10953336689 16333.098791268038 16375.223663915955 16354.084445710012 17179.105420712942 18153.666857613996 18081.062698841426 13293.680652708605 17643.29698896844 1.0801154156196826 1.0016897377183578 0.9257396053288901 0.9281271904086094 0.9269290459677398 0.9736902026562418 1.0289271256367032 1.0248120127517382 0.7534691878179314 1.0 14.106832560919974 -4.416776592568665 2.880584983529976 0.9490339014535375 1.0843149010403268 0.23938187579025838 0.07433828334435681 0.4689988984852823 6.383117883195028 0.019106371161875173 0.12186885869363023 3.830217246227751e-05 4.416776592568665 0.1352809995867893 GEVDSNGS(ph)DGGEASR ddPTM_KYSE-520_SHP099_60min_R1 4 GEVDSNGSDGGEASR 15 0 Q7LBC6 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 GEVDS(0.324)NGS(0.676)DGGEASR;GEVDS(0.031)NGS(0.969)DGGEASR;GEVDS(0.011)NGS(0.989)DGGEASR;GEVDS(0.11)NGS(0.89)DGGEASR 164.97 4.4543e-08 411570000.0 940730.0 831270.0 787870.0 789700.0 839370.0 818130.0 863970.0 843780.0 953600.0 839620.0 True False 888545.8316012387 791334.5414382924 838657.360836571 864752.8505680378 905423.643637993 813023.7472000852 951308.5191346367 840853.1241197325 780450.2782997553 832181.6200144758 1.0677306614700075 0.9509156684144587 1.0077816436536804 1.0391395697407924 1.0880120659505113 0.9769787359470192 1.14315012042454 1.010420206234675 0.9378364764727433 1.0 19.666538899076638 -3.9023071763187533 19.27970247581921 1.0219656333396556 4.567504129493432 0.057519695782766944 0.05857419248487411 1150.5241154550113 230811.60735012928 0.014153973502015211 2955.99360871541 0.00012522551420562908 3.9023071763187533 3.545538496153777 GEVIS(ph)SGSKPLSPGPCLDIPSILSNK ddPTM_KYSE-520_SHP099_60min_R1 1 GEVISSGSKPLSPGPCLDIPSILSNK 26 1 H0Y966;Q8TEP8;C9JT09;K7EPA2;A0A0A0MR42;K7ENP4;Q8TEP8-2;Q8TEP8-1 H0Y966 CEP192 Centrosomal protein of 192 kDa 1 GEVIS(0.523)S(0.464)GS(0.013)KPLSPGPCLDIPSILSNK 108.04 0.00055684 88191000.0 61215.0 78252.0 55514.0 46248.0 58968.0 67577.0 60539.0 69648.0 74929.0 75989.0 True False 57819.281920922855 74492.65646135331 59092.52126554052 50643.39601503179 63608.4461179756 67155.22687658462 66658.87292370305 69406.40734396547 61323.78240637831 75315.79657854738 0.7676913017924827 0.989070817085024 0.7845966443960067 0.6724139996609533 0.8445565075002281 0.8916486305306213 0.8850583270958841 0.921538515118552 0.8142220515774975 1.0 16.200664864040807 -6.1459798456032475 4.331485713433994 0.8963333425792543 0.809802249258676 0.22775534251408924 0.08489149664762417 0.42521915090665374 13.184199438379089 0.02967233679094937 0.029737969786631457 7.145294846284692e-07 6.1459798456032475 -0.08653109332057829 GEVISSGSKPLS(ph)PGPCLDIPSILSNK ddPTM_KYSE-520_SHP099_60min_R1 2 GEVISSGSKPLSPGPCLDIPSILSNK 26 1 H0Y966;Q8TEP8;C9JT09;K7EPA2;A0A0A0MR42;K7ENP4;Q8TEP8-2;Q8TEP8-1 H0Y966 CEP192 Centrosomal protein of 192 kDa 1 GEVISSGSKPLS(1)PGPCLDIPSILSNK;GEVISSGSKPLS(1)PGPCLDIPSILSNK 201.08 7.2459e-16 990250000.0 708400.0 886410.0 676580.0 607550.0 643110.0 917300.0 683240.0 864830.0 971780.0 873490.0 True False 669103.6398396101 843825.5330714653 720193.4293662758 665291.3693334325 693719.0982046409 911574.7904448415 752308.5669798142 861830.1065828396 795329.24858026 865751.5581649359 0.7728587185656995 0.9746739986931754 0.8318707862251059 0.7684552953547057 0.8012911922157687 1.0529288475980725 0.8689658827463416 0.9954704654642398 0.9186575999540278 1.0 19.72359355339966 -6.243839541644125 24.944223206431776 0.9607815512800508 0.8345805539354281 0.48199664311458956 0.07096542676571338 780.734726113228 1106534.8995199953 0.0233856149479751 0.023334235742886948 5.7037496923529e-07 6.243839541644125 -0.12620099734462276 GEVLGLSSS(ph)LGK ddPTM_KYSE-520_SHP099_60min_R1 7 GEVLGLSSSLGK 12 0 F1LLU8;Q9NQG7-2;Q9NQG7-3;Q9NQG7;Q9NQG7-4 F1LLU8 HPS4 Hermansky-Pudlak syndrome 4 protein 1 GEVLGLS(0.004)S(0.1)S(0.896)LGK;GEVLGLSSS(1)LGK;GEVLGLSS(0.005)S(0.995)LGK;GEVLGLS(0.003)S(0.049)S(0.948)LGK;GEVLGLS(0.006)S(0.032)S(0.962)LGK;GEVLGLS(0.001)S(0.003)S(0.996)LGK;GEVLGLS(0.001)S(0.062)S(0.937)LGK 289.31 1.2505e-29 3479349000.0 9696050.0 11233760.0 9267020.0 8196710.0 9147700.0 11675070.0 8989040.0 11139300.0 12724900.0 11778180.0 True False 9158190.777903529 10694073.307382466 9864386.93695624 8975722.85396927 9867571.946706792 11602201.557482688 9897739.887776224 11100660.368232163 10414378.928624745 11673834.488485366 0.7845057925857032 0.9160720342515307 0.8449997253846714 0.7688752879632299 0.8452725585958749 0.993863804470302 0.8478567944011014 0.9509009553957133 0.892112950453178 1.0 23.476775183172723 -6.112398192890976 7.734670623900184 0.9280673307946172 0.8325323179897084 0.46640326021857526 0.05590617505432321 0.28112795931528517 17.443098937492174 0.018001891686858302 0.018028423103442225 7.719724597981888e-07 6.112398192890976 -0.09553501280490884 GEVPPKET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 GEVPPKETPK 10 1 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GEVPPKET(1)PK;GEVPPKET(1)PK;GEVPPKET(1)PK;GEVPPKET(1)PK 118.76 0.0017519000000000002 4150070000.0 7516880.0 8186890.0 5971870.0 5029700.0 5627970.0 7028170.0 5491110.0 6811660.0 8471710.0 7986860.0 True False 7099903.681871221 7793579.515627573 6356826.295529846 5507721.175765557 6070859.220231022 6984304.584062704 6046204.986869219 6788031.941313395 6933461.0184299685 7916102.634083055 0.8968938390594305 0.9845222928353715 0.8030247445454168 0.6957617189110046 0.76690001391502 0.882290807346476 0.7637855730719146 0.8574967070395586 0.8758680046134965 1.0 22.91635888670237 -8.183297974737767 1.7163308365049628 0.9995522473199482 0.8273421773310139 0.30754829845565856 0.0766413514967384 0.9413443708323508 5.240376602482507 0.08103092226793364 0.023068141800962554 6.556952314426179e-09 8.183297974737767 -0.1722100699889343 GEVPPKET(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 1 GEVPPKETPKK 11 2 P49006 P49006 MARCKSL1 MARCKS-related protein 1 GEVPPKET(1)PKK 58.071000000000005 0.037401 955010000.0 986210.0 888330.0 851000.0 751120.0 799840.0 946720.0 856800.0 1012300.0 1174300.0 1042100.0 True False 931502.9653391059 845653.2933894856 905856.8216481428 822506.2189675369 862782.8575329271 940811.1693120474 943413.7055621804 1008788.5675725968 961076.7216940057 1032867.804741532 0.9018607812760783 0.8187430080668499 0.8770307463255931 0.7963325172802375 0.8353274771197197 0.9108727806144359 0.9133924992446281 0.9766870096459626 0.930493444835865 1.0 19.97822418688811 -6.702083131186246 1.5160864157891312 0.9649244241285813 0.843788841595975 0.7044911494964217 0.033955843786813135 0.2166475733021831 1.0162167847991546 0.018477446659161772 0.011643217763919496 1.9857147821442697e-07 6.702083131186246 -0.12113558253260626 GEVQVS(ph)DKER ddPTM_KYSE-520_SHP099_60min_R1 1 GEVQVSDKER 10 1 A0A087X020;Q9Y3A5 A0A087X020 SBDS Ribosome maturation protein SBDS 1 GEVQVS(1)DKER 103.21 0.0010839 168840000.0 142190.0 125610.0 125330.0 129930.0 124380.0 125560.0 110770.0 121570.0 139010.0 128620.0 True False 134302.43725126216 119575.50705554613 133408.9723350901 142278.50813512097 134167.99837460663 124776.33346588282 121967.71261102092 121148.30204465124 113769.28815693047 127480.52686484574 1.0535133526208986 0.9379903738734898 1.0465047142182717 1.116080327201377 1.0524587689918392 0.9787874001977581 0.956755636414419 0.9503279051638381 0.892444445868569 1.0 16.959917361198393 -6.467619017069897 3.071504368492385 0.94636017876343 1.039698170621811 0.454817972372486 0.04752611348817195 0.2623694002051554 4.911592346900179 0.02003838502414271 0.01650973655546508 3.407069423134611e-07 6.467619017069897 0.09333799185838088 GEWIKPGAIVIDCGINYVPDDKKPNGR ddPTM_KYSE-520_SHP099_60min_R1 1 GEWIKPGAIVIDCGINYVPDDKKPNGR 27 3 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 0 175.48 9.5207e-11 816030000.0 308920.0 312340.0 243950.0 210320.0 301780.0 259690.0 177890.0 188660.0 238950.0 168510.0 False True 291783.5917832473 297334.71756810177 259675.40733380098 230308.74956498644 325528.36910667986 258069.17838288558 195872.85723909445 188005.58249357506 195562.70343931057 167017.1324987964 1.7470279091598584 1.7802647735569554 1.5547830539820358 1.3789528422579411 1.9490717163942795 1.5451659031731093 1.1727710463506251 1.1256664491885582 1.170914028479802 1.0 17.349636575359394 -6.723647298244337 3.6036645327850083 1.118247011740145 1.6702458104904319 0.7719131201882897 0.1459038455463396 0.11516865697408742 3.109574286484777 0.06313118382530382 0.045200097824059295 1.8895252583695943e-07 6.723647298244337 0.5519987987502868 GFAFVTFDDHDTVDK ddPTM_KYSE-520_SHP099_60min_R1 2 GFAFVTFDDHDTVDK 15 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 261.67 9.2629e-25 1640880000.0 1259140.0 1513800.0 873180.0 2106600.0 1452300.0 1340390.0 1075000.0 1074280.0 975240.0 969140.0 False True 1189292.9941666406 1441074.7757398752 929466.5799373979 2306810.630627616 1566587.7475433461 1332024.1288175758 1183671.4909889626 1070553.5734188375 798160.9997997619 960554.173579511 1.238132139632201 1.5002535154989762 0.9676357726641642 2.401541416483853 1.630920764942853 1.3867246277779208 1.232279785509654 1.11451660183768 0.8309380373887816 1.0 19.873507456105372 -6.999692872343115 1.6132240075881978 0.9502487287213374 1.5504617912822978 0.3361536521061115 0.3480355310696231 0.48797626691914187 2.4722057935130834 0.23896522846493606 0.11667883188068928 1.0007074376804722e-07 6.999692872343115 0.6002130625609604 GFAFVTFES(ph)PADAK ddPTM_KYSE-520_SHP099_60min_R1 2 GFAFVTFESPADAK 14 0 P38159;H3BT71;H0Y6E7;H3BR27;P38159-3;O75526;Q8N7X1;Q96E39;A0A1B0GUK8 P38159;Q96E39 RBMX;RBMXL2;RBMXL3;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA-binding motif protein, X-linked-like-2;RNA-binding motif protein, X-linked-like-3;RNA binding motif protein, X-linked-like-1 1 GFAFVT(0.003)FES(0.997)PADAK;GFAFVTFES(1)PADAK 105.19 0.00071033 520740000.0 1148240.0 1192750.0 1079720.0 1070360.0 1035330.0 1201010.0 982220.0 1042050.0 1436370.0 1106740.0 True False 1084544.8382403087 1135448.4996457507 1149320.478813082 1172086.69258453 1116804.5807781117 1193514.0510979611 1081512.3831434231 1038435.3717662989 1175561.4159410878 1096935.1446306896 0.988704613530682 1.0351099654374074 1.0477560906301613 1.0685104751376546 1.0181135924440743 1.08804431778853 0.9859401336872482 0.9466697979814603 1.0716781404035236 1.0 20.065046799453935 -10.149672936744658 5.958307167353433 0.9999997623512572 1.0276978163008461 0.038061745719242146 0.04197676454234999 1.3521061944948436e-07 1.9288761843416763e-08 0.041465839263839205 0.010056857074022547 7.084791327707301e-11 10.149672936744658 0.027698053949588908 GFCFLEYEDHK ddPTM_KYSE-520_SHP099_60min_R1 8 GFCFLEYEDHK 11 0 B4DT28;O43390-4;O43390-3;O43390;O43390-2;O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 B4DT28;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 0 ;;;;;;; 234.72 7.0851e-14 5653360000.0 5585680.0 5092520.0 3250120.0 2979160.0 5273660.0 4751160.0 4016590.0 3736510.0 3636220.0 4205450.0 False True 5275831.195622977 4847867.695171644 3459627.935575864 3262298.470682887 5688667.038979161 4721506.248086681 4422626.115340804 3723548.918917987 2975974.109646749 4168192.984790593 1.2657358272215486 1.1630621981422478 0.8300066595284271 0.7826649300036626 1.3647801480729558 1.1327465559572418 1.0610415907993265 0.8933245011699129 0.713972246608025 1.0 21.990990644386603 -7.299567630308751 3.8723037768365134 0.8435913910364369 1.080996054689884 0.23686819826669925 0.17831232711011885 0.3575856677264737 11.644076265548955 0.11094120967230958 0.05163042221655968 5.016864480616797e-08 7.299567630308751 0.23740466365344715 GFCYVEFDEVDSLK ddPTM_KYSE-520_SHP099_60min_R1 1 GFCYVEFDEVDSLK 14 0 Q15056-2;Q15056 Q15056-2 EIF4H Eukaryotic translation initiation factor 4H 0 162.38 2.931e-07 67876000.0 101210.0 122490.0 119590.0 110820.0 112670.0 134240.0 113460.0 122890.0 139110.0 110400.0 False True 95595.67954286706 116605.3965387615 127298.96275076551 121352.29948075191 121536.48799539256 133402.15836620034 124929.64406289111 122463.72327274164 113851.13067772536 109421.94188990028 0.8736426889504015 1.0656491241591122 1.163376929271215 1.1090307609679957 1.110714047806626 1.2191536364838855 1.1417238801025356 1.1191879906131068 1.0404780678475045 1.0 16.739542538725157 -4.296654980875729 3.044931478987058 1.121752252905628 0.8440030154211848 0.6002216105323441 0.05795422806043873 0.20959024673490792 3.025143030146313 0.014544464264887499 0.1344824568235291 5.0506237790700535e-05 4.296654980875729 -0.27774923748444325 GFDNPEENS(ph)SEFPVTFK ddPTM_KYSE-520_SHP099_60min_R1 1 GFDNPEENSSEFPVTFK 17 0 Q8IWI9-3;Q8IWI9;H3BU53 Q8IWI9-3 MGA MAX gene-associated protein 1 GFDNPEENS(0.578)S(0.422)EFPVTFK 73.11 0.029286000000000003 0.0 17994.0 21976.0 17223.0 18051.0 19113.0 22513.0 21543.0 21587.0 31655.0 17710.0 True False 16995.8369498503 20920.239973351498 18333.222137774337 19766.561612768954 20617.08436190591 22372.488016226667 23720.776679418825 21512.119735443666 25907.249957611948 17553.1031781715 0.9682525521177249 1.1918257279640028 1.044443364326199 1.1261006906943978 1.174554957754973 1.274560275134052 1.3513722581496161 1.2255451082971744 1.4759356049265073 1.0 14.09943848381154 -5.979380449434645 1.8639774962958853 1.2864780974188001 1.0819018586358191 0.3230430076223252 0.123838643237671 0.3721044280743408 2.6182721121556445 0.04319527961293522 0.048249743030404024 1.0486234140310751e-06 5.979380449434645 -0.20457623878298103 GFDQDMANK ddPTM_KYSE-520_SHP099_60min_R1 2 GFDQDMANK 9 0 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic 0 ; 145.72 0.002558 887760000.0 1158010.0 1356630.0 938540.0 643490.0 1095850.0 1369930.0 968030.0 1116610.0 1101110.0 1258370.0 False True 1093772.8768642962 1291455.4584568543 999039.7901170945 704647.0961276767 1182087.1604664144 1361379.7587202687 1065887.9194623681 1112736.7405287344 901176.18072425 1247221.820797046 0.8769673995643477 1.035465734260118 0.8010121162558326 0.5649733546815008 0.9477762020800704 1.0915297792418908 0.8546097427811237 0.8921722840109004 0.7225468362543136 1.0 20.250286643396418 GFDQTINLILDESHER ddPTM_KYSE-520_SHP099_60min_R1 4 GFDQTINLILDESHER 16 0 F2Z2Y6;C9JIZ0;C9JNV3;O95777 F2Z2Y6 LSM8 U6 snRNA-associated Sm-like protein LSm8 0 ;;; 153.72 7.647e-06 233124000.0 283576.0 204230.0 165404.0 157447.0 243815.0 206375.0 190997.0 173271.0 185902.0 163349.0 False True 267845.47398525913 194418.48424452014 176066.2064957574 172410.71554183317 263001.8533824149 205086.93707408046 210304.84071108734 172669.9633427555 152146.88300805507 161901.85494359912 1.654369396067556 1.2008416105686293 1.0874872715763055 1.0649088338233985 1.6244523787206482 1.2667361788135503 1.298964985820268 1.066510098991192 0.9397476209340385 1.0 17.304759989432455 -7.3671669267975775 2.9564700901134136 0.9735397748090536 1.3032880324604246 0.3777075661476871 0.185533145784645 0.321290282042854 5.312983855788538 0.12859169070603904 0.05283970229273121 4.2937136051312276e-08 7.3671669267975775 0.32974825765137095 GFEEEHKDS(ph)DDDS(ph)S(ph)DDEQEKKPEAPK ddPTM_KYSE-520_SHP099_60min_R1 1 GFEEEHKDSDDDSSDDEQEKKPEAPK 26 3 Q13435;E9PPJ0 Q13435 SF3B2 Splicing factor 3B subunit 2 3 GFEEEHKDS(1)DDDS(1)S(1)DDEQEKKPEAPK 158.62 3.0095e-10 1034000000.0 326790.0 293080.0 333950.0 345590.0 297200.0 322860.0 291170.0 394690.0 368560.0 323120.0 True False 308662.3072602859 278999.99687795126 355476.95133889234 378434.7696945779 320587.94916331524 320844.910981164 320604.3051453548 393320.91251133836 301638.7946415247 320257.4081835557 0.9637944333933282 0.8711742172035635 1.1099726103295964 1.1816581288189212 1.0010321103316058 1.0018344705933284 1.0010831816936465 1.228139935129639 0.941863597636562 1.0 18.28887241776271 -4.761675017015304 24.99999997365965 1.0646607163385906 0.9174843057672558 0.28652826003177256 0.08834833271140241 7.031017294163032 746342.6438362341 0.022661625763804327 0.05250081690446581 1.7311112669149913e-05 4.761675017015304 -0.1471764105713348 GFENVIHDKLPLQES(ph)EEEER ddPTM_KYSE-520_SHP099_60min_R1 9 GFENVIHDKLPLQESEEEER 20 1 P23497;P23497-3;P23497-4;P23497-2;E9PHV6;P23497-7;P23497-6;P23497-5;C9JBL0 P23497 SP100 Nuclear autoantigen Sp-100 1 GFENVIHDKLPLQES(1)EEEER;GFENVIHDKLPLQES(1)EEEER;GFENVIHDKLPLQES(1)EEEER;GFENVIHDKLPLQES(1)EEEER;GFENVIHDKLPLQES(1)EEEER;GFENVIHDKLPLQES(1)EEEER;GFENVIHDKLPLQES(1)EEEER;GFENVIHDKLPLQES(1)EEEER;GFENVIHDKLPLQES(1)EEEER 289.57 4.766199999999999e-44 7520450000.0 5311970.0 4323340.0 3841050.0 3637030.0 3803960.0 3939460.0 6173410.0 3892800.0 4188220.0 3596460.0 True False 5017304.43495033 4115640.2569343634 4088650.2288972964 3982692.2376870555 4103310.010428276 3914872.3688715105 6797478.529475523 3879296.785386352 3427744.8244343554 3564598.1624035365 1.407537177084573 1.1545874371879468 1.1470157483727148 1.1172906611727609 1.1511283526167497 1.0982647104973513 1.906941040695628 1.0882844597469636 0.9616076394212963 1.0 21.76530801996728 -7.510958701723919 24.8651415415109 0.9955177232856527 1.2718502641725373 0.23007120229175748 0.22822134859267007 866.4597913484088 1807450.85997845 0.13999867963984375 0.06127302754789832 3.083481153149172e-08 7.510958701723919 0.27633254088688464 GFENVIHDKLPLQES(ph)EEEEREER ddPTM_KYSE-520_SHP099_60min_R1 17 GFENVIHDKLPLQESEEEEREER 23 2 P23497;P23497-3;P23497-4;P23497-2;E9PHV6;P23497-7;P23497-6;P23497-5;C9JBL0 P23497 SP100 Nuclear autoantigen Sp-100 1 GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER;GFENVIHDKLPLQES(1)EEEEREER 279.58 1.3353e-38 74756200000.0 21663180.0 21778580.0 21212610.0 19914970.0 20612470.0 19429450.0 16521100.0 19091960.0 26316650.0 18740620.0 True False 20461480.220921323 20732304.32648496 22580008.781976026 21807682.761145964 22234554.120088663 19308183.595561467 18191214.018397935 19025734.446856957 21538209.74875969 18574592.686781723 1.1015843289787113 1.1161646812981656 1.2156395116025713 1.174059810025606 1.197041275414426 1.0394943200720514 0.9793600497815161 1.024288110521868 1.1595521964843392 1.0 24.146827239163674 -6.272324314080658 23.943605167440314 1.0382332452677296 1.1621851557621232 0.5479729827773873 0.05463135585668873 329.86695312476775 725606.3521187545 0.019930964262949574 0.017767183823611914 5.341653167188848e-07 6.272324314080658 0.12395191049439358 GFFDPNTHENLTYLQLLER ddPTM_KYSE-520_SHP099_60min_R1 2 GFFDPNTHENLTYLQLLER 19 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4;A0A075B730;P58107 Q15149;Q15149-4;A0A075B730 PLEC;EPPK1 Plectin;Epiplakin 0 ; 242.18 6.3181e-26 1513070000.0 1555330.0 1550940.0 1061840.0 1059720.0 1727250.0 1539330.0 1132230.0 928440.0 1014690.0 952870.0 False True 1469052.7444265129 1476430.5143916004 1130287.9054040702 1160435.4701835653 1863174.7482918443 1529722.4704845292 1246686.8578999396 925219.4583395245 830447.8742533341 944428.3131216429 1.5554941799349655 1.5633060697974175 1.1967958707930948 1.2287173669623992 1.972806958882295 1.6197338106354506 1.3200439255990049 0.9796608651866578 0.8793127680685828 1.0 19.84908176736709 -7.148904965601455 2.952839011772032 0.936804359918382 1.5151153409771918 0.6067819912475743 0.20466522195912404 0.20409347084527288 3.3909091777769307 0.12468738046991207 0.06392249398296174 7.097330581590874e-08 7.148904965601455 0.5783109810588098 GFFDPNTHENLTYR ddPTM_KYSE-520_SHP099_60min_R1 4 GFFDPNTHENLTYR 14 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;; 181.26 4.1375e-09 2451950000.0 6810400.0 6158400.0 4331980.0 4060410.0 6971900.0 6327200.0 4998200.0 4895000.0 4712800.0 5121000.0 False True 6432613.535804192 5862541.220053149 4611226.3622130705 4446310.1455932185 7520548.865315326 6287709.597844325 5503466.833731197 4878020.387501586 3857074.3200200154 5075631.924077717 1.2673522493404699 1.1550367141956261 0.9085029078523986 0.8760111474003602 1.4816970532554663 1.2388033040805757 1.0842919494662178 0.9610666140626346 0.7599200213322949 1.0 22.275156020583246 -7.297069974006754 2.958938404451257 0.8781312446468894 1.1454306883757843 0.29370430839033146 0.17241696574990875 0.374490601784495 6.51433158358286 0.11723450896445128 0.051677378842331145 5.04579992527845e-08 7.297069974006754 0.2672994437288949 GFGDGYNGYGGGPGGGNFGGS(ph)PGYGGGR ddPTM_KYSE-520_SHP099_60min_R1 9 GFGDGYNGYGGGPGGGNFGGSPGYGGGR 28 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GFGDGYNGYGGGPGGGNFGGS(0.764)PGY(0.236)GGGR;GFGDGYNGYGGGPGGGNFGGS(0.746)PGY(0.254)GGGR;GFGDGYNGYGGGPGGGNFGGS(0.861)PGY(0.139)GGGR;GFGDGYNGYGGGPGGGNFGGS(0.777)PGY(0.223)GGGR;GFGDGYNGYGGGPGGGNFGGS(0.989)PGY(0.011)GGGR;GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR;GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR;GFGDGYNGYGGGPGGGNFGGS(1)PGYGGGR;GFGDGYNGYGGGPGGGNFGGS(0.997)PGY(0.003)GGGR 181.35 9.886e-15 6474640000.0 4448640.0 4565510.0 3961890.0 3370700.0 3817480.0 4170570.0 3561260.0 4346190.0 5025870.0 4739750.0 True False 4201865.071056018 4346176.046629781 4217279.768648128 3691050.3145620883 4117893.9575099987 4144539.9256356065 3921266.9153482397 4331114.081298376 4113298.699872474 4697759.502469695 0.8944402259943326 0.925159332729766 0.8977215130810825 0.7857044007088141 0.8765655107174279 0.8822375695172877 0.8347100172511515 0.9219531308534278 0.8755873300261625 1.0 22.163541427102672 -8.818720937794904 0.9021362161046057 1.0011982896688123 0.8735693958710475 0.47388608717614966 0.0389365070283986 3.847762613236746 3.4978258368874577 0.05295336982207055 0.013094056707985505 1.5180254833838084e-09 8.818720937794904 -0.12762889379776476 GFGDHIHWR ddPTM_KYSE-520_SHP099_60min_R1 2 GFGDHIHWR 9 0 V9GY50;V9GYV4;O95881 V9GY50 TXNDC12 Thioredoxin domain-containing protein 12 0 ; 150.4 0.00046074 3088900000.0 2952100.0 3189200.0 2796900.0 2669400.0 3647700.0 3131300.0 2930300.0 2693900.0 3087000.0 2263500.0 False True 2788341.1281345524 3035986.044913208 2977192.649198228 2923098.9734156257 3934753.2374260584 3111756.395203245 3226523.320972054 2684555.4896609876 2526478.616937231 2243447.1509763543 1.2428824663514177 1.3532683591819574 1.3270616372231214 1.3029497807173596 1.7538871979728352 1.3870424332701576 1.4381989428936903 1.1966207844444483 1.126159185803731 1.0 21.09728576808219 -7.5857371616251115 1.8607887176663052 1.0282711210950481 1.406344320933964 0.5221710510659696 0.13274869199305903 0.2948721595083922 1.847044627285987 0.12526996997926532 0.03937868759413714 2.5957498546950944e-08 7.5857371616251115 0.37807319983891596 GFGDLKS(ph)PAGLQVLNDYLADK ddPTM_KYSE-520_SHP099_60min_R1 1 GFGDLKSPAGLQVLNDYLADK 21 1 P24534;C9JZW3;F2Z2G2;F8WF65 P24534 EEF1B2 Elongation factor 1-beta 1 GFGDLKS(1)PAGLQVLNDYLADK 139.93 1.1512999999999999e-06 169250000.0 209280.0 206810.0 193690.0 176460.0 212450.0 200180.0 160820.0 186570.0 257330.0 165660.0 True False 197670.82121066304 196874.5371718613 206175.5673149573 193230.70534536664 229168.60632485303 198930.60236699943 177077.25505194897 185922.8322157655 210605.35876140516 164192.38128152958 1.2038976453586494 1.199047943852485 1.2556950919753211 1.1768554901097816 1.3957322778083905 1.2115702373906532 1.0784742487431653 1.132347498493101 1.2826743672125345 1.0 17.32502766036885 -10.160985101154433 4.355095007022931 0.9999542786203468 1.2134884468023173 0.3859484720223191 0.0813878112771168 58330651.90795122 2.387688457394533 27700.81795466593 0.020747064980624896 6.902634835162898e-11 10.160985101154433 0.21353416818197046 GFGFGQGAGALVHS(ph)E ddPTM_KYSE-520_SHP099_60min_R1 11 GFGFGQGAGALVHSE 15 0 E9PP21;P21291 E9PP21 CSRP1 Cysteine and glycine-rich protein 1 1 GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E;GFGFGQGAGALVHS(1)E 184.98 6.0571e-11 16502710000.0 12016170.0 11298850.0 11381630.0 9676830.0 10748120.0 10322680.0 9596750.0 9743210.0 12337790.0 10574710.0 True False 11349609.096458958 10756036.286080375 12115308.081051867 10596513.013754962 11593935.895562602 10258252.32511628 10566883.145254262 9709413.078592313 10097558.346375775 10481026.296399886 1.082871922605272 1.0262388416843256 1.1559276485369891 1.0110186458929833 1.1061832656163633 0.9787450231510129 1.00819164520977 0.9263799940972753 0.9634131296707243 1.0 23.32127665591828 -6.277541213825533 21.00200260870684 0.9727974570603751 1.0744392074221958 0.5817359579380798 0.04281980009490519 71.37711626129239 93097.51956403325 0.014450803309780151 0.012813615872056136 5.277871182834016e-07 6.277541213825533 0.10164175036182066 GFGFVCFSS(ph)PEEATK ddPTM_KYSE-520_SHP099_60min_R1 2 GFGFVCFSSPEEATK 15 0 P11940;P11940-2;E7ERJ7;E7EQV3;A0A087WTT1;H0YAR2;Q9H361;H0YB86;H0YEU6;A0A6I8PLA1;A0A6I8PS38;Q4VXU2;H0Y5F5;B1ANR0;Q13310-2;Q13310;Q13310-3 P11940;H0Y5F5 PABPC1;PABPC3;PABPC4;PABPC1L Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3;Polyadenylate-binding protein 1-like;Polyadenylate-binding protein 4 1 GFGFVCFS(0.002)S(0.998)PEEATK;GFGFVCFS(0.036)S(0.964)PEEATK 139.3 1.2331e-05 170222000.0 860890.0 790640.0 778350.0 696910.0 730650.0 815250.0 762310.0 845820.0 951990.0 805040.0 True False 813134.7155583318 752656.4676251658 828523.6864040319 763144.1168663679 788147.9981701747 810161.7223483678 839371.7342286484 842886.047835872 779132.6137149589 797907.9719116434 1.019083333144558 0.9432873139767445 1.0383699819655126 0.9564312473755744 0.9877680458335495 1.0153573480502602 1.0519655947510653 1.0563700044460884 0.9764692685652681 1.0 19.60586283476546 -6.353135559410656 4.103435855426276 1.026639815732652 0.9873656029810752 0.1678601163458423 0.033597261518361766 0.3477675303392222 10.5705769499376 0.011777665315697386 0.01034630670205092 4.4347019883350304e-07 6.353135559410656 -0.03927421275157672 GFGFVDFNS(ph)EEDAK ddPTM_KYSE-520_SHP099_60min_R1 10 GFGFVDFNSEEDAK 14 0 P19338;H7BY16 P19338 NCL Nucleolin 1 GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK;GFGFVDFNS(1)EEDAK 352.06 9.8737e-55 5381410000.0 7726500.0 7126560.0 7084150.0 6674040.0 7249360.0 7129810.0 6568420.0 6696880.0 8422450.0 7274900.0 True False 7297895.642604102 6784189.3604153525 7540805.64404077 7308338.754976705 7819843.388783872 7085310.211121264 7232419.995201604 6673650.086343546 6893145.392686433 7210450.045786548 1.0121276198104519 0.9408829292673232 1.045816224529184 1.0135759499848915 1.0845152992015283 0.9826446568701478 1.0030469595206328 0.9255525028210018 0.9559937797106668 1.0 22.781657878521393 -7.1051059537741565 5.1773589009739345 0.9557686605195207 1.0131564015201644 0.26618752994923356 0.0390016921541813 0.29399210439608525 11.73636645310942 0.01918522569572318 0.010930257726804091 7.850440859386274e-08 7.1051059537741565 0.0573877410006437 GFGFVDFNSEEDAK ddPTM_KYSE-520_SHP099_60min_R1 6 GFGFVDFNSEEDAK 14 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ;;;;; 234.63 2.0252e-17 1678050000.0 1595037.0 2117368.0 2133157.0 1068276.0 1977450.0 2160465.0 1490869.0 1664280.0 1956965.0 1968879.0 False True 1506557.117982572 2015646.4630458348 2270663.7133918745 1169804.6298511103 2133064.0648485753 2146980.7365511972 1641580.5879992808 1658507.001125874 1601629.4870730708 1951436.2638246855 0.7720247624330913 1.0329040719450922 1.1635858959295573 0.5994582818494778 1.0930739088900148 1.1002054109332056 0.8412166046263237 0.8498904278202304 0.8207439396119366 1.0 20.89610491277454 GFGFVLFK ddPTM_KYSE-520_SHP099_60min_R1 3 GFGFVLFK 8 0 Q14103-3;Q14103;H0YA96;H0Y8G5;Q14103-4;Q14103-2;D6RAF8;D6RF44;D6RBQ9;A0A087WUK2;O14979-3;O14979-2;O14979 Q14103-3;A0A087WUK2 HNRNPD;HNRNPDL Heterogeneous nuclear ribonucleoprotein D0;Heterogeneous nuclear ribonucleoprotein D-like 0 ;; 163.34 0.00038829 87187000.0 211373.0 250648.0 235504.0 193613.0 293053.0 311997.0 201991.0 185399.0 172107.0 145769.0 False True 199647.718328371 238606.49384968157 250684.96465972255 212013.92130812907 316114.6038565173 310049.71099358913 222410.2215221878 184755.89414145175 140856.7072644045 144477.60006656588 1.381859321004684 1.651512024976517 1.7351130178257614 1.4674518486633696 2.1879834916338052 2.1460054074177477 1.5394097176290003 1.2787857360333246 0.9749380332972509 1.0 17.14048630779997 -7.338855407848902 2.309002601133908 1.0087812992249634 1.7618774213356092 0.6109207399859901 0.24532913864265582 0.23317088634275823 2.34059256546178 0.19274348603024957 0.0758175667648024 4.5829444391326325e-08 7.338855407848902 0.7530961221106458 GFGFVSFER ddPTM_KYSE-520_SHP099_60min_R1 2 GFGFVSFER 9 0 P11940;P11940-2;E7ERJ7;E7EQV3;A0A087WTT1;H0YAR2;Q9H361;H0YAP2 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 ; 160.75 0.0010651 1223970000.0 888780.0 981930.0 673670.0 687090.0 1107630.0 971450.0 737830.0 693330.0 683770.0 731500.0 False True 839477.601660995 934756.6088930209 717095.8461101108 752390.8270188586 1194794.179447384 965386.8202089183 812417.0569268725 690925.0000544386 559614.6044389938 725019.4790983875 1.1578690309189268 1.2892848203960756 0.9890711446840982 1.0377525690130551 1.6479476950511651 1.3315322526360869 1.1205451444382846 0.9529743958240298 0.7718614748598394 1.0 19.467660230972836 -7.191836641050829 2.83400975695811 0.8849651576028319 1.240587340388523 0.411340885572818 0.17828983697003714 0.29330334046134626 4.580954607227639 0.11197925584026353 0.054621029062882534 6.429295084118949e-08 7.191836641050829 0.35562218278569113 GFGFVTFDDHDPVDK ddPTM_KYSE-520_SHP099_60min_R1 14 GFGFVTFDDHDPVDK 15 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;;;;;;;;;;; 261.35 9.413700000000001e-25 40715380000.0 18917990.0 17537380.0 12580360.0 11032300.0 18684610.0 19037500.0 13795280.0 13968380.0 13878320.0 15639920.0 False True 17868571.38262191 16694857.94065597 13391310.13488769 12080806.475018064 20154982.50611157 18918679.900897942 15189841.531358358 13919926.950024415 11358366.931976782 15501362.47647365 1.1527097317891226 1.076992939555712 0.8638795560849327 0.7793383641827001 1.300207161576971 1.2204527137282766 0.9799036410129699 0.89798086917525 0.7327334580566919 1.0 23.885891689495917 -7.186615548080618 3.4282459751328727 0.8578568591975081 1.0565403024734998 0.21728278245565058 0.15762638966206552 0.4098993083671581 9.332340263851792 0.09248297427414806 0.04789052794363269 6.507054615756705e-08 7.186615548080618 0.19868344327599174 GFGFVTFSSMAEVDAAMAARPHS(ph)IDGR ddPTM_KYSE-520_SHP099_60min_R1 1 GFGFVTFSSMAEVDAAMAARPHSIDGR 27 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GFGFVTFSSMAEVDAAMAARPHS(1)IDGR 66.87100000000001 0.018941 15748000.0 4013.0 5114.6 5206.1 5950.3 4186.5 3421.4 2880.3 3969.1 5122.7 3033.6 True False 3790.3908902828293 4868.886938828883 5541.693536054516 6515.814722977073 4515.95373207341 3400.0457734961115 3171.4688330190816 3955.332118494904 4192.546812758137 3006.724664105086 1.2606378414137205 1.619332490585082 1.843099769730306 2.167080611259237 1.5019512049060624 1.1308138101524812 1.0547919039214817 1.315495284857471 1.3943900027859706 1.0 11.55397704618316 -6.047767046530541 5.191702179144686 1.198709914784429 1.7367572829560574 0.5413184821624162 0.2358970702661803 0.17308845353818159 10.791219762849124 0.0835399318588173 0.08580944573253034 8.958451637297898e-07 6.047767046530541 0.5380473681716285 GFGFVTYATVEEVDAAMNAR ddPTM_KYSE-520_SHP099_60min_R1 2 GFGFVTYATVEEVDAAMNAR 20 0 F8W6I7;P09651-3;P09651-2;P09651;F8W646;F8VZ49;A0A2R8Y4L2;F8VYN5 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ; 250.8 1.7322e-23 0.0 25510.7 35595.7 34905.0 35226.0 34856.0 31517.0 30820.1 29444.0 33655.0 20950.5 False True 24095.57061668035 33885.62914176502 37155.03214997463 38573.8684489169 37598.96889648891 31320.290712362454 33935.69648318971 29341.865636281247 27544.100373509107 20764.894869242362 1.160399355181494 1.6318709704597405 1.7893195406931663 1.8576481456717497 1.8106987361723523 1.5083288843785618 1.6342821235977636 1.4130514900772926 1.3264743475445342 1.0 14.341858947098016 -7.879889315058361 1.006776408418341 1.0069005166240625 1.6569177154051842 0.5250964626752437 0.18808369698713132 0.41805035294930093 0.9413049381678656 0.1872109979146328 0.06361241962987513 1.3185927542586605e-08 7.879889315058361 0.6500171987811216 GFGFVTYATVEEVDAAMNARPHK ddPTM_KYSE-520_SHP099_60min_R1 5 GFGFVTYATVEEVDAAMNARPHK 23 1 F8W6I7;P09651-3;P09651-2;P09651;F8W646;F8VZ49;A0A2R8Y4L2;F8VYN5 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ;;;; 208.47 1.006e-20 414351000.0 1413467.0 1326563.0 1230257.0 1723497.0 1741901.0 1129671.0 989752.0 1095594.0 1264271.0 748654.0 False True 1335059.1678333916 1262832.9222683418 1309561.3347007986 1887297.6366917302 1878978.6986390566 1122620.3042588197 1089805.7912086598 1091793.6401275625 1034711.2560783459 742021.5080039994 1.7992189625670472 1.701881830440871 1.7648563021083485 2.5434540863491493 2.532242904512856 1.512921515278731 1.4686983860349043 1.4713773500507183 1.3944491432083517 1.0 19.501101479397445 -6.438380966324333 7.443318790190482 1.3889635773421434 2.0570949147351185 0.5767364114480463 0.30086751550536867 0.24716956635738493 19.191407534236898 0.11868193199784231 0.10425668159725272 3.644341223684599e-07 6.438380966324333 0.6681313373929751 GFGFVYFQNHDAADK ddPTM_KYSE-520_SHP099_60min_R1 3 GFGFVYFQNHDAADK 15 0 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 0 ;; 157.38 1.4285e-06 600391000.0 744530.0 659650.0 502990.0 432370.0 753930.0 698270.0 565610.0 515070.0 578300.0 524360.0 False True 703229.4367162418 627959.4238451642 535413.540212455 473462.31480321917 813260.0017250952 693911.8379198951 622787.3786216439 513283.3423882416 473295.297756658 519714.5783459065 1.3531070052997305 1.208277485391632 1.0302068914759204 0.9110044907920531 1.5648204526289304 1.335178705450991 1.1983257822087399 0.9876254463014419 0.9106831277718108 1.0 18.987360002583205 -7.2680884976899724 4.078118030512483 0.9549782150788902 1.2268246199569437 0.33889691366013497 0.16879217960858742 0.2793002797679447 11.224253426078704 0.1021981166545607 0.05003048908261232 5.394006957684137e-08 7.2680884976899724 0.27184640487805345 GFGLVAYAADS(ph)S(ph)DEEEEHGGHK ddPTM_KYSE-520_SHP099_60min_R1 2 GFGLVAYAADSSDEEEEHGGHK 22 0 Q7Z7F0 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 2 GFGLVAYAADS(1)S(1)DEEEEHGGHK;GFGLVAYAADS(1)S(1)DEEEEHGGHK 175.48 4.4039e-10 758140000.0 805660.0 899560.0 857060.0 853450.0 966570.0 844640.0 755280.0 901970.0 1038150.0 896030.0 True False 760968.4337566079 856343.787332912 912307.4589444845 934561.6314009014 1042633.5599689961 839368.2884566996 831631.0732224608 898841.2765913795 849648.1296318064 888091.8713007924 0.8568577850420067 0.9642513516970053 1.0272669848990097 1.0523253974074152 1.1740154297796304 0.9451367764770472 0.9364245976087663 1.0121039338811224 0.9567119766419241 1.0 19.760349402604763 -4.344319463764122 2.57837854163813 1.0151659817659997 0.8385642353973021 0.3493662236156856 0.06455043731738362 0.4836555554194556 4.669021997801208 0.018262391259581758 0.169982311451606 4.525645543406841e-05 4.344319463764122 -0.17660174636869763 GFGLVAYAADSS(ph)DEEEEHGGHK ddPTM_KYSE-520_SHP099_60min_R1 1 GFGLVAYAADSSDEEEEHGGHK 22 0 Q7Z7F0 Q7Z7F0 KIAA0907 UPF0469 protein KIAA0907 1 GFGLVAYAADS(0.007)S(0.993)DEEEEHGGHK 176.65 1.0019e-09 530130000.0 368090.0 391860.0 376350.0 358350.0 325900.0 311480.0 358270.0 195410.0 448910.0 288030.0 True False 347671.313930777 373034.4574061484 400610.12318129034 392407.4762581437 351546.47588265274 309535.9377823609 394487.42797824735 194732.16831903686 367399.26010019233 285478.27828394924 1.217855579137856 1.3066999690782495 1.403294588959325 1.374561590524369 1.2314298586773358 1.0842714186278049 1.3818474398457483 0.6821260429676114 1.2869604731704347 1.0 18.12302145118351 -6.688812301319492 1.063513341292048 1.0121576442294795 1.3226528685014318 0.29619902296890654 0.17729266628716414 0.6032444245820558 1.3707107375132161 0.11567636006888095 0.07007519132171955 2.0473292852563888e-07 6.688812301319492 0.3104952242719523 GFGQSNS(ph)LPTAGSVGGGMGR ddPTM_KYSE-520_SHP099_60min_R1 3 GFGQSNSLPTAGSVGGGMGR 20 0 Q9UPU9-2;Q9UPU9-3;Q9UPU9;G3V2R1 Q9UPU9-2 SAMD4A Protein Smaug homolog 1 1 GFGQSNS(0.998)LPT(0.002)AGSVGGGMGR;GFGQSNS(0.963)LPT(0.037)AGSVGGGMGR;GFGQSNS(0.999)LPT(0.001)AGSVGGGMGR 325.36 4.8272e-54 1944970000.0 2055990.0 2056640.0 1584890.0 1194980.0 1349540.0 1815760.0 1286060.0 1630660.0 1854470.0 1831330.0 True False 1941940.1361855452 1957835.927320425 1687054.5453136617 1308550.5399161633 1455741.1201677644 1804427.168318026 1416067.4955360612 1625003.621058905 1517744.9953843844 1815105.8409531799 1.0698770795458186 1.0786345805004363 0.9294524359128977 0.7209224445165107 0.80201445410109 0.9941167768874866 0.7801569823567045 0.8952665923908629 0.836174376799625 1.0 20.7916222452401 -4.879362430621054 3.9974206104312575 0.8546395706562908 1.0745136211116246 0.501664571460338 0.083373044932387 0.1634197871297583 4.745999530525452 0.021834788143582202 0.05011747291432529 1.3201934368195318e-05 4.879362430621054 0.2198740504553338 GFGS(ph)EEGSR ddPTM_KYSE-520_SHP099_60min_R1 2 GFGSEEGSR 9 0 Q9Y5S9 Q9Y5S9 RBM8A RNA-binding protein 8A 1 GFGS(1)EEGSR;GFGS(1)EEGSR 154.84 8.7803e-05 2373800000.0 4076500.0 3776100.0 3623700.0 3320500.0 3543700.0 3552300.0 3459700.0 3550200.0 4331600.0 3529500.0 True False 3850368.418698718 3594690.4879583493 3857289.500124998 3636079.3216552725 3822569.0291051124 3530128.778041218 3809440.2394181583 3537885.184822905 3545090.6307500224 3498231.37590945 1.1006614500156444 1.0275736798638204 1.1026399016051938 1.039405039556592 1.0927147516397033 1.0091181510609701 1.0889617724121528 1.0113353877009195 1.0133951273672943 1.0 21.738194282779805 -7.418994382821986 0.9235157653403643 0.996620103445446 1.0674766604206691 0.3875694991863008 0.03157719947598819 0.5591089357910183 0.8781807861814376 0.026679537419238945 0.010464644104246882 3.810707521425759e-08 7.418994382821986 0.07085655697522308 GFGS(ph)FR ddPTM_KYSE-520_SHP099_60min_R1 5 GFGSFR 6 0 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 GFGS(1)FR;GFGS(1)FR;GFGS(1)FR;GFGS(1)FR;GFGS(1)FR 79.45100000000001 0.026064 3781180000.0 3062860.0 2866850.0 3118800.0 2748030.0 2851620.0 2699260.0 2649460.0 3030490.0 3142280.0 2957160.0 True False 2892957.0501399655 2729122.222770419 3319842.8382564355 3009201.944974657 3076026.270501658 2682412.9171003453 2917293.2730377885 3019977.9375116844 2571721.1624326296 2930961.863035668 0.9870333308068566 0.9311353577094316 1.1326803259111649 1.026694336397115 1.049493788812299 0.9151988468120514 0.9953364831626561 1.0303709425900958 0.877432488926702 1.0 21.482942765476068 -6.242512625161482 24.92277565131432 0.9675452263325838 1.0262011912092364 0.19472211594173072 0.06251833116403009 1470.8006016627164 1936752.5334648527 0.020938003657647378 0.02090530772831991 5.721203225818038e-07 6.242512625161482 0.05865596487665259 GFGS(ph)VEELCTNSSLGMEK ddPTM_KYSE-520_SHP099_60min_R1 7 GFGSVEELCTNSSLGMEK 18 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 GFGS(1)VEELCTNSSLGMEK;GFGS(1)VEELCTNSSLGMEK;GFGS(1)VEELCTNSSLGMEK;GFGS(1)VEELCTNSSLGMEK;GFGS(1)VEELCTNSSLGMEK;GFGS(1)VEELCTNSSLGMEK;GFGS(1)VEELCTNSSLGMEK 377.88 3.180399999999999e-73 3578091000.0 3791830.0 3794180.0 3195240.0 2889800.0 3102830.0 3742070.0 3149430.0 3445300.0 4240100.0 3764940.0 True False 3581489.6310742996 3611901.8976197145 3401210.2829647623 3164445.72314995 3347005.068312274 3718714.3530796138 3467805.119874766 3433349.058439061 3470204.7242227243 3731585.5606789985 0.9597769025621946 0.9679268608174413 0.91146517416202 0.8480163918777058 0.8969391198156672 0.9965507403246993 0.9293114316917244 0.9200778067686406 0.9299544839034286 1.0 21.831357335054413 -6.212114493813873 24.999662674788 0.9485672372281961 0.915543435045541 0.17650466734670667 0.040124677406713466 867.118580563514 439487.12999695144 0.014480384154486953 0.014480373086913146 6.136002193407405e-07 6.212114493813873 -0.033023802182655104 GFGSSAPEGLEPDSMASAASALHLLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 GFGSSAPEGLEPDSMASAASALHLLSPR 28 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GFGSSAPEGLEPDS(0.001)MAS(0.029)AAS(0.114)ALHLLS(0.856)PR;GFGSSAPEGLEPDSMAS(0.001)AAS(0.004)ALHLLS(0.996)PR;GFGSSAPEGLEPDSMASAASALHLLS(1)PR;GFGSSAPEGLEPDSMASAASALHLLS(1)PR;GFGSSAPEGLEPDSMASAASALHLLS(1)PR;GFGSSAPEGLEPDSMASAASALHLLS(1)PR 284.55 3.9677e-52 734149000.0 409607.0 857381.0 697170.0 979612.0 478793.0 749077.0 614872.0 649467.0 892568.0 851452.0 True False 386885.283178689 816191.1298048818 742110.693711441 1072714.0299489119 516471.28514048114 744401.7325869951 677029.2623324343 647214.1505637377 730500.1510082389 843908.7976996312 0.4584444246028484 0.9671556121108067 0.8793730978209061 1.2711255444580853 0.611998934657755 0.8820878922178825 0.8022540636830834 0.7669242841500722 0.8656150439472521 1.0 19.68672756790001 GFIDQNLS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 6 GFIDQNLSPTK 11 0 F8WAY9;C9JTZ9;Q14188 F8WAY9 TFDP2 Transcription factor Dp-2 1 GFIDQNLS(0.978)PT(0.022)K;GFIDQNLS(0.988)PT(0.012)K;GFIDQNLS(0.999)PT(0.001)K;GFIDQNLS(1)PTK;GFIDQNLS(0.998)PT(0.002)K;GFIDQNLS(0.995)PT(0.005)K 181.76 2.4045e-06 5164980000.0 9775040.0 9350090.0 7616650.0 7160100.0 7700890.0 9466090.0 8102370.0 9530910.0 10379960.0 9975230.0 True False 9232799.045140857 8900897.641628776 8107631.446070888 7840593.7512374455 8306906.2309296075 9407008.621042212 8921436.631110933 9497849.497741126 8495220.921497827 9886857.222811503 0.9338456940430405 0.900275733839074 0.8200413198406985 0.7930319589471965 0.840196843519036 0.9514660128132367 0.9023531371047719 0.9606540565617921 0.85924381530434 1.0 23.23708056759673 -6.258130596818634 24.947265050919782 0.9302598920631729 0.8541957572263099 0.36559737544401794 0.050626318482949746 342.23942288549966 2580392.2171414685 0.017745421885647726 0.017041852914571096 5.519114488738772e-07 6.258130596818634 -0.07606413483686303 GFKDQIYDIFQK ddPTM_KYSE-520_SHP099_60min_R1 3 GFKDQIYDIFQK 12 1 P60842;P60842-2;J3KT12;J3QS69;J3KSZ0;J3QL43;J3KTB5;J3KTN0;J3QR64 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ;; 145.6 2.9086999999999998e-05 2354020000.0 3314660.0 3273090.0 2689080.0 1991220.0 3722270.0 2668730.0 2225320.0 2091610.0 2411750.0 1757580.0 False True 3130789.202189106 3115845.84339175 2862422.3994801254 2180464.9501178754 4015191.4721807977 2652073.4661548687 2450277.0626302906 2084354.6930954447 1973836.995269962 1742009.2085765486 1.7972288474567675 1.7886506156519157 1.6431729438555047 1.2516954212312132 2.304919774483706 1.5224221853120758 1.406581004604729 1.1965233494940233 1.133080689557805 1.0 20.732320819628693 -6.994275329925943 1.73070204355631 1.0972700394117596 1.7308997083569975 0.5581631700519414 0.24759598430235352 0.2992273344357553 1.757707382705257 0.15813772649848423 0.07918743949380427 1.013268799456143e-07 6.994275329925943 0.6336296689452379 GFLKGIEY(ph)ADS(ph)FT(ph)FNPSK ddPTM_KYSE-520_SHP099_60min_R1 2 GFLKGIEYADSFTFNPSK 18 1 P19113-2;P19113 P19113-2 HDC Histidine decarboxylase 3 GFLKGIEY(1)ADS(1)FT(1)FNPS(0.001)K;GFLKGIEY(1)ADS(1)FT(1)FNPS(0.001)K 56.528999999999996 0.023219999999999998 1496260000.0 594550.0 698750.0 644700.0 766270.0 603220.0 572590.0 515640.0 571170.0 879630.0 473740.0 True False 561569.1262939586 665181.0011548679 686258.3935564723 839096.0704125243 650689.9821476938 569016.2534185244 567765.9233614414 569188.74458208 719911.3656677995 469543.0321641434 1.1959907565993753 1.4166561009094758 1.4615452611307609 1.7870482851062564 1.3857941393542494 1.2118511285236302 1.2091882627766501 1.2122184881727782 1.5332170138905012 1.0 18.84089785690563 -6.006755314460973 24.979417672723788 1.2510264597485627 1.4771727930654035 0.2682817873316681 0.18067363955042012 448.47377732795854 1658348.282063499 0.05815278897006245 0.06356089438870885 9.845656629511261e-07 6.006755314460973 0.22614633331684075 GFLS(ph)PGSR ddPTM_KYSE-520_SHP099_60min_R1 4 GFLSPGSR 8 0 Q5UIP0;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 GFLS(1)PGSR;GFLS(0.999)PGS(0.001)R;GFLS(1)PGSR;GFLS(0.998)PGS(0.002)R 129.83 0.0012255 966790000.0 2042700.0 2086160.0 1781320.0 1572950.0 1973250.0 1762500.0 1611550.0 1610700.0 1966560.0 1853600.0 True False 1929387.358978503 1985937.742209999 1896146.7374127705 1722442.6950753375 2128533.548743309 1751499.5837338215 1774461.2012123386 1605112.857640208 1609482.2769433365 1837178.546078978 1.0501904472465797 1.0809715508862827 1.0320971478028884 0.9375477950967166 1.1585882892472041 0.9533638347083804 0.9658621395288473 0.8736836498912643 0.8760619812257195 1.0 20.80906041081181 -6.497090006034826 19.682349469625827 0.9242662212361442 1.047037927279128 0.479340151852488 0.06177726071586219 45.382393967066676 34636.68002439035 0.021826877220518463 0.01910752671505232 3.183537676139993e-07 6.497090006034826 0.12277170604298371 GFLS(ph)SGGSPLRPANASLEEMASLEEEACSLK ddPTM_KYSE-520_SHP099_60min_R1 1 GFLSSGGSPLRPANASLEEMASLEEEACSLK 31 1 H7C1D0;H7C1W4;Q93075 H7C1D0 TATDN2 Putative deoxyribonuclease TATDN2 1 GFLS(0.387)S(0.342)GGS(0.269)PLRPANAS(0.002)LEEMASLEEEACSLK 129.07 4.9406999999999996e-05 32253000.0 16382.0 22465.0 18345.0 17066.0 16370.0 18836.0 19215.0 19650.0 20538.0 18767.0 True False 15473.257803292627 21385.747679347525 19527.548053037804 18687.947508920006 17658.225867441004 18718.43753714057 21157.439720328304 19581.83873634448 16808.816920847723 18600.73898050505 0.8318625308117997 1.1497257018531022 1.0498264651476545 1.0046884442874209 0.9493292651409242 1.0063276279914941 1.1374515680534447 1.0527452031270206 0.903663931764464 1.0 14.183072318212428 GFNNIS(ph)ELLPR ddPTM_KYSE-520_SHP099_60min_R1 1 GFNNISELLPR 11 0 O94933 O94933 SLITRK3 SLIT and NTRK-like protein 3 1 GFNNIS(1)ELLPR 59.8 0.040274000000000004 131630000.0 298280.0 312330.0 249580.0 250230.0 277450.0 246120.0 237750.0 306930.0 369280.0 259590.0 True False 281733.8137935614 297325.19798311254 265668.3261421194 274011.78396560735 299283.73652544286 244583.87378642143 261784.09021639643 305865.3314680006 302228.0607912478 257290.23455796408 1.0950039136836751 1.1556023433766551 1.032562804408606 1.0649909991196191 1.1632145193525338 0.9506146792031469 1.0174660949186547 1.1887949497713766 1.174658110559419 1.0 17.973037175106818 -10.521489647249613 3.0269340571985337 0.9967585914269967 1.0912344597524715 0.12446079399923349 0.07427172683194068 25283271.230145723 35512344.00118851 697008.4812995815 0.020017098302132927 3.009610911389993e-11 10.521489647249613 0.09447586832547472 GFQFVSS(ph)SLPDICYR ddPTM_KYSE-520_SHP099_60min_R1 1 GFQFVSSSLPDICYR 15 0 P62633-2;P62633-8;P62633-5;P62633;P62633-4;P62633-6 P62633-2 CNBP Cellular nucleic acid-binding protein 1 GFQFVS(0.11)S(0.445)S(0.445)LPDICYR 94.20299999999999 0.0028057 16236000.0 156450.0 149860.0 177800.0 162390.0 177720.0 164060.0 154390.0 182080.0 214550.0 178630.0 True False 147771.406624657 142660.5006555539 189261.27249005865 177823.49677566608 191705.55291152204 163036.04068503302 169997.2479011964 181448.40697779137 175593.12836536535 177047.47717203718 0.8346428256702432 0.8057753938901403 1.068985989030238 1.0043831158513197 1.0827917797735214 0.9208605696573172 0.9601788775335665 1.0248573426520944 0.9917855434604209 1.0 17.433776760711122 -4.752022727131322 24.9999954173495 1.0055214773942822 0.8202090096614241 0.733376027119243 0.044980982466689724 99.07902832733824 263036.53767513385 0.01181364485262635 0.030374123948693998 1.770016328897026e-05 4.752022727131322 -0.18531246773285814 GFQVAPEHHNDHK ddPTM_KYSE-520_SHP099_60min_R1 1 GFQVAPEHHNDHK 13 0 P21399 P21399 ACO1 Cytoplasmic aconitate hydratase 0 69.92 0.026195 947050000.0 1931700.0 1520500.0 1139400.0 1444400.0 1663400.0 1603800.0 1304600.0 1262400.0 1641500.0 916380.0 False True 1824544.7502515204 1447452.897682969 1212847.5471044583 1581675.3417253038 1794300.116548649 1593790.0893005976 1436481.6996690268 1258021.029046375 1343444.9788475754 908261.586132852 2.008831792633629 1.5936520048655334 1.335350482308138 1.7414315059383687 1.9755323179397302 1.7547698962878662 1.5815726676113238 1.3850866845560543 1.4791388289001897 1.0 19.792748338765758 -7.984741161101043 0.8176125905980328 1.0125531393054954 1.7185307030114148 0.5742489146639721 0.18925164214395154 0.5276392630875587 0.8043666678638545 0.1968764946556096 0.07246397220083252 1.035759293836557e-08 7.984741161101043 0.7059775637059194 GFS(ph)FVATGLMEDDGKPR ddPTM_KYSE-520_SHP099_60min_R1 3 GFSFVATGLMEDDGKPR 17 1 E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2;Q5SVM6 E9PGT3 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 1 GFS(1)FVATGLMEDDGKPR;GFS(0.998)FVAT(0.002)GLMEDDGKPR;GFS(0.999)FVAT(0.001)GLMEDDGKPR 170.53 1.7412e-08 276620000.0 52361.0 63365.0 62106.0 65613.0 65993.0 76552.0 82514.0 109130.0 116208.0 121691.0 True False 49456.43095093428 60320.850287195964 66109.45213311346 71848.83979273225 71186.27365119327 76074.21057247734 90855.32037903578 108751.45350113344 95107.55656528738 120612.91241416533 0.41004258964503615 0.500119341120492 0.5481125595085893 0.5956977437541255 0.5902044169761117 0.6307302348462555 0.7532802132084601 0.9016568070895963 0.7885354450168929 1.0 16.880024840038697 -6.656295306787539 0.35001857125618635 1.0198324429465322 0.3869627073369691 0.9303550229338817 0.04633300033356239 0.38085114993173563 0.11310926789597253 0.060094410227396595 0.08692948029613068 2.2065038685619623e-07 6.656295306787539 -0.6328697356095632 down GFS(ph)LEELR ddPTM_KYSE-520_SHP099_60min_R1 1 GFSLEELR 8 0 P26373;J3QSB4;P26373-2 P26373 RPL13 60S ribosomal protein L13 1 GFS(1)LEELR 96.665 0.0071181 0.0 111590.0 117920.0 95024.0 114240.0 109120.0 103780.0 96839.0 109480.0 128320.0 103970.0 True False 105399.88025084994 112254.94619847146 101149.39908377577 125097.33525249145 117707.12319212963 103132.27052476374 106628.43117756308 109100.23943282408 105020.32268396045 103048.90668743609 1.0228141533858746 1.0893366053747544 0.9815669310357477 1.2139608199040073 1.1422452403998256 1.000808973525362 1.034736171447061 1.058722920406547 1.0191308773658703 1.0 16.652969672909503 -6.276168338776561 24.602317908492125 1.0271034948740199 1.090813092191457 0.2331326171832836 0.060761008694284704 1144.8219152927463 1912232.0040711733 0.022425618675446384 0.01985182001109785 5.294581785206447e-07 6.276168338776561 0.06370959731743708 GFSDKLDFLEGDQKPLAQR ddPTM_KYSE-520_SHP099_60min_R1 1 GFSDKLDFLEGDQKPLAQR 19 2 H7C2Q8;Q99848 H7C2Q8 EBNA1BP2 Probable rRNA-processing protein EBP2 0 126.22 1.2669e-05 796740000.0 513340.0 360670.0 308120.0 296650.0 464980.0 393160.0 332620.0 334000.0 356050.0 271730.0 False True 484864.0068820805 343342.8718232927 327981.90820943104 324843.5268089251 501571.28062569996 390706.1426047026 366244.47565837094 332841.43195618596 291400.2952900881 269322.6836027413 1.8003088354684187 1.274838298914819 1.2178027629236525 1.2061498959667232 1.8623432453448001 1.4506989807847208 1.3598723685621374 1.235846262571543 1.0819745718853446 1.0 18.038976219846386 -7.516149277952794 1.5640152348412018 1.0117857998603874 1.4508780540096038 0.3954516067863947 0.20959915814318883 0.45442569679666334 1.975459258015388 0.1962769968904518 0.0646384825088187 3.0468475313763895e-08 7.516149277952794 0.4390922541492164 GFSLEELR ddPTM_KYSE-520_SHP099_60min_R1 7 GFSLEELR 8 0 P26373;J3QSB4;P26373-2 P26373 RPL13 60S ribosomal protein L13 0 ;;;;;; 175.86 0.00058418 3308535000.0 6254720.0 6623420.0 5174380.0 4093800.0 6396480.0 6286210.0 5246470.0 5804770.0 6015020.0 5937620.0 False True 5907758.213124796 6305220.961243895 5507928.814100722 4482873.521154151 6899846.585007276 6246975.431638791 5776834.388212901 5784634.6077135075 4922843.994314804 5885017.306198465 1.003864203917018 1.0714022802622596 0.9359239790679001 0.7617434729431486 1.172442870769459 1.0615050231133714 0.9816172302719282 0.9829426672408885 0.8365045909261405 1.0 22.488615227158835 -7.5502299311422085 24.245700843960616 0.9154092336431406 0.9976098272644901 0.0809143927030801 0.10639972604448031 422.8152481567631 374797.632728939 0.07391801153590286 0.027939901163047984 2.816891172751371e-08 7.5502299311422085 0.08220059362134946 GFSQYGVS(ph)GSPTK ddPTM_KYSE-520_SHP099_60min_R1 1 GFSQYGVSGSPTK 13 0 Q9NXC5 Q9NXC5 MIOS WD repeat-containing protein mio 1 GFSQYGVS(0.925)GS(0.075)PTK 148.18 3.5863e-05 678200000.0 2146300.0 2070900.0 1652600.0 1579200.0 1712500.0 2019400.0 1841900.0 1880700.0 2343300.0 1953800.0 True False 2027240.4604570265 1971410.8555157275 1759129.2402534909 1729286.6931962073 1847264.0072078616 2006796.1755416065 2028097.2272116956 1874176.2906586777 1917815.7897858804 1936490.8520333974 1.0468629161497656 1.01803261990402 0.9084108186756115 0.8930001871066847 0.9539234359243971 1.0363055283397726 1.047305348787012 0.9678208852320233 0.9903562352345184 1.0 20.885013255427214 -6.244354529341049 23.981701715411447 1.0087806397636814 0.9600074147445293 0.17703330415222185 0.04736668504708519 914.0257808583838 1283001.1417401156 0.01758633108858561 0.017532434875667278 5.696990177409199e-07 6.244354529341049 -0.048773225019152044 GFSQYGVSGS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 4 GFSQYGVSGSPTK 13 0 Q9NXC5 Q9NXC5 MIOS WD repeat-containing protein mio 1 GFSQYGVS(0.056)GS(0.935)PT(0.008)K;GFSQYGVS(0.003)GS(0.694)PT(0.303)K;GFSQYGVS(0.006)GS(0.754)PT(0.241)K;GFSQYGVS(0.002)GS(0.995)PT(0.003)K 164.41 9.2743e-07 2578020000.0 6253070.0 6067570.0 5033380.0 4791780.0 5093650.0 5794840.0 4872130.0 5703970.0 6914340.0 5531640.0 True False 5906199.741913994 5776074.829591748 5357839.728492742 5247189.330498815 5494491.276095961 5758672.254073239 5364652.447806562 5684184.259386602 5658870.152327105 5482633.973150803 1.0772558902960603 1.0535218761416438 0.9772382680899009 0.9570562901326274 1.0021627019062782 1.0503477493252755 0.9784808677869047 1.0367615797849752 1.0321444364222296 1.0 22.386437730220077 -9.93594133812201 13.826859360705667 0.9999999999998498 1.0161905386125085 0.01884364520338444 0.03687811515038097 0.0 0.0 0.03805626059279385 0.009229998949418826 1.1589338873794943e-10 9.93594133812201 0.016190538612658734 GFSTWLK ddPTM_KYSE-520_SHP099_60min_R1 1 GFSTWLK 7 0 P26038;V9GZ54 P26038 MSN Moesin 0 94.262 0.049205 280800000.0 292230.0 334740.0 261420.0 195020.0 334790.0 287740.0 255610.0 269750.0 309610.0 267540.0 False True 276019.4193539376 318658.5879450166 278271.55148678884 213554.6421650989 361136.06830547197 285944.1079282661 281449.55331319943 268814.3002101232 253392.62863295648 265169.8037429704 1.0409157281780235 1.2017152158618067 1.0494088978416185 0.8053505306814566 1.361904949990165 1.0783434006891384 1.0613936780901683 1.0137440101237372 0.9555862886958669 1.0 18.016556972094687 -7.2700414003230645 2.3242752305220407 0.9796397397748333 1.090892974151351 0.10587067602725098 0.1315119209870158 0.7708146704004215 7.951215660327645 0.09055388775310558 0.03826737035873593 5.369806047684693e-08 7.2700414003230645 0.11125323437651757 GFSVVADT(ph)PELQR ddPTM_KYSE-520_SHP099_60min_R1 11 GFSVVADTPELQR 13 0 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 1 GFS(0.002)VVADT(0.998)PELQR;GFS(0.002)VVADT(0.998)PELQR;GFSVVADT(1)PELQR;GFSVVADT(1)PELQR;GFSVVADT(1)PELQR;GFSVVADT(1)PELQR;GFSVVADT(1)PELQR;GFSVVADT(1)PELQR;GFSVVADT(1)PELQR;GFSVVADT(1)PELQR;GFSVVADT(1)PELQR 283.66 2.2946999999999996e-29 30162050000.0 24628000.0 29887700.0 22997700.0 18397460.0 18531290.0 24247500.0 19035990.0 23318100.0 28153600.0 25176200.0 True False 23261835.74529917 28451850.029647667 24480168.539621044 20145949.067001957 19989597.094383046 24096162.358346548 20960333.642559078 23237214.953585427 23041615.934500825 24953158.45478721 0.9322200950010975 1.1402103698094876 0.9810448879237801 0.8073506647867658 0.8010848458563804 0.9656558067391164 0.839987197634209 0.931233414627214 0.9233947668889323 1.0 24.572719100963013 -5.007005040562035 24.746562467459867 0.8897106429813666 1.0423183473891753 0.3572257158410286 0.07720412107722892 263.50296037814275 930885.3772549926 0.019745494367878737 0.0387053788521813 9.839996850766788e-06 5.007005040562035 0.1526077044078087 GFTECEMTKS(ph)SPLK ddPTM_KYSE-520_SHP099_60min_R1 4 GFTECEMTKSSPLK 14 1 Q9NQW6 Q9NQW6 ANLN Actin-binding protein anillin 1 GFT(0.009)ECEMT(0.177)KS(0.407)S(0.407)PLK;GFTECEMT(0.013)KS(0.671)S(0.317)PLK;GFTECEMTKS(0.736)S(0.263)PLK;GFTECEMT(0.016)KS(0.492)S(0.492)PLK 244.67 2.2977e-18 4957780000.0 10139500.0 11010300.0 10500300.0 6665500.0 7633000.0 8197900.0 6632200.0 6984400.0 11998100.0 7936500.0 True False 9577041.722407864 10481348.661202772 11177166.139074007 7298987.115944351 8233673.674170864 8146733.865243394 7302647.500034431 6960172.7465712195 9819547.487487737 7866188.784503571 1.2174945179646186 1.3324557734809364 1.4209125213334668 0.9278937126862999 1.0467170188428785 1.035664676811787 0.9283590440164214 0.8848214729199981 1.2483233947845611 1.0 22.907233379962847 -5.263579700011258 24.99984830509593 1.0046208360582092 1.3245044276724403 0.6539358514143123 0.10440871368838173 109.2515699508285 1276108.7632236872 0.028607898859009284 0.044885545571020834 5.450298647783664e-06 5.263579700011258 0.3198835916142311 GFTECEMTKSS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 5 GFTECEMTKSSPLK 14 1 Q9NQW6 Q9NQW6 ANLN Actin-binding protein anillin 1 GFTECEMTKS(0.008)S(0.992)PLK;GFTECEMTKS(0.094)S(0.906)PLK;GFTECEMT(0.009)KS(0.04)S(0.951)PLK;GFTECEMTKS(0.01)S(0.99)PLK;GFTECEMTKS(0.122)S(0.877)PLK 232.15 4.0172e-16 12556200000.0 15104070.0 15652130.0 15621360.0 9497540.0 10809220.0 12649950.0 9613190.0 10563720.0 17613250.0 12546340.0 True False 14266217.127882944 14900178.180473883 16628337.86065971 10400183.346060466 11659844.117951162 12570996.969789313 10584985.060893217 10527076.920910774 14415127.793900121 12435189.188504817 1.1472456841324734 1.1982268990525469 1.3372002314231834 0.8363510348257889 0.9376491134312304 1.0109212476968215 0.8512122252774456 0.8465554292203358 1.1592206258691724 1.0 23.567925121041903 -5.262469786527786 24.99999854098514 0.9405027917926088 1.2246245379175198 0.6114222232296631 0.10166044302936307 59.008204202324954 1431687.1439976688 0.027922409851540455 0.044223759728754766 5.464245628195623e-06 5.262469786527786 0.28412174612491103 GFTIPEAFR ddPTM_KYSE-520_SHP099_60min_R1 2 GFTIPEAFR 9 0 O00299 O00299 CLIC1 Chloride intracellular channel protein 1 0 ; 152.47 0.0018276 1644780000.0 1731350.0 2070610.0 1259800.0 1114050.0 1629940.0 1865220.0 1312430.0 1595590.0 1398390.0 1591630.0 False True 1635308.564139344 1971134.7875510275 1341008.7237512697 1219928.9770486532 1758207.0049100046 1853578.47011177 1445103.2324824606 1590055.2707035067 1144477.6265432008 1577529.396469404 1.0366263651246392 1.2495074842741654 0.8500689285109486 0.7733161611941559 1.1145320073559115 1.174988227959605 0.9160547091652806 1.007940184355446 0.7254873532655579 1.0 20.589235458681273 -7.628542223408325 12.191527691616551 0.8628735045527999 1.015417695281522 0.14282677806565336 0.14967981821265722 0.9301180949622779 101.4133739725402 0.10511932242521665 0.03968520722447527 2.3521108030256894e-08 7.628542223408325 0.15254419072872205 GFVLHK ddPTM_KYSE-520_SHP099_60min_R1 2 GFVLHK 6 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 ; 93.595 0.024206000000000002 1203650000.0 2202410.0 2031340.0 1614920.0 1542620.0 2271940.0 1938360.0 1636090.0 1850040.0 1705700.0 1775990.0 False True 2080237.9269045133 1933751.3772964985 1719020.3271633596 1689230.140994385 2450728.752429681 1926261.9762418657 1801481.943899658 1843622.643042584 1395987.8771978752 1760256.1102993106 1.1817813980209924 1.0985625137058532 0.9765739866518973 0.9596502072116946 1.3922569210755154 1.0943077913328918 1.0234203610253836 1.0473604563878478 0.7930595264120424 1.0 20.747353919878698 -7.370633226535903 1.9675392574024542 0.9071603138863796 1.109750468344391 0.28451073672264016 0.12579406843469806 0.48259773311005993 3.4157786175886455 0.10231128473631367 0.03757776438112805 4.259579943486764e-08 7.370633226535903 0.20259015445801143 GFY(ph)T(ph)NS(ph)QCYS(ph)HQRS(ph)HSGEK ddPTM_KYSE-520_SHP099_60min_R1 1 GFYTNSQCYSHQRSHSGEK 19 1 Q9NZL3 Q9NZL3 ZNF224 Zinc finger protein 224 5 GFY(0.997)T(0.997)NS(0.997)QCY(0.482)S(0.517)HQRS(0.505)HS(0.505)GEK 40.515 0.063876 0.0 9723.6 14325.0 9944.8 14596.0 7956.4 8477.4 9251.3 10528.0 11948.0 8228.2 True False 9184.212524483963 13636.805497736628 10585.857720242591 15983.199451552591 8582.523414276578 8424.48940206814 10186.511687987162 10491.480825253671 9778.54438456951 8155.304549442729 1.126164261408428 1.6721393315309683 1.2980334034203478 1.9598531673038209 1.052385396798338 1.0330073329565364 1.2490657615825311 1.2864609484106364 1.1990409831154252 1.0 12.993523038210741 -5.837098815496387 24.99999991626 1.1514194096158061 1.5100024208098166 0.4061709291698421 0.2230960596949184 38.240915158240675 12634.416165641156 0.06658211462859352 0.07549704538103527 1.4551279560644467e-06 5.837098815496387 0.3585830111940105 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKS(ph)VSGTDVQEECR ddPTM_KYSE-520_SHP099_60min_R1 1 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKSVSGTDVQEECR 41 2 P49321-4;P49321;P49321-3;E9PPR5 P49321-4 NASP Nuclear autoantigenic sperm protein 1 GGAAPEGPNEAEVTSGKPEQEVPDAEEEKS(0.814)VS(0.182)GT(0.003)DVQEECR 282.98 5.2286e-54 1071600000.0 420970.0 373140.0 336950.0 339480.0 338320.0 358510.0 327710.0 430540.0 487560.0 396440.0 True False 397617.95491711004 355213.7943054416 358670.3361390615 371744.0771316163 364943.85922251944 356272.40610746795 360838.1249413891 429046.55722879147 399031.39438740443 392927.85002565273 1.0119363004967734 0.9040178604857128 0.9128147473273918 0.9460873722932762 0.9287808415684805 0.9067120238084633 0.9183317622251295 1.0919219831345135 1.015533498990599 1.0 18.58390490151046 -7.2482603607580005 24.93694631559021 1.0402958061655891 0.9301713638390449 0.6219456222947584 0.03676781433852458 418.65730043887623 792172.2529512318 0.016728259225776525 0.009579612618354308 5.645983950138907e-08 7.2482603607580005 -0.11012444232654428 GGAGAWLGGPAASLS(ph)PPKGSSASQGGSK ddPTM_KYSE-520_SHP099_60min_R1 2 GGAGAWLGGPAASLSPPKGSSASQGGSK 28 1 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 GGAGAWLGGPAAS(0.02)LS(0.925)PPKGS(0.039)S(0.014)AS(0.002)QGGS(0.001)K;GGAGAWLGGPAAS(0.03)LS(0.969)PPKGSSASQGGSK 89.652 5.7829999999999995e-06 0.0 541670.0 685650.0 445460.0 397820.0 438920.0 573030.0 394320.0 465820.0 614800.0 485310.0 True False 511622.4853076256 652710.3448183684 474175.06436119985 435628.6931910553 473460.5068868178 569453.5072153141 434181.71379234263 464204.1791432052 503167.81784678064 481010.5309654665 1.0636409233717106 1.356956454795849 0.9857893618450582 0.9056531305389043 0.9843038278943819 1.183869105884913 0.9026449232220949 0.9650603245868065 1.0460640369699201 1.0 18.875708954306017 -4.787681207126403 24.999982571725067 0.9950601254798765 1.2102986983028767 0.42458620219869325 0.09946229491650264 171.76439012156 163635.7500158912 0.025458519286240443 0.053022177198679334 1.6304924527362367e-05 4.787681207126403 0.21523857282300018 GGAGGS(ph)PGSSSGSGSSR ddPTM_KYSE-520_SHP099_60min_R1 5 GGAGGSPGSSSGSGSSR 17 0 Q8TAE6 Q8TAE6 PPP1R14C Protein phosphatase 1 regulatory subunit 14C 1 GGAGGS(0.985)PGS(0.01)S(0.004)S(0.001)GSGSSR;GGAGGS(0.937)PGS(0.059)S(0.005)SGSGSSR;GGAGGS(0.783)PGS(0.076)S(0.12)S(0.019)GS(0.001)GS(0.001)S(0.001)R;GGAGGS(0.868)PGS(0.062)S(0.062)S(0.007)GSGSSR;GGAGGS(0.793)PGS(0.146)S(0.023)S(0.032)GS(0.005)GS(0.001)S(0.001)R 229.02 9.7779e-19 965437000.0 850500.0 736762.0 616567.0 635706.0 554891.0 889534.0 893754.0 716663.0 979075.0 869823.0 True False 803321.069570284 701366.847617692 656311.8953620808 696123.3071080223 598557.7648020899 883982.0883501174 984103.3765184662 714177.0633234011 801299.6604722458 862117.0449320537 0.9318004722126755 0.8135401703755538 0.7612793404563842 0.8074580025997353 0.6942882852400445 1.025362035870416 1.1414962530940642 0.8283991918750288 0.9294557684280548 1.0 19.717524223890287 -6.27426479199068 24.961459563847868 0.9840022066310238 0.8004097939519511 0.49916653185986415 0.0917807866803831 700.5149295507555 1363373.4956491715 0.03389036488382177 0.030075815592495614 5.317839285035908e-07 6.27426479199068 -0.18359241267907267 GGAGGSPGS(ph)SSGSGSSR ddPTM_KYSE-520_SHP099_60min_R1 1 GGAGGSPGSSSGSGSSR 17 0 Q8TAE6 Q8TAE6 PPP1R14C Protein phosphatase 1 regulatory subunit 14C 1 GGAGGS(0.259)PGS(0.588)S(0.148)S(0.005)GSGSSR 103.79 0.00015408 7548700.0 13275.0 10470.0 8844.6 9999.9 7428.6 13619.0 15025.0 9261.1 13480.0 12584.0 True False 12538.609286943578 9967.005484209601 9414.73706786036 10950.287489420432 8013.188557047784 13533.998769288452 16543.873629869 9228.97540565699 11032.37180314671 12472.515550203858 1.0052991504779996 0.7991175031284443 0.7548386714744549 0.8779534044550824 0.6424677142949573 1.0851057843794185 1.3264263783257897 0.7399449909289667 0.8845346200403327 1.0 13.60646484758795 -6.2807070856554 24.9013074279805 1.0109004194409636 0.8150521447237409 0.25401210724963597 0.1638238480935584 1197.77986902611 1547988.74475863 0.060426911425395614 0.05337110770758072 5.239537033615096e-07 6.2807070856554 -0.19584827471722277 GGASS(ph)SCCEEEQTQGR ddPTM_KYSE-520_SHP099_60min_R1 2 GGASSSCCEEEQTQGR 16 0 Q9UJK0 Q9UJK0 TSR3 Ribosome biogenesis protein TSR3 homolog 1 GGASS(0.98)S(0.019)CCEEEQTQGR;GGAS(0.005)S(0.995)SCCEEEQTQGR 370.28 5.593999999999999e-72 330180000.0 525480.0 496460.0 463890.0 369590.0 474130.0 475430.0 449850.0 515810.0 548160.0 484780.0 True False 496330.57688159024 472609.3163983472 493793.09165024286 404715.722478715 511441.3335693216 472462.6650181958 495325.22811291675 514020.7755009591 448627.96198908775 480485.22635313304 1.0329778100540632 0.9836084243118904 1.0276967210794723 0.842306277657055 1.0644267617781809 0.9833032091416667 1.0308854485962426 1.0697951722727455 0.9336977234329537 1.0 18.874132547070094 GGAVERPLT(ph)PAPR ddPTM_KYSE-520_SHP099_60min_R1 2 GGAVERPLTPAPR 13 1 H9KVB4;O15417 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 GGAVERPLT(1)PAPR;GGAVERPLT(1)PAPR 82.34899999999999 0.018798 757240000.0 457980.0 503390.0 468790.0 453640.0 368640.0 512500.0 398750.0 403490.0 570860.0 528950.0 True False 432574.93643950386 479206.3887962051 499008.95349051984 496753.8092081611 397649.87072531745 509301.2973977772 439059.54142497637 402090.38736527425 467206.21420952043 524263.9145168723 0.825109118635672 0.9140556416853727 0.9518277716107434 0.947526227636585 0.7584917819334673 0.9714597615727878 0.8374780893122984 0.7669617843826133 0.8911660735606177 1.0 18.99993372191383 GGCGS(ph)PGLQCK ddPTM_KYSE-520_SHP099_60min_R1 1 GGCGSPGLQCK 11 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GGCGS(1)PGLQCK 91.292 0.0028217 528240000.0 562840.0 588690.0 533400.0 366120.0 469960.0 538880.0 421190.0 527970.0 628850.0 569320.0 True False 531618.1432062772 560408.4487582956 567783.8174701752 400915.93472200795 506943.1782933769 535516.6500326137 463767.9956182715 526138.5952991248 514666.69201845815 564276.267724258 0.9421238737370756 0.993145522526472 1.006216015002834 0.7104958291776352 0.8983953557676507 0.9490327356710699 0.8218810929062476 0.9324131199439887 0.9120828244188318 1.0 19.106042148568942 GGCVS(ph)PERGPTFNPK ddPTM_KYSE-520_SHP099_60min_R1 1 GGCVSPERGPTFNPK 15 1 Q9ULD5 Q9ULD5 ZNF777 Zinc finger protein 777 1 GGCVS(1)PERGPTFNPK 115.34 0.00042187 0.0 139100.0 183750.0 137190.0 118300.0 183740.0 140880.0 118360.0 156560.0 211090.0 140200.0 True False 131383.84571102468 174922.37418562677 146033.48691176105 129543.19643180816 198199.29266240742 140000.7156632173 130324.98388228267 156016.9299013788 172761.37714586337 138957.93707394955 0.9454936398566844 1.2588152779825592 1.0509186447841845 0.9322475502991159 1.4263258136664139 1.007504275115374 0.9378736229577684 1.1227637167522928 1.2432638306505988 1.0 17.084288715957612 -11.530343121984581 1.8589909051976812 0.00011581605714987983 1.103296106465239 0.037815242684252515 0.155546693719423 2382130.1111991056 169919.3474357388 10006141.825722087 0.03947665881737885 2.9488784928134813e-12 11.530343121984581 1.103180290408089 GGCWPR ddPTM_KYSE-520_SHP099_60min_R1 2 GGCWPR 6 0 Q9Y4W6 Q9Y4W6 AFG3L2 AFG3-like protein 2 0 ; 128.65 0.05614500000000001 1155930000.0 1811710.0 1336530.0 1027290.0 1034180.0 1747250.0 1585130.0 1278030.0 1395230.0 1371380.0 1261890.0 False True 1711210.834745654 1272321.0926275698 1093510.7571221164 1132468.156262444 1884748.634507409 1575236.61569588 1407225.744770815 1390390.2727791285 1122371.9616765091 1250710.6363355645 1.3681908388972377 1.0172785420257728 0.874311551651927 0.9054597629236152 1.5069421973011292 1.2594732705809064 1.1251409429872774 1.1116802179381866 0.8973873964684008 1.0 20.25431661637225 -7.6710676849076735 5.545838754574072 0.9504435197657345 1.141669355008671 0.15301939440138568 0.18634299526165823 0.425849524450113 19.958625337641138 0.14552727737833984 0.051690888057324955 2.132712503447229e-08 7.6710676849076735 0.19122583524293646 GGDAKS(ph)PVLQEK ddPTM_KYSE-520_SHP099_60min_R1 5 GGDAKSPVLQEK 12 1 A6NFI3 A6NFI3 ZNF316 Zinc finger protein 316 1 GGDAKS(1)PVLQEK;GGDAKS(1)PVLQEK;GGDAKS(1)PVLQEK;GGDAKS(1)PVLQEK;GGDAKS(1)PVLQEK 170.22 3.4366000000000003e-06 2913100000.0 3099200.0 2933300.0 2734160.0 2539850.0 2788420.0 2630390.0 2685260.0 2738910.0 3565290.0 2555300.0 True False 2927281.197897972 2792379.8650269373 2910408.328410676 2781236.5803662557 3007852.790060464 2613972.760316369 2956712.2864121175 2729409.3604764007 2917923.2096469556 2532662.0299933203 1.155812012511473 1.1025473718790273 1.1491499039129007 1.0981475409782926 1.1876250184350088 1.032104848321694 1.1674326267764656 1.0776840052691907 1.1521170906702665 1.0 21.272223139393095 -13.791958694708534 0.3208607711509697 3.684518348068623e-12 1.12817501598177 0.40743362396532157 0.04494261633376149 264.86080758230025 2.680141840983356 178.9879080482176 0.03658614810541325 1.614512104072897e-14 13.791958694708534 1.1281750159780854 GGDLMAYDR ddPTM_KYSE-520_SHP099_60min_R1 5 GGDLMAYDR 9 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ;;;; 159.28 0.0011315 1528960000.0 3155300.0 3121760.0 2593130.0 2274170.0 2769830.0 3277050.0 2546850.0 2907830.0 2964510.0 3178500.0 False True 2980269.2190653896 2971785.9637427093 2760287.3089546957 2490306.433045858 2987799.862823098 3256596.7153900214 2804310.4528606925 2897743.416422625 2426229.713215612 3150340.9628355806 0.9460148137053992 0.9433220082526698 0.8761868450169906 0.7904879066818107 0.9484052355189575 1.0337283341098424 0.8901609336713094 0.9198189816934622 0.770148292466665 1.0 21.587076549927676 -10.291634521185742 3.1613205722997986 1.0005473269481928 0.904615597285483 0.13674042289387156 0.07358979144376646 27581127.680615425 38091407.25917218 144442.6396306283 0.01886190754709569 5.109347942720893e-11 10.291634521185742 -0.0959317296627098 GGDLMAYDRR ddPTM_KYSE-520_SHP099_60min_R1 6 GGDLMAYDRR 10 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ;;;;; 155.57 0.00026644 8429640000.0 5517610.0 5527750.0 3725620.0 2958890.0 5163500.0 4876360.0 3404370.0 3542010.0 4160920.0 3817500.0 False True 5211537.174217152 5262188.592678091 3965779.426402762 3240102.015977282 5569838.073703818 4845924.828446105 3748516.9430493903 3529723.594021345 3405401.8162573613 3783679.919970056 1.3773726331106773 1.39075944688253 1.0481276192184215 0.8563361818414398 1.4720690416508322 1.2807438607239419 0.9907066724288497 0.9328811286048951 0.9000237568415437 1.0 21.851358618518564 -6.839241468418165 5.282551479544766 0.943459121453161 1.2289588787536443 0.398851205448815 0.16956805266868424 0.24230502054316747 11.780027957779435 0.07851579459443948 0.05278869943323918 1.4479665579985362e-07 6.839241468418165 0.28549975730048327 GGDSGLDGLGGPGVQLGS(ph)PDKK ddPTM_KYSE-520_SHP099_60min_R1 2 GGDSGLDGLGGPGVQLGSPDKK 22 1 Q9Y3Y4-2 Q9Y3Y4-2 1 GGDSGLDGLGGPGVQLGS(1)PDKK;GGDSGLDGLGGPGVQLGS(1)PDKK 258.87 4.7753999999999996e-36 6305600000.0 3728100.0 3345000.0 3056100.0 2781100.0 3131500.0 3265100.0 3068900.0 3263800.0 3796800.0 3096500.0 True False 3521294.8612169046 3184301.17905264 3253101.09593289 3045414.9078317946 3377931.234202287 3244721.2997726537 3379134.3615777073 3252478.639576646 3107396.8295391244 3069067.4190405444 1.1473501166415354 1.0375468324016552 1.0599640385058333 0.9922932578600231 1.1006376768543913 1.0572336337880197 1.1010296941062625 1.0597612223824786 1.0124889437947122 1.0 21.549368907551877 -13.999999998673342 0.1454003526418933 0.7722320738136798 1.0836115136510533 0.22819619766865495 0.04103542868195184 236.0104878543901 2.0654228907247196 15.396433576432676 0.22959016240532937 1.0000000030547427e-14 13.999999998673342 0.3113794398373736 GGDVS(ph)PSPYSSSSWR ddPTM_KYSE-520_SHP099_60min_R1 9 GGDVSPSPYSSSSWR 15 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 GGDVS(0.696)PS(0.084)PY(0.118)S(0.041)S(0.041)S(0.01)S(0.01)WR;GGDVS(0.911)PS(0.089)PYSSSSWR;GGDVS(0.994)PS(0.006)PYSSSSWR;GGDVS(0.995)PS(0.005)PYSSSSWR;GGDVS(0.973)PS(0.027)PYSSSSWR;GGDVS(0.999)PS(0.001)PYSSSSWR;GGDVS(0.999)PS(0.001)PYSSSSWR;GGDVS(1)PSPYSSSSWR;GGDVS(0.997)PS(0.003)PYSSSSWR 324.84 2.7234999999999996e-43 13811200000.0 4656760.0 4619840.0 4219310.0 3848340.0 4087040.0 4176150.0 3870420.0 4070230.0 5087210.0 3963360.0 True False 4398440.239779082 4397895.951878785 4491293.473734697 4214085.076554394 4408666.795923398 4150085.098785808 4261679.825259075 4056111.3221288235 4163500.902128037 3928247.7138474216 1.1196952331377144 1.119556675709582 1.1433325494984672 1.07276459722725 1.1222985710352371 1.056472351312365 1.0848806225320962 1.0325497823955123 1.0598875644861516 1.0 21.905454477660847 -6.935198082404837 0.3270921511844718 0.9955790412700826 1.142900511682277 0.7644652609581529 0.020938189027184053 0.6772185539220043 0.20574956832624056 0.027962850527572875 0.035575079554742185 1.1609189960668265e-07 6.935198082404837 0.14732147041219446 GGDVSPS(ph)PYSSSSWR ddPTM_KYSE-520_SHP099_60min_R1 1 GGDVSPSPYSSSSWR 15 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 GGDVS(0.352)PS(0.648)PYSSSSWR 275.66 1.5879999999999999e-25 2215200000.0 457100.0 511420.0 491170.0 387590.0 368420.0 375510.0 349330.0 364030.0 495740.0 410970.0 True False 431743.7517937406 486850.6155429304 522831.6040997861 424426.43706681737 397412.5579769462 373166.30280163785 384643.68553225574 362767.26489524037 405726.1125884235 407329.12552982196 1.0599383268558613 1.1952266239485652 1.2835605689127374 1.0419741935093803 0.975654656317598 0.9161296833764397 0.9443068551308262 0.8905998666885925 0.9960645756933943 1.0 18.63583545046519 -5.530530863407471 3.430857614451572 0.9468084161095066 1.181105093544815 0.7330932224845335 0.06055348671900057 0.11550724237447221 2.8762035693938284 0.01841712324872173 0.026112140379493096 2.947603995851909e-06 5.530530863407471 0.23429667743530846 GGEKT(ph)PVS(ph)GSLKSPVPR ddPTM_KYSE-520_SHP099_60min_R1 2 GGEKTPVSGSLKSPVPR 17 2 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 2 GGEKT(1)PVS(0.459)GS(0.353)LKS(0.188)PVPR;GGEKT(0.998)PVS(0.473)GS(0.353)LKS(0.175)PVPR 78.987 0.033967000000000004 2618760000.0 2439910.0 2237990.0 2114220.0 2241450.0 2221680.0 2152040.0 2150840.0 2186600.0 2667120.0 1978600.0 True False 2304563.3284599995 2130473.6011085245 2250506.004071604 2454476.734083482 2396513.5763699617 2138608.3201012923 2368267.897375537 2179015.1949562747 2182838.2406237856 1961071.1433275058 1.1751553921443478 1.0863826171515532 1.147590189029548 1.2516000464515407 1.2220431596905792 1.0905307170409662 1.2076399703465668 1.111135209128092 1.113084677244289 1.0 20.903210443591625 -8.166891607449505 1.0066091076823775 1.000570516602693 1.167875819925257 0.4949633659777649 0.051014898317773304 0.6749554339720463 1.4293663085284336 0.051289542394680296 0.016851652187708295 6.809392884058075e-09 8.166891607449505 0.167305303322564 GGEKT(ph)PVSGS(ph)LKSPVPR ddPTM_KYSE-520_SHP099_60min_R1 1 GGEKTPVSGSLKSPVPR 17 2 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 2 GGEKT(0.997)PVS(0.087)GS(0.571)LKS(0.344)PVPR 81.12 0.024812999999999998 1549600000.0 687690.0 629310.0 613970.0 651850.0 654440.0 568660.0 631490.0 666000.0 767870.0 602190.0 True False 649542.4648239716 599077.0029864326 653547.4885867342 713801.6280141508 705940.7047457589 565110.7820062832 695327.1719484851 663689.801445569 628444.1644274686 596855.0650967311 1.088275031591969 1.003722742789058 1.0949852431608587 1.1959379584027932 1.1827673852970462 0.9468140844456047 1.1649849563323968 1.11197816732611 1.0529259131370827 1.0 19.18702111739801 -9.303225666313915 13.622016530143359 0.9999905291721095 1.094951911329489 0.12479188158168075 0.07428499401059621 0.0 0.0 0.07348798125795455 0.017823453467056338 4.974785200633705e-10 9.303225666313915 0.09496138215737948 GGEKT(ph)PVSGSLK ddPTM_KYSE-520_SHP099_60min_R1 2 GGEKTPVSGSLK 12 1 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 GGEKT(0.698)PVS(0.298)GS(0.005)LK;GGEKT(0.807)PVS(0.153)GS(0.04)LK 120.66 0.00039959 1081440000.0 984540.0 1022380.0 762020.0 740040.0 885640.0 954030.0 811330.0 1033060.0 1060530.0 948260.0 True False 929925.6035681674 973263.3301763334 811141.0284751082 810373.1790988606 955334.8293977069 948075.5448905405 893347.1542177452 1029476.5559780167 867964.4857856954 939859.1541351158 0.9894308093683575 1.0355416829151993 0.8630453030183469 0.8622283195662315 1.0164659515146526 1.0087421511183616 0.9505117338989242 1.0953519486921095 0.9235048485370344 1.0 19.842085047338276 -5.847016189370115 24.99999774426309 1.0019172914645442 0.9391953236679005 0.1793543810660343 0.0642745981918786 43.37528452343515 12664.640289468929 0.020655173905783662 0.023420772102361237 1.4222757673886558e-06 5.847016189370115 -0.06272196779664374 GGEKT(ph)PVSGSLKS(ph)PVPR ddPTM_KYSE-520_SHP099_60min_R1 2 GGEKTPVSGSLKSPVPR 17 2 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 2 GGEKT(1)PVS(0.002)GS(0.01)LKS(0.989)PVPR;GGEKT(1)PVS(0.002)GS(0.002)LKS(0.996)PVPR 105.51 0.0013407 3085650000.0 3026900.0 2754900.0 2646400.0 2816400.0 2746700.0 2603000.0 2629800.0 2869300.0 3310500.0 2557100.0 True False 2858991.8230244434 2622550.468810797 2816991.178389711 3084069.809218466 2962849.6634147945 2586753.7114661764 2895645.8483746755 2859347.067999652 2709396.6509137414 2534446.083393698 1.1280539135384442 1.0347627775530046 1.1114819908173688 1.216861478895146 1.1690324299372947 1.02063868251734 1.1425162552668393 1.1281940802508224 1.069029113961572 1.0 21.273239042366612 -8.037853584684775 3.295223346327273 1.000191325651192 1.1181516923340133 0.3161696012846278 0.054486820217218304 0.32469283033880514 9.07754226122889 0.05542447362659946 0.014724014520102371 9.165294310204822e-09 8.037853584684775 0.11796036668282128 GGEKTPVS(ph)GSLK ddPTM_KYSE-520_SHP099_60min_R1 2 GGEKTPVSGSLK 12 1 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 GGEKT(0.327)PVS(0.673)GSLK;GGEKT(0.376)PVS(0.622)GS(0.002)LK 126.1 0.00014457 3092500000.0 1887020.0 1902580.0 1582140.0 1445150.0 1405850.0 1690450.0 1493910.0 1669850.0 1936120.0 1767280.0 True False 1782343.2389188919 1811177.200969196 1684127.2759135044 1582496.6214998108 1516482.3968076932 1679899.2745094092 1644929.0019565788 1664057.6800959192 1584569.413613382 1751623.2741230344 1.0175379976103809 1.0339992781130278 0.961466601176944 0.9034457607855786 0.8657583050025032 0.9590528393443879 0.9390883452265881 0.9500088887144094 0.9046291157593294 1.0 20.74026109369461 -4.903360489919984 3.8283729483516997 0.9284515051504587 1.0255883020646597 0.5323597601338219 0.03463364248448831 0.16035011316216466 4.44249287744608 0.009300840397960856 0.02126850487800405 1.2492216724060264e-05 4.903360489919984 0.09713679691420096 GGET(ph)PGSEQWK ddPTM_KYSE-520_SHP099_60min_R1 5 GGETPGSEQWK 11 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 GGET(0.983)PGS(0.017)EQWK;GGET(0.984)PGS(0.016)EQWK;GGET(0.982)PGS(0.018)EQWK;GGET(1)PGSEQWK;GGET(1)PGSEQWK 252.22 4.1217000000000004e-14 3460870000.0 6428610.0 6208650.0 4854420.0 4812760.0 4536440.0 6530760.0 5314950.0 6854100.0 6994800.0 6861000.0 True False 6072002.188183675 5910377.134626356 5167343.680546629 5270163.263390945 4893432.019187171 6489999.104377581 5852237.014913294 6830324.726858961 5724720.644558655 6800216.8777772235 0.8929130198812748 0.8691453876921454 0.7598792470036149 0.7749992916569443 0.719599405009959 0.9543811941625834 0.8605956427710592 1.004427483655724 0.8418438334322487 1.0 22.69714932796718 -6.278572827355734 24.962856429211303 0.9280479808194123 0.8029796070220512 0.4755358807560178 0.06763436005110135 770.731697870269 1122926.4396391017 0.024045104462536805 0.021257598648086195 5.265349122276375e-07 6.278572827355734 -0.12506837379736113 GGFDS(ph)PFYR ddPTM_KYSE-520_SHP099_60min_R1 8 GGFDSPFYR 9 0 A0A2R8Y6S1;A0A2R8YFV7;A0A2R8Y5N2;A0A2R8Y5S3;Q92574-2;Q92574;A0A2R8YEH9 A0A2R8Y6S1 TSC1 Hamartin 1 GGFDS(0.967)PFY(0.033)R;GGFDS(1)PFYR;GGFDS(1)PFYR;GGFDS(1)PFYR;GGFDS(1)PFYR;GGFDS(1)PFYR;GGFDS(1)PFYR;GGFDS(1)PFYR 187.33 5.7489999999999995e-06 7229170000.0 6487530.0 6235130.0 5857160.0 5232010.0 5800040.0 5620410.0 4942600.0 5014010.0 6621690.0 5279720.0 True False 6127653.7783295745 5935584.995679059 6234721.905387348 5729258.65733883 6256470.150286654 5585330.936404769 5442246.243127488 4996617.569588734 5419358.015220966 5232945.7883600015 1.1709759714995964 1.1342722121987172 1.19143636443849 1.0948438774356903 1.1955923877910883 1.0673397283856068 1.0399966793527744 0.9548383972757851 1.0356228087200166 1.0 22.319191882496312 -6.592413930341103 2.147118888929289 0.9988918487024149 1.154793205922553 0.8016048803461797 0.03515577042590283 0.12530123343019312 1.1722209142688764 0.014717709716233868 0.010799397943413188 2.556148435302421e-07 6.592413930341103 0.1559013572201381 GGFHEDQWEK ddPTM_KYSE-520_SHP099_60min_R1 2 GGFHEDQWEK 10 0 O95801 O95801 TTC4 Tetratricopeptide repeat protein 4 0 ; 143.5 4.8711e-05 315610000.0 1139990.0 972270.0 854070.0 856610.0 1087430.0 1132540.0 964680.0 1064090.0 1125000.0 940520.0 False True 1076752.4821862767 925560.6897929771 909124.7187603166 938021.9568508131 1173004.5543696608 1125471.3977656167 1062199.268769519 1060398.9201504737 920728.3589421402 932187.7245134877 1.1550811643097294 0.9928908796519829 0.9752592689791021 1.0062586453177877 1.2583351223401449 1.2073441520086574 1.1394692730199647 1.1375379575008886 0.9877070194446852 1.0 19.83026098935173 -3.8943634078044322 19.15234998076592 1.0878406582461801 8.248813424390672 0.04529546487337732 0.0972487347760255 1460.131503901778 264806.2611633251 0.02574623615815051 134.0009638928874 0.00012753711604266871 3.8943634078044322 7.160972766144492 GGGDRYEDRYDR ddPTM_KYSE-520_SHP099_60min_R1 7 GGGDRYEDRYDR 12 2 E7EX17;P23588-2;P23588;F8VX11;F8VP89 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ;;;;;; 196.57 3.5554e-08 7647850000.0 5821970.0 8020460.0 6362330.0 4143420.0 6395120.0 6290930.0 4068440.0 4457740.0 7340740.0 4078550.0 False True 5499013.718290533 7635145.062644099 6772455.971887935 4537209.391035352 6898379.560744614 6251665.972367999 4479717.619348037 4442277.140384336 6007846.660996387 4042417.220063883 1.3603280955258823 1.8887573070756511 1.6753480908091196 1.122400075013447 1.7064986579083488 1.5465167576812378 1.108177947865867 1.0989160441766905 1.486201530900228 1.0 21.94678680006056 -6.761234148442303 0.37723594917355213 1.030622986443919 1.6876584602948572 0.33904327294567305 0.23730219206475045 1.5272354903892456 0.5298119090746509 0.28458445355342377 0.3547750824910932 1.732869474973199e-07 6.761234148442303 0.6570354738509383 GGGEYGETWHK ddPTM_KYSE-520_SHP099_60min_R1 2 GGGEYGETWHK 11 0 P48147;A0A499FJL1 P48147 PREP Prolyl endopeptidase 0 ; 128.81 0.00027285 421980000.0 547670.0 505370.0 514800.0 389330.0 519240.0 493630.0 421580.0 446600.0 500240.0 558740.0 False True 517289.65334692184 481091.2666241654 547984.8317091231 426331.80614366714 560101.2339285314 490549.07206724846 464197.4206243045 445050.8488372236 409409.0260241922 553789.9982931416 0.9340899166494178 0.8687250909315013 0.9895173863704457 0.7698438170744895 1.011396442071619 0.8858034156976281 0.8382192203814189 0.8036455158253719 0.7392856990665202 1.0 19.0789794726285 -6.705456171890022 3.9834048684360894 0.8280080641015353 0.9114523075715616 0.10875988425193117 0.08759483985602415 0.39877285384453537 12.856869818642762 0.03400399533767411 0.024904122523315878 1.9703520410777e-07 6.705456171890022 0.08344424347002632 GGGFGDRDR ddPTM_KYSE-520_SHP099_60min_R1 4 GGGFGDRDR 9 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 ;;; 113.66 0.00096702 1241960000.0 2312680.0 2492700.0 1809010.0 1233100.0 2127890.0 2127220.0 1287140.0 1624350.0 2239770.0 1745950.0 False True 2184391.0301867183 2372946.9503810215 1925621.6791183408 1350293.4532549654 2295342.836962068 2113943.230927808 1417256.6724758463 1618715.508976142 1833084.228006965 1730482.2413285456 1.2623019052248075 1.3712633933528469 1.1127659291319745 0.780298936912697 1.3264180250702031 1.2215919819580856 0.8189952133734546 0.9354129561788529 1.0592909792588503 1.0 20.722742705581247 -3.2750645215218506 0.4148765892012 0.9851253541320815 2.022713646276397 0.26813241847894476 0.16781838850749814 16.751879510266285 1.2050905590452876 0.1310110026520327 10.164893221396369 0.0005308055785548952 3.2750645215218506 1.0375882921443154 GGGGGQDNGLEGLGNDS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 5 GGGGGQDNGLEGLGNDSR 18 0 P08621;P08621-2;P08621-4 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R;GGGGGQDNGLEGLGNDS(1)R 263.19 9.542799999999999e-30 4802640000.0 5862360.0 5756190.0 5885150.0 5542450.0 5790690.0 5179930.0 5585700.0 6169080.0 7181040.0 5264290.0 True False 5537163.204475065 5479653.992182667 6264516.185572925 6069202.781601652 6246384.358480875 5147600.135472531 6150357.067178655 6147680.901354089 5877144.155286996 5217652.486155643 1.0612364888553236 1.0502144415946082 1.2006388317725256 1.1632056365780368 1.197163738875833 0.9865739715573265 1.178759429359817 1.178246523252776 1.126396242540343 1.0 22.314969428160342 -8.852099415360614 7.06567293716464 0.9999999999999748 1.1288855437972196 0.23561274928342923 0.06851024911983847 3606399.1982541275 30019415.775540773 0.06775108967311583 0.018089467868367657 1.405725699355014e-09 8.852099415360614 0.12888554379724482 GGGGYTCQS(ph)GSGWDEFTK ddPTM_KYSE-520_SHP099_60min_R1 10 GGGGYTCQSGSGWDEFTK 18 0 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 GGGGYT(0.011)CQS(0.977)GS(0.011)GWDEFTK;GGGGY(0.006)T(0.071)CQS(0.714)GS(0.208)GWDEFTK;GGGGYTCQS(0.991)GS(0.009)GWDEFTK;GGGGYTCQS(0.999)GS(0.001)GWDEFTK;GGGGYTCQS(0.935)GS(0.065)GWDEFTK;GGGGYTCQS(0.998)GS(0.002)GWDEFTK;GGGGYTCQS(0.982)GS(0.018)GWDEFTK;GGGGYTCQS(0.976)GS(0.024)GWDEFTK;GGGGYTCQS(0.998)GS(0.002)GWDEFTK;GGGGYTCQS(0.998)GS(0.002)GWDEFTK 344.14 2.729e-59 23811770000.0 18508240.0 13212020.0 11760950.0 11277730.0 10611490.0 11237540.0 10077690.0 11047730.0 13707880.0 10675860.0 True False 17481551.031938285 12577294.72755366 12519079.655185325 12349562.068426829 11446553.891880967 11167402.344506178 11096441.253976332 11009408.003189567 11218874.539534038 10581280.186093403 1.6521206058708908 1.1886363943073304 1.183134690227625 1.1671141725041376 1.0817740094364727 1.055392367284924 1.0486860813458079 1.0404608714226127 1.0602568254717044 1.0 23.335010848033825 -1.0000000000110894 0.7745707971204875 1.0571809858747947 122.26648759892764 0.9398795034089282 0.04395632181760772 96.99899713254231 0.3760244931945394 0.01632764792455464 20575.23426032896 0.09999999999744658 1.0000000000110894 121.20930661305285 GGGHVRPS(ph)TPK ddPTM_KYSE-520_SHP099_60min_R1 2 GGGHVRPSTPK 11 1 Q5T8A7 Q5T8A7 PPP1R26 Protein phosphatase 1 regulatory subunit 26 1 GGGHVRPS(0.584)T(0.416)PK;GGGHVRPS(0.649)T(0.351)PK 70.622 0.023829 229150000.0 251950.0 347560.0 379810.0 320930.0 278240.0 255770.0 274480.0 240661.0 303800.0 254596.0 True False 237973.8312501268 330862.69590180437 404293.16031748673 351431.0907088772 300135.90503095824 254173.64455693576 302227.1170666519 239826.20316169964 248637.57817477526 252340.47751269065 0.9430664219859799 1.3111756748782593 1.6021732395158605 1.392686160274081 1.189408484874821 1.0072646571105617 1.1976957484018882 0.9504071860593128 0.9853257813632806 1.0 17.945012119605234 -6.026948746284318 3.551606191229679 1.0369562003140613 1.3316287241429552 0.39888686132730156 0.16358687597722388 0.2551061635715699 6.761740859089186 0.05847051844530503 0.06209012225649241 9.398342195344248e-07 6.026948746284318 0.29467252382889386 GGGPGKS(ph)PTQGST ddPTM_KYSE-520_SHP099_60min_R1 5 GGGPGKSPTQGST 13 1 Q6P582 Q6P582 MZT2A Mitotic-spindle organizing protein 2A 1 GGGPGKS(1)PTQGST;GGGPGKS(0.99)PT(0.007)QGS(0.001)T(0.001);GGGPGKS(0.982)PT(0.018)QGST;GGGPGKS(0.49)PT(0.49)QGS(0.01)T(0.01);GGGPGKS(0.617)PT(0.382)QGST 139.61 1.9489e-05 3434250000.0 5239350.0 6083330.0 4969310.0 3580610.0 3908080.0 5584870.0 4228700.0 5015830.0 6323000.0 5725290.0 True False 4948712.811114718 5791077.695535511 5289639.67377712 3920910.097850347 4215623.66206651 5550012.754727656 4656178.264134914 4998431.25643352 5174902.589858801 5674568.384808212 0.872086205598168 1.0205318365779528 0.932165993089164 0.6909618198182778 0.7428976754165928 0.9780502019476913 0.8205343469999054 0.8808478314959025 0.9119464669265241 1.0 22.436079232603948 -9.17250100902461 12.414181063244913 1.000001917559643 0.8710604952637392 0.13931243252907544 0.09523917299963316 0.0 0.0 0.09881985463932927 0.0239673352109493 6.722007473420447e-10 9.17250100902461 -0.12894142229590388 GGGPGKS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 7 GGGPGKSPTR 10 1 H7BZ50;H7C173;A0A494C0V9;B8ZZ87;Q6NZ67 H7BZ50 MZT2B Mitotic-spindle organizing protein 2B 1 GGGPGKS(0.5)PT(0.5)R;GGGPGKS(0.866)PT(0.134)R;GGGPGKS(0.5)PT(0.5)R;GGGPGKS(0.944)PT(0.056)R;GGGPGKS(0.5)PT(0.5)R;GGGPGKS(0.5)PT(0.5)R;GGGPGKS(0.5)PT(0.5)R 93.772 0.0034265 45531970000.0 7471460.0 5469340.0 5060110.0 5679230.0 5757070.0 6893230.0 7098930.0 4812820.0 7086870.0 7530900.0 True False 7057003.219813739 5206584.696753288 5386292.787062259 6218982.311677239 6210118.655752504 6850206.794656164 7816559.123280263 4796125.450740634 5800073.053454473 7464182.0849515395 0.9454489640655056 0.6975425622654932 0.7216186215394595 0.8331766616753984 0.831989169754133 0.9177437951931525 1.0472090624690342 0.6425520433658838 0.7770540680067197 1.0 22.831552749759886 -5.590768253660482 3.0163712073049584 0.8633141072343816 0.7792103371125505 0.07617541566011454 0.1227295635623259 0.7264483456626283 13.38535588596057 0.03939918039798628 0.05435913587555979 2.565852850554511e-06 5.590768253660482 -0.08410377012183112 GGGPGKS(ph)PTRGST(ph) ddPTM_KYSE-520_SHP099_60min_R1 1 GGGPGKSPTRGST 13 2 H7BZ50;H7C173;A0A494C0V9;B8ZZ87;Q6NZ67 H7BZ50 MZT2B Mitotic-spindle organizing protein 2B 2 GGGPGKS(0.979)PT(0.062)RGS(0.253)T(0.705) 84.859 0.0039561 0.0 692270.0 624770.0 591790.0 575960.0 593940.0 590860.0 536140.0 570240.0 720070.0 580560.0 True False 653868.4030939688 594755.1114011112 629937.7302974781 630699.0652313111 640679.6989436719 587172.2235716116 590338.2634221613 568261.9705350172 589323.4394875261 575416.6900688455 1.13633895988616 1.0336076823387796 1.094750536732102 1.0960736386632293 1.1134186929249792 1.020429601201452 1.0259317701603867 0.9875660201427728 1.024168137036513 1.0 19.134247541760708 -6.341542158945174 5.477179932482158 1.0106606936979727 1.0913841158734916 0.7120128027014166 0.026445837498754413 0.1294484249375106 6.669205918596876 0.009263927391168738 0.008159933552539961 4.554679696674707e-07 6.341542158945174 0.08072342217551887 GGGPGKSPT(ph)QGST ddPTM_KYSE-520_SHP099_60min_R1 1 GGGPGKSPTQGST 13 1 Q6P582 Q6P582 MZT2A Mitotic-spindle organizing protein 2A 1 GGGPGKS(0.107)PT(0.807)QGS(0.043)T(0.043) 89.507 0.006056499999999999 0.0 285670.0 312740.0 237100.0 181590.0 206930.0 281920.0 213490.0 273010.0 334400.0 301470.0 True False 269823.31563097326 297715.50096768956 252383.84537341306 198848.25900297592 223214.21372935656 280160.43270708586 235071.65266161293 272062.9920310133 273681.3895380018 298799.21034011064 0.9030255311713999 0.9963731183519945 0.8446603492898629 0.665491246702544 0.7470374954314007 0.9376210612745293 0.7867211308692573 0.9105211212617844 0.915937459227157 1.0 18.18881680984672 -7.8718125657013855 1.3307729584344048 0.9968522591727605 0.839272930159684 0.23209814695230335 0.09056097723259657 0.6822778950882434 2.636937872404555 0.09470857347980531 0.029325886624736123 1.3433446013071532e-08 7.8718125657013855 -0.15757932901307659 GGGPGKSPT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 GGGPGKSPTR 10 1 H7BZ50;H7C173;A0A494C0V9;B8ZZ87;Q6NZ67 H7BZ50 MZT2B Mitotic-spindle organizing protein 2B 1 GGGPGKS(0.179)PT(0.821)R 85.522 0.014053 712300000.0 398010.0 288340.0 283500.0 334970.0 297580.0 347320.0 404040.0 282120.0 404580.0 436350.0 True False 375931.5918867355 274487.7135928366 301774.8636160379 366805.448087597 320997.8530014111 345152.2470481875 444884.306250401 281141.3915673027 331118.4706318318 432484.2784751628 0.8692375898892356 0.634676743766537 0.697770713608422 0.8481359123177059 0.7422185475346608 0.798068887648616 1.0286716266749807 0.6500615295393875 0.7656196701514264 1.0 18.72228816376845 -5.261305095138217 24.9990882226978 0.8215562136505501 0.723973186975263 0.11871883731777422 0.12024686151372711 26.66753739970869 4964167.776684678 0.03291557110417598 0.05269418139378596 5.47891931491761e-06 5.261305095138217 -0.09758302667528707 GGGPLILLDLNDENS(ph)NQS(ph)FHSEGSLQK ddPTM_KYSE-520_SHP099_60min_R1 3 GGGPLILLDLNDENSNQSFHSEGSLQK 27 0 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 2 GGGPLILLDLNDENS(0.994)NQS(0.968)FHS(0.038)EGS(0.001)LQK;GGGPLILLDLNDENS(0.998)NQS(0.998)FHS(0.004)EGSLQK;GGGPLILLDLNDENS(1)NQS(1)FHS(0.001)EGSLQK 131.19 4.1476999999999996e-05 277435000.0 531040.0 602020.0 590560.0 667360.0 538720.0 422546.0 447490.0 578980.0 735760.0 458001.0 True False 501582.1525980052 573098.0555495566 628628.4425294091 730785.6937508999 581114.1991024929 419908.73367851943 492726.6562815361 576971.6535149483 602164.5310002399 453943.4674593861 1.1049440922792468 1.2624877250840296 1.3848165853067418 1.6098605798667707 1.2801466278496114 0.9250242899818539 1.0854361646378794 1.2710209417576197 1.3265187719748714 1.0 18.792153114917028 -6.012665364872203 24.93669092672926 1.1325349058730618 1.351477396016864 0.29807740556026796 0.16006991393646844 827.4278749516933 1629114.8191760525 0.05563035341784708 0.058383277525382596 9.712580584443842e-07 6.012665364872203 0.21894249014380218 GGGPLILLDLNDENSNQS(ph)FHSEGSLQK ddPTM_KYSE-520_SHP099_60min_R1 1 GGGPLILLDLNDENSNQSFHSEGSLQK 27 0 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 1 GGGPLILLDLNDENS(0.301)NQS(0.686)FHS(0.012)EGS(0.002)LQK 67.235 0.019444 132110000.0 57841.0 59429.0 52848.0 55521.0 40779.0 58836.0 46719.0 63947.0 82659.0 66953.0 True False 54632.44442682511 56573.941635252355 56254.66663978971 60797.69914700268 43988.07529922887 58468.78269989391 51441.81245350085 63725.182782342024 67650.20926382073 66359.84850864581 0.8232756049722932 0.8525327122752777 0.8477214445789532 0.9161820063389919 0.662871846271587 0.8810867416654244 0.7751948446175048 0.96029729142675 1.0194449020631324 1.0 16.018022972352043 -7.4064143106614715 4.415860487413103 1.0046462578892719 0.8248530420371009 0.5971530210677176 0.06484182526124437 0.15728579788620017 4.914983080290189 0.03789079434710904 0.016883553787277954 3.9227053641778525e-08 7.4064143106614715 -0.179793215852171 GGGPQAQSHGEARLS(ph)DPPGR ddPTM_KYSE-520_SHP099_60min_R1 2 GGGPQAQSHGEARLSDPPGR 20 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 GGGPQAQS(0.001)HGEARLS(0.999)DPPGR;GGGPQAQS(0.001)HGEARLS(0.999)DPPGR 65.833 0.012056 99359000.0 190647.0 199811.0 196984.0 154185.0 166183.0 157277.0 142539.0 143820.0 223550.0 149968.0 True False 180071.43086462768 190211.77963757457 209681.90382554362 168838.69604258935 179260.65664807244 156295.37590405907 156948.23316658218 143321.12198784042 182958.95523690243 148639.4001933383 1.2114649993905053 1.2796861356421125 1.4106751208145758 1.1358946270166417 1.2060103607448929 1.0515070412068568 1.0558992633341926 0.9642202659686443 1.2308913719977608 1.0 17.181457059554177 -5.850714290101164 1.471755598255609 1.057722852206624 1.290872780572043 0.5403559111382155 0.08937480982778921 0.29615527220364657 1.333990710315863 0.03381247896836422 0.042976998395700655 1.4102162341851024e-06 5.850714290101164 0.23314992836541903 GGGQLDLLGVSLAS(ph)LKK ddPTM_KYSE-520_SHP099_60min_R1 2 GGGQLDLLGVSLASLKK 17 1 E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2;F8WCC1;H0Y7D3 E7EXA6 CHTF18 Chromosome transmission fidelity protein 18 homolog 1 GGGQLDLLGVS(0.001)LAS(0.999)LKK;GGGQLDLLGVSLAS(1)LKK 179.5 5.032399999999999e-09 3536400000.0 1289790.0 1424190.0 1321420.0 994730.0 1075110.0 1443720.0 1012520.0 1315470.0 1688990.0 1545090.0 True False 1218242.7775673787 1355769.7746472284 1406600.8475467549 1089268.8401235198 1159715.0404608718 1434709.2079592592 1114875.4028429259 1310906.9416030068 1382311.9919730541 1531401.704661831 0.7955083071011697 0.8853129590492481 0.9185054732960252 0.7112887734208547 0.7572898978305393 0.9368601351244259 0.7280097700355611 0.8560176847213876 0.902644934875726 1.0 20.54642133766622 -7.991210816906934 2.1125391363955477 0.9984436541802951 0.8222723903003794 0.37091055645234294 0.07289748643914275 0.3492659431113036 3.5809639365791197 0.07053134592940792 0.019640796837107805 1.0204440155810196e-08 7.991210816906934 -0.17617126387991577 GGGQSVQFTDIETLKQES(ph)PNGSR ddPTM_KYSE-520_SHP099_60min_R1 6 GGGQSVQFTDIETLKQESPNGSR 23 1 Q02241-2;Q02241-3;Q02241;A0A2U3TZL8 Q02241-2 KIF23 Kinesin-like protein KIF23 1 GGGQSVQFTDIET(0.021)LKQES(0.809)PNGS(0.17)R;GGGQSVQFTDIETLKQES(1)PNGSR;GGGQSVQFTDIET(0.001)LKQES(0.984)PNGS(0.015)R;GGGQSVQFTDIETLKQES(0.866)PNGS(0.133)R;GGGQSVQFTDIETLKQES(1)PNGSR;GGGQSVQFTDIETLKQES(0.991)PNGS(0.009)R 188.73 3.4113e-15 32315700000.0 12585700.0 13818200.0 12204100.0 9989340.0 10330100.0 11154700.0 9927210.0 11189000.0 16336200.0 12796700.0 True False 11887546.13202906 13154352.930458939 12990795.81325039 10938723.870195415 11143020.099771073 11085079.379674131 10930749.267033076 11150187.97053224 13369957.88208941 12683331.193681944 0.9372574089960455 1.0371370682972962 1.024241629811071 0.8624488080579662 0.8785562664579666 0.8739880091750688 0.861820061316234 0.8791214074805977 1.054136147509063 1.0 23.596430373839592 -5.25345868838508 24.545464839616454 0.9051540764391285 1.0033045449407507 0.24385245356181073 0.06572266007016984 571.1050503977234 1756489.1918755174 0.01782694503846901 0.030145077028705097 5.578806671837831e-06 5.25345868838508 0.09815046850162223 GGGSCSGSAGGGGS(ph)GSLPSQR ddPTM_KYSE-520_SHP099_60min_R1 1 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGSCSGSAGGGGS(1)GSLPSQR 221.81 3.4338000000000003e-19 30542000.0 33542.0 36639.0 29657.0 25058.0 24251.0 32441.0 27146.0 33530.0 34116.0 33371.0 True False 31681.358395680723 34878.807443739795 31568.73767287776 27439.50478603759 26159.415730684876 32238.523685622044 29890.182599429216 33413.69225596084 27921.39439437338 33075.358902245134 0.9578538055872831 1.0545254413360952 0.9544488320196246 0.8296056549873149 0.7909034580093155 0.9746991342075418 0.903699418282058 1.0102291665138285 0.8441750995626564 1.0 15.013469190888774 -4.99943738411633 24.719251841946743 0.904750824058055 1.0057640371312555 0.23081065474058704 0.07214046035852781 23.584095470602254 1035940.4785053186 0.019117612882308274 0.039213770366880306 1.001296310431777e-05 4.99943738411633 0.10101321307320055 GGGSCSGSAGGGGSGS(ph)LPSQR ddPTM_KYSE-520_SHP099_60min_R1 1 GGGSCSGSAGGGGSGSLPSQR 21 0 O15234 O15234 CASC3 Protein CASC3 1 GGGSCSGSAGGGGS(0.226)GS(0.774)LPSQR 361.7 3.6435999999999997e-73 0.0 287120.0 278600.0 261040.0 211180.0 229190.0 302800.0 269770.0 259000.0 342860.0 266600.0 True False 271192.8812404704 265215.6378128746 277867.05607876746 231250.48370641778 247225.94908728206 300910.11288204335 297040.9843014818 258101.58945105426 280605.2667972464 264238.13141166116 1.0263200083638735 1.003699338910668 1.0515781904537977 0.8751593968326572 0.9356179888440267 1.138783835907658 1.124141253628215 0.9767764707999441 1.061940853495087 1.0 18.01147914703596 -6.246977623370374 24.999814830161785 1.0628653147293776 0.9781978730458559 0.28635187109692206 0.06454709152528651 1137.9904919668525 1967226.9523924987 0.02275578108552428 0.022664824990626144 5.662684647561191e-07 6.246977623370374 -0.0846674416835217 GGGSGGGEES(ph)EGEEVDED ddPTM_KYSE-520_SHP099_60min_R1 2 GGGSGGGEESEGEEVDED 18 0 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 GGGSGGGEES(1)EGEEVDED;GGGSGGGEES(1)EGEEVDED 172.82 1.3644000000000001e-08 81699000.0 161916.0 190193.0 123348.0 122763.0 130950.0 185556.0 151949.0 188673.0 177183.0 186439.0 True False 152934.19670845623 181055.8427944869 131299.20944377803 134430.35860995823 141255.01999642016 184397.87617549664 167309.4877993322 188018.53739960917 145011.03361995146 184787.29550734718 0.8276228963066108 0.9798067680864353 0.7105424054358626 0.7274870182004112 0.7644195430675798 0.9978926076558382 0.905416616115148 1.0174862773081361 0.7847456894794252 1.0 17.495506046458097 -6.256401459470596 24.909094918583932 0.9399704050202868 0.8026373355685845 0.3604307848503744 0.09266005665201761 487.4161710902138 2409944.851545887 0.03188941277568367 0.030955319198311824 5.541132568403499e-07 6.256401459470596 -0.13733306945170232 GGGT(ph)PDANSLAPPGK ddPTM_KYSE-520_SHP099_60min_R1 7 GGGTPDANSLAPPGK 15 0 Q9BRQ0;Q5T171 Q9BRQ0 PYGO2 Pygopus homolog 2 1 GGGT(1)PDANSLAPPGK;GGGT(1)PDANSLAPPGK;GGGT(1)PDANSLAPPGK;GGGT(1)PDANSLAPPGK;GGGT(0.999)PDANS(0.001)LAPPGK;GGGT(1)PDANSLAPPGK;GGGT(0.998)PDANS(0.002)LAPPGK 230.96 1.3959e-14 5302670000.0 6148510.0 7237310.0 4964260.0 4015800.0 4594110.0 6528630.0 4479280.0 5762340.0 6699090.0 5992020.0 True False 5807439.89354919 6889618.76417621 5284264.14269684 4397460.424605706 4955640.320089756 6487882.398497673 4932089.335960047 5742351.787480267 5482704.126316187 5938935.364521014 0.9778587469132308 1.1600764011230944 0.8897662322214928 0.7404459140734173 0.8344324387994813 1.0924318922977423 0.8304669159095706 0.9668991890002491 0.9231796256059065 1.0 22.501772900689073 -4.779085347084986 24.959975104882048 0.9034836476630601 1.0689675760226198 0.281305069900179 0.10143813546732092 255.06641399401482 360788.5165193668 0.027008423518167967 0.05642016557897092 1.6630857904213925e-05 4.779085347084986 0.16548392835955972 GGGTSSGGSSTNS(ph)LTGSRPPK ddPTM_KYSE-520_SHP099_60min_R1 1 GGGTSSGGSSTNSLTGSRPPK 21 1 Q5T9C2-3;Q5T9C2-2;Q5T9C2 Q5T9C2-3 FAM102A Protein FAM102A 1 GGGTSSGGSST(0.007)NS(0.99)LT(0.002)GS(0.001)RPPK 145.2 8.2786e-07 552340000.0 85450.0 83968.0 71342.0 61304.0 68815.0 80825.0 60546.0 82656.0 98349.0 84286.0 True False 80709.9181596481 79934.05124146235 75940.81947123594 67130.31372828034 74230.3489962097 80320.54119448847 66666.58055201656 82369.2856280554 80491.30077653386 83539.29161351576 0.9661312252088826 0.956843776115165 0.90904313412863 0.8035777229097233 0.8885680924806887 0.9614702212951668 0.7980266442818462 0.985994542653375 0.9635142843791032 1.0 16.350167289509326 GGHERPPS(ph)PGLR ddPTM_KYSE-520_SHP099_60min_R1 4 GGHERPPSPGLR 12 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 GGHERPPS(1)PGLR;GGHERPPS(1)PGLR;GGHERPPS(1)PGLR;GGHERPPS(1)PGLR 112.24 0.00011314 4027760000.0 794030.0 728200.0 712930.0 737040.0 781960.0 752140.0 732940.0 843400.0 815050.0 735480.0 True False 749983.5730404382 693216.1789495165 758886.6085283314 807088.0600008434 843495.8032562106 747445.6152678331 807032.7280050704 840474.4422510407 667057.4657384808 728964.2193947823 1.0288345478233583 0.9509605005373989 1.0410478159797636 1.107171022290947 1.1571155082982227 1.0253529533841796 1.1070951173366286 1.1529707767396855 0.9150757307296932 1.0 19.475488477235167 -4.976274183882268 6.613387270255672 1.07643409695347 0.9905909232586024 0.14031982324337777 0.07195933566608803 0.2613082224822197 41.69660549606092 0.018348281321636375 0.037771540280820366 1.056150517366498e-05 4.976274183882268 -0.0858431736948676 GGHMIAVS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 6 GGHMIAVSPQK 11 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 GGHMIAVS(1)PQK;GGHMIAVS(1)PQK;GGHMIAVS(1)PQK;GGHMIAVS(1)PQK;GGHMIAVS(1)PQK;GGHMIAVS(1)PQK 125.36 0.00016322 4690680000.0 8354640.0 7561580.0 6629330.0 6288370.0 6562270.0 7483660.0 6346550.0 6724950.0 7737900.0 6877420.0 True False 7891191.464638072 7198310.346637028 7056667.219103034 6886014.794132628 7078683.314791205 7436951.702017281 6988121.210359077 6701622.718065122 6332892.416585238 6816491.409351787 1.1576617633247313 1.0560139981635437 1.0352345210061795 1.0101992917772125 1.038464349134176 1.0910234100514324 1.025178613263097 0.9831484139877192 0.929054558463452 1.0 22.700597914318614 -1.0000000000000002 0.5029437798717264 1.0038092879740252 5.544294833694555 0.5726056851580892 0.03836039640840468 94.16587577434048 0.994724994866734 0.023342540204400856 452.29535554976513 0.09999999999999995 1.0000000000000002 4.5404855457205295 GGIDNPAITS(ph)DQELDDKK ddPTM_KYSE-520_SHP099_60min_R1 9 GGIDNPAITSDQELDDKK 18 1 H0YK04;A0A0A0MSK6;Q13017-2;Q13017 H0YK04 ARHGAP5 Rho GTPase-activating protein 5 1 GGIDNPAIT(0.18)S(0.82)DQELDDKK;GGIDNPAIT(0.385)S(0.615)DQELDDKK;GGIDNPAIT(0.107)S(0.893)DQELDDKK;GGIDNPAIT(0.02)S(0.98)DQELDDKK;GGIDNPAIT(0.033)S(0.967)DQELDDKK;GGIDNPAIT(0.006)S(0.994)DQELDDKK;GGIDNPAIT(0.013)S(0.987)DQELDDKK;GGIDNPAIT(0.02)S(0.98)DQELDDKK;GGIDNPAIT(0.033)S(0.967)DQELDDKK 243.48 7.0543e-24 38313500000.0 20054800.0 17528900.0 16858500.0 16503900.0 18081400.0 17107700.0 17365100.0 18282300.0 20995100.0 17529600.0 True False 18942320.26574737 16686785.332584674 17945225.8845537 18072425.69392153 19504303.310907003 17000924.498520892 19120533.775044147 18218882.968420915 17182919.08340102 17374301.38182241 1.0902493199275036 0.960429139904466 1.0328602854402313 1.040181432148375 1.1225949684119716 0.9785098188930832 1.1005066249770885 1.0486109667397696 0.9889847485538831 1.0 24.050451632652365 -2.35916441730956 14.602993733069507 1.038124309764003 1.037656703873945 0.0 0.0522918351175692 0.0 0.0 0.011436516759590596 0.0 0.004373564972697355 2.35916441730956 -0.0004676058900578983 GGIPAS(ph)PIDPFQSR ddPTM_KYSE-520_SHP099_60min_R1 4 GGIPASPIDPFQSR 14 0 Q96LD4-2;Q96LD4 Q96LD4-2 TRIM47 Tripartite motif-containing protein 47 1 GGIPAS(1)PIDPFQSR;GGIPAS(0.999)PIDPFQS(0.001)R;GGIPAS(1)PIDPFQSR;GGIPAS(1)PIDPFQSR 127.79 5.1314e-05 3589400000.0 3393280.0 3704450.0 3108430.0 2609870.0 3199500.0 4563220.0 4145550.0 5142230.0 5692000.0 5350200.0 True False 3205047.994064023 3526482.661507189 3308804.3714638525 2857911.2601139746 3451282.4473352125 4534739.251339487 4564622.6506691165 5124392.804335505 4658476.283643256 5302801.390392618 0.6044065689261505 0.6650225799322439 0.6239729018436554 0.5389436732991381 0.6508413559648102 0.855159172952494 0.8607945715144261 0.9663557857587602 0.8784934491575109 1.0 22.338323284527057 -6.338447680009378 2.2402204753852253 0.9239177922466534 0.6093678672006534 0.9110365252381477 0.0467585599518057 0.08883325622521483 0.8750634595231291 0.019076172663511432 0.01670074439003057 4.5872490562335344e-07 6.338447680009378 -0.314549925046 GGITQPNINDS(ph)LEITK ddPTM_KYSE-520_SHP099_60min_R1 3 GGITQPNINDSLEITK 16 0 G5EA36;P30260;P30260-2;I3L328 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 GGITQPNINDS(1)LEITK;GGITQPNINDS(1)LEITK;GGITQPNINDS(1)LEITK 406.71 4.4838999999999986e-101 1593610000.0 1041260.0 1214000.0 927340.0 795930.0 835520.0 995820.0 831230.0 1097470.0 1143150.0 1153720.0 True False 983499.2320996514 1155677.617748849 987117.820196461 871574.94789492 901270.670541497 989604.7179993264 915258.8404230295 1093663.1327214246 935582.7764664076 1143498.9383805767 0.8600788326856543 1.010650363511067 0.8632433201856903 0.7622000499005662 0.7881692236792773 0.8654181344503955 0.8004020027506271 0.9564181443581141 0.8181754657257313 1.0 20.125023595682602 -9.470089824820292 9.158074149769453 0.999999999680452 0.8594343485463852 0.2575986835035129 0.0721409795245237 0.0 0.0 0.07367992113454809 0.017870005724995346 3.3877408048932566e-10 9.470089824820292 -0.14056565113406672 GGKDPLSS(ph)PGGPGSR ddPTM_KYSE-520_SHP099_60min_R1 1 GGKDPLSSPGGPGSR 15 1 G3V1D0;B7WPE2;H0Y3M3;Q32P44;Q32P44-2 G3V1D0 EML3 Echinoderm microtubule-associated protein-like 3 1 GGKDPLS(0.131)S(0.869)PGGPGSR 148.7 0.00021849 0.0 729330.0 692120.0 615180.0 549670.0 675400.0 742600.0 698940.0 815940.0 1024200.0 797740.0 True False 688872.6110166899 658869.5163066997 654835.4871228012 601910.4715356891 728550.1374996736 737965.1579465156 769595.6761970471 813109.6945818276 838231.0979809237 790672.6442323279 0.8712488234438961 0.8333025318542578 0.8282005099070902 0.7612638124341459 0.9214308131363649 0.9333384218231218 0.9733429906940253 1.0283771678622877 1.0601493602890115 1.0 19.592720985449503 -6.457552084635019 1.2094759138675875 1.0305994379480363 0.8266306501287739 0.8420924376152706 0.03648918465155509 0.17544066371461148 0.5249029273275135 0.020958137909987837 0.015840294395870966 3.4869676266734634e-07 6.457552084635019 -0.20396878781926242 GGLLTSEEDSGFSTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 12 GGLLTSEEDSGFSTSPK 17 0 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDSGFST(0.001)S(0.999)PK;GGLLTSEEDSGFST(0.002)S(0.998)PK;GGLLTSEEDSGFST(0.003)S(0.997)PK;GGLLTSEEDSGFS(0.001)T(0.012)S(0.987)PK;GGLLTSEEDSGFST(0.003)S(0.997)PK;GGLLTSEEDSGFST(0.14)S(0.86)PK;GGLLTSEEDSGFSTS(1)PK;GGLLTSEEDSGFSTS(1)PK;GGLLTSEEDSGFS(0.001)T(0.01)S(0.989)PK;GGLLTSEEDSGFS(0.001)T(0.026)S(0.974)PK;GGLLTSEEDSGFST(0.205)S(0.795)PK;GGLLTSEEDSGFS(0.005)T(0.033)S(0.963)PK 422.56 8.065399999999998e-102 9871310000.0 12097000.0 12926320.0 9806230.0 8838650.0 9576330.0 11947070.0 10398030.0 12364700.0 13843020.0 12458340.0 True False 11425955.295228349 12305320.184398124 10438355.276322749 9678672.638562975 10329932.689135697 11872503.904589413 11449164.347393474 12321809.741642676 11329476.522136204 12347968.800041866 0.9253307552242608 0.996546102736865 0.8453499879500309 0.7838271051130418 0.8365693869505625 0.9614944851941284 0.9272103398378084 0.9978815091920947 0.9175174237642868 1.0 23.557770406983906 -6.279797036547863 23.680239492453673 0.958587711860601 0.8771440688132845 0.3382621325518729 0.058208905191490114 579.2450065800205 747186.7602558128 0.02288460776394864 0.020227098852049697 5.250527814130734e-07 6.279797036547863 -0.08144364304731644 GGLLTSEEDSGFSTS(ph)PKDNSLPK ddPTM_KYSE-520_SHP099_60min_R1 3 GGLLTSEEDSGFSTSPKDNSLPK 23 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 GGLLTSEEDSGFS(0.001)T(0.036)S(0.963)PKDNSLPK;GGLLTSEEDSGFST(0.298)S(0.702)PKDNSLPK;GGLLTSEEDSGFST(0.048)S(0.952)PKDNSLPK 309.0 9.919499999999998e-61 3146080000.0 2817870.0 3386510.0 2880440.0 1737700.0 2161600.0 2504050.0 1931090.0 2050410.0 4150950.0 2421280.0 True False 2661557.133815423 3223816.9763448564 3066117.771266952 1902850.4855414422 2331705.6221784027 2488421.2951198174 2126303.4228222095 2043297.606279292 3397242.116934112 2399829.342927334 1.1090610012163744 1.3433525954026442 1.2776399206482214 0.792910750570425 0.9716130978439353 1.0369159383993607 0.8860227620304555 0.8514345456693427 1.4156182092473812 1.0 21.194500385630324 -5.235937339494385 24.563426634074716 0.983730503681215 1.2533513839339596 0.3151737048124269 0.168148239953227 687.6391595029828 662328.9853449152 0.04456960216070655 0.07715776180357654 5.808482169223053e-06 5.235937339494385 0.26962088025274467 GGLRPGS(ph)LDAEIDLLSSTLAELNGGR ddPTM_KYSE-520_SHP099_60min_R1 5 GGLRPGSLDAEIDLLSSTLAELNGGR 26 1 Q15654 Q15654 TRIP6 Thyroid receptor-interacting protein 6 1 GGLRPGS(1)LDAEIDLLSSTLAELNGGR;GGLRPGS(1)LDAEIDLLSSTLAELNGGR;GGLRPGS(1)LDAEIDLLSSTLAELNGGR;GGLRPGS(1)LDAEIDLLSSTLAELNGGR;GGLRPGS(1)LDAEIDLLSSTLAELNGGR 286.87 4.5088e-49 4943460000.0 1067256.0 1362660.0 1042556.0 1156447.0 1171395.0 1181567.0 883247.0 1086777.0 1305468.0 1031388.0 True False 1008053.1821579098 1297195.768205639 1109760.8279085797 1266355.3751815297 1263577.1221741645 1174192.4020729759 972534.2264200267 1083007.22424266 1068427.919370204 1022250.7047277216 0.9861115062047393 1.2689605027478552 1.0856053439495221 1.2387913936619157 1.236073613185447 1.1486344755181404 0.9513656698129281 1.0594340695819044 1.0451721035054524 1.0 19.963317626765942 -6.65498765641379 6.643873674914117 1.019574224091887 1.1709191323044585 0.43239259429070287 0.08203838648698787 0.19991381693628904 11.098814060488854 0.030308261605980658 0.02332518789773635 2.213157611426158e-07 6.65498765641379 0.15134490821257152 GGLS(ph)PANDTGAK ddPTM_KYSE-520_SHP099_60min_R1 2 GGLSPANDTGAK 12 0 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GGLS(1)PANDTGAK;GGLS(1)PANDTGAK 205.28 3.3866000000000003e-09 7980800000.0 25641700.0 25246600.0 21414400.0 17143100.0 19971700.0 24360200.0 19157800.0 23299100.0 27418900.0 24024300.0 True False 24219303.7855383 24033715.440080807 22794806.48825144 18772375.069739033 21543359.166571237 24208158.95584262 21094457.38611012 23218280.860150807 22440318.93422103 23811463.39262259 1.0171279012209753 1.009333825636566 0.9573038881480028 0.7883755298952018 0.9047473820212969 1.0166598565018452 0.8858950430004118 0.9750883630001688 0.9424166236323646 1.0 24.505152951951356 -9.527759583553888 22.99327925881062 0.9999999988014817 0.9420073268231903 0.057766497566459574 0.06724365137639261 0.0 0.0 0.06904402918636147 0.016745636773741 2.9664731132537156e-10 9.527759583553888 -0.05799267197829139 GGLS(ph)PANDTGAKK ddPTM_KYSE-520_SHP099_60min_R1 6 GGLSPANDTGAKK 13 1 P30419;B7Z8J4;K7EN42 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 1 GGLS(1)PANDTGAKK;GGLS(1)PANDTGAKK;GGLS(1)PANDTGAKK;GGLS(1)PANDTGAKK;GGLS(1)PANDTGAKK;GGLS(1)PANDTGAKK 219.52 2.346e-11 7385050000.0 12242370.0 13005330.0 12857310.0 8684560.0 9912230.0 9925470.0 7679980.0 8414560.0 15032520.0 9223420.0 True False 11563261.331540454 12380534.425401675 13686112.775023345 9509937.971291834 10692266.10812612 9863521.460063843 8456347.327781793 8385371.855333065 12302993.306991026 9141707.674512168 1.2648907341217852 1.3542912184689104 1.497106805677166 1.0402802528685446 1.1696136530308268 1.0789583096781963 0.9250292865258406 0.9172653681228694 1.3458090922435402 1.0 23.12403225577055 -5.273691181142035 24.924599881351515 1.0634055909259599 1.3703157483547386 0.542046720044753 0.12797695320051303 533.3011079315414 1084926.2697933593 0.03637774496350679 0.05439163277809971 5.324867662704841e-06 5.273691181142035 0.3069101574287787 GGLVS(ph)DAYGEDDFSR ddPTM_KYSE-520_SHP099_60min_R1 2 GGLVSDAYGEDDFSR 15 0 J3KS14;F5H478;J3KRU5;J3QLH3;J3QQJ0;Q9UHR5;X6R3T8;Q9UHR5-2 J3KS14 SAP30BP SAP30-binding protein 1 GGLVS(1)DAYGEDDFSR;GGLVS(1)DAYGEDDFSR 162.29 5.1087999999999994e-08 431100000.0 1091530.0 987510.0 983450.0 885360.0 939840.0 1070240.0 839220.0 1179130.0 1193610.0 1077220.0 True False 1030980.6549888919 940068.5373172696 1046844.7605756352 969504.3482068097 1013800.0610418901 1063560.2351746284 924056.5475979155 1175039.8732410118 976880.5124594908 1067676.6688644772 0.9656300311267332 0.8804805469029078 0.9804885609132982 0.9080505142422207 0.9495384610400006 0.9961444941058544 0.8654835068941722 1.1005577882400672 0.9149591266225268 1.0 20.026043382220067 -7.249093933244144 24.997687305258232 1.0058188534395245 0.9366211939499469 0.23896064537185913 0.05724437664673463 1005.9249286991144 2036853.108213114 0.02501141528083952 0.014294530385457244 5.6351576022168485e-08 7.249093933244144 -0.06919765948957757 GGNFGFGDSR ddPTM_KYSE-520_SHP099_60min_R1 7 GGNFGFGDSR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;;;; 156.83 0.00073953 11836880000.0 16306110.0 19016920.0 13326610.0 10684280.0 17487530.0 18650040.0 13781760.0 14966340.0 14344580.0 15678460.0 False True 15401577.572875582 18103318.618221115 14185664.603929907 11699710.75885407 18863699.120565068 18533638.18247891 15174954.797815869 14914425.25971003 11739965.86943488 15539561.04205731 0.9911205040600388 1.164982625263679 0.9128742160436112 0.7528984073095237 1.213914541698513 1.1926744991263414 0.9765369019591579 0.9597713358404804 0.755488899439376 1.0 23.88944241561537 -7.365812123384192 2.949795637899921 0.8766002863304607 1.0339709541745083 0.14761418804037996 0.1430735152794729 0.5285685082464597 8.70857229157991 0.10081549181794972 0.041450792949108084 4.307128974103383e-08 7.365812123384192 0.15737066784404763 GGNFGGR ddPTM_KYSE-520_SHP099_60min_R1 6 GGNFGGR 7 0 F8W6I7;P09651-3;P09651-2;P09651;Q32P51;H0YH80;P51991;P51991-2 F8W6I7;P51991 HNRNPA1;HNRNPA1L2;HNRNPA3 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2;Heterogeneous nuclear ribonucleoprotein A3 0 ;;;;; 144.29 0.011588 7174630000.0 5308300.0 4881350.0 3696410.0 3551010.0 5484090.0 5820290.0 4740600.0 4204600.0 4283290.0 4943420.0 False True 5013838.0171663 4646842.618944274 3934686.5030651125 3888496.922749913 5915656.682796237 5783963.411183048 5219826.111797475 4190015.2239610143 3505552.5089540267 4899625.1447225595 1.0233105327591765 0.9484077825728036 0.8030586803774584 0.793631514226809 1.20736923908721 1.1804910049931103 1.065352135646501 0.8551705692167341 0.7154736138804203 1.0 22.224239946605728 -7.345844346587666 6.704295957439125 0.8361531476495816 0.999715285674523 0.17497459511429492 0.14354012051198817 0.4723306193972624 31.576130977343276 0.08846597331052031 0.041944129446084916 4.509783085628813e-08 7.345844346587666 0.16356213802494135 GGNLPPVS(ph)PNDSGAK ddPTM_KYSE-520_SHP099_60min_R1 5 GGNLPPVSPNDSGAK 15 0 Q9UK61;Q9UK61-2;Q9UK61-3;A0A087X0F1;Q9UK61-4 Q9UK61 FAM208A Protein FAM208A 1 GGNLPPVS(0.999)PNDS(0.001)GAK;GGNLPPVS(1)PNDSGAK;GGNLPPVS(1)PNDSGAK;GGNLPPVS(1)PNDSGAK;GGNLPPVS(1)PNDSGAK 238.05 1.0766e-18 3587910000.0 3324390.0 3568680.0 2592250.0 2128590.0 2532240.0 3498600.0 2632660.0 3258200.0 3832330.0 3422970.0 True False 3139979.4596928353 3397235.256102111 2759350.5827466478 2330890.553616082 2731512.881525275 3476763.939660226 2898794.9650855833 3246898.064669599 3136475.477177543 3392645.148830364 0.9255254593234907 1.0013529582583458 0.8133330960645712 0.6870422491487714 0.8051277872273147 1.0247944559892632 0.8544350611159441 0.9570402804398768 0.9244926420491878 1.0 21.693979109660464 -6.245485658051021 24.781047216866607 0.9433601723087311 0.8443818308181891 0.26379677363091536 0.08762151379010255 1238.9496979568662 1924472.076541101 0.03208427933519668 0.031983240507980536 5.682171558022302e-07 6.245485658051021 -0.09897834149054208 GGNVFAALIQDQS(ph)EEEEEEEKHPPKPAKPEK ddPTM_KYSE-520_SHP099_60min_R1 2 GGNVFAALIQDQSEEEEEEEKHPPKPAKPEK 31 3 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 GGNVFAALIQDQS(1)EEEEEEEKHPPKPAKPEK;GGNVFAALIQDQS(1)EEEEEEEKHPPKPAKPEK 200.91 4.6186999999999995e-16 1530280000.0 1671110.0 1701430.0 1616950.0 1813030.0 1671250.0 1445970.0 1674410.0 1679490.0 1953410.0 1364950.0 True False 1578410.1970248057 1619690.7489015034 1721181.1842114744 1985339.8260926518 1802767.866888257 1436945.1648746636 1843675.70346682 1673664.2411859117 1598719.9854588155 1352857.6049150294 1.1667230840040574 1.197236681094189 1.2722559846345238 1.4675157377094004 1.3325629100495655 1.0621555141162957 1.3628010049014865 1.2371325962949602 1.1817355940865841 1.0 20.36757856570147 GGPAS(ph)PGGLQGLETR ddPTM_KYSE-520_SHP099_60min_R1 4 GGPASPGGLQGLETR 15 0 Q8NCD3;C9JWC4;Q8NCD3-3;Q8NCD3-2 Q8NCD3 HJURP Holliday junction recognition protein 1 GGPAS(1)PGGLQGLETR;GGPAS(1)PGGLQGLETR;GGPAS(1)PGGLQGLETR;GGPAS(1)PGGLQGLETR 267.51 3.8458e-25 6041200000.0 4181720.0 4523940.0 3925060.0 2999470.0 3566350.0 4171210.0 3253780.0 3856530.0 4431840.0 4335580.0 True False 3949751.6555478466 4306603.131827618 4178075.6479180455 3284538.7269764603 3847001.4552442394 4145175.9311582153 3582703.8362326203 3843152.5975508667 3627129.5735947913 4297170.134230198 0.9191517980833708 1.0021951650278584 0.9722853686049162 0.7643492401691602 0.8952406665493585 0.9646292331175732 0.8337356270103631 0.894344993915242 0.8440739976064645 1.0 22.034955466973877 GGPASVPS(ph)SSPGTSVK ddPTM_KYSE-520_SHP099_60min_R1 1 GGPASVPSSSPGTSVK 16 0 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GGPASVPS(0.488)S(0.311)S(0.2)PGT(0.002)SVK 171.26 3.4982e-08 424910000.0 673490.0 924060.0 540080.0 463350.0 535910.0 765810.0 507060.0 760150.0 791000.0 721780.0 True False 636130.1671309709 879666.7705576624 574894.4209585526 507386.6446887433 578083.0680892062 761030.2957272033 558318.5732287102 757513.2170703432 647374.3394873182 715385.5907363428 0.8892129997701034 1.2296400457999521 0.803614761609633 0.7092491815029329 0.808072004209909 1.0638043393408 0.7804442533627713 1.0588879995341234 0.9049306386238211 1.0 19.448361534365453 -8.837117073521307 12.435830503900643 1.0000000040693346 0.9175670957832953 0.026909326831507485 0.1506265006725545 0.0 0.0 0.14941286657015346 0.0362379429820624 1.4550667828164873e-09 8.837117073521307 -0.08243290828603933 GGPASVPSS(ph)SPGTSVK ddPTM_KYSE-520_SHP099_60min_R1 6 GGPASVPSSSPGTSVK 16 0 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GGPASVPS(0.129)S(0.436)S(0.436)PGTSVK;GGPASVPS(0.103)S(0.441)S(0.441)PGT(0.016)SVK;GGPASVPS(0.302)S(0.543)S(0.155)PGTSVK;GGPASVPS(0.041)S(0.773)S(0.186)PGTSVK;GGPASVPSS(0.835)S(0.165)PGTSVK;GGPASVPS(0.003)S(0.677)S(0.32)PGTSVK 319.43 2.7388e-47 3890140000.0 7005290.0 8784930.0 5835690.0 4886330.0 5241230.0 7650030.0 5471850.0 7177340.0 8170030.0 7637620.0 True False 6616692.5990006 8362888.77635123 6211867.9148341315 5350725.334071309 5653684.982480621 7602283.325135462 6024997.998109731 7152443.482743747 6686558.501696044 7569956.628778449 0.8740727224045304 1.1047472510685619 0.8205949148002621 0.7068369868500484 0.7468583057645531 1.0042703938664743 0.7959091833108659 0.9448460319511665 0.8833020887168599 1.0 22.851853603798656 -10.30052329164932 11.272606656522942 1.0000000016221875 0.8755404912886787 0.09772431068037157 0.11329294775941622 4.914211993637292e-09 2.2832741124235943e-10 0.11515188116127108 0.02792843284730933 5.005837050019542e-11 10.30052329164932 -0.12445951033350877 GGPASVPSSS(ph)PGTSVK ddPTM_KYSE-520_SHP099_60min_R1 2 GGPASVPSSSPGTSVK 16 0 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GGPASVPS(0.001)S(0.25)S(0.749)PGTSVK;GGPASVPSS(0.015)S(0.985)PGTSVK 338.56 1.3374999999999998e-58 2845400000.0 3996500.0 5091800.0 3274800.0 2815200.0 2854700.0 4286200.0 3263300.0 3888800.0 4452300.0 4289500.0 True False 3774806.1781747704 4847182.285052386 3485898.8478652593 3082755.761579259 3079348.648978851 4259448.235914841 3593186.210738866 3875310.660452744 3643874.553349413 4251498.367180502 0.887876661864541 1.1401115245557363 0.8199224242386406 0.7250986582463803 0.7242972672293428 1.0018698981036211 0.8451576127787123 0.9115164409724947 0.857080078279778 1.0 22.0195399531466 -4.784468685537012 24.979004924184682 0.8522416525652214 1.0139942064607446 0.24672843272781964 0.10639508588202984 262.65494200231905 284891.5796348532 0.028000441906774306 0.05834794376848377 1.6425980936519983e-05 4.784468685537012 0.16175255389552312 GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 12 GGPEGVAAQAVASAASAGPADAEMEEIFDDASPGK 35 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK;GGPEGVAAQAVASAAS(0.002)AGPADAEMEEIFDDAS(0.998)PGK;GGPEGVAAQAVASAASAGPADAEMEEIFDDAS(1)PGK 196.22 9.1919e-16 1803676000.0 698844.0 958023.0 701424.0 686507.0 682081.0 859492.0 686738.0 941833.0 984483.0 951766.0 True False 660077.7302090242 911998.1370581596 746638.9133580801 751752.4188741449 735756.8941899834 854127.5916156304 756160.178957003 938566.0011484743 805725.7039968307 943334.0937027422 0.699728478611549 0.9667816981769588 0.7914893761842094 0.796910049040412 0.7799536761170329 0.9054348796649959 0.8015825824644474 0.9949454889989692 0.8541254995186532 1.0 19.847409284537278 -7.553883501948705 0.630634826496348 0.9910164302907437 0.8135429930377551 0.343108214784411 0.07919775346329645 0.8197817208004584 0.7222151520263576 0.0735842221327036 0.03558666655388415 2.7932930323206197e-08 7.553883501948705 -0.1774734372529886 GGPGKLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 11 GGPGKLSPR 9 1 Q12888;Q12888-2;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR;GGPGKLS(1)PR 95.36200000000001 0.0051207 93871100000.0 31825780.0 27389010.0 27651530.0 25295070.0 27165190.0 27299460.0 25746540.0 25817870.0 31313760.0 25377180.0 True False 30060340.540280446 26073200.84785783 29433991.867812317 27699105.847559873 29302935.904211927 27129073.94391948 28349251.525215816 25728313.834906187 25627970.539651576 25152357.928347282 1.1951301196458308 1.0366106001725086 1.1702279345603435 1.101252849791166 1.165017450359469 1.078589690127795 1.127101149163656 1.0228986844175667 1.0189092653921035 1.0 24.584190317207646 -7.290428026402303 4.883298096415752 1.013522608071039 1.122304864259659 0.5708082554183516 0.04406038389705448 0.141858789898646 9.104391284788262 0.022549269577699278 0.010897353040460743 5.123561736265894e-08 7.290428026402303 0.10878225618861981 GGPGSAVS(ph)PYPTFNPSSDVAALHK ddPTM_KYSE-520_SHP099_60min_R1 2 GGPGSAVSPYPTFNPSSDVAALHK 24 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 1 GGPGS(0.003)AVS(0.994)PYPT(0.003)FNPSSDVAALHK;GGPGS(0.001)AVS(0.999)PYPTFNPSSDVAALHK 220.99 2.3371e-21 2209500000.0 929270.0 1045980.0 753980.0 775640.0 706280.0 997760.0 768000.0 1032380.0 1164640.0 994030.0 True False 877721.5406461818 995729.5507520114 802582.7572106535 849356.5923953297 761860.217816507 991532.6097397214 845636.9349576968 1028798.914739303 953170.7341852229 985223.6675436372 0.8908855618892306 1.0106634498890668 0.8146198509539011 0.8620951976447625 0.7732865570677766 1.0064035633774548 0.8583197529816163 1.0442287864483684 0.9674663384423876 1.0 19.910091759843425 -7.258694235814544 24.994341370765977 1.004385674096869 0.889072707199495 0.35082277719741084 0.0722129249814296 276.4194228029113 2516809.4814968617 0.03610559058852045 0.019586531684883647 5.511956280381898e-08 7.258694235814544 -0.11531296689737403 GGPISFS(ph)SSR ddPTM_KYSE-520_SHP099_60min_R1 1 GGPISFSSSR 10 0 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 GGPISFS(0.493)S(0.493)S(0.014)R 155.98 0.00010549 267810000.0 180810.0 183520.0 180460.0 161290.0 140970.0 142420.0 154420.0 155400.0 196020.0 187800.0 True False 170780.10886420106 174703.42373086404 192092.74034620888 176618.95310639308 152063.53699041874 141531.10395198347 170030.28059396823 154860.9536706328 160427.70926207863 186136.23810618912 0.9175005931234759 0.9385782452055211 1.032000766216311 0.9488692524538584 0.8169475140228621 0.7603629760221178 0.9134722089793574 0.8319763805599528 0.8618832683754788 1.0 17.505999429600763 -5.679425950137811 6.425892444836544 0.8531997788519294 0.9645756422922604 0.32754489063182857 0.06571440065307615 0.21990751496982605 13.847623583368785 0.019153023453508302 0.024707163984249114 2.0920595856334067e-06 5.679425950137811 0.11137586344033101 GGPISFSSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 GGPISFSSSR 10 0 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 GGPISFS(0.07)S(0.07)S(0.861)R 152.64 0.00013477 235340000.0 236150.0 205600.0 210580.0 169200.0 171390.0 175970.0 164460.0 199440.0 215310.0 211750.0 True False 223050.28874664597 195722.66738810827 224154.32373991294 185280.71712816512 184877.41792429512 174871.7059572429 181085.2217749254 198748.1891896459 176215.13152340645 209874.05973900735 1.0627815987551017 0.9325719797458661 1.0680420630289615 0.8828185691865602 0.8808969443589301 0.8332221055556258 0.8628280312493939 0.94698787185421 0.8396232089975385 1.0 17.67916433616655 -5.276990212964357 24.77608198773701 0.8859610394920633 1.012275888199963 0.5005235641508035 0.05851650482581275 542.0449831025933 863602.142735038 0.015548395748926053 0.023151646097610824 5.284571606780246e-06 5.276990212964357 0.12631484870789966 GGPS(ph)PGDVEAIK ddPTM_KYSE-520_SHP099_60min_R1 1 GGPSPGDVEAIK 12 0 P09661;H0YLR3;H0YMA0 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 GGPS(1)PGDVEAIK 164.81 3.0701e-06 405730000.0 667860.0 568630.0 585350.0 467130.0 512520.0 561540.0 536810.0 609050.0 692130.0 585070.0 True False 630812.4744540966 541312.1612689685 623082.597593115 511525.8947522437 552852.4081601014 558035.2205673137 591075.9935607302 606937.3477033381 566456.6391774425 579886.7349775725 1.087820149013227 0.9334791237980364 1.0744901719767967 0.8821134609537625 0.9533799875271908 0.9623176163684726 1.0192955932740737 1.0466480971095362 0.9768401396513245 1.0 19.145411611153474 -6.772783702015677 24.824087906465767 1.014583308323697 0.9783756487201779 0.04724204887236949 0.06005699620470445 581.6555213458955 1272787.4181836331 0.02439628229803875 0.016619769899058074 1.6873932130792584e-07 6.772783702015677 -0.03620765960351913 GGPS(ph)PPCSPLSEAWPLTTSSAPPGEPALLPGPHEPS(ph)PPGGSPALLR ddPTM_KYSE-520_SHP099_60min_R1 2 GGPSPPCSPLSEAWPLTTSSAPPGEPALLPGPHEPSPPGGSPALLR 46 0 A0A1B0GTL5 A0A1B0GTL5 2 GGPS(0.719)PPCS(0.134)PLS(0.148)EAWPLTTSSAPPGEPALLPGPHEPS(0.822)PPGGS(0.178)PALLR;GGPS(0.958)PPCS(0.031)PLS(0.011)EAWPLTTSSAPPGEPALLPGPHEPS(0.838)PPGGS(0.162)PALLR 110.33 9.2387e-07 107023000.0 55137.0 58926.0 47454.0 52008.0 47978.0 48616.0 34213.8 35803.0 48263.0 41506.0 True False 52078.44069711549 56095.10651027074 50512.96076908456 56950.82468322464 51753.59564252193 48312.56951081044 37672.464798509944 35678.80774948301 39499.65581122182 41138.28913117937 1.2659359880293224 1.363574122671897 1.2278819035962283 1.3843751377609113 1.2580395717841617 1.1743942329919006 0.9157518602288537 0.8672895373872382 0.9601676843017858 1.0 15.328194175520032 -6.59493897706246 2.5177710642310043 0.9209936758724795 1.303803036898491 0.9034356277777833 0.05601845792745608 0.07606724999728895 0.9784690001199609 0.023395629368352357 0.01745196701846449 2.5413297639953253e-07 6.59493897706246 0.3828093610260115 GGQGDPAVPAQQPADPST(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 GGQGDPAVPAQQPADPSTPER 21 0 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 GGQGDPAVPAQQPADPS(0.238)T(0.762)PER 193.38 9.0993e-13 326500000.0 253810.0 337360.0 216510.0 201560.0 227270.0 310160.0 235410.0 290410.0 305820.0 299040.0 True False 239730.6533423087 321152.7192123159 230466.5810282486 220716.20179877622 245154.8560105872 308224.1763919897 259207.54018019713 289402.6354922036 250290.7970948312 296390.7382495998 0.8088331462652659 1.0835450564648321 0.7775768648822136 0.7446798206390116 0.8271339970283913 1.039925127931712 0.874546693702387 0.9764226682700479 0.8444622749448182 1.0 18.177140840804785 -6.219985080336866 24.98101303508474 0.9410650865313592 0.8517282318452911 0.19220368528647547 0.1006952318654766 988.5679117317246 595726.5449950412 0.034136943072333545 0.03413658933687229 6.025802866377741e-07 6.219985080336866 -0.08933685468606811 GGQS(ph)DDDEDEGVPASYHTVSLQLLDLMHTLHTR ddPTM_KYSE-520_SHP099_60min_R1 1 GGQSDDDEDEGVPASYHTVSLQLLDLMHTLHTR 33 0 Q92538-3;Q92538-2 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GGQS(1)DDDEDEGVPASYHTVSLQLLDLMHTLHTR 66.778 0.027831 12301000.0 7857.5 9926.0 9765.1 7665.2 10179.0 9905.8 7780.8 7835.6 11663.0 10960.0 True False 7421.628811462086 9449.140060770247 10394.573970712434 8393.698303373583 10980.029389412464 9843.974227830055 8567.359197290165 7808.420132442785 9545.293200304164 10862.902926750972 0.6832086102127997 0.8698540458739445 0.9568873109520999 0.7726938517238584 1.0107822433332305 0.9062010674502389 0.7886804526432981 0.7188152361385628 0.8787055600762054 1.0 13.407122070020153 -4.261612600523258 9.846869355375503 0.8707165374264216 0.6827116972994136 0.28505046724134375 0.09192034468168825 0.10262497282193028 310.1868601688507 0.023302060472654065 0.13053281521015114 5.475041299105796e-05 4.261612600523258 -0.18800484012700802 GGREGFES(ph)DTDSEFTFK ddPTM_KYSE-520_SHP099_60min_R1 4 GGREGFESDTDSEFTFK 17 1 E9PMS6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 GGREGFES(0.995)DT(0.005)DSEFTFK;GGREGFES(0.937)DT(0.062)DS(0.001)EFTFK;GGREGFES(0.675)DT(0.324)DS(0.001)EFTFK;GGREGFES(0.967)DT(0.033)DSEFTFK 184.68 2.3305e-12 1288020000.0 1415240.0 1648230.0 1742710.0 1009960.0 1083570.0 1054480.0 763050.0 869230.0 1923460.0 1019780.0 True False 1336733.8159890044 1569046.55675633 1855047.8750345872 1105946.294744453 1168840.7943300568 1047898.5991805055 840186.5406503527 866214.8440098066 1574208.1504807568 1010745.5425768354 1.322522593155426 1.5523655466796713 1.835326298155373 1.094188644082376 1.1564144931573648 1.0367580711847124 0.8312542625796274 0.857005851147702 1.557472265934913 1.0 19.946988410612263 -5.3447609471518405 7.671867846018819 1.0598057255144926 1.5672640157239297 0.5117930074163317 0.22073757763842164 0.2265245094637261 18.572479821627393 0.06309642558780326 0.09383873408518453 4.521047322111839e-06 5.3447609471518405 0.5074582902094371 GGRS(ph)PDEVTLTSIVPTR ddPTM_KYSE-520_SHP099_60min_R1 6 GGRSPDEVTLTSIVPTR 17 1 A0A0C4DGG1;Q9UKS6;H0YDM6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 GGRS(1)PDEVTLTSIVPTR;GGRS(0.999)PDEVT(0.001)LTSIVPTR;GGRS(1)PDEVTLTSIVPTR;GGRS(1)PDEVTLTSIVPTR;GGRS(1)PDEVTLTSIVPTR;GGRS(1)PDEVTLTSIVPTR 193.59 1.4295e-12 6255890000.0 2066357.0 2107775.0 1823963.0 1612796.0 1710432.0 1782778.0 1503391.0 1789943.0 2435111.0 1873449.0 True False 1951732.0580294454 2006514.325165226 1941538.5734239847 1766075.6469352013 1845033.267373175 1771651.021214077 1655368.4339622245 1783734.1055088353 1992956.226552847 1856851.6993812644 1.0510974348031115 1.0806002040086624 1.0456077747463297 0.9511129227625925 0.9936352310677112 0.9541155181129555 0.8914919993415857 0.9606228144677396 1.0732985446371055 1.0 20.824427165905625 -5.154703143857602 4.480153024830127 0.9697952703088734 1.0650791710442633 0.4323662947573056 0.044201901678451734 0.20818702407780257 6.859832284635456 0.0126473622943074 0.02275012447907726 7.003205270986547e-06 5.154703143857602 0.09528390073538995 GGRSPDEVTLT(ph)SIVPTR ddPTM_KYSE-520_SHP099_60min_R1 1 GGRSPDEVTLTSIVPTR 17 1 A0A0C4DGG1;Q9UKS6;H0YDM6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 GGRS(0.072)PDEVT(0.414)LT(0.44)S(0.072)IVPT(0.004)R 99.39200000000001 0.0031384 208510000.0 273540.0 255400.0 264240.0 175870.0 248270.0 225430.0 209310.0 230200.0 310760.0 249300.0 True False 258366.1909115287 243130.20063678408 281273.3331989484 192584.6319227566 267807.436536932 224023.0077509874 230469.0974687443 229401.48992908394 254333.81762209733 247091.39595246493 1.0456300589326584 0.9839687039671633 1.1383372217989305 0.7794064669083247 1.0838395869860737 0.906640261136752 0.9327281372155978 0.9284074382469224 1.0293106995559882 1.0 17.914685249438488 -5.218331733398279 24.99990299707437 0.9513585757524752 1.0487776033233671 0.24376060117743115 0.08406303036443105 698.0201521748166 404809.7163393009 0.021336417098777663 0.03695552427031895 6.048786650807288e-06 5.218331733398279 0.09741902757089194 GGRT(ph)PPQQGGR ddPTM_KYSE-520_SHP099_60min_R1 1 GGRTPPQQGGR 11 1 Q9Y3X0;M0QYB4;A0A2R8Y4Z8 Q9Y3X0;A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 GGRT(1)PPQQGGR 78.098 0.044888 339710000.0 200050.0 174710.0 172720.0 146670.0 167960.0 167890.0 149040.0 130490.0 208180.0 151000.0 True False 188952.8277102117 166316.6693549434 183853.80756177113 160609.47270205658 181177.49643832573 166842.1362343665 164106.41769022786 130037.36064659484 170379.75979073308 149662.2574762223 1.2625282479133508 1.111279972382931 1.2284580672650955 1.073146131900179 1.210575728934935 1.1147909903796132 1.096511708814097 0.8688721046938279 1.138428369743135 1.0 17.19135091615943 -6.872745887269923 2.6597979365090367 1.0009366504267538 1.167582446138993 0.44226654516406383 0.08181844586236853 0.23936889191416064 3.420491978682918 0.03667248229925644 0.022829106959954736 1.3404607833085877e-07 6.872745887269923 0.16664579571223914 GGS(ph)DDSSKDPIDVNYEK ddPTM_KYSE-520_SHP099_60min_R1 1 GGSDDSSKDPIDVNYEK 17 1 P09874 P09874 PARP1 Poly [ADP-ribose] polymerase 1 1 GGS(1)DDSSKDPIDVNYEK 92.098 0.0010169 875230000.0 565760.0 635470.0 525370.0 505680.0 546540.0 511690.0 489710.0 596630.0 780030.0 661650.0 True False 534376.1649854016 604941.0673400831 559236.1908217211 553739.6751617636 589549.588612779 508496.35290823184 539214.665909028 594560.429784489 638396.2149561218 655788.295755911 0.8148607842557472 0.9224639586511412 0.8527693989675483 0.8443878592305181 0.8989937643416154 0.7753971155006671 0.8222389289328327 0.9066347076218458 0.9734791228932473 1.0 19.322870627760363 -7.652252782492771 2.6151478549456573 0.9946634461462718 0.8498538358406085 0.6642037088918713 0.039527990222559733 0.17495259913719843 2.2217533374082277 0.035787079847167017 0.01085506917137081 2.227138458869523e-08 7.652252782492771 -0.1448096103056633 GGS(ph)DGYGSGR ddPTM_KYSE-520_SHP099_60min_R1 3 GGSDGYGSGR 10 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 GGS(1)DGYGSGR;GGS(1)DGYGSGR;GGS(1)DGYGSGR 108.9 0.00078519 489620000.0 1157180.0 937990.0 1021070.0 914530.0 1033970.0 1068630.0 1019480.0 905590.0 1226140.0 1081490.0 True False 1092988.91861886 892927.5524483053 1086889.805969763 1001446.6562365283 1115337.5565154525 1061960.2837818286 1122538.98756598 902448.7196562942 1003503.8844740597 1071908.8399864894 1.019665924793228 0.8330256446616859 1.0139759701799478 0.9342647610305657 1.0405153077471685 0.9907188411611698 1.0472336319011315 0.8419080858290794 0.9361839804275782 1.0 20.031750786974687 -3.9095148093108087 21.657304532450752 0.9598466684023843 6.4711041023037925 0.0597289706919355 0.07130687994361908 3981.59341504133 917308.3231674246 0.017092151977717882 40517.90505808703 0.00012316439863319217 3.9095148093108087 5.511257433901408 GGS(ph)GAPILLR ddPTM_KYSE-520_SHP099_60min_R1 4 GGSGAPILLR 10 0 M0QX80;M0QY80;M0QXB5;O95571 M0QX80 ETHE1 Persulfide dioxygenase ETHE1, mitochondrial 1 GGS(1)GAPILLR;GGS(1)GAPILLR;GGS(1)GAPILLR;GGS(1)GAPILLR 127.51 0.00040303 759790000.0 912804.0 886439.0 934320.0 820292.0 831973.0 965846.0 854974.0 860988.0 961410.0 978880.0 True False 862168.9424903382 843853.1398679354 994547.7621648551 898252.305050217 897444.5418211663 959817.796851617 941403.1156621384 858001.4335841096 786842.1791738337 970207.8847571159 0.8886435124222637 0.8697652875488511 1.0250872805613538 0.9258348846289655 0.9250023174629576 0.989290864289255 0.9703107245905465 0.8843480320703678 0.8110036947090093 1.0 19.887934378617828 -9.877685880959556 4.301257531892377 1.0000010482724437 0.9252205645182388 0.13403080082543783 0.05936424658624923 82147663.41687377 143082624.9813202 1314.5682863535833 0.015490668724700837 1.325299759140968e-10 9.877685880959556 -0.07478048375420498 GGS(ph)GSHNWGTVK ddPTM_KYSE-520_SHP099_60min_R1 4 GGSGSHNWGTVK 12 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 GGS(0.999)GS(0.001)HNWGTVK;GGS(0.958)GS(0.042)HNWGTVK;GGS(0.976)GS(0.024)HNWGTVK;GGS(0.855)GS(0.145)HNWGTVK 184.02 7.5468e-08 5020100000.0 8084000.0 7509700.0 7400700.0 8087600.0 7686800.0 7063200.0 6897700.0 7157100.0 7622500.0 7508800.0 True False 7635564.404945521 7148922.739710496 7877760.963538677 8856243.072374387 8291707.428090745 7019115.948838995 7594986.83106473 7132273.690579699 6238446.147587964 7442277.873758004 1.0259714209098614 0.9605826147553695 1.05851475813826 1.1899909171091452 1.11413569457382 0.9431408055306416 1.0205191152355637 0.9583455242552282 0.8382441845641325 1.0 22.827312826975252 -6.272182706767104 24.190706296805445 0.9537258353613545 1.0698152503034979 0.40726969019413606 0.07103540331478479 549.6316603270966 1237598.4901669896 0.027481716102344022 0.02449782911998661 5.343395166039052e-07 6.272182706767104 0.11608941494214342 GGS(ph)GYHS(ph)RS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 2 GGSGYHSRSPAR 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 GGS(0.948)GY(0.196)HS(0.857)RS(1)PAR;GGS(0.892)GY(0.116)HS(0.992)RS(1)PAR 115.56 0.0016304000000000002 303600000.0 1011520.0 997800.0 857600.0 942870.0 844030.0 929170.0 890940.0 970530.0 1122600.0 903200.0 True False 955408.9691848707 949864.1902716648 912882.2682085161 1032480.0813157968 910450.359126221 923370.7053718882 981004.909936471 967163.4579534053 918764.1384430629 895198.3506789674 1.06725952796968 1.0610656169677208 1.019754189131533 1.1533534222138673 1.0170375743383415 1.031470516753693 1.0958520077616578 1.080390124959296 1.026324655028935 1.0 19.77184785271999 -7.955656288255699 4.485642145569286 1.000296025847762 1.0650626854787744 0.24649208660210264 0.03809310669306848 0.246324847875411 10.715436763234067 0.03605597284576039 0.009440610029467526 1.1074999409628308e-08 7.955656288255699 0.06476665963101236 GGS(ph)LPK ddPTM_KYSE-520_SHP099_60min_R1 8 GGSLPK 6 0 P06748;P06748-2 P06748 NPM1 Nucleophosmin 1 GGS(1)LPK;GGS(1)LPK;GGS(1)LPK;GGS(1)LPK;GGS(1)LPK;GGS(1)LPK;GGS(1)LPK;GGS(1)LPK 84.568 0.017747 19431690000.0 38039300.0 28423300.0 26376000.0 30147000.0 30034900.0 31345400.0 33307800.0 28889100.0 31277400.0 31622800.0 True False 35929184.199535444 27057802.003756873 28076239.163092107 33012161.81597397 32398475.754795603 31149761.731614236 36674877.47680202 28788890.454866644 25598212.59909056 31342646.59416615 1.146335364232547 0.8632902751994523 0.8957839306498762 1.0532665681818514 1.0336866625942807 0.9938459293163898 1.1701270142141846 0.9185213625267102 0.8167214763495816 1.0 24.901623671305607 -7.498256880452082 24.58397326810049 0.8947809071887103 1.0141974687732076 0.20263224905849286 0.09902218652349316 897.308842927585 895933.3351108866 0.05494648147758582 0.02617380084387904 3.1749955398860356e-08 7.498256880452082 0.11941656158449732 GGS(ph)LPKVEAK ddPTM_KYSE-520_SHP099_60min_R1 8 GGSLPKVEAK 10 1 P06748;P06748-2 P06748 NPM1 Nucleophosmin 1 GGS(1)LPKVEAK;GGS(1)LPKVEAK;GGS(1)LPKVEAK;GGS(1)LPKVEAK;GGS(1)LPKVEAK;GGS(1)LPKVEAK;GGS(1)LPKVEAK;GGS(1)LPKVEAK 110.51 0.0004428999999999999 19846130000.0 11629200.0 11046690.0 11058190.0 8564480.0 9400570.0 8866030.0 8231450.0 8375520.0 12438900.0 8668730.0 True False 10984105.093764544 10515990.430980258 11771018.621129574 9378445.604195204 10140341.377073301 8810693.818083167 9063565.297210323 8346467.275981064 10180309.319151465 8591931.796369882 1.278420889980221 1.2239378384525 1.370008386950053 1.0915409743077367 1.1802166983399038 1.025461331269612 1.0548926029696497 0.9714308113464625 1.1848684976122223 1.0 23.03455111043271 -5.636642163372741 1.3998544989209514 1.049537708200129 1.2834415006310158 0.6163606825952372 0.07672133198919326 0.26689461961309924 1.081677581454489 0.026945507378566495 0.04251328448306129 2.3086486146454766e-06 5.636642163372741 0.23390379243088688 GGS(ph)PAPLPAK ddPTM_KYSE-520_SHP099_60min_R1 2 GGSPAPLPAK 10 0 A0A087WWH3;Q9NZM4-2;Q9NZM4 A0A087WWH3 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein 1 GGS(1)PAPLPAK;GGS(1)PAPLPAK 133.07 0.00031371 1517810000.0 2866200.0 2533000.0 2142340.0 2056020.0 2038940.0 2570100.0 2166780.0 2723100.0 2753200.0 2534200.0 True False 2707206.172371952 2411310.8778894837 2280438.6642651963 2251423.522635048 2199392.9780183374 2554059.052569809 2385819.2681349474 2713654.20167632 2253288.2825240023 2511748.9595777635 1.0778171767719358 0.9600126910353478 0.9079086727873269 0.8963569046380823 0.8756420380435095 1.0168448733026083 0.9498637429657837 1.0803843239702178 0.8970993195525362 1.0 21.260260848493736 -6.2955378649450235 24.925425681416904 0.9914265519622962 0.9398605544444358 0.09902794186153696 0.06762678941152013 1398.1977421693105 1022055.0235636642 0.024111505392149252 0.021265406899772906 5.063631991803377e-07 6.2955378649450235 -0.051565997517860396 GGS(ph)PAVTLLISEK ddPTM_KYSE-520_SHP099_60min_R1 1 GGSPAVTLLISEK 13 0 Q8N884-2;Q8N884 Q8N884-2 MB21D1 Cyclic GMP-AMP synthase 1 GGS(1)PAVTLLISEK 82.925 0.006417699999999999 0.0 167130.0 174560.0 186410.0 124250.0 174520.0 172620.0 140710.0 156460.0 204040.0 183280.0 True False 157858.96573460492 166173.87558009804 198426.2868665456 136058.6826428752 188253.73111703116 171542.6145498621 154934.33999726252 155917.27677803833 166991.47942982617 181656.28178968246 0.8689981110445191 0.9147708735582863 1.0923172318162884 0.748989692524924 1.0363183109460925 0.9443252545952155 0.852898333439644 0.8583093039334353 0.9192717024956237 1.0 17.470851730364302 -6.716039965437535 24.988454513935654 0.895812015916588 0.9367979663295233 0.012309490380868371 0.0944217675373816 485.7053191227211 267337.5422069097 0.034909352278877814 0.02704056031911088 1.9229147668041925e-07 6.716039965437535 0.04098595041293529 GGS(ph)PDLWK ddPTM_KYSE-520_SHP099_60min_R1 6 GGSPDLWK 8 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 GGS(1)PDLWK;GGS(1)PDLWK;GGS(1)PDLWK;GGS(1)PDLWK;GGS(1)PDLWK;GGS(1)PDLWK 135.43 0.00072434 23691600000.0 10887600.0 9586070.0 9119600.0 8782250.0 8956820.0 9394460.0 8635750.0 9017880.0 10697200.0 9126550.0 True False 10283643.124107482 9125540.808215572 9707464.00787592 9616912.399520246 9661670.776665425 9335825.690442005 9508735.886798088 8986599.079069009 8754858.134467438 9045695.867348462 1.1368548395737623 1.0088268434002208 1.0731583451657036 1.0631478816608968 1.0680959119508318 1.032073798118816 1.0511889882481043 0.993466861019198 0.9678479425855075 1.0 23.108800060092946 -7.17041518758897 1.54951575976021 0.9798825127659805 1.0637616511234065 0.5421760676098921 0.03168877553326556 0.3134349641202336 1.386887952062616 0.022595020605958357 0.009393664652554845 6.754369457069047e-08 7.17041518758897 0.083879138357426 GGS(ph)PQMDDIK ddPTM_KYSE-520_SHP099_60min_R1 5 GGSPQMDDIK 10 0 A0A3B3ITG6;A0A3B3IUB1;Q13144 A0A3B3ITG6 EIF2B5 Translation initiation factor eIF-2B subunit epsilon 1 GGS(1)PQMDDIK;GGS(1)PQMDDIK;GGS(1)PQMDDIK;GGS(1)PQMDDIK;GGS(1)PQMDDIK 134.49 0.00041101 3254230000.0 6568300.0 5882070.0 5926300.0 5185250.0 5417780.0 5865300.0 5505060.0 5590100.0 6605800.0 5890710.0 True False 6203943.305418574 5599486.528032931 6308318.780415259 5678054.600997738 5844128.463048536 5828692.48707743 6061565.189008097 5570709.247839145 5406353.238666656 5838522.892303035 1.06258781884666 0.9590587604640161 1.0804648533161632 0.9725156012461913 1.0009601008420967 0.9983162855730917 1.0382018364609138 0.9541298973380836 0.9259796250510364 1.0 22.477171992283402 -7.277142594318103 24.100531309016144 0.9550410536123874 1.0133704366600969 0.29531916510797185 0.03925154003242568 610.9522855589798 937652.3988006559 0.019885942311150772 0.009615490622288609 5.282717728933556e-08 7.277142594318103 0.058329383047709404 GGS(ph)PQMDDIKVFQNEVLGTLQR ddPTM_KYSE-520_SHP099_60min_R1 1 GGSPQMDDIKVFQNEVLGTLQR 22 1 A0A3B3ITG6;A0A3B3IUB1;Q13144 A0A3B3ITG6 EIF2B5 Translation initiation factor eIF-2B subunit epsilon 1 GGS(1)PQMDDIKVFQNEVLGTLQR 119.22 8.2785e-05 222260000.0 211070.0 251780.0 214360.0 152760.0 148840.0 135850.0 94206.0 137440.0 308990.0 131270.0 True False 199361.52634238658 239684.1108705151 228177.98858812643 167278.2644710311 160552.86121624426 135002.10975900115 103729.26184195941 136963.25271873703 252885.20500402863 130107.04992651449 1.5322884229178018 1.8422069442500666 1.7537711347463738 1.2856971591125248 1.2340058536945215 1.0376233250638718 0.7972608855595952 1.0526966278621719 1.9436702711102913 1.0 16.989339611884205 -5.370845910837062 3.168843997926371 1.1586007829978582 1.7264032854094546 0.39663012758709504 0.29296727224327945 0.25912234633317116 4.930461693581304 0.08869289442181591 0.14078673226910207 4.257494436933263e-06 5.370845910837062 0.5678025024115965 GGS(ph)SKDLLDNQSQEEQRR ddPTM_KYSE-520_SHP099_60min_R1 2 GGSSKDLLDNQSQEEQRR 18 2 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 GGS(0.843)S(0.125)KDLLDNQS(0.031)QEEQRR;GGS(0.97)S(0.027)KDLLDNQS(0.004)QEEQRR 106.86 0.00021175 2055550000.0 894080.0 699870.0 678190.0 538120.0 656640.0 628540.0 581480.0 634960.0 818200.0 681980.0 True False 844483.6000957073 666247.1946737125 721907.2125423662 589262.7630083221 708313.8322294723 624617.0487149258 640261.6730979182 632757.4719607776 669635.5051435191 675938.1877724106 1.2493503331698819 0.9856629004337878 1.0680077344371517 0.8717701909256942 1.0478973448204745 0.9240742127225918 0.9472192645424189 0.9361173601480673 0.9906756523852244 1.0 19.3665317974657 -1.3769111208888982 1.0843159089165908 0.9621945612453394 199.997422093318 0.6880276335777163 0.05541106785842018 580.742345935583 1.3039584876654045 0.015503835036449469 286695.30148753687 0.041984489717835506 1.3769111208888982 199.03522753207267 GGS(ph)TEDASQYYCDKNDNGDSYLVLIR ddPTM_KYSE-520_SHP099_60min_R1 3 GGSTEDASQYYCDKNDNGDSYLVLIR 26 1 J3KN34;P26045-2;P26045;P26045-3 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 GGS(0.93)T(0.068)EDAS(0.002)QYYCDKNDNGDSYLVLIR;GGS(0.97)T(0.03)EDASQYYCDKNDNGDSYLVLIR;GGS(0.961)T(0.039)EDASQYYCDKNDNGDSYLVLIR 191.04 1.8206e-15 1211840000.0 309531.0 364030.0 294489.0 288675.0 301041.0 329504.0 321447.0 347225.0 493980.0 348923.0 True False 292360.6983952491 346541.4523798298 313472.2321390599 316110.58520669636 324731.21401101415 327447.44331269735 353941.99978039967 346020.55751792423 404285.6842224344 345831.81367798656 0.8453840474823237 1.002051976347393 0.9064297145055096 0.9140587207544635 0.9389859497234695 0.9468401412531485 1.0234512435861807 1.0005457677185055 1.1690239828510278 1.0 18.39971106558099 -6.931819209328012 1.3787560555087244 1.0716663005797964 0.9232937566750216 0.5474890327552511 0.056002021167375245 0.32415337107317443 1.203169865118644 0.03605918031084835 0.0180364457040316 1.1699863384813973e-07 6.931819209328012 -0.14837254390477483 GGS(ph)WIQEINVAEK ddPTM_KYSE-520_SHP099_60min_R1 5 GGSWIQEINVAEK 13 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 1 GGS(1)WIQEINVAEK;GGS(1)WIQEINVAEK;GGS(1)WIQEINVAEK;GGS(1)WIQEINVAEK;GGS(1)WIQEINVAEK 224.86 1.2919000000000002e-11 923840000.0 1525520.0 1619040.0 1253840.0 1412550.0 1383990.0 1514730.0 1451070.0 1394150.0 1664830.0 1381780.0 True False 1440896.364551276 1541258.8881714134 1334664.5326149315 1546798.3273013553 1492902.1391740786 1505276.008209436 1597758.316678471 1389314.0190470556 1362538.8389490156 1369538.504208574 1.05210358096791 1.1253855831253703 0.974535968513134 1.1294303318585523 1.0900767919897174 1.0991118567194293 1.166639938759356 1.0144395464440843 0.9948890336138425 1.0 20.385258396922683 -7.48819624044494 20.543092587402015 0.9998509700747689 1.0896955718343142 0.41047316058706484 0.04854009729283548 66.75523931815569 39541.218307035124 0.02626982302783326 0.01259317929920301 3.249404365169808e-08 7.48819624044494 0.08984460175954534 GGSDPETTGIQIWSEVFTVEKPGGK ddPTM_KYSE-520_SHP099_60min_R1 1 GGSDPETTGIQIWSEVFTVEKPGGK 25 1 F5H6I7;Q6DD88 F5H6I7 ATL3 Atlastin-3 0 113.73 0.00036969 135850000.0 150570.0 163450.0 140630.0 198610.0 128770.0 142320.0 122470.0 201100.0 173990.0 103140.0 False True 142217.58194614647 155597.61665654814 149695.2348159555 217485.83468572597 138903.4663989233 141431.7280890766 134850.46279201697 200402.43103709267 142397.80193097153 102226.25984170589 1.3912040034171833 1.5220904775102415 1.4643520661692389 2.1274947848282415 1.3587845883632141 1.3835166062817825 1.319137206044989 1.9603811324742728 1.392966955373991 1.0 16.641406317258845 GGSFGGR ddPTM_KYSE-520_SHP099_60min_R1 4 GGSFGGR 7 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ;;; 101.21 0.037217 1604310000.0 934820.0 821430.0 627790.0 662350.0 902090.0 1012800.0 842330.0 740620.0 751390.0 839430.0 False True 882963.67108253 781967.2698084338 668258.3478995145 725299.5448572116 973079.350810009 1006478.7395209161 927480.9367485902 738050.9620820076 614956.517000476 831993.3032666577 1.0612629544201224 0.9398720719724467 0.8032015946230935 0.8717612774158949 1.169575941283908 1.2097197604465995 1.1147697140193547 0.887087623402972 0.7391363783650307 1.0 19.66621239056416 -7.431929727451209 6.868116913625568 0.8513613481852178 1.0189167863236286 0.20366309671512017 0.13388838641226986 0.41645279672603625 26.616681552551146 0.08414890657777359 0.039710324243456094 3.698880259735902e-08 7.431929727451209 0.16755543813841078 GGSFWSSIPAS(ph)PASRPGSFTFPGDSDSLQR ddPTM_KYSE-520_SHP099_60min_R1 1 GGSFWSSIPASPASRPGSFTFPGDSDSLQR 30 1 E7EPJ7;O75962-4;O75962;O75962-5 E7EPJ7 TRIO Triple functional domain protein 1 GGS(0.004)FWS(0.028)S(0.037)IPAS(0.912)PAS(0.017)RPGS(0.002)FT(0.002)FPGDSDSLQR 52.784 0.050912 481590000.0 199930.0 204130.0 198530.0 111150.0 280060.0 228690.0 148940.0 163820.0 206380.0 239030.0 True False 188839.48434942588 194323.28839462312 211327.56145923142 121713.662581534 302099.12867657456 227262.66088175183 163996.30871432213 163251.7466558753 168906.59441642577 236912.3801625257 0.7970857589623597 0.8202327301819948 0.892007253121417 0.5137496930216837 1.2751512963118674 0.9592688264152596 0.6922234650710024 0.6890806911140819 0.7129496326893222 1.0 17.853994064878204 -6.769080314291743 24.969572567582823 0.7476535073084155 0.8760739859347279 0.05639993803816967 0.19454064986669095 468.7540281779654 1531810.0914550198 0.08147836134281168 0.05611144406288908 1.701843756490877e-07 6.769080314291743 0.12842047862631234 GGSFWSSIPASPAS(ph)RPGS(ph)FTFPGDSDSLQR ddPTM_KYSE-520_SHP099_60min_R1 1 GGSFWSSIPASPASRPGSFTFPGDSDSLQR 30 1 E7EPJ7;O75962-4;O75962;O75962-5 E7EPJ7 TRIO Triple functional domain protein 2 GGSFWSS(0.002)IPAS(0.344)PAS(0.654)RPGS(0.564)FT(0.436)FPGDSDSLQR 110.41 0.00025125 104100000.0 133920.0 153060.0 138420.0 137330.0 123460.0 85733.0 50543.0 71152.0 89020.0 81046.0 True False 126491.19063709851 145706.7678522563 147342.7746798308 150381.80191023 133175.59960869048 85197.90854595836 55652.37969214437 70905.19031900166 72856.21201158159 80327.99549283388 1.5746837682310009 1.8138977196966768 1.8342643031964534 1.8720970315217893 1.6578977079114487 1.0606253526338638 0.6928142467728969 0.8826958756281571 0.9069840665709272 1.0 16.293615255458747 -6.293500986426633 2.986763535573707 0.8612275874679527 1.7805611380837698 0.9424793668814365 0.10498582227775413 0.055857184113623115 1.0045375197659907 0.039107783145702756 0.03554303470597386 5.087436641179912e-07 6.293500986426633 0.9193335506158171 GGSGYHS(ph)RS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 1 GGSGYHSRSPAR 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GGS(0.001)GY(0.001)HS(0.999)RS(0.999)PAR 52.823 0.046589 78657000.0 91604.0 100640.0 108150.0 100170.0 84703.0 87042.0 80267.0 85370.0 120570.0 99189.0 True False 86522.54351195332 95805.10333628017 115121.52204611825 109690.12668279132 91368.64420585557 86498.73859140939 88381.17169042895 85073.87139550783 98677.52732235896 98310.26262787437 0.8800967589666593 0.974517825254147 1.1710020802393555 1.1157545891011622 0.929390704119118 0.8798546182185053 0.899002498090874 0.865361042900789 1.0037357716749753 1.0 16.585054407198943 -5.86618367732168 8.06128130587883 0.9178270580647424 1.0404102480891946 0.26689128459134914 0.08455234135072374 0.3139171072648684 21.772605723279515 0.028010651588743288 0.03182535753479516 1.3608690047861387e-06 5.86618367732168 0.12258319002445217 GGSISVQVNSIKFDS(ph)E ddPTM_KYSE-520_SHP099_60min_R1 42 GGSISVQVNSIKFDSE 16 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 GGSISVQVNS(0.064)IKFDS(0.936)E;GGSISVQVNS(0.136)IKFDS(0.864)E;GGSISVQVNS(0.113)IKFDS(0.887)E;GGSISVQVNS(0.285)IKFDS(0.715)E;GGSISVQVNS(0.18)IKFDS(0.82)E;GGSISVQVNS(0.041)IKFDS(0.959)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNS(0.01)IKFDS(0.99)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNS(0.006)IKFDS(0.994)E;GGSISVQVNS(0.008)IKFDS(0.992)E;GGSISVQVNS(0.002)IKFDS(0.998)E;GGSISVQVNS(0.003)IKFDS(0.997)E;GGSISVQVNS(0.202)IKFDS(0.798)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNS(0.065)IKFDS(0.935)E;GGSISVQVNS(0.048)IKFDS(0.952)E;GGSISVQVNS(0.013)IKFDS(0.987)E;GGSISVQVNS(0.007)IKFDS(0.993)E;GGSISVQVNS(0.011)IKFDS(0.989)E;GGSISVQVNS(0.006)IKFDS(0.994)E;GGSISVQVNS(0.002)IKFDS(0.998)E;GGSISVQVNS(0.011)IKFDS(0.989)E;GGSISVQVNS(0.012)IKFDS(0.988)E;GGSISVQVNS(0.063)IKFDS(0.937)E;GGSISVQVNS(0.01)IKFDS(0.99)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNS(0.008)IKFDS(0.992)E;GGSISVQVNS(0.006)IKFDS(0.994)E;GGSISVQVNS(0.001)IKFDS(0.999)E;GGSISVQVNS(0.001)IKFDS(0.999)E;GGSISVQVNS(0.014)IKFDS(0.986)E;GGSISVQVNS(0.013)IKFDS(0.987)E;GGSISVQVNS(0.014)IKFDS(0.986)E;GGSISVQVNS(0.016)IKFDS(0.984)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNS(0.031)IKFDS(0.968)E;GGSISVQVNSIKFDS(1)E;GGSISVQVNS(0.043)IKFDS(0.957)E 255.72 4.541699999999999e-24 9158645000.0 16032275.0 17121258.0 17201492.0 14338011.0 15366494.0 14827498.0 12683241.0 13919614.0 18476998.0 13415245.0 True False 15142932.746202135 16298727.066147823 18310327.6976803 15700691.254559802 16575749.6544091 14734954.085000886 13965386.77678357 13871330.10789634 15122040.930415291 13296396.366202679 1.138874949959604 1.225800330951068 1.3770894905195692 1.1808230457440678 1.2466347420675585 1.1081915489865202 1.0503136633532797 1.0432398167036485 1.1373037110154982 1.0 23.664531958880662 -6.369335922086462 3.0409825722801105 1.0619469220393796 1.2396701881292749 0.6203061986460714 0.0656367981724158 0.1832558716611384 3.2512772383546724 0.025369039037414824 0.022034307971569304 4.272322987510332e-07 6.369335922086462 0.1777232660898953 GGSSVEAPCPSDVT(ph)PEDDRSFQTVWATVFEHHVER ddPTM_KYSE-520_SHP099_60min_R1 6 GGSSVEAPCPSDVTPEDDRSFQTVWATVFEHHVER 35 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 GGSSVEAPCPSDVT(1)PEDDRSFQTVWATVFEHHVER;GGSSVEAPCPS(0.001)DVT(0.999)PEDDRSFQTVWATVFEHHVER;GGSSVEAPCPS(0.004)DVT(0.995)PEDDRSFQTVWATVFEHHVER;GGSSVEAPCPSDVT(1)PEDDRSFQTVWATVFEHHVER;GGSSVEAPCPS(0.026)DVT(0.974)PEDDRSFQTVWATVFEHHVER;GGSSVEAPCPSDVT(1)PEDDRSFQTVWATVFEHHVER 313.22 5.192699999999999e-67 1361250000.0 727023.0 756562.0 809224.0 747896.0 634369.0 641183.0 606066.0 667178.0 877754.0 598816.0 True False 686693.584905581 720215.6258972863 861387.8738441782 818975.8109768678 684290.2312341287 637181.1390622429 667333.0659141563 664863.7152385162 718375.999977688 593510.9561117988 1.1570023734763701 1.2134832870071237 1.4513428353324616 1.379883222951993 1.1529529896415762 1.0735794048968121 1.124382050646512 1.120221469194373 1.210383721783172 1.0 19.178915136456087 -5.888626860640922 5.899296714094771 1.114433896774963 1.3041165798215577 0.5101709693978314 0.0903315410918354 0.18995123276502038 9.15077316833812 0.030061833337024408 0.03426554253953181 1.2923291467325615e-06 5.888626860640922 0.18968268304659475 GGST(ph)EDASQYYCDKNDNGDSYLVLIR ddPTM_KYSE-520_SHP099_60min_R1 1 GGSTEDASQYYCDKNDNGDSYLVLIR 26 1 J3KN34;P26045-2;P26045;P26045-3 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 GGS(0.094)T(0.904)EDAS(0.002)QYYCDKNDNGDSYLVLIR 224.56 2.0443e-21 512890000.0 141960.0 143180.0 133650.0 158940.0 123180.0 147950.0 148130.0 148100.0 216850.0 159410.0 True False 134085.19580975597 136301.4178824386 142265.29284756072 174045.60981294635 132873.56520167284 147026.5891707341 163104.42600948404 147586.2756667997 177475.50634364728 157997.7514191033 0.8486525574283832 0.8626794790318679 0.9004260603063217 1.1015701695100373 0.8409839001392729 0.9305612760319152 1.0323211852353191 0.9341036460405931 1.1232786843458138 1.0 17.269544500943034 -1.429500258906063 0.25757839080733363 1.0271269117494242 8.965714097232789e-09 0.3313882929929113 0.07952543096380144 49.990046253841506 0.8378412857961991 0.09946853642836566 21.51236184083735 0.037196299941494204 1.429500258906063 -1.02712690278371 GGT(ph)LKDDDWGNIK ddPTM_KYSE-520_SHP099_60min_R1 2 GGTLKDDDWGNIK 13 1 P54578-2;P54578 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14 1 GGT(1)LKDDDWGNIK;GGT(1)LKDDDWGNIK 114.29 0.00037424 1069930000.0 1897160.0 1723530.0 1377120.0 1448960.0 1910920.0 2003010.0 1614830.0 1741010.0 1725700.0 1740670.0 True False 1791920.752905303 1640729.0317287275 1465891.3586699048 1586668.7227542922 2061298.5323524973 1990508.471611164 1778072.7756220554 1734970.842664788 1412356.381356845 1725249.018020768 1.038644702409987 0.9510099786122451 0.8496694351703488 0.9196751924974533 1.1947831940905844 1.1537514009975822 1.0306180482061005 1.0056350269105923 0.8186391451925715 1.0 20.71837318114848 -3.902156546126658 16.144162292257253 0.9975037242887312 2.60259297666368 0.013074042552910226 0.11250239912533183 32344962.325877223 54918951.59912669 0.030878919730951162 1861056223.3208416 0.00012526895481008147 3.902156546126658 1.605089252374949 GGT(ph)YPRR ddPTM_KYSE-520_SHP099_60min_R1 1 GGTYPRR 7 1 Q9Y2U5;J3KRN4;J3QRB6;Q99759;Q99759-2 Q9Y2U5;J3KRN4 MAP3K2;MAP3K3 Mitogen-activated protein kinase kinase kinase 2;Mitogen-activated protein kinase kinase kinase 3 1 GGT(0.999)Y(0.001)PRR 64.42 0.063556 430990000.0 222490.0 237240.0 255870.0 197390.0 202960.0 187270.0 187410.0 158770.0 253630.0 169640.0 True False 210148.0361771809 225842.63429549988 272363.7896064748 216149.88625253245 218931.79731556642 186101.17846572073 206355.23174534136 158219.26392719662 207577.1854919954 168137.12157792284 1.2498610313118046 1.3432050708137853 1.6198908786495927 1.2855571941759345 1.3021026841719952 1.1068417058601332 1.227303226133239 0.9410132779861478 1.2345708285233974 1.0 17.35927875465606 -6.132553988884413 1.4607289344524685 1.0903791276266914 1.396635041497437 0.531034918336682 0.12347660522178282 0.3182602076981648 1.3716509223842197 0.052755524539098896 0.05293623867460314 7.369635547555238e-07 6.132553988884413 0.30625591387074547 GGTLGGGTLGPPS(ph)PPGAPS(ph)PPEPGGEIELVFRPHPLLVEK ddPTM_KYSE-520_SHP099_60min_R1 2 GGTLGGGTLGPPSPPGAPSPPEPGGEIELVFRPHPLLVEK 40 1 Q06587;Q06587-2 Q06587 RING1 E3 ubiquitin-protein ligase RING1 2 GGT(0.001)LGGGT(0.003)LGPPS(0.996)PPGAPS(1)PPEPGGEIELVFRPHPLLVEK;GGTLGGGTLGPPS(1)PPGAPS(1)PPEPGGEIELVFRPHPLLVEK 112.45 0.00011194 896360000.0 429280.0 435010.0 432160.0 457660.0 473950.0 458560.0 440060.0 433540.0 515710.0 434070.0 True False 405466.9826515359 414111.46663667756 460017.7250804483 501155.8687995041 511247.16859338206 455697.9569458042 484545.55937172426 432036.150928997 422070.0639911567 430224.47750135005 0.9424544716897554 0.9625474334741404 1.0692504707127102 1.1648706547570424 1.1883265488811658 1.0592097399766711 1.1262621833742683 1.0042109957066339 0.9810461423358513 1.0 18.714730083263834 -13.99917123446281 0.002387356484765587 0.7288666874264033 1.3724523221938598 0.0 0.08219834950244297 10078273.205686865 1817.7923629040909 254059.89935717452 236281.82253292017 1.0019101251407892e-14 13.99917123446281 0.6435856347674566 GGTLGGGTLGPPS(ph)PPGAPSPPEPGGEIELVFRPHPLLVEK ddPTM_KYSE-520_SHP099_60min_R1 2 GGTLGGGTLGPPSPPGAPSPPEPGGEIELVFRPHPLLVEK 40 1 Q06587;Q06587-2 Q06587 RING1 E3 ubiquitin-protein ligase RING1 1 GGTLGGGTLGPPS(1)PPGAPSPPEPGGEIELVFRPHPLLVEK;GGTLGGGT(0.003)LGPPS(0.997)PPGAPSPPEPGGEIELVFRPHPLLVEK 175.49 5.8161999999999994e-11 1347410000.0 726630.0 1005060.0 702610.0 636150.0 675010.0 916190.0 615630.0 805660.0 919650.0 800220.0 True False 686322.3853990063 956775.4089741845 747901.3648157475 696609.5047345286 728129.446718469 910471.7183665748 677863.8883698013 802865.3535024581 752664.7424899015 793130.6733617386 0.865333303136521 1.2063275839765806 0.9429736989564613 0.8783035735863065 0.9180447449248718 1.1479466737901818 0.8546686077549226 1.0122737405924025 0.948979490730929 1.0 19.59719905320341 GGTLKDDDWGNIK ddPTM_KYSE-520_SHP099_60min_R1 1 GGTLKDDDWGNIK 13 1 P54578-2;P54578 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14 0 103.21 0.0010970999999999997 307240000.0 422860.0 410590.0 228240.0 246590.0 396600.0 371860.0 267230.0 325610.0 326520.0 353490.0 False True 399403.11284948897 390864.64009184577 242952.71559691185 270025.8394600133 427810.16365467967 369539.08380553656 294244.21631347056 324480.5349079454 267232.1988993667 350358.3536110587 1.1399845579046077 1.1156138738046306 0.693440624699988 0.7707132901982282 1.2210645450446491 1.0547460335875734 0.8398378782203042 0.9261389990094516 0.7627396240023084 1.0 18.418471769325585 -6.770205174020276 24.9726359960555 0.8760240345870604 0.9903418706448702 0.10896716391232397 0.16244331031862913 515.3089541726719 1468034.328158532 0.0728728164083931 0.049965232236312836 1.6974415396114513e-07 6.770205174020276 0.11431783605780987 GGTPAFLPSSLS(ph)PQSSLPASR ddPTM_KYSE-520_SHP099_60min_R1 3 GGTPAFLPSSLSPQSSLPASR 21 0 Q96JY6;Q96JY6-3;Q96JY6-5;A0A087WVI1;H0YBP7;E5RGS7;B3KPU0 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 GGTPAFLPS(0.027)S(0.02)LS(0.953)PQSSLPASR;GGTPAFLPS(0.001)S(0.02)LS(0.975)PQS(0.003)S(0.001)LPASR;GGTPAFLPSSLS(1)PQSSLPASR 407.94 1.4450999999999996e-107 1542630000.0 1172360.0 1552130.0 1000240.0 848360.0 843100.0 1413510.0 935620.0 1216770.0 1323030.0 1331920.0 True False 1107326.8537582804 1477563.3450053723 1064717.070840586 928987.8793312645 909447.1734171961 1404687.7597750898 1030201.6003712509 1212549.3088662527 1082801.1028721968 1320120.2250180794 0.8388075818951378 1.1192642283661223 0.8065303831141625 0.7037146024473201 0.688912385540295 1.0640604796096145 0.780384680764316 0.9185143033844865 0.8202291597020018 1.0 20.33223789295265 -9.003753767709064 14.640254020708152 1.000019822044916 0.8618421905204852 0.09032898240469656 0.1331300423657619 0.0 0.0 0.13202866202976424 0.03202165406809964 9.913938769602136e-10 9.003753767709064 -0.13817763152443074 GGTTSWGTSGQPS(ph)PSYDSSR ddPTM_KYSE-520_SHP099_60min_R1 1 GGTTSWGTSGQPSPSYDSSR 20 0 H0YNQ5;Q99081;Q99081-3 H0YNQ5 TCF12 Transcription factor 12 1 GGTTSWGT(0.003)S(0.109)GQPS(0.883)PS(0.004)YDSSR 115.02 6.8342e-05 114620000.0 138650.0 129820.0 136310.0 109950.0 128250.0 174230.0 165990.0 196820.0 207880.0 162550.0 True False 130958.80810807724 123583.2523362074 145096.76070371142 120399.61494232707 138342.5453573187 173142.56594266306 182769.88910628657 196137.27735813343 170134.23222834856 161109.93346198654 0.8128537160557926 0.7670740697398807 0.9006071667079834 0.7473134173364614 0.8586841443265835 1.07468585097216 1.1344420867097598 1.2174126892331658 1.0560132983264578 1.0 17.297685922637346 -6.258664164345201 3.1788989411698116 1.1187030215071958 0.8096225443233377 0.8225568865600856 0.06504954580534747 0.0951751730699703 1.992130003241869 0.022870184742489835 0.02132995244769756 5.512337953117511e-07 6.258664164345201 -0.3090804771838581 GGVTGS(ph)PEASIS(ph)GSKGDLK ddPTM_KYSE-520_SHP099_60min_R1 1 GGVTGSPEASISGSKGDLK 19 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 GGVT(0.017)GS(0.983)PEAS(0.036)IS(0.612)GS(0.353)KGDLK 124.81 1.4350999999999999e-05 1033200000.0 2331800.0 2123700.0 1795800.0 1796400.0 1984100.0 1840900.0 1470800.0 1275200.0 1591100.0 1472500.0 True False 2202450.4056719444 2021674.2642613135 1911560.1413815927 1967129.3158926482 2140237.382015254 1829410.2602528194 1619482.8176247163 1270776.6288339181 1302196.3483669676 1459454.7955876635 1.5090912115473274 1.3852256817911697 1.3097768750089205 1.3478521718108882 1.4664636331908223 1.2534888136197393 1.1096491803109365 0.870720102243542 0.8922484973867421 1.0 20.476998095552172 -6.836444342779958 1.8912578487194658 0.9106233884135887 1.3934712310876698 0.9067272662000516 0.06738557732564489 0.09580372459703898 0.69693069896025 0.037194419555835086 0.02200881008920571 1.4573224566300259e-07 6.836444342779958 0.4828478426740811 GGVTGS(ph)PEASISGS(ph)KGDLK ddPTM_KYSE-520_SHP099_60min_R1 3 GGVTGSPEASISGSKGDLK 19 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 GGVT(0.072)GS(0.928)PEAS(0.07)IS(0.318)GS(0.612)KGDLK;GGVT(0.122)GS(0.878)PEAS(0.002)IS(0.212)GS(0.786)KGDLK;GGVT(0.01)GS(0.99)PEASIS(0.333)GS(0.666)KGDLK 169.6 5.2698e-09 5726400000.0 8510400.0 6988800.0 6206000.0 6414600.0 7140600.0 6025800.0 5463600.0 4878900.0 5665500.0 4697400.0 True False 8038311.146938209 6653047.5575973345 6606048.689951076 7024241.655380181 7702524.595543632 5988190.7470429875 6015914.007597485 4861976.234643821 4636788.015632618 4655784.6905219 1.7265212378275032 1.4289852301678383 1.4188905048378768 1.508712735294635 1.6543987979564843 1.286182919762926 1.2921375036617337 1.0442871734471912 0.9959197694584214 1.0 22.150592910839542 -6.927700386864213 1.2510129626657103 0.9857730373885318 1.5306793352191232 0.8312269778422201 0.10206890903384323 0.18897735519859757 0.571685259559775 0.07407179538757444 0.0366274894156689 1.1811352017927917e-07 6.927700386864213 0.5449062978305914 GGVTGS(ph)PEASISGSK ddPTM_KYSE-520_SHP099_60min_R1 13 GGVTGSPEASISGSK 15 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVTGS(1)PEASISGSK;GGVT(0.001)GS(0.999)PEASISGSK;GGVT(0.004)GS(0.996)PEASISGSK;GGVTGS(1)PEASISGSK;GGVTGS(1)PEASISGSK;GGVTGS(1)PEASISGSK;GGVTGS(1)PEASISGSK;GGVTGS(1)PEASISGSK;GGVTGS(0.999)PEAS(0.001)ISGSK;GGVTGS(1)PEASISGSK;GGVTGS(1)PEASISGSK;GGVTGS(1)PEASISGSK;GGVT(0.002)GS(0.998)PEASISGSK 374.16 5.2315999999999995e-68 90975800000.0 49044110.0 54363850.0 41913830.0 39464760.0 40156490.0 52906710.0 45346200.0 56098020.0 60653120.0 51169670.0 True False 46323535.45129064 51752129.04419757 44615662.546299085 43215478.924887255 43316577.30382626 52576499.598142385 49930236.43226395 55903429.06199627 49640042.34872949 50716346.53320088 0.9133847096214918 1.0204230505901803 0.8797097108935469 0.8521015782672108 0.8540949864255216 1.0366775840945832 0.984499867307628 1.1022763444799741 0.9787779629637399 1.0 25.595947485629768 -6.27368503912778 24.946099861488907 1.0245919751226873 0.9061875803321255 0.5304917884551803 0.05471155790611816 636.0753903649576 1295769.9936609054 0.020328643530727008 0.018056506491874715 5.324942970234006e-07 6.27368503912778 -0.11840439479056175 GGVTGSPEASISGS(ph)KGDLK ddPTM_KYSE-520_SHP099_60min_R1 3 GGVTGSPEASISGSKGDLK 19 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GGVTGSPEAS(0.038)IS(0.253)GS(0.709)KGDLK;GGVTGSPEASIS(0.001)GS(0.999)KGDLK;GGVTGSPEASIS(0.084)GS(0.916)KGDLK 266.46 2.1414e-35 4022500000.0 3074990.0 2785470.0 2314680.0 2138951.0 2327116.0 2135949.0 1668087.0 1695826.0 2085120.0 2209794.0 True False 2904414.174859407 2651651.8401242876 2463887.976418944 2342236.2599409297 2510246.789721184 2122617.750000949 1836713.5129202877 1689943.5754147633 1706514.7695977222 2190216.9443537192 1.3260851544167147 1.210679995404166 1.1249515637118672 1.069408336913432 1.1461178748491045 0.9691358454115525 0.8385988966322503 0.7715872985876407 0.7791533044235825 1.0 21.062642347388955 -6.164342845157726 0.8947138801111636 0.8148273658197134 1.2272784630505362 0.7735888166665031 0.08443622842694617 0.26689755005788607 0.4636671050673129 0.05151266072111435 0.05280246531495026 6.849472949215741e-07 6.164342845157726 0.41245109723082285 GGVVGIK ddPTM_KYSE-520_SHP099_60min_R1 2 GGVVGIK 7 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ; 103.41 0.033426 1505760000.0 1853260.0 2216900.0 1698230.0 1332700.0 2084900.0 2404500.0 1814700.0 2068300.0 2082500.0 2222500.0 False True 1750455.9734177836 2110396.7963652574 1807700.6230640728 1459359.4073091347 2248969.768541707 2389492.6235960107 1998147.585765276 2061125.5500448472 1704370.4955528956 2202810.3790788357 0.7946466886313581 0.9580474181566987 0.8206337868355293 0.6624988792359899 1.0209547720953513 1.0847473056647032 0.907090144818028 0.935679970287212 0.7737254698543884 1.0 21.070913880551483 -5.790432341403458 24.99980442616167 0.9547055143895747 0.8204398475716401 0.3250868767500712 0.1016272710425995 287.2119549258407 247653.20502632603 0.033309589890031716 0.03777538881499137 1.620196384112653e-06 5.790432341403458 -0.13426566681793461 GGYFDEFGIIR ddPTM_KYSE-520_SHP099_60min_R1 1 GGYFDEFGIIR 11 0 P11413;P11413-3;P11413-2;E7EM57;E7EUI8 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 94.69200000000001 0.017754 82687000.0 100060.0 92866.0 70442.0 56051.0 101150.0 88724.0 84124.0 80666.0 84201.0 78855.0 False True 94509.47233533519 88404.57796529226 74982.80403118498 61378.07018765235 109109.92953522642 88170.2406055033 92628.07489112158 80386.18847358592 68912.22093447755 78156.40604826163 1.2092351364899703 1.1311238890731794 0.9593942176010888 0.7853236003425151 1.3960458912075737 1.1281255761819207 1.185162926170424 1.0285297461598655 0.8817219780029829 1.0 16.254076507352657 -7.5287938366051765 6.692589617330424 0.9439606794051759 1.1072004038459615 0.17053864520548423 0.1527804892339105 0.26926597661648666 62.651902271270345 0.1034956687061579 0.04135704234789817 2.95941699432499e-08 7.5287938366051765 0.1632397244407856 GHAVGDIPGVR ddPTM_KYSE-520_SHP099_60min_R1 1 GHAVGDIPGVR 11 0 D6RD47;P62266 D6RD47 RPS23 40S ribosomal protein S23 0 129.89 7.1017e-05 0.0 171880.0 162280.0 118130.0 125370.0 152620.0 150130.0 127600.0 150130.0 138300.0 120980.0 False True 162345.47376571453 154483.825212754 125744.84881468279 137285.1271061352 164630.32571098625 149192.98298210397 140499.0532559922 149609.23407060528 113188.20625928708 119908.21132101562 1.353914564959082 1.2883506768287394 1.0486758782352399 1.144918480508382 1.3729695731199056 1.2442265741308391 1.1717217003583786 1.247697988506181 0.9439570902801819 1.0 16.87157093240894 -7.760098747212352 24.992316501112686 0.9719784481356623 1.2296096575055049 0.5640235133904756 0.09210113880904956 26.393708727307548 492118.33752488927 0.07491686790772353 0.02476737457892403 1.7374057431863e-08 7.760098747212352 0.25763120936984263 GHDDDLTPLEGS(ph)LEEMKEAVGLK ddPTM_KYSE-520_SHP099_60min_R1 1 GHDDDLTPLEGSLEEMKEAVGLK 23 1 Q8NEM0-2;Q8NEM0-3;Q8NEM0 Q8NEM0-2 MCPH1 Microcephalin 1 GHDDDLTPLEGS(1)LEEMKEAVGLK 103.21 0.0008105 37414000.0 156090.0 170010.0 175480.0 156430.0 156680.0 140840.0 124280.0 149680.0 208380.0 150510.0 True False 147431.37654229943 161842.46440978727 186791.7215779273 171297.0601676054 169009.82461274622 139960.96531805466 136843.4352559149 149160.79501557472 170543.44483232265 149176.598495008 0.9883009669725982 1.0849051797839668 1.2521516341195973 1.1482837247648978 1.1329513229141093 0.9382233321450769 0.9173250807196425 0.9998940619400583 1.1432318912810555 1.0 17.186661710545078 -6.246930387025892 24.33907610251126 0.9945776414695401 1.1280621817206502 0.3481287114966045 0.08278058554962016 653.7997277739603 1096759.9517939829 0.029288113687774203 0.02915308790936323 5.663300586931712e-07 6.246930387025892 0.13348454025111012 GHDDLGDHYLDCGDLSNALK ddPTM_KYSE-520_SHP099_60min_R1 2 GHDDLGDHYLDCGDLSNALK 20 0 C9JFE4;A0A096LP07;A0A096LPJ3;A8K070;Q13098-5;Q13098;Q13098-7;J3QLT0;J3KSA5;J3KRJ4;Q13098-6 C9JFE4 GPS1 COP9 signalosome complex subunit 1 0 ; 172.2 5.1e-09 1275210000.0 1275610.0 1539940.0 1074040.0 1742860.0 1354580.0 1321290.0 1161710.0 1295390.0 1118630.0 1188160.0 False True 1204849.3704345087 1465958.9709029344 1143274.3369247601 1908500.8903900322 1461177.7394940888 1313043.3390023613 1279146.9839970144 1290896.5944362995 915514.9903675074 1177633.8267744915 1.0231103616771606 1.2448342919277022 0.9708232821879437 1.6206233610131315 1.240774259598348 1.1149843942567046 1.0862009522098772 1.09617825599663 0.7774190665659454 1.0 20.167459586914365 -7.189388234306208 1.350972048773236 0.9129141378470539 1.218439963940666 0.2988116645599451 0.17681576563082596 0.5801274911087094 1.9104303751518086 0.1438107882372398 0.057980667249215107 6.465643659434911e-08 7.189388234306208 0.3055258260936121 GHDLNEDGLVSWEEYK ddPTM_KYSE-520_SHP099_60min_R1 7 GHDLNEDGLVSWEEYK 16 0 O43852;O43852-3;O43852-5;O43852-6;O43852-10;O43852-13;O43852-14;O43852-11 O43852 CALU Calumenin 0 ;;;;;; 159.69 1.1676999999999999e-07 7072560000.0 6332550.0 5863370.0 3617460.0 3954600.0 5872070.0 6399000.0 4960140.0 5201870.0 4576640.0 5492140.0 False True 5981270.827874539 5581684.904102205 3850647.2597406465 4330443.995006161 6334168.501492018 6359061.467411466 5461559.3575013885 5183825.927095582 3745637.543705741 5443483.912420259 1.0987946183192028 1.0253883347329487 0.7073865417246339 0.7955280229864364 1.163623995845658 1.168196980044739 1.0033205655370612 0.952299301421242 0.6880956394781318 1.0 22.3760988631525 -7.5430227409124875 24.628799976114326 0.8360975454226277 0.9893736219359258 0.12654763824739412 0.15545640091533897 456.3942806858051 557991.8638286674 0.11330567124941116 0.042836781056009667 2.8640279972083234e-08 7.5430227409124875 0.1532760765132981 GHFEEEK ddPTM_KYSE-520_SHP099_60min_R1 1 GHFEEEK 7 0 A0A087WY61;Q14980-2;Q14980;Q14980-4;Q14980-3;F5H6Y5;F5H4J1 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 0 104.21 0.0049669 0.0 290370.0 310890.0 236860.0 214870.0 322840.0 302510.0 245050.0 294490.0 299040.0 293310.0 False True 274262.5972617558 295954.3777445964 252128.37458939932 235291.18019697868 348245.67129167094 300621.9228796128 269822.0454575308 293468.48292448296 244741.8741849404 290711.50159172725 0.9434184604327346 1.0180346361398256 0.8672803559849732 0.8093631621339138 1.197908130173481 1.0340902277124338 0.9281436887779783 1.0094835646944151 0.8418720031540197 1.0 18.149228625240504 -3.919146155851096 13.235602713957672 0.9684193710446523 0.6498789697859562 0.0043641112024706 0.10737195926500065 2249190.015908804 8735345.488618493 0.02743271868099529 19645312.26754213 0.00012046304702858781 3.919146155851096 -0.3185404012586961 GHFFVEDQIYCEK ddPTM_KYSE-520_SHP099_60min_R1 1 GHFFVEDQIYCEK 13 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 0 194.12 3.2208e-08 2502300000.0 3278800.0 2720900.0 1836100.0 2072900.0 3011700.0 2635000.0 2355700.0 2364900.0 2118000.0 2346800.0 False True 3096918.427874247 2590183.879845837 1954457.943863872 2269907.7927598916 3248703.655771051 2618553.9875963763 2593837.1454164656 2356696.713871808 1733424.59043507 2326009.17778277 1.3314300121663036 1.113574230311029 0.8402623525875023 0.9758808410737416 1.3966856566180124 1.1257711330668394 1.1151448455972983 1.013193213673512 0.7452354904667352 1.0 21.149425358618352 -7.529693285806861 4.668543402932803 0.8700405874780859 1.1186080207031437 0.289924379948454 0.15925374621953028 0.25665281142142504 14.99174483999487 0.11415245763796562 0.04395748581471717 2.9532942116341397e-08 7.529693285806861 0.2485674332250578 GHKHEDGTQS(ph)DSEDPLAK ddPTM_KYSE-520_SHP099_60min_R1 7 GHKHEDGTQSDSEDPLAK 18 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 GHKHEDGT(0.004)QS(0.996)DSEDPLAK;GHKHEDGT(0.011)QS(0.973)DS(0.016)EDPLAK;GHKHEDGT(0.025)QS(0.975)DSEDPLAK;GHKHEDGT(0.037)QS(0.963)DSEDPLAK;GHKHEDGT(0.038)QS(0.953)DS(0.009)EDPLAK;GHKHEDGT(0.095)QS(0.899)DS(0.006)EDPLAK;GHKHEDGT(0.176)QS(0.822)DS(0.001)EDPLAK 220.86 1.3406e-18 10660270000.0 4974529.0 4810470.0 4694966.0 5309560.0 4420389.0 4425317.0 4335736.0 4733340.0 5316450.0 3749158.0 True False 4698581.959892291 4579367.80053732 4997611.020571199 5814178.986022582 4768248.465727044 4397696.955115005 4774034.507585609 4716921.148309866 4351116.696798173 3715943.37692079 1.2644385242989795 1.2323567223814926 1.3449104342145441 1.5646575838947503 1.2831865241386549 1.1834671600295346 1.2847436097214175 1.2693737955228301 1.1709319156536013 1.0 21.825297087606106 -8.195966317463492 0.5826511669169785 0.9933564659273915 1.3312575419489592 0.5170191094712632 0.09412591053627259 1.0075590259978173 0.7538991563074997 0.11712805563454283 0.04768342427216762 6.368449107137986e-09 8.195966317463492 0.3379010760215677 GHLENNPALEK ddPTM_KYSE-520_SHP099_60min_R1 4 GHLENNPALEK 11 0 F8VWS0;Q8NHW5;P05388;P05388-2;F8VW21;F8VZS0;F8VU65;F8VS58;F8VQY6;F8VRK7;G3V210;F8VWV4;F8VPE8 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 0 ;;; 193.73 1.1073e-06 3736500000.0 7276730.0 7496700.0 5204030.0 4595790.0 7000180.0 7523090.0 5623120.0 6774020.0 6149460.0 6276280.0 False True 6873075.281098382 7136547.279223891 5539490.100542397 5032572.499825352 7551054.340424131 7476135.6047614645 6191559.845962656 6750522.505688157 5032873.079271413 6220677.042071945 1.104875761048855 1.1472299929666328 0.8904963339323814 0.8090071974141795 1.2138637465591802 1.2018202446773156 0.9953192882523296 1.085174886918697 0.8090555168244348 1.0 22.568640177346204 -7.74548439811622 24.88645870787199 0.9045277090790086 1.0533699868267332 0.1789614177989023 0.12965748907970148 368.405401800053 574641.6759573049 0.09396007599144211 0.03525842922411255 1.796865630809869e-08 7.74548439811622 0.14884227774772463 GHLS(ph)EGLVTK ddPTM_KYSE-520_SHP099_60min_R1 4 GHLSEGLVTK 10 0 Q16659 Q16659 MAPK6 Mitogen-activated protein kinase 6 1 GHLS(1)EGLVTK;GHLS(1)EGLVTK;GHLS(1)EGLVTK;GHLS(1)EGLVTK 150.49 0.00010174 1798960000.0 2491310.0 2171980.0 2068910.0 2089210.0 2151810.0 2364070.0 2075560.0 2339690.0 2583930.0 1974850.0 True False 2353112.067996639 2067634.8205915554 2202275.2489730446 2287767.890256109 2321145.2048758864 2349314.9622227587 2285377.860313539 2331574.1614777506 2114753.4475745484 1957354.3654100497 1.2021901141562996 1.056341588999089 1.1251285346645374 1.1688061858828718 1.1858584454070613 1.200250196765263 1.1675851346594417 1.191186533558171 1.080414198341405 1.0 20.900473538849756 -7.997343321226835 4.170122750609182 1.0003180070125959 1.1594866813557243 0.6087295468121471 0.04155442287554502 0.1249800575315093 6.082045965851836 0.04274707645130866 0.01121848678102314 1.0061359773949492e-08 7.997343321226835 0.15916867434312842 GHPHSAS(ph)SPSER ddPTM_KYSE-520_SHP099_60min_R1 1 GHPHSASSPSER 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 GHPHS(0.001)AS(0.493)S(0.493)PS(0.013)ER 100.4 0.0017619 275720000.0 64466.0 151000.0 220120.0 276320.0 65810.0 114700.0 59731.0 60223.0 68949.0 113290.0 True False 60889.942470215035 143745.7333443791 234309.28740445277 302581.36972136254 70988.87259232083 113984.11475419528 65769.19239838306 60014.100469153855 56429.59966284589 112286.33873828617 0.5422738255998852 1.2801711673885603 2.0867123288307963 2.694730036808936 0.6322129066633804 1.0151200585484066 0.5857274637093302 0.5344737493759862 0.5025508917373325 1.0 16.776822888075387 -5.8635172929863835 23.783020492366678 0.6972318423768579 1.6570301129676825 0.42017177936326133 0.5403699037520924 8.358011612658709 1929.2689778584154 0.1802270599369301 0.20435839965933011 1.3692498657304392e-06 5.8635172929863835 0.9597982705908247 GHPHSASS(ph)PSER ddPTM_KYSE-520_SHP099_60min_R1 2 GHPHSASSPSER 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 GHPHSAS(0.072)S(0.636)PS(0.292)ER;GHPHSAS(0.311)S(0.482)PS(0.207)ER 132.51 3.6722e-05 390976000.0 59116.0 121836.0 146283.0 195908.0 54058.0 89273.0 55173.0 59331.0 69494.0 71005.0 True False 55836.717635175664 115982.81568043554 155712.6362410755 214527.03741811193 58312.05705205408 88715.814092862 60750.42527658982 59125.19460895954 56875.64140117782 70375.95094105402 0.7934062259697744 1.648046159654471 2.212583050870579 3.048300371781789 0.8285793125679467 1.2605984417485059 0.863227060725241 0.8401335089380466 0.808168708779738 1.0 16.102794891004113 -5.861695478080395 23.07282090055532 0.9382545359379049 1.928363136008696 0.4528618112698015 0.5342107565973032 7.025373607584044 1603.5420752373823 0.1758159097725267 0.19935663138568743 1.3750057741145461e-06 5.861695478080395 0.990108600070791 GHPHSASSPS(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 5 GHPHSASSPSER 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 GHPHSAS(0.027)S(0.08)PS(0.893)ER;GHPHSAS(0.197)S(0.148)PS(0.654)ER;GHPHSAS(0.244)S(0.244)PS(0.512)ER;GHPHS(0.017)AS(0.115)S(0.115)PS(0.753)ER;GHPHS(0.016)AS(0.181)S(0.181)PS(0.622)ER 150.05 1.2485999999999999e-05 514444000.0 115987.6 228774.3 293509.3 407960.2 133047.9 166198.1 131616.9 108234.09999999999 140127.90000000002 150603.2 True False 109553.53661245166 217783.63923077463 312429.37910948426 446732.6147502938 143518.01279100188 165160.79600984495 144922.02070915833 107858.66116912886 114684.20569689629 149268.9728155165 0.733933747556837 1.459001392740448 2.093063100900546 2.9928029001875465 0.961472502181533 1.1064643434906556 0.9708783947235262 0.7225792415844705 0.7683057204301662 1.0 17.187554791167944 -5.94916528911213 24.999999107506966 0.9147760621534585 1.8339230409393033 0.4032465798394893 0.5353734171310902 113.53197797858665 55833.26846614887 0.17816328937618703 0.20201814808953683 1.124177039473885e-06 5.94916528911213 0.9191469787858447 GHQLLEEVTQGDMSAADTFLS(ph)DLPR ddPTM_KYSE-520_SHP099_60min_R1 4 GHQLLEEVTQGDMSAADTFLSDLPR 25 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 GHQLLEEVTQGDMSAADTFLS(1)DLPR;GHQLLEEVTQGDMSAADTFLS(1)DLPR;GHQLLEEVTQGDMSAADT(0.01)FLS(0.99)DLPR;GHQLLEEVTQGDMSAADT(0.003)FLS(0.997)DLPR 217.1 2.0371e-21 84873000.0 58695.6 60474.0 58674.9 55271.0 50378.7 54270.4 49549.4 57673.2 69657.2 46871.4 True False 55439.63806122227 57568.73826667543 62457.17793715936 60523.93922216792 54343.21707440746 53931.67830301729 54558.33690754281 57473.14513022607 57009.20839511508 46456.155861397405 1.1933754963847463 1.2392058102791064 1.344432762011158 1.30281849842983 1.1697742972221208 1.1609156483787253 1.1744048963138143 1.237148103723821 1.2271615534699611 1.0 15.503582158983555 -5.770636189832172 24.851864532484974 1.1740340885334173 1.2730811631763 0.349105326424602 0.07124608453087669 225.18735842128655 608504.9577182813 0.021957278371822965 0.025247460261915194 1.6957577484432885e-06 5.770636189832172 0.09904707464288265 GHQQLYWS(ph)HPR ddPTM_KYSE-520_SHP099_60min_R1 1 GHQQLYWSHPR 11 0 A0A2R8Y851;P62273;P62273-2 A0A2R8Y851 RPS29 40S ribosomal protein S29 1 GHQQLYWS(1)HPR 110.55 0.00020149 390180000.0 842150.0 808630.0 617270.0 545860.0 512340.0 749950.0 554010.0 654260.0 771720.0 744100.0 True False 795434.2607155963 769782.2010216244 657060.2118669205 597738.3702812068 552658.2431841609 745269.2838701715 610014.7374165537 651990.5247654316 631595.1014780703 737507.8529010395 1.078543445451732 1.0437613619890709 0.8909196143231932 0.8104840754304655 0.7493591302251772 1.0105238621373343 0.8271298197260102 0.8840455355163753 0.8563910187446087 1.0 19.492298885535696 -4.752331678181934 3.8782207442813785 0.8687459675626579 1.0701754155028218 0.48333214574637995 0.07563781992416521 0.16281831591139245 5.324456370630311 0.019524911848593236 0.05243333186460635 1.7687576116829348e-05 4.752331678181934 0.20142944794016393 GHQQLYWSHPR ddPTM_KYSE-520_SHP099_60min_R1 2 GHQQLYWSHPR 11 0 A0A2R8Y851;P62273;P62273-2 A0A2R8Y851 RPS29 40S ribosomal protein S29 0 ; 128.03 0.00083792 1154600000.0 416630.0 331390.0 360860.0 299215.0 550280.0 380200.0 380190.0 329630.0 341960.0 308058.0 False True 393518.703368686 315469.52697346895 384121.6129964144 327652.30363773025 593583.90533509 377827.030771971 418623.31549683196 328486.5904662206 279868.68411009276 305328.8457854973 1.2888356563766818 1.0332123260803723 1.258058707189007 1.073112836079418 1.9440806642687818 1.237442960228546 1.3710572102019063 1.0758452566810288 0.9166139654774346 1.0 18.220004368291416 -7.424135988891117 3.715963579816537 0.96453900117072 1.3135485626260208 0.28470839637611745 0.23488251966170579 0.33255244594073846 8.27243898449544 0.15533724791200915 0.06530490092802187 3.7658586169817566e-08 7.424135988891117 0.3490095614553008 GHREEEQEDLTK ddPTM_KYSE-520_SHP099_60min_R1 1 GHREEEQEDLTK 12 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 0 64.55 0.031262 20637000.0 25861.0 25140.0 18539.0 18977.0 27644.0 26274.0 20697.0 22423.0 23611.0 21740.0 False True 24426.438777374606 23932.23666409067 19734.053603448792 20780.5683743569 29819.425527155716 26110.014220154557 22789.254743254507 22345.219846567554 19323.83758487368 21547.400513464072 1.1336141806113245 1.1106786013067522 0.9158438202843914 0.9644118491867262 1.383898976979743 1.2117477560153718 1.057633598494373 1.0370262451196819 0.8968059777233462 1.0 14.395226212086936 -7.389645095244898 2.4636027228414097 0.9529884777906662 1.114050737135954 0.21510960137095758 0.12382970644584274 0.5367787907043735 6.116060093862276 0.10031467242111121 0.03822999277426718 4.077133243787565e-08 7.389645095244898 0.16106225934528784 GHRPVS(ph)PAPGASGLRPCLWQLETELR ddPTM_KYSE-520_SHP099_60min_R1 2 GHRPVSPAPGASGLRPCLWQLETELR 26 2 Q13129 Q13129 RLF Zinc finger protein Rlf 1 GHRPVS(1)PAPGASGLRPCLWQLETELR;GHRPVS(1)PAPGASGLRPCLWQLETELR 112.26 0.00026136 933930000.0 73138.0 84015.0 64442.3 93670.0 77025.0 86131.0 86054.0 82165.0 110999.0 54028.8 True False 69080.88934301157 79978.79329091398 68596.35376932562 102572.36863708754 83086.42928769965 85593.42448032778 94753.1781261062 81879.98879245514 90844.3796570832 53550.14686577033 1.2900224067764157 1.4935307925744838 1.280974148236612 1.9154451414334512 1.551563051656337 1.5983788932433305 1.7694289123728466 1.529033879173046 1.6964356771008529 1.0 15.70860291124259 -5.209216707898634 24.99992578702988 1.6095534229503632 1.3687112122004987 0.15658929014239875 0.23187817192706991 548.7751488138507 262707.4094960186 0.05784951720812104 0.10019820860185433 6.177080940649668e-06 5.209216707898634 -0.24084221074986445 GHS(ph)CYRPR ddPTM_KYSE-520_SHP099_60min_R1 1 GHSCYRPR 8 1 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 1 GHS(1)CYRPR 61.593 0.039603 0.0 79427.0 73690.0 67798.0 61544.0 75247.0 67585.0 54201.0 71714.0 63919.0 57835.0 True False 75021.02597620091 70149.821789055 72168.36756063551 67393.12325612169 81168.5108031357 67163.17694561723 59680.166030783985 71465.24087217351 52312.920866864624 57322.62689494914 1.3087506633931185 1.223771930717922 1.2589857002347962 1.1756809990517005 1.4159942626475772 1.1716695584921837 1.0411275488151532 1.2467195720660618 0.9126050863428602 1.0 15.806817104318348 -7.206896907961594 0.8699183825323081 0.9844839035225594 1.267502465504004 0.5394064844392485 0.09786750427554904 0.4849619058907705 0.6676688192625613 0.0857452382445907 0.03770297525013282 6.210164324920314e-08 7.206896907961594 0.2830185619814445 GHS(ph)PFTLRPK ddPTM_KYSE-520_SHP099_60min_R1 2 GHSPFTLRPK 10 1 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 GHS(0.984)PFT(0.016)LRPK;GHS(1)PFTLRPK 138.42 0.0001699 1114640000.0 903340.0 887890.0 895850.0 853890.0 915930.0 1102500.0 1222070.0 1342750.0 1649440.0 1271820.0 True False 853229.9294363555 845234.4316499393 953597.9244106795 935043.4488686101 988008.4800711804 1095618.88854839 1345608.7618538449 1338092.313650206 1349943.274998687 1260552.664260988 0.6768697204226453 0.6705268693755582 0.7564919352018793 0.7417726171851685 0.7837899265005407 0.8691575684310723 1.0674752432043146 1.0615124235485047 1.0709138247628116 1.0 20.2656249627138 -6.450802028106545 1.5113261738605 1.0631447731559076 0.7107072359086273 0.945982381352306 0.036511481830122317 0.08333204539682429 0.38323759737459495 0.01832356466666952 0.014290170329925475 3.5415874654095584e-07 6.450802028106545 -0.35243753724728033 GHSGT(ph)TASGGENEREDLEQEWKPPDEELIKK ddPTM_KYSE-520_SHP099_60min_R1 2 GHSGTTASGGENEREDLEQEWKPPDEELIKK 31 3 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 GHS(0.073)GT(0.309)T(0.309)AS(0.309)GGENEREDLEQEWKPPDEELIKK;GHS(0.072)GT(0.321)T(0.287)AS(0.321)GGENEREDLEQEWKPPDEELIKK 85.20299999999999 0.0025514 910030000.0 229320.0 240040.0 226470.0 261500.0 254120.0 199545.0 198280.0 237970.0 272740.0 202218.0 True False 216599.1624619136 228508.1180926143 241068.6185648119 286352.8813771582 274117.79825498513 198299.56563754065 218324.0774263176 237144.53761261524 223217.29121589282 200426.50584322322 1.0806912067376002 1.140109274126432 1.2027781333142613 1.4287176248093052 1.367672389945292 0.9893879295219251 1.089297428540186 1.1831994806021986 1.113711433908332 1.0 17.61271378795948 -6.266600856478263 24.999438250322584 1.0874553610304982 1.246195050872387 0.3786072602222337 0.10757665635983381 576.1897853864491 2790748.2392590605 0.041777467058074204 0.03792036246635528 5.412515381043222e-07 6.266600856478263 0.1587396898418887 GHTDTEGRPPS(ph)PPPT(ph)STPEK ddPTM_KYSE-520_SHP099_60min_R1 5 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 2 GHT(0.008)DT(0.42)EGRPPS(0.573)PPPT(0.382)S(0.344)T(0.274)PEK;GHT(0.003)DT(0.104)EGRPPS(0.893)PPPT(0.435)S(0.3)T(0.265)PEK;GHT(0.001)DT(0.017)EGRPPS(0.982)PPPT(0.787)S(0.131)T(0.082)PEK;GHT(0.004)DT(0.039)EGRPPS(0.957)PPPT(0.582)S(0.348)T(0.071)PEK;GHTDT(0.015)EGRPPS(0.983)PPPT(0.375)S(0.332)T(0.294)PEK 107.9 0.00013368 6067600000.0 2640320.0 2676010.0 2457660.0 2516510.0 2534796.0 2678590.0 2433740.0 2495000.0 2921690.0 2617220.0 True False 2493856.1862525716 2547450.4628271004 2616084.6959950356 2755678.353783678 2734270.024183626 2661871.9262374896 2679766.190213467 2486345.4273373787 2391184.745811254 2594033.4669663473 0.9613816544815321 0.9820422501357607 1.0085007496277512 1.0623141100050533 1.0540611981314494 1.0261517286245645 1.0330499680666734 0.9584862566345734 0.9218018102934039 1.0 21.30676566198816 -1.3703546891781855 14.242206998403622 1.0041104288674494 0.07371286684041167 0.0 0.04290834495816818 0.0 0.0 0.01082869262226536 0.0 0.0426231272675326 1.3703546891781855 -0.9303975620270377 GHTDTEGRPPS(ph)PPPTS(ph)TPEK ddPTM_KYSE-520_SHP099_60min_R1 4 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 2 GHT(0.011)DT(0.047)EGRPPS(0.931)PPPT(0.07)S(0.565)T(0.376)PEK;GHT(0.001)DT(0.024)EGRPPS(0.975)PPPT(0.042)S(0.764)T(0.195)PEK;GHT(0.001)DT(0.015)EGRPPS(0.984)PPPT(0.121)S(0.558)T(0.321)PEK;GHTDT(0.001)EGRPPS(0.999)PPPT(0.163)S(0.509)T(0.328)PEK 151.47 1.2911000000000002e-06 5030940000.0 2170100.0 1969980.0 1797440.0 2042140.0 2072480.0 2014400.0 1877090.0 1983220.0 2292830.0 2021280.0 True False 2049720.2270129032 1875339.2037997358 1913305.8584056844 2236224.3716082196 2235572.3852018407 2001827.3823962607 2066844.5758329984 1976340.6727070299 1876509.8695407186 2003373.0317320428 1.0231345808028525 0.9360908697959193 0.955042235320254 1.116229646794667 1.1159042024585142 0.9992284765187012 1.031682339282605 0.9865065773588647 0.9366752171553179 1.0 20.933999647949875 -9.996565863654977 11.593399559122561 1.000000225202503 1.0130049054115475 0.0021651391375498985 0.061391108571745276 0.0 0.0 0.06499231439420217 0.015762951594155687 1.0079387371399821e-10 9.996565863654977 0.013004680209044439 GHTDTEGRPPS(ph)PPPTST(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 1 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 2 GHT(0.021)DT(0.016)EGRPPS(0.925)PPPT(0.041)S(0.147)T(0.849)PEK 121.86 0.00081005 1528400000.0 564960.0 513470.0 427100.0 540880.0 541860.0 539320.0 481330.0 544990.0 554220.0 538900.0 True False 533620.5425801615 488802.1304658176 454631.5493841621 592285.0725784989 584501.2992383374 535953.9038294037 529987.5337281103 543099.5568916224 453587.61874925584 534125.7652578553 0.9990541128877205 0.9151442642536497 0.8511694790920329 1.1088869159729946 1.0943139935519919 1.0034226743783197 0.9922523274499832 1.0168008963758468 0.8492150131163982 1.0 19.026819953336734 -5.2511157143095675 24.973010745287873 1.0125610583274658 0.9211247920124719 0.22747062279235197 0.07370098783613549 1072.3182415906758 2593940.5864286907 0.020926988667771287 0.03571987091130364 5.608985091758223e-06 5.2511157143095675 -0.09143626631499391 GHTDTEGRPPS(ph)PPPTSTPEK ddPTM_KYSE-520_SHP099_60min_R1 3 GHTDTEGRPPSPPPTSTPEK 20 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 GHTDTEGRPPS(1)PPPTSTPEK;GHT(0.002)DT(0.012)EGRPPS(0.985)PPPTSTPEK;GHTDT(0.001)EGRPPS(0.999)PPPTSTPEK 125.31 2.2217e-06 5054970000.0 1973800.0 1837600.0 1556820.0 1605230.0 1474570.0 1824440.0 1550520.0 1702010.0 2125510.0 1672660.0 True False 1864309.3793272483 1749318.9377061683 1657175.1082000702 1757790.5765700038 1590610.2698443783 1813052.9932183437 1707261.6932169364 1696106.1245621187 1739570.9637467642 1657841.5337097885 1.1245401574391989 1.0551786175797386 0.999598016157656 1.0602886589748763 0.9594465077039268 1.0936226149197958 1.0298099417237783 1.0230809700892851 1.0492986985638417 1.0 20.660874681431032 -4.328645667299281 3.2219761703064638 1.0288765788450867 1.131705392767734 0.4138095478691688 0.03496808199667262 0.26668587223130535 4.490397981313894 0.008389861340430458 0.06188157986557381 4.691960342456517e-05 4.328645667299281 0.10282881392264742 GHTGGHHS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 8 GHTGGHHSPVK 11 0 H7C280;A0A0A0MQU4;Q96I15-2;Q96I15 H7C280 SCLY Selenocysteine lyase 1 GHTGGHHS(1)PVK;GHTGGHHS(1)PVK;GHTGGHHS(1)PVK;GHTGGHHS(1)PVK;GHTGGHHS(1)PVK;GHTGGHHS(1)PVK;GHTGGHHS(1)PVK;GHTGGHHS(1)PVK 191.01 1.2776e-06 14506700000.0 1590549.0 3824770.0 1254921.0 1425667.0 4368320.0 7211010.0 1768959.0 1859554.0 1518963.0 6653750.0 True False 1502318.076289176 3641022.308103188 1335815.215604593 1561161.963037586 4712081.931659126 7166003.411801659 1947782.6390961348 1853103.6411971645 1243157.6091411826 6594802.951539163 0.22780333049049625 0.552104791433292 0.2025557435787868 0.23672609697507735 0.7145144390643805 1.0866137266662659 0.29535115050579963 0.28099454294759 0.18850564880805754 1.0 22.652898122647198 -5.751847886981752 24.977798329430794 0.5680449037853139 0.3151592976805656 0.18601508678258538 0.29332024731061507 432.19129257533655 1125490.4059141432 0.09288573171909406 0.11833445326932283 1.770729053177008e-06 5.751847886981752 -0.2528856061047483 GHTGGHHS(ph)PVKGAK ddPTM_KYSE-520_SHP099_60min_R1 1 GHTGGHHSPVKGAK 14 1 H7C280;A0A0A0MQU4;Q96I15-2;Q96I15 H7C280 SCLY Selenocysteine lyase 1 GHTGGHHS(1)PVKGAK 117.18 8.181800000000001e-05 838510000.0 347800.0 600630.0 307890.0 264680.0 414530.0 469100.0 255720.0 250640.0 328140.0 299310.0 True False 328506.84067788906 571774.8332359892 327737.08204141806 289835.1076210566 447151.1526469349 466172.17289619043 281570.6731866955 249770.58833981564 268558.04773624334 296658.3462596564 1.1073574865490439 1.9273849545953152 1.1047627217424023 0.9769996741213287 1.5072933503632373 1.571410947218601 0.949141248634363 0.8419469449924012 0.9052772359931592 1.0 18.178442846946602 -6.83803995271869 7.52244966492882 0.9060990108091423 1.3676979510677743 0.40837171729894717 0.26034732152806106 0.24647038739085403 20.631098688586682 0.11233353015186723 0.07570891651155118 1.451978037399887e-07 6.83803995271869 0.4615989402586319 GHVDILAPTVQELAALEK ddPTM_KYSE-520_SHP099_60min_R1 1 GHVDILAPTVQELAALEK 18 0 F1T0B3;A0A087X2G1;Q92499-3;Q92499 F1T0B3 DDX1 ATP-dependent RNA helicase DDX1 0 63.336999999999996 0.02325 0.0 79914.0 70368.0 67030.0 82405.0 70661.0 79719.0 68363.0 65547.0 62822.0 52320.0 False True 75481.01111539052 66987.41565547868 71350.861051792 90236.74642403329 76221.61869390636 79221.44415073846 75273.79919858459 65319.63275578481 51415.10841374501 51856.48550434405 1.4555751393732117 1.2917847209268956 1.3759293626988065 1.7401246063324924 1.4698570092553078 1.527705616380463 1.451579266633464 1.2596232104914427 0.9914884881552171 1.0 15.662236812557708 -7.550364173187683 2.24652193832124 0.9828684636961581 1.4763646576400318 0.7537696678057522 0.1089938354364218 0.16618150886159974 1.5453144912073729 0.10109806238318113 0.032663088572971795 2.8160205957313227e-08 7.550364173187683 0.4934961939438737 GHVS(ph)PAEDQTIQAPPVSVSALAR ddPTM_KYSE-520_SHP099_60min_R1 1 GHVSPAEDQTIQAPPVSVSALAR 23 0 H7C357;H0Y6E6;Q92622-3;Q92622-2;Q92622;E9PEM3 H7C357 KIAA0226 Run domain Beclin-1 interacting and cysteine-rich containing protein 1 GHVS(1)PAEDQTIQAPPVSVSALAR 115.12 0.00013689 576740000.0 186230.0 238790.0 143550.0 162120.0 157100.0 239020.0 145220.0 224700.0 285800.0 180230.0 True False 175899.45065969895 227318.16996890254 152803.4626881207 177527.83605684488 169462.8762232731 237528.18752003252 159900.2548106207 223920.56814537448 233905.92443170116 178633.30241681822 0.9846957329896966 1.2725408246581276 0.8554029994450483 0.9938115326480733 0.9486634011157277 1.3296971186581465 0.8951312697422662 1.25352084474643 1.3094194714371414 1.0 17.446641540074022 -6.227836296437013 24.992938337880982 1.1569975029199941 1.015949936735416 0.17458332461403236 0.15912421708068275 1221.206830076261 908296.5200217793 0.05200306997069841 0.052000027138427836 5.91784660267707e-07 6.227836296437013 -0.14104756618457825 GHY(ph)EVTGSDDETGKLQGSGVSLASK ddPTM_KYSE-520_SHP099_60min_R1 1 GHYEVTGSDDETGKLQGSGVSLASK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHY(0.372)EVT(0.372)GS(0.245)DDET(0.011)GKLQGSGVSLASK 68.676 0.014584999999999999 3745100000.0 1754000.0 1813600.0 1529100.0 1951500.0 1582200.0 1499800.0 1713600.0 1610500.0 1939300.0 1524200.0 True False 1656702.1234876874 1726471.9337309022 1627668.2326465056 2136969.973260131 1706710.1385134493 1490439.1918774366 1886827.4111243607 1604913.551393525 1587172.0057746621 1510696.7738096556 1.0966476874838604 1.1428315487674654 1.0774288135546042 1.4145591691912784 1.1297503033712648 0.9865905704682657 1.2489782488686885 1.062366438597916 1.0506224897615637 1.0 20.526782681963386 -5.997539576857364 24.998988181862785 1.081853251942902 1.184935695200662 0.18940199914770062 0.10904723526806107 148.4954479563775 1508745.226367061 0.03438107722247392 0.03874808135983931 1.0056814120021124e-06 5.997539576857364 0.10308244325775995 GHYAYDCHR ddPTM_KYSE-520_SHP099_60min_R1 8 GHYAYDCHR 9 0 Q16629;C9JAB2;Q16629-4;Q16629-3;Q16629-2;F8WEA1;A0A0B4J1Z1 Q16629;A0A0B4J1Z1 SRSF7 Serine/arginine-rich splicing factor 7 0 ;;;;;;; 198.65 4.3455e-06 11963570000.0 1833464.0 1849347.0 1536804.0 1573374.0 1990364.0 1921983.0 1502718.0 1589858.0 1649193.0 1103494.0 False True 1731758.0970001298 1760501.5941935591 1635868.844813338 1722906.9919078588 2146994.3231779663 1909987.1911736068 1654627.4005543746 1584343.1536736449 1349741.123972323 1093717.9016653413 1.5833681558684203 1.6096486959872784 1.4956954095041277 1.5752754794307449 1.963023847290843 1.746325252851196 1.5128465923753909 1.4485848236197438 1.2340852443917667 1.0 20.060809246806055 -7.7551755685952095 1.298535204921195 1.0086044801305651 1.6553937867388693 0.7515406637501298 0.12415413993839707 0.22506988137816966 0.7698919609317295 0.1304810311218166 0.041462868500878956 1.75721309652002e-08 7.7551755685952095 0.6467893066083041 GHYEVT(ph)GSDDETGKLQGSGVSLASK ddPTM_KYSE-520_SHP099_60min_R1 11 GHYEVTGSDDETGKLQGSGVSLASK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVT(0.541)GS(0.458)DDETGKLQGSGVSLASK;GHY(0.014)EVT(0.473)GS(0.473)DDET(0.04)GKLQGSGVSLASK;GHY(0.013)EVT(0.535)GS(0.449)DDET(0.003)GKLQGSGVSLASK;GHYEVT(0.5)GS(0.5)DDETGKLQGSGVSLASK;GHYEVT(0.5)GS(0.5)DDETGKLQGSGVSLASK;GHYEVT(0.5)GS(0.5)DDETGKLQGSGVSLASK;GHY(0.309)EVT(0.344)GS(0.344)DDET(0.003)GKLQGSGVSLASK;GHY(0.015)EVT(0.493)GS(0.493)DDETGKLQGSGVSLASK;GHYEVT(0.553)GS(0.447)DDETGKLQGSGVSLASK;GHY(0.231)EVT(0.256)GS(0.256)DDET(0.256)GKLQGSGVSLASK;GHYEVT(0.5)GS(0.5)DDETGKLQGSGVSLASK 199.2 4.665699999999999e-15 68670079000.0 10279985.0 10534020.0 9592207.0 11185121.0 9702432.0 8866425.0 10615902.0 10823137.0 13392087.0 10479137.0 True False 9709733.73940796 10027949.867313635 10210536.011293847 12248151.536910754 10465958.199113458 8811086.352741648 11689060.975379288 10785594.06388617 10960421.58784032 10386299.998825207 0.9348597422090857 0.9654978065767303 0.9830773242106197 1.1792603273828157 1.0076695454875424 0.8483373630396068 1.1254307093672853 1.0384443030825343 1.0552768155243015 1.0 23.308178466285288 -5.012301589316681 24.167920838848893 1.0363644866882402 0.9562059132822527 0.1579788688281628 0.08170433782877881 735.3959642782842 1444785.472050354 0.02266680687422109 0.04212583655886796 9.72071948490148e-06 5.012301589316681 -0.08015857340598753 GHYEVTGS(ph)DDETGK ddPTM_KYSE-520_SHP099_60min_R1 13 GHYEVTGSDDETGK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHYEVTGS(0.982)DDET(0.018)GK;GHYEVT(0.005)GS(0.995)DDETGK;GHYEVTGS(0.982)DDET(0.018)GK;GHYEVT(0.29)GS(0.706)DDET(0.004)GK;GHYEVT(0.056)GS(0.944)DDETGK;GHYEVT(0.017)GS(0.983)DDETGK;GHYEVT(0.057)GS(0.943)DDETGK;GHYEVT(0.021)GS(0.978)DDET(0.001)GK;GHYEVT(0.307)GS(0.691)DDET(0.002)GK;GHYEVT(0.04)GS(0.96)DDETGK;GHYEVT(0.02)GS(0.98)DDETGK;GHYEVT(0.01)GS(0.99)DDETGK;GHYEVT(0.036)GS(0.964)DDETGK 342.38 4.1888999999999993e-54 34280280000.0 21060810.0 17803110.0 16340090.0 20746220.0 21054070.0 19353200.0 22058250.0 23297710.0 21662500.0 20570260.0 True False 19892524.88561613 16947821.872587085 17393398.34646838 22717934.511221513 22710905.527728386 19232409.50009496 24288113.177774254 23216895.68173641 17729136.067185894 20388023.49982011 0.9756965841142792 0.8312636030038234 0.8531184176152166 1.1142784150421428 1.1139336546246756 0.9433189784318551 1.1912931716008939 1.138751663786402 0.8695858167586634 1.0 24.281218585460067 -5.256845880742 24.86404547907765 1.0625326083898152 0.8811499316904561 0.37585727198249663 0.09760762981340348 352.8702603140695 1910036.0595043192 0.026504871372792574 0.04400778371191125 5.535465129134614e-06 5.256845880742 -0.18138267669935915 GHYEVTGS(ph)DDETGKLQGSGVSLASK ddPTM_KYSE-520_SHP099_60min_R1 6 GHYEVTGSDDETGKLQGSGVSLASK 25 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GHY(0.067)EVT(0.438)GS(0.494)DDETGKLQGSGVSLASK;GHYEVT(0.131)GS(0.869)DDETGKLQGSGVSLASK;GHYEVT(0.027)GS(0.973)DDETGKLQGSGVSLASK;GHYEVT(0.029)GS(0.971)DDET(0.001)GKLQGSGVSLASK;GHYEVT(0.15)GS(0.849)DDET(0.001)GKLQGSGVSLASK;GHYEVT(0.121)GS(0.875)DDET(0.004)GKLQGSGVSLASK 265.45 5.630599999999999e-38 60658200000.0 7721070.0 8403950.0 7482740.0 9195140.0 8243850.0 7095230.0 7632960.0 8320900.0 10290660.0 8097290.0 True False 7292766.855528553 8000211.627413868 7965089.3932073135 10069043.340980357 8892594.09390981 7050946.0377280675 8404574.087310817 8292036.740012664 8422135.550428022 8025554.310196291 0.9086932283622146 0.9968422514130613 0.9924659513035557 1.254622790127762 1.1080348783649703 0.8785618743829314 1.0472266166877706 1.0332042397965975 1.0494148098565457 1.0 22.936169609279208 -4.484955412033249 2.1306229583424683 1.0506767852083696 0.9052352814006117 0.18278452351516605 0.08957820252677522 0.7963693688405884 5.657025278180288 0.025953919957408117 0.18527549945755406 3.2737430388354264e-05 4.484955412033249 -0.1454415038077579 GHYT(ph)EGAELVDSVLDVVR ddPTM_KYSE-520_SHP099_60min_R1 1 GHYTEGAELVDSVLDVVR 18 0 A0A0B4J269;Q13509;Q13509-2;G3V2A3;Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371 A0A0B4J269;Q5JP53;P68371 TUBB3;TUBB;TUBB2B;TUBB2A;TUBB4B Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain 1 GHY(0.467)T(0.533)EGAELVDSVLDVVR 63.336999999999996 0.029796 12202000.0 13101.0 14024.0 11479.0 24633.0 12400.0 11407.0 11432.0 13708.0 18679.0 12453.0 True False 12374.261413803983 13350.26598954685 12218.954707049386 26974.1129138185 13375.809453651096 11335.804681788188 12587.658125568216 13660.45014747125 15287.364459271332 12342.67610828739 1.0025590321936249 1.0816346368015701 0.989976128341006 2.1854347207334515 1.0837041607751512 0.9184235721924885 1.019848371222861 1.1067656663451657 1.2385777869522763 1.0 13.591367609497027 -5.963748336720914 24.999998017634354 1.0544190868836534 1.3199722589158311 0.12598659428240755 0.32783908263367173 387.6125106992045 267305.0901774358 0.10644287042365916 0.12069459904808914 1.0870553637586056e-06 5.963748336720914 0.26555317203217776 GHYTEGAELVDAVLDVVR ddPTM_KYSE-520_SHP099_60min_R1 2 GHYTEGAELVDAVLDVVR 18 0 P04350;Q9BUF5;K7ESM5;M0R278;M0R1I1;K7ES63;K7EL29 P04350 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain 0 ; 155.1 2.4026e-06 76462000.0 54538.0 64703.0 46351.0 123126.0 55852.0 43552.0 54111.0 43355.0 45638.0 29103.0 False True 51512.668421192386 61594.57075881701 49338.85962422217 134827.8580208181 60247.23464559038 43280.17581320586 59581.067952468686 43204.61162413306 37351.289640356816 28845.17006179137 1.7858334102674136 2.135351278112444 1.7104721351453207 4.674191822478195 2.0886420331906637 1.500430599663382 2.0655474668665734 1.4978109517670122 1.2948888691016158 1.0 14.816042148636743 -6.000461944571475 24.999994278922244 1.568247891666437 2.5953875115972425 0.28785654812581496 0.8140031942337335 24.779925825505895 1341195.214461899 0.2631265348761698 0.29506033488540967 9.989368988088234e-07 6.000461944571475 1.0271396199308054 GHYTEGAELVDSVLDVVR ddPTM_KYSE-520_SHP099_60min_R1 5 GHYTEGAELVDSVLDVVR 18 0 A0A0B4J269;Q13509;Q13509-2;G3V2A3;Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371 A0A0B4J269;Q5JP53;P68371 TUBB3;TUBB;TUBB2B;TUBB2A;TUBB4B Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain 0 ;;;; 234.77 3.0314e-23 5793390000.0 4294540.0 4831620.0 3482365.0 8871440.0 3310409.0 3013639.0 3618248.0 3059181.0 2888899.0 2640153.0 False True 4056313.3052467597 4599501.722790528 3706843.819881002 9714578.99030431 3570919.354649331 2994829.7611483764 3984015.818537524 3048569.41512921 2364347.7648174153 2616763.2984279506 1.5501261836267861 1.7577064480970555 1.416575898212853 3.71244086010395 1.364632160958005 1.144478662990861 1.5224975911772247 1.1650153519657935 0.9035390271018487 1.0 21.319351999392772 -5.975175294774675 24.999989056752526 1.1890665984997688 2.097618925369179 0.3595730061753907 0.609735452996784 270.58303267826983 272492.2804978866 0.19232978408906637 0.21807361346591422 1.058826263668084e-06 5.975175294774675 0.90855232686941 GIAPAS(ph)PMLGNASNPNK ddPTM_KYSE-520_SHP099_60min_R1 3 GIAPASPMLGNASNPNK 17 0 P27448-8;P27448-3;P27448-2;J3KNR0;P27448-6;P27448-4;P27448;H0YIY6;P27448-7;H0YKP9 P27448-8 MARK3 MAP/microtubule affinity-regulating kinase 3 1 GIAPAS(1)PMLGNASNPNK;GIAPAS(0.999)PMLGNAS(0.001)NPNK;GIAPAS(1)PMLGNASNPNK 235.53 3.6012e-23 1861390000.0 1752990.0 2071290.0 1418070.0 1495630.0 1517160.0 2042300.0 1495670.0 1778990.0 1974530.0 2140600.0 True False 1655748.1502010722 1971782.119330323 1509481.0611922212 1637774.225522442 1636551.8605404252 2029553.2481472786 1646866.9199325237 1772819.098909387 1616005.1258506875 2121635.9493616 0.7804110552987598 0.9293687354438126 0.7114703451581427 0.7719393263558002 0.7713631836945747 0.956598255585729 0.7762250259890562 0.8355906202677363 0.76167880089746 1.0 21.016745695365397 GIAPAS(ph)PMLGNASNPNKADIPER ddPTM_KYSE-520_SHP099_60min_R1 4 GIAPASPMLGNASNPNKADIPER 23 1 P27448-8;P27448-3;P27448-2;J3KNR0;P27448-6;P27448-4;P27448;H0YIY6;P27448-7;H0YKP9 P27448-8 MARK3 MAP/microtubule affinity-regulating kinase 3 1 GIAPAS(0.998)PMLGNAS(0.002)NPNKADIPER;GIAPAS(0.996)PMLGNAS(0.004)NPNKADIPER;GIAPAS(1)PMLGNASNPNKADIPER;GIAPAS(1)PMLGNASNPNKADIPER 119.32 0.00010556 4944160000.0 2351570.0 3100460.0 1947550.0 1584630.0 1684540.0 2399510.0 1557590.0 1939020.0 2739130.0 2392210.0 True False 2221123.7243614257 2951509.247714661 2073092.189190176 1735232.7587636174 1817103.7142784991 2384533.7680369564 1715046.3978134864 1932293.9921906688 2241773.039848163 2371016.8805112154 0.936781067489713 1.2448284413218877 0.8743472921808959 0.7318517101360676 0.7663816015880549 1.0057008820294973 0.7233379112187952 0.8149642493367852 0.9454901220968168 1.0 21.1770745034824 -4.887732954080789 7.748363414489361 0.8417013585691149 1.0891430639392363 0.37529133803448 0.11948601718556799 0.20142849165125998 12.86122267645597 0.029898714070106646 0.0627956531816746 1.2949918819508795e-05 4.887732954080789 0.24744170537012145 GIASTSDPPTANIKPTPVVS(ph)TPSK ddPTM_KYSE-520_SHP099_60min_R1 1 GIASTSDPPTANIKPTPVVSTPSK 24 1 P12270 P12270 TPR Nucleoprotein TPR 1 GIASTSDPPTANIKPT(0.01)PVVS(0.551)T(0.419)PS(0.019)K 104.6 0.0026503 1062700000.0 1445600.0 1664400.0 1169900.0 1041300.0 1205400.0 1788400.0 1402000.0 1583400.0 1629600.0 1973000.0 True False 1365409.6862678432 1584439.7256846654 1245313.625906184 1140264.838921739 1300258.122212181 1777237.9322267012 1543727.8422014208 1577907.5549683394 1333705.7188729895 1955520.754970775 0.6982332878835894 0.8102392785436555 0.636819436838345 0.5831003511587788 0.6649165542769262 0.9088310250398042 0.7894203312735956 0.8068989045283342 0.6820207433149548 1.0 20.89912141755791 -6.241800830941627 24.71960260647303 0.8223645167969418 0.6783380861318721 0.41064044472860617 0.09424415824386645 817.1697192576501 1028595.3786685958 0.03159442480298377 0.03154958322741585 5.730587776114143e-07 6.241800830941627 -0.1440264306650697 GIASTSDPPTANIKPTPVVST(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 GIASTSDPPTANIKPTPVVSTPSK 24 1 P12270 P12270 TPR Nucleoprotein TPR 1 GIASTSDPPTANIKPT(0.018)PVVS(0.168)T(0.813)PS(0.001)K 109.41 0.00097438 166360000.0 275820.0 359960.0 243590.0 228800.0 197740.0 360910.0 275220.0 312460.0 350760.0 440300.0 True False 260519.7147664619 342666.9812890246 259292.20115778016 250545.08320877166 213301.01301330372 358657.4268172333 303041.92348835577 311376.1491887126 287070.82594004046 436399.2845482163 0.5969755771624734 0.7852143516774359 0.5941627549325916 0.5741189137561241 0.4887748916319243 0.8218561292751305 0.6944143453444953 0.7135120524110522 0.6578169032454565 1.0 18.73528921088388 -6.27714328578572 24.92112889664402 0.7544202913747979 0.6150686300756473 0.3525304159566459 0.11260745294105448 1104.2618411806445 1752390.1808642338 0.039495330336172245 0.03494997881110553 5.282709317992396e-07 6.27714328578572 -0.13935166129915066 GIAYIEFK ddPTM_KYSE-520_SHP099_60min_R1 3 GIAYIEFK 8 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ;; 138.9 0.0036138000000000003 2147320000.0 2241810.0 2619000.0 2033650.0 1844410.0 2715350.0 2672110.0 2174840.0 2110020.0 2033650.0 1927120.0 False True 2117452.3303625593 2493179.3088008524 2164742.3329550447 2019702.1718579137 2929032.5967718973 2655432.370321124 2394694.0515929637 2102700.833102371 1664390.4241446059 1910047.2160766728 1.1085863807659722 1.3052972135013292 1.1333449323841993 1.0574095524227287 1.5334870112730872 1.3902443604381192 1.2537355262409577 1.1008632746898361 0.8713870579405584 1.0 20.865176871227984 -7.492931545697456 3.154136942429945 0.9389087002281392 1.259518615305271 0.46965748220542103 0.13551902890883902 0.23764813208217167 4.684059620535907 0.10558773989518547 0.038981337604908385 3.2141671217041e-08 7.492931545697456 0.3206099150771319 GICDYFPS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 GICDYFPSPSK 11 0 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 GICDY(0.001)FPS(0.968)PS(0.032)K 62.042 0.03547 428970000.0 552580.0 491530.0 420650.0 438490.0 422950.0 466060.0 444840.0 489450.0 599440.0 417260.0 True False 521927.28585908015 467916.16099842795 447765.7720637966 480163.957763174 456233.7587436879 463151.1466638206 489808.76842002803 487752.2121884891 490596.8066526898 413563.40102336736 1.2620248420618583 1.1314254594109732 1.0827016388679342 1.1610407414558512 1.1031773063446433 1.1199036121613948 1.1843619798270124 1.1793892084781696 1.1862674633168757 1.0 18.657748992056817 -4.260820946568058 23.812675240774947 1.1336055191371732 1.2620249066997808 0.34881492618166443 0.05455121212327896 30.77989943466192 1184618.4526807875 0.01312681190632607 0.07598531616096907 5.485030583121426e-05 4.260820946568058 0.12841938756260762 GIEFEDES(ph)SDRDARPALETQPQQEK ddPTM_KYSE-520_SHP099_60min_R1 2 GIEFEDESSDRDARPALETQPQQEK 25 2 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 GIEFEDES(0.841)S(0.159)DRDARPALETQPQQEK;GIEFEDES(0.5)S(0.5)DRDARPALETQPQQEK 146.94 7.796699999999999e-07 1549730000.0 566330.0 480930.0 510430.0 494310.0 474410.0 481870.0 471390.0 499920.0 656910.0 468230.0 True False 534914.5459491343 457825.4009093523 543333.1345168753 541289.0737802788 511743.3679763398 478862.47058939934 519042.7015230588 498185.8942022048 537631.7033534943 464081.84647742775 1.1526297570339281 0.9865186591210916 1.1707700670495893 1.1663655406667717 1.1027006806249429 1.0318491753645669 1.1184292285139068 1.0734871402181336 1.1584846669490312 1.0 18.824019739044203 -6.007964834313453 24.72920077864163 1.0818453806069273 1.1159504357602463 0.08859311062954678 0.06334424786642577 1071.4268313152093 3326573.4097989057 0.02003098794718635 0.021724255575808225 9.818274403188e-07 6.007964834313453 0.034105055153319075 GIEFEDESS(ph)DRDARPALETQPQQEK ddPTM_KYSE-520_SHP099_60min_R1 2 GIEFEDESSDRDARPALETQPQQEK 25 2 D6RB01;Q9Y6X4 D6RB01 FAM169A Soluble lamin-associated protein of 75 kDa 1 GIEFEDES(0.15)S(0.85)DRDARPALETQPQQEK;GIEFEDES(0.134)S(0.866)DRDARPALETQPQQEK 194.7 1.6297999999999998e-15 1716420000.0 786620.0 747790.0 750820.0 593010.0 749740.0 682390.0 659040.0 670630.0 960470.0 705100.0 True False 742984.6205119072 711865.045944326 799219.058554475 649369.4921050415 808740.2725629326 678130.9508902823 725662.194810574 668303.741056218 786072.8594783625 698853.3625594984 1.0631480941735492 1.018618617412347 1.1436148144546299 0.9291927704644277 1.1572388656770307 0.9703479831687125 1.0383611694345867 0.9562860778241166 1.1248037164755553 1.0 19.414630247203025 GIEGHS(ph)PGNLPK ddPTM_KYSE-520_SHP099_60min_R1 4 GIEGHSPGNLPK 12 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 GIEGHS(1)PGNLPK;GIEGHS(1)PGNLPK;GIEGHS(1)PGNLPK;GIEGHS(1)PGNLPK 176.58 1.1776e-06 2126840000.0 2723760.0 2722960.0 2499190.0 2310400.0 2322390.0 2456110.0 2441210.0 2600180.0 2806930.0 2817610.0 True False 2572667.603119052 2592144.9143537106 2660291.7862453847 2529979.721352908 2505148.8804084472 2440780.5064422544 2687991.3307136428 2591160.582466577 2297262.2689470802 2792648.1674674116 0.9212286864808126 0.928203181679154 0.9526054220635828 0.9059428791730998 0.897051375676983 0.8740021513901417 0.962524159694388 0.9278507091054156 0.8226107018093921 1.0 21.413202396066673 -5.289969634186348 23.619840564186457 0.9096405938226475 0.933431515713146 0.03990548570424324 0.04566557587432821 1155.2732259078828 956433.9440485581 0.012520959941485573 0.018578552361773415 5.1289724444625e-06 5.289969634186348 0.023790921890498473 GIEYSRVS(ph)PQPMISR ddPTM_KYSE-520_SHP099_60min_R1 1 GIEYSRVSPQPMISR 15 1 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 GIEYS(0.01)RVS(0.989)PQPMISR 80.316 0.007622399999999999 0.0 352860.0 369670.0 252490.0 310080.0 370290.0 236030.0 232140.0 292040.0 324610.0 299200.0 True False 333286.15239102935 351910.4983140176 268765.90939828363 339549.90997104865 399429.7163381019 234556.84921911688 255606.97666807278 291026.9814026482 265669.00675218506 296549.3207740779 1.123881017569212 1.1866845535016952 0.9063109930473903 1.1450031619857601 1.3469250757191988 0.790953924989128 0.8619374881752081 0.9813780070140953 0.8958678646058387 1.0 18.177912541834626 -6.278518873196349 24.999142729553466 0.9021079618625831 1.1313563004227303 0.5149189460387611 0.11414599723173151 741.1800082387198 1084857.2888301748 0.04157561060965671 0.036756621734345525 5.26600329852083e-07 6.278518873196349 0.22924833856014715 GIFPVLCK ddPTM_KYSE-520_SHP099_60min_R1 2 GIFPVLCK 8 0 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 132.72 0.0058229 1304610000.0 1619030.0 1832680.0 1472180.0 1186000.0 2021830.0 2161990.0 1489360.0 1668870.0 1470290.0 1754840.0 False True 1529219.1784437106 1744635.3018912391 1567079.078371282 1298717.0834160992 2180936.51836092 2148496.218460529 1639919.0435528592 1663081.0794871883 1203322.3989947033 1739293.4828448605 0.8792185985440802 1.0030712580131338 0.9009860002511494 0.7466923185912614 1.2539209396643571 1.235269515841777 0.9428650539588866 0.9561819761245721 0.6918455170811653 1.0 20.730069958277326 -7.5415027149744756 24.483565600778334 0.8386195860237465 0.9973235208096501 0.11672831827922248 0.16096311639477373 418.93586347264164 550730.5945109375 0.11436604349498757 0.043243331538311953 2.874069626428258e-08 7.5415027149744756 0.1587039347859036 GIFPVLCKDPVQEAWAEDVDLR ddPTM_KYSE-520_SHP099_60min_R1 4 GIFPVLCKDPVQEAWAEDVDLR 22 1 P14618;B4DNK4;P14618-3;P14618-2;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;; 215.58 2.1302e-19 3564157000.0 1387201.0 1086508.0 810668.0 611883.0 1127852.0 965401.0 666277.0 630115.0 818722.0 707448.0 False True 1310250.1952133651 1034310.5247982434 862924.9563946615 670036.1763506685 1216607.5357999431 959375.5742616812 733630.7813968867 627929.2781349471 670062.7231020684 701180.5611062159 1.8686345114106584 1.4750986866584916 1.2306743858290508 0.9555829318679164 1.7350845178602285 1.3682289947515438 1.0462794066045924 0.8955314978274581 0.9556207919468638 1.0 19.41942647512012 -1.0000000000000002 0.24966890887156157 0.9510458897402442 5.97518240276918 0.5109022534774206 0.2304619787649112 48.000283402724115 0.6521604323819552 0.32994758791876244 101.25989948724147 0.09999999999999995 1.0000000000000002 5.024136513028936 GIGEFFRLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 GIGEFFRLSPK 11 1 H0YKX3;H0YMA4;A0A0U1RQM0;Q15004 H0YKX3 KIAA0101 PCNA-associated factor 1 GIGEFFRLS(1)PK 135.02 7.5981e-05 929370000.0 1826300.0 1712800.0 1712500.0 1506200.0 1648800.0 1341100.0 1292100.0 1181500.0 1879700.0 1439900.0 True False 1724991.4983612115 1630514.5170347865 1822890.490096878 1649348.7951444592 1778551.179611284 1332729.6974442147 1422718.0776807817 1177401.6522641722 1538393.8633809271 1427143.6062252503 1.2087021171777936 1.1425020649095334 1.277299973279049 1.1556992498512009 1.2462314036605577 0.9338441426852919 0.9968990306755646 0.8250057297165506 1.0779530922258975 1.0 20.444699082529528 -6.264082564165693 24.993450286314115 0.957688163062583 1.2037114326428413 0.7434722005951876 0.07018867153276 110.43013853048066 1044200.5572103668 0.02263296411443703 0.02087207528515984 5.443991467283919e-07 6.264082564165693 0.24602326958025833 GIGIENIHYLNDGLWHMK ddPTM_KYSE-520_SHP099_60min_R1 1 GIGIENIHYLNDGLWHMK 18 0 A0A3B3IRV3;Q9ULC4-2;Q9ULC4;Q9ULC4-3 A0A3B3IRV3 MCTS1 Malignant T-cell-amplified sequence 1 0 91.932 0.0027665 14466000.0 28447.0 26997.0 21363.0 17856.0 30624.0 27868.0 20187.0 21767.0 25264.0 18108.0 False True 26868.988202311408 25700.023596676852 22740.093162008532 19553.028871397837 33033.93457327508 27694.065474890274 22227.69896613416 21691.495357455988 20676.694453612658 17947.577207810813 1.4970816334261532 1.4319494658862457 1.2670285743143097 1.0894522778756082 1.8405790481234794 1.5430531460724277 1.2384790832079904 1.208602983360663 1.152060482270227 1.0 14.131501483420102 -6.945280317372731 4.369982988501971 1.148074984213365 1.4374128776994315 0.3786673513079336 0.18815767374884537 0.26896442235940876 10.69375068417201 0.0901104830549092 0.058025281105123366 1.1342784540945262e-07 6.945280317372731 0.2893378934860664 GIGLDES(ph)ELDS(ph)EAELMR ddPTM_KYSE-520_SHP099_60min_R1 4 GIGLDESELDSEAELMR 17 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 2 GIGLDES(1)ELDS(1)EAELMR;GIGLDES(1)ELDS(1)EAELMR;GIGLDES(1)ELDS(1)EAELMR;GIGLDES(1)ELDS(1)EAELMR 291.18 1.3909e-37 1251070000.0 2203690.0 2039640.0 1864020.0 1661130.0 1739470.0 1922510.0 1740670.0 1810810.0 2182160.0 1795040.0 True False 2081446.922752895 1941652.6328379419 1984177.7117374514 1819003.295763052 1876356.392769555 1910510.9019711236 1916633.910902102 1804528.7227562314 1785934.7517770503 1779137.342119988 1.1699191925636725 1.0913449944928386 1.1152470721417949 1.0224074627063702 1.0546439267773013 1.0738411570264683 1.0772827175996855 1.014271737226305 1.003820621093233 1.0 20.762746454379673 -1.0000000000000002 0.2638567442735793 1.0105930852028027 2.0108436119967625 0.7276028362827005 0.027041356712466356 29.545820286221584 0.40970494243612743 0.0344136170744008 13.35719000582031 0.09999999999999995 1.0000000000000002 1.0002505267939599 GIGT(ph)PPNT(ph)TPIKNGS(ph)PEIK ddPTM_KYSE-520_SHP099_60min_R1 3 GIGTPPNTTPIKNGSPEIK 19 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 3 GIGT(0.999)PPNT(0.501)T(0.501)PIKNGS(1)PEIK;GIGT(1)PPNT(0.5)T(0.5)PIKNGS(1)PEIK;GIGT(1)PPNT(0.503)T(0.503)PIKNGS(0.995)PEIK 123.2 2.3474000000000003e-05 3976660000.0 5110700.0 4318800.0 4150970.0 3917490.0 4057770.0 3989550.0 3592330.0 3796570.0 4617400.0 4002150.0 True False 4827199.283072132 4111318.365349039 4418548.167986832 4289807.071763683 4377093.413446918 3964649.738601572 3955477.774162214 3783400.5847960995 3778996.555181724 3966694.0646255864 1.2169325903200876 1.0364596559167978 1.11391201237091 1.08145649799907 1.1034613060990044 0.9994846272511295 0.9971723832792153 0.9537918788685843 0.9526816269704986 1.0 21.919505701753756 -6.357207015636361 1.5471752624982578 0.9672449310046326 1.1105100486703572 0.6782414365376996 0.0447910508857082 0.22894624418879278 1.0944095597138765 0.019763599853182927 0.01664644388945646 4.393321485718221e-07 6.357207015636361 0.14326511766572458 GIGT(ph)PPNTTPIK ddPTM_KYSE-520_SHP099_60min_R1 1 GIGTPPNTTPIK 12 0 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GIGT(0.999)PPNT(0.001)TPIK 124.07 0.00049258 331030000.0 840940.0 989370.0 660870.0 607740.0 666020.0 905510.0 681490.0 844160.0 819000.0 905820.0 True False 794291.3818276712 941839.1801253542 703470.7376293861 665499.4268763068 718431.9848645735 899858.3762081212 750381.6599014585 841231.8059884243 670290.245309879 897795.1395172952 0.8847133904675922 1.0490580074110667 0.7835537381140327 0.7412597791898455 0.80021817143145 1.0022981152381103 0.8358049925564374 0.9369975052891437 0.7465959836564324 1.0 19.776026760249998 -10.210691648770974 16.678885726734958 0.9999999999267839 0.867373215797573 0.14201048925534632 0.09969258326260606 0.0 0.0 0.09887742961710172 0.023981299194169792 6.156138064247281e-11 10.210691648770974 -0.13262678412921092 GIGTPPNT(ph)TPIKNGS(ph)PEIK ddPTM_KYSE-520_SHP099_60min_R1 2 GIGTPPNTTPIKNGSPEIK 19 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 2 GIGT(0.005)PPNT(0.532)T(0.463)PIKNGS(1)PEIK;GIGT(0.009)PPNT(0.55)T(0.441)PIKNGS(1)PEIK 137.52 2.9232e-06 3330100000.0 4232000.0 4332300.0 3755100.0 4091100.0 4263000.0 4213600.0 4078000.0 4087500.0 5198600.0 4212900.0 True False 3997242.5237171557 4124169.805085124 3997159.754372429 4479916.913965938 4598473.846847951 4187301.3594444394 4490244.037444645 4073321.4165296745 4254665.286041428 4175576.9835866075 0.9572910616735243 0.9876886047835891 0.9572712394202041 1.0728857189259429 1.101278665181763 1.0028078456950784 1.0753589396375478 0.9755110329760701 1.0189406883804806 1.0 21.993544133101256 -5.24883395090938 24.785284018898462 1.037304381897339 0.9694441268320001 0.404381689612774 0.03764691225002528 725.434117606174 1426373.8266150495 0.010559038995497172 0.018141220549136507 5.6385319946825765e-06 5.24883395090938 -0.06786025506533899 GIGTPPNTT(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 1 GIGTPPNTTPIK 12 0 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GIGT(0.001)PPNT(0.021)T(0.978)PIK 94.191 0.010513 279740000.0 417470.0 503200.0 373930.0 362880.0 424520.0 533940.0 381010.0 500450.0 550340.0 594580.0 True False 394312.10689418775 479025.5166814018 398034.1261091538 397368.0060961498 457927.3088116103 530607.4824050128 419526.2090992603 498714.05575590825 450412.1289424151 589312.4837762406 0.6691053010916809 0.8128548603142874 0.6754211680000413 0.674290833871133 0.7770534672492757 0.9003839168736874 0.7118909248468467 0.8462641968149242 0.7643010140498477 1.0 19.168673302464633 -13.999999999828558 0.12655818336747113 1.8045282023369167 0.6549697405904331 0.5697337841150916 0.06803082817975539 111.00700834938989 0.89353987197347 22.610050131317266 0.5666302664514274 1.0000000003947588e-14 13.999999999828558 -1.1495584617464836 GIGTPPNTT(ph)PIKNGS(ph)PEIK ddPTM_KYSE-520_SHP099_60min_R1 1 GIGTPPNTTPIKNGSPEIK 19 1 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 2 GIGTPPNT(0.454)T(0.546)PIKNGS(1)PEIK 109.05 6.4053e-05 1356400000.0 1027500.0 969590.0 896560.0 900500.0 1063400.0 1130100.0 833710.0 870250.0 1210600.0 1006500.0 True False 970502.5267295323 923009.4410157402 954353.6921467204 986083.249254802 1147083.5300816603 1123046.626710691 917989.5430254964 867231.3058678773 990785.5567425374 997583.1930451517 0.9728537263815012 0.925245580970773 0.9566657686298102 0.9884721957321216 1.1498625258312085 1.1257673891663698 0.9202135214641164 0.8693323142510336 0.9931858953218085 1.0 19.92807763375569 GIIRPGTAFELLEAQAATGYVIDPIK ddPTM_KYSE-520_SHP099_60min_R1 3 GIIRPGTAFELLEAQAATGYVIDPIK 26 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;; 128.07 5.8285e-07 294466900.0 449152.0 299976.0 240473.0 439236.0 405466.0 261303.0 230200.0 251092.0 234410.0 116084.0 False True 424236.6431976858 285564.70268684416 255974.27435040404 480980.8573788811 437373.86741403956 259672.11105157385 253470.86253549723 250221.02045731322 191847.05299522413 115055.58607198531 3.6872320387143938 2.481971648974772 2.2247878880930823 4.18042160141579 3.801413580566124 2.2569274549530194 2.20302960672341 2.174783763221724 1.667429279576167 1.0 16.81197150408931 -7.314234518429898 0.8198068690820757 1.138319871562214 3.1806999866513994 0.5868115889627694 0.6149836630551427 0.4954483843592849 0.6200451703558923 0.6159040927041974 0.267166394633284 4.8502651577365164e-08 7.314234518429898 2.0423801150891854 GIITDS(ph)FGR ddPTM_KYSE-520_SHP099_60min_R1 8 GIITDSFGR 9 0 C9JUH3;A0A0A0MT72;Q9BSQ5-3;Q9BSQ5-4;Q9BSQ5;Q9BSQ5-2 C9JUH3 CCM2 Cerebral cavernous malformations 2 protein 1 GIIT(0.002)DS(0.998)FGR;GIITDS(1)FGR;GIITDS(1)FGR;GIITDS(1)FGR;GIITDS(1)FGR;GIITDS(1)FGR;GIIT(0.001)DS(0.999)FGR;GIITDS(1)FGR 206.85 2.558e-07 5114900000.0 5605140.0 5221630.0 5071940.0 4529340.0 4731720.0 4558720.0 4125480.0 4754130.0 5458000.0 4915100.0 True False 5294211.710630426 4970775.056973586 5398885.367790928 4959807.111804267 5104079.444195965 4530267.33750868 4542523.779204786 4737639.032652279 4466964.784983292 4871556.037889936 1.0867598913885346 1.020367007648469 1.1082465901653467 1.0181155822139647 1.0477308286094855 0.9299425691243651 0.9324584883913873 0.9725104249656417 0.9169482502592974 1.0 22.215951230663812 -6.236930937298464 8.725141309224126 0.9475287946685875 1.0551443944682366 0.7122350888693999 0.03362035270281387 0.16199955217183612 53.887805356668004 0.010571179313868148 0.010407656628128117 5.795208460966527e-07 6.236930937298464 0.10761559979964908 GIIWGEDTLMEYLENPKK ddPTM_KYSE-520_SHP099_60min_R1 2 GIIWGEDTLMEYLENPKK 18 1 P99999;C9JFR7 P99999 CYCS Cytochrome c 0 ; 263.6 1.8696e-29 267910000.0 301360.0 181165.0 131009.0 211230.0 281050.0 227650.0 142236.0 184554.0 165310.0 102414.0 False True 284642.96005373396 172461.56146579108 139454.04976181133 231305.23569138473 303167.03604424547 226229.1519075202 156614.60296958717 183913.82524922755 135293.8711259779 101506.6916368863 2.804179266052428 1.6990166725433955 1.3738409509066831 2.2787190870018583 2.986670446602145 2.228711706187765 1.5428992950517493 1.8118394194850844 1.3328566712621903 1.0 16.6312153119274 -7.569596444290521 1.0691470091729676 1.0426737326924007 2.1749412691749725 0.42984619168879024 0.46752585252266865 0.545362772172851 1.1714504841308992 0.47259814461379274 0.16672700702252072 2.6940369979261815e-08 7.569596444290521 1.1322675364825718 GIKS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 1 GIKSPIR 7 1 Q8IX21;Q8IX21-2 Q8IX21 FAM178A Protein FAM178A 1 GIKS(1)PIR 60.518 0.026720999999999998 1618300000.0 1913100.0 2004700.0 1797300.0 1811600.0 1906500.0 1888500.0 1755200.0 1742500.0 1918200.0 1701800.0 True False 1806976.529329698 1908391.2028839528 1913156.833781676 1983773.9193225973 2056530.703498855 1876713.170996496 1932632.7451012377 1736455.6742025563 1569903.2338869465 1686723.3759803672 1.0712939389242986 1.1314191941964085 1.1342445720654697 1.1761110017044596 1.2192459847208474 1.1126383838166123 1.1457911668402305 1.0294845609721175 0.9307413748116689 1.0 20.685791959176928 -7.403270733980342 3.007301056244815 0.966394012222764 1.1447122511414074 0.7662954880486261 0.04004990553233798 0.12801238102103918 2.1660864424814674 0.02851935087841572 0.011398906303842934 3.9512023005705284e-08 7.403270733980342 0.1783182389186434 GILAADES(ph)TGSIAK ddPTM_KYSE-520_SHP099_60min_R1 7 GILAADESTGSIAK 14 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 GILAADES(0.94)T(0.045)GS(0.015)IAK;GILAADES(0.496)T(0.496)GS(0.008)IAK;GILAADES(0.5)T(0.5)GSIAK;GILAADES(0.5)T(0.5)GSIAK;GILAADES(0.991)T(0.009)GSIAK;GILAADES(0.981)T(0.016)GS(0.003)IAK;GILAADES(0.5)T(0.5)GSIAK 341.55 4.4626000000000003e-54 5938070000.0 7559200.0 7278310.0 5811170.0 4860880.0 4886530.0 6909490.0 5172210.0 7239210.0 7294790.0 7463420.0 True False 7139876.1071083965 6928649.062633961 6185767.316400752 5322856.573723134 5271072.110447551 6866365.309964816 5695067.462705142 7214098.870154307 5970240.02269114 7397299.905252888 0.9652003026182983 0.9366456884780171 0.8362196200816712 0.719567496505492 0.712567041753237 0.9282258929489866 0.769884624883334 0.9752340668291023 0.8070836790666849 1.0 22.81856733680236 -10.105249592809482 9.367688125482262 0.9999999999998614 0.8479479315562031 0.18841011943369557 0.09325908192699643 1.3215260258008147e-09 7.503029760697705e-11 0.09433634507190718 0.02287992424518949 7.847844825260339e-11 10.105249592809482 -0.15205206844365837 GILAADES(ph)TGSIAKR ddPTM_KYSE-520_SHP099_60min_R1 1 GILAADESTGSIAKR 15 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 GILAADES(0.977)T(0.02)GS(0.003)IAKR 122.31 0.00024934 0.0 212600.0 230410.0 196560.0 136160.0 162610.0 173020.0 147870.0 150970.0 279680.0 175330.0 True False 200806.65419240735 219340.75774753914 209230.57210711986 149100.60546200344 175406.48187566173 171940.11800148993 162818.14267212828 150446.32030666294 228897.1621590556 173776.71260467585 1.1555440955384042 1.2621987978706721 1.2040196236367866 0.8580010706106058 1.009378525157703 0.9894312961981047 0.9369387890454736 0.8657450014543251 1.3171912319447145 1.0 17.4068752374824 -5.197183438756347 10.08032053752694 0.9888675791092798 1.2132416542561806 0.3830735054257097 0.1221178593260112 0.5928848571095858 90.71694765563007 0.03197434951719265 0.05543697944907907 6.350626353130154e-06 5.197183438756347 0.22437407514690078 GILAADESTGS(ph)IAK ddPTM_KYSE-520_SHP099_60min_R1 4 GILAADESTGSIAK 14 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 GILAADESTGS(1)IAK;GILAADES(0.001)T(0.017)GS(0.982)IAK;GILAADESTGS(1)IAK;GILAADEST(0.002)GS(0.998)IAK 274.38 4.0970000000000003e-25 1483090000.0 2264520.0 2041710.0 1745100.0 1632190.0 1626660.0 1902770.0 1608600.0 2317650.0 2183220.0 2440280.0 True False 2138902.5613912963 1943623.1869308087 1857591.9382587238 1787312.8468641846 1754668.887570653 1890894.1066333062 1771212.9864231115 2309610.6130935787 1786802.2824974735 2418661.017709109 0.8843333339110114 0.8035947049627304 0.7680249214989975 0.7389678974348706 0.7254711903500345 0.7817937663808343 0.7323113795006946 0.9549129027105998 0.7387568036259521 1.0 21.205777154954884 -8.921334157815132 0.6049836636139501 1.0106933096462278 0.7797741925368727 0.42968600541359137 0.07102259679366148 3.5618234599273784 1.6184203917871922 0.17186122075769394 0.02932252953141681 1.1985767312056672e-09 8.921334157815132 -0.2309191171093551 GILAADESTGS(ph)IAKR ddPTM_KYSE-520_SHP099_60min_R1 4 GILAADESTGSIAKR 15 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 GILAADESTGS(1)IAKR;GILAADESTGS(1)IAKR;GILAADESTGS(1)IAKR;GILAADESTGS(1)IAKR 230.82 2.1197e-15 3329120000.0 2862340.0 2408310.0 2820540.0 2233850.0 2225820.0 2307620.0 2014690.0 2397660.0 3066820.0 2729970.0 True False 2703560.294266675 2292611.1726529947 3002356.5214235643 2446154.4323685085 2400979.3708165875 2293217.2876118254 2218354.526679589 2389343.077078053 2509962.7962408313 2705784.589684519 0.999177948079709 0.8472999592773576 1.109606630501811 0.9040462576711319 0.8873505230128204 0.8475239663772359 0.819856294228595 0.8830499982101822 0.9276284615596397 1.0 21.367615558762797 -5.500477507259654 24.72597755426492 0.8835479264828922 0.9774338763603911 0.22423739896054096 0.07466626705599191 930.6080865299896 1027184.2043231215 0.02044859374814471 0.030050157023284754 3.158802643151829e-06 5.500477507259654 0.09388594987749899 GILADEDSSRPVWLK ddPTM_KYSE-520_SHP099_60min_R1 2 GILADEDSSRPVWLK 15 1 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 0 ; 178.07 1.3733e-08 913870000.0 1173120.0 1080390.0 654010.0 607350.0 1071340.0 1066480.0 678930.0 758200.0 836670.0 748480.0 False True 1108044.6950432595 1028486.4427015492 696168.5310529985 665072.3613935639 1155648.3629092395 1059823.7027293316 747562.8701182666 755569.9811652105 684751.8187343297 741849.0495086284 1.4936255506119265 1.3863823690045542 0.93842343198271 0.8965063200311191 1.5577944915811315 1.428624466704267 1.0077021337608005 1.018495584331705 0.9230338964347022 1.0 19.500766133412053 -6.850558055022293 8.209457425858739 0.9860762875273075 1.2670904769276587 0.3289090618929368 0.20662636910005927 0.3731011924823913 30.309492413404648 0.09619441423061699 0.06481443670660315 1.4107236430721904e-07 6.850558055022293 0.2810141894003513 GILHLS(ph)PDVYQEMEASR ddPTM_KYSE-520_SHP099_60min_R1 6 GILHLSPDVYQEMEASR 17 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GILHLS(1)PDVYQEMEASR;GILHLS(1)PDVYQEMEASR;GILHLS(1)PDVYQEMEASR;GILHLS(1)PDVYQEMEASR;GILHLS(1)PDVYQEMEASR;GILHLS(1)PDVYQEMEASR 237.5 2.1635999999999998e-23 4990950000.0 2818750.0 2818210.0 2549850.0 2265580.0 2231860.0 2520630.0 2157150.0 2434530.0 3203720.0 2662950.0 True False 2662388.3184611867 2682818.96138055 2714217.41090425 2480900.0420285366 2407494.6844536904 2504897.8131897766 2375215.773755203 2426085.183653574 2622005.207208992 2639358.3347437503 1.008725599481615 1.016466360806222 1.0283626043402583 0.9399633272112715 0.9121515077214511 0.9490556019681093 0.899921675086156 0.919195075453488 0.9934252476041897 1.0 21.331755802012953 -5.2670476836334155 24.049278272237135 0.9383942100634619 1.017713008317227 0.5301188709846999 0.031101414763337477 183.67015868306788 787607.9744585479 0.008490272402270826 0.012992803874947795 5.40694953746841e-06 5.2670476836334155 0.07931879825376509 GILLEDGSES(ph)PAKR ddPTM_KYSE-520_SHP099_60min_R1 6 GILLEDGSESPAKR 14 1 Q08999;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 GILLEDGS(0.145)ES(0.855)PAKR;GILLEDGS(0.112)ES(0.888)PAKR;GILLEDGSES(1)PAKR;GILLEDGS(0.003)ES(0.997)PAKR;GILLEDGSES(1)PAKR;GILLEDGSES(1)PAKR 243.9 1.0188e-18 3335850000.0 4043420.0 3791990.0 3204120.0 2909270.0 3163600.0 3508950.0 3043610.0 3490290.0 4208090.0 3292550.0 True False 3819123.432242068 3609817.1085069687 3410662.7019732627 3185766.1460960796 3412557.3215782717 3487049.3414710825 3351287.8015710902 3478182.9986298135 3444006.933316292 3263380.568565142 1.1702966761002924 1.1061587922900913 1.0451317675991674 0.9762165580022473 1.0457123372156134 1.0685389791985813 1.0269374751607963 1.0658220595335337 1.055349463832399 1.0 21.637935810620395 -4.535876689527842 2.459303300129176 1.0366153867421481 1.1703927283608886 0.7165270525473779 0.027358261849279857 0.18607492068814466 1.9797699257694508 0.007668724643860299 0.04057911209207132 2.9115436836270456e-05 4.535876689527842 0.13377734161874044 GILSLPHQAS(ph)PVSR ddPTM_KYSE-520_SHP099_60min_R1 6 GILSLPHQASPVSR 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 GILSLPHQAS(1)PVSR;GILSLPHQAS(0.998)PVS(0.002)R;GILSLPHQAS(0.602)PVS(0.398)R;GILSLPHQAS(0.944)PVS(0.056)R;GILSLPHQAS(1)PVSR;GILSLPHQAS(1)PVSR 210.2 6.8995e-14 3622860000.0 2293160.0 2362840.0 2285600.0 2222840.0 2144530.0 2298660.0 2052570.0 2384430.0 2800230.0 2412170.0 True False 2165953.843498872 2249325.619704851 2432933.433089303 2434098.045278782 2313292.310293415 2284313.2102953647 2260063.8067527604 2376158.968860146 2291778.8200538224 2390800.050439861 0.9059535711070352 0.9408254861342413 1.0176231310693213 1.018110253440456 0.9675808354896989 0.9554597465710674 0.9453169479132947 0.9938760744224423 0.9585823873611594 1.0 21.189062047637563 -4.54529171553469 6.608592823966012 0.9804256819947207 0.9139869518023344 0.5037272691394329 0.024364250642036043 0.12140068994881373 20.135066168640734 0.006772515508062706 0.019282562337482143 2.8491038820035052e-05 4.54529171553469 -0.06643873019238633 GILTLK ddPTM_KYSE-520_SHP099_60min_R1 2 GILTLK 6 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P0CG38;P0CG39;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;POTEE;POTEF;POTEI;POTEJ;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ; 118.06 0.062959 9902300000.0 6619300.0 8103900.0 5820200.0 4632400.0 7218500.0 8711600.0 6213700.0 6880400.0 6483600.0 6868700.0 False True 6252114.23375259 7714576.479798112 6195379.404649253 5072661.90321816 7786554.882353252 8657227.672996055 6841841.435868028 6856533.498297426 5306341.678255341 6807848.66176773 0.9183685690405995 1.1331885979079537 0.9100348307449827 0.7451196633829094 1.1437614537587841 1.2716539545913048 1.0049931741713354 1.0071512806686063 0.7794447176911088 1.0 22.698767535645352 -7.6080242858633085 10.775339901773998 0.8899569154743223 1.0213325300837834 0.10781648084200868 0.1462993076980102 0.9918367065752933 118.5594499795541 0.10485381497113345 0.03953312988154596 2.465901439512276e-08 7.6080242858633085 0.13137561460946112 GIPATPR ddPTM_KYSE-520_SHP099_60min_R1 2 GIPATPR 7 0 P35573-2;P35573-3;P35573 P35573-2 AGL Glycogen debranching enzyme;4-alpha-glucanotransferase;Amylo-alpha-1,6-glucosidase 0 ; 111.69 0.022121000000000002 577290000.0 689920.0 521580.0 460290.0 363170.0 417030.0 437860.0 412610.0 355630.0 498350.0 424930.0 False True 651648.762278578 496522.51389245933 489961.0298900395 397685.56760895776 449847.8884238802 435127.1533240801 454320.64548554027 354396.4025346656 407862.2023811699 421165.4507905375 1.547251231209535 1.1789250826735072 1.1633457325864955 0.9442502153547793 1.0681025416009435 1.0331501610764513 1.0787224940525622 0.8414659888873961 0.968413248559688 1.0 18.684027567928855 -1.000000000000128 0.6511589988120502 0.9790576374730641 51.6727518256614 0.8501236565474143 0.07048866390807085 80.10215263275468 0.514749065317319 0.0299510168569972 5854.606042539488 0.09999999999997056 1.000000000000128 50.69369418818834 GIPHLVTHDAR ddPTM_KYSE-520_SHP099_60min_R1 4 GIPHLVTHDAR 11 0 P62701;C9JEH7;P22090;Q8TD47 P62701 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 0 ;;; 145.46 8.3459e-05 2773100000.0 1654920.0 1511120.0 1122350.0 1007710.0 1514720.0 1412400.0 1032500.0 1269790.0 1274380.0 1180220.0 False True 1563118.2885987693 1438523.5269626358 1194698.4768234927 1103482.455420942 1633919.846422129 1403584.6876968208 1136875.1762289351 1265385.3948612139 1042984.7165054965 1169764.1689972656 1.3362678820455673 1.2297551635521147 1.0213156707027546 0.9433375415891384 1.3967942340230362 1.199886887371485 0.9718840825869002 1.0817440202035902 0.891619647915489 1.0 20.15778627305406 -6.7610768049568994 24.999864099829054 0.993123913884104 1.1806034127425358 0.35787308095966264 0.13193952794072317 12.911181784839524 890342.1610291294 0.056087123679053524 0.04070640651607411 1.733497401717409e-07 6.7610768049568994 0.18747949885843174 GIPLATGDT(ph)S(ph)PEPELLPGAPLPPPK ddPTM_KYSE-520_SHP099_60min_R1 8 GIPLATGDTSPEPELLPGAPLPPPK 25 0 K7ENA8;O75821;K7ER90;K7EL20;K7EL60 K7ENA8 EIF3G Eukaryotic translation initiation factor 3 subunit G 2 GIPLAT(0.143)GDT(0.935)S(0.922)PEPELLPGAPLPPPK;GIPLAT(0.036)GDT(0.983)S(0.98)PEPELLPGAPLPPPK;GIPLAT(0.252)GDT(0.874)S(0.874)PEPELLPGAPLPPPK;GIPLAT(0.037)GDT(0.982)S(0.982)PEPELLPGAPLPPPK;GIPLAT(0.175)GDT(0.912)S(0.912)PEPELLPGAPLPPPK;GIPLAT(0.469)GDT(0.766)S(0.766)PEPELLPGAPLPPPK;GIPLAT(0.149)GDT(0.931)S(0.92)PEPELLPGAPLPPPK;GIPLAT(0.199)GDT(0.901)S(0.901)PEPELLPGAPLPPPK 146.89 1.3025e-06 1080996000.0 964198.0 853794.0 846667.0 805573.0 809858.0 837968.0 800153.0 807570.0 1005870.0 884709.0 True False 910712.0148589396 812776.4546690778 901244.509535097 882134.4157156462 873589.2171383036 832737.9308835537 881040.273980738 804768.7281582553 823229.3639192266 876871.1665531858 1.038592725586788 0.926905212157845 1.0277958084512213 1.0060023061120247 0.9962572045471823 0.9496696466333686 1.0047545267612574 0.917773053619323 0.9388259020480568 1.0 19.74200536610529 -7.2497434932434235 24.857142697879475 0.9462246068650063 0.9906370185804727 0.19615424233897616 0.03693724761135055 950.770097714913 2020667.708072142 0.01679641204007384 0.009582412731609823 5.626735581825584e-08 7.2497434932434235 0.04441241171546639 GIPLATGDT(ph)SPEPELLPGAPLPPPK ddPTM_KYSE-520_SHP099_60min_R1 4 GIPLATGDTSPEPELLPGAPLPPPK 25 0 K7ENA8;O75821;K7ER90;K7EL20;K7EL60 K7ENA8 EIF3G Eukaryotic translation initiation factor 3 subunit G 1 GIPLAT(0.066)GDT(0.467)S(0.467)PEPELLPGAPLPPPK;GIPLAT(0.111)GDT(0.444)S(0.444)PEPELLPGAPLPPPK;GIPLAT(0.011)GDT(0.555)S(0.433)PEPELLPGAPLPPPK;GIPLAT(0.095)GDT(0.566)S(0.339)PEPELLPGAPLPPPK 174.53 3.5944e-11 4058200000.0 1908363.0 2813015.0 1948621.0 1589213.0 1721533.0 2575812.0 1830727.0 2361009.0 2583678.0 2402161.0 True False 1802502.3001626728 2677873.5369783994 2074232.2275638357 1740251.3257056896 1857007.8529171245 2559735.4018590515 2015794.7513337252 2352819.210842642 2114547.2044221438 2380879.7223929795 0.7570740693910443 1.1247412088028188 0.8712041217601123 0.7309278622258978 0.7799671001652613 1.0751216778335646 0.846659632729236 0.9882142254871513 0.8881369287722146 1.0 21.183063309508164 -6.244211837992518 24.972594199372548 0.9518294696143265 0.8621453587818622 0.16764227967053658 0.1174787566634118 1903.0332601657417 2758588.204945057 0.04005478729562853 0.03996362354631871 5.698862282177099e-07 6.244211837992518 -0.0896841108324643 GIPLATGDTS(ph)PEPELLPGAPLPPPK ddPTM_KYSE-520_SHP099_60min_R1 6 GIPLATGDTSPEPELLPGAPLPPPK 25 0 K7ENA8;O75821;K7ER90;K7EL20;K7EL60 K7ENA8 EIF3G Eukaryotic translation initiation factor 3 subunit G 1 GIPLAT(0.004)GDT(0.128)S(0.869)PEPELLPGAPLPPPK;GIPLAT(0.022)GDT(0.124)S(0.854)PEPELLPGAPLPPPK;GIPLAT(0.032)GDT(0.174)S(0.794)PEPELLPGAPLPPPK;GIPLAT(0.018)GDT(0.109)S(0.873)PEPELLPGAPLPPPK;GIPLAT(0.046)GDT(0.147)S(0.807)PEPELLPGAPLPPPK;GIPLAT(0.025)GDT(0.151)S(0.824)PEPELLPGAPLPPPK 204.53 4.2592999999999995e-16 5004120000.0 3085730.0 4513850.0 3239670.0 2753060.0 2904500.0 4149310.0 3001870.0 3824450.0 4260130.0 4157720.0 True False 2914558.405649751 4296997.870573021 3448504.3118552743 3014709.9946623268 3133067.6256556096 4123412.6171816 3305328.315027942 3811183.8755833437 3486597.781137937 4120885.835457208 0.707265020683686 1.0427364508864811 0.8368356827999013 0.731568433350653 0.7602898383395761 1.0006131646993592 0.8020916975151337 0.9248457801938832 0.8460796829502807 1.0 21.974523065240284 -6.245688542941692 24.900342417170418 0.9029892881302498 0.8248459421475907 0.1791928481111319 0.10351411848428681 1791.553903214147 2832250.8498860714 0.034476113158871266 0.03436232727602797 5.679517696257623e-07 6.245688542941692 -0.07814334598265915 GIQSLGS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 2 GIQSLGSPIK 10 0 O95171-3;O95171-2;O95171;F2Z2X8 O95171-3 SCEL Sciellin 1 GIQSLGS(1)PIK;GIQS(0.01)LGS(0.99)PIK 137.88 0.00026426 968100000.0 2562600.0 1817290.0 1432370.0 1192510.0 1363410.0 1838350.0 1292050.0 1574380.0 1696360.0 1661520.0 True False 2420447.4695835477 1729984.6605920973 1524702.8620730324 1305845.7918587935 1470702.6102582607 1826876.175748693 1422663.0231928292 1568918.843243056 1388343.7857556334 1646800.2254429995 1.469788157778781 1.0505127664326865 0.9258578171878 0.7929594444326196 0.8930668016289788 1.1093489954176148 0.8638953293864919 0.952707449879664 0.8430553775168207 1.0 20.651234120597497 -4.264136264823128 2.3596559982881717 0.9201270991349254 1.5995417752062355 0.7952591801184772 0.08336298118995229 0.24643879990653128 1.658582854347197 0.022328543008466 0.3430273343145822 5.443318357540525e-05 4.264136264823128 0.6794146760713101 GIQSLGS(ph)PIKVNQR ddPTM_KYSE-520_SHP099_60min_R1 2 GIQSLGSPIKVNQR 14 1 O95171-3;O95171-2;O95171;F2Z2X8 O95171-3 SCEL Sciellin 1 GIQSLGS(1)PIKVNQR;GIQSLGS(1)PIKVNQR 155.92 5.9684e-07 2299500000.0 2469500.0 1786930.0 1594860.0 1196090.0 1346290.0 1574310.0 1092590.0 1154140.0 2013350.0 1353100.0 True False 2332511.9121737955 1701083.2005633865 1697667.2274662235 1309766.0339824285 1452235.3636577367 1564484.1473293556 1203039.659850821 1150136.5577183012 1647776.392423251 1341112.5866958702 1.739236463301309 1.2684119271107464 1.2658648082998052 0.9766264569996537 1.0828586489040732 1.166556904207283 0.8970459838981731 0.8575988094720064 1.228663729480696 1.0 20.354998926215828 -1.000000000000331 0.6523488017539102 1.0117331174153743 66.80861836416678 0.7743495890597032 0.11515151330529685 99.9416186995134 0.639329279212393 0.04775344165161275 9500.828782868874 0.09999999999992377 1.000000000000331 65.7968852467514 GIQYIDLS(ph)SDS(ph)EDVVSPNCSNTVQEK ddPTM_KYSE-520_SHP099_60min_R1 1 GIQYIDLSSDSEDVVSPNCSNTVQEK 26 0 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 2 GIQY(0.04)IDLS(0.598)S(0.598)DS(0.765)EDVVSPNCSNTVQEK 88.571 0.0038765 279330000.0 116110.0 130590.0 110350.0 111850.0 105430.0 98174.0 108190.0 105470.0 134840.0 95764.0 True False 109669.1468404533 124316.26038041366 117463.33756624273 122480.19037107141 113726.7411853575 97561.25965020387 119126.90103264755 105104.14918688317 110356.45503978514 94915.60546326471 1.155438521465247 1.3097557537946478 1.2375555841731916 1.2904115163493852 1.1981880179795437 1.0278737534678963 1.255082348695056 1.1073431884450418 1.1626797774839726 1.0 16.534357685695287 -6.006585793178756 21.682737645836855 1.1248568948447473 1.2509622864367493 0.4183036680536538 0.07616323654054988 53.639743434216825 176605.83225926966 0.02275727059237169 0.02480233361095244 9.849500505484502e-07 6.006585793178756 0.12610539159200207 GIQYIDLS(ph)SDSEDVVSPNCSNTVQEK ddPTM_KYSE-520_SHP099_60min_R1 1 GIQYIDLSSDSEDVVSPNCSNTVQEK 26 0 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 GIQYIDLS(0.551)S(0.32)DS(0.129)EDVVSPNCSNTVQEK 184.76 2.5335000000000002e-15 166240000.0 85674.0 89729.0 66159.0 66079.0 53320.0 87232.0 67057.0 72685.0 93951.0 84577.0 True False 80921.49243311521 85418.28415402514 70423.71499814275 72359.12829262421 57515.980650699734 86687.55273093251 73835.77597325305 72432.87269980647 76891.86671197602 83827.71357991025 0.9653310221323806 1.018974280774086 0.8401006300978268 0.8631886186857117 0.6861213099397206 1.0341156764140544 0.8808038871639722 0.8640683326136356 0.917260693728423 1.0 16.355139659685 -9.538962278103458 14.25137881909829 0.9999999036719226 0.8940389465910207 0.09687782525524014 0.09434848721062418 0.0 0.0 0.09319851939052959 0.022603961152842897 2.8909309715865325e-10 9.538962278103458 -0.10596095708090192 GIS(ph)DPLTVFEQTEAAAR ddPTM_KYSE-520_SHP099_60min_R1 7 GISDPLTVFEQTEAAAR 17 0 B8ZZ81;A0A1B0GWA2;O00116;A0A2R8YEL0 B8ZZ81 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal 1 GIS(0.999)DPLT(0.001)VFEQTEAAAR;GIS(1)DPLTVFEQTEAAAR;GIS(1)DPLTVFEQTEAAAR;GIS(1)DPLTVFEQTEAAAR;GIS(0.998)DPLT(0.002)VFEQTEAAAR;GIS(0.999)DPLT(0.001)VFEQTEAAAR;GIS(0.999)DPLT(0.001)VFEQTEAAAR 231.86 1.2519e-19 422630000.0 166570.0 197670.0 175893.9 134049.2 168691.0 197610.0 153157.5 162649.0 179106.0 173167.0 True False 157330.0300509373 188173.636491281 187232.30223419052 146789.19566463842 181966.02197950444 196376.64269029215 168640.15477315575 162084.80858156196 146584.8652948364 171632.87510188727 0.9166660522207105 1.0963729202786736 1.0908883401448755 0.8552510442856547 1.060204939592622 1.1441668303564578 0.9825632453750196 0.9443692444430751 0.8540605359423042 1.0 17.388966392098546 -7.163848077740983 3.5932668608811347 0.9233184864730427 1.0288043599775685 0.1821006026432237 0.08779620841355557 0.39290322963550295 9.376719088699673 0.04667045196015917 0.02486476448495621 6.857280617287903e-08 7.163848077740983 0.10548587350452576 GIS(ph)PIVFDR ddPTM_KYSE-520_SHP099_60min_R1 15 GISPIVFDR 9 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR;GIS(1)PIVFDR 199.68 2.2743999999999998e-06 171483230000.0 23840079.0 20326849.0 18707933.0 18654097.0 19109608.0 20513303.0 19914585.0 20201285.0 20334867.0 20349458.0 True False 22517622.293850753 19350316.6628176 19913876.294931136 20426976.77032125 20613425.430803753 20385271.86695359 21927745.599419978 20131211.45735038 16642567.753081497 20169177.63375875 1.1164373036291388 0.959400378844869 0.9873420055361952 1.0127818367830228 1.022026073899088 1.0107140825034504 1.0871908611047072 0.9981176140595429 0.8251485536636612 1.0 24.265648925758594 -7.545208427333667 23.503899425566452 0.9122602421547036 1.0237589470818722 0.3797590736994684 0.05801851781692961 119.64169001160617 125928.16981149813 0.03685693265732087 0.013933643296959975 2.84965033032917e-08 7.545208427333667 0.11149870492716862 GISCMNTTLSES(ph)PFK ddPTM_KYSE-520_SHP099_60min_R1 1 GISCMNTTLSESPFK 15 0 Q15181 Q15181 PPA1 Inorganic pyrophosphatase 1 GISCMNTTLS(0.002)ES(0.997)PFK 101.9 0.0015745999999999998 0.0 86873.0 91988.0 101070.0 79251.0 101250.0 88343.0 65506.0 85060.0 127060.0 92279.0 True False 82053.981512968 87568.75840319712 107585.13391771779 86782.99121231801 109217.79896630434 87791.61856782805 72127.98575695156 84764.94671315314 103989.10692194522 91461.47985197557 0.8971425090187368 0.9574386785007353 1.176289013602637 0.9488474421447216 1.1941398624105604 0.9598753345114582 0.7886159930244513 0.9267830222115329 1.136971620077051 1.0 16.480876641771456 -6.4937145495810675 24.852048123167897 0.94517040826326 1.0379081430048167 0.07621732601661202 0.1193403084640712 1480.0385695668404 1261206.113409499 0.04278088924112324 0.037661864006373204 3.2083774143031446e-07 6.4937145495810675 0.09273773474155667 GISEDSHLESLQDVGQSAAPT(ph)FMISPETVTGTGK ddPTM_KYSE-520_SHP099_60min_R1 1 GISEDSHLESLQDVGQSAAPTFMISPETVTGTGK 34 0 E7EVA0;P27816-6;P27816 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 GISEDSHLESLQDVGQS(0.096)AAPT(0.442)FMIS(0.374)PET(0.082)VT(0.005)GT(0.001)GK 62.666000000000004 0.014889 429910000.0 137770.0 171870.0 141140.0 203600.0 147270.0 201720.0 133100.0 137890.0 184090.0 168060.0 True False 130127.62346231377 163613.10721787042 150238.11023198452 222950.08278542772 158859.31114832222 200460.99065576546 146555.0469308196 137411.6917737678 150663.896531252 166571.11914870152 0.7812135988961335 0.9822417478735289 0.9019457334489289 1.3384678203812481 0.9537026103937334 1.2034558672611773 0.8798346777029628 0.8249430782241278 0.9045019166663051 1.0 17.34577875585529 GISHVIVDEIHER ddPTM_KYSE-520_SHP099_60min_R1 4 GISHVIVDEIHER 13 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ;;; 239.87 8.452500000000001e-16 3374690000.0 1694320.0 1496710.0 1002330.0 1048740.0 1444740.0 1376750.0 1011720.0 1096200.0 993520.0 1117710.0 False True 1600332.6920568154 1424805.8049924897 1066941.7955847047 1148411.934284822 1558432.8185538615 1368157.1925705182 1113994.531035677 1092397.5380550025 813121.8126010628 1107807.958965222 1.44459396514144 1.2861487349516503 0.9631107873437835 1.0366525398116182 1.4067716393819358 1.235012965467844 1.0055845167209612 0.9860892668395216 0.7339916688814742 1.0 20.079276377912237 -6.984208334644203 2.364086252975491 0.8923780777754605 1.21853071303331 0.47831526689688175 0.1537921482952649 0.2977200679406245 3.321840378202642 0.08935048612766698 0.04953356040025049 1.0370308242403199e-07 6.984208334644203 0.32615263525784954 GISPIVFDR ddPTM_KYSE-520_SHP099_60min_R1 2 GISPIVFDR 9 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 0 ; 130.56 0.0043077 120640000.0 230988.0 204070.0 180252.0 170614.0 191549.0 201034.0 170974.0 194222.0 208531.0 200099.0 False True 218174.63517683768 194266.1708846852 191871.33233339712 186829.10326303044 206622.81653527508 199779.2722362241 188257.72046543937 193548.2892137555 170667.02703872297 198326.27853466643 1.1000793076380035 0.9795281407991956 0.9674528950527299 0.9420289869976745 1.0418327720456795 1.0073262792620983 0.9492323551693774 0.9759084405948969 0.8605366283262923 1.0 17.597516323964445 -6.795827771230056 5.9029560527583484 0.9437388729771417 1.0021255363903987 0.2350160317733242 0.05259897751311734 0.2970977279276003 27.91083416982868 0.022012404742995605 0.015091685484743298 1.600192493375645e-07 6.795827771230056 0.058386663413257045 GISQDRS(ph)PLVK ddPTM_KYSE-520_SHP099_60min_R1 5 GISQDRSPLVK 11 1 Q5T5U3;E7ESW5;Q5T5U3-3;A0A1B0GV73 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 GIS(0.001)QDRS(0.999)PLVK;GISQDRS(1)PLVK;GISQDRS(1)PLVK;GISQDRS(1)PLVK;GIS(0.001)QDRS(0.999)PLVK 239.49 5.122e-14 8295500000.0 9273830.0 8711290.0 8336790.0 8519410.0 8759380.0 8143370.0 7427860.0 8115430.0 9829500.0 7048270.0 True False 8759392.162978237 8292786.55248713 8874192.82273562 9329092.164945975 9448693.37194534 8092544.20720028 8178740.577727706 8087279.467485593 8044710.581530455 6985827.811271081 1.2538803416891626 1.1870871679813486 1.270313706904973 1.3354311639193601 1.3525517128693927 1.1584230853992135 1.1707618336272123 1.1576694539246168 1.151575847396489 1.0 22.73599965252549 -7.7493520892599 0.6043901321757748 1.0065137181970696 1.27173414878693 0.6811273377762437 0.05538714557914114 0.49668016445288604 0.43084599632040255 0.06269883336062458 0.02951331111199248 1.7809343509723822e-08 7.7493520892599 0.26522043058986045 GISQEQMQEFR ddPTM_KYSE-520_SHP099_60min_R1 2 GISQEQMQEFR 11 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 190.57 6.0419000000000005e-06 399170000.0 265860.0 337470.0 242170.0 174001.0 314630.0 346400.0 218992.0 278820.0 302500.0 218397.0 False True 251112.21582122956 321257.4346472027 257780.66568570017 190538.00272469193 339389.59100018063 344237.98910944426 241129.84851595844 277852.83849707746 247573.6254044421 216462.17249029464 1.160074358176778 1.484127369467322 1.1908808948928853 0.8802369510230936 1.5678933048470518 1.5902916668956495 1.1139583685309717 1.2836092112562316 1.1437269734301607 1.0 17.723755405491158 -8.003453107305893 1.4173581505698762 1.0004011071889862 1.2947111710596002 0.16007938293011326 0.2075118781521896 0.8774788309600783 3.9787810112646733 0.20621618282804582 0.06186318909681925 9.920804527661324e-09 8.003453107305893 0.294310063870614 GISS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 8 GISSLPR 7 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 GIS(0.066)S(0.934)LPR;GIS(0.025)S(0.975)LPR;GIS(0.04)S(0.96)LPR;GIS(0.035)S(0.965)LPR;GIS(0.189)S(0.811)LPR;GIS(0.167)S(0.833)LPR;GIS(0.117)S(0.883)LPR;GIS(0.116)S(0.884)LPR 107.9 0.0034048999999999998 20401310000.0 39430100.0 29132000.0 27442700.0 21092800.0 21916840.0 23586440.0 20108870.0 20487330.0 25976400.0 22784650.0 True False 37242833.751044385 27732454.99197649 29211700.351872515 23097453.37021845 23641570.61823858 23439228.279014293 22141670.823258836 20416264.23400879 21259740.571755227 22582795.727189444 1.6491684289649051 1.228034621000752 1.2935378198856902 1.0227898108474391 1.0468841371032898 1.037924115427113 0.9804663289142939 0.9040627423037718 0.9414131371767547 1.0 24.428720765560595 -1.0000000000017408 0.4585851034144443 0.9477831283423749 17.39468581114618 0.9174893381137319 0.06125928051822327 22.130707718754607 0.26200107550615487 0.035981260555703 342.5707128109928 0.09999999999959916 1.0000000000017408 16.446902682803803 GISSHSRS(ph)S(ph)LMPLR ddPTM_KYSE-520_SHP099_60min_R1 1 GISSHSRSSLMPLR 14 1 Q8TD20 Q8TD20 SLC2A12 Solute carrier family 2, facilitated glucose transporter member 12 2 GISSHS(0.389)RS(0.612)S(0.999)LMPLR 91.441 0.01805 0.0 578580.0 440330.0 444670.0 286030.0 250160.0 346970.0 287730.0 509890.0 595870.0 464600.0 True False 546485.0140293642 419175.88585119497 473334.1396971562 313214.2052019445 269846.1687843027 344804.43152801314 316816.5563741902 508121.31059922103 487675.0286603138 460484.00545333006 1.1867622057608043 0.9102941272379944 1.0279057124496118 0.6801847653613861 0.5860055193853015 0.7487869881355933 0.6880077323473931 1.1034505098586296 1.0590487897190157 1.0 18.812791520755795 -9.688694187220058 12.916887124002685 0.9999993063521883 0.8739992472218558 0.02461828150688905 0.19506198906389832 0.0 0.0 0.2050698293048797 0.049736739226553126 2.0478861685492771e-10 9.688694187220058 -0.1260000591303324 GITGVEDK ddPTM_KYSE-520_SHP099_60min_R1 1 GITGVEDK 8 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 0 136.75 0.0052562 296960000.0 260220.0 337770.0 237310.0 174260.0 268940.0 348830.0 232020.0 287810.0 313750.0 313770.0 False True 245785.07786429048 321543.0221968941 252607.3823094252 190821.6180068208 290104.0479407199 346652.8225780814 255474.84589698576 286811.6542853592 256780.90899386347 310990.2419093659 0.7903305144086205 1.0339328341067489 0.8122678729676809 0.6135935868445457 0.932839712781943 1.114674275468453 0.821488302425388 0.9222529058289447 0.8256879939940333 1.0 18.246509787365586 -5.93721001325483 24.999999893491587 0.9357616681025639 0.8214379433088101 0.19421484064878303 0.12284075468023234 126.77924864271708 50476.187761934896 0.039865512681619204 0.045203239362538505 1.1555533122287532e-06 5.93721001325483 -0.11432372479375374 GIVDQSQQAYQEAFEISKK ddPTM_KYSE-520_SHP099_60min_R1 3 GIVDQSQQAYQEAFEISKK 19 1 P63104;B0AZS6;B7Z2E6;H0YB80;P63104-2 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ;; 235.45 6.4388000000000005e-21 1712364000.0 852140.0 740710.0 571600.0 664530.0 617630.0 597750.0 515005.0 582681.0 604140.0 438402.0 False True 804870.095501025 705125.1797716229 608446.2505923365 727686.7314017705 666233.9671660094 594019.2205258951 567066.7313644381 580659.8156097679 494443.40513004834 434518.09935159533 1.8523281232751483 1.6227751636211192 1.4002782657391797 1.6746983209391109 1.5332709227997392 1.367075897211908 1.3050474357929782 1.3363305613189667 1.1379121050834842 1.0 18.729056746530464 -1.0000000000000095 0.09812007247474923 0.6884134359308683 3.845337024328143 0.8408946704573366 0.09647760551147062 52.598911278037946 0.3675703784770262 1.382033307227951 22.3464554306375 0.0999999999999978 1.0000000000000095 3.1569235883972744 GIVVY(ph)TGDR ddPTM_KYSE-520_SHP099_60min_R1 1 GIVVYTGDR 9 0 P05023-2;P05023-4;P05023;P05023-3 P05023-2 ATP1A1 Sodium/potassium-transporting ATPase subunit alpha-1 1 GIVVY(0.984)T(0.016)GDR 95.50200000000001 0.015549 0.0 563050.0 490770.0 579610.0 423850.0 644240.0 562890.0 444300.0 523730.0 686980.0 619670.0 True False 531816.4940876524 467192.6725392112 616972.5880087898 464132.5765648504 694938.0227758206 559376.7947165562 489214.17995013634 521913.3028695011 562241.7493565084 614180.2058959644 0.8658965055896582 0.7606768633282016 1.0045465192235428 0.7556944559744889 1.1314887977577313 0.9107698186081052 0.7965319872796487 0.8497722620482948 0.9154344994500623 1.0 19.228302491609117 -4.746551364899119 24.999485776982446 0.9120347392425537 0.8132867039595816 0.13765127291825163 0.1056716453292711 510.58413097384584 857342.4584871518 0.02655510822719041 0.06963451783161871 1.7924565423167288e-05 4.746551364899119 -0.09874803528297216 GIWKPET(ph)PQDSSGLAPFK ddPTM_KYSE-520_SHP099_60min_R1 1 GIWKPETPQDSSGLAPFK 18 1 A0A0A0MR88;A0A096LPC5;Q641Q2;F8W7U3 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21A 1 GIWKPET(0.993)PQDS(0.003)S(0.004)GLAPFK 76.417 0.012284999999999999 0.0 167190.0 174570.0 129030.0 102480.0 122900.0 127350.0 117950.0 160440.0 178820.0 146980.0 True False 157915.63741499803 166183.39516508774 137347.48025529936 112219.66838826459 132571.53079465468 126555.1614119161 129873.53708106805 159883.4710869775 146350.795685363 145677.87154870958 1.0840056608199178 1.1407593576044377 0.9428163577292189 0.7703274848489413 0.9100320411417283 0.8687329109527832 0.8915117697724111 1.097513777399734 1.004619261178788 1.0 17.152422223277203 -4.787545583366134 8.47093934222582 0.9281381817533984 1.112432934202282 0.40874751221110905 0.0846253239520648 0.1960632104488029 56.01999078822895 0.024289631489704103 0.05229394771366937 1.6310017109900463e-05 4.787545583366134 0.18429475244888371 GIYAYGFEKPSAIQQR ddPTM_KYSE-520_SHP099_60min_R1 1 GIYAYGFEKPSAIQQR 16 1 P60842;P60842-2;J3KT12;J3QS69;J3QL43;Q14240-2;Q14240;E7EQG2;J3KTB5;J3QR64;J3QLN6;J3KS25;J3QKZ9;J3KS93;J3KSN7;E7EMV8;F8WE11;E9PBH4;J3QQP0;J3KT04;I3L3H2;P38919 P60842;I3L3H2 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 0 104.26 0.00080408 473050000.0 226390.0 162500.0 154950.0 155780.0 311830.0 249630.0 203630.0 154250.0 166890.0 170320.0 False True 213831.6954027239 154693.25608252716 164938.32492876568 170585.2843630353 336369.2469300017 248071.9665744531 224214.90763728617 153714.9427522206 136586.98295453662 168811.0973069547 1.2666921713914743 0.9163689979530397 0.9770585438992376 1.0105098958799759 1.992577812099465 1.4695240451128386 1.328200048540582 0.9105736838657931 0.8091113980864426 1.0 17.36505022151192 -7.268403708494574 21.348915226636297 0.894881491275504 1.2788013203808808 0.2535648709000957 0.2935094145767066 120.02368192226179 367910.8083263375 0.17437782519559872 0.08722723804765134 5.3900934094512525e-08 7.268403708494574 0.3839198291053768 GKAEEQAVR ddPTM_KYSE-520_SHP099_60min_R1 5 GKAEEQAVR 9 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;;; 110.54 0.00103 2682220000.0 3547840.0 3312880.0 2472190.0 2230230.0 3291800.0 3391580.0 2568060.0 3010290.0 3005800.0 2919030.0 False True 3351034.242756303 3153724.272065739 2631551.3230438535 2442190.388656901 3550845.932220051 3370411.8911772813 2827664.5666503394 2999848.006596967 2460022.4900518097 2893169.6651709783 1.1582570780750483 1.0900585299339376 0.909573798841948 0.8441227688983717 1.2273203244754074 1.1649548008716935 0.9773587082329761 1.036872480280096 0.8502862862370116 1.0 21.46421949954759 -7.652065236642685 7.780765724784899 0.9260738038987159 1.0487246438844873 0.1568625095422077 0.11690830637839474 0.45754575574734 29.127943760594356 0.0855560315764812 0.03186687138892279 2.2281004346572117e-08 7.652065236642685 0.12265083998577142 GKAS(ph)PFEEDQNR ddPTM_KYSE-520_SHP099_60min_R1 12 GKASPFEEDQNR 12 1 Q8TB72-4;Q8TB72-3;Q8TB72;C9JW01;A0A0A0MR59;Q8TB72-2;A0A0C4DG68 Q8TB72-4 PUM2 Pumilio homolog 2 1 GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR;GKAS(1)PFEEDQNR 184.48 2.3880000000000003e-06 19295020000.0 16017090.0 14273820.0 13196940.0 13043510.0 14135530.0 14111680.0 12651090.0 13266240.0 16554770.0 13732170.0 True False 15128590.088422693 13588084.261759384 14047635.868250562 14283161.268725725 15247915.790836183 14023603.770658078 13929985.63994005 13220222.50980368 13548841.079790745 13610513.657266585 1.1115370418327757 0.998352053708478 1.0321165109555288 1.04942117751008 1.1203042129637333 1.030350809954255 1.0234724412846021 0.971324289641741 0.9954687545945106 1.0 23.698218179018728 -6.8800066654237115 2.3957213037782363 0.9884978705642007 1.0567984464501392 0.43749622496167095 0.03490513445365276 0.297596648613265 3.4592891601696043 0.018039093028989 0.010925635492707395 1.318236506495763e-07 6.8800066654237115 0.06830057588593852 GKDS(ph)LSDDGVDLK ddPTM_KYSE-520_SHP099_60min_R1 1 GKDSLSDDGVDLK 13 1 E5RJ37;P07948-2;P07948 E5RJ37 LYN Tyrosine-protein kinase Lyn 1 GKDS(0.995)LS(0.005)DDGVDLK 120.31 6.573e-05 547130000.0 531770.0 508310.0 428170.0 577110.0 607880.0 592430.0 521460.0 710030.0 795100.0 519360.0 True False 502271.6580427867 483890.0246111346 455770.5232962218 631958.360885551 655716.6976359219 588732.4246192501 574174.2657591673 707567.0716522475 650729.8828399068 514758.8744559657 0.9757416199451123 0.9400324086156736 0.8854058587681717 1.2276784184701044 1.2738327208616473 1.1437052449876945 1.1154237338132267 1.3745602198700417 1.2641450495198263 1.0 18.973537271607597 -5.2657360567481195 24.817694540291754 1.2127315957281501 0.934357199713744 0.6049319332666444 0.0981926235156343 207.00455568179922 1195663.49940429 0.027419194347443977 0.04235398172044156 5.423303925344512e-06 5.2657360567481195 -0.27837439601440617 GKDS(ph)TEMR ddPTM_KYSE-520_SHP099_60min_R1 3 GKDSTEMR 8 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 GKDS(0.777)T(0.223)EMR;GKDS(0.898)T(0.102)EMR;GKDS(0.5)T(0.5)EMR 69.786 0.029635 342270000.0 2143020.0 1612360.0 1420870.0 1708900.0 1832360.0 1918980.0 1883250.0 1464810.0 1812820.0 2027710.0 True False 2024142.4085955438 1534899.8053982991 1512461.5536723803 1871313.342200481 1976556.3072977534 1907002.9340105127 2073627.2887488068 1459728.915999225 1483657.5854733258 2009746.0669345076 1.0071632640052857 0.7637282294770216 0.7525635096673472 0.9311192956107237 0.983485595427795 0.9488775549237868 1.031785718039363 0.7263250517145029 0.7382313665807385 1.0 20.93858179654056 -3.0801184137110313 14.446929115699325 0.8829923253108838 83.29505295709085 0.0 0.1203081992446991 0.0 0.0 0.028779477681133793 0.0 0.0008315370152657192 3.0801184137110313 82.41206063177997 GKDSLS(ph)DDGVDLK ddPTM_KYSE-520_SHP099_60min_R1 1 GKDSLSDDGVDLK 13 1 E5RJ37;P07948-2;P07948 E5RJ37 LYN Tyrosine-protein kinase Lyn 1 GKDS(0.001)LS(0.999)DDGVDLK 167.18 1.2426e-06 748080000.0 544170.0 731770.0 622310.0 1050200.0 883670.0 936240.0 847530.0 1075400.0 1533600.0 790530.0 True False 513983.8053239988 696614.6707908375 662425.0983312044 1150010.6922458557 953209.8016054721 930396.5788794045 933206.6034956998 1071669.6884002471 1255136.8989099255 783526.5192230329 0.655987758823632 0.8890760602227228 0.8454405589080557 1.4677367823953666 1.2165635472692131 1.1874474648311995 1.1910338458245089 1.3677516486141978 1.6019073612907893 1.0 19.579622579388772 -5.189956526475476 6.550269771728328 1.2937119536982924 0.7999884755601211 0.6505733708724883 0.16582049785095357 0.15327118177418003 11.580035035701465 0.04514025064825008 0.0787806409180249 6.457188632196246e-06 5.189956526475476 -0.4937234781381713 GKEDDKIYR ddPTM_KYSE-520_SHP099_60min_R1 2 GKEDDKIYR 9 2 O15541 O15541 RNF113A RING finger protein 113A 0 ; 130.98 0.00037293 1097610000.0 1653100.0 1659900.0 1110260.0 987200.0 1605590.0 1571250.0 1128050.0 1303080.0 1491670.0 1096990.0 False True 1561399.247626848 1580155.9124393035 1181829.1360788103 1081023.1911874975 1731940.7984425535 1561443.2459244074 1242084.3027070703 1298559.9196211593 1220820.329940643 1087271.5220453045 1.436071133997555 1.4533222662420302 1.0869678016174196 0.9942532010347763 1.5929239047708514 1.4361116007040466 1.1423864945625928 1.1943290091681908 1.1228293072958584 1.0 20.05228083590102 -7.58776423880093 1.1537715194636482 1.020078141618924 1.3151634825995984 0.26816439243177215 0.17393037839460185 0.7315216470559516 1.8198761517800688 0.17525976823739728 0.05995454350791674 2.5836623775375095e-08 7.58776423880093 0.2950853409806744 GKEELAEAEIIKDSPDS(ph)PEPPNK ddPTM_KYSE-520_SHP099_60min_R1 3 GKEELAEAEIIKDSPDSPEPPNK 23 2 H0YH12;Q9NVM9-2;Q9NVM9 H0YH12 ASUN Protein asunder homolog 1 GKEELAEAEIIKDSPDS(1)PEPPNK;GKEELAEAEIIKDS(0.004)PDS(0.996)PEPPNK;GKEELAEAEIIKDSPDS(1)PEPPNK 226.57 1.517e-21 4108590000.0 3335960.0 2501620.0 2406250.0 2757300.0 2794360.0 2831620.0 2978150.0 3071790.0 3158750.0 2819770.0 True False 3150907.648728609 2381438.4201918263 2561360.7251361264 3019352.962987529 3014260.234266486 2813946.809243895 3279210.465943052 3061134.6774511742 2585200.6256075404 2794789.0315478626 1.1274223611016227 0.8520995299859515 0.9164773069534861 1.0803509420227309 1.0785287190701016 1.0068548206965813 1.1733302331328022 1.0953008054979374 0.9250074321981133 1.0 21.414307952704974 -5.267075143927066 24.790193970414446 1.0596722284579554 0.9540097116670262 0.15276315020246267 0.09017876254006799 613.7155666290329 2699571.6308881943 0.0249020430972078 0.038147502732642564 5.406607668680569e-06 5.267075143927066 -0.1056625167909292 GKEHDDIFDK ddPTM_KYSE-520_SHP099_60min_R1 1 GKEHDDIFDK 10 1 A0A2R8YFD1;A0A2R8Y3X5;A0A2R8YE78;A0A2R8YDM2;C9JMB8;E5KLJ9;O60313-13;O60313;O60313-9;O60313-11;O60313-2;O60313-10 A0A2R8YFD1 OPA1 Dynamin-like 120 kDa protein, mitochondrial;Dynamin-like 120 kDa protein, form S1 0 88.596 0.0038508 1245100000.0 2472400.0 2311600.0 1520700.0 1437200.0 2363400.0 2503300.0 1863300.0 2211300.0 2206200.0 1898500.0 False True 2335251.043392791 2200547.2662176606 1618726.755206027 1573791.055890063 2549386.13409347 2487675.9761480154 2051660.5480555682 2203629.5164213 1805609.6937761332 1881680.7670106518 1.2410452847975417 1.1694583400103402 0.8602557796121981 0.8363751617604508 1.3548451888274196 1.3220499564865527 1.090334016282133 1.171096370359418 0.9595728060953881 1.0 20.84359046045344 -7.767553633486893 24.812702243005376 0.9797863200587366 1.1256566261166356 0.1204387236050728 0.16265973766746247 361.97009032070366 1468859.9432201902 0.1576119124343306 0.04483279884221725 1.7078367965908963e-08 7.767553633486893 0.14587030605789908 GKEKDS(ph)PFKPK ddPTM_KYSE-520_SHP099_60min_R1 2 GKEKDSPFKPK 11 3 Q15291 Q15291 RBBP5 Retinoblastoma-binding protein 5 1 GKEKDS(1)PFKPK;GKEKDS(1)PFKPK 67.13600000000001 0.017743000000000002 2857800000.0 7017700.0 6291000.0 6385800.0 5720000.0 6035900.0 5408200.0 5036300.0 4777600.0 6967000.0 4276050.0 True False 6628414.191561878 5988770.917016482 6797438.885641263 6263627.0802192865 6510890.99042682 5374445.417730077 5545418.353551362 4761027.620700219 5701968.423777688 4238167.523716558 1.5639811674431527 1.4130566768547117 1.6038627184043952 1.4779092721484854 1.536251446879394 1.2681059414605416 1.3084471820709065 1.1233693793503357 1.3453853326631804 1.0 22.015009184136296 -7.059399700036673 0.44704186809483737 1.026358896323552 1.5669669758094575 0.7489794495924574 0.09314199380183463 0.49357275767563286 0.2366622364466434 0.09782356292048439 0.08377416225491419 8.7216830460176e-08 7.059399700036673 0.5406080794859056 GKFGHEFLEFEFRPDGK ddPTM_KYSE-520_SHP099_60min_R1 2 GKFGHEFLEFEFRPDGK 17 2 P61326;Q96A72;F5H6N1;P61326-2 P61326 MAGOH;MAGOHB Protein mago nashi homolog;Protein mago nashi homolog 2 0 ; 191.93 3.4449e-12 1891320000.0 1907380.0 1939470.0 1577940.0 1300250.0 1640280.0 1306230.0 1115920.0 1084690.0 1448170.0 832260.0 False True 1801573.8291322386 1846294.9499961776 1679656.5371932674 1423825.3690655814 1769360.704083454 1298077.334048584 1228728.08392968 1080927.4635585502 1185218.8333948795 824886.8238884831 2.184025465020392 2.2382403216150526 2.0362266538280176 1.726085722103944 2.1449738956221402 1.5736429488950983 1.4895717186237811 1.3103948714601863 1.436825997302037 1.0 19.6538366667463 -6.470800046395677 0.35439009429387086 0.9833524212426258 2.387772879570316 0.8729808499923533 0.14278392147730964 0.540517074086838 0.15227563377455594 0.1715400022124032 0.279124481034661 3.3822052053755575e-07 6.470800046395677 1.4044204583276905 GKGEKEPPS(ph)PGMER ddPTM_KYSE-520_SHP099_60min_R1 5 GKGEKEPPSPGMER 14 2 P56182 P56182 RRP1 Ribosomal RNA processing protein 1 homolog A 1 GKGEKEPPS(1)PGMER;GKGEKEPPS(1)PGMER;GKGEKEPPS(1)PGMER;GKGEKEPPS(1)PGMER;GKGEKEPPS(1)PGMER 105.91 0.00046996 5283630000.0 4804730.0 4506440.0 4357330.0 3426340.0 3852330.0 3825590.0 3181080.0 3323680.0 5076940.0 3648530.0 True False 4538202.0489082085 4289943.85809566 4638210.463774503 3751978.3234333135 4155486.454240619 3801713.073779439 3502654.6107489956 3312150.9298327444 4155095.6752424138 3616206.862713385 1.2549619590907513 1.186310413358583 1.2826175713560446 1.037545269359412 1.1491285238927376 1.051298561755082 0.9685990718243407 0.915918545474886 1.149020460661556 1.0 21.786045777850106 -5.607473930740525 0.9201783895489392 1.0050077585640753 1.2503514713579602 0.5922829021899766 0.07475160844691328 0.4226157844914832 0.7473634251517944 0.0342401371611691 0.0669081319935094 2.469028308050625e-06 5.607473930740525 0.2453437127938849 GKGEQIAR ddPTM_KYSE-520_SHP099_60min_R1 1 GKGEQIAR 8 1 P61026 P61026 RAB10 Ras-related protein Rab-10 0 68.735 0.026889 212840000.0 301800.0 307440.0 202760.0 194080.0 273780.0 319850.0 261100.0 309000.0 290650.0 255310.0 False True 285058.5523766156 292670.12092315167 215830.23402747064 212525.30484772008 295324.9284048868 317853.6975076665 287494.53609043563 307928.15112114255 237875.28669025176 253048.15202817463 1.1264992456648206 1.156578771974456 0.852921597322868 0.8398611218629145 1.1670700854278715 1.2560996591363225 1.1361258076226761 1.2168757157604435 0.9400396121595327 1.0 17.949052413041407 -5.81052253735353 24.99677371601951 1.1378868410149845 0.9955046220219207 0.17612212931823967 0.12918360160605835 182.512559638866 92947.76940930802 0.04219894133880075 0.04784918887248994 1.5469542239528138e-06 5.81052253735353 -0.1423822189930638 GKGGVTGS(ph)PEASISGS(ph)KGDLK ddPTM_KYSE-520_SHP099_60min_R1 1 GKGGVTGSPEASISGSKGDLK 21 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 GKGGVT(0.196)GS(0.803)PEAS(0.169)IS(0.244)GS(0.588)KGDLK 45.511 0.060792 1115500000.0 768060.0 729920.0 669450.0 647580.0 670920.0 498800.0 459780.0 437340.0 572240.0 509720.0 True False 725454.1807103495 694853.5475677425 712603.8181578711 709125.808497974 723717.5869873866 495686.804179535 506259.04942037794 435822.9696159238 468335.6409964897 505204.2773561589 1.4359620716332906 1.3753912599553957 1.4105260982489658 1.40364173519864 1.4325246626468686 0.9811611389625781 1.0020878130124686 0.8626668243916655 0.9270223194613264 1.0 18.94650732831761 -6.284917222348534 5.638454136284124 0.946001403021802 1.4099919386778155 0.9691257789528891 0.04078654204895594 0.0297080364020876 3.1667634878003725 0.014930607229088707 0.013552288526793393 5.188989329825842e-07 6.284917222348534 0.46399053565601345 GKGGVTGS(ph)PEASISGSK ddPTM_KYSE-520_SHP099_60min_R1 4 GKGGVTGSPEASISGSK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GKGGVT(0.021)GS(0.979)PEASISGSK;GKGGVTGS(0.991)PEAS(0.004)IS(0.001)GS(0.005)K;GKGGVTGS(0.975)PEAS(0.025)ISGSK;GKGGVTGS(0.83)PEAS(0.169)IS(0.001)GSK 332.29 1.8569999999999998e-58 21714700000.0 20879100.0 20595600.0 19458300.0 18695800.0 18241300.0 18899800.0 16986600.0 19480600.0 24846600.0 17726300.0 True False 19720894.70154602 19606156.46137416 20712613.152380772 20472643.210902743 19676786.531200465 18781839.33767515 18703771.301240105 19413026.345406223 20335083.771814924 17569258.772852734 1.1224659478530707 1.1159353228759288 1.1789121795157924 1.1652536669638103 1.1199554167648889 1.069017172579645 1.0645737275006941 1.1049428206614158 1.157424114171272 1.0 24.06654999117041 -6.034802783770225 4.73070935274509 1.0852698516567165 1.1458129870411244 0.37089552723369545 0.04060575921769163 0.2482092880969611 13.419015154423368 0.013568284478151364 0.014148318522377731 9.229904685745883e-07 6.034802783770225 0.06054313538440792 GKGS(ph)LGSQGAKDEPEEELQK ddPTM_KYSE-520_SHP099_60min_R1 1 GKGSLGSQGAKDEPEEELQK 20 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GKGS(0.833)LGS(0.167)QGAKDEPEEELQK 55.468999999999994 0.031304000000000005 870240000.0 541470.0 479440.0 533510.0 474720.0 487180.0 470710.0 405880.0 512570.0 566720.0 412970.0 True False 511433.5797063156 456406.9827458885 567900.9082461823 519837.24607022706 525518.2943249787 467772.1242889905 446910.31140707 510792.0143047372 463817.93384861294 409311.40708579816 1.2494974995874253 1.1150605012340113 1.3874543890420852 1.2700287289116792 1.283908254760224 1.1428269923367615 1.0918589212769987 1.2479300734407999 1.1331664004941582 1.0 18.64283934819751 -6.271147865960019 21.691199675180847 1.1366959461103372 1.260577318539009 0.3963459078089522 0.08434961800852837 136.13271194191202 304151.72716215445 0.029498337114637403 0.026433649009233583 5.356142637580443e-07 6.271147865960019 0.12388137242867181 GKGS(ph)PRPQAPK ddPTM_KYSE-520_SHP099_60min_R1 4 GKGSPRPQAPK 11 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK;GKGS(1)PRPQAPK 78.486 0.0095677 18572300000.0 19419500.0 14728200.0 5547570.0 76381300.0 13179000.0 11920900.0 14891000.0 37718900.0 10876000.0 8340800.0 True False 18342261.623186503 14020635.164521102 5905175.238625838 83640555.78712478 14216112.3217474 11846497.241266664 16396327.60215505 37588061.93955748 8901192.56164865 8266907.001044199 2.2187574652611524 1.6959952691798934 0.7143149472807607 10.117515024247894 1.719641012043773 1.4330023598632868 1.9833690641595483 4.546810788461719 1.076725861380119 1.0 22.978916226543 GKGSLGS(ph)QGAKDEPEEELQK ddPTM_KYSE-520_SHP099_60min_R1 1 GKGSLGSQGAKDEPEEELQK 20 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GKGS(0.004)LGS(0.996)QGAKDEPEEELQK 188.29 4.0629000000000003e-13 1100200000.0 443770.0 445170.0 477240.0 354640.0 392420.0 427650.0 323280.0 344510.0 609400.0 354510.0 True False 419153.19346643664 423783.36498620687 508003.6540109978 388344.8789735957 423301.22143562586 424980.8777212875 355960.29730875563 343314.9752192386 498748.3217238576 351369.31720460654 1.1929134757727258 1.2060909824389496 1.4457826256786708 1.1052327564146924 1.2047187978827774 1.20949911364576 1.013065967571311 0.977077275701117 1.4194418729892415 1.0 18.42262869011598 -5.94746761387713 1.2832918429020426 1.1116895124072272 1.2609844734819526 0.14677470909783275 0.1422824105485516 0.8435025946308812 2.9022249250555627 0.060533881559592655 0.07215552516825641 1.1285800946431715e-06 5.94746761387713 0.1492949610747254 GKHQPWQS(ph)PERPLSR ddPTM_KYSE-520_SHP099_60min_R1 6 GKHQPWQSPERPLSR 15 2 J3QRS2;V9GYU5;J3QL08;V9GYS7;E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52 J3QRS2 ELAC2 Zinc phosphodiesterase ELAC protein 2 1 GKHQPWQS(1)PERPLSR;GKHQPWQS(1)PERPLSR;GKHQPWQS(1)PERPLSR;GKHQPWQS(1)PERPLSR;GKHQPWQS(1)PERPLSR;GKHQPWQS(1)PERPLSR 214.46 2.4814e-14 11808910000.0 4737870.0 4751850.0 5629580.0 4011350.0 4053810.0 4061400.0 3330953.0 3427710.0 5614240.0 3481697.0 True False 4475050.906390311 4523563.993327733 5992471.734446476 4392587.497943644 4372821.783976239 4036051.29610016 3667678.2362085236 3415820.0740435296 4594835.539473173 3450851.8732992793 1.2967960001458478 1.3108542932046685 1.73651954777103 1.272899463442919 1.2671716852904167 1.1695811481590443 1.0628327064939886 0.9898483619285993 1.331507612663814 1.0 21.718521117208578 -5.949872817180498 1.6862889535812409 1.1024729831343631 1.431588974002349 0.4758451732683615 0.14861120719570856 0.32280169741960024 1.8754039121337414 0.05723051537829148 0.06580883352353468 1.1223470846980385e-06 5.949872817180498 0.32911599086798593 GKHS(ph)LDSDEEEDDDDGGSSK ddPTM_KYSE-520_SHP099_60min_R1 1 GKHSLDSDEEEDDDDGGSSK 20 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GKHS(0.5)LDS(0.5)DEEEDDDDGGSSK 143.05 1.2687e-06 1305100000.0 610450.0 544110.0 456860.0 536540.0 577590.0 492460.0 485850.0 518110.0 592100.0 448200.0 True False 576587.1215980949 517970.1388742394 486309.9266018459 587532.6002833667 623043.0469624461 489386.3744712377 534964.4594390586 516312.79733778315 484589.56562634825 444229.29669432325 1.2979493380753946 1.1659972512588643 1.0947272731012123 1.322588592547626 1.4025257937707913 1.1016526332525685 1.2042529914616835 1.1622664267752267 1.09085458620663 1.0 18.76094501545738 -7.795935492429411 0.8909507306267519 1.0009787623534991 1.23473380203088 0.4203770806655269 0.08957631609923672 0.5977330350909942 1.035169061846746 0.09040447626065401 0.0328902398243179 1.599795635285411e-08 7.795935492429411 0.23375503967738087 GKHSLDS(ph)DEEEDDDDGGSSK ddPTM_KYSE-520_SHP099_60min_R1 6 GKHSLDSDEEEDDDDGGSSK 20 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GKHS(0.471)LDS(0.529)DEEEDDDDGGSSK;GKHS(0.046)LDS(0.954)DEEEDDDDGGSSK;GKHS(0.001)LDS(0.999)DEEEDDDDGGSSK;GKHSLDS(1)DEEEDDDDGGSSK;GKHS(0.002)LDS(0.998)DEEEDDDDGGSSK;GKHSLDS(1)DEEEDDDDGGSSK 309.0 1.3237e-53 10600010000.0 10578400.0 8800470.0 8112920.0 9033650.0 8953000.0 9158300.0 8785360.0 8744770.0 10427700.0 8649690.0 True False 9991595.064482404 8377682.211425226 8635891.804330967 9892205.379934084 9657550.164398255 9101139.652601115 9673469.92565097 8714436.433914652 8534292.5409253 8573060.475956986 1.1654641994540544 0.977210208060506 1.0073289262976963 1.1538709434835575 1.1264997128484866 1.0615975097953783 1.1283566647850047 1.016490722111917 0.9954779351970734 1.0 23.0313788897976 -7.4165767601283905 5.9745013845172235 1.0002999536851016 1.083969279578322 0.3129031936890784 0.05755551267421151 0.3119413226979668 14.67160780759516 0.0338816688563381 0.015822309655205247 3.8319800542085076e-08 7.4165767601283905 0.0836693258932204 GKIEVLDS(ph)PASK ddPTM_KYSE-520_SHP099_60min_R1 6 GKIEVLDSPASK 12 1 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 GKIEVLDS(0.952)PAS(0.048)K;GKIEVLDS(0.988)PAS(0.012)K;GKIEVLDS(0.998)PAS(0.002)K;GKIEVLDS(0.988)PAS(0.012)K;GKIEVLDS(1)PASK;GKIEVLDS(0.99)PAS(0.01)K 176.49 7.8044e-07 10841610000.0 13709560.0 12598550.0 11623990.0 9848460.0 11459120.0 11039570.0 9100880.0 9207370.0 11784360.0 10807090.0 True False 12949063.37746969 11993296.747190924 12373290.994441604 10784454.67735253 12360887.550525984 10970667.948709419 10020885.766429426 9175431.782486312 9644617.283540813 10711347.590388805 1.208910761993082 1.1196814075898724 1.155157265696806 1.006825199756315 1.1539992933865106 1.0242098723930217 0.9355392196796112 0.8566085364197633 0.9004111949643797 1.0 23.352636660608653 -6.587773305902857 2.2544392298014975 0.9066607121231731 1.1241165395773198 0.7275736664347436 0.05904369205075614 0.15641912528058902 1.6121602389368623 0.026055632139465275 0.01929817589199907 2.583608436982068e-07 6.587773305902857 0.2174558274541467 GKIEVLDS(ph)PASKK ddPTM_KYSE-520_SHP099_60min_R1 1 GKIEVLDSPASKK 13 2 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 GKIEVLDS(0.999)PAS(0.001)KK 117.3 7.4032e-05 1604700000.0 2742300.0 2267000.0 2292200.0 1952900.0 2014600.0 2084300.0 1744600.0 1601200.0 2192500.0 1877600.0 True False 2590179.1523604775 2158089.9171636268 2439958.879649671 2138503.0288392045 2173137.558493989 2071291.1105681725 1920961.1936552043 1595645.8109228888 1794397.2684272383 1860965.924750695 1.3918466307799118 1.159661167601839 1.3111249632238917 1.1491360483269943 1.1677470982092883 1.1130193643097757 1.0322387788548824 0.8574288167778515 0.9642289762332029 1.0 20.827620208470158 -6.333853575372941 0.7904393854606022 0.9253583240452271 1.2806123018166338 0.7721731123599683 0.07241992362741324 0.28991532490307986 0.3901048767193197 0.049209191586784204 0.04393530951889345 4.636031996020931e-07 6.333853575372941 0.35525397777140666 GKIPNLLPEGSVDGDTR ddPTM_KYSE-520_SHP099_60min_R1 1 GKIPNLLPEGSVDGDTR 17 1 P05120;H7C004;H7BYS2 P05120 SERPINB2;SERPINB10 Plasminogen activator inhibitor 2 0 79.311 0.0090565 695800000.0 1059200.0 1037700.0 777610.0 480030.0 863890.0 928810.0 733340.0 762600.0 877480.0 779600.0 False True 1000444.064537147 987847.3343805459 827735.9848199899 525651.9068737179 931873.2281382778 923012.9522654243 807473.1639086937 759954.7185921782 718151.7514707111 772693.350519622 1.2947491574301329 1.2784467909763126 1.0712347715472803 0.6802852729614235 1.2060065322312017 1.1945397894840368 1.045011146227262 0.9835139878984628 0.9294136554789392 1.0 19.559536457204878 -4.8020763254195975 4.622303216721865 1.0130697082319469 1.2906816680780093 0.3894366541115164 0.13815060804968482 0.20040451076013902 9.444340472495034 0.03847504575331668 0.09031512375612116 1.577334035548738e-05 4.8020763254195975 0.27761195984606246 GKLDDYQER ddPTM_KYSE-520_SHP099_60min_R1 4 GKLDDYQER 9 1 E9PLA9;Q14444-2;Q14444 E9PLA9 CAPRIN1 Caprin-1 0 ;;; 86.014 0.0052732 3433790000.0 3555620.0 3514250.0 2484090.0 2373930.0 3326430.0 3084860.0 2368670.0 2838860.0 2860980.0 2892250.0 False True 3358382.670647254 3345420.1550032124 2644218.4160845294 2599547.5934519228 3588201.1162023027 3065606.2444692818 2608118.2795914654 2829012.6572549073 2341498.151436699 2866626.9151364514 1.1715450841943258 1.1670232137075887 0.9224145640028866 0.9068315028110955 1.2517154210950066 1.0694123564814708 0.9098213185050343 0.9868785652981447 0.8168130073268512 1.0 21.45092272269689 -6.753295034419572 18.58131995740643 0.9272846302482072 1.0779468267226568 0.3156997553312798 0.11035499463507253 10.432374351373618 23802.60225087958 0.04524715777233444 0.03412465631879595 1.7648384847002336e-07 6.753295034419572 0.15066219647444967 GKLEAIIT(ph)PPPAK ddPTM_KYSE-520_SHP099_60min_R1 5 GKLEAIITPPPAK 13 1 D6RCF2;O75367-2;O75367-3;O75367 D6RCF2 H2AFY Histone H2A;Core histone macro-H2A.1 1 GKLEAIIT(1)PPPAK;GKLEAIIT(1)PPPAK;GKLEAIIT(1)PPPAK;GKLEAIIT(1)PPPAK;GKLEAIIT(1)PPPAK 106.16 0.0016644000000000001 14775340000.0 9274700.0 9872410.0 7627200.0 6092080.0 6531400.0 9205320.0 7104330.0 9177550.0 10271260.0 9767600.0 True False 8760213.902343925 9398124.604810487 8118861.515951489 6671069.451549356 7045384.021417472 9147866.18333993 7822505.007979181 9145715.221106267 8406258.101393826 9681066.663077805 0.9048810639590077 0.9707736690476042 0.838632952184459 0.6890841354281605 0.7277487354040802 0.9449233748413874 0.8080209836601052 0.9447011924818892 0.8683194108614173 1.0 23.206734582191086 -8.008935209175329 0.8276699316783196 0.9949524612432086 0.8378475487721467 0.22041837908782125 0.0870754609609141 1.126827485746395 1.753702089158055 0.09202445973116818 0.03353445041865319 9.796361228813642e-09 8.008935209175329 -0.15710491247106184 GKLEAIIT(ph)PPPAKK ddPTM_KYSE-520_SHP099_60min_R1 3 GKLEAIITPPPAKK 14 2 D6RCF2;O75367-2;O75367-3;O75367 D6RCF2 H2AFY Histone H2A;Core histone macro-H2A.1 1 GKLEAIIT(1)PPPAKK;GKLEAIIT(1)PPPAKK;GKLEAIIT(1)PPPAKK 85.56299999999999 0.0024634 12906100000.0 30440600.0 29703900.0 27525200.0 19155000.0 21717700.0 26354500.0 20107100.0 24327600.0 36592600.0 27313900.0 True False 28751999.236168362 28276880.05753712 29299518.43387714 20975485.440839235 23426759.433190178 26190011.789794594 22139721.894385297 24243213.2337045 29948306.26437885 27071920.095892612 1.0620598440865912 1.044509586219831 1.082284460433322 0.774805974845562 0.8653527104915073 0.9674235036534471 0.8178112899256217 0.8955114062036077 1.1062498026847623 1.0 24.690293879602752 -5.227515599728667 24.82642609360212 0.909481766690454 1.0611071732411346 0.3530690158076485 0.0892619328286352 627.6002617613226 459295.5815704757 0.024301657737357835 0.04208909617999459 5.922218140625925e-06 5.227515599728667 0.15162540655068057 GKLEEQRPER ddPTM_KYSE-520_SHP099_60min_R1 3 GKLEEQRPER 10 2 Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;P13693-2;E9PJF7 Q5W0H4 TPT1 Translationally-controlled tumor protein 0 ;; 158.56 5.4819e-05 19792200000.0 6726280.0 5862480.0 4402300.0 3952050.0 6541120.0 5688900.0 4579980.0 5081930.0 4937950.0 4450190.0 False True 6353159.839893245 5580837.661038115 4686079.301929045 4327651.64377284 7055868.930118239 5653393.464909697 5042969.074697338 5064301.970961378 4041342.755589633 4410764.7787954295 1.440376025136457 1.2652766449636494 1.0624187724671192 0.9811567519033993 1.599692861437327 1.2817263555037335 1.143332126650962 1.148168679342821 0.916245358405468 1.0 22.07259739447572 -7.436602213576511 1.7579306867632594 0.9625541958694555 1.2575601987006977 0.3260234384215299 0.16806632357652232 0.5004879930045572 2.7623102605119416 0.15084123602260438 0.05188047489651333 3.6592980684529665e-08 7.436602213576511 0.29500600283124223 GKLPES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 GKLPESPK 8 1 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 UBTF Nucleolar transcription factor 1 1 GKLPES(1)PK;GKLPES(1)PK;GKLPES(1)PK;GKLPES(1)PK;GKLPES(1)PK;GKLPES(1)PK 100.55 0.0017192999999999998 22149390000.0 15074100.0 12224400.0 12076500.0 11684200.0 13300300.0 12457900.0 11856100.0 12309700.0 14313500.0 11899400.0 True False 14237909.623526659 11637121.474801518 12854970.5130832 12794662.855017176 14346957.94164481 12380145.625076644 13054630.292385347 12267000.523805568 11714529.213971857 11793980.573593117 1.207218337751508 0.9867000714633354 1.089960292275337 1.084846865329302 1.2164644372713183 1.0497003575532384 1.1068892483691928 1.0401068958237518 0.9932633974487669 1.0 23.49154738715672 -7.459535010580059 2.1719937438011763 0.9945551114576513 1.103107607080573 0.32828741995349564 0.06386878053914642 0.40720512597275266 3.5313925685968504 0.050861169543495795 0.01762501776601571 3.4710829268039454e-08 7.459535010580059 0.10855249562292169 GKLPES(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 2 GKLPESPKR 9 2 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 UBTF Nucleolar transcription factor 1 1 GKLPES(1)PKR;GKLPES(1)PKR 95.18299999999999 0.0024989 4761600000.0 4454400.0 3707000.0 3643700.0 3397600.0 3774800.0 3496000.0 3674400.0 3842400.0 4265400.0 3329600.0 True False 4207305.552373749 3528910.1556795584 3878578.7321261335 3720506.882474309 4071855.284325976 3474180.167224647 4045844.2106882283 3829071.6112229023 3490910.8819838245 3300102.3343895995 1.2749015412432505 1.0693335533585142 1.175290442271552 1.1273913671414886 1.2338572782710762 1.052749222659256 1.2259753791654961 1.1602887496308938 1.057818979007364 1.0 21.654079331682322 -7.896216914948444 3.2566619171984463 1.0019356487622433 1.161755492380282 0.41390008515603083 0.06635586263847124 0.20703650406551882 4.2055273657986225 0.05850815093591964 0.015697456219197537 1.2699396562078225e-08 7.896216914948444 0.1598198436180387 GKLPIVNEDDELVAIIAR ddPTM_KYSE-520_SHP099_60min_R1 1 GKLPIVNEDDELVAIIAR 18 1 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 0 86.45299999999999 0.0017664000000000002 160520000.0 218100.0 143960.0 158450.0 100940.0 164580.0 110040.0 91854.0 97559.0 178370.0 96581.0 False True 206001.55822842877 137043.94551163452 168663.94052896398 110533.30725128243 177531.50966789495 109353.19954273445 101139.49872865147 97220.59059944181 145982.5043417864 95725.3674788811 2.1520059275183954 1.431636661430097 1.7619565740102754 1.154691908345698 1.8545920934392013 1.1423638521613397 1.0565590019904059 1.0156199256261993 1.5250137783382551 1.0 16.54661367297894 -1.0000000000000453 0.2848665274480215 1.0903361464569548 8.243361769655985 0.5126016591343461 0.26777702918578306 43.57261265943098 0.6165533016644751 0.2840441191246209 156.06349350914996 0.09999999999998957 1.0000000000000453 7.153025623199031 GKLS(ph)AEENPDDSEVPSSSGINSTK ddPTM_KYSE-520_SHP099_60min_R1 7 GKLSAEENPDDSEVPSSSGINSTK 24 1 A0A494C1S7;Q9Y5Q9-2;Q9Y5Q9 A0A494C1S7 GTF3C3 General transcription factor 3C polypeptide 3 1 GKLS(1)AEENPDDSEVPSSSGINSTK;GKLS(1)AEENPDDSEVPSSSGINSTK;GKLS(1)AEENPDDSEVPSSSGINSTK;GKLS(1)AEENPDDSEVPSSSGINSTK;GKLS(1)AEENPDDSEVPSSSGINSTK;GKLS(1)AEENPDDSEVPSSSGINSTK;GKLS(1)AEENPDDSEVPSSSGINSTK 160.47 1.0704e-11 13544360000.0 11874770.0 12202040.0 9405550.0 8949620.0 9233060.0 11717050.0 10256690.0 10691360.0 13097790.0 11117730.0 True False 11216052.836332884 11615835.682764549 10011846.802412098 9800189.19399864 9959649.293074822 11643919.544730976 11293536.320848005 10654274.167542176 10719561.504416686 11019235.561663045 1.0178612457795697 1.0541416977396447 0.9085790703344481 0.8893710583785339 0.9038421256484775 1.0566903193576573 1.0248929027471996 0.9668796086553768 0.9728044603848063 1.0 23.393520807390026 -6.259342293694752 24.993393943445646 1.0034733972528502 0.9540820814490044 0.1770347894518447 0.05333328684231944 402.48680757789907 4796904.653177195 0.020529034983612197 0.019587073597363582 5.503737426487238e-07 6.259342293694752 -0.049391315803845814 GKPES(ph)EGEAK ddPTM_KYSE-520_SHP099_60min_R1 1 GKPESEGEAK 10 1 D6RD44;Q96EI5;Q96EI5-2;D6RIH3;D6RCE9 D6RD44 TCEAL4 Transcription elongation factor A protein-like 4 1 GKPES(1)EGEAK 71.208 0.044143 0.0 351540.0 316740.0 236910.0 259440.0 360010.0 376400.0 357290.0 428470.0 312160.0 332980.0 True False 332039.3754223835 301523.3349635674 252181.59766940228 284097.0995965195 388340.73882330116 374050.74798150884 393408.3600143692 426983.7375756503 255479.61291322534 330030.05625451985 1.0060882914443223 0.9136238631884848 0.7641170641589059 0.8608218985286092 1.1766829458823955 1.1333838869907054 1.1920379752048156 1.293772277656916 0.7741101395813446 1.0 18.33223789295265 -5.7552585884813166 24.94437438837162 1.1164577973017715 0.8794066870260692 0.3341651355041778 0.14236813499354145 150.80875683868177 608628.97872717 0.042016626266458246 0.0528592509045343 1.7568772191498885e-06 5.7552585884813166 -0.23705111027570236 GKPSEQLT(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 GKPSEQLTPTR 11 1 H0Y613;Q14687-2;Q14687-3;Q14687 H0Y613 GSE1 Genetic suppressor element 1 1 GKPSEQLT(0.845)PT(0.155)R;GKPS(0.003)EQLT(0.975)PT(0.021)R 97.86 0.0061765 1069650000.0 2192720.0 1996570.0 1753850.0 1549400.0 1642820.0 2062950.0 1979550.0 1816340.0 2281550.0 2113220.0 True False 2071085.4505210486 1900651.7802873317 1866905.9772592175 1696654.5101559022 1772100.5876328312 2050074.3638375544 2179662.2325462336 1810039.540476942 1867278.0331950563 2094498.5148602843 0.9888216371732317 0.907449571724388 0.8913379331680984 0.8100528590105395 0.8460739289428625 0.9787900775734408 1.0406606722715344 0.8641875502106444 0.8915155680211189 1.0 20.99817343056157 -6.268120863209169 24.972573848155704 0.9518943644743378 0.8855582304552948 0.2110281835053709 0.06378958694336338 962.1102883130707 3595953.3073601276 0.02409739164969206 0.021709868124949107 5.393604987735302e-07 6.268120863209169 -0.06633613401904304 GKQS(ph)PPGPGK ddPTM_KYSE-520_SHP099_60min_R1 1 GKQSPPGPGK 10 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 GKQS(1)PPGPGK 114.87 0.000947 705790000.0 642280.0 587910.0 572450.0 574220.0 580020.0 600120.0 597380.0 604570.0 707660.0 594290.0 True False 606651.4480465627 559665.9211290984 609351.042952385 628793.6961544622 625664.2741376376 596374.4284767889 657769.0002669642 602472.8877776986 579166.7826568845 589025.0529506239 1.0299246950662664 0.9501563954292678 1.0345078531039409 1.0675160470757972 1.0622031626727515 1.012477186648258 1.1167080194161163 1.022830666980479 0.983263410878101 1.0 19.167969471818463 -4.922913529634878 9.581863997173208 1.0427347228822692 0.990243021741922 0.17394526222393136 0.040400714174022904 0.48797052537514735 56.29965904677051 0.010408808707837875 0.021730045054452998 1.1942258575802018e-05 4.922913529634878 -0.05249170114034718 GKRPSGRDT(ph)PISEGPK ddPTM_KYSE-520_SHP099_60min_R1 1 GKRPSGRDTPISEGPK 16 3 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 GKRPS(0.001)GRDT(0.999)PISEGPK 203.89 5.3226e-13 1012100000.0 1341900.0 1244200.0 1256500.0 1198000.0 1126600.0 1060300.0 1010300.0 1213600.0 1454800.0 946770.0 True False 1267462.1319886704 1184426.7644177263 1337496.0004710818 1311857.5598081676 1215257.010522849 1053682.2744016855 1112430.9835778147 1209390.3048563695 1190644.9925235782 938382.3543759149 1.350688369275246 1.2622005932810265 1.425320919808433 1.3979989645911852 1.2950552670303286 1.1228709379370763 1.185477303990497 1.2888033318366183 1.268827133173699 1.0 19.839816359186745 -6.042276648201155 5.421584936851291 1.1926923798834288 1.356200870831973 0.512028453911189 0.08518227877386551 0.1885678122096924 13.874009407667256 0.028314927186444655 0.029136917399429738 9.072424271788612e-07 6.042276648201155 0.16350849094854425 GKS(ph)DS(ph)EDGEKENEK ddPTM_KYSE-520_SHP099_60min_R1 7 GKSDSEDGEKENEK 14 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 2 GKS(1)DS(1)EDGEKENEK;GKS(1)DS(1)EDGEKENEK;GKS(1)DS(1)EDGEKENEK;GKS(1)DS(1)EDGEKENEK;GKS(1)DS(1)EDGEKENEK;GKS(1)DS(1)EDGEKENEK;GKS(1)DS(1)EDGEKENEK 166.28 2.4601000000000003e-08 17183600000.0 25190530.0 20604740.0 18803430.0 22592080.0 21275020.0 22974940.0 23022740.0 21450770.0 25740580.0 20583460.0 True False 23793161.084823415 19614857.362054706 20015529.18435173 24739224.490643475 22949243.035694867 22831544.87733872 25350103.23948953 21376362.285517376 21066739.539216775 20401106.558089558 1.1662681637917733 0.9614604632451623 0.9811001735302963 1.2126413055194667 1.1249018758051097 1.11913267117785 1.2425847180057774 1.0478040602675596 1.032627297898372 1.0 24.28214407045597 -3.9474897181189337 19.33516945449716 1.0889014752892505 1.9676187338749305 0.06821391214267469 0.09042213436028544 514.0953935383935 202658.29314861126 0.022928264205846392 37977.182431215566 0.00011285226548793486 3.9474897181189337 0.87871725858568 GKS(ph)DSEDGEKENEK ddPTM_KYSE-520_SHP099_60min_R1 6 GKSDSEDGEKENEK 14 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 GKS(0.999)DS(0.001)EDGEKENEK;GKS(1)DSEDGEKENEK;GKS(0.957)DS(0.043)EDGEKENEK;GKS(0.998)DS(0.002)EDGEKENEK;GKS(0.997)DS(0.003)EDGEKENEK;GKS(0.978)DS(0.022)EDGEKENEK 194.27 5.4709e-11 11441370000.0 12683470.0 11411010.0 9807290.0 11292290.0 11716450.0 12073980.0 11441740.0 11890320.0 14259050.0 12682530.0 True False 11979892.635229394 10862807.951324785 10439483.605618821 12365505.84644921 12638467.95751857 11998621.812204523 12598382.739821455 11849075.25514156 11669965.96139904 12570172.651059033 0.9530412165198138 0.8641733294259564 0.8304964375122802 0.9837180593861946 1.0054331239797079 0.9545311862676479 1.0022442085359937 0.9426342488735251 0.9283854951996899 1.0 23.58350112949232 -5.277396039392692 24.981921310705307 0.9731534098989778 0.8807306271640144 0.5548028564217564 0.0374558674922989 575.5128047017703 901027.6128278966 0.010763290906861196 0.016021050821139814 5.279635745970542e-06 5.277396039392692 -0.0924227827349634 GKS(ph)EEELEASK ddPTM_KYSE-520_SHP099_60min_R1 2 GKSEEELEASK 11 1 Q7RTP6;J3QR21;A0A5F9ZHV5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 GKS(0.999)EEELEAS(0.001)K;GKS(0.984)EEELEAS(0.016)K 157.09 4.5348e-05 1049800000.0 1082710.0 883080.0 877900.0 836710.0 1000180.0 965760.0 831680.0 935900.0 1129820.0 969500.0 True False 1022649.917971126 840655.5112698964 934490.838689664 916230.666833965 1078888.4757542533 959732.3336095179 915754.3308146052 932653.5813407014 924673.1684444522 960910.9842595865 1.0642504193654434 0.8748526398807368 0.9725051060892179 0.9535021264638273 1.1227767123357137 0.9987734028756297 0.9530064135131351 0.9705931107233015 0.9622880616324135 1.0 19.874043264941143 GKS(ph)SEPVVIMK ddPTM_KYSE-520_SHP099_60min_R1 1 GKSSEPVVIMK 11 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 GKS(0.889)S(0.111)EPVVIMK 96.163 0.0021561999999999996 0.0 678950.0 822160.0 801800.0 848170.0 746530.0 923190.0 1080800.0 1499200.0 1637800.0 1064400.0 True False 641287.2900467296 782662.1995126809 853485.3109253586 928779.8217883917 805277.663825334 917428.0287700582 1190057.8115915086 1493999.6251159108 1340416.8055781662 1054970.2440906693 0.6078723960593663 0.7418808292430047 0.8090136339921317 0.8803848516020968 0.7633178929320821 0.8696245547293464 1.1280486992477003 1.4161533308493097 1.2705730925458825 1.0 20.00877087696921 -6.778437228840308 2.6561142310913626 1.2609374283981878 0.7714993987290453 0.7655348891676881 0.11667986138025227 0.12317888877386342 1.7762046936147304 0.05356827531549521 0.03560288694603034 1.6655695450425843e-07 6.778437228840308 -0.4894380296691425 GKS(ph)SPICSTTGDDK ddPTM_KYSE-520_SHP099_60min_R1 1 GKSSPICSTTGDDK 14 1 Q12802-2;Q12802;Q12802-4;H0YMW2 Q12802-2 AKAP13 A-kinase anchor protein 13 1 GKS(0.5)S(0.5)PICSTTGDDK 122.31 5.8457e-05 343800000.0 202690.0 179430.0 152010.0 164840.0 152940.0 174640.0 176600.0 165640.0 164830.0 184120.0 True False 191446.3816475022 170809.91347007928 161808.80782459935 180506.34403904664 164975.50789043517 173550.00698058124 194452.45144990768 165065.43350066646 134901.02702616263 182488.8400431923 1.0490854213451617 0.9360019682828342 0.886677825264831 0.9891363438790206 0.9040306675815794 0.9510170974811645 1.0655580440090682 0.9045234407846421 0.7392289139118514 1.0 17.47744871428351 -7.520256276560247 24.992257497900834 0.8537016930268634 0.9636238419826393 0.20401906736904407 0.07952754017446406 147.82059122090902 1408819.729464466 0.04933514349047038 0.019371497139793088 3.0181701768529265e-08 7.520256276560247 0.1099221489557759 GKS(ph)SPICSTTGDDKLCADSACQQNTVTSSGDLVAK ddPTM_KYSE-520_SHP099_60min_R1 2 GKSSPICSTTGDDKLCADSACQQNTVTSSGDLVAK 35 2 Q12802-2;Q12802;Q12802-4;H0YMW2 Q12802-2 AKAP13 A-kinase anchor protein 13 1 GKS(0.386)S(0.386)PICS(0.076)T(0.076)T(0.076)GDDKLCADSACQQNTVTSSGDLVAK;GKS(0.282)S(0.282)PICS(0.145)T(0.145)T(0.145)GDDKLCADSACQQNTVTSSGDLVAK 245.12 1.7617999999999997e-31 2976290000.0 1247730.0 1385010.0 1094320.0 953550.0 980025.0 1136810.0 920409.0 1256260.0 1481100.0 1205230.0 True False 1178515.929611911 1318472.0406576074 1164861.6181739077 1044175.1053047376 1057147.3919205177 1129714.7471117408 1013452.9240461967 1251902.3272732883 1212169.575492626 1194552.5998547527 0.9865751660958324 1.1037371153165816 0.9751446845585074 0.8741139615214101 0.8849734972315642 0.9457220613383658 0.8483953943672501 1.048009378093111 1.0147477604921 1.0 20.188038950852903 -4.969294187668472 9.437041209071152 0.9393928668676398 1.0440360009500322 0.2609638977216011 0.06599956136660104 0.413260642331346 118.71075654731135 0.017938398424331082 0.03722357544158681 1.0732621467047391e-05 4.969294187668472 0.10464313408239245 GKS(ph)SPVLK ddPTM_KYSE-520_SHP099_60min_R1 1 GKSSPVLK 8 1 A0A0J9YYE2;Q8IXZ2 A0A0J9YYE2 ZC3H3 Zinc finger CCCH domain-containing protein 3 1 GKS(0.5)S(0.5)PVLK 56.093999999999994 0.03285 460160000.0 892310.0 720990.0 629730.0 670630.0 672120.0 702800.0 624800.0 680800.0 792650.0 691160.0 True False 842811.7855241138 686352.5581719466 670323.403403625 734366.4735677376 725012.0201603201 698413.5645095761 687960.8814603767 678438.463699915 648724.7410804328 685036.860114344 1.230315964871488 1.0019206237418858 0.9785216569101652 1.0720101593440674 1.0583547577853016 1.0195269848588866 1.00426841461574 0.9903678228156545 0.946992459605969 1.0 19.38582209239824 -4.260063887551781 24.932648810138733 1.0105918228025428 1.2303160390612446 0.7895161232710816 0.03441379784245924 55.7276323715003 1010028.9056569863 0.009307365259903187 0.0566438523564555 5.4946003875550934e-05 4.260063887551781 0.21972421625870187 GKSDS(ph)EDGEKENEK ddPTM_KYSE-520_SHP099_60min_R1 1 GKSDSEDGEKENEK 14 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 GKS(0.145)DS(0.855)EDGEKENEK 58.672 0.047845 0.0 193110.0 158410.0 141670.0 149150.0 185240.0 175760.0 165990.0 173050.0 181840.0 166450.0 True False 182397.80334475896 150799.7458217425 150802.27488001465 163325.1711564173 199817.33412857482 174663.0166451382 182769.88910628657 172449.72994017368 148822.43981336767 164975.3824961405 1.105606185510896 0.9140742305917694 0.9140895605048382 0.9899972267695042 1.2111948528638776 1.0587216953367231 1.1078615872314306 1.0453058349127213 0.9020887696190024 1.0 17.33189123708725 -3.9236326464869693 19.71874211753667 1.0228485724339462 3.7584831526895988 0.0746835998870441 0.09183535373103484 1047.5587452354002 275505.7056728902 0.023990330029218774 2339.8186770941556 0.00011922500615133228 3.9236326464869693 2.7356345802556525 GKSS(ph)PICSTTGDDKLCADSACQQNTVTSSGDLVAK ddPTM_KYSE-520_SHP099_60min_R1 1 GKSSPICSTTGDDKLCADSACQQNTVTSSGDLVAK 35 2 Q12802-2;Q12802;Q12802-4;H0YMW2 Q12802-2 AKAP13 A-kinase anchor protein 13 1 GKS(0.218)S(0.733)PICS(0.016)T(0.016)T(0.016)GDDKLCADSACQQNTVTSSGDLVAK 94.92 0.0008216000000000001 2687400000.0 563830.0 613850.0 459190.0 406880.0 464900.0 474680.0 421340.0 501550.0 556790.0 552400.0 True False 532553.2259327613 584359.724592365 488790.1221299774 445549.75286706735 501484.9850808382 471717.34604639467 463933.15908213076 499810.24011264974 455690.97153368377 547506.1657606967 0.9726890019454666 1.0673116781807643 0.8927572924240219 0.8137803384333167 0.9159439955969858 0.8615744909301574 0.8473569579578142 0.9128851351257771 0.8323029036587262 1.0 19.06251568620504 -4.829622719050434 6.997191856909931 0.8772104743840926 1.0194033228728585 0.4945014591272523 0.054451607103047375 0.13806548136564648 11.472625141127379 0.01309708104413753 0.027818150658985873 1.4803938796977679e-05 4.829622719050434 0.1421928484887659 GKT(ph)ANSPGSGARPDPVR ddPTM_KYSE-520_SHP099_60min_R1 1 GKTANSPGSGARPDPVR 17 2 Q13206;E9PIF2;A0A3B3ISR7 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 GKT(0.668)ANS(0.329)PGS(0.003)GARPDPVR 89.04899999999999 0.0041332999999999995 786700000.0 713800.0 915910.0 1019800.0 480220.0 504690.0 514350.0 380970.0 336860.0 925960.0 467300.0 True False 674204.0910749773 871908.3087910627 1085537.9397376906 525859.9644165919 544406.231706707 511139.7508615549 419482.165508898 335691.5112837154 757829.005552058 463160.0855538981 1.4556610383830666 1.882520398424096 2.3437640107512374 1.135374098110614 1.1754169858044778 1.103591969179031 0.9056958459778216 0.7247850619127905 1.636213976957367 1.0 18.821151403811786 -5.352001919062434 7.605188940733704 1.0778871336225562 1.890985599068574 0.6024357669455604 0.29644234011337717 0.18309123884329023 13.58222375102988 0.08367252988537838 0.12441704044643831 4.446293027347807e-06 5.352001919062434 0.8130984654460178 GKT(ph)LMMFVTVSGSPTEK ddPTM_KYSE-520_SHP099_60min_R1 2 GKTLMMFVTVSGSPTEK 17 1 Q14696 Q14696 MESDC2 LDLR chaperone MESD 1 GKT(0.999)LMMFVTVSGSPTEK;GKT(0.999)LMMFVTVSGSPTEK 53.403 0.034213 6309000000.0 3198550.0 3404080.0 2360160.0 1827730.0 2595160.0 3278210.0 2399920.0 3452790.0 4003730.0 3536400.0 True False 3021120.0553486524 3240542.887171752 2512299.689989516 2001436.9096729397 2799384.3275594497 3257749.4753997456 2642527.3345620795 3440813.077377248 3276753.5578199243 3505070.2472775653 0.861928532729179 0.9245300831527484 0.7167615804393229 0.571011925146859 0.7986671108043466 0.9294391397519303 0.7539156559314512 0.9816673660249101 0.9348610232177293 1.0 21.741011927792144 -7.26661742768155 24.734930373418397 0.9686981630249334 0.7926604575646169 0.4014432460403018 0.0998073074057783 441.8728366536321 2110753.8734419146 0.05803975568991937 0.029215537940412276 5.412308861768254e-08 7.26661742768155 -0.1760377054603165 GKT(ph)PEEIRK ddPTM_KYSE-520_SHP099_60min_R1 1 GKTPEEIRK 9 2 E5RJR5;P63208;E7ERH2;F8W8N3;P63208-2 E5RJR5 SKP1 S-phase kinase-associated protein 1 1 GKT(1)PEEIRK 117.98 0.00063166 4928700000.0 7936900.0 6947200.0 6336300.0 5875900.0 6630800.0 6651400.0 5582400.0 6620200.0 7761200.0 5163700.0 True False 7496624.335182103 6613446.0840402 6744748.036438459 6434343.769346244 7152606.235908841 6609886.145388448 6146723.470973752 6597236.071366288 6351961.723930429 5117953.63529781 1.4647698805786231 1.2922051576294455 1.3178603240797016 1.2572102500048996 1.397551979873033 1.291509579102278 1.2010119491080695 1.2890378736270829 1.2411135732300969 1.0 22.28713564705931 -13.881972895531918 0.13111370494086413 2.8871291715091463e-20 1.4304695299588275 0.7516384449634206 0.05816036435748624 70.16281308921053 0.5948902387531352 18.433290967820426 0.4368642228229576 1.312281796422102e-14 13.881972895531918 1.4304695299588275 GKTANS(ph)PGSGARPDPVR ddPTM_KYSE-520_SHP099_60min_R1 3 GKTANSPGSGARPDPVR 17 2 Q13206;E9PIF2;A0A3B3ISR7 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 GKT(0.197)ANS(0.552)PGS(0.251)GARPDPVR;GKT(0.088)ANS(0.823)PGS(0.088)GARPDPVR;GKT(0.266)ANS(0.727)PGS(0.007)GARPDPVR 76.329 0.010357 974470000.0 1264760.0 1535590.0 1675880.0 847680.0 901950.0 991360.0 675960.0 636560.0 1634790.0 831590.0 True False 1194601.2415634461 1461817.9514324174 1783909.9063028086 928243.2523357151 972928.333606501 985172.5545136806 744292.63353386 634351.921934221 1337953.345702243 824222.7595672297 1.4493669674818117 1.7735714459037342 2.1643540967486468 1.1262043441060798 1.180419155274663 1.1952746306483457 0.9030236363827927 0.7696365024757347 1.6232909491661638 1.0 19.652674776275834 -5.287737261952362 21.45349662653168 1.1017453291128005 1.7935445131416898 0.58070968675453 0.2653377031399622 84.2355602884668 68718.03071774762 0.07472353369231532 0.11092180589512013 5.155404402180482e-06 5.287737261952362 0.6917991840288893 GKTANSPGS(ph)GARPDPVR ddPTM_KYSE-520_SHP099_60min_R1 1 GKTANSPGSGARPDPVR 17 2 Q13206;E9PIF2;A0A3B3ISR7 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 GKT(0.017)ANS(0.405)PGS(0.578)GARPDPVR 88.755 0.0013737 1101800000.0 1049600.0 1113300.0 1218900.0 643630.0 709210.0 679930.0 473670.0 473520.0 1220200.0 595420.0 True False 991376.595674274 1059815.3969026308 1297472.2443089548 704800.4016855852 765020.7921470875 675686.3046627721 521553.1861737137 471877.46964039915 998642.4387388444 590145.0420297502 1.6798863416093854 1.7958558005630143 2.1985650169090927 1.194283356616008 1.2963267293000855 1.1449495573813693 0.8837711901804326 0.7995957536429003 1.6921983031562962 1.0 19.170710048742993 -5.343303717237373 6.707478469722921 1.127480699907222 1.8798568473050115 0.6318055253926973 0.2612247747479469 0.15516444411173244 10.691115321671187 0.07452139791425391 0.11116707920574714 4.53624270466656e-06 5.343303717237373 0.7523761473977895 GKTEESGEDRGDGPPDRDPT(ph)LSPSAFILR ddPTM_KYSE-520_SHP099_60min_R1 2 GKTEESGEDRGDGPPDRDPTLSPSAFILR 29 3 Q9H7N4;M0R2L3;M0R232;M0R3G4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 GKTEESGEDRGDGPPDRDPT(0.8)LS(0.147)PS(0.053)AFILR;GKTEESGEDRGDGPPDRDPT(0.544)LS(0.43)PS(0.026)AFILR 108.71 0.00038946 1090000000.0 507140.0 486980.0 550930.0 456160.0 441630.0 412320.0 431340.0 482240.0 617830.0 425150.0 True False 479007.9332414742 463584.7498281179 586443.8293191667 499513.3092504952 476383.7684690265 409746.5579376619 474944.0566727248 480567.22199566243 505647.646226864 421383.501761695 1.136750563889821 1.1001492651942717 1.3917104653300314 1.1854125924773034 1.130523066226821 0.9723839595632432 1.1271064355559888 1.1404509668426401 1.1999702031828072 1.0 18.684774304509133 -5.795557646949104 3.9760076307857513 1.095429333110635 1.2109560298006796 0.24587674636034718 0.09454938234678154 0.33535746090346846 11.361578812751848 0.03098301635600035 0.03714374131964701 1.6011880973244313e-06 5.795557646949104 0.11552669669004456 GKTEESGEDRGDGPPDRDPTLS(ph)PSAFILR ddPTM_KYSE-520_SHP099_60min_R1 1 GKTEESGEDRGDGPPDRDPTLSPSAFILR 29 3 Q9H7N4;M0R2L3;M0R232;M0R3G4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 GKTEESGEDRGDGPPDRDPT(0.41)LS(0.484)PS(0.106)AFILR 65.736 0.038338 344320000.0 153730.0 155420.0 169700.0 147830.0 170230.0 134950.0 132340.0 162680.0 174150.0 140860.0 True False 145202.2904468428 147953.38990982386 180639.13352960045 161879.7187532899 183626.1325237926 134107.72699283922 145718.21871393456 162115.70104979756 142528.74996424335 139612.08998742167 1.0400409481723594 1.0597462578144465 1.2938645467299796 1.1594964216055674 1.3152595347604663 0.9605738801340317 1.0437363893561298 1.1611866928172434 1.0208911705074 1.0 17.091064354448964 -6.277720518757348 24.99491645988036 1.0477554752075786 1.1732405873616243 0.34052698936621884 0.09434895397781626 1130.1386672980964 1734991.438975523 0.034674686258121375 0.030665921001032492 5.275692585034856e-07 6.277720518757348 0.12548511215404567 GKTPEEIR ddPTM_KYSE-520_SHP099_60min_R1 1 GKTPEEIR 8 1 E5RJR5;P63208;E7ERH2;F8W8N3;P63208-2 E5RJR5 SKP1 S-phase kinase-associated protein 1 0 54.608000000000004 0.060940999999999995 300550000.0 908660.0 810320.0 599740.0 620100.0 880890.0 887930.0 631710.0 748230.0 761370.0 720600.0 False True 858254.8184311978 771391.0108848826 638400.2000179288 679034.1175601361 950211.0314215095 882388.0995090901 695569.4116954769 745634.564768195 623124.4005758015 714216.0446183163 1.2016739541182628 1.0800527609221116 0.8938474637028013 0.950740497468127 1.3304252103847807 1.2354638434097998 0.9738921674144069 1.0439902189073182 0.8724592583310068 1.0 19.446001018373778 -6.840779797989612 24.999621377265672 0.976249084808154 1.1059874910010208 0.22984072362721086 0.12727955854638842 61.723596817747406 19444.769193985663 0.05916498387681831 0.039889032661285274 1.4428467382508397e-07 6.840779797989612 0.1297384061928668 GKTPEEIRK ddPTM_KYSE-520_SHP099_60min_R1 1 GKTPEEIRK 9 2 E5RJR5;P63208;E7ERH2;F8W8N3;P63208-2 E5RJR5 SKP1 S-phase kinase-associated protein 1 0 63.283 0.021006 328750000.0 484160.0 494700.0 334830.0 279350.0 479140.0 436760.0 341550.0 371580.0 409090.0 351720.0 False True 457302.67965096876 470933.8694401612 356413.6775469418 305899.3400103599 516845.5920663219 434034.01883210405 376077.2072067723 370291.07570742356 334809.5683196804 348604.03443401895 1.3118112083626028 1.3509134230323887 1.0224026182760688 0.8774979914016403 1.4826150618292582 1.245063097266749 1.0788091073511463 1.062211102371821 0.9604294134554847 1.0 18.411229740470322 -6.981805673919086 3.0033821871944997 1.0112968091783472 1.2084569731487924 0.2563767586316015 0.16058852386387065 0.43573678575956293 8.018892572152202 0.08637894628873902 0.05073469883318956 1.0427839211217015e-07 6.981805673919086 0.19716016397044522 GKYS(ph)PTVQTR ddPTM_KYSE-520_SHP099_60min_R1 1 GKYSPTVQTR 10 1 K7EKI8;O60437 K7EKI8 PPL Periplakin 1 GKYS(0.931)PT(0.069)VQTR 126.56 0.00027389 5909600000.0 9555800.0 7085800.0 6515700.0 6537400.0 5752200.0 5552600.0 5569700.0 6907500.0 8563800.0 5468700.0 True False 9025720.724984959 6745387.53199737 6935712.447488612 7158712.530459019 6204865.41445902 5517944.163767606 6132739.631033702 6883539.494722621 7008829.795829956 5420251.572584223 1.6651848358178234 1.244478681785864 1.2795923500247903 1.320734367140444 1.1447559825162719 1.0180236267404108 1.1314492600404864 1.2699667907555707 1.2930820095659037 1.0 22.36992838291381 -1.0000011580235615 0.8406140364672385 1.1685057635550353 159.92330085825515 0.6618659956893992 0.10405710596672363 421.10479056496774 1.2145112009762422 0.037827269521445855 127758.47370647552 0.09999973335557649 1.0000011580235615 158.7547950947001 GLAAEDS(ph)GGDSKDLSEVSETTESTDVK ddPTM_KYSE-520_SHP099_60min_R1 3 GLAAEDSGGDSKDLSEVSETTESTDVK 27 1 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 GLAAEDS(0.973)GGDS(0.026)KDLSEVSETTESTDVK;GLAAEDS(0.999)GGDS(0.001)KDLSEVSETTESTDVK;GLAAEDS(1)GGDSKDLSEVSETTESTDVK 320.23 7.778699999999999e-65 1272830000.0 1414720.0 1442120.0 1224710.0 1104780.0 1104540.0 1316780.0 1169450.0 1277980.0 1531210.0 1223230.0 True False 1336242.6614255977 1372838.3905337478 1303656.7662052843 1209777.9590357821 1191461.0140270793 1308561.4875852584 1287669.4187321342 1273546.9856627735 1253180.862662929 1212393.1338585387 1.1021529437179325 1.132337648733278 1.0752756096995466 0.9978429646706811 0.9827348743184967 1.0793210972918135 1.0620890062565949 1.0504406121219176 1.033642329097147 1.0 20.209426156172807 -4.996946026510391 4.947779939496058 1.033039060674432 1.1155672958240308 0.5910819653655224 0.029395863451981672 0.13310541562134123 9.461059614039172 0.008573410942488027 0.017272604833109523 1.0070568166385993e-05 4.996946026510391 0.08252823514959884 GLAEVQQDGEAEEGAT(ph)SDGEKKR ddPTM_KYSE-520_SHP099_60min_R1 1 GLAEVQQDGEAEEGATSDGEKKR 23 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.5)S(0.5)DGEKKR 191.22 1.0421e-14 1233300000.0 602700.0 652950.0 698030.0 404930.0 479050.0 400400.0 315290.0 410620.0 780060.0 452560.0 True False 569267.0295473373 621581.3019020681 743026.1306874885 443414.4254533558 516748.50957835186 397900.95507916174 347162.5901338701 409195.65505942865 638420.7677123613 448550.67048635276 1.269125356406434 1.385754927594027 1.6565043362477712 0.9885492423243336 1.1520404350706996 0.887081396284008 0.773965157063415 0.9122618290052885 1.4232968752897792 1.0 18.774911442703402 -5.280169000664463 24.64234350050637 1.005705533355996 1.4319908721193237 0.5090483291912387 0.1875365593803804 533.1310732790836 701433.1626091818 0.05452614497636086 0.08104312502287174 5.246032772390709e-06 5.280169000664463 0.42628533876332764 GLAEVQQDGEAEEGATS(ph)DGEK ddPTM_KYSE-520_SHP099_60min_R1 3 GLAEVQQDGEAEEGATSDGEK 21 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.009)S(0.991)DGEK;GLAEVQQDGEAEEGAT(0.167)S(0.833)DGEK;GLAEVQQDGEAEEGAT(0.004)S(0.996)DGEK 209.01 5.052e-19 1019650000.0 2613350.0 2547130.0 2257690.0 2262370.0 2334230.0 2312010.0 2168140.0 2329350.0 2974800.0 2464320.0 True False 2468382.2659159354 2424762.051479926 2403224.3098317184 2477384.964593656 2517920.621048061 2297579.887993437 2387316.750207265 2321270.028524375 2434651.308605406 2442488.042011946 1.0106015765312242 0.9927426500244322 0.9839246982974439 1.0142874486922624 1.0308834998324001 0.940671908510494 0.9774118477324315 0.9503710923441328 0.9967914956913834 1.0 21.2199200683562 -6.257851472599567 24.998231410054323 0.9702201237163992 1.0049041333194595 0.3897157542626374 0.02072475634316428 330.6861849678949 2304018.422672861 0.006901654827609381 0.006629327100247154 5.522662803863927e-07 6.257851472599567 0.034684009603060284 GLAEVQQDGEAEEGATS(ph)DGEKKR ddPTM_KYSE-520_SHP099_60min_R1 7 GLAEVQQDGEAEEGATSDGEKKR 23 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 GLAEVQQDGEAEEGAT(0.258)S(0.742)DGEKKR;GLAEVQQDGEAEEGAT(0.031)S(0.969)DGEKKR;GLAEVQQDGEAEEGAT(0.227)S(0.773)DGEKKR;GLAEVQQDGEAEEGAT(0.147)S(0.853)DGEKKR;GLAEVQQDGEAEEGAT(0.389)S(0.611)DGEKKR;GLAEVQQDGEAEEGAT(0.082)S(0.918)DGEKKR;GLAEVQQDGEAEEGAT(0.148)S(0.852)DGEKKR 204.53 5.4469e-16 6571290000.0 3306820.0 3869480.0 3862860.0 2375920.0 2804650.0 2509990.0 2020896.0 2080430.0 4594780.0 2443000.0 True False 3123384.1026177625 3683584.372592104 4111866.136394532 2601726.722453607 3025359.9987244005 2494324.2213764815 2225187.889724307 2073213.4739060132 3760483.7769779256 2421356.92062524 1.289931309181484 1.5212892990765414 1.6981660577874536 1.0744912079222884 1.2494481804620508 1.0301348802110513 0.9189838436333135 0.8562196908048857 1.5530481049472449 1.0 21.207384325101607 -5.277714013924126 24.650072562433458 1.087573483379121 1.5049449221931688 0.4510109508931178 0.2048875231620951 575.2509016638535 871291.8731938223 0.05779781945019782 0.08603104160951043 5.275771604591463e-06 5.277714013924126 0.4173714388140477 GLAGPPAS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 12 GLAGPPASPGK 11 0 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK;GLAGPPAS(1)PGK 154.67 3.8561e-05 15320230000.0 22316220.0 25093100.0 17360320.0 14885140.0 15929800.0 21906000.0 16164490.0 21354600.0 26332720.0 21314280.0 True False 21078294.790318325 23887589.81048902 18479394.004694123 16299819.230219461 17183384.63183638 21769276.528381865 17798554.399419703 21280525.876801092 21551361.84185143 21125452.06145893 0.9977677509099728 1.1307492848434382 0.8747454942470911 0.7715725648284087 0.8133972509485646 1.0304762456703838 0.8425170901734791 1.0073406152394284 1.0201609782907095 1.0 24.332478878025146 -9.093935758020898 11.080153451917205 0.9999999996054605 0.9393229521001509 0.02311207054142206 0.10819844956742182 0.0 0.0 0.11269840599880286 0.027333378339518075 8.054975837026576e-10 9.093935758020898 -0.060677047505309556 GLAPDLPEDLYHLIK ddPTM_KYSE-520_SHP099_60min_R1 2 GLAPDLPEDLYHLIK 15 0 P62277;J3KMX5 P62277 RPS13 40S ribosomal protein S13 0 ; 170.56 5.2335000000000005e-08 821040000.0 886920.0 825680.0 642150.0 612390.0 938700.0 845120.0 611750.0 572320.0 672270.0 498400.0 False True 837720.7795688144 786013.0934290529 683544.0164763283 670591.3614782329 1012570.3495276036 839845.2925986535 673591.6601046502 570334.7555004925 550202.7145475846 493984.5637493323 1.6958440425962538 1.5911693423438786 1.3837355792825665 1.3575148105609998 2.049801600767069 1.7001448106480204 1.3635884793486337 1.154559873635856 1.113805480826279 1.0 18.91410643497099 -7.078512274511851 2.5864319883335383 1.0906480008351958 1.6215799227103702 0.6339569887636963 0.18401987680002208 0.2152448941562761 2.8029740007894377 0.11235040845575661 0.058841006806430084 8.346179590464472e-08 7.078512274511851 0.5309319218751745 GLAPNT(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 6 GLAPNTPGK 9 0 O43663-2;O43663-4;O43663-3;O43663;H0YL53;G3V3N7 O43663-2 PRC1 Protein regulator of cytokinesis 1 1 GLAPNT(1)PGK;GLAPNT(1)PGK;GLAPNT(1)PGK;GLAPNT(1)PGK;GLAPNT(1)PGK;GLAPNT(1)PGK 124.46 0.0032274 10497370000.0 21826500.0 31313600.0 23550100.0 19308700.0 21048900.0 24417200.0 20372200.0 25631800.0 28378400.0 30376500.0 True False 20615740.534950957 29809247.653328124 25068177.127492256 21143793.042627644 22705328.678141654 24264803.19769953 22431620.789511986 25542889.268307123 23225597.921247657 30107387.842559393 0.6847402585291318 0.9900974408410874 0.8326254425850994 0.7022792263877196 0.7541447566582216 0.8059418281183176 0.7450537026597489 0.848392740076907 0.7714252077497161 1.0 24.84361420754271 -10.382514042086989 3.1410567939578167 1.0023374066737898 0.7965481451020923 0.3616514863089161 0.08246667470727662 28855438.657647323 36538311.115008794 609308.0198238402 0.020314133276504755 4.1446318294167815e-11 10.382514042086989 -0.20578926157169752 GLATRLS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 GLATRLSR 8 1 G3V160;Q969H4-2;Q969H4 G3V160 CNKSR1 Connector enhancer of kinase suppressor of ras 1 1 GLATRLS(1)R;GLATRLS(1)R;GLATRLS(1)R 105.98 0.0011145 486350000.0 505600.0 440100.0 432910.0 341625.0 387690.0 353287.0 346356.0 368500.0 450950.0 403940.0 True False 477553.3601113878 418956.93539643276 460816.0712804903 374092.93728669855 418198.9973456443 351082.004787841 381369.0445888122 367221.75950854627 369068.8475244069 400361.405860565 1.1928056828677103 1.0464468584225726 1.1510002326272677 0.9343881098693737 1.0445537237704965 0.8769127084894723 0.952561957786792 0.9172256719381179 0.9218392235662783 1.0 18.610943382034318 -5.191734669941362 0.9311636465129419 0.9321335664824176 1.1648418100383742 0.6447376944072898 0.05919764834983063 0.44087919785224694 0.6747153164751766 0.022283129492916533 0.07797887809950758 6.430804841559914e-06 5.191734669941362 0.23270824355595654 GLDDDRGPWR ddPTM_KYSE-520_SHP099_60min_R1 8 GLDDDRGPWR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;;;;;;; 120.09 0.0005725 10127660000.0 11741150.0 10708980.0 7944360.0 7434860.0 10833150.0 11119340.0 8682870.0 9561170.0 9278330.0 9989150.0 False True 11089845.004097749 10194504.526293313 8456466.15702543 8141466.859027831 11685657.272808088 11049940.074550264 9560619.236244965 9528004.53286386 7593619.159665458 9900653.902441103 1.1201123797856867 1.029679920816115 0.8541320846434604 0.8223160752059491 1.1802914623575393 1.1160818450411434 0.9656553325116941 0.9623611356129352 0.7669815786402934 1.0 23.239092382461354 -7.534436710889065 24.28013189079311 0.8772175542117704 1.0069759101536107 0.15533956123782156 0.11901810686342251 317.4709477327806 666898.3067224598 0.08482403003601094 0.032123017182181905 2.9212134334270227e-08 7.534436710889065 0.12975835594184026 GLDFSDR ddPTM_KYSE-520_SHP099_60min_R1 1 GLDFSDR 7 0 Q13561;Q13561-3;Q13561-2;F8VW18;F8W1I6;H0YHL1;F8VX93;F8VRV7 Q13561 DCTN2 Dynactin subunit 2 0 164.24 0.028382 0.0 357270.0 396180.0 313710.0 292110.0 358350.0 378460.0 305930.0 346840.0 366510.0 352760.0 False True 337451.52089991176 377146.9181216963 333932.2485537474 319872.0465739262 386550.1062674087 376097.8907573914 336856.38998907286 345636.89299306495 299961.0229652299 349634.82084312703 0.9651542145778391 1.0786880929428744 0.9550886486319823 0.9148746849715101 1.105582405480273 1.075687741428185 0.9634520645762924 0.9885654185117453 0.8579266282514103 1.0 18.41548934736477 -7.2969132528965845 2.3551093694367617 0.9332770213335561 1.0139285197900532 0.16461503269388778 0.06734770854083133 0.5447929195262182 5.756659789785376 0.04737788430834761 0.01955371728746482 5.047621099846875e-08 7.2969132528965845 0.0806514984564971 GLDIESYDS(ph)LERPLR ddPTM_KYSE-520_SHP099_60min_R1 4 GLDIESYDSLERPLR 15 1 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 GLDIESYDS(1)LERPLR;GLDIESYDS(1)LERPLR;GLDIESYDS(1)LERPLR;GLDIESYDS(1)LERPLR 205.18 4.4604e-12 531460000.0 521238.0 485514.0 473198.0 480579.0 488069.0 489813.0 498054.0 522485.0 554270.0 487354.0 True False 492323.88907780737 462189.1786686281 503701.1002235692 526253.0836686544 526477.2535672615 486755.8953800929 548402.1588586202 520672.6214839158 453628.5400096535 483036.42271567514 1.0192272589092086 0.9568412586159819 1.042780785332326 1.0894687417358948 1.0899328266124488 1.0077001908955572 1.1353225824575566 1.0779158609958364 0.9391187054990846 1.0 18.881772452090235 -4.895359663389528 6.448471489109532 1.0561462385464264 0.9887676047077311 0.14969043523599368 0.0549151202522855 0.3246547431361534 17.455330360184007 0.01422161400767208 0.03015981474673966 1.2724488589506144e-05 4.895359663389528 -0.06737863383869536 GLDIESYDS(ph)LERPLRK ddPTM_KYSE-520_SHP099_60min_R1 4 GLDIESYDSLERPLRK 16 2 Q9H792 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 GLDIESYDS(1)LERPLRK;GLDIESYDS(1)LERPLRK;GLDIESYDS(1)LERPLRK;GLDIESYDS(1)LERPLRK 242.18 2.3918000000000005e-23 5587700000.0 5041760.0 5011910.0 4733810.0 4682110.0 4384440.0 4238130.0 3864880.0 4061510.0 5341370.0 4172970.0 True False 4762083.522300613 4771130.320569718 5038958.966963796 5127096.326672304 4729470.483948869 4211678.258615497 4255579.787993883 4047421.569773556 4371511.85298025 4136000.7323215283 1.1513739553009377 1.1535612852495056 1.2183167492176528 1.239626551950458 1.1434887926855437 1.0182972710093043 1.0289117588248673 0.9785833784177662 1.056941750231879 1.0 21.97980501042106 -6.175426307610533 3.3875826570875804 1.0147511259894233 1.1902633846056734 0.8753957901261227 0.031415761773674326 0.08624939558609654 1.9004437520811799 0.011553484840538506 0.011402396016197174 6.676881866855849e-07 6.175426307610533 0.17551225861625008 GLDVDSLVIEHIQVNK ddPTM_KYSE-520_SHP099_60min_R1 3 GLDVDSLVIEHIQVNK 16 0 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A0A0MRF8;A0A0A6YYL6;P18621-2;P18621;P18621-3;J3KRB3;A0A087WWH0;J3QS96 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 0 ;; 232.8 1.0682e-22 1154542000.0 436663.0 330842.0 255506.0 402098.0 339854.0 339783.0 320746.0 354234.0 297608.0 241284.0 False True 412440.4329238902 314947.85371603374 271976.3255840545 440313.2730248285 366598.57629525306 337662.28826089605 353170.13585929916 353005.24493283697 243569.88928715765 239146.41147611145 1.72463567560197 1.3169666723077473 1.1372795598533265 1.8411870381287816 1.5329461731516425 1.4119479618226487 1.476794628359195 1.4761051305513693 1.0184969441261638 1.0 17.867534617488143 -7.764049104295841 6.761670227701605 1.0031417374138891 1.4830782767364228 0.519579650365348 0.18476617824547134 0.10896195372144521 24.555696743823987 0.15402663916184703 0.04754360173404329 1.7216738997883136e-08 7.764049104295841 0.47993653932253366 GLECSDWKPEAGLS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 4 GLECSDWKPEAGLSPPR 17 1 S4R419;S4R3M9;O75764-2;O75764 S4R419 TCEA3 Transcription elongation factor A protein 3 1 GLECSDWKPEAGLS(1)PPR;GLECSDWKPEAGLS(1)PPR;GLECSDWKPEAGLS(1)PPR;GLECSDWKPEAGLS(1)PPR 154.42 1.8019999999999999e-06 5570950000.0 4671910.0 4035850.0 3710330.0 3391070.0 3632160.0 3872800.0 3458880.0 4023150.0 5027360.0 3823300.0 True False 4412749.839078314 3841961.708065643 3949503.808537899 3713356.2732376317 3917990.3278365615 3848628.4186577797 3808537.3458157317 4009194.631660265 4114518.1534323217 3789428.5364823937 1.1644895256883587 1.0138630854434885 1.042242588958835 0.9799251358054696 1.0339264324729838 1.0156223772543655 1.0050426625411641 1.05799452161773 1.0857885598897448 1.0 21.853548868975146 -4.258317038241076 24.85372760772557 1.0261865549583202 1.164489581121177 0.6720368880109546 0.029014198375084586 168.8594837622933 1344046.559758876 0.007365139789816205 0.05111114378019884 5.516745656624264e-05 4.258317038241076 0.13830302616285683 GLEFPMTDLDMLS(ph)PIHT(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 3 GLEFPMTDLDMLSPIHTPQR 20 0 O60784-4;O60784;O60784-2;V9GYF4;B0QY02;B0QY01 O60784-4 TOM1 Target of Myb protein 1 2 GLEFPMTDLDMLS(1)PIHT(1)PQR;GLEFPMTDLDMLS(1)PIHT(1)PQR;GLEFPMTDLDMLS(1)PIHT(1)PQR 93.397 0.0017609000000000001 70016000.0 90258.0 91385.0 83760.0 86586.0 85808.0 98436.0 86304.0 99404.0 114605.0 104146.0 True False 85251.20881513775 86994.72742831857 89159.30362073856 94815.10740696984 92560.60141926548 97821.62441101971 95028.4505658712 99059.19072506804 93795.62095694584 103223.34746436196 0.8258907593029851 0.8427814982298811 0.863751329625509 0.9185432340266326 0.896702186985577 0.9476695613343948 0.9206100451129038 0.9596587706019551 0.9086667237693387 1.0 16.65540979656869 -1.0000000000000056 0.18233361990658967 0.9911993736249127 0.2333694523567707 0.8338546266378379 0.020806473997341698 20.486015543348344 0.23261169337534207 0.04415722114088767 4.318839011888307 0.09999999999999871 1.0000000000000056 -0.7578299212681421 GLEFPMTDLDMLS(ph)PIHTPQR ddPTM_KYSE-520_SHP099_60min_R1 3 GLEFPMTDLDMLSPIHTPQR 20 0 O60784-4;O60784;O60784-2;V9GYF4;B0QY02;B0QY01 O60784-4 TOM1 Target of Myb protein 1 1 GLEFPMTDLDMLS(1)PIHTPQR;GLEFPMTDLDMLS(1)PIHTPQR;GLEFPMTDLDMLS(1)PIHTPQR 306.19 1.5137e-53 424560000.0 308214.0 369430.0 275039.0 282460.0 313432.0 558490.0 478050.0 675100.0 711680.0 623140.0 True False 291116.7550106237 351682.0282742651 292768.4540179595 309304.91347530426 338097.3152158688 555004.2567486537 526375.959318394 672758.2356695252 582456.851992838 617619.4643955842 0.4713529475556877 0.5694153901357834 0.47402724637972515 0.500801757888244 0.5474201101267723 0.8986184677514867 0.8522658200766339 1.0892762849174467 0.9430675125545839 1.0 19.2363586945695 -6.336577157408731 1.9080536815363591 0.9859955306821699 0.49992129178942535 0.9304807510363682 0.06096420657992661 0.07993870213412715 0.5733701297753816 0.02493884496601548 0.021668505921568288 4.607049118937703e-07 6.336577157408731 -0.4860742388927446 GLEGERPAR ddPTM_KYSE-520_SHP099_60min_R1 2 GLEGERPAR 9 1 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;A0A2R8Y6L3;S4R435 P46783 RPS10;RPS10-NUDT3 40S ribosomal protein S10 0 ; 107.69 0.0013770999999999998 1931100000.0 1453820.0 1342630.0 1016180.0 1039380.0 1363610.0 1378660.0 1078350.0 1256780.0 1258570.0 1136140.0 False True 1373173.7064816807 1278128.039471284 1081684.5887454874 1138162.3626990088 1470918.3491204183 1370055.2715520398 1187360.1416818143 1252420.5235146573 1030045.4139678311 1126074.6835035456 1.219433956377865 1.1350295483907482 0.9605797950985385 1.0107343494819143 1.3062351642112793 1.216664659655965 1.0544239730064722 1.1122002313541168 0.9147221130689667 1.0 20.10287108230819 -7.727619030302524 9.217368981412319 0.9575091562105534 1.1244883635920202 0.3166870484092299 0.0995754085816796 0.34984552366405536 90.9194468142723 0.07469276015638604 0.027544629549429493 1.8723238510346822e-08 7.727619030302524 0.16697920738146677 GLEGKS(ph)PDTGPDWLK ddPTM_KYSE-520_SHP099_60min_R1 1 GLEGKSPDTGPDWLK 15 1 O14686-3;O14686 O14686-3 KMT2D Histone-lysine N-methyltransferase 2D 1 GLEGKS(0.999)PDT(0.001)GPDWLK 68.12899999999999 0.015790000000000002 411660000.0 445610.0 416290.0 412250.0 409200.0 395940.0 389530.0 354080.0 421450.0 535860.0 397680.0 True False 420891.1249984879 396290.803535971 438824.2946233219 448090.2449695342 427098.2254095658 387098.7987811831 389873.8618877883 419988.0883171691 438561.33193132014 394156.8645903581 1.0678264488325335 1.0054139332263834 1.113323993683038 1.1368322747219648 1.08357424106629 0.9820932566618867 0.9891337609785863 1.0655353897074888 1.1126568412987325 1.0 18.588410375002233 -6.199500075011982 24.948752185527496 1.0314328605873473 1.0820268819293841 0.22326265570153891 0.04798821220718132 402.54264602594816 162141.07593189648 0.0173443112006062 0.017344310561555054 6.31684070182104e-07 6.199500075011982 0.05059402134203683 GLEMLVLT(ph)AT(ph)PVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 GLEMLVLTATPVTPK 15 0 Q8TF61 Q8TF61 FBXO41 F-box only protein 41 3 GLEMLVLT(1)AT(1)PVT(1)PK 44.611999999999995 0.062463 0.0 102010.0 114580.0 92375.0 92190.0 92793.0 100980.0 76655.0 106440.0 130620.0 102460.0 True False 96351.30194810661 109075.40481191376 98329.6403052258 100951.70988206573 100095.28118005216 100349.74636337088 84404.0354807061 106070.78448328281 106902.70066224222 101552.28411267379 0.9487851779011035 1.074081255433831 0.9682661612625825 0.9940860588626277 0.9856526818145709 0.988158437204931 0.831138720494544 1.0444943253624475 1.0526863240577835 1.0 16.63186316351419 GLFDEYGSK ddPTM_KYSE-520_SHP099_60min_R1 1 GLFDEYGSK 9 0 P14625;Q58FF3 P14625 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein 0 155.07 0.0015458 616370000.0 590800.0 659360.0 433720.0 345320.0 572630.0 654030.0 409650.0 513260.0 516170.0 540930.0 False True 558027.1462693989 627683.3558804619 461678.28517653607 378139.1089757565 617692.7231809859 649947.956169889 451061.4197987252 511479.6208557844 422446.5395868131 536137.7810371724 1.0408278729954097 1.170750090893039 0.8611187301208422 0.7053021114166523 1.1521156408452382 1.2122778493851856 0.8413162357745713 0.9540077922997962 0.7879439847898413 1.0 19.03224427824548 GLFIIDDK ddPTM_KYSE-520_SHP099_60min_R1 7 GLFIIDDK 8 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5;H7C3T4;Q13162 Q06830 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 0 ;;;;;; 197.6 2.5561999999999997e-05 22426490000.0 10585090.0 12821020.0 9484480.0 6747338.0 10327520.0 12089510.0 8972624.0 9746296.0 9833860.0 10479030.0 False True 9997913.95684622 12205078.954456644 10095864.756504549 7388602.974858858 11140237.068449257 12014054.883713964 9879664.3982915 9712488.373978587 8048278.915437119 10386193.946761964 0.9626157578121488 1.1751252688923397 0.9720466234555605 0.7113869635721904 1.072600523883186 1.1567331541560042 0.9512304939550661 0.9351345087298881 0.7749016585566726 1.0 23.30816373519078 -7.259312847900467 3.1052292175132616 0.8846416710934834 1.0055569931171202 0.10781692559907119 0.13187594418200796 0.5878952189531168 11.573781311156775 0.08300289657315754 0.03869605241104883 5.504110600499241e-08 7.259312847900467 0.12091532202363686 GLFIIDDKGILR ddPTM_KYSE-520_SHP099_60min_R1 1 GLFIIDDKGILR 12 1 Q06830;A0A0A0MSI0;A0A0A0MRQ5;H7C3T4;Q13162 Q06830 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 0 87.001 0.015855 0.0 116690.0 111160.0 77132.0 49561.0 83117.0 59396.0 36955.0 47092.0 75351.0 44367.0 False True 110216.9730842522 105819.70674543835 82104.05213556357 54271.262538942 89657.83502896118 59025.287532172464 40690.772046043865 46928.64884335542 61669.15784413267 43973.94289700371 2.506415522992871 2.4064184326907077 1.8671068984618608 1.234168668160069 2.038885510879905 1.3422787142472574 0.9253382654666713 1.0671921995549103 1.4024022814732557 1.0 15.42436127627838 -3.800231578197449 0.37457808063849785 1.0324971402220022 4.4503216599259305 0.7623836887105697 0.2700811352636066 4.179426683463743 0.3580168021080179 0.2419227317269187 6.888123594925453 0.00015840483075114117 3.800231578197449 3.4178245197039283 up GLFQDEDS(ph)CS(ph)DCSYR ddPTM_KYSE-520_SHP099_60min_R1 1 GLFQDEDSCSDCSYR 15 0 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 2 GLFQDEDS(0.999)CS(0.999)DCS(0.001)Y(0.001)R 103.39 0.012553 0.0 166360.0 186250.0 162280.0 143460.0 178580.0 175200.0 159120.0 157600.0 204790.0 161480.0 True False 157131.67916956174 177302.27043305067 172740.82845718047 157094.39526717836 192633.23001879125 174106.51181285968 175205.40246154796 157053.3223841165 167605.2983357877 160049.41282953884 0.9817697946628231 1.1077970690332182 1.079296858409338 0.9815368422156742 1.2035859839358232 1.0878297441696485 1.0946956903125353 0.9812802159504744 1.047209704632258 1.0 17.288157858540135 -7.254042883771552 24.735562591587293 1.0106837199373664 1.0795993260634573 0.19852071384680292 0.06161433351105868 770.1784460506773 2575663.8187531265 0.02943426351146019 0.01654807412989077 5.57130733158754e-08 7.254042883771552 0.06891560612609093 GLFQDEDS(ph)CSDCSYR ddPTM_KYSE-520_SHP099_60min_R1 5 GLFQDEDSCSDCSYR 15 0 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 1 GLFQDEDS(0.507)CS(0.473)DCS(0.02)YR;GLFQDEDS(0.987)CS(0.013)DCSYR;GLFQDEDS(0.989)CS(0.011)DCSYR;GLFQDEDS(0.983)CS(0.017)DCSYR;GLFQDEDS(0.998)CS(0.002)DCSYR 278.34 9.6824e-24 1322840000.0 1903270.0 1816720.0 1740750.0 1647920.0 1717260.0 1651580.0 1608520.0 1692520.0 1986980.0 1815830.0 True False 1797691.81902532 1729442.0442476848 1852961.5302984766 1804537.8213347862 1852398.592127169 1641271.8765975067 1771124.8992423876 1686649.043157136 1626194.5196896498 1799743.1588943608 0.9988602041025115 0.9609382514948054 1.0295699812171029 1.0026640814922563 1.0292571931570258 0.9119478346042399 0.9840986979111207 0.9371609692314641 0.9035703298289922 1.0 20.779359603752322 -6.256760562539751 24.99674775200611 0.9457245725725033 1.0031689692756331 0.43265505838912144 0.03254142558058047 385.1242438158223 2057542.2283995203 0.010700721392018062 0.010377485959179141 5.536552691482349e-07 6.256760562539751 0.05744439670312984 GLFS(ph)DEEDSEDLFSSQSASK ddPTM_KYSE-520_SHP099_60min_R1 6 GLFSDEEDSEDLFSSQSASK 20 0 Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 Q641Q2 FAM21A WASH complex subunit FAM21A 1 GLFS(0.668)DEEDS(0.332)EDLFSSQSASK;GLFS(0.958)DEEDS(0.042)EDLFSSQSASK;GLFS(0.996)DEEDS(0.004)EDLFSSQSASK;GLFS(0.998)DEEDS(0.002)EDLFSSQSASK;GLFS(0.999)DEEDS(0.001)EDLFSSQSASK;GLFS(0.971)DEEDS(0.029)EDLFSSQSASK 248.54 9.8227e-27 474927000.0 474458.0 488757.0 427940.0 435959.0 416822.0 463053.0 434981.0 473752.0 570182.0 474862.0 True False 448138.86893142585 465276.3800807863 455525.697128209 477392.41228414694 449623.52000723814 460162.91446621116 478953.1244854606 472108.66488654853 466651.32191853126 470655.092117046 0.952159822420405 0.9885718605272795 0.9678546025694023 1.014314771644764 0.9553142578035094 0.9777072896340288 1.017630813959941 1.0030884033634146 0.9914931968960424 1.0 18.844310678280102 -6.73746474639575 23.529422676445662 1.003310460111798 0.9769919455026911 0.3645706395795685 0.01747391164436988 131.46048109085123 129018.78823284544 0.006508319934677355 0.005037471281004076 1.8303546782668833e-07 6.73746474639575 -0.026318514609106836 GLFS(ph)DEEDSEDLFSSQSASNLK ddPTM_KYSE-520_SHP099_60min_R1 4 GLFSDEEDSEDLFSSQSASNLK 22 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5 A0A0A0MR88 FAM21C WASH complex subunit FAM21C 1 GLFS(0.943)DEEDS(0.057)EDLFSSQSASNLK;GLFS(0.997)DEEDS(0.003)EDLFSSQSASNLK;GLFS(0.63)DEEDS(0.37)EDLFSSQSASNLK;GLFS(0.933)DEEDS(0.067)EDLFSSQSASNLK 256.67 4.0355e-29 404666000.0 398047.0 401527.0 356998.0 316447.0 369217.0 398318.0 373128.0 392690.0 517172.0 427615.0 True False 375966.539422978 382237.04021568596 380010.6622969957 346522.0277367404 398272.2773426368 395831.94961343973 410847.419618353 391327.85004453483 423266.6016451774 423826.6637794361 0.8870761836226402 0.9018711489435837 0.8966181101214464 0.8176031792022272 0.9397055715916494 0.9339477277895732 0.9693760556607226 0.9233205069140861 0.9986785585190314 1.0 18.693114827820086 -5.953477060768327 11.18100946775907 0.9579169593603024 0.8790139846456573 0.6375553906953766 0.031629155936280025 0.4295192803967273 101.53491178000534 0.009665885265400893 0.010958637263260226 1.1130711831491118e-06 5.953477060768327 -0.07890297471464514 GLFSDEEDS(ph)EDLFSSQSASNLK ddPTM_KYSE-520_SHP099_60min_R1 1 GLFSDEEDSEDLFSSQSASNLK 22 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5 A0A0A0MR88 FAM21C WASH complex subunit FAM21C 1 GLFS(0.408)DEEDS(0.592)EDLFSSQSASNLK 96.505 0.00020109 32139000.0 60671.0 68818.0 56937.0 47621.0 59935.0 63290.0 53595.0 66678.0 82136.0 62797.0 True False 57305.45868536003 65511.879982076134 60607.250122420985 52146.88552222431 64651.54351649824 62894.9836337665 59012.90563679398 66446.70958076214 67222.17288006362 62240.66743532669 0.9207076505872183 1.0525574785994785 0.9737564299964655 0.8378265798066726 1.0387347401709124 1.0105126796578732 0.9481406300488884 1.0675770732986736 1.0800361829331784 1.0 15.92556991063951 -7.266121692097183 24.89011530341318 1.0553549768380832 0.9715421716411908 0.263342881312875 0.06118519563148683 526.6045066624937 2799279.2990334723 0.03250022904166773 0.016453554590110196 5.4184903955428274e-08 7.266121692097183 -0.08381280519689238 GLGACTLLGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 GLGACTLLGSPR 12 0 K7ER53;O95644-8;O95644-11;O95644-3;O95644-10;O95644-2;O95644-5;O95644-4;O95644-6;O95644 K7ER53 NFATC1 Nuclear factor of activated T-cells, cytoplasmic 1 1 GLGACTLLGS(1)PR;GLGACTLLGS(1)PR;GLGACTLLGS(1)PR;GLGACTLLGS(1)PR 153.75 1.2464000000000001e-05 2478590000.0 1419960.0 1439080.0 1268660.0 1228571.0 1315450.0 1430130.0 1192660.0 1492700.0 1551430.0 1384600.0 True False 1341191.9881799174 1369944.436696882 1350439.8535277715 1345334.0184566614 1418968.4311133341 1421204.028190211 1313225.712039904 1487522.1720987975 1269729.4203676498 1372333.5212025007 0.9773076059562433 0.9982591079583005 0.9840463944540647 0.9803258447537002 1.0339821983434245 1.0356112462697025 0.9569289766304012 1.0839363384458927 0.9252338449439429 1.0 20.388199714763704 -5.720564548388008 24.998162836651144 1.0091777832074522 0.9858658640784268 0.054909235847865334 0.04126066463169303 433.0517875578389 264843.5322038887 0.011351697483363041 0.01465475207932672 1.9029853793486858e-06 5.720564548388008 -0.023311919129025416 GLGHPPS(ph)SPLLKK ddPTM_KYSE-520_SHP099_60min_R1 1 GLGHPPSSPLLKK 13 1 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785 M0QXA7 WIZ Protein Wiz 1 GLGHPPS(0.569)S(0.431)PLLKK 126.48 4.065e-05 1062200000.0 556300.0 536860.0 514220.0 519610.0 524750.0 645410.0 598300.0 629980.0 796170.0 733530.0 True False 525440.9300434436 511068.4397567111 547367.44398109 568993.5781735564 566044.8395809196 641381.7567873162 658782.0028452993 627794.7464184378 651605.5978124128 727031.4948777044 0.7227210014221311 0.7029522700975686 0.7528799616489295 0.7826257626834557 0.7785699018116612 0.8821925340321115 0.906125810899175 0.8635041959551429 0.8962549798781699 1.0 19.47165833723325 -5.693210499853155 0.2353473850116361 1.0141964771814052 0.5721723212069951 0.9182252358558064 0.025800668772353118 1.4939212792469867 0.13700805119454665 0.05433492504615675 0.19785374759548469 2.0267001523715465e-06 5.693210499853155 -0.44202415597441 GLGHPPSS(ph)PLLK ddPTM_KYSE-520_SHP099_60min_R1 4 GLGHPPSSPLLK 12 0 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785 M0QXA7 WIZ Protein Wiz 1 GLGHPPS(0.164)S(0.836)PLLK;GLGHPPS(0.026)S(0.974)PLLK;GLGHPPS(0.15)S(0.85)PLLK;GLGHPPS(0.014)S(0.986)PLLK 119.17 8.7844e-05 4028520000.0 3051360.0 2960980.0 2596000.0 2394060.0 2587660.0 3538610.0 3220310.0 4032660.0 4349340.0 4118580.0 True False 2882094.978064643 2818730.0762784095 2763342.3137468575 2621590.742599617 2791294.1202286137 3516524.2224092637 3545850.3619969035 4018671.6436899235 3559609.493939033 4082092.585406757 0.7060337113293228 0.6905110595372592 0.6769425866590202 0.6422173646848803 0.6837900076562025 0.8614513632004901 0.8686354578710713 0.9844636199718841 0.8720060653852951 1.0 21.96087747364297 -6.434548325442253 1.9249802289225038 0.9356438297178511 0.6746939715920794 0.8942428898909249 0.041396727603372666 0.10034027652183525 0.7384163696043975 0.01757848188999677 0.014260845705696627 3.676644798094435e-07 6.434548325442253 -0.26094985812577165 GLGHPPSS(ph)PLLKK ddPTM_KYSE-520_SHP099_60min_R1 1 GLGHPPSSPLLKK 13 1 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785 M0QXA7 WIZ Protein Wiz 1 GLGHPPS(0.203)S(0.797)PLLKK 107.69 0.00026588 938730000.0 808960.0 789960.0 726630.0 670870.0 780770.0 859350.0 811110.0 908510.0 1172400.0 884820.0 True False 764085.3761782208 752009.1358458664 773469.7324491064 734629.2830955798 842212.1570263845 853986.4778903021 893104.9144707514 905358.5908578286 959521.7137989025 876981.1831795429 0.871267697452741 0.8574974586335097 0.8819684473101804 0.8376796414629348 0.9603537375487334 0.9737797050492324 1.0183854928708402 1.032358057644295 1.0941189300323462 1.0 19.742186362460533 -6.228970510247765 1.1828270606897706 1.0443370436194777 0.8600352878356936 0.8717888409266785 0.0293803650742705 0.14797710908973133 0.4273545411090291 0.01434842187372986 0.01331409402989595 5.902411577580918e-07 6.228970510247765 -0.18430175578378405 GLGKPGGQGDAIQLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 GLGKPGGQGDAIQLSPK 17 1 Q5VV41 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 GLGKPGGQGDAIQLS(1)PK;GLGKPGGQGDAIQLS(1)PK 215.08 3.3805000000000002e-18 4922370000.0 10146300.0 8988200.0 7601200.0 7161600.0 7994000.0 7855400.0 7636000.0 8177900.0 10825100.0 7846200.0 True False 9583464.512852412 8556393.380436746 8091185.5143500045 7842236.310786446 8623082.320361834 7806371.534787322 8407921.40017835 8149532.773636205 8859534.718564052 7776688.7722512325 1.232332268078943 1.1002617734899787 1.0404409577532483 1.0084287208161267 1.108837266463678 1.0038168896049953 1.0811698457291337 1.047943798743156 1.1392425462848184 1.0 22.8907245717433 -4.300978093617718 2.7121837053483886 1.055247709013663 1.2582411771354802 0.6046633191046109 0.04344181556960157 0.25879748890589643 2.7172067644511673 0.010673431677613752 0.11295892697478511 5.000597580097462e-05 4.300978093617718 0.2029934681218173 GLGPPS(ph)PPAPPR ddPTM_KYSE-520_SHP099_60min_R1 10 GLGPPSPPAPPR 12 0 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR;GLGPPS(1)PPAPPR 164.68 3.0906e-06 33664140000.0 3159400.0 3896070.0 3088840.0 2480250.0 2999680.0 3612780.0 2607670.0 3247970.0 4097100.0 3677180.0 True False 2984141.7838922436 3708896.9490797007 3287951.5687187426 2715972.214285647 3235737.7501554927 3590231.299927302 2871278.7320066886 3236703.550151899 3353169.91948608 3644603.046002754 0.8187837595002626 1.017640852039418 0.9021425727898758 0.7452038479922828 0.8878162338431651 0.9850815725638257 0.7878165868175371 0.8880812284075157 0.9200370732180818 1.0 21.797330260488394 -8.096356345819508 2.6772971228227496 0.9997240326925041 0.8809543817998582 0.1828155790427275 0.07812690901982289 0.7330258085632767 11.504651080068422 0.07615722397796566 0.02053259946363929 8.010205430413601e-09 8.096356345819508 -0.1187696508926459 GLGPS(ph)PAGDGPSGSGK ddPTM_KYSE-520_SHP099_60min_R1 2 GLGPSPAGDGPSGSGK 16 0 Q92934;F5GYS3;A8MXU7 Q92934 BAD Bcl2-associated agonist of cell death 1 GLGPS(1)PAGDGPSGSGK;GLGPS(1)PAGDGPSGSGK 257.45 1.2773e-22 0.0 810650.0 930930.0 684140.0 507480.0 567340.0 891770.0 659040.0 839020.0 930870.0 925600.0 True False 765681.6285092885 886206.725445581 728240.7590627039 555710.7466205742 611986.4302769683 886204.1326447134 725662.194810574 836109.6354487392 761847.4733230841 917399.9041059032 0.8346214394425089 0.9659982756476053 0.793809499873936 0.6057453724743618 0.667087959719605 0.9659954493982718 0.7909987689804736 0.9113905851817268 0.8304420677540616 1.0 19.807191231054478 -8.107108594598968 0.6550462480414824 0.9962811889428239 0.7957339014803274 0.2228708967141616 0.1085991452671431 1.5395644197226193 1.4946064491972968 0.12251001314097744 0.0492156674858002 7.814323843141094e-09 8.107108594598968 -0.2005472874624965 GLGS(ph)SPDLELLLR ddPTM_KYSE-520_SHP099_60min_R1 9 GLGSSPDLELLLR 13 0 Q9NQQ7-2;Q9NQQ7;Q9NQQ7-3 Q9NQQ7-2 SLC35C2 Solute carrier family 35 member C2 1 GLGS(0.956)S(0.044)PDLELLLR;GLGS(0.5)S(0.5)PDLELLLR;GLGS(0.5)S(0.5)PDLELLLR;GLGS(0.913)S(0.087)PDLELLLR;GLGS(0.804)S(0.196)PDLELLLR;GLGS(0.758)S(0.242)PDLELLLR;GLGS(0.906)S(0.094)PDLELLLR;GLGS(0.5)S(0.5)PDLELLLR;GLGS(0.5)S(0.5)PDLELLLR 192.18 2.1723e-08 4057305000.0 3307450.0 3497630.0 3176800.0 3013560.0 3062400.0 3296040.0 2740530.0 3470150.0 4604440.0 2872280.0 True False 3123979.1552618826 3329598.604750341 3381581.611059719 3299967.8363401485 3303393.4573275093 3275468.1917560375 3017569.5173953334 3458112.8595891017 3768389.764486711 2846833.8338000295 1.0973521243745765 1.1695795396340025 1.187839476582971 1.1591712158118002 1.1603745248868467 1.1505652886610018 1.0599738845197724 1.214722411449326 1.323712581937585 1.0 21.440926856521383 GLGTDEDS(ph)LIEIICSR ddPTM_KYSE-520_SHP099_60min_R1 14 GLGTDEDSLIEIICSR 16 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YMM1;H0YNA0;H0YN52;H0YLE2 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR;GLGTDEDS(1)LIEIICSR 432.06 9.565899999999998e-118 15817705000.0 6169795.0 6304344.0 5403086.0 4008467.0 4570846.0 5941968.0 4393677.0 5328809.0 6627111.0 5765103.0 True False 5827544.17216859 6001473.851226735 5751377.568803261 4389430.498490454 4930545.5756438095 5904881.973650878 4837832.7493152665 5310324.605332365 5423794.698273248 5714028.672602262 1.0198661060471421 1.0503051691012193 1.0065363508552345 0.7681848919549498 0.86288429025302 1.0334008301294888 0.8466588157864525 0.9293486101661363 0.9492067696963731 1.0 22.446076844960956 -5.022842843490921 24.63525720221665 0.9083102390232937 1.0334194586445706 0.3419715754417635 0.07220675578985972 644.1392322434839 694684.2479388029 0.01966019834540978 0.03438686468694786 9.487617260233328e-06 5.022842843490921 0.12510921962127697 GLGTDEDSLIEIICSR ddPTM_KYSE-520_SHP099_60min_R1 8 GLGTDEDSLIEIICSR 16 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YMM1;H0YNA0;H0YN52;H0YLE2 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;;;;;; 333.03 1.3475e-57 1921438000.0 1477022.0 2089719.0 3037072.0 1194868.0 1924431.0 2084714.0 1467965.0 1523228.0 2540752.0 2015181.0 False True 1395088.6452896397 1989325.7625078305 3232846.520607012 1308427.895469835 2075872.7711854202 2071702.5266406077 1616361.2281577792 1517944.2775920872 2079415.4839457436 1997328.0641270962 0.6984774661439223 0.995993496630328 1.61858563881937 0.655089125802508 1.0393248903217362 1.0372369786663043 0.8092617618449109 0.7599874576715985 1.0410986163429905 1.0 20.929639886391136 GLGTDEDTLIEILASR ddPTM_KYSE-520_SHP099_60min_R1 2 GLGTDEDTLIEILASR 16 0 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ; 202.32 8.6886e-12 80768000.0 60129.0 109575.0 115018.0 108039.0 99813.0 73223.0 72649.0 88044.0 121327.0 70363.0 False True 56793.52450581018 104310.85252457195 122432.24431530674 118306.99407689033 107667.71524171597 72765.9880963072 79993.06990591368 87738.59591362413 99297.07520477606 69739.63856158557 0.8143650537514192 1.4957182841212646 1.755561784381625 1.6964096246701361 1.5438524985562827 1.0433949701653404 1.147024440559346 1.258087907010646 1.4238254922570177 1.0 16.089691266652892 -6.249982274666471 24.30810783785713 1.1888819219239029 1.492522874300298 0.22386391093851465 0.26303709326399466 808.6671893771066 1715718.9259539736 0.09141015964259797 0.09058372581883843 5.623642771074819e-07 6.249982274666471 0.3036409523763952 GLHVVEVTYDDVPIPNS(ph)PFK ddPTM_KYSE-520_SHP099_60min_R1 2 GLHVVEVTYDDVPIPNSPFK 20 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 1 GLHVVEVTYDDVPIPNS(1)PFK;GLHVVEVTYDDVPIPNS(1)PFK 161.91 5.875199999999999e-09 995720000.0 1388260.0 1450510.0 1306600.0 1248420.0 1223420.0 1233360.0 1112520.0 1339500.0 1621290.0 1331440.0 True False 1311250.4503723006 1380825.3223401017 1390825.526633915 1367069.4614488408 1319696.1936924038 1225662.1427483375 1224984.3787488772 1334853.5871416517 1326904.6053949352 1319644.4774446462 0.9936391753871469 1.046361611737978 1.0539395650918826 1.0359376974744199 1.0000391895306968 0.9287820800960758 0.9282684841912359 1.0115251569320067 1.0055015787012178 1.0 20.33171787791366 -5.938381106496701 4.258279238206661 0.9717935593251723 1.0345129534706696 0.4332476127692205 0.03082904612201162 0.2063164313365519 7.598542113803629 0.010701642084136612 0.012083051438057947 1.1524415118081453e-06 5.938381106496701 0.06271939414549732 GLIPS(ph)SPQK ddPTM_KYSE-520_SHP099_60min_R1 1 GLIPSSPQK 9 0 Q53GG5-3 Q53GG5-3 1 GLIPS(0.637)S(0.363)PQK 77.37899999999999 0.014334 170440000.0 448420.0 423010.0 351060.0 339680.0 389310.0 455400.0 330830.0 419630.0 513880.0 475620.0 True False 423545.24869689206 402687.9646490449 373689.8893158601 371963.0850714844 419946.4821291055 452557.67967794737 364273.52498965507 418174.4014723779 420572.34586061066 471406.3768267609 0.898471614974658 0.8542268082152618 0.7927128432825358 0.7890497527320863 0.8908375083000487 0.9600160327153565 0.7727377967216669 0.8870783723531482 0.8921651605386929 1.0 18.84661174883762 -9.316422256098969 0.408979807483632 1.0319767904929749 0.8445868233894164 0.3884150828871342 0.05481337958043331 7.343837780164606 1.3225627467108836 0.39748115874743506 0.03834110455956036 4.825893615893184e-10 9.316422256098969 -0.18738996710355849 GLIVYCVTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 GLIVYCVTSPK 11 0 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 GLIVYCVT(0.231)S(0.769)PK;GLIVY(0.001)CVT(0.205)S(0.794)PK;GLIVYCVTS(1)PK;GLIVYCVT(0.012)S(0.988)PK 279.86 1.8083e-21 4993000000.0 7630660.0 7981010.0 6687310.0 5508640.0 6007710.0 7154030.0 5933130.0 6535750.0 8936290.0 6903220.0 True False 7207372.078456408 7597590.299859751 7118384.702674318 6032179.489366986 6480482.597805986 7109379.04511732 6532908.682168703 6513079.008705519 7313685.001538714 6842062.841423896 1.0533916810615682 1.1104239285645938 1.04038575319383 0.8816316992656609 0.9471533290473751 1.0390695335440374 0.9548156504229277 0.9519174494091738 1.0689298200039141 1.0 22.70599992402839 -5.0090338336857 23.87556568818961 0.9748279131099855 1.0802821074433966 0.4160728612281587 0.0506203614465842 215.1857243324332 568725.1095101157 0.013524603436702504 0.025961826124220617 9.79413681272102e-06 5.0090338336857 0.10545419433341108 GLLAQGLRPES(ph)PPPAGPLLNGAPAGES(ph)PQPK ddPTM_KYSE-520_SHP099_60min_R1 14 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK 31 1 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 2 GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGES(1)PQPK 269.25 1.2314999999999998e-41 118718370000.0 14278960.0 13373290.0 12863210.0 12415220.0 13429090.0 13135640.0 12151110.0 12635850.0 15727010.0 13424080.0 True False 13486877.624398934 12730817.07468246 13692393.098463709 13595158.776027994 14485882.981929949 13053655.59834173 13379462.78220548 12592019.185579555 12871381.429659242 13305153.094976205 1.013658206570456 0.9568335654468639 1.0291045131704435 1.0217964933572459 1.088742299958921 0.9810977374826723 1.00558503060422 0.9464016757788442 0.9673982206577729 1.0 23.6654817749544 -6.863225192566216 2.1977757108649323 0.9695379767909713 1.0181533516568029 0.24126518785189222 0.03435986064496442 0.4455544414007604 4.369519098557372 0.018528224397055225 0.011141965907174565 1.3701711138953846e-07 6.863225192566216 0.04861537486583156 GLLAQGLRPES(ph)PPPAGPLLNGAPAGESPQPK ddPTM_KYSE-520_SHP099_60min_R1 9 GLLAQGLRPESPPPAGPLLNGAPAGESPQPK 31 1 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK;GLLAQGLRPES(1)PPPAGPLLNGAPAGESPQPK 258.17 2.3493e-41 102516090000.0 17287510.0 20714550.0 15446940.0 13512510.0 14252220.0 21053930.0 15052210.0 18906310.0 21736130.0 20676280.0 True False 16328537.358503189 19719391.92482655 16442674.468377853 14796734.887715736 15373788.629960896 20922524.61331121 16573834.28221303 18840728.42337592 17789396.71524715 20493104.245102428 0.7967820376654496 0.962245235713336 0.8023515750332177 0.7220348225795004 0.7501932575019727 1.0209543836342612 0.8087517676183172 0.9193691789216656 0.8680674485661963 1.0 24.288635201015715 -6.242754281994194 24.989268636888102 0.9112218436063813 0.8104140267168183 0.3312861771971427 0.0819100582546908 1196.5368115494343 1600237.536830151 0.027965597204850815 0.02791783239985373 5.71802063123091e-07 6.242754281994194 -0.10080781688956297 GLLASDLNTDGDMRVT(ph)PEPGAGPTQGLLR ddPTM_KYSE-520_SHP099_60min_R1 5 GLLASDLNTDGDMRVTPEPGAGPTQGLLR 29 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9;V9GYX5;C9JVY3;V9GY85;H7C3H1 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 GLLASDLNTDGDMRVT(1)PEPGAGPTQGLLR;GLLASDLNTDGDMRVT(1)PEPGAGPTQGLLR;GLLASDLNTDGDMRVT(1)PEPGAGPTQGLLR;GLLASDLNTDGDMRVT(1)PEPGAGPTQGLLR;GLLASDLNTDGDMRVT(1)PEPGAGPTQGLLR 210.21 9.177899999999999e-22 3256000000.0 1218570.0 1689920.0 1223556.0 991820.0 1043332.0 1360440.0 975256.0 1437910.0 1651770.0 1382410.0 True False 1150973.4929409306 1608733.7065783646 1302428.3775188194 1086082.2745984446 1125436.292652959 1351948.9893304035 1073844.3940613328 1432922.225820716 1351850.205733208 1370162.922898704 0.8400267396711786 1.1741185516646024 0.9505646049474278 0.7926665190302618 0.8213886639641339 0.9867067388382053 0.78373482168786 1.0458042630355513 0.9866346425965506 1.0 20.385916020234752 -9.598992211998038 9.127454721828947 0.9999958119314558 0.9323506117492752 0.029386633472580304 0.11831783969886582 0.0 0.0 0.11717877171736017 0.028420026639459733 2.517722076498891e-10 9.598992211998038 -0.06764520018218056 GLLDDLRNDLDR ddPTM_KYSE-520_SHP099_60min_R1 1 GLLDDLRNDLDR 12 1 Q07065 Q07065 CKAP4 Cytoskeleton-associated protein 4 0 70.41199999999999 0.025764 29464000.0 25383.0 37124.0 26783.0 25724.0 28318.0 28848.0 20325.0 23558.0 35767.0 21777.0 False True 23974.954390243976 35340.50731573996 28509.47503431516 28168.801225797382 30546.465492620293 28667.94893137775 22379.649352884357 23476.28279647853 29272.614412696483 21584.07272224962 1.1107706455014743 1.6373419312709099 1.3208570690612338 1.3050734950851046 1.41523177232126 1.3281992374787461 1.0368594306029477 1.0876669615868348 1.3562136668730385 1.0 14.39767949376425 -6.653654829621941 6.05578916814497 1.1285469514531203 1.3683529981422746 0.36426029764784074 0.15033197229052 0.2272219178703049 11.336009314822315 0.05592566103810818 0.042927806530185 2.219960107976986e-07 6.653654829621941 0.23980604668915428 GLLDGMTCNLRAKS(ph)FS(ph)IHFPLLK ddPTM_KYSE-520_SHP099_60min_R1 1 GLLDGMTCNLRAKSFSIHFPLLK 23 2 Q9H295-2;Q9H295 Q9H295-2 DCSTAMP Dendritic cell-specific transmembrane protein 2 GLLDGMT(0.585)CNLRAKS(0.721)FS(0.694)IHFPLLK 46.132 0.058974 810720000.0 916710.0 778350.0 756550.0 555430.0 758760.0 799270.0 642160.0 793150.0 974260.0 847230.0 True False 865858.26888392 740956.8976728307 805318.4235227985 608217.9002038809 818470.0952461527 794281.4594558468 707075.7996776489 790398.7477726018 797358.9430959729 839724.2013349655 1.0311222035847096 0.8823812586262039 0.9590272880578291 0.7243067417099046 0.9746891824065286 0.9458837296735341 0.8420333706633242 0.9412599357218147 0.9495486039682531 1.0 19.679556041969708 -7.918154158670812 1.9085844932186675 0.997687758399166 0.9063033674449026 0.10745121284490688 0.0794906158336111 0.6974992503716072 5.597204352389936 0.07394499470290922 0.021061318577861567 1.2073851814147136e-08 7.918154158670812 -0.09138439095426343 GLLEFEHQR ddPTM_KYSE-520_SHP099_60min_R1 9 GLLEFEHQR 9 0 Q14697;Q14697-2;F5H6X6;E9PKU7;E9PNH1 Q14697 GANAB Neutral alpha-glucosidase AB 0 ;;;;;;;; 250.08 1.6018e-13 5615465000.0 9394620.0 7848000.0 5769756.0 5164839.0 9421140.0 7937500.0 6086158.0 6243433.0 6213048.0 6602561.0 False True 8873481.70088933 7470970.299911841 6141683.70369601 5655703.745694526 10162530.119046004 7887959.11823388 6701406.24581805 6221775.988151215 5084915.101394436 6544067.446254721 1.3559581672661047 1.1416401742906244 0.9385116755193282 0.8642489998985844 1.5529378635701854 1.2053603027499802 1.0240429672914475 0.9507505904010878 0.7770266952710914 1.0 22.641756186778007 -7.067319658748187 2.7144498601423894 0.8955431163314272 1.165261149974506 0.2859407128414002 0.18969223038122018 0.4112542148479995 5.919861401531403 0.11029269489065464 0.05902135958518872 8.56407261932471e-08 7.067319658748187 0.2697180336430788 GLLPGGTQVLDGTSGFS(ph)PAPK ddPTM_KYSE-520_SHP099_60min_R1 1 GLLPGGTQVLDGTSGFSPAPK 21 0 Q96S94;Q96S94-3 Q96S94 CCNL2 Cyclin-L2 1 GLLPGGTQVLDGTSGFS(1)PAPK 194.75 2.5987e-13 303490000.0 203760.0 285020.0 222540.0 227570.0 248480.0 297460.0 225880.0 253150.0 332040.0 296570.0 True False 192457.0266145104 271327.2113762578 236885.28447658918 249198.1843785846 268033.9623421954 295603.4418028155 248714.15477635985 252271.88173565414 271749.90604724287 293942.6205279686 0.6547435219459715 0.9230618237291011 0.80588954419439 0.8477783314681765 0.9118581097928667 1.0056501546861893 0.8461316508971339 0.858235125217748 0.9244998413606572 1.0 18.165175033719812 -3.764829915004786 1.8416730754148676 0.897794423580503 2.406155207734712e-19 0.5646750564514939 0.06392840459865036 4.020322363634645 3.889271415562363 0.017403073614494915 9.892785691573769 0.00017185813122705762 3.764829915004786 -0.897794423580503 GLLPGLLPAPADKLT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 GLLPGLLPAPADKLTPK 17 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GLLPGLLPAPADKLT(1)PK;GLLPGLLPAPADKLT(1)PK;GLLPGLLPAPADKLT(1)PK 153.19 9.6439e-06 1908073000.0 2106820.0 2721610.0 2091210.0 1694790.0 1879680.0 2468970.0 1791140.0 2238040.0 2680880.0 2247880.0 True False 1989950.494758453 2590859.7703801035 2226012.7426543008 1855862.3320428075 2027600.1220837801 2453560.24241208 1972205.9110418342 2230276.761602464 2194099.7714851582 2227965.532024176 0.893169335950418 1.1628814418983524 0.9991235100625183 0.8329852079698463 0.9100679938444302 1.101255924809099 0.8852048573884461 1.0010373722326793 0.9847996927904672 1.0 21.087295482808923 -5.000089977287147 24.999997208315783 0.9567587673021872 1.0412696516794941 0.08105756569930467 0.0921081627592191 6.679227241290713 1858183.9073456745 0.023622033781730455 0.048366449685959996 9.997928411002756e-06 5.000089977287147 0.08451088437730692 GLLS(ph)DSMTDVPVDTGVAAR ddPTM_KYSE-520_SHP099_60min_R1 1 GLLSDSMTDVPVDTGVAAR 19 0 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;A0A087WZ51;A0A087WYR3 O43399 TPD52L2 Tumor protein D54 1 GLLS(1)DSMTDVPVDTGVAAR 189.81 8.572e-13 133240000.0 124390.0 136300.0 100590.0 88230.0 100300.0 134710.0 111420.0 128130.0 144440.0 150520.0 True False 117489.83873468253 129751.94340952914 107074.19234969045 96615.35267268332 108193.03937106486 133869.22492186262 122683.42095440948 127685.54693576679 118213.33703609131 149186.50990278798 0.7875366131377466 0.8697297328966093 0.7177203382494939 0.6476145379072091 0.725219991013698 0.8973279488144986 0.822349293071818 0.8558786382158043 0.7923862359480142 1.0 17.186757561127507 -6.257596271403384 24.91885323538475 0.8613783933874967 0.7488071225026671 0.40802202871663307 0.07396397189393926 385.287361399363 2498224.431886169 0.026106042180906154 0.02515162301641459 5.525908998296951e-07 6.257596271403384 -0.11257127088482954 GLLS(ph)PPMGQSGLR ddPTM_KYSE-520_SHP099_60min_R1 2 GLLSPPMGQSGLR 13 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 GLLS(1)PPMGQSGLR;GLLS(0.999)PPMGQS(0.001)GLR 143.93 0.00028009 0.0 1069640.0 1155500.0 899940.0 628000.0 801710.0 998320.0 714680.0 813780.0 995590.0 945470.0 True False 1010304.9369255237 1099988.045559139 957951.5723549116 687684.9311849147 864800.0158940823 992089.1145719998 786926.8290046452 810957.1871176792 814815.9527815168 937093.87136453 1.0781256475985581 1.1738290892431236 1.022257856579523 0.7338484992795401 0.9228531338432739 1.0586870161976298 0.8397524016017498 0.8653958924486621 0.8695136930039243 1.0 19.837834048435223 -5.010349828182152 10.6295072631436 0.8966262573783298 1.1191689070558284 0.5358159884918543 0.08587907196919849 0.2234859247330802 225.05395003862768 0.02322880555359352 0.04382582179446958 9.764503643780801e-06 5.010349828182152 0.2225426496774986 GLLSDS(ph)MTDVPVDTGVAAR ddPTM_KYSE-520_SHP099_60min_R1 12 GLLSDSMTDVPVDTGVAAR 19 0 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;A0A087WZ51;A0A087WYR3 O43399 TPD52L2 Tumor protein D54 1 GLLS(0.014)DS(0.985)MT(0.001)DVPVDTGVAAR;GLLS(0.002)DS(0.923)MT(0.075)DVPVDTGVAAR;GLLSDS(1)MTDVPVDTGVAAR;GLLSDS(0.953)MT(0.047)DVPVDTGVAAR;GLLSDS(1)MTDVPVDTGVAAR;GLLSDS(0.999)MT(0.001)DVPVDTGVAAR;GLLSDS(0.998)MT(0.002)DVPVDTGVAAR;GLLSDS(0.992)MT(0.008)DVPVDTGVAAR;GLLSDS(0.999)MT(0.001)DVPVDTGVAAR;GLLSDS(0.999)MT(0.001)DVPVDTGVAAR;GLLS(0.001)DS(0.994)MT(0.006)DVPVDTGVAAR;GLLSDS(1)MTDVPVDTGVAAR 272.32 1.9868999999999998e-35 18313930000.0 6150021.0 6590722.0 5355173.0 4577978.0 4463625.0 6317400.0 4741191.0 6446785.0 6729848.0 7207420.0 True False 5808867.07536708 6274093.822244588 5700376.020159755 5013067.65270072 4814886.892947854 6277970.763279461 5220476.85584507 6424422.607525929 5507877.248862261 7143567.866087905 0.8131604800652984 0.8782857445827732 0.7979732434853316 0.7017596454145638 0.6740170994672263 0.8788284623265603 0.7307940448956645 0.8993296806241713 0.771026096778526 1.0 22.768213379863333 -9.076422947605751 0.6189770041627011 1.0131815079307578 0.7853773569026784 0.41898410868081815 0.07288524281473638 5.281387226822905 2.1992904830632343 0.25224163064714533 0.030442353488323342 8.386428571827062e-10 9.076422947605751 -0.22780415102807938 GLLSDSMT(ph)DVPVDTGVAAR ddPTM_KYSE-520_SHP099_60min_R1 1 GLLSDSMTDVPVDTGVAAR 19 0 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;A0A087WZ51;A0A087WYR3 O43399 TPD52L2 Tumor protein D54 1 GLLSDS(0.439)MT(0.561)DVPVDTGVAAR 128.57 1.1663e-05 277650000.0 392620.0 404860.0 325720.0 278900.0 309830.0 387110.0 258890.0 348640.0 390820.0 422330.0 True False 370840.58593143447 385409.91789275064 346716.43237042625 305406.5721456571 334211.8583084452 384693.9028988369 285061.1277229143 347430.6492131877 319856.93977045984 418588.4847677679 0.8859311696956407 0.9207370291291586 0.8282990215623917 0.7296105441483802 0.7984258298310937 0.9190264828050976 0.6810056609203324 0.8300052721372437 0.7641322000243649 1.0 18.675173098507877 -4.860254591598332 5.192470772974461 0.8062089077079093 0.9026742409386659 0.12320466645271144 0.08657079944304023 0.33330775673295476 14.067397649006475 0.021540620153683635 0.04709431985176553 1.3795752945092687e-05 4.860254591598332 0.09646533323075657 GLLSGQT(ph)SPTNAK ddPTM_KYSE-520_SHP099_60min_R1 2 GLLSGQTSPTNAK 13 0 G3V1P3;Q969J3 G3V1P3 LOH12CR1 Loss of heterozygosity 12 chromosomal region 1 protein 1 GLLSGQT(0.421)S(0.421)PT(0.158)NAK;GLLSGQT(0.688)S(0.312)PTNAK 155.43 0.0020747 0.0 1431560.0 1692550.0 1109760.0 950590.0 1078160.0 1578210.0 1134530.0 1358060.0 1633070.0 1561160.0 True False 1352148.5130558917 1611237.3574306564 1181296.9052787814 1040933.7877946943 1163005.0581087482 1568359.8059827234 1249219.364345777 1353349.2068335877 1336545.65434457 1547329.3369641001 0.873859546739314 1.041302144889171 0.7634424534317408 0.6727293039224818 0.751620893061198 1.0135914627327403 0.8073390289340584 0.874635524903117 0.863775811920497 1.0 20.561348865165517 -6.236899082082948 24.992393915103328 0.8975000405250534 0.8214631735507536 0.14660733288000272 0.10733743848939344 2067.1923084577907 2105277.294711974 0.03863331543641955 0.038616257439199754 5.795633551297552e-07 6.236899082082948 -0.07603686697429979 GLLSGQTS(ph)PTNAK ddPTM_KYSE-520_SHP099_60min_R1 1 GLLSGQTSPTNAK 13 0 G3V1P3;Q969J3 G3V1P3 LOH12CR1 Loss of heterozygosity 12 chromosomal region 1 protein 1 GLLS(0.005)GQT(0.483)S(0.505)PT(0.007)NAK 112.02 0.00015139 651030000.0 1368800.0 1502400.0 1078500.0 856760.0 1018300.0 1590900.0 1152800.0 1394900.0 1566200.0 1597400.0 True False 1292869.9353648496 1430222.4488516245 1148021.8356610134 938186.2128057132 1098434.416665556 1580970.6029856086 1269336.2742437941 1390061.4174721085 1281817.5606890505 1583248.2787583938 0.816593299175248 0.9033469153512838 0.7251053742255186 0.5925704928234328 0.6937853218618144 0.9985613906527842 0.8017291357734657 0.8779806907873065 0.8096124770110411 1.0 20.594456080293273 -6.2443659143791646 24.978681501660233 0.8839600652036829 0.7452903869386119 0.37116944578370714 0.09765937310490957 1072.5983576514232 1569225.1188305635 0.034765345033094225 0.03468122510803737 5.696840832660724e-07 6.2443659143791646 -0.13866967826507093 GLLSQGS(ph)PLSWEETKR ddPTM_KYSE-520_SHP099_60min_R1 1 GLLSQGSPLSWEETKR 16 1 D6RGF8;A0A0C4DGB2;E1CEI4;P48506 D6RGF8 GCLC Glutamate--cysteine ligase catalytic subunit 1 GLLSQGS(1)PLSWEETKR 198.35 1.301e-12 180860000.0 183230.0 202370.0 156660.0 126860.0 163240.0 171120.0 156180.0 158840.0 209170.0 135110.0 True False 173065.8666400506 192647.84143643733 166758.55426486232 138916.7362581501 176086.05929145214 170051.97660625874 171968.19856991284 158289.02111353487 171190.0007466022 133913.03051398927 1.292375103272502 1.4386041499995201 1.2452750387681042 1.03736533871988 1.3149284921384647 1.2698687794127264 1.2841782305266263 1.1820285188527575 1.2783670124523003 1.0 17.03093682451841 -13.740851717453213 0.19568727796852384 1.2677511523556585e-16 1.3026969075843844 0.40589093806005594 0.0956025509565382 137.02027453083812 1.4798314579937708 53.81416458881735 0.2600078159988547 1.8161356458978375e-14 13.740851717453213 1.3026969075843842 GLLTDS(ph)PAATVLAEAR ddPTM_KYSE-520_SHP099_60min_R1 6 GLLTDSPAATVLAEAR 16 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 GLLTDS(0.999)PAATVLAEAR;GLLTDS(0.994)PAAT(0.005)VLAEAR;GLLTDS(1)PAATVLAEAR;GLLTDS(1)PAATVLAEAR;GLLTDS(1)PAATVLAEAR;GLLTDS(1)PAATVLAEAR 312.38 4.4846e-47 1110361000.0 997270.0 1067960.0 838923.0 705829.0 707603.0 948030.0 729069.0 920630.0 1116970.0 1009890.0 True False 941949.4450915433 1016653.5985593598 893001.3189042599 772910.7759447735 763287.3303896672 942112.993116128 802770.409547751 917436.5494066571 914156.4045223136 1000943.1602825308 0.9410618729096109 1.0156956347774977 0.8921598691500098 0.7721824840949092 0.7625681064389492 0.9412252668275418 0.8020139818140696 0.9165720750294125 0.913295020932337 1.0 19.93292862071409 -10.023409389697544 19.71686896563648 0.9999999999985855 0.8815511868420507 0.16732590189278207 0.07738771335891342 0.0 0.0 0.08131283473366259 0.019721259195604905 9.475248535085822e-11 10.023409389697544 -0.11844881315653477 GLLYDS(ph)DEEDEERPAR ddPTM_KYSE-520_SHP099_60min_R1 19 GLLYDSDEEDEERPAR 16 1 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR;GLLYDS(1)DEEDEERPAR 384.32 7.957499999999998e-86 154084020000.0 59288418.0 55466288.0 52750192.0 49963989.0 52570470.0 54160836.0 50758142.0 54358843.0 63025069.0 54563229.0 True False 55999571.26500884 52801604.267884344 56150553.77961143 54712551.49233898 56707466.90394197 53822798.13258196 55889270.34508796 54170284.86108235 51581305.20229792 54079841.24060976 1.03549807063704 0.9763638919160591 1.0382899152715472 1.011699558231212 1.0485878952869239 0.9952469699960069 1.0334584766332386 1.0016724091343057 0.9537991240174789 1.0 25.688587580592706 -7.541822391490166 8.494459065313533 0.9769909538727889 1.0186830907630782 0.3588274283098212 0.022882903611658414 0.20896939720914864 75.61837174843866 0.014114126725272796 0.005442875573143613 2.871954852837746e-08 7.541822391490166 0.04169213689028928 GLLYDS(ph)DEEDEERPARK ddPTM_KYSE-520_SHP099_60min_R1 11 GLLYDSDEEDEERPARK 17 2 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLY(0.073)DS(0.927)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK;GLLYDS(1)DEEDEERPARK 271.72 5.4040999999999994e-30 23864660000.0 14622560.0 14097200.0 14602790.0 11604420.0 12499360.0 12312860.0 11532080.0 11289300.0 17422190.0 11636650.0 True False 13811417.44744931 13419949.351671398 15544109.2086901 12707300.587803915 13482988.520370016 12236010.873516494 12697855.188654905 11250140.053242438 14258759.473669471 11533558.334176699 1.19749838230954 1.1635567240254787 1.3477288412049884 1.101767574205537 1.1690224412718049 1.0609051013561235 1.1009486249380744 0.9754266400080169 1.2362845065271268 1.0 23.459334346245555 -5.766950424865593 1.5983009966496273 1.076718168375987 1.224060901504021 0.35282768927003205 0.08545306093200951 0.4115012291887812 2.1812893803417994 0.02985110568888906 0.04017476807361465 1.7102105261310242e-06 5.766950424865593 0.14734273312803392 GLMAGGRPEGQY(ph)SEDEDT(ph)DTDEYKEAK ddPTM_KYSE-520_SHP099_60min_R1 1 GLMAGGRPEGQYSEDEDTDTDEYKEAK 27 2 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YC88 H0YE35 RIC8A Synembryn-A 2 GLMAGGRPEGQY(0.547)S(0.453)EDEDT(0.999)DT(0.001)DEYKEAK 121.47 2.8075e-06 653830000.0 2417500.0 2417400.0 2071500.0 2206800.0 2127500.0 2202200.0 1975400.0 1990100.0 2789600.0 2115700.0 True False 2283396.45583323 2301264.4754086225 2205032.2045171894 2416533.6085013873 2294922.1461808626 2188455.252935388 2175092.7100461368 1983196.8075928316 2283078.960093326 2096956.5439896933 1.088909764190351 1.097430694023926 1.051539294334574 1.1524004230930143 1.0944061538893495 1.0436340510765227 1.0372617001913549 0.9457500744481709 1.088758356312675 1.0 20.999865533562602 -6.484618576300662 2.2961678128594074 1.012904421207941 1.0975558929342184 0.46670529182800746 0.04019472910484743 0.265086121165603 2.785481728559825 0.016469749663701065 0.013118649163691204 3.2762831157182436e-07 6.484618576300662 0.0846514717262774 GLMAGGRPEGQYS(ph)EDEDT(ph)DTDEYK ddPTM_KYSE-520_SHP099_60min_R1 9 GLMAGGRPEGQYSEDEDTDTDEYK 24 1 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YC88 H0YE35 RIC8A Synembryn-A 2 GLMAGGRPEGQY(0.122)S(0.878)EDEDT(0.679)DT(0.316)DEY(0.005)K;GLMAGGRPEGQY(0.027)S(0.972)EDEDT(0.944)DT(0.055)DEY(0.001)K;GLMAGGRPEGQY(0.001)S(0.999)EDEDT(0.91)DT(0.09)DEYK;GLMAGGRPEGQYS(1)EDEDT(0.997)DT(0.003)DEYK;GLMAGGRPEGQY(0.003)S(0.996)EDEDT(0.996)DT(0.004)DEYK;GLMAGGRPEGQY(0.003)S(0.997)EDEDT(0.975)DT(0.025)DEYK;GLMAGGRPEGQYS(1)EDEDT(0.996)DT(0.004)DEYK;GLMAGGRPEGQYS(1)EDEDT(0.953)DT(0.047)DEYK;GLMAGGRPEGQYS(1)EDEDT(0.924)DT(0.076)DEYK 228.61 9.6749e-22 14337720000.0 13946620.0 11773930.0 10031200.0 13188800.0 12291570.0 12918280.0 13200110.0 13566610.0 13382060.0 12780600.0 True False 13172973.186702305 11208292.72977078 10677827.20248747 14442259.586642694 13258846.629533393 12837652.222727336 14534505.939458916 13519550.596380563 10952215.238280242 12667373.827156337 1.0399135106017052 0.8848158176039949 0.8429392980884741 1.140114737569468 1.0466926144635484 1.0134422807674592 1.1473969378167255 1.0672733575918734 0.864600302140043 1.0 23.594614123240344 -5.256535376759725 24.983451354722284 1.0463902448773383 0.9187821737720998 0.2700782352524451 0.08791285660629014 517.096332071643 2634341.4873720417 0.024196126942579284 0.04028656068744234 5.539424190593879e-06 5.256535376759725 -0.12760807110523853 GLMAGGRPEGQYS(ph)EDEDT(ph)DTDEYKEAK ddPTM_KYSE-520_SHP099_60min_R1 4 GLMAGGRPEGQYSEDEDTDTDEYKEAK 27 2 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YC88 H0YE35 RIC8A Synembryn-A 2 GLMAGGRPEGQY(0.003)S(0.997)EDEDT(0.949)DT(0.051)DEYKEAK;GLMAGGRPEGQY(0.001)S(0.999)EDEDT(0.999)DT(0.001)DEYKEAK;GLMAGGRPEGQYS(1)EDEDT(0.997)DT(0.003)DEYKEAK;GLMAGGRPEGQYS(1)EDEDT(0.985)DT(0.015)DEYKEAK 230.63 1.0399e-22 12591500000.0 2518660.0 2264150.0 2010120.0 1917380.0 2134620.0 1920650.0 1670670.0 2119490.0 2516200.0 1938040.0 True False 2378944.9089757698 2155376.835441563 2139695.551505718 2099607.21871868 2302602.449673604 1908662.5109210545 1839557.6277679345 2112137.983882686 2059321.5082401882 1920870.4733723039 1.238472318645861 1.1220833811129163 1.1139197468891497 1.0930498687048813 1.198728639745879 0.9936445675955355 0.9576687513647832 1.09957335133305 1.0720772362255213 1.0 20.873328808929568 -6.267247637530315 24.974542295812345 1.0266333615286303 1.1459897150602087 0.5806908056453121 0.0544758266006574 393.5097599125244 1692019.3461451929 0.019826427204564713 0.017944729037331575 5.404460692159196e-07 6.267247637530315 0.11935635353157847 GLMAGGRPEGQYS(ph)EDEDTDT(ph)DEYKEAK ddPTM_KYSE-520_SHP099_60min_R1 2 GLMAGGRPEGQYSEDEDTDTDEYKEAK 27 2 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YC88 H0YE35 RIC8A Synembryn-A 2 GLMAGGRPEGQYS(0.986)EDEDT(0.384)DT(0.63)DEYKEAK;GLMAGGRPEGQYS(1)EDEDT(0.091)DT(0.909)DEYKEAK 196.84 4.1872e-15 3428600000.0 5685100.0 5598300.0 4876600.0 4767600.0 4826300.0 5301800.0 4442500.0 4705000.0 6196900.0 4629000.0 True False 5369736.170034121 5329349.2647803845 5190953.438835883 5220711.270568792 5206102.352109375 5268709.499597147 4891591.254621832 4688679.453155258 5071699.171136484 4587990.661307502 1.170389516116372 1.1615867725549398 1.1314219714118918 1.1379079985051617 1.1347238336849017 1.1483697087769686 1.0661728882481658 1.021946163207547 1.1054292707934879 1.0 22.12943102412624 -7.0897179758584254 0.4491032510195414 1.0036915450341326 1.16847484721229 0.7498767249610179 0.02801400391055348 0.5020301696183792 0.243951149368658 0.030680385929959177 0.025696997156342896 8.133585271934636e-08 7.0897179758584254 0.1647833021781573 GLMAGGRPEGQYS(ph)EDEDTDTDEYK ddPTM_KYSE-520_SHP099_60min_R1 3 GLMAGGRPEGQYSEDEDTDTDEYK 24 1 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YC88 H0YE35 RIC8A Synembryn-A 1 GLMAGGRPEGQY(0.057)S(0.937)EDEDT(0.005)DT(0.001)DEYK;GLMAGGRPEGQYS(1)EDEDTDTDEYK;GLMAGGRPEGQYS(1)EDEDTDTDEYK 279.32 1.1601000000000001e-38 1605940000.0 1743470.0 1735050.0 1449940.0 1586570.0 1948260.0 1856110.0 1841350.0 1852200.0 2018180.0 1544370.0 True False 1646756.2435787215 1651695.5936368564 1543405.4523860272 1737357.135780337 2101576.97791696 1844525.3290009536 2027491.6278442135 1845775.150506731 1651729.3861776448 1530688.0833016792 1.0758274409680413 1.0790543231212497 1.0083082694789893 1.1350170911586863 1.3729622650382691 1.2050301750715473 1.3245622344370342 1.2058466846657694 1.0790763998207138 1.0 20.545748896237463 -5.524571256170079 24.99007008757564 1.218447810716305 1.0593291314226303 0.2681480613289814 0.10289900426186661 61.443359796479115 907201.8738593493 0.029570175983428884 0.03844358215837812 2.9883313010721445e-06 5.524571256170079 -0.15911867929367474 GLMAGGRPEGQYS(ph)EDEDTDTDEYKEAK ddPTM_KYSE-520_SHP099_60min_R1 3 GLMAGGRPEGQYSEDEDTDTDEYKEAK 27 2 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3;H0YC88 H0YE35 RIC8A Synembryn-A 1 GLMAGGRPEGQYS(1)EDEDTDTDEYKEAK;GLMAGGRPEGQYS(1)EDEDTDTDEYKEAK;GLMAGGRPEGQY(0.001)S(0.999)EDEDTDTDEYKEAK 283.28 5.029599999999999e-52 3283220000.0 896330.0 1024010.0 923190.0 832050.0 947460.0 827800.0 749760.0 708080.0 1214000.0 663060.0 True False 846608.7881104444 974815.0225296535 982700.3045562274 911127.7818350446 1022019.711690022 822633.3931431817 825553.0577524513 705623.8357471137 993568.2024495626 657185.8042528741 1.288233529439847 1.4833172235634002 1.4953157816204148 1.386408190710793 1.5551457518957088 1.251751617000306 1.2561942945359061 1.0737052309723985 1.5118528063446335 1.0 19.325941791676758 -6.385383185846144 6.087464513882357 1.2218754114404706 1.443366551928094 0.38353217360015557 0.14169367834957672 0.25401674720925466 11.585485671905783 0.04752689869484608 0.04172105997750841 4.117340783901165e-07 6.385383185846144 0.22149114048762342 GLNGCES(ph)PDADDYFEHSPLSEDR ddPTM_KYSE-520_SHP099_60min_R1 2 GLNGCESPDADDYFEHSPLSEDR 23 0 Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 GLNGCES(1)PDADDYFEHSPLSEDR;GLNGCES(1)PDADDYFEHSPLSEDR 187.89 3.601699999999999e-15 696110000.0 294158.0 515250.0 371822.0 242426.0 335379.0 337590.0 243066.0 259838.0 456150.0 282979.0 True False 277840.4693505652 490496.6165939824 395790.24105623417 265466.09415196505 361771.4192545204 335482.9755873476 267637.4833755569 258936.68262464504 373324.65860574006 280472.0262143304 0.9906173998908747 1.7488254469240934 1.4111576345007049 0.9464975802938075 1.2898663162153035 1.1961370269810048 0.9542394904332967 0.9232174991554112 1.33105844331318 1.0 18.097497360584985 -5.2413001940387085 22.863817764679045 1.0952712454295208 1.4200629036519434 0.26832958828388154 0.2183865800271003 326.60222933553126 370785.4378594614 0.057431648381092965 0.09923930475873596 5.737197572166777e-06 5.2413001940387085 0.3247916582224226 GLNNDS(ph)PERR ddPTM_KYSE-520_SHP099_60min_R1 3 GLNNDSPERR 10 1 G5EA48;Q7Z6B7-2;Q7Z6B7 G5EA48 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 GLNNDS(1)PERR;GLNNDS(1)PERR;GLNNDS(1)PERR 89.35600000000001 0.005577 1102410000.0 1911010.0 1750880.0 1754530.0 1481640.0 1777640.0 1733210.0 1444190.0 1547890.0 1906680.0 1650190.0 True False 1805002.4657960113 1666765.0966755417 1867629.8111472551 1622454.6201286924 1917530.1546119615 1722392.3934883946 1590182.8191361392 1542520.7308702439 1560474.975491379 1635570.6004283945 1.103591899562904 1.019072546448913 1.1418827231658963 0.9919807923324944 1.1723921633891652 1.0530834884396059 0.9722495737693212 0.9431086193810413 0.9540859777515283 1.0 20.64136260492315 -6.717001014337902 3.9189800386162563 0.9610851935071177 1.0825564888896106 0.5428397494357746 0.05131078309850948 0.16001481412306065 5.126480279532963 0.01995782700066722 0.014485077349484255 1.918664259434092e-07 6.717001014337902 0.1214712953824929 GLNPDGT(ph)PALST(ph)LGGFSPASKPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58;Q9UK58-6 Q9UK58 CCNL1 Cyclin-L1 3 GLNPDGT(0.998)PALS(0.295)T(0.342)LGGFS(0.343)PAS(0.03)KPS(0.514)S(0.477)PR 58.16 0.044363 1955800000.0 442660.0 409360.0 518410.0 375920.0 363710.0 487190.0 362950.0 341890.0 476170.0 431840.0 True False 418104.76737916726 389693.7311381126 551827.5380853278 411647.3237755308 392331.90777318075 484149.266496045 399640.52805064555 340704.0633877255 389709.53126886976 428014.2335664364 0.976847811567624 0.9104690932611809 1.2892738016846188 0.9617608282450608 0.9166328523798566 1.1311522573954198 0.9337085001137312 0.7960110591388578 0.9105060082268946 1.0 18.70729924852648 -6.987731266236068 23.785519973659923 0.884927067005391 1.0292253498212698 0.207013976865014 0.11571145040094377 177.6799287940906 344467.9942723271 0.048588813517810664 0.03272743325973078 1.0286526133263343e-07 6.987731266236068 0.14429828281587875 GLNPDGT(ph)PALSTLGGFS(ph)PASKPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58;Q9UK58-6 Q9UK58 CCNL1 Cyclin-L1 3 GLNPDGT(1)PALS(0.015)T(0.015)LGGFS(0.966)PAS(0.018)KPS(0.585)S(0.401)PR 89.742 0.030872000000000004 686340000.0 343200.0 234730.0 283560.0 280680.0 273580.0 255780.0 270020.0 298310.0 313900.0 278460.0 True False 324162.0118477613 223453.21846308687 301838.7313120411 307355.7428104812 295109.1895427312 254183.5821432263 297316.25674124656 297275.23223607714 256903.67277505572 275993.0610386016 1.1745295719678348 0.8096334655016334 1.0936460872464637 1.11363576190596 1.0692630765142894 0.920978162228778 1.0772598978481658 1.077111254599618 0.9308338108512229 1.0 18.074272469950973 -9.558714780371545 10.170609094111892 1.0000040465433606 1.0283007981704917 0.0071096829895722635 0.10403155466831839 0.0 0.0 0.09636699234850976 0.023372428722117335 2.762391440389345e-10 9.558714780371545 0.028296751627131078 GLNPDGTPALSTLGGFS(ph)PAS(ph)KPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58;Q9UK58-6 Q9UK58 CCNL1 Cyclin-L1 3 GLNPDGTPALSTLGGFS(1)PAS(0.989)KPS(0.242)S(0.769)PR 119.78 0.0018230999999999998 977240000.0 956800.0 799230.0 733490.0 741730.0 751300.0 661600.0 751110.0 738800.0 905050.0 784370.0 True False 903724.3966664873 760833.7911313116 780771.9390254945 812223.7961907436 810423.0356877478 657470.7089919407 827039.5289271815 736237.275237216 740715.7344538518 777421.0920306266 1.1624644686523182 0.9786636855246763 1.0043102084947495 1.0447668638230694 1.0424505380615798 0.8457073209508954 1.063824402766011 0.9470250843261298 0.9527857451347246 1.0 19.568336724068125 GLNPDGTPALSTLGGFS(ph)PASKPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 6 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58;Q9UK58-6 Q9UK58 CCNL1 Cyclin-L1 2 GLNPDGTPALSTLGGFS(0.985)PAS(0.015)KPS(0.594)S(0.405)PR;GLNPDGTPALS(0.001)TLGGFS(0.511)PAS(0.482)KPS(0.551)S(0.454)PR;GLNPDGTPALS(0.004)T(0.001)LGGFS(0.991)PAS(0.022)KPS(0.52)S(0.462)PR;GLNPDGTPALSTLGGFS(0.977)PAS(0.023)KPS(0.557)S(0.443)PR;GLNPDGTPALSTLGGFS(1)PAS(0.01)KPS(0.648)S(0.342)PR;GLNPDGT(0.013)PALS(0.081)T(0.085)LGGFS(0.763)PAS(0.073)KPS(0.51)S(0.475)PR 219.93 7.8816e-22 19959850000.0 4654660.0 4268450.0 4201080.0 4277710.0 4561210.0 4563250.0 4269890.0 4156080.0 5123970.0 4384280.0 True False 4396456.730965332 4063387.254925928 4471888.338765664 4684262.272259586 4920151.277265151 4534769.064098363 4701532.151310579 4141663.528516367 4193586.212772229 4345438.690118222 1.0117405961711365 0.9350925291309035 1.0290993977052296 1.0779722385479442 1.1322565172657617 1.043569910308639 1.0819464929978495 0.9531059632563104 0.9650547417246241 1.0 22.051070399783924 -7.271742644966044 24.721846056053067 0.9693102583762815 1.0443470633959764 0.3038391113376794 0.04972707839426591 867.9668075504682 2082600.1131191486 0.03035196381416837 0.014844704319108795 5.348812264174683e-08 7.271742644966044 0.0750368050196949 GLNPDGTPALSTLGGFS(ph)PASKPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58;Q9UK58-6 Q9UK58 CCNL1 Cyclin-L1 2 GLNPDGTPALSTLGGFS(0.996)PAS(0.004)KPS(0.142)S(0.858)PR 213.6 1.1922e-21 1496300000.0 830260.0 740430.0 709330.0 698910.0 848110.0 784490.0 694080.0 682680.0 935700.0 705020.0 True False 784203.822717724 704858.6313919118 755054.5467681283 765334.196265047 914851.4319141968 779593.7069182091 764244.3799680187 680311.9424187101 765800.4670774754 698774.0712972601 1.1222566133025875 1.008707478346121 1.080541734135018 1.0952527114296318 1.3092234951073576 1.115659179326601 1.0936930996154655 0.973579258823563 1.0959199811976168 1.0 19.414466551058876 -7.063166155435341 5.531089163854541 1.0261981868427197 1.1210524080425686 0.24901218379776258 0.0766254492180862 0.35435204992071867 21.635513456437604 0.03928730038443692 0.02269953488351014 8.646370565657007e-08 7.063166155435341 0.09485422119984888 GLNPDGTPALSTLGGFSPASKPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58;Q9UK58-6 Q9UK58 CCNL1 Cyclin-L1 1 GLNPDGTPALSTLGGFS(0.005)PAS(0.055)KPS(0.47)S(0.47)PR;GLNPDGTPALSTLGGFS(0.001)PAS(0.018)KPS(0.49)S(0.49)PR 109.08 0.00038139999999999995 2571130000.0 1208210.0 1209000.0 970420.0 967640.0 1001010.0 1246710.0 1006560.0 1193370.0 1368820.0 1278360.0 True False 1141188.1827930787 1150917.8252540028 1032974.8259268976 1059604.2146684262 1079783.7920322004 1238928.8204464072 1108312.9078789318 1189230.4780046528 1120276.7931441609 1267034.724949029 0.9006763274297688 0.908355392785547 0.8152695467509405 0.8362866414028649 0.8522132588557417 0.9778175736235228 0.8747297023951082 0.9385934375654099 0.8841721312643803 1.0 20.27302463352291 -6.235642389483101 24.715642269341338 0.9274538596224678 0.8610174969798511 0.40109673203452934 0.04378628484893854 749.2483346674449 717842.0826475552 0.014419795045492194 0.014415320885285953 5.812428325221515e-07 6.235642389483101 -0.06643636264261676 GLNPDGTPALSTLGGFSPASKPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 GLNPDGTPALSTLGGFSPASKPSSPR 26 1 Q9UK58;Q9UK58-6 Q9UK58 CCNL1 Cyclin-L1 1 GLNPDGTPALSTLGGFS(0.001)PAS(0.009)KPS(0.482)S(0.508)PR;GLNPDGTPALSTLGGFS(0.001)PAS(0.022)KPS(0.319)S(0.658)PR 267.05 2.2040999999999997e-38 2243550000.0 2043200.0 2154250.0 1690190.0 1599700.0 1698800.0 2224380.0 1688440.0 1821430.0 2509370.0 2193300.0 True False 1929859.6229817772 2050756.5964048288 1799142.3517996164 1751735.0070326591 1832485.8951501984 2210496.8193281326 1859123.9927864224 1815111.8844549572 2053731.664069901 2173869.0683615804 0.8877533845386051 0.9433671172985869 0.8276222234283911 0.8058144036949388 0.8429605636420971 1.0168491062776648 0.8552143364308608 0.8349683570515062 0.9447356761084854 1.0 21.051833619112642 GLNSSFETS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 GLNSSFETSPK 11 0 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 GLNSSFET(0.022)S(0.978)PK;GLNSSFET(0.001)S(0.999)PK;GLNSSFET(0.001)S(0.999)PK;GLNSS(0.002)FET(0.297)S(0.701)PK;GLNSSFET(0.16)S(0.839)PK 172.09 1.1013e-05 5218860000.0 11181340.0 10764030.0 9307170.0 9209730.0 9466420.0 10162600.0 8847880.0 9591860.0 12181430.0 10535330.0 True False 10561088.780751316 10246909.841661582 9907125.070198528 10085019.970193699 10211373.397438059 10099171.443774937 9742310.057387372 9558588.076416945 9969589.380860936 10441995.172562722 1.0114052540937313 0.9813172360571718 0.9487770207201769 0.9658135062821129 0.9779140124742978 0.9671687524153827 0.9329931585283783 0.9153986300944662 0.9547590490232102 1.0 23.315894061038033 -6.618560186870555 5.347222499812573 0.9439176969134092 0.9748569434046358 0.17163280292972716 0.0252006422103735 0.30586357129390607 13.807931095347133 0.009783145906638284 0.007506079496016453 2.4067989487635045e-07 6.618560186870555 0.03093924649122659 GLNVIGASDQS(ph)PLQS(ph)PSNLR ddPTM_KYSE-520_SHP099_60min_R1 4 GLNVIGASDQSPLQSPSNLR 20 0 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;A0JP02;Q9HAU0-5;H0YGJ6 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 2 GLNVIGAS(0.196)DQS(0.807)PLQS(0.922)PS(0.076)NLR;GLNVIGASDQS(1)PLQS(1)PSNLR;GLNVIGAS(0.076)DQS(0.954)PLQS(0.936)PS(0.034)NLR;GLNVIGAS(0.001)DQS(0.999)PLQS(0.997)PS(0.003)NLR 288.37 8.464399999999999e-44 1159650000.0 1523730.0 1474990.0 1401530.0 1340950.0 1342300.0 1394390.0 1345030.0 1360160.0 1660300.0 1434560.0 True False 1439205.6594195508 1404129.2663948715 1491874.8663272883 1468393.4848286803 1447931.3733577325 1385687.0947872917 1480998.7586278021 1355441.9224237292 1358831.3727570102 1421850.9144707918 1.012205741665411 0.9875362122037132 1.049248448725413 1.0327337907822858 1.0183426114661591 0.9745656739989789 1.0415991884627545 0.9532939836580688 0.9556778132837948 1.0 20.439338771110314 -7.2708752350989085 24.95076540195826 0.9658644209036898 1.0158123748173955 0.43226759853490315 0.024528612760582776 614.5140658664034 1624919.296202815 0.013220137962891142 0.006481719521485407 5.359506042542763e-08 7.2708752350989085 0.049947953913705656 GLNVIGASDQSPLQS(ph)PSNLR ddPTM_KYSE-520_SHP099_60min_R1 2 GLNVIGASDQSPLQSPSNLR 20 0 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;A0JP02;Q9HAU0-5;H0YGJ6 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 GLNVIGASDQS(0.001)PLQS(0.998)PS(0.001)NLR;GLNVIGASDQS(0.001)PLQS(0.999)PSNLR 174.02 3.8205e-09 116920000.0 390310.0 452720.0 344950.0 328040.0 323330.0 489940.0 367180.0 468790.0 490110.0 482980.0 True False 368658.7262363054 430970.6516534258 367186.0289395143 359216.82297117804 348774.23150395206 486882.1027259853 404298.1377314677 467163.8769064081 401118.3786676733 478701.1729527537 0.7701228805484687 0.9002916140670524 0.767046436662386 0.7503988777705201 0.72858445144937 1.017089846934716 0.8445731086006147 0.9758987512498025 0.8379306367550147 1.0 18.86876581550817 -6.253747670214142 24.99363622670818 0.9279343066386788 0.7870594280539652 0.5401826631878703 0.0698317534244717 498.6662001147646 1620380.417104954 0.02280549397613353 0.022396176395581377 5.575095739353829e-07 6.253747670214142 -0.1408748785847136 GLPARPKS(ph)PLDPK ddPTM_KYSE-520_SHP099_60min_R1 1 GLPARPKSPLDPK 13 2 Q8IYH5-2 Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 GLPARPKS(1)PLDPK 71.286 0.016381 1491600000.0 1582800.0 1479200.0 1572200.0 1148600.0 1439900.0 1188200.0 1249000.0 1229400.0 1771400.0 1215600.0 True False 1494998.928766425 1408137.011675533 1673546.5276089404 1257762.5986608188 1553211.9380896962 1180784.0030595902 1375261.1090653169 1225135.4983441185 1449758.413360097 1204830.729722489 1.240837315886499 1.1687426100095173 1.389030414251147 1.043933033605909 1.2891536543456612 0.98004140658959 1.1414558702217725 1.0168527977588242 1.2032880450302117 1.0 20.200399041469282 -5.914067202074476 1.3074171484900179 1.077452190413198 1.241453923922705 0.29895617033534316 0.10862372902237281 0.5427635506104952 1.9395936794528923 0.04250192188446317 0.05210398703657461 1.218800988902015e-06 5.914067202074476 0.16400173350950698 GLPFYAGLS(ph)PAGK ddPTM_KYSE-520_SHP099_60min_R1 2 GLPFYAGLSPAGK 13 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 GLPFYAGLS(1)PAGK;GLPFYAGLS(1)PAGK 229.97 4.0119e-12 1075240000.0 1595350.0 1842260.0 1566900.0 1279960.0 1377770.0 1498190.0 1400540.0 1625740.0 1718700.0 1742410.0 True False 1506852.7552486188 1753755.0643113656 1667904.881128642 1401607.0135659946 1486192.6605610384 1488839.2404846377 1542120.251153193 1620100.6873905673 1406627.4049012046 1726973.6029744681 0.8725395412259213 1.0155077421512235 0.9657963956460662 0.8115972422229989 0.860576362025037 0.8621088579005043 0.8929611017198575 0.9381154897794457 0.8145042880090857 1.0 20.719814600570352 -5.227231673243981 24.770127117951304 0.8788896502756175 0.9577039063506377 0.20039518011685775 0.0619062853058022 766.2631825116275 554857.4955660492 0.016015302135623997 0.027737163057097215 5.926091144803093e-06 5.227231673243981 0.07881425607502024 GLPLGSAVS(ph)SPVLFS(ph)PVGR ddPTM_KYSE-520_SHP099_60min_R1 3 GLPLGSAVSSPVLFSPVGR 19 0 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 2 GLPLGS(0.002)AVS(0.499)S(0.499)PVLFS(1)PVGR;GLPLGSAVS(0.5)S(0.5)PVLFS(1)PVGR;GLPLGSAVS(0.602)S(0.398)PVLFS(1)PVGR 213.69 1.5312000000000002e-18 1145604000.0 1382070.0 1229540.0 1188730.0 1161850.0 1214590.0 1169440.0 1136420.0 1222770.0 1384590.0 1228540.0 True False 1305403.82201176 1170471.0528228353 1265357.4378352482 1272271.874677059 1310171.322928233 1162141.0911782577 1251300.423990398 1218528.4962666645 1133183.35867351 1217656.091389656 1.0720628190854458 0.9612492895978777 1.0391747282199792 1.04485320910691 1.0759781289583938 0.9544083090422998 1.0276304063508976 1.0007164624586347 0.930626772769854 1.0 20.215675292629296 -7.550804448429886 7.122141567276596 0.9648910363542551 1.022561895472335 0.24920255636740885 0.041128892117951024 0.2609545072727837 46.50926741932448 0.027017749352546395 0.010275549659315016 2.8131672416944376e-08 7.550804448429886 0.0576708591180799 GLPLGSAVSS(ph)PVLFS(ph)PVGR ddPTM_KYSE-520_SHP099_60min_R1 3 GLPLGSAVSSPVLFSPVGR 19 0 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 2 GLPLGSAVS(0.178)S(0.822)PVLFS(1)PVGR;GLPLGSAVS(0.005)S(0.995)PVLFS(1)PVGR;GLPLGS(0.002)AVS(0.449)S(0.55)PVLFS(1)PVGR 336.14 1.0889999999999997e-64 998520000.0 513538.0 466534.0 447748.0 394277.0 430293.0 430018.0 435737.0 439109.0 504570.0 444528.0 True False 485051.02342737763 444121.0063581889 476610.5525021303 431748.967536297 464154.6110677334 427334.0981549222 479785.5483433094 437585.83336781076 412952.80717460974 440589.8277575508 1.1009128964599997 1.0080146621146715 1.0817556885684638 0.9799340346411293 1.0534846286173223 0.9699136730639114 1.0889619281163416 0.9931818798336101 0.9372726766670854 1.0 18.7490766612297 -1.000000000000246 0.24629393058547996 0.9875029487985763 1.5449218655013806 0.27582028819085547 0.045382596742017764 73.59857110214713 0.994279845205735 0.05829398823852319 16.917133268405554 0.09999999999994336 1.000000000000246 0.5574189167028043 GLPLGSAVSSPVLFS(ph)PVGR ddPTM_KYSE-520_SHP099_60min_R1 4 GLPLGSAVSSPVLFSPVGR 19 0 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 GLPLGSAVS(0.006)S(0.006)PVLFS(0.987)PVGR;GLPLGSAVS(0.002)S(0.002)PVLFS(0.996)PVGR;GLPLGSAVSSPVLFS(1)PVGR;GLPLGSAVSSPVLFS(1)PVGR 260.09 4.6666999999999997e-35 1613654000.0 681289.0 682483.0 494336.0 522997.0 460688.0 719219.0 492083.0 580920.0 630957.0 641588.0 True False 643496.5410540497 649695.4922521313 526201.6895255656 572702.4776352188 496941.5246438398 714730.0874402586 541827.5519072769 578904.9241077479 516391.11393160606 635904.0294679106 1.011939712966581 1.0216879625621504 0.8274860122617278 0.9006114933953548 0.781472520404774 1.123959047780064 0.8520586862150381 0.9103652395348768 0.8120582509340185 1.0 19.27844952507524 -4.738597251059279 24.9296234755198 0.8997321703658598 1.0168139873315944 0.19303628859345057 0.09468739045328067 362.92182298412814 396082.2082876794 0.02334985708298977 0.061684506217856414 1.825587901520336e-05 4.738597251059279 0.11708181696573461 GLPPS(ph)MER ddPTM_KYSE-520_SHP099_60min_R1 14 GLPPSMER 8 0 P38159;P38159-2;H3BUY5 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER;GLPPS(1)MER 114.4 0.0010308 22521840000.0 37297630.0 34700070.0 33091950.0 30724520.0 31293740.0 33880610.0 32171480.0 37523440.0 41500340.0 35142890.0 True False 35228656.11291795 33033026.55133309 35225110.045992054 33644569.14313623 33756379.30097577 33669148.54561588 35423687.16178756 37393279.9446767 33964924.3944363 34831551.33535473 1.011400720391117 0.9483650680181993 1.0112989142185538 0.9659222128583838 0.9691322380669379 0.9666278777379925 1.0169999843168571 1.0735462105795375 0.9751194848436513 1.0 25.05389139363866 -6.825429564169964 6.544476141525241 1.0231366250773595 0.9779072374395623 0.26712590668288305 0.029765773156780664 0.2363341834668209 18.689833309656706 0.011847732038910931 0.007998017175807991 1.4947564490243548e-07 6.825429564169964 -0.04522938763779716 GLPPS(ph)VER ddPTM_KYSE-520_SHP099_60min_R1 1 GLPPSVER 8 0 Q96E39 Q96E39 RBMXL1 RNA binding motif protein, X-linked-like-1 1 GLPPS(1)VER 116.52 0.0024081999999999997 0.0 157390.0 169100.0 138450.0 113580.0 133960.0 150510.0 123640.0 127130.0 191250.0 139730.0 True False 148659.26295081357 160976.1821757254 147374.7085278322 124374.60905092793 144501.88987186295 149570.61126115016 136138.7378101168 126689.01570236504 156523.82102016394 138492.10090829493 1.0734132992122851 1.162349196235522 1.0641380090364796 0.8980628370515142 1.043394452998785 1.0799938067239738 0.9830072395267045 0.9147743074982628 1.1302003507319818 1.0 17.07944416691765 -5.002064793450992 24.471013845717327 1.0050642165246293 1.1167218797840743 0.29955628919120125 0.06842068924164436 71.7496427638936 850404.9794737935 0.017642655002734427 0.03580099552673995 9.952569214716261e-06 5.002064793450992 0.11165766325944504 GLPRPDS(ph)PIPLQPVLPGTQASEDTESGKPPPASQEAELLLPK ddPTM_KYSE-520_SHP099_60min_R1 1 GLPRPDSPIPLQPVLPGTQASEDTESGKPPPASQEAELLLPK 42 2 P52746 P52746 ZNF142 Zinc finger protein 142 1 GLPRPDS(1)PIPLQPVLPGTQASEDTESGKPPPASQEAELLLPK 82.625 0.0013020999999999998 414430000.0 20861.0 38242.0 23363.0 23973.0 29369.0 25754.0 26045.0 25638.0 37323.0 33794.0 True False 19703.79874462749 36404.79691758773 24869.016362121693 26251.386712254734 31680.17321324829 25593.259733038773 28677.882774704693 25549.067761954193 30546.084036264452 33494.61145133414 0.5882677210110661 1.0868851836207127 0.7424781266161284 0.7837495517867578 0.9458289510023984 0.7641008097742646 0.8561939229052442 0.7627814342338501 0.9119700964630165 1.0 15.031641395784337 -8.001037220278084 5.972101951870199 0.9999180949589722 0.8259798949055243 0.17987732506700504 0.12508602699255794 0.20863461649530962 34.85910491306845 0.11062016438046697 0.028715232469273197 9.976145617401213e-09 8.001037220278084 -0.17393820005344796 GLPS(ph)PYNMSSAPGSR ddPTM_KYSE-520_SHP099_60min_R1 3 GLPSPYNMSSAPGSR 15 0 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 GLPS(0.999)PYNMS(0.001)SAPGSR;GLPS(1)PYNMSSAPGSR;GLPS(0.793)PY(0.197)NMS(0.009)S(0.002)APGSR 142.32 1.0407e-05 1878350000.0 369730.0 376870.0 303438.0 296005.0 282750.0 350860.0 296675.0 327229.0 399470.0 365050.0 True False 349220.3398615181 358764.59950659686 322998.09899796627 324137.2262028513 305000.8163725681 348670.1525950914 326665.8042689776 326093.91897482314 326936.3178192153 361815.941004602 0.9651878214428267 0.9915665918711792 0.892713842571845 0.8958622035913241 0.8429723011255845 0.9636671939522327 0.9028507792165594 0.9012701819311921 0.9035984343626721 1.0 18.464896446524357 -4.760559022882016 24.999992789925944 0.9076938352506014 0.9783772236283798 0.2856538979653165 0.04078740554095333 24.5340245317934 696603.2879533819 0.010049055432152025 0.023629793155460606 1.735565374468889e-05 4.760559022882016 0.07068338837777832 GLPSPYNMSS(ph)APGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 7 GLPSPYNMSSAPGSR 15 0 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 2 GLPSPYNMS(0.005)S(0.995)APGS(1)R;GLPSPYNMS(0.004)S(0.996)APGS(1)R;GLPSPYNMS(0.137)S(0.863)APGS(1)R;GLPSPYNMS(0.137)S(0.863)APGS(1)R;GLPSPYNMS(0.005)S(0.995)APGS(1)R;GLPSPYNMS(0.007)S(0.993)APGS(1)R;GLPSPYNMS(0.023)S(0.977)APGS(1)R 171.25 3.0692e-08 21388410000.0 20323490.0 16949340.0 15997460.0 15112990.0 14350320.0 15743500.0 13844700.0 16257520.0 20451220.0 15681260.0 True False 19196105.495827105 16135068.264921987 17028681.868441015 16549324.025713878 15479608.541848266 15645238.976745194 15244257.387251059 16201126.457653707 16737793.981301924 15542336.236235682 1.2350849450208752 1.0381366108464698 1.0956320600464196 1.0647899887232195 0.9959640755782151 1.0066208026222982 0.9808214901251668 1.0423868208359892 1.0769162194727926 1.0 23.889700042030736 -1.0000013216013803 0.9079722767318805 1.0239600378730915 107.55237842963362 0.735216878391703 0.03617977963320062 507.8971832162304 1.0771060404741442 0.012500346255933627 112156.74135108526 0.0999996956904993 1.0000013216013803 106.52841839176052 GLPSPYNMSS(ph)APGSR ddPTM_KYSE-520_SHP099_60min_R1 5 GLPSPYNMSSAPGSR 15 0 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 GLPSPY(0.092)NMS(0.201)S(0.671)APGS(0.036)R;GLPSPY(0.004)NMS(0.165)S(0.776)APGS(0.055)R;GLPSPYNMS(0.23)S(0.72)APGS(0.05)R;GLPSPYNMS(0.122)S(0.878)APGSR;GLPSPYNMS(0.009)S(0.991)APGSR 141.85 1.0707000000000001e-05 9561190000.0 4017600.0 3999470.0 3346250.0 2640470.0 3131640.0 3405820.0 2935100.0 3018380.0 4143140.0 3292930.0 True False 3794735.7191129583 3807329.4578731437 3561954.6291893036 2891419.4749137475 3378082.2514057956 3384563.01405522 3231808.5518155457 3007909.9442751845 3390850.2160600345 3263757.202060772 1.1626893436548897 1.1665480065334377 1.0913663022911895 0.8859174552224882 1.0350286624485538 1.0370143379287435 0.9902110824221073 0.9216095922748044 1.0389407073292751 1.0 21.638102305429015 -5.025313579592281 5.554895050337635 0.9874794432873433 1.1579708944685132 0.7020998335395748 0.04729227836394935 0.09217064253767727 8.84482903785951 0.012842959658748578 0.024197673185530233 9.43379469115311e-06 5.025313579592281 0.17049145118116993 GLPSPYNMSSAPGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 GLPSPYNMSSAPGSR 15 0 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 GLPSPYNMSSAPGS(1)R;GLPSPYNMSSAPGS(1)R 103.88 0.014616 1791810000.0 1870260.0 1527930.0 1948850.0 1425730.0 1320330.0 1452100.0 1288190.0 1485600.0 2151980.0 1505670.0 True False 1766512.9495291219 1454525.9493303136 2074475.989270251 1561230.9505386457 1424232.4593499312 1443036.9052708533 1418412.816722858 1480446.8003416462 1761234.6790011611 1492330.9351935342 1.1837273542145195 0.9746671566127403 1.3900911254655595 1.0461693942812866 0.9543677114521709 0.9669684325639955 0.9504680116672043 0.9920365285127948 1.1801904238973333 1.0 20.509136068470223 -5.50478095611297 24.954391833102637 1.001913775024643 1.171365390431239 0.3298316585854868 0.11166746090845044 860.229858342232 1186140.2665944106 0.031157485823743666 0.0452129580356427 3.1276564566695763e-06 5.50478095611297 0.16945161540659615 GLPSTAS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 1 GLPSTASGR 9 0 P48730-2;H7BYT1;P48730 P48730-2 CSNK1D Casein kinase I isoform delta 1 GLPS(0.109)T(0.109)AS(0.782)GR 67.98100000000001 0.033462 308710000.0 1136800.0 1124100.0 1336900.0 1109400.0 1143000.0 1138000.0 1026900.0 1060700.0 1300900.0 1266900.0 True False 1073739.4378453821 1070096.5486915011 1423078.713115629 1214837.0424467279 1232947.5972196122 1130897.3198803347 1130709.0735782029 1057020.6792692405 1064689.3530202927 1255676.2516332858 0.8551085014538944 0.8522073641988553 1.133316578429033 0.9674763227118157 0.9818992718990186 0.9006281025139653 0.9004781862422457 0.8417939559614593 0.8479011621311049 1.0 20.260033114469447 -6.3835836104708354 4.364280670858123 0.8862390344886901 0.9622291096585517 0.10610385191555893 0.08361531334955699 0.4837320078135229 15.01338963502566 0.031863809583919066 0.02778467977367474 4.134437104095258e-07 6.3835836104708354 0.07599007516986156 GLPSTSSKEDVT(ph)PPLS(ph)PDDLK ddPTM_KYSE-520_SHP099_60min_R1 9 GLPSTSSKEDVTPPLSPDDLK 21 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 GLPSTSSKEDVT(1)PPLS(1)PDDLK;GLPSTSSKEDVT(0.999)PPLS(1)PDDLK;GLPS(0.021)T(0.022)S(0.023)S(0.025)KEDVT(0.916)PPLS(0.992)PDDLK;GLPSTSSKEDVT(1)PPLS(1)PDDLK;GLPSTSSKEDVT(0.999)PPLS(1)PDDLK;GLPS(0.001)T(0.001)S(0.001)S(0.001)KEDVT(0.995)PPLS(1)PDDLK;GLPSTSSKEDVT(1)PPLS(1)PDDLK;GLPS(0.016)T(0.016)S(0.017)S(0.019)KEDVT(0.934)PPLS(0.999)PDDLK;GLPSTSSKEDVT(1)PPLS(1)PDDLK 178.5 9.931799999999999e-10 12235590000.0 8173810.0 7703470.0 7544970.0 6949980.0 7199370.0 7478690.0 6867650.0 6754090.0 9904300.0 7102090.0 True False 7720392.465213734 7333383.738055786 8031330.838578825 7610504.009612325 7765919.460188072 7432012.7216308005 7561899.083804974 6730661.638206457 8105928.787085019 7039171.007942417 1.0967758073362166 1.041796502710533 1.1409483914394092 1.081164813445399 1.103243471628357 1.055807951425691 1.0742598915799537 0.9561724854549117 1.1515459388525953 1.0 22.74697410427309 -6.592914671035623 2.0223616735696925 1.0400075528020358 1.0916815257510457 0.15737275522419059 0.05233229287366429 0.5984950872546306 4.9696291495547875 0.02279104930073289 0.016581223770076203 2.5532028995437026e-07 6.592914671035623 0.05167397294900988 GLPTGDS(ph)PLGPMTHR ddPTM_KYSE-520_SHP099_60min_R1 1 GLPTGDSPLGPMTHR 15 0 J3QQZ9;Q9NVS9-3;Q9NVS9;Q9NVS9-4 J3QQZ9 PNPO Pyridoxine-5-phosphate oxidase 1 GLPTGDS(1)PLGPMTHR 248.24 4.924100000000001e-19 871950000.0 576050.0 550600.0 516240.0 441680.0 483090.0 468610.0 519720.0 520740.0 677730.0 563200.0 True False 544095.3581727945 524148.34953255136 549517.6564132046 483657.1344040653 521106.4345938954 465685.23116794595 572258.3695784035 518933.67448163027 554671.3161829837 558210.4861629702 0.9747136101164986 0.9389797621600495 0.9844273263128424 0.8664422227691027 0.9335303572956488 0.8342466555384426 1.0251659253340004 0.9296379902295977 0.9936597930928993 1.0 19.090449700584287 -7.780170970972442 7.4962307044676475 0.9976201929705054 0.9347773191014611 0.17971185588005156 0.052030961315959766 0.2981746537129126 74.54626609720569 0.04537504575084065 0.012916507642395403 1.6589336977938053e-08 7.780170970972442 -0.0628428738690443 GLPVTCEVAPHHLFLSHDDLER ddPTM_KYSE-520_SHP099_60min_R1 1 GLPVTCEVAPHHLFLSHDDLER 22 0 F8VPD4;P27708 F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 0 177.61 2.9247e-10 262250000.0 113080.0 102750.0 80747.0 88162.0 107310.0 110450.0 82938.0 70104.0 93313.0 77482.0 False True 106807.22698060861 97813.7357691056 85952.08081976797 96540.88997312808 115754.68648962078 109760.6405806527 91322.1824368769 69860.82558639655 76369.71142930476 76795.56976008389 1.390799330147348 1.2736898244870674 1.1192322823867291 1.2571153554134737 1.5073094301044787 1.429257454870829 1.1891595143076017 0.9096986428337976 0.9944546497654807 1.0 16.228735465632447 -7.076396984954906 4.0384777129630764 0.9676171854545207 1.3221388211809855 0.7129066695669187 0.10233279048914323 0.142904255025414 4.37243256219992 0.05717199814141571 0.03237682934236867 8.386929937684217e-08 7.076396984954906 0.3545216357264648 GLQLT(ph)PGIGGMQQHFFDDEDR ddPTM_KYSE-520_SHP099_60min_R1 11 GLQLTPGIGGMQQHFFDDEDR 21 0 P12270 P12270 TPR Nucleoprotein TPR 1 GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR;GLQLT(1)PGIGGMQQHFFDDEDR 239.97 2.3903e-26 11535700000.0 623598.0 722777.0 676203.0 965999.0 1406209.0 5837324.0 5683340.0 9215070.0 8321670.0 8863660.0 True False 589005.7758282067 688053.7080096048 719792.1273430538 1057807.2545218114 1516869.648065261 5800891.0956706 6257867.471253233 9183105.07298351 6810664.500229367 8785134.868223129 0.067045729480911 0.07832022141155469 0.0819329626852545 0.12040876667107585 0.1726632169930547 0.660307574406525 0.712324576130149 1.045300409240146 0.7752487130122891 1.0 23.066633003790397 -6.412363801778775 1.4411635040390043 0.9235305663547461 0.07022012274891888 0.9523007794519436 0.08393473172774756 0.07415327836201072 0.31027645578287555 0.038223533091284005 0.030590576964367525 3.8693338100898254e-07 6.412363801778775 -0.8533104436058272 down GLQPS(ph)TPPPKPPR ddPTM_KYSE-520_SHP099_60min_R1 1 GLQPSTPPPKPPR 13 1 A0A1B0GTL5 A0A1B0GTL5 1 GLQPS(0.78)T(0.22)PPPKPPR 54.005 0.045025 554520000.0 1191500.0 1350000.0 1073600.0 1017800.0 1083300.0 1350800.0 1049800.0 1206800.0 1426000.0 1466200.0 True False 1125405.1198036375 1285143.9736086866 1142805.9738207355 1114531.4059872704 1168549.546866148 1342369.1561461822 1155924.0290606655 1202613.8924692383 1167074.346534659 1453210.608686339 0.7744267163181334 0.8843480538381289 0.7864007921424406 0.7669441712889606 0.8041157557489093 0.9237265046940757 0.795427739208144 0.8275565050797192 0.8031006239279115 1.0 20.470812372149545 GLQPST(ph)PPPKPPR ddPTM_KYSE-520_SHP099_60min_R1 1 GLQPSTPPPKPPR 13 1 A0A1B0GTL5 A0A1B0GTL5 1 GLQPS(0.16)T(0.84)PPPKPPR 76.15100000000001 0.041351 1477000000.0 2008700.0 2281800.0 1577600.0 1221200.0 1384100.0 2023700.0 1496600.0 1931300.0 2387200.0 2026700.0 True False 1897273.4067558253 2172178.902948375 1679294.6202492465 1337262.4808328317 1493020.7955482635 2011069.337646601 1647890.9334084487 1924600.7710688096 1953744.6564148269 2008745.01474874 0.9445068402537602 1.081361191689169 0.8359919292490678 0.6657203731754379 0.7432604858188111 1.0011571020118508 0.8203584433610017 0.9581110379554791 0.9726195420871808 1.0 20.937863012785865 -7.409199458307971 5.250775544392993 0.9800905343301558 0.8696073623932523 0.15771924824522943 0.11374161959027819 0.49472114285288005 19.310570039510583 0.07286656775291042 0.03351239554202828 3.897629392456089e-08 7.409199458307971 -0.11048317193690349 GLQVDLQS(ph)DGAAAEDIVASEQSLGQK ddPTM_KYSE-520_SHP099_60min_R1 4 GLQVDLQSDGAAAEDIVASEQSLGQK 26 0 A0A3B3ITP6;A0A3B3IS57;A0A3B3IT92;P33991;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 GLQVDLQS(1)DGAAAEDIVASEQSLGQK;GLQVDLQS(1)DGAAAEDIVASEQSLGQK;GLQVDLQS(1)DGAAAEDIVASEQSLGQK;GLQVDLQS(1)DGAAAEDIVASEQSLGQK 239.53 3.7183999999999997e-29 382469000.0 310121.0 408097.0 276024.0 228300.0 231761.0 364178.0 232583.0 313576.0 406457.0 336068.0 True False 292917.96991911356 388491.4075539141 293816.9486940149 249997.5633591019 249999.27216029278 361905.03001703 256094.75943133602 312488.27804518887 332654.6547471517 333090.6989769474 0.8793940233659477 1.1663231928934794 0.8820929242288733 0.750539009726008 0.7505441398638236 1.0865059610748147 0.7688439221446405 0.9381477147364466 0.9986909144232038 1.0 18.34555554406848 -9.60834844472484 14.219116558756987 0.9999975197784493 0.9119483021069026 0.03639931387848849 0.1333873692896145 0.0 0.0 0.1322657432732418 0.03207915471567086 2.4640615691148103e-10 9.60834844472484 -0.08804921767154672 GLRDS(ph)HS(ph)S(ph)EEDEASSQTDLSQTISK ddPTM_KYSE-520_SHP099_60min_R1 2 GLRDSHSSEEDEASSQTDLSQTISK 25 1 H0YDU3;A0A0A0MSK5;J3KN66;Q5JTV8-2;Q5JTV8;Q5JTV8-3 H0YDU3 TOR1AIP1 Torsin-1A-interacting protein 1 3 GLRDS(1)HS(0.995)S(0.995)EEDEAS(0.004)S(0.004)QT(0.001)DLSQTISK;GLRDS(0.997)HS(0.998)S(0.998)EEDEAS(0.003)S(0.002)QT(0.002)DLSQTISK 96.492 0.022129 897310000.0 498930.0 598210.0 458070.0 621040.0 608230.0 638630.0 705460.0 653290.0 780920.0 571560.0 True False 471253.35830770334 569471.0936684844 487597.92513791367 680063.4548775156 656094.2406446934 634644.0732822297 776774.7814261164 651023.8894690323 639124.6133911969 566496.4230669519 0.83187349313944 1.005250996264774 0.8607255143785549 1.2004726370481278 1.1581613121097365 1.1202966999267774 1.3711909727880356 1.1492109446066006 1.1282059115767116 1.0 19.111707321144806 -5.264458157586349 24.999085027790414 1.1742281464681168 0.9098800934079527 0.6040025084634839 0.09661575878261831 167.802083056852 1389605.6245081185 0.026266345157493983 0.040909565865758966 5.439285343811281e-06 5.264458157586349 -0.26434805306016407 GLS(ph)ASLPDLDSENWIEVK ddPTM_KYSE-520_SHP099_60min_R1 2 GLSASLPDLDSENWIEVK 18 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YC73 Q6PKG0 LARP1 La-related protein 1 1 GLS(0.557)AS(0.436)LPDLDS(0.007)ENWIEVK;GLS(0.587)AS(0.41)LPDLDS(0.003)ENWIEVK 103.26 0.00034111 2332500000.0 309480.0 334560.0 273520.0 215757.0 253640.0 332040.0 238890.0 302390.0 394140.0 327150.0 True False 292312.5274669154 318487.23541520175 291151.53684747376 236262.48041029257 273600.02498581127 329967.6151960157 263039.3325417239 301341.0796683568 322574.11146084935 324251.7055188486 0.9014988124709289 0.9822222365972666 0.8979182896866806 0.7286391293832647 0.843789008134938 1.0176280018882886 0.8112195805441448 0.9293430829798364 0.9948262598794512 1.0 18.306754637308895 -7.627309184138152 3.7518023603736004 0.9975706917811578 0.88445642977147 0.2562280158236292 0.077000312862203 0.3500980058706243 9.027167135152363 0.0643423877892444 0.021230571138157888 2.3587983529804286e-08 7.627309184138152 -0.11311426200968777 GLS(ph)GEEEDDEPDCCNDER ddPTM_KYSE-520_SHP099_60min_R1 2 GLSGEEEDDEPDCCNDER 18 0 Q6P158-2;Q6P158;A0A087WW12;A0A087WZ11;Q6P158-3 Q6P158-2 DHX57 Putative ATP-dependent RNA helicase DHX57 1 GLS(1)GEEEDDEPDCCNDER;GLS(1)GEEEDDEPDCCNDER 368.53 5.2978e-91 698710000.0 824150.0 762640.0 645440.0 628330.0 725200.0 719920.0 706280.0 725130.0 874730.0 717840.0 True False 778432.7565977058 726001.6296540214 687046.0951405137 688046.2942856969 782269.1141764339 715426.712239235 777677.6750285439 722614.6932766136 715901.0821488515 711480.4960710696 1.094102734925777 1.0204097423093679 0.9656569630994984 0.9670627629080758 1.0994948118694363 1.005546485377965 1.0930414527496224 1.0156493358103689 1.0062132217287658 1.0 19.440464682900135 -4.261220309107382 21.16427912013656 1.0208023732948834 1.0941028433924045 0.21587694984196248 0.04271414144634178 3.564614035650997 342074.9879630227 0.0109492635012687 0.061538439681653026 5.479989052593928e-05 4.261220309107382 0.07330047009752105 GLS(ph)GGEERPETEPLLSFVASVSPADR ddPTM_KYSE-520_SHP099_60min_R1 1 GLSGGEERPETEPLLSFVASVSPADR 26 1 F5H0R1;Q9H6E5 F5H0R1 TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase 1 GLS(0.997)GGEERPET(0.003)EPLLS(0.001)FVASVSPADR 51.479 0.044375 0.0 7204.9 6116.3 4273.8 5645.8 6367.5 6969.0 5765.7 7671.0 7827.8 5494.1 True False 6805.229834387933 5822.463767246532 4549.2959863217775 6182.375134528333 6868.58602388091 6925.503885980707 6348.553223809365 7644.391091424861 6406.46884277981 5445.426548345119 1.2497147420813273 1.0692392442637935 0.8354342760723348 1.1353334912592246 1.2613494944612362 1.271801910189274 1.1658504926007511 1.4038186032916031 1.1764861367429067 1.0 12.410829346474754 -5.524038854725091 11.607950212694764 1.2307808059353824 1.0419389645652033 0.22028008064823523 0.133993823613727 0.11869434360551916 629.3230183726736 0.03866915744310041 0.051557201313085436 2.991996941705272e-06 5.524038854725091 -0.18884184137017912 GLS(ph)GPCRPPPPPQAR ddPTM_KYSE-520_SHP099_60min_R1 6 GLSGPCRPPPPPQAR 15 1 Q9UEE5 Q9UEE5 STK17A Serine/threonine-protein kinase 17A 1 GLS(1)GPCRPPPPPQAR;GLS(1)GPCRPPPPPQAR;GLS(1)GPCRPPPPPQAR;GLS(1)GPCRPPPPPQAR;GLS(1)GPCRPPPPPQAR;GLS(1)GPCRPPPPPQAR 153.75 2.0639e-06 15696990000.0 2136810.0 1931740.0 1989130.0 1711780.0 2021120.0 1986370.0 1900240.0 1952950.0 2301220.0 1856600.0 True False 2018276.8896748684 1838936.3107991468 2117352.502520527 1874467.0565345755 2180170.6454002657 1973972.3280234614 2092334.8037552242 1946175.6722719546 1883376.4570354044 1840151.9684129443 1.0967990276452817 0.9993393710765932 1.1506400225991427 1.018647964250054 1.1847774981761825 1.0727224500517376 1.1370445700524274 1.057616819523037 1.0234896298590705 1.0 20.811393485075143 -7.684882496468762 2.7687815470841306 1.0056986153532967 1.092749695682895 0.2734807525675278 0.05362091791101212 0.3511344705460476 5.003435267563411 0.045312222583036375 0.013497477705185739 2.065939044550751e-08 7.684882496468762 0.0870510803295983 GLS(ph)PADVAQEHLK ddPTM_KYSE-520_SHP099_60min_R1 1 GLSPADVAQEHLK 13 0 P10070 P10070 GLI2 Zinc finger protein GLI2 1 GLS(1)PADVAQEHLK 171.87 2.2055e-05 0.0 450260.0 398970.0 392120.0 397600.0 431940.0 403420.0 399240.0 435390.0 456400.0 391310.0 True False 425283.1802289431 379802.8823338205 417396.68261418276 435387.7844572009 465931.22059758496 400902.1061389496 439599.0754069148 433879.73371078965 373529.2649077274 387843.2978345737 1.096533529400677 0.9792689069383309 1.0761992922002597 1.12258684599703 1.2013388479290366 1.0336703209190063 1.1334450739804105 1.1186985468957409 0.9630932569757809 1.0 18.565114345659605 -7.763243407247605 24.99996840906802 0.9815465824614507 1.0943911166931743 0.39015987984747014 0.05683802773786789 52.38844791048744 725893.9934572406 0.048846832187130554 0.015120485724866236 1.7248708897142683e-08 7.763243407247605 0.11284453423172369 GLS(ph)PVKEPK ddPTM_KYSE-520_SHP099_60min_R1 2 GLSPVKEPK 9 1 Q8TC05-4;Q8TC05;F5H529 Q8TC05-4 MDM1 Nuclear protein MDM1 1 GLS(1)PVKEPK;GLS(1)PVKEPK 125.28 0.00043752 1785720000.0 2676200.0 2477000.0 2239100.0 2287700.0 2334200.0 2559800.0 2231500.0 2594700.0 3010400.0 2720900.0 True False 2527745.851127561 2358001.201947198 2383435.968686668 2505122.3201779155 2517888.260218738 2543823.3386904043 2457081.7973412764 2585699.591307532 2463787.246008372 2696794.9428281686 0.9373148143316662 0.8743717086158309 0.8838031883088314 0.9289257705114045 0.933659515683529 0.9432765162421505 0.91111183810086 0.9588046722587927 0.9135982891693507 1.0 21.36281439634379 -13.999999979428601 0.10449045252908845 1.260043568745128 0.8691437139034428 0.5386890107718062 0.023336736117341744 133.45473705323627 0.9376188692236841 7.4604827982890205 0.34633192891196957 1.0000000473673973e-14 13.999999979428601 -0.3908998548416851 GLS(ph)SSEKDNIER ddPTM_KYSE-520_SHP099_60min_R1 1 GLSSSEKDNIER 12 1 Q8IYH5;Q8IYH5-4;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 GLS(0.333)S(0.333)S(0.333)EKDNIER 98.25299999999999 0.0026330999999999998 450610000.0 317390.0 281020.0 342790.0 263470.0 328910.0 294180.0 302070.0 433180.0 536520.0 319560.0 True False 299783.74399872095 267519.3773803806 364886.79188339243 288510.10958485573 354793.3457580957 292343.9134994698 332606.18351910333 431677.3996849719 439101.4925685665 316728.9470139181 0.9464993548112528 0.8446319160358429 1.1520475009420537 0.9109054044630082 1.1201797281336112 0.9230097730430155 1.0501287825280068 1.3629237357518909 1.3863636295588448 1.0 18.272889200991397 -7.13425051741678 4.912302508724955 1.2787718171660665 0.9873750648551141 0.44504138927268966 0.13187904507669854 0.18338786372644142 6.5094855780070295 0.06133743916849715 0.0346501422992207 7.340902950674571e-08 7.13425051741678 -0.2913967523109524 GLSAS(ph)LPDLDSENWIEVK ddPTM_KYSE-520_SHP099_60min_R1 15 GLSASLPDLDSENWIEVK 18 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YC73 Q6PKG0 LARP1 La-related protein 1 1 GLSAS(1)LPDLDSENWIEVK;GLS(0.04)AS(0.96)LPDLDSENWIEVK;GLS(0.004)AS(0.996)LPDLDSENWIEVK;GLS(0.002)AS(0.998)LPDLDSENWIEVK;GLS(0.02)AS(0.979)LPDLDS(0.001)ENWIEVK;GLSAS(1)LPDLDSENWIEVK;GLS(0.001)AS(0.999)LPDLDSENWIEVK;GLS(0.006)AS(0.994)LPDLDSENWIEVK;GLSAS(1)LPDLDSENWIEVK;GLS(0.019)AS(0.981)LPDLDSENWIEVK;GLSAS(1)LPDLDSENWIEVK;GLSAS(1)LPDLDSENWIEVK;GLS(0.016)AS(0.984)LPDLDSENWIEVK;GLS(0.002)AS(0.998)LPDLDSENWIEVK;GLS(0.029)AS(0.971)LPDLDSENWIEVK 369.33 1.9014999999999996e-72 22714749000.0 15167765.0 15999569.0 13131692.0 10846752.0 11590176.0 14801900.0 11498837.0 14472372.0 18376852.0 14716673.0 True False 14326378.839260098 15230925.689397305 13978181.877770066 11877624.048885105 12502256.91211937 14709515.851613985 12661251.661794478 14422170.719409034 15040078.91954007 14586294.726618323 0.9821808147833522 1.0441942916183233 0.9583092992260385 0.814300291575063 0.8571235633477348 1.00844773311558 0.8680238469807646 0.9887480672586587 1.0311103128948602 1.0 23.798110114401613 -9.810422112393667 8.109335888032286 0.999999999632248 0.9469547575153908 0.03701255346743004 0.07438581277816012 0.0 0.0 0.07714003520229126 0.018709206792506896 1.5473119783921876e-10 9.810422112393667 -0.05304524211685713 GLSAS(ph)LPDLDSENWIEVKK ddPTM_KYSE-520_SHP099_60min_R1 1 GLSASLPDLDSENWIEVKK 19 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YC73 Q6PKG0 LARP1 La-related protein 1 1 GLS(0.005)AS(0.995)LPDLDSENWIEVKK 126.97 1.1517e-05 501000000.0 240220.0 277090.0 269040.0 216970.0 241640.0 198750.0 154340.0 166990.0 349680.0 183420.0 True False 226894.51773330208 263778.1804794305 286382.74887921975 237590.7635655908 260655.69325647168 197509.5275274309 169942.1934132434 166410.7506657588 286186.9267154559 181795.04149860056 1.2480786927021257 1.4509646594594332 1.5753056107496985 1.3069155330478017 1.4337887937305385 1.0864406746151616 0.9348010375439838 0.9153756301270726 1.574228451757079 1.0 17.47195332466775 -6.264135251829011 23.83448777617022 1.08641960110316 1.409908103490064 0.38172774117887465 0.19080842503334125 129.09983800850037 1141378.1463489041 0.06532182949858101 0.060250451580136734 5.44333105412344e-07 6.264135251829011 0.3234885023869041 GLSEDTTEETLKESFDGSVR ddPTM_KYSE-520_SHP099_60min_R1 4 GLSEDTTEETLKESFDGSVR 20 1 P19338;H7BY16 P19338 NCL Nucleolin 0 ;;; 214.24 1.0873e-18 4448200000.0 3720760.0 3147210.0 2074740.0 2975690.0 2822710.0 2335850.0 2509610.0 2609270.0 2476090.0 1877180.0 False True 3514362.0256488253 2996013.307541481 2208481.060101372 3258498.6829261812 3044841.2179770544 2321271.0937104397 2763305.870233312 2600219.0513781966 2026494.4731493725 1860549.645623939 1.8888837682534814 1.6102839903187651 1.1870046388150817 1.751363469709209 1.6365277998029237 1.2476265275533653 1.4852094254688009 1.3975542429055732 1.089191292431105 1.0 20.827297456181235 -1.0000005641805099 0.05411564431550595 0.12430596740913571 3.9938498398471545 0.5513692104890173 0.18783762372831367 346.93096949863263 1.414602860847191 22.404348193449927 109.17557229039434 0.0999998700927212 1.0000005641805099 3.869543872438019 GLSHS(ph)PWAVK ddPTM_KYSE-520_SHP099_60min_R1 6 GLSHSPWAVK 10 0 Q96KB5;Q96KB5-2;E5RFX4 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 GLS(0.016)HS(0.984)PWAVK;GLS(0.003)HS(0.997)PWAVK;GLS(0.01)HS(0.99)PWAVK;GLS(0.003)HS(0.997)PWAVK;GLSHS(1)PWAVK;GLS(0.007)HS(0.993)PWAVK 114.72 0.00040306 3138180000.0 9176440.0 8430020.0 8087000.0 8036820.0 7687280.0 7738870.0 7780840.0 8527270.0 9143020.0 8270780.0 True False 8667404.580420386 8025029.185482011 8608300.959657485 8800636.956441954 8292225.201359908 7690568.841741925 8567403.240880538 8497690.890649782 7482878.044777925 8197507.323769461 1.057321968507233 0.978959684758398 1.0501120181615315 1.0735747598448202 1.0115544730671728 0.9381594353008238 1.0451229748875646 1.036618883646485 0.9128235876143227 1.0 22.966753854867324 -5.996580012604673 24.91714065131989 0.9905350220767606 1.0371316445822663 0.24458440445313268 0.0438903618931036 165.78741852522793 1207867.0277590118 0.013778217902869767 0.015548463718443324 1.0079058998768475e-06 5.996580012604673 0.04659662250550567 GLSHS(ph)PWAVKK ddPTM_KYSE-520_SHP099_60min_R1 1 GLSHSPWAVKK 11 1 Q96KB5;Q96KB5-2;E5RFX4 Q96KB5 PBK Lymphokine-activated killer T-cell-originated protein kinase 1 GLS(0.006)HS(0.994)PWAVKK 108.17 0.00032368 1783200000.0 2719100.0 2807700.0 2974400.0 2483900.0 2139600.0 2398100.0 2307500.0 2030500.0 3445700.0 2221300.0 True False 2568266.102608536 2672813.8775563813 3166134.5832082643 2719969.1091882354 2307974.34734128 2383132.5683699693 2540764.619029797 2023456.669422262 2820047.739028382 2201621.010145249 1.166534154050019 1.2140208806328778 1.4380924639701649 1.2354392952530868 1.0483068324229947 1.0824445067467563 1.1540426836961253 0.9190758355311878 1.2808960879430986 1.0 21.07013471223106 -5.674508773505185 5.244834851946382 1.0807724681264144 1.2770222308499735 0.3984535648601504 0.11034162741579173 0.204352826398315 9.329019692254244 0.03211261715130683 0.04145148886743277 2.115880940327795e-06 5.674508773505185 0.1962497627235591 GLSLVDKENT(ph)PPALSGTR ddPTM_KYSE-520_SHP099_60min_R1 4 GLSLVDKENTPPALSGTR 18 1 P31350;P31350-2;A0A286YFD6 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 GLSLVDKENT(1)PPALSGTR;GLSLVDKENT(1)PPALSGTR;GLSLVDKENT(1)PPALSGTR;GLSLVDKENT(1)PPALSGTR 126.86 0.00010473 2110810000.0 2147740.0 2426800.0 1836390.0 1421090.0 1553250.0 2178410.0 1521680.0 1898080.0 2211420.0 2251890.0 True False 2028600.5807864561 2310212.885298936 1954766.6377278871 1556149.9663337108 1675481.938216414 2164813.7351498385 1675506.264565661 1891496.0034952003 1809881.873361623 2231940.006543909 0.9088956579651449 1.0350694366898463 0.8758150452057999 0.6972185460949559 0.7506841282937737 0.9699246972601142 0.7506950274887233 0.8474672249027535 0.8109007715508311 1.0 21.089866818075137 -4.968171169268355 8.082072024307339 0.8220423683509434 0.9687687920768855 0.25193811628334195 0.09384086516035185 0.27061292100731543 58.05308111944808 0.02384750005312226 0.04948354705378326 1.0760410280494273e-05 4.968171169268355 0.14672642372594213 GLSPAMS(ph)PALQR ddPTM_KYSE-520_SHP099_60min_R1 1 GLSPAMSPALQR 12 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 GLS(0.045)PAMS(0.955)PALQR 167.03 2.5718e-06 0.0 375600.0 429280.0 322100.0 299240.0 298230.0 353930.0 278070.0 316510.0 393190.0 382610.0 True False 354764.719259963 408656.7444375833 342863.08137822174 327679.67963021336 321699.00430341694 351720.9915863326 306180.0293016756 315412.1006839892 321796.6075132983 379220.3730660756 0.9355107068526315 1.077623391205247 0.9041262171810612 0.864087751881195 0.8483167760803924 0.9274844300758296 0.8073934077595736 0.8317382796019547 0.848574154683478 1.0 18.532676947459525 -4.92981335172926 6.286710177004123 0.8677994257026839 1.0055428551388579 0.4162478450957403 0.06075096709761398 0.16585358106545509 11.400246073903096 0.015055727515896037 0.03186106419080355 1.175402603324654e-05 4.92981335172926 0.13774342943617401 GLSQMTTSADTDVDTSKDKTESVTSGPMS(ph)PEGS(ph)PSKS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 GLSQMTTSADTDVDTSKDKTESVTSGPMSPEGSPSKSPSK 40 3 P35612 P35612 ADD2 Beta-adducin 3 GLSQMTTSADTDVDT(0.006)S(0.006)KDKT(0.04)ES(0.219)VT(0.261)S(0.06)GPMS(0.407)PEGS(0.998)PS(0.015)KS(0.95)PS(0.037)K 105.29 0.00011465 965110000.0 350930.0 400030.0 390750.0 327140.0 343920.0 275980.0 268140.0 327020.0 366250.0 332590.0 True False 331463.2133383887 380811.9583427281 415938.3702221052 358231.2872417727 370984.54736287775 274257.50645041664 295246.207994215 325885.64394704165 299748.23241116386 329643.5113511049 1.0055202117579243 1.155223583142589 1.2617823676167774 1.0867233083809098 1.1254113446441854 0.8319821170643449 0.8956530246389315 0.9886002081804647 0.909310276372771 1.0 18.330547158303126 -6.2422234997505335 22.961580395205548 0.9225556517235521 1.1337618335044155 0.6485420116823353 0.07418921889426765 178.96926945877613 213854.90332351357 0.025103444602419426 0.025050683179013863 5.725013304087149e-07 6.2422234997505335 0.21120618178086337 GLSTS(ph)LPDLDSEPWIEVK ddPTM_KYSE-520_SHP099_60min_R1 3 GLSTSLPDLDSEPWIEVK 18 0 A0A3B3ISF0;H0Y9K3;D6R9W6;D6RJB0;Q659C4-4;Q659C4-9;Q659C4-2;Q659C4 A0A3B3ISF0 LARP1B La-related protein 1B 1 GLS(0.003)T(0.02)S(0.977)LPDLDSEPWIEVK;GLST(0.048)S(0.952)LPDLDSEPWIEVK;GLST(0.048)S(0.952)LPDLDSEPWIEVK 354.25 1.9955999999999997e-60 575074000.0 890640.0 970980.0 771140.0 681550.0 686850.0 931730.0 697850.0 851950.0 1082190.0 854330.0 True False 841234.4237531773 924332.6633293064 820848.9182676255 746324.307084521 740901.1873580856 925914.7274623049 768395.4883596723 848994.7842966248 885691.5757898623 846761.3008586819 0.9934729219440002 1.0916094800175222 0.9693982441512393 0.8813868871046541 0.8749823434381734 1.0934778508693717 0.9074522980448674 1.0026376777442214 1.0459755008781129 1.0 19.69159581046269 -7.516825564014719 24.365935756424538 1.023427386221854 0.9734387453800606 0.07382922383569634 0.07236717631616293 593.5788781758548 2389415.6756557734 0.04821445488710984 0.01953383238441271 3.0421066537155465e-08 7.516825564014719 -0.04998864084179333 GLTLAPGLS(ph)PARPLFGSDFEK ddPTM_KYSE-520_SHP099_60min_R1 2 GLTLAPGLSPARPLFGSDFEK 21 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 GLTLAPGLS(1)PARPLFGSDFEK;GLTLAPGLS(1)PARPLFGSDFEK 231.4 1.883e-20 2304900000.0 2496400.0 2776100.0 2214900.0 2029700.0 2033940.0 2546800.0 1982360.0 2235400.0 2755300.0 2410700.0 True False 2357919.715549979 2642731.988988948 2357675.9979653023 2222602.0777484416 2193999.506464442 2530904.476512506 2182756.2947691954 2227645.9191462803 2255006.975460692 2389343.07349622 0.9868485366146014 1.1060496160235185 0.9867465346930775 0.930214711483942 0.9182438180608611 1.0592469974640961 0.9135382519912741 0.9323256856064058 0.9437769738780291 1.0 21.188182587160387 -4.97496728712441 11.011128158759044 0.955084640397816 1.0465361354653102 0.3409820430696384 0.04931476903942808 0.5394781365869552 231.3209507871349 0.012584576691759781 0.026075259482506063 1.05933351560025e-05 4.97496728712441 0.09145149506749417 GLTS(ph)VINQK ddPTM_KYSE-520_SHP099_60min_R1 1 GLTSVINQK 9 0 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 1 GLT(0.008)S(0.992)VINQK 131.42 0.00055523 121340000.0 550440.0 651620.0 537390.0 469960.0 509540.0 600170.0 454810.0 553860.0 681480.0 691040.0 True False 519905.99592506373 620315.1970984394 572031.0192544016 514624.8571013743 549637.8991139815 596424.1164082424 500786.6333178518 551938.7889318961 557740.4107127908 684917.923220984 0.7590778081555907 0.9056781492609576 0.8351818515192216 0.7513671925553248 0.8024872477116424 0.8707964796766025 0.7311629851395733 0.8058466134690665 0.8143171492576632 1.0 19.385571588266647 -8.270554568396527 5.828814546159582 0.9999999927015115 0.8094119531669111 0.561680588266526 0.050779596117397324 20.940663462147164 451.2269709174546 0.04916313288357066 0.012765146863233372 5.363464761424197e-09 8.270554568396527 -0.19058803953460046 GLVAAYSGDS(ph)DNEEELVER ddPTM_KYSE-520_SHP099_60min_R1 7 GLVAAYSGDSDNEEELVER 19 0 P52756 P52756 RBM5 RNA-binding protein 5 1 GLVAAYSGDS(1)DNEEELVER;GLVAAYSGDS(1)DNEEELVER;GLVAAYSGDS(1)DNEEELVER;GLVAAYSGDS(1)DNEEELVER;GLVAAYSGDS(1)DNEEELVER;GLVAAYSGDS(1)DNEEELVER;GLVAAYSGDS(1)DNEEELVER 399.04 5.032299999999999e-80 4529560000.0 3601960.0 3572340.0 3378580.0 2923412.0 2986470.0 3257810.0 2961930.0 3206220.0 3956280.0 3344480.0 True False 3402152.0984707596 3400719.424208339 3596368.672719135 3201252.1975241355 3221488.198310113 3237476.7993667424 3261350.790051109 3195098.371157373 3237919.2817027685 3314850.509166069 1.0263365087093033 1.0259043099545 1.084926352719263 0.9657304872941278 0.9718351368793873 0.9766584617962782 0.9838605937229975 0.9638740456990254 0.9767919466502113 1.0 21.660512379466635 -5.278758814536256 24.954443614891048 0.9755200074093423 1.0437405839089415 0.7537953961973451 0.01798358829960952 354.6302661921171 510962.82541552815 0.0049502100663208195 0.007366706982157278 5.263094712381979e-06 5.278758814536256 0.06822057649959923 GLVAAYSGES(ph)DS(ph)EEEQER ddPTM_KYSE-520_SHP099_60min_R1 1 GLVAAYSGESDSEEEQER 18 0 P98175-2;P98175;P98175-5;P98175-4;P98175-3 P98175-2 RBM10 RNA-binding protein 10 2 GLVAAYSGES(1)DS(1)EEEQER 227.09 3.6846000000000003e-16 0.0 358200.0 374850.0 322940.0 291640.0 305980.0 295780.0 244280.0 284760.0 421300.0 290440.0 True False 338329.9319460029 356841.6433386793 343757.2291222689 319357.37791523646 330058.8852119484 293933.92730597995 268974.20634305466 283772.23402348376 344802.5401087326 287866.9275589007 1.1752997637312015 1.2396062526691805 1.1941532569834112 1.1093923870427682 1.1465675755490001 1.021075709524978 0.934369948725769 0.9857757416937759 1.1977844868552407 1.0 18.13504252458335 -5.83271812015709 1.366183240232943 1.0227493482752392 1.204069494918867 0.5217271162684565 0.07003391653981987 0.33804665840344106 1.3197780145059885 0.028791592062811056 0.037768371074329794 1.46987999713204e-06 5.83271812015709 0.18132014664362783 GLVGEIIK ddPTM_KYSE-520_SHP099_60min_R1 2 GLVGEIIK 8 0 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;P15531;P15531-2;E5RHP0;F6XY72;C9K028 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 122.13 0.0069523 639270000.0 873000.0 1150050.0 841320.0 671730.0 950470.0 991740.0 835570.0 884220.0 1010260.0 1026650.0 False True 824572.949717646 1094799.8717397575 895552.8333595942 735571.0172370118 1025266.5815654629 985550.182792725 920037.5699773472 881152.8471985004 826822.2505821222 1017554.6797216128 0.8103475578759427 1.0759125711448525 0.8801029086757319 0.7228810715491502 1.0075788574290276 0.9685476391915924 0.9041652387948873 0.8659513486189953 0.8125580541856757 1.0 19.956674891131314 -10.176921224006971 4.937602514428513 1.000008707044334 0.8990963346413945 0.09331852146857456 0.09785601431264888 9.454469545702754e-06 1.5760264067977444e-06 0.09550656755344332 0.023161746614482774 6.653938399982167e-11 10.176921224006971 -0.10091237240293949 GLVGEIIKR ddPTM_KYSE-520_SHP099_60min_R1 2 GLVGEIIKR 9 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;P15531;P15531-2;E5RHP0;F6XY72;C9K028 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 165.15 0.00028054 2614700000.0 5221800.0 5028400.0 3863300.0 3038800.0 4509700.0 4499100.0 2812400.0 3221400.0 3882900.0 3027900.0 False True 4932136.344599774 4786828.116217727 4112334.4994985494 3327606.638351468 4864587.7333169645 4471019.448043592 3096704.838378939 3210225.715280416 3177863.2399434955 3001075.1616705554 1.6434564544042574 1.5950377309287809 1.3702870731199577 1.1088048312989096 1.6209483172720942 1.4898058886185273 1.031865138844157 1.0696918745258737 1.0589082474610634 1.0 21.517048020886662 -6.762524910668952 24.993757950541713 1.045923894603087 1.4627317978823628 0.6769126007706601 0.14587057938917877 19.459955526178412 448033.3728818814 0.06353939037669035 0.04558773131226815 1.7277268770920426e-07 6.762524910668952 0.41680790327927575 GLVGPELHDR ddPTM_KYSE-520_SHP099_60min_R1 5 GLVGPELHDR 10 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;;; 170.99 4.6603e-05 1993110000.0 2507310.0 2407540.0 1704850.0 1452810.0 2433370.0 2441980.0 1813530.0 1972960.0 1865990.0 2033630.0 False True 2368224.516101432 2291878.1646087863 1814747.358856445 1590884.6255967466 2624862.3750186274 2426738.6970135127 1996859.3107471762 1966116.262252325 1527173.2537799492 2015613.6203402001 1.1749397266435009 1.1370622531425232 0.9003448580339259 0.7892805493784236 1.3022646545599335 1.2039701818466189 0.9906954837952233 0.9754430325393808 0.7576716283164375 1.0 20.942787679668307 -7.296600453104133 2.6027630936056867 0.8829073648226805 1.073947493877331 0.20564343897683734 0.1519700138572366 0.5058170387072272 6.637643091476026 0.1079878599473756 0.045933778469811476 5.0512579491111204e-08 7.296600453104133 0.1910401290546505 GLVLDHGAR ddPTM_KYSE-520_SHP099_60min_R1 4 GLVLDHGAR 9 0 P40227-2;P40227 P40227-2 CCT6A T-complex protein 1 subunit zeta 0 ;;; 178.94 5.4611e-05 2288230000.0 2498090.0 2252400.0 1621110.0 1380610.0 2109000.0 2268490.0 1540580.0 1706320.0 1681960.0 1787520.0 False True 2359515.9678810476 2144191.3230786705 1725609.3444677105 1511822.7593044683 2274966.3014314626 2254331.5124563593 1696316.861011888 1700401.1741780825 1376558.4627611754 1771683.9634695163 1.3317928121110103 1.2102560994454492 0.973993883812338 0.8533253054590177 1.284070042027338 1.272423050012637 0.957460188153402 0.9597655164458115 0.7769774356739334 1.0 20.756689845339576 -6.911000013511887 6.765938188450349 0.9123933569449348 1.140463738591587 0.3699403635212133 0.14767266547001312 0.27303385476474146 17.24790285191332 0.06793669742043981 0.04559505004476126 1.227439192969987e-07 6.911000013511887 0.22807038164665216 GLVRPGS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 GLVRPGSSR 9 1 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 GLVRPGS(0.652)S(0.348)R 50.09 0.049811 934480000.0 231870.0 222850.0 210500.0 168270.0 212860.0 179490.0 187800.0 204530.0 231200.0 182970.0 True False 219007.7088786143 212143.9514953305 224069.16681190822 184262.33020777992 229610.870992272 178369.73633156487 206784.65675137436 203820.53316766108 189219.90807770944 181349.02814850578 1.2076585748188848 1.1698102474616345 1.2355686109793715 1.0160646135742644 1.2661268347368524 0.9835715038158287 1.1402578710377178 1.1239130159592225 1.0434018313170017 1.0 17.46840948834667 -1.0000000000000007 0.09561968659605875 0.9234564976257439 1.7487988057924033 0.35183479305636234 0.07845528964145795 155.96114149548356 1.0660037297964127 1.1128794585098682 16.87511196216927 0.09999999999999985 1.0000000000000007 0.8253423081666594 GLVRPGSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 6 GLVRPGSSR 9 1 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 GLVRPGS(0.017)S(0.983)R;GLVRPGS(0.097)S(0.903)R;GLVRPGS(0.204)S(0.796)R;GLVRPGS(0.432)S(0.568)R;GLVRPGS(0.293)S(0.707)R;GLVRPGS(0.004)S(0.996)R 66.56 0.018125 4955280000.0 2564020.0 2598070.0 2416253.0 2156118.0 2525323.0 2253859.0 2136587.0 2294987.0 2638430.0 2041570.0 True False 2421788.6993528497 2473254.817417424 2572008.5345214936 2361034.8064594883 2724051.552977622 2239791.8299544547 2352574.065039665 2287026.225750994 2159357.6214077435 2023483.2781174267 1.1968414691353375 1.2222758864201972 1.2710797081132266 1.1668170584815047 1.3462189593738467 1.1068991052094452 1.1626357828014333 1.1302422167178756 1.0671487354304847 1.0 20.9484094960796 -7.453904033972286 0.7023793795015283 1.0030785197479877 1.2353005752938544 0.6483544391686722 0.05617518911212056 0.40484157503928825 0.4080491290230114 0.05163486251847928 0.02367135411694931 3.516381334030315e-08 7.453904033972286 0.23222205554586672 GLWSTDS(ph)AEEDKETK ddPTM_KYSE-520_SHP099_60min_R1 9 GLWSTDSAEEDKETK 15 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GLWS(0.023)T(0.119)DS(0.858)AEEDKETK;GLWS(0.011)T(0.011)DS(0.978)AEEDKETK;GLWS(0.002)T(0.195)DS(0.803)AEEDKETK;GLWST(0.001)DS(0.999)AEEDKETK;GLWSTDS(1)AEEDKETK;GLWST(0.016)DS(0.984)AEEDKETK;GLWST(0.001)DS(0.998)AEEDKETK;GLWS(0.001)T(0.033)DS(0.965)AEEDKETK;GLWST(0.004)DS(0.996)AEEDKETK 296.44 3.9397e-33 11429200000.0 11884210.0 12179080.0 9791240.0 10945720.0 10971860.0 10119130.0 11496640.0 11331330.0 12234720.0 11910420.0 True False 11224969.180714706 11593978.715628212 10422398.996937899 11985997.937849287 11835282.960656159 10055972.756169315 12658832.567593822 11292024.26098229 10013203.26019252 11804902.944966536 0.9508734830811034 0.9821324893290835 0.8828873092414437 1.0153406591927947 1.0025735082983105 0.8518471353004268 1.0723368609304316 0.956553756826698 0.8482241071250846 1.0 23.49288284458444 -5.276280181112229 24.943197677971508 0.9634974660019721 0.9429812213675774 0.025702868048894545 0.06957115136319743 4496.577154736274 7557467.787904664 0.019519320152925745 0.029055293293541784 5.293218465670456e-06 5.276280181112229 -0.02051624463439461 GLWSTDS(ph)AEEDKETKR ddPTM_KYSE-520_SHP099_60min_R1 4 GLWSTDSAEEDKETKR 16 2 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GLWSTDS(1)AEEDKETKR;GLWST(0.001)DS(0.999)AEEDKETKR;GLWSTDS(1)AEEDKETKR;GLWSTDS(1)AEEDKETKR 191.47 2.1566e-12 2996780000.0 1324760.0 1364140.0 1233130.0 1088930.0 1238640.0 1174760.0 1193620.0 1244130.0 1469060.0 1306520.0 True False 1251272.921956411 1298604.6667841154 1312619.5328777607 1192421.5798012563 1336113.92110245 1167427.8870849044 1314282.7582086008 1239814.4034121265 1202315.7359889261 1294945.2492571778 0.9662747692801541 1.0028259245161422 1.0136486725062093 0.9208277959900372 1.0317918243021378 0.901526831157208 1.0149330706935413 0.9574261183037073 0.9284683940719602 1.0 20.304459670869235 -5.2138277685541325 24.99972722625095 0.9654415569616072 0.9951073943786616 0.09652402510735769 0.04097252219708055 952.6856985580957 500231.2699440971 0.010402325781360857 0.018017330257447395 6.111843588519144e-06 5.2138277685541325 0.02966583741705442 GLYDGPVCEVSVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 GLYDGPVCEVSVTPK 15 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 GLYDGPVCEVSVT(1)PK;GLYDGPVCEVSVT(1)PK;GLYDGPVCEVSVT(1)PK;GLYDGPVCEVSVT(1)PK;GLYDGPVCEVSVT(1)PK;GLYDGPVCEVS(0.001)VT(0.999)PK;GLYDGPVCEVSVT(1)PK;GLYDGPVCEVSVT(1)PK 337.68 1.2855999999999998e-53 16350600000.0 6699280.0 7993350.0 5468800.0 4443300.0 4364770.0 5853520.0 4611120.0 6426520.0 6958480.0 6163400.0 True False 6327657.583716411 7609337.467737036 5821327.598389378 4865589.8960731365 4708252.566855856 5816986.010427004 5077257.009794452 6404227.902081044 5694995.441005967 6108797.071052634 1.0358271047668086 1.2456359867959792 0.952941721697473 0.7964890369544924 0.7707331757943886 0.9522310109123747 0.831138594184725 1.048361539529337 0.9322613560028826 1.0 22.54245688545871 -4.905737120265018 6.176739352833558 0.8980502008673185 1.1378881385239086 0.48843644295334565 0.09506727283225865 0.16145846486031873 8.729073284576312 0.025363764740183398 0.05391061680815148 1.242404110919706e-05 4.905737120265018 0.23983793765659012 GMDDDRGPR ddPTM_KYSE-520_SHP099_60min_R1 2 GMDDDRGPR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 87.696 0.011816 1129620000.0 981850.0 1018390.0 723510.0 634080.0 985590.0 1000480.0 755050.0 881210.0 795010.0 863760.0 False True 927384.8232305503 969465.0157654457 770148.6122569307 694342.7725568966 1063150.325759999 994235.6332107873 831377.822577877 878153.2881859597 650656.2245711928 856107.7583951118 1.0832571182032702 1.1324100339691316 0.899593076577973 0.8110459994645238 1.2418417136564865 1.161344028787468 0.9711135244661322 1.0257508819125472 0.7600167364338979 1.0 19.70743287470551 -7.632957326835258 8.984408918047263 0.8807474251389126 1.040884543609322 0.19507052880714748 0.13097336330875753 0.45132302821926673 33.94639194783332 0.0932128676457614 0.03498607746243995 2.3283200238753155e-08 7.632957326835258 0.16013711847040935 GMDGSTNETAS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 GMDGSTNETASSR 13 0 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 GMDGSTNETAS(0.922)S(0.078)R 185.66 3.0819e-08 29709000.0 40790.0 42625.0 40685.0 35247.0 37448.0 39289.0 37962.0 40589.0 47844.0 41057.0 True False 38527.29738715093 40577.23101857062 43307.620198301636 38596.86428260304 40394.94455002628 39043.78277748543 41799.5694334168 40448.20623254381 39156.73564909133 40693.26692186266 0.9467732699153714 0.9971485232799115 1.0642453524672506 0.9484828130588523 0.9926689992128377 0.9594654283337709 1.0271863773847012 0.9939778565876903 0.9622411423560141 1.0 15.312502486522257 GMFRTVGQLY(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 GMFRTVGQLYK 11 1 P35579;P35579-2;P35749-4;P35749-3;P35749;P35749-2;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;M0QY43;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35580 MYH9;MYH11;MYH14;MYH10 Myosin-9;Myosin-11;Myosin-14;Myosin-10 1 GMFRT(0.001)VGQLY(0.999)K 49.368 0.062615 0.0 32536.0 38556.0 31898.0 26923.0 35233.0 31163.0 28050.0 28826.0 40279.0 34953.0 True False 30731.163221092 36703.711886264144 33954.196118604545 29481.753825304902 38005.636651652356 30968.500157672093 30885.567741618994 28726.00933403897 32965.34895096043 34643.343613022495 0.8870726672450895 1.059473712937661 0.9801073619764895 0.851007747826704 1.0970545186454221 0.8939235341599931 0.8915296423642276 0.8291927492599418 0.9515637208461801 1.0 15.080290558492054 GMGPGT(ph)PAGYGR ddPTM_KYSE-520_SHP099_60min_R1 6 GMGPGTPAGYGR 12 0 P23246 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 GMGPGT(1)PAGYGR;GMGPGT(1)PAGYGR;GMGPGT(1)PAGYGR;GMGPGT(1)PAGYGR;GMGPGT(1)PAGYGR;GMGPGT(1)PAGYGR 244.71 8.8264e-15 7115770000.0 5351390.0 4841010.0 4171610.0 4070630.0 3901310.0 4534670.0 4011300.0 4420160.0 5226540.0 4726730.0 True False 5054537.728968511 4608440.613095845 4440518.655412 4457501.4513204675 4208320.901582547 4506367.442479576 4416801.350515378 4404827.496633102 4277532.086351511 4684854.849540291 1.0789102098786467 0.9836890919999486 0.947845514540911 0.9514705566081448 0.8982820251080982 0.9619011873808151 0.9427829660397661 0.9402271016070717 0.913055414464175 1.0 22.159572919003214 -4.193616732342949 1.6317171824574914 0.9404703884736919 1.1460731355029063 0.7126530935082703 0.025815131526562864 0.5897779535517116 1.3335113187100787 0.006746813294988811 0.20155187252886667 6.4029965475692e-05 4.193616732342949 0.20560274702921444 GMGS(ph)LDAMDK ddPTM_KYSE-520_SHP099_60min_R1 7 GMGSLDAMDK 10 0 P12268;H0Y4R1 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 GMGS(1)LDAMDK;GMGS(1)LDAMDK;GMGS(1)LDAMDK;GMGS(1)LDAMDK;GMGS(1)LDAMDK;GMGS(1)LDAMDK;GMGS(1)LDAMDK 207.95 6.221399999999999e-09 7925010000.0 12202510.0 11314550.0 9471830.0 9927890.0 11013180.0 10948480.0 10160350.0 10667980.0 12772480.0 10827230.0 True False 11525612.445199398 10770982.03451421 10082399.317263834 10871433.680671038 11879854.609577505 10880146.475187548 11187457.333460191 10630975.26730524 10453319.60001893 10731309.16565748 1.074017369854916 1.0036969272103065 0.9395311570679281 1.0130575415217733 1.1070275235006388 1.0138694456782944 1.0425062926397168 0.9906503580501316 0.9740954657677577 1.0 23.35532275256967 -7.361180755063076 6.337391570815818 0.985836493855253 1.025260497086339 0.15317131464295997 0.04219146189960173 0.5315442908251767 28.418403374282924 0.0253114066508807 0.011945179008146688 4.3533064965495955e-08 7.361180755063076 0.03942400323108608 GMGWVAT(ph)GSLNVEQAK ddPTM_KYSE-520_SHP099_60min_R1 1 GMGWVATGSLNVEQAK 16 0 A0A0A0MRM2;Q86VF7-4;Q86VF7-3;Q86VF7;Q86VF7-2 A0A0A0MRM2 NRAP Nebulin-related-anchoring protein 1 GMGWVAT(0.971)GS(0.029)LNVEQAK 80.632 0.048585 90320000.0 123750.0 1098800.0 568030.0 282670.0 893900.0 453320.0 571580.0 635330.0 1196100.0 300660.0 True False 116885.340810491 1046011.9986675739 604646.1226801345 309534.8718121653 964244.8444047347 450490.6617294845 629360.8844832304 633126.1885171364 978918.3912272836 297996.3863099405 0.3922374437417531 3.510149943830649 2.0290384395844763 1.0387202195473064 3.23576019274892 1.511731961947141 2.11197488760365 2.12461028926248 3.285000879873519 1.0 18.18493531021036 -7.53781857221689 24.93008292798666 2.329934833943436 2.03752927571421 0.0 1.0135052332890893 1542.219548389492 2573445.76883209 0.6373845989136464 0.24109991904650402 2.8985542142667872e-08 7.53781857221689 -0.292405558229226 GMIIEHEGDRPS(ph)SKTEIEMDGK ddPTM_KYSE-520_SHP099_60min_R1 1 GMIIEHEGDRPSSKTEIEMDGK 22 2 E7EV41;P32418-2;P32418-3;P32418-4;P32418-5;P32418 E7EV41 SLC8A1 Sodium/calcium exchanger 1 1 GMIIEHEGDRPS(0.499)S(0.499)KT(0.003)EIEMDGK 197.89 4.2592000000000004e-14 346680000.0 185900.0 250950.0 218450.0 534580.0 330690.0 283870.0 312010.0 428460.0 512330.0 297400.0 True False 175587.75641753746 238893.98531637073 232531.63653235798 585386.3224726624 356713.4216312809 282098.2620337701 343551.0157241549 426973.77226331574 419303.7867882909 294765.26737369905 0.5956867238192276 0.8104550018557799 0.7888705430058617 1.9859406357076606 1.2101609691315662 0.9570268049122969 1.1655071127786776 1.4485213134762065 1.4225006579784847 1.0 18.169207013999408 -5.037343060074006 24.878845442075583 1.3125000804680085 0.7272183547666013 0.4825720284506807 0.27648702860660246 442.2706676161883 294651.0085719023 0.0766863708262032 0.13287349793802783 9.176074690317702e-06 5.037343060074006 -0.5852817257014071 GMNYLEDRR ddPTM_KYSE-520_SHP099_60min_R1 1 GMNYLEDRR 9 1 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 0 125.97 0.0016021000000000002 2437100000.0 125830.0 183200.0 94883.0 97675.0 170240.0 133410.0 79745.0 132800.0 129690.0 92970.0 False True 118849.95906411391 174398.79701119382 100999.3099981676 106958.00263294033 183636.91946690023 132577.33870407334 87806.40283619984 132339.34779575313 106141.56521885008 92146.35812956559 1.2897955109305654 1.8926282118059872 1.0960748970258165 1.1607404221287652 1.9928830959188986 1.4387691645681575 0.952901499511642 1.4361864156331907 1.1518801976916553 1.0 16.491639527367 -7.428492266013387 0.7101158361545907 1.033113401661044 1.4775833905474665 0.18793308466602499 0.30501357340505986 1.2098443776248993 1.2308806951709048 0.29735106404789674 0.13634471660371422 3.728273242533341e-08 7.428492266013387 0.44446998888642253 GMQEAS(ph)MKLT(ph)ESLHEVYEPDWYGREDVK ddPTM_KYSE-520_SHP099_60min_R1 2 GMQEASMKLTESLHEVYEPDWYGREDVK 28 2 P49418-2;P49418 P49418-2 AMPH Amphiphysin 2 GMQEAS(0.414)MKLT(0.414)ES(0.414)LHEVY(0.38)EPDWY(0.38)GREDVK;GMQEAS(0.616)MKLT(0.626)ES(0.572)LHEVY(0.159)EPDWY(0.027)GREDVK 79.021 0.0095914 629740000.0 780870.0 726150.0 633300.0 378480.0 739120.0 663970.0 675640.0 863560.0 910430.0 758040.0 True False 737553.584474248 691264.6640266291 674123.5313158265 414450.6254058386 797284.5389824668 659825.9169428342 743940.2848109605 860564.5119164201 745118.8620726163 751324.3553461967 0.9816713370544159 0.9200615674279676 0.8972470099218367 0.5516267673964426 1.061172226494764 0.8782171271937514 0.9901719271008675 1.1453967993888439 0.9917405934874546 1.0 19.51907634466119 -6.713739352977948 1.6502803145841816 1.0539109683815513 0.8661452222205772 0.24082110529527112 0.13047762139479696 0.5238012096715725 2.916904047107808 0.07157422712361224 0.045503884420625314 1.933128158896261e-07 6.713739352977948 -0.18776574616097408 GMQEAS(ph)MKLTESLHEVY(ph)EPDWYGREDVK ddPTM_KYSE-520_SHP099_60min_R1 27 GMQEASMKLTESLHEVYEPDWYGREDVK 28 2 P49418-2;P49418 P49418-2 AMPH Amphiphysin 2 GMQEAS(0.448)MKLT(0.488)ES(0.47)LHEVY(0.503)EPDWY(0.091)GREDVK;GMQEAS(0.449)MKLT(0.484)ES(0.468)LHEVY(0.49)EPDWY(0.109)GREDVK;GMQEAS(0.44)MKLT(0.489)ES(0.467)LHEVY(0.518)EPDWY(0.087)GREDVK;GMQEAS(0.442)MKLT(0.488)ES(0.467)LHEVY(0.511)EPDWY(0.091)GREDVK;GMQEAS(0.447)MKLT(0.486)ES(0.468)LHEVY(0.498)EPDWY(0.102)GREDVK;GMQEAS(0.405)MKLT(0.441)ES(0.425)LHEVY(0.364)EPDWY(0.364)GREDVK;GMQEAS(0.446)MKLT(0.486)ES(0.468)LHEVY(0.499)EPDWY(0.1)GREDVK;GMQEAS(0.396)MKLT(0.422)ES(0.41)LHEVY(0.386)EPDWY(0.386)GREDVK;GMQEAS(0.44)MKLT(0.489)ES(0.467)LHEVY(0.519)EPDWY(0.086)GREDVK;GMQEAS(0.464)MKLT(0.48)ES(0.46)LHEVY(0.5)EPDWY(0.096)GREDVK;GMQEAS(0.389)MKLT(0.419)ES(0.406)LHEVY(0.393)EPDWY(0.393)GREDVK;GMQEAS(0.41)MKLT(0.442)ES(0.428)LHEVY(0.36)EPDWY(0.36)GREDVK;GMQEAS(0.397)MKLT(0.424)ES(0.411)LHEVY(0.384)EPDWY(0.384)GREDVK;GMQEAS(0.439)MKLT(0.486)ES(0.465)LHEVY(0.507)EPDWY(0.103)GREDVK;GMQEAS(0.44)MKLT(0.489)ES(0.467)LHEVY(0.519)EPDWY(0.086)GREDVK;GMQEAS(0.445)MKLT(0.487)ES(0.468)LHEVY(0.503)EPDWY(0.097)GREDVK;GMQEAS(0.44)MKLT(0.489)ES(0.467)LHEVY(0.518)EPDWY(0.087)GREDVK;GMQEAS(0.44)MKLT(0.489)ES(0.467)LHEVY(0.519)EPDWY(0.086)GREDVK;GMQEAS(0.403)MKLT(0.433)ES(0.419)LHEVY(0.372)EPDWY(0.372)GREDVK;GMQEAS(0.444)MKLT(0.486)ES(0.467)LHEVY(0.505)EPDWY(0.098)GREDVK;GMQEAS(0.439)MKLT(0.489)ES(0.467)LHEVY(0.521)EPDWY(0.085)GREDVK;GMQEAS(0.444)MKLT(0.486)ES(0.467)LHEVY(0.505)EPDWY(0.098)GREDVK;GMQEAS(0.819)MKLT(0.352)ES(0.306)LHEVY(0.439)EPDWY(0.085)GREDVK;GMQEAS(0.408)MKLT(0.438)ES(0.425)LHEVY(0.365)EPDWY(0.365)GREDVK;GMQEAS(0.371)MKLT(0.371)ES(0.371)LHEVY(0.444)EPDWY(0.444)GREDVK;GMQEAS(0.44)MKLT(0.489)ES(0.467)LHEVY(0.519)EPDWY(0.086)GREDVK;GMQEAS(0.396)MKLT(0.422)ES(0.41)LHEVY(0.386)EPDWY(0.386)GREDVK 80.342 0.006462899999999999 35940311000.0 5425737.0 5114969.0 4253877.0 2831863.0 5140614.0 4325475.0 4649495.0 5946453.0 6337292.0 5267683.0 True False 5124760.552671444 4869238.211515004 4528088.71786385 3101002.408089344 5545151.075707358 4298478.106071512 5119511.32929836 5925826.142455569 5186599.522930804 5221015.426815361 0.9815639552318601 0.9326228354941044 0.8672812370190272 0.5939462258936187 1.0620828751486202 0.8233030846824054 0.9805585524617163 1.1349949498368208 0.9934081972430505 1.0 22.31589899082502 -6.9580487981604 5.33487617819289 1.0504664802189765 0.8753165099756941 0.2825523086712225 0.12019807556957292 0.23641368079065447 16.110792074502573 0.0527201926269922 0.03446384740452121 1.101415545426589e-07 6.9580487981604 -0.17514997024328238 GMQEASMKLT(ph)ES(ph)LHEVYEPDWYGREDVK ddPTM_KYSE-520_SHP099_60min_R1 3 GMQEASMKLTESLHEVYEPDWYGREDVK 28 2 P49418-2;P49418 P49418-2 AMPH Amphiphysin 2 GMQEAS(0.546)MKLT(0.654)ES(0.606)LHEVY(0.167)EPDWY(0.028)GREDVK;GMQEAS(0.421)MKLT(0.464)ES(0.445)LHEVY(0.335)EPDWY(0.335)GREDVK;GMQEAS(0.181)MKLT(0.794)ES(0.778)LHEVY(0.213)EPDWY(0.034)GREDVK 88.191 0.0038634 892720000.0 220168.0 213045.0 175285.0 135798.0 221239.0 190169.0 197720.0 238120.0 257397.0 231442.0 True False 207954.84214597338 202809.99841293538 186584.15156591617 148704.2010908427 238649.2506222832 188982.08473139117 217707.4671612448 237294.0172976255 210660.19325033773 229391.60393915142 0.9065494925487143 0.8841212796381724 0.8133870131332689 0.648254768427741 1.0403573911344526 0.823840460967877 0.9490646711681481 1.0344494446299364 0.9183430850687002 1.0 17.80745306205462 -6.605927158097456 1.1627822081546573 0.9861174450799784 0.8363352827067431 0.2742934746017234 0.09617605535716311 0.6504442331976592 1.790729793658204 0.060194473747900525 0.03956058320785212 2.477837617301338e-07 6.605927158097456 -0.14978216237323538 GMQEASMKLT(ph)ESLHEVY(ph)EPDWYGREDVK ddPTM_KYSE-520_SHP099_60min_R1 8 GMQEASMKLTESLHEVYEPDWYGREDVK 28 2 P49418-2;P49418 P49418-2 AMPH Amphiphysin 2 GMQEAS(0.277)MKLT(0.542)ES(0.528)LHEVY(0.549)EPDWY(0.105)GREDVK;GMQEAS(0.131)MKLT(0.595)ES(0.589)LHEVY(0.591)EPDWY(0.094)GREDVK;GMQEAS(0.264)MKLT(0.492)ES(0.484)LHEVY(0.38)EPDWY(0.38)GREDVK;GMQEAS(0.239)MKLT(0.552)ES(0.54)LHEVY(0.552)EPDWY(0.117)GREDVK;GMQEAS(0.175)MKLT(0.522)ES(0.516)LHEVY(0.393)EPDWY(0.393)GREDVK;GMQEAS(0.031)MKLT(0.633)ES(0.632)LHEVY(0.621)EPDWY(0.083)GREDVK;GMQEAS(0.31)MKLT(0.53)ES(0.514)LHEVY(0.548)EPDWY(0.098)GREDVK;GMQEAS(0.187)MKLT(0.527)ES(0.523)LHEVY(0.382)EPDWY(0.382)GREDVK 83.557 0.0046768 10247618000.0 1518423.0 1492375.0 1359193.3 845298.6 1436536.5 1373949.8 1348327.2 1712001.1 1700757.4 1433907.6 True False 1434193.0492887923 1420679.0648994567 1446809.074904172 925635.5247957087 1549583.7497753904 1365374.4696573995 1484629.27178137 1706062.5677681603 1391942.7287650672 1421204.2942272304 1.0091392596506503 0.9996304336189336 1.018016256199721 0.6513036363283833 1.090331457672639 0.960716538222826 1.0446276287031813 1.2004344306430763 0.9794107254101185 1.0 20.438682522274938 -6.534455101673439 1.774092933877681 1.0723126670411758 0.9411472550688526 0.1355143664585311 0.12267234850463231 0.6516674636478346 4.140603853913871 0.05846161316927593 0.04361953059977802 2.9210897333315274e-07 6.534455101673439 -0.13116541197232323 GMYDGPVFDLTT(ph)TPK ddPTM_KYSE-520_SHP099_60min_R1 1 GMYDGPVFDLTTTPK 15 0 Q14195-2;Q14195;H0YBT4 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GMYDGPVFDLT(0.002)T(0.605)T(0.393)PK 162.72 2.3628e-07 189510000.0 334250.0 423330.0 283660.0 238120.0 258490.0 341080.0 262640.0 333020.0 355190.0 347770.0 True False 315708.4861891445 402992.5913687159 301945.17747204733 260750.85320661115 278831.6923930864 338951.19320279843 289190.2143193874 331864.8313474523 290696.44961125223 344689.0283609659 0.915922643927406 1.1691482995121425 0.8759930042097067 0.7564814419725224 0.8089369531689524 0.983353589217935 0.8389887420975323 0.9627948789826759 0.8433585803225176 1.0 18.394935852105903 -4.796110876221991 24.871521728589567 0.8771526575454438 1.0425354389194779 0.31352295733452473 0.09358478364534509 160.8001882449513 115349.27289551443 0.02378511904921424 0.049516091030032995 1.5991497104777653e-05 4.796110876221991 0.16538278137403406 GMYDGPVFDLTTT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 13 GMYDGPVFDLTTTPK 15 0 Q14195-2;Q14195;H0YBT4 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GMYDGPVFDLTT(0.004)T(0.996)PK;GMYDGPVFDLTT(0.271)T(0.729)PK;GMYDGPVFDLTT(0.006)T(0.994)PK;GMYDGPVFDLT(0.002)T(0.019)T(0.979)PK;GMYDGPVFDLTT(0.001)T(0.998)PK;GMYDGPVFDLTT(0.024)T(0.976)PK;GMYDGPVFDLT(0.026)T(0.252)T(0.722)PK;GMYDGPVFDLT(0.001)T(0.031)T(0.968)PK;GMYDGPVFDLT(0.001)T(0.033)T(0.966)PK;GMYDGPVFDLT(0.008)T(0.203)T(0.789)PK;GMYDGPVFDLT(0.001)T(0.004)T(0.995)PK;GMYDGPVFDLT(0.001)T(0.091)T(0.908)PK;GMYDGPVFDLTT(0.032)T(0.968)PK 194.77 1.6296000000000002e-10 6772531000.0 10097193.0 11926233.0 8070627.0 6767087.0 7420729.0 9759107.0 7132952.0 9161658.0 11010359.0 9826437.0 True False 9537081.576034782 11353278.865039295 8590872.52987976 7410228.913881101 8004698.15412765 9698196.793256056 7854020.399062986 9129878.346745048 9011155.354163392 9739382.413032291 0.9792285764724866 1.1657082947936661 0.8820756969542846 0.7608520334888438 0.8218897066221102 0.9957712288079863 0.8064187302629684 0.9374186123473636 0.9252286204621705 1.0 23.215398861354128 -4.780102536174968 24.8541767980419 0.8825468884884528 1.072468400147153 0.4154586475589346 0.08551001609254609 172.81786497678775 230145.99341608718 0.022067302784234355 0.046067378890813755 1.6591951280941952e-05 4.780102536174968 0.1899215116587002 GNAEGS(ph)S(ph)DEEGKLVIDEPAK ddPTM_KYSE-520_SHP099_60min_R1 53 GNAEGSSDEEGKLVIDEPAK 20 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 2 GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK;GNAEGS(1)S(1)DEEGKLVIDEPAK 174.06 2.4975999999999997e-09 160646738000.0 49464677.0 40559087.0 37278580.0 42598241.0 43459353.0 43151901.0 45132714.0 47184573.0 48651725.0 43466174.0 True False 46720772.76142107 38610567.5800892 39681616.914636925 46646765.01701178 46879356.83120645 42882573.97947402 49695169.183961436 47020900.72922515 39817798.15018162 43081097.51453169 1.0844842740058256 0.896229896814153 0.9210911328628969 1.0827664035550013 1.088165333192674 0.9953918644948472 1.1535260717812204 1.0914508552936593 0.9242521766477904 1.0 25.360551668007382 -5.265817366090903 24.942729639940943 1.0556330110137657 0.9601645800385498 0.18497889979750848 0.07597056116420711 500.9105442519935 2853847.745092293 0.02102567141657947 0.03243322968368294 5.4222886603119086e-06 5.265817366090903 -0.09546843097521596 GNAEGS(ph)S(ph)DEEGKLVIDEPAKEK ddPTM_KYSE-520_SHP099_60min_R1 15 GNAEGSSDEEGKLVIDEPAKEK 22 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 2 GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK;GNAEGS(1)S(1)DEEGKLVIDEPAKEK 125.42 5.7795e-05 153211500000.0 89734710.0 89096830.0 87124960.0 76442200.0 79203470.0 74953910.0 68544180.0 70526940.0 109698930.0 72595820.0 True False 84756946.75459042 84816484.54973161 92741174.32646489 83707243.70481446 85436332.48290096 74486094.84494886 75473294.64113106 70282298.50625145 89780369.59698552 71952677.51349324 1.177954034284492 1.1787814919580446 1.2889190163781354 1.1633652366740195 1.1873961530740693 1.0352094935032894 1.0489296194290698 0.9767850333724059 1.247769682791152 1.0 26.10054503795356 -6.204872107008522 5.369910449592446 1.0594962372504846 1.2025176446035308 0.4540678308752357 0.07540175496953982 0.19435603844757882 12.207715639407697 0.024595459133634888 0.024358674383234726 6.239185427690279e-07 6.204872107008522 0.14302140735304625 GNAEGS(ph)SDEEGKLVIDEPAK ddPTM_KYSE-520_SHP099_60min_R1 3 GNAEGSSDEEGKLVIDEPAK 20 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.5)S(0.5)DEEGKLVIDEPAK;GNAEGS(0.5)S(0.5)DEEGKLVIDEPAK;GNAEGS(0.5)S(0.5)DEEGKLVIDEPAK 135.58 1.9327e-06 4783800000.0 5657540.0 4236490.0 4058680.0 4185220.0 4752650.0 4574940.0 4603440.0 5094560.0 5161550.0 4551720.0 True False 5343704.978173616 4032962.66129887 4320309.006917608 4582982.050467719 5126656.516120554 4546386.102472169 5068800.640444865 5076888.160439237 4224342.632086934 4511395.301984576 1.1844905224383475 0.8939501842201144 0.9576436374389741 1.0158679840030096 1.1363793622485983 1.0077560927707225 1.1235549760436834 1.1253476631067776 0.9363716432095041 1.0 22.105142274185777 -5.540010302747503 24.824736907275316 1.0635061592992952 0.9979762173359968 0.03689833604163073 0.0912582827128454 521.3211295940621 755423.6646850014 0.02609336623646677 0.03369424236274822 2.8839630861948616e-06 5.540010302747503 -0.06552994196329831 GNAEGS(ph)SDEEGKLVIDEPAKEK ddPTM_KYSE-520_SHP099_60min_R1 5 GNAEGSSDEEGKLVIDEPAKEK 22 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.5)S(0.5)DEEGKLVIDEPAKEK;GNAEGS(0.5)S(0.5)DEEGKLVIDEPAKEK;GNAEGS(0.867)S(0.133)DEEGKLVIDEPAKEK;GNAEGS(0.5)S(0.5)DEEGKLVIDEPAKEK;GNAEGS(0.5)S(0.5)DEEGKLVIDEPAKEK 206.88 3.731e-15 13082040000.0 9624900.0 9001000.0 8778700.0 8095100.0 8129100.0 7397700.0 7291900.0 7475350.0 10745700.0 7175950.0 True False 9090987.610237543 8568578.449223557 9344589.048416622 8864455.870119434 8768813.921747983 7351528.210262509 8029036.414085982 7449419.755609803 8794551.757052947 7112376.665804613 1.2781926544956252 1.2047419381513038 1.3138490110266794 1.2463422969059823 1.2328950411059225 1.0336247017973197 1.1288823400887287 1.0473882508818253 1.2365137801736532 1.0 22.76190029949562 -6.146925354559643 5.412318486964912 1.0951946077649437 1.257950867367218 0.6166028363099793 0.06552472247459415 0.1560776627807887 6.396941581388366 0.02063803998225911 0.020680974555186506 7.12975564037791e-07 6.146925354559643 0.16275625960227424 GNAEGSS(ph)DEEGKLVIDEPAK ddPTM_KYSE-520_SHP099_60min_R1 7 GNAEGSSDEEGKLVIDEPAK 20 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.091)S(0.909)DEEGKLVIDEPAK;GNAEGS(0.335)S(0.665)DEEGKLVIDEPAK;GNAEGS(0.156)S(0.844)DEEGKLVIDEPAK;GNAEGS(0.371)S(0.629)DEEGKLVIDEPAK;GNAEGS(0.355)S(0.645)DEEGKLVIDEPAK;GNAEGS(0.348)S(0.652)DEEGKLVIDEPAK;GNAEGS(0.019)S(0.981)DEEGKLVIDEPAK 277.59 3.8199e-36 24542400000.0 17172100.0 13498420.0 12627390.0 13252370.0 14012440.0 14636650.0 14918690.0 16380760.0 16819600.0 14624620.0 True False 16219529.38126732 12849935.64165851 13441371.763938366 14511871.260329673 15115139.308122465 14545297.238160362 16426816.777583396 16323938.966858108 13765584.627611747 14495057.244582197 1.1189696672174012 0.8865046494701784 0.9273072563381792 1.0011599827074682 1.0427788626893513 1.00346600863525 1.1332702244914026 1.1261727836886943 0.9496743886787268 1.0 23.789057695183235 -5.6833461498105375 2.7111030779675755 1.0530706773926166 0.9679968048890876 0.1165804301978719 0.0768150606057414 0.4599320778632053 6.866918781529068 0.024551270545978245 0.03240498839371832 2.0732603885349572e-06 5.6833461498105375 -0.08507387250352905 GNAEGSS(ph)DEEGKLVIDEPAKEK ddPTM_KYSE-520_SHP099_60min_R1 3 GNAEGSSDEEGKLVIDEPAKEK 22 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 GNAEGS(0.143)S(0.857)DEEGKLVIDEPAKEK;GNAEGS(0.092)S(0.908)DEEGKLVIDEPAKEK;GNAEGS(0.374)S(0.626)DEEGKLVIDEPAKEK 216.71 1.3689e-19 6558470000.0 2956460.0 2927390.0 3097810.0 2299910.0 2702450.0 2452770.0 2431340.0 2330230.0 3683660.0 2282880.0 True False 2792459.270243103 2786753.79029803 3297499.789271252 2518492.7549068434 2915117.440162853 2437461.352621163 2677123.5747917276 2322146.976009771 3014800.2015118264 2262655.4592537647 1.2341513414349308 1.2316297556045566 1.4573583334507254 1.113069488598788 1.2883611723741066 1.0772569648871995 1.1831777409339452 1.0262927864305187 1.3324168243034769 1.0 21.109585487526438 -5.874898272659953 1.4152099137662435 1.131143881466845 1.2874521875060927 0.24212852444170152 0.11888940795066096 0.5909006175860203 2.464018793454949 0.04487868587034374 0.056221324916954134 1.3338338272841112e-06 5.874898272659953 0.1563083060392476 GNDPLTSS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 10 GNDPLTSSPGR 11 0 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 GNDPLTS(0.004)S(0.996)PGR;GNDPLT(0.001)S(0.003)S(0.996)PGR;GNDPLTS(0.001)S(0.999)PGR;GNDPLTSS(1)PGR;GNDPLT(0.044)S(0.234)S(0.721)PGR;GNDPLTS(0.004)S(0.996)PGR;GNDPLTS(0.003)S(0.997)PGR;GNDPLTS(0.002)S(0.998)PGR;GNDPLTS(0.02)S(0.98)PGR;GNDPLT(0.111)S(0.218)S(0.672)PGR 174.51 8.8589e-06 57736840000.0 30560260.0 29969180.0 26624660.0 22115190.0 24845840.0 28620410.0 23662970.0 26891750.0 31283720.0 26625260.0 True False 28865021.457432013 28529415.60814375 28340928.184562214 24217011.008425683 26801066.254508253 28441779.404987976 26055053.935932234 26798468.795831602 25603385.046404786 26389380.91053882 1.0938119979125591 1.0810945396885112 1.0739519915468736 0.9176801490918803 1.0156004169012174 1.077773650750159 0.9873310034918982 1.015501988723404 0.9702154489035346 1.0 24.65345416994309 -5.032904725046494 24.848434482589404 1.001544110809358 1.0849707958097117 0.5124979101158686 0.03809932138807671 481.095646929557 363305.3659685588 0.0106053444896968 0.01838876715085534 9.270331723941076e-06 5.032904725046494 0.08342668500035377 GNDS(ph)DGEGESDDPEK ddPTM_KYSE-520_SHP099_60min_R1 2 GNDSDGEGESDDPEK 15 0 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 GNDS(1)DGEGESDDPEK;GNDS(1)DGEGESDDPEK 276.62 3.3010999999999996e-36 1461090000.0 2108280.0 1714100.0 1439760.0 1930850.0 1942590.0 1846150.0 2134940.0 2083700.0 1903650.0 1830540.0 True False 1991329.5056480153 1631752.0630834454 1532569.2332974507 2114357.403468779 2095460.7811748448 1834627.4930554281 2350760.5702064894 2076472.1310392348 1557995.1471112946 1814322.8397385718 1.0975607328709749 0.8993724971894014 0.8447059143665306 1.1653699976424479 1.1549547496611918 1.0111913121921465 1.295668289412712 1.144488778710649 0.8587199108047321 1.0 20.790999760498707 -5.269416264888759 24.959918405276213 1.1040617611777328 0.9424289909714818 0.20578039854489882 0.1264168222699823 813.9023662374619 2546725.506330579 0.035657806375394424 0.05400194099031036 5.37754106001126e-06 5.269416264888759 -0.161632770206251 GNDS(ph)DGEGESDDPEKK ddPTM_KYSE-520_SHP099_60min_R1 1 GNDSDGEGESDDPEKK 16 1 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 GNDS(1)DGEGESDDPEKK 141.97 1.6039e-05 280900000.0 263760.0 223210.0 200700.0 242480.0 244180.0 251930.0 271840.0 272260.0 248260.0 257210.0 True False 249128.70700747558 212486.65655495922 213637.443131354 265525.2262957294 263395.57680584886 250357.61142131157 299320.24010273453 271315.5936059618 203182.24212531163 254931.31950635219 0.9772385263995308 0.8335054985257103 0.8380196028681001 1.0415559249836042 1.0332021083791776 0.9820590577340708 1.1741210953692816 1.0642693652993915 0.7970077686757076 1.0 17.959749100526704 -5.266443592446811 24.854977093006593 1.022095736301903 0.8779796363785021 0.2765008996503776 0.09569493778363883 459.7474068146198 2283480.4705243474 0.027130709262152254 0.04172156364529481 5.414475682538513e-06 5.266443592446811 -0.1441160999234009 GNDS(ph)DGEGESDDPEKKK ddPTM_KYSE-520_SHP099_60min_R1 7 GNDSDGEGESDDPEKKK 17 2 K7EKZ3;O75351 K7EKZ3 VPS4B Vacuolar protein sorting-associated protein 4B 1 GNDS(0.946)DGEGES(0.054)DDPEKKK;GNDS(1)DGEGESDDPEKKK;GNDS(1)DGEGESDDPEKKK;GNDS(1)DGEGESDDPEKKK;GNDS(1)DGEGESDDPEKKK;GNDS(1)DGEGESDDPEKKK;GNDS(0.999)DGEGES(0.001)DDPEKKK 159.46 3.766e-08 6860020000.0 8147600.0 7728750.0 7233830.0 6583740.0 7142270.0 6735300.0 6028730.0 6393310.0 9680990.0 6230570.0 True False 7695636.386162063 7357449.248909741 7700134.256337235 7209456.670126392 7704326.015042634 6693262.494367317 6638172.863134792 6371133.099819765 7923166.253898026 6175371.997110103 1.2461818315987119 1.1914179829737894 1.2469101877491229 1.167453017162401 1.24758897417808 1.0838638542746206 1.0749429939186281 1.0317002931647312 1.2830265541259442 1.0 22.558094614883224 -6.266986138888707 24.81014614633625 1.0954527680160784 1.2169131768845358 0.4170697061277361 0.07396504759437736 428.03122397516324 1914537.107421739 0.02455896488453677 0.022258004131736647 5.407715821459164e-07 6.266986138888707 0.12146040886845744 GNDVAFHFNPR ddPTM_KYSE-520_SHP099_60min_R1 5 GNDVAFHFNPR 11 0 G3V3R6;P17931 G3V3R6 LGALS3 Galectin;Galectin-3 0 ;;;; 132.76 0.00022030000000000004 3939870000.0 4281810.0 4532450.0 3685150.0 4538900.0 4534960.0 3781950.0 5560780.0 4146830.0 8529950.0 3453060.0 False True 4044289.463723386 4314704.298653854 3922700.665448479 4970275.691329957 4891835.551607219 3758345.4472068776 6122917.910382899 4132445.6146073947 6981126.102540906 3422468.574840026 1.181687830081077 1.260699464232636 1.1461611932059406 1.4522487446250048 1.42932957443908 1.0981387746949733 1.7890355386737478 1.2074458900767422 2.0397926087216796 1.0 21.70660586401974 -5.582294355769459 0.7526988946994009 1.484748876083156 1.175340504118306 0.09757444899757628 0.2956089347373008 1.7612625454150987 2.0412212135087624 0.15266207311924432 0.3399730042774496 2.6164090594571365e-06 5.582294355769459 -0.30940837196484994 GNEEKPAS(ph)PSAAVPPGTDHDPHGLVVK ddPTM_KYSE-520_SHP099_60min_R1 4 GNEEKPASPSAAVPPGTDHDPHGLVVK 27 1 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 GNEEKPAS(0.734)PS(0.266)AAVPPGTDHDPHGLVVK;GNEEKPAS(0.879)PS(0.121)AAVPPGTDHDPHGLVVK;GNEEKPAS(0.949)PS(0.051)AAVPPGTDHDPHGLVVK;GNEEKPAS(0.878)PS(0.122)AAVPPGTDHDPHGLVVK 214.99 1.7613e-22 14125200000.0 6793200.0 5868600.0 5645700.0 6553400.0 6253700.0 7276600.0 6640600.0 7826100.0 8918900.0 7559800.0 True False 6416367.654091532 5586663.647051811 6009630.855439386 7176233.165648442 6745830.61131435 7231184.0402822895 7311896.654010531 7798953.0857254695 7299452.587172504 7492826.053435406 0.8563347938859031 0.745601673815765 0.8020512971449557 0.9577471990502424 0.9003052470731568 0.9650809973049947 0.9758529828218926 1.040856017490184 0.974192185313812 1.0 22.837078528902456 -5.551797708586061 0.9507774530931398 0.9979866706431443 0.7826750129916686 0.7716580939276863 0.04254085004538079 0.2751577863568647 0.5116080386286325 0.019045042211492075 0.039389480881279554 2.8067406942323163e-06 5.551797708586061 -0.21531165765147564 GNEEKPASPS(ph)AAVPPGTDHDPHGLVVK ddPTM_KYSE-520_SHP099_60min_R1 1 GNEEKPASPSAAVPPGTDHDPHGLVVK 27 1 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 GNEEKPAS(0.276)PS(0.717)AAVPPGT(0.006)DHDPHGLVVK 66.447 0.019278 840690000.0 323220.0 206500.0 203360.0 237390.0 255200.0 268740.0 250390.0 283440.0 357130.0 280540.0 True False 305290.34227690415 196579.4300371809 216468.9109875043 259951.47422609373 275282.78811062546 267062.69397595845 275701.86477090826 282456.81279539346 292284.19451467285 278054.63385681715 1.0979509244003893 0.7069813126668066 0.7785121505976191 0.9348935157827812 0.9900312909454368 0.9604684168417098 0.9915384647496275 1.0158320646468464 1.0511754127614472 1.0 18.085008854688734 -5.522303753825188 3.8315954646835326 0.9987612674967568 0.8457901508291656 0.2951697164223943 0.09609607336827866 0.25473374804022575 8.338123361738296 0.02830673946760028 0.03999062936534324 3.003974530752391e-06 5.522303753825188 -0.1529711166675911 GNFNYIEFTR ddPTM_KYSE-520_SHP099_60min_R1 2 GNFNYIEFTR 10 0 J3QRS3;P19105;O14950 J3QRS3 MYL12A;MYL12B Myosin regulatory light chain 12A;Myosin regulatory light chain 12B 0 ; 160.53 0.00057532 1127570000.0 959870.0 1019760.0 730670.0 742370.0 1117520.0 1057370.0 893220.0 883570.0 835190.0 883450.0 False True 906624.097646594 970769.1989090338 777770.1573133349 812924.6215983201 1205462.466180981 1050770.5616185125 983515.3945871281 880505.1018967882 683540.5494265653 875623.3203136987 1.0354042390303049 1.1086607407409481 0.8882474224586581 0.928395353046426 1.3766906821863936 1.200025784194585 1.1232174518088167 1.0055752073635278 0.7806331028069029 1.0 19.73995085249713 -7.538254769645966 6.072165752648297 0.888701022205922 1.0937629121319854 0.259342128535314 0.13768509405613072 0.23163965863855115 32.11237216504032 0.09911683480176017 0.038458291549740536 2.895644420980089e-08 7.538254769645966 0.20506188992606345 GNFS(ph)PLELDNVLLK ddPTM_KYSE-520_SHP099_60min_R1 6 GNFSPLELDNVLLK 14 0 Q52LW3;F8VWZ8;Q52LW3-2 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 GNFS(1)PLELDNVLLK;GNFS(1)PLELDNVLLK;GNFS(1)PLELDNVLLK;GNFS(1)PLELDNVLLK;GNFS(1)PLELDNVLLK;GNFS(1)PLELDNVLLK 203.59 2.2308000000000004e-11 1713117000.0 3437830.0 3735384.0 2599109.0 2589637.0 2766209.0 3500717.0 2715067.0 3432864.0 3711587.0 3776648.0 True False 3247126.716755799 3555930.5457143066 2766651.7248614356 2835755.3218772477 2983893.9107237696 3478867.726677966 2989532.4688604064 3420956.1960204816 3037656.362294204 3743189.8369076806 0.8674758316394424 0.9499733384219508 0.7391160602068257 0.7575772123328691 0.7971527068444972 0.9293858655995721 0.7986590579467151 0.9139146944378855 0.8115154439518539 1.0 21.835836786095392 -6.244749379175198 24.71828961856731 0.8795624379090436 0.8211417810892156 0.15716982282240688 0.07709213628211065 1668.8632119553718 2471627.5106405127 0.02608055610518036 0.026004722415363966 5.691812968267883e-07 6.244749379175198 -0.058420656819828 GNIETTS(ph)EDGQVFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 GNIETTSEDGQVFSPK 16 0 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 GNIET(0.024)T(0.036)S(0.94)EDGQVFS(1)PK;GNIET(0.133)T(0.154)S(0.714)EDGQVFS(1)PK 211.33 6.7779999999999996e-12 0.0 642020.0 593990.0 595440.0 546600.0 586530.0 573420.0 524190.0 586540.0 701670.0 582410.0 True False 606405.8707648604 565453.8288028324 633823.0151376851 598548.699658718 632686.5741008043 569841.0730806511 577180.2408013996 584505.4296394645 574264.4156612722 577250.3005081231 1.0505076744543453 0.9795643732105347 1.0980037854978404 1.0368962980735514 1.096035070997596 0.9871646191938748 0.9998786320134232 1.012568428504853 0.9948274000997097 1.0 19.138837493482484 -6.28966178104099 24.974078675192764 0.999735264646768 1.0498603459907763 0.41661776741600176 0.031475063958863736 775.1740102212339 685951.7750073088 0.011029591098265054 0.00972871428977414 5.13260944684331e-07 6.28966178104099 0.05012508134400828 GNIETTSEDGQVFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 GNIETTSEDGQVFSPK 16 0 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK;GNIETTSEDGQVFS(1)PK 237.73 5.0104999999999995e-23 10826860000.0 11066010.0 12112870.0 9103180.0 7339790.0 8094180.0 11299880.0 8127810.0 10090330.0 12725190.0 11705030.0 True False 10452156.365755962 11530949.543411467 9689985.548402982 8037361.434811666 8731145.916415622 11229353.257442344 8949448.354581393 10055329.000330718 10414616.271935064 11601332.540575545 0.9009444673014629 0.9939331971635229 0.8352476333655943 0.6927964013358874 0.7525985386487739 0.9679365036876404 0.7714155527635111 0.8667391409704277 0.8977086240317694 1.0 23.467787188466854 -9.788728948939973 9.133847215375562 0.9999999979325406 0.850547968697579 0.1938071981534426 0.08963323479423468 0.0 0.0 0.09262715067740727 0.022465384052259722 1.6265636068611145e-10 9.788728948939973 -0.1494520292349616 GNISFVAFPVSNTNS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 3 GNISFVAFPVSNTNSPTK 18 0 F8WAY9;C9JTZ9;Q14188 F8WAY9 TFDP2 Transcription factor Dp-2 1 GNISFVAFPVS(0.006)NT(0.028)NS(0.959)PT(0.008)K;GNISFVAFPVSNT(0.266)NS(0.733)PTK;GNISFVAFPVSNTNS(0.987)PT(0.013)K 389.49 1.1616e-86 1242939000.0 1246190.0 1558000.0 1129490.0 996880.0 1037580.0 1568560.0 1052370.0 1367020.0 1418960.0 1472330.0 True False 1177061.3564818255 1483151.3413943225 1202298.732647897 1091623.1754770977 1119231.6429773625 1558770.0352122108 1158753.829741448 1362278.1266848661 1161312.633070703 1459286.3016554082 0.8066007027864046 1.0163539119854972 0.8238950309367081 0.7480527804850666 0.7669719380684317 1.0681728687810943 0.7940551682195348 0.9335235485589796 0.7958086303923464 1.0 20.476831526916822 GNIWS(ph)AEK ddPTM_KYSE-520_SHP099_60min_R1 5 GNIWSAEK 8 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 GNIWS(1)AEK;GNIWS(1)AEK;GNIWS(1)AEK;GNIWS(1)AEK;GNIWS(1)AEK 127.87 0.00084041 10636800000.0 11112400.0 10272170.0 9534940.0 8444830.0 9073680.0 8692760.0 8925690.0 8655700.0 10608260.0 8790290.0 True False 10495973.019979794 9778679.53435848 10149577.488843417 9247424.104169274 9787726.993822966 8638505.260424405 9827985.851539806 8625675.396955576 8682067.396472484 8712414.869342139 1.20471455702985 1.1223845146273266 1.1649557144665443 1.0614076857967087 1.1234229706237602 0.991516748223525 1.1280438315814387 0.9900441526617623 0.9965167553055303 1.0 23.054641223527277 -4.280865589930906 0.2725653026118967 0.9831582653415598 1.3573139468776654 0.6553598970344604 0.044851194593612684 5.297552812360512 0.3318440092036171 0.05558943403375405 0.669571815783114 5.2376251108923295e-05 4.280865589930906 0.37415568153610557 GNKHDDGTQS(ph)DSENAGAHR ddPTM_KYSE-520_SHP099_60min_R1 2 GNKHDDGTQSDSENAGAHR 19 1 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 GNKHDDGTQS(1)DSENAGAHR;GNKHDDGT(0.002)QS(0.998)DSENAGAHR 281.91 9.9863e-44 1436990000.0 834970.0 629750.0 672280.0 635510.0 637700.0 724320.0 691090.0 636200.0 846640.0 627010.0 True False 788652.5496285704 599495.8647259782 715616.2444860317 695908.6793269509 687883.3619833312 719799.2502071374 760952.1215884305 633993.1706901967 692911.518057577 621455.179206399 1.2690417201698814 0.9646646850566715 1.1515170658001062 1.1198051003704392 1.1068913495286357 1.158248051172933 1.224468227234295 1.0201752144053393 1.1149822887346887 1.0 19.24529081894319 -8.036148976849317 1.2358188535975545 1.0049410173710676 1.1299910277058687 0.18581532285986546 0.08259152888082555 0.8869076278899912 3.0259607869909266 0.07497906256974755 0.02327864332414443 9.20133882361945e-09 8.036148976849317 0.12505001033480112 GNKHDDGTQS(ph)DSENAGAHRR ddPTM_KYSE-520_SHP099_60min_R1 1 GNKHDDGTQSDSENAGAHRR 20 2 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 GNKHDDGTQS(0.935)DS(0.065)ENAGAHRR 108.5 0.00011438 248980000.0 59662.0 54081.0 67031.0 43477.0 51679.0 54140.0 47975.0 48655.0 93002.0 33991.0 True False 56352.429926751596 51482.86758276402 71351.92551339202 47609.04100816333 55745.84328671246 53802.09217778667 52824.78119087954 48486.22716116238 76115.18118963284 33689.86618459783 1.6726819162171245 1.5281410528813768 2.1179046874936045 1.4131561326868376 1.654676898425856 1.5969814745771727 1.5679724253410576 1.439193224914888 2.259290101438005 1.0 15.040027077667757 GNKS(ph)PSPPDGSPAATPEIR ddPTM_KYSE-520_SHP099_60min_R1 3 GNKSPSPPDGSPAATPEIR 19 1 O00499-6;O00499-11;O00499-2;O00499;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5;O00499-9;O00499-10 O00499-6;O00499-9 BIN1 Myc box-dependent-interacting protein 1 1 GNKS(0.946)PS(0.054)PPDGSPAATPEIR;GNKS(0.809)PS(0.191)PPDGSPAATPEIR;GNKS(0.996)PS(0.004)PPDGSPAATPEIR 169.41 5.3266e-09 2649570000.0 1836030.0 1822350.0 1609160.0 1315520.0 1322230.0 1692710.0 1467780.0 1658100.0 1881300.0 1823000.0 True False 1734181.7558649338 1734801.5705968828 1712889.0283470317 1440546.625274488 1426281.9785404098 1682145.1690111088 1616157.5265523538 1652348.438103448 1539703.3437136419 1806849.6382725404 0.9597819979768314 0.9601250341204153 0.9479975489187131 0.7972697864619988 0.7893750250873245 0.9309823758325254 0.8944615491621649 0.914491390486258 0.852148021119064 1.0 20.785045022873486 -5.034136689955015 24.274768497164413 0.8773369883252481 0.9584804934016627 0.24523786612866194 0.05863845880168568 551.0193722426252 391832.4580265253 0.016145080881166368 0.027988496093682112 9.244071799973678e-06 5.034136689955015 0.08114350507641466 GNKSPS(ph)PPDGSPAATPEIR ddPTM_KYSE-520_SHP099_60min_R1 3 GNKSPSPPDGSPAATPEIR 19 1 O00499-6;O00499-11;O00499-2;O00499;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5;O00499-9;O00499-10 O00499-6;O00499-9 BIN1 Myc box-dependent-interacting protein 1 1 GNKS(0.361)PS(0.639)PPDGSPAATPEIR;GNKS(0.269)PS(0.731)PPDGSPAATPEIR;GNKS(0.22)PS(0.78)PPDGSPAATPEIR 224.83 3.8169000000000003e-19 3509680000.0 1956780.0 1994570.0 1677440.0 1334290.0 1532140.0 1887220.0 1577280.0 1712150.0 2232910.0 1888200.0 True False 1848233.5126557795 1898747.863289393 1785570.4663988966 1461100.5204310848 1652710.7013158854 1875441.1599512857 1736726.8551693705 1706210.9512688129 1827469.8310804414 1871472.0169973718 0.9875827668645152 1.0145745413472882 0.9540994736665647 0.7807226114848912 0.8831073541604584 1.0021208668459185 0.9280004399722795 0.9116946103240661 0.9764879274083251 1.0 20.83574204596657 -9.195816029326974 14.463043073820062 0.9999999596906007 0.9349850492360113 0.07449415842946472 0.0654029812293421 0.0 0.0 0.06868352750475978 0.016658202273067087 6.370653298098356e-10 9.195816029326974 -0.0650149104545894 GNLELRPGGAHPGT(ph)CSPSRPGS ddPTM_KYSE-520_SHP099_60min_R1 4 GNLELRPGGAHPGTCSPSRPGS 22 2 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;Q5JTU8;B1AMJ5 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 GNLELRPGGAHPGT(0.496)CS(0.496)PS(0.008)RPGS;GNLELRPGGAHPGT(0.608)CS(0.148)PS(0.245)RPGS;GNLELRPGGAHPGT(0.787)CS(0.212)PS(0.001)RPGS;GNLELRPGGAHPGT(0.513)CS(0.241)PS(0.241)RPGS(0.005) 191.59 2.6401999999999997e-13 5926230000.0 2740450.0 2928820.0 2724090.0 2786350.0 2192520.0 2416120.0 2101900.0 2312050.0 2810930.0 2423170.0 True False 2588431.7755483664 2788115.090951552 2899689.200098106 3051163.866253322 2365058.85026767 2401040.098865794 2314380.5645671645 2304030.038186524 2300535.9697788744 2401702.598997734 1.0777486673947712 1.1608910662440362 1.207347321566038 1.270417023126268 0.9847425952133474 0.9997241539680156 0.9636416122183444 0.9593319502373149 0.9578771204806632 1.0 21.195626083600423 -5.780458446294163 24.336247813561613 0.975932396874433 1.1798178658437888 0.817790149242696 0.046602548088675 74.12887258856951 94852.6644055937 0.015340839617147854 0.01742597851732192 1.6578359525688165e-06 5.780458446294163 0.20388546896935578 GNLELRPGGAHPGTCS(ph)PSRPGS ddPTM_KYSE-520_SHP099_60min_R1 5 GNLELRPGGAHPGTCSPSRPGS 22 2 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;Q5JTU8;B1AMJ5 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 GNLELRPGGAHPGT(0.221)CS(0.733)PS(0.044)RPGS(0.003);GNLELRPGGAHPGT(0.208)CS(0.785)PS(0.007)RPGS;GNLELRPGGAHPGT(0.041)CS(0.864)PS(0.095)RPGS;GNLELRPGGAHPGT(0.059)CS(0.828)PS(0.112)RPGS(0.001);GNLELRPGGAHPGT(0.254)CS(0.693)PS(0.053)RPGS 124.62 6.1173e-05 4325210000.0 2674850.0 2610970.0 2431510.0 2382570.0 2134780.0 2311940.0 2114200.0 2049370.0 2677560.0 2206860.0 True False 2526470.738318722 2485535.082054132 2588249.025153553 2609008.736454209 2302775.0407633265 2297510.324889403 2327923.968603599 2042261.213796554 2191382.5997947706 2187308.9373110975 1.1550589380504077 1.136343860556639 1.1833029075149024 1.1927938902227115 1.0527891151920101 1.0503821777063547 1.0642867721581946 0.9336866772496922 1.0018624083750514 1.0 21.06072557153437 -6.266453679394127 1.0560552453485892 0.9848777732858239 1.1673286386320545 0.7994463585469926 0.036900137798675105 0.22302290836077548 0.5213065499276938 0.021050787956478616 0.018958221380212678 5.414349927091506e-07 6.266453679394127 0.18245086534623056 GNLLHFPS(ph)SQGEEEK ddPTM_KYSE-520_SHP099_60min_R1 1 GNLLHFPSSQGEEEK 15 0 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GNLLHFPS(0.5)S(0.5)QGEEEK 92.427 0.0031348 0.0 531280.0 492390.0 407450.0 402030.0 402210.0 433530.0 398670.0 385800.0 451650.0 431330.0 True False 501808.83931957756 468734.8453075424 433714.87894305063 440238.81032527337 433861.6387381456 430824.178460212 438971.4542442511 384461.74984639656 369641.7451699717 427508.7517696623 1.173797816401072 1.0964333323405093 1.0145169593550967 1.0297773051496963 1.014860250093561 1.0077552253066764 1.0268127902110522 0.8993073200371368 0.8646413521123217 1.0 18.705594428951024 -1.0000000000000013 0.3022874677763119 0.9344175980498851 3.0059313512729986 0.6867058661177646 0.046301107806262946 32.69413464178149 0.4664778586503061 0.05009779133403615 36.72038442896702 0.09999999999999969 1.0000000000000013 2.0715137532231136 GNLLHFPS(ph)SQGEEEKEK ddPTM_KYSE-520_SHP099_60min_R1 3 GNLLHFPSSQGEEEKEK 17 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GNLLHFPS(0.5)S(0.5)QGEEEKEK;GNLLHFPS(0.5)S(0.5)QGEEEKEK;GNLLHFPS(0.859)S(0.141)QGEEEKEK 150.29 3.4364999999999996e-06 3283680000.0 4874500.0 4647800.0 3959300.0 5137900.0 4524400.0 4478900.0 4194400.0 4756700.0 5182200.0 4541000.0 True False 4604101.767925164 4424512.711509968 4214522.813103986 5626204.471234033 4880444.539685407 4450945.523736407 4618410.885399176 4740200.11792213 4241243.112631079 4500770.272844543 1.022958624594566 0.9830567754602638 0.9364003398556833 1.2500536864055942 1.0843576196571583 0.9889297284492048 1.0261378842782578 1.053197526326147 0.9423371679778183 1.0 22.101740498258685 -9.395045240811413 10.856376215179518 1.000001665812956 1.0348359299837173 0.011506574302975303 0.08506409441813087 0.0 0.0 0.08539426090662557 0.02071115044350413 4.026750851475671e-10 9.395045240811413 0.0348342641707613 GNLLHFPSS(ph)QGEEEK ddPTM_KYSE-520_SHP099_60min_R1 3 GNLLHFPSSQGEEEK 15 0 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GNLLHFPS(0.001)S(0.999)QGEEEK;GNLLHFPS(0.004)S(0.996)QGEEEK;GNLLHFPS(0.085)S(0.915)QGEEEK 161.95 3.4385e-08 1486130000.0 1306810.0 1135120.0 922580.0 1159990.0 1067490.0 1130270.0 1116380.0 1134210.0 1215600.0 1110030.0 True False 1234318.6442388506 1080587.1313501436 982050.9829801912 1270235.100836289 1151495.3898127426 1123215.5656776305 1229234.585218845 1130275.6902366034 994877.6827822805 1100195.9977902733 1.121907957053071 0.9821769334922925 0.8926145749962966 1.1545534644622746 1.0466275028499499 1.0209231518143964 1.1172869085942356 1.0273403034611512 0.9042731338602186 1.0 20.069329129302776 -7.6221234451422655 7.046191330314975 0.9535995781427491 1.0445428462925195 0.20350801677676478 0.07451423499275912 0.36724117113706967 22.38831228694241 0.05195390172046732 0.019238956361313408 2.3871326608548264e-08 7.6221234451422655 0.09094326814977038 GNLLHFPSS(ph)QGEEEKEK ddPTM_KYSE-520_SHP099_60min_R1 12 GNLLHFPSSQGEEEKEK 17 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GNLLHFPS(0.219)S(0.781)QGEEEKEK;GNLLHFPS(0.267)S(0.733)QGEEEKEK;GNLLHFPS(0.005)S(0.995)QGEEEKEK;GNLLHFPS(0.069)S(0.931)QGEEEKEK;GNLLHFPS(0.09)S(0.91)QGEEEKEK;GNLLHFPS(0.162)S(0.838)QGEEEKEK;GNLLHFPS(0.168)S(0.832)QGEEEKEK;GNLLHFPS(0.299)S(0.701)QGEEEKEK;GNLLHFPSS(1)QGEEEKEK;GNLLHFPS(0.034)S(0.966)QGEEEKEK;GNLLHFPS(0.003)S(0.997)QGEEEKEK;GNLLHFPS(0.141)S(0.859)QGEEEKEK 252.55 4.7435000000000004e-24 21651680000.0 18516800.0 16643200.0 14634930.0 19148540.0 17125050.0 16475850.0 16659470.0 18177840.0 19305110.0 16191350.0 True False 17489636.191674333 15843635.690047486 15578321.00451594 20968411.48438154 18472694.00679416 16373018.10874374 18343571.808358975 18114785.315779764 15799788.666220013 16047907.235679677 1.0898390634256176 0.9872711411754655 0.9707384754742541 1.3066134528595725 1.151096758942088 1.0202587707100672 1.143050713028506 1.1287942439936811 0.9845388831194128 1.0 23.935881835854296 -7.768783193709016 24.713812514382052 0.9922693507763578 1.0990672404600874 0.18024220484079345 0.09164215576785818 298.4265909088608 1004232.0379161069 0.08718067462190002 0.024357128746500156 1.703008463479328e-08 7.768783193709016 0.10679788968372961 GNLLHFPSS(ph)QGEEEKEKLEGDHTIR ddPTM_KYSE-520_SHP099_60min_R1 4 GNLLHFPSSQGEEEKEKLEGDHTIR 25 2 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 GNLLHFPS(0.042)S(0.958)QGEEEKEKLEGDHTIR;GNLLHFPS(0.172)S(0.828)QGEEEKEKLEGDHTIR;GNLLHFPS(0.123)S(0.877)QGEEEKEKLEGDHTIR;GNLLHFPS(0.167)S(0.833)QGEEEKEKLEGDHTIR 131.2 3.0096999999999997e-05 9668500000.0 2361310.0 2272800.0 2464520.0 2335880.0 2001240.0 1941710.0 1630370.0 1757020.0 3215750.0 1612250.0 True False 2230323.4271452134 2163611.2764576464 2623386.9025714244 2557881.3328920705 2158726.2025019918 1929591.067649244 1795183.7104778404 1750925.3077115521 2631850.8624606105 1597966.7193115214 1.3957258309523122 1.3539776832084658 1.6417030911017358 1.6007100160347052 1.3509206270779355 1.207528945584425 1.123417458438239 1.0957207597326761 1.6469997970887245 1.0 20.607805931041746 -6.015554483504671 4.015086347800614 1.2178640136832768 1.4977507986541168 0.35745275446683455 0.17858822970234095 0.2536069887565139 9.307786710941272 0.05951668773500906 0.06351524021082464 9.648182649581199e-07 6.015554483504671 0.27988678497083996 GNLT(ph)PLTGR ddPTM_KYSE-520_SHP099_60min_R1 3 GNLTPLTGR 9 0 O75683 O75683 SURF6 Surfeit locus protein 6 1 GNLT(1)PLTGR;GNLT(1)PLTGR;GNLT(1)PLTGR 163.45 0.00059036 2344280000.0 1376810.0 1512800.0 1202260.0 1065430.0 1092060.0 1367530.0 1195250.0 1556870.0 1604400.0 1581350.0 True False 1300435.6046973085 1440122.8172409048 1279759.6032840137 1166688.14686679 1177998.9090285657 1358994.7380105027 1316077.534515868 1551469.58134619 1313081.4036326837 1567340.4692716836 0.829708432974744 0.9188321526018564 0.8165166588716338 0.7443744162421392 0.7515909479297512 0.8670705342292376 0.8396883512664142 0.9898740010631714 0.8377767494530721 1.0 20.579887176049567 -7.121057814487647 5.3399687853286455 0.9348413406515669 0.8214303568122803 0.42942657700901354 0.06266008940111815 0.24486555852863914 9.646989734325969 0.03150101267534172 0.017933805066442994 7.56732150029826e-08 7.121057814487647 -0.1134109838392866 GNMPNQGS(ph)LNAMWYAEVK ddPTM_KYSE-520_SHP099_60min_R1 1 GNMPNQGSLNAMWYAEVK 18 0 Q8TC05-4 Q8TC05-4 MDM1 Nuclear protein MDM1 1 GNMPNQGS(0.963)LNAMWY(0.037)AEVK 51.695 0.046544 35017000.0 96142.0 103510.0 85903.0 72211.0 74108.0 93031.0 74335.0 91171.0 118650.0 97404.0 True False 90808.81160567464 98537.22422832255 91440.44482965967 79073.91172897117 79939.8779831593 92450.35902090262 81849.50723968793 90854.74908047127 97106.15092309764 96541.07633916521 0.940623567181371 1.0206766690910356 0.9471662042425738 0.8190701277368306 0.8280400531512299 0.9576271834396044 0.8478205375723873 0.9410994006456184 1.0058532036865553 1.0 16.558855291069065 -7.6388256812358994 4.095873307935898 1.0025639691860144 0.9089397553871381 0.27796298395169405 0.05985505171488375 0.32622662228787913 9.580098663527657 0.0511179561933747 0.017107628220134494 2.297070469943535e-08 7.6388256812358994 -0.09362421379887631 GNPTVEVDLFT(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 GNPTVEVDLFTSK 13 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798 P06733 ENO1 Alpha-enolase;Enolase 1 GNPTVEVDLFT(0.5)S(0.5)K 157.58 8.5957e-06 98809000.0 279820.0 311640.0 313150.0 242630.0 295890.0 256640.0 275890.0 325910.0 333950.0 311890.0 True False 264297.8267926592 296668.34661882365 333336.1500577153 265689.4822506303 319174.8596161957 255038.21456422575 303779.65362692566 324779.49427796574 273313.0981944249 309126.89724674844 0.8549816568750205 0.9596976169369686 1.0783149348264016 0.8594835474266546 1.032504328995438 0.8250275755223315 0.9827021082039504 1.0506348595694124 0.8841453158191647 1.0 18.237839663528614 -12.560012343183892 0.006599928258545259 1.9541247847928145 0.046211895570286494 0.03339934359029528 0.0846679377076257 113492.94603272823 72.63388465898657 11345.967933520045 9707.600710626206 2.754150425879703e-13 12.560012343183892 -1.9079128892225279 GNPTVEVDLFTS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 5 GNPTVEVDLFTSK 13 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8YEG5;A0A2R8Y798 P06733 ENO1 Alpha-enolase;Enolase 1 GNPTVEVDLFT(0.158)S(0.842)K;GNPTVEVDLFT(0.203)S(0.797)K;GNPTVEVDLFT(0.022)S(0.978)K;GNPTVEVDLFT(0.022)S(0.978)K;GNPTVEVDLFT(0.012)S(0.988)K 251.02 2.6e-16 1069325000.0 3500150.0 3673820.0 3647350.0 3216430.0 3469090.0 3287530.0 3298170.0 3882550.0 4183700.0 3966090.0 True False 3305989.7021239637 3497324.172683752 3882464.016966341 3522118.5401450545 3742087.6465779427 3267011.305822662 3631581.210637274 3869082.34024398 3424045.542494431 3930953.528171333 0.841014699978379 0.8896885062670014 0.9876646948742869 0.8959959752522266 0.9519541810301557 0.8310989388222214 0.9238423157667484 0.9842605140244088 0.8710470673224382 1.0 21.90644787761097 -13.999999999370019 0.19289083383104932 1.381206755827374 0.8962848327341311 0.22312360274965315 0.05148670076716701 224.4106962437268 2.202858462975807 32.94394776819789 0.13610647297052447 1.0000000014505858e-14 13.999999999370019 -0.4849219230932429 GNRES(ph)DGFREEK ddPTM_KYSE-520_SHP099_60min_R1 4 GNRESDGFREEK 12 2 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 GNRES(1)DGFREEK;GNRES(1)DGFREEK;GNRES(1)DGFREEK;GNRES(1)DGFREEK 100.23 0.0010752000000000001 3914050000.0 4901210.0 4006520.0 4366890.0 3565950.0 4338340.0 4591990.0 3305650.0 3947450.0 4574360.0 3750820.0 True False 4629330.110980089 3814040.7652908736 4648386.716671038 3904856.8158580405 4679742.676221995 4563329.687097792 3639817.3620350403 3933757.2172917603 3743771.534231617 3717590.652893801 1.2452500942718323 1.025944252986002 1.2503761577549424 1.0503729916628852 1.2588106419353209 1.2274965463305274 0.9790796518174422 1.0581469517709523 1.0070424325274856 1.0 21.82593649193428 -6.765888659659843 24.999973320336125 1.015912819927763 1.170920735421068 0.5138706558728032 0.07860391294931016 97.99547003554387 550616.1496189131 0.030942764033004787 0.021662235314386023 1.714396772115069e-07 6.765888659659843 0.15500791549330506 GNRGS(ph)GGGGGGGGQGSTNYGK ddPTM_KYSE-520_SHP099_60min_R1 7 GNRGSGGGGGGGGQGSTNYGK 21 1 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK;GNRGS(1)GGGGGGGGQGSTNYGK 289.43 7.0047e-44 6264390000.0 2194927.0 2131929.0 2178333.0 1760950.0 1769818.0 1801136.0 1657188.0 1725545.0 2433998.0 1791703.0 True False 2073170.0238315056 2029507.9307493311 2318751.830636034 1928310.158551077 1909092.6077130558 1789894.4421265228 1824712.7356362971 1719559.4871402285 1992045.3192964012 1775829.9053438425 1.1674372740277121 1.1428504073741064 1.3057285631120559 1.0858642219890484 1.0750424925091069 1.0079199796896974 1.027526752503354 0.9683131711915175 1.1217545741863686 1.0 20.760061971694125 -5.485347080723631 4.585787011657686 1.0331328238787727 1.2002564764442336 0.6512399579286272 0.05606419209815246 0.1267591814367119 6.182706019822279 0.0161460103218635 0.023415739477855274 3.2707919430023266e-06 5.485347080723631 0.1671236525654609 GNS(ph)DGYIIPINK ddPTM_KYSE-520_SHP099_60min_R1 1 GNSDGYIIPINK 12 0 H0Y3V3;H0Y5C0;B1ALU1;A0A6I8PRM6;B1ALU3;A0A6I8PTT2;A0A6I8PRJ0;O95490-2;O95490-5;O95490;O95490-7;O95490-6 H0Y3V3 ADGRL2;LPHN2 Latrophilin-2 1 GNS(1)DGYIIPINK 127.57 8.4043e-05 464290000.0 1156400.0 1275600.0 1085400.0 1692700.0 1614100.0 1405400.0 1302700.0 1892000.0 2352700.0 1127800.0 True False 1092252.1867737512 1214318.2612853642 1155366.6207014027 1853573.6990711857 1741120.487027277 1396628.3772933383 1434389.6291268119 1885437.0935961185 1925508.9867405996 1117808.569415122 0.9771370668103369 1.0863383002339475 1.0335997167260333 1.6582210494602332 1.557619555500719 1.2494343087959192 1.2832158102682434 1.6867262831798182 1.7225749018439676 1.0 20.09224170956036 -5.2449815045450805 24.266459189751203 1.4687654811562711 1.037756256836734 0.4409263295984057 0.21541650900183826 519.3172669378686 765709.8085730746 0.05908915576930033 0.10192646699035413 5.688771573035705e-06 5.2449815045450805 -0.43100922431953714 GNS(ph)LPCVLEQK ddPTM_KYSE-520_SHP099_60min_R1 1 GNSLPCVLEQK 11 0 Q08495;Q08495-4 Q08495 DMTN Dematin 1 GNS(1)LPCVLEQK 66.393 0.058379999999999994 0.0 352320.0 336840.0 255080.0 248360.0 270970.0 298330.0 202510.0 278550.0 329410.0 312080.0 True False 332776.1072674928 320657.7007928522 271522.8649424306 271964.05972784327 292293.7973916 296468.0118101051 222981.68710713953 277583.77506405895 269597.4477503383 309315.21399456606 1.075847847798844 1.0366696699195836 0.8778193010163431 0.8792456608119542 0.9449706453712777 0.9584656634940477 0.7208881976010943 0.8974139082241698 0.8715945273712741 1.0 18.23871827008419 -4.705949301846857 4.57173769390609 0.8872749355388843 1.0651359885737317 0.4600360275635915 0.07046120369331584 0.16811124821668877 7.1047999998258495 0.018357514543217265 0.05064890473804577 1.9681160278872226e-05 4.705949301846857 0.17786105303484745 GNS(ph)PPSSGEACR ddPTM_KYSE-520_SHP099_60min_R1 8 GNSPPSSGEACR 12 0 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 GNS(0.955)PPS(0.042)S(0.003)GEACR;GNS(0.858)PPS(0.115)S(0.027)GEACR;GNS(0.99)PPS(0.002)S(0.008)GEACR;GNS(0.998)PPS(0.001)SGEACR;GNS(0.999)PPSSGEACR;GNS(1)PPSSGEACR;GNS(0.997)PPS(0.001)S(0.002)GEACR;GNS(0.992)PPS(0.004)S(0.004)GEACR 211.53 2.51e-09 3527860000.0 1185168.0 1077589.0 1063596.0 926134.0 996580.0 1078636.0 1006513.0 1048467.0 1202195.0 1047256.0 True False 1119424.3684661668 1025820.006945935 1132157.0999737699 1014153.4969076589 1075005.1762354518 1071903.8326242904 1108261.156660256 1044830.1126910375 983906.69286973 1037978.1265928389 1.0784662410379253 0.9882867284623685 1.0907331002148122 0.9770470792449314 1.03567228315702 1.0326844132475244 1.0677114750944907 1.00660128178297 0.9479069622588308 1.0 19.98534461129691 -7.527193324993548 8.24249211322404 0.9747947485443719 1.0361154078377153 0.34300083059797726 0.035947847392985004 0.12794179648932624 81.69165228399575 0.021341739230483266 0.0085875106419641 2.970343497164441e-08 7.527193324993548 0.061320659293343405 GNS(ph)PPSSGEACREEK ddPTM_KYSE-520_SHP099_60min_R1 3 GNSPPSSGEACREEK 15 1 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 GNS(0.998)PPS(0.002)S(0.001)GEACREEK;GNS(0.995)PPS(0.002)S(0.003)GEACREEK;GNS(0.988)PPS(0.006)S(0.006)GEACREEK 130.25 3.0108e-05 1008530000.0 1965640.0 2262950.0 2215710.0 1374950.0 1719100.0 1535820.0 1165290.0 1239220.0 2820250.0 1482790.0 True False 1856602.0307938063 2154234.4852428013 2358538.2118613464 1505624.834606208 1854383.3896590003 1526234.377696498 1283088.885334445 1234921.4350561223 2308163.692716952 1469653.6341931636 1.26329223947592 1.4658110150052266 1.6048258970598732 1.024475971464387 1.2617826040875628 1.0384993730406398 0.8730552937657707 0.8402805983153243 1.5705494403680553 1.0 20.487044752201093 -5.271751047881392 24.79224111808888 1.076647808381809 1.4467598491607077 0.37602819050788905 0.21085383692812465 625.4058781143729 1503656.0564852597 0.059491273115979106 0.08938462266022078 5.348708774068931e-06 5.271751047881392 0.3701120407788987 GNS(ph)RPGT(ph)PSAEGGSTSSTLR ddPTM_KYSE-520_SHP099_60min_R1 4 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 2 GNS(0.999)RPGT(0.975)PS(0.02)AEGGS(0.002)T(0.001)S(0.001)S(0.001)T(0.001)LR;GNS(1)RPGT(0.922)PS(0.066)AEGGS(0.005)T(0.004)S(0.001)S(0.001)T(0.001)LR;GNS(1)RPGT(0.832)PS(0.168)AEGGSTSSTLR;GNS(1)RPGT(0.988)PS(0.012)AEGGSTSSTLR 91.541 0.0013105 6936610000.0 2975960.0 2700220.0 2709820.0 2712520.0 2683210.0 2597150.0 2762040.0 2861620.0 3031340.0 2506630.0 True False 2810877.5663708155 2570497.3780871513 2884499.333065297 2970317.0852511255 2894363.361623478 2580940.2234861245 3041253.9581127013 2851693.7081271317 2480925.069862817 2484423.2083286317 1.1314004622673777 1.0346455344121603 1.1610338059133702 1.1955761302235515 1.1650041554597412 1.0388488623169898 1.2241287828568754 1.1478292822926803 0.9985919715875751 1.0 21.24447951927192 -7.763959200826676 24.974595046639532 0.9992958948375216 1.1371546172602667 0.48282697007678477 0.05713455846121219 58.26555431951171 577426.9545687311 0.0485714994188995 0.014791407327491115 1.722030341062411e-08 7.763959200826676 0.1378587224227451 GNS(ph)RPGTPS(ph)AEGGSTSSTLR ddPTM_KYSE-520_SHP099_60min_R1 2 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 2 GNS(0.597)RPGT(0.404)PS(0.94)AEGGS(0.038)T(0.008)S(0.008)S(0.005)TLR;GNS(0.959)RPGT(0.044)PS(0.539)AEGGS(0.258)T(0.049)S(0.061)S(0.049)T(0.04)LR 227.43 4.8589e-22 1372750000.0 1934610.0 1654300.0 1616500.0 1660610.0 1597280.0 1637360.0 1612570.0 1662490.0 1835570.0 1628370.0 True False 1827293.326750577 1574824.944845077 1720702.1764914503 1818433.875119396 1722976.8487199869 1627140.6288921456 1775584.3127665778 1656723.2102180847 1502276.7589541543 1613943.9086526916 1.132191346275465 0.9757618814396897 1.0661474461822404 1.1267020281004754 1.067556833594245 1.0081766907565397 1.1001524298628336 1.0265060646383337 0.9308110095401294 1.0 20.622159009083123 -7.55990436125063 5.6849232942734504 0.9673886474353695 1.0644355113000186 0.41682812435080074 0.04818052432240354 0.18275984920811758 15.457423155075421 0.03258915730602458 0.012138747875013659 2.7548352963424012e-08 7.55990436125063 0.09704686386464911 GNS(ph)RPGTPSAEGGS(ph)TSSTLR ddPTM_KYSE-520_SHP099_60min_R1 4 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 2 GNS(0.938)RPGT(0.063)PS(0.264)AEGGS(0.586)T(0.139)S(0.01)ST(0.001)LR;GNS(0.841)RPGT(0.167)PS(0.309)AEGGS(0.582)T(0.084)S(0.013)S(0.003)T(0.002)LR;GNS(0.826)RPGT(0.174)PS(0.042)AEGGS(0.846)T(0.107)S(0.004)STLR;GNS(0.821)RPGT(0.179)PS(0.105)AEGGS(0.854)T(0.023)S(0.017)S(0.002)TLR 215.29 3.0552e-18 3487690000.0 4231380.0 3643120.0 3291690.0 3317410.0 3333550.0 3436890.0 3484360.0 3525130.0 3839710.0 3330030.0 True False 3996656.9163530893 3468099.046765394 3503877.6042902134 3632695.648984311 3595881.419695051 3415439.094660388 3836593.112876565 3512902.1468015257 3142515.455212203 3300528.5249241334 1.2109142175782157 1.0507708146061583 1.0616110655704012 1.10064058575825 1.0894865451216504 1.0348158087010915 1.1624178018472826 1.0643453375038696 0.9521249192307578 1.0 21.65426563598705 -1.0000000113189433 0.07758113461038338 0.9114602514708104 1.4920595620694415 0.3447588845957853 0.057322467860312164 279.48750911675916 1.589329456186855 1.8592430295393483 17.45972475009392 0.09999999739371701 1.0000000113189433 0.580599310598631 GNS(ph)RPGTPSAEGGSTSSTLR ddPTM_KYSE-520_SHP099_60min_R1 1 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNS(0.352)RPGT(0.335)PS(0.064)AEGGS(0.092)T(0.044)S(0.037)S(0.037)T(0.037)LR 72.421 0.019969 1083500000.0 160230.0 164230.0 132150.0 121170.0 117040.0 139680.0 135380.0 163310.0 166510.0 152920.0 True False 151341.7224894138 156340.14428574417 140668.60044747606 132685.96036891112 126250.38213349384 138808.20530833464 149065.53158147537 162743.51572684036 136275.98137551628 151565.2477699599 0.9985252207624444 1.0315039007030915 0.9281058983981448 0.8754378877821447 0.8329771104594634 0.9158313488789499 0.9835073262158452 1.07375218344146 0.8991241948969125 1.0 17.209579471894276 -6.838927614124868 5.6984990884049385 0.9967129361877085 0.9280634908602515 0.15829718691754235 0.06569416259323874 0.39295087654278815 21.5347310620348 0.03057177125487102 0.02057380422598162 1.4490133471924524e-07 6.838927614124868 -0.06864944532745698 GNSPPS(ph)SGEACREEK ddPTM_KYSE-520_SHP099_60min_R1 1 GNSPPSSGEACREEK 15 1 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 GNS(0.276)PPS(0.362)S(0.362)GEACREEK 64.798 0.025848000000000003 251170000.0 398770.0 416890.0 465350.0 307200.0 331890.0 326190.0 260250.0 268340.0 541350.0 303780.0 True False 376649.4331717132 396861.97863535286 495347.20558632555 336396.19563695224 358007.85480421426 324154.12721596303 286558.60979523545 267409.19117102714 443054.4863229584 301088.7455372634 1.25095819340447 1.318089714470036 1.6451867196245644 1.1172659244924155 1.1890442937858214 1.076606588657247 0.9517413521515049 0.888140772893592 1.4715079619876559 1.0 18.19982925669059 -5.412790720519196 8.910830390401793 1.0887440652602494 1.3958109506074183 0.3850003532257006 0.1768744777124621 0.3484176990850192 25.87280360302453 0.04981370954858375 0.07392116145745621 3.865532059128328e-06 5.412790720519196 0.30706688534716897 GNSRPGT(ph)PSAEGGSTS(ph)STLR ddPTM_KYSE-520_SHP099_60min_R1 1 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 2 GNS(0.208)RPGT(0.792)PS(0.007)AEGGS(0.002)T(0.009)S(0.887)S(0.078)T(0.017)LR 238.93 5.3704e-26 966580000.0 785590.0 725130.0 625300.0 695140.0 672490.0 668550.0 700550.0 745810.0 728970.0 661220.0 True False 742011.7566651604 690293.6663576792 665607.8385153739 761205.8965985379 725411.1370553089 664377.3314639685 771368.4307091336 743222.9591833618 596607.4238382688 655362.1052213764 1.132216450651376 1.0533011610802598 1.0156336980920442 1.1615042898176242 1.1068859967273672 1.0137560993697474 1.1770110364385062 1.1340645930882847 0.910347759025126 1.0 19.321932729267797 -7.7595267287226015 24.999947413310412 0.9551738535085077 1.0970404139451477 0.5033531353961697 0.05722867341647508 39.84353643186959 520845.7772317617 0.04386430554919955 0.014669704383252172 1.739695624900921e-08 7.7595267287226015 0.14186656043664003 GNSRPGT(ph)PSAEGGSTSSTLR ddPTM_KYSE-520_SHP099_60min_R1 2 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNSRPGT(0.995)PS(0.005)AEGGSTSSTLR;GNSRPGT(0.655)PS(0.077)AEGGS(0.132)T(0.132)S(0.002)S(0.002)TLR 302.31 5.3597e-44 8974100000.0 2196100.0 2547780.0 1991620.0 1675240.0 1643600.0 2425800.0 1969900.0 2432730.0 2461490.0 2270740.0 True False 2074277.9551831838 2425380.824504253 2120003.0119046704 1834454.30592073 1772941.9691952346 2410659.682395181 2169036.7163713137 2424291.4274334493 2014545.4651133216 2250623.0102089862 0.9216461156640233 1.0776486392890114 0.9419627375567502 0.8150873325294884 0.7877560840500801 1.0711077206001436 0.9637494624965659 1.0771645968412704 0.8951056911687119 1.0 21.101892988243858 -6.289752593709178 24.99162569917583 1.0038935176598294 0.9148333595267129 0.21669026701536032 0.08759968669330832 1324.5025467520456 1169113.251900724 0.03317874467339545 0.029266970342701905 5.131536310413616e-07 6.289752593709178 -0.08906015813311652 GNSRPGTPSAEGGS(ph)TSSTLR ddPTM_KYSE-520_SHP099_60min_R1 3 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNSRPGTPSAEGGS(0.487)T(0.487)S(0.021)S(0.003)T(0.003)LR;GNSRPGTPSAEGGS(0.424)T(0.424)S(0.152)STLR;GNSRPGT(0.003)PS(0.003)AEGGS(0.495)T(0.495)S(0.002)STLR 334.3 1.2431e-64 3096740000.0 1747780.0 1878030.0 1494280.0 1289890.0 1325300.0 2004480.0 1503800.0 1737640.0 1886860.0 1806760.0 True False 1650827.1592869475 1787806.6198195003 1590603.6797325346 1412480.7577804313 1429593.5700744994 1991969.2967958993 1655818.779673677 1731612.5324082263 1544253.787869838 1790753.5120380085 0.9218617460133781 0.9983543842306055 0.888231500896129 0.7887633603872846 0.7983195679719859 1.1123637526913976 0.9246491873631643 0.9669742489783111 0.862348602132498 1.0 20.77213534080047 -6.230961979038402 24.99964473382253 0.9681645206713012 0.8812189578239278 0.25085084187591367 0.08108083486454738 1184.9912550080148 972011.3187870248 0.028541329660262276 0.02853873461875374 5.875407874174628e-07 6.230961979038402 -0.08694556284737343 GNSRPGTPSAEGGSTS(ph)STLR ddPTM_KYSE-520_SHP099_60min_R1 2 GNSRPGTPSAEGGSTSSTLR 20 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 GNSRPGTPS(0.001)AEGGS(0.182)T(0.046)S(0.758)S(0.011)T(0.001)LR;GNSRPGT(0.028)PS(0.011)AEGGS(0.086)T(0.086)S(0.699)S(0.086)T(0.002)LR 229.41 2.4603999999999995e-19 2415700000.0 1604160.0 1800460.0 1474160.0 1204880.0 1218740.0 1978230.0 1418120.0 1642580.0 1821410.0 1763820.0 True False 1515174.046986322 1713963.1990544437 1569186.7123393954 1319391.4329396186 1314647.9043179632 1965883.1327828416 1561477.4091174619 1636882.2733610536 1490687.8580096022 1748193.9270311955 0.8667082201569074 0.9804193759928667 0.8976044865938916 0.7547168609493029 0.752003472835828 1.1245223441093453 0.8931946193001494 0.9363276282173267 0.8527016568128152 1.0 20.73743380110077 -6.231393300150772 24.948339343697654 0.953110177281556 0.8548388002924056 0.2659774336875511 0.09158274766029523 1161.2142996962746 964198.4518426051 0.03202000542445983 0.03201581907184475 5.869575588563579e-07 6.231393300150772 -0.09827137698915045 GNVFS(ph)SPTAAGT(ph)PNKETAGLK ddPTM_KYSE-520_SHP099_60min_R1 1 GNVFSSPTAAGTPNKETAGLK 21 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;E9PGZ1;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 2 GNVFS(0.537)S(0.458)PT(0.005)AAGT(0.998)PNKET(0.002)AGLK 88.573 0.0020166 1396400000.0 1592300.0 1617500.0 1356500.0 1525500.0 1390300.0 1314700.0 1400400.0 1353400.0 1769300.0 1409700.0 True False 1503971.944828644 1539792.8720830015 1443942.1604767395 1670483.0613417004 1499708.7002750887 1306494.4696367972 1541966.0985869248 1348705.3712859356 1448039.720423404 1397211.1547300054 1.0764099182412188 1.1020473654753697 1.033445915163599 1.1955838283187064 1.0733586653657154 0.9350730311691949 1.1036027685342173 0.9652838561445332 1.0363785856714123 1.0 20.41411863506926 -6.013802188566162 24.82439171506033 1.0110184957634187 1.1016810510570647 0.389936054717411 0.055953810875620166 619.5191824097075 1114258.3290392892 0.017274812892518775 0.0179695885326058 9.687189856469304e-07 6.013802188566162 0.09066255529364597 GNVFSS(ph)PTAAGT(ph)PNKETAGLK ddPTM_KYSE-520_SHP099_60min_R1 3 GNVFSSPTAAGTPNKETAGLK 21 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;E9PGZ1;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 2 GNVFS(0.103)S(0.891)PT(0.006)AAGT(1)PNKETAGLK;GNVFS(0.393)S(0.6)PT(0.007)AAGT(0.996)PNKET(0.004)AGLK;GNVFS(0.447)S(0.553)PTAAGT(1)PNKETAGLK 183.47 4.1065e-13 9182500000.0 5781100.0 4980500.0 4731600.0 4628400.0 4354700.0 4420700.0 4378100.0 4493400.0 5783600.0 4783100.0 True False 5460410.858662871 4741229.304117094 5036606.506827675 5068281.744420794 4697390.115146319 4393108.771524596 4820681.0741384 4477813.444167441 4733444.0326913465 4740725.455195495 1.1518091292712704 1.0001062809745809 1.0624126105653124 1.0690941275382908 0.9908589222348484 0.9266743693647275 1.016865692750733 0.9445418188602502 0.9984640699882402 1.0 22.176676415479232 -5.81456059381388 4.7828422125284655 0.9747706895393482 1.065485069269563 0.5252111301560352 0.04244870568435167 0.16101719827147482 7.682623338086045 0.012634725878002096 0.014768240451908743 1.5326373541834495e-06 5.81456059381388 0.09071437973021479 GNVFSS(ph)PTAAGTPNK ddPTM_KYSE-520_SHP099_60min_R1 1 GNVFSSPTAAGTPNK 15 0 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;E9PGZ1;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 1 GNVFS(0.023)S(0.674)PT(0.303)AAGTPNK 153.48 3.3239e-06 353690000.0 503220.0 507700.0 375230.0 303890.0 365450.0 487310.0 412620.0 468940.0 485990.0 521680.0 True False 475305.3834558 483309.32992676366 399417.92618922726 332771.6142321399 394208.8358739346 484268.5175315331 454331.6563831309 467313.3565914185 397746.46681092534 517058.3210608985 0.9192490751924658 0.934728850190654 0.7724813815387458 0.6435862274672618 0.7624069081126057 0.9365839360981806 0.8786855135624445 0.9037923529256556 0.7692487493380447 1.0 18.979967491456605 -6.25911162475786 24.90903881855308 0.890463094482108 0.8026752110428944 0.18854824758313105 0.09381093009210856 411.91188671211466 4407832.297833069 0.03468608134612715 0.033141757217244674 5.506661429721265e-07 6.25911162475786 -0.08778788343921362 GNVVPS(ph)PLPTR ddPTM_KYSE-520_SHP099_60min_R1 10 GNVVPSPLPTR 11 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(1)PLPTR;GNVVPS(0.998)PLPT(0.002)R;GNVVPS(0.99)PLPT(0.01)R;GNVVPS(1)PLPTR;GNVVPS(0.974)PLPT(0.026)R;GNVVPS(0.999)PLPT(0.001)R;GNVVPS(0.892)PLPT(0.108)R;GNVVPS(0.985)PLPT(0.015)R;GNVVPS(0.997)PLPT(0.003)R;GNVVPS(0.995)PLPT(0.005)R 127.78 0.00016915 119662100000.0 24401150.0 25885540.0 19032660.0 16763050.0 17415410.0 25100030.0 19460690.0 24920970.0 25102440.0 25931670.0 True False 23047569.567013457 24641959.803412348 20259535.716932688 18356205.232005253 18785903.686871756 24943371.40238659 21427966.46323166 24834524.9716681 20544469.67701646 25701935.578333948 0.896725053907689 0.958758912468245 0.7882494162817426 0.7141954416646756 0.730913966756176 0.970486107023519 0.83371022380489 0.966251156298242 0.7993355058571894 1.0 24.615373675152604 -6.270938355619971 24.994389993215556 0.9068318934930901 0.8182073396210128 0.22582785047927378 0.08855558995565843 1256.3532543475408 3305797.544831817 0.03295167223368891 0.029427148786645152 5.358727146550799e-07 6.270938355619971 -0.08862455387207735 GNVVPS(ph)PLPTRR ddPTM_KYSE-520_SHP099_60min_R1 8 GNVVPSPLPTRR 12 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 GNVVPS(0.782)PLPT(0.218)RR;GNVVPS(0.998)PLPT(0.002)RR;GNVVPS(0.999)PLPT(0.001)RR;GNVVPS(1)PLPTRR;GNVVPS(1)PLPTRR;GNVVPS(1)PLPTRR;GNVVPS(1)PLPTRR;GNVVPS(1)PLPTRR 108.06 0.00024815 36224740000.0 7354850.0 7504120.0 7211970.0 4898070.0 5431220.0 5946210.0 4590070.0 4935080.0 7921290.0 5721690.0 True False 6946861.808970022 7143610.811286242 7676865.125759996 5363581.100141562 5858626.114585389 5909097.497755392 5054079.07036624 4917961.359336326 6482983.415470916 5671000.278007467 1.2249799803238302 1.2596738601811854 1.3537056514582466 0.9457910134375943 1.0330851397249174 1.0419850481530186 0.8912147456536564 0.8672123290856679 1.1431816430361281 1.0 22.43517179635117 -5.266032721108649 24.995095220476667 0.9833711187216211 1.277475238971952 0.7344555515161271 0.08000291326744452 189.98925659233976 1033845.3069469504 0.022668419171166847 0.03490398372666032 5.419600558926024e-06 5.266032721108649 0.29410412025033084 GNYDEGFGHRPHK ddPTM_KYSE-520_SHP099_60min_R1 4 GNYDEGFGHRPHK 13 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 0 ;;; 158.42 4.8854e-06 10131700000.0 6701400.0 6269100.0 5839290.0 5884370.0 7149700.0 6131900.0 6338700.0 6054500.0 5778530.0 4018620.0 False True 6329659.983090292 5967923.025889048 6215699.976594344 6443618.755599656 7712340.713771706 6093628.537587187 6979477.655750454 6033498.352630919 4729294.616887045 3983018.153239049 1.5891617209785798 1.4983419096485526 1.5605502504525732 1.6177728816926458 1.9363056900707112 1.5299022758989334 1.7523087737058494 1.5148056374597212 1.1873645649947924 1.0 21.92543062435348 -7.808394854719994 2.4225415234473573 1.0072960317963333 1.6392601942861378 0.7692066720904606 0.12009155177959076 0.12952238065181856 1.4675593494014816 0.11707387751228174 0.03294485536958583 1.5545516114164653e-08 7.808394854719994 0.6319641624898045 GNYPGPS(ph)SPVVVR ddPTM_KYSE-520_SHP099_60min_R1 2 GNYPGPSSPVVVR 13 0 H3BV44;H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BP49;H3BU05 H3BV44 MYO9A Unconventional myosin-IXa 1 GNYPGPS(0.579)S(0.421)PVVVR;GNYPGPS(0.661)S(0.339)PVVVR 175.34 2.9543000000000002e-06 0.0 772500.0 818910.0 697300.0 512840.0 595840.0 802490.0 685010.0 916740.0 1025600.0 924030.0 True False 729647.8850594292 779568.3343910296 742249.0737194469 561580.159409031 642729.2181341498 797481.3622414493 754257.4958533491 913560.0429087253 839376.8932720522 915843.8130844627 0.7966946706797683 0.8512022718868711 0.8104537729196778 0.613183330373429 0.701789113986049 0.8707613141542317 0.8235656397711435 0.9975063759310162 0.9165065934606489 1.0 19.804742058238105 -6.959142317391807 1.53240863899784 0.9725270122674308 0.7608268417974884 0.6015175129006654 0.07221347093746397 0.3111748583337715 1.4317993614477162 0.051926841243138774 0.025954884763266132 1.0986457565239524e-07 6.959142317391807 -0.21170017046994238 GNYPGPSS(ph)PVVVR ddPTM_KYSE-520_SHP099_60min_R1 1 GNYPGPSSPVVVR 13 0 H3BV44;H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BP49;H3BU05 H3BV44 MYO9A Unconventional myosin-IXa 1 GNYPGPS(0.081)S(0.919)PVVVR 128.74 0.00057942 0.0 272040.0 311570.0 232230.0 207910.0 241120.0 296680.0 255330.0 296660.0 356880.0 366060.0 True False 256949.39890170476 296601.7095238956 247199.91738113755 227669.70388957908 260094.7722148672 294828.3100721417 281141.2481806623 295630.95570096467 292079.58821268537 362816.99319037027 0.7082066268237973 0.8174967410312793 0.6813350036541195 0.62750562449571 0.7168759377221213 0.8126088788720134 0.7748844554068264 0.8148211391682169 0.8050328228684456 1.0 18.46888250311841 -8.376658012789104 0.4451576234764116 1.0167475750160666 0.7110406777940822 0.7171135682842494 0.05175648549757999 1.0668205613963877 0.43663704839555123 0.09913834926542514 0.036573392626819336 4.200896553336841e-09 8.376658012789104 -0.3057068972219844 GPAFNMAS(ph)PESDFGINLK ddPTM_KYSE-520_SHP099_60min_R1 7 GPAFNMASPESDFGINLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPAFNMAS(0.979)PES(0.021)DFGINLK;GPAFNMAS(0.985)PES(0.015)DFGINLK;GPAFNMAS(0.937)PES(0.063)DFGINLK;GPAFNMAS(0.999)PES(0.001)DFGINLK;GPAFNMAS(0.98)PES(0.02)DFGINLK;GPAFNMAS(1)PESDFGINLK;GPAFNMAS(0.938)PES(0.062)DFGINLK 215.75 3.0555000000000004e-18 3339570000.0 3328120.0 3739970.0 3060870.0 2726120.0 2797080.0 3831760.0 3134740.0 3795060.0 4717470.0 4358800.0 True False 3143502.549157259 3560296.2273905845 3258178.5777651616 2985209.6251621335 3017194.282791807 3807844.5645207944 3451630.111314183 3781895.8226336595 3860896.365741136 4320184.423095082 0.7276315641416946 0.8241074636438563 0.7541758079463945 0.6909912477818386 0.698394787653583 0.8814078732761054 0.7989543439076968 0.8754014764777611 0.8936878585787545 1.0 22.042661469816068 -7.5535485434968885 0.6463637568175818 0.9953494560509124 0.7453197279267526 0.7235865199098888 0.04963277286608462 0.397214627099525 0.3634733650974341 0.0512123329502769 0.024274710557646077 2.795448247401474e-08 7.5535485434968885 -0.2500297281241598 GPAGEAGAS(ph)PPVR ddPTM_KYSE-520_SHP099_60min_R1 5 GPAGEAGASPPVR 13 0 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 GPAGEAGAS(1)PPVR;GPAGEAGAS(1)PPVR;GPAGEAGAS(1)PPVR;GPAGEAGAS(1)PPVR;GPAGEAGAS(1)PPVR 128.35 5.0897e-05 3856500000.0 3430000.0 3513060.0 2798070.0 2368170.0 2824390.0 3494950.0 2833750.0 3225940.0 3772860.0 3505340.0 True False 3239731.062464522 3344287.3243894377 2978438.0692702914 2593240.1647837237 3046653.424419165 3473136.7206641217 3120213.104734861 3214749.967080053 3087803.730060842 3474285.414713251 0.9324884618703418 0.962582783275869 0.8572807681996719 0.74640965126285 0.8769151237595199 0.9996693725724822 0.8980877309391654 0.9252981788617333 0.8887593739375304 1.0 21.72828484653814 -6.041711578556608 24.227321699356764 0.9353008289629723 0.8712170776104127 0.2163888457724925 0.06312943524315993 635.854221984008 369321.22638061637 0.02257519028740853 0.022577991587420625 9.084236275741989e-07 6.041711578556608 -0.06408375135255961 GPAGEAGAS(ph)PPVRR ddPTM_KYSE-520_SHP099_60min_R1 6 GPAGEAGASPPVRR 14 1 Q13425;Q13425-2;A0A140TA73 Q13425 SNTB2 Beta-2-syntrophin 1 GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR;GPAGEAGAS(1)PPVRR 121.32 6.2599e-05 20759000000.0 6525270.0 6393350.0 6508380.0 4156810.0 5754090.0 5740100.0 5226480.0 5665830.0 7142410.0 5335530.0 True False 6163300.265296747 6086203.869386005 6927920.588576189 4551871.972609501 6206904.146706386 5704273.906718018 5754823.603929297 5646176.558144661 5845528.389503947 5288261.355179524 1.1654681664438118 1.1508893870052292 1.310056391556881 0.8607501912043786 1.173713576131616 1.0786671693393208 1.0882260193688809 1.0676810730268806 1.1053781189877492 1.0 22.33436204845871 -1.0000000000989384 0.21696122339111404 1.0341711204511266 1.8780239069504425 0.16218837946072395 0.10247533006596346 97.57925242605293 1.2369429389403654 0.16140089737937344 28.71562030693726 0.09999999997721859 1.0000000000989384 0.8438527864993159 GPALTPIRDEEWGGHS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 GPALTPIRDEEWGGHSPR 18 1 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 GPALTPIRDEEWGGHS(1)PR;GPALTPIRDEEWGGHS(1)PR;GPALTPIRDEEWGGHS(1)PR;GPALTPIRDEEWGGHS(1)PR;GPALTPIRDEEWGGHS(1)PR;GPALTPIRDEEWGGHS(1)PR 190.8 1.0656e-12 6233280000.0 1853340.0 2154020.0 1863000.0 2802380.0 2550470.0 2422460.0 2174380.0 2765310.0 3469390.0 1924560.0 True False 1750531.5356583074 2050537.6459500627 1983091.9609053938 3068717.352633728 2751177.4788107695 2407340.5285740886 2394187.5503037996 2755717.785038204 2839436.232204686 1907509.8956850222 0.917705087464125 1.0749813935899277 1.0396234197218823 1.608755665999675 1.4422873952235884 1.2620330484364632 1.25513768275577 1.4446676220510901 1.4885564885549345 1.0 20.863259110745016 -5.147146983650557 7.751545258840099 1.3708243095917132 1.0121594769100195 0.49474243822101793 0.16026496167809248 0.2245065973124082 13.784926345281946 0.042729871798751734 0.0744264048167746 7.126118112843956e-06 5.147146983650557 -0.3586648326816937 GPAPGPPPAGSALGGAPPVPS(ph)RPGASPDPFGPPPQVPSRPNR ddPTM_KYSE-520_SHP099_60min_R1 1 GPAPGPPPAGSALGGAPPVPSRPGASPDPFGPPPQVPSRPNR 42 2 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 GPAPGPPPAGSALGGAPPVPS(0.652)RPGAS(0.343)PDPFGPPPQVPS(0.005)RPNR 57.095 0.022324 184920000.0 94134.0 72337.0 69262.0 72389.0 90677.0 91845.0 70048.0 83494.0 84605.0 79247.0 True False 88912.19936852338 68861.82193994941 73726.73934311834 79268.82879545362 97812.7640184452 91271.76128682702 77129.13544259993 83204.37880164602 69242.8647184887 78544.93323323307 1.1319915328529915 0.8767188296598278 0.938656846574591 1.0092163241143894 1.2453096589693164 1.1620324511041678 0.9819746770115771 1.0593220386931528 0.8815701009367135 1.0 16.26123059287856 -3.8676475394536594 19.56881890321745 1.0255771721318703 42.53427037052153 0.0847099234939942 0.1101436141574272 1667.1358746564763 246385.11008149383 0.028785510235384257 1360.3873759795267 0.00013562896903804699 3.8676475394536594 41.508693198389665 GPAS(ph)DS(ph)ETEDASR ddPTM_KYSE-520_SHP099_60min_R1 2 GPASDSETEDASR 13 0 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 2 GPAS(1)DS(0.949)ET(0.051)EDASR;GPAS(1)DS(0.819)ET(0.181)EDASR 207.52 4.0026e-12 305320000.0 883140.0 777060.0 685460.0 783410.0 806480.0 786590.0 839360.0 862450.0 850150.0 799670.0 True False 834150.4637040563 739728.8712091604 729645.8483747776 857865.0508591953 869945.3877564941 781680.6000392552 924210.7001641828 859458.362247344 695784.1905374759 792585.5459338459 1.052442184926849 0.9333110791688634 0.9205893951990872 1.0823627244532137 1.097604406514253 0.9862413010803242 1.166070596297908 1.0843729950117962 0.877866362952259 1.0 19.596207132129155 -5.266849444169583 24.646731059797315 1.0507435194308772 0.9652339053792727 0.14179147606815168 0.08053970023082488 610.8245931962358 2782748.4632306243 0.022564860556479608 0.034595292617397064 5.409418174519952e-06 5.266849444169583 -0.08550961405160451 GPAS(ph)PTRPAAPR ddPTM_KYSE-520_SHP099_60min_R1 3 GPASPTRPAAPR 12 1 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 GPAS(0.946)PT(0.054)RPAAPR;GPAS(0.974)PT(0.026)RPAAPR;GPAS(0.959)PT(0.041)RPAAPR 113.82 0.00025557 1489510000.0 2126910.0 1806110.0 1628450.0 1640340.0 1687480.0 2020800.0 1839880.0 2186340.0 2048140.0 1955710.0 True False 2008926.0624100338 1719341.7645736202 1733422.4926121251 1796237.4204137956 1820275.0755521904 2008187.4376223024 2025873.0258983946 2178756.09683559 1676249.405407783 1938383.9309193566 1.036392239104675 0.886997532918132 0.8942616913822535 0.9266675150169336 0.9390683891445859 1.036011187252176 1.04513507029412 1.124006478841489 0.8647664575989104 1.0 20.886422919424664 -6.2257230248515985 6.370057033895548 1.023714159998213 0.9305646956282922 0.21898495461845424 0.07140288296638111 0.26969763397182206 34.10507712064907 0.023314009374468845 0.02295594490473908 5.946712945837396e-07 6.2257230248515985 -0.09314946436992066 GPAS(ph)PTRPAAPRPAEAPLLDL ddPTM_KYSE-520_SHP099_60min_R1 3 GPASPTRPAAPRPAEAPLLDL 21 2 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 GPAS(0.87)PT(0.13)RPAAPRPAEAPLLDL;GPAS(0.771)PT(0.229)RPAAPRPAEAPLLDL;GPAS(0.88)PT(0.12)RPAAPRPAEAPLLDL 179.76 6.4874e-10 1470370000.0 1530270.0 1660710.0 1311771.0 1019861.0 1075419.0 1664940.0 1057987.0 1408910.0 1784060.0 1540550.0 True False 1445382.8725823842 1580926.9988234707 1396329.8575678088 1116788.28280761 1160048.3570029028 1654548.4918818641 1164938.6509180844 1404022.8200520673 1460119.6764927227 1526901.9255297645 0.946611467583881 1.0353821502156806 0.9144856223056677 0.7314079995151856 0.7597399267149523 1.0835984055150183 0.7629426824606986 0.9195239043037661 0.9562629086253386 1.0 20.542175968658793 -9.431198412863601 17.255551548190425 0.9999999999579742 0.8981454693338583 0.0652743219446914 0.11176519922685368 0.0 0.0 0.11160160665713798 0.027067365425647947 3.705114103395539e-10 9.431198412863601 -0.10185453062411587 GPASPGKSPAR ddPTM_KYSE-520_SHP099_60min_R1 1 GPASPGKSPAR 11 1 A0A087WXK1 A0A087WXK1 FAM175A 0 56.403999999999996 0.059774 1706900000.0 477670.0 452660.0 457120.0 415350.0 548930.0 484070.0 411040.0 506220.0 605910.0 500580.0 False True 451172.69288846216 430913.53414348775 486586.6866178596 454824.73912046896 592127.66801554 481048.739573351 452591.93456381775 504464.04097263626 495892.0177481175 496145.25064534653 0.90935606518779 0.8685229448089838 0.9807343433902593 0.9167169060448909 1.193456285725495 0.9695723962844365 0.9122166018421459 1.0167668446215483 0.9994895992717866 1.0 18.920403017848624 -5.026775618341594 1.931268175279931 1.0062745006298626 0.8895300547579097 0.25700118049151643 0.074005122347257 0.4911687339232112 3.562277928415532 0.02245384491425661 0.05917270116935224 9.402089514452327e-06 5.026775618341594 -0.11674444587195287 GPASPT(ph)RPAAPRPAEAPLLDL ddPTM_KYSE-520_SHP099_60min_R1 1 GPASPTRPAAPRPAEAPLLDL 21 2 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 GPAS(0.434)PT(0.566)RPAAPRPAEAPLLDL 199.83 3.6438e-13 1122400000.0 452950.0 604880.0 364460.0 290950.0 312250.0 511530.0 286420.0 396210.0 532960.0 474090.0 True False 427823.96056656033 575820.6568566102 387953.6747566178 318601.8005226928 336822.2985405285 508337.35152758146 315374.1287898223 394835.6399861097 436187.89882826916 469889.93143643846 0.9104769690610655 1.2254373169826067 0.8256267027698505 0.6780349592695832 0.7168110572424345 1.0818221832794128 0.6711659639646538 0.8402726118840422 0.9282767508868657 1.0 18.841963329168085 -4.788280353865398 24.798703547738562 0.8290762450490472 1.0679570976318904 0.27214936279409896 0.14595412850056422 204.19611709953338 188658.979421925 0.03720358255309025 0.0774804064449425 1.6282445985161322e-05 4.788280353865398 0.2388808525828432 GPASQFYITPSTSLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 GPASQFYITPSTSLSPR 17 0 H0YIQ2;P49750-3;P49750-1;P49750 H0YIQ2 YLPM1 YLP motif-containing protein 1 1 GPASQFYITPS(0.004)T(0.004)S(0.006)LS(0.985)PR;GPASQFYITPSTSLS(1)PR;GPASQFYITPSTS(0.002)LS(0.998)PR;GPASQFYITPSTSLS(1)PR;GPASQFYITPST(0.001)S(0.001)LS(0.998)PR 237.84 3.2099e-23 1832540000.0 1554030.0 1607430.0 1359510.0 1056760.0 1117750.0 1468420.0 1106260.0 1369400.0 1674240.0 1361140.0 True False 1467824.8580179974 1530206.6499983792 1447146.1898929111 1157194.152673521 1205710.5658724613 1459255.0460972588 1218091.556857163 1364649.8710203613 1370240.2201558123 1349081.3585508964 1.0880180418434127 1.1342582419506833 1.0726900796015373 0.8577645412849754 0.8937270967612839 1.0816657104095668 0.9029044461525769 1.0115400841993605 1.0156839033248843 1.0 20.36354592431056 -5.039985112371685 11.644312149657793 0.9657465598544507 1.1092488647173375 0.4782161904863884 0.06408875262979265 0.9544111983586951 277.48386827347593 0.01770325634496937 0.030885830788372235 9.120421036516484e-06 5.039985112371685 0.14350230486288684 GPASTPTYS(ph)PAPTQPAPR ddPTM_KYSE-520_SHP099_60min_R1 1 GPASTPTYSPAPTQPAPR 18 0 Q6P1N0;Q6P1N0-2;K7EJY5 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 GPAS(0.001)T(0.047)PT(0.004)YS(0.948)PAPTQPAPR 156.67 2.4599e-06 0.0 87026.0 106740.0 82017.0 70650.0 58520.0 97968.0 81450.0 110730.0 93247.0 107120.0 True False 82198.49429797012 101612.05017999353 87303.94705183987 77364.55475830293 63125.19106674692 97356.54537261566 89683.76087539642 110345.90347457615 76315.69536558019 106171.00013809891 0.7742085333193881 0.9570603088209072 0.8222956074472478 0.7286787791173972 0.5945615185374408 0.9169786970639996 0.8447105213169586 1.039322445216178 0.7187998160167534 1.0 16.696030232383936 GPAVGIDLGTTYSCVGVFQHGK ddPTM_KYSE-520_SHP099_60min_R1 2 GPAVGIDLGTTYSCVGVFQHGK 22 0 E9PKE3;P11142;E9PNE6;P11142-2;E9PLF4;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PN25;E9PI65 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ; 238.45 2.273e-23 732880000.0 900440.0 909350.0 750870.0 1124190.0 960500.0 958280.0 811760.0 964400.0 808010.0 607290.0 False True 850490.7982173624 865663.4610378224 799272.2816344784 1231032.6795999524 1036085.8855025717 952299.0190640836 893820.62281414 961054.7214926529 661295.752274524 601909.8830644713 1.4129869306802283 1.4381944629825927 1.3278936002266428 2.0452109430941094 1.7213305756463135 1.5821288964648579 1.4849741596922772 1.5966754302150463 1.0986623926287846 1.0 19.19918797971409 -7.808998325527637 4.3929039286970974 1.0100908161822797 1.5824222519250832 0.5539728489781082 0.1896183968643835 0.16281119565640534 6.2567176192632035 0.18996921598265706 0.05176878175130945 1.5523929953764212e-08 7.808998325527637 0.5723314357428035 GPCAPAASS(ph)PTQK ddPTM_KYSE-520_SHP099_60min_R1 2 GPCAPAASSPTQK 13 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 GPCAPAAS(0.056)S(0.938)PT(0.006)QK;GPCAPAAS(0.381)S(0.618)PTQK 202.15 7.822e-09 1456370000.0 3318700.0 3643000.0 2402300.0 2184700.0 2549300.0 3503000.0 2611200.0 3473300.0 4130000.0 3804100.0 True False 3134605.095335568 3467984.8117455146 2557156.1018159036 2392333.231145995 2749915.4064671523 3481136.4776281263 2875165.5788561697 3461251.9329743115 3380096.1088275914 3770398.6335450206 0.8313723295587808 0.9197926131446825 0.6782190294323344 0.6345040574387927 0.7293434126570364 0.9232807498540485 0.7625627574962462 0.9180068924754405 0.896482424631462 1.0 21.84628563293357 -7.512305136286038 0.8358309201220637 0.990671430419371 0.7680539041096196 0.40461733414448287 0.08924118731657278 0.6485412627061354 0.8854669688952012 0.09110800011157252 0.03657792685659351 3.0739363012354506e-08 7.512305136286038 -0.2226175263097514 GPDEAMEDGEEGS(ph)DDEAEWVVTK ddPTM_KYSE-520_SHP099_60min_R1 5 GPDEAMEDGEEGSDDEAEWVVTK 23 0 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 GPDEAMEDGEEGS(1)DDEAEWVVTK;GPDEAMEDGEEGS(1)DDEAEWVVTK;GPDEAMEDGEEGS(1)DDEAEWVVTK;GPDEAMEDGEEGS(1)DDEAEWVVTK;GPDEAMEDGEEGS(1)DDEAEWVVTK 190.37 3.1523000000000004e-15 1054600000.0 718803.0 664587.0 633366.0 594473.0 641487.0 604936.0 609811.0 622707.0 806749.0 604064.0 True False 678929.5646917438 632659.2429545758 674193.7857814311 650971.5351851757 691968.3773382478 601160.3700343837 671456.6470618328 620546.9747579071 660263.7180872995 598712.4629146813 1.1339826824157722 1.0566996382113596 1.126072743666113 1.0872857598722503 1.1557607703196515 1.0040886189470408 1.1215010353935422 1.0364691119622431 1.102806036261499 1.0 19.19150377640972 -6.255692327611863 24.984290942679877 1.059535285112391 1.1083034928218 0.304820694517693 0.04381210974620594 675.5702280985452 2936922.2331603686 0.01367367371742856 0.013307180621073741 5.550187722399086e-07 6.255692327611863 0.04876820770940915 GPDNCIQCAHYIDGPHCVK ddPTM_KYSE-520_SHP099_60min_R1 1 GPDNCIQCAHYIDGPHCVK 19 0 P00533;E9PFD7;Q504U8;P00533-3;P00533-4;A0A1W2PRR9 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 0 105.67 0.00028406 1042600000.0 489010.0 660730.0 478260.0 409720.0 739080.0 627710.0 572600.0 615580.0 560400.0 589090.0 False True 461883.6404827328 628987.5390240505 509089.4048430557 448659.66561319 797241.391210036 623792.229052798 630483.9960374706 613444.6966574523 458645.48653437814 583871.1209050842 0.7910712209344192 1.0772711930828662 0.8719208513925024 0.7684224301378411 1.3654406985812164 1.068373150714888 1.0798341850854514 1.0506508623110606 0.7855252128644618 1.0 19.155290429586085 -4.250369281605087 23.531916850985272 1.012717433916301 0.7910709227593252 0.13483669234453577 0.16398287330273625 1524.535993448941 3240592.499444814 0.04183558235136612 0.5771608183712308 5.618633682902036e-05 4.250369281605087 -0.22164651115697576 GPDPSS(ph)PDKAK ddPTM_KYSE-520_SHP099_60min_R1 3 GPDPSSPDKAK 11 1 H9KVB4;O15417;O15417-2 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 GPDPS(0.191)S(0.809)PDKAK;GPDPS(0.031)S(0.969)PDKAK;GPDPS(0.225)S(0.775)PDKAK 161.25 3.2259000000000004e-05 895260000.0 2354800.0 2089370.0 1900660.0 1657580.0 1896400.0 2100920.0 1856860.0 1953060.0 2409500.0 2084320.0 True False 2224174.5498225815 1988993.5289916913 2023179.5847635246 1815115.9048304025 2045635.8909599928 2087807.3789832962 2044569.5300072238 1946285.2907076285 1971995.5385520796 2065854.5463764225 1.0766365684960044 0.962794564835386 0.9793427075068033 0.8786271560184021 0.9902129336976343 1.0106265141683763 0.9896967497510736 0.9421211643973084 0.9545664974385661 1.0 20.978307249176382 -4.260384766825637 24.463427373298245 0.966081000968928 1.0766366103512293 0.4547594139382448 0.03579994603911013 63.20204644428472 1465797.4511362573 0.009226010465242887 0.05524384327472999 5.490542191376629e-05 4.260384766825637 0.11055560938230125 GPDSKDS(ph)PKDR ddPTM_KYSE-520_SHP099_60min_R1 2 GPDSKDSPKDR 11 2 Q9BUA3;H0YGY5 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 GPDS(0.018)KDS(0.982)PKDR;GPDS(0.068)KDS(0.932)PKDR 98.531 0.0015085 0.0 748930.0 685840.0 483250.0 539750.0 748790.0 889380.0 647780.0 619200.0 831700.0 1330770.0 True False 707385.3599450587 652891.2169331718 514401.0682273387 591047.6777182448 807715.512967693 883829.0495212405 713263.9241235635 617052.1397223666 680684.2454508257 1318980.413123394 0.5363122552138164 0.4949969009676964 0.38999901978014834 0.44810951841098406 0.6123787017086881 0.6700850450298204 0.5407691554983204 0.46782509700895747 0.5160685016079507 1.0 20.330991710032237 -11.25928195663878 2.139650877528462 2.7247756487000587 0.5192292764729179 0.7840968420062453 0.07562284331146119 4333499.814355145 654718.3149318179 36151386.247923695 0.022735854936066138 5.504502120482104e-12 11.25928195663878 -2.2055463722271407 GPEEEEIGSPEPMAAPASASQKLS(ph)PLQK ddPTM_KYSE-520_SHP099_60min_R1 1 GPEEEEIGSPEPMAAPASASQKLSPLQK 28 1 H3BRB3;Q14807-2;Q14807 H3BRB3 KIF22 Kinesin-like protein;Kinesin-like protein KIF22 1 GPEEEEIGSPEPMAAPAS(0.027)AS(0.075)QKLS(0.898)PLQK 182.73 7.2183e-12 585680000.0 141260.0 223560.0 129230.0 113330.0 141180.0 167520.0 105090.0 166490.0 213560.0 193900.0 True False 133424.02620517134 212819.84202959872 137560.37257531084 124100.84912609319 152290.06279568217 166474.44554161135 115713.5227795629 165912.48504905807 174782.88740949662 192182.19685191737 0.6942579926275839 1.1073858323806305 0.7157810391839031 0.645745813914891 0.7924254446577412 0.8662323996113195 0.6021032367983801 0.8633082968496767 0.9094645095777134 1.0 17.55211517005378 -7.804692084857621 2.4548259205982363 0.9881413818759001 0.7831022108004322 0.22531014274302508 0.1341444292992814 0.4310062453655072 4.993429032717155 0.12743769203690952 0.03585594842738093 1.567862291778486e-08 7.804692084857621 -0.20503917107546787 GPEENYSRPEAPNEFYDGDHDNDKES(ph)DVEI ddPTM_KYSE-520_SHP099_60min_R1 6 GPEENYSRPEAPNEFYDGDHDNDKESDVEI 30 2 O15379;O15379-2 O15379 HDAC3 Histone deacetylase 3 1 GPEENYSRPEAPNEFY(0.01)DGDHDNDKES(0.99)DVEI;GPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI;GPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI;GPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI;GPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI;GPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI 113.47 0.00020766 5654560000.0 3150850.0 2601998.0 2400680.0 2820510.0 2624140.0 2852400.0 2833980.0 2964260.0 3101510.0 2827240.0 True False 2976066.069436245 2476994.1104013794 2555431.674023811 3088570.4223827436 2830644.8886858053 2834597.113555945 3120466.3553794413 2953977.673923484 2538353.9667045656 2802192.8531594356 1.0620489828459772 0.8839484789951559 0.9119399727048034 1.1021976659816333 1.0101534894339232 1.0115638937412799 1.1135801562912262 1.0541664434669131 0.9058455644273751 1.0 21.41812481799882 -5.246198456751504 24.97381399532397 1.0325827369697747 0.9457760776196954 0.19481747770502988 0.06959052617301431 1174.0714510347618 1923833.5018482395 0.01873143992695583 0.03229790462711853 5.672853174536385e-06 5.246198456751504 -0.08680665935007925 GPGAPAAS(ph)SPTQK ddPTM_KYSE-520_SHP099_60min_R1 1 GPGAPAASSPTQK 13 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 GPGAPAAS(0.492)S(0.479)PT(0.029)QK 169.58 6.813299999999999e-07 1045300000.0 2348400.0 2535800.0 1660900.0 1651600.0 1838100.0 2487700.0 2020200.0 2714000.0 2963600.0 2557000.0 True False 2218129.570580661 2413976.361686602 1767964.2715339616 1808567.5674283535 1982748.0126416206 2472173.341534537 2224421.531252004 2704585.767452359 2425484.946276379 2534346.969315898 0.8752272666040694 0.9525042904201123 0.6976015095562041 0.7136227159600582 0.7823506554735196 0.9754675944004052 0.877709941923401 1.0671726484958821 0.957045335797527 1.0 21.273182622076 -6.265074893193187 24.08221444909271 0.9735668355370675 0.8015359860988936 0.5257987554183752 0.08126924975175413 171.93602597378683 1138925.8674151404 0.030513454226725384 0.027990390853266846 5.431566571635272e-07 6.265074893193187 -0.17203084943817382 GPGAPAASS(ph)PTQK ddPTM_KYSE-520_SHP099_60min_R1 6 GPGAPAASSPTQK 13 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 GPGAPAAS(0.198)S(0.603)PT(0.198)QK;GPGAPAAS(0.042)S(0.954)PT(0.003)QK;GPGAPAAS(0.077)S(0.923)PTQK;GPGAPAAS(0.078)S(0.922)PTQK;GPGAPAAS(0.267)S(0.733)PTQK;GPGAPAAS(0.161)S(0.834)PT(0.005)QK 290.85 3.2909e-30 7066640000.0 12468900.0 13637200.0 9076500.0 8313300.0 9185660.0 13464800.0 9994380.0 14026100.0 15873700.0 14116500.0 True False 11777225.26086408 12982048.442145485 9661585.712913465 9103393.532515218 9908519.182743937 13380761.188686047 11004709.466149086 13977446.732816339 12991436.223413203 13991438.792470802 0.8417451153916884 0.9278565724871342 0.6905355379257095 0.6506402713503645 0.7081844354760711 0.9563534806646634 0.7865316519178169 0.9989999556255792 0.9285275385976938 1.0 23.738040992120265 -6.972058000046354 1.1800313855103515 0.9805182680049734 0.7724620473690256 0.4272036596858405 0.09501503027672799 0.5252758760609311 1.3863415411736404 0.07764204158930821 0.03682998913721535 1.0664536867846099e-07 6.972058000046354 -0.20805622063594786 GPGAPAASS(ph)PTRK ddPTM_KYSE-520_SHP099_60min_R1 8 GPGAPAASSPTRK 13 1 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 GPGAPAAS(0.168)S(0.416)PT(0.416)RK;GPGAPAAS(0.244)S(0.754)PT(0.002)RK;GPGAPAAS(0.017)S(0.942)PT(0.04)RK;GPGAPAAS(0.012)S(0.972)PT(0.016)RK;GPGAPAAS(0.039)S(0.93)PT(0.032)RK;GPGAPAAS(0.398)S(0.535)PT(0.067)RK;GPGAPAAS(0.306)S(0.586)PT(0.107)RK;GPGAPAAS(0.413)S(0.538)PT(0.05)RK 204.49 4.8042e-09 9534040000.0 8386520.0 7400720.0 5918480.0 5312600.0 6034270.0 8054900.0 7028730.0 8760710.0 10039570.0 8366330.0 True False 7921303.017486866 7045178.302492811 6299994.69070282 5817507.906708565 6509132.718700251 8004626.381286547 7739262.62219429 8730321.141775094 8216637.164964225 8292210.825106236 0.9552703355664358 0.8496139872809555 0.7597484945303603 0.7015629521978577 0.7849695160900421 0.9653187250197531 0.9333171557532292 1.0528339577838997 0.9908861868401612 1.0 22.98332536600169 -6.334899020220718 4.167363748874184 0.992419349325558 0.8034114751080492 0.6370466809060675 0.0673200406559217 0.16288809142755378 5.44592046911521 0.02696135638897068 0.02384816994844449 4.6248854420702186e-07 6.334899020220718 -0.18900787421750875 GPGAPGLAHLQESQAGS(ph)DT(ph)DVEEGKAPQAVPLEK ddPTM_KYSE-520_SHP099_60min_R1 1 GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK 34 1 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 2 GPGAPGLAHLQESQAGS(1)DT(1)DVEEGKAPQAVPLEK 252.15 1.7623e-30 1267700000.0 974580.0 825900.0 854570.0 900010.0 758480.0 696100.0 744030.0 942400.0 964040.0 865930.0 True False 920518.1046229361 786222.524298826 909656.9495603441 985546.6798021258 818168.0608391349 691755.381694816 819243.8134330409 939131.0343578135 788994.6374707386 858258.5338833451 1.072541743870447 0.9160672376206046 1.0598868681729707 1.1483097934871007 0.953288582097968 0.8059988387937658 0.9545419953195512 1.0942286004527637 0.9192971655065176 1.0 19.71105277177515 -5.930734405222408 24.9999649248503 0.951677810973593 1.0417486133921936 0.22441650414568381 0.08565228636417269 86.88128589435878 31356.432492155458 0.028324039658750043 0.03211643894781141 1.1729124462321377e-06 5.930734405222408 0.09007080241860055 GPGAPGLAHLQESQAGS(ph)DTDVEEGKAPQAVPLEK ddPTM_KYSE-520_SHP099_60min_R1 3 GPGAPGLAHLQESQAGSDTDVEEGKAPQAVPLEK 34 1 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 GPGAPGLAHLQES(0.001)QAGS(0.85)DT(0.149)DVEEGKAPQAVPLEK;GPGAPGLAHLQESQAGS(0.985)DT(0.015)DVEEGKAPQAVPLEK;GPGAPGLAHLQESQAGS(1)DTDVEEGKAPQAVPLEK 195.91 9.5646e-16 35555000000.0 6158780.0 5927500.0 6600050.0 5650120.0 6016630.0 6007820.0 5739970.0 5610100.0 7063780.0 5393820.0 True False 5817140.1961764535 5642734.002641116 7025499.783453371 6187105.7060294775 6490104.551058123 5970322.9668923225 6320222.184308764 5590639.872507183 5781175.61540295 5346034.951128457 1.088122365333312 1.0554988985715537 1.314151487537583 1.1573260860787087 1.214003389500507 1.1167758949335131 1.1822261249853356 1.045754456080968 1.0813950279510691 1.0 22.35003783893937 -7.511485365234298 1.2595302848190375 1.0142324933199858 1.1659936696180533 0.360653884254202 0.07065472428688649 0.5084723801325449 1.4448910974966922 0.06576868566350268 0.022483937473806857 3.079744120334744e-08 7.511485365234298 0.1517611762980675 GPGDLMGPQGLS(ph)PEEMAR ddPTM_KYSE-520_SHP099_60min_R1 6 GPGDLMGPQGLSPEEMAR 18 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 GPGDLMGPQGLS(1)PEEMAR;GPGDLMGPQGLS(1)PEEMAR;GPGDLMGPQGLS(1)PEEMAR;GPGDLMGPQGLS(1)PEEMAR;GPGDLMGPQGLS(1)PEEMAR;GPGDLMGPQGLS(1)PEEMAR 238.68 1.4718e-23 1833810000.0 1076130.0 1084570.0 823882.0 648650.0 772636.0 995955.0 756000.0 893760.0 1034670.0 1016710.0 True False 1016434.9236880293 1032465.629227241 876990.751977808 710297.5009762663 833438.0575025139 989738.87541425 832423.8578489835 890659.7551651521 846800.0099081452 1007702.7403884117 1.0086654356980829 1.0245736047411012 0.8702871559521395 0.7048680851085979 0.8270673722503437 0.9821734483254082 0.8260609249987072 0.8838516751694591 0.8403271877396625 1.0 19.942638694060136 -4.779182180824201 6.996941097893676 0.8577746251034953 1.017222840792755 0.36178769845494485 0.07890070855955848 0.14055744874581905 30.00903737966313 0.020886887085526194 0.04681467834901422 1.662715016971405e-05 4.779182180824201 0.1594482156892597 GPGEPDS(ph)PTPLHPPT(ph)PPILSTDR ddPTM_KYSE-520_SHP099_60min_R1 1 GPGEPDSPTPLHPPTPPILSTDR 23 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 2 GPGEPDS(0.954)PT(0.047)PLHPPT(0.792)PPILS(0.11)T(0.097)DR 87.439 0.004775 203450000.0 210720.0 196930.0 202680.0 151090.0 170670.0 170320.0 170130.0 209410.0 212120.0 198430.0 True False 199030.94154009438 187469.18720204363 215745.0770994661 165449.548173135 184100.7580205349 169256.96970300368 187328.40070879273 208683.60558666152 173604.35511005038 196672.0645762041 1.0119939604486954 0.9532069925945448 1.0969787578340686 0.8412457993444646 0.9360798566753327 0.8606050384823313 0.9524911487173054 1.0610739559598374 0.8827097813008632 1.0 17.58543252529412 -5.257246943440338 24.999861744955016 0.9338694484680721 1.0139746044750828 0.24808096308182015 0.06932267975889912 582.6250545561185 3474232.462004511 0.01915419665608492 0.031716216035023066 5.5303555919573725e-06 5.257246943440338 0.08010515600701074 GPGEPDS(ph)PTPLHPPTPPILSTDR ddPTM_KYSE-520_SHP099_60min_R1 6 GPGEPDSPTPLHPPTPPILSTDR 23 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 GPGEPDS(0.872)PT(0.128)PLHPPTPPILSTDR;GPGEPDS(0.866)PT(0.134)PLHPPTPPILSTDR;GPGEPDS(0.979)PT(0.021)PLHPPTPPILSTDR;GPGEPDS(0.955)PT(0.045)PLHPPTPPILSTDR;GPGEPDS(0.971)PT(0.029)PLHPPTPPILSTDR;GPGEPDS(0.961)PT(0.039)PLHPPTPPILSTDR 162.15 1.702e-10 3368320000.0 1310810.0 1296070.0 1093313.0 855889.0 909001.0 1204480.0 986773.0 1295650.0 1347360.0 1187170.0 True False 1238096.756265048 1233804.8517592696 1163789.705342651 937232.4332275883 980534.2071917993 1196962.3935408287 1086525.64481642 1291155.692556982 1102713.3881815844 1176652.5974042844 1.0522194562747835 1.0485719017499846 0.9890682329771684 0.79652433972027 0.8333251542170343 1.0172606563580007 0.9234039403077119 1.097312575865887 0.9371613937828284 1.0 20.166257001864558 -9.224077528723214 13.791627087729365 0.9999999754957574 0.9644120516163844 0.011920365897324259 0.09146080819484652 0.0 0.0 0.0955982543131542 0.023185982362223176 5.969287154572706e-10 9.224077528723214 -0.03558792387937293 GPGGSQGSQGPS(ph)PQGAR ddPTM_KYSE-520_SHP099_60min_R1 6 GPGGSQGSQGPSPQGAR 17 0 Q96MG7 Q96MG7 NDNL2 Melanoma-associated antigen G1 1 GPGGSQGSQGPS(1)PQGAR;GPGGSQGSQGPS(1)PQGAR;GPGGSQGS(0.001)QGPS(0.999)PQGAR;GPGGSQGSQGPS(1)PQGAR;GPGGSQGS(0.015)QGPS(0.985)PQGAR;GPGGSQGSQGPS(1)PQGAR 334.82 1.0570999999999998e-58 3090350000.0 1413220.0 1671860.0 1220660.0 942840.0 999070.0 1531830.0 1063220.0 1373610.0 1535750.0 1469930.0 True False 1334825.8694157756 1591541.3360869791 1299345.696725055 1032447.2301248175 1077691.1250692897 1522269.2807665134 1170700.6536272443 1368845.2675129848 1256896.5131070141 1456907.5637882368 0.9162049141573364 1.0924106481736349 0.891851843603934 0.7086566476738293 0.7397113940894697 1.0448633246218613 0.8035517713856876 0.9395553304382103 0.8627153460847194 1.0 20.474477915158467 -4.92671005526013 8.326691301313385 0.8625926577485172 1.002789145604579 0.189271280768887 0.10763432359625576 0.39384638149906065 39.73171875575023 0.02828556767306549 0.059207986783732326 1.183831644521428e-05 4.92671005526013 0.14019648785606176 GPGMGVHVPATPQGS(ph)PMKDR ddPTM_KYSE-520_SHP099_60min_R1 2 GPGMGVHVPATPQGSPMKDR 20 1 E9PJJ0;B3KNB6;G3V147;E9PNS0;A0A2R8YFB7;Q5QJ74 E9PJJ0 TBCEL Tubulin-specific chaperone cofactor E-like protein 1 GPGMGVHVPAT(0.104)PQGS(0.896)PMKDR;GPGMGVHVPAT(0.186)PQGS(0.814)PMKDR 131.26 9.7665e-06 2381100000.0 1516130.0 1465340.0 1219550.0 1279410.0 1359100.0 1297840.0 1253250.0 1284490.0 1500270.0 1266910.0 True False 1432027.2465697762 1394942.866879818 1298164.1443489909 1401004.741731358 1466053.4377788047 1289739.6991506955 1379940.7405413194 1280034.4039922196 1227858.7867290007 1255686.1630410636 1.1404340421348944 1.1109008826707925 1.0338285015461608 1.1157284224095907 1.1675317296069159 1.0271194643310873 1.0989535292794275 1.0193903872383117 0.9778389082151948 1.0 20.260044502024478 -7.276988152241927 1.353008147735153 0.9842691340008535 1.1035238705655612 0.5629315327762907 0.040845213721336183 0.3496801665503054 1.1334185562445043 0.03481871092069276 0.01322406885223969 5.2845966820725505e-08 7.276988152241927 0.11925473656470775 GPGQPSS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 1 GPGQPSSPQR 10 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GPGQPS(0.008)S(0.992)PQR 72.531 0.020613999999999997 646200000.0 600840.0 594320.0 534040.0 427730.0 496130.0 632220.0 498630.0 582610.0 565980.0 636620.0 True False 567510.2074551552 565767.9751074936 568465.0728942121 468381.33059828624 535172.6084064449 628274.0804698985 549036.3865598389 580589.0618921967 463212.2991947307 630980.0420828646 0.8994107096982094 0.8966495568384286 0.900924014993738 0.7423076791021153 0.8481609127284606 0.9957114941321541 0.8701327299473217 0.9201385514122962 0.7341156111145248 1.0 19.267234847880076 GPGQPSS(ph)PQRLDR ddPTM_KYSE-520_SHP099_60min_R1 2 GPGQPSSPQRLDR 13 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 GPGQPS(0.049)S(0.951)PQRLDR;GPGQPS(0.254)S(0.746)PQRLDR 109.64 0.00090554 344840000.0 2772300.0 2679210.0 2752700.0 2071590.0 2445320.0 2639030.0 2168050.0 2400020.0 3057140.0 2592260.0 True False 2618514.9925569617 2550496.7300238027 2930143.4464757233 2268473.2907537553 2637752.7720324234 2622558.8348715263 2387217.652128949 2391694.890788881 2502040.440227887 2569294.5931477654 1.0191571645931399 0.9926836481989664 1.1404466635668526 0.8829167728775471 1.0266447370680007 1.0207310760960675 0.9291334899842119 0.9308760844970687 0.9738238841512207 1.0 21.292940887241727 -5.266695228151549 24.99321371372364 0.9666568172756999 1.0449546060071453 0.33223741702187914 0.05468351590892488 536.8942522284462 2553099.1618066817 0.01533806979539902 0.023581556579696426 5.411339375678962e-06 5.266695228151549 0.07829778873144544 GPGQVPTATSALS(ph)LELQEVEPLGLPQAS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 GPGQVPTATSALSLELQEVEPLGLPQASPSR 31 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 2 GPGQVPT(0.035)AT(0.15)S(0.139)ALS(0.676)LELQEVEPLGLPQAS(0.54)PS(0.46)R 83.88799999999999 0.0033902 18571000.0 13178.0 11340.0 12067.0 13653.0 10377.0 12395.0 9860.4 12189.0 17719.0 15556.0 True False 12446.990070308279 10795.20937831298 12844.858127882648 14950.577015075864 11193.610862946558 12317.638207308204 10857.185460230306 12146.719203933992 14501.676259640693 15418.185942384864 0.8072927721082468 0.7001607983359937 0.8330978868643624 0.9696715989120656 0.7260005103567421 0.7989032077662782 0.7041804723851276 0.7878176621636432 0.9405565812885504 1.0 13.912345411606472 -7.8589083683014955 3.7082338696135277 0.9962171548930516 0.7900989780477167 0.49368069844013507 0.07370850076104435 0.18953843002267265 4.618918152709004 0.07339315970446884 0.0196406946188624 1.3838583281399397e-08 7.8589083683014955 -0.20611817684533495 GPGQVPTATSALSLELQEVEPLGLPQAS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 6 GPGQVPTATSALSLELQEVEPLGLPQASPSR 31 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 GPGQVPTATSALSLELQEVEPLGLPQAS(0.733)PS(0.267)R;GPGQVPTATSALSLELQEVEPLGLPQAS(0.71)PS(0.29)R;GPGQVPTATSALSLELQEVEPLGLPQAS(0.99)PS(0.01)R;GPGQVPTATSALSLELQEVEPLGLPQAS(0.832)PS(0.168)R;GPGQVPTATSALSLELQEVEPLGLPQAS(0.969)PS(0.031)R;GPGQVPTATSALSLELQEVEPLGLPQAS(0.947)PS(0.053)R 247.42 1.8527e-31 2037100000.0 1046942.0 1725671.0 1224345.0 1018684.0 1090095.0 1638644.0 1065315.0 1481230.0 1701659.0 1603164.0 True False 988866.0402328644 1642767.174875022 1303268.2377212618 1115499.4210814885 1175879.274707885 1628416.6149718699 1173007.436672473 1476091.958851682 1392680.6209325534 1588961.2142027172 0.6223349137751241 1.0338623499374102 0.8202014159138518 0.7020306166763205 0.7400301934354631 1.024830940123954 0.7382228251940344 0.928966639121101 0.8764723823868475 1.0 20.599652478931738 -6.231794065234926 24.99211703960609 0.8982917949561898 0.7950818281582439 0.20943205520799346 0.12352071889982189 1431.7591518521049 1207027.6962904425 0.04033670596807877 0.04033054784021495 5.864161667754991e-07 6.231794065234926 -0.10320996679794592 GPGS(ph)DSSLFETYNVELVR ddPTM_KYSE-520_SHP099_60min_R1 1 GPGSDSSLFETYNVELVR 18 0 A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35;A0A0U1RR46 A0A0X1KG69 INADL InaD-like protein 1 GPGS(0.978)DS(0.01)S(0.011)LFETYNVELVR 61.692 0.024021999999999998 50149000.0 57859.0 61289.0 57352.0 51969.0 49937.0 46619.0 62264.0 81435.0 71898.0 55173.0 True False 54649.445930943024 58344.584443335465 61049.00168644447 56908.1181349504 53866.75779733664 46328.03352855998 68558.2527580808 81152.5209920718 58843.135601086244 54684.21014394444 0.9993642732900428 1.0669365853462247 1.1163917614562977 1.0406681926126755 0.9850514006793547 0.8471921493720286 1.253712041878559 1.4840210872289317 1.0760534978231253 1.0 15.738836700034879 -6.792051010063385 24.924202791749227 1.2437819721587364 1.0170845771608987 0.30730760050095596 0.1372890641767637 208.65557890553995 169886.862971905 0.05672165003000159 0.03824668013779988 1.614168953458712e-07 6.792051010063385 -0.2266973949978377 GPGS(ph)PPRT(ph)PPAPGPPSFEEQLR ddPTM_KYSE-520_SHP099_60min_R1 1 GPGSPPRTPPAPGPPSFEEQLR 22 1 A0A6E1YH78;Q6ZTN6-2;Q6ZTN6;Q6ZTN6-3 A0A6E1YH78 ANKRD13D Ankyrin repeat domain-containing protein 13D 2 GPGS(1)PPRT(0.995)PPAPGPPS(0.005)FEEQLR 52.824 0.055140999999999996 943870000.0 450810.0 450410.0 478840.0 403880.0 476040.0 449000.0 429850.0 430620.0 614490.0 469630.0 True False 425802.6706325451 428771.62752080656 509706.7925710891 442264.6337690498 513501.63970290846 446197.6244519064 473303.4329317266 429126.27972746355 502914.1060323165 465469.4435666111 0.9147811451808232 0.9211595593373191 1.0950381375531635 0.950147512112166 1.1031908684880702 0.9585970263331651 1.0168302978281203 0.9219214830501615 1.080444942161594 1.0 18.828326937469317 -4.635586084331283 11.473051149873148 1.011735061366507 0.9164255043098096 0.303408271481472 0.05905523517030794 0.41872534989753823 39.96868693131028 0.013940291271479114 0.03691320036680964 2.3142694141700736e-05 4.635586084331283 -0.09530955705669741 GPGSWWTS(ph)TESLCSNASGDSR ddPTM_KYSE-520_SHP099_60min_R1 5 GPGSWWTSTESLCSNASGDSR 21 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ES05 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 GPGSWWT(0.207)S(0.737)T(0.051)ES(0.004)LCSNASGDSR;GPGSWWT(0.027)S(0.968)T(0.005)ESLCSNASGDSR;GPGSWWT(0.003)S(0.994)T(0.004)ESLCSNASGDSR;GPGSWWT(0.002)S(0.96)T(0.037)ES(0.001)LCSNASGDSR;GPGSWWT(0.001)S(0.984)T(0.015)ESLCSNASGDSR 327.42 1.1777e-52 992160000.0 1206090.0 1155960.0 1202740.0 976520.0 1080010.0 1046780.0 1105620.0 1189690.0 1390590.0 1243430.0 True False 1139185.783419192 1100425.9464686657 1280270.5448520395 1069328.167198556 1165000.6425836866 1040246.6577366736 1217386.8594113667 1185563.2430657337 1138093.909921201 1232414.177573902 0.9243530333785701 0.8929026998333751 1.0388313994994332 0.8676694788627044 0.9452996109449796 0.8440722905220676 0.9878066007061703 0.9619844242619816 0.9234670702682295 1.0 20.233055753534224 -8.634027829214089 0.5938323581934389 1.0018892637656953 0.9271105046316795 0.1284958517383702 0.05388427455477589 4.755998703329434 2.6565751069786327 0.08174902833965085 0.022757996346830248 2.3225879621644557e-09 8.634027829214089 -0.07477875913401577 GPHHLDNSS(ph)PGPGSEAR ddPTM_KYSE-520_SHP099_60min_R1 3 GPHHLDNSSPGPGSEAR 17 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GPHHLDNS(0.137)S(0.863)PGPGSEAR;GPHHLDNS(0.052)S(0.948)PGPGSEAR;GPHHLDNS(0.162)S(0.838)PGPGSEAR 165.03 2.5263e-08 974390000.0 293169.0 336936.0 327858.0 325228.0 252073.0 305721.0 265776.0 237382.0 348211.0 271408.0 True False 276906.33115208754 320749.08880875324 348992.25127134717 356137.57133663615 271909.71100082167 303812.88183755317 292643.2318037982 236558.57724737542 284984.6600849791 269003.5362722285 1.0293780334242948 1.1923601200697926 1.2973519088543541 1.3239140877918756 1.0108034815038718 1.1294010705126865 1.087878753785774 0.879388354984229 1.0594086012184534 1.0 18.037265612753558 -6.497162457763195 1.1618110743617407 0.9840941459123409 1.2010258629488322 0.3960621665430375 0.10188403663021593 0.4841686191176263 1.3388844040106804 0.06186576117698332 0.04495007749260004 3.1830066227230834e-07 6.497162457763195 0.21693171703649128 GPHPDFPDDFSRPDDFHPDKR ddPTM_KYSE-520_SHP099_60min_R1 1 GPHPDFPDDFSRPDDFHPDKR 21 2 Q9C0J8 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 0 142.23 7.5065e-07 708970000.0 301910.0 371350.0 247470.0 269540.0 327600.0 292420.0 259730.0 311960.0 286400.0 209460.0 False True 285162.450457336 353509.78859228635 263422.3121659998 295157.0005598443 353380.2562109753 290594.8983123088 285986.04312052426 310877.8835720111 234396.97955647032 207604.3473574142 1.373586122290574 1.7028053270179335 1.2688670325024007 1.4217284190667665 1.7021813883434314 1.399753434893235 1.3775532485751234 1.4974536300860786 1.1290562193908666 1.0 17.663477129333536 -7.865704960420173 3.645579472746149 1.0043634528463043 1.4710730872283704 0.601816384237684 0.1328391948525456 0.1430871124533381 3.385059885340427 0.12464524902490924 0.03333766760976318 1.3623698992396978e-08 7.865704960420173 0.46670963438206603 GPIAQWADGAIS(ph)PNGHRPQLR ddPTM_KYSE-520_SHP099_60min_R1 6 GPIAQWADGAISPNGHRPQLR 21 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 GPIAQWADGAIS(1)PNGHRPQLR;GPIAQWADGAIS(1)PNGHRPQLR;GPIAQWADGAIS(1)PNGHRPQLR;GPIAQWADGAIS(1)PNGHRPQLR;GPIAQWADGAIS(1)PNGHRPQLR;GPIAQWADGAIS(1)PNGHRPQLR 175.48 1.2670999999999999e-09 5521110000.0 2590660.0 2508170.0 2694460.0 2269900.0 2389270.0 2548790.0 2286540.0 2292220.0 2911520.0 2613130.0 True False 2446950.925447324 2387673.7483600765 2868149.202888427 2485630.6135296817 2577291.955913302 2532882.0561843575 2517685.7776799113 2284268.8238281687 2382861.3614464165 2589979.7011843766 0.9447761016537516 0.9218889813183527 1.1074021937611502 0.9597104612028515 0.995101218258478 0.977954404440348 0.9720870694579553 0.8819639871245288 0.9200309023104518 1.0 21.304509360241642 -7.0672995787104975 7.681494272861836 0.9256407467038749 0.9856612283289127 0.14500560832434362 0.05371360359744756 0.4989638012275131 51.127050022495325 0.025266095342535624 0.014597000726512736 8.564468596901515e-08 7.0672995787104975 0.060020481625037814 GPIHS(ph)PVELK ddPTM_KYSE-520_SHP099_60min_R1 4 GPIHSPVELK 10 0 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 GPIHS(1)PVELK;GPIHS(1)PVELK;GPIHS(1)PVELK;GPIHS(1)PVELK 129.37 0.00024711 2648910000.0 2648030.0 2290830.0 2415660.0 2107090.0 2405030.0 2472160.0 2370730.0 2526610.0 2956830.0 2746030.0 True False 2501138.4971830696 2180775.0881940657 2571377.3087926595 2307347.2000802923 2594292.1782511678 2456730.3324388103 2610386.524495133 2517845.7796252053 2419944.2076185704 2721702.3105790145 0.9189610808872694 0.8012540826811173 0.9447680221301004 0.8477588423656177 0.9531873372658667 0.9026447612913867 0.9591006754665244 0.9250996223350963 0.8891289095844401 1.0 21.37607784831241 -5.767818945124308 24.99702777707642 0.9337164509518984 0.8774462979030505 0.2848794885750048 0.0462461112072492 202.50731212897392 793482.7232031426 0.013355248117584208 0.015505154001733624 1.7067937932342691e-06 5.767818945124308 -0.05627015304884786 GPILGS(ph)PHT(ph)PLFLPHGLEPEAGGTLPSR ddPTM_KYSE-520_SHP099_60min_R1 1 GPILGSPHTPLFLPHGLEPEAGGTLPSR 28 0 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 2 GPILGS(1)PHT(1)PLFLPHGLEPEAGGTLPSR 63.433 0.021575 45133000.0 43132.0 40540.0 58665.0 50917.0 35640.0 43418.0 37931.0 38748.0 55772.0 45595.0 True False 40739.38197848967 38592.39754821942 62446.639767318775 55756.13637124573 38444.66523613911 43147.012156910634 41765.43565088592 38613.592231851166 45645.21069770759 45191.063772373236 0.9014919892944626 0.8539829410214549 1.3818360214280778 1.233786764836708 0.8507138807305877 0.9547686767065617 0.9241967806125972 0.8544519426749345 1.0100494851730397 1.0 15.463749897192674 -5.774758664458692 24.98824822620115 0.9257979855693367 1.0963651762391382 0.21733561157691583 0.14875385274412606 374.97519134413756 703486.550668774 0.050000275710237733 0.057014764123996094 1.6797371814153408e-06 5.774758664458692 0.17056719066980153 GPILGS(ph)PHTPLFLPHGLEPEAGGTLPSR ddPTM_KYSE-520_SHP099_60min_R1 1 GPILGSPHTPLFLPHGLEPEAGGTLPSR 28 0 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 GPILGS(0.994)PHT(0.006)PLFLPHGLEPEAGGTLPSR 72.292 0.014719 65464000.0 35377.0 37322.0 31702.0 27465.0 35858.0 29252.0 27564.0 38721.0 39421.0 29049.0 True False 33414.567287698905 35528.99509853589 33745.56164499344 30075.265342346665 38679.82059588876 29069.427417521532 30350.438118716105 38586.68588854934 32263.140122540564 28791.64845978002 1.1605645760219943 1.2340035044595479 1.1720607693628138 1.0445829589910343 1.3434389020802977 1.00964790043646 1.054140340769776 1.340204120040307 1.1205728691641252 1.0 14.813362772016829 -5.001921648936069 24.2438010250706 1.1423783214321552 1.198721083012405 0.045643732151984584 0.11746296222349302 201.90155447318855 2547447.5796976825 0.030373001403723936 0.06173695649329384 9.955850146348224e-06 5.001921648936069 0.05634276158024987 GPKPEPPGS(ph)GS(ph)PAPPR ddPTM_KYSE-520_SHP099_60min_R1 2 GPKPEPPGSGSPAPPR 16 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 2 GPKPEPPGS(1)GS(1)PAPPR;GPKPEPPGS(1)GS(1)PAPPR 98.507 0.0021896999999999997 310220000.0 893260.0 791870.0 791800.0 738790.0 768590.0 784200.0 702520.0 723870.0 915360.0 706800.0 True False 843709.0871303367 753827.3765788979 842840.6949247943 809004.3794746876 829073.6603211048 779305.5169157799 773537.5775344801 721359.0639225274 749153.6983478016 700538.3018820799 1.2043725301865884 1.0760687524916919 1.2031329231540973 1.1548324728301087 1.1834808433653081 1.1124381276827868 1.1042045459274374 1.0297210901738134 1.0693971997464102 1.0 19.418104406498607 -6.992482704277994 1.1803621906037625 1.0252496773805575 1.1614645822336482 0.681024181628142 0.03840155999988917 0.28823386462665324 0.7565767272264002 0.02806743598205469 0.013095580785011421 1.0174598855831257e-07 6.992482704277994 0.13621490485309073 GPKPEPPGS(ph)GSPAPPR ddPTM_KYSE-520_SHP099_60min_R1 2 GPKPEPPGSGSPAPPR 16 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GPKPEPPGS(0.5)GS(0.5)PAPPR;GPKPEPPGS(0.5)GS(0.5)PAPPR 83.85600000000001 0.0054959 4147400000.0 4008000.0 3559100.0 3268900.0 2966060.0 3239700.0 3505100.0 2961870.0 3244210.0 3869600.0 3468500.0 True False 3785668.2502500876 3388115.4936819877 3479618.5244249273 3247953.4506215476 3494645.958628508 3483223.370749168 3261284.724665564 3232956.5927143083 3166978.1846777843 3437771.7884521647 1.1011982421190794 0.9855556744816577 1.0121726334811783 0.9447844855588621 1.0165439050862508 1.0132212331399308 0.9486623677640734 0.9404221081731335 0.9212299069170314 1.0 21.713042346078442 -1.000000004779117 0.8709298652447464 0.9689076616788883 52.98016598910054 0.5691531698588489 0.03290762267961525 608.2891111749224 1.5275236647722115 0.011783828099109312 62774.40803008676 0.09999999889956762 1.000000004779117 52.01125832742165 GPKPEPPGSGS(ph)PAPPR ddPTM_KYSE-520_SHP099_60min_R1 5 GPKPEPPGSGSPAPPR 16 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GPKPEPPGS(0.114)GS(0.886)PAPPR;GPKPEPPGSGS(1)PAPPR;GPKPEPPGS(0.022)GS(0.978)PAPPR;GPKPEPPGS(0.286)GS(0.714)PAPPR;GPKPEPPGS(0.216)GS(0.784)PAPPR 233.2 9.681700000000001e-23 10502200000.0 7151410.0 6521820.0 5790410.0 4952050.0 5451250.0 6166310.0 5620790.0 5681180.0 7137550.0 5801210.0 True False 6754707.031317596 6208501.977748603 6163669.093583567 5422691.343111878 5880232.361630281 6127823.772013438 6188994.306824061 5661473.312577379 5841550.842993311 5749815.792673086 1.1747692925963003 1.0797740660944328 1.071976792967498 0.9431069687522758 1.0226818690649853 1.0657426242805974 1.0763813189825342 0.9846355982032884 1.0159544329119417 1.0 22.455084306380492 -4.380796385265904 1.5663894713686095 1.020756526605368 1.2077181222138806 0.6109333645994498 0.03822865378449817 0.6055574742580225 1.6962947671637514 0.011520553327829888 0.16219221281223456 4.161056518472702e-05 4.380796385265904 0.18696159560851267 GPKS(ph)DDDGFEIVPIEDPAK ddPTM_KYSE-520_SHP099_60min_R1 1 GPKSDDDGFEIVPIEDPAK 19 1 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 GPKS(1)DDDGFEIVPIEDPAK 157.24 1.5684000000000002e-07 632100000.0 1247400.0 1039500.0 1077900.0 937490.0 1037900.0 1072400.0 1070600.0 1215400.0 1473100.0 1041700.0 True False 1178204.2353697484 989560.8596786899 1147383.1587009793 1026588.7677333547 1119576.825156813 1065706.753813418 1178826.6960491028 1211184.0610764911 1205622.173829037 1032471.3484303361 1.1411495700689125 0.9584390512948538 1.111297819978582 0.994302427175413 1.0843659989779892 1.0321901478753959 1.1417524542848287 1.1730921762796145 1.1677052110568895 1.0 19.97767031605267 -6.766302255222849 24.993437562306312 1.1350618261604961 1.0506200127383576 0.17753796491666185 0.0676928447752155 159.75010203441911 821046.0915772504 0.025602519555016183 0.017889965487095944 1.7127648624343245e-07 6.766302255222849 -0.08444181342213852 GPLS(ph)PFNSR ddPTM_KYSE-520_SHP099_60min_R1 11 GPLSPFNSR 9 0 A1L390-3;A1L390;A0A0U1RR71;G3V3I3;G3V278 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 GPLS(0.995)PFNS(0.005)R;GPLS(0.999)PFNS(0.001)R;GPLS(1)PFNSR;GPLS(1)PFNSR;GPLS(1)PFNSR;GPLS(1)PFNSR;GPLS(1)PFNSR;GPLS(1)PFNSR;GPLS(1)PFNSR;GPLS(1)PFNSR;GPLS(1)PFNSR 143.22 0.00037506 27299510000.0 18915080.0 17099200.0 14909250.0 13060640.0 16127890.0 17106800.0 14156070.0 15491020.0 18652300.0 16234530.0 True False 17865822.806122843 16277728.765577534 15870324.110643454 14301919.298775408 17397063.18785846 17000030.115754753 15587103.70552944 15437285.267251251 15265512.506219095 16090704.694473201 1.110319476079836 1.0116231125146788 0.9863038575367402 0.8888311338960685 1.081187152346035 1.056512467200637 0.9687023658375424 0.9593914971638013 0.9487162182189857 1.0 23.939724174670605 -4.274295128673028 2.8017863501975144 0.986875593315605 1.1309872368720892 0.3459837596808051 0.05107184937041878 0.5046180676609803 5.598764128074222 0.014000872172031349 0.16453036869583665 5.3174678320852e-05 4.274295128673028 0.1441116435564842 GPLT(ph)SGSDEENVALPLGDNVLTHNLGIPVLVVCTK ddPTM_KYSE-520_SHP099_60min_R1 2 GPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTK 35 0 O43237;O43237-2;B4E2E0 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 GPLT(0.318)S(0.318)GS(0.318)DEENVALPLGDNVLT(0.047)HNLGIPVLVVCTK;GPLT(0.333)S(0.333)GS(0.333)DEENVALPLGDNVLT(0.001)HNLGIPVLVVCTK 117.6 0.00027551 391870000.0 129279.3 120723.1 123414.5 104574.4 124007.4 130769.1 102574.8 126823.6 129278.4 103580.6 True False 122107.91951710463 114923.38106693263 131369.99614018164 114513.11953456029 133766.0768744107 129952.92154056547 112944.0618175766 126383.67853245081 105804.70140325822 102662.95646848735 1.1894058355370465 1.1194240358956413 1.2796241279151745 1.1154278375931086 1.3029634200673983 1.265820954420447 1.1001442555596483 1.2310543440393187 1.0306025176250915 1.0 16.647556187156273 -7.815478428046542 5.795175829348126 1.0067566682541242 1.1998346184738267 0.5425395615215671 0.06807426151683561 0.15208249053928702 10.448834160495538 0.06271605119621929 0.01668714944839101 1.529401711839831e-08 7.815478428046542 0.19307795021970242 GPPAS(ph)SPAPAPK ddPTM_KYSE-520_SHP099_60min_R1 2 GPPASSPAPAPK 12 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPAS(0.619)S(0.381)PAPAPK;GPPAS(0.613)S(0.387)PAPAPK 125.36 0.00072326 2798800000.0 8666700.0 10024600.0 7197300.0 6338900.0 6412900.0 9233400.0 6552400.0 8939900.0 10300100.0 9589200.0 True False 8185940.874361887 9543003.16876864 7661249.47408716 6941347.150140223 6917558.745590251 9175770.925644167 7214780.53726147 8908889.57348835 8429861.484391049 9504247.148284703 0.8612929300601426 1.004077758067448 0.8060869371931093 0.7303416085295062 0.7278386849229516 0.9654390066340164 0.759111208357368 0.9373587864974868 0.8869573100182315 1.0 23.18014092176848 -7.30122137405323 23.569461471569337 0.9341186680938388 0.838321083464897 0.21936517703658143 0.09050754999679114 509.3451475151106 301765.48256670806 0.05192574014647304 0.02494514292583344 4.997797160261833e-08 7.30122137405323 -0.09579758462894183 GPPASS(ph)PAPAPK ddPTM_KYSE-520_SHP099_60min_R1 8 GPPASSPAPAPK 12 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPAS(0.27)S(0.73)PAPAPK;GPPAS(0.007)S(0.993)PAPAPK;GPPAS(0.002)S(0.998)PAPAPK;GPPAS(0.002)S(0.998)PAPAPK;GPPAS(0.006)S(0.994)PAPAPK;GPPASS(1)PAPAPK;GPPASS(1)PAPAPK;GPPASS(1)PAPAPK 246.49 1.5948e-15 19498710000.0 26183300.0 31592500.0 22584600.0 19578260.0 18835710.0 29840700.0 20714220.0 28298700.0 31104100.0 28615200.0 True False 24730860.153885484 30074748.878690694 24040439.452637672 21438971.943981484 20317973.216470182 29654453.122454334 22808215.508905523 28200538.414666243 25456379.510553088 28361691.590288755 0.8719811396000621 1.0604003919494176 0.8476377149827442 0.7559130200584488 0.7163879189571049 1.0455812562537077 0.8041909431352543 0.9943179279307272 0.8975621016649632 1.0 24.757440246723412 -7.599492059532212 0.9570411506121597 0.9862860439069311 0.8714983286726652 0.109252776598178 0.10884407604954731 1.3118701387180962 2.3471722574559513 0.10610818944400743 0.0388657473536794 2.5148259926547326e-08 7.599492059532212 -0.1147877152342659 GPPASS(ph)PAPAPKFS(ph)PVTPK ddPTM_KYSE-520_SHP099_60min_R1 2 GPPASSPAPAPKFSPVTPK 19 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 2 GPPAS(0.457)S(0.543)PAPAPKFS(0.998)PVT(0.002)PK;GPPAS(0.151)S(0.849)PAPAPKFS(1)PVTPK 138.93 2.1202e-06 3206200000.0 3831300.0 3635100.0 3684100.0 2782400.0 3038600.0 3105600.0 2743900.0 2894600.0 4276700.0 3112100.0 True False 3618770.151492799 3460464.3396036634 3921582.980768417 3046838.459440937 3277720.532730986 3086216.79843617 3021280.189883364 2884559.3082047207 3500159.08683365 3084529.2151771635 1.1732001543985866 1.121877634543626 1.2713716444871397 0.9877807104076782 1.0626323513498401 1.0005471121008362 0.9794947556396651 0.9351700395676242 1.1347466153380603 1.0 21.55661888017086 -5.275542506064373 24.89980139236815 1.0116232853166427 1.1821225951719412 0.6318553190185539 0.060942053657104735 455.1932222518997 803666.4206526809 0.016703295450267466 0.024914740826688847 5.302216952613949e-06 5.275542506064373 0.1704993098552985 GPPASSPAPAPKFS(ph)PVTPK ddPTM_KYSE-520_SHP099_60min_R1 3 GPPASSPAPAPKFSPVTPK 19 1 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 GPPASSPAPAPKFS(0.997)PVT(0.003)PK;GPPASSPAPAPKFS(1)PVTPK;GPPASSPAPAPKFS(1)PVTPK 199.89 2.455e-13 4115150000.0 3669970.0 4964200.0 4104080.0 2353620.0 2855570.0 3620860.0 2352160.0 3130900.0 5151470.0 3541370.0 True False 3466389.448196185 4725712.380583889 4368635.563560173 2577307.3371583438 3080287.113029231 3598260.869650178 2589939.287669395 3120039.6386575564 4216092.905990811 3509996.2169441697 0.9875764057700469 1.3463582546815767 1.2446268581347764 0.7342763860304579 0.8775756219221663 1.025146651805469 0.7378752362087206 0.888901140005754 1.201167364693451 1.0 21.74303804492557 -5.242734344247823 24.564818778491087 0.9135135740560805 1.2082043270013294 0.389327668033276 0.15383383184195734 625.5269827997346 821485.9908948499 0.041385718081886756 0.07151299225359263 5.718283142192388e-06 5.242734344247823 0.29469075294524893 GPPDFS(ph)S(ph)DEEREPTPVLGSGAAAAGR ddPTM_KYSE-520_SHP099_60min_R1 9 GPPDFSSDEEREPTPVLGSGAAAAGR 26 1 P42166;G5E972;P42167;P42167-2;P42167-3 P42166;G5E972 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 GPPDFS(1)S(1)DEEREPTPVLGSGAAAAGR;GPPDFS(1)S(1)DEEREPTPVLGSGAAAAGR;GPPDFS(1)S(1)DEEREPTPVLGSGAAAAGR;GPPDFS(1)S(1)DEEREPTPVLGSGAAAAGR;GPPDFS(1)S(1)DEEREPTPVLGSGAAAAGR;GPPDFS(1)S(1)DEEREPTPVLGSGAAAAGR;GPPDFS(1)S(1)DEEREPTPVLGSGAAAAGR;GPPDFS(1)S(1)DEEREPTPVLGSGAAAAGR;GPPDFS(1)S(1)DEEREPTPVLGSGAAAAGR 182.56 8.8869e-12 43394000000.0 13592220.0 13000390.0 12767090.0 12609220.0 12534110.0 12946500.0 11874410.0 12435780.0 14818780.0 13013710.0 True False 12838232.461181173 12375831.75041678 13590077.04946624 13807596.47769977 13520473.147669563 12865696.091239663 13074791.24587373 12392643.181712884 12128063.103044087 12898418.65391318 0.9953338316620893 0.9594844207248727 1.0536235033232715 1.0704875417817796 1.0482271905143707 0.997463056243442 1.0136739701736261 0.9607877922270068 0.9402751940730829 1.0 23.62069086629406 -7.178053471020414 3.040891242389848 0.9621717086731956 1.022279865446227 0.33919924094320275 0.03349320187905937 0.3171639986649808 5.657501018362384 0.020714074082872607 0.010452151568876683 6.636613543406174e-08 7.178053471020414 0.060108156773031496 GPPDFS(ph)SDEEREPTPVLGSGAAAAGR ddPTM_KYSE-520_SHP099_60min_R1 10 GPPDFSSDEEREPTPVLGSGAAAAGR 26 1 P42166;G5E972;P42167;P42167-2;P42167-3 P42166;G5E972 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 GPPDFS(0.557)S(0.443)DEEREPTPVLGSGAAAAGR;GPPDFS(0.901)S(0.099)DEEREPTPVLGSGAAAAGR;GPPDFS(0.92)S(0.08)DEEREPTPVLGSGAAAAGR;GPPDFS(0.964)S(0.036)DEEREPTPVLGSGAAAAGR;GPPDFS(0.928)S(0.072)DEEREPTPVLGSGAAAAGR;GPPDFS(0.591)S(0.409)DEEREPTPVLGSGAAAAGR;GPPDFS(0.5)S(0.5)DEEREPTPVLGSGAAAAGR;GPPDFS(0.838)S(0.162)DEEREPTPVLGSGAAAAGR;GPPDFS(0.82)S(0.18)DEEREPTPVLGSGAAAAGR;GPPDFS(0.971)S(0.029)DEEREPTPVLGSGAAAAGR 325.98 4.116799999999999e-62 37382230000.0 4992511.0 5188284.0 5051425.0 4121318.0 4640840.0 4578268.0 4675785.0 4765384.0 5769894.0 4388279.0 True False 4715566.462506062 4939031.048866943 5377047.938065773 4513006.823600565 5006047.705232425 4549693.331189715 5148458.979064027 4748853.995152989 4722226.696791204 4349402.262089403 1.0841872465116065 1.13556547572454 1.2362728517740504 1.0376154127975663 1.1509737208872413 1.04605025174289 1.1837164439673524 1.091840604522906 1.0857185452703333 1.0 22.0523857144756 -9.918073328013747 0.30242450024233825 0.9362755368721419 1.1347892278802258 0.2905005789212608 0.05743543572800398 16.917697280965225 1.3527240280453934 0.9955303658334036 0.06264185846024495 1.2076099202134352e-10 9.918073328013747 0.19851369100808391 GPPGS(ph)ADKAGK ddPTM_KYSE-520_SHP099_60min_R1 1 GPPGSADKAGK 11 1 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 1 GPPGS(1)ADKAGK 81.703 0.0057793 0.0 499440.0 452030.0 466040.0 394030.0 415440.0 422760.0 356460.0 360760.0 549550.0 384850.0 True False 471735.06759104383 430313.800289137 496081.6840903643 431478.49273056095 448132.7644697429 420121.3980251407 392494.45551434986 359508.6077620167 449765.5730281363 381440.528408769 1.2367198356161857 1.1281281569219965 1.3005479154505069 1.1311815619869554 1.1748430780001005 1.1014073406875096 1.028979424791838 0.942502385002862 1.1791237153125664 1.0 18.54109861391334 -6.328863092470246 1.6077166267747725 1.0322999968837976 1.2019988541621138 0.5155662110078305 0.07212938089730156 0.30360525451553033 1.5604586800324398 0.03105689306845363 0.02681836188997005 4.6896119475292666e-07 6.328863092470246 0.16969885727831624 GPPNS(ph)PDLK ddPTM_KYSE-520_SHP099_60min_R1 4 GPPNSPDLK 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 GPPNS(1)PDLK;GPPNS(1)PDLK;GPPNS(1)PDLK;GPPNS(1)PDLK 102.66 0.0020818 2617890000.0 4363210.0 4292420.0 3474290.0 3177570.0 3628150.0 4021650.0 3757600.0 4292340.0 5240540.0 4384430.0 True False 4121174.0434565064 4086205.7001462225 3698248.2924605454 3479565.2974287393 3913664.7636503363 3996549.3905946775 4137454.878641986 4277450.874379693 4288990.039262799 4345587.361234922 0.9483583462663049 0.9403114839198656 0.8510353112334125 0.800712310715098 0.9006066242189542 0.9196799093825937 0.9521048674686431 0.9843205345581025 0.9869759097522689 1.0 22.05111975807178 -6.799734516655404 1.5960908129549987 0.9907345407284703 0.8848899144242444 0.5611679138629826 0.039705158971380154 0.3294334627026391 1.7040363332561053 0.026092586419711714 0.015250611424129203 1.5858623306726745e-07 6.799734516655404 -0.10584462630422597 GPPPAPRPT(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 GPPPAPRPTSR 11 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 GPPPAPRPT(0.5)S(0.5)R 92.792 0.008425700000000001 466700000.0 502750.0 472260.0 500760.0 459870.0 461460.0 464760.0 472640.0 445830.0 607600.0 487660.0 True False 474861.45529272256 449571.92072328815 533039.7908443292 503575.9065350428 497774.27665176045 461859.2604460313 520419.0637218831 444283.5197875045 497275.1563495505 483339.7117937384 0.9824590111382491 0.9301365266571342 1.1028263927789983 1.0418674366031402 1.029864222835019 0.9555582733560413 1.0767148881488307 0.9191951518709457 1.02883157376847 1.0 18.882678007696626 -8.84326063168442 11.920240686893846 1.0 1.0076036271682927 0.0015207973418412957 0.057551794666138224 0.0 0.0 0.05499327153603023 0.013337827484783875 1.434628216361216e-09 8.84326063168442 0.007603627168292659 GPPQS(ph)PVFEGVYNNSR ddPTM_KYSE-520_SHP099_60min_R1 13 GPPQSPVFEGVYNNSR 16 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7;H3BSK9 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR;GPPQS(1)PVFEGVYNNSR 263.19 2.5391e-29 87129600000.0 22867358.0 23350993.0 18553945.0 15761209.0 16606964.0 23249769.0 19526416.0 24195233.0 25683720.0 25747052.0 True False 21598860.06679197 22229176.24572491 19749961.98206164 17259149.56457973 17913837.586100258 23104658.567607082 21500336.68873557 24111305.383932814 21020203.88189284 25518953.15018337 0.8463850354549818 0.8710849584974131 0.7739330789092234 0.6763267075654203 0.7019816792904585 0.9053920994185085 0.8425242431459645 0.9448391257287747 0.8237094898911165 1.0 24.605065811652235 -6.281511902374608 24.494450796555622 0.8960474055388749 0.7739155065677256 0.45019553553604674 0.07124843131748508 685.183049193925 836124.3255159762 0.026806423825886053 0.023672733202316183 5.229836329758357e-07 6.281511902374608 -0.12213189897114929 GPPS(ph)PPAPVMHS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 12 GPPSPPAPVMHSPSR 15 0 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 2 GPPS(1)PPAPVMHS(0.963)PS(0.037)R;GPPS(1)PPAPVMHS(0.77)PS(0.23)R;GPPS(1)PPAPVMHS(0.647)PS(0.353)R;GPPS(1)PPAPVMHS(0.697)PS(0.303)R;GPPS(1)PPAPVMHS(0.954)PS(0.046)R;GPPS(1)PPAPVMHS(0.681)PS(0.319)R;GPPS(1)PPAPVMHS(0.665)PS(0.335)R;GPPS(1)PPAPVMHS(0.656)PS(0.344)R;GPPS(1)PPAPVMHS(0.626)PS(0.374)R;GPPS(1)PPAPVMHS(0.599)PS(0.401)R;GPPS(1)PPAPVMHS(0.894)PS(0.106)R;GPPS(1)PPAPVMHS(0.929)PS(0.071)R 200.71 1.9672000000000003e-11 10168410000.0 4148350.0 4319850.0 4107210.0 4115430.0 3990320.0 3809020.0 3549530.0 3805600.0 4473280.0 3786810.0 True False 3918232.755969296 4112317.921772952 4371967.328368349 4506559.229850851 4304335.482184919 3785246.4932957673 3908351.1324744695 3792399.2618337157 3661045.1142121716 3753261.8094935995 1.0439540204891689 1.095665085598651 1.1648447537845028 1.200704735931781 1.1468252684364888 1.008521836585251 1.041321210950055 1.0104275838794727 0.9754302524145338 1.0 21.839713498526976 -6.2645881828135055 24.753524322573263 1.0099282089553454 1.1342886785737578 0.6847879595608349 0.04174984080297101 159.2945627733566 1252249.483503376 0.016043564489935047 0.01472998112985374 5.437657097356339e-07 6.2645881828135055 0.1243604696184124 GPPS(ph)PPAPVMHS(ph)PSRK ddPTM_KYSE-520_SHP099_60min_R1 8 GPPSPPAPVMHSPSRK 16 1 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 2 GPPS(1)PPAPVMHS(0.618)PS(0.382)RK;GPPS(1)PPAPVMHS(0.893)PS(0.107)RK;GPPS(1)PPAPVMHS(0.922)PS(0.078)RK;GPPS(1)PPAPVMHS(0.934)PS(0.066)RK;GPPS(1)PPAPVMHS(0.925)PS(0.075)RK;GPPS(1)PPAPVMHS(0.865)PS(0.135)RK;GPPS(1)PPAPVMHS(0.887)PS(0.113)RK;GPPS(1)PPAPVMHS(0.897)PS(0.103)RK 144.92 8.5582e-06 15271050000.0 6202260.0 6794570.0 6737790.0 7633070.0 6362210.0 6353110.0 5656810.0 5800510.0 7642780.0 6177880.0 True False 5858208.273901215 6468148.65834251 7172118.724245172 8358514.677833811 6862879.730976895 6313457.883923508 6228655.559945383 5780389.3846592065 6255043.810805163 6123148.789517906 0.9567313281574609 1.056343538379339 1.1713121746319437 1.3650680336467707 1.1208089117032922 1.0310802662073784 1.0172308029829509 0.9440223622451471 1.0215403913609034 1.0 22.5458423096251 -6.328170438688212 3.2994770284556427 0.9950730902220337 1.1454602783890502 0.311393195982682 0.09829817558976238 0.33616957483150756 7.234046780869437 0.04050379200785249 0.03601656057153776 4.6970973503938913e-07 6.328170438688212 0.15038718816701646 GPPS(ph)PPAPVMHSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 GPPSPPAPVMHSPSR 15 0 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 2 GPPS(1)PPAPVMHS(0.203)PS(0.797)R;GPPS(1)PPAPVMHS(0.062)PS(0.938)R;GPPS(1)PPAPVMHS(0.314)PS(0.686)R;GPPS(1)PPAPVMHS(0.054)PS(0.946)R 186.17 6.0369e-11 4824760000.0 1446190.0 1480200.0 1323110.0 1472090.0 1323880.0 1326230.0 1199360.0 1220500.0 1553760.0 1327310.0 True False 1365966.9577917084 1409088.9701745035 1408399.78765085 1611996.991000002 1428061.824153195 1317952.506629959 1320603.013425604 1216266.3703668409 1271636.3511021691 1315551.0660315545 1.038323021478928 1.0711016900507802 1.0705778164122353 1.2253397322406465 1.0855236721908763 1.0018254256033166 1.003840175820228 0.9245299568915919 0.9666187683144396 1.0 20.327235820321764 -6.360814817627938 2.7361566228353964 0.9695960175033003 1.1030758946645347 0.5861313375469794 0.05040827173391241 0.21064694840715617 3.0706196938861585 0.020960676561622052 0.018234978749776767 4.356976147482681e-07 6.360814817627938 0.13347987716123444 GPPS(ph)PPAPVMHSPSR ddPTM_KYSE-520_SHP099_60min_R1 3 GPPSPPAPVMHSPSR 15 0 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 1 GPPS(1)PPAPVMHSPSR;GPPS(0.991)PPAPVMHS(0.004)PS(0.004)R;GPPS(1)PPAPVMHSPSR 204.05 6.5077e-12 2792680000.0 2305690.0 2670920.0 2319540.0 2408530.0 1740140.0 2118770.0 1825960.0 2150150.0 2702730.0 2375440.0 True False 2177788.779420936 2542604.9940673476 2469061.259795221 2637435.9670490534 1877079.1179577755 2105545.9705121755 2010545.856452286 2142691.631498782 2211982.3622788377 2354395.449664353 0.9249885271955507 1.0799396483839732 1.0487028677137544 1.120217917268338 0.7972658621241285 0.8943042982912434 0.8539541888508633 0.9100814528860256 0.9395118235529134 1.0 21.16692522842383 -5.75664720560377 24.999953359369474 0.8921846402797721 1.0464420980240274 0.5190703477329126 0.06780932077677757 90.54468845731978 472352.9000154427 0.01979338298263013 0.02472900176547161 1.751268735053491e-06 5.75664720560377 0.15425745774425537 GPQPPTVS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 11 GPQPPTVSPIR 11 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GPQPPT(0.015)VS(0.985)PIR;GPQPPTVS(1)PIR;GPQPPTVS(1)PIR;GPQPPTVS(1)PIR;GPQPPTVS(1)PIR;GPQPPTVS(1)PIR;GPQPPT(0.041)VS(0.959)PIR;GPQPPTVS(1)PIR;GPQPPTVS(1)PIR;GPQPPT(0.001)VS(0.999)PIR;GPQPPT(0.028)VS(0.972)PIR 162.31 1.972e-05 54497830000.0 5825890.0 5995550.0 4923330.0 3666800.0 3830170.0 5728950.0 4045930.0 4855130.0 5621280.0 5714460.0 True False 5502716.268076217 5707514.778495978 5240695.729406526 4015291.5695363795 4131582.5883137723 5693193.498003895 4454932.088871612 4838288.687225857 4600597.252937132 5663834.330182608 0.9715531824001644 1.0077121691361268 0.9252911409288274 0.7089352081043165 0.729467415086021 1.0051836205139038 0.786557626717867 0.8542426217240477 0.8122760986175955 1.0 22.433347635853924 -5.010213869772965 18.59311861850906 0.8346023620487717 0.9838512845605485 0.28932824980987604 0.09338791068666255 19.1840242400806 34931.922201063964 0.024698649637774097 0.0467346468799798 9.76756095687158e-06 5.010213869772965 0.1492489225117768 GPRPGS(ph)PSALLPGPGRPPPPPTKPPETEAQR ddPTM_KYSE-520_SHP099_60min_R1 1 GPRPGSPSALLPGPGRPPPPPTKPPETEAQR 31 3 Q9UJJ7;H3BSG4;H3BMZ6;H3BQN8 Q9UJJ7 RPUSD1 RNA pseudouridylate synthase domain-containing protein 1 1 GPRPGS(0.871)PS(0.129)ALLPGPGRPPPPPTKPPETEAQR 204.68 2.7091e-16 673940000.0 268590.0 258400.0 255500.0 257350.0 241940.0 224030.0 257270.0 278570.0 305790.0 292050.0 True False 253690.77727910946 245986.07613369287 271969.9388144544 281808.4666249014 260979.30154970524 222631.74567029104 283277.3623132381 277603.7056887271 250266.24433859324 289462.6642114616 0.8764196860075203 0.8498024323924286 0.9395682844118777 0.9735572198666402 0.9015991829573282 0.7691207647686527 0.9786317799738589 0.9590311290921057 0.864589030921673 1.0 18.143017751388438 -13.999999999999972 0.2140704968571049 1.4740641897853846 0.8901122605606041 0.18581546149853345 0.06175736377921737 277.0184979202567 2.7671399109003176 56.465996680060144 0.13296639980627595 1.0000000000000655e-14 13.999999999999972 -0.5839519292247805 GPRQDPS(ph)AIVEK ddPTM_KYSE-520_SHP099_60min_R1 1 GPRQDPSAIVEK 12 1 O75509 O75509 TNFRSF21 Tumor necrosis factor receptor superfamily member 21 1 GPRQDPS(1)AIVEK 49.482 0.056177 2013900000.0 214210.0 2799700.0 1596600.0 1099100.0 2419400.0 1241000.0 1847100.0 1781700.0 3812700.0 597540.0 True False 202327.34428295188 2665198.209564625 1699519.3906503203 1203558.1335435354 2609793.015497051 1233254.4586744234 2033822.8939588028 1775519.6985519042 3120409.7903455133 592246.2604790861 0.34162705243471375 4.500152026977198 2.86961607706147 2.032192035404226 4.4066010875035495 2.082333888738793 3.434083133447869 2.997941594625911 5.2687707775838355 1.0 19.17583765856452 GPRT(ph)PPITTK ddPTM_KYSE-520_SHP099_60min_R1 1 GPRTPPITTK 10 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 GPRT(1)PPITTK 95.631 0.0076666 2110600000.0 3212400.0 3344400.0 2872400.0 2322300.0 2203200.0 2923700.0 2229700.0 2600200.0 3780700.0 3098400.0 True False 3034201.768239363 3183730.003953254 3057559.500002493 2543010.6937750434 2376579.305506784 2905452.1038085525 2455099.835774971 2591180.5130912396 3094220.1836911566 3070950.586518725 0.988033406190029 1.0367245952864312 0.9956394327622796 0.8280858392638085 0.773890441591543 0.9461083862968359 0.7994592444934481 0.843771477296429 1.0075773271229382 1.0 21.550253867975336 -5.182155643895852 6.151684204609511 0.8735029529365057 1.012043374501413 0.3365354990436805 0.07676767953625446 0.2385427877511326 14.861008522506408 0.020520147175772958 0.03592763095267933 6.574221859892061e-06 5.182155643895852 0.1385404215649073 GPRT(ph)PS(ph)PPPPIPEDIALGK ddPTM_KYSE-520_SHP099_60min_R1 6 GPRTPSPPPPIPEDIALGK 19 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 GPRT(1)PS(1)PPPPIPEDIALGK;GPRT(1)PS(1)PPPPIPEDIALGK;GPRT(1)PS(1)PPPPIPEDIALGK;GPRT(1)PS(1)PPPPIPEDIALGK;GPRT(1)PS(1)PPPPIPEDIALGK;GPRT(1)PS(1)PPPPIPEDIALGK 130.78 8.7403e-06 6078880000.0 10140440.0 9102190.0 8949810.0 7295640.0 9563020.0 9316290.0 8680020.0 9063260.0 11400330.0 9989420.0 True False 9577929.578734031 8664907.129734274 9526729.072802305 7989015.432085843 10315575.267859235 9258143.578407686 9557481.130431646 9031821.666440787 9330317.450932305 9900921.51045117 0.967377588906629 0.8751616827370877 0.9622063019837218 0.8068961483689002 1.0418803196218016 0.9350789791268436 0.9653122813207845 0.9122203076660105 0.9423685907502096 1.0 23.23913137701012 -5.772225985051028 24.999999717847793 0.9601596225078548 0.9051637796656091 0.24265217051565313 0.05405265985408515 344.88153390680577 799325.6720968478 0.016006798493934507 0.01832877985492162 1.6895615398416331e-06 5.772225985051028 -0.05499584284224568 GPS(ph)PAPAS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 2 GPSPAPASSPK 11 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 GPS(1)PAPAS(0.553)S(0.447)PK;GPS(1)PAPAS(0.528)S(0.472)PK 105.03 0.00097745 2774800000.0 5893500.0 4940700.0 5072600.0 4732100.0 4922300.0 5047000.0 4701800.0 5305900.0 6226800.0 4877000.0 True False 5566575.806599025 4703341.355858102 5399587.912446971 5181837.361242256 5309657.005944089 5015499.800910405 5177103.829145963 5287495.071306366 5096170.084854147 4833793.574248586 1.1515956817548523 0.9730124556651631 1.1170497518165818 1.0720022031656107 1.0984451289419153 1.037590812241101 1.0710229449445916 1.0938603376600142 1.0542796266690697 1.0 22.20472443387022 -8.025838411666372 17.20156150707345 0.9999999965109586 1.0737814140030075 0.20761234196425504 0.0451813996171964 54.102818328695534 36020.317700188236 0.04001849517301116 0.01033272433357178 9.422401114257699e-09 8.025838411666372 0.07378141749204892 GPS(ph)PAPAS(ph)SPKR ddPTM_KYSE-520_SHP099_60min_R1 6 GPSPAPASSPKR 12 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 GPS(1)PAPAS(0.853)S(0.147)PKR;GPS(1)PAPAS(0.57)S(0.43)PKR;GPS(1)PAPAS(0.627)S(0.373)PKR;GPS(1)PAPAS(0.789)S(0.212)PKR;GPS(1)PAPAS(0.5)S(0.5)PKR;GPS(0.997)PAPAS(0.808)S(0.195)PKR 82.925 0.0083045 8793860000.0 16004400.0 14545600.0 14849500.0 13856300.0 14479800.0 13807800.0 13546600.0 14252500.0 17614000.0 13883800.0 True False 15116604.028019588 13846807.54260927 15806722.530040063 15173198.585951505 15619277.88120785 13721620.39845664 14916022.530075427 14203061.404058518 14415741.61280611 13760800.333432943 1.0985265145728926 1.0062501603898262 1.148677558501913 1.1026392519544834 1.135055919913291 0.9971527866092853 1.08395021863923 1.0321391968424298 1.0475947084111044 1.0 23.714061044389414 -6.260628330851086 24.999998298952477 1.0374125098803781 1.0961675096529457 0.37763024752825436 0.04209510540326211 94.90950076612533 2925591.6763748745 0.014381805053076341 0.013614364906411627 5.487463810951984e-07 6.260628330851086 0.058754999772567595 GPS(ph)PAPASS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 GPSPAPASSPK 11 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 GPS(0.996)PAPAS(0.135)S(0.869)PK;GPS(1)PAPASS(1)PK;GPS(1)PAPAS(0.102)S(0.898)PK 197.13 5.2051e-07 3361590000.0 10724000.0 9185900.0 9604100.0 8797400.0 9338200.0 9284900.0 9009600.0 9715400.0 11560400.0 9117100.0 True False 10129118.342236001 8744595.575682996 10223195.653103316 9633502.250965236 10073063.212910054 9226949.49504122 9920378.29322247 9681699.544991395 9461322.773968631 9036329.586996473 1.1209328128991753 0.96771543041842 1.131343822143758 1.0660857550866794 1.1147295055954431 1.0210948379216993 1.0978327204331022 1.071419479754659 1.0470316164190974 1.0 23.10730546122093 -8.08949680157272 2.6030478263856107 1.0001150420610028 1.0724004986222264 0.1900808082780523 0.046805659300719046 0.6387469393372024 9.59643735862062 0.04191884715525136 0.011333499210760505 8.137728539097616e-09 8.08949680157272 0.07228545656122365 GPS(ph)PAPASS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 4 GPSPAPASSPKR 12 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 GPS(0.64)PAPAS(0.4)S(0.96)PKR;GPS(1)PAPAS(0.481)S(0.52)PKR;GPS(1)PAPAS(0.012)S(0.989)PKR;GPS(1)PAPAS(0.123)S(0.877)PKR 136.33 4.7611e-05 6557800000.0 12552070.0 11069220.0 10949740.0 10317310.0 10569100.0 10526000.0 10135080.0 10410410.0 13056070.0 9960540.0 True False 11855781.65516882 10537438.055962052 11655577.760603437 11297864.040387636 11400828.040047089 10460303.32957854 11159632.795248779 10374298.71751796 10685416.804741075 9872297.36478285 1.2009141557528034 1.0673744587102836 1.1806347934961958 1.1444007025852125 1.1548302911454957 1.0595612088117672 1.130398769698551 1.050849496746916 1.0823637507981518 1.0 23.234954420075322 -7.565470086922161 0.3860959235790444 0.9945774733746717 1.1583798967353585 0.5641220748096616 0.040432314539344025 0.8514633557793425 0.3773304731127218 0.05266644656504412 0.03885768842302074 2.7197558093758167e-08 7.565470086922161 0.16380242336068673 GPS(ph)PEPPPS(ph)PLQVPTYPQLTLEVPQAPEVLR ddPTM_KYSE-520_SHP099_60min_R1 4 GPSPEPPPSPLQVPTYPQLTLEVPQAPEVLR 31 0 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 2 GPS(1)PEPPPS(0.999)PLQVPT(0.001)YPQLTLEVPQAPEVLR;GPS(0.999)PEPPPS(0.953)PLQVPT(0.032)Y(0.01)PQLT(0.006)LEVPQAPEVLR;GPS(1)PEPPPS(0.998)PLQVPT(0.002)Y(0.001)PQLTLEVPQAPEVLR;GPS(1)PEPPPS(0.995)PLQVPT(0.005)YPQLTLEVPQAPEVLR 138.78 1.4575e-06 345923000.0 80833.3 92704.6 82965.2 97215.5 107054.0 149158.9 138565.4 173507.8 238858.7 172494.7 True False 76349.31571181142 88250.93186355854 88313.26954101343 106454.83189109423 115478.54074606157 148227.94397741527 152572.94289998335 172905.94193882492 195487.98121782503 170966.5311568458 0.4465746318603614 0.516188351406607 0.5165529705927897 0.6226647471336474 0.6754453047896305 0.8669997746016733 0.8924140992251398 1.0113438037775937 1.1434283651604482 1.0 17.383354401536497 -6.270755114779646 0.7398929182876189 1.0775790552095073 0.4650698757393839 0.96035771260728 0.046219973647756867 0.11816976714549017 0.14127848908926047 0.03256129493121837 0.031891647611667566 5.360988618636643e-07 6.270755114779646 -0.6125091794701234 down GPS(ph)PPGAK ddPTM_KYSE-520_SHP099_60min_R1 4 GPSPPGAK 8 0 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 GPS(1)PPGAK;GPS(1)PPGAK;GPS(1)PPGAK;GPS(1)PPGAK 69.27600000000001 0.032808 2885820000.0 6257600.0 5759000.0 4911300.0 4355930.0 4800500.0 5857100.0 5235200.0 5899000.0 6526400.0 6116700.0 True False 5910478.453783662 5482328.995564766 5227890.256357838 4769916.277541891 5178272.038891301 5820543.666319068 5764425.106628298 5878537.745836947 5341370.2771555465 6062510.796720597 0.9749225447946132 0.9043000795199129 0.8623308776927489 0.7867889126271064 0.854146444026523 0.9600879670956765 0.9508313139411574 0.9696539837944426 0.8810491983032611 1.0 22.531483980808027 -6.2652048549427795 24.83149546031316 0.9503345457915384 0.8722714682731396 0.3454147204131255 0.051993662466190305 372.63881482490257 2457361.13137966 0.019170936766167126 0.017543567073544458 5.429941429443377e-07 6.2652048549427795 -0.0780630775183988 GPS(ph)PRPPATAYDAPASAFGSSLLGSGGSAFAPPLR ddPTM_KYSE-520_SHP099_60min_R1 3 GPSPRPPATAYDAPASAFGSSLLGSGGSAFAPPLR 35 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 GPS(0.995)PRPPAT(0.003)AY(0.002)DAPASAFGSSLLGSGGSAFAPPLR;GPS(1)PRPPATAYDAPASAFGSSLLGSGGSAFAPPLR;GPS(0.997)PRPPAT(0.002)AY(0.001)DAPASAFGSSLLGSGGSAFAPPLR 238.14 2.9574e-31 1841325000.0 238153.0 333182.0 296031.0 263835.0 251536.0 339779.0 192662.0 272204.0 338814.0 293418.0 True False 224942.1783437645 317175.4366036221 315113.6319263474 288909.7990751146 271330.45215593366 337658.3132263793 212138.15515992153 271259.7878568913 277293.91840588674 290818.54479574965 0.7734794852981194 1.0906300243898945 1.0835403641389543 0.9934366437258132 0.9329888241704013 1.161061834841126 0.7294519519341944 0.9327458400130739 0.95349462188059 1.0 18.149759743803706 -6.756024450865304 24.999885695014285 0.8983185996656274 1.0093639397591547 0.15022447073209244 0.11829270591820791 241.5066955178824 1115005.015130413 0.044941567558527414 0.033783566639970515 1.753781760801905e-07 6.756024450865304 0.11104534009352729 GPS(ph)PSLLNTISLDTMPK ddPTM_KYSE-520_SHP099_60min_R1 1 GPSPSLLNTISLDTMPK 17 0 O60307 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 GPS(0.991)PS(0.009)LLNTISLDTMPK 137.14 0.00011801 0.0 73810.0 83833.0 51551.0 51122.0 36268.0 78310.0 50159.0 75310.0 59445.0 69872.0 True False 69715.61216341285 79805.53684410156 54874.059944516324 55980.61950961027 39122.08526330789 77821.23824238035 55229.56122466552 75048.76718748607 48651.2864865027 69252.98843959336 1.0066801987068474 1.152376794738797 0.792371003489341 0.808349513442874 0.5649154808305858 1.1237238998034105 0.7975043744551195 1.0836899443400645 0.7025153366332962 1.0 16.079588707952517 -4.762715753420582 24.999946073946273 0.8570497022066369 1.0795285231204526 0.22161257795016132 0.1651827751397546 45.52587820319559 891785.5092298812 0.04167746682987332 0.09527697873844072 1.7269678259642515e-05 4.762715753420582 0.22247882091381566 GPS(ph)PSPVGSPASVAQSR ddPTM_KYSE-520_SHP099_60min_R1 6 GPSPSPVGSPASVAQSR 17 0 O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 GPS(0.998)PS(0.002)PVGSPASVAQSR;GPS(0.941)PS(0.059)PVGSPASVAQSR;GPS(0.99)PS(0.01)PVGSPASVAQSR;GPS(0.986)PS(0.014)PVGSPASVAQSR;GPS(0.649)PS(0.351)PVGSPASVAQSR;GPS(0.976)PS(0.024)PVGSPASVAQSR 236.67 3.4086e-23 6999850000.0 2886750.0 3288670.0 3355710.0 2450570.0 2654750.0 3012640.0 2881230.0 3395330.0 4168870.0 3324700.0 True False 2726616.2229065425 3130677.3568056887 3572024.435925842 2683471.4360092646 2863663.721538731 2993836.9962779307 3172492.8464950104 3383552.3927059774 3411908.2966605537 3295245.744577458 0.8274394185603205 0.9500588421842051 1.0839933385253107 0.8143463777853569 0.8690288808508672 0.9085322395771195 0.9627484844538694 1.0267981980627192 1.0354032934493798 1.0 21.651954628264058 -7.037825400393911 2.8646943535645715 1.0232821026186292 0.912827955599091 0.3317985954225172 0.07100899857877276 0.3553190381993877 5.793697728287761 0.039397425547847274 0.021861211994510767 9.165889127117354e-08 7.037825400393911 -0.11045414701953815 GPS(ph)PTPEDVSMK ddPTM_KYSE-520_SHP099_60min_R1 1 GPSPTPEDVSMK 12 0 H1UBN3;O95067 H1UBN3 CCNB2V;CCNB2 G2/mitotic-specific cyclin-B2 1 GPS(0.995)PT(0.005)PEDVSMK 197.38 2.9293999999999997e-08 0.0 357320.0 389550.0 303130.0 279080.0 288700.0 410520.0 335840.0 376980.0 403140.0 391520.0 True False 337498.7473002393 370835.43327352946 322670.2448251484 305603.6792915382 311419.04752169905 407957.7924053377 369789.98468254274 375672.3443677939 329939.93833238643 388051.4373979504 0.8697268319976126 0.9556347368795706 0.8315141079976133 0.7875339448314909 0.8025200205671082 1.0512982380399565 0.952940638906382 0.9680993501450128 0.8502479479132297 1.0 18.565888373139014 -6.24786561374977 24.92902601948465 0.9617999113739908 0.850859540156444 0.45219862941268174 0.06331360025989002 798.0343562264597 1465638.1820088497 0.022213498248615682 0.02210248214792461 5.651118135730561e-07 6.24786561374977 -0.11094037121754674 GPS(ph)PTPEDVSMKEENLCQAFSDALLCK ddPTM_KYSE-520_SHP099_60min_R1 11 GPSPTPEDVSMKEENLCQAFSDALLCK 27 1 H1UBN3;O95067 H1UBN3 CCNB2V;CCNB2 G2/mitotic-specific cyclin-B2 1 GPS(0.503)PT(0.458)PEDVS(0.039)MKEENLCQAFSDALLCK;GPS(0.748)PT(0.241)PEDVS(0.001)MKEENLCQAFS(0.01)DALLCK;GPS(0.841)PT(0.159)PEDVSMKEENLCQAFSDALLCK;GPS(0.986)PT(0.014)PEDVSMKEENLCQAFSDALLCK;GPS(0.998)PT(0.002)PEDVSMKEENLCQAFSDALLCK;GPS(0.875)PT(0.125)PEDVSMKEENLCQAFSDALLCK;GPS(0.973)PT(0.026)PEDVSMKEENLCQAFSDALLCK;GPS(0.977)PT(0.023)PEDVSMKEENLCQAFSDALLCK;GPS(0.75)PT(0.19)PEDVS(0.06)MKEENLCQAFSDALLCK;GPS(0.969)PT(0.031)PEDVSMKEENLCQAFSDALLCK;GPS(0.83)PT(0.17)PEDVSMKEENLCQAFSDALLCK 315.62 1.1278999999999997e-64 2869563000.0 1023363.6 1119693.0 873651.2 704685.0 742618.2 907173.2 697754.1 928767.3 1165493.0 925231.0 True False 966595.581083241 1065901.267586543 929968.1542433447 771658.0505287296 801058.0274204324 901511.1955599864 768289.8938517792 925545.623012217 953868.8508876025 917034.1731588267 1.05404532281899 1.162335383767572 1.0141041429677211 0.8414714228921996 0.8735312716439984 0.9830726290762212 0.8377985426707915 1.009281496919653 1.0401671811224817 1.0 19.806615971101365 -4.9877334769518935 6.528005470517889 0.935059806600967 1.1048567957725022 0.4659654091229978 0.07141485386309049 0.12281248368142025 23.226019176381335 0.019369823515087703 0.039144166257611766 1.0286473771262025e-05 4.9877334769518935 0.16979698917153518 GPS(ph)PWGFR ddPTM_KYSE-520_SHP099_60min_R1 4 GPSPWGFR 8 0 P50479;P50479-2 P50479 PDLIM4 PDZ and LIM domain protein 4 1 GPS(1)PWGFR;GPS(1)PWGFR;GPS(1)PWGFR;GPS(1)PWGFR 103.26 0.0021655999999999997 1504410000.0 1350610.0 1124500.0 1065480.0 899840.0 1084900.0 1071330.0 963770.0 988640.0 1214260.0 1028810.0 True False 1275688.9709257137 1070477.3320910896 1134162.5456282755 985360.5230532379 1170275.4577633936 1064643.432080314 1061197.2770887744 985210.6385903108 993780.9930036295 1019695.5438020682 1.2510488828549162 1.0498009318543011 1.1122560577242517 0.9663281643648185 1.1476714445567433 1.0440797143338019 1.0407001222462555 0.9661811749385744 0.9745859919110631 1.0 19.95970703229233 -1.0000000000000002 0.7149950072996945 1.0209698359553836 30.566750443372218 0.5743691949199363 0.05683571362199891 241.84898934102478 1.2053384017461746 0.0221999168097888 11451.23861879225 0.09999999999999995 1.0000000000000002 29.545780607416834 GPS(ph)WDPFR ddPTM_KYSE-520_SHP099_60min_R1 13 GPSWDPFR 8 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 GPS(1)WDPFR;GPS(1)WDPFR;GPS(1)WDPFR;GPS(1)WDPFR;GPS(1)WDPFR;GPS(1)WDPFR;GPS(1)WDPFR;GPS(1)WDPFR;GPS(1)WDPFR;GPS(1)WDPFR;GPS(1)WDPFR;GPS(1)WDPFR;GPS(1)WDPFR 120.45 0.00094524 30302508000.0 12254660.0 12769300.0 12047450.0 15213380.0 17104100.0 19510530.0 19200790.0 21432160.0 21908850.0 18770620.0 True False 11574869.580740934 12155843.66088995 12824047.903601533 16659255.061130514 18450095.360983364 19388757.54520635 21141793.23485209 21357816.839263726 17930755.117164 18604326.91012139 0.6221600833322172 0.6533879843982292 0.6893045884194183 0.8954505659684635 0.9917099097493219 1.0421638814924394 1.1363911920592102 1.1480026631678002 0.9637948851247641 1.0 24.149134860050342 -5.443210619156551 1.3495977877755059 1.0724466718779728 0.6214606967531724 0.9153683407824016 0.053679661419628655 0.11361420783989566 0.4138119050408481 0.019289979464629677 0.03801199656439945 3.6040381612332313e-06 5.443210619156551 -0.45098597512480043 GPS(ph)WDPFRDWYPHSR ddPTM_KYSE-520_SHP099_60min_R1 3 GPSWDPFRDWYPHSR 15 1 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 GPS(1)WDPFRDWYPHSR;GPS(1)WDPFRDWYPHSR;GPS(1)WDPFRDWYPHSR 64.5 0.01879 1927700000.0 485327.0 646587.0 607778.0 596331.0 739247.0 658981.0 590066.0 625295.0 962050.0 554617.0 True False 458404.94383461104 615523.9899731269 646956.3423591836 653006.1189465475 797421.5331599358 654868.0551424096 649715.6297692035 623125.9975899508 787365.9713069205 549703.5248654961 0.833913051488574 1.1197381172400815 1.1769186717830922 1.1879241980599051 1.4506392938903794 1.1913113624342242 1.1819382637726015 1.1335674038881596 1.432346593556184 1.0 19.068294204839713 -4.02774274674326 1.3358961569504175 1.2341082192364246 0.46611263463691 0.46025254513675395 0.12602432320168866 1.9377014842234337 2.0552078634718653 0.03537620414338122 2.334275444678081 9.381175339662787e-05 4.02774274674326 -0.7679955845995146 GPSLDIDT(ph)PDVNIEGPEGK ddPTM_KYSE-520_SHP099_60min_R1 4 GPSLDIDTPDVNIEGPEGK 19 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 GPSLDIDT(1)PDVNIEGPEGK;GPSLDIDT(1)PDVNIEGPEGK;GPSLDIDT(1)PDVNIEGPEGK;GPSLDIDT(1)PDVNIEGPEGK 407.49 1.6788999999999994e-106 980900000.0 1838500.0 2056070.0 1560800.0 1518540.0 1431760.0 2732740.0 1956590.0 2627970.0 2776260.0 2706180.0 True False 1736514.740041114 1957293.3109760107 1661411.6653682962 1662861.5850342992 1544431.3663999608 2715683.956001564 2154381.211678227 2618854.185442809 2272161.167819297 2682205.3505761833 0.647420504052041 0.7297328336756732 0.6194200101089936 0.619960580079034 0.5758065340031444 1.0124817458209114 0.8032126291953855 0.9763809414816933 0.847124239511042 1.0 21.354988264029945 -6.257883668823893 24.99937810801407 0.9185745177359896 0.6414519283340923 0.8059486989809875 0.07091511518980267 134.5238259038644 945807.9702527198 0.023043642652269852 0.02216446314326562 5.522253398938951e-07 6.257883668823893 -0.2771225894018974 GPSPAPAS(ph)S(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 1 GPSPAPASSPKR 12 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 GPS(0.404)PAPAS(0.619)S(0.976)PKR 91.20200000000001 0.0074199 456490000.0 1140100.0 967470.0 1054900.0 893500.0 1035100.0 950660.0 960250.0 974840.0 1233200.0 955130.0 True False 1076856.3802669963 920991.2889979237 1122900.5418996788 978417.9713594295 1116556.4810866336 944726.5783105786 1057321.4411368852 971458.5075693657 1009281.9664421756 946668.2912798949 1.137522393203946 0.9728764525879958 1.186160508641858 1.0335383368937066 1.1794590474526723 0.9979488982707014 1.1168869295362025 1.0261868032528632 1.0661410926499155 1.0 19.852499474198577 -7.9467197330574075 0.6101113534168413 1.000792393733187 1.0907121166534905 0.13710644125860538 0.06888592147493862 1.6700713190297296 1.4842168669001345 0.06562881036328218 0.028854255659830328 1.1305252507646963e-08 7.9467197330574075 0.08991972292030348 GPSPAPASS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 2 GPSPAPASSPKR 12 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 GPSPAPAS(0.059)S(0.941)PKR;GPSPAPAS(0.067)S(0.933)PKR 97.084 0.0019445999999999999 2270880000.0 2455300.0 2368000.0 2096100.0 1643710.0 1748600.0 2199800.0 1956660.0 1981980.0 2561000.0 2148000.0 True False 2319099.614480796 2254237.7255595373 2231217.9598785806 1799927.7042005702 1886204.8718269577 2186070.2322256225 2154458.287961362 1975104.9739776112 2095986.957556288 2128970.3911187146 1.0893057151735086 1.0588393971862606 1.0480267688016731 0.8454451558881279 0.8859704576895546 1.0268204017045552 1.0119719358000343 0.9277277796896689 0.9845073310084436 1.0 21.021724454819765 -5.027593554738141 23.747682897460646 0.9535881205159685 1.0689127370484928 0.47131667426503243 0.054161655361742125 338.0281585803532 290915.82364921644 0.015795818582472743 0.027468793107917392 9.384398582980228e-06 5.027593554738141 0.11532461653252424 GPSPLVTMTPAVPAVTPVDEES(ph)S(ph)DGEPDQEAVQR ddPTM_KYSE-520_SHP099_60min_R1 1 GPSPLVTMTPAVPAVTPVDEESSDGEPDQEAVQR 34 0 H0Y4E8;Q9Y2K2-8;H7C3X8 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 2 GPSPLVTMT(0.001)PAVPAVT(0.048)PVDEES(0.976)S(0.976)DGEPDQEAVQR 56.983999999999995 0.032507999999999995 57472000.0 57351.0 60203.0 58946.0 55414.0 56663.0 60294.0 54234.0 52097.0 72044.0 63181.0 True False 54169.625703615944 57310.757513454715 62745.753476934646 60680.52989917336 61122.055731631575 59917.68278107628 59716.501992833015 51916.287666531236 58962.62568144679 62621.26549407423 0.8650356276933104 0.9151964122934877 1.0019879506087623 0.9690083619424057 0.9760590950915146 0.9568264439936336 0.953613784737134 0.8290520361879945 0.941575121745605 1.0 15.934365043305133 -9.667431284740479 13.950409854082402 0.9999993148386851 0.9360826057489678 0.13498397774748871 0.049732288691431446 0.0 0.0 0.05140261768233089 0.012466966008087787 2.1506449333390074e-10 9.667431284740479 -0.06391670908971725 GPSPLVTMTPAVPAVTPVDEES(ph)SDGEPDQEAVQR ddPTM_KYSE-520_SHP099_60min_R1 4 GPSPLVTMTPAVPAVTPVDEESSDGEPDQEAVQR 34 0 H0Y4E8;Q9Y2K2-8;H7C3X8 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 GPSPLVTMTPAVPAVT(0.112)PVDEES(0.444)S(0.444)DGEPDQEAVQR;GPSPLVTMTPAVPAVT(0.002)PVDEES(0.575)S(0.423)DGEPDQEAVQR;GPSPLVTMTPAVPAVT(0.003)PVDEES(0.568)S(0.428)DGEPDQEAVQR;GPSPLVTMTPAVPAVT(0.005)PVDEES(0.568)S(0.426)DGEPDQEAVQR 159.75 3.6638999999999996e-10 427269000.0 322626.0 392718.0 293051.0 242857.0 292848.0 414571.0 250237.0 325781.0 407977.0 376145.0 True False 304729.29264101357 373851.2377982643 311941.5363581784 265938.05626238044 315893.4715228076 411983.5086116961 275533.3980377722 324650.9417488566 333898.6610632332 372812.6479363816 0.8173791697459093 1.002785822497256 0.8367246607239825 0.7133289541929954 0.8473249855426394 1.1050684865230185 0.7390666587169824 0.870815256794229 0.8956205292697343 1.0 18.508091279722912 -6.0535412574583995 24.99989880374792 0.9107770731156261 0.844425136953409 0.10978714047666593 0.10957924787017025 944.3591657306813 440945.13053204597 0.0372436047872276 0.03724381859629668 8.840131850119212e-07 6.0535412574583995 -0.06635193616221702 GPSPRPPAT(ph)AYDAPASAFGSSLLGSGGSAFAPPLR ddPTM_KYSE-520_SHP099_60min_R1 1 GPSPRPPATAYDAPASAFGSSLLGSGGSAFAPPLR 35 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 GPS(0.208)PRPPAT(0.429)AY(0.357)DAPAS(0.006)AFGSSLLGSGGSAFAPPLR 97.10600000000001 3.1345e-05 38994000.0 28820.0 34660.0 30814.0 24058.0 28144.0 29898.0 24207.0 27166.0 32539.0 27135.0 True False 27221.29714875435 32994.881574279345 32800.319744143206 26344.465086698547 30358.772682544863 29711.39549190002 26654.079797553357 27071.767486592056 26630.737841438502 26894.60501071056 1.012147125340331 1.2268215711344115 1.2195873384673523 0.9795445992312242 1.128805300187704 1.104734406029302 0.9910567486281574 1.0065872867740926 0.9901888438529968 1.0 14.715029180402023 -6.511303649062301 0.8215756912234053 0.9853066641926759 1.1371568349924106 0.34018525799703037 0.07467848227778748 0.7120116616349829 0.9986724256289851 0.056009117619491545 0.04154867137797604 3.0810330070998817e-07 6.511303649062301 0.15185017079973473 GPSPS(ph)PVGSPASVAQSR ddPTM_KYSE-520_SHP099_60min_R1 1 GPSPSPVGSPASVAQSR 17 0 O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 GPS(0.099)PS(0.901)PVGSPASVAQSR 208.59 7.110599999999998e-18 894290000.0 168870.0 204070.0 155500.0 141010.0 181720.0 191380.0 156240.0 173990.0 224150.0 189890.0 True False 159502.44446600103 194266.1708846852 165523.77880879698 154411.54800379756 196020.33015463536 190185.52643119328 172034.2639554563 173386.4692995712 183450.01036167174 188207.72233218455 0.8474808710796732 1.0321902230016236 0.8794738959576236 0.8204315215677648 1.0415105593205238 1.0105086235277738 0.9140659151690796 0.9212505584311041 0.9747209524053667 1.0 17.52196629879328 -5.768300524667582 24.999933387528205 0.9715997308111958 0.9035995461602678 0.2806786850420727 0.06344035078573665 272.43586982704375 992671.4925040132 0.020471402781411303 0.02372065967454831 1.7049022163133346e-06 5.768300524667582 -0.06800018465092794 GPSPT(ph)PEDVSMKEENLCQAFSDALLCK ddPTM_KYSE-520_SHP099_60min_R1 1 GPSPTPEDVSMKEENLCQAFSDALLCK 27 1 H1UBN3;O95067 H1UBN3 CCNB2V;CCNB2 G2/mitotic-specific cyclin-B2 1 GPS(0.464)PT(0.52)PEDVS(0.015)MKEENLCQAFSDALLCK 75.758 0.050982 290170000.0 43875.0 46460.0 35087.0 28913.0 30681.0 32164.0 31073.0 38075.0 47408.0 38430.0 True False 41441.1662873559 44227.99186211824 37348.76416118494 31660.882826989586 33095.42014898946 31963.252545370004 34214.162083255884 37942.92671177182 38799.90225842576 38089.54009808756 1.0879933488468827 1.1611584636680579 0.9805517227303091 0.831222502174009 0.8688847401087721 0.8391608946461092 0.8982561090301467 0.9961508228784548 1.0186497962041257 1.0 15.217107248122428 -4.907174712494402 4.552294700955473 0.9142766170136352 1.1223703714575246 0.5959908104308417 0.06551583564786827 0.1415898122706384 5.152768294955835 0.018903087646912925 0.04163035742467018 1.2382983308028918e-05 4.907174712494402 0.20809375444388944 GPSQEEEDNHS(ph)DEEDR ddPTM_KYSE-520_SHP099_60min_R1 4 GPSQEEEDNHSDEEDR 16 0 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPSQEEEDNHS(1)DEEDR;GPSQEEEDNHS(1)DEEDR;GPSQEEEDNHS(1)DEEDR;GPSQEEEDNHS(1)DEEDR 196.1 1.6403e-12 1081900000.0 790810.0 723649.0 677192.0 642723.0 668639.0 710712.0 705690.0 675180.0 810890.0 673577.0 True False 746942.1928593493 688883.8158207056 720844.8798655099 703807.2006782837 721257.0852645015 706276.1827827703 777028.0320706991 672837.9581681961 663652.8168734146 667609.6318149756 1.1188307616663629 1.0318662029304364 1.079740083895746 1.0542196624169438 1.0803575186650303 1.0579179046034357 1.163895778373144 1.007831412406389 0.9940731607918777 1.0 19.3486452435044 -7.487620681718994 24.967289036774286 0.9983417762248376 1.0798683075144229 0.5462700627408559 0.03470416469664129 418.2846819656347 296201.1029874191 0.018326602635893557 0.008797646331134631 3.253713567658254e-08 7.487620681718994 0.08152653128958531 GPSQEEEDNHS(ph)DEEDRASEPK ddPTM_KYSE-520_SHP099_60min_R1 4 GPSQEEEDNHSDEEDRASEPK 21 1 E7ERS3;Q86VM9;H3BPD0 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPSQEEEDNHS(1)DEEDRASEPK;GPSQEEEDNHS(1)DEEDRASEPK;GPSQEEEDNHS(1)DEEDRASEPK;GPSQEEEDNHS(1)DEEDRASEPK 242.94 9.709799999999998e-27 2022820000.0 1224122.0 1133091.0 1137988.0 1085329.0 1187157.0 1047208.0 1087418.0 1108371.0 1397810.0 1091149.0 True False 1156217.5124332926 1078655.6075557335 1211344.5273251778 1188478.3418439375 1280579.501900651 1040671.9864299159 1197344.8236169654 1104526.3196967365 1144002.9399225898 1081482.2687610753 1.0691044558297127 0.9973863083223916 1.1200780283830913 1.098934653089999 1.1840966226544403 0.9622644924378548 1.1071331062955105 1.0213078398058806 1.0578101675519256 1.0 20.044578581383043 -6.274986605372139 24.991660761688458 1.035874245190917 1.090288850717572 0.24299800950010242 0.05596271780442465 1445.820719327225 2667213.428664751 0.01998767401871937 0.01772996660856414 5.309008181650922e-07 6.274986605372139 0.054414605526655 GPSS(ph)VEDIK ddPTM_KYSE-520_SHP099_60min_R1 4 GPSSVEDIK 9 0 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 1 GPS(0.076)S(0.924)VEDIK;GPS(0.025)S(0.975)VEDIK;GPS(0.02)S(0.98)VEDIK;GPS(0.047)S(0.953)VEDIK 145.28 0.0003455 17318000000.0 26389600.0 24173300.0 22057700.0 19875800.0 20818900.0 22282800.0 20932000.0 21881100.0 26014500.0 21336400.0 True False 24925716.281636603 23011978.383136973 23479574.635567844 21764790.05612283 22457228.986662626 22143724.779815 23048010.836633462 21805199.571187124 21290922.572178055 21147376.095468033 1.1786670917995488 1.0881718034072574 1.1102831164287852 1.0291957715164062 1.0619392630689204 1.0471145299468376 1.0898756768965179 1.0311066239494395 1.0067879095762042 1.0 24.33397533328287 -1.0000000000000002 0.38196496235666855 1.0286664925918816 3.038713893592373 0.7315747625670509 0.026668399974505874 37.53739091520322 0.5120095272169842 0.020467495718459135 55.93223773717461 0.09999999999999995 1.0000000000000002 2.0100474010004916 GPSSVEDIK ddPTM_KYSE-520_SHP099_60min_R1 1 GPSSVEDIK 9 0 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 0 94.309 0.026038 378310000.0 633480.0 774340.0 735590.0 549440.0 745650.0 834530.0 619310.0 713560.0 816280.0 561600.0 False True 598339.6015889281 737139.5440919648 783007.308385614 601658.6124048403 804328.4128318501 829321.3887168148 681915.8986831394 711084.8269061553 668064.1287442584 556624.660918188 1.07494267430036 1.3243027049430507 1.4067061044223108 1.0809054191245602 1.4450103800738165 1.4899113297438098 1.2250910650603863 1.277494291634825 1.2002057681782259 1.0 19.086345302251548 -9.820437327127026 8.473971655559431 1.0000000052335618 1.2889154735706354 0.2793812290260306 0.13454285370215086 0.0 0.0 0.1304032263740566 0.03162742801538625 1.5120378852345255e-10 9.820437327127026 0.2889154683370736 GPSWDPFR ddPTM_KYSE-520_SHP099_60min_R1 2 GPSWDPFR 8 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 0 ; 89.75200000000001 0.033697000000000005 1828830000.0 6262800.0 5664900.0 3710300.0 3253800.0 6054900.0 6678400.0 4933900.0 4361900.0 3821800.0 5307800.0 False True 5915389.9994177185 5392749.700811746 3949471.8746898957 3563040.173709358 6531386.182331618 6636717.6283733025 5432666.762223672 4346769.586975114 3127857.45973784 5260777.021405908 1.1244327549615227 1.0250861572100176 0.7507392650590663 0.6772840132192409 1.2415249982570347 1.2615470302901535 1.0326738312835444 0.8262599933979845 0.5945618768882815 1.0 22.326844471909848 -7.34124258458839 4.841586085206371 0.774057944183696 1.0112237703451752 0.1870042091318984 0.19817276572585482 0.39561984418401774 16.597876851102125 0.1242204247506891 0.05749275107430122 4.557822577845302e-08 7.34124258458839 0.2371658261614792 GPSWDPFRDWYPHSR ddPTM_KYSE-520_SHP099_60min_R1 2 GPSWDPFRDWYPHSR 15 1 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 0 ; 116.78 0.00015142 773850000.0 640600.0 698290.0 665470.0 356898.0 655340.0 566155.0 402792.0 330163.0 436418.0 314624.0 False True 605064.6409955593 664743.1002453413 708367.2609896461 390817.4786147031 706911.5296254603 562621.416640466 443510.1462310947 329017.74161362334 357175.4924024984 311836.67613376805 1.9403254565733177 2.1317027505776376 2.2715970096018436 1.2532761811732973 2.2669287602405612 1.8042182324927014 1.4222513904709622 1.0550963590712632 1.1453928281652201 1.0 18.250431092544925 -6.893864886386146 2.1084172327484203 1.0693893562153025 1.96609663312936 0.6841604598843415 0.27203247367767897 0.19080108785093688 1.714631501733672 0.14608796622658526 0.08476291782392884 1.2768359842257726e-07 6.893864886386146 0.8967072769140574 GPTSS(ph)PCEEEGDEGEEDR ddPTM_KYSE-520_SHP099_60min_R1 1 GPTSSPCEEEGDEGEEDR 18 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 GPTS(0.001)S(0.999)PCEEEGDEGEEDR 257.46 2.9883000000000006e-25 0.0 228390.0 203470.0 195950.0 200150.0 197830.0 209340.0 203790.0 212350.0 225930.0 216280.0 True False 215720.75141582254 193694.99578530353 208581.25053108548 219172.19582270813 213398.0955012737 208033.4314092699 224391.08199873587 211613.40741286243 184906.8072318203 214363.92746329366 1.0063295348643078 0.90358017823904 0.9730240204094116 1.0224303986977372 0.9954944286874696 0.9704684639391683 1.0467763147190854 0.9871689230413909 0.8625835951969232 1.0 17.709702628141624 -3.9314082656334706 21.260563740771673 0.9761720938877758 1.8727317605917206 0.033167690616693224 0.051382111442647566 3171.8944339310574 1002853.3050644383 0.012539346589201698 2695.262731714993 0.00011710939419025148 3.9314082656334706 0.8965596667039448 GPTSTSIDNIDGT(ph)PVRDER ddPTM_KYSE-520_SHP099_60min_R1 1 GPTSTSIDNIDGTPVRDER 19 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 GPTSTSIDNIDGT(1)PVRDER 139.04 8.7436e-06 891910000.0 348570.0 354250.0 288690.0 277290.0 319850.0 364890.0 292790.0 303410.0 398740.0 331020.0 True False 329234.1272429323 337231.2982599092 307299.41932033165 303643.5582297217 345020.3753024435 362612.58616092725 322388.0705550313 302357.54152642615 326338.8674174128 328087.4203296628 1.0034951261225356 1.0278702484876092 0.9366388355016986 0.9254958874211638 1.051611107051183 1.1052316050294568 0.9826285635428973 0.9215761494988646 0.9946704664552727 1.0 18.323720752913875 -6.993713454127247 24.998721910016975 0.9652944394962877 1.0075210206889607 0.08780425916997459 0.05258584918142423 390.59522981486145 1553214.1241591265 0.02429759762526838 0.016332334093010315 1.0145805814140743e-07 6.993713454127247 0.042226581192672974 GPTTGEGALDLSDVHS(ph)PPKS(ph)PEGK ddPTM_KYSE-520_SHP099_60min_R1 5 GPTTGEGALDLSDVHSPPKSPEGK 24 1 O95684;O95684-2 O95684 FGFR1OP FGFR1 oncogene partner 2 GPTTGEGALDLS(0.228)DVHS(0.773)PPKS(0.999)PEGK;GPTTGEGALDLS(0.001)DVHS(0.999)PPKS(1)PEGK;GPTTGEGALDLSDVHS(1)PPKS(1)PEGK;GPTTGEGALDLSDVHS(1)PPKS(1)PEGK;GPTTGEGALDLS(0.001)DVHS(0.999)PPKS(1)PEGK 197.01 3.5510999999999997e-15 4730950000.0 3265880.0 3325980.0 3039640.0 4535580.0 3431410.0 3258910.0 3342610.0 3276700.0 3924760.0 3248440.0 True False 3084715.1260296274 3166194.9284022423 3235580.0579959606 4966640.159528149 3701442.4449478113 3238569.9338587113 3680513.6395298834 3265333.8924875283 3212122.5191482273 3219661.348848074 0.958086827092319 0.9833937751046515 1.0049442184823512 1.542597068882759 1.1496371959343203 1.005872849024138 1.1431368832770852 1.014185511670597 0.997658502282377 1.0 21.61847751976623 -7.318845958655236 5.972691214109318 1.0025272037150783 1.1172520609075252 0.0893427431904471 0.1584418612721987 0.6426860034986888 49.54405825278428 0.09554268501531256 0.045365209170528255 4.7990363705926445e-08 7.318845958655236 0.11472485719244685 GPTTGEGALDLSDVHS(ph)PPKSPEGK ddPTM_KYSE-520_SHP099_60min_R1 1 GPTTGEGALDLSDVHSPPKSPEGK 24 1 O95684;O95684-2 O95684 FGFR1OP FGFR1 oncogene partner 1 GPTTGEGALDLSDVHS(0.731)PPKS(0.269)PEGK 244.74 9.027299999999999e-29 575230000.0 328900.0 358470.0 327170.0 424750.0 328180.0 356130.0 349740.0 355950.0 430390.0 407830.0 True False 310655.26135410485 341248.56312556035 348259.90169050876 465118.1122942563 354005.89891122724 353907.260570284 385095.1323334703 354715.29252935457 352242.02524898486 404216.94348693854 0.7685359714866654 0.8442213237817605 0.861566807878656 1.1506645621580325 0.87578193990937 0.8755379166378754 0.9526941869667417 0.8775369223007755 0.8714182592407012 1.0 18.6247702706034 -4.849164624685837 3.3517991980593407 0.936641075051803 0.8010199041036989 0.29990829678331776 0.08341137570261845 0.30710660915029286 6.744156916313483 0.022901036284599555 0.05714092699449674 1.415257207546831e-05 4.849164624685837 -0.1356211709481041 GPTTGEGALDLSDVHSPPKS(ph)PEGK ddPTM_KYSE-520_SHP099_60min_R1 1 GPTTGEGALDLSDVHSPPKSPEGK 24 1 O95684;O95684-2 O95684 FGFR1OP FGFR1 oncogene partner 1 GPTTGEGALDLSDVHS(0.004)PPKS(0.996)PEGK 246.4 7.7896e-29 674010000.0 702180.0 765990.0 683190.0 825610.0 698330.0 710210.0 676180.0 626460.0 828780.0 661350.0 True False 663228.6756388732 729190.69062557 727229.5205426489 904075.7261713024 753284.5980458208 705777.3159509765 744534.8732808529 624286.9564768631 678294.4438436147 655490.9535225139 1.0118044682001757 1.112434407686337 1.1094424974663988 1.3792344826620868 1.1491914480249927 1.0767155704563593 1.1358430948281282 0.9523959913131296 1.0347884134762777 1.0 19.32221634428389 -7.246190326027329 20.40137091057762 0.9951942247081995 1.144269987623836 0.34147255099974705 0.09113901890131124 81.83268956585637 109483.46251804895 0.046191238659408065 0.026429331442752273 5.672959380896664e-08 7.246190326027329 0.1490757629156365 GPVS(ph)PSVSFQPLAR ddPTM_KYSE-520_SHP099_60min_R1 1 GPVSPSVSFQPLAR 14 0 Q7Z434-4;Q7Z434 Q7Z434-4 MAVS Mitochondrial antiviral-signaling protein 1 GPVS(0.894)PS(0.105)VSFQPLAR 107.97 0.0010763 0.0 533510.0 531170.0 439630.0 366320.0 460540.0 450960.0 378070.0 490820.0 655900.0 461270.0 True False 503915.13677418284 505651.7958975756 467969.25323287066 401134.9426618761 496781.877885845 448145.39136488165 416289.0052076259 489117.4599782494 536805.0938934672 457183.5066626301 1.10221635170675 1.106014955764167 1.023591722826956 0.8774046675263943 1.0866137352860277 0.9802308806725655 0.9105512319253863 1.0698493118195191 1.1741567359069065 1.0 18.802413832308456 -10.064014169954476 6.44694804944827 0.9999999715657136 1.0307689790036776 0.011545011021630747 0.08749352734255054 3.7264408100699055e-08 5.306886329715663e-09 0.08830800918217568 0.02141781841537568 8.629503913713533e-11 10.064014169954476 0.030769007437963958 GPVTDVAYSHDGAFLAVCDASK ddPTM_KYSE-520_SHP099_60min_R1 2 GPVTDVAYSHDGAFLAVCDASK 22 0 O75083;O75083-3 O75083 WDR1 WD repeat-containing protein 1 0 ; 167.16 2.5468000000000003e-09 1413940000.0 1558990.0 1436030.0 981660.0 1783890.0 1173450.0 864760.0 1173290.0 1169380.0 1029950.0 894970.0 False True 1472509.7169304825 1367040.9632750268 1044939.3743115342 1953430.369253914 1265793.838982812 859362.7120735651 1291897.603406922 1165323.693715344 842937.0429266288 887041.2620761247 1.660023924348306 1.5411244343644852 1.1780053747058488 2.2021865867681285 1.4269841698459607 0.9687967728380777 1.4564120730790233 1.3137198274045312 0.9502794052147364 1.0 19.758641689682484 -6.003366841120052 24.987100930617956 1.1796409130243826 1.6307700748880238 0.4256297085376881 0.2764628497685203 151.63586860558948 1125382.2649005689 0.08639084083365096 0.0960213689864447 9.922775344716022e-07 6.003366841120052 0.45112916186364127 GQAGASRPHAPGT(ph)PAGR ddPTM_KYSE-520_SHP099_60min_R1 3 GQAGASRPHAPGTPAGR 17 1 Q8TDD1-2 Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 GQAGASRPHAPGT(1)PAGR;GQAGASRPHAPGT(1)PAGR;GQAGASRPHAPGT(1)PAGR 110.67 0.00044551 459639000.0 402459.0 471250.0 435067.0 489761.0 449699.0 398910.0 383161.0 401649.0 463867.0 470155.0 True False 380133.7969878739 448610.4426393292 463112.114951812 536307.7381879867 485087.7528626972 396420.2547218483 421894.65317099704 400255.7733645816 379640.4459354792 465989.79247505474 0.8157556305446823 0.9627044409204395 0.9938245910753576 1.1509001846144433 1.0409836453416836 0.8507058762302596 0.905373164785754 0.8589367832257999 0.8146969141084823 1.0 18.829938827370214 -6.265275908527806 24.94835105007014 0.8783405074671449 0.999996372782062 0.25807940168579546 0.0897484445808107 446.29377092139174 2902167.5236968035 0.03279258570484638 0.0300206845214413 5.429053126087726e-07 6.265275908527806 0.12165586531491712 GQES(ph)FKK ddPTM_KYSE-520_SHP099_60min_R1 6 GQESFKK 7 1 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 1 GQES(1)FKK;GQES(1)FKK;GQES(1)FKK;GQES(1)FKK;GQES(1)FKK;GQES(1)FKK 91.584 0.0054855 13002400000.0 35681300.0 31476700.0 29539000.0 30505700.0 30311100.0 27926900.0 32209400.0 30201900.0 35305100.0 30815200.0 True False 33701987.16009192 29964512.0845101 31443131.204071105 33404952.556126844 32696411.123432513 27752597.858142406 35465440.48545106 30097136.658076454 28894583.80914504 30542201.30186284 1.1034563889812474 0.9810855408998465 1.0294978706120084 1.0937310060257313 1.070532238337329 0.9086639690391181 1.16119464130727 0.9854278793009186 0.9460543961309918 1.0 24.864300711049363 -7.498539096593255 24.96728923333968 0.9705984600439964 1.045522076246065 0.19934651855579577 0.06655222115410944 1120.2068510819054 1149099.2839648405 0.03529252185976689 0.01681305512850327 3.1729330132913775e-08 7.498539096593255 0.07492361620206867 GQES(ph)PLKK ddPTM_KYSE-520_SHP099_60min_R1 9 GQESPLKK 8 1 A0A3B3ITL0;Q9Y2H2;A0A3B3IRJ9;Q9Y2H2-4 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 GQES(1)PLKK;GQES(1)PLKK;GQES(1)PLKK;GQES(1)PLKK;GQES(1)PLKK;GQES(1)PLKK;GQES(1)PLKK;GQES(1)PLKK;GQES(1)PLKK 122.33 0.00059849 13330950000.0 13497340.0 11634800.0 11183230.0 11154060.0 12054540.0 11546380.0 11345010.0 11862030.0 13865090.0 11384890.0 True False 12748615.643919762 11075846.74380916 11904118.899600642 12214138.508809566 13003163.7170496 11474314.759507807 12491874.32742762 11820883.386548616 11347539.166475622 11284028.731910389 1.1297929087921967 0.9815507392751929 1.054952905777055 1.0824271010821602 1.1523511704891025 1.01686330583857 1.1070402800465702 1.0475765054656447 1.0056283474700511 1.0 23.427778908708476 -7.660465345993771 3.4250855461127974 1.0011559478125343 1.0719919993522813 0.2629553553001426 0.04766031770771542 0.34426295859581674 7.462403484819281 0.039336570926950386 0.01236243176017923 2.1854186955544047e-08 7.660465345993771 0.07083605153974704 GQESFK ddPTM_KYSE-520_SHP099_60min_R1 3 GQESFK 6 0 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 0 ;; 120.65 0.06129299999999999 3058760000.0 3002740.0 3007770.0 1847500.0 2090840.0 3166640.0 3415500.0 2559110.0 2665630.0 2624970.0 3060290.0 False True 2836172.026386212 2863272.2144451845 1966592.8061045152 2289552.804966033 3415836.552283039 3394182.597584608 2817809.8133067614 2656383.5516927177 2148341.6181087554 3033178.211469596 0.9350495845122359 0.9439841693501778 0.6483604552703441 0.754836229638063 1.1261575529477519 1.1190185214801813 0.9289957980878127 0.8757756275737196 0.7082807103074464 1.0 21.532398833936536 GQFSTDELVAEVEKR ddPTM_KYSE-520_SHP099_60min_R1 3 GQFSTDELVAEVEKR 15 1 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 ;; 161.32 1.3065e-07 2074690000.0 1698550.0 1554250.0 998880.0 1086960.0 1429290.0 1517540.0 1124050.0 1173950.0 1284070.0 1210110.0 False True 1604328.045524521 1479581.4970231869 1063269.4030645092 1190264.3515935603 1541766.9914523372 1508068.4699571182 1237679.9436708314 1169877.8414519895 1050915.2567705202 1199389.3668513333 1.3376207008873546 1.2336123179976333 0.8865089456777746 0.9923919491784989 1.2854599465891732 1.25736354818297 1.0319250594325506 0.9753945414100025 0.8762085823133559 1.0 20.193868657129745 -6.987561385466648 4.559191651330085 0.9522136401966979 1.1538159107216002 0.3509939509068367 0.13221569487221155 0.2630319246197708 13.90618664572054 0.0668288975651357 0.04166330880222016 1.0290550648583244e-07 6.987561385466648 0.20160227052490232 GQGASRPHAPGT(ph)PAGR ddPTM_KYSE-520_SHP099_60min_R1 1 GQGASRPHAPGTPAGR 16 1 Q8TDD1 Q8TDD1 DDX54 ATP-dependent RNA helicase DDX54 1 GQGAS(0.004)RPHAPGT(0.996)PAGR 63.998000000000005 0.047994 0.0 64839.0 72064.0 65587.0 70475.0 58615.0 48581.0 52096.0 55794.0 77336.0 55217.0 True False 61242.25141665796 68601.93726973065 69814.84296291036 77172.92281091862 63227.667026270894 48277.787958793066 57362.37208796379 55600.46363641751 63293.7318819105 54727.82033817596 1.1190332638542484 1.25351122785127 1.2756737347021712 1.4101223533853375 1.1553112591653094 0.8821434447868262 1.0481391682239183 1.0159451498862788 1.1565184122225913 1.0 15.739986778577515 -6.003006831331883 24.919097753837892 1.0227654084635984 1.2668525422876935 0.6198862881390863 0.0902804475355072 79.05464117230774 655173.3987544746 0.028644202513445568 0.03187939504379439 9.931004271034848e-07 6.003006831331883 0.24408713382409508 GQGESDPLDHEPAVS(ph)PLLPR ddPTM_KYSE-520_SHP099_60min_R1 3 GQGESDPLDHEPAVSPLLPR 20 0 P00519-2;P00519 P00519-2 ABL1 Tyrosine-protein kinase ABL1 1 GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR;GQGESDPLDHEPAVS(1)PLLPR 182.35 2.2805000000000003e-10 650700000.0 514470.0 713860.0 660230.0 706160.0 445980.0 581520.0 377903.0 417320.0 648010.0 550930.0 True False 485931.3235294809 679565.094074295 702789.4822053512 773273.2340852536 481076.088720913 577890.5179761087 416105.1232178623 415872.41432322067 530347.719002752 546049.1888170538 0.8899039381089264 1.2445125970180204 1.2870442747618678 1.416123766725946 0.8810123677009817 1.0583121993607116 0.7620286445609437 0.7616024761874575 0.9712453197699698 1.0 19.058671391270675 -5.78415325960444 24.976179510400385 0.8942271967271689 1.2174507511982828 0.4874847181670582 0.15218985760185882 193.626979947582 212911.1320369167 0.048682344363611844 0.05523802218532404 1.6437915378608736e-06 5.78415325960444 0.32322355447111395 GQGPRS(ph)PHK ddPTM_KYSE-520_SHP099_60min_R1 4 GQGPRSPHK 9 1 Q86U38-2;Q86U38 Q86U38-2 NOP9 Nucleolar protein 9 1 GQGPRS(1)PHK;GQGPRS(1)PHK;GQGPRS(1)PHK;GQGPRS(1)PHK 62.466 0.020791 7256920000.0 1246620.0 1307760.0 919134.0 994500.0 1414560.0 1754950.0 1030164.0 893700.0 1394870.0 3113830.0 True False 1177467.5035246394 1244933.2466122205 978382.8483063969 1089016.980992672 1525877.8242545717 1743996.7060843494 1134303.0305517726 890599.9632911481 1141596.769811221 3086243.8887230847 0.38152121024103824 0.40338135659372804 0.31701410633208155 0.35286160791500065 0.4944125867142323 0.565087131466437 0.36753512406988803 0.28857083088777813 0.36989843025126246 1.0 21.557420643918597 -10.193500045452437 5.378136803154471 1.0000278429363691 0.3944032337610292 0.8474494017896134 0.07721339182236714 2.8749215886138253e-05 4.3112724731878415e-06 0.0833800837715501 0.02022171357941169 6.404717145387836e-11 10.193500045452437 -0.6056246091753399 GQGS(ph)SPVAMQK ddPTM_KYSE-520_SHP099_60min_R1 1 GQGSSPVAMQK 11 0 P18206-2;P18206 P18206-2 VCL Vinculin 1 GQGS(0.885)S(0.115)PVAMQK 109.6 0.0020593000000000005 618540000.0 4687000.0 4415100.0 3811300.0 3526000.0 3808800.0 4580600.0 3802800.0 4760200.0 5387400.0 4697000.0 True False 4427002.766697138 4202991.968799792 4056982.4962956132 3861109.9798694393 4108530.890892444 4552010.776312706 4187224.1357514705 4743687.9772390295 4409183.965302119 4655388.234210707 0.9509416925026252 0.9028230852828935 0.8714595415442188 0.8293851738283793 0.8825323870306642 0.9777940200264461 0.8994360781730568 1.0189672135998111 0.9471141274320958 1.0 22.15047005509214 -6.649007853009748 1.3083943654544838 0.9813664428522213 0.8859730313632902 0.4596839141678968 0.04239779451218853 0.41283690107949733 1.4384623017542975 0.025792701520497608 0.016557243286475638 2.2438413497758626e-07 6.649007853009748 -0.0953934114889311 GQGSS(ph)PVAMQK ddPTM_KYSE-520_SHP099_60min_R1 3 GQGSSPVAMQK 11 0 P18206-2;P18206 P18206-2 VCL Vinculin 1 GQGS(0.201)S(0.799)PVAMQK;GQGS(0.134)S(0.866)PVAMQK;GQGS(0.005)S(0.995)PVAMQK 157.43 2.7666e-05 1058540000.0 5061130.0 4781710.0 4050900.0 3696260.0 4077820.0 4959890.0 4065770.0 4936270.0 5741080.0 4710320.0 True False 4780379.029787475 4551989.474106963 4312027.495669171 4047551.4390789103 4398721.234378021 4928933.48673222 4476777.709691347 4919147.231504085 4698644.592849377 4668590.229373506 1.0239448730605278 0.9750244186065157 0.923625181010546 0.8669750910270111 0.9421947565032497 1.055764855034975 0.9589142524277827 1.0536686643762696 1.006437567231062 1.0 22.154555535502436 -6.237757573010917 23.400998107619024 1.0148086789775506 0.9422731806384638 0.36458659962271045 0.04512375515515193 399.638573155707 394899.32764707407 0.015725281596655316 0.01571323961999164 5.784188357732443e-07 6.237757573010917 -0.07253549833908679 GQHFYAVER ddPTM_KYSE-520_SHP099_60min_R1 2 GQHFYAVER 9 0 Q15654;H7BZE2 Q15654 TRIP6 Thyroid receptor-interacting protein 6 0 ; 72.006 0.017272 506860000.0 400700.0 398720.0 322364.0 308559.0 396979.0 353980.0 305532.0 374652.0 346963.0 366657.0 False True 378472.3722243533 379564.8927090785 343144.09924063704 337884.3545883543 428218.98879846424 351770.679517786 336418.1562649677 373352.4196564344 283963.2654254593 363408.70423482935 1.0414510379470439 1.0444573514227367 0.944237425361453 0.9297640663279721 1.1783399346476728 0.9679753825887367 0.9257294950414265 1.027362347972765 0.7813881784239445 1.0 18.4712334493364 -6.512204037513838 24.704220917374343 0.937464784159328 1.0239761760925246 0.20616139931752875 0.08733673818051538 790.5109344884644 1829468.9292348311 0.03170221623050705 0.026229446586536462 3.074651961630914e-07 6.512204037513838 0.08651139193319657 GQHPNPLR ddPTM_KYSE-520_SHP099_60min_R1 1 GQHPNPLR 8 0 M0QZT2;M0R389;M0R1K3;Q15102 M0QZT2 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma 0 84.568 0.0097318 290830000.0 369760.0 369620.0 309350.0 248140.0 350730.0 400730.0 279630.0 305750.0 327950.0 331630.0 False True 349248.67570171435 351862.90038906876 329291.19597750064 271723.1509939889 378330.45561927813 398228.8954267537 307897.72932580847 304689.42461258615 268402.5469467336 328692.01620423555 1.0625407934603004 1.0704942105147932 1.001822921591417 0.826680106599095 1.1510180867435469 1.2115563378311898 0.9367362580978956 0.926975434728128 0.8165776280369385 1.0 18.32637688880319 -6.97546785342265 24.99614672091923 0.9094369895619874 1.0487769174502826 0.2889533991974236 0.10308989744798748 308.55626734288006 314391.61606768786 0.04607000619356841 0.031058999054247808 1.0581132348824014e-07 6.97546785342265 0.1393399278882952 GQKPALDCSQVS(ph)PPRPAT(ph)SPENNASLSDTSPMDSSPSGIPK ddPTM_KYSE-520_SHP099_60min_R1 2 GQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK 41 2 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 2 GQKPALDCS(0.236)QVS(0.764)PPRPAT(0.526)S(0.464)PENNAS(0.008)LS(0.001)DTSPMDSSPSGIPK;GQKPALDCS(0.007)QVS(0.992)PPRPAT(0.535)S(0.465)PENNAS(0.001)LSDTSPMDSSPSGIPK 199.5 1.8141999999999998e-15 4127500000.0 1409570.0 1298010.0 1210970.0 1344090.0 1302130.0 1281080.0 1245850.0 1273610.0 1421480.0 1211110.0 True False 1331378.3421918706 1235651.6512472688 1289031.0638205053 1471831.9094846044 1404600.2228937647 1273084.3045275037 1371792.6763242807 1269192.14417281 1163375.0645947314 1200380.5076293212 1.1091302580556412 1.0293833025392973 1.073852045770273 1.2261377955823218 1.1701291498541284 1.060567292151193 1.1427981940772165 1.0573248533328716 0.9691719060752884 1.0 20.19506036636965 -7.55447628580161 3.6635734043232757 0.9862443358422425 1.1149511473044065 0.4876748526914215 0.05370558078636593 0.21681768064611748 6.1173429873812575 0.04384586949772101 0.015480495698938461 2.7894829689971444e-08 7.55447628580161 0.128706811462164 GQKPALDCSQVS(ph)PPRPATS(ph)PENNASLSDTSPMDSSPSGIPK ddPTM_KYSE-520_SHP099_60min_R1 1 GQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK 41 2 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 2 GQKPALDCS(0.162)QVS(0.61)PPRPAT(0.293)S(0.604)PENNAS(0.092)LS(0.039)DT(0.078)S(0.085)PMDS(0.017)S(0.019)PS(0.001)GIPK 54.681000000000004 0.024457 240460000.0 148560.0 141030.0 140320.0 125320.0 127430.0 133880.0 131650.0 122750.0 153090.0 139320.0 True False 140319.08065298217 134254.70710965432 149365.25171993798 137230.37512116804 137458.01602248044 133044.40525973542 144958.46678018352 122324.2089000653 125292.71508484632 138085.7331893199 1.0161736293249084 0.9722561774400464 1.081684894377564 0.9938056014303871 0.9954541490106089 0.9634913193916083 1.0497714965342646 0.8858569678038712 0.9073545267204836 1.0 17.07520474464635 -7.263269959974468 24.993175282992443 0.9224543099624518 1.0086386132955254 0.4130648557809661 0.042919651349021815 146.74608011834297 2003501.4573209342 0.02134000467084519 0.011077377126730618 5.4541872024925194e-08 7.263269959974468 0.08618430333307359 GQKPALDCSQVS(ph)PPRPATSPENNAS(ph)LSDTSPMDSSPSGIPK ddPTM_KYSE-520_SHP099_60min_R1 1 GQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK 41 2 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 2 GQKPALDCS(0.019)QVS(0.808)PPRPAT(0.28)S(0.28)PENNAS(0.332)LS(0.188)DT(0.044)S(0.044)PMDS(0.002)S(0.002)PSGIPK 50.468 0.030224 201560000.0 160560.0 156290.0 138740.0 131310.0 160220.0 157210.0 141750.0 157570.0 180540.0 123450.0 True False 151653.41673157533 148781.59380392745 147683.4023918488 143789.66292020888 172828.40247290148 156228.7940759116 156079.4733466842 157023.42644711438 147758.4870430347 122356.32904264673 1.2394407213599652 1.2159697415576298 1.206994387191646 1.1751714361264602 1.4125007167603316 1.2768345969374317 1.2756142209225925 1.2833290086071854 1.2076080428298415 1.0 16.90072920308977 -8.153039004769983 3.8445735624025312 1.0000216690046375 1.2603375165954598 0.6237477828320002 0.06061225652712555 0.6436380151013169 15.105866720272655 0.06204328792274948 0.016318932770492487 7.030091785273672e-09 8.153039004769983 0.26031584759082227 GQKPALDCSQVS(ph)PPRPATSPENNASLSDTSPMDS(ph)SPSGIPK ddPTM_KYSE-520_SHP099_60min_R1 1 GQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK 41 2 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 2 GQKPALDCS(0.005)QVS(0.993)PPRPAT(0.001)S(0.001)PENNASLSDTS(0.003)PMDS(0.532)S(0.462)PS(0.003)GIPK 134.67 4.1949e-07 1759700000.0 404990.0 395090.0 401820.0 364730.0 339950.0 444910.0 345220.0 334510.0 444890.0 381130.0 True False 382524.3973724501 376109.2833578198 427721.9601347314 399393.8295399268 366702.1309490878 442133.1516590155 380118.20662252064 333349.66288522066 364109.19076423935 377753.4847146534 1.0126296986019878 0.9956474223975045 1.1322779999179176 1.0572869495608228 0.9707445352253639 1.1704277248242807 1.0062599605392217 0.8824529127428847 0.9638804286326553 1.0 18.527085538516157 -7.0041575015584385 24.997526118899867 0.9427712766072549 1.056236982991619 0.37346953961530216 0.06250083282234696 172.26441880153254 1035763.9868204482 0.026356916391425393 0.01730111599089473 9.904726741964646e-08 7.0041575015584385 0.11346570638436404 GQKPALDCSQVS(ph)PPRPATSPENNASLSDTSPMDSS(ph)PSGIPK ddPTM_KYSE-520_SHP099_60min_R1 2 GQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK 41 2 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 2 GQKPALDCS(0.063)QVS(0.544)PPRPAT(0.179)S(0.203)PENNAS(0.009)LS(0.001)DTSPMDS(0.38)S(0.616)PS(0.003)GIPK;GQKPALDCS(0.039)QVS(0.961)PPRPATSPENNASLSDTSPMDS(0.21)S(0.788)PS(0.001)GIPK 148.85 1.7105e-07 3590400000.0 459990.0 409610.0 314920.0 336420.0 362580.0 380390.0 349450.0 359200.0 386700.0 342630.0 True False 434473.4377326692 389931.7207628551 335220.24708981585 368393.2556516391 391112.9832020008 378015.8449114942 384775.8163033429 357954.0190379102 316485.0279137116 339594.5647621065 1.279388667592567 1.148227213341918 0.9871189997538536 1.0848031561097178 1.1517056625331565 1.1131386781066495 1.133044683953899 1.0540628625451203 0.931949626859948 1.0 18.3734538430642 -4.406949205198746 3.399201049953934 1.067800959899247 1.2802328571566521 0.5116214234737411 0.06644862966290789 0.22995165835582884 4.383837650912066 0.017777736151558914 0.09893308325737339 3.9178769766346615e-05 4.406949205198746 0.21243189725740508 GQKPALDCSQVS(ph)PPRPATSPENNASLSDTSPMDSSPSGIPK ddPTM_KYSE-520_SHP099_60min_R1 5 GQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK 41 2 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 GQKPALDCS(0.206)QVS(0.747)PPRPAT(0.018)S(0.018)PENNAS(0.006)LS(0.002)DT(0.001)S(0.001)PMDSSPSGIPK;GQKPALDCS(0.022)QVS(0.96)PPRPAT(0.009)S(0.009)PENNAS(0.001)LSDTSPMDSSPSGIPK;GQKPALDCS(0.002)QVS(0.839)PPRPAT(0.08)S(0.08)PENNASLSDTSPMDSSPSGIPK;GQKPALDCS(0.023)QVS(0.962)PPRPAT(0.007)S(0.007)PENNASLSDTSPMDSSPSGIPK;GQKPALDCS(0.04)QVS(0.878)PPRPAT(0.04)S(0.04)PENNAS(0.001)LSDTSPMDSSPSGIPK 222.53 3.488e-23 13034490000.0 2642580.0 2874930.0 2096290.0 2017370.0 1905130.0 2651890.0 2092090.0 2486020.0 2953700.0 2835810.0 True False 2495990.819547374 2736814.047442094 2231420.2075825892 2209100.23825559 2055052.8922930886 2635338.570841349 2303578.8740307936 2477396.5768614314 2417382.536717687 2810686.929626794 0.8880358723832661 0.9737171431631095 0.7939056406680197 0.7859645323603923 0.7311568110383466 0.9376136997197593 0.819578605411121 0.8814203213982222 0.8600682314478437 1.0 21.422491336372754 -8.852566172777006 0.8188379382834867 1.0025106197777849 0.8466869561117316 0.29519240849400663 0.06890978443648224 5.5765216329212555 4.28024442369649 0.11156006888391579 0.024604886547077813 1.4042157091059646e-09 8.852566172777006 -0.15582366366605327 GQKS(ph)PGALETPSAAGSQGNTASQGK ddPTM_KYSE-520_SHP099_60min_R1 5 GQKSPGALETPSAAGSQGNTASQGK 25 1 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 GQKS(1)PGALETPSAAGSQGNTASQGK;GQKS(0.998)PGALET(0.001)PSAAGSQGNTASQGK;GQKS(1)PGALETPSAAGSQGNTASQGK;GQKS(1)PGALETPSAAGSQGNTASQGK;GQKS(0.998)PGALET(0.002)PSAAGSQGNTASQGK 306.14 5.1060999999999994e-61 8227900000.0 3108720.0 4049650.0 3252840.0 1828220.0 2216200.0 2953140.0 1924410.0 2266080.0 4683560.0 2931590.0 True False 2936273.1045203162 3855098.7353514293 3462523.271128017 2001973.4791256133 2390602.3315469013 2934708.3578483374 2118948.143231695 2258219.497387047 3833143.5669396003 2905618.3933425075 1.010550150442345 1.3267739301845063 1.191664837702541 0.6890008280896869 0.8227516514296455 1.0100116259493959 0.7292589240509803 0.777190667074929 1.319217821487599 1.0 21.470413809740485 -5.231081844470695 23.245893931756385 0.8908961588983689 1.1913743242694208 0.303201148085819 0.18575334790920497 326.0162083261227 249641.10894520744 0.04959706920847253 0.08588304581048962 5.8737864832630586e-06 5.231081844470695 0.3004781653710519 GQPAIIDGELYNEVKVEESSWLIEDGK ddPTM_KYSE-520_SHP099_60min_R1 1 GQPAIIDGELYNEVKVEESSWLIEDGK 27 1 Q9Y266 Q9Y266 NUDC Nuclear migration protein nudC 0 69.98100000000001 0.028425 41083000.0 26180.0 26460.0 20245.0 23661.0 17722.0 15525.0 11108.0 18495.0 27454.0 12290.0 False True 24727.743211463865 25188.821882730284 21550.025093145305 25909.734326060952 19116.620575613273 15428.10271629365 12230.905043632942 18430.845161765446 22469.045659020027 12181.12016147531 2.030005687791276 2.0678575983835916 1.7691332822822499 2.127040369243259 1.5693647482497188 1.2665586179083455 1.0040870528734365 1.513066525692429 1.8445795921200978 1.0 13.572359187432287 -5.935884045317077 4.106303306870999 1.3426564235600065 1.9849021343139972 0.6261314487902071 0.24466392219350716 0.15613593059345393 5.312068109252379 0.08149579090579652 0.09208114373241727 1.1590867858292818e-06 5.935884045317077 0.6422457107539907 GQPEGPLPSS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 GQPEGPLPSSSPR 13 0 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4 P49815 TSC2 Tuberin 1 GQPEGPLPS(0.004)S(0.639)S(0.357)PR 103.83 0.0018987000000000001 184180000.0 445180.0 457220.0 424290.0 345270.0 376460.0 446150.0 388710.0 465750.0 533200.0 425970.0 True False 420484.97795567184 435254.4648987887 451640.41228800314 378084.35699078895 406085.26023560425 443365.4123590606 428004.60024401825 464134.4219568674 436384.32087817666 422196.23719964543 0.9959467681300902 1.0309292848883644 1.0697404962290897 0.8955180640608194 0.9618400744854987 1.0501406059415088 1.0137574959997244 1.0993333930102993 1.0336054242753046 1.0 18.687554195240303 -6.279762573242085 23.872360054953205 1.0439751102171004 0.9921173275048244 0.19515234752554134 0.04883801604384721 800.6364320944969 1043104.3028311417 0.018222554464244235 0.016108479645433306 5.250944484691661e-07 6.279762573242085 -0.051857782712276035 GQS(ph)SPPPAPPICLR ddPTM_KYSE-520_SHP099_60min_R1 2 GQSSPPPAPPICLR 14 0 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 GQS(0.5)S(0.5)PPPAPPICLR;GQS(0.5)S(0.5)PPPAPPICLR 142.45 5.231900000000001e-06 662750000.0 978360.0 1093540.0 870210.0 722820.0 772320.0 1076160.0 793390.0 981280.0 1044890.0 1043940.0 True False 924088.4204876919 1041004.6969629952 926305.1289852296 791516.5954762425 833097.1901003069 1069443.2862587157 873593.6039402185 977876.1687124738 855164.3155333808 1034691.5037730309 0.8931052561251137 1.0061015222092218 0.8952476420338165 0.7649783462896482 0.8051648119873365 1.0335866123950583 0.8443034476987927 0.9450895896473698 0.8264920630110528 1.0 19.980769257513476 -7.310895963510918 24.99358168917161 0.9143430624757001 0.8935590887204082 0.024271750464112674 0.0866311156610737 3082.8034903731545 1557921.8795899295 0.04898704462384868 0.023532697384120862 4.887694314393217e-08 7.310895963510918 -0.02078397375529184 GQSPPS(ph)KDGSGDYQSR ddPTM_KYSE-520_SHP099_60min_R1 1 GQSPPSKDGSGDYQSR 16 1 Q8N4C8;Q8N4C8-4 Q8N4C8 MINK1 Misshapen-like kinase 1 1 GQS(0.422)PPS(0.574)KDGS(0.004)GDYQSR 52.86600000000001 0.047366000000000005 613910000.0 516390.0 528320.0 493400.0 405290.0 498670.0 484540.0 494510.0 443700.0 759890.0 421370.0 True False 487744.8173020561 502938.71417551243 525205.3534679118 443808.63974511815 537912.4919558213 481515.80612901266 544499.8967525134 442160.90826035815 621913.1312680377 417636.98962089943 1.1678678599441 1.204248490135042 1.2575642639907332 1.0626660252195943 1.287990540407111 1.1529529665609788 1.3037635800573384 1.0587206575301669 1.4891236809090242 1.0 18.67188996982004 GQSQLS(ph)NPTDDSWK ddPTM_KYSE-520_SHP099_60min_R1 5 GQSQLSNPTDDSWK 14 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 GQSQLS(0.999)NPT(0.001)DDSWK;GQSQLS(0.997)NPT(0.003)DDSWK;GQSQLS(0.993)NPT(0.007)DDSWK;GQSQLS(0.915)NPT(0.085)DDSWK;GQS(0.001)QLS(0.999)NPTDDSWK 305.35 3.2762999999999998e-34 3506620000.0 4694270.0 4460350.0 4138140.0 3984310.0 4405780.0 4502610.0 4205400.0 3920530.0 4862260.0 4042780.0 True False 4433869.485304755 4246068.090878158 4404891.125658106 4362977.624473521 4752489.820540874 4474507.540831625 4630522.872748827 3906930.5964885824 3979396.15160001 4006964.1144352444 1.1065408520459585 1.0596721032717842 1.099308853251097 1.088848689399469 1.1860574951045468 1.1166827086651556 1.1556187528775683 0.9750350851443148 0.9931199875896269 1.0 21.9340781586641 -7.26913371387115 24.99232270608799 0.9880581406056355 1.1149522393600964 0.7522136974306719 0.033321624644724435 315.26545072467405 1024020.976974209 0.019147169462724663 0.009476797027279472 5.3810408145282086e-08 7.26913371387115 0.1268940987544609 GQSQT(ph)SPDHR ddPTM_KYSE-520_SHP099_60min_R1 1 GQSQTSPDHR 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GQS(0.31)QT(0.663)S(0.027)PDHR 113.61 0.007988 124140000.0 61052.0 59905.0 60431.0 83149.0 62399.0 92512.0 80047.0 43223.0 79271.0 111070.0 True False 57665.32385585535 57027.073880761825 64326.47895301867 91051.45596034169 67309.44629825607 91934.59829241603 88138.93194343582 43073.069501324055 64877.38465929107 110086.00621115242 0.5238206547819471 0.5180229153865391 0.5843293000350664 0.8270938250380236 0.6114259987700161 0.8351161192647797 0.8006370198804322 0.3912674370138107 0.589333620976783 1.0 16.748271564112155 -5.0346307505411145 8.915223443311415 0.7006664587457463 0.5282083275678813 0.21253652997467642 0.15807194070162928 0.6229813358711775 155.01168686982064 0.043545346519173786 0.07721190206553613 9.233561570430629e-06 5.0346307505411145 -0.17245813117786502 GQSS(ph)PPPAPPICLR ddPTM_KYSE-520_SHP099_60min_R1 7 GQSSPPPAPPICLR 14 0 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 GQS(0.009)S(0.991)PPPAPPICLR;GQS(0.005)S(0.995)PPPAPPICLR;GQS(0.002)S(0.998)PPPAPPICLR;GQS(0.003)S(0.997)PPPAPPICLR;GQS(0.156)S(0.844)PPPAPPICLR;GQS(0.022)S(0.978)PPPAPPICLR;GQS(0.118)S(0.882)PPPAPPICLR 220.85 5.3928e-14 9378220000.0 7019800.0 7832100.0 6051470.0 4902090.0 5274600.0 7994380.0 6046980.0 7789500.0 7707420.0 8002310.0 True False 6630397.700375628 7455834.159778222 6441557.438894346 5367983.159732896 5689681.0116312895 7944484.109055301 6658267.751237624 7762480.042582973 6307946.816246962 7931415.759102967 0.8359664783384798 0.9400382461631879 0.8121573290999536 0.6768001227992628 0.7173600759865835 1.0016476692622418 0.8394803593035535 0.9787004336109724 0.7953115821733676 1.0 22.919146979557592 -6.260298218213845 24.999893523533565 0.9164750562384154 0.7986645826647731 0.32752150336846564 0.09040627069008984 146.54981676201592 3210551.884474081 0.03226778449766047 0.03057283729766927 5.491636486095359e-07 6.260298218213845 -0.11781047357364227 GQTPLTEGSEDLDGHS(ph)DPEESFAR ddPTM_KYSE-520_SHP099_60min_R1 2 GQTPLTEGSEDLDGHSDPEESFAR 24 0 K7EQI9;Q86VR2-2;Q86VR2 K7EQI9 FAM134C Protein FAM134C 1 GQTPLTEGSEDLDGHS(1)DPEESFAR;GQTPLTEGSEDLDGHS(1)DPEESFAR 220.78 2.3806e-21 1347010000.0 269920.0 316094.0 225951.0 326220.0 332193.0 261745.0 277886.0 334560.0 386020.0 234787.0 True False 254946.99952781975 300908.36977323267 240516.16299438252 357223.8507183804 358334.6991803806 260111.35236562238 305977.4287860084 333399.4894468908 315928.4987723067 232706.9698415221 1.0955709650701202 1.2930784581921075 1.0335580543985365 1.535080152354941 1.539853745783435 1.1177634797220006 1.3148614714651 1.4327009185584008 1.3576237058454246 1.0 17.828154896203767 -5.248621071455306 24.945169782223406 1.3457845916819895 1.155970103077132 0.1960807458989029 0.17062784508909343 1233.3763546598923 2400217.4092045124 0.04573357328168415 0.07859621350640285 5.6412965286452195e-06 5.248621071455306 -0.1898144886048574 GQVIIIS(ph)DS(ph)DDDDDER ddPTM_KYSE-520_SHP099_60min_R1 1 GQVIIISDSDDDDDER 16 0 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 2 GQVIIIS(1)DS(1)DDDDDER 189.07 4.1802e-12 346940000.0 363690.0 342180.0 335320.0 299910.0 339680.0 330410.0 310210.0 316710.0 388560.0 347550.0 True False 343515.3907019594 325741.159177349 356935.2637309694 328413.35622877016 366410.88348517806 328347.78863063373 341569.0541578479 315611.40693067 318007.2988004957 344470.9773898088 0.9972259297573042 0.9456272968063001 1.0361838504817078 0.9533846906850804 1.0636915953315327 0.9531943478044311 0.9915757105171823 0.9162206039016145 0.9231758832345217 1.0 18.394022911532968 -7.242547819402587 22.40720114153676 0.9397736914498803 0.991335862585309 0.19823206472782207 0.040894044622028954 277.4926683933006 329133.7333756376 0.018215444156129565 0.010482322342264035 5.7207396112529536e-08 7.242547819402587 0.051562171135428714 GQVQEVGWHDVAGWLGR ddPTM_KYSE-520_SHP099_60min_R1 1 GQVQEVGWHDVAGWLGR 17 0 P17858;P17858-2 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type 0 148.44 1.1177e-05 422010000.0 165220.0 147100.0 118660.0 139380.0 155150.0 138080.0 125910.0 137450.0 111090.0 93682.0 False True 156054.9172420954 140033.09519839866 126309.01346271278 152626.6332938751 167359.4223172553 137218.1915018248 138638.21156318195 136973.2180310713 90918.85635100663 92852.05036349317 1.6806835889049128 1.5081314268258288 1.360325517511393 1.6437615830385972 1.8024310896968232 1.4778154167263835 1.4931087791863196 1.4751770961960937 0.9791798457339547 1.0 16.50264614772397 -7.719398109989318 3.916262045501922 0.9732945480761414 1.5603441013869446 0.7916343822683898 0.11666328860773731 0.09859664116438357 3.007471953542532 0.10549843107367138 0.03239220768940532 1.908103332404903e-08 7.719398109989318 0.5870495533108032 GQYQDHAIDRR ddPTM_KYSE-520_SHP099_60min_R1 3 GQYQDHAIDRR 11 1 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 0 ;; 132.5 0.00026561 1309590000.0 773540.0 754780.0 556490.0 451820.0 755360.0 729110.0 509570.0 592970.0 615210.0 497840.0 False True 730630.1941862399 718519.2358521221 592362.2358154814 494760.8369553642 814802.534589508 724559.3540403784 561082.3085239496 590913.1254702384 503503.37218203937 493429.52491365914 1.4807184355538643 1.4561739814370642 1.2005001847409387 1.0026980794105056 1.6513047830530267 1.468415077446293 1.1371072872506534 1.1975633715344396 1.020415979911504 1.0 18.912484517947 -7.189741602032176 1.7398740413346838 1.0412469165263718 1.3623746499397094 0.3867232917665452 0.17466924497929562 0.4671042175700499 2.6309416537527546 0.13634155250716345 0.057184381023238334 6.460384968292951e-08 7.189741602032176 0.32112773341333756 GRAEGEWEDQEALDYFS(ph)DKES(ph)GKQK ddPTM_KYSE-520_SHP099_60min_R1 4 GRAEGEWEDQEALDYFSDKESGKQK 25 3 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 2 GRAEGEWEDQEALDY(0.225)FS(0.804)DKES(0.971)GKQK;GRAEGEWEDQEALDY(0.002)FS(0.998)DKES(1)GKQK;GRAEGEWEDQEALDY(0.005)FS(0.995)DKES(1)GKQK;GRAEGEWEDQEALDY(0.031)FS(0.97)DKES(1)GKQK 104.31 0.0017205999999999999 2734120000.0 801420.0 752390.0 711396.0 674682.0 702013.0 709781.0 613801.0 608132.0 921169.0 649345.0 True False 756963.6350088379 716244.0550395864 757253.7244338443 738803.5744294602 757257.4291924171 705350.9934991057 675849.9952004802 606022.5320310753 753907.9303807755 643592.3084827658 1.176153948752649 1.1128847340144465 1.176604683513122 1.1479372340094458 1.1766104398879635 1.0959593273604102 1.050121305510565 0.9416248827767081 1.1714060600849516 1.0 19.295787559074807 -6.564063269253174 2.828959275031473 1.03553878318688 1.1556697162619964 0.48715979477140103 0.056589340777253104 0.2224253193231666 3.625152516717318 0.0222571703971099 0.017106484527745915 2.7285802465343256e-07 6.564063269253174 0.12013093307511635 GRAEGEWEDQEALDYFS(ph)DKESGK ddPTM_KYSE-520_SHP099_60min_R1 18 GRAEGEWEDQEALDYFSDKESGK 23 2 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 GRAEGEWEDQEALDY(0.027)FS(0.962)DKES(0.011)GK;GRAEGEWEDQEALDY(0.352)FS(0.637)DKES(0.01)GK;GRAEGEWEDQEALDY(0.177)FS(0.487)DKES(0.336)GK;GRAEGEWEDQEALDYFS(0.996)DKES(0.004)GK;GRAEGEWEDQEALDYFS(0.998)DKES(0.002)GK;GRAEGEWEDQEALDYFS(0.995)DKES(0.005)GK;GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDYFS(0.999)DKES(0.001)GK;GRAEGEWEDQEALDYFS(0.999)DKESGK;GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDY(0.428)FS(0.558)DKES(0.014)GK;GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDY(0.086)FS(0.879)DKES(0.035)GK;GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDYFS(1)DKESGK;GRAEGEWEDQEALDYFS(0.998)DKES(0.002)GK 257.92 1.7353999999999999e-37 96917370000.0 40243901.0 38070396.0 38813268.0 36112877.0 37020700.0 34052999.0 33826974.0 35865757.0 47811669.0 31899141.0 True False 38011491.58730232 36241437.03133061 41315233.35870455 39545033.97234758 39934018.47103068 33840461.601922415 37246534.651372 35741347.06009762 39130275.14369321 31616539.427896153 1.20226603781196 1.1462809556998441 1.3067601358753063 1.2507704729207616 1.2630736694666775 1.0703404678142616 1.178071203406542 1.130463602495409 1.2376520597054173 1.0 24.914176131103538 -6.248421797777682 24.960680140803795 1.1348822984612694 1.2339591896618185 0.37431560396385877 0.07065939181955538 929.5012562114318 1782281.8195859431 0.023028149772290913 0.02288813847927718 5.643885601037214e-07 6.248421797777682 0.09907689120054908 GRAPS(ph)RDEGSLLLGSR ddPTM_KYSE-520_SHP099_60min_R1 3 GRAPSRDEGSLLLGSR 16 2 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 GRAPS(0.634)RDEGS(0.366)LLLGSR;GRAPS(0.998)RDEGS(0.002)LLLGSR;GRAPS(0.929)RDEGS(0.071)LLLGSR 163.85 4.285e-08 2192790000.0 484340.0 576010.0 506200.0 489450.0 570160.0 719100.0 898850.0 1038800.0 1308600.0 1054560.0 True False 457472.6946921475 548337.6149913638 538830.4619486369 535967.1808414919 615028.3482333632 714611.830163399 989714.5299306334 1035196.6452577423 1070991.227121498 1045217.4188352656 0.437681851113743 0.5246158407907151 0.5155199791341794 0.5127805671653894 0.5884214491169866 0.6836968244939166 0.9468982358077407 0.9904127376783579 1.0246588009554543 1.0 19.99537164220406 -6.608349715297188 1.422684877064887 1.0202434078333067 0.5012377207864451 0.9824167538758364 0.03015119627941629 0.04714018042807345 0.1944921045706309 0.0161501488165519 0.010916931500910077 2.464054360264489e-07 6.608349715297188 -0.5190056870468616 GRAPSRDEGS(ph)LLLGSR ddPTM_KYSE-520_SHP099_60min_R1 1 GRAPSRDEGSLLLGSR 16 2 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 GRAPS(0.085)RDEGS(0.882)LLLGS(0.033)R 93.40899999999999 0.0013277999999999999 651500000.0 70609.0 84753.0 107300.0 112150.0 130450.0 182180.0 239870.0 307140.0 386030.0 282420.0 True False 66692.17801444807 80681.33866315352 114216.72968607006 122808.70228087297 140715.67284103108 181042.94704376027 264118.40050560277 306074.6030270152 315936.6830243865 279917.9785194351 0.23825614334313844 0.28823207101558757 0.4080364194189829 0.4387310273189408 0.5027032332303764 0.6467714149742982 0.9435564014237287 1.0934438889775135 1.1286759239097985 1.0 18.094644625470035 -6.527311941466045 1.0107043634823372 1.115356474469394 0.3190604923411041 0.9640934036754959 0.06158277891425621 0.09318773263655317 0.1957231985798964 0.04226014086181874 0.029749482551581302 2.969532334297797e-07 6.527311941466045 -0.7962959821282899 down GRAS(ph)EHKDQLSR ddPTM_KYSE-520_SHP099_60min_R1 3 GRASEHKDQLSR 12 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 GRAS(1)EHKDQLSR;GRAS(1)EHKDQLSR;GRAS(1)EHKDQLSR 135.57 2.7305e-05 5021100000.0 1555460.0 1365970.0 1575970.0 1574600.0 1373130.0 1301400.0 1348090.0 1283990.0 1745950.0 1060490.0 True False 1469175.5330673635 1300346.7508372294 1677559.5478411552 1724249.5105792484 1481187.5189590266 1293277.4798701825 1484368.0932905239 1279536.13837552 1428929.4918178045 1051094.883648734 1.3977572871131472 1.2371354585261143 1.5960115246853201 1.6404318367469823 1.409185357098575 1.230409832631612 1.4122113201976023 1.217336472929811 1.3594676503965737 1.0 20.00346147838713 -6.126558450717124 4.815355292359644 1.26890056056859 1.467227707390847 0.34679238386256306 0.14497353930678505 0.30849242786794046 10.77852950811018 0.04975641724000968 0.05002149324593669 7.472080623717201e-07 6.126558450717124 0.19832714682225716 GRAS(ph)PGGVSTSSSDGK ddPTM_KYSE-520_SHP099_60min_R1 5 GRASPGGVSTSSSDGK 16 1 P54259 P54259 ATN1 Atrophin-1 1 GRAS(0.999)PGGVSTSSSDGK;GRAS(0.88)PGGVS(0.056)T(0.056)S(0.007)S(0.001)SDGK;GRAS(1)PGGVSTSSSDGK;GRAS(1)PGGVSTSSSDGK;GRAS(0.996)PGGVS(0.001)T(0.002)S(0.002)SSDGK 172.42 4.9306e-08 4719760000.0 6625590.0 5874160.0 5879750.0 5435430.0 5535930.0 6053320.0 5596150.0 5808710.0 7086580.0 6038860.0 True False 6258055.314913788 5591956.536306075 6258768.092932623 5952011.632978376 5971576.195866988 6015538.984514961 6161863.455160823 5788560.940773109 5799835.7101441715 5985360.398561986 1.0455603168720329 0.9342723184471183 1.0456794037726325 0.9944282777706047 0.9976970137506992 1.0050420666331514 1.029489127612306 0.9671198650233059 0.9690035894142001 1.0 22.51300668860055 -7.281957649737432 24.990112362247068 0.976046293214864 1.0051394112505547 0.14651662143156663 0.03124993241547258 1553.6442632245412 1892242.338469477 0.015979884062074765 0.007691797555072022 5.224471329908551e-08 7.281957649737432 0.0290931180356907 GRAS(ph)PGGVSTSSSDGKAEK ddPTM_KYSE-520_SHP099_60min_R1 1 GRASPGGVSTSSSDGKAEK 19 2 P54259 P54259 ATN1 Atrophin-1 1 GRAS(0.983)PGGVS(0.007)T(0.007)S(0.003)SSDGKAEK 109.75 2.1768000000000002e-05 0.0 154880.0 147040.0 153850.0 97326.0 115370.0 111420.0 82519.0 81535.0 175900.0 105070.0 True False 146288.49765437463 139975.97768846017 163767.41716870363 106575.83377787104 124448.96263449402 110724.5864508494 90860.82582783101 81252.174115412 143960.9940781532 104139.16154322316 1.404740498065728 1.344124300735443 1.572582443932311 1.0233982317366415 1.1950255868234663 1.0632367767325737 0.8724943093585312 0.7802268897823622 1.3823905622516646 1.0 16.66815317073792 -5.273536940809923 24.392408616905403 1.0358875001478973 1.4308465990792918 0.5497486124360472 0.16368635551773303 397.003721701174 800481.1118523998 0.046639684318189184 0.06981254939480706 5.326759133245831e-06 5.273536940809923 0.39495909893139447 GRAS(ph)SHS(ph)SQTQGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 1 GRASSHSSQTQGGGSVTK 18 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 GRAS(0.771)S(0.276)HS(0.558)S(0.389)QT(0.007)QGGGSVTK 76.417 0.0064986 611920000.0 745970.0 666950.0 603780.0 728100.0 538090.0 527610.0 486700.0 541970.0 625060.0 458210.0 True False 704589.5570456733 634908.7208876396 642700.6248821567 797298.4050887529 580434.6216867026 524316.9902830076 535900.3857342596 540090.0325667495 511564.86048033286 454150.61588198616 1.5514446802572766 1.398013563528062 1.4151706557393868 1.7555814683645299 1.2780663537347974 1.1545002295433517 1.1800058548715404 1.1892310913591169 1.1264211532265458 1.0 18.7928113110504 -5.969318746276284 8.659901068553248 1.1526738568877275 1.5136105183818134 0.7636842720000162 0.10447288620523139 0.1316742428969808 33.436421903887606 0.03257802080857173 0.03677063053010987 1.0732014572877486e-06 5.969318746276284 0.3609366614940859 GRAS(ph)SHSS(ph)QTQGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 1 GRASSHSSQTQGGGSVTK 18 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 GRAS(0.903)S(0.089)HS(0.382)S(0.623)QT(0.002)QGGGSVTK 121.69 3.8812e-05 598430000.0 754700.0 717510.0 655630.0 749960.0 575100.0 528220.0 484260.0 545630.0 703440.0 541590.0 True False 712835.2865428487 683039.7425955329 697892.9588450906 821235.9729163051 620357.0981286089 524923.1830467399 533213.7267221535 543737.336881 575713.028279341 536791.9339506436 1.32795454152333 1.272447850638412 1.3001181923669882 1.529896261428949 1.1556751487730976 0.9778894760646776 0.9933340890535454 1.0129387244686037 1.0725068538982108 1.0 19.0340034676276 -5.982130693122263 6.2128123750906 1.0161660337411569 1.3483187041169842 0.8494830533420136 0.06863467190421471 0.061985235750920555 8.90443624809363 0.0225902937057045 0.02504135424357355 1.0420038098795231e-06 5.982130693122263 0.3321526703758273 GRAS(ph)SHSSQTQGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 2 GRASSHSSQTQGGGSVTK 18 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 GRAS(0.968)S(0.03)HS(0.002)S(0.001)QTQGGGSVTK;GRAS(0.871)S(0.021)HS(0.105)S(0.003)QTQGGGSVTK 181.81 1.1764e-09 944870000.0 226734.0 300545.0 415270.0 177719.0 174833.0 254123.0 170755.0 177273.0 205914.0 232001.0 True False 214156.61303697672 286106.3670727577 442038.9686554924 194609.36032683408 188591.3624363049 252536.92409485948 188016.58180820517 176658.08133882913 168525.20826952168 229945.6516340467 0.9313357809340188 1.2442347356413137 1.9223628084039068 0.8463276384828119 0.8201562460352317 1.0982461390344807 0.8176566091688018 0.7682601522727487 0.7328914770596564 1.0 17.810933390461628 GRASPGGVS(ph)TSSSDGK ddPTM_KYSE-520_SHP099_60min_R1 1 GRASPGGVSTSSSDGK 16 1 P54259 P54259 ATN1 Atrophin-1 1 GRAS(0.005)PGGVS(0.666)T(0.033)S(0.004)S(0.259)S(0.033)DGK 236.21 8.4493e-23 1141500000.0 1116200.0 911980.0 881940.0 761300.0 782910.0 861200.0 837900.0 790040.0 1008900.0 827930.0 True False 1054282.1609104662 868167.1118901117 938791.2635538928 833653.7231068095 844520.5628514489 855824.9313540793 922603.1091159567 787299.535636723 825709.1922993113 820595.1843197925 1.2847774165094343 1.057972467398468 1.144037013003038 1.0159134967357157 1.0291561283673492 1.0429319446512342 1.1243096800290395 0.9594250011219979 1.0062320716441417 1.0 19.64631116220572 -1.000000000009345 0.7635346857010008 1.0288971729754979 47.99563678825266 0.6754819773111878 0.05130154654104508 248.21361554133216 1.0082268036335342 0.01878456153910648 20085.105926538523 0.09999999999784824 1.000000000009345 46.96673961527716 GRASPGGVSTSS(ph)SDGK ddPTM_KYSE-520_SHP099_60min_R1 1 GRASPGGVSTSSSDGK 16 1 P54259 P54259 ATN1 Atrophin-1 1 GRAS(0.04)PGGVS(0.095)T(0.095)S(0.095)S(0.581)S(0.095)DGK 169.57 6.2359e-08 595380000.0 637850.0 546090.0 514980.0 553570.0 557530.0 557360.0 550210.0 545110.0 622690.0 567820.0 True False 602467.1889775496 519855.01670219924 548176.4347971327 606181.1263631103 601404.4390882336 553881.3094978052 605830.5963321285 543219.1406396305 509625.1927374941 562789.5565572759 1.0705017212170596 0.923711200119423 0.9740344830676402 1.0771008795388304 1.068613360146863 0.9841712644528006 1.0764780356589154 0.9652260499690816 0.9055342033263702 1.0 19.102236031790895 -7.501960812213676 23.25722718203004 0.9469714401901528 1.021184589104182 0.25311445850758185 0.05337501065663287 405.95233778102084 451356.43340433005 0.030309464521564383 0.014265721215910994 3.1480323583591256e-08 7.501960812213676 0.07421314891402919 GRASSHS(ph)SQTQGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 2 GRASSHSSQTQGGGSVTK 18 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 GRAS(0.241)S(0.038)HS(0.657)S(0.061)QT(0.003)QGGGSVTK;GRAS(0.119)S(0.119)HS(0.681)S(0.081)QTQGGGSVTK 130.71 1.5119e-05 1042830000.0 242122.0 331780.0 461630.0 191848.0 199202.0 285441.0 180538.0 161713.0 226598.0 239307.0 True False 228691.01000175925 315840.79078806716 491387.40843411547 210081.1762387955 214878.06409566148 283659.4568400373 198788.54292108424 161152.05534709786 185453.51527072984 237186.92615802857 0.9641805039852457 1.3316112987510724 2.071730581417978 0.8857198819585295 0.905943964012993 1.195932092188951 0.8381091915185875 0.6794305991373589 0.7818875950488487 1.0 17.85566496456189 -5.403171300438127 19.479630900724214 0.8948149568082515 1.4494446779569223 0.44907860097159036 0.28301231629561746 3.45433485764904 549.4129085226573 0.08222542750916835 0.12195992028596975 3.952107048469834e-06 5.403171300438127 0.5546297211486708 GRASSHSS(ph)QTQGGGSVTK ddPTM_KYSE-520_SHP099_60min_R1 1 GRASSHSSQTQGGGSVTK 18 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 GRAS(0.189)S(0.224)HS(0.266)S(0.317)QT(0.004)QGGGSVTK 62.273999999999994 0.015363 128030000.0 36931.0 55811.0 82772.0 35952.0 30758.0 45563.0 31220.0 28968.0 40382.0 40521.0 True False 34882.363809876726 53129.755785981106 88107.61555988262 39368.86727063708 33178.47961091936 45278.62441626332 34376.02227783765 28867.51676918204 33049.64674737913 40162.015464860975 0.8685411677209381 1.3228856961241404 2.1938046320651106 0.9802512850751266 0.8261159014778098 1.127399207738442 0.8559336945605811 0.7187765961207586 0.8229080728355208 1.0 15.293544049938724 -5.493506737355145 24.904394249175915 0.8891761204364285 1.4710530961505084 0.39352327360182315 0.31857263829814214 670.339642645302 568377.796562426 0.09175034381997012 0.13582193080935062 3.209913007373371e-06 5.493506737355145 0.5818769757140799 GRDS(ph)PYQSR ddPTM_KYSE-520_SHP099_60min_R1 9 GRDSPYQSR 9 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GRDS(0.974)PY(0.009)QS(0.017)R;GRDS(0.982)PY(0.015)QS(0.003)R;GRDS(0.901)PY(0.089)QS(0.009)R;GRDS(1)PYQSR;GRDS(0.995)PY(0.005)QSR;GRDS(1)PYQSR;GRDS(0.999)PY(0.001)QSR;GRDS(1)PYQSR;GRDS(1)PYQSR 111.63 0.00060216 92589200000.0 917837.2 812486.4 810275.8 769991.7 806545.1 786173.6 781695.1 809704.0 929896.9 789490.9 True False 866922.9408529033 773453.3337770501 862507.4745551188 843171.4796615541 870015.6107561261 781266.7989461095 860716.4693169919 806895.3258103341 761051.0637532306 782496.624840626 1.107893520984161 0.9884430286642862 1.1022507282134142 1.0775400850237353 1.1118458318377098 0.9984283307359095 1.0999618937555127 1.031180583014882 0.9725934139437812 1.0 19.57772500368821 -7.550351674111101 4.68322584876975 0.9884393640197143 1.0669215873017648 0.38752209079143696 0.04174067124765622 0.20065032822717835 10.89676241172204 0.027974693302936313 0.010367020275966704 2.8161016424980926e-08 7.550351674111101 0.07848222328205046 GRDSPYQS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 GRDSPYQSR 9 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GRDS(0.012)PYQS(0.988)R;GRDSPYQS(1)R;GRDS(0.315)PYQS(0.685)R 175.64 8.126e-05 30573100000.0 2049860.0 1935310.0 1812700.0 1627340.0 1956090.0 1802890.0 1777400.0 1809530.0 2068360.0 1836590.0 True False 1936150.1795053966 1842334.802640468 1929549.5424225458 1782001.904322389 2110023.1543703526 1791637.4947619126 1957076.9377523558 1803253.1627774753 1692797.9631125012 1820319.2414453994 1.0636322110005403 1.0120943407583758 1.0600061233712026 0.9789502103528912 1.1591500580386755 0.9842435623211276 1.0751284132987386 0.9906246781996476 0.9299456516035937 1.0 20.7957600569247 -7.4544808921657895 5.202875056462861 0.9631511048950637 1.0456131438736094 0.3128724845131572 0.05110937129475725 0.23304770093821042 12.006070430763852 0.02798656042503263 0.012595750522889195 3.511713748088389e-08 7.4544808921657895 0.08246203897854565 GRDSPYQSR ddPTM_KYSE-520_SHP099_60min_R1 2 GRDSPYQSR 9 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 0 ; 81.017 0.035450999999999996 0.0 247422.0 213831.0 181650.0 190525.0 212465.0 184946.0 182440.0 212348.0 266115.0 174524.0 False True 233697.00843647114 203558.23779312562 193359.44965027613 208632.4387165699 229184.7867395145 183791.68341176448 200882.8156428154 211611.41435039602 217795.22421323328 172977.8531376176 1.3510227130090846 1.1767878609938516 1.1178277805103949 1.2061222574579316 1.3249371672868422 1.0625156924889316 1.16132101306054 1.2233439744569055 1.2590931166197321 1.0 17.400227811640754 -6.265086205786853 24.97863688529851 1.156467905385941 1.2239350661775017 0.18676730680922193 0.09406844977468429 789.4514585242719 5407268.221476257 0.03310884251274121 0.03041179967071156 5.431425090893768e-07 6.265086205786853 0.06746716079156068 GRDWNVDLIPK ddPTM_KYSE-520_SHP099_60min_R1 2 GRDWNVDLIPK 11 1 P50395-2;P50395;V9GYJ7;V9GYF8;Q5SX90;Q5SX86;Q5SX87;G5E9U5;P31150 P50395-2 GDI2;GDI1 Rab GDP dissociation inhibitor beta;Rab GDP dissociation inhibitor alpha 0 ; 134.98 0.00012738 3668600000.0 8673500.0 7653200.0 5369400.0 4490500.0 7484500.0 7457900.0 5039600.0 5447900.0 6218000.0 5708000.0 False True 8192363.664806411 7285528.784312598 5715520.115343753 4917275.769881947 8073487.5690202825 7411352.479732459 5549051.949756267 5429002.506449423 5088967.943024207 5657431.560756806 1.4480711921701976 1.2877802773345433 1.010267654847101 0.8691710570554658 1.4270588132294215 1.31002070465012 0.9808429656043348 0.9596231873325877 0.8995191348533865 1.0 22.431715796310115 -4.5729288532978565 3.7178089166182997 1.069099809058673 1.4236791610696173 0.3659412965765946 0.16876992697725685 0.25868202314582234 7.177552246325794 0.04816512965022809 0.1650833613193778 2.673444340013974e-05 4.5729288532978565 0.35457935201094437 GREDVSNFDDEFTSEAPILT(ph)PPREPR ddPTM_KYSE-520_SHP099_60min_R1 16 GREDVSNFDDEFTSEAPILTPPREPR 26 2 Q16513-3;Q16513-2;Q16513;Q16513-4;Q16513-5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTS(0.001)EAPILT(0.999)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFTSEAPILT(1)PPREPR;GREDVSNFDDEFT(0.004)S(0.035)EAPILT(0.96)PPREPR 231.53 5.7487e-23 53283730000.0 6587880.0 7051820.0 6017430.0 4981970.0 5149860.0 6441350.0 5087470.0 6095160.0 7773930.0 6447220.0 True False 6222437.163786807 6713039.982202382 6405323.166028419 5455454.930916105 5555124.683304807 6401147.145352529 5601761.116522445 6074017.312581045 6362380.276827618 6390102.646661255 0.9737616917684334 1.050537112374847 1.0023818896516656 0.8537351013862836 0.8693326211602074 1.0017283757870534 0.8766308502805182 0.9505351710984862 0.995661670654364 1.0 22.60740767524445 -5.030867240966133 23.659710592718604 0.930662108654848 1.0157269398644657 0.2721028101789106 0.054817257040582996 388.20428725432345 297558.3762122833 0.014864995221246248 0.02580044178800585 9.313925483858912e-06 5.030867240966133 0.08506483120961772 GREEYEGPNKKPR ddPTM_KYSE-520_SHP099_60min_R1 4 GREEYEGPNKKPR 13 3 P23246 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ;;; 162.48 5.133e-07 9680300000.0 6778680.0 5527780.0 4910940.0 4409650.0 6924320.0 5512640.0 4591290.0 4826330.0 5419780.0 3181990.0 False True 6402653.107436439 5262217.151433055 5227507.050181819 4828741.810190381 7469224.590008493 5478233.568950018 5055422.399872293 4809588.587703886 4435684.573535495 3153800.0441507567 2.0301392028043175 1.6685322714712705 1.6575264687046647 1.5310868611172987 2.368325348926735 1.7370262832960217 1.6029622452597807 1.5250137993447186 1.4064571347071306 1.0 21.58865976323294 -7.835164844787368 0.9026431447518564 1.0140261965527375 1.8206617916567076 0.5714480827114294 0.2250839131803776 0.4274419740756755 0.7698553835478196 0.22184978292702115 0.07965925670472905 1.461622282425996e-08 7.835164844787368 0.8066355951039701 GREGS(ph)LTGTK ddPTM_KYSE-520_SHP099_60min_R1 3 GREGSLTGTK 10 1 Q9Y6D6;E5RHL7;E5RIF2 Q9Y6D6 ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 1 1 GREGS(0.999)LT(0.001)GTK;GREGS(0.6)LT(0.398)GT(0.002)K;GREGS(0.705)LT(0.295)GTK 153.64 0.00019679 1785070000.0 3138800.0 2661220.0 2604400.0 2264960.0 2246110.0 2470010.0 2267290.0 2243370.0 2804790.0 2342700.0 True False 2964684.5069573284 2533370.996627345 2772283.7911873325 2480221.1174149453 2422866.0783822765 2454593.75138631 2496489.7998180166 2235588.273076495 2295510.8390020654 2321945.500593021 1.2768105479651235 1.0910553223494377 1.1939486910779327 1.0681650868986807 1.0434638012664297 1.0571280638410379 1.0751715745181862 0.962808245286347 0.988615296274523 1.0 21.146902679793413 -1.0000000000000002 0.2723020665040317 0.9799954795956949 2.922779669913658 0.7651595516033474 0.0439265418527975 24.3070762663629 0.34028594275079577 0.049875391723906065 22.260891090176173 0.09999999999999995 1.0000000000000002 1.9427841903179632 GRES(ph)PAAGPR ddPTM_KYSE-520_SHP099_60min_R1 4 GRESPAAGPR 10 1 A0A0C4DGI9;J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9 A0A0C4DGI9 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 GRES(1)PAAGPR;GRES(1)PAAGPR;GRES(1)PAAGPR;GRES(1)PAAGPR 90.412 0.002366 2309260000.0 1111270.0 1047286.0 1054222.0 962945.0 998014.0 952639.0 904947.0 987713.0 1216327.0 929657.0 True False 1049625.637838177 996972.8085516645 1122178.8369348382 1054463.0032800278 1076552.023877107 946693.2266375045 996427.8741916184 984286.8541369463 995472.6779084586 921420.9622422011 1.1391380062420118 1.0819949289254438 1.2178785624803994 1.1443879035637305 1.1683606820246497 1.0274274901819094 1.0814035224105323 1.0682271127647958 1.0803668667207862 1.0 19.81350089393186 -6.256973230804912 24.996798938610283 1.0576190998309603 1.1499745381097901 0.6155229553268087 0.03891794069383625 276.4158430587986 1547087.6330552457 0.013021995190362293 0.012589969066256134 5.53384217854387e-07 6.256973230804912 0.09235543827882986 GRGS(ph)WGGR ddPTM_KYSE-520_SHP099_60min_R1 6 GRGSWGGR 8 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 GRGS(1)WGGR;GRGS(1)WGGR;GRGS(1)WGGR;GRGS(1)WGGR;GRGS(1)WGGR;GRGS(1)WGGR 97.45200000000001 0.0020655 4136870000.0 861647.0 757507.0 783347.0 733404.0 712780.0 738790.0 690430.0 719564.0 926996.0 727250.0 True False 813849.7232592894 721115.2266788116 833842.8010195156 803106.4956540476 768871.7308365663 734178.9375697647 760225.4023474515 717068.0004314997 758676.8940674928 720807.1307919386 1.129081120999908 1.0004274317965396 1.1568181908846915 1.1141766796503358 1.0666816378353803 1.0185511577322142 1.0546862952260263 0.9948125785654606 1.0525379975555282 1.0 19.459253757934658 -6.059952234770084 3.603397764841026 1.0259461457651937 1.0968326659292356 0.4217524815861208 0.041865560662625666 0.2546992426656793 6.560957344941805 0.01399585193221443 0.014542116949989248 8.710593868535651e-07 6.059952234770084 0.07088652016404184 GRKDDDS(ph)DDESQSSHTGK ddPTM_KYSE-520_SHP099_60min_R1 5 GRKDDDSDDESQSSHTGK 18 2 O94874-3;O94874-2;O94874 O94874-3 UFL1 E3 UFM1-protein ligase 1 1 GRKDDDS(0.998)DDES(0.002)QSSHTGK;GRKDDDS(0.993)DDES(0.007)QSSHTGK;GRKDDDS(1)DDESQSSHTGK;GRKDDDS(0.991)DDES(0.009)QSSHTGK;GRKDDDS(0.741)DDES(0.247)QS(0.009)S(0.003)HTGK 263.16 4.881499999999999e-30 2016590000.0 1228560.0 1791260.0 1699230.0 4513180.0 1559390.0 1320535.0 1262664.0 1107878.0 1941870.0 993910.0 True False 1160409.3277263592 1705205.1808639248 1808765.0846641301 4942111.270262957 1682105.1212845962 1312293.0512374141 1390306.399533107 1104035.0297986683 1589275.3585590874 985104.7306502798 1.1779552890385154 1.7309887241514899 1.8361145047696015 5.016838429961257 1.707539380279108 1.332135569353274 1.4113285179488972 1.120728583924149 1.613305985760506 1.0 19.909917586171066 -5.987542395786353 24.996241294511023 1.3335677395037193 2.4735729392154933 0.23744923331595624 0.9667201892613487 361.078997764983 724502.3421186135 0.31632188305831044 0.35845266412473314 1.029100061639854e-06 5.987542395786353 1.140005199711774 GRLDSSEMDHS(ph)ENEDYTMSSPLPGKK ddPTM_KYSE-520_SHP099_60min_R1 3 GRLDSSEMDHSENEDYTMSSPLPGKK 26 2 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 GRLDSSEMDHS(1)ENEDYTMSSPLPGKK;GRLDSSEMDHS(0.999)ENEDYTMSSPLPGKK;GRLDSSEMDHS(1)ENEDYTMSSPLPGKK 200.48 7.5112e-16 1515960000.0 349620.0 466390.0 359820.0 429790.0 311883.0 339225.0 255479.0 226761.0 373786.0 296086.0 True False 330225.8816498089 443983.9243343378 383014.57293235586 470637.11237892485 336426.41772847314 337107.77094587527 281305.31055476255 225974.41901741517 305915.8847782639 293462.9083914225 1.1252729806976212 1.5129132562884218 1.3051549684142327 1.603736277809891 1.1464018385578927 1.1487236080146763 0.9585719438844924 0.7700271910207106 1.0424345838290119 1.0 18.16281864298042 -6.342124923138871 1.6535819571133903 0.9245970293280268 1.382811026590209 0.6254784456147071 0.146887558508359 0.22440670701719462 1.2183725063210533 0.06291323638829029 0.05389699221433642 4.548572034040355e-07 6.342124923138871 0.45821399726218215 GRLGS(ph)VDSFER ddPTM_KYSE-520_SHP099_60min_R1 1 GRLGSVDSFER 11 1 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 1 GRLGS(0.999)VDS(0.001)FER 108.34 0.00031022 525380000.0 379620.0 403010.0 338210.0 267960.0 343890.0 378680.0 306910.0 371190.0 536530.0 404400.0 True False 358561.7218462917 383648.7946696575 360011.5577551332 293426.8378348881 370952.186533554 376316.51765578653 337935.4579529516 369902.42852639727 439109.6768206463 400817.33061843883 0.8945763929245547 0.957166183602163 0.8981935915786261 0.7320712340011516 0.9254893892966041 0.9388728702802124 0.8431158838155426 0.922870345839733 1.0955356549656285 1.0 18.612585363850002 -7.632342724296891 5.308093152895209 1.0452048137667398 0.8852818756674984 0.5088916359117401 0.06320060421786283 0.171850494386106 7.1821858199683275 0.046892188067416005 0.016710938729900742 2.3316173359196958e-08 7.632342724296891 -0.1599229380992414 GRLGSVDS(ph)FER ddPTM_KYSE-520_SHP099_60min_R1 4 GRLGSVDSFER 11 1 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 1 GRLGS(0.093)VDS(0.907)FER;GRLGS(0.285)VDS(0.715)FER;GRLGS(0.4)VDS(0.6)FER;GRLGS(0.413)VDS(0.587)FER 145.81 0.00011481 6538030000.0 3739930.0 3667600.0 3727840.0 3003050.0 3512050.0 3922310.0 3624320.0 3833650.0 5254960.0 4060160.0 True False 3532468.6275343797 3491402.990820168 3968142.5311548943 3288458.9691000907 3788428.3541689734 3897829.4083829797 3990701.635554528 3820351.9629306393 4300791.7307614125 4024190.141156682 0.8778085785278115 0.8676038826079492 0.9860723256019712 0.8171728605634131 0.941413855032222 0.968599711161416 0.9916781999787594 0.949346782563447 1.0687347217458334 1.0 21.940267042763605 -6.216236280710875 2.287391008792859 0.9962990021724736 0.8922597084957393 0.5207171382594169 0.04875718863814529 0.2638934920889311 2.712880697636121 0.018101255393533036 0.017210804468780865 6.078042315001608e-07 6.216236280710875 -0.10403929367673426 GRLPLLAVCDYK ddPTM_KYSE-520_SHP099_60min_R1 1 GRLPLLAVCDYK 12 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 83.53 0.0059394 559140000.0 938280.0 991010.0 756220.0 671960.0 1075300.0 1065400.0 761520.0 744100.0 802110.0 712790.0 False True 886231.7379851921 943400.3920636626 804967.1511947803 735822.8763678592 1159919.9923799215 1058750.443409935 838501.8733189906 741518.8907742451 656467.043547627 706475.2351422282 1.2544413362299602 1.3353622959957492 1.1394131190355505 1.0415409341556363 1.6418409799550941 1.4986377310123074 1.1868807731812179 1.0496035160028814 0.9292145158003543 1.0 19.430279463497516 -7.1978558462367666 2.915981611620403 0.9797284715675078 1.313836322334159 0.448176140894727 0.16104552263692715 0.2813696481246534 4.675456653485595 0.10231105914968987 0.05005508828525265 6.340801442110573e-08 7.1978558462367666 0.33410785076665117 GRLPNNS(ph)SRPS(ph)TPTINVLESK ddPTM_KYSE-520_SHP099_60min_R1 1 GRLPNNSSRPSTPTINVLESK 21 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 2 GRLPNNS(0.498)S(0.503)RPS(0.453)T(0.453)PT(0.088)INVLES(0.005)K 50.226000000000006 0.061623000000000004 1403200000.0 866060.0 848550.0 715260.0 756760.0 640030.0 632640.0 683600.0 645890.0 854850.0 652220.0 True False 818017.9253521932 807784.3843004827 761366.804056464 828682.2428718098 690396.719727445 628691.4590941077 752704.9592930748 643649.5583418595 699630.7890148343 646441.8382194821 1.2654161240635187 1.2495855567229253 1.1777808289041498 1.2819130722638232 1.0679951063022615 0.9725414135102008 1.1643815650395974 0.9956805396672445 1.082279561208248 1.0 19.30216104789542 -5.810510114749788 6.917624499854687 1.0480177243647515 1.2392594195867612 0.7426066536832654 0.05668997923208921 0.10274770996366157 11.253428659102608 0.01682569742555442 0.019294948542276858 1.5469984738223841e-06 5.810510114749788 0.19124169522200973 GRLPNNS(ph)SRPSTPTINVLESK ddPTM_KYSE-520_SHP099_60min_R1 1 GRLPNNSSRPSTPTINVLESK 21 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 GRLPNNS(0.311)S(0.311)RPS(0.311)T(0.066)PT(0.001)INVLESK 84.94200000000001 0.0017319000000000002 498130000.0 274370.0 272880.0 265700.0 167820.0 242270.0 289710.0 218780.0 307710.0 335180.0 253780.0 True False 259150.149156965 259770.4351987694 282827.4471350309 183769.56234307733 261335.27067226195 287901.8124275322 240896.41748703748 306642.62583005417 274319.7612002017 251531.70663785227 1.0302881995313677 1.0327542347286618 1.1244206581965321 0.7306019777763572 1.0389754602529078 1.1445945176289227 0.9577178984988673 1.2191012812215716 1.0905971452543715 1.0 17.94038074375597 -5.997049903725946 24.996166856120194 1.0886901133190485 0.9800592497535444 0.14873244363472937 0.1155528125096304 173.45385704371571 1469646.6631162234 0.03611762523688678 0.040740976382367115 1.006815971422477e-06 5.997049903725946 -0.10863086356550411 GRLPNNSS(ph)RPST(ph)PTINVLESK ddPTM_KYSE-520_SHP099_60min_R1 1 GRLPNNSSRPSTPTINVLESK 21 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 2 GRLPNNS(0.169)S(0.825)RPS(0.205)T(0.738)PT(0.063)INVLESK 113.93 0.00035743 1114100000.0 1089200.0 1002800.0 1005500.0 814260.0 772150.0 711370.0 866720.0 815070.0 1009900.0 887440.0 True False 1028779.9047336313 954623.982766513 1070316.138856884 891647.0255838037 832913.8120674752 706930.0759606973 954336.5159720511 812242.7124087687 826527.6175072608 879577.9720178714 1.169629001023605 1.0853204754280918 1.216851914107664 1.013721414075712 0.9469471025481205 0.8037150752410313 1.0849936518790635 0.9234459459522087 0.9396865812943156 1.0 19.74645194850405 -5.45974682141232 4.120770457315904 0.947084833995668 1.149107676366859 0.6197960059043195 0.07241760145858159 0.1483438441539158 4.972055851401788 0.02085964484170084 0.030871788625417736 3.4693904491486176e-06 5.45974682141232 0.20202284237119106 GRLS(ph)GLGGPR ddPTM_KYSE-520_SHP099_60min_R1 2 GRLSGLGGPR 10 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GRLS(1)GLGGPR;GRLS(1)GLGGPR 120.84 0.00044597 0.0 154966.0 157122.0 174849.0 127452.0 126299.0 140794.0 127159.0 126563.0 166990.0 142782.0 True False 146369.72706293783 149573.6232750698 186120.04630829155 139564.99976015877 136238.01275699036 139915.25242111736 140013.472672247 126123.98249302634 136668.82547533142 141517.06256271515 1.0342903139193704 1.0569299600094815 1.3151774276392292 0.986206166470624 0.9626967256800902 0.9886811518512976 0.9893752042104336 0.8912280979343593 0.9657409714448025 1.0 17.110616482197766 -5.490098707826937 24.97355424503342 0.9641524189673386 1.131458928977502 0.5077005351150321 0.07522917622616611 517.5112691030232 394267.04411000386 0.021329131526680343 0.03160871403882125 3.235201178946178e-06 5.490098707826937 0.1673065100101635 GRLS(ph)KEDIER ddPTM_KYSE-520_SHP099_60min_R1 1 GRLSKEDIER 10 2 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PS65;E9PM13 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 1 GRLS(1)KEDIER 113.35 0.00039267 514260000.0 178050.0 162490.0 154310.0 148520.0 154270.0 175950.0 140320.0 166040.0 176420.0 152840.0 True False 168173.21156612458 154683.7364975377 164257.06950472968 162635.29614583362 166410.17132377057 174851.83078466155 154504.91499122904 165464.04599402743 144386.57518628653 151485.95650772055 1.110157109233776 1.021109415443762 1.0843055903756877 1.0735998233443167 1.0985188010829863 1.1542444911436405 1.0199289660448139 1.0922731704545463 0.9531350530101964 1.0 17.208824529417136 -7.757533324659696 24.994807721324307 0.9765675047602029 1.0804706471429366 0.5389204656483668 0.038907629979962256 69.4059354175191 444150.97429984814 0.028221208517180053 0.009762966140541163 1.7476991513105016e-08 7.757533324659696 0.10390314238273368 GRLS(ph)PVPVPR ddPTM_KYSE-520_SHP099_60min_R1 14 GRLSPVPVPR 10 1 Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9 Q9UKM9-2 RALY RNA-binding protein Raly 1 GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR;GRLS(1)PVPVPR 107.09 0.0014898 374267900000.0 51885740.0 46667980.0 49266360.0 38813370.0 43285700.0 45101550.0 41222670.0 44419290.0 54396010.0 44954520.0 True False 49007534.57054159 44425980.19073394 52442148.39456303 42502181.01513476 46692038.32805686 44820054.49687953 45389859.77808933 44265209.8505302 44519065.79582243 44556257.926887326 1.0999023897150069 0.997076106876678 1.1769872703541602 0.9538992499073168 1.0479344653375997 1.0059205279407681 1.018708973553611 0.9934678518821147 0.9991652770498383 1.0 25.40912473672295 -5.284002393494718 24.99968468466069 1.0051383723479699 1.0818973737340494 0.4304691542712413 0.04626114343346332 771.8010198238663 855148.960265369 0.012262301009431001 0.018203875773789877 5.1999313072634325e-06 5.284002393494718 0.0767590013860795 GRLSPVPVPR ddPTM_KYSE-520_SHP099_60min_R1 6 GRLSPVPVPR 10 1 Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9 Q9UKM9-2 RALY RNA-binding protein Raly 0 ;;;;; 115.7 0.00064988 2210910000.0 948190.0 796612.0 784799.0 703988.0 729506.0 771886.0 717600.0 793580.0 907660.0 745713.0 False True 895592.0105300968 758341.56378101 835388.3992627967 770894.807858289 786913.9718786438 767068.3731574259 790142.0111010972 790827.2562029652 742851.824246599 739106.5629759358 1.211722443546014 1.0260246651411489 1.1302678681395983 1.0430090144976676 1.064682701111754 1.0378319062259505 1.0690501893524968 1.0699773156103247 1.0050672818484838 1.0 19.495422858826608 GRLT(ph)PS(ph)PDIIVLS(ph)DNEAS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 GRLTPSPDIIVLSDNEASSPR 21 1 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 4 GRLT(1)PS(1)PDIIVLS(0.997)DNEAS(0.542)S(0.461)PR 149.37 5.516700000000001e-07 638710000.0 765270.0 689210.0 515750.0 588230.0 600760.0 563250.0 505310.0 609230.0 708630.0 560280.0 True False 722818.9475720768 656099.3170746998 548996.0702291767 644135.202342201 648036.3941431805 559734.5478230211 556391.666150356 607116.7233253515 579960.6551085947 555316.3550912436 1.301634538484484 1.1814874729682625 0.9886185868575247 1.1599427901531256 1.1669679601579572 1.007956172533495 1.001936393641667 1.0932808258917506 1.0443788478250415 1.0 19.08295036102297 -1.0000000002237857 0.721741277518581 1.0550892136283034 37.95897356182862 0.5802522821960477 0.0643714244439344 246.6862140219938 1.1965579796676418 0.025836009890431298 14742.016009068055 0.09999999994847145 1.0000000002237857 36.903884348200314 GRLT(ph)PS(ph)PDIIVLS(ph)DNEASS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 GRLTPSPDIIVLSDNEASSPR 21 1 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 4 GRLT(1)PS(1)PDIIVLS(0.869)DNEAS(0.363)S(0.768)PR;GRLT(1)PS(1)PDIIVLS(1)DNEAS(0.429)S(0.571)PR 159.13 3.8221e-09 682440000.0 334060.0 337950.0 330480.0 301050.0 296110.0 349700.0 283200.0 320530.0 353340.0 315440.0 True False 315529.02586790017 321714.37472670793 351783.2695866959 329661.7014860167 319412.1723645669 347517.39258537145 311828.61976565106 319418.1562422648 289182.36297654733 312645.4470086062 1.0092231596106198 1.0290070679258991 1.125182768380479 1.0544266824936108 1.021643447619995 1.1115383125211649 0.9973873688205903 1.0216625871205223 0.9249530602266758 1.0 18.25416798216744 -7.207007815341781 1.9379702765164928 0.9706399811799932 1.0574059287090176 0.3995965254668714 0.04235066604278978 0.3533856048156853 2.4936759510447466 0.029275997131312143 0.01245066000755855 6.208578614884188e-08 7.207007815341781 0.08676594752902445 GRLT(ph)PS(ph)PDIIVLS(ph)DNEASSPR ddPTM_KYSE-520_SHP099_60min_R1 4 GRLTPSPDIIVLSDNEASSPR 21 1 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 3 GRLT(1)PS(1)PDIIVLS(1)DNEASSPR;GRLT(1)PS(1)PDIIVLS(1)DNEASSPR;GRLT(1)PS(1)PDIIVLS(1)DNEASSPR;GRLT(1)PS(1)PDIIVLS(1)DNEASSPR 191.11 1.8495e-12 1147190000.0 1340970.0 1261580.0 1208390.0 1178270.0 1188580.0 1219260.0 1168810.0 1201740.0 1525520.0 1204970.0 True False 1266583.7209425787 1200971.8031298139 1286284.7528923608 1290252.426540206 1282114.4839048889 1211650.146078467 1286964.7212863348 1197571.444428224 1248524.0232297026 1194294.9032524752 1.060528448621221 1.0055906626237416 1.0770244010833216 1.0803465902989333 1.073532575926809 1.0145317900785873 1.0775937482287565 1.0027434942297966 1.0454068085106476 1.0 20.1877276897857 -7.725743881450599 0.7839558004957725 1.0030967232701737 1.0558991386076306 0.2576358145780916 0.028142456687196442 0.8587158875619927 1.1493714198764808 0.026854666285679153 0.010621146336865282 1.8804254421090117e-08 7.725743881450599 0.05280241533745689 GRLT(ph)PSPDIIVLS(ph)DNEAS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 GRLTPSPDIIVLSDNEASSPR 21 1 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 3 GRLT(0.999)PS(0.001)PDIIVLS(0.995)DNEAS(0.535)S(0.47)PR;GRLT(0.986)PS(0.014)PDIIVLS(0.994)DNEAS(0.612)S(0.394)PR 124.9 0.00033654 714800000.0 418800.0 411780.0 452210.0 385060.0 433290.0 410950.0 368710.0 393480.0 524110.0 422850.0 True False 395568.3291428983 391997.4707056189 481360.18016158266 421655.98662748985 467387.45791713556 408385.1086158379 405982.80506282917 392115.1097189224 428944.8357379247 419103.8779723224 0.9438431614059692 0.9353229385567899 1.148546232715536 1.0060894417572914 1.1152067124227416 0.9744245521937347 0.9686925518967406 0.9356036303362902 1.023480951341262 1.0 18.676948345238568 GRLT(ph)PSPDIIVLS(ph)DNEASS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 GRLTPSPDIIVLSDNEASSPR 21 1 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 3 GRLT(0.999)PS(0.001)PDIIVLS(1)DNEAS(0.103)S(0.897)PR;GRLT(0.997)PS(0.003)PDIIVLS(1)DNEAS(0.291)S(0.71)PR;GRLT(0.999)PS(0.001)PDIIVLS(1)DNEAS(0.291)S(0.709)PR 192.89 1.6515e-12 707090000.0 663720.0 657040.0 543230.0 555890.0 526100.0 581860.0 544890.0 561880.0 751080.0 542490.0 True False 626902.1285069818 625474.8121628528 578247.474998731 608721.6184655768 567501.0769004707 578228.3959099922 599972.7988139312 559930.9694237786 614702.8051860114 537683.960650834 1.1659304989275754 1.1632759351901687 1.0754411835138198 1.1321178666530354 1.0554547251391782 1.0754056996791974 1.1158465617752487 1.0413756228584834 1.1432418486910985 1.0 19.036398910464115 -1.0000000000000002 0.07760594153843665 0.9432421892077952 1.4920088128922129 0.4603714318449539 0.03889222831146101 192.16299001289974 1.0930576813975112 1.2077529528235889 11.349539214932793 0.09999999999999995 1.0000000000000002 0.5487666236844176 GRLT(ph)PSPDIIVLS(ph)DNEASSPR ddPTM_KYSE-520_SHP099_60min_R1 3 GRLTPSPDIIVLSDNEASSPR 21 1 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 2 GRLT(0.995)PS(0.005)PDIIVLS(0.999)DNEAS(0.001)SPR;GRLT(0.999)PS(0.001)PDIIVLS(1)DNEASSPR;GRLT(1)PSPDIIVLS(1)DNEASSPR 180.66 5.352999999999999e-10 1289080000.0 913820.0 931500.0 915520.0 794280.0 891860.0 806560.0 780830.0 824980.0 1054600.0 781520.0 True False 863128.582944993 886749.341789995 974535.8840837916 869768.1323910106 962044.308010747 801525.9598617599 859763.9165664301 822118.336931779 863111.2243025615 774596.3408133592 1.114294681586891 1.144788963060257 1.2581209498878956 1.1228663066981661 1.2419943876839894 1.034766003438802 1.1099509141285657 1.0613506591943356 1.1142722716663724 1.0 19.563085160539853 -6.271522044089441 24.998783775437886 1.0707700682582726 1.176220672583838 0.523427799428616 0.053408157817068626 598.8205606692663 1484700.4941303532 0.017993959469012586 0.016051158196675082 5.351529895768043e-07 6.271522044089441 0.10545060432556541 GRLT(ph)PSPDIIVLSDNEASSPR ddPTM_KYSE-520_SHP099_60min_R1 1 GRLTPSPDIIVLSDNEASSPR 21 1 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 GRLT(0.939)PS(0.061)PDIIVLSDNEASSPR 157.09 4.0679e-07 790970000.0 346600.0 421130.0 294590.0 272910.0 263040.0 373430.0 221150.0 320550.0 382970.0 315050.0 True False 327373.4070700295 400898.28267098236 313579.74276066583 298847.28434661677 283739.75150712766 371099.28485317476 243506.00021600892 319438.08686693216 313432.3018880634 312258.9021051911 1.0484037600303444 1.283865023441129 1.0042299535627963 0.9570496864359809 0.9086682544331238 1.1884346045902705 0.7798208428145268 1.0229911291986886 1.0037577784811305 1.0 18.25238317626185 -4.892237232212883 7.685679655923176 0.9786534835918547 1.1649677744612321 0.31085946195813197 0.10942995819063711 0.24334574730974684 15.684344321453764 0.027179717857356473 0.05709652509469805 1.2816303042445212e-05 4.892237232212883 0.18631429086937745 GRNS(ph)ATSADEQPHIGNYR ddPTM_KYSE-520_SHP099_60min_R1 3 GRNSATSADEQPHIGNYR 18 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;F5H4J8;F5H6N2;F5H4F6;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 GRNS(0.898)AT(0.088)S(0.014)ADEQPHIGNYR;GRNS(0.998)AT(0.002)SADEQPHIGNYR;GRNS(0.874)AT(0.04)S(0.085)ADEQPHIGNYR 204.81 1.8945e-13 2174640000.0 375150.0 332408.0 354000.0 371830.0 335772.0 309122.0 341409.0 325192.0 353492.0 375170.0 True False 354339.681657016 316438.6207254201 376819.4064200267 407168.61140523426 362195.34611865616 307192.6549350164 375921.9535507448 324063.9848523836 289306.7636081558 371846.2856778436 0.9529197824608774 0.850993092881323 1.0133741304773758 1.0949917401030405 0.9740458895761333 0.826128071643988 1.0109606254785404 0.8714998571564134 0.778027843093214 1.0 18.504346835769322 -6.1201007599757755 10.143624222938277 0.89647269695348 0.9793276703956008 0.17537331069912332 0.0866789140955289 0.7749683746155822 61.575004904633474 0.029842015705960245 0.02985382122411916 7.584015990606684e-07 6.1201007599757755 0.08285497344212078 GRNSAT(ph)SADEQPHIGNYR ddPTM_KYSE-520_SHP099_60min_R1 1 GRNSATSADEQPHIGNYR 18 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;F5H4J8;F5H6N2;F5H4F6;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 GRNS(0.269)AT(0.598)S(0.133)ADEQPHIGNYR 105.06 0.00016078 0.0 66511.0 72750.0 68008.0 50910.0 62910.0 53762.0 70166.0 56715.0 72253.0 63766.0 True False 62821.50224360861 69254.9808000237 72391.90449664729 55748.47109335039 67860.65909106375 53426.4514159987 77259.06403416888 56518.26890238051 59133.67654990798 63201.082849197286 0.9939940806632319 1.09578788333851 1.1454219015420988 0.8820809483022718 1.0737262089794344 0.8453407601176451 1.2224326000634362 0.8942610846911833 0.9356434080568768 1.0 15.94766165642942 -5.247942159115928 24.946761724607466 0.983175649476721 1.0801399404873717 0.14962658957451513 0.10818399735251538 1523.6841287735897 2816205.319550923 0.028238482484035446 0.04856813241360778 5.6501222013894106e-06 5.247942159115928 0.09696429101065074 GRPARPS(ph)PSPTGGR ddPTM_KYSE-520_SHP099_60min_R1 2 GRPARPSPSPTGGR 14 2 Q9Y6R9 Q9Y6R9 CCDC61 Coiled-coil domain-containing protein 61 1 GRPARPS(0.993)PS(0.007)PTGGR;GRPARPS(0.995)PS(0.005)PTGGR 66.673 0.032911 344480000.0 125003.0 82068.0 74921.0 151493.0 71756.0 97753.0 104672.0 147173.0 79795.0 48646.0 True False 118068.83440269744 78125.33009342053 79750.52753783838 165890.84917196867 77402.78896420874 97142.88726736588 115253.26726027597 146662.49121343656 65306.23946825616 48215.03428601532 2.448797064050685 1.6203520592762628 1.6540593347865746 3.440645674705763 1.6053662537093596 2.0147841582172634 2.3904010225645522 3.0418414792245776 1.3544787520186026 1.0 15.55719545355414 GRPGS(ph)GTSGVDSLSNFIESVK ddPTM_KYSE-520_SHP099_60min_R1 2 GRPGSGTSGVDSLSNFIESVK 21 1 Q8IXT5;B9ZVT1;E5RHG1;E5RJ83;E5RJV8 Q8IXT5 RBM12B RNA-binding protein 12B 1 GRPGS(0.667)GT(0.161)S(0.161)GVDS(0.011)LSNFIESVK;GRPGS(0.741)GT(0.129)S(0.129)GVDS(0.001)LSNFIESVK 172.74 1.7190999999999998e-09 706320000.0 580600.0 554210.0 464690.0 443020.0 505470.0 626460.0 539970.0 572160.0 679980.0 583150.0 True False 548392.9606025944 527584.9197138306 494644.66093028797 485124.48760117975 545247.6132691137 622550.030766462 594555.4371993586 570175.3105031485 556512.7729008681 577983.7446838351 0.9488034320110037 0.9128023487968968 0.8558106788987038 0.8393393275559149 0.943361501571937 1.0771064696758994 1.028671554637905 0.9864902183625287 0.9628519452658449 1.0 19.140669393125062 -6.011039390529652 8.496543385335894 1.0112660600449184 0.888728578966359 0.6822865714499895 0.03928817968185609 0.10078373478290174 57.14654222627437 0.013686336245081272 0.014519264314199613 9.749012101222774e-07 6.011039390529652 -0.12253748107855933 GRPGSGT(ph)S(ph)GVDSLSNFIESVK ddPTM_KYSE-520_SHP099_60min_R1 1 GRPGSGTSGVDSLSNFIESVK 21 1 Q8IXT5;B9ZVT1;E5RHG1;E5RJ83;E5RJV8 Q8IXT5 RBM12B RNA-binding protein 12B 2 GRPGS(0.564)GT(0.727)S(0.694)GVDS(0.011)LS(0.004)NFIESVK 64.68 0.008995 0.0 58687.0 64216.0 56042.0 53408.0 50009.0 52767.0 52339.0 59080.0 61840.0 55388.0 True False 55431.51512036595 61130.96696981889 59654.5569903704 58483.88026229928 53944.423787712694 52437.66158007517 57629.9368994152 58875.06526937564 50611.41485953953 54897.30541121192 1.0097310734133942 1.1135513211789414 1.0866572875211993 1.0653324388915244 0.982642470038163 0.9551955453421143 1.0497771514964955 1.0724581986013346 0.9219289449715493 1.0 15.744447717026064 -5.697888576454935 6.430192766630339 1.0012491605915648 1.0741252808796633 0.3556048544646653 0.046999283912317696 0.24251153292098845 18.72055017599999 0.014175199752298624 0.018234920091039872 2.004986365083048e-06 5.697888576454935 0.07287612028809853 GRPPAEKLS(ph)PNPPK ddPTM_KYSE-520_SHP099_60min_R1 2 GRPPAEKLSPNPPK 14 2 P51531;P51531-2;F6VDE0;A0A0U1RQZ9;A0A0U1RRJ4;B1ALF6;B4DNT1;A0A1W2PS06;A0A0U1RRG6;A0A0U1RR26;B1ALG2;F6T8Q0;A0A0U1RQX3;B1ALG1;A0A0U1RRN2;A0A0U1RQW7;F6XE55;A0A0U1RR09;A0A0U1RQU0;F6UH26;A0A0A0MSS5;A0A0U1RRF8;A0A0U1RRD6;A0A0U1RR83 P51531 SMARCA2 Probable global transcription activator SNF2L2 1 GRPPAEKLS(1)PNPPK;GRPPAEKLS(1)PNPPK 82.70700000000001 0.0038119 1862860000.0 1829690.0 1581060.0 1501160.0 1573120.0 1542500.0 1524860.0 1396920.0 1524390.0 1814090.0 1520870.0 True False 1728193.4483034117 1505103.504380556 1597927.1755409213 1722628.8518242252 1663885.974375548 1515342.7831219032 1538134.306225399 1519102.2468852992 1484696.9854874182 1507396.2750189556 1.1464758650021738 0.9984789861323157 1.0600577976888177 1.1427843363899537 1.1038145721533144 1.0052716782140434 1.0203914735068964 1.007765689792617 0.9849413920495114 1.0 20.523627302020554 -6.269262738337763 24.190326575490943 1.0052042336406866 1.0864530999389128 0.5357717375009798 0.04023481507265234 350.34247746450905 1083278.8948656297 0.014653372159304422 0.013171296530789751 5.379442399564587e-07 6.269262738337763 0.08124886629822625 GRPPAEKLS(ph)PNPPNLTK ddPTM_KYSE-520_SHP099_60min_R1 3 GRPPAEKLSPNPPNLTK 17 2 P51532-5;A0A2R8YF58;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4P4;A0A2R8Y7F3;Q9HBD4;A0A2R8YF80;A0A2R8Y6N0;A0A2R8Y526;A0A2R8Y7Y7;A0A2R8Y7S2;A0A2R8YGG3;A0A0A0MT49;A0A2R8YDA1;A0A2R8Y6V2;A0A2R8Y4C5;P51532-2;P51532-3;P51532-4;P51532;K7EP28;A0A2R8Y5K3;K7EQF0;A0A2R8Y523;A0A2R8YFK5;A0A2R8YF38 P51532-5 SMARCA4 Transcription activator BRG1 1 GRPPAEKLS(1)PNPPNLTK;GRPPAEKLS(1)PNPPNLTK;GRPPAEKLS(1)PNPPNLTK 139.28 9.4342e-06 21822900000.0 4280090.0 4043760.0 3906470.0 3676430.0 3597860.0 4081360.0 3919660.0 4221240.0 4848760.0 4061210.0 True False 4042664.875552112 3849491.6997924903 4158287.3067729915 4025836.8018410173 3880991.112976866 4055886.7183363764 4315897.48499516 4206597.503684825 3968347.4112927066 4025230.8389735646 1.0043311892599414 0.9563406059897206 1.0330556117455754 1.0001505411470035 0.9641660983513979 1.0076159307600427 1.0722111743771983 1.0450574568184292 0.9858682818560132 1.0 21.94064009061178 -6.529658348519449 24.997706222654664 1.0310210964779785 0.9917730438605875 0.21942448217374466 0.02973965030997526 234.6315386948441 865122.7241541464 0.011329441023063233 0.008796780847097315 2.9535318021247176e-07 6.529658348519449 -0.03924805261739095 GRPS(ph)KTPS(ph)PSQPK ddPTM_KYSE-520_SHP099_60min_R1 2 GRPSKTPSPSQPK 13 2 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 GRPS(0.798)KT(0.207)PS(0.995)PS(0.001)QPK;GRPS(0.5)KT(0.5)PS(0.999)PSQPK 120.77 5.6678e-05 4203780000.0 3610390.0 3514120.0 3061200.0 3070780.0 3295780.0 3457780.0 3088070.0 3271920.0 3566820.0 3300250.0 True False 3410114.4695659704 3345296.400398343 3258529.85009318 3362626.007936326 3555139.135576955 3436198.712421634 3400242.252258877 3260570.4731918713 2919175.400215119 3271012.352555645 1.042525708257153 1.0227098035214264 0.996183902377283 1.0280077375156051 1.086862033033694 1.05050007216785 1.039507615922717 0.9968077530017226 0.8924379016589052 1.0 21.641305776906627 -7.532368256361748 5.487701765309049 0.9444923175256333 1.0367627259900665 0.561844785957851 0.032387220148515 0.1179923987805746 11.94134129555928 0.02185336092561263 0.008541085784342874 2.9351597523829988e-08 7.532368256361748 0.09227040846443313 GRPS(ph)KTPSPS(ph)QPK ddPTM_KYSE-520_SHP099_60min_R1 1 GRPSKTPSPSQPK 13 2 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 GRPS(0.615)KT(0.394)PS(0.513)PS(0.479)QPK 140.03 6.283e-05 999350000.0 1679900.0 1585400.0 1523400.0 1593900.0 1606100.0 1510200.0 1630500.0 1652300.0 1858200.0 1614300.0 True False 1586712.5982023736 1509235.0042660825 1621600.80152618 1745383.7767764889 1732490.9325410482 1500774.281619753 1795326.852146518 1646568.55694972 1520797.721410033 1599998.5579063955 0.9916962677007618 0.9432727278460317 1.013501414431305 1.0908658436919658 1.08280780878204 0.9379847714259956 1.1220802939320835 1.0291062756358116 0.9504994325744911 1.0 20.60963917412292 -4.940463337256442 6.331019893797707 1.0351894943691766 0.9688548344599571 0.15805672481175737 0.05657167634510714 0.3329213495491059 26.380448868856494 0.014795640838217267 0.031224431356076658 1.1469293400632455e-05 4.940463337256442 -0.0663346599092195 GRPS(ph)LTGENLEAK ddPTM_KYSE-520_SHP099_60min_R1 1 GRPSLTGENLEAK 13 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 GRPS(0.999)LT(0.001)GENLEAK 216.6 1.7869e-11 416110000.0 744480.0 607550.0 543410.0 432420.0 423840.0 524410.0 491790.0 506150.0 692970.0 564590.0 True False 703182.210315914 578362.3860488586 578439.0780867423 473517.0667881868 457193.79668028076 521136.962669987 541504.9326078725 504394.2837862984 567144.1163521197 559588.1718443736 1.2566066362665635 1.033550055467767 1.0336871063236328 0.8461884839836752 0.8170183354186951 0.9312865941257239 0.9676847364787936 0.9013669501337761 1.0135026880265217 1.0 19.09400594265461 -4.2285119651046355 1.3408609802175446 0.9229167588748023 1.4106122597525566 0.6977725820722933 0.06433741086207426 0.8037997672225689 1.2113131904248393 0.019662555173676856 0.5457356299958225 5.908646866316111e-05 4.2285119651046355 0.48769550087775426 GRPS(ph)SPRT(ph)PLYLQPDAYGSLDR ddPTM_KYSE-520_SHP099_60min_R1 3 GRPSSPRTPLYLQPDAYGSLDR 22 2 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 2 GRPS(0.56)S(0.461)PRT(0.903)PLY(0.054)LQPDAY(0.003)GS(0.018)LDR;GRPS(0.926)S(0.082)PRT(0.992)PLY(0.001)LQPDAYGSLDR;GRPS(0.84)S(0.166)PRT(0.991)PLY(0.003)LQPDAYGSLDR 153.12 9.326000000000001e-07 1369250000.0 457700.0 447500.0 508297.0 466030.0 427718.0 344693.0 383062.0 393792.0 549830.0 447680.0 True False 432310.4685976702 426001.4282888056 541062.6379239553 510321.3510829715 461376.9732174788 342541.6431296234 421785.6452848505 392426.02746374375 449994.73208636127 443713.9034897691 0.9743000280081108 0.9600813157720403 1.2193952762546933 1.1501135012208112 1.0398073388929021 0.7719876263411284 0.9505801868445978 0.8844122854329087 1.0141551313745052 1.0 18.759270234224378 -6.02018483521788 23.95493983512493 0.9172329262649587 1.0800667514141329 0.37186227853332887 0.09456840026137094 475.72673264919837 564582.1923898332 0.03222890792804576 0.03266890675037623 9.545862287849596e-07 6.02018483521788 0.16283382514917422 GRPSKT(ph)PS(ph)PSQPK ddPTM_KYSE-520_SHP099_60min_R1 7 GRPSKTPSPSQPK 13 2 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 GRPS(0.292)KT(0.708)PS(0.708)PS(0.292)QPK;GRPS(0.004)KT(0.996)PS(0.943)PS(0.057)QPK;GRPS(0.372)KT(0.628)PS(1)PSQPK;GRPS(0.005)KT(0.995)PS(0.781)PS(0.219)QPK;GRPS(0.177)KT(0.823)PS(0.961)PS(0.039)QPK;GRPS(0.01)KT(0.99)PS(0.959)PS(0.041)QPK;GRPS(0.159)KT(0.841)PS(0.805)PS(0.195)QPK 159.31 4.6129e-06 28107280000.0 12945590.0 12493630.0 11091120.0 11507470.0 11058220.0 11197580.0 11314630.0 11310140.0 13730290.0 11247960.0 True False 12227472.31630614 11893417.261479052 11806071.341619434 12601136.488952996 11928439.001334958 11127691.749688586 12458423.220547413 11270907.764146524 11237215.448444165 11148311.825180473 1.0968003504071522 1.0668357189844317 1.0590008179492516 1.1303179070118095 1.069977157832312 0.9981503858328297 1.1175165725457927 1.0109968164587166 1.0079746265316052 1.0 23.41032192540331 -7.3570041981449315 0.7741330159753649 0.993495324962108 1.0815869972232555 0.4107310689989847 0.03609337957417776 0.6536281800194905 0.7494664951547491 0.0337727886091057 0.014941035448036101 4.3953736659156175e-08 7.3570041981449315 0.08809167226114745 GRPSKT(ph)PSPS(ph)QPK ddPTM_KYSE-520_SHP099_60min_R1 2 GRPSKTPSPSQPK 13 2 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 2 GRPS(0.015)KT(0.985)PS(0.028)PS(0.973)QPK;GRPS(0.022)KT(0.977)PS(0.363)PS(0.638)QPK 161.24 2.9585e-06 1681210000.0 2911600.0 2457300.0 2525000.0 2470900.0 2444800.0 2573400.0 2393000.0 2574000.0 3040800.0 2618000.0 True False 2750087.7438693 2339247.6195175024 2687765.540142846 2705733.5930968295 2637191.850990821 2557338.456045736 2634907.7934293877 2565071.394776115 2488667.37233001 2594806.5567731764 1.059843068721557 0.9015113721720052 1.0358250148270283 1.0427496362047113 1.0163346643729596 0.9855603491406179 1.0154544224314277 0.9885405091491526 0.959095530968922 1.0 21.30719555877959 -1.530574329189533 4.0047706460376205 1.0000199908317882 1.000021186508765 0.0 0.043486357331073394 0.0 0.0 0.00963062733719712 0.0 0.0294730900361257 1.530574329189533 1.195676976761817e-06 GRPSS(ph)PRT(ph)PLYLQPDAYGSLDR ddPTM_KYSE-520_SHP099_60min_R1 1 GRPSSPRTPLYLQPDAYGSLDR 22 2 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 2 GRPS(0.46)S(0.543)PRT(0.997)PLYLQPDAYGSLDR 121.3 0.00029872 364230000.0 128550.0 136070.0 140180.0 160070.0 158810.0 133020.0 120340.0 140310.0 200420.0 155670.0 True False 121419.07524192813 129532.99295476597 149216.2270959301 175283.00467319984 171307.44349470414 132189.77283873642 132505.1416052203 139823.29735860034 164028.78017705213 154290.88490942732 0.7869491144159567 0.8395375594015495 0.9671098016161087 1.1360554758377037 1.1102888132067295 0.8567568519445279 0.8588008402635333 0.906231741691547 1.0631138726914504 1.0 17.23529330831953 -4.714964001937859 3.742533632386209 0.9853203748264039 0.8005836969643568 0.3729195431558827 0.09151305892933904 0.2649684587793727 7.524359189096294 0.027228255624346553 0.07808676116856823 1.927684689656622e-05 4.714964001937859 -0.18473667786204706 GRPVS(ph)PQSR ddPTM_KYSE-520_SHP099_60min_R1 2 GRPVSPQSR 9 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GRPVS(0.996)PQS(0.004)R;GRPVS(0.989)PQS(0.011)R 89.663 0.0027586999999999998 380870000.0 175815.0 191454.0 163528.0 162201.0 203754.0 199841.0 114591.0 122653.0 184082.0 152980.0 True False 166062.19147148656 182256.26246168712 174069.27653405096 177616.5342724911 219788.2805983245 198593.71819174473 126174.9765803872 122227.54537042549 150657.3491295885 151624.71621663886 1.0952184816241943 1.2020221175634875 1.1480270557297776 1.1714220392585306 1.4495544399522218 1.3097714089568178 0.8321530930360358 0.8061188730984256 0.9936199907825831 1.0 17.210145419612896 -6.763314737915233 24.999982807112843 0.8918161837179139 1.2317760287125554 0.6789873513681384 0.1080148307607439 30.24512434894094 403179.5510838957 0.04689990788616078 0.033446683154130345 1.7245876116764842e-07 6.763314737915233 0.3399598449946415 GRPYDYNGPR ddPTM_KYSE-520_SHP099_60min_R1 4 GRPYDYNGPR 10 1 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 ;;; 112.83 0.00070038 4032350000.0 2160430.0 1985570.0 1637020.0 1498350.0 2117710.0 2029510.0 1743410.0 1706940.0 1856430.0 1607980.0 False True 2040586.641189566 1890180.2367986685 1742544.9285246078 1640752.7335046474 2284361.7288783453 2016843.0752814885 1919650.896841926 1701019.0235427911 1519349.1087919637 1593734.548189509 1.2803805022032582 1.1860069413353205 1.0933721243002157 1.0295018925005743 1.4333389029392583 1.2654824340556796 1.2044985151527647 1.0673164018908656 0.9533263306100457 1.0 20.603979923933515 -7.420857773513246 2.8853922067081066 0.9799453682834527 1.2115495217891785 0.4706729041799972 0.10304743475819854 0.2713111054949168 4.250506850905095 0.07864797225385389 0.030505741484761466 3.794392266453592e-08 7.420857773513246 0.23160415350572583 GRRPS(ph)GPDGAAR ddPTM_KYSE-520_SHP099_60min_R1 4 GRRPSGPDGAAR 12 2 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C528 E7EX82 PHC3 Polyhomeotic-like protein 3 1 GRRPS(1)GPDGAAR;GRRPS(1)GPDGAAR;GRRPS(1)GPDGAAR;GRRPS(1)GPDGAAR 102.29 0.0008675000000000001 1217140000.0 481852.0 515222.0 565562.0 391978.0 451044.0 453676.0 426710.0 428850.0 655852.0 428694.0 True False 455122.70901185187 490469.96175601095 602019.0314511951 429231.4712675175 486538.59671069385 450844.4398014329 469846.0110882801 427362.41944434284 536765.8094834851 424896.1046788856 1.0711388125240875 1.1543291556571993 1.4168617335434737 1.0102033568698126 1.145076623092119 1.0610698352769266 1.1057903471328958 1.0058045125344728 1.2632871979119338 1.0 18.69675059194959 GRRS(ph)S(ph)DTEEESR ddPTM_KYSE-520_SHP099_60min_R1 1 GRRSSDTEEESR 12 2 C9J8Q2;C9JVB3;F8WDM0;C9J367;C9J713;Q96IZ7-2;Q96IZ7 C9J8Q2 RSRC1 Serine/Arginine-related protein 53 2 GRRS(0.985)S(0.955)DT(0.06)EEESR 62.357 0.035202 223770000.0 344360.0 326820.0 293080.0 269490.0 295730.0 332740.0 264550.0 285200.0 396210.0 298390.0 True False 325257.66433535883 311119.07663317915 311972.40574458 295102.24857487704 319002.2685264709 330663.2462363641 291293.295759191 284210.70776618033 324268.251641303 295746.496743907 1.0997853496706207 1.0519789078096287 1.0548642475204817 0.9978216202858767 1.0786341411939078 1.1180631043034543 0.9849425063906264 0.9609943343210056 1.0964398740523158 1.0 18.174001553703054 -1.000000000012007 0.1290550054507862 0.9915178339343326 1.2783236352648224 0.14233416204608285 0.04827600668428191 181.3251375639513 1.5893937674949337 0.2782550990481366 9.452087278229325 0.09999999999723527 1.000000000012007 0.28680580133048983 GRS(ph)ECDS(ph)S(ph)PEPK ddPTM_KYSE-520_SHP099_60min_R1 2 GRSECDSSPEPK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 GRS(1)ECDS(1)S(1)PEPK;GRS(1)ECDS(1)S(1)PEPK 124.2 0.00091958 953300000.0 1803260.0 1680000.0 1515280.0 1634950.0 1630610.0 1644920.0 1560710.0 1747450.0 2046140.0 1668270.0 True False 1703229.5730903111 1599290.27826859 1612957.3733337237 1790335.1564343574 1758929.7300982266 1634653.4441279054 1718481.7978617526 1741388.5038078951 1674612.5549918853 1653490.4256944207 1.030081303540056 0.9672207673031623 0.9754863700866764 1.0827611267736648 1.0637677139010493 0.9886077468161908 1.0393055630425179 1.0531591092077595 1.0127742676759643 1.0 20.65708326115307 -5.230790755721724 24.981317451666836 1.0360819562169308 0.9885586025995029 0.28783661765334223 0.03113960008266688 825.0458692706502 672483.7745519341 0.008514237318315403 0.014744413741746858 5.877724747179666e-06 5.230790755721724 -0.04752335361742788 GRS(ph)FAGNLNTYK ddPTM_KYSE-520_SHP099_60min_R1 1 GRSFAGNLNTYK 12 1 Q01813-2;Q01813;B1APP6 Q01813-2 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 GRS(1)FAGNLNTYK 94.569 0.0022421999999999997 0.0 132520.0 152070.0 160800.0 127460.0 170840.0 127520.0 128510.0 150370.0 178140.0 143910.0 True False 125168.85142792937 144764.32893827636 171165.42528909654 139573.76007775348 184284.13605336737 126724.1003788579 141501.04493673658 149848.4015666218 145794.2665439583 142635.06936028594 0.8775461181412675 1.014928022873618 1.2000234308208242 0.9785374712105351 1.2919973810078844 0.8884498107457846 0.9920494698208833 1.0505719402576619 1.0221488109329724 1.0 17.12196921198227 GRS(ph)IDQDYER ddPTM_KYSE-520_SHP099_60min_R1 6 GRSIDQDYER 10 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 GRS(1)IDQDYER;GRS(1)IDQDYER;GRS(1)IDQDYER;GRS(1)IDQDYER;GRS(1)IDQDYER;GRS(1)IDQDYER 192.71 4.3534e-06 7494923000.0 6329405.0 5486044.0 5373227.0 4817188.0 5181187.0 5253948.0 4539888.0 5009244.0 6735199.0 5087667.0 True False 5978300.287293953 5222486.211520069 5719593.809887172 5275012.099179617 5588916.939978562 5221156.161678941 4998824.184077125 4991868.101730338 5512256.642149993 5042594.228525033 1.1855604509035849 1.0356744911136058 1.134256208348567 1.0460909325878014 1.1083415969429151 1.0354107281017806 0.9913199352427945 0.9899404702230954 1.0931390455666976 1.0 22.26573470736035 -6.364203796976726 4.2383096152813 1.017291931948219 1.0969869126390928 0.40785133422973086 0.048234768587773855 0.24194424076227686 7.482616253948013 0.016679168151851942 0.014605572767998766 4.3231091725966687e-07 6.364203796976726 0.07969498069087377 GRS(ph)KDRDPNR ddPTM_KYSE-520_SHP099_60min_R1 5 GRSKDRDPNR 10 3 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 GRS(1)KDRDPNR;GRS(1)KDRDPNR;GRS(1)KDRDPNR;GRS(1)KDRDPNR;GRS(1)KDRDPNR 97.551 0.0032523000000000005 15453300000.0 6766780.0 8463050.0 4533900.0 3920721.0 8692050.0 9801250.0 3949610.0 4534580.0 7200000.0 9778570.0 True False 6391413.224158504 8056472.374702971 4826162.448496489 4293345.145032244 9376064.884000637 9740076.763160923 4348875.123279 4518850.600358929 5892661.4972297 9691939.47741233 0.6594565761635317 0.831254919975417 0.4979563130521153 0.44298101066748846 0.9674085260078379 1.0049667340433543 0.4487105118035791 0.4662483304699118 0.6079961096499741 1.0 23.208353965043095 GRS(ph)PPERPVPGTPK ddPTM_KYSE-520_SHP099_60min_R1 6 GRSPPERPVPGTPK 14 2 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 GRS(1)PPERPVPGTPK;GRS(0.888)PPERPVPGT(0.112)PK;GRS(1)PPERPVPGTPK;GRS(1)PPERPVPGTPK;GRS(1)PPERPVPGTPK;GRS(1)PPERPVPGTPK 139.39 4.6935e-06 53158700000.0 8470730.0 7793720.0 7607690.0 7413280.0 7527860.0 7548290.0 7518990.0 7230700.0 8549770.0 7290800.0 True False 8000841.720918383 7419297.992587783 8098093.870134371 8117835.902316097 8120259.754335629 7501178.32221399 8279082.887470804 7205618.389358064 6997347.290162431 7226209.184156568 1.1071976353051327 1.0267206225989918 1.120655887998566 1.1233878919689202 1.123723317080173 1.0380516438218106 1.1457020792620642 0.9971505398925278 0.9683289137967503 1.0 22.784807587805737 -7.360562662698942 6.408957440727656 0.9844981637299469 1.0955670403341704 0.6514025087464906 0.03668884130511722 0.1520001643108399 8.28571699491236 0.02023904542576804 0.00955882232402003 4.359506577999973e-08 7.360562662698942 0.11106887660422349 GRS(ph)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK ddPTM_KYSE-520_SHP099_60min_R1 25 GRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFK 32 1 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 GRS(0.999)PQPPAEEDEDDFDDT(0.001)LVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(0.996)PQPPAEEDEDDFDDT(0.004)LVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK;GRS(0.999)PQPPAEEDEDDFDDT(0.001)LVAIDTYNCDLHFK 357.09 2.6063999999999994e-97 45010168000.0 3030708.1 3409890.0 3088086.0 2688921.0 3115689.0 2808389.1 2743722.0 2913395.0 3856726.0 2524491.0 True False 2862588.6801261897 3246073.7660507616 3287148.9646722944 2944475.243386422 3360875.9984545726 2790860.901907856 3021084.1959062545 2903289.1127365073 3156441.7785506533 2502125.973764276 1.1440625732443128 1.2973262737716067 1.3137423931245977 1.176789368025568 1.343208149267707 1.115395839846224 1.2074069121952486 1.1603289135633363 1.2615039417068215 1.0 21.254722995578458 -6.277186257638055 24.951810670890307 1.1626026678027304 1.2562913564181502 0.27441699038672096 0.08480392315932918 1189.5168130289906 1884850.8391217785 0.0282626392103187 0.02500545685381086 5.282186639064215e-07 6.277186257638055 0.09368868861541979 GRS(ph)PS(ph)PIGVGSEMCR ddPTM_KYSE-520_SHP099_60min_R1 2 GRSPSPIGVGSEMCR 15 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 2 GRS(1)PS(1)PIGVGSEMCR;GRS(1)PS(0.999)PIGVGS(0.001)EMCR 96.016 0.0024706 436560000.0 434100.0 400960.0 366300.0 339740.0 372910.0 419400.0 350790.0 394740.0 444890.0 384960.0 True False 410019.60764310387 381697.27974676975 389912.2841007224 372028.78745344473 402255.89543234115 416782.3690314696 386251.2765804822 393370.73907300824 364109.19076423935 381549.5538943477 1.0746169231707177 1.0003871734376684 1.0219178088953824 0.9750471037281325 1.0542690754756514 1.092341387317879 1.0123227052374866 1.0309820442928204 0.9542906997214374 1.0 18.5415109142357 -7.745097173662448 24.37384772560363 0.9771453681849901 1.031397945138903 0.2957325615908175 0.03426476213909975 201.95315699037974 301209.980547203 0.02394488880054985 0.008986033540348286 1.798468461660669e-08 7.745097173662448 0.054252576953912945 GRS(ph)PS(ph)PKPR ddPTM_KYSE-520_SHP099_60min_R1 1 GRSPSPKPR 9 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GRS(1)PS(1)PKPR 89.805 0.046701 224880000.0 806320.0 669310.0 635220.0 712810.0 694510.0 732760.0 705390.0 680210.0 788730.0 684050.0 True False 761591.8222409302 637155.342945208 676167.2975879356 780555.2480858591 749163.9857786472 728186.573036479 776697.7051429824 677850.5102722069 645516.5142652752 677989.8491828467 1.123308591063488 0.9397712129660128 0.9973118305574814 1.1512786644617619 1.1049781743511113 1.0740375743296633 1.1455889879164183 0.9997944823055864 0.9521035086930721 1.0 19.370904148029705 -7.496969195500491 18.66267301512919 0.9760171108880025 1.072199771369493 0.315517188808632 0.0629459508045355 38.48976013519163 27727.097162667607 0.037231070117757024 0.01764656777230017 3.184423384807143e-08 7.496969195500491 0.0961826604814906 GRS(ph)RT(ph)PPTSR ddPTM_KYSE-520_SHP099_60min_R1 2 GRSRTPPTSR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GRS(0.995)RT(0.983)PPT(0.014)S(0.007)R;GRS(0.918)RT(0.926)PPT(0.036)S(0.12)R 71.506 0.034851 9567680000.0 4358400.0 4144290.0 4108050.0 3529590.0 3543500.0 3752730.0 3509300.0 3430350.0 4535160.0 3386720.0 True False 4116630.8637450007 3945192.087693888 4372861.476112405 3865041.172390068 3822353.2902429574 3729307.8200654895 3864054.2914675055 3418450.9164997125 3711689.2660800377 3356716.2956282883 1.2263862957695912 1.1753129368818025 1.3027200069924054 1.1514351622220236 1.1387180070061638 1.1109988130133177 1.151141160335761 1.018391372828209 1.1057500661923851 1.0 21.678619177200773 -6.497830728155525 0.3995748414494511 1.0059376064798224 1.2555650964383698 0.6993479547833621 0.0464648684561768 0.7495724619017002 0.2644083691586092 0.0496336794685124 0.06958587608757895 3.178112539403468e-07 6.497830728155525 0.24962748995854733 GRSDS(ph)VDYGQTHYYHQR ddPTM_KYSE-520_SHP099_60min_R1 2 GRSDSVDYGQTHYYHQR 17 1 Q9UPU9-2;Q9UPU9-3;Q9UPU9 Q9UPU9-2 SAMD4A Protein Smaug homolog 1 1 GRS(0.034)DS(0.966)VDYGQTHYYHQR;GRS(0.002)DS(0.998)VDYGQTHYYHQR 190.37 1.7024e-12 993780000.0 257640.0 323100.0 295900.0 209039.0 207884.0 274480.0 250836.0 193800.0 312720.0 195489.0 True False 243348.19560739328 307577.7910170123 314974.1874567397 228906.00371013276 224243.28810183922 272766.86850681365 276192.95080344897 193127.75303326003 255937.93102967675 193757.11954814076 1.2559445359990045 1.587439944061471 1.6256134907005646 1.1814069296857963 1.157342185024194 1.4077772684840217 1.4254596241291988 0.9967517760568052 1.3209214279534465 1.0 17.5638897972009 -7.157515651180623 0.20573236433950726 0.9143663570847443 1.5825450148610136 0.33162646025236453 0.1704303016633266 3.401719239383654 0.6680243878768685 0.7510087604293894 0.9280558029628488 6.957998788908314e-08 7.157515651180623 0.6681786577762693 GRSECDS(ph)S(ph)PEPK ddPTM_KYSE-520_SHP099_60min_R1 2 GRSECDSSPEPK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 GRS(0.054)ECDS(0.953)S(0.993)PEPK;GRS(0.001)ECDS(0.999)S(1)PEPK 145.43 8.7779e-05 766970000.0 1824510.0 1709430.0 1668370.0 1483710.0 1679240.0 1637300.0 1484560.0 1450150.0 2077930.0 1606110.0 True False 1723300.793229488 1627306.4168932596 1775915.7996863844 1624721.3523063215 1811386.6344313766 1627081.0033744033 1634633.8127093744 1445119.768117554 1700630.2923525723 1591881.1149346707 1.0825562141933007 1.022253735926783 1.115608309581125 1.020629830370843 1.1378906486403755 1.022112133946119 1.026856715224276 0.9078063396567528 1.068314886330167 1.0 20.60230116569658 -6.649851262950837 2.7220500614229204 0.9908659652056974 1.0720779822621893 0.31722674494890635 0.05104932151657606 0.2995129808696143 4.494141217151899 0.02066306507160648 0.015000425712916756 2.2394879864469493e-07 6.649851262950837 0.08121201705649195 GRSECDS(ph)SPEPK ddPTM_KYSE-520_SHP099_60min_R1 1 GRSECDSSPEPK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GRSECDS(0.959)S(0.041)PEPK 95.236 0.0025835999999999997 311270000.0 1544900.0 1578200.0 1810900.0 1199300.0 1400900.0 1457000.0 1131500.0 1171900.0 1628700.0 1438300.0 True False 1459201.3173182006 1502380.9030735032 1927633.5115424453 1313281.1114173054 1511142.8599693389 1447906.3225532933 1245883.0623758272 1167834.9524235174 1332969.1361858363 1425557.7809804685 1.0236002614461497 1.053889869016882 1.3521959876061003 0.921240183273426 1.060036204867127 1.0156770506751778 0.8739618127010854 0.8192126394345834 0.9350509351287384 1.0 20.443095085376306 -6.22068633818372 1.1898635834412672 0.8946309346797616 1.1118442580883205 0.3504902537374115 0.11110131976404464 0.492059703607411 1.4374112269365946 0.0561311316157492 0.05246919644385839 6.01608081838731e-07 6.22068633818372 0.21721332340855892 GRSECDSS(ph)PEPK ddPTM_KYSE-520_SHP099_60min_R1 1 GRSECDSSPEPK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 GRSECDS(0.214)S(0.786)PEPK 58.824 0.03573 394300000.0 818420.0 850020.0 938430.0 636960.0 699790.0 761770.0 572300.0 595400.0 849030.0 717360.0 True False 773020.6111201772 809183.7632939678 998922.6993410876 697496.4868909932 754859.4917395571 757015.510865766 630153.6691097522 593334.6963674042 694867.5543045738 711004.7484976343 1.0872228529465993 1.1380848932497112 1.4049451870073006 0.9810011654138959 1.061679958304904 1.0647123137578944 0.8862861611561359 0.8345017352150333 0.9773036759217731 1.0 19.439499669458876 -6.0207032506395315 1.1054523145683353 0.9193481111715838 1.1876995048230021 0.4681695264818829 0.10837846238911272 0.42234831174453574 1.0939852208728271 0.05325654743597212 0.06067132602614283 9.53447423211797e-07 6.0207032506395315 0.26835139365141836 GRSS(ph)ESSCGVDGDYEDAELNPR ddPTM_KYSE-520_SHP099_60min_R1 1 GRSSESSCGVDGDYEDAELNPR 22 1 P11274;P11274-2 P11274 BCR Breakpoint cluster region protein 1 GRS(0.144)S(0.703)ES(0.144)S(0.01)CGVDGDYEDAELNPR 71.309 0.0065751 432250000.0 491400.0 412850.0 442090.0 343390.0 527330.0 452830.0 367230.0 402440.0 516120.0 421710.0 True False 464141.06241838617 393016.0662995166 470587.82876900997 376025.68235603155 568827.8709027279 450003.7200012404 404353.1922194208 401044.0295702022 422405.6183264153 417973.97748541564 1.1104544479317051 0.9402883611653314 1.1258782941467456 0.8996389790059411 1.3609169506792467 1.076630948913422 0.9674123605781891 0.9594952106419014 1.0106026716487495 1.0 18.673053599227675 -6.739377957741583 8.930656860045632 0.9809814040894227 1.0850476955320048 0.1532748458909452 0.11648974956206336 0.4545801705864955 164.0737122840195 0.04540718626492748 0.0344176702079731 1.822309093117498e-07 6.739377957741583 0.10406629144258206 GRST(ph)DEY(ph)S(ph)EADEEEEEEEGKPSR ddPTM_KYSE-520_SHP099_60min_R1 1 GRSTDEYSEADEEEEEEEGKPSR 23 2 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 3 GRS(0.138)T(0.873)DEY(0.996)S(0.993)EADEEEEEEEGKPSR 131.5 4.0366e-07 787140000.0 618980.0 606990.0 494330.0 659410.0 545730.0 540170.0 577470.0 631240.0 687330.0 549390.0 True False 584643.9454939615 577829.289289435 526195.3027559649 722080.128141154 588675.8462210499 536798.5986641118 635846.3031640907 629050.3757725243 562528.19817929 544522.8320189517 1.073681232660623 1.0611663190448626 0.9663420371281165 1.3260786980480967 1.081085698534238 0.9858146749766206 1.1677128409960973 1.1552323222887937 1.0330663199072463 1.0 19.054633017318242 GRVS(ph)VPLR ddPTM_KYSE-520_SHP099_60min_R1 1 GRVSVPLR 8 1 Q6A1A2 Q6A1A2 PDPK2P Putative 3-phosphoinositide-dependent protein kinase 2 1 GRVS(1)VPLR 69.998 0.026789999999999998 0.0 1411700.0 1204500.0 926190.0 1036100.0 1078500.0 750860.0 760360.0 1331100.0 1197200.0 1029100.0 True False 1333390.1868458204 1146634.0120086414 985893.6893563956 1134570.6324851757 1163371.8141744123 746173.6042226256 837224.609198482 1326482.724781076 979818.6589560265 1019982.974627684 1.3072671015244512 1.1241697562914594 0.9665785742318574 1.112342716209865 1.140579640164159 0.7315549600178329 0.820822141177491 1.3004949668549821 0.9606225626596187 1.0 19.960113640515843 -2.846261615277635 0.8563334156627147 0.9981653409687579 4.382471478100589 0.2731736368518276 0.15197659674345093 31.905547743107178 2.6170894973085908 0.055106902035531806 173.40075850941363 0.0014247490784003742 2.846261615277635 3.3843061371318313 GRWES(ph)QQDVSQTTVSR ddPTM_KYSE-520_SHP099_60min_R1 1 GRWESQQDVSQTTVSR 16 1 Q9NQT8;H0YBA8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 GRWES(0.974)QQDVS(0.008)QT(0.008)T(0.008)VS(0.002)R 89.35799999999999 0.0033424999999999996 389010000.0 134600.0 138480.0 141410.0 140530.0 151740.0 113810.0 129680.0 132920.0 150500.0 138620.0 True False 127133.46968155223 131827.2129372822 150525.51486399968 153885.92894811477 163681.07471750132 113099.66957432397 142789.31995483596 132458.9315437612 123172.99379625979 137391.934644728 0.9253343000831715 0.9594974645212238 1.0955920757156006 1.1200506736151392 1.1913441290476952 0.823190021064776 1.0392845862754947 0.9640953953103383 0.896508183793787 1.0 17.067937790167946 -6.263930545200681 24.999762174247035 0.9482884156522763 1.0583664489893945 0.2877937452012327 0.08937642417708798 334.6479963310602 3358292.848051505 0.03265705437850985 0.030185508595239944 5.445897397115332e-07 6.263930545200681 0.11007803333711819 GRYPDHSVDRR ddPTM_KYSE-520_SHP099_60min_R1 5 GRYPDHSVDRR 11 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 0 ;;;; 173.76 6.3078e-06 6206170000.0 676336.0 815045.0 706458.0 660777.0 791251.0 745346.0 569558.0 684498.0 810126.0 391641.0 False True 638818.2938376104 775889.0147925129 751997.4130527659 723577.0474101502 853517.9520976527 740694.0191419389 627134.4809904112 682123.636201034 663027.5400145419 388171.3654320869 1.6457120507240912 1.9988311449218932 1.9372820357722462 1.8640660075601188 2.1988173989793722 1.9081624383020805 1.6156124249204376 1.7572744847929178 1.708079469686032 1.0 18.566334171899005 -8.68596655636879 0.5566395985951492 0.9560296910684907 1.9291902738099382 0.7543571196453599 0.15097499032499945 1.2189395715153744 0.5839882730939605 0.28127823734155766 0.07170133095554068 2.0607886019093453e-09 8.68596655636879 0.9731605827414476 GS(ph)DS(ph)EDGEFEIQAEDDAR ddPTM_KYSE-520_SHP099_60min_R1 1 GSDSEDGEFEIQAEDDAR 18 0 Q8TDD1;H0YHZ9;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 2 GS(1)DS(1)EDGEFEIQAEDDAR 130.27 4.1682e-05 0.0 17349.0 14162.0 15893.0 11658.0 14694.0 13920.0 11689.0 13288.0 15939.0 13657.0 True False 16386.616385625934 13481.636262404618 16917.488209699088 12765.972814894492 15850.334202576552 13833.120116638174 12870.63819364651 13241.90702944252 13044.879389492242 13536.009604985222 1.210594323129828 0.9959830596928227 1.2498135494428497 0.9431119796334121 1.1709753956394195 1.0219496380634607 0.9508443455083202 0.9782725792810913 0.9637167651453128 1.0 13.724514876838894 -6.484218966358564 5.493077829040412 0.9728192726084007 1.1054124775429115 0.3693999001188648 0.08712746005060422 0.21397278639058992 16.991732779576008 0.029437335219029113 0.02504928207846249 3.2792991287755917e-07 6.484218966358564 0.13259320493451077 GS(ph)DSLIK ddPTM_KYSE-520_SHP099_60min_R1 7 GSDSLIK 7 0 Q99623-2;Q99623 Q99623-2 PHB2 Prohibitin-2 1 GS(1)DSLIK;GS(1)DSLIK;GS(0.953)DS(0.047)LIK;GS(0.776)DS(0.224)LIK;GS(0.708)DS(0.292)LIK;GS(0.99)DS(0.01)LIK;GS(0.777)DS(0.223)LIK 179.36 0.00027346 9645460000.0 22006300.0 21221300.0 19557100.0 22998700.0 23953900.0 22973100.0 23946600.0 22507400.0 25358700.0 21153100.0 True False 20785566.670528527 20201796.89417929 20817781.958466373 25184489.533188686 25838935.650952637 22829716.36146126 26367356.02429424 22429327.082666673 20754199.320805393 20965699.990862772 0.9914081895470817 0.9635641501587637 0.9929447606108613 1.201223405093297 1.23243849059243 1.0889079005905293 1.257642532125596 1.0698105521132981 0.9899120625521898 1.0 24.321527663081156 -5.176199966212138 6.936657536689916 1.1318436960078129 0.9788093498028969 0.3417870541162247 0.08630305159095551 0.277536801544419 19.337441183337763 0.023951499705305797 0.04180024309593738 6.664998158975623e-06 5.176199966212138 -0.15303434620491596 GS(ph)FEAPR ddPTM_KYSE-520_SHP099_60min_R1 6 GSFEAPR 7 0 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GS(1)FEAPR;GS(1)FEAPR;GS(1)FEAPR;GS(1)FEAPR;GS(1)FEAPR;GS(1)FEAPR 112.84 0.004776600000000001 3072560000.0 6495990.0 6186300.0 5877230.0 5505380.0 5968510.0 6243090.0 5757880.0 5981230.0 6594760.0 5847800.0 True False 6135644.485264982 5889100.862174387 6256085.649700483 6028609.65994715 6438197.78082347 6204124.559553352 6339942.701893524 5960482.509159572 5397317.824370905 5795993.041519559 1.0586010785921123 1.0160641705377924 1.0793811526144104 1.0401340403208292 1.1108015028147 1.0704161504525878 1.0938492604248116 1.0283798594066098 0.9312153733980102 1.0 22.466624432167386 -7.563725911861452 5.351163203464136 0.9673946564282403 1.0661211411459186 0.652820973711557 0.029339016742801538 0.11437214072563831 7.9503652003950664 0.02040108811876338 0.007528467952001732 2.7307006150127037e-08 7.563725911861452 0.09872648471767831 GS(ph)FGAMDDPFK ddPTM_KYSE-520_SHP099_60min_R1 8 GSFGAMDDPFK 11 0 Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R3I1 Q9UBC2-3 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 GS(1)FGAMDDPFK;GS(1)FGAMDDPFK;GS(1)FGAMDDPFK;GS(1)FGAMDDPFK;GS(1)FGAMDDPFK;GS(1)FGAMDDPFK;GS(1)FGAMDDPFK;GS(1)FGAMDDPFK 179.67 4.258999999999999e-06 6262220000.0 14252120.0 12868050.0 11556400.0 13814260.0 13684860.0 14719270.0 14622000.0 15617360.0 15552930.0 15463120.0 True False 13461526.492703147 12249849.562663155 12301344.034893775 15127163.116991283 14761780.625797715 14627401.576094037 16100134.456968011 15563187.023279244 12728909.969459554 15326128.786925325 0.8783383383928716 0.7992787828530754 0.8026386966934543 0.9870178782456938 0.9631773836058944 0.9544094128044017 1.0505023597807026 1.015467587389462 0.8305365396849953 1.0 23.8694899981816 -5.2634790369296764 24.941437607681088 0.9744537630895498 0.8240046185218144 0.5673146681414396 0.05791123867037835 121.6017315110134 1486981.857224979 0.01615090537317987 0.025368117134869854 5.451562093369541e-06 5.2634790369296764 -0.1504491445677354 GS(ph)FGEVHR ddPTM_KYSE-520_SHP099_60min_R1 1 GSFGEVHR 8 0 Q99558 Q99558 MAP3K14 Mitogen-activated protein kinase kinase kinase 14 1 GS(1)FGEVHR 56.013000000000005 0.033416 406250000.0 212710.0 207340.0 161890.0 189580.0 195090.0 184020.0 154560.0 181820.0 200210.0 171750.0 True False 200910.55227312775 197379.07517631512 172325.68843315853 207597.62620069477 210442.47308974116 182871.4629212468 170184.43316023672 181189.30885710695 163856.9108833831 170228.42861947822 1.180240891033748 1.159495372054032 1.0123202677172591 1.2195238356147324 1.236235773286469 1.07427099224437 0.999741550459002 1.0643892464174138 0.962570777467859 1.0 17.377112465652452 -6.506400478804321 5.36904081999706 1.0143676352712823 1.1567939980302464 0.5875101239434879 0.06111505033791581 0.14418941435931742 13.049524186926286 0.023852886171466463 0.01976298322826252 3.11601486773553e-07 6.506400478804321 0.14242636275896414 GS(ph)FKDDPQLYQEIQER ddPTM_KYSE-520_SHP099_60min_R1 1 GSFKDDPQLYQEIQER 16 1 Q5VV41 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 GS(1)FKDDPQLYQEIQER 88.036 0.001483 848250000.0 1743400.0 1513500.0 1341900.0 1267600.0 1237400.0 1162900.0 1205300.0 1351500.0 1615500.0 1397800.0 True False 1646690.1266182612 1440789.1881901831 1428401.0211159145 1388072.3228821647 1334776.3401570865 1155641.909744148 1327143.4865944155 1346811.961942472 1322165.923440915 1385416.5794719448 1.1885884368771604 1.0399682012895672 1.031026365846115 1.001916927694941 0.9634476445098124 0.8341475963746758 0.9579382160276007 0.9721350111573033 0.9543453882621082 1.0 20.401888413304523 -3.580533178670476 0.6971255257924629 0.9435474216118458 1.644447372042002 0.7214028512043612 0.044563828327117916 3.8065734872083494 0.7101938728902699 0.019298049417256432 2.612848284219439 0.00026270408215211887 3.580533178670476 0.7008999504301563 GS(ph)FMLGLETHDR ddPTM_KYSE-520_SHP099_60min_R1 1 GSFMLGLETHDR 12 0 Q92905 Q92905 COPS5 COP9 signalosome complex subunit 5 1 GS(1)FMLGLETHDR 230.86 5.6406e-12 177010000.0 146700.0 146010.0 154600.0 138890.0 141370.0 132220.0 128000.0 154840.0 162180.0 168420.0 True False 138562.25856080023 138995.46043452187 164565.76336874615 152090.0638411989 152495.01471473038 131394.76593548138 140939.48915961632 154302.89617992766 132732.200225099 166927.92982877727 0.8300723474072162 0.8326674905577124 0.9858491837617943 0.9111121428103853 0.9135380452579077 0.7871346998088141 0.844313407014524 0.9243683566806378 0.7951467460313333 1.0 17.348865836293307 -10.2240564363064 4.263897789661397 1.0000591444777107 0.8726938407001139 0.29668684283542235 0.06014704494851486 3.693791549550837e-05 6.721990580060208e-06 0.060138935323785364 0.014578675572182715 5.969577072486711e-11 10.2240564363064 -0.1273653037775968 GS(ph)FSSENYWR ddPTM_KYSE-520_SHP099_60min_R1 4 GSFSSENYWR 10 0 Q6P6C2-3;Q6P6C2;K7ER58;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 GS(0.981)FS(0.017)S(0.001)ENYWR;GS(0.983)FS(0.017)SENYWR;GS(0.999)FS(0.001)SENYWR;GS(1)FSSENYWR 213.69 4.7541e-09 1921100000.0 766610.0 724010.0 635670.0 719840.0 783340.0 838670.0 790100.0 952730.0 915470.0 875120.0 True False 724084.6151008523 689227.4728388344 676646.3053079606 788253.3771722118 844984.4014050837 833435.5494411594 869971.0186329115 949425.2019988535 749243.7251206768 867367.1176330568 0.8348075461712157 0.7946202465222054 0.7801152378873308 0.9087886330337986 0.9741946451820159 0.960879807982008 1.0030020748388069 1.09460594331697 0.8638138452438399 1.0 19.726283225307952 -5.515280944491642 2.436509586731381 0.988732085187216 0.8016959727843832 0.679686350186413 0.054927820279047114 0.16161094278861596 1.9208919743568076 0.016811500207054537 0.02529938491050396 3.0529455280996263e-06 5.515280944491642 -0.1870361124028328 GS(ph)GDTSSLIDPDTSLSELR ddPTM_KYSE-520_SHP099_60min_R1 1 GSGDTSSLIDPDTSLSELR 19 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 GS(0.998)GDT(0.001)SSLIDPDTSLSELR 91.62200000000001 0.00057272 0.0 487620.0 422040.0 446500.0 482700.0 416300.0 443730.0 464290.0 455250.0 566210.0 508050.0 True False 460570.74655362876 401764.56490504503 475282.1044252592 528575.6628709525 449060.4415770121 440960.51647671417 511224.96423373575 453670.8440061491 463400.536992559 503549.0722569191 0.9146491810407664 0.7978657633194051 0.9438645220713711 1.0497004006021968 0.891790823016141 0.8757051512384254 1.0152435828000101 0.9009466385724542 0.9202688725362685 1.0 18.941772854162302 -4.831072877566138 10.638401503492837 0.9474630500880071 0.8563778732131363 0.2801840690933082 0.05982326002925162 0.5173478395149573 75.93729820023357 0.015604960760162618 0.032557626097789547 1.4754589204647769e-05 4.831072877566138 -0.09108517687487083 GS(ph)GFSLDVIDGPISQR ddPTM_KYSE-520_SHP099_60min_R1 7 GSGFSLDVIDGPISQR 16 0 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 GS(1)GFSLDVIDGPISQR;GS(0.66)GFS(0.34)LDVIDGPISQR;GS(1)GFSLDVIDGPISQR;GS(0.999)GFS(0.001)LDVIDGPISQR;GS(1)GFSLDVIDGPISQR;GS(0.997)GFS(0.003)LDVIDGPISQR;GS(0.959)GFS(0.041)LDVIDGPISQR 330.35 3.4936e-49 1441921000.0 3194365.0 2803397.0 2788117.0 2917770.0 2865581.0 2799233.0 2488747.0 2641553.0 2940101.0 2736756.0 True False 3017167.205641246 2668717.6001353133 2967843.4829649264 3195073.9835404605 3091085.921774432 2781761.9485242376 2740333.834590053 2632390.0691861045 2406252.7723147967 2712510.471003948 1.1123154133021795 0.9838552251367251 1.0941316226021702 1.1779029123371116 1.1395664476938836 1.0255304000705512 1.010257421633402 0.9704626386978741 0.8870943718142406 1.0 21.3711972760744 -6.799587711208744 1.7396129537342389 0.9485554468989664 1.0969411105988884 0.5742796712731011 0.05503717254724472 0.28858462162468296 1.7795190678498063 0.03296343410255513 0.019701390631454267 1.5863984935554563e-07 6.799587711208744 0.148385663699922 GS(ph)GGGGGGGGQGSTNYGK ddPTM_KYSE-520_SHP099_60min_R1 10 GSGGGGGGGGQGSTNYGK 18 0 Q99729-3;Q99729-4 Q99729-3 HNRNPAB Heterogeneous nuclear ribonucleoprotein A/B 1 GS(1)GGGGGGGGQGSTNYGK;GS(1)GGGGGGGGQGSTNYGK;GS(0.999)GGGGGGGGQGSTNYGK;GS(1)GGGGGGGGQGSTNYGK;GS(1)GGGGGGGGQGSTNYGK;GS(1)GGGGGGGGQGSTNYGK;GS(1)GGGGGGGGQGSTNYGK;GS(1)GGGGGGGGQGSTNYGK;GS(1)GGGGGGGGQGSTNYGK;GS(1)GGGGGGGGQGSTNYGK 300.86 2.1787e-38 6751344000.0 8665751.0 7695380.0 7487370.0 7698109.0 7889271.0 7949930.0 7964714.0 8016745.0 9198300.0 8178644.0 True False 8185044.517283659 7325682.393799126 7970017.850415582 8429734.96483914 8510111.743888345 7900311.537993198 8769865.019237831 7988936.7827173425 7528120.590273331 8106187.577048744 1.009727993521663 0.9037148874448104 0.9832017547905376 1.0399136319897733 1.0498291167087277 0.9746026060834753 1.0818729440789372 0.9855356425919163 0.9286881803213993 1.0 22.950592129034977 -4.999039396105268 24.990360364606982 1.0113954661234952 0.9534056525905611 0.16387548429148724 0.046788546894847384 50.76023539608565 1320368.2310202906 0.01218462265844744 0.025043849843622297 1.0022143202021645e-05 4.999039396105268 -0.05798981353293409 GS(ph)GGLFS(ph)PSTAHVPDGALGQR ddPTM_KYSE-520_SHP099_60min_R1 4 GSGGLFSPSTAHVPDGALGQR 21 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 GS(1)GGLFS(0.967)PS(0.022)T(0.011)AHVPDGALGQR;GS(1)GGLFS(0.785)PS(0.18)T(0.035)AHVPDGALGQR;GS(1)GGLFS(0.99)PS(0.008)T(0.002)AHVPDGALGQR;GS(1)GGLFS(0.983)PS(0.009)T(0.008)AHVPDGALGQR 160.67 3.7491e-09 1585530000.0 596610.0 725780.0 672310.0 970080.0 761420.0 910300.0 1029930.0 1182880.0 1315360.0 1176410.0 True False 563514.8539874502 690912.4393820096 715648.1783340345 1062276.111534814 821339.4221128239 904618.4800413604 1134045.3755481527 1178776.8653662687 1076523.7815272294 1165987.9226331303 0.48329390300619446 0.5925553995634312 0.613769803651052 0.9110524139357242 0.7044150339550751 0.7758386364744466 0.9726047358939686 1.0109683320769371 0.9232718115091058 1.0 20.153121414425595 -4.129574890969934 0.31008111778873526 1.0257649732547915 1.900956656490779e-14 0.8168927910915715 0.07768093427005898 3.4498712774422997 0.2537138189908723 0.0890631448777968 1.367020412377716 7.420362278776422e-05 4.129574890969934 -1.0257649732547724 down GS(ph)GGLFSPSTAHVPDGALGQR ddPTM_KYSE-520_SHP099_60min_R1 8 GSGGLFSPSTAHVPDGALGQR 21 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GS(0.504)GGLFS(0.459)PS(0.019)T(0.019)AHVPDGALGQR;GS(1)GGLFSPSTAHVPDGALGQR;GS(0.595)GGLFS(0.323)PS(0.041)T(0.041)AHVPDGALGQR;GS(1)GGLFSPSTAHVPDGALGQR;GS(1)GGLFSPSTAHVPDGALGQR;GS(1)GGLFSPSTAHVPDGALGQR;GS(0.622)GGLFS(0.285)PS(0.068)T(0.025)AHVPDGALGQR;GS(1)GGLFSPSTAHVPDGALGQR 207.16 7.423000000000001e-15 12033190000.0 3793950.0 6191390.0 7744300.0 8950440.0 4437470.0 5555660.0 4252790.0 3895670.0 4802820.0 5195560.0 True False 3583492.0304481788 5893946.330934145 8243509.969318116 9801087.126552094 4786673.643249448 5520985.065172556 4682703.5164306555 3882156.8300262163 3930748.9572395473 5149531.380484515 0.6958870168320076 1.1445597464015431 1.600827213241002 1.9032969026455215 0.9295357751172835 1.0721334927865012 0.9093455637879935 0.7538854593135711 0.7633216824614644 1.0 22.296009718938024 -5.955072750397773 24.99900082883909 0.8978296245590853 1.3507463345530937 0.32704441388709704 0.3031454703113279 163.85771742098356 91175.07437208066 0.10208859668765705 0.11575754101431371 1.1089890285343765e-06 5.955072750397773 0.45291670999400835 GS(ph)GLAGPK ddPTM_KYSE-520_SHP099_60min_R1 10 GSGLAGPK 8 0 Q9Y6W5 Q9Y6W5 WASF2 Wiskott-Aldrich syndrome protein family member 2 1 GS(1)GLAGPK;GS(1)GLAGPK;GS(1)GLAGPK;GS(1)GLAGPK;GS(1)GLAGPK;GS(1)GLAGPK;GS(1)GLAGPK;GS(1)GLAGPK;GS(1)GLAGPK;GS(1)GLAGPK 133.83 0.00075608 13296110000.0 22957910.0 20526850.0 19652760.0 22613890.0 24023350.0 24244110.0 24213860.0 21818110.0 25462570.0 26810400.0 True False 21684388.966841035 19540709.31457001 20919608.355127797 24763107.306486055 25913850.970836196 24092793.51659402 26661633.273300502 21742428.068795167 20839209.147154983 26572880.71417556 0.8160345579421237 0.7353628507482755 0.7872540647792103 0.9318939701285731 0.9751991607372926 0.9066684856543041 1.0033399675435866 0.8182187058551186 0.7842284534863435 1.0 24.66345130027389 -5.228771444451474 6.543650228876641 0.9151254869437622 0.7740749001725106 0.44786705141737837 0.0699055866893795 0.1958514279573288 27.946267068389282 0.020025107317179252 0.03427393033850068 5.905117662123925e-06 5.228771444451474 -0.1410505867712516 GS(ph)GTAEVELKK ddPTM_KYSE-520_SHP099_60min_R1 1 GSGTAEVELKK 11 1 P14618;P14618-3;H3BUW1;H3BTJ2;H3BT25;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 GS(0.976)GT(0.024)AEVELKK 86.944 0.0022281999999999996 390990000.0 353080.0 352550.0 285170.0 284730.0 332710.0 296390.0 285820.0 335270.0 402320.0 303100.0 True False 333493.94855246966 335612.96881166106 303552.51448813226 311790.6535928041 358892.38413905265 294540.1200697117 314713.47493438656 334107.0266226066 329268.8296618686 300414.769808232 1.1101116924622365 1.1171653411911058 1.0104447084339534 1.0378672586299063 1.194656255976194 0.9804448704626927 1.0475965450542994 1.112152464527233 1.09604740762931 1.0 18.19659621873132 GS(ph)IDREDGSLQGPIGNQHIYQPVGKPDPAAPPK ddPTM_KYSE-520_SHP099_60min_R1 5 GSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK 33 2 E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397-7;Q05397;B4DWJ1;Q05397-6 E9PEI4 PTK2 Focal adhesion kinase 1 1 GS(1)IDREDGSLQGPIGNQHIYQPVGKPDPAAPPK;GS(0.786)IDREDGS(0.214)LQGPIGNQHIYQPVGKPDPAAPPK;GS(1)IDREDGSLQGPIGNQHIYQPVGKPDPAAPPK;GS(0.994)IDREDGS(0.006)LQGPIGNQHIYQPVGKPDPAAPPK;GS(1)IDREDGSLQGPIGNQHIYQPVGKPDPAAPPK 254.64 3.5185e-32 13509350000.0 6818630.0 5883490.0 5514160.0 6446340.0 6156370.0 6704430.0 6451010.0 6666670.0 7036940.0 6051270.0 True False 6440387.00129808 5600838.30910146 5869611.57656795 7058998.215437215 6640841.294046295 6662585.16548797 7103141.046590441 6643544.877782468 5759209.082821599 5997660.455616821 1.0738165404589795 0.9338371771039928 0.978650195355932 1.1769586270637327 1.107238621323942 1.1108640135252148 1.1843186354336441 1.1076893943805664 0.9602426021679985 1.0 22.515968418829317 -5.238699516947305 24.640966578288385 1.1021685994293755 0.9892748681481861 0.26249903951750675 0.07306771039809211 786.3656707790705 852106.113222673 0.019671036549083247 0.03403962607289862 5.771656591538844e-06 5.238699516947305 -0.1128937312811894 GS(ph)IGLLLGK ddPTM_KYSE-520_SHP099_60min_R1 6 GSIGLLLGK 9 0 Q8IY63;Q8IY63-2 Q8IY63 AMOTL1 Angiomotin-like protein 1 1 GS(1)IGLLLGK;GS(1)IGLLLGK;GS(1)IGLLLGK;GS(1)IGLLLGK;GS(1)IGLLLGK;GS(1)IGLLLGK 137.89 0.00045148 2174079000.0 3614354.0 2586990.0 2473499.0 2278527.0 2307443.0 2286028.0 2068899.0 2477161.0 2953168.0 2498496.0 True False 3413858.5785839288 2462707.1172488434 2632944.7032783274 2495077.521015877 2489025.6365452437 2271760.0512929712 2278043.501428441 2468568.306664722 2416947.1345070605 2476361.2692404734 1.3785785704971052 0.9944862035433877 1.0632312562721835 1.0075579649899564 1.0051141032861715 0.917378283819527 0.9199156559766183 0.996853059094184 0.9760074850663305 1.0 21.239790369870505 -1.7538476303379311 1.200050246692867 0.9751446801323904 199.9946203308141 0.8793683545557847 0.04317749758152895 250.32567302148092 0.9555594067930014 0.013307022131733431 136451.2398298376 0.017625943337887872 1.7538476303379311 199.0194756506817 GS(ph)ISEDELITAIK ddPTM_KYSE-520_SHP099_60min_R1 1 GSISEDELITAIK 13 0 Q2NKQ5;Q16799 Q2NKQ5 RTN1 Reticulon;Reticulon-1 1 GS(0.68)IS(0.32)EDELITAIK 106.17 0.00060874 95701000.0 93939.0 115730.0 69801.0 81581.0 88702.0 106550.0 75401.0 96744.0 134910.0 104680.0 True False 88728.01640724624 110170.15708572848 74300.48414554873 89334.433711778 95682.34275465802 105884.98192728433 83023.26892284544 96408.41764421933 110413.74480434155 103752.61663980751 0.8551882283150372 1.0618542515240883 0.7161311835005936 0.8610330669723313 0.9222161893693087 1.020552400089143 0.8002040971272363 0.929214325060498 1.064202025744171 1.0 16.66278819610766 -7.635101851560122 5.268433505044755 1.0296465408418607 0.8939379298105824 0.25407870628198115 0.09500932098579808 0.29323843378975434 12.081612038684925 0.06805750177393909 0.024200972481704754 2.316851233933084e-08 7.635101851560122 -0.1357086110312783 GS(ph)KESLVPQR ddPTM_KYSE-520_SHP099_60min_R1 1 GSKESLVPQR 10 1 O95835;O95835-2;H0YG09 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 GS(0.999)KES(0.001)LVPQR 100.11 0.0013943 340340000.0 308620.0 262750.0 247230.0 250990.0 327370.0 329010.0 326180.0 387040.0 323980.0 358600.0 True False 291500.23338128283 250127.0956042096 263166.84138198604 274844.0141371052 353132.1565194964 326956.52654993685 359153.4576100279 385697.4485758148 265153.39887117746 355423.08298657817 0.8201499771254045 0.7037446569379264 0.7404326111028754 0.7732869002981557 0.9935543678034883 0.9199079694052502 1.0104955890655831 1.0851783889072277 0.7460218864884205 1.0 18.439177854815362 -5.723164279884464 6.494144476935703 0.9641162967641922 0.7523764605608912 0.5573364230110454 0.08712367854899511 0.13393968662180444 15.257033652438404 0.02520223011232481 0.03210073776739819 1.891627940195224e-06 5.723164279884464 -0.21173983620330095 GS(ph)KSPDLLMYQGPPDTAEIIK ddPTM_KYSE-520_SHP099_60min_R1 3 GSKSPDLLMYQGPPDTAEIIK 21 1 P82909 P82909 MRPS36 28S ribosomal protein S36, mitochondrial 1 GS(0.626)KS(0.374)PDLLMYQGPPDTAEIIK;GS(0.603)KS(0.397)PDLLMYQGPPDTAEIIK;GS(0.611)KS(0.389)PDLLMYQGPPDTAEIIK 190.19 2.3007e-13 1247640000.0 969000.0 1110650.0 799990.0 760200.0 827050.0 1063400.0 939010.0 890090.0 1279630.0 1041490.0 True False 915247.6383463896 1057292.706880362 851558.6354292559 832449.179437536 892134.1297292052 1056762.9261517995 1033934.2946544616 887002.4855385687 1047281.4488472281 1032263.2088669591 0.8866417309893191 1.0242472053623572 0.8249433168929371 0.8064311236581371 0.8642506311044801 1.0237339828392529 1.0016188562889272 0.8592793755694997 1.0145488474753968 1.0 19.97737944871977 -6.247625237302205 24.552539415282766 0.9724025899149683 0.8819535328527589 0.33161668275554645 0.06954132029367292 887.2804771909048 1577007.0118550498 0.024490971616675815 0.024363024883445362 5.654246823189321e-07 6.247625237302205 -0.0904490570622094 GS(ph)KSPSPRPNMPVR ddPTM_KYSE-520_SHP099_60min_R1 2 GSKSPSPRPNMPVR 14 2 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 GS(0.555)KS(0.426)PS(0.019)PRPNMPVR;GS(0.593)KS(0.364)PS(0.043)PRPNMPVR 82.663 0.0046687 968290000.0 905080.0 785020.0 658670.0 783190.0 596130.0 712820.0 609360.0 669010.0 795560.0 590290.0 True False 854873.4081677512 747306.4608609563 701128.9221092615 857624.1421253402 643042.0394842761 708371.0259728467 670960.0555804974 666689.3604581082 651106.3584355639 585060.4898386714 1.4611709780701134 1.2773148654543802 1.1983870630241937 1.4658726012447487 1.0991035126326731 1.2107654478055385 1.1468216829434381 1.1395221041878008 1.11288724797517 1.0 19.158226268156355 -1.0000001015348803 0.1272121007446501 0.9266299786389435 2.5020436238750023 0.6206869787239786 0.08882359694061052 58.21944558682476 0.5044932575668519 0.5029948416049713 16.39389633850929 0.09999997662073255 1.0000001015348803 1.575413645236059 GS(ph)LAS(ph)LDS(ph)LRK ddPTM_KYSE-520_SHP099_60min_R1 10 GSLASLDSLRK 11 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 3 GS(1)LAS(1)LDS(1)LRK;GS(1)LAS(1)LDS(1)LRK;GS(1)LAS(1)LDS(1)LRK;GS(1)LAS(1)LDS(1)LRK;GS(1)LAS(1)LDS(1)LRK;GS(1)LAS(1)LDS(1)LRK;GS(1)LAS(1)LDS(1)LRK;GS(1)LAS(1)LDS(1)LRK;GS(1)LAS(1)LDS(1)LRK;GS(1)LAS(1)LDS(1)LRK 126.63 0.00014502 9990040000.0 17881700.0 14534100.0 13289280.0 14186270.0 13811190.0 14870680.0 14082340.0 16612640.0 19809280.0 14834650.0 True False 16889766.454714786 13835860.019871134 14145928.25239981 15534528.835542416 14898052.078078333 14777866.570121337 15505920.357593993 16555014.629259335 16212414.103311427 14703226.542183043 1.1487115706378213 0.9410084228911617 0.9620968711742035 1.0565387665744248 1.0132505294219838 1.0050764386799151 1.0545930386849478 1.1259443348549094 1.1026432910353776 1.0 23.809629445505927 -6.9685759294133 4.876745998153114 1.0868384365247272 1.0164976072944052 0.13424991124849928 0.061020521792394 0.29598930003868545 17.445211380699735 0.02644838389841349 0.01697202832058535 1.0750386307271823e-07 6.9685759294133 -0.07034082923032203 GS(ph)LAS(ph)LDSLR ddPTM_KYSE-520_SHP099_60min_R1 2 GSLASLDSLR 10 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 2 GS(1)LAS(1)LDSLR;GS(1)LAS(1)LDSLR 152.47 0.00014330000000000001 1120630000.0 4398090.0 3569940.0 3173240.0 2931220.0 3387690.0 3561660.0 3200630.0 3340220.0 4633380.0 3296840.0 True False 4154119.1803249456 3398434.723810812 3377792.1277635144 3209802.2674965705 3654281.929680587 3539430.358809301 3524180.915538611 3328633.556433205 3792074.990004739 3267632.562502707 1.2712932378000517 1.0400296418909238 1.0337123477483146 0.9823020814305254 1.1183270639467926 1.083178812521816 1.0785119954978695 1.018668253778135 1.1604961443707602 1.0 21.639814334307673 -4.258469280055481 24.90279989788499 1.0581368593170675 1.2712933199469456 0.6064348290386341 0.05172575609297321 177.84212770200426 1491039.1494913427 0.012572400348402362 0.0855878318668306 5.5148121018340885e-05 4.258469280055481 0.21315646062987814 GS(ph)LAS(ph)LDSLRK ddPTM_KYSE-520_SHP099_60min_R1 1 GSLASLDSLRK 11 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 2 GS(1)LAS(0.99)LDS(0.01)LRK 86.291 0.011904999999999999 809420000.0 1013300.0 917010.0 834510.0 696670.0 844220.0 771530.0 832340.0 789570.0 1054000.0 749840.0 True False 957090.2290365305 872955.4631399291 888303.8498632091 762881.307338527 910655.3110452674 766714.5950854786 916481.050055585 786831.1659570228 862620.1691777916 743197.0009666932 1.2878015220616088 1.1745949754970164 1.195246817072421 1.026485987357632 1.225321563274283 1.031643822685231 1.2331603180092188 1.0587114384659433 1.1606884420359098 1.0 19.503385154441542 -1.0000000000000002 0.09809409429438289 0.9627881833957957 1.7145584606786524 0.3391436019468189 0.07852727341558328 164.1360579984551 1.1467517049793825 1.027395264688545 16.601204877992398 0.09999999999999995 1.0000000000000002 0.7517702772828566 GS(ph)LASLDS(ph)LRK ddPTM_KYSE-520_SHP099_60min_R1 3 GSLASLDSLRK 11 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 2 GS(1)LAS(0.001)LDS(0.999)LRK;GS(1)LAS(0.007)LDS(0.993)LRK;GS(0.999)LAS(0.014)LDS(0.987)LRK 150.39 3.7931e-05 1128780000.0 1675930.0 1414140.0 1349620.0 1350010.0 1461350.0 1539250.0 1362360.0 1567640.0 2170200.0 1499100.0 True False 1582962.8220163716 1346202.5917325837 1436618.6646683498 1478314.544504693 1576349.9310558906 1529642.9697942035 1500080.6441523007 1562202.2227299274 1776146.3862899835 1485819.1402821515 1.065380556152866 0.9060339547631246 0.9668866322421592 0.9949491862273133 1.0609298859594363 1.0294947267294794 1.0095984117336387 1.0514080619753432 1.1953987791224039 1.0 20.502827085404032 -6.24241629119389 0.7790277956558207 1.0792218675514083 0.9730568496129669 0.24362571820408974 0.06264223911208591 0.8817467092033342 1.1695929901866917 0.042781756178728404 0.04219764454255944 5.722472427616531e-07 6.24241629119389 -0.10616501793844135 GS(ph)LASLDSLR ddPTM_KYSE-520_SHP099_60min_R1 7 GSLASLDSLR 10 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 1 GS(1)LASLDSLR;GS(1)LASLDSLR;GS(0.988)LAS(0.012)LDSLR;GS(0.998)LAS(0.002)LDSLR;GS(0.771)LAS(0.229)LDSLR;GS(0.997)LAS(0.003)LDSLR;GS(1)LASLDSLR 223.07 2.3556999999999996e-09 6982650000.0 5540040.0 4960160.0 4303300.0 4103130.0 4646110.0 5017280.0 4292110.0 4333540.0 5992660.0 4380090.0 True False 5232722.9374040635 4721866.468248049 4580697.603523444 4493090.241548979 5011732.424250237 4985965.294454485 4725998.365756879 4318507.961195844 4904544.006665072 4341285.810258457 1.2053394238727937 1.0876654232463294 1.055147669084412 1.0349676197157551 1.1544350322219086 1.1484996640102916 1.0886171913835632 0.9947532021483614 1.1297445551904544 1.0 22.049690975436974 -8.805371663610941 0.013010116747637506 2.375329030902803e-05 2.1019946124600253 0.25468628490214795 0.0571873336938332 2770.874321487192 12.340444657263578 1037.441342885939 955.3191963094307 1.5654108383271768e-09 8.805371663610941 2.1019708591697164 GS(ph)LDESSLGFGYPK ddPTM_KYSE-520_SHP099_60min_R1 10 GSLDESSLGFGYPK 14 0 Q2KJU6;Q9BUZ4 Q2KJU6 TRAF4 TNF receptor-associated factor 4 1 GS(1)LDESSLGFGYPK;GS(1)LDESSLGFGYPK;GS(1)LDESSLGFGYPK;GS(1)LDESSLGFGYPK;GS(1)LDESSLGFGYPK;GS(1)LDESSLGFGYPK;GS(1)LDESSLGFGYPK;GS(1)LDESSLGFGYPK;GS(0.999)LDES(0.001)SLGFGYPK;GS(1)LDESSLGFGYPK 283.13 1.2778e-32 10279880000.0 6397070.0 5927160.0 5620830.0 5484020.0 5562280.0 5841580.0 5525890.0 5551570.0 6850860.0 5868410.0 True False 6042211.774857118 5642410.336751465 5983157.695445977 6005219.611969263 5999999.790955993 5805120.532395915 6084500.888689306 5532312.899416183 5606916.520126534 5816420.452953893 1.038819635500827 0.9700829543514076 1.0286666419390995 1.0324596821262273 1.0315622537068945 0.9980572380127302 1.046090278016141 0.951154226927762 0.9639806072270856 1.0 22.471700130787113 -7.268283469275017 24.996794856392032 0.9681755613172497 1.0191555702048356 0.46736038995628226 0.023889161819235546 473.7177103776493 1730157.7398920378 0.01236740721288877 0.0061386549767349155 5.3915859228887615e-08 7.268283469275017 0.050980008887585915 GS(ph)LPSGTTIEWLEPK ddPTM_KYSE-520_SHP099_60min_R1 9 GSLPSGTTIEWLEPK 15 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 GS(0.409)LPS(0.409)GT(0.077)T(0.104)IEWLEPK;GS(1)LPSGTTIEWLEPK;GS(1)LPSGTTIEWLEPK;GS(0.996)LPS(0.004)GTTIEWLEPK;GS(1)LPSGTTIEWLEPK;GS(0.839)LPS(0.16)GT(0.001)TIEWLEPK;GS(0.999)LPS(0.001)GTTIEWLEPK;GS(1)LPSGTTIEWLEPK;GS(1)LPSGTTIEWLEPK 295.37 2.8053e-33 1778107000.0 1901089.0 1822055.0 1437624.0 1380409.0 1589382.0 1460266.0 1433666.0 1445995.0 1744231.0 1559097.0 True False 1795631.8034430323 1734520.7428396891 1530295.54331973 1511602.6563249012 1714457.3210534595 1451151.9382358303 1578594.9505117992 1440979.180842772 1427522.6188853418 1545284.6135391116 1.1620071718248455 1.1224603724405025 0.9903001232989355 0.978203395724578 1.1094767307149314 0.9390839237778389 1.0215561176762111 0.9325008274964619 0.9237926828352587 1.0 20.55944115031829 -1.000000006680031 0.40933876285606974 0.9632759450184248 4.6443673194617014 0.5834818337921333 0.05207980795362051 52.624397564839995 0.6887310114746291 0.036759302090327926 157.33067552680987 0.09999999846186604 1.000000006680031 3.6810913744432767 GS(ph)LSNAGDPEIVK ddPTM_KYSE-520_SHP099_60min_R1 5 GSLSNAGDPEIVK 13 0 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 GS(1)LSNAGDPEIVK;GS(0.999)LS(0.001)NAGDPEIVK;GS(0.999)LS(0.001)NAGDPEIVK;GS(0.773)LS(0.227)NAGDPEIVK;GS(1)LSNAGDPEIVK 296.44 2.0718999999999998e-30 2824920000.0 5818110.0 4816860.0 4309410.0 5066300.0 5138450.0 5114170.0 5562040.0 5706220.0 5367230.0 5323800.0 True False 5495367.840185266 4585450.815345734 4587201.4638997875 5547799.628761369 5542816.781218828 5082250.568024958 6124305.283479302 5686426.454661766 4392676.328857801 5276635.273853723 1.0414530387224954 0.8690103782740339 0.8693421519258396 1.0513896338925097 1.050445310989005 0.9631612389827355 1.1606459354554735 1.077661456504034 0.8324767775070544 1.0 22.33118683582139 -5.270777513234989 24.618192584019358 1.0274689611427874 0.920842707300403 0.1723774847388294 0.09173507403020544 807.5147957441118 2128856.5854287148 0.025859620767094107 0.038971485548979355 5.36071213626636e-06 5.270777513234989 -0.10662625384238444 GS(ph)LTFEPLTLVPIQTK ddPTM_KYSE-520_SHP099_60min_R1 2 GSLTFEPLTLVPIQTK 16 0 Q5T6H7;Q9NQW7-2;Q9NQW7;Q9NQW7-4;Q9NQW7-3 Q5T6H7 XPNPEP1 Xaa-Pro aminopeptidase 1 1 GS(0.996)LT(0.004)FEPLTLVPIQTK;GS(1)LTFEPLTLVPIQTK 251.91 1.2923e-23 319360000.0 702730.0 688030.0 687850.0 570250.0 617550.0 734400.0 643770.0 659900.0 742080.0 726880.0 True False 663748.1660424762 654976.0060459153 732189.9115989136 624446.388548086 666147.6716211485 729816.337188152 708848.5541897356 657610.9609218186 607336.9783144743 720440.4087040833 0.9213089077504908 0.9091328000661091 1.0163087782873883 0.8667564742395978 0.9246395171245382 1.0130141624078721 0.9839100439477028 0.9127902224484031 0.843007930950101 1.0 19.45851957711637 GS(ph)LTLTISGES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 GSLTLTISGESPK 13 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 2 GS(0.998)LT(0.002)LT(0.007)IS(0.013)GES(0.979)PK 113.11 0.00015218 116630000.0 314160.0 280200.0 260950.0 276900.0 288800.0 232070.0 281940.0 282260.0 320060.0 227330.0 True False 296732.91853756673 266738.77141122543 277771.25453476264 303216.492746979 311526.91695277666 230621.56504800456 310441.2466692354 281280.90593997913 261945.1720560191 225316.03306006358 1.316963176155623 1.1838428352771486 1.2328073185129964 1.3457386437570962 1.3826220563262421 1.0235470681597107 1.3778036229959703 1.248383890484157 1.1625678319402646 1.0 17.781590451096047 -8.066271826910294 2.437206593591756 1.000695334448109 1.2629926076427895 0.39526394034468393 0.10096776467041792 0.3620830942984357 4.907961720530784 0.09507395310176961 0.02589860636229486 8.58476029225101e-09 8.066271826910294 0.26229727319468044 GS(ph)LTLTISGESPK ddPTM_KYSE-520_SHP099_60min_R1 6 GSLTLTISGESPK 13 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 GS(0.945)LT(0.055)LTISGESPK;GS(0.897)LT(0.099)LT(0.003)IS(0.001)GESPK;GS(1)LTLTISGESPK;GS(1)LTLTISGESPK;GS(0.728)LT(0.272)LTISGESPK;GS(0.99)LT(0.009)LT(0.001)ISGESPK 370.77 1.2260999999999998e-64 6683640000.0 5718560.0 5557960.0 5577120.0 4609510.0 4654220.0 4759970.0 5083670.0 5033060.0 5915760.0 5336970.0 True False 5401340.077133261 5290947.258931962 5936630.078907511 5047596.444500286 5020480.635110648 4730261.261608785 5597576.97543801 5015601.489585033 4841607.108173826 5289688.597899835 1.0211073822526633 1.0002379461491602 1.1223023754677226 0.9542331937090462 0.9491070300629663 0.8942419150130767 1.0582053880563813 0.9481846420177508 0.9152915183128341 1.0 22.33475136321561 -5.310088523280255 24.978818406444667 0.9586470547706466 1.0431181744127416 0.37941337195590963 0.05144214146881135 397.16584187310065 203923.1777136986 0.014477547388228837 0.021473729940094326 4.896789967572139e-06 5.310088523280255 0.08447111964209497 GS(ph)PAGS(ph)VGCCSEKQEEDGLDFLNNLEPK ddPTM_KYSE-520_SHP099_60min_R1 1 GSPAGSVGCCSEKQEEDGLDFLNNLEPK 28 1 Q14574 Q14574 DSC3 Desmocollin-3 2 GS(0.999)PAGS(0.613)VGCCS(0.389)EKQEEDGLDFLNNLEPK 75.248 0.012156 50437000.0 56349.0 61745.0 49700.0 63731.0 79325.0 65108.0 64474.0 85686.0 126620.0 62822.0 True False 53223.20864105341 58778.67751886552 52903.74152281159 69787.97507857613 85567.42620248975 64701.63682141365 70991.66112560227 85388.77526526283 103628.99983044792 62265.445954776405 0.854779208996746 0.9440015504194199 0.8496484801736706 1.1208138640693805 1.3742361415774271 1.0391258880311667 1.1401453894213454 1.3713669589274438 1.66430992730244 1.0 15.92614414505466 -5.442303236659751 3.655047346597064 1.2658618976525344 0.8906012711674851 0.46996395581582184 0.18089004757064606 0.22415398580430046 5.664838897749772 0.05504461113741003 0.08271460301360223 3.6115760415452543e-06 5.442303236659751 -0.3752606264850493 GS(ph)PAGSVGCCS(ph)EKQEEDGLDFLNNLEPK ddPTM_KYSE-520_SHP099_60min_R1 1 GSPAGSVGCCSEKQEEDGLDFLNNLEPK 28 1 Q14574 Q14574 DSC3 Desmocollin-3 2 GS(0.98)PAGS(0.365)VGCCS(0.655)EKQEEDGLDFLNNLEPK 76.937 0.010763 61047000.0 71447.0 87171.0 56575.0 91920.0 109790.0 76630.0 82939.0 108880.0 167940.0 64793.0 True False 67483.69248393655 82983.17431366148 60221.91502320057 100656.04916324434 118429.84838035119 76151.72374554476 91323.28352663598 108502.32069278295 137446.3294228827 64218.98442819123 1.050837117478802 1.292190698008501 0.9377587571559913 1.5673877445974955 1.8441563571092874 1.1858132672698454 1.4220605377020932 1.6895676824990704 2.140275662200377 1.0 15.970712229726846 -5.276831944109919 23.306051664578916 1.5703909728996581 1.1134550761282058 0.30738540322923535 0.3123960024174027 390.2162370646494 590830.0682039686 0.0878131456687802 0.13092167992828882 5.286497800983203e-06 5.276831944109919 -0.4569358967714523 GS(ph)PAHS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 GSPAHSPR 8 0 H7C4E4;Q04727-4;Q04727;Q04727-3 H7C4E4 TLE4 Transducin-like enhancer protein 4 2 GS(1)PAHS(1)PR 82.749 0.017421000000000002 662070000.0 439790.0 349070.0 199380.0 492370.0 180690.0 369420.0 301360.0 495370.0 280630.0 217510.0 True False 415393.97200037 332300.15323524794 212232.3538192795 539164.696763562 194909.2750145337 367114.31275060866 331824.40979017137 493651.6770902268 229674.66610660715 215583.0306202195 1.9268398389488557 1.5414021793795192 0.9844576041476905 2.5009607445095163 0.9041030476925357 1.7028905832450851 1.5391954034393724 2.2898447789235563 1.065365235129346 1.0 17.71788409685212 -7.962023073050443 24.99163129966572 0.9999973382643597 1.6467910440200149 0.2261167947609677 0.47303838630719114 195.9399796032467 128942.79690938335 0.4306207318661287 0.11118579487154824 1.091382352315762e-08 7.962023073050443 0.6467937057556552 GS(ph)PALLPS(ph)TPTMPLFPHVLDLLAPLDSSR ddPTM_KYSE-520_SHP099_60min_R1 1 GSPALLPSTPTMPLFPHVLDLLAPLDSSR 29 0 Q9UGR2 Q9UGR2 ZC3H7B Zinc finger CCCH domain-containing protein 7B 2 GS(1)PALLPS(0.414)T(0.365)PT(0.221)MPLFPHVLDLLAPLDSSR 132.34 2.1894e-05 520870000.0 14185.0 8631.4 13057.0 15270.0 24054.0 14739.0 21855.0 24511.0 39047.0 18316.0 True False 13398.129772903549 8216.734588004461 13898.675111938659 16721.256208907085 25946.912951461563 14647.008433845558 24064.316684245387 24425.97706191042 31957.04909476779 18153.734489632363 0.7380371118986702 0.45261951984023213 0.765609694240941 0.9210918127317897 1.4292878948009238 0.8068316985802837 1.32558492017103 1.3455070126678423 1.7603567526570651 1.0 14.14797874184581 -5.486469899497204 0.790715588703992 1.347971207650288 0.5134897480636945 0.544034476565348 0.2548883296715628 0.587013119630777 0.726309813871519 0.12874926905517828 0.3199116492028851 3.262346605987003e-06 5.486469899497204 -0.8344814595865936 GS(ph)PAT(ph)SPHLGR ddPTM_KYSE-520_SHP099_60min_R1 1 GSPATSPHLGR 11 0 Q13671;Q13671-2;E9PNR2 Q13671 RIN1 Ras and Rab interactor 1 2 GS(1)PAT(0.8)S(0.2)PHLGR 148.13 0.00016598 553370000.0 724510.0 684500.0 670630.0 682670.0 687960.0 667100.0 538550.0 649120.0 749640.0 697370.0 True False 684319.9860251227 651615.5925445536 713859.8828459381 747550.7515477801 742098.5380430482 662936.3814518192 592991.8897414943 646868.3542257469 613524.2728865661 691191.8443456497 0.9900579580376377 0.9427420156576602 1.0327955815534082 1.0815387329338142 1.0736505994881809 0.9591206650874478 0.8579266300557682 0.9358738236243749 0.8876323959918663 1.0 19.39872666909169 -6.505381217139998 8.808370418608256 0.9140257093678994 1.022699584746756 0.48745440728271294 0.05033122199741583 0.20660792937845968 93.40917690055316 0.019275184877517313 0.0162490404612693 3.123336545827235e-07 6.505381217139998 0.10867387537885653 GS(ph)PATS(ph)PHLGR ddPTM_KYSE-520_SHP099_60min_R1 1 GSPATSPHLGR 11 0 Q13671;Q13671-2;E9PNR2 Q13671 RIN1 Ras and Rab interactor 1 2 GS(1)PAT(0.086)S(0.914)PHLGR 94.71700000000001 0.0015551999999999999 421190000.0 260910.0 249920.0 281480.0 260490.0 236260.0 318750.0 212590.0 247470.0 309350.0 196440.0 True False 246436.80218880967 237913.46806243228 299624.6511839238 285246.89128082595 254852.3178644844 316760.5630156906 234080.6718784594 246611.58432993217 253179.83807889002 194699.69442800744 1.2657277296340732 1.2219509062989498 1.5389066329259888 1.4650608061755301 1.308950785018921 1.6269186448714055 1.2022652247408305 1.2666254307919307 1.3003607366857288 1.0 17.570891094254936 -8.271364286676617 0.7582705221064243 1.0016415932236764 1.389391638812087 0.4247795272411421 0.1303397284640777 1.0390171426304569 1.2035772797831579 0.13454511049124987 0.04848569109036454 5.353474191402527e-09 8.271364286676617 0.38775004558841064 GS(ph)PDGSLQTGKPSAPK ddPTM_KYSE-520_SHP099_60min_R1 10 GSPDGSLQTGKPSAPK 16 1 E7EV54;C9JFV4;Q8IZL8 E7EV54 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 GS(1)PDGSLQTGKPSAPK;GS(0.966)PDGS(0.034)LQTGKPSAPK;GS(0.815)PDGS(0.185)LQTGKPSAPK;GS(0.995)PDGS(0.005)LQTGKPSAPK;GS(0.999)PDGS(0.001)LQTGKPSAPK;GS(0.986)PDGS(0.014)LQTGKPSAPK;GS(0.998)PDGS(0.002)LQTGKPSAPK;GS(0.996)PDGS(0.004)LQTGKPSAPK;GS(0.988)PDGS(0.012)LQTGKPSAPK;GS(0.998)PDGS(0.002)LQTGKPSAPK 234.36 1.3645e-19 73631550000.0 47510350.0 40548650.0 37653360.0 39596200.0 42315190.0 41940180.0 43281480.0 42059400.0 44697300.0 40634500.0 True False 44874856.17596537 38600631.98923552 40080555.833106086 43359410.942968324 45645154.71250335 41678415.77970014 47656794.3849386 41913505.75813774 36581397.04723961 40274509.943162665 1.1142247600106105 0.9584382787949648 0.9951841968945048 1.076596860002995 1.1333509650873468 1.0348584213319723 1.1832991748923616 1.0406956116235333 0.908301481479602 1.0 25.263363698658704 -7.612982620180768 6.450561450376847 0.956753091802541 1.0680471945913792 0.33177879144544387 0.06515416508381985 0.2618210791594927 15.303659300646917 0.04705241035304538 0.017296457849225188 2.4379083778839866e-08 7.612982620180768 0.11129410278883822 GS(ph)PDGSLQTGKPSAPKK ddPTM_KYSE-520_SHP099_60min_R1 1 GSPDGSLQTGKPSAPKK 17 2 E7EV54;C9JFV4;Q8IZL8 E7EV54 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 GS(0.986)PDGS(0.012)LQT(0.003)GKPSAPKK 73.294 0.01119 544970000.0 328520.0 284650.0 285820.0 239700.0 266480.0 270850.0 260380.0 245000.0 303880.0 256940.0 True False 310296.34071161586 270974.9867316395 304244.41452816926 262481.0159315669 287450.4599362049 269159.52468329377 286701.7514639126 244150.15218342992 248703.05219141152 254663.7114962951 1.2184552674915763 1.064050253330191 1.1946908836777692 1.0306965778097739 1.1287452705659118 1.0569213929296306 1.125805281715937 0.9587159110691822 0.9765939981402876 1.0 17.958233870742216 -7.260415245287411 24.975405449395065 0.9757412090839134 1.1128153550400162 0.5613843481370341 0.0560451931831959 63.89443335626658 1558232.7500501014 0.026416735834666465 0.014112617348483592 5.4901568827544955e-08 7.260415245287411 0.1370741459561028 GS(ph)PEEELPLPAFEK ddPTM_KYSE-520_SHP099_60min_R1 16 GSPEEELPLPAFEK 14 0 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK;GS(1)PEEELPLPAFEK 331.73 7.7095e-54 59597464000.0 27257063.0 24595521.0 23926738.0 22561112.0 24333181.0 24642288.0 23531471.0 23586902.0 28724032.0 24937610.0 True False 25745059.37978204 23413915.252530336 25469093.815614387 24705313.301234353 26248063.907838967 24488486.3399994 25910261.733705666 23505084.542186316 23508471.862721365 24716682.176566977 1.04160660382606 0.9472919983867516 1.0304414497735763 0.9995400323048454 1.061957414847687 0.9907675376922587 1.048290444025302 0.9509805715133832 0.9511176174368956 1.0 24.558981761472346 -7.276467413188871 24.907436250239567 0.9632868167080006 1.0149878805269335 0.3113959532016636 0.03364216533879435 923.373282196176 1530389.0379308118 0.017492773105293565 0.008454706615116242 5.2909369568657815e-08 7.276467413188871 0.0517010638189328 GS(ph)PGEAPSNIYVEVEDEGLPATLGHPVLR ddPTM_KYSE-520_SHP099_60min_R1 2 GSPGEAPSNIYVEVEDEGLPATLGHPVLR 29 0 Q9NP31-3;Q9NP31-4;Q9NP31;Q9NP31-2 Q9NP31-3 SH2D2A SH2 domain-containing protein 2A 1 GS(0.999)PGEAPS(0.001)NIYVEVEDEGLPATLGHPVLR;GS(1)PGEAPSNIYVEVEDEGLPATLGHPVLR 168.01 2.5922000000000006e-10 213084000.0 111491.0 120363.0 102161.0 91083.0 99972.0 97267.0 78968.0 100557.0 119687.0 83351.0 True False 105306.37197820155 114580.58081145359 108746.46152337943 99739.50093489754 107839.2276371296 96659.92057363839 86950.85609341059 100208.19123718026 97954.85786374036 82612.57498609669 1.274701484561208 1.3869629512303299 1.3163427183050638 1.2073162100525645 1.305360929075004 1.1700388299227544 1.0525135684009852 1.2129895630785608 1.1857136504972239 1.0 16.334073779708287 -4.161851520136051 0.10795533151048818 0.8667817556656511 1.810051040838128 0.6608078966208284 0.06563214106280421 31.40196508010559 0.5352288047781559 0.9988246807205344 4.666943791889973 6.888877782228014e-05 4.161851520136051 0.943269285172477 GS(ph)PGGYLGAK ddPTM_KYSE-520_SHP099_60min_R1 3 GSPGGYLGAK 10 0 O60551 O60551 NMT2 Glycylpeptide N-tetradecanoyltransferase 2 1 GS(1)PGGYLGAK;GS(1)PGGYLGAK;GS(1)PGGYLGAK 170.52 4.4618e-05 8583500000.0 9268500.0 8068700.0 7582900.0 7910700.0 7280000.0 8277900.0 8319000.0 8383800.0 8536600.0 8220300.0 True False 8754357.828703323 7681067.540634378 8071705.867068977 8662530.549561316 7852894.582466132 8226234.555568906 9159965.705615988 8354718.554593632 6986568.630173751 8147474.537296622 1.0744872891137711 0.9427544088015032 0.990700348938705 1.0632166458338626 0.9638440165130933 1.0096668014010655 1.1242705532474504 1.0254365958860394 0.8575134046987687 1.0 22.957921507546278 -7.728999630006679 24.804346641373893 0.9287566798402813 1.0225861369538785 0.2891265212188032 0.05987569565843248 193.494502755193 147951.81191383218 0.040208243005922406 0.015194638978309801 1.8663812808809253e-08 7.728999630006679 0.09382945711359714 GS(ph)PHSEGGKRS(ph)PEPNK ddPTM_KYSE-520_SHP099_60min_R1 2 GSPHSEGGKRSPEPNK 16 2 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9J7T7;A0A384DVL6;Q9Y618-2 C9JE98 NCOR2 Nuclear receptor corepressor 2 2 GS(1)PHS(0.021)EGGKRS(0.979)PEPNK;GS(1)PHS(0.01)EGGKRS(0.99)PEPNK 112.58 0.00012251 1406500000.0 1328230.0 1274770.0 1170510.0 1073250.0 1034340.0 1052570.0 997430.0 1021550.0 1307040.0 897030.0 True False 1254550.4341391404 1213528.1357312193 1245962.947482219 1175251.3573156206 1115736.6734104406 1046000.5201989819 1098259.9583787182 1018006.4814815635 1069714.4837970978 889083.0120787786 1.4110610787690756 1.3649210695116654 1.4014022656546028 1.3218690958538815 1.2549296952617728 1.1764936524355718 1.2352726837180927 1.1450072351527074 1.2031660365391326 1.0 19.761958601617025 -1.054884680289366 0.08737715624834241 0.7976491610749294 2.559447862771025 0.9140975992170707 0.035725470763074696 43.35318527814472 0.27695925838952085 0.7662410831687161 9.166452891813371 0.08812828520151682 1.054884680289366 1.7617987016960954 GS(ph)PHSVINIFTK ddPTM_KYSE-520_SHP099_60min_R1 1 GSPHSVINIFTK 12 0 Q5VT06 Q5VT06 CEP350 Centrosome-associated protein 350 1 GS(0.999)PHS(0.001)VINIFTK 184.87 7.277e-08 177850000.0 447070.0 418010.0 437460.0 443110.0 457830.0 405790.0 400370.0 418140.0 487390.0 449990.0 True False 422270.13588805014 397928.17215419817 465659.3715607481 485223.0411741203 493858.61630363524 403257.3140898426 440843.30683465215 416689.56993460946 398892.2621020531 446003.4386869224 0.9467867268720047 0.8922087536493832 1.0440712585797425 1.0879356504574589 1.1072977772494381 0.9041574102591483 0.9884302868438364 0.9342743436270001 0.8943703736375459 1.0 18.766695307805364 -6.295849739653997 24.998125437479477 0.94290012061001 1.0143954063278042 0.22568928342866723 0.0660939697249952 1107.3349461661983 804443.3482561163 0.025869506312858538 0.022815614116145664 5.059997011570996e-07 6.295849739653997 0.07149528571779418 GS(ph)PHY(ph)FSPFRPY ddPTM_KYSE-520_SHP099_60min_R1 2 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 2 GS(0.999)PHY(0.606)FS(0.394)PFRPY(0.001);GS(0.999)PHY(0.654)FS(0.346)PFRPY(0.001) 48.625 0.054363 0.0 35323.0 35096.0 29088.0 20186.7 36407.0 30218.0 28840.0 36081.0 38414.0 33051.0 True False 33363.56277534525 33409.93547983 30963.05902244557 22105.237898647327 39272.02377250608 30029.398253202038 31755.428651275994 35955.8434323687 31438.985938136357 32758.193853288918 1.018479923672457 1.0198955299385544 0.9452004332447921 0.6748002651687087 1.1988458200226193 0.916698838394202 0.969388873925592 1.0976137327167914 0.9597289178682813 1.0 14.999568194686614 -5.79442380213948 24.999984491195672 1.0205262915233788 0.9243005562623009 0.17148484588737667 0.11659706760415461 398.0529790061212 301695.50086295075 0.03662627222049457 0.041532978298031556 1.6053738995430167e-06 5.79442380213948 -0.09622573526107792 GS(ph)PHYFS(ph)PFRPY ddPTM_KYSE-520_SHP099_60min_R1 24 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 2 GS(1)PHY(0.002)FS(0.998)PFRPY;GS(0.981)PHY(0.023)FS(0.996)PFRPY;GS(1)PHY(0.007)FS(0.994)PFRPY;GS(0.977)PHY(0.036)FS(0.979)PFRPY(0.008);GS(1)PHYFS(1)PFRPY;GS(1)PHYFS(1)PFRPY;GS(1)PHYFS(1)PFRPY;GS(1)PHYFS(1)PFRPY;GS(1)PHYFS(1)PFRPY;GS(1)PHYFS(1)PFRPY;GS(1)PHYFS(1)PFRPY;GS(1)PHYFS(1)PFRPY;GS(1)PHY(0.002)FS(0.999)PFRPY;GS(1)PHY(0.005)FS(0.995)PFRPY;GS(1)PHYFS(1)PFRPY;GS(1)PHY(0.015)FS(0.985)PFRPY;GS(1)PHY(0.001)FS(0.999)PFRPY;GS(1)PHY(0.009)FS(0.991)PFRPY;GS(1)PHYFS(1)PFRPY;GS(0.999)PHY(0.001)FS(1)PFRPY;GS(1)PHYFS(1)PFRPY;GS(1)PHYFS(1)PFRPY;GS(1)PHYFS(1)PFRPY;GS(1)PHYFS(1)PFRPY 190.19 5.5388e-08 94947670500.0 9526940.1 8996121.7 8732369.7 8176322.4 7802309.100000001 8696756.0 7663274.600000001 8130597.2 9989304.8 8009951.4 True False 8998461.741168758 8563934.51007804 9295272.223147534 8953397.622595029 8416306.437103868 8642476.319906157 8437953.182920791 8102394.056008856 8175498.858201633 7938989.462243887 1.1334517804770357 1.078718462948749 1.1708382115071236 1.1277754763594847 1.0601231399953353 1.0886116376659651 1.0628497774244277 1.020582543224435 1.0297908691128177 1.0 22.92052395067328 -6.756274503803017 0.6618389296300224 1.0033903685759074 1.1284915203288695 0.7408261101990617 0.02622352756428488 0.3956951232813395 0.34776506909858124 0.02363461911312288 0.016186868874762384 1.752772279733874e-07 6.756274503803017 0.1251011517529621 GS(ph)PHYFSPFRPY ddPTM_KYSE-520_SHP099_60min_R1 10 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GS(1)PHYFSPFRPY;GS(0.984)PHY(0.014)FS(0.002)PFRPY;GS(1)PHYFSPFRPY;GS(1)PHYFSPFRPY;GS(0.987)PHYFS(0.013)PFRPY;GS(1)PHYFSPFRPY;GS(0.662)PHY(0.088)FS(0.029)PFRPY(0.221);GS(1)PHYFSPFRPY;GS(1)PHYFSPFRPY;GS(0.739)PHY(0.015)FS(0.245)PFRPY 168.98 3.7468000000000003e-06 65846900000.0 11323116.0 12260077.0 12412260.0 14881018.0 10278257.0 10730803.0 10709289.0 9758526.0 12867197.0 9966801.0 True False 10695000.18340788 11671084.498169258 13212374.139918173 16295305.47657878 11087097.35061739 10663828.078087749 11791888.444708554 9724675.950963095 10530838.380440213 9878502.897193832 1.082653950169513 1.1814628815348773 1.3374874996160995 1.6495723740899804 1.1223459127361173 1.0794984006247548 1.193691854669421 0.9844281114424297 1.066035864951934 1.0 23.235860984975098 -5.975577229477846 24.999724066443296 1.0750513512567568 1.3152749677909334 0.39513822158675316 0.1457011550785506 258.1794634685536 264277.32701056224 0.0482130666148978 0.054666540737758965 1.0578467850789198e-06 5.975577229477846 0.24022361653417668 GS(ph)PIDVLHGLIR ddPTM_KYSE-520_SHP099_60min_R1 2 GSPIDVLHGLIR 12 0 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3 M0QXA7 WIZ Protein Wiz 1 GS(1)PIDVLHGLIR;GS(1)PIDVLHGLIR 145.43 1.7772000000000002e-05 69679000.0 28787.0 26173.0 25236.0 24173.0 24895.0 26835.0 24877.0 26939.0 27635.0 27145.0 True False 27190.12772453821 24915.609793526077 26862.752939027643 26470.39465212254 26854.094866826123 26667.512811062155 27391.80993612321 26845.554896609865 22617.180621658703 26904.516418490442 1.010615738324569 0.9260753624399855 0.9984477149184477 0.9838643534930981 0.9981259075286829 0.9911909359848072 1.0181119597190704 0.9978084898102813 0.8406462420604884 1.0 14.71556075558891 -7.662493575348663 22.733234799714516 0.9198312883432268 0.989620296913538 0.3016282361462115 0.042710088619648534 6.7763970997812395 1541.6129425319891 0.02674997254009504 0.010110497665301529 2.1752362127172847e-08 7.662493575348663 0.06978900857031123 GS(ph)PLAEGPQAFFPER ddPTM_KYSE-520_SHP099_60min_R1 13 GSPLAEGPQAFFPER 15 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER;GS(1)PLAEGPQAFFPER 243.9 7.413500000000001e-19 8826320000.0 1493420.0 1422981.0 1535467.0 1410196.0 1555602.0 1933255.0 1900231.0 2020334.0 2401054.0 2236914.0 True False 1410577.015541037 1354618.8568219726 1634445.6596540627 1544220.6038491114 1678019.0272353666 1921188.8384404702 2092324.8939473934 2013325.9329035024 1965083.1192457422 2217096.68225276 0.636227110361182 0.61098772447107 0.7372008955393529 0.696505757376377 0.7568542412549892 0.8665336310405632 0.9437228925088699 0.90809117573429 0.8863317215598597 1.0 21.080240253361282 -6.017781400757857 0.7082925175939955 0.9528195589533166 0.6211754482416851 0.9098413820745771 0.038347301626225974 0.20925313663346276 0.23363400537857903 0.026756410340606843 0.03532389964030042 9.59883661004478e-07 6.017781400757857 -0.33164411071163147 GS(ph)PLLGPVVPGPSPIPSVTEK ddPTM_KYSE-520_SHP099_60min_R1 2 GSPLLGPVVPGPSPIPSVTEK 21 0 P49454 P49454 CENPF Centromere protein F 1 GS(1)PLLGPVVPGPSPIPSVTEK;GS(1)PLLGPVVPGPSPIPSVTEK 153.86 4.5217e-07 205380000.0 450110.0 494200.0 367480.0 344260.0 386790.0 524040.0 436440.0 489620.0 533920.0 535280.0 True False 425141.5010279605 470457.8901906769 391168.348788789 376978.3668944564 417228.17246594373 520769.2719772319 480559.6144439293 487921.6224981667 436973.5870279003 530537.8356415388 0.8013405877337088 0.8867565300442487 0.7373052825078518 0.7105588735977808 0.7864249153152698 0.9815874325862272 0.9057970650911735 0.9196735646726503 0.8236426465220932 1.0 19.0170961159557 -6.242538683336529 23.70607850883539 0.9198482895172609 0.7834321517847821 0.5671662011652416 0.061751771321298075 344.4321509768904 432001.52689061576 0.021222181903257503 0.021179090388803175 5.720859957255278e-07 6.242538683336529 -0.13641613773247885 GS(ph)PLNAAPYGIESMSQDTEVR ddPTM_KYSE-520_SHP099_60min_R1 4 GSPLNAAPYGIESMSQDTEVR 21 0 B4DSN5;P18031 B4DSN5 PTPN1 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 1 1 GS(1)PLNAAPYGIESMSQDTEVR;GS(1)PLNAAPYGIESMSQDTEVR;GS(1)PLNAAPYGIESMSQDTEVR;GS(1)PLNAAPYGIESMSQDTEVR 195.05 2.5384e-13 487280000.0 182190.0 181878.0 151650.0 192394.0 170273.0 210415.0 216843.0 265844.0 275375.0 199138.0 True False 172083.55751323942 173140.3078755564 161425.60164857918 210679.06791463477 183672.51637915583 209101.72193551887 238763.60662373938 264921.8492124562 225373.8416388372 197373.7922470194 0.8718662977193625 0.8772203538495423 0.8178674575323053 1.0674115621741889 0.9305820914120352 1.0594198933656886 1.2097026859823383 1.3422341750463929 1.1418630562500156 1.0 17.59057091253212 -6.249406161642337 1.2155831240967796 1.202330508374783 0.8834396016050502 0.594382042306136 0.10042970991054727 0.29358828194276443 0.8908194646063341 0.05008712567040852 0.04560905066701852 5.631107760481716e-07 6.249406161642337 -0.31889090676973286 GS(ph)PLPK ddPTM_KYSE-520_SHP099_60min_R1 4 GSPLPK 6 0 F2Z2A4;H7C1J2;H7C1M5;Q9H147 F2Z2A4 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 1 GS(1)PLPK;GS(1)PLPK;GS(1)PLPK;GS(1)PLPK 94.806 0.013890000000000001 3169730000.0 7511800.0 6289300.0 5723700.0 6332000.0 7081100.0 6709400.0 6687800.0 6714400.0 7108700.0 7222000.0 True False 7095105.47959795 5987152.587568233 6092658.860243802 6933791.376214778 7638342.284052328 6667524.145874433 7363868.090638124 6691109.313552748 5817939.275743999 7158018.69863097 0.9912108054362792 0.8364259496434852 0.8511655412983307 0.9686746665723188 1.0671028682159247 0.9314762124258843 1.0287578729078375 0.934771142024605 0.8127862640058103 1.0 22.77112888178299 -5.2782470646183866 23.60937336925741 0.9663673094557702 0.8872832869816967 0.15560153685514277 0.07461330478213998 657.860105875853 924079.3766554883 0.021452815654580723 0.03193570817006453 5.269300123448821e-06 5.2782470646183866 -0.07908402247407353 GS(ph)PLPVLSWANR ddPTM_KYSE-520_SHP099_60min_R1 2 GSPLPVLSWANR 12 0 C9J2U0;P24864-3;I3L1Q9;I3L413;P24864-2;P24864 C9J2U0 CCNE1 G1/S-specific cyclin-E1 1 GS(1)PLPVLSWANR;GS(1)PLPVLSWANR 201.09 1.7124e-08 0.0 171545.0 137281.0 296472.0 118510.0 211680.0 176856.0 154666.0 125571.0 293434.0 145309.0 True False 162029.05688352062 130685.81469701804 315583.0594919718 129773.15476866919 228338.0117055535 175752.1761025977 170301.14867469663 125135.42350949167 240153.78246918062 144021.6753086913 1.125032440681119 0.9074037947198599 2.1912191954132005 0.9010668324092029 1.5854419913956794 1.2203175371061077 1.1824688770608922 0.8688652124152877 1.6674836058839262 1.0 17.13592642851484 -6.504302632245673 23.19031850255342 1.1734359294518864 1.3467970998515373 0.03692410228028087 0.3972316221128136 1152.4485532446847 1438715.884904199 0.13769130248220085 0.11908028922998624 3.1311030970211444e-07 6.504302632245673 0.17336117039965093 GS(ph)PMALLLAAR ddPTM_KYSE-520_SHP099_60min_R1 4 GSPMALLLAAR 11 0 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 GS(1)PMALLLAAR;GS(1)PMALLLAAR;GS(1)PMALLLAAR;GS(1)PMALLLAAR 130.56 0.0001473 305620000.0 129902.0 134939.0 149803.0 105493.0 117415.0 106420.0 91288.0 116564.0 168209.0 118925.0 True False 122696.07710678306 128456.32789243167 159459.54107327454 115519.02300237291 126654.89250003578 105755.79330550527 100516.28192502382 116159.66669024205 137666.48580382077 117871.4170222499 1.040931552418874 1.0898004888512007 1.3528261991045234 0.9800427102744261 1.0745174334854046 0.8972132173955487 0.8527621408509067 0.9854778166306024 1.1679378197161596 1.0 16.846854391909442 -5.396504628727446 18.714031689967427 0.9867706611230539 1.1561849075759798 0.321226602235105 0.11094600451195917 3.2376209423574625 469.04061932199625 0.032483763896211715 0.04818116061780529 4.013242209108223e-06 5.396504628727446 0.1694142464529259 GS(ph)PNLTLPK ddPTM_KYSE-520_SHP099_60min_R1 2 GSPNLTLPK 9 0 Q12923-3;Q12923;Q12923-4;Q12923-2 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 GS(0.996)PNLT(0.004)LPK;GS(0.997)PNLT(0.003)LPK 124.6 0.00068084 1822370000.0 2022630.0 2019960.0 1652400.0 1679950.0 1835910.0 1668460.0 1644600.0 1651440.0 2163100.0 1652750.0 True False 1910430.6818870578 1922918.089578225 1758916.3479334787 1839611.9429046137 1980385.6721010134 1658046.5222561865 1810852.2177492576 1645711.5400889944 1770335.56731355 1638107.9208200425 1.1662422588926191 1.1738653266602883 1.0737487595157704 1.123010223882989 1.2089470094922838 1.0121717264062569 1.1054535508519723 1.0046417083833803 1.0807197406305893 1.0 20.643598976182833 -6.2726980203252705 24.986254637912683 1.0449409630409567 1.1448925038117623 0.5870380766440604 0.045384937519075866 578.433338774152 1283710.6810678043 0.015769076402604398 0.014028797890176099 5.337058702798573e-07 6.2726980203252705 0.09995154077080559 GS(ph)PPTSSNIVQGQIK ddPTM_KYSE-520_SHP099_60min_R1 2 GSPPTSSNIVQGQIK 15 0 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 GS(0.999)PPT(0.001)SSNIVQGQIK;GS(0.897)PPT(0.083)S(0.019)S(0.001)NIVQGQIK 146.2 0.00020247 442500000.0 406440.0 415190.0 272760.0 276120.0 326530.0 390100.0 333750.0 353400.0 396940.0 349160.0 True False 383893.96298194746 395243.64918710437 290342.5460314305 302362.36178149463 352226.0532984428 387665.2411997522 367488.70708610804 352174.13788418047 324865.70204310515 346066.7140423694 1.109306233176031 1.1421024708510805 0.8389785386753014 0.8737111935719886 1.0177981267950529 1.1202037799922295 1.0619013391768037 1.0176481111704472 0.9387372112399444 1.0 18.4006906589469 -8.33295964957983 0.004050311793213386 7.090196977586571e-07 2.0049648769622697 0.014807088818262981 0.0968609475403327 121612.8200884001 239.71761889867594 59824.98604734081 58827.34018950404 4.6455843547015066e-09 8.33295964957983 2.004964167942572 GS(ph)PQQIDHAK ddPTM_KYSE-520_SHP099_60min_R1 7 GSPQQIDHAK 10 0 A0A087WTP3;Q92945;M0R3J3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 1 GS(1)PQQIDHAK;GS(1)PQQIDHAK;GS(1)PQQIDHAK;GS(1)PQQIDHAK;GS(1)PQQIDHAK;GS(1)PQQIDHAK;GS(1)PQQIDHAK 198.37 1.7386000000000002e-06 5447810000.0 6956280.0 6286380.0 6011440.0 5785870.0 6273910.0 5907130.0 5647170.0 5958540.0 7232820.0 5953110.0 True False 6570401.2813996095 5984372.868751246 6398947.041044076 6335757.3452147525 6767631.0233351635 5870261.410531385 6218041.054668043 5937871.215473692 5919522.212554576 5900370.0768494895 1.11355748805978 1.014236868333284 1.0844992699950784 1.0737898238067363 1.1469841611949787 0.9948971562925794 1.0538391615578415 1.006355726528297 1.0032459210957345 1.0 22.492374013848067 -6.290071467628809 24.997353772521866 1.0147005445286534 1.0817627257770848 0.5314393195532294 0.03498070932479122 654.1634393761059 571117.8518559134 0.012312888899229161 0.010860642329783475 5.127769943136212e-07 6.290071467628809 0.06706218124843133 GS(ph)PRPQAPK ddPTM_KYSE-520_SHP099_60min_R1 10 GSPRPQAPK 9 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK;GS(1)PRPQAPK 91.93700000000001 0.0059977 123167700000.0 63963430.0 53330910.0 53412160.0 53852360.0 55239000.0 56278360.0 53386350.0 55825500.0 63563370.0 53491940.0 True False 60415251.029963434 50768813.03227205 56855193.29607755 58970472.10309757 59585995.03308329 55927105.87984236 58783163.25856613 55631854.37026961 52021864.310161844 53018043.02769959 1.139522464048685 0.9575761407441535 1.0723744229181227 1.1122717613754265 1.1238814492257332 1.0548692989407948 1.1087388349633072 1.0493004115826081 0.9812105717101386 1.0 25.65998008344842 -7.619707163929361 4.1180983378342315 0.9914636383126308 1.0781547972526344 0.3537401684916519 0.04830434164424793 0.2598108145712168 7.899148214144663 0.03734855509524802 0.012670649793513794 2.4004509494518813e-08 7.619707163929361 0.08669115894000357 GS(ph)PRYS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 GSPRYSPR 8 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 GS(1)PRY(0.084)S(0.916)PR;GS(1)PRY(0.396)S(0.605)PR;GS(1)PRY(0.001)S(0.999)PR;GS(0.998)PRY(0.007)S(0.995)PR;GS(0.996)PRY(0.067)S(0.937)PR 87.001 0.016141 9051490000.0 11378440.0 11687030.0 12177410.0 9004680.0 10201460.0 10172490.0 8734710.0 8662070.0 14115200.0 9316740.0 True False 10747255.250842215 11125567.536210325 12962385.333144883 9860482.079844229 11004256.863632536 10108999.716616428 9617699.729354603 8632023.300912336 11552235.495235637 9234200.931914037 1.1638533025309161 1.2048219026466702 1.4037365472897587 1.0678219103686297 1.1916847970679372 1.0947346490673628 1.041530263448694 0.9347883335611061 1.2510270872827027 1.0 23.13855569442556 -5.935682170740259 1.2574047898109735 1.0547715196096932 1.2395124529650416 0.3224500386422259 0.10662092109873259 0.5148144407255347 1.70600485562337 0.04511821498005419 0.054579094904050995 1.1596256933120675e-06 5.935682170740259 0.18474093335534847 GS(ph)PSAAFTFPDTDDFGK ddPTM_KYSE-520_SHP099_60min_R1 2 GSPSAAFTFPDTDDFGK 17 0 Q9ULT0;Q9ULT0-4;H7C055;Q9ULT0-3 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 GS(0.944)PS(0.056)AAFTFPDTDDFGK;GS(0.984)PS(0.016)AAFTFPDTDDFGK 376.67 1.1310999999999998e-72 350340000.0 357980.0 348760.0 314810.0 313820.0 324490.0 285620.0 318760.0 310640.0 417900.0 293920.0 True False 338122.13578456204 332005.04610056715 335103.1563138092 343645.3584465767 350025.51690445543 283837.3396346403 350983.3715978066 309562.46234392084 342019.8944017069 291316.0974662998 1.16067096437634 1.1396728467398696 1.1503077215037005 1.1796305162516139 1.2015316693748697 0.9743276877017597 1.2048196946562806 1.0626342486265519 1.17405079010875 1.0 18.152225898170975 GS(ph)PSFLK ddPTM_KYSE-520_SHP099_60min_R1 9 GSPSFLK 7 0 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 GS(0.952)PS(0.048)FLK;GS(0.996)PS(0.004)FLK;GS(0.997)PS(0.003)FLK;GS(0.944)PS(0.056)FLK;GS(0.944)PS(0.056)FLK;GS(0.966)PS(0.034)FLK;GS(0.996)PS(0.004)FLK;GS(0.858)PS(0.142)FLK;GS(0.984)PS(0.016)FLK 130.31 0.0020453 12682040000.0 18431040.0 15850510.0 14255350.0 15247720.0 16258820.0 14667210.0 14214660.0 14688850.0 17271380.0 14248880.0 True False 17408633.469832655 15089027.707499433 15174272.670366436 16696858.724405825 17538296.633968648 14575666.501864703 15651616.554512715 14637897.807753349 14135332.768058762 14122646.008660909 1.2326750567249627 1.06842780724277 1.0744638547946754 1.1822755250089994 1.241856279851031 1.0320775931738269 1.108263744974854 1.036484083703327 1.0008983273665624 1.0 23.751507080436763 -7.060627653185656 1.1426043975160511 0.9999758099718482 1.1457459949645987 0.474647884373278 0.06261560632072892 0.4984669221892546 1.1981454581418878 0.052079424030286606 0.02308195896285578 8.697057608578828e-08 7.060627653185656 0.14577018499275052 GS(ph)PSFLKK ddPTM_KYSE-520_SHP099_60min_R1 2 GSPSFLKK 8 1 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 GS(0.986)PS(0.014)FLKK;GS(0.988)PS(0.012)FLKK 112.71 0.0011137 3969000000.0 7198200.0 6424500.0 5980200.0 5048000.0 6028000.0 4923500.0 4686700.0 4865600.0 6828400.0 4360600.0 True False 6798901.496744051 6115857.3766289065 6365693.260658308 5527760.40226346 6502369.305371675 4892770.610220411 5160477.373784162 4848722.369239574 5588534.68995601 4321968.476495463 1.5731029815971835 1.4150629302109223 1.4728689705344706 1.2789913744918686 1.50449253406962 1.1320699437835307 1.1940108776472653 1.1218782357180073 1.2930530891996608 1.0 22.04325711885396 -1.0000000000000002 0.12880915169062115 0.9110522643915379 3.0807985615423688 0.7091182897558717 0.09665317391427532 44.780582161100696 0.3919263979541606 0.5215795102529128 17.620377327854502 0.09999999999999995 1.0000000000000002 2.169746297150831 GS(ph)PSPAAPGPPAGPLPR ddPTM_KYSE-520_SHP099_60min_R1 2 GSPSPAAPGPPAGPLPR 17 0 Q6F5E8-2;Q6F5E8 Q6F5E8-2 RLTPR Leucine-rich repeat-containing protein 16C 1 GS(0.971)PS(0.029)PAAPGPPAGPLPR;GS(0.643)PS(0.357)PAAPGPPAGPLPR 250.46 1.0772e-23 958100000.0 282230.0 304020.0 263600.0 223410.0 238220.0 266050.0 254120.0 291960.0 355510.0 280790.0 True False 266574.1392884438 289414.42285667633 280592.077774912 244642.81922933392 256966.55871361025 264389.4832637631 279808.92957220046 290947.2589039761 290958.34567779605 278302.4190513144 0.9578577872127366 1.0399278017174298 1.0082272325601862 0.8790538726299242 0.9233356993071261 0.950007851764357 1.0054132138916416 1.0454356088451038 1.045475445990098 1.0 18.086293923308155 -6.939567426307885 3.908869633560712 1.033197587146766 0.960460762056681 0.3623131613045758 0.04262656419537704 0.27279053892791494 8.473973156549503 0.021831182198221576 0.013887118720753948 1.149297795555243e-07 6.939567426307885 -0.07273682509008506 GS(ph)PSPASVSSGR ddPTM_KYSE-520_SHP099_60min_R1 1 GSPSPASVSSGR 12 0 Q96II5;P10398 Q96II5 ARAF Serine/threonine-protein kinase A-Raf 1 GS(0.97)PS(0.03)PASVSSGR 76.32600000000001 0.0283 0.0 222990.0 186870.0 227010.0 253590.0 191100.0 202600.0 171040.0 214570.0 290110.0 228620.0 True False 210620.30018045587 177892.48470241134 241643.42782884237 277691.11735538667 206138.48278973557 201335.49824934607 188330.3923895369 213825.7067510146 237433.3370779592 226594.60466366843 0.9295027147406134 0.7850693751797619 1.066412980960031 1.225497481581965 0.9097237028026522 0.8885273263597157 0.8311336126871748 0.9436487116204442 1.0478331442638653 1.0 17.789753984678924 GS(ph)PSQEWVIHAS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 1 GSPSQEWVIHASPVK 15 0 Q5T7B8-4;Q5T7B8-2;Q5T7B8 Q5T7B8-4 KIF24 Kinesin-like protein KIF24 2 GS(0.998)PS(0.002)QEWVIHAS(1)PVK 108.64 0.00024811 0.0 124560.0 105790.0 99226.0 96178.0 102090.0 110490.0 104770.0 99061.0 121630.0 97479.0 True False 117650.40849579603 100707.6896059726 105622.26672721343 105318.72820302976 110123.90218735793 109800.39092581547 115361.17405666402 98717.38051201115 99545.05804278443 96615.4118975144 1.217718852356544 1.042356365595161 1.0932237895880745 1.0900820700816085 1.1398171370854662 1.1364686934449666 1.19402455354674 1.021756038433355 1.0303227620493682 1.0 16.55996572279896 -7.296347234236222 20.61053106437442 1.0195289787495698 1.124731571472112 0.5335396055823686 0.048265242982387206 66.21357452267961 39092.410151095966 0.026550754767204664 0.012757982833328527 5.054203984191689e-08 7.296347234236222 0.10520259272254218 GS(ph)PTGGAQLLK ddPTM_KYSE-520_SHP099_60min_R1 8 GSPTGGAQLLK 11 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 GS(0.848)PT(0.152)GGAQLLK;GS(0.956)PT(0.044)GGAQLLK;GS(0.968)PT(0.032)GGAQLLK;GS(0.734)PT(0.266)GGAQLLK;GS(0.996)PT(0.004)GGAQLLK;GS(0.998)PT(0.002)GGAQLLK;GS(0.989)PT(0.011)GGAQLLK;GS(0.972)PT(0.028)GGAQLLK 164.48 1.7786e-05 24769790000.0 14820500.0 13156650.0 12366310.0 10826780.0 11627560.0 12151050.0 11794160.0 12945660.0 14313320.0 12916610.0 True False 13998377.321065709 12524584.78546574 13163462.129395572 11855753.916009888 12542582.8202335 12075210.78974687 12986428.792709196 12900754.526999744 11714381.897434425 12802178.88437052 1.093437097504985 0.9783166520783676 1.0282204496818992 0.9260731335729052 0.9797225092320849 0.9432152838052305 1.0143920741932153 1.0076999113603675 0.9150303243876612 1.0 23.609886036792876 GS(ph)PTGGAQLLKR ddPTM_KYSE-520_SHP099_60min_R1 1 GSPTGGAQLLKR 12 1 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 GS(0.712)PT(0.288)GGAQLLKR 65.956 0.031313 610350000.0 729030.0 709160.0 718610.0 507460.0 512280.0 539160.0 447320.0 410000.0 808500.0 496180.0 True False 688589.2526147249 675090.889129139 764932.7504166529 555688.8458265883 552593.521525515 535794.9024487531 492539.47102249647 408577.8056947192 661696.7806264175 491784.2312221984 1.4001857092965755 1.372737973829256 1.555423500496583 1.1299444157564225 1.1236503459092035 1.089491830832351 1.001535713738566 0.8308070486101357 1.3455022317042309 1.0 18.90766595092783 -5.390068769483771 4.6722207873688895 1.0602062592107757 1.4340982271796547 0.6321686529846064 0.12919517296102148 0.14302240404114497 4.796226745494508 0.03651970312380873 0.05501608355927376 4.073157752266971e-06 5.390068769483771 0.373891967968879 GS(ph)PTRPNPPVR ddPTM_KYSE-520_SHP099_60min_R1 9 GSPTRPNPPVR 11 1 Q14195-2;Q14195;H0YBT4 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GS(0.966)PT(0.034)RPNPPVR;GS(0.952)PT(0.048)RPNPPVR;GS(0.637)PT(0.363)RPNPPVR;GS(0.977)PT(0.023)RPNPPVR;GS(0.827)PT(0.173)RPNPPVR;GS(0.972)PT(0.028)RPNPPVR;GS(0.97)PT(0.03)RPNPPVR;GS(0.992)PT(0.008)RPNPPVR;GS(0.973)PT(0.027)RPNPPVR 83.137 0.0062405 96876300000.0 21143620.0 18609030.0 17545010.0 16711330.0 17441840.0 17415160.0 17593510.0 17206940.0 21827190.0 18109510.0 True False 19970741.24983847 17715024.266076516 18675989.41760856 18299569.778755438 18814413.577505603 17306465.52661441 19372033.686910942 17147253.14126999 17863922.514682934 17949073.830385577 1.1126335229637565 0.9869603542488725 1.0404987797193415 1.019527244228976 1.0482108300014408 0.9641982472274803 1.079277620114107 0.9553280187773141 0.9952559493315754 1.0 24.097406067324904 -4.252599409288089 24.60074581281958 1.0117128708640803 1.1126335881239997 0.4168269648744226 0.03639284291747515 918.5813639130675 2556253.0383071173 0.008608639197300974 0.10026572175524437 5.589855620556173e-05 4.252599409288089 0.10092071725991936 GS(ph)PTSAYPER ddPTM_KYSE-520_SHP099_60min_R1 11 GSPTSAYPER 10 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 GS(1)PTSAYPER;GS(0.999)PT(0.001)SAYPER;GS(0.772)PT(0.162)S(0.066)AYPER;GS(0.997)PT(0.003)SAYPER;GS(0.995)PT(0.005)SAYPER;GS(0.993)PT(0.007)SAYPER;GS(0.845)PT(0.126)S(0.029)AYPER;GS(0.918)PT(0.063)S(0.018)AYPER;GS(0.987)PT(0.013)SAYPER;GS(0.993)PT(0.007)SAYPER;GS(0.979)PT(0.021)S(0.001)AYPER 218.07 3.6328e-09 56366330000.0 13419870.0 12136710.0 11584630.0 10825220.0 11849400.0 11358340.0 11480880.0 11225840.0 13112400.0 11406100.0 True False 12675443.05925238 11553644.234026885 12331393.78586335 11854045.654078929 12781880.366136538 11287448.386897713 12641479.392991062 11186900.181170754 10731518.696704831 11305050.827811519 1.1212194666183688 1.0219895876632241 1.0907862311885346 1.0485619069413497 1.130634489027849 0.9984429578263813 1.118215175281813 0.9895488619697222 0.9492676203015609 1.0 23.43046414271113 -7.390631934200522 5.934601944615033 0.9732537256841376 1.0721021557028243 0.5166010589160194 0.042598439390395516 0.17434943420813995 7.610525923900334 0.021930666183891404 0.010268799001800112 4.067879370415655e-08 7.390631934200522 0.0988484300186867 GS(ph)PTSAYPERK ddPTM_KYSE-520_SHP099_60min_R1 4 GSPTSAYPERK 11 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 GS(0.818)PT(0.147)S(0.035)AYPERK;GS(0.498)PT(0.251)S(0.251)AYPERK;GS(0.746)PT(0.189)S(0.065)AYPERK;GS(0.908)PT(0.02)S(0.072)AYPERK 87.083 0.0022156999999999997 1082310000.0 905780.0 929780.0 936040.0 705160.0 822360.0 795300.0 739130.0 706730.0 1027050.0 741660.0 True False 855534.5777723363 885111.973171767 996378.6361169524 772178.1943859158 887075.0534116547 790336.2376984445 813848.4736136498 704278.5185820215 840563.6098235782 735089.4694027484 1.1638509506433934 1.204087407062041 1.3554521967598019 1.050454708612955 1.2067579394551697 1.0751565225666795 1.107142065679287 0.9580854411562167 1.1434847658837042 1.0 19.48756032875072 -6.161700806120216 0.8736796928747528 1.0371110619457238 1.2250380365794367 0.42397617863679127 0.08304424235077523 0.5595312444029921 0.9302249502704095 0.04870341985963815 0.050378432769107105 6.891268857068368e-07 6.161700806120216 0.18792697463371288 GS(ph)PTSAYPERR ddPTM_KYSE-520_SHP099_60min_R1 3 GSPTSAYPERR 11 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 GS(0.982)PT(0.016)S(0.002)AYPERR;GS(0.977)PT(0.021)S(0.003)AYPERR;GS(0.661)PT(0.277)S(0.062)AYPERR 126.32 0.00011764 909920000.0 326492.0 315602.0 335606.0 232141.0 300285.0 237217.0 246666.0 278898.0 441853.0 240671.0 True False 308380.83791433414 300440.00619173987 357239.69974858564 254203.6108442635 323915.7211120662 235736.44071182178 271601.40650817123 277930.56793328276 361623.6334076994 238538.84217920495 1.2927908725349628 1.259501402149135 1.4976164740508187 1.0656696767786364 1.3579160448373473 0.9882518023405269 1.1386045309305546 1.1651375742173022 1.5159947541626182 1.0 17.863864679270016 -5.2706676399738885 24.896701903925162 1.1810263852039584 1.3409227700490765 0.1941102997690518 0.1619520466564933 1085.5763902155593 2928747.7697838503 0.0446097317094417 0.06726956479027593 5.3620685279803455e-06 5.2706676399738885 0.15989638484511803 GS(ph)PVFLPR ddPTM_KYSE-520_SHP099_60min_R1 10 GSPVFLPR 8 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR;GS(1)PVFLPR 168.26 0.00014936 10049420000.0 6081910.0 5658900.0 5788420.0 5588910.0 6224410.0 5668860.0 5872290.0 6470550.0 6663550.0 6239020.0 True False 5744534.328312994 5387037.949817926 6161550.814999467 6120078.326032937 6714235.654951639 5633478.541983154 6465918.381227523 6448105.17228772 5453617.294425694 6183747.136684111 0.9289730322629857 0.8711607752943465 0.9964105385951233 0.9897038463501411 1.0857875502574301 0.9110137296144315 1.0456311097957862 1.0427504601595603 0.8819276037457877 1.0 22.560049895684205 -4.772625070939569 24.80637930169395 0.9976629176000779 0.900066909128359 0.2881636641040213 0.058944073729850895 198.97433385901962 441266.08711098996 0.014826435175638333 0.0313270633220967 1.6880096655179727e-05 4.772625070939569 -0.0975960084717189 GS(ph)PVPPVPER ddPTM_KYSE-520_SHP099_60min_R1 1 GSPVPPVPER 10 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 GS(1)PVPPVPER 68.069 0.031789 370430000.0 845450.0 803590.0 838220.0 706210.0 766530.0 746720.0 683190.0 731800.0 912680.0 780920.0 True False 798551.2031372082 764984.3301868195 892253.0023994201 773327.9860702209 826851.5500409001 742059.4434982808 752253.5124918603 729261.5566034035 746960.3187904999 774001.6563465669 1.0317176928361107 0.9883497327353138 1.1527791899193367 0.9991296268285448 1.06828137028 0.958731079466859 0.9719016830566464 0.9421963772605539 0.9650629461392795 1.0 19.561977128145543 -6.267752812414312 24.855101750376217 0.9642358906222903 1.047835077666092 0.45332020876812484 0.04410938569066193 429.98792412621935 1692798.4456467053 0.014985091265257053 0.013542705723082707 5.398177834240773e-07 6.267752812414312 0.08359918704380176 GS(ph)RPASPAAK ddPTM_KYSE-520_SHP099_60min_R1 1 GSRPASPAAK 10 1 A0A590UJ53;Q9P2N6-8;Q9P2N6-6;Q9P2N6-2;Q9P2N6-5;Q9P2N6-4;Q9P2N6-3;Q9P2N6 A0A590UJ53 KANSL3 KAT8 regulatory NSL complex subunit 3 1 GS(0.548)RPAS(0.452)PAAK 69.86399999999999 0.037614 1410900000.0 1765400.0 1371500.0 1216000.0 1100100.0 1231800.0 1451300.0 1323300.0 1205100.0 1516900.0 1212800.0 True False 1667469.7427623519 1305611.0813365309 1294385.3056687925 1204653.173242874 1328735.652016728 1442241.8983675996 1457072.0781634387 1200919.7893724537 1241469.197937185 1202055.5355441216 1.3871819507969374 1.0861487200302553 1.076809903864281 1.0021609964115148 1.10538624275397 1.1998130333593575 1.2121503833047793 0.9990551633114406 1.0327885536296977 1.0 20.19707212011808 -4.26144683304145 10.370146184019099 1.085535538094349 1.3877684098898997 0.6109279698193466 0.0735456286993938 0.05212848305224316 223.98803341360457 0.019707320440089524 0.11051675605477519 5.4771314869353404e-05 4.26144683304145 0.3022328717955507 GS(ph)S(ph)GSVDETLFALPAASEPVIR ddPTM_KYSE-520_SHP099_60min_R1 1 GSSGSVDETLFALPAASEPVIR 22 0 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 2 GS(0.671)S(0.728)GS(0.601)VDETLFALPAASEPVIR 85.087 0.003589 19563000.0 50332.0 44158.0 43241.0 42202.0 46978.0 46935.0 42228.0 44972.0 58433.0 42774.0 True False 47539.983625645524 42036.58339749069 46028.38404804623 46212.86539150603 50674.901331743655 46642.06125534572 46496.81834556463 44816.00262854368 47823.040176058734 42395.05563766842 1.1213567929229413 0.9915444800157494 1.0857017016661152 1.0900531841841823 1.1953021542143822 1.100176908693659 1.0967509688618442 1.0571044654727197 1.1280334335395352 1.0 15.371608398513434 -4.986322256270909 24.97546182408678 1.1010520346117805 1.0519937406774829 0.06430836886939939 0.05509951843682634 486.03051390976043 887475.4386024518 0.013930400673228583 0.02897649447249181 1.0319953578236927e-05 4.986322256270909 -0.049058293934297614 GS(ph)SGEGLPFAEEGNLTIK ddPTM_KYSE-520_SHP099_60min_R1 3 GSSGEGLPFAEEGNLTIK 18 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 GS(0.625)S(0.375)GEGLPFAEEGNLTIK;GS(0.5)S(0.5)GEGLPFAEEGNLTIK;GS(0.99)S(0.01)GEGLPFAEEGNLTIK 319.99 8.0228e-48 274640000.0 659520.0 720110.0 557170.0 494210.0 525990.0 691300.0 559240.0 659500.0 813480.0 681290.0 True False 622935.1108794753 685514.8346928536 593086.0697035203 541179.5698103452 567382.4205262858 686985.3402752845 615773.4368564347 657212.3484284575 665772.5381620014 675254.3006355991 0.9225192794671916 1.0151950665809852 0.8783151312701956 0.8014455728766883 0.840249991732335 1.0173727729370154 0.9119133877071548 0.9732812479829316 0.9859582346018786 1.0 19.365071397598886 -6.264505224019813 24.997532714231326 0.9719232219364263 0.892673939082609 0.35208504394901785 0.05816632114208846 393.04293783709824 3204683.0172007824 0.022445431813740372 0.020622920155854887 5.438695896096552e-07 6.264505224019813 -0.07924928285381738 GS(ph)SGPQPAKPCSGATPTPLLLVGDR ddPTM_KYSE-520_SHP099_60min_R1 1 GSSGPQPAKPCSGATPTPLLLVGDR 25 1 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 GS(0.5)S(0.5)GPQPAKPCSGATPTPLLLVGDR 49.567 0.057794000000000005 52604000.0 43454.0 53811.0 46619.0 27452.0 45477.0 43190.0 39229.0 49462.0 48278.0 47666.0 True False 41043.51999659861 51225.83878804227 49624.1353330373 30061.029826255257 49055.78117126536 42920.435189482974 43194.65015814519 49290.427866517566 39511.93218934103 47243.71632358686 0.8687614605819496 1.0842889335203991 1.050385939013481 0.6362968912174044 1.0383556796266218 0.9084898168363303 0.9142940801331471 1.0433224077655565 0.836342592498684 1.0 15.527834835197462 -9.592201824423476 14.156848178276729 0.9999999947053466 0.9357955044746119 0.02443344004503678 0.12749653584561846 0.0 0.0 0.12060488501483484 0.029250981169508042 2.5573971424593555e-10 9.592201824423476 -0.06420449023073471 GS(ph)SGSVDETLFALPAASEPVIR ddPTM_KYSE-520_SHP099_60min_R1 1 GSSGSVDETLFALPAASEPVIR 22 0 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 GS(0.333)S(0.333)GS(0.333)VDETLFALPAASEPVIR 92.671 0.0024178 87872000.0 30523.0 38915.0 26732.0 40532.0 38306.0 28687.0 31483.0 37127.0 36760.0 27550.0 True False 28829.828343908 37045.46498739413 28455.18749271227 44384.14909360982 41320.46426867408 28507.953792097647 34665.608884470275 36998.21510250694 30085.310644189405 27305.92843357565 1.055808390256328 1.356682124085649 1.0420882615997586 1.6254400285849506 1.5132415061143283 1.0440206734389583 1.2695268343941415 1.3549517348406126 1.1017867682974 1.0 14.736926590518145 -7.932636183411209 4.47077114255591 1.0018056668887314 1.2872388704125286 0.20592850565286036 0.18670739511764692 0.29248355554726835 10.79447749068955 0.18173871958765114 0.04762329087443182 1.167787484774589e-08 7.932636183411209 0.2854332035237972 GS(ph)SGSVVVDLLYWR ddPTM_KYSE-520_SHP099_60min_R1 4 GSSGSVVVDLLYWR 14 0 Q9NQC3-2;F8W914 Q9NQC3-2 RTN4 Reticulon-4;Reticulon 1 GS(0.898)S(0.102)GSVVVDLLYWR;GS(0.893)S(0.107)GSVVVDLLYWR;GS(0.993)S(0.007)GSVVVDLLYWR;GS(0.998)S(0.002)GSVVVDLLYWR 249.33 1.7342e-26 321622000.0 354000.0 378294.0 314494.0 388716.0 340475.0 367166.0 349059.0 364153.0 392046.0 282592.0 True False 334362.9143184957 360120.18840912986 334766.78644819144 425659.45176827314 367268.445462246 364874.3808006879 384345.2902075508 362889.8382369489 320860.3290754047 280088.4547332492 1.1937761398874382 1.2857373530519183 1.1952180848261553 1.5197322294975097 1.3112587800594113 1.3027112493736563 1.372228250441789 1.2956258357116437 1.1455678506312794 1.0 18.0955229910789 -7.952373753760767 2.505923430857691 1.001738849720211 1.3153181852283302 0.5701464642590205 0.08689750334038862 0.18951693381031293 2.658777764153104 0.08445865717556159 0.023094932047730915 1.1159024889242161e-08 7.952373753760767 0.3135793355081191 GS(ph)SPDVHALLEITEESDAVLVDK ddPTM_KYSE-520_SHP099_60min_R1 3 GSSPDVHALLEITEESDAVLVDK 23 0 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 1 GS(0.495)S(0.495)PDVHALLEIT(0.009)EESDAVLVDK;GS(0.494)S(0.494)PDVHALLEIT(0.009)EES(0.002)DAVLVDK;GS(0.5)S(0.5)PDVHALLEITEESDAVLVDK 115.46 0.00013445 39753000.0 33513.0 40091.0 38321.0 55345.0 36513.0 34285.0 39614.0 41333.0 47189.0 38850.0 True False 31653.9670834908 38164.96818218217 40791.2329757679 60604.97215991901 39386.36536944859 34071.01459762498 43618.569715383084 41189.62547019475 38620.667137885044 38505.81922484262 0.8220567104067418 0.9911480641232393 1.0593524250862014 1.5739172254987055 1.022867871982266 0.8848276775694085 1.132778644720845 1.0696987182555677 1.0029826118585299 1.0 15.232788870354698 -7.747583473067735 5.102894215109885 0.9996712972355272 1.0782197335415922 0.01862877637264715 0.1904537889864775 0.9285421799860638 65.54590000457742 0.16489307772477024 0.05162027153140916 1.7882017968208905e-08 7.747583473067735 0.078548436306065 GS(ph)SPGPRPVEGTPASR ddPTM_KYSE-520_SHP099_60min_R1 1 GSSPGPRPVEGTPASR 16 1 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 GS(0.822)S(0.178)PGPRPVEGTPASR 135.69 5.0628000000000004e-05 473100000.0 577280.0 498080.0 522460.0 438100.0 454160.0 521300.0 476090.0 445980.0 623720.0 497010.0 True False 545257.1276208506 474151.4891666781 556138.6075655571 479736.8922804319 489899.80818307935 518046.3733335829 524217.8233906376 444432.99947251496 510468.17070168175 492606.87806792906 1.1068808656497509 0.9625352594067799 1.1289704474830073 0.9738737188608185 0.994504603964388 1.0516425904677396 1.0641707347787974 0.9022062404318052 1.036258715476745 1.0 18.91007724617384 -1.0000000000786962 0.2671776233833322 0.9918259373528848 1.543058143437251 0.1318794127065871 0.0610623882654374 114.26486699699026 1.5907915531933603 0.07059371491592017 28.947359296493648 0.09999999998187954 1.0000000000786962 0.5512322060843662 GS(ph)SPLGPAGLGAEEPAAGPQLPSWLQPER ddPTM_KYSE-520_SHP099_60min_R1 2 GSSPLGPAGLGAEEPAAGPQLPSWLQPER 29 0 H0YKL4;O43482 H0YKL4 OIP5 Protein yippee-like;Protein Mis18-beta 1 GS(0.5)S(0.5)PLGPAGLGAEEPAAGPQLPSWLQPER;GS(0.5)S(0.5)PLGPAGLGAEEPAAGPQLPSWLQPER 208.88 2.3664e-22 307460000.0 81581.0 129131.0 131174.0 53584.0 61222.0 96342.0 68181.0 78691.0 99017.0 97842.0 True False 77055.53930230843 122927.35293041752 139629.68592582073 58676.607249382985 66039.82309446983 95740.69384174954 75073.4008624359 78418.0392876174 81038.00881544348 96975.19599992422 0.7945901888393053 1.2676164421520073 1.4398494840467229 0.6050681995984709 0.6809970571703865 0.9872699184008286 0.7741505452847403 0.8086401731807655 0.8356570768416576 1.0 16.56532816618995 -5.267309954004359 24.995240217126476 0.8052669445261504 1.1773784794014435 0.42742252397518943 0.1876253320116264 428.1301643287318 1822857.290127511 0.05290916729005675 0.08089640420912282 5.403685267218226e-06 5.267309954004359 0.372111534875293 GS(ph)SPLPTATTPKPLIPTEASIR ddPTM_KYSE-520_SHP099_60min_R1 1 GSSPLPTATTPKPLIPTEASIR 22 1 A0A3B3IUD2;Q9BUK6-7;Q9BUK6-3;Q9BUK6-2;Q9BUK6 A0A3B3IUD2 MSTO1 Protein misato homolog 1 1 GS(0.5)S(0.5)PLPTATTPKPLIPTEASIR 108.64 0.00021093 294840000.0 155510.0 155160.0 137660.0 109320.0 88941.0 143280.0 121040.0 144730.0 152600.0 183080.0 True False 146883.55029850078 147705.88070009186 146533.7838637878 119709.73993174364 95940.15069493401 142385.7363729826 133275.90443656218 144227.9654102361 124891.68673295158 181458.05363408462 0.8094628337339916 0.8139946270885557 0.807535300468269 0.6597102610454633 0.528718063340413 0.7846757612649562 0.734472247262813 0.7948281298171308 0.6882675319817949 1.0 17.469276563660287 -11.668919829590184 17.076701476598544 0.9946952462232795 0.7496924637091038 0.0 0.11743046493132367 0.0 0.0 0.0 0.026647695077690776 2.1432862135041844e-12 11.668919829590184 -0.24500278251417573 GS(ph)VHS(ph)LDAGLLLPSGDPFSK ddPTM_KYSE-520_SHP099_60min_R1 3 GSVHSLDAGLLLPSGDPFSK 20 0 Q15276-2;Q15276;I3L456 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 2 GS(1)VHS(1)LDAGLLLPSGDPFSK;GS(1)VHS(1)LDAGLLLPSGDPFSK;GS(1)VHS(1)LDAGLLLPSGDPFSK 143.29 1.302e-06 1200400000.0 2605130.0 2012100.0 2009210.0 2111940.0 2115550.0 2124820.0 1958420.0 2095490.0 2386350.0 2095550.0 True False 2460618.2457020977 1915435.6957763273 2138726.8914496666 2312658.142622088 2282031.7491670614 2111558.21021804 2156396.2059373087 2088221.2342810428 1953048.9949880706 2076985.0573132304 1.1847067637959474 0.9222192952385118 1.0297266626541381 1.1134688400761643 1.0987232388272825 1.0166458361282258 1.0382338564952431 1.0054098496896975 0.9403288618332756 1.0 20.986059406201175 -7.214433015789742 1.566970162430885 0.9713815298225511 1.0581264459395072 0.23129699199336728 0.06607045465335792 0.6696314471136321 2.9989237700842937 0.05104850756474159 0.0205057366962843 6.103331852497128e-08 7.214433015789742 0.08674491611695612 GS(ph)VHSLDAGLLLPSGDPFSK ddPTM_KYSE-520_SHP099_60min_R1 2 GSVHSLDAGLLLPSGDPFSK 20 0 Q15276-2;Q15276;I3L456 Q15276-2 RABEP1 Rab GTPase-binding effector protein 1 1 GS(0.978)VHS(0.022)LDAGLLLPSGDPFSK;GS(0.827)VHS(0.173)LDAGLLLPSGDPFSK 108.5 0.00012429 110710000.0 456390.0 358390.0 324490.0 364570.0 345290.0 404320.0 344260.0 371650.0 424050.0 376970.0 True False 431073.13690909103 341172.4064456424 345407.1446023573 399218.6231880329 372462.35856864374 401796.4889051112 379061.16045382345 370360.8328937619 347053.2094305909 373630.33907822164 1.1537423271691098 0.9131282199602533 0.9244622517927923 1.0684855629576007 0.9968739676963616 1.0753850715024318 1.0145352794128017 0.9912493557334614 0.9288678491334542 1.0 18.511252082216096 -8.353480190534523 0.004459021023694619 1.2150833261604407e-05 1.989137715448656 0.033142851646744464 0.07102495369106411 62208.87470617715 132.2870368241716 29783.18782824106 29222.015580810516 4.431184259802034e-09 8.353480190534523 1.9891255646153945 GS(ph)VPLSSSPPAT(ph)HFPDETEITNPVPK ddPTM_KYSE-520_SHP099_60min_R1 1 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 2 GS(0.386)VPLS(0.469)S(0.226)S(0.217)PPAT(0.702)HFPDETEITNPVPK 84.516 0.0091807 108440000.0 92397.0 90244.0 75670.0 83688.0 87383.0 83232.0 75020.0 78003.0 104830.0 81311.0 True False 87271.55422114699 85908.54278099447 80547.8092762807 91641.68235828538 94259.54495874145 82712.51821465718 82603.75372464373 77732.42579903701 85795.5145492486 80590.64779900068 1.082899276834317 1.0659865024941484 0.9994684430031283 1.1371255209022124 1.1696089749003142 1.0263289906906892 1.024979398734502 0.9645340733940705 1.064584004377645 1.0 16.298324809408907 -6.495765797670834 24.25736701957732 1.012723898295062 1.0881892399736248 0.3831669739955208 0.04768656268738073 585.65108636263 523970.5487139191 0.017888482723617743 0.015727054944897203 3.193259422400964e-07 6.495765797670834 0.07546534167856289 GS(ph)VPLSSSPPATHFPDETEITNPVPK ddPTM_KYSE-520_SHP099_60min_R1 1 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GS(0.249)VPLS(0.249)S(0.227)S(0.227)PPAT(0.048)HFPDETEITNPVPK 49.638000000000005 0.05967000000000001 6677200000.0 120330.0 199770.0 106140.0 136030.0 104460.0 151540.0 126680.0 164270.0 169690.0 162330.0 True False 113655.05502809209 190172.74933911674 112981.95423000454 148958.25030108917 112680.40770390259 150594.18264909118 139486.05067765774 163700.18571090634 138878.57353679286 160891.88249082913 0.7064063970696002 1.181990951904964 0.7022228373544236 0.9258282518360106 0.7003486189573634 0.9359961504439174 0.8669551783360386 1.0174545985577443 0.8631794928790703 1.0 17.295732013763235 -7.219977705473975 18.55073743379688 0.9552372935576435 0.8656006414857224 0.09322815716948618 0.142260408975887 65.60413786419201 29351.771909404462 0.06319500102419531 0.036480279313856584 6.025905192907597e-08 7.219977705473975 -0.08963665207192117 GS(ph)WACSIFDLK ddPTM_KYSE-520_SHP099_60min_R1 2 GSWACSIFDLK 11 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0C4DGY6;A0A1B0GVW2 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 GS(1)WACSIFDLK;GS(1)WACSIFDLK 111.79 0.0010877 644329000.0 462560.0 447040.0 396384.0 575040.0 453170.0 511830.0 459220.0 548640.0 523060.0 585360.0 True False 436900.8747095007 425563.5273792799 421935.54687682394 629691.6287079202 488831.9008154084 508635.47911630134 505642.4391553043 546736.8958935381 428085.48926957865 580174.1658031881 0.7530512395440064 0.7335099569456586 0.7272566959142347 1.0853493068519873 0.842560613050865 0.8766944636567034 0.871535599064976 0.9423668410616669 0.7378568617872545 1.0 19.146126530576964 GS(ph)YGDLGGPIITTQVTIPK ddPTM_KYSE-520_SHP099_60min_R1 11 GSYGDLGGPIITTQVTIPK 19 0 P61978;P61978-2;P61978-3;Q5T6W2;S4R359 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 GS(1)YGDLGGPIITTQVTIPK;GS(0.604)Y(0.357)GDLGGPIIT(0.017)T(0.021)QVTIPK;GS(1)YGDLGGPIITTQVTIPK;GS(0.548)Y(0.451)GDLGGPIIT(0.001)TQVTIPK;GS(1)YGDLGGPIITTQVTIPK;GS(1)YGDLGGPIITTQVTIPK;GS(1)YGDLGGPIITTQVTIPK;GS(1)YGDLGGPIITTQVTIPK;GS(1)YGDLGGPIITTQVTIPK;GS(1)YGDLGGPIITTQVTIPK;GS(1)YGDLGGPIITTQVTIPK 316.32 5.7823e-51 11036909000.0 2049020.0 2434550.0 2200620.0 2237820.0 2316130.0 2597340.0 2264480.0 2381350.0 2711260.0 2233470.0 True False 1935356.775979896 2317590.56366595 2342475.4863164914 2450501.739974885 2498396.254022978 2581129.0376256458 2493395.73759506 2373089.6526612667 2218963.529302639 2213683.193413368 0.8742699866622247 1.04693868145259 1.0581800924749911 1.1069794211141644 1.1286150888513542 1.1659884509696703 1.126356176445642 1.0720096081147472 1.0023853168804742 1.0 21.078017337967964 -3.970833757675837 1.436824938486151 1.0942276713514865 0.6306005202322359 0.5921962205518033 0.05118793943592535 1.7159118173774728 1.8845794199848154 0.01513761643739725 1.3916148770898702 0.0001069464177969024 3.970833757675837 -0.46362715111925057 GS(ph)YHLDWDKMDDPNFIPFGGDTK ddPTM_KYSE-520_SHP099_60min_R1 3 GSYHLDWDKMDDPNFIPFGGDTK 23 1 A0A494BZT8;Q9Y6A5;H0Y8F2;A0A494C117 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 GS(1)YHLDWDKMDDPNFIPFGGDTK;GS(1)YHLDWDKMDDPNFIPFGGDTK;GS(0.52)Y(0.48)HLDWDKMDDPNFIPFGGDTK 158.8 1.9511e-10 655740000.0 987900.0 851000.0 873480.0 848580.0 863100.0 882130.0 857470.0 875880.0 1101170.0 930190.0 True False 933099.2176701735 810116.6826229583 929785.9184174142 929228.7880651206 931021.059632762 876624.2994604916 944151.4357007509 872841.7767119294 901225.2862367252 921949.2402768686 1.0120939167865213 0.8786998754721832 1.0085001188766012 1.0078958227527428 1.0098398251873053 0.9508379216161993 1.024081798057792 0.9467351764938904 0.9775215888958053 1.0 19.81432779687371 GS(ph)YPDAILQAQAADK ddPTM_KYSE-520_SHP099_60min_R1 5 GSYPDAILQAQAADK 15 0 P05120;E7EPJ9;E9PDK7;E7ERB5 P05120 SERPINB2 Plasminogen activator inhibitor 2 1 GS(1)YPDAILQAQAADK;GS(1)YPDAILQAQAADK;GS(1)YPDAILQAQAADK;GS(1)YPDAILQAQAADK;GS(1)YPDAILQAQAADK 223.06 2.0628e-14 2135210000.0 1297210.0 1179310.0 973640.0 1139720.0 1320080.0 1348990.0 1225960.0 1300750.0 1320080.0 1364030.0 True False 1225251.1753759757 1122654.1774196008 1036402.3922790815 1248038.646130687 1423962.7857722365 1340570.4530275664 1349892.0010165873 1296238.0018473307 1080386.7485087472 1351945.7553992814 0.9062872311871063 0.8303988328940298 0.7666005741280589 0.9231425455839339 1.0532691715516986 0.991585977228535 0.9984808899510265 0.9587943870310847 0.7991346873156664 1.0 20.366605836338927 -5.511048236318983 23.236297379117072 0.9695031095981085 0.8358334443308062 0.4209350325410093 0.06942673527379763 216.24124361725725 424719.2010369524 0.020650249079318023 0.028799631308625725 3.082845525040584e-06 5.511048236318983 -0.13366966526730228 GSALGDLAPSRPPSFS(ph)PCPAEDLFPGHR ddPTM_KYSE-520_SHP099_60min_R1 4 GSALGDLAPSRPPSFSPCPAEDLFPGHR 28 1 O75427 O75427 LRCH4 Leucine-rich repeat and calponin homology domain-containing protein 4 1 GSALGDLAPS(0.007)RPPS(0.13)FS(0.863)PCPAEDLFPGHR;GSALGDLAPS(0.001)RPPS(0.043)FS(0.956)PCPAEDLFPGHR;GSALGDLAPS(0.024)RPPS(0.139)FS(0.838)PCPAEDLFPGHR;GSALGDLAPSRPPS(0.219)FS(0.781)PCPAEDLFPGHR 177.1 9.722700000000001e-11 565430000.0 265198.0 287520.0 235240.0 281925.0 245034.0 250697.0 242232.0 267258.0 336445.0 223365.0 True False 250486.9382808937 273707.10762368166 250403.9467973078 308719.06723615836 264316.78174725355 249132.30703166986 266719.1745165008 266330.94437648583 275355.0690882561 221386.15987534056 1.1314480472579649 1.2363334174900649 1.131073175208002 1.3944822359717235 1.1939173699750998 1.1253291857627992 1.2047689641786399 1.2030153308881326 1.2437772498664987 1.0 17.756205508194366 -5.994332409550489 24.998702687983414 1.1698723749619553 1.227238527779887 0.09769412809265565 0.09224730002720076 422.06827974869674 1861648.9875752546 0.028041643085724842 0.03169635856512791 1.01313563358728e-06 5.994332409550489 0.05736615281793167 GSAMQVS(ph)PLMFTDK ddPTM_KYSE-520_SHP099_60min_R1 6 GSAMQVSPLMFTDK 14 0 E9PEM5;A0A494C1L5;P50851-2;P50851;H0YAC6 E9PEM5 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 GSAMQVS(1)PLMFTDK;GSAMQVS(1)PLMFTDK;GSAMQVS(1)PLMFTDK;GSAMQVS(1)PLMFTDK;GSAMQVS(1)PLMFTDK;GSAMQVS(1)PLMFTDK 197.15 5.693899999999999e-11 977196000.0 1733170.0 2056060.0 1444250.0 1347370.0 1427720.0 2033940.0 1618010.0 1830810.0 2085680.0 2211610.0 True False 1637027.6051112607 1957283.7913910213 1537348.6658817017 1475423.6396984388 1540073.441384415 2021245.4260082634 1781574.2410558618 1824459.3474242657 1706973.0877141703 2192016.8560065413 0.7468134200818278 0.8929145713581961 0.7013398011375119 0.6730895502265407 0.7025828460964257 0.9220939248116036 0.8127557213686615 0.8323199442672631 0.7787226102010761 1.0 21.06382746159321 -6.253687389238502 24.994653073961018 0.8551720175144086 0.7454202487973334 0.3746921635178656 0.08024084965738652 771.7230882545891 2488259.778095475 0.0274943890327191 0.02700512202043542 5.575869627923214e-07 6.253687389238502 -0.10975176871707526 GSASYS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 4 GSASYSPPR 9 0 A0A087WTY1;P0DPB5 A0A087WTY1 POLR1D 1 GSAS(0.001)YS(0.999)PPR;GSAS(0.005)YS(0.995)PPR;GSAS(0.001)YS(0.999)PPR;GSASYS(1)PPR 130.53 0.00057149 3061180000.0 3862970.0 3753950.0 3360070.0 2971830.0 3167500.0 3690420.0 3216260.0 3464920.0 4153320.0 3468080.0 True False 3648683.353460225 3573604.6072061695 3576665.4885020875 3254271.82968673 3416764.229390312 3667386.719888206 3541390.9484727127 3452901.0012384052 3399181.7846769495 3437355.509325416 1.0614797752404384 1.0396377673217434 1.040528242946861 0.9467370543599617 0.9940095576732635 1.0669209832787805 1.0302661272204905 1.0045225150179593 0.9888944496590759 1.0 21.71286763983476 -5.026447839655383 24.877270586674246 1.0068090966082697 1.0479398578874957 0.3102557103652377 0.02925906792447667 931.1496601933243 875855.3985970229 0.008670009542914862 0.015086282591190004 9.409188310195253e-06 5.026447839655383 0.04113076127922599 GSDES(ph)IGKGDGFDFLPQLNSVFPPR ddPTM_KYSE-520_SHP099_60min_R1 1 GSDESIGKGDGFDFLPQLNSVFPPR 25 1 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 GS(0.216)DES(0.784)IGKGDGFDFLPQLNSVFPPR 53.895 0.043345 41212000.0 24012.0 20380.0 20319.0 18809.0 14953.0 16877.0 13851.0 19393.0 26873.0 20774.0 True False 22680.006493264722 19400.914208996335 21628.795251549476 20596.60170486793 16129.716029068131 16771.66438279472 15251.19425273316 19325.730209360216 21993.540613201894 20589.95852192744 1.1015081195579617 0.9422512526353648 1.050453561065493 1.0003226418806728 0.7833777815477705 0.8145555205919235 0.7407102950931774 0.9385997639955964 1.068168281630082 1.0 14.329653303241333 -5.622594203174556 7.652411737140599 0.8767968826889269 1.0228871768730985 0.29312207646742083 0.1001110322591069 0.29685839305146494 20.04014104226863 0.03106710147583171 0.04014359219228888 2.3845465054134273e-06 5.622594203174556 0.14609029418417163 GSDS(ph)DSEGDNPEK ddPTM_KYSE-520_SHP099_60min_R1 4 GSDSDSEGDNPEK 13 0 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 GSDS(1)DSEGDNPEK;GSDS(0.983)DS(0.017)EGDNPEK;GS(0.005)DS(0.993)DS(0.001)EGDNPEK;GSDS(0.916)DS(0.084)EGDNPEK 304.08 4.6318000000000005e-45 2060760000.0 4342360.0 3883690.0 3554320.0 3955280.0 3973410.0 3860960.0 3811230.0 4081070.0 4595510.0 4007320.0 True False 4101480.634519946 3697111.702862464 3783437.154313077 4331188.6220017085 4286094.761389659 3836862.3164896094 4196506.322420339 4066913.7206988987 3761081.2273797262 3971818.2624477823 1.0326455954186218 0.9308360701740618 0.9525705619726397 1.0904800612232572 1.0791266060467206 0.9660216210711008 1.0565705792978766 1.0239425502295036 0.9469419240400537 1.0 21.921368180643693 -5.216759758784242 24.998152117106102 1.0256213707219368 0.9678992560399904 0.18317458940421638 0.04922389257707977 704.9840712375008 394436.25329259376 0.0135078230290663 0.023395985548171957 6.07072054317418e-06 5.216759758784242 -0.057722114681946435 GSDS(ph)DSEGDNPEKK ddPTM_KYSE-520_SHP099_60min_R1 1 GSDSDSEGDNPEKK 14 1 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 GSDS(0.988)DS(0.012)EGDNPEKK 189.86 1.0151000000000001e-10 713160000.0 346770.0 306150.0 292530.0 284360.0 363380.0 331810.0 348860.0 343510.0 427030.0 346410.0 True False 327533.9768311431 291442.09445948136 311386.9518645492 311385.4889040488 391975.9386506238 329739.05071133014 384126.17334549775 342318.44398583664 349492.1165502776 343341.0769029023 0.9539609410725141 0.8488413244591235 0.9069318319654779 0.9069275710115787 1.1416517423036905 0.9603833415032399 1.1187888638624197 0.9970215246998982 1.0179152453963871 1.0 18.38928294431278 -5.661103098740276 9.656136497105358 1.0390693528044137 0.8995094762714235 0.5745389452032095 0.05693498184438056 0.204823396391928 18.04465514011446 0.01570182423475432 0.02027036303461755 2.1822118071821678e-06 5.661103098740276 -0.13955987653299018 GSDS(ph)LIK ddPTM_KYSE-520_SHP099_60min_R1 4 GSDSLIK 7 0 Q99623-2;Q99623 Q99623-2 PHB2 Prohibitin-2 1 GSDS(1)LIK;GSDS(1)LIK;GSDS(1)LIK;GSDS(1)LIK 104.48 0.0041848 2915110000.0 6233900.0 6661400.0 5770350.0 5893480.0 6190620.0 6130050.0 5943740.0 5844180.0 7484600.0 5782440.0 True False 5888093.140028447 6341376.345034755 6142315.993886439 6453594.567260624 6677786.574190441 6091790.084123405 6544591.2445123205 5823907.903621862 6125585.311411859 5731212.080270239 1.0273731032041673 1.1064633896318394 1.0717307103381202 1.126043579765124 1.165161309800207 1.0629147898913842 1.1419209676504816 1.0161738602678356 1.0688114879746387 1.0 22.45040885268189 -7.274411748606365 24.965055944006405 1.0318695003284615 1.10142835939099 0.39137313027594134 0.04099872929849818 844.423108281973 1625064.63488209 0.021880480967410014 0.010606404840032089 5.31604013839477e-08 7.274411748606365 0.06955885906252846 GSDSDS(ph)EGDNPEKK ddPTM_KYSE-520_SHP099_60min_R1 1 GSDSDSEGDNPEKK 14 1 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 1 GSDS(0.293)DS(0.707)EGDNPEKK 308.93 2.3130999999999998e-42 823130000.0 723160.0 608530.0 562150.0 623070.0 659010.0 629190.0 622280.0 658710.0 713900.0 593350.0 True False 683044.8732162794 579295.3053778484 598387.0884718024 682286.3854671745 710870.3377460173 625262.9918238197 685186.135267547 656425.0887540696 584273.755954483 588093.3806193148 1.1614564892687147 0.9850396628640825 1.0175035261264926 1.1601667489415812 1.208771193781177 1.0632035870993173 1.165097513163615 1.1161919354759535 0.9935050711490588 1.0 19.16568572653939 -7.763071647500466 24.99271535913716 0.9967524710336995 1.1077358125694448 0.31450903057731316 0.06663734516961344 57.19254986226049 875579.1542060105 0.057832439493755404 0.017955938738298247 1.725553196289074e-08 7.763071647500466 0.1109833415357453 GSEDS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 1 GSEDSPPK 8 0 P48651-3;P48651-2;P48651 P48651-3 PTDSS1 Phosphatidylserine synthase 1 1 GS(0.045)EDS(0.955)PPK 63.076 0.048119999999999996 348460000.0 943900.0 958640.0 910860.0 1137500.0 1023400.0 1103000.0 1225900.0 1365500.0 1481200.0 1052600.0 True False 891539.9853820003 912585.4954520251 969575.4930275282 1245607.6579981549 1103935.7576505276 1096115.7678629255 1349825.9356310412 1360763.3992100954 1212251.4180134197 1043274.7829104074 0.8545591247733269 0.8747316722313555 0.9293577386417013 1.1939401569002777 1.0581447723397428 1.0506491538165128 1.2938354858587235 1.3043192661227707 1.1619675255943798 1.0 19.99268776143976 -5.088221082012471 0.9125654418819742 1.185821011679564 0.7999392218502677 0.5831876284452986 0.09970872826630037 0.5759694615920343 0.7934577228008979 0.04136288873906864 0.17334493652927455 8.161667876047447e-06 5.088221082012471 -0.38588178982929633 GSEEDPLLS(ph)PVETWK ddPTM_KYSE-520_SHP099_60min_R1 10 GSEEDPLLSPVETWK 15 0 H0YK04;A0A0A0MSK6;Q13017-2;Q13017 H0YK04 ARHGAP5 Rho GTPase-activating protein 5 1 GSEEDPLLS(0.998)PVET(0.002)WK;GSEEDPLLS(1)PVETWK;GSEEDPLLS(1)PVETWK;GSEEDPLLS(1)PVETWK;GSEEDPLLS(1)PVETWK;GSEEDPLLS(1)PVETWK;GSEEDPLLS(1)PVETWK;GSEEDPLLS(1)PVETWK;GSEEDPLLS(1)PVETWK;GSEEDPLLS(1)PVETWK 325.77 2.2738e-43 3683382000.0 5873930.0 6313230.0 5311350.0 5068210.0 5616240.0 7307460.0 6449180.0 7757780.0 8281130.0 8246450.0 True False 5548091.393510849 6009932.954448576 5653728.1194604775 5549891.1545871 6058206.135965599 7261851.43157535 7101126.05233136 7730870.071859459 6777485.542299136 8173392.86864102 0.6787990596655761 0.7353045486785514 0.6917235241624347 0.6790192572145225 0.741210686104324 0.8884745353960661 0.8688100726904194 0.9458581272314226 0.8292132350938882 1.0 22.962503651203455 -6.218756050781814 2.7232887902118046 0.9050301301973177 0.6984685343857981 0.8372691505422466 0.04474655614913895 0.10559058206138178 1.5523360555431895 0.015496209332077382 0.014789553237828955 6.042879709735803e-07 6.218756050781814 -0.20656159581151956 GSEEDS(ph)PKKESK ddPTM_KYSE-520_SHP099_60min_R1 13 GSEEDSPKKESK 12 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 GSEEDS(1)PKKESK;GSEEDS(1)PKKESK;GSEEDS(1)PKKESK;GSEEDS(1)PKKESK;GSEEDS(1)PKKESK;GSEEDS(1)PKKESK;GSEEDS(1)PKKESK;GSEEDS(1)PKKESK;GSEEDS(0.995)PKKES(0.005)K;GSEEDS(1)PKKESK;GSEEDS(1)PKKESK;GSEEDS(1)PKKESK;GSEEDS(0.999)PKKES(0.001)K 213.69 8.424400000000001e-11 40187290000.0 25732730.0 23959790.0 17251580.0 19189100.0 24571180.0 29826450.0 21800420.0 18940980.0 29825240.0 53316690.0 True False 24305284.169974536 22808725.724021975 18363644.450303968 21012826.2945867 26504792.0751099 29640292.061990142 24004219.205195926 18875278.16123798 24409728.249116004 52844345.606357105 0.45994105691131204 0.4316209324253249 0.3475044347619823 0.3976362286915875 0.5015634458329143 0.5608980813724838 0.45424385390266336 0.3571863355417786 0.46191750449417135 1.0 25.65524577437984 -10.779450825163819 2.0441157791999833 1.1982297787893033 0.4402407135099571 0.8842521972346589 0.06063019137672143 393926.1845281956 208289.33436039454 388502.1807559425 0.017826723699031675 1.6616868186584024e-11 10.779450825163819 -0.7579890652793462 GSEGDCS(ph)PEDKNSVTAK ddPTM_KYSE-520_SHP099_60min_R1 3 GSEGDCSPEDKNSVTAK 17 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 GS(0.004)EGDCS(0.99)PEDKNS(0.005)VT(0.001)AK;GSEGDCS(0.999)PEDKNS(0.001)VTAK;GSEGDCS(1)PEDKNSVTAK 195.46 1.2398e-12 3182740000.0 6466300.0 6200500.0 5526700.0 5541900.0 5581500.0 5648000.0 5285500.0 5660800.0 6874300.0 5208400.0 True False 6107601.44875053 5902618.672859751 5882959.925032659 6068600.509767004 6020732.295609162 5612748.736980771 5819809.921508995 5641164.006040659 5626100.407000845 5162257.628073885 1.1831260446079999 1.1434180736659796 1.139609904984087 1.1755710286065846 1.1662982999660145 1.0872662972992633 1.1273768844582932 1.0927707240650562 1.0898526986341104 1.0 22.299570711815708 -8.162050802758092 0.30064312026311785 0.9759508910165637 1.1770125498960466 0.8457335803448449 0.02053049166470816 0.912264003250342 0.22456343586234254 0.06279375065780315 0.03129097226964891 6.885717441123215e-09 8.162050802758092 0.2010616588794829 GSEGYLAATYPTVGQT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 GSEGYLAATYPTVGQTSPR 19 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 GSEGYLAATYPTVGQT(0.5)S(0.5)PR 189.87 4.0336e-12 886020000.0 958440.0 1017100.0 878540.0 782040.0 733370.0 943760.0 738440.0 942650.0 1094500.0 872870.0 True False 905273.4225972292 968236.9893017755 935172.0941136994 856364.8464711013 791082.046695492 937869.6437700029 813088.721679898 939380.1671661648 895766.3900997101 865137.0508825845 1.0463930791932896 1.1191717986346923 1.0809525417500816 0.9898603297563847 0.9144008407551797 1.0840706022395168 0.9398380532314636 1.0858165954259384 1.0354040312871569 1.0 19.722569170153445 -5.248798329156382 19.937904186155492 1.00717908076414 1.0858726108278496 0.2888007471435591 0.05392456216141006 65.09496568736466 102664.6471472433 0.01456052603859233 0.024848779014767022 5.638994497983522e-06 5.248798329156382 0.0786935300637095 GSEGYLAATYPTVGQTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 GSEGYLAATYPTVGQTSPR 19 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 GSEGYLAATYPTVGQT(0.065)S(0.935)PR;GSEGYLAATYPTVGQT(0.044)S(0.956)PR;GSEGYLAATYPTVGQT(0.062)S(0.938)PR;GSEGYLAATYPTVGQT(0.141)S(0.859)PR;GSEGYLAATYPTVGQT(0.152)S(0.848)PR 284.9 1.3769999999999999e-43 5798300000.0 4936860.0 5289700.0 4039580.0 3622250.0 3696810.0 4759800.0 3968800.0 4489270.0 5288310.0 4320270.0 True False 4663002.534413579 5035574.871998426 4299977.790356527 3966507.550930829 3987727.9150283826 4730092.322641844 4370005.035755346 4473697.770173491 4328086.211446498 4281995.768919199 1.088978781403735 1.175987820574011 1.0041994486701389 0.926322155598953 0.9312778737366452 1.1046466596195978 1.0205533287713549 1.044769311227666 1.0107637758219767 1.0 22.02985193950759 -4.773438091831483 24.991434049639338 1.0055416581069827 1.1324832941407257 0.48730515276385455 0.052174586577995945 170.12742038844542 354350.5200481914 0.014685716659175388 0.030945634020790785 1.6848525834143035e-05 4.773438091831483 0.12694163603374298 GSESATYVPVAPPTPAWQPEIKPEPAWHDQDET(ph)S(ph)SVKSDGAGGAR ddPTM_KYSE-520_SHP099_60min_R1 2 GSESATYVPVAPPTPAWQPEIKPEPAWHDQDETSSVKSDGAGGAR 45 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 2 GSESATYVPVAPPT(0.069)PAWQPEIKPEPAWHDQDET(0.518)S(0.496)S(0.491)VKS(0.425)DGAGGAR;GSESATYVPVAPPT(0.103)PAWQPEIKPEPAWHDQDET(0.503)S(0.527)S(0.52)VKS(0.347)DGAGGAR 96.602 4.8426999999999996e-05 5112420000.0 987670.0 878700.0 822200.0 911050.0 857840.0 739070.0 760960.0 794970.0 931190.0 851290.0 True False 932881.9762286667 836485.9330444095 875200.327566514 997635.9180828286 925347.12755807 734457.1899859029 837885.2630539171 792212.4346173926 762109.3693896285 843748.2328935981 1.1056402133482262 0.9913928117819187 1.0372766347196394 1.182385786648085 1.0967100036282529 0.8704696037905924 0.9930512804517833 0.9389204074544064 0.9032426257960948 1.0 19.68645304997853 -6.2471032799376465 24.637372385257944 0.9405639646427458 1.0806262086861451 0.5978404223246344 0.0580323666332165 494.59919309655373 849995.8973177212 0.01999120977865825 0.01989991495264382 5.661046472048297e-07 6.2471032799376465 0.1400622440433993 GSESATYVPVAPPTPAWQPEIKPEPAWHDQDET(ph)SSVK ddPTM_KYSE-520_SHP099_60min_R1 2 GSESATYVPVAPPTPAWQPEIKPEPAWHDQDETSSVK 37 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YAN4 Q6PKG0 LARP1 La-related protein 1 1 GSESATYVPVAPPT(0.035)PAWQPEIKPEPAWHDQDET(0.322)S(0.322)S(0.322)VK;GSESATYVPVAPPTPAWQPEIKPEPAWHDQDET(0.333)S(0.333)S(0.333)VK 136.99 2.4780000000000002e-06 2419050000.0 1812790.0 1614480.0 1383400.0 1672390.0 1431540.0 1637930.0 1605392.0 1552000.0 1711430.0 1562570.0 True False 1712230.9249927267 1536917.9574161125 1472576.1775182597 1831333.4427776118 1544194.0536515887 1627707.0713107157 1767680.690476049 1546616.4742395242 1400677.453639419 1548726.845461066 1.1055732197132442 0.9923750995344579 0.9508301491860975 1.1824767215373035 0.997073214154735 1.0509968727417112 1.1413766705579373 0.9986373509132829 0.9044057431718556 1.0 20.562651282561266 -7.51913247838437 24.502021601294302 0.9519757209797259 1.0562811422441096 0.2826846602242271 0.06993061755912286 163.31205692107608 1068177.120812734 0.04458408735918146 0.017673371781711182 3.025990230910585e-08 7.51913247838437 0.10430542126438369 GSET(ph)PGAT(ph)PGSK ddPTM_KYSE-520_SHP099_60min_R1 2 GSETPGATPGSK 12 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 GSET(1)PGAT(1)PGSK;GSET(1)PGAT(1)PGSK 245.5 3.2705e-24 592880000.0 2417000.0 2315900.0 2218300.0 2435300.0 1973320.0 2061870.0 2071900.0 2350900.0 2496600.0 2519800.0 True False 2282924.1918299547 2204640.687763229 2361295.167405492 2666750.179800354 2128609.0573450644 2049001.1045181556 2281347.8717953805 2342745.2766041853 2043280.3741643985 2497476.5323747373 0.9140923497123817 0.8827473088073168 0.9454724145736991 1.0677778730776148 0.852303927485183 0.8204285717831563 0.9134611846086699 0.9380449610778024 0.8181379675353889 1.0 21.252039691071335 GSET(ph)PGATPGSK ddPTM_KYSE-520_SHP099_60min_R1 6 GSETPGATPGSK 12 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 GSET(1)PGATPGSK;GSET(1)PGATPGSK;GSET(1)PGATPGSK;GSET(1)PGATPGSK;GSET(1)PGATPGSK;GSET(0.999)PGAT(0.001)PGSK 289.31 5.9048e-29 9593200000.0 19833600.0 25824400.0 17950300.0 15764200.0 16613000.0 24804000.0 18467100.0 22583200.0 24978700.0 25552700.0 True False 18733390.670698605 24583757.060785346 19107405.059495464 17262424.828320462 17920348.584960114 24649189.035423394 20333934.689527724 22504864.1501585 20443197.741784938 25326322.957699794 0.7396806359133636 0.9706800747129898 0.7544484484150655 0.6816001224162026 0.7075779857538265 0.9732636307525828 0.8028774932503865 0.8885957976507796 0.8071917023220984 1.0 24.594134296502 -6.253709690902839 24.968112419853068 0.8817036986017985 0.7760383611045097 0.2986352365300273 0.09352495113743206 931.058045577687 3007465.616323364 0.03217264734810516 0.031617099716191366 5.575583306117954e-07 6.253709690902839 -0.10566533749728879 GSFLDKIS(ph)PSVLR ddPTM_KYSE-520_SHP099_60min_R1 5 GSFLDKISPSVLR 13 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 GS(0.001)FLDKIS(0.991)PS(0.008)VLR;GSFLDKIS(0.995)PS(0.005)VLR;GSFLDKIS(0.999)PS(0.001)VLR;GSFLDKIS(0.998)PS(0.002)VLR;GSFLDKIS(0.973)PS(0.027)VLR 222.75 2.5897e-11 22954227000.0 10181698.0 9753660.0 9235460.0 7316515.0 8454123.0 8868329.0 7818262.0 8623527.0 11230454.0 8872643.0 True False 9616898.91522824 9285079.533057855 9830792.528858459 8011874.385809547 9119414.38272009 8812978.469171377 8608608.221844057 8593613.997583322 9191286.65030683 8794038.285831802 1.093570280529954 1.0558379701413374 1.1178928507392316 0.911057482967477 1.0369996225070464 1.0021537526587858 0.9789141168186072 0.977209072585983 1.0451724624755205 1.0 23.068094382823045 -5.239981200612412 24.997615160790627 0.9937414972740372 1.0857741315670004 0.5809030959401338 0.0373426512361283 573.1638576243272 667703.9665379503 0.009666016168458198 0.016722567402231527 5.754648470539695e-06 5.239981200612412 0.09203263429296327 GSFS(ph)DTGLGDGK ddPTM_KYSE-520_SHP099_60min_R1 10 GSFSDTGLGDGK 12 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 GS(0.054)FS(0.929)DT(0.017)GLGDGK;GS(0.027)FS(0.956)DT(0.016)GLGDGK;GSFS(0.992)DT(0.008)GLGDGK;GS(0.004)FS(0.991)DT(0.005)GLGDGK;GSFS(0.999)DT(0.001)GLGDGK;GS(0.011)FS(0.972)DT(0.016)GLGDGK;GSFS(0.997)DT(0.003)GLGDGK;GSFS(1)DTGLGDGK;GSFS(1)DTGLGDGK;GSFS(0.998)DT(0.002)GLGDGK 303.7 1.6799e-30 74900300000.0 67869100.0 61488200.0 63082200.0 56941400.0 60095600.0 59123800.0 60329900.0 62477100.0 74845900.0 59726800.0 True False 64104265.729303345 58534214.57633018 67148579.54708867 62353093.535943806 64824781.82280918 58754786.43333991 66428635.05508374 62260381.52236471 61255771.271597885 59197667.018747255 1.0828850013464588 0.9887925914004859 1.1343112478710258 1.0533032241996507 1.0950563609589528 0.9925186142003352 1.1221495440698113 1.051737081169897 1.0347666446415675 1.0 25.819036984545395 -7.970525773241419 2.36839082850892 1.000843280479696 1.065214711059294 0.17283783185331614 0.04539560989438766 0.4816539947315822 6.163009188303818 0.04091414825262204 0.011243987548346887 1.0702228685634252e-08 7.970525773241419 0.06437143057959793 GSGEKPVSAPGDDTES(ph)LHS(ph)QGEEEFDMPQPPHGHVLHR ddPTM_KYSE-520_SHP099_60min_R1 6 GSGEKPVSAPGDDTESLHSQGEEEFDMPQPPHGHVLHR 38 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 GSGEKPVSAPGDDT(0.131)ES(0.869)LHS(1)QGEEEFDMPQPPHGHVLHR;GS(0.368)GEKPVS(0.411)APGDDT(0.371)ES(0.45)LHS(0.4)QGEEEFDMPQPPHGHVLHR;GSGEKPVSAPGDDT(0.007)ES(0.993)LHS(1)QGEEEFDMPQPPHGHVLHR;GSGEKPVSAPGDDT(0.107)ES(0.893)LHS(1)QGEEEFDMPQPPHGHVLHR;GSGEKPVSAPGDDT(0.095)ES(0.905)LHS(1)QGEEEFDMPQPPHGHVLHR;GSGEKPVSAPGDDT(0.132)ES(0.881)LHS(0.987)QGEEEFDMPQPPHGHVLHR 204.0 1.8645e-16 10495190000.0 2457290.0 2328780.0 2390960.0 2820850.0 2172360.0 1928850.0 2049610.0 2247230.0 2746220.0 1920050.0 True False 2320979.2252138285 2216901.9132299544 2545085.10727126 3088942.7358805225 2343312.3729623784 1916811.3316794198 2256804.5810659453 2239434.883637425 2247575.67457252 1903039.8507762973 1.2196167223019756 1.1649266894361803 1.337378776504894 1.6231624023114735 1.231352234692554 1.0072365699002597 1.185894546635657 1.1767672036525687 1.1810449863441788 1.0 20.85987434213704 -6.00007775491211 24.99999999999961 1.1252266759695777 1.337004609359105 0.4071040626412581 0.12819252506451626 3.2355929459290094 1040872.1848393396 0.04277209305769298 0.048012010403386624 9.9982097872469e-07 6.00007775491211 0.21177793338952733 GSGGFGS(ph)TGKN ddPTM_KYSE-520_SHP099_60min_R1 3 GSGGFGSTGKN 11 1 P33316-2;A0A0C4DGL3;H0YNW5;P33316 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 GSGGFGS(0.802)T(0.198)GKN;GSGGFGS(0.91)T(0.09)GKN;GSGGFGS(0.687)T(0.313)GKN 99.259 0.0018207 2694600000.0 6236390.0 5895490.0 5726810.0 5456690.0 5482970.0 5887300.0 5384280.0 5199820.0 6802550.0 5787900.0 True False 5890445.014764756 5612261.811089093 6095969.33581998 5975292.176986333 5914448.545168166 5850555.176916942 5928575.567908887 5181783.038067116 5567378.398330545 5736623.7089180555 1.0268139089561639 0.9783214127090762 1.062640613213534 1.0416043443283978 1.030998169877112 1.0198603697540367 1.0334607721772697 0.9032809716997137 0.9704974007055047 1.0 22.451770457528067 -7.238318100912884 24.8972328574332 0.9526668874597872 1.0274816856822107 0.5307965421629437 0.029927075870087735 504.5881859978102 543346.7934576998 0.013743771416475337 0.00792891283085938 5.7767277343393764e-08 7.238318100912884 0.07481479822242343 GSGGGGGPQVPHQS(ph)PPKR ddPTM_KYSE-520_SHP099_60min_R1 6 GSGGGGGPQVPHQSPPKR 18 1 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 GSGGGGGPQVPHQS(1)PPKR;GSGGGGGPQVPHQS(1)PPKR;GSGGGGGPQVPHQS(1)PPKR;GSGGGGGPQVPHQS(1)PPKR;GSGGGGGPQVPHQS(1)PPKR;GSGGGGGPQVPHQS(1)PPKR 137.72 5.3813e-06 7735380000.0 2672520.0 2793900.0 2413040.0 2485230.0 2063910.0 2622100.0 2229950.0 2431920.0 2976270.0 2559380.0 True False 2524269.9880634644 2659676.850270601 2568588.4194005094 2721425.511988354 2226327.9749584687 2605734.5012813876 2455375.1082147323 2423484.2371343956 2435854.393661088 2536705.8843675097 0.9950976199563845 1.0484766352539732 1.012568479156167 1.0728187011191095 0.8776452913513743 1.0272119118496423 0.9679384288679347 0.9553666635415464 0.9602431281734628 1.0 21.27452482669918 -5.730289898857198 24.99980364390468 0.9657865149175394 1.031994938113952 0.3979839313126672 0.04066142296296208 203.4713924788275 163300.21440087366 0.011347032559283217 0.01464744624410591 1.8608445770010292e-06 5.730289898857198 0.06620842319641251 GSGPQRPHS(ph)FSEALR ddPTM_KYSE-520_SHP099_60min_R1 2 GSGPQRPHSFSEALR 15 1 Q6DT37 Q6DT37 CDC42BPG Serine/threonine-protein kinase MRCK gamma 1 GSGPQRPHS(0.908)FS(0.092)EALR;GSGPQRPHS(0.998)FS(0.002)EALR 179.87 5.3191999999999996e-09 1280520000.0 479660.0 654400.0 575100.0 838210.0 494410.0 511040.0 478770.0 478290.0 612340.0 433720.0 True False 453052.30362149613 622961.641725574 612171.8661925349 917873.2263829742 533317.2541919065 507850.4097993376 527168.7439449172 476630.92362372554 501154.4918352269 429877.57822905376 1.053910058505294 1.4491605826290348 1.424060935474863 2.1351967929201914 1.2406258925831588 1.1813838067375015 1.2263229594729488 1.1087596742944337 1.1658074698843546 1.0 18.713566337906798 -5.978854423959693 24.99933159916048 1.1557727753333535 1.5272518326993372 0.33293736755498304 0.2534966374898613 292.5151498216106 345824.01374274964 0.0807828296889335 0.09159138844512059 1.0498942955249788e-06 5.978854423959693 0.37147905736598363 GSGS(ph)PTHSLSQK ddPTM_KYSE-520_SHP099_60min_R1 3 GSGSPTHSLSQK 12 0 I3L2R2;I3L419;I3L156;Q9BSJ6-2;Q9BSJ6 I3L2R2 FAM64A Protein FAM64A 1 GSGS(1)PTHSLSQK;GSGS(1)PTHSLSQK;GS(0.001)GS(0.999)PTHSLSQK 293.13 9.6325e-30 1110260000.0 1010040.0 1307960.0 1275260.0 2031260.0 932620.0 948160.0 1024340.0 904900.0 1288590.0 896600.0 True False 954011.0677351786 1245123.6383120143 1357465.300088145 2224310.3396794107 1006011.8881180724 942242.1817379054 1127890.283795008 901761.1131052469 1054614.5387104459 888656.8215442444 1.0735427271883946 1.40112989415681 1.5275472681672986 2.5030026054536587 1.1320589272807209 1.0602992728965317 1.2692079286974254 1.014746177875764 1.186751188020829 1.0 19.761266865997676 -5.941638076924579 24.999999988068115 1.1149438070606865 1.629963407440305 0.3492682796975799 0.34494154254176274 94.16221040979615 40334.73826407035 0.11122879645772783 0.12612158993305006 1.1438311593354397e-06 5.941638076924579 0.5150196003796186 GSGS(ph)QSSVPSVDQFTGVGIR ddPTM_KYSE-520_SHP099_60min_R1 3 GSGSQSSVPSVDQFTGVGIR 20 0 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 GSGS(0.648)QS(0.288)S(0.063)VPSVDQFTGVGIR;GS(0.001)GS(0.998)QS(0.001)SVPSVDQFTGVGIR;GS(0.02)GS(0.966)QS(0.013)SVPSVDQFTGVGIR 337.66 6.6711e-65 1463960000.0 1046340.0 1213530.0 877930.0 733290.0 746650.0 994550.0 861190.0 1069520.0 1145270.0 1057970.0 True False 988297.4343729231 1155230.1972543339 934522.772537667 802981.6611283215 805407.107142628 988342.6445404082 948247.4896044506 1065810.0847478437 937317.8379072577 1048597.2088882048 0.9424948168809112 1.1016910854447046 0.8912123402736429 0.7657674980650561 0.7680805368503473 0.942537931784424 0.9043009857043661 1.0164151455999861 0.8938778684153345 1.0 20.00002918019142 -9.225468545822709 13.408815342782285 1.000015161139296 0.9137982397287907 0.06765961321985703 0.09572215302766467 0.0 0.0 0.10226967916751159 0.024804040559157674 5.950198500583311e-10 9.225468545822709 -0.0862169214105053 GSGSQS(ph)SVPSVDQFTGVGIR ddPTM_KYSE-520_SHP099_60min_R1 2 GSGSQSSVPSVDQFTGVGIR 20 0 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 GSGS(0.163)QS(0.799)S(0.039)VPSVDQFTGVGIR;GS(0.001)GS(0.416)QS(0.547)S(0.036)VPSVDQFTGVGIR 360.69 5.702599999999999e-78 2044440000.0 1236640.0 1319680.0 948530.0 767800.0 848570.0 1261840.0 901160.0 1117670.0 1216410.0 1137270.0 True False 1168041.1140192777 1256280.5919199344 1009673.7615016592 840771.4811525117 915347.6312971544 1253964.3885042183 992258.047274059 1113793.0636361388 995540.6072007199 1127194.6725826727 1.0362372555780592 1.1145196322135686 0.8957403597270869 0.7458973162338526 0.8120581595722716 1.1124647933538276 0.8802898659914338 0.988110652691582 0.8832020159567452 1.0 20.10430526754575 -4.766628544512606 24.994661539523747 0.9104324952702272 1.0753784619723994 0.298834913663951 0.09826120156460946 143.11982460129408 689378.306669381 0.02687500796383733 0.05874348491624437 1.711478530304197e-05 4.766628544512606 0.1649459667021722 GSGTAEVELKK ddPTM_KYSE-520_SHP099_60min_R1 2 GSGTAEVELKK 11 1 P14618;P14618-3;H3BUW1;H3BTJ2;H3BT25;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 106.26 0.0018579 1215060000.0 1585370.0 1427270.0 1169190.0 1122980.0 1367940.0 1282040.0 1192090.0 1341030.0 1399560.0 1071910.0 False True 1497426.3657432573 1358701.8068240534 1244557.8581701445 1229707.6815637515 1475589.0954860866 1274038.312811408 1312598.0908772408 1336378.2799287564 1145435.1840364991 1062413.7113333617 1.4094569279080007 1.2788820327994836 1.1714437086925265 1.1574659367116327 1.3889025336788783 1.1991922724834292 1.235486775890618 1.2578699480935358 1.078144202976205 1.0 20.018914240422287 -13.99999999998135 0.10645020681559558 0.16973462644694703 1.3981490931728915 0.5280967570529207 0.08264399499522129 151.6989343078189 1.0808795477515267 27.18456336609797 1.1942552346769988 1.0000000000429432e-14 13.99999999998135 1.2284144667259445 GSGTAS(ph)DDEFENLR ddPTM_KYSE-520_SHP099_60min_R1 6 GSGTASDDEFENLR 14 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 GSGTAS(1)DDEFENLR;GSGTAS(1)DDEFENLR;GSGT(0.001)AS(0.999)DDEFENLR;GSGTAS(1)DDEFENLR;GSGTAS(1)DDEFENLR;GS(0.001)GT(0.01)AS(0.989)DDEFENLR 301.35 2.5715999999999997e-33 7075730000.0 6032550.0 5792490.0 5494300.0 4904170.0 5336160.0 5446860.0 5043860.0 5012850.0 6547620.0 5281320.0 True False 5697912.425909715 5514210.085695255 5848471.369190822 5370260.84230753 5756085.433402801 5412864.126329875 5553742.5921298545 4995461.593357986 5358737.260068206 5234531.613604785 1.0885238348929982 1.0534295124636506 1.117286473920681 1.0259295842917404 1.0996371515729266 1.034068475632394 1.0609817653398874 0.9543282880123515 1.023728129970713 1.0 22.31962901976368 -7.1557829676708735 6.326132695851769 0.9921090654645554 1.068667750826464 0.56080722799339 0.030805341320864488 0.163683405349931 8.335015785614125 0.013741561984015624 0.00786313232771259 6.985814227321528e-08 7.1557829676708735 0.07655868536190857 GSHQIS(ph)LDNPDYQQDFFPK ddPTM_KYSE-520_SHP099_60min_R1 11 GSHQISLDNPDYQQDFFPK 19 0 P00533;E9PFD7 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 GS(0.015)HQIS(0.985)LDNPDYQQDFFPK;GSHQIS(1)LDNPDYQQDFFPK;GS(0.048)HQIS(0.952)LDNPDYQQDFFPK;GS(0.014)HQIS(0.986)LDNPDYQQDFFPK;GS(0.023)HQIS(0.977)LDNPDYQQDFFPK;GS(0.008)HQIS(0.992)LDNPDYQQDFFPK;GS(0.005)HQIS(0.995)LDNPDYQQDFFPK;GS(0.002)HQIS(0.998)LDNPDYQQDFFPK;GS(0.018)HQIS(0.982)LDNPDYQQDFFPK;GS(0.004)HQIS(0.996)LDNPDYQQDFFPK;GS(0.005)HQIS(0.995)LDNPDYQQDFFPK 279.74 2.3884e-36 31200800000.0 6228428.0 8030793.0 6692478.0 8676810.0 9044915.0 7476240.0 8313408.0 9541540.0 11945600.0 9239726.0 True False 5882924.682776604 7644981.649813945 7123885.840223403 9501451.413621958 9756698.35197344 7429578.012989584 9153808.411683327 9508442.624752168 9776580.164070426 9157869.216038043 0.6423901176131587 0.8347991731990888 0.7778977480643036 1.0375177008405192 1.065389570631417 0.8112780208717408 0.9995565775991205 1.0382811110798755 1.067560579151845 1.0 23.126580531286866 -3.549256526625337 0.5663003128013573 1.0127942686720355 1.6572199951843565e-13 0.6609515622745279 0.08218687617891492 5.148223417817502 0.6942198801991079 0.04360925166659796 4.081122439041922 0.00028232118833761545 3.549256526625337 -1.0127942686718698 GSHQISLDNPDY(ph)QQDFFPK ddPTM_KYSE-520_SHP099_60min_R1 11 GSHQISLDNPDYQQDFFPK 19 0 P00533;E9PFD7 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 GSHQISLDNPDY(1)QQDFFPK;GSHQISLDNPDY(1)QQDFFPK;GSHQISLDNPDY(1)QQDFFPK;GSHQISLDNPDY(1)QQDFFPK;GSHQISLDNPDY(1)QQDFFPK;GSHQISLDNPDY(1)QQDFFPK;GSHQISLDNPDY(1)QQDFFPK;GSHQISLDNPDY(1)QQDFFPK;GSHQISLDNPDY(1)QQDFFPK;GSHQISLDNPDY(1)QQDFFPK;GSHQISLDNPDY(1)QQDFFPK 278.27 5.6347999999999994e-36 33529600000.0 7158590.0 8342180.0 6519291.0 10364633.0 8489143.0 6711898.0 5513497.0 8453728.0 8216050.0 6502522.0 True False 6761488.742404621 7941409.150932541 6939534.929094408 11349684.604079451 9157190.257483544 6670006.554929859 6070855.083305286 8424403.99068295 6724222.4297658475 6444914.71396556 1.0491199717124375 1.2321977098819026 1.07674581233124 1.7610294484558016 1.4208396330894375 1.0349254956743716 0.9419604995160417 1.307139716283291 1.0433376899767273 1.0 22.619729836746934 -6.271114421059889 24.106334086457956 1.0769493859926396 1.316098373466212 0.25594402791530346 0.2060503362470744 678.0019218260643 1689303.098480326 0.07690469323787424 0.06872166098279535 5.356555128553349e-07 6.271114421059889 0.23914898747357238 GSHS(ph)LDDLLDRPGNSIAPSEYWDGQSR ddPTM_KYSE-520_SHP099_60min_R1 2 GSHSLDDLLDRPGNSIAPSEYWDGQSR 27 1 Q6UXY1;B0QYF0 Q6UXY1 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 GS(0.039)HS(0.961)LDDLLDRPGNSIAPSEYWDGQSR;GS(0.096)HS(0.902)LDDLLDRPGNS(0.002)IAPSEYWDGQSR 118.86 0.00020925 1144360000.0 396890.0 377340.0 396350.0 410850.0 405570.0 383280.0 370170.0 338080.0 477450.0 423410.0 True False 374873.7205193999 359212.02000111295 421899.3551824217 449897.06047344336 437486.0516223609 380887.8073495027 407590.3961110554 336907.2793884655 390757.1155350442 419658.91680799506 0.8932819142048981 0.8559618433306443 1.0053387126656759 1.072054095491275 1.0424800572568846 0.9076128067207704 0.9712420725175218 0.8028121550497387 0.9311302581325249 1.0 18.67885770959662 -6.371952913025644 18.821488527045336 0.9132688670979352 0.9745888081003449 0.09393133853252311 0.07692419918596605 9.493504062609244 1596.0681493338075 0.02954790213400939 0.026058624647001236 4.246656044448367e-07 6.371952913025644 0.06131994100240967 GSIDEVDKR ddPTM_KYSE-520_SHP099_60min_R1 2 GSIDEVDKR 9 1 J3KNQ3;A0A087WUL9;Q9UNM6;Q9UNM6-2 J3KNQ3 PSMD13 26S proteasome non-ATPase regulatory subunit 13 0 ; 91.867 0.009412799999999999 1178090000.0 1200640.0 1199150.0 755940.0 619110.0 1081190.0 1196060.0 816010.0 948330.0 965430.0 876290.0 False True 1134038.1057834972 1141541.0340391544 804669.1019467647 677950.0282577913 1166273.5018704066 1188594.9458840697 898500.2542901445 945040.4645718848 790132.2485097878 868526.7523433033 1.3057031377834232 1.3143418218946659 0.9264758970011583 0.7805747219975298 1.3428181673434656 1.3685185202150834 1.0345107411671226 1.088095976344017 0.9097385271990697 1.0 19.728210761920092 -4.738051584207058 24.689470390527923 1.0702398586013755 1.3100228563087726 0.2525480430793745 0.1732541876272894 323.4627471857544 341459.195375513 0.04798535634676094 0.12678409957913386 1.827883092730354e-05 4.738051584207058 0.23978299770739708 GSIS(ph)EDELITAIK ddPTM_KYSE-520_SHP099_60min_R1 1 GSISEDELITAIK 13 0 Q2NKQ5;Q16799 Q2NKQ5 RTN1 Reticulon;Reticulon-1 1 GS(0.135)IS(0.865)EDELITAIK 97.69 0.0028539000000000004 62663000.0 149010.0 163680.0 121740.0 136510.0 124230.0 157480.0 124880.0 174010.0 211120.0 156040.0 True False 140744.1182559294 155816.56711131133 129587.55519088717 149483.86935677196 134006.19422798997 156497.1089057599 137504.08911135042 173406.3999242394 172785.92990210195 154657.60699728303 0.9100368290219436 1.007493715547071 0.8378996527029138 0.96654715056724 0.8664701131082685 1.0118940280028332 0.8890871375875229 1.121227744893827 1.117215850269411 1.0 17.23871827008419 -7.263235844689411 24.99984366701326 1.089416355957339 0.9291765576256292 0.5579741377994503 0.06195921920119781 107.51255044062383 1496129.3969612557 0.029660926683063436 0.015406352949706313 5.454615663979759e-08 7.263235844689411 -0.16023979833170987 GSKPS(ph)PLSVK ddPTM_KYSE-520_SHP099_60min_R1 1 GSKPSPLSVK 10 1 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 GS(0.003)KPS(0.992)PLS(0.005)VK 141.13 0.00036818 1706800000.0 2576000.0 2525700.0 2298200.0 1886800.0 1880500.0 2328600.0 2103600.0 2401400.0 2729600.0 2201300.0 True False 2433104.1448713094 2404361.5808470068 2446345.6492500147 2066120.9047128935 2028484.6514186182 2314066.3436496896 2316252.4171575657 2393070.103890973 2233973.4476164137 2181798.1945854826 1.11518294905069 1.102009153190178 1.1212520274886346 0.946980756442249 0.9297306489906633 1.0606234570147017 1.0616254165512442 1.0968338455086264 1.0239138767097768 1.0 21.057086235085144 -5.2299350473674115 24.682473368647518 1.0211640493670062 1.1117341835558632 0.44928184355467304 0.0484105931663259 643.5130538076755 504167.2895630993 0.014937812737678776 0.02586961765259452 5.889317287882978e-06 5.2299350473674115 0.09057013418885695 GSKPSPLS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 1 GSKPSPLSVK 10 1 Q96S94;Q96S94-3;A0A0A0MSF3 Q96S94 CCNL2 Cyclin-L2 1 GSKPS(0.25)PLS(0.75)VK 149.83 0.00024897 1469500000.0 2870700.0 2661700.0 2177100.0 1840100.0 2061200.0 2527000.0 2084400.0 2462600.0 2735200.0 2343600.0 True False 2711456.5484014247 2533827.936706847 2317439.349483165 2014982.5507537634 2223404.71337626 2511228.055656943 2295111.4937836234 2454057.815375161 2238556.628780928 2322837.527293209 1.167303574417911 1.0908330466227245 0.9976760415885245 0.8674659880761495 0.9571933840621141 1.0811036183762988 0.9880637224154483 1.0564913759744798 0.9637164039576659 1.0 21.147456816554936 -4.592152927024359 2.890505729371006 0.9885163414239179 1.1593172058426282 0.5343778993401376 0.05458384974168289 0.22344826456533434 3.5423326614808874 0.015665491938894095 0.06228246608280789 2.5576850970937603e-05 4.592152927024359 0.17080086441871034 GSKS(ph)PDLLMYQGPPDTAEIIK ddPTM_KYSE-520_SHP099_60min_R1 1 GSKSPDLLMYQGPPDTAEIIK 21 1 P82909 P82909 MRPS36 28S ribosomal protein S36, mitochondrial 1 GS(0.2)KS(0.8)PDLLMYQGPPDTAEIIK 266.99 8.6492e-36 976640000.0 528270.0 631790.0 483870.0 455180.0 492310.0 587300.0 492190.0 482720.0 717620.0 547310.0 True False 498965.81001986365 601437.8600638765 515061.0344193735 498440.17034514324 531051.9961392711 583634.4428521268 541945.3685114953 481045.5569876955 587318.2977280518 542461.2592007368 0.9198183309072442 1.1087203922175677 0.9494890661468898 0.9188493406506959 0.978967598389835 1.0759006895940453 0.9990489815069898 0.8867832473354296 1.082691690450683 1.0 19.04916058313732 -6.055076900453612 24.992553538685947 1.0041096674311785 0.9779156115932626 0.051155020670196616 0.0706534864613512 1424.1501999197674 646239.7409602196 0.02360257416469518 0.023602716421897617 8.80892879637953e-07 6.055076900453612 -0.026194055837915897 GSLAEAVGS(ph)PPPAATPTPTPPTR ddPTM_KYSE-520_SHP099_60min_R1 3 GSLAEAVGSPPPAATPTPTPPTR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 GSLAEAVGS(1)PPPAATPTPTPPTR;GSLAEAVGS(1)PPPAATPTPTPPTR;GSLAEAVGS(1)PPPAATPTPTPPTR 322.45 1.9205000000000002e-52 1244740000.0 1243630.0 1859470.0 1383680.0 1212050.0 1234310.0 2566230.0 1872760.0 2832180.0 2930530.0 2764260.0 True False 1174643.364785059 1770138.2700786283 1472874.2267662778 1327242.8675838811 1331443.17473678 2550213.2066753153 2062076.85717627 2822355.828615784 2398419.6246495205 2739770.80696174 0.428737820623644 0.6460899085356769 0.5375903061028733 0.4844357287884686 0.48596881584167245 0.9308126067316433 0.7526457512199729 1.0301430402295682 0.8754088548411245 1.0 21.385623780214477 -6.262854824438093 24.99993665622081 0.9093637358429434 0.5231435290735971 0.8408088871264886 0.08723148106051425 49.98052733837369 882762.5842644688 0.029388810703620656 0.027332002856383316 5.459403270251259e-07 6.262854824438093 -0.3862202067693463 GSLAS(ph)LDS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 5 GSLASLDSLR 10 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 2 GSLAS(1)LDS(1)LR;GSLAS(1)LDS(1)LR;GS(0.18)LAS(0.82)LDS(1)LR;GSLAS(1)LDS(1)LR;GS(0.02)LAS(0.98)LDS(1)LR 142.1 0.00023889 1360380000.0 3473370.0 3113030.0 3782760.0 4016730.0 3817610.0 3324060.0 3415600.0 4154740.0 4929850.0 4083660.0 True False 3280695.2421085667 2963475.366046709 4026602.7622299953 4398478.811526091 4118034.1877704007 3303313.30854255 3760882.1810436323 4140328.176663606 4034713.51140525 4047481.9494394083 0.8105521613414374 0.7321775373098728 0.9948414378445085 1.0867198091236199 1.0174311434151706 0.8161403435042055 0.9291905999888471 1.0229392566499418 0.996845337868418 1.0 21.948593215877384 -4.765643701703169 24.998756045092176 0.9808837664861884 0.7713648185813629 0.5987599439135995 0.06928531843561521 70.30864995432334 418063.0966634736 0.019920630115314794 0.0439686666172694 1.7153640272956405e-05 4.765643701703169 -0.2095189479048255 GSLAS(ph)LDS(ph)LRK ddPTM_KYSE-520_SHP099_60min_R1 13 GSLASLDSLRK 11 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 2 GSLAS(1)LDS(1)LRK;GS(0.001)LAS(0.999)LDS(1)LRK;GS(0.004)LAS(0.996)LDS(1)LRK;GSLAS(1)LDS(1)LRK;GS(0.002)LAS(0.998)LDS(1)LRK;GS(0.001)LAS(0.999)LDS(1)LRK;GS(0.004)LAS(0.996)LDS(1)LRK;GSLAS(1)LDS(1)LRK;GS(0.016)LAS(0.984)LDS(1)LRK;GS(0.066)LAS(0.934)LDS(1)LRK;GS(0.086)LAS(0.914)LDS(1)LRK;GS(0.001)LAS(0.999)LDS(1)LRK;GS(0.115)LAS(0.885)LDS(1)LRK 141.54 0.00010112 34197320000.0 47264870.0 44490870.0 48258740.0 54375740.0 50435020.0 43478480.0 48481160.0 57431800.0 64234200.0 54311980.0 True False 44642993.440917574 42353461.823042594 51369575.59711401 59543593.9809376 54403969.13799047 43207114.67879672 53382108.78332517 57232582.490482956 52570888.49241005 53830818.111281015 0.8293203597357551 0.786788373446006 0.954278188581882 1.106124633993987 1.010647265763723 0.8026464429627915 0.9916644527484562 1.063193622139825 0.9765946410796433 1.0 25.681929015560318 -4.836979096412831 5.0045611668088394 0.9909743656093021 0.8081504718588546 0.4855430509235167 0.07477955321826141 0.16974425346684197 7.593109483251835 0.02118823491461055 0.04713008537386222 1.4555291368438746e-05 4.836979096412831 -0.1828238937504475 GSLAS(ph)LDSLR ddPTM_KYSE-520_SHP099_60min_R1 3 GSLASLDSLR 10 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 1 GSLAS(1)LDSLR;GSLAS(1)LDSLR;GSLAS(1)LDSLR 208.15 6.1706e-09 51042800000.0 7606200.0 8169400.0 6689300.0 5380000.0 6320300.0 7186900.0 6088200.0 6793600.0 9253900.0 6723700.0 True False 7184268.923416216 7776929.761480597 7120502.981258424 5891313.58244402 6817671.652412184 7142043.8912548 6703654.671106055 6770034.587238164 7573625.03183527 6664133.248959443 1.0780500111605644 1.1669829325058754 1.0684814836753511 0.8840329810878116 1.0230395158255148 1.0717138485143556 1.0059304669744986 1.0158912396139823 1.1364756298979823 1.0 22.667985816920055 -4.999042850239069 24.996967776682272 1.0184746386963621 1.1213204414081683 0.30284818176514594 0.06270309441119674 38.966642459587526 1017524.1275716415 0.01662045287826241 0.03417124893592298 1.002206349185409e-05 4.999042850239069 0.10284580271180621 GSLASLDS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 2 GSLASLDSLR 10 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 1 GSLASLDS(1)LR;GSLASLDS(1)LR 176.18 2.6683000000000002e-05 543650000.0 497880.0 563720.0 546170.0 672140.0 571790.0 468370.0 464500.0 681210.0 721340.0 688260.0 True False 470261.60390082625 536638.0450390296 581376.9921028977 736019.9835137398 616786.6199599319 465446.7290969697 511456.19308313774 678847.0415056094 590362.8395016205 682162.5518581776 0.689368835360218 0.7866718036298732 0.8522558010832683 1.0789510234897197 0.9041637045009803 0.6823105839350393 0.7497570655116672 0.9951397063008854 0.8654283907750445 1.0 19.379756033065366 -11.076864500643826 0.02277538373693351 1.958804297338907 2.702452133380208e-06 0.17955870882923575 0.11672280603740486 3064.397269354231 9.48770194376932 491.7876815167426 335.67097583709614 8.377906310240432e-12 11.076864500643826 -1.9588015948867736 GSLASLDS(ph)LRK ddPTM_KYSE-520_SHP099_60min_R1 7 GSLASLDSLRK 11 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;E9PKY0 O60716-5 CTNND1 Catenin delta-1 1 GSLAS(0.331)LDS(0.669)LRK;GSLAS(0.023)LDS(0.977)LRK;GSLASLDS(1)LRK;GSLASLDS(1)LRK;GSLASLDS(1)LRK;GSLAS(0.106)LDS(0.894)LRK;GSLASLDS(1)LRK 130.61 9.5696e-05 6967760000.0 5077380.0 4856030.0 5231660.0 5691170.0 5393670.0 4703680.0 5353550.0 5843080.0 6312360.0 5754750.0 True False 4795727.609893907 4622739.029750363 5568901.174551957 6232057.085687345 5818121.143215664 4674322.58837849 5894739.079612986 5822811.719265126 5166194.545646232 5703767.392127748 0.8407999976494303 0.8104711696571982 0.9763548882161761 1.0926211847784562 1.0200488104135779 0.8195149393416566 1.0334816752430709 1.0208711749538877 0.9057512676229634 1.0 22.44348371711817 -4.774322398579738 10.54977876438132 0.9855014628502933 0.825572274958491 0.4394084449153679 0.07133432020579178 0.23009197439498286 182.13317040196642 0.019265225357884014 0.04216365037426526 1.6814253912382373e-05 4.774322398579738 -0.15992918789180233 GSLDQDRR ddPTM_KYSE-520_SHP099_60min_R1 2 GSLDQDRR 8 1 A0A2R8Y5T7;A0A2R8Y430;P48637-2;P48637;A0A2R8Y7I7;A0A2R8Y6Q7 A0A2R8Y5T7 GSS Glutathione synthetase 0 ; 83.265 0.017815 991740000.0 715050.0 686640.0 484060.0 465620.0 598640.0 638600.0 473790.0 560470.0 573970.0 558580.0 False True 675384.7510831639 653652.7837323479 515263.28212338383 509872.3848062428 645749.5622043299 634614.2605233571 521685.3169448015 558525.8603846809 469751.5166062403 553631.4157686642 1.2199176778027614 1.1806641839947134 0.9306973330044686 0.9209599930277327 1.16638894364 1.1462757395048762 0.9422971711612343 1.0088406193662642 0.8484914389369239 1.0 19.07856628534443 -4.675439293419962 6.3610574214006705 1.0030181923723835 1.2076151987899821 0.43424901320032727 0.09340461135495685 0.2083409047830773 12.32450341586425 0.025557603227038903 0.06888418313017851 2.1113523043702912e-05 4.675439293419962 0.2045970064175986 GSLGS(ph)QGAKDEPEEELQK ddPTM_KYSE-520_SHP099_60min_R1 7 GSLGSQGAKDEPEEELQK 18 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GS(0.025)LGS(0.975)QGAKDEPEEELQK;GSLGS(1)QGAKDEPEEELQK;GSLGS(1)QGAKDEPEEELQK;GS(0.002)LGS(0.998)QGAKDEPEEELQK;GS(0.003)LGS(0.997)QGAKDEPEEELQK;GS(0.007)LGS(0.993)QGAKDEPEEELQK;GS(0.378)LGS(0.622)QGAKDEPEEELQK 228.18 4.962399999999999e-19 5234480000.0 5594670.0 5384790.0 4866590.0 4890290.0 5135680.0 5103720.0 4914310.0 5758010.0 6942070.0 5025860.0 True False 5284322.50240186 5126096.605665423 5180298.178219306 5355061.6912807 5539828.797977967 5071865.790351195 5411096.413843703 5738036.807239638 5681565.083343526 4981334.790459918 1.060824603181102 1.0290608484060835 1.0399417818975822 1.0750254533255887 1.1121173402333162 1.0181740444478173 1.0862743905924273 1.1519074803462175 1.1405708153213603 1.0 22.248100945663907 -5.755825796005097 0.769062444067349 1.0983683985861765 1.039430950433953 0.09766517789816243 0.04651992309072398 1.3811269906428831 1.765533288983803 0.02728155292832793 0.0477465093224501 1.7545841586657698e-06 5.755825796005097 -0.05893744815222357 GSLLLDGAGAGGAGGS(ph)RPCSNR ddPTM_KYSE-520_SHP099_60min_R1 4 GSLLLDGAGAGGAGGSRPCSNR 22 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 GSLLLDGAGAGGAGGS(0.902)RPCS(0.098)NR;GSLLLDGAGAGGAGGS(0.988)RPCS(0.012)NR;GSLLLDGAGAGGAGGS(0.992)RPCS(0.008)NR;GSLLLDGAGAGGAGGS(0.989)RPCS(0.011)NR 196.37 5.2864e-14 5092920000.0 1999620.0 2032870.0 1880460.0 1782940.0 1826540.0 2184260.0 1986870.0 2081410.0 2303670.0 2018030.0 True False 1888697.0924563566 1935207.8737999233 2001677.4604423796 1952390.0815395445 1970278.30640902 2170627.223129893 2187722.209582553 2074190.0745147453 1885381.598794879 2000151.8242035843 0.9442768641867442 0.9675304896269461 1.0007627602166664 0.9761209413775089 0.9850643748974109 1.0852312293813937 1.0937780737988 1.0370163151692953 0.9426192431894992 1.0 20.931678083180312 -6.086312658720502 8.141731014029496 1.0378684443383872 0.9746934150919748 0.3141847759349765 0.041876091100136376 0.3945237765446934 33.83707821761595 0.014644568037146055 0.01467095697054452 8.197611666702812e-07 6.086312658720502 -0.06317502924641238 GSLLPTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 GSLLPTSPR 9 0 Q9H0E9-2;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;H7C128 Q9H0E9-2 BRD8 Bromodomain-containing protein 8 1 GSLLPTS(1)PR;GSLLPT(0.001)S(0.999)PR;GSLLPT(0.001)S(0.999)PR;GSLLPTS(1)PR 137.01 0.00046425 4529110000.0 5604500.0 5585400.0 5480900.0 4290090.0 4615360.0 5316900.0 4967900.0 5421700.0 6617900.0 5427900.0 True False 5293607.21270624 5317069.000143673 5834207.583750069 4697818.863737408 4978562.574193802 5283715.254896084 5470103.814031696 5402893.388134298 5416256.183682839 5379813.028842297 0.9839760572209685 0.9883371358145273 1.0844628897829103 0.8732308796888337 0.9254155390722115 0.982137339451945 1.0167832570956148 1.004290178704773 1.0067740560211225 1.0 22.359124603249327 -6.611615036521197 5.753409834179577 1.0069511989960456 0.9711382761394597 0.10246149950290628 0.050143033085696335 0.5617318424367065 28.93670033195664 0.020803659447932995 0.016002196074363116 2.445597397038863e-07 6.611615036521197 -0.03581292285658588 GSLLTILGS(ph)PSPER ddPTM_KYSE-520_SHP099_60min_R1 4 GSLLTILGSPSPER 14 0 Q96A19 Q96A19 CCDC102A Coiled-coil domain-containing protein 102A 1 GSLLTILGS(0.999)PS(0.001)PER;GSLLT(0.012)ILGS(0.976)PS(0.012)PER;GSLLT(0.09)ILGS(0.874)PS(0.036)PER;GSLLT(0.009)ILGS(0.969)PS(0.022)PER 136.39 7.1748e-06 339103000.0 716870.0 667960.0 583430.0 527067.0 540473.0 663420.0 565202.0 647750.0 856220.0 680700.0 True False 677103.7920550838 635870.1989715986 621038.8313210055 577159.2892115276 583005.1502292879 659279.3496968454 622338.1339999482 645503.1064359862 700752.0315497231 674669.527576587 1.0036080842234576 0.942491357591982 0.9205081983645785 0.8554696271590682 0.8641344041777645 0.9771885682535223 0.9224340340898258 0.9567693219443798 1.0386596739693053 1.0 19.363821476340483 -7.5841593965581415 3.7123509179158956 1.0185611654045412 0.9242593830846461 0.4163880560642417 0.04320122099760465 0.23758118498669076 6.504767361577497 0.035723409450967344 0.012208282837032037 2.6051972042487373e-08 7.5841593965581415 -0.09430178231989517 GSLLTILGSPS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 3 GSLLTILGSPSPER 14 0 Q96A19 Q96A19 CCDC102A Coiled-coil domain-containing protein 102A 1 GSLLT(0.007)ILGS(0.086)PS(0.907)PER;GSLLTILGSPS(1)PER;GSLLTILGSPS(1)PER 244.86 1.4483e-18 990203000.0 755867.0 844273.0 622676.0 491987.0 632166.0 779476.0 540983.0 661069.0 773315.0 688779.0 True False 713937.5507264921 803712.8578003901 662814.6912768257 538745.2965587141 681913.8676674834 774611.0011520593 595670.8411252854 658775.905933664 632900.4896847474 682676.9539219538 1.04579119981266 1.177296015608978 0.9709053271374988 0.789165788391775 0.9988822147135823 1.1346669851705815 0.8725515600067916 0.9649892268210034 0.9270863562168864 1.0 19.380843524068418 -4.839552566911811 7.418601056546253 0.9540688043225978 1.1107548535389875 0.3221782905677876 0.08956263994934976 0.24422091496746745 19.460224264350007 0.024156022005991436 0.05098781576615037 1.44692970643106e-05 4.839552566911811 0.15668604921638973 GSLPQLVS(ph)PIVSR ddPTM_KYSE-520_SHP099_60min_R1 2 GSLPQLVSPIVSR 13 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 GSLPQLVS(0.999)PIVS(0.001)R;GSLPQLVS(1)PIVSR 167.65 7.7302e-07 808040000.0 1020910.0 1134470.0 956600.0 913530.0 968500.0 1125190.0 935220.0 1180750.0 1392200.0 1173150.0 True False 964278.087166371 1079968.3583258134 1018263.9666141174 1000351.6165371909 1044715.4399887978 1118167.2718419612 1029761.1644676275 1176654.2538391207 1139411.5745059988 1162756.8036968894 0.8293033281770774 0.9287998615808079 0.8757325378588463 0.8603274677530636 0.8984814680655586 0.9616518848024286 0.8856204162328587 1.0119521555135567 0.9799225176609017 1.0 20.149117950924857 -6.918699985118404 0.7597477843070266 1.0063556117372972 0.8755031624664311 0.6456754812591388 0.035490409375354526 0.42231713781104135 0.465999405194073 0.029998667384303894 0.016701270000723897 1.2058686786003216e-07 6.918699985118404 -0.13085244927086603 GSLS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 3 GSLSPAR 7 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 GSLS(1)PAR;GS(0.355)LS(0.645)PAR;GS(0.001)LS(0.999)PAR 133.05 0.0019147000000000003 3644160000.0 4573800.0 4127100.0 4109000.0 3480340.0 3668010.0 3852000.0 3558310.0 3927300.0 4545200.0 4005300.0 True False 4320082.196355747 3928827.921096603 4373872.714632457 3811110.467197625 3956661.518877965 3827958.239173153 3918018.7005590103 3913677.1129387114 3719906.2551678373 3969816.158076244 1.0882323070721847 0.9896750289314395 1.1017821834732058 0.9600219041489501 0.9966863354184508 0.9642658719561878 0.9869521772659784 0.9858585277246851 0.9370474870983668 1.0 21.92064076712743 -5.277321482591447 24.994540256473574 0.9760941568341455 1.0528743611776161 0.5770554392999425 0.03281455842004932 556.476094941929 875755.2544651672 0.008581112315214722 0.012768555726504918 5.280542196684118e-06 5.277321482591447 0.07678020434347066 GSLS(ph)PVTKPR ddPTM_KYSE-520_SHP099_60min_R1 2 GSLSPVTKPR 10 1 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;H0YFK8;F5H4P8;F5H4Q7 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 GS(0.009)LS(0.991)PVTKPR;GS(0.001)LS(0.999)PVTKPR 154.85 7.5523e-05 3340400000.0 5691100.0 5131200.0 4667500.0 4263200.0 4760000.0 4810400.0 4476000.0 4562400.0 5899400.0 4708700.0 True False 5375403.338073419 4884689.449911776 4968374.518264052 4668373.24622218 5134584.9193047695 4780376.50927272 4928477.761550324 4546574.099272161 4828217.671771784 4666984.581313162 1.1517936784271372 1.0466478654054945 1.0645791584908317 1.0002975507814142 1.1001932468052074 1.0242966150806636 1.0560304358587755 0.9741995114954674 1.034547594415505 1.0 22.15405927028816 -1.0000000018082187 0.8969181161003027 1.0290220970435184 59.363595592615404 0.5300897842169308 0.03395277020978691 738.6619392490752 1.635112415156039 0.01118353623209279 88185.81474457792 0.09999999958364227 1.0000000018082187 58.33457349557189 GSLT(ph)FEPLTLVPIQTK ddPTM_KYSE-520_SHP099_60min_R1 1 GSLTFEPLTLVPIQTK 16 0 Q5T6H7;Q9NQW7-2;Q9NQW7;Q9NQW7-4;Q9NQW7-3 Q5T6H7 XPNPEP1 Xaa-Pro aminopeptidase 1 1 GS(0.499)LT(0.501)FEPLTLVPIQTK 116.87 0.0010026 6949700.0 46385.0 46789.0 49104.0 41366.0 45351.0 55663.0 43707.0 43204.0 56393.0 49317.0 True False 43811.93158379497 44541.18620827921 52269.32240917791 45297.41220285859 48919.865688107326 55315.586569858504 48125.330099213614 43054.13540788943 46153.45275184364 48880.0897480454 0.8963144668846871 0.9112337239532238 1.0693376930894043 0.9267047674492032 1.0008137452338355 1.1316588585451697 0.98455895533903 0.8808113002618017 0.9442178398146088 1.0 15.5769593136206 -1.0520517847060455 21.224539699858862 0.9761686970995722 0.004882911162117698 0.0 0.07566847264153934 0.0 0.0 0.018268067097586473 0.0 0.08870502350218028 1.0520517847060455 -0.9712857859374545 GSMNNELLS(ph)PEFGPVRDPLADGVEGLGR ddPTM_KYSE-520_SHP099_60min_R1 2 GSMNNELLSPEFGPVRDPLADGVEGLGR 28 1 O00562-2;O00562 O00562-2 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 1 GS(0.041)MNNELLS(0.959)PEFGPVRDPLADGVEGLGR;GS(0.113)MNNELLS(0.887)PEFGPVRDPLADGVEGLGR 80.23899999999999 0.0080173 161967000.0 48236.0 48523.0 39720.0 40560.0 52687.0 65351.0 50089.0 62314.0 62778.0 55194.0 True False 45560.25292391794 46191.88224549211 42280.41475424705 44414.810205191345 56833.167151977 64943.120168277404 55152.48494153132 62097.8472781969 51379.09770459526 54705.02410028225 0.8328348935629639 0.84438098703358 0.7728799219015225 0.8118963648342893 1.0389021499706053 1.1871509287561457 1.0081795200460713 1.1351397481219008 0.9392025421725418 1.0 15.739385715523646 -5.7824881161712565 5.638846234812202 1.0644341984913062 0.8135377090315286 0.7418665336288992 0.06802265638180793 0.08000970396443614 7.588006127368183 0.020220112127309096 0.023951370301435217 1.6501061534266023e-06 5.7824881161712565 -0.2508964894597776 GSNNLKT(ph)PEGK ddPTM_KYSE-520_SHP099_60min_R1 5 GSNNLKTPEGK 11 1 Q14241;A0A024RAC6 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 1 GS(0.006)NNLKT(0.994)PEGK;GSNNLKT(1)PEGK;GSNNLKT(1)PEGK;GS(0.001)NNLKT(0.999)PEGK;GSNNLKT(1)PEGK 107.82 0.0014824999999999999 1775150000.0 4674490.0 4541810.0 3575720.0 3009500.0 2868140.0 3757200.0 3395220.0 3609480.0 3901780.0 4549750.0 True False 4415186.721335209 4323614.630204208 3806216.6325542857 3295521.9751608307 3093846.3005157113 3733749.9211374223 3738441.971753997 3596959.556338961 3193315.1078695655 4509442.754651934 0.9790980752068555 0.9587913330852186 0.8440547623379405 0.7308047034772036 0.6860817331197085 0.827984769800147 0.8290252643516599 0.7976505639479164 0.7081396264705537 1.0 22.10451773567168 -4.84259888558042 3.2025324340139476 0.7865936841468915 0.9746685877017158 0.39575383480044013 0.08299233387620408 0.21612906995121842 4.373693020129144 0.021640738387139175 0.05541538868151094 1.436815863965024e-05 4.84259888558042 0.18807490355482437 GSPAT(ph)SPHLGR ddPTM_KYSE-520_SHP099_60min_R1 1 GSPATSPHLGR 11 0 Q13671;Q13671-2;E9PNR2 Q13671 RIN1 Ras and Rab interactor 1 1 GSPAT(0.5)S(0.5)PHLGR 99.589 0.0079275 638830000.0 494240.0 586390.0 548000.0 654540.0 501630.0 545010.0 475700.0 581720.0 654630.0 522830.0 True False 466823.5219569866 558218.9442106654 583324.9568310014 716747.2848053728 541105.427115725 541608.3904288061 523788.3983846045 579702.1490944689 535765.6938793719 518198.13295558514 0.9008591352778921 1.0772307129452943 1.125679387349314 1.3831529664480775 1.0442056671055264 1.04517626750158 1.0107878918766744 1.1186882241124463 1.0339012431858616 1.0 18.98314429199926 GSPATS(ph)PHLGR ddPTM_KYSE-520_SHP099_60min_R1 2 GSPATSPHLGR 11 0 Q13671;Q13671-2;E9PNR2 Q13671 RIN1 Ras and Rab interactor 1 1 GSPAT(0.037)S(0.963)PHLGR;GSPAT(0.034)S(0.966)PHLGR 144.92 7.7038e-05 2182600000.0 1825430.0 2210730.0 2139300.0 2448400.0 1813590.0 1996200.0 1977690.0 2091150.0 2378900.0 2008930.0 True False 1724169.758995511 2104523.2124266187 2277202.7010010225 2681095.199861697 1956309.2150844443 1983740.9753472095 2177614.205594387 2083896.2887280772 1946951.7271888526 1991132.4431238913 0.8659241955248632 1.0569478789290523 1.1436721393722635 1.3465177613475685 0.9825108429327721 0.9962878070706912 1.0936561317728941 1.04658848582601 0.9778112620847443 1.0 20.92515775657198 GSPDGS(ph)LQTGKPSAPK ddPTM_KYSE-520_SHP099_60min_R1 3 GSPDGSLQTGKPSAPK 16 1 E7EV54;C9JFV4;Q8IZL8 E7EV54 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 1 GS(0.344)PDGS(0.655)LQT(0.001)GKPSAPK;GS(0.393)PDGS(0.606)LQT(0.001)GKPSAPK;GS(0.3)PDGS(0.694)LQT(0.006)GKPSAPK 192.41 5.0989e-12 20952760000.0 8983570.0 7883730.0 7190840.0 7237080.0 8117400.0 8531660.0 7862180.0 7662940.0 8555060.0 6984240.0 True False 8485233.463797184 7504983.777080019 7654373.052150791 7924889.907292562 8756193.19831189 8478410.74528141 8656965.881882438 7636359.0496836435 7001676.759512487 6922365.067256501 1.225770871856096 1.0841646899813713 1.1057453598274907 1.1448240348920784 1.2649135249641172 1.2247852667269983 1.2505792164632834 1.1031430696720124 1.011457311408082 1.0 22.72283359676114 -7.5961363557782295 3.3933437862014095 1.0054573983735777 1.1818772068309782 0.6126740216225843 0.05709021240149633 0.18706565733105265 4.167965829999627 0.05102441070335299 0.01691527218269197 2.53433279911901e-08 7.5961363557782295 0.17641980845740046 GSPHSEGGKRS(ph)PEPNK ddPTM_KYSE-520_SHP099_60min_R1 1 GSPHSEGGKRSPEPNK 16 2 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9J7T7;A0A384DVL6;Q9Y618-2 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 GSPHSEGGKRS(1)PEPNK 92.098 0.0011712 266500000.0 87392.0 130930.0 132140.0 324260.0 103620.0 87864.0 99441.0 88488.0 152150.0 76472.0 True False 82544.19154836718 124639.92627006328 140657.9558314752 355077.572907676 111774.30448284898 87315.60818450396 109493.46673063585 88181.05578125446 124523.39538937483 75794.51757431569 1.0890522717218103 1.644445142722298 1.8557800792591843 4.684739533562257 1.474701707458663 1.1520042739092833 1.4446093231384276 1.1634226142384758 1.6429076848108575 1.0 16.20980587762396 -5.971913801903516 24.99944532183777 1.3024182484420612 2.3426069392546243 0.23356523607684754 0.8972718086243842 336.86058619225093 299837.15447857295 0.2923451854223246 0.3314824736294987 1.0668078385872898e-06 5.971913801903516 1.040188690812563 GSPHYFSPFRPY(ph) ddPTM_KYSE-520_SHP099_60min_R1 1 GSPHYFSPFRPY 12 1 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 GS(0.025)PHY(0.016)FS(0.003)PFRPY(0.955) 76.064 0.023716 4076400000.0 781220.0 874030.0 861630.0 1141500.0 713690.0 741640.0 723390.0 742020.0 973110.0 631440.0 True False 737884.1692765403 832040.2868542226 917172.0484567445 1249987.816795512 769853.3426593742 737011.1496626096 796517.3208060534 739446.1058087702 796417.7541068321 625845.9328528856 1.1790188775581465 1.3294650379230093 1.4654917453499525 1.997277207023634 1.2301004164875506 1.177623934221292 1.2727051163777183 1.1815145980705575 1.2725460249879772 1.0 19.25544802094667 -5.962940509611323 24.999243825713734 1.1986163718850802 1.4960058659951356 0.33948945834899025 0.20773950496711022 213.58686532153442 144078.53564542416 0.06733712801057233 0.07635295047300462 1.089079267026155e-06 5.962940509611323 0.29738949411005544 GSPRPQAPK ddPTM_KYSE-520_SHP099_60min_R1 1 GSPRPQAPK 9 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 0 71.45100000000001 0.023725 318410000.0 377010.0 334130.0 274150.0 228410.0 305390.0 316080.0 294980.0 292380.0 381460.0 310270.0 False True 356096.5037491976 318077.8932606448 291822.1476555091 250118.01772602962 329422.4555685894 314107.227476077 324799.45712737204 291365.80202200497 312196.4798240615 307521.2491864076 1.157957392184452 1.0343281776533049 0.9489495390239447 0.8133357235890313 1.0712185139730168 1.0214163356421502 1.056185411533923 0.9474655907286269 1.015202951503426 1.0 18.230326576064908 -4.340260903205576 3.1111591219836914 0.9835648567122279 1.1704119852488728 0.36652504304978595 0.06884555680888958 0.3369254245042763 5.1943417647806625 0.018579864328137713 0.13731677848589766 4.5681367551331695e-05 4.340260903205576 0.18684712853664487 GSPSQEWVIHAS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 1 GSPSQEWVIHASPVK 15 0 Q5T7B8-4;Q5T7B8-2;Q5T7B8 Q5T7B8-4 KIF24 Kinesin-like protein KIF24 1 GSPSQEWVIHAS(1)PVK 145.88 5.3947e-06 316160000.0 159780.0 156580.0 145920.0 137140.0 127950.0 161380.0 155450.0 161260.0 181320.0 168170.0 True False 150916.68488646674 149057.6617686283 155326.23668025504 150173.74436735566 138018.93706408536 160372.7675591285 171164.40304579964 160700.6266983671 148396.8587052346 166680.1446342801 0.9054268894330478 0.894273652663801 0.9318820608241183 0.9009696067690497 0.8280466600681113 0.962158797684086 1.0269033748522276 0.964125793452886 0.8903091548836748 1.0 17.34672273146817 -6.485251311487733 23.11517198910666 0.9712287706536151 0.8949563179682867 0.4704749734853274 0.04063564080838479 217.10284489967952 133369.9648782267 0.014754236641427988 0.013006831613801194 3.271513287155284e-07 6.485251311487733 -0.07627245268532845 GSPSVAAS(ph)SPPAIPK ddPTM_KYSE-520_SHP099_60min_R1 1 GSPSVAASSPPAIPK 15 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 GSPSVAAS(0.5)S(0.5)PPAIPK 208.68 5.2799e-14 736740000.0 544860.0 757480.0 542170.0 479510.0 496250.0 753120.0 572180.0 644070.0 785800.0 725070.0 True False 514635.529648518 721089.5237993394 577119.1457026708 525082.4862300613 535302.0517237386 748419.4987243214 630021.5383386657 641835.8714970683 643118.5284059859 718646.4438959245 0.7161178268114388 1.003399557493349 0.8030640805428519 0.7306548173862591 0.7448753921633011 1.0414293496910543 0.876678015580505 0.8931177172707474 0.8949025405587665 1.0 19.454922649706113 -6.24697422617762 24.98018894470095 0.9305111690349495 0.8073029725330083 0.3833015359495896 0.08902500745877683 1025.479800335685 1770924.1962376374 0.03023931220360914 0.030105860688517918 5.662728943096348e-07 6.24697422617762 -0.12320819650194115 GSPSVAASS(ph)PPAIPK ddPTM_KYSE-520_SHP099_60min_R1 1 GSPSVAASSPPAIPK 15 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 GS(0.001)PS(0.001)VAAS(0.451)S(0.548)PPAIPK 56.568999999999996 0.053471000000000005 1259100000.0 1393400.0 1647700.0 1260700.0 1369700.0 1319100.0 1539800.0 1288600.0 1495800.0 1837700.0 1594000.0 True False 1316105.3243259636 1568542.0187518778 1341966.739191321 1499875.8761846782 1422905.6653476742 1530189.53704019 1418864.2635240722 1490611.4189223454 1504020.0046470854 1579878.4001132348 0.8330421659234244 0.9928245228490089 0.8494114098244131 0.9493615939537988 0.9006425211242145 0.9685489319497733 0.8980844749965426 0.9434975621006709 0.9519846619456838 1.0 20.591382090824823 -13.999999814520308 0.05466695204943804 1.3113576705178385 0.7797771160338793 0.3042437312705284 0.04502181450958263 609.9056886888311 2.446873989249636 26.329140526219334 5.121581482859525 1.0000004270828652e-14 13.999999814520308 -0.5315805544839591 GSPTRPNPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 GSPTRPNPPVR 11 1 Q14195-2;Q14195;H0YBT4 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 0 68.548 0.028983999999999996 435720000.0 222110.0 187320.0 200120.0 177350.0 201460.0 217100.0 177900.0 185070.0 241840.0 186710.0 False True 209789.11553469193 178320.8660269478 213020.05540332114 194205.2906777782 217313.75584939902 215744.9983708438 195883.8681366853 184428.03536566268 197927.95229028218 185055.89465818208 1.133652704887865 0.9636054358404816 1.1511119696932208 1.0494412568510505 1.174314151142284 1.1658369422349273 1.058511907975175 0.9966071910668983 1.0695576742144646 1.0 17.497601565539316 -6.994749674761538 24.692912793009604 1.0253613601655518 1.1031962171264222 0.2756487441075206 0.061647088294603844 173.10534411675425 814132.120135206 0.026205439754203454 0.01759732334363956 1.0121626918353123e-07 6.994749674761538 0.07783485696087045 GSQPPPAAESQS(ph)SLRR ddPTM_KYSE-520_SHP099_60min_R1 1 GSQPPPAAESQSSLRR 16 1 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3;E9PQN0;E9PRG1;E9PIG0;E9PQD2;E9PJP4 O43491 EPB41L2 Band 4.1-like protein 2 1 GSQPPPAAES(0.058)QS(0.536)S(0.407)LRR 57.483999999999995 0.031279 888700000.0 452940.0 454200.0 481270.0 388370.0 380480.0 446750.0 385990.0 413230.0 422100.0 447020.0 True False 427814.5152864955 432379.5502319006 512293.434259226 425280.56803230155 410421.61136493244 443961.6675365018 425009.6360993772 411796.6015786072 345457.2802750914 443059.7505762976 0.9655910173064192 0.9758944468990808 1.1562626340868802 0.9598718174673501 0.9263346779550343 1.0020356553693515 0.9592603154462976 0.929438074758482 0.7797081089531323 1.0 18.757141746687324 -7.205855668136174 2.2826628113204985 0.8850279581086956 0.9984461059328591 0.23243349961152193 0.07660173110684095 0.4373239846419821 4.363263194652793 0.05009124544597427 0.02246314245410746 6.225071325740203e-08 7.205855668136174 0.11341814782416348 GSQPPPAAESQSS(ph)LRR ddPTM_KYSE-520_SHP099_60min_R1 3 GSQPPPAAESQSSLRR 16 1 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3;E9PQN0;E9PRG1;E9PIG0;E9PQD2;E9PJP4 O43491 EPB41L2 Band 4.1-like protein 2 1 GSQPPPAAESQS(0.003)S(0.997)LRR;GSQPPPAAES(0.046)QS(0.21)S(0.743)LRR;GSQPPPAAES(0.05)QS(0.254)S(0.696)LRR 198.51 2.0747e-12 1399490000.0 1084460.0 823790.0 809840.0 768740.0 756790.0 797550.0 753750.0 789930.0 767650.0 781500.0 True False 1024302.8419825857 784213.8918660011 862043.582189815 841800.8184698911 816345.0674539199 792572.1946138487 829946.4058910983 787189.9172010482 628264.1108817195 774576.5179977992 1.3224036853457726 1.0124421198477762 1.11292243201241 1.0867884565437895 1.0539243683297914 1.0232329230203963 1.0714840775659253 1.0162842519882391 0.8111065805425108 1.0 19.563048239834014 -1.0000000000000002 0.32563706743197635 0.9692552897325621 3.6861439544548977 0.5383160278406744 0.08120090718909291 49.716944059673196 0.7093872260618744 0.07501727617504955 80.92188411235573 0.09999999999999995 1.0000000000000002 2.716888664722336 GSRPAS(ph)PAAK ddPTM_KYSE-520_SHP099_60min_R1 4 GSRPASPAAK 10 1 A0A590UJ53;Q9P2N6-8;Q9P2N6-6;Q9P2N6-2;Q9P2N6-5;Q9P2N6-4;Q9P2N6-3;Q9P2N6 A0A590UJ53 KANSL3 KAT8 regulatory NSL complex subunit 3 1 GS(0.056)RPAS(0.944)PAAK;GS(0.134)RPAS(0.866)PAAK;GS(0.094)RPAS(0.906)PAAK;GS(0.008)RPAS(0.992)PAAK 83.53 0.009842100000000001 3077130000.0 3600020.0 3264910.0 3038750.0 2835560.0 2953730.0 3255160.0 2985960.0 3050670.0 3625070.0 3093840.0 True False 3400319.714138053 3108058.8228701777 3234632.6871719044 3105050.7698578015 3186171.74657523 3234843.338999706 3287809.9769613068 3040087.937801727 2966848.6685781167 3066430.984571094 1.1088851277745813 1.0135753384010715 1.0548525968616693 1.0125943761594587 1.0390489016731885 1.054921292954574 1.0721943502084645 0.9914092158271576 0.9675250098586823 1.0 21.548129050275875 -7.356630256807392 6.024982303353805 0.9829430018046876 1.0477176413383038 0.5375532953128674 0.02734246432103559 0.1849830961713171 9.592942153371233 0.014854999541287063 0.006989044512333981 4.399159851972051e-08 7.356630256807392 0.06477463953361617 GSRPGKS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 GSRPGKSPER 10 2 A0A088AWL3;O75376-2;O75376;E7EVK1;J3QKP0 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 GS(0.006)RPGKS(0.994)PER 49.31 0.051192 510010000.0 174870.0 153160.0 123370.0 130960.0 156750.0 155990.0 132990.0 148280.0 175540.0 143900.0 True False 165169.61250529758 145801.96370215324 131322.62759897916 143406.39902544013 169085.33321450057 155016.40854844742 146433.9270573231 147765.65128881222 143666.3610032919 142625.157952506 1.158067867383529 1.0222738105622649 0.9207535997450704 1.005477582525758 1.1855224957633754 1.086879837847876 1.0267047494249606 1.0360419817239956 1.007300276232701 1.0 17.121868958687287 -7.506870752558513 1.7271601843405449 1.0023872164305558 1.0560141702377943 0.08693487490179708 0.07129004314802459 1.229958575151775 6.544167716520009 0.06869640786418835 0.022600443990200874 3.112642531757665e-08 7.506870752558513 0.053626953807238475 GSRPIDTSR ddPTM_KYSE-520_SHP099_60min_R1 1 GSRPIDTSR 9 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;H7C044 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 73.95100000000001 0.020343 516160000.0 515750.0 442590.0 290550.0 246420.0 423050.0 455740.0 325840.0 407000.0 365530.0 362390.0 False True 487140.31937786436 421327.3120588657 309279.31789643684 269839.68271112576 456341.6281747652 452895.5576118305 358779.08709194814 405588.2119945142 299158.9662614403 359179.5065351538 1.3562586687561662 1.1730271476878633 0.8610717267249403 0.7512669230885418 1.2705113178000926 1.2609170327692527 0.9988851829352172 1.1292075539249016 0.8328954208643329 1.0 18.454345511978158 -4.503799807802751 4.997397026972206 1.024785544941362 1.3232651735619056 0.30030520157857343 0.16385161527611924 0.24352571076383206 16.862967750050085 0.04453908004234718 0.16116021863560095 3.13473037529026e-05 4.503799807802751 0.29847962862054356 GSRPPLILQSQSLPCS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 GSRPPLILQSQSLPCSSPR 19 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GSRPPLILQSQSLPCS(0.591)S(0.409)PR 152.13 7.0266e-07 3006600000.0 1325400.0 891070.0 933020.0 1036300.0 1060500.0 1096500.0 1027700.0 1136300.0 1303400.0 1062800.0 True False 1251877.419880605 848261.6596766612 993163.9620847816 1134789.6404250453 1143955.3165804008 1089656.3367739778 1131589.945385449 1132358.4405144139 1066735.4160401644 1053384.418845887 1.1884335836789683 0.8052726473835989 0.9428314529019858 1.077279690227759 1.0859808595173122 1.0344336951251198 1.074242152380843 1.0749717009817294 1.012674382642668 1.0 20.006600594437494 -5.260543722678167 24.9968204554822 1.0561823282845597 0.9614885664307475 0.10642206739432303 0.09153698247243029 136.8677591955365 3819775.219476268 0.02414072507743505 0.03893947733798171 5.488532969172136e-06 5.260543722678167 -0.09469376185381218 GSRPPLILQSQSLPCSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 GSRPPLILQSQSLPCSSPR 19 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 GSRPPLILQSQSLPCS(0.024)S(0.976)PR;GSRPPLILQSQSLPCS(0.19)S(0.81)PR 181.34 1.3665e-09 4967500000.0 1507220.0 1449880.0 1512160.0 1504150.0 1472390.0 1749730.0 1624620.0 1476040.0 1739320.0 1502410.0 True False 1423611.5020314185 1380225.588485751 1609636.2531415452 1647103.9637608137 1588258.716246881 1738809.28604061 1788852.444363247 1470919.961750326 1423503.3326891067 1489099.8162572922 0.9560215416650362 0.9268858765658934 1.080945840949205 1.1061071566717735 1.0665898275636183 1.1676915590594446 1.201297874617535 0.9877913795244032 0.9559489009050745 1.0 20.50600903217158 -4.764781600840932 24.933606391375537 1.0795927071648423 0.9414536832777155 0.3265662976740862 0.07343173614458168 87.03774491524348 649339.6714754173 0.020570131380354784 0.04581643411582012 1.7187725107344966e-05 4.764781600840932 -0.13813902388712684 GSRPQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 GSRPQSPR 8 1 H0YJL1;A0A3B3ISJ2;Q96KQ4 H0YJL1 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 GSRPQS(1)PR 81.017 0.006520300000000001 56984000.0 120220.0 84996.0 94332.0 100980.0 97664.0 132290.0 114480.0 85504.0 137610.0 143800.0 True False 113551.15694737156 80912.6645784029 100412.79165653663 110577.10883925592 105349.60116785327 131464.3290395162 126052.75561713158 85207.4065807837 112623.49286580257 142526.04387470707 0.796704615243464 0.5677044165312849 0.704522408162878 0.7758379158861866 0.7391603548644403 0.9223881156421131 0.8844191011710326 0.5978374496642067 0.7901958814264748 1.0 17.120866042386286 -5.439889076905711 1.8787997842514832 0.8117678883007377 0.6752779905661926 0.21113241752198797 0.11427917073730931 0.5894546427888672 4.120541868939448 0.0373597353335691 0.06404395160093727 3.631708003300271e-06 5.439889076905711 -0.136489897734545 GSS(ph)FQSGR ddPTM_KYSE-520_SHP099_60min_R1 3 GSSFQSGR 8 0 Q96KP1 Q96KP1 EXOC2 Exocyst complex component 2 1 GS(0.351)S(0.645)FQS(0.003)GR;GS(0.019)S(0.981)FQSGR;GS(0.004)S(0.996)FQSGR 187.97 6.5988e-06 2667390000.0 3205000.0 3363600.0 3049230.0 3257950.0 3247970.0 3203930.0 3181410.0 3159880.0 3797670.0 3078640.0 True False 3027212.2609909014 3202007.607133467 3245788.244740503 3567584.5884616133 3503566.7605786426 3183933.0844325093 3503017.970369489 3148919.11380154 3108108.85947004 3051365.6447456754 0.9920844020131232 1.0493687023864842 1.0637165854998778 1.1691763635750587 1.1481963056809132 1.0434452815955078 1.14801645499337 1.0319704291171552 1.0185960062905193 1.0 21.54102363755739 -9.473685152605306 7.337675706524074 0.9999999999990279 1.0778706387149215 0.12482858555969079 0.05777565479938952 0.0 0.0 0.058963341969372564 0.014300710998772823 3.3598109981166126e-10 9.473685152605306 0.07787063871589361 GSS(ph)GEGLPFAEEGNLTIK ddPTM_KYSE-520_SHP099_60min_R1 1 GSSGEGLPFAEEGNLTIK 18 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 GS(0.304)S(0.696)GEGLPFAEEGNLTIK 135.09 9.2949e-06 169790000.0 306770.0 303070.0 237050.0 223510.0 255030.0 300320.0 223310.0 256610.0 356830.0 316510.0 True False 289752.8565691662 288510.0622826556 252330.6222934101 244752.32319926823 275099.41007779347 298445.5914819525 245884.35409557712 255719.87980322438 292038.66695228784 313705.96764105366 0.9236447070101805 0.9196830536955946 0.804353912011422 0.7801965803829302 0.8769339395945623 0.951354523875165 0.7838051534197179 0.8151578426325071 0.9309311810301364 1.0 18.259053448324302 -7.9908772149366865 4.972790695831649 0.9997782318161988 0.8564276044324671 0.38737642164582453 0.057886165454573674 0.16161922508317747 12.628412975685157 0.05942380768880736 0.015494689877727712 1.0212281676458216e-08 7.9908772149366865 -0.14335062738373172 GSS(ph)GS(ph)VDETLFALPAASEPVIR ddPTM_KYSE-520_SHP099_60min_R1 1 GSSGSVDETLFALPAASEPVIR 22 0 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 2 GS(0.424)S(0.577)GS(0.999)VDETLFALPAASEPVIR 152.0 4.2996e-07 19682000.0 46221.0 48612.0 43180.0 48559.0 45055.0 50056.0 48044.0 50078.0 59715.0 36860.0 True False 43657.02899072085 46276.60655190037 45963.45189044278 53174.03276020431 48600.57217211693 49743.58193666955 52900.75638425467 49904.291106293036 48872.26129264883 36533.449076646066 1.194987883545562 1.2666914217382939 1.2581196972126245 1.455488986234144 1.3303034178392084 1.361590082346428 1.4480088171601453 1.3659890420309166 1.3377401402784694 1.0 15.15693034269034 -5.030773169883813 22.049962892093877 1.350648577085079 1.238730968308858 0.08335966177101006 0.12126656442023051 275.1621003458038 197163.46419898287 0.030421252417232425 0.052832611109366365 9.315943160772917e-06 5.030773169883813 -0.11191760877622081 GSS(ph)LSGTDDGAQEVVK ddPTM_KYSE-520_SHP099_60min_R1 2 GSSLSGTDDGAQEVVK 16 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 GS(0.129)S(0.871)LSGTDDGAQEVVK;GS(0.019)S(0.981)LSGTDDGAQEVVK 239.7 3.9011e-20 920550000.0 2260570.0 2485300.0 1916140.0 1752960.0 2014580.0 2577000.0 2269440.0 2658600.0 2695400.0 2645000.0 True False 2135171.6757654287 2365902.457488648 2039657.4503324016 1919560.7913533568 2173115.9846077743 2560915.9871103847 2498857.142799995 2649377.9371219054 2205983.305504575 2621567.3577788607 0.8144637861124675 0.9024763184010552 0.7780297707324652 0.732218756713433 0.8289376880435986 0.9768644622124594 0.9531920419230301 1.010608378709219 0.8414749668586078 1.0 21.32199818383574 -6.207732877183829 5.506057530301298 0.9569113925373888 0.8087229641603939 0.6063501134321404 0.05858219465484101 0.1518034472880174 10.398208250309876 0.020022824595064718 0.019821824458801606 6.198221937620371e-07 6.207732877183829 -0.14818842837699486 GSS(ph)LSGTDDGAQEVVKDILEDVVTSAIK ddPTM_KYSE-520_SHP099_60min_R1 1 GSSLSGTDDGAQEVVKDILEDVVTSAIK 28 1 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 GS(0.156)S(0.806)LS(0.038)GTDDGAQEVVKDILEDVVTSAIK 280.49 1.8455e-42 323500000.0 383200.0 516880.0 366250.0 342470.0 360050.0 423250.0 345090.0 433400.0 582470.0 446630.0 True False 361943.1321097382 492048.3089473022 389859.0610207198 375018.24583263975 388383.8865957317 420608.33975338424 379975.0649538435 431896.6365563201 476708.130873803 442673.20567288186 0.8176305398009563 1.1115384953091256 0.8806927006754739 0.8471672579834514 0.8773602775559273 0.950155406659506 0.8583647261330521 0.9756557004615156 1.0768849904732467 1.0 18.7558825264072 -7.519661637597451 5.817006564920043 1.0361469544416384 0.9115009644576098 0.31309989489214307 0.07898934651674118 0.1902213169737196 25.325002139220704 0.05006760655919626 0.020376860272672187 3.0223055064318434e-08 7.519661637597451 -0.12464598998402865 GSS(ph)PGPRPVEGTPASR ddPTM_KYSE-520_SHP099_60min_R1 8 GSSPGPRPVEGTPASR 16 1 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 GS(0.034)S(0.966)PGPRPVEGTPASR;GS(0.083)S(0.917)PGPRPVEGTPASR;GS(0.022)S(0.978)PGPRPVEGTPASR;GS(0.012)S(0.988)PGPRPVEGTPASR;GS(0.165)S(0.835)PGPRPVEGTPASR;GS(0.039)S(0.961)PGPRPVEGTPASR;GS(0.185)S(0.814)PGPRPVEGTPASR;GS(0.127)S(0.873)PGPRPVEGTPASR 161.26 1.907e-06 48950620000.0 15445230.0 14928350.0 15172030.0 11856950.0 12482100.0 13816670.0 12948160.0 13199170.0 16261430.0 13307160.0 True False 14588452.302597336 14211169.658089815 16150043.32990629 12983830.963077987 13464370.256565984 13730435.037496498 14257086.374663878 13153385.15997945 13308764.229291093 13189268.915213808 1.1060849844201426 1.0774797109259973 1.224483588417644 0.9844238559804593 1.0208579674218976 1.041030789936996 1.0809610802777965 0.9972793218892545 1.0090600407684043 1.0 23.652861262036247 -5.281570728068633 24.999335748363322 1.022540345288556 1.1301624718344694 0.6028767136472721 0.0433476207530702 568.6385710153595 706140.5022111356 0.012293721064325972 0.01826165202551351 5.229127990302516e-06 5.281570728068633 0.10762212654591341 GSS(ph)PLPTATTPKPLIPTEASIR ddPTM_KYSE-520_SHP099_60min_R1 1 GSSPLPTATTPKPLIPTEASIR 22 1 A0A3B3IUD2;Q9BUK6-7;Q9BUK6-3;Q9BUK6-2;Q9BUK6 A0A3B3IUD2 MSTO1 Protein misato homolog 1 1 GS(0.002)S(0.998)PLPTATTPKPLIPTEASIR 142.4 6.542e-07 297280000.0 152800.0 159200.0 128480.0 105550.0 97867.0 148890.0 130850.0 158070.0 181830.0 167720.0 True False 144323.87940075167 151551.7930359282 136762.0263752684 115581.44026523542 105568.57611294127 147960.72228205865 144077.59497293585 157521.69206381534 148814.25556128842 166234.1312841856 0.8681964304552039 0.911676752933745 0.8227072582432957 0.6952930747274947 0.6350595710845115 0.8900742653692 0.866714878947621 0.9475893479090891 0.895208790226617 1.0 17.342857101906016 -6.498776952177358 24.31285476202787 0.9166370137491903 0.787680498066517 0.40671361549229534 0.0811000410825176 656.0200613210591 661766.3549153401 0.03215633706744179 0.02819110568412023 3.1711957284850356e-07 6.498776952177358 -0.1289565156826733 GSS(ph)PTPPCSPVQPSK ddPTM_KYSE-520_SHP099_60min_R1 5 GSSPTPPCSPVQPSK 15 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GS(0.016)S(0.983)PTPPCSPVQPSK;GS(0.004)S(0.996)PTPPCSPVQPSK;GSS(1)PTPPCSPVQPSK;GS(0.002)S(0.997)PTPPCSPVQPSK;GS(0.031)S(0.966)PT(0.003)PPCSPVQPSK 346.16 1.3923999999999999e-54 2863080000.0 3084980.0 3880520.0 2848520.0 2188210.0 2385970.0 2916850.0 2182470.0 2665030.0 3153470.0 2584920.0 True False 2913850.0096448367 3694093.9944207272 3032140.1569931447 2396176.820490675 2573732.264687736 2898644.857199433 2403095.366454591 2655785.632952675 2580879.340509577 2562019.6198373316 1.1373254080817083 1.4418679567548642 1.183496072206372 0.9352687239150861 1.0045716452597455 1.1313905774786668 0.9379691505278828 1.0365984758232636 1.0073612709778714 1.0 21.288850093143328 -5.0482385340312765 5.203805704184014 1.0129624623193128 1.2961083165721214 0.6470410651394742 0.08566867971612378 0.10673741868977785 6.693029397069131 0.022042857963459887 0.040637893562275665 8.948731260419737e-06 5.0482385340312765 0.2831458542528087 GSS(ph)YSSIPK ddPTM_KYSE-520_SHP099_60min_R1 6 GSSYSSIPK 9 0 Q14315;Q14315-2 Q14315 FLNC Filamin-C 1 GS(0.03)S(0.97)YSSIPK;GSS(1)YSSIPK;GSS(1)YSSIPK;GS(0.016)S(0.942)Y(0.005)S(0.015)S(0.022)IPK;GSS(0.995)YS(0.005)SIPK;GSS(0.999)YS(0.001)SIPK 196.88 3.0627e-06 5633640000.0 9333280.0 8248160.0 8281000.0 8053530.0 8359090.0 11190790.0 12118680.0 16126000.0 17151400.0 14733300.0 True False 8815544.352967601 7851906.012859429 8814806.51006846 8818935.06981792 9016902.826283885 11120944.128597235 13343754.44131921 16070062.669836694 14037138.111609101 14602774.42433396 0.6036896891509493 0.537699603150417 0.603639161567786 0.6039218859069759 0.6174787450840973 0.7615637827059338 0.9137821384875515 1.100480100757953 0.9612651475474218 1.0 23.79973916125973 -6.63848584514704 1.6210147158281885 1.0270433384865043 0.5851320366303897 0.9572188189356722 0.04029780676624559 0.06559186451009305 0.3518443329284456 0.02023656735275956 0.013667954781289864 2.2988686345015469e-07 6.63848584514704 -0.4419113018561146 GSSGCSEAGGAGHEEGRAS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 1 GSSGCSEAGGAGHEEGRASPLR 22 1 Q9C0C9 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 GSSGCSEAGGAGHEEGRAS(1)PLR 75.896 0.007237 8657600.0 1818.6 5194.0 6811.9 2515.0 1877.9 2649.0 0.0 0.0 2453.5 3435.5 True False 1717.7186327107788 4944.472443647058 7251.005973425356 2754.024843837679 2025.680046210596 2632.4666084033415 0.0 0.0 2008.0062477018143 3405.0641427785536 0.5044599927298608 1.452093774542625 2.129477058105722 0.8088026328897221 0.5949021696130601 0.7731033830849461 0.0 0.0 0.5897117245090334 1.0 11.733466259873568 -5.505577257024242 5.422536011874843 0.45002639546069956 1.3905603093834373 0.40487836604812444 0.4682967816750731 0.16764637884617367 15.539018957333628 0.14128351124771085 0.1997972249204735 3.1219269945069395e-06 5.505577257024242 0.9405339139227378 GSSGCSEAGGAGHEEGRAS(ph)PLRR ddPTM_KYSE-520_SHP099_60min_R1 2 GSSGCSEAGGAGHEEGRASPLRR 23 2 Q9C0C9 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 GSSGCSEAGGAGHEEGRAS(1)PLRR;GSSGCSEAGGAGHEEGRAS(1)PLRR 107.75 0.00034193 35884000.0 6136.1 12482.2 16963.4 24299.0 5986.9 11003.3 6978.7 6494.5 9980.0 8636.1 True False 5795.71830098791 11882.536375835818 18056.887906399657 26608.36965423925 6458.0349691986885 10934.6243232331 7684.175101548542 6471.972095327695 8167.883575326726 8559.590872784132 0.6771022572370644 1.388213122851145 2.1095503482313505 3.108602975271 0.7544793980437196 1.2774704405558175 0.8977269142595307 0.7561076448064615 0.954237614474908 1.0 13.06332612569139 GSSPSIRPIQGSQGSSS(ph)PVEK ddPTM_KYSE-520_SHP099_60min_R1 1 GSSPSIRPIQGSQGSSSPVEK 21 1 Q92560;F8W6N3;H0Y8E8 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 GSSPSIRPIQGS(0.006)QGS(0.026)S(0.082)S(0.886)PVEK 181.44 2.8607999999999996e-10 3075800000.0 1538400.0 1346300.0 1301100.0 1244900.0 1137700.0 1462700.0 1369300.0 1430000.0 1792900.0 1633100.0 True False 1453061.8852756321 1281621.727162502 1384970.987833604 1363214.9217071673 1227230.5173724885 1453570.7467389842 1507722.207080176 1425039.663764508 1467354.5553309896 1618632.0045325756 0.897709844613658 0.7917931460477982 0.8556429033624307 0.842201882756441 0.7581899492509324 0.8980242221015163 0.9314793003339708 0.8803975577982145 0.9065399369480085 1.0 20.626343595988793 -6.495175148652008 18.68828070448989 0.9189395831244206 0.8291228922482842 0.5250308543916442 0.045134031520625444 26.534763652303287 17899.84504619592 0.015281038966214949 0.013394216986777908 3.1976052724369594e-07 6.495175148652008 -0.08981669087613642 GSSPT(ph)PPCS(ph)PVQPSK ddPTM_KYSE-520_SHP099_60min_R1 2 GSSPTPPCSPVQPSK 15 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 2 GS(0.001)S(0.392)PT(0.61)PPCS(0.997)PVQPSK;GS(0.018)S(0.018)PT(0.964)PPCS(1)PVQPSK 190.82 1.1385e-08 1559480000.0 1398330.0 1260290.0 1183240.0 1226750.0 1255640.0 1300040.0 1344790.0 1501370.0 1638890.0 1362530.0 True False 1320761.8473982532 1199743.7766661441 1259513.5436509373 1343339.9511641648 1354451.7243856834 1291925.968134646 1480734.4970856276 1496162.0978923924 1341308.8890548316 1350459.044232298 0.9780095538914126 0.8883970097354329 0.93265586174584 0.9947283902473473 1.0029565355354078 0.9566569039263783 1.096467533324854 1.107891501250912 0.9932244111981434 1.0 20.36501845679866 -5.920218437183088 0.9638990866324757 1.0502287624026345 0.9289093638185625 0.43607858151684775 0.047577957164818475 0.4805748515856653 0.9689705689159415 0.024682124741058888 0.032373841674482214 1.201659883480784e-06 5.920218437183088 -0.12131939858407204 GSTAENAEY(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 3 GSTAENAEYLR 11 0 P00533;E9PFD7 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 GSTAENAEY(1)LR;GSTAENAEY(1)LR;GSTAENAEY(1)LR 202.96 5.3815e-11 20991170000.0 10364000.0 12048340.0 9879700.0 10733860.0 10787490.0 9440110.0 8503720.0 11082150.0 11714430.0 9119460.0 True False 9789088.259878207 11469519.661472969 10516561.270078924 11754002.827147314 11636404.090577964 9381190.771858985 9363359.005909465 11043708.608243244 9587384.808748962 9038668.679232527 1.0830232423907586 1.2689390515912622 1.163507773466909 1.3004130635027709 1.287402437630451 1.0378951928411144 1.0359223618211557 1.2218291210980603 1.0607076273054659 1.0 23.10767886062471 -6.265822755495647 24.995635131525898 1.0829258974772356 1.224595367054737 0.45344178838105875 0.08144651080653066 379.9909814146212 2166841.8049522974 0.02830695622801624 0.02581900888808748 5.422221372496545e-07 6.265822755495647 0.14166946957750137 GSTFRPHDS(ph)FPK ddPTM_KYSE-520_SHP099_60min_R1 1 GSTFRPHDSFPK 12 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 GSTFRPHDS(1)FPK 83.96600000000001 0.0031549 731840000.0 480640.0 475150.0 404240.0 525290.0 415310.0 368120.0 367610.0 380450.0 469380.0 369760.0 True False 453977.9410679142 452323.0807853093 430297.95720686816 575213.4036658031 447992.5342093419 365822.4265328194 404771.6063278628 379130.30774769787 384152.4241068994 366484.214068927 1.2387380510270265 1.234222548805985 1.1741241251006225 1.569544830538374 1.222406087387669 0.9981942263521802 1.1044721458363684 1.034506516770167 1.0482100165838233 1.0 18.483391531527257 -6.122946640315984 4.9204257955467385 1.0448949112934094 1.3010764888741162 0.6038930693854548 0.10275904794777395 0.16940109101685677 6.091084126647924 0.03532887480454798 0.035526266290154214 7.534481306120149e-07 6.122946640315984 0.2561815775807068 GSVIS(ph)PTELEAPILVPHTAQR ddPTM_KYSE-520_SHP099_60min_R1 4 GSVISPTELEAPILVPHTAQR 21 0 Q8N1B4-2;Q8N1B4 Q8N1B4-2 VPS52 Vacuolar protein sorting-associated protein 52 homolog 1 GS(0.045)VIS(0.936)PT(0.02)ELEAPILVPHTAQR;GS(0.026)VIS(0.94)PT(0.034)ELEAPILVPHTAQR;GS(0.054)VIS(0.892)PT(0.054)ELEAPILVPHTAQR;GS(0.027)VIS(0.828)PT(0.145)ELEAPILVPHTAQR 214.17 3.9324e-19 642370000.0 211625.0 244362.0 201870.0 184264.0 204871.0 214880.0 193847.0 215109.0 290324.0 244880.0 True False 199885.73938602148 232622.4827251601 214882.86320342016 201776.3951590084 220993.1821434641 213538.85421431117 213442.9465244071 214362.83708581806 237608.48007246037 242710.5537137574 0.8235560272412311 0.958435795913124 0.8853461867045301 0.831345782338641 0.9105215194065857 0.8798086895971977 0.8794135370649466 0.8832036094261833 0.9789787730148966 1.0 17.88887731658662 -7.807678929685199 4.200831845930407 0.997901002537274 0.882955801904755 0.596330815715671 0.035689927145902745 0.13984879338486003 4.869023063861055 0.032077415956344 0.00876989874384757 1.5571163694272173e-08 7.807678929685199 -0.114945200632519 GSVPLS(ph)S(ph)SPPATHFPDETEITNPVPK ddPTM_KYSE-520_SHP099_60min_R1 4 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 2 GS(0.444)VPLS(0.569)S(0.544)S(0.441)PPAT(0.003)HFPDETEITNPVPK;GS(0.154)VPLS(0.835)S(0.56)S(0.45)PPAT(0.001)HFPDETEITNPVPK;GS(0.026)VPLS(0.962)S(0.565)S(0.446)PPAT(0.001)HFPDETEITNPVPK;GS(0.015)VPLS(0.639)S(0.624)S(0.627)PPAT(0.093)HFPDETEITNPVPK 109.62 0.00031128 1697410000.0 679471.0 758172.0 661297.0 805552.0 731732.0 704410.0 674210.0 604762.0 745701.0 793890.0 True False 641779.3891381432 721748.2790806271 703925.2627326103 882111.4198819593 789315.1454144382 700013.5159023773 742365.7264555055 602664.2217745124 610300.4959924554 786856.7522370735 0.8156241746843145 0.9172549857755689 0.8946040822949225 1.121057190364157 1.0031243211300855 0.8896327240151445 0.9434572739509729 0.7659135161020193 0.775618299337637 1.0 19.58574149054111 -7.237817132928445 22.542792446168985 0.8280744624558768 0.94538225515612 0.15442413613774963 0.09679271493749529 331.73785114614026 316579.13795559714 0.04693427320854119 0.027064520707957333 5.7833951582470294e-08 7.237817132928445 0.11730779270024316 GSVPLSS(ph)S(ph)PPATHFPDETEITNPVPK ddPTM_KYSE-520_SHP099_60min_R1 4 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 2 GS(0.001)VPLS(0.074)S(0.89)S(0.778)PPAT(0.257)HFPDETEITNPVPK;GS(0.005)VPLS(0.129)S(0.873)S(0.986)PPAT(0.006)HFPDETEITNPVPK;GS(0.06)VPLS(0.183)S(0.777)S(0.966)PPAT(0.014)HFPDETEITNPVPK;GS(0.014)VPLS(0.13)S(0.877)S(0.963)PPAT(0.016)HFPDETEITNPVPK 160.41 3.3217000000000005e-10 3326589000.0 726460.0 784510.0 754030.0 871010.0 797270.0 743270.0 766770.0 753590.0 908950.0 862130.0 True False 686161.8156378929 746820.962026483 802635.9802906562 953790.5285212938 860010.613154227 738630.9762279919 844282.5945540547 750975.9721792275 743907.5927648525 854492.1989269912 0.8030053597909083 0.8739938913009225 0.9393134089445729 1.1162074150226229 1.0064581212492816 0.8644092680489192 0.9880518460136242 0.8788564402603654 0.8705844169191915 1.0 19.7047077953368 -4.589612505979868 2.78604849620649 0.9589985156461324 0.8104597572162758 0.32374695492190086 0.07282338722027454 0.35962375930338847 5.256582774108082 0.020965739065604116 0.08646002357023387 2.5726902108797396e-05 4.589612505979868 -0.14853875842985653 GSVPLSS(ph)SPPATHFPDETEITNPVPK ddPTM_KYSE-520_SHP099_60min_R1 5 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GS(0.001)VPLS(0.098)S(0.344)S(0.344)PPAT(0.212)HFPDETEITNPVPK;GSVPLS(0.075)S(0.507)S(0.417)PPATHFPDETEITNPVPK;GS(0.008)VPLS(0.101)S(0.424)S(0.382)PPAT(0.084)HFPDET(0.001)EITNPVPK;GS(0.044)VPLS(0.092)S(0.438)S(0.387)PPAT(0.04)HFPDETEITNPVPK;GS(0.027)VPLS(0.074)S(0.449)S(0.449)PPAT(0.002)HFPDETEITNPVPK 167.87 2.2336000000000002e-10 10672670000.0 1462190.0 2116090.0 1364024.0 1472280.0 1520340.0 1839140.0 1483710.0 1632900.0 1914290.0 2143370.0 True False 1381079.4058965007 2014429.8600841558 1451951.1695555642 1612205.048542877 1639982.108448701 1827661.2450656556 1633697.8864141717 1627235.8510217236 1566703.1913238657 2124381.4093166254 0.6501089681164027 0.9482430279467381 0.6834700977837262 0.758905647296873 0.7719810111576213 0.860326322312141 0.7690228690806056 0.765981025763719 0.737486773539336 1.0 21.018611378747956 -10.83491256380137 2.516775962488773 1.0859043825468326 0.7763090348732351 0.4251577456522233 0.07946965680150309 20547341.724326164 12724451.050498573 10646747.710360864 0.019134391420194602 1.462471583181086e-11 10.83491256380137 -0.30959534767359753 GSVPLSSS(ph)PPATHFPDETEITNPVPK ddPTM_KYSE-520_SHP099_60min_R1 6 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GS(0.095)VPLS(0.113)S(0.366)S(0.412)PPAT(0.014)HFPDETEITNPVPK;GSVPLS(0.004)S(0.026)S(0.969)PPATHFPDETEITNPVPK;GS(0.001)VPLS(0.003)S(0.014)S(0.982)PPATHFPDETEITNPVPK;GSVPLS(0.01)S(0.094)S(0.896)PPATHFPDETEITNPVPK;GSVPLS(0.014)S(0.148)S(0.839)PPATHFPDETEITNPVPK;GSVPLS(0.02)S(0.163)S(0.817)PPATHFPDETEITNPVPK 336.05 2.9884999999999996e-73 136562110000.0 6033746.0 8759724.0 5595575.0 6860892.0 5696213.0 7414051.0 6240624.0 7788304.0 8168049.0 8635462.0 True False 5699042.0814055465 8338893.710426212 5956274.717736558 7512949.112877599 6144472.556081474 7367777.15760642 6871487.176540947 7761288.19122782 6684937.201359105 8558958.52496777 0.6658569573366413 0.9742883653543133 0.695911155587588 0.8777877695003657 0.7178995596435154 0.8608263652772129 0.8028415088700086 0.9068028742734264 0.7810456356177142 1.0 23.029003825965045 -13.999999997903288 0.19856398920823706 1.8440160527385288 0.7836021156471112 0.29246857060250986 0.0919307249026805 172.9837010135802 1.7089827182876687 57.76040773934135 0.20515459171955774 1.0000000048278581e-14 13.999999997903288 -1.0604139370914174 GSVPLSSSPPAT(ph)HFPDETEITNPVPK ddPTM_KYSE-520_SHP099_60min_R1 1 GSVPLSSSPPATHFPDETEITNPVPK 26 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 GSVPLS(0.003)S(0.074)S(0.074)PPAT(0.85)HFPDETEITNPVPK 143.09 1.0772e-07 2916400000.0 2182200.0 3097000.0 1740600.0 2090700.0 1732300.0 2649900.0 1999700.0 2356300.0 2887800.0 2700300.0 True False 2061149.0158921508 2948215.4713082258 1852801.861058467 2289399.499408122 1868622.1545612714 2633360.991169506 2201849.1911912835 2348126.5452645556 2363448.31551388 2676377.442801609 0.7701264339362229 1.101569391581054 0.6922797328313192 0.8554098023676355 0.6981908174376233 0.9839273598169794 0.8226975597606317 0.877352539186908 0.8830773558754262 1.0 21.351850159316665 -6.297010433914445 24.996640714387976 0.9000758765435346 0.8334435874439574 0.11970171450446998 0.11764871453307216 1806.8357656657854 1269702.0687129048 0.04073218827073901 0.03592380450627749 5.046491732336795e-07 6.297010433914445 -0.06663228909957719 GSVPS(ph)PSPRPQALDATQVPS(ph)PLPLAQPST(ph)PPVR ddPTM_KYSE-520_SHP099_60min_R1 1 GSVPSPSPRPQALDATQVPSPLPLAQPSTPPVR 33 1 O95402;B8ZZF3 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 3 GS(0.117)VPS(0.649)PS(0.232)PRPQALDAT(0.006)QVPS(0.996)PLPLAQPS(0.228)T(0.772)PPVR 94.848 0.0096076 138140000.0 79118.0 75128.0 67603.0 69790.0 72298.0 61382.0 52630.0 71606.0 85067.0 60498.0 True False 74729.1668221772 71518.73811057297 71960.79754862442 76422.82061687132 77987.44128065047 60998.89216950316 57950.35401930153 71357.61549896601 69620.97716456097 59962.03478673178 1.246274698448243 1.1927336749819308 1.2001059971458423 1.2745201340929466 1.30061365592462 1.017291897889376 0.9664507588078817 1.1900465978642174 1.1610842996269781 1.0 15.871761720922578 -6.262665474202506 24.99430197406533 1.0725698741686718 1.2394502395569844 0.60681615434126 0.07068715899454686 89.33263339469248 1821060.7795918747 0.026311511451050703 0.02448391139622764 5.461784061911808e-07 6.262665474202506 0.16688036538831263 GSVPS(ph)PSPRPQALDATQVPS(ph)PLPLAQPSTPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 GSVPSPSPRPQALDATQVPSPLPLAQPSTPPVR 33 1 O95402;B8ZZF3 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 2 GS(0.001)VPS(0.997)PS(0.002)PRPQALDAT(0.001)QVPS(0.998)PLPLAQPS(0.001)T(0.001)PPVR 114.91 0.00019628 198090000.0 87168.0 79360.0 74202.0 70103.0 90384.0 65484.0 68512.0 57807.0 101220.0 74188.0 True False 82332.61727490008 75547.4264782115 78985.17964739779 76765.56804276459 97496.70658538704 65075.29006594359 75437.86157268446 57606.48100925522 82840.99954855419 73530.75203739057 1.1197031853153594 1.0274262724770644 1.0741788633853986 1.0439926957870511 1.325931040876744 0.8850078132323826 1.0259362169221948 0.7834338615218049 1.1266170582129955 1.0 16.16606011974621 -6.342546638945222 24.999999912918003 0.9545221309293217 1.106652618910335 0.30853683308693014 0.11419279016503531 124.44842976708783 38357.834607585006 0.03853091214562256 0.03398107401065737 4.5441573481971815e-07 6.342546638945222 0.15213048798101325 GSVPS(ph)PSPRPQALDATQVPSPLPLAQPST(ph)PPVR ddPTM_KYSE-520_SHP099_60min_R1 1 GSVPSPSPRPQALDATQVPSPLPLAQPSTPPVR 33 1 O95402;B8ZZF3 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 2 GS(0.001)VPS(0.743)PS(0.256)PRPQALDAT(0.001)QVPSPLPLAQPS(0.256)T(0.744)PPVR 168.13 3.2242e-10 126450000.0 44526.0 43042.0 35672.0 41821.0 42834.0 26840.0 33746.0 41983.0 49769.0 37695.0 True False 42056.05401961958 40974.197712640875 37971.474197218005 45795.65526605784 46204.79210787828 26672.48160420753 37157.375009221934 41837.37077190588 40732.204174392326 37361.05162626625 1.1256656916491228 1.0967088968083127 1.0163384740091899 1.2257592672755961 1.2367101592877687 0.7139114249518542 0.9945484238751694 1.119812450420764 1.090231736029508 1.0 15.189247443661438 GSVPSPSPRPQALDATQVPS(ph)PLPLAQPS(ph)TPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 GSVPSPSPRPQALDATQVPSPLPLAQPSTPPVR 33 1 O95402;B8ZZF3 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 2 GSVPSPSPRPQALDATQVPS(1)PLPLAQPS(0.527)T(0.473)PPVR 124.59 7.4396e-05 337980000.0 87505.0 86424.0 84975.0 68200.0 98803.0 64695.0 62981.0 65673.0 97889.0 77046.0 True False 82650.92321310718 82272.06131493134 90452.62446480728 74681.70749492229 106578.23398782968 64291.21450760824 69347.73411532649 65445.19569119343 80114.8251808775 76363.43238088101 1.0823364094068715 1.0773751093924069 1.1845018177503208 0.9779773533807291 1.3956710779610464 0.8419110103241604 0.9081275153981812 0.8570227090470444 1.0491255131289214 1.0 16.220594329954807 -6.307228651442824 24.99995791093225 0.9208568800777367 1.1329693552053028 0.4534496498512123 0.11598733910439761 387.4324765892529 211528.68726011383 0.03880037568019077 0.034218873868131425 4.929142215126507e-07 6.307228651442824 0.21211247512756615 GSVSS(ph)VSPKPPSSFK ddPTM_KYSE-520_SHP099_60min_R1 1 GSVSSVSPKPPSSFK 15 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 GS(0.001)VS(0.035)S(0.528)VS(0.437)PKPPSSFK 68.243 0.015696 1751000000.0 3439300.0 3217700.0 2799600.0 2525100.0 2254900.0 2900300.0 2300500.0 2777300.0 3059800.0 2929100.0 True False 3248515.172925429 3063116.8621338345 2980066.6955183814 2765084.7448010016 2432347.8013740215 2882198.15188834 2533056.9907163815 2767666.1945266905 2504217.4512810307 2903150.4528053133 1.1189620468296397 1.0551009711446218 1.0264940601472252 0.9524427995556004 0.8378304331501816 0.9927829090301789 0.8725200542978023 0.9533319886512583 0.8625861773237437 1.0 21.469187909422274 -5.035443622400925 1.6655327632282448 0.9173773435275242 1.0996663276513918 0.6298479445037746 0.05200294530876848 0.23763307783875465 1.2581702561385282 0.014924466901705614 0.042821671166710325 9.216295215865108e-06 5.035443622400925 0.18228898412386763 GSVSSVS(ph)PKPPSSFK ddPTM_KYSE-520_SHP099_60min_R1 1 GSVSSVSPKPPSSFK 15 1 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 GSVS(0.042)S(0.339)VS(0.619)PKPPSSFK 105.79 0.00040231 1627400000.0 2370600.0 2186000.0 1981900.0 1768000.0 1991600.0 2109800.0 1897100.0 2073100.0 2332200.0 2100100.0 True False 2239098.0923260604 2080981.2787471036 2109656.445152118 1936030.1884314173 2148327.5893460917 2096631.9556094292 2088877.3819117795 2065908.8999651754 1908731.269977654 2081494.7478530775 1.0757164266859383 0.9997533171263087 1.013529554820202 0.9301153367926116 1.0321080999901382 1.0072722776610246 1.0035467944688867 0.9925121848594728 0.9170002816228014 1.0 20.98918848751603 -3.971448125359731 1.5799942583787148 0.9872462682378008 1.1743013494197418 0.37591474388670343 0.03421713386881415 2.626551515154048 3.467160154242765 0.009466297980536532 0.9426934537249273 0.00010679523473150734 3.971448125359731 0.18705508118194103 GSVTLSDLPGFLGDLASEEDS(ph)IEKDKEEAAISR ddPTM_KYSE-520_SHP099_60min_R1 1 GSVTLSDLPGFLGDLASEEDSIEKDKEEAAISR 33 2 A0A2R8Y6S1;A0A2R8YFV7;A0A2R8Y5N2;A0A2R8Y5S3;Q92574-2;Q92574 A0A2R8Y6S1 TSC1 Hamartin 1 GSVTLSDLPGFLGDLAS(0.005)EEDS(0.995)IEKDKEEAAISR 143.54 9.2484e-07 25491000.0 27774.0 32424.0 21814.0 21911.0 22190.0 33950.0 23022.0 28201.0 36772.0 26056.0 True False 26233.320853903668 30866.302370583788 23220.165343634046 23993.41485221763 23936.226756170774 33738.105456886915 25349.288433067835 28103.177313162865 30095.131746684772 25825.164111261267 1.0158046137048329 1.195202564351732 0.8991294399367905 0.9290711473835364 0.9268567143677199 1.3064043005316333 0.9815731789295418 1.0882090503699162 1.1653413553163656 1.0 14.656489896568168 GSYGS(ph)DAEEEEYR ddPTM_KYSE-520_SHP099_60min_R1 3 GSYGSDAEEEEYR 13 0 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 GS(0.001)YGS(0.999)DAEEEEYR;GSYGS(1)DAEEEEYR;GSYGS(1)DAEEEEYR 280.97 1.8703999999999997e-34 3848850000.0 3865410.0 3442000.0 3294870.0 3459080.0 3336270.0 3453940.0 3427600.0 3755750.0 3904670.0 3518660.0 True False 3650988.0017962004 3276641.1534526674 3507262.592178397 3787829.9231896754 3598815.4682203615 3432382.679286011 3774095.258152345 3742722.1798486374 3195680.3567205435 3487487.409876056 1.0468820594038948 0.9395420738075491 1.0056703236394031 1.0861200279786225 1.0319221391392097 0.9841993033626454 1.082181758553352 1.073185861330938 0.9163274246297901 1.0 21.73375657802452 -5.005789810122381 24.847536985220597 1.030195729835729 0.9880605999662617 0.04644796186212918 0.054303463931626425 571.5156857553552 2452757.738527942 0.014009380109091656 0.027691382166677755 9.867569407845595e-06 5.005789810122381 -0.042135129869467214 GT(ph)FSDQELDAQS(ph)LDDEDDNMHHAVYPAVNR ddPTM_KYSE-520_SHP099_60min_R1 2 GTFSDQELDAQSLDDEDDNMHHAVYPAVNR 30 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 2 GT(0.535)FS(0.465)DQELDAQS(1)LDDEDDNMHHAVYPAVNR;GT(0.5)FS(0.5)DQELDAQS(1)LDDEDDNMHHAVYPAVNR 195.07 2.2545000000000002e-15 930910000.0 484160.0 416390.0 411720.0 452580.0 461100.0 437920.0 474100.0 534240.0 533310.0 491460.0 True False 457302.67965096876 396385.9993858682 438260.1299752922 495593.06712686137 497385.9466998802 435186.7788418239 522026.65477010905 532386.8461325527 436474.3476510514 487106.04675009433 0.938815444197481 0.8137570905360383 0.8997222122355173 1.0174233525397423 1.0211040286162982 0.8934128035267295 1.071689949761454 1.092958811914912 0.8960561063923334 1.0 18.89387636679651 -5.175749806202898 4.581956200263401 1.002335457900703 0.8727335925802807 0.38233321768336304 0.06695251076377776 0.217970980451527 8.088846836618849 0.01832798464561789 0.03268088334939682 6.671910222693869e-06 5.175749806202898 -0.1296018653204224 GT(ph)FSDQELDAQSLDDEDDNMHHAVYPAVNR ddPTM_KYSE-520_SHP099_60min_R1 1 GTFSDQELDAQSLDDEDDNMHHAVYPAVNR 30 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 GT(0.5)FS(0.5)DQELDAQSLDDEDDNMHHAVYPAVNR 152.89 1.1867e-06 1092200000.0 83344.0 91399.0 60660.0 46130.0 51618.0 79923.0 89995.0 51964.0 105110.0 84196.0 True False 78720.74217785514 87008.05484730404 64570.24065943161 50514.18133050978 55680.042933754994 79424.1709110684 99092.57286655989 51783.7490124888 86024.67360747406 83450.08894349671 0.9433272411627533 1.0426358551423043 0.7737587997437789 0.6053220789819945 0.6672256870984936 0.951756575895872 1.1874471809569258 0.6205355760321729 1.0308517905321897 1.0 16.34862596680387 -6.329114246341287 24.819927948292108 0.9487350138437256 0.8065844673237262 0.15567348335781428 0.17592684954082274 384.4188989209482 140984.86618445104 0.0661651350660053 0.05835214880939517 4.686900714156126e-07 6.329114246341287 -0.14215054651999937 GT(ph)GQSDDSDIWDDTALIK ddPTM_KYSE-520_SHP099_60min_R1 1 GTGQSDDSDIWDDTALIK 18 0 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 GT(0.5)GQS(0.5)DDSDIWDDTALIK 89.846 0.0065658 791980000.0 162500.0 145820.0 143630.0 131600.0 148930.0 151620.0 152620.0 135990.0 179140.0 146380.0 True False 153485.80106428103 138814.5883197176 152888.6196161256 144107.2244330171 160649.94370421424 150673.68333941652 168048.31902766105 135518.28243030445 146612.69175190688 145083.18708191672 1.0579158354001421 0.9567930723863974 1.0537997040952911 0.9932730823706777 1.1072953864289474 1.0385330400437323 1.1582894090462583 0.9340729629394497 1.0105422599320661 1.0 17.146520817280948 -3.8503443512517466 20.27888383025819 1.0311108596730059 30.104634309281746 0.017511330714725992 0.06349053090827098 6545.1038038915185 882831.405615319 0.015225687776610191 40592.35809453451 0.0001411417990250221 3.8503443512517466 29.07352344960874 GT(ph)PGKGAT(ph)PAPPGK ddPTM_KYSE-520_SHP099_60min_R1 2 GTPGKGATPAPPGK 14 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 2 GT(1)PGKGAT(1)PAPPGK;GT(1)PGKGAT(1)PAPPGK 74.953 0.021580000000000002 259080000.0 756530.0 766170.0 738670.0 724700.0 707350.0 708780.0 714130.0 772830.0 884970.0 706040.0 True False 714563.7727948347 729362.0431553832 786285.8501137883 793575.2701109991 763014.4207290405 704356.241111409 786321.229637162 770149.2331098786 724281.7562782462 699785.0348908078 1.0211189682076196 1.0422658484961607 1.1236105531128966 1.1340272091340535 1.0903554415794257 1.0065323006247404 1.1236611108150618 1.1005511617293304 1.0350060663861735 1.0 19.416552286885864 -9.434305462808732 9.194294008036227 0.9999949255382581 1.0780114589925862 0.20544672137204245 0.04408467142104967 0.0 0.0 0.04445074194176853 0.010780888480175575 3.6787013965261087e-10 9.434305462808732 0.07801653345432813 GT(ph)PGKGATPAPPGK ddPTM_KYSE-520_SHP099_60min_R1 2 GTPGKGATPAPPGK 14 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 GT(1)PGKGATPAPPGK;GT(1)PGKGATPAPPGK 168.47 8.8641e-08 2468300000.0 2380410.0 2280920.0 1823250.0 1359780.0 1545030.0 1889110.0 1548650.0 1567030.0 2127410.0 1780460.0 True False 2248363.9120703097 2171341.1794692776 1940779.6123031457 1489013.0823672374 1666615.0709818164 1877319.363760227 1705202.655367497 1561594.3386775495 1741125.9716418672 1764686.5095769188 1.2740868703129329 1.2304401760230228 1.099787186999262 0.8437833429826731 0.9444255747052688 1.063825984712895 0.9662921125726274 0.8849131730779422 0.9866488819361462 1.0 20.75098048582428 -4.93412377085337 3.13277994796787 0.9554240814194509 1.2551332959668415 0.8024939327521257 0.05890046498946778 0.10381568731654024 2.0542307302462044 0.01678040858407488 0.03953032294466522 1.1637943090031191e-05 4.93412377085337 0.29970921454739063 GT(ph)PGPDSSGSLGSGEFTGVK ddPTM_KYSE-520_SHP099_60min_R1 3 GTPGPDSSGSLGSGEFTGVK 20 0 Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;M0R2S2 Q9UBC2-3 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 GT(0.904)PGPDS(0.087)S(0.009)GSLGSGEFTGVK;GT(0.758)PGPDS(0.222)S(0.018)GS(0.003)LGSGEFTGVK;GT(0.731)PGPDS(0.239)S(0.029)GSLGSGEFTGVK 348.63 1.1632999999999998e-64 1711610000.0 1188610.0 1174340.0 974650.0 862880.0 936030.0 1187370.0 961160.0 1086830.0 1349770.0 1199290.0 True False 1122675.4338647095 1117922.943679723 1037477.4984951369 944887.8557656679 1009690.2357178262 1179959.1833974633 1058323.432817631 1083060.0403980282 1104685.7929327413 1188665.2236335014 0.9444841251710259 0.9404859513450439 0.8728088261249747 0.7949150332482539 0.8494319642257337 0.9926757845161603 0.8903460888529717 0.9111564962650626 0.9293498042753766 1.0 20.180911020142997 -6.242946281387432 24.909666273268915 0.9357554509934947 0.8785881964702945 0.2749948134489938 0.05112116183401602 1327.0051834678861 1787439.2656155312 0.018361275862649344 0.01832942340766271 5.715493281944156e-07 6.242946281387432 -0.05716725452320015 GT(ph)PGPPPAHGAALQPHPR ddPTM_KYSE-520_SHP099_60min_R1 5 GTPGPPPAHGAALQPHPR 18 0 Q15654 Q15654 TRIP6 Thyroid receptor-interacting protein 6 1 GT(1)PGPPPAHGAALQPHPR;GT(1)PGPPPAHGAALQPHPR;GT(1)PGPPPAHGAALQPHPR;GT(1)PGPPPAHGAALQPHPR;GT(1)PGPPPAHGAALQPHPR 192.98 1.9398e-12 2686580000.0 843183.0 845840.0 923546.0 859247.0 730501.0 752363.0 712789.0 790405.0 950270.0 761418.0 True False 796409.9581463624 805204.5767682765 983079.2528858463 940909.57653797 787987.2727178683 747667.2234421148 784844.6682702635 787663.2695369141 777724.9223572873 754672.4288942397 1.0553054910370547 1.0669590486405836 1.3026569081452632 1.2467787884030803 1.0441447740080319 0.9907175548172747 1.0399805772952813 1.0437154444492072 1.0305463570423852 1.0 19.52549104237185 -5.87530520308323 7.045038332980899 1.0242895835476966 1.1698515899392028 0.4984842885025228 0.07051565893117905 0.20922651132824782 12.127155658693486 0.024227048062078427 0.027560993214846053 1.332584621096074e-06 5.87530520308323 0.14556200639150618 GT(ph)PKPSEGTPAPR ddPTM_KYSE-520_SHP099_60min_R1 1 GTPKPSEGTPAPR 13 1 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 GT(0.993)PKPS(0.007)EGTPAPR 75.911 0.042225 726390000.0 527270.0 468820.0 489540.0 398970.0 434680.0 418670.0 354870.0 405540.0 505090.0 403860.0 True False 498021.282013314 446297.1834868334 521096.53169169417 436887.9888452951 468886.8430091171 416056.9252322491 390743.72279744485 404133.2763937479 413378.3882827429 400282.11459832557 1.244175704710333 1.1149565948872908 1.301823170926843 1.091450187035468 1.1713909413105676 1.03940923178582 0.9761708268917978 1.009621118843361 1.0327176089232943 1.0 18.610657629116147 -6.158868267278257 1.4264906134269175 1.0015902734405797 1.1992218032309858 0.7023049111208496 0.05685381427622675 0.22227336323236893 0.913929310476035 0.02381514350427662 0.023401761080031905 6.936361718579326e-07 6.158868267278257 0.1976315297904061 GT(ph)PPPVFT(ph)PPLPK ddPTM_KYSE-520_SHP099_60min_R1 6 GTPPPVFTPPLPK 13 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 2 GT(1)PPPVFT(1)PPLPK;GT(1)PPPVFT(1)PPLPK;GT(1)PPPVFT(1)PPLPK;GT(1)PPPVFT(1)PPLPK;GT(1)PPPVFT(1)PPLPK;GT(1)PPPVFT(1)PPLPK 128.71 0.00010923 2391460000.0 2175120.0 2066140.0 2027060.0 1792620.0 1949680.0 1844160.0 1782230.0 1927460.0 2362330.0 1943680.0 True False 2054461.757605777 1966879.5330606336 2157727.531010674 1962990.065829144 2103108.7238382613 1832649.9133835828 1962395.2012886144 1920774.0911325442 1933390.4214931442 1926460.5073601564 1.0664437447622643 1.0209809780922339 1.1200476328307527 1.0189620074376944 1.0916957372358322 0.9513041696841619 1.0186532211748787 0.9970482570465956 1.003597226159847 1.0 20.877521180227085 -6.253795176797184 24.986997908504005 0.9954693807682349 1.0619100510257677 0.5371933897278821 0.03222512037004221 461.17129897591616 1507456.372794866 0.010090326057213356 0.009911317026069585 5.574485924414033e-07 6.253795176797184 0.06644067025753286 GT(ph)PSQS(ph)PVVGR ddPTM_KYSE-520_SHP099_60min_R1 2 GTPSQSPVVGR 11 0 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 GT(0.999)PS(0.266)QS(0.734)PVVGR;GT(0.999)PS(0.095)QS(0.906)PVVGR 154.1 0.00012159 1491280000.0 2189300.0 2151500.0 2140900.0 1916250.0 1941490.0 1989950.0 1707700.0 1675110.0 2089080.0 1654150.0 True False 2067855.1647386504 2048138.710532661 2278905.839561116 2098369.8238584283 2094274.2174329888 1977529.9839155274 1880330.9815459114 1669299.4343836128 1709755.7334211955 1639495.517909227 1.2612752777608631 1.2492493502785282 1.3900043120991874 1.2798875025497982 1.2773894131188113 1.2061820006909079 1.1468960793157952 1.018178711773725 1.0428547774266368 1.0 20.644820526987463 -6.869237051800708 1.1991398668707305 1.0070872954393495 1.2984455652771736 0.9047890777341787 0.0382448788257099 0.13849265969350363 0.38913275870849023 0.02793937936124558 0.014481242008680385 1.3513347601771488e-07 6.869237051800708 0.2913582698378241 GT(ph)S(ph)Y(ph)IEEDIQES(ph)ICK ddPTM_KYSE-520_SHP099_60min_R1 2 GTSYIEEDIQESICK 15 0 H0YF13 H0YF13 CEP126 4 GT(1)S(1)Y(1)IEEDIQES(1)ICK;GT(1)S(1)Y(1)IEEDIQES(1)ICK 64.331 0.017556 418690000.0 23064.1 21478.0 34002.0 25268.0 25264.0 21953.3 26914.0 22103.8 27596.0 22553.6 True False 21784.688395856523 20446.16464086474 36193.82332512353 27669.463122898793 27252.13306750333 21816.281311536844 29634.7297753274 22027.127076865716 22585.262038548728 22353.79265043528 0.974541042610607 0.9146619976573239 1.6191356827504058 1.2377972523763212 1.2191279347387465 0.9759543560547446 1.3257137273638593 0.9853865704724964 1.010354815029965 1.0 14.448232006205314 -7.292661456881863 24.086283773932795 0.9984029086698655 1.1833643643476328 0.15750534868834387 0.1932728254878983 897.4343904068912 692319.932196982 0.10996853360268824 0.052837807185032226 5.097280616566069e-08 7.292661456881863 0.18496145567776734 GT(ph)SKTDS(ph)KTHYK ddPTM_KYSE-520_SHP099_60min_R1 1 GTSKTDSKTHYK 12 2 O75494;O75494-2 O75494 SRSF10 Serine/arginine-rich splicing factor 10 2 GT(0.943)S(0.054)KT(0.003)DS(0.827)KT(0.172)HY(0.001)K 76.391 0.04188 1310300000.0 1104400.0 1110200.0 1053400.0 1127800.0 1003200.0 991290.0 887800.0 1153900.0 1459300.0 1066700.0 True False 1043136.7304331816 1056864.325555827 1121303.8494995923 1234985.772914565 1082146.132572804 985102.9914096444 977547.4880930257 1149897.3902222847 1194327.9059593484 1057249.8678800412 0.986651086109702 0.9996353347151631 1.0605854713871847 1.1681115414948344 1.0235481369628203 0.931759862391789 0.9246134880614062 1.087630677625921 1.1296552898646097 1.0 20.01188494940352 -10.734268740361056 2.722707851151775 0.9937283653037587 1.0333075635406803 0.018455603778066654 0.075287656655542 64766973.48205708 39489567.56593345 2704574.084672131 0.020626446048880205 1.843874081324703e-11 10.734268740361056 0.039579198236921576 GT(ph)SPRPPEGGLGYSQLGDDDLK ddPTM_KYSE-520_SHP099_60min_R1 2 GTSPRPPEGGLGYSQLGDDDLK 22 1 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;P21127-5;P21127-4;P21127-12;Q9UQ88-8;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 GT(0.552)S(0.448)PRPPEGGLGYSQLGDDDLK;GT(0.5)S(0.5)PRPPEGGLGYSQLGDDDLK 145.19 2.2527e-06 4043890000.0 1376750.0 1344520.0 1129090.0 1149930.0 1156910.0 1339680.0 1123090.0 1510870.0 1464330.0 1389090.0 True False 1300378.9330169174 1279927.2410343355 1201872.9480078737 1259219.001460939 1247952.2350825388 1331318.5601909352 1236622.8975021346 1505629.1446097076 1198444.5847553276 1376783.7432956665 0.9445048573163308 0.9296501700190899 0.8729569577360775 0.914609144386534 0.9064257485313284 0.9669772516372838 0.8981969053048063 1.0935843424513558 0.87046683300208 1.0 20.392870536947708 GT(ph)SPSSSSRPQR ddPTM_KYSE-520_SHP099_60min_R1 1 GTSPSSSSRPQR 12 1 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 GT(0.488)S(0.488)PS(0.022)S(0.003)SSRPQR 79.20100000000001 0.039807 4407400000.0 2493500.0 2226700.0 2140700.0 2030100.0 2067300.0 2021600.0 2100800.0 1985500.0 2433300.0 2063000.0 True False 2355180.584330983 2119725.9896551576 2278692.947241103 2223040.0936281774 2229984.7486720104 2008982.444525555 2313169.3658321975 1978612.7639191842 1991474.0585012531 2044723.4249897124 1.151833326476823 1.0366810316489734 1.114425999815876 1.0872082094131446 1.0906045880915314 0.9825203839172835 1.1312871645923632 0.9676676756071003 0.9739576678989105 1.0 20.963474282720835 -6.933983225599622 0.7421477489629745 0.9765411818377072 1.0966103679442663 0.4309366514006173 0.049937751636394884 0.6593982748868528 0.6952682589201521 0.04238905124687069 0.02372089655218271 1.1641709940463463e-07 6.933983225599622 0.12006918610655903 GTAGKS(ph)PDLSSQK ddPTM_KYSE-520_SHP099_60min_R1 2 GTAGKSPDLSSQK 13 1 Q9Y2I7 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 GT(0.366)AGKS(0.634)PDLSSQK;GT(0.063)AGKS(0.915)PDLS(0.021)SQK 108.71 0.00042533 515940000.0 639200.0 500110.0 455380.0 473300.0 510690.0 529430.0 479260.0 553600.0 593510.0 497250.0 True False 603742.3017863908 476083.96491958585 484734.52343376196 518282.28969716624 550878.3975713771 526125.6309879128 527708.2779268565 551679.6908112112 485743.5451695558 492844.751854646 1.2250151787442625 0.9659917512117419 0.9835440503518317 1.0516136932508566 1.1177523865240364 1.067528119165368 1.070739367602098 1.1193782397705583 0.9855913923028148 1.0 18.910773737668094 -7.784106160538495 24.93542485561945 0.992795570886245 1.0687285938784576 0.1811071659970236 0.06899833028690013 490.00650700436825 539033.9000753261 0.06598815640105528 0.01709023795474612 1.6439698160742997e-08 7.784106160538495 0.0759330229922126 GTAQYSS(ph)QK ddPTM_KYSE-520_SHP099_60min_R1 6 GTAQYSSQK 9 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 GTAQYS(0.077)S(0.923)QK;GTAQYS(0.016)S(0.984)QK;GTAQYS(0.033)S(0.967)QK;GTAQYS(0.025)S(0.975)QK;GTAQYS(0.034)S(0.966)QK;GTAQYS(0.013)S(0.987)QK 196.11 3.2771e-06 4960920000.0 9657240.0 8776100.0 8468570.0 11073300.0 11268200.0 10029100.0 13164800.0 9636000.0 12576000.0 11002500.0 True False 9121533.645969346 8354482.982805341 9014467.572391074 12125703.102690957 12154943.23271221 9966504.666794246 14495626.460066525 9602574.965059314 10292515.415161205 10905026.409815475 0.8364522288326757 0.7661130444659516 0.8266341807551485 1.1119370689260106 1.1146184131907924 0.9139367748640684 1.3292610137119152 0.8805641182506591 0.9438322318868521 1.0 23.37848992811626 -5.205906399129284 6.723929474721867 1.04657132531161 0.8030928682062694 0.4306519492575799 0.12231181694275396 0.22663488596406886 22.559497314481852 0.033140158108226715 0.057580988432634615 6.22434420251047e-06 5.205906399129284 -0.24347845710534066 GTAQYSS(ph)QKS(ph)VEER ddPTM_KYSE-520_SHP099_60min_R1 2 GTAQYSSQKSVEER 14 1 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 2 GTAQY(0.001)S(0.011)S(0.988)QKS(1)VEER;GTAQY(0.002)S(0.125)S(0.873)QKS(1)VEER 123.0 5.5456000000000006e-05 428170000.0 1107920.0 1158930.0 1038590.0 1216600.0 1131630.0 1035980.0 1052730.0 1158950.0 1419600.0 1021340.0 True False 1046461.469016236 1103253.2632106063 1105539.1732027559 1332225.2982158726 1220682.8429060641 1029514.0645427302 1159150.222054709 1154929.8729509637 1161836.4252037883 1012291.7221904955 1.0337548416891138 1.0898570432081371 1.0921151966060558 1.316048792074555 1.2058607377176134 1.0170132205714055 1.1450752748885733 1.1409061712485546 1.1477288608956453 1.0 19.949193675076874 -9.465408592659784 14.07468890681599 0.9999572622618281 1.1344693192062887 0.19126929605427934 0.08131484747308264 0.0 0.0 0.08353383399461031 0.020259930639564095 3.424454556256655e-10 9.465408592659784 0.13451205694446056 GTDDS(ph)PKDSQEDLQER ddPTM_KYSE-520_SHP099_60min_R1 1 GTDDSPKDSQEDLQER 16 1 Q969E4;Q6IPX3-2;Q6IPX3;Q5H9L2 Q969E4 TCEAL3;TCEAL6;TCEAL5 Transcription elongation factor A protein-like 3;Transcription elongation factor A protein-like 6;Transcription elongation factor A protein-like 5 1 GT(0.039)DDS(0.961)PKDSQEDLQER 75.91 0.0085538 843310000.0 2133300.0 1816200.0 1772500.0 1735800.0 1819600.0 2075400.0 1916200.0 1881700.0 2315200.0 1937000.0 True False 2014961.5963718821 1728947.0258282225 1886758.186100275 1900769.9101126993 1962792.1678922216 2062446.658769461 2109908.1963098184 1875172.8218920834 1894818.0414425286 1919839.6869631975 1.0495467981283106 0.9005684368172797 0.982768612875562 0.9900669951871539 1.0223729518775426 1.074280666648703 1.099002281616165 0.9767340651542795 0.9869668047334472 1.0 20.872554415437605 -5.654890678574572 2.7099666533065725 1.0319244686210844 0.9713144083012356 0.1725696177072057 0.048638047903419385 0.42443696713620993 6.310930420375485 0.01598569738360968 0.02147385075229349 2.2136518640976442e-06 5.654890678574572 -0.060610060319848835 GTDTQTPAVLS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 10 GTDTQTPAVLSPSK 14 0 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQTPAVLS(0.999)PS(0.001)K;GTDTQTPAVLS(1)PSK;GTDTQTPAVLS(1)PSK;GTDTQTPAVLS(1)PSK;GTDTQTPAVLS(0.999)PS(0.001)K;GTDTQTPAVLS(0.996)PS(0.004)K;GTDTQTPAVLS(0.995)PS(0.005)K;GTDTQTPAVLS(0.998)PS(0.002)K;GTDTQTPAVLS(0.996)PS(0.004)K;GTDTQTPAVLS(0.995)PS(0.005)K 346.18 2.9329e-54 54985240000.0 18423250.0 20951200.0 14465720.0 12280750.0 12653500.0 20970250.0 15097800.0 20638350.0 19343640.0 22559180.0 True False 17401275.596661624 19944672.90360768 15398203.457170341 13447908.78765787 13649258.461433409 20839366.89123075 16624032.964328533 20566760.380877078 15831322.589482265 22359323.215976443 0.7782559171660376 0.8920070035642484 0.6886703729103857 0.601445252065989 0.6104504295407556 0.932021362629633 0.743494461068935 0.9198292892059218 0.7080412245291166 1.0 24.4143731847839 -6.267362396756506 24.94780835036029 0.8483426693451972 0.7163671974628588 0.2961729020306224 0.11209912953732729 728.9080386399776 3070158.6496174457 0.04039151433687803 0.03654704984894251 5.403032790546804e-07 6.267362396756506 -0.13197547188233838 GTDTQTPAVLS(ph)PSKTQATLKPK ddPTM_KYSE-520_SHP099_60min_R1 2 GTDTQTPAVLSPSKTQATLKPK 22 2 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQTPAVLS(0.973)PS(0.027)KTQATLKPK;GTDTQTPAVLS(0.995)PS(0.005)KTQATLKPK 233.54 6.697199999999999e-27 15373300000.0 3715500.0 4007500.0 3130300.0 2156290.0 1993880.0 3569300.0 2069950.0 2955000.0 3661000.0 3454200.0 True False 3509393.808334379 3814973.6846198654 3332084.146657089 2361223.1532877735 2150787.0123746623 3547022.67473539 2279200.746765214 2944749.7947021853 2996254.6862997087 3423598.475326933 1.0250599869189547 1.1143169130707007 0.9732695497648552 0.6896904442225197 0.6282240828984115 1.0360510148307245 0.6657324926362937 0.8601329320375338 0.8751770126938102 1.0 21.70708207958468 -5.042622061344882 5.583527842054796 0.8110875871061262 1.0652411499321026 0.3815096073345122 0.1289566635283961 0.17981166164190357 14.342869150445763 0.03434538890231862 0.06301974853304353 9.065211449953178e-06 5.042622061344882 0.25415356282597645 GTDTQTPAVLSPS(ph)KTQATLKPK ddPTM_KYSE-520_SHP099_60min_R1 1 GTDTQTPAVLSPSKTQATLKPK 22 2 P46087-2;P46087;P46087-4 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 GTDTQT(0.001)PAVLS(0.073)PS(0.905)KT(0.012)QAT(0.009)LKPK 76.118 0.0047333 318810000.0 1262300.0 1436300.0 1058900.0 704880.0 799680.0 1208600.0 748660.0 910060.0 1483200.0 1222400.0 True False 1192277.7026673343 1367297.992069748 1127158.3882999052 771871.5832701008 862610.266443202 1201056.6790925935 824341.8590174858 906903.2142696 1213888.2684293184 1211570.487012809 0.9840762179730526 1.1285335906793945 0.9303283633781587 0.637083513954843 0.7119769552739876 0.9913221657073062 0.680391168201814 0.7485352474255277 1.001913038854408 1.0 20.208446909982737 -5.000303125335439 9.278626026418085 0.8081641826892785 1.050061004021174 0.3229435260284945 0.13296758228706396 0.09937532274322054 141.8182167663801 0.03464976349825699 0.06799075804152342 9.993022716470205e-06 5.000303125335439 0.2418968213318955 GTEAPAVVT(ph)EEEDDDEETAPPVIAPRPDHTK ddPTM_KYSE-520_SHP099_60min_R1 10 GTEAPAVVTEEEDDDEETAPPVIAPRPDHTK 31 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GT(0.002)EAPAVVT(0.998)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GT(0.002)EAPAVVT(0.998)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK;GTEAPAVVT(1)EEEDDDEETAPPVIAPRPDHTK 194.26 4.3536e-15 31365650000.0 10889020.0 11554790.0 9568120.0 8996770.0 8483480.0 9951340.0 9238700.0 9608940.0 12912190.0 10740820.0 True False 10284984.353876796 10999680.544306627 10184896.324733287 9851820.315822456 9151081.61160162 9889229.995797867 10172637.957023008 9575608.829883467 10567661.78582144 10645664.691031499 0.9661195099016635 1.0332544621261057 0.9567177457048418 0.9254302668505217 0.8596064104208544 0.9289443433371619 0.9555662565244052 0.8994843542226625 0.9926728008561294 1.0 23.34376269540306 -4.966152791389119 5.756542590902044 0.9310260583070268 0.9995504917161423 0.24723501992639252 0.04190381216615437 0.20824744511141222 18.974101913729335 0.010847196639892434 0.022648728340300368 1.081053553342005e-05 4.966152791389119 0.06852443340911551 GTENTFPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 GTENTFPSPK 10 0 J3QSD2;J3QRZ1;A6NIZ0;Q9GZM8-3;Q9GZM8;Q9GZM8-2 J3QSD2 NDEL1 Nuclear distribution protein nudE-like 1 1 GTENTFPS(1)PK;GTENT(0.005)FPS(0.995)PK;GTENT(0.001)FPS(0.999)PK 172.92 3.7026e-05 1777020000.0 3600330.0 3438770.0 2797930.0 2355280.0 2925900.0 3332920.0 2774680.0 3127170.0 3765200.0 3237400.0 True False 3400612.517820084 3273566.3275009994 2978289.044646283 2579125.103059247 3156151.6839062716 3312118.009996103 3055171.73266722 3116322.577156963 3081534.5929679563 3208719.1546590896 1.0598037266310338 1.0202096754861674 0.9281862640804136 0.8037864888593736 0.9836173039087919 1.0322243394804052 0.9521468179074141 0.9712045295806067 0.9603628253016596 1.0 21.613566091598415 GTEPS(ph)PGGTPQPSRPVS(ph)PAGPPEGVPEEAQPPR ddPTM_KYSE-520_SHP099_60min_R1 4 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 1 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 2 GT(0.115)EPS(0.885)PGGTPQPS(0.009)RPVS(0.991)PAGPPEGVPEEAQPPR;GTEPS(0.999)PGGTPQPSRPVS(1)PAGPPEGVPEEAQPPR;GT(0.001)EPS(0.994)PGGT(0.005)PQPS(0.002)RPVS(0.998)PAGPPEGVPEEAQPPR;GTEPS(0.999)PGGT(0.001)PQPS(0.019)RPVS(0.981)PAGPPEGVPEEAQPPR 237.1 3.4110999999999997e-31 3214720000.0 1164040.0 1269690.0 1128980.0 1067520.0 1175290.0 1145990.0 1157270.0 1145090.0 1429080.0 1083700.0 True False 1099468.3807437888 1208692.1865564547 1201755.8572318694 1168976.7798384074 1267778.636514645 1138837.4513265926 1274258.1454667877 1141117.9500560157 1169595.0961751405 1074099.261105843 1.023618971315395 1.1253077162645482 1.1188499059152104 1.088332170189637 1.1803179486497355 1.0602720740670637 1.1863504534533154 1.0623952472336435 1.0889078305211564 1.0 20.034695893083246 -8.217148392181471 1.3751060598230682 1.0007931260912806 1.111182285434516 0.30206463963481545 0.04839548126114014 0.9153291167498481 3.2552711540533545 0.043361940309253624 0.012908966682091091 6.065290519204528e-09 8.217148392181471 0.11038915934323534 GTEPSPGGTPQPSRPVS(ph)PAGPPEGVPEEAQPPR ddPTM_KYSE-520_SHP099_60min_R1 2 GTEPSPGGTPQPSRPVSPAGPPEGVPEEAQPPR 33 1 I3L1Q2;Q8WUZ0;Q8WUZ0-2 I3L1Q2 BCL7C B-cell CLL/lymphoma 7 protein family member C 1 GTEPS(0.001)PGGT(0.001)PQPS(0.005)RPVS(0.994)PAGPPEGVPEEAQPPR;GTEPSPGGTPQPS(0.004)RPVS(0.996)PAGPPEGVPEEAQPPR 318.23 1.4595999999999997e-67 1019100000.0 382577.0 546254.0 415300.0 324215.0 307202.0 540155.0 385045.0 458142.0 506133.0 502951.0 True False 361354.6911616581 520011.13789603015 442070.9025034943 355028.29612120596 331377.0496597194 536783.6922846768 423969.10627706593 456552.81233314716 414232.00577463297 498495.24542995635 0.7248909482576642 1.0431616804038244 0.8868106698233489 0.7121999645452808 0.6647546846187147 1.0768080482326292 0.8504977934371049 0.9158619194840394 0.83096480773323 1.0 18.927220218925207 -6.261930434296442 24.999999881776606 0.9242973308786221 0.8187570148615338 0.2193911722325731 0.11920135680815823 92.70378722041313 4719532.072624019 0.042797139631419956 0.040070702815932176 5.471035914496906e-07 6.261930434296442 -0.10554031601708824 GTFHDDRDDGVDYWAK ddPTM_KYSE-520_SHP099_60min_R1 6 GTFHDDRDDGVDYWAK 16 1 Q9NYF8-3;E9PK91;H0YF63 Q9NYF8-3 BCLAF1 Bcl-2-associated transcription factor 1 0 ;;;;; 128.74 6.8384e-05 11415860000.0 12632700.0 13556270.0 9050480.0 8477530.0 11474580.0 13188970.0 10573710.0 10826710.0 10540260.0 11520150.0 False True 11931938.948336892 12905006.440823898 9633888.422080005 9283231.902337655 12377564.164570639 13106652.746029973 11642603.796265041 10789154.6699831 8626414.482331993 11418090.433541087 1.0450030167291682 1.1302245779132154 0.8437390190727585 0.8130284092923102 1.084031015222218 1.147884825603471 1.0196629518771754 0.944917605337013 0.7555041302695907 1.0 23.444818058133407 -7.526110481717549 24.869668521898646 0.8685716284347031 1.008364644161149 0.17486743284894302 0.11697292993559762 170.6482515637206 1313136.1774045248 0.0832884515821242 0.031835382524683244 2.9777588104142563e-08 7.526110481717549 0.13979301572644576 GTFS(ph)DQELDAQS(ph)LDDEDDNMHHAVYPAVNR ddPTM_KYSE-520_SHP099_60min_R1 2 GTFSDQELDAQSLDDEDDNMHHAVYPAVNR 30 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 2 GT(0.013)FS(0.987)DQELDAQS(1)LDDEDDNMHHAVYPAVNR;GT(0.118)FS(0.882)DQELDAQS(1)LDDEDDNMHHAVYPAVNR 262.78 2.3368e-41 848340000.0 147436.0 102762.0 142570.0 140101.0 117562.0 164844.0 122619.0 108497.0 177642.0 132464.0 True False 139257.43117362066 97825.15927109342 151760.29032006543 153416.1569170983 126813.46056372006 163815.147450223 135014.52516611692 108120.64923039022 145386.69079039976 131290.4720154325 1.0606819294339325 0.7451047876466969 1.1559124435338066 1.1685246809004164 0.9658999515883667 1.2477306611478054 1.0283649917127777 0.8235224351823582 1.1073666547052274 1.0 17.002402695504944 -4.776163832823996 24.99859237596674 1.0616431380350648 0.9028932524566654 0.1860150013340941 0.13326652852941046 345.0369106441653 585791.6117613056 0.03499758427338326 0.07334011027760892 1.6743111413851864e-05 4.776163832823996 -0.15874988557839942 GTFS(ph)DQELDAQSLDDEDDNMHHAVYPAVNR ddPTM_KYSE-520_SHP099_60min_R1 3 GTFSDQELDAQSLDDEDDNMHHAVYPAVNR 30 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 GT(0.051)FS(0.949)DQELDAQSLDDEDDNMHHAVYPAVNR;GT(0.3)FS(0.7)DQELDAQSLDDEDDNMHHAVYPAVNR;GT(0.088)FS(0.912)DQELDAQSLDDEDDNMHHAVYPAVNR 289.93 1.4341e-52 2568890000.0 320342.0 302951.0 290410.0 290671.0 269950.0 270038.0 328488.0 296669.0 347036.0 254904.0 True False 302571.9906740547 288396.77922127815 309130.29327242903 318296.28444657713 291193.5291946062 268352.59267648996 361694.7727739372 295639.92448206537 284023.0104656397 252645.7488723108 1.1976136231248327 1.1415065581294868 1.223572114916788 1.2598521283943973 1.1525764058740515 1.0621694363522323 1.431628176560931 1.1701757334198573 1.1241946944818264 1.0 17.946756379180194 -8.028688932798177 2.5158308113624583 1.0016972809718432 1.2063012928289403 0.3286907624623352 0.09105152193427624 0.3550225891816605 5.301153359992459 0.08759245254457805 0.02381973399847703 9.360759066026676e-09 8.028688932798177 0.2046040118570971 GTFSDQELDAQS(ph)LDDEDDNMHHAVYPAVNR ddPTM_KYSE-520_SHP099_60min_R1 1 GTFSDQELDAQSLDDEDDNMHHAVYPAVNR 30 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 GT(0.039)FS(0.203)DQELDAQS(0.757)LDDEDDNMHHAVYPAVNR 187.49 1.9004000000000003e-15 512270000.0 61053.0 48571.0 55663.0 61249.0 40571.0 48558.0 47088.0 58447.0 65246.0 47050.0 True False 57666.26838386186 46237.57625344265 59251.12604394893 67070.08654481679 43763.706882586965 48254.93151032449 51848.1145745938 58244.260998632315 53398.971117812354 46633.1736043461 1.2365932645529298 0.9915168254629236 1.2705788918991108 1.43824838330467 0.9384672648251479 1.03477691481472 1.1118289956950662 1.2489877161867466 1.145085504385138 1.0 15.509068994675525 -5.781125390745288 24.999986242380213 1.091651715461533 1.2194935951724049 0.250715196345661 0.12878139934694322 450.83854846258464 572533.7825663202 0.043012649445204526 0.04883600225543416 1.6552919738352715e-06 5.781125390745288 0.1278418797108718 GTGQS(ph)DDS(ph)DIWDDTALIK ddPTM_KYSE-520_SHP099_60min_R1 10 GTGQSDDSDIWDDTALIK 18 0 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 2 GT(0.002)GQS(0.998)DDS(1)DIWDDTALIK;GT(0.028)GQS(0.847)DDS(0.997)DIWDDT(0.127)ALIK;GT(0.099)GQS(0.901)DDS(1)DIWDDTALIK;GTGQS(1)DDS(1)DIWDDTALIK;GTGQS(1)DDS(1)DIWDDTALIK;GT(0.009)GQS(0.991)DDS(1)DIWDDTALIK;GT(0.176)GQS(0.83)DDS(0.994)DIWDDTALIK;GT(0.048)GQS(0.952)DDS(1)DIWDDTALIK;GT(0.102)GQS(0.898)DDS(0.999)DIWDDTALIK;GTGQS(1)DDS(1)DIWDDTALIK 407.95 1.3716999999999998e-101 13872930000.0 8060926.0 7209141.0 6944669.0 7187813.0 7247545.0 6967255.0 7453740.0 7473689.0 8660631.0 7162311.0 True False 7613770.3657224 6862803.045218746 7392333.475603279 7870940.5864252215 7817885.558609814 6923769.777172983 8207236.780692157 7447764.517231124 7088078.727140825 7098858.496733647 1.0725344601847855 0.9667474071185508 1.0413411506941104 1.1087614424272336 1.101287701706832 0.9753356515500025 1.1561347200354115 1.0491495950592644 0.9984814784520946 1.0 22.759155625842727 -4.99584658437104 24.88936369413314 1.061517772120193 1.0157417655369865 0.049853356210281086 0.058077686037104136 269.91528554885105 1617410.1893251566 0.01478198577608966 0.03055203196313954 1.0096094702008877e-05 4.99584658437104 -0.04577600658320646 GTGQS(ph)DDSDIWDDTALIK ddPTM_KYSE-520_SHP099_60min_R1 9 GTGQSDDSDIWDDTALIK 18 0 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 GT(0.001)GQS(0.955)DDS(0.044)DIWDDTALIK;GT(0.173)GQS(0.827)DDSDIWDDTALIK;GTGQS(1)DDSDIWDDTALIK;GT(0.029)GQS(0.971)DDSDIWDDTALIK;GT(0.009)GQS(0.991)DDSDIWDDTALIK;GT(0.019)GQS(0.98)DDSDIWDDTALIK;GTGQS(1)DDSDIWDDTALIK;GT(0.003)GQS(0.997)DDSDIWDDTALIK;GTGQS(0.998)DDS(0.001)DIWDDTALIK 381.64 1.7842999999999996e-86 13499360000.0 12292410.0 11762170.0 11145260.0 10160030.0 11555950.0 11797390.0 11994310.0 11368960.0 13428760.0 11154330.0 True False 11610525.512988187 11197097.697822886 11863701.29264651 11125636.196475605 12465337.520638658 11723758.112990368 13206811.907984974 11329523.73129521 10990435.69549143 11055511.314137436 1.0502024902404121 1.0128068598242392 1.073102903659968 1.0063429795642735 1.12752247873858 1.060444675950754 1.1945907821645954 1.024785141941592 0.994113739582285 1.0 23.398262415128826 -5.736678363882839 24.999420819322907 1.0742096026536587 1.0366625526602795 0.054895390783134324 0.05906620445658387 640.333929114558 646496.6697858245 0.017660728830152458 0.022789703992592263 1.8336719270255705e-06 5.736678363882839 -0.03754704999337921 GTGQSDDS(ph)DIWDDTALIK ddPTM_KYSE-520_SHP099_60min_R1 1 GTGQSDDSDIWDDTALIK 18 0 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 GTGQS(0.001)DDS(0.539)DIWDDT(0.46)ALIK 86.803 0.0046619 584670000.0 938950.0 943950.0 891800.0 840620.0 947340.0 952610.0 1003400.0 956490.0 1135400.0 938530.0 True False 886864.571749581 898601.225102164 949286.8549304517 920512.272058382 1021890.2683727276 946664.4076372616 1104833.4642403037 953172.1594364434 929239.9811048057 930215.3543652904 0.9533970468104253 0.9660141825064825 1.020502242277192 0.9895689936084435 1.0985523551909002 1.0176830592988813 1.1877179397819764 1.0246790218667343 0.9989514543531157 1.0 19.82720522797794 -5.110859996721702 1.190946073468692 1.0591002303200618 0.9528051963510832 0.274921697310873 0.05591619422883306 0.7049661763389915 1.810728184708701 0.019429600782816477 0.06430295494493603 7.74711500881451e-06 5.110859996721702 -0.10629503396897866 GTGS(ph)ADSIATLPK ddPTM_KYSE-520_SHP099_60min_R1 1 GTGSADSIATLPK 13 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 GT(0.067)GS(0.929)ADS(0.004)IAT(0.001)LPK 62.081 0.033985 168490000.0 347100.0 362420.0 327690.0 291530.0 333610.0 365800.0 301340.0 315030.0 387020.0 348320.0 True False 327845.67107330484 345008.7991964895 348813.42172253836 319236.92354830937 359863.20901875297 363516.90651338 331802.3879949901 313937.23445855436 316746.92398025555 345234.1557888593 0.9496327798858087 0.9993472355252485 1.0103676472146867 0.9246968128598217 1.0423742928809183 1.0529575374219409 0.9610937458862445 0.9093458141220369 0.9174843180174034 1.0 18.397215679247832 -6.994329627198804 24.806443112892545 0.935092987609804 0.9970402622779817 0.2499629627589206 0.04246387147974957 167.4908965511226 732726.9614404056 0.018088699040511837 0.012153821832985563 1.0131421243643554e-07 6.994329627198804 0.06194727466817773 GTHDRDPSEKPPR ddPTM_KYSE-520_SHP099_60min_R1 3 GTHDRDPSEKPPR 13 2 Q969S3 Q969S3 ZNF622 Zinc finger protein 622 0 ;; 162.93 1.4094e-06 836160000.0 652130.0 627560.0 475220.0 495600.0 652240.0 594160.0 452392.0 559990.0 539880.0 431749.0 False True 615955.0489110749 597411.0756132352 505853.4415788844 542701.6749924265 703567.5772620478 590451.6270475393 498124.1982804458 558047.5253926488 441851.40126727376 427924.0397556396 1.4394027717227755 1.3960680403802015 1.1821103620814228 1.2682196478195737 1.644141277185107 1.3798047601735788 1.1640481767859854 1.3040808030119422 1.0325463405131134 1.0 18.70699520285381 -7.585679870501543 1.1222750828091306 0.993119559527569 1.3738538968741998 0.5249249384970585 0.1279883815553157 0.4168527831990886 0.9849714954644091 0.12619873854349573 0.043585906530682374 2.5960923025991618e-08 7.585679870501543 0.38073433734663076 GTHLPES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 GTHLPESPK 9 0 E9PSF3;E9PI60;Q9ULD4-3;Q9ULD4-2;Q9ULD4 E9PSF3 BRPF3 Bromodomain and PHD finger-containing protein 3 1 GT(0.01)HLPES(0.99)PK 52.49 0.066583 2338200000.0 2136400.0 767280.0 884620.0 1183100.0 780620.0 1295500.0 960120.0 1064600.0 897490.0 1555900.0 True False 2017889.633192186 730418.7170892408 941644.0206420447 1295541.4682880146 842050.3528797684 1287414.3039586744 1057178.2994682083 1060907.151079508 734528.439881762 1542115.9364718816 1.308520057064451 0.47364708438220526 0.6106181762159711 0.8401064003346009 0.5460356987207116 0.8348362619895334 0.6855374971915963 0.6879555070980568 0.4763120738913103 1.0 20.55647980065075 -4.249650839279757 24.634107135852783 0.6771948662925177 1.3085205244321072 0.5750381756190155 0.16099700285123697 1022.5031357076732 2136642.9099211427 0.03755663365926695 0.5933251473642427 5.6279361381118336e-05 4.249650839279757 0.6313256581395895 GTHLPES(ph)PKLEDFYR ddPTM_KYSE-520_SHP099_60min_R1 2 GTHLPESPKLEDFYR 15 1 E9PSF3;E9PI60;Q9ULD4-3;Q9ULD4-2;Q9ULD4 E9PSF3 BRPF3 Bromodomain and PHD finger-containing protein 3 1 GTHLPES(1)PKLEDFYR;GTHLPES(1)PKLEDFYR 138.03 8.3418e-06 1424640000.0 1155510.0 1155560.0 1070650.0 1119150.0 1163380.0 1133100.0 1079920.0 1098470.0 1454940.0 1165260.0 True False 1091411.556847923 1100045.1630690785 1139665.812100569 1225513.6795152817 1254931.387273276 1126027.9025978965 1189088.8526035352 1094659.663954826 1190759.5720526907 1154936.7029585624 0.9449968591803263 0.9524722525928303 0.9867777248581031 1.0611089563401392 1.0865802290797069 0.9749693638736987 1.0295705812772997 0.947809227250873 1.0310171708998095 1.0 20.139382355311724 -4.922427782724784 3.7583338268840674 1.0183973734765366 0.9490660340382929 0.3555476281087022 0.03752759522898358 0.2578176318439322 7.1476087143876335 0.010662751203044165 0.024166184391808024 1.1955623149241551e-05 4.922427782724784 -0.06933133943824366 GTHS(ph)PPLTPEVAGLHGPRPL ddPTM_KYSE-520_SHP099_60min_R1 1 GTHSPPLTPEVAGLHGPRPL 20 1 O75808 O75808 CAPN15 Calpain-15 1 GT(0.144)HS(0.85)PPLT(0.006)PEVAGLHGPRPL 126.02 4.900800000000001e-07 0.0 77621.0 106500.0 73713.0 82404.0 78492.0 99181.0 82707.0 98253.0 104720.0 87901.0 True False 73315.20839637275 101383.58014024087 78464.65792497007 90235.6513843341 84668.87384161142 98561.97458967603 91067.83070253425 97912.18327542252 85705.48777637415 87122.26552594325 0.8415209126367468 1.1636931102308272 0.9006269229948444 1.035735822979302 0.9718396707257199 1.1313063772466554 1.0452876787899426 1.123847993212094 0.9837380520235989 1.0 16.4107538499099 -6.233634260436892 24.8908135175732 1.0638547636993967 0.991128060125967 0.13857800874718185 0.09038977433329203 1379.1932997120996 1234638.2506595128 0.02760726629854841 0.027598920035590793 5.839366574572104e-07 6.233634260436892 -0.0727267035734297 GTINFLHADCDKFR ddPTM_KYSE-520_SHP099_60min_R1 2 GTINFLHADCDKFR 14 1 Q9BS26 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 0 ; 106.52 0.00054019 1787960000.0 2352990.0 2282220.0 1705290.0 1284990.0 2498350.0 1957970.0 1617830.0 1530020.0 2016010.0 1535510.0 False True 2222464.954130726 2172578.725517942 1815215.7219604696 1407115.063253669 2694955.9313329994 1945749.582957908 1781376.0448992308 1524712.7177293538 1649953.4034763968 1521906.5760087026 1.4603162829871479 1.4275375110183628 1.192724803595362 0.9245738768958593 1.770776192058184 1.2784947602110774 1.1704897481756098 1.001843833100459 1.0841358001116634 1.0 20.537448369383934 -6.919855717269394 2.789892122787981 1.0359638030025302 1.3408126279691492 0.3296427354539394 0.20243140539322405 0.35519618560090355 5.5741420998726925 0.10315023538323018 0.06266325429507354 1.2026639211885695e-07 6.919855717269394 0.304848824966619 GTKT(ph)PINR ddPTM_KYSE-520_SHP099_60min_R1 8 GTKTPINR 8 1 O94776-2;O94776 O94776-2 MTA2 Metastasis-associated protein MTA2 1 GT(0.16)KT(0.84)PINR;GT(0.135)KT(0.865)PINR;GT(0.031)KT(0.969)PINR;GT(0.04)KT(0.96)PINR;GT(0.372)KT(0.628)PINR;GT(0.001)KT(0.999)PINR;GT(0.005)KT(0.995)PINR;GT(0.002)KT(0.998)PINR 123.67 0.0024502 7614180000.0 7380570.0 9477260.0 8718960.0 7652390.0 7870170.0 7071760.0 7229620.0 8422460.0 9980990.0 9110840.0 True False 6971155.069298469 9021958.203942733 9280998.11242924 8379670.844825061 8489507.603858164 7027622.522703816 7960460.543891751 8393244.452076951 8168693.816282584 9030125.04572626 0.7719887636105048 0.9990956003663103 1.0277817932124553 0.9279684170919601 0.9401317878622337 0.7782419941161081 0.8815448848805526 0.9294715643001279 0.9046047286076764 1.0 23.10631453505911 -4.242916168140737 23.84234286032262 0.926614458047604 0.7719885086844541 0.3333497281501214 0.0675252436772552 2862.842978277164 3684830.011997158 0.01829084967358227 0.5584833391979153 5.7158895983457557e-05 4.242916168140737 -0.15462594936314988 GTLDEEDEEADS(ph)DTDDIDHR ddPTM_KYSE-520_SHP099_60min_R1 6 GTLDEEDEEADSDTDDIDHR 20 0 Q9HCN4-3;Q9HCN4-2;Q9HCN4-4;Q9HCN4;Q9HCN4-5 Q9HCN4-3 GPN1 GPN-loop GTPase 1 1 GTLDEEDEEADS(1)DTDDIDHR;GTLDEEDEEADS(0.999)DT(0.001)DDIDHR;GTLDEEDEEADS(0.824)DT(0.176)DDIDHR;GTLDEEDEEADS(0.999)DT(0.001)DDIDHR;GTLDEEDEEADS(1)DTDDIDHR;GTLDEEDEEADS(1)DTDDIDHR 295.79 6.0354e-51 8955340000.0 5382420.0 5015290.0 4885570.0 4570750.0 5047780.0 4929640.0 4607610.0 4770970.0 5779360.0 4752160.0 True False 5083846.433011741 4774347.940296229 5200501.659388379 5005152.705753906 5445011.568060552 4898872.288202885 5073392.184740143 4754420.618622772 4729973.909809638 4710059.559524535 1.0793592668549905 1.0136491651452033 1.1041265176513717 1.0626516804087205 1.1560387929808276 1.0400871212544518 1.0771397093017407 1.0094183647866048 1.0042280463831572 1.0 22.167313872407966 -7.284442583295218 4.270899734749872 1.0033097493339698 1.0763072966077776 0.4610339051950011 0.03549489923610064 0.1988356030198609 8.847623800490986 0.020027250428488904 0.00963368837903878 5.194663459759361e-08 7.284442583295218 0.0729975472738078 GTLDPVEK ddPTM_KYSE-520_SHP099_60min_R1 4 GTLDPVEK 8 0 E9PKE3;P11142;E9PNE6;A8K7Q2;P11142-2;E9PN89 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ;;; 138.26 0.0050187 731790000.0 2138660.0 3165870.0 2296140.0 1467330.0 2783930.0 3098810.0 2158360.0 2570650.0 2708860.0 2908720.0 False True 2020024.2664869877 3013776.85313225 2444152.8583538947 1606784.6020311494 3003009.452605073 3079469.177344797 2376548.092363663 2561733.0151442233 2216999.3088035607 2882951.00374992 0.7006793607867411 1.0453791442213765 0.8477954898209263 0.5573402391997534 1.0416442904159626 1.0681656307510123 0.8243456407245329 0.8885801429896376 0.7690034641309752 1.0 21.459114887514026 GTLS(ph)DSEIETNSATSTIFGK ddPTM_KYSE-520_SHP099_60min_R1 6 GTLSDSEIETNSATSTIFGK 20 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 GT(0.035)LS(0.965)DSEIETNSATSTIFGK;GT(0.028)LS(0.972)DSEIETNSATSTIFGK;GT(0.051)LS(0.949)DSEIETNSATSTIFGK;GT(0.102)LS(0.898)DSEIETNSATSTIFGK;GT(0.002)LS(0.998)DSEIETNSATSTIFGK;GTLS(1)DSEIETNSATSTIFGK 407.99 2.4315999999999993e-107 2198772000.0 4747220.0 5219970.0 4131980.0 3415250.0 3831620.0 4803020.0 3705510.0 4529340.0 5535810.0 4771280.0 True False 4483882.24325155 4969194.805865289 4398334.042201758 3739834.333167643 4133146.695064399 4773042.570590193 4080099.113092568 4513628.776695898 4530646.450413769 4729010.171199667 0.9481650664570399 1.050789621077235 0.9300749803813549 0.790828143264262 0.8739982671713924 1.009311123849699 0.8627807861232656 0.954455290492824 0.9580538604052998 1.0 22.173106814085326 -9.317901536456521 12.939480283638488 1.000005337604082 0.9296355773537397 0.07934741477042351 0.07044588292805415 0.0 0.0 0.07259221520767037 0.017606198288164333 4.809483770363978e-10 9.317901536456521 -0.07036976025034236 GTNS(ph)SDSEELSAGESITK ddPTM_KYSE-520_SHP099_60min_R1 1 GTNSSDSEELSAGESITK 18 0 Q4LE39-2;Q4LE39;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 GT(0.12)NS(0.522)S(0.358)DSEELSAGESITK 84.249 0.0013582000000000002 0.0 72208.0 100800.0 74457.0 83377.0 90250.0 85472.0 101520.0 103520.0 100390.0 70763.0 True False 68202.47829692074 95957.41669611537 79256.61735541216 91301.12501179088 97352.16154774291 84938.53754377135 111782.63233972051 103160.91328174973 82161.70662595688 70136.0948727809 0.9724305070111542 1.3681602443103154 1.1300403522490792 1.3017708667327572 1.388046507641022 1.2110531345926865 1.5937960695200069 1.4708676533655343 1.1714610968145447 1.0 16.0978694841562 -3.74844826453157 1.826639877859835 1.316478109008152 9.565637869190328e-31 0.2268217882723741 0.16756231619925874 7.75022406735098 7.062570805919886 0.044577483138041704 28.11448759315562 0.00017846445722309367 3.74844826453157 -1.316478109008152 GTNTSS(ph)PYDAGADYLR ddPTM_KYSE-520_SHP099_60min_R1 1 GTNTSSPYDAGADYLR 16 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 GT(0.001)NT(0.007)S(0.035)S(0.956)PYDAGADYLR 118.5 0.00015895 473960000.0 319890.0 302710.0 266730.0 227420.0 272420.0 288230.0 256840.0 288930.0 303970.0 266510.0 True False 302145.0640150945 288167.3572230268 283923.8425830893 249033.92842368386 293857.9041422286 286431.04965651024 282803.8937168425 287927.76926676906 248776.71046012637 264148.9287416423 1.1438436091884185 1.0909276013187106 1.0748627447995005 0.9427784909446215 1.1124705503903216 1.0843543868264618 1.0706229060404262 1.0900205828522753 0.9418047297986543 1.0 18.01099203347623 -4.555789920027485 2.15360978020472 1.044035235537892 1.143330479751013 0.2563952253662075 0.05696904441330596 0.5897020329981582 4.626520213763771 0.015520945329912066 0.08921001990527268 2.781058215422968e-05 4.555789920027485 0.09929524421312119 GTPGGGGPRPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 GTPGGGGPRPPSPR 14 1 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 GTPGGGGPRPPS(1)PR;GT(0.001)PGGGGPRPPS(0.999)PR 92.319 0.0035885999999999995 988920000.0 1072940.0 1009100.0 893490.0 689040.0 800990.0 1037570.0 855590.0 1001540.0 1106980.0 858940.0 True False 1013421.8793471375 960621.3213100204 951085.7950345472 754526.1544325703 864023.3559903215 1031094.1407629505 942081.3869537188 998065.891501192 905980.3366949077 851330.4598452088 1.1903977681374172 1.1283765430931287 1.1171758088010573 0.8862905652051499 1.0149094819741566 1.2111561718940809 1.1065989429357557 1.1723601334347453 1.064193494098209 1.0 19.69935972413614 -6.230368917366153 24.90435079304728 1.1213678963094438 1.0635163116584272 0.045453076642834045 0.09264774059693859 1893.541018618181 1517757.8563370884 0.032301713525847466 0.03229923754133337 5.883436664791216e-07 6.230368917366153 -0.057851584651016585 GTPGPDS(ph)SGSLGSGEFTGVK ddPTM_KYSE-520_SHP099_60min_R1 1 GTPGPDSSGSLGSGEFTGVK 20 0 Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;M0R2S2 Q9UBC2-3 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 GT(0.331)PGPDS(0.517)S(0.122)GS(0.029)LGS(0.001)GEFTGVK 76.72800000000001 0.0091074 553710000.0 232600.0 284750.0 183280.0 172420.0 204490.0 239090.0 181580.0 232930.0 291290.0 237560.0 True False 219697.21432339566 271070.18258153606 195094.5220583686 188806.74496003654 220582.1996110572 237597.75062406735 199935.87845002435 232122.0201962708 238399.07882333887 235455.40321888344 0.9330735728292517 1.1512591296515906 0.8285837546781857 0.8018790071447989 0.9368321839104289 1.0090987396164885 0.8491454250644674 0.9858428263822263 1.0125020516166237 1.0 17.845094304348176 -7.502796359112179 23.682598057104702 1.003891556898104 0.9318663002493699 0.10480710421927597 0.09413829689811128 948.5336251344055 1118591.368908741 0.05535764624939815 0.02598213204182329 3.141981625189151e-08 7.502796359112179 -0.07202525664873405 GTPKPPGPPAQPPGPPNAS(ph)SNPDLR ddPTM_KYSE-520_SHP099_60min_R1 1 GTPKPPGPPAQPPGPPNASSNPDLR 25 1 Q8N4C8;Q8N4C8-4 Q8N4C8 MINK1 Misshapen-like kinase 1 1 GTPKPPGPPAQPPGPPNAS(0.5)S(0.5)NPDLR 86.869 0.0036185 4073500000.0 391930.0 372140.0 299420.0 276890.0 307900.0 367840.0 315170.0 364530.0 452300.0 347740.0 True False 370188.8616069151 354261.835806472 318721.09228893905 303205.5423499858 332129.97828864265 365544.1741166803 347030.45936278324 363265.53051194164 370173.7215551383 344659.29413762625 1.0740718962277414 1.027860968301674 0.9247424854345295 0.879725420167873 0.9636472421835214 1.060595725501354 1.0068797367878615 1.0539844324258545 1.0740279686388607 1.0 18.39481139422247 -6.253875078307165 24.06542750319714 1.0404579851152318 0.9690262677841208 0.2654355896623313 0.053796394640471104 512.0764389366152 1629144.1643505837 0.019838407600938284 0.019446946842579253 5.573460424688521e-07 6.253875078307165 -0.07143171733111098 GTPKPPGPPAQPPGPPNAS(ph)SNPDLRR ddPTM_KYSE-520_SHP099_60min_R1 2 GTPKPPGPPAQPPGPPNASSNPDLRR 26 2 Q8N4C8;Q8N4C8-4 Q8N4C8 MINK1 Misshapen-like kinase 1 1 GTPKPPGPPAQPPGPPNAS(0.5)S(0.5)NPDLRR;GTPKPPGPPAQPPGPPNAS(0.594)S(0.406)NPDLRR 156.9 1.1269e-07 6520280000.0 296903.0 302794.0 310850.0 252713.0 262668.0 304790.0 239138.0 289495.0 392710.0 284409.0 True False 280433.1987285428 288247.32173693995 330887.8883775853 276730.76753906626 283338.4772235179 302887.6925538899 263312.4028019711 288490.8094136407 321403.7634134825 281889.3575268538 0.9948342895557087 1.0225548217423586 1.173821854363777 0.9816999476920795 1.0051407392935225 1.0744914075907803 0.9340984175923954 1.0234185921196335 1.1401770050253297 1.0 18.10476948575039 -2.6018406995518157 12.648719103812695 1.0351649168145018 1.039644666725774 0.0 0.06995310630202793 0.0 0.0 0.01587337407253821 0.0 0.0025012626636935252 2.6018406995518157 0.004479749911272091 GTPKPPGPPAQPPGPPNASS(ph)NPDLR ddPTM_KYSE-520_SHP099_60min_R1 4 GTPKPPGPPAQPPGPPNASSNPDLR 25 1 Q8N4C8;Q8N4C8-4 Q8N4C8 MINK1 Misshapen-like kinase 1 1 GTPKPPGPPAQPPGPPNAS(0.095)S(0.905)NPDLR;GTPKPPGPPAQPPGPPNAS(0.163)S(0.837)NPDLR;GTPKPPGPPAQPPGPPNAS(0.288)S(0.712)NPDLR;GTPKPPGPPAQPPGPPNAS(0.185)S(0.815)NPDLR 144.55 8.143099999999999e-07 9694980000.0 2190250.0 2017520.0 1759060.0 1574550.0 1979630.0 2299940.0 1731340.0 1946820.0 2341660.0 2251300.0 True False 2068752.4663448697 1920595.3108407396 1872451.822195515 1724194.7585942792 2135415.6184460716 2285585.2213405757 1906360.7434500775 1940066.935811205 1916473.5724448448 2231355.233484897 0.9271282471298501 0.86073041262963 0.8391545165451527 0.7727119074184606 0.9570038810499087 1.0243036102194196 0.8543510754550507 0.8694567797621529 0.858883222037096 1.0 21.089488779360806 -5.784761487871876 24.999976696003316 0.9220053561181271 0.8499328056057477 0.25619225896631437 0.06422681657838494 380.1941748153816 407544.65777045646 0.021281859810214118 0.024145263395203384 1.6414910234898809e-06 5.784761487871876 -0.07207255051237937 GTPKPPGPPAQPPGPPNASS(ph)NPDLRR ddPTM_KYSE-520_SHP099_60min_R1 2 GTPKPPGPPAQPPGPPNASSNPDLRR 26 2 Q8N4C8;Q8N4C8-4 Q8N4C8 MINK1 Misshapen-like kinase 1 1 GTPKPPGPPAQPPGPPNAS(0.21)S(0.79)NPDLRR;GTPKPPGPPAQPPGPPNAS(0.287)S(0.713)NPDLRR 152.31 5.0132e-07 9235100000.0 724380.0 718980.0 714550.0 521690.0 578510.0 648990.0 635810.0 614650.0 876340.0 656910.0 True False 684197.1973842711 684439.1215890179 760611.0363204229 571271.2607481818 624035.4457283623 644939.4126793832 700083.8797076211 612517.9226103886 717218.7467336498 651090.288468246 1.0508484145784334 1.0512199824070918 1.1682113061612933 0.8774071290360569 0.9584468648679543 0.9905529603223949 1.0752485363506763 0.9407572704722679 1.1015657266536374 1.0 19.312498094161523 -5.249157236416186 24.990282936437012 0.991539208369696 1.0862058969258517 0.3090035845500617 0.06714517793456774 990.0886229155468 2014515.1276198959 0.018219211516653525 0.03126283561286147 5.634336276206197e-06 5.249157236416186 0.09466668855615568 GTPS(ph)QSPVVGR ddPTM_KYSE-520_SHP099_60min_R1 1 GTPSQSPVVGR 11 0 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 1 GT(0.001)PS(0.499)QS(0.499)PVVGR 137.31 0.00010702 558770000.0 1059900.0 931560.0 787880.0 723630.0 768360.0 892300.0 763000.0 904380.0 916590.0 855910.0 True False 1001105.2341417328 886806.4592999318 838668.005452571 792403.5776327064 828825.5606296249 886730.8247181212 840131.4861623985 901242.9168638778 750160.3613535783 848327.3032879047 1.180093143603535 1.045358856025135 0.9886137133652345 0.9340776544165773 0.9770115348372074 1.0452696987134258 0.9903388502365287 1.0623764122301445 0.8842817606437328 1.0 19.694261470034572 -4.307731653729671 2.2814003792694044 0.9877863358077306 1.2167357923681617 0.6051305746172488 0.04775947606831645 0.35930994400156996 2.384768003017239 0.012402569331241604 0.1583808907727572 4.9234365599688724e-05 4.307731653729671 0.22894945656043109 GTPSQS(ph)PVVGR ddPTM_KYSE-520_SHP099_60min_R1 9 GTPSQSPVVGR 11 0 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 1 GTPS(0.112)QS(0.888)PVVGR;GTPS(0.035)QS(0.965)PVVGR;GTPS(0.008)QS(0.992)PVVGR;GTPSQS(1)PVVGR;GTPSQS(1)PVVGR;GTPS(0.008)QS(0.992)PVVGR;GTPS(0.001)QS(0.999)PVVGR;GTPS(0.004)QS(0.996)PVVGR;GT(0.004)PS(0.033)QS(0.963)PVVGR 224.8 4.7555e-10 42357150000.0 27603900.0 27124070.0 24290820.0 17890350.0 20018060.0 23982090.0 19883570.0 22275730.0 27150700.0 21952450.0 True False 26072656.6399896 25820988.963140897 25856645.123886187 19590643.485070154 21593367.43481893 23832408.880605422 21893595.30054274 22198460.691824455 22220817.293449204 21757968.371747654 1.1983038211345363 1.1867371310581096 1.1883758943900569 0.9003893723142031 0.9924349123908804 1.0953416455716238 1.0062334371701356 1.0202451034283502 1.0212726167164832 1.0 24.375040516900853 -5.235962737791547 24.319733424127453 1.0092502711090883 1.1906988359995876 0.7840074735267436 0.04470368871635252 258.09843890687193 246377.3589694934 0.012684188900946664 0.021956946910655566 5.808142489009175e-06 5.235962737791547 0.18144856489049932 GTQEVAPPTPLTPTS(ph)HTANTSPRPVSGMER ddPTM_KYSE-520_SHP099_60min_R1 1 GTQEVAPPTPLTPTSHTANTSPRPVSGMER 30 1 P48730-2;H7BYT1;P48730 P48730-2 CSNK1D Casein kinase I isoform delta 1 GTQEVAPPTPLTPT(0.07)S(0.253)HT(0.253)ANT(0.253)S(0.172)PRPVSGMER 140.78 1.2756000000000001e-06 2070700000.0 119500.0 171350.0 151420.0 146240.0 94143.0 126570.0 80624.0 88822.0 198530.0 88104.0 True False 112871.09678265602 163118.08879840627 161180.7754805662 160138.60563134073 101551.51849960284 125780.0296812423 88774.26073441324 88513.89721321056 162481.95653402962 87323.46710387476 1.29256316229853 1.8679754046454748 1.8457899213831628 1.8338553305590746 1.162935026145987 1.4403920716022638 1.016614017728049 1.013632419197462 1.8606906244429213 1.0 16.414081791992967 -5.762740786335078 24.999197951448828 1.247671512494974 1.7310226659407821 0.38140803706956383 0.28711775003040635 35.547407822098855 682847.6555751809 0.08581367451738704 0.10276782124746948 1.7268682856895708e-06 5.762740786335078 0.48335115344580815 GTQEVAPPTPLTPTSHT(ph)ANTSPRPVSGMER ddPTM_KYSE-520_SHP099_60min_R1 1 GTQEVAPPTPLTPTSHTANTSPRPVSGMER 30 1 P48730-2;H7BYT1;P48730 P48730-2 CSNK1D Casein kinase I isoform delta 1 GTQEVAPPTPLTPT(0.061)S(0.061)HT(0.292)ANT(0.292)S(0.292)PRPVS(0.001)GMER 133.47 2.2547e-05 1880100000.0 65090.0 100950.0 78873.0 74372.0 62452.0 98649.0 68015.0 49970.0 103710.0 68973.0 True False 61479.32794630191 96100.21047096066 83957.27978126204 81440.29251924284 67366.61709672715 98033.29499901138 74890.61996243196 49796.6657330857 84878.87831634612 68361.95288018206 0.899320826221227 1.4057557811345067 1.228128750628495 1.1913102111343012 0.9854402084563114 1.4340329798774805 1.095501471318303 0.7284266121005097 1.241609912243339 1.0 16.060905990289534 -7.002899070241937 24.99080608536293 0.9734037519329608 1.1988389890593207 0.1790166439419476 0.19155970821196497 168.18715783925362 1449822.8582588949 0.07714476933997362 0.05092997462609342 9.93346874772282e-08 7.002899070241937 0.22543523712635993 GTQEVAPPTPLTPTSHTANT(ph)SPRPVSGMER ddPTM_KYSE-520_SHP099_60min_R1 1 GTQEVAPPTPLTPTSHTANTSPRPVSGMER 30 1 P48730-2;H7BYT1;P48730 P48730-2 CSNK1D Casein kinase I isoform delta 1 GTQEVAPPTPLTPTS(0.002)HT(0.118)ANT(0.44)S(0.44)PRPVSGMER 191.25 6.3645e-15 1086300000.0 679380.0 848750.0 649420.0 730280.0 575180.0 639380.0 540910.0 618650.0 762420.0 676120.0 True False 641693.4370895464 807974.776000278 691282.6523087388 799685.5916333116 620443.3936734704 635389.3922540309 595590.4615728754 616504.047543996 623983.7470441483 670130.1028134006 0.9575654554175841 1.2056983749993702 1.0315648400311128 1.1933288599870375 0.9258551303227075 0.9481582599953082 0.8887684034375024 0.9199766507365259 0.9311382139445512 1.0 19.354081690099882 -5.781669051363376 24.964169730905997 0.9299296065761482 1.100123976947805 0.5453981529040401 0.0720485384089786 158.79531445667544 195958.42834859513 0.020615819175497166 0.023404414828526714 1.6532211346678632e-06 5.781669051363376 0.17019437037165686 GTQQPES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 GTQQPESPK 9 0 H3BV62;A4GXA9-2;A4GXA9 H3BV62 EME2 Probable crossover junction endonuclease EME2 1 GT(0.016)QQPES(0.984)PK 47.187 0.057976 914170000.0 534530.0 503560.0 522290.0 539370.0 413340.0 530290.0 479150.0 517850.0 803880.0 448760.0 True False 504878.5553408632 479368.2217410302 555957.6490935471 590631.5626324965 445867.50641710794 526980.2634089125 527587.1580533596 516053.6992170989 657915.656165696 444784.335529997 1.1351086695516355 1.0777542810041267 1.24994880593328 1.3279054936336967 1.0024352721096175 1.1847995113878556 1.1861639808530942 1.16023352891279 1.4791790169088026 1.0 18.762746454379673 GTQS(ph)T(ph)EGSPVSK ddPTM_KYSE-520_SHP099_60min_R1 1 GTQSTEGSPVSK 12 0 A0A087WXK8;Q9H4H8-2;Q9H4H8 A0A087WXK8 FAM83D Protein FAM83D 2 GT(0.004)QS(0.993)T(0.803)EGS(0.2)PVSK 122.97 0.0018590999999999998 864850000.0 2253200.0 1980000.0 1922500.0 1913600.0 2076000.0 1971100.0 1963600.0 1975100.0 2245100.0 1972900.0 True False 2128210.5043571587 1884877.827959409 2046427.4261087587 2095467.9686551814 2239369.389175781 1958797.6337575796 2162099.850889237 1968248.839091807 1837446.4343653342 1955421.6408929732 1.0883639926298856 0.9639239888429642 1.0465402362910468 1.0716195038622227 1.1452104969816836 1.001726478215238 1.1056949589152962 1.0065598119252561 0.9396676378840915 1.0 20.89904829380712 -7.503489851288138 7.807999730593448 0.9706316378876267 1.0575973626056159 0.35483642526991244 0.04997412391249853 0.19758512549648627 64.91893706613578 0.029548562161639372 0.013072512099786236 3.136968434835541e-08 7.503489851288138 0.08696572471798913 GTQS(ph)TEGS(ph)PVSK ddPTM_KYSE-520_SHP099_60min_R1 1 GTQSTEGSPVSK 12 0 A0A087WXK8;Q9H4H8-2;Q9H4H8 A0A087WXK8 FAM83D Protein FAM83D 2 GTQS(0.957)T(0.043)EGS(1)PVSK 110.22 0.0019053000000000002 545120000.0 5171700.0 4956000.0 4970400.0 4503000.0 4788300.0 4717800.0 4503100.0 4376900.0 5660500.0 4471400.0 True False 4884815.491471642 4717906.320892335 5290799.93692118 4930963.766123685 5165111.968299799 4688354.460220947 4958317.294020841 4361717.555476145 4632695.8895928785 4431786.874696565 1.1022225638515377 1.0645607413635747 1.1938299576473723 1.1126355814349258 1.1654693951530426 1.0578925821070646 1.1188077031254637 0.9841893752561787 1.0453336364262935 1.0 22.079457072955975 -7.101604644551673 1.6389843488063787 1.0077527170489773 1.122725869301054 0.541000419136934 0.04318668715938757 0.30096952303978486 1.5299818447694127 0.029591913152892675 0.013227443571272155 7.913987417598156e-08 7.101604644551673 0.11497315225207672 GTQSIPNDS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 2 GTQSIPNDSPAR 12 0 J3QRX6;H9KV77;Q9NQ92 J3QRX6 COPRS Coordinator of PRMT5 and differentiation stimulator 1 GTQSIPNDS(1)PAR;GTQSIPNDS(1)PAR 283.88 1.6579999999999998e-29 1751960000.0 1879130.0 1734550.0 1860630.0 1376500.0 1685980.0 1922510.0 1647380.0 1660440.0 1960730.0 2145710.0 True False 1774890.9129472177 1651219.614387372 1980569.1869132584 1507322.1461401852 1818657.0340860204 1910510.9019711236 1813913.2472794396 1654680.32118961 1604710.857980997 2126700.6787371202 0.8345748561105389 0.7764231379132776 0.9312872313039192 0.708760833722621 0.8551542077684281 0.8983449909394985 0.8529236226870345 0.7780504034879954 0.7545541664725044 1.0 21.020185565627486 GTQSTEGS(ph)PVSK ddPTM_KYSE-520_SHP099_60min_R1 4 GTQSTEGSPVSK 12 0 A0A087WXK8;Q9H4H8-2;Q9H4H8 A0A087WXK8 FAM83D Protein FAM83D 1 GTQS(0.011)T(0.192)EGS(0.796)PVSK;GTQST(0.012)EGS(0.984)PVS(0.004)K;GTQSTEGS(1)PVSK;GTQST(0.028)EGS(0.971)PVSK 229.79 1.4935e-11 3205140000.0 8081500.0 7571100.0 6778700.0 6099000.0 6591600.0 7697100.0 6626300.0 7055700.0 8344700.0 7329400.0 True False 7633203.084929156 7207372.991547206 7215665.848303475 6678647.126268782 7110321.418926327 7649059.543805732 7296151.070455979 7031225.423512766 6829512.832768426 7264467.218186907 1.050758831400478 0.9921406174844093 0.9932821818286612 0.9193581477728333 0.9787808527961047 1.0529415735617862 1.0043614832743344 0.9678927872246145 0.9401257693985385 1.0 22.7924255626585 -4.216946356384352 2.470232203681009 0.9821062560271631 1.0708498509777296 0.26147699486938547 0.03444703466979481 0.9812524701194627 6.7493378040744485 0.00974838381858279 0.19246819091007644 6.0681127767562606e-05 4.216946356384352 0.0887435949505665 GTRPEDSSVLIPTDNS(ph)TPHKEDLSSK ddPTM_KYSE-520_SHP099_60min_R1 1 GTRPEDSSVLIPTDNSTPHKEDLSSK 26 2 Q7KZ85-2;U3KQE3;U3KQP6;U3KQ49;L0R819;U3KQP1 Q7KZ85-2 SUPT6H;ASNSD1 Transcription elongation factor SPT6 1 GTRPEDS(0.001)S(0.001)VLIPT(0.087)DNS(0.456)T(0.456)PHKEDLSSK 80.342 0.0076256 1356600000.0 439620.0 490830.0 455260.0 333110.0 320630.0 381100.0 341480.0 340290.0 483910.0 483590.0 True False 415233.4022392574 467249.79004914983 484606.78804175474 364768.67424682644 345861.7568648511 378721.41353813285 376000.1309236386 339109.613414283 396044.1423783923 479305.76882732636 0.8663225632672251 0.9748469983833643 1.0110597859637658 0.7610354349359755 0.7215889717143181 0.7901457444685381 0.7844681941624941 0.7075016314615856 0.8262870345736862 1.0 18.870586778484007 -5.269061461399564 24.788521651432585 0.782366060146153 0.9531535057943354 0.3982661675836432 0.08394964228439643 422.07785488237045 1372680.9417696765 0.02225174877472572 0.03372701719764444 5.381936119114947e-06 5.269061461399564 0.1707874456481825 GTS(ph)PRPPEGGLGYSQLGDDDLK ddPTM_KYSE-520_SHP099_60min_R1 9 GTSPRPPEGGLGYSQLGDDDLK 22 1 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;P21127-5;P21127-4;P21127-12;Q9UQ88-8;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 GT(0.003)S(0.997)PRPPEGGLGYSQLGDDDLK;GT(0.176)S(0.824)PRPPEGGLGYSQLGDDDLK;GT(0.138)S(0.862)PRPPEGGLGYSQLGDDDLK;GT(0.134)S(0.866)PRPPEGGLGYSQLGDDDLK;GT(0.098)S(0.902)PRPPEGGLGYSQLGDDDLK;GT(0.131)S(0.869)PRPPEGGLGYSQLGDDDLK;GT(0.143)S(0.857)PRPPEGGLGYSQLGDDDLK;GT(0.28)S(0.72)PRPPEGGLGYSQLGDDDLK;GT(0.458)S(0.542)PRPPEGGLGYSQLGDDDLK 151.91 1.8096e-07 14220100000.0 5599810.0 5215440.0 4170150.0 4434070.0 4439520.0 5323430.0 4922640.0 5384050.0 5588280.0 5134220.0 True False 5289177.376355519 4964882.433864963 4438964.541475916 4855482.679648238 4788884.966586541 5290204.498743901 5420268.491536665 5365373.9871967165 4573589.221074832 5088734.80516272 1.0393894708345661 0.9756614608463966 0.8723120208528873 0.954163041611475 0.9410757585024927 1.0395913132232362 1.0651505136478305 1.0543630573464615 0.89876745324491 1.0 22.278875577843895 -6.256246958177518 24.598889288209286 1.0183206618183982 0.9527745414815064 0.1797815585563861 0.057629950128286866 547.499984641457 2593760.306889769 0.019988774740690652 0.01938341260298033 5.543104190154733e-07 6.256246958177518 -0.06554612033689178 GTS(ph)PSSSSRPQR ddPTM_KYSE-520_SHP099_60min_R1 2 GTSPSSSSRPQR 12 1 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 GT(0.007)S(0.647)PS(0.244)S(0.046)S(0.046)S(0.01)RPQR;GT(0.027)S(0.702)PS(0.026)S(0.026)S(0.026)S(0.193)RPQR 128.54 0.00096586 2120300000.0 2524200.0 2431000.0 2262450.0 2146640.0 2079870.0 2159610.0 2139940.0 1990110.0 2541300.0 2137350.0 True False 2384177.5941320527 2314211.1109946063 2408291.1470479886 2350656.0201891502 2243543.93615849 2146131.0729233483 2356266.0190017894 1983206.7729051637 2079863.9809596986 2118414.741833137 1.1254536456203765 1.0924258905940392 1.1368364746952297 1.1096297499115055 1.0590673732836067 1.013083524459534 1.1122779559978098 0.9361749301220529 0.9818020710901592 1.0 21.01455363618521 -6.559708559355822 0.7217969720492193 0.9737813222394661 1.1208135177041814 0.6336561856341076 0.03995408126256701 0.44979343466897564 0.48461520936156055 0.03220491763800873 0.024269634490112532 2.7560775953042716e-07 6.559708559355822 0.14703219546471524 GTSPSS(ph)SSRPQR ddPTM_KYSE-520_SHP099_60min_R1 1 GTSPSSSSRPQR 12 1 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 GT(0.005)S(0.013)PS(0.063)S(0.306)S(0.306)S(0.306)RPQR 63.091 0.05248099999999999 201780000.0 119260.0 108810.0 106820.0 88831.0 101250.0 105660.0 91422.0 94709.0 110450.0 107260.0 True False 112644.41006108407 103582.60427286032 113705.78811804307 97273.47153198607 109217.79896630434 105000.5367474131 100663.8279527377 94380.47658424685 90395.06421791943 106309.7598470174 1.0595867230175517 0.9743470817911589 1.0695705481949047 0.9150003882236702 1.0273543945868346 0.9876848268542013 0.9468916880030174 0.8877875062464904 0.8502988281414646 1.0 16.697914525083227 -6.88998007744242 2.4722148175590934 0.9027366071090075 1.0052955961762213 0.3764983753889992 0.05417581804915487 0.28051269676433127 3.4672812624157636 0.025919518511648126 0.015689804696855502 1.2883086494151286e-07 6.88998007744242 0.10255898906721383 GTSPSSSS(ph)RPQR ddPTM_KYSE-520_SHP099_60min_R1 3 GTSPSSSSRPQR 12 1 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 GTSPS(0.018)S(0.149)S(0.149)S(0.684)RPQR;GT(0.01)S(0.148)PS(0.018)S(0.048)S(0.048)S(0.73)RPQR;GT(0.008)S(0.129)PS(0.083)S(0.129)S(0.129)S(0.523)RPQR 101.32 0.0019958 5598390000.0 864110.0 822350.0 771700.0 730030.0 755250.0 750890.0 726920.0 708550.0 875440.0 745340.0 True False 816176.0957394213 782843.0716274849 821445.016763656 799411.831708477 814683.8782153222 746203.4169814966 800404.1676555335 706092.205426814 716482.164046496 738736.8674657451 1.1048265379516435 1.0597048910162656 1.1119588759413663 1.082133391353377 1.10280657984502 1.0101071840929852 1.0834766787819046 0.9558101626213412 0.9698746544279097 1.0 19.494701053147697 -6.95989015357174 1.1797586957020696 0.9710751879058862 1.0891351750490659 0.6730723877359712 0.03195137128580454 0.2747805330421585 0.7274638299863855 0.022959866594740214 0.01100047591018067 1.096755564269739e-07 6.95989015357174 0.11805998714317967 GTSS(ph)PDYR ddPTM_KYSE-520_SHP099_60min_R1 2 GTSSPDYR 8 0 Q66K14;Q66K14-2;G3V133 Q66K14 TBC1D9B TBC1 domain family member 9B 1 GT(0.031)S(0.071)S(0.898)PDYR;GT(0.008)S(0.085)S(0.907)PDYR 118.18 0.0017428 1437850000.0 4109600.0 3687200.0 3698700.0 3174200.0 3803400.0 4033200.0 3406300.0 3443300.0 4273800.0 3694600.0 True False 3881632.2957155076 3510061.3773999657 3937124.12012924 3475875.013641969 4102705.941614241 4008027.302760425 3750642.0462843818 3431355.995972262 3497785.6537305918 3661868.7183553074 1.0600140513663485 0.9585437511196402 1.075168014733625 0.9492079812197975 1.1203858622918987 1.0945305828879064 1.0242426298583818 0.9370505225303168 0.9551914398781582 1.0 21.80414863933086 -7.146571710173773 5.299871750470675 0.9601892925374071 1.0412026196757562 0.305314326508637 0.05304093454136293 0.2784495503673904 11.027523428114742 0.02594906095328137 0.01471587842938013 7.135563738387905e-08 7.146571710173773 0.08101332713834908 GTT(ph)PPPPSWEPNSQTK ddPTM_KYSE-520_SHP099_60min_R1 2 GTTPPPPSWEPNSQTK 16 0 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 GT(0.004)T(0.996)PPPPSWEPNSQTK;GT(0.254)T(0.746)PPPPSWEPNSQTK 196.52 1.1277999999999998e-11 564380000.0 354640.0 453820.0 294130.0 289220.0 298090.0 411490.0 325970.0 391710.0 452580.0 425940.0 True False 334967.4122426868 432017.8060022929 313090.0904246396 316707.3818428364 321547.9870999079 408921.7382755352 358922.2287606255 390351.2494358012 370402.8806133635 422166.5029763057 0.7934485798402792 1.0233351129389345 0.7416270315558691 0.7501954314471315 0.7616615359886924 0.9686266802141005 0.8501911597206238 0.9246381384685791 0.877385766047271 1.0 18.6874525862646 -6.262393491461398 24.99694502578918 0.9148346573112229 0.818108925789447 0.29213038381351164 0.08496939699257848 138.82700670163254 3637120.8123334227 0.03017837860295891 0.028148715058922642 5.465205648692496e-07 6.262393491461398 -0.09672573152177588 GTTVT(ph)PDKR ddPTM_KYSE-520_SHP099_60min_R1 1 GTTVTPDKR 9 1 Q16186;A0A087WX59;A0A087WUX6 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 GT(0.139)T(0.139)VT(0.723)PDKR 61.958 0.059432000000000006 646680000.0 1009600.0 869130.0 818470.0 695670.0 749940.0 804190.0 843200.0 939220.0 1023800.0 829930.0 True False 953595.4754122973 827375.6902092728 871229.885798303 761786.2676391869 808956.0114250882 799170.7519108659 928438.8848389713 935962.0650355958 837903.7278977447 822577.4658757704 1.159277411516539 1.0058331580094937 1.0591463077228038 0.9260966890554665 0.9834405207828298 0.9715446691212429 1.128694771440759 1.1378406336953428 1.0186319983925853 1.0 19.64979202486182 -6.759311939469755 24.999893350388277 1.0827785678722073 1.013206045228901 0.11208234624589741 0.07058230914932925 101.96513955465966 1198229.1146341239 0.02827967108324259 0.020812222679532647 1.740556239891059e-07 6.759311939469755 -0.06957252264330638 GTTVT(ph)PDKRK ddPTM_KYSE-520_SHP099_60min_R1 2 GTTVTPDKRK 10 2 Q16186;A0A087WX59;A0A087WUX6 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 GTTVT(1)PDKRK;GTTVT(1)PDKRK 141.58 0.00018235 1438290000.0 1437040.0 1431070.0 1455170.0 1006160.0 1095050.0 1177150.0 947200.0 944060.0 1547080.0 1183940.0 True False 1357324.5265317822 1362319.2491201386 1548972.5865543203 1101785.1438869666 1181224.205017792 1169802.9702083778 1042952.2197811608 940785.2762052604 1266169.2707130723 1173451.2126913818 1.1566944682929559 1.1609509065106989 1.3200144750812923 0.9389270997981717 1.0066240438821332 0.996891014774584 0.8887904401147504 0.8017250875283618 1.0790131340944598 1.0 20.16232643106481 -5.276046113062264 24.598277715483142 0.9512476103451438 1.2073930425159838 0.6655743461681976 0.0822625014445733 364.84946582698785 614419.1320375606 0.023541703664051946 0.03509278396220273 5.296072076101758e-06 5.276046113062264 0.25614543217083996 GTVSFHSHSDHR ddPTM_KYSE-520_SHP099_60min_R1 1 GTVSFHSHSDHR 12 0 E9PLT0;O75534-2;O75534;O75534-3;O75534-4 E9PLT0 CSDE1 Cold shock domain-containing protein E1 0 122.18 0.00012841 102180000.0 58451.0 134480.0 159340.0 18473.0 29767.0 71566.0 25806.0 47766.0 28431.0 50329.0 False True 55208.60651082028 128019.37894140466 169611.31135301435 20228.668365890033 32109.49354893806 71119.33004794015 28414.722322289483 47600.310894668204 23268.647087185767 49883.12421536946 1.1067591972078201 2.5663865476565455 3.4001741875813685 0.4055212796727232 0.6436945170135278 1.4257192420603764 0.5696259560569913 0.9542367612973628 0.4664633070439577 1.0 15.606264204558048 -5.276181443383147 24.999853091870996 0.7912107777159921 2.37863468606127 0.5990432301933037 0.59112704233051 520.2127893153573 882184.9069756782 0.1675634549451836 0.24970573591052703 5.294422026408136e-06 5.276181443383147 1.587423908345278 GTWVQLK ddPTM_KYSE-520_SHP099_60min_R1 1 GTWVQLK 7 0 P46778 P46778 RPL21 60S ribosomal protein L21 0 114.6 0.021074000000000002 374400000.0 472770.0 455770.0 352110.0 297800.0 552560.0 505010.0 373340.0 439570.0 360740.0 400680.0 False True 446544.50565636996 433874.1250752829 374807.57399591914 326102.822463165 596043.3283636658 501858.0452660518 411080.85064727464 438045.23426640936 295238.7095153668 397130.28692432295 1.1244282301275685 1.092523384291669 0.9437899508967503 0.821148205513993 1.500876029828588 1.2637113355237137 1.0351284305989237 1.1030265096599976 0.7434303533027372 1.0 18.599252865843898 -7.7367768071037215 22.714875198876445 0.8717156981806929 1.1103693575535594 0.2184780437394087 0.18070751216046343 112.87143021434514 103958.96376452148 0.12930664634861494 0.048793596478886626 1.8332563285759895e-08 7.7367768071037215 0.23865365937286642 GTYVPS(ph)SPTR ddPTM_KYSE-520_SHP099_60min_R1 2 GTYVPSSPTR 10 0 Q9Y4P8-4;Q9Y4P8 Q9Y4P8-4 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 1 GTYVPS(0.5)S(0.5)PTR;GTYVPS(0.562)S(0.436)PT(0.002)R 100.69 0.0026229 2789200000.0 4201000.0 4208500.0 3706700.0 3152000.0 3332300.0 4385200.0 3903500.0 4423500.0 5301900.0 4763900.0 True False 3967962.1555141187 4006317.3429127163 3945639.8129296945 3451565.1323166424 3594533.051806578 4357830.340192652 4298103.874488767 4408155.91095266 4339208.610022517 4721695.552258113 0.8403680651575413 0.8484912461153339 0.8356404535745053 0.7310012037235138 0.7612801401580246 0.9229375956076953 0.9102882273790891 0.9335959640270527 0.9189937305354906 1.0 22.170873591109405 -6.300421694142961 9.617022302277785 0.9314685716238421 0.8036607245924234 0.7259937249862094 0.041027611154132754 0.3286514607652932 79.21562649153942 0.01565051710792366 0.013851095484777674 5.007008237025677e-07 6.300421694142961 -0.12780784703141868 GTYVPSS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 7 GTYVPSSPTR 10 0 Q9Y4P8-4;Q9Y4P8 Q9Y4P8-4 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 1 GTYVPSS(0.993)PT(0.006)R;GTYVPS(0.003)S(0.997)PTR;GTYVPS(0.003)S(0.995)PT(0.002)R;GTYVPS(0.017)S(0.974)PT(0.01)R;GTYVPS(0.005)S(0.993)PT(0.002)R;GTYVPS(0.002)S(0.998)PTR;GTYVPS(0.005)S(0.994)PTR 184.58 4.2937e-06 15863110000.0 19576720.0 18585370.0 16631720.0 13922490.0 14708530.0 19429750.0 17751850.0 19482040.0 23801000.0 19901200.0 True False 18490760.316376224 17692500.9279909 17703827.282892883 15245679.26365075 15866007.630912146 19308481.7231502 19546380.23936039 19414461.3503823 19479338.374383878 19724890.85089932 0.9374328332738618 0.8969631853341404 0.8975374016878633 0.7729157732173535 0.8043647871536265 0.9788891542722968 0.9909499822894688 0.9842620421647166 0.9875511363600652 1.0 24.233513981215697 -6.329680327443254 7.785234173365721 0.988051421118058 0.8609499921158725 0.6704095815685029 0.04435093556242872 0.21346155887699095 22.08058132760184 0.01757561752581079 0.015495850015858376 4.6807955536068624e-07 6.329680327443254 -0.12710142900218546 GVAPADS(ph)PEAPR ddPTM_KYSE-520_SHP099_60min_R1 2 GVAPADSPEAPR 12 0 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 GVAPADS(1)PEAPR;GVAPADS(1)PEAPR 122.39 0.00082094 310950000.0 1288640.0 1202260.0 992530.0 861950.0 912490.0 1096070.0 859350.0 1048420.0 1289730.0 1100180.0 True False 1217156.570359848 1144501.6249709488 1056510.0719041482 943869.468845283 984297.7716421037 1089229.0205634765 946221.4844477815 1044783.2757230672 1055547.5434475085 1090433.2611270875 1.1162137232514142 1.0495842944005354 0.9688901738123104 0.8655912310210402 0.9026666800540543 0.9988956311160517 0.8677481861381899 0.958135919884876 0.9680074710454809 1.0 20.056470043303385 -4.676488933174432 2.4551123119328615 0.9329717705853103 1.1087237865301258 0.6227839640938551 0.04574773478681388 0.186451719911104 2.1335980062582296 0.012318332790215488 0.04745483419996555 2.106255570559695e-05 4.676488933174432 0.1757520159448155 GVAPADS(ph)PEAPRR ddPTM_KYSE-520_SHP099_60min_R1 4 GVAPADSPEAPRR 13 1 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR;GVAPADS(1)PEAPRR 225.72 1.2054999999999999e-11 2884140000.0 5224570.0 4756640.0 4865150.0 3836140.0 4090310.0 4538610.0 3902470.0 3813130.0 5050090.0 4063250.0 True False 4934752.68717792 4528123.874537802 5178765.353515236 4200725.592222452 4412194.126319647 4510282.851478099 4296969.75203693 3799903.1420212323 4133120.958408992 4027252.766160666 1.2253396977320616 1.124370417617128 1.285930050636566 1.04307473012854 1.0955841072091335 1.1199403447869312 1.0669729469534626 0.9435472175847123 1.02628794326939 1.0 21.941364593642202 -6.023201150580011 0.5175809089590975 0.9815420822777653 1.22365638017451 0.6091946439043665 0.06095006764607813 0.7483792302363069 0.42083534414439583 0.05206632023126354 0.08431915948721233 9.479792895179148e-07 6.023201150580011 0.24211429789674466 GVDDLDFFIGDEAIEKPTYATK ddPTM_KYSE-520_SHP099_60min_R1 1 GVDDLDFFIGDEAIEKPTYATK 22 1 P61158;B4DXW1;F8WDR7 P61158 ACTR3 Actin-related protein 3 0 174.71 8.7102e-10 199260000.0 460430.0 360970.0 220410.0 305600.0 398680.0 316840.0 277830.0 309710.0 318410.0 264320.0 False True 434889.0300555504 343628.45937298407 234617.98126846924 334644.1321180096 430053.84782109776 314862.4840341697 305915.7677595011 308635.6882968574 260594.77046290363 261978.33043784797 1.6600190913833004 1.3116674909664212 0.8955625485373122 1.2773733291555613 1.6415626708603834 1.2018646103589397 1.1677140137820556 1.178096248575332 0.9947187999380255 1.0 17.99908795847907 -7.27975093491153 1.1865632325814717 1.0000959856663805 1.3220802628096582 0.28515455994160177 0.20547262407015446 0.7618209882603177 1.8892568147912032 0.19005188070012247 0.072939417786792 5.251085202681504e-08 7.27975093491153 0.3219842771432777 GVDEATIIDILTK ddPTM_KYSE-520_SHP099_60min_R1 2 GVDEATIIDILTK 13 0 P04083;Q5T3N1;Q5T3N0 P04083 ANXA1 Annexin A1;Annexin 0 ; 244.12 4.2882e-15 118216000.0 168990.0 219220.0 251250.0 202559.0 241930.0 230347.0 169928.0 189067.0 236240.0 187992.0 False True 159615.78782678675 208688.34214407136 267445.97701421374 221810.14645841613 260968.5146065977 228909.3189301188 187105.98057746285 188411.17070556976 193344.77112577023 186326.53713556292 0.8566454906563169 1.1200140642995957 1.4353617102840908 1.1904377651640512 1.4005976744833109 1.2285384704143059 1.004183212192329 1.0111880658657342 1.037666314729507 1.0 17.50747363592742 -6.761182033451753 24.989360642972116 1.0141917059569925 1.2200544154314112 0.2811720612295827 0.1492775954776145 9.29320588013582 902549.8819409877 0.06280321456106554 0.045551690652497555 1.7330774304015193e-07 6.761182033451753 0.20586270947441876 GVDEVTIVNILTNR ddPTM_KYSE-520_SHP099_60min_R1 4 GVDEVTIVNILTNR 14 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YMD9 P07355 ANXA2 Annexin A2;Annexin 0 ;;; 177.83 2.8051999999999997e-07 1953811000.0 377571.0 542801.0 604853.0 534910.0 539574.0 466088.0 410263.0 484356.0 618930.0 464937.0 False True 356626.38396087167 516724.025199088 643842.7921790172 585747.6855734441 582035.4040438979 463178.97190543544 451736.3878210277 482675.8820855397 506547.913955608 460818.0198955121 0.7738985208124776 1.1213190519681766 1.3971736442186113 1.2711041241535197 1.2630482726692658 1.005123393417772 0.9802923677408631 1.047432741877116 1.0992363407803907 1.0 18.813837607678813 -6.27608220019212 24.218909080094324 1.0264987150590834 1.1816237595104444 0.16346204106441464 0.1549187169109195 996.5152246336444 1648209.2390119862 0.058316711592755525 0.051671026126605034 5.295632024227995e-07 6.27608220019212 0.155125044451361 GVDLLLEGVQGES(ph)SPTRR ddPTM_KYSE-520_SHP099_60min_R1 1 GVDLLLEGVQGESSPTRR 18 1 F5H7T0;F6RJM5;Q96S38-2;Q96S38 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 GVDLLLEGVQGES(0.633)S(0.363)PT(0.004)RR 152.13 1.6859e-06 248210000.0 102200.0 100940.0 87842.0 69538.0 77305.0 90506.0 56684.0 68708.0 97498.0 84031.0 True False 96530.76226935086 96090.69088597111 93504.43587216944 76146.87061263797 83388.46369471756 89941.118482504 62414.17190252874 68469.66798456767 79794.82092456965 83286.55071512883 1.1590198110079284 1.1537359881145424 1.1226834953459606 0.9142757138915353 1.0012236426975745 1.079899668196565 0.7493907643745334 0.8220975343157091 0.9580757065747361 1.0 16.345795924562378 -5.236878933098896 0.7418137620929434 0.8936655219927457 1.2104608998950233 0.5166790636091734 0.09164227582193338 0.8236342919177201 0.7730779469337232 0.0477388631551372 0.17740956695735027 5.79590244450666e-06 5.236878933098896 0.3167953779022775 GVDLLLEGVQGESS(ph)PTRR ddPTM_KYSE-520_SHP099_60min_R1 5 GVDLLLEGVQGESSPTRR 18 1 F5H7T0;F6RJM5;Q96S38-2;Q96S38 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 GVDLLLEGVQGES(0.174)S(0.767)PT(0.059)RR;GVDLLLEGVQGES(0.077)S(0.92)PT(0.003)RR;GVDLLLEGVQGES(0.161)S(0.838)PTRR;GVDLLLEGVQGES(0.379)S(0.62)PTRR;GVDLLLEGVQGES(0.411)S(0.588)PT(0.001)RR 226.51 6.949899999999999e-19 3154110000.0 892062.0 880895.0 853389.0 617281.0 706610.0 859399.0 663879.0 725221.0 1035250.0 791345.0 True False 842577.5425784899 838575.4819496489 908399.8204106768 675947.2006477007 762216.1869390651 854035.1720631267 730990.3681546622 722705.3776188544 847274.6965287568 784334.2989570941 1.0742581877381112 1.0691556942807139 1.1581793906227853 0.8618100745389913 0.9718001468921622 1.0888662821436113 0.9319882722541118 0.9214251864030607 1.0802469019337197 1.0 19.58110916532301 -5.2437416767743406 24.9974182545067 0.9784370956790848 1.0973935476108083 0.39497157820633255 0.06863389644096363 881.9674640957593 1245748.3635586502 0.01871249519017877 0.032320186622552136 5.705035132627979e-06 5.2437416767743406 0.11895645193172355 GVEEEEEDGEMRE ddPTM_KYSE-520_SHP099_60min_R1 2 GVEEEEEDGEMRE 13 1 P62306 P62306 SNRPF Small nuclear ribonucleoprotein F 0 ; 206.97 2.1682e-09 932000000.0 510515.0 616258.0 1540177.0 190121.0 587690.0 559145.0 447874.0 427899.0 1066890.0 717622.0 False True 482195.7152635777 586652.0406578836 1639459.2737903313 208190.04267803687 633937.8595013081 555655.168650694 493149.47474901524 426414.7182413777 873169.6701082492 711264.427381467 0.6779415597076746 0.82480160412022 2.3049926450364326 0.2927041402091376 0.8912829534230496 0.7812216487422949 0.6933419636415026 0.5995164411795924 1.2276301702910117 1.0 19.440026485969344 GVEFPMADLDALS(ph)PIHT(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 4 GVEFPMADLDALSPIHTPQR 20 0 Q6ZVM7-2;Q6ZVM7;Q6ZVM7-5 Q6ZVM7-2 TOM1L2 TOM1-like protein 2 2 GVEFPMADLDALS(1)PIHT(1)PQR;GVEFPMADLDALS(1)PIHT(1)PQR;GVEFPMADLDALS(1)PIHT(1)PQR;GVEFPMADLDALS(1)PIHT(1)PQR 175.46 4.0441e-09 507880000.0 662570.0 577670.0 530430.0 565250.0 538673.0 496560.0 531694.0 561480.0 656080.0 515500.0 True False 625815.9212994502 549917.8660996523 564622.3665180069 618971.1900513901 581063.5004698869 493460.7848504205 585442.8183533828 559532.3569304175 536952.410430898 510933.0710529315 1.2248491177323246 1.0763011776990299 1.1050808775294825 1.2114525857091487 1.1372595226071989 0.9658031801180845 1.145830738939841 1.095118692899116 1.0509251423564065 1.0 18.96277479420246 -6.0326376321800295 24.772176273933873 1.0620580625535174 1.1489466057722026 0.3885674314192421 0.06182294331760303 712.7024039124154 540944.3937120672 0.02026609157808632 0.02028225029712367 9.276034769039962e-07 6.0326376321800295 0.08688854321868522 GVEFPMADLDALS(ph)PIHTPQR ddPTM_KYSE-520_SHP099_60min_R1 10 GVEFPMADLDALSPIHTPQR 20 0 Q6ZVM7-2;Q6ZVM7;Q6ZVM7-5 Q6ZVM7-2 TOM1L2 TOM1-like protein 2 1 GVEFPMADLDALS(1)PIHTPQR;GVEFPMADLDALS(1)PIHTPQR;GVEFPMADLDALS(1)PIHTPQR;GVEFPMADLDALS(1)PIHTPQR;GVEFPMADLDALS(1)PIHTPQR;GVEFPMADLDALS(1)PIHTPQR;GVEFPMADLDALS(1)PIHTPQR;GVEFPMADLDALS(1)PIHTPQR;GVEFPMADLDALS(1)PIHTPQR;GVEFPMADLDALS(1)PIHTPQR 424.52 3.2555999999999995e-108 4995462000.0 1924775.0 1891569.0 1625380.0 1350211.0 1443959.0 2157246.0 1741423.0 2210438.0 2494117.0 2205255.0 True False 1818003.893806162 1800695.1859370442 1730154.5954999493 1478534.6474842613 1557590.3582971438 2143781.827524229 1917463.0314906738 2202770.506498105 2041248.2243730617 2185718.15636243 0.8317650144022984 0.8238460117537942 0.7915725961572968 0.6764525623673753 0.7126217777727368 0.9808134782995107 0.8772691144597533 1.007801715004305 0.9339027625456514 1.0 21.059675949916276 -6.266748989227032 24.95379835652698 0.9552770095702442 0.7667025015259468 0.7486028623910568 0.05580323421130568 243.13135295178685 1142650.8320519682 0.020866095699577068 0.018936217900733045 5.41066955040803e-07 6.266748989227032 -0.18857450804429743 GVEICIAT(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 GVEICIATPGR 11 0 P17844-2;P17844;J3KTA4;J3QSF1;J3KRZ1;A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 P17844-2;A0A1X7SBZ2 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 1 GVEICIAT(1)PGR;GVEICIAT(1)PGR 152.23 0.00022764 330750000.0 289860.0 372280.0 290290.0 209194.0 236845.0 326110.0 248370.0 290640.0 328090.0 310850.0 True False 273780.88797841565 354395.1099963278 309002.55788042204 229075.73486353052 255483.35403628967 324074.6265256378 273477.6634576084 289631.8376758859 268517.12647584634 308096.1108376405 0.8886216941657269 1.1502745329462656 1.002942091804785 0.7435203717461014 0.8292326486747621 1.0518621142102558 0.8876375060823951 0.9400697622843904 0.8715368906988529 1.0 18.233020945484434 -5.0208442137046925 24.933079373646404 0.9010323937470928 1.0337381785599775 0.20295489592590576 0.09986103941204613 976.5080504617384 1168065.0869136148 0.026890464149047156 0.04725932598459577 9.531380039874588e-06 5.0208442137046925 0.13270578481288475 GVELCFPENET(ph)PPEGK ddPTM_KYSE-520_SHP099_60min_R1 3 GVELCFPENETPPEGK 16 0 A0A590UJ01;Q13535-2;Q13535-3;Q13535 A0A590UJ01 ATR Serine/threonine-protein kinase ATR 1 GVELCFPENET(1)PPEGK;GVELCFPENET(1)PPEGK;GVELCFPENET(1)PPEGK 194.05 2.4523000000000003e-11 258680000.0 1032440.0 1307190.0 764370.0 601874.0 702870.0 1086560.0 750860.0 846270.0 952350.0 1004460.0 True False 975168.4950818856 1244390.6302678082 813642.5132352423 659075.9239999838 758181.8702167544 1079778.3760010335 826764.2564874177 843334.4868909019 779427.2467898191 995561.2658580558 0.9795163075588381 1.2499387761890184 0.8172701581895906 0.6620144300531203 0.7615622425439498 1.0845925941789152 0.8304504050535202 0.8470945142326801 0.7829023421457093 1.0 19.9251505751439 -4.776475292438846 24.999763296782834 0.8408347526760799 1.1147275417675002 0.408887022977767 0.1279198954242536 195.54793407830354 325132.6017002431 0.03406923701357962 0.07136203559369952 1.6731108190770466e-05 4.776475292438846 0.27389278909142034 GVEPS(ph)PS(ph)PIKPGDIK ddPTM_KYSE-520_SHP099_60min_R1 2 GVEPSPSPIKPGDIK 15 1 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 2 GVEPS(1)PS(1)PIKPGDIK;GVEPS(1)PS(1)PIKPGDIK 84.035 0.0026488 912520000.0 1155210.0 1043720.0 952560.0 992920.0 1084820.0 1156830.0 1134190.0 1093980.0 1156480.0 1136370.0 True False 1091128.1984459579 993578.1245443415 1013963.5417498879 1087286.8182677156 1170189.1622185295 1149609.7948656986 1248844.9938276962 1090185.2387168505 946492.3844883608 1126302.6458824826 0.9687699859668137 0.8821590965595676 0.9002585099633015 0.9653593749802503 1.0389651187418287 1.0206935045996932 1.1088005505387044 0.96793276896075 0.8403535123960962 1.0 20.103163111703473 -5.46801160071483 4.4254480191507835 1.0016356911592958 0.914723338207316 0.2152409475512761 0.06682423813811424 0.32794045061435756 13.308814295307636 0.020594803718262413 0.030278026249460525 3.4039909696379705e-06 5.46801160071483 -0.08691235295197985 GVEPS(ph)PS(ph)PIKPGDIKR ddPTM_KYSE-520_SHP099_60min_R1 1 GVEPSPSPIKPGDIKR 16 2 Q92890;Q92890-1;Q92890-3 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 2 GVEPS(1)PS(1)PIKPGDIKR 57.989 0.035313 498860000.0 636970.0 638530.0 665050.0 500920.0 565830.0 567650.0 555540.0 522490.0 634490.0 546400.0 True False 601636.004331785 607854.0603469295 707920.1871176226 548527.2861929099 610357.6018676934 564107.0857909239 611699.4047479156 520677.6041400827 519282.6101912873 541559.3210927668 1.1109327840905674 1.1224145475335778 1.3071886302116824 1.0128664854038207 1.1270373864789258 1.0416348935748347 1.1295150520419794 0.9614414965464011 0.9588656126229547 1.0 19.046759850237077 -6.7132287872736995 0.6982061927282609 0.9664541440542641 1.1568590481260481 0.43377683489306684 0.07527196393907533 0.6829009721829051 0.6680289343192433 0.06406514087808325 0.04352665335432385 1.9354021213131681e-07 6.7132287872736995 0.190404904071784 GVEPSPS(ph)PIKPGDIK ddPTM_KYSE-520_SHP099_60min_R1 8 GVEPSPSPIKPGDIK 15 1 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.167)PS(0.833)PIKPGDIK;GVEPS(0.052)PS(0.948)PIKPGDIK;GVEPS(0.01)PS(0.99)PIKPGDIK;GVEPS(0.003)PS(0.997)PIKPGDIK;GVEPS(0.006)PS(0.994)PIKPGDIK;GVEPS(0.003)PS(0.997)PIKPGDIK;GVEPS(0.002)PS(0.998)PIKPGDIK;GVEPS(0.003)PS(0.997)PIKPGDIK 160.47 3.7435e-08 19586730000.0 15189880.0 15316660.0 10889610.0 9864380.0 10739620.0 15522310.0 11689820.0 14130830.0 14172380.0 15277530.0 True False 14347267.076124923 14580824.662824621 11591571.684592057 10801887.70936601 11584766.993920999 15425429.505581452 12871541.08724894 14081813.448890517 11599033.048626143 15142182.96993849 0.947503216980557 0.9629275178996104 0.7655152303736258 0.7133639667946694 0.7650658440014912 1.0187057926987995 0.8500452750308581 0.9299724799817103 0.7660079838985898 1.0 23.85206987038593 -6.233421397021614 24.963070512216458 0.904638328766938 0.8280519029640089 0.14321515117439865 0.09921556984713506 1710.2700748808338 1523793.3859889477 0.03484621800369272 0.03483951328874732 5.84222936060842e-07 6.233421397021614 -0.07658642580292907 GVEPSPS(ph)PIKPGDIKR ddPTM_KYSE-520_SHP099_60min_R1 8 GVEPSPSPIKPGDIKR 16 2 Q92890;Q92890-1;Q92890-3 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 GVEPS(0.046)PS(0.954)PIKPGDIKR;GVEPS(0.14)PS(0.86)PIKPGDIKR;GVEPS(0.002)PS(0.998)PIKPGDIKR;GVEPSPS(1)PIKPGDIKR;GVEPS(0.001)PS(0.999)PIKPGDIKR;GVEPS(0.002)PS(0.998)PIKPGDIKR;GVEPS(0.166)PS(0.834)PIKPGDIKR;GVEPS(0.251)PS(0.749)PIKPGDIKR 184.78 3.0446e-12 16337480000.0 20285390.0 19557600.0 18291710.0 14333790.0 16079030.0 16731040.0 14058270.0 14581540.0 20218300.0 16751240.0 True False 19160118.978777584 18618023.539443906 19470822.89437078 15696069.091988906 17344358.183833815 16626615.37329584 15479417.127093412 14530960.041097037 16547166.381866561 16602837.045867508 1.1540268043253843 1.1213760327833842 1.1727407093486544 0.9453847585582189 1.04466231499579 1.0014321845936716 0.9323356655449606 0.8752094597419321 0.9966469186051065 1.0 23.984926450499668 -5.351012618769172 1.0497805031736813 0.9529375349689533 1.166284693063304 0.6666753811451748 0.05400335706408756 0.3461593458950449 0.7379260200704871 0.021341655158653515 0.05463609056833703 4.45643299691351e-06 5.351012618769172 0.21334715809435068 GVFKPWEER ddPTM_KYSE-520_SHP099_60min_R1 2 GVFKPWEER 9 1 Q9GZP4 Q9GZP4 PITHD1 PITH domain-containing protein 1 0 ; 88.49600000000001 0.0048273000000000005 810220000.0 1282950.0 1001570.0 779830.0 776780.0 1224950.0 1078100.0 868570.0 934660.0 884250.0 945620.0 False True 1211782.206002581 953453.0738127801 830099.0895721157 850604.9376525776 1321346.595987897 1071371.1779991093 956373.5320263109 931417.8826112851 723692.4901285222 937242.5424812267 1.2929227505983099 1.017295983266656 0.885682256136749 0.9075611691726163 1.4098235367014018 1.1431098455718778 1.0204119944176215 0.9937853227889959 0.7721507052087512 1.0 19.838062915656334 -7.318917176602614 2.3939773354821043 0.8906045775582464 1.0963030799259776 0.21652482527803685 0.16053070133199035 0.5275525077825142 5.747232872005215 0.11927663839073556 0.04836469563079757 4.7982494632930545e-08 7.318917176602614 0.20569850236773124 GVGDDQLGEES(ph)EERDDHLLPM ddPTM_KYSE-520_SHP099_60min_R1 2 GVGDDQLGEESEERDDHLLPM 21 1 H0YF90;F5GX30;P20645 H0YF90 M6PR Cation-dependent mannose-6-phosphate receptor 1 GVGDDQLGEES(1)EERDDHLLPM;GVGDDQLGEES(1)EERDDHLLPM 60.521 0.015683000000000002 1257190000.0 599690.0 571120.0 506470.0 506610.0 426690.0 510670.0 545580.0 508960.0 616880.0 550470.0 True False 566424.0002476226 543682.5379314024 539117.8665806513 554758.0620821492 460268.0754659985 507482.71910658135 600732.550747682 507194.53655215754 504870.1422793136 545593.2640591799 1.0381799731790369 0.9964978927460325 0.9881314563336943 1.0167978577205732 0.8436102602177172 0.9301484320589691 1.1010629901811273 0.9296202317064213 0.9253599256763384 1.0 19.057466307273227 -4.7732934332558825 1.3087900714994394 0.9605609303803295 1.0340037831495916 0.11551362789771369 0.06423561062948434 1.5336862010373369 4.166636903828595 0.021249550213046475 0.11937852079565531 1.6854138822128385e-05 4.7732934332558825 0.0734428527692621 GVGQADWT(ph)PDLGLR ddPTM_KYSE-520_SHP099_60min_R1 7 GVGQADWTPDLGLR 14 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GVGQADWT(1)PDLGLR;GVGQADWT(1)PDLGLR;GVGQADWT(1)PDLGLR;GVGQADWT(1)PDLGLR;GVGQADWT(1)PDLGLR;GVGQADWT(1)PDLGLR;GVGQADWT(1)PDLGLR 225.7 1.4652000000000002e-13 1921451000.0 2483230.0 2740170.0 2284010.0 1919160.0 1878150.0 2467590.0 1907020.0 2368790.0 2742740.0 2495200.0 True False 2345480.2817037236 2608528.120120975 2431240.9391452125 2101556.3893835046 2025949.7197882899 2452188.8555039642 2099800.1923216507 2360573.2203697427 2244727.5548488605 2473094.4692362254 0.9483989838965136 1.0547628295519889 0.9830764531595355 0.8497679387203255 0.8191962518981215 0.9915467791496386 0.8490578174193805 0.9545018395915814 0.9076594455941296 1.0 21.23788591932114 -5.0870026384266565 6.623414264726876 0.9056954678504469 1.0057778800949575 0.2855665565992661 0.06178889941863453 0.2650703214236458 16.87165821486162 0.016299403824190338 0.028660601864772487 8.184598158110676e-06 5.0870026384266565 0.10008241224451064 GVGS(ph)PEPGPTAPYLGR ddPTM_KYSE-520_SHP099_60min_R1 2 GVGSPEPGPTAPYLGR 16 0 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 GVGS(1)PEPGPTAPYLGR;GVGS(1)PEPGPTAPYLGR 212.03 8.5511e-18 1295820000.0 386010.0 597530.0 456610.0 607540.0 604990.0 712650.0 542930.0 926130.0 1139680.0 709580.0 True False 364597.25580814265 568823.7618891847 486043.8112018312 665280.418936438 652599.2710777723 708202.0870059053 597814.662886175 922917.4711903668 932742.840994826 703293.6732448863 0.5184139566135272 0.8087997710326632 0.6910965215417075 0.9459496711621745 0.9279185863663211 1.0069791808852373 0.8500213859851066 1.3122789331122102 1.326249440992832 1.0 19.4237677134698 -5.36522963794586 0.45266760735798206 1.1935092111240269 0.4761784036674671 0.6528976600928484 0.13954743026228497 1.2923188614342116 0.4105449094336805 0.12148628812574025 0.4539114725010952 4.3129096672078986e-06 5.36522963794586 -0.7173308074565597 GVGS(ph)PPGR ddPTM_KYSE-520_SHP099_60min_R1 2 GVGSPPGR 8 0 O96028-5;O96028-3;O96028;O96028-6;H0Y9L4 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 GVGS(1)PPGR;GVGS(1)PPGR 70.256 0.02273 850820000.0 565460.0 494000.0 462370.0 394070.0 442540.0 487310.0 412470.0 508050.0 574480.0 464120.0 True False 534092.8065834363 470267.49849088286 492175.11001815763 431522.2943185338 477365.3802918351 484268.5175315331 454166.49291927257 506287.6931297616 470168.91346229374 460008.2578798959 1.1610504755827302 1.022302296611522 1.0699266841132669 0.9380751039282439 1.0377321974434446 1.052738748133455 0.9873007389311942 1.1006056618704199 1.0220879851792806 1.0 18.81130023450959 -4.260064800563712 24.39516628245176 1.027458978156191 1.1610505356192025 0.47358232830739433 0.04279035555791053 75.40582752424245 1338050.5420896728 0.010365894251103675 0.06357496026821766 5.494588836336633e-05 4.260064800563712 0.13359155746301155 GVGSGPHPPDTQQPS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 4 GVGSGPHPPDTQQPSPSK 18 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 GVGSGPHPPDT(0.007)QQPS(0.981)PS(0.011)K;GVGSGPHPPDT(0.001)QQPS(0.972)PS(0.027)K;GVGSGPHPPDT(0.002)QQPS(0.997)PSK;GVGSGPHPPDT(0.011)QQPS(0.905)PS(0.083)K 129.43 1.8674e-05 4697150000.0 2348060.0 3162060.0 2310370.0 3223360.0 2174030.0 2773760.0 2226130.0 2633730.0 3103400.0 2842760.0 True False 2217808.431058438 3010149.8912511766 2459300.1469226987 3529707.165261476 2345113.7924613794 2756447.9349659695 2451168.945335126 2624594.205347205 2539900.790347589 2817575.358033812 0.7871336696407264 1.0683476069835267 0.8728427227014335 1.2527463214771335 0.8323162629083574 0.9783049553959404 0.8699568365921629 0.9315080776326511 0.9014491069797003 1.0 21.42602276613082 GVHIHQAGGS(ph)PPASSTSSSSLTNDVAK ddPTM_KYSE-520_SHP099_60min_R1 3 GVHIHQAGGSPPASSTSSSSLTNDVAK 27 0 I3L436;Q8N122-3;Q8N122 I3L436 RPTOR Regulatory-associated protein of mTOR 1 GVHIHQAGGS(0.854)PPAS(0.019)S(0.019)T(0.094)S(0.012)S(0.002)SSLTNDVAK;GVHIHQAGGS(0.988)PPASST(0.01)S(0.001)SSSLTNDVAK;GVHIHQAGGS(0.991)PPAS(0.005)S(0.001)T(0.003)SSSSLTNDVAK 252.85 1.0642999999999998e-31 4532800000.0 747950.0 1083290.0 1020800.0 1989200.0 642250.0 753180.0 753970.0 724860.0 953340.0 713300.0 True False 706459.7224986396 1031247.1223485603 1086602.4013377472 2178252.969925214 692791.4210973722 748479.1242420656 830188.6456380931 722345.6298435961 780237.4877456895 706980.7169390027 0.9992630712155505 1.4586637197313188 1.5369618651586188 3.081064189920686 0.9799297272165136 1.0586980752215385 1.1742733935269702 1.0217331428374998 1.1036191922233252 1.0 19.431311340170407 GVIS(ph)TPVIR ddPTM_KYSE-520_SHP099_60min_R1 4 GVISTPVIR 9 0 A0A0C4DG79;Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A494C0Y9 A0A0C4DG79 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 GVIS(0.5)T(0.5)PVIR;GVIS(0.5)T(0.5)PVIR;GVIS(0.5)T(0.5)PVIR;GVIS(0.5)T(0.5)PVIR 95.311 0.0032872 1527650000.0 4997830.0 5626780.0 4501240.0 4072860.0 3464560.0 4742250.0 4067570.0 5339120.0 6449670.0 5440390.0 True False 4720590.406972904 5356461.042831027 4791397.132638643 4459943.38984999 3737201.161350119 4712651.858701684 4478759.671257651 5320599.838879977 5278572.510949653 5392192.377159374 0.8754491822229324 0.9933735052777976 0.8885805248593092 0.8271113265064003 0.6930763778348149 0.873976952058288 0.8306008684387997 0.9867229258023781 0.9789288181387964 1.0 22.362440537769544 -7.2682472667553135 23.892186893932173 0.9871194330170776 0.8547163413747849 0.43529113006403164 0.06991254489116384 328.7025034882254 1153562.4911105253 0.0415744403298656 0.020715551848746953 5.392035380893376e-08 7.2682472667553135 -0.1324030916422927 GVIVDKDFSHPQMPK ddPTM_KYSE-520_SHP099_60min_R1 2 GVIVDKDFSHPQMPK 15 1 B7ZAR1;E9PCA1;P48643;E7ENZ3;P48643-2 B7ZAR1 CCT5 T-complex protein 1 subunit epsilon 0 ; 122.33 0.00010779 3198800000.0 6976100.0 5878500.0 4463100.0 3754000.0 6172100.0 6025700.0 4225500.0 5636800.0 4899800.0 5437800.0 False True 6589121.826489416 5596088.036191606 4750798.567212481 4110779.0313187432 6657809.1555548385 5988091.37118008 4652654.77690592 5617247.256439004 4010119.8339064033 5389625.322544388 1.2225565660246598 1.0383074335025853 0.8814710268152142 0.7627207431514156 1.2353009267092716 1.1110403808836868 0.8632612655733644 1.042233350237259 0.7440442691131758 1.0 22.361753552117243 -6.770053438062379 24.99737086586227 0.9159041693969846 1.0305450650854642 0.14389116108583355 0.1531745314965398 469.66203046089635 1362910.4157571483 0.06647274754260651 0.045614809668640524 1.6980347037621978e-07 6.770053438062379 0.11464089568847957 GVKPVFSIGDEEEYDT(ph)DEIDS(ph)SSMSDDDRK ddPTM_KYSE-520_SHP099_60min_R1 2 GVKPVFSIGDEEEYDTDEIDSSSMSDDDRK 30 2 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 2 GVKPVFSIGDEEEY(0.003)DT(0.997)DEIDS(0.396)S(0.333)S(0.199)MS(0.073)DDDRK;GVKPVFSIGDEEEYDT(1)DEIDS(0.53)S(0.293)S(0.163)MS(0.014)DDDRK 226.59 3.3425e-22 1559400000.0 566980.0 542840.0 511490.0 604780.0 556630.0 577650.0 565740.0 629980.0 627190.0 601500.0 True False 535528.4891533911 516761.1515805486 544461.4638129359 662258.1093662633 600433.6142085324 574044.6720816127 622930.520290323 627794.7464184378 513308.1061732628 596171.1779599192 0.898279737349857 0.8667999572688008 0.9132636463172666 1.1108522750671908 1.0071496852014872 0.9628856497994037 1.0448853338096173 1.0530444436558197 0.8610079204596716 1.0 19.185367104010428 -5.022942948331873 22.531421436348054 1.008136842454572 0.8844127704648117 0.41736931672194577 0.061791489003926274 186.22826537390202 182889.42830456852 0.016447237586821133 0.02882873770807286 9.48543061728611e-06 5.022942948331873 -0.12372407198976032 GVKPVFSIGDEEEYDT(ph)DEIDSS(ph)SMSDDDRK ddPTM_KYSE-520_SHP099_60min_R1 1 GVKPVFSIGDEEEYDTDEIDSSSMSDDDRK 30 2 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 2 GVKPVFSIGDEEEY(0.002)DT(0.998)DEIDS(0.226)S(0.706)S(0.046)MS(0.022)DDDRK 248.96 1.0009e-30 1202600000.0 684390.0 701400.0 500390.0 607970.0 652340.0 619870.0 703410.0 702090.0 679900.0 662620.0 True False 646425.5224023595 667703.6911771359 532645.9400523083 665751.2860071545 703675.4466931252 616001.1614008979 774517.5474200441 699654.6136590374 556447.2988842322 656749.7023105586 0.9842798864287614 1.0166790922447917 0.8110333939678511 1.0137062623171762 1.0714514893839673 0.9379542301027312 1.1793192211510075 1.0653291675619065 0.8472745353771074 1.0 19.324984115855592 -5.491666364840464 24.973432594960247 1.0259884953022265 0.9397829816442588 0.12079229984738316 0.09589496322097263 1324.135120620989 1059457.3405701963 0.02709990202105873 0.040147723794537724 3.223544242252122e-06 5.491666364840464 -0.08620551365796769 GVKPVFSIGDEEEYDT(ph)DEIDSSSMS(ph)DDDRK ddPTM_KYSE-520_SHP099_60min_R1 1 GVKPVFSIGDEEEYDTDEIDSSSMSDDDRK 30 2 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 2 GVKPVFSIGDEEEY(0.003)DT(0.997)DEIDS(0.369)S(0.036)S(0.167)MS(0.428)DDDRK 233.04 3.0261e-30 1163100000.0 701920.0 541820.0 531550.0 732120.0 677500.0 759600.0 632580.0 789660.0 790680.0 706530.0 True False 662983.0983571708 515790.1539115996 565814.5635100713 801700.4646800951 730815.395552307 754859.0546406861 696527.3597858592 786920.8537680298 647112.4434207749 700270.6938720216 0.9467525974724492 0.7365582458686514 0.8079940635263497 1.1448436607381578 1.0436184206301622 1.0779532275823624 0.9946544470318124 1.1237380925037597 0.924088997417102 1.0 19.417553186803588 -5.24808526773164 24.927459792189666 1.0486106130308506 0.8210472699583392 0.6153865430442087 0.07725371304438819 445.03379249088164 830721.2071464033 0.019803892361261753 0.034049693876594664 5.64826068116885e-06 5.24808526773164 -0.22756334307251136 GVLDLDRPGEPAGEES(ph)PGPLQER ddPTM_KYSE-520_SHP099_60min_R1 3 GVLDLDRPGEPAGEESPGPLQER 23 1 A0A669KBI7;Q9UMN6 A0A669KBI7 KMT2B Histone-lysine N-methyltransferase 2B 1 GVLDLDRPGEPAGEES(1)PGPLQER;GVLDLDRPGEPAGEES(1)PGPLQER;GVLDLDRPGEPAGEES(1)PGPLQER 178.51 3.7338e-11 576690000.0 438070.0 445980.0 377518.0 350515.0 394488.0 435950.0 383058.0 444060.0 519370.0 447350.0 True False 413769.3838291054 424554.4513703728 401853.4143301564 383827.8402138228 425531.96127031505 433229.07434255787 421781.2409258148 442519.65950438275 425065.50025224837 443386.8270330332 0.9332017971708455 0.9575260821601781 0.906326913271642 0.8656726289823374 0.9597307256911629 0.977090540198393 0.9512714749515805 0.9980442190074676 0.9586786849230867 1.0 18.758206382990192 -5.981669547671584 24.945907950210906 0.9745217678535945 0.9173398949398767 0.5580621273742299 0.025802995431140657 195.22007308852153 265673.5592250377 0.008366726701888634 0.009485419933413312 1.0431108249093037e-06 5.981669547671584 -0.05718187291371779 GVLEGDDVLFYDES(ph)PPPRPK ddPTM_KYSE-520_SHP099_60min_R1 3 GVLEGDDVLFYDESPPPRPK 20 1 Q5T670;Q7L590-2;Q7L590 Q5T670 MCM10 Protein MCM10 homolog 1 GVLEGDDVLFYDES(1)PPPRPK;GVLEGDDVLFYDES(1)PPPRPK;GVLEGDDVLFYDES(1)PPPRPK 213.2 6.8693e-19 1487520000.0 198906.0 200108.0 178245.0 154546.0 128473.0 185616.0 177511.0 175868.0 188914.0 182481.0 True False 187872.2876707194 190494.51131176826 189734.9579020834 169234.00537405096 138583.09418862237 184457.5016932406 195455.54422041087 175257.95495589974 154611.97973439613 180864.3603080697 1.0387468672695548 1.0532451555812066 1.0490455807816657 0.9356957063613387 0.766226657106857 1.0198664976286684 1.0806747326421178 0.9690021553023467 0.8548504496465893 1.0 17.464548624394823 -5.258067392518249 23.833449215060003 0.946446607964533 1.0476358102982444 0.23768690593759767 0.08239024440882761 247.41322174323614 1748716.5627722777 0.02453295562733645 0.04033178611217235 5.519917762022435e-06 5.258067392518249 0.10118920233371143 GVLGKS(ph)PLSALAR ddPTM_KYSE-520_SHP099_60min_R1 2 GVLGKSPLSALAR 13 1 I3L1L3;Q9BQG0;Q9BQG0-2;I3L2H8 I3L1L3 MYBBP1A Myb-binding protein 1A 1 GVLGKS(0.991)PLS(0.009)ALAR;GVLGKS(0.991)PLS(0.009)ALAR 140.68 7.7577e-06 404480000.0 888110.0 1011250.0 930750.0 554230.0 668450.0 694040.0 569760.0 628730.0 1062040.0 707040.0 True False 838844.7678966082 962668.0320828035 990747.6342526553 606903.8525646746 721053.2120397631 689708.2389189346 627356.9011217415 626549.0823766852 869200.3078496994 700776.1756687964 1.1970223832110787 1.3737168378534939 1.4137861255159256 0.8660452133457115 1.0289351109169986 0.9842061743333398 0.8952314917427293 0.8940787431575119 1.2403394093986784 1.0 19.41859420281663 -5.258148898735622 24.999971457542614 0.9803733286368292 1.3327293008970826 0.6617501859743615 0.11170224107418754 164.84632151811365 1252440.7277090242 0.030256162926899047 0.049751515434138686 5.518881908655247e-06 5.258148898735622 0.3523559722602534 GVLNS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 1 GVLNSPVK 8 0 P53992;G5EA31;P53992-2 P53992 SEC24C Protein transport protein Sec24C 1 GVLNS(1)PVK 89.171 0.009904999999999999 0.0 451440.0 508910.0 380590.0 322960.0 377780.0 439890.0 364090.0 432140.0 491900.0 425610.0 True False 426397.7232766711 484461.199710517 405123.4403655303 353654.0212985351 407509.13672583096 437144.48334108957 400895.7703759737 430641.0072022339 402583.3597899009 421839.4265195691 1.0108057627394165 1.148449313302968 0.9603735803171463 0.8383617060557735 0.9660290411639051 1.0362817125648887 0.9503515915608144 1.020864765428123 0.9543521408405505 1.0 18.68633441495974 -4.7837728766693015 24.832250909501056 0.963990410796834 1.0796275259586183 0.3695155443839975 0.05942139343438914 197.8996615246333 220041.2758600733 0.01599384317903525 0.03333390297567386 1.6452319065089464e-05 4.7837728766693015 0.11563711516178432 GVMAVTAVTATAAS(ph)DR ddPTM_KYSE-520_SHP099_60min_R1 1 GVMAVTAVTATAASDR 16 0 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 GVMAVTAVTATAAS(1)DR 193.64 1.682e-09 0.0 379850.0 366690.0 310100.0 548890.0 387270.0 361810.0 343770.0 436010.0 431700.0 392520.0 True False 358778.9632877983 349073.66198708833 330089.54217754287 601056.3405702044 417745.945735118 359551.80958339537 378521.6264718852 434497.58307549864 353314.1622713971 389042.5781759388 0.9222100186821859 0.8972633885569843 0.8484663651089231 1.544962876270025 1.0737795017032776 0.9241965526477499 0.9729568116852864 1.1168381237670173 0.908163224518875 1.0 18.56956853186356 GVPAGNS(ph)DTEGGQPGR ddPTM_KYSE-520_SHP099_60min_R1 6 GVPAGNSDTEGGQPGR 16 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 GVPAGNS(0.997)DT(0.003)EGGQPGR;GVPAGNS(0.999)DT(0.001)EGGQPGR;GVPAGNS(0.986)DT(0.014)EGGQPGR;GVPAGNS(0.999)DT(0.001)EGGQPGR;GVPAGNS(0.986)DT(0.014)EGGQPGR;GVPAGNS(1)DTEGGQPGR 255.42 3.7014e-24 3757180000.0 1861140.0 1964150.0 1765660.0 1456880.0 1496520.0 1793600.0 1594440.0 1763670.0 2176440.0 1717410.0 True False 1757898.854109392 1869789.2857507458 1879477.268755886 1595341.4371730573 1614287.6099659628 1782405.477097861 1755621.5554348303 1757552.2404136716 1781253.3595875842 1702195.0835247615 1.0327246689429297 1.0984576937438595 1.1041491583115277 0.9372259693463333 0.9483564049681266 1.0471217396580694 1.03138680896636 1.0325210414626984 1.0464448974315654 1.0 20.69896495881883 -5.234713733254155 24.999348853310234 1.0078565137522963 1.0804452311669588 0.40694770447805484 0.03993379387734803 827.0867403643308 773661.1994903754 0.011830395612731824 0.020480242382514 5.824870396533225e-06 5.234713733254155 0.07258871741466244 GVPEKS(ph)PVLEK ddPTM_KYSE-520_SHP099_60min_R1 13 GVPEKSPVLEK 11 1 E9PDI4;O00515;A0A0J9YYF6 E9PDI4 LAD1 Ladinin-1 1 GVPEKS(1)PVLEK;GVPEKS(1)PVLEK;GVPEKS(1)PVLEK;GVPEKS(1)PVLEK;GVPEKS(1)PVLEK;GVPEKS(1)PVLEK;GVPEKS(1)PVLEK;GVPEKS(1)PVLEK;GVPEKS(1)PVLEK;GVPEKS(1)PVLEK;GVPEKS(1)PVLEK;GVPEKS(1)PVLEK;GVPEKS(1)PVLEK 142.91 5.5622e-05 128917990000.0 87782250.0 76920750.0 71971390.0 64811610.0 67638960.0 69086810.0 69368730.0 73980420.0 89258880.0 71610180.0 True False 82912793.60292295 73225361.70960042 76610780.95769562 70971285.92807889 72961761.33896197 68655613.5923391 76381198.20196363 73723799.19017975 73051717.42525645 70975769.51707707 1.1681844968651418 1.0316952138431141 1.0793934532722853 0.9999368293006375 1.027981265090857 0.9673105914803821 1.0761587894244105 1.038717856696735 1.0292486847596614 1.0 26.080823249900586 GVPGCCYSS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 4 GVPGCCYSSLPR 12 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 GVPGCCYS(0.018)S(0.982)LPR;GVPGCCYS(0.034)S(0.966)LPR;GVPGCCYS(0.008)S(0.992)LPR;GVPGCCYS(0.029)S(0.971)LPR 124.12 0.00010399 3493660000.0 4111870.0 3692640.0 3947910.0 3121370.0 3075850.0 3409870.0 2898690.0 3270890.0 3734710.0 3498820.0 True False 3883776.3742903727 3515240.0316343624 4202398.5954793375 3418024.0663258913 3317901.8958074744 3388587.7365029426 3191717.8736881875 3259544.0460214685 3056580.808377601 3467823.1768407677 1.1199464840732 1.0136733773250781 1.2118260883496885 0.9856396627003791 0.9567678992301235 0.9771512455228442 0.9203808011329702 0.939939518193934 0.8814119557163195 1.0 21.72559890721535 -5.45700270004427 6.853483708992977 0.9455303088993221 1.1050854471875768 0.6645368993418402 0.05372663951925579 0.1500853469537353 13.15239547409366 0.014724273496237802 0.021781935438745872 3.491381448514724e-06 5.45700270004427 0.15955513828825474 GVQKPAGPST(ph)SPDGNSR ddPTM_KYSE-520_SHP099_60min_R1 2 GVQKPAGPSTSPDGNSR 17 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GVQKPAGPS(0.029)T(0.486)S(0.486)PDGNSR;GVQKPAGPS(0.009)T(0.495)S(0.495)PDGNSR 181.94 8.320299999999999e-09 1018360000.0 906320.0 837700.0 784110.0 701040.0 758250.0 797660.0 694940.0 713700.0 929950.0 783460.0 True False 856044.6228958714 797455.6345866658 834654.9852203574 767666.6308246393 817919.9611476565 792681.5080630459 765191.3171608106 711224.3412788319 761094.522131772 776519.1539226575 1.102412759004699 1.0269619629577014 1.07486722124499 0.9885997363319388 1.0533158866923746 1.0208138512214964 0.9854120317514085 0.9159134551749525 0.9801361863220417 1.0 19.566661985563776 -6.7371362917434015 2.44202090279213 0.9597189366011781 1.0457328374436166 0.5364431364964095 0.03451639838693955 0.21326520035190732 2.600521815234595 0.015501423186924972 0.010465400606624363 1.8317394895637677e-07 6.7371362917434015 0.08601390084243843 GVQKPAGPSTS(ph)PDGNSR ddPTM_KYSE-520_SHP099_60min_R1 3 GVQKPAGPSTSPDGNSR 17 1 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 GVQKPAGPS(0.005)T(0.114)S(0.881)PDGNSR;GVQKPAGPS(0.046)T(0.137)S(0.818)PDGNSR;GVQKPAGPST(0.091)S(0.826)PDGNS(0.083)R 163.56 6.4406e-08 1573540000.0 1542550.0 1412900.0 1257530.0 1208380.0 1325750.0 1313350.0 1260120.0 1287950.0 1597270.0 1290960.0 True False 1456981.676502811 1345022.163193862 1338592.3959191414 1323224.0718873038 1430078.982514351 1305152.8954875548 1387505.227186057 1283482.40205979 1307246.0319000103 1279523.0987516819 1.1386911873058485 1.0511902165002585 1.046165088559236 1.0341541103699161 1.1176656239418836 1.020030741735634 1.0843924807138876 1.0030943586028036 1.0216666140496997 1.0 20.287174761370313 -1.0000000067775663 0.11151719601806884 0.972850281751805 1.3495118461651454 0.40020854225653635 0.03486526807771096 119.908278861409 0.9333448307067543 0.3082554548443357 6.959416414934338 0.0999999984394077 1.0000000067775663 0.3766615644133404 GVQVETIS(ph)PGDGR ddPTM_KYSE-520_SHP099_60min_R1 2 GVQVETISPGDGR 13 0 Q1JUQ3;A0A087WTS4;A0A087WV48;A0A087WZM5;P62942 Q1JUQ3 FKBP12-Exin;FKBP1A Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase FKBP1A 1 GVQVETIS(1)PGDGR;GVQVET(0.002)IS(0.998)PGDGR 118.52 0.00011139 960480000.0 1338610.0 1229960.0 1029130.0 933620.0 1006350.0 1185530.0 956170.0 1107720.0 1279580.0 1144690.0 True False 1264354.6348471208 1170870.8753924004 1095469.3664662186 1022350.9640969115 1085544.0196517557 1178130.6675199748 1052828.994919924 1103877.5778637922 1047240.527586831 1134548.937155343 1.1144117220868763 1.0320144306230876 0.9655549713112345 0.9011078593579703 0.9568066956843154 1.0384132662218206 0.927971425859941 0.9729660323260687 0.9230457085549607 1.0 20.11368740827595 -4.476854411970129 2.318061844393009 0.9588437041210391 1.1210973526666386 0.6287335818463691 0.03728829004956918 0.24955358044275464 2.167949846619935 0.010142055066904646 0.06771131745816703 3.33538205645628e-05 4.476854411970129 0.16225364854559943 GVS(ph)MPNMLEPK ddPTM_KYSE-520_SHP099_60min_R1 7 GVSMPNMLEPK 11 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;O14639-3;O14639-5 F8W8M4;J3QSX6 ABLIM1 Actin-binding LIM protein 1 1 GVS(1)MPNMLEPK;GVS(1)MPNMLEPK;GVS(1)MPNMLEPK;GVS(1)MPNMLEPK;GVS(1)MPNMLEPK;GVS(1)MPNMLEPK;GVS(1)MPNMLEPK 177.21 6.4514e-06 6894550000.0 10454290.0 9712780.0 8064560.0 6694130.0 7194670.0 8073380.0 6819800.0 8311950.0 9582260.0 8781820.0 True False 9874369.693589557 9246163.469619986 8584414.441352231 7330338.102536429 7760849.596927412 8022991.040751749 7509211.938833993 8283117.785473706 7842363.133117257 8704019.906952575 1.1344608352402932 1.0622865720050063 0.9862585946632768 0.8421784624689472 0.8916396883155358 0.9217569728147295 0.8627291779096006 0.951642789656 0.9010047330949869 1.0 23.053250425502146 -4.792768257127994 2.2411001336119036 0.9060794824261313 1.1209495516576005 0.7476826350990031 0.04379231103362029 0.14166677407400508 1.3829366192453216 0.01165645544571658 0.03920366439597606 1.6115053174090908e-05 4.792768257127994 0.21487006923146912 GVS(ph)RS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 5 GVSRSPPK 8 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 2 GVS(1)RS(1)PPK;GVS(1)RS(1)PPK;GVS(1)RS(1)PPK;GVS(1)RS(1)PPK;GVS(1)RS(1)PPK 79.82 0.037212 15411800000.0 10484940.0 9684140.0 9130560.0 9385940.0 9560890.0 8976040.0 9010860.0 9284470.0 10981040.0 9278540.0 True False 9903319.476990292 9218899.378209518 9719130.50701253 10277976.91561424 10313277.648977268 8920017.204867024 9921765.666318895 9252264.34058158 8987159.945491549 9196339.354194883 1.0768762542970884 1.0024531526236409 1.0568477448126332 1.117616099162975 1.1214546627482702 0.9699530281903075 1.078882072984085 1.0060812225639744 0.9772540572235497 1.0 23.132628273264224 -7.400296427898186 4.482526829251302 0.9892993292255621 1.0591485337789288 0.3236366128440932 0.04414529533356315 0.2937376485053629 9.295498027776336 0.027351091926623744 0.012257917440551089 3.978355350343212e-08 7.400296427898186 0.06984920455336674 GVSAVAGPHDIGAS(ph)PGDKK ddPTM_KYSE-520_SHP099_60min_R1 1 GVSAVAGPHDIGASPGDKK 19 1 Q8IYB7;Q8IYB7-4;Q8IYB7-5;Q8IYB7-3;Q8IYB7-2;C9JGP4 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 GVSAVAGPHDIGAS(1)PGDKK 178.35 1.7172e-09 972970000.0 1268000.0 1246300.0 1105200.0 1396100.0 1021800.0 1024200.0 1015400.0 940670.0 1242500.0 849050.0 True False 1197661.512304666 1186425.8772655604 1176442.9603825242 1528784.9242472285 1102209.8467532804 1017807.587892299 1118046.5413490178 937407.0353240287 1016893.320876096 841528.0775509047 1.4231985173806854 1.4098470495701227 1.3979842048839544 1.8166772625061356 1.3097719210522798 1.2094754946910622 1.328590894557985 1.1139343538627493 1.2083890579569918 1.0 19.682651882257847 -5.990496855843642 24.972986836236124 1.1968300824608606 1.5048376319435244 0.574730659435047 0.13697371170475314 161.37433723158725 424067.01694293896 0.04280100603121047 0.04847277093201934 1.0221229604241663e-06 5.990496855843642 0.30800754948266373 GVSMS(ph)LPS(ph)SPLLPR ddPTM_KYSE-520_SHP099_60min_R1 7 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 2 GVS(0.004)MS(0.996)LPS(0.589)S(0.411)PLLPR;GVS(0.001)MS(0.999)LPS(0.945)S(0.056)PLLPR;GVSMS(0.999)LPS(0.579)S(0.421)PLLPR;GVS(0.449)MS(0.551)LPS(0.551)S(0.449)PLLPR;GVS(0.002)MS(0.998)LPS(0.5)S(0.5)PLLPR;GVS(0.106)MS(0.893)LPS(0.554)S(0.447)PLLPR;GVS(0.013)MS(0.987)LPS(0.695)S(0.305)PLLPR 166.9 4.2168e-06 4042530000.0 4558880.0 4574320.0 5662000.0 5487870.0 4536070.0 4766820.0 3842860.0 3843430.0 5261150.0 4144600.0 True False 4305989.83849803 4354562.801005698 6026981.579520302 6009435.514811714 4893032.902292188 4737068.508217903 4231333.791499394 3830098.038393308 4305857.782798612 4107882.068450005 1.0482262554637494 1.0600505877348059 1.4671749283675068 1.4629036118067547 1.1911327591102046 1.1531656530746766 1.030052401941512 0.932377798235695 1.0481941085575779 1.0 21.96996333381754 -6.583145905256849 2.0391145363832526 0.9907695031315163 1.2601754949267294 0.4241043519714972 0.13407283898745573 0.347858335414727 2.9327632657603693 0.06894782282601451 0.050581553706280244 2.6112839219780316e-07 6.583145905256849 0.2694059917952131 GVSMS(ph)LPSS(ph)PLLPR ddPTM_KYSE-520_SHP099_60min_R1 4 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 2 GVSMS(1)LPS(0.41)S(0.59)PLLPR;GVSMS(0.999)LPS(0.012)S(0.989)PLLPR;GVSMS(0.995)LPS(0.069)S(0.936)PLLPR;GVS(0.004)MS(0.995)LPS(0.469)S(0.533)PLLPR 205.3 1.3831e-11 4022070000.0 6426480.0 6708240.0 8149720.0 7652990.0 6667770.0 6860000.0 5199360.0 5585730.0 7572320.0 5960780.0 True False 6069990.343529738 6385966.081126485 8675063.99121304 8380327.86864465 7192485.564578316 6817184.195412212 5724962.049663604 5566354.406349177 6197377.570653107 5907972.1266166605 1.0274236596654123 1.0809066028521632 1.4683657616003378 1.4184778954676351 1.2174203619165114 1.1538957952593174 0.9690231989875921 0.9421768226142395 1.0489855804722934 1.0 22.494231588912527 -6.567831344441793 2.6808050198964284 0.9841908465089905 1.2548313023481785 0.46299145075589054 0.12765172305001599 0.2725831037572389 3.977404263692592 0.060117241445531065 0.045905733317889344 2.705008633424756e-07 6.567831344441793 0.27064045583918805 GVSMSLPS(ph)SPLLPR ddPTM_KYSE-520_SHP099_60min_R1 2 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GVSMS(0.022)LPS(0.706)S(0.272)PLLPR;GVSMS(0.061)LPS(0.691)S(0.248)PLLPR 112.44 0.0028030999999999998 986580000.0 1232330.0 1545110.0 1549490.0 1022300.0 976530.0 1434940.0 1074500.0 1275980.0 1752470.0 1422480.0 True False 1163970.1983110507 1470880.5963426055 1649372.604671657 1119459.0846342973 1053377.3553043457 1425984.0071960334 1183120.946109433 1271553.9231959714 1434265.6241736307 1409877.9338726935 0.8255822510207134 1.0432680454132282 1.1698690823120501 0.7940113521454547 0.7471408197806872 1.011423736010322 0.8391655175846339 0.9018893711622469 1.0172977317503995 1.0 20.427138829948394 -5.278143325183256 24.9938322564225 0.8930168834221882 1.01594264576485 0.15822076661898143 0.11646846744442048 1359.7436332338664 2034558.1783277022 0.03336452590918109 0.049623757645442496 5.270558945592017e-06 5.278143325183256 0.12292576234266173 GVSMSLPSS(ph)PLLPR ddPTM_KYSE-520_SHP099_60min_R1 4 GVSMSLPSSPLLPR 14 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 GVSMSLPS(0.333)S(0.667)PLLPR;GVSMSLPS(0.016)S(0.984)PLLPR;GVSMSLPS(0.016)S(0.984)PLLPR;GVSMSLPS(0.045)S(0.954)PLLPR 244.44 1.4983000000000001e-18 10519680000.0 7738310.0 10423890.0 7594910.0 6746340.0 6361740.0 9824140.0 6570930.0 7670190.0 9456690.0 8417400.0 True False 7309050.518361452 9923110.677822132 8084490.050885657 7387510.125238919 6862372.744650835 9762823.898180293 7235183.730496847 7643583.901125811 7739593.479755155 8342828.384638103 0.8760878423221342 1.1894180510885073 0.969034682023649 0.8854922796736129 0.8225475136569662 1.1702055283981234 0.8672339159965469 0.9161861599838453 0.9276941970910366 1.0 22.992105138213326 -4.984349501057497 24.982375143565985 0.9384145526595558 1.044371314330512 0.08988704246136425 0.1134809916943023 475.55730499257214 759106.6379125381 0.028677161606689393 0.05966770444007114 1.036693794556297e-05 4.984349501057497 0.10595676167095625 GVSSES(ph)SGDREK ddPTM_KYSE-520_SHP099_60min_R1 2 GVSSESSGDREK 12 1 Q13435;E9PPJ0;H0YCG1;E9PJ04 Q13435 SF3B2 Splicing factor 3B subunit 2 1 GVS(0.022)S(0.022)ES(0.887)S(0.07)GDREK;GVS(0.015)S(0.015)ES(0.947)S(0.024)GDREK 61.211999999999996 0.031588 356530000.0 1291570.0 1207940.0 1174650.0 1159790.0 1188660.0 1196800.0 1105790.0 1195010.0 1518600.0 1165260.0 True False 1219924.0374190386 1149908.7492450948 1250369.8185064516 1270016.0928964205 1282200.7794497516 1189330.327269582 1217574.0446704072 1190864.7892274314 1242860.5207906966 1154936.7029585624 1.056269174140886 0.9956465547414091 1.0826306024420398 1.09964129604944 1.110191386389558 1.0297796617103905 1.0542344368755352 1.0311082730134329 1.0761286896562408 1.0 20.139382355311724 -9.093473318860408 10.860610026937696 1.0000024078988374 1.0591212481258458 0.22784173937050123 0.03286135045621871 0.0 0.0 0.03394506065218438 0.008232886502173775 8.063557387770519e-10 9.093473318860408 0.05911884022700842 GVT(ph)PAGFPK ddPTM_KYSE-520_SHP099_60min_R1 4 GVTPAGFPK 9 0 Q8WX93-3;Q8WX93;Q8WX93-4;A0A3B3ISX8 Q8WX93-3 PALLD Palladin 1 GVT(1)PAGFPK;GVT(1)PAGFPK;GVT(1)PAGFPK;GVT(1)PAGFPK 103.34 0.009303299999999999 1054300000.0 2180990.0 2478070.0 1850070.0 1565180.0 1542990.0 2175210.0 1651030.0 2190250.0 2568200.0 2392200.0 True False 2060006.137004222 2359019.797541096 1969328.4724166603 1713934.2366114717 1664414.5345878315 2161633.7075368175 1817932.2249000082 2182652.5339581906 2101879.619053518 2371006.9691034374 0.8688317511707627 0.9949442697897787 0.830587382525212 0.7228718679218271 0.7019863527508762 0.9116943710858043 0.7667342393293063 0.9205593076698251 0.8864923833810214 1.0 21.177068472665475 -7.9659379358608 1.2010254222501748 0.9958501130581 0.8298895383036844 0.26519050939254385 0.08497344130185838 0.7138793727348743 2.3201073145324007 0.08745948200166499 0.027589989437055304 1.0815885078630845e-08 7.9659379358608 -0.1659605747544156 GVTDHTQR ddPTM_KYSE-520_SHP099_60min_R1 1 GVTDHTQR 8 0 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8Y5T0;A0A2R8Y542 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 72.23 0.034542 192390000.0 228590.0 164100.0 143540.0 126230.0 176330.0 177530.0 150030.0 159010.0 226150.0 154030.0 False True 215909.6570171323 156216.38968087843 152792.81807212014 138226.86124756653 190206.16781954028 176421.96941859007 165196.49655169697 158458.4314232129 185086.86077756915 152665.4140335265 1.4142669993985466 1.0232598566599513 1.000834531117609 0.9054235507278082 1.2459021516017343 1.1556119015918462 1.0820820000227331 1.037945840099803 1.2123692975864373 1.0 17.220013734646827 -10.155607196043867 10.716278654279742 1.0000243208208475 1.1083573689758173 0.057844312272892884 0.138269230928278 3.9142657022541187e-10 0.0 0.13338472258445486 0.03235054706231865 6.98864216205811e-11 10.155607196043867 0.1083330481549698 GVTDTREPS(ph)PGSHSALPGKK ddPTM_KYSE-520_SHP099_60min_R1 2 GVTDTREPSPGSHSALPGKK 20 2 Q9P209 Q9P209 CEP72 Centrosomal protein of 72 kDa 1 GVTDT(0.005)REPS(0.485)PGS(0.485)HS(0.024)ALPGKK;GVTDTREPS(0.968)PGS(0.031)HSALPGKK 148.29 8.273299999999999e-07 1514080000.0 1457380.0 1393590.0 1503320.0 1204090.0 1225030.0 1257810.0 1209670.0 1206160.0 1828480.0 1193010.0 True False 1376536.2261849956 1326639.8445787644 1600226.4125970437 1318526.3515771397 1321432.8915327585 1249959.5412290692 1331955.2488415078 1201976.1124798616 1496474.1242297983 1182440.8595477352 1.1641480544840939 1.1219502724949668 1.3533246924578577 1.1150886244589475 1.1175467093028106 1.0571011066948066 1.1264455537767526 1.016521124734812 1.2655805253568249 1.0 20.173336597480077 -5.491693670068287 24.746112874866668 1.0991948836028127 1.2090527378170377 0.25946477578287375 0.08810658241758856 817.4132741836436 648636.68467076 0.023704158711638553 0.03511147824926375 3.2233415759815476e-06 5.491693670068287 0.109857854214225 GVTEAIQNFS(ph)FR ddPTM_KYSE-520_SHP099_60min_R1 2 GVTEAIQNFSFR 12 0 E3W994;J3KR49;O75122;A0A0U1RQI6;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 GVTEAIQNFS(1)FR;GVTEAIQNFS(1)FR 135.91 4.3274e-05 616800000.0 703630.0 561380.0 544260.0 548800.0 597590.0 523650.0 544950.0 660270.0 749910.0 647680.0 True False 664598.2412483705 534410.4621514408 579343.8704467893 600957.7869972632 644616.9331780119 520381.70611189515 600038.8641994755 657979.6774781772 613745.2476927114 641942.0590874157 1.0352931885989256 0.8324901828541321 0.9024862325898759 0.9361558079736734 1.0041668466066842 0.8106365656297226 0.9347243348605173 1.024982968733285 0.9560757688399654 1.0 19.292083561753937 -7.10020220950812 6.424895311493737 0.9917756008146442 0.9162682520268892 0.19953286568190332 0.06567577313987644 0.38184231996813744 20.71408643398212 0.030463213546676114 0.017497922324440165 7.939584779319437e-08 7.10020220950812 -0.075507348787755 GVTECYECHPKPTQR ddPTM_KYSE-520_SHP099_60min_R1 2 GVTECYECHPKPTQR 15 1 K7EPL2;Q9UBT2-2;Q9UBT2 K7EPL2 UBA2 SUMO-activating enzyme subunit 2 0 ; 169.04 3.4235e-08 1277830000.0 782250.0 623910.0 571400.0 504760.0 688800.0 584700.0 578350.0 601820.0 555080.0 522700.0 False True 738857.0331232864 593936.4270919978 608233.3582723257 552732.2386383716 743004.6412641028 581050.670416548 636815.2621520624 599732.426885844 454291.4644280921 518069.2846544463 1.4261741720822267 1.1464420777003892 1.1740386397893074 1.0669079503662249 1.4341800667833242 1.1215694263830185 1.2292086811840621 1.1576297700912095 0.8768932609681847 1.0 18.98278552590688 -7.647231910822897 4.764231687408236 0.9412499793113549 1.2189450122659664 0.48450171282788157 0.11731551302307035 0.1755078654102372 6.346085724534154 0.08406033710509084 0.029115652731452567 2.2530357823695064e-08 7.647231910822897 0.2776950329546115 GVTIKPTVDDD ddPTM_KYSE-520_SHP099_60min_R1 4 GVTIKPTVDDD 11 1 Q2VIR3;P41091 Q2VIR3 EIF2S3L;EIF2S3 Putative eukaryotic translation initiation factor 2 subunit 3-like protein;Eukaryotic translation initiation factor 2 subunit 3 0 ;;; 98.249 0.034759 3512190000.0 2794520.0 3238240.0 6489400.0 1495260.0 3250490.0 2940120.0 2316210.0 2638270.0 5126960.0 3966980.0 False True 2639502.4048624886 3082670.089702664 6907717.10740711 1637369.0608336888 3506285.070241805 2921769.620497865 2550355.1108312095 2629118.45714685 4196033.304143997 3931835.6434637383 0.6713155493288187 0.7840282171578757 1.75686822486857 0.4164388365408005 0.8917679649378615 0.743105736211278 0.648642349806993 0.668674557014478 1.0671944823328157 1.0 21.90677158547987 -4.525603188504933 24.997485512396565 0.8829199956251998 0.6994933820586214 0.042040652339074946 0.3391551887128453 282.55448537673703 2592542.171711576 0.08696936046105028 0.23307508962482376 2.9812391204188166e-05 4.525603188504933 -0.1834266135665784 GVTIPYRPKPSSS(ph)PVIFAGGQDR ddPTM_KYSE-520_SHP099_60min_R1 4 GVTIPYRPKPSSSPVIFAGGQDR 23 2 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 GVTIPYRPKPS(0.007)S(0.019)S(0.974)PVIFAGGQDR;GVTIPYRPKPS(0.122)S(0.122)S(0.756)PVIFAGGQDR;GVTIPYRPKPS(0.097)S(0.184)S(0.718)PVIFAGGQDR;GVTIPYRPKPS(0.009)S(0.065)S(0.926)PVIFAGGQDR 238.98 2.1944e-28 44425400000.0 12135600.0 11333800.0 11385600.0 10641400.0 10495300.0 9726000.0 9398000.0 9967200.0 12116000.0 8330900.0 True False 11462414.076281168 10789307.235619377 12119533.993604107 11652755.456546422 11321220.399911642 9665296.426323477 10348041.555641185 9932626.109561957 9916039.819504865 8257094.707342114 1.3881897304737125 1.306671125623114 1.4677721914498032 1.4112415891493801 1.371090050577347 1.1705444552705937 1.2532303337201431 1.2029202112372503 1.2009114792746214 1.0 22.977202822081114 -7.439187946610981 0.3799809588819593 0.9938298061158423 1.4237119084970706 0.7903090898056438 0.0608215084441097 0.5544630572651058 0.23767789109243043 0.08796342563680234 0.07117825375902717 3.637575812136664e-08 7.439187946610981 0.42988210238122837 GVTIPYRPKPSSS(ph)PVIFAGGQLTK ddPTM_KYSE-520_SHP099_60min_R1 2 GVTIPYRPKPSSSPVIFAGGQLTK 24 2 H3BRU6;F8VZX2 H3BRU6 PCBP2 1 GVTIPYRPKPS(0.056)S(0.203)S(0.742)PVIFAGGQLTK;GVTIPYRPKPS(0.016)S(0.117)S(0.866)PVIFAGGQLTK 202.05 8.372e-16 1546200000.0 1678950.0 1757460.0 1537880.0 1257580.0 1468130.0 1599170.0 1135890.0 1315220.0 1664170.0 1076230.0 True False 1585815.296596153 1673028.9835987596 1637014.2054950006 1377100.025094785 1583663.4784829651 1589188.9868480077 1250716.8464180978 1310657.808794655 1361998.67831177 1066695.439494271 1.486661738563353 1.568422364674172 1.5346594209412971 1.2909964495092239 1.484644463497278 1.489824487860804 1.1725154154695485 1.2287085519143575 1.2768393187820364 1.0 20.02471688920551 -7.2971192291748945 0.28648859944560195 0.9538204923450841 1.6029462704627868 0.7450375518399026 0.08970285085576699 0.8541051207846541 0.2564483817286554 0.18875468251109667 0.19980000405778897 5.04522769228656e-08 7.2971192291748945 0.6491257781177027 GVVDSEDLPLNISR ddPTM_KYSE-520_SHP099_60min_R1 6 GVVDSEDLPLNISR 14 0 P08238;P07900;P07900-2 P08238;P07900 HSP90AB1;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha 0 ;;;;; 304.57 5.7786e-33 3640140000.0 2974000.0 3836700.0 5075510.0 2380480.0 4036960.0 3717340.0 3277010.0 3154700.0 4390380.0 3795960.0 False True 2809026.2914779824 3652379.1729958914 5402685.495703137 2606720.1034825877 4354645.784839625 3694138.702182744 3608282.1513355747 3143757.0820125183 3593197.6644732375 3762330.74761219 0.7466186467685665 0.970775675507508 1.4359942966556085 0.6928471413995102 1.1574330054855901 0.9818750529913606 0.9590550096175399 0.8355876431139774 0.9550456633175339 1.0 21.84319525150939 -6.833340465502784 3.372035781609503 0.9187447343711229 1.010492363634399 0.0194842520089179 0.19762624673329007 0.9608122255509316 21.824460641046482 0.08783576216920254 0.058011863026553145 1.4677751629935916e-07 6.833340465502784 0.09174762926327606 GVVEVTHDLQK ddPTM_KYSE-520_SHP099_60min_R1 2 GVVEVTHDLQK 11 0 P50454;E9PKH2 P50454 SERPINH1 Serpin H1 0 ; 156.51 5.3075e-05 1489750000.0 3402100.0 3556500.0 2459680.0 2443020.0 3673100.0 3682900.0 2691350.0 3107600.0 3430200.0 3204900.0 False True 3213378.731081789 3385640.401584667 2618234.9084271505 2675203.886279253 3962152.072919825 3659913.6549976068 2963417.9230447877 3096820.4609192903 2807362.148305181 3176507.079374469 1.011607608856512 1.065837511765087 0.8242496688981862 0.8421841410805435 1.247329841840009 1.1521818033279285 0.9329171473555653 0.9749137601573138 0.8837890419114125 1.0 21.599009803752363 GVVHDDMECSHYMK ddPTM_KYSE-520_SHP099_60min_R1 1 GVVHDDMECSHYMK 14 0 P50579-3;P50579;F8VQZ7;P50579-2;F8VRR3 P50579-3 METAP2 Methionine aminopeptidase 2 0 147.73 3.9417e-06 489890000.0 430080.0 422330.0 289330.0 313280.0 373870.0 344800.0 304300.0 305920.0 364920.0 336450.0 False True 406222.6050567752 402040.6328697459 307980.6747443678 343054.0370089337 403291.4419706879 342647.975302934 335061.61368180625 304858.83492226445 298659.7268845922 333469.31475413946 1.2181708693535276 1.205630068740096 0.9235652610838753 1.0287424414503052 1.2093809658859525 1.0275247530812897 1.0047749488700055 0.9142035606695358 0.8956138201345102 1.0 18.347194487754418 -6.7870641887344725 2.0647933024566174 0.9322093904926865 1.1061898604041882 0.41903655288632424 0.09055364437820444 0.3487569063129509 3.0400233575993867 0.04921883464525423 0.03099545700529006 1.632810600614662e-07 6.7870641887344725 0.17398046991150173 GVVIPTWNIS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 2 GVVIPTWNISPIK 13 0 Q3T8J9-3;Q3T8J9;A0A087WUE6;Q3T8J9-2;A4PB68 Q3T8J9-3 GON4L GON-4-like protein 1 GVVIPTWNIS(1)PIK;GVVIPTWNIS(1)PIK 154.6 3.5892000000000003e-06 701300000.0 1133760.0 1302530.0 983060.0 794770.0 890550.0 1291880.0 860730.0 1089260.0 1424890.0 1234290.0 True False 1070868.0727054735 1239954.5036626107 1046429.6205516123 870304.7018436864 960631.2184636284 1283816.8977214475 947740.9883152854 1085481.6112951944 1166165.8945538383 1223355.1508630877 0.8753533852781563 1.0135687112510312 0.8553768051847799 0.7114080496000518 0.7852431223965458 1.0494228898416813 0.7747063374414583 0.887298844108661 0.9532521228451918 1.0 20.22241186117666 -7.85768148898089 2.898191459768497 0.9970506001656584 0.8674300859090517 0.1730478141756252 0.09724929839074761 0.45815925664740786 7.398566512294785 0.09657975183590055 0.026379651486195276 1.3877732468689825e-08 7.85768148898089 -0.1296205142566067 GVVIPTWNIS(ph)PIKK ddPTM_KYSE-520_SHP099_60min_R1 3 GVVIPTWNISPIKK 14 1 Q3T8J9-3;Q3T8J9;A0A087WUE6;Q3T8J9-2;A4PB68 Q3T8J9-3 GON4L GON-4-like protein 1 GVVIPT(0.011)WNIS(0.989)PIKK;GVVIPTWNIS(1)PIKK;GVVIPTWNIS(1)PIKK 239.55 1.3612000000000001e-18 12291520000.0 7524310.0 7500830.0 7530440.0 5556820.0 6573790.0 7061240.0 5621870.0 6183620.0 7769080.0 5958600.0 True False 7106921.524959876 7140478.867824634 8015864.211530001 6084938.502081144 7091109.873251367 7017168.1819260195 6190183.483763834 6162170.465487752 6358410.914569077 5905811.439720652 1.2033776556360962 1.2090597440683581 1.3572841417891859 1.0303306436700195 1.2007003517854915 1.1881801939578915 1.048151223069972 1.0434079259698184 1.0766362894359243 1.0 22.493703864278494 -6.527997271261771 0.5120445279283635 1.0054538890847065 1.2471161346468405 0.5073935006985959 0.07534092543903813 0.8172539233442597 0.4584984496779453 0.0709006250735891 0.0734517787771135 2.9648500180690455e-07 6.527997271261771 0.241662245562134 GVWDHGGR ddPTM_KYSE-520_SHP099_60min_R1 3 GVWDHGGR 8 0 Q9Y3S2;D6R8Y9;D6RBR7 Q9Y3S2 ZNF330 Zinc finger protein 330 0 ;; 122.74 0.0014567 539560000.0 1027730.0 962110.0 765790.0 686140.0 977250.0 1026540.0 703150.0 811590.0 831460.0 763820.0 False True 970719.7681710386 915888.7914434489 815154.0487073225 751350.5393044861 1054154.0152081072 1020132.9830843207 774231.264082689 808774.78371653 680487.8234009169 757053.149042967 1.2822346349106128 1.2098077824539464 1.0767461303579597 0.9924673588034211 1.3924438680966085 1.347505104990221 1.0226907649237544 1.0683196876453749 0.8988640021657124 1.0 19.530035062850015 -6.885865608406623 8.026450471935844 0.9993229104309166 1.2076813581560446 0.4562341746610442 0.11731847126157238 0.2640505311751631 17.47818718541386 0.05394281783627851 0.03632043967181389 1.3005719752695964e-07 6.885865608406623 0.20835844772512802 GWAFGSNS(ph)LPIAGSVGMGVAR ddPTM_KYSE-520_SHP099_60min_R1 2 GWAFGSNSLPIAGSVGMGVAR 21 0 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 SAMD4B Protein Smaug homolog 2 1 GWAFGSNS(1)LPIAGSVGMGVAR;GWAFGSNS(1)LPIAGSVGMGVAR 325.11 3.0018e-54 1422580000.0 1056910.0 1090720.0 1009340.0 705140.0 776820.0 821640.0 628260.0 752530.0 893080.0 678760.0 True False 998281.0954021487 1038320.1739959024 1074403.671401101 772156.2935919279 837951.3144988093 816511.8399881176 691770.6520267216 749919.6490718226 730919.1847147087 672746.7144672899 1.4838884738257416 1.5434043030861764 1.5970403842876595 1.147766725554884 1.2455673085855732 1.213698740445975 1.0282780088706873 1.1147132092137257 1.0864700919327155 1.0 19.359703914545058 -5.268006849317568 23.853685676902188 1.129655779881356 1.5416403909492409 0.8686804872056794 0.07510700796900356 93.94544884227315 341219.5498276437 0.02217124821704472 0.03382642519254385 5.395021138865365e-06 5.268006849317568 0.41198461106788486 GWDDLFNK ddPTM_KYSE-520_SHP099_60min_R1 4 GWDDLFNK 8 0 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ;;; 157.54 0.0007091 2952092000.0 4197780.0 4023050.0 2730440.0 2466760.0 4494460.0 4467130.0 3141520.0 2908730.0 3128860.0 3291160.0 False True 3964920.7753330288 3829776.6392788384 2906448.5312584653 2701200.128741564 4848148.4320207015 4439248.984672259 3459095.4998806026 2898640.294532687 2560737.8961419594 3262002.882883738 1.2154865944900344 1.1740567917258142 0.8910012147779132 0.8280802395715843 1.4862489722065326 1.3608967079599235 1.060420736606654 0.8886075207788215 0.7850201204844329 1.0 21.637326626395502 -7.1628318846962316 3.903787619768692 0.876648860544707 1.1510792770523 0.28224902694562215 0.18935333982785676 0.34087273605003504 9.312383896583414 0.10728582213452333 0.058196452790451395 6.87334455548657e-08 7.1628318846962316 0.2744304165075929 GWDLVDAVT(ph)PGPQPTLEQLEEGGPRPLER ddPTM_KYSE-520_SHP099_60min_R1 3 GWDLVDAVTPGPQPTLEQLEEGGPRPLER 29 1 A0A0A0MQU1;Q27J81-2;Q27J81 A0A0A0MQU1 INF2 Inverted formin-2 1 GWDLVDAVT(0.999)PGPQPT(0.001)LEQLEEGGPRPLER;GWDLVDAVT(1)PGPQPTLEQLEEGGPRPLER;GWDLVDAVT(1)PGPQPTLEQLEEGGPRPLER 163.51 1.3827999999999998e-09 734240000.0 348046.0 404692.0 319201.0 259671.0 264805.0 402790.0 307705.0 450732.0 509947.0 445709.0 True False 328739.1945675003 385249.9888649237 339777.2071996576 284350.0537670672 285643.6469656517 400276.03820263577 338810.82431140344 449168.5158936391 417353.47951774864 441760.36501635495 0.744157286621514 0.8720791165831749 0.769143712535366 0.6436748886617294 0.6466031576985785 0.9060931443856822 0.7669561398946687 1.0167696141708185 0.9447508481262172 1.0 18.752904459541412 -7.094510465981513 1.4560544467632914 0.9964108619305927 0.749566395837672 0.594270463231555 0.0825359085045149 0.31872661198558994 1.2640496323977728 0.06398160990037702 0.028036379813035334 8.044323624534568e-08 7.094510465981513 -0.24684446609292066 GWDS(ph)SHEDDLPVYLAR ddPTM_KYSE-520_SHP099_60min_R1 5 GWDSSHEDDLPVYLAR 16 0 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 GWDS(0.817)S(0.183)HEDDLPVYLAR;GWDS(0.862)S(0.138)HEDDLPVYLAR;GWDS(0.954)S(0.046)HEDDLPVYLAR;GWDS(0.967)S(0.033)HEDDLPVYLAR;GWDS(0.965)S(0.035)HEDDLPVYLAR 295.98 9.175999999999999e-38 1780640000.0 1450300.0 1358960.0 1290700.0 1319730.0 1323750.0 1385810.0 1359170.0 1481910.0 1514040.0 1415340.0 True False 1369848.9678986254 1293673.521759455 1373900.5871930178 1445156.742408706 1427921.5938927927 1377160.6457498802 1496568.1678209018 1476769.6000903929 1239128.5018424527 1402801.1887178563 0.976509699960157 0.9222073178750707 0.9793979348197921 1.0301935541768126 1.0179073167152761 0.9817218981747433 1.0668426715468835 1.0527290766271327 0.8833243882370826 1.0 20.41987912755151 -4.9998266694637685 6.591418875694686 1.0088275127372826 0.9493478226888529 0.16703606947146588 0.048860416899480015 0.21105641081176688 47.558697431096206 0.012840903406102043 0.025248264846211295 1.0003991879632049e-05 4.9998266694637685 -0.05947969004842968 GWGS(ph)PGRPK ddPTM_KYSE-520_SHP099_60min_R1 1 GWGSPGRPK 9 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2;H0YCW2;S4R3B3;H7C453;S4R3U7 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 GWGS(1)PGRPK 65.347 0.045571 1559000000.0 2284000.0 2074900.0 1935900.0 1710000.0 2076200.0 1830400.0 1491600.0 1598600.0 2007300.0 1659100.0 True False 2157301.9669588814 1975218.6895116041 2060691.2115495189 1872517.8858697538 2239585.128037933 1818975.7946475947 1642385.4846131518 1593054.8297160435 1642824.9199151618 1644401.6647602695 1.3119069465752369 1.2011777486247943 1.2531556344841932 1.1387229324793589 1.3619453057197146 1.1061627056384522 0.9987739126088688 0.96877476096954 0.9990411437309402 1.0 20.649131306895807 -6.539600089639015 3.751070068217847 0.9910873600163876 1.244531009461068 0.8208832361066233 0.057544705660279784 0.09018760178512811 2.7878620057309353 0.021734501472843018 0.01721622839548874 2.8866884221315053e-07 6.539600089639015 0.25344364944468034 GWLRDPS(ph)ASPGDAGEQAIR ddPTM_KYSE-520_SHP099_60min_R1 1 GWLRDPSASPGDAGEQAIR 19 1 P18206-2;P18206 P18206-2 VCL Vinculin 1 GWLRDPS(0.715)AS(0.285)PGDAGEQAIR 128.26 4.6002e-05 0.0 123580.0 120330.0 124360.0 78977.0 113980.0 105490.0 93524.0 95495.0 147250.0 109220.0 True False 116724.77104937761 114549.16618098783 132376.44458303513 86482.95033469904 122949.57754251212 104831.59778047125 102978.31862628086 95163.75013370064 120513.11187042677 108252.39577187411 1.0782650140635943 1.0581674924071263 1.2228500222941845 0.7989010286381933 1.1357677275024023 0.9683997941383977 0.9512798113336208 0.8790913998267913 1.1132604596058113 1.0 16.72403942853389 -5.24158817008888 24.998702673053494 0.978109954730959 1.113601486955422 0.29061168090027156 0.1012878727571512 1080.8741544579168 1361146.9481107013 0.02624344752982016 0.04537907639309613 5.733394558507232e-06 5.24158817008888 0.13549153222446308 GWLRDPSAS(ph)PGDAGEQAIR ddPTM_KYSE-520_SHP099_60min_R1 8 GWLRDPSASPGDAGEQAIR 19 1 P18206-2;P18206 P18206-2 VCL Vinculin 1 GWLRDPSAS(1)PGDAGEQAIR;GWLRDPS(0.497)AS(0.503)PGDAGEQAIR;GWLRDPS(0.383)AS(0.617)PGDAGEQAIR;GWLRDPSAS(1)PGDAGEQAIR;GWLRDPSAS(1)PGDAGEQAIR;GWLRDPS(0.208)AS(0.792)PGDAGEQAIR;GWLRDPS(0.053)AS(0.947)PGDAGEQAIR;GWLRDPS(0.001)AS(0.999)PGDAGEQAIR 220.76 5.9067e-19 6747960000.0 3435140.0 3402480.0 3114980.0 2474720.0 2787760.0 2659790.0 2284120.0 2357120.0 3900360.0 2532200.0 True False 3244585.9364181804 3239019.753573397 3315776.5949442205 2709916.6447482985 3007140.851815349 2643189.2640109933 2515021.140462985 2348943.700875946 3192152.944074278 2509766.6780217886 1.2927838929535793 1.2905660840657944 1.321149341881347 1.079748435772631 1.1981754631412962 1.0531613504783517 1.0020936059464052 0.9359211441628493 1.2718923125516792 1.0 21.259121818716515 -5.490330515148003 1.110507443426776 1.0497720099181862 1.315772560466488 0.5267569271187711 0.09503320599791802 0.4073669741754722 1.0174994346300381 0.03684180889116139 0.07604784703588932 3.233474831405877e-06 5.490330515148003 0.26600055054830185 GWS(ph)QEGPVK ddPTM_KYSE-520_SHP099_60min_R1 3 GWSQEGPVK 9 0 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GWS(1)QEGPVK;GWS(1)QEGPVK;GWS(1)QEGPVK 111.12 0.0009291000000000001 1716100000.0 2707470.0 2552310.0 2438150.0 2414760.0 2652590.0 2814320.0 2707470.0 3122090.0 3320900.0 2766360.0 True False 2557281.241892367 2429693.1965045864 2595317.050177932 2644258.0643759305 2861333.741827447 2796754.7849610047 2981167.489960831 3111260.198491284 2717908.2730764067 2741852.202595511 0.9326838403147975 0.8861503162732745 0.946556144682465 0.964405762598292 1.0435769437604374 1.0200239029344913 1.0872823440806831 1.134729361249334 0.9912672428162107 1.0 21.386719375186274 -5.5948656903209315 1.3433011224011777 1.0597676199257826 0.9099692002838919 0.6420289252668383 0.04220431618182007 0.2503779368405843 0.9304851288658832 0.01544591794617183 0.025842184047338394 2.541758646932109e-06 5.5948656903209315 -0.14979841964189067 GWSGPKPGFPEPTNNT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 GWSGPKPGFPEPTNNTPK 18 1 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 GWSGPKPGFPEPT(0.175)NNT(0.825)PK;GWSGPKPGFPEPTNNT(1)PK;GWSGPKPGFPEPTNNT(1)PK 173.18 3.5844e-08 1556086000.0 2099827.0 2287867.0 1853737.0 1544097.0 1614274.0 1797479.0 1600926.0 2044954.0 2463231.0 2017870.0 True False 1983345.4104086547 2177954.4351616222 1973231.853104067 1690847.5146303081 1741308.1798373538 1786260.266820021 1762763.2236120924 2037860.531869851 2015970.3434003622 1999993.2416791054 0.9916760562368331 1.0889808974219874 0.9866192604968151 0.8454266141473297 0.8706570320084825 0.89313315145023 0.8813845901459921 1.0189337090754136 1.0079885778553146 1.0 20.931563694217918 -5.002828126045337 23.035377784071216 0.9249509695437664 1.0396964634867731 0.33385949737420384 0.061868917360703 45.877412203885484 373717.20055283565 0.01745679897813582 0.03516657225565908 9.935091562545956e-06 5.002828126045337 0.1147454939430067 GWSQEGPVKS(ph)PAECR ddPTM_KYSE-520_SHP099_60min_R1 14 GWSQEGPVKSPAECR 15 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 GWS(0.004)QEGPVKS(0.996)PAECR;GWS(0.002)QEGPVKS(0.998)PAECR;GWSQEGPVKS(1)PAECR;GWS(0.003)QEGPVKS(0.997)PAECR;GWSQEGPVKS(1)PAECR;GWSQEGPVKS(1)PAECR;GWS(0.004)QEGPVKS(0.996)PAECR;GWS(0.003)QEGPVKS(0.997)PAECR;GWSQEGPVKS(1)PAECR;GWSQEGPVKS(1)PAECR;GWSQEGPVKS(1)PAECR;GWSQEGPVKS(1)PAECR;GWSQEGPVKS(1)PAECR;GWSQEGPVKS(1)PAECR 216.65 2.2894e-14 16596360000.0 10720760.0 9481890.0 8728460.0 9080930.0 9712490.0 10295170.0 10500850.0 11419640.0 13398780.0 11334600.0 True False 10126058.071494794 9026365.771792956 9291110.497629778 9943978.85691884 10476807.706491262 10230914.0252306 11562378.396419952 11380027.934204016 10965899.30775712 11234184.262185365 0.9013612234917171 0.8034731815977063 0.8270391762136182 0.8851536190652134 0.9325828615573399 0.9106948743637928 1.029213882074135 1.0129821328024293 0.9761188753747524 1.0 23.42139203540261 -6.127467208010479 1.053881022194385 1.0052814874582585 0.8404690744712985 0.7844562610690183 0.03396814968377835 0.22202832878471904 0.522648040937092 0.01778032700152955 0.018345826832124528 7.45646170920247e-07 6.127467208010479 -0.16481241298696003 GYADS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 4 GYADSPSK 8 0 Q01518-2;Q01518;Q5T0R4;Q5T0R3;Q5T0R2;Q5T0R1;Q5T0R9;Q5T0R7;Q5T0R6;Q5T0R5;Q5T0R8;Q5T0S3 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 1 GYADS(1)PSK;GYADS(0.992)PS(0.008)K;GYADS(0.999)PS(0.001)K;GYADS(0.997)PS(0.003)K 188.91 6.2851999999999996e-06 10024630000.0 19362100.0 16529100.0 16390300.0 15798900.0 16168800.0 16213900.0 15253900.0 15962600.0 19375200.0 15506900.0 True False 18288045.715610556 15735017.225315094 17446844.963407222 17300422.70588751 17441192.572112408 16112703.035859158 16795913.075717736 15907229.466298837 15857152.089045119 15369520.930185648 1.1898904200516063 1.0237805912617364 1.1351586716760782 1.1256318778231782 1.1347909054118928 1.0483542791638942 1.092806545630883 1.034985380387305 1.0317271540911706 1.0 23.873568860963257 -7.206788994807727 0.7501356716584825 1.0022167057875537 1.1174859685521379 0.49474134752202936 0.04220594082186153 0.5762194409507646 0.612679984778313 0.037335835475652154 0.01792655456097053 6.211707613433938e-08 7.206788994807727 0.11526926276458416 GYAFIEFASFEDAK ddPTM_KYSE-520_SHP099_60min_R1 6 GYAFIEFASFEDAK 14 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ;;;;; 239.02 1.6249e-17 371683000.0 440281.0 610168.0 638302.0 632096.0 586241.0 564810.0 522870.0 560343.0 663912.0 477429.0 False True 415857.7352515862 580854.6133991593 679447.9682393095 692170.2137934081 632374.8314449888 561284.8112843689 575726.8023194416 558399.30091804 543362.3166595503 473199.3504941413 0.8788214413593853 1.2275050944017534 1.4358598918823364 1.462745485746346 1.336381444278458 1.1861487356190237 1.2166686233153858 1.180050860879095 1.1482735893279248 1.0 18.852088567895738 -7.89077421775304 0.8478614502336731 1.0055384835812091 1.2735912239623326 0.20110361251108821 0.1522616589562258 0.9901083883662982 1.6091520171736433 0.15663098435426073 0.05747415789024402 1.2859550321401675e-08 7.89077421775304 0.2680527403811235 GYAFIEYEHER ddPTM_KYSE-520_SHP099_60min_R1 2 GYAFIEYEHER 11 0 P08621;P08621-2;M0QYR1;P08621-3 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 0 ; 126.19 0.00030764 574480000.0 653080.0 564340.0 413080.0 428880.0 606120.0 566940.0 504290.0 474390.0 457590.0 479200.0 False True 616852.3505172959 537228.25930839 439707.79775136855 469640.62625252595 653818.1956489519 563401.5171642848 555268.5545961155 472744.4518134585 374503.19090518565 474954.66081195814 1.2987604952918175 1.13111482765528 0.9257889942582449 0.9888114908687334 1.3765907561181059 1.1862216831415497 1.169098022213019 0.9953464842418408 0.7885030336684226 1.0 18.857430274735773 -7.4461651196819005 3.894695778106205 0.8916357117862177 1.1467869412184886 0.39111173467582305 0.1324066427617444 0.254147945705568 7.220105690026562 0.09034406609130355 0.037835431145254526 3.579603139575579e-08 7.4461651196819005 0.25515122943227087 GYALVPIIVNS(ph)STPK ddPTM_KYSE-520_SHP099_60min_R1 1 GYALVPIIVNSSTPK 15 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 GYALVPIIVNS(0.333)S(0.333)T(0.333)PK 74.32600000000001 0.016293000000000002 293900000.0 276500.0 355390.0 210510.0 174120.0 210760.0 316560.0 255240.0 304120.0 371520.0 325380.0 True False 261161.99381091536 338316.5309487342 224079.81142790886 190668.31244891323 227345.61293963715 314584.2316180303 281042.15010234696 303065.0787021418 304061.33325705223 322497.3863418095 0.8098111949785359 1.049052008719718 0.6948267518373326 0.5912243649839293 0.7049533502224337 0.9754628872700624 0.8714555900446125 0.9397442941783357 0.9428334806248097 1.0 18.29892794279599 -6.267506995883696 24.75034563376791 0.937480544972604 0.7713725621189204 0.3701315360128382 0.11447793425971257 580.0827598210584 2366200.9262687336 0.04448997634289425 0.04024904678934459 5.401234140530708e-07 6.267506995883696 -0.16610798285368367 GYCPAKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 GYCPAKSPK 9 1 E7ETI4;E7EMC5;A0A669KBI3;F5GXF9;P51825;P51825-3;P51825-2 E7ETI4 AFF1 AF4/FMR2 family member 1 1 GYCPAKS(1)PK 66.663 0.05588200000000001 0.0 278230.0 263880.0 231870.0 256670.0 290410.0 266510.0 251340.0 301070.0 331200.0 299580.0 True False 262796.0272622455 251202.80870804458 246816.71120511703 281063.83962935064 313263.6147931302 264846.61223313486 276747.9000420153 300025.65844026604 271062.4288725664 296925.9542697131 0.8850557638472195 0.8460116237594514 0.8312399359367579 0.9465788880619238 1.0550226758169372 0.8919618121107766 0.9320434810849542 1.010439317028303 0.9128957067402281 1.0 18.179743679110874 -5.335569804012548 5.5404560479535325 0.9649528577807043 0.8535310935859135 0.535201947394693 0.04715232550804776 0.1675843827435528 9.276576850583684 0.01332535343826984 0.020082052551423157 4.617747650205535e-06 5.335569804012548 -0.11142176419479077 GYDDRDYYSR ddPTM_KYSE-520_SHP099_60min_R1 9 GYDDRDYYSR 10 1 P62995;P62995-3;H7C2L4;H7BXF3 P62995 TRA2B Transformer-2 protein homolog beta 0 ;;;;;;;; 181.68 1.016e-05 18972370000.0 12039520.0 12763350.0 8830310.0 7086960.0 11234380.0 11633090.0 9086430.0 9380200.0 10138370.0 9882340.0 False True 11371663.825411908 12150179.507821076 9399525.911595551 7760502.54762778 12118461.791121673 11560483.570234379 10004975.019411016 9347662.275555141 8297497.5755095435 9794790.155944178 1.160991062019922 1.2404736920726658 0.9596454606933307 0.7923092199089281 1.237235468874984 1.1802686311986634 1.0214588429277665 0.9543504380114067 0.8471337765693765 1.0 23.223583153780115 -7.167905805756201 3.1166483141192596 0.9220809343556422 1.0885362512913939 0.22474253042221193 0.1328591879546221 0.43950610608060836 8.155936711024687 0.07947677477334576 0.04073074520913281 6.7935096124725e-08 7.167905805756201 0.16645531693575166 GYDS(ph)EDDTWEPEQHLVNCEEYIHDFNR ddPTM_KYSE-520_SHP099_60min_R1 11 GYDSEDDTWEPEQHLVNCEEYIHDFNR 27 0 Q9Y232-2;Q9Y232 Q9Y232-2 CDYL Chromodomain Y-like protein 1 GY(0.034)DS(0.921)EDDT(0.045)WEPEQHLVNCEEYIHDFNR;GY(0.001)DS(0.998)EDDT(0.001)WEPEQHLVNCEEYIHDFNR;GYDS(0.998)EDDT(0.002)WEPEQHLVNCEEYIHDFNR;GYDS(1)EDDTWEPEQHLVNCEEYIHDFNR;GYDS(1)EDDTWEPEQHLVNCEEYIHDFNR;GYDS(0.995)EDDT(0.005)WEPEQHLVNCEEYIHDFNR;GYDS(1)EDDTWEPEQHLVNCEEYIHDFNR;GYDS(1)EDDTWEPEQHLVNCEEYIHDFNR;GYDS(0.998)EDDT(0.002)WEPEQHLVNCEEYIHDFNR;GYDS(1)EDDTWEPEQHLVNCEEYIHDFNR;GY(0.11)DS(0.695)EDDT(0.195)WEPEQHLVNCEEYIHDFNR 344.67 1.9021999999999998e-78 8059460000.0 818043.0 790659.0 734641.5 723922.0 745277.0 734825.0 774191.0 828590.0 908443.0 855142.0 True False 772664.5240617096 752674.5548366464 781997.6665579597 792723.3292249151 803926.0598539289 730238.6846055072 852453.7816560337 825715.8146843604 743492.6511844221 847566.1071704093 0.9116274441898605 0.8880422995551848 0.9226391427668703 0.9352938048353701 0.9485113350483394 0.8615713611335893 1.00576671771591 0.9742199548788049 0.8772090399727811 1.0 19.69296637220492 -13.999999900947033 0.049301821207099604 1.2831479716009573 0.783062631942986 0.23452938712152838 0.04152498720519793 837.533547953238 3.049149204178371 31.767637318657588 7.237607279922019 1.0000002280779105e-14 13.999999900947033 -0.5000853396579713 GYDS(ph)EDDTWEPEQHLVNCEEYIHDFNRR ddPTM_KYSE-520_SHP099_60min_R1 5 GYDSEDDTWEPEQHLVNCEEYIHDFNRR 28 1 Q9Y232-2;Q9Y232 Q9Y232-2 CDYL Chromodomain Y-like protein 1 GY(0.001)DS(0.996)EDDT(0.003)WEPEQHLVNCEEYIHDFNRR;GYDS(1)EDDTWEPEQHLVNCEEYIHDFNRR;GYDS(0.999)EDDT(0.001)WEPEQHLVNCEEYIHDFNRR;GYDS(1)EDDTWEPEQHLVNCEEYIHDFNRR;GYDS(1)EDDTWEPEQHLVNCEEYIHDFNRR 226.28 5.6512e-23 2109420000.0 427930.0 494158.0 382492.0 348310.0 344523.0 363588.0 314686.2 381180.2 508119.4 359560.0 True False 404191.8698426938 470417.90793372004 407148.0463288381 381413.27767678007 371635.00003227685 361318.7124258798 346497.75213734986 379857.9748543275 415857.72560770245 356374.5781334468 1.1341770559496573 1.3200097223477287 1.1424721944570884 1.0702594996379269 1.0428212976883993 1.013873420260021 0.9722852677993252 1.0658952634721526 1.1669118706104278 1.0 18.443034900777818 -5.119703531731243 2.9085078005697116 1.0443207754690633 1.2281955554726742 0.5499091525219018 0.06518016137426653 0.1876794639477783 3.04132032651474 0.018458584643384575 0.03684362717882592 7.590955898060149e-06 5.119703531731243 0.1838747800036109 GYEEWLLNEIR ddPTM_KYSE-520_SHP099_60min_R1 2 GYEEWLLNEIR 11 0 P12814-3;P12814;P12814-2;P12814-4;H9KV75;A0A494C1A0;P35609;P35609-2;F6THM6;A0A494C060;O43707;O43707-2 P12814-3;O43707 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 0 ; 212.21 9.6263e-09 8315500000.0 5427900.0 5777100.0 3977000.0 3949400.0 6234800.0 5817800.0 4950500.0 4026600.0 4229800.0 4227200.0 False True 5126803.566749606 5499559.444396117 4233363.783424984 4324749.7885695975 6725443.288840627 5781488.952196668 5450944.852224064 4012632.664415509 3461774.9445808544 4189750.296711839 1.2236537272336199 1.312622245939628 1.0104095670683222 1.0322213693650688 1.6052133928169485 1.3799125348195673 1.3010190264804145 0.957725969388836 0.826248511110004 1.0 21.998432833193817 -7.309762469454736 5.248291750462771 0.911308629889932 1.2669402510978658 0.471916213767098 0.16413908464705465 0.2024987671600787 13.168326364475949 0.10042099832101975 0.04766926912643234 4.9004676946944563e-08 7.309762469454736 0.3556316212079338 GYEEWLLNEIRR ddPTM_KYSE-520_SHP099_60min_R1 4 GYEEWLLNEIRR 12 1 P12814-3;P12814;P12814-2;P12814-4;H9KV75;A0A494C1A0;P35609;P35609-2;F6THM6;A0A494C060;O43707;O43707-2 P12814-3;O43707 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 0 ;;; 180.28 1.4236000000000002e-06 1884094000.0 1007895.0 1046011.0 839095.0 541416.0 1140068.0 855513.0 625653.0 488099.0 791215.0 589139.0 False True 951985.0551611295 995759.0614654787 893184.4062994698 592872.0138573443 1229784.8655004099 850173.4260305659 688900.1110248545 486405.8984921626 647550.3009070266 583919.6868032066 1.6303356038104753 1.7053014035491336 1.529635712728576 1.0153314355663348 2.1060856369360152 1.4559766441255346 1.1797857249793815 0.8330013689983564 1.1089715170457422 1.0 19.155410426729333 -6.828413416940477 3.055708250179903 0.9836308917013551 1.582721790089503 0.5276714804875122 0.2579233275833669 0.20682571785609816 3.8991920037831167 0.11850270273623988 0.07765648294311647 1.4845218120508108e-07 6.828413416940477 0.5990908983881479 GYES(ph)PTLSK ddPTM_KYSE-520_SHP099_60min_R1 1 GYESPTLSK 9 0 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 GYES(0.972)PT(0.028)LSK 69.721 0.040894 0.0 153180.0 153090.0 139570.0 107030.0 140160.0 146580.0 146660.0 146170.0 183030.0 149580.0 True False 144682.80004324063 145735.32660722503 148566.90551989566 117202.0990202572 151189.79459868846 145665.13984890972 161485.82406366657 145662.9703863345 149796.36581082654 148254.8375714792 0.975906097994837 0.9830055396132391 1.002104942769682 0.7905448546577759 1.0197967032663888 0.9825321199295038 1.0892448887936503 0.9825174865953694 1.010397827582551 1.0 17.177719655272284 GYFDEEMNR ddPTM_KYSE-520_SHP099_60min_R1 1 GYFDEEMNR 9 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4;A0A075B730;P58107 Q15149;Q15149-4;A0A075B730 PLEC;EPPK1 Plectin;Epiplakin 0 134.48 0.0042957 0.0 401360.0 437500.0 313540.0 247890.0 444490.0 414630.0 338910.0 363010.0 390040.0 370390.0 False True 379095.7607086763 416481.84329911217 333751.2900817372 271449.3910691537 479468.8341978523 412042.14037081075 373170.33024285553 361750.8030371713 319218.5681082598 367108.63275905984 1.0326528086782525 1.1344920988890417 0.9091349543413879 0.7394252459524996 1.3060679902685277 1.1223983954668852 1.016511999290886 0.9854053289849902 0.8695479746938254 1.0 18.485847515031306 -7.413693268989459 3.2288844454001424 0.9335014219854134 1.038315810027005 0.07576552348280563 0.14263818209290957 0.7507022506773574 14.507263156758567 0.10102416606944052 0.0409330692048368 3.857507072700962e-08 7.413693268989459 0.10481438804159149 GYFEHREDR ddPTM_KYSE-520_SHP099_60min_R1 4 GYFEHREDR 9 1 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0;M0QZV6 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 0 ;;; 150.61 0.00026612 2474950000.0 2067940.0 2836210.0 2169070.0 1560710.0 2287150.0 2309400.0 1640310.0 1667720.0 2232400.0 1476260.0 False True 1953227.2458638106 2699954.2143619983 2308891.7228347054 1709039.4091554268 2467135.692896618 2294986.1779715656 1806128.542682891 1661935.068568776 1827052.4342243879 1463181.4849129014 1.3349179619916254 1.8452626978960973 1.5779940811458166 1.1680296851604575 1.6861446910965243 1.568490444716213 1.234384497962947 1.1358365901327037 1.2486847688160478 1.0 20.48067729378715 -6.84824961956833 4.222229926504015 1.1517932585363126 1.5375616667909497 0.5091196841274876 0.1819411503221869 0.19248254254447225 6.345772449160043 0.08024373819603331 0.053454089297776564 1.4182421239316065e-07 6.84824961956833 0.3857684082546371 GYFEYIEENKYS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 GYFEYIEENKYSR 13 1 A0A1W2PPS1;Q00839-2;Q00839;Q5RI18;A0A1W2PP35;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 GYFEYIEENKYS(1)R 66.809 0.018115 391510000.0 262880.0 247460.0 194000.0 242170.0 229130.0 210230.0 218250.0 238000.0 265860.0 231750.0 True False 248297.52236171186 235571.65015496762 206505.55041097506 265185.76398893475 247161.2274286351 208917.876589141 240312.83991473625 237174.43354961748 217586.5257852068 229696.8752987717 1.0809791036066376 1.0255762071145047 0.8990350876230634 1.15450314090691 1.0760321711261729 0.9095373035327408 1.0462172791952704 1.0325540268718048 0.9472768208195574 1.0 17.80937170545988 GYFEYIEENKYSR ddPTM_KYSE-520_SHP099_60min_R1 3 GYFEYIEENKYSR 13 1 A0A1W2PPS1;Q00839-2;Q00839;Q5RI18;A0A1W2PP35;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ;; 178.84 2.6373e-07 5550510000.0 5294920.0 4927890.0 3335710.0 3169270.0 4472250.0 4476770.0 3643430.0 3550250.0 3689020.0 3547820.0 False True 5001200.232438663 4691146.767486313 3550735.2039247034 3470476.4679242317 4824190.631378315 4448828.817856489 4011743.4608501587 3537935.0113845817 3019186.9606264313 3516389.074962192 1.422254513315605 1.334080691152401 1.009767442746045 0.986943251711003 1.3719160560838064 1.265169673496475 1.1408701868103979 1.006127290229572 0.8586043513000317 1.0 21.745663277309355 -7.249601216917171 2.5162422429737954 0.9312556123751946 1.220364526403259 0.4481714826351594 0.137754148684094 0.3122959673010028 3.832568447539641 0.09681992128151036 0.042853208337615335 5.628579221214756e-08 7.249601216917171 0.2891089140280644 GYFSEEMNR ddPTM_KYSE-520_SHP099_60min_R1 2 GYFSEEMNR 9 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 151.04 0.0034049999999999996 299950000.0 932880.0 982940.0 813470.0 760550.0 875510.0 942260.0 788760.0 778260.0 908470.0 870580.0 False True 881131.2867498257 935718.0869769802 865907.5777980202 832832.4433323044 944407.6560295217 936379.0058264 868495.5583557724 775560.39770725 743514.7486650358 862867.3385009915 1.021166577333386 1.084428677764705 1.003523414505769 0.9651917579579904 1.094499251379923 1.0851946342680163 1.0065226942817866 0.8988176549301139 0.8616790965302965 1.0 19.718779243807887 -7.148021382438992 4.082154465064356 0.9105100197475762 1.0415521338774851 0.5403198230888189 0.0499870050923046 0.17152090190240465 4.8724661304523345 0.025656598769013987 0.01412472099172326 7.111784979995806e-08 7.148021382438992 0.13104211412990896 GYGFVDFDS(ph)PAAAQK ddPTM_KYSE-520_SHP099_60min_R1 7 GYGFVDFDSPAAAQK 15 0 E7ETU5;F6Y5H0;P29558-2;P29558;E7EPF2;C9J9B2;C9JIJ9;A0A1B0GUW5;Q6XE24-3;Q6XE24-4;Q6XE24-5;Q6XE24-2;Q6XE24 E7ETU5 RBMS1;RBMS3 RNA-binding motif, single-stranded-interacting protein 1;RNA-binding motif, single-stranded-interacting protein 3 1 GYGFVDFDS(1)PAAAQK;GYGFVDFDS(1)PAAAQK;GYGFVDFDS(1)PAAAQK;GYGFVDFDS(1)PAAAQK;GYGFVDFDS(1)PAAAQK;GYGFVDFDS(1)PAAAQK;GYGFVDFDS(1)PAAAQK 281.92 6.3771e-33 3933765000.0 4021160.0 3818510.0 3501410.0 3056700.0 3088540.0 3581450.0 3403670.0 3428650.0 4112760.0 3434770.0 True False 3798098.2388162743 3635063.04789964 3727116.4910540837 3347207.8489696323 3331590.5266112513 3559096.842078577 3747746.180218055 3416756.8134029284 3365986.458242561 3404340.610010625 1.1156634056086476 1.067773018131783 1.0948130395925486 0.9832176719118554 0.9786301984045167 1.0454585042439302 1.1008728589605956 1.0036471683696375 0.9887337501849017 1.0 21.69894395763767 -5.245473609860851 24.1495135942127 1.01792871645729 1.0902521556369584 0.497250655257059 0.035967268959090214 518.2240310906346 783852.5651966912 0.010684800332538937 0.01842219439882352 5.682329194916109e-06 5.245473609860851 0.07232343917966833 GYGFVDFDS(ph)PSAAQK ddPTM_KYSE-520_SHP099_60min_R1 2 GYGFVDFDSPSAAQK 15 0 F8W1T6;Q15434 F8W1T6 RBMS2 RNA-binding motif, single-stranded-interacting protein 2 1 GYGFVDFDS(0.998)PS(0.002)AAQK;GYGFVDFDS(1)PSAAQK 232.17 2.3501e-16 2818600000.0 3904300.0 3659400.0 3247900.0 2814800.0 3035300.0 3508400.0 3206900.0 3451800.0 4063700.0 3405700.0 True False 3687720.6959709073 3483596.93112862 3457264.8308237367 3082317.7456995198 3274160.841505415 3486502.774225098 3531084.7483279137 3439826.511456173 3325834.5175405997 3375528.1475945087 1.092487022689731 1.0320153702794996 1.0242144872314205 0.9131364370035135 0.9699699419892762 1.0328762261128448 1.0460836331180525 1.019048386222904 0.9852782652429304 1.0 21.68668181854042 -4.394535726066966 1.9954792371276795 0.9981980061765912 1.1044554059305363 0.399404835506027 0.0355743597404101 0.6422054816088963 3.428769449128465 0.0108158619176257 0.11287457420321906 4.031477812119174e-05 4.394535726066966 0.1062573997539451 GYGFVHFETQEAAER ddPTM_KYSE-520_SHP099_60min_R1 3 GYGFVHFETQEAAER 15 0 P11940;P11940-2;E7ERJ7;E7EQV3;A0A087WTT1;H0YAR2;H0YBN4;E5RGH3 P11940 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein 0 ;; 192.65 6.805e-11 1104280000.0 1711160.0 1433620.0 968540.0 1299080.0 1435200.0 1396150.0 1221720.0 1319080.0 1107040.0 1144050.0 False True 1616238.5436871094 1364746.7432925075 1030973.638118791 1422544.1726173575 1548142.0748290345 1387436.1099744516 1345223.3804381741 1314504.4193555864 906029.4422073849 1133914.6070574322 1.4253617808851877 1.2035710050813233 0.9092162952148766 1.2545425940926311 1.365307462478629 1.223580771725766 1.1863533391893586 1.1592622682291696 0.7990279308232732 1.0 20.11288056708802 -7.652248667449362 5.528491957902547 0.9032973968174285 1.2144742768814214 0.46872710224368475 0.13565703905969523 0.18788643767739785 8.183582959728533 0.10144821846454628 0.03623666139812014 2.2271595616355898e-08 7.652248667449362 0.3111768800639929 GYIWNYGAIPQTWEDPGHNDK ddPTM_KYSE-520_SHP099_60min_R1 4 GYIWNYGAIPQTWEDPGHNDK 21 0 Q15181;Q5SQT6 Q15181 PPA1 Inorganic pyrophosphatase 0 ;;; 201.52 2.1065e-13 3673944000.0 1809982.0 1945860.0 1356596.0 1288100.0 2196680.0 1989341.0 1502404.0 1350834.0 1434080.0 1397096.0 False True 1709578.6903503346 1852377.9648045949 1444044.348790346 1410520.636718612 2369546.2186005046 1976924.784910425 1654281.6583700322 1346148.272141027 1173687.2222148834 1384718.8163642404 1.234603495054004 1.337728600863715 1.0428430174595824 1.0186332561162978 1.7112111069755351 1.4276723631885777 1.1946697328151894 0.9721455765839268 0.8475996775262664 1.0 20.401161618940606 -7.213374957771272 3.2445496916159655 0.9223480270311734 1.292755380904235 0.41873567866842776 0.18714410867899686 0.27093836609825955 5.727789827484574 0.11482730561710766 0.05709454997575381 6.11821933596281e-08 7.213374957771272 0.37040735387306156 GYIYWR ddPTM_KYSE-520_SHP099_60min_R1 1 GYIYWR 6 0 P63010-2;A0A087WYD1;A0A087X253;A0A087WU93;P63010;A0A087WZQ6;C9J1E7;Q10567-4;Q10567-3;Q10567-2;Q10567;P63010-3 P63010-2 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 0 123.07 0.059733 841370000.0 429000.0 343880.0 276880.0 224330.0 338780.0 355330.0 287910.0 311760.0 310890.0 291970.0 False True 405202.51480970246 327359.4886255969 294728.1278236638 245650.25575272614 365440.05860547756 353112.25366702874 317014.75253082125 310678.5773253311 254440.21289913077 289383.3729492231 1.4002273547374875 1.131231159860167 1.0184694608400273 0.8488748100804996 1.2628232744719574 1.2202230213447263 1.095483646140397 1.0735882098514506 0.8792495930433997 1.0 18.142622506006457 -4.2904073298558165 3.131019830461387 1.0610414573925466 1.440359802009607 0.41963557257629447 0.12301604257324757 0.34185524757341185 5.325034202605945 0.033348848703819635 0.30721167663376797 5.1238059082846694e-05 4.2904073298558165 0.37931834461706027 GYLPSHYER ddPTM_KYSE-520_SHP099_60min_R1 3 GYLPSHYER 9 0 Q6P2Q9;I3L1T8 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 ;; 159.37 0.00025319 792270000.0 824460.0 825640.0 590570.0 466461.0 733205.0 710860.0 554989.0 549776.0 593174.0 625150.0 False True 778725.5602797361 785975.0150890942 628639.0871454093 510793.31319338665 790904.062134214 706423.259059871 611092.7042906728 547868.955374683 485468.5542996851 619611.6573593405 1.2567961739107796 1.2684961713579772 1.0145694963592873 0.8243765383147961 1.2764512299605322 1.1401064693819738 0.9862511413923783 0.8842134405759725 0.7835045524621888 1.0 19.241004761650643 -6.984245903087419 2.9737724435697097 0.8778244049849385 1.1235608065014138 0.3862598577872116 0.1372004919084265 0.2995858270378994 5.395844031901371 0.07378394613330123 0.043162428907129756 1.0369411202486439e-07 6.984245903087419 0.24573640151647524 GYNGLNQCLTT(ph)T(ph)QS(ph)KIFQCDKY(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 1 GYNGLNQCLTTTQSKIFQCDKYVK 24 2 Q14593-2;Q14593 Q14593-2 ZNF273 Zinc finger protein 273 4 GY(0.035)NGLNQCLT(0.395)T(0.896)T(0.896)QS(0.886)KIFQCDKY(0.892)VK 44.05 0.065352 29216000.0 7224.4 6806.8 6777.1 6147.9 6187.2 4965.3 7217.4 8963.1 8978.6 8213.5 True False 6823.648130515646 6479.7911107848995 7213.962709743389 6732.1945675664665 6674.097439647581 4934.309720915484 7947.005227036046 8932.009098103263 7348.312572087028 8140.734780006305 0.8382103477040632 0.7959712834152645 0.8861562137438657 0.8269762803353793 0.8198396852381441 0.6061258417402541 0.9762024487708333 1.0971993732114123 0.9026596211111715 1.0 12.990943302203894 -6.969989562372385 24.994634274316784 1.0072979504996185 0.8012961856813655 0.5862202765104991 0.08171397185375617 137.50446164459694 114522.35522969489 0.034010225422056735 0.022929404559036037 1.0715450579338858e-07 6.969989562372385 -0.20600176481825294 GYPHWPAR ddPTM_KYSE-520_SHP099_60min_R1 3 GYPHWPAR 8 0 P51858;H3BPQ6;M0R0J3;Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;O75475;O75475-3;O75475-2;Q9Y3E1 P51858;Q7Z4V5-2;O75475;Q9Y3E1 HDGF;HDGFRP3;HDGFRP2;PSIP1 Hepatoma-derived growth factor;Hepatoma-derived growth factor-related protein 2;PC4 and SFRS1-interacting protein;Hepatoma-derived growth factor-related protein 3 0 ;; 101.69 0.0025833 475420000.0 826520.0 696680.0 566070.0 463760.0 843360.0 697620.0 564610.0 560650.0 552930.0 544740.0 False True 780671.2879732278 663210.4470620011 602559.7779440235 507835.61096547166 909727.6339379993 693265.894811 621686.288862585 558705.2360066936 452531.85023100185 539914.0274013066 1.445917772743792 1.2283630604193414 1.1160291219775138 0.940586065914543 1.6849490618287237 1.2840301596678285 1.1514542266198593 1.0348040755596444 0.8381553863475464 1.0 19.042370174090085 -7.227031697501924 2.207410823938349 0.9272105309980684 1.2728589169115523 0.37700075650799425 0.18858225076221388 0.37846121582094394 3.5113376974704726 0.13223380345036634 0.05743062326893922 5.92882050795607e-08 7.227031697501924 0.3456483859134839 GYPS(ph)LMR ddPTM_KYSE-520_SHP099_60min_R1 2 GYPSLMR 7 0 Q14134-2;Q14134;E9PRL4;H0YD78;E9PIQ2;E9PPX1 Q14134-2 TRIM29 Tripartite motif-containing protein 29 1 GY(0.149)PS(0.851)LMR;GY(0.182)PS(0.818)LMR 100.82 0.0079994 765100000.0 925470.0 927780.0 733320.0 734150.0 849220.0 841700.0 732390.0 826530.0 1073090.0 849340.0 True False 874132.3342212933 883208.0561738281 780590.980553486 803923.395269754 916048.7825991609 836446.6380872389 806427.1286375888 823662.9603435515 878243.9063975308 841815.5083765215 1.0383894398751292 1.049170569305778 0.9272708482870436 0.9549876276574613 1.0881823552595289 0.993622272058593 0.9579618344081344 0.978436429535519 1.0432736123990671 1.0 19.68314456246195 GYRDDRS(ph)PAREPGDVSAR ddPTM_KYSE-520_SHP099_60min_R1 7 GYRDDRSPAREPGDVSAR 18 3 A0A1W2PR91;A0A1W2PQT1;C9J366;P0DPB3-2;P0DPB3;B3KU38-2;B3KU38 A0A1W2PR91 IQCJ-SCHIP1 1 GYRDDRS(1)PAREPGDVSAR;GYRDDRS(1)PAREPGDVSAR;GYRDDRS(1)PAREPGDVSAR;GYRDDRS(1)PAREPGDVSAR;GYRDDRS(1)PAREPGDVSAR;GYRDDRS(1)PAREPGDVSAR;GYRDDRS(1)PAREPGDVSAR 192.27 1.9763e-12 11968330000.0 2481464.0 2146891.0 2323630.0 1846357.0 2063378.0 1888493.0 1790185.0 1916964.0 2649970.0 1830913.0 True False 2343812.2452441542 2043751.1338109097 2473414.907739452 2021834.2141525273 2225754.1095851376 1876706.214686091 1971154.370321934 1910314.499306762 2168802.2483074707 1814692.535248761 1.2915754044928942 1.1262244672928843 1.3629939285557222 1.1141469835138607 1.2265185789613817 1.0341731054890955 1.0862194735659312 1.05269320405558 1.1951348265231982 1.0 20.791293701320622 -5.961597638730493 1.5773278705742417 1.078629423302277 1.237691790615094 0.4281239841338992 0.08441134566943881 0.37299070192383343 1.9006735291056325 0.03118224079389598 0.03574242690483919 1.0924519928983145e-06 5.961597638730493 0.15906236731281687 GYSDRDGYGR ddPTM_KYSE-520_SHP099_60min_R1 4 GYSDRDGYGR 10 1 P38159;P38159-2;H3BT71;H3BUY5;H0Y6E7 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 0 ;;; 166.66 6.231e-05 2011240000.0 1175410.0 1476890.0 1028840.0 666170.0 1053460.0 1065080.0 731110.0 711890.0 1170040.0 804130.0 False True 1110207.6641782573 1405937.9875429147 1095160.6726022041 729482.5965086863 1136361.3086325228 1058432.4406486335 805017.7337459928 709420.6197463754 957590.2303081445 797006.0338036735 1.3929727217745693 1.7640242707237013 1.3740933269671771 0.9152786372610823 1.4257875855836277 1.3280105742704542 1.010052245030171 0.8901069623785646 1.201484292080062 1.0 19.604231120742504 -4.940477159044353 0.4355076874757884 1.0105219466434363 1.7948389569041847 0.43163219281423026 0.19905153032363837 2.887479745659855 0.6564008929849202 0.17141178917521524 1.1099127775750552 1.146892838651209e-05 4.940477159044353 0.7843170102607484 GYSFTTTAER ddPTM_KYSE-520_SHP099_60min_R1 8 GYSFTTTAER 10 0 P60709;A0A2R8Y793;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;;;;;;; 219.19 2.5255e-08 22065170000.0 7788860.0 9240220.0 6431190.0 5081750.0 6673960.0 8755670.0 6451800.0 7362540.0 7844020.0 8544690.0 False True 7356796.409092524 8796305.96134701 6845754.797667831 5564717.992116147 7199162.682362028 8701022.615779128 7104010.907500083 7337001.067169761 6419743.699652738 8468990.694268217 0.8686745179766908 1.0386486747825001 0.8083318360830192 0.6570697965086121 0.8500614703986387 1.027397824591772 0.8388261557906838 0.8663371270599479 0.7580293722600968 1.0 23.013758613599677 -10.138623655491791 4.82891414880572 1.0000097233953553 0.8596118591634364 0.1376802699068551 0.10715822763719346 1.1881731022413578e-05 2.1195433738530417e-06 0.10989965573679777 0.026652736117397942 7.26735448336983e-11 10.138623655491791 -0.1403978642319189 GYSSLDQSPDEKPLVALDT(ph)DS(ph)DDDFDMSR ddPTM_KYSE-520_SHP099_60min_R1 2 GYSSLDQSPDEKPLVALDTDSDDDFDMSR 29 1 Q5T586;A0A0A0MRW2;Q5T593;A0A0A0MRW3;Q8IW50-5;Q8IW50-6;Q8IW50;A0A0A0MRW1;A0A0A0MRW0;Q8IW50-3;Q8IW50-2;Q8IW50-4 Q5T586 FAM219A Protein FAM219A 2 GYSSLDQSPDEKPLVALDT(1)DS(1)DDDFDMSR;GYSSLDQSPDEKPLVALDT(1)DS(1)DDDFDMSR 157.08 1.4849999999999999e-07 408230000.0 503200.0 511820.0 421060.0 522710.0 498810.0 505590.0 464830.0 498930.0 587130.0 464100.0 True False 475286.4928956697 487231.3989425181 448202.20131981967 572388.2012415082 538063.5091593314 502434.4252709122 511819.55270362756 497199.3282811375 480521.99234284373 459988.4350643364 1.0332574835912856 1.0592253235113864 0.9743771085399826 1.244353461107019 1.1697326892231 1.0922762116848417 1.1126791755797987 1.0808952799250193 1.0446392902804946 1.0 18.81123806411718 -7.912814234192777 1.9115389059982792 1.0008086301028394 1.0999314052564597 0.16983392971662792 0.06920628682933871 0.6111477828732458 4.898608437860661 0.07067680397891057 0.020138285804427173 1.2223223864680375e-08 7.912814234192777 0.09912277515362033 GYSSLDQSPDEKPLVALDTDS(ph)DDDFDMSR ddPTM_KYSE-520_SHP099_60min_R1 1 GYSSLDQSPDEKPLVALDTDSDDDFDMSR 29 1 Q5T586;A0A0A0MRW2;Q5T593;A0A0A0MRW3;Q8IW50-5;Q8IW50-6;Q8IW50;A0A0A0MRW1;A0A0A0MRW0;Q8IW50-3;Q8IW50-2;Q8IW50-4 Q5T586 FAM219A Protein FAM219A 1 GYSSLDQSPDEKPLVALDT(0.325)DS(0.675)DDDFDMSR 99.236 2.228e-06 0.0 161050.0 153540.0 143750.0 159520.0 136290.0 137420.0 132880.0 148870.0 168680.0 144030.0 True False 152116.23545478444 146163.70793176143 153016.35500813217 174680.7328385633 147015.24761597635 136562.3108066393 146312.80718382652 148353.6047165191 138051.96407676453 142754.00625364433 1.065582952428707 1.0238851557837105 1.0718883415170415 1.223648550557606 1.029850240102969 0.956626818332484 1.0249296045944865 1.0392255083400281 0.9670619249135101 1.0 17.123171708439376 -5.986241059974301 24.999199012686585 1.000786854194804 1.0940179593755377 0.4350160557363404 0.05307491988496924 248.76166648078487 451982.8962511757 0.017331037629982195 0.019642607734891245 1.032188319139786e-06 5.986241059974301 0.09323110518073374 GYSTWLK ddPTM_KYSE-520_SHP099_60min_R1 1 GYSTWLK 7 0 A0A2R8Y7M3;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y5P0;E9PNV3;E9PQ82 A0A2R8Y7M3 RDX Radixin 0 105.12 0.030481 151290000.0 331830.0 284220.0 156140.0 179310.0 261850.0 291270.0 222270.0 239120.0 229480.0 210020.0 False True 313422.728413295 270565.64457708236 166205.03423283302 196351.56848848274 282456.1052773013 289452.07588887954 244739.22074615504 238290.54853102769 187812.21672003766 208159.38619308753 1.5056862635181185 1.2998003574343129 0.7984508278606381 0.9432751127847201 1.3569222625171296 1.390530982928559 1.17572993090562 1.1447504380609128 0.9022519721778198 1.0 17.667329087485758 -7.6499585671344965 4.509360992265554 0.9528928533248971 1.1975681097288577 0.2049647991079946 0.19947515797802715 0.39444703359330824 13.27531204590681 0.1659110989282725 0.056588616280498556 2.2389347287944573e-08 7.6499585671344965 0.2446752564039606 GYT(ph)SDDDTWEPEIHLEDCK ddPTM_KYSE-520_SHP099_60min_R1 5 GYTSDDDTWEPEIHLEDCK 19 0 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GY(0.001)T(0.834)S(0.16)DDDT(0.005)WEPEIHLEDCK;GYT(0.576)S(0.422)DDDT(0.001)WEPEIHLEDCK;GY(0.002)T(0.44)S(0.44)DDDT(0.118)WEPEIHLEDCK;GY(0.001)T(0.495)S(0.495)DDDT(0.009)WEPEIHLEDCK;GYT(0.499)S(0.499)DDDT(0.002)WEPEIHLEDCK 215.08 1.7887e-18 3024200000.0 3117640.0 3196400.0 2612790.0 2912860.0 3054700.0 2860370.0 3048870.0 3300370.0 3510490.0 3426620.0 True False 2944698.2943387395 3042840.146105787 2781214.6240118123 3189697.338616707 3295087.511134512 2842517.369829623 3357079.5337037407 3288921.7867821464 2873073.508251372 3396262.8126700167 0.8670407612017887 0.8959377745309463 0.8189044185969 0.9391785955778506 0.9702098138112095 0.8369544780885024 0.9884628248379072 0.9683943699859073 0.8459514668691577 1.0 21.695516672462812 -1.0000000162203906 0.062790897702338 1.0952810068246994 0.5206993265463035 0.24139492941046614 0.05632895431758038 457.7060966146723 2.1452809992491653 3.8176159604244395 23.79143469197506 0.09999999626511712 1.0000000162203906 -0.574581680278396 GYT(ph)SDSEVYTDHGRPGK ddPTM_KYSE-520_SHP099_60min_R1 5 GYTSDSEVYTDHGRPGK 17 1 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GY(0.001)T(0.499)S(0.499)DS(0.001)EVYTDHGRPGK;GY(0.001)T(0.84)S(0.154)DS(0.006)EVYTDHGRPGK;GY(0.001)T(0.872)S(0.124)DS(0.003)EVYTDHGRPGK;GYT(0.5)S(0.5)DSEVYTDHGRPGK;GYT(0.5)S(0.5)DSEVYTDHGRPGK 216.35 8.7496e-18 27959500000.0 11315300.0 11011800.0 10045500.0 11398700.0 10850800.0 10222700.0 10191700.0 10537800.0 12130600.0 9979200.0 True False 10687617.752508668 10482776.598951228 10693049.003368301 12482029.020855876 11704696.227393322 10158896.337381987 11221976.497406725 10501246.831341008 9927988.827540925 9890792.051700111 1.0805623752519993 1.05985208708835 1.08111149718594 1.2619847789349046 1.18339321726832 1.0271064525753315 1.134588255293245 1.0617195040043297 1.0037607479407495 1.0 23.237654625526513 -7.547446808326749 1.5532264404830363 0.9932081709800166 1.121891161491378 0.3498943179535554 0.06331067370692249 0.4909481486473224 2.1183499759381217 0.06249848491665689 0.02030695624081232 2.8350008384626814e-08 7.547446808326749 0.12868299051136145 GYTS(ph)DDDTWEPEIHLEDCK ddPTM_KYSE-520_SHP099_60min_R1 6 GYTSDDDTWEPEIHLEDCK 19 0 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 GYT(0.169)S(0.828)DDDT(0.004)WEPEIHLEDCK;GYT(0.197)S(0.801)DDDT(0.002)WEPEIHLEDCK;GYT(0.199)S(0.8)DDDTWEPEIHLEDCK;GYT(0.158)S(0.842)DDDTWEPEIHLEDCK;GYT(0.16)S(0.84)DDDTWEPEIHLEDCK;GYT(0.169)S(0.817)DDDT(0.014)WEPEIHLEDCK 263.02 2.6648e-35 7020740000.0 5667240.0 5954930.0 4654010.0 5363640.0 5660210.0 5520260.0 5831200.0 6179990.0 6306460.0 6421290.0 True False 5352866.8998371465 5668846.224267834 4954014.93127928 5873398.732962837 6105636.324810523 5485806.009703518 6420674.60302776 6158553.057110505 5161365.836919335 6364402.36628802 0.8410635581733588 0.8907114758010086 0.7783943638636827 0.9228515726903112 0.9593416590302067 0.8619514754066475 1.0088417157654601 0.9676561447045067 0.810974155917432 1.0 22.601593617045022 -5.406215699090055 7.690020301988915 0.9339105318256719 0.8424126556683742 0.3363326608456372 0.06204992106565245 0.3277247035243755 19.68714841284419 0.01707944368488739 0.02536544565072123 3.924499706229206e-06 5.406215699090055 -0.09149787615729765 GYTS(ph)DSEVYTDHGRPGK ddPTM_KYSE-520_SHP099_60min_R1 9 GYTSDSEVYTDHGRPGK 17 1 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 GYT(0.159)S(0.84)DS(0.001)EVYTDHGRPGK;GYT(0.413)S(0.587)DSEVYTDHGRPGK;GYT(0.093)S(0.906)DS(0.001)EVYTDHGRPGK;GYT(0.027)S(0.972)DS(0.001)EVYTDHGRPGK;GYT(0.413)S(0.587)DSEVYTDHGRPGK;GYT(0.11)S(0.889)DSEVYTDHGRPGK;GYT(0.001)S(0.999)DSEVYTDHGRPGK;GYT(0.072)S(0.928)DS(0.001)EVYTDHGRPGK;GYT(0.085)S(0.914)DS(0.001)EVYTDHGRPGK 269.99 6.7063e-30 70644600000.0 13872440.0 12680070.0 12059140.0 12901970.0 12267590.0 12229190.0 11583780.0 11795180.0 14857240.0 11459870.0 True False 13102908.099176483 12070900.404026892 12836491.459706208 14128169.349681262 13232979.539960923 12152863.089022292 12754781.529198255 11754265.273595713 12159539.736541802 11358344.46744394 1.1535931258937366 1.0627341368828291 1.130137538661469 1.2438581511747935 1.1650447455516242 1.0699502135945653 1.1229437147074453 1.0348572635111208 1.0705380323157396 1.0 23.43724923473524 -7.213271711208703 0.9661096274062662 1.0178517457833294 1.1456813461297206 0.4885191196006494 0.04868908757443756 0.5410579333327715 0.9042894499813425 0.04641771300985223 0.01944811421675725 6.119674017599967e-08 7.213271711208703 0.12782960034639124 GYVLGETSNLPS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 2 GYVLGETSNLPSPGK 15 0 B1AKT1;Q9H040 B1AKT1 SPRTN SprT-like domain-containing protein Spartan 1 GYVLGETSNLPS(1)PGK;GYVLGETSNLPS(1)PGK 204.13 9.6194e-12 1255660000.0 1914740.0 2466540.0 1634020.0 1354510.0 1398530.0 2316850.0 1451140.0 1860610.0 1935100.0 2422780.0 True False 1808525.555260439 2348043.716047982 1739351.5437244412 1483242.2231517192 1508586.3544527956 2302389.6797581264 1597835.392961604 1854155.9781796376 1583734.619901277 2401316.054094318 0.7531393263193519 0.9778153575596579 0.7243326178404518 0.6176788851358177 0.6282331523501912 0.958803267829939 0.6653998711403464 0.7721415825368945 0.6595277690335517 1.0 21.19539386863033 -8.775161350525337 15.493371066959023 1.0000027932872708 0.7534005801073784 0.2788600540182451 0.1201632178419497 0.0 0.0 0.11891282220358822 0.028840595657981607 1.6781804191374923e-09 8.775161350525337 -0.2466022131798924 GYWGNK ddPTM_KYSE-520_SHP099_60min_R1 1 GYWGNK 6 0 P15880;H0YEN5;E9PPT0;E9PMM9;I3L404;E9PM36 P15880 RPS2 40S ribosomal protein S2 0 113.97 0.065585 1952600000.0 2291000.0 2354200.0 1711700.0 1319900.0 2266600.0 2094400.0 1488500.0 1575500.0 1847300.0 1666800.0 False True 2163913.663004726 2241100.6982737584 1822038.9208168343 1445342.899157596 2444968.5248101284 2081328.0727217654 1638972.1063600655 1570034.958224464 1511876.886643393 1652033.448750779 1.3098485776065953 1.3565710185640705 1.1029067977979554 0.874887188422561 1.4799751946057413 1.2598583123698899 0.9920937784882079 0.9503651148296544 0.9151611838044995 1.0 20.65581146664954 -6.814591384284408 5.60943431906464 0.9558116456803238 1.2257691996546223 0.42296770911998116 0.15246453560267498 0.2151883309465567 14.390903057284293 0.06881108837780289 0.04665148101933196 1.5325286976049366e-07 6.814591384284408 0.26995755397429844 GYY(ph)SPYSVSGSGSTAGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 GY(0.02)Y(0.508)S(0.461)PY(0.01)S(0.001)VS(0.002)GS(0.02)GS(0.055)T(0.285)AGS(0.637)R 83.25200000000001 0.008638700000000001 1063200000.0 1565900.0 1461100.0 1258800.0 1225200.0 1113300.0 1033000.0 1031100.0 1087200.0 1375000.0 1099300.0 True False 1479036.4054557397 1390906.5628441887 1339944.2621512117 1341642.6396301868 1200910.3761894964 1026552.6638281061 1135333.6505662512 1083428.7569543875 1125334.660929282 1089561.0572424587 1.3574607826008336 1.2765751433558 1.2298019034770216 1.231360675670361 1.1021964929885149 0.9421708466950729 1.0420101223511395 0.9943717699459714 1.0328330417547795 1.0 20.055315614344064 -5.783649635179521 1.785636021032347 1.002581856952764 1.2892795531902064 0.9147678056606084 0.039294227897227106 0.09468986276380165 0.6238082538838107 0.014214896348403977 0.018483942255435485 1.645698846825925e-06 5.783649635179521 0.28669769623744235 GYYS(ph)PGIVSTR ddPTM_KYSE-520_SHP099_60min_R1 4 GYYSPGIVSTR 11 0 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 GYYS(1)PGIVSTR;GYYS(1)PGIVSTR;GYYS(1)PGIVSTR;GYYS(1)PGIVSTR 135.02 0.00011608 2344240000.0 2925290.0 2960690.0 2799420.0 2424360.0 2427410.0 2599960.0 2426100.0 2589810.0 3068020.0 2718830.0 True False 2763018.332278957 2818454.0083137103 2979875.092430365 2654770.445489586 2618433.3569263895 2583732.685233808 2671353.864454257 2580826.5535762007 2510944.9064903692 2694743.281417729 1.0253363841119991 1.0459081678574207 1.105810380149691 0.9851663658635739 0.9716819316268257 0.9588047600120494 0.991320354289494 0.9577263152942734 0.9317937347892147 1.0 21.361716408436745 -5.418469058876525 5.964388585445969 0.9680258824973768 1.0572940373563304 0.7137719266642654 0.025718480411846385 0.12340977120112698 5.929501151260752 0.0073490619866289535 0.010939286778226066 3.815319753925773e-06 5.418469058876525 0.08926815485895367 GYYS(ph)PYSVS(ph)GSGSTAGSR ddPTM_KYSE-520_SHP099_60min_R1 3 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 GYYS(1)PYSVS(1)GSGSTAGSR;GYYS(0.999)PY(0.001)S(0.071)VS(0.921)GS(0.008)GSTAGSR;GYYS(0.995)PY(0.004)S(0.001)VS(0.965)GS(0.035)GSTAGSR 248.18 1.9410000000000001e-22 418380000.0 1561620.0 1365700.0 1106200.0 946420.0 1018660.0 882550.0 843560.0 781090.0 1098680.0 704360.0 True False 1474993.825587708 1300089.722042508 1177507.4219825794 1036367.4722484516 1098822.7466174373 877041.6780846991 928835.2771522319 778380.5810977774 899187.4074689343 698119.9183837876 2.1128086833598094 1.8622727812326803 1.686683606891805 1.4845121088189812 1.5739742094185107 1.256290867785483 1.3304809857059683 1.1149668711641987 1.288012823857879 1.0 19.41311534869104 -1.00000000000031 0.22163061161452222 1.0005269218478634 7.130575564868845 0.9445854472229163 0.07701127665452145 9.780599392202292 0.12546331680649572 0.11173600507335459 21.50238922716682 0.09999999999992863 1.00000000000031 6.130048643020982 up GYYS(ph)PYSVSGS(ph)GSTAGSR ddPTM_KYSE-520_SHP099_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 GYY(0.001)S(0.998)PY(0.001)S(0.004)VS(0.012)GS(0.984)GSTAGSR 251.35 4.3718999999999995e-28 211510000.0 334830.0 292440.0 258110.0 239700.0 236980.0 230110.0 210750.0 225070.0 259030.0 221950.0 True False 316256.3124329429 278390.74343861087 274748.1835906018 262481.0159315669 255628.97776824495 228673.79813502927 232054.66672178963 224289.28470173274 211996.68161491767 219983.69567448722 1.4376352368446048 1.2655062575662395 1.2489479402016699 1.1931839545052625 1.1620360180988256 1.039503393348755 1.0548721168188937 1.0195723097297926 0.9636926998835948 1.0 17.747037075272083 -4.287740652534436 0.34792615249721226 0.9644453896565129 1.7456068317572608 0.9502272569815492 0.03171078868398016 1.2989231975797824 0.12787938762536388 0.031055135471942462 0.4310058951158605 5.1553641535606064e-05 4.287740652534436 0.7811614421007479 GYYS(ph)PYSVSGSGS(ph)TAGSR ddPTM_KYSE-520_SHP099_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 GYY(0.006)S(0.947)PY(0.037)S(0.036)VS(0.007)GS(0.088)GS(0.537)T(0.209)AGS(0.134)R 114.55 9.2104e-05 1202800000.0 1480400.0 1329300.0 1505800.0 1532600.0 1015000.0 921720.0 1060700.0 1060500.0 1867200.0 761050.0 True False 1398279.260895763 1265438.4326800217 1602866.2773651842 1678257.8432070068 1094874.7254399883 915967.2035853257 1167925.9074344123 1056821.3730225596 1528163.5482815697 754307.6890879412 1.853725318094622 1.6776157143646593 2.1249502034153513 2.224898231166442 1.4514961749413402 1.2143150823410702 1.5483415114680732 1.4010481244071604 2.025915379610307 1.0 19.524793606648558 -5.781410333384182 24.883170748864767 1.454352491906923 1.960438124435926 0.459706537465021 0.2812119040079054 218.5924505170582 272357.9307529637 0.08751205346075416 0.09935678344666003 1.654206285238224e-06 5.781410333384182 0.5060856325290028 GYYS(ph)PYSVSGSGST(ph)AGSR ddPTM_KYSE-520_SHP099_60min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 GYYS(1)PYSVSGS(0.005)GS(0.378)T(0.558)AGS(0.059)R;GYYS(1)PYSVSGS(0.002)GS(0.043)T(0.728)AGS(0.227)R 289.4 1.6452999999999999e-37 1132640000.0 1375460.0 1244740.0 1018790.0 1060510.0 960600.0 910200.0 813600.0 928270.0 1113110.0 793000.0 True False 1299160.4918884672 1184940.8220071686 1084462.8335216334 1161300.5515460412 1036193.7549336485 904519.1041784541 895846.6279708093 925050.0480298469 910997.2832196318 785974.6369446638 1.6529292814571241 1.5076069459612775 1.379768229846817 1.4775292954240735 1.318355206679018 1.1508247997602197 1.1397907589655225 1.176946436370789 1.1590670237922323 1.0 19.584123232538328 -2.5362614201368947 0.20640250639360844 0.9778586582567816 2.9447997050260937 0.9165937245238667 0.05619860431592491 7.956028966847547 0.16897152214522665 0.11359373899246711 4.497005202984449 0.0029089655620828363 2.5362614201368947 1.966941046769312 GYYS(ph)PYSVSGSGSTAGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 GYYS(0.999)PYSVS(0.002)GS(0.013)GS(0.082)T(0.04)AGS(0.863)R;GYYS(0.997)PYS(0.003)VSGSGS(0.041)T(0.028)AGS(0.932)R 186.6 2.2022e-12 839830000.0 1086750.0 1020900.0 916150.0 822580.0 783390.0 725200.0 693050.0 797750.0 1024110.0 681050.0 True False 1026465.8111175848 971854.4315978597 975206.4948918276 900757.7558823046 845038.3361206239 720673.7578007192 763110.2575161868 794982.7914462496 838157.4397122102 675016.4268488827 1.5206530838209984 1.4397493052645824 1.4447152041088758 1.334423460014491 1.2518781803065724 1.0676388442352054 1.130506202757975 1.177723622456708 1.2416845077754681 1.0 19.364563085704066 -5.648675012481352 1.4612047556597922 1.13440387055344 1.4772745687519864 0.8405785264392264 0.0654182847798962 0.15733607759104246 0.6944418109473396 0.023994732036883914 0.03686959814636971 2.2455616746521402e-06 5.648675012481352 0.3428706981985463 GYYS(ph)PYSVSGSGSTAGSR ddPTM_KYSE-520_SHP099_60min_R1 9 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 GY(0.001)Y(0.055)S(0.855)PY(0.002)S(0.086)VS(0.001)GSGSTAGSR;GYYS(0.975)PY(0.003)S(0.022)VSGSGSTAGSR;GYYS(0.895)PYS(0.103)VS(0.002)GSGSTAGSR;GYYS(0.626)PYS(0.347)VS(0.027)GSGSTAGSR;GYYS(0.979)PYS(0.021)VSGSGSTAGSR;GYYS(0.958)PYS(0.042)VSGSGSTAGSR;GYYS(0.981)PYS(0.019)VSGSGSTAGSR;GYYS(0.831)PYS(0.169)VSGSGSTAGSR;GYYS(0.969)PYS(0.031)VSGSGSTAGSR 452.9 4.9928e-120 31059900000.0 11984360.0 12052380.0 9155770.0 8417930.0 7808540.0 8501080.0 7951390.0 8224420.0 10328620.0 7729350.0 True False 11319563.660570625 11473365.573808812 9745965.583949951 9217967.53625706 8423027.673484888 8448021.606404485 8755194.099288126 8195891.406614062 8453202.971321756 7660873.972343299 1.4775812396125623 1.497657527748019 1.2721741173571177 1.203252731938296 1.099486521236749 1.1027490645196472 1.1428453373460337 1.0698376498820164 1.103425405748595 1.0 22.869077557249973 -5.023583299115059 1.2111034543768053 1.0898254991519325 1.5305923975502873 0.9301065460177058 0.042618421469276954 0.1277445913961194 0.32960465824567686 0.013544327290439355 0.05082910415682254 9.471455014477801e-06 5.023583299115059 0.4407668983983548 GYYSPYS(ph)VSGSGSTAGSR ddPTM_KYSE-520_SHP099_60min_R1 3 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 GYYS(0.281)PYS(0.702)VS(0.017)GSGSTAGSR;GYYS(0.303)PYS(0.689)VS(0.006)GS(0.002)GSTAGSR;GYYS(0.033)PYS(0.967)VSGSGSTAGSR 316.8 1.0454999999999999e-47 20134400000.0 3757810.0 3640910.0 2729770.0 2238000.0 2264170.0 2503100.0 2363330.0 2599070.0 3173850.0 2358670.0 True False 3549356.7882914874 3465995.218482671 2905735.3419864266 2450698.8471207633 2442347.297634937 2487477.224422199 2602238.460278093 2590054.4327974957 2597558.8462475683 2337774.0188174937 1.5182634248313032 1.4826049013222675 1.2429496258394652 1.0483044243773356 1.0447319877694334 1.0640366452872247 1.1131266064777177 1.1079147992702956 1.1111248672194074 1.0 21.15670404765897 -4.898122108396455 2.4346421922725345 1.0750766016864175 1.5188455778111971 0.9595588203565726 0.035144026347149394 0.05298484365360601 0.6242984433300596 0.01042251536763823 0.02849685420410011 1.2643807978960331e-05 4.898122108396455 0.4437689761247796 GYYSPYSVS(ph)GSGS(ph)TAGSR ddPTM_KYSE-520_SHP099_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 GYYSPYS(0.075)VS(0.925)GSGS(0.496)T(0.07)AGS(0.434)R 359.69 3.8755999999999993e-72 1416900000.0 1316100.0 1082000.0 1076500.0 1013600.0 891200.0 940990.0 788640.0 913010.0 1126400.0 793360.0 True False 1243093.3094196932 1030019.0958848895 1145892.9124609006 1109932.2392500467 961332.3697656336 935116.9323674822 868363.4275846853 909842.9814081353 921874.1542332694 786331.4476247391 1.5808770120725661 1.309904492560045 1.4572645109416442 1.4115323030800868 1.2225536351999113 1.1892147200676983 1.1043223951016319 1.1570731199375095 1.1723735035880383 1.0 19.584778027444447 -5.908090817841331 1.4621140927934615 1.1230206338918485 1.4468436843076473 0.7905376287083582 0.07710708753887273 0.18086535814548638 0.8009515430433611 0.029245547814765373 0.03538414050739776 1.2356890043205304e-06 5.908090817841331 0.32382305041579884 GYYSPYSVS(ph)GSGST(ph)AGSR ddPTM_KYSE-520_SHP099_60min_R1 2 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 GYYSPYS(0.013)VS(0.982)GS(0.005)GS(0.002)T(0.947)AGS(0.051)R;GYYS(0.001)PY(0.005)S(0.208)VS(0.756)GS(0.16)GS(0.259)T(0.444)AGS(0.167)R 218.64 5.2176e-15 771230000.0 2005430.0 1721920.0 1722170.0 1552190.0 1551450.0 1543670.0 1542700.0 1615600.0 2082290.0 1555750.0 True False 1894184.8001744088 1639196.3785453853 1833183.8337694276 1699709.6709170588 1673540.2884570153 1534035.3829346888 1698651.1713010927 1609995.8606838763 1704198.626259226 1541967.2653551835 1.2284208898157731 1.0630552381848428 1.1888604090095025 1.1022994515551796 1.085328026124812 0.994855998179269 1.1016129910577692 1.0441180541618196 1.1052106387399043 1.0 20.556340707721724 -1.0000000000000924 0.27462505086909833 1.035980514872943 2.190000499479738 0.4834997353930329 0.05053174104053494 47.374428465742156 0.6647349238431461 0.0561996583259272 26.06603647425974 0.09999999999997873 1.0000000000000924 1.154019984606795 GYYSPYSVS(ph)GSGSTAGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 GYYSPYS(0.077)VS(0.922)GS(0.001)GS(0.002)T(0.001)AGS(0.997)R;GYYSPYS(0.001)VS(0.998)GSGS(0.003)T(0.027)AGS(0.97)R;GYYSPYS(0.002)VS(0.998)GSGS(0.001)T(0.001)AGS(0.999)R;GYYSPY(0.001)S(0.108)VS(0.866)GS(0.044)GS(0.139)T(0.341)AGS(0.502)R 344.46 2.7848999999999996e-59 3322910000.0 3212250.0 2903340.0 2888920.0 2594490.0 2261060.0 2536100.0 2274370.0 2382750.0 2818640.0 2275680.0 True False 3034060.0890383846 2763859.188397814 3075144.4056354347 2841069.5495381346 2438992.558328417 2520271.259181472 2504285.5153121585 2374484.796388031 2306846.0281321527 2255519.245652251 1.345171447721784 1.2253760165094763 1.3633864625908632 1.2596077621658928 1.0813441574616711 1.1173796295640386 1.1102922398642487 1.0527441966922244 1.0227560826975162 1.0 21.10502816550718 -5.720096127289915 3.601617968549689 1.069488175261314 1.3043503656862079 0.8540173777040746 0.047754378789096226 0.0856222685763277 2.299471632221922 0.014807310909876359 0.018792002984049195 1.9050390075506073e-06 5.720096127289915 0.23486219042489398 GYYSPYSVS(ph)GSGSTAGSR ddPTM_KYSE-520_SHP099_60min_R1 11 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 GYYS(0.01)PY(0.041)S(0.033)VS(0.441)GS(0.092)GS(0.338)T(0.033)AGS(0.012)R;GYYSPYS(0.044)VS(0.955)GS(0.001)GSTAGSR;GYYSPYS(0.006)VS(0.75)GS(0.23)GS(0.014)TAGSR;GYYSPYS(0.001)VS(0.999)GSGSTAGSR;GYYSPYS(0.012)VS(0.923)GS(0.065)GSTAGSR;GYYSPYS(0.039)VS(0.96)GS(0.001)GSTAGSR;GYYSPYS(0.007)VS(0.564)GS(0.429)GSTAGSR;GYYSPYS(0.012)VS(0.862)GS(0.126)GSTAGSR;GYYSPYS(0.001)VS(0.999)GS(0.001)GSTAGSR;GYYSPYS(0.001)VS(0.997)GS(0.002)GSTAGSR;GYYSPYS(0.001)VS(0.999)GSGSTAGSR 333.03 5.509600000000001e-59 37758070000.0 21068430.0 21032620.0 19391690.0 17053190.0 17070220.0 17266030.0 16363350.0 15523340.0 20900890.0 14911490.0 True False 19899722.18902603 20022181.36459376 20641709.36520104 18673920.050371464 18413549.19773417 17158266.302261382 18017517.1089063 15469493.156714812 17105815.244560152 14779385.799563682 1.3464512300378215 1.3547370395584948 1.3966554256815211 1.2635112381275517 1.2458940748591716 1.160959361570217 1.2190978267471855 1.0466939131646122 1.157410428048042 1.0 23.81708297954569 -6.36176013610515 0.3851768448227145 1.0086621574664028 1.425081403381451 0.8577310586594323 0.0467689614431968 0.5050079869391086 0.1599085212200895 0.04945796196220178 0.07988813108015544 4.347502735067584e-07 6.36176013610515 0.4164192459150482 GYYSPYSVSGSGS(ph)TAGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 5 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 GYYSPYS(0.001)VS(0.028)GSGS(0.964)T(0.006)AGS(1)R;GYYSPYSVSGS(0.003)GS(0.995)T(0.002)AGS(1)R;GYYSPYSVSGSGS(0.998)T(0.001)AGS(1)R;GYYSPYSVSGSGS(0.997)T(0.002)AGS(1)R;GYYSPYSVSGS(0.001)GS(0.839)T(0.221)AGS(0.939)R 316.84 1.0968e-47 18850630000.0 4688210.0 4451190.0 4531520.0 4428510.0 3282460.0 3899880.0 3772090.0 4169830.0 4625790.0 4338420.0 True False 4428145.645585064 4237348.151027594 4823629.029888361 4849394.258919918 3540770.9273573803 3875539.402332969 4153409.669250749 4155365.8329756404 3785863.1426764145 4299984.974039691 1.0298049114866954 0.9854332460717294 1.121778112949247 1.1277700476157888 0.8234379768148226 0.9012913825817467 0.9659126007011976 0.9663675240873725 0.8804363655996044 1.0 22.035900187763026 -5.752576038657146 24.99998055055798 0.9222954480637469 1.06439787908974 0.5737984699239469 0.06048935032488741 150.90773114495647 425648.9207266992 0.018874478891558317 0.023997712860734502 1.7677626810626464e-06 5.752576038657146 0.14210243102599307 GYYSPYSVSGSGS(ph)TAGSR ddPTM_KYSE-520_SHP099_60min_R1 3 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 GYYSPYSVSGS(0.021)GS(0.759)T(0.11)AGS(0.11)R;GYYSPYSVSGS(0.001)GS(0.375)T(0.375)AGS(0.25)R;GYYSPYSVS(0.002)GS(0.035)GS(0.823)T(0.07)AGS(0.07)R 190.46 1.7112e-12 171674000000.0 1367260.0 1344920.0 1279150.0 1107560.0 1211790.0 1190070.0 1237660.0 1328870.0 1503680.0 1195650.0 True False 1291415.362234764 1280308.0244339232 1361606.0557123648 1212822.1693999432 1307150.978858052 1182642.3316959478 1362774.751197582 1324260.4601305902 1230649.6166881048 1185057.4712016229 1.0897491418076937 1.0803763155349069 1.148978921951967 1.0234289887815884 1.1030274991917726 0.9979620064306027 1.149965115038478 1.1174651798007893 1.0384725185017842 1.0 20.176525595879806 -7.9777854992853 5.348145439450774 1.000148916088016 1.0876666543493005 0.28719130285259986 0.04584181369616615 0.18555081283406438 15.547962015906775 0.0431419436411887 0.01122746270197812 1.0524815725909192e-08 7.9777854992853 0.08751773826128462 GYYSPYSVSGSGSTAGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 GYYSPYSVSGSGSTAGSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 GYYSPYSVSGSGS(0.141)T(0.141)AGS(0.719)R 250.94 4.773500000000001e-24 3152700000.0 791580.0 866070.0 761850.0 681110.0 817520.0 776100.0 687620.0 762630.0 838400.0 859450.0 True False 747669.4794243916 824462.6972024278 810960.0700030995 745842.4896168115 881854.1729474865 771256.0720203223 757131.3401244935 759984.6145291806 686167.6943440798 851835.9416419823 0.8777153473745174 0.9678655911292139 0.952014384882503 0.8755705801508447 1.0352394514460632 0.9054044732295097 0.8888229565250111 0.8921725151256815 0.8055162511943749 1.0 19.700216077458094 -6.50823413947366 24.63713385696661 0.8889953501589083 0.9430655258786668 0.10773151548951809 0.061088695963184766 1076.5643667019156 1811147.4462301438 0.021035180851377903 0.017883356061426138 3.1028862902439774e-07 6.50823413947366 0.05407017571975847 HAAS(ph)DVDLEIESLLNQQSTK ddPTM_KYSE-520_SHP099_60min_R1 1 HAASDVDLEIESLLNQQSTK 20 0 F5H6D8;B4DTN4;Q86U44;H0YFV6 F5H6D8 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 HAAS(1)DVDLEIESLLNQQSTK 145.91 1.0805e-06 60778000.0 105840.0 114600.0 118000.0 207320.0 111710.0 98299.0 108280.0 117490.0 136190.0 108900.0 True False 99968.84421319085 109094.44398189316 125606.4688066754 227023.63046696925 120500.94145704531 97685.47947883725 119225.99911096273 117082.45461237227 111461.32907051557 107935.230722918 0.9261928986821942 1.0107398969846184 1.1637207607321605 2.1033320533660107 1.1164189917413057 0.9050379456695374 1.1046068861151501 1.0847473417918216 1.0326686506711553 1.0 16.719806320663896 -5.985140548268808 24.995123706457957 1.0328883289941315 1.3128853865038772 0.1560295114071396 0.3021819510375139 486.7441677749528 818749.113541372 0.10078721085353363 0.11424139127143379 1.034807223670721e-06 5.985140548268808 0.2799970575097457 HADDDRPPRR ddPTM_KYSE-520_SHP099_60min_R1 6 HADDDRPPRR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;;;;; 132.25 0.00021644 2377584000.0 473893.0 519836.0 476000.0 433040.0 542214.0 520929.0 457408.0 508276.0 562162.0 249814.0 False True 447605.2106077258 494862.2982702559 506683.7216269279 474195.9914017768 584883.1570243522 517677.688882199 503647.26451188826 506512.90918851027 460087.5517507834 247600.8423123509 1.8077693372426715 1.998629300485102 2.0463731742388074 1.915163078498634 2.36220180659368 2.0907751526513123 2.0341096573352213 2.045683304055724 1.8581824983066029 1.0 17.917656696896035 -8.320384077101528 2.0124750365099144 1.0000815151515379 2.0463201467502667 0.8428318949002244 0.1337579978446781 0.589044885647603 3.1789554996961513 0.13256536266799582 0.03669506297277184 4.782069932437646e-09 8.320384077101528 1.0462386315987289 HADGEKEDQFNGS(ph)PPRPQPR ddPTM_KYSE-520_SHP099_60min_R1 11 HADGEKEDQFNGSPPRPQPR 20 2 Q69YN4-3;Q69YN4;Q69YN4-4;Q69YN4-2 Q69YN4-3 KIAA1429 Protein virilizer homolog 1 HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR;HADGEKEDQFNGS(1)PPRPQPR 236.77 2.2338e-26 38257540000.0 5482610.0 4852227.0 5073195.0 4813888.0 5011040.0 4752501.0 4991136.0 4832430.0 5797230.0 4154930.0 True False 5178478.693987933 4619118.731578782 5400221.267098995 5271398.468171796 5405380.339082569 4722838.878408261 5495688.735673197 4815667.428227641 4744599.168275683 4118120.552686622 1.2574859399415939 1.1216569967980452 1.3113315159207621 1.2800495761914465 1.3125842893443591 1.1468432791087493 1.334513806811183 1.1693847634173666 1.1521273133153795 1.0 21.9735546329557 -8.041733535281926 1.3815766153306612 1.001900721208708 1.2486606504876365 0.5582995820591516 0.06788403863054289 0.35400474015672184 1.5079365946875634 0.06336050149253594 0.019065280173505516 9.083777013543293e-09 8.041733535281926 0.24675992927892842 HADIVTTTTHK ddPTM_KYSE-520_SHP099_60min_R1 3 HADIVTTTTHK 11 0 P34897-3;P34897-2;P34897;G3V2Y4;H0YIZ0 P34897-3 SHMT2 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase 0 ;; 127.87 0.00018767 683656000.0 712314.0 713433.0 444703.0 602294.0 749648.0 697210.0 519384.0 620906.0 659466.0 552250.0 False True 672800.5224572448 679158.6077952355 473369.2669299581 659535.8406737064 808641.0326863406 692858.4537730825 571888.4034193596 618752.2220065505 539723.5981850115 547357.4946439981 1.2291793371621502 1.240795301865668 0.864826501074655 1.2049453001509904 1.4773544540799275 1.2658243662557656 1.0448169779630339 1.1304352787002352 0.9860531799898864 1.0 19.062123880189624 -6.772465556502541 24.82678706925496 1.0511959091743006 1.2107589690070155 0.25616354579086964 0.1443031855091398 351.9492773227297 792448.3302692154 0.06598927034190022 0.044968953790041385 1.6886297778567686e-07 6.772465556502541 0.1595630598327149 HADLEIR ddPTM_KYSE-520_SHP099_60min_R1 1 HADLEIR 7 0 Q14764;H3BQK6;H3BP76;H3BUK7;H3BNF6;H3BRL2 Q14764 MVP Major vault protein 0 73.26 0.022921 0.0 20757.0 17311.0 13330.0 12177.0 17604.0 17610.0 11683.0 14768.0 10642.0 17090.0 False True 19605.567831946355 16479.353575659265 14189.273128754108 13334.298418851458 18989.33464694143 17500.089457902162 12864.031655092149 14716.77325487711 8709.681062988671 16938.59589581881 1.157449410360269 0.9728878165000142 0.8376888625258865 0.7872139167180291 1.1210689931878492 1.0331487666118746 0.7594508856703736 0.8688307664574403 0.5141914428183864 1.0 14.048026668735766 -6.769116954549344 24.707598330080334 0.7746874471462774 0.9748742250825496 0.28206693085986567 0.15487470902028105 209.8695629146051 675383.546891401 0.06443812852632425 0.04438296750886921 1.7017001825660324e-07 6.769116954549344 0.20018677793627226 HADNS(ph)SDTEMEDMIAEETLEEMDSELLK ddPTM_KYSE-520_SHP099_60min_R1 12 HADNSSDTEMEDMIAEETLEEMDSELLK 28 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7 E7EX82 PHC3 Polyhomeotic-like protein 3 1 HADNS(0.499)S(0.499)DT(0.002)EMEDMIAEETLEEMDSELLK;HADNS(0.493)S(0.493)DT(0.014)EMEDMIAEETLEEMDSELLK;HADNS(0.417)S(0.417)DT(0.166)EMEDMIAEETLEEMDSELLK;HADNS(0.483)S(0.483)DT(0.033)EMEDMIAEETLEEMDSELLK;HADNS(0.466)S(0.466)DT(0.067)EMEDMIAEETLEEMDSELLK;HADNS(0.449)S(0.449)DT(0.103)EMEDMIAEETLEEMDSELLK;HADNS(0.434)S(0.434)DT(0.132)EMEDMIAEETLEEMDSELLK;HADNS(0.333)S(0.333)DT(0.333)EMEDMIAEETLEEMDSELLK;HADNS(0.333)S(0.333)DT(0.333)EMEDMIAEETLEEMDSELLK;HADNS(0.333)S(0.333)DT(0.333)EMEDMIAEETLEEMDSELLK;HADNS(0.495)S(0.495)DT(0.009)EMEDMIAEETLEEMDSELLK;HADNS(0.477)S(0.477)DT(0.045)EMEDMIAEETLEEMDSELLK 339.45 9.014899999999999e-79 1918618000.0 709728.2 734490.0 670052.6 751657.0 648031.1 681795.6 624003.1 734406.4 979056.3 619433.6 True False 670358.1619379102 699203.997908033 713245.2627180663 823094.2552860817 699027.4607774125 677540.2607611632 687083.4230313818 731858.9156101416 801284.3559208564 613945.900216048 1.0918847437567556 1.138869072441045 1.161739597034649 1.340662516023699 1.138581527348622 1.1035830038489325 1.1191269829957275 1.1920576639612708 1.3051383772395644 1.0 19.22775200799854 -10.244667493090331 5.579441250531391 0.9999892837568831 1.1755750240471945 0.310091966242102 0.07911559894475993 1.1010628670310481e-05 1.4906986133871202e-06 0.07996105333944697 0.01939222045413185 5.692886258953334e-11 10.244667493090331 0.17558574029031138 HADNSS(ph)DTEMEDMIAEETLEEMDSELLK ddPTM_KYSE-520_SHP099_60min_R1 2 HADNSSDTEMEDMIAEETLEEMDSELLK 28 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7 E7EX82 PHC3 Polyhomeotic-like protein 3 1 HADNS(0.088)S(0.456)DT(0.456)EMEDMIAEETLEEMDSELLK;HADNS(0.172)S(0.414)DT(0.414)EMEDMIAEET(0.001)LEEMDSELLK 137.41 1.4795e-07 42400000.0 22274.1 30300.0 25534.0 25706.0 27974.0 27002.0 25040.0 24595.0 39509.0 24248.0 True False 21038.511270682488 28844.342518772763 27179.962495844502 28149.0905112093 30175.39464971256 26833.470502116652 27571.287566849893 24509.685685516146 32335.16154084001 24033.181584658523 0.8753943457953286 1.200188265426556 1.130934845230592 1.1712594278061856 1.2555721989374429 1.1165176116026885 1.1472175446154789 1.0198269255021064 1.345438240331901 1.0 14.552740028956592 -4.255841925001618 24.43157116537024 1.1563185562785225 0.8753941781456053 0.4286121588282328 0.09651013500114616 406.65884324330955 1774895.2614340093 0.022252671497312197 0.18943557380177667 5.548276229978238e-05 4.255841925001618 -0.28092437813291726 HADNSSDT(ph)EMEDMIAEETLEEMDSELLK ddPTM_KYSE-520_SHP099_60min_R1 2 HADNSSDTEMEDMIAEETLEEMDSELLK 28 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7 E7EX82 PHC3 Polyhomeotic-like protein 3 1 HADNS(0.293)S(0.293)DT(0.413)EMEDMIAEETLEEMDSELLK;HADNS(0.228)S(0.228)DT(0.544)EMEDMIAEETLEEMDSELLK 163.94 6.438300000000001e-10 201439000.0 52813.0 55308.0 52251.0 58557.0 50597.0 45326.0 47958.0 47551.0 65037.0 49542.0 True False 49883.35760989465 52650.920660999465 55619.18306455593 64122.23967419599 54578.69604245033 45043.103621174014 52806.06266497556 47386.056679486814 53227.92024935112 49103.096423092735 1.015890264436256 1.0722525562815266 1.1327021535529629 1.305869575345963 1.111512308148096 0.9173169698518372 1.0754120719796676 0.9650319456677193 1.0840033343461108 1.0 15.583526382773483 -6.024121192740289 24.281300552190142 1.0108092098212285 1.1376549961162372 0.3447487741184806 0.08240686249411047 626.4546422506259 630611.8241037022 0.028293439023090686 0.028456735969389833 9.459731444829684e-07 6.024121192740289 0.12684578629500876 HAELS(ph)GSPLK ddPTM_KYSE-520_SHP099_60min_R1 1 HAELSGSPLK 10 0 F6RRE2;E7EV10;Q9BTC8 F6RRE2 MTA3 Metastasis-associated protein MTA3 1 HAELS(0.563)GS(0.437)PLK 84.71799999999999 0.0047574 336000000.0 370500.0 347350.0 351180.0 240740.0 344120.0 329620.0 300250.0 263870.0 320700.0 335360.0 True False 349947.6264265613 330662.78461702034 373817.62470786675 263619.85721887974 371200.28622503363 327562.7193136691 330602.20015761536 262954.69655772083 262468.9641891061 332388.97130613175 1.0528256249039563 0.9948067269430502 1.1246390734293619 0.7931065106732578 1.1167647493428912 0.9854801079184493 0.9946244571789034 0.7911053592555524 0.7896440220556264 1.0 18.342512988597075 -7.206700874451979 7.266562878333934 0.8430378728900676 1.0082045187790536 0.3031946423097406 0.10229419493085307 0.2784789708408733 32.40268833487588 0.046453794973821 0.026537217588886747 6.212968125469016e-08 7.206700874451979 0.165166645888986 HAELSGS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 2 HAELSGSPLK 10 0 F6RRE2;E7EV10;Q9BTC8 F6RRE2 MTA3 Metastasis-associated protein MTA3 1 HAELS(0.001)GS(0.999)PLK;HAELS(0.053)GS(0.947)PLK 150.51 0.00015343 353810000.0 980420.0 856200.0 823200.0 885130.0 804250.0 807570.0 719070.0 724750.0 923800.0 737880.0 True False 926034.1481811843 815066.8668175989 876264.7891665705 969252.4890759616 867539.8994434583 802529.6560771189 791760.613046916 722236.011407921 756061.2071028887 731342.9572619535 1.2662105226911975 1.114479682513244 1.1981585116334261 1.325305015180167 1.1862285550563134 1.0973369581375043 1.0826119335464142 0.9875476399087404 1.0337984383325123 1.0 19.48018857926127 -6.552795527506804 1.6069792015910198 1.013744084567538 1.218800691506031 0.743605917165296 0.054181849078633854 0.2080788746725942 1.0897121742295373 0.0284962059769592 0.020635442476472473 2.800299433175046e-07 6.552795527506804 0.20505660693849292 HAEMVHTGLK ddPTM_KYSE-520_SHP099_60min_R1 7 HAEMVHTGLK 10 0 Q01518-2;Q01518;Q5T0R4;Q5T0R3;Q5T0R2;Q5T0R1;Q5T0R9;Q5T0R7;Q5T0R6;Q5T0R5 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1;Adenylyl cyclase-associated protein 0 ;;;;;; 204.5 6.726100000000001e-07 3219620000.0 5619960.0 4794670.0 3380500.0 3307020.0 5005620.0 4796750.0 3578900.0 4508150.0 4101640.0 3765700.0 False True 5308209.615687491 4564326.856253605 3598412.4389912416 3621318.186508184 5399533.815918147 4766811.703985934 3940690.13869805 4492512.279860118 3356885.5699301735 3732338.8276702715 1.4222207202449728 1.2229133170909516 0.964117301546648 0.9702544044664383 1.4466890776067454 1.2771647816769576 1.0558232573857265 1.2036721442743041 0.8994053661589839 1.0 21.831648531615343 -7.756415046605742 24.992342557545857 0.9497026401832969 1.1875175925352692 0.2765311840770557 0.15853072697192208 162.3584923086582 807645.0608208012 0.1215128337665124 0.04274515652976095 1.7522051537764657e-08 7.756415046605742 0.23781495235197236 HALIIYDDLSK ddPTM_KYSE-520_SHP099_60min_R1 1 HALIIYDDLSK 11 0 P25705-2;P25705-3;P25705 P25705-2 ATP5A1 ATP synthase subunit alpha, mitochondrial 0 113.69 0.00047387 634170000.0 1223100.0 936330.0 575550.0 688460.0 1124300.0 971920.0 788970.0 735270.0 763070.0 692690.0 False True 1155252.2048105982 891347.3013400174 612650.87391256 753891.031406953 1212776.0136080596 965853.8867645806 868726.7872051749 732719.519983308 624515.7234293146 686553.3055046658 1.6826839162348874 1.2982929281577245 0.8923573289946042 1.098080841447248 1.7664702855324284 1.4068155801166944 1.2653449925007623 1.0672434523415582 0.9096390890875556 1.0 19.389012213165596 -7.307225783800115 2.6150326907675385 0.9611941015467172 1.33968298319397 0.3223104296375552 0.23895631203802206 0.4087701497883978 5.401811576971086 0.17428977869699067 0.07340908092294414 4.92917476231739e-08 7.307225783800115 0.3784888816472528 HAPEHHPGHGDRLS(ph)PGER ddPTM_KYSE-520_SHP099_60min_R1 5 HAPEHHPGHGDRLSPGER 18 1 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 HAPEHHPGHGDRLS(1)PGER;HAPEHHPGHGDRLS(1)PGER;HAPEHHPGHGDRLS(1)PGER;HAPEHHPGHGDRLS(1)PGER;HAPEHHPGHGDRLS(1)PGER 149.0 1.7253999999999998e-06 2175053000.0 347812.2 284808.6 401799.6 525434.6 349544.2 331382.2 396879.1 371024.9 432096.5 166178.32 True False 328518.36391956866 271125.96734957583 427700.2451180906 575371.7464063271 377051.3399055574 329313.920769814 436999.51259475143 369737.9012197622 353638.66786634916 164706.10936957656 1.994573031789739 1.6461196757505125 2.596747909079641 3.4933236454227488 2.289237122707507 1.999403191723031 2.653207669511445 2.244834163316457 2.147088952680167 1.0 17.329534543731334 -8.450648185288507 1.3716683163786278 0.9999933760859735 2.3880642121831035 0.42917799077367846 0.4704378443486278 2.08053928469652 5.178447127519112 0.4910396488032907 0.1448627177832961 3.5428422460538208e-09 8.450648185288507 1.3880708360971301 HAPEHHPGHGDRLS(ph)PGERR ddPTM_KYSE-520_SHP099_60min_R1 1 HAPEHHPGHGDRLSPGERR 19 2 Q9H9J4-2;Q9H9J4;C9JPC9 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 HAPEHHPGHGDRLS(1)PGERR 106.35 0.00042904 116080000.0 25914.0 30207.0 39298.0 37623.0 22349.0 19375.0 23775.0 22694.0 48418.0 8460.7 True False 24476.498761721712 28755.810378368613 41831.21195902317 41198.67860823261 24107.73915158455 19254.073438208678 26178.409021639654 22615.279810819426 39626.511718453825 8385.74478032499 2.918822287454964 3.429130164542663 4.988371701601201 4.912942104426405 2.874847706806819 2.2960481081398334 3.1217750727473375 2.6968719419985696 4.7254612150166215 1.0 13.03372320717139 -5.793629804662264 22.861951839513733 2.862982976912302 4.083235037450445 0.26674045778962996 1.0318454385515607 111.69135189623145 79323.12332446239 0.32198412516041985 0.3651485560384035 1.6083116037711195e-06 5.793629804662264 1.2202520605381428 HAPHCLS(ph)EEEGEQDRPR ddPTM_KYSE-520_SHP099_60min_R1 6 HAPHCLSEEEGEQDRPR 17 1 E9PH18;A0A0J9YX62;O75190-3;O75190;O75190-4 E9PH18 DNAJB6 DnaJ homolog subfamily B member 6 1 HAPHCLS(1)EEEGEQDRPR;HAPHCLS(1)EEEGEQDRPR;HAPHCLS(1)EEEGEQDRPR;HAPHCLS(1)EEEGEQDRPR;HAPHCLS(1)EEEGEQDRPR;HAPHCLS(1)EEEGEQDRPR 231.77 9.771300000000001e-20 12318030000.0 2103784.0 1941630.0 1883509.0 1844697.0 1867461.0 1810549.0 1844639.0 2157448.0 2481555.0 1950989.0 True False 1987082.9077305708 1848351.1803539537 2004923.003860954 2020016.4482516234 2014419.5563003784 1799248.6921019494 2031113.11206176 2149964.316440146 2030967.1669108106 1933704.7553064732 1.027604086031033 0.955860079095171 1.0368299495354933 1.0446354039872394 1.041741015929349 0.9304671187079882 1.0503739552214362 1.111836908163055 1.0502984808500004 1.0 20.882936105312066 -6.981006464025039 24.99947502723181 1.0648617351141956 1.0071383483875 0.20606814673298512 0.04363204060978707 312.65656157993493 411520.537920767 0.018156193718737914 0.0122383142061382 1.0447046697545262e-07 6.981006464025039 -0.057723386726695525 HAPS(ph)LHGS(ph)TELLPLSR ddPTM_KYSE-520_SHP099_60min_R1 2 HAPSLHGSTELLPLSR 16 0 Q9H5N1-2;Q9H5N1;H3BU67;H3BNR2;H3BT64;B4DHR0 Q9H5N1-2 RABEP2 Rab GTPase-binding effector protein 2 2 HAPS(1)LHGS(0.912)T(0.088)ELLPLSR;HAPS(1)LHGS(0.832)T(0.168)ELLPLSR 149.84 5.322e-06 946370000.0 517850.0 446590.0 394590.0 491230.0 424300.0 475530.0 418840.0 391250.0 504880.0 456370.0 True False 489123.8281916185 425135.1460547441 420025.9027663231 537916.3515063153 457689.9960632391 472562.0408811026 461180.43468448165 389892.84506843676 413206.5189890735 452326.916850487 1.081350257900514 0.9398846944924771 0.9285892285405586 1.1892202994501855 1.0118566439735552 1.0447356177065716 1.0195732721272501 0.8619713542214705 0.9135130004338335 1.0 18.787006324156454 -7.17364994045245 7.029104539403526 0.9162003929417568 1.0297730467312178 0.2894521293508875 0.07548138440173302 0.3156521384118571 21.655396744195798 0.0365025041736314 0.020941099964140234 6.704247821487806e-08 7.17364994045245 0.11357265378946102 HAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAK ddPTM_KYSE-520_SHP099_60min_R1 11 HAPSPEPAVQGTGVAGVPEESGDAAAIPAK 30 0 P13051 P13051 UNG Uracil-DNA glycosylase 1 HAPS(0.99)PEPAVQGT(0.01)GVAGVPEESGDAAAIPAK;HAPS(0.979)PEPAVQGT(0.021)GVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAK 264.99 2.2336999999999997e-41 46985310000.0 10739570.0 13416440.0 8951310.0 7843720.0 8737560.0 12075870.0 8976350.0 11425660.0 13029680.0 12033640.0 True False 10143824.64329798 12771894.083913002 9528325.765202401 8589184.790499581 9425156.262084175 12000500.016013462 9883767.058733763 11386027.052229099 10663818.563503308 11927031.311630255 0.8504903171845085 1.0708359649780501 0.7988849459891303 0.7201443985582664 0.7902348887852371 1.0061598483699432 0.8286862673946308 0.9546404930727722 0.8940882508713492 1.0 23.507731659050027 -6.252189080387562 24.945179208678532 0.92712821032836 0.8489798292882802 0.17423559117820508 0.09740489991378146 1500.6096079354897 4046680.0491139614 0.03470441406252052 0.03424250111246891 5.595139508106407e-07 6.252189080387562 -0.07814838104007982 HAPS(ph)PEPAVQGTGVAGVPEESGDAAAIPAKK ddPTM_KYSE-520_SHP099_60min_R1 9 HAPSPEPAVQGTGVAGVPEESGDAAAIPAKK 31 1 P13051 P13051 UNG Uracil-DNA glycosylase 1 HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(0.991)PEPAVQGT(0.008)GVAGVPEES(0.001)GDAAAIPAKK;HAPS(0.999)PEPAVQGT(0.001)GVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(0.977)PEPAVQGT(0.023)GVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(1)PEPAVQGTGVAGVPEESGDAAAIPAKK;HAPS(0.998)PEPAVQGT(0.002)GVAGVPEESGDAAAIPAKK 260.83 2.0701e-41 14990320000.0 5282320.0 5574500.0 4501150.0 3538070.0 3758490.0 5451440.0 3906920.0 4914740.0 6228900.0 5289510.0 True False 4989299.179556147 5306692.652504909 4791301.3310946375 3874327.1090404643 4054261.78011718 5417415.540851002 4301869.601464744 4897691.91404894 5097888.777790844 5242649.05657651 0.9516752171876631 1.0122158846104836 0.9139084610449577 0.7390018037122686 0.773323130418469 1.033335529879739 0.8205526547821032 0.9342017482374017 0.9723879517351872 1.0 22.32186454426821 -9.52182644723128 9.05079728296376 1.000000918578496 0.9023043046326381 0.08276897115115078 0.09366868618588349 0.0 0.0 0.09588407211397976 0.02325530336119291 3.0072778309560985e-10 9.52182644723128 -0.09769661394585782 HAPSLHGS(ph)TELLPLSR ddPTM_KYSE-520_SHP099_60min_R1 1 HAPSLHGSTELLPLSR 16 0 Q9H5N1-2;Q9H5N1;H3BU67;H3BNR2;H3BT64;B4DHR0 Q9H5N1-2 RABEP2 Rab GTPase-binding effector protein 2 1 HAPSLHGS(0.929)T(0.071)ELLPLSR 108.45 0.00022397 372700000.0 241580.0 242940.0 236120.0 182110.0 207300.0 197440.0 138010.0 178310.0 239070.0 188290.0 True False 228179.07582220918 231268.79773962573 251340.67300535773 199417.67964663217 223613.33062434458 196207.70372335077 151961.39764780193 177691.484227867 195660.91446426464 186621.89708740317 1.22268115040832 1.2392372028632443 1.3467909014323434 1.068565279631876 1.198215933469033 1.0513648547440184 0.814274209079719 0.9521470256228632 1.0484349238644173 1.0 17.5097587476897 -6.189411698528601 1.5591596943311332 0.9488024009199276 1.2385763451006593 0.6725379189428671 0.08567650266161779 0.2304035482148612 1.1187701586432899 0.03773005674800611 0.03619515479405935 6.465294340692042e-07 6.189411698528601 0.28977394418073166 HAPTYTIPLS(ph)PVLS(ph)PTLPAEAPTAQVPPSLPR ddPTM_KYSE-520_SHP099_60min_R1 8 HAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPR 32 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 2 HAPT(0.001)Y(0.001)T(0.002)IPLS(0.994)PVLS(0.894)PT(0.107)LPAEAPT(0.001)AQVPPSLPR;HAPT(0.016)Y(0.004)T(0.018)IPLS(0.964)PVLS(0.98)PT(0.017)LPAEAPT(0.001)AQVPPSLPR;HAPT(0.13)Y(0.024)T(0.141)IPLS(0.718)PVLS(0.929)PT(0.058)LPAEAPTAQVPPSLPR;HAPT(0.007)Y(0.001)T(0.022)IPLS(0.97)PVLS(0.959)PT(0.041)LPAEAPTAQVPPSLPR;HAPTYTIPLS(0.998)PVLS(0.98)PT(0.022)LPAEAPTAQVPPSLPR;HAPT(0.085)Y(0.141)T(0.093)IPLS(0.671)PVLS(0.528)PT(0.481)LPAEAPTAQVPPSLPR;HAPTYTIPLS(0.996)PVLS(0.966)PT(0.037)LPAEAPTAQVPPSLPR;HAPT(0.102)Y(0.095)T(0.096)IPLS(0.697)PVLS(0.505)PT(0.505)LPAEAPTAQVPPSLPR 181.32 3.3239000000000004e-11 4199363000.0 889954.0 989358.0 975104.0 1179469.0 979598.0 1032331.0 1000469.0 891347.0 1246960.0 1062009.0 True False 840586.4775406846 941827.7566233658 1037960.7640615627 1291565.3791397137 1056686.7894498152 1025887.839305259 1101606.1701564994 888255.1252989543 1020543.4973035476 1052600.4264904985 0.798580787529514 0.8947628491502111 0.9860919090848688 1.2270234237373001 1.003882159703223 0.9746222911249405 1.0465568343244855 0.8438673431479674 0.9695450159621988 1.0 20.005526453815857 -4.583754101143877 2.817301457220447 1.0091443178404833 0.8083779518752843 0.3632299264698824 0.089217892051438 0.32221881201834623 4.822699525341512 0.025534878588097016 0.10565008521987841 2.607629579889769e-05 4.583754101143877 -0.20076636596519903 HAPTYTIPLS(ph)PVLSPTLPAEAPTAQVPPSLPR ddPTM_KYSE-520_SHP099_60min_R1 3 HAPTYTIPLSPVLSPTLPAEAPTAQVPPSLPR 32 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 HAPT(0.006)YT(0.006)IPLS(0.979)PVLS(0.008)PTLPAEAPTAQVPPSLPR;HAPT(0.002)YT(0.008)IPLS(0.988)PVLS(0.002)PTLPAEAPTAQVPPSLPR;HAPT(0.025)YT(0.022)IPLS(0.949)PVLS(0.003)PTLPAEAPTAQVPPSLPR 155.01 2.5866e-07 650929000.0 360273.0 546642.0 379851.0 370897.0 302682.0 420526.0 373297.0 408388.0 453161.0 394382.0 True False 340287.93850358034 520380.49779362994 404336.8032430884 406146.93936575117 326501.3513750019 417901.3412478007 411033.5037876343 406971.39734647615 370878.38565918186 390888.08230455325 0.8705508146918924 1.3312774713560724 1.0344055537821613 1.0390363834354748 0.8352809055984838 1.0691073997037355 1.0515375689233348 1.0411455753449959 0.9488096528105935 1.0 18.57639607374239 -4.983379449933001 24.985146701280794 1.0009717246088874 1.1213959632578194 0.09672608633924507 0.12141294859100495 441.8429132900298 664200.1638458469 0.03010842458576683 0.06265004182067563 1.039011968002947e-05 4.983379449933001 0.12042423864893204 HAQDSDPRS(ph)PTLGIAR ddPTM_KYSE-520_SHP099_60min_R1 2 HAQDSDPRSPTLGIAR 16 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 HAQDS(0.001)DPRS(0.95)PT(0.049)LGIAR;HAQDS(0.012)DPRS(0.967)PT(0.021)LGIAR 77.899 0.007335600000000001 2225500000.0 1420260.0 1532110.0 1611700.0 1782040.0 1597800.0 1401200.0 1414300.0 1309490.0 2075560.0 1432830.0 True False 1341475.3465818819 1458505.1358560051 1715592.7608111775 1951404.5458101393 1723537.76976159 1392454.5910512512 1557271.2462378512 1304947.6848272649 1698690.624609733 1420136.2409248708 0.9446103183087837 1.0270177563429734 1.2080480107273999 1.3740967166215527 1.2136425506887476 0.9805077505411791 1.09656468257135 0.9188890806542696 1.196146239816718 1.0 20.43759791079931 -6.260162476375504 24.986276819127642 1.0369860638475215 1.1617449192668303 0.1676184814529268 0.12752086778944388 220.2376758831925 4309610.894953816 0.04677168636142253 0.04432791960328532 5.493353204525778e-07 6.260162476375504 0.12475885541930887 HAS(ph)APSHVQPSDSEK ddPTM_KYSE-520_SHP099_60min_R1 6 HASAPSHVQPSDSEK 15 0 O60343-2;A0A3B3IRT3;O60343-3;O60343 O60343-2 TBC1D4 TBC1 domain family member 4 1 HAS(0.999)APS(0.001)HVQPSDSEK;HAS(0.999)APS(0.001)HVQPSDSEK;HAS(0.999)APS(0.001)HVQPSDSEK;HAS(1)APSHVQPSDSEK;HAS(0.984)APS(0.016)HVQPSDSEK;HAS(0.987)APS(0.013)HVQPSDSEK 199.41 1.4689e-11 15251280000.0 7573260.0 9605990.0 8250130.0 18252180.0 8783370.0 8410160.0 8813040.0 8012520.0 10139670.0 7311020.0 True False 7153156.170880472 9144503.821515048 8781946.58047472 19986861.699481968 9474571.248460928 8357669.071849556 9703948.090181753 7984726.438256227 8298561.528279866 7246250.050687483 0.9871528198508444 1.2619636029048529 1.2119298284002136 2.758235164350384 1.3075137046315473 1.1533785079713925 1.3391682625223646 1.1019115242233026 1.1452215242686177 1.0 22.788803159915606 -5.98801929323521 24.999881682962965 1.1733892942666395 1.574842705669023 0.15127241482329112 0.4515800751517986 473.92113172940896 988914.8802842286 0.14771914904080458 0.1673819829044491 1.0279706302201986e-06 5.98801929323521 0.40145341140238355 HAS(ph)PDKWNDKPK ddPTM_KYSE-520_SHP099_60min_R1 1 HASPDKWNDKPK 12 2 Q96JM3;A0A2R8Y4S6;S4R3K0;A0A2R8Y735 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 HAS(1)PDKWNDKPK 136.81 2.5966999999999997e-05 2153500000.0 2747100.0 2280600.0 2390000.0 2202000.0 2229000.0 2483300.0 2228900.0 2436100.0 3022900.0 1591700.0 True False 2594712.8867919184 2171036.5527496077 2544063.224135207 2411277.41794456 2404409.6187248603 2467800.8035666393 2454218.9639677247 2427649.737690016 2474017.5611077296 1577598.7763238617 1.644722933189735 1.3761652109090636 1.6126173918969509 1.5284478247145612 1.5240945003314736 1.5642765705721047 1.555667385649584 1.538825824489388 1.5682172160862808 1.0 20.58929890711601 -10.05757208191856 4.528789203618837 0.9999755014154296 1.5423293906046818 0.8565353562135676 0.06700941705288123 20733548.95652719 0.40154594466817006 6325.1968801876465 0.014900681729399916 8.758463371908492e-11 10.05757208191856 0.5423538891892522 HAS(ph)PILPITEFSDIPR ddPTM_KYSE-520_SHP099_60min_R1 13 HASPILPITEFSDIPR 16 0 G5E972;P42167;H0YJH7 G5E972 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 HAS(1)PILPITEFSDIPR;HAS(0.999)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR;HAS(1)PILPITEFSDIPR 228.3 1.113e-18 5743532000.0 1511453.0 1825820.0 1398422.0 1688855.0 1407352.0 1490905.0 1540390.0 1859927.0 2387106.0 1389234.0 True False 1427609.6890831443 1738104.8665883068 1488566.5196743112 1849363.2714272293 1518102.5956624812 1481599.7088718717 1696107.653957664 1853475.347347226 1953667.7244452764 1376926.4675676965 1.0368089529174194 1.2623076885569804 1.0810791677959564 1.343109683042174 1.1025298964179027 1.076019485259135 1.2318069947146797 1.3460960995406968 1.418861333892708 1.0 20.393020086162323 -6.994810780021353 23.39330181726294 1.28727755799538 1.1584340341355066 0.10211476651341889 0.13375014163031876 111.19956650737971 501288.831002225 0.05364743127635042 0.03599835461637739 1.012020290501657e-07 6.994810780021353 -0.1288435238598733 HAS(ph)S(ph)S(ph)PES(ph)PKPAPAPGSHR ddPTM_KYSE-520_SHP099_60min_R1 3 HASSSPESPKPAPAPGSHR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 4 HAS(1)S(1)S(1)PES(1)PKPAPAPGSHR;HAS(1)S(1)S(1)PES(1)PKPAPAPGSHR;HAS(1)S(1)S(1)PES(1)PKPAPAPGSHR 61.985 0.034335000000000004 981770000.0 1288180.0 1232510.0 1170380.0 1225670.0 1164550.0 1278090.0 1185860.0 1267340.0 1399930.0 1111730.0 True False 1216722.0874768335 1173298.3695647735 1245824.5674742116 1342157.3082888767 1256193.4596168846 1270112.9662265852 1305738.301678299 1262943.893339379 1145738.0013634416 1101880.9371128513 1.104222830703369 1.0648141101696977 1.1306344683106337 1.2180601942398581 1.1400446430340858 1.1526771391059143 1.1850085228805163 1.1461709253710703 1.0398019992663676 1.0 20.071536912364984 -7.856371105666856 3.6958087765370564 1.002397306996561 1.1441474811306653 0.6161756816971069 0.0392812695745571 0.15622613245514805 3.7933160106570565 0.04150049118023982 0.011117147648180602 1.3919668556252616e-08 7.856371105666856 0.1417501741341043 HAS(ph)S(ph)SPESPKPAPAPGSHR ddPTM_KYSE-520_SHP099_60min_R1 1 HASSSPESPKPAPAPGSHR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 HAS(0.946)S(0.466)S(0.381)PES(0.206)PKPAPAPGS(0.001)HR 56.766000000000005 0.056379 0.0 108410.0 112490.0 104190.0 155160.0 109200.0 108280.0 106630.0 104720.0 116060.0 106130.0 True False 102396.28119002281 107085.81154906772 110906.25410989407 169906.35974944496 117793.41873699192 107604.18435557334 117409.20100851469 104356.75076183172 94986.42963451089 105189.77076789067 0.9734433342950056 1.018024954017257 1.0543444795085375 1.6152365245129816 1.1198181902773814 1.0229529313549912 1.1161655753351447 0.9920807888449812 0.9030006334371216 1.0 16.68263489028403 -7.050431463517391 1.371500359179595 0.951506407865397 1.154771726300964 0.16776027210510824 0.1716223532890993 0.8673299245561561 3.0721796044259575 0.13756879730362973 0.06196671166336979 8.903659365366794e-08 7.050431463517391 0.20326531843556706 HAS(ph)SANQYK ddPTM_KYSE-520_SHP099_60min_R1 6 HASSANQYK 9 0 Q8TED9;Q8TED9-2;Q8TED9-4 Q8TED9 AFAP1L1 Actin filament-associated protein 1-like 1 1 HAS(0.984)S(0.016)ANQYK;HAS(0.5)S(0.5)ANQYK;HAS(0.924)S(0.076)ANQYK;HAS(0.913)S(0.087)ANQYK;HAS(0.842)S(0.158)ANQYK;HAS(0.921)S(0.079)ANQYK 169.81 8.693299999999999e-05 4215840000.0 3731240.0 4584340.0 3971100.0 6841670.0 4320020.0 3922210.0 4361160.0 4095810.0 4872940.0 4638920.0 True False 3524260.6791574624 4364101.425165377 4227083.459984647 7491900.259776899 4659980.996448532 3897730.03252007 4802028.613619935 4081602.591079245 3988136.932820897 4597822.777825151 0.7665064204202534 0.9491669505429854 0.9193663314670276 1.6294452008697684 1.0135190549151143 0.8477338559716657 1.0444135943602804 0.8877250795233811 0.8673968366191257 1.0 22.13251942805529 -6.003617095626047 24.996106070761403 0.929733290120527 1.0815594437860785 0.07972854631217574 0.21765454311594667 412.6505427029231 2851675.321302014 0.0722664027026436 0.08024600234520429 9.917059168187698e-07 6.003617095626047 0.15182615366555152 HAS(ph)SSPES(ph)PKPAPAPGSHR ddPTM_KYSE-520_SHP099_60min_R1 1 HASSSPESPKPAPAPGSHR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 HAS(0.656)S(0.222)S(0.125)PES(0.997)PKPAPAPGSHR 105.52 0.00036794 1126000000.0 284820.0 303350.0 229630.0 526310.0 285680.0 268870.0 310090.0 272570.0 396170.0 244700.0 True False 269020.4668254065 288776.610662367 244432.31722099034 576330.3441591291 308161.3907031488 267191.8825977378 341436.92338676064 271624.51828831644 324235.51463298424 242532.14837371948 1.1092157003898344 1.1906735358538494 1.0078347091715976 2.376304947709685 1.2706001772115618 1.1016761463969713 1.4078006799355858 1.1199526335361047 1.3368764380603575 1.0 17.88781646802638 -5.9827786812785 24.99996509994928 1.2110522833929618 1.4310934924638392 0.07755811642134824 0.36787589791632314 739.1488933567905 1073007.5197217765 0.11854087559926917 0.13438390483820054 1.0404502495968824e-06 5.9827786812785 0.22004120907087743 HATAEEVEEEERDR ddPTM_KYSE-520_SHP099_60min_R1 2 HATAEEVEEEERDR 14 1 Q8TDN6 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog 0 ; 258.6 1.3186999999999998e-24 59295000.0 12681.8 17456.7 17884.4 21859.0 12417.8 14254.3 11458.2 13077.4 13126.7 11837.1 False True 11978.315273458464 16618.0539289591 19037.257040051747 23936.47278785201 13395.010212382944 14165.333626335881 12616.506677255575 13032.037551688098 10743.222177178484 11732.232503124445 1.0209749312646577 1.4164443062761922 1.6226457355820283 2.040231710501596 1.1417273062748867 1.207386030115195 1.0753713476012035 1.110789233695931 0.9157014382656861 1.0 13.518189946600879 -5.967549176610936 24.980580902269235 1.0812784739568035 1.532621481852669 0.452413542115342 0.24328639074944253 188.60202909399922 145184.6805088874 0.07970071709493685 0.09037156214031773 1.077583228447118e-06 5.967549176610936 0.45134300789586557 HAVS(ph)DPSILDSLDLNEDER ddPTM_KYSE-520_SHP099_60min_R1 3 HAVSDPSILDSLDLNEDER 19 0 H0YJS4;G3V4T5;P05198 H0YJS4 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 1 HAVS(0.967)DPS(0.033)ILDSLDLNEDER;HAVS(0.979)DPS(0.021)ILDSLDLNEDER;HAVS(0.957)DPS(0.043)ILDSLDLNEDER 213.23 9.88e-19 241040000.0 130419.0 140561.0 121217.0 143384.0 115964.0 134214.0 116698.0 128286.0 149081.0 118321.0 True False 123184.3980861691 133808.23857363765 129030.8417740574 157011.17225002847 125089.70705509628 133376.32064184453 128494.9727027258 127841.00580817746 122011.6484261808 117272.76799234498 1.0504092313588949 1.1410000877814364 1.1002626098369226 1.3388544922916583 1.0666560463829213 1.137317067936443 1.095693185233876 1.0901167252786454 1.0404090439320504 1.0 16.839508517270122 -7.566290661004391 0.8937428538136246 1.0018467131636384 1.1456751693789176 0.28438581031337506 0.07422841583981907 0.7277557643948748 1.13840489451616 0.06980482359450933 0.026640072230353525 2.714621841167308e-08 7.566290661004391 0.14382845621527918 HAVSDPSILDSLDLNEDEREVLINNINR ddPTM_KYSE-520_SHP099_60min_R1 1 HAVSDPSILDSLDLNEDEREVLINNINR 28 1 H0YJS4;G3V4T5;P05198 H0YJS4 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 0 252.84 1.4845e-31 230930000.0 62213.0 52253.0 50080.0 65963.0 60800.0 34657.0 49953.0 35211.0 78174.0 53074.0 False True 58761.92087145923 49742.68744664801 53308.23693083308 72232.1036875009 65584.61409532142 34440.69280763859 55002.73673429929 35088.86125930916 63979.5722061714 52603.80565094716 1.1170659640364098 0.9456100529439996 1.0133912607874833 1.373134563054191 1.2467655768198311 0.6547186535546495 1.04560375534938 0.6670403562080944 1.2162536800228523 1.0 15.682879555400511 -6.237672425224321 24.99726431777818 0.903968288651121 1.1344465601851594 0.2516137269637124 0.1911199559365036 1125.105708224153 1183348.310827208 0.06275081952764827 0.06271734449488164 5.785322517019371e-07 6.237672425224321 0.23047827153403844 HAVSEGTK ddPTM_KYSE-520_SHP099_60min_R1 1 HAVSEGTK 8 0 P62807;O60814;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;P57053;Q5QNW6-2;A0A2R8Y619;Q16778;P06899;P33778;P23527;Q99880;Q96A08 P62807;Q16778;Q99880 HIST1H2BC;HIST1H2BK;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;H2BFS;HIST2H2BE;HIST1H2BJ;HIST1H2BB;HIST1H2BO;HIST1H2BL;HIST1H2BA Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-J;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-L;Histone H2B type 1-A 0 126.52 0.0014561 260360000.0 281870.0 693800.0 243770.0 260170.0 434120.0 378550.0 476430.0 337340.0 284500.0 1838300.0 False True 266234.10920608597 660468.8065849679 259483.8042457905 284896.478577037 468282.7741950819 376187.3290340073 524592.1939087178 336169.8462757483 232841.97166136818 1822014.0921757587 0.14612077390036124 0.3624937970684238 0.14241591509093535 0.15636348796667526 0.25701380478121433 0.2064678482177836 0.28791884550260305 0.18450452590863936 0.12779372709643527 1.0 20.797102686879867 -10.470454703779493 3.3436893767052838 1.0133465651072706 0.21207224683452242 0.917742601445858 0.07113256529431676 158966103.97136927 210798172.32996273 19786698.164020248 0.0171142676656091 3.3848957394699456e-11 10.470454703779493 -0.8012743182727482 HAYGDQYR ddPTM_KYSE-520_SHP099_60min_R1 5 HAYGDQYR 8 0 C9J4N6;O75874 C9J4N6 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic 0 ;;;; 133.23 0.0012954000000000002 2462160000.0 1262100.0 1089930.0 731970.0 674259.0 1075990.0 1061960.0 816540.0 932130.0 918070.0 840766.0 False True 1192088.7970660264 1037568.1267817154 779153.9573934084 738340.3726366389 1160664.2914543573 1055331.9137259403 899083.8318624444 928896.6585907782 751371.6306613422 833317.4673460495 1.4305337926763881 1.2451054579308936 0.9350025505583831 0.8860253163636498 1.3928236679723545 1.2664224081213162 1.0789211400138385 1.1146972132351065 0.9016631237243969 1.0 19.668506695491487 -4.505735801933983 4.709203728889359 1.0873962628434743 1.3992371559236136 0.3512590654711264 0.15291733282850767 0.22693371515805508 13.066986886092522 0.04177866684387461 0.15303328775384756 3.120787502023564e-05 4.505735801933983 0.3118408930801393 HAYKDDS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 HAYKDDSPR 9 1 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 HAYKDDS(1)PR;HAYKDDS(1)PR;HAYKDDS(1)PR;HAY(0.001)KDDS(0.999)PR 132.56 0.0003497 13252920000.0 17258000.0 15763500.0 14191300.0 14471400.0 15200600.0 14435600.0 14576300.0 15823200.0 17791600.0 13930000.0 True False 16300664.337029912 15006197.798504109 15106093.904882813 15846757.505014943 16396800.74041684 14345502.06578606 16049814.65497899 15768313.01236266 14561093.929737763 13806591.037376005 1.1806436717725735 1.086886528171989 1.094121920754291 1.147767574350249 1.1876067521685 1.0390328812486125 1.1624748362235344 1.142085904455057 1.0546480221163381 1.0 23.718853814322966 -7.953658983147818 3.651300418089227 1.0007109613073506 1.1278090606763826 0.48995262242493687 0.04356305078249872 0.16592778613145265 4.773646929453799 0.041105079074840324 0.010878498272266916 1.1126050244450363e-08 7.953658983147818 0.12709809936903205 HCAPS(ph)PDRS(ph)PELSSSR ddPTM_KYSE-520_SHP099_60min_R1 6 HCAPSPDRSPELSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 2 HCAPS(1)PDRS(0.753)PELS(0.188)S(0.058)S(0.001)R;HCAPS(1)PDRS(0.983)PELS(0.012)S(0.003)S(0.001)R;HCAPS(1)PDRS(0.998)PELS(0.001)SSR;HCAPS(1)PDRS(0.998)PELS(0.002)SSR;HCAPS(1)PDRS(0.996)PELS(0.004)SSR;HCAPS(0.997)PDRS(0.984)PELS(0.008)S(0.006)S(0.005)R 194.1 7.643500000000001e-10 15589450000.0 5996750.0 5871550.0 5364860.0 6113930.0 5786380.0 5533600.0 5003820.0 5898510.0 7051790.0 5378010.0 True False 5664098.323275248 5589471.924623774 5710687.459679502 6694996.068979913 6241735.186001426 5499062.749815296 5509654.958177119 5878049.445532579 5771362.697159646 5330365.015428463 1.0626098413299672 1.0486095996137863 1.0713501689190545 1.2560108078155243 1.1709770659110679 1.0316484394405536 1.033635584473054 1.1027480160399656 1.0827331112324838 1.0 22.345802899291268 -6.274949438989405 24.788030600561854 1.0555424404418026 1.122480170074159 0.24631086268957847 0.06240310338597395 1297.7257915343232 2381040.124551945 0.024540500851180577 0.021770432235142887 5.30946253942321e-07 6.274949438989405 0.06693772963235634 HCAPS(ph)PDRSPELS(ph)SSR ddPTM_KYSE-520_SHP099_60min_R1 1 HCAPSPDRSPELSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 2 HCAPS(0.984)PDRS(0.016)PELS(0.746)S(0.047)S(0.207)R 270.72 4.8668e-29 2432600000.0 1657900.0 1809700.0 1554700.0 1658500.0 1601100.0 1558000.0 1494400.0 1616100.0 1947500.0 1541800.0 True False 1565932.9820582857 1722759.2955849208 1654918.4496079506 1816123.3413537915 1727097.4609871588 1548275.9440892437 1645468.5359385165 1610494.1263005745 1593883.0924798376 1528140.8515022502 1.0247307900439175 1.1273563519300918 1.0829619848072713 1.1884528442312356 1.1301952037270144 1.0131762020282356 1.0767780563689051 1.0538911545472829 1.0430210611233637 1.0 20.543346094634085 -6.254371333373962 24.955402568415106 1.0432042890761206 1.1144368188391913 0.41102000322211185 0.04352147608519634 588.5446423936704 2077996.5794693122 0.01465814482971687 0.01434323210147995 5.567095438575525e-07 6.254371333373962 0.0712325297630707 HCAPS(ph)PDRSPELSSSR ddPTM_KYSE-520_SHP099_60min_R1 3 HCAPSPDRSPELSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 HCAPS(0.985)PDRS(0.015)PELSSSR;HCAPS(0.917)PDRS(0.083)PELSSSR;HCAPS(0.986)PDRS(0.014)PELSSSR 144.72 8.3106e-06 2154710000.0 1255220.0 1322860.0 1144230.0 1117620.0 1129650.0 1236130.0 1137810.0 1114880.0 1477720.0 968320.0 True False 1185590.4443809655 1259307.8199466579 1217988.8966327303 1223838.2687752945 1218547.028170722 1228414.854150859 1252830.9387554904 1111012.7414949478 1209403.2982897607 959741.4381415615 1.235322762218892 1.3121323826396152 1.2690802420610678 1.2751749795706735 1.2696617857100245 1.2799435403451531 1.3053838137712028 1.1576167260697916 1.2601345010502445 1.0 19.872286259276365 -9.036678658307686 0.5277239654345108 0.9748044011349943 1.280482395155072 0.8160414752925332 0.03805522483458155 1.6879772562429793 0.560951904993519 0.12590443761219705 0.017120065198489028 9.190123374520956e-10 9.036678658307686 0.30567799402007756 HCAPSPDRS(ph)PELS(ph)SSR ddPTM_KYSE-520_SHP099_60min_R1 1 HCAPSPDRSPELSSSR 16 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 2 HCAPS(0.067)PDRS(0.934)PELS(0.882)S(0.068)S(0.049)R 170.16 1.1318e-07 148570000.0 198910.0 186570.0 173680.0 181130.0 180670.0 178470.0 169890.0 169360.0 205550.0 166120.0 True False 187876.06578274543 177606.8971527208 184875.6906978253 198344.54074127972 194887.70112831803 177356.10252991508 187064.13916661873 168772.529688921 168227.30149382856 164648.30603940442 1.1410749998106997 1.0787046731608345 1.1228520665956927 1.2046558237520584 1.1836605296241347 1.0771814590516915 1.1361437215263523 1.0250486855815544 1.0217372139472094 1.0 17.32902814348442 -7.297317975394212 1.5978625381281972 1.0022826110787593 1.1390552863604984 0.6665795720389089 0.03837888108212591 0.26610611605551693 1.2195187045360965 0.03337452484683055 0.01259397436312593 5.042919372543149e-08 7.297317975394212 0.1367726752817391 HCCGVAQMR ddPTM_KYSE-520_SHP099_60min_R1 1 HCCGVAQMR 9 0 V9GYQ3;O00170 V9GYQ3 AIP AH receptor-interacting protein 0 103.74 0.0032277 365620000.0 64294.0 62614.0 50067.0 51969.0 56596.0 54058.0 41857.0 37470.0 60343.0 46516.0 False True 60727.483653088544 59605.929454469944 53294.39893003235 56908.1181349504 61049.78321280949 53720.60397020304 46088.31404495352 37340.025315563726 49386.23232324052 46103.90442890039 1.317187435756988 1.2928607716162488 1.1559628103129718 1.2343448746886903 1.3241781573393212 1.1652072559938784 0.9996618424374251 0.8099102620071589 1.071194141472378 1.0 15.492601313754756 -6.699325471104969 2.9856051113756923 0.9477067697194255 1.2578756835157041 0.7675594392431537 0.07643948437130584 0.11675077366361764 2.111686907409705 0.03265743736655313 0.02324097845763596 1.998363684780725e-07 6.699325471104969 0.31016891379627864 HCDLQVR ddPTM_KYSE-520_SHP099_60min_R1 5 HCDLQVR 7 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;;;; 120.65 0.0033756999999999997 1465690000.0 1675530.0 1456720.0 1381130.0 1114870.0 1673530.0 1513950.0 1086640.0 1136660.0 1555120.0 1316260.0 False True 1582585.0108137536 1386736.9846187024 1470159.8496861332 1220826.9096021105 1805227.2899168306 1504500.8764787628 1196488.175784417 1132717.1917584387 1272749.40938498 1304598.9604347835 1.2130816126714725 1.0629603630502242 1.1269055811574258 0.9357871243399165 1.3837411684853733 1.153228633554451 0.9171310203908667 0.86824934413633 0.975586711306907 1.0 20.315174953351878 -6.761199702221489 24.999066914431047 0.9292625146869068 1.1425685502810983 0.44968630867348114 0.11118040520721457 6.016060372324824 627604.0175610541 0.045029373141294265 0.032647273613571295 1.7330069235808248e-07 6.761199702221489 0.21330603559419148 HCKDDVNR ddPTM_KYSE-520_SHP099_60min_R1 5 HCKDDVNR 8 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 0 ;;;; 137.14 0.00068155 2779310000.0 364894.0 627635.0 181068.0 137559.0 876750.0 1154800.0 262473.0 263690.0 246960.0 1203210.0 False True 344652.6024218447 597482.4725006581 192739.93299904335 150632.5660013786 945745.2369748862 1147592.4648486893 289006.33232962474 262775.32093570835 202118.28935497862 1192550.495483214 0.28900461970140195 0.5010123049410683 0.1616199345260817 0.12631126863969247 0.7930441860171934 0.9623009417170985 0.24234305668752515 0.22034733282235855 0.1694840513005544 1.0 20.185618924058847 -5.744827322880213 24.999366645066555 0.5293775738449806 0.27831979899065046 0.18746753073828515 0.2953424935029914 540.4857070092679 813369.5710672173 0.09400291413867985 0.12101480349292765 1.7995862951813314e-06 5.744827322880213 -0.2510577748543302 HCNGVDWR ddPTM_KYSE-520_SHP099_60min_R1 9 HCNGVDWR 8 0 O15371-2;O15371;O15371-3 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 0 ;;;;;;;; 134.26 0.0012686 11222190000.0 9370670.0 9011560.0 6119190.0 5421180.0 8752680.0 8657370.0 6812170.0 7512260.0 6933250.0 7040730.0 False True 8850860.255132476 8578631.130972665 6513642.77845017 5936407.317262804 9441466.12006314 8603336.14254166 7500810.623972367 7486201.723434671 5674346.573009412 6978354.609805052 1.2683305377884393 1.2293200346854138 0.9334066757367229 0.850688686545358 1.3529645092551261 1.2328602691604982 1.074868080425897 1.0727746212432454 0.8131353148830496 1.0 22.7344554802426 -7.603140031065339 5.234788117315418 0.9088353071433082 1.1282256777758342 0.2614970691591576 0.150653026485575 0.3103405056550645 14.548667491823592 0.11569363585311697 0.04149707973672114 2.4937905158339896e-08 7.603140031065339 0.21939037063252598 HDADGQATLLNLLLR ddPTM_KYSE-520_SHP099_60min_R1 2 HDADGQATLLNLLLR 15 0 O43242;O43242-2 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 0 ; 162.37 8.623599999999999e-08 221294000.0 213624.0 228140.0 155099.0 158176.0 241760.0 205439.0 152077.0 162703.0 171244.0 149580.0 False True 201773.85087111362 217179.81195487862 165096.92970717404 173208.99948265133 260785.13657376493 204156.77899727234 167450.42728849192 162138.62126816556 140150.4063099447 148254.8375714792 1.3609933690955 1.4649087713591005 1.1136023108019975 1.168319377093788 1.7590328979857448 1.3770665587815354 1.1294769872703667 1.0936480989363497 0.9453344565729461 1.0 17.177719655272284 -6.912014487773496 3.0106327005937445 1.022993928573423 1.3744494147663406 0.49493191410164383 0.16705804474069905 0.24994725257738368 4.546219039017626 0.08584505910626612 0.053230670767194364 1.2245753475689588e-07 6.912014487773496 0.35145548619291755 HDDGTQS(ph)DSENAGAHR ddPTM_KYSE-520_SHP099_60min_R1 6 HDDGTQSDSENAGAHR 16 0 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 HDDGT(0.004)QS(0.996)DSENAGAHR;HDDGT(0.006)QS(0.987)DS(0.007)ENAGAHR;HDDGT(0.003)QS(0.997)DSENAGAHR;HDDGTQS(1)DSENAGAHR;HDDGT(0.027)QS(0.972)DS(0.001)ENAGAHR;HDDGT(0.035)QS(0.965)DS(0.001)ENAGAHR 232.54 4.219e-23 685161000.0 478440.0 432597.0 391631.0 568251.0 460690.0 478039.0 492829.0 512091.0 526730.0 437847.0 True False 451899.9794535057 411814.39077866497 416876.1608917552 622257.404189107 496943.68203246087 475055.38128143694 542648.9648675354 510314.6758439374 431089.10978274996 433968.01621981134 1.0413209327956823 0.9489510180171314 0.9606149423707786 1.4338784908838171 1.1451159151340577 1.0946783254202177 1.2504353882906327 1.175926927263357 0.993366086141235 1.0 18.72722919327844 HDDYLVMLK ddPTM_KYSE-520_SHP099_60min_R1 1 HDDYLVMLK 9 0 Q9Y224;H0YJB9;G3V4C6 Q9Y224 C14orf166 UPF0568 protein C14orf166 0 90.71 0.006847800000000001 501940000.0 641990.0 643800.0 443650.0 378880.0 647210.0 626040.0 462100.0 527100.0 557290.0 598140.0 False True 606377.5349246641 612870.881636499 472248.38886509853 414888.64128557395 698141.744878832 622132.6521422534 508813.57766139525 525271.6131260649 456100.1841376586 592840.9449458781 1.022833426223659 1.0337863584851572 0.79658531161037 0.699831286658937 1.1776206600280739 1.0494090488285173 0.8582632188265034 0.886024519062222 0.7693466317163655 1.0 19.17728556619397 -6.820082434814362 24.999645176935353 0.8689102858695849 0.956729162215608 0.082005420444209 0.13668815719998778 230.11172806246833 98094.27567451575 0.06138669544320552 0.041386920103629384 1.5132739818349058e-07 6.820082434814362 0.08781887634602314 HDDYYR ddPTM_KYSE-520_SHP099_60min_R1 5 HDDYYR 6 0 F8WJN3;Q16630-3;Q16630;Q16630-2 F8WJN3 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 0 ;;;; 114.54 0.014648 956260000.0 440018.0 395607.0 301079.0 267971.0 404136.0 397947.0 330659.0 361877.0 341580.0 358456.0 False True 415609.32438586326 376601.445901787 320487.0340834325 293438.8832715813 435939.20398070454 395463.2651620553 364085.2386408556 360621.7331497264 279557.68253107223 355280.35871454846 1.1698066447849609 1.0600120064739325 0.9020679759584718 0.8259361264250075 1.2270287205236745 1.1131019642991071 1.0247829065422145 1.0150342519763933 0.7868650086442973 1.0 18.438598407495544 -7.600400359660027 8.685888565790144 0.8940392257658205 1.0405973483902102 0.1987186514214513 0.12055292235049993 0.49644371814425997 49.901807892113965 0.0860474221833639 0.032276953097937544 2.509571885405501e-08 7.600400359660027 0.14655812262438972 HDELTYF ddPTM_KYSE-520_SHP099_60min_R1 1 HDELTYF 7 0 P04080;A0A1W2PQG6 P04080 CSTB Cystatin-B 0 92.69200000000001 0.051912 96004000.0 361420.0 324540.0 220160.0 287970.0 346100.0 331220.0 282560.0 267520.0 283590.0 278680.0 False True 341371.31212709256 308948.6112555285 234351.865868455 315338.5822186628 373336.1009603746 329152.7331201791 311123.9223198524 266592.03555963706 232097.2047221349 276211.11200975906 1.2359072364729167 1.1185234692680024 0.8484519835689119 1.1416578425256159 1.351633170164363 1.1916708590223173 1.1263990071075047 0.9651749113924781 0.8402891651728134 1.0 18.075411835013586 -7.309013150987945 3.639574090107291 0.916509549111306 1.1433401961426048 0.37635446559179786 0.12451997095876952 0.2826771756968821 7.741359545888556 0.0816017173417352 0.03719491198542545 4.908930110643171e-08 7.309013150987945 0.22683064703129885 HDFCYR ddPTM_KYSE-520_SHP099_60min_R1 1 HDFCYR 6 0 Q9H1I8-2;Q9H1I8-3;Q9H1I8 Q9H1I8-2 ASCC2 Activating signal cointegrator 1 complex subunit 2 0 87.58200000000001 0.027544 307300000.0 355660.0 346660.0 231750.0 236730.0 406370.0 377960.0 266410.0 282720.0 285470.0 450780.0 False True 335930.83080936776 330005.93325273145 246688.97581311048 259228.74802453036 438349.00707098347 375601.01144285704 293341.3227110418 281739.3103073438 233635.844113078 446786.439901533 0.7518823330524609 0.7386211929920282 0.5521406958265745 0.5802072866886059 0.9811152889232514 0.8406723613313679 0.6565582491171645 0.6305905576933717 0.5229251007809657 1.0 18.76922587470817 HDGGS(ph)PSIK ddPTM_KYSE-520_SHP099_60min_R1 1 HDGGSPSIK 9 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 HDGGS(0.682)PS(0.318)IK 99.539 0.0025939 319180000.0 419460.0 467140.0 391360.0 497930.0 452920.0 386630.0 355110.0 406970.0 586430.0 357950.0 True False 396191.71762722096 444697.8932085649 416587.6917981399 545253.1174918868 488562.2272377145 384216.89875688317 391007.98433961975 405558.3160575117 479949.09469727887 354778.84148088616 1.1167287089993103 1.2534509988034988 1.1742179721295012 1.5368817238816723 1.3770895276572912 1.082975797409787 1.1021175409094555 1.143129940795416 1.3528120580526117 1.0 18.436560446305712 -6.266087204393176 24.956290149671307 1.1430220929819948 1.2966476383570655 0.2469692931142461 0.1353347776403069 632.2443174379798 3394792.7799916337 0.04924098878415761 0.04486399386495266 5.418920699681419e-07 6.266087204393176 0.15362554537507078 HDGKDEIIK ddPTM_KYSE-520_SHP099_60min_R1 3 HDGKDEIIK 9 1 Q7L576;Q7L576-2;H0YL50;Q7L576-3 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 0 ;; 119.68 0.00076339 2987950000.0 10425900.0 9375800.0 6295400.0 5414500.0 8418200.0 9122500.0 6783800.0 7813700.0 7895700.0 7052200.0 False True 9847554.543483613 8925372.494637296 6701211.556996146 5929092.452071212 9080664.446994008 9065563.093680432 7469572.707507837 7786596.098431281 6462039.91439951 6989722.994528582 1.4088619178745831 1.2769279271330067 0.9587234804929642 0.848258572866534 1.2991451097707554 1.296984601646843 1.068650748156239 1.1140063926033228 0.9245058666069983 1.0 22.73680385148588 -4.574665662141153 5.18791446423696 1.0776849863608782 1.3807520245326423 0.399655260608187 0.14003164613659644 0.1888195464569445 10.808130799397016 0.03885259818725558 0.11260622929083008 2.6627741846728664e-05 4.574665662141153 0.30306703817176417 HDKVEDALNLKEEFDR ddPTM_KYSE-520_SHP099_60min_R1 1 HDKVEDALNLKEEFDR 16 2 P42704 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial 0 205.31 7.2681e-13 936660000.0 1267900.0 1462900.0 914060.0 1171000.0 1359000.0 1298300.0 1236800.0 1523700.0 1511800.0 1024700.0 False True 1197567.059504013 1392620.088142334 972981.7701477096 1282291.487926011 1465945.568347728 1290196.8281200675 1361827.8140047924 1518414.6403342541 1237295.229376648 1015621.9552045356 1.1791464859213638 1.3711992744996093 0.9580156919232425 1.2625677116912768 1.4433968868391607 1.2703514546022543 1.340880636762657 1.4950588972138372 1.2182635704517335 1.0 19.953932057215003 -5.516830164876188 24.92204193590373 1.3234595485218927 1.1764055874850818 0.09582463834299282 0.15757340460604913 480.52106550751887 1979900.7056221147 0.04382685374441856 0.05856174282616717 3.0420744261885286e-06 5.516830164876188 -0.1470539610368109 HDKVEDALNLKEEFDRLDSSAVLDTGK ddPTM_KYSE-520_SHP099_60min_R1 1 HDKVEDALNLKEEFDRLDSSAVLDTGK 27 3 P42704 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial 0 66.138 0.028689 378020000.0 708460.0 816780.0 566630.0 632360.0 636980.0 528810.0 484310.0 591300.0 878080.0 398110.0 False True 669160.3115200031 777540.6627882246 603155.8764400554 692459.304274034 687106.7020795703 525509.500637891 533268.7812101071 589248.9183104577 718642.8065954797 394583.05512489285 1.69586682151924 1.9705373879831678 1.5285904161524255 1.7549139408808565 1.741348730401229 1.3318095995570756 1.351474104840406 1.493345724448176 1.8212713325158272 1.0 18.5899694770969 -6.249993107241143 23.692971524550686 1.4274076362266293 1.7404341340233949 0.38226551116377283 0.21379444617172372 428.6524844061431 887279.7529131847 0.06953473969991433 0.06887804331016681 5.623502502724547e-07 6.249993107241143 0.3130264977967656 HDLDLICR ddPTM_KYSE-520_SHP099_60min_R1 10 HDLDLICR 8 0 P62136-3;P62136;P62136-2;E9PMD7;F8VR82;F8VYE8;F8W0W8;P36873;P36873-2;P62140 P62136-3;P62140 PPP1CA;PPP1CC;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit 0 ;;;;;;;;; 184.38 1.3211e-05 8828440000.0 5486810.0 5255660.0 3310210.0 2987210.0 4887790.0 4986340.0 3672040.0 3981190.0 3838310.0 4198950.0 False True 5182445.7116154395 5003170.204693511 3523591.433123268 3271113.5402625673 5272431.265279138 4955218.402471094 4043245.6388568557 3967380.181106728 3141369.6599210734 4161750.5697336663 1.2452562028355998 1.2021792562675595 0.846660888028367 0.7859946158358799 1.2668782467702169 1.1906572293178557 0.9715252202429819 0.9532960023984866 0.7548193019463219 1.0 21.988759070535878 -7.147264549278039 2.7487407323777595 0.8844902865333694 1.0771031497213586 0.2051278835140481 0.1634972688147958 0.5089764865862259 7.379070772063053 0.10134073255334473 0.0509739627754078 7.124189299110097e-08 7.147264549278039 0.1926128631879892 HDLGHFMLR ddPTM_KYSE-520_SHP099_60min_R1 1 HDLGHFMLR 9 0 M0R192;A0A2R8YEP4;P30043 M0R192 BLVRB Flavin reductase (NADPH) 0 143.04 0.00063983 662710000.0 2827600.0 2999900.0 2067800.0 2964700.0 3495700.0 2233900.0 1922500.0 2492700.0 2425600.0 1828800.0 False True 2670747.391319147 2855780.3010582984 2201093.696596977 3246464.196630444 3770791.702187754 2219957.4014768684 2116845.0617918903 2484053.4055005554 1985172.1844000488 1812598.2547848702 1.4734359278284348 1.5755175166475262 1.214330693956348 1.791055567917753 2.080324027805761 1.2247376911108998 1.167851208178025 1.3704379329193261 1.095208041362514 1.0 20.789627770161466 -6.480718535250621 24.979050356048692 1.1902510975585876 1.6144979493691716 0.5043824667972916 0.22536992739023876 463.95167084029407 274882.0381711487 0.0838789226919165 0.07396746632487847 3.305837217894064e-07 6.480718535250621 0.42424685181058397 HDS(ph)DT(ph)SPPRR ddPTM_KYSE-520_SHP099_60min_R1 3 HDSDTSPPRR 10 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(1)DT(0.965)S(0.035)PPRR;HDS(0.999)DT(0.83)S(0.17)PPRR;HDS(1)DT(0.636)S(0.364)PPRR 115.92 0.0041762 278462000.0 617520.0 602690.0 559920.0 548320.0 559300.0 547650.0 550740.0 588080.0 687750.0 538220.0 True False 583264.9346043997 573735.8677438671 596013.339103675 600432.1679415803 603313.7280183103 544231.9132095469 606414.1739044302 586040.0877389038 562871.936766629 533451.7895288238 1.0933789070603246 1.0755158741722932 1.117276857633394 1.1255603219025987 1.1309620472942694 1.0202082435420168 1.136774092444326 1.0985811637383935 1.0551505268429051 1.0 19.024998368447147 -8.016630264236312 2.7220089299981622 1.0003477626561494 1.1000974193904214 0.4886353524621221 0.03208980729727525 0.2287869990292192 4.0641228137685745 0.030760073249463792 0.008304091455656748 9.624312937133242e-09 8.016630264236312 0.09974965673427194 HDS(ph)DTS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 HDSDTSPPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(0.998)DT(0.1)S(0.903)PPR;HDS(0.997)DT(0.017)S(0.986)PPR 126.66 0.00097156 351680000.0 1251330.0 1127430.0 1009580.0 1115940.0 1075580.0 1133650.0 964560.0 1093820.0 1313450.0 1090510.0 True False 1181916.230435488 1073266.570493069 1074659.1421851146 1221998.6020804038 1160222.02678694 1126574.4698438838 1062067.137998432 1090025.793719506 1074960.5893800473 1080848.9298039416 1.093507332842416 0.9929848111962807 0.9942732166835287 1.1305914900633391 1.0734358843260325 1.0423052091546563 0.9826231110679671 1.0084904223546105 0.994552115229496 1.0 20.04373346108011 -6.653299700572652 5.272251073611378 0.9973574804893434 1.054296105502798 0.3466526900124127 0.03933680330237169 0.2794850594837174 11.890167043614818 0.01647616400882599 0.012577305096548232 2.2217761447336724e-07 6.653299700572652 0.05693862501345459 HDS(ph)DTS(ph)PPRR ddPTM_KYSE-520_SHP099_60min_R1 3 HDSDTSPPRR 10 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(0.97)DT(0.247)S(0.783)PPRR;HDS(0.998)DT(0.284)S(0.718)PPRR;HDS(0.998)DT(0.285)S(0.717)PPRR 66.215 0.019722999999999997 1347040000.0 1488670.0 1351870.0 1227520.0 1228130.0 1324500.0 1274930.0 1298760.0 1253460.0 1615940.0 1272960.0 True False 1406090.5075099298 1286924.136001761 1306647.9033014425 1344851.1059492498 1428730.6146258763 1266972.688958729 1430051.3354761186 1249112.0398197635 1322526.0305324113 1261682.5647478949 1.1144566365557171 1.0200062772991636 1.0356391851721691 1.0659187528821668 1.1324010131751012 1.0041929121941153 1.1334478064709301 0.9900366975978279 1.0482240679902508 1.0 20.26691754789337 -7.295742206858592 24.999318374434697 1.0143477862073014 1.0683210228156057 0.26869006729130607 0.04465572398108061 942.1509096117903 686619.3137781234 0.02333142650213722 0.011208574340102227 5.0612500392148485e-08 7.295742206858592 0.05397323660830433 HDS(ph)PDLAPNVTYSLPR ddPTM_KYSE-520_SHP099_60min_R1 14 HDSPDLAPNVTYSLPR 16 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(0.999)PDLAPNVT(0.001)YSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR;HDS(1)PDLAPNVTYSLPR 225.86 1.7958e-18 45540120000.0 7024140.0 6460400.0 5942516.0 6259109.0 6165641.0 6060428.0 6055906.0 6653476.0 7549400.0 6048450.0 True False 6634496.951924063 6150032.6867419 6325580.089721779 6853972.837490265 6650841.869001515 6022602.620850379 6668096.078426981 6630396.644688968 6178619.264886921 5994865.43862289 1.1066965588885855 1.0258833579681905 1.0551663176571415 1.1433072030828977 1.109423044953168 1.0046268231558273 1.1123012095428688 1.1060125890352042 1.0306518683605752 1.0 22.51529594044321 -7.951010133395936 4.955434933226227 1.0003274524360033 1.081148779739044 0.3186026626238666 0.04064604944897897 0.21061415598758124 10.775813522189928 0.04023495756093014 0.010497209328338525 1.1194117639205501e-08 7.951010133395936 0.0808213273030407 HDS(ph)PDPS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 5 HDSPDPSPPR 10 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(1)PDPS(1)PPR;HDS(1)PDPS(1)PPR;HDS(1)PDPS(1)PPR;HDS(1)PDPS(1)PPR;HDS(1)PDPS(1)PPR 106.79 0.0022959 2589150000.0 2249130.0 2144120.0 1926540.0 1909110.0 2424820.0 2299510.0 2093990.0 2363360.0 2562920.0 2671980.0 True False 2124366.275370501 2041113.256810268 2050727.8509729889 2090551.2404051472 2615639.538661474 2285157.9051300776 2305670.9445730057 2355162.0557723725 2097558.3339555454 2648308.3359689843 0.8021597207989835 0.7707234195837884 0.7743538858826468 0.7893911792715177 0.9876642772807808 0.8628745656588985 0.87062027984343 0.8893081004899858 0.7920370545479078 1.0 21.336639670652414 -5.619742734266782 11.434835997686852 0.8914797944742751 0.7813557431105651 0.4939902748633265 0.057245851415274725 0.37295728250616983 41.280736003626394 0.016338148603565805 0.021092525923337234 2.4002543516197196e-06 5.619742734266782 -0.11012405136370995 HDS(ph)PDPS(ph)PPRR ddPTM_KYSE-520_SHP099_60min_R1 4 HDSPDPSPPRR 11 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDS(1)PDPS(1)PPRR;HDS(1)PDPS(1)PPRR;HDS(1)PDPS(1)PPRR;HDS(1)PDPS(1)PPRR 88.28200000000001 0.0020219 2406900000.0 1057640.0 997970.0 1041870.0 1014610.0 1107060.0 1027700.0 1031270.0 1029950.0 1195750.0 1084250.0 True False 998970.6008469316 950026.0232164909 1109030.6072509405 1111038.2293463813 1194179.3236902389 1021285.743094041 1135520.8358252908 1026377.3438421371 978631.9424045021 1074644.3885337352 0.9295824846858836 0.8840375787126419 1.0319977651063925 1.0338659385383313 1.1112320842428622 0.9503476256806238 1.0566479925276644 0.9550855657865999 0.9106565416860974 1.0 20.035427904697453 -4.761419619619929 24.999999517653695 1.0091671381124687 0.9068100116520694 0.33674202324354074 0.055689368774973186 0.5672535554269238 711220.2919834116 0.014948233111259155 0.03475740891435813 1.732129588244563e-05 4.761419619619929 -0.1023571264603993 HDS(ph)PEDVK ddPTM_KYSE-520_SHP099_60min_R1 9 HDSPEDVK 8 0 P31948;P31948-2;P31948-3;H0YGI8 P31948 STIP1 Stress-induced-phosphoprotein 1 1 HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK;HDS(1)PEDVK 123.51 0.00090197 37598760000.0 33705700.0 30371630.0 29337180.0 28646530.0 31379350.0 29645360.0 29099620.0 29990760.0 35492690.0 28971380.0 True False 31835977.630352885 28912531.306053933 31228301.563947663 31369087.59830672 33848726.32092145 29460332.31185203 32041293.57452304 29886729.05345597 29048112.193904124 28714716.11259258 1.1086990205830904 1.006888983080512 1.0875364897044122 1.092439412435984 1.1787936954764946 1.0259663440981213 1.1158492199221715 1.0408157592876015 1.0116106347701392 1.0 24.775286962833288 -7.531443454683665 3.244770847607079 1.006506525014777 1.0861846053340087 0.3564354754525868 0.04483229996610602 0.29241556448545875 6.243372078240885 0.03396196584473204 0.012024546501038564 2.941416642447411e-08 7.531443454683665 0.07967808031923163 HDS(ph)PEDVKR ddPTM_KYSE-520_SHP099_60min_R1 9 HDSPEDVKR 9 1 P31948;P31948-2;P31948-3;H0YGI8 P31948 STIP1 Stress-induced-phosphoprotein 1 1 HDS(1)PEDVKR;HDS(1)PEDVKR;HDS(1)PEDVKR;HDS(1)PEDVKR;HDS(1)PEDVKR;HDS(1)PEDVKR;HDS(1)PEDVKR;HDS(1)PEDVKR;HDS(1)PEDVKR 172.13 4.7579e-05 31945739000.0 14482072.0 13345495.0 11990474.0 12474922.0 13164488.0 12544137.0 12199742.0 13319270.0 15788469.0 12034629.0 True False 13678722.596865203 12704357.388203628 12763399.139476718 13660534.836157938 14200458.3099094 12465844.38797163 13433010.979368074 13273068.56111099 12921681.024514554 11928011.549859677 1.1467730844900232 1.065085939521335 1.0700357797378952 1.1452482904678813 1.1905134607349082 1.0450898991725306 1.126173538918656 1.1127645631150598 1.0833055426297409 1.0 23.507850223903713 -8.183568566029482 2.4509915260861295 1.000037241565555 1.1115861974161618 0.4019583868284017 0.0414031780932542 0.7877925853663337 8.180961605459961 0.04061689673591833 0.011020725609965688 6.552868215612552e-09 8.183568566029482 0.11154895585060687 HDT(ph)PDPS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 5 HDTPDPSPLR 10 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(1)PDPS(1)PLR;HDT(1)PDPS(1)PLR;HDT(1)PDPS(1)PLR;HDT(1)PDPS(1)PLR;HDT(1)PDPS(1)PLR 147.24 0.00029557 4904400000.0 5561080.0 5199550.0 4784460.0 4738150.0 5147190.0 4920660.0 4805560.0 4900530.0 6081610.0 4789530.0 True False 5252595.806661863 4949755.813316331 5092873.947006666 5188462.351423254 5552244.569495036 4889948.335713845 5291352.902545975 4883531.205222297 4977342.928912096 4747098.490397957 1.106485533697349 1.0426907769721425 1.0728393264450096 1.0929755011230653 1.169608041780819 1.0300920331871843 1.114649909465517 1.0287402326074138 1.0485021406191295 1.0 22.178614551708893 -7.6761153755902765 1.1657891684866826 1.0047245341674012 1.0893104186632223 0.3565669214022429 0.03862060420810624 0.5128973632578275 1.3646428175528658 0.03577555290201046 0.011936455762167309 2.108068041723837e-08 7.6761153755902765 0.08458588449582116 HDT(ph)PDPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 HDTPDPSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(1)PDPS(1)PR;HDT(1)PDPS(1)PR;HDT(1)PDPS(1)PR 120.03 0.0029335 3254270000.0 1498290.0 1402570.0 1362370.0 1318400.0 1453310.0 1435020.0 1388420.0 1478170.0 1635200.0 1415910.0 True False 1415176.866932933 1335188.4318995092 1450190.5500690711 1443700.3396085869 1567677.2287972334 1426063.5078863583 1528775.0432733912 1473042.5732774723 1338288.9000374994 1403366.1389613121 1.008415998964007 0.9514184465699992 1.0333657837450856 1.0287410387977065 1.1170835502398073 1.0161735190089776 1.0893629259181778 1.0496495051303791 0.9536277546414373 1.0 20.420460027284435 -4.872725109306017 6.455640940294288 1.0422224041848074 0.9803913484409228 0.19277226726428598 0.044742204078159487 0.2837343781673188 14.86184290272706 0.011572089357650568 0.024584722591254785 1.3405249165481485e-05 4.872725109306017 -0.06183105574388459 HDT(ph)PDS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 HDTPDSSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(1)PDS(0.5)S(0.5)PR 67.563 0.043328 307980000.0 366250.0 290190.0 261810.0 341540.0 294960.0 328080.0 326680.0 289800.0 373220.0 298790.0 True False 345933.3823987263 276248.83681592986 278686.69151081133 373999.8589122551 318171.67390717176 326032.3310249028 359704.00248955743 288794.7514398283 305452.6561105648 296142.9530551026 1.1681297117826717 0.9328225911373582 0.9410546110781733 1.2629031184228985 1.0743854298230433 1.1009288847208827 1.2146296198465616 0.9751869779798304 1.0314365172610742 1.0 18.175934230961698 -3.0311395064918303 14.147206673954868 1.0723984338917738 83.51896548208626 0.0 0.10936464332979205 0.0 0.0 0.025305821668095453 0.0 0.0009308088278446744 3.0311395064918303 82.44656704819448 HDT(ph)PDS(ph)SPRR ddPTM_KYSE-520_SHP099_60min_R1 5 HDTPDSSPRR 10 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(1)PDS(0.584)S(0.417)PRR;HDT(1)PDS(0.954)S(0.046)PRR;HDT(1)PDS(0.621)S(0.379)PRR;HDT(1)PDS(0.567)S(0.433)PRR;HDT(1)PDS(0.572)S(0.428)PRR 138.24 0.0012190999999999999 1148943000.0 1368326.0 1214035.0 1116908.0 1368234.0 1238353.0 1179837.0 1167036.0 1229940.0 1487326.0 1136820.0 True False 1292422.229089745 1155710.9362963135 1188905.6767959865 1498270.547985449 1335804.3358352578 1172473.1996446857 1285011.3880537646 1225673.6252101543 1217265.0908373145 1126748.659232577 1.1470368466823893 1.0257042924581445 1.055164935901272 1.329729159834025 1.1855388731902885 1.0405809583507748 1.1404596557753879 1.08779683487261 1.0803341817742989 1.0 20.10373430265265 -8.029909359736495 0.8244197560677504 1.0011788750714616 1.1349108019951073 0.198582657805215 0.08238223852952296 1.272782704981303 1.9583301676218532 0.08607088909186349 0.031321583851565506 9.334490977543172e-09 8.029909359736495 0.13373192692364566 HDT(ph)PDSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 HDTPDSSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(1)PDS(0.081)S(0.919)PR;HDT(1)PDS(0.002)S(0.998)PR;HDT(1)PDS(0.331)S(0.669)PR 155.47 0.00019534 658720000.0 721010.0 579900.0 533490.0 686730.0 619130.0 660620.0 694280.0 588440.0 729280.0 653720.0 True False 681014.1380021982 552040.7335523542 567879.6190141801 751996.612727097 667852.0086321768 656496.8255354539 764464.597919831 586398.838982929 596861.1356527321 647928.5493864645 1.0510636375678506 0.8520086575519658 0.876454077462578 1.1606165732921885 1.030749469620652 1.0132241065115941 1.179859412961069 0.9050362721911249 0.9211835721977537 1.0 19.305475202470657 -3.9258360665352168 20.98318694499363 0.996659076238977 3.0092038433784145 0.025416791084005852 0.10552554971527124 3128.653228631505 995525.436610037 0.026801938639557387 36894.558400087655 0.00011862164256757959 3.9258360665352168 2.0125447671394374 HDT(ph)PDSS(ph)PRR ddPTM_KYSE-520_SHP099_60min_R1 2 HDTPDSSPRR 10 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HDT(1)PDS(0.377)S(0.623)PRR;HDT(0.995)PDS(0.073)S(0.932)PRR 118.76 0.0036152000000000003 510313000.0 802510.0 780580.0 711490.0 789420.0 735330.0 693170.0 752430.0 724800.0 898380.0 675680.0 True False 757993.1705359765 743079.7651255325 757353.7838242509 864446.2394522228 793196.2875446186 688843.6689116441 828492.9674091407 722285.8379695909 735256.8383168364 669694.0008710853 1.1318500233689395 1.1095810387415637 1.1308952787976967 1.2908077992752198 1.184415996728194 1.0285946537010193 1.2371216799486064 1.0785311456129192 1.0978996935323775 1.0 19.353142518860928 -8.011929909174954 0.9704443217640827 1.000846602848445 1.1588313281549065 0.32324284781798307 0.06959482884679109 0.7355256843720768 1.560264029277411 0.06803590055365723 0.02306187416915515 9.729042282070322e-09 8.011929909174954 0.15798472530646146 HDVVFLITK ddPTM_KYSE-520_SHP099_60min_R1 2 HDVVFLITK 9 0 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ; 149.72 0.00047724 1040500000.0 2117490.0 1834350.0 1247580.0 1115340.0 1750740.0 1820540.0 1233910.0 1315540.0 1197630.0 1387890.0 False True 2000028.6085883377 1746225.0725845166 1328001.002998577 1221341.5782608 1888513.2776520264 1809177.3345649755 1358645.664601109 1310976.6987893446 980170.5817954442 1375594.3743620794 1.4539377638236086 1.2694331302382027 0.9654015949392251 0.8878646213039271 1.3728707479832556 1.3151968111268022 0.9876789916585474 0.9530256325723193 0.7125433195014267 1.0 20.391623690260424 -6.956910965102736 4.185927974947049 0.8873379319754069 1.1945891308411438 0.4077172585160893 0.1774310239421855 0.24556236168370726 9.317971402677635 0.087165800042322 0.05533293241074516 1.1043049907349951e-07 6.956910965102736 0.30725119886573693 HDWDYCEHR ddPTM_KYSE-520_SHP099_60min_R1 4 HDWDYCEHR 9 0 P17568 P17568 NDUFB7 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 0 ;;; 190.88 5.291900000000001e-06 2349010000.0 606091.0 994079.0 799129.0 1219900.0 1122976.0 880812.0 1080846.0 1106658.0 1463170.0 492350.0 False True 572469.9240175461 946321.9526969997 850642.1339916077 1335838.9292236918 1211347.8223405883 875314.525587379 1190108.461720426 1102819.2616939188 1197495.2115141079 487988.16204250325 1.1731225643291008 1.9392313713843248 1.7431614128326287 2.73744126011676 2.4823303443887257 1.7937208188077727 2.438806008611268 2.259930357896396 2.453943158174004 1.0 18.89648662474603 -4.156087827928708 1.3434503566218068 2.2083152499021463 0.5738751666559305 0.25205221917666887 0.4767244493192036 2.056750995593604 2.765259588530065 0.13115212928502143 4.888515331770656 6.98091213921796e-05 4.156087827928708 -1.6344400832462158 HEAFESDLAAHQDR ddPTM_KYSE-520_SHP099_60min_R1 2 HEAFESDLAAHQDR 14 0 P12814-3;P12814;P12814-2;P12814-4;H9KV75;A0A494C1A0;P35609;P35609-2;H7C5W8;F6THM6;Q08043;A0A087WSZ2;A0A494C060;O43707;O43707-2 P12814-3;O43707 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 0 ; 193.96 8.2565e-11 784670000.0 134501.0 165682.0 108899.0 120423.0 132014.0 136642.0 99068.0 114276.0 122402.0 97464.0 False True 127039.9614089039 157722.3880262477 115918.80378456057 131867.96571350493 142402.75074308834 135789.16659322352 109082.76025050668 113879.60322821893 100176.88230332085 96600.54478584456 1.3151060554631553 1.6327277281500352 1.1999808493993798 1.3650851142283447 1.4741402448483443 1.405677026917984 1.1292147522804779 1.1788712318411931 1.037021918721108 1.0 16.559743704817745 -6.792340244372217 4.674538377963043 1.0954136835216293 1.40341739685381 0.6470183318295679 0.11316311868277452 0.13118113080070964 6.701065016849235 0.04740735519261861 0.03262094297938606 1.6130942964461312e-07 6.792340244372217 0.3080037133321807 HEAMITDLEER ddPTM_KYSE-520_SHP099_60min_R1 1 HEAMITDLEER 11 0 P35579 P35579 MYH9 Myosin-9 0 142.08 3.641e-05 0.0 171650.0 168790.0 125530.0 127540.0 187520.0 172280.0 141950.0 170450.0 153340.0 178010.0 False True 162128.23232420828 160681.0750410446 133621.86465510144 139661.3632537009 202276.75715714943 171204.7366159787 156299.69129849618 169858.74873332903 125497.32138683362 176432.96988968455 0.9189225371288576 0.9107202307001413 0.7573520115806534 0.7915831340424907 1.1464793529442021 0.9703670279031474 0.885887095797476 0.9627381369793521 0.7113031167887801 1.0 17.428760655807338 -4.525879259990315 24.977946305466514 0.9034085734732651 0.916872027826623 0.0016566449740704758 0.12143718568415715 1534.121081932468 12770961.008382639 0.032140162807707644 0.08582948676534305 2.979344614250153e-05 4.525879259990315 0.01346345435335794 HEANNPQLK ddPTM_KYSE-520_SHP099_60min_R1 4 HEANNPQLK 9 0 P31948;P31948-2;P31948-3;F5H783;F5GXD8 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ;;; 118.18 0.001354 1270070000.0 1775870.0 1511050.0 1079920.0 1187870.0 1619390.0 1725380.0 1377300.0 1766410.0 1429630.0 1576070.0 False True 1677358.9509909227 1438456.8898677086 1149533.3711330916 1300764.807653861 1746826.7799312938 1714611.263422786 1516530.925152652 1760282.7359931953 1170045.2300395137 1562107.2459639045 1.073779636657342 0.9208438752104392 0.7358863318144123 0.8326987862163194 1.1182502254212432 1.09762711097648 0.97082382088105 1.1268642025323976 0.7490172221290303 1.0 20.575062073962147 -5.748200437118656 24.99934845245219 1.0191531547262853 0.8818825699154922 0.16878208432960706 0.12858168993721752 386.47384824908085 729782.8065891691 0.03852008116454096 0.04942732658236802 1.785663259050588e-06 5.748200437118656 -0.13727058481079313 HEAPSS(ph)PISGQPCGDDQNASPSK ddPTM_KYSE-520_SHP099_60min_R1 1 HEAPSSPISGQPCGDDQNASPSK 23 0 A0A088AWL3;O75376-2;O75376;O75376-3;E7EVU5;E7EW50;J3KS51 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 HEAPS(0.135)S(0.865)PISGQPCGDDQNASPSK 204.89 5.1519e-16 437080000.0 156100.0 162550.0 141990.0 171960.0 122960.0 139500.0 123890.0 139450.0 174950.0 139380.0 True False 147440.82182236464 154740.8540074759 151142.9025920325 188303.02669834078 132636.2524533016 138629.32875510235 136414.01024988169 138966.28049787454 143183.49013060212 138145.20163599926 1.0672887662856256 1.1201319493905026 1.0940872415553098 1.3630804723460688 0.9601220374109463 1.0035044801655777 0.9874683205379865 1.0059435930611529 1.0364709626895208 1.0 17.07582592658959 HECQANGPEDLNR ddPTM_KYSE-520_SHP099_60min_R1 2 HECQANGPEDLNR 13 0 P60981;P60981-2 P60981 DSTN Destrin 0 ; 168.82 4.3422000000000005e-06 435990000.0 424330.0 419500.0 347580.0 341780.0 428800.0 452730.0 366220.0 451830.0 456520.0 431700.0 False True 400791.56901911605 399346.59031766234 369985.5629476631 374262.6684400964 462544.12046174105 449904.3441383334 403241.09156277025 450262.7071879153 373627.47593268094 427875.4738575174 0.9367014318576711 0.9333243308323973 0.8647038345340362 0.8746999800337373 1.081025084919376 1.0514843023887637 0.9424262810096229 1.052321842915102 0.8732154534688261 1.0 18.70683145940844 -5.741791880221006 24.999915049042812 1.0023825838057705 0.9018797590455456 0.39066402551061064 0.05974634510771112 253.39537559558192 322424.4825437207 0.017646367591646558 0.022749061534859043 1.812208319262636e-06 5.741791880221006 -0.10050282476022487 HEDEDQIS(ph)EQDIFEGLPGALSK ddPTM_KYSE-520_SHP099_60min_R1 1 HEDEDQISEQDIFEGLPGALSK 22 0 P17040-2;P17040-3;P17040 P17040-2 ZSCAN20 Zinc finger and SCAN domain-containing protein 20 1 HEDEDQIS(1)EQDIFEGLPGALSK 102.6 0.00073804 24760000.0 87335.0 95680.0 83101.0 77225.0 86816.0 75598.0 89387.0 84659.0 109450.0 82947.0 True False 82490.35345199371 91083.3891813921 88457.8234263011 84564.44078145712 93647.92528452999 75126.16484034568 98423.11029305159 84365.33768855906 89576.63900997082 82212.15411178958 1.0033839198499268 1.1079066126589956 1.075970145558026 1.0286123955159838 1.1391007363362649 0.9138084952523128 1.1971844231111965 1.0261905748612503 1.089579028523778 1.0 16.327064074923467 -10.130148959042364 3.9893304159924248 0.9999791372477627 1.06570536407116 0.0638027315712052 0.07417803898241984 33541920.254568703 0.1866105438147783 6857.610845762922 0.016923209796183555 7.41056022255905e-11 10.130148959042364 0.06572622682339735 HEDEQALLDQNSQT(ph)PPPS(ph)PFSVQAFNK ddPTM_KYSE-520_SHP099_60min_R1 2 HEDEQALLDQNSQTPPPSPFSVQAFNK 27 0 A0A499FJI4;O75592-2;O75592;A0A087WY34 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 2 HEDEQALLDQNS(0.028)QT(0.973)PPPS(0.999)PFSVQAFNK;HEDEQALLDQNS(0.388)QT(0.613)PPPS(0.998)PFS(0.001)VQAFNK 171.2 3.6993999999999997e-10 614600000.0 163798.0 213684.0 208096.0 256740.0 297720.0 515850.0 594680.0 789370.0 858880.0 710400.0 True False 154711.79841678226 203418.29989377697 221510.2011253726 281140.49240830453 321148.87020491966 512630.38880515774 654796.0579175034 786631.8597103426 702929.0426028675 704106.4086828367 0.21972786571592176 0.288902781433717 0.31459762103252126 0.39928693865211456 0.4561084322548476 0.7280581208799523 0.9299674734425759 1.1172059365030993 0.9983278577421676 1.0 19.425433948297094 -6.389608710578694 1.147822166525902 1.0607688832362978 0.2809081613569308 0.9791243374487771 0.04736856330401078 0.06088524812789921 0.165103708190212 0.02656675336162365 0.021290356052205674 4.077474835386328e-07 6.389608710578694 -0.779860721879367 down HEDEQALLDQNSQT(ph)PPPSPFSVQAFNK ddPTM_KYSE-520_SHP099_60min_R1 9 HEDEQALLDQNSQTPPPSPFSVQAFNK 27 0 A0A499FJI4;O75592-2;O75592;A0A087WY34 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 HEDEQALLDQNS(0.049)QT(0.951)PPPSPFSVQAFNK;HEDEQALLDQNS(0.433)QT(0.567)PPPSPFSVQAFNK;HEDEQALLDQNS(0.014)QT(0.986)PPPSPFSVQAFNK;HEDEQALLDQNS(0.058)QT(0.942)PPPSPFSVQAFNK;HEDEQALLDQNSQT(0.997)PPPS(0.003)PFSVQAFNK;HEDEQALLDQNS(0.011)QT(0.989)PPPSPFSVQAFNK;HEDEQALLDQNS(0.003)QT(0.997)PPPSPFSVQAFNK;HEDEQALLDQNSQT(1)PPPSPFSVQAFNK;HEDEQALLDQNSQT(1)PPPSPFSVQAFNK 267.78 6.6904e-41 11579120000.0 3202797.0 3614933.0 2945563.0 2624305.0 2786083.0 3199328.0 2535014.0 3094968.0 4099129.0 2993438.0 True False 3025131.4657924664 3441266.1925549465 3135438.704047435 2873718.1581739304 3005331.881456181 3179359.8072215323 2791277.95447246 3084232.278378961 3354830.50423301 2966918.4681795263 1.0196206934020196 1.1598789213329734 1.0567997529002915 0.9685868314194752 1.0129472426319233 1.0716033626540329 0.9408003571413144 1.0395406248798664 1.1307457687880123 1.0 21.500533850989253 -4.998445186606108 24.9986507042818 1.0224211797788934 1.0943971989253276 0.17069096897048575 0.05871807335374241 80.65500105381147 1296687.7201693938 0.01512794959365204 0.03114245462164696 1.0035865063204266e-05 4.998445186606108 0.07197601914643426 HEDGTQS(ph)DSEDPLAK ddPTM_KYSE-520_SHP099_60min_R1 1 HEDGTQSDSEDPLAK 15 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 HEDGT(0.034)QS(0.921)DS(0.045)EDPLAK 105.02 0.00069739 895540000.0 244980.0 240490.0 213990.0 219020.0 192840.0 214730.0 190630.0 265600.0 260250.0 205000.0 True False 231390.47104447722 228936.49941715054 227784.13779610564 239835.59494923602 208015.41089049028 213389.7904199507 209900.74076951257 264678.69559150626 212995.16036861535 203183.85948758654 1.1388230916964837 1.1267455003291604 1.1210739788611115 1.1803870423274871 1.0237792087180966 1.0502300279072496 1.0330581439828217 1.3026561079162724 1.048287796608314 1.0 17.632426276339796 -7.993308903585922 24.999489060731996 0.999999866815996 1.1192649064829292 0.21769184225990534 0.0768927446043893 197.93180157733 739514.927203298 0.07508413943631481 0.019386641430098012 1.0155261157670628e-08 7.993308903585922 0.11926503966693325 HEDLQTDES(ph)SMDDRHPR ddPTM_KYSE-520_SHP099_60min_R1 2 HEDLQTDESSMDDRHPR 17 1 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 1 HEDLQTDES(0.5)S(0.5)MDDRHPR;HEDLQTDES(0.5)S(0.5)MDDRHPR 145.77 5.2828e-06 82792000.0 55634.0 59164.0 53187.0 49933.0 53369.0 45549.0 43202.0 50272.0 65162.0 43189.0 True False 52547.871116370545 56321.67263302548 56615.51912220886 54678.61730709611 57568.83667192786 45264.71179545636 47569.27977088857 50097.61816557298 53330.223400344694 42806.37906053357 1.2275710365985708 1.3157308295891974 1.3225953786501643 1.277347407258477 1.3448658339103696 1.057429121286956 1.111266143385304 1.1703306671823068 1.2458475715717299 1.0 15.38553818442912 -6.256577457724348 24.996269675773256 1.1272635813655798 1.2988891739553334 0.6391572999210104 0.06764284157536342 282.4228423870251 1452004.1787453352 0.02266584403044016 0.02198245767650389 5.538887474079733e-07 6.256577457724348 0.17162559258975363 HEDLVPPAGS(ph)PELS(ph)PPQPLFRPR ddPTM_KYSE-520_SHP099_60min_R1 2 HEDLVPPAGSPELSPPQPLFRPR 23 1 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 2 HEDLVPPAGS(1)PELS(1)PPQPLFRPR;HEDLVPPAGS(1)PELS(1)PPQPLFRPR 61.89 0.035787 1117570000.0 598480.0 606350.0 524040.0 451870.0 474170.0 496320.0 487900.0 459830.0 608490.0 483050.0 True False 565281.1213596981 577220.0358500943 557820.4568936457 494815.5889403308 511484.4813417537 493222.2827794434 537221.6934451313 458234.95705512905 498003.55478462536 478770.55280721275 1.1806931692963178 1.2056297791617194 1.1651102049257906 1.0335129970693475 1.0683290322320929 1.0301850852929335 1.1220859142133897 0.9571076465925572 1.0401716477018945 1.0 18.868974895253185 -5.1992870126073605 3.7840387102073216 1.0382512833224566 1.1916690569762654 0.7363303440758674 0.040693290888073816 0.11735404325093571 3.3725697222861517 0.011287775717117188 0.020233297363659645 6.319940468270955e-06 5.1992870126073605 0.1534177736538087 HEEAPGHRPTTNPNASK ddPTM_KYSE-520_SHP099_60min_R1 1 HEEAPGHRPTTNPNASK 17 1 E9PP21;P21291;E9PS42;E9PND2 E9PP21 CSRP1 Cysteine and glycine-rich protein 1 0 86.455 0.007398100000000001 513340000.0 439160.0 451820.0 355890.0 386890.0 424030.0 437370.0 318760.0 350350.0 388390.0 309180.0 False True 414798.9193562446 430113.8890043541 378831.23884413333 423659.90927727974 457398.7485993288 434640.2115958358 350983.3715978066 349134.71762230457 317868.16651514504 306440.9057384005 1.3536016621434546 1.4035785724100733 1.2362293406335585 1.382517481654181 1.4926164883150308 1.4183491937818353 1.1453541776744083 1.1393215170834616 1.0372902591095317 1.0 18.225249364933813 -6.871625291585096 3.86245686164744 1.0777890452192067 1.3807662932994873 0.819154653089575 0.06975226243198177 0.10541375247176221 2.9350762491652014 0.03359012664101617 0.02204431391419442 1.3439239960093265e-07 6.871625291585096 0.3029772480802806 HEEEEWT(ph)DDDLVESL ddPTM_KYSE-520_SHP099_60min_R1 6 HEEEEWTDDDLVESL 15 0 D6RHI7;P51946 D6RHI7 CCNH Cyclin-H 1 HEEEEWT(1)DDDLVESL;HEEEEWT(1)DDDLVESL;HEEEEWT(1)DDDLVESL;HEEEEWT(1)DDDLVESL;HEEEEWT(1)DDDLVESL;HEEEEWT(1)DDDLVESL 138.42 6.084600000000001e-05 6212990000.0 2337830.0 2298310.0 2075790.0 2073850.0 2176660.0 2238990.0 1963320.0 2225140.0 2723770.0 2206620.0 True False 2208145.9095514375 2187895.737766358 2209598.74478143 2270948.0804742603 2347950.7584987246 2225015.632898832 2161791.5457567 2217421.5086915805 2229202.028654077 2187071.063524381 1.0096361048246394 1.000377067876637 1.0103003883288304 1.0383512993010455 1.0735594273352473 1.0173494908360705 0.9884413825461419 1.0138772103354936 1.019263647090554 1.0 21.060568667318126 -5.017365374597612 22.002524547300595 1.0228617955613253 1.0050896064300028 0.09033558494907579 0.021643786029650326 372.06647865952135 471431.40077836596 0.006505008705806627 0.011652055857798355 9.608036083235004e-06 5.017365374597612 -0.017772189131322502 HEEFEEGCK ddPTM_KYSE-520_SHP099_60min_R1 2 HEEFEEGCK 9 0 F6TLX2;Q9HC38-2;I3L3Q4;Q9HC38-3;I3L1F4 F6TLX2 GLOD4 Glyoxalase domain-containing protein 4 0 ; 122.13 0.00046137 251020000.0 423090.0 424990.0 265560.0 232917.0 366610.0 396590.0 280570.0 334270.0 340750.0 353550.0 False True 399620.3542909947 404572.8424770047 282678.4225110229 255053.36165095036 395460.1212744378 394114.7347024086 308932.7536993245 333110.4953892041 278878.38960847515 350417.8220577375 1.1404110440054906 1.154544138483756 0.80668962797345 0.7278549936564751 1.1285388367298248 1.1246994584581125 0.8816125614992903 0.950609456542762 0.7958453367777767 1.0 18.41871662591831 -4.740439079067573 24.97590955827122 0.9307452230510049 1.1474778413403413 0.3279230705701871 0.12617349392947422 301.4475367042857 358509.5390257538 0.03449766873979932 0.09106580678750405 1.8178620399555366e-05 4.740439079067573 0.21673261828933632 HEENEKDKCENHHEK ddPTM_KYSE-520_SHP099_60min_R1 1 HEENEKDKCENHHEK 15 2 O94972-3;O94972 O94972-3 TRIM37 E3 ubiquitin-protein ligase TRIM37 0 146.78 3.6867e-06 374080000.0 140600.0 125690.0 134460.0 131470.0 101020.0 96935.0 121190.0 94431.0 208740.0 23564.0 False True 132800.6377208489 119651.66373546366 143127.50674360676 143964.8692721033 108969.6992748252 96329.99270878754 133441.06790042095 94103.4409013611 170838.07790718428 23355.241292514598 5.686117135660327 5.123118285821875 6.128282082424017 6.164135384815927 4.665749238469662 4.124555661930219 5.713538397190059 4.029221523458268 7.3147639867004175 1.0 14.511458729834889 -5.775796742669765 23.78075870448037 4.670539590990129 5.754025510179961 0.14285449681845308 1.5156831722889972 297.4520936680794 492680.7836681177 0.439607009154983 0.5010843783867133 1.675726961735177e-06 5.775796742669765 1.0834859191898323 HEENHRPLFHK ddPTM_KYSE-520_SHP099_60min_R1 2 HEENHRPLFHK 11 1 E7EMB6;E5RIA4;E7ETB3;Q9ULA0-2;Q9ULA0 E7EMB6 DNPEP Aspartyl aminopeptidase 0 ; 142.08 0.00032608 713080000.0 629150.0 504910.0 456840.0 596860.0 407890.0 459910.0 507740.0 517680.0 608900.0 219370.0 False True 594249.7953205693 480653.36571463855 486288.6373698439 653585.3949474978 439988.6224233663 457039.5310950482 559067.3142648713 515884.2889074204 498339.10911988356 217426.5524672776 2.733105908994271 2.2106470449922453 2.2365650922190365 3.006005418983321 2.0236195507426995 2.1020410152703497 2.5712927327448205 2.3726830189475607 2.291988275879428 1.0 17.730168609713292 -10.686544988836472 0.4752426450473089 1.018060028588504e-12 2.4176411380132916 0.68883009186397 0.28235686436978646 26.315406923166826 2.4393788486865904 30.73937532167101 0.1449101287980873 2.05804568526202e-11 10.686544988836472 2.4176411380122738 HEENLK ddPTM_KYSE-520_SHP099_60min_R1 2 HEENLK 6 0 P42766 P42766 RPL35 60S ribosomal protein L35 0 ; 123.1 0.012228 346120000.0 177635.0 411450.0 123415.0 126213.0 341630.0 591910.0 257600.0 202945.0 172659.0 2174700.0 False True 167781.23244340654 391683.3244009589 131370.52837098177 138208.2455726778 368514.33739119535 588215.6701321345 283640.7219337274 202241.0311627192 141308.4779791919 2155433.8498909967 0.07784104924022209 0.18171901885124744 0.0609485317202499 0.0641208476797686 0.17096991281353016 0.2728989665639154 0.13159333187055194 0.09382845647197516 0.06555918103742227 1.0 21.039546856313493 -11.10467449417147 2.4911617045456698 2.590569217983532 0.12748578978682726 0.9427876616743662 0.06470597052666097 8785622.383245725 2533433.305725502 79188318.55148529 0.01835999110128968 7.858243931522336e-12 11.10467449417147 -2.463083428196705 HEHPPNPPVS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 5 HEHPPNPPVSPGK 13 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 HEHPPNPPVS(1)PGK;HEHPPNPPVS(1)PGK;HEHPPNPPVS(1)PGK;HEHPPNPPVS(1)PGK;HEHPPNPPVS(1)PGK 112.56 9.8048e-05 4895760000.0 2511780.0 2529850.0 2340550.0 2506410.0 2590600.0 2607340.0 2479610.0 2578440.0 2707810.0 2391020.0 True False 2372446.556290706 2408312.2086177357 2491425.5980124096 2744618.4528203546 2794465.4815022997 2591066.6239163363 2730273.17746153 2569495.9934524214 2216139.9623352177 2369837.422985411 1.0011009756534306 1.0162352004652944 1.0513065469587477 1.1581463041303535 1.1791802485682592 1.0933520581560534 1.1520930300872956 1.0842499019259684 0.935144301816041 1.0 21.176356659208103 -7.718300219757802 7.898891824069814 0.9678271603735668 1.095521948321198 0.42414368685384674 0.05787496938117698 0.21090096332106986 33.58216366426065 0.04496520455098669 0.016485300214270093 1.9129330925168393e-08 7.718300219757802 0.12769478794763123 HEHQVMLMR ddPTM_KYSE-520_SHP099_60min_R1 1 HEHQVMLMR 9 0 Q15233-2;Q15233;H7C367;C9JYS8 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 0 74.16199999999999 0.011193 159870000.0 61838.0 100260.0 105230.0 63205.0 78468.0 93936.0 72440.0 76562.0 68707.0 74246.0 False True 58407.722869003155 95443.35910667194 112013.2941739529 69211.9841967238 84642.98517815272 93349.71058021001 79762.94214627033 76296.42429170509 56231.54076252235 73588.23820251401 0.7937100315986062 1.2969920389181335 1.522163010149714 0.9405305234547564 1.1502243734279407 1.2685411807701206 1.0839088432415465 1.0368018878470522 0.7641376140542159 1.0 16.167187574596586 -7.378904531315848 2.3829835100423336 0.8877014193286279 1.1712490126673436 0.22367752897010906 0.19547767807186806 0.44753075935257813 4.764604127587088 0.14443865665540906 0.055109105318834575 4.1792222620657475e-08 7.378904531315848 0.2835475933387157 HEIVPK ddPTM_KYSE-520_SHP099_60min_R1 1 HEIVPK 6 0 P25788-2;P25788;G3V4X5;H0YJ03 P25788-2 PSMA3 Proteasome subunit alpha type-3 0 77.374 0.049882 715780000.0 2713400.0 2433700.0 1598500.0 1522400.0 2366600.0 2230000.0 1658200.0 2267100.0 1954000.0 1959400.0 False True 2562882.292971203 2316781.3989418237 1701541.8676904282 1667088.4382737484 2552837.95588796 2216081.7428234997 1825827.0384724627 2259235.9592451164 1599202.8563315056 1942041.240390131 1.3196847933344367 1.1929619983128743 0.8761615522380001 0.8584207191907273 1.3145127419514158 1.1411095175189572 0.9401587363333631 1.1633305782895038 0.8234649311619389 1.0 20.88914240688591 -4.554215525817206 7.01218693545958 1.0273696047302217 1.2898034698467966 0.3146151844835141 0.14702744968194853 0.19229811043946723 31.089680601429013 0.03843127257606098 0.1063315906331233 2.791158339002244e-05 4.554215525817206 0.26243386511657496 HEKEDGAISTIVLR ddPTM_KYSE-520_SHP099_60min_R1 2 HEKEDGAISTIVLR 14 1 P50990-2;P50990;P50990-3 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ; 204.28 1.8427e-11 1707550000.0 3456900.0 3293900.0 2169400.0 2635600.0 3262200.0 2737100.0 2325300.0 2669600.0 2665100.0 2108500.0 False True 3265138.865840696 3135656.099755299 2309242.9951627254 2886086.6315779686 3518916.5806210125 2720016.7436243077 2560364.016741055 2660339.7806893243 2181185.0217037294 2089820.3303881786 1.562401713851738 1.5004429108854822 1.1049959470600947 1.381021415865873 1.6838368971017634 1.3015553079240414 1.225159875952338 1.2729992822852734 1.043718921663749 1.0 20.994947483113485 -7.416604794487835 0.9525211369901497 0.9990246269234914 1.4246339127590637 0.51395772610729 0.1499131382517206 0.49947817398781963 0.8278881371421409 0.14634841662035014 0.056649144034501 3.831732702138692e-08 7.416604794487835 0.42560928583557234 HELIEFR ddPTM_KYSE-520_SHP099_60min_R1 8 HELIEFR 7 0 A0A087WVQ6;Q00610-2;Q00610;J3KS13;K7EJJ5;J3KRF5 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ;;;;;;; 178.6 0.00051256 7394240000.0 9370723.0 7467237.0 4718436.0 4600316.0 7525694.0 7408043.0 5543328.0 5582581.0 5365677.0 6319953.0 False True 8850910.315116813 7108499.725968752 5022593.93432453 5037528.649504567 8117923.3024585 7361806.655762968 6103701.691907779 5563216.329495195 4391405.314509858 6263963.133269033 1.4129888900699366 1.134824642918831 0.8018236741606335 0.8042079019829071 1.295972394751615 1.175263407388701 0.9744153281314705 0.8881304393296879 0.7010586143437396 1.0 22.57864429095593 -7.116111302345748 2.9901505762170477 0.8433935037285945 1.086183908342803 0.2360320943720654 0.19221963104319773 0.4431625941878099 7.526308799964642 0.11219193156294821 0.059154948157308346 7.654004225629846e-08 7.116111302345748 0.24279040461420864 HELLQPFNVLYEK ddPTM_KYSE-520_SHP099_60min_R1 3 HELLQPFNVLYEK 13 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ;; 155.98 8.7139e-06 714594000.0 1563060.0 1518540.0 1053850.0 985780.0 1754640.0 1328440.0 1023600.0 1086240.0 1153200.0 974480.0 False True 1476353.9459171388 1445587.0590249887 1121782.8572196192 1079468.2348144364 1892720.185464063 1320148.7132002036 1127075.4773733062 1082472.0869703228 943807.94980629 965846.8653339675 1.5285590282540802 1.4967041990917869 1.1614500160247792 1.1176391139822992 1.9596483183797508 1.366830250822139 1.166929787553423 1.1207491848058428 0.977181770404093 1.0 19.881434942859904 -6.869274945389244 2.776504984536427 1.0475081565971112 1.4397732823408467 0.4223546756213711 0.218427290064884 0.30317960674792555 4.709454898639863 0.11096013308955714 0.06979647477622739 1.351216857022512e-07 6.869274945389244 0.3922651257437355 HELQANCY(ph)EEVKDR ddPTM_KYSE-520_SHP099_60min_R1 1 HELQANCYEEVKDR 14 1 E9PP50;P23528;G3V1A4;E9PK25 E9PP50 CFL1 Cofilin-1 1 HELQANCY(1)EEVKDR 115.12 0.00071917 431440000.0 360130.0 363950.0 329090.0 326910.0 338490.0 314540.0 291690.0 299590.0 428070.0 332670.0 True False 340152.8709986433 346465.2956999128 350303.6679626171 357979.42811092484 365127.23725535156 312576.8391873109 321176.8718200659 298550.79221483174 350343.2787665443 329722.8026133437 1.0316328391686354 1.0507774802163214 1.0624186898393193 1.0856981236166334 1.1073763608746394 0.9479988545222352 0.9740814686592988 0.9054599495350448 1.0625388234898077 1.0 18.330894137240165 -6.26739777091887 24.88500089410659 0.9718611668644421 1.0673669325280077 0.5314897979175324 0.041846270771332836 346.33297025927027 1446441.2002623482 0.014271881702181178 0.012922712737004283 5.402592720540175e-07 6.26739777091887 0.09550576566356561 HELQANCYEEVK ddPTM_KYSE-520_SHP099_60min_R1 3 HELQANCYEEVK 12 0 E9PP50;P23528;G3V1A4;E9PK25 E9PP50 CFL1 Cofilin-1 0 ;; 182.89 2.7735e-07 7039000000.0 10396900.0 8919100.0 5414300.0 6351800.0 10000100.0 10129200.0 7932600.0 9520800.0 7256900.0 8497300.0 False True 9820163.23129368 8490613.04815795 5763314.441186295 6955473.162261692 10787050.977214228 10065979.90556404 8734504.622715393 9487774.56697142 5939229.891561977 8422020.532799363 1.1660103645021147 1.0081444250927025 0.684314935916055 0.8258675142353029 1.2808150888737815 1.1951977398252966 1.037103221097487 1.1265437468386004 0.7052024948682782 1.0 23.005734962111127 -4.272985005289295 6.114368648290618 0.9914946646354825 1.1695516471015854 0.07733058044304442 0.18694481840057803 0.37367491264866076 68.41924909419093 0.050028097469272045 0.2675806403276528 5.3335331004470114e-05 4.272985005289295 0.1780569824661029 HELQANCYEEVKDR ddPTM_KYSE-520_SHP099_60min_R1 16 HELQANCYEEVKDR 14 1 E9PP50;P23528;G3V1A4;E9PK25 E9PP50 CFL1 Cofilin-1 0 ;;;;;;;;;;;;;;; 266.15 8.82e-25 175497085000.0 88273296.0 81438213.0 55435122.0 52355214.0 80771082.0 74756436.0 61903635.0 74014988.0 68240845.0 66639376.0 False True 83376600.30242704 77525799.00623007 59008558.66345124 57331037.79739086 87127306.6288086 74289853.35343215 68161458.54705735 73758247.28185606 55850027.759711035 66049002.973289944 1.262344570684047 1.1737618361564264 0.8934057443276495 0.8680076188368111 1.3191312920203 1.1247687324436189 1.0319831561215491 1.1167200708795515 0.8455847211243545 1.0 25.977033447994817 -4.536697212609841 22.56262009510326 1.0375526407656261 1.2401990167592047 0.25411609730140594 0.13470999792752514 89.35145752365672 145892.231216462 0.035704380738996656 0.09463222988556974 2.906048026810022e-05 4.536697212609841 0.2026463759935786 HELQVEMK ddPTM_KYSE-520_SHP099_60min_R1 1 HELQVEMK 8 0 A0A2R8Y5N1;A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610;H9KV28 A0A2R8Y5N1 DIAPH1 Protein diaphanous homolog 1 0 63.076 0.029529000000000003 0.0 440490.0 374380.0 289110.0 343220.0 422350.0 431430.0 530980.0 367760.0 407150.0 442500.0 False True 416055.1416049546 356394.22284416377 307746.4931923552 375839.525607144 455586.54215722065 428737.28533916746 584656.6402654145 366484.3263958292 333221.82341626036 438579.79425979074 0.9486418367885554 0.8126097633970234 0.7016887171278643 0.8569467415649276 1.038776861405877 0.9775582253230911 1.3330678884834712 0.8356160753241265 0.7597746813180316 1.0 18.74247982180471 -5.653771594816615 5.184864399867086 0.9985687851854977 0.8143090676599521 0.21380967731048028 0.15120555191031226 0.32811430724226875 13.697585914041731 0.047831657320066286 0.06195449168836237 2.2193633257434596e-06 5.653771594816615 -0.1842597175255456 HELS(ph)PPQK ddPTM_KYSE-520_SHP099_60min_R1 4 HELSPPQK 8 0 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 1 HELS(1)PPQK;HELS(1)PPQK;HELS(1)PPQK;HELS(1)PPQK 123.79 0.00089802 11675320000.0 11801760.0 8848210.0 6013860.0 4240420.0 8993010.0 9419060.0 7212730.0 8979600.0 8037080.0 8232120.0 True False 11147092.846574705 8423128.710166022 6401523.0381162185 4643428.241871234 9700708.723772477 9360272.152717087 7941863.137861237 8948451.863454401 6577748.870299294 8159189.8212924525 1.3662009452807355 1.0323486638568926 0.7845782704320253 0.56910408307374 1.188930388462986 1.1472060777762831 0.9733641834310468 1.0967328937613718 0.8061767178321816 1.0 22.959994474114993 -4.297499962336103 3.812535058764472 0.9506281450705929 1.3939635789142468 0.3331286284334929 0.1774346510914961 0.2830886194172706 7.832776156855797 0.048037397593479386 0.32770995453732066 5.040806628187237e-05 4.297499962336103 0.4433354338436539 HELS(ph)PPQKR ddPTM_KYSE-520_SHP099_60min_R1 14 HELSPPQKR 9 1 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 1 HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR;HELS(1)PPQKR 140.39 0.00025045 249517010000.0 28832210.0 25488970.0 22814720.0 25894540.0 26634510.0 25481620.0 25786340.0 27727070.0 29187800.0 25007490.0 True False 27232829.835714344 24264441.621476043 24285393.356042683 28355549.29612264 28730494.407368124 25322579.757653 28393074.897626404 27630891.265716765 23888031.284561258 24785943.09413279 1.098720743942996 0.9789597889950699 0.9798050961309359 1.1440173645373548 1.1591446933552054 1.0216508470741725 1.145531351774445 1.114780711017505 0.9637733449898834 1.0 24.56301881797007 -5.250525343979713 24.7958724513638 1.086991773772705 1.0151416692846569 0.12152903189214936 0.0701570550815297 1155.6482907588165 2625538.4529764783 0.01888597506336501 0.03224789517204727 5.616615007044685e-06 5.250525343979713 -0.07185010448804818 HELWQEELS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 HELWQEELSK 10 0 Q92845-2;Q92845-3;Q92845;Q92845-4 Q92845-2 KIFAP3 Kinesin-associated protein 3 1 HELWQEELS(1)K 45.137 0.052877 827830000.0 658170.0 609190.0 372470.0 194320.0 614700.0 671260.0 502890.0 605840.0 472610.0 325120.0 True False 621659.9980706334 579923.5979871672 396480.0121730713 212788.11437556145 663073.3928354303 667070.4173487454 553727.0289334327 603738.4824441194 386795.9375285731 322239.68973953265 1.9291850689563508 1.7996653312815725 1.2303885114013962 0.6603411098972902 2.057702430670147 2.070106317095639 1.7183700411982519 1.8735695870739049 1.200336115769046 1.0 18.297774673831793 HEMLPEFYK ddPTM_KYSE-520_SHP099_60min_R1 1 HEMLPEFYK 9 0 Q86VP6-2;Q86VP6;A0A0C4DGH5;H0YH27;Q86VP6-3 Q86VP6-2 CAND1 Cullin-associated NEDD8-dissociated protein 1 0 101.11 0.0039594999999999995 289530000.0 600260.0 512350.0 340900.0 358790.0 597950.0 515640.0 414370.0 403190.0 385400.0 431330.0 False True 566962.3812113568 487735.9369469709 362874.9594592852 392889.2937258532 645005.2631298931 512421.6994930539 456258.5634614854 401791.4279952537 315421.0751433784 427508.7517696623 1.326200642359787 1.1408794204282358 0.84881293764671 0.9190204694044212 1.5087533540773357 1.198622712100972 1.067249644768239 0.9398437490040792 0.737811971889933 1.0 18.705594428951024 -7.245706413990721 2.7908276551422926 0.864952073837531 1.1457728413390387 0.28834761394223385 0.1855161335411382 0.3943526162763866 6.073425223001644 0.12290603528517313 0.0564214059975145 5.6792839911217116e-08 7.245706413990721 0.28082076750150764 HEMT(ph)LKFPS(ph)IK ddPTM_KYSE-520_SHP099_60min_R1 1 HEMTLKFPSIK 11 1 H9KVC5;Q02930-3;Q02930-2;Q02930 H9KVC5 CREB5 Cyclic AMP-responsive element-binding protein 5 2 HEMT(1)LKFPS(1)IK 64.827 0.020997 0.0 404620.0 508500.0 367020.0 312220.0 300600.0 506840.0 355240.0 449530.0 521010.0 451260.0 True False 382174.92201002676 484070.89672593964 390678.6964527631 341893.2949276342 324255.50981996115 503676.62355724775 391151.12600829755 447970.6853510909 426407.7175932845 447262.18747496774 0.8544762618266635 1.0822978339813982 0.8734892136944362 0.764413591181949 0.7249785895171588 1.1261328090370648 0.8745454835262357 1.0015840772950717 0.9533730539587579 1.0 18.77076126933588 -6.2616067534374285 24.99999999730514 0.9839397332821677 0.8677315114195225 0.2767420093322619 0.10535184753315657 25.83219415509193 3858205.2778736595 0.03829157853557025 0.03593286342561505 5.4751150123424e-07 6.2616067534374285 -0.11620822186264512 HEPLVLFCESCDTLTCR ddPTM_KYSE-520_SHP099_60min_R1 1 HEPLVLFCESCDTLTCR 17 0 Q13263-2;Q13263;M0R2I3;M0R3C0 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 0 243.69 3.764e-23 577890000.0 279580.0 213680.0 200260.0 262100.0 256910.0 234680.0 197490.0 253330.0 178430.0 176870.0 False True 264071.1400710871 203414.49205978084 213169.0800273291 287009.9051967616 277127.3553820567 233215.27506987393 217454.21651666102 252451.25735766644 146031.60985426305 175303.06940277785 1.50636917522736 1.1603589871687525 1.2160031239244875 1.6372212202247591 1.5808471370534103 1.3303547728193879 1.2404472851358714 1.4400846386644393 0.8330236906390929 1.0 17.419491731078466 -7.759446559802492 24.99944234379326 0.9165117088385052 1.383343080729049 0.6012240061019858 0.15385356890337115 35.9143471007835 450585.83747474215 0.12455261595395849 0.04170679886253339 1.7400167949800097e-08 7.759446559802492 0.4668313718905438 HEQEYMEVR ddPTM_KYSE-520_SHP099_60min_R1 2 HEQEYMEVR 9 0 F5GX39;E7EQ72;Q15363 F5GX39 TMED2 Transmembrane emp24 domain-containing protein 2 0 ; 147.74 0.00052533 564320000.0 170200.0 178326.0 81275.0 125340.0 205410.0 171522.0 173528.0 150879.0 154418.0 113844.0 False True 160758.66671471178 169758.95128721712 86514.11654459796 137252.27591515495 221574.5983769736 170451.46757514475 191069.90371007705 150355.63596442319 126379.58376100204 112835.43072929185 1.4247179779939383 1.5044826805730271 0.7667282872536513 1.2163934238390295 1.9636970138268215 1.5106200815954867 1.6933502400365783 1.3325214872015476 1.1200345755244603 1.0 16.783860624720877 -7.777925481689148 3.010804724248385 1.0166701706732473 1.4348314910572162 0.2106707631299809 0.292431091977249 0.4332547953469924 7.420992088436001 0.29530799467805 0.08309138398751036 1.6675333112944785e-08 7.777925481689148 0.4181613203839689 HEQNIDCGGGYVK ddPTM_KYSE-520_SHP099_60min_R1 3 HEQNIDCGGGYVK 13 0 P27797 P27797 CALR Calreticulin 0 ;; 201.0 7.1076e-08 1942780000.0 1679600.0 1508420.0 1048720.0 1063070.0 1560200.0 1521330.0 1174030.0 1321860.0 1350770.0 1290100.0 False True 1586429.2398004099 1435953.239015421 1116322.169211327 1164103.8531763507 1682978.8636763238 1511834.8151612913 1292712.4098286272 1317274.7761844443 1105504.2181406897 1278670.7176826114 1.240686298561339 1.1230047104057088 0.8730333414019871 0.9104015889924382 1.3161941072103824 1.1823488207356878 1.010981476272065 1.0301907738778884 0.8645730310804656 1.0 20.286213359635305 -7.301189136246175 2.200862052104432 0.9419457602774645 1.0954757896822747 0.18733975339188436 0.1335296828030839 0.6420902609501828 5.857399836676414 0.10392763813325183 0.04186762813829416 4.998168161983783e-08 7.301189136246175 0.1535300294048102 HERPAGPGT(ph)PPPDSGPLAK ddPTM_KYSE-520_SHP099_60min_R1 6 HERPAGPGTPPPDSGPLAK 19 1 H0YME5;Q9P2K8-2;Q9P2K8 H0YME5 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 1 HERPAGPGT(1)PPPDSGPLAK;HERPAGPGT(1)PPPDSGPLAK;HERPAGPGT(1)PPPDSGPLAK;HERPAGPGT(1)PPPDSGPLAK;HERPAGPGT(1)PPPDSGPLAK;HERPAGPGT(1)PPPDSGPLAK 162.65 2.2216999999999996e-08 12584700000.0 6671270.0 6284060.0 5999480.0 6053450.0 6149770.0 5768910.0 6044670.0 5991610.0 6895130.0 5664370.0 True False 6301201.354252961 5982164.325033636 6386216.080307404 6628768.067963893 6633721.9115951555 5732904.092821492 6655724.233894192 5970826.503362286 5643148.204082415 5614188.088613181 1.1223709029330875 1.0655439808236549 1.1375137383195384 1.180717133686437 1.1815995130355206 1.021145711959507 1.185518569887866 1.0635244863763018 1.0051583799851616 1.0 22.420645967689026 -7.549886090896095 3.8588273995760884 1.0054937057927387 1.1260356526869832 0.5068338277524405 0.049651816837263836 0.18970223017975177 6.140036944820206 0.03679442119967292 0.013213335330899653 2.8191222489237984e-08 7.549886090896095 0.12054194689424458 HES(ph)EEGDSHRR ddPTM_KYSE-520_SHP099_60min_R1 1 HESEEGDSHRR 11 1 Q6UN15;Q6UN15-3;Q6UN15-5;H0Y8P7 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 HES(1)EEGDSHRR 77.078 0.008808499999999999 22757000.0 5106.9 4984.4 2728.4 3264.2 6694.5 8286.8 3020.5 3508.8 5799.5 4504.6 True False 4823.610076647242 4744.941942263068 2904.277029594351 3574.428586582483 7221.319063505421 8235.079007367616 3325.8416172392235 3496.6287917600766 4746.456993497726 4464.692748525768 1.08039015187327 1.062770096291584 0.6504987449703761 0.8005990082436807 1.617428000143993 1.844489525082509 0.7449206036266234 0.7831734429910447 1.0631094368285467 1.0 12.124345179957 -4.243458907215526 15.500748843821427 1.0669398907943075 1.0803925119271955 9.875604430253926e-05 0.36615763244172433 1240.8205725807522 1065839.5995175603 0.10065533149020742 1.5054116561640205 5.708750896079054e-05 4.243458907215526 0.013452621132888032 HEWQVNGLDDIKDR ddPTM_KYSE-520_SHP099_60min_R1 4 HEWQVNGLDDIKDR 14 1 Q9Y281-3;Q9Y281 Q9Y281-3 CFL2 Cofilin-2 0 ;;; 216.68 7.2819e-14 4375960000.0 4876200.0 4491240.0 3132370.0 3167730.0 4707010.0 4648530.0 3520430.0 3978100.0 3722470.0 3832880.0 False True 4605707.465536297 4275474.088911317 3334287.5821692077 3468790.1067872453 5077424.907776637 4619516.79998535 3876309.4204858374 3964300.899595519 3046563.283832313 3798923.6651355186 1.212371679853693 1.1254435376391798 0.8776927035332425 0.9130981331954464 1.3365430199017991 1.2160067448527052 1.0203704423072577 1.0435326553091193 0.8019543303257275 1.0 21.857159292372945 -7.589546923903218 5.355066146684112 0.9015382939960611 1.0948530466509148 0.24091396961845324 0.13909524747798344 0.32143618125626006 17.366938528817105 0.10656128964973542 0.038565943803832735 2.573078737820599e-08 7.589546923903218 0.19331475265485365 HFAAASGKVS(ph)PTASR ddPTM_KYSE-520_SHP099_60min_R1 3 HFAAASGKVSPTASR 15 1 A0A087WU80;P21580 A0A087WU80 TNFAIP3 Tumor necrosis factor alpha-induced protein 3;A20p50;A20p37 1 HFAAAS(0.016)GKVS(0.981)PT(0.003)ASR;HFAAAS(0.062)GKVS(0.929)PT(0.009)ASR;HFAAAS(0.034)GKVS(0.965)PT(0.001)ASR 133.93 1.0933e-05 2098890000.0 1227530.0 1565180.0 1493620.0 1803680.0 1360060.0 1216360.0 1148360.0 1053280.0 1838400.0 1208140.0 True False 1159436.4638796123 1489986.4034169214 1589901.1350764958 1975101.2049038329 1467088.9843171532 1208768.2460541674 1264447.4357135673 1049626.4175173994 1504592.9022926502 1197436.8195186984 0.9682652520620169 1.2443131688699962 1.327753672812187 1.649440849578779 1.2251911419483825 1.0094630684064179 1.0559617134721173 0.8765610013055133 1.2565113062895554 1.0 20.191518106227846 -6.14908756509873 4.6796234585397585 1.0338267390086469 1.3102324596239854 0.3214854959683514 0.17753672677717214 0.27526183519783587 9.5069718489916 0.062066424718788885 0.06217685322188572 7.094347129940636e-07 6.14908756509873 0.2764057206153385 HFAESETLDQLPLTNPEHFGT(ph)PVIGK ddPTM_KYSE-520_SHP099_60min_R1 1 HFAESETLDQLPLTNPEHFGTPVIGK 26 0 Q4LE39-2;Q4LE39;Q4LE39-3;X6RCR8 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 HFAESETLDQLPLTNPEHFGT(1)PVIGK 159.1 9.7648e-10 469450000.0 404830.0 465560.0 330090.0 408950.0 375450.0 382930.0 270070.0 356810.0 406850.0 409290.0 True False 382373.2728914027 443193.7987801936 351368.12956267345 447816.48504469905 404995.7789817176 380539.99182932894 297371.31122919923 355572.30939007975 332976.2958538758 405664.00902280153 0.9425861412070952 1.0925144674475733 0.8661555418955685 1.10390982459459 0.9983527499945247 0.9380669306749853 0.733048297643 0.876519241247487 0.8208179391018144 1.0 18.629925785096276 -6.529843345182245 24.49419064057468 0.8456278841389758 1.00047779509002 0.3636351493641017 0.08868037193382688 131.07752623055666 460986.71940667357 0.03176702199685663 0.024667697746699378 2.9522739524573564e-07 6.529843345182245 0.15484991095104428 HFAHS(ph)PADRDEVVQAPSARPEESELLLPTEPDSGFPR ddPTM_KYSE-520_SHP099_60min_R1 2 HFAHSPADRDEVVQAPSARPEESELLLPTEPDSGFPR 37 2 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 HFAHS(0.896)PADRDEVVQAPS(0.049)ARPEES(0.055)ELLLPTEPDSGFPR;HFAHS(0.964)PADRDEVVQAPS(0.027)ARPEES(0.008)ELLLPTEPDSGFPR 73.92399999999999 0.006288800000000001 1600520000.0 378160.0 414600.0 408400.0 481710.0 335010.0 349530.0 366700.0 356590.0 420590.0 277600.0 True False 357182.71095672983 394681.99367271276 434726.1174631041 527491.5735686079 361373.3810538427 347348.45361842983 403769.6146471195 355353.0725187319 344221.45821108896 275140.67996953195 1.2981821190391871 1.4344734254361018 1.5800139678045573 1.9171704221528432 1.3134131277638037 1.2624394679001807 1.467502423457816 1.2915322901654613 1.2510743894694407 1.0 18.06980993452525 -5.961796209636998 24.99999939393351 1.2862512751523076 1.558412107862085 0.38291299303765625 0.18135012776654894 193.84435009553854 126848.07555343107 0.05793535559966804 0.0656924088649065 1.0919526091707689e-06 5.961796209636998 0.2721608327097773 HFAS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 2 HFASPSK 7 0 A0A1X7SBT5;Q92664 A0A1X7SBT5 GTF3A Transcription factor IIIA 1 HFAS(1)PSK;HFAS(0.995)PS(0.005)K 143.37 0.0015657 1206040000.0 2630900.0 2649700.0 2501320.0 2871800.0 2483700.0 2395600.0 2439610.0 2332460.0 3075300.0 2573500.0 True False 2484958.7324308767 2522404.434719215 2662559.089453502 3144735.0085618426 2679153.0596800977 2380648.1717973 2686229.587099148 2324369.2406602562 2516903.0420042374 2550700.7921527047 0.974225883363472 0.9889064379794981 1.0438539469799564 1.232890591572598 1.05035959839844 0.9333310198990898 1.0531339447431078 0.9112669144931608 0.9867496218088586 1.0 21.282462244040886 -6.145333541825699 6.864002030876675 0.9764198842838538 1.064121086754337 0.22876284955478532 0.07438789500706339 0.4048815202861243 21.544624765364947 0.0263583134525989 0.026395556530820426 7.155936171825225e-07 6.145333541825699 0.08770120247048308 HFDETVNR ddPTM_KYSE-520_SHP099_60min_R1 1 HFDETVNR 8 0 B7Z4L4;P04843 B7Z4L4 RPN1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 0 114.89 0.0017347 23722000.0 13246.0 17182.0 9415.0 11431.0 15602.0 14776.0 12265.0 13344.0 15344.0 10548.0 False True 12511.217974753641 16356.550929292198 10021.905964532622 12517.39880314453 16829.788636763253 14683.777503121106 13504.865894864784 13297.712778513005 12557.916390762848 10454.552926219825 1.1967243423079086 1.5645385359588424 0.9586164071538503 1.197315551557554 1.609804719105152 1.4045342356337844 1.291768858044119 1.271954226293368 1.2011911441251424 1.0 13.351843748036824 -9.580559047818118 7.0623928749053455 1.0000471718751611 1.3055258266647516 0.19818486995105422 0.18043594423842926 0.0 0.0 0.17774971738442313 0.04311063880586261 2.6268843440946564e-10 9.580559047818118 0.30547865478959046 HFDKS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 6 HFDKSPTK 8 1 H3BPM0;H3BS25;Q9BY12-2;Q9BY12;H3BPB0 H3BPM0 SCAPER S phase cyclin A-associated protein in the endoplasmic reticulum 1 HFDKS(0.991)PT(0.009)K;HFDKS(0.978)PT(0.022)K;HFDKS(0.996)PT(0.004)K;HFDKS(0.94)PT(0.06)K;HFDKS(1)PTK;HFDKS(0.998)PT(0.002)K 135.8 0.00045521 7050160000.0 6774090.0 5758480.0 5511220.0 6163860.0 6331420.0 5902410.0 5986080.0 6570380.0 7234980.0 6029550.0 True False 6398317.723886376 5481833.977145306 5866482.059463784 6749671.40116791 6829666.733148031 5865570.869802182 6591211.384910901 6547588.885318221 5921290.0110037355 5976132.877918917 1.0706451570927047 0.917287832973061 0.9816518774439773 1.1294379725235233 1.1428237746156578 0.9814994059912475 1.102922495124669 1.095623042370889 0.9908230174871414 1.0 22.51078079579527 -5.229720169257922 23.298633103275566 1.0688440733474003 0.9826041702318576 0.20884401608256442 0.06441839780318373 392.3288360452085 288174.44122452376 0.017181519199798073 0.029753271370672234 5.892231896598339e-06 5.229720169257922 -0.08623990311554264 HFDTYHR ddPTM_KYSE-520_SHP099_60min_R1 4 HFDTYHR 7 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 0 ;;; 157.52 0.0014395 751600000.0 462840.0 486830.0 393197.0 370116.0 542060.0 513320.0 410524.0 459710.0 478710.0 379537.0 False True 437165.34255133435 463441.956053272 418543.1077574437 405291.71336056734 584717.0381004934 510116.17947361444 452023.7722481431 458115.37330712046 391788.33129706007 376174.5974553176 1.1621341406586108 1.2319863148343506 1.112629907996801 1.0774031954901162 1.5543767230852068 1.3560622724776266 1.2016328994725247 1.2178264465652437 1.0415066140759202 1.0 18.521042903407942 -7.779620713834469 2.788001858881352 0.9975056578677624 1.2458411727959644 0.32310068085244203 0.12753829154364477 0.333821283167797 4.888538512808093 0.12890100560770237 0.03630590346935219 1.6610369219459715e-08 7.779620713834469 0.24833551492820205 HFDWLYAR ddPTM_KYSE-520_SHP099_60min_R1 2 HFDWLYAR 8 0 Q96RF0-3;Q96RF0-2;Q96RF0 Q96RF0-3 SNX18 Sorting nexin-18 0 ; 150.05 0.00071035 430070000.0 239390.0 252750.0 201358.0 179818.0 380800.0 290980.0 232580.0 178025.0 180975.0 183980.0 False True 226110.5594878663 240607.51061451517 214337.85886419142 196907.84865574702 410766.7935443819 289163.88588644966 256091.456162059 177407.47282634737 148114.50200849248 182350.08033427387 1.2399805860977586 1.3194812427471765 1.175419602071353 1.0798341755308618 2.2526274339522496 1.585762316947548 1.4043945343627302 0.9728949529450933 0.812253560497354 1.0 17.47635130968985 -7.275565894798265 4.051365154898189 0.9044981352100365 1.4488143968611777 0.363935194717635 0.30893105273003574 0.25876259055479517 10.103650405366439 0.18911644442083933 0.09145864173931176 5.301931411794851e-08 7.275565894798265 0.5443162616511412 HFEALANR ddPTM_KYSE-520_SHP099_60min_R1 1 HFEALANR 8 0 F5H365;Q15436-2;Q15436 F5H365 SEC23A Protein transport protein Sec23A 0 127.56 0.0007019999999999999 0.0 92701.0 93452.0 66219.0 59760.0 93864.0 95657.0 68417.0 84348.0 80586.0 92139.0 False True 87558.69073513793 88962.42564568814 70487.58269414608 65439.572432500834 101250.56278689558 95059.9691808374 75333.25804557388 84055.41647497119 65953.61380774346 91322.72014305736 0.9587832096763755 0.9741543561813335 0.7718515456364751 0.7165749369925635 1.1087116396476826 1.0409235405157187 0.8249125510887549 0.9204217345179609 0.7222037813199923 1.0 16.47868621193788 -11.595793630362843 2.2905217856988394 3.4025707317690976 0.8962694808445358 0.05992498856268158 0.12640192071054734 15061707.198294325 1679970.5585516999 194363607.74204788 0.033681851076074555 2.5363335684349126e-12 11.595793630362843 -2.5063012509245617 HFEELETIMDR ddPTM_KYSE-520_SHP099_60min_R1 3 HFEELETIMDR 11 0 Q92922;F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 Q92922;F8VXC8 SMARCC1;SMARCC2 SWI/SNF complex subunit SMARCC1;SWI/SNF complex subunit SMARCC2 0 ;; 199.82 6.263499999999999e-07 867710000.0 461040.0 387058.0 282181.0 235748.0 387255.0 373027.0 317429.0 349530.0 312459.0 338946.0 False True 435465.19213954586 368463.15269409696 300370.83876556373 258153.41903977926 417729.76532045624 370698.8001256597 349517.82112849836 348317.5620109154 255724.3220504017 335943.2021359981 1.2962464766983401 1.0968019306577126 0.8941119714753633 0.7684436458257976 1.2434535441242502 1.1034567681937844 1.0404074822951914 1.0368346785892333 0.7612129682174018 1.0 18.357857811835792 -4.381845878397964 3.303137521554253 0.9906918180843429 1.3041460016730653 0.32197999555028944 0.13928657586734375 0.34646114019084584 6.1208156677957914 0.0372793042427669 0.22610292292661355 4.151013268704222e-05 4.381845878397964 0.31345418358872235 HFELGGDK ddPTM_KYSE-520_SHP099_60min_R1 4 HFELGGDK 8 0 R4GN19;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881 R4GN19 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a 0 ;;; 151.44 0.00066131 4913650000.0 3603940.0 3353240.0 2142020.0 1968880.0 3180730.0 3451100.0 2416540.0 3069300.0 2924100.0 3038820.0 False True 3404022.263923727 3192145.317084144 2280098.03655318 2156001.763234644 3431035.3551219087 3429560.4047794575 2660827.446357647 3058653.3146800045 2393157.1505624135 3011898.4189661853 1.1301915902901318 1.0598449459593087 0.757030191388662 0.7158281798808732 1.139160382540255 1.138670674675885 0.8834386410916736 1.0155233972764153 0.7945676837879045 1.0 21.522241682984404 -9.155734354792973 0.004252396356652755 3.462891307140129e-07 1.8962825257197242 0.004561088851605666 0.15506954857827135 300656.3348533844 356.46430640566814 80821.84054896673 78136.79622370719 6.986596230214897e-10 9.155734354792973 1.8962821794305935 HFELGGDKK ddPTM_KYSE-520_SHP099_60min_R1 2 HFELGGDKK 9 1 R4GN19;H0Y5B4;H7BZ11;J3KQN4;Q969Q0;P83881 R4GN19 RPL36A;RPL36A-HNRNPH2;RPL36AL 60S ribosomal protein L36a-like;60S ribosomal protein L36a 0 ; 151.83 0.00050564 6135800000.0 24911000.0 22595000.0 17123600.0 14655800.0 22774000.0 23561000.0 18719000.0 22581000.0 19845100.0 17470400.0 False True 23529137.17115268 21509502.28421358 18227414.654728703 16048682.825573074 24566184.2336653 23413947.059490807 20611299.19983481 22502671.78144501 16241730.094260165 17315625.847765516 1.3588383912897368 1.2422018397324783 1.05265699403414 0.9268323863468132 1.4187292131191103 1.3521860119489846 1.190329438915116 1.2995586748802876 0.9379811181561231 1.0 24.04557119677413 -7.767644045811535 24.999491483704986 0.9689904062859231 1.2235644953624267 0.3530677641527563 0.14118830218269804 195.71538431930378 788527.6535347544 0.13398779385149362 0.038035767160718714 1.7074812925958106e-08 7.767644045811535 0.2545740890765036 HFFHHADEDDEEEDDS(ph)PPER ddPTM_KYSE-520_SHP099_60min_R1 3 HFFHHADEDDEEEDDSPPER 20 0 A0A087WZV0;O43314-2;O43314;D6RFG4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 HFFHHADEDDEEEDDS(1)PPER;HFFHHADEDDEEEDDS(1)PPER;HFFHHADEDDEEEDDS(1)PPER 207.22 2.7708e-14 4927160000.0 783540.0 803630.0 714000.0 733310.0 628138.0 674520.0 711632.0 704230.0 918850.0 593694.0 True False 740075.4742517347 765022.4085267772 760025.5824403927 803003.5619223086 677568.8869836681 670310.0704795102 783570.7074190306 701787.1904985181 752010.0023235427 588434.3330469421 1.2577027421557596 1.3000981852392148 1.2916064542069505 1.3646443057873874 1.1514774868338882 1.1391416727990895 1.3316196275660237 1.1926346766080578 1.2779845771907932 1.0 19.166521899601143 -13.49707089108364 0.22084373409767014 1.912494399934166e-11 1.2886042652989185 0.5489040048672311 0.07010393082138598 95.98876123517029 1.176863831935721 42.823654861990235 0.1400320757800042 3.1836777988194746e-14 13.49707089108364 1.2886042652797935 HFFHHADEDDEEEDDSPPER ddPTM_KYSE-520_SHP099_60min_R1 1 HFFHHADEDDEEEDDSPPER 20 0 A0A087WZV0;O43314-2;O43314;D6RFG4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 0 110.37 5.7453e-05 99870000.0 42076.0 48993.0 42883.0 42046.0 43660.0 51667.0 37071.0 28235.0 48642.0 25057.0 False True 39741.9604035735 46639.302740007755 45647.30679522595 46042.03919840915 47095.79360858119 51344.52708809947 40818.49845809479 28137.059375098543 39809.838965034294 24835.014474051022 1.6002390675108351 1.8779655952582208 1.838022153879586 1.8539163424493423 1.8963465335520318 2.0674248908430086 1.643586658696905 1.1329592501142964 1.602972247373956 1.0 14.6000879671394 -7.063018632824591 4.601770259204894 1.283199032638233 1.858582268897686 0.6975264758289768 0.17892185779671138 0.12218246939127474 5.13343532872965 0.08255783007682148 0.04748378279738999 8.649308092786827e-08 7.063018632824591 0.5753832362594531 HFFPKWLQVLCS(ph)WLS(ph)NS(ph)PNY(ph)EEITK ddPTM_KYSE-520_SHP099_60min_R1 13 HFFPKWLQVLCSWLSNSPNYEEITK 25 1 Q9UBB9 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 4 HFFPKWLQVLCS(1)WLS(1)NS(1)PNY(1)EEIT(0.001)K;HFFPKWLQVLCS(1)WLS(0.999)NS(0.999)PNY(0.999)EEIT(0.002)K;HFFPKWLQVLCS(1)WLS(1)NS(1)PNY(1)EEIT(0.001)K;HFFPKWLQVLCS(1)WLS(0.999)NS(0.999)PNY(0.999)EEIT(0.002)K;HFFPKWLQVLCS(1)WLS(1)NS(1)PNY(1)EEITK;HFFPKWLQVLCS(1)WLS(0.998)NS(0.998)PNY(0.998)EEIT(0.005)K;HFFPKWLQVLCS(1)WLS(1)NS(1)PNY(1)EEITK;HFFPKWLQVLCS(1)WLS(1)NS(1)PNY(1)EEITK;HFFPKWLQVLCS(1)WLS(1)NS(1)PNY(1)EEIT(0.001)K;HFFPKWLQVLCS(1)WLS(0.998)NS(0.998)PNY(0.998)EEIT(0.005)K;HFFPKWLQVLCS(1)WLS(1)NS(1)PNY(1)EEIT(0.001)K;HFFPKWLQVLCS(1)WLS(0.999)NS(0.999)PNY(0.999)EEIT(0.004)K;HFFPKWLQVLCS(1)WLS(1)NS(1)PNY(1)EEIT(0.001)K 54.732 0.035429 200710800000.0 17199620.0 16412730.0 13477220.0 9703514.0 15941460.0 15080040.0 15141770.0 17815940.0 18636380.0 17341350.0 True False 16245522.792007567 15624237.814790009 14345983.165514447 10625733.053092131 17195962.207500074 14985919.876703193 16672447.8810344 17754140.66241165 15252483.176908543 17187719.130366135 0.9451820028467909 0.9090349741162648 0.8346647426981108 0.6182165866510632 1.0004795911005653 0.8718969493879529 0.9700209640718769 1.032955014434975 0.8874058891247214 1.0 24.0348747711196 HFGAEYR ddPTM_KYSE-520_SHP099_60min_R1 1 HFGAEYR 7 0 P04818-2;P04818 P04818-2 TYMS Thymidylate synthase 0 63.48 0.062967 0.0 96183.0 151050.0 72286.0 55547.0 153650.0 316500.0 120400.0 82986.0 87427.0 492680.0 False True 90847.53725394313 143793.33126932778 76945.67122168936 60826.170179185516 165741.38085108795 314524.6061002862 132571.20699076378 82698.14093507793 71552.46065531964 488315.23849923926 0.18604280614536803 0.29446824496252494 0.15757376619695485 0.12456332586737466 0.3394147218515405 0.6441015583845561 0.2714869341333699 0.16935400416591087 0.14652923974935733 1.0 18.89745327425174 -11.084885796703446 2.6445810650993247 2.2329339843901272 0.2647519511195748 0.7006861476076578 0.1451969686273827 51387726.30646021 17785408.881485514 381534838.8247996 0.03994373751405977 8.224588976146366e-12 11.084885796703446 -1.9681820332705524 HFGAGGNQR ddPTM_KYSE-520_SHP099_60min_R1 2 HFGAGGNQR 9 0 Q96QK1 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 0 ; 117.04 0.0013896 1177530000.0 140557.0 133947.0 107647.0 116993.0 145820.0 144296.0 138060.0 132329.0 119968.0 147470.0 False True 132760.02301656717 127511.98506145416 114586.09786128966 128111.97954477184 157295.20439769363 143395.39514011657 152016.45213575463 131869.98158482075 98184.835347174 146163.530529924 0.9082978670208521 0.8723926180433134 0.7839581969992884 0.8764975714550322 1.0761590379447672 0.9810613811819446 1.0400436523708105 0.902208513346105 0.6717464677488251 1.0 17.15722386173938 -2.8029203393666866 12.161889265947252 0.9130393580465292 1.0148292442915454 0.0 0.11529905604431004 0.0 0.0 0.02772097130848082 0.0 0.0015742715993617424 2.8029203393666866 0.10178988624501617 HFHEGCFR ddPTM_KYSE-520_SHP099_60min_R1 1 HFHEGCFR 8 0 Q13643 Q13643 FHL3 Four and a half LIM domains protein 3 0 123.98 0.00085864 0.0 214080.0 175940.0 145330.0 131690.0 205790.0 175710.0 153070.0 143590.0 140760.0 127080.0 False True 202204.5556421002 167487.5783086758 154698.20433622153 144205.77800595784 221984.5022150691 174613.32871368487 168543.80941923792 143091.91980415786 115201.53227084075 125954.1700667439 1.6053819856456577 1.3297501640471536 1.2282102629412428 1.1449067381377076 1.76242280900615 1.3863243163855248 1.3381360008162135 1.1360633770865431 0.9146305533972773 1.0 16.942539361773118 -7.395615611271408 2.2300053503004635 0.9585065801396273 1.3993510733970163 0.5404288443550851 0.16730951469135114 0.2712760115517056 2.5032249990686317 0.13398650628833939 0.04945284040970057 4.0214658840019624e-08 7.395615611271408 0.44084449325738895 HFIDVGAGVIDEDYR ddPTM_KYSE-520_SHP099_60min_R1 8 HFIDVGAGVIDEDYR 15 0 P33316-2;A0A0C4DGL3;H0YNW5;P33316;H0YNJ9;H0YKC5;H0YMP1;H0YMM5;H0YKI0 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 0 ;;;;;;; 200.55 3.2430999999999994e-11 8676000000.0 8094010.0 7299180.0 4745550.0 4906900.0 7493160.0 7286520.0 5303580.0 5736200.0 5606590.0 5930570.0 False True 7645019.130291084 6948516.4365074495 5051455.746148462 5373250.300686717 8082829.061751627 7241042.125882638 5839717.624352788 5716302.461039146 4588574.586632373 5878029.7637136355 1.3006091220370235 1.1821165791643593 0.8593790690432029 0.9141243778411888 1.3750915505138646 1.2318825213480844 0.9934821460759935 0.9724861375025919 0.7806313970981651 1.0 22.486901233494322 -7.033843196309807 3.182288356315684 0.9097520506260722 1.1321372339794864 0.2920115850798154 0.15895509725622356 0.37968267634691527 7.757590000212232 0.08817228764816108 0.05006074217175393 9.250321000433858e-08 7.033843196309807 0.22238518335341417 HFILDECDK ddPTM_KYSE-520_SHP099_60min_R1 10 HFILDECDK 9 0 Q13838-2;Q13838;Q5STU3;A0A0G2JJZ9;F6WLT2;F6TRA5;A0A140T9X9;F6S4E6;A0A0A0MT12;F6UJC5;A0A140T996;A0A140TA18;A0A140T9X3;A0A140T9L4;A0A140T973;A0A140T9K1 Q13838-2 DDX39B Spliceosome RNA helicase DDX39B 0 ;;;;;;;;; 182.65 1.7038e-05 12545990000.0 21972930.0 19188390.0 12495690.0 11345800.0 19835340.0 19929590.0 14082880.0 16788320.0 16010250.0 16993070.0 False True 20754047.77095001 18266550.94203942 13301182.171210889 12424101.420760842 21396268.410353538 19805202.03630397 15506514.946063885 16730085.236343337 13103192.18555859 16842524.6202084 1.2322409044335545 1.084549457634303 0.7897380274719353 0.7376626545555919 1.2703718054644464 1.1759045916750996 0.9206764007017385 0.9933240778089673 0.7779826647744248 1.0 24.005605072453257 -4.524111535376482 24.9813304702143 0.9656402457070159 1.1953181098365302 0.21938535482925692 0.16141102385521455 55.96218915933787 1134056.9657224806 0.04424568392163281 0.11915922765510227 2.9914962627871578e-05 4.524111535376482 0.2296778641295143 HFKDEDEDEDVAS(ph)PDGLGR ddPTM_KYSE-520_SHP099_60min_R1 9 HFKDEDEDEDVASPDGLGR 19 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR;HFKDEDEDEDVAS(1)PDGLGR 236.64 3.3655000000000005e-26 9162080000.0 7678900.0 7390200.0 6819550.0 6491280.0 7268540.0 6529960.0 7001480.0 7428670.0 9453530.0 6494350.0 True False 7252936.109492358 7035163.699083645 7259149.104665801 7108209.299525496 7840532.7456645975 6489204.097474328 7709257.926259925 7402901.677634617 7737007.25609803 6436815.111527843 1.1267895665517724 1.09295724316894 1.1277547947066586 1.1043053398869942 1.2180764259676813 1.0081389608119489 1.197682051245069 1.1500876674827256 1.201993085406732 1.0 22.617915599378463 HFLPLDFSTQVNSSLTS(ph)PTGR ddPTM_KYSE-520_SHP099_60min_R1 3 HFLPLDFSTQVNSSLTSPTGR 21 0 P19793 P19793 RXRA Retinoic acid receptor RXR-alpha 1 HFLPLDFSTQVNS(0.001)S(0.001)LT(0.014)S(0.936)PT(0.049)GR;HFLPLDFSTQVNSSLT(0.001)S(0.998)PT(0.001)GR;HFLPLDFSTQVNSSLT(0.003)S(0.997)PTGR 228.19 8.877200000000001e-20 898689000.0 471283.0 461342.0 437741.0 484826.0 401772.0 534806.0 456230.0 568992.0 629641.0 437471.0 True False 445139.99251063145 439178.4378315397 465958.4852703637 530903.7172717479 433389.1706300243 531468.0773777872 502350.1807757157 567018.2995557314 515314.0663579452 433595.3472872874 1.0266253899991573 1.012876269496852 1.074639034264437 1.224422080617915 0.9995244952268214 1.2257236630946877 1.15856912192112 1.307713062658954 1.1884677028522481 1.0 18.725989750313165 -5.013190003022207 0.7494161967637767 1.184154928009101 0.9791381067590357 0.23281408708019646 0.09377558229792106 1.5468384212820034 1.2768776914876752 0.04258802339716645 0.22686486751624557 9.700854638195115e-06 5.013190003022207 -0.20501682125006537 HFLVEDK ddPTM_KYSE-520_SHP099_60min_R1 1 HFLVEDK 7 0 P53992;P53992-2 P53992 SEC24C Protein transport protein Sec24C 0 105.95 0.0065236999999999995 268600000.0 565270.0 503020.0 287880.0 264100.0 409400.0 447780.0 309350.0 339440.0 351010.0 393200.0 False True 533913.3462621921 478854.16415158723 306437.20542428613 289199.9845954396 441617.4508326419 444985.2389244429 340622.11696505686 338262.5618658913 287275.4322420273 389716.55390497117 1.370004278525931 1.228724208282801 0.7863079008417181 0.7420777529146436 1.1331760132014468 1.1418176478922384 0.8740252718341405 0.8679707302050441 0.7371394141806888 1.0 18.57206568828757 -4.620049817076417 5.000779925868164 0.9154927527461452 1.3375602420123316 0.5666328972030099 0.13812528623016057 0.14838646329994323 5.908104564527759 0.03880397237877386 0.10992155743343203 2.3985577693362448e-05 4.620049817076417 0.4220674892661864 HFPNIDR ddPTM_KYSE-520_SHP099_60min_R1 4 HFPNIDR 7 0 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ;;; 133.12 0.0010068999999999998 1778360000.0 1956920.0 1814100.0 1269190.0 1154840.0 1986130.0 1795620.0 1388170.0 1567940.0 1517040.0 1414170.0 False True 1848365.746576694 1726947.9129803851 1351004.0181758008 1264595.6463846925 2142427.131466134 1784412.8695285784 1528499.7708336276 1562501.1820999456 1241583.7774662976 1401641.5540076112 1.3187150033414727 1.2320895510286842 0.963872692210768 0.902224711281516 1.5285128536182797 1.2730878764449707 1.0905068891995247 1.1147651677651824 0.8858069125564435 1.0 20.418686021116798 -7.482149830951882 2.103542253899956 0.9482067586098242 1.1886544127416323 0.23528987782641142 0.17116422866265796 0.5539280638714839 4.478597498677554 0.15282115080062408 0.0517066531197477 3.294960169292811e-08 7.482149830951882 0.24044765413180813 HFRHDT(ph)PDS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 HFRHDTPDSSPR 12 1 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HFRHDT(1)PDS(0.568)S(0.432)PR 117.0 0.00014751 0.0 185440.0 184660.0 200500.0 168510.0 167460.0 147030.0 129080.0 134260.0 237460.0 110470.0 True False 175153.273534525 175788.6564196891 213424.55081134252 184525.1397356213 180638.14928293633 146112.33123199063 142128.66609940038 133794.28339651966 194343.24987946736 109491.32174435945 1.5997000560781722 1.6055030994156851 1.9492371396305415 1.6852946589360842 1.6497942156976662 1.3344649503193868 1.298081563315517 1.221962446566339 1.774964871948668 1.0 16.740457001135113 -6.19904599790295 3.5392373612423436 1.3354874027985029 1.7148642754112922 0.46395581374778627 0.20041735563317292 0.2294684234209225 5.741609749749742 0.06869595794532891 0.06705125168523898 6.32344873600239e-07 6.19904599790295 0.3793768726127893 HFS(ph)GLEEAVYR ddPTM_KYSE-520_SHP099_60min_R1 1 HFSGLEEAVYR 11 0 P50990-2;P50990;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 1 HFS(1)GLEEAVYR 85.417 0.0036308 285480000.0 148640.0 203320.0 154160.0 203920.0 186680.0 164230.0 164640.0 167100.0 187840.0 154500.0 True False 140394.6428935061 193552.2020104582 164097.40026472107 223300.49548921647 201370.65393609586 163204.9796519745 181283.4179315565 166520.36910143303 153732.99106105935 153131.25019918132 0.9168255513547469 1.2639627885144307 1.0716127508348285 1.4582294286683117 1.3150199823626363 1.0657849357312115 1.1838433872626064 1.0874355749387286 1.0039295758448739 1.0 17.224409204738727 -7.404868498877714 1.2859409061759428 0.992067416082551 1.201372901823724 0.20832454568669379 0.14066940750636578 0.7215167703675788 2.093501095273808 0.1270418993904595 0.04518179702112505 3.936692575192094e-08 7.404868498877714 0.20930548574117303 HFSQS(ph)EETGNEVFGALNEEQPLPR ddPTM_KYSE-520_SHP099_60min_R1 1 HFSQSEETGNEVFGALNEEQPLPR 24 0 Q6GYQ0-2;A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-3 Q6GYQ0-2;Q6GYQ0-3 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 HFS(0.285)QS(0.514)EET(0.201)GNEVFGALNEEQPLPR 180.35 2.9237e-11 270890000.0 86310.0 112350.0 98173.0 95957.0 103970.0 81878.0 91329.0 102410.0 141440.0 117330.0 True False 81522.21224528059 106952.53735921202 104501.38866235373 105076.72442947607 112151.84749162139 81366.96903089796 100561.42660514521 102054.76361267376 115758.06141224575 116290.54748135885 0.7010218286086274 0.9197010391266436 0.8986232408881306 0.9035706401358173 0.9644106930496574 0.6996868687366093 0.8647429114672026 0.8775843421756436 0.995421071784029 1.0 16.82737430851373 -7.731737405816326 3.7395969097642268 1.0034726852066 0.8563109402764355 0.32893936300787285 0.08275331570154569 0.2703950689647247 7.537781918840745 0.07181512758047598 0.02147352242415665 1.8546526917728813e-08 7.731737405816326 -0.14716174493016454 HFVDEK ddPTM_KYSE-520_SHP099_60min_R1 7 HFVDEK 6 0 H0Y562;H0Y6E5;A6PVN9;F6WIT2;A6PVN5;Q15257-4;Q15257-3;Q15257-2;Q15257 H0Y562 PPP2R4 Serine/threonine-protein phosphatase 2A activator 0 ;;;;;; 170.96 0.006954000000000001 4563680000.0 14172160.0 13198570.0 9140820.0 8055160.0 12846940.0 13279460.0 9351160.0 11628870.0 11955140.0 11325150.0 False True 13386002.033299461 12564490.885742541 9730051.883029103 8820719.984527845 13857921.08891036 13196577.964374416 10296466.511326855 11588532.164168656 9784387.940554257 11224817.981833374 1.1925362224103606 1.119349187316653 0.866833822942746 0.7858229860656625 1.2345786908383272 1.175660753317533 0.9172947417045876 1.0324026797515942 0.8716745301696333 1.0 23.420188715072353 -4.558574850532733 10.085777166396795 0.9927196385432717 1.1743888984357587 0.21868070682512897 0.13149763450910706 0.5697082567763498 156.82915864729597 0.03581220180132646 0.09544086063988902 2.7632816273099958e-05 4.558574850532733 0.18166925989248695 HFVGMLPEK ddPTM_KYSE-520_SHP099_60min_R1 2 HFVGMLPEK 9 0 P60981;F6RFD5;P60981-2 P60981 DSTN Destrin 0 ; 90.62899999999999 0.0030408 0.0 3463000.0 2943300.0 1816070.0 1992780.0 3152700.0 2851400.0 2242900.0 2673400.0 2271400.0 2439300.0 False True 3270900.4866806483 2801899.4500166276 1933136.778014738 2182173.2120488435 3400799.553590791 2833603.354926873 2469634.220594554 2664126.5993762524 1858971.0173343818 2417689.699746683 1.352903346952821 1.158916071946785 0.7995801852559018 0.9025861392706782 1.4066319403797414 1.1720293779734299 1.0214851892917913 1.1019307397700335 0.7689038909869859 1.0 21.205197661982506 -7.738690720972113 23.169397895840888 0.8844522731377624 1.106980753418248 0.20456807778738462 0.18097164064113824 151.92214237393668 154733.95847316028 0.12971248859468426 0.04891844509575903 1.8251950363379756e-08 7.738690720972113 0.22252848028048566 HFVGMLPEKDCR ddPTM_KYSE-520_SHP099_60min_R1 1 HFVGMLPEKDCR 12 1 P60981;F6RFD5;P60981-2 P60981 DSTN Destrin 0 92.19 0.012145 0.0 421300.0 489070.0 341990.0 224920.0 457670.0 346430.0 243290.0 295230.0 357560.0 308620.0 False True 397929.64915927197 465574.3430909637 364035.22260334727 246296.32917533605 493686.02521391126 344267.8018683165 267884.1274815858 294205.9160371997 292636.1173540905 305885.86690272694 1.3009089082426137 1.5220524825327038 1.1901014789908946 0.8051902877018485 1.6139550029322067 1.1254779612874208 0.8757649714060641 0.9618159839034293 0.9566840087029914 1.0 18.222633924842626 -6.529094340128633 10.117702372782663 0.9529620136753824 1.2776520262902273 0.3804535168323041 0.20310731753753306 0.1839466528039701 239.2215065545659 0.07853727776696164 0.06233920330224047 2.9573699786063247e-07 6.529094340128633 0.324690012614845 HFVLDECDK ddPTM_KYSE-520_SHP099_60min_R1 9 HFVLDECDK 9 0 O00148;K7EQN7;O00148-3;O00148-2;A0A0D9SEM9;K7EPJ3 O00148 DDX39A ATP-dependent RNA helicase DDX39A 0 ;;;;;;;; 183.47 1.158e-05 7206710000.0 10592760.0 9573140.0 6493060.0 5657110.0 9536090.0 9533600.0 6987820.0 7954400.0 7788230.0 8499160.0 False True 10005158.486656452 9113231.984823897 6911613.036863332 6194760.033527853 10286526.03006998 9474097.266090643 7694217.040151159 7926808.04297091 6374083.757301289 8423864.05464643 1.1877160435819012 1.081835120522538 0.8204801255133062 0.7353822418479024 1.2211172881400127 1.1246735707783562 0.9133833345645206 0.9409942980500314 0.7566698270475383 1.0 23.006050723485764 -6.9661605911780216 22.020162595799576 0.8947368985510421 1.0171038357617386 0.13598916330636757 0.15388369797616616 120.07575760473826 78134.9708578264 0.06981152693592851 0.04706604606294947 1.081034138143004e-07 6.9661605911780216 0.12236693721069647 HFYTFTNEHHR ddPTM_KYSE-520_SHP099_60min_R1 2 HFYTFTNEHHR 11 0 Q9Y2L1;F2Z2C0 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 0 ; 245.58 2.3694e-14 943730000.0 269230.0 318860.0 328280.0 437950.0 362530.0 229831.0 389670.0 296360.0 376670.0 128843.0 False True 254295.27520330096 303541.48698138224 349441.4540665718 479572.6363255315 391059.048486462 228396.53947751934 429061.64641271613 295331.996330944 308276.22307798767 127701.55125833709 1.9913248719184928 2.3769600603153624 2.736391614849379 3.755417468307553 3.062288943502019 1.7885181286128529 3.3598781078605304 2.312673522136741 2.4140366349532627 1.0 16.96241652476419 -8.472653365549936 1.0710119695910758 0.9984273252309296 2.728914495703908 0.4385607157712814 0.5684749954282043 1.7082287195942272 2.8842607208870628 0.5716540671692733 0.17886610398477965 3.367802650901584e-09 8.472653365549936 1.7304871704729785 HGAGS(ph)GCLGTMEVK ddPTM_KYSE-520_SHP099_60min_R1 9 HGAGSGCLGTMEVK 14 0 Q9BYG5-2;Q9BYG5 Q9BYG5-2 PARD6B Partitioning defective 6 homolog beta 1 HGAGS(1)GCLGTMEVK;HGAGS(0.996)GCLGT(0.004)MEVK;HGAGS(1)GCLGTMEVK;HGAGS(1)GCLGTMEVK;HGAGS(1)GCLGTMEVK;HGAGS(1)GCLGTMEVK;HGAGS(1)GCLGTMEVK;HGAGS(1)GCLGTMEVK;HGAGS(0.997)GCLGT(0.003)MEVK 260.47 1.2235e-24 8790700000.0 13333170.0 12612880.0 11056240.0 11927550.0 12755970.0 12354910.0 11542190.0 12131330.0 14277700.0 12057480.0 True False 12593552.481084563 12006938.312481144 11768942.921009475 13061140.765851343 13759792.26745884 12277798.423868828 12708987.206118997 12089249.24770372 11685229.591527274 11950660.107777504 1.053795553342586 1.004709213064056 0.984794380801629 1.0929221187833078 1.151383450233343 1.027374079183996 1.063454829398752 1.0115967769710077 0.9777894682087488 1.0 23.51058697345647 -7.431479475314646 3.649126037419037 0.989630237244366 1.0536454617300743 0.2731685714109917 0.04394806586745962 0.3653925135615371 8.918801174039578 0.031468591574285096 0.013072414187413514 3.702717039661045e-08 7.431479475314646 0.06401522448570829 HGAPAAPS(ph)PPPR ddPTM_KYSE-520_SHP099_60min_R1 6 HGAPAAPSPPPR 12 0 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR;HGAPAAPS(1)PPPR 78.324 0.009488600000000002 5217160000.0 3535050.0 3520620.0 3304780.0 2925500.0 3307750.0 3018720.0 2994740.0 3480020.0 4120130.0 3056230.0 True False 3338953.729552536 3351484.1306416444 3517811.406634953 3203538.6404163544 3568051.106476965 2999879.048742673 3297477.5450458536 3467948.622862776 3372018.2520251344 3029154.1799109606 1.102272625043695 1.1064092256737352 1.1613180438172204 1.057568697447589 1.1779034326281288 0.9903355427193382 1.0885802931109898 1.144857084483139 1.1131880557246023 1.0 21.530483580581276 -6.231855150635412 24.99931006210159 1.0777699576782898 1.1189839863984474 0.1863163201088882 0.053886774325132086 1585.2930331077125 1339606.5076547393 0.017724669713684933 0.017720880675965923 5.863336906014108e-07 6.231855150635412 0.04121402872015767 HGAPS(ph)PSHPISAPQAAAAAALR ddPTM_KYSE-520_SHP099_60min_R1 1 HGAPSPSHPISAPQAAAAAALR 22 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3;A0A0A0MSW3;H0YF36 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 1 HGAPS(0.975)PS(0.025)HPISAPQAAAAAALR 245.62 2.8256000000000003e-27 1256100000.0 248570.0 266570.0 248560.0 325220.0 211310.0 240780.0 210640.0 253400.0 277490.0 268430.0 True False 234781.32658798987 253763.57707027264 264582.5753100616 356128.8110190418 227938.89481056525 239277.20270719373 231933.54684829313 252521.01454400437 227104.81095364864 266051.9190353798 0.882464322900706 0.9538122408225402 0.9944772293669389 1.338568848930887 0.8567459149965905 0.8993628145015352 0.8717604732535323 0.9491418647140972 0.8536108733102131 1.0 18.0213482841702 HGDIHFDHFHPCAALTTDHIER ddPTM_KYSE-520_SHP099_60min_R1 2 HGDIHFDHFHPCAALTTDHIER 22 0 Q8IY21 Q8IY21 DDX60 Probable ATP-dependent RNA helicase DDX60 0 ; 170.11 5.0687e-10 1710070000.0 574070.0 553660.0 365600.0 404010.0 488290.0 430610.0 380460.0 461860.0 514300.0 338680.0 False True 542225.1927198266 527061.3425393968 389167.1609806824 442406.9889299638 526715.6450099432 427922.4032633306 418920.60973177786 460257.9154589348 420916.08444794896 335679.55868905265 1.6153059627384154 1.5701323744518663 1.1593412553940363 1.3179443832020021 1.5691025306007729 1.2747943453408925 1.2479777182972087 1.3711228567399358 1.2539223004575408 1.0 18.356725160784656 -3.7574829600043325 0.03883913622267655 1.3277727780849003e-13 3.0434919506934754 0.5275141491628597 0.1287840331160913 423.55330343804275 2.2276595533824937 62.22634333705858 119.54112481559079 0.00017479018418194148 3.7574829600043325 3.0434919506933427 HGEEGVEAEKK ddPTM_KYSE-520_SHP099_60min_R1 1 HGEEGVEAEKK 11 1 Q9H993 Q9H993 ARMT1 Protein-glutamate O-methyltransferase 0 130.56 0.00029621 38122000.0 118810.0 121900.0 82209.0 68734.0 104070.0 119670.0 83062.0 100780.0 117080.0 95797.0 False True 112219.37245813689 116043.74102436962 87508.3236790507 75266.45869436928 112259.71692269918 118923.09514066734 91458.71756700039 100430.4177022288 95821.22334661838 94948.31310893822 1.1818995913006147 1.2221780169093444 0.9216416891856594 0.7927098042069782 1.1823245010566839 1.2525035068734907 0.9632474192781701 1.057737777679112 1.009193530765298 1.0 16.534854748634196 -7.184548705820275 0.01257424222763632 3.5670164680440795e-06 2.091887624614293 0.04942591624043979 0.13763689980509844 2903.2765999872977 33.35083942084143 2751.1917566419156 2790.2418142029887 6.538096016066084e-08 7.184548705820275 2.091884057597825 HGEIDYEAIVK ddPTM_KYSE-520_SHP099_60min_R1 1 HGEIDYEAIVK 11 0 P62333;A0A087X2I1 P62333 PSMC6 26S protease regulatory subunit 10B 0 80.596 0.016502 179080000.0 231620.0 276470.0 202740.0 251060.0 253760.0 221240.0 216940.0 210450.0 246890.0 211400.0 False True 218771.57687697696 263187.96621006954 215808.94479546955 274920.6669160586 273729.468303105 219859.15909518898 238870.41233036818 209719.998069399 202060.9995904222 209527.1604667115 1.044120372698575 1.256104295136875 1.0299807639008025 1.3121003802260587 1.3064152050425633 1.0493110229979896 1.1400450986797894 1.0009203465663257 0.9643666202526737 1.0 17.676777743329673 -7.069661096903419 1.4591884803391142 0.9767178981717289 1.1830933965713044 0.40394878795375666 0.09805419240468206 0.4293107170164781 1.7236513346319031 0.07146626848151268 0.03200130325444745 8.518024857277486e-08 7.069661096903419 0.20637549839957547 HGENEHNLQGR ddPTM_KYSE-520_SHP099_60min_R1 1 HGENEHNLQGR 11 0 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;F2Z2I2 Q5W015 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 0 114.76 0.00030221 42975000.0 26437.0 26379.0 14836.0 18422.0 25918.0 20476.0 20521.0 22713.0 18100.0 13568.0 False True 24970.486909147065 25111.713244313774 15792.352298439306 20172.82134122374 27957.59914675234 20348.20168881346 22595.462945660027 22634.213904254048 14813.496263869112 13447.798075744266 1.8568457652696484 1.8673475838105913 1.1743448414000135 1.5000835993819217 2.078972259196793 1.513125165488276 1.680235144697433 1.6831167286099633 1.1015555245871924 1.0 13.715082346735462 -7.799836343154529 4.8816549207249205 1.0165533938035558 1.663827849583815 0.5306159897690881 0.2331137424154611 0.1593296157351737 8.387382898230909 0.22232987104102067 0.06105353747804258 1.5854905463501307e-08 7.799836343154529 0.6472744557802592 HGESAWNLENR ddPTM_KYSE-520_SHP099_60min_R1 4 HGESAWNLENR 11 0 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 0 ;;; 221.6 1.1506e-09 5834000000.0 3199070.0 3927900.0 2364630.0 3445050.0 3026390.0 2924250.0 2232390.0 2168310.0 2379180.0 2296840.0 False True 3021611.209912063 3739197.7881019013 2517057.8333417713 3772466.516207951 3264549.6751963785 2905998.6710545374 2458061.7672268385 2160788.6386973592 1947180.8862470794 2276491.7845144826 1.3273103950851706 1.6425263704166524 1.1056740245950833 1.6571404043140536 1.4340265567409562 1.2765249981669986 1.0797586812952547 0.9491748019456174 0.8553428127843489 1.0 21.118380822240873 -6.7633736664830355 1.7784279606170237 0.9255161925993673 1.4387387876898565 0.6848342084629435 0.1502165076082911 0.1971966309720909 1.275103575063731 0.07722480816774194 0.04788343391159968 1.7243536216357737e-07 6.7633736664830355 0.5132225950904892 HGEVCPAGWKPGSDTIKPDVQK ddPTM_KYSE-520_SHP099_60min_R1 3 HGEVCPAGWKPGSDTIKPDVQK 22 2 Q06830;A0A0A0MRQ5 Q06830 PRDX1 Peroxiredoxin-1 0 ;; 154.13 1.8413e-07 4907210000.0 5107200.0 4426720.0 3695310.0 3327050.0 5400470.0 4502060.0 3618990.0 4105870.0 4306160.0 3383480.0 False True 4823893.435049214 4214053.726557812 3933515.595305054 3643251.8316859445 5825456.26452896 4473960.973585642 3984832.827138745 4091627.695287266 3524269.893459812 3353504.9995076065 1.4384631708488593 1.2566117322552253 1.1729565323095121 1.0864011928477462 1.737124669676744 1.334114895979744 1.1882590983832844 1.220104844301123 1.0509213178382852 1.0 21.677238322192256 -7.565665817173606 1.35455775142657 1.0025554337429177 1.3247833256005028 0.33236390595622645 0.16734264050524114 0.5540211637674206 1.8417946692797156 0.16195074931765788 0.053462594436207156 2.7185303308813868e-08 7.565665817173606 0.32222789185758516 HGGPGPGGPEPELS(ph)PITEGSEAR ddPTM_KYSE-520_SHP099_60min_R1 5 HGGPGPGGPEPELSPITEGSEAR 23 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 HGGPGPGGPEPELS(0.501)PIT(0.205)EGS(0.294)EAR;HGGPGPGGPEPELS(0.884)PIT(0.078)EGS(0.038)EAR;HGGPGPGGPEPELS(1)PITEGSEAR;HGGPGPGGPEPELS(1)PITEGSEAR;HGGPGPGGPEPELS(0.994)PIT(0.006)EGSEAR 193.72 1.1027e-17 4353130000.0 2326060.0 2186580.0 2054700.0 1802900.0 2011060.0 2317280.0 1939060.0 2303300.0 2833990.0 2459200.0 True False 2197028.814914349 2081533.4146765075 2187149.2496362356 1974247.0739383511 2169318.9806338386 2302816.9959686287 2135079.1082019163 2295310.3898942606 2319408.8550741663 2437413.40122865 0.901377178695609 0.8539927669336885 0.8973238797053215 0.8099762941088179 0.8900086376567592 0.9447790000694285 0.8759610114253359 0.941699257391972 0.9515861584682352 1.0 21.21691953163776 -7.538885368549398 0.586663600812566 1.000303896665222 0.8675940331253637 0.6208489202109979 0.031917048969863554 0.5043765750683901 0.39649921172574976 0.0320276435214923 0.016566106272182062 2.8914429741780327e-08 7.538885368549398 -0.13270986353985836 HGGS(ph)PQPLAT(ph)TPLSQEPVNPPSEAS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 HGGS(0.995)PQPLAT(0.5)T(0.5)PLS(0.004)QEPVNPPS(0.038)EAS(0.749)PT(0.213)R;HGGS(0.999)PQPLAT(0.5)T(0.5)PLS(0.001)QEPVNPPS(0.051)EAS(0.748)PT(0.201)R 83.876 0.0024754 815350000.0 266525.0 248561.0 213927.0 217942.0 230089.0 243758.0 217490.0 260230.0 295490.0 234211.0 True False 251740.3269455848 236619.7564623326 227717.07671530216 238655.14215334854 248195.6952726713 242236.61590456072 239476.0116978507 259327.3228681383 241836.46469672283 232136.07275340057 1.0844515630839069 1.0193148943020807 0.9809637684239074 1.0280829658338935 1.069181934237041 1.0435113036563257 1.031619122600766 1.117134962232359 1.0417875249988702 1.0 17.82461120193913 -5.663636905568544 7.0552753865064926 1.0550259100069712 1.0237425670503937 0.06968229548521254 0.0367187060350435 0.46656164832043817 29.104804123756594 0.010907187062453794 0.014084418820841714 2.169517184276092e-06 5.663636905568544 -0.03128334295657753 HGGS(ph)PQPLATTPLSQEPVNPPS(ph)EAS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 HGGS(0.987)PQPLAT(0.007)T(0.007)PLSQEPVNPPS(0.667)EAS(0.873)PT(0.46)R 87.005 0.0012811 197470000.0 164630.0 153500.0 131380.0 165660.0 150330.0 133530.0 152300.0 147730.0 138580.0 137170.0 True False 155497.64571823154 146125.62959180275 139848.96501543233 181404.27659250464 162160.11573930396 132696.58973956152 167695.9703047619 147217.55911044113 113417.36531751262 135954.78051664523 1.1437453330241198 1.0748105291811514 1.028643233316171 1.3342986241686068 1.1927503771700794 0.9760347465186426 1.2334687288486375 1.082842093165065 0.8342285934081347 1.0 17.052767355526594 -7.612214679783196 5.84995367087507 0.921355620227051 1.1382563596566388 0.42000240718067006 0.10337950187942095 0.20243960793313467 10.453958596730601 0.07330133366121121 0.026644501051217923 2.4422230183230057e-08 7.612214679783196 0.21690073942958787 HGGS(ph)PQPLATTPLSQEPVNPPS(ph)EASPTR ddPTM_KYSE-520_SHP099_60min_R1 1 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 HGGS(1)PQPLATTPLSQEPVNPPS(0.602)EAS(0.369)PT(0.029)R 141.21 1.3349000000000001e-06 697580000.0 140120.0 118500.0 121960.0 106270.0 115530.0 135410.0 94222.0 110340.0 131170.0 81823.0 True False 132347.26427770514 112807.08212787379 129821.73674289956 116369.86884875948 124621.55372421848 134564.85596221092 103746.87927810424 109957.25629354967 107352.83452661386 81098.11187733081 1.6319401427975773 1.390995172594228 1.6007985110586571 1.434926981096438 1.5366763891213808 1.6592846966123456 1.279276136971376 1.3558547017700149 1.3237402455065292 1.0 16.30738070562059 -8.059601360686214 0.5947329081339648 0.9961880736644138 1.536095445992226 0.715912007709163 0.10100394319888993 0.4994065988215291 0.41289754894787917 0.10630338049484567 0.04558854476729163 8.71763415279282e-09 8.059601360686214 0.5399073723278123 HGGS(ph)PQPLATTPLSQEPVNPPSEAS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 10 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 HGGS(1)PQPLATTPLSQEPVNPPS(0.078)EAS(0.69)PT(0.232)R;HGGS(0.999)PQPLATTPLSQEPVNPPS(0.376)EAS(0.485)PT(0.138)R;HGGS(0.987)PQPLAT(0.006)T(0.007)PLSQEPVNPPS(0.127)EAS(0.822)PT(0.051)R;HGGS(1)PQPLATTPLSQEPVNPPS(0.175)EAS(0.789)PT(0.036)R;HGGS(0.992)PQPLAT(0.007)T(0.001)PLSQEPVNPPS(0.005)EAS(0.815)PT(0.18)R;HGGS(1)PQPLATTPLSQEPVNPPS(0.013)EAS(0.909)PT(0.078)R;HGGS(1)PQPLATTPLSQEPVNPPS(0.014)EAS(0.909)PT(0.077)R;HGGS(1)PQPLATTPLSQEPVNPPS(0.484)EAS(0.492)PT(0.024)R;HGGS(1)PQPLATTPLSQEPVNPPS(0.313)EAS(0.656)PT(0.031)R;HGGS(0.993)PQPLAT(0.005)T(0.002)PLSQEPVNPPS(0.257)EAS(0.601)PT(0.142)R 212.6 2.0374000000000002e-22 23674820000.0 3377852.0 2893371.0 2529869.0 2943740.0 2874554.0 2837089.0 2728858.0 2781920.0 3480365.0 2598500.0 True False 3190475.8159789783 2754369.1141215847 2692948.403673518 3223512.164532295 3100765.0458250465 2819381.67518627 3004717.5977275893 2772270.1688250094 2848418.4488619254 2575479.311602406 1.2387891456188538 1.069458838870609 1.0456105749100446 1.2516164078703846 1.2039564953429267 1.0947017366767793 1.1666634572413321 1.0764094109923812 1.1059760550317534 1.0 21.29640952050225 -8.076083588014304 0.8151613513951498 1.0015709087732714 1.151182678904937 0.3268241253100044 0.06645430109021437 0.943049160129653 1.4012717554243195 0.0666622195512723 0.024212216400067002 8.392984324493453e-09 8.076083588014304 0.1496117701316657 HGGSPQPLATTPLSQEPVNPPSEAS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 HGGSPQPLATTPLSQEPVNPPSEASPTR 28 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HGGSPQPLATTPLSQEPVNPPSEAS(0.93)PT(0.07)R;HGGSPQPLATTPLSQEPVNPPS(0.062)EAS(0.692)PT(0.246)R 174.13 1.5102e-10 2036640000.0 501250.0 649790.0 523910.0 868060.0 441680.0 568470.0 478520.0 557380.0 615790.0 541460.0 True False 473444.66328289744 618573.113045326 557682.0768856382 950560.1614082434 476437.70318456524 564921.9678667599 526893.4715051531 555446.5788734697 503978.05880264944 536663.0856495055 0.882200911415219 1.1526283986846002 1.0391660835227639 1.7712419333962797 0.8877780416142252 1.0526566536303752 0.9817956285692194 1.0350005314809965 0.9390958168712155 1.0 19.033657130235575 HGGTIPIVPTAEFQDR ddPTM_KYSE-520_SHP099_60min_R1 1 HGGTIPIVPTAEFQDR 16 0 P00367;P00367-2;P00367-3 P00367 GLUD1 Glutamate dehydrogenase 1, mitochondrial 0 69.37899999999999 0.036673000000000004 318150000.0 347070.0 381210.0 226670.0 202530.0 296890.0 375770.0 259990.0 310660.0 291700.0 247540.0 False True 327817.3352331079 362896.09939212445 241281.5108848232 221778.39030713515 320253.55392697366 373424.68004519615 286272.3264578795 309582.39296858886 238734.63315859766 245346.9881832059 1.3361375970440674 1.4791137322669805 0.9834296832886046 0.9039376922839112 1.3053086826068288 1.5220267540694319 1.1668059533875907 1.2618145234267844 0.9730489659825348 1.0 17.904464035796803 -7.762411995443374 24.99889070475497 0.9865243495695465 1.2412115592791209 0.24141372990644983 0.18305819906920834 41.35370143456333 1062637.5605505267 0.15983506187637098 0.05038535885861303 1.7281761391512166e-08 7.762411995443374 0.25468720970957437 HGGVCAPAAVATS(ph)PPGAIPK ddPTM_KYSE-520_SHP099_60min_R1 8 HGGVCAPAAVATSPPGAIPK 20 0 A0A494BZT8;Q9Y6A5;E7EMT0 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 HGGVCAPAAVAT(0.047)S(0.953)PPGAIPK;HGGVCAPAAVAT(0.001)S(0.999)PPGAIPK;HGGVCAPAAVAT(0.012)S(0.988)PPGAIPK;HGGVCAPAAVAT(0.006)S(0.994)PPGAIPK;HGGVCAPAAVAT(0.003)S(0.997)PPGAIPK;HGGVCAPAAVAT(0.004)S(0.996)PPGAIPK;HGGVCAPAAVAT(0.006)S(0.994)PPGAIPK;HGGVCAPAAVAT(0.004)S(0.996)PPGAIPK 178.32 1.3397e-09 30132550000.0 7782950.0 7755760.0 6293110.0 5393600.0 5798450.0 7471010.0 6094260.0 7303400.0 8555570.0 7529720.0 True False 7351214.248573818 7383161.647966909 6698773.939932015 5906206.12235503 6254755.026332513 7424380.655359556 6710327.27504596 7278066.210026375 7002094.156368544 7463012.538833525 0.9850196834484777 0.9893004479824851 0.8975965007529035 0.7913970520111406 0.8381005651251574 0.9948235537227159 0.8991445800377538 0.9752182744106634 0.9382396344550397 1.0 22.83132667936548 -7.510873983828977 0.9542878878403073 0.988803709560005 0.9077439531567189 0.1463035864658092 0.06361824102064256 1.159219705775636 1.9855216768167978 0.06559993598850598 0.024630708797652716 3.0840827069879516e-08 7.510873983828977 -0.08105975640328611 HGGYKPSDEHK ddPTM_KYSE-520_SHP099_60min_R1 3 HGGYKPSDEHK 11 1 P12277;G3V4N7;G3V461 P12277 CKB Creatine kinase B-type 0 ;; 161.94 7.4096e-05 6456560000.0 3507760.0 4314420.0 3111410.0 8559740.0 4316550.0 4028270.0 4138220.0 4217570.0 3759820.0 2228530.0 False True 3313177.560253801 4107148.787123549 3311976.4670320214 9373255.116020318 4656237.927190133 4003128.0727191134 4556551.662735213 4202940.23405824 3077131.465349186 2208786.9579701023 1.499998697610314 1.8594589995669208 1.4994549180405163 4.243621179579236 2.1080520737361033 1.8123649536567479 2.062920394514974 1.9028273500495427 1.393131851963261 1.0 21.074822843833545 -7.788284149918996 1.0637644026260649 0.9934884313068599 2.2195042914550807 0.2182759199750165 0.7367956262079985 0.7877797583399807 1.891246714773212 0.7289427806029429 0.24585868785050408 1.628230366521455e-08 7.788284149918996 1.2260158601482207 HGHFGWPGWEMGPPGNWS(ph)PRPPR ddPTM_KYSE-520_SHP099_60min_R1 3 HGHFGWPGWEMGPPGNWSPRPPR 23 1 E7EMC7;Q13501;Q13501-2;C9JRJ8;E9PFW8 E7EMC7 SQSTM1 Sequestosome-1 1 HGHFGWPGWEMGPPGNWS(1)PRPPR;HGHFGWPGWEMGPPGNWS(1)PRPPR;HGHFGWPGWEMGPPGNWS(1)PRPPR 169.91 1.0301000000000001e-10 1886880000.0 289551.0 661120.0 613810.0 705530.0 492220.0 637270.0 484770.0 537290.0 341420.0 382200.0 True False 273489.02882439183 629358.8028386494 653377.1747307242 772583.3590746715 530954.913651302 633292.5615466953 533775.282499274 535426.2663944281 279426.73449780064 378814.0053471001 0.721961239457868 1.6613926464043478 1.7247967749556858 2.039479396667945 1.4016242962421575 1.671777053138311 1.4090695564705582 1.4134278533440894 0.7376357013035123 1.0 18.531130144924443 -7.657833865424424 4.487172596713507 0.8723646177911387 1.5446777482892258 0.3788536846104573 0.3259608827202362 0.2144708147784789 7.221618612326312 0.24990367825044604 0.08474542822501065 2.1987008007300537e-08 7.657833865424424 0.672313130498087 HGHHGPGAQCAHK ddPTM_KYSE-520_SHP099_60min_R1 2 HGHHGPGAQCAHK 13 0 Q8TCJ2 Q8TCJ2 STT3B Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B 0 ; 189.57 1.42e-08 1374940000.0 331970.0 994830.0 508600.0 895640.0 469940.0 1126270.0 485800.0 1676340.0 547610.0 248760.0 False True 313554.962334212 947036.8735297268 541385.1697887721 980761.3563160147 506921.60440716066 1119240.531161357 534909.4049511063 1670525.1678006991 448177.82812471595 246556.17993235134 1.2717384022588416 3.8410591605919966 2.195788278100814 3.9778413040999836 2.0560085111078816 4.539494939727115 2.169523412870331 6.775434175931214 1.8177513467627717 1.0 17.911556888890196 -6.249108203367407 24.868399906961645 3.5532231359979294 2.7801109568770186 0.013331752564128663 1.6882513684241143 2527.396419950259 5097026.697786221 0.5213325648199425 0.5176019264081612 5.634972444274904e-07 6.249108203367407 -0.7731121791209108 HGINCFINR ddPTM_KYSE-520_SHP099_60min_R1 2 HGINCFINR 9 0 P78371-2;P78371;F8VQ14;F5GWF6 P78371-2 CCT2 T-complex protein 1 subunit beta 0 ; 162.25 0.00022393 1515270000.0 1033510.0 956310.0 709780.0 582850.0 994790.0 789810.0 699810.0 754590.0 726170.0 727820.0 False True 976179.1400488936 910367.4321494258 755533.5544881542 638243.888759758 1073074.3134191576 784880.5028248561 770553.6242874304 751972.5034126309 594315.8332560128 721372.0810353908 1.3532255623863019 1.2619942690917128 1.0473562456197794 0.8847637793850874 1.487546221471402 1.0880383694615836 1.0681777747503742 1.0424197486729996 0.8238686371157956 1.0 19.460384062614665 -7.130170122031848 1.567438025421892 0.9275271332280427 1.1847537492737674 0.3030622515102015 0.16274773415882243 0.5632987360247785 2.5837965030215013 0.12316570488318962 0.05311384685338761 7.410199117839696e-08 7.130170122031848 0.2572266160457247 HGIVEDWDLMER ddPTM_KYSE-520_SHP099_60min_R1 5 HGIVEDWDLMER 12 0 P61158;B4DXW1;F8WDR7 P61158 ACTR3 Actin-related protein 3 0 ;;;; 253.79 7.9346e-16 2937310000.0 1765510.0 1471380.0 991360.0 939720.0 1587580.0 1469290.0 1182110.0 1164510.0 1102300.0 1295680.0 False True 1667573.6408430708 1400692.696213595 1055264.651832084 1029030.7062628799 1712513.5139054356 1460119.6161045488 1301609.2150818272 1160470.586608677 902150.1067217072 1284201.2832237855 1.2985298041883975 1.0907111794012354 0.8217283891688754 0.801300169767515 1.3335242195105423 1.136986573038728 1.0135554543399474 0.9036516329398908 0.7024989917912253 1.0 20.292439914736082 -7.268855172375841 3.129456744842558 0.8415913983066518 1.0674787123670693 0.2230779213233225 0.17530035886492326 0.422597271502973 8.467450274644028 0.1125167948662432 0.05197564006437832 5.384493135414583e-08 7.268855172375841 0.2258873140604175 HGLAHDEMK ddPTM_KYSE-520_SHP099_60min_R1 4 HGLAHDEMK 9 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ;;; 158.87 0.0001698 4052480000.0 6104570.0 5519440.0 3638840.0 3442530.0 5772760.0 5930110.0 4316510.0 5407820.0 4732990.0 4406570.0 False True 5765937.332941413 5254277.817551661 3873405.4487498533 3769707.0161656123 6227043.3694886165 5893097.983827382 4752864.9558779225 5389061.534614674 3873598.324968501 4367531.2180595845 1.3201822826358904 1.2030315423563342 0.8868638265786083 0.8631207947817314 1.4257581820457323 1.34929727793579 1.0882268994953022 1.2338919324333844 0.8869079879615539 1.0 22.0583865845392 -7.763503026974659 24.999496095668302 0.9434539294888987 1.1642472298562268 0.20887079782482088 0.17694478838273184 98.51668496127658 1193308.2234411421 0.15728368512906085 0.048398079572090816 1.7238400760495016e-08 7.763503026974659 0.22079330036732803 HGLAHDEMKS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 29 HGLAHDEMKSPR 12 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR;HGLAHDEMKS(1)PR 198.78 2.7378e-08 163930009000.0 51712419.0 45124630.0 46188174.0 49464003.0 49034799.0 46825102.0 48540837.0 50194995.0 59356507.0 37084653.0 True False 48843828.03191845 42956775.04134948 49165537.599731304 54165046.97322525 52893558.7114581 46532849.16952831 53447818.516876474 50020880.2779449 48578861.58457576 36756111.82584343 1.3288627552160204 1.16869747390273 1.3376153014411807 1.4736337518469922 1.4390411848259843 1.265989432995761 1.4541205764668779 1.360886062022886 1.3216539827376323 1.0 25.131480826206936 -9.801319275181294 9.622409864831816 0.9999985651459138 1.3515142630356942 0.5934965142865811 0.08690477603762936 0.0 0.0 0.08983415995655077 0.021787984134675958 1.5800859988867684e-10 9.801319275181294 0.35151569788978043 HGLEVIYMIEPIDEYCVQQLK ddPTM_KYSE-520_SHP099_60min_R1 1 HGLEVIYMIEPIDEYCVQQLK 21 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 151.23 1.1847e-06 455410000.0 546850.0 351220.0 307440.0 368680.0 458020.0 272400.0 259150.0 308910.0 364420.0 248280.0 False True 516515.14038155146 334346.8640080324 327258.0743213922 403719.2363523166 494063.56822268345 270699.85055835044 285347.41106026975 307838.46331013634 298250.51428061747 246080.4323589171 2.0989687616778716 1.3586893553583146 1.329882555814412 1.6405986956471115 2.007732039019153 1.1000462245755689 1.1595696916042488 1.2509668499815658 1.2120041866864426 1.0 17.908770417640792 -6.286759723219056 24.782455035180092 1.161143525873809 1.6464880718609431 0.5652945006733414 0.23636741687648338 602.0516624365281 589259.8556959601 0.0858309824185972 0.07572587597093423 5.167021596729166e-07 6.286759723219056 0.48534454598713417 HGLLLPAS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 2 HGLLLPASPVR 11 0 Q96E09 Q96E09 FAM122A Protein FAM122A 1 HGLLLPAS(1)PVR;HGLLLPAS(1)PVR 54.486000000000004 0.043153 316840000.0 393600.0 394910.0 366890.0 380410.0 442130.0 513030.0 489470.0 580310.0 719110.0 623940.0 True False 371766.22337785223 375937.9308280049 390540.3164447555 416564.0520255627 476923.1156244158 509827.98947118444 538950.4043668536 578297.0400553723 588537.7512878956 618412.3770179745 0.6011623266185804 0.6079081609601712 0.6315208604458513 0.6736023849235718 0.7712056442404511 0.824414271799683 0.8715064969522573 0.9351317365993853 0.9516914168598366 1.0 19.2382096683499 -6.2323540752880024 0.5746343486012688 0.9944304117525394 0.5701091611396196 0.9947642302588775 0.010407268943345937 0.059020083167313754 0.04232633722314531 0.009095915787128506 0.010929022234506147 5.856604875695544e-07 6.2323540752880024 -0.4243212506129198 HGLQLGAQS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 8 HGLQLGAQSPGR 12 0 Q8N1G0;A6PVV7 Q8N1G0 ZNF687 Zinc finger protein 687 1 HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR;HGLQLGAQS(1)PGR 205.33 7.6935e-09 18107420000.0 10577860.0 9068020.0 8708180.0 8195500.0 9310780.0 8451550.0 8195430.0 9387900.0 11112330.0 8854680.0 True False 9991085.019358864 8632378.70782448 9269523.216380639 8974397.855933081 10043485.414908513 8398800.7415067 9023904.044088999 9355335.566052334 9094610.991043126 8776234.424036799 1.1384250393306234 0.9836084920637125 1.0562073400173537 1.0225795509009583 1.144395754448047 0.956993664447207 1.0282204882054962 1.0659851496707362 1.0362771265697213 1.0 23.0651706317424 -6.279050082867799 24.997057125966755 1.0222896944459636 1.0610024517962053 0.18497886947380993 0.05228609713675389 1870.0943635559454 2654451.264964835 0.01813821000954854 0.01603938428529486 5.259566095429991e-07 6.279050082867799 0.03871275735024171 HGLYEK ddPTM_KYSE-520_SHP099_60min_R1 5 HGLYEK 6 0 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4;A0A2R8Y8A0 E7ETK0 RPS24 40S ribosomal protein S24 0 ;;;; 96.04799999999999 0.024937 11994830000.0 14152100.0 12203900.0 8952370.0 8397640.0 12821100.0 12911500.0 9534000.0 11401500.0 10895300.0 10224400.0 False True 13367054.801488075 11617606.32557263 9529454.09449845 9195749.180757465 13830047.627919836 12830914.539222242 10497789.762873286 11361950.857630098 8916988.168162053 10133819.770462839 1.3190539307250346 1.1464192761188234 0.9403615132641355 0.9074316880551222 1.3647418190947538 1.2661478918956757 1.0359163672390657 1.1211913291320719 0.8799236980859381 1.0 23.27267474014519 -6.969092700599436 23.99747834557857 1.0160451947064704 1.1455620544243879 0.19029289620598377 0.14877379896969284 275.6202236816743 213999.794244982 0.06778595717220025 0.045700546583207526 1.0737601926719147e-07 6.969092700599436 0.1295168597179175 HGNRNSNSYGIPEPAHAY(ph)AQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAK ddPTM_KYSE-520_SHP099_60min_R1 1 HGNRNSNSYGIPEPAHAYAQPQTTTPLPAVSGSPGAAITPLPSTQNGPVFAK 52 1 P46109 P46109 CRKL Crk-like protein 1 HGNRNS(0.234)NS(0.206)Y(0.193)GIPEPAHAY(0.25)AQPQT(0.039)T(0.039)T(0.039)PLPAVSGSPGAAITPLPSTQNGPVFAK 93.391 1.1696e-05 608320000.0 51987.0 71178.0 72934.0 112230.0 58872.0 63224.0 53149.0 49717.0 79644.0 53187.0 True False 49103.17747648481 67758.50203964388 77635.44233852606 122896.30545682024 63504.891464140936 62829.39556424798 58521.81960425346 49544.543331035056 65182.6572618559 52715.80455885983 0.9314697534713456 1.2853546029822636 1.4727166357072707 2.331299056995334 1.2046651283342276 1.1918512121748197 1.1101380334413928 0.9398423062236695 1.2364917467792074 1.0 15.685947936106004 -5.9799487417221 24.999655015864132 1.1045256106183692 1.5222846557048912 0.2504370585793727 0.3354516215198939 359.4156728735796 448112.69973070116 0.11053097758519395 0.12531657142441646 1.047252144310933e-06 5.9799487417221 0.41775904508652206 HGRPGIGATHS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 HGRPGIGATHSSR 13 1 K7EM56;A0A0B4J2B4;S4R417;K7EQJ5;K7ELC2;P62841 K7EM56 RPS15 40S ribosomal protein S15 1 HGRPGIGAT(0.001)HS(0.597)S(0.402)R 53.328 0.044266 65291000.0 35477.0 37577.0 34843.0 45495.0 47795.0 32501.0 33688.0 37445.0 41243.0 29626.0 True False 33509.020088353835 35771.744515773076 37089.03553077114 49818.83112142946 51556.194583649536 32298.149203366207 37093.51180319647 37315.112034728685 33754.310851422844 29363.536688679225 1.141177932468634 1.2182369206759913 1.2630983768746902 1.69662229892888 1.7557896765046845 1.099940703526302 1.2632508201063344 1.2707976028349166 1.1495315162235356 1.0 14.841738123477493 -7.686768011473441 0.8862815005955065 1.0135069228276847 1.3796972850633982 0.24667273222874697 0.2037708527376938 0.8847981206210266 1.443853311739938 0.2140056129813319 0.07974145251776839 2.0569890912628416e-08 7.686768011473441 0.36619036223571344 HGS(ph)DPAFAPGPR ddPTM_KYSE-520_SHP099_60min_R1 12 HGSDPAFAPGPR 12 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 HGS(1)DPAFAPGPR;HGS(1)DPAFAPGPR;HGS(1)DPAFAPGPR;HGS(1)DPAFAPGPR;HGS(1)DPAFAPGPR;HGS(1)DPAFAPGPR;HGS(1)DPAFAPGPR;HGS(1)DPAFAPGPR;HGS(1)DPAFAPGPR;HGS(1)DPAFAPGPR;HGS(1)DPAFAPGPR;HGS(1)DPAFAPGPR 182.23 9.2593e-08 45462660000.0 23218980.0 21282360.0 19430740.0 17613400.0 20170200.0 18867700.0 17774560.0 17698230.0 21447050.0 18315690.0 True False 21930976.89351088 20259923.48012639 20683276.59068325 19287372.240338195 21757479.987260725 18749939.68568205 19571385.987788655 17636838.970927916 17552806.356133357 18153427.2359912 1.208090164375698 1.1160384877605274 1.1393593243746472 1.0624645137034412 1.1985329108612663 1.0328594949006764 1.0781096998029218 0.9715432100865732 0.9669141880456026 1.0 24.11373860855379 -6.807972569636741 1.145023226398931 0.9734406181167771 1.1399270265027936 0.6749817497912793 0.04725191943496375 0.287890764716824 0.7448114829300664 0.03185561494721104 0.01737431671422038 1.5560639106580516e-07 6.807972569636741 0.16648640838601658 HGS(ph)FNTVQASER ddPTM_KYSE-520_SHP099_60min_R1 1 HGSFNTVQASER 12 0 F8VSE7;Q96AV8-2;Q96AV8-3;Q96AV8 F8VSE7 E2F7 Transcription factor E2F7 1 HGS(0.874)FNT(0.126)VQASER 55.297 0.039713 59769000.0 170200.0 143910.0 125780.0 127780.0 150020.0 152460.0 133200.0 146520.0 154710.0 152250.0 True False 160758.66671471178 136996.34758668626 133887.98005511548 139924.1727815423 161825.7205029626 151508.44058783437 146665.1559067257 146011.7563180252 126618.56392172314 150901.18344870745 1.0653240951510163 0.9078546930896167 0.8872559975689329 0.9272569610370462 1.0723953040299945 1.0040242039541944 0.9719284670592288 0.9675984838624927 0.8390826435417706 1.0 17.20324459474068 -9.897763878912341 0.0021245597920719153 0.6177623126949402 1.3021056752213567 0.001089218509374934 0.07136520190041282 4142109.076843551 1738.0363975116363 283328.85314155754 276532.42007588095 1.2654241575407839e-10 9.897763878912341 0.6843433625264165 HGS(ph)FVNKPTR ddPTM_KYSE-520_SHP099_60min_R1 2 HGSFVNKPTR 10 1 P29353;P29353-6;P29353-2;P29353-7;Q5T181;Q5T182 P29353 SHC1 SHC-transforming protein 1 1 HGS(1)FVNKPTR;HGS(1)FVNKPTR 120.9 0.00033356 8773700000.0 1573960.0 1589850.0 1572100.0 1701710.0 1582270.0 1332800.0 1590660.0 1701870.0 1762080.0 1729560.0 True False 1486649.3011885297 1513471.2195864965 1673440.081448937 1863440.0067622338 1706785.6471152017 1324481.5008229436 1751459.4361455853 1695966.6101894423 1442130.6904220139 1714237.443977317 0.867236511728069 0.8828830713643675 0.9762008683967821 1.0870372790590443 0.9956529960955549 0.7726359644495487 1.0217134401649208 0.9893417135111204 0.8412665908615494 1.0 20.70913552447064 -1.000044823047631 0.005719819185814059 1.826786857246891 4.541669488666807e-05 0.022278623468907188 0.09113043233569344 268393.6503202259 119.19941601734564 17486.917835385364 20707.95989002208 0.09998967964445554 1.000044823047631 -1.8267414405520044 HGS(ph)GADS(ph)DYENTQSGDPLLGLEGK ddPTM_KYSE-520_SHP099_60min_R1 4 HGSGADSDYENTQSGDPLLGLEGK 24 0 J3QRU8;A0A0C4DGN6;Q9Y2X7;Q9Y2X7-3;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 2 HGS(0.938)GADS(0.529)DY(0.529)ENT(0.004)QSGDPLLGLEGK;HGS(1)GADS(0.623)DY(0.378)ENTQSGDPLLGLEGK;HGS(0.999)GADS(0.72)DY(0.281)ENTQSGDPLLGLEGK;HGS(1)GADS(0.611)DY(0.389)ENTQSGDPLLGLEGK 319.15 3.816599999999999e-61 1655550000.0 1583150.0 1425880.0 1369600.0 1551410.0 1520240.0 1481870.0 1520760.0 1614870.0 1979540.0 1595100.0 True False 1495329.5135687187 1357378.5845104852 1457886.6074374788 1698855.5399515755 1639874.239017623 1472621.0996582322 1674493.2619873278 1609268.3928834922 1620105.4361425098 1580968.654969021 0.9458312211749825 0.8585740016060489 0.9221476990421711 1.0745662379908882 1.0372591726366367 0.9314676132444183 1.0591565219995709 1.0179002523709275 1.0247549380884189 1.0 20.592377333750985 -5.12296545735064 5.854969237835219 1.019726779722263 0.8996101945688376 0.6092005744333515 0.04119624526799889 0.14550418149338848 6.327593193665745 0.01114591720601004 0.019676661225089657 7.534154860516148e-06 5.12296545735064 -0.12011658515342549 HGS(ph)GADSDY(ph)ENTQSGDPLLGLEGK ddPTM_KYSE-520_SHP099_60min_R1 3 HGSGADSDYENTQSGDPLLGLEGK 24 0 J3QRU8;A0A0C4DGN6;Q9Y2X7;Q9Y2X7-3;J3QL89 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 2 HGS(0.85)GADS(0.472)DY(0.674)ENT(0.003)QSGDPLLGLEGK;HGS(0.992)GADS(0.32)DY(0.689)ENTQSGDPLLGLEGK;HGS(1)GADS(0.352)DY(0.648)ENTQSGDPLLGLEGK 234.83 4.0231e-28 1297110000.0 781970.0 701710.0 650530.0 758000.0 698270.0 750170.0 833710.0 877610.0 998410.0 874760.0 True False 738592.5652814516 667998.7983118173 692464.2046848009 830040.0920989893 753219.8763871734 745487.9107685676 917989.5430254964 874565.7757457145 817123.9118679316 867010.3069529821 0.8518844117057369 0.7704623497031193 0.7986804760353942 0.9573589672954168 0.868755388888382 0.859837426141458 1.0587988812401499 1.0087143932801508 0.9424615893433019 1.0 19.725689618635442 -6.004117405304313 0.7025224707592272 1.0036441951823911 0.7996073685262989 0.5992920850972505 0.057569963781684434 0.5253352089895765 0.5766726857904343 0.040753687594925606 0.054892299457424736 9.905641238442732e-07 6.004117405304313 -0.20403682665609224 HGS(ph)GAFYSPELLEALTLR ddPTM_KYSE-520_SHP099_60min_R1 2 HGSGAFYSPELLEALTLR 18 0 A0A3B3IU88;Q96EK9 A0A3B3IU88 KTI12 Protein KTI12 homolog 1 HGS(1)GAFYSPELLEALTLR;HGS(0.999)GAFY(0.001)SPELLEALTLR 199.61 5.3247e-13 181647000.0 68316.0 87234.0 75615.0 85519.0 70743.0 71696.0 63740.0 64245.0 91211.0 69524.0 True False 64526.37529543034 83043.14769909644 80489.26388827765 93646.70004777504 76310.07162739031 71248.5186697192 70183.46124245264 64022.14908989568 74649.38164219697 68908.07144885356 0.9364124396272576 1.2051294710915619 1.1680672843676976 1.3590091563842928 1.1074184783132528 1.0339647761380584 1.0185085689786824 0.9290950645370418 1.0833183990297108 1.0 16.07238536040671 -6.1798074626073305 3.4948813050343475 1.007315357400541 1.1750664479638588 0.32923214703971126 0.10279881853836874 0.2791205032076399 6.562608684713976 0.036254577450080025 0.03573854893053311 6.609864206359486e-07 6.1798074626073305 0.16775109056331794 HGS(ph)KENLKR ddPTM_KYSE-520_SHP099_60min_R1 2 HGSKENLKR 9 2 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 HGS(1)KENLKR;HGS(1)KENLKR 90.73100000000001 0.0025137 1512910000.0 1852550.0 1666460.0 1106140.0 1167810.0 1972620.0 2047200.0 1398250.0 1490890.0 1763610.0 1356120.0 True False 1749785.358533131 1586400.7601925454 1177443.5542865773 1278798.31128512 2127853.9713275153 2034422.6654297193 1539598.7556049488 1485718.4505663426 1443382.8809901748 1344105.8318453953 1.3018211193465 1.1802647697871307 0.8760050930439024 0.9514119208376538 1.5831000215258868 1.5135881544658956 1.1454445915848388 1.1053582354646283 1.0738610359338123 1.0 20.35821530644933 -7.19184157040778 3.580444009209596 1.0632933773881976 1.2246514383982652 0.12192895013141591 0.20598780174019432 0.6718797333164945 16.83949857779953 0.12548832887904401 0.06542749673128986 6.429222110337616e-08 7.19184157040778 0.16135806101006755 HGS(ph)PEFCGILGER ddPTM_KYSE-520_SHP099_60min_R1 2 HGSPEFCGILGER 13 0 Q15464 Q15464 SHB SH2 domain-containing adapter protein B 1 HGS(1)PEFCGILGER;HGS(1)PEFCGILGER 167.29 5.2343e-07 534760000.0 1124740.0 1211780.0 923460.0 1110380.0 1110360.0 1011700.0 998870.0 1143540.0 1283120.0 1100390.0 True False 1062348.4300863962 1153564.2698811362 982987.7091882406 1215910.1813520798 1197739.0149158088 1005385.605028941 1099845.5276317631 1139573.3266442423 1050137.7528229684 1090641.4006904655 0.9740584113291889 1.0576934537335878 0.9012932285221602 1.1148578997480831 1.0981969088625663 0.9218296723308407 1.0084391871933989 1.0448652746198694 0.962862543232033 1.0 20.05674539556167 -9.402009255145218 14.164794101682535 1.0000000000209983 1.0117489811065534 0.0005837183120519507 0.06739410192398647 0.0 0.0 0.06432826612255577 0.01560189623153763 3.962695893595746e-10 9.402009255145218 0.01174898108555511 HGS(ph)PLPAGPCLFGPPLAGAPAGYSPGGVPSAYPELHAALDR ddPTM_KYSE-520_SHP099_60min_R1 1 HGSPLPAGPCLFGPPLAGAPAGYSPGGVPSAYPELHAALDR 41 0 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 HGS(1)PLPAGPCLFGPPLAGAPAGYSPGGVPSAYPELHAALDR 159.57 3.6604000000000006e-10 172990000.0 109310.0 124910.0 86800.0 149460.0 109420.0 108110.0 121170.0 103790.0 121780.0 108070.0 True False 103246.35639591739 118909.13610626763 92395.26688491052 163664.63346321255 118030.73148536321 107435.2453886316 133419.04610523977 103429.97671476798 99667.82182397674 107112.58387718772 0.9639050115185044 1.1101322720643683 0.8625995521763189 1.527968307167959 1.1019315118071835 1.0030123585835053 1.2455963741684573 0.9656192855300539 0.9304959157576954 1.0 16.708768456212567 -7.37418095806294 9.996028300332258 0.9597799860333829 1.1172980632756462 0.14192834235440932 0.1701009320036096 0.83120690567112 68.74178293797051 0.09315348630639501 0.044645386428420225 4.224925370542002e-08 7.37418095806294 0.1575180772422633 HGS(ph)SDISS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 HGSSDISSPR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 2 HGS(0.893)S(0.107)DIS(0.107)S(0.893)PR;HGS(0.888)S(0.112)DIS(0.001)S(0.999)PR;HGS(0.948)S(0.052)DIS(0.35)S(0.65)PR 129.54 8.5105e-05 190710000.0 563810.0 600180.0 551700.0 746310.0 601370.0 597750.0 536720.0 561420.0 721740.0 602200.0 True False 532534.3353726296 571346.4519114537 587263.4647512108 817239.0780137171 648694.3976727539 594019.2205258951 590976.8954824148 559472.5650564133 590690.2095848001 596864.9765045105 0.8922191053852282 0.9572457329587274 0.9839134274396025 1.3692193547689948 1.086836090587486 0.9952321612246687 0.9901349865482495 0.937351975873869 0.989654667030603 1.0 19.187045074671666 -6.392133729523942 4.663833372438149 0.9764710123042621 1.065053660887932 0.08925898655321118 0.11982268549602693 0.6187615939244792 20.777567912996005 0.04790210505147059 0.041776525573998864 4.0538368901951107e-07 6.392133729523942 0.08858264858366982 HGS(ph)VSADEAAR ddPTM_KYSE-520_SHP099_60min_R1 8 HGSVSADEAAR 11 0 A0A1B0GU90;A0A1B0GW73;H3BNF1;A0A1B0GTV3;A0A0S2Z5D0;H3BUV4;A0A1B0GUD2;H3BUT1;A0A1B0GTU6;Q9NWW5;Q9NWW5-2 A0A1B0GU90 CLN6 Ceroid-lipofuscinosis neuronal protein 6 1 HGS(0.997)VS(0.003)ADEAAR;HGS(0.988)VS(0.012)ADEAAR;HGS(0.997)VS(0.003)ADEAAR;HGS(1)VSADEAAR;HGS(0.995)VS(0.005)ADEAAR;HGS(0.999)VS(0.001)ADEAAR;HGS(0.993)VS(0.007)ADEAAR;HGS(0.956)VS(0.044)ADEAAR 138.89 0.00034051 1014572500.0 678844.1 860723.1 721695.3999999999 934816.7 730775.6 823282.0 841109.2999999999 963772.1 1199894.0 735696.1000000001 True False 641187.2645308364 819372.6703042868 768217.0402374673 1023661.3981051095 788283.4821756089 818143.5916570477 926136.8364797065 960428.9995311991 982023.4964662404 729178.4049169049 0.8793283786344499 1.1236930013000868 1.0535378380068883 1.4038558893166386 1.0810570867981746 1.1220074348612683 1.2701100721506506 1.3171385672627631 1.346753400600432 1.0 19.475912310113607 -3.5022911417645246 0.83905091796356 1.2260077157912337 2.2234026876461573e-12 0.3770497103207795 0.12624972921062183 7.652824201433573 1.6628608357324326 0.04408922442450083 11.723005366165241 0.0003145638837872637 3.5022911417645246 -1.2260077157890104 HGT(ph)PDPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 HGTPDPSPR 9 0 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 HGT(1)PDPS(1)PR;HGT(1)PDPS(1)PR;HGT(1)PDPS(1)PR;HGT(1)PDPS(1)PR;HGT(1)PDPS(1)PR 103.21 0.0062878 3239480000.0 3232000.0 3044830.0 2840670.0 2746620.0 3051310.0 3003370.0 2845100.0 2980960.0 3475700.0 2894470.0 True False 3052714.5171677303 2898551.7964169914 3023784.133432701 3007657.938998582 3291430.7374209743 2984624.853786468 3132710.4735001842 2970619.745521294 2844600.4952668403 2868827.247663585 1.0640984115212604 1.0103612194765699 1.0540140177123998 1.0483928376823883 1.1473087966874143 1.040364091709318 1.0919829613482337 1.0354822682127724 0.9915551720946337 1.0 21.452029665195543 -7.581631515639191 3.9308082186101863 0.9968655163289539 1.064334108313484 0.3968612687287484 0.0340409943856521 0.24109003968530723 7.4898575539677035 0.026486233180988143 0.00917726798975869 2.6204053917199586e-08 7.581631515639191 0.06746859198453015 HGT(ph)PQKYDPTFK ddPTM_KYSE-520_SHP099_60min_R1 2 HGTPQKYDPTFK 12 1 K7EMR2;K7ER17;K7EPV6;Q8IWA5;Q8IWA5-2 K7EMR2 SLC44A2 Choline transporter-like protein 2 1 HGT(1)PQKYDPTFK;HGT(1)PQKYDPTFK 176.04 2.315e-06 1592770000.0 1942790.0 2189530.0 1781980.0 3512700.0 3104600.0 3121100.0 2945300.0 4340500.0 4965200.0 2307700.0 True False 1835019.5658441503 2084341.6922484685 1896849.282068811 3846545.951868237 3348914.3572423533 3101620.057186736 3243039.6673579467 4325443.818580319 4063644.8425062406 2287255.57336343 0.8022800718967044 0.9112849987216013 0.8293123445227754 1.681729841065315 1.4641627268253825 1.3560443761978795 1.4178737632668779 1.8911064722949675 1.7766466020806824 1.0 21.125186147939317 -5.25524308032525 24.856200314370017 1.5371616159233839 0.8539916647977874 0.6264331764047127 0.23473393884419164 294.65829554260495 1182005.9082839906 0.06485639842035786 0.10881993897463839 5.555931974170041e-06 5.25524308032525 -0.6831699511255964 HGTDLWIDNMSSAVPNHS(ph)PEKK ddPTM_KYSE-520_SHP099_60min_R1 4 HGTDLWIDNMSSAVPNHSPEKK 22 1 Q8N6H7;H0YF45;E9PJT7;E9PK28;E9PN48;E9PIY6 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 HGTDLWIDNMSSAVPNHS(1)PEKK;HGTDLWIDNMSSAVPNHS(1)PEKK;HGTDLWIDNMSSAVPNHS(1)PEKK;HGTDLWIDNMS(0.013)S(0.448)AVPNHS(0.538)PEKK 214.19 1.2684e-19 1659110000.0 924950.0 1539670.0 1441350.0 5561300.0 1332190.0 1004450.0 1440670.0 1046700.0 1615750.0 1071620.0 True False 873641.1796578876 1465701.942108212 1534261.7272415378 6089844.27993419 1437025.7738757613 998180.8549681904 1586306.9831842533 1043069.2420016166 1322370.5297429005 1062126.280507745 0.8225398388977317 1.3799695657728566 1.4445191267728452 5.733634871573807 1.352970734505126 0.9397948937776158 1.493520132489261 0.9820576527896304 1.245021947023801 1.0 20.018523873537372 -5.971630645647342 24.999998100528234 1.1527478208308293 2.378316855063656 0.17541887300455394 1.2557759707755805 398.44222553576685 351118.51661805756 0.40990020412539885 0.4647759108282859 1.0675036148916755e-06 5.971630645647342 1.225569034232827 HGVDVEVQGPHEAR ddPTM_KYSE-520_SHP099_60min_R1 1 HGVDVEVQGPHEAR 14 0 Q5JR04;Q9HCE1-2;Q9HCE1 Q5JR04 MOV10 Putative helicase MOV-10 0 96.59100000000001 0.0019732 28456000.0 11893.0 6407.8 9889.8 4883.9 8520.8 5882.3 5256.8 5487.2 8797.3 6994.8 False True 11233.271581892284 6099.9596696961125 10527.312332239475 5348.064387601921 9191.338483279857 5845.586383771604 5788.208645423984 5468.166183922107 7199.932081885946 6932.831513872056 1.6203006750438667 0.8798655581764201 1.5184722593034523 0.7714112735757187 1.3257697760126874 0.8431744478536715 0.8348982134993803 0.7887349018912015 1.0385269088797906 1.0 12.759228984312559 -1.0000000000122842 0.4141319059343544 0.9031360465135111 11.338908306571035 0.3613716703816803 0.23784174788304824 83.18366916634473 1.079596967199173 0.15466792729812368 715.880432132271 0.09999999999717146 1.0000000000122842 10.435772260057524 HGVIVAADSR ddPTM_KYSE-520_SHP099_60min_R1 1 HGVIVAADSR 10 0 P28074;H0YJM8;P28074-2 P28074 PSMB5 Proteasome subunit beta type-5 0 94.29700000000001 0.0021014 0.0 197740.0 207820.0 115120.0 118040.0 161240.0 172380.0 111580.0 157400.0 159170.0 145000.0 False True 186770.96801508268 197836.0152558202 122540.81939851266 129258.48610997997 173928.67066989548 171304.1124788859 122859.59531585909 156854.0161374361 130268.74034917382 143715.41280829316 1.2995889888596903 1.3765817554984192 0.85266303038752 0.8994058715358682 1.210229767783535 1.1919675776695866 0.8548811356771152 1.0914209761667593 0.9064354184679113 1.0 17.132855266849287 -4.748320075291955 24.996843057921 1.0096041645091278 1.3380855642725582 0.5397578985684972 0.12434408764128309 183.57829550083292 349774.52635569545 0.033031740082193256 0.08624072772748748 1.7851714175087784e-05 4.748320075291955 0.3284813997634304 HGWPEDIWFHVDK ddPTM_KYSE-520_SHP099_60min_R1 1 HGWPEDIWFHVDK 13 0 G3V121;B7Z2L8;Q86WR0 G3V121 CCDC25 Coiled-coil domain-containing protein 25 0 148.68 7.909e-06 153300000.0 239340.0 251590.0 185540.0 182300.0 290530.0 242320.0 195200.0 185920.0 217520.0 163230.0 False True 226063.33308753857 239503.2387557108 197500.20527449617 199625.7371895062 313393.05811042356 240807.59099596014 214932.72096841477 185275.08691405418 178023.85123297272 161783.90919101835 1.3973165453717988 1.480389736861465 1.2207654411496978 1.2339035333471142 1.9371089478398016 1.4884520481677723 1.3285172922521213 1.1452009525576476 1.1003804526863044 1.0 17.303708600840633 -7.220157627733286 2.1997775356186478 1.0636609588856198 1.4589685186815473 0.4530263515957531 0.1867601746434878 0.3382186076698394 3.117110185175098 0.1344565562154428 0.058731658013687925 6.023409259918774e-08 7.220157627733286 0.39530755979592747 HGWQIER ddPTM_KYSE-520_SHP099_60min_R1 4 HGWQIER 7 0 O15541 O15541 RNF113A RING finger protein 113A 0 ;;; 119.29 0.004131 670910000.0 769699.0 687200.0 513866.0 474500.0 736460.0 739232.0 545946.0 648852.0 609065.0 591928.0 False True 727002.262113084 654185.8804917714 546990.6245746696 519596.33733637264 794415.2121157963 734618.1788838127 601135.5495994986 646601.2838551953 498474.1492791951 586683.9784330154 1.2391718349883136 1.1150566651556568 0.9323428705785294 0.8856494406480498 1.354076881795228 1.2521531282410632 1.024632633066071 1.1021287569198908 0.8496467733967757 1.0 19.162224068882015 -7.743223338723811 22.899402382057424 0.9248236041159419 1.1093183993250568 0.22321076114381155 0.14038443177808504 129.19015933544804 162408.6010317616 0.10230493969654716 0.03843480453008724 1.8062450140429226e-08 7.743223338723811 0.18449479520911494 HGYIGEFEIIDDHR ddPTM_KYSE-520_SHP099_60min_R1 13 HGYIGEFEIIDDHR 14 0 P62244;I3L3P7;I3L246;H3BN98 P62244 RPS15A 40S ribosomal protein S15a 0 ;;;;;;;;;;;; 222.74 5.0147000000000003e-14 42465400000.0 17465034.0 15336883.0 9737926.0 9246999.0 13990357.0 12129406.0 10519331.0 10707916.0 10645002.0 10835751.0 False True 16496213.748337897 14600076.119549267 10365648.291192489 10125831.00474838 15091318.501657564 12053701.877979308 11582727.63625714 10670772.738642393 8712137.975462943 10739754.6762267 1.535995397069318 1.359442236782903 0.965166207579925 0.9428363412399644 1.4051827957544876 1.1223442472723455 1.0784908953177885 0.9935769540679543 0.811204560821855 1.0 23.35645770302523 -4.603692995260528 4.112158438670068 1.0542989628342012 1.502545603051345 0.5599629739332135 0.1475151334751173 0.15956513843991812 4.995244643867303 0.04080337691698452 0.1257702287578025 2.4906173248166127e-05 4.603692995260528 0.4482466402171439 HGYIPGK ddPTM_KYSE-520_SHP099_60min_R1 1 HGYIPGK 7 0 Q9ULV4-3;Q9ULV4;Q9ULV4-2;H0YHL7;B4E3S0 Q9ULV4-3 CORO1C Coronin-1C;Coronin 0 76.592 0.033305 972660000.0 4021400.0 3878700.0 2465100.0 2452200.0 3603600.0 3813400.0 2708200.0 3652900.0 3369700.0 3326300.0 False True 3798324.925537848 3692361.4299526033 2624004.290299452 2685256.350719187 3887182.818320736 3789599.1560910926 2981971.2854849407 3640228.942493268 2757847.4232242964 3296831.5698222416 1.152113732562518 1.1199727228260217 0.7959169993148704 0.8144960680730107 1.179066244664214 1.1494670188126779 0.9044960964280389 1.1041598169024878 0.8365145033396395 1.0 21.652648753090386 -7.7620047285607745 24.999993422847623 0.9182572882115997 1.0207493707215736 0.08732295990410588 0.1398786158305203 44.3450067944161 1960132.5327633284 0.11766988405221517 0.03736967352615247 1.7297975252266554e-08 7.7620047285607745 0.10249208250997388 HHEDNLLR ddPTM_KYSE-520_SHP099_60min_R1 7 HHEDNLLR 8 0 O75643 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 ;;;;;; 123.16 0.0015368 3709640000.0 1454140.0 1570040.0 1141720.0 1180096.0 1511900.0 1524440.0 1215425.0 1453450.0 1389490.0 1369950.0 False True 1373475.9554437753 1494612.9217219127 1215317.0980165894 1292251.9690312007 1630877.9284657317 1514925.4044976945 1338292.0204048937 1448408.321187781 1137193.6421924583 1357813.3088049716 1.011535198938791 1.1007499425950833 0.8950546368456243 0.9517154977428581 1.2011061593593362 1.115709644819286 0.9856229952428004 1.0667212582137253 0.837518409061196 1.0 20.37285370061771 -7.744383142873363 24.994720501462847 0.9187591576756341 1.041153508678844 0.22613431420450103 0.09047319658766705 322.5555299900138 472686.6390533685 0.06389518015328416 0.02401596157844087 1.8014277856749064e-08 7.744383142873363 0.12239435100320983 HHEEEIVHHK ddPTM_KYSE-520_SHP099_60min_R1 15 HHEEEIVHHK 10 0 Q9UII2 Q9UII2 ATPIF1 ATPase inhibitor, mitochondrial 0 ;;;;;;;;;;;;;; 167.67 2.6082e-05 29383512700.0 4672725.0 6160758.0 4599066.0 4815369.0 4105222.0 6341727.0 5198759.0 7011175.0 5442576.0 3093677.2 False True 4413519.629403649 5864785.938193716 4895529.153125776 5273020.221966521 4428279.615881974 6302145.929448817 5724300.294718417 6986854.870345545 4454341.39457589 3066269.6268524383 1.4393775389981533 1.9126778306883558 1.5965749098689321 1.7196857627224837 1.4441912012896447 2.055313686134655 1.8668613629371136 2.27861725177692 1.4526907078123863 1.0 21.548053132667853 -6.25387114554512 24.960987252296686 1.819120479066356 1.6425811412023783 0.0 0.35158172334057497 1892.214057983156 6240769.365321433 0.1105352290338614 0.10849973023487244 5.573510895495255e-07 6.25387114554512 -0.17653933786397769 HHEEEIVHHKK ddPTM_KYSE-520_SHP099_60min_R1 7 HHEEEIVHHKK 11 1 Q9UII2 Q9UII2 ATPIF1 ATPase inhibitor, mitochondrial 0 ;;;;;; 220.1 5.7362999999999996e-11 5378790000.0 1456171.0 2266772.0 3292825.0 3915847.0 1993539.0 1847723.0 2869245.0 2393539.0 3423690.0 406221.6 False True 1375394.29182508 2157872.8706258624 3505085.768206279 4288007.921537668 2150419.1776146893 1836190.675378953 3159296.285732682 2385236.3718652 2802034.2002014345 402622.7926596225 3.416086512985466 5.359539772628146 8.705631752868696 10.650186724929783 5.341026928479567 4.560573094358494 7.8467894598395285 5.9242457589371496 6.959452498185505 1.0 18.619069320631066 -9.45358269780644 7.525584007100253 0.9999999999914584 6.608193852986987 0.40459727607882 2.010208643336748 0.0 0.0 2.068174108485599 0.5016059000855155 3.5189840809438075e-10 9.45358269780644 5.608193852995528 HHFETLTES(ph)PCR ddPTM_KYSE-520_SHP099_60min_R1 3 HHFETLTESPCR 12 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 HHFETLTES(1)PCR;HHFETLTES(1)PCR;HHFETLT(0.007)ES(0.993)PCR 232.92 3.6858e-15 2053030000.0 1386570.0 1517250.0 1404350.0 1574840.0 1512490.0 1495490.0 1379650.0 1378390.0 1706150.0 1271990.0 True False 1309654.198041233 1444359.0325613203 1494876.6480394483 1724512.3201070877 1631514.3581090923 1486156.092186153 1519118.486086439 1373608.6868086443 1396356.1685414524 1260721.1581932444 1.0388135310730529 1.1456609760014258 1.1857313874082793 1.3678776697763273 1.2941119830551877 1.1788142703307862 1.204959935996876 1.0895420274989123 1.1075852574272556 1.0 20.265817790131976 -7.651107684910503 1.1939651767981927 1.013587397205813 1.2111038205402698 0.36864528609373715 0.08424886367638447 0.5219850909529788 1.4299245091128936 0.08649004212553175 0.02880507140679414 2.2330184690568966e-08 7.651107684910503 0.19751642333445685 HHGDVMDLQFFDQER ddPTM_KYSE-520_SHP099_60min_R1 3 HHGDVMDLQFFDQER 15 0 B4E301;F5H0E3;B4DVD1;Q8NFH3-2;Q8NFH3 B4E301 NUP43 Nucleoporin Nup43 0 ;; 130.27 5.1041e-05 789470000.0 327570.0 327236.0 251094.0 251658.0 324453.0 278470.0 268423.0 301873.0 317283.0 221997.0 False True 309399.0391053945 311515.0913687498 267279.92100460484 275575.5006562631 349985.6052149567 276731.96543679846 295557.81639602856 300825.87302068784 259672.4052535462 220030.27929105228 1.4061657336539883 1.4157828294017796 1.2147415431448485 1.2524435343361835 1.5906247373889923 1.2576994690387233 1.3432597429241533 1.3672021595844113 1.1801666847409487 1.0 17.747342547173794 -7.996209719341488 2.781340117219014 1.0007263758388574 1.3544620740064666 0.5566466719236409 0.10122818515696766 0.19005140059838277 3.4854161856190844 0.09793209301325961 0.026411791201625276 1.0087656389142373e-08 7.996209719341488 0.3537356981676092 HHGKDS(ph)DKEER ddPTM_KYSE-520_SHP099_60min_R1 4 HHGKDSDKEER 11 2 Q92766-5;Q92766-3;Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766-5 RREB1 Ras-responsive element-binding protein 1 1 HHGKDS(1)DKEER;HHGKDS(1)DKEER;HHGKDS(1)DKEER;HHGKDS(1)DKEER 211.7 7.9715e-10 1379770000.0 455754.0 821730.0 436982.0 435524.0 997330.0 1973090.0 900010.0 875940.0 428338.0 1101280.0 True False 430472.41709692485 782252.8573581242 465150.5589159204 476916.0700149349 1075814.196968536 1960775.2134294258 990991.7940511409 872901.5685859318 350562.6167222741 1091523.515982876 0.3943775931472265 0.716661479027994 0.4261479959935354 0.43692697686452486 0.9856078968667986 1.7963655246252952 0.9078977956409761 0.7997093565134202 0.3211681760301844 1.0 20.05791178167433 -5.767194768423816 24.41338546674948 0.9968110605849346 0.5046536545346337 0.3069027452851625 0.3479266010512634 138.2393166707292 586387.020175995 0.11546800179884942 0.13456462072352574 1.709248594974142e-06 5.767194768423816 -0.4921574060503009 HHHHDS(ph)DSNS(ph)PCCK ddPTM_KYSE-520_SHP099_60min_R1 1 HHHHDSDSNSPCCK 14 0 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 2 HHHHDS(0.987)DS(0.014)NS(0.999)PCCK 139.04 3.8599e-06 89004000.0 34524.0 56528.0 39535.0 71706.0 46536.0 67092.0 51740.0 122660.0 37316.0 31164.0 True False 32608.88489811225 53812.31002974215 42083.48935823655 78520.916680805 50198.118446379616 66673.25394148628 56970.38413373862 122234.52108905923 30540.355059808826 30887.91120522513 1.055716739194588 1.7421802876925854 1.3624582471318918 2.542124527589359 1.6251703817993328 2.158554960175085 1.8444233329737514 3.9573579539551873 0.9887478261930024 1.0 14.914754691571828 -4.367721314441082 0.8199618741796527 2.1361172370283668 0.6510681714190518 0.08524009195536508 0.8230451476007288 4.468091345366086 2.5962182779108107 0.30059902144349365 5.875371729747489 4.288236070405969e-05 4.367721314441082 -1.485049065609315 HHHHDSDS(ph)NS(ph)PCCK ddPTM_KYSE-520_SHP099_60min_R1 1 HHHHDSDSNSPCCK 14 0 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 2 HHHHDS(0.164)DS(0.836)NS(1)PCCK 183.77 7.8637e-11 214650000.0 24393.0 67576.0 45794.0 86935.0 42122.0 70221.0 58206.0 123960.0 44238.0 30694.0 True False 23039.87166376004 64329.54752635609 48745.95451299063 95197.27626203919 45436.76175860413 69782.72469184264 64090.0305158173 123530.01169248146 36205.494349228786 30422.075039570664 0.75734057041775 2.1145680379356513 1.6023218156416252 3.1292170615651296 1.493545778830127 2.293818702408521 2.1066949060001328 4.060538655953062 1.1901060102618082 1.0 14.892830939817644 -4.1330440980861685 1.6836537136469276 2.250660003237583 2.193807982677903e-12 0.16057784101226924 0.880706917531516 2.3132847703856494 4.986925574444991 0.22987934751327668 9.282797351117997 7.361323471187269e-05 4.1330440980861685 -2.250660003235389 HHHKEDTLR ddPTM_KYSE-520_SHP099_60min_R1 1 HHHKEDTLR 9 1 Q13009-2;Q13009 Q13009-2 TIAM1 T-lymphoma invasion and metastasis-inducing protein 1 0 67.334 0.026449 37289000.0 15703.0 43393.0 41047.0 46296.0 23510.0 39803.0 25938.0 59801.0 31005.0 9709.0 False True 14831.923286845577 41308.33514577911 43692.9552975221 50695.95792060004 25360.103246398165 39554.57471282681 28560.066170485352 59593.5642886583 25375.273572445378 9622.985813487698 1.5413015850087783 4.292673391233813 4.540477991382 5.268214970196044 2.6353674148467645 4.110426376955334 2.9679006832219583 6.192835097515286 2.636943882519194 1.0 13.23226888655347 HHHLHPVAER ddPTM_KYSE-520_SHP099_60min_R1 4 HHHLHPVAER 10 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 0 ;;; 130.98 0.00038692 10206500000.0 2361750.0 6591100.0 2183010.0 2817870.0 979000.0 6298300.0 2306490.0 11346900.0 2119940.0 2323800.0 False True 2230739.0194680975 6274453.662557209 2323730.317539499 3085679.517576495 1056041.7302519693 6258989.973464233 2539652.5183731504 11307540.252286375 1735012.335338488 2303212.939889041 0.9685335562484141 2.724217788937694 1.0089081549061838 1.339728283102278 0.4585080745086666 2.7175038247943175 1.1026564128697107 4.909463669838154 0.7533008803875831 1.0 21.13521636869649 HHNHGS(ph)PHLK ddPTM_KYSE-520_SHP099_60min_R1 8 HHNHGSPHLK 10 0 Q9UK58 Q9UK58 CCNL1 Cyclin-L1 1 HHNHGS(1)PHLK;HHNHGS(1)PHLK;HHNHGS(1)PHLK;HHNHGS(1)PHLK;HHNHGS(1)PHLK;HHNHGS(1)PHLK;HHNHGS(1)PHLK;HHNHGS(1)PHLK 161.04 0.00025479 11617470000.0 1631617.0 4204480.0 3584990.0 3357820.0 2591342.0 4626420.0 3281480.0 8750110.0 2510250.0 1822428.0 True False 1541107.952462148 4002490.4697468528 3816084.19158681 3676946.2032346064 2795265.8726808997 4597544.796696638 3613204.0225585727 8719757.91070103 2054451.8782528944 1806282.705747529 0.8531931062387941 2.215871555992352 2.11267271698066 2.035642699525767 1.5475240192393254 2.5453074328107164 2.000353549896416 4.82746022145651 1.1373922098216962 1.0 20.784592279563146 -4.259112246256934 5.126551538381521 2.2646213614610464 0.7866095696639515 0.1233807490321408 1.0087891020488509 0.32513855641431755 28.217840951337337 0.24444260550656915 1.7028877484715856 5.506653549394273e-05 4.259112246256934 -1.478011791797095 HHPDLIFCR ddPTM_KYSE-520_SHP099_60min_R1 5 HHPDLIFCR 9 0 Q7RTV0 Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A 0 ;;;; 146.23 0.00036899999999999997 2025530000.0 2283210.0 2217790.0 1940420.0 1553650.0 2411930.0 1950420.0 1710490.0 1801420.0 1825450.0 1560660.0 False True 2156555.7898337035 2111244.0394293442 2065502.5779817733 1701308.4288780931 2601735.168995537 1938246.7053084364 1883403.0219736856 1795171.2944745875 1493994.2958497142 1546833.7665751067 1.3941742392969618 1.3648810137523155 1.3353099878050034 1.0998650699519017 1.6819746408536973 1.2530413721184595 1.2175859246619547 1.1605457116761375 0.9658402396772175 1.0 20.560886732482267 -7.289216331391191 1.3436138008951353 0.9837213045082538 1.3578618853850017 0.5287826039525179 0.13774308443509314 0.3704424600189418 1.1812216934475515 0.1157187798050501 0.04362260841987073 5.13787659183219e-08 7.289216331391191 0.37414058087674795 HHPHFLTHK ddPTM_KYSE-520_SHP099_60min_R1 4 HHPHFLTHK 9 0 F5H6E2;O00159-2;O00159-3;O00159 F5H6E2 MYO1C Unconventional myosin-Ic 0 ;;; 136.57 0.00052429 1840610000.0 1540770.0 1642050.0 1001720.0 1296080.0 694450.0 1168220.0 1089850.0 1389480.0 1545760.0 580295.0 False True 1455300.4166511549 1563163.4532327 1066292.4740086696 1419259.0535193372 749099.2641200001 1160928.705650795 1200022.673910998 1384660.21818707 1265088.9494385796 575154.0377626778 2.530279405343663 2.7178170552593746 1.8539250426833433 2.467615560937707 1.3024324179900764 2.018465714275002 2.0864370153411946 2.4074597886391156 2.199565449213773 1.0 19.133588864850193 -10.971926000154571 2.372318304628675 0.0008066479439855711 2.1648866291604882 0.46013407806831363 0.38197525104318486 7723146.288941697 3254384.164418551 42364509.65733475 0.09845667062143626 1.0667778750311478e-11 10.971926000154571 2.164079981216503 HHPVFSS(ph)SDPLEK ddPTM_KYSE-520_SHP099_60min_R1 1 HHPVFSSSDPLEK 13 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 HHPVFS(0.005)S(0.988)S(0.007)DPLEK 150.12 4.1336000000000005e-06 517580000.0 433240.0 435190.0 394630.0 563670.0 404600.0 444490.0 406310.0 470600.0 577400.0 384920.0 True False 409207.31355747144 414282.81916649203 420068.4812303244 617241.0273264349 436439.71814090566 441715.7730348058 447383.7800034662 468967.59843886556 472558.71506950364 381509.9082632289 1.072599438951222 1.0859031710407137 1.1010683395947123 1.6178898999932643 1.1439800348246187 1.1578094394603164 1.1726662147259006 1.2292409404876945 1.2386538457697256 1.0 18.541361000478528 -11.292166107819018 2.223386530266366 0.0851586109745294 1.2049409414404542 0.1421211686698408 0.1488982700496839 7650116.1073778765 1342286.6276295118 35040001.877474666 0.0389295277569322 5.103097806923665e-12 11.292166107819018 1.1197823304659247 HHQEEDAGPTQPS(ph)PAKPQLK ddPTM_KYSE-520_SHP099_60min_R1 10 HHQEEDAGPTQPSPAKPQLK 20 1 B8ZZ93;B8ZZH7;F8WCL7;J3KQ70;Q9C086;H7C171;C9JKY0 B8ZZ93 INO80B;INO80B-WBP1 INO80 complex subunit B 1 HHQEEDAGPT(0.001)QPS(0.999)PAKPQLK;HHQEEDAGPT(0.001)QPS(0.999)PAKPQLK;HHQEEDAGPTQPS(1)PAKPQLK;HHQEEDAGPT(0.001)QPS(0.999)PAKPQLK;HHQEEDAGPTQPS(1)PAKPQLK;HHQEEDAGPTQPS(1)PAKPQLK;HHQEEDAGPTQPS(1)PAKPQLK;HHQEEDAGPT(0.002)QPS(0.998)PAKPQLK;HHQEEDAGPTQPS(1)PAKPQLK;HHQEEDAGPT(0.023)QPS(0.977)PAKPQLK 231.07 4.2174e-20 18500030000.0 7582150.0 8831330.0 8289070.0 8651310.0 8650780.0 8919990.0 8476260.0 9808000.0 9276520.0 8498530.0 True False 7161553.024858708 8407059.650703423 8823396.71518092 9473527.9012888 9331547.16979483 8864317.03370771 9333123.081125682 9773978.337204408 7592137.810039066 8423239.635956284 0.8502136154702504 0.9980791256153044 1.0475063154461957 1.1246893488402194 1.1078335145495866 1.0523643416089694 1.1080206054313568 1.1603585745658032 0.9013322828464367 1.0 23.005943779792098 -4.291670584673521 1.7770616602385936 1.0746244124957651 0.7845702033958426 0.4573299596159761 0.06967384438778639 0.6860087344515878 2.2984975534950594 0.018393782691621237 0.32891186161006614 5.108923683918312e-05 4.291670584673521 -0.2900542090999225 HHQYEQHWYK ddPTM_KYSE-520_SHP099_60min_R1 1 HHQYEQHWYK 10 0 O14647;O14647-2 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 0 125.74 0.00024171 129410000.0 23214.0 47783.0 38945.0 48826.0 34127.0 34160.0 39683.0 61059.0 44346.0 15831.0 False True 21926.273144038285 45487.43295625479 41455.457014203166 53466.408359927824 36812.600743931536 33946.79476899137 43694.544908758166 60847.20058027775 36293.88427168726 15690.749656331622 1.397401247504479 2.898996794452038 2.642031637887666 3.407511402003202 2.3461339674791577 2.1634909429131683 2.7847327798723938 3.877902707836801 2.3130752237221337 1.0 13.937626661086536 HHRDEQKPATR ddPTM_KYSE-520_SHP099_60min_R1 5 HHRDEQKPATR 11 2 Q6UB99 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 0 ;;;; 132.14 0.00019049 3891260000.0 1002736.0 1120005.0 630221.0 565633.0 407512.0 979763.0 421358.0 1020905.0 993105.0 453039.0 False True 947112.2351753422 1066198.2786382209 670846.0540492532 619390.590256238 439580.87597389263 973647.9356923694 463952.9786977937 1017363.7188360195 812782.1661397648 449025.42691900843 2.109261922368095 2.374471944615584 1.494004601592985 1.3794109489660564 0.9789665565045622 2.168358131460533 1.0332443351397955 2.2657151640980975 1.8101027634819618 1.0 18.776437617067618 -4.765598648511635 24.998229240929383 1.543396461105817 2.2418670371327822 0.30325785372263314 0.4384140632344708 117.66007335529822 707183.5821022753 0.11217674102397822 0.2477192905111334 1.7155419863442466e-05 4.765598648511635 0.6984705760269652 HHS(ph)DS(ph)DEEKSHR ddPTM_KYSE-520_SHP099_60min_R1 1 HHSDSDEEKSHR 12 1 Q9UPT8 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 HHS(1)DS(1)DEEKSHR 136.63 5.8795e-05 247350000.0 61832.0 90903.0 110120.0 85603.0 82906.0 88757.0 79668.0 105070.0 98098.0 58063.0 True False 58402.05570096384 86535.88343181513 117218.51139822957 93738.68338251967 89430.2305293868 88203.03464026265 87721.61892475239 104705.53669352247 80285.87604933867 57548.606992330475 1.014830049817663 1.5037007488877672 2.0368609689171335 1.6288610321186794 1.5539947047077125 1.5326701939460932 1.524304818298088 1.8194278222490532 1.3950967754969013 1.0 15.812493386802185 -8.013509360476423 22.928079214782063 0.9999999833430293 1.5887146798980787 0.3382675412666243 0.2451002669304962 273.07932998864834 463472.2245248398 0.2412474139957364 0.06228981444853685 9.693723759077915e-09 8.013509360476423 0.5887146965550494 HHS(ph)VEIK ddPTM_KYSE-520_SHP099_60min_R1 2 HHSVEIK 7 0 Q14151 Q14151 SAFB2 Scaffold attachment factor B2 1 HHS(1)VEIK;HHS(1)VEIK 107.79 0.0022706999999999996 67077000.0 142819.0 163674.0 156931.0 127372.0 165617.0 168600.0 157219.0 208800.0 203732.0 154351.0 True False 134896.54536738206 155810.8553603174 167047.0233584778 139477.39658421182 178650.11566817196 167547.7048610054 173112.2308295758 208075.72153428625 166739.404465778 152983.57022326076 0.881771455395616 1.0184809723876267 1.0919278659446447 0.9117148748761822 1.1677732151724138 1.0952006455104302 1.131574002207817 1.3601180913128466 1.0899170690188644 1.0 17.22301719643848 -5.775283185315689 24.976688429103188 1.1560321259977389 0.9872924554217875 0.3791918157465709 0.10177072051111452 238.91132804651562 431036.91479115316 0.03144067423805431 0.035829618881463556 1.6777096968705947e-06 5.775283185315689 -0.1687396705759514 HHTAAFEER ddPTM_KYSE-520_SHP099_60min_R1 4 HHTAAFEER 9 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;; 125.97 0.0011108 1092829000.0 222464.1 276272.9 229400.5 499796.8 218457.8 183484.63 173102.0 143972.2 198542.5 151931.6 False True 210123.5729018114 263000.3351899226 244188.02328377744 547297.3376026126 235649.1860051466 182339.43436400252 190600.83947271784 143472.7940415642 162492.18684912886 150585.60422499635 1.3953762312356022 1.7465171159187476 1.6215894244374498 3.634459883594665 1.5648852174013468 1.210868962557413 1.265730814400645 0.9527656696000993 1.0790685317192896 1.0 17.20022433139283 -5.995670038030114 24.999979366623705 1.1399750012185168 2.1100799010898013 0.40167632431602995 0.5731079237334735 136.95844885019721 790748.8144786854 0.18621538486930042 0.21032136669719378 1.0100199729797248e-06 5.995670038030114 0.9701048998712845 HHVLHDQNVDK ddPTM_KYSE-520_SHP099_60min_R1 4 HHVLHDQNVDK 11 0 E9PFG7;A0A0D9SFS3;E9PDF2;E9PCR7;Q02218-2;Q02218 E9PFG7 OGDH 2-oxoglutarate dehydrogenase, mitochondrial 0 ;;; 121.08 0.00024704 1180710000.0 1271110.0 1823990.0 1175550.0 1451130.0 1738230.0 1965810.0 1629760.0 2288100.0 1614760.0 1218830.0 False True 1200598.9944050347 1736362.7825351937 1251327.833946502 1589044.9589018566 1875018.8118241904 1953540.650609806 1794512.0457248145 2280163.115146556 1321560.288787032 1208032.1144353899 0.9938469185201841 1.4373481977726519 1.0358398746140518 1.315399598995383 1.552126627610837 1.6171264217779937 1.485483725375574 1.8875020687775828 1.0939777784009517 1.0 20.20422737723289 -5.563384865437918 4.726212757233178 1.493118558977996 1.1814696828586566 0.1685015326557311 0.26447713697042946 0.2865024906055976 14.700624904512939 0.07435566949731849 0.09936760712029792 2.732845844760957e-06 5.563384865437918 -0.31164887611933945 HHVLHDQNVDKR ddPTM_KYSE-520_SHP099_60min_R1 6 HHVLHDQNVDKR 12 1 E9PFG7;A0A0D9SFS3;E9PDF2;E9PCR7;Q02218-2;Q02218 E9PFG7 OGDH 2-oxoglutarate dehydrogenase, mitochondrial 0 ;;;;; 225.33 4.3506e-11 28770666000.0 1126663.0 1463887.0 985837.0 1191609.0 976046.0 1380079.0 1141655.0 1439427.0 1456795.0 672034.0 False True 1064164.7574429929 1393559.671180817 1049385.6304149716 1304859.1610896904 1052855.2672579295 1371465.4150466872 1257064.628879074 1434433.9637017862 1192277.7508134365 666080.3015945398 1.5976523474654223 2.09217967840327 1.5754641413397625 1.959011785765122 1.5806731782001109 2.0590091191159914 1.8872568755895767 2.1535450909865865 1.7899910085303898 1.0 19.345336591265703 -6.260204047020252 24.75812523507124 1.8568879954769932 1.7800888565438653 0.0 0.33359376143090563 694.0058006832752 13909135.580192504 0.10562781171401404 0.09975767558244805 5.492827406213819e-07 6.260204047020252 -0.07679913893312795 HHVVHTHSKPYNCNHCGK ddPTM_KYSE-520_SHP099_60min_R1 1 HHVVHTHSKPYNCNHCGK 18 1 P52747-2;E7EN86;P52747;P52747-3 P52747-2 ZNF143 Zinc finger protein 143 0 178.14 2.6787e-08 29743000.0 16609.0 34403.0 38699.0 73345.0 20850.0 24684.0 41894.0 56302.0 28706.0 2570.5 False True 15687.665660779361 32750.22824004421 41193.59946058924 80315.68674802172 22490.776379727842 24529.937999935104 46129.05436603872 56106.7015029856 23493.714019371644 2547.7273698187396 6.157513494819296 12.854683208264255 16.16876277602654 31.524443195715975 8.827779866151051 9.628164414499464 18.105961773029353 22.02225488003348 9.221439584818341 1.0 11.314995188922591 -8.010547717023256 9.414553189407048 1.000133268577335 15.761147894998533 0.3062957655870472 6.926141706544416 0.23947702271482507 196.88373239852115 6.918186834050394 1.7876310711959886 9.760055403638333e-09 8.010547717023256 14.761014626421199 HHYDS(ph)DEK ddPTM_KYSE-520_SHP099_60min_R1 1 HHYDSDEK 8 0 Q9BQ39 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 1 HHYDS(1)DEK 121.36 0.00061736 370300000.0 311430.0 291220.0 207540.0 283660.0 322510.0 363800.0 278320.0 340340.0 283760.0 417760.0 True False 294154.3570796867 277229.35406986804 220918.3604757407 310618.9611145114 347889.70216911373 361529.38925524236 306455.30174144066 339159.4399759528 232236.33700748612 414058.9714123619 0.7104165768376457 0.669540749531967 0.5335432286907938 0.7501804877092388 0.840193610544064 0.8731350223424932 0.740124771831695 0.8191090240577916 0.5608774426872679 1.0 18.659476729372468 -5.487368278126811 10.47376391868835 0.7965224883361939 0.6410361420609828 0.307453373086531 0.11206265712962475 0.9178288577810414 267.2161069298768 0.030823722150629135 0.04521934337039454 3.2556051129574273e-06 5.487368278126811 -0.15548634627521107 HHYDS(ph)DEKS(ph)ETR ddPTM_KYSE-520_SHP099_60min_R1 2 HHYDSDEKSETR 12 1 Q9BQ39 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 2 HHYDS(1)DEKS(0.99)ET(0.01)R;HHY(0.003)DS(0.997)DEKS(1)ETR 125.52 6.2956e-05 680660000.0 503210.0 668430.0 592970.0 740490.0 727490.0 784680.0 663340.0 903210.0 724400.0 573310.0 True False 475295.93817573466 636317.6194661156 631193.7949855453 810865.9469635643 784739.3241481152 779782.5210577325 730396.8807745292 900076.9753207992 592867.2206379438 568230.9194284311 0.8364485668147426 1.1198222372449764 1.11080508540515 1.427000747828354 1.3810218650851742 1.3722986454909842 1.285387429302891 1.583998590267076 1.043356143369132 1.0 19.116117810174796 -4.4665756124476665 1.278421207691964 1.3250699465454803 0.7468196600620359 0.3852089081151565 0.1712932517827802 0.8910093482654697 1.6751456476872852 0.04891203713166972 0.6157372061253362 3.41526484350117e-05 4.4665756124476665 -0.5782502864834443 HHYDS(ph)DEKS(ph)ETRENGVTDDLDAPK ddPTM_KYSE-520_SHP099_60min_R1 1 HHYDSDEKSETRENGVTDDLDAPK 24 2 Q9BQ39 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 2 HHY(0.058)DS(0.942)DEKS(0.861)ET(0.136)RENGVT(0.003)DDLDAPK 113.65 0.00016377 467050000.0 99754.0 107680.0 116400.0 111700.0 89853.0 119530.0 79356.0 131620.0 134940.0 90641.0 True False 94220.44676533111 102506.89116902488 123903.33024658493 122315.93441617044 96923.91990636394 118783.96893259788 87378.07891992568 131163.4409403389 110438.29756057999 89837.99125763097 1.0487817619956845 1.1410194031950573 1.3791863387869372 1.3615168004525116 1.0788745223433642 1.3222019690083864 0.9726183510642961 1.459999707297526 1.229305063643653 1.0 16.455038049551398 -7.277792333179305 24.945312140549813 1.2584891969879042 1.1998229165930612 0.0007773856546906543 0.1655564494972584 4164.274584601538 6352277.312676892 0.08806612044948982 0.04253542544962521 5.27482027487178e-08 7.277792333179305 -0.05866628039484301 HHYDS(ph)DEKSETR ddPTM_KYSE-520_SHP099_60min_R1 5 HHYDSDEKSETR 12 1 Q9BQ39 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 1 HHYDS(0.989)DEKS(0.011)ETR;HHYDS(0.5)DEKS(0.5)ET(0.001)R;HHYDS(0.994)DEKS(0.006)ETR;HHYDS(1)DEKSETR;HHYDS(0.999)DEKS(0.001)ETR 247.38 9.256600000000001e-16 2788057000.0 877666.2 1274001.2 1182001.9 1458669.3 1210539.8 1158383.4 1120022.2 1358194.3 1371718.3 756544.9 True False 828980.3063018066 1212796.2700372115 1258195.6337439078 1597300.7917070827 1305802.3952307166 1151153.4995200941 1233244.9743392933 1353483.0409782322 1122648.8349243572 749842.5007690266 1.1055392371752968 1.6174013460071772 1.677946545379226 2.1301817249207886 1.7414355599896063 1.5351937218008973 1.6446720118884923 1.8050231076394327 1.4971795193963884 1.0 19.51622807375047 -8.076196164912465 6.0079788851990426 1.000021126836844 1.6699845644967624 0.4035272150027731 0.2398841811320125 0.6991090401011402 53.81109395976559 0.24010542794721934 0.062313090335354426 8.390808994781229e-09 8.076196164912465 0.6699634376599184 HHYEQQQEDLAR ddPTM_KYSE-520_SHP099_60min_R1 2 HHYEQQQEDLAR 12 0 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y7I0;K7EMY3;Q8TDI0;Q12873-3;Q12873-2;Q12873;A0A5F9ZHX5 A0A2R8YFD8;Q12873-3 CHD4;CHD5;CHD3 Chromodomain-helicase-DNA-binding protein 4;Chromodomain-helicase-DNA-binding protein 5;Chromodomain-helicase-DNA-binding protein 3 0 ; 177.54 1.7338999999999998e-06 273378000.0 91923.6 115296.9 73301.6 78099.1 105330.5 84025.7 87192.8 96466.2 92803.8 62034.1 False True 86824.4146628465 109757.86385982479 78026.73842270672 85521.61498264942 113619.41110143517 83501.26443854909 96007.09914372322 96131.58126758043 75952.9693134174 61484.526135799504 1.4121344038836592 1.785129865316113 1.2690467557702372 1.3909453379173766 1.8479350536179868 1.358085841860791 1.5614839241287226 1.5635085331105383 1.2353184465577853 1.0 15.907935751366066 -7.96048338389028 3.2656225497194065 1.002294873735021 1.5258394026589746 0.49030041942402036 0.17342756014529115 0.1737443573223663 4.1321975166467855 0.1616131057205657 0.04308764374855005 1.0952584591609259e-08 7.96048338389028 0.5235445289239535 HIADLAGNSEVILPVPAFNVINGGSHAGNK ddPTM_KYSE-520_SHP099_60min_R1 3 HIADLAGNSEVILPVPAFNVINGGSHAGNK 30 0 P06733;A0A2R8Y6G6;P06733-2;K7EM90;A0A2R8YEM5 P06733 ENO1 Alpha-enolase;Enolase 0 ;; 142.22 2.0569e-06 2223326000.0 2704430.0 1907260.0 1559580.0 2308360.0 2552500.0 1983950.0 1479240.0 1600510.0 1744740.0 1040038.0 False True 2554409.876752456 1815632.3667443772 1660113.0222162292 2527745.840366259 2753367.2282616454 1971567.4321411152 1628776.015191175 1594958.2043718405 1427939.1973161872 1030824.0724573199 2.4780269931639753 1.7613406741813855 1.6104717250721405 2.4521602743914555 2.6710350503341056 1.91261291312417 1.5800717685108314 1.5472651900432581 1.3852404454546818 1.0 19.97536670275705 -6.829588749225625 2.1532323404720253 1.3562337291164166 2.159052294658005 0.581560043621587 0.3299822104490086 0.2728356231440833 2.577691262691546 0.1835215517162788 0.11281168966254027 1.4805096782852254e-07 6.829588749225625 0.8028185655415885 HIAEEADR ddPTM_KYSE-520_SHP099_60min_R1 12 HIAEEADR 8 0 J3KN67;A0A2R2Y2Q3;P06753;P06753-7;A0A494C0P6;P06753-5;P06753-2;A0A087WWU8;P06753-6;P06753-4;P06753-3;P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YHD2;A0A2R8YGX3;A0A5F9UN72;A0A2R8YEU4 J3KN67;P06753-5;P06753-4;P67936 TPM3;TPM4 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain 0 ;;;;;;;;;;; 172.21 0.00018963 10685193000.0 4981726.0 5715915.0 4337411.2 4213418.2 5099204.0 5848610.1 4515216.5 4477823.0 4624846.4 3196296.0 False True 4705379.727955432 5441313.863636669 4617007.666055299 4613860.198917625 5500482.344298021 5812106.754934141 4971658.648086485 4462290.477144749 3785090.8766501937 3167979.304120657 1.4852937081486124 1.7175976675602136 1.4573983043544068 1.45640477919672 1.736274708974086 1.8346416428207761 1.5693469466860925 1.4085604888076617 1.194796592176864 1.0 21.59513147988689 -7.733972702456476 1.7030994850454046 1.0123019036761833 1.614652374289252 0.7485027286764743 0.1200930722888723 0.1827657708271273 1.0236482205337927 0.12145922760628483 0.03649405723985901 1.8451313911147956e-08 7.733972702456476 0.6023504706130687 HIAEEADRK ddPTM_KYSE-520_SHP099_60min_R1 6 HIAEEADRK 9 1 J3KN67;A0A2R2Y2Q3;P06753;P06753-7;A0A494C0P6;P06753-5;P06753-2;A0A087WWU8;P06753-6;P06753-4;P06753-3;P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YHD2;A0A2R8YGX3;A0A5F9UN72;A0A2R8YEU4 J3KN67;P06753-5;P06753-4;P67936 TPM3;TPM4 Tropomyosin alpha-3 chain;Tropomyosin alpha-4 chain 0 ;;;;; 156.83 0.00036124 13221740000.0 20418510.0 20308830.0 13563790.0 12323278.0 19030430.0 19584270.0 14269610.0 19146220.0 17280590.0 14762660.0 False True 19285854.547009435 19333163.322624702 14438133.606231341 13494478.635991352 20528016.572664928 19462037.30651391 15712121.436773041 19079806.231581364 14142870.464223972 14631874.317575702 1.318071364503412 1.321304632818083 0.9867589956597945 0.9222658931523134 1.4029656165107174 1.3301123891650881 1.0738283486962263 1.3039892099580734 0.9665795479965036 1.0 23.802611252243704 -7.77625587580242 24.799955895857796 0.9832895143849306 1.2005041732426829 0.2526379181801859 0.15382512380858754 380.0059362771176 636035.8638939521 0.15408716464280514 0.04047930033303694 1.6739563308563938e-08 7.77625587580242 0.21721465885775226 HIAFT(ph)PESQR ddPTM_KYSE-520_SHP099_60min_R1 1 HIAFTPESQR 10 0 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YEN2;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-3 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 HIAFT(0.991)PES(0.009)QR 142.89 0.0068318 0.0 168790.0 145690.0 133250.0 144910.0 143360.0 153220.0 141210.0 145380.0 164490.0 146710.0 True False 159426.8822254768 138690.83371485176 141839.50820753805 158682.2028312198 154641.61639317917 152263.69714592674 155484.88487679212 144875.71071194712 134622.76245546003 145410.26353865297 1.0963935993630733 0.9537898518283405 0.9754435811873365 1.0912723694296784 1.0634848780950894 1.0471317047400301 1.0692841144288354 0.9963238301499691 0.9258133448033714 1.0 17.14976957748892 -7.507054466700417 6.7186154199172945 0.9618908865326271 1.0389689769751371 0.32570217537001744 0.046550662729649576 0.18201899096597624 39.94852018596904 0.029376168746662303 0.012647126028565523 3.1113261081228894e-08 7.507054466700417 0.07707809044251002 HIALS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 HIALSPR 7 0 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 HIALS(1)PR;HIALS(1)PR 104.2 0.0042504 1369980000.0 1442090.0 1463540.0 1432190.0 1348140.0 1404570.0 1298730.0 1266270.0 1443980.0 1587570.0 1320750.0 True False 1362094.3929648567 1393229.341581675 1524511.25898502 1476266.8202669274 1515101.6680898974 1290624.1443305684 1394276.9292042754 1438971.170407465 1299307.3073829114 1309049.182527951 1.0405219384763438 1.0643063378956936 1.1645943325375925 1.1277397671308702 1.1574062214866756 0.9859248694065097 1.0651066039487822 1.0992491264756128 0.9925580526117234 1.0 20.320087871386715 -6.258677227578071 24.999774499192476 1.0370544809121178 1.1122414563211929 0.4180516060291719 0.048046483479649044 294.47020461558714 2665197.656274269 0.01704729810792212 0.01630436973793925 5.512172148866333e-07 6.258677227578071 0.07518697540907504 HIDALEDKIDEEVRR ddPTM_KYSE-520_SHP099_60min_R1 6 HIDALEDKIDEEVRR 15 2 F8W7U8;P49959-2;P49959;P49959-3 F8W7U8 MRE11A Double-strand break repair protein MRE11A 0 ;;;;; 235.88 1.6957e-18 5861830000.0 3364620.0 2773790.0 2106240.0 1969100.0 3190020.0 2620860.0 2209980.0 2545790.0 2649710.0 2058780.0 False True 3177977.821396316 2640532.9648563247 2242011.600503153 2156242.6719684973 3441056.425269037 2604502.2405813434 2433386.3457263154 2536959.248681855 2168589.4577534036 2040540.8109066037 1.5574193882377456 1.2940358510561458 1.098734016256718 1.0567015667824295 1.686345309477143 1.276378412360287 1.1925203028138271 1.243277877669447 1.0627523086832595 1.0 20.960520134173453 -7.682320361267864 1.2074456532905087 0.9970260990996779 1.3125467897861933 0.2791806869513478 0.17982080939203196 0.6582665752222034 1.8754892880970215 0.1760647069575798 0.05801759923087686 2.0781631456442423e-08 7.682320361267864 0.31552069068651545 HIDCAHVYQNENEVGVAIQEK ddPTM_KYSE-520_SHP099_60min_R1 1 HIDCAHVYQNENEVGVAIQEK 21 0 P15121;E9PCX2;E9PEF9 P15121 AKR1B1 Aldose reductase 0 84.499 0.0035287 429930000.0 585360.0 493950.0 357760.0 463930.0 378940.0 456730.0 483560.0 531000.0 435380.0 384490.0 False True 552888.9139137691 470219.900565934 380821.78203623905 508021.76771435986 408760.4221263339 453879.3786546092 532442.9638908127 529158.0849363314 356325.9670366484 381083.7177286936 1.4508332111617253 1.233901840174393 0.9993126557754403 1.3330975428240095 1.0726263104668887 1.1910227531099644 1.3971810894053387 1.3885612539160146 0.9350333022895744 1.0 18.539748442980784 -7.775645705951046 24.99865098508272 0.9675163897678701 1.2475584072166372 0.41602441261453615 0.13734144736660991 279.5225759451721 491856.98040931585 0.13402387215701209 0.03527325171733349 1.6763098388558654e-08 7.775645705951046 0.2800420174487671 HIDFSLR ddPTM_KYSE-520_SHP099_60min_R1 6 HIDFSLR 7 0 P46781 P46781 RPS9 40S ribosomal protein S9 0 ;;;;; 158.36 0.0020859999999999997 1990850000.0 493368.0 408739.0 333846.0 354566.0 491834.0 457755.0 361606.0 377952.0 387892.0 356436.0 False True 465999.89353527495 389102.56491025287 355366.247332486 388263.84603584494 530538.5376473416 454897.9812494041 398160.66341446975 376640.9727266602 317460.5907615866 353278.25434301153 1.319073245540943 1.1014053656765925 1.0059103354475 1.0990312629286958 1.50175826314014 1.287647840355682 1.1270454904022487 1.0661312098790119 0.8986134494803969 1.0 18.430445422881274 -7.340403040108778 2.2598636692657443 0.9563892161274725 1.2092253216105544 0.3799814837912727 0.13394618327463761 0.3923463163318363 3.7600746904338833 0.10809782093776223 0.04220459137063459 4.566641929391459e-08 7.340403040108778 0.2528361054830819 HIDIHPENTHILDGNAVDLQAECDAFEEK ddPTM_KYSE-520_SHP099_60min_R1 1 HIDIHPENTHILDGNAVDLQAECDAFEEK 29 0 D6R917;D6RB13;D6RAY7;D6R9P4;D6RFF8;P46926 D6R917 GNPDA1 Glucosamine-6-phosphate isomerase;Glucosamine-6-phosphate isomerase 1 0 140.9 1.1326e-06 363740000.0 266590.0 231200.0 150090.0 194720.0 222780.0 202090.0 169560.0 190690.0 214590.0 168490.0 False True 251801.72126601049 220092.8049617252 159765.04155249105 213226.13025529726 240311.5185551929 200828.6813485209 186700.7795461288 190028.5408973808 175625.8653736834 166997.30968323647 1.5078190286037096 1.3179422194237813 0.9566923075319973 1.2768237444049155 1.4390143111348328 1.2025863274651334 1.117986750207331 1.1379137859036794 1.0516688305147772 1.0 17.349465335591727 -1.0000000033276195 0.1031113491757902 0.8723384008683733 2.3374598815153385 0.3909403670312419 0.13595354641112883 151.89249071133955 1.1072011468271559 1.7182622801096565 31.528443388217884 0.0999999992337873 1.0000000033276195 1.4651214806469652 HIEEVRK ddPTM_KYSE-520_SHP099_60min_R1 2 HIEEVRK 7 1 P16949 P16949 STMN1 Stathmin 0 ; 91.626 0.017411000000000003 1591400000.0 1781140.0 1204610.0 1050720.0 873370.0 1212840.0 1059740.0 783380.0 1064020.0 1053350.0 785060.0 False True 1682336.6135854379 1146738.7274435272 1118451.0924114417 956374.8222117356 1308283.6078843698 1053125.7695694068 862571.6954520325 1060329.1629641342 862088.1927926261 778104.9791674375 2.162094651271242 1.4737583721293277 1.437403849552756 1.2291077011678355 1.681371592409313 1.3534494673151147 1.1085543963167712 1.3627070785470015 1.1079330114492385 1.0 19.56960528608408 -1.0000000275564322 0.7879563452979359 1.2712620757565323 199.9999997962457 0.6893573157027848 0.17879697968079758 280.1025296784321 1.0248455292099443 0.06474247557468601 99240.19263958768 0.09999999365489719 1.0000000275564322 198.72873772048916 HIEPELAGRDS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 6 HIEPELAGRDSPIR 14 1 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR;HIEPELAGRDS(1)PIR 191.64 5.6683999999999994e-11 11528680000.0 5907290.0 5538200.0 5427640.0 5417840.0 5729350.0 5707250.0 5428950.0 5761680.0 6261860.0 5426320.0 True False 5579600.847809339 5272136.5589923225 5777514.35893105 5932749.884667001 6180217.249457727 5671628.9357531015 5977761.247446075 5741694.07686622 5124864.072644831 5378247.026413077 1.037438559517143 0.9802704362779107 1.0742374477329013 1.1031010393406455 1.14911368315849 1.0545497274296252 1.1114701905823083 1.067577232631417 0.9528874459421707 1.0 22.358704589986154 -7.749397920113169 22.642478169128687 0.9764437670549879 1.0735339736552465 0.4287964767145054 0.0441959313184886 62.92222480310181 118322.91799986393 0.033404328567537646 0.012354102811606281 1.7807464198847788e-08 7.749397920113169 0.09709020660025858 HIEPELAGRDS(ph)PIRAEMPGNLQHYGR ddPTM_KYSE-520_SHP099_60min_R1 5 HIEPELAGRDSPIRAEMPGNLQHYGR 26 2 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 HIEPELAGRDS(1)PIRAEMPGNLQHYGR;HIEPELAGRDS(1)PIRAEMPGNLQHYGR;HIEPELAGRDS(1)PIRAEMPGNLQHYGR;HIEPELAGRDS(1)PIRAEMPGNLQHYGR;HIEPELAGRDS(1)PIRAEMPGNLQHYGR 283.95 4.838899999999999e-49 16696100000.0 3176320.0 3528310.0 3536450.0 3283060.0 3165470.0 3067740.0 2901110.0 2936280.0 4367950.0 2477350.0 True False 3000123.1977630625 3358804.691498721 3764415.2255200585 3595081.0353120216 3414574.4799394268 3048593.096739623 3194382.510905112 2926094.7300129016 3574840.3870589496 2455402.606349135 1.221845733162211 1.3679242185430551 1.5331152682603264 1.4641513477325174 1.3906373118241722 1.2415858356004947 1.300960788526141 1.1916965154499144 1.455908036350207 1.0 21.22752816843091 -6.227488096524437 5.658971248359565 1.2537221963255976 1.406450546018068 0.2657353462012345 0.12906372664029836 0.2861321731358481 26.996324717465587 0.04282804294985144 0.04191552384884286 5.922593197504115e-07 6.227488096524437 0.1527283496924705 HIFSEDTSDFSGMSETK ddPTM_KYSE-520_SHP099_60min_R1 1 HIFSEDTSDFSGMSETK 17 0 P36952 P36952 SERPINB5 Serpin B5 0 125.61 0.00085168 0.0 84409.0 77151.0 58009.0 93817.0 85886.0 90205.0 71369.0 59687.0 61167.0 55276.0 False True 79726.66450483009 73444.55015398806 61748.3529576817 102733.33947289054 92644.73957550625 89641.99713515415 78583.67501431752 59479.95972805052 50060.61469459011 54786.29764407723 1.4552300106639726 1.3405642160951519 1.1270765796008688 1.875164847610335 1.6910202652747017 1.6362119907703792 1.4343673216401938 1.0856721896862966 0.9137433418080588 1.0 15.74152749184446 -7.293085281840269 2.893998495186401 0.9656923373147897 1.5200262048022135 0.6044313272387254 0.19121566016541344 0.20876115860467284 3.4633031526447775 0.13412489317897217 0.059028703341541505 5.092308642386034e-08 7.293085281840269 0.5543338674874239 HIFT(ph)AFDTYYR ddPTM_KYSE-520_SHP099_60min_R1 3 HIFTAFDTYYR 11 0 H0YJX4;Q9BUY7-6;Q9BUY7-3;Q9BUY7-2;Q9BUY7-5;Q9BUY7 H0YJX4 EFCAB11 EF-hand calcium-binding domain-containing protein 11 1 HIFT(0.801)AFDT(0.199)YYR;HIFT(0.499)AFDT(0.499)Y(0.001)YR;HIFT(0.5)AFDT(0.5)YYR 88.021 0.0043441 1871790000.0 1164260.0 1240130.0 983940.0 1445370.0 1332960.0 1449750.0 1073950.0 1925020.0 2353250.0 1445340.0 True False 1099676.1769052309 1180552.2933269208 1047366.346759664 1582737.530233665 1437856.3684950627 1440701.572492542 1182515.3467419525 1918342.5549230464 1925959.120604972 1432535.4120575064 0.767643276144776 0.8240999024459228 0.7311277179915323 1.1048505446440782 1.0037143629349545 1.0057004946379 0.8254702374467254 1.3391240026435298 1.3444408455067622 1.0 20.45013937194914 -5.669000136322076 0.5012861607066907 1.1891217369315514 0.703965478509591 0.4478418245011184 0.1544588968281592 1.3353807649704612 0.6300811197726014 0.13334634040020965 0.32763267448931277 2.1428899284814194e-06 5.669000136322076 -0.4851562584219604 HIGYDDSSK ddPTM_KYSE-520_SHP099_60min_R1 2 HIGYDDSSK 9 0 P31153;P31153-2 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 0 ; 150.35 0.00046191 1303790000.0 2460000.0 2757600.0 1724500.0 2111400.0 2495300.0 2500100.0 1826060.0 2052420.0 2145800.0 2107900.0 False True 2323538.8961115805 2625120.7567580105 1835664.0292975581 2312066.821184441 2691665.91368513 2484495.9485349916 2010655.9654281945 2045300.6340584292 1756176.8112160403 2089225.6459213835 1.1121531561933613 1.2565041798538177 0.8786336855864123 1.1066620906641134 1.2883557690093643 1.189194644142561 0.9623929178513705 0.9789754582284085 0.8405874275210407 1.0 20.99453688780451 -6.821133998584141 6.647780534720677 0.9414516354775314 1.1373181655275943 0.4203279107039489 0.11113236458095764 0.22658143773339648 19.508110254291786 0.04918865451054143 0.0332368321836651 1.509614301159789e-07 6.821133998584141 0.19586653005006294 HIISATSLST(ph)SPTELGSR ddPTM_KYSE-520_SHP099_60min_R1 1 HIISATSLSTSPTELGSR 18 0 Q5JSZ5;Q5JSZ5-5;A0A1W2PQP5 Q5JSZ5 PRRC2B Protein PRRC2B 1 HIISATSLS(0.033)T(0.583)S(0.383)PT(0.002)ELGSR 230.67 3.9459e-19 1229100000.0 333110.0 447720.0 497030.0 791250.0 340780.0 474710.0 327880.0 389810.0 522100.0 439010.0 True False 314631.7242616779 426210.8591585789 529069.3490761183 866450.1621020128 367597.44722703396 471747.1588052663 361025.3102004296 388457.84009233763 427299.80106994824 435120.7129446117 0.7230906617440863 0.9795232598197022 1.2159139598198483 1.9912868689666512 0.8448171651939423 1.0841753673659682 0.8297129956357329 0.8927587874718942 0.9820258800788024 1.0 18.731056169208195 HIISATSLSTS(ph)PTELGSR ddPTM_KYSE-520_SHP099_60min_R1 3 HIISATSLSTSPTELGSR 18 0 Q5JSZ5;Q5JSZ5-5;A0A1W2PQP5 Q5JSZ5 PRRC2B Protein PRRC2B 1 HIISATSLST(0.006)S(0.991)PT(0.003)ELGSR;HIISATSLST(0.054)S(0.945)PTELGSR;HIISATSLST(0.014)S(0.756)PT(0.229)ELGSR 241.28 8.3486e-24 6616300000.0 1418760.0 1921800.0 1596190.0 2885940.0 1364980.0 1312090.0 1324580.0 1456680.0 1730590.0 1349730.0 True False 1340058.5545720572 1829473.8433193902 1699082.9613943011 3160218.869910502 1472396.1603261845 1303900.7596149256 1458481.4730550335 1451627.1170716684 1416358.4806237142 1337772.442274049 1.0017088947460469 1.367552347101357 1.2700836911441147 2.362299274560117 1.1006327487381125 0.9746805349035703 1.090231362948241 1.0851076544857514 1.0587439506647922 1.0 20.351401300906616 -5.964279627237154 24.999993064566485 1.0487173830007586 1.5065937703693304 0.3116565870334531 0.32762985449974946 222.9846753974175 156061.71689815828 0.10393833285497564 0.11785461977722782 1.0857263367786523e-06 5.964279627237154 0.45787638736857184 HIKEEPLS(ph)EEEPCTSTAIAS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 10 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 HIKEEPLS(1)EEEPCT(0.176)S(0.176)T(0.176)AIAS(0.472)PEK;HIKEEPLS(0.997)EEEPCT(0.031)S(0.031)T(0.032)AIAS(0.908)PEK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEK;HIKEEPLS(0.898)EEEPCT(0.01)S(0.02)T(0.073)AIAS(1)PEK;HIKEEPLS(0.999)EEEPCTSTAIAS(1)PEK;HIKEEPLS(0.94)EEEPCT(0.036)S(0.018)T(0.006)AIAS(1)PEK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEK;HIKEEPLS(0.999)EEEPCT(0.001)STAIAS(1)PEK;HIKEEPLS(0.999)EEEPCT(0.183)S(0.281)T(0.12)AIAS(0.418)PEK;HIKEEPLS(0.631)EEEPCT(0.122)S(0.238)T(0.219)AIAS(0.79)PEK 258.55 1.7809e-37 42874830000.0 25182950.0 26238100.0 23874150.0 23687290.0 23083260.0 22846900.0 22497660.0 23242730.0 28930340.0 23510470.0 True False 23786001.562533777 24977582.29180897 25413115.908990584 25938522.919756554 24899781.236216612 22704304.02247273 24771943.02880258 23162106.394523975 23677319.53052282 23302185.526668876 1.0207626892040311 1.0718986965073571 1.0905893732545298 1.1131369154223942 1.0685599085853694 0.9743422562869959 1.0630738048348125 0.9939885839470043 1.0160986617939596 1.0 24.47396193671423 -6.1312813267545 7.009140589837359 1.0126511029611296 1.0769498048848158 0.5205033302871995 0.030363843017375405 0.21384438613929535 11.24061444273524 0.01010695569983001 0.010123897099802616 7.391263295893217e-07 6.1312813267545 0.06429870192368625 HIKEEPLS(ph)EEEPCTSTAIAS(ph)PEKK ddPTM_KYSE-520_SHP099_60min_R1 9 HIKEEPLSEEEPCTSTAIASPEKK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 HIKEEPLS(1)EEEPCT(0.002)S(0.002)T(0.001)AIAS(0.995)PEKK;HIKEEPLS(0.998)EEEPCT(0.002)STAIAS(1)PEKK;HIKEEPLS(0.997)EEEPCT(0.021)S(0.019)T(0.018)AIAS(0.945)PEKK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEKK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEKK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEKK;HIKEEPLS(1)EEEPCT(0.166)S(0.147)T(0.131)AIAS(0.556)PEKK;HIKEEPLS(1)EEEPCTSTAIAS(1)PEKK;HIKEEPLS(0.998)EEEPCT(0.131)S(0.095)T(0.069)AIAS(0.707)PEKK 236.62 1.8493e-28 48171800000.0 14385190.0 14658820.0 13288930.0 13358510.0 13028250.0 12846750.0 12896090.0 13704280.0 16985870.0 13730430.0 True False 13587214.834534667 13954588.283862613 14145555.690839782 14628098.774017528 14053499.154397573 12766568.667990051 14199752.630909644 13656743.051282989 13901664.186937349 13608789.072312912 0.9984146835061073 1.025409991271981 1.0394426436970003 1.0749008377077724 1.0326781523118338 0.9381120245271228 1.0434251391109477 1.0035237506228705 1.0215210268208428 1.0 23.69803536389019 -6.0353221932636805 24.997698801321647 1.0020824941168363 1.0366835391275455 0.2247145451973449 0.030406378592535754 930.764530963169 658705.7515595093 0.0101588938628225 0.010162842495724782 9.218872460781444e-07 6.0353221932636805 0.034601045010709264 HIKEEPLS(ph)EEEPCTSTAIASPEK ddPTM_KYSE-520_SHP099_60min_R1 13 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLS(1)EEEPCTSTAIASPEK;HIKEEPLS(1)EEEPCTSTAIASPEK;HIKEEPLS(0.91)EEEPCT(0.036)S(0.053)T(0.002)AIASPEK;HIKEEPLS(1)EEEPCTSTAIASPEK;HIKEEPLS(1)EEEPCTSTAIASPEK;HIKEEPLS(0.999)EEEPCT(0.001)STAIASPEK;HIKEEPLS(1)EEEPCTSTAIASPEK;HIKEEPLS(0.996)EEEPCT(0.003)S(0.001)TAIASPEK;HIKEEPLS(0.999)EEEPCT(0.001)STAIASPEK;HIKEEPLS(1)EEEPCTSTAIASPEK;HIKEEPLS(0.883)EEEPCT(0.041)S(0.041)T(0.036)AIASPEK;HIKEEPLS(0.998)EEEPCT(0.001)S(0.001)T(0.001)AIASPEK;HIKEEPLS(0.464)EEEPCT(0.179)S(0.179)T(0.179)AIASPEK 259.47 1.7047999999999998e-37 37322660000.0 15573867.0 14178134.0 13402912.0 13788934.0 13741653.0 12698023.0 13535604.0 14056496.0 17889627.0 13014071.0 True False 14709953.55177583 13496995.160826983 14266885.15293743 15099430.14156582 14823042.91178976 12618769.92836452 14903914.947084818 14007737.29618683 14641321.69759733 12898776.455734042 1.1404146433777944 1.0463779419037074 1.1060649978622745 1.1706094910152114 1.149182092011549 0.9782920086776876 1.155451836709629 1.0859741111305026 1.1350938399346129 1.0 23.620730886064457 HIKEEPLS(ph)EEEPCTSTAIASPEKK ddPTM_KYSE-520_SHP099_60min_R1 3 HIKEEPLSEEEPCTSTAIASPEKK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLS(0.999)EEEPCTSTAIASPEKK;HIKEEPLS(1)EEEPCTSTAIASPEKK;HIKEEPLS(1)EEEPCTSTAIASPEKK 123.24 9.1548e-05 10809800000.0 4883400.0 4530150.0 3858700.0 3704290.0 4043770.0 4036760.0 3737500.0 4049090.0 5346400.0 3502010.0 True False 4612508.06718345 4312514.794106221 4107437.9761382965 4056344.6078646 4361991.69309602 4011565.083479905 4115322.9744848814 4035044.6518547116 4375628.531776226 3470984.915922552 1.3288758605732784 1.242446999502445 1.1833638219792095 1.1686436864812666 1.25670142589388 1.1557425862260402 1.1856355110062675 1.1625071124177555 1.260630235442331 1.0 21.726913664893782 -13.999999999999998 0.1700113391779169 0.20796883396855695 1.2594468525996176 0.6182011827357055 0.05163247777023241 92.65834858378919 0.8734226609067247 24.925773201863535 0.1903247997576045 1.0000000000000041e-14 13.999999999999998 1.0514780186310606 HIKEEPLSEEEPCT(ph)STAIAS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 1 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 HIKEEPLS(0.106)EEEPCT(0.679)S(0.143)T(0.071)AIAS(1)PEK 157.2 6.3602e-08 2268600000.0 2501200.0 2855400.0 2491500.0 2323700.0 2391100.0 2263600.0 2251700.0 2746400.0 3156000.0 2551400.0 True False 2362453.4499814133 2718222.2979572206 2652106.0765409493 2544543.749354118 2579265.966502024 2249472.0327602113 2479323.8104742784 2736873.3794145784 2582949.956285684 2528796.580959166 0.934220438199636 1.0749074553581555 1.0487621252378523 1.006227139230384 1.0199578668853289 0.8895425000562885 0.9804362395704748 1.0822829325308916 1.0214146822778358 1.0 21.270019559095314 -11.32526177612619 1.9236788297495826 0.9657968412568382 1.008099125357886 0.00035945311932472634 0.056763084581097585 61841247.11047936 7755297.1629935885 9171032.999353722 0.015767506792148726 4.7286614738999554e-12 11.32526177612619 0.04230228410104775 HIKEEPLSEEEPCT(ph)STAIASPEK ddPTM_KYSE-520_SHP099_60min_R1 1 HIKEEPLSEEEPCTSTAIASPEK 23 1 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 HIKEEPLS(0.328)EEEPCT(0.515)S(0.117)T(0.039)AIASPEK 136.16 3.2355e-06 600360000.0 224880.0 250900.0 237310.0 233120.0 252650.0 253510.0 212600.0 259910.0 314320.0 270670.0 True False 212405.4581128339 238846.38739142212 252607.3823094252 255275.65470991615 272532.11761814135 251927.75005523994 234091.68277605018 259008.4328734501 257247.41136239446 268272.07437807333 0.7917538886790463 0.8903140140289747 0.9416089352387381 0.9515550781858814 1.0158795627533874 0.9390755658757106 0.8725905717870096 0.9654692292289504 0.958904917549704 1.0 18.033337360369273 -4.321323513717065 1.69341829080108 0.9541196225882853 0.7469519072948251 0.6667452943060448 0.036032628602889555 0.5363349225787353 1.6705170097371758 0.01057001172060483 0.174086789920586 4.771736860302063e-05 4.321323513717065 -0.20716771529346023 HILANFK ddPTM_KYSE-520_SHP099_60min_R1 4 HILANFK 7 0 Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;P13693-2;E9PJF7;H0YCX0;Q56UQ5 Q5W0H4 TPT1 Translationally-controlled tumor protein;TPT1-like protein 0 ;;; 144.29 0.0026024 2401350000.0 6634620.0 6192860.0 4228190.0 4202190.0 6601080.0 6678980.0 4868710.0 5296120.0 4885370.0 4967320.0 False True 6266584.402812926 5895345.709927635 4500745.892743196 4601564.87416551 7120547.440992517 6637294.00837817 5360886.720830589 5277748.995843705 3998309.9581557065 4923313.409316486 1.272838814395716 1.1974345770415007 0.914170096144264 0.93464796806514 1.4462917244955726 1.348135586050298 1.088877809543076 1.071991270321429 0.8121176991474123 1.0 22.231198151203415 -7.467969247033379 2.638266355631832 0.9107589746579788 1.1719902717792396 0.2883841762212954 0.16352403969083404 0.4154700329470309 5.473400702780891 0.1367502188858751 0.04919220860446427 3.404322953085709e-08 7.467969247033379 0.2612312971212608 HIMDRT(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 6 HIMDRTPEK 9 1 O75815;O75815-3 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 HIMDRT(1)PEK;HIMDRT(1)PEK;HIMDRT(1)PEK;HIMDRT(1)PEK;HIMDRT(1)PEK;HIMDRT(1)PEK 128.21 0.0011244999999999998 7232850000.0 17454490.0 17321700.0 15755030.0 16304190.0 16776940.0 16147120.0 15064250.0 15148290.0 18737200.0 15432200.0 True False 16486254.645036839 16489539.531598216 16770624.442739304 17853735.315566536 18097189.730269134 16046339.834609943 16587091.402912095 15095744.117627472 15334996.806373915 15295482.714069925 1.077851216154921 1.0780659780308801 1.0964429666095097 1.167255434125223 1.183172186754328 1.0490901225267852 1.0844438003681998 0.986941334237283 1.0025833831493034 1.0 23.86660230220969 -7.006799009824406 1.6457433567925024 0.9936009939056255 1.1160255761521833 0.6323142249470984 0.038357592786239784 0.2719789970869498 1.4337224548190484 0.02743675016729931 0.013383858798993589 9.84466608525815e-08 7.006799009824406 0.12242458224655783 HIMGQNVADYMR ddPTM_KYSE-520_SHP099_60min_R1 2 HIMGQNVADYMR 12 0 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 0 ; 112.64 0.00028876 968800000.0 1880650.0 1272840.0 1156190.0 945450.0 1435920.0 1283190.0 1060190.0 1421530.0 1390410.0 1331030.0 False True 1776326.5955171701 1211690.8558282105 1230719.857369408 1035305.2837400914 1548918.7347327948 1275181.1352348393 1167364.3516572914 1416599.0442175963 1137946.5933837693 1319238.1097256707 1.3464791400595217 0.9184777538606551 0.9329019896380423 0.7847751487071415 1.1741009627556054 0.9666042284815493 0.8848776752667032 1.0738008808070072 0.8625786239759249 1.0 20.331273549923907 -4.257996795999529 24.75452663303997 0.9566066415558347 1.3464793091319727 0.5591393652861187 0.10418700026536547 215.10967404051516 1546706.704978095 0.025272495797907312 0.1783317122827598 5.520815122381035e-05 4.257996795999529 0.3898726675761379 HIQSNLDFS(ph)PVNSASSEENVK ddPTM_KYSE-520_SHP099_60min_R1 3 HIQSNLDFSPVNSASSEENVK 21 0 E7EPP6;O14757-2;O14757-3;O14757 E7EPP6 CHEK1 Serine/threonine-protein kinase Chk1 1 HIQS(0.002)NLDFS(0.965)PVNS(0.034)ASSEENVK;HIQS(0.01)NLDFS(0.99)PVNSASSEENVK;HIQSNLDFS(0.999)PVNSASSEENVK 186.24 2.8502e-13 1097170000.0 810870.0 1029000.0 813240.0 1097660.0 784900.0 898790.0 757700.0 948090.0 1066580.0 938760.0 True False 765889.4246707304 979565.2954395113 865662.7516300068 1201981.2763764882 846667.1645298979 893180.3182207785 834295.7104393838 944801.2970758701 872915.9582937851 930443.3167442284 0.8231446353451184 1.0527941657608642 0.9303766667475251 1.2918371863666183 0.909961036092476 0.9599513502296527 0.8966647354281821 1.0154313326489168 0.9381720977353668 1.0 19.827558737410225 HIS(ph)DLYEDLR ddPTM_KYSE-520_SHP099_60min_R1 2 HISDLYEDLR 10 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;E9PKG0;E9PIA2;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 HIS(1)DLYEDLR;HIS(1)DLYEDLR 168.61 3.3556e-05 169603000.0 122947.0 115397.0 103806.0 113504.0 120871.0 119818.0 119250.0 114871.0 130885.0 125210.0 True False 116126.88482123175 109853.15490557179 110497.50085547243 124291.38603377815 130382.86003808571 119070.17141776947 131304.95376784547 114472.53931209298 107119.5833423484 124100.73681190584 0.9357469407876304 0.8851934140574161 0.8903855343175662 1.001536245688543 1.0506211597736235 0.9594638555469579 1.0580513632796456 0.9224162744947606 0.8631663767210742 1.0 16.921152155511262 -5.257693943134758 24.829463089646158 0.981513270513752 0.9019171041093491 0.2786159373081041 0.05560431272601965 394.6580162920699 2616275.4274519524 0.016130731982357975 0.026584179720255403 5.524666375065689e-06 5.257693943134758 -0.07959616640440292 HITKDPSDR ddPTM_KYSE-520_SHP099_60min_R1 1 HITKDPSDR 9 1 Q6BCY4-2;Q6BCY4 Q6BCY4-2 CYB5R2 NADH-cytochrome b5 reductase 2 0 56.563 0.04994 288890000.0 165950.0 179640.0 120390.0 110380.0 181780.0 188010.0 132700.0 165690.0 155660.0 147320.0 False True 156744.42268687655 171009.8247548626 128150.53203081054 120870.482013043 196085.0518132817 186836.5598512314 146114.61102719564 165115.26006233675 127396.06786927427 146014.85941322581 1.0734826805762678 1.1711809704990395 0.8776540452512523 0.8277957633817009 1.3429116228393985 1.2795722339633882 1.0006831607027578 1.1308113484193845 0.8724870083854966 1.0 17.155755668959365 -7.756801045024232 24.996590413560725 0.9362434903628429 1.0870691142760198 0.13388898473216215 0.15438759981173486 237.20572406773056 1278386.7850972093 0.12055032827935115 0.04215525986590294 1.7506484958677237e-08 7.756801045024232 0.1508256239131769 HIVS(ph)NDS(ph)SDS(ph)DDESHEPK ddPTM_KYSE-520_SHP099_60min_R1 1 HIVSNDSSDSDDESHEPK 18 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 3 HIVS(0.669)NDS(0.673)S(0.674)DS(0.975)DDES(0.01)HEPK 46.89 0.047812 242090000.0 481480.0 477860.0 426800.0 487580.0 479210.0 461400.0 436100.0 431180.0 583390.0 485130.0 True False 454771.34459341585 454902.8883175166 454312.21090414503 533919.4566037271 516921.1006680761 458520.2314523599 480185.2439258487 429684.3372181681 477461.08206511557 480832.12562542886 0.9458006658808099 0.9460742410374816 0.944845792724875 1.1104072048206979 1.0750552492633587 0.9535973305775952 0.9986546620637322 0.8936265160304508 0.9929891465635152 1.0 18.875173763855628 -9.796624837092361 13.796846682772753 1.0000130034292367 0.9854533359825218 0.005414122434561408 0.061718737591508685 0.0 0.0 0.06479776240858202 0.015715765806721245 1.597258334306208e-10 9.796624837092361 -0.014559667446714886 HIVSNDSS(ph)DS(ph)DDESHEPK ddPTM_KYSE-520_SHP099_60min_R1 2 HIVSNDSSDSDDESHEPK 18 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 2 HIVS(0.207)NDS(0.359)S(0.434)DS(0.993)DDES(0.007)HEPK;HIVS(0.1)NDS(0.123)S(0.778)DS(0.998)DDESHEPK 96.016 0.00049492 316480000.0 1163370.0 1192600.0 1192340.0 1226080.0 1193220.0 1179700.0 1091190.0 1104690.0 1377580.0 1132000.0 True False 1098835.5469794015 1135305.705870904 1269200.1442114515 1342606.2745656061 1287119.6255068986 1172337.0547125032 1201498.1341881375 1100858.0882265845 1127446.1979657905 1121971.3606826733 0.97937931883645 1.0118847464877512 1.1312232991751194 1.196649327794504 1.1471947240469127 1.0448903562023049 1.0708812865393245 0.981181986282393 1.0048796586748756 1.0 20.097604419666233 -7.042096290639867 1.9197626376302492 0.993522333149205 1.0934230826861808 0.2958458099086837 0.06123953973320192 0.4918858008718741 3.5349870582103136 0.043277174926890115 0.021410680844972274 9.076192728898192e-08 7.042096290639867 0.09990074953697581 HIVSNDSSDS(ph)DDESHEPK ddPTM_KYSE-520_SHP099_60min_R1 5 HIVSNDSSDSDDESHEPK 18 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 HIVS(0.002)NDS(0.006)S(0.006)DS(0.985)DDESHEPK;HIVSNDS(0.006)S(0.006)DS(0.988)DDESHEPK;HIVSNDSSDS(1)DDESHEPK;HIVSNDSSDS(1)DDESHEPK;HIVSNDSSDS(1)DDESHEPK 324.88 2.8385e-48 6340910000.0 6529820.0 6286270.0 5596930.0 8314490.0 6370400.0 6323930.0 5760790.0 5861700.0 7710120.0 5485640.0 True False 6167597.867726546 5984268.153316353 5957717.063204631 9104696.629757427 6871714.237382169 6284460.007127276 6343146.873092388 5841367.1308310665 6310156.5643084245 5437041.497363339 1.134366524647179 1.100647871865313 1.095764500987125 1.674568169871923 1.2638701103742846 1.1558602247518044 1.1666541217624435 1.0743650078197495 1.1605864268956743 1.0 22.374390408645002 -6.635399839286577 2.150750597914658 1.0986903899668927 1.25604918970287 0.17014044356045133 0.1608395889685615 0.6653210102324607 6.271962072246662 0.08054340912730724 0.057316085429917854 2.3152620900210027e-07 6.635399839286577 0.15735879973597733 HIYDTK ddPTM_KYSE-520_SHP099_60min_R1 5 HIYDTK 6 0 A0A087X1X5;B4DDF4;B4DUT8;Q99439-2;Q99439 A0A087X1X5 CNN2 Calponin;Calponin-2 0 ;;;; 153.67 0.011526 5872980000.0 8505680.0 7847240.0 5309950.0 5133190.0 7721270.0 7905980.0 5855490.0 7140110.0 6802300.0 6453340.0 False True 8033852.9747472815 7470246.811452614 5652237.87322039 5621046.83425015 8328890.020983277 7856635.846245616 6447420.073275321 7115342.624924204 5567173.792028555 6396168.428222554 1.2560414981098031 1.1679252814060963 0.883691218680291 0.8788146993515298 1.3021686521312903 1.2283347342103865 1.0080128667072967 1.112438283133439 0.8703919939731214 1.0 22.608776498661822 -7.750041770600509 24.8614355763293 0.935196001823869 1.0993743256991757 0.18680843391162105 0.14109664669904157 332.9086553314953 726179.9723246942 0.10443095905516595 0.038696267964411904 1.7781083827062927e-08 7.750041770600509 0.16417832387530673 HIYYITGETK ddPTM_KYSE-520_SHP099_60min_R1 4 HIYYITGETK 10 0 P07900;P07900-2;Q58FG0 P07900 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 ;;; 185.61 6.951e-06 11361750000.0 12059400.0 10256400.0 7244510.0 6987320.0 11511700.0 10650700.0 8183510.0 8830700.0 8830500.0 8166570.0 False True 11390441.04218209 9763667.148829728 7711502.70622584 7651392.79198563 12417605.297386715 10584225.030623443 9010779.054161029 8800068.362800868 7227103.798789836 8094220.543295326 1.4072313672768797 1.206251682494277 0.952717147374184 0.9452908715618699 1.534132314651665 1.3076274576420652 1.113236167208826 1.087203927262671 0.8928721129023661 1.0 22.94846072799098 -7.375750563752747 2.141318322928211 0.9543929695864473 1.210146234090698 0.26870786782262956 0.17445747327928923 0.5217828069748492 4.427385066695564 0.1452961564321447 0.05409796380779939 4.209683413667219e-08 7.375750563752747 0.25575326450425084 HKDS(ph)LNMWLCPR ddPTM_KYSE-520_SHP099_60min_R1 2 HKDSLNMWLCPR 12 1 B4DF87;B4DZ85;Q13772;Q13772-3;Q13772-4 B4DF87 NCOA4 Nuclear receptor coactivator 4 1 HKDS(1)LNMWLCPR;HKDS(1)LNMWLCPR 158.29 3.0298e-06 1443920000.0 522130.0 470090.0 480260.0 509320.0 547510.0 525040.0 482270.0 579010.0 578450.0 511280.0 True False 493166.4080596501 447506.17078052426 511218.3280431689 557725.6196673582 590595.9220942345 521763.0306063009 531022.5581016262 577001.5494519505 473418.06153785024 506750.4569698205 0.9731938102406499 0.883089821874942 1.0088167085236877 1.1005922382435533 1.1654571080720455 1.0296251802637733 1.0478975416755298 1.1386305458947297 0.9342232553054108 1.0 18.95091595910145 -4.974323124727802 4.983467039970926 1.06737465675604 0.9295724891925562 0.37771591089553325 0.06635267516183062 0.16822784983901343 11.040363609108665 0.01726574702576704 0.03598551973651834 1.0609059259422698e-05 4.974323124727802 -0.13780216756348385 HKEDKDDRR ddPTM_KYSE-520_SHP099_60min_R1 7 HKEDKDDRR 9 3 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 0 ;;;;;; 72.006 0.010556999999999999 4367620000.0 8484370.0 5908690.0 3496590.0 2721470.0 8228970.0 16049360.0 7296970.0 3824210.0 3793920.0 5067200.0 False True 8013725.082927727 5624827.663275492 3721985.786141807 2980117.6905602072 8876543.12256543 15949189.9910322 8034618.939164403 3810944.7080873223 3105039.764940235 5022308.550221948 1.5956257969402499 1.1199685576918443 0.7410906257396956 0.5933760661575659 1.767422896025206 3.175669083558669 1.5997860065386333 0.7588033809509588 0.6182495029707037 1.0 22.25991923397518 -4.229112123299105 20.18624385928199 1.304976573184471 1.5956318441647552 0.014956605164968106 0.743084136717478 6478.556109661323 4044501.466572067 0.20717174083802398 16.805392748097358 5.9004872559819665e-05 4.229112123299105 0.2906552709802843 HKEDVYENLHTK ddPTM_KYSE-520_SHP099_60min_R1 1 HKEDVYENLHTK 12 1 P29350-2;P29350;P29350-3 P29350-2 PTPN6 Tyrosine-protein phosphatase non-receptor type 6 0 119.25 0.00048865 338890000.0 507710.0 452920.0 321330.0 333750.0 450370.0 406660.0 403280.0 437630.0 424740.0 288230.0 False True 479546.3142052073 431161.04335322045 342043.44594617817 365469.49965440313 485811.55674522935 404121.88409713196 444047.4780335161 436111.96367360966 347617.9228240749 285676.5064395469 1.6786340612390749 1.5092632177804237 1.1973103781236534 1.2793124090228314 1.7005653100425107 1.4146136451113798 1.554371703742053 1.526593730471487 1.216823627383709 1.0 18.124022870750245 -7.969326415625335 3.566608343943284 1.0020085148639857 1.4739155227679035 0.5237722606873633 0.14938340559304877 0.16790691553071962 4.916434031094415 0.15126827578161856 0.040064934804838366 1.0731825054376872e-08 7.969326415625335 0.4719070079039178 HKEEDKNSER ddPTM_KYSE-520_SHP099_60min_R1 6 HKEEDKNSER 10 2 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 0 ;;;;; 251.34 5.9986e-14 3060320000.0 1412916.0 1796500.0 603648.0 474158.0 2175020.0 4803290.0 1516647.0 680876.0 787619.0 3649940.0 False True 1334538.732901784 1710193.4433985227 642560.1159509493 519221.83375919954 2346181.69982905 4773310.885420046 1669964.479808314 678514.2000736522 644607.2438592447 3617604.3712103507 0.3689012384887417 0.47274197726224526 0.17762033932305493 0.14352642812223335 0.6485456835745923 1.3194673589536348 0.46162164472661504 0.18755898391582274 0.17818621875547352 1.0 21.78660320975925 -5.775276217028526 24.858855390897904 0.6177394484256181 0.29562373478330584 0.20005485908781295 0.3340551176323406 428.4307241394813 769703.2019814738 0.11366989522323108 0.12955379176215792 1.6777366160630359e-06 5.775276217028526 -0.3221157136423123 HKELAPYDENWFYTR ddPTM_KYSE-520_SHP099_60min_R1 5 HKELAPYDENWFYTR 15 1 P39019;M0R2L9;M0QYF7;M0R140 P39019 RPS19 40S ribosomal protein S19 0 ;;;; 280.36 2.8082000000000003e-26 3996300000.0 4166850.0 4311120.0 3169000.0 2677350.0 3992980.0 3401660.0 2766350.0 2532250.0 3599230.0 2485280.0 False True 3935706.52409046 4104007.3240769496 3373278.810579278 2931804.5390253672 4307204.809051588 3380428.9781582914 3045999.6549742534 2523466.215781596 2945700.5612047263 2463262.35271858 1.5977618136155154 1.66608616396364 1.3694354589783577 1.1902120518302406 1.7485773711021648 1.3723381816912357 1.2365713508398872 1.0244407027926083 1.1958533600587462 1.0 21.23213886131424 -6.817834538417528 2.3737834539889398 1.0863790823955017 1.499991202065292 0.601589586381486 0.15598509460664545 0.22189712710620083 2.5484979228718987 0.07926316608118004 0.05021820340011525 1.521126952552826e-07 6.817834538417528 0.41361211966979017 HKELFDELVKK ddPTM_KYSE-520_SHP099_60min_R1 1 HKELFDELVKK 11 2 A0A5F9ZH72;A0A5F9ZH31;A0A5K1VW54;A0A5K1VW94;P55263-3;P55263-2;P55263;A0A5F9ZH83 A0A5F9ZH72 ADK Adenosine kinase 0 171.05 1.685e-05 502930000.0 1357200.0 1137400.0 990090.0 719140.0 1060600.0 910050.0 712020.0 723960.0 1095800.0 624590.0 False True 1281913.410488877 1082757.596727793 1053912.785600011 787486.8493826751 1144063.1860114785 904370.0403840938 783997.9302455456 721448.7517335338 896830.3428700428 619056.6185236664 2.0707530977473425 1.7490445370085312 1.7024497502561151 1.2720756483642532 1.8480752031047727 1.4608842120787695 1.2664397839978405 1.1654002721981285 1.4487048777683929 1.0 19.239711837879344 -1.0000000000002582 0.1595482845168748 0.9609273226023194 4.927394533693801 0.6960810517598961 0.17628446613800625 37.13743401543349 0.3832854878264136 0.5403673628631673 34.6034123247895 0.09999999999994054 1.0000000000002582 3.9664672110914814 HKENLQHTQAEEEAHLLTQQR ddPTM_KYSE-520_SHP099_60min_R1 1 HKENLQHTQAEEEAHLLTQQR 21 1 Q9H2K8;G3V1Q8 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 0 313.38 3.8521999999999997e-53 452920000.0 252110.0 202940.0 213320.0 172350.0 190840.0 206720.0 154160.0 233870.0 220440.0 137710.0 False True 238124.95573117497 193190.4577808496 227070.94852406761 188730.09218108281 205858.02226893321 205429.78380110927 169743.99725661267 233058.7595556684 180413.65284018283 136489.99653675864 1.7446330263994447 1.4154184385873343 1.663645353400784 1.382739372626881 1.5082279104131475 1.5050904023269147 1.2436369079319176 1.7075153159147634 1.3218086117512278 1.0 17.05843569315951 -12.235498047470832 0.1978962342236819 3.5408262697856277e-11 1.5964115075702596 0.5369569979787694 0.14790317460544064 49.365115402020166 0.9129364690096847 20.903261246451876 0.3685931374806658 5.814360463602828e-13 12.235498047470832 1.5964115075348513 HKEQNNDSQLK ddPTM_KYSE-520_SHP099_60min_R1 1 HKEQNNDSQLK 11 1 O95347;O95347-2 O95347 SMC2 Structural maintenance of chromosomes protein 2 0 99.215 0.0017122 611020000.0 584450.0 566970.0 267390.0 343020.0 612010.0 507770.0 357910.0 462240.0 427590.0 451920.0 False True 552029.3934278094 539731.9101606804 284626.387239127 375620.51766727644 660171.7051394361 504600.8190822816 394091.03566498595 460636.5973276272 349950.43466672866 447916.34038844024 1.2324386133113174 1.2049837469484062 0.6354454204378757 0.8385952549566116 1.4738727874203574 1.1265514864777733 0.8798317902919637 1.0283987338531917 0.7812852604645903 1.0 18.772869772395012 -6.76255642963391 24.997493026444886 0.924745495875079 1.076752692860595 0.11405253187962894 0.22166235987264526 83.97478508423896 1879115.8018181287 0.0967329565512519 0.06937934516236216 1.7276014916931204e-07 6.76255642963391 0.152007196985516 HKETNNSNAQNPS(ph)EEEGEGQDEDILPLTLEEK ddPTM_KYSE-520_SHP099_60min_R1 1 HKETNNSNAQNPSEEEGEGQDEDILPLTLEEK 32 1 O43422-2;O43422 O43422-2 PRKRIR 52 kDa repressor of the inhibitor of the protein kinase 1 HKET(0.064)NNS(0.064)NAQNPS(0.872)EEEGEGQDEDILPLTLEEK 54.732 0.042565 390380000.0 31305.0 43028.0 34436.0 51330.0 38950.0 39782.0 32757.0 37078.0 41112.0 38547.0 True False 29568.449245029664 40960.87029365526 36655.799659548094 56208.38776707274 42015.14340481534 39533.70578161636 36068.39723751209 36949.385072070276 33647.097149181594 38205.50356911219 0.7739316716907435 1.0721196285126493 0.9594376787427826 1.471211802388472 1.0997144254050117 1.034764682792402 0.9440628670753112 0.9671220536389569 0.8806871787022876 1.0 15.221492855505618 -6.6119675809362 3.206217130879035 0.9445215726707568 1.0893914507101512 0.11474766137244619 0.16444338406131837 0.5481009186555329 11.286042987605413 0.07110815362785473 0.05352295819850339 2.4436129558579807e-07 6.6119675809362 0.14486987803939444 HKFQSQADQDQQASGLQS(ph)PPSR ddPTM_KYSE-520_SHP099_60min_R1 1 HKFQSQADQDQQASGLQSPPSR 22 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 HKFQSQADQDQQASGLQS(0.989)PPS(0.011)R 143.72 6.0074e-07 635810000.0 310090.0 393220.0 329090.0 411870.0 306600.0 308770.0 251050.0 276720.0 392500.0 247830.0 True False 292888.68955091026 374329.1209647471 350303.6679626171 451014.0009667689 330727.67568463116 306842.8518975842 276428.5840118879 275760.1229069336 321231.8941198131 245634.41900882247 1.1923764215648889 1.5239278048867504 1.4261180064917338 1.8361189070598847 1.346422366292048 1.2491850821873758 1.1253658389053343 1.1226444731144503 1.3077641782289289 1.0 17.90615320393235 -6.209279700216578 2.944392484110717 1.1588509368273938 1.4977630490516367 0.4695558782394751 0.16610031679476545 0.24196875529339126 4.171650952655209 0.060067148115328275 0.057834459729937976 6.176185049854387e-07 6.209279700216578 0.3389121122242429 HKGYS(ph)PPESR ddPTM_KYSE-520_SHP099_60min_R1 6 HKGYSPPESR 10 1 Q14669-3;G5E9G6;C9JLD7 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 HKGYS(1)PPESR;HKGYS(0.996)PPES(0.004)R;HKGYS(0.978)PPES(0.022)R;HKGYS(0.999)PPES(0.001)R;HKGYS(0.997)PPES(0.003)R;HKGY(0.002)S(0.958)PPES(0.039)R 91.62 0.002245 6001570000.0 3974380.0 3864890.0 3808800.0 3591940.0 3544870.0 3486540.0 3409320.0 3479680.0 4423390.0 3150240.0 True False 3753913.2186698904 3679214.883081842 4054321.3422954725 3933316.8976438628 3823831.101448721 3464779.210593657 3753967.3373567406 3467609.80224342 3620213.880587624 3122331.32444963 1.2022789475526237 1.178355049725664 1.2984917105202227 1.2597371927968548 1.2246717929983755 1.1096769850984312 1.202296280334198 1.1105835486099964 1.159458591802635 1.0 21.57419220554395 -8.072386215514761 0.38685280225524693 0.986736796401459 1.2413956002268363 0.6715100293078107 0.04644895668811459 0.9514962978729342 0.37063649588711256 0.08435803209750184 0.042724838139995565 8.46474314723941e-09 8.072386215514761 0.2546588038253773 HKHEIESGR ddPTM_KYSE-520_SHP099_60min_R1 6 HKHEIESGR 9 1 O00178;F5H716 O00178 GTPBP1 GTP-binding protein 1 0 ;;;;; 169.65 8.692799999999999e-05 1316400000.0 1037047.0 2317450.0 1666350.0 2820300.0 1417720.0 2109530.0 1652870.0 2125920.0 1304220.0 954928.0 False True 979519.935608059 2206116.2234366317 1773765.5872542665 3088340.4640458836 1529286.4982766306 2096363.6407795772 1819958.2300566756 2118545.6797134597 1067406.5247106822 946468.0808427415 1.0349212566533548 2.330893421648505 1.8740891776032147 3.2630159712264195 1.6157824328475439 2.21493326950124 1.9228944608846952 2.2383699171630727 1.1277786819395497 1.0 19.85219432702572 -7.772535576194566 16.418485277956968 1.063773656165902 2.0902100667875634 0.35429449187349094 0.5378189253475352 3.940363480103713 5812.385655763727 0.46260657462066895 0.12917437071117377 1.688357548273055e-08 7.772535576194566 1.0264364106216615 HKHS(ph)S(ph)EEDKDKK ddPTM_KYSE-520_SHP099_60min_R1 6 HKHSSEEDKDKK 12 3 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 HKHS(1)S(1)EEDKDKK;HKHS(1)S(1)EEDKDKK;HKHS(1)S(1)EEDKDKK;HKHS(1)S(1)EEDKDKK;HKHS(1)S(1)EEDKDKK;HKHS(1)S(1)EEDKDKK 107.5 0.00049615 7147000000.0 2577870.0 2530171.0 2461552.0 2741780.0 3019360.0 4544740.0 2791180.0 2064919.0 2756044.0 2104829.0 True False 2434870.4122435604 2408617.7872959035 2620227.5805424517 3002357.9468537825 3256966.454191612 4516374.591874299 3073339.713691697 2057756.2779447183 2255615.8838154045 2086181.852592181 1.1671419772049676 1.1545579232716843 1.2559919343976143 1.439164060948574 1.561209273364484 2.1648997599430206 1.4731887873882734 0.9863743543679365 1.0812172874635515 1.0 20.99243349247318 -7.258491830120077 23.85984132035866 1.0253468322246022 1.4701647965066942 0.35261305339994087 0.2710164831168801 172.80912999669846 1398880.7698419571 0.15300148447230003 0.0832764099216736 5.514525761238511e-08 7.258491830120077 0.44481796428209197 HKLDVTSVEDYK ddPTM_KYSE-520_SHP099_60min_R1 2 HKLDVTSVEDYK 12 1 B7ZAR1;E9PCA1;P48643;E7ENZ3;P48643-2 B7ZAR1 CCT5 T-complex protein 1 subunit epsilon 0 ; 128.76 8.453700000000001e-05 2124800000.0 3134500.0 3128600.0 2072910.0 2127800.0 2785700.0 2788900.0 2225900.0 2654600.0 2687300.0 2449000.0 False True 2960623.036529163 2978297.359875656 2206533.095373269 2330025.4722536006 3004918.7415351514 2771493.4406100754 2450915.6946905428 2645391.8121882966 2199354.0613201903 2427303.76529317 1.2197167403856346 1.2269982037109957 0.9090469544534998 0.9599233130889901 1.2379656738892821 1.1417991766165838 1.009727636785716 1.0898478591816405 0.9060893377943374 1.0 21.21092323539833 -4.729336483116966 24.670131343129476 1.042945126456957 1.2233579364840714 0.3741857797455641 0.09824971677153199 196.58791757916842 151068.89176157682 0.02635866947487815 0.0697250461362746 1.8649342153301037e-05 4.729336483116966 0.1804128100271145 HKLTVS(ph)DGES(ph)GEEK ddPTM_KYSE-520_SHP099_60min_R1 1 HKLTVSDGESGEEK 14 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6 P46100-2 ATRX Transcriptional regulator ATRX 2 HKLT(0.001)VS(0.999)DGES(1)GEEK 124.08 5.0571e-05 1105100000.0 1739900.0 1601400.0 1422700.0 1482300.0 1567900.0 1632000.0 1446000.0 1554800.0 1878000.0 1543400.0 True False 1643384.2785953383 1524466.3402495957 1514409.518400483 1623177.3463302527 1691284.809869319 1621814.0826403373 1592175.79160004 1549406.761693047 1537002.5405274127 1529726.6767470294 1.0742992873014428 0.9965612572641932 0.9899869966449704 1.0610897822491705 1.1056124179424285 1.0601986010266435 1.0408237077919102 1.0128650988736545 1.0047563162040525 1.0 20.54484247235505 -7.306883488357937 2.993233020417213 1.0038721045831684 1.0465129198217975 0.2593037229070494 0.0322158931752601 0.4589900050688233 8.137393570069696 0.023133714630468392 0.010120040117364847 4.933061293712073e-08 7.306883488357937 0.04264081523862906 HKLTVS(ph)DGES(ph)GEEKK ddPTM_KYSE-520_SHP099_60min_R1 8 HKLTVSDGESGEEKK 15 2 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6 P46100-2 ATRX Transcriptional regulator ATRX 2 HKLT(0.008)VS(0.992)DGES(1)GEEKK;HKLT(0.051)VS(0.95)DGES(1)GEEKK;HKLT(0.014)VS(0.987)DGES(1)GEEKK;HKLT(0.123)VS(0.878)DGES(1)GEEKK;HKLT(0.014)VS(0.989)DGES(0.998)GEEKK;HKLT(0.001)VS(0.999)DGES(1)GEEKK;HKLT(0.006)VS(0.994)DGES(1)GEEKK;HKLT(0.004)VS(0.996)DGES(1)GEEKK 162.09 2.9959e-08 15628240000.0 19025290.0 18111240.0 16078750.0 17912300.0 17330120.0 17181150.0 16176970.0 17705730.0 20888110.0 15210840.0 True False 17969919.23772465 17241148.844874535 17115211.95190959 19614679.606470607 18693901.849105496 17073916.069826014 17812295.99961279 17644312.955178466 17095355.770402595 15076083.79145446 1.1919487505044577 1.1436092478238475 1.135255825628335 1.3010460725608828 1.2399706785724893 1.1325166605603492 1.1814935659689878 1.170351213169812 1.1339387606808549 1.0 23.84575838271195 -8.458557882552416 0.798981764031457 0.9983195814720595 1.1930641403749502 0.5856990350252833 0.048039716888049394 1.1851411539254102 1.2772991459637244 0.05391261001024088 0.01803179218399736 3.4789013793464467e-09 8.458557882552416 0.19474455890289077 HKMS(ph)PPPSGFGER ddPTM_KYSE-520_SHP099_60min_R1 15 HKMSPPPSGFGER 13 1 A0A087WZ13;Q8IY67-2;E9PAU2;K7EQG2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 HKMS(1)PPPSGFGER;HKMS(1)PPPSGFGER;HKMS(1)PPPSGFGER;HKMS(1)PPPSGFGER;HKMS(0.998)PPPS(0.002)GFGER;HKMS(1)PPPSGFGER;HKMS(0.992)PPPS(0.008)GFGER;HKMS(0.999)PPPS(0.001)GFGER;HKMS(0.99)PPPS(0.01)GFGER;HKMS(0.999)PPPS(0.001)GFGER;HKMS(0.988)PPPS(0.012)GFGER;HKMS(0.985)PPPS(0.015)GFGER;HKMS(0.998)PPPS(0.002)GFGER;HKMS(0.989)PPPS(0.011)GFGER;HKMS(1)PPPSGFGER 133.86 1.3709e-05 74788950000.0 23850810.0 21563670.0 21632610.0 21527720.0 21772460.0 20547920.0 21035480.0 21665170.0 26927420.0 20385650.0 True False 22527758.02388902 20527718.925471455 23027082.653999824 23573708.036254983 23485828.733648423 20419672.809416063 23161951.604900938 21590018.581958666 22038079.31301847 20205049.000795722 1.1149568616736254 1.015969766995518 1.13966972577463 1.1667236261256577 1.1623742527287855 1.0106222859747527 1.1463447380894134 1.0685457175138948 1.0907213990003468 1.0 24.26821251452624 -6.247105008950557 24.926327976429096 1.0727245493831707 1.1178580957675364 0.20060966844578587 0.05490151213220532 1675.688363121509 2913889.747485017 0.018750176507961583 0.018677902968333705 5.661023934338606e-07 6.247105008950557 0.04513354638436562 HKPWYEEVFVNQQDVEMMS(ph)DEDL ddPTM_KYSE-520_SHP099_60min_R1 3 HKPWYEEVFVNQQDVEMMSDEDL 23 1 Q96PZ2 Q96PZ2 FAM111A Protein FAM111A 1 HKPWYEEVFVNQQDVEMMS(1)DEDL;HKPWYEEVFVNQQDVEMMS(1)DEDL;HKPWYEEVFVNQQDVEMMS(1)DEDL 148.0 3.6803000000000005e-07 364620000.0 409755.0 460392.0 420735.0 511212.0 354458.0 369114.0 331212.0 413486.0 565721.0 331759.0 True False 387025.0733236589 438274.0772575194 447856.2512998016 559797.4347785081 382351.82800985925 366810.2226101133 364694.1412776153 412051.71357435785 463000.3270658727 328819.87336459593 1.1770124152274852 1.3328697951646022 1.3620108989070072 1.7024440434529453 1.1628002410484084 1.1155354415071914 1.1091000599992382 1.2531229008700284 1.4080667397876445 1.0 18.326937970348467 HKRIHT(ph)GEKPY(ph)TCEER ddPTM_KYSE-520_SHP099_60min_R1 1 HKRIHTGEKPYTCEER 16 3 A6NP11 A6NP11 ZNF716 Zinc finger protein 716 2 HKRIHT(1)GEKPY(0.59)T(0.411)CEER 50.722 0.062322 0.0 243740.0 244970.0 234540.0 229360.0 222780.0 243970.0 233350.0 252360.0 314030.0 246100.0 True False 230219.25631635592 233201.2734925338 249658.82367726817 251158.3054404015 240311.5185551929 242447.29273392376 256939.29527653477 251484.622061267 257010.06805208922 243919.74546290297 0.943831979979535 0.956057382931308 1.023528551177658 1.0296759902063748 0.9852073193137255 0.9939633721485531 1.0533763668411662 1.0310137934262258 1.0536665146330972 1.0 17.89604702440515 -2.422057840401873 0.5144268445906369 1.0287195876081654 0.33979299252110146 0.5593086316422142 0.023909329275043904 19.001865681711486 0.8391347312812077 0.013624733320296137 11.822039028486742 0.003783921861637399 2.422057840401873 -0.688926595087064 HKS(ph)DNETNLQQQVVWGNR ddPTM_KYSE-520_SHP099_60min_R1 3 HKSDNETNLQQQVVWGNR 18 1 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 HKS(0.999)DNET(0.001)NLQQQVVWGNR;HKS(0.974)DNET(0.026)NLQQQVVWGNR;HKS(0.991)DNET(0.009)NLQQQVVWGNR 278.98 6.7699e-31 3758960000.0 1453210.0 1301400.0 1089580.0 1388490.0 1316010.0 1306290.0 1365750.0 1629500.0 1893100.0 1373740.0 True False 1372597.544397686 1238878.7905587764 1159816.0701896409 1520451.6721352583 1419572.4999273675 1298136.9595663287 1503813.3384355127 1623847.6448281594 1549360.7611674352 1361569.7323535464 1.0080993369506512 0.9098900784297752 0.851822747399677 1.1166902700657688 1.04259992433407 0.9534120278382138 1.1044703056347254 1.1926290708748728 1.1379224466816562 1.0 20.37683944075799 -5.910385429520345 0.7661781809395878 1.1151647626895271 0.9289738449617829 0.34055117551007175 0.08309423929128 0.7544172262545137 0.9801859119375473 0.05294171023133755 0.07651541342208115 1.2291774109869092e-06 5.910385429520345 -0.1861909177277442 HKS(ph)DS(ph)PES(ph)DAER ddPTM_KYSE-520_SHP099_60min_R1 1 HKSDSPESDAER 12 1 O75400-3;O75400;O75400-2 O75400-3 PRPF40A Pre-mRNA-processing factor 40 homolog A 3 HKS(1)DS(1)PES(1)DAER 130.95 6.1137e-05 0.0 457790.0 412090.0 343880.0 441880.0 419420.0 441880.0 445810.0 475760.0 473480.0 410330.0 True False 432395.4761182598 392292.5778402994 366047.05502745404 483876.14234393346 452425.96782664064 439122.06301293644 490876.8254863157 474109.6996032184 387507.9674594884 406694.79543190886 1.0631940240569266 0.964587160314372 0.9000534532012218 1.1897770706164514 1.1124459248271554 1.0797336674706888 1.2069906745794614 1.1657628888506308 0.9528225386999505 1.0 18.633587002850284 -5.260669000741716 24.99914537960229 1.1119804765778647 0.9748091084786767 0.31284144985465323 0.08389728661509395 76.93383379025335 2496513.2247000393 0.022952826967094133 0.03699456625628365 5.48694995661359e-06 5.260669000741716 -0.13717136809918795 HKS(ph)DS(ph)PES(ph)DAEREK ddPTM_KYSE-520_SHP099_60min_R1 5 HKSDSPESDAEREK 14 2 O75400-3;O75400;O75400-2 O75400-3 PRPF40A Pre-mRNA-processing factor 40 homolog A 3 HKS(1)DS(1)PES(1)DAEREK;HKS(1)DS(1)PES(1)DAEREK;HKS(1)DS(1)PES(1)DAEREK;HKS(1)DS(1)PES(1)DAEREK;HKS(1)DS(1)PES(1)DAEREK 86.625 0.0017684999999999999 4322550000.0 8165000.0 7727540.0 6709160.0 7185470.0 7315450.0 7335220.0 7011840.0 7698320.0 9370250.0 6618810.0 True False 7712071.17347603 7356297.379125981 7141643.188635557 7868374.908409661 7891134.295783208 7289438.171118289 7720665.216163768 7671616.324721403 7668848.804780083 6560172.49275626 1.1755896940197375 1.1213573099257377 1.0886364949277412 1.1994158563815078 1.2028851839637746 1.111165625472087 1.1768997270557937 1.1694229584957407 1.1690010915487394 1.0 22.645302318797462 -10.700374143077628 6.576137666198888 0.9983270912847095 1.1562619112233805 0.6309612814392881 0.03605021243214409 0.0009289165385156763 4.232381493281952e-05 0.036670543733444756 0.008805334611128505 1.9935441441256457e-11 10.700374143077628 0.15793481993867098 HKS(ph)DS(ph)PESDAER ddPTM_KYSE-520_SHP099_60min_R1 1 HKSDSPESDAER 12 1 O75400-3;O75400;O75400-2 O75400-3 PRPF40A Pre-mRNA-processing factor 40 homolog A 2 HKS(0.997)DS(0.937)PES(0.066)DAER 67.418 0.018144999999999998 374570000.0 334930.0 321820.0 247150.0 330040.0 298680.0 329920.0 307950.0 312760.0 370820.0 278960.0 True False 316350.7652335983 306359.28413833195 263081.68445398187 361406.9023698559 322184.416743267 327860.8469023895 339080.5913023736 311675.1085587325 303488.4356114881 276488.6314275957 1.1441727770150338 1.108035735706401 0.951509952129353 1.307131148589369 1.165271841665713 1.1858022704569924 1.2263816763517417 1.1272619309859442 1.0976524931404383 1.0 18.07686063583633 -3.7563350428618727 15.970066538401982 1.138903227623202 42.2412506764068 0.0 0.09800419775003481 6821.282391004519 446848.3466326976 0.02368636837476691 5387.147554136415 0.0001752527966731493 3.7563350428618727 41.1023474487836 HKS(ph)HDNVYSLGGLEGR ddPTM_KYSE-520_SHP099_60min_R1 7 HKSHDNVYSLGGLEGR 16 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 HKS(1)HDNVYSLGGLEGR;HKS(1)HDNVYSLGGLEGR;HKS(1)HDNVYSLGGLEGR;HKS(1)HDNVYSLGGLEGR;HKS(1)HDNVYSLGGLEGR;HKS(1)HDNVYSLGGLEGR;HKS(1)HDNVYSLGGLEGR 262.94 1.6344e-29 34674400000.0 14193740.0 15503270.0 14737690.0 24323950.0 13869020.0 12515640.0 16241610.0 15247230.0 20129450.0 11245960.0 True False 13406384.9476808 14758469.638317319 15687705.07853774 26635690.89473779 14960432.970070649 12437525.248319067 17883470.441638406 15194340.91786024 16474449.30214034 11146329.54362448 1.202762299034038 1.324065431634302 1.4074323764732808 2.389637843605026 1.3421846995926812 1.1158404387418395 1.604426853848715 1.3631698989692222 1.478015631752379 1.0 23.41006537695916 HKT(ph)DPSAAGR ddPTM_KYSE-520_SHP099_60min_R1 1 HKTDPSAAGR 10 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 EP400 E1A-binding protein p400 1 HKT(0.997)DPS(0.003)AAGR 58.486999999999995 0.056773000000000004 0.0 203720.0 288270.0 187700.0 241600.0 409300.0 378480.0 260920.0 259060.0 338670.0 767710.0 True False 192419.2454942485 274421.0764979083 199799.44233061856 264561.5913603113 441509.5814015643 376117.76592997235 287296.33993380476 258161.38132505858 277176.0651759419 760908.686669342 0.25288086319070446 0.3606491571269968 0.26258005176045884 0.3476916428939105 0.5802399014974385 0.494300791302987 0.37757006191026876 0.33928037075655615 0.3642698132271299 1.0 19.53736380701767 -10.989221357185825 2.8290563674789793 1.5784812575770992 0.3794323508395566 0.8024193474259042 0.09294837442481983 29112554.321412917 11031822.476976585 109855366.0448828 0.025986336491258418 1.0251292910717117e-11 10.989221357185825 -1.1990489067375427 HKT(ph)IHT(ph)GKK ddPTM_KYSE-520_SHP099_60min_R1 1 HKTIHTGKK 9 2 B9EG95;O95780-2;O95780-3;O95780 B9EG95 ZNF682 Zinc finger protein 682 2 HKT(1)IHT(1)GKK 42.19 0.05461900000000001 364910000.0 446450.0 448910.0 322210.0 259180.0 189150.0 279210.0 241030.0 262490.0 362630.0 143760.0 True False 421684.5285239892 427343.6897723528 342980.1721542281 283812.38927469146 204035.02888371787 277467.34682230896 265395.66462611145 261579.4834556264 296785.53315838997 142486.39824358767 2.9594721581992567 2.9991893615121583 2.407108161776159 1.9918560141403807 1.4319614461368426 1.9473251499273956 1.862603503896591 1.835820728715755 2.0829043109856715 1.0 17.12046468056957 -5.062961671842462 1.9371771623760838 1.7556413275666332 3.0098314269423616 0.7461680115747704 0.2953272843112318 0.1672299254266958 1.21938298131115 0.08390848988445791 0.21078568761130645 8.650442588882297e-06 5.062961671842462 1.2541900993757285 HLAESESLLTS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 6 HLAESESLLTSPPK 14 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 HLAESESLLT(0.046)S(0.954)PPK;HLAESESLLT(0.004)S(0.996)PPK;HLAESESLLT(0.004)S(0.996)PPK;HLAESESLLT(0.005)S(0.995)PPK;HLAESESLLT(0.006)S(0.994)PPK;HLAESESLLT(0.003)S(0.997)PPK 167.69 1.9177999999999998e-08 3387280000.0 2788190.0 3339250.0 2523190.0 3728730.0 2463390.0 2837880.0 2547010.0 2877780.0 3292590.0 2936150.0 True False 2633523.5425810306 3178827.417683565 2685838.86464674 4083107.378116447 2657244.7782281926 2820167.7382618664 2804486.6272221426 2867797.6528589046 2694738.6554393806 2910137.9952901336 0.9049479945085817 1.0923287565154256 0.9229249159296201 1.4030631484571134 0.9130992353382444 0.9690838519775082 0.963695409551375 0.9854507440885092 0.9259831182578412 1.0 21.47265613496649 HLAGEVAK ddPTM_KYSE-520_SHP099_60min_R1 3 HLAGEVAK 8 0 Q13200;Q13200-3 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 ;; 116.73 0.0014192 624440000.0 2302510.0 2120670.0 1524320.0 1435370.0 2120540.0 2095660.0 1476860.0 2032410.0 1875920.0 1816780.0 False True 2174785.180360109 2018789.830009436 1622580.1061982336 1571787.1332402737 2287414.4337778464 2082580.2085943953 1626155.421564615 2025360.0440780604 1535300.216094881 1800684.7426334517 1.2077545440739093 1.1211234161161445 0.9010906061353388 0.8728830183464421 1.2703025574774216 1.1565490389776276 0.9030761371290389 1.1247721470200427 0.8526202170456262 1.0 20.780114190850906 -4.531009061074964 23.740438104207588 1.0197892379140163 1.1860968352685155 0.19234541963485663 0.1306064622922573 146.26865591466574 427105.0767174037 0.034249130157973894 0.09103384491671815 2.9443602023324586e-05 4.531009061074964 0.16630759735449918 HLAGLGLTEAIDK ddPTM_KYSE-520_SHP099_60min_R1 2 HLAGLGLTEAIDK 13 0 P50454;E9PKH2 P50454 SERPINH1 Serpin H1 0 ; 168.94 1.2061e-06 966440000.0 2013640.0 1917310.0 1232270.0 1282770.0 1913170.0 1888610.0 1316760.0 1605570.0 1641590.0 1448670.0 False True 1901939.3751081794 1825199.549659019 1311704.0959017114 1404684.0751211375 2063725.594551748 1876822.4844456932 1449870.9511391877 1600000.652412856 1343518.637116292 1435835.9108482066 1.324621679077957 1.2711755820209285 0.9135473531420694 0.9783040419231008 1.4372990527396834 1.3071288092641296 1.0097748218894247 1.1143339154037948 0.9357048580311805 1.0 20.453459454883482 -6.784194446951089 24.63665422369015 1.0244811141211945 1.1952979893300304 0.2664919222575983 0.15388075080240435 354.3004078119154 383592.69309558393 0.07097323596526 0.04788985996489976 1.643635652385916e-07 6.784194446951089 0.17081687520883593 HLAPPPLLS(ph)PLLPSIKPTVR ddPTM_KYSE-520_SHP099_60min_R1 2 HLAPPPLLSPLLPSIKPTVR 20 1 Q14676;Q14676-3;Q14676-2;H0Y6Z8 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 HLAPPPLLS(1)PLLPSIKPTVR;HLAPPPLLS(1)PLLPSIKPTVR 130.71 1.0939000000000001e-05 1329670000.0 1953840.0 2345900.0 2551000.0 1903720.0 2213800.0 2443400.0 1619010.0 1955530.0 2527200.0 1326660.0 True False 1845456.6003165236 2233199.4427323146 2715441.5417443123 2084648.9764257087 2388013.465201034 2428149.83426679 1782675.330814924 1948746.7228541349 2068324.1855276225 1314906.8245258606 1.4034884950741455 1.6983708663445254 2.0651208824043237 1.5853967273897205 1.816108503400705 1.8466326198758238 1.3557427017368588 1.4820416827305076 1.5729815580457078 1.0 20.326529141802165 -8.339855048992554 0.5141267478853935 0.9796792544802029 1.743034764940043 0.5283119079797987 0.19469762505825822 1.2039244254025494 0.6544038656709716 0.277461674188815 0.10491050509247458 4.572407737584345e-09 8.339855048992554 0.7633555104598402 HLDAHTAAHSQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 HLDAHTAAHSQSPR 14 0 H7C3X3;H0Y6N5;E9PHI4;O94901-9 H7C3X3 SUN1 1 HLDAHT(0.008)AAHS(0.046)QS(0.945)PR;HLDAHT(0.001)AAHS(0.137)QS(0.862)PR 121.27 0.00015798 31192000.0 22229.8 30007.0 29975.0 42143.0 25822.6 24158.7 28614.1 25985.7 42311.0 15225.5 True False 20996.66867999235 28565.41867857473 31907.236461695742 46148.25804924505 27854.691709504095 24007.916592085257 31506.692474704465 25895.561671807965 34628.38897351194 15090.613915259753 1.3913727299563567 1.89292621486321 2.1143763031026115 3.058076915120037 1.8458289282278437 1.5909171573071825 2.087833712506861 1.7160045189163682 2.294697165268765 1.0 13.881363878222839 -5.969373544574912 24.998774219744337 1.794939927771074 2.1425912862767498 0.10734310020488325 0.4980865018622522 509.6969058644703 416036.7827077237 0.1570246296052977 0.17804760559126645 1.0730660516901202e-06 5.969373544574912 0.34765135850567574 HLDDDEDRKNPAYIPR ddPTM_KYSE-520_SHP099_60min_R1 4 HLDDDEDRKNPAYIPR 16 2 O15234;J3KSY7 O15234 CASC3 Protein CASC3 0 ;;; 201.3 1.9323e-12 3178940000.0 1614780.0 1777000.0 1466170.0 1127500.0 1537450.0 1728340.0 1272330.0 1318870.0 1462990.0 1529840.0 False True 1525204.9344158769 1691630.2526686208 1560681.6641549421 1234657.261004763 1658438.568106117 1717552.7889648273 1400949.5331441762 1314295.147796571 1197347.8949766785 1516286.8077975106 1.0058815565581027 1.1156400253365035 1.0292786668914686 0.8142636700758282 1.0937499156344237 1.132736089328421 0.9239343941659243 0.866785321245165 0.7896579254131293 1.0 20.53211123645555 -6.9643660782277 9.403796659085767 0.8759178637209837 1.0286599391497109 0.3317923347492755 0.09593850698884966 0.3810480693675367 95.52759960370874 0.04189433677696676 0.02813110560064675 1.0855102327762427e-07 6.9643660782277 0.1527420754287272 HLDGEEDGS(ph)SDQSQASGTTGGR ddPTM_KYSE-520_SHP099_60min_R1 2 HLDGEEDGSSDQSQASGTTGGR 22 0 Q5H909;Q9UNF1-2;Q9UNF1;Q5H907 Q5H909 MAGED2 Melanoma-associated antigen D2 1 HLDGEEDGS(0.5)S(0.5)DQSQASGTTGGR;HLDGEEDGS(0.889)S(0.111)DQSQASGTTGGR 363.18 6.7121e-79 364060000.0 64775.0 76296.0 65467.0 71515.0 72911.0 74450.0 67531.0 69443.0 85980.0 68338.0 True False 61181.80162423882 72630.62563736923 69687.10757090361 78311.76409823119 78648.68089315773 73985.32993417469 74357.6925190472 69202.11844111804 70368.19937941799 67732.57848615949 0.9032846968426094 1.0723144941574994 1.0288565580763105 1.1561905046067817 1.1611647253209005 1.0923152726171925 1.097812812991336 1.0216962056930823 1.0389121594388595 1.0 16.047562297769495 -3.9311735072798593 1.7275093008942133 1.0835781283080526 0.6642965957528264 0.48145526554961227 0.0524630459225398 2.3712641145785827 3.347971784643577 0.015139041872798374 2.161368308008189 0.0001171727149129019 3.9311735072798593 -0.41928153255522616 HLDMVLPEVASSCGPST(ph)SPSNTSPEAGPSSQPK ddPTM_KYSE-520_SHP099_60min_R1 1 HLDMVLPEVASSCGPSTSPSNTSPEAGPSSQPK 33 0 Q92551-2;Q92551 Q92551-2 IP6K1 Inositol hexakisphosphate kinase 1 1 HLDMVLPEVAS(0.004)S(0.004)CGPS(0.081)T(0.407)S(0.251)PS(0.06)NT(0.087)S(0.105)PEAGPSSQPK 74.39699999999999 0.019967 455150000.0 103280.0 128420.0 74368.0 89122.0 78672.0 106330.0 89901.0 84206.0 116690.0 94569.0 True False 97550.85251642429 122250.51043765026 79161.88027300715 97592.12808449366 84863.0388175516 105666.35502888927 98989.07042920827 83913.90903982811 95502.03751551865 93731.19223356867 1.0407512183706937 1.304267101745749 0.8445628225419745 1.0411915794403204 0.905387382741078 1.1273339483997962 1.0560952877088932 0.895261300322769 1.0188928065433887 1.0 16.5162416130483 -4.759039078307393 24.999999982292323 0.9889801790940466 1.1725091188167045 0.35998737632744593 0.09936609730549058 62.85254246876534 654592.5101270784 0.024481791175030427 0.05881200621788563 1.7416501506954272e-05 4.759039078307393 0.18352893972265794 HLDRS(ph)PESDRPR ddPTM_KYSE-520_SHP099_60min_R1 2 HLDRSPESDRPR 12 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 HLDRS(1)PESDRPR;HLDRS(1)PESDRPR 185.26 6.7232e-08 13882400000.0 5253000.0 5289200.0 5676600.0 5009200.0 5574600.0 5095500.0 5530500.0 4591000.0 6624300.0 4065500.0 True False 4961605.618404119 5035098.892748941 6042522.718881131 5485272.861929097 6013289.3048647875 5063697.094420242 6089576.912478578 4575074.892547451 5421494.105013702 4029482.832911141 1.231325662410021 1.2495645474958585 1.499577729808976 1.3612845839986383 1.492322849907869 1.256661786237695 1.5112552069316303 1.135400020861273 1.3454565585273601 1.0 21.942163256148714 -8.440478728699084 0.794733865287673 0.9996622174289534 1.3667731328099881 0.43143668851296835 0.11989219019820045 1.3488900952286487 1.4659053313576025 0.1201149469623645 0.04050357912581373 3.626780494109461e-09 8.440478728699084 0.3671109153810347 HLDRSPES(ph)DRPR ddPTM_KYSE-520_SHP099_60min_R1 1 HLDRSPESDRPR 12 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 HLDRS(0.402)PES(0.598)DRPR 53.328 0.05221900000000001 229430000.0 399600.0 389180.0 406390.0 375710.0 393100.0 365670.0 386040.0 358280.0 442010.0 316720.0 True False 377433.39141714905 370483.2086289108 432586.54964699066 411417.36543866934 424034.7335669552 363387.7178916011 425064.6905873303 357037.210303181 361752.1261653475 313914.107204431 1.2023460645919688 1.1802056681308692 1.3780411256422964 1.3106048947674118 1.3507985905546132 1.157602380879784 1.3540796059557605 1.1373723006040848 1.152392064781475 1.0 18.26001033908972 -7.869157480841209 1.114680979374138 1.004652540452375 1.278149269687012 0.5514317739966403 0.07747265684229594 0.3550075783338479 0.9700315160762143 0.07354804597281464 0.024080012248752426 1.3515823729354125e-08 7.869157480841209 0.2734967292346371 HLDS(ph)PPAIPPR ddPTM_KYSE-520_SHP099_60min_R1 1 HLDSPPAIPPR 11 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 HLDS(1)PPAIPPR 89.62899999999999 0.022855 0.0 54367.0 48933.0 44034.0 44589.0 52652.0 49252.0 54215.0 67212.0 71446.0 59320.0 True False 51351.154132072435 46582.18523006957 46872.502096891076 48826.72515382832 56795.41285109981 48944.599998898215 59695.58128741083 66978.85725939873 58473.20740709341 58794.470950261624 0.8734010750009807 0.7922885345711626 0.7972263605627784 0.8304645720026 0.9659992161362766 0.8324694347586509 1.0153264469019803 1.1392033328450366 0.9945358204950939 1.0 15.843392869514256 -6.827826931876898 4.581110962838243 1.0545359980044915 0.8478944048634278 0.7092215356969904 0.059138193155208636 0.1130023240186085 4.599718540741656 0.026122719076096316 0.01758813049749106 1.4865279117066132e-07 6.827826931876898 -0.20664159314106367 HLDVDLDRQS(ph)LS(ph)SIDKNPSER ddPTM_KYSE-520_SHP099_60min_R1 2 HLDVDLDRQSLSSIDKNPSER 21 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 2 HLDVDLDRQS(0.965)LS(0.627)S(0.409)IDKNPSER;HLDVDLDRQS(0.983)LS(0.591)S(0.425)IDKNPSER 83.31200000000001 0.0032668 3925130000.0 1803960.0 1848560.0 1410980.0 1770610.0 1763400.0 1619260.0 1478110.0 1532490.0 1949320.0 1375800.0 True False 1703890.7426948936 1759752.4028548722 1501934.0284478227 1938888.2420466915 1902169.547626479 1609153.597706002 1627531.78376344 1527174.149875854 1595372.6263583044 1363611.4823562033 1.2495426774719711 1.2905086423987655 1.1014383846728908 1.4218773214614324 1.394949787559499 1.180067503483854 1.1935450858416103 1.119948144787567 1.169961273427852 1.0 20.379001222248938 -7.582213957668419 0.7517098978483413 1.0186005495300816 1.2819699041281403 0.4698361270794894 0.09031689968845742 0.5915303924486264 0.6961717773612202 0.09055652434653096 0.0380828088685318 2.6168934630142948e-08 7.582213957668419 0.26336935459805866 HLDVDLDRQS(ph)LSS(ph)IDKNPSER ddPTM_KYSE-520_SHP099_60min_R1 1 HLDVDLDRQSLSSIDKNPSER 21 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 2 HLDVDLDRQS(1)LS(0.247)S(0.753)IDKNPSER 115.79 6.8781e-05 2048300000.0 669300.0 674530.0 621930.0 684210.0 649720.0 603140.0 501000.0 631640.0 681450.0 470470.0 True False 632172.5947835278 642124.5663098282 662020.602923184 749237.1126847633 700849.2675988856 599375.579536577 551645.9692888106 629448.988265884 557715.857956552 466302.00182012154 1.3557149493589171 1.3770572800533056 1.419724985822733 1.6067636633775066 1.5029943359952418 1.2853806700314987 1.183022948937738 1.3498740854831184 1.196040025090207 1.0 18.830905097573257 -6.422653531860827 4.080205691955856 1.2132808589524167 1.454111226865975 0.5958397158088204 0.10411910024366688 0.18959875284658162 5.5371870328793795 0.039704466926295985 0.03416024183620448 3.7787352777106777e-07 6.422653531860827 0.24083036791355839 HLDVDLDRQS(ph)LSSIDKNPSER ddPTM_KYSE-520_SHP099_60min_R1 3 HLDVDLDRQSLSSIDKNPSER 21 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 HLDVDLDRQS(1)LSSIDKNPSER;HLDVDLDRQS(0.995)LS(0.004)S(0.001)IDKNPSER;HLDVDLDRQS(0.453)LS(0.453)S(0.094)IDKNPSER 236.82 1.3302000000000002e-26 5463600000.0 2449280.0 2370760.0 1962970.0 2118380.0 2153490.0 2220660.0 1964830.0 1992430.0 2374070.0 1785860.0 True False 2313413.555881369 2256865.131016692 2089506.1870630505 2319710.1982858293 2322957.411317993 2206800.0372279957 2163454.1912928815 1985518.7253666564 1942998.733434462 1770038.6697780539 1.3069847542774018 1.2750371896110506 1.1804861796183552 1.3105421016461176 1.312376645200226 1.2467524438348614 1.2222638003519766 1.1217374847610655 1.0977154152672244 1.0 20.75534944832602 -7.527399556490876 1.0377915071013706 1.0088907648243324 1.2751215497348714 0.8577878363907516 0.03790431758391681 0.1860877961365471 0.3721516958729038 0.036890436725846264 0.013315102764072193 2.9689333181514756e-08 7.527399556490876 0.266230784910539 HLDVDLDRQSLS(ph)S(ph)IDKNPSER ddPTM_KYSE-520_SHP099_60min_R1 1 HLDVDLDRQSLSSIDKNPSER 21 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 2 HLDVDLDRQS(0.395)LS(0.681)S(0.924)IDKNPS(0.001)ER 109.97 0.00012103 1325400000.0 765750.0 859490.0 729870.0 781240.0 886420.0 783490.0 653600.0 694390.0 949980.0 732250.0 True False 723272.3210152192 818198.8102792088 776918.5880332901 855488.8147116292 956176.2109601124 778599.9482891404 719672.2665212901 691981.3231618447 777487.5790469811 725762.8346818793 0.996568419395915 1.1273638869064528 1.0704854959593428 1.1787443140245837 1.3174775081714254 1.0728021759758763 0.9916080462245509 0.9534537869594248 1.0712694862472176 1.0 19.469138654713717 -6.522461796729812 14.858369714657378 1.004765600900891 1.1419384818958347 0.3771396939351296 0.08116066050169482 0.12127972479948053 3621.96438644522 0.03228797414875134 0.025713989225820792 3.002881561564929e-07 6.522461796729812 0.13717288099494374 HLDVDLDRQSLS(ph)SIDKNPSER ddPTM_KYSE-520_SHP099_60min_R1 1 HLDVDLDRQSLSSIDKNPSER 21 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 HLDVDLDRQS(0.004)LS(0.498)S(0.498)IDKNPSER 197.73 1.2459e-13 3140400000.0 738580.0 726130.0 662530.0 649560.0 628350.0 666140.0 619810.0 595050.0 737640.0 517440.0 True False 697609.4950772723 691245.6248566487 705237.7438854798 711293.9871026643 677797.570177554 661982.373167914 682466.4435626694 592985.9104357137 603703.1703911828 512855.8841622282 1.3602446937249184 1.3478360026732026 1.3751187529758295 1.3869276127436718 1.3216141046812109 1.2907765975022207 1.3307177798642347 1.1562427745259884 1.1771399900721768 1.0 18.968193950533287 -7.711979161104488 0.6508822685732085 0.9998757680318214 1.3682328805008968 0.9306462858119069 0.03115490053685954 0.1585308563515228 0.1540386328902391 0.029746110644220305 0.0133825073646831 1.9409790099950284e-08 7.711979161104488 0.3683571124690753 HLEAADKGHS(ph)PAQKPK ddPTM_KYSE-520_SHP099_60min_R1 5 HLEAADKGHSPAQKPK 16 2 Q14966;Q14966-3;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0 Q14966 ZNF638 Zinc finger protein 638 1 HLEAADKGHS(1)PAQKPK;HLEAADKGHS(1)PAQKPK;HLEAADKGHS(1)PAQKPK;HLEAADKGHS(1)PAQKPK;HLEAADKGHS(1)PAQKPK 184.62 3.0011e-12 17249740000.0 6166520.0 5762600.0 6182820.0 6056060.0 5928820.0 5204220.0 5259560.0 5980750.0 7066070.0 4183580.0 True False 5824450.842947142 5485756.04616106 6581374.470061774 6631626.121579174 6395384.403628684 5171738.532572607 5791247.653158984 5960004.174167545 5783049.809129146 4146516.7359759905 1.4046611201187413 1.322979357243531 1.5872055725617797 1.599324576226086 1.542351040848594 1.247248922861348 1.396653630482903 1.4373520122220615 1.3946765869661815 1.0 21.983468484608142 -6.254420156821152 24.818297954583652 1.3288624433120342 1.4932819191270235 0.3170841154764281 0.13958492226391625 752.3242707889667 2660039.6908532 0.04727190459844877 0.046288392957161126 5.566469620095487e-07 6.254420156821152 0.16441947581498928 HLEEEKER ddPTM_KYSE-520_SHP099_60min_R1 2 HLEEEKER 8 1 Q9H6F5;Q9H6F5-2 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 0 ; 149.72 0.00042176 439662400.0 404415.0 388740.0 282563.1 243377.4 426410.0 353572.5 265169.6 367908.0 425140.0 267116.2 False True 381981.2937686845 370064.3468893643 300777.5695429452 266507.91492191626 459966.04105898057 351365.7228764404 291975.5309739045 366631.81301837286 347945.29290725454 264749.75828125904 1.4428012937518289 1.3977891775682887 1.1360825086133288 1.0066408243470026 1.7373615146810897 1.3271616380596056 1.1028358736544035 1.3848239764165473 1.3142421551811656 1.0 18.0142698414624 -10.93765237541728 2.2161043666870257 0.7723331835103423 1.3129974356486112 0.19217388689559378 0.19462937290648796 14203965.333018519 6062168.023582056 16700856.536492566 0.04962196001001167 1.1543768919949255e-11 10.93765237541728 0.5406642521382689 HLEFSHDQYR ddPTM_KYSE-520_SHP099_60min_R1 7 HLEFSHDQYR 10 0 Q9NR45 Q9NR45 NANS Sialic acid synthase 0 ;;;;;; 229.53 7.828200000000001e-10 27874710000.0 1555024.0 1648497.0 1140313.0 1286462.0 1654527.0 1428937.0 1353393.0 1450901.0 1407378.0 1160520.0 False True 1468763.7188565072 1569300.7296755572 1213819.4005453105 1408726.9616910974 1784728.8619291112 1420018.4741457342 1490207.172282816 1445868.1630738396 1151833.6323122424 1150238.6956708983 1.2769208029467511 1.3643261486349432 1.0552760962691552 1.2247257608295214 1.5516160851188672 1.2345424297497503 1.2955634146994373 1.257015755525865 1.001386613619718 1.0 20.133501847300064 -7.744505928509907 4.8065738649902325 0.9935016962851717 1.285274714424442 0.48300558459247167 0.11689428698299721 0.15904100888464845 9.120708036917954 0.09980372755633946 0.03102287529713271 1.8009185501177227e-08 7.744505928509907 0.29177301813927037 HLEGLSEEAIMELNLPTGIPIVYELDK ddPTM_KYSE-520_SHP099_60min_R1 1 HLEGLSEEAIMELNLPTGIPIVYELDK 27 0 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 0 186.13 5.132100000000001e-15 375240000.0 498520.0 343890.0 353000.0 885370.0 611180.0 328760.0 350480.0 453420.0 471980.0 281950.0 False True 470866.10182501783 327369.0082105861 375754.9448199694 969515.2986038037 659276.3888614892 326708.0868926697 385909.938755174 451847.1918490235 386280.329647566 279452.1423537805 1.6849615031002743 1.1714671623313013 1.3446128616336446 3.4693428736589103 2.359174573894872 1.1691021014935148 1.3809517991335352 1.616903660294701 1.382277217107691 1.0 18.09224170956036 -6.270884856933771 24.76952282983044 1.352847473709273 2.0041166608839234 0.243581303139224 0.6109590821892903 1090.997452831049 2860988.6714847237 0.2387422117893454 0.2133517448744772 5.359387303500507e-07 6.270884856933771 0.6512691871746503 HLEHAPS(ph)PSDVSNAPEVK ddPTM_KYSE-520_SHP099_60min_R1 3 HLEHAPSPSDVSNAPEVK 18 0 F8WE62;Q9Y4C1 F8WE62 KDM3A Lysine-specific demethylase 3A 1 HLEHAPS(0.916)PS(0.084)DVSNAPEVK;HLEHAPS(0.997)PS(0.003)DVSNAPEVK;HLEHAPS(0.999)PS(0.001)DVSNAPEVK 204.17 2.3305999999999997e-13 2267720000.0 2016540.0 1829610.0 1612870.0 1864210.0 1842380.0 1780670.0 1613720.0 1856140.0 2316860.0 1579260.0 True False 1904678.5063271697 1741712.789299399 1716838.1808832407 2041383.9579048278 1987364.8242917503 1769556.1780240003 1776850.5659894971 1849701.4835663342 1896176.627287723 1565268.9850456882 1.2168378243766036 1.1127242703582736 1.096832683254839 1.3041745395889528 1.2696634529136483 1.1305125156954088 1.1351726655068382 1.1817147731399942 1.211406247362894 1.0 20.57797916900349 -9.81859081560015 6.117399328901551 0.9999999891778171 1.1825856416780338 0.42366783531397023 0.06447075685033127 1.015650982137803e-08 1.956176625873374e-09 0.06692270907425665 0.01623114010699849 1.51848037841544e-10 9.81859081560015 0.18258565250021674 HLEINPDHPIVETLR ddPTM_KYSE-520_SHP099_60min_R1 10 HLEINPDHPIVETLR 15 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;;;;;;;;; 233.31 1.5022e-18 49172920000.0 8537910.0 7185790.0 4890170.0 4860120.0 8181900.0 7234480.0 5238970.0 6046040.0 5429400.0 6113120.0 False True 8064295.112398383 6840573.862309316 5205398.182748651 5322024.343551638 8825768.981357079 7189326.926825893 5768576.215019951 6025067.698396345 4443557.824035963 6058962.5127353985 1.3309696330762824 1.1290008558282116 0.8591236819517151 0.8783722184062399 1.456646903295094 1.1865607208683944 0.9520732638459007 0.9944058385791611 0.733385924520246 1.0 22.530639348852052 -6.870446974220628 5.001758456220564 0.9121243623275197 1.128834381412575 0.2585093609158208 0.18276156288150197 0.34990247689573695 13.920429238580404 0.0845795017841003 0.05643844621075631 1.3475752493453787e-07 6.870446974220628 0.21671001908505527 HLEINPDHSIIETLR ddPTM_KYSE-520_SHP099_60min_R1 8 HLEINPDHSIIETLR 15 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;;;;;;; 256.18 4.1573000000000003e-20 46925110000.0 11393074.0 10072533.0 7295780.0 7662820.0 11722010.0 9856211.0 7920231.0 8925722.0 7924852.0 7698241.0 False True 10761077.473690065 9588633.395499729 7766077.652460729 8391092.108889157 12644465.497886512 9794694.731173165 8720885.243485598 8894760.753661169 6485898.646061633 7630040.573880875 1.410356520321444 1.2566949418753421 1.0178291422257355 1.0997441006557045 1.6571950536109858 1.2837015263984737 1.1429670863532362 1.1657553675546208 0.8500477269104093 1.0 22.863259298150833 -7.452052287777869 1.8360433337259685 0.9331576618459698 1.273863710004948 0.37504061216879825 0.17180246967323187 0.43173251217551617 2.6116490871777858 0.15489847542068025 0.05285414194732697 3.5314065013709776e-08 7.452052287777869 0.3407060481589781 HLELYDR ddPTM_KYSE-520_SHP099_60min_R1 2 HLELYDR 7 0 H0Y8P4;Q8TED0-2;Q8TED0-3;Q8TED0 H0Y8P4 UTP15 U3 small nucleolar RNA-associated protein 15 homolog 0 ; 147.52 0.0024259 435960000.0 207547.0 178716.0 127826.0 124415.0 214146.0 191384.0 134994.0 147418.0 168240.0 185607.0 False True 196033.95417531286 170130.2151018152 136065.86848883147 136239.3641932664 230998.07187593257 190189.50146570962 148640.5109344783 146906.64136561993 137691.85698526725 183962.66638006107 1.0656181389016883 0.9248083779691013 0.7396384884296234 0.7405815912224286 1.2556790810951708 1.0338483628671924 0.8079928056021525 0.7985676890664078 0.7484771758026175 1.0 17.489053488038188 -4.299462871123287 4.389668632238106 0.8900640211511 1.0728388566398217 0.0988015722027914 0.15713481165609805 0.4813288841099501 20.187280332414133 0.04268355176344841 0.2453488293825915 5.018074779275596e-05 4.299462871123287 0.18277483548872175 HLETFEHPNVVR ddPTM_KYSE-520_SHP099_60min_R1 1 HLETFEHPNVVR 12 0 Q00534 Q00534 CDK6 Cyclin-dependent kinase 6 0 168.98 2.6731e-06 397580000.0 139620.0 118060.0 80903.0 91220.0 101710.0 90210.0 69801.0 91081.0 99890.0 101620.0 False True 131875.00027443047 112388.22038832719 86118.13682937679 99889.52137370696 109713.99834926239 89646.96592829966 76857.16627211221 90765.06126946512 81752.4940219826 100719.72585916365 1.3093264417620758 1.115851134716943 0.8550275141713128 0.9917572801318227 1.0893000096393772 0.8900636410950222 0.763079581646018 0.9011646973342825 0.8116830474330031 1.0 16.61998673585734 -1.0000001446639628 0.6208118559164363 0.8887200745803081 32.19014866549282 0.6348877066881697 0.09441971059939787 125.39918562852161 0.9025215926229407 0.04369206202254839 5355.256929138301 0.09999996668989712 1.0000001446639628 31.30142859091251 HLFS(ph)STENLAAGSWK ddPTM_KYSE-520_SHP099_60min_R1 5 HLFSSTENLAAGSWK 15 0 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.808)S(0.096)T(0.096)ENLAAGSWK;HLFS(0.808)S(0.096)T(0.096)ENLAAGSWK;HLFS(0.333)S(0.333)T(0.333)ENLAAGSWK;HLFS(0.38)S(0.241)T(0.38)ENLAAGSWK;HLFS(0.371)S(0.258)T(0.371)ENLAAGSWK 264.23 3.1495e-25 6015420000.0 3152263.0 4252440.0 2824955.0 4808560.0 3875500.0 3724700.0 4017770.0 3525290.0 4063840.0 3148700.0 True False 2977400.6875094986 4048146.399357427 3007056.1193878097 5265564.09665372 4180479.801421354 3701452.7656926867 4423925.401256495 3513061.591798874 3325949.0970697114 3120804.9676515325 0.9540489451828998 1.2971481529022741 0.9635514396308715 1.6872454867361228 1.3395517646100288 1.1860570602968834 1.4175590743773991 1.1256908484231627 1.0657343639043724 1.0 21.5734867692619 -7.484302072452008 6.151716056868396 1.051068153340582 1.270245478319653 0.17926437158976372 0.20128736934182284 0.33270016673683295 36.47558324851256 0.11790228817107042 0.05298625098116643 3.278671665896469e-08 7.484302072452008 0.21917732497907116 HLFS(ph)STENLAAGSWKEPAEGGGLSSDR ddPTM_KYSE-520_SHP099_60min_R1 1 HLFSSTENLAAGSWKEPAEGGGLSSDR 27 1 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.333)S(0.333)T(0.333)ENLAAGSWKEPAEGGGLSSDR 118.59 0.00020665 624170000.0 196000.0 319260.0 205300.0 248750.0 204710.0 195140.0 164530.0 164920.0 331350.0 162280.0 True False 185127.48928368688 303922.27038097027 218533.96649161406 272391.12521058513 220819.5123594289 193922.0588764921 181162.29805805962 164347.9310126172 271185.19265375857 160842.32545192956 1.1509873956592063 1.8895665026417598 1.358684449989046 1.6935288920079299 1.372894303405384 1.2056656003425479 1.126334735269685 1.021795292693249 1.6860312849356736 1.0 17.2952875742659 -6.0412040670322575 3.858772653829342 1.2069682081238766 1.5387240714419923 0.2530211328108468 0.25394826027621586 0.3004189050635692 9.409356961656295 0.08057105536434085 0.08443289211315672 9.094858214645945e-07 6.0412040670322575 0.3317558633181157 HLFSS(ph)TENLAAGSWKEPAEGGGLSSDR ddPTM_KYSE-520_SHP099_60min_R1 2 HLFSSTENLAAGSWKEPAEGGGLSSDR 27 1 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.236)S(0.751)T(0.012)ENLAAGSWKEPAEGGGLSSDR;HLFS(0.16)S(0.796)T(0.044)ENLAAGSWKEPAEGGGLSSDR 87.35700000000001 0.0043058 1636690000.0 387530.0 548270.0 369066.0 479210.0 388950.0 488270.0 398080.0 335257.0 592750.0 418510.0 True False 366032.93837809714 521930.2862299525 392856.5848864789 524753.9743202601 419558.1521772251 485222.5258154395 438321.8112864057 334094.071716572 485121.5420115141 414802.326995853 0.882427398681774 1.2582626766102267 0.9470934932590349 1.2650699867590338 1.01146528086237 1.1697680900914778 1.0567004637145825 0.8054295985661433 1.16952463966376 1.0 18.66206446197262 -7.012109217551847 24.33426528187345 0.9786992780619194 1.0962758756092486 0.08232450823637816 0.14219778258974977 827.6899446390205 1663292.439145768 0.05805895333853598 0.0358509419510423 9.725026254295362e-08 7.012109217551847 0.11757659754732919 HLFSST(ph)ENLAAGSWK ddPTM_KYSE-520_SHP099_60min_R1 1 HLFSSTENLAAGSWK 15 0 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.288)S(0.288)T(0.424)ENLAAGSWK 207.56 6.6556e-13 144520000.0 134620.0 162540.0 110480.0 198920.0 157940.0 169250.0 166450.0 176220.0 199400.0 134950.0 True False 127152.36024168308 154731.33442248608 117601.71757425007 217825.29699252095 170368.97944432704 168193.6479699002 183276.39039545401 175608.7339500573 163193.98646494476 133754.4479895113 0.9506402377859917 1.156831318496561 0.879235938258084 1.6285461924197262 1.2737444025613784 1.2574807828677932 1.3702452004424264 1.3129188343988987 1.2201013791910833 1.0 17.02922734341384 -5.2355569312457115 24.999896012138528 1.3084792035638078 1.011695378514789 0.42116440422635104 0.1598101432450695 710.9436461659287 686700.7719451493 0.04099569630164604 0.0709780713967955 5.813572177548741e-06 5.2355569312457115 -0.2967838250490187 HLFSST(ph)ENLAAGSWKEPAEGGGLSSDR ddPTM_KYSE-520_SHP099_60min_R1 1 HLFSSTENLAAGSWKEPAEGGGLSSDR 27 1 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 HLFS(0.186)S(0.154)T(0.66)ENLAAGSWKEPAEGGGLSSDR 163.82 8.7112e-10 466680000.0 215820.0 319570.0 264780.0 376600.0 287200.0 267150.0 250970.0 173680.0 427250.0 218530.0 True False 203848.0343734964 304217.3775156504 281848.1424629787 412391.9507710811 309801.0060555315 265482.61775573937 276340.4968311628 173077.54461721668 349672.170096026 216593.99421376706 0.9411527550127218 1.4045513063275596 1.3012740426440874 1.9039860835849012 1.4303305462374638 1.2257155084998421 1.2758456107440772 0.7990874596753506 1.6144130467021058 1.0 17.724633714436884 -6.4388820053440545 2.9754089987245003 1.1605911660828652 1.417963724399366 0.11641961365800235 0.29219701433712275 0.5615570492496953 9.665877991837927 0.114778184374404 0.09596315177445769 3.640139226317475e-07 6.4388820053440545 0.25737255831650074 HLGYKPEEYK ddPTM_KYSE-520_SHP099_60min_R1 1 HLGYKPEEYK 10 1 F5H6E2;O00159-2;O00159-3;O00159 F5H6E2 MYO1C Unconventional myosin-Ic 0 107.24 0.0011386 475760000.0 190820.0 160100.0 139480.0 138220.0 186010.0 166510.0 149610.0 156250.0 199420.0 147760.0 False True 180234.83420976074 152408.55568500055 148471.1039758905 151356.38724264165 200647.9287478743 165470.74932625162 164734.0388528918 155708.00521902408 163210.35496910385 146450.9613555405 1.2306838585525075 1.040679789837615 1.0137939867492278 1.0334953478058242 1.3700690448918207 1.1298713767029265 1.1248409524124958 1.0632091710276328 1.114436897227847 1.0 17.160058138042064 -8.26727840449042 0.9870023062279107 1.0017094810616036 1.1288680110711893 0.12818120729238747 0.10099389142454476 2.2740962764331405 4.248355099692643 0.10273873759745235 0.033661136052609245 5.404077834573649e-09 8.26727840449042 0.12715853000958566 HLHSVDHNHNR ddPTM_KYSE-520_SHP099_60min_R1 4 HLHSVDHNHNR 11 0 O43823 O43823 AKAP8 A-kinase anchor protein 8 0 ;;; 84.17 0.0053294 136103600.0 161077.0 36202.9 36451.2 22628.9 36991.1 36111.9 36784.1 19064.93 106775.2 26880.4 False True 152141.73771096134 34463.65834233922 38800.90267598212 24779.543852373135 39902.08911943169 35886.512237070834 40502.59580622062 18998.798207618107 87387.51526375004 26642.260568634734 5.710541615604271 1.2935711012042432 1.4563667589701998 0.930084134134829 1.4976990791242173 1.3469770008675288 1.520238708794227 0.713107589300621 3.2800338033863827 1.0 14.701428878354854 -4.260378753321272 24.99233627019858 1.424334552194775 5.71054298233214 0.7873938083265637 0.6642662413633236 36.644840244666796 863374.9287732329 0.15329447140478264 0.9122414212237561 5.49061821727472e-05 4.260378753321272 4.286208430137365 HLHTHGPR ddPTM_KYSE-520_SHP099_60min_R1 2 HLHTHGPR 8 0 P25490 P25490 YY1 Transcriptional repressor protein YY1 0 ; 128.61 0.0014062 126630000.0 80686.0 100271.0 85362.0 115286.0 116527.0 94773.0 114175.0 115542.0 103223.0 53033.0 False True 76210.18673644666 95453.83065016047 90864.57110402916 126242.74677800025 125697.01195206463 94181.48655274071 125716.92324061859 115141.21176970543 84480.30524007519 52563.16887904963 1.4498780869130998 1.8159831814897673 1.7286737660949039 2.4017339416596224 2.391351484939949 1.7917771808898513 2.3917302917923244 2.1905302557890085 1.6072148434290259 1.0 15.681764633677716 -4.563999548040175 1.7029558361900727 2.0357308513708925 1.4468657563986764 0.08281793574920615 0.42404257724487815 1.0383056163430644 4.569604135428568 0.11501481669693418 0.8300240804640875 2.728980622791081e-05 4.563999548040175 -0.5888650949722161 HLKS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 5 HLKSPVR 7 1 A0A0C4DGI9;J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9 A0A0C4DGI9 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 HLKS(1)PVR;HLKS(1)PVR;HLKS(1)PVR;HLKS(1)PVR;HLKS(1)PVR 99.815 0.003439 15061500000.0 11883150.0 9599030.0 9440070.0 10157460.0 10416760.0 9768230.0 10066730.0 11647060.0 12054510.0 10017300.0 True False 11223967.981027767 9137878.190362236 10048592.01684604 11122821.944448283 11236499.748743115 9707262.853229066 11084373.310217042 11606659.067304244 9865714.853468105 9928554.51534147 1.130473520962658 0.9203633999533878 1.0120901286606312 1.120286133017797 1.1317357155445564 0.9777115931860507 1.116413602109916 1.1690180125787484 0.9936708146411176 1.0 23.243152262370273 -5.233072230577895 21.16608272140407 1.080057755003435 1.0109142860239222 0.0755408054301352 0.07769591489469577 218.5395191641961 163058.97051253452 0.020466678017697346 0.035426082523599536 5.846928316692903e-06 5.233072230577895 -0.06914346897951273 HLLAPGPQDIY(ph)DVPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 HLLAPGPQDIYDVPPVR 17 0 P56945-6;A0A2R8Y6M6;A0A2R8Y5C9;A0A2R8Y8C4;A0A2R8YFS8;A0A2R8Y5E4;A0A2R8Y4C2;A0A2R8YFK2;A0A2R8Y596;P56945;P56945-8;P56945-2;P56945-3;P56945-5;P56945-7;P56945-4;H3BN62 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 HLLAPGPQDIY(1)DVPPVR 122.12 2.6218000000000002e-05 188730000.0 228860.0 257000.0 222400.0 244630.0 191510.0 218720.0 169660.0 218860.0 288110.0 239860.0 True False 216164.6795789008 244653.33423513523 236736.2598525815 267879.5616493088 206580.74745715488 217354.8873499355 186810.8885220348 218100.8257423082 235796.48666206223 237735.02700825606 0.9092672724721959 1.0291009167388654 0.9957988220404734 1.1267988778111602 0.8689537678012451 0.9142737192966824 0.785794549810059 0.9174114075109933 0.991845794157516 1.0 17.858994954781654 -5.791410506746146 24.99996790962994 0.9026158455868017 1.014842816392529 0.30049230485280376 0.07538381511112612 236.32771546139728 197127.98444837323 0.02344582288224275 0.02658829430141365 1.6165513077776656e-06 5.791410506746146 0.11222697080572719 HLLDDNGQDKPVKPPTKK ddPTM_KYSE-520_SHP099_60min_R1 2 HLLDDNGQDKPVKPPTKK 18 3 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;A0A0C4DGD1;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 0 ; 206.74 9.0712e-14 1465160000.0 2124690.0 1664810.0 1411540.0 1122900.0 1762460.0 1642430.0 1337060.0 1519950.0 1625620.0 1178750.0 False True 2006829.210235491 1584830.0286692437 1502530.1269438525 1229620.0783878055 1901155.5749743488 1632178.985141527 1472223.0732480958 1514677.6482089965 1330448.3865453536 1168307.192053622 1.7177239204595969 1.356518250892103 1.2860745334476127 1.0524801069027137 1.627273706697417 1.3970460819234727 1.2601335361637702 1.29647207387856 1.138783014942092 1.0 20.15598823239681 -3.5704801898073235 0.03846946753093807 2.1060298807692994e-11 3.0064322804958987 0.40080717412527156 0.16808502116734927 597.2234559854018 2.9600192101013145 81.3830626701186 160.58755130683227 0.00026885604780244716 3.5704801898073235 3.0064322804748382 HLLGVEDLLQK ddPTM_KYSE-520_SHP099_60min_R1 1 HLLGVEDLLQK 11 0 A0A087WUZ3;Q01082;Q01082-3;Q01082-2;F8W6C1 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 118.4 0.00041118 222860000.0 491890.0 440350.0 309060.0 338460.0 509130.0 456570.0 313210.0 362450.0 374950.0 375730.0 False True 464603.8811415954 419194.92502117506 328982.50211348396 370627.1366382903 549195.6344465635 453720.3772739576 344872.3234350263 361192.7455464662 306868.5317203158 372401.32451351685 1.2475892284983856 1.1256536897896017 0.8834085177952772 0.995235817494623 1.4747413564224037 1.2183640266765194 0.9260770591660681 0.9699018821114751 0.8240264239693313 1.0 18.50649867855179 -6.7722303754541215 24.66227893130663 0.9274930724115169 1.150637146032969 0.3471855325480201 0.15263623379190472 243.93958561151263 557505.4613768187 0.06991508918589201 0.04767981442480672 1.6895444596828335e-07 6.7722303754541215 0.22314407362145205 HLLNS(ph)PTDPFNR ddPTM_KYSE-520_SHP099_60min_R1 1 HLLNSPTDPFNR 12 0 O95155-2;O95155;O95155-4;O95155-3 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 HLLNS(0.999)PT(0.001)DPFNR 109.35 0.00013897 340360000.0 241840.0 251540.0 206360.0 219300.0 229660.0 202090.0 185200.0 218630.0 285640.0 239130.0 True False 228424.65310391248 239455.64083076277 219662.29578767435 240142.2060650505 247732.93541334732 200828.6813485209 203921.82337781985 217871.62355862564 233774.9763984296 237011.49424032468 0.9637703598977975 1.0103123546740724 0.9268001811124881 1.0132091139071566 1.0452359545151482 0.8473373073834337 0.8603879066348039 0.9192449685064994 0.986344468852581 1.0 17.854597500992444 -6.256141166304802 24.998620082776906 0.9137235521401209 0.9904614168144903 0.2873549148134821 0.053550604114740864 559.1491149829291 2638243.3297138894 0.01839572816554109 0.017901322749313532 5.544454625923632e-07 6.256141166304802 0.07673786467436938 HLLS(ph)PQLVQYQCGDSGK ddPTM_KYSE-520_SHP099_60min_R1 2 HLLSPQLVQYQCGDSGK 17 0 Q9P209 Q9P209 CEP72 Centrosomal protein of 72 kDa 1 HLLS(1)PQLVQYQCGDSGK;HLLS(1)PQLVQYQCGDSGK 295.65 9.216099999999999e-38 526220000.0 188502.0 157953.0 158550.0 178643.0 133001.0 171384.0 135218.0 197137.0 215234.0 145863.0 True False 178045.4182905793 150364.70078771331 168770.38668896942 195621.1770090236 143467.42202782643 170314.32888433317 148887.1550405077 196453.1777591217 176152.93120760223 144570.76729969683 1.2315450876835228 1.040076798347522 1.167389437306551 1.3531170973416686 0.992368130207242 1.1780689282174843 1.0298565735067515 1.35887206956488 1.2184547021351504 1.0 17.14141633837645 -7.2466604338575795 24.95117592905632 1.2164975693233957 1.1426264166589384 0.021384409521883696 0.12924348745627534 2304.3440029358203 3890414.594260213 0.05901436308927036 0.03388962461832587 5.666821933046627e-08 7.2466604338575795 -0.07387115266445732 HLLTDLPLPPELPGGDLS(ph)PPDS(ph)PEPK ddPTM_KYSE-520_SHP099_60min_R1 14 HLLTDLPLPPELPGGDLSPPDSPEPK 26 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK;HLLTDLPLPPELPGGDLS(1)PPDS(1)PEPK 163.75 2.8336e-10 9972704000.0 2426681.0 2508427.0 2311522.0 2378929.0 2504388.0 2477221.0 2224622.0 2579054.0 3249055.0 2536309.0 True False 2292068.1674613594 2387918.401694313 2460526.406685966 2605021.6969089136 2701469.087581483 2461759.7448605252 2449508.501978467 2570107.8636297304 2659108.514011338 2513839.2754785437 0.9117799176023427 0.9499089400772212 0.9787922524273439 1.0362721763160503 1.0746387463722085 0.9792828717706686 0.9744093530053427 1.0223835265444627 1.0577877989057753 1.0 21.261460982056935 -4.794851100730792 2.026566086520817 1.019756911870259 0.9183198049462753 0.5867289592791984 0.030514651295182247 0.26730971105038565 2.093722540520771 0.009351694116810017 0.03386153920096884 1.6037951628031532e-05 4.794851100730792 -0.10143710692398367 HLLTDLPLPPELPGGDLS(ph)PPDSPEPK ddPTM_KYSE-520_SHP099_60min_R1 6 HLLTDLPLPPELPGGDLSPPDSPEPK 26 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 HLLTDLPLPPELPGGDLS(0.996)PPDS(0.004)PEPK;HLLTDLPLPPELPGGDLS(0.986)PPDS(0.014)PEPK;HLLTDLPLPPELPGGDLS(0.998)PPDS(0.002)PEPK;HLLTDLPLPPELPGGDLS(0.976)PPDS(0.024)PEPK;HLLTDLPLPPELPGGDLS(0.875)PPDS(0.125)PEPK;HLLTDLPLPPELPGGDLS(0.983)PPDS(0.017)PEPK 165.1 8.0152e-12 1683792000.0 833515.0 906588.0 684935.0 607665.0 641697.0 758236.0 535836.0 615335.0 829142.0 692023.0 True False 787278.2613790421 863034.1516636693 729087.0060347472 665417.2988988559 692194.9031435121 753503.5678706374 590003.5321354073 613200.5465052691 678590.7137688932 685892.2146057473 1.1478162962260356 1.258264977041245 1.0629760631615106 0.9701484937853386 1.00918903641644 1.098574312151587 0.860198613676557 0.8940188173118986 0.9893547401743712 1.0 19.387622354520957 -4.968762064798485 3.596928564710711 0.9731843457579206 1.2020133847870809 0.6505930277969676 0.06626123172402713 0.14010382142573186 3.85508988974232 0.019231884869395578 0.04216231934448511 1.0745779758885643e-05 4.968762064798485 0.2288290390291603 HLMLPDFDLLEDIESK ddPTM_KYSE-520_SHP099_60min_R1 4 HLMLPDFDLLEDIESK 16 0 P13010;C9JZ81 P13010 XRCC5 X-ray repair cross-complementing protein 5 0 ;;; 192.4 5.5326e-12 322291000.0 439586.0 395473.0 275599.0 265772.0 441883.0 348905.0 296612.0 284511.0 292213.0 292313.0 False True 415201.2882870338 376473.8834629253 293364.55251399125 291030.8909727347 476656.67812965374 346727.35447526147 326596.4356141566 283524.0977463665 239154.4852902755 289723.3342360725 1.433095782159953 1.299425482782021 1.0125679151371074 1.0045131219413512 1.6452132838608855 1.1967532935843577 1.127270043592827 0.9786029091993856 0.825458142406326 1.0 18.144316357978425 -7.11704652571248 2.1335912922477855 0.9136212041035936 1.2596313777704387 0.404342279833967 0.18060775640418075 0.3659920243612948 3.209435453845452 0.11935132919322891 0.056987137778006965 7.637539586823382e-08 7.11704652571248 0.34601017366684506 HLNEIDLFHCIDPNDSK ddPTM_KYSE-520_SHP099_60min_R1 10 HLNEIDLFHCIDPNDSK 17 0 A0A087WYT3;Q15185-4;Q15185;Q15185-3 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 0 ;;;;;;;;; 254.59 4.2164e-24 14364430000.0 10664530.0 9324390.0 6262130.0 6390610.0 10410640.0 8981180.0 7239180.0 7487360.0 7539720.0 7214730.0 False True 10072947.26168652 8876432.308205264 6665796.919562267 6997971.6529930495 11229898.13956114 8925125.124220435 7970986.96198835 7461388.095722969 6170696.908873982 7150813.105175008 1.4086436204572006 1.2413179001673857 0.9321732817682318 0.9786260037937017 1.5704365327957066 1.248127309852549 1.1146965869125829 1.043432122470548 0.8629363987164311 1.0 22.769675866614897 -7.255247019567183 2.179032996834865 0.9404543825192754 1.217940513735774 0.3047347547159236 0.17785428965887876 0.4677044290530316 4.206634643413071 0.13273642967934593 0.05581754034756638 5.555881579652343e-08 7.255247019567183 0.27748613121649857 HLNSSQPSGFGPANS(ph)LEDVVR ddPTM_KYSE-520_SHP099_60min_R1 1 HLNSSQPSGFGPANSLEDVVR 21 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 HLNSSQPSGFGPANS(1)LEDVVR 144.44 8.8404e-07 389140000.0 81346.0 199400.0 306210.0 492320.0 78571.0 136800.0 87222.0 102370.0 107380.0 126790.0 True False 76833.57522076927 189820.5246944981 325948.78655332275 539109.944778595 84754.09069216296 135946.1804566164 96039.25096468788 102014.90236333765 87882.49882951741 125666.73924112746 0.6114074072801567 1.5105072817261003 2.593755424240754 4.289997083032121 0.6744353454539636 1.0817992197264297 0.7642376299778829 0.8117892051578818 0.6993298255387194 1.0 16.93924333038825 HLPS(ph)PPLTQEVDLHSIAGPPVPPR ddPTM_KYSE-520_SHP099_60min_R1 5 HLPSPPLTQEVDLHSIAGPPVPPR 24 0 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 HLPS(0.999)PPLT(0.001)QEVDLHSIAGPPVPPR;HLPS(0.946)PPLT(0.054)QEVDLHSIAGPPVPPR;HLPS(1)PPLTQEVDLHSIAGPPVPPR;HLPS(1)PPLTQEVDLHSIAGPPVPPR;HLPS(1)PPLTQEVDLHSIAGPPVPPR 227.36 2.5163e-21 2923370000.0 994967.0 1262845.0 1209736.0 661079.0 721148.0 1050544.0 705774.0 784675.0 1078960.0 1119432.0 True False 939774.1970924595 1202176.0306310097 1287717.5182060366 723907.7493993503 777898.2448291588 1043987.1652164889 777120.523610461 781953.1455695222 883048.0623681888 1109514.703384918 0.8470137387322472 1.083515186381397 1.1606132972167524 0.6524543993791571 0.7011157603012735 0.9409403607103926 0.7004148040937307 0.7047704218645613 0.7958867599268197 1.0 20.08149735570538 -5.262115234565734 24.999319695712728 0.7722495356353487 1.0356941865500466 0.4335103301025599 0.1278679459981276 52.38041533891353 1937536.8909557601 0.03495140870228401 0.05554820705040432 5.468708383586424e-06 5.262115234565734 0.26344465091469793 HLPS(ph)PPTLDSIITEYLR ddPTM_KYSE-520_SHP099_60min_R1 2 HLPSPPTLDSIITEYLR 17 0 Q9Y4B6;Q9Y4B6-2;Q9Y4B6-3 Q9Y4B6 VPRBP Protein VPRBP 1 HLPS(0.999)PPT(0.001)LDSIITEYLR;HLPS(1)PPTLDSIITEYLR 432.69 3.9576999999999997e-118 1355240000.0 585857.0 736425.0 586181.0 440474.0 558254.0 695971.0 380826.0 618615.0 631158.0 463091.0 True False 553358.3443330245 701046.0376035391 623967.1651827616 482336.51652666327 602185.4137692369 691627.1868316651 419323.60858359403 616469.1689508264 516555.6173984028 458988.37401934655 1.205604271601224 1.5273721019652442 1.359440021799901 1.0508687013199436 1.3119840236821652 1.506851210140919 0.9135822001581229 1.3431041042552463 1.1254220076969308 1.0 18.808098085685796 -8.437664774278788 0.1445034665292125 0.7973461836880189 1.481393472826226 0.22480935336915164 0.17560264273847973 16.514898376095715 1.1981065725885627 3.291669599317083 1.788130589092189 3.6503560398848245e-09 8.437664774278788 0.684047289138207 HLQDIK ddPTM_KYSE-520_SHP099_60min_R1 1 HLQDIK 6 0 Q99733;Q99733-2;C9JZI7;H0YCI4 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 0 94.40700000000001 0.023756 313600000.0 146780.0 136600.0 99818.0 88245.0 142630.0 138000.0 90951.0 99642.0 132120.0 112220.0 False True 138637.82080132412 130037.53095921967 106252.42799444699 96631.77826817331 153854.16954631088 137138.69081149908 100145.21467622076 99296.36515861755 108130.33847416495 111225.81810583883 1.2464535946986781 1.1691308112967103 0.9552856504354112 0.8687890987344475 1.3832595000551788 1.2329753392418514 0.9003774157986041 0.8927456488935905 0.9721694145802702 1.0 16.763132184529706 -6.773509314206229 24.938721982537658 0.9323852080139193 1.1338248684923127 0.3289354486178867 0.14030352471985624 296.2004787016994 611999.3575943019 0.06384247711938006 0.043409427099176466 1.6845762976958445e-07 6.773509314206229 0.20143966047839335 HLQLAIR ddPTM_KYSE-520_SHP099_60min_R1 4 HLQLAIR 7 0 A0A0U1RRH7;A0A0U1RR32;A0A3B3IS11;P20671;P04908;Q7L7L0;Q96QV6;P0C0S8;Q93077;Q9BTM1-2;Q96KK5;Q99878;Q16777;Q6FI13;Q9BTM1;H0YFX9;P16104;C9J0D1;A0A494C189;Q71UI9-2;Q71UI9;P0C0S5;C9J386;Q71UI9-3;Q71UI9-4 A0A0U1RRH7;P16104;C9J0D1 HIST1H2AD;HIST1H2AB;HIST3H2A;HIST1H2AA;HIST1H2AG;HIST1H2AC;H2AFJ;HIST1H2AH;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;H2AFX;H2AFV;H2AFZ Histone H2A type 1-D;Histone H2A type 1-B/E;Histone H2A type 3;Histone H2A type 1-A;Histone H2A type 1;Histone H2A type 1-C;Histone H2A.J;Histone H2A type 1-H;Histone H2A type 1-J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A;Histone H2AX;Histone H2A.V;Histone H2A.Z 0 ;;; 139.92 0.0028420999999999997 5423150000.0 1717130.0 1720500.0 1582730.0 1258420.0 2087960.0 1809510.0 1381830.0 1435160.0 1348050.0 1212970.0 False True 1621877.3758862077 1637844.597476851 1684755.3082575358 1378019.8584422297 2252270.5731326886 1798216.176886347 1521518.861761192 1430181.7649288627 1103278.1015750696 1202224.0294763814 1.349064181151497 1.3623455839509384 1.4013655250189243 1.1462255159235295 1.8734200264768008 1.4957413367203656 1.2655867995117989 1.1896133581290722 0.9176975958928331 1.0 20.197274330679967 -7.357139549458528 1.8443637335409873 0.9670917294754225 1.43364804444017 0.5204567495883861 0.17748110503560896 0.3130610260281483 1.9315705524725768 0.14735390948378646 0.05411088878663722 4.394004026355037e-08 7.357139549458528 0.4665563149647475 HLQTYGEHYPLDHFDK ddPTM_KYSE-520_SHP099_60min_R1 1 HLQTYGEHYPLDHFDK 16 0 F5H5P2;P12694;P12694-2 F5H5P2 BCKDHA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial 0 244.36 1.8320999999999998e-23 259590000.0 267310.0 279870.0 175720.0 203330.0 263260.0 295120.0 236650.0 229990.0 240290.0 164550.0 False True 252481.78143072614 266424.62510656525 187047.19236194072 222654.4220666062 283977.06425549893 293278.0466107941 260572.891481431 229192.2183700693 196659.39321796186 163092.2150179627 1.5480921722898804 1.6335827254367823 1.1468799558663156 1.365205703056295 1.741205515077603 1.798234493157708 1.5977028177140884 1.4052922044429066 1.2058171703431835 1.0 17.315328393071336 -7.83063169094855 2.0250904841633828 1.010022375886846 1.5436537006865192 0.513760648890024 0.17558729554483066 0.2772631235215022 2.3023721028252484 0.186472718942355 0.05333409272351742 1.47695855610655e-08 7.83063169094855 0.5336313247996731 HLREEEEEGEK ddPTM_KYSE-520_SHP099_60min_R1 2 HLREEEEEGEK 11 1 J3KR35;Q8WUD4;S4R331;C9JUN5 J3KR35 CCDC12 Coiled-coil domain-containing protein 12 0 ; 120.86 0.00024488 49682000.0 83640.0 80881.0 59891.0 45670.0 90299.0 84224.0 61759.0 76399.0 74863.0 61693.0 False True 79000.32246779362 76995.35535514394 63751.66968898811 50010.46306881379 97405.01756897104 83698.3267746935 68002.20242975565 76133.98970066072 61269.76634265372 61146.44801642773 1.2919854714466692 1.2591958789569955 1.0426062634392184 0.8178801008257729 1.5929791627929397 1.3688174781993379 1.1121202397805028 1.2451089502403543 1.0020167700696672 1.0 15.899981074901937 -7.767082717200381 24.366988044421078 1.0010081445720278 1.2128559989163197 0.16556355698159098 0.19323751894357907 210.80338867601006 910149.0125463484 0.1779051855634506 0.05108352928986086 1.7096896507866427e-08 7.767082717200381 0.21184785434429187 HLREEEEEGEKHR ddPTM_KYSE-520_SHP099_60min_R1 4 HLREEEEEGEKHR 13 2 J3KR35;Q8WUD4;S4R331;C9JUN5 J3KR35 CCDC12 Coiled-coil domain-containing protein 12 0 ;;; 112.42 0.00021029 307423000.0 135794.0 154159.0 125771.0 103227.7 82477.7 104275.4 77253.1 94869.8 172418.0 55626.4 False True 128261.2361213721 146752.97024262347 133878.39990071498 113038.4295714602 88968.22575608044 103624.57854960446 85062.59726559948 94540.71880657774 141111.2375040765 55133.593372684314 2.3263717866958142 2.6617704608989183 2.4282545669704967 2.050264143085304 1.6136845127195962 1.8795179528592958 1.5428451523303641 1.7147570659418965 2.5594420546872865 1.0 15.750644012758048 -5.403180936100768 2.6967924134052708 1.7543932087021072 2.5025065523534344 0.45240793830525616 0.36944154989907185 0.25607009866667535 3.606546741961855 0.10736187140811099 0.1719569307314692 3.952019364307639e-06 5.403180936100768 0.7481133436513272 HLT(ph)PEPDIVASTK ddPTM_KYSE-520_SHP099_60min_R1 6 HLTPEPDIVASTK 13 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 HLT(1)PEPDIVASTK;HLT(1)PEPDIVASTK;HLT(1)PEPDIVASTK;HLT(1)PEPDIVASTK;HLT(1)PEPDIVASTK;HLT(1)PEPDIVASTK 217.68 1.2003e-10 4112300000.0 4455290.0 4929440.0 3694470.0 3221300.0 3299380.0 4181520.0 3308920.0 4154090.0 5140120.0 4297080.0 True False 4208146.182299577 4692622.303159712 3932621.4475610065 3527451.38348084 3559022.4350957554 4155421.5826239083 3643417.9255471616 4139680.4313618983 4206803.779880605 4259011.214277655 0.9880570795851484 1.1018102716960325 0.9233648961471436 0.8282324713434945 0.8356452368955266 0.9756775395879497 0.8554609843085609 0.9719815757902399 0.9877418884876299 1.0 22.022087097935472 -4.8199584917503975 8.82184218714965 0.9140699874514342 1.0446409706765065 0.351500716845773 0.06592135981504185 0.270218212509072 37.547119666109126 0.017563024924164106 0.03685327408242568 1.5137059158982772e-05 4.8199584917503975 0.13057098322507232 HLTDAYFK ddPTM_KYSE-520_SHP099_60min_R1 1 HLTDAYFK 8 0 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 84.49799999999999 0.0057301 0.0 271200.0 407440.0 409680.0 917920.0 303790.0 323800.0 356650.0 299690.0 265270.0 322460.0 False True 256155.9953762034 387865.9708200921 436088.62831117597 1005158.8408172886 327696.5446713442 321779.04409248853 392703.66256857116 298650.44533817156 217103.6549125169 319603.25527008396 0.8014811837874937 1.2135857955899794 1.3644686689522447 3.1450206599675243 1.0253229254327243 1.0068077805420532 1.2287223490158539 0.9344411873583515 0.6792911252704584 1.0 18.285922577127263 -5.952282907996 24.999962977307582 0.9857138212052992 1.6451286560320368 0.23183659088065178 0.581604875600791 189.37575562051543 99216.9103088373 0.18983691744539855 0.21525477756269962 1.1161359379381792e-06 5.952282907996 0.6594148348267377 HLTGEFEK ddPTM_KYSE-520_SHP099_60min_R1 1 HLTGEFEK 8 0 F5H018;B5MDF5;J3KQE5;P62826;H0YFC6 F5H018 RAN GTP-binding nuclear protein Ran 0 186.3 1.2125e-05 637330000.0 751460.0 1086700.0 843250.0 1931100.0 981250.0 907040.0 758940.0 749620.0 787770.0 765590.0 False True 709775.0158016292 1034493.3008300441 897607.2442477037 2114631.1633936134 1058468.7924512215 901378.826910595 835661.061740617 747019.7431826241 644730.8260656444 758807.4682200061 0.9353822221420722 1.3633146010762596 1.1829183051575534 2.7867822233669743 1.394910878953464 1.1878887130948113 1.1012820731731758 0.9844654599077242 0.8496632585575888 1.0 19.53337435233083 -6.379936591130553 2.7359198076694566 0.9942427962906174 1.5746691447543366 0.24187630674263605 0.46155979324598473 0.43796595723797044 6.36215635462781 0.1906763508522706 0.16403893282307824 4.1693025264365015e-07 6.379936591130553 0.5804263484637192 HLVYESDK ddPTM_KYSE-520_SHP099_60min_R1 1 HLVYESDK 8 0 Q15293;Q15293-2 Q15293 RCN1 Reticulocalbin-1 0 106.04 0.0017870000000000002 0.0 518560.0 483810.0 292490.0 334570.0 452080.0 494270.0 352710.0 463840.0 413550.0 446240.0 False True 489794.4430762684 460567.04138638504 311344.3734005464 366367.432207862 487656.12401666015 491185.07758985256 388365.3689178763 462231.0473010698 338459.7447471311 442286.66076946637 1.1074140066176776 1.041331521473235 0.7039424902819504 0.828348364769753 1.1025793162476627 1.1105581993707778 0.8780851953396452 1.045093800696827 0.7652497232412507 1.0 18.754622206087937 -11.5520571312348 2.1063457040201543 1.6605545318557267 0.9546396338964086 0.009275741661145753 0.14344402047934016 17985662.348542057 1006512.8310742077 58003969.91141104 0.03724048524714101 2.80506460874967e-12 11.5520571312348 -0.705914897959318 HLVYESDKNK ddPTM_KYSE-520_SHP099_60min_R1 1 HLVYESDKNK 10 1 Q15293;Q15293-2 Q15293 RCN1 Reticulocalbin-1 0 94.29700000000001 0.0029879 218870000.0 511340.0 460480.0 305640.0 389170.0 480050.0 471470.0 345080.0 432610.0 416960.0 387650.0 False True 482974.9508689812 438357.84960542904 325342.0434412904 426156.59979177325 517827.203889129 468527.3808470831 379964.05405625224 431109.3768819327 341250.57470623526 384215.72258713597 1.25704109039798 1.140915959018346 0.8467692088459663 1.1091597109098665 1.347751207062307 1.2194383345174693 0.9889341630731431 1.1220503262569161 0.8881744151655411 1.0 18.551557031530773 -7.382419560231946 1.609579013907225 0.961946943618994 1.1381445086566806 0.2125172228722494 0.13552802675751535 0.7349245376899685 3.378702420076917 0.12333111789588848 0.04381586649717383 4.1455336025663084e-08 7.382419560231946 0.17619756503768658 HLVYESDKNKDEK ddPTM_KYSE-520_SHP099_60min_R1 2 HLVYESDKNKDEK 13 2 Q15293;Q15293-2 Q15293 RCN1 Reticulocalbin-1 0 ; 170.18 9.217399999999999e-07 7424900000.0 17824300.0 18972800.0 12694600.0 12833000.0 16774400.0 16532900.0 12398900.0 14592100.0 17186900.0 10140190.0 False True 16835550.54713886 18061318.209246602 13512914.228078172 14052644.46161786 18094449.84671975 16429712.038532125 13652301.813602842 14541483.410921728 14066192.206491258 10050355.80554845 1.675119853751301 1.797082467396386 1.3445209791098305 1.3982235786975707 1.8003790310319596 1.634739342209343 1.3583898995959809 1.446862548179029 1.3995715652898384 1.0 23.260743241219107 -11.847023131991241 0.15982258487289533 3.3222266663691795e-15 1.7337352911137942 0.5911396274182283 0.14895875605459444 45.259474848116355 0.7914817571782213 16.199908169809667 0.7718478175848623 1.4222530311042307e-12 11.847023131991241 1.7337352911137909 HLVYESDQNKDGK ddPTM_KYSE-520_SHP099_60min_R1 3 HLVYESDQNKDGK 13 1 O43852;O43852-3;O43852-5;O43852-2;O43852-4;O43852-9;H0Y875;O43852-15 O43852 CALU Calumenin 0 ;; 256.95 5.366599999999999e-22 4641280000.0 6917240.0 7713830.0 5115890.0 4662200.0 7234340.0 7471090.0 4945860.0 6179590.0 6779150.0 5376090.0 False True 6533526.908023927 7343246.028105107 5445668.455113412 5105294.086258455 7803641.400235993 7424460.156049879 5445835.795742025 6158154.444617148 5548227.248464544 5328462.025134723 1.2261562299224111 1.3781173617202318 1.0219962963845513 0.9581177574648052 1.464520411973601 1.3933589319072162 1.0220277014368577 1.155709549128568 1.041243650098879 1.0 22.345287751671673 -6.790457350237455 24.97678450438878 1.067720956375231 1.234070692607609 0.2577497493169777 0.15347136909307144 372.1186038421965 320292.1401406634 0.06976253749042208 0.04704219729876111 1.6201030878414044e-07 6.790457350237455 0.16634973623237803 HLWDYTFGPEK ddPTM_KYSE-520_SHP099_60min_R1 4 HLWDYTFGPEK 11 0 F5H6T1;P61160;P61160-2 F5H6T1 ACTR2 Actin-related protein 2 0 ;;; 161.62 3.4444000000000004e-05 1828104000.0 3480540.0 3124970.0 2221110.0 2060510.0 3597610.0 3280280.0 2555230.0 2556180.0 2414330.0 2538000.0 False True 3287467.507915522 2974841.750524402 2364286.3045016495 2256340.2508850778 3880721.439399172 3259806.555761913 2813537.5850416096 2547313.2081968943 1975948.5323064716 2515515.294534124 1.306876374418691 1.182597361657205 0.9398815064408176 0.8969694025664647 1.5427143090051796 1.2958802368822935 1.1184736547438403 1.0126407156942607 0.7855044795791708 1.0 21.262422530675458 -7.354124708982577 2.750916850014713 0.8957570985310089 1.183871187694672 0.3019188558774526 0.18056738707536205 0.3921009122693108 5.654519466808971 0.1330797036218554 0.05422279730601256 4.42461300009635e-08 7.354124708982577 0.288114089163663 HLYDPK ddPTM_KYSE-520_SHP099_60min_R1 4 HLYDPK 6 0 A0A087X1X5;B4DDF4;B4DUT8;Q99439-2;Q99439;U3KPS3;H3BQH0;K7EQ72;E9PDU6;K7ER02;B7Z7E1;H3BVI6;P51911-2;Q15417-2;P51911;Q15417-3;Q15417 A0A087X1X5;Q15417-3 CNN2;CNN1;CNN3 Calponin;Calponin-2;Calponin-1;Calponin-3 0 ;;; 89.70299999999999 0.026366000000000004 6693660000.0 21426400.0 19031210.0 13388780.0 12904780.0 19903420.0 19625240.0 14386680.0 17332290.0 16871080.0 16254050.0 False True 20237834.879530545 18116922.105171397 14251842.18160544 14131246.411236402 21469705.919031285 19502751.597546842 15841026.01486613 17272168.3313769 13807717.157316938 16110051.762459561 1.2562240753744658 1.1245725570782052 0.8846552693775812 0.8771695224571364 1.3326900642902373 1.210595216273179 0.9833007521291566 1.0721361163857561 0.8570870758772087 1.0 23.941457793719938 -7.407907904584977 1.9724923885926215 0.9409912003923192 1.0977204838025467 0.15642256072733496 0.1465774502654441 0.7623701172646182 5.398117493925968 0.12765617658584297 0.045448479548312465 3.9092378533565984e-08 7.407907904584977 0.15672928341022752 HLYISS(ph)SNPDLITR ddPTM_KYSE-520_SHP099_60min_R1 1 HLYISSSNPDLITR 14 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 HLYIS(0.003)S(0.773)S(0.225)NPDLITR 155.1 7.779699999999999e-07 175160000.0 93345.0 104900.0 93060.0 114660.0 101490.0 107920.0 95710.0 107320.0 128600.0 90941.0 True False 88166.96677135592 99860.44654188996 99058.79650126459 125557.25192621403 109476.6856008912 107246.43124910849 105385.30083958492 106947.7319686763 105249.48174218604 90135.33349102747 0.9781620964450363 1.107894570022649 1.0990007210782151 1.3929859364054233 1.2145812453424722 1.1898378482150325 1.1691896702204525 1.1865239504474947 1.1676828349746229 1.0 16.459805139968548 -11.6404995209886 1.1901174435026325 6.180394078715206e-05 1.172876817931587 0.20223147531601815 0.09914426780571617 82685.96469987488 4611.069727690001 219786.39145967126 0.030729402730252584 2.288234235414769e-12 11.6404995209886 1.1728150139907998 HLYISSS(ph)NPDLITR ddPTM_KYSE-520_SHP099_60min_R1 2 HLYISSSNPDLITR 14 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 HLYISS(0.007)S(0.993)NPDLITR;HLYISS(0.311)S(0.689)NPDLITR 244.27 1.0056e-18 1187130000.0 490440.0 551200.0 503700.0 669770.0 476220.0 458630.0 499490.0 493240.0 598320.0 475130.0 True False 463234.315532099 524719.524631932 536169.3079484946 733424.7394263075 513695.8046788489 455767.5200498393 549983.3237526297 491529.06556308124 489680.1704197884 470920.7178455467 0.9836779270434036 1.1142417497206618 1.1385553610838335 1.5574272093649046 1.090832883779243 0.967822189125522 1.1678894194096894 1.0437618200613838 1.0398356917913185 1.0 18.845124668884687 -5.981432291159941 24.998644471100608 1.0515684133491272 1.205172695683633 0.20231629278853736 0.14465524137864127 419.0384686285441 564169.9403842186 0.046992539821187396 0.05327704917487729 1.0436808354875948e-06 5.981432291159941 0.15360428233450585 HLYTLDGGDIINALCFSPNR ddPTM_KYSE-520_SHP099_60min_R1 4 HLYTLDGGDIINALCFSPNR 20 0 P63244;H0Y8W2;J3KPE3;H0YAM7;H0YAF8;D6REE5;D6RAC2;D6R9L0;D6R9Z1;D6RF23;H0Y8R5 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 ;;; 184.32 1.3318e-12 818226000.0 626780.0 697591.0 469997.0 611452.0 814800.0 747868.0 485903.0 465956.0 460865.0 354451.0 False True 592011.2639450462 664077.6812545621 500293.75864178885 669564.2142402523 878920.1244221709 743200.2784044511 535022.8171962894 464339.70739094756 377183.5334612176 351310.83989870513 1.6851494366520066 1.8902851999842598 1.424077204068171 1.9059025176487876 2.5018303581967283 2.115506252578887 1.5229328458824518 1.3217346425314758 1.0736461578298364 1.0 18.42238856687194 -7.17852568250811 2.135701255589941 1.0896566999144721 1.916777193001787 0.6302732904934747 0.2716603552326538 0.24730398425820246 2.1517651711453674 0.19900723421020688 0.08967672925406138 6.629401427768969e-08 7.17852568250811 0.8271204930873148 HMDEFK ddPTM_KYSE-520_SHP099_60min_R1 2 HMDEFK 6 0 Q13753-2;Q13753 Q13753-2 LAMC2 Laminin subunit gamma-2 0 ; 132.94 0.011989 640590000.0 1098850.0 1046680.0 645330.0 763770.0 1175170.0 1209220.0 923290.0 1147090.0 879430.0 983300.0 False True 1037894.5999968334 996395.9217012892 686929.0043645075 836358.471164176 1267649.1931973512 1201672.8094426154 1016625.163642046 1143111.0125228185 719747.6806262096 974588.7269958248 1.064956500365184 1.022375792066347 0.7048398830571024 0.8581655502442098 1.3007016786505288 1.2330050370547363 1.0431324880760715 1.1729163090634802 0.7385142683158626 1.0 19.894434009504206 -4.274882100787145 7.520578738771971 1.0166311053884272 1.0653282681642096 0.006384033288371338 0.18778121133121942 1.2210945934146904 519.6781531097386 0.050091830684260596 0.24086410285182708 5.310285845720066e-05 4.274882100787145 0.0486971627757824 HMDPPPAPVQDRS(ph)PS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 HMDPPPAPVQDRSPSPR 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 HMDPPPAPVQDRS(1)PS(1)PR;HMDPPPAPVQDRS(1)PS(1)PR;HMDPPPAPVQDRS(1)PS(1)PR;HMDPPPAPVQDRS(1)PS(1)PR;HMDPPPAPVQDRS(1)PS(1)PR;HMDPPPAPVQDRS(1)PS(1)PR;HMDPPPAPVQDRS(1)PS(1)PR;HMDPPPAPVQDRS(1)PS(1)PR 109.32 0.00012963 9079310000.0 5822950.0 5700240.0 5888490.0 5661100.0 6034770.0 5263570.0 5173090.0 5664940.0 7249470.0 5277590.0 True False 5499939.355736963 5426391.91416533 6268071.487317125 6199129.241928226 6509672.065855639 5230718.107207843 5696036.421693111 5645289.645346931 5933148.9922669185 5230834.658502884 1.0514458427388145 1.0373854783088128 1.1982927958023257 1.185112825512722 1.2444805639715575 0.999977718413475 1.088934518783542 1.0792330505362728 1.1342642961620668 1.0 22.318609737900996 -6.27853446735368 24.95447961215303 1.067212278156157 1.1428302121155438 0.25758565062040306 0.0698689634253005 1398.9417400008406 2042091.6016360116 0.026514375337539364 0.02343936269817251 5.26581421619751e-07 6.27853446735368 0.07561793395938676 HMLPTVLR ddPTM_KYSE-520_SHP099_60min_R1 1 HMLPTVLR 8 0 P30153;E9PH38;B3KQV6 P30153 PPP2R1A Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform 0 97.79799999999999 0.005244899999999999 155040000.0 201130.0 182060.0 133200.0 149240.0 222600.0 198940.0 147940.0 153570.0 160650.0 154890.0 False True 189972.9179572854 173313.56432236882 141786.28512753552 163423.72472935801 240117.35357925264 197698.34166695402 162895.21895526277 153037.3015135076 131480.00965693776 153517.79510259654 1.2374651279372906 1.1289477171460331 0.9235820839713024 1.0645262630312096 1.5641011090524148 1.2877877873039503 1.0610836277735702 0.9968701114501559 0.8564480070148817 1.0 17.228046370542142 -7.087941763638655 2.9399156907202992 0.9427922281813454 1.19433739275981 0.32763877705657574 0.16042616257914077 0.3728069373866429 6.2062075468138636 0.09630477046118274 0.051646166894180334 8.166918776419563e-08 7.087941763638655 0.25154516457846454 HMYHSLYLK ddPTM_KYSE-520_SHP099_60min_R1 2 HMYHSLYLK 9 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 0 ; 99.802 0.0028419 1190190000.0 2025170.0 2334100.0 1724140.0 2053030.0 2788900.0 2518700.0 2105500.0 1837260.0 1724530.0 1334780.0 False True 1912829.7830236917 2221966.332444475 1835280.8231215384 2248149.3539340207 3008370.563329643 2502979.8590356726 2318344.487699779 1830886.9738797091 1411398.8238635447 1322954.8876431265 1.4458768026712085 1.6795480731795454 1.3872588100045737 1.6993393916395356 2.2739781918710182 1.8919616098888956 1.7523987471938376 1.3839375711000055 1.066853327385927 1.0 20.33533243632006 -9.394558901192573 10.716571086052236 0.9999947231014643 1.6415258814611973 0.2588209837744625 0.3129417594572958 0.0 0.0 0.330805012117161 0.08023200037898737 4.0312626873230354e-10 9.394558901192573 0.641531158359733 HMYVFGDFK ddPTM_KYSE-520_SHP099_60min_R1 4 HMYVFGDFK 9 0 Q9BS26 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 0 ;;; 151.44 0.00043538 1212620000.0 3431590.0 3239000.0 1965910.0 2001690.0 3647790.0 3437740.0 2601230.0 2527430.0 2456490.0 2323160.0 False True 3241232.8619949287 3083393.578161884 2092635.7041672166 2191930.015769955 3934850.319914025 3416283.789495096 2864187.713958344 2518662.935236594 2010453.3390735786 2302578.6097911284 1.4076535099442045 1.3391045869402847 0.9088226978522326 0.9519457908838949 1.708888592633527 1.4836773758638337 1.2439044216684356 1.0938444943971173 0.8731312496887786 1.0 21.134818979938245 -7.425389853113321 2.809577366219393 0.9420705233570774 1.2903469469772908 0.29388926369932 0.22363034279978966 0.40958744072428527 6.092657288392481 0.1776868665771393 0.06802959434249721 3.755001777197939e-08 7.425389853113321 0.3482764236202134 HNAQGQGNGLR ddPTM_KYSE-520_SHP099_60min_R1 1 HNAQGQGNGLR 11 0 E9PKB5;P35813-2;P35813;P35813-3;E9PL75;E9PJN3;E9PP44 E9PKB5 PPM1A Protein phosphatase 1A 0 64.73 0.053782 66656000.0 37077.0 36965.0 36556.0 48208.0 46574.0 35644.0 30540.0 35207.0 42310.0 33492.0 False True 35020.26489883291 35189.14591440381 38912.458251668024 52789.67382573626 50239.1088301892 35421.532574529556 33627.28124167715 35084.87513437557 34627.57054830395 33195.2869363817 1.0549770202603987 1.0600645200580223 1.1722284047805702 1.590276171641683 1.5134410172887418 1.0670651120568537 1.013013724090512 1.0569233879982793 1.0431471978135691 1.0 15.018690801959487 -6.4895253550949 24.184632152111764 1.0340181796347947 1.2788018976243012 0.35909627189037574 0.16235137096572383 561.9046402187961 407439.04211407545 0.06584658865671392 0.05802497617571718 3.2394750909389673e-07 6.4895253550949 0.2447837179895065 HNDIVDS(ph)DS(ph)DAEDR ddPTM_KYSE-520_SHP099_60min_R1 1 HNDIVDSDSDAEDR 14 0 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 2 HNDIVDS(1)DS(1)DAEDR 209.45 9.1184e-09 0.0 341660.0 310070.0 285530.0 316020.0 297230.0 313210.0 328840.0 335230.0 381100.0 328580.0 True False 322707.43871767534 295173.77177544124 303935.7206641528 346054.445785122 320620.309992638 311255.1402106495 362082.3563691262 334067.16537327017 311901.8467491998 325669.03683137207 0.9909061108709877 0.9063611777384875 0.9332656356321878 1.0625954777650701 0.9844973692069221 0.9557406600241647 1.1118108122652401 1.0257873104044783 0.9577264384231259 1.0 18.313047035640402 -5.239901807279386 24.113608050691653 1.0155129322417686 0.939795975063089 0.3066112192903051 0.048459271484607 613.6000833563118 686988.8063674599 0.0133293284745907 0.02305503742801315 5.755700573445017e-06 5.239901807279386 -0.07571695717867966 HNDIVDS(ph)DS(ph)DAEDRGTLSAELTAAHFGGGGGLLHK ddPTM_KYSE-520_SHP099_60min_R1 9 HNDIVDSDSDAEDRGTLSAELTAAHFGGGGGLLHK 35 1 E9PFK5;P78316-2;P78316 E9PFK5 NOP14 Nucleolar protein 14 2 HNDIVDS(0.995)DS(0.989)DAEDRGT(0.011)LS(0.004)AELT(0.001)AAHFGGGGGLLHK;HNDIVDS(1)DS(1)DAEDRGTLSAELTAAHFGGGGGLLHK;HNDIVDS(1)DS(1)DAEDRGTLSAELTAAHFGGGGGLLHK;HNDIVDS(1)DS(1)DAEDRGTLSAELTAAHFGGGGGLLHK;HNDIVDS(0.675)DS(0.717)DAEDRGT(0.298)LS(0.298)AELT(0.012)AAHFGGGGGLLHK;HNDIVDS(1)DS(1)DAEDRGTLSAELTAAHFGGGGGLLHK;HNDIVDS(0.998)DS(0.998)DAEDRGT(0.003)LS(0.001)AELTAAHFGGGGGLLHK;HNDIVDS(1)DS(1)DAEDRGTLSAELTAAHFGGGGGLLHK;HNDIVDS(1)DS(1)DAEDRGTLSAELTAAHFGGGGGLLHK 275.62 2.7041999999999997e-42 29664030000.0 3695792.0 4210464.0 3835577.0 5477790.0 3995850.0 3530484.0 3611314.0 4158970.0 5245520.0 3187306.0 True False 3490779.050381302 4008186.9894046932 4082824.4305601837 5998397.514642379 4310300.661723531 3508448.939789453 3976380.862148208 4144543.5037808996 4293065.796798381 3159068.9485265487 1.1050024887900813 1.26878743538478 1.2924138399905747 1.8987865134884596 1.364421205093969 1.1105958739602255 1.258719238781689 1.3119509486217436 1.3589655264728395 1.0 21.59106799441523 -6.020055934165606 24.42375065664093 1.2314656371989188 1.4074611750021078 0.1423383602835805 0.2137781203128923 1289.2833749812728 1570064.4745467713 0.07416267894528933 0.07516347143904702 9.548695974135243e-07 6.020055934165606 0.175995537803189 HNDLDDVGK ddPTM_KYSE-520_SHP099_60min_R1 1 HNDLDDVGK 9 0 P49588;P49588-2 P49588 AARS Alanine--tRNA ligase, cytoplasmic 0 128.03 0.0010463 474390000.0 1057300.0 1106400.0 652250.0 657700.0 1003500.0 1139700.0 770760.0 1008800.0 868330.0 857310.0 False True 998649.4613247043 1053246.883259742 694295.0786368987 720207.6102552841 1082469.7408660378 1132586.7095497514 848675.9426927018 1005300.7082556902 710663.1608179806 849714.9003770878 1.1752759200545055 1.2395297326107033 0.8170918014133721 0.8475873612851431 1.2739211003427828 1.332902022839814 0.9987772867300257 1.1831035419168903 0.8363548297230065 1.0 19.69661933826729 -7.76096553937591 24.999985725080467 0.9181774022700946 1.1038125220357307 0.16932831317668717 0.1683789218633685 24.478273266837764 1292108.582315991 0.14076782435096977 0.04575434948290417 1.733941577992482e-08 7.76096553937591 0.18563511976563607 HNGPEHWHK ddPTM_KYSE-520_SHP099_60min_R1 3 HNGPEHWHK 9 0 E5RID5;E5RK37;P00918 E5RID5 CA2 Carbonic anhydrase 2 0 ;; 134.68 0.00055453 2551210000.0 3140460.0 2640050.0 1827930.0 3025210.0 2538810.0 2484950.0 2443720.0 2907860.0 2568070.0 1338490.0 False True 2966252.4234481994 2513218.035204159 1945761.2925914095 3312725.048837444 2738599.9031470916 2469440.5053045996 2690755.066008883 2897773.3123596245 2101773.223776483 1326632.0199294633 2.235927053536605 1.8944349280351203 1.466692544248152 2.497094144473899 2.0643251949343893 1.8614359281301678 2.0282603054854276 2.184308285061368 1.5842925485005508 1.0 20.33933682198854 -8.029820419211738 3.971827749253769 1.0011303323691045 2.0147858525785267 0.6123931529026976 0.25588301658973034 0.13885863085774725 6.369099797696803 0.2477654347219882 0.0651370670507841 9.336402812893135e-09 8.029820419211738 1.0136555202094222 HNGS(ph)LSPGLEAR ddPTM_KYSE-520_SHP099_60min_R1 2 HNGSLSPGLEAR 12 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HNGS(0.738)LS(0.262)PGLEAR;HNGS(0.772)LS(0.228)PGLEAR 245.82 1.6972e-15 3851500000.0 2247470.0 2514150.0 2281450.0 3340690.0 2345640.0 2269820.0 2445390.0 2386340.0 3229780.0 2111950.0 True False 2122798.35887963 2393366.460183912 2428515.917449066 3658188.17318493 2530228.5231340416 2255653.211433023 2692593.885906512 2378062.3435159414 2643333.368128132 2093239.7660722358 1.0141209780582652 1.1433790332938474 1.1601709258590782 1.7476202356164723 1.208761922138415 1.0775895088528442 1.28632846057521 1.1360678227407022 1.2627953142167245 1.0 20.99730614107636 -9.359085918790347 0.5757018616954496 0.9734201820441178 1.2399019243610283 0.10955254699450878 0.19098762731237248 20.10928029683882 6.043935032699229 1.367848178589371 0.08623063977167776 4.3743555639149045e-10 9.359085918790347 0.26648174231691046 HNGSLS(ph)PGLEAR ddPTM_KYSE-520_SHP099_60min_R1 8 HNGSLSPGLEAR 12 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HNGS(0.111)LS(0.889)PGLEAR;HNGS(0.014)LS(0.986)PGLEAR;HNGS(0.007)LS(0.993)PGLEAR;HNGS(0.029)LS(0.971)PGLEAR;HNGS(0.001)LS(0.999)PGLEAR;HNGS(0.088)LS(0.912)PGLEAR;HNGSLS(1)PGLEAR;HNGS(0.061)LS(0.939)PGLEAR 260.14 1.6255e-21 14500800000.0 10274100.0 10987400.0 10177880.0 13048470.0 9668550.0 9731280.0 9547560.0 9560070.0 12582600.0 10263200.0 True False 9704175.19208942 10459548.811576359 10833962.429983791 14288592.665634451 10429409.87847567 9670543.471884975 10512720.540006137 9526908.348507108 10297917.02153368 10172276.032648765 0.9539826840073021 1.0282407573295858 1.0650480182813846 1.404660335580162 1.0252779068324152 0.9506764701278813 1.033467879387532 0.9365562159274586 1.0123513153282175 1.0 23.278139180539206 -5.985255056754812 24.99991653102739 0.9858407176180338 1.1174388665389108 0.21967093855499087 0.11258433708579622 379.20552344547747 642936.0890332471 0.036867176808154434 0.04178813868231639 1.0345344166391346e-06 5.985255056754812 0.13159814892087696 HNGVGGS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 1 HNGVGGSPPK 10 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 HNGVGGS(1)PPK 103.46 0.0016175 1084000000.0 1375900.0 1276100.0 1232100.0 1264200.0 1297900.0 1218500.0 1203400.0 1301400.0 1537300.0 1263800.0 True False 1299576.0842113504 1214794.2405348495 1311523.137429703 1384349.1879044117 1400037.3459591751 1210894.8895203753 1325051.4160522025 1296885.7471490446 1258165.072179336 1252603.7152215224 1.037499784184754 0.9698152941531182 1.0470375598381174 1.105177296763478 1.1177017351505933 0.9667022976266912 1.0578376863730343 1.0353519883339088 1.00443983750825 1.0 20.25649863241807 -9.378042453463687 12.621379850333167 0.9999949082085671 1.0389504205304347 0.05477261174395731 0.047133204550550936 0.0 0.0 0.04793740938629109 0.011626529548126686 4.1875262891174077e-10 9.378042453463687 0.03895551232186767 HNIICLQNDHK ddPTM_KYSE-520_SHP099_60min_R1 1 HNIICLQNDHK 11 0 F5H169;F5H5V4;F5GX23;J3KN29;O00233-2;O00233 F5H169 PSMD9 26S proteasome non-ATPase regulatory subunit 9 0 106.67 0.00078421 750010000.0 961170.0 844180.0 627900.0 630830.0 1043300.0 922070.0 731410.0 791710.0 779160.0 665560.0 False True 907851.9840551075 803624.3256599864 668375.4386755213 690783.8935340449 1125401.7744350156 916315.0191054994 805348.0606737091 788963.742796504 637684.1850252075 659663.6561978451 1.376234654623486 1.218233440799056 1.0132064005585648 1.0471759161563787 1.7060236134905198 1.3890639729751608 1.2208464921586806 1.1960091106790935 0.9666807910878061 1.0 19.331371097059666 -7.624100245413768 2.5257063621119933 0.9758230977456813 1.2796585422282145 0.28898006432915846 0.18368847351219786 0.4236892516896417 5.02453871278163 0.1758650836036426 0.05428459759034668 2.3762917191178647e-08 7.624100245413768 0.3038354444825332 HNIQFSSFDIFSDEEVR ddPTM_KYSE-520_SHP099_60min_R1 3 HNIQFSSFDIFSDEEVR 17 0 O76003 O76003 GLRX3 Glutaredoxin-3 0 ;; 257.15 3.6894999999999996e-29 438944000.0 512230.0 504204.0 359441.0 816832.0 464359.0 403110.0 436937.0 440209.0 364189.0 345764.0 False True 483815.58079481043 479981.283014367 382611.14198593434 894463.4676905039 500901.41145870666 400594.0409639381 481106.8560541809 438682.01772455283 298061.4580575817 342700.7999603216 1.4117725457624475 1.4005840752923249 1.116458269225615 2.6100419601998777 1.461628953059642 1.168932319417753 1.4038684943539208 1.2800729317683066 0.869742522025311 1.0 18.38659003395495 -7.152408550623288 1.0125884665834752 0.9606490863709518 1.5817310476167643 0.26462772360122166 0.38825097017608895 0.8239888122214227 1.5180440971836102 0.3496580258681027 0.14908074423675183 7.040304600032533e-08 7.152408550623288 0.6210819612458125 HNIVFGDYTWTEFDEPFLTR ddPTM_KYSE-520_SHP099_60min_R1 1 HNIVFGDYTWTEFDEPFLTR 20 0 H0YAL2;Q15645-2;Q15645 H0YAL2 TRIP13 Pachytene checkpoint protein 2 homolog 0 86.625 0.0032974000000000002 31248000.0 131650.0 138390.0 146360.0 120570.0 152590.0 127500.0 103750.0 130710.0 147360.0 115890.0 False True 124347.11206223158 131741.5366723749 155794.5997842798 132028.93654930763 164597.96488166275 126704.2252062763 114238.06250242324 130256.59751794327 120603.13864330118 114863.3047610556 1.0825660320404735 1.146941897122238 1.3563478789711956 1.1494440006228346 1.4329899807781752 1.1030870604833527 0.9945566405221145 1.1340140159549612 1.0499709972143485 1.0 16.809558450012712 -6.505392043952096 24.902006709222217 1.0548058848244615 1.234684017346095 0.4348938779781354 0.10254888227142153 703.5879319140105 1001949.6609598924 0.03635090580129489 0.0313548736226689 3.123258683091686e-07 6.505392043952096 0.17987813252163343 HNKPEVEVR ddPTM_KYSE-520_SHP099_60min_R1 6 HNKPEVEVR 9 1 F8WDD7;H7C0A3;F8WCF6;A0A0A6YYG9;P59998;P59998-3;P59998-2;F8WE39 F8WDD7 ARPC4;ARPC4-TTLL3 Actin-related protein 2/3 complex subunit 4 0 ;;;;; 180.07 2.5240999999999998e-05 9422910000.0 22289100.0 18220200.0 13924450.0 13439700.0 21540800.0 18248000.0 14291120.0 16768500.0 16592100.0 13300600.0 False True 21052679.19078073 17344874.242922243 14822042.326907737 14717005.047206849 23235938.40961352 18134107.463248096 15735805.87749041 16710333.987297317 13579392.892803445 13182767.03171023 1.5969848469702888 1.3157233379912088 1.1243498645811114 1.1163820927583803 1.7625994871729953 1.3755918935400862 1.1936648686606555 1.2675892661306818 1.0300866927359908 1.0 23.652149884629058 -7.575554334420852 1.3238640570556426 0.9933725428264831 1.3627399978825945 0.3413088842455696 0.18916131273862574 0.5583663373872025 1.7841753324152068 0.18453667775115376 0.0610280253082481 2.6573310710561946e-08 7.575554334420852 0.36936745505611135 HNKS(ph)PTLSCR ddPTM_KYSE-520_SHP099_60min_R1 6 HNKSPTLSCR 10 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 HNKS(0.895)PT(0.104)LS(0.001)CR;HNKS(0.97)PT(0.03)LSCR;HNKS(0.98)PT(0.02)LSCR;HNKS(0.99)PT(0.01)LSCR;HNKS(0.672)PT(0.32)LS(0.008)CR;HNKS(0.946)PT(0.052)LS(0.002)CR 182.72 3.9077e-06 27100100000.0 10896380.0 10490820.0 9850340.0 11844600.0 10752160.0 9680530.0 9834750.0 9942970.0 12815840.0 8967160.0 True False 10291936.080004985 9986825.26015814 10485308.67750126 12970307.222791158 11598293.82057817 9620110.22145973 10828942.507910427 9908480.157776654 10488806.517035589 8887717.938744918 1.1579953539185295 1.123665864397181 1.179752637264943 1.4593518057372965 1.3049799622934508 1.0824049871702204 1.2184165364545356 1.1148508791645884 1.180146196056799 1.0 23.083381601304215 -6.263932087565627 24.996507779674747 1.132545200533392 1.2466670656310779 0.2675657272163331 0.10302417667294399 380.9856136594907 3820445.1022793134 0.038475922898906875 0.03545525169683556 5.445878056445165e-07 6.263932087565627 0.11412186509768585 HNLFEDNMALPSES(ph)VS(ph)SLTDLKPPTGSNQASPAR ddPTM_KYSE-520_SHP099_60min_R1 1 HNLFEDNMALPSESVSSLTDLKPPTGSNQASPAR 34 1 Q9BZQ8 Q9BZQ8 FAM129A Protein Niban 2 HNLFEDNMALPS(0.145)ES(0.833)VS(0.524)S(0.476)LT(0.023)DLKPPTGSNQASPAR 108.14 0.00052284 92941000.0 31686.0 27234.0 27641.0 35508.0 30861.0 35231.0 41994.0 51219.0 58328.0 56200.0 True False 29928.314415524976 25925.6377609326 29422.783087163705 38882.66964413052 33289.58512492957 35011.11026072411 46239.16334194472 51041.33324360448 47737.105529224136 55702.11172293835 0.5372922765368046 0.46543366057442165 0.5282166542179277 0.6980465989787328 0.5976359619992788 0.6285418842802399 0.8301150874124444 0.9163267184103085 0.8570071053440117 1.0 15.765444402167914 -6.747672711839535 0.5449508206590115 1.0007219929604239 0.4934047705048818 0.8885406412724394 0.05826975290613211 0.28210074861307904 0.17613615566202195 0.05791477061180806 0.04785575457068857 1.7878343951040183e-07 6.747672711839535 -0.507317222455542 HNLFEDNMALPSES(ph)VSS(ph)LTDLKPPTGSNQASPAR ddPTM_KYSE-520_SHP099_60min_R1 2 HNLFEDNMALPSESVSSLTDLKPPTGSNQASPAR 34 1 Q9BZQ8 Q9BZQ8 FAM129A Protein Niban 2 HNLFEDNMALPS(0.191)ES(0.658)VS(0.334)S(0.639)LT(0.178)DLKPPTGSNQASPAR;HNLFEDNMALPS(0.138)ES(0.83)VS(0.205)S(0.821)LT(0.006)DLKPPTGSNQASPAR 106.44 0.00072942 2022460000.0 447040.0 441640.0 368720.0 528920.0 502200.0 586900.0 536270.0 795660.0 885210.0 710480.0 True False 422241.80004785367 420422.95148484514 392488.28117285925 579188.3977744034 541720.2828728692 583236.9394004993 590481.4050908389 792900.0411684404 724478.1783281536 704185.6999450765 0.5996171181561721 0.597034207763146 0.5573647422881091 0.8224938362417438 0.769286117163585 0.8282430890686779 0.8385308096101554 1.1259814580589798 1.028816941872946 1.0 19.4255964048077 -6.207034468079998 0.5890326380806483 1.0671085750051474 0.557662812039793 0.8382124418927193 0.07414232693641332 0.33569470410172986 0.2540415725986039 0.06291940533969564 0.07599635050190053 6.208197604878564e-07 6.207034468079998 -0.5094457629653545 HNLFEDNMALPSESVS(ph)SLTDLKPPTGSNQASPAR ddPTM_KYSE-520_SHP099_60min_R1 3 HNLFEDNMALPSESVSSLTDLKPPTGSNQASPAR 34 1 Q9BZQ8 Q9BZQ8 FAM129A Protein Niban 1 HNLFEDNMALPS(0.001)ES(0.006)VS(0.716)S(0.212)LT(0.064)DLKPPTGSNQASPAR;HNLFEDNMALPS(0.004)ES(0.078)VS(0.409)S(0.409)LT(0.099)DLKPPTGSNQASPAR;HNLFEDNMALPS(0.004)ES(0.053)VS(0.732)S(0.196)LT(0.015)DLKPPTGSNQASPAR 129.89 2.8768000000000003e-05 2141860000.0 402518.0 353292.0 349839.0 401444.0 247542.0 374021.0 338963.0 356405.0 440045.0 421400.0 True False 380189.5241402607 336319.32201789645 372390.1817021907 439597.1170614602 267022.14707868535 371686.59620295407 373228.6880000853 355168.71424055245 360143.9206317278 417666.72384423896 0.9102700848201767 0.8052337014603071 0.8915964821776577 1.0525069199082275 0.6393187003766819 0.8899119201594994 0.8936040787852517 0.8503639240673768 0.8622758291992559 1.0 18.671992680764294 -10.447517609200956 3.7215635132783773 1.0011868530832975 0.8649347249872308 0.14626810046659133 0.09699559027045178 132218767.94969073 2030.7963248782014 1344864.4680720193 0.022868909603732862 3.568472800163791e-11 10.447517609200956 -0.13625212809606668 HNLFEDNMALPSESVSS(ph)LTDLKPPT(ph)GSNQAS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 1 HNLFEDNMALPSESVSSLTDLKPPTGSNQASPAR 34 1 Q9BZQ8 Q9BZQ8 FAM129A Protein Niban 3 HNLFEDNMALPS(0.052)ES(0.063)VS(0.148)S(0.727)LT(0.009)DLKPPT(0.58)GS(0.58)NQAS(0.841)PAR 126.63 5.2842e-05 182450000.0 55777.0 47426.0 50091.0 80478.0 60905.0 69482.0 59421.0 62650.0 67075.0 68236.0 True False 52682.93862130714 45147.5837721227 53319.94600843371 88126.60492340697 65697.8769979532 69048.33706496072 65427.85457307462 62432.68177261993 54895.87082315025 67631.4821268047 0.7789706356357828 0.6675527779721562 0.7883894353884221 1.3030411600055611 0.9714096886827629 1.0209496360807164 0.9674171334941557 0.9231304683751075 0.8116910807931729 1.0 16.04540734995321 -5.020958452492286 24.672388655072844 0.9987405922820329 0.7244389808700478 0.495202030023674 0.1190529095195686 505.6218578041755 595221.719595457 0.032936487247438015 0.05789255536962086 9.528873192218643e-06 5.020958452492286 -0.27430161141198517 HNQGDS(ph)DDDVEETHPMDGNDS(ph)DYDPKK ddPTM_KYSE-520_SHP099_60min_R1 1 HNQGDSDDDVEETHPMDGNDSDYDPKK 27 1 B4DV59;Q9P2K3-2;Q9P2K3-4;Q9P2K3;Q9P2K3-3 B4DV59 RCOR3 REST corepressor 3 2 HNQGDS(0.962)DDDVEET(0.038)HPMDGNDS(0.983)DY(0.017)DPKK 74.561 0.0029662 436290000.0 514560.0 490370.0 450470.0 466370.0 459600.0 459880.0 469240.0 446340.0 588590.0 384050.0 True False 486016.3310500703 466811.88913962344 479508.0169774838 510693.6645807465 495767.9052337132 457009.71833617555 516675.3585410798 444791.75071653916 481716.89314644854 380647.6157863789 1.2768143314020513 1.2263623093375693 1.2597163284127486 1.341644196367041 1.302432708555149 1.2006110097183726 1.3573587147621602 1.1685131661672044 1.2655192707598362 1.0 18.538096516243474 -9.058405149604097 0.6444012577484383 0.9848191967170138 1.2766701391111634 0.6864841105105013 0.054530319592608706 2.8568526888939947 1.2850151666553298 0.16490236549791867 0.020711142970184105 8.741678909793013e-10 9.058405149604097 0.29185094239414966 HNS(ph)HDALDR ddPTM_KYSE-520_SHP099_60min_R1 6 HNSHDALDR 9 0 O95171-3;O95171-2;O95171;F2Z2X8 O95171-3 SCEL Sciellin 1 HNS(1)HDALDR;HNS(1)HDALDR;HNS(1)HDALDR;HNS(1)HDALDR;HNS(1)HDALDR;HNS(1)HDALDR 156.08 0.000126 3713095700.0 1975012.6 1540033.3 1258986.5 1288151.1 1494823.2 1372685.3 1298906.9 1323856.6 1806643.8 1304912.9 True False 1865454.7139879903 1466047.7886308883 1340142.7842396228 1410576.5932472488 1612457.2814594323 1364117.8618709408 1430213.085561722 1319264.4504450548 1478602.8277039926 1293352.386912875 1.442340643481299 1.1335254053461972 1.036177609289014 1.0906359376767982 1.2467269537486485 1.0547147673550725 1.1058185688863358 1.0200348055134685 1.1432327667738682 1.0 20.302683974857356 -4.269193645402587 3.9358665118332903 1.0926800158762549 1.4724460245717026 0.7128038877073387 0.06712641584151705 0.1230729344509633 3.929595062655616 0.016705549454721476 0.13276107835013426 5.3802982958467034e-05 4.269193645402587 0.37976600869544774 HNS(ph)HDALDRK ddPTM_KYSE-520_SHP099_60min_R1 3 HNSHDALDRK 10 1 O95171-3;O95171-2;O95171;F2Z2X8 O95171-3 SCEL Sciellin 1 HNS(1)HDALDRK;HNS(1)HDALDRK;HNS(1)HDALDRK 131.86 0.00020075 2847440000.0 2176180.0 1599110.0 1470080.0 1365150.0 1501680.0 1379760.0 1339540.0 1443450.0 1928010.0 1041720.0 True False 2055462.9572927232 1522286.3552869542 1564843.7090111633 1494893.445552686 1619853.6726095788 1371148.4060440164 1474953.7758505656 1438443.0088537617 1577931.9851769202 1032491.1712458966 1.9907801776284604 1.4743819585885918 1.5156000870427613 1.4478510685460033 1.5688789577298932 1.3280001265187242 1.4285388746431158 1.3931770545969968 1.5282764919653944 1.0 19.977698014645195 -1.0000000007351435 0.04194764127939657 9.537341499639914e-11 3.9310119266254886 0.6175293944270577 0.14312612273625375 504.2120871292488 1.6116024551166555 40.19962466969854 138.00508849566052 0.09999999983072695 1.0000000007351435 3.931011926530115 HNS(ph)ISEAK ddPTM_KYSE-520_SHP099_60min_R1 8 HNSISEAK 8 0 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 HNS(0.994)IS(0.006)EAK;HNS(0.995)IS(0.005)EAK;HNS(0.998)IS(0.002)EAK;HNS(0.972)IS(0.028)EAK;HNS(0.91)IS(0.09)EAK;HNS(0.5)IS(0.5)EAK;HNS(0.739)IS(0.261)EAK;HNS(0.74)IS(0.26)EAK 165.39 0.00017652 5147850000.0 9849800.0 8986390.0 8628010.0 10516930.0 9528760.0 8898600.0 9548930.0 9734390.0 10532650.0 9909460.0 True False 9303411.95891049 8554670.335553605 9184185.32990411 11516455.86516971 10278619.200771954 8843060.536631936 10514229.032976046 9700623.67311371 8620186.266499495 9821669.893843222 0.9472332158854568 0.8709995782810982 0.9350940755666484 1.172555786301561 1.046524604458064 0.900362222739258 1.0705133797631459 0.9876755967123888 0.8776701273480099 1.0 23.22753690371664 -5.017743762373298 24.762734899551514 1.0107165695603348 0.9075989664511123 0.2129430321022886 0.08030277942425654 937.0229572698634 1307689.3400388784 0.022319743418649854 0.039748496046169965 9.599668534866837e-06 5.017743762373298 -0.10311760310922258 HNS(ph)SDGFFNNGPLR ddPTM_KYSE-520_SHP099_60min_R1 6 HNSSDGFFNNGPLR 14 0 Q9HC44 Q9HC44 GPBP1L1 Vasculin-like protein 1 1 HNS(0.847)S(0.153)DGFFNNGPLR;HNS(0.992)S(0.008)DGFFNNGPLR;HNS(0.9)S(0.1)DGFFNNGPLR;HNS(0.697)S(0.303)DGFFNNGPLR;HNS(0.923)S(0.077)DGFFNNGPLR;HNS(0.977)S(0.023)DGFFNNGPLR 224.55 3.6492000000000004e-14 3387790000.0 2359690.0 2319860.0 2014080.0 2129180.0 1959980.0 2111140.0 2068490.0 2269500.0 2770330.0 2091510.0 True False 2228793.291774608 2208410.4434191505 2143910.8194419397 2331536.627038693 2114219.2752392814 2097963.592172378 2277593.155716987 2261627.63420528 2267307.906336157 2072980.848570157 1.0751634745260301 1.0653308470950933 1.03421641397252 1.124726563994489 1.0198932984342661 1.012051603669881 1.0987043885562 1.0910026668916128 1.0937428138325724 1.0 20.983275357358337 HNS(ph)WDTVNTVLPEDPEVADLFSR ddPTM_KYSE-520_SHP099_60min_R1 3 HNSWDTVNTVLPEDPEVADLFSR 23 0 Q8N961 Q8N961 ABTB2 Ankyrin repeat and BTB/POZ domain-containing protein 2 1 HNS(0.495)WDT(0.495)VNT(0.009)VLPEDPEVADLFSR;HNS(0.499)WDT(0.499)VNT(0.002)VLPEDPEVADLFSR;HNS(0.522)WDT(0.47)VNT(0.007)VLPEDPEVADLFSR 103.92 0.0007699 255496000.0 166513.0 182921.0 157460.0 164011.0 186905.0 172113.0 160109.0 185245.0 228890.0 177284.0 True False 157276.19195456404 174133.20058998137 167610.12354490792 179598.556128295 201613.36015602062 171038.7789249245 176294.38023325766 184602.4283315081 187329.34584734813 175713.40168486486 0.8950722622548323 0.9910069403942363 0.9538835509286318 1.0221107462844412 1.1473988792135863 0.9733963219929911 1.0033063986174189 1.0505882110380251 1.0661073318887537 1.0 17.422864704524997 -4.564443437798974 1.0831519063482176 1.0385985556745065 0.8810536640419244 0.42742002234048837 0.049052285816977056 1.116959690045799 1.5473423744270358 0.016701562786735864 0.1804931643736416 2.7261927731947293e-05 4.564443437798974 -0.15754489163258212 HNS(ph)WSSSSR ddPTM_KYSE-520_SHP099_60min_R1 1 HNSWSSSSR 9 0 H3BQ37;H3BPW9;Q96F86 H3BQ37 EDC3 Enhancer of mRNA-decapping protein 3 1 HNS(0.843)WS(0.109)S(0.046)S(0.003)SR 90.689 0.006162 0.0 137260.0 271570.0 462190.0 449690.0 152150.0 271780.0 152180.0 108800.0 158500.0 243180.0 True False 129645.91417897354 258523.36956511976 491983.50693014654 492428.4023957709 164123.3393849205 270083.72020832787 167563.8395336747 108422.59819411079 129720.39545984809 241025.6143911771 0.5378926820971079 1.0725970773610158 2.04120839261371 2.0430542357069768 0.6809373343969716 1.1205602395851189 0.6952117514851504 0.4498384890252547 0.5382017002114801 1.0 17.878826947827623 -5.7970224587213215 24.99934646388746 0.7359924546624215 1.442719174495374 0.35184964006703845 0.4491754027795983 210.0686370727304 147585.3183320036 0.15270519317948686 0.17315756783569208 1.5957966214856476e-06 5.7970224587213215 0.7067267198329525 HNT(ph)PSLLEAALTQEAST(ph)PDSQVWPTAPDITR ddPTM_KYSE-520_SHP099_60min_R1 1 HNTPSLLEAALTQEASTPDSQVWPTAPDITR 31 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 2 HNT(0.495)PS(0.495)LLEAALT(0.013)QEAS(0.158)T(0.655)PDS(0.179)QVWPT(0.004)APDIT(0.001)R 46.783 0.044253 0.0 16171.0 13850.0 12554.0 18113.0 15373.0 12641.0 11526.0 14194.0 16823.0 16577.0 True False 15273.962393910699 13184.625210726163 13363.2509271102 19834.45407412798 16582.767639595022 12562.102830059137 12691.160562919807 14144.764326904504 13768.367273318783 16430.140676710853 0.9296306522536963 0.8024657530422065 0.8133375842637878 1.207199284802389 1.0092894495480804 0.7645767055339627 0.7724316433217813 0.8609034216581122 0.8379944849063259 1.0 14.004057212407385 -6.258320338845681 24.978211113354337 0.8338158647929492 0.9504872657065665 0.15360351123809934 0.12142677434201848 535.2115134807781 4286142.944514442 0.044107729555255624 0.042321768108031 5.5167037299416e-07 6.258320338845681 0.11667140091361727 HNT(ph)PSLLEAALTQEASTPDSQVWPTAPDITR ddPTM_KYSE-520_SHP099_60min_R1 1 HNTPSLLEAALTQEASTPDSQVWPTAPDITR 31 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 HNT(0.862)PS(0.138)LLEAALTQEASTPDSQVWPTAPDITR 109.85 0.00047219 39294000.0 24565.0 31046.0 17480.0 25150.0 22196.0 22604.0 16249.0 21151.0 24416.0 25142.0 True False 23202.330480886558 29554.503559003933 18606.788768988878 27540.248438376777 23942.69892203545 22462.92005147194 17891.60749495784 21077.632117680514 19982.66987727227 24919.261440180024 0.931100246954949 1.1860104132681077 0.7466829951463625 1.105179160485497 0.9608109365324145 0.9014280020054103 0.7179830565166455 0.845836950997864 0.8018965540066949 1.0 14.604973689790198 -6.388356310299893 3.2835141570622883 0.8272436873062052 0.9910159233353599 0.22043995579200815 0.1260712740353724 0.343866059233206 6.941998685685998 0.045324669031950884 0.03909703326119088 4.0892502575035303e-07 6.388356310299893 0.1637722360291547 HNVEVLGILSDDVETDTVAPGENLK ddPTM_KYSE-520_SHP099_60min_R1 4 HNVEVLGILSDDVETDTVAPGENLK 25 0 H3BR35;P15170;P15170-2;P15170-3 H3BR35 GSPT1 Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 0 ;;; 201.16 2.238e-15 2111420000.0 2876490.0 2135800.0 1354860.0 3022020.0 2312440.0 2010460.0 2147760.0 2527080.0 1763080.0 1682830.0 False True 2716925.365559347 2033192.962098839 1442196.4434526456 3309231.8721965537 2494415.8720162017 1997911.9733977288 2364876.540917634 2518314.149304908 1442949.1156299626 1667921.4354219306 1.6289288619113238 1.218998040866659 0.8646668918718081 1.9840454124024278 1.4955236014370152 1.1978453726702787 1.4178584738431617 1.509851780679259 0.8651181554393435 1.0 20.66961990403206 -7.764244656509667 24.995183616790182 0.9325588582382867 1.404403118355847 0.3214275542498759 0.27990238957920643 92.97550541448896 828340.5049207067 0.23702818745751644 0.07175323337260499 1.7208988465255225e-08 7.764244656509667 0.4718442601175603 HPAKPDPSGECNPDLR ddPTM_KYSE-520_SHP099_60min_R1 1 HPAKPDPSGECNPDLR 16 1 E9PC52;Q16576;Q16576-2;Q5JP01 E9PC52 RBBP7 Histone-binding protein RBBP7 0 115.87 0.00018018 778590000.0 934320.0 873530.0 830170.0 725900.0 792130.0 857330.0 794680.0 853830.0 980580.0 714840.0 False True 882491.4070792553 831564.3076047383 883684.0865189638 794889.317750206 854466.1243968267 851979.0854595832 875014.0097294033 850868.2630154194 802531.3904102076 708507.073737105 1.2455647089371307 1.1736852579587571 1.2472480787776286 1.121921498338002 1.2060093061454464 1.202499053348498 1.2350109718933893 1.2009312179868767 1.1327076611630142 1.0 19.43442273152435 -8.09995508858228 2.457063567460966 1.0002555403031643 1.2029997217024304 0.7606639553075201 0.03507372317482969 0.19319953714408064 2.5173894394600165 0.032621397307905524 0.008867794729617537 7.94410382329866e-09 8.09995508858228 0.2027441813992661 HPDIY(ph)AVPIK ddPTM_KYSE-520_SHP099_60min_R1 2 HPDIYAVPIK 10 0 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 HPDIY(1)AVPIK;HPDIY(1)AVPIK 90.906 0.006089 913590000.0 4035500.0 3188500.0 3322800.0 3309300.0 3609600.0 3485600.0 3194000.0 3421100.0 3727600.0 4031500.0 True False 3811642.7704301905 3035319.673963927 3536993.004667977 3623814.8770226785 3893654.984185399 3463845.07748233 3516880.690436047 3409233.0025907415 3050761.8051490854 3995784.046459539 0.9539161091069207 0.759630560278494 0.8851812218935923 0.9069095914313879 0.9744407953266065 0.8668749454944812 0.880147838207667 0.8532075214654029 0.7634951663246692 1.0 21.93004718360546 -4.958332871387634 24.999550431207254 0.888538320506131 0.8481815157599258 0.029313022868684646 0.0752231869263162 507.0066833780605 304190.1585086721 0.01936683163036774 0.040315198927034765 1.100695342027411e-05 4.958332871387634 -0.04035680474620518 HPDSHQLFIGNLPHEVDK ddPTM_KYSE-520_SHP099_60min_R1 1 HPDSHQLFIGNLPHEVDK 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 0 166.6 1.2229000000000002e-08 352010000.0 209520.0 249050.0 157920.0 285440.0 253470.0 231680.0 248260.0 245240.0 201860.0 231870.0 False True 197897.50793223496 237085.26416832852 168099.7758809339 312568.1317793349 273416.6469529795 230233.9991826678 273356.5435841115 244389.31967944605 165207.31247649816 229815.81219213005 0.8611135415120574 1.031631644084268 0.7314543515413098 1.3600810527259215 1.1897207783265948 1.0018196615217587 1.1894592498952188 1.063413858899893 0.7188683446132156 1.0 17.810118538680072 -5.2370551609320115 24.998069376794906 1.0839376554605313 0.8904230652529385 0.22063048982625255 0.17091981107734075 1283.4212009309642 1315728.9407658312 0.04700558312816779 0.08136882909582288 5.793551062741916e-06 5.2370551609320115 -0.19351459020759287 HPDSHQLFIGNLPHEVDKSELK ddPTM_KYSE-520_SHP099_60min_R1 1 HPDSHQLFIGNLPHEVDKSELK 22 1 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 0 147.35 2.8043e-06 815720000.0 874320.0 1031900.0 747230.0 1332800.0 916860.0 754570.0 860310.0 846780.0 879530.0 700170.0 False True 825819.7266862915 982325.975086522 795397.6414102712 1459468.9112790695 989011.6657802046 749860.4487364697 947278.5306164785 843842.7178199384 719829.5231470058 693967.038524018 1.1899984881741759 1.4155225256458979 1.146160548348209 2.103081025841197 1.4251565432901683 1.0805418803915097 1.3650194865612388 1.2159694495212445 1.0372675980086807 1.0 19.40450761492443 -6.184985233371078 6.383102520141989 1.1678839022341254 1.4749932613912224 0.2643621457125275 0.2613009174628966 0.3728405624503671 25.469215581736258 0.08920163186347152 0.08910879747520488 6.531527603910107e-07 6.184985233371078 0.30710935915709703 HPELADK ddPTM_KYSE-520_SHP099_60min_R1 4 HPELADK 7 0 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;A0A2R8Y6L3;S4R435;Q9NQ39 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 0 ;;; 95.90899999999999 0.010412000000000001 1892690000.0 4075200.0 4020020.0 2633830.0 2277840.0 3568010.0 3898160.0 2780570.0 3423000.0 3217790.0 3618450.0 False True 3849140.5322902063 3826892.205026958 2803610.8960770005 2494325.228742433 3848792.087800128 3873830.137490966 3061657.1513480786 3411126.411934204 2633520.4498848254 3586393.348111499 1.0732622327433947 1.0670586947865324 0.7817354718085535 0.695496836691346 1.0731650753888446 1.0801464762728337 0.8536869367550738 0.9511300297638612 0.7343088708525428 1.0 21.774102297979034 HPELTKPPPLMAAEPTAPLSHSASSDPADRLS(ph)PFLAAR ddPTM_KYSE-520_SHP099_60min_R1 2 HPELTKPPPLMAAEPTAPLSHSASSDPADRLSPFLAAR 38 2 Q9ULP9-2;Q9ULP9 Q9ULP9-2 TBC1D24 TBC1 domain family member 24 1 HPELTKPPPLMAAEPTAPLS(0.002)HS(0.033)AS(0.175)S(0.175)DPADRLS(0.616)PFLAAR;HPELTKPPPLMAAEPTAPLSHSASSDPADRLS(1)PFLAAR 190.83 1.031e-15 1652820000.0 522480.0 836470.0 780100.0 1882740.0 768480.0 674810.0 734790.0 641350.0 818970.0 609800.0 True False 493496.99286194256 796284.7256329322 830386.4942041307 2061675.0435335778 828955.0039469192 670598.2604819399 809069.7440593304 639125.3065422158 670265.69255364 604397.6464172212 0.8165104476950215 1.3174848220425557 1.373907557593147 3.4111235471462855 1.3715390998969643 1.1095315550236604 1.338638144697245 1.057458298077193 1.1089813081286382 1.0 19.205138516956737 -5.989955404445817 24.999957570744456 1.1511661312940211 1.7644456420110204 0.16724917892952673 0.6350365608527543 410.79349609537627 1022415.2070491735 0.2090771087456846 0.23682178518642588 1.023398074576397e-06 5.989955404445817 0.6132795107169993 HPEPVPEEGS(ph)EDELPPQVHKV ddPTM_KYSE-520_SHP099_60min_R1 4 HPEPVPEEGSEDELPPQVHKV 21 1 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV;HPEPVPEEGS(1)EDELPPQVHKV 160.67 3.4136e-09 2901940000.0 1098160.0 1079190.0 962510.0 973300.0 1077860.0 992430.0 899180.0 948560.0 1204380.0 1007870.0 True False 1037242.8756723147 1027344.0925027861 1024554.9346704513 1065802.139366685 1162681.4498155143 986235.8762467824 990077.8895511221 945269.6667555684 985694.9519490986 998941.0559109951 1.0383424222427116 1.0284331457033653 1.025641031177858 1.066931960659796 1.1639139696337681 0.9872813519986661 0.9911274380931414 0.9462717155953906 0.9867398542851794 1.0 19.930040026474767 -6.485925771305034 24.998102586338078 0.9783640659376353 1.0620994658096186 0.5278034179720743 0.03892001024200409 488.379403591928 330381.41306464997 0.01458132818966388 0.012855726008738966 3.266436566449322e-07 6.485925771305034 0.08373539987198331 HPGCTT(ph)PVTVK ddPTM_KYSE-520_SHP099_60min_R1 3 HPGCTTPVTVK 11 0 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5;Q96Q89-4 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 1 HPGCT(0.078)T(0.922)PVT(0.001)VK;HPGCT(0.048)T(0.952)PVTVK;HPGCT(0.248)T(0.752)PVTVK 198.55 0.001309 1027200000.0 3373790.0 3383520.0 2899310.0 2272680.0 2490410.0 3249800.0 2562300.0 2790860.0 3328780.0 3415130.0 True False 3186639.1432163734 3220970.620432939 3086204.1616600156 2488674.8238938423 2686391.098505424 3229516.7927479 2821322.289638162 2781179.158051618 2724357.463715036 3384874.6051309346 0.9414349170825803 0.9515775312770691 0.9117632177516467 0.7352339788662791 0.7936456772824848 0.954102343363758 0.8335086580050806 0.821649095607793 0.8048621534119287 1.0 21.690670958543468 -5.01502136619349 23.626409422591006 0.8414964822183008 0.9427973167111853 0.229751149335089 0.07298192290148049 426.6595790442298 671079.4428150727 0.019406524712261147 0.0352284375910838 9.660033528914368e-06 5.01502136619349 0.10130083449288452 HPHDIIDDINSGAVECPAS(ph) ddPTM_KYSE-520_SHP099_60min_R1 1 HPHDIIDDINSGAVECPAS 19 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 1 HPHDIIDDINSGAVECPAS(1) 65.107 0.034098 0.0 59615.0 65054.0 65798.0 62856.0 63864.0 58180.0 64926.0 48225.0 82081.0 72802.0 True False 56308.03711044382 61928.70819195523 70039.44436052226 68829.81534165444 68889.73346354622 57816.87703922479 71489.35369669726 48057.71873079963 67177.15949362656 72157.0309190989 0.7803541303352036 0.8582491186671541 0.9706530807656035 0.9538892394120972 0.9547196244920898 0.8012646349604929 0.9907468861468228 0.6660157453634842 0.9309856383772819 1.0 16.13885235608041 -9.152991211518154 14.317920827380131 1.000005976691359 0.8798874301578954 0.12079899381946091 0.09824108615662638 0.0 0.0 0.0938248520361796 0.022755869132536282 7.030865475590554e-10 9.152991211518154 -0.12011854653346354 HPHVANPR ddPTM_KYSE-520_SHP099_60min_R1 1 HPHVANPR 8 0 Q5JVF3-3;Q5JVF3-2;Q5JVF3;Q5JVF3-4 Q5JVF3-3 PCID2 PCI domain-containing protein 2 0 63.48 0.052138 55942000.0 9684.8 14645.0 21826.0 8729.9 8394.0 17556.0 10077.0 11257.0 13891.0 9273.7 False True 9147.56483782984 13941.432217406847 23232.938882834736 9559.587071259863 9054.560044673171 17446.42649193246 11095.6815020426 11217.95209440355 11368.744563613578 9191.542232829424 0.9952154498248933 1.5167674655959524 2.527643163065026 1.0400416849651077 0.985096930995215 1.8980956677345258 1.207162108488406 1.220464619564756 1.2368701873563548 1.0 13.166091233769695 -7.449793678201361 0.5291799082037513 1.0010115307434533 1.543256100210541 0.10269525089911424 0.4484283910522471 2.003492629224832 1.3249668004778832 0.4808560127984447 0.28349952629968306 3.5498199171761704e-08 7.449793678201361 0.5422445694670877 HPKGEEGS(ph)DDDETENGPKPK ddPTM_KYSE-520_SHP099_60min_R1 5 HPKGEEGSDDDETENGPKPK 20 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 HPKGEEGS(1)DDDETENGPKPK;HPKGEEGS(1)DDDETENGPKPK;HPKGEEGS(1)DDDETENGPKPK;HPKGEEGS(1)DDDETENGPKPK;HPKGEEGS(1)DDDETENGPKPK 217.89 4.924000000000001e-19 7950870000.0 5590030.0 5233050.0 5446390.0 4207950.0 4489290.0 4608760.0 3635080.0 3809120.0 6400980.0 3557870.0 True False 5279939.89245147 4981646.423031812 5797473.01393211 4607872.302833695 4842571.582433982 4579995.0193072865 4002549.361362016 3795907.051775288 5238723.387574639 3526350.039780974 1.4972818446518752 1.4126919808962664 1.6440435431906806 1.3066973643716595 1.3732532300550515 1.2987919428417707 1.1350402870415608 1.0764407982626298 1.4855936955992102 1.0 21.749744258840774 -5.9873746905288 1.070582834182177 1.182028257982113 1.502277815823679 0.47827221812822573 0.13926693988288633 0.44774764308824616 1.095342266939225 0.06554896117781756 0.07775792417067211 1.029497531156039e-06 5.9873746905288 0.32024955784156584 HPLLSSGGPQS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 2 HPLLSSGGPQSPLR 14 0 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 HPLLSSGGPQS(1)PLR;HPLLSSGGPQS(1)PLR 147.1 2.476e-06 748130000.0 260240.0 503490.0 426590.0 397100.0 400970.0 265390.0 365800.0 304980.0 526420.0 284660.0 True False 245803.96842442147 479301.5846461024 454088.67396813264 434840.26460753183 432524.05779278046 263733.60256857786 402778.6338639659 303922.09556286683 430835.3979682854 282138.133862129 0.8712185235638413 1.6988188660818189 1.609455155005845 1.5412318025043117 1.5330223244623138 0.9347676578078424 1.427593740521406 1.0772102707370386 1.5270371008366403 1.0 18.106042148568942 -6.21888461790076 24.9980325583046 1.21278913695711 1.478374825186226 0.18030643852000405 0.2696670988931633 809.1355661934533 475312.194894391 0.08550756425251708 0.08550693783503431 6.041091060143535e-07 6.21888461790076 0.2655856882291161 HPNYS(ph)PPGS(ph)PIEK ddPTM_KYSE-520_SHP099_60min_R1 1 HPNYSPPGSPIEK 13 0 Q9UHF7;Q9UHF7-3;Q9UHF7-2;E5RFF3;H0YAV4 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 2 HPNY(0.037)S(0.967)PPGS(0.995)PIEK 73.156 0.020174 433230000.0 443720.0 442560.0 353630.0 448340.0 442500.0 537130.0 483740.0 571960.0 620660.0 532710.0 True False 419105.9670661091 421298.7533038969 376425.5556280054 490950.09880166344 477322.2325194041 533777.5724317427 532641.1600474432 569976.0042564671 507963.7895653595 527990.6038421089 0.79377542709347 0.7979285052388598 0.7129398759917559 0.9298462798941739 0.9040354677640121 1.0109603628313135 1.0088080283465142 1.0795192189194973 0.9620697525088189 1.0 19.010152729946654 -5.699651866944254 1.3202520594883 1.018037800709486 0.7696087846284618 0.8229192670069705 0.04682851013879891 0.16332690869356725 0.594615434325465 0.01755476809018078 0.026499203781226794 1.9968623704026087e-06 5.699651866944254 -0.24842901608102408 HPPDEDFRGPPDEDFRHPPDEDFR ddPTM_KYSE-520_SHP099_60min_R1 2 HPPDEDFRGPPDEDFRHPPDEDFR 24 2 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 0 ; 73.389 0.0081977 1381510000.0 674930.0 802250.0 715390.0 700210.0 764540.0 657880.0 697080.0 784620.0 847570.0 642140.0 False True 637490.2874604008 763708.7057981994 761505.1840644708 766757.7478741871 824704.9483624523 653773.9268918051 767547.6492451979 781898.3363516852 693672.6535009694 636451.1391773596 1.0016327227953183 1.1999486822905614 1.1964864813483544 1.2047393753827738 1.29578674244879 1.0272177809860408 1.2059804783086507 1.2285284576005666 1.0899071598765162 1.0 19.27969023605397 -8.004821252372023 5.459153316063871 1.000118213659308 1.1733374353560546 0.2861272152496528 0.08497891982749234 0.1684331760670116 20.491627861955013 0.08021717933848778 0.02086241712672289 9.889600486862947e-09 8.004821252372023 0.17321922169674653 HPPLYQAGLTPPLS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 3 HPPLYQAGLTPPLSPPK 17 0 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 HPPLYQAGLTPPLS(1)PPK;HPPLYQAGLTPPLS(1)PPK;HPPLYQAGLTPPLS(1)PPK 131.65 2.0559e-05 2977700000.0 1198130.0 1300310.0 986020.0 849500.0 853240.0 1260330.0 1008100.0 1272240.0 1450400.0 1315510.0 True False 1131667.340487059 1237841.1557949 1049580.4268877816 930236.2245885126 920385.133728488 1252463.8129743228 1110008.586107882 1267826.8963830469 1187043.9216086057 1303855.604851293 0.8679391615731311 0.9493698160971421 0.8049821030661506 0.7134503399972788 0.7058949858435126 0.9605847521107742 0.8513278479440831 0.9723675625320833 0.9104105678511771 1.0 20.314352676853584 -6.287083843643602 24.978784998032502 0.9317354837115817 0.8107061784922216 0.42614361126438105 0.0755271533610725 909.6771289923919 886060.5929270713 0.02945746006799424 0.025987949592559453 5.163166810361559e-07 6.287083843643602 -0.12102930521936006 HPQGEQMYR ddPTM_KYSE-520_SHP099_60min_R1 6 HPQGEQMYR 9 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;;;; 133.83 0.00086534 6076290000.0 208685.0 207838.0 233439.0 185515.0 181356.0 213118.0 196344.0 199279.8 281404.0 165458.0 False True 197108.82704676597 197853.15050880206 248486.8514556059 203146.28982288137 195627.685425512 211787.85150989203 216192.36765277848 198588.54488605514 230308.12721755911 163992.17084437612 1.2019404708888 1.2064792452595743 1.5152360638692493 1.2387560258328514 1.1929086883736486 1.2914509907358482 1.3183090786568028 1.2109635713921367 1.4043848924721836 1.0 17.323267415172804 -10.09796936847381 4.337932490857057 0.9999717817929457 1.2857467866752115 0.43125803448397626 0.09877225545271473 14085513.710322743 16394342.567925649 3723.42749983705 0.0237410304230764 7.980509731712798e-11 10.09796936847381 0.2857750048822658 HPQHLHQQHHGDAAQHTR ddPTM_KYSE-520_SHP099_60min_R1 6 HPQHLHQQHHGDAAQHTR 18 0 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 0 ;;;;; 198.96 5.1127e-13 2966270100.0 21503.17 20144.2 27002.4 52093.2 20429.19 19663.11 37430.100000000006 23201.0 28106.3 3695.7 False True 20310.34629459333 19176.44239493935 28743.017909367583 57044.122065608295 22036.85102680923 19540.385236829694 41213.89979057305 23120.5211461541 23002.904422164862 3662.9589732110903 5.544792186626241 5.235232645297292 7.8469396243797815 15.573235322262217 6.016133729035704 5.33459025332731 11.251531915041726 6.311979281025297 6.279869523627133 1.0 11.83879382696535 -8.228396575044544 1.4557974682870696 1.0202992401205042 8.082029058509017 0.3148062737466941 3.07771651024017 1.0560110337101338 4.08226979888659 3.071155180681814 0.9016869802811555 5.910216975375419e-09 8.228396575044544 7.061729818388512 HPVSEYK ddPTM_KYSE-520_SHP099_60min_R1 1 HPVSEYK 7 0 Q8NBJ5 Q8NBJ5 COLGALT1 Procollagen galactosyltransferase 1 0 117.17 0.0028811 0.0 356780.0 324430.0 171900.0 216670.0 306590.0 277200.0 259050.0 277630.0 231960.0 267020.0 False True 336988.70217670256 308843.8958206419 182980.94904972462 237262.25165578915 330716.8887415229 275469.89197788073 285237.3020843639 276666.966329329 189841.9112357502 264654.4105384167 1.27331602557134 1.1669705227746836 0.6913958043527995 0.8964983850943555 1.249617900070918 1.040866431877938 1.0777727131169779 1.0453895922855538 0.7173200357762151 1.0 18.013750171518915 -4.5379096904893474 24.99832484502231 0.9775031051395866 1.2467298220175669 0.3015192958027407 0.15813009218104485 256.53083069578264 426642.15402517444 0.04207788382943145 0.11141240666224479 2.8979461394251752e-05 4.5379096904893474 0.2692267168779803 HPWDDISYVLPEHMS(ph)M ddPTM_KYSE-520_SHP099_60min_R1 2 HPWDDISYVLPEHMSM 16 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 HPWDDISYVLPEHMS(1)M;HPWDDISYVLPEHMS(1)M 117.07 0.00011357 99330000.0 152879.0 167748.0 131651.0 135915.0 151531.0 149677.0 125817.0 132083.0 159333.0 137281.0 True False 144398.49711326894 159689.13428511872 140137.4341090476 148832.32073566533 163455.6276065488 148742.8103231358 138535.81021558936 131624.83490140396 130402.14365806954 136064.7971430019 1.0612480240683302 1.1736256374768856 1.0299315991465847 1.0938341427080875 1.2013072524170936 1.0931762913430836 1.0181605611772637 0.9673687659495673 0.9583826705817156 1.0 17.053934333663094 -6.854897644637406 2.9028839323654263 0.974362357880205 1.1128735313269007 0.6258382287710273 0.04749386975544345 0.17265375477278955 2.92607038630243 0.022583238830007558 0.01444869507826434 1.3966974986335572e-07 6.854897644637406 0.13851117344669572 HQADACHAYQIIHR ddPTM_KYSE-520_SHP099_60min_R1 2 HQADACHAYQIIHR 14 0 G3V4P5;G3V3Z4;G3V2T4;G3V4E4;Q99538-3;Q99538-2;Q99538 G3V4P5 LGMN Legumain 0 ; 137.81 3.7643e-06 144513000.0 63204.0 129388.0 221690.0 30437.0 45910.0 87792.0 39231.0 43705.0 35354.0 56840.0 False True 59697.948125949704 123172.00626465239 235980.49211654122 33329.72332878225 49522.85580783239 87244.05756321116 43196.85233766329 43553.39755582371 28934.604801813708 56336.441820850814 1.0596684170396924 2.1863646741542153 4.1887716811607705 0.5916192477112836 0.8790554427507946 1.5486256274516979 0.7667657193372053 0.7730945751654492 0.5136036971206913 1.0 15.781780826302406 -5.317748300784578 24.999991013856352 0.8827424908721515 2.4490888823288444 0.48722472540466577 0.7569457753082945 240.9731428846361 106986.50195094493 0.2167409805378103 0.32147895105800844 4.811181039248086e-06 5.317748300784578 1.5663463914566929 HQAFEAELHANADR ddPTM_KYSE-520_SHP099_60min_R1 1 HQAFEAELHANADR 14 0 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 140.22 6.6276e-06 932150000.0 277430.0 255830.0 181130.0 186110.0 245910.0 212400.0 164600.0 228440.0 249830.0 190470.0 False True 262040.40485700616 243539.54279134094 192805.9296182468 203797.83844398792 265261.7179634951 211074.3328142204 181239.3743411938 227647.59495829698 204467.16970179125 188782.58398341754 1.3880539153973201 1.2900530210601058 1.0213120593538578 1.0795372864579993 1.405117529203835 1.118081596090246 0.960042873219246 1.2058718031865339 1.0830828002637756 1.0 17.526366150366908 -4.585698220658903 5.3757227797196965 1.1215075596550927 1.3664243672421807 0.38023883139460557 0.11934952375963165 0.19195076902184596 10.636942730063884 0.031486775060742433 0.0892906230431315 2.5959826127508202e-05 4.585698220658903 0.244916807587088 HQAS(ph)DS(ph)ENEELPKPR ddPTM_KYSE-520_SHP099_60min_R1 7 HQASDSENEELPKPR 15 1 Q96ST2;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 HQAS(1)DS(1)ENEELPKPR;HQAS(1)DS(1)ENEELPKPR;HQAS(1)DS(1)ENEELPKPR;HQAS(1)DS(1)ENEELPKPR;HQAS(1)DS(1)ENEELPKPR;HQAS(1)DS(1)ENEELPKPR;HQAS(1)DS(1)ENEELPKPR 114.4 0.00011504 14027000000.0 19119300.0 15932200.0 13983200.0 17161700.0 16676800.0 17153900.0 17113600.0 18740100.0 18546300.0 17170800.0 True False 18058714.315620366 15166793.197280265 14884579.445911039 18792742.808146764 17989169.281987794 17046836.147183858 18843609.700640693 18675094.96707224 15178759.43417656 17018680.07068025 1.061111334170497 0.8911850469185086 0.8746024594207024 1.104242087523748 1.0570249400821337 1.0016544218697734 1.1072309733998953 1.0973292223317401 0.8918881705947631 1.0 24.02061581349588 -5.2620064194616525 24.999953687968368 1.0433895414578955 0.937188157760692 0.23914660621834105 0.07670823233512772 64.83631856580452 2858584.543018066 0.02106759388173332 0.03346446448825489 5.470078773156582e-06 5.2620064194616525 -0.10620138369720356 HQAS(ph)DS(ph)ENEEPPKPR ddPTM_KYSE-520_SHP099_60min_R1 6 HQASDSENEEPPKPR 15 1 Q96ST2;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 HQAS(1)DS(1)ENEEPPKPR;HQAS(1)DS(1)ENEEPPKPR;HQAS(1)DS(1)ENEEPPKPR;HQAS(1)DS(1)ENEEPPKPR;HQAS(1)DS(1)ENEEPPKPR;HQAS(1)DS(1)ENEEPPKPR 138.03 8.6224e-06 5058380000.0 7230020.0 6423820.0 5443380.0 6464690.0 6576550.0 6641910.0 7015410.0 7008410.0 7136120.0 6198810.0 True False 6828956.37791246 6115210.044849608 5794268.984515939 7079092.193920082 7094087.069549122 6600455.3759985855 7724596.106603621 6984099.461485194 5840380.494945946 6143893.366001209 1.111503076486031 0.9953314096708892 0.9430940023438549 1.1522159927276787 1.1546566072917297 1.0743115127166558 1.257280301990531 1.1367546676726972 0.9505992612543003 1.0 22.550721746047913 -5.274380701694636 24.62151180705609 1.1166857559692505 1.014511682870136 0.1541510393409704 0.08985841264073857 961.8521231369456 1829969.5575477616 0.02541678127265467 0.037982888452820635 5.316420185886472e-06 5.274380701694636 -0.10217407309911453 HQDRLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 HQDRLSPK 8 1 Q8IVM0-2 Q8IVM0-2 1 HQDRLS(1)PK;HQDRLS(1)PK 72.152 0.013409 3857200000.0 3263900.0 2783400.0 2596900.0 2983500.0 2508000.0 2490800.0 2554800.0 2546500.0 3604100.0 2098200.0 True False 3082844.960576661 2649681.286031425 2764300.3291869094 3267050.94297802 2705365.331432009 2475253.993284654 2813064.1164452126 2537666.7858575685 2949686.2919674376 2079611.5803748963 1.4824138265381794 1.2741231636889427 1.3292387651970003 1.5709909359078782 1.3008993395508535 1.19024822550682 1.3526872724656087 1.2202599801834617 1.4183832787830941 1.0 20.98788266336586 -5.985668362964127 24.88047371782738 1.2560461475794347 1.4028470387058782 0.2939111837334305 0.12784903402992243 330.1602900320864 573172.199083634 0.03810796183188857 0.043191474220724564 1.0335503467911157e-06 5.985668362964127 0.14680089112644357 HQDVPS(ph)QDDSKPTQR ddPTM_KYSE-520_SHP099_60min_R1 4 HQDVPSQDDSKPTQR 15 1 Q9NRN7 Q9NRN7 AASDHPPT L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 1 HQDVPS(0.997)QDDS(0.003)KPTQR;HQDVPS(1)QDDSKPTQR;HQDVPS(1)QDDSKPTQR;HQDVPS(1)QDDSKPTQR 178.77 7.0827e-09 2979700000.0 2513720.0 2307750.0 2228800.0 2220530.0 2599860.0 2345570.0 2074770.0 2222250.0 2849760.0 2354240.0 True False 2374278.940623414 2196882.2259966317 2372472.0142060886 2431568.5035733115 2804454.19082011 2330930.427584985 2284507.9994038823 2214541.5334270485 2332315.4206035123 2333383.2651710045 1.0175263429985268 0.9415008064847978 1.0167519625337758 1.042078487434044 1.201883219392414 0.9989488063865753 0.9790539057613665 0.9490689191450739 0.9995423621213749 1.0 21.15399186307941 -9.381732928567985 7.8750775222006135 1.0000014051874548 1.01671619246801 0.004978710896308303 0.06869738544141298 0.0 0.0 0.07249492751907971 0.01758260255780366 4.152092990499079e-10 9.381732928567985 0.016714787280555088 HQEGEIFDTEKEK ddPTM_KYSE-520_SHP099_60min_R1 4 HQEGEIFDTEKEK 13 1 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 ;;; 256.77 2.6882e-18 3466800000.0 8851000.0 9879100.0 6325410.0 4922160.0 8737860.0 7801310.0 5370500.0 6488940.0 8609510.0 6206010.0 False True 8360017.385968941 9404493.207168587 6733156.049613833 5389960.606498637 9425479.87037739 7752619.130540979 5913402.551029053 6466431.3816699805 7046240.012085294 6151029.579602717 1.3591248875946549 1.5289299271709897 1.0946388669535083 0.8762696613217659 1.5323418215436646 1.2603774750570627 0.9613679262148805 1.0512762616380775 1.1455383071886311 1.0 22.552396483038994 -1.0000000000000002 0.25602891715199705 1.0376918490729572 3.6257114242394684 0.2510499927504958 0.18998448415556077 76.710063677036 1.0525407843330368 0.25278922473644616 86.19696381293157 0.09999999999999995 1.0000000000000002 2.588019575166511 HQEGEIFDTEKEKYEITEQR ddPTM_KYSE-520_SHP099_60min_R1 3 HQEGEIFDTEKEKYEITEQR 20 2 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 ;; 154.84 6.9449e-07 2139360000.0 2632340.0 2504390.0 2423410.0 1524250.0 2017910.0 1652500.0 1332420.0 1395730.0 2753110.0 1221730.0 False True 2486318.852760305 2384075.3452339736 2579626.886193094 1669114.2617175265 2176708.0366626694 1642186.134536247 1467114.0167660615 1390888.5383958304 2253214.624255284 1210906.4226915583 2.0532708441943903 1.968835329103911 2.130327197752568 1.3784007008629788 1.7975856729080377 1.35616270899452 1.2115833141796495 1.1486342068483002 1.8607669280066428 1.0 20.20765594902599 -5.51073362892496 0.9128140874693904 1.3149085756709118 2.1065274433911196 0.5614816559554792 0.2608835829737308 0.4833880182711323 0.8162621818635841 0.11510564605016305 0.25682155710419946 3.085079579166944e-06 5.51073362892496 0.7916188677202078 HQEHILR ddPTM_KYSE-520_SHP099_60min_R1 1 HQEHILR 7 0 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 0 93.374 0.011395 416520000.0 232090.0 142570.0 163190.0 109380.0 172630.0 171980.0 124610.0 117630.0 125250.0 140680.0 False True 219215.50504005546 135720.72319806713 173709.48851323198 119775.44231370393 186214.9988696603 170906.60902725832 137206.79487640428 117221.9689850483 102507.75729555839 139433.6846473837 1.572184695501904 0.9733711300916538 1.245821545579384 0.8590136781983935 1.3355094168283848 1.2257196635050351 0.9840290402092505 0.8407005041966222 0.7351721182352174 1.0 17.08921960668493 -6.965081612023089 3.3133875511332826 0.8459803707942148 1.183459992420431 0.39715033526321686 0.19147659964352784 0.2527843455238851 5.742084968799817 0.08887349416925391 0.05393027184774119 1.0837232431002935e-07 6.965081612023089 0.33747962162621614 HQEHKGEIDAHEDSFK ddPTM_KYSE-520_SHP099_60min_R1 1 HQEHKGEIDAHEDSFK 16 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 127.32 0.00030145 2808800000.0 166220.0 188460.0 190550.0 170570.0 149870.0 168880.0 189000.0 166140.0 197250.0 154630.0 False True 156999.44524864492 179406.09871577303 202833.15789077975 186780.92151625967 161663.91635634584 167825.95727714495 208105.96446224587 165563.6991173676 161434.37226785524 153260.09850031973 1.0243986972794317 1.1705988738836597 1.3234570503056058 1.2187185271570866 1.0548336973436605 1.095040124072443 1.357861351379803 1.0802792164264607 1.0533359553303332 1.0 17.225622612472506 -7.506896091962785 24.62064665863626 1.0400477664551202 1.1798397806403318 0.2745008850574895 0.10132836900778971 797.7117108789421 1228854.5493153718 0.060091243806440174 0.027521840975264947 3.112460926395764e-08 7.506896091962785 0.1397920141852116 HQEVQDQDPVFQGSDSSGYQS(ph)DHKKK ddPTM_KYSE-520_SHP099_60min_R1 1 HQEVQDQDPVFQGSDSSGYQSDHKKK 26 2 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 HQEVQDQDPVFQGS(0.001)DS(0.131)S(0.101)GY(0.123)QS(0.645)DHKKK 138.1 1.3141999999999998e-06 1162000000.0 585500.0 657350.0 702400.0 985070.0 542810.0 532540.0 586780.0 583160.0 833130.0 373430.0 True False 553021.1478346862 625769.9192975344 747677.8278797353 1078690.7566279059 585526.0588335762 529216.2203243168 646097.4488209337 581137.1540705676 681854.5934981914 370121.70072414365 1.4941602903928615 1.6907139410448364 2.0200864375606793 2.914421809143981 1.5819825146377355 1.4298438035081553 1.7456351452963799 1.5701245102180497 1.8422443000887059 1.0 18.497640199670425 -5.947035170088908 24.999997339374328 1.5606068585273116 2.03533461964347 0.2683675793991738 0.40369352246413814 147.6739278066412 69702.88688716908 0.12984953854393236 0.14723551841233531 1.1297044251062648e-06 5.947035170088908 0.47472776111615844 HQEYLK ddPTM_KYSE-520_SHP099_60min_R1 2 HQEYLK 6 0 V9GYY5;Q9UGY1;H7BZQ7;H7BZK7;A0A2U3TZH2;Q9NR28-2;Q9NR28-3;Q9NR28 V9GYY5 NOL12;DIABLO Nucleolar protein 12;Diablo homolog, mitochondrial 0 ; 105.39 0.01766 317570000.0 1138410.0 1011620.0 630100.0 609750.0 925560.0 928980.0 663280.0 754580.0 831520.0 756790.0 False True 1075260.127935928 963020.2567274221 670717.2541956459 667700.4566719773 998396.3062839758 923181.8912323663 730330.8153889854 751962.5381002963 680536.9289133942 750085.4293737103 1.4335168846483592 1.2838807674633854 0.894187819053713 0.8901658804777464 1.3310434614329125 1.230768996543746 0.9736635145663086 1.0025025265830765 0.9072792274896125 1.0 19.516695392065287 -4.580744586903898 5.326780805087319 1.0406315583658508 1.400878079713788 0.4878862947851874 0.13843958580832735 0.159711654233447 9.115461431053193 0.0388952089677837 0.1110675814721554 2.625762327482479e-05 4.580744586903898 0.36024652134793733 HQGVMVGMGQK ddPTM_KYSE-520_SHP099_60min_R1 9 HQGVMVGMGQK 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;C9JUM1;C9JZR7;C9JTX5;P63261;I3L3I0;I3L1U9;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle;Beta-actin-like protein 2 0 ;;;;;;;; 157.38 4.7252e-05 28293852000.0 36150530.0 34453267.0 23592350.0 24407459.0 34282530.0 35256185.0 25701535.0 31489070.0 29125490.0 29238097.0 False True 34145188.03660505 32798080.337911915 25113150.630094685 26727136.564989872 36980370.07008686 35036138.07179723 28299696.980609305 31379841.765774213 23837035.209853955 28979070.20747525 1.178270655067366 1.1317851160542598 0.8665961485409102 0.9222910318943055 1.2761061623208203 1.2090152589767886 0.9765564173728839 1.0828450168038752 0.8225603871757455 1.0 24.788507971025503 -7.742245403147509 24.87976477917555 0.9112802198028336 1.0770916212411152 0.2174887236186933 0.12821607949171518 328.07608990513364 425264.65650520934 0.092933688017331 0.03500385813391603 1.810316862956918e-08 7.742245403147509 0.16581140143828166 HQHMHDRDDLYAEQMER ddPTM_KYSE-520_SHP099_60min_R1 22 HQHMHDRDDLYAEQMER 17 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 0 ;;;;;;;;;;;;;;;;;;;;; 184.8 3.5042e-12 14604818000.0 4128192.8 10227980.6 4316292.8 4923044.0 1662665.6 7233320.0 3377622.8 7492909.0 2956407.2 3035050.7 False True 3899193.7160356757 9736613.059464125 4594527.940200664 5390928.621592854 1793507.9234468099 7188174.166816175 3719065.875045873 7466917.847537105 2419598.1774406475 3008162.512031717 1.2962044771318404 3.2367310677267906 1.5273536325992951 1.7921001940655836 0.596213773781614 2.389556461150522 1.2363247863673466 2.482218901961496 0.8043442359789423 1.0 21.520451078151247 -1.0000035062843815 0.05799407730702268 9.657260466661192e-07 5.1272347728266405 0.11088151576353733 0.750501176507516 814.3991857474209 3.5442910286253855 65.47424738526949 356.29822448781914 0.0999991926514442 1.0000035062843815 5.127233807100594 HQILEQAVEDYAETVHQLSK ddPTM_KYSE-520_SHP099_60min_R1 2 HQILEQAVEDYAETVHQLSK 20 0 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ; 261.46 3.4149000000000003e-35 441210000.0 584230.0 599660.0 415050.0 655280.0 638580.0 516080.0 472720.0 523920.0 507290.0 349830.0 False True 551821.5972663686 570851.43349199 441804.7871034798 717557.6141828834 688832.6129768151 512858.9532898446 520507.150902608 522102.6438038479 415178.9237402298 346730.77836362144 1.591498741100121 1.6463823494011542 1.2742012381726115 2.069495005806409 1.9866497466066502 1.4791272805669482 1.5011853097066128 1.5057868420792788 1.197410064660674 1.0 18.403456380841135 -7.724236310310598 0.9989167986547635 0.9989808965632475 1.683749623551995 0.5196527820458858 0.21670315787677547 0.43900475242048154 0.9054931294960346 0.21820730425155155 0.07635084269824448 1.886964326001092e-08 7.724236310310598 0.6847687269887476 HQIVEVAGDDKYGR ddPTM_KYSE-520_SHP099_60min_R1 2 HQIVEVAGDDKYGR 14 1 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 0 ; 121.79 9.190299999999999e-05 2033160000.0 3158100.0 2632800.0 1816520.0 1790990.0 2703800.0 2561100.0 2064220.0 2457480.0 2327100.0 2313700.0 False True 2982913.8974837326 2506316.336086631 1933615.7857347638 1961205.1511192203 2916573.6774824085 2545115.2249081945 2272891.5024458063 2448955.5754601434 1904557.3014171154 2293202.4180313637 1.3007634537750326 1.0929328856360696 0.8431945520948417 0.8552254854165243 1.2718343808420487 1.1098519715904929 0.9911429905071382 1.0679194981673221 0.8305229780160938 1.0 21.128932274701324 -4.346630057157992 3.6991604213045046 1.0056296361208052 1.3100128254653038 0.3343737410447174 0.129208260092417 0.29118856575791185 6.60733148783296 0.03447813074137573 0.20194073410283125 4.5016315178891826e-05 4.346630057157992 0.3043831893444986 HQLEETKK ddPTM_KYSE-520_SHP099_60min_R1 1 HQLEETKK 8 1 P22059;H0YCV6 P22059 OSBP Oxysterol-binding protein 1 0 145.72 0.0010248 505770000.0 942760.0 869930.0 233200.0 262030.0 1316800.0 1415200.0 488070.0 706910.0 595910.0 1306200.0 False True 890463.2234545335 828137.2570084484 248232.4451331924 286933.25241780764 1420424.668432883 1406367.211858216 537408.8787041702 704457.894204035 487707.7656686319 1294628.0842082233 0.687813924567478 0.6396719390765617 0.19174035243102883 0.22163373088981927 1.097168125548269 1.0863098282919845 0.4151067671553272 0.5441392032174799 0.3767165038497579 1.0 20.304106274856352 -5.741200461468026 24.99913473202373 0.7301940366250724 0.4324281007126357 0.22960302681713418 0.28348963809861943 442.2218534995541 546230.4988903694 0.0916667669053806 0.11819324176154951 1.8146778511747545e-06 5.741200461468026 -0.2977659359124367 HQNS(ph)LPELEAAEAGAPGSGPVDLFR ddPTM_KYSE-520_SHP099_60min_R1 4 HQNSLPELEAAEAGAPGSGPVDLFR 25 0 Q96BZ8 Q96BZ8 LENG1 Leukocyte receptor cluster member 1 1 HQNS(1)LPELEAAEAGAPGSGPVDLFR;HQNS(1)LPELEAAEAGAPGSGPVDLFR;HQNS(1)LPELEAAEAGAPGSGPVDLFR;HQNS(1)LPELEAAEAGAPGSGPVDLFR 192.89 1.9753e-15 769760000.0 408618.0 376241.0 361468.0 311196.0 306927.0 430824.0 335275.0 416888.0 543260.0 464860.0 True False 385951.144980212 358165.817610745 384768.8056492491 340771.9742755112 331080.40872425586 428135.06760995195 369167.8689686745 415441.91283039114 444617.6784701393 460741.7020556076 0.8376735668993796 0.7773679178871408 0.8351074016799348 0.7396160858788141 0.7185813813838308 0.9292301211282146 0.8012469184396057 0.9016807269168157 0.9650042018911449 1.0 18.813598657631864 -7.463758426675437 0.9055242281568257 1.0041212778373994 0.7907553213262141 0.6464087143573669 0.05389664607104017 0.3524412000525993 0.5420014115185322 0.050205770000716125 0.019594686905123705 3.437491028095882e-08 7.463758426675437 -0.21336595651118528 HQNVQLPR ddPTM_KYSE-520_SHP099_60min_R1 2 HQNVQLPR 8 0 P26599;P26599-2;P26599-3;A6NLN1;A0A0U1RRM4;A0A087WUW5;A0A0D9SF20;K7EK45 P26599 PTBP1 Polypyrimidine tract-binding protein 1 0 ; 116.73 0.0016908000000000001 2160900000.0 426620.0 391230.0 313080.0 312150.0 473000.0 421590.0 308730.0 403740.0 420270.0 353770.0 False True 402954.5381541142 372434.7235517981 333261.6377457112 341816.6421486805 510222.4089981422 418958.70042913023 339939.44131444005 402339.52017362445 343959.5621445455 350635.873028895 1.1492108171171287 1.0621694817891798 0.950449350395611 0.9748478933315311 1.455134651770488 1.1948540712906603 0.9694941888801735 1.1474568095332012 0.9809594185937748 1.0 18.4196140780453 -7.742843932064977 1.621952837405806 0.9877201380451222 1.1142771571427252 0.0911590359909552 0.14111932123184304 1.0573973000321777 5.4376476071248065 0.14257057477030585 0.04312251475803569 1.8078236682665897e-08 7.742843932064977 0.12655701909760309 HQPST(ph)PDPFLKPR ddPTM_KYSE-520_SHP099_60min_R1 3 HQPSTPDPFLKPR 13 1 O14686-3;O14686 O14686-3 KMT2D Histone-lysine N-methyltransferase 2D 1 HQPS(0.16)T(0.84)PDPFLKPR;HQPS(0.059)T(0.941)PDPFLKPR;HQPS(0.001)T(0.999)PDPFLKPR 123.42 0.0001488 2268340000.0 977878.0 841724.0 828602.0 960631.0 932515.0 1034450.0 1069210.0 1475910.0 1584770.0 1281790.0 True False 923633.1579885349 801286.3155865185 882015.0107300758 1051929.0814157594 1005898.6252154394 1027993.6138402552 1177296.1812840083 1470790.412689983 1297015.7168006531 1270434.337817529 0.7270215630154002 0.6307184021513801 0.6942625718423856 0.8280074381670616 0.7917753757690982 0.8091670566825506 0.9266879414692757 1.1577067534372885 1.0209230640198124 1.0 20.276890381194743 -6.683051269927268 1.102803207960039 1.0753678982545405 0.7114036968209527 0.822181086418011 0.06594204589050996 0.20362574249630125 0.498887188088174 0.04634108318293178 0.028248492317653223 2.0746685813792542e-07 6.683051269927268 -0.36396420143358776 HQPWQS(ph)PERPLSR ddPTM_KYSE-520_SHP099_60min_R1 14 HQPWQSPERPLSR 13 1 J3QRS2;V9GYU5;J3QL08;V9GYS7;E7ES68;G5E9D5;Q9BQ52-2;Q9BQ52 J3QRS2 ELAC2 Zinc phosphodiesterase ELAC protein 2 1 HQPWQS(1)PERPLSR;HQPWQS(0.964)PERPLS(0.036)R;HQPWQS(1)PERPLSR;HQPWQS(1)PERPLSR;HQPWQS(1)PERPLSR;HQPWQS(0.966)PERPLS(0.034)R;HQPWQS(1)PERPLSR;HQPWQS(1)PERPLSR;HQPWQS(1)PERPLSR;HQPWQS(1)PERPLSR;HQPWQS(1)PERPLSR;HQPWQS(1)PERPLSR;HQPWQS(1)PERPLSR;HQPWQS(1)PERPLSR 186.94 1.9007e-08 118627200000.0 14419830.0 13351630.0 12461830.0 12762160.0 14020820.0 13076710.0 12658400.0 14064970.0 15305190.0 12951520.0 True False 13619933.28468155 12710197.653594788 13265139.50143298 13975071.84931669 15124178.766446816 12995093.402330728 13938034.606078792 14016181.901858686 12526153.308442358 12836779.608930096 1.0610085784449117 0.9901391190632229 1.0333697317826418 1.0886742839765453 1.1781910437977339 1.0123328278761208 1.0857890398291634 1.0918768046861318 0.9758018514026956 1.0 23.613779979992707 -5.108244594207874 5.8423214155266505 1.0692400597444236 1.0224009915993784 0.05816567907516024 0.05686963593390653 0.5107307887259966 23.286516233926942 0.015388356554602063 0.027216955778986203 7.793910346580141e-06 5.108244594207874 -0.04683906814504524 HQQIPLHS(ph)PPSK ddPTM_KYSE-520_SHP099_60min_R1 3 HQQIPLHSPPSK 12 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;C9JAU4 E7EX82 PHC3 Polyhomeotic-like protein 3 1 HQQIPLHS(1)PPSK;HQQIPLHS(1)PPSK;HQQIPLHS(1)PPSK 159.18 6.511e-06 3307060000.0 2498210.0 2354850.0 2168310.0 2298310.0 2289760.0 2244800.0 2109150.0 2073920.0 2602860.0 2194170.0 True False 2359629.311241831 2241719.471298087 2308082.732018666 2516740.6913879015 2469951.0850477507 2230789.37053372 2322363.4653203455 2066726.0555765666 2130246.2367610144 2174731.3608384305 1.0850210530518658 1.030802935785977 1.061318548847718 1.1572650933849664 1.135749973318775 1.0257769813342268 1.067885214302974 0.9503362543039687 0.9795445428899937 1.0 21.052405768757893 -7.015503754174671 1.8440192245897613 0.9736178309442697 1.0879013004867875 0.5653925692442513 0.041107390770515354 0.2807799878825308 1.8700953338338406 0.027576802340803428 0.013806362378306814 9.649309706103398e-08 7.015503754174671 0.11428346954251778 HQQQLLAS(ph)PGSSTVDNK ddPTM_KYSE-520_SHP099_60min_R1 8 HQQQLLASPGSSTVDNK 17 0 F2Z2X4;Q9C0E2 F2Z2X4 XPO4 Exportin-4 1 HQQQLLAS(0.963)PGS(0.031)S(0.003)T(0.003)VDNK;HQQQLLAS(1)PGSSTVDNK;HQQQLLAS(0.988)PGS(0.012)STVDNK;HQQQLLAS(1)PGSSTVDNK;HQQQLLAS(1)PGSSTVDNK;HQQQLLAS(1)PGSSTVDNK;HQQQLLAS(0.993)PGS(0.007)STVDNK;HQQQLLAS(1)PGSSTVDNK 297.56 7.5068e-38 10623980000.0 6112760.0 5967400.0 5340560.0 5227280.0 5535660.0 5907130.0 5303410.0 5551390.0 6740990.0 5445410.0 True False 5773673.017315048 5680717.146749984 5684821.042798129 5724079.119560964 5971284.94840308 5870261.410531385 5839530.439093751 5532133.523794163 5516996.142529228 5397167.903864878 1.0697597555155838 1.0525366725541478 1.0532970520941667 1.0605708811582435 1.1063737602321173 1.0876558808421963 1.081961973966402 1.0250067484157084 1.022202058709076 1.0 22.36377113903333 -7.355938428934815 4.2422915277661275 1.0148435079812286 1.072937246440387 0.7222336624336443 0.016399188761442484 0.1462326061761916 4.606608639789427 0.01110944879551486 0.0050149922494761795 4.406173265500908e-08 7.355938428934815 0.05809373845915844 HQRPQPEK ddPTM_KYSE-520_SHP099_60min_R1 1 HQRPQPEK 8 1 O95391;A0A0C4DGD2;E5RGM7;E5RK41 O95391 SLU7 Pre-mRNA-splicing factor SLU7 0 54.722 0.054612 204700000.0 150350.0 203440.0 86961.0 74074.0 123090.0 191660.0 80575.0 95860.0 123150.0 123520.0 False True 142009.78578470557 193666.43703033443 92566.64520251944 81113.97068883975 132776.48271370263 190463.77884733275 88720.30733621922 95527.48403389209 100789.06435886637 122425.70889710574 1.159967028690514 1.5819098682377561 0.7561046289739541 0.662556675550991 1.0845473872264553 1.5557498548561437 0.7246868989812045 0.7802894089359891 0.8232671492519258 1.0 16.901547024327705 -4.764549886061985 24.999849134502462 0.9274798586318403 1.3709384660956971 0.3180393754166396 0.2620829790439095 92.96317253992638 747193.0250224222 0.07281714828218791 0.16262418678727025 1.7196897944524132e-05 4.764549886061985 0.4434586074638568 HQRPS(ph)SACEEGEGNGGGIGVR ddPTM_KYSE-520_SHP099_60min_R1 1 HQRPSSACEEGEGNGGGIGVR 21 1 H7C3H7;H7C0J3 H7C3H7 CHD3 1 HQRPS(0.5)S(0.5)ACEEGEGNGGGIGVR 62.605 0.0145 30087000.0 2525.8 2922.0 2906.2 2637.0 2572.3 3649.6 2669.7 2397.5 3816.5 2552.8 True False 2385.6888389425308 2781.622733988581 3093.53830208441 2887.619687157041 2774.725375615059 3626.8214926496166 2939.579329761149 2389.183632080706 3123.5198061357164 2530.1841780483473 0.9428913751182838 1.0993755941253969 1.2226534055993523 1.1412685733354007 1.0966495639678444 1.433421931935073 1.161804486513147 0.9442726157285507 1.2345029398393588 1.0 11.305026690564214 -4.331530134778468 3.192953976179652 1.1601767768903242 0.9267609651631764 0.19844796534902198 0.12696450609631957 0.46352512529173595 7.623646059608441 0.03278651208679567 0.24200121546655498 4.660900858714316e-05 4.331530134778468 -0.23341581172714776 HQRTHTGERPNACADCGK ddPTM_KYSE-520_SHP099_60min_R1 1 HQRTHTGERPNACADCGK 18 2 Q6DD87 Q6DD87 ZNF787 Zinc finger protein 787 0 63.918 0.030907 86275000.0 35671.0 44330.0 37001.0 65576.0 44192.0 43351.0 46394.0 50489.0 73188.0 23324.0 False True 33692.25852162444 42200.32025931345 39386.14366369323 71808.3233238566 47669.65898191522 43080.43032876306 51083.95828180652 50313.86544322119 59898.904119339844 23117.36750579742 1.4574435654567945 1.82548122093618 1.703746919012984 3.106250022016926 2.0620712531373013 1.863552600353793 2.2097653752744804 2.1764530684821 2.5910780760100938 1.0 14.496689499595416 -5.0478174244551655 24.999907578097723 2.198051973481169 1.6722465588391422 0.15182519469364275 0.5113929247774248 630.208200302768 329484.6293299694 0.13211821407197333 0.22884319787468163 8.957412522030718e-06 5.0478174244551655 -0.5258054146420268 HQS(ph)DPS(ph)EDEDER ddPTM_KYSE-520_SHP099_60min_R1 3 HQSDPSEDEDER 12 0 E5RJV7;E5RHR8;E5RHX2;E5RHY6;Q96BR1-2;Q96BR1 E5RJV7 SGK3 Serine/threonine-protein kinase Sgk3 2 HQS(1)DPS(1)EDEDER;HQS(1)DPS(1)EDEDER;HQS(1)DPS(1)EDEDER 154.51 3.4197e-05 165056000.0 422525.0 415993.0 361677.0 428353.0 428268.0 413790.0 372639.0 417271.0 463318.0 383723.0 True False 399086.6959672951 396008.0718617767 384991.278123661 469063.54033097415 461970.2550884064 411207.38312239316 410308.98672617326 415823.5842927831 379191.13049631525 380323.51275197667 1.0493347967880036 1.0412400458659745 1.0122731443499482 1.2333277449424176 1.2146770830592182 1.0812042099289219 1.0788420199351474 1.0933417744381146 0.9970225815189084 1.0 18.53686760794142 -10.180461760173436 6.1409094151412695 0.9999991390638202 1.09290283014705 0.11262040073179802 0.07425918613727028 9.51417517287489e-07 1.2715942445163732e-07 0.0780970413569654 0.018941138901568462 6.599913442431171e-11 10.180461760173436 0.09290369108322982 HQS(ph)FGAAVLSR ddPTM_KYSE-520_SHP099_60min_R1 10 HQSFGAAVLSR 11 0 Q5VV41 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 HQS(1)FGAAVLSR;HQS(1)FGAAVLSR;HQS(1)FGAAVLSR;HQS(1)FGAAVLSR;HQS(1)FGAAVLSR;HQS(1)FGAAVLSR;HQS(1)FGAAVLSR;HQS(1)FGAAVLSR;HQS(1)FGAAVLSR;HQS(1)FGAAVLSR 194.05 4.2293999999999995e-07 23270890000.0 4760163.0 5985410.0 6496710.0 7693640.0 6424380.0 5077207.0 5694920.0 5996900.0 7273860.0 6427200.0 True False 4496107.269240317 5697861.919316428 6915498.321703537 8424841.23242279 6929942.1562779825 5045518.267818684 6270618.090663134 5976098.153586975 5953110.383088787 6370260.00828594 0.7057965080533808 0.8944473085721919 1.0855912180520724 1.3225270587800828 1.0878586034579518 0.7920427519843563 0.9843582652053136 0.9381246834216705 0.934516075536233 1.0 22.602920827992456 -6.2235743661316985 24.893632041600515 0.9293503551740498 1.0328459771355833 0.07282137135999511 0.1558247256021884 1528.3827603069028 1004806.7361238473 0.05674127136732523 0.05674020370109438 5.976207027363688e-07 6.2235743661316985 0.1034956219615335 HQSIFKS(ph)NGFFHGIS(ph)IPEPEDMET(ph)LEEK ddPTM_KYSE-520_SHP099_60min_R1 1 HQSIFKSNGFFHGISIPEPEDMETLEEK 28 1 H7BZI6;Q5MAI5-2;Q5MAI5 H7BZI6 CDKL4 Cyclin-dependent kinase-like 4 3 HQS(0.566)IFKS(0.717)NGFFHGIS(0.717)IPEPEDMET(1)LEEK 53.408 0.033371 283190000.0 72266.0 59711.0 58543.0 32763.0 60102.0 53692.0 55719.0 74448.0 75149.0 65572.0 True False 68257.26092130056 56842.39393196177 62316.77545211188 35876.78566944484 64831.68546639825 53356.888311963834 61351.620285036326 74189.75726429388 61503.835952127105 64991.08309424405 1.0502557838945414 0.8746183510980143 0.9588511605776112 0.5520262774728596 0.9975473923458906 0.8209878305088502 0.9440005822963419 1.1415374807142507 0.9463426830868464 1.0 15.987954170641576 -7.010145254376297 9.160224055648811 1.0350481185683806 0.8711964509128589 0.20728820877735143 0.1343691914621371 0.2704167414056643 198.14811700396353 0.0588995989681574 0.03668784677614293 9.769104282987918e-08 7.010145254376297 -0.16385166765552173 HQWAHAEEKPHR ddPTM_KYSE-520_SHP099_60min_R1 2 HQWAHAEEKPHR 12 1 A6NFI3 A6NFI3 ZNF316 Zinc finger protein 316 0 ; 187.11 3.6644e-07 316620000.0 242650.0 229600.0 193168.0 255000.0 156138.0 174868.0 196827.0 216150.0 241844.0 94024.0 False True 229189.72078921707 218569.67136337367 205619.91835972786 279235.1233314542 168425.17229630446 173776.5839480089 216724.19400640443 215400.22609978917 197931.22599111378 93191.02050956505 2.4593541259234653 2.345394118105401 2.2064348821957926 2.996373704296904 1.8073111698462132 1.8647352824103114 2.3255909509453225 2.3113839179138584 2.1239302339306207 1.0 16.507903329166897 -5.792784354473564 24.999960936795777 1.9900281845367935 2.469608059722756 0.3316743058104641 0.4031524427193638 278.36260827336827 222013.5190749393 0.12211966741251937 0.13848382249784388 1.6114455872529128e-06 5.792784354473564 0.47957987518596257 HQYYNQEWTLWDR ddPTM_KYSE-520_SHP099_60min_R1 2 HQYYNQEWTLWDR 13 0 P22314;P22314-2;Q5JRR6 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 0 ; 199.31 1.9944e-08 947750000.0 565960.0 527680.0 368660.0 382260.0 606770.0 640960.0 621450.0 555320.0 486910.0 471160.0 False True 534565.070586711 502329.4607361716 392424.41347685555 418589.8754693405 654519.3469509583 636959.5308879596 684272.2307675268 553393.7245326628 398499.41800223826 466985.88895693346 1.1447135410894822 1.0756844534600007 0.8403346284260976 0.8963651480011718 1.4015827082332237 1.3639802528309406 1.4652953053804845 1.1850330762000778 0.853343596510662 1.0 18.833019430711296 -5.751401911841648 24.995682597421286 1.241100681322457 0.9848080139529585 0.2366527826248519 0.19112009679327704 286.11391947586725 712488.0867456727 0.060178615614715374 0.07676850540479799 1.7725483411939694e-06 5.751401911841648 -0.2562926673694985 HRDLLHNEDR ddPTM_KYSE-520_SHP099_60min_R1 5 HRDLLHNEDR 10 1 Q8N684-2;Q8N684;Q8N684-3;F5H669 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 0 ;;;; 169.89 4.6126000000000005e-05 2669960000.0 1031630.0 1467560.0 1578140.0 965677.0 893889.0 1062250.0 815768.0 872264.0 1227850.0 770194.0 False True 974403.4273965796 1397056.21474753 1679869.4295132787 1057454.6517386243 964232.978767315 1055620.1037283698 898233.7905684505 869238.3197719479 1004903.391579651 763370.680361864 1.2764485884297767 1.830115107493095 2.200594642588267 1.3852439960588405 1.2631255084492312 1.3828407756346752 1.1766679198926748 1.138684445360017 1.3164029185706898 1.0 19.54202425083984 -5.48080728716235 9.821046041707095 1.2352604106376535 1.7786887042986606 0.5371964968353697 0.23025049141030898 0.44765781498153345 102.2650944731324 0.06575597968695619 0.09683091880291769 3.30516170989697e-06 5.48080728716235 0.5434282936610071 HRDYETATLSDIK ddPTM_KYSE-520_SHP099_60min_R1 4 HRDYETATLSDIK 13 1 O43707;O43707-2 O43707 ACTN4 Alpha-actinin-4 0 ;;; 232.22 1.1446e-13 11039800000.0 15319500.0 14499700.0 9941890.0 12169600.0 14062700.0 13120400.0 9948140.0 11577680.0 12587200.0 10368310.0 False True 14469696.796333889 13803112.6475066 10582760.136986425 13326195.125076337 15169354.48418219 13038510.71683473 10953795.07569018 11537519.73033084 10301681.777490234 10276454.839823125 1.4080436319596512 1.34317844652195 1.0298065142052988 1.2967696868996996 1.4761271976205443 1.2687751680966999 1.0659118583621112 1.122714001098984 1.0024548288354609 1.0 23.292839315210557 -6.739936015817265 4.640159088599115 1.0555436458199006 1.302929631314327 0.5528678664406972 0.11309314448908594 0.17377106296560366 9.052193676508644 0.04969397537240975 0.036026056018912914 1.8199689731139558e-07 6.739936015817265 0.24738598549442647 HREDS(ph)DVEMVEDDSRK ddPTM_KYSE-520_SHP099_60min_R1 6 HREDSDVEMVEDDSRK 16 2 H0Y4N0;H0Y806;E7EUC9;A0A087WX20;A0A669KB03;A0A669KBB4;A0A669KBK2;H0Y818;A0A669KAW3;P40692-2;P40692-3;P40692 H0Y4N0 MLH1 DNA mismatch repair protein Mlh1 1 HREDS(1)DVEMVEDDSRK;HREDS(1)DVEMVEDDSRK;HREDS(1)DVEMVEDDSRK;HREDS(1)DVEMVEDDSRK;HREDS(1)DVEMVEDDSRK;HREDS(1)DVEMVEDDSRK 225.84 1.6937999999999998e-18 12838020000.0 6493930.0 5897947.0 6653240.0 7026974.0 6250139.0 6350913.0 6429295.0 6879269.0 8542900.0 5614236.0 True False 6133698.75757149 5614600.773121072 7082118.495960386 7694815.496223232 6741989.380873667 6311274.596215445 7079230.882472454 6855406.421472452 6991724.70898383 5564498.236849508 1.1022914369803538 1.0090039630060033 1.2727326336561333 1.382840854412753 1.211607784548572 1.134203719289656 1.272213698549135 1.2319900428890829 1.2564879008646044 1.0 22.407820171743992 -4.762760827876065 24.999969343726757 1.2328245082179565 1.055647672234953 0.3071603720512731 0.09743946532018818 34.92521291864718 660796.6560419016 0.0246135264658867 0.05623288593832216 1.7267885971270363e-05 4.762760827876065 -0.1771768359830035 HREDSDVEMVEDDSRK ddPTM_KYSE-520_SHP099_60min_R1 2 HREDSDVEMVEDDSRK 16 2 H0Y4N0;H0Y806;E7EUC9;A0A087WX20;A0A669KB03;A0A669KBB4;A0A669KBK2;H0Y818;A0A669KAW3;P40692-2;P40692-3;P40692 H0Y4N0 MLH1 DNA mismatch repair protein Mlh1 0 ; 123.03 0.00016836 844990000.0 810520.0 1032980.0 625650.0 760660.0 751700.0 920090.0 691910.0 833340.0 836890.0 657800.0 False True 765558.8398684374 983354.0902654099 665980.4000753948 832952.8976992322 810854.5134120579 914347.3770199443 761855.015190859 830449.3380430174 684931.8722800786 651972.4037606558 1.17421969925813 1.5082756334367904 1.021485566312223 1.2775891937981716 1.243694531754643 1.4024326363292032 1.168538746113159 1.2737492158454637 1.050553471787009 1.0 19.31445137478239 -7.825099366960664 4.131802052160897 1.0033325304778373 1.2617009793081544 0.36044173066267204 0.12486561453559301 0.21952210696110866 6.92586255883549 0.11175364975619083 0.03013696356693973 1.4958933552169625e-08 7.825099366960664 0.25836844883031707 HREEIGNR ddPTM_KYSE-520_SHP099_60min_R1 4 HREEIGNR 8 1 H0Y8R1;F5H5I6;H0YAK1;Q12849-5;Q12849 H0Y8R1 GRSF1 G-rich sequence factor 1 0 ;;; 171.36 0.00013151 808073000.0 266339.0 289336.0 179965.0 190614.0 294831.0 308415.0 193889.0 249360.0 225285.0 160018.0 False True 251564.6447363664 275435.86425780976 191565.83185418087 208729.89724981104 318032.52234108106 306490.0675842642 213489.19229428787 248495.0283610617 184378.92297269334 158600.3650121203 1.586154260850167 1.7366660173623234 1.2078524021022354 1.3160745073560192 2.0052445800914573 1.9324676053604424 1.346082603769373 1.5667998515770856 1.1625378223978426 1.0 17.275036565784944 -7.843171528930281 1.8487007015123813 0.9906355560284851 1.600437724042942 0.41316033038653355 0.2440557443372504 0.3491863226004425 2.477424485136133 0.24968955536476165 0.07227084804356872 1.4349225844561959e-08 7.843171528930281 0.6098021680144569 HREELEQLK ddPTM_KYSE-520_SHP099_60min_R1 3 HREELEQLK 9 1 A0A0C4DH76;A0A087X0W9;Q8N6M0 A0A0C4DH76 OTUD6B OTU domain-containing protein 6B 0 ;; 102.53 0.0023049 953280000.0 755060.0 699080.0 562150.0 555130.0 735620.0 703940.0 588020.0 705200.0 669510.0 534900.0 False True 713175.316625207 665495.1474595277 598387.0884718024 607889.38829408 793509.1088947436 699546.449346715 647462.8001221681 702753.8257949167 547943.8609736473 530161.2021459027 1.3452046542420093 1.2552694251594452 1.1286889460219756 1.1466123621146955 1.4967317594778775 1.3194976292403169 1.22125647350555 1.3255474428351621 1.0335419845054048 1.0 19.01607157029314 -7.772537786610919 20.417655197181208 1.0167673908885901 1.2761494054216693 0.5245309188197267 0.10014021016177212 21.939407110826593 40347.20189589784 0.09741766700508123 0.026603487403772004 1.6883489551092162e-08 7.772537786610919 0.2593820145330792 HREELEQSK ddPTM_KYSE-520_SHP099_60min_R1 2 HREELEQSK 9 1 A0A087WY61;Q14980-2;Q14980;Q14980-4;Q14980-3;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 0 ; 65.347 0.028875 857500000.0 955910.0 900270.0 627040.0 676100.0 963690.0 875420.0 671870.0 799540.0 814610.0 631700.0 False True 902883.7667406576 857019.6778671795 667460.0016994722 740356.3407231233 1039526.9203539544 869956.1790594397 739789.1764193075 796766.5823540383 666697.3586469836 626103.6294551629 1.4420676135136759 1.3688144223232828 1.0660535577477768 1.1824821098184393 1.6603112830675548 1.38947633927067 1.1815762465122173 1.2725794019871546 1.0648354797545982 1.0 19.256041938827394 -7.699393674384578 1.3193806126749668 0.9964703969993022 1.3353846385055048 0.37059310129271983 0.1541523154434046 0.5071024996295757 1.7214717135925488 0.15614821324160452 0.049980124488514195 1.9980498786854377e-08 7.699393674384578 0.33891424150620264 HREQEELRR ddPTM_KYSE-520_SHP099_60min_R1 4 HREQEELRR 9 2 Q8WXF1;Q8WXF1-2;A0A0U1RQF9 Q8WXF1 PSPC1 Paraspeckle component 1 0 ;;; 155.06 0.00013576 1819600000.0 1437610.0 1672290.0 1597750.0 1321730.0 1569890.0 1517490.0 1388250.0 1374190.0 1768110.0 785960.0 False True 1357862.9074955152 1591950.6782415349 1700743.5214903888 1447346.8218073854 1693431.4115477672 1508018.7820256671 1528587.858014352 1369423.2556283586 1447065.794425946 778997.0058676271 1.7430913049314765 2.0435902400786 2.1832478285281005 1.857961983044296 2.1738612585059505 1.9358466985968374 1.9622512622007444 1.7579313467362172 1.8576012276378917 1.0 19.571258257629754 -8.947714948511491 0.5839654496569915 0.9376967427735258 2.0084404733381604 0.8238169298890333 0.13378445343986348 1.4830676957378568 0.6230356518906667 0.3466003575224396 0.05583113658527586 1.1279375410619867e-09 8.947714948511491 1.0707437305646348 HRFEVNPVWK ddPTM_KYSE-520_SHP099_60min_R1 2 HRFEVNPVWK 10 1 B4E1E0;P17812-2;P17812;A0A3B3IRI2 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 0 ; 108.7 0.0008951 733130000.0 1088810.0 1054840.0 911770.0 621830.0 1085670.0 1002480.0 885340.0 932060.0 948640.0 859110.0 False True 1028411.5388110764 1004163.9030528796 970544.1530835802 680928.5362399934 1171106.0523826913 996223.1504689262 974838.807285738 928826.9014044397 776390.889268331 851498.9537774657 1.2077660627165558 1.1792896498558845 1.1398066301526264 0.7996821760252568 1.3753464372297433 1.1699640334840427 1.1448502701748549 1.090813907972438 0.9117931217931199 1.0 19.699645231726432 -7.6165515833967286 4.449310309397978 0.9581578513578082 1.1415197330831817 0.23314396815560035 0.13505910200585797 0.3308470128506039 11.422279582160156 0.10195671780454511 0.03526637953496589 2.417956127747229e-08 7.6165515833967286 0.1833618817253735 HRGS(ph)CPGPR ddPTM_KYSE-520_SHP099_60min_R1 1 HRGSCPGPR 9 1 Q92903;D6RGC8 Q92903 CDS1 Phosphatidate cytidylyltransferase 1 1 HRGS(1)CPGPR 56.93600000000001 0.032077 94392000.0 19405.0 18872.0 19493.0 17217.0 14724.0 19156.0 14564.0 16740.0 23202.0 8814.7 True False 18328.56596709154 17965.360792550488 20749.549969902753 18853.29850352019 15882.695031899897 19036.44029844258 16036.271250942584 16681.932847145377 18989.10167482271 8736.60861573283 2.097903977761528 2.0563311901369348 2.375011962025756 2.15796533102894 1.8179474130612236 2.1789279039193628 1.8355258838154391 1.9094288849227672 2.173509482916203 1.0 13.09285764645045 -10.889512810805385 0.3380023897940289 3.327630203569787e-14 2.1305413478828896 0.7923276581106956 0.1638701893328892 14.729504390662239 0.8109441123418564 12.022877827731156 0.14206677495415582 1.2896955139386966e-11 10.889512810805385 2.1305413478828563 HRGS(ph)EEDPLLS(ph)PVETWK ddPTM_KYSE-520_SHP099_60min_R1 4 HRGSEEDPLLSPVETWK 17 1 H0YK04;A0A0A0MSK6;Q13017-2;Q13017 H0YK04 ARHGAP5 Rho GTPase-activating protein 5 2 HRGS(1)EEDPLLS(1)PVETWK;HRGS(1)EEDPLLS(0.999)PVET(0.001)WK;HRGS(1)EEDPLLS(1)PVETWK;HRGS(1)EEDPLLS(1)PVETWK 157.9 3.6475e-06 1051440000.0 877570.0 959070.0 785150.0 966090.0 1040910.0 1247260.0 1287690.0 1439660.0 1790390.0 1518890.0 True False 828889.442707577 912994.8376065814 835762.0252844177 1057906.9031344494 1122823.695032255 1239475.3876923942 1417862.2718433305 1434666.1554791701 1465300.3080590402 1505433.816278538 0.5505983947913486 0.6064662741956486 0.5551635789279916 0.7027256141685565 0.7458472653470063 0.8233343600294577 0.9418296948771311 0.9529918485727211 0.9733409016155167 1.0 20.521747853258184 -6.120293180178485 0.7320548516136074 0.996930220784907 0.5478870290974867 0.9779934075134854 0.02499658836444205 0.08912177931453512 0.10603535521154282 0.01669084332262578 0.019301626461768258 7.580656531259935e-07 6.120293180178485 -0.44904319168742035 HRGS(ph)EEDPLLSPVETWK ddPTM_KYSE-520_SHP099_60min_R1 5 HRGSEEDPLLSPVETWK 17 1 H0YK04;A0A0A0MSK6;Q13017-2;Q13017 H0YK04 ARHGAP5 Rho GTPase-activating protein 5 1 HRGS(1)EEDPLLSPVETWK;HRGS(1)EEDPLLSPVETWK;HRGS(1)EEDPLLSPVETWK;HRGS(1)EEDPLLSPVETWK;HRGS(1)EEDPLLSPVETWK 176.65 8.9743e-09 4172260000.0 2989950.0 2997880.0 2519040.0 2848770.0 2801140.0 2834570.0 2810860.0 3000710.0 3726750.0 3032140.0 True False 2824091.513182445 2853857.344890379 2681421.349006505 3119516.2442860645 3021573.7816935643 2816878.3971996433 3095009.160149992 2990301.237380977 3050066.143722334 3005277.5985692255 0.939710699113772 0.9496152189897745 0.8922374925641131 1.0380126766895765 1.0054225217437807 0.9373105494616282 1.0298579943574884 0.995016646317339 1.0149032971777487 1.0 21.519066828673914 -5.261631111796932 24.99999934331561 1.001215781997421 0.9294305451606879 0.5884948050648156 0.02898214545183517 12.784702216833654 1667097.2104029185 0.008082488141076665 0.01291928030499376 5.4748079371079865e-06 5.261631111796932 -0.0717852368367331 HRGSEEDPLLS(ph)PVETWK ddPTM_KYSE-520_SHP099_60min_R1 1 HRGSEEDPLLSPVETWK 17 1 H0YK04;A0A0A0MSK6;Q13017-2;Q13017 H0YK04 ARHGAP5 Rho GTPase-activating protein 5 1 HRGSEEDPLLS(1)PVETWK 106.02 0.00014953 0.0 188950.0 317450.0 275280.0 376660.0 257970.0 257580.0 266180.0 262810.0 415750.0 312540.0 True False 178468.5668375135 302199.2254978356 293024.98926357273 412457.6531530413 278270.7713514816 255972.3476755501 293088.0720664578 261898.37345031544 340260.28020461765 309771.1387524404 0.576130389539421 0.9755564276094293 0.9459402526771524 1.3314915482899936 0.898310838356917 0.8263272966824561 0.9461438959317796 0.8454576320604761 1.0984247324491494 1.0 18.240843209531484 -4.2610393322954145 6.698569237183385 0.9816013441622796 0.5688870805790942 0.4440667940466405 0.13730318539503286 0.11411707471180561 34.07741396658771 0.035454552152892775 0.2132742849078741 5.482273119412414e-05 4.2610393322954145 -0.4127142635831854 HRHPECYVCTDCGTNLK ddPTM_KYSE-520_SHP099_60min_R1 1 HRHPECYVCTDCGTNLK 17 1 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 0 155.92 1.767e-06 868230000.0 205290.0 287240.0 234950.0 227590.0 212700.0 264660.0 238410.0 266270.0 216050.0 179200.0 False True 193902.1544645311 273440.55924396985 250095.25293329146 249220.08517257162 229438.27990254748 263008.15876935795 262510.8094573757 265346.371517885 176820.76617728837 177612.42741549035 1.0917150184031552 1.5395350608226748 1.4080954614073338 1.4031680597978025 1.2917918145773688 1.480798177224956 1.4779979828961056 1.4939628683591935 0.995542759874848 1.0 17.438373004004593 -7.76891165465247 24.99104520397925 0.9977710222397188 1.4054193341131718 0.6338255463356945 0.12170474290392817 109.40191815059232 365879.62848258857 0.10503033369508044 0.029253044519453444 1.7025048012616692e-08 7.76891165465247 0.40764831187345296 HRHPLDHDCSGEGHPTSR ddPTM_KYSE-520_SHP099_60min_R1 3 HRHPLDHDCSGEGHPTSR 18 1 A0A087X0D9;E9PFU9;Q8WV99;B8ZZ56;E7EV05;B4DEN4;Q8WV99-2 A0A087X0D9 ZFAND2B AN1-type zinc finger protein 2B 0 ;; 119.76 0.0002697 230262000.0 11853.6 25194.0 63014.0 115347.0 8280.11 13622.2 26214.5 18077.4 18058.8 6975.8 False True 11196.057178434237 23983.64242303502 67075.98326596469 126309.5441996598 8931.707549618626 13537.178796901473 28864.517488865302 18014.69371869687 14779.777145301623 6913.999839090275 1.6193314201620497 3.4688520366223674 9.701473073043978 18.268664613720798 1.2918292967148572 1.9579373896373504 4.174792907236054 2.6055386372509948 2.137659457516896 1.0 12.755304854686514 HRHS(ph)PTGPPGFPR ddPTM_KYSE-520_SHP099_60min_R1 10 HRHSPTGPPGFPR 13 1 P98175-2;P98175;P98175-5 P98175-2 RBM10 RNA-binding protein 10 1 HRHS(0.906)PT(0.094)GPPGFPR;HRHS(0.844)PT(0.156)GPPGFPR;HRHS(0.919)PT(0.081)GPPGFPR;HRHS(0.907)PT(0.093)GPPGFPR;HRHS(0.798)PT(0.202)GPPGFPR;HRHS(0.978)PT(0.022)GPPGFPR;HRHS(0.999)PT(0.001)GPPGFPR;HRHS(0.775)PT(0.225)GPPGFPR;HRHS(0.998)PT(0.002)GPPGFPR;HRHS(0.997)PT(0.003)GPPGFPR 121.82 5.967e-05 20410880000.0 4191824.0 2273296.0 2989272.0 2356003.0 3132789.0 2358468.0 2827058.0 2505951.0 4413583.0 2100484.0 True False 3959295.166526023 2164083.4478731384 3181965.2561243074 2579916.816761868 3379321.671168886 2343747.926382718 3112844.6120672375 2497258.4408743614 3612187.584573269 2081875.3459118241 1.9017926189965626 1.0394875236515704 1.528412958236298 1.2392273254150625 1.6232103799129258 1.1257868685486538 1.4952118138004402 1.1995235189168383 1.7350642975173882 1.0 20.98945225793331 -11.146592043299153 2.5408124475613048 0.03517106515413204 1.4092356549736822 0.18781858039600963 0.2657246498888946 47030105.25140294 37527075.40541592 253270540.473411 0.06013781394242407 7.135229668023624e-12 11.146592043299153 1.3740645898195503 HRHSPT(ph)GPPGFPR ddPTM_KYSE-520_SHP099_60min_R1 2 HRHSPTGPPGFPR 13 1 P98175-2;P98175;P98175-5 P98175-2 RBM10 RNA-binding protein 10 1 HRHS(0.356)PT(0.644)GPPGFPR;HRHS(0.453)PT(0.547)GPPGFPR 136.27 2.6479000000000002e-05 2583190000.0 1616460.0 265852.0 752690.0 248924.0 939760.0 285404.0 738080.0 344386.0 1733170.0 471440.0 True False 1526791.7414668773 253080.0708680125 801209.6017465808 272581.66211827024 1013713.7654970278 283622.68777076196 812692.3293666368 343191.40534629655 1418470.0176602204 467263.40837477025 3.2675183078798002 0.5416218482595768 1.7146850949303691 0.5833576035118186 2.169469612488841 0.6069867288715264 1.739259515726543 0.7344709626203786 3.0356967659717355 1.0 18.833876537911234 -4.2457797078971495 24.510412793249365 1.341402330008425 3.267520179812449 0.3526017888952264 0.780546478927426 2407.1547366353393 3767584.9847413534 0.1761123497204567 4.188127456838493 5.6783256050407177e-05 4.2457797078971495 1.9261178498040241 HRLDLGEDYPSGK ddPTM_KYSE-520_SHP099_60min_R1 2 HRLDLGEDYPSGK 13 1 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 0 ; 82.54299999999999 0.006573899999999999 1666720000.0 4358300.0 4216600.0 2953500.0 3217000.0 4056500.0 4031100.0 3232500.0 3553100.0 3449900.0 3160500.0 False True 4116536.410944346 4014028.2067543683 3143887.335767086 3522742.712773679 4375723.471672235 4005940.4096393795 3559272.6461598375 3540775.125399776 2823485.124901772 3132500.4288317943 1.3141375410695566 1.2814134580186867 1.003635085515228 1.124578525305236 1.3968788101025342 1.2788315598517948 1.1362401145742858 1.1303350808223958 0.9013518717872088 1.0 21.578883276372814 -7.490299757276471 2.0445787758499536 0.9533068045069412 1.2223991823366744 0.48452113921164786 0.10847597855355813 0.32217100893129236 2.449448976668357 0.0984579427914523 0.032986193504539706 3.233703842663254e-08 7.490299757276471 0.2690923778297333 HRLDMERER ddPTM_KYSE-520_SHP099_60min_R1 1 HRLDMERER 9 2 H7BXK5 H7BXK5 BAZ2B 0 53.756 0.040539 122630000.0 150540.0 168960.0 122180.0 79665.0 172850.0 169370.0 131170.0 175970.0 149960.0 95113.0 False True 142189.24610594992 160842.9079858696 130055.91829491209 87236.33764784435 186452.31161803173 168312.8990053886 144429.9436958348 175359.60114170687 122731.04418396745 94270.37281679435 1.5083131832127303 1.7061872482296505 1.3796054307291603 0.9253844558075528 1.977846337580359 1.7854273190633179 1.5320820251397635 1.860177231742807 1.301904729097484 1.0 16.52451681316253 -8.001721432126795 22.607664848605946 0.9999999870958786 1.5779277676953511 0.30958744260567317 0.27770465001175476 18.640008982420298 244816.04286535547 0.2781298776440553 0.07181282560960095 9.960441013103447e-09 8.001721432126795 0.5779277805994726 HRMS(ph)PGVAGSPR ddPTM_KYSE-520_SHP099_60min_R1 2 HRMSPGVAGSPR 12 1 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 HRMS(1)PGVAGSPR;HRMS(1)PGVAGSPR 109.1 0.00015892 1718180000.0 411970.0 335850.0 347510.0 393450.0 316630.0 369400.0 359810.0 367640.0 396250.0 310710.0 True False 389117.2028581657 319715.2618788723 369911.0506356588 430843.3697049443 341546.9796217379 367094.4375780273 396183.1062071992 366364.74264782114 324300.9886496209 307957.351128722 1.2635425049344575 1.0381803217460317 1.201176231968046 1.3990358344290914 1.109072338653075 1.1920301179126158 1.2864869266965477 1.1896606504278109 1.0530711069600915 1.0 18.23237104102102 -7.817517942830726 3.327736891378998 1.0040908793419254 1.2100785060472095 0.3957542579575075 0.09203352664411059 0.24321991473592564 5.047633414657497 0.08784560387873071 0.02409123030059062 1.5222362405514666e-08 7.817517942830726 0.20598762670528403 HRPDLIDFDK ddPTM_KYSE-520_SHP099_60min_R1 5 HRPDLIDFDK 10 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2;F8W6C1;P11277-3;P11277;P11277-2 A0A087WUZ3 SPTBN1;SPTB Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, erythrocytic 0 ;;;; 114.83 0.00060058 2264710000.0 5552240.0 4821350.0 3390960.0 3308640.0 4883810.0 4836920.0 3849910.0 4523840.0 4177570.0 3856800.0 False True 5244246.179083958 4589725.109006109 3609546.7073278353 3623092.1508211102 5268138.061922235 4806730.988115627 4239096.474300768 4508147.854912197 3419028.5959697017 3822631.7525449977 1.3718941605066957 1.2006715284438274 0.9442569781734019 0.9478004645383276 1.378144274141725 1.2574402399382165 1.108947120391207 1.1793309287275193 0.8944174634905419 1.0 21.86613479634324 -7.754979468261508 24.911817585343094 0.9472087030223082 1.1667572786799436 0.2870746238545854 0.1423592717642768 185.67008656552855 716034.8137864905 0.10864598025181776 0.038862118692876375 1.7580067236518172e-08 7.754979468261508 0.21954857565763541 HRPELIDY(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 2 HRPELIDYGK 10 1 P12814-3;P12814;P12814-2;P12814-4;H9KV75;G3V2N5;G3V2W4;G3V2X9 P12814-3 ACTN1 Alpha-actinin-1 1 HRPELIDY(1)GK;HRPELIDY(1)GK 106.16 0.0018991 1242720000.0 1413360.0 1252870.0 1253350.0 1290640.0 1232390.0 1277360.0 1282270.0 1335040.0 1497370.0 1190620.0 True False 1334958.1033366907 1192680.2446037908 1334142.946430903 1413302.0375549344 1329372.0816600875 1269387.522427366 1411894.3653492273 1330409.0578406795 1225485.3536259502 1180072.0330883428 1.1312513693278525 1.0106842727917646 1.130560600558717 1.1976404811969064 1.126517741617022 1.0756864723802306 1.1964476114684177 1.1273964813477468 1.0384835156365473 1.0 20.170443495527824 -7.875746505889304 3.708658683992593 1.002149643131866 1.124289463512678 0.41338217388691145 0.051053903959175036 0.22180615155091696 5.387909598016196 0.051217624906110475 0.013649839893527468 1.3312312199439184e-08 7.875746505889304 0.12213982038081195 HRPELIDYGK ddPTM_KYSE-520_SHP099_60min_R1 6 HRPELIDYGK 10 1 P12814-3;P12814;P12814-2;P12814-4;H9KV75;G3V2N5;G3V2W4;G3V2X9 P12814-3 ACTN1 Alpha-actinin-1 0 ;;;;; 155.97 0.00038689999999999997 5623310000.0 10975950.0 8983030.0 6641360.0 6282000.0 9400080.0 9467030.0 7103790.0 8096960.0 8180010.0 7484620.0 False True 10367092.173486121 8551471.754997073 7069472.69215171 6879039.391247823 10139812.816861017 9407942.754153527 7821910.419509294 8068873.535604678 6694726.385271375 7418312.089746244 1.3975001385848602 1.1527516841488925 0.9529759070022535 0.9273052020494236 1.366862528050888 1.2682053060503338 1.0544056821660164 1.087696694071102 0.9024595223656031 1.0 22.82265953288605 -7.393076334369638 1.968393914348897 0.9602667381594173 1.1593097115367292 0.23184912229857135 0.149837306979426 0.6129189468361266 4.3284517414986174 0.1292042573704326 0.04655726945175672 4.045047871059528e-08 7.393076334369638 0.19904297337731192 HRPELIEYDK ddPTM_KYSE-520_SHP099_60min_R1 9 HRPELIEYDK 10 1 O43707;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ;;;;;;;; 172.13 4.3323000000000005e-05 31627300000.0 54065450.0 43852130.0 31342560.0 33654630.0 47438160.0 44846860.0 39387340.0 45899280.0 37792590.0 34504400.0 False True 51066331.711697474 41745407.85141088 33362951.56746914 36853155.916566566 51171273.305791356 44566954.111641936 43368996.71059468 45740066.110652454 30930408.32966501 34198717.86001703 1.4932235740744242 1.2206717229073947 0.9755614729192811 1.077618057712419 1.496292156777537 1.303176168593934 1.2681468611809845 1.33747897502698 0.904431811048299 1.0 25.027438902431808 -7.7645621380394045 24.999827684221366 0.9522157647336019 1.2619324558087905 0.40546727508718705 0.15431017324777485 91.64949872873599 733656.3872930577 0.13827026536391387 0.04158480841927045 1.719641280588639e-08 7.7645621380394045 0.3097166910751886 HRPELIEYDKLR ddPTM_KYSE-520_SHP099_60min_R1 2 HRPELIEYDKLR 12 2 O43707;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ; 145.29 3.8228e-05 6700600000.0 5965200.0 5788600.0 5035400.0 4249200.0 5253900.0 4862800.0 4023200.0 4006700.0 5473200.0 3126900.0 False True 5634298.464668615 5510506.967134258 5359989.940924867 4653042.690431432 5667352.039398183 4832449.461435923 4429904.3186481865 3992801.6928708144 4479404.848144113 3099198.0986913857 1.817985906434202 1.7780428329060443 1.7294763904211494 1.5013698841633085 1.8286511087468664 1.5592580104758036 1.4293711397534357 1.2883338094963166 1.4453431841080149 1.0 21.563463543307847 -7.479508961248973 0.2592015296643774 0.8928468186312526 1.9172171625529202 0.8358265597415226 0.1017897232312243 0.7343899644380694 0.20293374325129657 0.283130005603381 0.2667535268625072 3.315057294393532e-08 7.479508961248973 1.0243703439216676 HRPS(ph)AGGPDSAGR ddPTM_KYSE-520_SHP099_60min_R1 1 HRPSAGGPDSAGR 13 1 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 HRPS(1)AGGPDSAGR 61.423 0.031351 189500000.0 247970.0 270820.0 272000.0 348640.0 276780.0 265960.0 258580.0 246630.0 317870.0 222910.0 True False 234214.60978406025 257809.4006908926 289533.5552153878 381774.64077756176 298561.0113372214 264300.04498714727 284719.7898976061 245774.49809387486 260152.82085061166 220935.19082135582 1.0601054947984359 1.166900572663196 1.3104908916456832 1.7279938037859157 1.351351091816932 1.1962786191035337 1.2887027586647588 1.1124280255226686 1.177507394288158 1.0 17.753263705623965 -7.5030616475182725 0.9870047055850695 1.0301626726873132 1.322529989106649 0.24640580319577443 0.16816656636628158 0.8202538759382577 1.486416026163006 0.17151990336854833 0.0636108015446097 3.1400629345243173e-08 7.5030616475182725 0.2923673164193359 HRPS(ph)EADEEELAR ddPTM_KYSE-520_SHP099_60min_R1 2 HRPSEADEEELAR 13 1 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 HRPS(1)EADEEELAR;HRPS(1)EADEEELAR 162.37 6.707399999999999e-07 1004560000.0 1363330.0 1207180.0 1231280.0 1401340.0 1164670.0 1493550.0 1196570.0 1614300.0 1723160.0 1211050.0 True False 1287703.3671690223 1149185.260785878 1310650.2789176558 1534522.932271766 1256322.902934178 1484228.2004457568 1317530.9729978265 1608700.3700804524 1410277.581328658 1200321.0391826434 1.0727991305108522 0.9573982486955438 1.0919164424628771 1.2784270892366403 1.0466557378596555 1.2365260226184485 1.0976488205980268 1.3402250877614328 1.1749169891156652 1.0 20.194988891568258 -5.005382797934654 10.933331238342406 1.1775002426234151 1.0173869096364179 0.26739867115254445 0.10091012268286378 0.21395185097921773 407.39530101057903 0.025238146125868513 0.04870208679371234 9.87682143320882e-06 5.005382797934654 -0.16011333298699726 HRPS(ph)PPAT(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 13 HRPSPPATPPPK 12 1 A9Z1X7;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK;HRPS(1)PPAT(1)PPPK 125.33 0.00018437 168986300000.0 37001880.0 34633420.0 32456670.0 34352130.0 33758170.0 34153280.0 32511660.0 34016940.0 39995850.0 32957760.0 True False 34949311.95498091 32969578.517376747 34548878.880708165 37616946.106855474 36414745.92128713 33940116.71100407 35798255.876024455 33898943.17475344 32733611.85332981 32665779.887149304 1.0699059405812608 1.0093002105346016 1.0576474524736412 1.151570427426224 1.1147673818622852 1.0390113699491403 1.0958947252965316 1.0377509213575906 1.0020765451311693 1.0 24.96127674833729 -7.546698739051454 3.0641622705383758 1.0009944299658757 1.076378209319532 0.40154844282612245 0.03725259696334971 0.2966885886377048 5.511533944320435 0.032101340148479096 0.010998647533483768 2.839888316135707e-08 7.546698739051454 0.07538377935365626 HRPS(ph)PPATPPPK ddPTM_KYSE-520_SHP099_60min_R1 8 HRPSPPATPPPK 12 1 A9Z1X7;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 HRPS(1)PPATPPPK;HRPS(1)PPATPPPK;HRPS(1)PPATPPPK;HRPS(0.999)PPAT(0.001)PPPK;HRPS(1)PPATPPPK;HRPS(1)PPATPPPK;HRPS(1)PPATPPPK;HRPS(1)PPATPPPK 135.47 2.8838e-05 28513790000.0 9610640.0 9542690.0 9375380.0 9116120.0 8965540.0 9484260.0 9457840.0 9404360.0 11447830.0 8789170.0 True False 9077518.640864141 9084244.848530287 9979731.995938381 9982513.303938577 9671076.991055412 9425065.215332389 10413930.766823316 9371738.470154129 9369192.64830986 8711304.791670782 1.0420389204546614 1.0428110444736232 1.145607028407546 1.1459263041149985 1.1101754814390499 1.0819349616080545 1.1954501668659878 1.075813405026858 1.0755211615679101 1.0 23.054457393256268 -8.099809033516847 1.9108068452044344 1.0008619004244095 1.1085136346589037 0.3310204588434593 0.045411663379760624 0.5663196276477942 4.424115943760485 0.045586698957646915 0.012797723047790487 7.946775908201674e-09 8.099809033516847 0.10765173423449426 HRPSAGGPDS(ph)AGR ddPTM_KYSE-520_SHP099_60min_R1 8 HRPSAGGPDSAGR 13 1 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 HRPSAGGPDS(1)AGR;HRPSAGGPDS(1)AGR;HRPSAGGPDS(1)AGR;HRPSAGGPDS(1)AGR;HRPSAGGPDS(1)AGR;HRPSAGGPDS(1)AGR;HRPSAGGPDS(1)AGR;HRPSAGGPDS(1)AGR 121.19 6.2196e-05 1288013000.0 189371.0 188137.8 186024.1 235907.4 183461.0 155543.0 159491.4 160967.2 195307.0 141097.69999999998 True False 178866.21312827067 179099.37768740472 198015.51113508394 258327.96836785367 197898.33694970017 154572.1984412539 175614.3471980627 160408.84235322688 159844.17208881117 139847.68415034952 1.2790073301176195 1.280674605200154 1.4159370055938751 1.8472094832126544 1.4150991355490785 1.1052896541002002 1.2557544178512146 1.1470253749842019 1.1429876229982008 1.0 17.093496837707693 -6.210688837218136 5.850576750525351 1.1472234354650361 1.4611095301014139 0.4970300292084868 0.15915787825336558 0.20810206260356015 16.918314523400984 0.05775412530726184 0.05721052420877626 6.15617791822699e-07 6.210688837218136 0.31388609463637773 HRRACKDSVGR ddPTM_KYSE-520_SHP099_60min_R1 1 HRRACKDSVGR 11 3 O15054;O15054-1 O15054 KDM6B Lysine-specific demethylase 6B 0 49.368 0.046218 585480000.0 246260.0 403970.0 338700.0 548090.0 571760.0 296280.0 263650.0 337260.0 472470.0 206200.0 False True 232599.4668928608 384562.67482866754 360533.14393916057 600180.308810732 616754.2591306084 294430.80662051414 290302.3149760376 336090.1237770758 386681.35799946013 204373.22842117268 1.138111232521705 1.881668542399106 1.7640918369023035 2.936687517476014 3.01778400182435 1.4406525203670544 1.420451774523922 1.64449192476649 1.8920352777448255 1.0 17.640846699315098 HRS(ph)EDCGGGPR ddPTM_KYSE-520_SHP099_60min_R1 2 HRSEDCGGGPR 11 1 Q9UGU0;Q9UGU0-2;A9JX13 Q9UGU0 TCF20 Transcription factor 20 1 HRS(1)EDCGGGPR;HRS(1)EDCGGGPR 97.45200000000001 0.0020656999999999997 1539500000.0 789550.0 800900.0 819540.0 892470.0 912150.0 858000.0 926450.0 1157600.0 1364260.0 921420.0 True False 745752.0875710957 762423.5618245921 872368.8597103632 977290.0804691094 983931.01557644 852644.9037410606 1020104.6072806756 1153584.5557858718 1116544.7741959163 913256.9356539123 0.8165851891802175 0.8348401551187562 0.9552282886148877 1.0701151475727342 1.0773868526625792 0.9336309098277452 1.1169962881806728 1.2631544429059054 1.2225965449651313 1.0 19.80066127949332 -4.6983003880314875 0.5027970816060117 1.1543332593641038 0.6415748943220139 0.6088100997209535 0.08895489944879913 2.093142398905091 0.5567614986512853 0.06442143591504815 0.6035258169607356 2.0030860755608218e-05 4.6983003880314875 -0.5127583650420899 HRS(ph)EPQHPK ddPTM_KYSE-520_SHP099_60min_R1 9 HRSEPQHPK 9 1 A0A087WZ32;A0A087X038;A8K727;Q9HB19 A0A087WZ32 PLEKHA2 Pleckstrin homology domain-containing family A member 2 1 HRS(1)EPQHPK;HRS(1)EPQHPK;HRS(1)EPQHPK;HRS(1)EPQHPK;HRS(1)EPQHPK;HRS(1)EPQHPK;HRS(1)EPQHPK;HRS(1)EPQHPK;HRS(1)EPQHPK 121.56 0.00046802 14510628000.0 10741170.0 8975766.0 9479400.0 9881930.0 10016200.0 10633580.0 10347430.0 10124540.0 12393310.0 7004743.0 True False 10145335.888108466 8544556.728460556 10090457.291576264 10821105.656089406 10804417.955617758 10567211.882893767 11393449.205585053 10089420.333825413 10142997.313921072 6942686.426627591 1.46129830222457 1.2307277332430342 1.4533937832588677 1.5586337897368867 1.5562301523771975 1.522063828544074 1.6410721305066085 1.4532444235316484 1.4609614622690126 1.0 22.72706258147057 -8.544596056669995 2.1431940743445157 1.0000131003670367 1.485844712317348 0.6697084637180561 0.10167681975901635 4.958741137864786 18.622522659164375 0.10868799822111697 0.0297965441733854 2.8536712728026734e-09 8.544596056669995 0.4858316119503112 HRS(ph)NS(ph)FSDER ddPTM_KYSE-520_SHP099_60min_R1 3 HRSNSFSDER 10 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 HRS(1)NS(0.999)FS(0.001)DER;HRS(1)NS(0.5)FS(0.5)DER;HRS(0.998)NS(0.989)FS(0.014)DER 152.16 0.00032873 1510280000.0 823580.0 1065920.0 847690.0 1421430.0 1207410.0 1261280.0 1552970.0 1724260.0 1979470.0 1544840.0 True False 777894.3756339734 1014711.6032214604 902333.4537519563 1556522.279831488 1302426.2977768441 1253407.8836719408 1709959.3631266316 1718278.9445053109 1620048.146377956 1531153.9194673316 0.5080445314763604 0.6627103848413001 0.5893159677022323 1.0165681320745217 0.8506174860786962 0.818603451773147 1.1167782294032882 1.1222117663409552 1.058057015549129 1.0 20.546187886577677 -5.006699020123701 0.519419731185783 1.0816817643124799 0.35448892620238476 0.7669301436296615 0.10284940911502269 1.0529804489658423 0.3723555877306498 0.07312055627954453 0.42880129074497403 9.846932930872558e-06 5.006699020123701 -0.7271928381100952 HRS(ph)PTPK ddPTM_KYSE-520_SHP099_60min_R1 1 HRSPTPK 7 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HRS(0.997)PT(0.003)PK 44.309 0.065349 236490000.0 107780.0 181330.0 57408.0 56845.0 115070.0 123440.0 167270.0 69415.0 87245.0 817850.0 True False 101801.22854589668 172618.6346181209 61108.611536047654 62247.53170892757 124125.3543412607 122669.56517225681 184179.28399788257 69174.21556658285 71403.50726747284 810604.4852776718 0.12558680638317066 0.21295050515170855 0.07538647101750856 0.07679149676504039 0.1531269029417493 0.1513309726262327 0.22721226855140347 0.08533658130806825 0.08808674090054366 1.0 19.628638632636704 -11.113833862957993 2.5837934896587917 2.703933017211169 0.1343988642915048 0.961832915660498 0.051819659025247586 9941513.324624827 2487500.145111555 99678913.91759366 0.01418785892986517 7.694247233265534e-12 11.113833862957993 -2.5695341529196645 HRSPLEK ddPTM_KYSE-520_SHP099_60min_R1 1 HRSPLEK 7 1 H7C1I0;Q96K37-2;Q96K37 H7C1I0 SLC35E1 Solute carrier family 35 member E1 0 63.486000000000004 0.040445 338470000.0 228830.0 234150.0 126030.0 170290.0 279660.0 276480.0 178320.0 187640.0 185690.0 301650.0 False True 216136.3437387045 222901.08253368465 134154.09545512986 186474.31040044437 301667.6509522632 274754.3857649515 196346.32583549028 186989.1206355054 151973.37686396993 298977.6156801489 0.7229181463870215 0.7455443847413241 0.4487094966957329 0.6237065941416083 1.0089974470697236 0.9189797876336275 0.65672584012291 0.625428496411415 0.5083102175333204 1.0 18.189677948973497 HRT(ph)KS(ph)RS(ph)PS(ph)PAPEK ddPTM_KYSE-520_SHP099_60min_R1 4 HRTKSRSPSPAPEK 14 3 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 4 HRT(1)KS(1)RS(1)PS(1)PAPEK;HRT(1)KS(1)RS(1)PS(1)PAPEK;HRT(1)KS(1)RS(1)PS(1)PAPEK;HRT(1)KS(1)RS(1)PS(1)PAPEK 88.755 0.0013748 10023430000.0 4451390.0 4647570.0 3844500.0 4501720.0 3919810.0 4198820.0 4310720.0 5049980.0 5714940.0 3661010.0 True False 4204462.523074034 4424293.761055205 4092322.6214174856 4929562.115308529 4228276.746331946 4172613.606906801 4746489.6461729705 5032462.79805419 4677250.957913592 3628576.299622677 1.158708588685662 1.219291919399703 1.1278039328656344 1.3585389167153896 1.165271554789031 1.14993134010733 1.3080859417691015 1.386897334521393 1.2890044391239517 1.0 21.790972175846544 -6.770891599113413 24.993135505562687 1.2782383760063114 1.2004338649745305 0.012590852868459401 0.112421525760449 492.06778344074246 1301090.4257109112 0.044771857950654366 0.030650513947108715 1.6947607637849888e-07 6.770891599113413 -0.07780451103178088 HRTPS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 2 HRTPSLR 7 1 P49023-3 P49023-3 PXN Paxillin 1 HRT(0.002)PS(0.998)LR;HRT(0.011)PS(0.989)LR 109.71 0.0019814 854170000.0 123117.0 135788.0 152986.0 190307.0 124192.0 154029.0 133803.0 129622.0 148057.0 122526.0 True False 116287.45458234516 129264.54065805662 162847.72234625454 208393.72006211424 133965.20384418045 153067.64787684346 147329.1130314383 129172.37153600238 121173.5810132413 121440.51496378545 0.9575672057799082 1.0644268158497545 1.3409669943742997 1.7160147922977678 1.1031343525192556 1.2604331258187556 1.2131792513838815 1.0636678506717683 0.9978019366055575 1.0 16.88989028800807 -7.314539885768376 2.0682758116065796 0.996463092208856 1.2535191466851066 0.2142838481388154 0.19175449960912205 0.5783861654620525 4.603138595950582 0.15416639177059185 0.0602714281038446 4.8468559687291994e-08 7.314539885768376 0.2570560544762506 HRWPT(ph)GDNIHAEHQVR ddPTM_KYSE-520_SHP099_60min_R1 9 HRWPTGDNIHAEHQVR 16 1 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4 Q5T1Z4 PUM1 Pumilio homolog 1 1 HRWPT(1)GDNIHAEHQVR;HRWPT(1)GDNIHAEHQVR;HRWPT(1)GDNIHAEHQVR;HRWPT(1)GDNIHAEHQVR;HRWPT(1)GDNIHAEHQVR;HRWPT(1)GDNIHAEHQVR;HRWPT(1)GDNIHAEHQVR;HRWPT(1)GDNIHAEHQVR;HRWPT(1)GDNIHAEHQVR 227.4 2.7411e-18 14662860000.0 6204990.0 5505067.0 6618693.0 7639801.0 5732622.0 4843102.0 6126738.0 6147793.0 8048889.0 3817816.0 True False 5860786.835359105 5240595.318045966 7045344.541063223 8365885.390050067 6183746.737242594 4812874.403960528 6746088.468240696 6126467.74098867 6587413.653579952 3783993.1204559025 1.548836546154446 1.38493785565196 1.8618809064363169 2.210861680700447 1.634185512604094 1.27190358194432 1.7827961768143792 1.6190483296255416 1.7408630100221452 1.0 21.851478035091024 -5.997038329648702 24.999525553093516 1.5306536884321351 1.7569635187562698 0.14797504047764132 0.2937470835538967 219.85820079566128 1855793.8805236702 0.09485566008321594 0.10698097982724762 1.006842803725415e-06 5.997038329648702 0.22630983032413465 HRWPTGDNIHAEHQVR ddPTM_KYSE-520_SHP099_60min_R1 4 HRWPTGDNIHAEHQVR 16 1 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4 Q5T1Z4 PUM1 Pumilio homolog 1 0 ;;; 262.36 1.0713e-28 5122020000.0 714930.0 668950.0 664790.0 844490.0 567262.0 470765.0 608604.0 583197.0 687890.0 279086.0 False True 675271.4077223776 636812.6378855787 707643.4271016085 924750.0756948226 611902.2921207284 467826.7810135897 670127.631722649 581174.025726203 562986.516295741 276613.51516562223 2.4412090179977617 2.3021747057597217 2.5582388000018987 3.3431124113408877 2.212120010673926 1.6912650878012183 2.4226134840931772 2.1010326461388744 2.0352820286407662 1.0 18.077512121836556 -5.990920803754408 24.995114205316113 1.9543116619931398 2.646865751541519 0.42790787849813716 0.43370668076180713 220.5683925919594 607222.4752771342 0.13315796162223179 0.15078576619773157 1.0211256752207342e-06 5.990920803754408 0.692554089548379 HS(ph)ASSPKAPDPEGLARPVS(ph)PDS(ph)PEIISELQQYADVAAAR ddPTM_KYSE-520_SHP099_60min_R1 1 HSASSPKAPDPEGLARPVSPDSPEIISELQQYADVAAAR 39 2 H0Y760;Q9Y4B4 H0Y760 RAD54L2 Helicase ARIP4 3 HS(0.342)AS(0.342)S(0.342)PKAPDPEGLARPVS(0.824)PDS(0.824)PEIIS(0.324)ELQQY(0.004)ADVAAAR 55.919 0.023474000000000002 69042000.0 18935.0 23575.0 21047.0 24996.0 22535.0 18845.0 15694.0 16865.0 32252.0 17552.0 True False 17884.637804013302 22442.42161320357 22403.723296390657 27371.612324678557 24308.37629338931 18727.381364802175 17280.50267867982 16806.499251320598 26395.84980675726 17396.502935249373 1.0280593674821192 1.2900536215086071 1.2878291332331793 1.5733973906455236 1.3973139534920473 1.076502641623227 0.993331978444098 0.966084926026524 1.5173078120932633 1.0 14.086509702575457 -6.2687755574115425 24.428537955628773 1.101193672600945 1.3267355871284363 0.21800198589385034 0.19281582703477013 642.4485561799189 2139263.537544248 0.0689730087594038 0.06211366882024994 5.385480312416448e-07 6.2687755574115425 0.22554191452749128 HS(ph)DENDGGQPHKR ddPTM_KYSE-520_SHP099_60min_R1 4 HSDENDGGQPHKR 13 1 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 HS(1)DENDGGQPHKR;HS(1)DENDGGQPHKR;HS(1)DENDGGQPHKR;HS(1)DENDGGQPHKR 120.3 6.0524e-05 604110000.0 337765.0 394569.0 249317.0 279236.0 468195.0 528114.0 347965.0 409926.0 438577.0 543824.0 True False 319028.5021321653 375613.3129798561 265388.37274130457 305774.50548463495 505039.28283485206 524817.8446320588 383140.6980111392 408504.06238344766 358942.4724264596 539006.1424486698 0.5918828692430843 0.6968627690836124 0.4923661380474488 0.5672931742401326 0.9369824257298656 0.9736769274054011 0.7108280738148103 0.7578838722090259 0.6659339182960093 1.0 19.039942188286098 -5.74824384885196 24.971588364338878 0.828915225983926 0.5881744869235274 0.5438946734428792 0.11353396823523505 199.36152617398747 377275.546277732 0.03537743754902012 0.04539572575436045 1.7854847744826827e-06 5.74824384885196 -0.2407407390603986 HS(ph)FNSFR ddPTM_KYSE-520_SHP099_60min_R1 1 HSFNSFR 7 0 P51828 P51828 ADCY7 Adenylate cyclase type 7 1 HS(1)FNSFR 76.825 0.01935 52528000.0 20377.0 23827.0 18932.0 18588.0 19131.0 19975.0 14395.0 17555.0 28618.0 19434.0 True False 19246.647189457584 22682.315154943855 20152.38701227101 20354.59793131402 20636.500859499924 19850.328615649974 15850.187081661523 17494.105802367794 23421.69260107217 19261.8298794232 0.999211773229197 1.1775784178830617 1.046234295413395 1.0567323073005743 1.0713676212842707 1.0305525871586816 0.8228806494960156 0.9082265761809157 1.2159640463906713 1.0 14.233457145688606 -6.529076721603682 24.997697022452925 0.9716338367304598 1.0717919376157439 0.12278559128741706 0.10197485338477996 296.0162890606307 1193876.3739656948 0.03901316092590775 0.03029993526488792 2.957489956077458e-07 6.529076721603682 0.1001581008852841 HS(ph)HS(ph)HS(ph)PMSTR ddPTM_KYSE-520_SHP099_60min_R1 1 HSHSHSPMSTR 11 0 P62995 P62995 TRA2B Transformer-2 protein homolog beta 3 HS(0.916)HS(0.989)HS(0.982)PMS(0.061)T(0.052)R 55.66 0.031723 76759000.0 120880.0 148980.0 111060.0 201800.0 111620.0 140660.0 142460.0 181560.0 144090.0 119930.0 True False 114174.54543169404 141822.77717646104 118219.1053022829 220979.0113266178 120403.85896907529 139782.08876482229 156861.24707561664 180930.21073642254 117926.88821330926 118867.51350412803 0.9605193384290738 1.19311637802145 0.9945451184875452 1.8590362060441656 1.012924855746174 1.1759486224969948 1.3196309273363338 1.5221165598802502 0.9920867757464608 1.0 16.858994954781654 HS(ph)IHWPCR ddPTM_KYSE-520_SHP099_60min_R1 1 HSIHWPCR 8 0 P13010 P13010 XRCC5 X-ray repair cross-complementing protein 5 1 HS(1)IHWPCR 77.66199999999999 0.0092295 243590000.0 259820.0 219910.0 202390.0 188970.0 185140.0 194090.0 173190.0 197250.0 201710.0 170000.0 True False 245407.26666167058 209345.19350836016 215436.3832354495 206929.65198409773 199709.46469749705 192878.6123159703 190697.7353715148 196565.78578849602 165084.54869530606 168493.93225799873 1.4564753957187122 1.2424494502734365 1.2786002460051336 1.2281133760190606 1.1852620567469512 1.1447214135915211 1.1317780576188197 1.1666045367587097 0.9797655410078969 1.0 17.362337112972053 -1.0000000000000002 0.1734219479164942 0.9691886441400961 2.7678443650086395 0.8473413560104761 0.05073700191321021 21.48904185161003 0.2356106016787627 0.12121820150371204 10.085553295912352 0.09999999999999995 1.0000000000000002 1.7986557208685434 HS(ph)ISGPISTSKPLTALSDK ddPTM_KYSE-520_SHP099_60min_R1 1 HSISGPISTSKPLTALSDK 19 1 Q69YQ0-2;Q69YQ0;A0A494C1J1 Q69YQ0-2 SPECC1L Cytospin-A 1 HS(0.838)IS(0.162)GPISTSKPLTALSDK 193.77 4.2411999999999996e-13 848790000.0 451070.0 503580.0 434920.0 1029300.0 395560.0 354930.0 490830.0 467020.0 398770.0 517930.0 True False 426048.2479142478 479387.2609110098 462955.6390966047 1127124.3625296715 426688.32157147006 352714.7502154011 540447.886439175 465400.01662328717 326363.420173651 513341.5431434431 0.8299508457962403 0.9338563521967956 0.901847211238154 2.195661694605377 0.831197722589618 0.687095667448917 1.0528037203647038 0.9066089094862918 0.6357627286020279 1.0 18.96955949255752 HS(ph)LDSDEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR ddPTM_KYSE-520_SHP099_60min_R1 3 HSLDSDEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR 42 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 HS(0.224)LDS(0.208)DEEEDDDDGGS(0.193)S(0.193)KY(0.18)DILAS(0.003)EDVEGQEAATLPSEGGVR;HS(0.218)LDS(0.218)DEEEDDDDGGS(0.188)S(0.188)KY(0.175)DILAS(0.013)EDVEGQEAATLPSEGGVR;HS(0.418)LDS(0.39)DEEEDDDDGGS(0.063)S(0.063)KY(0.058)DILAS(0.008)EDVEGQEAATLPSEGGVR 80.828 0.0020754000000000002 2869890000.0 374522.0 336769.0 356565.0 359343.0 328331.0 324259.0 281401.0 263185.0 480089.0 332086.0 True False 353746.518068903 320590.11173942545 379549.75042417133 393494.8506795878 354168.7817521543 322235.17930323107 309847.7592891026 262272.07266284095 392916.93965882063 329143.9763989984 1.0747470512420396 0.9740117842861457 1.1531420218490327 1.1955098038998633 1.0760299660560095 0.9790098024233861 0.9413745397348414 0.7968308444597105 1.1937540038178147 1.0 18.328359269948606 -6.244977522861534 4.17378792742753 0.965702709862799 1.0983820110219686 0.21686468863961528 0.10531952517778904 0.3086468352586428 13.04409501722261 0.03702305249168011 0.03518070200035731 5.688823728872238e-07 6.244977522861534 0.1326793011591696 HS(ph)LEEGLDMVNR ddPTM_KYSE-520_SHP099_60min_R1 6 HSLEEGLDMVNR 12 0 Q7Z309;Q7Z309-2;Q7Z309-5 Q7Z309 FAM122B Protein FAM122B 1 HS(1)LEEGLDMVNR;HS(1)LEEGLDMVNR;HS(1)LEEGLDMVNR;HS(1)LEEGLDMVNR;HS(1)LEEGLDMVNR;HS(1)LEEGLDMVNR 236.4 2.0853e-15 1930160000.0 2084490.0 1990200.0 1701930.0 1673450.0 1887870.0 1855150.0 1707090.0 1899720.0 2290840.0 1723230.0 True False 1968859.1843722044 1894587.8046488988 1811639.130984282 1832494.184858911 2036434.6284890543 1843571.320717047 1879659.3167928834 1893130.314717982 1874881.2033768983 1707963.5228526536 1.1527524786265932 1.1092671355677104 1.0607013011369637 1.0729117808079796 1.1923174009523259 1.0793973618581152 1.100526616431165 1.1084137860017416 1.0977290663944963 1.0 20.703845732829684 -9.766573285339067 0.5866002223583148 0.9792919122253472 1.109580409842086 0.4437738938104162 0.03661484224628742 17.14735093973609 3.9768589879131033 0.7156159628104637 0.015618505923154365 1.711696310888837e-10 9.766573285339067 0.13028849761673889 HS(ph)LPFSLPSQMEPRPDVPR ddPTM_KYSE-520_SHP099_60min_R1 2 HSLPFSLPSQMEPRPDVPR 19 1 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 HS(0.941)LPFS(0.052)LPS(0.007)QMEPRPDVPR;HS(0.984)LPFS(0.015)LPS(0.001)QMEPRPDVPR 74.062 0.006882699999999999 888040000.0 690370.0 598240.0 567540.0 837630.0 631340.0 581510.0 665560.0 659750.0 744830.0 657380.0 True False 652073.7998815248 569499.652423453 604124.5364961067 917238.1033573576 681022.8661667802 577880.5803898185 732841.3000396423 657461.4812368071 609587.6476363329 651556.1246339016 1.000794521343674 0.8740607767956218 0.9272026056627953 1.4077653001462278 1.045225177722695 0.8869237177603385 1.1247554467413123 1.0090634657240365 0.935587318711569 1.0 19.313529931424416 -5.092246415773612 24.28277794159812 1.0626494293900348 0.9278724916586655 0.14839721095762715 0.13612561771094248 82.7476518772705 21776.402712031046 0.03816503893674288 0.0661038479269262 8.086369538102238e-06 5.092246415773612 -0.13477693773136934 HS(ph)LTGHSDIR ddPTM_KYSE-520_SHP099_60min_R1 2 HSLTGHSDIR 10 0 H0Y4E8;Q9Y2K2-8;Q9Y2K2-7;Q9Y2K2;Q9Y2K2-6 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 HS(1)LTGHSDIR;HS(1)LTGHSDIR 167.44 3.6e-05 71082000.0 159993.0 166040.0 155231.0 216734.0 96066.0 114731.0 130461.0 106403.0 139850.0 141104.0 True False 151117.86935186156 158063.189168879 165237.43863838178 237332.33419654687 103625.84765922948 114014.92127169653 143649.27105666164 106033.9128276468 114456.76533160733 139853.92833725087 1.0805407552617918 1.1302019975278592 1.1815001595087113 1.6970015573980277 0.7409577184656612 0.8152428939768868 1.0271379057030026 0.7581761491314798 0.8184022193184339 1.0 17.093561252477407 -5.801337294153343 24.999999441518813 0.8540152024669372 1.2556756273881855 0.5575785746427074 0.17964108054527345 120.08346399340398 75243.5595149928 0.05669817911498215 0.06429054123697675 1.5800204421366873e-06 5.801337294153343 0.4016604249212483 HS(ph)NLMLEELDKAQEDILK ddPTM_KYSE-520_SHP099_60min_R1 5 HSNLMLEELDKAQEDILK 18 1 O43491;H0Y5B0;E9PMV8;Q6ZSX4 O43491 EPB41L2 Band 4.1-like protein 2 1 HS(1)NLMLEELDKAQEDILK;HS(1)NLMLEELDKAQEDILK;HS(1)NLMLEELDKAQEDILK;HS(1)NLMLEELDKAQEDILK;HS(1)NLMLEELDKAQEDILK 203.82 2.5363e-13 311242000.0 266107.0 323119.0 357051.0 409334.0 304605.0 259642.0 306102.0 439142.0 513769.0 381624.0 True False 251345.51423884716 307595.8782284931 380067.07876179944 448236.9802892455 328575.6805346285 258021.47796869022 337045.77742763184 437618.7188985132 420481.50066252827 378243.1082589797 0.6645078489222681 0.8132226906772481 1.00482221741254 1.1850499599383093 0.8686891402913696 0.6821577771934584 0.8910824019478488 1.1569773760395379 1.1116699590323489 1.0 18.528954270636465 -4.54194784466313 3.135526746045665 0.9811705258555722 0.6774379851973086 0.34991980439188985 0.14202417521595642 0.3270520094855934 6.238098786475332 0.04192369964981734 0.17519507300948436 2.8711253607990504e-05 4.54194784466313 -0.3037325406582636 HS(ph)PAPRPLVQQPEPLPIQVAFR ddPTM_KYSE-520_SHP099_60min_R1 3 HSPAPRPLVQQPEPLPIQVAFR 22 1 A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4;H3BSV5;H3BMG9 A0A0A0MTL6 FAM65A Protein FAM65A 1 HS(1)PAPRPLVQQPEPLPIQVAFR;HS(1)PAPRPLVQQPEPLPIQVAFR;HS(1)PAPRPLVQQPEPLPIQVAFR 85.146 0.0023029 310811000.0 442904.0 490973.0 475037.0 330076.0 406816.0 413711.0 308370.0 346254.0 444074.0 305503.0 True False 418335.2322127658 467385.92011450295 505658.645106073 361446.3237990321 438830.1047335907 411128.87619069626 339543.0490011783 345052.9256902908 363441.35579455283 302796.48109773727 1.3815723045927164 1.5435645699054183 1.6699620922703373 1.1936939375539297 1.449257610731428 1.357772965855542 1.1213573148876188 1.1395539487095754 1.2002826270535174 1.0 18.207988913801596 -6.5746895592032 0.5419306691496434 1.0374572395766848 1.530549990743284 0.6376794868642245 0.11993999897146881 0.5861044703189385 0.3650217114531061 0.11150689940074822 0.10498709909343397 2.662627669504234e-07 6.5746895592032 0.49309275116659923 HS(ph)PEDFR ddPTM_KYSE-520_SHP099_60min_R1 1 HSPEDFR 7 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 HS(1)PEDFR 89.88600000000001 0.014869 341800000.0 1036100.0 1060000.0 852430.0 867900.0 975440.0 1015000.0 900190.0 1025800.0 1073100.0 977130.0 True False 978625.467585856 1009076.0089075617 907379.001736224 950384.9550563496 1052201.578505599 1008665.0085048666 991189.9902077729 1022241.7392235198 878252.0906496086 968473.3883956366 1.0104825587485033 1.0419243533156723 0.9369168142445081 0.9813227358066574 1.086453785011755 1.0414999736604131 1.023456092944142 1.0555186662557197 0.906841737907236 1.0 19.885352881595633 -3.8911451317941714 16.001869508807506 1.011746344123588 0.9408153544466947 0.0 0.052056060481915085 94032.65327922425 931832.5536690012 0.012664505110314752 257652.815775937 0.00012848572167844458 3.8911451317941714 -0.07093098967689337 HS(ph)PESPSIAVVESELVAEYITTER ddPTM_KYSE-520_SHP099_60min_R1 1 HSPESPSIAVVESELVAEYITTER 24 0 Q7Z589;Q7Z589-5;Q7Z589-7;Q7Z589-2 Q7Z589 EMSY Protein EMSY 1 HS(0.356)PES(0.317)PS(0.317)IAVVES(0.01)ELVAEYITTER 68.88 0.014193 13513000.0 7772.2 9642.9 10490.0 11780.0 10624.0 11718.0 6996.0 11262.0 16098.0 6829.6 True False 7341.060572503417 9179.640609712016 11166.202184593436 12899.56765821386 11460.048357708813 11644.863615428609 7703.2239543802725 11222.934750570557 13175.008997556071 6769.095057348398 1.0844965996649882 1.3561104596613365 1.6495856669159379 1.9056561547633077 1.692995630969609 1.720298432326958 1.1379990809876133 1.6579667821900592 1.946347168408211 1.0 12.724747261218626 -9.574696761117806 14.043053651688828 0.9999994954516265 1.575734709867026 0.27573725496709633 0.278249671744148 0.0 0.0 0.28260419763123074 0.06854158571038192 2.662583515459213e-10 9.574696761117806 0.5757352144153995 HS(ph)PIAPS(ph)SPSPQVLAQK ddPTM_KYSE-520_SHP099_60min_R1 1 HSPIAPSSPSPQVLAQK 17 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 2 HS(1)PIAPS(0.557)S(0.364)PS(0.08)PQVLAQK 116.43 8.4174e-05 542510000.0 676490.0 595620.0 596740.0 574370.0 596850.0 602850.0 682750.0 612720.0 655430.0 647220.0 True False 638963.751150619 567005.5211561534 635206.8152177584 628957.9521093632 643818.699388037 599087.3895341463 751769.0329978742 610594.6173299237 536420.434045731 641486.1343295403 0.9960679069368232 0.8838936507158779 0.9902112940939171 0.9804700654468999 1.003636189363523 0.9339054384399006 1.1719178213939072 0.9518438274088287 0.836215165595714 1.0 19.29105855635317 -3.872483159527906 19.867672719038723 0.9755360821276425 8.01144134925945 0.005888199359019186 0.08384311501992146 6723.613632168973 1073686.776676915 0.020435250725683553 53796.00933823826 0.00013412719443895064 3.872483159527906 7.035905267131807 HS(ph)PIAPSS(ph)PSPQVLAQK ddPTM_KYSE-520_SHP099_60min_R1 4 HSPIAPSSPSPQVLAQK 17 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 2 HS(1)PIAPS(0.094)S(0.897)PS(0.009)PQVLAQK;HS(1)PIAPS(0.008)S(0.847)PS(0.146)PQVLAQK;HS(1)PIAPS(0.021)S(0.979)PSPQVLAQK;HS(0.991)PIAPS(0.445)S(0.533)PS(0.03)PQVLAQK 208.44 4.7349e-18 2786920000.0 2585230.0 2267260.0 2026970.0 1989950.0 2215010.0 2254390.0 2233600.0 2360860.0 2534520.0 2401830.0 True False 2441822.1383717614 2158337.426373358 2157631.7294666674 2179074.249699717 2389318.685317074 2240319.5157864895 2459394.085835301 2352670.7276888643 2074315.0580498097 2380551.654795462 1.0257379349248206 0.9066543135182686 0.9063578709246921 0.9153652454086085 1.0036827726480757 0.9410925872049514 1.033119395196074 0.988288039433871 0.8713589784415058 1.0 21.182864503116022 -5.75126101191688 24.999156093616097 0.973756269079036 0.933954163514906 0.09201896568071866 0.052103985874324514 476.98854832549074 1171530.3853230283 0.015418401467215188 0.01967681457971161 1.7731235095572076e-06 5.75126101191688 -0.03980210556413 HS(ph)PIAPSSPSPQVLAQK ddPTM_KYSE-520_SHP099_60min_R1 2 HSPIAPSSPSPQVLAQK 17 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 HS(1)PIAPSSPSPQVLAQK;HS(1)PIAPSSPSPQVLAQK 214.5 5.337000000000001e-18 1219860000.0 814790.0 772700.0 709360.0 836710.0 835800.0 728440.0 776110.0 962460.0 922540.0 876250.0 True False 769591.9744564046 735578.3321536536 755086.4806161291 916230.666833965 901572.7049485142 723893.5357589023 854566.7729036694 959121.4508998519 755029.9913408739 868487.106712184 0.8861294180518523 0.8469651725036187 0.8694273925086192 1.0549732514769539 1.0380956700227615 0.8335109757695 0.983971743850968 1.104358882805734 0.8693623491996068 1.0 19.728144905732336 -5.2037947934004825 11.385744106967456 0.9838515450771935 0.8653317974505712 0.322540907694977 0.0769934156213373 1.2341773757307626 241.40279426568765 0.021116098740718146 0.03658565222687143 6.254681602091646e-06 5.2037947934004825 -0.11851974762662232 HS(ph)PIKEEPCGSLSETVCK ddPTM_KYSE-520_SHP099_60min_R1 6 HSPIKEEPCGSLSETVCK 18 1 Q68DK7;J3KSZ8;Q68DK7-2;J3KTC2;Q68DK7-3;J3QQY0 Q68DK7;J3QQY0 MSL1 Male-specific lethal 1 homolog 1 HS(0.95)PIKEEPCGS(0.05)LSETVCK;HS(1)PIKEEPCGSLSETVCK;HS(1)PIKEEPCGSLSETVCK;HS(0.986)PIKEEPCGS(0.014)LSETVCK;HS(0.921)PIKEEPCGS(0.073)LS(0.006)ETVCK;HS(0.999)PIKEEPCGS(0.001)LSETVCK 162.4 1.7385e-08 6793160000.0 3845460.0 3403900.0 2803400.0 3706490.0 3699550.0 3435030.0 3779750.0 3785700.0 3886980.0 3393830.0 True False 3632144.6680655414 3240371.5346419383 2984111.6495985966 4058753.695203145 3990683.537439908 3413590.703610316 4161844.016805145 3772568.290289021 3181202.4147919305 3363763.3065597834 1.0797860423123051 0.9633173440957588 0.8871348479779133 1.2066109667371776 1.1863746565216249 1.0148129914353257 1.2372582841036996 1.121532030191308 0.9457271885296343 1.0 21.681644762293498 -5.259923815122078 24.998632329428734 1.1123719287291445 0.9754032080133731 0.24482163744786145 0.09939151746312794 179.98462326657074 2968740.4517013244 0.02743739611595784 0.04445141851307873 5.496372839630286e-06 5.259923815122078 -0.13696872071577137 HS(ph)PIKEEPCGSLSETVCKR ddPTM_KYSE-520_SHP099_60min_R1 4 HSPIKEEPCGSLSETVCKR 19 2 Q68DK7;J3KSZ8;Q68DK7-2;J3KTC2;Q68DK7-3;J3QQY0 Q68DK7;J3QQY0 MSL1 Male-specific lethal 1 homolog 1 HS(1)PIKEEPCGSLSETVCKR;HS(1)PIKEEPCGSLSETVCKR;HS(1)PIKEEPCGSLSETVCKR;HS(1)PIKEEPCGSLSETVCKR 170.28 4.7466e-09 9121950000.0 4843980.0 5043190.0 4576900.0 4329030.0 4476870.0 4149200.0 3555100.0 4029310.0 6161090.0 3527720.0 True False 4575274.77316527 4800907.582417484 4871934.297298919 4740459.7096296735 4829174.199094113 4123303.3037324054 3914484.2024324336 4015333.264058027 5042391.364439849 3496467.1453246283 1.3085421893019047 1.3730738436473269 1.3933876952950994 1.3557855722935863 1.3811581800651382 1.1792770051467418 1.1195541212697409 1.1483972527604644 1.4421389233364839 1.0 21.737466518241575 -6.263930930191506 24.30626309261577 1.183503319419897 1.3643383130529483 0.43505930972689655 0.10502146703852407 149.56657483119784 1459084.8967586465 0.0352280566784609 0.0325196805464177 5.44589256947029e-07 6.263930930191506 0.18083499363305133 HS(ph)PPMVR ddPTM_KYSE-520_SHP099_60min_R1 1 HSPPMVR 7 0 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256;I3L4G9 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 HS(1)PPMVR 95.50200000000001 0.0041308 2201900000.0 1011700.0 913260.0 709370.0 912580.0 1076600.0 1020300.0 867990.0 1009200.0 1068200.0 1015900.0 True False 955578.9842260515 869385.6187687928 755097.1252321296 999311.3288228189 1161322.2949839318 1013931.9292389306 955734.8999660572 1005699.3207490519 874241.8071306619 1006899.9163582408 0.949030751419856 0.8634280375284863 0.7499227211808375 0.9924634142757025 1.1533641786208568 1.0069838250718335 0.9491855987263983 0.9988076316328129 0.8682509482100493 1.0 19.941488859074596 -5.369898399188925 8.866377076631672 1.0011775810544925 0.8553100080335465 0.39703547510604964 0.07972009046877059 0.3398661556602392 25.312530050952052 0.023630922555332806 0.03507731636203727 4.266793264136486e-06 5.369898399188925 -0.145867573020946 HS(ph)PQQEEENTIFK ddPTM_KYSE-520_SHP099_60min_R1 4 HSPQQEEENTIFK 13 0 O14896;A0A2R8YHF3;B1AJU4 O14896 IRF6 Interferon regulatory factor 6 1 HS(1)PQQEEENTIFK;HS(1)PQQEEENTIFK;HS(1)PQQEEENTIFK;HS(1)PQQEEENTIFK 207.39 1.4693e-09 1509280000.0 1463910.0 1281730.0 1156050.0 1289430.0 1407510.0 1302430.0 1375950.0 1424300.0 1497430.0 1314990.0 True False 1382703.9940677646 1220153.766884047 1230570.8327454 1411977.039518735 1518273.0293635854 1294301.0512581205 1515044.453977922 1419359.4357341204 1225534.459138426 1303340.2116467399 1.0608926063293562 0.9361744201403955 0.9441670116128793 1.0833526249717524 1.1649092200149975 0.9930646194233518 1.1624320652730409 1.0890168376994929 0.9403028067322436 1.0 20.31378228990735 -5.268950046331575 24.229568202831867 1.0711940566292428 0.9759876526774297 0.19240556049641733 0.07462185447113477 510.3164245648009 1646294.1514308301 0.020664895985728196 0.03137623677563288 5.383316992520834e-06 5.268950046331575 -0.09520640395181312 HS(ph)PQQPSNGS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 4 HSPQQPSNGSLR 12 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 HS(1)PQQPS(0.161)NGS(0.839)LR;HS(0.998)PQQPS(0.18)NGS(0.823)LR;HS(1)PQQPS(0.244)NGS(0.756)LR;HS(1)PQQPS(0.181)NGS(0.819)LR 86.539 0.010236 1099730000.0 1746460.0 1772440.0 1713080.0 1777970.0 1706320.0 1585240.0 1554180.0 1641680.0 1952350.0 1681630.0 True False 1649580.382318304 1687289.3219133196 1823507.877824912 1946947.7342338264 1840597.6763672533 1575345.929145079 1711291.6817350956 1635985.3952509922 1597852.454738388 1666732.066488344 0.9897093933002818 1.0123338692752746 1.0940617958271366 1.168122803526467 1.1043152726072096 0.9451704690989672 1.0267347200804955 0.9815527211268381 0.9586738545835509 1.0 20.668590773578746 -6.257205662491132 24.998991580508754 0.9840426703549927 1.076674883200634 0.45020166534876693 0.050368498303117924 392.0962503771203 2315228.0206663413 0.018955873238272296 0.018320777204756552 5.530881293269148e-07 6.257205662491132 0.09263221284564138 HS(ph)PQQPSNGSLR ddPTM_KYSE-520_SHP099_60min_R1 4 HSPQQPSNGSLR 12 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 HS(1)PQQPSNGSLR;HS(1)PQQPSNGSLR;HS(0.988)PQQPS(0.009)NGS(0.003)LR;HS(0.997)PQQPS(0.003)NGSLR 214.14 1.0881999999999999e-10 2485800000.0 1055019.0 1165084.0 1185915.0 1351367.0 1041225.0 1088313.0 1021649.0 1055925.0 1203594.0 961115.0 True False 996494.9929417648 1109111.6158132623 1262360.9784310884 1479800.5133766944 1123163.4837401488 1081520.4348777907 1124927.2512533804 1052262.2426297478 985051.6697356504 952600.2688361541 1.0460788491685387 1.1642990791597476 1.3251738632967074 1.5534328109991515 1.1790501435742629 1.1353350090895373 1.1809016730887216 1.1046209801256475 1.034066126119347 1.0 19.86151143028606 -7.1526210213816555 0.9751703184867229 1.011244234225232 1.2598931712433563 0.3321467846207178 0.126469229369793 0.7296028940971975 1.2488519125154147 0.12106610275331611 0.05220432590503278 7.036861100129868e-08 7.1526210213816555 0.2486489370181244 HS(ph)PS(ph)PRPR ddPTM_KYSE-520_SHP099_60min_R1 1 HSPSPRPR 8 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 HS(1)PS(1)PRPR 71.342 0.017887 595140000.0 607200.0 565210.0 420620.0 654530.0 500080.0 567510.0 545700.0 593050.0 581630.0 440090.0 True False 573517.4055768087 538056.4632024941 447733.8382157955 716736.3344083806 539433.4509340188 563967.9595828536 600864.6815187697 590992.8479689105 476020.6536991268 436191.1449848395 1.3148304640543362 1.2335336684131795 1.0264624657416124 1.6431702996476278 1.2366905131757493 1.2929376629194413 1.3775260878797841 1.3548941897696052 1.0913120524619353 1.0 18.73460095689569 -7.8923737664576175 4.256768246075359 1.0039880535051495 1.3079816541681872 0.35344062830071 0.14506740013657157 0.22319603461317764 6.649762308032731 0.13809836331534478 0.03637378394988509 1.2812274464382983e-08 7.8923737664576175 0.3039936006630377 HS(ph)PSPRPR ddPTM_KYSE-520_SHP099_60min_R1 5 HSPSPRPR 8 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 HS(0.972)PS(0.028)PRPR;HS(0.804)PS(0.196)PRPR;HS(0.994)PS(0.006)PRPR;HS(0.98)PS(0.02)PRPR;HS(0.995)PS(0.005)PRPR 98.73 0.0019228 1523023000.0 1666648.0 1733501.0 1250334.0 1851511.0 1769558.0 1869590.0 1494413.0 1413926.0 1919757.0 1865464.0 True False 1574195.7130595814 1650221.0099219496 1330932.5302451323 2027478.048762921 1908812.147192253 1857921.1953208034 1645482.8501053883 1409021.4207188105 1571177.5219357228 1848937.44026903 0.851405612096063 0.8925239837654182 0.7198364321355701 1.096563899137611 1.0323833060108898 1.0048588745384843 0.8899613444281609 0.7620709008487548 0.8497732198592444 1.0 20.81826498057763 -5.246252201840093 24.994267102492447 0.9415045538184081 0.8283822270915717 0.2506701765679088 0.0997156274143446 1469.9511294879696 2419165.749273968 0.030384710959528594 0.05238032357186166 5.6721511874180715e-06 5.246252201840093 -0.11312232672683642 HS(ph)PTEDEESAK ddPTM_KYSE-520_SHP099_60min_R1 2 HSPTEDEESAK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 HS(0.984)PT(0.016)EDEESAK;HS(0.992)PT(0.008)EDEESAK 186.58 9.866799999999999e-07 851250000.0 994710.0 763500.0 678900.0 877020.0 907520.0 884160.0 951650.0 1013390.0 916170.0 915840.0 True False 939531.4533947755 726820.3139631357 722662.9802784068 960371.7171143211 978936.6609175352 878641.6294774996 1047852.0692089745 1009874.7866170052 749816.6227662399 907726.3701127373 1.0350381836743248 0.800704196654402 0.796124255141617 1.0579969346875373 1.0784490713825508 0.967958691525481 1.1543699772419678 1.1125321681373885 0.8260381624399813 1.0 19.791897943786292 -5.272901307946065 24.852557088854585 1.0377227116370558 0.8696304095341648 0.29961915056790267 0.10482690840444474 733.1451356579474 1589655.2977978697 0.029295804518430165 0.04388083107879149 5.334561079358342e-06 5.272901307946065 -0.16809230210289094 HS(ph)PTGPPGFPR ddPTM_KYSE-520_SHP099_60min_R1 2 HSPTGPPGFPR 11 0 P98175-2;P98175;P98175-5 P98175-2 RBM10 RNA-binding protein 10 1 HS(0.996)PT(0.004)GPPGFPR;HS(0.995)PT(0.005)GPPGFPR 155.66 2.2944000000000003e-05 1005380000.0 415760.0 342230.0 327550.0 347030.0 375480.0 381850.0 362320.0 375740.0 438190.0 362670.0 True False 392696.9640029877 325788.75710229727 348664.3970985297 380011.62686162605 405028.13981104165 379466.7325099343 398946.84150243824 374436.6456383755 358625.7418709834 359457.02595299017 1.092472634139984 0.9063357608286225 0.9699751901472863 1.0571823595717504 1.1267776411859907 1.055666477804668 1.1098596291024023 1.0416729083140646 0.997687389529241 1.0 18.45545977736731 -5.278389470058581 10.778229629461787 1.062540515724005 0.981264430454454 0.20593367114328942 0.0575352476944044 0.7226926747285515 455.56278552234016 0.01590945953245063 0.024162371579780222 5.267572599789751e-06 5.278389470058581 -0.0812760852695511 HS(ph)PTPQQSNR ddPTM_KYSE-520_SHP099_60min_R1 6 HSPTPQQSNR 10 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 HS(0.958)PT(0.042)PQQSNR;HS(0.978)PT(0.022)PQQSNR;HS(0.993)PT(0.007)PQQSNR;HS(0.831)PT(0.169)PQQSNR;HS(0.989)PT(0.011)PQQSNR;HS(0.979)PT(0.021)PQQSNR 164.48 3.2894e-05 8588120000.0 4795040.0 4133100.0 3984040.0 4451400.0 4405600.0 4535620.0 4581020.0 4408390.0 5045130.0 4622430.0 True False 4529049.572524737 3934539.67209042 4240857.593089389 4874459.717637788 4752295.655564944 4507311.513177187 5044114.208046752 4393098.32401596 4129061.569377563 4581478.866396124 0.9885562510708188 0.8587924962284945 0.9256525494846004 1.0639489692707298 1.0372842032343998 0.983811481973008 1.1009794774006119 0.9588821540219508 0.901250816556873 1.0 22.12738193376679 -5.149592612579363 7.345394922547289 1.0090115759224179 0.9163219215065493 0.28242320240394925 0.059723953719349604 0.3214251274767823 18.860676499625537 0.016556705335604358 0.028878444181456592 7.086101803900824e-06 5.149592612579363 -0.09268965441586852 HS(ph)PVQMNR ddPTM_KYSE-520_SHP099_60min_R1 7 HSPVQMNR 8 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 HS(1)PVQMNR;HS(1)PVQMNR;HS(1)PVQMNR;HS(1)PVQMNR;HS(1)PVQMNR;HS(1)PVQMNR;HS(1)PVQMNR 135.56 0.00047781 9213850000.0 3737010.0 3718170.0 3581010.0 2948686.0 2969391.0 3215670.0 3137778.0 2963191.0 3670546.0 2906470.0 True False 3529710.6057552528 3539543.532113048 3811847.63441858 3228928.2308852235 3203065.17817633 3195599.8107377803 3454975.2220022026 2952912.3820349798 3004067.3733347883 2880720.9369994453 1.2252872398781516 1.2287005959695045 1.3232269691450902 1.1208750522875952 1.1118970730683264 1.109305580312931 1.1993439481163002 1.025060200767218 1.042817905320541 1.0 21.45799847893443 -6.150365872686163 0.34202667979142803 0.9911301882964825 1.3054879573655194 0.6695491693159106 0.05649054711417647 1.2935279507614807 0.2992426953295108 0.07096637304343244 0.15192118704675656 7.073496244927376e-07 6.150365872686163 0.3143577690690369 HS(ph)S(ph)ISPVRLPLNSSLGAELSR ddPTM_KYSE-520_SHP099_60min_R1 1 HSSISPVRLPLNSSLGAELSR 21 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 HS(0.667)S(0.667)IS(0.667)PVRLPLNSSLGAELSR 79.51100000000001 0.0077051 283500000.0 232090.0 247060.0 188510.0 201980.0 222180.0 209730.0 187390.0 212250.0 259740.0 175260.0 True False 219215.50504005546 235190.86675537968 200661.65622666455 221176.11847249893 239664.30196872598 208420.99727460684 206333.20995015992 211513.75428952265 212577.76351256124 173707.33275021694 1.2619818724364225 1.3539489843734644 1.155170901824891 1.2732687502060716 1.3797016981047776 1.1998399490383433 1.1878209554161854 1.2176443615864483 1.2237696598464163 1.0 17.406299130609963 -13.906143682575586 0.17713794014737677 1.8470616104535564e-06 1.3065983833515888 0.6077609478224529 0.06319914673282323 89.03656774058834 0.8783741092263673 31.177791197122943 0.21189975479694936 1.2412415856041157e-14 13.906143682575586 1.3065965362899783 HS(ph)S(ph)PHQS(ph)EDEEDPR ddPTM_KYSE-520_SHP099_60min_R1 4 HSSPHQSEDEEDPR 14 0 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 3 HS(1)S(1)PHQS(1)EDEEDPR;HS(1)S(1)PHQS(1)EDEEDPR;HS(1)S(1)PHQS(1)EDEEDPR;HS(1)S(1)PHQS(1)EDEEDPR 129.42 0.00052456 540451000.0 595790.0 588080.0 436316.0 574470.0 517160.0 563290.0 537040.0 565980.0 640280.0 504188.0 True False 562740.34102208 559827.7540739238 464441.6274902837 629067.4560792961 557857.5497621135 559774.2981681832 591329.2442053149 564016.7474807244 524021.29214531055 499721.2865723279 1.1261084051111978 1.1202799822954836 0.9294013282403211 1.2588366214979059 1.11633737595721 1.1201730108552488 1.1833181016989318 1.1286626418286276 1.0486271172069945 1.0 18.93076414814049 -7.928685581658562 3.479507245570638 1.0011423189376987 1.122525053351836 0.21765696591073924 0.07731253153351197 0.3257732671967777 7.881189307807177 0.07383629125151472 0.019635754983573953 1.1784588394785106e-08 7.928685581658562 0.12138273441413738 HS(ph)SADNLANEMTYITETEDVFYTYK ddPTM_KYSE-520_SHP099_60min_R1 5 HSSADNLANEMTYITETEDVFYTYK 25 0 J3KN34;P26045-2;P26045;P26045-3 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 HS(0.5)S(0.5)ADNLANEMTYITETEDVFYTYK;HS(0.5)S(0.5)ADNLANEMTYITETEDVFYTYK;HS(0.5)S(0.5)ADNLANEMTYITETEDVFYTYK;HS(0.499)S(0.499)ADNLANEMT(0.002)YITETEDVFYTYK;HS(0.5)S(0.5)ADNLANEMTYITETEDVFYTYK 251.32 2.7056e-29 594412000.0 437682.0 426240.0 387707.0 472638.0 369420.0 375610.0 353340.0 403234.0 479022.0 309034.0 True False 413402.90696256445 405762.790600716 412699.2135731335 517557.3734162037 398491.2522877246 373265.6786645448 389059.055466084 401835.27536952274 392043.67996194 306296.1991848142 1.349683437348577 1.3247398814631888 1.3473860095930132 1.6897283570401667 1.300999664208309 1.2186428681059875 1.2702052996463467 1.311917276280212 1.2799495423232046 1.0 18.224567939149583 -5.987309379995504 24.9864016844883 1.2413282950469064 1.4248416864994895 0.37933162998077996 0.12565656564469044 277.41026384537935 546186.1020165961 0.03915142453068869 0.04436642415020595 1.0296523617870915e-06 5.987309379995504 0.18351339145258305 HS(ph)SEDFR ddPTM_KYSE-520_SHP099_60min_R1 1 HSSEDFR 7 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 HS(0.521)S(0.479)EDFR 78.516 0.017125 433300000.0 1525700.0 1424700.0 1454000.0 1401600.0 1438700.0 1367300.0 1345700.0 1443300.0 1746700.0 1499900.0 True False 1441066.3795924531 1356255.2734817017 1547727.166482255 1534807.642593593 1551917.504916762 1358766.1735258182 1481736.4887663706 1438293.5291687509 1429543.3107237674 1486612.0529045407 0.9693627713947963 0.9123128464025648 1.0411103310095648 1.0324197490494498 1.0439290478538954 0.9140018546675056 0.9967203520725907 0.9674975568498956 0.9616115434626858 1.0 20.503596779342068 -4.7485580632044275 24.999948326739414 0.9938014282961266 0.9408378184622973 0.2242639201505413 0.04001579484225699 367.48762698516396 713204.4971164251 0.010746644647451087 0.02803228234596547 1.7841934340160045e-05 4.7485580632044275 -0.052963609833829306 HS(ph)SIS(ph)PVRLPLNSSLGAELSR ddPTM_KYSE-520_SHP099_60min_R1 3 HSSISPVRLPLNSSLGAELSR 21 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 HS(0.653)S(0.653)IS(0.692)PVRLPLNS(0.001)S(0.001)LGAELSR;HS(0.516)S(0.516)IS(0.967)PVRLPLNSSLGAELSR;HS(0.682)S(0.318)IS(1)PVRLPLNSSLGAELSR 199.46 2.2091e-13 12432620000.0 3476585.0 4057992.0 3813756.0 4083610.0 3483378.0 3438825.0 3242301.0 3502835.0 5000448.0 3713829.0 True False 3283731.899649619 3863039.973149826 4059596.813985352 4471715.066617883 3757500.030890343 3417362.0176076377 3570064.426888382 3490684.4829528355 4092492.694236011 3680927.3643752416 0.8920936423332445 1.0494746542779156 1.1028733827445087 1.2148338241868188 1.0208025475471716 0.9283970258912353 0.9698817915942016 0.9483165891118593 1.1118102285429432 1.0 21.81163785067083 -5.993152679906542 24.998322293820802 0.9857008118589288 1.0728631745553052 0.13205328543593764 0.08678739641779361 316.021856569807 1153728.5704134798 0.028105406479675642 0.031795913088682466 1.0158914848216145e-06 5.993152679906542 0.08716236269637645 HS(ph)SNPPLESHVGWVMDSR ddPTM_KYSE-520_SHP099_60min_R1 3 HSSNPPLESHVGWVMDSR 18 0 Q6PKG0;Q6PKG0-3;H0YC33;H0YBR8 Q6PKG0 LARP1 La-related protein 1 1 HS(0.568)S(0.432)NPPLESHVGWVMDSR;HS(0.573)S(0.427)NPPLESHVGWVMDSR;HS(0.705)S(0.295)NPPLESHVGWVMDSR 217.94 4.3403e-18 5967890000.0 827610.0 815360.0 832320.0 933130.0 826070.0 748340.0 716440.0 894300.0 1042910.0 784870.0 True False 781700.8235003665 776188.8817196892 885972.6789590849 1021814.3946442364 891077.0093046413 743669.3324773714 788864.7469805884 891197.8820311895 853543.8336216433 777916.6624196203 1.0048644813301415 0.9977789642729119 1.1389043605305595 1.3135268133555595 1.1454658993073226 0.9559755799088729 1.014073595656012 1.1456212793530107 1.0972175746522683 1.0 19.569256083178082 -6.184227253122519 24.999909450812844 1.0498920503803897 1.1251018545493894 0.13884202110054633 0.09527521253569184 292.5381558291516 94717.15983938643 0.03543862756029715 0.03543862664975701 6.542937124318255e-07 6.184227253122519 0.0752098041689997 HS(ph)SPHQS(ph)EDEEDPR ddPTM_KYSE-520_SHP099_60min_R1 3 HSSPHQSEDEEDPR 14 0 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 2 HS(0.5)S(0.5)PHQS(1)EDEEDPR;HS(0.5)S(0.5)PHQS(1)EDEEDPR;HS(0.5)S(0.5)PHQS(1)EDEEDPR 109.89 0.00011594 919470000.0 475027.0 510595.0 482604.0 574022.0 464324.0 487333.0 542666.0 611570.0 650066.0 486527.0 True False 448676.3053671529 486065.2497812806 513713.426033702 628576.8782939925 500863.65715783 484291.37398000184 597523.9751897837 609448.6064115106 532030.4012302945 482216.74929227866 0.9304452946224885 1.0079808519605553 1.0653164303970137 1.303515232966333 1.0386691418183178 1.0043022659224674 1.2391190809251955 1.2638478595070841 1.103301372279425 1.0 18.879322236744414 -4.786278101908083 2.71753718526216 1.1435301563131237 0.9527587260312242 0.2940063582004302 0.10248762367329092 0.32864212140011556 4.824436972485821 0.02861164628874354 0.08565578708785533 1.635768716072528e-05 4.786278101908083 -0.19077143028189947 HS(ph)SPTEERDEPAYPR ddPTM_KYSE-520_SHP099_60min_R1 1 HSSPTEERDEPAYPR 15 1 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 1 HS(0.941)S(0.059)PTEERDEPAYPR 233.52 8.7484e-19 981900000.0 359410.0 361650.0 351380.0 253400.0 300730.0 327170.0 289370.0 250660.0 402920.0 310980.0 True False 339472.8108339276 344275.7911522828 374030.51702787855 277483.05981251167 324395.74008036195 325128.0106724507 318622.34357904765 249790.51896448375 329759.8847866374 308224.95913877874 1.1013800173174149 1.116962727853821 1.213498472261848 0.9002614862463961 1.0524642163527786 1.0548399830464779 1.033733103475204 0.8104162611049782 1.0698675594216318 1.0 18.23362416616548 -5.257871248934349 24.99709835684361 0.9881750580999248 1.1412486375756261 0.4404306712956758 0.0801203400200733 296.00358160603946 2073690.5152190572 0.022158648335833406 0.036517971320589454 5.522411325785403e-06 5.257871248934349 0.15307357947570133 HS(ph)STGDLLSLELQQAK ddPTM_KYSE-520_SHP099_60min_R1 1 HSSTGDLLSLELQQAK 16 0 Q9HBD1;H0Y5D9;Q9HBD1-6;Q9HBD1-4 Q9HBD1 RC3H2 Roquin-2 1 HS(0.375)S(0.251)T(0.375)GDLLSLELQQAK 194.94 1.8047e-12 181510000.0 414100.0 289670.0 285380.0 286720.0 273210.0 293010.0 285600.0 282250.0 330690.0 248190.0 True False 391129.04751211614 275753.81839646545 303776.0514241443 313969.7825944888 294710.07264774304 291181.21590345935 314471.23518739385 281270.9406276453 270645.0320165126 245991.22968889837 1.5900121642823264 1.1209904464691989 1.23490602412259 1.2763454330935373 1.1980511379225134 1.183705680368004 1.278383930943803 1.1434185722123698 1.1002222817406684 1.0 17.908247354595282 -1.0000000000000002 0.11457832166606896 0.9422464504118342 2.2686981323462487 0.5036115361197833 0.10530134192307555 97.16115098879746 0.7733937038000349 0.8418322994176863 20.459587452565824 0.09999999999999995 1.0000000000000002 1.3264516819344145 HS(ph)SYPAGTEDDEGMGEEPSPFR ddPTM_KYSE-520_SHP099_60min_R1 2 HSSYPAGTEDDEGMGEEPSPFR 22 0 Q92934 Q92934 BAD Bcl2-associated agonist of cell death 1 HS(0.471)S(0.471)Y(0.051)PAGT(0.007)EDDEGMGEEPSPFR;HS(0.33)S(0.33)Y(0.288)PAGT(0.051)EDDEGMGEEPSPFR 87.95200000000001 0.0020109000000000004 1582850000.0 820830.0 702890.0 698780.0 609430.0 677100.0 687520.0 709990.0 809100.0 777510.0 656820.0 True False 775296.9236159613 669122.1093405997 743824.4768875317 667350.0439681887 730383.9178279956 683228.9326574045 781762.718034656 806293.42094536 636333.7834320914 651001.0857982276 1.1909303079968414 1.027835627217354 1.1425856163903143 1.0251135651331744 1.1219396307648741 1.0495050585355945 1.200862387312449 1.2385438957551356 0.9774696191970988 1.0 19.31230042408642 HS(ph)VDLIGRPFGSK ddPTM_KYSE-520_SHP099_60min_R1 4 HSVDLIGRPFGSK 13 1 Q96FX7 Q96FX7 TRMT61A tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A 1 HS(1)VDLIGRPFGSK;HS(1)VDLIGRPFGSK;HS(1)VDLIGRPFGSK;HS(1)VDLIGRPFGSK 165.45 5.7472e-07 3006660000.0 3085870.0 2889598.0 2686801.0 2779750.0 2704267.0 2690200.0 2765376.0 2625320.0 3234740.0 2860270.0 True False 2914690.639570664 2750777.3747049775 2859996.4914936 3043936.6042376887 2917077.4277255354 2673409.4639209784 3044927.1935489303 2616213.3776742956 2647392.7571595563 2834930.233056389 1.028134874567366 0.9703157215757353 1.0088419313268908 1.0737254020378366 1.0289767958700635 0.9430247816147236 1.0740748248559684 0.9228492987828167 0.9338475868964701 1.0 21.43488180055444 -7.280768514255499 24.996564666170563 0.9462613283726329 1.0156218350462753 0.331640067395233 0.04252848859902371 954.492131595663 1234348.881951488 0.022961262194735262 0.011054777410848577 5.2387959819160034e-08 7.280768514255499 0.06936050667364246 HS(ph)VTGYGDCAVGAR ddPTM_KYSE-520_SHP099_60min_R1 2 HSVTGYGDCAVGAR 14 0 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 HS(0.998)VT(0.002)GYGDCAVGAR;HS(0.998)VT(0.002)GYGDCAVGAR 268.12 5.1368e-25 2354250000.0 631920.0 521480.0 607240.0 658100.0 521460.0 555010.0 591570.0 651480.0 620810.0 653780.0 True False 596866.137898711 496427.3180425618 646383.662018353 720645.6261350197 562495.9352984594 551545.9767194933 651371.6687668285 649220.1679365744 508086.5533465511 647988.0178331436 0.9211067511628025 0.7661057062484008 0.997524096479198 1.1121280120963368 0.8680653342625567 0.8511669375675338 1.0052217800955636 1.0019015013696566 0.7840986860306157 1.0 19.305607610428613 -4.772377777335461 24.997872994550352 0.9535286659737611 0.8436062093414572 0.16977299991837913 0.09631311376318637 331.257428793449 757037.5822525892 0.025626161117366736 0.0541769164201663 1.688971116515883e-05 4.772377777335461 -0.10992245663230382 HS(ph)YAGEQPETVPYLLLNR ddPTM_KYSE-520_SHP099_60min_R1 8 HSYAGEQPETVPYLLLNR 18 0 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 HS(0.581)Y(0.419)AGEQPETVPYLLLNR;HS(0.585)Y(0.415)AGEQPETVPYLLLNR;HS(0.562)Y(0.438)AGEQPETVPYLLLNR;HS(0.802)Y(0.198)AGEQPETVPYLLLNR;HS(0.824)Y(0.176)AGEQPETVPYLLLNR;HS(1)YAGEQPETVPYLLLNR;HS(0.5)Y(0.5)AGEQPETVPYLLLNR;HS(0.5)Y(0.5)AGEQPETVPYLLLNR 179.42 3.2773000000000003e-09 3400966000.0 2188100.0 2433160.0 2199720.0 2332860.0 2312570.0 2129060.0 2205123.0 2413530.0 2738570.0 2353038.0 True False 2066721.7311307925 2316267.341352381 2341517.47087644 2554574.3130000625 2494556.1022766065 2115771.746805294 2428038.352766567 2405158.027752134 2241314.721731714 2332191.913955865 0.8861713818504834 0.993171842973903 1.0039986232971527 1.0953533873921175 1.069618708198563 0.9072031054324861 1.0410971490970171 1.0312864963469082 0.9610335703162588 1.0 21.153255080812954 -4.235292319381004 2.4438808120459856 1.016647009470696 0.8514309545107939 0.3633217122893425 0.05030310961791591 0.6707050408065842 4.679665912206246 0.013558706204925417 0.23887000126012406 5.8171154160251685e-05 4.235292319381004 -0.16521605495990221 HS(ph)YPPALGSPGALAGAGVGAAGPLER ddPTM_KYSE-520_SHP099_60min_R1 6 HSYPPALGSPGALAGAGVGAAGPLER 26 0 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 HS(0.45)Y(0.45)PPALGS(0.099)PGALAGAGVGAAGPLER;HS(0.396)Y(0.302)PPALGS(0.302)PGALAGAGVGAAGPLER;HS(0.976)Y(0.024)PPALGSPGALAGAGVGAAGPLER;HS(0.982)Y(0.018)PPALGSPGALAGAGVGAAGPLER;HS(0.561)Y(0.435)PPALGS(0.004)PGALAGAGVGAAGPLER;HS(0.999)Y(0.001)PPALGSPGALAGAGVGAAGPLER 305.0 2.2352e-50 12340280000.0 3076240.0 3427030.0 2847850.0 3045880.0 3069780.0 3195700.0 3000340.0 3098950.0 4151700.0 2958010.0 True False 2905594.8348675976 3262390.334723097 3031426.967721111 3335359.5194227835 3311354.221341051 3175754.4509152705 3303643.6476965826 3088200.465750368 3397855.935840074 2931804.3326969566 0.9910602840929534 1.1127585488360456 1.0339799740088766 1.137647380565332 1.129459488278656 1.083208185313617 1.1268295127518186 1.0533446694614654 1.158964088409815 1.0 21.483357391190356 -3.3960596577140483 1.6129775005514124 1.0975061814704614 4.574401426884357e-13 0.2685584730462547 0.04864040186947456 19.78762136129642 5.605404430158829 0.012356386262496424 65.52922421491495 0.00040173562185613133 3.3960596577140483 -1.097506181470004 HSAIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 HSAISPK 7 0 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 HSAIS(1)PK;HSAIS(1)PK;HSAIS(1)PK;HSAIS(1)PK;HSAIS(1)PK;HSAIS(1)PK 112.71 0.0019091999999999998 13582800000.0 17630300.0 15704900.0 13890400.0 15236000.0 15739400.0 15157700.0 15266800.0 14508100.0 17317600.0 15276400.0 True False 16652312.11386826 14950413.030464511 14785797.4094258 16684024.859129576 16978001.235064175 15063095.171836667 16810117.133609578 14457774.787316008 14173160.381170135 15141062.98085937 1.0998112969293727 0.9874084170552708 0.9765362860003501 1.1019057829837142 1.1213216176781629 0.9948505723064974 1.1102336180002783 0.9548718478744098 0.9360743297275222 1.0 23.85196315773738 -7.284813526569611 24.463150733942562 0.9591047850580192 1.0522394401392952 0.3853714336819325 0.05321066709176452 673.0367364275975 704389.0545486767 0.02975283859624841 0.014308387584241536 5.190228444195733e-08 7.284813526569611 0.09313465508127594 HSAS(ph)PVVFTSAR ddPTM_KYSE-520_SHP099_60min_R1 6 HSASPVVFTSAR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 HS(0.001)AS(0.999)PVVFTSAR;HS(0.002)AS(0.998)PVVFTSAR;HS(0.001)AS(0.999)PVVFTSAR;HS(0.002)AS(0.998)PVVFTSAR;HS(0.252)AS(0.748)PVVFTSAR;HS(0.036)AS(0.964)PVVFTSAR 206.67 3.4536e-09 4223160000.0 3148930.0 3156830.0 2711860.0 2692300.0 2908120.0 2795810.0 2617300.0 2617090.0 3355360.0 2647780.0 True False 2974252.5756636695 3005171.148301565 2886670.8347294168 2948175.382530488 3136972.499060634 2778360.3127369406 2881882.226386435 2608011.9256233983 2746111.2057423126 2624322.7291416666 1.1333410112392899 1.1451225548332091 1.0999679279817678 1.123404278670689 1.1953455511497395 1.0586961282942722 1.0981432254443064 0.9937847569823841 1.0464075836589195 1.0 21.32351371729169 -6.89699396816093 1.4375836176438426 1.013378690397625 1.1346120399400899 0.6918132867299693 0.03400936591051816 0.2366441468935653 0.9678033181745603 0.021563776884045635 0.01123335463251264 1.267669472172153e-07 6.89699396816093 0.1212333495424649 HSCDALNR ddPTM_KYSE-520_SHP099_60min_R1 1 HSCDALNR 8 0 Q6P996-4;Q6XYB5;Q86XE2;H3BND4;Q6P996-2;Q6P996-3;Q6P996-5;Q6P996 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 0 66.27 0.046526 121160000.0 72449.0 67520.0 56446.0 52702.0 65390.0 74304.0 57739.0 56290.0 56647.0 56965.0 False True 68430.10954649904 64276.237850413774 60084.59947679327 57710.78223456591 70535.82098179383 73840.24117433066 63575.821598336544 56094.743128184746 46361.332754662595 56460.33441809935 1.2120032630299575 1.1384317594443596 1.064191349485385 1.0221473682250402 1.249298675056773 1.3078250764072674 1.1260263024222577 0.993524811822627 0.8211310335384882 1.0 15.784950053535509 -7.349344504625616 3.205530383748847 0.911102781493735 1.1605452030424042 0.5770224387940958 0.08874609234154324 0.20051708103835764 3.9278313694200815 0.061573065100670295 0.026288697715336613 4.473582958776666e-08 7.349344504625616 0.24944242154866914 HSCSGS(ph)SPPR ddPTM_KYSE-520_SHP099_60min_R1 2 HSCSGSSPPR 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HSCSGS(0.796)S(0.204)PPR;HSCSGS(0.596)S(0.404)PPR 117.95 0.00036869 4342300000.0 30901.0 43020.0 37759.0 40349.0 31806.0 40273.0 31784.0 43841.0 46224.0 20080.4 True False 29186.859930383678 40953.254625663525 40193.00555653608 44183.756828630794 34308.95124861508 40021.64126848919 34997.03690194717 43688.92580356633 37830.886812214645 19902.503278314813 1.4664919041709106 2.057693650541186 2.0194949848509363 2.2200100264157285 1.7238510537514702 2.0108847971951147 1.7584238732460815 2.1951472733165436 1.9008104801286014 1.0 14.280662279669196 -8.056868071107164 23.011218773719424 0.9999999990996673 1.9450721366785644 0.6206182438734943 0.21759997010520404 6223.93932054986 2518463.1741204173 0.20146671909611572 0.052018483203809106 8.772672747315686e-09 8.056868071107164 0.9450721375788971 HSCSGSS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 5 HSCSGSSPPR 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HS(0.006)CS(0.039)GS(0.039)S(0.917)PPR;HSCSGS(0.199)S(0.8)PPR;HSCSGS(0.022)S(0.978)PPR;HS(0.004)CS(0.307)GS(0.307)S(0.382)PPR;HSCS(0.004)GS(0.023)S(0.973)PPR 98.337 0.0018488 3585180000.0 531688.0 669612.0 592230.0 1095535.0 574601.0 553639.0 552974.0 493143.0 670913.0 501285.0 True False 502194.2067462495 637442.8344118965 630406.0934015039 1199654.317015393 619818.8296675299 550183.53363904 608874.0084261689 491432.4020334417 549092.1115403986 496844.00489382877 1.0107683735734398 1.2829838503296673 1.26882097236177 2.4145492452339212 1.2475119425059376 1.1073566918787907 1.2254832551643247 0.9891080443618445 1.1051599820706999 1.0 18.922433431470637 -5.9897149676805235 24.999999993044646 1.1028211857291699 1.5090769805640782 0.23307649433745303 0.34865562403754546 341.08890150260964 829084.8753184642 0.11373382713048427 0.12882943268038433 1.0239648113386762e-06 5.9897149676805235 0.40625579483490837 HSDENDGGQPHKR ddPTM_KYSE-520_SHP099_60min_R1 1 HSDENDGGQPHKR 13 1 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 0 112.02 0.00015804 700470000.0 74736.0 121660.0 45281.0 23858.0 118320.0 140600.0 43959.0 66717.0 45927.0 76248.0 False True 70590.24509747756 115815.27098461709 48199.8857121616 26125.457146830755 127631.11085129023 139722.46324707827 48402.80471849662 66485.57429886484 37587.814525453956 75572.50204004627 0.9340731508409158 1.532505446534587 0.6377966113470774 0.3457005715251658 1.6888564941737383 1.8488532134749038 0.6404817018344545 0.8797588078218422 0.4973742235705783 1.0 16.20557376760691 HSDGNLCVK ddPTM_KYSE-520_SHP099_60min_R1 2 HSDGNLCVK 9 0 P49458;Q6P2S0;Q659G3;E9PE20;P49458-2 P49458 SRP9;DKFZp564M2223 Signal recognition particle 9 kDa protein 0 ; 92.051 0.0064751999999999995 1980030000.0 2531800.0 2566100.0 1844620.0 1743250.0 2410500.0 2562300.0 2132610.0 2410400.0 2401000.0 2345700.0 False True 2391356.0069818273 2442820.704205374 1963527.156696352 1908927.955872774 2600192.6361311264 2546307.735263076 2348195.031067882 2402038.884991592 1965038.924284515 2324918.9229269847 1.028576086417328 1.0507122119897219 0.844557260613779 0.8210729144350144 1.118401424879618 1.095224315202085 1.010011578430268 1.0331710328924142 0.8452075059076062 1.0 21.148748975209063 HSDPTLPGTDSLPCS(ph)PPVSNSYTQADPMAPR ddPTM_KYSE-520_SHP099_60min_R1 4 HSDPTLPGTDSLPCSPPVSNSYTQADPMAPR 31 0 A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4 A0A0A0MTL6 FAM65A Protein FAM65A 1 HSDPTLPGTDS(0.003)LPCS(0.997)PPVSNSYTQADPMAPR;HSDPTLPGTDSLPCS(1)PPVSNSYTQADPMAPR;HSDPTLPGTDSLPCS(1)PPVSNSYTQADPMAPR;HS(0.002)DPT(0.007)LPGT(0.058)DS(0.224)LPCS(0.706)PPVS(0.002)NS(0.001)YTQADPMAPR 200.68 6.6386e-16 2065120000.0 709435.0 1004334.0 705632.0 829992.0 691538.0 1043137.0 772619.0 1010321.0 1127954.0 1028097.0 True False 670081.2263263898 956084.2871039318 751118.1677711182 908874.1901338057 745958.1062870141 1036626.3950509774 850722.868554792 1006816.4322616953 923145.9870064193 1018988.8604273616 0.6575942606922703 0.9382676535864702 0.7371210784935383 0.8919373169129896 0.7320571747704494 1.017308859113748 0.8348696453835627 0.9880544050691965 0.9059431588086783 1.0 19.958706849391152 -1.0000000003401253 0.14014501682966557 1.039877336943598 1.1192710123753736e-07 0.3987284619726015 0.09240314555876694 76.91645851597094 0.7193995947793739 0.3707052062130077 16.027928064747506 0.09999999992168326 1.0000000003401253 -1.039877225016497 HSEEAEFTPPLKCS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 HSEEAEFTPPLKCSPK 16 1 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 HSEEAEFTPPLKCS(1)PK;HSEEAEFT(0.001)PPLKCS(0.999)PK;HSEEAEFTPPLKCS(1)PK;HSEEAEFT(0.011)PPLKCS(0.989)PK;HSEEAEFT(0.007)PPLKCS(0.993)PK;HSEEAEFT(0.008)PPLKCS(0.992)PK;HSEEAEFT(0.004)PPLKCS(0.996)PK 203.26 6.2253e-13 19698700000.0 23328500.0 20394100.0 19994300.0 20178420.0 20287600.0 18385650.0 16210790.0 17256000.0 20992400.0 16443860.0 True False 22034421.600788184 19414336.823831823 21283164.570011087 22096170.96993682 21884118.69934611 18270898.338539414 17849534.855264187 17196142.963580687 17180709.335339554 16298180.193529509 1.3519559447217304 1.191196599454671 1.3058614101260613 1.3557446725683617 1.3427338782298073 1.1210391664336297 1.0951857595948398 1.055095891651 1.0541489375703685 1.0 23.95820755061031 -6.409084359765514 3.3283225304501776 1.0589943150612244 1.3052122175670318 0.8597541858151099 0.04980642017681134 0.09967383823003753 2.0644999088323157 0.01998820115587689 0.01708956621355711 3.8986624954138765e-07 6.409084359765514 0.24621790250580733 HSEKS(ph)PPSTENK ddPTM_KYSE-520_SHP099_60min_R1 1 HSEKSPPSTENK 12 1 H3BQL3;Q6PH81 H3BQL3 C16orf87 UPF0547 protein C16orf87 1 HSEKS(1)PPSTENK 151.8 1.0369e-05 535000000.0 271850.0 244620.0 226390.0 334950.0 276490.0 278870.0 289580.0 317480.0 293110.0 327970.0 True False 256769.93858046053 232868.0880178943 240983.4616368075 366783.5472936108 298248.1899870959 277129.468888426 318853.57242845 316378.7359803888 239888.61270180502 325064.44095679873 0.7899047272740158 0.7163751511314724 0.7413405813551731 1.128341033593264 0.9175048156889398 0.8525370171917903 0.9808934237467882 0.973280051946487 0.7379724832273683 1.0 18.310366221602877 -5.186255900613528 24.999838454075007 0.9373257119621414 0.745922849642561 0.45253274245600283 0.0968287086951703 118.75039298858499 39485.80924869432 0.025917050089205713 0.04488964498603774 6.512445462467213e-06 5.186255900613528 -0.19140286231958048 HSEKS(ph)PPSTENKHEAK ddPTM_KYSE-520_SHP099_60min_R1 7 HSEKSPPSTENKHEAK 16 2 H3BQL3;Q6PH81 H3BQL3 C16orf87 UPF0547 protein C16orf87 1 HS(0.237)EKS(0.763)PPSTENKHEAK;HS(0.009)EKS(0.99)PPS(0.002)TENKHEAK;HS(0.052)EKS(0.889)PPS(0.052)T(0.008)ENKHEAK;HSEKS(0.926)PPS(0.037)T(0.037)ENKHEAK;HS(0.008)EKS(0.952)PPS(0.038)T(0.002)ENKHEAK;HS(0.062)EKS(0.931)PPS(0.004)T(0.002)ENKHEAK;HS(0.285)EKS(0.715)PPSTENKHEAK 172.69 1.8754e-08 20153490000.0 5877770.0 5921790.0 5701170.0 7737070.0 5939700.0 5449360.0 5166720.0 5565070.0 6886760.0 3828910.0 True False 5551718.381056002 5637298.319611998 6068676.540394525 8472398.80656508 6407120.597729947 5415348.522902544 5689022.479927901 5545766.0710671 5636297.985091892 3794988.836246908 1.4629076976538433 1.4854584724383697 1.5991289572267102 2.232522721975631 1.6883107893582983 1.4269735054762653 1.4990880672930031 1.4613392319097414 1.4851948789040352 1.0 21.855664210982066 -6.261651609175035 5.803679176787432 1.40986648041252 1.7077547878697745 0.29904013288106257 0.24104312567036834 0.24487745185204374 34.71038469883884 0.08770894557556994 0.08222112793475317 5.474549548929355e-07 6.261651609175035 0.2978883074572545 HSES(ph)PGATELNMCHSNCQNKPTLR ddPTM_KYSE-520_SHP099_60min_R1 3 HSESPGATELNMCHSNCQNKPTLR 24 1 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 HSES(1)PGATELNMCHSNCQNKPTLR;HS(0.019)ES(0.981)PGATELNMCHSNCQNKPTLR;HS(0.002)ES(0.998)PGATELNMCHSNCQNKPTLR 314.87 5.046399999999999e-61 4915400000.0 2184250.0 2439080.0 2153860.0 2485910.0 2192310.0 2028020.0 2091160.0 2427730.0 2577310.0 2181130.0 True False 2063085.2983055746 2321902.935666282 2292701.261897845 2722170.1389839053 2364832.324462404 2015362.3749241764 2302554.8605548684 2419308.771266442 2109335.4726979258 2161806.885093464 0.9543337624333539 1.0740565920465632 1.0605485983539746 1.2592105972806236 1.0939146973621385 0.9322582830228352 1.0651066366898536 1.119114194680643 0.9757279834950338 1.0 21.043806221739203 -6.0622942534296635 24.999065755172353 1.0270563481986306 1.0957618581800639 0.1409643214239129 0.08408583743552109 499.0943782310955 200288.29691966102 0.02904032772207569 0.029040350203647813 8.663746702730308e-07 6.0622942534296635 0.06870550998143332 HSETFTR ddPTM_KYSE-520_SHP099_60min_R1 1 HSETFTR 7 0 Q9UNS2-2;Q9UNS2 Q9UNS2-2 COPS3 COP9 signalosome complex subunit 3 0 105.25 0.006794199999999999 303550000.0 75588.0 87757.0 101160.0 118430.0 106770.0 85936.0 90730.0 75559.0 121600.0 61189.0 False True 71394.98295905773 83541.02199405759 107680.9354617229 129685.55159272201 115172.19156180052 85399.64154765946 99901.87383946865 75296.90346460317 99520.50528654591 60646.91306432164 1.1772236928751307 1.3774983387110673 1.7755386056915599 2.138370199571057 1.8990610691042062 1.4081449035515667 1.6472705500033202 1.2415620129707816 1.640982207635123 1.0 15.888146593400844 -8.368369381254357 0.6506026122776528 1.0006499720877196 1.6538364990090335 0.2841736670105337 0.2830627235566552 1.8703518457199104 1.5244168864921062 0.3479206445625389 0.12547702389366988 4.281841812288742e-09 8.368369381254357 0.653186526921314 HSGNITFDEIVNIAR ddPTM_KYSE-520_SHP099_60min_R1 1 HSGNITFDEIVNIAR 15 0 P30050;P30050-2 P30050 RPL12 60S ribosomal protein L12 0 121.42 0.00048018 88702000.0 136680.0 102500.0 97696.0 109740.0 129540.0 105760.0 92327.0 92633.0 121110.0 95537.0 False True 129098.0879351749 97575.74614436331 103993.6404791269 120169.65660546592 139734.06101822265 105099.91261031994 101660.31418468645 92311.67774370464 99119.47693465128 94690.61650666119 1.363367276482916 1.0304690131307694 1.0982465244780752 1.2690767157167295 1.475690687982719 1.109929541993493 1.073604945612905 0.9748767211501976 1.0467719040321015 1.0 16.53093384653093 -6.512113266033766 18.83502686539995 1.0317250417199957 1.2346981446330634 0.43880184533055755 0.11931561707282673 22.667253071159113 39661.56869549159 0.047133796939768165 0.03907021219097974 3.0752946589000925e-07 6.512113266033766 0.2029731029130677 HSGS(ph)RSDEDRYQNGAER ddPTM_KYSE-520_SHP099_60min_R1 1 HSGSRSDEDRYQNGAER 17 2 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 HS(0.298)GS(0.351)RS(0.351)DEDRYQNGAER 87.32600000000001 0.0012026 338900000.0 38130.0 40342.0 41211.0 39271.0 36265.0 33701.0 22987.0 32048.0 41156.0 20730.0 True False 36014.85288972949 38403.90976542348 43867.5269999314 43003.30403274332 39118.849180375575 33490.65955824881 25310.750291500754 31936.832968059425 33683.1078583313 20546.348327695945 1.7528590635827195 1.8691355345930742 2.1350522389810314 2.0929901190653903 1.9039319569815907 1.6300054405825617 1.2318855831613893 1.554380002650369 1.6393719857716684 1.0 14.32659438816904 -6.392746880618497 2.861781497771895 1.4033037524282768 1.968803084757315 0.6716908028491586 0.19447571709337677 0.1760935030231621 2.7810050653262057 0.0763397804660414 0.06532822609636554 4.048117589537243e-07 6.392746880618497 0.5654993323290383 HSGSRS(ph)DEDRYQNGAER ddPTM_KYSE-520_SHP099_60min_R1 1 HSGSRSDEDRYQNGAER 17 2 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 HSGS(0.002)RS(0.998)DEDRYQNGAER 205.65 1.9984e-13 406650000.0 42780.0 60365.0 56811.0 45544.0 52563.0 39342.0 41092.0 36208.0 60106.0 34385.0 True False 40406.908120184286 57464.97479028772 60473.12796081388 49872.488066697115 56699.4090574405 39096.45198482608 45245.980379272994 36082.40289901073 49192.265548956675 34080.37565112521 1.1856356436273672 1.6861602518278123 1.7744266841383036 1.4633784726211054 1.6636967161941625 1.147183716079 1.327625635422805 1.0587442834662366 1.4434191117060804 1.0 15.056653617314744 -6.264761629358497 24.969026671437867 1.2073304993848997 1.5691032659549513 0.4699782720672132 0.19024282751637853 256.92101471679246 1930932.3416169826 0.06344674059598607 0.05827276252640115 5.435485864318139e-07 6.264761629358497 0.36177276657005164 HSLDS(ph)DEEEDDDDGGSSK ddPTM_KYSE-520_SHP099_60min_R1 8 HSLDSDEEEDDDDGGSSK 18 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 HS(0.104)LDS(0.896)DEEEDDDDGGSSK;HSLDS(1)DEEEDDDDGGSSK;HS(0.001)LDS(0.999)DEEEDDDDGGSSK;HSLDS(1)DEEEDDDDGGSSK;HS(0.068)LDS(0.932)DEEEDDDDGGSSK;HSLDS(1)DEEEDDDDGGSSK;HSLDS(1)DEEEDDDDGGSSK;HSLDS(0.552)DEEEDDDDGGS(0.418)S(0.031)K 411.78 1.0642999999999998e-101 15204360000.0 13282940.0 11505750.0 10488770.0 12407260.0 12173040.0 12496450.0 13391750.0 12649670.0 13510520.0 12629720.0 True False 12546108.839315582 10952996.499517148 11164892.89682537 13586442.260021271 13130988.99287685 12418455.020227235 14745518.780885069 12605791.24722517 11057350.140493315 12517830.506573478 1.002259044227133 0.874991596488338 0.8919191621073922 1.0853671690862594 1.0489828078420924 0.9920612851968192 1.1779612108617197 1.007026835888655 0.8833279963877748 1.0 23.57748121141669 -5.253651771384065 24.80876809979815 1.0337589194906207 0.9182500947146243 0.27631530462229936 0.07715829714552584 671.3585231783401 2138723.4442718904 0.021466784898620084 0.036371075945129124 5.576326941255972e-06 5.253651771384065 -0.11550882477599644 HSLDS(ph)DEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR ddPTM_KYSE-520_SHP099_60min_R1 1 HSLDSDEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR 42 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 HS(0.041)LDS(0.959)DEEEDDDDGGSSKYDILASEDVEGQEAATLPSEGGVR 260.75 4.2527999999999994e-42 1537100000.0 979330.0 1059500.0 1077200.0 830430.0 934680.0 873520.0 808270.0 788990.0 1202000.0 854990.0 True False 925004.6126540446 1008600.0296580765 1146638.0355809387 909353.8175221157 1008233.9983982738 868068.0376642081 889977.8195550235 786253.17784165 983747.0999541807 847415.4537721536 1.091559763910976 1.1902072651241276 1.3531002184074374 1.073090906560946 1.1897753267423417 1.0243712618174738 1.0502260911025512 0.9278249226418421 1.160879348582995 1.0 19.692709912882723 -6.159636041612872 1.701774145408772 1.0248676840742401 1.195110081605577 0.38568799975873447 0.09012699328051214 0.3693373432805876 2.125880522643243 0.03628259174211139 0.03563193123769162 6.924109995244846e-07 6.159636041612872 0.17024239753133696 HSLDSDEEEDDDDGGS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 HSLDSDEEEDDDDGGSSK 18 0 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 HSLDS(0.034)DEEEDDDDGGS(0.957)S(0.009)K 313.87 1.2697e-47 833630000.0 1084100.0 883920.0 830650.0 946280.0 967620.0 1036500.0 1037800.0 1003800.0 1120800.0 1089800.0 True False 1023962.8119002277 841455.1564090304 884195.0280869908 1036214.1666905432 1043766.188995313 1030030.8190298469 1142710.951951951 1000318.052088682 917290.9730687563 1080145.2198515711 0.9479862458132585 0.7790203955396475 0.8185890302865878 0.9593285677206767 0.9663202408457103 0.9536040155520841 1.0579234448762151 0.9260958931301305 0.8492293038104695 1.0 20.042793857523517 -5.2688243007325495 23.872902066805672 0.9600603421600635 0.8415807387948032 0.3860641692980544 0.06360457612894452 293.8649932358143 949964.8102482527 0.018107881179001542 0.027518874306459527 5.3848759034822856e-06 5.2688243007325495 -0.11847960336526031 HSLGLTVS(ph)PCR ddPTM_KYSE-520_SHP099_60min_R1 2 HSLGLTVSPCR 11 0 G5E9D9;A0A0C4DFZ6;Q9H972-2;Q9H972 G5E9D9 C14orf93 Uncharacterized protein C14orf93 1 HSLGLTVS(1)PCR;HSLGLTVS(1)PCR 130.15 0.00013549 0.0 445260.0 439480.0 367020.0 348720.0 392700.0 363390.0 400550.0 384940.0 516650.0 359280.0 True False 420560.5401961961 418366.72112707136 390678.6964527631 381862.24395350926 423603.2558426441 361121.94821732346 441041.502991283 383604.73298567097 422839.38368662784 356097.05871561007 1.181027840311561 1.174867106838958 1.0971129552765304 1.072354389364603 1.1895724647951853 1.0141110109694178 1.2385429539408586 1.0772476873841 1.1874273413314549 1.0 18.441910993839198 -11.517404321129145 1.6862287871405899 4.8122129292516415e-05 1.134135382073654 0.2786232243478006 0.06595601071548532 955381.4190174945 60119.49394750671 3638061.8974584015 0.01584613786737652 3.038055328370823e-12 11.517404321129145 1.1340872599443614 HSLS(ph)LDDIR ddPTM_KYSE-520_SHP099_60min_R1 9 HSLSLDDIR 9 0 Q96NE9-3;Q96NE9-2;Q96NE9 Q96NE9-3 FRMD6 FERM domain-containing protein 6 1 HS(0.001)LS(0.999)LDDIR;HS(0.04)LS(0.96)LDDIR;HS(0.004)LS(0.996)LDDIR;HS(0.108)LS(0.892)LDDIR;HSLS(1)LDDIR;HSLS(1)LDDIR;HSLS(1)LDDIR;HSLS(1)LDDIR;HSLS(1)LDDIR 155.26 0.00020209999999999998 7307550000.0 10476210.0 9938300.0 9246260.0 8910830.0 10286930.0 8993590.0 8605290.0 9235120.0 11403780.0 8948560.0 True False 9895073.747493133 9460849.150307568 9842288.714139087 9757712.604061259 11096452.866374768 8937457.668807175 9475196.692737147 9203085.524213213 9333141.01789973 8869282.720274331 1.1156565936131386 1.0666983395039344 1.1097051502981812 1.1001693047574255 1.2511105143834618 1.0076866360767824 1.0683160061047277 1.0376358285632097 1.0522994149870837 1.0 23.08038600443157 HSLS(ph)PVPWEEDSFLQVK ddPTM_KYSE-520_SHP099_60min_R1 1 HSLSPVPWEEDSFLQVK 17 0 P10073 P10073 ZSCAN22 Zinc finger and SCAN domain-containing protein 22 1 HS(0.108)LS(0.892)PVPWEEDSFLQVK 149.34 3.9863e-06 214220000.0 181280.0 207260.0 187730.0 170670.0 190350.0 179910.0 171740.0 180610.0 259630.0 174630.0 True False 171224.03702727932 197302.91849639735 199831.37617862018 186890.42548619348 205329.46205665212 178787.1149557741 189101.15522087892 179983.50606469077 212487.73673968727 173082.91406008427 0.9892601933420208 1.1399329596906678 1.1545413206369428 1.0797739713425212 1.186306939490132 1.0329564644012734 1.0925466343560293 1.0398687070995987 1.2276644283093359 1.0 17.4011037900287 -8.888579922163913 13.853912272464996 1.000000042513578 1.1045435715221963 0.1678950883481749 0.06996531019158052 0.0 0.0 0.06405200106352268 0.01553489211276934 1.2924688290049513e-09 8.888579922163913 0.1045435290086183 HSLS(ph)STK ddPTM_KYSE-520_SHP099_60min_R1 3 HSLSSTK 7 0 P42858;A0A3B3IU44 P42858 HTT Huntingtin 1 HS(0.001)LS(0.963)S(0.034)T(0.002)K;HS(0.085)LS(0.879)S(0.035)T(0.001)K;HS(0.009)LS(0.694)S(0.295)T(0.003)K 81.525 0.013165000000000001 1647770000.0 4177800.0 3802900.0 2994180.0 3742400.0 3519200.0 4216000.0 3827300.0 3495000.0 4420000.0 5209200.0 True False 3946049.105762181 3620202.975730729 3187189.633657386 4098076.5708064097 3796141.01849104 4189686.380154204 4214200.834848427 3482876.6607391294 3617439.419132675 5163050.540696276 0.7642863602938944 0.7011751961743371 0.6173074635886809 0.7937316395616288 0.7352515704754464 0.8114749888908105 0.8162230451999625 0.6745772936534992 0.7006399396285662 1.0 22.299792289921026 -5.2947561314635 24.800766782167035 0.7763842716895858 0.6949481790471248 0.1804430441895164 0.0904388311545649 1071.5998100432275 797689.3602313714 0.024822252868761187 0.03682000541628916 5.07275477727471e-06 5.2947561314635 -0.08143609264246099 HSLSGS(ph)SPGMK ddPTM_KYSE-520_SHP099_60min_R1 3 HSLSGSSPGMK 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HSLS(0.058)GS(0.471)S(0.471)PGMK;HSLS(0.01)GS(0.495)S(0.495)PGMK;HSLS(0.005)GS(0.837)S(0.158)PGMK 202.27 1.552e-06 2511200000.0 7350690.0 8705000.0 7706860.0 14116700.0 7678760.0 7487020.0 7271880.0 6763650.0 9027700.0 6840070.0 True False 6942932.572462773 8286798.7335286075 8203656.527011983 15458346.923659394 8283034.725832094 7440290.731010936 8006992.597109597 6740188.476797776 7388497.2497973 6779472.301293934 1.0241110611422723 1.222336837624808 1.2100730207934074 2.2801696410366636 1.2217816310350866 1.0974734316107284 1.1810642836583871 0.994205474592962 1.0898336804749726 1.0 22.692741550954995 -5.991000196974049 24.996683512680203 1.0879029602396393 1.4465269456270862 0.22335384775335143 0.3169932947552857 330.772929083229 918705.1285696609 0.10373956653711622 0.11746969855464773 1.020939020661183e-06 5.991000196974049 0.3586239853874469 HSLSGSS(ph)PGMK ddPTM_KYSE-520_SHP099_60min_R1 2 HSLSGSSPGMK 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 HSLS(0.001)GS(0.058)S(0.941)PGMK;HSLS(0.023)GS(0.201)S(0.777)PGMK 221.56 6.813900000000001e-10 2511280000.0 5724600.0 7093700.0 5775000.0 11439300.0 6086200.0 5615500.0 5662900.0 5298200.0 7061000.0 5477100.0 True False 5407045.026292826 6752908.004139229 6147265.740326698 12526487.632649055 6565149.31425898 5580451.581536037 6235361.196578043 5279821.78080918 5778900.393324848 5428577.155119323 0.9960335594003317 1.2439554253679566 1.132389862881405 2.307508445529999 1.2093683347703426 1.027976838511633 1.148617956124635 0.9725977231124251 1.0645331600150805 1.0 22.372142682594504 -5.993474775487219 24.992376200880848 1.0555408954025667 1.4333051441862694 0.22224062149291657 0.33185983662784757 270.16235426944587 1034743.5147613593 0.10754545945078013 0.12165791942122994 1.0151383257055446e-06 5.993474775487219 0.37776424878370274 HSLSS(ph)VTYVPR ddPTM_KYSE-520_SHP099_60min_R1 1 HSLSSVTYVPR 11 0 Q9Y271 Q9Y271 CYSLTR1 Cysteinyl leukotriene receptor 1 1 HS(0.005)LS(0.198)S(0.785)VT(0.006)Y(0.005)VPR 58.699 0.036128 907060000.0 1258000.0 1239500.0 1160400.0 1361700.0 1253500.0 1244900.0 1270800.0 1255500.0 1458000.0 1141000.0 True False 1188216.2322391737 1179952.5594725686 1235201.2407056463 1491115.5585899674 1352143.3185606163 1237130.1173277923 1399264.8658128132 1251144.9635359023 1193263.953189015 1130891.6276845683 1.0506897417500332 1.0433825227696216 1.0922366126581426 1.3185309025966845 1.195643583752625 1.093942237295311 1.2373111901780747 1.1063349775588536 1.0551532295204538 1.0 20.109029253123033 -9.964138723947944 11.49343044788707 1.0000162963304575 1.1372663829720209 0.1739483420163085 0.08613208751430679 0.0 0.0 0.08920282595695747 0.021634863148477915 1.086078648949403e-10 9.964138723947944 0.13725008664156335 HSLYTAELITVPFDSES(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 2 HSLYTAELITVPFDSESPIR 20 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 HSLYTAELITVPFDS(0.038)ES(0.961)PIR;HSLYTAELITVPFDS(0.056)ES(0.944)PIR 79.676 0.004363199999999999 256780000.0 305200.0 332070.0 336390.0 286200.0 243780.0 298220.0 266330.0 254070.0 307840.0 262810.0 True False 288269.9475988834 316116.8587527682 358074.2376430298 313400.3619508327 262964.0990815374 296358.6983609076 293253.2355303173 253188.69047038385 251944.01601488775 260481.70786308634 1.1066801963322623 1.213585634653949 1.3746617395154663 1.2031568915985507 1.0095300020827407 1.1377332435054475 1.1258112438530856 0.9720018059904005 0.9672234495149803 1.0 17.990822538296452 -6.471685570998393 0.731227667048663 0.9770601694968275 1.2308156149120042 0.5270689406785414 0.08481217152942871 0.5872079095215335 0.6613810001367902 0.07141495937057217 0.057806986723064675 3.375315929326345e-07 6.471685570998393 0.2537554454151767 HSMDQTGSKS(ph)DKETEK ddPTM_KYSE-520_SHP099_60min_R1 2 HSMDQTGSKSDKETEK 16 2 H0YDX5;Q14008-2;Q14008;Q14008-3 H0YDX5 CKAP5 Cytoskeleton-associated protein 5 1 HSMDQTGS(0.007)KS(0.993)DKETEK;HSMDQT(0.059)GS(0.176)KS(0.765)DKETEK 148.89 5.5426e-06 1634990000.0 799230.0 739750.0 650140.0 824730.0 818300.0 704680.0 625300.0 681880.0 935760.0 576050.0 True False 754895.1186744939 704211.2996126126 692049.064660779 903112.0912358837 882695.554509894 700281.8307322256 688511.4263399057 679514.7174319885 765849.5725899534 570946.6451601181 1.322181547214081 1.233409996506979 1.2121081199569856 1.5817801871532355 1.546021089698054 1.2265276215710774 1.2059120272907766 1.1901544972585365 1.3413680228827267 1.0 19.122996406785997 -6.489587477184958 23.692950401127423 1.2024926394987434 1.374317548051834 0.32300585377422897 0.13485600290530092 490.0588948792842 348768.57896883576 0.05103430690317504 0.044967786731148235 3.239011745031119e-07 6.489587477184958 0.17182490855309052 HSPAPPPDPGFPAPS(ph)PPPADSPSEGFSLK ddPTM_KYSE-520_SHP099_60min_R1 5 HSPAPPPDPGFPAPSPPPADSPSEGFSLK 29 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK;HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK;HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK;HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK;HSPAPPPDPGFPAPS(1)PPPADSPSEGFSLK 219.93 1.2486e-22 6701260000.0 2775460.0 3261390.0 2263050.0 2479920.0 2386590.0 3947250.0 3377290.0 4776480.0 5717170.0 5007240.0 True False 2621499.701057659 3104707.928953803 2408929.8240080248 2715610.8511848655 2574401.055160416 3922613.7485919567 3718699.432374059 4759911.505718813 4679076.046127322 4962879.749173767 0.5282214829996824 0.6255859673953782 0.4853895209548588 0.5471844953803218 0.5187312982122947 0.7903906495507983 0.7493027476624148 0.9591027279093868 0.9428147129509449 1.0 22.24274606780921 -6.779512010078624 1.0646101066136695 0.984396020495758 0.5362678679141863 0.9080091730859845 0.05769522555885767 0.1426718164489209 0.31904211888505707 0.040762515208412745 0.02276434426631262 1.6614527309387065e-07 6.779512010078624 -0.4481281525815717 HSPEEDFRQS(ph)PQEHFR ddPTM_KYSE-520_SHP099_60min_R1 3 HSPEEDFRQSPQEHFR 16 1 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 HSPEEDFRQS(1)PQEHFR;HSPEEDFRQS(1)PQEHFR;HSPEEDFRQS(1)PQEHFR 236.95 3.3131999999999997e-23 5900800000.0 2615090.0 2238730.0 2193040.0 2474860.0 2761340.0 2595350.0 2377450.0 2145890.0 2828590.0 2228660.0 True False 2470025.7446473315 2131178.050397762 2334406.8673880612 2710069.9503062116 2978641.7481245915 2579151.4579538 2617785.8476760085 2138446.4084444917 2314989.358951241 2208915.8062712424 1.1182072841503432 0.9648072798190052 1.056811156296923 1.2268778839882275 1.3484632323550094 1.1676096710573742 1.1850998758051166 0.9680977438675191 1.0480206408858361 1.0 21.074907000154173 -7.2601414988722555 24.984152231592287 1.0060443902275098 1.152623016204957 0.32605684576024463 0.09696603638477018 160.12235981364387 3082413.3061123113 0.05609410143380966 0.030076399322635602 5.4936185535519606e-08 7.2601414988722555 0.1465786259774473 HSPQQPSNGS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 4 HSPQQPSNGSLR 12 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 HSPQQPS(0.01)NGS(0.99)LR;HSPQQPS(0.006)NGS(0.994)LR;HS(0.001)PQQPS(0.014)NGS(0.984)LR;HS(0.042)PQQPS(0.101)NGS(0.857)LR 179.08 7.759399999999999e-07 10659850000.0 427012.0 435522.0 439370.0 547974.0 394140.0 411545.0 391113.0 404434.0 492982.0 374827.0 True False 403324.79313268233 414598.8693881505 467692.49321685557 600053.2842056088 425156.575650165 408976.3950001338 430650.5189350385 403031.11284960544 403468.89586490137 371506.3243909929 1.0856471792071083 1.1159941087619407 1.2589085636255044 1.6151899572349702 1.14441275353016 1.1008598458466765 1.159201043591923 1.0848566670036934 1.0860350669031125 1.0 18.50302724533489 -5.981966090712609 24.995648243898597 1.099010346286063 1.2726077687400998 0.2789138025640887 0.1381413763154645 364.4476631048297 505135.0213914515 0.04615391610448854 0.0523249517566768 1.0423988156936065e-06 5.981966090712609 0.17359742245403686 HSPS(ph)PRPR ddPTM_KYSE-520_SHP099_60min_R1 1 HSPSPRPR 8 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 HS(0.032)PS(0.968)PRPR 75.197 0.011043 79054000.0 40078.0 41773.0 45210.0 46050.0 41306.0 42299.0 39546.0 43699.0 52662.0 38247.0 True False 37854.79344648776 39766.16237744867 48124.30893855763 50426.57815456264 44556.54720100906 42034.99625098261 43543.69561176701 43547.41836842328 43099.90830098754 37908.16133571571 0.9985921794318822 1.0490132197464934 1.2694973125277018 1.330230124009009 1.1753813857236457 1.108864022148675 1.1486628229246694 1.1487610275467108 1.13695591614939 1.0 15.210220862537188 -8.842829512037433 0.7760164527066203 0.9967217709664546 1.1620788235336699 0.2014033342983904 0.09073805843658153 6.771625556021804 4.845702770947642 0.16028964901993845 0.03508322940507058 1.4360530640741968e-09 8.842829512037433 0.16535705256721522 HSQAQSKPTT(ph)PEKTDLTNGEHAR ddPTM_KYSE-520_SHP099_60min_R1 3 HSQAQSKPTTPEKTDLTNGEHAR 23 2 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 HSQAQS(0.005)KPT(0.025)T(0.969)PEKT(0.001)DLTNGEHAR;HSQAQSKPT(0.185)T(0.815)PEKTDLTNGEHAR;HSQAQS(0.01)KPT(0.226)T(0.76)PEKT(0.004)DLTNGEHAR 136.16 5.3037e-07 2436290000.0 1095440.0 1227550.0 842920.0 1826360.0 1107270.0 1019930.0 1067940.0 978580.0 1201620.0 816790.0 True False 1034673.7594944978 1168576.6554098863 897255.9719196858 1999936.7052848411 1194405.8494955036 1013564.2385461759 1175897.7972900034 975185.5343822896 983436.098375161 809553.8760530035 1.2780789396489223 1.443482256063433 1.108333859500835 2.470418293882519 1.4753877225798162 1.2520034410653793 1.452525683680396 1.2045962143209377 1.2147877089662318 1.0 19.62676756994682 -7.329553579449948 0.9553557217726286 1.0482524608734143 1.5436420961944695 0.19995202817746416 0.34750932807048984 0.9690884087626982 1.5903705949169609 0.3265460862490425 0.13040356599732525 4.6821618339780244e-08 7.329553579449948 0.4953896353210552 HSQAVEELAEQLEQTKR ddPTM_KYSE-520_SHP099_60min_R1 5 HSQAVEELAEQLEQTKR 17 1 P35579 P35579 MYH9 Myosin-9 0 ;;;; 276.46 8.902e-30 2059510000.0 3143180.0 2880530.0 2177230.0 2239990.0 3274930.0 2557210.0 2152680.0 2526720.0 2517120.0 2213150.0 False True 2968821.5396260126 2742145.0150363185 2317577.7294911724 2452877.976122447 3532648.35919722 2541249.503841115 2370293.902532204 2517955.398060883 2060074.459431505 2193543.2128046453 1.3534365415259375 1.2500984703785414 1.0565452806958553 1.1182264209813393 1.6104758450053083 1.1585135360027377 1.0805777103891958 1.1478941392002244 0.9391538071399613 1.0 21.06483169705578 -6.5199401287690595 21.052362053780797 1.0635610827170023 1.268010276771483 0.35675908856245775 0.1479772294861036 21.203543243335165 151924.65617757296 0.05841502931645809 0.04638590297602111 3.020368075428326e-07 6.5199401287690595 0.2044491940544806 HSQFIGYPITLFVEK ddPTM_KYSE-520_SHP099_60min_R1 4 HSQFIGYPITLFVEK 15 0 P07900;P07900-2;G3V2J8;Q58FG0 P07900 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 ;;; 133.48 7.3754e-05 272329000.0 620562.0 626890.0 482211.0 471316.0 765460.0 648070.0 446218.0 445309.0 442885.0 303499.0 False True 586138.1888003232 596773.2634189269 513295.09262487956 516109.7309336775 825697.3471283682 644025.1547406391 491326.07010801294 443764.3270149018 362468.2482223019 300810.2349786493 1.9485314016723057 1.983886164848361 1.7063750927933414 1.715731949646958 2.7449110805254815 2.1409682246561537 1.6333422635798478 1.4752301464955107 1.2049731228328349 1.0 18.198494129556533 -7.336925850276922 1.5501725220047338 1.0898389611496702 2.029682383424147 0.6321455544318022 0.2837190139751828 0.29935865126613975 1.277972076930644 0.2580389326069528 0.09438917910302512 4.603351626781445e-08 7.336925850276922 0.9398434222744767 HSQFLGYPITLYLEK ddPTM_KYSE-520_SHP099_60min_R1 3 HSQFLGYPITLYLEK 15 0 Q58FF8 Q58FF8 HSP90AB2P Putative heat shock protein HSP 90-beta 2 0 ;; 134.9 9.8816e-05 226591000.0 496540.0 553360.0 437929.0 439892.0 706270.0 567890.0 449795.0 373935.0 374468.0 291215.0 False True 468995.93637205014 526775.754989706 466158.6040511742 481699.2034216473 761849.4308733991 564345.5878619008 495264.6681761689 372637.9067620854 306474.05077008496 288635.0616618419 1.6248751405035986 1.8250580922385105 1.6150449684360064 1.6688866579417676 2.6394902493376367 1.9552218798805356 1.7158853305091863 1.2910347918807568 1.0618046505006478 1.0 18.13888703488014 -7.325912661775737 2.1395030779799677 1.0374575660781904 1.8945001925667972 0.6149849032372217 0.27789088393022865 0.2462791195286411 2.1041569373501434 0.22326157449059625 0.08711003067518894 4.7215798443101986e-08 7.325912661775737 0.8570426264886069 HSQPAT(ph)PTPLQSR ddPTM_KYSE-520_SHP099_60min_R1 1 HSQPATPTPLQSR 13 0 Q9NR12-2;Q9NR12 Q9NR12-2 PDLIM7 PDZ and LIM domain protein 7 1 HSQPAT(0.997)PT(0.003)PLQSR 207.21 3.5998000000000003e-09 487480000.0 379070.0 401500.0 334270.0 341850.0 272560.0 359260.0 312490.0 377330.0 432290.0 349310.0 True False 358042.2314426893 382211.3373362133 355817.57905090984 374339.32121904974 294008.92134573753 357017.7250792696 344079.5388085032 376021.1302994839 353797.03314408683 346215.3851590676 1.0341603718107095 1.1039698226022148 1.0277347405789912 1.0812324849372617 0.8492081344410967 1.0312012128381844 0.9938308739526897 1.0860901809049364 1.0218986454964614 1.0 18.401310311213884 HSQPS(ph)PEPHS(ph)PTEPPAWGSSIVK ddPTM_KYSE-520_SHP099_60min_R1 1 HSQPSPEPHSPTEPPAWGSSIVK 23 0 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7 Q5VZ89-5 DENND4C DENN domain-containing protein 4C 2 HSQPS(0.999)PEPHS(0.918)PT(0.082)EPPAWGSSIVK 135.39 8.1342e-07 500480000.0 244240.0 271790.0 241800.0 283840.0 256940.0 274690.0 243830.0 240180.0 303300.0 248350.0 True False 230691.52031963094 258732.8004348927 257386.81489367914 310816.06826039206 277159.7162113799 272975.55781891814 268478.7159514779 239346.8716384337 248228.36557080116 246149.8122133765 0.9371996600170247 1.051119227385835 1.0456510715131555 1.2627109704676889 1.1259797995341239 1.1089813774965938 1.0907126580244775 0.972362600995829 1.0084442613981068 1.0 17.909177113384228 -9.868699337217985 6.5957450270495865 0.9999999975402212 1.0725588995857729 0.048226042587494855 0.08621111182898653 3.4025090610614857e-09 6.109090818514219e-10 0.09013616427111007 0.021861230288355838 1.353008929333531e-10 9.868699337217985 0.07255890204555171 HSQQLFPDGS(ph)PGDQWVK ddPTM_KYSE-520_SHP099_60min_R1 2 HSQQLFPDGSPGDQWVK 17 0 H0Y9T5;Q8IU60;Q8IU60-2 H0Y9T5 DCP2 m7GpppN-mRNA hydrolase 1 HSQQLFPDGS(1)PGDQWVK;HSQQLFPDGS(1)PGDQWVK 188.71 1.2372999999999999e-09 606970000.0 768120.0 703250.0 660660.0 666020.0 664200.0 614260.0 574590.0 614800.0 652390.0 613100.0 True False 725510.8523907429 669464.8144002302 703247.2006933744 729318.3405537861 716468.7612189562 610426.1754918218 632675.1646579982 612667.402295399 533932.4214135668 607668.4109845828 1.1939255674245501 1.1016942830967977 1.15728773782058 1.2001913006669187 1.1790455917530551 1.0045382719545528 1.0411519723937894 1.008226511729837 0.8786575240079629 1.0 19.212924771255757 -6.29670321163846 5.386420337311811 0.9889428433933305 1.1644433803041825 0.7870112788401077 0.04680337354536729 0.09730299447107951 7.842533274485129 0.017239216339278392 0.01549004359063998 5.050062910992101e-07 6.29670321163846 0.175500536910852 HSS(ph)ADNLANEMTYITETEDVFYTYK ddPTM_KYSE-520_SHP099_60min_R1 1 HSSADNLANEMTYITETEDVFYTYK 25 0 J3KN34;P26045-2;P26045;P26045-3 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 HS(0.174)S(0.825)ADNLANEMTYITETEDVFYTYK 149.07 5.5875e-07 197420000.0 52168.0 50244.0 50739.0 55145.0 36411.0 37954.0 37344.0 40316.0 55990.0 30745.0 True False 49274.13704567028 47830.202822218474 54009.71712527043 60385.9642200512 39276.33854974917 37717.115007678534 41119.09596231803 40176.153205825154 45823.627393040406 30472.623219248067 1.616996892297287 1.5696122541890805 1.772401303841644 1.9816464039075028 1.288905725875947 1.2377377141543389 1.3493782818259343 1.318434350622228 1.5037637903157566 1.0 14.895226078540114 -5.7841484528731995 24.9976609317173 1.300010333662525 1.7259988459465023 0.6686047223601783 0.15561062228560682 148.82825031805962 163826.13123883083 0.04882024471775936 0.055394810241583846 1.6438097312945753e-06 5.7841484528731995 0.42598851228397727 HSS(ph)IS(ph)PSTLTLK ddPTM_KYSE-520_SHP099_60min_R1 4 HSSISPSTLTLK 12 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YCQ1 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 2 HS(0.429)S(0.571)IS(0.66)PS(0.29)T(0.05)LTLK;HS(0.049)S(0.951)IS(0.735)PS(0.264)T(0.002)LTLK;HS(0.014)S(0.986)IS(0.595)PS(0.17)T(0.231)LT(0.003)LK;HS(0.255)S(0.744)IS(0.834)PS(0.081)T(0.071)LT(0.014)LK 164.92 1.1845e-05 2850950000.0 6202080.0 6019120.0 5361580.0 6334900.0 5793260.0 5378470.0 5357710.0 5591280.0 6696700.0 5514500.0 True False 5858038.258860036 5729952.440316691 5707196.025631315 6936966.991342864 6249156.602859576 5344900.973687856 5899319.613010678 5571885.154694567 5480748.090069189 5465645.820216076 1.0717925111782027 1.0483578023155122 1.0441942660319854 1.2691943860842085 1.1433519127319751 0.9779084026847085 1.079345388826797 1.0194376543912775 1.0027631263257588 1.0 22.381960544009058 -6.255503038559441 24.922285108301814 1.0210716720129323 1.1162455063424193 0.36973400676680257 0.06476503188817591 608.5292946872519 2554766.7009234093 0.023606952610021152 0.023021183780577176 5.552607322011207e-07 6.255503038559441 0.095173834329487 HSS(ph)IS(ph)PVRLPLNSSLGAELSR ddPTM_KYSE-520_SHP099_60min_R1 5 HSSISPVRLPLNSSLGAELSR 21 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 HS(0.141)S(0.866)IS(0.99)PVRLPLNS(0.001)S(0.001)LGAELSR;HS(0.568)S(0.659)IS(0.773)PVRLPLNSSLGAELSR;HS(0.096)S(0.904)IS(1)PVRLPLNSSLGAELSR;HS(0.025)S(0.975)IS(1)PVRLPLNSSLGAELSR;HS(0.065)S(0.935)IS(1)PVRLPLNSSLGAELSR 222.71 4.3872e-19 30914770000.0 10282740.0 10446130.0 10378230.0 11192610.0 10480810.0 9959480.0 8853340.0 10393800.0 13279450.0 9895810.0 True False 9712335.914066017 9944282.234839201 11047227.31155512 12256352.2892191 11305590.119348463 9897319.191038486 9748322.007471835 10357746.33373116 10868236.627692638 9808140.822223691 0.9902321031177901 1.0138804504424563 1.126332452988833 1.2496101464457108 1.1526741228808408 1.0090922806300588 0.9939011056390712 1.0560356464562732 1.1080832570293992 1.0 23.22554826226654 -6.269320295153652 24.875737765244367 1.0344546004940518 1.1104450491386189 0.19588521244664137 0.07385145847514099 1082.1556182814359 3415764.66343491 0.029314901635039026 0.026272571145491135 5.378729512174895e-07 6.269320295153652 0.07599044864456705 HSS(ph)ISPST(ph)LTLK ddPTM_KYSE-520_SHP099_60min_R1 2 HSSISPSTLTLK 12 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YCQ1 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 2 HS(0.014)S(0.986)IS(0.091)PS(0.363)T(0.476)LT(0.07)LK;HS(0.011)S(0.989)IS(0.055)PS(0.395)T(0.542)LT(0.008)LK 135.58 0.00010162 2721400000.0 5097500.0 4945000.0 4325500.0 5026200.0 4878000.0 4476300.0 4392800.0 4367300.0 5571300.0 4246900.0 True False 4814731.513385676 4707434.77740367 4604328.651044702 5503888.5368178645 5261870.847976612 4448361.751300824 4836867.093596581 4352150.855635484 4559692.361043865 4209275.770038207 1.1438384597315117 1.1183479141260781 1.093852933993657 1.3075618794080357 1.250065601648345 1.056799790349789 1.1490972219082423 1.0339429140314986 1.0832486656017972 1.0 22.00514060003751 -7.025310121877211 1.2333723430571633 1.0341345809783977 1.173789126288687 0.3946563808785847 0.0701156679244751 0.5598128106454536 1.5962778754030247 0.05765054035134283 0.02623487007260556 9.4338698003366e-08 7.025310121877211 0.1396545453102893 HSS(ph)NPPLESHVGWVMDSR ddPTM_KYSE-520_SHP099_60min_R1 7 HSSNPPLESHVGWVMDSR 18 0 Q6PKG0;Q6PKG0-3;H0YC33;H0YBR8 Q6PKG0 LARP1 La-related protein 1 1 HS(0.224)S(0.776)NPPLESHVGWVMDSR;HS(0.205)S(0.795)NPPLESHVGWVMDSR;HS(0.156)S(0.844)NPPLESHVGWVMDSR;HS(0.037)S(0.963)NPPLESHVGWVMDSR;HS(0.007)S(0.993)NPPLESHVGWVMDSR;HS(0.19)S(0.81)NPPLESHVGWVMDSR;HS(0.023)S(0.977)NPPLESHVGWVMDSR 254.33 1.3447e-24 20294230000.0 3439678.0 3491053.0 3271962.0 4145852.0 3147669.0 2919313.0 3063643.0 3292238.0 4181983.0 3272377.0 True False 3248872.204511905 3323337.5737026115 3482877.9058443033 4539872.527584149 3395372.6425132663 2901092.4847028265 3373345.932714329 3280817.994792124 3422640.306412382 3243386.285650785 1.0016914170493323 1.0246505599427187 1.0738399928658096 1.399732294506272 1.046860393267028 0.8944640660095542 1.0400691239395394 1.0115409346419642 1.055267552173678 1.0 21.62906942759363 -5.990568348364241 24.999835594035787 0.9998310513942343 1.1278015994498196 0.22476619696966083 0.1092399801242195 329.53745212325117 873476.0672279487 0.03602840488566234 0.04080269171621105 1.0219547148315295e-06 5.990568348364241 0.12797054805558528 HSS(ph)PHQS(ph)EDEEDPR ddPTM_KYSE-520_SHP099_60min_R1 7 HSSPHQSEDEEDPR 14 0 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 2 HS(0.235)S(0.765)PHQS(0.999)EDEEDPR;HS(0.038)S(0.962)PHQS(1)EDEEDPR;HS(0.198)S(0.803)PHQS(1)EDEEDPR;HS(0.011)S(0.989)PHQS(1)EDEEDPR;HS(0.175)S(0.825)PHQS(1)EDEEDPR;HS(0.122)S(0.878)PHQS(1)EDEEDPR;HS(0.456)S(0.545)PHQS(1)EDEEDPR 170.79 7.4755e-06 3698972000.0 1455942.0 1575908.0 1447656.0 1815233.0 1535581.0 1495896.0 1485301.0 1822600.0 1988210.0 1514448.0 True False 1375177.9949115787 1500199.0141938685 1540974.2220914958 1987752.1985502958 1656422.4884392729 1486559.5581895516 1635449.7202208363 1816277.8259980371 1627201.1826954233 1501031.168942715 0.9161555225267015 0.9994456112797226 1.0266104088810597 1.3242577767058719 1.1035230464974364 0.9903588872419239 1.0895508061786632 1.2100200605943268 1.0840555588473082 1.0 20.517522504185646 -5.010052588512658 23.393321799336942 1.1211392042290949 0.9716072745553554 0.3141575872086657 0.09352453243986017 246.72332605310498 574160.2437193091 0.025624565566731122 0.04868234865922497 9.771188949287764e-06 5.010052588512658 -0.1495319296737394 HSS(ph)PKIR ddPTM_KYSE-520_SHP099_60min_R1 1 HSSPKIR 7 1 Q92973-3;Q92973-2;Q92973 Q92973-3 TNPO1 Transportin-1 1 HS(0.021)S(0.979)PKIR 52.591 0.045521 716470000.0 587320.0 603700.0 462220.0 484810.0 705520.0 635330.0 541290.0 607610.0 652930.0 771080.0 True False 554740.1888066069 574697.3458278253 492015.4407781481 530886.1966365584 761040.410140316 631364.6698063022 596008.875681318 605502.3427272396 534374.3710258593 764248.8310911614 0.7258633134113832 0.7519767416684136 0.6437895888904008 0.6946509762776897 0.9958018634503314 0.8261244821334788 0.7798623320501026 0.7922842902654226 0.699215163028647 1.0 19.543682914967082 HSS(ph)PTEERDEPAYPR ddPTM_KYSE-520_SHP099_60min_R1 2 HSSPTEERDEPAYPR 15 1 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 1 HS(0.016)S(0.976)PT(0.007)EERDEPAYPR;HS(0.025)S(0.961)PT(0.015)EERDEPAYPR 228.9 4.9523000000000004e-15 1444370000.0 445260.0 483710.0 436580.0 354670.0 416130.0 385910.0 430700.0 401380.0 557100.0 354110.0 True False 420560.5401961961 460471.8455364872 464722.6453526986 388377.7301645763 448877.0635441803 383501.3925439541 474239.3592269267 399987.70646279666 455944.6833481483 350972.8608934113 1.1982708267689057 1.3119870418594277 1.3240985190984111 1.1065748194203673 1.278950920596969 1.0926810453883542 1.3512137605732164 1.1396542326509709 1.29908814655221 1.0 18.420999952350613 -10.611193072788746 2.6155832729131556 0.977622728114891 1.2327270103967352 0.3786530613739466 0.08977053426531299 17398859.15751349 15981339.813939817 2665385.992763709 0.020872709374674368 2.447974712289082e-11 10.611193072788746 0.2551042822818441 HSST(ph)GDLLSLELQQAK ddPTM_KYSE-520_SHP099_60min_R1 1 HSSTGDLLSLELQQAK 16 0 Q9HBD1;H0Y5D9;Q9HBD1-6;Q9HBD1-4 Q9HBD1 RC3H2 Roquin-2 1 HS(0.299)S(0.299)T(0.401)GDLLSLELQQAK 148.44 1.236e-05 180260000.0 174660.0 160180.0 99207.0 125320.0 110520.0 123790.0 110030.0 116350.0 148990.0 111970.0 True False 164971.26162392192 152484.71236491812 105602.04195681229 137230.37512116804 119217.29522721912 123017.38069243108 121152.90618931697 115946.40900629408 121937.17173225748 110978.03291134194 1.486521767381785 1.3740080659632434 0.9515580623164909 1.2365544019941184 1.0742422811049404 1.1084840618026373 1.0916836693808 1.0447690048617213 1.0987505232650012 1.0 16.7599146109562 -4.626908574242971 5.378108942716357 1.0855811399800528 1.459513125805747 0.7964699610324524 0.07235880142538727 0.07493294110999986 3.1990532075484124 0.017511771443909824 0.04867143650018925 2.3609752029454128e-05 4.626908574242971 0.3739319858256942 HSTENDS(ph)PTNVQQ ddPTM_KYSE-520_SHP099_60min_R1 3 HSTENDSPTNVQQ 13 0 P49354-2;P49354;B3KVN2 P49354-2 FNTA Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha 1 HS(0.001)T(0.005)ENDS(0.99)PT(0.004)NVQQ;HSTENDS(0.997)PT(0.003)NVQQ;HST(0.001)ENDS(0.999)PTNVQQ 185.67 3.0805e-08 518411000.0 274739.0 413045.0 438135.0 791000.0 284915.0 347041.0 294850.0 252920.0 373028.0 332790.0 True False 259498.679991382 393201.6982068148 466377.8831407859 866176.402177178 307336.18955540366 344874.98839067743 324656.31545869395 252042.67955197187 305295.51847063855 329841.7395067022 0.7867369374763716 1.1920919978013431 1.4139444081221546 2.626036363598482 0.9317686415765425 1.0455771574163366 0.9842790543860115 0.7641321560119001 0.9255818227469514 1.0 18.331414449225207 HSVT(ph)GYGDCAVGAR ddPTM_KYSE-520_SHP099_60min_R1 2 HSVTGYGDCAVGAR 14 0 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 HS(0.36)VT(0.64)GYGDCAVGAR;HS(0.08)VT(0.92)GYGDCAVGAR 219.84 2.7705e-13 817070000.0 420440.0 352490.0 325190.0 361040.0 339010.0 313090.0 356220.0 430920.0 399310.0 376700.0 True False 397117.35507363884 335555.85130172345 346152.2677223964 395353.1330493661 365688.15829695604 311135.889175161 392230.1939721751 429425.2390974841 326805.3697859429 373362.7310681652 1.0636234471970818 0.8987395457005608 0.9271205691368243 1.0588982245718201 0.9794447272515584 0.8333340831448884 1.0505338678288307 1.1501556083782865 0.8753026014433072 1.0 18.51021839989438 HSVTAAT(ph)PPPS(ph)PTSGESGDLLSNLLQS(ph)PSSAK ddPTM_KYSE-520_SHP099_60min_R1 4 HSVTAATPPPSPTSGESGDLLSNLLQSPSSAK 32 0 Q96QU8;Q96QU8-2 Q96QU8 XPO6 Exportin-6 3 HSVT(0.002)AAT(0.997)PPPS(0.908)PT(0.045)S(0.045)GES(0.003)GDLLSNLLQS(0.995)PS(0.004)S(0.001)AK;HSVTAAT(1)PPPS(0.918)PT(0.041)S(0.041)GESGDLLSNLLQS(0.999)PS(0.001)SAK;HSVT(0.001)AAT(0.999)PPPS(0.989)PT(0.006)S(0.005)GESGDLLSNLLQS(0.999)PS(0.001)SAK;HSVT(0.004)AAT(0.996)PPPS(0.912)PT(0.047)S(0.04)GES(0.002)GDLLSNLLQS(0.99)PS(0.008)S(0.002)AK 235.17 4.5299e-31 1902710000.0 1709220.0 1522370.0 1400390.0 1777580.0 1722540.0 1749060.0 1604280.0 1681300.0 2017340.0 1717430.0 True False 1614406.1593544025 1449233.0600760414 1490661.3801032207 1946520.668751083 1858094.0980880768 1738143.4677591359 1766456.2786639773 1675467.9627183694 1651041.9090029676 1702214.906340321 0.9484150052623478 0.851380783165518 0.8757186736826725 1.1435222788267125 1.0915743312828157 1.0211069479446984 1.0377398717896156 0.9842869760320356 0.9699374049970149 1.0 20.69898175954365 -5.235084807760911 24.821768117302888 1.0366338183912953 0.8877923811200487 0.6039597079830321 0.05325714889035844 486.01517563425233 457747.46530917805 0.015486724549376883 0.02681456048784057 5.819895574487176e-06 5.235084807760911 -0.14884143727124666 HSVTAAT(ph)PPPS(ph)PTSGESGDLLSNLLQSPSSAK ddPTM_KYSE-520_SHP099_60min_R1 8 HSVTAATPPPSPTSGESGDLLSNLLQSPSSAK 32 0 Q96QU8;Q96QU8-2 Q96QU8 XPO6 Exportin-6 2 HSVT(0.004)AAT(0.918)PPPS(0.358)PT(0.358)S(0.358)GES(0.004)GDLLSNLLQSPSSAK;HSVTAAT(0.999)PPPS(0.702)PT(0.16)S(0.132)GES(0.006)GDLLSNLLQSPSSAK;HSVTAAT(0.987)PPPS(0.825)PT(0.161)S(0.027)GESGDLLSNLLQSPSSAK;HSVTAAT(0.999)PPPS(0.904)PT(0.053)S(0.043)GESGDLLSNLLQSPSSAK;HSVT(0.002)AAT(0.998)PPPS(0.968)PT(0.009)S(0.023)GESGDLLSNLLQSPSSAK;HSVT(0.002)AAT(0.996)PPPS(0.974)PT(0.015)S(0.013)GESGDLLSNLLQSPSSAK;HS(0.002)VT(0.014)AAT(0.976)PPPS(0.591)PT(0.159)S(0.142)GES(0.113)GDLLS(0.002)NLLQSPSSAK;HSVT(0.002)AAT(0.996)PPPS(0.801)PT(0.102)S(0.087)GES(0.012)GDLLSNLLQSPSSAK 285.27 2.5439e-53 13304690000.0 3223320.0 2969710.0 2889490.0 3829770.0 3490820.0 3744640.0 3500570.0 3665560.0 4169870.0 3392730.0 True False 3044516.0140708867 2827040.6739744097 3075751.1487474632 4193750.1893376675 3765527.6739511546 3721268.3127563163 3854441.7778709205 3652845.0279081394 3412726.721868502 3362673.0517040025 0.905385675996097 0.840712323352945 0.914674457330562 1.2471477675215925 1.1198019004681437 1.1066399425512388 1.146243395835857 1.0862920574621713 1.0148850837993706 1.0 21.68117708365841 -5.108129365232761 6.535945061159526 1.108790269069878 0.874208268479631 0.6916695277990238 0.06637586545196339 0.12392977833274 6.460437532276704 0.017904173858299715 0.03143250854882312 7.795978536463309e-06 5.108129365232761 -0.23458200059024714 HSVTAAT(ph)PPPSPTSGESGDLLSNLLQSPSSAK ddPTM_KYSE-520_SHP099_60min_R1 1 HSVTAATPPPSPTSGESGDLLSNLLQSPSSAK 32 0 Q96QU8;Q96QU8-2 Q96QU8 XPO6 Exportin-6 1 HS(0.002)VT(0.007)AAT(0.771)PPPS(0.147)PT(0.036)S(0.029)GES(0.008)GDLLSNLLQSPSSAK 103.3 0.0013402000000000002 218240000.0 89424.0 114680.0 81366.0 103330.0 77986.0 123340.0 85556.0 105980.0 118440.0 105820.0 True False 84463.47245767555 109170.60066181062 86610.98255020291 113150.4521327026 84123.05452035755 122570.18930935017 94204.83542609462 105612.38011591794 96934.28162942847 104882.51712671424 0.8053150779708181 1.040884635996252 0.825790464635431 1.0788304403106517 0.8020693708058506 1.1686427125053311 0.8981938840415191 1.0069588622508163 0.9242177274627851 1.0 16.678414689466965 -5.252183739591072 24.973605800187407 0.9796918274139235 0.9056855308693496 0.1220031959548944 0.11076646522826505 1654.088499282256 4463060.655724824 0.027877256015214135 0.04744493201016391 5.5952083155318545e-06 5.252183739591072 -0.07400629654457391 HSVTAATPPPS(ph)PTSGESGDLLSNLLQSPSSAK ddPTM_KYSE-520_SHP099_60min_R1 2 HSVTAATPPPSPTSGESGDLLSNLLQSPSSAK 32 0 Q96QU8;Q96QU8-2 Q96QU8 XPO6 Exportin-6 1 HSVTAATPPPS(0.628)PT(0.166)S(0.166)GES(0.039)GDLLS(0.001)NLLQSPSSAK;HSVTAAT(0.012)PPPS(0.857)PT(0.038)S(0.038)GES(0.042)GDLLS(0.012)NLLQSPSSAK 122.3 0.00010409 679570000.0 292800.0 423360.0 272259.0 384230.0 300620.0 494780.0 343490.0 466310.0 504670.0 492930.0 True False 276557.8003176706 403021.15012368455 289809.25076980196 420747.103677038 324277.0837061764 491691.89449067845 378213.3213393482 464692.4794475727 413034.64969540475 488563.0236937374 0.5660637152332567 0.824911281817193 0.59318703363739 0.861193097455507 0.6637364433650919 1.006404231685987 0.7741341505542109 0.9511413203854571 0.8454071013657417 1.0 18.898185153530477 -2.7484495358704604 0.1701924673917575 1.0276522772085375 5.19975298476116e-12 0.4938230132844914 0.10739653985219184 27.64644000800378 0.5069004500499494 0.28604576149444266 6.502997727173282 0.0017846393479307822 2.7484495358704604 -1.0276522772033376 HSVTAATPPPSPTSGES(ph)GDLLSNLLQSPSSAK ddPTM_KYSE-520_SHP099_60min_R1 1 HSVTAATPPPSPTSGESGDLLSNLLQSPSSAK 32 0 Q96QU8;Q96QU8-2 Q96QU8 XPO6 Exportin-6 1 HSVTAAT(0.003)PPPS(0.114)PT(0.126)S(0.126)GES(0.496)GDLLS(0.135)NLLQSPSSAK 74.561 0.010729 459100000.0 114710.0 187120.0 117290.0 148800.0 127660.0 173330.0 132980.0 149530.0 188490.0 195520.0 True False 108346.80763128413 178130.47432715382 124850.70107063522 162941.9072616485 137706.11571395947 172248.18317650096 146422.9161597325 149011.31533056434 154264.967446226 193787.84491225824 0.5591001214773845 0.9192035465785089 0.6442648718611023 0.8408262516951158 0.7106024414292289 0.8888492632470842 0.7555835931094065 0.7689404637222346 0.796050792123071 1.0 17.564118556878356 -13.999999999743334 0.16710584857353641 1.8698043149470294 0.7143922211404778 0.3603873339819995 0.0997752413545695 145.98789712588288 1.3665459825195163 42.19216456658624 0.3484868854809556 1.0000000005909949e-14 13.999999999743334 -1.1554120938065515 HSWDGLR ddPTM_KYSE-520_SHP099_60min_R1 4 HSWDGLR 7 0 M0R145;M0QXG6;M0R0I1;M0R3C4;M0R2G6;M0R2A8;Q86TI2-4;Q86TI2;Q86TI2-2 M0R145 DPP9 Dipeptidyl peptidase 9 0 ;;; 151.29 0.0022193 2885400000.0 809530.0 826100.0 482330.0 480589.0 811440.0 821210.0 581483.0 630050.0 571670.0 660690.0 False True 764623.7571419538 786412.915998619 513421.76355528564 526264.034065648 875295.7115379558 816084.5237776167 640264.9763671963 627864.5036047758 467869.13862795825 654836.8006090419 1.1676554470225293 1.2009296289811484 0.7840453729505873 0.8036567791794648 1.3366623725543103 1.2462410833028987 0.9777473956437804 0.9588106578934169 0.7144820483406075 1.0 19.320775875302484 -7.261705367130857 2.6880634213967944 0.8619215960152018 1.0785983654770213 0.19027084695541308 0.18170228299145863 0.5205468615528747 7.379703196106841 0.12479616783257476 0.055655099482775985 5.4738719387104523e-08 7.261705367130857 0.21667676946181946 HSYFEKPK ddPTM_KYSE-520_SHP099_60min_R1 2 HSYFEKPK 8 1 Q13123;A0A0C4DGW5 Q13123 IK Protein Red 0 ; 195.17 4.1537e-06 1007310000.0 3214900.0 2768000.0 2176780.0 2075400.0 3286400.0 2856800.0 2340300.0 2684700.0 2617400.0 2048550.0 False True 3036563.0882557346 2635021.1251472933 2317098.721771143 2272645.3920082394 3545020.9829418473 2838969.6515238453 2576880.3631269513 2675387.4023136892 2142146.139284587 2030401.4407477814 1.4955481351202113 1.2977833212021535 1.14120226437476 1.119308401973573 1.7459704823870905 1.3982307116952568 1.2691482144427093 1.317664255265877 1.0550357659791902 1.0 20.953333567334774 -7.784623290786103 2.92184211920336 0.9955699434628775 1.3483148717775788 0.3675831615191809 0.16932530244357805 0.2961268479775627 4.76833636842789 0.16753658036885982 0.04699700856808607 1.6420134463664506e-08 7.784623290786103 0.3527449283147013 HSYPPALGS(ph)PGALAGAGVGAAGPLER ddPTM_KYSE-520_SHP099_60min_R1 1 HSYPPALGSPGALAGAGVGAAGPLER 26 0 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 HSYPPALGS(1)PGALAGAGVGAAGPLER 252.77 8.7291e-30 14504000000.0 332540.0 352150.0 274330.0 309710.0 262590.0 345900.0 283820.0 315370.0 446140.0 289180.0 True False 314093.34329794487 335232.18541207345 292013.75074351934 339144.74528229306 283254.33906727715 343741.1097949098 312511.29541626765 314276.0550779112 365132.2222741751 286618.0901786358 1.0958601500072276 1.1696127945139079 1.018825261732505 1.18326357234088 0.9882639957957219 1.1993001194749147 1.09034044299679 1.0964976247034424 1.2739329260292156 1.0 18.128770144006758 HT(ph)GEKHFK ddPTM_KYSE-520_SHP099_60min_R1 3 HTGEKHFK 8 1 D6RGC2;D6RIY0;A0A087WTY0;Q15928;B4DXR9;Q8TF20;Q8TF20-2 D6RGC2 ZNF721;ZNF141;ZNF732 Zinc finger protein 141;Zinc finger protein 732;Zinc finger protein 721 1 HT(1)GEKHFK;HT(1)GEKHFK;HT(1)GEKHFK 73.931 0.05002 3249610000.0 3037490.0 3538120.0 2277820.0 3021860.0 4421000.0 2115480.0 2016560.0 2597120.0 2844720.0 1839300.0 True False 2868994.374613805 3368143.404373612 2424651.9218408586 3309056.665844666 4768907.547950931 2102276.5046225362 2220413.564529028 2588111.1968923644 2328190.557555452 1823005.232953746 1.5737718810413301 1.8475774745398492 1.3300301491248532 1.8151657526967857 2.615959330091473 1.1531927975962513 1.217996264844164 1.4196948807979812 1.277116771509851 1.0 20.79788727197691 HT(ph)PPTIGGSLPYR ddPTM_KYSE-520_SHP099_60min_R1 1 HTPPTIGGSLPYR 13 0 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;E9PEZ7 H7C3Q7 ABI2 Abl interactor 2 1 HT(0.519)PPT(0.481)IGGSLPYR 104.21 0.0016687999999999998 0.0 94437.0 90895.0 78423.0 80171.0 91572.0 104090.0 78815.0 86352.0 98500.0 83465.0 True False 89198.39135450774 86528.26776382356 83478.27206123658 87790.42773570998 98778.19542659166 103440.33569977494 86782.38936027465 86052.46506670833 80614.88298293402 82725.56503478733 1.078244570671696 1.0459676851700819 1.009098844185987 1.061224878896781 1.194046790554455 1.250403495657923 1.0490395480983583 1.0402161052695378 0.9744857342350489 1.0 16.336045620062503 -9.922973118560348 5.521699660208132 0.9999999083516246 1.0811229501781423 0.07980233196022113 0.07893636049843628 9.907995640557455e-08 1.938875086139107e-08 0.08502473704813802 0.02062150438991042 1.1940620107970886e-10 9.922973118560348 0.08112304182651775 HT(ph)Y(ph)DTFK ddPTM_KYSE-520_SHP099_60min_R1 1 HTYDTFK 7 0 H0YEE3;O00458-2;O00458 H0YEE3 IFRD1 Interferon-related developmental regulator 1 2 HT(0.618)Y(0.764)DT(0.618)FK 50.878 0.051319000000000004 0.0 27739.0 64138.0 72153.0 117920.0 92034.0 30462.0 54675.0 71304.0 71774.0 28072.0 True False 26200.262373674424 61056.71420689925 76804.09782888179 129127.08134605922 99276.55219817124 30271.875358694826 60202.08257657822 71056.66306647872 58741.65087530054 27823.30391968553 0.9416661101536984 2.1944451450893445 2.7604233505331974 4.64096865414676 3.5681079603177945 1.0880043378772455 2.163728748762438 2.553854253671317 2.1112392347387496 1.0 14.764006124574431 -6.256715785572828 24.95845025532752 1.9042539277245305 2.8840372377080787 0.20906339871478963 0.9916891716193983 762.9815867591109 4031434.542524646 0.364301184058917 0.3530513323531909 5.537123554865627e-07 6.256715785572828 0.9797833099835482 HTDDEMT(ph)GYVATR ddPTM_KYSE-520_SHP099_60min_R1 2 HTDDEMTGYVATR 13 0 E7EX54;B4E0K5;Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539 E7EX54 MAPK14 Mitogen-activated protein kinase 14 1 HTDDEMT(0.525)GY(0.475)VATR;HTDDEMT(0.679)GY(0.225)VAT(0.097)R 225.01 5.3025e-17 1953360000.0 1516730.0 1523250.0 1662370.0 1183200.0 1330880.0 1541770.0 1301680.0 1498210.0 1812650.0 1701920.0 True False 1432593.9633737043 1450070.7835551358 1769529.0300860433 1295650.9722579492 1435612.6843286413 1532147.2415394564 1433266.5175725715 1493013.0591948414 1483518.4531879728 1686842.3128737225 0.8492755679889972 0.859636240144332 1.0490186406762911 0.7680925255252012 0.8510651371336045 0.9082931047237451 0.8496742740172574 0.8850934362983393 0.8794648094051156 1.0 20.685893685173763 -8.909256381262917 1.8797075456908199 1.0000140814773786 0.8783081193956396 0.23020457514505177 0.06707256184925312 61.300763279489345 122.91038395140392 0.06504597755263025 0.017769529856120826 1.2323770973503248e-09 8.909256381262917 -0.121705962081739 HTDDEMTGY(ph)VATR ddPTM_KYSE-520_SHP099_60min_R1 6 HTDDEMTGYVATR 13 0 E7EX54;B4E0K5;Q16539-5;Q16539-3;Q16539-4;Q16539-2;Q16539 E7EX54 MAPK14 Mitogen-activated protein kinase 14 1 HTDDEMT(0.382)GY(0.618)VATR;HTDDEMTGY(1)VATR;HTDDEMTGY(1)VATR;HTDDEMT(0.015)GY(0.985)VATR;HTDDEMT(0.048)GY(0.952)VATR;HTDDEMTGY(1)VATR 267.85 2.8611e-26 6642160000.0 3312900.0 2753250.0 2948040.0 2452750.0 2812830.0 2914940.0 2817810.0 3061950.0 3898270.0 3294940.0 True False 3129126.832897578 2620979.7372874985 3138075.375430775 2685858.622553822 3034183.7181865633 2896746.778217906 3102661.7339754496 3051328.810114502 3190442.435389669 3265749.395024528 0.9581650195403546 0.8025660944102582 0.9609051387138682 0.8224325561066665 0.9290926373007181 0.8870082874794959 0.9500611831092896 0.9343426090083022 0.9769403740073898 1.0 21.638982655867675 -7.345575651735557 0.7561039561844236 0.9985719727745066 0.8861410268747729 0.35661035369923366 0.049651134190056255 0.6525093237939287 0.7179951710733885 0.04222019249452837 0.019054808455336 4.512574119084771e-08 7.345575651735557 -0.11243094589973368 HTDEEFLK ddPTM_KYSE-520_SHP099_60min_R1 1 HTDEEFLK 8 0 E9PC05;F8SNU7;Q9H0C8;H7C2I8 E9PC05 ILKAP;ILKAP3 Integrin-linked kinase-associated serine/threonine phosphatase 2C 0 103.56 0.0022405999999999997 0.0 142110.0 124000.0 85685.0 80352.0 115900.0 134430.0 94757.0 108100.0 110400.0 108000.0 False True 134226.87501073835 118042.85387220538 91208.39220084743 87988.62992129035 125020.67061920665 133590.97250572327 104335.9622992011 107725.02633072967 90354.14295752202 107043.20402272853 1.2539504608086833 1.1027589742842645 0.8520708347022302 0.821991743657147 1.167945894002397 1.2480098454205262 0.9747088874231324 1.006369599212075 0.8440904192136951 1.0 16.70783367899782 -4.459826580490664 4.320542342401934 0.9973703774877996 1.236361269546578 0.28326556842321915 0.13003817415277183 0.3236080058520732 11.543689753958219 0.03609835302519916 0.15609376639544684 3.468753346933306e-05 4.459826580490664 0.23899089205877844 HTDVQFYTEVGEITTDLGK ddPTM_KYSE-520_SHP099_60min_R1 1 HTDVQFYTEVGEITTDLGK 19 0 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 0 96.48700000000001 0.00019966 0.0 98738.0 85041.0 53427.0 79833.0 78829.0 59199.0 74396.0 76283.0 70050.0 51038.0 False True 93260.80631067696 80955.50271085672 56870.98990622245 87420.30431733324 85032.39382434376 58829.517082245955 81916.67371499073 76018.39207758613 57330.68581679727 50585.84302696317 1.8436147493077708 1.6003588724953337 1.1242471510440022 1.7281575058606147 1.6809523917397196 1.1629640540118855 1.6193596629659341 1.5027602097501263 1.1333345929658416 1.0 15.626446067779527 -11.577313524360017 0.10780445140373952 1.2714584210385903e-13 1.8722772551224112 0.4004546405759125 0.22306274796264988 97.58755022370316 1.2600438657249082 26.894107735605136 3.7020371274416175 2.6465888325943e-12 11.577313524360017 1.872277255122284 HTENTFSRPGGR ddPTM_KYSE-520_SHP099_60min_R1 1 HTENTFSRPGGR 12 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;E9PGZ1;C9J813;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 0 87.184 0.0031256 411270000.0 19608.0 16819.0 10300.0 20232.0 13094.0 20447.0 17610.0 13087.0 22151.0 12490.0 False True 18520.305152421064 16010.989994166306 10963.954480582694 22154.8431970274 14124.42330533125 20319.382688570462 19390.190657037805 13041.60425152877 18128.936781268752 12379.348317072954 1.4960646294182403 1.2933629124955455 0.8856649154513067 1.7896615096024555 1.1409666279323911 1.641393566779846 1.5663337164764854 1.0534968333948942 1.4644500111743575 1.0 13.595647748667583 -9.157630906652367 0.8568857306681178 0.9906863177016082 1.3692260957405649 0.14621666932784327 0.2661271860626467 19.173284330604393 12.074036705120818 0.9035888562382732 0.08501269905248629 6.956152481706616e-10 9.157630906652367 0.37853977803895666 HTGPNS(ph)PDTANDGFVR ddPTM_KYSE-520_SHP099_60min_R1 13 HTGPNSPDTANDGFVR 16 0 P31943;G8JLB6;E9PCY7;D6RBM0;E5RGV0;D6R9T0;D6RFM3;D6RIT2;D6RIU0;D6RDU3;D6RJ04;D6RIH9;D6RAM1;E7EQJ0;H0YAQ2;E5RGH4;P55795 P31943;P55795 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 1 HTGPNS(1)PDTANDGFVR;HTGPNS(1)PDTANDGFVR;HT(0.027)GPNS(0.973)PDTANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(0.998)PDT(0.002)ANDGFVR;HT(0.001)GPNS(0.785)PDT(0.215)ANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(0.97)PDT(0.03)ANDGFVR;HT(0.001)GPNS(0.845)PDT(0.154)ANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(0.972)PDT(0.027)ANDGFVR;HTGPNS(1)PDTANDGFVR;HTGPNS(1)PDTANDGFVR 373.62 3.5919999999999993e-72 52333510000.0 14315080.0 12914300.0 13072560.0 12013560.0 13024380.0 13268260.0 12382470.0 13454970.0 16197470.0 13161410.0 True False 13520993.975995492 12293877.64324051 13915238.134435553 13155325.130391471 14049324.607414866 13185447.867728861 13634210.908861501 13408297.849483594 13256417.752990706 13044810.146822028 1.036503699464685 0.9424343861559028 1.0667259989081235 1.008471950325499 1.0770049122437828 1.010781124395367 1.0451827780861236 1.0278645452536632 1.0162215933989833 1.0 23.636972611645437 -4.772457039456426 24.999839436187703 1.033073709826703 0.9894690262150877 0.2170829828990526 0.031844604425993815 247.4304320370352 561440.4311653455 0.0075926424162933975 0.016040176415360312 1.688662894277345e-05 4.772457039456426 -0.0436046836116154 HTIIPAKS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 2 HTIIPAKSPEK 11 1 Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-5;Q9NZM1-3 Q9NZM1-2 MYOF Myoferlin 1 HTIIPAKS(1)PEK;HTIIPAKS(1)PEK 123.02 0.00042785 1293400000.0 1425150.0 1819980.0 1538790.0 1783620.0 1823100.0 1897770.0 1773360.0 2114430.0 2275460.0 1772880.0 True False 1346094.0885339093 1732545.4289543265 1637982.8655510535 1953134.7085350945 1966567.5979799442 1885925.3134879624 1952628.5351257587 2107095.5358416704 1862293.8236786537 1757173.6624797673 0.766056376371057 0.9859841778582745 0.932169028324435 1.1115205914131345 1.1191651912222922 1.0732720127539912 1.1112325302953612 1.1991390383509872 1.0598234331890328 1.0 20.744825350094104 -3.690557206596486 0.7044674828192274 1.1098793756820615 0.23701161083053085 0.7254786999305081 0.06071888009851649 2.927334269344042 0.6244489172389134 0.02387933555948562 2.440886993053912 0.00020391200427933117 3.690557206596486 -0.8728677648515306 HTLGDS(ph)DNES ddPTM_KYSE-520_SHP099_60min_R1 1 HTLGDSDNES 10 0 G3V1D1;G3V192;P02794 G3V1D1 FTH1 Ferritin;Ferritin heavy chain;Ferritin heavy chain, N-terminally processed 1 HTLGDS(0.966)DNES(0.034) 93.62299999999999 0.0052718999999999995 2878800000.0 537800.0 493610.0 519620.0 482600.0 525190.0 571860.0 482170.0 482370.0 641490.0 495110.0 True False 507967.16192227876 469896.2346762853 553115.5366213953 528466.1589010191 566519.465077662 568290.8096193034 530912.4491257193 480696.77105600486 525011.5866469279 490723.71058975183 1.035138818362381 0.9575576328104545 1.127142472811556 1.0769118090216354 1.1544570862427226 1.1580667437820182 1.0818968753062055 0.9795670367716762 1.06987205899623 1.0 18.904551455082476 -7.175491993936873 8.225923461976482 1.018696769985412 1.086644153567629 0.21509993811453354 0.05938305210705738 0.5488852955578236 47.7114248475581 0.030744826053367747 0.017701751320372987 6.675872075817865e-08 7.175491993936873 0.06794738358221708 HTLQQHQET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 HTLQQHQETPK 11 0 Q7Z417;Q7Z417-2 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 HTLQQHQET(1)PK;HTLQQHQET(1)PK;HTLQQHQET(1)PK;HTLQQHQET(1)PK;HTLQQHQET(1)PK;HTLQQHQET(1)PK;HTLQQHQET(1)PK 210.37 2.5622e-09 7062640000.0 2543730.0 2353080.0 2167410.0 2165110.0 2113550.0 2028520.0 1957170.0 1947600.0 2375570.0 1953200.0 True False 2402624.2260999624 2240034.5047549107 2307124.716578613 2370881.403435941 2279874.360545505 2015859.2542387105 2155019.843738485 1940844.2301732583 1944226.3712463835 1935896.1675666047 1.241091472958505 1.1571046744571036 1.191760568170677 1.2246945074621987 1.1776842160968148 1.0413054625613616 1.1131897876771542 1.0025559545442322 1.0043030219385423 1.0 20.88457014458445 -6.5259414111934735 0.9762634017608044 1.0020915626761178 1.2062524396491094 0.8413399720239723 0.03630663515514694 0.21200293237966747 0.41601226187000345 0.024318785771851408 0.017177840536844517 2.978918275415417e-07 6.5259414111934735 0.20416087697299168 HTNFVEFR ddPTM_KYSE-520_SHP099_60min_R1 1 HTNFVEFR 8 0 M0R0N4;M0QYZ2;P53680;M0QZ21 M0R0N4 AP2S1 AP-2 complex subunit sigma 0 111.46 0.0018170000000000003 323190000.0 97557.0 73634.0 65737.0 53393.0 73383.0 68870.0 57280.0 72213.0 57944.0 73240.0 False True 92145.31873494209 70096.5121131126 69974.51220291892 58467.454666809164 79157.82460784509 68440.1567839707 63070.4213989282 71962.50995764097 47422.83024937189 72591.15057985773 1.2693739939219282 0.965634399691726 0.9639537552988606 0.8054350179019267 1.0904610820400669 0.9428168066943572 0.8688444926843287 0.991339982667375 0.6532866591941107 1.0 16.147506062856962 -4.127355024959236 2.0115508245920424 0.9152236187571348 1.468227591380707 0.46364961290538154 0.11385569885169211 1.0390416981962047 3.3523503417051854 0.029181057437963637 1.18942491021251 7.458388044229267e-05 4.127355024959236 0.5530039726235723 HTNYTMEHIR ddPTM_KYSE-520_SHP099_60min_R1 21 HTNYTMEHIR 10 0 P12814-3;P12814;P12814-2;P12814-4;H9KV75;A0A494C1A0;P35609;P35609-2;H7C5W8;F6THM6;H0YJ11;H0YJW3;A0A494C060;O43707;O43707-2;F5GXS2;O43707-3;H7C144 P12814-3;O43707 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 0 ;;;;;;;;;;;;;;;;;;;; 204.17 7.3967e-07 80654464000.0 14795126.0 12090503.0 8984094.0 10279354.0 15402047.0 11646328.0 10505840.0 10289914.0 10168168.0 8617606.0 False True 13974410.867427533 11509657.08766502 9563223.074298637 11256300.713559525 16614100.473240199 11573638.946965966 11567872.834317679 10254220.690017981 8321885.009855982 8541260.715236021 1.6361063469822181 1.3475360923164341 1.119650060235209 1.3178734485273793 1.9451578668713077 1.355027007467498 1.3543519182926642 1.2005511869841836 0.974315769920392 1.0 23.026017600924064 -7.424154190412996 1.7345591942448806 0.9790194886773242 1.4454251675552565 0.441785368714657 0.2073176002405478 0.39870933922025187 2.1404872429869717 0.18760112399898035 0.06502768605727255 3.7657007910721014e-08 7.424154190412996 0.4664056788779323 HTPLRT(ph)SLR ddPTM_KYSE-520_SHP099_60min_R1 1 HTPLRTSLR 9 1 Q9HCD6;Q9HCD6-2;J3KRP9;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 HTPLRT(0.661)S(0.339)LR 80.014 0.011329 0.0 138910.0 130320.0 145340.0 92872.0 126720.0 117940.0 99822.0 100890.0 154870.0 115240.0 True False 131204.38538978022 124059.23158569212 154708.84895222198 101698.52695701506 136692.14306182778 117203.8927123784 109912.98192883749 100540.03613790302 126749.51195499489 114219.06325536325 1.1487082948355332 1.0861517162711174 1.354492363558738 0.8903813781911727 1.1967541946673188 1.0261324981307356 0.9622998017686547 0.8802386683308934 1.109705405932256 1.0 16.801443932219495 -5.981845667756955 0.9591269802944834 0.9797800803280428 1.1639972204461557 0.2448890877425799 0.12025980449512655 0.7573749120037712 1.5121594672175518 0.061033157959763946 0.07484017127003523 1.0426878963905956e-06 5.981845667756955 0.18421714011811297 HTPLRTS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 2 HTPLRTSLR 9 1 Q9HCD6;Q9HCD6-2;J3KRP9;Q9HCD6-3;Q9HCD6-4 Q9HCD6 TANC2 Protein TANC2 1 HT(0.001)PLRT(0.192)S(0.806)LR;HT(0.006)PLRT(0.38)S(0.614)LR 90.913 0.0026244 699540000.0 365530.0 409470.0 395820.0 276400.0 329000.0 330540.0 276010.0 255760.0 416000.0 336960.0 True False 345253.32223401003 389798.4465729995 421335.1905343922 302668.9728973096 354890.4282460657 328476.9772524124 303911.784398013 254872.8282548327 340464.8865066049 333974.79655091336 1.033770589276719 1.1671492897026918 1.2615778043303967 0.9062629157142661 1.0626263775325446 0.9835382209817056 0.9099841890365001 0.7631498870184301 1.0194328734464913 1.0 18.349379708085344 -5.747117436372925 1.1047754892239097 0.9150851827870212 1.1454484763746966 0.38576531349640275 0.10335302236307513 0.48002936995013146 1.2436634181999255 0.04488119656519893 0.0684416288194684 1.7901217267041015e-06 5.747117436372925 0.23036329358767538 HTPPTIGGS(ph)LPYR ddPTM_KYSE-520_SHP099_60min_R1 2 HTPPTIGGSLPYR 13 0 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9;E9PEZ7 H7C3Q7 ABI2 Abl interactor 2 1 HTPPTIGGS(1)LPYR;HTPPTIGGS(1)LPYR 153.03 1.3375e-05 221220000.0 430000.0 388020.0 362220.0 332740.0 358090.0 367400.0 306650.0 338630.0 375880.0 308220.0 True False 406147.04281625134 369378.93677010597 385569.2807724916 364363.50955807127 386269.6457466062 365106.9203198896 337649.17461559596 337455.3715668365 307629.667163708 305489.41059153137 1.3294963057142064 1.209138267853091 1.2621363209477485 1.1927205884241279 1.264428920788635 1.1951540958913058 1.105272925702375 1.1046385238473837 1.0070059926726507 1.0 18.22076284612774 -7.06588578421179 0.7964152983795275 0.9934949058552444 1.257843305015269 0.869938848800931 0.03771480923407405 0.21069268495849292 0.2488402781672026 0.03200318316283346 0.015861630231366684 8.592394645304515e-08 7.06588578421179 0.2643483991600247 HTPS(ph)PGLPAEGAPEAPRPS(ph)SPPPEVLEPHSLDQPPATSPR ddPTM_KYSE-520_SHP099_60min_R1 2 HTPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPR 40 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 HT(0.032)PS(0.968)PGLPAEGAPEAPRPS(0.532)S(0.467)PPPEVLEPHSLDQPPATSPR;HT(0.174)PS(0.826)PGLPAEGAPEAPRPS(0.523)S(0.475)PPPEVLEPHS(0.001)LDQPPATSPR 154.93 7.0169e-08 2440400000.0 308382.0 249953.0 229024.0 277028.0 254871.0 260502.0 196834.0 206508.0 289584.0 202980.0 True False 291275.43571572384 237944.882692898 243787.2534913564 303356.65782849496 274927.89768237935 258876.11038968974 216731.90163471774 205791.67194732942 237002.84541857845 201181.7551160506 1.4478223214013775 1.182735892504968 1.2117761541086518 1.5078736024223733 1.3665647639060943 1.286777273815702 1.077294019577954 1.0229141893538984 1.1780533740838708 1.0 17.618139949574772 -6.714462420892398 3.951868877360768 1.0688004484693543 1.3352554122091316 0.6273030260746595 0.10047488582164797 0.15763784483519222 5.112208405496894 0.043180084482783695 0.03142045414761483 1.929912322527735e-07 6.714462420892398 0.2664549637397773 HTPS(ph)PGLPAEGAPEAPRPS(ph)SPPPEVLEPHSLDQPPATSPRPLIEVGELLDLTR ddPTM_KYSE-520_SHP099_60min_R1 5 HTPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPRPLIEVGELLDLTR 53 2 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 HT(0.188)PS(0.812)PGLPAEGAPEAPRPS(0.514)S(0.486)PPPEVLEPHSLDQPPATSPRPLIEVGELLDLTR;HT(0.181)PS(0.813)PGLPAEGAPEAPRPS(0.523)S(0.483)PPPEVLEPHSLDQPPATSPRPLIEVGELLDLTR;HT(0.174)PS(0.826)PGLPAEGAPEAPRPS(0.53)S(0.47)PPPEVLEPHSLDQPPATSPRPLIEVGELLDLTR;HT(0.178)PS(0.822)PGLPAEGAPEAPRPS(0.52)S(0.478)PPPEVLEPHS(0.002)LDQPPATSPRPLIEVGELLDLTR;HT(0.218)PS(0.782)PGLPAEGAPEAPRPS(0.516)S(0.482)PPPEVLEPHS(0.002)LDQPPATSPRPLIEVGELLDLTR 147.39 1.022e-09 2520100000.0 47900.2 58887.0 46046.2 28922.7 37572.2 39266.0 31545.1 24400.0 51460.6 34236.6 True False 45243.08041931862 56057.980128810945 49014.41172852492 31671.504712073147 40528.918383424956 39020.92632901687 34733.98655850785 24315.362095002798 42116.652256158166 33933.290359671744 1.3332948246329828 1.652005435801576 1.4444343949261238 0.9333461145787786 1.1943704236707864 1.1499305229589984 1.0235961850545356 0.7165636411109888 1.2411602827119883 1.0 15.050413708078349 -5.198335993080598 5.837649336368852 1.036138335685055 1.5012838349017397 0.6212267799368625 0.1571858128819653 0.14012796258220306 9.627516529875345 0.04282947588278777 0.07482822186824178 6.333795059183038e-06 5.198335993080598 0.4651454992166846 HTPSPGLPAEGAPEAPRPS(ph)SPPPEVLEPHSLDQPPAT(ph)SPRPLIEVGELLDLTR ddPTM_KYSE-520_SHP099_60min_R1 1 HTPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPRPLIEVGELLDLTR 53 2 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 HTPSPGLPAEGAPEAPRPS(0.498)S(0.498)PPPEVLEPHS(0.012)LDQPPAT(0.724)S(0.266)PRPLIEVGELLDLT(0.001)R 62.96 0.0031903 91973000.0 13263.0 14639.0 9214.2 19960.0 9899.7 9572.5 11607.0 14441.0 23568.0 10697.0 True False 12527.274950864983 13935.72046641303 9808.16207524127 21856.992398807186 10678.75006841208 9512.754476761416 12780.348833403628 14390.90754155473 19288.64530093187 10602.232902140067 1.1815694926241758 1.314413727281929 0.9251034348869553 2.0615461479246826 1.0072170803054674 0.8972406628457729 1.2054393589886059 1.357346860268455 1.8193002812679622 1.0 13.372080517696078 -7.5211476817877605 24.96586274534948 1.4692078816471532 1.2337820173579082 0.03811488225259929 0.3602525958640337 203.34810495183447 2933005.176270433 0.23267780088695356 0.09081969572063428 3.0119816260232154e-08 7.5211476817877605 -0.23542586428924506 HTPSPGLPAEGAPEAPRPS(ph)SPPPEVLEPHSLDQPPATSPR ddPTM_KYSE-520_SHP099_60min_R1 4 HTPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPR 40 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HTPS(0.006)PGLPAEGAPEAPRPS(0.497)S(0.497)PPPEVLEPHSLDQPPATSPR;HTPSPGLPAEGAPEAPRPS(0.5)S(0.5)PPPEVLEPHSLDQPPATSPR;HTPSPGLPAEGAPEAPRPS(0.5)S(0.5)PPPEVLEPHSLDQPPATSPR;HTPSPGLPAEGAPEAPRPS(0.498)S(0.498)PPPEVLEPHS(0.003)LDQPPAT(0.001)S(0.001)PR 249.92 6.460099999999999e-32 4857690000.0 932486.0 1013763.0 792835.0 739642.0 699899.0 944782.0 736620.0 757830.0 948732.0 835707.0 True False 880759.1427152443 965060.3037907144 843942.4126808518 809937.3532985237 754977.0694194305 938885.265088912 811084.7383184107 755201.2646088513 776466.1843874617 828303.2861502069 1.0633292870403086 1.1651050043229063 1.018880918127625 0.9778270433562511 0.9114741931405554 1.133504213719432 0.9792122666664469 0.9117448611352013 0.9374177277459879 1.0 19.659799586738668 -4.928404412690125 5.169064422517359 0.9799558200855546 1.1130011263171131 0.41359366401606545 0.06358492144369629 0.19485564427086624 9.594633842407122 0.017416212688900243 0.03743226684401841 1.1792220389951656e-05 4.928404412690125 0.13304530623155852 HTPSPGLPAEGAPEAPRPS(ph)SPPPEVLEPHSLDQPPATSPRPLIEVGELLDLTR ddPTM_KYSE-520_SHP099_60min_R1 3 HTPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPRPLIEVGELLDLTR 53 2 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HTPSPGLPAEGAPEAPRPS(0.5)S(0.5)PPPEVLEPHSLDQPPATSPRPLIEVGELLDLTR;HTPSPGLPAEGAPEAPRPS(0.5)S(0.5)PPPEVLEPHSLDQPPATSPRPLIEVGELLDLTR;HTPSPGLPAEGAPEAPRPS(0.5)S(0.5)PPPEVLEPHSLDQPPATSPRPLIEVGELLDLTR 177.83 5.0104e-14 2097100000.0 58373.0 75899.0 73986.0 75475.0 52416.0 54254.0 32792.3 52013.0 80146.0 47300.0 True False 55134.93332630943 72252.6981132783 78755.25594178561 82648.12130761374 56540.8409937561 53915.38066150055 36107.26570600687 51832.57904292547 65593.506716246 46880.958798843145 1.1760624086824343 1.541194974772172 1.679898576300641 1.762935814991335 1.2060512933696939 1.1500485920699854 0.7701904276517882 1.105621138537903 1.399150281838191 1.0 15.516714455286383 -5.925475220523518 5.539533303863331 1.0823363091555505 1.5486039098268407 0.5294012030761925 0.20320374400938135 0.1678342963276127 9.088509923654522 0.06729352418667826 0.0764388418372181 1.1872024371463026e-06 5.925475220523518 0.46626760067129025 HTPSPGLPAEGAPEAPRPSS(ph)PPPEVLEPHSLDQPPAT(ph)SPRPLIEVGELLDLTR ddPTM_KYSE-520_SHP099_60min_R1 2 HTPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPRPLIEVGELLDLTR 53 2 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 HTPSPGLPAEGAPEAPRPS(0.471)S(0.529)PPPEVLEPHS(0.001)LDQPPAT(0.819)S(0.179)PRPLIEVGELLDLTR;HTPSPGLPAEGAPEAPRPS(0.475)S(0.509)PPPEVLEPHS(0.203)LDQPPAT(0.42)S(0.392)PRPLIEVGELLDLTR 166.78 1.7593e-13 2051790000.0 53406.0 108491.0 61789.9 96136.0 65043.0 67494.0 69170.0 85493.0 112457.0 61869.0 True False 50443.462717778464 103278.92951168898 65772.97582133545 105272.73653565762 70161.51405595391 67072.74491037191 76162.37863414566 85196.44473721628 92037.64361027216 61320.88879335362 0.822614670308658 1.6842373217995996 1.0726031066344293 1.7167516421756073 1.1441698813660788 1.093799294664524 1.2420299205187102 1.389354368693535 1.5009182909991976 1.0 15.90409098731703 HTPSPGLPAEGAPEAPRPSS(ph)PPPEVLEPHSLDQPPATSPR ddPTM_KYSE-520_SHP099_60min_R1 3 HTPSPGLPAEGAPEAPRPSSPPPEVLEPHSLDQPPATSPR 40 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 HTPSPGLPAEGAPEAPRPS(0.433)S(0.567)PPPEVLEPHSLDQPPATSPR;HTPSPGLPAEGAPEAPRPS(0.184)S(0.816)PPPEVLEPHSLDQPPATSPR;HTPSPGLPAEGAPEAPRPS(0.406)S(0.594)PPPEVLEPHSLDQPPATSPR 233.67 2.1634e-31 5586080000.0 205209.0 255105.0 269481.0 228228.0 193480.0 281762.0 166187.0 256390.0 299361.0 208012.0 True False 193825.64769600026 242849.3728795882 286852.17644484487 249918.72050074983 208705.77524938833 280003.4188436931 182986.80378882142 255500.64293187571 245004.5886766917 206169.17551088717 0.9401291304371778 1.177913101111296 1.3913436658706386 1.212202163012251 1.0123034868438285 1.3581245506261772 0.8875565580324031 1.2392766391908256 1.1883667287778126 1.0 17.653469124980806 -6.7449848791672915 24.999985601177148 1.0987395545067231 1.1849913154865033 0.08885625157592658 0.1566068567986553 756.8083320726215 1149849.1940359427 0.06032825761889075 0.04659155034890082 1.798933547514944e-07 6.7449848791672915 0.08625176097978016 HTVLYIS(ph)PPPEDLLDNSR ddPTM_KYSE-520_SHP099_60min_R1 6 HTVLYISPPPEDLLDNSR 18 0 O94916-2;O94916;O94916-4;O94916-5 O94916-2 NFAT5 Nuclear factor of activated T-cells 5 1 HTVLYIS(1)PPPEDLLDNSR;HTVLYIS(1)PPPEDLLDNSR;HTVLYIS(1)PPPEDLLDNSR;HTVLYIS(1)PPPEDLLDNSR;HTVLYIS(1)PPPEDLLDNSR;HTVLYIS(1)PPPEDLLDNSR 252.47 2.3414e-24 2362140000.0 909590.0 899860.0 810450.0 771140.0 798817.0 873730.0 753768.0 851860.0 1031430.0 777054.0 True False 859133.2294772887 856629.3748826028 862692.9037658481 844428.9137483058 861679.353253 868276.7269763136 829966.225506762 848905.0964856178 844148.312234393 770169.9060988633 1.1155112952011468 1.112260253353292 1.1201332289593617 1.0964189941224607 1.1188172199789768 1.127383347623111 1.0776404257481114 1.1022309360093947 1.0960546569655674 1.0 19.55481722627834 -13.999998723740529 0.23794578521512671 0.38651041405823033 1.1186373634196927 0.8799135441879001 0.012163797944238742 52.81692637450488 0.5277329266822044 15.629039906053862 0.019664831743123758 1.0000029387003518e-14 13.999998723740529 0.7321269493614624 HVAEDLGK ddPTM_KYSE-520_SHP099_60min_R1 2 HVAEDLGK 8 0 A0A2R8Y4F5;H0YFD6;P40939 A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase 0 ; 106.36 0.0017294 0.0 291680.0 326920.0 198712.0 198839.0 295960.0 325240.0 252510.0 290410.0 295460.0 279740.0 False True 275499.9289503353 311214.272483076 211521.29347044128 217736.59877687477 319250.3682179498 323210.0565183474 278036.1750601147 289402.6354922036 241811.91194048416 277261.72123442666 0.993645742815678 1.12245668495992 0.762893963612087 0.7853107086238458 1.1514404757951475 1.165721885730743 1.002793223032159 1.0437886420228621 0.8721431536379685 1.0 18.080888926020684 HVDWVK ddPTM_KYSE-520_SHP099_60min_R1 2 HVDWVK 6 0 E9PDI2;P40123;F8WDB9;Q01518-2;Q01518;Q5T0R4;Q5T0R3;Q5T0R2;Q5T0R1;Q5T0R9 E9PDI2;Q01518-2 CAP2;CAP1 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2;Adenylyl cyclase-associated protein 1 0 ; 121.68 0.013615 1155720000.0 3796200.0 2798700.0 1760030.0 1702690.0 2772600.0 2808300.0 2030650.0 2221200.0 1916310.0 2351200.0 False True 3585617.218462915 2664246.251065658 1873484.3499475683 1864513.1456675837 2990787.846063955 2790772.3580140043 2235927.9192341776 2213495.175631977 1568356.4102439226 2330370.197205918 1.5386470453329781 1.1432716802935659 0.8039428036772228 0.800093113061225 1.2833960242239062 1.1975661040293522 0.9594732724933681 0.9498470149875448 0.6730074097773652 1.0 21.15212772559832 -4.347854371194916 3.2168266921032194 0.9711038686077716 1.5717077044813097 0.5062071383461573 0.17317040991658975 0.2512288121571118 4.188538431504068 0.04774012321380824 0.32915597951594056 4.488958896875244e-05 4.347854371194916 0.600603835873538 HVEEFSPR ddPTM_KYSE-520_SHP099_60min_R1 1 HVEEFSPR 8 0 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 0 150.4 0.00198 0.0 307070.0 297890.0 198180.0 191460.0 303260.0 282380.0 219590.0 224330.0 256070.0 237290.0 False True 290036.2149711312 283578.91725799383 210954.99989921157 209656.30083545187 327124.8366866318 280617.56167645776 241788.30019187558 223551.8515890156 209574.14299939005 235187.79520882628 1.2332111652035527 1.2057552434053835 0.8969640610470535 0.891442094813191 1.3909090665022537 1.1931637924803615 1.0280648278418896 0.9505248832768768 0.8910927661586625 1.0 17.843453669608703 -7.015254171743324 3.8235389707193117 0.9444724987448387 1.1278819867866705 0.2577284547439347 0.14363614803453167 0.3634229990950431 11.685487420268291 0.07575171305121652 0.04484524697790657 9.654856611294209e-08 7.015254171743324 0.18340948804183177 HVEVSQAPLPPAPAYLS(ph)SPLALPSQR ddPTM_KYSE-520_SHP099_60min_R1 1 HVEVSQAPLPPAPAYLSSPLALPSQR 26 0 A0A087X0G7;A0A087WUW6;A0A087X1B1;Q9Y6K9-3;Q9Y6K9;Q9Y6K9-2 A0A087X0G7 IKBKG NF-kappa-B essential modulator 1 HVEVSQAPLPPAPAYLS(0.5)S(0.5)PLALPSQR 140.94 1.23e-06 223600000.0 291500.0 303820.0 267920.0 264410.0 269410.0 315650.0 218870.0 285090.0 330060.0 279540.0 True False 275329.91390915634 289224.0311568825 285190.55188715673 289539.4469022349 290611.03426678566 313679.9112655775 240995.5155653532 284101.08933050645 270129.42413550447 277063.49307882896 0.9937430256494334 1.0438907989750699 1.029332838902798 1.0450292230303195 1.0488968829397607 1.1321589422693468 0.8698205342296257 1.0254006624022285 0.9749729967442818 1.0 18.07985710288924 -6.754550783946864 24.999635110399748 0.9696652693758779 1.047559295274964 0.3932280128155835 0.04942767323552088 174.62632951026092 633744.6941677002 0.0187928745164371 0.014225824047628203 1.759742877364561e-07 6.754550783946864 0.077894025899086 HVEVSQAPLPPAPAYLSS(ph)PLALPSQR ddPTM_KYSE-520_SHP099_60min_R1 1 HVEVSQAPLPPAPAYLSSPLALPSQR 26 0 A0A087X0G7;A0A087WUW6;A0A087X1B1;Q9Y6K9-3;Q9Y6K9;Q9Y6K9-2 A0A087X0G7 IKBKG NF-kappa-B essential modulator 1 HVEVSQAPLPPAPAY(0.001)LS(0.097)S(0.903)PLALPSQR 115.32 0.00023928 235530000.0 294640.0 320210.0 270520.0 262110.0 210020.0 269400.0 236150.0 259620.0 298190.0 283530.0 True False 278295.73184972204 304826.63095499104 287958.15204730374 287020.85559375474 226547.37914966152 267718.57467114425 260022.3466019011 258719.43881576337 244046.2127581838 281018.1447830024 0.9903123233007515 1.084722238097377 1.0246959400776783 1.0213605808813078 0.8061663752160833 0.9526736249642248 0.9252866814087258 0.9206502982771532 0.868435783556369 1.0 18.10030375984147 -5.604107835856614 10.86361699940701 0.9109530436065573 1.0358354193601682 0.5508199507117741 0.05229253322599374 0.30035931743077277 38.22028696105942 0.014661031262135953 0.01892847573632484 2.4882394086512455e-06 5.604107835856614 0.12488237575361094 HVFGESDELIGQK ddPTM_KYSE-520_SHP099_60min_R1 2 HVFGESDELIGQK 13 0 P60174;P60174-3;P60174-4;U3KPZ0;U3KQF3;U3KPS5 P60174 TPI1 Triosephosphate isomerase 0 ; 183.08 6.5557e-08 2932300000.0 4901800.0 6338500.0 4161200.0 6917000.0 6072900.0 5281800.0 4211900.0 4382500.0 4751100.0 4648500.0 False True 4629887.382503961 6033988.945717538 4429437.610155411 7574389.600328126 6550802.679925627 5248834.327015764 4637679.956182714 4367298.130383189 3888420.0054844515 4607317.906478276 1.004898614873949 1.309653266433654 0.961391790205588 1.6439910928824553 1.4218256289010682 1.1392385838267125 1.0065899619519951 0.9479046636313941 0.8439660740616589 1.0 22.135495717141723 -6.6979696234392305 2.6881023395972385 0.9337290391808538 1.2742009827459977 0.3935048779921393 0.18639505864347317 0.2921548415956984 4.29807513205377 0.08586948617904727 0.06037052147517033 2.0046122342947093e-07 6.6979696234392305 0.3404719435651439 HVFGQAVK ddPTM_KYSE-520_SHP099_60min_R1 1 HVFGQAVK 8 0 Q9ULV4-3;Q9ULV4;Q9ULV4-2;F8VRE9;F8VTT6;F8VVB7;F8VUX3;F8W1H8;F8VSA4 Q9ULV4-3 CORO1C Coronin-1C;Coronin 0 128.57 0.0006582000000000001 0.0 498090.0 402430.0 324530.0 283300.0 468310.0 416910.0 326800.0 382720.0 354650.0 349690.0 False True 470459.9547822015 383096.65874025534 345449.7230663594 310224.74682274915 505163.33268059185 414307.91004508745 359836.13326064503 381392.43364751973 290254.4999989604 346592.0186547034 1.357388310926176 1.1053245260154712 0.9967042068863046 0.8950718139064086 1.4575157692360685 1.1953763726389985 1.0382124050558021 1.1004074332925904 0.8374529255624032 1.0 18.4028789068349 -7.444901090257372 1.9463392336798158 0.9294913840741288 1.1506432868612886 0.22899063070527992 0.1615695060285103 0.5840852190582545 4.004682160440635 0.1397380858595333 0.048204669097761624 3.590036877424867e-08 7.444901090257372 0.2211519027871598 HVHQYHEDKDSGK ddPTM_KYSE-520_SHP099_60min_R1 5 HVHQYHEDKDSGK 13 1 Q96DZ1-2;Q96DZ1-3;Q96DZ1 Q96DZ1-2 ERLEC1 Endoplasmic reticulum lectin 1 0 ;;;; 227.63 2.9948e-11 7266380000.0 6870340.0 7800820.0 3945030.0 5085800.0 2685290.0 5964170.0 3473860.0 5050110.0 4490250.0 2521390.0 False True 6489228.54451675 7426056.897930471 4199332.946071179 5569152.902898476 2896607.045789896 5926945.402733475 3825031.67040644 5032592.347114538 3674933.7899910663 2499052.446211736 2.5966756137325735 2.971549040192207 1.6803700748405115 2.228505812809429 1.159082135383275 2.371677077733208 1.5305927957633418 2.013800212453862 1.4705308788384275 1.0 21.25294974809798 -1.0000000000000002 0.20507456677626937 1.2649688454519177 8.67405154662128 0.49820258541995666 0.43117797365640775 44.71129517236892 0.5481813615436791 0.7377806247734895 107.3062841750686 0.09999999999999995 1.0000000000000002 7.409082701169362 HVIARGHAFVLVY(ph)SVTK ddPTM_KYSE-520_SHP099_60min_R1 1 HVIARGHAFVLVYSVTK 17 1 O95661 O95661 DIRAS3 GTP-binding protein Di-Ras3 1 HVIARGHAFVLVY(0.97)S(0.03)VTK 68.919 0.016007 520740000.0 654030.0 672090.0 555970.0 618380.0 696540.0 629160.0 709570.0 699140.0 825390.0 661320.0 True False 617749.6521235178 639801.7875723423 591808.7157834519 677150.649277274 751353.7352295276 625233.1790649478 781300.2603358495 696714.8465205034 675519.9823886692 655461.2192991745 0.9424656012204989 0.9761092933254306 0.9028889861954298 1.0330903329434045 1.1462977718695277 0.9538827937577347 1.1919854864506298 1.062938318861088 1.0306025169741417 1.0 19.322150899613288 -5.43312989537464 5.344383094265088 1.070072598011228 0.9453909324323011 0.41078054284472554 0.06599627167616287 0.2091057639440796 9.536166957380743 0.018023706307655454 0.026819271222606404 3.6886725566108055e-06 5.43312989537464 -0.1246816655789269 HVIDFFK ddPTM_KYSE-520_SHP099_60min_R1 2 HVIDFFK 7 0 Q9NTZ6 Q9NTZ6 RBM12 RNA-binding protein 12 0 ; 117.16 0.0045265 775780000.0 2395200.0 2085300.0 1417740.0 1263610.0 2221900.0 2201800.0 1518460.0 1583790.0 1663390.0 1734020.0 False True 2262333.4812871763 1985119.0579008863 1509129.788864203 1383703.1144818 2396750.8891183385 2188057.749483757 1671960.7555414885 1578296.202149366 1361360.306649571 1718657.9318471458 1.3163372648888365 1.1550402329143872 0.878086186261771 0.8051067573374828 1.3945479462236008 1.2731199786406122 0.9728292783337816 0.9183306188527437 0.7921066091298544 1.0 20.712851000041432 -6.9624648449173066 8.437487633017197 0.9019660986218622 1.1230661766897612 0.26514725966333097 0.1782328462535508 0.3987112913062032 80.65695070875086 0.0824992457646689 0.055288455641228945 1.0902727437417507e-07 6.9624648449173066 0.221100078067899 HVINFDLPSDIEEYVHR ddPTM_KYSE-520_SHP099_60min_R1 3 HVINFDLPSDIEEYVHR 17 0 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;A0A2R8Y7T2;O15523-2;O15523;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A0D9SG12;A0A2R8Y5G6 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 0 ;; 256.45 7.1649e-25 443698000.0 296100.0 286312.0 223589.0 263746.0 307051.0 274635.0 255338.0 218430.0 224488.0 176492.0 False True 279674.7427392836 272557.1417569267 238001.9046950488 288812.34054187353 331214.1668187924 272920.9010943191 281150.05689873465 217672.31731194508 183726.6380819584 174928.41818869827 1.598795356610346 1.5581067077558244 1.360567408997617 1.6510315678400906 1.8934268671057555 1.5601861831272874 1.6072291729949406 1.244350801121052 1.0502961153159764 1.0 17.41640515734689 -7.454915596996398 2.234625304578238 1.0152478590715825 1.60834458575717 0.7885952563741102 0.12339331996718511 0.15744343489001433 1.4518765689760313 0.1085728926850148 0.03798175755567701 3.5082004748423056e-08 7.454915596996398 0.5930967266855875 HVIPMNPNTDDLFK ddPTM_KYSE-520_SHP099_60min_R1 1 HVIPMNPNTDDLFK 14 0 P13797;A0A0A0MSQ0;P13797-3;P13797-2;U3KQI3 P13797 PLS3 Plastin-3 0 186.56 3.2240999999999997e-09 0.0 520220.0 398670.0 246810.0 285590.0 437530.0 456380.0 332760.0 377220.0 353430.0 376940.0 False True 491362.3595671409 379517.29478412983 262719.7675099622 312732.38773423544 471961.1217948352 453531.56313443516 366398.6282246398 375911.5118638094 289256.02124526305 373600.6048548822 1.315207612573328 1.0158369388388595 0.7032102306472725 0.8370767704075591 1.263277188692345 1.2139476147545334 0.9807227918353081 1.006185501251597 0.7742386320750708 1.0 18.511137265192183 -7.587782805495576 9.14324568962798 0.8869159269747261 1.036040776504143 0.10264968634543092 0.1845379377863102 0.886882659805295 115.19099336037252 0.13527811221312666 0.05085216024964455 2.583551924729447e-08 7.587782805495576 0.14912484952941696 HVKDEQIEHWK ddPTM_KYSE-520_SHP099_60min_R1 2 HVKDEQIEHWK 11 1 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 0 ; 227.31 1.1677e-09 841230000.0 926700.0 819460.0 752770.0 764160.0 860070.0 883990.0 780690.0 872000.0 926140.0 612160.0 False True 875294.1036693505 780091.9115654634 801294.7586745847 836785.5366469175 927752.6158711056 878472.6905105578 859609.7640001619 868975.2355263303 757976.3220894873 606736.7386532736 1.442625850566051 1.285717283738204 1.3206629953761437 1.3791575214388128 1.5290859392005272 1.4478646743238848 1.4167755292158029 1.4322113367572353 1.2492672254723005 1.0 19.21071114540574 -9.731966111786967 8.005200953750608 0.9999997592353795 1.3918111866702545 0.6817936912569329 0.07976261607710498 6.224231465236209e-11 0.0 0.08130105978459351 0.019718403350972667 1.853676261046323e-10 9.731966111786967 0.39181142743487496 HVLFPLK ddPTM_KYSE-520_SHP099_60min_R1 2 HVLFPLK 7 0 A0A0C4DGZ5;P54577 A0A0C4DGZ5 YARS Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed 0 ; 106.75 0.0062131999999999995 351650000.0 730570.0 655950.0 520390.0 451660.0 817900.0 706380.0 506850.0 526320.0 557670.0 542580.0 False True 690043.8257448116 624437.177398977 553935.1720534388 494585.63060346904 882264.0767855828 701971.2204016427 558087.3443793084 524494.3187640117 456411.18571667816 537773.1633208519 1.2831503555953951 1.16115347508782 1.030053579901205 0.9196919153594583 1.6405877737323928 1.3053295855576663 1.0377746277501327 0.9753077218006925 0.8487057682429745 1.0 19.03663823613707 -6.954641212523825 4.255014969109264 0.9438031068827164 1.2161873742929379 0.3324739162062168 0.18224938660885656 0.2816538549793047 10.999651682864366 0.08903434896211469 0.05675225001479233 1.1100915261089273e-07 6.954641212523825 0.2723842674102215 HVLQTAVADS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 HVLQTAVADSPR 12 0 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 1 HVLQTAVADS(1)PR 141.58 2.217e-05 475930000.0 459750.0 395080.0 311710.0 390700.0 353810.0 375770.0 336560.0 328110.0 478820.0 393990.0 True False 434246.75101109734 376099.7637728298 331803.3253536343 427832.01053176133 381652.83409647533 373424.68004519615 370582.76930906565 326971.86299144936 391878.35806993424 390499.5551195815 1.112028798286644 0.9631246920567115 0.8496893812133208 1.0956017873074084 0.9773451188173644 0.9562742777795058 0.9489966491654086 0.8373168642697217 1.0035308694524132 1.0 18.574961379200637 -6.388741790859211 2.6278880930653377 0.9352613832519948 0.9947881503540167 0.08215717895813601 0.08049240706551276 0.7249068438048927 9.74835759874187 0.03196493748211209 0.027308611749711945 4.0856222420118745e-07 6.388741790859211 0.05952676710202187 HVLVTLGEK ddPTM_KYSE-520_SHP099_60min_R1 2 HVLVTLGEK 9 0 G8JLA2;P60660-2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;F8VZU9;G3V1Y7;F8VPF3;F8W180;F8VXL3;H0YI43 G8JLA2 MYL6 Myosin light polypeptide 6 0 ; 105.4 0.0027671999999999996 1074810000.0 3909000.0 4309100.0 2931200.0 3015100.0 4438100.0 4490400.0 3421500.0 4389100.0 4367400.0 3929200.0 False True 3692159.9776016907 4102084.3679090342 3120149.8420858234 3301654.197477128 4787353.220665236 4462373.74797069 3767378.61062208 4373875.2365236385 3574390.2531945794 3894390.344871342 0.9480713669249987 1.0533315884246712 0.8011908323968749 0.8477974484055485 1.229294651207696 1.1458465517837328 0.9673859775210956 1.1231219393001388 0.9178305040484239 1.0 21.892966065705508 -5.737262623767907 24.999995672924634 1.069339762603667 0.9146925764424015 0.3319838609118917 0.10496744125020832 283.8684655354202 293533.068036845 0.03196501153105683 0.04124503735400151 1.831206731921391e-06 5.737262623767907 -0.15464718616126538 HVPDS(ph)GATATAYLCGVK ddPTM_KYSE-520_SHP099_60min_R1 1 HVPDSGATATAYLCGVK 17 0 P10696;P05187 P10696 ALPPL2;ALPP Alkaline phosphatase, placental-like;Alkaline phosphatase, placental type 1 HVPDS(1)GATATAYLCGVK 216.99 4.5887e-18 400380000.0 99963.0 114760.0 101060.0 171330.0 108410.0 76255.0 97387.0 122480.0 156680.0 101870.0 True False 94417.85311869992 109246.75734172821 107574.48930171704 187613.15168775705 116941.25023147697 75779.06425964406 107231.82836552773 122055.14546704703 128230.86158138182 100967.51105366068 0.9351310350566149 1.0819991124042605 1.0654366754127966 1.8581536746810294 1.1582067242335685 0.7505291897249022 1.0620429011916297 1.2088556427045034 1.2700210220417498 1.0 16.623531617096564 -6.001594287407228 24.999977137653328 1.0585544624645842 1.2491222836131928 0.09029580614073351 0.2639714397465433 163.2007976926957 2559218.681649546 0.08837562061649056 0.09881039725710872 9.963357474005918e-07 6.001594287407228 0.1905678211486086 HVS(ph)PVTPPR ddPTM_KYSE-520_SHP099_60min_R1 1 HVSPVTPPR 9 0 Q13443 Q13443 ADAM9 Disintegrin and metalloproteinase domain-containing protein 9 1 HVS(1)PVTPPR 122.69 0.004167199999999999 0.0 79273.0 97434.0 76658.0 83236.0 91039.0 86302.0 89452.0 98602.0 125300.0 77406.0 True False 74875.56866319235 92753.12438858445 81599.49733713665 91146.72441418396 98203.251358947 85763.35720589854 98494.68112739039 98259.97267587992 102548.67855595562 76720.24306095665 0.9759558322006533 1.2089785001709283 1.0635980033627277 1.1880400892599494 1.2800174691954693 1.1178712916453726 1.2838160724951466 1.2807567958017192 1.3366573731326354 1.0 16.227319670581736 -2.8209067001359647 0.5648446287348636 1.2308630167216597 2.381112978097975e-12 0.27187947678496316 0.10360092449315758 21.690979687793043 1.476070673302482 0.048965015117789744 25.042568030700252 0.0015104046008559936 2.8209067001359647 -1.2308630167192784 HVTLPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 3 HVTLPSSPR 9 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;X6RE05 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 HVTLPS(0.595)S(0.405)PR;HVTLPS(0.595)S(0.405)PR;HVTLPS(0.67)S(0.33)PR 128.85 0.00039898 4648100000.0 1823410.0 2657080.0 2538650.0 4981400.0 2222040.0 2158330.0 2119800.0 1706970.0 2497690.0 2020530.0 True False 1722261.81242228 2529429.8884416064 2702295.4409836167 5454830.758287482 2396901.906321844 2144859.0618781387 2334090.071254331 1701048.9194797927 2044172.45764106 2002629.676148551 0.8600001452762482 1.2630542324261345 1.3493735128207327 2.7238339785207764 1.1968772533779464 1.0710213113405582 1.1655125753170918 0.8494076262523198 1.0207441155932553 1.0 20.933464233720564 -5.985648943833823 24.999044427185233 1.0334928286620775 1.570120153314791 0.23361136937283344 0.4508163525091664 371.5689660776055 647256.7344927922 0.14798494172160032 0.16772971702235628 1.033596562201222e-06 5.985648943833823 0.5366273246527136 HVTLPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 HVTLPSSPR 9 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;X6RE05 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 HVTLPS(0.152)S(0.848)PR;HVTLPS(0.404)S(0.596)PR;HVTLPSS(1)PR;HVTLPS(0.065)S(0.935)PR;HVTLPS(0.336)S(0.664)PR;HVTLPS(0.483)S(0.517)PR;HVTLPS(0.206)S(0.794)PR 185.99 6.1252e-06 12584420000.0 9296910.0 13768760.0 12844190.0 25689930.0 10954380.0 10781920.0 10534780.0 9151340.0 11603030.0 9544910.0 True False 8781191.869369382 13107288.102269892 13672147.038830625 28131493.223240934 11816427.384103747 10714626.037929855 11599738.37194485 9119596.137478804 9496212.240583496 9460349.523227617 0.9282100886240274 1.3854972345459429 1.445205275477608 2.973620916877416 1.2490476546444025 1.1325824708297154 1.2261426856866628 0.9639808883474997 1.0037908448591488 1.0 23.173462055860504 -5.98218661660159 24.99968665892601 1.0861798445208455 1.7031855931477637 0.2593418396802535 0.4932507455977981 358.1405704384216 502619.69326909236 0.1610457011942765 0.1825761175854831 1.0418696411776927e-06 5.98218661660159 0.6170057486269183 HVVFGK ddPTM_KYSE-520_SHP099_60min_R1 2 HVVFGK 6 0 P62937;P62937-2;O43447;C9JQD4;H0YEL5;O43447-2;P45877;P23284 P62937;P23284 PPIA;PPIH;PPIC;PPIB Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase H;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase C;Peptidyl-prolyl cis-trans isomerase B 0 ; 118.11 0.014131 4000100000.0 11728000.0 10153200.0 7741200.0 6869200.0 10655500.0 10572900.0 7833000.0 9272100.0 9154500.0 8548100.0 False True 11077424.46081163 9665425.031736096 8240210.138357928 7522046.7026997125 11494027.22849832 10506910.609281886 8624836.082713077 9239937.24922441 7492273.566165174 8472370.484321177 1.3074764000596197 1.140817088868194 0.972597946891855 0.8878325985177209 1.356648325255484 1.2401382386105275 1.0179956245626947 1.0905964589631294 0.8843184537350257 1.0 23.01433424696962 -7.408622528755882 1.8909042326647094 0.9534066757348408 1.1341705686980448 0.21078719080227137 0.14151860442012548 0.654166195601517 4.229368856517971 0.12382527122355264 0.043781890080458845 3.9028105585228074e-08 7.408622528755882 0.18076389296320394 HVVLGAIENKVES(ph)K ddPTM_KYSE-520_SHP099_60min_R1 5 HVVLGAIENKVESK 14 1 P41227-2;P41227 P41227-2 NAA10 N-alpha-acetyltransferase 10 1 HVVLGAIENKVES(1)K;HVVLGAIENKVES(1)K;HVVLGAIENKVES(1)K;HVVLGAIENKVES(1)K;HVVLGAIENKVES(1)K 270.42 4.0749000000000006e-25 4156600000.0 5700540.0 5271650.0 4528850.0 5004430.0 4882680.0 4883180.0 4274230.0 4670730.0 5715230.0 4562070.0 True False 5384319.682455248 5018392.021092024 4820786.917416208 5480049.522563256 5266919.137351059 4852702.262296348 4706310.880864892 4654528.327786581 4677488.301223901 4521653.609036753 1.1907855284832995 1.1098576881392492 1.0661557328897602 1.2119569512381712 1.1648214553244096 1.0732140676583402 1.0408384382782203 1.0293863109027792 1.0344640933740932 1.0 22.108419044901876 -6.493874365491473 2.947248954077937 1.0288305487108558 1.1451405728853987 0.6821363247367015 0.03950707371049266 0.1760640326354941 3.0834391663513556 0.016742575491803944 0.013522495286594197 3.207196981562228e-07 6.493874365491473 0.11631002417454295 HWDQNER ddPTM_KYSE-520_SHP099_60min_R1 3 HWDQNER 7 0 F5GZI0;F5GZS6;J3KPF3;P08195-2;P08195-3;P08195;P08195-4 F5GZI0 SLC3A2 4F2 cell-surface antigen heavy chain 0 ;; 134.81 0.0037759 796830000.0 426370.0 405950.0 361630.0 404100.0 460860.0 452410.0 400929.0 461060.0 455870.0 336830.0 False True 402718.4061524775 386447.5526566269 384941.2484284577 442505.54250290466 497127.06006529357 449586.341377031 441458.81600996654 459460.69047221326 373095.499547514 333845.94824977446 1.2063001161576912 1.1575625065471735 1.1530505325781433 1.3254782477450768 1.4890911891294143 1.346688027019764 1.3223428899597698 1.3762655886075252 1.1175678527881192 1.0 18.34882300538081 -3.3250610937983995 14.1164949515144 1.2681533287000484 1.2400490340149772 0.0 0.1402779916506732 0.0 0.0 0.032793319335292684 0.0 0.00047308470371906325 3.3250610937983995 -0.02810429468507114 HWGAGWDGGHHYPEMDAR ddPTM_KYSE-520_SHP099_60min_R1 2 HWGAGWDGGHHYPEMDAR 18 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 0 ; 269.91 2.7638999999999996e-30 1284520000.0 402830.0 466220.0 423560.0 446100.0 474500.0 357100.0 430750.0 399560.0 488750.0 238950.0 False True 380484.21687830397 443822.0913895129 450863.35531996115 488497.20987514406 511840.4504643096 354871.20644048066 474294.41371488065 398174.01961800514 400005.32038486324 236833.08890028685 1.6065500756040814 1.873986837947184 1.9037177508155831 2.0626222971774633 2.161186398577136 1.4984021366621243 2.0026526526222503 1.6812431973373754 1.6889756504982136 1.0 17.853511134193454 -8.61357779600155 0.707847368151496 0.9829516075693486 1.8909378208074548 0.6461558132479599 0.19039136544460022 1.3223847087420322 1.009620288595843 0.23839237241196998 0.07103064497010593 2.434569651768978e-09 8.61357779600155 0.9079862132381061 HWGGNVLGPK ddPTM_KYSE-520_SHP099_60min_R1 3 HWGGNVLGPK 10 0 P62424;Q5T8U2 P62424 RPL7A 60S ribosomal protein L7a 0 ;; 100.02 0.0036333 3435390000.0 12211580.0 10580210.0 7959050.0 7124120.0 11369950.0 10800270.0 8529380.0 9445270.0 9044670.0 8869790.0 False True 11534179.314218806 10071920.830381026 8472103.097930267 7801194.2228552215 12264700.378833903 10732861.50877327 9391612.969126929 9412506.562912602 7402385.925576178 8791210.561192203 1.3120126328375212 1.1456807637895028 0.9637015333621288 0.8873856641874447 1.3951093872071527 1.2208627508198089 1.0682957601522063 1.0706724059668231 0.8420212295054298 1.0 23.067630409366064 -7.503126964623653 2.6493699287031967 0.9244128470380185 1.1387092783917403 0.2536568022497968 0.14713036166627547 0.442837423423749 5.919439905465828 0.12311612878495436 0.042751939438763854 3.139590710244266e-08 7.503126964623653 0.21429643135372178 HWILPQDYDHAQAEAR ddPTM_KYSE-520_SHP099_60min_R1 3 HWILPQDYDHAQAEAR 16 0 Q15293;Q15293-2 Q15293 RCN1 Reticulocalbin-1 0 ;; 188.44 4.5801e-12 4309420000.0 2502280.0 2020030.0 1476890.0 1479030.0 2202110.0 1887490.0 1639990.0 1630720.0 1836970.0 1534330.0 False True 2363473.5402284865 1922984.7266731528 1572092.69250755 1619596.5665134147 2375403.528708032 1875709.4747811356 1805776.1939599924 1625063.4129329103 1503422.5542452848 1520737.0298906763 1.554163207558899 1.2645083856552066 1.033770245353048 1.0650076473970291 1.5620080803048482 1.2334213200003277 1.1874348808944353 1.0686025137756616 0.9886144183346175 1.0 20.536339269084184 -7.219692792611832 1.8837061520736023 0.9973078506784693 1.2745373547148113 0.3531785882131555 0.16275759141900964 0.47134934158682934 3.1230165111143324 0.12423962289412792 0.0517878861498872 6.029859701312919e-08 7.219692792611832 0.27722950403634206 HWMLDK ddPTM_KYSE-520_SHP099_60min_R1 4 HWMLDK 6 0 P62701;C9JEH7;P22090;Q8TD47 P62701 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 0 ;;; 118.06 0.01414 18381930000.0 38406900.0 34689500.0 22026000.0 20748000.0 34057200.0 32742600.0 24949800.0 27574700.0 26145700.0 26601700.0 False True 36276392.694743 33022964.349998955 23445831.20284607 22719883.68188633 36737307.881039195 32538241.288149215 27471969.27058272 27479049.801683363 21398299.95946089 26366029.633809432 1.3758762012550196 1.2524815001972562 0.8892439069696424 0.8617104659835619 1.3933576041320443 1.2340971219430434 1.0419456267072966 1.0422141741981013 0.8115859784979392 1.0 24.65217700147872 -7.303155299351944 2.1300087605772755 0.9171227600119484 1.1517376209725607 0.2369134445729938 0.17548121698337246 0.5631999853378671 4.785817741967781 0.13772636015581752 0.05486823976340058 4.9755913100746146e-08 7.303155299351944 0.23461486096061235 HWPFMVVNDAGR ddPTM_KYSE-520_SHP099_60min_R1 2 HWPFMVVNDAGR 12 0 E9PKE3;P11142;E9PNE6;P11142-2;E9PN89;E9PLF4;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PN25 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ; 158.42 7.4722e-06 1630120000.0 1183100.0 1031340.0 698760.0 776230.0 1294140.0 1168980.0 904380.0 845410.0 794630.0 849100.0 False True 1117471.0845486214 981792.8783270988 743803.1876555297 850002.6658179406 1395981.4553506477 1161683.9622088857 995803.5562982307 842477.4700301782 650345.2229921711 841577.6345898035 1.327828875934057 1.1666099929160285 0.8838200506814438 1.0100109970629667 1.6587672936805982 1.3803645848729171 1.1832581040293435 1.001069224517609 0.7727691377030929 1.0 19.682736839125102 -7.349477658597234 3.1223517288137534 0.8877920506403251 1.2301058437163088 0.3286534040595529 0.20418532187589028 0.3503735059861286 6.521915968574234 0.14653871957567965 0.0621298297023792 4.472211575864993e-08 7.349477658597234 0.34231379307598375 HWPFMVVNDAGRPK ddPTM_KYSE-520_SHP099_60min_R1 11 HWPFMVVNDAGRPK 14 1 E9PKE3;P11142;E9PNE6;P11142-2;E9PN89;E9PLF4;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PN25 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ;;;;;;;;;; 187.57 1.0731000000000002e-10 23818540000.0 24692490.0 21264990.0 17529980.0 15575457.0 27811810.0 22503290.0 18163540.0 14979410.0 17329080.0 14861589.0 False True 23322748.356441572 20243387.960999247 18659990.55975969 17055743.750348113 30000441.21944743 22362838.619938422 19999687.882267587 14927449.922930595 14182555.90255741 14729926.88360127 1.5833580533523648 1.3743033567624885 1.2668080912562936 1.1578973802874852 2.036699941317884 1.5181907416549922 1.3577588022200644 1.0134096415338778 0.9628395316983382 1.0 23.812246933354636 -7.190049434097072 3.0106060965186354 0.9787611046425149 1.4819189293125 0.5057786874895295 0.21999012447430275 0.24353842106148577 4.297579074377466 0.13394955292289287 0.06666517466560389 6.45580740840084e-08 7.190049434097072 0.503157824669985 HWPFQVINDGDKPK ddPTM_KYSE-520_SHP099_60min_R1 2 HWPFQVINDGDKPK 14 1 A0A0G2JIW1;P0DMV9;P0DMV8 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 112.94 0.00095205 2013660000.0 6176300.0 4623100.0 3438500.0 3420500.0 6271300.0 5107800.0 3973000.0 4186400.0 4292100.0 3874300.0 False True 5833688.326851202 4400999.336585424 3660151.2117945193 3745583.291589176 6764815.631184045 5075920.325557791 4374629.612743402 4171878.3555131042 3512762.8350360543 3839976.7161597935 1.5191988801133252 1.1461005266163922 0.9531701576187914 0.9754182299665044 1.761681419242892 1.3218622665592656 1.1392333693935242 1.0864332426695629 0.9147875351049074 1.0 21.872666132462626 -7.262322495290641 2.145665339251374 0.97176310173342 1.262794599241852 0.2321524377732811 0.22868962408568738 0.5819499739137113 5.058217508352288 0.1729514224394595 0.07187964548403318 5.466099144709973e-08 7.262322495290641 0.29103149750843194 HWVAPGGPYSAETPGVPS(ph)PIAALK ddPTM_KYSE-520_SHP099_60min_R1 3 HWVAPGGPYSAETPGVPSPIAALK 24 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 HWVAPGGPYSAETPGVPS(1)PIAALK;HWVAPGGPYSAETPGVPS(1)PIAALK;HWVAPGGPYSAETPGVPS(1)PIAALK 125.05 3.7168e-05 1622412000.0 434162.0 489381.0 407966.0 401678.0 372798.0 422613.0 348677.0 386315.0 508064.0 393158.0 True False 410078.16837951005 465870.40218414285 434264.14112867933 439853.35635110596 402135.08166953427 419975.315506667 383924.6739195895 384974.9634315989 415812.38485118217 389674.92599229596 1.0523596490979188 1.1955359996484693 1.1144266981583129 1.1287699746937323 1.0319757696636727 1.077758119635776 0.9852434640025565 0.9879387606253373 1.0670750338691357 1.0 18.571911577331047 -5.935449769927171 1.4087414485966445 1.014959522672277 1.1312320678633958 0.5327159694683135 0.04402781249660497 0.29850941686831167 1.227652738347944 0.017241489424913013 0.020477778379017153 1.1602464013461997e-06 5.935449769927171 0.11627254519111885 HWWQDLFR ddPTM_KYSE-520_SHP099_60min_R1 1 HWWQDLFR 8 0 Q9Y6D5;Q9Y6D6;E5RHL7;E5RIF2 Q9Y6D5;Q9Y6D6 ARFGEF2;ARFGEF1 Brefeldin A-inhibited guanine nucleotide-exchange protein 2;Brefeldin A-inhibited guanine nucleotide-exchange protein 1 0 93.162 0.014847999999999998 0.0 24489.0 20382.0 16956.0 17513.0 21979.0 18791.0 15270.0 18662.0 16390.0 13145.0 False True 23130.546352388796 19402.81812599427 18049.01089055924 19177.430254524545 23708.622256596558 18673.718398832476 16813.640620838574 18597.265877743535 13413.989158277058 13028.545526655245 1.775374411906974 1.4892543520147992 1.3853435023604568 1.4719548099432302 1.819744361186813 1.4332926388926308 1.2905232273579088 1.4274245609147378 1.0295845480858343 1.0 13.669388413677671 -7.5096931615358145 0.9125183238515907 0.9844751052067738 1.5626408439036739 0.6521036227157698 0.1492161547806665 0.3659663008113734 0.5796561097540709 0.14279177743166033 0.054767547281204816 3.0924795646919665e-08 7.5096931615358145 0.5781657386969 HY(ph)GGLTGLNK ddPTM_KYSE-520_SHP099_60min_R1 2 HYGGLTGLNK 10 0 P18669;Q8N0Y7;P15259 P18669 PGAM1;PGAM4;PGAM2 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4;Phosphoglycerate mutase 2 1 HY(0.999)GGLT(0.001)GLNK;HY(0.998)GGLT(0.002)GLNK 102.62 0.0020526999999999998 1015380000.0 1907220.0 1902020.0 1737530.0 2276620.0 1978610.0 1769990.0 1741870.0 1915330.0 2209870.0 1803230.0 True False 1801422.7046511907 1810644.104209774 1849533.9639462954 2492989.280309239 2134315.3502490814 1758942.835865547 1917955.2186129729 1908686.1672713824 1808613.3142893068 1787254.7850917096 1.0079271963223497 1.0130867290512606 1.0348462789827642 1.394870670429519 1.1941863958358703 0.9841589741639942 1.073129155737332 1.0679429610106999 1.011950466926013 1.0 20.769313884166234 -6.265656777986561 24.864873774612846 1.0345385505217417 1.1320864158774913 0.1766082441010478 0.10899100171729885 733.4758898685291 4324405.380074873 0.04208031490036222 0.038440525742204266 5.424294018661753e-07 6.265656777986561 0.09754786535574955 HY(ph)MAYAASR ddPTM_KYSE-520_SHP099_60min_R1 1 HYMAYAASR 9 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 HY(0.925)MAY(0.075)AASR 71.715 0.028758 1003400000.0 139840.0 119470.0 112990.0 154070.0 87424.0 116360.0 105070.0 119000.0 142780.0 119610.0 True False 132082.79643587105 113730.48187187407 120273.51619039218 168712.7664771656 94303.77142548328 115633.75407844943 115691.50098438191 118587.21677480874 116854.75119089663 118550.34845517192 1.1141493733003764 0.95934329467517 1.0145353240852923 1.4231317636401708 0.7954744347389487 0.9753978422271331 0.9758849509255467 1.0003109929250926 0.9856972393048979 1.0 16.855140377778113 HYAHTDCPGHADYVK ddPTM_KYSE-520_SHP099_60min_R1 6 HYAHTDCPGHADYVK 15 0 P49411 P49411 TUFM Elongation factor Tu, mitochondrial 0 ;;;;; 207.52 6.531699999999999e-13 65101300000.0 18354000.0 18863700.0 14098500.0 15913000.0 19919600.0 20499200.0 16708200.0 18047500.0 17451900.0 11900800.0 False True 17335867.032208096 17957459.53700904 15007311.868397592 17425366.735582102 21487159.1929797 20371256.88900783 18397227.912317935 17984897.43481816 14283074.886597648 11795368.170682305 1.4697181793186282 1.5224161956760938 1.272305505961116 1.4773058783271644 1.821660747002929 1.7270556199882865 1.5596993367315761 1.5247423543353307 1.210905389294978 1.0 23.491717114558977 -7.903046662099278 2.6260458724880857 1.0028667501332664 1.5535819040505428 0.630505726469973 0.13986016737722082 0.18069863157828175 2.5831656987018485 0.15122919411106078 0.04136743767321208 1.2501247052851579e-08 7.903046662099278 0.5507151539172763 HYCDSEKPR ddPTM_KYSE-520_SHP099_60min_R1 6 HYCDSEKPR 9 1 H7BYK1;Q9UGI8-2;Q9UGI8 H7BYK1 TES Testin 0 ;;;;; 214.93 6.846899999999999e-09 4736980000.0 3632370.0 3371070.0 2275380.0 2780940.0 3653870.0 3404080.0 2748440.0 3113980.0 2963040.0 2310120.0 False True 3430875.1951499213 3209118.73712077 2422054.635536721 3045239.701479898 3941408.7813235624 3382833.87404064 3026279.1373894964 3103178.3301883945 2425026.6281599286 2289654.1340461634 1.4984250870619698 1.401573578036336 1.0578255464534225 1.3299998703727802 1.7213991941911768 1.477443175254886 1.3217188973609764 1.3553044034229795 1.059123555868476 1.0 21.12669825638814 -7.774436930188401 2.8619290177632957 0.9944126314121727 1.3986253212990143 0.4679003056586828 0.157279094034871 0.25120009037966323 3.8749550824124586 0.16018519607583603 0.045198120318135866 1.680982026258574e-08 7.774436930188401 0.40421268988684156 HYEADDFEMAIR ddPTM_KYSE-520_SHP099_60min_R1 2 HYEADDFEMAIR 12 0 C9JSL4;C9J313;Q8IVL5-2;Q8IVL5 C9JSL4 LEPREL1 Prolyl 3-hydroxylase 2 0 ; 138.24 6.651899999999999e-05 211470000.0 337770.0 312300.0 279300.0 274780.0 323560.0 327790.0 266820.0 291200.0 358750.0 291550.0 False True 319033.2247721987 297296.63922814315 297304.12489580037 300895.0085843806 349022.3311954311 325744.1410224729 293792.76951225643 290189.8951665907 293610.04335154936 288967.0938224675 1.1040469021991928 1.02882523852627 1.0288511434400724 1.0412777614368827 1.2078272531953405 1.1272707100089399 1.0166997412264307 1.0042316283419954 1.0160673987742506 1.0 18.14054568937014 -6.856022216051097 7.383601655039059 1.0084846961128717 1.0871910788186112 0.3781669294935559 0.05053218261467268 0.2998369289524373 20.233606364427267 0.024016607959276803 0.016170652815489926 1.3930855387400252e-07 6.856022216051097 0.07870638270573949 HYEDFPK ddPTM_KYSE-520_SHP099_60min_R1 1 HYEDFPK 7 0 O94906-2;O94906 O94906-2 PRPF6 Pre-mRNA-processing factor 6 0 111.82 0.0049577 335440000.0 888950.0 849130.0 575560.0 540700.0 877660.0 848190.0 625000.0 654940.0 739070.0 668580.0 False True 839638.1714221092 808336.5202298854 612661.5185285611 592087.9654326165 946726.8487976942 842896.1315898956 688181.0994121879 652668.1660041446 604873.5184385487 662656.9013473687 1.267078286991183 1.219841698752867 0.9245531394645512 0.8935060726429234 1.4286833003213744 1.2719947983278368 1.0385179691223638 0.9849262335864696 0.912800451045888 1.0 19.337902565219217 -6.967044618665296 6.5004386545580495 0.9707464173626218 1.158695398699082 0.2672567887309142 0.15193570723355326 0.28687206228445 36.71057877615048 0.07201085986561843 0.04756695864028394 1.0788358788003302e-07 6.967044618665296 0.1879489813364602 HYEDGYPGGSDNYGS(ph)LSR ddPTM_KYSE-520_SHP099_60min_R1 8 HYEDGYPGGSDNYGSLSR 18 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12 O60716-5 CTNND1 Catenin delta-1 1 HYEDGYPGGSDNYGS(0.987)LS(0.013)R;HYEDGYPGGS(0.001)DNYGS(0.993)LS(0.006)R;HYEDGYPGGSDNYGS(0.979)LS(0.021)R;HYEDGYPGGSDNYGS(0.993)LS(0.007)R;HYEDGYPGGSDNYGS(0.983)LS(0.017)R;HYEDGYPGGSDNYGS(0.905)LS(0.095)R;HYEDGYPGGSDNYGS(0.936)LS(0.064)R;HYEDGYPGGSDNYGS(0.787)LS(0.213)R 324.39 4.6634e-48 4169700000.0 3338700.0 3251120.0 3222450.0 3991120.0 3234000.0 3232190.0 2915020.0 3375730.0 4105540.0 3626860.0 True False 3153495.6554665524 3094931.315169394 3430174.2831022963 4370434.844826019 3488497.401057063 3212016.703289993 3209698.669453628 3364020.380531303 3360077.428241171 3594728.842054383 0.8772555021603058 0.8609637753374034 0.9542233736723118 1.2157898514337793 0.970447996033935 0.8935351856621068 0.8928903431890816 0.9358203437143732 0.9347234731398797 1.0 21.777451518576363 -6.022755236571657 24.416851402955114 0.9257556480817892 0.9828826215421042 0.049765538563651845 0.0942871432771022 1815.166213693732 1947708.7421203265 0.03413833805325263 0.034402005758081035 9.489531318075432e-07 6.022755236571657 0.05712697346031492 HYELYR ddPTM_KYSE-520_SHP099_60min_R1 6 HYELYR 6 0 Q9P0V9-2;E7EX04;E7EW69;Q9P0V9;B5ME97;D6RDU5;F8W8I8;A6NFQ9;D6RER5;B1AMS2;A0A087X142;H0Y961;D6RGI3;A6NMH6;Q14141-2;Q14141;Q9NVA2-2;Q14141-4;Q92599-4;Q9P0V9-3;Q92599-3;Q9NVA2;Q92599;Q92599-2 Q9P0V9-2 SEPT10;SEPT11;SEPT8;SEPT6 Septin-10;Septin-6;Septin-11;Septin-8 0 ;;;;; 142.53 0.011696999999999999 13784140000.0 2186950.0 1670520.0 1214480.0 1182900.0 1829190.0 1629140.0 1384240.0 1378040.0 1422960.0 1329670.0 False True 2065635.5239232604 1590265.7116983598 1292767.324036706 1295322.4603481467 1973136.846332585 1618971.9329612022 1524172.488080523 1373259.9008769544 1164586.333902495 1317890.1582676054 1.5673806431930428 1.2066754590449313 0.9809370803224422 0.9828758885724405 1.4971937030976203 1.2284574118751863 1.1565246758379926 1.0420139282943988 0.8836748090094007 1.0 20.329798700879305 -7.2972163005111605 2.2249537246046085 0.9452647144083309 1.2277806083653016 0.31580608162636525 0.1784738671105118 0.4492515324147809 4.198656340015928 0.1340432115283426 0.054384688728328044 5.0441001341769435e-08 7.2972163005111605 0.28251589395697063 HYEMLANR ddPTM_KYSE-520_SHP099_60min_R1 1 HYEMLANR 8 0 A0A2R8YFH5;Q15437 A0A2R8YFH5 SEC23B Protein transport protein Sec23B 0 140.09 0.0010625 412840000.0 246560.0 243110.0 171700.0 190160.0 238190.0 247600.0 198270.0 206550.0 223300.0 184460.0 False True 232882.82529482554 231430.6306844507 182768.05672971328 208232.74922631122 256934.19788428672 246054.63655744365 218313.0665287274 205833.52625913237 182754.3489349155 182825.82790770842 1.273796093035532 1.265853043483978 0.9996840097558628 1.1389678997183503 1.4053495658938773 1.3458417739623392 1.1941040772364677 1.1258449017555572 0.9996090324129203 1.0 17.48011036957156 -7.528507850825941 2.210924737015211 0.9953675670357924 1.232470604862131 0.4413402433409478 0.10476498482601261 0.3469540652382011 3.119177647576976 0.09935579622425146 0.0325990104866063 2.9613664317126977e-08 7.528507850825941 0.23710303782633857 HYGEHVCTAK ddPTM_KYSE-520_SHP099_60min_R1 5 HYGEHVCTAK 10 0 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 0 ;;;; 157.78 9.9928e-05 5043054000.0 8713640.0 8490270.0 5845630.0 5443381.0 8301250.0 8117000.0 6532260.0 7832760.0 6878010.0 5839303.0 False True 8230277.018989302 8082384.685044912 6222448.66313869 5960718.2936278265 8954511.147348477 8066338.792151722 7192604.589514011 7805589.983739937 5629136.764522339 5787571.318328984 1.4220605788345755 1.3965071427194953 1.0751398679844288 1.0299170352770417 1.547196683173464 1.3937346683929375 1.2427673360560323 1.3486814337855286 0.9726250364630687 1.0 22.464526635660867 -7.765111941278623 24.996958665318132 0.9863123152309404 1.3017759101768005 0.42375769612125735 0.14948518067133418 102.13828762887516 695144.9118374023 0.1354547109721263 0.040292830407055634 1.7174656459120673e-08 7.765111941278623 0.31546359494586007 HYGGLTGLNK ddPTM_KYSE-520_SHP099_60min_R1 2 HYGGLTGLNK 10 0 P18669;Q8N0Y7;P15259 P18669 PGAM1;PGAM4;PGAM2 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4;Phosphoglycerate mutase 2 0 ; 163.16 0.0001151 1957180000.0 1960590.0 2113070.0 1364940.0 1705680.0 1921940.0 1770790.0 1362860.0 1521370.0 1508070.0 1525010.0 False True 1851832.1643607295 2011554.9454172673 1452926.2163812178 1867787.3143686089 2073185.7436572728 1759737.842768802 1500631.1890318303 1516092.7225604288 1234242.5033509983 1511499.5978398265 1.2251621945565137 1.330833926976957 0.9612481660317215 1.235718035941243 1.3716085314347322 1.1642330869844408 0.992809519219503 1.0030387865978705 0.816568198307778 1.0 20.527549164436294 -6.777247815221662 2.9367188023732194 0.9417346929088859 1.2210651195268138 0.5734335061904615 0.11212365126468947 0.20187930274792742 3.5709649703063313 0.05223911823191139 0.03523325765736903 1.6701373358819741e-07 6.777247815221662 0.27933042661792795 HYGIT(ph)SPISLAAPK ddPTM_KYSE-520_SHP099_60min_R1 1 HYGITSPISLAAPK 14 0 G3XAH6;P51003;G3V457;G3V3I9;A0A0C4DGK1;P51003-2 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 HY(0.128)GIT(0.43)S(0.43)PIS(0.012)LAAPK 67.416 0.040789 724650000.0 1722300.0 1710300.0 1586200.0 1846900.0 1455600.0 1556400.0 1383900.0 1580100.0 1910600.0 1588600.0 True False 1626760.5856800685 1628134.6207873626 1688448.9900097356 2022428.8207092662 1570147.4387689135 1546685.9302827343 1523798.117562445 1574619.0018981136 1563683.2023065367 1574526.2399121 1.0331746429141027 1.0340473086547326 1.0723536688115123 1.2844681590204372 0.9972189722646789 0.9823182942756674 0.967781977166359 1.0000589142204572 0.9931134602074536 1.0 20.58648636990681 -5.958196492849347 24.99985482953055 0.9876214521900339 1.1037637733016579 0.42190927538712253 0.06651593027397816 150.82306258879134 90196.43380231631 0.02162555117503597 0.024521051480801772 1.101041040164896e-06 5.958196492849347 0.11614232111162393 HYGITS(ph)PISLAAPK ddPTM_KYSE-520_SHP099_60min_R1 6 HYGITSPISLAAPK 14 0 G3XAH6;P51003;G3V457;G3V3I9;A0A0C4DGK1;P51003-2 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 HY(0.001)GIT(0.431)S(0.566)PIS(0.002)LAAPK;HY(0.025)GIT(0.133)S(0.842)PISLAAPK;HYGIT(0.088)S(0.907)PIS(0.005)LAAPK;HYGIT(0.022)S(0.978)PISLAAPK;HYGIT(0.001)S(0.999)PISLAAPK;HYGIT(0.002)S(0.998)PISLAAPK 302.2 2.0963e-33 11802140000.0 7198900.0 7261620.0 6305210.0 7111820.0 6204020.0 6590970.0 5992880.0 6443200.0 8116810.0 6569560.0 True False 6799562.66634864 6912760.875286157 6711653.92529269 7787725.2345533455 6692241.077954875 6549833.311433808 6598698.795272501 6420850.043054186 6643001.912129019 6511358.809440339 1.0442617071709295 1.06164643626517 1.0307608782919409 1.1960215160102214 1.02777949638596 1.0059088284211413 1.013413480717041 0.9860998650151285 1.0202174548418097 1.0 22.6345272099626 -5.984016018779425 24.99998604125974 1.0061177845148839 1.0821424977842893 0.42931504021885236 0.042607229887406305 239.764101909087 375004.4930831741 0.013316400032077996 0.015094680882725827 1.03749014770035e-06 5.984016018779425 0.07602471326940541 HYGPGWVSMANAGK ddPTM_KYSE-520_SHP099_60min_R1 2 HYGPGWVSMANAGK 14 0 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 ; 247.13 1.9873e-18 2157300000.0 1864800.0 2145830.0 1277910.0 1934530.0 2148480.0 1894530.0 1613550.0 1402830.0 1467500.0 1264160.0 False True 1761355.8266133617 2042741.105843506 1360286.1233282925 2118387.149562346 2317553.1528209895 1882705.5355297772 1776663.3807304578 1397963.9101529827 1201038.9926645248 1252960.5259015975 1.4057552414477994 1.6303315735933526 1.0856576046954602 1.6907054179045347 1.8496617450524542 1.5026056261230032 1.417972349489636 1.115728613355193 0.9585609185894254 1.0 20.256909533079654 -7.276550107930919 2.1733291058854234 0.980807698616295 1.5326427861353245 0.5950389303451347 0.1880635594440306 0.24449117809412974 2.1797211306539435 0.13956288781280812 0.05740788423566634 5.2899295965790455e-08 7.276550107930919 0.5518350875190294 HYHPEVSK ddPTM_KYSE-520_SHP099_60min_R1 1 HYHPEVSK 8 0 Q9BVI4 Q9BVI4 NOC4L Nucleolar complex protein 4 homolog 0 100.15 0.0030026999999999996 217570000.0 314580.0 438570.0 288740.0 385250.0 406860.0 481890.0 315020.0 405100.0 311790.0 325130.0 False True 297129.6203003172 417500.4388930095 307352.6424003345 421864.04417036363 438877.5672832647 478882.34576198104 346865.2958989243 403694.80265105073 255176.7955862847 322249.60114731203 0.9220480622549736 1.2955809329369963 0.9537719870127391 1.3091220056390829 1.361918108573974 1.486060321120666 1.076387044899272 1.2527394951421744 0.791860702628563 1.0 18.297819047381687 -7.754088890729855 24.987228038407196 0.8959303221180895 1.215190836642725 0.33494858683676554 0.17515557905390483 167.3153843693011 568785.5580265339 0.12449981392513808 0.04494536048207646 1.7616154447561658e-08 7.754088890729855 0.31926051452463555 HYLDFINHYANLFHEK ddPTM_KYSE-520_SHP099_60min_R1 1 HYLDFINHYANLFHEK 16 0 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7;A0A2R8Y5T0 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 51.092 0.048780000000000004 27389000.0 18651.0 24577.0 22770.0 20382.0 28803.0 25857.0 21619.0 18502.0 17735.0 7406.7 False True 17616.391850153264 23396.2840291709 24237.79063328813 22319.099151928236 31069.632233347766 25695.61687183286 23804.45950110736 18437.820880399267 14514.771062967882 7341.0824003254065 2.399699511528761 3.1870346569238643 3.301664429241898 3.0403008623004832 4.232295803132594 3.500249073718864 3.2426361949093754 2.5115943228728748 1.977197676234296 1.0 12.841777080489914 -7.808776094414138 1.4138963833824538 1.041290945139525 3.314058795474841 0.743422025868526 0.4340258629598745 0.19952611231963652 0.8320229565822235 0.43175053748006664 0.13285376279894642 1.5531875675391544e-08 7.808776094414138 2.272767850335316 HYLGHNDDIK ddPTM_KYSE-520_SHP099_60min_R1 4 HYLGHNDDIK 10 0 C9JRL6;O95834-2;O95834-3;K7ERR2;K7EIM1;K7EQR0;K7ERY9;K7EKU5;A0A0C4DGQ7;K7EIK7;O95834 C9JRL6 EML2 Echinoderm microtubule-associated protein-like 2 0 ;;; 162.38 7.8445e-05 2919410000.0 2938870.0 2474740.0 1681180.0 1570870.0 2470910.0 2582060.0 1932140.0 2315910.0 2262580.0 1818660.0 False True 2775845.022607899 2355849.775739531 1789551.5527831055 1720165.0125007126 2665356.559445241 2565944.4057734767 2127459.567069224 2307876.648747457 1851752.507000275 1802548.0872960696 1.5399561554953205 1.306955299746509 0.9927899096814334 0.9542963234235062 1.4786604464147395 1.4235095439936625 1.1802512133035747 1.2803412375030787 1.0272971467729413 1.0 20.781606316656116 -7.779535552007375 7.770805998915875 1.0109016803105213 1.2603230090251158 0.24150187364131814 0.18085076838870057 0.29074961994478005 82.5544159015695 0.17183681499323553 0.04895707483518791 1.6613626705227038e-08 7.779535552007375 0.24942132871459455 HYNGEAYEDDEHHPR ddPTM_KYSE-520_SHP099_60min_R1 15 HYNGEAYEDDEHHPR 15 0 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 ;;;;;;;;;;;;;; 220.6 2.9105e-14 22411507000.0 5914247.0 6441460.0 5826019.0 5814733.0 6604874.0 6190082.0 6371817.0 6463234.0 6610125.0 4127940.0 False True 5586171.929150904 6132002.592771428 6201573.506699988 6367363.476056775 7124640.007207598 6151447.402143665 7015942.445301227 6440814.549784155 5409892.927691039 4091369.6630887273 1.3653549762437487 1.498765229671804 1.515769538658159 1.5562914134846997 1.7413826160672419 1.5035178702233687 1.714815092020952 1.5742440992050921 1.32226940442407 1.0 21.964152462700547 -8.03099631175556 2.856401040192817 1.0014576261673542 1.5645795539821843 0.7427073786942812 0.10255321551227248 0.13679281944757843 2.7185740650507237 0.1026130243014843 0.027564769325522605 9.311157829319361e-09 8.03099631175556 0.5631219278148301 HYQEEGQGTEVVQGVLLGLVVEDR ddPTM_KYSE-520_SHP099_60min_R1 2 HYQEEGQGTEVVQGVLLGLVVEDR 24 0 E5RGU4;A0A087WZK9;B3KS98;O15372;E5RFW7;E5RFH0 E5RGU4 EIF3H Eukaryotic translation initiation factor 3 subunit H 0 ; 129.32 0.00011319 117798000.0 126278.0 78810.0 73151.0 110717.0 67545.0 50364.0 60597.0 77255.0 69019.0 41298.0 False True 119273.10761104795 75023.84930377828 77866.43050573838 121239.51039172022 72860.4072215212 50049.659594422796 66722.7361297286 76987.02043645257 56486.88942740231 40932.13184935782 2.913923663932476 1.8328839939216435 1.9023301984931922 2.961964229909084 1.780029622929701 1.2227474439547916 1.6300821167900006 1.8808456085255283 1.380013375196057 1.0 15.320946187508124 -5.988528732706644 24.608860258156522 1.4919316486083327 2.331907380098038 0.5570470902332987 0.408239842066231 157.19282383012165 337216.8709015208 0.1256773164838183 0.14238579236278306 1.0267654991268262e-06 5.988528732706644 0.8399757314897054 HYQGEEKS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 10 HYQGEEKSD 9 1 P13984 P13984 GTF2F2 General transcription factor IIF subunit 2 1 HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D;HYQGEEKS(1)D 159.08 9.895700000000001e-05 14548440000.0 11457290.0 9907101.0 8351354.0 10720986.0 11052632.0 11648795.0 11447903.0 9667256.0 12349795.0 14050406.0 True False 10821731.284158623 9431148.997098222 8889695.641478842 11739905.286058014 11922411.257526323 11576090.549503904 12605168.756006556 9633722.545290517 10107383.540997189 13925930.333890444 0.7770921600708158 0.677236548724244 0.638355601984069 0.8430248467843853 0.8561303246298516 0.8312615582552557 0.9051581082041137 0.6917830489102536 0.7257959287933275 1.0 23.73127037549362 -5.272958710329249 24.342380685887903 0.8268247768940515 0.695528947485246 0.34334291991698784 0.08715834751022318 605.9934647548027 1280570.3626301845 0.024857037258955744 0.03724624315870529 5.333856036361176e-06 5.272958710329249 -0.13129582940880558 HYQIHR ddPTM_KYSE-520_SHP099_60min_R1 2 HYQIHR 6 0 Q9BZE4 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 0 ; 109.88 0.014728 248990000.0 256070.0 220210.0 195616.0 181917.0 216550.0 211300.0 170788.0 173625.0 172484.0 127232.0 False True 241865.28663711046 209630.7810580514 208225.72035666657 199206.33698465934 233591.25299904394 209981.19832224483 188052.91777025413 173022.73539937954 141165.253567801 126104.8234649982 1.9179701457196272 1.66235339218596 1.6512113861724087 1.5796884806706166 1.8523577971137621 1.6651321698295503 1.4912428613204498 1.3720548559937038 1.1194278671424729 1.0 16.94426393373455 -7.450636068210631 1.061555240856074 0.9975068921208502 1.7234198310352893 0.8811774604956323 0.09647346692795021 0.165713438350435 0.3366275125746471 0.08995002221646294 0.032987822785125756 3.542941094867388e-08 7.450636068210631 0.7259129389144391 HYS(ph)DHWEDER ddPTM_KYSE-520_SHP099_60min_R1 2 HYSDHWEDER 10 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 HY(0.001)S(0.999)DHWEDER;HYS(1)DHWEDER 93.01100000000001 0.0021294 984930000.0 1086390.0 994140.0 772620.0 1015930.0 933210.0 1164440.0 1089310.0 1168900.0 1350790.0 938440.0 True False 1026125.7810352268 946380.0221654368 822424.3214357084 1112483.6817495066 1006648.3177614309 1157172.298032913 1199428.0854411058 1164845.3587233098 1105520.5866448483 930126.1516952731 1.1032114075762542 1.0174749096566513 0.8842072872983258 1.1960567711399832 1.0822707392182087 1.2441025294513215 1.2895326975324752 1.2523520133266128 1.188570587580939 1.0 19.827066874617177 -5.286887194901506 24.225684924958973 1.1927881124842359 1.0032155798091495 0.4201305817822105 0.0945070554761389 445.5258758339574 424128.5254660358 0.02689573627376178 0.0399128404070708 5.165505224056674e-06 5.286887194901506 -0.18957253267508634 IAAAGLDVT(ph)SPEPLPTNHPLLTLK ddPTM_KYSE-520_SHP099_60min_R1 1 IAAAGLDVTSPEPLPTNHPLLTLK 24 0 U3KQ56;Q9UBQ7 U3KQ56 GRHPR Glyoxylate reductase/hydroxypyruvate reductase 1 IAAAGLDVT(0.5)S(0.5)PEPLPTNHPLLTLK 72.569 0.02348 207610000.0 84858.0 88459.0 76154.0 66805.0 70392.0 93080.0 62672.0 92658.0 93807.0 88370.0 True False 80150.75757977096 84209.29686033395 81063.00869070817 73154.12711434445 75931.44992430715 92499.0531937271 69007.49737977708 92336.59102453974 76774.01348203153 87587.11055081962 0.9150976333814099 0.9614348085095717 0.9255129913627411 0.8352156687701109 0.8669249327530945 1.0560806562976808 0.7878727468665345 1.0542257924008622 0.8765446536506746 1.0 16.41843095585285 IAAPELHKGDS(ph)DS(ph)EEDEPTK ddPTM_KYSE-520_SHP099_60min_R1 17 IAAPELHKGDSDSEEDEPTK 20 1 Q92733 Q92733 PRCC Proline-rich protein PRCC 2 IAAPELHKGDS(1)DS(1)EEDEPTK;IAAPELHKGDS(1)DS(1)EEDEPTK;IAAPELHKGDS(1)DS(0.997)EEDEPT(0.003)K;IAAPELHKGDS(1)DS(1)EEDEPTK;IAAPELHKGDS(1)DS(0.996)EEDEPT(0.004)K;IAAPELHKGDS(1)DS(0.993)EEDEPT(0.008)K;IAAPELHKGDS(1)DS(1)EEDEPTK;IAAPELHKGDS(1)DS(0.995)EEDEPT(0.005)K;IAAPELHKGDS(1)DS(0.955)EEDEPT(0.045)K;IAAPELHKGDS(1)DS(1)EEDEPTK;IAAPELHKGDS(1)DS(1)EEDEPTK;IAAPELHKGDS(1)DS(0.996)EEDEPT(0.004)K;IAAPELHKGDS(1)DS(1)EEDEPTK;IAAPELHKGDS(1)DS(0.94)EEDEPT(0.06)K;IAAPELHKGDS(1)DS(0.998)EEDEPT(0.002)K;IAAPELHKGDS(1)DS(0.998)EEDEPT(0.002)K;IAAPELHKGDS(1)DS(0.935)EEDEPT(0.065)K 210.96 7.695399999999999e-19 100367100000.0 55756800.0 49544000.0 45963690.0 47251730.0 47795800.0 48245380.0 47303540.0 47667500.0 57982490.0 45626060.0 True False 52663859.155574836 47163831.87293985 48926583.00190429 51742520.21244931 51557057.5390981 47944262.68770494 52085443.46126151 47502152.56817809 47454331.43562586 45221848.60493753 1.1645667034899752 1.042943473739158 1.0819235504795852 1.1441929467430003 1.140091772662935 1.0602013001845787 1.1517760787774294 1.050424828563766 1.0493673500654852 1.0 25.430516632830482 -7.726910208441287 1.6379755517668493 1.0056697481086965 1.108676848744838 0.4514556050539553 0.040080889558565626 0.3337895307199665 1.729608307149463 0.036836774657089906 0.011164881705710077 1.8753822083306736e-08 7.726910208441287 0.10300710063614149 IAAPELHKGDS(ph)DS(ph)EEDEPTKK ddPTM_KYSE-520_SHP099_60min_R1 6 IAAPELHKGDSDSEEDEPTKK 21 2 Q92733 Q92733 PRCC Proline-rich protein PRCC 2 IAAPELHKGDS(1)DS(1)EEDEPTKK;IAAPELHKGDS(1)DS(1)EEDEPTKK;IAAPELHKGDS(1)DS(1)EEDEPTKK;IAAPELHKGDS(1)DS(1)EEDEPTKK;IAAPELHKGDS(1)DS(1)EEDEPTKK;IAAPELHKGDS(1)DS(1)EEDEPTKK 175.48 1.1851e-09 12323700000.0 4910540.0 4390320.0 3715350.0 4099340.0 4312950.0 4347140.0 4116610.0 4007260.0 5049970.0 4049050.0 True False 4638142.557281199 4179402.4371953243 3954847.405770184 4488940.041088486 4652354.627671329 4320007.886770293 4532757.113041934 3993359.750361515 4133022.747384037 4013178.5671132337 1.155727929798428 1.0414195050886208 0.9854650969630269 1.1185497894048302 1.1592692799159119 1.0764554366385366 1.1294680855186676 0.9950615661824451 1.0298626583060344 1.0 21.936313919849574 -7.271739773670089 24.950300565454416 1.009346577192832 1.0915470955375668 0.3811909666200384 0.0505755638142797 862.0201054674651 2088029.3990042475 0.029055609732855977 0.014194693638867354 5.34884762744644e-08 7.271739773670089 0.08220051834473474 IAAS(ph)SSFR ddPTM_KYSE-520_SHP099_60min_R1 1 IAASSSFR 8 0 Q99961-3;Q99961-2;Q99961 Q99961-3 SH3GL1 Endophilin-A2 1 IAAS(0.749)S(0.126)S(0.126)FR 99.01299999999999 0.004796 2441000000.0 4220600.0 4545700.0 4370300.0 4572300.0 3919500.0 3832800.0 4048500.0 3916700.0 4833100.0 4271600.0 True False 3986474.904442487 4327317.748765195 4652016.530727238 5006850.017287873 4227942.351095607 3808878.0734950253 4457761.889552395 3903113.8818646474 3955530.8725362346 4233756.947254508 0.9415927636156871 1.0220987653935494 1.0987915907038457 1.1826021379273313 0.9986266107782423 0.8996449538665637 1.0529092588659699 0.9219031537452157 0.9342838811522479 1.0 22.013507018392033 -5.990149083778546 24.998647039863283 0.9610726403268913 1.0648359389669755 0.31429484451174117 0.06929051953559211 259.50468616385166 658539.7977024252 0.022460674655086985 0.0254390899902429 1.0229417785063035e-06 5.990149083778546 0.10376329864008416 IAASS(ph)SFR ddPTM_KYSE-520_SHP099_60min_R1 1 IAASSSFR 8 0 Q99961-3;Q99961-2;Q99961 Q99961-3 SH3GL1 Endophilin-A2 1 IAAS(0.073)S(0.463)S(0.463)FR 68.016 0.0479 0.0 551990.0 594010.0 625810.0 641920.0 601660.0 499040.0 572690.0 656890.0 701140.0 584380.0 True False 521370.01433521544 565472.867972812 666150.7139314038 702927.8837997146 649007.2190228796 495925.3062505114 630583.0941157856 654611.401909279 573830.6503010598 579202.8478407608 0.9001509855810563 0.9762950408149175 1.1501164340175127 1.2136126167545525 1.120518004085004 0.8562204210481631 1.0887085525676672 1.1301936866326496 0.9907248426700105 1.0 19.143709170358694 -4.555620541120443 5.8680491246146484 1.0734631055741135 0.9170192471318515 0.24572819893078002 0.09537809759336462 0.21772178980095855 21.141093681525682 0.02594255292938477 0.07448179571644224 2.782143065657044e-05 4.555620541120443 -0.15644385844226205 IAASSS(ph)FR ddPTM_KYSE-520_SHP099_60min_R1 11 IAASSSFR 8 0 Q99961-3;Q99961-2;Q99961 Q99961-3 SH3GL1 Endophilin-A2 1 IAAS(0.006)S(0.039)S(0.955)FR;IAASS(0.013)S(0.987)FR;IAAS(0.003)S(0.18)S(0.817)FR;IAASS(0.003)S(0.997)FR;IAAS(0.001)S(0.013)S(0.986)FR;IAAS(0.003)S(0.038)S(0.959)FR;IAASS(0.004)S(0.996)FR;IAAS(0.001)S(0.039)S(0.96)FR;IAAS(0.087)S(0.181)S(0.731)FR;IAAS(0.043)S(0.098)S(0.859)FR;IAAS(0.001)S(0.004)S(0.995)FR 158.08 0.0002519 71487500000.0 31983560.0 32196000.0 34684120.0 33387140.0 30291500.0 27876050.0 29218800.0 31826390.0 33521720.0 31719620.0 True False 30209368.169153806 30649255.832818758 36919913.8717541 36560243.747390345 32675268.714941274 27702065.231854275 32172521.452007715 31715991.681425255 27435020.661793716 31438608.844290946 0.9609002840671061 0.9748922410854216 1.174349477567883 1.1629090819019956 1.039335705876022 0.8811479340277741 1.023344309264818 1.0088229997233062 0.8726537741435637 1.0 24.906034044090276 -6.014753462303631 24.452685878926644 0.9616976547316041 1.0731649836563135 0.31093171971908673 0.07903065713378193 684.3196246926265 1134205.3928043176 0.027414849420089663 0.02841980400941361 9.665994366664223e-07 6.014753462303631 0.11146732892470945 IACDEEFS(ph)DS(ph)EDEGEGGR ddPTM_KYSE-520_SHP099_60min_R1 2 IACDEEFSDSEDEGEGGR 18 0 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 2 IACDEEFS(1)DS(1)EDEGEGGR;IACDEEFS(1)DS(1)EDEGEGGR 202.6 4.9191e-14 890370000.0 1088010.0 925090.0 835630.0 948620.0 996600.0 932340.0 991890.0 1088850.0 1125150.0 942490.0 True False 1027655.9164058373 880647.2878116014 889496.0468552726 1038776.5595869982 1075026.7501216684 926520.920226037 1092159.921113529 1085073.0334895006 920851.1227233331 934140.2718461253 1.1001087817088742 0.9427355980180507 0.9522082214669719 1.1120134640315658 1.1508194031685537 0.9918434609343731 1.1691605147855495 1.1615739800459406 0.9857739254763859 1.0 19.833279677799986 -5.268585589211636 24.671613134199827 1.0911229857860623 0.9927893390731306 0.18731732229197506 0.07744752474834261 629.2189788711075 2172321.6928739776 0.021313880763456708 0.03236395472622897 5.3878365334379895e-06 5.268585589211636 -0.09833364671293165 IACDEEFS(ph)DS(ph)EDEGEGGRR ddPTM_KYSE-520_SHP099_60min_R1 7 IACDEEFSDSEDEGEGGRR 19 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 2 IACDEEFS(1)DS(1)EDEGEGGRR;IACDEEFS(1)DS(1)EDEGEGGRR;IACDEEFS(1)DS(1)EDEGEGGRR;IACDEEFS(1)DS(1)EDEGEGGRR;IACDEEFS(1)DS(1)EDEGEGGRR;IACDEEFS(1)DS(1)EDEGEGGRR;IACDEEFS(1)DS(1)EDEGEGGRR 193.72 7.7382e-13 10820400000.0 6264830.0 6058610.0 5999480.0 5649110.0 5837680.0 5748390.0 5581470.0 5778050.0 7272540.0 5779380.0 True False 5917307.391271023 5767545.281440994 6386216.080307404 6185999.715933152 6297072.20414435 5712512.165752992 6145699.4574978305 5758007.293157005 5952030.061814289 5728179.189489606 1.033017158773322 1.006872356930387 1.1148771484008744 1.0799242676073368 1.0993148076964112 0.9972649208032178 1.0728888280545266 1.0052072574339381 1.0390788878838528 1.0 22.44964519316666 -6.264334465878854 24.997246606959603 1.0263384867054133 1.0668717211519916 0.27443581535667694 0.0354799513940511 412.25750234925994 3559557.28470834 0.01271611142881016 0.01168914589071444 5.440834731009124e-07 6.264334465878854 0.0405332344465783 IACEEEFS(ph)DS(ph)EEEGEGGR ddPTM_KYSE-520_SHP099_60min_R1 3 IACEEEFSDSEEEGEGGR 18 0 Q13547 Q13547 HDAC1 Histone deacetylase 1 2 IACEEEFS(1)DS(1)EEEGEGGR;IACEEEFS(1)DS(1)EEEGEGGR;IACEEEFS(1)DS(1)EEEGEGGR 202.35 5.6036e-13 3339200000.0 3332720.0 3016150.0 2810270.0 2863110.0 3051550.0 2917950.0 2909640.0 3155430.0 3575100.0 2913750.0 True False 3147847.3779873867 2871249.626666549 2991424.5007909792 3135219.1135745863 3291689.6240555635 2899737.9916914036 3203774.806549883 3144484.5498128957 2925951.9609369272 2887936.441863201 1.0899988422032236 0.9942218897359506 1.0358346040541706 1.0856260782359346 1.1398068102675674 1.0040864991545966 1.1093647215043672 1.088834402388779 1.0131635580765066 1.0 21.46160756085058 -5.239781701735813 21.55038724148554 1.069364105485213 1.0354387416046062 0.03053838770775874 0.04910458793204142 356.7095594513129 354935.69398147013 0.012881882496152866 0.022264156528072312 5.7572925511769355e-06 5.239781701735813 -0.03392536388060674 IACEEEFS(ph)DS(ph)EEEGEGGRK ddPTM_KYSE-520_SHP099_60min_R1 6 IACEEEFSDSEEEGEGGRK 19 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 2 IACEEEFS(1)DS(1)EEEGEGGRK;IACEEEFS(1)DS(1)EEEGEGGRK;IACEEEFS(1)DS(1)EEEGEGGRK;IACEEEFS(1)DS(1)EEEGEGGRK;IACEEEFS(1)DS(1)EEEGEGGRK;IACEEEFS(1)DS(1)EEEGEGGRK 134.66 2.6863e-06 15407820000.0 16053060.0 14550940.0 13220110.0 13811370.0 14738360.0 13980400.0 13342130.0 15190870.0 18203240.0 14115810.0 True False 15162564.760818278 13851891.000993779 14072299.443523875 15123998.452260202 15898185.082202658 13893143.137833921 14690882.70704056 15138176.41754571 14897990.4823377 13990754.905333996 1.0837560134112225 0.9900745953109882 1.0058284587745003 1.0809994567551287 1.1363350433750685 0.9930231236155198 1.0500421747392372 1.0820128377614748 1.0648453627514995 1.0 23.737970472947133 -5.2595391000472045 24.97654907537599 1.0617994656506389 1.0229051798201332 0.08920745008858 0.04483517529431452 342.51493398897657 4501832.948470768 0.012417517060227975 0.02012934228488231 5.5012438992992144e-06 5.2595391000472045 -0.03889428583050569 IACEEEFS(ph)DSEEEGEGGRK ddPTM_KYSE-520_SHP099_60min_R1 2 IACEEEFSDSEEEGEGGRK 19 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 IACEEEFS(0.998)DS(0.002)EEEGEGGRK;IACEEEFS(0.998)DS(0.002)EEEGEGGRK 210.38 1.1174e-18 710640000.0 237850.0 255370.0 208477.0 223100.0 263420.0 220420.0 234670.0 232810.0 311870.0 248200.0 True False 224655.98635777997 243101.6418818152 221915.76099499388 244303.35692253927 284149.65534522344 219044.27701935262 258392.73375849312 232002.43644826268 255242.26960292 246001.14109667813 0.9132314807819955 0.9882134724987985 0.902092404960761 0.9930984703299744 1.155074541843499 0.8904197600175704 1.0503720942373398 0.9430949605111223 1.0375653887825265 1.0 17.908305482077346 -5.504854641072333 24.489088211770735 1.0118927165543363 0.9411680173691551 0.20604748723175514 0.06840442911296804 969.4143284963253 1317128.6367968048 0.018770591073062434 0.027206809724090873 3.1271258450709667e-06 5.504854641072333 -0.0707246991851812 IACKS(ph)PPPESVDTPTSTK ddPTM_KYSE-520_SHP099_60min_R1 6 IACKSPPPESVDTPTSTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACKS(1)PPPESVDTPTSTK;IACKS(1)PPPESVDTPTSTK;IACKS(1)PPPESVDTPTSTK;IACKS(1)PPPESVDTPTSTK;IACKS(1)PPPESVDTPTSTK;IACKS(0.999)PPPES(0.001)VDTPTSTK 266.46 4.2050999999999994e-30 21120630000.0 8867850.0 8657300.0 7798460.0 6481940.0 6532530.0 8924000.0 7953580.0 11346490.0 13112070.0 9924010.0 True False 8375932.682879284 8241390.3131277785 8301161.209577176 7097981.628733672 7046602.945988666 8868302.00581028 8757605.485860465 11307131.674480665 10731248.616386198 9836090.992162947 0.851550955511995 0.8378725166017913 0.8439492087040726 0.7216262674256568 0.716402781511797 0.9016083739847702 0.8903542568727982 1.1495554162207113 1.091007456614267 1.0 23.22965365046954 -6.996618200437685 2.1402917635394005 1.089820187109149 0.8021308875912424 0.766786732523788 0.06545855555224747 0.15001619799494761 1.362526444973855 0.03861428156900417 0.02058738684184923 1.0078172778665887e-07 6.996618200437685 -0.28768929951790667 IACKS(ph)PQPDPVDTPASTK ddPTM_KYSE-520_SHP099_60min_R1 4 IACKSPQPDPVDTPASTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACKS(1)PQPDPVDTPASTK;IACKS(1)PQPDPVDTPASTK;IACKS(1)PQPDPVDTPASTK;IACKS(1)PQPDPVDTPASTK 180.63 2.1938e-09 6848400000.0 8071300.0 8131200.0 6974600.0 5728030.0 5708260.0 8378000.0 6746600.0 8963300.0 11526500.0 8553100.0 True False 7623568.899262352 7740564.946819974 7424193.875754569 6272420.249004979 6157467.586443413 8325709.794338687 7428612.16847083 8932208.404349951 9433578.15941918 8477326.18821111 0.8992893195337907 0.9130903748382712 0.8757706983221825 0.7399054972931964 0.7263454832027367 0.9821150690080481 0.8762918877418376 1.0536586897849252 1.1128011297403975 1.0 23.01517786910257 -7.088708426585424 1.6084146126136005 1.069747753505391 0.8427765868407556 0.5756013228182235 0.07695260796053233 0.30150980859094845 1.4786507107713684 0.05780126021931314 0.026011995195815475 8.152514378040118e-08 7.088708426585424 -0.22697116666463535 IACRS(ph)PQPDPVGTPTIFKPQSK ddPTM_KYSE-520_SHP099_60min_R1 1 IACRSPQPDPVGTPTIFKPQSK 22 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IACRS(1)PQPDPVGTPTIFKPQSK 145.34 5.0932e-07 1046600000.0 722070.0 645990.0 719800.0 587110.0 636970.0 691980.0 699280.0 896730.0 1096900.0 723900.0 True False 682015.3376891406 614955.6707492417 766199.4597207196 642908.7578789414 687095.9151364621 687661.0961430513 769970.0467151284 893619.4529283561 897730.6105987867 717486.8091856786 0.9505615001663977 0.8570968314347047 1.0678934440485786 0.8960565541387714 0.9576425745252249 0.9584302977270364 1.0731487141749914 1.2454855496822048 1.2512154914982734 1.0 19.452592782883897 -6.941500122046872 3.020135119395529 1.1850461273556934 0.9466396222206103 0.5820869571632047 0.08276034096081793 0.16277306791180965 3.007581378157279 0.038458703256125305 0.023359881552058617 1.1441945582716016e-07 6.941500122046872 -0.2384065051350831 IADDKYNDTFWK ddPTM_KYSE-520_SHP099_60min_R1 5 IADDKYNDTFWK 12 1 P14625 P14625 HSP90B1 Endoplasmin 0 ;;;; 187.57 1.0622999999999999e-07 35720300000.0 18095490.0 13967390.0 9166180.0 9608923.0 16020350.0 15716720.0 12491750.0 12835992.0 10869208.0 12653520.0 False True 17091697.097235024 13296375.61892019 9757046.62920655 10522152.152891954 17281060.401677374 15618626.120658718 13754537.99773151 12791466.939695062 8895633.817636244 12541419.65708959 1.3628199649290254 1.060197009786195 0.7779858178727757 0.8389921109883158 1.3779189975441493 1.2453634873648138 1.0967289488599605 1.0199377175345634 0.709300387106303 1.0 23.58019733103704 -7.568222165367132 7.042023353390513 0.8546867010990965 1.0965402546510556 0.2069952625907685 0.19587659283419193 0.3745194108128177 45.14415133362563 0.14416496583796065 0.05393825531669038 2.702575495337017e-08 7.568222165367132 0.24185355355195914 IADLQS(ph)PLFR ddPTM_KYSE-520_SHP099_60min_R1 3 IADLQSPLFR 10 0 Q9NZJ4-2;Q9NZJ4 Q9NZJ4-2 SACS Sacsin 1 IADLQS(1)PLFR;IADLQS(1)PLFR;IADLQS(1)PLFR 174.21 3.2937e-05 587680000.0 604450.0 570550.0 480060.0 499460.0 511720.0 730040.0 704190.0 792390.0 800150.0 858460.0 True False 570919.9535587983 543139.9215869902 511005.43572315783 546928.5282318759 551989.4527114788 725483.5495654126 775376.397432111 789641.3840352169 654862.9301400475 850854.7122717736 0.6709958178811136 0.6383462578902713 0.6005789570804378 0.6427989647863407 0.6487470125630174 0.8526526786557704 0.9112911831467252 0.9280566619028086 0.7696530567381709 1.0 19.698553279932508 -6.300026221710198 3.4014478851842194 0.8951039793835008 0.6354308101020006 0.8391621523734525 0.05546352267432886 0.09293338646359321 2.223981181445303 0.019619741265092416 0.017760020909206673 5.011569739988198e-07 6.300026221710198 -0.2596731692815002 IADMGHLK ddPTM_KYSE-520_SHP099_60min_R1 2 IADMGHLK 8 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 ; 93.429 0.0065065 2034210000.0 6775700.0 5864200.0 4118400.0 3868300.0 6076900.0 6070400.0 4205900.0 5331800.0 5002800.0 5156400.0 False True 6399838.413976926 5582475.029656347 4383878.653672985 4235942.068953195 6555117.457168737 6032512.381899457 4631073.417628357 5313305.230251473 4094417.630325103 5110718.307618495 1.2522385364962794 1.0923073223062616 0.8577813117068068 0.8288349726962488 1.2826215538815926 1.1803648760893068 0.9061492218666921 1.0396396182374177 0.801143280431167 1.0 22.285094644442083 -6.784784327240308 24.999295631705724 0.9400362933263589 1.070181439839045 0.17960149726917474 0.1510707054343243 523.2007587163845 560272.1366989871 0.06830398155786842 0.04608261821019927 1.6414047004210076e-07 6.784784327240308 0.13014514651268616 IADPEHDHTGFLT(ph)EYVATR ddPTM_KYSE-520_SHP099_60min_R1 1 IADPEHDHTGFLTEYVATR 19 0 B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361 B3KR49 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 1 IADPEHDHTGFLT(0.492)EY(0.492)VAT(0.015)R 171.78 2.9076999999999997e-10 1331100000.0 448940.0 387640.0 425650.0 568320.0 848810.0 1653200.0 1793200.0 1855300.0 1972300.0 2381000.0 True False 424036.40326029755 369017.19254049746 453088.0800640802 622332.9619283617 915606.5179317414 1642881.765576596 1974474.155945497 1848864.3973302755 1614180.0376369616 2359906.192389972 0.17968358429995848 0.15636943270477158 0.19199410617471183 0.26371088983757446 0.38798428551283637 0.696164013160533 0.8366748484802558 0.7834482587877174 0.6840017805971417 1.0 21.170298082104686 -6.148575507096345 1.5308020190496552 0.8177058272369442 0.17781462155524394 0.9373644295315178 0.07494439977215088 0.08824320602257862 0.4150503836950783 0.031245648862273098 0.030936390359348264 7.102716703590638e-07 6.148575507096345 -0.6398912056817002 down IADPEHDHTGFLTEY(ph)VATR ddPTM_KYSE-520_SHP099_60min_R1 1 IADPEHDHTGFLTEYVATR 19 0 B3KR49;E9PJF0;E9PQW4;P27361-2;P27361-3;P27361 B3KR49 MAPK3 Mitogen-activated protein kinase;Mitogen-activated protein kinase 3 1 IADPEHDHTGFLTEY(1)VATR 188.04 7.6126e-13 484770000.0 16643.0 24871.0 22348.0 64648.0 93053.0 235960.0 254720.0 256310.0 320600.0 341030.0 True False 15719.779613002029 23676.15982786791 23788.58783806428 70792.12648287005 100375.74170085453 234487.28611508224 280469.5834276362 255420.920433204 262387.1216683116 338008.73951732536 0.04650702119551639 0.0700459989930359 0.07037861764176351 0.20943874582639735 0.2969619715874523 0.6937314296959564 0.8297702119422865 0.7556636576851347 0.7762731876193467 1.0 18.366701023593095 -6.1583463505504445 1.3583606766511458 0.8402030584490733 0.06572313172816395 0.9633090238484368 0.06724431564377309 0.07263535996689809 0.2724576244266263 0.03000204585106043 0.029519535444315348 6.944702555355264e-07 6.1583463505504445 -0.7744799267209094 down IADREDEYKK ddPTM_KYSE-520_SHP099_60min_R1 6 IADREDEYKK 10 2 O75533;B4DGZ4;A0A494C1M2;O75533-2 O75533 SF3B1 Splicing factor 3B subunit 1 0 ;;;;; 190.56 2.1097e-06 11829710000.0 15859800.0 13942500.0 9440350.0 8916840.0 15702300.0 13939800.0 11328760.0 12412900.0 12249200.0 11312720.0 False True 14980025.278272526 13272681.371880831 10048890.066094058 9764293.792654289 16937981.676134318 13852796.537493728 12473981.618842917 12369842.547092637 10025054.057203613 11212498.101962978 1.3360113992483054 1.1837398991003776 0.8962222311845737 0.8708401735153782 1.5106340729876224 1.2354781612019636 1.1125069101825837 1.1032191430139053 0.8940963883372718 1.0 23.418604405138563 -7.614520392445308 4.066386367228439 0.9487814297684573 1.156443149071203 0.182854440934335 0.1794888346920014 0.43080370598879947 12.980832544982409 0.14766565288955305 0.05012486217455377 2.4292913711386348e-08 7.614520392445308 0.2076617193027458 IADTSNMLLFIPGCKT(ph)PDQLK ddPTM_KYSE-520_SHP099_60min_R1 2 IADTSNMLLFIPGCKTPDQLK 21 1 Q9BVC3 Q9BVC3 DSCC1 Sister chromatid cohesion protein DCC1 1 IADTSNMLLFIPGCKT(1)PDQLK;IADTSNMLLFIPGCKT(1)PDQLK 184.88 1.2465e-12 506090000.0 360970.0 451050.0 296760.0 303190.0 332710.0 512230.0 371350.0 488380.0 540160.0 479940.0 True False 340946.27452414524 429380.88096014754 315889.62443278794 332005.0864426025 358892.38413905265 509032.98256792896 408889.68202674604 486685.92376874894 442080.5603254991 475688.10498767043 0.7167433260349917 0.9026521295319689 0.6640687902863908 0.6979470013260219 0.7544699570495986 1.0700981950791535 0.8595751664577449 1.0231198103668444 0.9293496215066331 1.0 18.859656424290765 -6.242398754093208 23.570728802829787 0.9705701966003611 0.7484616999705188 0.6789567225162845 0.07876749130027243 237.17834062585655 293607.0413495085 0.025554495330988927 0.025503356676162447 5.722703509533373e-07 6.242398754093208 -0.22210849662984233 IADTSNMLLFIPGCKT(ph)PDQLKK ddPTM_KYSE-520_SHP099_60min_R1 3 IADTSNMLLFIPGCKTPDQLKK 22 2 Q9BVC3 Q9BVC3 DSCC1 Sister chromatid cohesion protein DCC1 1 IADTSNMLLFIPGCKT(1)PDQLKK;IADTSNMLLFIPGCKT(1)PDQLKK;IADTSNMLLFIPGCKT(1)PDQLKK 184.4 1.3042000000000001e-13 1699640000.0 2388270.0 2542689.0 1970168.0 1644660.0 1953988.0 2847910.0 1957000.0 2645536.0 3385610.0 2536677.0 True False 2255787.90220179 2420534.4037859994 2097168.181660255 1800967.9919149412 2107755.7389290975 2830135.137311426 2154832.6584794438 2636359.2530887476 2770868.5682827523 2514204.0152848447 0.8972175243090693 0.962743830282113 0.8341280854340923 0.716317363653125 0.838339182546529 1.125658506670863 0.8570635657963157 1.0485860483323042 1.102085809837842 1.0 21.261670291436452 -6.238461833827834 24.30024920080383 1.019114462955372 0.847745930814799 0.4968272085458384 0.0888536290485916 528.0828775265554 558481.8789770426 0.030896943211906676 0.030873261776959735 5.774816200649697e-07 6.238461833827834 -0.1713685321405729 IAGEASR ddPTM_KYSE-520_SHP099_60min_R1 4 IAGEASR 7 0 P62807;O60814;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;P57053;Q5QNW6-2;Q16778;P06899;P33778;P23527;Q6DRA6;Q6DN03 P62807;Q16778 HIST1H2BC;HIST1H2BK;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;H2BFS;HIST2H2BE;HIST1H2BJ;HIST1H2BB;HIST1H2BO;HIST2H2BD;HIST2H2BC Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-J;Histone H2B type 1-B;Histone H2B type 1-O;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 ;;; 139.27 0.012813 8134450000.0 5519160.0 6063250.0 3952750.0 3586430.0 5109970.0 6202830.0 5063750.0 5551350.0 6306530.0 6261590.0 False True 5213001.192627311 5771962.368876199 4207550.5896236105 3927283.2289005 5512095.567247863 6164115.837147031 5575643.267437544 5532093.662544833 5161423.126683886 6206117.1840433115 0.8399778860171342 0.930044051329972 0.6779682794971611 0.6328084231148627 0.8881713644434779 0.9932322665443264 0.8984108907535949 0.8913936844068179 0.8316670429547379 1.0 22.565259507447983 -5.976258817392037 24.976967053574686 0.9175177943824453 0.7732116903754104 0.40054545171825184 0.08876507705390588 265.1888851438873 278991.2328100971 0.029717434054988685 0.033694819449775835 1.056187887433135e-06 5.976258817392037 -0.14430610400703492 IAGYVTHLMK ddPTM_KYSE-520_SHP099_60min_R1 1 IAGYVTHLMK 10 0 H3BNC9;H0YN88;A0A075B716;P08708 H3BNC9 RPS17 40S ribosomal protein S17 0 112.75 0.0010850999999999999 342750000.0 378710.0 394570.0 350100.0 302850.0 527740.0 495800.0 287950.0 377370.0 342330.0 281910.0 False True 357702.20136033156 375614.2649383552 372668.0061798056 331632.7729448273 569270.1355701471 492705.528292328 317058.7961211835 376060.9915488203 280171.5014370334 279412.4967226613 1.2801939983213382 1.3443001631783909 1.3337556857727364 1.1868931305316621 2.0373825159838574 1.7633625341438348 1.1347337711809256 1.3458989700166852 1.0027164308084813 1.0 18.092037021156386 -7.4839597227716395 1.5462293776483813 1.0006653037683815 1.4699783884825026 0.3157977759752968 0.25683417497892524 0.545264114622642 2.305957236346288 0.2472499633830581 0.0828074433952313 3.281257226543514e-08 7.4839597227716395 0.46931308471412114 IAHFLDR ddPTM_KYSE-520_SHP099_60min_R1 3 IAHFLDR 7 0 P60228;H0YBR5;E5RIP5;E5RJ25;E5RII3;E5RHS5 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E 0 ;; 130.77 0.0034286 1917620000.0 3764330.0 3268390.0 2304503.0 2166043.0 3530200.0 3469450.0 2364385.0 2740160.0 2625020.0 2852980.0 False True 3555515.110894187 3111371.6384465885 2453054.950715167 2371903.075475426 3808006.6559096007 3447795.8756228643 2603400.1099738986 2730655.02451815 2148382.5393691557 2827704.8167848517 1.2573855268729457 1.1003169849900638 0.8675074343524767 0.8388085847561415 1.3466775716142 1.2192912977186448 0.9206760530733221 0.9656789521697497 0.7597619548605865 1.0 21.431200094850716 -6.86765046356252 8.64012104156052 0.906531005617862 1.092680428824727 0.257374349923311 0.1602226656433415 0.43527733819751774 32.31330736383467 0.07315976077565113 0.0492911851560009 1.3562805584998786e-07 6.86765046356252 0.1861494232068649 IAIS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 2 IAISPLK 7 0 Q6MZP7-3;Q6MZP7 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 IAIS(1)PLK;IAIS(1)PLK 119.75 0.0025484 376060000.0 902410.0 806760.0 663320.0 655490.0 672820.0 910080.0 752870.0 911930.0 865440.0 880850.0 True False 852351.5183902632 768002.0386285516 706078.6685495244 717787.5725197456 725767.1061778647 904399.853142965 828977.4469031265 908766.7276760628 708297.9119670106 873046.354290931 0.9762958337790945 0.8796807120880837 0.8087527828038248 0.8221643318157107 0.8313042057970871 1.0359127538852144 0.9495228321254531 1.0409146355283083 0.8112947365117567 1.0 19.735698730044398 -6.2484433565266215 24.87931822110773 0.9689607731348834 0.8591772981884385 0.3294874698745829 0.07395026747037654 850.8574382239766 1628864.8075876525 0.024305215317542116 0.0241533343060262 5.643605440690237e-07 6.2484433565266215 -0.10978347494644491 IAIS(ph)PLKSPNK ddPTM_KYSE-520_SHP099_60min_R1 1 IAISPLKSPNK 11 1 Q6MZP7-3;Q6MZP7 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 IAIS(0.592)PLKS(0.408)PNK 117.2 0.00039375 1784100000.0 1191100.0 1060300.0 957350.0 800530.0 802040.0 1079200.0 942180.0 1076700.0 1353500.0 1009200.0 True False 1125027.3086010176 1009361.5964572536 1019062.312814159 876612.1305118788 865155.9850166383 1072464.312491087 1037424.7491906803 1072965.1790036685 1107738.5189583898 1000259.2731457202 1.1247356948393128 1.0090999639352578 1.0187981658088556 0.876384907440065 0.864931731445793 1.0721863233702287 1.0371558425327847 1.0726870600552345 1.1074513865536657 1.0 19.93194257292329 IAIVNHDK ddPTM_KYSE-520_SHP099_60min_R1 2 IAIVNHDK 8 0 P61221;D6RGF4;D6R9I9 P61221 ABCE1 ATP-binding cassette sub-family E member 1 0 ; 107.66 0.0022405999999999997 318940000.0 943400.0 923930.0 659700.0 602930.0 844100.0 943980.0 701620.0 843680.0 836250.0 826690.0 False True 891067.7213787243 879543.0159527961 702225.3175573209 660232.2859224861 910525.8677279738 938088.2706683972 772546.5967513268 840753.470996393 684408.0801469915 819366.1697550878 1.0875085575537837 1.0734431667049367 0.857034795282333 0.8057841662169583 1.111256360511118 1.144895048509015 0.9428587916709381 1.0261022507772048 0.8352896487678569 1.0 19.64414880204374 -7.662881283215449 0.005429856879349813 6.299591749459033e-05 1.9616296881502562 0.013241894026381429 0.115125485043585 31380.16613480658 156.54955960496386 28353.66563646284 28187.598674107194 2.1732951798603777e-08 7.662881283215449 1.9615666922327617 IAIY(ph)ELLFK ddPTM_KYSE-520_SHP099_60min_R1 3 IAIYELLFK 9 0 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;A0A2R8Y6L3 P46783 RPS10 40S ribosomal protein S10 1 IAIY(1)ELLFK;IAIY(1)ELLFK;IAIY(1)ELLFK 135.83 0.00096849 3423600000.0 664769.6 722970.4 679414.3 592230.9 630454.0 644734.6 572004.1 625893.9 725923.8 559507.4 True False 627893.5051026567 688237.8167833051 723210.4328793158 648516.3466752875 680067.1430074311 640710.5722092433 629827.8566500471 623722.820145634 594114.3369698161 554550.5997261701 1.1322564711186 1.241073072724379 1.304137860884882 1.1694448567822602 1.226339207537129 1.1553690006387478 1.135744613676458 1.124735633598846 1.0713437822683487 1.0 19.080959578905833 -7.45302916026519 0.595671800841515 1.0015491825229117 1.2258403990788256 0.7124159066661674 0.04414542495029069 0.4062894205368009 0.31862352047066145 0.044048136435104614 0.023180138769285447 3.523472122498455e-08 7.45302916026519 0.22429121655591389 IALLEEENSRPHT(ph)NETSL ddPTM_KYSE-520_SHP099_60min_R1 1 IALLEEENSRPHTNETSL 18 1 D6REY2;P23508;P23508-2 D6REY2 MCC Colorectal mutant cancer protein 1 IALLEEENSRPHT(0.333)NET(0.333)S(0.333)L 99.74700000000001 0.0023989999999999997 156640000.0 197530.0 190640.0 173510.0 158340.0 172920.0 173860.0 140050.0 165150.0 214180.0 161430.0 True False 186572.61713370736 181481.368243526 184694.73222581594 173388.58599334332 186527.82021978605 172774.87524990752 154207.62075628332 164577.13319629966 175290.31103842464 159999.85579063962 1.1660799080834066 1.1342595738398353 1.1543431168306155 1.0836796391880685 1.1657999271190493 1.0798439435844496 0.963798498406552 1.0286080095700176 1.0955654314325922 1.0 17.287711079235557 -6.517342729763425 6.254698821773595 1.0236564967024162 1.1368975173519051 0.6883289529608004 0.037667669864560084 0.09012510982541205 15.723444262473125 0.014040462022779253 0.011487383451807116 3.0384862139880935e-07 6.517342729763425 0.11324102064948893 IALLEEENSRPHTNET(ph)SL ddPTM_KYSE-520_SHP099_60min_R1 4 IALLEEENSRPHTNETSL 18 1 D6REY2;P23508;P23508-2 D6REY2 MCC Colorectal mutant cancer protein 1 IALLEEENSRPHTNET(0.641)S(0.359)L;IALLEEENSRPHTNET(0.5)S(0.5)L;IALLEEENSRPHTNET(0.5)S(0.5)L;IALLEEENSRPHTNET(0.531)S(0.469)L 148.91 1.0490999999999998e-05 1717500000.0 1066540.0 1017000.0 1025780.0 1005600.0 974200.0 903390.0 901100.0 979570.0 1163740.0 990590.0 True False 1007376.900105222 968141.7934518793 1091903.420106031 1101171.9216553345 1050863.9975602343 897751.607914494 992191.981888516 976172.1003033555 952434.1514980672 981814.143267359 1.02603624831966 0.986074401240565 1.1121284283727144 1.1215686076702533 1.0703288445846642 0.9143803988470618 1.0105700642961006 0.9942534511213829 0.9700758112207278 1.0 19.90509042365729 -6.230897575838365 24.65263211453679 0.9795414135279349 1.0648989625437997 0.48745993683165456 0.04373615185401381 554.3355625362927 447446.72270247026 0.015620607747432553 0.015618728710358175 5.876279225625326e-07 6.230897575838365 0.08535754901586479 IALLEEENSRPHTNETS(ph)L ddPTM_KYSE-520_SHP099_60min_R1 2 IALLEEENSRPHTNETSL 18 1 D6REY2;P23508;P23508-2 D6REY2 MCC Colorectal mutant cancer protein 1 IALLEEENSRPHT(0.001)NET(0.164)S(0.835)L;IALLEEENSRPHTNET(0.237)S(0.763)L 149.94 2.2571e-06 537600000.0 668590.0 674590.0 688640.0 632480.0 680990.0 609060.0 612650.0 664600.0 750640.0 693310.0 True False 631501.9798988776 642181.6838197658 733030.8362629568 692590.7090379533 734580.0386969236 605258.6306206646 674582.6408878042 662294.6577188057 614342.6980945136 687167.8127870179 0.9189923744210738 0.9345339986388519 1.0667421008704228 1.0078916621966636 1.068996575549153 0.8808017770300595 0.9816854461675516 0.9638033758197556 0.8940213535364238 1.0 19.390302936087693 -6.264940199867906 24.99673396775844 0.9441515465294886 1.0000354372284015 0.19532942370374717 0.056183472668083025 552.7476381784559 3946742.3738425043 0.02004381935299413 0.018400556257381937 5.433251394387648e-07 6.264940199867906 0.055883890698912864 IAQATDRS(ph)DPLMDTLSSMNR ddPTM_KYSE-520_SHP099_60min_R1 2 IAQATDRSDPLMDTLSSMNR 20 1 H0YJY4;E9PCJ7;Q8N806 H0YJY4 UBR7 Putative E3 ubiquitin-protein ligase UBR7 1 IAQAT(0.002)DRS(0.998)DPLMDTLSSMNR;IAQATDRS(1)DPLMDTLSSMNR 125.11 2.6646999999999997e-05 263540000.0 172305.0 169120.0 136492.0 127566.0 120084.0 125121.0 133147.0 136443.0 157384.0 153896.0 True False 162746.89816849833 160995.2213457045 145290.49271492145 139689.83428588347 129533.9276155029 124340.07342772158 146606.79814949556 135969.7110790355 128807.03292777756 152532.60116927634 1.0669646811299471 1.0554807307523497 0.9525209142252953 0.9158031346417521 0.8492212590785745 0.8151704781440953 0.9611505804375257 0.891414097948413 0.8444557552967393 1.0 17.21875810084077 -4.905992675948054 1.9234155997914426 0.8885138943808065 1.0731461424011743 0.6079053541351798 0.052137924507354404 0.22503301420604968 1.6095032925008914 0.01497816716583241 0.046982878958170674 1.2416732473074196e-05 4.905992675948054 0.18463224802036782 IAQEIAS(ph)LSK ddPTM_KYSE-520_SHP099_60min_R1 1 IAQEIASLSK 10 0 Q15311 Q15311 RALBP1 RalA-binding protein 1 1 IAQEIAS(0.804)LS(0.196)K 170.66 4.418600000000001e-05 469610000.0 932780.0 803500.0 721580.0 875880.0 898210.0 967010.0 867760.0 937980.0 935930.0 948340.0 True False 881036.8339491702 764898.6539219109 768094.2013688218 959123.3718570763 968894.0168841885 960974.5318958537 955481.6493214727 934726.3663061777 765988.7048753039 939938.4453973566 0.9373346076686054 0.8137752612071867 0.8171750023950897 1.0204108328089605 1.030805816730468 1.0223802809657436 1.016536406187264 0.9944548718943232 0.8149349658226652 1.0 19.842206755240145 -5.262543403231341 24.999565801476713 0.9901144561258348 0.8518629837904008 0.43744597386369233 0.06713911791809621 88.73841518523265 2009414.8357345825 0.019065611426807464 0.030201874588608155 5.46331946938869e-06 5.262543403231341 -0.138251472335434 IAQEIASLS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 5 IAQEIASLSK 10 0 Q15311 Q15311 RALBP1 RalA-binding protein 1 1 IAQEIAS(0.002)LS(0.998)K;IAQEIAS(0.003)LS(0.997)K;IAQEIAS(0.185)LS(0.815)K;IAQEIAS(0.001)LS(0.999)K;IAQEIAS(0.009)LS(0.991)K 183.52 4.4902e-06 2591519000.0 5994820.0 5528560.0 4720840.0 5746460.0 5798710.0 6153660.0 6072660.0 6210040.0 6100970.0 5927770.0 True False 5662275.384222614 5262959.679062256 5025152.900011062 6292601.830663807 6255035.486853318 6115252.725355718 6686543.73625027 6188498.820674231 4993187.640937983 5875254.569535273 0.963749794533668 0.8957841088881618 0.8553081131271809 1.071034753675626 1.0646407594468006 1.0408489799003602 1.1380857896646288 1.053315860177908 0.8498674537149357 1.0 22.48621993304425 -5.265900514475276 24.957558933524513 1.0395946762895334 0.9040310141958832 0.3741074899791067 0.07421492929684202 367.71898663815495 2057183.7759960208 0.02124515879584886 0.0327509248645407 5.421250628737035e-06 5.265900514475276 -0.13556366209365023 IAQEIASLS(ph)KEDVSK ddPTM_KYSE-520_SHP099_60min_R1 4 IAQEIASLSKEDVSK 15 1 Q15311 Q15311 RALBP1 RalA-binding protein 1 1 IAQEIAS(0.04)LS(0.96)KEDVSK;IAQEIAS(0.012)LS(0.987)KEDVSK;IAQEIASLS(1)KEDVSK;IAQEIASLS(1)KEDVSK 193.27 2.5224000000000003e-11 4810300000.0 2819207.0 2626081.0 2195991.0 2557527.0 2501737.0 3034460.0 2659978.0 3042102.0 3042177.0 3120807.0 True False 2662819.9677601764 2499920.126932056 2337548.0935698296 2800593.59713147 2698609.468963609 3015520.8095642184 2928874.5351235727 3031549.6581939477 2489794.3438413558 3093159.0779311094 0.8608739158482694 0.8082093626442753 0.7557154464662459 0.9054153137848556 0.8724444495006708 0.9749000079172068 0.9468877808517304 0.9800820396930993 0.8049357569759005 1.0 21.56064960095398 -5.6107790625903515 1.9441366925964099 0.9364431085944835 0.8102485723477045 0.44626513597321293 0.05953170500610969 0.2988329139765358 2.3007447707255824 0.019284061910011162 0.028291261037153875 2.4503094638625944e-06 5.6107790625903515 -0.126194536246779 IAQVS(ph)PGPR ddPTM_KYSE-520_SHP099_60min_R1 8 IAQVSPGPR 9 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 IAQVS(1)PGPR;IAQVS(1)PGPR;IAQVS(1)PGPR;IAQVS(1)PGPR;IAQVS(1)PGPR;IAQVS(1)PGPR;IAQVS(1)PGPR;IAQVS(1)PGPR 172.6 7.0227e-05 10545970000.0 8531390.0 8325100.0 7897500.0 6047200.0 6505940.0 8124680.0 7281710.0 8537400.0 9843970.0 9096020.0 True False 8058136.789795678 7925149.699770144 8406585.486446781 6621924.06984303 7017920.464265067 8073970.858422986 8017816.309441157 8507785.752044138 8056553.194289467 9015436.339396471 0.8938155055881767 0.8790644624862034 0.9324657365402185 0.7345095479079526 0.7784338106407032 0.8955718341818484 0.8893431230171496 0.9436909575708547 0.8936398518043115 1.0 23.103965887875795 -6.928017118737297 1.7402386607795055 0.9412573282135218 0.8462631118128748 0.338738204067241 0.059331843229254624 0.49928015702905376 3.015833445087444 0.038561201750230825 0.02055106489193354 1.1802741114578715e-07 6.928017118737297 -0.09499421640064698 IAQVS(ph)PGPRDS(ph)PAFPDS(ph)PWR ddPTM_KYSE-520_SHP099_60min_R1 5 IAQVSPGPRDSPAFPDSPWR 20 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 3 IAQVS(1)PGPRDS(1)PAFPDS(1)PWR;IAQVS(1)PGPRDS(1)PAFPDS(1)PWR;IAQVS(1)PGPRDS(1)PAFPDS(1)PWR;IAQVS(1)PGPRDS(1)PAFPDS(1)PWR;IAQVS(1)PGPRDS(1)PAFPDS(1)PWR 174.15 2.4877e-08 835110000.0 1099700.0 1036600.0 1002050.0 984430.0 959560.0 912580.0 900850.0 993910.0 1160600.0 969300.0 True False 1038697.4488024005 986800.1800316785 1066643.7463366864 1077989.9312203287 1035071.9128504393 906884.2497156375 991916.709448751 990462.3581903386 949864.2963451084 960712.756103989 1.0811737870689524 1.0271542391437403 1.1102629163187996 1.1220730903916982 1.0773999889915082 0.9439702387145935 1.0324800031502699 1.0309661778688088 0.9887079049487438 1.0 19.87374561793351 -6.128574458383051 8.208631619488347 1.0033689484898192 1.084846912190966 0.6230628416510117 0.03277753624827078 0.2163801994726625 13.403661759333819 0.011292787665008781 0.011303757076211151 7.437475388681621e-07 6.128574458383051 0.0814779637011469 IAS(ph)DEEIQGTK ddPTM_KYSE-520_SHP099_60min_R1 8 IASDEEIQGTK 11 0 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-4;A0A3B3ISX8 Q8WX93-3 PALLD Palladin 1 IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK;IAS(1)DEEIQGTK 254.89 1.1369e-16 35071800000.0 26054300.0 24541600.0 22953890.0 24252200.0 26183500.0 30962300.0 35523800.0 42336600.0 47407500.0 38451500.0 True False 24609016.041040633 23362584.698307373 24433534.476922564 26557121.79631019 28243992.486263983 30769052.800817978 39114892.38287788 42189744.216036715 38799493.04582175 38110849.62481431 0.6457220524681635 0.6130166324892371 0.6411175483480609 0.6968388807322368 0.7411010975697081 0.8073567790728018 1.0263453260147166 1.107027123020805 1.0180694848786331 1.0 25.183698435464294 -6.504744347382922 1.4097968285719131 1.060797549142908 0.6467942760737363 0.9502272448434003 0.04006016826164213 0.08286761764641898 0.33420030306197646 0.021494562137845875 0.015875069910390345 3.127920112694844e-07 6.504744347382922 -0.41400327306917173 IAS(ph)HDFDPTDSSSK ddPTM_KYSE-520_SHP099_60min_R1 2 IASHDFDPTDSSSK 14 0 Q9NZN5 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 IAS(1)HDFDPTDSSSK;IAS(1)HDFDPTDSSSK 114.29 9.583799999999999e-05 1001960000.0 527170.0 469280.0 371210.0 443810.0 437700.0 408310.0 427610.0 455010.0 549650.0 472600.0 True False 497926.8292126589 446735.08439635905 395138.7905570001 485989.56896365824 472144.49982766825 405761.58583509567 470836.99187143333 453431.6765101325 449847.4155489312 468413.1316772361 1.0630078354757984 0.9537202400725723 0.8435689860831521 1.0375233658020786 1.0079659768227918 0.8662472471303153 1.0051746205011762 0.9680165773460282 0.9603646548895266 1.0 18.837421995920835 -10.854370774809002 0.8066446391786652 1.0269637587973255 0.9646262751363317 0.020463955521812904 0.06557312548419779 2181.800668002036 331.41185744410296 112.32773299785794 0.02192936516784822 1.3983929480403081e-11 10.854370774809002 -0.06233748366099379 IAS(ph)HDFDPTDSSSKK ddPTM_KYSE-520_SHP099_60min_R1 4 IASHDFDPTDSSSKK 15 1 Q9NZN5 Q9NZN5 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 IAS(1)HDFDPTDSSSKK;IAS(1)HDFDPTDSSSKK;IAS(1)HDFDPTDSSSKK;IAS(1)HDFDPTDSSSKK 174.23 1.4275e-08 2733710000.0 5973200.0 5536570.0 4958730.0 5031080.0 4955010.0 4853420.0 4832390.0 5386100.0 6684000.0 5073690.0 True False 5641854.688721008 5270584.866639003 5278377.670048523 5509232.330550636 5344941.096849658 4823128.005495263 5320895.140781538 5367416.876225196 5470354.089928242 5028741.0538710905 1.121921894223992 1.0480923177743946 1.0496419707245144 1.0955490194329387 1.062878569326046 0.9591124207484202 1.0580968643604245 1.0673480337774393 1.0878178119187905 1.0 22.261765835623294 -4.260816239706401 23.521797891190072 1.0493199327510705 1.1219219308402264 0.2506716074716405 0.038440292134849036 34.377067653229936 1296911.9611834362 0.009836056595979912 0.056703567216224396 5.485090029927966e-05 4.260816239706401 0.0726019980891559 IAS(ph)HDFDPTGLVQR ddPTM_KYSE-520_SHP099_60min_R1 4 IASHDFDPTGLVQR 14 0 Q9NZN5-2 Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 IAS(1)HDFDPTGLVQR;IAS(1)HDFDPTGLVQR;IAS(1)HDFDPTGLVQR;IAS(1)HDFDPTGLVQR 189.59 6.4589e-11 2670950000.0 2189360.0 1943350.0 1853510.0 1707370.0 1936410.0 1836200.0 1877250.0 2129660.0 2348540.0 2107780.0 True False 2067911.836419041 1849988.5489721799 1972990.2203208557 1869637.9314604923 2088794.450334233 1824739.5946961925 2067020.7501944508 2122272.706526382 1922104.3378755336 2089106.7090280256 0.9898545763519923 0.8855404757341967 0.9444181150702474 0.8949461142319326 0.9998505300411686 0.8734544706647215 0.9894280369987177 1.0158756837815082 0.9200603921136268 1.0 20.994454754718056 IAS(ph)PVSR ddPTM_KYSE-520_SHP099_60min_R1 3 IASPVSR 7 0 A0A087WU64;A6NMQ1;P09884 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit 1 IAS(0.999)PVS(0.001)R;IAS(1)PVSR;IAS(0.999)PVS(0.001)R 95.311 0.0062824 2476940000.0 1109340.0 991160.0 923220.0 806440.0 853850.0 910100.0 862470.0 924170.0 1108020.0 983270.0 True False 1047802.698785537 943543.1858385085 982732.2384042284 883083.8151349728 921043.137258064 904419.7283155472 949656.8844960476 920964.2699728996 906831.4989111727 974558.9927724849 1.0751557438351516 0.968174520820191 1.00838660942268 0.9061368492662738 0.9450871051303157 0.9280297396287923 0.9744478184890643 0.9450061790029604 0.9305044698539625 1.0 19.8943899929157 -2.9760158338774394 0.9556467430581185 0.9474667807480278 2.276792967331786 0.5968872124931341 0.029822775209865076 12.832650935876602 1.3232043716333004 0.009203855472863776 30.492269433917265 0.001056778979564825 2.9760158338774394 1.3293261865837582 IASEASFSSSEGS(ph)PLSR ddPTM_KYSE-520_SHP099_60min_R1 2 IASEASFSSSEGSPLSR 17 0 A0A087WX12;A0A087WTH3;A0A087X251;A0A087X0T6;Q2M2Z5-5;Q2M2Z5-2;Q2M2Z5;A0A087X032;Q2M2Z5-3;Q2M2Z5-4 A0A087WX12 KIZ Centrosomal protein kizuna 1 IASEASFSSSEGS(0.998)PLS(0.002)R;IASEASFSSSEGS(1)PLSR 304.24 1.5246999999999998e-38 993330000.0 636300.0 618830.0 525020.0 416700.0 461900.0 531120.0 456570.0 469020.0 642410.0 511540.0 True False 601003.1705673976 589100.4779172328 558863.6292617018 456303.0427145771 498248.90214850346 527805.0830710388 502724.5512937963 467393.07909009105 525764.5378382405 507008.1535720978 1.1853915293729758 1.1619151955777398 1.1022773999279087 0.8999915277490497 0.9827236478114177 1.0410189251443343 0.9915512161922414 0.9218650149846684 1.0369942458203 1.0 18.951649422895102 -5.042814934818899 4.416812187824918 0.9818055450333907 1.1674176287461906 0.7765126188517786 0.04230863780761167 0.09201400897104287 3.9829278224934788 0.01179712010291288 0.022567806157709862 9.061186414619123e-06 5.042814934818899 0.1856120837127999 IASEASR ddPTM_KYSE-520_SHP099_60min_R1 1 IASEASR 7 0 Q99880;Q96A08 Q99880 HIST1H2BL;HIST1H2BA Histone H2B type 1-L;Histone H2B type 1-A 0 115.46 0.020766 230110000.0 156290.0 144000.0 152940.0 116010.0 144330.0 163040.0 163960.0 145650.0 183720.0 174180.0 False True 147620.28214360937 137082.02385159352 162798.75711265192 127035.55552032181 155687.94987463395 162022.4068833827 180534.676895396 145144.77414496572 150361.0792043111 172636.90070998928 0.8550911278904095 0.7940482207907336 0.943012510321508 0.7358540091827028 0.9018231283946202 0.9385154982338467 1.0457479029855505 0.8407517370159044 0.8709672068134549 1.0 17.397381344407442 -5.987305542793495 24.87697895138032 0.9341547507904329 0.8349221997415242 0.32415891261933716 0.07286969377904759 281.13826668559864 550935.489539163 0.022612142545557087 0.025624038924735474 1.0296614593044e-06 5.987305542793495 -0.09923255104890871 IASLEVENQSLR ddPTM_KYSE-520_SHP099_60min_R1 1 IASLEVENQSLR 12 0 P29692-2;P29692;E9PRY8;P29692-3;A0A087X1X7;E9PK01;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;H0YCK7;E9PIZ1;E9PMW7;E9PN91 P29692-2 EEF1D Elongation factor 1-delta 0 166.86 1.4496e-05 0.0 117970.0 127620.0 78428.0 68946.0 128470.0 114510.0 91652.0 111480.0 94031.0 106620.0 False True 111425.96893263531 121488.94363847458 83483.59436923685 75498.60711062925 138579.85810568996 113795.30061467236 100917.07859732145 111093.30189962771 76957.3407286119 105675.42974910475 1.0544169935923944 1.1496422955356262 0.7900000460603198 0.7144386097116284 1.311372553058995 1.07683783150772 0.9549720198623218 1.0512689862098135 0.7282425149471783 1.0 16.68928045380946 -7.734555621850333 24.994231452127327 0.86412084093448 1.0102037304270286 0.10726190173369932 0.17151396197982402 460.7966379693331 428411.43418601603 0.12028807284518053 0.045438318680609824 1.8426564773917004e-08 7.734555621850333 0.14608288949254855 IATGS(ph)FLK ddPTM_KYSE-520_SHP099_60min_R1 6 IATGSFLK 8 0 E9PBS1;P22234;P22234-2;D6RF62 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 IATGS(1)FLK;IAT(0.003)GS(0.997)FLK;IAT(0.012)GS(0.988)FLK;IAT(0.001)GS(0.999)FLK;IAT(0.004)GS(0.996)FLK;IAT(0.005)GS(0.995)FLK 148.91 0.00044303 1778406000.0 2761410.0 2526611.0 2509953.0 2208038.0 2375314.0 2420761.0 2241989.0 2393263.0 2553524.0 2491477.0 True False 2608229.0825656387 2405228.815039573 2671748.5864467924 2417889.2676491705 2562237.6981120785 2405652.1326633003 2468631.127824053 2384961.329244784 2089868.4107016623 2469404.4521197765 1.056217858652799 0.9740116945909308 1.0819404590257866 0.9791386200723885 1.0375933743508936 0.9741831195769691 0.9996868377332602 0.9658042558388906 0.8463046257601445 1.0 21.235731717380578 -7.380490269150789 2.953497493751893 0.9198228787338814 1.0144761712687393 0.3585579237218489 0.048803871784306396 0.2643441224607429 4.338353682672686 0.030610140999997086 0.012421696634115997 4.1639905080288473e-08 7.380490269150789 0.09465329253485799 IATGS(ph)FLKR ddPTM_KYSE-520_SHP099_60min_R1 2 IATGSFLKR 9 1 E9PBS1;P22234;P22234-2;D6RF62 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 IAT(0.004)GS(0.996)FLKR;IAT(0.002)GS(0.998)FLKR 108.98 0.00068062 986650000.0 1162170.0 1120590.0 1108410.0 989770.0 1014160.0 968700.0 980270.0 966690.0 1169270.0 1025850.0 True False 1097702.1133715415 1066755.1743601186 1179859.8821187061 1083837.4432147979 1093968.6222189341 962653.983978981 1079365.258113256 963336.778017143 956960.0428980243 1016761.7670992239 1.0796060088915782 1.0491692438470848 1.1604093705104528 1.065969903950006 1.0759340659906773 0.9467842075980001 1.0615714447963922 0.9474557454746749 0.9411841336522603 1.0 19.955550256694135 -6.174417353744561 5.588207626796365 0.9814425383535647 1.0884458650355862 0.6115389223729919 0.04258472655248216 0.1627001435218377 8.14817163085799 0.014307034192582908 0.014293920658669218 6.692411645461927e-07 6.174417353744561 0.1070033266820215 IATS(ph)LDGFDVASVQQQR ddPTM_KYSE-520_SHP099_60min_R1 1 IATSLDGFDVASVQQQR 17 0 K7ERZ3;O60664-3;O60664;O60664-2;O60664-4 K7ERZ3 PLIN3 Perilipin-3 1 IAT(0.131)S(0.869)LDGFDVASVQQQR 121.79 0.00015406 0.0 166220.0 166610.0 177010.0 142270.0 125810.0 197470.0 126650.0 151050.0 226270.0 165530.0 True False 156999.44524864492 158605.80551329165 188420.34782601375 155791.2980249647 135710.53123901962 196237.51648222256 139453.01798488572 150526.0428053352 185185.07180252278 164063.5329803912 0.9569429744476453 0.9667340610801557 1.1484596509849245 0.9495790758302444 0.8271827917739628 1.1961068551758958 0.8499939959329846 0.9174862936989537 1.128739997478026 1.0 17.323895075659483 -10.526115734308224 13.223909519490984 1.000000005074596 0.9905652888650482 0.0 0.1189298703275546 1.7389683924637177e-08 6.291834207488476e-10 0.11167264429238115 0.02708458005360442 2.97772279601797e-11 10.526115734308224 -0.009434716209547833 IAVAAQNCYK ddPTM_KYSE-520_SHP099_60min_R1 1 IAVAAQNCYK 10 0 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 0 176.66 0.00078976 0.0 427190.0 563910.0 384080.0 295300.0 496140.0 630650.0 434070.0 516890.0 501220.0 543540.0 False True 403492.9191178474 536818.9171538336 408838.4113497284 323365.2232148178 535183.3953495522 626713.8794222603 477950.0317149579 515097.0292330327 410211.0827279814 538724.6584677214 0.7489780034674677 0.9964624947383913 0.7589004975427993 0.6002421053726331 0.9934265806056816 1.1633287423761223 0.8871879617955061 0.9561415486309981 0.7614484993033966 1.0 19.03918857606254 -5.818694442536475 24.99991569635461 0.964563249678496 0.7906476321433418 0.32073824671191453 0.13048700941546829 109.59857262775063 47854.39806046052 0.0424060245427099 0.04808393682396357 1.518118097280743e-06 5.818694442536475 -0.17391561753515428 IAVFS(ph)VTVLHDER ddPTM_KYSE-520_SHP099_60min_R1 2 IAVFSVTVLHDER 13 0 E7EPU2;A0A0U1RQW6;Q9Y2E4-2;Q9Y2E4 E7EPU2 DIP2C Disco-interacting protein 2 homolog C 1 IAVFS(0.5)VT(0.5)VLHDER;IAVFS(0.5)VT(0.5)VLHDER 73.435 0.030807 681480000.0 1379710.0 1195060.0 1037790.0 756400.0 1852850.0 1161980.0 867320.0 1014640.0 1146570.0 1126890.0 True False 1303174.7359163025 1137647.5237783694 1104687.6039227105 828288.0285800468 1998658.7537256011 1154727.6518054053 954997.1698274864 1011120.4506587574 938381.7906775904 1116906.6313071523 1.1667714197301833 1.0185699429924087 0.9890599383673266 0.7415911100918743 1.7894591165480909 1.0338622938015773 0.8550376039130702 0.9052864602257845 0.840161356710159 1.0 20.091077156953574 -6.528228264459855 23.384620556201725 0.89968854060997 1.1344447610714492 0.1687303680061475 0.25191614624078135 129.89021852364573 567776.2408562849 0.09875243299432515 0.07680999456376505 2.963273488511108e-07 6.528228264459855 0.23475622046147915 IAWALSR ddPTM_KYSE-520_SHP099_60min_R1 2 IAWALSR 7 0 Q04760-2;Q04760 Q04760-2 GLO1 Lactoylglutathione lyase 0 ; 154.09 0.0091987 295940000.0 321240.0 346570.0 270240.0 281460.0 428780.0 356660.0 305410.0 333210.0 295850.0 309140.0 False True 303420.1768239364 329920.2569878246 287660.1027992878 308209.8737759652 462522.5465755253 354433.9526436908 336283.82331436226 332054.172281799 242131.09777158426 306401.26010728074 0.9902706559290892 1.0767588125202525 0.9388345945397514 1.005902761849123 1.5095321292529331 1.1567640176140017 1.0975275467098884 1.0837232593806447 0.7902418471999969 1.0 18.225062704946374 -7.648886275480532 6.7057033087471325 0.8976236744824873 1.1140182146522468 0.2319980993763957 0.15486697064868246 0.32130784832259246 17.265428892952663 0.11477377301938395 0.042210653819402845 2.2444695845024356e-08 7.648886275480532 0.21639454016975956 IAY(ph)SLLGLK ddPTM_KYSE-520_SHP099_60min_R1 1 IAYSLLGLK 9 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 IAY(0.87)S(0.13)LLGLK 95.09899999999999 0.0085726 19488000.0 55282.0 71176.0 53668.0 66800.0 72498.0 77321.0 67448.0 84055.0 106500.0 71730.0 True False 52215.39725806517 67756.59812264596 57127.525151836104 73148.65191584767 78203.18014280613 76838.41095823138 74266.30206904527 83763.43282358439 87162.28464652257 71094.5280050956 0.7344502976983363 0.9530494121543305 0.8035432086663767 1.028892855306738 1.0999887380531033 1.0807921947625012 1.0446134766338462 1.1781980297777734 1.2260055322439911 1.0 16.11745090249241 -5.423914734440842 2.884133289616909 1.1093159289394323 0.8406904732589593 0.7067984243600183 0.07870375436741422 0.15029732649027902 2.41319287441725 0.023573445595665213 0.0367766910685427 3.7677776495554222e-06 5.423914734440842 -0.268625455680473 ICANHYITPMMELKPNAGSDR ddPTM_KYSE-520_SHP099_60min_R1 2 ICANHYITPMMELKPNAGSDR 21 1 P43487-2;P43487;F6WQW2;C9JXG8;C9JGV6;C9JJ34 P43487-2 RANBP1 Ran-specific GTPase-activating protein 0 ; 119.62 9.313e-05 2418700000.0 1142420.0 1126480.0 844750.0 686560.0 1256140.0 1166600.0 783960.0 806260.0 908700.0 812620.0 False True 1079047.685242192 1072362.209919048 899203.9366477879 751810.4559782086 1354991.0715410707 1159318.8166717032 863210.327512287 803463.2722424981 743702.9864628642 805420.8190087938 1.33973155371144 1.3314309546142233 1.116439897536309 0.9334380714213946 1.6823392685684682 1.439395145134739 1.071750701173348 0.9975695354278218 0.9233719428535709 1.0 19.6193832388642 -6.930709543485308 5.523134060086178 0.9816584021285517 1.2988765196348018 0.40831062688423425 0.18461759799947938 0.22999612858397617 12.892156719040022 0.08621087898701899 0.05720392201157579 1.1729795930110623e-07 6.930709543485308 0.31721811750625006 ICDDELILIK ddPTM_KYSE-520_SHP099_60min_R1 1 ICDDELILIK 10 0 P17987;F5H282;E7EQR6;E7ERF2;F5GZ03 P17987 TCP1 T-complex protein 1 subunit alpha 0 105.4 0.010607 0.0 53550.0 47395.0 50095.0 39598.0 58449.0 46670.0 42703.0 54717.0 69179.0 53965.0 False True 50579.47475072154 45118.07305865462 53324.203854833984 43361.382014427196 63048.60377068168 46378.715218642494 47019.83598111785 54527.19949804381 56617.83746067402 53486.91208413467 0.9456420791531256 0.8435348256351778 0.9969579805047496 0.8106914444083058 1.178766941555843 0.867103996313883 0.8790904942718673 1.0194493825381576 1.0585362896181858 1.0 15.706898295712495 -5.753815254782683 0.30428270902467247 1.0207374827582558 0.8714383577333711 0.09534418667713118 0.10213417958633392 8.041113393047054 1.2241565398953325 0.13227971232516164 0.4246148467247512 1.762725735636355e-06 5.753815254782683 -0.14929912502488474 ICDFENASKPQSIQESTGSIIEVLSK ddPTM_KYSE-520_SHP099_60min_R1 3 ICDFENASKPQSIQESTGSIIEVLSK 26 1 E7ER27;A0A2R8YD50;P51659-3;P51659;P51659-2;A0A2R8Y7L2;E7ET17 E7ER27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 0 ;; 203.04 8.5582e-16 221810000.0 327241.0 309957.0 88780.0 239919.0 142744.0 323328.0 209636.0 347062.0 196604.0 198435.0 False True 309088.28939123935 295066.2004650581 94502.90085302254 262720.8296257227 153977.14069773952 321309.9900195679 230828.05273019735 345858.1229268802 160905.66958352065 196677.02028009377 1.5715526346243056 1.5002576307330937 0.4804979286265272 1.3357983014567434 0.7828933979092014 1.6336936036654435 1.1736401761703936 1.7585080475305812 0.81812135121007 1.0 17.585468877581192 -6.267134116637191 24.990499152720528 1.3177523308658985 1.1294196449372058 0.026055676722583576 0.3977719087832942 1696.1882271673066 7443440.851215691 0.13558527182352942 0.12280594865653907 5.40587355698143e-07 6.267134116637191 -0.18833268592869268 ICDQWDALGS(ph)LTHSR ddPTM_KYSE-520_SHP099_60min_R1 2 ICDQWDALGSLTHSR 15 0 O43707;O43707-2;F5GXS2;O43707-3 O43707 ACTN4 Alpha-actinin-4 1 ICDQWDALGS(0.939)LT(0.061)HSR;ICDQWDALGS(0.915)LT(0.085)HSR 166.61 1.7277000000000002e-06 259880000.0 316320.0 299530.0 304600.0 276640.0 306910.0 291650.0 276730.0 291440.0 331180.0 300470.0 True False 298773.0990317134 285140.1291963041 324235.0033772315 302931.782425151 331062.07092097244 289829.7041679258 304704.5690245361 290429.0626626073 271046.060368407 297808.06956212304 1.0032404409692768 0.9574627363709618 1.0887381388085449 1.0172047482479623 1.1116625261623831 0.9732097071582779 1.023157530528146 0.9752222734918992 0.9101367225103567 1.0 18.18402332090057 -7.332800596447087 2.9444833342917436 0.951674738697006 1.026670841435666 0.265766340023716 0.04850379423629117 0.3528652346610895 5.92166427492805 0.0314977225946754 0.013358096135364535 4.647286034313638e-08 7.332800596447087 0.07499610273865998 ICDQWDALGSLT(ph)HSR ddPTM_KYSE-520_SHP099_60min_R1 1 ICDQWDALGSLTHSR 15 0 O43707;O43707-2;F5GXS2;O43707-3 O43707 ACTN4 Alpha-actinin-4 1 ICDQWDALGS(0.36)LT(0.639)HS(0.001)R 77.681 0.016007 187000000.0 68210.0 55595.0 68492.0 76190.0 77247.0 59380.0 68547.0 64507.0 66353.0 75262.0 True False 64426.25532673604 52924.1327502037 72907.10391107475 83431.07469264124 83325.89942469246 59009.38739410739 75476.39971425163 64283.24027304701 54304.96782301139 74595.23723295 0.8636778662629931 0.7094840731577725 0.9773694221709697 1.1184504237461999 1.117040477590786 0.7910610594323833 1.011812583671393 0.8617606519877383 0.7279951085003581 1.0 16.18679589957746 -9.979530555353891 14.074854017802245 0.9999999987406707 0.9153804026858536 0.0353778453583381 0.1391244404714882 0.0 0.0 0.14405041704159013 0.0349373576736229 1.04826103921584e-10 9.979530555353891 -0.08461959605481706 ICLTDHFKPLWAR ddPTM_KYSE-520_SHP099_60min_R1 1 ICLTDHFKPLWAR 13 1 Q9Y3C8 Q9Y3C8 UFC1 Ubiquitin-fold modifier-conjugating enzyme 1 0 72.652 0.017225 150470000.0 115690.0 111220.0 89968.0 72346.0 141960.0 138770.0 88330.0 82622.0 67637.0 65426.0 False True 109272.44507770278 105876.82425537647 95767.48123388964 79221.74208838188 153131.44435808944 137903.88495588224 97259.25841772572 82335.40356611973 55355.82579001742 64846.376540657766 1.6850971620471422 1.6327330824567075 1.47683627586878 1.221683404911776 2.3614495138688003 2.1266243746004596 1.4998410644694316 1.269699371937869 0.8536456274516757 1.0 15.984738341954372 -7.3601269223987025 2.3075050475566012 0.9472792640734778 1.7351556532575743 0.526377304451715 0.3065255093659507 0.28302736909608456 2.8248004240185187 0.24785350783618404 0.09546431212106288 4.363882792922228e-08 7.3601269223987025 0.7878763891840964 ICNGGLS(ph)PGNPGDSK ddPTM_KYSE-520_SHP099_60min_R1 1 ICNGGLSPGNPGDSK 15 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 ICNGGLS(1)PGNPGDSK 290.15 4.1933e-33 1116100000.0 936850.0 1093700.0 725200.0 668860.0 722120.0 987540.0 804540.0 930290.0 1117300.0 1055700.0 True False 884881.062935827 1041157.010322831 771947.5523610264 732428.2532999079 778946.7356992364 981376.3965506376 885870.7547537317 927063.0411213174 914426.484840936 1046347.319322171 0.8456857934218796 0.9950395925869984 0.7377546041414794 0.6999857884420047 0.7444437629025914 0.9379069248119047 0.8466316474415045 0.8859993464902968 0.8739225187993085 1.0 19.99693038141781 -6.269589949438906 24.894617133381768 0.8978757686074331 0.8056393665897796 0.26870243602991717 0.0850674490357848 1026.1847440419353 3134310.053317666 0.032465511187317726 0.029116127435343794 5.375390885186806e-07 6.269589949438906 -0.09223640201765348 ICPVPPVSTVTGDENIS(ph)DSEIEQYLR ddPTM_KYSE-520_SHP099_60min_R1 1 ICPVPPVSTVTGDENISDSEIEQYLR 26 0 Q9HAW0-2;Q9HAW0 Q9HAW0-2 BRF2 Transcription factor IIIB 50 kDa subunit 1 ICPVPPVSTVTGDENIS(0.896)DS(0.104)EIEQYLR 126.8 9.373799999999999e-05 81229000.0 40804.0 52848.0 49166.0 31304.0 41449.0 48327.0 41864.0 61322.0 56589.0 55845.0 True False 38540.520779242615 50309.10275353478 52335.319028381426 34279.122748109214 44710.80048745033 48025.373267009534 46096.02167326699 61109.28829466243 46313.864092601594 55350.25674675253 0.6963024752636552 0.9089226628833385 0.9455298331827884 0.6193128047255249 0.807779459669328 0.8676630622824932 0.8328059232710153 1.1040470611411897 0.8367416307480613 1.0 15.756302388632294 -7.10469611957399 8.150507422293673 0.977579340040893 0.8132017926125445 0.3397575562110563 0.10829373010441709 0.36408094072446723 25.538755154849962 0.05077762205725792 0.029266112485079168 7.857852645276913e-08 7.10469611957399 -0.16437754742834843 ICPVPPVSTVTGDENISDS(ph)EIEQYLR ddPTM_KYSE-520_SHP099_60min_R1 2 ICPVPPVSTVTGDENISDSEIEQYLR 26 0 Q9HAW0-2;Q9HAW0 Q9HAW0-2 BRF2 Transcription factor IIIB 50 kDa subunit 1 ICPVPPVSTVTGDENIS(0.334)DS(0.666)EIEQYLR;ICPVPPVSTVT(0.002)GDENIS(0.443)DS(0.555)EIEQYLR 128.71 6.9538e-05 126141000.0 88548.0 114816.0 86936.0 75840.0 80712.0 108231.0 80102.0 99230.0 125728.0 104459.0 True False 83636.0659239383 109300.06701767043 92540.03366251808 83047.81079787247 87063.57521153931 107555.49018274905 88199.49188018426 98885.79429045603 102898.96454495782 103533.5745278722 0.8078158829667634 1.0556968356988954 0.8938166588424458 0.8021341016823024 0.840921175653034 1.0388464869798746 0.8518926568737384 0.9551084731826298 0.9938704909416265 1.0 16.659739164385105 -6.242445183548055 24.954122804037013 0.9578847278557199 0.8862667575560431 0.22274247843155226 0.08057178729754864 1608.77843644199 2113575.9185052705 0.027386258212929723 0.027346958187666644 5.722091740761327e-07 6.242445183548055 -0.07161797029967676 ICRDPQT(ph)PVLQTK ddPTM_KYSE-520_SHP099_60min_R1 8 ICRDPQTPVLQTK 13 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 ICRDPQT(1)PVLQTK;ICRDPQT(1)PVLQTK;ICRDPQT(1)PVLQTK;ICRDPQT(1)PVLQTK;ICRDPQT(1)PVLQTK;ICRDPQT(1)PVLQTK;ICRDPQT(0.996)PVLQT(0.004)K;ICRDPQT(1)PVLQTK 198.89 3.9845000000000004e-08 15277120000.0 12750950.0 13076290.0 11444440.0 8774440.0 9015520.0 10234800.0 8886510.0 10775990.0 13156510.0 11478150.0 True False 12043629.385111362 12448085.400488548 12182166.914151417 9608360.139468424 9724990.132708095 10170920.81679372 9784845.154779844 10738610.605824968 10767619.432627425 11376462.520865578 1.0586444919079312 1.094196493651476 1.0708220496316931 0.8445824105556295 0.8548342786583688 0.8940319363896488 0.8600955821577624 0.9439323151752379 0.9464822138585282 1.0 23.439548689608024 -5.248641024653214 24.13839747081054 0.8993654322026656 1.0765185994516624 0.732830937149044 0.04642491766029821 239.38808964139074 451497.38964178076 0.012779680438887856 0.021932943987189906 5.641037351232067e-06 5.248641024653214 0.17715316724899677 ICTEQSNS(ph)PPPIR ddPTM_KYSE-520_SHP099_60min_R1 4 ICTEQSNSPPPIR 13 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ICTEQS(0.015)NS(0.985)PPPIR;ICTEQSNS(1)PPPIR;ICTEQS(0.01)NS(0.99)PPPIR;ICTEQS(0.006)NS(0.993)PPPIR 207.64 1.4530999999999999e-09 2232200000.0 4431230.0 4240250.0 3520550.0 3349940.0 3499290.0 4183000.0 3533030.0 4434160.0 4968360.0 4170090.0 True False 4185420.838461991 4036542.0252549886 3747490.286079159 3668317.2904038094 3774664.2147634462 4156892.345394932 3890183.151449994 4418778.933900724 4066231.066163358 4133146.2468809276 1.012647651077073 0.9766269529661958 0.9066919151257221 0.8875362910693275 0.913266550297365 1.0057452838819638 0.941215945210193 1.0691078103600493 0.9838101105742224 1.0 21.97880898213341 -6.812715495570418 1.6260569536122895 1.0154735287619845 0.9399563845038246 0.2845509365346004 0.04547753193123357 0.4828922456600591 2.5906961094088805 0.02761254328579453 0.016028280667666636 1.5391626088517776e-07 6.812715495570418 -0.07551714425815992 ICTEQSNS(ph)PPPIRR ddPTM_KYSE-520_SHP099_60min_R1 2 ICTEQSNSPPPIRR 14 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 ICTEQS(0.001)NS(0.999)PPPIRR;ICTEQSNS(1)PPPIRR 106.93 0.00043391 1587500000.0 1265570.0 1273970.0 1301040.0 942510.0 1203730.0 1276270.0 1051610.0 1060760.0 1339930.0 1179280.0 True False 1195366.309248752 1212766.5689320448 1384907.1201376012 1032085.8670240359 1298456.7027131803 1268304.3255216798 1157917.0015245634 1057080.4711432464 1096632.4888865256 1168832.4966659565 1.0227011249759757 1.0375879969040973 1.1848636345139172 0.8830057942160366 1.1109005836310775 1.0851035791180195 0.9906611980993607 0.9043900423358541 0.938228952407314 1.0 20.15663676391214 -6.97449319207179 4.967645460201707 0.941508524026465 1.0535710734319592 0.29049670822983165 0.0752910229176231 0.2245729205662714 14.501246733818453 0.03276018549592082 0.020947665675121477 1.0604905623160593e-07 6.97449319207179 0.1120625494054942 IDAHLNK ddPTM_KYSE-520_SHP099_60min_R1 1 IDAHLNK 7 0 A0AVT1;A0AVT1-2;H0Y8S8 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 0 68.422 0.051524 48146000.0 214270.0 197400.0 150820.0 144560.0 214290.0 209780.0 162610.0 189020.0 191960.0 181810.0 False True 202384.0159633446 187916.60769655928 160542.0985205322 158298.93893645107 231153.40385668477 208470.68520606015 179048.2057206656 188364.3337375996 157104.90291780725 180199.30484603948 1.1231120793515799 1.0428264851360742 0.8909140834793885 0.878465869064812 1.2827652362709168 1.156889508448301 0.9936120778803372 1.0453111009420166 0.8718396724784047 1.0 17.459233920121527 -7.713281811959601 12.666566230089296 0.9359858069653949 1.0496038973047528 0.13510380867149296 0.11711548406586678 1.9856944339170817 520.107450970717 0.08550358480584412 0.03224766077213064 1.9351658350391726e-08 7.713281811959601 0.11361809033935788 IDASKNEEDEGHS(ph)NS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 IDASKNEEDEGHSNSSPR 18 1 Q14103-3;Q14103;D6RAF8;D6RD83 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 2 IDASKNEEDEGHS(1)NS(0.648)S(0.352)PR;IDASKNEEDEGHS(1)NS(0.66)S(0.34)PR 143.31 3.9764e-06 1659050000.0 2358090.0 2554600.0 2512600.0 2296900.0 2168150.0 2068060.0 1653320.0 1854540.0 3037100.0 1854120.0 True False 2227282.046964129 2431873.1814672276 2674566.2163021425 2515196.685411832 2338771.069914004 2055152.4704320952 1820453.7204482548 1848107.0335928912 2485639.199060598 1837693.9392835302 1.2119983634666005 1.3233287270976977 1.4553926304751743 1.3686700661332336 1.2726662584662116 1.1183322894525878 0.9906185581468496 1.0056663920399176 1.3525860568652062 1.0 20.809465080757857 -6.1879476741227535 2.9134602392324322 1.083995153802008 1.344989883965128 0.5256590068226572 0.11209127757711411 0.21775793751894967 3.6266767128318818 0.041055294914864274 0.04004056186025459 6.487125888366269e-07 6.1879476741227535 0.2609947301631199 IDASKNEEDEGHS(ph)NSSPR ddPTM_KYSE-520_SHP099_60min_R1 1 IDASKNEEDEGHSNSSPR 18 1 Q14103-3;Q14103;D6RAF8;D6RD83 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDAS(0.001)KNEEDEGHS(0.713)NS(0.143)S(0.143)PR 60.768 0.016309 153590000.0 98611.0 125030.0 116170.0 113780.0 109070.0 91244.0 73416.0 90200.0 142280.0 85217.0 True False 93140.85125384507 119023.37112614396 123658.50407857192 124593.61699079552 117653.1884765906 90674.51235075666 80837.60575111226 89887.11725283824 116445.53858692247 84462.04367782273 1.1027539377229294 1.4091935968321356 1.4640718918697089 1.4751432899972579 1.3929711306225816 1.0735533785641176 0.9570879679334335 1.064230905845817 1.3786729934110944 1.0 16.366015535144612 -6.260738066403349 24.856146452367177 1.0901221547790327 1.3822672492065065 0.47767002969550965 0.14293768619455688 51.851676492381614 1837755.6438427477 0.04998206741239743 0.04718639130030627 5.486077438740162e-07 6.260738066403349 0.2921450944274737 IDASKNEEDEGHSNS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 5 IDASKNEEDEGHSNSSPR 18 1 Q14103-3;Q14103;D6RAF8;D6RD83 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDASKNEEDEGHS(0.003)NS(0.845)S(0.152)PR;IDASKNEEDEGHS(0.002)NS(0.713)S(0.285)PR;IDASKNEEDEGHSNS(0.635)S(0.365)PR;IDASKNEEDEGHSNS(0.523)S(0.477)PR;IDASKNEEDEGHSNS(0.582)S(0.418)PR 223.68 1.0406e-18 20454900000.0 13822690.0 15708280.0 14900700.0 14463580.0 11780090.0 11395410.0 9963340.0 9851440.0 18418470.0 9714120.0 True False 13055917.830850642 14953630.650191003 15861222.963962972 15838194.294566112 12707116.063456517 11324287.019277299 10970531.640027884 9817267.653983392 15074140.139844488 9628060.454271011 1.3560278202302969 1.5531301159993827 1.6473954478471236 1.6450036193468522 1.31980019483775 1.1761753130926635 1.1394331903224966 1.019651642260768 1.565646602598719 1.0 23.19881376979915 -5.951504538834364 3.9058187232838453 1.1828995491912377 1.5562212234336843 0.5324516098827226 0.16321526961004965 0.17396078482853697 5.589979198042824 0.052256813283890466 0.05853428957809169 1.1181381388029368e-06 5.951504538834364 0.37332167424244656 IDASKNEEDEGHSNSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 IDASKNEEDEGHSNSSPR 18 1 Q14103-3;Q14103;D6RAF8;D6RD83 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IDASKNEEDEGHSNS(0.258)S(0.742)PR;IDASKNEEDEGHS(0.009)NS(0.284)S(0.707)PR;IDASKNEEDEGHSNS(0.014)S(0.985)PR;IDASKNEEDEGHSNS(0.293)S(0.706)PR;IDASKNEEDEGHSNS(0.039)S(0.961)PR;IDASKNEEDEGHS(0.005)NS(0.219)S(0.776)PR;IDASKNEEDEGHS(0.001)NS(0.082)S(0.916)PR;IDASKNEEDEGHS(0.005)NS(0.168)S(0.827)PR;IDASKNEEDEGHS(0.003)NS(0.293)S(0.704)PR 244.19 6.7113e-24 107458300000.0 45848410.0 53855740.0 50851610.0 46926500.0 40344380.0 39125470.0 33252040.0 32819310.0 61142060.0 33891540.0 True False 43305107.30076061 51268429.4112862 54129586.146052696 51386380.451033354 43519253.1778784 38881273.42887382 36613480.711836934 32705467.473694574 50040203.1699039 33591287.322819114 1.289176770291347 1.5262418769065367 1.6114174376782988 1.5297532350338279 1.2955518125771577 1.1574808984013285 1.0899695614512754 0.973629475982518 1.4896780432678078 1.0 25.001583749413587 -5.990214104633914 2.7734099346513403 1.1377822632587558 1.5004202313207349 0.5331376170707877 0.15245907856190813 0.20914158716124992 3.265595133823081 0.0517775704263161 0.05666854591678562 1.0227886391654827e-06 5.990214104633914 0.3626379680619791 IDDIFER ddPTM_KYSE-520_SHP099_60min_R1 5 IDDIFER 7 0 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ;;;; 187.63 0.0007815000000000001 743850000.0 854010.0 903540.0 747130.0 564014.0 873680.0 886100.0 666106.0 726280.0 817410.0 754360.0 False True 806636.3628732729 860132.5821588098 795291.1952502669 617617.7209830082 942433.6454407964 880569.5212178931 733442.495048089 723760.7041950272 668988.9492292404 747676.9572831994 1.0788567910455762 1.1504067014238815 1.0636829014232045 0.826048890455603 1.2604823998659471 1.1777406173082818 0.9809617481233692 0.9680125850406363 0.8947566762791725 1.0 19.512055545628993 -6.921062393664991 7.539948892293415 0.9536090835093579 1.0894737825695802 0.26555137640502036 0.10805800407466422 0.3469662705107278 28.214623583092337 0.047866010841005946 0.03217663886866561 1.1993269873936835e-07 6.921062393664991 0.13586469906022225 IDDPTDSKPEDWDKPEHIPDPDAK ddPTM_KYSE-520_SHP099_60min_R1 9 IDDPTDSKPEDWDKPEHIPDPDAK 24 2 P27797;K7EJB9;K7EL50 P27797 CALR Calreticulin 0 ;;;;;;;; 154.71 1.8384e-07 47176400000.0 30061950.0 24495820.0 13744167.0 15086070.0 24255290.0 25068500.0 18923584.0 24686830.0 20196863.0 21590260.0 False True 28394353.706488393 23319004.03822457 14630137.99626472 16519845.557007646 26164043.329278134 24912038.19281209 20836564.547102235 24601197.14867942 16529621.80068378 21398987.093368106 1.3269017632749667 1.0897246648394638 0.6836836684105875 0.7719919398487518 1.2226767190016576 1.1641690367920607 0.9737173285907456 1.1496430668115003 0.7724487952893143 1.0 24.35103917345668 -7.019426543280704 0.009000103077404722 9.717734846031642e-07 2.013653243527538 0.020423869729145783 0.20185690877820125 13745.120330239468 96.92281457563793 10744.243193667151 10927.611806513338 9.562544225467912e-08 7.019426543280704 2.013652271754053 IDDRDS(ph)DEEGASDR ddPTM_KYSE-520_SHP099_60min_R1 10 IDDRDSDEEGASDR 14 1 Q8TDD1;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 IDDRDS(1)DEEGASDR;IDDRDS(1)DEEGASDR;IDDRDS(1)DEEGASDR;IDDRDS(0.999)DEEGAS(0.001)DR;IDDRDS(0.954)DEEGAS(0.046)DR;IDDRDS(0.91)DEEGAS(0.09)DR;IDDRDS(0.999)DEEGAS(0.001)DR;IDDRDS(1)DEEGASDR;IDDRDS(0.997)DEEGAS(0.003)DR;IDDRDS(0.996)DEEGAS(0.004)DR 300.29 1.1364e-35 13131280000.0 14990205.0 12571251.0 12613925.0 12799596.0 12796447.0 12643437.0 12861294.0 13810157.0 15283455.0 12495084.0 True False 14158668.446417172 11967309.232127557 13427038.788493577 14016065.755501123 13803454.577076212 12564524.619838178 14161439.111653414 13762252.78868188 12508364.83654761 12384387.276788244 1.1432675779571606 0.9663222705056708 1.084190803178414 1.1317528628784965 1.1145851844400643 1.014545519210915 1.1434913003888254 1.1112582706837775 1.0100107948006223 1.0 23.562019156566006 -7.777922183110364 20.578600968196998 1.0050040898338004 1.0861042658734958 0.27352045785478263 0.054415758959736306 47.55622618924296 59357.41840403 0.05134005824417311 0.013552690067770162 1.6675459766888582e-08 7.777922183110364 0.08110017603969544 IDDRDS(ph)DEEGASDRR ddPTM_KYSE-520_SHP099_60min_R1 1 IDDRDSDEEGASDRR 15 2 Q8TDD1;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 IDDRDS(1)DEEGASDRR 104.88 0.00044353 4265900.0 13304.0 11581.0 10092.0 9240.7 12155.0 10135.0 10920.0 11840.0 13397.0 11195.0 True False 12566.000599133511 11024.631376564597 10742.546467770917 10118.933349682233 13111.52934751041 10071.74370561264 12023.900168929747 11798.92980347678 10964.442510886978 11095.821009578205 1.132498495450333 0.9935841040557382 0.9681614779562204 0.9119589565249208 1.1816637395459237 0.9077060360759646 1.0836422251720175 1.063366991346709 0.9881596414922503 1.0 13.437728799912223 IDENS(ph)DKEMEVEES(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 3 IDENSDKEMEVEESPEK 17 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 2 IDENS(1)DKEMEVEES(1)PEK;IDENS(1)DKEMEVEES(1)PEK;IDENS(1)DKEMEVEES(1)PEK 172.32 1.4989e-08 1096010000.0 1768050.0 1450780.0 1210470.0 1416880.0 1557040.0 1508790.0 1582220.0 1813200.0 1681790.0 1525460.0 True False 1669972.741979706 1381082.3511348243 1288498.8330204776 1551539.8491994936 1679570.1896542679 1499373.0819527684 1742166.238579124 1806910.4324040608 1376419.3304758235 1511945.6111899219 1.104519057841912 0.9134471113996578 0.8522124231746745 1.0261876073560678 1.1108668044827505 0.9916845360414396 1.1522677969930515 1.1950895713649365 0.9103629920871047 1.0 20.527974812138524 -5.512616436301207 22.56566986322727 1.0707687335006573 0.9501985460528992 0.17700602952796007 0.09770615014859227 196.85713686374476 432866.6960964504 0.028036355753161116 0.03865675618933777 3.0717337092554744e-06 5.512616436301207 -0.12057018744775805 IDENS(ph)DKEMEVEES(ph)PEKIK ddPTM_KYSE-520_SHP099_60min_R1 3 IDENSDKEMEVEESPEKIK 19 2 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 2 IDENS(1)DKEMEVEES(1)PEKIK;IDENS(1)DKEMEVEES(1)PEKIK;IDENS(1)DKEMEVEES(1)PEKIK 188.23 5.4185e-13 2978510000.0 1875560.0 1876380.0 1740400.0 1693260.0 1825080.0 1599010.0 1605170.0 1839660.0 2098470.0 1670920.0 True False 1771518.9479638354 1786235.8882961997 1852588.9687384574 1854186.9213028161 1968703.4127152874 1589029.9854673562 1767436.2485495373 1833278.6488398698 1717440.7461238333 1656116.94875609 1.069682276541173 1.078568690235217 1.118634146054684 1.119599025114438 1.1887466124865043 0.9594914095051543 1.06721705244129 1.106974148303262 1.0370286635939592 1.0 20.659373123461577 -6.257419713524281 24.999971312063938 1.042895315360205 1.1134718912224675 0.416241398901641 0.047322854559846216 421.20367012030914 2619643.7949251994 0.016562205629379996 0.015978510926482465 5.52815595550934e-07 6.257419713524281 0.07057657586226251 IDENS(ph)DKEMEVEESPEK ddPTM_KYSE-520_SHP099_60min_R1 2 IDENSDKEMEVEESPEK 17 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 IDENS(1)DKEMEVEESPEK;IDENS(1)DKEMEVEESPEK 172.61 1.4538e-08 938570000.0 1275360.0 1120560.0 1082600.0 1023270.0 993720.0 1041050.0 983840.0 1107970.0 1302390.0 1051420.0 True False 1204613.2384328719 1066726.6156051483 1152386.1282212448 1120521.2731426551 1071920.110506627 1034552.4207921104 1083296.1485530988 1104126.710672141 1065908.8065801368 1042105.2367923817 1.1559420257215987 1.0236265762261703 1.105825100513178 1.0752477135530374 1.0286102330758993 0.9927523480992005 1.0395266334976911 1.0595155572489612 1.0228418099701935 1.0 19.991069544572305 -1.0000000000000002 0.42051171176776625 1.0246381449999875 2.996454731676035 0.5260768252963415 0.03290353762191062 70.53945389941137 0.904917955070511 0.02278477443453655 117.01946309669803 0.09999999999999995 1.0000000000000002 1.9718165866760473 IDEPLEGSEDR ddPTM_KYSE-520_SHP099_60min_R1 1 IDEPLEGSEDR 11 0 P61978;P61978-2;P61978-3;S4R359 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 125.71 0.006337300000000001 166580000.0 296490.0 397350.0 475610.0 293180.0 395100.0 407580.0 321800.0 367010.0 527180.0 343540.0 False True 280043.10866183805 378260.7095654909 506268.5816029059 321043.7390522191 426192.1221885114 405036.14203587576 354330.68446534756 365736.92797077785 431457.4011263265 340496.5028700759 0.8224551685592342 1.110909235123113 1.4868539833317582 0.9428694167079904 1.251678412541977 1.1895456741017583 1.0406294381253907 1.074128294675417 1.2671419456280253 1.0 18.377280455294105 -9.529044936572456 14.035538325245795 0.9999908099281476 1.136919092970485 0.04794351022847354 0.17486720924765262 0.0 0.0 0.1655271230915993 0.04014622425948708 2.9577064160017067e-10 9.529044936572456 0.1369282830423375 IDFDSVSSIMAS(ph)SQ ddPTM_KYSE-520_SHP099_60min_R1 1 IDFDSVSSIMASSQ 14 0 K7EK53;A0A087WVB9;K7ERF1;Q9UBQ5 K7EK53 EIF3K Eukaryotic translation initiation factor 3 subunit K 1 IDFDSVSSIMAS(0.704)S(0.296)Q 162.94 8.5635e-06 40639000.0 146340.0 147170.0 150720.0 125660.0 162820.0 175740.0 144370.0 144640.0 195720.0 170300.0 True False 138222.22847844227 140099.73229332632 160435.65236052632 137602.68861894336 175633.00768092493 174643.14147255683 158964.32851542017 144138.27759922974 160182.1816996938 168791.27449139522 0.8188943942448202 0.8300176221518396 0.9504973100295249 0.8152239446829829 1.040533689967952 1.0346692505213588 0.9417804859547049 0.8539438903672579 0.9489956289645749 1.0 17.36488080162553 -4.841399318825122 1.070134879819594 0.9558263210720164 0.7995585497929195 0.3566150912057233 0.06704425930519917 0.9928706822144343 1.708919922109719 0.024619484705197762 0.14314825020486857 1.4407899855128773e-05 4.841399318825122 -0.15626777127909686 IDFDSVSSIMASS(ph)Q ddPTM_KYSE-520_SHP099_60min_R1 12 IDFDSVSSIMASSQ 14 0 K7EK53;A0A087WVB9;K7ERF1;Q9UBQ5 K7EK53 EIF3K Eukaryotic translation initiation factor 3 subunit K 1 IDFDSVSSIMAS(0.047)S(0.953)Q;IDFDSVSSIMAS(0.03)S(0.97)Q;IDFDSVSSIMAS(0.031)S(0.969)Q;IDFDSVSSIMAS(0.016)S(0.984)Q;IDFDSVSSIMAS(0.162)S(0.838)Q;IDFDSVSSIMAS(0.008)S(0.992)Q;IDFDSVSSIMAS(0.087)S(0.913)Q;IDFDSVSSIMAS(0.015)S(0.985)Q;IDFDSVSSIMAS(0.116)S(0.884)Q;IDFDSVSSIMAS(0.035)S(0.965)Q;IDFDSVSSIMAS(0.129)S(0.871)Q;IDFDSVSSIMAS(0.165)S(0.835)Q 285.65 1.1365e-32 1498050000.0 1456218.4 1615975.2 1316775.8 1160084.4 1311981.3 1554388.7 1263586.7 1402751.9 1712568.0 1521019.0 True False 1375439.0624525899 1538341.3257637734 1401657.2749837707 1270338.4725839063 1415226.7641575378 1544687.1835520864 1391322.3750537902 1397886.0810636545 1401608.8215260645 1507543.954994876 0.9123707855385649 1.0204288376911717 0.9297621275583535 0.8426543507238726 0.9387631846279056 1.0246382391930566 0.9229066724349799 0.9272605793231454 0.9297299868983445 1.0 20.52376863627783 -6.00915017055701 24.99334111561801 0.9570652834972537 0.9279535565425111 0.09380143291313925 0.05028475870629177 1443.812481740006 3943731.3205158957 0.017055339326762013 0.018358825706079055 9.791513554347256e-07 6.00915017055701 -0.029111726954742623 IDFIPVS(ph)PAPS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 1 IDFIPVSPAPSPTR 14 0 Q96E09 Q96E09 FAM122A Protein FAM122A 2 IDFIPVS(1)PAPS(0.589)PT(0.411)R 82.102 0.0072646 189920000.0 46384.0 44332.0 33662.0 37682.0 33965.0 35149.0 37757.0 41166.0 52989.0 36406.0 True False 43810.98705578841 42202.224176311385 35831.906381104316 41263.285950493584 36637.85226558541 34929.622053140454 41573.84603280959 41023.20475421665 43367.533343986725 36083.47116343941 1.214156666284886 1.1695721840384257 0.9930282543717693 1.1435509007321467 1.0153638517656725 0.96802277959699 1.1521576137867011 1.1368974056958878 1.2018670029708143 1.0 15.139050509423242 -4.565152150434526 10.02517461466008 1.08028904934476 1.2030994275092688 0.27530534688123387 0.07625997942065675 0.4740873133013106 109.09792009772903 0.020052843008050485 0.053338142671616066 2.7217476058159145e-05 4.565152150434526 0.12281037816450868 IDFSSIAVPGTS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 4 IDFSSIAVPGTSSPR 15 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 IDFSSIAVPGT(0.044)S(0.563)S(0.393)PR;IDFSSIAVPGT(0.075)S(0.462)S(0.462)PR;IDFSSIAVPGT(0.087)S(0.456)S(0.456)PR;IDFSSIAVPGT(0.071)S(0.464)S(0.464)PR 130.47 4.4223999999999995e-05 3765840000.0 5220430.0 4949320.0 4219970.0 3600930.0 3965660.0 5382410.0 4669320.0 5646190.0 7036300.0 6019790.0 True False 4930842.341230797 4711547.23811922 4491996.018390729 3943161.3045409187 4277734.880481132 5348816.382686387 5141340.433771704 5626604.684720651 5758685.29068852 5966459.3439257555 0.8264268734606758 0.7896722271167208 0.7528746547085541 0.6608879868686801 0.7169637189996351 0.8964808229409675 0.861707109260021 0.9430391393597447 0.9651763229646805 1.0 22.508443621032413 -6.732092224673844 1.3460675547574992 0.9667624608962322 0.7493655026117246 0.7611847094055364 0.05196125995572988 0.2340627533321067 0.8590432981576257 0.034908131601290436 0.020871476954896575 1.853138058201122e-07 6.732092224673844 -0.21739695828450756 IDFSSIAVPGTSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 IDFSSIAVPGTSSPR 15 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 IDFSSIAVPGT(0.006)S(0.312)S(0.682)PR;IDFSSIAVPGT(0.081)S(0.427)S(0.492)PR 137.27 0.00010921 1140550000.0 1745430.0 1641370.0 1445560.0 1337360.0 1337050.0 1776680.0 1591030.0 1747500.0 2303610.0 1855510.0 True False 1648607.51847156 1562516.1214533998 1538743.1105777766 1464462.2923080537 1442268.2282261436 1765591.0810940173 1751866.839356437 1741438.3303695647 1885332.493282403 1839071.6249649352 0.8964346445739944 0.8496222225619905 0.8366955857997728 0.7963051968331989 0.7842371165145038 0.9600447623282106 0.9525821700336653 0.9469116410312556 1.0251544679878086 1.0 20.81054623774693 -6.329706018193289 6.609908888194631 0.9731164006375201 0.83196986493312 0.8036939694152425 0.03564288440779989 0.11750097762341755 9.429333788711393 0.013453900648913612 0.01186648201984572 4.680518668689321e-07 6.329706018193289 -0.14114653570440017 IDFTPVS(ph)PAPS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 6 IDFTPVSPAPSPTR 14 0 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 2 IDFT(0.01)PVS(0.99)PAPS(0.992)PT(0.008)R;IDFTPVS(1)PAPS(0.998)PT(0.002)R;IDFT(0.001)PVS(0.999)PAPS(0.999)PT(0.001)R;IDFTPVS(1)PAPS(1)PTR;IDFT(0.001)PVS(0.999)PAPS(0.99)PT(0.01)R;IDFT(0.095)PVS(0.905)PAPS(0.998)PT(0.002)R 218.21 6.9806e-14 2128730000.0 2661570.0 2232850.0 2097820.0 2212590.0 2365090.0 2283630.0 2311060.0 2414950.0 2707000.0 2305340.0 True False 2513927.4063917464 2125580.5344238225 2233048.833830675 2422873.888360558 2551209.1274786806 2269377.0181004596 2544684.498572049 2406573.1021035695 2215477.0379167795 2284916.4811273776 1.100227263077631 0.9302661834602642 0.9772999811042936 1.0603774397763162 1.1165437111381482 0.9931991111468325 1.1136881893015635 1.0532433557117005 0.9696096361577572 1.0 21.12371000179988 -5.26629408317687 24.941251305503542 1.0498607801274038 0.9953646457700942 0.07984150378475874 0.06028249576129327 745.8398279942475 3831795.570735299 0.016487369736443443 0.025300192803194496 5.416339978993922e-06 5.26629408317687 -0.0544961343573096 IDFYFDENPYFENK ddPTM_KYSE-520_SHP099_60min_R1 3 IDFYFDENPYFENK 14 0 Q01105;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105-2 Q01105;Q01105-2 SET;SETSIP Protein SET;Protein SETSIP 0 ;; 253.54 3.0073e-18 1184550000.0 1671140.0 1844920.0 1338350.0 1046220.0 1670210.0 1802280.0 1451960.0 1347420.0 1496500.0 1482160.0 False True 1578438.532865001 1756287.2739186226 1424622.1824357137 1145652.434242486 1801646.0248050496 1791031.301998178 1598738.286564034 1342746.1145101918 1224773.3236950326 1469029.2155030307 1.074477291674901 1.1955427811673764 0.9697711709211236 0.7798704220121226 1.2264194651759346 1.2191937934909525 1.088295773625297 0.9140363583922348 0.8337297248888552 1.0 20.486431657282502 -7.2723963217591265 8.725900277944127 0.9050850712406249 1.078944746570871 0.2455884541419211 0.13063736706634294 0.292147081938497 185.76838867458562 0.0739897448914624 0.03752377034270752 5.340767574177304e-08 7.2723963217591265 0.17385967533024616 IDGATQS(ph)SPAEPK ddPTM_KYSE-520_SHP099_60min_R1 1 IDGATQSSPAEPK 13 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2;Q32MZ4-3 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 IDGAT(0.01)QS(0.495)S(0.495)PAEPK 158.52 1.2609999999999999e-06 572030000.0 537810.0 563590.0 404190.0 370940.0 409540.0 536210.0 414920.0 510820.0 622730.0 516260.0 True False 507976.6072023443 536514.2904341631 430244.7341268653 406194.0260728219 441768.46803615073 532863.3144929997 456864.16282896814 509048.08464628377 509657.92974581197 511686.33804420254 0.9927499904413359 1.0485218199978905 0.8408368606661883 0.7938340265745621 0.863357950350412 1.0413866364494722 0.8928598026971388 0.9948440026599051 0.9960358365123766 1.0 18.964900188537154 -6.251607338839617 24.962503741785106 0.9789426665004373 0.9056163713253701 0.1997665852749444 0.0766744028014995 1363.880931333928 3462749.7763184514 0.0283611665019665 0.02803073949662515 5.602639272043695e-07 6.251607338839617 -0.07332629517506717 IDGATQSS(ph)PAEPK ddPTM_KYSE-520_SHP099_60min_R1 6 IDGATQSSPAEPK 13 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2;Q32MZ4-3 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 IDGAT(0.003)QS(0.225)S(0.772)PAEPK;IDGAT(0.003)QS(0.211)S(0.787)PAEPK;IDGATQS(0.22)S(0.78)PAEPK;IDGATQS(0.404)S(0.595)PAEPK;IDGATQS(0.481)S(0.519)PAEPK;IDGATQS(0.39)S(0.61)PAEPK 254.16 1.1936e-16 14864100000.0 16497400.0 16488300.0 13367600.0 11248370.0 12181310.0 15020300.0 12727400.0 14945300.0 18273800.0 15157700.0 True False 15582256.33524843 15696177.318557134 14229296.884916212 12317411.702854235 13139909.794827 14926552.736202607 14014009.799453897 14893458.242559249 14955738.565010581 15023414.57051215 1.0371980525541225 1.0447809480918857 0.9471413318278106 0.8198809694721972 0.8746287159390462 0.9935526085727766 0.9328112283448861 0.9913497475994586 0.9954952980107197 1.0 23.840709414752315 -9.37544389919093 13.379471545673324 1.0000132106810984 0.9563135956201991 0.02980570349777123 0.06666410021260956 0.0 0.0 0.07187704228752369 0.017432743376967496 4.2126570103117706e-10 9.37544389919093 -0.043699615060899255 IDGDKDGFVTVDELK ddPTM_KYSE-520_SHP099_60min_R1 1 IDGDKDGFVTVDELK 15 1 O43852;O43852-3;O43852-5;O43852-6;O43852-10;O43852-13;O43852-14;O43852-11;O43852-9 O43852 CALU Calumenin 0 180.1 8.2943e-09 142780000.0 255380.0 256120.0 152510.0 152760.0 245280.0 283570.0 213520.0 236160.0 194550.0 238810.0 False True 241213.56231259138 243815.61075604253 162341.03862462792 167278.2644710311 264582.14054770506 281800.13444504904 235104.68535438468 235340.81608015855 159224.6242063942 236694.32919136836 1.0190931195380233 1.0300864054876304 0.6858678836085443 0.7067269631786823 1.1178220511307193 1.1905656354665448 0.9932839800496511 0.9942815989050777 0.6727014743038495 1.0 17.852665616312066 IDGDKDGFVTVDELKDWIK ddPTM_KYSE-520_SHP099_60min_R1 3 IDGDKDGFVTVDELKDWIK 19 2 O43852;O43852-3;O43852-5;O43852-6;O43852-10;O43852-13;O43852-14;O43852-11 O43852 CALU Calumenin 0 ;; 114.88 2.7130999999999998e-05 3494798000.0 1099347.0 910294.0 698043.0 513444.0 945119.0 887452.0 655704.0 652204.0 852710.0 657087.0 False True 1038364.0304160867 866562.10986085 743039.9686882887 562241.5633874328 1019494.488308489 881913.0828843944 721988.959374352 649941.6565495576 697879.359069825 651265.7203859502 1.5943784509351053 1.3305814857679166 1.1409167493844934 0.8633059376351634 1.5654048054368972 1.3541524684605832 1.1085935230039285 0.9979669376186299 1.0715739171044514 1.0 19.312886766317977 -4.419556048190287 2.534957261743555 1.1506353113476295 1.619765974961406 0.3637971514618683 0.18745280026691877 0.44571716435871056 4.505805940421649 0.052604215735092705 0.3819685055531179 3.8057823863029554e-05 4.419556048190287 0.4691306636137764 IDHYLGK ddPTM_KYSE-520_SHP099_60min_R1 2 IDHYLGK 7 0 P11413;P11413-3;P11413-2;E7EM57;E7EUI8;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 108.24 0.005636199999999999 8148700000.0 25006700.0 21967400.0 13847000.0 12277600.0 21208000.0 21117600.0 15336200.0 17406500.0 17290500.0 16726400.0 False True 23619528.50137943 20912053.13026038 14739599.775983343 13444459.41260497 22876948.94298646 20985797.225223996 16886532.76288831 17346120.91420766 14150981.058034724 16578217.108942281 1.4247327288673926 1.2614174969985423 0.8890943868766691 0.810971368287428 1.3799402428290461 1.2658657494540995 1.0185976363996176 1.0463200475792522 0.8535888367876237 1.0 23.98278552590688 -4.5586552524626205 5.6167974329776955 1.0472965807693466 1.389214558261599 0.3678649163213362 0.16779262606291392 0.18414427091700433 15.21929279011021 0.04649754565454111 0.134484665604988 2.7627701020190473e-05 4.5586552524626205 0.3419179774922523 IDIFPAKENGDLS(ph)PFSGTSLR ddPTM_KYSE-520_SHP099_60min_R1 1 IDIFPAKENGDLSPFSGTSLR 21 1 V9GY71;V9GYH5;P19174 V9GY71 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 1 IDIFPAKENGDLS(0.998)PFS(0.001)GTSLR 120.08 5.9699e-05 437630000.0 252640.0 244270.0 227020.0 165850.0 224080.0 220770.0 170640.0 174090.0 280090.0 205550.0 True False 238625.555574646 232534.9025432551 241654.07244484322 181612.33413537923 241713.82115920435 219392.0925395266 187889.95648591308 173486.12242291155 229232.71649431498 203728.98691548032 1.171289167965298 1.1413933091402713 1.1861545875408326 0.8914408150015665 1.1864478630106896 1.0768820670106427 0.9222544093043653 0.8515534536815057 1.125184589414442 1.0 17.636291738510927 -5.210672516831101 0.5452806758659287 0.9750708432402251 1.218668247107538 0.2721275228271999 0.10437100955059166 2.262393556157738 1.0246766349849732 0.0726985626927876 0.31376464652787267 6.156409266075738e-06 5.210672516831101 0.243597403867313 IDIIPNPQER ddPTM_KYSE-520_SHP099_60min_R1 3 IDIIPNPQER 10 0 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ;; 116.3 0.0044003 1556570000.0 725590.0 1006190.0 669210.0 568430.0 814090.0 893310.0 575580.0 734330.0 779570.0 793320.0 False True 685340.0762721957 957851.1220780187 712348.3473738582 622453.416295289 878154.2514615166 887734.5209334806 633765.2435194681 731782.7806239098 638019.7393604666 786291.8019936201 0.8716103544950307 1.218187852969362 0.9059592705503473 0.7916315733129562 1.1168299723270443 1.1290140869873695 0.806017870099338 0.9306758365895406 0.8114287059114517 1.0 19.584705287129264 -6.775471608651738 24.96913251109775 0.8812536105037357 1.006014020387447 0.1620915278820918 0.13173508105402754 444.19941762416386 790406.9095452362 0.05580804508262239 0.03783447589511379 1.6769819623376118e-07 6.775471608651738 0.12476040988371129 IDINMS(ph)GFNETDDLKR ddPTM_KYSE-520_SHP099_60min_R1 2 IDINMSGFNETDDLKR 16 1 P13797;A0A0A0MSQ0;P13797-3;P13797-2;H7C4N2 P13797 PLS3 Plastin-3 1 IDINMS(1)GFNETDDLKR;IDINMS(1)GFNETDDLKR 183.09 1.5227e-10 325710000.0 325090.0 322450.0 254190.0 245530.0 298490.0 274850.0 243550.0 262480.0 294630.0 270890.0 True False 307056.60964915185 306959.01799268223 270575.49411837966 268865.0973787138 321979.46482421894 273134.5591995693 268170.4108189417 261569.51814329225 241132.61901788702 268490.1253492311 1.1436420957744962 1.1432786125501404 1.0077670222189217 1.0013965952341632 1.1992227438734033 1.0172983413982062 0.9988092130767433 0.9742239786400446 0.8981060987037807 1.0 18.034509503535148 -6.666445595612765 2.524118812608408 0.9604231492096215 1.0916985366814802 0.4844653720230092 0.0632234821681763 0.2694067734203656 3.492681863135675 0.02935923770999108 0.020900805440511767 2.1555316516795357e-07 6.666445595612765 0.13127538747185874 IDINMSGFNETDDLKR ddPTM_KYSE-520_SHP099_60min_R1 2 IDINMSGFNETDDLKR 16 1 P13797;A0A0A0MSQ0;P13797-3;P13797-2;H7C4N2 P13797 PLS3 Plastin-3 0 ; 164.2 1.3607e-07 900800000.0 201654.0 233020.0 128975.0 160757.0 240160.0 240480.0 173842.0 216190.0 208129.0 160993.0 False True 190467.85063271705 221825.36942984906 137288.9348672964 176035.29694664574 259059.2256765199 238979.0751184734 191415.64589442158 215440.08734912527 170338.02010512791 159566.72727065877 1.1936564338356295 1.3901730844776088 0.8603857283757249 1.1032080431658713 1.6235165695734357 1.4976748549408712 1.199596238943601 1.3501567089465558 1.0675033762909656 1.0 17.28380032771398 -7.883592684272004 5.006908109631016 1.0038656522967857 1.2771838147164252 0.1926567500211238 0.20108039533057773 0.35886881316884583 13.054147302569072 0.2081428083981074 0.0544288577993653 1.3073964931843051e-08 7.883592684272004 0.27331816241963947 IDIS(ph)PSTFR ddPTM_KYSE-520_SHP099_60min_R1 19 IDISPSTFR 9 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 IDIS(0.986)PS(0.013)T(0.002)FR;IDIS(0.985)PS(0.013)T(0.002)FR;IDIS(0.735)PS(0.265)TFR;IDIS(0.969)PS(0.031)TFR;IDIS(0.86)PS(0.138)T(0.002)FR;IDIS(0.939)PS(0.061)TFR;IDIS(0.999)PS(0.001)TFR;IDIS(0.973)PS(0.02)T(0.007)FR;IDIS(0.997)PS(0.003)TFR;IDIS(0.986)PS(0.013)T(0.001)FR;IDIS(0.992)PS(0.003)T(0.005)FR;IDIS(0.992)PS(0.006)T(0.002)FR;IDIS(0.948)PS(0.042)T(0.011)FR;IDIS(0.991)PS(0.009)TFR;IDIS(0.996)PS(0.004)TFR;IDIS(0.998)PS(0.002)TFR;IDIS(0.992)PS(0.008)TFR;IDIS(0.629)PS(0.366)T(0.005)FR;IDIS(0.864)PS(0.136)T(0.001)FR 199.59 2.2993e-06 417172926000.0 20178398.0 18393894.0 16968495.0 17135349.0 17232160.0 18297368.0 17617901.0 18940632.0 21197840.0 18585482.0 True False 19059062.038300868 17510223.72244221 18062311.338251926 18763887.41702948 18588232.95442162 18183167.339247953 19398890.367224135 18874931.368368752 17348846.610060517 18420829.088766187 1.0346473519980652 0.9505665373726688 0.9805373716467028 1.0186233923896784 1.0090877487027727 0.9870982056033965 1.053095399438585 1.0246515657582154 0.9418059592464592 1.0 24.13483466024086 -5.249955611530059 24.230455012604935 1.0073758222174771 0.9847820303967465 0.04143684943857695 0.033103517462151344 1293.4566284741643 2729148.2580685783 0.008907304408206713 0.015289290989715478 5.623988040387505e-06 5.249955611530059 -0.022593791820730624 IDIS(ph)PSTFRK ddPTM_KYSE-520_SHP099_60min_R1 3 IDISPSTFRK 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 IDIS(0.956)PS(0.043)T(0.001)FRK;IDIS(0.64)PS(0.36)TFRK;IDIS(0.805)PS(0.195)TFRK 132.86 0.00020652 2144791000.0 2170634.0 2494780.0 2627060.0 1411684.0 1710580.0 1579189.0 1151541.0 1079690.0 2868780.0 1340354.0 True False 2050224.6049684 2374927.024058875 2796404.4910446177 1545850.0229217282 1845192.91413117 1569332.695680585 1267950.0022371374 1075944.80739154 2347881.8680586973 1328479.5063396331 1.543286588302288 1.7877031694696779 2.104966224695153 1.1636235376946213 1.3889509814232965 1.1812998907334114 0.9544370057545916 0.8099069667669142 1.767345191893723 1.0 20.34134454172901 -5.278678985554972 24.42636135094892 1.1721368412565767 1.8095570921916417 0.5211241340495233 0.2771852780283089 455.7220195549019 645699.98478932 0.07806657989100554 0.11613090404275501 5.264062226645815e-06 5.278678985554972 0.637420250935065 IDIS(ph)PSTLR ddPTM_KYSE-520_SHP099_60min_R1 11 IDISPSTLR 9 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.953)PS(0.043)T(0.004)LR;IDIS(0.958)PS(0.042)TLR;IDIS(1)PSTLR;IDIS(0.983)PS(0.016)TLR;IDIS(0.973)PS(0.026)TLR;IDIS(0.89)PS(0.11)TLR;IDIS(0.902)PS(0.086)T(0.012)LR;IDIS(0.963)PS(0.037)TLR;IDIS(0.973)PS(0.027)TLR;IDIS(0.969)PS(0.03)T(0.001)LR;IDIS(0.977)PS(0.022)T(0.001)LR 208.82 9.355200000000001e-09 185449820000.0 9236324.0 8297977.0 7408874.0 6482693.0 7013410.0 8362231.0 7285698.0 8158695.0 8580571.0 7977683.0 True False 8723966.695564596 7899329.729402587 7886461.872657525 7098806.193627281 7565325.466155729 8310039.214516915 8022207.455400281 8130394.39129873 7022555.604992463 7907006.935163448 1.103320986955004 0.9990290629787208 0.9974016637806961 0.8977867670835096 0.9567875086224829 1.0509715348245279 1.0145694219293677 1.0282518351086618 0.8881433471067645 1.0 22.914700259349424 -4.214515313297759 2.4385284256696482 0.980602795254445 1.1403665384388075 0.3542874566169195 0.04999680807572154 0.7868588115240109 5.192926153727257 0.01359538617434399 0.2760535288202637 6.1021753989043154e-05 4.214515313297759 0.15976374318436248 IDIS(ph)PSTLRK ddPTM_KYSE-520_SHP099_60min_R1 6 IDISPSTLRK 10 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.841)PS(0.079)T(0.079)LRK;IDIS(0.441)PS(0.237)T(0.322)LRK;IDIS(0.971)PS(0.029)TLRK;IDIS(0.927)PS(0.036)T(0.036)LRK;IDIS(0.759)PS(0.121)T(0.121)LRK;IDIS(0.993)PS(0.007)TLRK 145.0 0.00013145 8191890000.0 10553390.0 11327430.0 11595490.0 7546890.0 8716830.0 8332210.0 6604880.0 6762740.0 12865100.0 7534460.0 True False 9967972.419038601 10783243.259980943 12342953.838839991 8264144.1565447925 9402794.929021725 8280205.586713633 7272565.72781692 6739281.633375383 10529122.142779134 7467710.5461211875 1.3348096926729542 1.4439824887939559 1.6528430986456832 1.1066503054054875 1.2591268596913738 1.108801089112173 0.9738681866284135 0.90245619346827 1.4099531680761352 1.0 22.832234578065506 -5.280741777561207 24.074632742258153 1.105284108782817 1.4738888127373555 0.5447282463907457 0.15435710625865476 369.2367057209424 460524.2070895959 0.043951271956910294 0.06531952082536838 5.239118510532163e-06 5.280741777561207 0.3686047039545386 IDISPS(ph)TFR ddPTM_KYSE-520_SHP099_60min_R1 3 IDISPSTFR 9 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 IDIS(0.333)PS(0.64)T(0.028)FR;IDIS(0.357)PS(0.641)T(0.003)FR;IDIS(0.026)PS(0.914)T(0.06)FR 195.4 3.4777999999999996e-06 241781000000.0 3656090.0 3132920.0 3059400.0 2614500.0 2716740.0 2870000.0 2917160.0 3100260.0 3453360.0 2800750.0 True False 3453279.399465281 2982409.820591208 3256613.8192130756 2862981.2939219084 2930531.9818638787 2852087.2654275564 3212055.0015380117 3089505.921666122 2826316.876121271 2775937.5339505295 1.2440047217311851 1.0743792985668668 1.1731581778709839 1.0313565269055258 1.0556908957865996 1.0274320767472946 1.1571063693810246 1.112959453835167 1.01814858639814 1.0 21.404543673092743 -1.0000035534061529 0.8899363265206661 1.0695086229180526 78.58036145383272 0.46790431597878546 0.055408048671659015 820.1762328997543 1.881601472836263 0.018329921325363745 129041.3770311288 0.09999918180134357 1.0000035534061529 77.51085283091467 IDISPS(ph)TLR ddPTM_KYSE-520_SHP099_60min_R1 5 IDISPSTLR 9 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.251)PS(0.744)T(0.005)LR;IDIS(0.372)PS(0.627)T(0.001)LR;IDIS(0.084)PS(0.909)T(0.007)LR;IDIS(0.398)PS(0.601)TLR;IDIS(0.068)PS(0.925)T(0.007)LR 208.15 9.6238e-09 257476400000.0 9011630.0 8200000.0 7630990.0 6461580.0 6581670.0 7906810.0 7222820.0 8064680.0 8852240.0 8343150.0 True False 8511736.919660963 7806059.691549061 8122895.8254157 7075686.620455135 7099609.9844203 7857460.66590775 7952973.133530154 8036705.507390471 7244896.362810643 8269236.181872479 1.0293256514211175 0.9439879959724966 0.9823030382446227 0.8556638684436417 0.8585569245178665 0.9502039236867599 0.9617542610482422 0.971880029863973 0.8761264285439861 1.0 22.979322645091187 -4.0594260955455 1.4184362075094017 0.9266022507847489 1.1104797457712428 0.25981781398837955 0.049208650936698975 2.838380058423105 3.6157665850190455 0.014568412466616183 0.8468059663739771 8.721152976501133e-05 4.0594260955455 0.18387749498649386 IDISPS(ph)TLRK ddPTM_KYSE-520_SHP099_60min_R1 1 IDISPSTLRK 10 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 IDIS(0.117)PS(0.834)T(0.048)LRK 133.0 0.00020513 1012500000.0 1281000.0 1457600.0 1430400.0 999240.0 1148700.0 1086000.0 761180.0 873860.0 1696500.0 997860.0 True False 1209940.3763898097 1387574.7080977946 1522605.8727209212 1094207.4691675387 1239096.1547910485 1079221.871168753 838127.5028009105 870828.7836204564 1388458.3652847486 989019.7367233328 1.2233733377236706 1.4029797956256085 1.5395100989241968 1.1063555443217925 1.2528528084750161 1.0912035736963792 0.8474325351460275 0.8804968710791875 1.4038732633231104 1.0 19.915639785905284 -5.81384701791258 1.3982602338774304 1.027821533342559 1.375567003319 0.3793853220356592 0.17295870108253306 0.4194154820980367 1.7132616875875688 0.06866996659399428 0.09121678629667601 1.5351576534115974e-06 5.81384701791258 0.34774546997644085 IDISPSTFR ddPTM_KYSE-520_SHP099_60min_R1 4 IDISPSTFR 9 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ;;; 187.78 4.2421000000000006e-05 631140000.0 603460.0 551200.0 477190.0 439420.0 528960.0 537460.0 488010.0 533940.0 580470.0 496870.0 False True 569984.8708323148 524719.524631932 507950.430930996 481182.34468356014 570586.1426292975 534105.512779336 537342.8133186273 532087.8867625322 475071.28045790596 492468.11835901055 1.157404610742323 1.0654893282846183 1.031438202788792 0.9770832400012887 1.1586255462192958 1.0845484060147252 1.0911220306182399 1.0804514382282078 0.9646741844749791 1.0 18.90967080413444 -7.755772744601315 24.89453268291363 0.9823370757599105 1.0782265156656283 0.3714090510138349 0.051136767822351534 132.3991575483902 581673.6070379519 0.03793880098801955 0.013447481488010235 1.754798503636947e-08 7.755772744601315 0.09588943990571785 IDISPSTLR ddPTM_KYSE-520_SHP099_60min_R1 2 IDISPSTLR 9 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 0 ; 194.29 2.8587e-05 539800000.0 301920.0 276780.0 228000.0 193961.0 224370.0 231600.0 218078.0 235730.0 282860.0 265970.0 False True 285171.89573740156 263483.0733447498 242697.24481289828 212394.99512349872 242026.6425093302 230154.498492342 240123.45247617818 234912.30764979575 231499.7543203322 263613.7127215289 1.0817794446021323 0.9995044287513333 0.9206548563324324 0.8057054124034299 0.9181109738589266 0.8730748340677866 0.9108913568917225 0.8911232470594116 0.8781779670349675 1.0 18.00806589319246 -4.600700316299235 2.3433156928094165 0.8911753161279025 1.0786218860787165 0.6227645655365089 0.046045874010717226 0.19505848913543888 1.9358513440441556 0.011780454649670062 0.05549943418610098 2.5078391835584188e-05 4.600700316299235 0.187446569950814 IDKEACR ddPTM_KYSE-520_SHP099_60min_R1 2 IDKEACR 7 1 Q14019 Q14019 COTL1 Coactosin-like protein 0 ; 83.005 0.012292 1069450000.0 1490350.0 1437320.0 887660.0 797810.0 1407940.0 1421540.0 868320.0 1143920.0 1256930.0 1353590.0 False True 1407677.31456093 1368268.9897386965 944879.9839062156 873633.6225296775 1518736.8679172213 1412667.6415665096 956098.2595865463 1139952.0085129342 1028703.1966267957 1341598.2456770844 1.0492539917197763 1.0198798292615177 0.7042942900013625 0.6511887037305775 1.1320355201796926 1.0529736798020017 0.7126561641439967 0.849697002948612 0.766774405036304 1.0 20.355521276819523 -6.768681247047977 24.999993851556077 0.8197566827573488 0.9243762011735244 0.08597248994315776 0.15971986145801698 490.97357718570686 1694893.7864459916 0.07096164857411573 0.04896153535682266 1.7034082760783615e-07 6.768681247047977 0.10461951841617556 IDKLEQDMER ddPTM_KYSE-520_SHP099_60min_R1 1 IDKLEQDMER 10 1 Q8WU90;Q8WU90-2 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 0 99.01100000000001 0.0025188000000000003 177070000.0 345730.0 313870.0 218260.0 203640.0 345820.0 316340.0 216150.0 263720.0 295160.0 279800.0 False True 326551.667704332 298791.2140715254 232329.38882834726 222993.88437340155 373034.0665533566 314365.6047196348 238000.5514207111 262805.2168727108 241566.3843780995 277321.18968110625 1.1775215160436756 1.077419343307692 0.8377628449362438 0.8040996962036111 1.3451336588535168 1.133579460989354 0.8582126439540727 0.9476564599153513 0.8710707777356592 1.0 18.081198329111743 -6.767175294539105 24.99911411171887 0.9148730069449147 1.0541347786157527 0.17536530764732383 0.15150678295311196 296.0650773917689 1290338.7248005613 0.06772633322869093 0.04705568965787935 1.7093252398723607e-07 6.767175294539105 0.13926177167083797 IDKVNEIVETNRPDSK ddPTM_KYSE-520_SHP099_60min_R1 2 IDKVNEIVETNRPDSK 16 2 Q15008-3;Q15008-2;Q15008;Q15008-4 Q15008-3 PSMD6 26S proteasome non-ATPase regulatory subunit 6 0 ; 123.02 7.8972e-05 1116020000.0 997610.0 1018920.0 548660.0 488740.0 910010.0 934000.0 542590.0 776240.0 795650.0 739280.0 False True 942270.5846137687 969969.5537699006 584027.5014870387 535189.702654961 981622.6097513743 928170.5595502921 597440.2923680955 773547.4046157784 651180.0167042797 732730.5543511376 1.2859714652518992 1.3237738593129198 0.7970562958224371 0.7304045115586767 1.3396774625027623 1.266728341050585 0.8153615115684003 1.055705129289696 0.8887032386426492 1.0 19.482923250741685 -4.7381458550677475 24.873877647310547 0.9960280825902076 1.304873056949885 0.3154540954453101 0.1870748346265331 289.9523199653178 309619.08674415806 0.05082593255189026 0.13429023221285902 1.8274863632786096e-05 4.7381458550677475 0.3088449743596774 IDLLAS(ph)DPHEALICK ddPTM_KYSE-520_SHP099_60min_R1 2 IDLLASDPHEALICK 15 0 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2;A0A0U1RRA9;E7EWN5;E9PH68;Q3B891;A0A494C182;H0Y8D8;A0A0A0MSN1;C9IZW4 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 IDLLAS(1)DPHEALICK;IDLLAS(1)DPHEALICK 97.579 0.0009960000000000001 47769000.0 218430.0 198014.0 171382.0 188469.0 220639.0 197492.0 190072.0 202459.0 243210.0 217580.0 True False 206313.25247059012 188501.11021492636 182429.55794089555 206381.03709472908 238002.03403581626 196259.37917206215 209286.3326839577 201756.71698328573 199049.19482517164 215652.41047467844 0.9566934680510566 0.8740969312608721 0.8459425866807834 0.9570077915681912 1.103637253633954 0.9100727357513428 0.9704799135947139 0.9355643952191097 0.9230093667260152 1.0 17.718348316456034 -5.4166523105727205 7.139971460051528 0.9727103591845255 0.8911739780464577 0.2925670909240643 0.056848514764955005 0.33807885133395743 19.979020801320978 0.01653356834953887 0.024562303326214886 3.831313495853057e-06 5.4166523105727205 -0.08153638113806783 IDLLDRK ddPTM_KYSE-520_SHP099_60min_R1 1 IDLLDRK 7 1 A0A0C4DGZ5;P54577 A0A0C4DGZ5 YARS Tyrosine--tRNA ligase;Tyrosine--tRNA ligase, cytoplasmic;Tyrosine--tRNA ligase, cytoplasmic, N-terminally processed 0 86.95299999999999 0.020022 370790000.0 261610.0 243700.0 168850.0 149510.0 269770.0 247640.0 195010.0 216470.0 236020.0 207010.0 False True 247097.97179339456 231992.2861988426 179734.3411695522 163719.3854481793 290999.3642186659 246094.386902606 214723.51391419308 215719.1160944778 193164.71758002148 205176.05245134275 1.2043216975918452 1.1306986533131556 0.8760005810725693 0.7979458786351548 1.41829107608782 1.1994303621811175 1.0465330205391026 1.0513854493113193 0.9414583976647579 1.0 17.646502828062868 -7.486177949631314 2.448303536061718 0.9732764504843594 1.0943550288838098 0.08244802793488437 0.16414314653487733 0.9478946089766085 10.644864107994685 0.1419417147270283 0.04919863256846078 3.264540421243615e-08 7.486177949631314 0.12107857839945035 IDLPEVQIEHDPELEKES(ph)PGLK ddPTM_KYSE-520_SHP099_60min_R1 11 IDLPEVQIEHDPELEKESPGLK 22 1 Q14966;Q14966-3;Q14966-5 Q14966 ZNF638 Zinc finger protein 638 1 IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK;IDLPEVQIEHDPELEKES(1)PGLK 231.07 8.912799999999998e-21 15676200000.0 12349310.0 12168650.0 11356170.0 10914570.0 10761300.0 10936910.0 10497400.0 13482650.0 14634470.0 12690920.0 True False 11664269.15656083 11584049.788483968 12088206.888714444 11951887.45121486 11608153.086578662 10868648.68784922 11558579.636751195 13435881.834024154 11977219.152967114 12578488.322186368 0.92731883655582 0.9209413318810039 0.9610222293081794 0.9501847237186453 0.9228575635836783 0.8640663654851694 0.918916434208058 1.0681634779853066 0.9521986145061077 1.0 23.584455214319902 -7.233420878303144 24.8157534574131 1.0076357887517824 0.9236536319528477 0.5376598905234224 0.03534120394033057 484.91543197412363 429486.3835601215 0.016869298575624886 0.009736931930854528 5.842236338532872e-08 7.233420878303144 -0.08398215679893473 IDPWSFVSAGPRPS(ph)PLPS(ph)PQPAPR ddPTM_KYSE-520_SHP099_60min_R1 4 IDPWSFVSAGPRPSPLPSPQPAPR 24 1 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 2 IDPWS(0.013)FVS(0.016)AGPRPS(0.971)PLPS(1)PQPAPR;IDPWS(0.002)FVS(0.002)AGPRPS(0.996)PLPS(1)PQPAPR;IDPWS(0.027)FVS(0.034)AGPRPS(0.939)PLPS(1)PQPAPR;IDPWSFVS(0.001)AGPRPS(0.999)PLPS(1)PQPAPR 96.74799999999999 0.0018460999999999998 583831000.0 415195.0 401216.0 405517.0 369509.0 378044.0 408601.0 353441.0 368620.0 503137.0 372371.0 True False 392163.3056792869 381940.98112250655 431657.27467014047 404627.0242630682 407793.9120238767 406050.769596155 389170.2655317489 367341.3432565548 411780.0038516196 369072.0826402542 1.0625656182766348 1.0348682522671218 1.1695744408034514 1.0963360364958044 1.104916711951269 1.1001936713591667 1.054455982548767 0.9953105654285254 1.1157170190328216 1.0 18.49354308777295 -6.859218840807883 4.557083556392648 1.0388255957689716 1.095924389106886 0.26193609866445633 0.044411726923087196 0.3049978959674867 10.982001690063026 0.019149280057029275 0.012758117360029485 1.382869376076271e-07 6.859218840807883 0.057098793337914344 IDPWSFVSAGPRPSPLPS(ph)PQPAPR ddPTM_KYSE-520_SHP099_60min_R1 1 IDPWSFVSAGPRPSPLPSPQPAPR 24 1 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 IDPWSFVSAGPRPS(0.002)PLPS(0.998)PQPAPR 105.54 0.00072558 258960000.0 136740.0 149250.0 123720.0 103690.0 138220.0 153930.0 114720.0 131860.0 158180.0 140780.0 True False 129154.75961556804 142079.8059711828 131695.18915899907 113544.66642446481 149097.1276357785 152969.26577256585 126317.01715930601 131402.6084363554 129458.49939330465 139532.79872518266 0.9256229416708345 1.0182538246868869 0.9438296254515744 0.8137489354606664 1.0685453814298767 1.0962961194080758 0.9052854835091079 0.9417327656070305 0.9277997759385599 1.0 17.09024475775549 -3.953135667566085 15.125504599979957 0.9664647047717378 0.7167222257596557 0.025852382405445518 0.07795343832518477 6968286.161428929 64089071.30263063 0.020331995091955966 49253602.61451657 0.00011139464978147167 3.953135667566085 -0.24974247901208213 IDQLEGDHQLIQEALIFDNK ddPTM_KYSE-520_SHP099_60min_R1 2 IDQLEGDHQLIQEALIFDNK 20 0 P12814-3;P12814;P12814-2;P12814-4;H9KV75;H7C5W8;H0YJ11;H0YJW3 P12814-3 ACTN1 Alpha-actinin-1 0 ; 291.69 1.1065999999999999e-43 596400000.0 1086600.0 851100.0 526660.0 765140.0 961020.0 830010.0 691840.0 803040.0 700730.0 669140.0 False True 1026324.1319166013 810211.8784728553 560609.3462857945 837858.6755522706 1036646.8065441761 824829.5997134234 761777.9389077256 800254.441670946 573495.095965801 663211.9401830432 1.547505510279777 1.2216485099005316 0.8452944109104384 1.2633347272382125 1.563070179734802 1.2436893091607706 1.1486191558877523 1.2066345510155918 0.8647237198526903 1.0 19.33911045516643 -7.686797632903815 5.401014435353262 0.9338433497049903 1.2495791298949015 0.31020953666708184 0.19281455668083322 0.25602897716696843 12.812136551385644 0.14989396470630506 0.05249304374440289 2.0568487973290953e-08 7.686797632903815 0.3157357801899112 IDRDS(ph)YSPR ddPTM_KYSE-520_SHP099_60min_R1 1 IDRDSYSPR 9 1 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 IDRDS(0.5)YS(0.5)PR 107.12 0.0021100999999999997 406200000.0 340520.0 296980.0 276700.0 232770.0 300230.0 304830.0 269140.0 263380.0 357240.0 284720.0 True False 321630.6767902089 282712.63502393203 294536.5247356536 254892.39081514766 323856.3929249729 302927.44289905264 296347.29775327427 262466.39625335427 292374.22128754715 282197.6023088083 1.1397356822268427 1.0018250782817075 1.043724405614697 0.9032408097366448 1.1476227660169043 1.0734585992958214 1.0501410902456285 0.93008017823673 1.0360620320494522 1.0 18.106346204569412 -4.255069775570225 23.71876980245786 1.0220853965984376 1.1397357935560075 0.22716525428147594 0.0658306884850764 569.1829633676602 2119366.413133602 0.01656973364451806 0.14834535967962492 5.558149505387732e-05 4.255069775570225 0.11765039695756996 IDRDSYS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 IDRDSYSPR 9 1 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 IDRDS(0.228)YS(0.772)PR;IDRDS(0.007)YS(0.993)PR;IDRDS(0.009)YS(0.991)PR;IDRDS(0.063)YS(0.937)PR;IDRDS(0.068)YS(0.932)PR 163.71 0.00019274 8562480000.0 10015700.0 9986400.0 9386100.0 8706500.0 9116000.0 8587200.0 8031100.0 8918200.0 10628700.0 8621800.0 True False 9460109.155197041 9506638.354108004 9991143.024290996 9533963.142295314 9833377.337055119 8533604.099539887 8842961.963982768 8887264.845723521 8698796.007722953 8545417.559658904 1.1070388414787595 1.1124837713006348 1.1691813717163517 1.115681366736615 1.150719349687065 0.9986175678325205 1.034819176739649 1.0400035789565634 1.0179486194785983 1.0 23.026719558186496 -6.2602535985965 24.999652297211664 1.021811846970612 1.1312589253614238 0.875079667927179 0.02127765844013498 36.48658940539763 769246.8575237644 0.00723243829384414 0.006862942302977687 5.492200728370451e-07 6.2602535985965 0.10944707839081191 IDRVETR ddPTM_KYSE-520_SHP099_60min_R1 5 IDRVETR 7 1 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ;;;; 135.83 0.001983 221820000.0 993640.0 957880.0 696190.0 584912.0 974760.0 928700.0 657958.0 766595.0 837930.0 782740.0 False True 938520.808427769 911862.0069928067 741067.5213433848 640501.860619795 1051468.0663742702 922903.6388162265 724470.8156912705 763935.8608696171 685783.0344963446 775805.5325625051 1.2097371944845654 1.175374457540801 0.9552233004779177 0.8255958919295167 1.3553242690874412 1.1896069312213495 0.9338304320907912 0.9847001971567769 0.8839625469428996 1.0 19.565335538746492 -6.775787484405502 24.88900576925277 0.9493482549235475 1.1110956384184776 0.25770536362213625 0.13921614134063381 373.63451607245105 648120.6582562657 0.06281691791467084 0.04257372449485543 1.6757626851649233e-07 6.775787484405502 0.16174738349493012 IDS(ph)LSAQLSQLQK ddPTM_KYSE-520_SHP099_60min_R1 4 IDSLSAQLSQLQK 13 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 IDS(0.987)LS(0.013)AQLSQLQK;IDS(0.999)LS(0.001)AQLSQLQK;IDS(0.792)LS(0.208)AQLSQLQK;IDS(0.982)LS(0.018)AQLSQLQK 353.45 3.0298e-52 2407710000.0 2327200.0 2716960.0 1845880.0 1766170.0 1839620.0 2532710.0 1931990.0 2399180.0 2526610.0 2632590.0 True False 2198105.5768418172 2586433.1633598986 1964868.378312424 1934026.265781625 1984387.627994001 2516902.417428928 2127294.4036053675 2390857.80455282 2067841.314654933 2609267.3007240286 0.8424225361011803 0.9912488316709469 0.7530345310989048 0.7412143114831373 0.7605152708744581 0.9646012184073779 0.8152841999035815 0.9162947023056612 0.7924988421389948 1.0 21.315213314811704 -6.251833432262745 24.967292930732906 0.8873509888674994 0.8194891222748224 0.16592630735454184 0.08816694790806014 1568.443786761355 4076622.8367029703 0.030306917086183948 0.029941571907501744 5.599723300796587e-07 6.251833432262745 -0.06786186659267701 IDS(ph)PGFKPASQQK ddPTM_KYSE-520_SHP099_60min_R1 2 IDSPGFKPASQQK 13 1 G3V1L9;Q07157 G3V1L9 TJP1 Tight junction protein ZO-1 1 IDS(1)PGFKPASQQK;IDS(1)PGFKPASQQK 202.32 1.1847e-08 934000000.0 710060.0 662830.0 552760.0 514680.0 595060.0 597790.0 570370.0 614600.0 804080.0 611300.0 True False 670671.5563304825 630986.6518718858 588391.7940472708 563595.0324558151 641887.8365717438 594058.9708710585 628028.5658747677 612468.0960487184 658079.3412072861 605884.3575842036 1.1069299742356775 1.0414308340749556 0.9711288741523555 0.930202315674553 1.0594230211373903 0.9804824360208019 1.0365485723692522 1.0108663285032902 1.0861467753206167 1.0 19.208682933711835 IDS(ph)PGFKPASQQVYR ddPTM_KYSE-520_SHP099_60min_R1 12 IDSPGFKPASQQVYR 15 1 A0A087X0K9;G5E9E7;Q07157-2 A0A087X0K9 TJP1 Tight junction protein ZO-1 1 IDS(0.998)PGFKPAS(0.001)QQVYR;IDS(1)PGFKPASQQVYR;IDS(1)PGFKPASQQVYR;IDS(1)PGFKPASQQVYR;IDS(1)PGFKPASQQVYR;IDS(1)PGFKPASQQVYR;IDS(1)PGFKPASQQVYR;IDS(1)PGFKPASQQVYR;IDS(1)PGFKPASQQVYR;IDS(1)PGFKPASQQVYR;IDS(1)PGFKPASQQVYR;IDS(1)PGFKPASQQVYR 214.66 2.5806e-14 49636240000.0 20641240.0 18316140.0 16305070.0 15472480.0 16655000.0 16988060.0 16558420.0 18280530.0 21688420.0 17129500.0 True False 19496229.269908182 17436205.141313378 17356120.901234426 16942979.84722926 17965653.746012826 16882031.216139104 18232306.68820604 18217119.108137794 17750349.6485759 16977745.956549343 1.1483402637667168 1.0270035366259664 1.0222865241153594 0.9979522541208322 1.0581883950903617 0.9943623411108166 1.0738944224320153 1.0729998643377243 1.0455068472578077 1.0 24.017141597003132 -4.259205609714822 24.758857159219154 1.0342583220426684 1.1483403089627748 0.599591625651146 0.028373427900480374 128.67454421830226 1426105.4769070635 0.007233575388721008 0.0465907698354135 5.50546987108369e-05 4.259205609714822 0.1140819869201064 IDS(ph)TEVIYQPR ddPTM_KYSE-520_SHP099_60min_R1 7 IDSTEVIYQPR 11 0 K7EMR0;K7EQN8;K7EP59;Q15831-2;Q15831 K7EMR0 STK11 Serine/threonine-protein kinase STK11 1 IDS(0.976)T(0.024)EVIYQPR;IDS(0.984)T(0.016)EVIYQPR;IDS(0.984)T(0.016)EVIYQPR;IDS(0.898)T(0.102)EVIYQPR;IDS(0.973)T(0.027)EVIYQPR;IDS(0.98)T(0.02)EVIYQPR;IDS(0.828)T(0.172)EVIYQPR 225.15 4.5344999999999997e-10 3425016000.0 3112888.0 3276090.0 2776158.0 2522360.0 2611909.0 2722627.0 2520947.0 3141060.0 3737426.0 2791543.0 True False 2940209.897251616 3118701.7188886534 2955113.586689852 2762084.3360248115 2817451.378570672 2705634.0749857957 2775788.9248317713 3130164.395988918 3058803.6512423856 2766812.1008075927 1.0626706079510824 1.1271823330461614 1.0680572004970257 0.998291259178243 1.0183023913146463 0.9778886228653041 1.003244464639127 1.1313252515684993 1.1055335670787203 1.0 21.399793240580436 -5.003537159302714 23.691683272435085 1.0346486835997168 1.095599817210349 0.21044027611781024 0.0484255489927246 125.17692081928791 838479.3398665573 0.014085942155530854 0.028337593897921266 9.918884671943807e-06 5.003537159302714 0.06095113361063209 IDSLS(ph)LNGEFGYQK ddPTM_KYSE-520_SHP099_60min_R1 2 IDSLSLNGEFGYQK 14 0 Q8TEQ0;Q8TEQ0-2 Q8TEQ0 SNX29 Sorting nexin-29 1 IDSLS(1)LNGEFGYQK;IDSLS(1)LNGEFGYQK 203.04 7.8553e-10 0.0 189805.0 162817.0 172408.0 152882.0 147943.0 157182.0 138499.0 202031.0 220850.0 156424.0 True False 179276.1382831131 154995.02692670058 183521.6955425535 167411.85931435082 159585.27241947592 156200.96883429738 152499.8305399817 201330.20161538981 180749.20717544138 155038.2050560303 1.1563352285865494 0.9997215000695208 1.1837191708729429 1.0798103554788236 1.0293286894143436 1.0074998531997121 0.9836274258004261 1.2985844459604634 1.1658365569320104 1.0 17.24226424769825 -7.246346464223849 24.996591088114457 1.1741578956946366 1.0623156284647712 0.16528580894222877 0.09163489273747347 1120.152197558084 1855177.7118318693 0.04235556987592999 0.02434197412759382 5.670920196710001e-08 7.246346464223849 -0.11184226722986534 IDSNIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 IDSNISPK 8 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 IDSNIS(1)PK;IDSNIS(1)PK 163.83 0.00019131 40475000000.0 21104600.0 18318900.0 17568300.0 15776600.0 17262300.0 16364000.0 17098500.0 18293900.0 19236500.0 16729700.0 True False 19933885.767022956 17438832.5467705 18700780.72827388 17276003.320592232 18620744.8009485 16261866.206082394 18826983.245278884 18230442.73072837 15743636.512702638 16581487.873509644 1.2021771459284458 1.0517049302089794 1.127810777351892 1.0418849895968707 1.122983953128642 0.9807241865226176 1.1354218263703955 1.099445530449235 0.9494706767451463 1.0 23.98307013132415 -1.0000000000000002 0.1574291005839816 0.9927720072179047 1.5728773777500944 0.3402796191057482 0.061470638446609896 86.00859258923035 0.8789055077425257 0.1875898706749326 11.527020529932507 0.09999999999999995 1.0000000000000002 0.5801053705321897 IDSQTNS(ph)S(ph)HLK ddPTM_KYSE-520_SHP099_60min_R1 1 IDSQTNSSHLK 11 0 Q5TG12;E9PGC5;Q15262;Q15262-2;Q15262-3;Q15262-4 Q5TG12 PTPRK Protein-tyrosine-phosphatase;Receptor-type tyrosine-protein phosphatase kappa 2 IDS(0.016)QT(0.009)NS(0.988)S(0.987)HLK 59.198 0.045006 219000000.0 136270.0 119660.0 120440.0 130780.0 137920.0 132020.0 120110.0 141430.0 164900.0 109370.0 True False 128710.83145248974 113911.35398667824 128203.75511081354 143209.29187955934 148773.51934254507 131196.01420966737 132251.89096063664 140939.41234001008 134958.3167907192 108401.06688857247 1.1873576076958179 1.0508324065091526 1.182679827704986 1.3211059262614722 1.37243593271524 1.2102834222519807 1.220023886818207 1.3001662842016526 1.244990669044295 1.0 16.72601943027323 -5.002254638390249 21.318403593486252 1.2543736304709399 1.1185100987535266 0.17785286160409675 0.09885694634355544 17.657502255956675 167017.81862988262 0.02473286483851202 0.049804622459024284 9.948219557821046e-06 5.002254638390249 -0.13586353171741328 IDSRPPS(ph)PEPPKQEYWGSK ddPTM_KYSE-520_SHP099_60min_R1 3 IDSRPPSPEPPKQEYWGSK 19 2 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 IDS(0.142)RPPS(0.858)PEPPKQEYWGSK;IDS(0.003)RPPS(0.997)PEPPKQEYWGSK;IDS(0.027)RPPS(0.973)PEPPKQEYWGSK 154.33 4.4525e-07 3547700000.0 5512600.0 4978400.0 4872000.0 4844700.0 4844100.0 4440790.0 5014600.0 5853100.0 6145300.0 5192900.0 True False 5206805.088904348 4739230.1912692515 5186056.915475612 5305138.831387826 5225303.110841229 4413073.382382593 5521524.7057797685 5832796.962223814 5029468.430406346 5146894.946015069 1.011640055512628 0.920794040091794 1.0076088534682184 1.0307455052089758 1.015234071347593 0.8574244138787737 1.0727875279550347 1.1332652061880137 0.9771849791300599 1.0 22.295270905121033 IDTIEIITDR ddPTM_KYSE-520_SHP099_60min_R1 7 IDTIEIITDR 10 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;;;; 244.55 7.1656e-13 4175715000.0 1346820.0 1674329.0 1684300.0 887202.0 1607518.0 1719297.0 1302001.0 1408379.0 1610203.0 1692071.0 False True 1272109.2097808942 1593891.7216209327 1792872.6729752845 971521.4113329931 1734020.521073732 1708566.2296821594 1433619.9673852287 1403493.661967129 1317830.7251144086 1677080.5673513182 0.758525997227425 0.9503966312949598 1.0690438538721139 0.5792932255290254 1.0339518296442618 1.0187740904902187 0.8548307071790852 0.8368671662469525 0.7857885606507936 1.0 20.677520567305862 -11.028019502121802 11.113608289118616 1.2406430207845658 0.8825168732532613 0.06273033332690692 0.14157106173025058 0.0661564889303601 0.00016679309690473216 0.010743077736364959 0.03283565993955732 9.37519906372707e-12 11.028019502121802 -0.35812614753130445 IDYGEYMDKNNVR ddPTM_KYSE-520_SHP099_60min_R1 1 IDYGEYMDKNNVR 13 1 A0A0G2JLD8;E7EUY5;Q04837 A0A0G2JLD8 SSBP1 Single-stranded DNA-binding protein, mitochondrial 0 143.25 1.1312000000000001e-05 273130000.0 147670.0 178870.0 124140.0 116770.0 178160.0 157900.0 129950.0 105770.0 146650.0 113650.0 False True 139478.45072715307 170276.81671065613 132142.26303102283 127867.78569181918 192180.17840826427 156914.48752996887 143086.61418978235 105403.10855690358 120022.05674565757 112643.14941836214 1.2382328747674065 1.511648223526135 1.173105188494331 1.135158119708745 1.7060973472474366 1.393022907653095 1.270264680352213 0.9357258661636964 1.065506933758482 1.0 16.781400050764837 -7.128057232443796 4.022598918598829 1.0017603216341116 1.3617637945608279 0.5032241665527846 0.1593881361356186 0.20516490183661346 5.631778594106464 0.08313547585588457 0.046027391207145274 7.44633837677541e-08 7.128057232443796 0.3600034729267163 IDYLLPGPGPAHS(ph)PQPSK ddPTM_KYSE-520_SHP099_60min_R1 2 IDYLLPGPGPAHSPQPSK 18 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 IDYLLPGPGPAHS(0.979)PQPS(0.021)K;IDYLLPGPGPAHS(0.991)PQPS(0.009)K 114.15 5.9053e-05 595980000.0 793850.0 683530.0 602400.0 556920.0 606810.0 826790.0 661280.0 720230.0 849480.0 726700.0 True False 749813.5579992586 650692.1928005522 641231.6678740781 609849.5093558959 654562.4947233885 821629.6969278223 728128.6358708667 717731.6902329457 695235.8456481498 720262.0033640455 1.0410288957312617 0.9034104114356144 0.8902755731652519 0.8467050969057668 0.9087838754039477 1.1407372499039659 1.0109219040711288 0.9964869545814138 0.9652540914292176 1.0 19.458162272931272 IDYLLPGPGPAHS(ph)PQPSKR ddPTM_KYSE-520_SHP099_60min_R1 4 IDYLLPGPGPAHSPQPSKR 19 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 IDYLLPGPGPAHS(0.902)PQPS(0.098)KR;IDYLLPGPGPAHS(0.959)PQPS(0.041)KR;IDYLLPGPGPAHS(1)PQPSKR;IDYLLPGPGPAHS(1)PQPSKR 149.32 9.237100000000001e-07 3263010000.0 3543750.0 3370300.0 3180940.0 3133880.0 3092830.0 3505500.0 3050410.0 3354810.0 4302650.0 3087340.0 True False 3347171.1232095184 3208385.7290765624 3385988.4820839497 3431723.0129646184 3336218.125204491 3483620.874200798 3358775.2119326913 3343172.947128542 3521397.2209799127 3059988.5695141763 1.0938508583190352 1.0484959849330242 1.1065363171018416 1.1214822980562509 1.0902714338355095 1.1384424467813878 1.0976430583418657 1.0925442599477833 1.1507877042622392 1.0 21.545094833112685 -4.787123311437143 24.650350940581113 1.104768085345853 1.0711734185477215 0.06445527700226306 0.03993680687207631 357.4152670577566 343031.46713809 0.009573628477563264 0.019940189965615855 1.6325883329852098e-05 4.787123311437143 -0.0335946667981315 IECDDKGDGSCDVR ddPTM_KYSE-520_SHP099_60min_R1 3 IECDDKGDGSCDVR 14 1 Q60FE5;P21333-2;P21333;A0A087WWY3;Q14315;Q14315-2 Q60FE5;Q14315 FLNA;FLNC Filamin-A;Filamin-C 0 ;; 88.507 0.0030334 2551890000.0 4095490.0 4062610.0 2990830.0 2456320.0 4133150.0 4122910.0 3080590.0 3675780.0 3856340.0 3872270.0 False True 3868305.005543089 3867436.117498068 3183623.6872971985 2689767.914280463 4458405.39059339 4097177.38937419 3392006.100861105 3663029.5771135013 3156125.866420385 3837964.70038047 1.0079053111560956 1.0076789182335826 0.8295083295012055 0.7008318534075672 1.1616587797567324 1.0675391019015947 0.8838033608086193 0.9544198196378338 0.8223436411771864 1.0 21.871910011753705 -4.614928537992018 17.520091311589418 0.9288479007507277 1.0084047418112956 0.06251874997275852 0.12425222456425825 5.918137645346404 1110.1420799863483 0.03348199939719223 0.0885867033562225 2.4270094202065117e-05 4.614928537992018 0.07955684106056793 IEDEKKDEEKEDPK ddPTM_KYSE-520_SHP099_60min_R1 8 IEDEKKDEEKEDPK 14 3 P55209;P55209-2;H0YIV4;F5H4R6;F8VY35;F8W118;F8VV59;H0YH88;F8W0J6;F8W543;F8W020;H0YHC3;B7Z9C2;F8VXI6;F8VUX1;P55209-3 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 0 ;;;;;;; 164.65 1.2864000000000002e-07 21444270000.0 39981810.0 39010840.0 26254410.0 22887430.0 36417080.0 39272650.0 27408690.0 37797070.0 34320920.0 29080740.0 False True 37763939.29753778 37136700.689935364 27946811.27714126 25062644.465843227 39282897.01115876 39027534.82390016 30179427.868236523 37665960.78607241 28089106.087986235 28823107.2680734 1.3101966747134133 1.288435016549056 0.9695974489224211 0.8695330532112497 1.3628959794585156 1.354036345246161 1.0470567100052215 1.3067973704484668 0.97453427996987 1.0 24.78072253749643 -7.784893872736309 24.931941933417384 0.9872667782492605 1.1805733483896732 0.1940797098363608 0.16343429206275695 479.15227330793533 509320.2589401874 0.1661536293963844 0.043007911835840386 1.640990728279539e-08 7.784893872736309 0.19330657014041275 IEDFLER ddPTM_KYSE-520_SHP099_60min_R1 9 IEDFLER 7 0 P46781;B5MCT8;C9JM19 P46781 RPS9 40S ribosomal protein S9 0 ;;;;;;;; 192.56 0.0005912000000000001 3299980000.0 4536970.0 4718640.0 3767770.0 2643030.0 4459810.0 4517690.0 3522040.0 3563460.0 3793300.0 3922870.0 False True 4285295.22987453 4491949.451576959 4010646.482845147 2894222.7765440536 4810771.674152231 4489493.420957983 3878082.1749979234 3551099.188977817 3104532.3413113095 3888116.423746682 1.1021519838506062 1.155302198293849 1.0315139892288494 0.7443765723854306 1.2373013433369509 1.154670522090951 0.997419251983435 0.9133212079991918 0.7984669189303 1.0 21.89063998822858 -7.148439931387391 3.322434143606016 0.8902085692382996 1.0659486185730445 0.240444866241877 0.13143878370377432 0.3830704865443004 7.866466540290402 0.07344733619624091 0.03881969468852065 7.104934337508501e-08 7.148439931387391 0.17574004933474485 IEDPVY(ph)GIYYVDHINR ddPTM_KYSE-520_SHP099_60min_R1 2 IEDPVYGIYYVDHINR 16 0 H7C4S7;A0A087WXD2;H7C5T8;H7C4U7;H7C535;A0A087WT53;Q96QZ7-4;Q96QZ7-3;Q96QZ7-5;Q96QZ7-7;Q96QZ7-6;Q96QZ7-2;Q96QZ7 H7C4S7 MAGI1 Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 1 IEDPVY(1)GIYYVDHINR;IEDPVY(1)GIYYVDHINR 164.65 7.1038e-07 112685000.0 96552.0 98079.0 89934.0 84964.0 102182.0 90778.0 95317.0 102445.0 107484.0 77820.0 True False 91196.06808835981 93367.1376204197 95731.28953948771 93038.9530146419 110223.14206394964 90211.42082961055 104952.57256427455 102089.64220584273 87967.61505114404 77130.5753430439 1.1823594946979015 1.2105074700293947 1.2411587637420798 1.2062525477198156 1.4290460245333851 1.1695935162986744 1.3607129481076767 1.3235949784089063 1.140502513560953 1.0 16.235015252032483 -8.008161472293013 4.445488154144508 1.0003862522845675 1.2655470980680974 0.5297828481213727 0.07915000525042927 0.129153440285484 7.9733974689018705 0.07591589645179686 0.01986767917364161 9.813829933564053e-09 8.008161472293013 0.26516084578352994 IEDS(ph)EPHIPLIDDTDAEDDAPTK ddPTM_KYSE-520_SHP099_60min_R1 3 IEDSEPHIPLIDDTDAEDDAPTK 23 0 H0YHH6;A0A0U1RQU3;E7ERY9;P20020-6;P20020;P20020-4;P20020-1 H0YHH6 ATP2B1 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 1 1 IEDS(1)EPHIPLIDDTDAEDDAPTK;IEDS(1)EPHIPLIDDTDAEDDAPTK;IEDS(1)EPHIPLIDDTDAEDDAPTK 176.7 5.2426e-11 534337000.0 359685.0 399842.0 352614.0 490829.0 412193.0 433179.0 427293.0 521954.0 645055.0 425448.0 True False 339732.5560357287 380632.99014492205 375344.06264234806 537477.2405868799 444630.2440426461 430475.3691814089 470487.946417811 520143.46339897887 527929.2725132641 421678.8617135349 0.8056665554806114 0.9026608272422791 0.890118278912771 1.2746127192688448 1.0544285815889511 1.020860679219557 1.115749422453702 1.2335061361276756 1.2519699715749797 1.0 18.685785177188762 -5.1644450201842185 6.895515827414219 1.136235563003694 0.8657941854131457 0.6396320115414469 0.09286977974768812 0.16940704394305917 10.364945157007098 0.02628553397078893 0.045913517027670034 6.847861685912742e-06 5.1644450201842185 -0.2704413775905483 IEDS(ph)EPHIPLIDDTDAEDDAPTKR ddPTM_KYSE-520_SHP099_60min_R1 5 IEDSEPHIPLIDDTDAEDDAPTKR 24 1 H0YHH6;A0A0U1RQU3;E7ERY9;P20020-6;P20020;P20020-4;P20020-1 H0YHH6 ATP2B1 Calcium-transporting ATPase;Plasma membrane calcium-transporting ATPase 1 1 IEDS(0.939)EPHIPLIDDT(0.061)DAEDDAPTKR;IEDS(0.968)EPHIPLIDDT(0.032)DAEDDAPTKR;IEDS(1)EPHIPLIDDTDAEDDAPTKR;IEDS(1)EPHIPLIDDTDAEDDAPTKR;IEDS(1)EPHIPLIDDTDAEDDAPTKR 156.69 8.288e-08 2298170000.0 959750.0 1080560.0 934370.0 1618570.0 1407470.0 1316190.0 1190360.0 1675310.0 2192490.0 1215160.0 True False 906510.7542858089 1028648.2756463743 994600.9852448587 1772398.4061591856 1518229.881591152 1307975.169994108 1310693.2055940689 1669498.7406302942 1794389.0841751604 1204394.6277801753 0.7526692110513666 0.8540790966016514 0.8258098818308512 1.4716093589905 1.2605751026882341 1.0860021622687261 1.0882589272336867 1.3861725236248805 1.4898680571852154 1.0 20.199876747351457 -5.240659123005279 23.505829313671573 1.257019442043328 0.8151751577799232 0.6267210929975053 0.1569331439528042 256.504955189698 290147.165248874 0.044207959297948546 0.07643100816565761 5.74567262127716e-06 5.240659123005279 -0.44184428426340483 IEDTVFHVFDK ddPTM_KYSE-520_SHP099_60min_R1 1 IEDTVFHVFDK 11 0 Q9Y2L1;Q9Y2L1-2;G3V1J5 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 0 84.289 0.0030775999999999998 0.0 330230.0 270750.0 208710.0 178590.0 286640.0 271060.0 209640.0 208480.0 210020.0 261660.0 False True 311911.48360281606 257742.7635959645 222163.78054780705 195563.13990495857 309196.93724149605 269368.21399539796 230832.4570892338 207756.83153959768 171885.66217335852 259341.89596839945 1.2027037993152567 0.9938338833898639 0.8566443910585025 0.7540746132618223 1.192236742493667 1.0386606182142673 0.8900700607099769 0.801092437316463 0.6627762997240624 1.0 17.984495762862387 -6.999722570459893 3.647349910872571 0.8025976790436176 0.9953709518869983 0.2386757133970281 0.14833678864375036 0.3476786272225078 10.01978408668274 0.07420602981644256 0.04434244251715464 1.000639009202853e-07 6.999722570459893 0.19277327284338075 IEDVGS(ph)DEEDDS(ph)GKDK ddPTM_KYSE-520_SHP099_60min_R1 4 IEDVGSDEEDDSGKDK 16 1 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 2 IEDVGS(1)DEEDDS(1)GKDK;IEDVGS(1)DEEDDS(1)GKDK;IEDVGS(1)DEEDDS(1)GKDK;IEDVGS(1)DEEDDS(1)GKDK 309.81 9.019999999999998e-48 5177900000.0 8901100.0 8237200.0 7423450.0 7621300.0 7936400.0 7924000.0 7728100.0 8236900.0 9440100.0 7822400.0 True False 8407338.239097066 7841472.547710726 7901977.464939962 8345626.060572592 8560949.528061016 7874543.376741451 8509331.76698774 8208328.116406922 7726015.805555287 7753099.621735118 1.0843841365752414 1.0113983993869835 1.0192023642760217 1.0764244583129539 1.1041970238665788 1.0156638971419736 1.0975393303515142 1.0587156771977508 0.9965067111863358 1.0 22.886341771955127 -7.761089135247076 24.990215370905503 0.9982533260844481 1.057566715423908 0.3617901747035911 0.031958706479716964 10.30970600863238 736079.3548337606 0.025559169348643083 0.008263349019419908 1.7334481857511717e-08 7.761089135247076 0.05931338933945984 IEDVGS(ph)DEEDDS(ph)GKDKK ddPTM_KYSE-520_SHP099_60min_R1 13 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 2 IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK;IEDVGS(1)DEEDDS(1)GKDKK 200.95 6.0737e-13 75479200000.0 49450870.0 43585060.0 41729490.0 40401920.0 43990080.0 42939860.0 41956880.0 44401380.0 50269260.0 41121120.0 True False 46707731.663234584 41491168.295091145 44419439.69494473 44241706.3295198 47451849.02668294 42671856.406007715 46198290.8900884 44247361.976139955 41141629.56892066 40756818.86854723 1.146010237302396 1.0180178298240696 1.0898652281526322 1.0855044028880751 1.1642677309956198 1.046986923676184 1.13351071483502 1.08564316854195 1.0094416274639724 1.0 25.280538115576118 -7.759224447096242 4.440138663342292 1.0008989623939788 1.0954837038531184 0.4398486811716493 0.04150147129288363 0.17619858248914247 8.069879005821017 0.0345677639511188 0.010230773360326897 1.740906925298404e-08 7.759224447096242 0.09458474145913964 IEDVGS(ph)DEEDDS(ph)GKDKKK ddPTM_KYSE-520_SHP099_60min_R1 4 IEDVGSDEEDDSGKDKKK 18 3 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 2 IEDVGS(1)DEEDDS(1)GKDKKK;IEDVGS(1)DEEDDS(1)GKDKKK;IEDVGS(1)DEEDDS(1)GKDKKK;IEDVGS(1)DEEDDS(1)GKDKKK 116.94 0.00015628 2267640000.0 1825620.0 1806550.0 1772180.0 1435330.0 1627560.0 1554770.0 1345630.0 1391560.0 2178290.0 1397980.0 True False 1724349.2193167554 1719760.6263131676 1886417.5583882534 1571743.3316522983 1755639.712450351 1545066.1037173516 1481659.412483237 1386733.0031525446 1782767.4462222878 1385594.9848119824 1.2444828670845256 1.2411712261982022 1.361449470491718 1.1343454248036091 1.2670655795485444 1.1150921594357592 1.069330813639088 1.0008213210592103 1.2866439802134528 1.0 20.402074182648118 -6.33132430547412 4.271088051436053 1.089725161731878 1.2493829130065863 0.42611324528267214 0.0903344198906286 0.22421097269689164 7.984623605557889 0.031677055824385014 0.028053940846796417 4.6631103672257246e-07 6.33132430547412 0.15965775127470838 IEDVGS(ph)DEEDDSGK ddPTM_KYSE-520_SHP099_60min_R1 14 IEDVGSDEEDDSGK 14 0 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(0.995)DEEDDS(0.005)GK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK;IEDVGS(1)DEEDDSGK 405.65 2.7112999999999993e-96 208496180000.0 28995520.0 24194330.0 22356500.0 24470680.0 25554440.0 24700920.0 26256310.0 28375790.0 28401700.0 25092080.0 True False 27387080.704463914 23031998.0703703 23797635.761664737 26796366.069821786 27565429.043125756 24546752.395938944 28910554.051691543 28277361.007449202 23244667.228592854 24869783.692542832 1.1012190955515182 0.9261036748492675 0.9568895353440658 1.077466792678886 1.108390381834773 0.9870110934378272 1.16247710109197 1.1370167652856638 0.9346549819636241 1.0 24.567890623834998 -5.271047439095169 24.285625290691655 1.0673311155939829 0.9878740591434506 0.11076265292759901 0.07868157728160051 772.1854687438638 1951797.9785321786 0.021776196494606888 0.03280523280781575 5.357381342727382e-06 5.271047439095169 -0.07945705645053225 IEDVGS(ph)DEEDDSGKDK ddPTM_KYSE-520_SHP099_60min_R1 18 IEDVGSDEEDDSGKDK 16 1 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(0.999)DEEDDS(0.001)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.963)DEEDDS(0.037)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(0.998)DEEDDS(0.002)GKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK;IEDVGS(1)DEEDDSGKDK 308.04 8.6855e-47 885374790000.0 126803420.0 112627610.0 105476560.0 109908780.0 112048180.0 103963800.0 105282010.0 115034920.0 132459290.0 104207260.0 True False 119769381.51624921 107216810.55811091 112275747.82606296 120354477.40592021 120865734.29906432 103314923.36078638 115924943.02420002 114635890.7118721 108408021.96296972 103284064.74842143 1.1596114251310945 1.038076985247132 1.0870577963749142 1.165276344410716 1.1702263518914384 1.000298774185932 1.1223894344841012 1.109908784003625 1.0496103365705947 1.0 26.622042443293857 -7.973269100299652 3.1078155867747133 1.000414733435414 1.1047389084073185 0.30467717411860673 0.05199147990828434 0.28766233035176136 6.41174592740063 0.05049155025568128 0.013503903027461822 1.0634838514219397e-08 7.973269100299652 0.10432417497190438 IEDVGS(ph)DEEDDSGKDKK ddPTM_KYSE-520_SHP099_60min_R1 17 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(1)DEEDDSGKDKK;IEDVGS(0.906)DEEDDS(0.094)GKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(0.992)DEEDDS(0.008)GKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(0.982)DEEDDS(0.018)GKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(0.999)DEEDDS(0.001)GKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK;IEDVGS(1)DEEDDSGKDKK 271.05 5.7821e-30 1323574160000.0 81251472.0 66743520.0 71416144.0 67325855.0 72973280.0 61086571.0 68574041.0 69548150.0 87056816.0 64017860.0 True False 76744290.8773662 63537061.115134075 76019742.91211061 73724484.01694359 78715861.97483289 60705307.051476024 75506174.28242628 69306903.70031019 71249492.73814036 63450711.5655415 1.2095103267375193 1.0013608917451364 1.198091259127739 1.161917371734906 1.2405828088077977 0.9567316985684297 1.1899972816606175 1.0922951372849385 1.122910854428214 1.0 25.919133007416164 -6.236066733747572 24.9995169367112 1.0855060316023193 1.1553198440840666 0.2096002050043535 0.0848766295208515 1595.864303666062 1572396.9471558607 0.027402685851595762 0.02739352067244612 5.806751840400361e-07 6.236066733747572 0.06981381248174734 IEDVGS(ph)DEEDDSGKDKKK ddPTM_KYSE-520_SHP099_60min_R1 3 IEDVGSDEEDDSGKDKKK 18 3 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 1 IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK;IEDVGS(1)DEEDDSGKDKKK 226.71 1.3271000000000002e-18 9108200000.0 7846380.0 9640660.0 10080540.0 5642160.0 5751480.0 5618200.0 4425410.0 4288850.0 11843800.0 4499650.0 True False 7411125.660029261 9177508.222674312 10730347.737834262 6178389.190022736 6204088.754555251 5583134.7298345305 4872773.630639511 4273972.980375112 9693264.477901267 4459786.601674731 1.6617668785421815 2.0578357312495603 2.406022685884751 1.3853553413749973 1.3911178512948363 1.2518838295397277 1.0926024193197261 0.9583357595563333 2.173481680549753 1.0 22.088543248960526 -5.368799712818924 6.449402956132007 1.3043922684911693 2.040642647217238 0.45575035714412027 0.36091787124745484 0.20933901620271306 10.832650856308735 0.10067322737141052 0.15005362698633956 4.2776011434211185e-06 5.368799712818924 0.7362503787260688 IEDVGSDEEDDSGKDKK ddPTM_KYSE-520_SHP099_60min_R1 1 IEDVGSDEEDDSGKDKK 17 2 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 164.01 2.668e-08 847280000.0 386730.0 403400.0 359860.0 296790.0 353450.0 366450.0 330230.0 370160.0 416690.0 347230.0 False True 365277.31597285764 384020.0584842552 383057.1513963581 324996.8323668331 381264.5041445952 364162.8496222741 363612.8711342195 368876.0013559939 341029.5999000894 344153.81234085234 1.0613780898962828 1.1158384556958476 1.11304055820534 0.9443359937124682 1.1078317033634606 1.058139810061452 1.056541749925742 1.0718347091580567 0.9909220461063244 1.0 18.39269396583583 -1.0000000001127112 0.03895885732818671 0.8232714586341179 1.4297737725912167 0.19691001884422676 0.048660539409094664 1383.985076872311 4.1182172452952175 17.854561297905082 56.19863012376818 0.0999999999740473 1.0000000001127112 0.6065023139570989 IEEAMDGS(ph)ETPQLFTVLPEK ddPTM_KYSE-520_SHP099_60min_R1 1 IEEAMDGSETPQLFTVLPEK 20 0 Q13435;E9PPJ0 Q13435 SF3B2 Splicing factor 3B subunit 2 1 IEEAMDGS(0.5)ET(0.5)PQLFTVLPEK 63.122 0.013725 45413000.0 76824.0 80798.0 62296.0 70449.0 50263.0 72794.0 69239.0 98922.0 75897.0 89022.0 True False 72562.4195751529 76916.3427997294 66311.6998371243 77144.45177873578 54218.41214265038 72339.66564443681 76238.35382752084 98578.86267056824 62116.0180076726 88233.3343380679 0.822392354539481 0.8717379137574333 0.7515492906915384 0.8743232062743449 0.6144889859303218 0.8198677539178769 0.8640538680699968 1.1172519253648652 0.7039971737855192 1.0 16.42903618497729 -6.908896108975102 3.875272982873792 0.9419185890910168 0.790076611655231 0.23655444703077566 0.11818827469296274 0.312000266937668 8.931396850165521 0.05068233759862268 0.03275082916737485 1.2333998492938582e-07 6.908896108975102 -0.15184197743578576 IEEAMDGSET(ph)PQLFTVLPEK ddPTM_KYSE-520_SHP099_60min_R1 1 IEEAMDGSETPQLFTVLPEK 20 0 Q13435;E9PPJ0 Q13435 SF3B2 Splicing factor 3B subunit 2 1 IEEAMDGS(0.468)ET(0.532)PQLFTVLPEK 88.22200000000001 0.0024132 31370000.0 61767.0 74734.0 56167.0 65430.0 59621.0 80336.0 64131.0 99867.0 88984.0 111250.0 True False 58340.661380538186 71143.66646197895 59787.61469037745 71648.44752775322 64312.83350291382 79834.5932248738 70613.98733824483 99520.58468613312 72826.7487040954 110264.41155119031 0.5290978345579208 0.6452096869800141 0.5422204122734652 0.6497876016369106 0.5832601162801885 0.7240286516906731 0.6404059691141801 0.9025630598856517 0.6604737437907202 1.0 16.75060770268811 -8.32449309972813 0.21806708757720256 1.1267739547000546 0.4955967916303253 0.7140140025362904 0.07721266747220523 2.3339285474291676 0.31651630869355957 0.47695947384792553 0.23023062538000896 4.737038345407582e-09 8.32449309972813 -0.6311771630697294 IEEAMDGSET(ph)PQLFTVLPEKR ddPTM_KYSE-520_SHP099_60min_R1 6 IEEAMDGSETPQLFTVLPEKR 21 1 Q13435;E9PPJ0 Q13435 SF3B2 Splicing factor 3B subunit 2 1 IEEAMDGS(0.164)ET(0.836)PQLFTVLPEKR;IEEAMDGSET(1)PQLFTVLPEKR;IEEAMDGSET(1)PQLFTVLPEKR;IEEAMDGSET(1)PQLFTVLPEKR;IEEAMDGSET(1)PQLFTVLPEKR;IEEAMDGS(0.135)ET(0.865)PQLFTVLPEKR 276.23 8.4289e-36 7636710000.0 11275870.0 11971100.0 10219240.0 8456980.0 7428580.0 10330380.0 8310030.0 11552020.0 13114070.0 13098990.0 True False 10650375.01321044 11395990.38701257 10877988.561762122 9260728.836516244 8013166.983161558 10265904.2665601 9150088.930477219 11511948.73888175 10732885.466802102 12982943.139460014 0.8203359514715868 0.8777663326873779 0.8378676887754251 0.7132996530169982 0.6172072770469548 0.790722423743672 0.7047777096601987 0.8866979247480979 0.8266912480099257 1.0 23.630114133172047 -8.08697993627365 1.1640620401373163 0.9958605960554894 0.769198657268472 0.4373881884818466 0.07709348751644525 0.6063834573640483 1.794338729124347 0.08046051022180495 0.025328767458060335 8.185026008023439e-09 8.08697993627365 -0.22666193878701735 IEEDKKETEDK ddPTM_KYSE-520_SHP099_60min_R1 4 IEEDKKETEDK 11 2 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 0 ;;; 129.71 0.00010197 2749990000.0 3830920.0 3606640.0 2271930.0 2024330.0 3462630.0 3532010.0 2506680.0 3299760.0 3151020.0 3094940.0 False True 3618411.2308503096 3433371.6007229886 2418382.2430165266 2216721.71456299 3735119.281330311 3509965.415457417 2760079.6772392713 3288313.902729775 2578874.198750098 3067521.239426887 1.1795879957872262 1.119265795650841 0.7883832105000711 0.7226426621180121 1.2176343665767586 1.1442350815191724 0.8997752458121346 1.0719775499726087 0.8407029642056906 1.0 21.54864190242499 -7.75425908250828 24.997468456664645 0.9203514747792286 1.0107480635213886 0.05352751865857108 0.16189700896351472 571.3356017628279 1989098.2854594567 0.12199875662631471 0.04395638443034421 1.76092523629118e-08 7.75425908250828 0.09039658874215994 IEEDRCS(ph)NSADITGPSFIR ddPTM_KYSE-520_SHP099_60min_R1 9 IEEDRCSNSADITGPSFIR 19 1 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 IEEDRCS(1)NSADITGPSFIR;IEEDRCS(1)NSADITGPSFIR;IEEDRCS(1)NSADITGPSFIR;IEEDRCS(1)NSADITGPSFIR;IEEDRCS(0.995)NS(0.005)ADITGPSFIR;IEEDRCS(0.975)NS(0.024)ADIT(0.001)GPSFIR;IEEDRCS(0.952)NS(0.047)ADIT(0.001)GPSFIR;IEEDRCS(0.997)NS(0.003)ADITGPSFIR;IEEDRCS(0.959)NS(0.041)ADITGPSFIR 266.19 2.18e-35 9368050000.0 6768750.0 6007998.0 5689278.0 5893700.0 5649391.0 5867276.0 5515868.0 5970380.0 6965110.0 5784680.0 True False 6393273.9443314085 5719364.757891152 6056017.963046648 6453835.475994476 6093965.931062217 5830656.154128474 6073465.767124009 5949670.145277171 5700421.600134659 5733432.235612941 1.1150866848342416 0.9975464124901644 1.056263981883309 1.1256495604686465 1.062882699338424 1.0169573676848627 1.0593071510288317 1.0377152638730216 0.9942424303415957 1.0 22.45096761526618 -7.387180507042667 0.8649194080013356 0.9952157252784944 1.0659930060822937 0.3368812471215922 0.036176381513102304 0.7584317744412721 1.0551339383343117 0.03431171269364462 0.014060114687251305 4.100336441228026e-08 7.387180507042667 0.0707772808037993 IEEEEEVEQELLSHS(ph)WGR ddPTM_KYSE-520_SHP099_60min_R1 2 IEEEEEVEQELLSHSWGR 18 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 IEEEEEVEQELLS(0.002)HS(0.998)WGR;IEEEEEVEQELLS(0.003)HS(0.997)WGR 243.24 7.2965e-24 227435000.0 322990.0 295100.0 243930.0 237000.0 256280.0 238100.0 235650.0 247280.0 322840.0 239860.0 True False 305073.1008353978 280922.95304586954 259654.1181017996 259524.4087433519 276447.7779662666 236613.92958128927 259471.80172237172 246422.243395586 264220.3941341161 237735.02700825606 1.2832484328226619 1.1816641265744725 1.0921996702353092 1.0916540654917424 1.1628399123393212 0.9952842564216342 1.0914327812256324 1.0365415921105654 1.1114070882156557 1.0 17.858994954781654 -1.0000000000240339 0.5100964288969198 1.0565535069562273 8.891527298451905 0.6962789089569332 0.045881315111253 61.08049445195865 0.6323550537472301 0.023734228547244926 515.2425665917449 0.09999999999446599 1.0000000000240339 7.834973791495678 IEEEEQEPEPPEPFEYIDD ddPTM_KYSE-520_SHP099_60min_R1 2 IEEEEQEPEPPEPFEYIDD 19 0 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 0 ; 131.13 7.2976e-05 314700000.0 377380.0 436670.0 1210170.0 182853.0 529670.0 378200.0 389130.0 259920.0 962420.0 570630.0 False True 356445.97911162133 415691.7177449675 1288179.4945404613 200231.29414324087 571352.0155899497 375839.5135138329 428467.057942824 259018.3981857838 787668.7886338622 565574.6621434226 0.6302368245436553 0.7349899943706341 2.277647109682214 0.3540315851215851 1.0102150146271263 0.6645267878328762 0.757578241427955 0.4579738370954461 1.3926875465897715 1.0 19.10935796300907 IEEELGS(ph)KAK ddPTM_KYSE-520_SHP099_60min_R1 1 IEEELGSKAK 10 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 IEEELGS(1)KAK 97.551 0.0016510000000000001 497930000.0 408450.0 457740.0 481880.0 339700.0 454970.0 390840.0 316980.0 336450.0 565010.0 416390.0 True False 385792.46427511127 435749.48331825243 512942.75583526137 371984.98586547124 490773.5505748097 388400.6225852628 349023.43182668043 335282.93347802066 462418.4267430216 412701.1085465184 0.934798710945614 1.0558476202133489 1.2428916356483304 0.9013423471905753 1.1891742968737173 0.9411184378766541 0.8457050989174641 0.8124110319423303 1.120468099471798 1.0 18.654737787975403 -6.4837363436270365 21.92288848461911 0.923927680977346 1.065127096771185 0.18453550949137487 0.12403823980953764 186.2812697884205 104332.18990462214 0.04262971191984767 0.03758104150294947 3.282945373631032e-07 6.4837363436270365 0.141199415793839 IEEELGSK ddPTM_KYSE-520_SHP099_60min_R1 5 IEEELGSK 8 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ;;;; 128.61 0.0062613 2241970000.0 2705546.0 3365560.0 3054720.0 2163457.0 3063610.0 3340930.0 2641478.0 3114560.0 3416780.0 3211120.0 False True 2555463.9700077637 3203873.4457914513 3251632.138924808 2369071.302812936 3304698.6774435476 3320078.0166149405 2908504.374580972 3103756.318303771 2796378.8820145135 3182671.9750135555 0.8029303648224319 1.0066615318651573 1.0216673802555347 0.7443655272714197 1.0383409611131766 1.043173171058824 0.913856155272987 0.9752045899391034 0.8786261681908338 1.0 21.601807041281404 IEEIKDFLLTAR ddPTM_KYSE-520_SHP099_60min_R1 2 IEEIKDFLLTAR 12 1 J3KSP2;J3KT73;J3QL01;P63173 J3KSP2 RPL38 60S ribosomal protein L38 0 ; 82.20200000000001 0.007947 384160000.0 235220.0 196373.0 147531.0 139786.0 254790.0 196592.0 145143.0 172415.0 164489.0 131397.0 False True 222171.87770055537 186938.94631811779 157041.08431794625 153071.2194118065 274840.5234432065 195364.99640590037 159815.47089917317 171816.93260696367 134621.94403025208 130232.924805319 1.7059578292714608 1.4354200107044113 1.2058477881280936 1.1753649827079269 2.110376649023715 1.500119856003735 1.2271510536838222 1.3193048751980905 1.0337013027350348 1.0 16.99073470365036 -7.40233931126927 1.3367574452035815 1.0123249860745789 1.502717178911208 0.35404067069100487 0.25668881031967855 0.5710218523861934 1.7893125817694029 0.24115157395798442 0.08538525897346211 3.9596854588958254e-08 7.40233931126927 0.49039219283662905 IEEIKTPDS(ph)FEESQGEEIGK ddPTM_KYSE-520_SHP099_60min_R1 1 IEEIKTPDSFEESQGEEIGK 20 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 IEEIKTPDS(1)FEESQGEEIGK 211.49 5.3051000000000005e-17 0.0 114590.0 122650.0 98627.0 96986.0 98781.0 108180.0 101820.0 111070.0 123950.0 112650.0 True False 108233.4642704983 116757.7098985967 104984.65422877943 106203.52028009573 106554.5027129925 107504.80849266663 112112.95926743845 110684.72409393288 101443.80452522513 111652.00864037387 0.9693821507422535 1.0457287004541769 0.9402845099449156 0.9512011612990549 0.9543447002032878 0.9628560184612067 1.0041284579890477 0.9913366131230422 0.9085712452515843 1.0 16.768649680182417 -4.773210594493577 24.998485323070295 0.9643583973205974 1.0075554395357778 0.22413317809368116 0.03234441577252763 282.71928539464153 600412.7365605051 0.008327745405926838 0.017559463110251475 1.6857353942794227e-05 4.773210594493577 0.04319704221518039 IEESPFSVEESS(ph)TTPCPLLTGGRPLPTLEVKPPDRPSSK ddPTM_KYSE-520_SHP099_60min_R1 1 IEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSK 39 3 Q12872-2;Q12872;H0YFR9 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 IEESPFSVEES(0.07)S(0.357)T(0.357)T(0.016)PCPLLT(0.054)GGRPLPT(0.054)LEVKPPDRPS(0.046)S(0.046)K 70.835 0.0068908 4079300000.0 840870.0 665690.0 725830.0 696540.0 798460.0 768690.0 868250.0 899510.0 864520.0 711240.0 True False 794225.2648672118 633709.2531789382 772618.1631690608 762738.9521776135 861294.2593840525 763892.3205789222 956021.1833034111 896389.8097572117 707544.9607756966 704938.9669363467 1.12665819612569 0.8989561974890228 1.0960071714106638 1.0819928929343552 1.221799758250311 1.083629018124485 1.3561758225088103 1.2715849907587138 1.0036967651975255 1.0 19.427138829948394 -5.382496766624132 1.9399530883030083 1.1757006271495078 1.0174267845069471 0.1429879326095328 0.1203262018764943 0.5122806908878381 3.7841752683070182 0.037418772060624564 0.06683014806810188 4.144796698786058e-06 5.382496766624132 -0.15827384264256072 IEESPFSVEESSTT(ph)PCPLLTGGRPLPTLEVKPPDRPSSK ddPTM_KYSE-520_SHP099_60min_R1 1 IEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSK 39 3 Q12872-2;Q12872;H0YFR9 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 IEESPFSVEES(0.002)S(0.014)T(0.066)T(0.656)PCPLLT(0.066)GGRPLPT(0.066)LEVKPPDRPS(0.066)S(0.066)K 47.59 0.041568 335680000.0 430780.0 368620.0 345340.0 398150.0 403290.0 408660.0 407460.0 445560.0 460630.0 335010.0 True False 406883.7746613598 350910.9418900997 367601.1689635362 435990.05629183736 435026.62859378627 406109.40135527024 448650.0332263841 444014.45635448594 376991.2035373495 332042.0720338358 1.2253982520019253 1.056826744095071 1.1070921426067863 1.3130566666485837 1.3101551436814793 1.223066097822347 1.3511842956475277 1.337223483863936 1.1353717955926177 1.0 18.341006527060337 -5.251437404832319 24.708971748802472 1.259658394787272 1.1224778032143177 0.15342410054605682 0.1091524951319836 828.3709787117208 2046410.8227346423 0.028202000874139797 0.048085276762483635 5.6048319437796265e-06 5.251437404832319 -0.13718059157295426 IEESPFSVEESSTTPCPLLTGGRPLPT(ph)LEVKPPDRPSSK ddPTM_KYSE-520_SHP099_60min_R1 2 IEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSK 39 3 Q12872-2;Q12872;H0YFR9 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 IEESPFSVEES(0.001)S(0.003)T(0.003)T(0.003)PCPLLT(0.075)GGRPLPT(0.392)LEVKPPDRPS(0.262)S(0.262)K;IEESPFSVEESSTTPCPLLTGGRPLPT(0.449)LEVKPPDRPS(0.275)S(0.275)K 254.14 3.1065999999999996e-32 6909200000.0 1074540.0 874630.0 865050.0 1028740.0 865850.0 1014520.0 996160.0 1025420.0 1126810.0 842810.0 True False 1014933.1241576152 832611.4619536059 920812.5071289374 1126511.1402980404 933987.4689874024 1008188.0043629128 1096861.5743847128 1021863.0573548278 922209.7085685269 835343.3590962575 1.2149891575790495 0.9967296117064878 1.1023161878310104 1.3485605985026228 1.1180880997220906 1.2069144901728228 1.313066731710643 1.2232850674246845 1.1039887951778877 1.0 19.6720097985441 -5.039059084765443 24.988591896782555 1.2020747253286084 1.0917751182839752 0.09827771453406453 0.10769158920144965 850.7823236536003 544298.798652768 0.027842830025242758 0.048235547240324764 9.139888869253555e-06 5.039059084765443 -0.11029960704463315 IEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 IEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSK 39 3 Q12872-2;Q12872;H0YFR9 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 IEESPFSVEESSTT(0.002)PCPLLT(0.006)GGRPLPT(0.006)LEVKPPDRPS(0.842)S(0.143)K 156.56 1.2251e-07 2454400000.0 252340.0 181380.0 187670.0 224050.0 225360.0 212990.0 192130.0 180480.0 252310.0 184270.0 True False 238342.1971726811 172666.23254306943 199767.50848261663 245343.64463691117 243094.54987700065 211660.65040537104 211552.37540810194 179853.9570043486 206496.86421750364 182637.51115989062 1.3050013420519273 0.9454039942096463 1.093792327840744 1.3433365527091763 1.3310220246276938 1.1589111626694912 1.158318321710471 0.9847591322403362 1.1306377474489633 1.0 17.47862357933464 -7.102241333422135 4.565714435432776 1.043991795346305 1.1908610954136707 0.2615482270419821 0.1182267342265845 0.3715776989670503 12.655247495010297 0.06220478695187188 0.03518872973515174 7.9023937726282e-08 7.102241333422135 0.14686930006736576 IEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 IEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSK 39 3 Q12872-2;Q12872;H0YFR9 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 IEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPS(0.171)S(0.829)K 187.3 2.2401999999999996e-15 304870000.0 60243.0 54304.0 46596.0 52168.0 60533.0 57335.0 49129.0 64624.0 64315.0 54365.0 True False 56901.20069855681 51695.154328034194 49599.652716236 57126.031035118904 65296.60271434365 56977.15099766163 54095.43877283423 64399.83442735495 52637.01724921226 53883.36839532998 1.0560067492641827 0.9593898055659521 0.9205002247137682 1.060179286046081 1.211813675701886 1.0574162806533043 1.003935729777477 1.1951709097855217 0.9768694648602232 1.0 15.717552419944 -5.436402150827816 7.11901109643657 1.0845263278234822 0.9778863329735966 0.2179772214826995 0.08010722305745799 0.35417783832386573 25.23045925948515 0.022159298680299307 0.03288594317614618 3.6609841545280574e-06 5.436402150827816 -0.10663999484988562 IEEVLS(ph)PEGS(ph)PSKS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 7 IEEVLSPEGSPSKSPSK 17 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 3 IEEVLS(1)PEGS(0.996)PS(0.004)KS(0.976)PS(0.024)K;IEEVLS(1)PEGS(0.998)PS(0.007)KS(0.97)PS(0.025)K;IEEVLS(1)PEGS(0.995)PS(0.007)KS(0.873)PS(0.125)K;IEEVLS(1)PEGS(0.994)PS(0.006)KS(0.995)PS(0.005)K;IEEVLS(1)PEGS(0.99)PS(0.018)KS(0.988)PS(0.004)K;IEEVLS(1)PEGS(0.993)PS(0.018)KS(0.96)PS(0.029)K;IEEVLS(1)PEGS(0.994)PS(0.006)KS(0.995)PS(0.005)K 132.48 0.00017071 7004160000.0 8500640.0 7558130.0 6545710.0 7987140.0 7729240.0 7512940.0 7771720.0 8278500.0 9237900.0 7408520.0 True False 8029092.553594279 7195026.089815581 6967656.940106297 8746235.384178799 8337487.2146401685 7466048.954676414 8557361.302277897 8249783.815716416 7560530.22850808 7342886.276541344 1.0934518459376377 0.9798634785890477 0.9488989312508067 1.191116824472796 1.1354509522061267 1.0167730608233092 1.1653947752965332 1.1235069569404035 1.0296401093207794 1.0 22.807915825630836 -5.2485236557778 24.963675377579243 1.1011155771965926 1.0046506287314867 0.2457130364422364 0.06925851150246426 988.919268738041 1911391.359368439 0.018579932085828574 0.03190366325499222 5.642562057877437e-06 5.2485236557778 -0.09646494846510589 IEEVLS(ph)PEGS(ph)PSKS(ph)PSKK ddPTM_KYSE-520_SHP099_60min_R1 3 IEEVLSPEGSPSKSPSKK 18 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 3 IEEVLS(0.998)PEGS(0.967)PS(0.043)KS(0.886)PS(0.106)KK;IEEVLS(1)PEGS(0.988)PS(0.041)KS(0.849)PS(0.122)KK;IEEVLS(1)PEGS(0.958)PS(0.089)KS(0.911)PS(0.042)KK 80.102 0.019727 4015240000.0 3582360.0 2944370.0 2662550.0 3331850.0 2878260.0 2918020.0 2739720.0 3037950.0 3692190.0 2921470.0 True False 3383639.349542384 2802918.045610529 2834182.2332306216 3648508.0222427677 3104762.6869407864 2899807.5547954384 3016677.6346905 3027412.060512863 3021781.36853563 2895588.0486692693 1.1685499776452695 0.9679961370536362 0.9787933178316341 1.2600231665963393 1.072239087451562 1.0014572190709614 1.0418186509910758 1.045525817080291 1.0435812407515481 1.0 21.46542493610424 -6.017457655302373 24.20510397315156 1.0310105186802998 1.0878211890450844 0.13452016281296264 0.08045890915198399 1273.9727810806876 1766367.6799776442 0.02741807761306632 0.028011470931383866 9.605994744496796e-07 6.017457655302373 0.0568106703647846 IEEVLS(ph)PEGS(ph)PSKSPSK ddPTM_KYSE-520_SHP099_60min_R1 3 IEEVLSPEGSPSKSPSK 17 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 2 IEEVLS(1)PEGS(0.915)PS(0.081)KS(0.004)PSK;IEEVLS(1)PEGS(0.927)PS(0.073)KSPSK;IEEVLS(1)PEGS(0.977)PS(0.022)KS(0.001)PSK 127.5 3.7593000000000004e-05 1487800000.0 3156000.0 2751200.0 2633630.0 2792880.0 3091200.0 2800510.0 2814550.0 3294540.0 3722100.0 2723470.0 True False 2980930.3886699756 2619028.22236461 2803398.0037569907 3058314.475490009 3334459.853477927 2783030.9782935586 3099072.1813609186 3283112.0096914135 3046260.466505368 2699342.1746275974 1.1043173469036864 0.9702468427241657 1.038548587914294 1.1329851043845287 1.2352860948197317 1.031003406849488 1.1480842297395912 1.2162637403108605 1.1285195686336547 1.0 21.3641764369584 -5.255373466659561 5.729272466159866 1.1380507142175138 1.0301380261707187 0.22433433665676694 0.07443070829026792 0.2004830745339957 26.622840864362935 0.020072774902886198 0.03296970859349275 5.554264191362536e-06 5.255373466659561 -0.1079126880467951 IEEVLS(ph)PEGSPSKS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 IEEVLSPEGSPSKSPSK 17 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 2 IEEVLS(0.669)PEGS(0.331)PS(0.016)KS(0.983)PS(0.001)K 98.54299999999999 0.00068378 275490000.0 793980.0 686210.0 636690.0 600200.0 667990.0 622680.0 506200.0 590000.0 680770.0 553820.0 True False 749936.34664011 653243.4415777912 677732.056140018 657242.8275432895 720557.0126568055 618793.6231485816 557371.6360359199 587953.4277070347 557159.3288151476 548913.5856654403 1.3662193216277798 1.1900660844199606 1.2346789619324376 1.197352087298993 1.3126966274359637 1.127306081153788 1.015408710207502 1.0711220182212597 1.01502193307843 1.0 19.066219521035865 -6.503834749919971 3.7426675638498543 1.0328789056011483 1.2508557438627366 0.8155755085134757 0.052547231444490576 0.0979379049922516 2.9815063808608 0.019748029848450376 0.016097231806943946 3.13447817381291e-07 6.503834749919971 0.2179768382615883 IEEVLSPEGS(ph)PSKS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 5 IEEVLSPEGSPSKSPSK 17 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 2 IEEVLSPEGS(0.986)PS(0.406)KS(0.579)PS(0.029)K;IEEVLS(0.001)PEGS(0.995)PS(0.006)KS(0.985)PS(0.013)K;IEEVLSPEGS(0.998)PS(0.002)KS(0.997)PS(0.003)K;IEEVLS(0.02)PEGS(0.98)PSKS(1)PSK;IEEVLS(0.038)PEGS(0.96)PS(0.071)KS(0.877)PS(0.055)K 207.17 5.6655999999999996e-14 4431720000.0 8048170.0 7569530.0 6079170.0 6536860.0 7277680.0 6411530.0 5916770.0 6011970.0 7585090.0 6031890.0 True False 7601721.966470856 7205878.416703823 6471043.025215902 7158121.209021378 7850392.011665115 6371513.263033704 6514894.85371049 5991115.879274342 6207828.860558615 5978452.147339417 1.271520082309907 1.2053083706475172 1.0823943833180472 1.197320147859166 1.3131144681251259 1.0657463012176507 1.0897293635794687 1.0021182292042867 1.0383672408118676 1.0 22.51134058076921 -6.420076404040868 6.645442747329569 1.038809143802656 1.205011057325302 0.6760451847795497 0.060586794396908616 0.16958596822193261 9.423091898707225 0.022839252544520124 0.02004453412387092 3.801225166976951e-07 6.420076404040868 0.1662019135226458 IEEVLSPEGSPS(ph)KSPSK ddPTM_KYSE-520_SHP099_60min_R1 1 IEEVLSPEGSPSKSPSK 17 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 IEEVLSPEGS(0.094)PS(0.604)KS(0.299)PS(0.002)K 69.729 0.029193 149690000.0 298730.0 271240.0 260370.0 220330.0 255580.0 305010.0 259860.0 314310.0 362970.0 312180.0 True False 282158.8513965087 258209.2232604599 277153.8668067299 241270.0969553697 275692.6919487215 303106.31945228495 286129.18478920177 313219.73197050527 297063.79772909236 309414.3280723651 0.9119126872835639 0.8345095874166194 0.8957370155848432 0.779763815265019 0.8910146264598423 0.9796130687955574 0.9247444569609025 1.0122987320007049 0.9600841679820845 1.0 18.239180479757476 -6.148140603910844 3.998679856496936 0.9730006847867327 0.8548340191315364 0.6694477888179805 0.04006463934112395 0.140173114617777 3.897995315810409 0.01314225452546518 0.013158490294956577 7.109832937913437e-07 6.148140603910844 -0.11816666565519629 IEEVLSPEGSPS(ph)KSPSKK ddPTM_KYSE-520_SHP099_60min_R1 1 IEEVLSPEGSPSKSPSKK 18 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 IEEVLSPEGS(0.004)PS(0.379)KS(0.379)PS(0.238)KK 66.059 0.019236000000000003 465590000.0 910840.0 851810.0 738320.0 692210.0 762880.0 833140.0 774650.0 922070.0 1038800.0 802050.0 True False 860313.8894854761 810887.7690071225 785913.2885537676 757997.4302794753 822914.3158065601 827940.064222408 852959.1818554427 918871.5543827551 850180.1060169734 794944.4609854578 1.0822314409474376 1.0200558766104244 0.9886392410100013 0.953522500603148 1.0351846653367827 1.0415068031243933 1.0729795900433932 1.1558940271672191 1.0694836529372662 1.0 19.600494544066763 -6.563402987115392 2.1718388190443507 1.0882104987589305 1.01114718323507 0.23933407313539123 0.04718817983285179 0.370143503804745 3.529596466366849 0.021287125511650663 0.015967727530727262 2.732731814489259e-07 6.563402987115392 -0.07706331552386048 IEEVLSPEGSPSKS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 10 IEEVLSPEGSPSKSPSK 17 1 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 IEEVLSPEGSPS(0.016)KS(0.918)PS(0.066)K;IEEVLSPEGSPS(0.063)KS(0.896)PS(0.04)K;IEEVLSPEGSPSKS(0.995)PS(0.005)K;IEEVLSPEGS(0.026)PS(0.102)KS(0.872)PSK;IEEVLSPEGSPS(0.017)KS(0.822)PS(0.161)K;IEEVLSPEGS(0.001)PS(0.022)KS(0.947)PS(0.03)K;IEEVLSPEGS(0.016)PS(0.106)KS(0.864)PS(0.013)K;IEEVLSPEGS(0.007)PS(0.152)KS(0.841)PS(0.001)K;IEEVLSPEGSPSKS(1)PSK;IEEVLSPEGSPS(0.001)KS(0.994)PS(0.006)K 392.88 2.9141e-86 11916150000.0 13990910.0 13461350.0 10403460.0 9723780.0 10553520.0 12391710.0 10623510.0 12910780.0 15282690.0 12590190.0 True False 13214806.332112383 12814646.540101722 11074083.67772455 10647925.127638934 11384021.98268516 12314368.74141856 11697438.066266201 12865995.517578706 12507738.741263513 12478650.711619586 1.0589932066779721 1.0269256537623312 0.8874423953074378 0.8532913833163102 0.9122798807153761 0.9868349572403646 0.9373960644137629 1.0310406000544947 1.0023310236271652 1.0 23.57295861148119 -7.257228803465322 24.54114340133122 1.0125143596034523 0.948317879375417 0.17346216086714872 0.058880549397254185 512.6942026030904 2988240.778068185 0.032390568000624106 0.017804166876246967 5.530586593297729e-08 7.257228803465322 -0.06419648022803526 IEEVLSPEGSPSKS(ph)PSKK ddPTM_KYSE-520_SHP099_60min_R1 2 IEEVLSPEGSPSKSPSKK 18 2 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 IEEVLSPEGSPS(0.1)KS(0.9)PSKK;IEEVLSPEGS(0.051)PS(0.112)KS(0.833)PS(0.004)KK 199.33 5.1815e-13 3784400000.0 2574900.0 2417270.0 1954430.0 1846680.0 1964970.0 2084780.0 1986250.0 2296460.0 2759400.0 2055610.0 True False 2432065.1640641093 2301140.7208037605 2080415.6849985644 2022187.9119754115 2119601.959850061 2071768.114710126 2187039.5339319366 2288494.1162577956 2258362.5188132823 2037398.894640382 1.1937108488975545 1.129450264676781 1.0211135828488684 0.9925341165615704 1.040347064792233 1.0168691659547653 1.073446903149502 1.1232430341834136 1.108453786224274 1.0 20.95829703709974 -4.556199872208559 3.784829121315674 1.049351082952776 1.18432810726148 0.5663217168318928 0.04173157728414021 0.1702715877698809 5.087508641910143 0.012154888874728176 0.0427111219510665 2.7784342747585678e-05 4.556199872208559 0.13497702430870406 IEEVPELPLVVEDKVEGYK ddPTM_KYSE-520_SHP099_60min_R1 2 IEEVPELPLVVEDKVEGYK 19 1 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 ; 194.49 6.9386e-13 176967000.0 487140.0 416950.0 337750.0 331250.0 470060.0 422820.0 335840.0 389220.0 412220.0 371660.0 False True 460117.3731104858 396919.09614529053 359521.9054191068 362731.90040605556 507051.04772445414 420181.0235428844 369789.98468254274 387869.8866646307 337371.23922055913 368367.3815471047 1.2490719758574733 1.077508802430529 0.9759873523794431 0.9847014653757326 1.3764819392935728 1.1406575190728554 1.003861913966061 1.0529430837106628 0.9158553556062293 1.0 18.490785792750817 -6.767481255672992 20.307714884850725 0.9975765382293541 1.1285412454423183 0.2634218688575448 0.11511086818497511 23.72531328957668 79733.79422642167 0.05052267604978503 0.03527616408296386 1.708121441687014e-07 6.767481255672992 0.13096470721296416 IEFADLS(ph)PS(ph)PSSFEK ddPTM_KYSE-520_SHP099_60min_R1 1 IEFADLSPSPSSFEK 15 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 2 IEFADLS(0.995)PS(0.953)PS(0.042)S(0.01)FEK 76.85 0.013781 25241000.0 194200.0 211140.0 205510.0 216730.0 223180.0 199460.0 216310.0 229030.0 275000.0 239620.0 True False 183427.33887189775 200996.51747239876 218757.503427626 237327.95403774938 240742.99627950392 198215.09615406994 238176.72578216076 228235.54838600408 225066.93218585648 237497.1532215388 0.7723348948978584 0.8463112704551367 0.921095265607532 0.9992875738445942 1.0136668714295591 0.8345998824212165 1.0028613924478835 0.961003301682124 0.9476615998673157 1.0 17.85755069500552 -4.647597381239366 2.048044050940483 0.96203334866468 0.7730119484388435 0.6252997697233429 0.049094489959528684 0.24946084590717602 1.8626584484630075 0.013661982006382675 0.06583233404457647 2.251140590067817e-05 4.647597381239366 -0.18902140022583658 IEGVYAR ddPTM_KYSE-520_SHP099_60min_R1 3 IEGVYAR 7 0 C9K025;P18077;F8WBS5;F8WB72 C9K025 RPL35A 60S ribosomal protein L35a 0 ;; 163.84 0.0065757 1348070000.0 1409480.0 1391750.0 960520.0 871760.0 1169860.0 1369430.0 960190.0 1041260.0 1073610.0 1160750.0 False True 1331293.3346712808 1324888.2409406588 1022436.6560863378 954611.8082957985 1261921.3264071192 1360882.8794057325 1057255.3757513415 1037648.112091911 878669.4875056645 1150466.6580498344 1.157176807651225 1.151609420116953 0.8887147219194328 0.8297605164098966 1.0968777909185239 1.1828964098034587 0.9189795882859428 0.901936709622543 0.7637505019007717 1.0 20.13378774240101 -6.978833959180575 24.424844188897996 0.8817977534087501 1.0412477826484412 0.28429223355319644 0.12045080402384811 258.58209172652096 298393.45732972515 0.054851435780303846 0.03697673135867951 1.0499437696997289e-07 6.978833959180575 0.1594500292396911 IEHAPS(ph)PSSGGTLK ddPTM_KYSE-520_SHP099_60min_R1 4 IEHAPSPSSGGTLK 14 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YCQ1;A0A2R8YD28;A0A2R8Y7Y0 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 IEHAPS(0.961)PS(0.033)S(0.004)GGT(0.002)LK;IEHAPS(0.975)PS(0.025)SGGTLK;IEHAPS(0.855)PS(0.145)SGGTLK;IEHAPS(0.497)PS(0.497)S(0.006)GGT(0.001)LK 181.51 2.1316e-09 2834210000.0 4215990.0 3899530.0 3316510.0 3087680.0 3271910.0 3880590.0 3487390.0 4047230.0 4408120.0 3814440.0 True False 3982120.6303323032 3712190.7254861374 3530297.541203618 3381132.1788551593 3529390.702378676 3856369.7983782273 3839929.4148465176 4033191.103760583 3607716.52766225 3780647.0291894176 1.0532907726077994 0.9818929661577115 0.93378131149168 0.8943263289987916 0.9335414480984722 1.0200290502139377 1.0156804867525044 1.0667991676084374 0.9542590196355241 1.0 21.85020173126272 -6.27240544259093 24.150748746954925 1.0157989325567969 0.9555832827412482 0.2336003789985459 0.04648465986927248 652.9055326286112 1437899.9306665778 0.01729352632173076 0.015400862966058379 5.340655411271109e-07 6.27240544259093 -0.06021564981554872 IEHAPSPS(ph)SGGTLK ddPTM_KYSE-520_SHP099_60min_R1 1 IEHAPSPSSGGTLK 14 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YCQ1;A0A2R8YD28;A0A2R8Y7Y0 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 IEHAPS(0.277)PS(0.72)S(0.002)GGTLK 194.2 7.278299999999999e-11 1149200000.0 1517900.0 1447500.0 1202900.0 1081600.0 1178100.0 1376400.0 1167200.0 1312100.0 1486900.0 1435400.0 True False 1433699.061141369 1377959.9272582028 1280440.8587080506 1184394.9388051021 1270809.7675279307 1367809.377050345 1285191.966774249 1307548.631346441 1216916.4416987265 1422683.472724303 1.0077428244780071 0.9685639523312527 0.9000180878295638 0.8325076951495747 0.8932484223595086 0.9614291606488693 0.9033576276198874 0.9190720609431207 0.8553669632279117 1.0 20.44018328731887 -4.61751379158415 3.4670822244305657 0.9037464229865229 1.0011930655862307 0.34406494744572114 0.04525881516643184 0.24126531096137105 5.475729478632745 0.011757316454751924 0.03912744377809909 2.4126049159790922e-05 4.61751379158415 0.09744664259970781 IEHLKDDMEAYR ddPTM_KYSE-520_SHP099_60min_R1 2 IEHLKDDMEAYR 12 1 Q9BYX2-2;Q9BYX2;Q9BYX2-3;Q9BYX2-4;Q9BYX2-5 Q9BYX2-2 TBC1D2 TBC1 domain family member 2A 0 ; 180.28 5.765e-07 1366310000.0 1091350.0 925810.0 640050.0 744660.0 1072740.0 916100.0 662140.0 780170.0 834910.0 729810.0 False True 1030810.6399477111 881332.6979308587 681308.647116208 815432.262509807 1157158.5349443287 910382.2800899603 729075.573063658 777463.7723630476 683311.3903683395 723344.4511835882 1.4250619303998595 1.2184135739048785 0.9418868783764108 1.1273083814710103 1.5997337548534487 1.258573669294521 1.007923088192205 1.0748181880581311 0.9446556052932407 1.0 19.46432328575779 -6.761274424471257 24.999704701758585 1.0130841600974376 1.2545580044673146 0.3636774362841283 0.1649810675565699 5.8553298288469975 887616.0929227552 0.07203877412257707 0.05221760727024553 1.732708777870462e-07 6.761274424471257 0.24147384436987696 IEHSFWR ddPTM_KYSE-520_SHP099_60min_R1 3 IEHSFWR 7 0 Q16531;Q16531-2 Q16531 DDB1 DNA damage-binding protein 1 0 ;; 161.6 0.0016230999999999997 2688990000.0 2391670.0 2062095.0 1421313.0 1367901.0 2274610.0 2020180.0 1655137.0 1624282.0 1559114.0 1679477.0 False True 2258999.2974240566 1963028.8609323022 1512933.1101612048 1497905.8997655686 2453608.8662394625 2007571.3072722754 1822454.4005404678 1618647.7448522702 1276018.199665524 1664598.1403933326 1.3570838766468112 1.1792809407251006 0.9088879011986097 0.8998603707508793 1.4739947178240222 1.2060396191466973 1.0948314528993977 0.9723955022981075 0.7665623123692846 1.0 20.66674249987138 -7.296660630532314 2.7377181452473605 0.8823115002715266 1.1591237247945585 0.3087065515192551 0.17352509042955147 0.3824941194465542 5.604821703799487 0.12049361502837709 0.052009484758546214 5.050558076866872e-08 7.296660630532314 0.2768122245230319 IEHYFS(ph)PVSK ddPTM_KYSE-520_SHP099_60min_R1 1 IEHYFSPVSK 10 0 Q96PZ2;E9PNQ0;E9PR18 Q96PZ2 FAM111A Protein FAM111A 1 IEHYFS(0.999)PVS(0.001)K 116.71 0.0005767000000000001 400270000.0 1147100.0 1039100.0 1140900.0 841880.0 1020100.0 905970.0 908560.0 1112500.0 1215000.0 1066700.0 True False 1083468.076312841 989180.076279103 1214444.2395045436 921892.0220795476 1100376.0664249584 900315.5051774918 1000406.1114910991 1108640.9971594515 994386.6276575108 1057249.8678800412 1.0247984977149929 0.9356161739349004 1.1486823279909248 0.871971754347997 1.0407909235603805 0.8515636015001558 0.9462343215961586 1.0486083099565269 0.9405407916024795 1.0 20.01188494940352 -4.206524342021781 20.486045237966636 0.9768711388237594 1.024801070264445 0.029633909464937047 0.08363751039623922 22200.107266644758 8279281.032201838 0.019941603666534986 14.037185791416054 6.215494091950383e-05 4.206524342021781 0.04792993144068558 IEKLS(ph)DDEEVDITDEVDELSSQTPQK ddPTM_KYSE-520_SHP099_60min_R1 4 IEKLSDDEEVDITDEVDELSSQTPQK 26 1 A0A590UK32;A0A590UJW2;A0A590UJD8;Q5VVJ2 A0A590UK32 MYSM1 Histone H2A deubiquitinase MYSM1 1 IEKLS(1)DDEEVDITDEVDELSSQTPQK;IEKLS(1)DDEEVDITDEVDELSSQTPQK;IEKLS(1)DDEEVDITDEVDELSSQTPQK;IEKLS(1)DDEEVDITDEVDELSSQTPQK 292.97 3.065199999999999e-49 750070000.0 812540.0 753091.0 703440.0 619558.0 681780.0 630231.0 622983.0 694614.0 960750.0 714340.0 True False 767466.7864416677 716911.377947363 748784.867943794 678440.606043095 735432.2072024383 626297.4945566799 685960.201368165 692204.5461581262 786302.0185365888 708011.5033481099 1.0839750241520092 1.0125702401121544 1.0575885623367294 0.9582338744989632 1.038729178445066 0.8845866085437689 0.9688545992887592 0.9776741520226235 1.110578027077599 1.0 19.43341327498301 -4.630530553658931 1.0776574157936203 0.9873145650320387 1.0859477087335976 0.16596507014232886 0.05770576078262996 1.8129907684939777 2.652162149034456 0.01941117942869639 0.17861120919126364 2.3413667486058285e-05 4.630530553658931 0.09863314370155885 IEKS(ph)LVEPK ddPTM_KYSE-520_SHP099_60min_R1 2 IEKSLVEPK 9 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 IEKS(1)LVEPK;IEKS(1)LVEPK 95.417 0.0051064 1056210000.0 981350.0 782170.0 855090.0 737290.0 776380.0 736140.0 707730.0 703980.0 969840.0 822830.0 True False 926912.5592272759 744593.3791388946 910210.4695923734 807361.8199256788 837476.6890020671 731545.4772027317 779274.2551791812 701538.0576901671 793741.5036768395 815540.3663520537 1.1365624529088545 0.9130061611413449 1.1160826700262343 0.9899716227867936 1.0268978993009696 0.8970070733285285 0.955531188069706 0.8602125494145388 0.9732706514912053 1.0 19.6373967614226 -6.245796222350892 21.248537544548622 0.9296130245299554 1.03147912663177 0.3383682015667897 0.06884156594282574 123.53521138440112 167800.2818912947 0.021060893183383073 0.020943482744720163 5.678109685505615e-07 6.245796222350892 0.10186610210181457 IELNDS(ph)VNENSDTVGQIVHYIMK ddPTM_KYSE-520_SHP099_60min_R1 1 IELNDSVNENSDTVGQIVHYIMK 23 0 D6RBN9;Q8IUW5 D6RBN9 RELL1 RELT-like protein 1 1 IELNDS(0.999)VNENS(0.001)DTVGQIVHYIMK 185.02 4.1231e-15 66886000.0 87724.0 140300.0 98293.0 159150.0 135020.0 132540.0 124800.0 184330.0 214410.0 107630.0 True False 82857.77484654158 133559.77740540664 104629.12405436065 174275.56814980786 145645.3058412878 131712.76869678346 137416.00193062567 183690.60225294533 175478.54883625283 106676.48193487286 0.7767201668417144 1.2520077057560477 0.980807785902031 1.6336831229230542 1.3652991099782033 1.2346935923252091 1.2881564843366284 1.7219409463192685 1.6449600291785433 1.0 16.702882626834207 -3.805896109027255 0.7100137841333287 1.432669907980914 5.691973947193433e-16 0.37393476806237314 0.23525593365639622 5.493924294031084 1.3410218456976517 0.09620666885872795 7.298008215070794 0.00015635216201183877 3.805896109027255 -1.4326699079809133 IENHEGVR ddPTM_KYSE-520_SHP099_60min_R1 10 IENHEGVR 8 0 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BR70;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;;;;;;;; 150.53 0.00069341 13016761000.0 3725221.0 3290433.0 2562765.0 2127129.0 3430157.0 3161339.0 2534527.0 2964311.0 2985494.0 2771965.0 False True 3518575.565086044 3132355.6596393757 2727964.93246898 2329290.700615347 3700090.8409764133 3141607.910661836 2790741.7237598007 2954028.497016389 2443403.5477792067 2747407.546656135 1.2806893427109116 1.1401132181688007 0.992923287187291 0.8478140432606449 1.3467571804116893 1.143480847785208 1.015772751718764 1.0752057883118695 0.8893487792712329 1.0 21.389639503010088 -4.420173133864155 3.2261787562583675 1.0490941660411401 1.2817707861291554 0.24385438233103152 0.13101532328717527 0.4304155242586362 7.522392598462674 0.034934072429844656 0.19774703724500833 3.800378619509093e-05 4.420173133864155 0.23267662008801526 IEPEPFENCLLRPGS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 11 IEPEPFENCLLRPGSPAR 18 1 A0A2R8Y5T7;A0A2R8Y430;P48637-2;P48637 A0A2R8Y5T7 GSS Glutathione synthetase 1 IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR;IEPEPFENCLLRPGS(1)PAR 260.06 6.0089e-30 14848519000.0 5896152.0 5718792.0 5057845.0 4223383.0 4360903.0 5103898.0 4606659.0 4746557.0 6186723.0 4820550.0 True False 5569080.694872387 5444052.648238201 5383881.781538128 4624772.050513597 4704081.255956077 5072042.679387168 5072345.048379283 4730092.301621731 5063370.0577952 4777843.677331146 1.1656054636729383 1.139437163687028 1.1268434350588692 0.967962194421762 0.9845615666069109 1.0615756860049383 1.061638971665277 0.990005663865485 1.0597605111734307 1.0 22.187928221438113 -5.137057481216764 5.464566035613394 1.020044070289024 1.1477804370903288 0.7568188200210604 0.03286493794516735 0.11521691959686489 4.642775198483235 0.009446496208379944 0.016736213096586062 7.293609690082517e-06 5.137057481216764 0.12773636680130473 IEPGS(ph)LNEEPFMK ddPTM_KYSE-520_SHP099_60min_R1 1 IEPGSLNEEPFMK 13 0 F5H7T0;F6RJM5;Q96S38-2;Q96S38;A0A087X1U5 F5H7T0 RPS6KC1 Ribosomal protein S6 kinase delta-1 1 IEPGS(1)LNEEPFMK 97.2 0.0031064 0.0 120530.0 146720.0 121530.0 133540.0 98401.0 120170.0 145160.0 136730.0 144950.0 111370.0 True False 113843.96062940179 139671.3509687902 129364.01825487503 146231.60144973497 106144.59887489675 119419.97445520175 159834.1894250772 136255.71554302203 118630.73389214506 110383.34844454876 1.031350853490293 1.2653298974614304 1.1719522924226315 1.3247614201810034 0.9615997373754127 1.0818658442418292 1.447991854544711 1.234386503608108 1.0747158476691743 1.0 16.752163029448276 -4.239014220503176 22.63198006043062 1.1846989878275636 1.03135024718429 0.07717423963445713 0.14304937510518032 4113.072057919031 4150769.2626163773 0.035853690027492335 1.4982379596384952 5.767475781072972e-05 4.239014220503176 -0.15334874064327364 IEPIPGES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 IEPIPGESPK 10 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 IEPIPGES(1)PK;IEPIPGES(1)PK;IEPIPGES(1)PK;IEPIPGES(1)PK;IEPIPGES(1)PK;IEPIPGES(1)PK 175.54 2.8733e-05 4003320000.0 8101200.0 7645360.0 6504750.0 5630460.0 6310290.0 7184180.0 5990970.0 7466470.0 8813560.0 7808760.0 True False 7651810.286658176 7278065.429680677 6924056.592967977 6165577.225540478 6806873.922361292 7139340.867783745 6596595.7138327025 7440570.558257199 7213239.675767189 7739580.461523344 0.9886595694299569 0.9403695026962962 0.8946294476025317 0.7966293852996442 0.8794887469935971 0.9224454611301429 0.8523195471159075 0.9613661354445959 0.9319936282886634 1.0 22.883823933822512 -7.855643170057788 1.2851597874265703 0.9953375236633661 0.895284991152241 0.2638573828776999 0.051028829335981254 0.5965441051434971 2.1351515801348313 0.05150488764787284 0.016142689446537795 1.3943019345618834e-08 7.855643170057788 -0.10005253251112511 IEQLQNHENEDIYK ddPTM_KYSE-520_SHP099_60min_R1 1 IEQLQNHENEDIYK 14 0 O00629;H7C4F6 O00629 KPNA4 Importin subunit alpha-3 0 177.88 1.6915e-08 323810000.0 189890.0 206430.0 151000.0 137580.0 182290.0 222610.0 132100.0 157150.0 152890.0 183630.0 False True 179356.42316366985 196512.792942253 160733.7016085423 150655.56183506476 196635.18591177886 221220.6084170133 145453.95717176024 156604.88332908586 125129.03004325676 182003.181061978 0.9854576283619635 1.0797217487936874 0.8831367708557097 0.8277633443327655 1.0803942258834378 1.215476603904415 0.7991835984571525 0.860451352637385 0.6875101265435919 1.0 17.473604140587344 -6.862694475411577 23.312211270868406 0.8251439201345113 1.004292361155145 0.3212915239265135 0.12398383697434157 9.420932789294493 2151.4839340254025 0.05385247600022814 0.03630734428245029 1.371846515810387e-07 6.862694475411577 0.17914844102063376 IERPCCS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 IERPCCSPK 9 1 O94964-2;H0YDM2;O94964-3;O94964 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 IERPCCS(1)PK;IERPCCS(1)PK 105.36 0.0025604 2472380000.0 3350800.0 3025700.0 2957100.0 2993000.0 2900800.0 2909100.0 2601500.0 2845200.0 3398900.0 2813400.0 True False 3164924.4443458067 2880340.8303317083 3147719.397527292 3277453.8201217344 3129076.4567057355 2890943.2278241445 2864485.008193289 2835330.6652746745 2781745.43929639 2788475.464792078 1.1350017184324763 1.0329446562107298 1.128831663491793 1.175356879235126 1.1221459525874131 1.0367468763221508 1.0272584587388072 1.016803160391476 0.9975864856690824 1.0 21.411045146388965 -6.367151527623311 3.38574680833913 1.0135694064381258 1.117968230747008 0.6987442127938093 0.03414924652039697 0.16473562330978803 3.5443187808160985 0.0139339748787302 0.012146965825387839 4.29386585393718e-07 6.367151527623311 0.10439882430888225 IERPGEGS(ph)PMVDNPMR ddPTM_KYSE-520_SHP099_60min_R1 6 IERPGEGSPMVDNPMR 16 1 A0A087WVR3;A0A087WTW0;Q96T88;Q96T88-2 A0A087WVR3 UHRF1 E3 ubiquitin-protein ligase UHRF1 1 IERPGEGS(1)PMVDNPMR;IERPGEGS(1)PMVDNPMR;IERPGEGS(1)PMVDNPMR;IERPGEGS(1)PMVDNPMR;IERPGEGS(1)PMVDNPMR;IERPGEGS(1)PMVDNPMR 143.04 9.3064e-06 7585020000.0 1616520.0 1532200.0 1460410.0 1348500.0 1582160.0 1476680.0 1418050.0 1593300.0 1736900.0 1444970.0 True False 1526848.413147273 1458590.812120911 1554550.365338618 1476661.0345586895 1706666.9907410154 1467463.4923733675 1561400.3328343255 1587773.2141790146 1421522.7436858683 1432168.6899696484 1.0661093374270256 1.0184490293191806 1.0854519975377783 1.0310664134055214 1.1916661791965193 1.0246443052769623 1.0902349309615307 1.1086495782928085 0.9925665556310929 1.0 20.449770001765287 -7.774452086595088 24.933705852632567 0.996283189482164 1.0763442716612648 0.3136135536879887 0.04777645072788991 302.94182152339664 580450.0439608216 0.04379396072194779 0.011589696874677147 1.6809233628315233e-08 7.774452086595088 0.0800610821791008 IES(ph)DEEEDFENVGK ddPTM_KYSE-520_SHP099_60min_R1 8 IESDEEEDFENVGK 14 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK;IES(1)DEEEDFENVGK 338.78 5.3782e-54 33645530000.0 14161050.0 12981160.0 11631570.0 11587210.0 12650560.0 12086550.0 12000960.0 12309700.0 15092290.0 11940900.0 True False 13375508.327146688 12357525.588481585 12381359.61337003 12688454.954578266 13646087.100159694 12011113.358171921 13214134.154882696 12267000.523805568 12351910.581670118 11835112.915879613 1.1301546865007321 1.0441409115667186 1.0461547516591496 1.0721025684134955 1.1530170600949847 1.0148710403984538 1.1165194830674408 1.0364920563914921 1.0436664752980176 1.0 23.496570134745614 -7.849793864806296 1.2611488021167419 1.0018625259394827 1.0795556632647247 0.28257349190913594 0.041049647187734524 0.5677122307826511 1.9526049067230953 0.03756635020034402 0.011849380745420354 1.4132081559828902e-08 7.849793864806296 0.07769313732524208 IES(ph)DVQEPT(ph)EPEDDLDIMLGNKK ddPTM_KYSE-520_SHP099_60min_R1 3 IESDVQEPTEPEDDLDIMLGNKK 23 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 2 IES(1)DVQEPT(1)EPEDDLDIMLGNKK;IES(1)DVQEPT(1)EPEDDLDIMLGNKK;IES(1)DVQEPT(1)EPEDDLDIMLGNKK 136.66 1.3199e-06 164060000.0 550380.0 418810.0 383450.0 306154.0 339490.0 345730.0 292479.0 326639.0 487380.0 340193.0 True False 519849.3242446704 398689.7389533742 408167.8005416928 335250.78411144327 366205.93156612985 343572.1708279684 322045.63163996406 325505.9655471157 398884.07784997404 337179.15468614886 1.5417599724649453 1.1824270077563968 1.2105368759276391 0.9942808725038161 1.0860871037742517 1.018960294706742 0.9551172638170017 0.965379861190118 1.1830033746340607 1.0 18.36315582222182 -1.000000000000179 0.6876975704904629 1.0198706896196477 61.00693964193515 0.8143355505705396 0.07289691170147719 104.77156317798465 0.5835212559392147 0.028212967482937567 9642.087576813225 0.09999999999995879 1.000000000000179 59.9870689523155 IES(ph)DVQEPTEPEDDLDIMLGNKK ddPTM_KYSE-520_SHP099_60min_R1 6 IESDVQEPTEPEDDLDIMLGNKK 23 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 IES(1)DVQEPTEPEDDLDIMLGNKK;IES(1)DVQEPTEPEDDLDIMLGNKK;IES(1)DVQEPTEPEDDLDIMLGNKK;IES(1)DVQEPTEPEDDLDIMLGNKK;IES(1)DVQEPTEPEDDLDIMLGNKK;IES(1)DVQEPTEPEDDLDIMLGNKK 219.93 3.4354e-21 1932882000.0 1785745.0 1649821.0 1416431.0 1194355.0 1285062.0 1306313.0 1162119.0 1223624.0 1732061.0 1302617.0 True False 1686686.1650555981 1570561.1227281906 1507736.4086297292 1307866.1401040752 1386189.0683974018 1298159.8160147953 1279597.3297084672 1219379.533939988 1417562.3841046062 1291076.8268006893 1.3064181232616774 1.2164737915868788 1.1678130823290556 1.0130041163739187 1.0736689247474158 1.0054861097860905 0.9911085871468482 0.9444670593009027 1.0979690400123983 1.0 20.300143421515788 -4.819215248581641 0.9919317609469972 1.0058886937844707 1.3433303171329525 0.8487101746205117 0.0427235030604688 0.3195405780661121 0.44776248134264546 0.014872460477491184 0.09591101517003318 1.516298660852635e-05 4.819215248581641 0.3374416233484818 IES(ph)PKLER ddPTM_KYSE-520_SHP099_60min_R1 13 IESPKLER 8 1 Q92598-2;Q92598-3;Q92598;Q92598-4;A0A0A0MSM0;Q5TBM3 Q92598-2 HSPH1 Heat shock protein 105 kDa 1 IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER;IES(1)PKLER 133.91 0.0004954 222211900000.0 182949900.0 174581100.0 168144500.0 140985900.0 159285600.0 145782600.0 128524000.0 139532800.0 205051400.0 132505900.0 True False 172801304.3454162 166193961.90442652 178983363.51071206 154385157.54704338 171820470.5089101 144872716.7180904 141516460.1933635 139048793.28400046 167819234.6851452 131332000.8140302 1.3157593219805406 1.2654490975109853 1.3628313160640682 1.1755334312286698 1.3082909682630413 1.103102943837993 1.0775474318232217 1.058757899233542 1.2778243965290832 1.0 26.968643250277086 -6.266081682111425 24.71184115780916 1.1055001988235638 1.282633683386453 0.5651714289376661 0.07984416631288502 258.434416194112 1375690.1445848607 0.026694204936886044 0.02433159180900705 5.418989604533754e-07 6.266081682111425 0.17713348456288913 IESDVQEPT(ph)EPEDDLDIMLGNKK ddPTM_KYSE-520_SHP099_60min_R1 9 IESDVQEPTEPEDDLDIMLGNKK 23 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 IESDVQEPT(1)EPEDDLDIMLGNKK;IESDVQEPT(1)EPEDDLDIMLGNKK;IESDVQEPT(1)EPEDDLDIMLGNKK;IESDVQEPT(1)EPEDDLDIMLGNKK;IESDVQEPT(1)EPEDDLDIMLGNKK;IESDVQEPT(1)EPEDDLDIMLGNKK;IESDVQEPT(1)EPEDDLDIMLGNKK;IESDVQEPT(1)EPEDDLDIMLGNKK;IESDVQEPT(1)EPEDDLDIMLGNKK 209.89 1.7033e-20 2795707000.0 3649270.0 3865790.0 2821574.0 2122918.0 2397878.0 3093548.0 2104158.0 2829350.0 4023140.0 3070272.0 True False 3446837.7184606083 3680071.6457309066 3003457.1747180214 2324679.488441428 2586577.356540482 3074240.019438631 2316866.8252431243 2819535.6452252544 3292639.191106203 3043071.778715474 1.1326836726524965 1.209327913810932 0.98698203431331 0.7639252891440865 0.8499889403306533 1.0102423613340838 0.761357928343415 0.9265426024276767 1.0820116745639419 1.0 21.53709693327052 -4.897847271104195 4.557182717337811 0.9034251196072725 1.168417715410431 0.5062258352966853 0.09970647942289677 0.15696431033660302 5.581342253094868 0.02662116468488229 0.05882780117881841 1.2651811971355894e-05 4.897847271104195 0.2649925958031585 IESFGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 IESFGSPK 8 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 IESFGS(1)PK;IESFGS(1)PK;IESFGS(1)PK 163.86 0.00019103 1016950000.0 1986390.0 1798270.0 1536330.0 1549590.0 1748510.0 1619030.0 1603420.0 1699670.0 2048770.0 1713120.0 True False 1876200.9869297086 1711878.4099416987 1635364.2900149145 1696862.567698776 1886107.7893389917 1608925.0332213144 1765509.3414711857 1693774.2414759586 1676765.013288791 1697943.0895871941 1.1049846125207017 1.0082071775196497 0.9631443480314208 0.9993636289136871 1.110819202896573 0.9475730035289216 1.0397930014841772 0.9975447657010407 0.9875272166492035 1.0 20.695356673829806 IESGAFR ddPTM_KYSE-520_SHP099_60min_R1 2 IESGAFR 7 0 O94933 O94933 SLITRK3 SLIT and NTRK-like protein 3 0 ; 100.74 0.049375 250510000.0 1614000.0 1593570.0 1290730.0 1094340.0 1655190.0 1646020.0 1439000.0 1562010.0 1585750.0 1468890.0 False True 1524468.2025707664 1517012.5052026636 1373932.5210410203 1198345.7445746826 1785444.0362571555 1635746.5786198834 1584468.1632866224 1556591.7518858754 1297817.7735044446 1455876.777379129 1.0471134825813457 1.0419923779082396 0.9437148406985205 0.8231093202351547 1.2263702972660322 1.1235474073324778 1.088325734640114 1.069178227217865 0.891433803787143 1.0 20.47345682308399 -4.546431573816497 24.968278252045973 1.0271092553320118 1.0458335164088826 0.0048314048425434075 0.11056107625703739 2509.9807100189582 2660815.628055895 0.03005072026049196 0.07950996232139687 2.8416358696499607e-05 4.546431573816497 0.018724261076870752 IESYLNDHSEATPDSNGS(ph)ALGDRFEGYDNPENLK ddPTM_KYSE-520_SHP099_60min_R1 2 IESYLNDHSEATPDSNGSALGDRFEGYDNPENLK 34 1 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 IESYLNDHSEATPDS(0.151)NGS(0.849)ALGDRFEGYDNPENLK;IESYLNDHSEATPDS(0.395)NGS(0.605)ALGDRFEGYDNPENLK 267.87 8.543200000000001e-42 440190000.0 139989.0 156913.0 161378.0 205729.0 161575.0 130733.0 147552.0 181637.0 185486.0 189322.0 True False 132223.53110884718 149374.66394878528 171780.68409392945 225281.42230532065 174290.0332640061 129917.04685405594 162467.99612874753 181006.94364139446 151806.41812154817 187644.75437028724 0.7046481611093959 0.7960503050035601 0.9154568944407977 1.2005740478135798 0.9288297658461174 0.6923564012755997 0.8658275403113196 0.9646256525999437 0.8090096556708546 1.0 17.51764443452713 -4.598297980183787 3.2952842096597093 0.9205805148467756 0.7185876079907256 0.24792090098039044 0.12435486855017759 0.3695300313997331 7.706571620621416 0.035330127379509677 0.12543032961402537 2.5217499437690175e-05 4.598297980183787 -0.20199290685604998 IET(ph)DEEESCDNAHGDANQPAR ddPTM_KYSE-520_SHP099_60min_R1 4 IETDEEESCDNAHGDANQPAR 21 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IET(1)DEEESCDNAHGDANQPAR;IET(1)DEEESCDNAHGDANQPAR;IET(1)DEEESCDNAHGDANQPAR;IET(1)DEEESCDNAHGDANQPAR 268.68 1.5477e-35 3104120000.0 1157828.0 1171920.0 1102374.0 1176019.0 1172669.0 1184885.0 1097625.0 1142470.0 1415909.0 1203570.0 True False 1093600.9727671042 1115619.2041122187 1173434.7919007642 1287787.492176994 1264951.378726094 1177489.6932042248 1208583.646787684 1138507.0382245025 1158815.617761252 1192907.3061632907 0.9167526823893951 0.9352103037245607 0.9836764230029278 1.0795369309279053 1.0603936887556806 0.9870755985151494 1.0131412898080174 0.9543969027117839 0.9714213432796495 1.0 20.18605051333464 -4.811356329027377 3.5381078483638406 1.0101336474533942 0.9229047013747537 0.45795208159457956 0.035793457007404016 0.21686012544276312 5.4799156254930645 0.010770230903004543 0.027423142110216316 1.5439871123886956e-05 4.811356329027377 -0.08722894607864051 IETDEEESCDNAHGDANQPARDS(ph)QPR ddPTM_KYSE-520_SHP099_60min_R1 1 IETDEEESCDNAHGDANQPARDSQPR 26 1 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 IETDEEESCDNAHGDANQPARDS(1)QPR 179.41 5.2654e-11 41190000.0 32147.0 31289.0 29669.0 34079.0 34182.0 29817.0 27459.0 27770.0 40874.0 23559.0 True False 30363.741826544272 29785.829474253525 31581.51121207843 37317.85791377503 36871.928931024326 29630.90104294543 30234.823694014834 27673.672351566718 33452.31194968983 23350.285588624654 1.3003584778995723 1.2756087869333819 1.3525107045141969 1.5981756528046418 1.5790782854059346 1.268973817492855 1.2948374262601763 1.1851534854480859 1.4326296705333013 1.0 14.511152574656673 -6.484376006524704 22.820117091221416 1.2490589592339285 1.4195772794681412 0.29956922823958665 0.1409553381982082 290.37963994305846 172104.39934357235 0.051873145085681444 0.04573155716511281 3.278113553999906e-07 6.484376006524704 0.17051832023421265 IETIAASS(ph)TPTPIRK ddPTM_KYSE-520_SHP099_60min_R1 1 IETIAASSTPTPIRK 15 1 E7ESL9;H7C5G0;H7C4U6;Q96P47-3;Q96P47-6;Q96P47-5;Q96P47;Q96P47-2;Q96P47-4 E7ESL9;Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 IET(0.001)IAAS(0.092)S(0.498)T(0.407)PT(0.002)PIRK 78.95 0.006810200000000001 621250000.0 337830.0 360680.0 311720.0 319640.0 297190.0 338790.0 299210.0 297100.0 388370.0 339290.0 True False 319089.8964525912 343352.3914082826 331813.9699696343 350018.4894967301 320577.162220207 336675.48594223073 329457.06680819305 296069.4294436615 317851.7980109857 336284.1545636257 0.948869853432891 1.021018643753313 0.9867071209471882 1.040841457281645 0.9532924994226961 1.0011636925894198 0.9796984554199656 0.8804144513673317 0.9451881502518058 1.0 18.35932127628363 -7.022162574820309 23.927220393951224 0.9336920520892932 0.9932667419403568 0.25548876515558294 0.03751711981612209 488.5554112026864 527452.662707828 0.01645044441809081 0.009611958629320686 9.502490086134054e-08 7.022162574820309 0.05957468985106362 IETIEVMEDR ddPTM_KYSE-520_SHP099_60min_R1 1 IETIEVMEDR 10 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 174.92 0.00023159 255160000.0 118460.0 147370.0 149620.0 65305.0 127080.0 142960.0 105880.0 104440.0 139030.0 143700.0 False True 111888.78765584446 140290.12399312024 159264.74460046424 71511.56756533576 137080.4730137081 142067.73361168068 116583.38368922 104077.72201647925 113785.65666108954 142426.92979690828 0.7855873030148914 0.9849971785052518 1.1182207243220479 0.5020930217853231 0.9624617564190713 0.9974780318178607 0.8185487383282113 0.7307446854670493 0.7989054936685122 1.0 17.119862428404325 -6.952072589135909 24.996946396631266 0.8138235688328045 0.8931797973632725 0.017647182247079174 0.167649421738376 423.585038331342 220923.28495339374 0.07078097053624202 0.047720500707825686 1.1166765878837997e-07 6.952072589135909 0.07935622853046798 IETSIGQSTVIIDLTEDS(ph)NEQPDSLVDHNK ddPTM_KYSE-520_SHP099_60min_R1 3 IETSIGQSTVIIDLTEDSNEQPDSLVDHNK 30 0 Q13111;Q13111-2;Q13111-3;K7EJF1 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 IETSIGQSTVIIDLTEDS(0.955)NEQPDS(0.044)LVDHNK;IETSIGQSTVIIDLT(0.006)EDS(0.987)NEQPDS(0.006)LVDHNK;IETSIGQSTVIIDLT(0.012)EDS(0.867)NEQPDS(0.122)LVDHNK 130.26 4.2252e-05 697290000.0 179295.0 193440.0 187735.0 234526.0 179805.0 151935.0 164368.0 212086.0 233800.0 177382.0 True False 169349.14893427858 184146.8520406406 199836.69848662047 256815.28052718713 193954.63054949496 150986.71730757348 180983.92151709198 211350.3231672443 191347.81361837572 175810.53348110782 0.9632480237737089 1.0474164908920465 1.136659416985925 1.4607502488170534 1.1032025596483208 0.8588035899669125 1.0294259276366968 1.2021482386887559 1.0883751378806747 1.0 17.423661984882322 -6.001473443261524 24.991921641444172 1.0405466002984196 1.160765671578916 0.1267361299865396 0.14339943952005396 131.92050012952558 2237647.39022079 0.04893724381334761 0.05474085453411248 9.966130203107327e-07 6.001473443261524 0.12021907128049647 IETWHKPDLGTLENVHGLDPNTWK ddPTM_KYSE-520_SHP099_60min_R1 2 IETWHKPDLGTLENVHGLDPNTWK 24 1 B3KYB6;B3KYB7;A0A0A0MSW4;P48739;P48739-2;P48739-3 B3KYB6 PITPNB Phosphatidylinositol transfer protein beta isoform 0 ; 149.32 2.4425e-06 1363650000.0 1312920.0 1214630.0 762530.0 655380.0 1247580.0 1096770.0 818240.0 806210.0 809050.0 642320.0 False True 1240089.7103588672 1156277.3516032018 811683.9038911385 717667.1181528188 1345757.448240808 1089924.6516038254 900955.6844528472 803413.4456808283 662146.9144907902 636629.5445173989 1.9478984615753658 1.8162483371388698 1.2749705238804785 1.1272915690660428 2.113878408299395 1.712023359566276 1.4151961564017932 1.2619795179154951 1.0400819757630553 1.0 19.280094585133057 -7.311601494713455 1.7140940470751052 1.023079803197736 1.6459030903644072 0.4620861074248257 0.27724201095311674 0.4016794544602299 2.1334553329893753 0.23872430479976878 0.08992061366386217 4.879760478140316e-08 7.311601494713455 0.6228232871666712 IEVDEGFCS(ph)PKPSEIK ddPTM_KYSE-520_SHP099_60min_R1 5 IEVDEGFCSPKPSEIK 16 1 Q9UHV7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 IEVDEGFCS(0.999)PKPS(0.001)EIK;IEVDEGFCS(0.968)PKPS(0.032)EIK;IEVDEGFCS(1)PKPSEIK;IEVDEGFCS(0.991)PKPS(0.009)EIK;IEVDEGFCS(0.996)PKPS(0.004)EIK 188.19 2.7255e-12 12801030000.0 18836900.0 17027500.0 14548610.0 15330490.0 16832900.0 19368100.0 17483800.0 19272700.0 20843500.0 19416700.0 True False 17791979.606570806 16209473.341201449 15486436.679199051 16787495.16032011 18157553.463900264 19247216.503668096 19251233.129444502 19205847.501982015 17058845.82187599 19244683.143964 0.9245140319263283 0.842283202063811 0.8047124789402571 0.8723186053382971 0.9435101283855272 1.0001316394603716 1.000340352991603 0.9979820066824968 0.886418638034392 1.0 24.19795658215712 -5.817671087207095 3.081391979450677 0.9778084688460371 0.8534174352178201 0.6267554725246981 0.04238903766919439 0.16113887160618642 3.111947140551816 0.013951127494134583 0.016797436802735547 1.5216995521254446e-06 5.817671087207095 -0.12439103362821702 IEVEKPFAIAK ddPTM_KYSE-520_SHP099_60min_R1 1 IEVEKPFAIAK 11 1 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 147.71 0.00019483 0.0 2929000.0 2394300.0 1734300.0 1791700.0 2754600.0 2551900.0 1965400.0 2360900.0 2152100.0 2155300.0 False True 2766522.531183257 2279274.2340824325 1846095.752978111 1961982.629305752 2971371.3484699456 2535972.6455207607 2164081.8124555442 2352710.588938201 1761332.8900261156 2136205.718798027 1.2950637229544955 1.066973191778976 0.864193807147398 0.9184427380007649 1.3909574917446803 1.1871387775085958 1.0130493488582186 1.1013501968630597 0.824514640386395 1.0 21.02661915604941 -7.744008765098884 24.499367154819534 0.912257377563029 1.0984088190612669 0.1950889480585971 0.15590253740145787 296.88762514732196 417290.8218662532 0.11264205528191502 0.0423409029120061 1.8029813520267148e-08 7.744008765098884 0.1861514414982378 IEVEKPFAIAKE ddPTM_KYSE-520_SHP099_60min_R1 1 IEVEKPFAIAKE 12 2 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 136.99 0.0004524 430800000.0 282220.0 266700.0 211820.0 139700.0 229940.0 236620.0 148160.0 191760.0 250610.0 183900.0 False True 266564.69400837796 253887.33167513853 225474.25612398295 152977.04599766337 248034.96982036548 235143.16681026772 163137.45870225556 191094.82931712034 205105.5413639907 182270.78907203485 1.4624652439674768 1.3929128905828145 1.2370290229822496 0.8392844886253586 1.360804828262087 1.2900759798507115 0.8950279939688106 1.0484117081514261 1.1252792749085612 1.0 17.475723846358925 -1.0000000918304663 0.4301728544660026 1.0564620155076005 10.050596651590633 0.4171792572783153 0.15663699233479472 83.26359245622072 1.0483852260986488 0.10797370962036001 648.9759368867163 0.09999997885525595 1.0000000918304663 8.994134636083032 IEVIEIMTDR ddPTM_KYSE-520_SHP099_60min_R1 6 IEVIEIMTDR 10 0 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8VZ49;A0A2R8Y4L2;Q32P51;F8VYN5;H0YH80 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 0 ;;;;; 171.56 0.00031168 1611975000.0 842492.0 1070333.0 1088492.0 569710.0 901025.0 1045813.0 790656.0 829780.0 1052440.0 946414.0 False True 795757.2892938359 1018912.5960774121 1158657.9359687793 623855.0671104423 971930.5413690301 1039285.6931423643 870583.2245389499 826901.6868521076 861343.4258533914 938029.50825895 0.8483286317621483 1.0862265921341718 1.2352041441844739 0.665069767654071 1.0361406894043268 1.1079456285670086 0.9280979083001502 0.8815305697439054 0.9182476865275876 1.0 19.839273781771542 -6.960068092345805 24.99168495158827 0.9208959159726037 0.9998096641795474 0.04156636532411151 0.1478861650289035 498.2261633243374 311817.4817040684 0.06286394721798705 0.04238281376608748 1.0963062945352533e-07 6.960068092345805 0.07891374820694375 IEVKEES(ph)PQSK ddPTM_KYSE-520_SHP099_60min_R1 2 IEVKEESPQSK 11 1 P11171;P11171-2;P11171-5;P11171-7;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y570;A0A2R8Y6G5;A0A2R8YFR9;A0A3B3ITC5;A0A2R8Y6T6 P11171 EPB41 Protein 4.1 1 IEVKEES(1)PQSK;IEVKEES(1)PQSK 160.78 1.3800999999999999e-05 1161760000.0 1397550.0 1471460.0 1446860.0 1138600.0 1286380.0 1211240.0 1128070.0 1127380.0 1874280.0 1258100.0 True False 1320025.1155531444 1400768.8528935104 1540126.9106578527 1246812.2016674282 1387610.787499008 1203680.2018733355 1242106.3245022513 1123469.3819124699 1533957.9987538438 1246954.212786988 1.0585995075174737 1.1233522759129553 1.2351110368484286 0.9998861136053727 1.1128001118803292 0.9652962310324664 0.9961122162826642 0.900970837895864 1.2301638528694587 1.0 20.249977060796557 -5.288262728582493 24.898046995771516 1.0246194716899013 1.1374541000295328 0.22434834741227894 0.093175568405994 975.5988082586921 905571.1997445732 0.025648930964540656 0.03805744122598363 5.1491704873977505e-06 5.288262728582493 0.11283462833963154 IEVLDS(ph)PASK ddPTM_KYSE-520_SHP099_60min_R1 8 IEVLDSPASK 10 0 Q8N5I9 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 IEVLDS(1)PASK;IEVLDS(1)PASK;IEVLDS(0.991)PAS(0.009)K;IEVLDS(1)PASK;IEVLDS(0.978)PAS(0.022)K;IEVLDS(1)PASK;IEVLDS(0.994)PAS(0.006)K;IEVLDS(0.999)PAS(0.001)K 256.43 3.1305e-15 9233770000.0 21870300.0 19549400.0 15583700.0 13940890.0 15906100.0 18055300.0 14878300.0 16119500.0 18498200.0 18142300.0 True False 20657110.86163781 18610217.479752377 16588250.236801596 15265827.994118601 17157819.57667095 17942610.17542651 16382343.762214988 16063585.216819583 15139393.181674233 17981573.336495813 1.1487932938388468 1.0349604637754726 0.9225138382709651 0.8489706494778589 0.9541890053551123 0.9978331617406235 0.9110628672834211 0.8933359120592947 0.8419392952087776 1.0 24.1000159222972 -4.510571155223117 2.4219464200359355 0.9179098969917329 1.1529874327650733 0.6704244665845982 0.05090365154836499 0.20993175975788184 2.104731751683008 0.014166924080553688 0.0817087954082363 3.0862339527370124e-05 4.510571155223117 0.23507753577334045 IEVLPVDTGAGGYS(ph)GNSGSPK ddPTM_KYSE-520_SHP099_60min_R1 1 IEVLPVDTGAGGYSGNSGSPK 21 0 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 IEVLPVDT(0.06)GAGGY(0.011)S(0.4)GNS(0.301)GS(0.228)PK 82.586 0.0045685000000000005 89959000.0 84298.0 103300.0 77572.0 76785.0 89456.0 101170.0 78821.0 101520.0 135960.0 94847.0 True False 79621.82189610317 98337.31294353893 82572.41523958834 84082.62331374803 96495.6782649848 100538.56050289389 86788.99589882889 101167.85081494608 111273.09127268736 94006.72936984948 0.8469800239815604 1.0460667401442263 0.878367067901328 0.89443196117315 1.0264762843236794 1.069482591053097 0.923221097900088 1.0761766896167901 1.1836715522237462 1.0 16.520476413797365 -6.322749332221139 0.7843957747524655 1.0781753470294773 0.9200163547247874 0.36279607965074845 0.08067248919603345 0.7682680895591653 1.020441907489779 0.05758554972777298 0.052147175165698764 4.756096609701156e-07 6.322749332221139 -0.15815899230468988 IEVLPVDTGAGGYSGNSGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 IEVLPVDTGAGGYSGNSGSPK 21 0 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 IEVLPVDTGAGGYSGNS(0.096)GS(0.904)PK;IEVLPVDTGAGGYSGNS(0.02)GS(0.98)PK;IEVLPVDTGAGGYSGNS(0.008)GS(0.992)PK;IEVLPVDTGAGGYSGNS(0.021)GS(0.979)PK;IEVLPVDTGAGGYSGNS(0.057)GS(0.943)PK 335.9 2.0398999999999998e-61 3145440000.0 2279880.0 2804140.0 2004550.0 1782620.0 1919830.0 2638430.0 2175530.0 2761840.0 3569600.0 2834220.0 True False 2153410.511571896 2669424.9053000505 2133766.5003934028 1952039.668835756 2070909.698661528 2621962.579694085 2395453.803526716 2752259.8216583007 2921450.622293215 2809111.0157897933 0.7665807792813255 0.9502739088257537 0.7595878156468961 0.6948958791103284 0.7372117680722146 0.9333780562449252 0.8527444412349876 0.9797618556860386 1.039991159435127 1.0 21.421682210080604 -7.023004305868771 1.2236530375274475 1.0222595350651038 0.7920347971053283 0.6091950800287556 0.073905347329674 0.35903994574293224 1.0075328872371028 0.06068071135795082 0.027655254410281303 9.484090601300804e-08 7.023004305868771 -0.2302247379597755 IEVPLYSLLEQTHLK ddPTM_KYSE-520_SHP099_60min_R1 2 IEVPLYSLLEQTHLK 15 0 Q92598-2;Q92598-3;Q92598;Q92598-4;A0A0A0MSM0 Q92598-2 HSPH1 Heat shock protein 105 kDa 0 ; 145.43 1.4293e-05 84033000.0 84691.0 102745.0 83786.0 82759.0 123266.0 85356.0 66574.0 70566.0 79954.0 39515.0 False True 79993.0214026771 97808.97597661082 89186.97962233993 90624.39047759942 132966.33291239952 84823.26154279946 73303.94961962731 70321.22301622824 65436.36907631988 39164.92784220479 2.0424656908591383 2.4973613221166264 2.2772154714971933 2.313916952502107 3.395035820010187 2.165796446365273 1.8716732969601884 1.7955151940928358 1.6707899817909162 1.0 15.25727467989023 -7.55062063649976 0.8787456521336403 1.0877774004870968 2.4758263052890834 0.614854534314883 0.36498485708528294 0.39366400611950364 0.5941518238336871 0.35933495315057057 0.13890401201799968 2.8143581459437423e-08 7.55062063649976 1.3880489048019866 IEWLESHQDADIEDFK ddPTM_KYSE-520_SHP099_60min_R1 12 IEWLESHQDADIEDFK 16 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ;;;;;;;;;;; 276.12 1.2444000000000001e-29 19880731000.0 26548986.0 23122686.0 14429069.0 16616544.0 25203316.0 24445549.0 19618074.0 21956576.0 20172561.0 19918600.0 False True 25076260.8224885 22011837.456700742 15359189.875066692 18195775.34581388 27186673.58194802 24292975.261074986 21601260.373871483 21880413.762559347 16509732.431280188 19742136.700436316 1.2701898078709128 1.1149673305734056 0.7779902504032019 0.9216720369184629 1.3770887110384142 1.2305139828425002 1.0941703373674887 1.1083103158776006 0.8362687728180562 1.0 24.234774805996796 -7.745004648188006 24.02074608513535 0.9181344625407749 1.106703757016832 0.1808165335564661 0.16464687324181349 252.77629808543605 369459.2334719869 0.12242964302238131 0.04593278659141596 1.7988516621891005e-08 7.745004648188006 0.1885692944760572 IEWLESHQDADIEDFKAK ddPTM_KYSE-520_SHP099_60min_R1 2 IEWLESHQDADIEDFKAK 18 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 231.21 1.9548e-19 747540000.0 1547310.0 1649650.0 1220240.0 777560.0 1360300.0 1103080.0 701550.0 759420.0 1329780.0 720350.0 False True 1461477.6298139875 1570398.337824867 1298898.6228530323 851459.0686180622 1467347.8709517396 1096195.26855325 772469.5204681936 756785.7492699609 1088325.4730258489 713968.2594238191 2.04697843429821 2.1995352273673863 1.8192666210417519 1.192572719276344 2.05520042604682 1.5353557445787474 1.081938181805989 1.0599711391661808 1.5243331319856437 1.0 19.445500412851253 -4.115009410295562 0.25490018703809114 0.9900049962505365 3.256725615639901 0.5911866144977213 0.2777413087710134 7.576950624300882 0.39429764499616976 0.40907787243682386 5.499381904763534 7.673448623483854e-05 4.115009410295562 2.2667206193893645 IEYQFFEDR ddPTM_KYSE-520_SHP099_60min_R1 1 IEYQFFEDR 9 0 Q9NYU2-2;Q9NYU2 Q9NYU2-2 UGGT1 UDP-glucose:glycoprotein glucosyltransferase 1 0 123.29 0.005318600000000001 76009000.0 119370.0 115340.0 99745.0 107150.0 114080.0 117210.0 103110.0 124180.0 119690.0 133510.0 False True 112748.30814180462 109798.89327113035 106174.72229764269 117333.50378417788 123057.44697359006 116478.44891315816 113533.36505662516 123749.24856382993 97957.31313936437 132327.20526920835 0.8520417846989805 0.8297529827502509 0.8023650320554969 0.8866922228537429 0.92994820470394 0.8802305518067335 0.8579744794401972 0.9351761666247896 0.7402658655117715 1.0 17.013750171518915 -11.361275762205109 2.468468470390409 2.085479854234307 0.8607494566567929 0.37547601533931196 0.055090548895595295 9649138.345584782 3302577.202367915 56760350.066383414 0.014008000535480876 4.3523542625477904e-12 11.361275762205109 -1.2247303975775141 IFDLGR ddPTM_KYSE-520_SHP099_60min_R1 1 IFDLGR 6 0 X1WI28;P27635;B8A6G2;A6QRI9;Q96L21 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like 0 109.7 0.068332 1764400000.0 2147700.0 2136300.0 1692600.0 1445400.0 2276400.0 2239600.0 1719400.0 1775000.0 2045800.0 1843600.0 False True 2028562.7996661924 2033668.9413483236 1801707.7042557513 1582770.3814246438 2455539.7290557525 2225621.825662564 1893213.7317269065 1768842.9392881142 1674334.2904211823 1827267.138299096 1.1101621416748466 1.1129565561176544 0.9860122072423759 0.8661953954351519 1.343831822719409 1.21800571958749 1.0360902858950316 0.9680264599595625 0.9163051506413723 1.0 20.801256134283637 -7.093345320507255 3.9460087927185854 0.9583166974654548 1.1024816086789466 0.22216504111270907 0.12059849023491623 0.4077701353444814 11.404274320086081 0.06564584640149097 0.03678058573058142 8.065934286905365e-08 7.093345320507255 0.14416491121349184 IFDLGS(ph)DNEEVVAGPAPAHAK ddPTM_KYSE-520_SHP099_60min_R1 3 IFDLGSDNEEVVAGPAPAHAK 21 0 A0A096LNM2;Q969U6-2;Q969U6 A0A096LNM2 FBXW5 F-box/WD repeat-containing protein 5 1 IFDLGS(1)DNEEVVAGPAPAHAK;IFDLGS(1)DNEEVVAGPAPAHAK;IFDLGS(1)DNEEVVAGPAPAHAK 138.95 1.2251000000000001e-06 2274975000.0 1658140.0 1553450.0 1459390.0 1351180.0 1476450.0 1588080.0 1336060.0 1684280.0 2117690.0 1653490.0 True False 1566159.6687798603 1478819.930224011 1553464.6145065613 1479595.7409529197 1592638.215148643 1578168.2036516343 1471121.9834890363 1678437.6257939085 1733170.8786206064 1638841.3649957534 0.9556505603481144 0.9023569710957613 0.9479042009112253 0.9028303608609206 0.9718074300332111 0.9629780144435905 0.8976597826433605 1.0241611309330465 1.0575586604290388 1.0 20.644244781900557 -7.318733538628656 8.042371006717113 1.0312589998287331 0.9350967589939974 0.6943296585244201 0.028176417321196887 0.18182271811745865 23.405820541338866 0.014995468051699514 0.007179273728337572 4.800278793999905e-08 7.318733538628656 -0.09616224083473579 IFEERMAVFLS(ph)QLK ddPTM_KYSE-520_SHP099_60min_R1 1 IFEERMAVFLSQLK 14 1 Q14993 Q14993 COL19A1 Collagen alpha-1(XIX) chain 1 IFEERMAVFLS(1)QLK 45.115 0.06629299999999999 0.0 604500.0 547140.0 494880.0 406570.0 457450.0 555190.0 439200.0 542990.0 672250.0 602740.0 True False 570967.1799591257 520854.5731261161 526780.7566359963 445210.2905602725 493448.71246553963 551724.8532727262 483598.6221789332 541106.4944248188 550186.3460434263 597400.1925246248 0.9557532573704193 0.8718687734682083 0.8817887292767862 0.7452463124908032 0.8259935611674577 0.923543146079559 0.8095053001828407 0.90576886515234 0.9209678083937807 1.0 19.188338177024043 -7.964582986251386 1.4237217976807355 0.9985044023193368 0.8571107567060469 0.3690525591953193 0.05635070707658108 0.45877186137003606 2.098751121214713 0.05533195788844732 0.01664452706787475 1.0849682109459951e-08 7.964582986251386 -0.14139364561328993 IFFALASS(ph)LSSAS(ph)AEK ddPTM_KYSE-520_SHP099_60min_R1 1 IFFALASSLSSASAEK 16 0 Q9NZH6-3 Q9NZH6-3 2 IFFALAS(0.438)S(0.48)LS(0.082)S(0.1)AS(0.9)AEK 57.745 0.042616 102800000.0 147410.0 141230.0 147890.0 129510.0 154370.0 165510.0 125730.0 123340.0 153240.0 139630.0 True False 139232.8734454503 134445.0988094481 157423.22603236642 141818.59146139878 166518.04075484845 164476.9906971827 138440.01540655107 122912.16232777254 125415.47886603881 138392.9868304961 1.0060688524338512 0.9714733519995244 1.1375086963415175 1.0247527328469206 1.2032260056559074 1.1884777868016845 1.0003398190698245 0.8881386632569431 0.9062271270989175 1.0 17.07841130959913 -6.992323401150162 10.015791857969377 0.9270633628610492 1.0884009194927369 0.46799136105415784 0.07575175245475468 0.1556578781881672 172.00947642987677 0.03492405211459827 0.022937365479717572 1.0178331674912375e-07 6.992323401150162 0.1613375566316877 IFGPIWNR ddPTM_KYSE-520_SHP099_60min_R1 3 IFGPIWNR 8 0 P11413;P11413-3;P11413-2;E7EM57;E7EUI8;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;; 137.83 0.0039667 1211996000.0 746870.0 718243.0 563410.0 453339.0 731622.0 706079.0 513090.0 563961.0 542354.0 459734.0 False True 705439.6322515666 683737.528175278 599728.3100878724 496424.20225865935 789196.4890402517 701672.0990542931 564958.1444758391 562004.750920487 443876.18523173797 455661.11442763987 1.548167289055762 1.5005395600502953 1.316171802022643 1.089459219890252 1.7319812115887236 1.539899010113404 1.2398647297026613 1.2333831725501228 0.9741366361474468 1.0 18.79760173238859 -7.38800198939277 1.5934768480629462 0.9883638052205734 1.4399940219373335 0.5343089104908085 0.16600783253114415 0.348024380778904 1.565656045821221 0.1492114526564841 0.052796862517877796 4.092587850151185e-08 7.38800198939277 0.45163021671676007 IFHELTQTDK ddPTM_KYSE-520_SHP099_60min_R1 4 IFHELTQTDK 10 0 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586;A0A494C1T2 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 0 ;;; 177.57 3.7757e-05 602690000.0 1848640.0 1807210.0 1203619.0 1048745.0 1705330.0 1754040.0 1223478.0 1474370.0 1418251.0 1441560.0 False True 1746092.254027523 1720388.9189224853 1281206.2065984898 1148417.4094833175 1839529.7689995822 1743092.3857318964 1347159.0962346008 1469255.7545905458 1160732.369598266 1428788.899916709 1.2220785408742407 1.2040889448558671 0.8967078388369182 0.8037698288041462 1.2874748460789536 1.2199789526874891 0.9428678346487247 1.0283224867411804 0.8123889887903879 1.0 20.446361346821114 -6.801382176024687 24.668173770774903 0.9482547508376853 1.0951972414898963 0.20681213596164127 0.15244748666592428 270.95641385932345 167336.69880338098 0.06949471944804288 0.046854119614007476 1.5798571644230814e-07 6.801382176024687 0.146942490652211 IFHLWR ddPTM_KYSE-520_SHP099_60min_R1 2 IFHLWR 6 0 E9PDF6;O43795-2;O43795 E9PDF6 MYO1B Unconventional myosin-Ib 0 ; 100.78 0.029387 163716000.0 245880.0 228660.0 213623.0 163836.0 340730.0 294100.0 200134.0 171018.0 157815.0 139442.0 False True 232240.5462503717 217674.83037434248 227393.48038888507 179406.92418091034 367543.51251149474 292264.41280914407 220365.49783961408 170424.77847390124 129159.77419240348 138206.65236423456 1.6803861628767116 1.574995317885819 1.6453150155869811 1.298106285854426 2.659376420918278 2.1146913539219545 1.5944637546017342 1.2331155958018427 0.9345409354971668 1.0 17.07646753373687 -7.292786631226018 2.4855955037053565 0.9935091286494434 1.8217527141125411 0.5039871866280141 0.34631144054239854 0.2797307697013264 3.3243874080430076 0.25409242027425744 0.10703694735841625 5.0958116667108415e-08 7.292786631226018 0.8282435854630977 IFIEDT(ph)DS(ph)ETEDFAGFTQSDLNGK ddPTM_KYSE-520_SHP099_60min_R1 1 IFIEDTDSETEDFAGFTQSDLNGK 24 0 Q96GN5-2;Q96GN5;C9J8L0;C9IZR6;Q96GN5-4;C9JFL7 Q96GN5-2 CDCA7L Cell division cycle-associated 7-like protein 2 IFIEDT(0.764)DS(0.764)ET(0.472)EDFAGFTQSDLNGK 127.1 0.00012225 17718000.0 10246.0 10804.0 9344.9 10946.0 10973.0 11067.0 9864.5 9748.7 15142.0 13005.0 True False 9677.633955105384 10284.959622865379 9947.287206368661 11986.304548965094 11836.512672170436 10997.926747904796 10861.699928242455 9714.88403506368 12392.594498757233 12889.7858177369 0.750798662751133 0.7979154788369588 0.7717185798914336 0.9299071930637841 0.9182862182149595 0.8532280445475808 0.8426594577930293 0.7536885540561568 0.9614274956923248 1.0 13.653940671002617 -13.999998397413613 0.02226574522756693 2.1118324342674346 3.9004667048818804e-08 0.4319023809701774 0.06455317439731674 2996.392508666455 5.033787916768785 332.8159383587475 169.86473689038462 1.0000036900983337e-14 13.999998397413613 -2.1118323952627676 IFIEDTDS(ph)ET(ph)EDFAGFTQSDLNGK ddPTM_KYSE-520_SHP099_60min_R1 1 IFIEDTDSETEDFAGFTQSDLNGK 24 0 Q96GN5-2;Q96GN5;C9J8L0;C9IZR6;Q96GN5-4;C9JFL7 Q96GN5-2 CDCA7L Cell division cycle-associated 7-like protein 2 IFIEDT(0.608)DS(0.698)ET(0.694)EDFAGFTQSDLNGK 153.19 4.8447e-07 10668000.0 14772.0 16355.0 17433.0 14789.0 12865.0 16680.0 13322.0 15036.0 16981.0 17547.0 True False 13952.567712748065 15569.281250644506 18556.759073786223 16194.542113525007 13877.402308163006 16575.893932868163 14668.717770190682 14983.843625428777 13897.678456174652 17391.547231359433 0.8022614392576642 0.8952211694294155 1.066998745248252 0.9311731669465236 0.797939488853532 0.9531005903246762 0.8434394924760287 0.8615589760990774 0.7991053510819992 1.0 14.086098666634078 -5.592711866187287 24.999995986915955 0.8705744281350225 0.9322398062640057 0.06683969333768425 0.08437269702143857 113.2179441694846 40529.43396554087 0.025041418860663057 0.0323283280524294 2.5543954609682723e-06 5.592711866187287 0.061665378128983206 IFLAQKPAPLLES(ph)PFKDR ddPTM_KYSE-520_SHP099_60min_R1 2 IFLAQKPAPLLESPFKDR 18 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 IFLAQKPAPLLES(1)PFKDR;IFLAQKPAPLLES(1)PFKDR 191.41 1.0068e-12 5373500000.0 4423000.0 4261600.0 3829400.0 3938700.0 4428700.0 4544300.0 3873300.0 4299100.0 5003400.0 3608200.0 True False 4177647.3729680963 4056866.3392079845 4076249.251256636 4313032.863786666 4777213.494143922 4515937.338077507 4264850.963765168 4284187.425517488 4094908.6854498745 3576234.155137118 1.168169418371857 1.1343961729632432 1.1398160954872785 1.2060264168080732 1.3358223446531443 1.2627633264982223 1.1925536133138483 1.1979605472319041 1.1450337164214208 1.0 21.77000976988221 -8.195109509660442 1.7560315911827171 1.0001342007913736 1.207278583341457 0.552175563076057 0.055874731751515035 0.6312918998833386 3.583416396242931 0.06182818733119499 0.01752356036055206 6.381025649516839e-09 8.195109509660442 0.20714438255008338 IFLGADAEEEIGT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 IFLGADAEEEIGTPR 15 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 IFLGADAEEEIGT(1)PR;IFLGADAEEEIGT(1)PR;IFLGADAEEEIGT(1)PR 192.96 2.109e-07 85533000.0 152820.0 171283.0 139357.0 118316.0 123600.0 136405.0 120625.0 129130.0 153241.0 153628.0 True False 144342.7699608826 163054.3075789754 148340.1751990837 129560.71706699739 133326.6168121995 135553.64579813418 132818.95218655237 128682.07816916853 125416.29729124656 152266.97544077542 0.947958475848396 1.070844857244805 0.9742110839837423 0.8508786405716078 0.8756108566959563 0.8902366741425035 0.8722768138138568 0.8451082567094117 0.823660527361217 1.0 17.216243549983993 -5.133127462443721 4.3585521600438355 0.8734597088267908 1.0120487171946693 0.5141471228188845 0.05282471901859915 0.15565850179507723 4.7752246938826755 0.01364567772770669 0.024787856941212223 7.359910574793246e-06 5.133127462443721 0.13858900836787846 IFMVGES(ph)PQVSSR ddPTM_KYSE-520_SHP099_60min_R1 1 IFMVGESPQVSSR 13 0 Q8NG08 Q8NG08 HELB DNA helicase B 1 IFMVGES(0.997)PQVS(0.003)SR 156.2 2.6387000000000002e-06 156570000.0 193560.0 174440.0 163100.0 175890.0 155910.0 185080.0 167800.0 180550.0 177680.0 193500.0 True False 182822.84094770628 166059.640560222 173613.6869692268 192606.5327167433 168179.2299934471 183924.84706806007 184762.86157018424 179923.71419068667 145417.79094830193 191785.74054072195 0.9532660792833418 0.8658602046848342 0.9052481507735626 1.004279735155008 0.8769120661383975 0.9590121066847889 0.9633816416656559 0.9381495917444571 0.7582304635282585 1.0 17.54913593297876 -9.94735243533547 4.1980131695794345 1.0000030022436799 0.9172312830886145 0.13304045730624314 0.06548167011204788 10926641.33375096 3699006.4867222956 304.8280041505658 0.015486182038460056 1.1288794432496389e-10 9.94735243533547 -0.08277171915506543 IFPGLS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 5 IFPGLSPVR 9 0 Q5VZK9-2;Q5VZK9;A0A0U1RR91;Q5VZK9-3 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 IFPGLS(1)PVR;IFPGLS(1)PVR;IFPGLS(1)PVR;IFPGLS(1)PVR;IFPGLS(1)PVR 115.7 0.00084479 856865000.0 3748360.0 3870590.0 3414230.0 2737050.0 2922452.0 3488600.0 3064330.0 3225020.0 3981370.0 3334320.0 True False 3540430.9986295938 3684641.0465259664 3634316.728761145 2997178.409075912 3152432.3459227053 3466826.353369536 3374102.381378801 3213833.1583453245 3258453.5701701967 3304780.5188617045 1.071305939508823 1.1149427399175968 1.099715006191378 0.9069220760561302 0.953900668419737 1.0490337659590314 1.0209762379442293 0.9724800603255475 0.9859818379988924 1.0 21.65612303020563 -5.231704870440285 24.710023784321507 0.986011445157677 1.0972834196587473 0.6515645392729196 0.037218214199492505 402.2343874628456 334264.95087984967 0.010873750504344477 0.01883016594871939 5.865366164779676e-06 5.231704870440285 0.11127197450107029 IFPKPNLDITEEIKEDS(ph)DEMPSECISR ddPTM_KYSE-520_SHP099_60min_R1 1 IFPKPNLDITEEIKEDSDEMPSECISR 27 2 Q96LT9-2;Q96LT9;H0YEB8 Q96LT9-2 RNPC3 RNA-binding protein 40 1 IFPKPNLDITEEIKEDS(0.999)DEMPSECISR 104.98 0.0010918 560880000.0 152390.0 144500.0 157110.0 155490.0 170730.0 178370.0 152920.0 158640.0 196950.0 170870.0 True False 143936.62291806657 137558.00310107818 167237.5619848881 170267.7228502267 184165.47967918174 177256.72666700813 168378.64595537912 158089.71486685416 161188.84470547072 169356.22473484822 0.8499045319616699 0.8122406089085017 0.9874899032894883 1.0053821352997538 1.0874444087751693 1.046650201045337 0.9942276773056341 0.9334744861865372 0.9517739602298958 1.0 17.369701488898382 -4.794260312396826 6.40276163251441 1.0037575792004212 0.8306700871732553 0.7248722678609052 0.04182805920234092 0.08969403311071442 10.893252094861996 0.01262806285777925 0.027844285663655724 1.605978354779392e-05 4.794260312396826 -0.1730874920271659 IFQGSFGGPTLYENPHYQS(ph)PNMHR ddPTM_KYSE-520_SHP099_60min_R1 1 IFQGSFGGPTLYENPHYQSPNMHR 24 0 Q8TDN6 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog 1 IFQGSFGGPTLYENPHYQS(1)PNMHR 162.0 2.1919999999999998e-10 720420000.0 629240.0 720050.0 533010.0 778690.0 783390.0 559520.0 510230.0 574960.0 662210.0 522870.0 True False 594334.8028411587 685457.7171829148 567368.6774461537 852696.4634783143 845038.3361206239 556027.8281365945 561809.0277649298 572965.5979566725 541969.3569556226 518237.7785867047 1.1468380488623957 1.32267029827937 1.0948037771260806 1.6453768881993085 1.6305996417805408 1.0729202908613642 1.0840757871744684 1.1056036854727516 1.045792837476335 1.0 18.98325466361954 -6.365468709655955 12.642081598993101 1.0693012217793953 1.3657323916836286 0.45703775475357544 0.16686003126193988 0.8729038760066478 102.61419272576332 0.06351570988470401 0.05600716690144624 4.3105361372999186e-07 6.365468709655955 0.29643116990423324 IFRLS(ph)DVLKPLTDAQVEAMK ddPTM_KYSE-520_SHP099_60min_R1 1 IFRLSDVLKPLTDAQVEAMK 20 2 Q92797;M0R3C7;A0A087WUE9;Q92797-2 Q92797 SYMPK Symplekin 1 IFRLS(1)DVLKPLTDAQVEAMK 124.28 2.7504e-05 23215000.0 44386.0 54096.0 43892.0 44864.0 61153.0 55541.0 34960.0 42144.0 52484.0 33173.0 True False 41923.82009870265 51497.14696024859 46721.34854968303 49127.86107114656 65965.39318702622 55194.34801711213 38494.097976720164 41997.81230048354 42954.22861397271 32879.11302820349 1.2750897526566691 1.5662571832784746 1.4210039215354067 1.4941966661024282 2.0063008734585246 1.6787055043050212 1.1707766551883616 1.2773401844647725 1.3064290565602197 1.0 15.00488375986247 -6.766667421210865 24.998701580268282 1.2117480837303851 1.5823827537332533 0.48341970771856335 0.19423604244682013 129.52420576856144 619331.8007369102 0.08515438411611027 0.05934214119672644 1.7113253308987626e-07 6.766667421210865 0.3706346700028682 IFSLS(ph)GTLETVR ddPTM_KYSE-520_SHP099_60min_R1 3 IFSLSGTLETVR 12 0 B4DEM9;Q9Y2S7 B4DEM9 POLDIP2 Polymerase delta-interacting protein 2 1 IFS(0.004)LS(0.889)GT(0.107)LETVR;IFS(0.016)LS(0.851)GT(0.133)LETVR;IFSLS(0.582)GT(0.418)LETVR 226.53 3.4479999999999994e-11 190152000.0 188730.0 240089.0 182240.0 178081.0 155282.0 222699.0 165925.0 182674.0 229443.0 195734.0 True False 178260.77067607228 228554.7640590639 193987.4819943097 195005.76469799504 167501.80996627803 221309.05293500057 182698.31827194753 182040.34653043194 187781.9349873435 193999.94903874776 0.9188701933136494 1.1781176499866732 0.9999357368674588 1.0051846181621749 0.863411618385646 1.1407686137628745 0.9417441560021084 0.9383525481961487 0.967948372758787 1.0 17.565696747872124 -4.981846586831913 24.998035684401184 0.9792933268589756 1.058627120349643 0.08480538076507504 0.08810604111989168 492.1238675546584 677667.658934 0.021965667869371437 0.04571367208049681 1.042685689806446e-05 4.981846586831913 0.07933379349066727 IFSLSGT(ph)LETVR ddPTM_KYSE-520_SHP099_60min_R1 2 IFSLSGTLETVR 12 0 B4DEM9;Q9Y2S7 B4DEM9 POLDIP2 Polymerase delta-interacting protein 2 1 IFS(0.001)LS(0.261)GT(0.738)LETVR;IFSLS(0.301)GT(0.699)LETVR 164.92 1.4415e-05 176739000.0 209251.0 269199.0 203724.0 181046.0 191572.0 231236.0 183367.0 218944.0 273739.0 240423.0 True False 197643.4298984733 256266.2759640631 216856.37500992493 198252.5574065352 206647.62650442295 229792.770351361 201903.5258494633 218184.534365914 224034.89799863313 238293.03926626383 0.8294133580529414 1.0754249337418385 0.910040745116411 0.8319695699756122 0.8671995923201058 0.9643285051838849 0.8472909090049432 0.9156143840278902 0.9401655150669385 1.0 17.862377284283454 -9.718995177419702 7.561211722213985 0.999999772286364 0.910476799318826 0.1301914528541983 0.07043858174773708 0.0 0.0 0.06792978691196656 0.016475393327278726 1.9098744664613866e-10 9.718995177419702 -0.08952297296753808 IFTSIGEDYDER ddPTM_KYSE-520_SHP099_60min_R1 4 IFTSIGEDYDER 12 0 P35232;D6RBK0;C9JZ20;E7ESE2;E9PCW0;C9JW96;P35232-2 P35232 PHB Prohibitin 0 ;;; 223.87 3.8044999999999996e-10 1043340000.0 724770.0 899470.0 1051170.0 437340.0 694440.0 873810.0 622800.0 652720.0 905460.0 837390.0 False True 684565.5633068243 856258.1110680047 1118930.1001314654 478904.6621089349 749088.4771768918 868356.2276666375 685758.701942257 650455.8666659925 741051.2887891115 829971.376079562 0.824806231921426 1.03167185730261 1.3481550477280597 0.5770134680681163 0.9025473633985701 1.0462484040936322 0.8262437979264955 0.7837087945592465 0.8928636699370625 1.0 19.662702056317872 -5.261510553968042 24.999999999843144 0.8601927112628259 1.064557106362552 0.2409840480321388 0.16828745945675316 9.622050799358703 3380196.334719712 0.047037338614166195 0.07514303387331471 5.476327925514493e-06 5.261510553968042 0.20436439509972615 IFTTPLT(ph)PSQYYSGSK ddPTM_KYSE-520_SHP099_60min_R1 2 IFTTPLTPSQYYSGSK 16 0 P49454 P49454 CENPF Centromere protein F 1 IFTTPLT(0.919)PS(0.081)QYYSGSK;IFTTPLT(0.984)PS(0.016)QYYSGSK 205.95 1.7901e-12 788010000.0 1341730.0 1780100.0 1254880.0 1093340.0 1062400.0 1795580.0 1115870.0 1491010.0 1598140.0 1605440.0 True False 1267301.562227555 1694581.3240154271 1335771.5726789902 1197250.7048753432 1146004.8357708817 1784373.1191834179 1228673.0294417266 1485838.03431435 1307958.0618309265 1591217.0506134208 0.7964353836825749 1.064959254529204 0.8394653464554347 0.7524119380280636 0.7202064830370515 1.1213888881441627 0.7721592908824526 0.9337745807472043 0.8219859517761597 1.0 20.601699209823924 IFVGGLS(ph)PDTPEEK ddPTM_KYSE-520_SHP099_60min_R1 10 IFVGGLSPDTPEEK 14 0 Q14103-3;Q14103;H0YA96;H0Y8G5;Q14103-4;Q14103-2;D6RAF8;D6RF44 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 IFVGGLS(0.995)PDT(0.005)PEEK;IFVGGLS(0.987)PDT(0.013)PEEK;IFVGGLS(0.971)PDT(0.029)PEEK;IFVGGLS(0.886)PDT(0.114)PEEK;IFVGGLS(0.98)PDT(0.02)PEEK;IFVGGLS(0.63)PDT(0.37)PEEK;IFVGGLS(0.872)PDT(0.128)PEEK;IFVGGLS(0.92)PDT(0.08)PEEK;IFVGGLS(0.5)PDT(0.5)PEEK;IFVGGLS(0.989)PDT(0.011)PEEK 299.27 3.7356e-33 5179115000.0 6218710.0 6397070.0 4918410.0 4244430.0 4854720.0 6081240.0 4726300.0 5709310.0 6712430.0 5973940.0 True False 5873745.7596089635 6089745.155002176 5235458.578334245 4647819.351065591 5236758.844421698 6043284.725438562 5204080.5282429205 5689505.736172977 5493621.918590211 5921015.539254987 0.992016609425759 1.0284967358434631 0.884216321275353 0.7849699633874637 0.8844359231458147 1.020650036361661 0.8789168840617035 0.960900321651387 0.927817514101888 1.0 22.497413209333097 -8.664618700029534 0.7737577860153535 1.0008603193532348 0.9240544883271034 0.08182444556081558 0.07109571759884065 7.277806115647486 6.111604007151906 0.09434036841904786 0.02717704736229903 2.164618171681254e-09 8.664618700029534 -0.07680583102613148 IFVNDDR ddPTM_KYSE-520_SHP099_60min_R1 6 IFVNDDR 7 0 Q12906;Q12906-5;Q12906-2;Q12906-3;K7EKJ9;K7ERM6;K7ENK6;K7EM82;K7EJ09;K7ER69;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 0 ;;;;; 143.23 0.011848000000000001 1463940000.0 3226310.0 3612540.0 2873840.0 2075920.0 3400050.0 3459790.0 2666510.0 3052190.0 3173340.0 3163120.0 False True 3047340.152810467 3438988.155866913 3059092.324706575 2273214.812651891 3667614.59136181 3438196.1672660634 2936066.8534297533 3041602.6652765037 2597141.449391513 3135097.2176701203 0.9720081838722465 1.096931902616606 0.975756766796524 0.7250859079710624 1.1698567338487307 1.0966792825076073 0.9365154091175908 0.9701781010596227 0.8284085848290235 1.0 21.580078750238545 -6.958558041329275 24.984891059037093 0.9302450257935414 1.004574311037093 0.08142860160433374 0.11881387476452206 414.1837273216392 249705.83074032166 0.0518642505833641 0.03496682925376548 1.1001248091809675e-07 6.958558041329275 0.07432928524355165 IFYPEIEEVQALDDT(ph)ERGSGGFGSTGKN ddPTM_KYSE-520_SHP099_60min_R1 2 IFYPEIEEVQALDDTERGSGGFGSTGKN 28 2 P33316-2;A0A0C4DGL3;H0YNW5;P33316 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 IFYPEIEEVQALDDT(0.494)ERGS(0.494)GGFGS(0.006)T(0.006)GKN;IFYPEIEEVQALDDT(0.488)ERGS(0.488)GGFGS(0.012)T(0.012)GKN 81.179 0.025473 287055000.0 84038.0 88678.0 78108.0 72447.0 62343.0 81523.0 62018.0 63494.0 95478.0 69103.0 True False 79376.2446144003 84417.77577160836 83142.96665721865 79332.34109801527 67249.03941685235 81014.18471757861 68287.38467735217 63273.754133610986 78141.60200451354 68490.8011813205 1.1589329259598236 1.232541805842266 1.2139289543001324 1.1582919126320805 0.981869656318069 1.18284767180784 0.9970300171634756 0.9238285002113196 1.1409065255003195 1.0 16.063622616071466 -5.608876912221575 5.102523891464955 1.0396278354534576 1.2022637447737707 0.5156614860969365 0.07350028843532437 0.16824100089843064 7.452750289711944 0.021930700301125622 0.02861843440389292 2.4610650205662447e-06 5.608876912221575 0.16263590932031313 IFYPEIEEVQALDDTER ddPTM_KYSE-520_SHP099_60min_R1 4 IFYPEIEEVQALDDTER 17 0 P33316-2;A0A0C4DGL3;H0YNW5;P33316;H0YKC5 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 0 ;;; 149.69 4.3694e-05 128992000.0 24180.0 25357.6 81582.0 14169.8 22939.6 25404.8 21951.699999999997 21451.2 37987.399999999994 27620.3 False True 22838.68719836502 24139.38283346642 86840.90625581518 15516.493531694276 24744.816011530198 25246.23921976792 24170.792063946446 21376.790793947708 31089.845744425464 27375.60563026823 0.8342714863306293 0.8817844309817339 3.1722003680458593 0.5668000095142459 0.9039002221806826 0.9222166464822993 0.8829317747484521 0.7808700593754957 1.1356770025226595 1.0 14.740603261345257 IFYPEIEEVQALDDTERGS(ph)GGFGSTGK ddPTM_KYSE-520_SHP099_60min_R1 3 IFYPEIEEVQALDDTERGSGGFGSTGK 27 1 P33316-2;A0A0C4DGL3;H0YNW5;P33316 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 IFYPEIEEVQALDDTERGS(0.999)GGFGSTGK;IFYPEIEEVQALDDT(0.006)ERGS(0.994)GGFGSTGK;IFYPEIEEVQALDDT(0.217)ERGS(0.782)GGFGS(0.001)TGK 227.88 4.6207e-23 418167000.0 239027.0 200970.0 224793.0 213758.0 204621.0 197955.0 225086.0 252838.0 223935.0 255995.0 True False 225767.69582148857 191315.09953788004 239283.51646151705 234073.4960513139 220723.5085657692 196719.48941732105 247839.889507667 251960.9639908329 183274.04894196277 253727.083461096 0.889805269275109 0.7540192277787106 0.9430743978823468 0.9225404432917168 0.8699249033838864 0.7753192396092161 0.9767971401668215 0.9930392946382727 0.7223274963079147 1.0 17.952917998921656 -11.335611818670143 2.420957399905225 1.80717215743253 0.8757428527331408 0.15574140556874294 0.0890861346652544 4664361.08795006 1808933.3731769265 20471546.32338673 0.021944305042431972 4.617300940173207e-12 11.335611818670143 -0.9314293046993891 IFYPEIEEVQALDDTERGS(ph)GGFGSTGKN ddPTM_KYSE-520_SHP099_60min_R1 6 IFYPEIEEVQALDDTERGSGGFGSTGKN 28 2 P33316-2;A0A0C4DGL3;H0YNW5;P33316 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 IFYPEIEEVQALDDT(0.102)ERGS(0.74)GGFGS(0.079)T(0.079)GKN;IFYPEIEEVQALDDT(0.05)ERGS(0.95)GGFGSTGKN;IFYPEIEEVQALDDT(0.01)ERGS(0.983)GGFGS(0.003)T(0.004)GKN;IFYPEIEEVQALDDT(0.021)ERGS(0.979)GGFGSTGKN;IFYPEIEEVQALDDT(0.025)ERGS(0.975)GGFGSTGKN;IFYPEIEEVQALDDT(0.045)ERGS(0.901)GGFGS(0.04)T(0.014)GKN 237.07 5.6136999999999995e-31 1640937000.0 610679.0 655043.0 598653.0 486821.0 534960.0 558344.0 525727.0 505155.0 719092.0 585354.0 True False 576803.418511595 623573.7510404115 637243.1302586675 533088.3214719289 577058.3084939661 554859.1679888096 578872.6157610745 503402.73520906345 588523.0196341529 580168.2189585203 0.9942003020210834 1.0748154253602686 1.098376487086115 0.9188512987300369 0.9946396400855309 0.9563763575068903 0.9977668490704789 0.8676840936112268 1.0144006520912685 1.0 19.14611174272913 -5.260885957478386 24.999957870694526 0.9610676502481936 1.0576992076617102 0.42879859787878793 0.04830992186090061 43.63688116575384 1971180.8757724897 0.012820129595736926 0.020585550664641714 5.484209573050446e-06 5.260885957478386 0.09663155741351659 IFYYFSNS(ph)PSKR ddPTM_KYSE-520_SHP099_60min_R1 1 IFYYFSNSPSKR 12 1 Q08999;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IFY(0.017)Y(0.017)FS(0.021)NS(0.795)PS(0.151)KR 63.623999999999995 0.027264999999999998 39128000.0 203480.0 222790.0 191510.0 211700.0 215480.0 222390.0 180540.0 194440.0 267030.0 179150.0 True False 192192.55877267636 212086.8339853923 203855.04102683402 231819.90435007436 232437.05008651133 221001.98151861824 198790.74510060236 193765.53302263728 218544.0832785062 177562.87037659096 1.0823915966500062 1.1944323356317674 1.1480724579101493 1.3055651998551854 1.3090408461720537 1.2446407351373505 1.1195513154241619 1.091250285668858 1.2307983240809224 1.0 17.437970410157725 -10.065160564474173 4.85836177455929 0.9999944332213678 1.1938171313361607 0.354217757946649 0.0776265130263364 56968909.406358056 8.981671367951433 3547.7258112053805 0.020455629663536392 8.606754901239931e-11 10.065160564474173 0.1938226981147929 IGAEVYHNLK ddPTM_KYSE-520_SHP099_60min_R1 4 IGAEVYHNLK 10 0 P06733;A0A2R8Y6G6;P06733-2;K7EM90 P06733 ENO1 Alpha-enolase;Enolase 0 ;;; 161.63 0.00012329 21256220000.0 9855710.0 9819880.0 6688090.0 5517230.0 9609810.0 9686940.0 7106180.0 8358980.0 7735440.0 8011000.0 False True 9308994.119429206 9348118.224859606 7119214.982722356 6041585.880384314 10366047.374660548 9626480.214272056 7824542.024033442 8329984.649380599 6330879.090573673 7940028.772463683 1.1724131468784025 1.1773405982204033 0.8966233230050829 0.7609022654095108 1.3055427973523708 1.2123986562437972 0.9854551221740212 1.049112652874672 0.7973370465015692 1.0 22.920712804628863 -7.6436288848359375 7.480439304662013 0.9000959658014748 1.0685401326959578 0.15827125583454627 0.15849518823052913 0.44386633735791003 26.690774754360554 0.11587926351760483 0.04306047961904941 2.2718053354086472e-08 7.6436288848359375 0.16844416689448305 IGDEYAEDS(ph)S(ph)DEEDIR ddPTM_KYSE-520_SHP099_60min_R1 6 IGDEYAEDSSDEEDIR 16 0 Q14137;A0A075B729;Q14137-2 Q14137 BOP1 Ribosome biogenesis protein BOP1 2 IGDEYAEDS(1)S(1)DEEDIR;IGDEYAEDS(1)S(1)DEEDIR;IGDEYAEDS(1)S(1)DEEDIR;IGDEYAEDS(1)S(1)DEEDIR;IGDEYAEDS(1)S(1)DEEDIR;IGDEYAEDS(1)S(1)DEEDIR 240.66 3.1911e-20 2905820000.0 3866590.0 3583760.0 3223050.0 3429170.0 3524220.0 3681990.0 3511160.0 3670880.0 4009670.0 3468130.0 True False 3652102.5448439266 3411590.790266575 3430812.9600623334 3755077.285782442 3801556.0639311518 3659009.334645162 3866102.318419358 3658146.5740698366 3281615.003555138 3437405.066364313 1.0624591732235664 0.9924901850089372 0.99808224338572 1.092416288823978 1.1059377613450705 1.0644684766567927 1.1247153721421814 1.064217484830497 0.9546780027953029 1.0 21.71288843930653 -3.8928892288858643 19.310834999077525 1.0498766070282792 2.535526225982131 0.0001355502899961225 0.05338371424531893 4410.796712088656 817823.7032698574 0.01357885083278306 8212.849233821698 0.00012797076646646507 3.8928892288858643 1.485649618953852 IGDEYAEDS(ph)S(ph)DEEDIRNTVGNVPLEWYDDFPHVGYDLDGR ddPTM_KYSE-520_SHP099_60min_R1 2 IGDEYAEDSSDEEDIRNTVGNVPLEWYDDFPHVGYDLDGR 40 1 Q14137;A0A075B729;Q14137-2 Q14137 BOP1 Ribosome biogenesis protein BOP1 2 IGDEY(0.003)AEDS(0.999)S(0.999)DEEDIRNTVGNVPLEWYDDFPHVGYDLDGR;IGDEY(0.002)AEDS(0.999)S(0.999)DEEDIRNTVGNVPLEWYDDFPHVGYDLDGR 140.58 9.5818e-07 363650000.0 26024.0 35616.0 31376.0 31155.0 22607.9 18623.699999999997 23176.0 20507.5 49261.0 22829.0 True False 24580.39684244216 33904.953899294116 33398.54716337501 34115.961832907706 24387.01310864506 18507.462580189247 25518.856255963 20436.364268986486 40316.44416875449 22626.75282069326 1.0863422178706172 1.498445409642978 1.4760645253891858 1.5077710046713821 1.0777955326555722 0.8179460272913434 1.1278178737438973 0.9031947461014576 1.7818042424489278 1.0 14.465741936950632 -5.77088314588347 24.882848698342556 1.0987316423754718 1.405741386603099 0.19742709806372827 0.2684512996225929 279.3036239707498 735919.3361030509 0.08184720666388832 0.09403758442639049 1.694793751406192e-06 5.77088314588347 0.30700974422762717 IGDEYFTFITDCKDPK ddPTM_KYSE-520_SHP099_60min_R1 2 IGDEYFTFITDCKDPK 16 1 B4DUR8;P49368;P49368-2 B4DUR8 CCT3 T-complex protein 1 subunit gamma 0 ; 163.8 6.2308e-08 1485440000.0 3867200.0 3120600.0 2119490.0 2327200.0 3800500.0 3487700.0 2765600.0 2845400.0 2547900.0 2848800.0 False True 3652678.7069279295 2970681.6918839067 2256115.716703905 2548376.388301809 4099577.728112985 3465931.9706033734 3045173.8376549594 2835529.9715213496 2085265.587332158 2823561.8483328614 1.2936421807387044 1.0521043460188098 0.7990318037609134 0.9025396025259611 1.451917099153869 1.2275034714220239 1.0784866779004492 1.004238661602385 0.7385230780630423 1.0 21.42908480231005 -7.500267264857222 3.805807603246461 0.8664068519637396 1.1078675159844371 0.21615481553753924 0.18557195480626024 0.3767511523736364 11.81868662318241 0.13837145760249278 0.05361841640943154 3.160332192937334e-08 7.500267264857222 0.24146066402069755 IGEEDS(ph)T(ph)DDEDGLLEEHKEFLK ddPTM_KYSE-520_SHP099_60min_R1 5 IGEEDSTDDEDGLLEEHKEFLK 22 1 Q8IX21;Q8IX21-2 Q8IX21 FAM178A Protein FAM178A 2 IGEEDS(1)T(1)DDEDGLLEEHKEFLK;IGEEDS(1)T(1)DDEDGLLEEHKEFLK;IGEEDS(1)T(1)DDEDGLLEEHKEFLK;IGEEDS(1)T(1)DDEDGLLEEHKEFLK;IGEEDS(1)T(1)DDEDGLLEEHKEFLK 201.21 6.9018e-13 1439920000.0 2133430.0 2170950.0 1809060.0 1995330.0 2177640.0 1955500.0 2021210.0 2216570.0 2362520.0 2140820.0 True False 2015084.385012732 2066654.3033376143 1925674.9021983433 2184965.5632821615 2349007.8789232904 1943294.999144104 2225533.6319086566 2208881.236021329 1933545.9222826557 2121854.0003327588 0.9496809793212526 0.9739851577976205 0.9075435453600249 1.0297435935457884 1.1070544337899348 0.9158476496683314 1.0488627547228218 1.0410147143370478 0.9112530466183952 1.0 21.016893960618177 -5.273110100373348 24.944717527915184 1.0114211731720828 0.9467614190522065 0.2024000900565739 0.057745282124429524 1098.644144264097 2348212.669277708 0.016092795353679135 0.024090613712955032 5.3319970397373675e-06 5.273110100373348 -0.06465975411987634 IGEEQS(ph)AEDAEDGPPELLFIHGGHTAK ddPTM_KYSE-520_SHP099_60min_R1 7 IGEEQSAEDAEDGPPELLFIHGGHTAK 27 0 E9PC52;Q16576;Q16576-2;Q5JNZ6 E9PC52 RBBP7 Histone-binding protein RBBP7 1 IGEEQS(1)AEDAEDGPPELLFIHGGHTAK;IGEEQS(1)AEDAEDGPPELLFIHGGHTAK;IGEEQS(1)AEDAEDGPPELLFIHGGHTAK;IGEEQS(1)AEDAEDGPPELLFIHGGHTAK;IGEEQS(1)AEDAEDGPPELLFIHGGHTAK;IGEEQS(1)AEDAEDGPPELLFIHGGHTAK;IGEEQS(1)AEDAEDGPPELLFIHGGHTAK 258.02 1.4173e-40 1587840000.0 1490500.0 1517180.0 1364609.0 1383569.0 1457208.0 1385829.0 1340519.0 1452060.0 1818900.0 1445853.0 True False 1407818.9937619122 1444292.3954663915 1452573.8795915989 1515062.981774813 1571881.9792206453 1377179.5271638348 1476031.7427246827 1447023.1427733523 1488633.6107376514 1433043.8672766136 0.982397696197089 1.007849395574439 1.0136283422726622 1.0572341966433103 1.096883364923003 0.9610170062560998 1.0299975991173 1.0097549529473269 1.038791375986753 1.0 20.45065134231137 -4.534126689717599 2.0641383141526948 1.0280841046503066 0.9819197676358367 0.13972881498786538 0.03387122973764183 0.866265999261914 5.995949743512294 0.009520244596717315 0.06079278604917692 2.923299486486224e-05 4.534126689717599 -0.04616433701446998 IGEEQSPEDAEDGPPELLFIHGGHTAK ddPTM_KYSE-520_SHP099_60min_R1 2 IGEEQSPEDAEDGPPELLFIHGGHTAK 27 0 Q09028-4;Q09028-3;Q09028-2;Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5 Q09028-4 RBBP4 Histone-binding protein RBBP4 0 ; 162.71 5.6076e-10 649670000.0 714550.0 667840.0 529160.0 479310.0 788170.0 620590.0 522710.0 601370.0 663650.0 555700.0 False True 674912.4870798892 635755.9639517232 563270.5002859358 524863.4782901937 850194.4949261432 616716.6676138273 575550.6279579921 599283.9878308125 543147.8892550678 550776.9303280585 1.2253826366291194 1.1542893845845152 1.0226835389609288 0.9529510939711472 1.543627643263386 1.1197213130304733 1.0449795484628916 1.0880702419287274 0.9861485827511935 1.0 19.07110860689748 -6.663711426566419 4.861366314399886 1.0374475237337173 1.1723098548381172 0.18164717163753452 0.1480098159744416 0.43843608653476074 17.277992307027787 0.061168842377518066 0.046394178821815596 2.1691449467228618e-07 6.663711426566419 0.13486233110439994 IGEGT(ph)YGVVYK ddPTM_KYSE-520_SHP099_60min_R1 6 IGEGTYGVVYK 11 0 A0A087WZZ9;P06493;E5RIU6;A0A024QZP7;P06493-2;G3V317;K7ELV5;E7ESI2;P24941-2;G3V5T9;P24941;Q00526 A0A087WZZ9;G3V5T9 CDK1;CDC2;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 IGEGT(0.887)Y(0.113)GVVYK;IGEGT(0.542)Y(0.458)GVVYK;IGEGT(0.673)Y(0.327)GVVYK;IGEGT(0.952)Y(0.048)GVVYK;IGEGT(0.996)Y(0.004)GVVYK;IGEGT(0.979)Y(0.021)GVVYK 224.03 1.7840999999999998e-10 181374480000.0 45425740.0 43526920.0 39384620.0 35663830.0 35548950.0 36919660.0 38290660.0 38948840.0 45076090.0 38373240.0 True False 42905883.6482324 41435821.42796106 41923415.62282005 39053309.6804785 38346450.119142756 36689230.70728752 42161453.59362927 38813735.56476758 36891408.331758454 38033282.94752898 1.1281141232910579 1.089462129396672 1.1022823267888266 1.026819318604622 1.0082340294432595 0.9646611563325804 1.1085410021479225 1.020520253755515 0.9699769641935495 1.0 25.180759138749345 -5.28290067818338 3.615784267218336 1.015512198487745 1.1066642631083183 0.5568730096268868 0.03794617975770785 0.18889822972676906 5.359571284217458 0.011222239103762976 0.018622801063943557 5.213139203685906e-06 5.28290067818338 0.09115206462057324 IGEGTY(ph)GVVYK ddPTM_KYSE-520_SHP099_60min_R1 15 IGEGTYGVVYK 11 0 A0A087WZZ9;P06493;E5RIU6;A0A024QZP7;P06493-2;G3V317;K7ELV5;E7ESI2;P24941-2;G3V5T9;P24941;Q00526 A0A087WZZ9;G3V5T9 CDK1;CDC2;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 IGEGT(0.456)Y(0.544)GVVYK;IGEGT(0.002)Y(0.998)GVVYK;IGEGT(0.016)Y(0.984)GVVYK;IGEGT(0.048)Y(0.476)GVVY(0.476)K;IGEGT(0.18)Y(0.82)GVVYK;IGEGT(0.033)Y(0.967)GVVYK;IGEGT(0.206)Y(0.794)GVVYK;IGEGT(0.204)Y(0.796)GVVYK;IGEGT(0.06)Y(0.94)GVVYK;IGEGT(0.083)Y(0.916)GVVYK;IGEGT(0.436)Y(0.564)GVVYK;IGEGT(0.414)Y(0.585)GVVY(0.001)K;IGEGT(0.319)Y(0.681)GVVYK;IGEGT(0.158)Y(0.783)GVVY(0.06)K;IGEGT(0.146)Y(0.854)GVVYK 200.07 1.2915999999999997e-07 201241432000.0 42172203.0 39482193.5 37057075.1 33790616.8 35028809.3 35102134.1 34434883.9 35702326.3 42106752.2 36602905.7 True False 39832826.831387535 37585409.660279304 39445833.454362564 37002066.86115264 37785377.30524847 34883048.66060636 37915898.016692854 35578483.2630509 34461227.425323874 36278632.432127714 1.0979693599506328 1.0360205757644363 1.087302106223553 1.0199410611846622 1.0415325708856216 0.9615315220568941 1.0451303005323653 0.9807007838460643 0.9499042581000275 1.0 25.11261673693095 -5.62688962678385 0.5962918732205382 0.9799281153773661 1.089016818787086 0.5833255153507392 0.030411984307596486 0.7824573164678396 0.5502587407460378 0.020479641159288648 0.048094328483043604 2.361078210141825e-06 5.62688962678385 0.10908870340971977 IGEGTYGVVY(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 IGEGTYGVVYK 11 0 A0A087WZZ9;P06493;E5RIU6;A0A024QZP7;P06493-2;G3V317;K7ELV5;E7ESI2;P24941-2;G3V5T9;P24941;Q00526 A0A087WZZ9;G3V5T9 CDK1;CDC2;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 IGEGT(0.002)Y(0.026)GVVY(0.972)K 117.3 0.00031723 0.0 231530.0 220380.0 170260.0 175230.0 222260.0 207440.0 202080.0 225290.0 283430.0 225400.0 True False 218686.56935638757 209792.61400287593 181235.2320256317 191883.8065151796 239750.5975135881 206145.2900140388 222508.21851074375 224508.52157308106 231966.256688863 223403.13135854658 0.9788876638681073 0.939076425326256 0.8112475009795708 0.8589127885016945 1.0731747404596803 0.9227502262857268 0.9959941794801142 1.0049479620442758 1.0383303728924604 1.0 17.76928988211921 -5.749083383901017 24.99997320035093 1.0014642466297181 0.8939069239889915 0.48467502105663807 0.05482773908539318 212.81104087732604 430580.1410193044 0.01701919708014571 0.021815177344320095 1.78203658619953e-06 5.749083383901017 -0.1075573226407266 IGEGTYGVVYK ddPTM_KYSE-520_SHP099_60min_R1 2 IGEGTYGVVYK 11 0 A0A087WZZ9;P06493;E5RIU6;A0A024QZP7;P06493-2;G3V317;K7ELV5;E7ESI2;P24941-2;G3V5T9;P24941;Q00526 A0A087WZZ9;G3V5T9 CDK1;CDC2;CDK2;CDK3 Cyclin-dependent kinase 1;Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 0 ; 125.97 0.006264100000000001 942920000.0 747000.0 708440.0 632340.0 627120.0 698460.0 657630.0 626580.0 672280.0 774790.0 675820.0 False True 705562.4208924186 674405.4790098802 673101.6481797732 686721.2962494964 753424.8283062214 653525.4872345369 689920.821231503 669948.0175913313 634107.6668664721 669832.7605800034 1.0533411657582665 1.0068266568895754 1.0048801548567725 1.0252130631157386 1.1247954305099026 0.9756547091973433 1.0299896658295804 1.000172068340205 0.946665651762692 1.0 19.35344141239618 -7.430592753712592 2.95490195829622 0.9727498580977317 1.0310547553355351 0.2647133909813081 0.038970977719524104 0.372622861710986 6.134576330203485 0.027620779475012226 0.010694718341693062 3.7102847924773954e-08 7.430592753712592 0.05830489723780341 IGEHMEEHGIK ddPTM_KYSE-520_SHP099_60min_R1 9 IGEHMEEHGIK 11 0 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic 0 ;;;;;;;; 190.26 9.084700000000001e-07 20632780000.0 21712830.0 18358330.0 12722320.0 11758820.0 18419910.0 17496570.0 12995260.0 15602640.0 15468500.0 15006600.0 False True 20508376.036446474 17476368.270384863 13542421.103631722 12876374.717381846 19869452.122048594 17387367.4166069 14308947.702315558 15548518.08352355 12659810.329152446 14873653.198958144 1.378839197211014 1.1749882854340743 0.910497301670334 0.8657170195607222 1.3358824396578235 1.1690044929798977 0.9620331677034031 1.0453731760138576 0.8511567507866346 1.0 23.82625570331102 -4.445550261128833 3.5283357770558057 1.0285264192317625 1.3698072104989039 0.3932728450634576 0.13914775695714846 0.28051416477653346 6.188759919569907 0.037873427793969495 0.18832967907233758 3.5846746024815425e-05 4.445550261128833 0.3412807912671414 IGEHTPS(ph)ALAIMENANVLAR ddPTM_KYSE-520_SHP099_60min_R1 2 IGEHTPSALAIMENANVLAR 20 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BR04;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 IGEHT(0.035)PS(0.965)ALAIMENANVLAR;IGEHT(0.003)PS(0.997)ALAIMENANVLAR 235.76 2.4955000000000003e-26 270930000.0 285020.0 358460.0 250570.0 246040.0 263160.0 343230.0 264740.0 306540.0 386770.0 328660.0 True False 269209.3724267162 341239.0435405704 266722.14312617545 269423.5676253768 283869.1948244212 341087.7742552957 291502.5028134125 305476.68428697414 316542.31767826807 325748.3280936107 0.8264336274639394 1.0475542439085308 0.8187981951806892 0.8270911755775834 0.8714371505318834 1.0470898691988892 0.894870296094484 0.9377690012247397 0.9717388866760442 1.0 18.313398248603217 -6.201227428032912 24.99422040677926 0.9616906041575802 0.8815214274119275 0.28721108069400814 0.07176275832400575 382.9415531235455 158960.25182740786 0.023887585263758674 0.023887579766358198 6.291766141452195e-07 6.201227428032912 -0.08016917674565271 IGELGAPEVWGLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 13 IGELGAPEVWGLSPK 15 0 A0A494C050;Q8N5F7 A0A494C050 NKAP NF-kappa-B-activating protein 1 IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK;IGELGAPEVWGLS(1)PK 262.73 5.172600000000001e-25 56886536000.0 13791401.0 12952373.0 11021964.0 9591029.0 10752732.0 11379891.0 10755634.0 11952597.0 14145290.0 11364951.0 True False 13026364.494053712 12330121.55917175 11732457.43520593 10502557.512511995 11598910.833723912 11308864.87911276 11842918.449592188 11911136.230764119 11576861.909742808 11264266.375938078 1.1564325682034386 1.094622689810539 1.0415642744624691 0.9323782980618079 1.0297085000138737 1.0039592905286712 1.0513705956821284 1.0574267185484745 1.0277510779106285 1.0 23.425250020371553 -4.602024120868003 2.420084617162951 1.0172470996199061 1.152552961212644 0.6508103012423112 0.03327615714355622 0.21108575377444388 2.258272705486815 0.009610872635407575 0.04377319872515055 2.5002064954935625e-05 4.602024120868003 0.13530586159273783 IGEVS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 IGEVSSPK 8 0 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 IGEVS(0.577)S(0.423)PK 74.84100000000001 0.017287999999999998 758110000.0 2893300.0 3123500.0 2459200.0 2218500.0 2237400.0 2661200.0 2495400.0 2503500.0 2654100.0 3215100.0 True False 2732802.881349441 2973442.3715309137 2617723.9668591227 2429345.5729836505 2413470.650935402 2644590.463677982 2747659.3847570787 2494815.9428212955 2172182.344416295 3186616.715309951 0.8575875687276155 0.9331032368107369 0.8214743725790398 0.7623588871896558 0.7573771390013726 0.8299054137801295 0.8622497244667291 0.7829043043787064 0.6816578642734618 1.0 21.603594072225537 -4.894095542832911 6.056620325380141 0.8018407163393051 0.8942975192039082 0.13941060287726903 0.08058750475694368 0.33301416163786923 16.591518745148075 0.020291566194452656 0.043251360926570795 1.2761580289000927e-05 4.894095542832911 0.09245680286460312 IGEVSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 IGEVSSPK 8 0 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 IGEVS(0.257)S(0.743)PK;IGEVS(0.04)S(0.96)PK;IGEVSS(1)PK;IGEVS(0.029)S(0.971)PK;IGEVS(0.02)S(0.98)PK;IGEVS(0.156)S(0.844)PK 128.87 0.00082625 9832760000.0 35846000.0 38511100.0 28508700.0 26675400.0 27247600.0 31009600.0 30441700.0 31363300.0 32103200.0 37033800.0 True False 33857550.92277063 36660968.94966043 30346416.41753276 29210621.995748527 29391831.10236317 30816057.58397293 33519044.11836158 31254508.032549232 26274068.135814514 36705709.34386044 0.9224055747184134 0.9987811053103243 0.8267492158575771 0.7958059527498118 0.8007427625773258 0.8395439874295022 0.9131833907459447 0.8514890078749289 0.715803307046271 1.0 25.12950114693796 -4.769489011878247 24.953434815971722 0.8368113427564184 0.9605933460362188 0.29072520349737074 0.0730269308117013 175.57953068521155 544292.8319709253 0.018421070276494696 0.03944483087581905 1.7002429710906863e-05 4.769489011878247 0.12378200327980038 IGFPETTEEELEEIAS(ph)ENSDCIFPSAPDVK ddPTM_KYSE-520_SHP099_60min_R1 3 IGFPETTEEELEEIASENSDCIFPSAPDVK 30 0 Q9Y3F4-2;Q9Y3F4 Q9Y3F4-2 STRAP Serine-threonine kinase receptor-associated protein 1 IGFPET(0.002)T(0.002)EEELEEIAS(0.498)ENS(0.498)DCIFPS(0.001)APDVK;IGFPET(0.007)T(0.007)EEELEEIAS(0.493)ENS(0.493)DCIFPS(0.001)APDVK;IGFPET(0.002)T(0.002)EEELEEIAS(0.497)ENS(0.497)DCIFPS(0.002)APDVK 65.275 0.019593 69603000.0 75106.0 91972.0 63378.0 63382.0 67436.0 79496.0 68654.0 91648.0 104043.0 87199.0 True False 70939.72045990091 87553.52706721354 67463.44728838543 69405.80622350695 72742.82954164631 78999.83597645599 75594.21631847094 91330.09447880389 85151.41391059294 86426.4846997954 0.8208099716922636 1.013040474471835 0.7805876580856139 0.8030617751559581 0.841672894533665 0.9140697582559782 0.8746649430559321 1.0567373507790037 0.9852467586338672 1.0 16.399185861961147 -7.246662130793971 20.468220748410438 1.0157439342976307 0.865236606324155 0.5369248698579396 0.06382640014892198 55.53753455465363 76926.9446068331 0.03091135987374504 0.017673679860332425 5.6667997908873874e-08 7.246662130793971 -0.15050732797347566 IGFPS(ph)TSPAK ddPTM_KYSE-520_SHP099_60min_R1 1 IGFPSTSPAK 10 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 IGFPS(0.887)T(0.095)S(0.018)PAK 112.94 0.0017399999999999998 234720000.0 1638300.0 1636100.0 1298700.0 1096100.0 1265300.0 1500300.0 1151200.0 1409400.0 1729600.0 1500100.0 True False 1547420.2331299183 1557499.3001638341 1382416.2799934682 1200273.0144455198 1364871.9114277994 1490936.0711919717 1267574.5306292984 1404511.1203564336 1415548.2396678454 1486810.2810601387 1.0407650880827666 1.0475440747243772 0.9297866026375372 0.8072805452957256 0.9179865977618922 1.0027749270935167 0.8525462507062307 0.9446471673272104 0.9520705215049485 1.0 20.50378913868114 -4.778412077060361 6.397741515242269 0.919139081477833 1.044921520655046 0.405894207517686 0.05683374753065822 0.13105395942870887 20.45040814311701 0.01498376927208378 0.034097022928668744 1.665666007819622e-05 4.778412077060361 0.125782439177213 IGFPS(ph)TTPAK ddPTM_KYSE-520_SHP099_60min_R1 1 IGFPSTTPAK 10 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 IGFPS(0.425)T(0.425)T(0.15)PAK 82.26100000000001 0.0079542 393130000.0 918010.0 1477700.0 1050100.0 811130.0 885290.0 1215300.0 868780.0 945250.0 1232900.0 1236900.0 True False 867086.1552924361 1406709.0739270789 1117791.1262194056 888219.5513248731 954957.286388934 1207714.8619073557 956604.7608757142 941971.1483730077 1009036.4388797919 1225942.028293638 0.7072815314924104 1.147451544576742 0.9117813896756886 0.724520026906302 0.7789579477245904 0.9851321139453452 0.7803017914372277 0.7683651646106927 0.8230702721598081 1.0 20.22545932855621 -5.012382211558416 24.90428354737017 0.8280807775856882 0.9529289932042979 0.07270019561660224 0.1309254796960761 1038.6068126138339 2088957.7506566222 0.03349086061465978 0.06218696961134757 9.718915102184536e-06 5.012382211558416 0.1248482156186097 IGFPST(ph)SPAK ddPTM_KYSE-520_SHP099_60min_R1 1 IGFPSTSPAK 10 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 IGFPS(0.355)T(0.586)S(0.059)PAK 101.93 0.011963 273740000.0 1468500.0 1395800.0 1216700.0 1016800.0 1151900.0 1411900.0 1059100.0 1284600.0 1589700.0 1412900.0 True False 1387039.377617828 1328743.6728614848 1295130.428788831 1113436.3662879316 1242547.9765855402 1403087.8083822883 1166164.1638199168 1280144.022427893 1301050.5530758414 1400382.8052195653 0.9904715856607186 0.9488431790999832 0.924840282215382 0.7950942857466438 0.8872916547920066 1.001931616949766 0.832746702882484 0.9141386324199974 0.9290677864841752 1.0 20.417389821995318 -8.18733288367366 2.7418065807299965 0.9999382737844789 0.9094403986046665 0.15936673377566501 0.06031501561157739 1.616204533183275 19.88403997438029 0.0600688937867923 0.01613301720924672 6.496315614268644e-09 8.18733288367366 -0.09049787517981234 IGFPSTS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 1 IGFPSTSPAK 10 0 Q9UDT6;Q9UDT6-2 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 IGFPS(0.056)T(0.069)S(0.874)PAK 164.54 6.3552e-05 1222300000.0 2929800.0 2924800.0 2179500.0 1731500.0 1986400.0 2605500.0 1948000.0 2445300.0 2824500.0 2477100.0 True False 2767278.153588499 2784288.217785695 2319994.0573232984 1896061.239405542 2142718.37893004 2589238.1080388464 2144922.85064791 2436817.82503731 2311641.9998507346 2455154.8211546377 1.1271297963551938 1.134058102485068 0.9449481708172789 0.7722776678147902 0.8727426720577802 1.0546129660455184 0.873640567253177 0.9925312261535083 0.9415463252796374 1.0 21.22738257254821 -4.78038479767269 5.87418241600203 0.9249822090385377 1.1323205176812758 0.529913297529098 0.07492798889033911 0.1153885246647984 12.94732830033211 0.020402658422067548 0.04690663491263193 1.6581171159060814e-05 4.78038479767269 0.20733830864273817 IGFPWSEIR ddPTM_KYSE-520_SHP099_60min_R1 4 IGFPWSEIR 9 0 E7EQR4;P15311;P26038;A0A2R8Y7M3;A0A2R8Y5S7;P35241;P35241-5;P35241-4 E7EQR4;P26038;A0A2R8Y7M3 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 ;;; 180.93 0.00015358 2379390000.0 865062.0 851110.0 590581.0 581296.0 1001559.0 796446.0 706123.0 673254.0 687932.0 569451.0 False True 817075.2864016559 810221.398057844 628650.7962230108 636542.1970669852 1080375.9952088173 791475.0850873571 777504.8039363722 670918.6390126647 563020.8901544757 564406.1071661746 1.447672652771437 1.4355291124078775 1.1138270621829416 1.127808840097423 1.9141819719727606 1.4023148846869724 1.377562705407538 1.188716122122205 0.9975457086765877 1.0 19.106374073163423 -7.490115788801303 2.214692694460375 0.9923572519841602 1.4043811833076834 0.38655680623368727 0.20604197756907683 0.371738567854345 3.3581373920807733 0.18112539427951807 0.06134954604867339 3.235073939701805e-08 7.490115788801303 0.4120239313235231 IGGAQNR ddPTM_KYSE-520_SHP099_60min_R1 2 IGGAQNR 7 0 P14174 P14174 MIF Macrophage migration inhibitory factor 0 ; 94.669 0.048503 1195180000.0 872380.0 690320.0 254490.0 1549410.0 505080.0 795120.0 722270.0 932860.0 439460.0 744210.0 False True 823987.3423535855 657155.991008555 270894.832598397 1696665.4605528961 544826.9224879111 790157.3611452122 795284.1002759063 929624.1263911598 359665.1418850785 737616.8783866188 1.1170939365648518 0.8909177789504289 0.3672568246959346 2.3001988027497333 0.7386313117991619 1.071230044075882 1.0781804532665011 1.2603075575283966 0.487604273199076 1.0 19.492512142793643 -7.7520586384258445 24.991701461980657 0.7438020650902502 1.0972621755361247 0.08191564367364113 0.4806716497302859 464.92464235704745 1238651.993683602 0.32615337225410823 0.1196136662177642 1.7698699744015856e-08 7.7520586384258445 0.35346011044587455 IGGIFAFK ddPTM_KYSE-520_SHP099_60min_R1 1 IGGIFAFK 8 0 H0YF61;P22307-6;P22307-2;P22307-4;P22307-7;P22307-8;P22307 H0YF61 SCP2 Non-specific lipid-transfer protein 0 117.7 0.0074247 41505000.0 113870.0 131180.0 100930.0 95325.0 121410.0 133060.0 104550.0 117420.0 103870.0 80753.0 False True 107553.4041057827 124877.91589480557 107436.10929370977 104384.65933949371 130964.27627159526 132229.52318389915 115118.93430967073 117012.69742603395 85009.82634961787 80037.59124488328 1.3437861189089504 1.5602408062572584 1.3423206223810247 1.3041954126295237 1.636284578716225 1.6520927370156513 1.4383108301879357 1.4619717510990742 1.0621237474466407 1.0 16.28839012911003 -7.786121551262636 4.455363888983849 1.00610080489499 1.4735393194930777 0.7013448671529725 0.11414326846349274 0.11285372821154364 4.96263596632803 0.10988084466273158 0.030896608512788377 1.636358469844149e-08 7.786121551262636 0.4674385145980877 IGGIGTVPVGR ddPTM_KYSE-520_SHP099_60min_R1 2 IGGIGTVPVGR 11 0 Q5VTE0;P68104;A0A087WVQ9;A0A2U3TZH3;Q05639 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 2 0 ; 139.74 0.0007352 2054860000.0 1377000.0 1506700.0 1378800.0 1032160.0 1718040.0 1676850.0 1371250.0 1484090.0 1756180.0 1729860.0 False True 1300615.0650185551 1434315.870397192 1467679.6541579997 1130256.1760697814 1853239.9736895752 1666384.1571540753 1509869.3321103407 1478942.0381792109 1437301.9816951186 1714534.786210717 0.7585819054118095 0.8365627118987564 0.8560220918011875 0.6592203232969999 1.0808996053007531 0.9719162133985867 0.8806291620640103 0.862590861424172 0.8383043571088407 1.0 20.7093857447465 -5.756119717954181 24.99999985715663 0.9309078386757574 0.7874104528118177 0.47200669071862944 0.08313295847993238 140.4923182945523 660246.0810945326 0.026065883321767184 0.03265793489866625 1.7533970924120219e-06 5.756119717954181 -0.14349738586393979 IGHPAPNFK ddPTM_KYSE-520_SHP099_60min_R1 2 IGHPAPNFK 9 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5 Q06830 PRDX1 Peroxiredoxin-1 0 ; 130.27 0.0009765 7683900000.0 11260500.0 10973600.0 7560900.0 7447400.0 10385400.0 10622500.0 7461200.0 9583800.0 9088700.0 8794300.0 False True 10635857.617749764 10446411.784290593 8048287.711867739 8155198.656857537 11202671.895157106 10556201.037283694 8215450.91029476 9550556.034675736 7438421.187482167 8716389.343861878 1.2202136914913724 1.1984792523806895 0.9233511026598853 0.9356166108619811 1.2852422549304867 1.2110749785078636 0.9425291351951963 1.0957009442678558 0.8533833097669435 1.0 23.055299209549613 -6.7748565210157485 24.994031116427035 0.9808784056587057 1.1211192294271688 0.2709810258533639 0.12475243410908694 397.42060334595124 740325.365166145 0.056030047577572975 0.03801729957198785 1.679358740548541e-07 6.7748565210157485 0.14024082376846314 IGIHHKNS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 2 IGIHHKNSPPK 11 1 A0A2R8YFF1;Q8N302 A0A2R8YFF1 AGGF1 Angiogenic factor with G patch and FHA domains 1 1 IGIHHKNS(1)PPK;IGIHHKNS(1)PPK 145.71 4.6946999999999996e-05 11823600000.0 16076100.0 12777000.0 13196100.0 13594000.0 14151200.0 14616600.0 13615200.0 13552500.0 15420300.0 12387300.0 True False 15184326.686089149 12163173.741331998 14046741.720506534 14885969.672814874 15264818.930686086 14525372.377647515 14991557.287546907 13505489.54067727 12620362.234129308 12277558.159173578 1.2367546127031526 0.990683455426671 1.1440989762293288 1.2124536068022889 1.2433106593985448 1.1830831659953824 1.2210536568581005 1.1000142997153064 1.0279211933278112 1.0 23.549520320852075 -7.623420693939904 2.807264598974363 1.0080518266499114 1.1717102363760719 0.46706767627813084 0.06910870320143736 0.26558887589941704 3.930016231745677 0.06270427162043628 0.01959371805503892 2.3800128729327266e-08 7.623420693939904 0.16365840972616041 IGKPHTVPCK ddPTM_KYSE-520_SHP099_60min_R1 2 IGKPHTVPCK 10 1 P15880;H0YEN5;E9PPT0;E9PMM9;I3L404;E9PM36 P15880 RPS2 40S ribosomal protein S2 0 ; 108.67 0.00081272 3743500000.0 10901900.0 9588400.0 7215200.0 6895400.0 9868200.0 9708400.0 6710200.0 8490700.0 8447500.0 8027900.0 False True 10297149.874601152 9127758.87151817 7680303.336728168 7550736.742822394 10644771.197622545 9647806.27445188 7388532.501241061 8461247.74344428 6913646.944145545 7956779.051611695 1.2941354545361416 1.1471675677194135 0.9652528098254122 0.948969010430539 1.3378241532880544 1.2125266030225705 0.9285833442546664 1.0634011185380852 0.8689002043792008 1.0 22.923753107294797 -6.767368581602994 24.999814556424763 0.9705045723036665 1.141674563978653 0.3441613275503106 0.12514386159051266 202.03993484357807 851868.412097261 0.0553825606346943 0.03843625120650243 1.708564656996589e-07 6.767368581602994 0.17116999167498648 IGNEES(ph)DLEEACILPHSPINVDK ddPTM_KYSE-520_SHP099_60min_R1 4 IGNEESDLEEACILPHSPINVDK 23 0 O95714;Q9BVR0 O95714 HERC2;HERC2P3 E3 ubiquitin-protein ligase HERC2;Putative HERC2-like protein 3 1 IGNEES(1)DLEEACILPHSPINVDK;IGNEES(1)DLEEACILPHSPINVDK;IGNEES(1)DLEEACILPHSPINVDK;IGNEES(1)DLEEACILPHSPINVDK 313.12 8.110799999999998e-61 2567380000.0 1477920.0 1330950.0 1055970.0 1256970.0 1258930.0 1244220.0 1335290.0 1361040.0 1303070.0 1295700.0 True False 1395936.8314395233 1267009.1642033204 1124039.5158117393 1376432.0508781886 1358000.6286681427 1236454.3614600247 1470274.144374563 1356318.8699091226 1066465.3357215412 1284221.106039346 1.0869910367263147 0.9865973688213949 0.8752694614079182 1.0718030130521912 1.0574507943233697 0.9628048905638701 1.144876172382045 1.0561412388651146 0.8304374773987454 1.0 20.292462183875166 -4.253298135121248 22.520476886327288 1.0038902133679808 1.0869912055408988 0.07944655014269308 0.08872396878548287 760.689360140344 2104026.4142601597 0.022274688825067553 0.22549681412707717 5.5808694684906596e-05 4.253298135121248 0.083100992172918 IGNEESDLEEACILPHS(ph)PINVDK ddPTM_KYSE-520_SHP099_60min_R1 2 IGNEESDLEEACILPHSPINVDK 23 0 O95714;Q9BVR0 O95714 HERC2;HERC2P3 E3 ubiquitin-protein ligase HERC2;Putative HERC2-like protein 3 1 IGNEESDLEEACILPHS(1)PINVDK;IGNEESDLEEACILPHS(1)PINVDK 177.06 4.9506000000000003e-11 616530000.0 377910.0 356650.0 301620.0 300940.0 324050.0 373190.0 352180.0 450970.0 484040.0 412490.0 True False 356946.57895509235 339515.99865743605 321062.9078090633 329541.24711909017 349550.8914077124 370860.78278219805 387781.791345575 449405.69032718963 396150.5376554252 408835.6595123637 0.8730808349272621 0.8304461481231645 0.7853104305823254 0.8060481992009907 0.8549912006810686 0.9071145682950944 0.9485028576227901 1.0992331022768795 0.9689725649859686 1.0 18.641161511118355 -6.654249670399608 1.576129995323785 1.0252630031500598 0.8238761700554837 0.8126000536077793 0.04011717279662234 0.15137709556012974 0.7680094011152825 0.02125090539194534 0.01408091945583085 2.2169215732418636e-07 6.654249670399608 -0.20138683309457606 IGNSYFK ddPTM_KYSE-520_SHP099_60min_R1 1 IGNSYFK 7 0 P31948;P31948-2;P31948-3 P31948 STIP1 Stress-induced-phosphoprotein 1 0 104.75 0.031119 754600000.0 844310.0 865930.0 700610.0 613190.0 815810.0 889740.0 710500.0 775010.0 757130.0 750350.0 False True 797474.4412097434 824329.4230125706 745772.4416156341 671467.3932377044 880009.6056760562 884186.8026277055 782324.2738117764 772321.6711986946 619654.2776941005 743702.482763467 1.072303050873878 1.1084128964441642 1.0027833157749797 0.9028709851050251 1.183281790866283 1.1888985489764987 1.051931776407143 1.038482039657692 0.8332018408646086 1.0 19.50436606285874 -7.607367151239118 6.516988292602244 0.918203783718079 1.0718204001851441 0.33537938046649773 0.08669677716281853 0.25865363868187435 16.093432170630585 0.06367053871332344 0.023445510658714735 2.469635439929965e-08 7.607367151239118 0.15361661646706515 IGPLGLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 13 IGPLGLSPK 9 0 P30050 P30050 RPL12 60S ribosomal protein L12 1 IGPLGLS(1)PK;IGPLGLS(1)PK;IGPLGLS(1)PK;IGPLGLS(1)PK;IGPLGLS(1)PK;IGPLGLS(1)PK;IGPLGLS(1)PK;IGPLGLS(1)PK;IGPLGLS(1)PK;IGPLGLS(1)PK;IGPLGLS(1)PK;IGPLGLS(1)PK;IGPLGLS(1)PK 131.12 0.00056079 172529110000.0 186793060.0 186625500.0 142406493.0 115714618.0 138785199.0 167074037.0 135302946.0 153785711.0 187737560.0 164340614.0 True False 176431276.59906647 177659730.8494135 151586243.3972249 126712100.50385149 149706804.58153626 166031265.96211585 148980688.21118054 153252264.26239586 153649151.582757 162884684.015023 1.083166767127068 1.0907086318381403 0.9306353406637298 0.7779252007031228 0.9190968781799563 1.0193178503314815 0.9146390227668055 0.9408635636255479 0.9433001789694715 1.0 27.27927571327299 -4.7669468779019715 9.091209972759346 0.9252323962985393 1.0872252393859776 0.5124915168829165 0.060758641425969935 0.08598412459342311 78.51644572160528 0.01669912561130182 0.03804237068712121 1.7102244937947762e-05 4.7669468779019715 0.16199284308743833 IGPLGLS(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 1 IGPLGLSPKK 10 1 P30050 P30050 RPL12 60S ribosomal protein L12 1 IGPLGLS(1)PKK 101.53 0.0010611 0.0 409030.0 540960.0 439500.0 231230.0 347980.0 367240.0 264310.0 281210.0 646130.0 380940.0 True False 386340.29051891057 514971.46960248565 467830.8732248634 253206.02967816548 375364.04626463755 364947.91893923865 291029.0342170166 280234.5481449075 528809.079611809 377565.1679668351 1.0232413455916205 1.363927378088331 1.239073179721804 0.6706286785978277 0.9941702204309512 0.9665825926275469 0.7708047746676152 0.7422150450317043 1.4005769718096956 1.0 18.526366150366908 -5.224873451042325 24.70371872323422 0.9211961232908479 1.2242654570741045 0.2695118633661421 0.20517613741483468 609.9757065548362 412094.89490336954 0.05410069889471085 0.09370134646614628 5.95835738658904e-06 5.224873451042325 0.3030693337832566 IGPPS(ph)SPSATDKEENPAVLAENCFR ddPTM_KYSE-520_SHP099_60min_R1 2 IGPPSSPSATDKEENPAVLAENCFR 25 1 A0A1B0GUZ7;Q14156-3;Q14156-2;Q14156 A0A1B0GUZ7 EFR3A Protein EFR3 homolog A 1 IGPPS(0.493)S(0.493)PS(0.011)AT(0.002)DKEENPAVLAENCFR;IGPPS(0.494)S(0.494)PS(0.011)AT(0.002)DKEENPAVLAENCFR 182.09 1.3397e-11 1060040000.0 241390.0 317260.0 233580.0 357870.0 330890.0 444200.0 394660.0 666030.0 786320.0 466880.0 True False 227999.61550096492 302018.3533830315 248636.9405412138 391881.8572024611 356929.1604934361 441427.58303237654 434556.08431042224 663719.6973825699 643544.1095141185 462743.80642714346 0.49271240875454536 0.6526686023415911 0.5373101424326905 0.8468656992476912 0.7713321184119029 0.9539351513759848 0.9390856847239959 1.434313518979684 1.390713609940971 1.0 18.819854154977516 -6.440998765017649 0.8518781856665151 1.2947834901809328 0.5851943050835954 0.7518293051059664 0.15099239334722253 0.2894589549117173 0.44165538376153035 0.10574454462844592 0.08291878455597404 3.622440285111728e-07 6.440998765017649 -0.7095891850973374 IGPPSS(ph)PSATDKEENPAVLAENCFR ddPTM_KYSE-520_SHP099_60min_R1 1 IGPPSSPSATDKEENPAVLAENCFR 25 1 A0A1B0GUZ7;Q14156-3;Q14156-2;Q14156 A0A1B0GUZ7 EFR3A Protein EFR3 homolog A 1 IGPPS(0.077)S(0.919)PS(0.003)AT(0.001)DKEENPAVLAENCFR 209.05 3.0841e-21 739110000.0 110210.0 198780.0 137920.0 193010.0 167930.0 291350.0 219110.0 355910.0 414440.0 265620.0 True False 104096.43160181188 189230.31042513714 146810.5438798024 211353.6123694275 181145.13560900238 289531.57657920505 241259.77710752742 354675.4312800188 339188.1431822051 263266.813449233 0.3954027863898816 0.7187776839241734 0.5576492606733836 0.8028114504838029 0.6880667306133268 1.09976480812701 0.9164078599449098 1.3472090410226072 1.2883816943665494 1.0 18.006166145878648 -6.2247166944059344 0.8432842465078821 1.2222977979203622 0.5559468923592675 0.7486279869813839 0.14673919371755664 0.2875893362238022 0.44455374422368804 0.09010413702643985 0.08807711656128356 5.960508417019464e-07 6.2247166944059344 -0.6663509055610947 IGQQVDREPGDVAT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 4 IGQQVDREPGDVATPPR 17 1 H3BT22;Q9Y5N6 H3BT22 ORC6 Origin recognition complex subunit 6 1 IGQQVDREPGDVAT(1)PPR;IGQQVDREPGDVAT(1)PPR;IGQQVDREPGDVAT(1)PPR;IGQQVDREPGDVAT(1)PPR 180.93 1.5186e-08 3338200000.0 2247630.0 2355160.0 2058470.0 1482130.0 1771520.0 2292680.0 1636230.0 1931660.0 2603600.0 2154600.0 True False 2122949.4833606784 2242014.578432768 2191162.26986845 1622991.189581366 1910928.545429999 2278370.5336935357 1801636.0964659287 1924959.522312833 2130851.8714148947 2135511.9202534338 0.9941173651274845 1.0498721909108777 1.0260594891029275 0.7600009975073125 0.8948339399590979 1.0668966593373772 0.8436553687099616 0.9014042506886999 0.9978178305658972 1.0 21.026150520332802 -5.095199222777614 24.919590931207644 0.9187180637255753 1.026091840814358 0.2334987126247816 0.08252527304319647 66.82586106784656 17486.13850340616 0.022565320281639472 0.03908430958927344 8.031576072688336e-06 5.095199222777614 0.10737377708878271 IGQQVDREPGDVAT(ph)PPRK ddPTM_KYSE-520_SHP099_60min_R1 2 IGQQVDREPGDVATPPRK 18 2 H3BT22;Q9Y5N6 H3BT22 ORC6 Origin recognition complex subunit 6 1 IGQQVDREPGDVAT(1)PPRK;IGQQVDREPGDVAT(1)PPRK 165.13 1.8713e-08 1461240000.0 1291870.0 1270870.0 1162910.0 848850.0 963730.0 1189910.0 1030720.0 1129190.0 1403200.0 1215600.0 True False 1220207.395821002 1209815.4975852387 1237873.0393217888 929524.4487839416 1039570.0681263836 1182483.3303152963 1134915.2364578096 1125273.1034449262 1148414.2517934334 1204830.729722489 1.012762511545547 1.0041373179981041 1.0274248562757946 0.7714979588859265 0.8628349547208427 0.9814518348047614 0.9419706921977471 0.9339677978699237 0.9531747684240673 1.0 20.200399041469282 IGRPS(ph)ETGIIGIIDPECR ddPTM_KYSE-520_SHP099_60min_R1 1 IGRPSETGIIGIIDPECR 18 1 Q16531;F5H2L3;F5GY55;F5GWI0;F5GZY8 Q16531 DDB1 DNA damage-binding protein 1 1 IGRPS(0.651)ET(0.349)GIIGIIDPECR 53.589 0.041181 34448000.0 89213.0 101090.0 81330.0 104660.0 83130.0 96511.0 96273.0 98262.0 105700.0 99597.0 True False 84264.17704829366 96233.48466081655 86572.66193260094 114606.85493282363 89671.85805500115 95908.63905006227 106005.21437393545 97921.15205652318 86507.54448016387 98714.64806529353 0.8536137108300098 0.9748652965582592 0.8769991448010691 1.1609913744211335 0.908394648742392 0.9715745426821026 1.0738549592338076 0.991961719721216 0.8763394914090619 1.0 16.590976558690713 -3.8847716815532753 1.1498703417969596 0.9909867165382229 0.6783650285041849 0.18274474059166723 0.08256913637147528 5.873291759932453 3.646473823912015 0.024530878425598462 2.7141949074372844 0.00013038520628659003 3.8847716815532753 -0.312621688034038 IGS(ph)DPLAYEPK ddPTM_KYSE-520_SHP099_60min_R1 10 IGSDPLAYEPK 11 0 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 IGS(1)DPLAYEPK;IGS(1)DPLAYEPK;IGS(1)DPLAYEPK;IGS(1)DPLAYEPK;IGS(1)DPLAYEPK;IGS(1)DPLAYEPK;IGS(1)DPLAYEPK;IGS(1)DPLAYEPK;IGS(1)DPLAYEPK;IGS(1)DPLAYEPK 180.2 3.7918000000000003e-06 19917710000.0 13928620.0 18722330.0 14418520.0 28137530.0 24864880.0 29327140.0 31540340.0 45501400.0 51063700.0 27806890.0 True False 13155971.682584397 17822881.16400972 15347960.869647667 30811712.391343124 26821604.594185453 29144098.440909777 34728745.371254764 45343566.26350658 41791819.291123375 27560542.588033028 0.47734806528434637 0.6466810697605255 0.5568816659042066 1.1179646515639274 0.9731885541989138 1.0574573540349796 1.2600893200968482 1.6452348903753098 1.516364170176739 1.0 24.71610095506067 -5.6351285929873836 0.6783631938547569 1.4099752110337076 0.4425614227873654 0.7187873377325011 0.1953173937367238 0.46570495450171256 0.4399553566608905 0.12273639741379713 0.2673802004628905 2.31670857957315e-06 5.6351285929873836 -0.9674137882463423 down IGS(ph)LIDVNQSK ddPTM_KYSE-520_SHP099_60min_R1 5 IGSLIDVNQSK 11 0 P61326;Q96A72;F5H6P7;P61326-2 P61326 MAGOH;MAGOHB Protein mago nashi homolog;Protein mago nashi homolog 2 1 IGS(1)LIDVNQSK;IGS(1)LIDVNQSK;IGS(1)LIDVNQSK;IGS(1)LIDVNQSK;IGS(1)LIDVNQSK 190.37 8.103199999999999e-07 4748650000.0 5127630.0 4806830.0 3682150.0 3364540.0 3804820.0 4593050.0 3824820.0 4283160.0 4913060.0 4743800.0 True False 4843190.142223012 4575902.671601075 3919507.2806483037 3684304.8700141637 4104237.68753554 4564383.071244612 4211470.132245964 4268302.717657055 4020972.152163796 4701773.62262055 1.030077271037061 0.9732290490520638 0.8336231378285186 0.7835989491898812 0.8729126531719383 0.9707789948212431 0.8957194604147459 0.907806938454451 0.8552032647464411 1.0 22.164773648216244 -4.576583607349765 5.21175567428009 0.8856238614381841 1.0178926040263867 0.3746703545131903 0.059469139887419635 0.17741233357346128 10.07296300098647 0.01589219947860041 0.0458869223800568 2.6510406839866834e-05 4.576583607349765 0.13226874258820265 IGS(ph)LIDVNQSKDPEGLR ddPTM_KYSE-520_SHP099_60min_R1 3 IGSLIDVNQSKDPEGLR 17 1 P61326;Q96A72;F5H6P7;P61326-2 P61326 MAGOH;MAGOHB Protein mago nashi homolog;Protein mago nashi homolog 2 1 IGS(1)LIDVNQSKDPEGLR;IGS(1)LIDVNQSKDPEGLR;IGS(1)LIDVNQSKDPEGLR 121.25 6.3369e-05 463580000.0 1596260.0 1606030.0 1150070.0 960030.0 1050710.0 1247190.0 994870.0 1033690.0 1245200.0 1196720.0 True False 1507712.2757345804 1528873.9080998225 1224205.352377061 1051270.962556455 1133394.8992778829 1239405.82458836 1095441.168595527 1030104.3706550599 1019103.0689375582 1186117.9918340708 1.2711317812515723 1.2889728666334073 1.0321109373647528 0.8863122975909804 0.9555498753756672 1.0449262494297817 0.92355159953494 0.8684670308914461 0.8591919825461372 1.0 20.17781610177704 -4.862236432052979 3.399090706621579 0.9344946953390784 1.2855947371641556 0.8586733612476413 0.055282107429573984 0.08261676943138656 1.8499574754113501 0.016115521416945215 0.039486441367426135 1.3732941433801553e-05 4.862236432052979 0.35110004182507726 IGS(ph)PGNHK ddPTM_KYSE-520_SHP099_60min_R1 5 IGSPGNHK 8 0 Q6ZV73-2;Q6ZV73;H0YI21 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 IGS(1)PGNHK;IGS(1)PGNHK;IGS(1)PGNHK;IGS(1)PGNHK;IGS(1)PGNHK 103.87 0.0020604 3232420000.0 7160800.0 6028910.0 4921750.0 6039530.0 6724050.0 6797370.0 6846870.0 5799110.0 7270400.0 8213600.0 True False 6763576.149299101 5739272.114021592 5239013.880078429 6613525.115349091 7253194.480388925 6754945.092473621 7539018.438611726 5778994.24093245 5950278.631869284 8140833.89408411 0.830821048223837 0.704998061463001 0.6435475711997497 0.812389148506653 0.8909645590066362 0.8297608304454406 0.9260744705883609 0.7098774297719066 0.7309175828035642 1.0 22.956745151683155 -5.468655144076492 9.98994330131023 0.8378102276663865 0.724753071853426 0.25830812950388704 0.09111234797528857 0.9095746557644232 164.106959351437 0.026024964768571565 0.038513082031633006 3.398950625718339e-06 5.468655144076492 -0.1130571558129605 IGS(ph)PLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 IGSPLSPK 8 0 A0A3B3ISF0;H0Y9K3;D6R9W6;D6RJB0;Q659C4-4;Q659C4-9;Q659C4-2;Q659C4 A0A3B3ISF0 LARP1B La-related protein 1B 2 IGS(1)PLS(1)PK;IGS(1)PLS(1)PK 88.596 0.0049039999999999995 645110000.0 1734050.0 1644070.0 1444190.0 1452980.0 1600860.0 1534090.0 1384350.0 1606790.0 1923110.0 1611160.0 True False 1637858.7897570252 1565086.4094006177 1537284.7981856987 1591070.7823456328 1726838.5743525734 1524515.175268207 1524293.6079540206 1601216.420517606 1573921.7016579723 1596886.3758635123 1.0256576889331637 0.9800862685388628 0.9626763816269744 0.9963581669893484 1.0813784878205814 0.9546798058464424 0.9545410562662999 1.002711554635033 0.9856190931598863 1.0 20.606830232849763 -9.205239713958395 14.328064010354282 0.9999999907598403 0.9930458009756858 0.002351152445548732 0.03615324247247201 0.0 0.0 0.03608503654447961 0.008751906892774282 6.233906526845122e-10 9.205239713958395 -0.006954189784154408 IGTLHT(ph)SPDLK ddPTM_KYSE-520_SHP099_60min_R1 1 IGTLHTSPDLK 11 0 Q9UPZ3-2;Q9UPZ3 Q9UPZ3-2 HPS5 Hermansky-Pudlak syndrome 5 protein 1 IGTLHT(0.958)S(0.042)PDLK 185.9 4.8098e-06 1206800000.0 3488000.0 2876300.0 2506600.0 2592700.0 2758900.0 2909700.0 2729000.0 2676200.0 3340000.0 2880900.0 True False 3294513.6868443857 2738118.2305856803 2668179.446701801 2839109.4284763206 2976009.734006288 2891539.4830015847 3004873.9524733797 2666916.886829773 2733540.1945482194 2855377.4673062814 1.1537927032646855 0.958933892956989 0.9344401842670979 0.9943026661041393 1.0422473974391235 1.0126645307352018 1.0523561199451963 0.9339980151015553 0.957330589684522 1.0 21.44525004493488 -4.25513489969414 24.810938458388307 0.9884009086190848 1.1537927854740013 0.6172366564121521 0.03931019330731896 481.1368150679498 1893431.8840368886 0.01068666420620893 0.09671637331089028 5.557316102030797e-05 4.25513489969414 0.16539187685491652 IGTLHTS(ph)PDLK ddPTM_KYSE-520_SHP099_60min_R1 3 IGTLHTSPDLK 11 0 Q9UPZ3-2;Q9UPZ3 Q9UPZ3-2 HPS5 Hermansky-Pudlak syndrome 5 protein 1 IGTLHT(0.024)S(0.975)PDLK;IGTLHT(0.158)S(0.842)PDLK;IGTLHT(0.057)S(0.943)PDLK 189.3 5.6954e-07 1492360000.0 3857490.0 3745840.0 2971160.0 3233730.0 3220260.0 3582570.0 3085360.0 3323880.0 4190500.0 3259890.0 True False 3643507.339984326 3565884.2237795317 3162685.7276240825 3541062.726943623 3473676.141226975 3560209.851743132 3397258.2990118233 3312350.236079423 3429610.8339084834 3231009.910756046 1.1276682649146554 1.1036438520069802 0.9788536138795143 1.0959615800482103 1.07510538103368 1.1018876295894908 1.0514540013332474 1.0251748919285562 1.0614671352419236 1.0 21.62355374523747 -7.9048635883417875 0.010044111624558368 4.665191500456304e-08 2.088504347660146 0.29296475574091696 0.0387043665463489 1901.0209946953926 13.959310849579728 1466.2028250996862 1434.2271314788916 1.2449055745247227e-08 7.9048635883417875 2.0885043010082307 IGTLQDRPPS(ph)PFREPPGSER ddPTM_KYSE-520_SHP099_60min_R1 6 IGTLQDRPPSPFREPPGSER 20 2 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 IGTLQDRPPS(1)PFREPPGSER;IGTLQDRPPS(1)PFREPPGSER;IGTLQDRPPS(1)PFREPPGSER;IGTLQDRPPS(1)PFREPPGSER;IGTLQDRPPS(1)PFREPPGSER;IGTLQDRPPS(1)PFREPPGSER 240.8 1.785e-26 8446150000.0 2243930.0 2263930.0 2180350.0 1890180.0 2099260.0 2189360.0 1878770.0 2318970.0 2717110.0 2216380.0 True False 2119454.7297364464 2155167.4045717916 2320898.849683346 2069822.1388966606 2264459.8188444814 2175695.392138141 2068694.4066282213 2310926.0343216695 2223751.3167691347 2196744.597517546 0.9648161794191088 0.9810732695131064 1.056517381358808 0.9422224783143588 1.0308252590690141 0.9904180006163705 0.9417091130967027 1.0519775657730788 1.0122939732193301 1.0 21.066935715228365 -7.283959587438335 24.97188376968464 1.0241018185879103 0.9893769707895438 0.15967838678841717 0.03590573259870985 1537.766100709562 1705166.7006974085 0.019004803850574653 0.009139798883074528 5.200443861606251e-08 7.283959587438335 -0.03472484779836649 IGTLQDRPPSPFREPPGS(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 1 IGTLQDRPPSPFREPPGSER 20 2 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 IGTLQDRPPS(0.378)PFREPPGS(0.622)ER 109.03 0.00010914 1223100000.0 400990.0 433980.0 402120.0 347910.0 338960.0 411260.0 338370.0 441600.0 490190.0 389860.0 True False 378746.28534625284 413130.94938273996 428041.2986147488 380975.26179704414 365634.2235814175 408693.1737908489 372575.7417729635 440068.19267021475 401183.85268430895 386406.14370649017 0.9801766651876641 1.0691624760929 1.1077497228923054 0.9859451460648325 0.9462432974646211 1.0576777322186877 0.964207603427672 1.1388747302229378 1.03824398037792 1.0 18.5597585070795 -7.24797214306208 24.997307046116493 1.0664195271395607 1.0192410157998086 0.09938454032262745 0.057663230977094686 1673.3870262586781 3106071.4770191335 0.027678220121435712 0.015891377609555866 5.6497321270991515e-08 7.24797214306208 -0.04717851133975204 IGTSLEWGGT(ph)SEPK ddPTM_KYSE-520_SHP099_60min_R1 2 IGTSLEWGGTSEPK 14 0 A0A0A0MTD9;A0A0A0MTE6;F5H2S8;E9PMT0;A0A0B4J1S7;Q9Y2R2-6;Q9Y2R2-2;Q9Y2R2-3;Q9Y2R2 A0A0A0MTD9 PTPN22 Protein-tyrosine-phosphatase;Tyrosine-protein phosphatase non-receptor type 22 1 IGTSLEWGGT(0.5)S(0.5)EPK;IGTSLEWGGT(0.5)S(0.5)EPK 95.40100000000001 0.0090557 376658000.0 1134170.0 869830.0 933110.0 633400.0 584630.0 618390.0 478900.0 809850.0 1090330.0 715290.0 True False 1071255.329188159 828042.0611585518 993259.7636287872 693598.1455613462 630637.054910326 614530.3986298767 527311.8856135956 807040.8193704108 892353.556982563 708953.0870872 1.5110383870243256 1.1679786381361847 1.4010232577019839 0.978341385621239 0.8895328427179254 0.8668139117000424 0.7437895330706659 1.1383557446462549 1.258691968814017 1.0 19.435330638903157 -5.268325768822948 23.76843243840482 0.9693778104239443 1.3408099589062095 0.5498503043236684 0.15605542896335364 215.40787299586307 743483.3866788148 0.0464271129649566 0.07073177484364723 5.391060817112328e-06 5.268325768822948 0.37143214848226513 IHAESLLLDS(ph)PAVAK ddPTM_KYSE-520_SHP099_60min_R1 9 IHAESLLLDSPAVAK 15 0 Q9H4L5-5;Q9H4L5;Q9H4L5-6;Q9H4L5-2 Q9H4L5-5;Q9H4L5-6 OSBPL3 Oxysterol-binding protein-related protein 3 1 IHAESLLLDS(1)PAVAK;IHAESLLLDS(1)PAVAK;IHAESLLLDS(1)PAVAK;IHAESLLLDS(1)PAVAK;IHAESLLLDS(1)PAVAK;IHAESLLLDS(1)PAVAK;IHAESLLLDS(1)PAVAK;IHAESLLLDS(1)PAVAK;IHAESLLLDS(1)PAVAK 207.92 3.6075e-14 8224800000.0 3693170.0 4484120.0 4004630.0 5802210.0 4020328.0 4036150.0 3987576.0 3903950.0 4966690.0 3884261.0 True False 3488302.4979481325 4268696.144398654 4262774.857434553 6353650.293901958 4336704.941062754 4010958.89071618 4390679.097071445 3890408.1086387783 4064864.296066077 3849849.469449328 0.9060880238642396 1.1087955979248292 1.1072575411745356 1.6503633049348205 1.1264609111283161 1.041848239144243 1.1404807205876222 1.0105351233889288 1.055850190591349 1.0 21.876370606320126 -5.99689407497893 24.997711485703785 1.0591926180047508 1.2068993596049538 0.12257555789003283 0.1787432917018004 216.67916331762427 1743891.7326840141 0.05885053623016783 0.06638560804454738 1.0071772908224062e-06 5.99689407497893 0.14770674160020292 IHDLEDDLEMS(ph)S(ph)DAS(ph)DAS(ph)GEEGGR ddPTM_KYSE-520_SHP099_60min_R1 2 IHDLEDDLEMSSDASDASGEEGGR 24 0 P35269;M0QXD6;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 4 IHDLEDDLEMS(1)S(1)DAS(1)DAS(1)GEEGGR;IHDLEDDLEMS(1)S(1)DAS(1)DAS(1)GEEGGR 69.492 0.0031322 107230000.0 77587.0 86027.0 65935.0 74061.0 79892.0 92406.0 77964.0 80934.0 100815.0 78858.0 True False 73283.0944441501 81894.1337908405 70185.27559973011 81099.73517274845 86179.04587670101 91829.25987773476 85845.36197531491 80653.2588441376 82509.53733933506 78159.37947059567 0.9376110063888101 1.0477838276805906 0.8979763666897395 1.0376199980356673 1.1026065772326459 1.1748975043012186 1.0983373020203004 1.031907614804953 1.055657528222521 1.0 16.254131392937527 -5.500141018516525 6.657230085386922 1.0837047880956254 0.9690519558714301 0.456120265458154 0.05622638274494683 0.16187671873170398 28.63571773073313 0.01650976817324637 0.023525327549783984 3.161251012741366e-06 5.500141018516525 -0.11465283222419531 IHDLEDDLEMS(ph)S(ph)DAS(ph)DAS(ph)GEEGGRVPK ddPTM_KYSE-520_SHP099_60min_R1 6 IHDLEDDLEMSSDASDASGEEGGRVPK 27 1 P35269;M0QXD6;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 4 IHDLEDDLEMS(1)S(1)DAS(1)DAS(1)GEEGGRVPK;IHDLEDDLEMS(1)S(1)DAS(1)DAS(1)GEEGGRVPK;IHDLEDDLEMS(1)S(1)DAS(1)DAS(1)GEEGGRVPK;IHDLEDDLEMS(1)S(1)DAS(1)DAS(1)GEEGGRVPK;IHDLEDDLEMS(1)S(1)DAS(1)DAS(1)GEEGGRVPK;IHDLEDDLEMS(1)S(1)DAS(1)DAS(1)GEEGGRVPK 149.0 9.364799999999999e-07 4320820000.0 3989380.0 3944510.0 3788410.0 3783970.0 3279020.0 3602550.0 3248490.0 3776200.0 4585040.0 3543180.0 True False 3768081.1387681332 3755009.818769784 4032616.970270321 4143597.371107934 3537060.218928306 3580065.149151927 3576879.071407199 3763101.2435717033 3752512.3154525105 3511790.1817523288 1.07298014509737 1.0692580206759654 1.148308059867662 1.1799102898113187 1.0071957707801802 1.0194416419734764 1.0185343902358062 1.0715620947758258 1.0685468439860109 1.0 21.7437752203512 -5.778330168402696 24.99999853042642 1.033269010649541 1.1163525606087652 0.5615407082047428 0.03750419931739093 206.4052157417817 305498.3390082472 0.012756394214027179 0.014502129390035031 1.6659801848101393e-06 5.778330168402696 0.08308354995922418 IHDPQLLTER ddPTM_KYSE-520_SHP099_60min_R1 1 IHDPQLLTER 10 0 P14868;P14868-2;H7BZ35 P14868 DARS Aspartate--tRNA ligase, cytoplasmic 0 138.99 4.2569e-05 0.0 407710.0 398460.0 279120.0 302300.0 432820.0 388390.0 304360.0 379100.0 410800.0 324200.0 False True 385093.51355026494 379317.3834993464 297112.5218077901 331030.50111019105 466880.4715910699 385965.9139440449 335127.6790673494 377784.99058260524 336209.07542527193 321327.8402237836 1.1984442844481595 1.180468468699061 0.9246398369990936 1.0301955189430525 1.4529723638820666 1.2011592698449196 1.0429462907227556 1.1756995295505765 1.0463116896162017 1.0 18.29368645746453 -10.285052656045957 4.26520428747529 0.9998748784441338 1.1401939128474916 0.08625534480874986 0.1358885965646138 0.00017035754051482398 2.855566344200576e-05 0.1386348427787722 0.03359395767860563 5.187371408176233e-11 10.285052656045957 0.1403190344033578 IHEDIFDIIDR ddPTM_KYSE-520_SHP099_60min_R1 7 IHEDIFDIIDR 11 0 K7EKE5;K7EIS0;Q9NRH3;P23258 K7EKE5 TUBG1;TUBG2 Tubulin gamma chain;Tubulin gamma-2 chain;Tubulin gamma-1 chain 0 ;;;;;; 199.82 6.263499999999999e-07 1054735000.0 804727.0 749051.0 515199.0 502471.0 857831.0 804509.0 534659.0 562201.0 628195.0 614647.0 False True 760087.1891264961 713065.4656115273 548409.5518875457 550225.6927665846 925337.4193092713 799487.7609135389 588707.5494889945 560250.8559497002 514130.62350725173 609201.7057681296 1.2476773816122497 1.1704915775185465 0.9002101384402195 0.9031913199796718 1.518934386670065 1.3123531226910825 0.9663589972170311 0.9196475496457971 0.843941536340571 1.0 19.21656045582173 -6.912211190046637 7.039927708825806 0.917547238774729 1.1654802304913492 0.31852130002164303 0.1745852283297204 0.30837398658324033 20.73525316012055 0.08168903665365163 0.054868387414084584 1.2240208339304705e-07 6.912211190046637 0.2479329917166202 IHFPLATYAPVISAEK ddPTM_KYSE-520_SHP099_60min_R1 4 IHFPLATYAPVISAEK 16 0 Q9BQE3;F5H5D3;A0A1W2PQM2;F8VVB9;P68363;P68366-2;P68366;P68363-2;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2;C9JDS9 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1B;TUBA4A;TUBA1A;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain 0 ;;; 224.16 5.811e-18 2135616000.0 1715912.0 1844297.0 1367751.0 1422971.0 1927931.0 1863374.0 1229899.0 1344440.0 1387697.0 1047757.0 False True 1620726.940774232 1755694.203773766 1455918.417938977 1558209.73600817 2079648.2012731459 1851743.991682512 1354229.1935775208 1339776.4514346535 1135726.2057946064 1038474.6881226101 1.5606802547149583 1.6906470844732575 1.4019777608359776 1.5004792642805331 2.002598835637299 1.783138301647157 1.3040560439905786 1.2901387648231917 1.0936484237741133 1.0 19.986034621553898 -6.937097761009132 3.6379653703422328 1.1614224096492936 1.6541829625698836 0.6681017300583072 0.1695437904048039 0.16272460264375796 4.3593971287284905 0.08550706058178788 0.053870838723737983 1.1558520270978413e-07 6.937097761009132 0.49276055292059007 IHFS(ph)PSEPK ddPTM_KYSE-520_SHP099_60min_R1 3 IHFSPSEPK 9 0 Q8IZT6-2;Q8IZT6 Q8IZT6-2 ASPM Abnormal spindle-like microcephaly-associated protein 1 IHFS(0.982)PS(0.018)EPK;IHFS(0.991)PS(0.009)EPK;IHFS(0.994)PS(0.006)EPK 159.09 0.00010006 716430000.0 1388370.0 1388110.0 1190380.0 1337340.0 1264290.0 1236870.0 1226290.0 1245660.0 1427610.0 1212910.0 True False 1311354.3484530216 1321423.112004413 1267113.799475341 1464440.3915140675 1363782.430173916 1229150.2355363697 1350255.3606370748 1241339.096199231 1168392.0111194565 1202164.5610297003 1.0908276545182767 1.0992031830255944 1.0540269115818963 1.218169657454981 1.1344390563350026 1.0224475711408054 1.123186795225879 1.0325866661183025 0.9719068827970471 1.0 20.197202965482617 -7.4522434655693806 3.1739849605770654 0.9869749451987604 1.1060865365276589 0.49936642863477465 0.04924575753976755 0.22628282076357137 4.356855431903984 0.03579141555122391 0.01388641107778855 3.529852307271376e-08 7.4522434655693806 0.11911159132889848 IHGVGFK ddPTM_KYSE-520_SHP099_60min_R1 5 IHGVGFK 7 0 H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899;P62899-2;B8ZZK4 H7C2W9 RPL31 60S ribosomal protein L31 0 ;;;; 118.06 0.0044542 1321620000.0 5305720.0 4468010.0 3194800.0 3151660.0 4717360.0 4586190.0 3499730.0 4205380.0 3751540.0 3731950.0 False True 5011401.134909395 4253360.092980262 3400741.919860734 3451192.818818865 5088589.393893185 4557565.887049193 3853516.8624733104 4190792.5183230718 3070354.904627374 3698887.826413168 1.3548399870695669 1.1499024281319632 0.9193957966436772 0.9330352745964469 1.3757079513350958 1.2321449313775727 1.0418041971848837 1.1329871883103053 0.8300751600798648 1.0 21.818660118844935 -7.746628318347545 24.661383551052744 0.915037633351206 1.135714842164895 0.2669700708698972 0.15041589021769153 255.09892684816407 424761.57327230653 0.10870670445068169 0.040692105318885154 1.7921389617394682e-08 7.746628318347545 0.22067720881368902 IHHCMRTVGLAER ddPTM_KYSE-520_SHP099_60min_R1 1 IHHCMRTVGLAER 13 1 Q709F0-3;Q709F0 Q709F0-3 ACAD11 Acyl-CoA dehydrogenase family member 11 0 48.568000000000005 0.058571000000000005 20944000.0 23993.0 26236.0 13176.0 18066.0 12071.0 25701.0 13032.0 24193.0 21467.0 9403.1 False True 22662.060461140285 24975.583178961126 14025.346042345389 19782.98720825903 13020.919025405035 25540.590525698113 14349.40174006342 24109.08012968865 17569.13393903194 9319.795849501103 2.4316048148579785 2.6798423036592687 1.5048984193249446 2.1226846089464537 1.397124919437163 2.740466737483882 1.539669105609385 2.586867836915036 1.8851415012456987 1.0 13.18608263759549 IHIDPEIQDGS(ph)PTTSR ddPTM_KYSE-520_SHP099_60min_R1 13 IHIDPEIQDGSPTTSR 16 0 P50479;P50479-2;C9J542 P50479 PDLIM4 PDZ and LIM domain protein 4 1 IHIDPEIQDGS(0.645)PT(0.173)T(0.173)S(0.008)R;IHIDPEIQDGS(0.888)PT(0.076)T(0.022)S(0.014)R;IHIDPEIQDGS(0.942)PT(0.041)T(0.013)S(0.004)R;IHIDPEIQDGS(0.985)PT(0.011)T(0.003)S(0.001)R;IHIDPEIQDGS(0.996)PT(0.004)TSR;IHIDPEIQDGS(0.999)PT(0.001)TSR;IHIDPEIQDGS(0.868)PT(0.096)T(0.032)S(0.004)R;IHIDPEIQDGS(0.955)PT(0.033)T(0.009)S(0.003)R;IHIDPEIQDGS(0.974)PT(0.024)T(0.001)SR;IHIDPEIQDGS(0.919)PT(0.061)T(0.016)S(0.004)R;IHIDPEIQDGS(0.949)PT(0.038)T(0.01)S(0.003)R;IHIDPEIQDGS(0.948)PT(0.039)T(0.01)S(0.003)R;IHIDPEIQDGS(0.754)PT(0.187)T(0.047)S(0.012)R 245.1 2.0375e-23 90686740000.0 27976860.0 27648300.0 26081080.0 24114020.0 23901900.0 23334880.0 22317870.0 22353090.0 28198610.0 21183720.0 True False 26424927.805312242 26320034.167055625 27762308.14800342 26405809.2106555 25782843.546792172 23189238.358285785 24573978.101021264 22275552.3480404 23078453.253110588 20996048.721484754 1.2585667025182812 1.2535708273587194 1.322263465677469 1.2576561219176 1.2279855075973989 1.1044572560244057 1.1704096531208417 1.0609402103952235 1.099180782024713 1.0 24.323614514661152 -6.667123000009552 0.5938726398068462 1.0223699390329668 1.2929320661724 0.8618174341175143 0.036960572939621336 0.2883649394773138 0.2106741558769468 0.03350793433225672 0.026892514768514394 2.1521721145437075e-07 6.667123000009552 0.2705621271394332 IHLDEK ddPTM_KYSE-520_SHP099_60min_R1 8 IHLDEK 6 0 P37837 P37837 TALDO1 Transaldolase 0 ;;;;;;; 166.13 0.0087143 10857100000.0 29536980.0 28052440.0 19512840.0 17760610.0 27966030.0 28966960.0 20968620.0 25161860.0 24573960.0 24170190.0 False True 27898504.838890165 26704758.67482908 20770668.88804787 19448573.034477886 30166797.45605562 28786166.45789175 23088332.743610255 25074579.3804823 20111948.32311982 23956060.920723274 1.1645697901342564 1.1147391369224662 0.8670318946334007 0.8118435288187896 1.259255332330522 1.2016235287242143 0.9637783448629325 1.046690416402784 0.8395348630008662 1.0 24.51388737044635 -7.727847452199649 19.68527557394831 0.9197697722912433 1.0502297508893916 0.12814236900170817 0.13949811109687513 38.17851637259235 22373.666476596394 0.1011857614248286 0.03821902367578657 1.871339340910307e-08 7.727847452199649 0.13045997859814829 IHLGS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 IHLGSSPK 8 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 IHLGS(0.5)S(0.5)PK 96.34200000000001 0.0072383 0.0 321300.0 365920.0 336580.0 460130.0 349590.0 331080.0 316600.0 299070.0 406830.0 315610.0 True False 303476.8485043296 348340.6539428819 358276.4853470409 503860.6168568709 377100.74410499085 329013.60691211006 348605.01771823806 298032.5959734627 332959.9273497167 312813.9409408643 0.9701512905452643 1.1135713865410293 1.1453341378246662 1.6107358110108105 1.2055113111991373 1.0517869054125955 1.114416501610265 0.9527471668208164 1.064402457090814 1.0 18.254945284006865 -6.261169107104219 5.365346440198164 1.0374997065870466 1.2233150306100817 0.22909799959930555 0.15739133445453893 0.28330701057216007 29.10230864064742 0.05895791747852601 0.055279451425065 5.48063516478115e-07 6.261169107104219 0.18581532402303513 IHLGSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 IHLGSSPK 8 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 IHLGS(0.002)S(0.998)PK;IHLGS(0.092)S(0.908)PK;IHLGS(0.453)S(0.547)PK;IHLGS(0.001)S(0.999)PK;IHLGS(0.026)S(0.974)PK;IHLGS(0.061)S(0.939)PK;IHLGS(0.067)S(0.933)PK;IHLGSS(1)PK;IHLGSS(1)PK 152.17 0.00024835 17730470000.0 27313920.0 32679750.0 28683860.0 46232890.0 30451230.0 28143440.0 28144230.0 28022700.0 35114850.0 27785750.0 True False 25798762.40865039 31109765.756695177 30532867.511398707 50626849.965174794 32847568.557201877 27967786.351680987 30989323.42961515 27925495.794247326 28738878.413332794 27539589.871986404 0.9367881848848154 1.129637946727028 1.1086899860646473 1.8383298444350844 1.1927399322171754 1.0155483971142993 1.1252645218634085 1.0140127694005157 1.0435477996194242 1.0 24.71500373878764 -6.132564503222044 5.52726330306295 1.0475011744827718 1.265611344669945 0.17173376396132967 0.221679244772536 0.4458173680424401 18.21996515530154 0.07855272697772774 0.07880817825482335 7.369457129680697e-07 6.132564503222044 0.21811017018717327 IHLPLNYPPGS(ph)PDLGR ddPTM_KYSE-520_SHP099_60min_R1 2 IHLPLNYPPGSPDLGR 16 0 Q08174;Q08174-2 Q08174 PCDH1 Protocadherin-1 1 IHLPLNYPPGS(1)PDLGR;IHLPLNYPPGS(1)PDLGR 116.39 0.00011753 261697000.0 157473.0 169853.0 137861.0 177577.0 187672.0 183315.0 166681.0 213848.0 295890.0 161172.0 True False 148737.6587753571 161693.00692544915 146747.74064539914 194453.86468952792 202440.71869238763 182170.86308775342 183530.7421297966 213106.2112004986 242163.83477990245 159744.14146991872 0.9310993029648337 1.012199918179143 0.9186423946134706 1.2172832311734285 1.267281020947545 1.140391512398956 1.14890436945606 1.3340471158413558 1.5159481440231979 1.0 17.28540349651812 -5.294745961351653 6.81083509324861 1.2408560228831855 0.9596912205549893 0.49141721062105137 0.12936927055112826 0.17344308987277374 27.34071437485971 0.03712323503349468 0.056377202705161805 5.072873570143772e-06 5.294745961351653 -0.2811648023281962 IHMS(ph)GPK ddPTM_KYSE-520_SHP099_60min_R1 4 IHMSGPK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IHMS(1)GPK;IHMS(1)GPK;IHMS(1)GPK;IHMS(1)GPK 116.52 0.0017892 4491300000.0 9132300.0 9497600.0 9169000.0 9510500.0 9167400.0 7496220.0 7671500.0 8775400.0 9337300.0 8377300.0 True False 8625713.114211278 9041321.039811768 9760048.410918709 10414375.060563898 9888822.224629119 7449433.310398373 8447010.086624969 8744960.185593767 7641881.694178174 8303083.639440783 1.0388565849485076 1.0889112325527177 1.1754727321494323 1.2542779902991934 1.190981887458758 0.897188759488408 1.0173340957930996 1.0532183662529917 0.9203667006168877 1.0 22.9852158003774 -6.25116638853884 24.9646174855347 0.9834297629829829 1.1535646295509951 0.6105213511181167 0.0686077198956003 530.4521922773664 1289063.8652351177 0.024692507484711076 0.024432126264422056 5.608330663883287e-07 6.25116638853884 0.17013486656801224 IHNVGS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 5 IHNVGSPLK 9 0 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1;P52701-4 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 IHNVGS(1)PLK;IHNVGS(1)PLK;IHNVGS(1)PLK;IHNVGS(1)PLK;IHNVGS(1)PLK 145.6 0.00062264 3517770000.0 6955880.0 6518320.0 6023270.0 5632350.0 6400650.0 6272860.0 5837060.0 6192660.0 6864910.0 6271300.0 True False 6570023.470196989 6205170.123002216 6411539.621772745 6167646.850572223 6904344.740283209 6233708.7539407285 6427126.989015853 6171179.107837709 5618415.394298211 6215741.160997575 1.0569975969112837 0.9982993117439172 1.0315004205779614 0.992262497877625 1.110783824720127 1.0028906597745568 1.0340081452143919 0.9928307739969155 0.9039011195563526 1.0 22.567494996892147 -7.513547174274458 4.902662356474552 0.9498775861514218 1.0306054466818952 0.40792419189185947 0.03885874863369155 0.16422320213881758 11.337114041429531 0.0240582006593288 0.009692187258780247 3.065157715386698e-08 7.513547174274458 0.08072786053047343 IHPMAYQLQLQAASNFKS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 11 IHPMAYQLQLQAASNFKSPVK 21 1 Q5SRQ6;P67870 Q5SRQ6 CSNK2B Casein kinase II subunit beta 1 IHPMAYQLQLQAAS(0.17)NFKS(0.83)PVK;IHPMAYQLQLQAASNFKS(1)PVK;IHPMAYQLQLQAASNFKS(1)PVK;IHPMAYQLQLQAAS(0.013)NFKS(0.987)PVK;IHPMAYQLQLQAASNFKS(1)PVK;IHPMAYQLQLQAAS(0.016)NFKS(0.984)PVK;IHPMAYQLQLQAAS(0.01)NFKS(0.99)PVK;IHPMAYQLQLQAAS(0.001)NFKS(0.999)PVK;IHPMAYQLQLQAASNFKS(1)PVK;IHPMAYQLQLQAASNFKS(1)PVK;IHPMAYQLQLQAASNFKS(1)PVK 323.41 3.1800999999999994e-54 42511990000.0 20561620.0 26416350.0 30956460.0 23302973.0 25802360.0 29084230.0 20220176.0 20036110.0 27675820.0 15866031.0 True False 19421025.950026732 25147268.894250248 32951962.943687253 25517680.547625687 27832858.936653927 28902704.53232267 22264228.719980698 19966609.410873223 22650588.738647174 15725470.308925329 1.2350044589129974 1.5991425630034972 2.095451665123469 1.6226974485553274 1.7699221956405837 1.8379548569633761 1.4158068587204133 1.2696987128925958 1.440375918409979 1.0 23.90659982931024 -7.528962781707047 0.916249511653731 1.0704017343641203 1.705810864572172 0.4517612237152089 0.22728233639314005 0.5090469977877925 0.8181610157853914 0.21934859908241966 0.08351136122198952 2.9582659740139194e-08 7.528962781707047 0.6354091302080516 IHPQTIIAGWR ddPTM_KYSE-520_SHP099_60min_R1 2 IHPQTIIAGWR 11 0 P78371-2;P78371;F8VQ14;F5GWF6 P78371-2 CCT2 T-complex protein 1 subunit beta 0 ; 170.52 2.102e-05 962920000.0 237660.0 239810.0 180296.0 168222.0 275660.0 209171.0 178087.0 193605.0 163517.0 170062.0 False True 224476.5260365357 228289.1676378513 191918.16864379958 184209.76830221165 297352.87370915036 207865.48620095706 196089.7719216296 192933.42944274662 133826.43472812604 168555.38298623412 1.3317671738485424 1.354386692334208 1.1386059895783542 1.0928738378960938 1.7641256448833502 1.233217726531661 1.1633551444491346 1.1446292964639608 0.7939612034761039 1.0 17.36286317641652 -7.326251661299147 1.6544271918324598 0.9127562542062228 1.3168425745611343 0.4293990960171048 0.18270733733209352 0.3991796888834096 1.960172135601215 0.15227994249597052 0.05643766716602158 4.717895733996634e-08 7.326251661299147 0.40408632035491154 IHRAS(ph)DPGLPAEEPK ddPTM_KYSE-520_SHP099_60min_R1 17 IHRASDPGLPAEEPK 15 1 F8VPD4;P27708 F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK;IHRAS(1)DPGLPAEEPK 194.58 3.7786e-11 154505650000.0 82827350.0 80587840.0 78897200.0 76909340.0 78157810.0 79085100.0 75657270.0 76551850.0 94281010.0 72802970.0 True False 78232751.78327122 76716279.20158604 83983039.75198337 84218780.54996373 84308384.98989238 78591500.55577165 83305445.19539961 76286309.49968614 77161955.21485105 72157992.32565355 1.0841869245779718 1.0631709215988252 1.1638771679367497 1.1671441767653274 1.1683859579879017 1.089158636801912 1.154486738204091 1.0572121956414922 1.0693473131377367 1.0 26.104655862808745 -7.7880835780984015 1.1860722830570958 1.0042920453873065 1.1284876844389233 0.5171597242868371 0.03850067346936434 0.375933441408104 1.1080193626587733 0.038624556742288776 0.012539079955952895 1.6289825118199616e-08 7.7880835780984015 0.12419563905161679 IHRAS(ph)DPGLPAEEPKEK ddPTM_KYSE-520_SHP099_60min_R1 4 IHRASDPGLPAEEPKEK 17 2 F8VPD4;P27708 F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK;IHRAS(1)DPGLPAEEPKEK 107.47 0.00025151 4378800000.0 3213780.0 4291520.0 4579350.0 2559920.0 3025580.0 2718570.0 2047330.0 2088060.0 5142680.0 2285190.0 True False 3035505.2168884 4085348.937497157 4874542.228219062 2803214.027131989 3263675.9328046534 2701602.3962276597 2254294.096415291 2080817.0072168661 4208898.948412949 2264944.9944509184 1.3402114507528184 1.803729868719197 2.1521680394718716 1.2376521434294527 1.440951520147558 1.1927894067390359 0.9952975025611122 0.9187053161621306 1.8582786596251517 1.0 21.111044583305848 -5.305983436066772 17.91387316909248 1.2282759372975416 1.7692017788561865 0.3766883587164699 0.3126647508816628 17.91870274198939 7205.756512082964 0.08818090125465364 0.13080586821043585 4.943295402895956e-06 5.305983436066772 0.5409258415586449 IHS(ph)DERPYK ddPTM_KYSE-520_SHP099_60min_R1 2 IHSDERPYK 9 1 Q9NTW7-2;Q9NTW7;H0Y669;A2A2N5;Q9NTW7-3 Q9NTW7-2 ZFP64 Zinc finger protein 64 homolog, isoforms 3 and 4 1 IHS(1)DERPYK;IHS(1)DERPYK 113.38 0.00058111 720220000.0 1666130.0 1502020.0 1410720.0 1448750.0 1538100.0 1532310.0 1449910.0 1588280.0 1803750.0 1481140.0 True False 1573706.447552187 1429860.7046220177 1501657.2684318076 1586438.764417429 1659139.719408124 1522746.284908467 1596481.052557962 1582770.627387337 1476234.4688372328 1468018.2519094818 1.0719937885685238 0.9740074435465419 1.0229145764901566 1.0806669211053168 1.1301901166760335 1.0372802129181973 1.0875076317895815 1.078168221225175 1.0055968084300477 1.0 20.48543847468214 -5.202410508081157 7.017361507862292 1.0662747285313081 1.017653340616152 0.11829143886004667 0.04321737702052379 0.41839457562599863 42.41201424287491 0.01144539112203982 0.019895783466739595 6.274649798277497e-06 5.202410508081157 -0.04862138791515602 IHS(ph)GDKPYECNVCGK ddPTM_KYSE-520_SHP099_60min_R1 1 IHSGDKPYECNVCGK 15 1 Q15072 Q15072 ZNF146 Zinc finger protein OZF 1 IHS(1)GDKPYECNVCGK 113.47 0.00011388 671130000.0 281950.0 269950.0 267940.0 308110.0 316420.0 255270.0 247420.0 292880.0 362970.0 277000.0 True False 266309.67144660937 256981.1967967894 285211.84111915756 337392.68176335096 341320.45381647383 253676.76524240142 272431.6281865017 291864.0676387058 297063.79772909236 274545.99550273875 0.970000203277242 0.9360223824289066 1.0388490300027429 1.2289113201069628 1.243217746416079 0.9239863971713652 0.992298677267664 1.0630789464047903 1.0820183233236378 1.0 18.066688342883538 -4.896491283800522 5.080063094420225 1.079884405685289 0.9549713669555938 0.20911494582394852 0.09399705706413344 0.3338246165349822 13.616646864353893 0.027387467430624094 0.05951187897563912 1.269137615516266e-05 4.896491283800522 -0.12491303872969517 IHS(ph)PIIR ddPTM_KYSE-520_SHP099_60min_R1 11 IHSPIIR 7 0 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR;IHS(1)PIIR 122.44 0.0016022999999999999 16521560000.0 5061980.0 4785810.0 4360630.0 4252120.0 4747500.0 4667010.0 4434730.0 4971610.0 6077630.0 4794450.0 True False 4781181.878593046 4555892.503952733 4641723.187054683 4656240.206353504 5121101.24042005 4637881.459450541 4883035.787193943 4954364.645292502 4974085.596584457 4751974.903025661 1.0061462815278737 0.9587366509557788 0.9767987587853677 0.9798537032232219 1.077678511550926 0.9759903101545266 1.0275802980535174 1.0425906589148812 1.0467407126702994 1.0 22.18009578606554 -5.58329918329448 24.9999776405207 1.0279744697361342 0.978369364663151 0.41837463036523503 0.02771433414390648 66.38741159816836 27468.339980691333 0.00794030717107277 0.010250893593451322 2.610362469211432e-06 5.58329918329448 -0.0496051050729831 IHS(ph)PIPDMSK ddPTM_KYSE-520_SHP099_60min_R1 8 IHSPIPDMSK 10 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 IHS(1)PIPDMSK;IHS(1)PIPDMSK;IHS(1)PIPDMSK;IHS(1)PIPDMSK;IHS(1)PIPDMSK;IHS(1)PIPDMSK;IHS(1)PIPDMSK;IHS(1)PIPDMSK 137.84 0.00017522 20114320000.0 29394590.0 27733320.0 25462340.0 25524560.0 26978790.0 29693880.0 28974280.0 33252340.0 38554820.0 29222930.0 True False 27764013.496037588 26400969.67863799 27103683.177584436 27950406.508161172 29101867.28468289 29508549.480534486 31903282.984122526 33136995.393694505 31554236.57591966 28964037.5752955 0.9585684807880012 0.9115086116707828 0.9357701980300623 0.9650038063754312 1.004758649723095 1.0187995856524996 1.1014791325686588 1.1440737606955143 1.0894281052457078 1.0 24.78775939176513 -6.190275017186393 1.2474251113206845 1.0948093225848152 0.9350481533037077 0.722531191841242 0.038222108667930146 0.21547865342683875 0.6882059208521558 0.018103760318238262 0.01736623894885432 6.452454976166093e-07 6.190275017186393 -0.1597611692811075 IHT(ph)GDRPYK ddPTM_KYSE-520_SHP099_60min_R1 1 IHTGDRPYK 9 1 Q8TF68-3;Q8TF68-2;Q8TF68;Q5T0B9;O43309 Q8TF68-3 ZNF384;ZNF362;ZSCAN12 Zinc finger protein 384;Zinc finger protein 362;Zinc finger and SCAN domain-containing protein 12 1 IHT(1)GDRPYK 90.65299999999999 0.0047332 0.0 286310.0 271040.0 279070.0 255900.0 305970.0 294310.0 271940.0 263810.0 377650.0 318110.0 True False 270427.81355516496 258018.8315606656 297059.2987277878 280220.65906085976 330048.09826884046 292473.1021212489 299430.34907864087 262894.9046837168 309078.27978177747 315291.79288583517 0.8577064790680577 0.8183493429976223 0.9421726331942639 0.8887661061394186 1.046802059920248 0.9276267531237365 0.9496928110243021 0.8338146143211191 0.9802928168627987 1.0 18.26632809128011 -4.767822736022309 24.9708127902922 0.9412216453632728 0.8380279014543977 0.3704977302095618 0.05607897189324623 142.50259255583808 557458.6335422929 0.014479983901834987 0.03136194703245474 1.7067788949263024e-05 4.767822736022309 -0.10319374390887515 IHT(ph)GEKPYTCPDCGR ddPTM_KYSE-520_SHP099_60min_R1 1 IHTGEKPYTCPDCGR 15 1 Q6DD87 Q6DD87 ZNF787 Zinc finger protein 787 1 IHT(0.999)GEKPYT(0.001)CPDCGR 78.67399999999999 0.013669999999999998 0.0 139750.0 117170.0 126000.0 119830.0 106310.0 126000.0 133550.0 116430.0 135530.0 131600.0 True False 131997.78891528162 111540.97732424442 134122.161607128 131218.60717179693 114675.99217884243 125213.58726267309 147050.53732239653 116026.13150496615 110921.16843326946 130434.1263832506 1.011988139725309 0.8551517951406903 1.0282750789700614 1.0060143829709207 0.879187029948692 0.9599756653773402 1.1273931247894622 0.8895381501927657 0.8503999030694865 1.0 16.99296185568223 IHT(ph)GERPNTCSECGK ddPTM_KYSE-520_SHP099_60min_R1 1 IHTGERPNTCSECGK 15 1 Q9UEG4 Q9UEG4 ZNF629 Zinc finger protein 629 1 IHT(1)GERPNTCSECGK 117.26 0.00051202 0.0 150600.0 153030.0 133950.0 124330.0 146250.0 127960.0 126710.0 129380.0 153830.0 108640.0 True False 142245.91778634285 145678.20909728692 142584.63132757763 136146.28581882233 157759.04295132836 127161.35417564817 139519.08337042932 128931.2109775189 125898.34973872834 107677.53412064102 1.321036174797351 1.3529118240585845 1.3241818034932615 1.264388964055261 1.4651063867656593 1.1809460089713573 1.2957120954693602 1.1973826483903822 1.169216501537571 1.0 16.716357751304358 -7.907014683976887 0.5628955055650682 0.995465460059624 1.3409941807544812 0.7177678357071029 0.06414077443034202 0.4457523616804025 0.34547859331689834 0.06530693330599019 0.030671414499894266 1.2387547021553982e-08 7.907014683976887 0.3455287206948572 IHTDFEK ddPTM_KYSE-520_SHP099_60min_R1 6 IHTDFEK 7 0 J3KQ32;Q9NTK5;Q9NTK5-2 J3KQ32 OLA1 Obg-like ATPase 1 0 ;;;;; 176.66 0.00063944 7075530000.0 17929360.0 16754250.0 11520000.0 10454770.0 16585460.0 16604840.0 12077790.0 14808960.0 14140220.0 14985400.0 False True 16934782.65950696 15949350.68135805 12262597.632651715 11448388.197458781 17890641.343641292 16501203.034307344 13298730.881071264 14757591.17419724 11572712.493938526 14852641.014464777 1.1401866269449599 1.0738393707775744 0.825617317533585 0.7707981487137108 1.2045427696136903 1.1109945374857613 0.8953781935562718 0.9936004754861463 0.7791686665467795 1.0 23.824216150099446 -6.802201292550315 24.98839691285226 0.9165034483274294 1.0114881345482145 0.11663906680042324 0.13868129543604246 420.10132936348674 257532.47258691947 0.0626103587500825 0.04221245278315727 1.576880226992836e-07 6.802201292550315 0.09498468622078515 IIAEGANGPTT(ph)PEADKIFLER ddPTM_KYSE-520_SHP099_60min_R1 3 IIAEGANGPTTPEADKIFLER 21 1 P00367;P49448;P00367-2;P00367-3 P00367 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial 1 IIAEGANGPT(0.044)T(0.956)PEADKIFLER;IIAEGANGPT(0.26)T(0.74)PEADKIFLER;IIAEGANGPT(0.248)T(0.752)PEADKIFLER 150.94 1.9764e-06 1937570000.0 456210.0 1116410.0 648330.0 575190.0 767220.0 727230.0 631790.0 727250.0 1276450.0 604910.0 True False 430903.1218679122 1062775.9878344254 690122.3891646778 629855.88466282 827595.8491153372 722691.0878177286 695657.4988762025 724727.3394914264 1044678.8566859519 599550.9680128581 0.7187097425529817 1.7726199181311855 1.151065423932194 1.0505460223847258 1.3803594577760543 1.20538724207719 1.1602975159591158 1.2087835366081567 1.742435443225817 1.0 19.19352287724036 IIALDGDTK ddPTM_KYSE-520_SHP099_60min_R1 2 IIALDGDTK 9 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 117.81 0.0060796999999999995 464980000.0 1362480.0 1692490.0 1316780.0 978940.0 1479980.0 1655810.0 1298570.0 1554340.0 1731500.0 1651660.0 False True 1286900.5183634558 1611180.2399207167 1401661.745722491 1071978.163270956 1596446.0060656888 1645475.475598468 1429842.1284218954 1548948.357325682 1417103.2475629472 1637027.577372037 0.7861202438808945 0.9842108112235874 0.8562236611631278 0.6548320737466319 0.9752102091209147 1.0051605106372077 0.8734380215617736 0.9461956406453756 0.8656563072919394 1.0 20.64264719498643 IIAPPER ddPTM_KYSE-520_SHP099_60min_R1 5 IIAPPER 7 0 P60709;P63267-2;A0A2R8YFE2;P63261;P68133;P68032;P63267;P62736;A6NL76;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 0 ;;;; 121.14 0.018726 6337940000.0 5202290.0 6543970.0 4716280.0 3268200.0 5747020.0 6368200.0 4551630.0 5169600.0 5173550.0 6047110.0 False True 4913708.603191993 6229587.85850077 5020298.95511481 3578808.7453798433 6199277.777929187 6328453.701636157 5011753.180028001 5151667.864193705 4234163.734582317 5993537.309980385 0.8198344898945952 1.0393841793772296 0.8376187041924396 0.5971112817501683 1.034327052174382 1.055879587351208 0.8361928725599946 0.8595371310386595 0.7064548889237121 1.0 22.5149762840796 -11.511152201042947 2.2252643517853388 2.7689367389314845 0.8711491683931207 0.07551699287734714 0.14013943760125758 10600586.889283363 708909.3946574839 95928539.01073973 0.03654980160418918 3.082107618302823e-12 11.511152201042947 -1.8977875705383638 IIAPPERK ddPTM_KYSE-520_SHP099_60min_R1 3 IIAPPERK 8 1 P60709;P63267-2;A0A2R8YFE2;P63261;P68133;P68032;P63267;P62736;A6NL76;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;ACTG2;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, gamma-enteric smooth muscle;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 0 ;; 131.06 0.0019433 3910970000.0 2952580.0 2822650.0 1975020.0 1415740.0 2063070.0 1989930.0 1373210.0 1651620.0 2059730.0 1649970.0 False True 2788794.5015776916 2687045.657115971 2102332.949343728 1550291.5039422484 2225421.871737417 1977510.1087429447 1512027.4680380968 1645890.9157110075 1685734.9535679074 1635352.549457237 1.7053169987739187 1.6430987055407622 1.2855533505857675 0.9479861112863892 1.360820865492288 1.2092255638695568 0.9245880764609008 1.0064440944292217 1.0308082829768983 1.0 20.64117025491014 -3.789800024495154 0.5268989595710695 1.015673955193928 2.735837211477116 0.7569961310161377 0.13310731916270588 3.3404771056762277 0.49366599291112206 0.07985707733389781 3.9280692272544484 0.00016225570489937876 3.789800024495154 1.720163256283188 IIAPSRGS(ph)PLPVLSWANR ddPTM_KYSE-520_SHP099_60min_R1 1 IIAPSRGSPLPVLSWANR 18 1 C9J2U0;P24864-3;I3L1Q9;I3L413;P24864-2;P24864 C9J2U0 CCNE1 G1/S-specific cyclin-E1 1 IIAPS(0.01)RGS(0.99)PLPVLSWANR 109.39 7.579800000000001e-05 541690000.0 137930.0 198690.0 156870.0 103220.0 144800.0 149270.0 104190.0 116590.0 142660.0 129410.0 True False 130278.7479433617 189144.63416022962 166982.09120087454 113029.99776577548 156194.93620069994 148338.3505611048 114722.54199640929 116185.57650231043 116756.54016594296 128263.52807945634 1.0157115580249514 1.4746564124063297 1.30186728605682 0.8812325643791427 1.2177657868879197 1.1565123210178077 0.894428398424697 0.9058348717051983 0.9102863605436998 1.0 16.9687514707477 -6.179150177260767 0.7234926005034363 0.9119849913008298 1.2555381718088057 0.3433221238864429 0.15655891492211235 0.7732276899589894 0.8946229642585486 0.11327855797474148 0.12354031263589249 6.619875515229811e-07 6.179150177260767 0.3435531805079759 IIDDSEITKEDDALWPPPDR ddPTM_KYSE-520_SHP099_60min_R1 3 IIDDSEITKEDDALWPPPDR 20 1 P61326;Q96A72;F5H6N1;F5H6P7;F5H3U9 P61326 MAGOH;MAGOHB Protein mago nashi homolog;Protein mago nashi homolog 2 0 ;; 144.88 1.9338e-06 648110000.0 306428.0 388810.0 293494.0 253833.0 337861.0 319226.0 264595.0 292432.0 311404.0 309620.0 False True 289429.82799092634 370130.98398429184 312413.0928470034 277957.2120023257 364448.7385338722 317233.5921231276 291342.84479834867 291417.62164614163 254860.8834560162 306877.0076807146 0.9431460185901548 1.2061215885205347 1.0180400780368948 0.9057609564921264 1.1876052275413778 1.0337483232148443 0.9493798411299416 0.949623511544868 0.8304984638053504 1.0 18.22730103243534 -6.794537798426451 3.368597960219572 0.9231437652335511 1.0558702841811638 0.26487538658798704 0.09587234907045308 0.3185588304972343 7.466895474494181 0.041884863383016405 0.028332684130060144 1.6049525664266252e-07 6.794537798426451 0.13272651894761267 IIDPLPPIDHS(ph)EIDYPPFEK ddPTM_KYSE-520_SHP099_60min_R1 1 IIDPLPPIDHSEIDYPPFEK 20 0 Q86XP3;A0A0A0MSJ0;Q86XP3-2 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 1 IIDPLPPIDHS(1)EIDYPPFEK 77.28699999999999 0.0057144 21236000.0 31695.0 33022.0 33646.0 31189.0 28696.0 30759.0 25435.0 34015.0 34063.0 44157.0 True False 29936.815167583925 31435.573552967475 35814.874995503415 34153.193182685216 30954.211942094502 30567.021671528262 28006.218021678404 33897.009904160695 27878.017858352126 43765.80333362616 0.6840229788398026 0.7182679434291313 0.8183301177516857 0.780362533787758 0.7072693652194829 0.698422497549428 0.6399109781714131 0.7745090303898736 0.6369817468181346 1.0 15.417516431334555 -10.175279630510664 6.0720448292131195 1.000002741501948 0.7209207071226137 0.6943189864676282 0.05618092714270225 2.15613164953619e-06 2.927906655097696e-07 0.056250598164329854 0.013642639831701601 6.679137274438094e-11 10.175279630510664 -0.2790820343793342 IIDSAR ddPTM_KYSE-520_SHP099_60min_R1 2 IIDSAR 6 0 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 ; 138.61 0.052351 1419070000.0 2475500.0 2941500.0 1947940.0 1600880.0 2629300.0 2807000.0 1952180.0 2421300.0 2493300.0 2541500.0 False True 2338179.0802130974 2800185.9247184866 2073507.329214199 1753027.1538778762 2836210.9513294226 2789480.4717962197 2149525.405840776 2412901.0754356706 2040579.5709781686 2518984.287257079 0.9282229714736092 1.1116329462172263 0.8231521489449385 0.695926196422109 1.125934356032753 1.1073830376423999 0.8533302159583509 0.957886513084636 0.8100803094727339 1.0 21.264410692282794 -11.136214639773142 3.954293133474361 1.2118722227573206 0.938702691177741 0.01903439356101644 0.1378462923261191 0.25601002437097786 0.00881885091495013 0.13270845407177512 0.03354417335926757 7.307778245678838e-12 11.136214639773142 -0.2731695315795797 IIEIEDEAEKWQK ddPTM_KYSE-520_SHP099_60min_R1 4 IIEIEDEAEKWQK 13 1 Q14134-2;Q14134;E9PRL4 Q14134-2 TRIM29 Tripartite motif-containing protein 29 0 ;;; 187.98 3.0224e-08 302915000.0 567709.0 532465.0 335102.0 323119.0 506131.0 467815.0 344181.0 336900.0 443996.0 361729.0 False True 536217.0500701658 506884.5821537411 356703.2111021571 353828.13261073024 545960.6302085386 464895.1930578372 378974.1743628585 335731.3725330509 363377.5186283328 358524.36248090357 1.4956223514621738 1.4138079171139724 0.9949204250273411 0.9869012252398233 1.522799249765401 1.2966906623607743 1.0570388347961825 0.93642554779226 1.013536475217044 1.0 18.451711630842873 -1.0000000000000002 0.21100391859118184 0.971872171505636 3.3272782617216317 0.3578742221868897 0.17753241858390192 68.14963087244513 0.8500409834248629 0.33546999927573534 53.97104852822498 0.09999999999999995 1.0000000000000002 2.355406090215996 IIEQLS(ph)PQAATSR ddPTM_KYSE-520_SHP099_60min_R1 5 IIEQLSPQAATSR 13 0 Q03468;P0DP91;D6R9X7 Q03468 ERCC6 DNA excision repair protein ERCC-6 1 IIEQLS(1)PQAATSR;IIEQLS(1)PQAATSR;IIEQLS(1)PQAATSR;IIEQLS(1)PQAATSR;IIEQLS(1)PQAATSR 184.37 3.2608e-08 2438860000.0 2840770.0 3285260.0 2476740.0 2361200.0 2398730.0 2622390.0 2296410.0 2711380.0 3117400.0 2968630.0 True False 2683186.8251654 3127431.178324205 2636394.623324114 2585607.7380793327 2587496.404093266 2606022.6912838183 2528553.5336018284 2701974.855620847 2551358.743258868 2942330.2477591913 0.9119257864438742 1.0629096379327174 0.8960226763572612 0.8787619065019877 0.8794038011415753 0.8857002687813522 0.8593710836937881 0.9183112118969673 0.8671218144876571 1.0 21.488527753396593 -4.866317818265215 10.390598756984504 0.8917151929147793 0.9872439771591017 0.32526871686193637 0.05083483121288368 0.2902103440364446 26.33897843900821 0.012066350030433022 0.025170675790242927 1.3604487368091951e-05 4.866317818265215 0.09552878424432243 IIEVVDAIMTTAQSHQR ddPTM_KYSE-520_SHP099_60min_R1 1 IIEVVDAIMTTAQSHQR 17 0 Q01813-2;Q01813;Q5VSR5 Q01813-2 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 134.14 2.6764e-05 341830000.0 36104.0 43327.0 33333.0 47979.0 37924.0 44830.0 29369.0 25536.0 34069.0 18838.0 False True 34101.239148460336 41245.50588484713 35481.69851468568 52538.909734587636 40908.40304195676 44550.19934115586 32337.905133818476 25447.421576147193 27882.928409599812 18671.109975742216 1.82641734705463 2.2090548413261937 1.9003529281753486 2.8139146415423064 2.1910000581168214 2.38604985986565 1.7319755052502162 1.3629303029765698 1.4933728335286829 1.0 14.18852007620293 -7.021999146484793 2.667861431297937 1.313447659715658 2.2317733132320843 0.6906663900477199 0.28076757618053905 0.16789251839855265 2.378550461677647 0.1500941623802349 0.08307277954182958 9.506066618735351e-08 7.021999146484793 0.9183256535164264 IIFEDDR ddPTM_KYSE-520_SHP099_60min_R1 7 IIFEDDR 7 0 D6REP8;D6RE99;D6RD60;P49773;D6RC06 D6REP8 HINT1 Histidine triad nucleotide-binding protein 1 0 ;;;;;; 143.0 0.011902 7490400000.0 8098210.0 8900840.0 8280490.0 4811610.0 7949310.0 8573970.0 6362310.0 6685740.0 7962300.0 7797820.0 False True 7648986.147918596 8473230.285966778 8814263.63465245 5268903.967736705 8574875.47161315 8520456.672877314 7005474.384961852 6662548.728403442 6516547.033248894 7728737.381412156 0.989681207995841 1.0963278822676974 1.1404532460697938 0.6817289432564466 1.109479472317947 1.1024383741345987 0.9064189969515883 0.8620487926562326 0.843158036255881 1.0 22.881801314346305 -6.896071993100598 7.89413434453814 0.888519777702744 1.0174369545751012 0.16328343695826475 0.12873855882254354 0.4326428833418725 29.345290025460923 0.055250937804091634 0.03718987356275781 1.2703634992904627e-07 6.896071993100598 0.12891717687235715 IIGATDS(ph)SGELMFLMK ddPTM_KYSE-520_SHP099_60min_R1 1 IIGATDSSGELMFLMK 16 0 Q13185;P83916;K7ELA4;B5MD17;J3KS05 Q13185;P83916 CBX3;CBX1 Chromobox protein homolog 3;Chromobox protein homolog 1 1 IIGATDS(0.555)S(0.444)GELMFLMK 84.46799999999999 0.0031524 100860000.0 108930.0 110720.0 98679.0 83581.0 93440.0 95742.0 78850.0 98429.0 128090.0 112130.0 True False 102887.43575342851 105400.84500589181 105040.00623198246 91524.51311045604 100793.19639912577 95144.43866430827 86820.92750184172 98087.57277250127 104832.08488613229 111136.61543581996 0.9257744205180043 0.9483899126544799 0.9451431089571176 0.8235315854414366 0.9069305917214351 0.8561034389179597 0.7812090296377593 0.8825855672125057 0.9432722462802688 1.0 16.761974684546242 -5.229031993472268 24.545718570969438 0.8753219129397353 0.940631250254559 0.14596665029181366 0.057813359991373436 841.2556426955109 637174.7317761402 0.015455018988424668 0.0267658840176198 5.901576030217151e-06 5.229031993472268 0.06530933731482369 IIGATDSS(ph)GELMFLMK ddPTM_KYSE-520_SHP099_60min_R1 1 IIGATDSSGELMFLMK 16 0 Q13185;P83916;K7ELA4;B5MD17;J3KS05 Q13185;P83916 CBX3;CBX1 Chromobox protein homolog 3;Chromobox protein homolog 1 1 IIGATDS(0.176)S(0.824)GELMFLMK 139.86 1.7104e-05 42941000.0 111420.0 113880.0 99528.0 82628.0 91327.0 91448.0 78204.0 101020.0 132370.0 104400.0 True False 105239.3104897365 108409.03386263497 105943.73413043049 90480.94027698589 98513.91532045104 90877.23911108676 86109.62351748913 100669.58519824517 108334.94477615217 103475.09722197088 1.0170496410743264 1.0476823581047718 1.0238573045567088 0.874422375104317 0.9520543393075794 0.8782522708448424 0.8321772661181465 0.972887080089353 1.0469663492439745 1.0 16.658924078516872 -5.1666024976126055 7.253338477980784 0.9295208878994302 1.0326440076773158 0.325491212857266 0.06065964921186039 0.30741736817934234 20.518503900238297 0.017298378421771603 0.03016710648861381 6.813927406053838e-06 5.1666024976126055 0.10312311977788557 IIGS(ph)PETK ddPTM_KYSE-520_SHP099_60min_R1 7 IIGSPETK 8 0 E9PMS6;H0YDG6 E9PMS6 LMO7 1 IIGS(0.933)PET(0.067)K;IIGS(0.833)PET(0.167)K;IIGS(0.827)PET(0.173)K;IIGS(1)PETK;IIGS(0.844)PET(0.156)K;IIGS(0.998)PET(0.002)K;IIGS(0.999)PET(0.001)K 133.83 0.00075608 3965050000.0 10908500.0 9372030.0 8505400.0 7226590.0 8198860.0 8348570.0 7661740.0 8034010.0 10028100.0 8252660.0 True False 10303383.759444376 8921783.611096164 9053671.693121174 7913402.940846497 8844063.63686789 8296463.4778852 8436263.450576544 8006141.894462034 8207249.827829044 8179547.852872322 1.2596519935788688 1.0907428835400967 1.106867012208003 0.9674621486648108 1.0812411389906127 1.0142936537710727 1.0313850597027896 0.9788000557574347 1.003386736706601 1.0 22.963589665737207 -1.0000000000000357 0.6365358640523274 1.00813893187006 21.126365006413383 0.8179854356507222 0.03515132552319165 79.09487191658441 0.5370520054894803 0.014305200699100216 2234.990593896199 0.09999999999999176 1.0000000000000357 20.118226074543323 IIGVHQEDELLECLS(ph)PATSR ddPTM_KYSE-520_SHP099_60min_R1 3 IIGVHQEDELLECLSPATSR 20 0 H3BND8;A0A669KBL1;Q93009-3;Q93009 H3BND8 USP7 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 7 1 IIGVHQEDELLECLS(1)PATSR;IIGVHQEDELLECLS(0.999)PAT(0.001)SR;IIGVHQEDELLECLS(0.996)PAT(0.004)S(0.001)R 296.35 2.9094e-44 922990000.0 646650.0 623550.0 524280.0 444810.0 405740.0 490330.0 407690.0 456770.0 595100.0 504900.0 True False 610779.0354351838 593593.7220323691 558075.92767766 487084.60866299644 437669.4296551936 487269.6685913217 448903.28387096827 455185.571480919 487044.84125019365 500426.9788062557 1.2205158021099654 1.1861745013195695 1.1151995222338393 0.9733380279075144 0.8745919948185703 0.973707831967173 0.8970405331499219 0.9095943879099847 0.9732585609433279 1.0 18.932800043998093 -5.138606205532683 2.080040633212133 0.9317885192538174 1.2065227256424509 0.8945241153305596 0.03726436319436183 0.08964887849646229 0.754117796908253 0.010747563661979192 0.02383814207908775 7.267646491653604e-06 5.138606205532683 0.27473420638863344 IIHNFIR ddPTM_KYSE-520_SHP099_60min_R1 2 IIHNFIR 7 0 Q9NS86 Q9NS86 LANCL2 LanC-like protein 2 0 ; 155.73 0.0019760999999999997 1007750000.0 963200.0 791340.0 695730.0 584770.0 1041780.0 893370.0 631850.0 653100.0 609280.0 623480.0 False True 909769.3759084024 753322.8385744446 740577.869007358 640346.3649824889 1123762.1590826306 887794.1464512243 695723.5642617458 650834.5485346863 498650.11069890443 617956.4522600998 1.4722224722810688 1.219054895889927 1.1984305144784644 1.0362321853595036 1.8185135133270454 1.4366613427276733 1.1258456185985635 1.0532045521239222 0.8069340628698882 1.0 19.23714564861494 -7.104399040787379 2.4155857559164104 0.9336008804913777 1.3521456576382014 0.44938482378570666 0.204378238278693 0.3118908506465245 3.523032915229772 0.12706851771930888 0.06382865986858437 7.863229641834057e-08 7.104399040787379 0.4185447771468237 IIIEELSLVAAS(ph)PTLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 IIIEELSLVAASPTLSPR 18 0 Q16513-3;Q16513-2;Q16513;Q16513-4;B1AL79;H0Y5V5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 2 IIIEELSLVAAS(0.994)PT(0.007)LS(0.999)PR;IIIEELSLVAAS(0.991)PT(0.012)LS(0.997)PR;IIIEELSLVAAS(0.992)PT(0.22)LS(0.788)PR 178.06 7.0794e-09 743350000.0 154845.0 162863.0 162869.0 150384.0 149511.0 156176.0 116382.0 158687.0 190253.0 142264.0 True False 146255.4391741451 155038.8170176532 173367.79633961368 164676.4501454019 161276.6650987767 155201.24765345437 128147.02833886292 158136.55183482403 155707.8510878393 141003.65163971702 1.0372457555060142 1.0995376021452117 1.2295269968085034 1.167887839998442 1.1437765137519977 1.1006895626363924 0.9088206358392442 1.121506783660354 1.1042824017472503 1.0 17.105372999715446 -6.531524618134858 24.880013135903955 1.038203314865539 1.1387671458080841 0.3136335227462732 0.07103611297858635 245.28378583893368 705839.1023403713 0.028316914969903927 0.021965567037863398 2.9408669849470297e-07 6.531524618134858 0.10056383094254517 IIIEELSLVAASPT(ph)LSPR ddPTM_KYSE-520_SHP099_60min_R1 3 IIIEELSLVAASPTLSPR 18 0 Q16513-3;Q16513-2;Q16513;Q16513-4;B1AL79;H0Y5V5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 IIIEELSLVAASPT(0.588)LS(0.412)PR;IIIEELSLVAAS(0.002)PT(0.991)LS(0.006)PR;IIIEELSLVAAS(0.099)PT(0.451)LS(0.451)PR 281.96 4.858199999999999e-37 2619560000.0 1418899.0 1966680.0 1601782.0 1369086.0 1314319.0 2092790.0 1506444.0 2312260.0 2517030.0 2144360.0 True False 1340189.8439649693 1872197.7407531368 1705035.430661816 1499203.5218092857 1417748.427847841 2079728.1213289672 1658730.0609966302 2304239.3097455422 2060000.801162787 2125362.6386868367 0.6305699646593066 0.880883905021442 0.8022327106094602 0.7053871628869764 0.6670618943051536 0.9785285971780961 0.7804456664494125 1.0841628942763506 0.9692467363760409 1.0 21.019277590527086 -6.842847652041337 1.2307400410462497 1.016796530132619 0.7534543877659664 0.541601551590782 0.10011973051805541 0.3702417592374858 1.1060248091871183 0.0676174189961083 0.03598167629983089 1.4359930829663495e-07 6.842847652041337 -0.26334214236665254 IIIEELSLVAASPTLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 IIIEELSLVAASPTLSPR 18 0 Q16513-3;Q16513-2;Q16513;Q16513-4;B1AL79;H0Y5V5 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 IIIEELSLVAASPT(0.006)LS(0.994)PR;IIIEELSLVAAS(0.08)PT(0.206)LS(0.713)PR 316.33 1.0819e-47 1067257000.0 981170.0 1337380.0 926310.0 775240.0 753970.0 1159320.0 820350.0 1319350.0 1503230.0 1379590.0 True False 926742.5441860957 1273130.2573516937 986021.4247484024 848918.5765155954 813303.1494975263 1152084.2538520817 903278.9838444608 1314773.4827886035 1230281.3253445271 1367367.9059047778 0.6777565424668035 0.9310809854859599 0.7211090888490314 0.6208413791560158 0.5947946752190072 0.8425561612766943 0.6605968883310651 0.9615360117134145 0.8997441873776162 1.0 20.382970038026937 -7.269751367096725 24.409608068578862 0.9479801080443065 0.7252534397241526 0.5421007987237543 0.09783477012889881 391.7642017908495 1150474.680643948 0.054492450988944695 0.026896584647677097 5.373393342474713e-08 7.269751367096725 -0.22272666832015398 IILDLISES(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 4 IILDLISESPIK 12 0 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IILDLISES(1)PIK;IILDLISES(1)PIK;IILDLISES(1)PIK;IILDLISES(1)PIK 216.34 9.561e-11 20752640000.0 15179220.0 15560940.0 11554750.0 11124330.0 11538630.0 15694580.0 12532890.0 15810220.0 15461000.0 16446350.0 True False 14337198.407575114 14813369.08495288 12299587.673253683 12181582.978548221 12446654.535175977 15596624.304611143 13799836.830419224 15755378.03695309 12653672.140092818 16300648.134066692 0.8795477510867701 0.9087595145369987 0.7545459279958814 0.7473066640270551 0.7635680761161723 0.9568100713747565 0.8465820939707895 0.9665491769021108 0.7762680376891232 1.0 23.958425993159548 -6.258615062118444 24.998409269574733 0.903234963056123 0.8095442173579482 0.28858014055664705 0.07702526066349626 366.1097180684253 3240493.096046511 0.02639813304915533 0.025266904191780272 5.512961224609858e-07 6.258615062118444 -0.09369074569817482 IILDLISES(ph)PIKGR ddPTM_KYSE-520_SHP099_60min_R1 9 IILDLISESPIKGR 14 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IILDLIS(0.012)ES(0.988)PIKGR;IILDLIS(0.004)ES(0.996)PIKGR;IILDLIS(0.001)ES(0.999)PIKGR;IILDLIS(0.011)ES(0.989)PIKGR;IILDLISES(1)PIKGR;IILDLISES(1)PIKGR;IILDLISES(1)PIKGR;IILDLISES(1)PIKGR;IILDLIS(0.097)ES(0.903)PIKGR 245.97 8.6041e-19 33236727800.0 2873406.0 2865483.0 2764323.0 2304450.3 2506731.0 2696751.0 2289779.0 2451765.3 3588229.0 2414518.6 True False 2714012.441187149 2727820.8955023317 2942515.6836531796 2523464.5636537513 2703996.468351636 2679919.576700009 2521252.2074095085 2443260.6984206242 2936697.0654920866 2393127.8436710434 1.1340858568691718 1.1398559014372884 1.2295689473652935 1.0544629156889387 1.1299005506549629 1.1198397042545913 1.053538453483506 1.0209486738797362 1.2271375611038027 1.0 21.190466038705246 -5.2758708046139855 24.964981115813014 1.0892379572192428 1.165038807774129 0.24526924226675217 0.06517148088275665 1131.8925683592195 1958062.9249475843 0.017784511906993115 0.026529067593680816 5.298210333968368e-06 5.2758708046139855 0.07580085055488617 IILS(ph)PFATTTK ddPTM_KYSE-520_SHP099_60min_R1 2 IILSPFATTTK 11 0 Q9P0V3 Q9P0V3 SH3BP4 SH3 domain-binding protein 4 1 IILS(1)PFATTTK;IILS(0.978)PFAT(0.018)T(0.004)T(0.001)K 133.15 0.00012701 719780000.0 1139670.0 1336630.0 1123230.0 1003380.0 1028820.0 1391710.0 1096370.0 1464450.0 1579490.0 1363580.0 True False 1076450.2332241798 1272416.2884774683 1195635.203031543 1098740.933522804 1109782.280814944 1383023.8216613873 1207201.7791400664 1459370.1647551989 1292694.4317026841 1351499.742049188 0.7964857111937225 0.9414846698736244 0.8846729050933313 0.8129790182992245 0.8211487181878822 1.0233252575871021 0.8932312316313636 1.0798153483495707 0.9564888482647128 1.0 20.36612980584022 -6.261721541881096 24.999986175917577 0.9894767922423745 0.8560805346774212 0.5834470901662027 0.058745071632625476 19.857474755722073 1759347.6684114242 0.01989112804042039 0.018651887783295365 5.473668075050183e-07 6.261721541881096 -0.13339625756495332 IINEPTAAAIAYGLDK ddPTM_KYSE-520_SHP099_60min_R1 1 IINEPTAAAIAYGLDK 16 0 E9PKE3;P11142;P11142-2;E9PN89;P54652;E9PLF4;E9PI65;P11021 E9PKE3;P11021 HSPA8;HSPA2;HSPA5 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;78 kDa glucose-regulated protein 0 141.34 0.00011888 211360000.0 87863.0 106410.0 111550.0 102080.0 119310.0 122130.0 106680.0 109850.0 130130.0 148780.0 False True 82989.06423945191 101297.9038753336 118740.69148631065 111781.65250852882 128699.01821896051 121367.74136817672 117464.25549646761 109468.95598918262 106501.67231034738 147461.9249490883 0.5627829981746416 0.6869427746200046 0.8052294958668568 0.7580373886148698 0.8727610077204285 0.8230446022597312 0.7965734581114583 0.7423540417431627 0.7222316699522091 1.0 17.169982969398447 -11.219047975587731 0.03435829263846137 1.9109463653611931 2.684101959640587e-42 0.5156503539909667 0.07647816995604216 631.5751953022487 2.843262832799292 105.56634121827555 58.10877722554297 6.038819161407107e-12 11.219047975587731 -1.9109463653611931 IINEPTAAAIAYGLDKK ddPTM_KYSE-520_SHP099_60min_R1 1 IINEPTAAAIAYGLDKK 17 1 E9PKE3;P11142;P11142-2;E9PN89;P54652;E9PI65 E9PKE3 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 138.75 3.1354e-05 1192100000.0 1252200.0 1288300.0 1076300.0 839360.0 1306600.0 1138100.0 832860.0 1005600.0 1160400.0 959680.0 False True 1182737.9698011875 1226408.1342222765 1145680.020140887 919132.5220372138 1409421.9864629433 1130996.6957432393 917053.6167302971 1002111.8083088036 949700.6113035202 951177.9818197417 1.2434454880236379 1.2893571525656844 1.204485429686918 0.9663097123829336 1.4817647311037565 1.1890484403134294 0.9641241011233673 1.053548155510936 0.9984467990802361 1.0 19.859355793928366 -6.677784097920471 5.620302079722069 1.009112019043077 1.2330706856304419 0.4635339268101638 0.1191375215973912 0.19806628065386944 10.160219701932938 0.04687482903809458 0.0357569056918485 2.0999835951256857e-07 6.677784097920471 0.22395866658736496 IINEPTAAAIAYGLDKR ddPTM_KYSE-520_SHP099_60min_R1 2 IINEPTAAAIAYGLDKR 17 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 233.63 9.5859e-23 1602450000.0 584720.0 632250.0 421790.0 358090.0 571260.0 551430.0 394730.0 489320.0 498980.0 408810.0 False True 552284.4159895781 601875.7609734023 448979.25828786177 392122.7659363155 616214.9119752193 547988.3208274273 434633.1605935572 487622.66312814696 408377.8102621767 405188.2614493677 1.363031628838516 1.4854225016797844 1.1080756798873015 0.9677545063464658 1.5208113625281354 1.3524289150610151 1.0726696746812565 1.2034471615340225 1.0078717700295658 1.0 18.62823285342756 -1.0000000000295113 0.06907857645046783 0.6964035282160121 2.4205413218997673 0.28214720650554337 0.1671194014891989 381.34879754657885 1.9518222064097615 8.628063565697664 64.11252349287402 0.09999999999320477 1.0000000000295113 1.7241377936837552 IINLGPVHPGPLS(ph)PEPQPMGVR ddPTM_KYSE-520_SHP099_60min_R1 2 IINLGPVHPGPLSPEPQPMGVR 22 0 Q86T03;Q86T03-2 Q86T03 TMEM55B Type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase 1 IINLGPVHPGPLS(1)PEPQPMGVR;IINLGPVHPGPLS(1)PEPQPMGVR 111.79 0.00012509 213635000.0 126789.0 141346.0 132439.0 130942.0 160697.0 274395.0 242220.0 379660.0 389660.0 311090.0 True False 119755.76142239464 134555.52599532856 140976.2298498924 143386.68831085225 173342.93965914255 272682.3990233425 266705.96143939253 378343.0480733103 318907.5665292398 308333.9846243578 0.3883962436651045 0.43639537872951983 0.4572192391365592 0.4650369257399237 0.5621921302976889 0.8843734801259437 0.8649904802557509 1.2270559423874223 1.0342926256337386 1.0 18.234134386739218 -6.383607235189417 1.204679359001093 1.088198426225676 0.42088776383221604 0.9285802845426749 0.07700373462413304 0.10525115782248573 0.3127817042967274 0.03974258595957452 0.03209480502523584 4.134212205413514e-07 6.383607235189417 -0.66731066239346 down IIPELVGS(ph)PTQSTSSR ddPTM_KYSE-520_SHP099_60min_R1 10 IIPELVGSPTQSTSSR 16 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6;H7C409 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 IIPELVGS(0.627)PT(0.372)QSTSSR;IIPELVGS(0.949)PT(0.031)QS(0.001)TSS(0.019)R;IIPELVGS(0.977)PT(0.018)QS(0.001)T(0.001)S(0.001)S(0.001)R;IIPELVGS(0.973)PT(0.026)QSTSSR;IIPELVGS(0.946)PT(0.049)QS(0.001)T(0.001)S(0.001)S(0.001)R;IIPELVGS(0.753)PT(0.247)QSTSSR;IIPELVGS(0.967)PT(0.032)QS(0.001)TSSR;IIPELVGS(0.999)PT(0.001)QSTSSR;IIPELVGS(0.991)PT(0.009)QSTSSR;IIPELVGS(0.988)PT(0.012)QSTSSR 206.81 1.9422e-13 4649643000.0 2363178.0 2529785.0 1969843.0 1658544.0 1886006.0 2335325.0 1722195.0 2099309.0 2556362.0 2182179.0 True False 2232087.805461451 2408250.3313153004 2096822.231640238 1816171.5231005645 2034423.9422937667 2320749.370430175 1896291.2776034777 2092026.9870614028 2092191.1014418195 2162846.5917695723 1.0320139273656148 1.1134633128764562 0.969473396596605 0.8397135192166498 0.9406233202278418 1.0730069248838456 0.8767571795519683 0.9672562977986214 0.9673321766802033 1.0 21.044499909546804 -4.857161659076129 6.215078759307828 0.9488652017554408 1.0717413411706609 0.36400842687631696 0.0627186456712534 0.20091330214124972 10.741262541339864 0.016630390336814318 0.035521747215477406 1.3894353401755964e-05 4.857161659076129 0.12287613941522013 IIPGFMCQGGDFTR ddPTM_KYSE-520_SHP099_60min_R1 1 IIPGFMCQGGDFTR 14 0 P62937;C9J5S7;F8WE65;F5H284;Q9Y536;A0A0H2UH34;P0DN26;A0A0B4J2A2;A0A075B767;A0A075B759 P62937 PPIA;PPIAL4D;PPIAL4A;PPIAL4C;PPIAL4E Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C 0 155.33 0.0001306 47766000.0 60186.0 73022.0 80019.0 78333.0 57310.0 66237.0 66480.0 65599.0 82500.0 69150.0 False True 56847.36260218354 69513.91351174336 85177.15277492671 85777.74476832477 61819.97095070516 65823.59031363238 73200.44718227572 65371.45237992176 67520.07965575688 68537.3847978859 0.8294358293626787 1.0142481175308513 1.2427838182929047 1.2515468021034073 0.9019890550684108 0.9604041722301427 1.0680367714370924 0.9538072188295431 0.98515693084688 1.0 16.06460352309748 -5.795073101064731 24.999501874488693 0.9795215729988997 1.0907916729098455 0.16288514175474567 0.11765789823154095 365.77126073680984 271871.0839441484 0.03958835187729223 0.04489135260366582 1.6029755528565557e-06 5.795073101064731 0.11127009991094572 IIPS(ph)PDDSKFLLK ddPTM_KYSE-520_SHP099_60min_R1 3 IIPSPDDSKFLLK 13 1 A0A3B3ITL0;Q9Y2H2;A0A3B3ITR9;A0A3B3ISI3;A0A3B3ISJ5;Q9Y2H2-3;Q9Y2H2-2 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 IIPS(0.996)PDDS(0.004)KFLLK;IIPS(0.998)PDDS(0.002)KFLLK;IIPS(0.999)PDDS(0.001)KFLLK 149.0 4.5225e-06 1028337000.0 1235150.0 1190020.0 1102070.0 881980.0 1058820.0 1017460.0 856350.0 928000.0 1448750.0 1064890.0 True False 1166633.7672895198 1132849.6529435648 1173111.1955743474 965803.1140230428 1142143.1101382948 1011109.6547323772 942918.2151706029 924780.9845968275 1185693.5200154893 1055455.903071883 1.1053363422328266 1.073327317272497 1.1114734326275795 0.9150577596014126 1.0821324764152729 0.9579837980815334 0.8933752821186168 0.8761910203024791 1.1233946549207336 1.0 20.009434873496232 -5.249056250359982 24.635725425908216 0.9730869809287661 1.0943738715820317 0.34542349180365384 0.07443214364542015 714.9293237300325 1422318.8517838374 0.02033395073267031 0.034879565757402094 5.635646575051711e-06 5.249056250359982 0.12128689065326559 IIPTLEEGLQLPS(ph)PTATSQLPLESDAVECLNYQHYK ddPTM_KYSE-520_SHP099_60min_R1 5 IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK 36 0 P61978;P61978-2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IIPTLEEGLQLPS(0.882)PT(0.116)AT(0.002)SQLPLESDAVECLNYQHYK;IIPTLEEGLQLPS(0.846)PT(0.13)AT(0.021)S(0.003)QLPLESDAVECLNYQHYK;IIPTLEEGLQLPS(0.963)PT(0.035)AT(0.001)SQLPLESDAVECLNYQHYK;IIPTLEEGLQLPS(0.956)PT(0.042)AT(0.002)SQLPLESDAVECLNYQHYK;IIPTLEEGLQLPS(0.851)PT(0.144)AT(0.004)S(0.001)QLPLESDAVECLNYQHYK 210.32 4.1574e-22 7610979000.0 3947502.0 5835250.0 3728470.0 3435477.0 3658267.0 5871694.0 3949583.0 5085611.0 6115580.0 4952643.0 True False 3728526.1949098576 5554915.831111185 3968813.1419629212 3761983.7011661767 3946151.8002080466 5835046.579751694 4348845.3938555 5067970.202431529 5005144.833226114 4908766.436117951 0.7595647997174878 1.1316317252821333 0.808515376238112 0.7663806681625912 0.8038988718576763 1.1886991682509715 0.8859344705947634 1.0324325405140853 1.0196339341792726 1.0 22.226929092827746 -6.230213363275946 24.933754913894703 1.0186542832410135 0.8620278886564343 0.33341516135612714 0.12068326539362118 877.7704301741661 700894.0037330149 0.04005974872133128 0.040055805167033 5.885544351155321e-07 6.230213363275946 -0.15662639458457916 IIPTLEEGLQLPSPT(ph)ATSQLPLESDAVECLNYQHYK ddPTM_KYSE-520_SHP099_60min_R1 1 IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK 36 0 P61978;P61978-2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 IIPTLEEGLQLPS(0.391)PT(0.544)AT(0.044)S(0.013)QLPLESDAVECLNY(0.003)QHY(0.003)K 73.29899999999999 0.0023715 274790000.0 137250.0 205950.0 128430.0 120420.0 118340.0 201290.0 120630.0 173120.0 208860.0 164580.0 True False 129636.4688989082 196055.8528627476 136708.8032952654 131864.68059440673 127652.68473750574 200033.6744452655 132824.45763534756 172519.48712651196 170936.28893213815 163121.94924130247 0.7947211856029259 1.201897437926804 0.8380773030920275 0.8083809763659849 0.7825598292028262 1.226283007134499 0.8142647770770778 1.0576105050786755 1.047904894020584 1.0 17.31559139462906 -6.2269965763721515 24.99159000176354 1.0193792639016959 0.8958481350920804 0.19107501182091635 0.1467130250582547 1272.1147752330533 923043.0615559758 0.04860534689906305 0.048602878072064606 5.929299987440502e-07 6.2269965763721515 -0.12353112880961548 IIS(ph)PGSSTPSSTR ddPTM_KYSE-520_SHP099_60min_R1 4 IISPGSSTPSSTR 13 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 IIS(0.974)PGS(0.011)S(0.011)T(0.004)PSSTR;IIS(0.996)PGS(0.002)S(0.002)TPSSTR;IIS(0.999)PGS(0.001)S(0.001)TPSSTR;IIS(0.999)PGSSTPSSTR 191.95 2.2043e-08 2437660000.0 2374150.0 2741490.0 2061050.0 1833790.0 1968230.0 2643480.0 2082370.0 2552690.0 2753730.0 2858880.0 True False 2242451.16674931 2609784.7053396134 2193908.580796597 2008072.850250934 2123118.503303202 2626981.060770881 2292876.2815727317 2543835.3141923216 2253722.0478842114 2833552.5473749866 0.791392123229451 0.9210292245179386 0.7742607712812815 0.7086767641246745 0.7492779709591293 0.9270980568913485 0.8091878457298632 0.8977547695556025 0.7953697735276051 1.0 21.434180526362884 -6.256977127222354 24.98188229542762 0.8746983718679663 0.7909931852104473 0.2925403109912953 0.07434254455363536 603.9930014262268 3381455.007924145 0.025518098948076447 0.024690860981034287 5.533792530060275e-07 6.256977127222354 -0.08370518665751903 IISIFS(ph)GTEK ddPTM_KYSE-520_SHP099_60min_R1 8 IISIFSGTEK 10 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 IISIFS(0.523)GT(0.477)EK;IISIFS(0.993)GT(0.007)EK;IISIFS(0.814)GT(0.186)EK;IISIFS(1)GTEK;IISIFS(1)GTEK;IISIFS(0.995)GT(0.005)EK;IISIFS(0.992)GT(0.008)EK;IISIFS(0.996)GT(0.004)EK 226.04 1.5961e-09 1499504000.0 2414120.0 1949076.0 1974651.0 1882684.0 1840884.0 2259807.0 2151643.0 2472977.0 2748838.0 2363906.0 True False 2280203.951171089 1855439.46333728 2101940.1630133083 2061613.721310414 1985751.0976028242 2245702.706280154 2369152.072452063 2464398.8199841706 2249718.3117669295 2342963.6319310395 0.9732135488982282 0.7919198736380093 0.8971288048892663 0.8799170816028669 0.8475381651426636 0.9584880770980111 1.0111774848589687 1.0518297366626412 0.9602019771483783 1.0 21.159903129824862 -6.4705939979130935 3.420192305095299 1.0090500228569719 0.8746464789967091 0.6205270822096405 0.047264069536885334 0.1502644491991852 3.523066064950161 0.01731934033716371 0.014360739679314094 3.3838102536209356e-07 6.4705939979130935 -0.13440354386026276 IISIFSGTEKGS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 IISIFSGTEKGSK 13 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 IISIFSGTEKGS(1)K;IISIFSGTEKGS(1)K 174.87 2.8111e-07 805660000.0 568270.0 470980.0 536380.0 487510.0 457950.0 466550.0 424720.0 407180.0 547960.0 541830.0 True False 536746.9302818405 448353.41384460725 570955.9130383438 533842.803824774 493988.05962092936 463638.0883920647 467654.84246775135 405767.5876165269 448464.2769474977 537029.8077373614 0.9994732555782839 0.8348762161520054 1.0631735982103514 0.9940654990343738 0.9198522177050515 0.8633377174080633 0.8708172912004571 0.75557740328442 0.8350826536742679 1.0 19.03464264138381 -6.144173113791449 2.5308404813603578 0.8478473588678145 0.9688912205681769 0.28457814229741174 0.07817164513056614 0.34775039809421804 4.350189714660462 0.02828902143394796 0.028225206515718197 7.175082288549617e-07 6.144173113791449 0.12104386170036241 IISPGSSTPSSTRS(ph)PPPGR ddPTM_KYSE-520_SHP099_60min_R1 4 IISPGSSTPSSTRSPPPGR 19 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 IISPGSSTPS(0.005)S(0.005)T(0.005)RS(0.985)PPPGR;IISPGSSTPS(0.009)S(0.009)T(0.009)RS(0.972)PPPGR;IISPGSSTPS(0.024)S(0.162)T(0.162)RS(0.651)PPPGR;IISPGSSTPS(0.002)S(0.011)T(0.011)RS(0.976)PPPGR 132.01 5.2183000000000005e-06 3092950000.0 1048580.0 1212530.0 1163680.0 604280.0 678510.0 897360.0 621540.0 749140.0 1190090.0 894000.0 True False 990413.177107593 1154278.2387553635 1238692.6747538322 661710.5895165929 731904.8768061931 891759.2433812083 684371.3288458418 746541.4081905911 973999.6557275133 886079.8555214754 1.1177470867168235 1.3026796981814333 1.3979469988343625 0.7467843732065923 0.8260032910639332 1.0064095666145016 0.7723585234234626 0.8425215893789131 1.0992233371046398 1.0 19.75707719801767 -5.259671540071098 24.999865145343588 0.8886331231950794 1.275780113937645 0.659669072798627 0.12285542819648528 91.29366829896446 1291017.3889229586 0.033864179472910684 0.05498297623734956 5.49956652640473e-06 5.259671540071098 0.38714699074256564 IISSS(ph)PNKK ddPTM_KYSE-520_SHP099_60min_R1 2 IISSSPNKK 9 1 B9EGE7;Q8TCN5-2;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 IISS(0.065)S(0.935)PNKK;IISS(0.204)S(0.796)PNKK 184.36 6.952999999999999e-06 7134500000.0 18125500.0 15985300.0 14719400.0 13136800.0 14733600.0 16937000.0 14103800.0 15092600.0 19316700.0 15668400.0 True False 17120042.38271156 15217342.193575513 15668236.075872697 14385317.522277076 15893050.497283377 16831289.900538847 15529549.743823389 15040247.293239327 15809274.214380138 15529590.16583073 1.102414307132216 0.9798933539828858 1.0089278537657114 0.9263166232119016 1.0234043736873597 1.0838206108988122 0.9999973970976112 0.9684896467088946 1.0180097507766037 1.0 23.888516420947347 -7.859204549117408 0.0032565048722660605 4.560088477963993e-05 2.006174602239808 0.028719500510672735 0.04833611635661561 68430.84704209231 170.9065362404622 52806.82197826844 52469.56799885473 1.382914884060152e-08 7.859204549117408 2.006129001355028 IISVT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 8 IISVTPVK 8 0 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 IISVT(1)PVK;IISVT(1)PVK;IIS(0.003)VT(0.997)PVK;IIS(0.104)VT(0.896)PVK;IIS(0.006)VT(0.994)PVK;IISVT(1)PVK;IISVT(1)PVK;IIS(0.005)VT(0.995)PVK 182.46 7.044e-05 7881670000.0 10666660.0 12016290.0 8125810.0 7257240.0 8303020.0 11629260.0 8444410.0 9805590.0 11053360.0 11925230.0 True False 10074959.106340472 11439009.391581006 8649612.714355687 7946965.907631231 8956420.436278546 11556677.474685043 9298053.372299647 9771576.696931913 9046348.45653039 11819581.739888543 0.8523955693237142 0.9678015384399613 0.731803620864612 0.6723559329355904 0.7577611994553544 0.9777568892885393 0.7866651779157903 0.8267277905405862 0.7653695922251557 1.0 23.49467564791098 IISVT(ph)PVKNIDPVK ddPTM_KYSE-520_SHP099_60min_R1 4 IISVTPVKNIDPVK 14 1 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 IIS(0.007)VT(0.993)PVKNIDPVK;IIS(0.038)VT(0.962)PVKNIDPVK;IIS(0.012)VT(0.988)PVKNIDPVK;IIS(0.001)VT(0.999)PVKNIDPVK 187.39 2.9785e-10 4010979000.0 6995160.0 9095960.0 6979170.0 4424790.0 5675490.0 7641640.0 4294530.0 4881190.0 8901700.0 7188910.0 True False 6607124.530294256 8658976.42828568 7429058.465266823 4845320.711238373 6122118.773879211 7593945.69023757 4728663.002973796 4864258.291168313 7285375.673595779 7125221.850287352 0.9272868507284161 1.2152570979858648 1.0426424076840803 0.6800238382813255 0.8592179868241314 1.065783753797268 0.6636513363837359 0.6826816614800763 1.0224770297225156 1.0 22.764503503815458 -5.094083575192423 7.524498783472078 0.8418719781293861 1.0853269640208107 0.27906916651707225 0.1527335338592146 0.3096228293789763 21.72696615970962 0.04121771397044621 0.07197133832198682 8.052234698952278e-06 5.094083575192423 0.24345498589142467 IIT(ph)SELYR ddPTM_KYSE-520_SHP099_60min_R1 2 IITSELYR 8 0 A0A3B3ITG6;A0A3B3IUB1;Q13144;A0A3B3ITK8;A0A3B3IST9;A0A3B3ISI2;A0A3B3ISS1;A0A3B3IS56;A0A3B3ISV1;A0A3B3IRP4;A0A3B3ITQ2;A0A3B3IUF2;A0A3B3ISM8;A0A3B3ISX3 A0A3B3ITG6 EIF2B5 Translation initiation factor eIF-2B subunit epsilon 1 IIT(0.5)S(0.5)ELYR;IIT(0.5)S(0.5)ELYR 75.109 0.022528 399010000.0 166812.0 162255.0 120869.0 162565.0 193419.0 125033.0 138829.0 168185.0 162324.0 155038.0 True False 157558.60582852227 154460.02625027986 128660.40913723785 178015.12872305035 208639.97489643053 124252.62266836372 152863.19016047165 167601.60548967397 132850.05345504347 153664.4839377387 1.0253417171684343 1.0051771384782935 0.8372813667819825 1.1584663167526594 1.357763157431789 0.8085968825347308 0.9947854328031212 1.0906983916828972 0.8645462507059942 1.0 17.229424231737525 -7.757900410029784 24.988687176053368 0.9322731324027405 1.0332133810164288 0.06952758166739181 0.14988859041286567 262.9669176561699 1856921.3758809422 0.1147603553589257 0.03946557562680787 1.7462225409521554e-08 7.757900410029784 0.10094024861368833 IIVDELK ddPTM_KYSE-520_SHP099_60min_R1 3 IIVDELK 7 0 P63244;H0Y8W2;J3KPE3;H0YAM7;H0YAF8;D6REE5;D6RAC2;D6RF23;H0Y9P0 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 ;; 148.07 0.010668 118445000.0 443110.0 504960.0 335312.0 270716.0 452130.0 570190.0 397450.0 440430.0 393280.0 505140.0 False True 418529.80498211423 480700.9636395877 356926.74803816905 296444.767246267 487710.0587321986 566631.2327087584 437628.12473819917 438902.2511271346 321870.2657820132 500664.8525929728 0.8359480455129288 0.9601252437633859 0.7129055418802106 0.5921022131091529 0.9741248186412915 1.1317575615187323 0.8740939622018548 0.8766388310544149 0.6428856831371886 1.0 18.933485654105276 IIVEKPFGR ddPTM_KYSE-520_SHP099_60min_R1 3 IIVEKPFGR 9 1 P11413;P11413-3;P11413-2;E7EM57;E7EUI8;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;; 101.11 0.0025611 4847960000.0 4472600.0 3354020.0 2779940.0 2210340.0 3716570.0 3271030.0 2284610.0 2500820.0 2693390.0 2692980.0 False True 4224495.962092948 3192887.8447133396 2959139.3804612644 2420410.0490370486 4009042.914609359 3250614.2884430327 2515560.6744449264 2492145.239115774 2204338.270836597 2669122.2923067333 1.5827285150138308 1.1962313805988833 1.10865635081257 0.9068187156554972 1.5020079545117535 1.2178588811057274 0.9424673727747804 0.9336946629605306 0.8258663445995738 1.0 21.347933976888207 -6.765484114563871 5.106574291767318 0.9163522911334758 1.2405625656888992 0.4359089632359504 0.1821418274209378 0.1885796288409854 13.857362910772236 0.07784568077600917 0.055190224134598 1.7159944758784386e-07 6.765484114563871 0.3242102745554234 IIWCPFIPEES(ph)EDCCEESSPTVALLHEDR ddPTM_KYSE-520_SHP099_60min_R1 1 IIWCPFIPEESEDCCEESSPTVALLHEDR 29 0 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 IIWCPFIPEES(1)EDCCEESSPTVALLHEDR 122.08 0.00014154 40178000.0 25922.0 22858.0 24216.0 24127.0 25593.0 23777.0 19929.0 22146.0 29739.0 26974.0 True False 24484.054985774128 21759.867369442498 25777.002106969947 26420.022825952936 27607.023495749403 23628.59892336967 21943.617808296804 22069.180694915267 24339.1472591825 26735.031345454438 0.9158042371226535 0.8139084292916743 0.9641657708904322 0.9882173873136281 1.0326160885703701 0.8838066661697432 0.820781450552805 0.825478018325478 0.9103840928662575 1.0 14.706443747772989 -6.495894250898517 24.72773123540922 0.8714283281636255 0.9413425091461026 0.1101920756134519 0.07117965539075424 1187.422655970179 1088118.6345768492 0.026434872191860193 0.023245229763326932 3.192315077396239e-07 6.495894250898517 0.06991418098247715 IIYDS(ph)DS(ph)ESEETLQVK ddPTM_KYSE-520_SHP099_60min_R1 1 IIYDSDSESEETLQVK 16 0 P35251-2;P35251;D6RAD2;E0CX09 P35251-2 RFC1 Replication factor C subunit 1 2 IIYDS(1)DS(0.998)ES(0.002)EETLQVK 227.63 2.0653e-18 460660000.0 473600.0 558920.0 424010.0 456230.0 398700.0 433020.0 490110.0 458040.0 470000.0 512860.0 True False 447328.4639018069 532068.644243976 451342.36303998664 499589.96202944824 430075.4217073132 430317.3615593871 539655.1018126522 456451.1661473402 384659.84773582744 508316.45939904224 0.8800196327119951 1.0467271606215836 0.8879160898578549 0.9828325500616074 0.8460780951609759 0.8465540582103722 1.0616518348641713 0.8979665279518593 0.7567330166538223 1.0 18.95536742076305 -5.742773761353521 24.999290380730077 0.9016561303479145 0.9519378157868813 0.06285812141923386 0.09034497411010146 768.4736173502322 1029229.3935100039 0.026707618529174484 0.03441813903636303 1.8081157892286717e-06 5.742773761353521 0.05028168543896683 IIYGGS(ph)VTGATCK ddPTM_KYSE-520_SHP099_60min_R1 1 IIYGGSVTGATCK 13 0 P60174;P60174-3;P60174-4 P60174 TPI1 Triosephosphate isomerase 1 IIY(0.001)GGS(0.99)VT(0.008)GATCK 99.941 0.002167 120890000.0 441050.0 425430.0 385600.0 361030.0 400280.0 419150.0 363360.0 460950.0 544060.0 390960.0 True False 416584.0772886223 404991.7042165515 410456.39298181405 395342.18265237275 431779.75871834334 416533.9293742015 400091.9748518604 459351.0720365393 445272.4186364985 387496.3985622772 1.0750656750211582 1.0451495955038212 1.0592521491934506 1.0202473729283825 1.1142807012410183 1.0749362598456704 1.0325050151080535 1.1854331388391313 1.1491007923908116 1.0 18.5638233763063 -7.2427592096182964 24.98293056743937 1.1254502363800973 1.0606990917148045 0.16052920709890206 0.05084316635985606 1042.170712225624 1393804.4364318277 0.022934401743379868 0.013212587896423373 5.7179557533712814e-08 7.2427592096182964 -0.06475114466529286 IIYIVHDEVK ddPTM_KYSE-520_SHP099_60min_R1 2 IIYIVHDEVK 10 0 P25788-2;P25788;G3V4X5 P25788-2 PSMA3 Proteasome subunit alpha type-3 0 ; 192.92 4.6571e-06 1001520000.0 2216300.0 1900170.0 1176650.0 1151960.0 1628730.0 1804910.0 1220380.0 1288750.0 1176160.0 1334700.0 False True 2093357.420915487 1808882.98098668 1252498.7417065643 1261441.9320505979 1756901.7847939641 1793644.8871926283 1343747.9201610347 1284279.6270465115 962598.9925807891 1322875.5963808873 1.5824295395897223 1.3673870664296837 0.9468000960431506 0.9535605127962454 1.3280929738219394 1.355868149733556 1.0157779944215841 0.9708241882759299 0.7276564744366438 1.0 20.33524596584393 -4.578455159559698 3.9989796489658307 1.0551927117312745 1.5458611032157523 0.510556775221009 0.17600148627268675 0.18208205456637283 5.836297043421969 0.05027462109720962 0.16303861727495306 2.6396408483880824e-05 4.578455159559698 0.49066839148447783 IKDAFDRNPELQNLLLDDFFK ddPTM_KYSE-520_SHP099_60min_R1 4 IKDAFDRNPELQNLLLDDFFK 21 2 P52209-2;P52209 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ;;; 171.85 1.8865e-09 484066000.0 1119424.0 938156.0 700337.0 538887.0 1024492.0 824457.0 541497.0 459957.0 664122.0 457746.0 False True 1057327.3192035812 893085.5775591354 745481.8435988185 590102.6584577159 1105113.6918378966 819311.258046204 596236.8012614421 458361.516521771 543534.1859532201 453690.72656099865 2.3305023825771842 1.9684898219736042 1.6431498374445805 1.3006716335833606 2.435830461457127 1.8058805483123483 1.3141921717927778 1.010295096829898 1.1980279827918017 1.0 18.791349645738453 -6.833516919440009 3.179910257019269 1.0897552291793131 1.9065169993526725 0.6204403976123865 0.30512597704862743 0.18295475457360674 3.7158534975077124 0.1454098973464911 0.09544059041583694 1.467178926776956e-07 6.833516919440009 0.8167617701733594 IKDIAWTEDSKR ddPTM_KYSE-520_SHP099_60min_R1 1 IKDIAWTEDSKR 12 2 O75083;D6RD66 O75083 WDR1 WD repeat-containing protein 1 0 142.85 2.0717e-05 2398300000.0 1247000.0 1128400.0 851650.0 594430.0 1048900.0 871350.0 682950.0 711290.0 921990.0 674910.0 False True 1177826.42416713 1074189.9702370695 906548.7216881795 650924.4484781036 1131442.4625753735 865911.5814391293 751989.2509496856 708822.7010063346 754579.8574765016 668930.8224720341 1.7607596848572051 1.6058311773815415 1.3552204372016052 0.9730818593058876 1.6914192388297005 1.294471045958314 1.1241659461447882 1.0596352824450217 1.1280387031471377 1.0 19.351497496608662 -1.0000000000000004 0.24729246675632222 1.028482446142883 5.498647968121519 0.5604492406834716 0.18483583382462448 40.786748111922826 0.5519550857252089 0.25619090426966823 75.58809385130164 0.0999999999999999 1.0000000000000004 4.470165521978636 IKDLLQQMEEGLK ddPTM_KYSE-520_SHP099_60min_R1 2 IKDLLQQMEEGLK 13 1 Q9NS86 Q9NS86 LANCL2 LanC-like protein 2 0 ; 179.56 2.2619e-07 174768000.0 513430.0 440940.0 326790.0 297490.0 520920.0 471450.0 302230.0 355550.0 372650.0 285430.0 False True 484949.0144026702 419756.58053556684 347855.4062824873 325763.3601563702 561913.4403706398 468507.50567450176 332782.35788055294 354316.6800359943 304986.1537420344 282901.31226117985 1.714198532790672 1.483756215835576 1.229599832896288 1.1515088337788244 1.9862525057920928 1.6560810620841757 1.1763195978862127 1.2524391534418986 1.0780655321261479 1.0 18.109939343246996 -6.816876578289212 7.945959128183924 1.145305553621008 1.5231562267346017 0.4299073259130195 0.2307340819923762 0.30057053613527074 37.60880894538946 0.10528225992269286 0.07112598210425375 1.5244859343619113e-07 6.816876578289212 0.37785067311359377 IKDMDLWEQQEEER ddPTM_KYSE-520_SHP099_60min_R1 7 IKDMDLWEQQEEER 14 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;;;;;; 242.93 1.8428e-18 6366590000.0 3722100.0 3281050.0 2351360.0 2065220.0 3571080.0 3441780.0 2766290.0 2640140.0 2721230.0 2858680.0 False True 3515627.6931776023 3123423.4330435484 2502932.4279090203 2261497.8878689664 3852103.679334219 3420298.5743565303 3045933.5895887045 2630981.970553308 2227123.228625887 2833354.3192193853 1.2408005837216256 1.1023765760097664 0.8833813727181854 0.7981698132593701 1.3595559345346926 1.2071552615766226 1.0750274220655491 0.9285749942062196 0.786037670445495 1.0 21.434079595543338 -7.304716717350243 4.006728223266242 0.8850343921328935 1.0912113610380132 0.22687433713150995 0.1614095625753961 0.3731794730564438 12.988517218859489 0.10175560300980824 0.047320544320362465 4.957734696706126e-08 7.304716717350243 0.20617696890511972 IKDNGDLVLSS(ph)PSNVTLPQVK ddPTM_KYSE-520_SHP099_60min_R1 1 IKDNGDLVLSSPSNVTLPQVK 21 1 A0A494C0P1;P04150-7;P04150-5;P04150-13;P04150-12;P04150-11;P04150-9;P04150-2;P04150-6;P04150-8;P04150-10;P04150;P04150-3 A0A494C0P1 NR3C1 Glucocorticoid receptor 1 IKDNGDLVLS(0.107)S(0.511)PS(0.38)NVT(0.002)LPQVK 117.37 2.7125999999999997e-05 86491000.0 157760.0 155130.0 138280.0 117630.0 142210.0 169040.0 131380.0 168070.0 213810.0 184260.0 True False 149008.73831323683 147677.32194512294 147193.75005582257 128809.5198332508 153401.11793578407 167984.95865779594 144661.1725452372 167487.00439783282 174987.49371148372 182627.5997521107 0.8159157680191473 0.8086254330975852 0.8059775754355628 0.7053124500792335 0.839966785655634 0.9198224084739113 0.7921101341834029 0.9170957983632871 0.9581656548572217 1.0 17.478545284756656 -7.41163415612159 0.6711225802342187 1.0051395551868505 0.7920162624263208 0.6691928566037947 0.04893173996803873 0.4332374705088717 0.4016016441871873 0.048812198461361735 0.023522929824573643 3.875840030365506e-08 7.41163415612159 -0.21312329276052966 IKDPDASKPEDWDER ddPTM_KYSE-520_SHP099_60min_R1 9 IKDPDASKPEDWDER 15 2 P27797;K7EJB9 P27797 CALR Calreticulin 0 ;;;;;;;; 144.33 6.1035e-05 176220300000.0 60438400.0 53025430.0 34195400.0 31315780.0 49656550.0 51571910.0 40134730.0 48007100.0 43412400.0 42434170.0 False True 57085761.47103654 50478008.75000685 36399690.19857446 34292022.31576744 53564237.977878876 51250030.58006125 44191940.185618185 47840574.5750414 35529802.49754649 42058236.26708466 1.3573027910281779 1.2001931899724387 0.8654592638508084 0.8153461809002399 1.2735730913138403 1.2185492100668571 1.0507321302059305 1.13748408923372 0.8447763304176544 1.0 25.32588501542049 -4.5379459117408 7.722877512664922 1.0390138756997578 1.3196782358247645 0.33927402759597747 0.1476250245767211 0.1580312287813647 53.41855918646296 0.04014645994191283 0.11313786851251192 2.8977044535114888e-05 4.5379459117408 0.28066436012500673 IKDYLLMEEEFIR ddPTM_KYSE-520_SHP099_60min_R1 1 IKDYLLMEEEFIR 13 1 P62191 P62191 PSMC1 26S protease regulatory subunit 4 0 123.38 8.9299e-05 148700000.0 442550.0 411840.0 370480.0 404590.0 449770.0 395100.0 357250.0 378750.0 428030.0 358180.0 False True 418000.8692984473 392054.5882155572 394361.73358895857 443042.1119555814 485164.34015876224 392634.0343450961 393364.3164240067 377436.20465091453 350310.5417582265 355006.80385982344 1.1774446707886124 1.1043579558276926 1.1108568323233452 1.2479820305937552 1.3666339204877107 1.1059901671634722 1.1080472603542804 1.0631801997799104 0.9867713462093215 1.0 18.437487149197125 -7.0914125671679935 1.5212686783546625 1.0030902634657155 1.1910585782805938 0.5271386304183595 0.07407660437875073 0.3845839626659352 1.6751887015204137 0.059798879697323934 0.02649951905461216 8.101910341659258e-08 7.0914125671679935 0.1879683148148783 IKEDEDDKTVLDLAVVLFETATLR ddPTM_KYSE-520_SHP099_60min_R1 1 IKEDEDDKTVLDLAVVLFETATLR 24 2 P14625;H0YIV0 P14625 HSP90B1 Endoplasmin 0 54.235 0.040976 68769000.0 17633.0 11415.0 15135.0 20258.0 19192.0 9926.7 13372.0 11222.0 12876.0 9855.7 False True 16654.862339485964 10866.60626573568 16110.62631685621 22183.31422921021 20702.3012124574 9864.7437831776 14723.772258143645 11183.07350123449 10538.042977545778 9768.386165618567 1.7049758329687534 1.1124259505610536 1.6492618170194986 2.270929286895722 2.1193164215111127 1.009864230992237 1.5072881035320214 1.144823035415527 1.0787905800280648 1.0 13.253904518997503 -6.273651327834545 24.894481001453563 1.1796505481312065 1.755741396337566 0.4897571904514305 0.3170503309694911 777.1993971609643 1584343.4272117505 0.1246213974676104 0.11071797040920217 5.325356324970658e-07 6.273651327834545 0.5760908482063596 IKEEEPDPEEWQLS(ph)GDSTLNTNDLTHLR ddPTM_KYSE-520_SHP099_60min_R1 3 IKEEEPDPEEWQLSGDSTLNTNDLTHLR 28 1 A0A494C1G8;A0A494C0Z6;H0Y6K5;A0A494C070;H0Y7L6;Q02447-4;Q02447-3;Q02447-5;Q02447-6;Q02447-2;Q02447 A0A494C1G8 SP3 Transcription factor Sp3 1 IKEEEPDPEEWQLS(1)GDSTLNTNDLTHLR;IKEEEPDPEEWQLS(1)GDSTLNTNDLTHLR;IKEEEPDPEEWQLS(1)GDSTLNTNDLTHLR 226.07 6.1703e-23 1544050000.0 788640.0 869430.0 764180.0 784430.0 762650.0 734550.0 804760.0 812810.0 1001700.0 697750.0 True False 744892.5670851365 827661.2777589636 813440.2655312305 858981.9913525204 822666.2161150816 729965.4009825126 886112.994500725 809990.5518212804 819816.5308020815 691568.4778412855 1.0771060147366764 1.1967886106412609 1.1762251918571605 1.2420779993238156 1.1895658094235506 1.0555215056375649 1.2813091152834286 1.1712369458331104 1.1854451975039684 1.0 19.399512585900418 -9.420461855162648 6.771959261786411 0.9999999999966306 1.1776045396706583 0.40433910709074783 0.06366373538837378 0.0 0.0 0.059883258925693024 0.014523823524544607 3.797852947073947e-10 9.420461855162648 0.17760453967402767 IKEELIAQGLLESEDRPAEDS(ph)EDEVLAELR ddPTM_KYSE-520_SHP099_60min_R1 4 IKEELIAQGLLESEDRPAEDSEDEVLAELR 30 2 O75528-2;O75528 O75528-2 TADA3 Transcriptional adapter 3 1 IKEELIAQGLLESEDRPAEDS(1)EDEVLAELR;IKEELIAQGLLESEDRPAEDS(1)EDEVLAELR;IKEELIAQGLLESEDRPAEDS(1)EDEVLAELR;IKEELIAQGLLESEDRPAEDS(1)EDEVLAELR 277.7 4.7225e-42 844780000.0 727170.0 763710.0 735730.0 710690.0 728330.0 664240.0 648270.0 771510.0 1005500.0 675080.0 True False 686832.4305225427 727020.2252479189 783156.3330096211 778233.7639232598 785645.42736917 660094.2317726833 713803.4581055025 768833.8118817874 822926.5465922874 669099.3164042924 1.0265029625400715 1.0865654879979414 1.170463507896355 1.1631064998025267 1.1741835750052636 0.9865414828399438 1.066812415743373 1.149057834961577 1.2299019389448118 1.0 19.351860844719756 -10.440160992436272 5.460355260896136 0.9998979359878697 1.1163569976894878 0.19552664257858599 0.07119463256441012 9.365846633429795e-05 9.60272262563668e-06 0.07298569459343206 0.017686146433076033 3.629434871203301e-11 10.440160992436272 0.11645906170161813 IKEETEIIEGEVVEIQIDRPATGTGSK ddPTM_KYSE-520_SHP099_60min_R1 3 IKEETEIIEGEVVEIQIDRPATGTGSK 27 2 X6R2L4;M0R0Y3;Q9Y230-2;Q9Y230 X6R2L4 RUVBL2 RuvB-like 2 0 ;; 229.7 2.7416999999999995e-23 6832520000.0 2672190.0 2127840.0 1642040.0 2789550.0 1548010.0 1303030.0 1866730.0 2282590.0 1693800.0 952990.0 False True 2523958.2938212994 2025615.3724470453 1747888.5257568934 3054667.993291212 1669829.580027936 1294897.306435564 2055437.2859291416 2274672.2280505095 1386248.6172232882 944547.2500150017 2.6721355588947113 2.1445357788240593 1.8505040650207099 3.2340023151226114 1.767862412390079 1.37091850769244 2.176108485728476 2.408214335507707 1.4676328973497843 1.0 19.849263442206937 -5.899336308838919 23.56198297848592 1.776109987367682 2.4188109898486725 0.3544797798024365 0.5048039036327785 10.961002152114132 2546.1870903442364 0.15642688713037653 0.17737140988874234 1.2608507791774372e-06 5.899336308838919 0.6427010024809905 IKEEVLS(ph)ES(ph)EAENQQAGAAALAPEIVIK ddPTM_KYSE-520_SHP099_60min_R1 4 IKEEVLSESEAENQQAGAAALAPEIVIK 28 1 Q9UJX5;Q9UJX5-3 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 2 IKEEVLS(1)ES(1)EAENQQAGAAALAPEIVIK;IKEEVLS(1)ES(1)EAENQQAGAAALAPEIVIK;IKEEVLS(1)ES(1)EAENQQAGAAALAPEIVIK;IKEEVLS(1)ES(1)EAENQQAGAAALAPEIVIK 127.17 8.8749e-05 438711000.0 603044.0 546204.0 529262.0 564934.0 481495.0 547038.0 461146.0 558588.0 690380.0 583083.0 True False 569591.9471815899 519963.5399710814 563379.0753691419 618625.1575063987 519385.9171682042 543623.7329285574 507763.13803125324 556650.388603419 565024.3950635327 577917.3382517099 0.9855941489914359 0.899719571563733 0.9748436983625572 1.0704388267322733 0.8987200812133922 0.940660016488005 0.878608590576839 0.9632007066743717 0.9776906793847363 1.0 19.140503627677084 IKEEVLS(ph)ESEAENQQAGAAALAPEIVIK ddPTM_KYSE-520_SHP099_60min_R1 8 IKEEVLSESEAENQQAGAAALAPEIVIK 28 1 Q9UJX5;Q9UJX5-3 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 1 IKEEVLS(0.5)ES(0.5)EAENQQAGAAALAPEIVIK;IKEEVLS(0.5)ES(0.5)EAENQQAGAAALAPEIVIK;IKEEVLS(0.879)ES(0.121)EAENQQAGAAALAPEIVIK;IKEEVLS(0.848)ES(0.152)EAENQQAGAAALAPEIVIK;IKEEVLS(0.713)ES(0.287)EAENQQAGAAALAPEIVIK;IKEEVLS(0.906)ES(0.094)EAENQQAGAAALAPEIVIK;IKEEVLS(0.877)ES(0.123)EAENQQAGAAALAPEIVIK;IKEEVLS(0.631)ES(0.369)EAENQQAGAAALAPEIVIK 323.73 3.997699999999999e-65 19693630000.0 4612800.0 5246090.0 4059867.0 3546772.0 3700471.0 4753860.0 3558796.0 4547410.0 5480390.0 4841850.0 True False 4356918.788611175 4994059.9618583685 4321572.522836877 3883856.1445041173 3991677.0149001377 4724189.396385174 3918553.8301819125 4531636.096083472 4485289.325389256 4798954.975902295 0.9078890738690439 1.0406557233680631 0.9005236649515219 0.8093128949962441 0.831780467819377 0.9844204457235894 0.816543153636308 0.9442964392953984 0.9346387594615714 1.0 22.194288846986076 -9.381886701445652 9.789201201244285 1.0000058350856977 0.9069916076221721 0.13396651732487264 0.0703126911162525 0.0 0.0 0.07071011335201985 0.01714972153822209 4.1506230978510966e-10 9.381886701445652 -0.09301422746352561 IKEEVLSES(ph)EAENQQAGAAALAPEIVIK ddPTM_KYSE-520_SHP099_60min_R1 7 IKEEVLSESEAENQQAGAAALAPEIVIK 28 1 Q9UJX5;Q9UJX5-3 Q9UJX5 ANAPC4 Anaphase-promoting complex subunit 4 1 IKEEVLS(0.438)ES(0.562)EAENQQAGAAALAPEIVIK;IKEEVLS(0.333)ES(0.667)EAENQQAGAAALAPEIVIK;IKEEVLS(0.437)ES(0.563)EAENQQAGAAALAPEIVIK;IKEEVLS(0.431)ES(0.569)EAENQQAGAAALAPEIVIK;IKEEVLS(0.357)ES(0.643)EAENQQAGAAALAPEIVIK;IKEEVLS(0.297)ES(0.703)EAENQQAGAAALAPEIVIK;IKEEVLS(0.332)ES(0.668)EAENQQAGAAALAPEIVIK 211.15 2.1646999999999996e-22 10074040000.0 4261920.0 4563480.0 3543520.0 3019500.0 3316130.0 4310010.0 3231720.0 4006180.0 4913640.0 4302640.0 True False 4025502.801673111 4344243.57087687 3771940.969032461 3306472.37215422 3577090.564801287 4283109.628872963 3558413.7961477675 3992283.496629446 4021446.838784412 4264521.957003269 0.9439517118823513 1.018694150171435 0.8844932696003865 0.7753442016459255 0.8388022387660424 1.004358676554395 0.8344226696509514 0.9361620216477607 0.9430006174971909 1.0 22.023952597171494 -7.970176000906564 1.6880395244149298 0.9985608766074032 0.9006077517819963 0.15132523304823953 0.07176198809670066 0.7659743673489476 4.946156237118111 0.0734266852784143 0.021261254537368737 1.0710851524478367e-08 7.970176000906564 -0.09795312482540697 IKELEQEREDQK ddPTM_KYSE-520_SHP099_60min_R1 1 IKELEQEREDQK 12 2 O75940 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 0 102.5 0.0007417999999999999 392590000.0 683400.0 593990.0 435590.0 368990.0 666030.0 599690.0 477080.0 534860.0 639040.0 530120.0 False True 645490.4396758758 565453.8288028324 463668.8283686422 404058.6986591111 718442.7718076797 595947.112266289 525307.9022521074 533004.6954972629 523006.44488745386 525423.5492271193 1.2285144825072476 1.076186687168088 0.8824667814198349 0.7690152054537108 1.3673592911175856 1.1342223110153846 0.9997798976174896 1.014428638155437 0.9953997030715107 1.0 19.00312133724527 -8.148337445726655 0.008428557754965397 3.147464535473133e-07 2.0543447097495617 0.023718717010334567 0.15825944100005757 17593.932615317477 85.12200074779973 10513.632944819114 10223.86940617678 7.106611171644683e-09 8.148337445726655 2.0543443950031084 IKESLLLEDS(ph)EEEEGDLCR ddPTM_KYSE-520_SHP099_60min_R1 1 IKESLLLEDSEEEEGDLCR 19 1 Q9H992;Q9H992-2;F5H6W4 Q9H992 MARCH7 E3 ubiquitin-protein ligase MARCH7 1 IKESLLLEDS(1)EEEEGDLCR 78.236 0.0045853000000000005 94090000.0 65132.0 66434.0 60925.0 46470.0 52061.0 46927.0 39908.0 54217.0 78501.0 52706.0 True False 61518.998122576966 63242.410920532995 64852.322983446604 50886.49482828503 56157.90451342983 46634.111186313196 43942.290104546555 54028.93388134296 64247.19724917069 52239.065844647506 1.1776435341613272 1.2106344150297035 1.241452578350259 0.9741080550639084 1.0750173956103362 0.8927056874446655 0.8411767973651265 1.0342630176814092 1.2298688004918363 1.0 15.672841477939452 -5.262467095082317 24.965103028054887 0.9993575859639382 1.2099826071186461 0.4653812962827403 0.09957337168123072 82.81229182991596 2011686.533998874 0.02958924905977181 0.04681561884668048 5.464279491772809e-06 5.262467095082317 0.21062502115470794 IKEWVDK ddPTM_KYSE-520_SHP099_60min_R1 2 IKEWVDK 7 1 J3KQ32;Q9NTK5;Q9NTK5-2;C9JCJ9 J3KQ32 OLA1 Obg-like ATPase 1 0 ; 118.26 0.0028702 2297600000.0 3399500.0 2814600.0 1859130.0 1853710.0 3022400.0 3317800.0 2469960.0 2898900.0 2429610.0 2876900.0 False True 3210922.958264759 2679382.3911992665 1978972.494513172 2029886.0410617662 3260245.68489638 3297092.379524579 2719647.6612866055 2888844.392508346 1988454.0694839219 2851412.9041943285 1.1260813730419763 0.939668326273613 0.6940322433142435 0.7118877936183409 1.143379017504155 1.156301276000635 0.9537894905666237 1.0131273475893152 0.6973574632277828 1.0 21.44324553588909 -4.269461401433651 6.024444753501307 0.9246254225347463 1.1307265612719792 0.12248872279491885 0.16311314485555206 0.2941067819389293 51.92823495475039 0.044023629626551604 0.24658282262572548 5.376982197256156e-05 4.269461401433651 0.2061011387372329 IKEY(ph)NAQINS(ph)NLFMS(ph)LNKDGS(ph)YTGFIK ddPTM_KYSE-520_SHP099_60min_R1 1 IKEYNAQINSNLFMSLNKDGSYTGFIK 27 2 Q9NS23-4;Q9NS23-2;Q9NS23-5;Q9NS23 Q9NS23-4 RASSF1 Ras association domain-containing protein 1 4 IKEY(0.911)NAQINS(0.915)NLFMS(0.549)LNKDGS(0.549)Y(0.527)T(0.549)GFIK 49.593 0.045438 44126000.0 28921.0 27348.0 23332.0 18708.0 23560.0 29958.0 27002.0 25088.0 34892.0 24403.0 True False 27316.69447741583 26034.1610298151 24836.018052519943 20486.002695234707 25414.037961937087 29771.021009644148 29731.625674124632 25000.975583583207 28556.49235574148 24186.808405246713 1.1294046746362023 1.076378519795429 1.0268414764112657 0.8469907377606212 1.0507396236877684 1.23087844046369 1.2292496461697324 1.0336616210247849 1.1806639337146638 1.0 14.561932789144041 -6.016551508046403 24.777441772668404 1.142660583766885 1.0149872987006232 0.24137853100273254 0.09704674676429095 898.4564025796176 1344979.8483165295 0.03273778764434222 0.03357105736585418 9.62605839552555e-07 6.016551508046403 -0.12767328506626185 IKFPLPHR ddPTM_KYSE-520_SHP099_60min_R1 2 IKFPLPHR 8 1 Q02543;M0R0P7;M0R3D6;M0R1A7 Q02543 RPL18A 60S ribosomal protein L18a 0 ; 98.39200000000001 0.0032814999999999997 1010820000.0 2778180.0 2044420.0 2179720.0 1857560.0 2936740.0 2194820.0 1942720.0 1873040.0 1835720.0 1341920.0 False True 2624068.817235473 1946202.9944630172 2320228.2388753104 2034101.9439042208 3167844.730235109 2181121.314252862 2139109.0967200757 1866542.8614108209 1502399.522735349 1330031.6327979632 1.972937148656583 1.4632757195171557 1.7444910193558996 1.5293635833496064 2.3817814946032314 1.6399018342627512 1.6083144520556034 1.403382307144236 1.1295968349074363 1.0 20.343029127786014 -7.486843128662409 1.3534173263944071 1.009584362896853 1.7833073986551589 0.5870106999824694 0.24172346435908687 0.320482283211762 1.0394819664803256 0.22039854333838324 0.07495546957489464 3.2595441760647286e-08 7.486843128662409 0.7737230357583058 IKGEHPGLSIGDVAK ddPTM_KYSE-520_SHP099_60min_R1 2 IKGEHPGLSIGDVAK 15 1 P09429;Q5T7C4;B2RPK0 P09429 HMGB1;HMGB1P1 High mobility group protein B1;Putative high mobility group protein B1-like 1 0 ; 172.91 2.4872999999999997e-08 3337800000.0 6717200.0 6646100.0 4785700.0 5583700.0 6267000.0 6191700.0 5287900.0 5825400.0 6530900.0 5439700.0 False True 6344583.52559378 6326811.380000518 5094193.879390731 6114373.169199385 6760177.245647691 6153055.303605509 5822452.536930733 5805193.047058581 5345053.190591308 5391508.4900225615 1.1767733533824465 1.1734770318379009 0.9448550231939659 1.1340746621311169 1.2538563665730966 1.1412493024896935 1.0799301434293704 1.0767289076520195 0.9913836174945801 1.0 22.362257550389927 -7.445937318716453 1.5766335549001673 0.9942648864884505 1.1330211891819935 0.3410305722612351 0.07464864199492553 0.5233005601108756 2.2980064266997284 0.07003289093539966 0.023915729238068284 3.581481245293124e-08 7.445937318716453 0.138756302693543 IKGS(ph)SPGIQDTLEAEDGAFETDEAPEDR ddPTM_KYSE-520_SHP099_60min_R1 4 IKGSSPGIQDTLEAEDGAFETDEAPEDR 28 1 Q9UNX4 Q9UNX4 WDR3 WD repeat-containing protein 3 1 IKGS(0.495)S(0.495)PGIQDT(0.01)LEAEDGAFETDEAPEDR;IKGS(0.5)S(0.5)PGIQDTLEAEDGAFETDEAPEDR;IKGS(0.601)S(0.399)PGIQDTLEAEDGAFETDEAPEDR;IKGS(0.5)S(0.5)PGIQDTLEAEDGAFETDEAPEDR 209.25 2.3599e-22 2032570000.0 906056.0 919943.0 725188.0 653475.0 688103.0 830587.0 692533.0 790652.0 1043462.0 893656.0 True False 855795.2675021442 875747.5574174046 771934.7788218246 715581.0675255767 742252.7913294905 825402.9984423968 762540.9941107534 787909.4127515636 853995.604336429 885738.9030938465 0.9661936091018352 0.9887197619506803 0.8715150436832918 0.807891654104933 0.8380040537192558 0.9318807106239783 0.8609094524890255 0.8895504194288307 0.9641617878061587 1.0 19.756521960208836 -7.888136177984313 3.4572429680285865 0.99869105020853 0.8919545504470234 0.31509370000111014 0.05282987273350673 0.288240724499749 6.35711747929042 0.056265732987259495 0.015041753346035525 1.293790095210876e-08 7.888136177984313 -0.10673649976150656 IKGSS(ph)PGIQDTLEAEDGAFETDEAPEDR ddPTM_KYSE-520_SHP099_60min_R1 2 IKGSSPGIQDTLEAEDGAFETDEAPEDR 28 1 Q9UNX4 Q9UNX4 WDR3 WD repeat-containing protein 3 1 IKGS(0.186)S(0.812)PGIQDT(0.003)LEAEDGAFETDEAPEDR;IKGS(0.15)S(0.85)PGIQDTLEAEDGAFETDEAPEDR 308.15 1.3215999999999999e-64 1277800000.0 784930.0 841170.0 612470.0 573680.0 551970.0 697240.0 571730.0 665230.0 861560.0 789370.0 True False 741388.3681808381 800758.9305780897 651950.7961866478 628202.3747168184 595406.8987203059 692888.2665319549 629526.0479470894 662922.4723958496 705122.4221601689 782376.7959205665 0.9476103739867434 1.0234952451981838 0.8332951585297774 0.8029409588734772 0.761023207519509 0.8856196530172946 0.8046328204383559 0.8473186779725955 0.9012568187563667 1.0 19.577504057269454 -4.768371639750324 24.999871583357038 0.8432070282438445 0.9855528199090215 0.38302331139431867 0.0652767732488175 125.03258005937106 450911.8945639628 0.016275333050113357 0.03509827548113202 1.7046230639386478e-05 4.768371639750324 0.14234579166517702 IKKPEGKPDQK ddPTM_KYSE-520_SHP099_60min_R1 2 IKKPEGKPDQK 11 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2;H0Y8T4;D6RBK5 D6REM6 MATR3 Matrin-3 0 ; 67.997 0.013704 4768100000.0 11550600.0 9601600.0 7776800.0 8418900.0 7062300.0 10341500.0 6898500.0 11549000.0 8908400.0 6661800.0 False True 10909865.192449749 9140324.723704569 8278104.9713199455 9219029.724765407 7618062.831009692 10276954.862515362 7595867.702871967 11508939.214556865 7290859.1224890305 6602781.634801965 1.6523134938986914 1.3843142525761738 1.2537299321982238 1.3962342289458298 1.1537656782190673 1.556458388438526 1.1504041967457534 1.7430440458450887 1.1042102443703945 1.0 22.65464250368952 -12.206151824698505 0.3361084385388296 4.983781890613308e-10 1.3941381076420625 0.2444220804093198 0.2059255751914004 141.26810049870113 3.7321971784705856 99.46972800882845 0.1616417090058306 6.220827736778985e-13 12.206151824698505 1.3941381071436842 IKLNGLENR ddPTM_KYSE-520_SHP099_60min_R1 1 IKLNGLENR 9 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 114.89 0.0036989000000000006 0.0 327800.0 303070.0 246070.0 194550.0 287960.0 311510.0 208420.0 242780.0 267930.0 244270.0 False True 309616.28054690023 288510.0622826556 261932.06592592085 213039.97350640967 310620.81373172294 309565.7505412323 229489.12758318137 241937.85284527778 219280.66596566007 242105.95783918444 1.2788461849937562 1.1916685770876174 1.0818902114747033 0.8799451917987022 1.282995331895337 1.27863747469964 0.947887154993585 0.9993056552783458 0.905721891037949 1.0 17.885279056620774 -6.783516184915687 24.996720630378867 0.9631707102333692 1.1553840158776967 0.4189990515469295 0.11640427258119758 277.19469984988007 313853.85853942204 0.05262620821771439 0.03551227196267517 1.646204615838033e-07 6.783516184915687 0.19221330564432748 IKLQT(ph)PNT(ph)FPK ddPTM_KYSE-520_SHP099_60min_R1 2 IKLQTPNTFPK 11 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 2 IKLQT(1)PNT(1)FPK;IKLQT(1)PNT(1)FPK 110.98 0.00024906 915720000.0 1421150.0 1442550.0 1388950.0 1357690.0 1430670.0 1358980.0 1233370.0 1185150.0 1693800.0 1342140.0 True False 1342315.9765077126 1373247.7326883052 1478483.9393985735 1486724.4493956163 1543255.5896012092 1350498.1017319642 1358051.076131216 1181038.9912660902 1386248.6172232882 1330249.6837691187 1.009070697693688 1.0323232919682839 1.1114334079068893 1.1176281171389895 1.1601247558492638 1.0152215168399616 1.0208993790423802 0.8878325668304192 1.0420965583660222 1.0 20.343265629883362 -6.606873628048469 2.796485062280604 0.976423371666706 1.086079521555623 0.4017402585220786 0.0559426327940592 0.26483905876767255 4.195425026159902 0.024504854014646978 0.01831429597825597 2.472443477327224e-07 6.606873628048469 0.10965614988891692 IKNENTEGS(ph)PQEDGVELEGLK ddPTM_KYSE-520_SHP099_60min_R1 12 IKNENTEGSPQEDGVELEGLK 21 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 IKNENT(0.001)EGS(0.999)PQEDGVELEGLK;IKNENT(0.005)EGS(0.995)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENT(0.047)EGS(0.953)PQEDGVELEGLK;IKNENT(0.001)EGS(0.999)PQEDGVELEGLK;IKNENT(0.017)EGS(0.983)PQEDGVELEGLK;IKNENT(0.111)EGS(0.889)PQEDGVELEGLK;IKNENT(0.001)EGS(0.999)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENTEGS(1)PQEDGVELEGLK;IKNENT(0.002)EGS(0.998)PQEDGVELEGLK;IKNENT(0.001)EGS(0.999)PQEDGVELEGLK 315.57 5.45e-54 76344830000.0 18981260.0 19145220.0 17296080.0 17627350.0 17538190.0 16989380.0 17713170.0 17369220.0 20724570.0 17734820.0 True False 17928331.66959629 18225454.893638898 18411012.991506487 19302648.044143982 18918345.77434913 16883342.977529485 19503790.087479968 17308970.22982641 16961510.511894662 17577703.292281166 1.0199473373446402 1.0368507529446225 1.04740720021092 1.098132544575393 1.0762694909440573 0.9604976655251319 1.1095755664532463 0.9847117078957202 0.9649446363873322 1.0 24.06724324406174 -7.419196525558763 10.916958130381833 0.9799359856544626 1.0486449014444235 0.36331010998997415 0.04035633902397419 0.5462665982946681 54.16692136191754 0.021823757396502427 0.010467947488296991 3.808934237082188e-08 7.419196525558763 0.06870891578996086 IKPNLSS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 IKPNLSSSPR 10 1 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 IKPNLS(0.067)S(0.473)S(0.459)PR;IKPNLS(0.111)S(0.826)S(0.063)PR 103.88 0.0010171 1103300000.0 1599440.0 1336470.0 1338870.0 1192670.0 1332440.0 1268690.0 1344060.0 1433730.0 1640200.0 1356790.0 True False 1510715.874795407 1272263.9751176306 1425175.7024677428 1306020.9982106886 1437295.447453456 1260771.6351133408 1479930.7015615136 1428756.7252650964 1342381.0260772442 1344769.8961666483 1.1234010213210441 0.9460830278431274 1.0597914978096226 0.9711854808273029 1.0688040024918446 0.9375370750841837 1.1005085002126755 1.0624544238667581 0.9982235844985721 1.0 20.358927903400243 IKPNLSSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 IKPNLSSSPR 10 1 Q96JN0-3;A0A1P0AZG4 Q96JN0-3 LCOR Ligand-dependent corepressor 1 IKPNLS(0.001)S(0.075)S(0.923)PR 115.14 0.00039419 1191800000.0 1388800.0 1115600.0 1180300.0 1036400.0 980710.0 956260.0 1063200.0 1168900.0 1228500.0 1115300.0 True False 1311760.495495839 1062004.9014502598 1256384.026546773 1134899.1443949777 1057886.2975234012 950291.6266333628 1170678.6318320618 1164845.3587233098 1005435.3679648171 1105419.30969027 1.186663272476563 0.9607258459668353 1.1365678304450844 1.0266684636737236 0.9570000164189395 0.8596662083817109 1.0590358080139535 1.053758830257534 0.9095511170747798 1.0 20.076162288500626 -5.526307057495229 5.161623540367813 0.9753019991294134 1.0818729772590328 0.324817565792915 0.07778256170841688 0.23381873063509417 18.979006354689133 0.022833805561752386 0.03142369371297852 2.9764112851223625e-06 5.526307057495229 0.10657097812961935 IKPSSS(ph)ANAIYSLAAR ddPTM_KYSE-520_SHP099_60min_R1 2 IKPSSSANAIYSLAAR 16 1 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 IKPS(0.002)S(0.059)S(0.939)ANAIYSLAAR;IKPSS(0.001)S(0.999)ANAIYSLAAR 207.34 5.2942999999999996e-14 3281400000.0 2566800.0 1372420.0 1340980.0 1584540.0 1406520.0 1688830.0 1461020.0 1716300.0 1699540.0 1530780.0 True False 2424414.4872110556 1306486.8831555825 1427421.7164438614 1735134.2051906784 1517205.121995913 1678289.3855303202 1608714.159781113 1710346.5558874307 1390946.3779169098 1517218.480128818 1.5979336654304481 0.8611066239086782 0.9408148761295523 1.1436284410689215 0.999991195643159 1.1061619717338447 1.0603048808399214 1.1272908801784536 0.9167739492593135 1.0 20.532997418589282 -4.2510904772368034 24.9969632544804 1.0264503350225898 1.597933982838252 0.7919561594017819 0.08916289601546039 676.1377596186236 1633127.030623207 0.02247141681272873 0.3095024913495265 5.6093110421991544e-05 4.2510904772368034 0.5714836478156622 IKPSSS(ph)ANAIYSLAARPLPVPK ddPTM_KYSE-520_SHP099_60min_R1 2 IKPSSSANAIYSLAARPLPVPK 22 2 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 IKPS(0.003)S(0.346)S(0.651)ANAIYSLAARPLPVPK;IKPS(0.004)S(0.286)S(0.711)ANAIYSLAARPLPVPK 229.98 1.6619e-20 4561600000.0 2210800.0 1916700.0 1908890.0 1306560.0 1403440.0 1616630.0 1188120.0 1433440.0 1888500.0 1130410.0 True False 2088162.5168794636 1824618.854974645 2031940.1037319906 1430735.0695684124 1513882.7435187174 1606540.0125115507 1308226.7645337747 1428467.7312074113 1545596.0052108748 1120395.4468456735 1.8637727623388791 1.6285489735892984 1.813591896908053 1.276991149505703 1.3512039412341916 1.4339044460012342 1.1676473411391626 1.2749674547759677 1.3795093594518772 1.0 20.09557659491946 -1.0000000000024245 0.21095932261635947 1.073838048032432 5.179396218154441 0.7541345622651913 0.12963043920793074 25.389516412922703 0.316648048889558 0.21795185090547609 35.03788644143127 0.09999999999944174 1.0000000000024245 4.105558170122009 IKPSSSANAIY(ph)SLAAR ddPTM_KYSE-520_SHP099_60min_R1 1 IKPSSSANAIYSLAAR 16 1 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 IKPSSSANAIY(0.99)S(0.01)LAAR 113.11 0.0028799 0.0 354430.0 281060.0 278710.0 291090.0 283180.0 275980.0 271740.0 305010.0 296300.0 294820.0 True False 334769.0613613116 267557.455720339 296676.0925517674 318755.1060806 305464.6549262032 274257.50645041664 299210.131126829 303951.991499869 242499.3891151608 292208.1241664891 1.1456528195998166 0.9156400304869516 1.015290363325876 1.0908495682309827 1.0453667426171938 0.9385690669372188 1.0239623965976745 1.0401900781057294 0.8298858555246528 1.0 18.15663676391214 -7.73587744608329 24.995074154596946 0.9149427987954001 1.0225414006981188 0.2706787428954589 0.07325174775779836 253.01430750178176 247404.65217083748 0.04736244008706374 0.0178875754728923 1.8370566707427257e-08 7.73587744608329 0.10759860190271875 IKPSSSANAIY(ph)SLAARPLPVPK ddPTM_KYSE-520_SHP099_60min_R1 1 IKPSSSANAIYSLAARPLPVPK 22 2 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 IKPSSSANAIY(0.97)S(0.03)LAARPLPVPK 120.99 7.5548e-06 277250000.0 603260.0 529530.0 500580.0 422870.0 478200.0 402330.0 284850.0 436390.0 484780.0 391760.0 True False 569795.9652310043 504090.58395926596 532848.1877563182 463059.43765949877 515831.61941418936 399818.90923326404 313645.41786809906 434876.26494419173 396756.1723093075 388289.3111846678 1.4674521003232384 1.298234510811769 1.3722968220026515 1.192562927490092 1.3284723646921697 1.0296933181431638 0.807762173290759 1.1199800056751175 1.0218055477726322 1.0 18.56677246776839 -6.290403590632955 4.752070315105198 0.9879807162143373 1.325835403702365 0.7535300586882028 0.09618380407420662 0.10398488599636115 6.1394617739407655 0.03452910247912357 0.03131155052134901 5.123850023822548e-07 6.290403590632955 0.3378546874880277 IKPSSSANAIYS(ph)LAARPLPVPK ddPTM_KYSE-520_SHP099_60min_R1 1 IKPSSSANAIYSLAARPLPVPK 22 2 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 IKPSSSANAIY(0.443)S(0.557)LAARPLPVPK 104.88 0.00010424 328770000.0 822400.0 634290.0 615330.0 549550.0 572160.0 505400.0 415640.0 543570.0 584350.0 525250.0 True False 776779.8325862446 603817.7563112994 654995.1563628104 601779.0667717677 617185.7368549207 502245.61113138875 457656.94745549065 541684.4825401917 478246.77026474633 520596.69363831705 1.4920952093597235 1.1598570711069478 1.2581623440310712 1.155941007934737 1.1855352605902423 0.9647499057693254 0.8791007569737782 1.0405069589560731 0.9186511864345547 1.0 18.9898066235074 -4.09506745295632 0.3877144243720005 0.9331368450750119 1.8406775773068687 0.7694184618752526 0.08399882009148818 3.2741294763663666 0.35354799598979153 0.07285703170326609 1.4265401815041567 8.034013312757322e-05 4.09506745295632 0.9075407322318567 IKPTGLLTIPS(ph)PQI ddPTM_KYSE-520_SHP099_60min_R1 1 IKPTGLLTIPSPQI 14 1 Q8TEA7-3;Q8TEA7-2;Q8TEA7 Q8TEA7-3 TBCK TBC domain-containing protein kinase-like protein 1 IKPTGLLTIPS(1)PQI 72.898 0.029442000000000003 527060000.0 608400.0 740310.0 509810.0 433360.0 467430.0 630140.0 390040.0 623750.0 775380.0 673190.0 True False 574650.8391846683 704744.396372035 542673.1683248413 474546.4041055651 504214.0816871078 626207.0625214354 429469.04962356767 621586.3568343447 634590.5377391613 667226.0603338947 0.8612535890715963 1.056230321728389 0.8133272972780404 0.7112228258412023 0.7556870327198969 0.938523087974213 0.6436634825214289 0.9315978403530718 0.9510877579056162 1.0 19.34781611271015 -7.502325896270082 24.421896945040345 0.9641436211499869 0.8282133828321502 0.2471174297554406 0.10951477950702009 855.9480262361618 1017086.8354398499 0.06388352208657706 0.03008430786679409 3.1453871175474615e-08 7.502325896270082 -0.13593023831783668 IKQHLENDPGS(ph)NEDTDIPK ddPTM_KYSE-520_SHP099_60min_R1 3 IKQHLENDPGSNEDTDIPK 19 1 K7EML9;K7ER96;O43396 K7EML9 TXNL1 Thioredoxin-like protein 1 1 IKQHLENDPGS(0.999)NEDT(0.001)DIPK;IKQHLENDPGS(0.999)NEDT(0.001)DIPK;IKQHLENDPGS(1)NEDTDIPK 150.06 9.2448e-07 1385220000.0 2378130.0 2484650.0 2304320.0 1831230.0 1908810.0 2133020.0 1852290.0 1923040.0 2743890.0 2164720.0 True False 2246210.3882153747 2365283.684464315 2452860.154242359 2005269.5486206245 2059022.4873567512 2119707.030976405 2039537.5498083234 1916369.4230809119 2245668.7438379973 2145542.264926674 1.0469196645222654 1.1024176606211722 1.1432355327319492 0.9346213222647267 0.9596746337817402 0.9879586459923911 0.9505930426768017 0.893186517183993 1.0466672134816908 1.0 21.032910890265768 -5.265820155783673 24.999407493628965 0.9628965378692499 1.098013625590275 0.6441862282620727 0.04417923563806809 212.67990765158206 1213683.282715639 0.012050702554810756 0.018585430313538518 5.422253830325527e-06 5.265820155783673 0.13511708772102515 IKQS(ph)IDS(ph)KCR ddPTM_KYSE-520_SHP099_60min_R1 1 IKQSIDSKCR 10 2 Q8N9N5-3;Q8N9N5-6;Q8N9N5-2;Q8N9N5-4;Q8N9N5-5;Q8N9N5-7;Q8N9N5 Q8N9N5-3 BANP Protein BANP 2 IKQS(1)IDS(1)KCR 45.368 0.050684 1479300000.0 1589200.0 1272600.0 1288000.0 823940.0 1217000.0 1267600.0 1239500.0 1255700.0 1470700.0 1279700.0 True False 1501043.9080083435 1211462.385788457 1371026.5408728633 902247.0098734066 1312770.976217207 1259688.438207656 1364800.7563542507 1251344.269782584 1203657.953329961 1268362.8535915355 1.1834499124268274 0.9551386516548026 1.0809418905564934 0.7113477088347203 1.0350121595724158 0.9931609354852069 1.076033370489871 0.9865822435900253 0.9489854972665321 1.0 20.27453610044051 -4.257774215276554 24.4160657546513 0.976396424777786 1.1834500233796248 0.28531044852785103 0.09833060808847682 345.5079756391556 2301517.965250868 0.024242285887030153 0.17300899238635722 5.523645326355721e-05 4.257774215276554 0.2070535986018388 IKQS(ph)SQDNELK ddPTM_KYSE-520_SHP099_60min_R1 2 IKQSSQDNELK 11 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IKQS(0.807)S(0.193)QDNELK;IKQS(0.752)S(0.248)QDNELK 211.51 2.0623000000000002e-09 2470040000.0 4417550.0 4097120.0 3774660.0 3389130.0 3677240.0 3861240.0 3586210.0 3502910.0 4560870.0 3613250.0 True False 4172499.695332403 3900288.2052975004 4017980.6232695435 3711231.8962209146 3966617.867366445 3837140.5689057442 3948739.104836769 3490759.2227953384 3732730.9781763908 3581239.4160659662 1.165099344270019 1.0890889304412976 1.121952529966104 1.036298182012569 1.1076103567864282 1.0714560304713971 1.1026180174165807 0.9747349498989873 1.0423014338083099 1.0 21.77202753948364 -1.0000000000000002 0.1325150499583961 0.968274747662877 1.5617910953505592 0.5750980413229382 0.0359721208300093 59.780219667958754 0.5351219268879018 0.18136900769743414 6.651779146706839 0.09999999999999995 1.0000000000000002 0.5935163476876821 IKQSS(ph)QDNELK ddPTM_KYSE-520_SHP099_60min_R1 4 IKQSSQDNELK 11 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IKQS(0.011)S(0.989)QDNELK;IKQS(0.065)S(0.935)QDNELK;IKQS(0.033)S(0.967)QDNELK;IKQS(0.089)S(0.911)QDNELK 184.17 1.7165e-06 4654460000.0 7311500.0 6719500.0 6694950.0 5970550.0 6238770.0 6521530.0 5544580.0 6279910.0 8118300.0 6468510.0 True False 6905916.519886096 6396685.133824866 7126517.189298749 6537989.27688869 6729725.70525443 6480826.712231268 6105080.256286129 6258126.4579520095 6644221.365688862 6411204.033824622 1.0771637407656096 0.997735386376232 1.1115723585929 1.0197755745091197 1.0496820362835642 1.0108595324746064 0.952251749293358 0.9761234278202665 1.0363453308668502 1.0 22.61216389192591 -6.386502561366491 3.5677642911702656 0.9883984949546696 1.0499896090416545 0.3984520012439092 0.03485555723733286 0.24792086162750956 5.741284228780913 0.012622009380814064 0.010929196053616913 4.106742178079386e-07 6.386502561366491 0.06159111408698492 IKT(ph)GSPGSEVVTLQQFLEESNK ddPTM_KYSE-520_SHP099_60min_R1 2 IKTGSPGSEVVTLQQFLEESNK 22 1 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 IKT(0.426)GS(0.426)PGS(0.145)EVVT(0.002)LQQFLEESNK;IKT(0.478)GS(0.478)PGS(0.044)EVVTLQQFLEESNK 228.25 1.2750000000000002e-19 1164960000.0 481190.0 458560.0 423610.0 389530.0 386100.0 423505.0 373510.0 428990.0 563170.0 424300.0 True False 454497.43147151644 436530.0892874069 450916.5783999642 426550.81408353505 416483.8733915075 420861.7482037971 411268.0359063148 427501.93381701875 460912.52436039527 420541.03210040537 1.0807445570804703 1.0380202072248306 1.0722296850508195 1.0142905959808812 0.9903525259149285 1.0007626273750028 0.9779498420218918 1.016552253371917 1.0959989375076036 1.0 18.681887045237726 -5.274068305157542 19.952088447218188 1.0113890122070162 1.0611003427844319 0.34057623579591845 0.03168550129608694 59.634468120816734 94215.56913012028 0.009196757284009255 0.013819978390779137 5.320245766920847e-06 5.274068305157542 0.049711330577415724 IKTEPS(ph)SPLSDPSDIIR ddPTM_KYSE-520_SHP099_60min_R1 3 IKTEPSSPLSDPSDIIR 17 1 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 IKTEPS(0.66)S(0.339)PLSDPSDIIR;IKT(0.001)EPS(0.582)S(0.416)PLSDPSDIIR;IKTEPS(0.644)S(0.254)PLS(0.102)DPSDIIR 116.35 0.00014275 2826940000.0 2479100.0 2459190.0 2357860.0 1705920.0 1833030.0 2197300.0 1763270.0 1990270.0 2897190.0 2089660.0 True False 2341579.38103667 2341046.8210805575 2509851.428309391 1868050.1238964486 1977279.0324859715 2183585.8356529507 1941518.5394568483 1983366.2179025088 2371133.3282165146 2071147.238130881 1.130571181964756 1.1303140491321366 1.2118169978945683 0.9019397991145629 0.9546781590817167 1.0542880754453463 0.9374121277871983 0.9576171994862177 1.1448405427498036 1.0 20.981998687909446 -5.254840559270353 24.971950513538168 0.9898468024145207 1.1548420770490877 0.5554224743612379 0.06743018453394609 385.1833682411294 1457648.0850979385 0.018407291549104022 0.030973807861753275 5.561083815592305e-06 5.254840559270353 0.16499527463456698 IKTGS(ph)PGSEVVTLQQFLEESNK ddPTM_KYSE-520_SHP099_60min_R1 1 IKTGSPGSEVVTLQQFLEESNK 22 1 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 IKT(0.433)GS(0.547)PGS(0.02)EVVTLQQFLEESNK 82.84899999999999 0.0028136999999999997 26076000.0 18205.0 17116.0 17879.0 15418.0 15796.0 14530.0 11143.0 16068.0 18223.0 16075.0 True False 17195.132359232233 16293.721668360224 19031.508947411436 16883.322084409276 17039.055333054235 14439.31288037016 12269.443185200022 16012.263858299399 14914.162564446773 15932.58800616076 1.0792428921518133 1.0226663528900528 1.1945020444922316 1.0596722941609291 1.0694468046538095 0.9062754195857455 0.7700847583867552 1.0050008104212467 0.9360790951651932 1.0 13.959693009274936 -6.228307909756934 5.228477109359844 0.9138695117776635 1.0877319313059055 0.5479592508003827 0.07321389303879708 0.1492575873551467 11.302993031324515 0.025284874435678964 0.02464315308400592 5.911423724727218e-07 6.228307909756934 0.173862419528242 IKVEPVALAPS(ph)PVIPR ddPTM_KYSE-520_SHP099_60min_R1 1 IKVEPVALAPSPVIPR 16 1 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 IKVEPVALAPS(1)PVIPR 83.60600000000001 0.0027555999999999995 616740000.0 888990.0 904860.0 803220.0 606600.0 795030.0 845000.0 583290.0 761940.0 988130.0 963890.0 True False 839675.9525423705 861389.1673774492 854996.8463974401 664251.08161906 857594.3378980822 839726.0415631642 642254.6455618163 759297.0079781326 808710.5007302202 955350.6844950726 0.8789190882154032 0.9016470929025561 0.8949560201020088 0.6952955520936627 0.897674908090261 0.87897151819908 0.672271089543694 0.7947835494349811 0.8465064335591538 1.0 19.865670880793104 IKVPVDWSK ddPTM_KYSE-520_SHP099_60min_R1 1 IKVPVDWSK 9 1 P13797;A0A0A0MSQ0;P13797-3;P13797-2;H7C4N2 P13797 PLS3 Plastin-3 0 118.28 0.0032402 0.0 2238400.0 1786400.0 1303200.0 1083200.0 1754900.0 1813700.0 1297200.0 1415700.0 1378500.0 1373400.0 False True 2114231.4898602283 1700578.6625589333 1387206.357193725 1186147.002324045 1893000.6459848655 1802380.0255421468 1428333.6354519832 1410789.2671268631 1128199.1491571018 1361232.7444890302 1.5531741345627512 1.2492930907251165 1.0190809490954793 0.8713770713540191 1.3906517115818033 1.3240792456977746 1.0492942086756374 1.036405620448423 0.8288069426221429 1.0 20.37648233022383 -4.379122346854315 2.7684620587712994 1.0806402047113135 1.58492330691967 0.44525764942553614 0.16670171598905523 0.35130725446068334 4.192408270299814 0.04674316061012132 0.3499529142347727 4.1771267454331655e-05 4.379122346854315 0.5042831022083565 IKWDEQTSNTKGDDDEES(ph)DEEAVK ddPTM_KYSE-520_SHP099_60min_R1 7 IKWDEQTSNTKGDDDEESDEEAVK 24 2 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 IKWDEQTSNTKGDDDEES(1)DEEAVK;IKWDEQTSNTKGDDDEES(1)DEEAVK;IKWDEQTSNTKGDDDEES(1)DEEAVK;IKWDEQTSNTKGDDDEES(1)DEEAVK;IKWDEQTSNTKGDDDEES(1)DEEAVK;IKWDEQTSNTKGDDDEES(1)DEEAVK;IKWDEQTSNTKGDDDEES(1)DEEAVK 320.67 3.1083999999999995e-61 11097550000.0 4121080.0 3944260.0 3522820.0 3458040.0 3574670.0 3540840.0 3456950.0 3643310.0 4590560.0 3854100.0 True False 3892475.4772306886 3754771.8291450436 3749906.613911292 3786691.0819023666 3855976.191909915 3518740.3041520943 3806412.242580743 3630672.2079649437 3757030.0226003835 3819955.672444429 1.018984462387715 0.982935968663303 0.981662337330655 0.9912918909551702 1.009429564778807 0.9211468943304298 0.9964545583705637 0.9504487798523692 0.9835271256423301 1.0 21.865124466350736 IKWDEQTSNTKGDDDEES(ph)DEEAVKK ddPTM_KYSE-520_SHP099_60min_R1 6 IKWDEQTSNTKGDDDEESDEEAVKK 25 3 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 IKWDEQTSNTKGDDDEES(0.999)DEEAVKK;IKWDEQTSNTKGDDDEES(1)DEEAVKK;IKWDEQTSNTKGDDDEES(1)DEEAVKK;IKWDEQTSNTKGDDDEES(1)DEEAVKK;IKWDEQTSNTKGDDDEES(1)DEEAVKK;IKWDEQTSNTKGDDDEES(0.999)DEEAVKK 264.01 1.2098e-37 31183800000.0 16904490.0 16696420.0 16828460.0 14493460.0 13482120.0 12834310.0 12616920.0 12475120.0 17548690.0 12619140.0 True False 15966764.241434658 15894298.921362653 17913249.458088025 15870914.080782354 14543086.14123051 12754206.310644442 13892361.402873015 12431846.720434906 14362290.262474976 12507344.23714237 1.2765910922975192 1.2707972707876891 1.4322184724789166 1.268927582056259 1.1627637222970733 1.0197373694064469 1.1107363113599797 0.9939637451983402 1.1483085449766448 1.0 23.576272149746107 -5.86916091669476 2.453358306885493 1.0583397729005168 1.3236192487223002 0.7941225071772654 0.06197196692614634 0.12250493187989418 1.5026872386089287 0.020393773549010424 0.02416199896050574 1.351571680143034e-06 5.86916091669476 0.26527947582178335 IKWGDAGAEYVVESTGVFTTMEK ddPTM_KYSE-520_SHP099_60min_R1 6 IKWGDAGAEYVVESTGVFTTMEK 23 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;;;; 229.2 1.4415e-21 5774760000.0 6168445.0 6187533.0 4844182.0 7469525.0 4750181.0 3613123.0 3874191.0 4671121.0 5165888.0 2360016.0 False True 5826269.059359745 5890274.627003617 5156445.722685249 8179426.410205421 5123993.219867247 3590572.159137075 4265832.034740489 4654917.971498836 4227892.960639018 2339108.0943046627 2.4908079594721326 2.518171195826927 2.20444952297858 3.4968142045769315 2.190575643914582 1.5350176282487833 1.8237002578577182 1.9900397005306352 1.8074807961774964 1.0 21.157527102033725 -5.999988408742141 24.999999998653355 1.7226692878464274 2.658796247755456 0.5993053236868728 0.4003812862604526 0.3134963615610495 670653.8194615981 0.12252615131672241 0.1375441383262152 1.0000266902137333e-06 5.999988408742141 0.9361269599090285 IKYFGFDDLS(ph)ES(ph)EDDEDDDCQVER ddPTM_KYSE-520_SHP099_60min_R1 4 IKYFGFDDLSESEDDEDDDCQVER 24 1 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 2 IKY(0.001)FGFDDLS(1)ES(1)EDDEDDDCQVER;IKY(0.001)FGFDDLS(0.999)ES(1)EDDEDDDCQVER;IKY(0.002)FGFDDLS(0.999)ES(0.999)EDDEDDDCQVER;IKYFGFDDLS(1)ES(1)EDDEDDDCQVER 148.13 4.8923e-07 885070000.0 1083337.0 1019170.0 955128.0 884367.0 932903.0 1000970.0 877494.0 910106.0 1268391.0 978477.0 True False 1023242.1370312305 970207.5433946429 1016697.0791388326 968416.973785365 1006317.1586080213 994722.5749390309 966199.657036159 906949.0547063362 1038083.1679350935 969808.4550235865 1.055097150092741 1.000411512571363 1.0483483350473632 0.9985651999309619 1.0376452725229612 1.0256897326336865 0.9962788548927016 0.9351836953043253 1.0704002038318448 1.0 19.88734030598857 -6.763374951228992 7.261879845429313 0.9949618192091048 1.0265171444146588 0.11898809625577578 0.0348861547309045 0.24273656971833973 75.1327632140537 0.013275727613006215 0.009526152914355818 1.724348520596827e-07 6.763374951228992 0.03155532520555404 IKYPENFFLLR ddPTM_KYSE-520_SHP099_60min_R1 1 IKYPENFFLLR 11 1 P62136-3;P62136;P62136-2;E9PMD7;F8VR82;F8VYE8;F8W0W8;P36873;P36873-2;E7ETD8;C9J9S3;C9JP48;A0A087WYY5;P62140 P62136-3;P62140 PPP1CA;PPP1CC;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit 0 62.633 0.048943 28388000.0 92182.0 88654.0 83576.0 66475.0 112490.0 90695.0 75187.0 72529.0 85732.0 70403.0 False True 87068.48069973888 84394.9287676331 88963.44268632804 72792.76401356242 121342.32301945264 90128.938863398 82787.63571440672 72277.41382739591 70165.22992784673 69779.28419270525 1.247769760138082 1.2094553526024243 1.274926272396877 1.0431858803901604 1.7389447946234136 1.2916288824989137 1.1864213952922917 1.0358004479924403 1.0055309500463723 1.0 16.09051117775627 -7.107263800763454 2.5306325087692345 1.0090563181914651 1.3021179070681632 0.3792301915033972 0.16456973551848827 0.3377266256031735 4.1807741352594086 0.09784348404268003 0.04970663835130709 7.811531694978799e-08 7.107263800763454 0.2930615888766981 ILAT(ph)PPQEDAPSVDIANIR ddPTM_KYSE-520_SHP099_60min_R1 5 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 1 ILAT(0.999)PPQEDAPS(0.001)VDIANIR;ILAT(0.998)PPQEDAPS(0.002)VDIANIR;ILAT(0.995)PPQEDAPS(0.005)VDIANIR;ILAT(0.963)PPQEDAPS(0.037)VDIANIR;ILAT(0.828)PPQEDAPS(0.172)VDIANIR 214.26 2.234e-13 894174000.0 399613.0 467458.0 352238.0 280202.0 286187.0 405113.0 270847.8 398955.0 419507.0 430130.0 True False 377445.67028123396 445000.616011237 374943.82508072717 306832.3138341966 308708.28871871304 402584.5394979626 298227.73884379567 397571.1182217965 343335.10371088085 426319.38283607614 0.8853589244999573 1.0438198072320442 0.8794904481856426 0.7197240524064479 0.7241244502303437 0.9443261453884216 0.6995406515646676 0.9325663674425669 0.8053471588058112 1.0 18.7015751241224 -4.992542997734395 22.517577933804294 0.8221791749398301 0.9638560404305154 0.20089556636977768 0.10330380779498201 71.59257753553305 216168.03102832648 0.025671081510766636 0.05318385954629803 1.0173186406038902e-05 4.992542997734395 0.14167686549068537 ILATDVSSKNT(ph)PDSKK ddPTM_KYSE-520_SHP099_60min_R1 1 ILATDVSSKNTPDSKK 16 2 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 ILATDVS(0.016)S(0.013)KNT(0.971)PDSKK 156.92 3.7161000000000003e-06 591840000.0 491290.0 428740.0 430050.0 270310.0 251990.0 346830.0 282550.0 304350.0 457490.0 354420.0 True False 464037.1643376654 408142.68684814003 457771.71110432904 296000.18112833495 271820.1793730276 344665.3053199437 311112.9114222619 303294.2808858242 374421.34838439134 351280.1145345876 1.3209889917978137 1.1618724486835523 1.3031529317019057 0.842632898592927 0.7737989374467246 0.9811694173938429 0.885654776771115 0.8633972386614026 1.0658768683233426 1.0 18.422262384403492 -5.260223553561831 24.99998749135506 0.9059004444115528 1.251991571846063 0.7594280435123877 0.08904055756785953 50.353300919740676 1035358.7909622644 0.02431551682788507 0.039297722490181305 5.492580698819574e-06 5.260223553561831 0.3460911274345102 ILATPPQEDAPS(ph)VDIANIR ddPTM_KYSE-520_SHP099_60min_R1 3 ILATPPQEDAPSVDIANIR 19 0 P29401;P29401-2;A0A0B4J1R6;E9PFF2 P29401 TKT Transketolase 1 ILAT(0.463)PPQEDAPS(0.537)VDIANIR;ILAT(0.003)PPQEDAPS(0.997)VDIANIR;ILAT(0.025)PPQEDAPS(0.975)VDIANIR 271.66 2.1299e-35 451300000.0 486808.0 529492.0 408633.0 348999.0 360053.0 499242.0 334974.0 484105.0 554580.0 544947.0 True False 459803.78981231054 504054.40953630453 434974.1370159167 382167.7600296241 388387.1226786645 496126.04549358296 368836.44095119694 482425.7527459567 453882.25182411773 540119.1935423507 0.8513005931092826 0.9332281014316179 0.8053299016521812 0.7075618948536003 0.7190766914455358 0.9185491858561063 0.6828797149980869 0.8931838722152905 0.840337201956014 1.0 19.042918290892537 -8.28571629596239 1.2348934498248325 0.9989924830342426 0.8073376832856948 0.31394822819629964 0.08333737773785142 1.264877085977841 3.4038714812041935 0.0819439116839823 0.02499299572577785 5.179450704703582e-09 8.28571629596239 -0.19165479974854782 ILDDWGETCK ddPTM_KYSE-520_SHP099_60min_R1 2 ILDDWGETCK 10 0 P55145 P55145 MANF Mesencephalic astrocyte-derived neurotrophic factor 0 ; 178.22 0.00079302 108430000.0 529830.0 592540.0 481780.0 364130.0 625150.0 666650.0 494310.0 579610.0 623300.0 571600.0 False True 500439.2737100798 564073.4889793278 512836.30967525515 398736.8057203237 674345.7483830631 662489.1900687389 544279.6788007015 577599.4681919912 510124.43211434287 566536.068698071 0.8833317088885708 0.9956532693065735 0.9052138742971465 0.7038153927898031 1.1902962329172517 1.1693680714648462 0.9607149639236284 1.0195281467592072 0.9004271048207665 1.0 19.111808283042805 -5.76860985927257 24.99996572929073 1.043530707698888 0.8832078449616677 0.37398784400167084 0.10606286822495811 201.9549724898965 704116.8092557463 0.034830544836078156 0.04030861578232479 1.7036882992592862e-06 5.76860985927257 -0.1603228627372203 ILDEIEEHNIK ddPTM_KYSE-520_SHP099_60min_R1 4 ILDEIEEHNIK 11 0 B5MCX3;Q15019;Q15019-3;Q15019-2;H7C2Y0;C9J2Q4 B5MCX3 SEPT2 Septin-2 0 ;;; 194.17 1.0731e-06 1280140000.0 1827640.0 1636340.0 1088790.0 1042450.0 1803570.0 1679590.0 1232120.0 1410390.0 1436510.0 1396100.0 False True 1726257.165889986 1557727.770203584 1158975.145525596 1141524.134575979 1945500.6980904443 1669107.0557977243 1356674.7139323915 1405497.6862774997 1175675.9954701988 1383731.6401493635 1.2475375396515826 1.1257441291401264 0.8375721938399077 0.8249606364806112 1.4059812189308918 1.2062360990875056 0.9804464063464998 1.015729962007508 0.849641622231962 1.0 20.400132744259682 -6.924058015311998 9.662278605286922 0.9591722818540893 1.0971766688806501 0.15065438013516042 0.17001218236069474 0.8102385050623797 96.03482953674536 0.07824951806524584 0.05272285032944582 1.1910828863627173e-07 6.924058015311998 0.13800438702656082 ILDILGET(ph)CKSEPVKEESSELEQPFAQDTSSVGPDR ddPTM_KYSE-520_SHP099_60min_R1 4 ILDILGETCKSEPVKEESSELEQPFAQDTSSVGPDR 36 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 ILDILGET(0.499)CKS(0.499)EPVKEES(0.001)S(0.001)ELEQPFAQDTSSVGPDR;ILDILGET(0.576)CKS(0.424)EPVKEESSELEQPFAQDTSSVGPDR;ILDILGET(0.638)CKS(0.362)EPVKEESSELEQPFAQDTSSVGPDR;ILDILGET(0.535)CKS(0.465)EPVKEESSELEQPFAQDTSSVGPDR 317.76 1.5609e-67 879634000.0 326278.0 304357.0 270044.0 240749.0 240520.0 269164.0 235618.0 291864.0 384077.0 275288.0 True False 308178.708920932 289735.23287082935 287451.46832567704 263629.7125761737 259447.5556284001 267484.0476346838 259436.56685008158 290851.59190556954 314338.298593263 272849.1624908231 1.1294838001611869 1.0618879318736199 1.0535178693661744 0.9662104518464137 0.9508827267781197 0.9803367002956451 0.9508424525906595 1.0659794197292138 1.152058872835409 1.0 18.057744089808754 -4.546356849246435 1.67712809835106 1.0074600906843958 1.1354931760203735 0.27555720067099865 0.05872775916032421 0.807171122932831 3.351077572948601 0.018237230759170144 0.14057598252923575 2.842124842676571e-05 4.546356849246435 0.12803308533597768 ILDILGETCKS(ph)EPVKEESSELEQPFAQDTSSVGPDR ddPTM_KYSE-520_SHP099_60min_R1 1 ILDILGETCKSEPVKEESSELEQPFAQDTSSVGPDR 36 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 ILDILGET(0.054)CKS(0.942)EPVKEES(0.003)S(0.001)ELEQPFAQDTSSVGPDR 118.86 7.3683e-05 480190000.0 40350.0 42755.0 41567.0 37569.0 32396.0 52914.0 48185.0 36892.0 57836.0 42090.0 True False 38111.705064269176 40700.98562343664 44246.47532955151 41139.54646446826 34945.38089197428 52583.74409854832 53056.01004028209 36764.03026265754 47334.44032691345 41717.115345524515 0.9135747941487969 0.9756423781061628 1.0606312292467353 0.9861551098087078 0.8376749111854227 1.2604837046622304 1.2718043805484271 0.8812697128782097 1.1346527662534454 1.0 15.348351781400682 -6.25619923909526 24.997135500894867 1.1123566104080018 0.9635257833613665 0.29506595260903357 0.11929352105839933 641.4919300481183 3060120.9783763653 0.04160011535077917 0.04042071680059944 5.543713284647725e-07 6.25619923909526 -0.1488308270466353 ILDPNTGEPAPVLSS(ph)PPPADVSTFLAFPSPEK ddPTM_KYSE-520_SHP099_60min_R1 1 ILDPNTGEPAPVLSSPPPADVSTFLAFPSPEK 32 0 P46060 P46060 RANGAP1 Ran GTPase-activating protein 1 1 ILDPNTGEPAPVLS(0.075)S(0.308)PPPADVS(0.308)T(0.308)FLAFPS(0.002)PEK 71.068 0.013661000000000001 46725000.0 58103.0 76170.0 54375.0 52068.0 58568.0 79815.0 57186.0 77518.0 83729.0 69563.0 True False 54879.91076454105 72510.67886649905 57880.09950307608 57016.52706518497 63176.96839366426 79316.84497912905 62966.91896157663 77249.10815083726 68525.9242363257 68946.72593919504 0.7959755886441993 1.051691402002861 0.8394901819431028 0.8269649688002378 0.91631571380751 1.1504077082511437 0.913269166937788 1.12041735265231 0.9938967123219101 1.0 16.073194423914718 -6.029238526919363 20.315798082416205 1.0352438017626384 0.8860518031815595 0.41655099199962264 0.08919429248783978 69.42040464632142 48235.00299582739 0.02804344015143629 0.028145223842357486 9.348920637229664e-07 6.029238526919363 -0.1491919985810789 ILDPNTGEPAPVLSSPPPADVS(ph)TFLAFPSPEK ddPTM_KYSE-520_SHP099_60min_R1 5 ILDPNTGEPAPVLSSPPPADVSTFLAFPSPEK 32 0 P46060 P46060 RANGAP1 Ran GTPase-activating protein 1 1 ILDPNTGEPAPVLS(0.004)S(0.04)PPPADVS(0.478)T(0.478)FLAFPSPEK;ILDPNTGEPAPVLSS(0.002)PPPADVS(0.498)T(0.498)FLAFPSPEK;ILDPNTGEPAPVLS(0.001)S(0.021)PPPADVS(0.489)T(0.489)FLAFPSPEK;ILDPNTGEPAPVLSSPPPADVS(0.5)T(0.5)FLAFPSPEK;ILDPNTGEPAPVLS(0.009)S(0.249)PPPADVS(0.371)T(0.371)FLAFPS(0.001)PEK 199.36 7.847299999999999e-16 1034864000.0 1037551.0 1553225.0 1071456.0 925469.0 1018981.0 1589923.0 994726.0 1446623.0 1610230.0 1432447.0 True False 979995.9777233602 1478605.7395617452 1140523.7681502143 1013425.2955075991 1099169.007491198 1579999.7008050103 1095282.6116702207 1441605.002457346 1317852.8225950238 1419756.634006902 0.6902563117156006 1.0414501359917978 0.8033234294045001 0.7138021201897566 0.7741953664192945 1.112866573721063 0.771457998811433 1.0153888123690484 0.9282244513101652 1.0 20.43721222229244 -6.218184248631142 24.967040359245928 0.954416472620368 0.8126476302389949 0.3075642524830364 0.11988659538283067 665.4631842118115 384108.0942105189 0.03900699941930029 0.03900677815434592 6.050841144756761e-07 6.218184248631142 -0.1417688423813731 ILDPNTGEPAPVLSSPPPADVSTFLAFPS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 1 ILDPNTGEPAPVLSSPPPADVSTFLAFPSPEK 32 0 P46060 P46060 RANGAP1 Ran GTPase-activating protein 1 1 ILDPNTGEPAPVLSSPPPADVS(0.012)T(0.012)FLAFPS(0.975)PEK 150.04 6.1484e-07 438570000.0 107860.0 156700.0 90576.0 82565.0 88308.0 169180.0 83394.0 120570.0 151740.0 145410.0 True False 101876.79078642065 149171.8967885048 96414.67388672396 90411.95277592762 95257.3371962114 168124.08486586547 91824.27936700816 120151.7708112495 124187.84105411587 144121.7805272682 0.7068799067962203 1.035040618029841 0.6689805908169589 0.6273302511609026 0.660950321649603 1.166541824912134 0.6371297872609532 0.8336822537972773 0.861686835950651 1.0 17.136928854947183 ILDSVGIEADDDR ddPTM_KYSE-520_SHP099_60min_R1 1 ILDSVGIEADDDR 13 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 0 117.98 0.00086579 227000000.0 106690.0 127500.0 333370.0 63799.0 141660.0 128630.0 105410.0 104810.0 183840.0 166850.0 False True 100771.69301875788 121374.7086185982 354859.5636108593 69862.43777813128 152807.83606485592 127827.17245712424 116065.87150246199 104446.43857283787 150459.29022926508 165371.83880733573 0.6093642892618532 0.7339502873884362 2.145828250868539 0.42245667873067305 0.9240257420302538 0.772968199295695 0.7018478620031733 0.6315853976475512 0.9098241351996799 1.0 17.335354053129308 ILDSVGIEADDDRLNK ddPTM_KYSE-520_SHP099_60min_R1 8 ILDSVGIEADDDRLNK 16 1 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 0 ;;;;;;; 249.41 2.1335999999999997e-23 17570420000.0 8833480.0 8661130.0 6483708.0 5173752.0 8062720.0 8592570.0 6097229.0 7345140.0 7695000.0 7392400.0 False True 8343469.255294198 8245036.314178819 6901658.191979599 5665463.834534737 8697210.193398535 8538940.583377995 6713596.4105406 7319661.423708572 6297781.975164242 7326909.087200181 1.1387433849656887 1.125308942154417 0.9419603969205135 0.7732406349127598 1.1870230802497899 1.165421937375364 0.916293123149158 0.9990108156924903 0.8595414383080332 1.0 22.804773284051727 -4.74810718634441 22.677014856204206 0.9845880103429934 1.1320266091644744 0.20644233599165518 0.11874440104939517 130.81834567283406 222497.98897247357 0.03210678250348644 0.08356479289617061 1.7860467139791725e-05 4.74810718634441 0.14743859882148103 ILDWHVANTDK ddPTM_KYSE-520_SHP099_60min_R1 1 ILDWHVANTDK 11 0 P37837;F2Z393 P37837 TALDO1 Transaldolase 0 88.98700000000001 0.005318600000000001 535740000.0 527180.0 505990.0 382380.0 381010.0 573350.0 529520.0 452180.0 525710.0 543010.0 450280.0 False True 497936.27449272416 481681.48089352576 407028.8266296319 417221.07584516617 618469.3830847469 526215.0692645288 497890.7672515254 523886.4347116363 444413.07216815214 446290.8695125388 1.115721401687189 1.0792994295842135 0.9120258881258521 0.934863570704182 1.3857988709477076 1.1790854467609593 1.1156194340147416 1.1738676959352794 0.9957924361158506 1.0 18.76762476580425 -4.21621535170503 17.90495081742476 1.0946975166956712 1.115723793375303 0.0007960449575802331 0.13284190493967593 8645.279061131905 3419773.010911849 0.03522279327676291 5.822671431770923 6.078335227883546e-05 4.21621535170503 0.02102627667963186 ILDWHVANTDKK ddPTM_KYSE-520_SHP099_60min_R1 2 ILDWHVANTDKK 12 1 P37837;F2Z393 P37837 TALDO1 Transaldolase 0 ; 146.5 5.0246000000000006e-05 9241600000.0 22968000.0 19527500.0 13163100.0 12462400.0 21231000.0 18901800.0 14315800.0 16763900.0 16088800.0 14706600.0 False True 21693919.25442715 18589369.588624917 14011614.487704657 13646822.749042816 22901758.912134405 18783826.854933284 15762980.772744015 16705749.943623682 13167479.48564295 14576310.965561677 1.4882997011851418 1.2753137355908901 0.9612593008483982 0.93623295916814 1.5711628934263697 1.288654372105012 1.081410845994298 1.146089019580679 0.9033478715398385 1.0 23.797122306708392 -7.373203331445262 1.6526048632260228 0.9645593594576797 1.2341921803466398 0.24362625193034448 0.19326597151985345 0.6658626224677073 3.240290069770849 0.17276513554049688 0.06185832232753522 4.23444667939718e-08 7.373203331445262 0.2696328208889601 ILEDHGS(ph)PAGEIDDEDKDKDETETVK ddPTM_KYSE-520_SHP099_60min_R1 6 ILEDHGSPAGEIDDEDKDKDETETVK 26 2 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154;H0YBA1 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 1 ILEDHGS(1)PAGEIDDEDKDKDETETVK;ILEDHGS(1)PAGEIDDEDKDKDETETVK;ILEDHGS(1)PAGEIDDEDKDKDETETVK;ILEDHGS(1)PAGEIDDEDKDKDETETVK;ILEDHGS(1)PAGEIDDEDKDKDETETVK;ILEDHGS(1)PAGEIDDEDKDKDETETVK 321.3 7.966499999999998e-62 13924920000.0 9223860.0 8471600.0 7719620.0 7747480.0 7999540.0 8016810.0 7628660.0 8038240.0 9401040.0 7498780.0 True False 8712194.098490965 8064611.619869164 8217239.057028704 8483798.169835204 8629058.286843562 7966774.1151053235 8399839.401346846 8010357.221579319 7694048.116932823 7432346.643162561 1.1721996452501053 1.0850693606020463 1.105604925543699 1.1414696565101594 1.1610139705717204 1.0719056171087518 1.1301732554514712 1.077769593665078 1.035211150170319 1.0 22.825386359622392 -7.718407494959389 1.2348866643036434 0.9987917175143549 1.1243754389545262 0.6825322427617024 0.02941944108711454 0.2517212888106044 0.7649417564558209 0.02727984119104156 0.008859899978497553 1.9124606367311143e-08 7.718407494959389 0.12558372144017127 ILEGPQQS(ph)LSGSPLQPIPAS(ph)PPPQIPPGLRPR ddPTM_KYSE-520_SHP099_60min_R1 2 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 2 ILEGPQQS(0.461)LS(0.344)GS(0.195)PLQPIPAS(1)PPPQIPPGLRPR;ILEGPQQS(0.333)LS(0.333)GS(0.333)PLQPIPAS(1)PPPQIPPGLRPR 70.112 0.0052345 411930000.0 256372.0 247524.0 278223.0 242911.0 270478.0 265572.0 261698.0 294743.0 358486.0 289423.0 True False 242150.5340950884 235632.57549890142 296157.69975253986 265997.1884061445 291763.0797906971 263914.4666390683 288152.98776635324 293720.60532653367 293393.979096651 286858.9373876871 0.8441449874292195 0.8214231623553924 1.032415801472086 0.9272752344008437 1.0170960070049415 0.9200147955731651 1.0045111035774257 1.0239200075177477 1.0227813773852612 1.0 18.129981941787094 -4.754649679494238 24.998581337796363 0.9906021500252268 0.8327839997241181 0.7449220188682324 0.0375881574011831 74.22305971430507 273270.38782149996 0.009532218123502825 0.024035071741189646 1.7593422024098708e-05 4.754649679494238 -0.15781815030110868 ILEGPQQSLS(ph)GSPLQPIPAS(ph)PPPQIPPGLRPR ddPTM_KYSE-520_SHP099_60min_R1 4 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 2 ILEGPQQS(0.269)LS(0.402)GS(0.329)PLQPIPAS(1)PPPQIPPGLRPR;ILEGPQQS(0.283)LS(0.387)GS(0.33)PLQPIPAS(1)PPPQIPPGLRPR;ILEGPQQS(0.295)LS(0.353)GS(0.353)PLQPIPAS(1)PPPQIPPGLRPR;ILEGPQQS(0.153)LS(0.467)GS(0.38)PLQPIPAS(1)PPPQIPPGLRPR 89.51 0.0016600000000000002 3510800000.0 964491.0 1059117.0 1051374.0 974856.0 1045451.0 1007515.0 980062.0 1074016.0 1492751.0 1182774.0 True False 910988.7615648587 1008235.4295529712 1119147.2502978784 1067506.0211388553 1127722.0458974987 1001226.725166286 1079136.2314433719 1070290.4891732188 1221705.0475904343 1172295.5425442464 0.7770982047647553 0.8600522589762529 0.95466306036529 0.910611686556476 0.961977594361564 0.8540736434033624 0.9205325724444112 0.9129869135647783 1.0421476524076463 1.0 20.160904896773992 -4.469872957592156 2.542076844758008 0.9369897755082865 0.7718261874278532 0.5312769794148697 0.049737957508488695 0.27769933844055583 3.0019400530216402 0.012948045271450204 0.08012826705054904 3.389432913485007e-05 4.469872957592156 -0.1651635880804333 ILEGPQQSLSGS(ph)PLQPIPAS(ph)PPPQIPPGLRPR ddPTM_KYSE-520_SHP099_60min_R1 1 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 2 ILEGPQQS(0.034)LS(0.057)GS(0.909)PLQPIPAS(1)PPPQIPPGLRPR 109.13 0.00024067 294230000.0 79344.0 75542.0 84033.0 67011.0 83564.0 82337.0 102860.0 100710.0 110610.0 117420.0 True False 74942.63015165736 71912.84892914629 89449.90163755383 73379.70529240825 90140.01138587897 81823.10424164069 113258.09261686029 100360.66051589072 90526.0122511912 116379.7501513776 0.6439490551765054 0.617915477869713 0.7686036576054207 0.630519529359375 0.7745334671077396 0.7030699424531471 0.973176969958632 0.8623550092292644 0.7778502027495515 1.0 16.828480528407585 -6.719413747242701 10.643598111058145 0.8918028506530967 0.6910754397711777 0.6583312380776278 0.07519203940672403 0.33377741815425516 82.87426186406022 0.02862772485130918 0.02210589849184803 1.9080346302698928e-07 6.719413747242701 -0.20072741088191903 ILEGPQQSLSGS(ph)PLQPIPASPPPQIPPGLRPR ddPTM_KYSE-520_SHP099_60min_R1 2 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 ILEGPQQSLS(0.011)GS(0.988)PLQPIPASPPPQIPPGLRPR;ILEGPQQSLS(0.01)GS(0.99)PLQPIPASPPPQIPPGLRPR 207.62 9.5058e-18 3229600000.0 276924.0 318753.0 308484.0 259338.0 242989.0 261583.0 181164.0 228082.0 304465.0 240293.0 True False 261562.4736856924 303439.6274219925 328369.37223185156 283985.4055471869 262110.8518817119 259950.3634677127 199477.82511025533 227290.8367767391 249181.83093806115 238164.19096512508 1.098244335665027 1.2740774597236821 1.3787520739418606 1.192393383725648 1.1005468572733228 1.0914754330376133 0.8375643051203501 0.954345134151682 1.0462606906953087 1.0 17.86159698839196 -6.08918384766254 1.597857722107144 0.962317875627052 1.252050426757506 0.6525444932236699 0.08733558426272564 0.23181305755723952 1.190765044609226 0.03699170123896974 0.03832256319232043 8.143594724105653e-07 6.08918384766254 0.28973255113045415 ILEGPQQSLSGSPLQPIPAS(ph)PPPQIPPGLRPR ddPTM_KYSE-520_SHP099_60min_R1 3 ILEGPQQSLSGSPLQPIPASPPPQIPPGLRPR 32 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 ILEGPQQS(0.001)LSGSPLQPIPAS(0.999)PPPQIPPGLRPR;ILEGPQQS(0.002)LS(0.001)GS(0.001)PLQPIPAS(0.997)PPPQIPPGLRPR;ILEGPQQSLSGSPLQPIPAS(1)PPPQIPPGLRPR 129.61 4.0039e-05 1148880000.0 111706.0 144090.0 120576.0 106777.0 102474.0 139058.0 128025.0 181431.0 176437.0 174539.0 True False 105509.44549960973 137167.70011650052 128348.5218884211 116925.05397632446 110538.12080269682 138190.08744105411 140967.01640359248 180801.65820731377 144400.48841482165 172992.72024928703 0.6099068524245869 0.7929102445399915 0.7419301904927995 0.6758958053716504 0.6389755629220033 0.798820246550945 0.8148725345231599 1.0451402691788063 0.8347200287199182 1.0 17.400351803158767 -6.854736888009362 1.946206776791603 0.9542964896005197 0.7021911038374828 0.6943330943212572 0.07462557555676959 0.1890081353514186 1.4534395129461672 0.038979057220200265 0.02288096686101241 1.3972145900312286e-07 6.854736888009362 -0.25210538576303687 ILELT(ph)PEPDRPR ddPTM_KYSE-520_SHP099_60min_R1 11 ILELTPEPDRPR 12 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR;ILELT(1)PEPDRPR 207.52 3.0122e-09 23564420000.0 5564380.0 5161290.0 4686230.0 3853460.0 4137720.0 4895310.0 4001930.0 4621170.0 5701730.0 4899590.0 True False 5255712.749083478 4913333.881145763 4988311.8840331035 4219691.679815006 4463335.023593647 4864756.5544669535 4406484.139472994 4605140.239859189 4666439.560916597 4856183.44442334 1.0822722842397856 1.0117685909884753 1.0272082883857063 0.8689316884560329 0.9191034635891225 1.001765400780619 0.9073965573794861 0.948304423126264 0.9609273649403344 1.0 22.21139149037433 -5.104006649260637 7.692472859653117 0.9415556151555836 1.0402979670491879 0.537429720331905 0.041220505104323193 0.2077256069541833 13.575885968466322 0.011093828767437757 0.019346830190101853 7.870337397318928e-06 5.104006649260637 0.09874235189360425 ILENEKDLEEAEEYK ddPTM_KYSE-520_SHP099_60min_R1 5 ILENEKDLEEAEEYK 15 1 E5RIW3;E5RJD8;E5RHG6;O75347 E5RIW3 TBCA Tubulin-specific chaperone A 0 ;;;; 254.23 1.6365e-19 6037700000.0 5026030.0 4588050.0 2940440.0 2830240.0 4744460.0 4810330.0 3550270.0 3899370.0 3436820.0 4181350.0 False True 4747226.096757596 4367633.191196552 3129985.4672703436 3099225.1586573194 5117822.009715281 4780306.946168685 3909165.9388961773 3885843.995589798 2812780.1231818013 4144306.492041079 1.1454814227360821 1.0538875924317759 0.755249514793685 0.7478272093555863 1.234904324654508 1.15346366282248 0.9432617849098573 0.9376343190476755 0.6787094845865277 1.0 21.982699270755212 -7.437096480628038 3.3102193839978313 0.8334829686052346 1.0016992601784094 0.1264579247449602 0.1683405072706285 0.5478470199624328 11.278543429079939 0.12186531412666828 0.04872574619129404 3.65513581975774e-08 7.437096480628038 0.16821629157317475 ILENEKDLEEAEEYKEAR ddPTM_KYSE-520_SHP099_60min_R1 6 ILENEKDLEEAEEYKEAR 18 2 E5RIW3;E5RJD8;E5RHG6;O75347 E5RIW3 TBCA Tubulin-specific chaperone A 0 ;;;;; 207.82 2.9949e-18 8102670000.0 4651290.0 4000260.0 2761720.0 2189060.0 3890140.0 3480010.0 2619850.0 2829080.0 3392830.0 2596590.0 False True 4393273.671583265 3808081.5050873253 2939744.8901082356 2397107.6042351136 4196271.8861311525 3458289.96674583 2884690.0052720373 2819266.5817922354 2776777.5982841463 2573586.232716451 1.7070629364325254 1.47967900071794 1.1422756512826462 0.9314269612426929 1.6305153613220635 1.3437630038514636 1.1208833683521895 1.095462256501297 1.078952615997337 1.0 21.295348692816013 -4.5673503737322 3.240069133369772 1.184423649116725 1.6815683151956307 0.4693797192931677 0.1872176056945344 0.23014119506268654 4.719564651643433 0.05184469793378696 0.1984217006939832 2.7080060249916338e-05 4.5673503737322 0.4971446660789056 ILEPDDFLDDLDDEDYEEDT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 ILEPDDFLDDLDDEDYEEDTPK 22 0 J3KMZ8;Q92785 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 ILEPDDFLDDLDDEDYEEDT(1)PK;ILEPDDFLDDLDDEDYEEDT(1)PK;ILEPDDFLDDLDDEDYEEDT(1)PK;ILEPDDFLDDLDDEDYEEDT(1)PK;ILEPDDFLDDLDDEDYEEDT(1)PK;ILEPDDFLDDLDDEDYEEDT(1)PK 206.47 1.1847e-14 1001036000.0 754031.0 828578.0 586500.0 501905.0 608465.0 781590.0 593521.0 692341.0 810564.0 863245.0 True False 712203.3973064679 788771.8691590672 624306.7284331789 549605.9002967596 656347.7338077265 776711.8068939104 653519.8948867536 689939.4306646045 663386.0102556237 855597.3208944479 0.8324048941176266 0.9218961419075964 0.7296735429004428 0.6423651487386584 0.767122240543689 0.9078006533282854 0.763817135616506 0.8063833462490704 0.7753483958576624 1.0 19.706572439480272 ILEPDDFLDDLDDEDYEEDT(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 10 ILEPDDFLDDLDDEDYEEDTPKR 23 1 J3KMZ8;Q92785 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 ILEPDDFLDDLDDEDY(0.173)EEDT(0.827)PKR;ILEPDDFLDDLDDEDY(0.412)EEDT(0.588)PKR;ILEPDDFLDDLDDEDYEEDT(1)PKR;ILEPDDFLDDLDDEDYEEDT(1)PKR;ILEPDDFLDDLDDEDYEEDT(1)PKR;ILEPDDFLDDLDDEDYEEDT(1)PKR;ILEPDDFLDDLDDEDY(0.019)EEDT(0.981)PKR;ILEPDDFLDDLDDEDYEEDT(1)PKR;ILEPDDFLDDLDDEDY(0.014)EEDT(0.986)PKR;ILEPDDFLDDLDDEDYEEDT(1)PKR 237.28 5.6695e-28 1285946000.0 761436.0 775636.0 641308.0 516131.0 635686.0 694172.0 522848.0 670657.0 810685.0 747400.0 True False 719197.6271949649 738373.282306628 682647.7398090796 565183.9350595569 685710.8716414229 689839.4150579707 575702.5783447425 668330.64739952 663485.0397057856 740778.6174684006 0.970867152797703 0.9967529635642118 0.9215273277487647 0.7629592994882387 0.9256623442842196 0.9312355929163914 0.7771587418548839 0.9022002412590276 0.8956590053493112 1.0 19.498682930327732 -4.963469105943996 6.054221880249033 0.8772685891795964 0.9797352511645292 0.24944387458366157 0.06692141496574458 0.22383863211691638 22.408666502097326 0.01717011500884035 0.03587701755893495 1.0877545135936686e-05 4.963469105943996 0.10246666198493282 ILEPDDFLDDLDDEDYEEDT(ph)PKRR ddPTM_KYSE-520_SHP099_60min_R1 9 ILEPDDFLDDLDDEDYEEDTPKRR 24 2 J3KMZ8;Q92785 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 ILEPDDFLDDLDDEDYEEDT(1)PKRR;ILEPDDFLDDLDDEDYEEDT(1)PKRR;ILEPDDFLDDLDDEDYEEDT(1)PKRR;ILEPDDFLDDLDDEDYEEDT(1)PKRR;ILEPDDFLDDLDDEDYEEDT(1)PKRR;ILEPDDFLDDLDDEDYEEDT(1)PKRR;ILEPDDFLDDLDDEDYEEDT(1)PKRR;ILEPDDFLDDLDDEDYEEDT(1)PKRR;ILEPDDFLDDLDDEDYEEDT(1)PKRR 328.52 7.904599999999998e-62 2200206000.0 1452657.0 1590032.0 1633460.0 1003281.0 1194458.0 1112466.0 876389.0 900103.0 1912600.0 1137395.0 True False 1372075.220410064 1513644.4760333116 1738755.4452284095 1098632.524592567 1288455.0490636444 1105522.6870456894 964982.9528523965 896980.7527786194 1565320.0527224345 1127318.5651799187 1.2171140108839444 1.342694534434227 1.5423816292344181 0.9745537406431576 1.1429378428252963 0.9806657329991273 0.8559984574532279 0.7956763779859 1.3885339078689007 1.0 20.10446382881107 -5.276601288785917 24.514446709058827 1.0079323360548 1.3649265062749119 0.46832369256630935 0.16940313357416237 514.5631487233617 831967.4117356973 0.04788803313820728 0.07135840495107353 5.2893062242401415e-06 5.276601288785917 0.3569941702201118 ILEQQNSS(ph)RTLEK ddPTM_KYSE-520_SHP099_60min_R1 2 ILEQQNSSRTLEK 13 1 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181;Q5JXL7 G3V1Q4 SEPT7;DKFZp586I031 Septin-7 1 ILEQQNS(0.017)S(0.789)RT(0.194)LEK;ILEQQNS(0.056)S(0.874)RT(0.069)LEK 71.545 0.012691 1387310000.0 3364000.0 3906900.0 3812000.0 2409600.0 2752100.0 2566700.0 2023740.0 2351400.0 3900300.0 2753000.0 True False 3177392.214032255 3719206.6596235395 4057727.6194156543 2638607.659527341 2968674.6126929983 2550680.273230977 2228319.3889990724 2343243.5422208854 3192103.8385618054 2728610.561801592 1.1644725922098427 1.3630404835668073 1.4871039774677481 0.9670151162154758 1.087980327516178 0.9347908818277333 0.8166498437680321 0.8587680393180535 1.16986420973691 1.0 21.379735071429913 -5.276240833662474 24.315269116185448 0.9668080653183684 1.3406891537010404 0.6536882372244968 0.12051999047137676 323.1454357210002 530850.5321027477 0.03518934028310926 0.05245860467066729 5.293698057494705e-06 5.276240833662474 0.373881088382672 ILEQQNSSRT(ph)LEK ddPTM_KYSE-520_SHP099_60min_R1 5 ILEQQNSSRTLEK 13 1 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181;Q5JXL7 G3V1Q4 SEPT7;DKFZp586I031 Septin-7 1 ILEQQNSS(0.068)RT(0.932)LEK;ILEQQNSS(0.001)RT(0.999)LEK;ILEQQNSS(0.001)RT(0.999)LEK;ILEQQNSS(0.007)RT(0.993)LEK;ILEQQNSS(0.001)RT(0.999)LEK 239.75 2.0811e-15 12705470000.0 4125130.0 4717310.0 4382740.0 2993060.0 3171010.0 2635100.0 2075810.0 2638530.0 4652070.0 2936090.0 True False 3896300.815657218 4490683.346773328 4665258.43303194 3277519.5225036996 3420550.4464211375 2618653.363459286 2285653.1327533033 2629377.5552675347 3807371.3571412982 2910078.5268434514 1.338898857785641 1.5431485114060999 1.603138331147484 1.1262649761066104 1.1754151700268352 0.8998565981309539 0.7854266170722687 0.9035417879666664 1.3083397310488167 1.0 21.472626653302775 -5.540334790328004 1.936740445821451 0.9773568776825722 1.4994922337158463 0.6508951759235091 0.15601195131473908 0.20375943560792106 1.5395492042679535 0.05263227100883075 0.08189996862508056 2.881809108352581e-06 5.540334790328004 0.5221353560332741 ILESITVSSLMAT(ph)PQDPK ddPTM_KYSE-520_SHP099_60min_R1 2 ILESITVSSLMATPQDPK 18 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 ILESITVSSLMAT(1)PQDPK;ILESITVSSLMAT(1)PQDPK 217.88 1.2569e-17 355720000.0 198734.0 298380.0 211606.0 178023.0 182950.0 241449.0 172530.0 250670.0 273365.0 259342.0 True False 187709.828853593 284045.3769224891 225246.461341571 194942.2523954334 197347.12415689242 239942.027230041 189971.01613053572 249800.4842768177 223728.80697086075 257044.4316450228 0.7302621871724474 1.1050438832876741 0.8762938761211344 0.7583990485530058 0.7677549087288843 0.933465182242889 0.7390590603918814 0.9718183065789616 0.8703896269569038 1.0 17.97165823375273 -8.130613133958931 1.1281858202265664 0.9966206890369742 0.8563717360305908 0.12845941668484218 0.11275873867372513 1.4703851333701776 3.9758338581893757 0.10745684870962977 0.034042597838438646 7.4026440303436865e-09 8.130613133958931 -0.1402489530063834 ILEVHVDK ddPTM_KYSE-520_SHP099_60min_R1 5 ILEVHVDK 8 0 O60884 O60884 DNAJA2 DnaJ homolog subfamily A member 2 0 ;;;; 104.17 0.003406 407580000.0 2105327.0 2033098.0 1417214.0 1248782.0 2031519.0 2031823.0 1393165.0 1844790.0 1793403.0 1715928.0 False True 1988540.3144446765 1935424.9203376884 1508569.8820625744 1367465.8658200004 2191387.9875380485 2019141.6389905273 1533999.714180129 1838390.8540672248 1467766.223210589 1700726.2128917812 1.16923012026934 1.1379991121832855 0.8870151295531106 0.804048209202861 1.2885013301535375 1.1872232130516396 0.9019674669280463 1.080944622439475 0.8630232262457546 1.0 20.697719480404885 -4.586678726719845 11.512664397191985 1.0107652614070706 1.161439473631987 0.15189505891185062 0.14320887368466906 1.0687197152557493 188.53457688910663 0.03836260938146009 0.10160657665792991 2.5901282774869165e-05 4.586678726719845 0.1506742122249165 ILFFNT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 ILFFNTPK 8 0 K7EJC1;K7EJR3;R4GMR5;P48556 K7EJC1 PSMD8 26S proteasome non-ATPase regulatory subunit 8 1 ILFFNT(1)PK;ILFFNT(1)PK;ILFFNT(1)PK 123.79 0.0042405 1237749000.0 2747270.0 2683510.0 2128240.0 1890414.0 2054190.0 2593920.0 1940315.0 2239210.0 2585770.0 2224140.0 True False 2594873.4565530308 2554590.1515693692 2265429.7557043983 2070078.378186304 2215843.0662577073 2577730.383114234 2136460.9758495353 2231442.703145543 2116259.3499571714 2204435.849954738 1.1771145241565135 1.1588407762565742 1.0276687143111525 0.9390513124837846 1.0051746646667916 1.1693378980237328 0.9691645034231329 1.012251140440925 0.9600004236914507 1.0 21.071978063833395 -4.764524756220335 4.546673764729196 1.011266234613975 1.1723413472544364 0.5355419260449887 0.059005015771262194 0.14594774213744469 7.436984773878519 0.01616563436315557 0.040668888701085835 1.7197893047716786e-05 4.764524756220335 0.16107511264046148 ILGETS(ph)LMR ddPTM_KYSE-520_SHP099_60min_R1 1 ILGETSLMR 9 0 O96017-13;O96017-4;O96017;O96017-9;H0Y820;O96017-12 O96017-13 CHEK2 Serine/threonine-protein kinase Chk2 1 ILGET(0.102)S(0.898)LMR 87.777 0.004522699999999999 201450000.0 320140.0 283560.0 269430.0 284820.0 285000.0 258400.0 263010.0 323670.0 333750.0 346690.0 True False 302381.19601673237 269937.3519677623 286797.88890324207 311889.20716574456 307427.8785718192 256787.22975138712 289597.61753023916 322547.26431514573 273149.41315283463 343618.5963207386 0.8799907783060884 0.7855725937364543 0.8346401852929425 0.9076610244767505 0.8946776509291761 0.7473030636319176 0.8427879650026989 0.9386781384034157 0.7949203450498732 1.0 18.390448590347763 -13.999999013999426 0.42024651261932805 3.811530072675287 0.8455315363656858 0.3906695402266511 0.05683360051679739 1014.3751593495996 6.6198632271916455 2632.606743308818 0.034096969658071095 1.0000022703527998e-14 13.999999013999426 -2.965998536309601 ILGQSS(ph)PEKK ddPTM_KYSE-520_SHP099_60min_R1 4 ILGQSSPEKK 10 1 P29374-3;P29374-2;P29374;H7C485 P29374-3 ARID4A AT-rich interactive domain-containing protein 4A 1 ILGQS(0.013)S(0.987)PEKK;ILGQS(0.019)S(0.981)PEKK;ILGQS(0.012)S(0.988)PEKK;ILGQS(0.298)S(0.702)PEKK 218.62 3.6880999999999997e-09 3712090000.0 6755900.0 5892790.0 5380350.0 5072920.0 5095240.0 5834740.0 5596640.0 5812060.0 6957400.0 5524210.0 True False 6381136.759447238 5609691.523141885 5727175.969864374 5555048.791570988 5496206.400050103 5798323.223373086 6162402.989142768 5791899.320405006 5694111.54178137 5475269.797170351 1.1654470000263812 1.0245507036093462 1.0460079926699155 1.0145707878069985 1.003823848623966 1.0590022844846276 1.1254975950824435 1.057829026689843 1.0399691253066865 1.0 22.384498625444316 -6.509111619703487 24.636950111622713 1.065158290281476 1.045557831724857 0.0 0.051079823435858644 2598.8846205087593 4650858.877956381 0.01857184854159453 0.015704455569072868 3.09662332180293e-07 6.509111619703487 -0.01960045855661896 ILGS(ph)LDALPMEEEEEEDKYMLVR ddPTM_KYSE-520_SHP099_60min_R1 7 ILGSLDALPMEEEEEEDKYMLVR 23 1 Q9BWT1-3;Q9BWT1-5;Q9BWT1;Q9BWT1-6;Q9BWT1-2 Q9BWT1-3 CDCA7 Cell division cycle-associated protein 7 1 ILGS(1)LDALPMEEEEEEDKYMLVR;ILGS(1)LDALPMEEEEEEDKYMLVR;ILGS(1)LDALPMEEEEEEDKYMLVR;ILGS(1)LDALPMEEEEEEDKYMLVR;ILGS(1)LDALPMEEEEEEDKYMLVR;ILGS(1)LDALPMEEEEEEDKYMLVR;ILGS(1)LDALPMEEEEEEDKYMLVR 217.89 4.0224e-21 816519000.0 482765.0 531752.0 423628.0 483390.0 447658.0 499478.0 484281.0 551336.0 611714.0 590037.0 True False 455985.0630818318 506205.8357439759 450935.7387087656 529331.2402634973 482886.1377743991 496360.5725300432 533236.8496070942 549423.5440987903 500642.1576550507 584809.7312218392 0.7797152453827079 0.8655906506315538 0.7710811134531371 0.9051341179935036 0.8257149496563748 0.8487556653563206 0.9118125454120024 0.9394911109821705 0.8560769955196578 1.0 19.157607792342557 -13.999999997979497 0.022696995460901107 2.161088184656153 9.026264294262868e-16 0.6210646848073673 0.04141907804430788 1580.443673020727 2.7058925354795407 180.73912282811142 91.05723364881092 1.0000000046523798e-14 13.999999997979497 -2.161088184656152 ILGSAS(ph)PEEEQEKPILDRPTR ddPTM_KYSE-520_SHP099_60min_R1 12 ILGSASPEEEQEKPILDRPTR 21 2 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 ILGS(0.192)AS(0.808)PEEEQEKPILDRPTR;ILGS(0.084)AS(0.914)PEEEQEKPILDRPT(0.002)R;ILGS(0.214)AS(0.786)PEEEQEKPILDRPTR;ILGSAS(1)PEEEQEKPILDRPTR;ILGS(0.003)AS(0.997)PEEEQEKPILDRPTR;ILGS(0.037)AS(0.931)PEEEQEKPILDRPT(0.032)R;ILGSAS(1)PEEEQEKPILDRPTR;ILGS(0.047)AS(0.868)PEEEQEKPILDRPT(0.085)R;ILGSAS(1)PEEEQEKPILDRPTR;ILGSAS(1)PEEEQEKPILDRPTR;ILGS(0.166)AS(0.826)PEEEQEKPILDRPT(0.008)R;ILGS(0.187)AS(0.813)PEEEQEKPILDRPTR 326.63 1.3418e-54 107122640000.0 23144360.0 21157840.0 20174520.0 20070540.0 21629930.0 20555230.0 20033680.0 21648850.0 24872180.0 21198840.0 True False 21860496.213662196 20141385.60783468 21475001.839573298 21978038.08717214 23332082.433533162 20426937.18499459 22058879.88427515 21573755.192229584 20356019.088634267 21011034.770047963 1.0404293007417784 0.9586098841998489 1.022082066618953 1.0460235932074453 1.110468032102538 0.9722004369872337 1.0498711808197534 1.026782137497759 0.9688251583711885 1.0 24.324643879095188 -9.939749851441828 13.723211778520847 1.000000008258094 1.0227033152728835 0.021495547930798553 0.04344786705461591 0.0 0.0 0.04227694291008099 0.01025366477332186 1.1488151350904043e-10 9.939749851441828 0.02270330701478951 ILGSASPEEEQEKPILDRPT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 5 ILGSASPEEEQEKPILDRPTR 21 2 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 ILGS(0.008)AS(0.492)PEEEQEKPILDRPT(0.5)R;ILGSAS(0.023)PEEEQEKPILDRPT(0.977)R;ILGSAS(0.012)PEEEQEKPILDRPT(0.988)R;ILGSAS(0.001)PEEEQEKPILDRPT(0.999)R;ILGS(0.002)AS(0.275)PEEEQEKPILDRPT(0.723)R 179.33 2.2261e-09 59044400000.0 5705320.0 5289470.0 5145160.0 4945100.0 4828200.0 4702290.0 4941010.0 4970800.0 5913560.0 4991610.0 True False 5388834.526326545 5035355.921543661 5476825.246147071 5415080.817201477 5208151.871299849 4672941.263884095 5440495.510410587 4953557.454993442 4839806.572716337 4947388.2188138105 1.0892281519032634 1.0177806347186034 1.1070134389939181 1.094533232021117 1.0527073358614576 0.9445269013080365 1.0996702239217049 1.001246968280389 0.9782548606781322 1.0 22.238235680743543 -6.011838191046186 24.595579492449293 1.0094026801931046 1.0748563216255929 0.3899928624680905 0.042857500359559556 536.753568284019 1115186.334252945 0.013679726893814904 0.014436216899751463 9.73109716377304e-07 6.011838191046186 0.06545364143248822 ILHGFK ddPTM_KYSE-520_SHP099_60min_R1 1 ILHGFK 6 0 Q92973-3;Q92973-2;Q92973;K7ESG1;S4R398;O14787-2;O14787 Q92973-3 TNPO1;TNPO2 Transportin-1;Transportin-2 0 96.337 0.022685 310160000.0 1444500.0 1206100.0 804730.0 750120.0 1155100.0 1143600.0 899450.0 959400.0 884570.0 934670.0 False True 1364370.7054606397 1148157.1456069916 856604.183413524 821411.1792681987 1245999.7983800296 1136462.368203119 990375.1837860686 956072.0653256428 723954.3861950653 926389.5509622563 1.472782917341247 1.239389136475451 0.9246695221505412 0.8866800995488185 1.3450063173594617 1.2267650979252265 1.0690698991124732 1.0320410720658009 0.7814794385829178 1.0 19.821259455246743 -4.473492771172808 3.553761347457071 1.0488166215425958 1.456216325463178 0.4426103858482807 0.1544045259678526 0.24992557316711697 6.010248189287125 0.042750234322006704 0.19760708409448388 3.361299638802881e-05 4.473492771172808 0.4073997039205821 ILHS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 ILHSPK 6 0 Q8NDB2-3;Q8NDB2-2;Q8NDB2 Q8NDB2-3 BANK1 B-cell scaffold protein with ankyrin repeats 1 ILHS(1)PK;ILHS(1)PK;ILHS(1)PK;ILHS(1)PK 98.93299999999999 0.008301799999999998 1192520000.0 2169450.0 2042340.0 1839880.0 2467530.0 2569810.0 2155530.0 1925790.0 2555570.0 3125340.0 2166980.0 True False 2049106.2838086449 1944222.9207851614 1958481.6087120848 2702043.309310051 2772039.426781216 2142076.5377167473 2120467.647099194 2546705.3241445194 2557857.0394099816 2147782.243084929 0.9540568139093316 0.9052234820568268 0.9118622779463222 1.2580620395804274 1.2906519903058917 0.9973434432719834 0.9872824183765939 1.1857372097865024 1.1909294099275394 1.0 21.03441629973007 -5.239807946885945 24.558030293686034 1.1329597740113833 0.9218650708737399 0.4587068134293447 0.1026492323288286 620.3002569206521 704221.6284890143 0.029964293956252903 0.05183725746481123 5.756944638762435e-06 5.239807946885945 -0.21109470313764334 ILHTLLAS(ph)GEDALDFTQESEPSYISDVGPPGR ddPTM_KYSE-520_SHP099_60min_R1 3 ILHTLLASGEDALDFTQESEPSYISDVGPPGR 32 0 H3BVG0;Q8N1F7;Q8N1F7-2;H3BM93;H3BMX0;H3BP95 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 ILHT(0.186)LLAS(0.805)GEDALDFT(0.009)QESEPSYISDVGPPGR;ILHT(0.047)LLAS(0.953)GEDALDFTQESEPSYISDVGPPGR;ILHT(0.006)LLAS(0.994)GEDALDFTQESEPSYISDVGPPGR 160.6 4.0601e-10 199811000.0 53182.0 49741.2 50246.4 45931.5 41285.0 52545.9 33910.7 45308.2 66288.0 41201.5 True False 50231.88844431139 47351.55808893667 53485.3633410825 50296.815950190976 44533.8946204827 52217.941547188064 37338.724492539004 45151.036429213345 54251.77018449472 40836.48676428194 1.230073701840758 1.1595404463234384 1.3097444853621452 1.2316636404232406 1.0905417715667631 1.2787079811395783 0.9143471304979573 1.105654281423278 1.3285121831769966 1.0 15.317571133478951 -5.750008971728143 23.740585489651234 1.1225999761209808 1.233025194229328 0.18203172126847722 0.11738009332811372 221.43729342110882 459913.3794873388 0.03466948521261052 0.04430601194714299 1.7782426744244912e-06 5.750008971728143 0.11042521810834716 ILIEDWK ddPTM_KYSE-520_SHP099_60min_R1 3 ILIEDWK 7 0 K7ELL7;P14314-2;P14314;K7EPW7 K7ELL7 PRKCSH Glucosidase 2 subunit beta 0 ;; 115.46 0.034616 4156515000.0 5078950.0 4606720.0 3399210.0 3173970.0 5067430.0 4848760.0 4038700.0 3979110.0 3816530.0 3941450.0 False True 4797210.518864193 4385406.256372305 3618328.5155283026 3475623.1545111197 5466207.911267348 4818497.090283805 4446971.209913604 3965307.3961412585 3123544.3588919556 3906531.8194016977 1.2279972980224967 1.1225830120190723 0.9262252767423933 0.8896953398023074 1.399248275444617 1.2334462671858586 1.1383425031450727 1.0150454621789213 0.7995696703093385 1.0 21.897456934571853 -7.496050476065237 4.071902229134095 0.8983278354263362 1.1287258648767735 0.2932309184405052 0.14597134827165792 0.2932686267766079 10.90822117347835 0.1054216109723635 0.04197464016761953 3.191166938779431e-08 7.496050476065237 0.2303980294504373 ILIPS(ph)DIES(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 ILIPSDIESSK 11 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 2 ILIPS(1)DIES(0.978)S(0.022)K 100.11 0.0016896 32590000.0 161380.0 132420.0 118400.0 121310.0 132660.0 129720.0 122670.0 141790.0 151750.0 139280.0 True False 152427.92969694576 126058.34443352767 126032.25344669825 132839.26592681868 143099.5872678511 128910.3693628091 135070.68074382885 141298.1635840349 124196.02530619533 138046.08755820038 1.1041814541298172 0.9131612975295756 0.9129722955282084 0.9622820050645297 1.0366073374409845 0.9338212450857062 0.9784462793042425 1.0235579007225644 0.8996707368025489 1.0 17.074790474710728 ILIPS(ph)DIES(ph)SKS(ph)STRR ddPTM_KYSE-520_SHP099_60min_R1 1 ILIPSDIESSKSSTRR 16 2 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 3 ILIPS(1)DIES(0.516)S(0.387)KS(0.416)S(0.368)T(0.314)RR 86.74799999999999 0.0073976 72111000.0 113150.0 108850.0 104020.0 108110.0 105000.0 104140.0 99919.0 105830.0 127160.0 99148.0 True False 106873.34394106704 103620.68261281896 110725.29563788458 118384.74189554318 113262.90263172302 103490.02363122835 110019.78763546627 105462.90043090774 104070.94944274018 98269.62585597676 1.0875521608039886 1.0544528048237882 1.1267499461142019 1.204693117169765 1.1525728488853748 1.0531232080083683 1.119570637184581 1.0731993686988632 1.0590347580570398 1.0 16.584457942620784 -7.877505360057272 0.8516269822676014 1.0010641773939877 1.1189215599624682 0.42664307563629866 0.042274515384548385 0.6379055566860545 1.0425910564310779 0.04492955010012705 0.01648586663959775 1.3258507540255193e-08 7.877505360057272 0.11785738256848055 ILIPS(ph)DIESSK ddPTM_KYSE-520_SHP099_60min_R1 13 ILIPSDIESSK 11 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 ILIPS(0.994)DIES(0.004)S(0.002)K;ILIPS(0.983)DIES(0.006)S(0.01)K;ILIPS(1)DIESSK;ILIPS(1)DIESSK;ILIPS(1)DIESSK;ILIPS(1)DIESSK;ILIPS(1)DIESSK;ILIPS(1)DIESSK;ILIPS(1)DIESSK;ILIPS(1)DIESSK;ILIPS(1)DIESSK;ILIPS(1)DIESSK;ILIPS(1)DIESSK 195.77 5.5862e-07 7198081000.0 12227290.0 10716740.0 9575750.0 9025230.0 10001140.0 10450810.0 9601720.0 9559550.0 11458130.0 10089940.0 True False 11549017.849201683 10201891.724245308 10193018.16674171 9882985.145665644 10788172.81929742 10385582.618258864 10572355.561356805 9526390.152265735 9377622.427951744 10000550.981454529 1.154838155479503 1.0201329649900446 1.0192456581286473 0.9882440641513748 1.0787578443731243 1.0385010423444023 1.0571773076266153 0.952586529475416 0.9377105766814277 1.0 23.253576151842953 -7.263086576603735 24.913000316755635 0.9588614084514036 1.046752796874996 0.44364751722150464 0.04466673931726733 132.34662653136223 2001627.0485163017 0.022803495199542438 0.011871826767650489 5.456490751068143e-08 7.263086576603735 0.08789138842359234 ILIPS(ph)DIESSKS(ph)STR ddPTM_KYSE-520_SHP099_60min_R1 1 ILIPSDIESSKSSTR 15 1 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 2 ILIPS(1)DIES(0.037)S(0.031)KS(0.601)S(0.277)T(0.054)R 85.97399999999999 0.004077900000000001 0.0 367510.0 337630.0 284480.0 295420.0 297910.0 287700.0 314200.0 285340.0 387010.0 276020.0 True False 347123.48768697854 321409.7480070382 302818.0359840932 323496.6279787385 321353.8221239676 285904.35758310376 345962.4022964952 284350.22213885636 316738.7397281754 273574.67754031083 1.2688436327804147 1.1748519669174387 1.106893513342343 1.182480158204963 1.1746475405298304 1.0450687912845156 1.2645995068221114 1.039387945899919 1.1577779879919785 1.0 18.061575172943815 -13.999999999285656 0.06057496316657808 0.4484560939597463 1.3859579201296819 0.38091928798037944 0.06880533707149043 430.63609100247976 1.899973010175281 35.28730514471781 5.772575160564054 1.0000000016448381e-14 13.999999999285656 0.9375018261699356 ILIPS(ph)DIESSKSS(ph)TR ddPTM_KYSE-520_SHP099_60min_R1 1 ILIPSDIESSKSSTR 15 1 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 2 ILIPS(1)DIES(0.04)S(0.034)KS(0.094)S(0.83)T(0.001)R 109.66 0.00068767 0.0 304190.0 286010.0 253900.0 228320.0 266930.0 257200.0 228740.0 236330.0 307880.0 240640.0 True False 287315.97431226855 272269.6502902379 270266.8002543637 250019.4641530887 287935.8723760554 255594.71939650428 251863.2714872706 235510.22638983675 251976.75302320538 238508.11681508727 1.2046381404076971 1.141552974909133 1.1331555666254267 1.0482639647309195 1.2072372052616094 1.071639501454217 1.055994549999057 0.9874306565944893 1.0564703473742163 1.0 17.863678838737265 -6.62947399282001 2.4178059320186716 1.0200377733415902 1.1405597962203995 0.6031604900155838 0.046455525965861666 0.21064195958434792 2.503852441225824 0.020380213162810353 0.01479152952430804 2.347069809808062e-07 6.62947399282001 0.12052202287880931 ILIVT(ph)QTPHYMR ddPTM_KYSE-520_SHP099_60min_R1 1 ILIVTQTPHYMR 12 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 ILIVT(0.77)QT(0.23)PHY(0.001)MR 84.71799999999999 0.017862 545060000.0 245860.0 355670.0 327660.0 320710.0 248090.0 270010.0 323800.0 329010.0 406020.0 434340.0 True False 232221.6556902411 338583.07932844624 348781.4878745364 351190.18197502283 267613.27156099176 268324.7674348762 356532.8639834664 327868.7411015109 332297.002931278 430492.08551140677 0.5394330430357887 0.7865024485321804 0.8101925670949292 0.8157877782069406 0.621645044282471 0.6232977944672722 0.8281984175386642 0.7616138650075678 0.7719003766039576 1.0 18.71562718871769 -8.817370130049243 0.6015263813136185 1.0132807480729737 0.7166169482933604 0.46110067160687884 0.09140530574277118 3.0654233023342763 1.5023103827681983 0.19234077821057305 0.04015471507116113 1.5227544241275266e-09 8.817370130049243 -0.2966637997796133 ILIVTQT(ph)PHYMR ddPTM_KYSE-520_SHP099_60min_R1 1 ILIVTQTPHYMR 12 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 ILIVT(0.004)QT(0.996)PHYMR 169.54 1.0905e-05 484850000.0 277750.0 336060.0 320630.0 327150.0 292710.0 285250.0 266560.0 353140.0 409430.0 358370.0 True False 262342.6538191023 319915.1731636559 341298.3228261389 358242.23763876595 315744.61170792027 283469.6489418852 293506.4861749003 351915.0397634953 335087.832890383 355195.12060764106 0.738587437153715 0.9006744591996904 0.9608755949188474 1.0085787130913062 0.8889328523651118 0.7980674071674935 0.82632465691756 0.9907654113082004 0.9433908672989089 1.0 18.43825223764648 -13.999999999999993 0.014883338940067225 2.0811638810811983 3.9957748166975353e-13 0.2036974251651854 0.07845432054312564 12461.025822478836 14.035700472179315 1226.7817724808747 782.1777270989995 1.0000000000000164e-14 13.999999999999993 -2.0811638810807986 ILIVTQT(ph)PPYVK ddPTM_KYSE-520_SHP099_60min_R1 1 ILIVTQTPPYVK 12 0 A0A3B3ISF0;H0Y9K3;D6R9W6;D6RJB0;Q659C4-4;Q659C4-9;Q659C4-2;Q659C4 A0A3B3ISF0 LARP1B La-related protein 1B 1 ILIVT(0.046)QT(0.954)PPYVK 140.1 0.008778600000000001 0.0 185940.0 220660.0 176350.0 158390.0 155230.0 222840.0 150380.0 202510.0 233690.0 201750.0 True False 175625.5375377997 210059.16238258738 187717.80316997654 173443.33797831004 167445.71786211774 221449.1729016988 165581.87796736776 201807.54007618927 191257.78684550108 199962.65195912475 0.8782917000605699 1.0504919810001645 0.938764320891027 0.8673786643606045 0.8373849627496742 1.1074526704465102 0.828064022681671 1.0092261634809767 0.9564675451723701 1.0 17.60937104011213 ILKS(ph)PEIQR ddPTM_KYSE-520_SHP099_60min_R1 13 ILKSPEIQR 9 1 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 1 ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR;ILKS(1)PEIQR 156.08 0.0001246 81105980000.0 61745200.0 55447500.0 54497100.0 47799330.0 51399600.0 52090910.0 50294940.0 50795930.0 61027190.0 50016480.0 True False 58320070.669995405 52783718.87160577 58010070.26444306 52342163.95180738 55444456.096281 51765791.30854809 55379243.366512015 50619730.77468921 49946190.66626679 49573372.89943266 1.1764394322796392 1.0647594824480835 1.1701860670672048 1.0558523838592069 1.1184321915871802 1.0442257260477938 1.1171167126121815 1.0211072560541574 1.0075205245281666 1.0 25.56306208520943 -6.804136559590466 0.3891619436190013 0.9879185816153362 1.1427517745228353 0.5484976340384005 0.04111820349612324 0.9653625734505896 0.3558297785689589 0.044524997838940664 0.05215469245929792 1.5698690969567095e-07 6.804136559590466 0.15483319290749908 ILKSPEIQR ddPTM_KYSE-520_SHP099_60min_R1 2 ILKSPEIQR 9 1 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 ; 65.5 0.031771 714550000.0 466260.0 362800.0 380220.0 345530.0 429010.0 412530.0 480090.0 375670.0 555050.0 507760.0 False True 440395.62833373394 345370.5434260975 404729.58957350947 378369.067312617 462770.64626700396 409955.24724976654 528622.1824268765 374366.88845203695 454266.9116718537 503261.6414313023 0.8750828437494776 0.6862643901169294 0.8042130698108393 0.751833710664925 0.9195428543905316 0.8145966501317933 1.0503923583833004 0.7438812292296271 0.90264561070042 1.0 18.940949114342406 -5.760921297324342 24.99996526858428 0.8951023248110779 0.7744756666547525 0.3064052165402217 0.09188131359536969 17.677560176934854 852993.3321847742 0.026410405241843037 0.032049152476689484 1.7341182255057803e-06 5.760921297324342 -0.12062665815632534 ILLAQTAT(ph)FQS(ph)PSLR ddPTM_KYSE-520_SHP099_60min_R1 1 ILLAQTATFQSPSLR 15 0 Q6IV72 Q6IV72 ZNF425 Zinc finger protein 425 2 ILLAQT(0.147)AT(0.853)FQS(0.999)PS(0.001)LR 95.755 0.004367899999999999 274140000.0 845330.0 1009900.0 623000.0 457340.0 628040.0 819250.0 507230.0 802010.0 1040300.0 834300.0 True False 798437.8597764231 961382.8881091962 663159.5768352435 500805.4560957156 677463.1749412115 814136.756864642 558505.7584877504 799228.0145005422 851407.7438288975 826908.7510755783 0.96556948845671 1.1626227039666766 0.8019743121265283 0.6056356949231786 0.819271986250019 0.984554530116747 0.6754140136517963 0.9665250409564161 1.0296272021809576 1.0 19.65736861201483 -9.451877676771987 8.48126742778534 1.0000098701113505 0.8838112705846569 0.0396603091012403 0.15948258660836692 0.0 0.0 0.1644352895337361 0.03988141572509507 3.532826612475971e-10 9.451877676771987 -0.11619859952669354 ILLDHEK ddPTM_KYSE-520_SHP099_60min_R1 1 ILLDHEK 7 0 P54136-2;P54136 P54136-2 RARS Arginine--tRNA ligase, cytoplasmic 0 92.925 0.011569 312630000.0 405910.0 378590.0 270590.0 243080.0 348950.0 394310.0 304860.0 339570.0 329800.0 340190.0 False True 383393.3631384763 360401.9681248242 288032.6643593075 266182.2501153329 376410.3797460922 391848.9650281318 335678.2239468799 338392.1109262336 269916.6335814384 337176.18126381526 1.1370713129896313 1.0688832371668522 0.8542497375695212 0.7894455922646122 1.1163611211658486 1.1621490093380562 0.995557345387445 1.0036062145844962 0.8005210586635381 1.0 18.363143099725455 -4.534409953201736 24.11514499051268 0.9718640565941179 1.1200243581500329 0.19042915965736262 0.11670774547032073 218.95568320736317 457901.1052032122 0.03230277267808998 0.08564851210574004 2.9213934203412524e-05 4.534409953201736 0.14816030155591497 ILLDHEKEWK ddPTM_KYSE-520_SHP099_60min_R1 2 ILLDHEKEWK 10 1 P54136-2;P54136 P54136-2 RARS Arginine--tRNA ligase, cytoplasmic 0 ; 183.0 5.0401e-06 1449430000.0 3622600.0 3658400.0 2708400.0 1643990.0 3089600.0 2648400.0 1674720.0 1831560.0 2910400.0 2075500.0 False True 3421647.156525935 3482644.97262965 2882987.797593216 1800234.315316384 3332733.9425806766 2631870.3532258985 1844017.0412921286 1825206.7458493197 2381944.7252135184 2057112.6847145653 1.6633250973320919 1.692977248406246 1.4014729572256004 0.8751267388962581 1.6201027621601147 1.2794001868648648 0.8964103206373428 0.8872662929024602 1.1579067801742835 1.0 20.972189393437958 -3.221320494500401 0.3166651806191707 0.9574222028152598 3.0919880570484826 0.5255689722875587 0.21736694338346282 11.596934842219751 0.5632763245835269 0.23217918428615422 10.784320946803975 0.0006007302554471093 3.221320494500401 2.1345658542332226 ILLENY(ph)VRSIENER ddPTM_KYSE-520_SHP099_60min_R1 1 ILLENYVRSIENER 14 1 H0Y9S3;A0A494C037;E7EUS2;Q8TBZ0-2;Q8TBZ0 H0Y9S3 CCDC110 Coiled-coil domain-containing protein 110 1 ILLENY(0.975)VRS(0.025)IENER 56.482 0.044539999999999996 20677000.0 35098.0 36205.0 28757.0 11652.0 26225.0 35235.0 24421.0 29950.0 25088.0 25770.0 True False 33151.04397387161 34465.657455187065 30610.72223282683 12759.40257669845 28288.758300161266 35015.085295240366 26889.713005992067 29846.110440382563 20532.651617013697 25541.697848756627 1.2979185710430525 1.349387877786083 1.1984607450172684 0.49955185642913635 1.1075519907748954 1.3708988925708752 1.0527770379720884 1.1685249201957604 0.8038874995153554 1.0 14.640566808919246 -5.0084870441465785 24.719816314089897 1.0156670099829115 1.3112211216339076 0.2701536036240687 0.21736599598517245 506.928125855934 1476523.3075558718 0.06059186489274467 0.11710920315968583 9.806475685197054e-06 5.0084870441465785 0.2955541116509961 ILLVDS(ph)PGMGNADDEQQEEGTSSK ddPTM_KYSE-520_SHP099_60min_R1 1 ILLVDSPGMGNADDEQQEEGTSSK 24 0 Q9UKN8 Q9UKN8 GTF3C4 General transcription factor 3C polypeptide 4 1 ILLVDS(1)PGMGNADDEQQEEGTSSK 167.88 1.5834000000000002e-10 237630000.0 63411.0 66280.0 43019.0 43643.0 51090.0 93978.0 49314.0 66417.0 68507.0 68452.0 True False 59893.4654233054 63095.80931169179 45792.07357283364 47790.817598253605 55110.49233766404 93391.4484426308 54299.14037826027 66186.61492884428 56067.85572093261 67845.56853485013 0.8827911198435904 0.929991607031511 0.6749456826986673 0.7044058828058161 0.8122931759257869 1.3765298229413254 0.8003343704072362 0.9755480919117998 0.8264040958273099 1.0 16.049966965840817 -6.03957833616892 24.999597043529835 0.9945085846578896 0.7936271001190642 0.26698327319673965 0.16151898733681946 743.3107129773329 469509.449134069 0.05383426018000562 0.053842831846486854 9.128967560549047e-07 6.03957833616892 -0.20088148453882537 ILMDS(ph)PEDADLFHSEEIKAPEK ddPTM_KYSE-520_SHP099_60min_R1 2 ILMDSPEDADLFHSEEIKAPEK 22 1 Q9Y478 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 ILMDS(1)PEDADLFHSEEIKAPEK;ILMDS(1)PEDADLFHSEEIKAPEK 225.48 5.0227e-20 299226000.0 302035.0 281539.0 227803.0 285580.0 299005.0 293070.0 299546.0 330301.0 324320.0 294627.0 True False 285280.516458155 268013.44384134543 242487.54587768696 312721.4373372425 322534.99239426985 291240.8414212036 329827.0329672372 329155.26292383333 265431.66344187973 292016.8339963378 0.9769317492899493 0.9178013478658105 0.8303889284709115 1.0709020882719533 1.104508216119879 0.9973426443793856 1.129479518195768 1.127179068477817 0.9089601438703652 1.0 18.155692013483886 -5.278195345354588 24.555387176211745 1.0572343631609242 0.9093167421435066 0.43713766020037836 0.07228738993098312 542.6869652431311 795290.9809040908 0.020135299492474782 0.029962468272142228 5.2699276712586816e-06 5.278195345354588 -0.14791762101741768 ILMEHIHK ddPTM_KYSE-520_SHP099_60min_R1 2 ILMEHIHK 8 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 0 ; 128.69 0.00092348 4102800000.0 14007300.0 11164200.0 8676600.0 8454600.0 14125400.0 11412900.0 9206600.0 10448300.0 9702700.0 8733600.0 False True 13230287.14613971 10627855.074194169 9235907.51905086 9258122.64203183 15236988.617467977 11341667.85769971 10137292.975757198 10412057.285951557 7940934.265162586 8656227.09863799 1.5284126670176459 1.2277698994133832 1.0669668683373705 1.069533243124888 1.7602343889366572 1.3102322441938081 1.1710983157260564 1.2028401250690195 0.9173666742652868 1.0 23.045306918509812 -7.480165252500555 1.6726444594189567 0.9607395361062733 1.309983340149905 0.3165019925196838 0.19972377802660077 0.5229412275821083 2.5989300476012684 0.18471658022946355 0.061752516284466784 3.310051474288268e-08 7.480165252500555 0.34924380404363176 ILNDLS(ph)SDAPGVPR ddPTM_KYSE-520_SHP099_60min_R1 5 ILNDLSSDAPGVPR 14 0 C9J4L5;C9JBT4;H7C3I0;E7EWP8;C9J896;P16220-3;P16220;P16220-1 C9J4L5 CREB1 Cyclic AMP-responsive element-binding protein 1 1 ILNDLS(0.5)S(0.5)DAPGVPR;ILNDLS(0.5)S(0.5)DAPGVPR;ILNDLS(0.97)S(0.03)DAPGVPR;ILNDLS(0.811)S(0.189)DAPGVPR;ILNDLS(0.752)S(0.248)DAPGVPR 227.63 2.1946e-14 654800000.0 1448130.0 1355880.0 1298970.0 1143420.0 1225230.0 1312890.0 1150750.0 1650370.0 1811700.0 1338350.0 True False 1367799.342124415 1290741.4895826278 1382703.6846254838 1252090.293018243 1321648.6303949128 1304695.766518183 1267079.0402377222 1644645.2516692528 1482740.9492404244 1326493.2602205449 1.0311393077843476 0.9730479063029894 1.0423752054311932 0.9439100299763818 0.9963477916014238 0.9835675805101809 0.9552095575872399 1.239844408554184 1.117790036109118 1.0 20.339185914720336 -7.242521867934725 24.945503516325843 1.134112929611757 0.9890784819090392 0.4804104237253035 0.06129356524166462 544.3429203711931 717796.8745318714 0.027055340073873963 0.015586749406913231 5.721081466911124e-08 7.242521867934725 -0.14503444770271767 ILNDLSS(ph)DAPGVPR ddPTM_KYSE-520_SHP099_60min_R1 2 ILNDLSSDAPGVPR 14 0 C9J4L5;C9JBT4;H7C3I0;E7EWP8;C9J896;P16220-3;P16220;P16220-1 C9J4L5 CREB1 Cyclic AMP-responsive element-binding protein 1 1 ILNDLS(0.244)S(0.756)DAPGVPR;ILNDLS(0.379)S(0.621)DAPGVPR 114.27 0.0010218999999999998 177090000.0 466290.0 410770.0 425060.0 366150.0 385820.0 411510.0 373400.0 515270.0 565040.0 404950.0 True False 440423.96417393035 391035.99262165953 452460.04772004584 400948.78591298877 416181.8389844894 408941.61344811576 411146.91603281745 513482.64863492147 462442.97949925944 401362.45804633305 1.0973222715391284 0.9742714715398683 1.127310336702727 0.9989693302772814 1.036922688310937 1.0188835683304187 1.024378109587307 1.279348973330349 1.1521829464326114 1.0 18.614546153112084 -7.2191306962013835 24.999143700549396 1.1618245914857874 1.0380973112581773 0.27393878214643497 0.07597513592049399 474.36759440825455 280292.29543537117 0.03332946436382015 0.01924254626668646 6.037669049496668e-08 7.2191306962013835 -0.12372728022761015 ILNDVQDR ddPTM_KYSE-520_SHP099_60min_R1 1 ILNDVQDR 8 0 Q13838-2;Q13838;A0A0G2JJZ9;H0Y400;O00148 Q13838-2;O00148 DDX39B;DDX39A Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A 0 163.15 0.0014915999999999998 269380000.0 362560.0 434570.0 354820.0 277510.0 396870.0 472680.0 364560.0 387180.0 395190.0 470610.0 False True 342448.07405455865 413692.60489713115 377692.2649320729 303884.4669635762 428101.41111858917 469729.8287882562 401413.28256273223 385836.96294849087 323433.45792919537 466440.7615290394 0.7341727016566469 0.8869134925965849 0.80973254501592 0.6514963785913833 0.9178044597029427 1.0070514147357854 0.8605879152732265 0.827193922082793 0.6934073618886741 1.0 18.83133434334878 -5.82155342341481 24.9999995375967 0.8806485048375585 0.781679277781365 0.23187494807145637 0.10049280983807418 132.00571222536917 54896.85793049806 0.032637977766311645 0.03700800513722511 1.5081570777733903e-06 5.82155342341481 -0.09896922705619349 ILNELS(ph)SDVPGVPK ddPTM_KYSE-520_SHP099_60min_R1 2 ILNELSSDVPGVPK 14 0 C9IYM9;C9K092;J3KR46;A0A0A0MSU8;G5E998;Q03060-25;Q03060-22;Q03060-6;Q03060;Q03060-15;Q03060-16;Q03060-31;Q03060-20;Q03060-21;Q03060-26;Q03060-12;Q03060-7;Q03060-2;Q03060-32;Q03060-30;Q03060-13;Q03060-14;Q03060-1 C9IYM9 CREM cAMP-responsive element modulator 1 ILNELS(0.797)S(0.203)DVPGVPK;ILNELS(0.979)S(0.021)DVPGVPK 148.03 3.4431e-06 78265000.0 307040.0 266040.0 195888.0 196452.0 211528.0 304300.0 225632.0 289300.0 306270.0 218620.0 True False 290007.87913093454 253259.0390658189 208515.25391188174 215122.7390145526 228174.05017031546 302400.75082564633 248441.0845161133 288296.48582312785 250659.0884384083 216683.19688378638 1.3383957930363855 1.1687987010900953 0.962304677569044 0.9927984361885213 1.0530306615915952 1.3955892989147323 1.1465636841667959 1.3304976572675813 1.1567998443960756 1.0 17.725227755637913 -6.158674172741041 24.62626737463579 1.2230432540317075 1.092770773361943 0.11082176364968421 0.140004470490829 60.33399312657479 14440.011655450377 0.046651087783629364 0.04665108613185059 6.939462404552874e-07 6.158674172741041 -0.1302724806697646 ILNLLS(ph)PSDGER ddPTM_KYSE-520_SHP099_60min_R1 2 ILNLLSPSDGER 12 0 A0A494C1S7;Q9Y5Q9-2;Q9Y5Q9 A0A494C1S7 GTF3C3 General transcription factor 3C polypeptide 3 1 ILNLLS(0.678)PS(0.322)DGER;ILNLLS(0.713)PS(0.287)DGER 102.29 0.0011484000000000002 71800000.0 121513.0 122014.0 109468.0 105639.0 94586.0 116394.0 105024.0 92861.0 130050.0 114167.0 True False 114772.43165983986 116152.26429325211 116524.48243499274 115678.89879847648 102029.38007927756 115667.5418718379 115640.85085546496 92538.88686492041 106436.19829371154 113155.56920058189 1.0142888456191836 1.0264829660072516 1.0297724032339852 1.0222996500810464 0.9016735172655813 1.0221992844806713 1.0219634055348845 0.8178023186899805 0.9406182925476744 1.0 16.787948066203228 -6.14493127061592 0.7247481392722989 0.9290612709714572 1.0283030889291465 0.20810717559120018 0.06005089530802004 1.032564927184349 1.2023538131445883 0.043020946216970946 0.048653331183118896 7.162567526393503e-07 6.14493127061592 0.09924181795768927 ILPGSMIVS(ph)S(ph)DDTVDSTIDR ddPTM_KYSE-520_SHP099_60min_R1 1 ILPGSMIVSSDDTVDSTIDR 20 0 Q9UK59-2;Q9UK59 Q9UK59-2 DBR1 Lariat debranching enzyme 2 ILPGSMIVS(0.999)S(0.998)DDT(0.003)VDSTIDR 108.71 5.6745e-07 0.0 166900.0 172630.0 144750.0 145300.0 165020.0 154290.0 122570.0 148550.0 199110.0 135800.0 True False 157641.7242930986 164336.59567708723 154080.81660818867 159109.26831396195 178006.13516463744 153327.01887903063 134960.57176792296 148034.71472183074 162956.6431546397 134596.91765080122 1.1712134798070557 1.2209536335998625 1.1447573933894724 1.1821167311331429 1.3225127162752512 1.1391569848339533 1.0027018012259776 1.099837331385943 1.2107011512508412 1.0 17.03828584619172 -6.51922954186974 24.96030605556502 1.0843869150830583 1.206707968909963 0.4320867071238851 0.07021662972538734 156.66965365946646 1071624.5871810948 0.026581991430997584 0.021038007706770123 3.0253140069399955e-07 6.51922954186974 0.12232105382690461 ILPGSMIVS(ph)SDDTVDSTIDR ddPTM_KYSE-520_SHP099_60min_R1 2 ILPGSMIVSSDDTVDSTIDR 20 0 Q9UK59-2;Q9UK59 Q9UK59-2 DBR1 Lariat debranching enzyme 1 ILPGSMIVS(0.911)S(0.089)DDTVDSTIDR;ILPGSMIVS(0.851)S(0.149)DDTVDSTIDR 269.0 1.9048999999999998e-35 192548000.0 172282.0 184810.0 147719.0 131212.0 148519.0 154512.0 126715.0 150019.0 164505.0 180348.0 True False 162725.17402434736 175931.45019453438 157241.20309875673 143682.34902967367 160206.60034248425 153547.63329468374 139524.58881922462 149498.61910369768 134635.03883357922 178750.25702862075 0.9103493149008031 0.9842304739531925 0.8796698013898795 0.803816181403688 0.8962594124652511 0.8590065035268639 0.780556017868464 0.8363547084565064 0.753201931407696 1.0 17.447585790809796 -4.9556204442535 5.472302963039345 0.839988813534599 0.9458458862321714 0.2572470337702947 0.06655307783585519 0.21858171255543132 15.46867318154556 0.01668251302815354 0.03521877054112706 1.1075913509857548e-05 4.9556204442535 0.10585707269757239 ILPGSMIVSS(ph)DDTVDSTIDR ddPTM_KYSE-520_SHP099_60min_R1 2 ILPGSMIVSSDDTVDSTIDR 20 0 Q9UK59-2;Q9UK59 Q9UK59-2 DBR1 Lariat debranching enzyme 1 ILPGSMIVS(0.44)S(0.56)DDTVDSTIDR;ILPGSMIVS(0.209)S(0.791)DDTVDSTIDR 227.64 2.5515e-19 190911000.0 120342.0 107777.0 110323.0 95796.0 95689.0 100181.0 91481.0 85947.0 124520.0 112362.0 True False 113666.38936417068 102599.23114342484 117434.59710304104 104900.42303788246 103219.17990406597 99555.733218745 100728.79224852218 85648.86991718071 101910.30689375587 111366.56009631316 1.0206509859500783 0.9212750313441839 1.0544870650712392 0.9419382528037268 0.9268417720256323 0.8939463797090096 0.904479694455938 0.7690717019822556 0.9150889351850391 1.0 16.764956575826485 -5.852878646994106 1.5948311645838404 0.8812129726696483 0.9912673193064463 0.3079371097447541 0.06263428071582061 0.40795402744184933 2.1476541390668147 0.022831679675475548 0.028574085735336877 1.4032057414244344e-06 5.852878646994106 0.11005434663679803 ILPPLEGPPAQAS(ph)PSSTMLGEGSQPDWPGGSR ddPTM_KYSE-520_SHP099_60min_R1 1 ILPPLEGPPAQASPSSTMLGEGSQPDWPGGSR 32 0 A0A0C4DFT8;G3XAA4;Q9NQC1-2;Q9NQC1;D6R9B8;C9J929;B5MBX1;Q9NQC1-3 A0A0C4DFT8 JADE2 Protein Jade-2 1 ILPPLEGPPAQAS(0.632)PS(0.122)S(0.122)T(0.122)MLGEGS(0.003)QPDWPGGSR 77.791 0.0080187 78965000.0 47303.0 89181.0 59790.0 46643.0 64927.0 70134.0 63582.0 67554.0 98399.0 52956.0 True False 44679.008293807296 84896.61089659002 63644.15906738245 51075.93669627066 70036.38551590369 69696.26769111371 70009.48906052117 67319.67094122207 80532.22203693134 52486.851039144596 0.851241928392423 1.6174834118601302 1.2125733932850487 0.9731187084966924 1.3343605899250972 1.32788053219528 1.3338481481449178 1.282600682045398 1.5343313695247323 1.0 15.679668424869407 ILPPLS(ph)PPQHR ddPTM_KYSE-520_SHP099_60min_R1 2 ILPPLSPPQHR 11 0 A0A087WV20;A0A087WTU9;Q8TCU4-3;Q8TCU4-2;Q8TCU4 A0A087WV20 ALMS1 Alstrom syndrome protein 1 1 ILPPLS(1)PPQHR;ILPPLS(1)PPQHR 151.99 3.2526e-05 794450000.0 425360.0 422260.0 367690.0 285710.0 321400.0 351940.0 346730.0 348920.0 436800.0 376650.0 True False 401764.4328658618 401973.9957748178 391391.8857248012 312863.7924981561 346692.3514841499 349743.4119144858 381780.8521587005 347709.6779585401 357488.1308319352 373313.1740292662 1.076212844378123 1.0767742039109092 1.0484277356204892 0.8380732700143844 0.9286903747387459 0.9368632993569826 1.0226825055168571 0.9314155035184509 0.9576092024116717 1.0 18.510026895939646 -5.042501315717442 14.739085934596334 0.9443079315496185 1.0730246615312622 0.6000378128671904 0.046039850951348084 2.883722912300661 1000.0231709441977 0.012788023327188425 0.02219794844623157 9.067732174637015e-06 5.042501315717442 0.12871672998164374 ILQDSNDS(ph)PLAEREPGEVIDSLVGK ddPTM_KYSE-520_SHP099_60min_R1 3 ILQDSNDSPLAEREPGEVIDSLVGK 25 1 A0A1W2PR54;Q5JUX0 A0A1W2PR54 SPIN3 Spindlin-3 1 ILQDS(0.223)NDS(0.777)PLAEREPGEVIDSLVGK;ILQDS(0.025)NDS(0.975)PLAEREPGEVIDSLVGK;ILQDSNDS(1)PLAEREPGEVIDSLVGK 120.57 0.00014702 122853000.0 168793.0 166812.0 131230.0 114305.0 131301.0 149634.0 123346.0 145817.0 203005.0 151913.0 True False 159429.71580949667 158798.10113008335 139689.2957754239 125168.51283294872 141633.64169950326 148700.07870208586 135815.0174209532 145311.19486094356 166144.40933959922 150567.16900652545 1.0588610841357264 1.0546661810663465 0.927754016344492 0.8313134507265925 0.940667495005933 0.9875996187166229 0.902022787019839 0.9650921633164657 1.1034570845414426 1.0 17.200047700787614 -9.99206038955495 7.367054105145233 1.0000000011885646 0.9683358045534419 0.0037752053812624142 0.07737706044598049 1.6052918160621035e-09 2.41920507173345e-10 0.07973612862070727 0.019338851072572303 1.0184497606407911e-10 9.99206038955495 -0.031664196635122654 ILRLS(ph)TFEK ddPTM_KYSE-520_SHP099_60min_R1 1 ILRLSTFEK 9 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 ILRLS(0.951)T(0.049)FEK 137.88 0.00029576 795210000.0 314820.0 373230.0 364680.0 339070.0 282460.0 210520.0 270490.0 363390.0 326350.0 382770.0 True False 297356.30702188937 355299.4705703489 388187.85630863014 371295.1108548868 304687.9950224424 209206.06659157097 297833.7689280044 362129.4849058633 267093.06661401567 379378.9555905542 0.7837975792806282 0.9365292020936629 1.0232192655609051 0.978691899968242 0.8031230792655716 0.5514435197543145 0.7850561148400712 0.9545323470622143 0.7040271018677077 1.0 18.533280128127704 -5.822934888181546 6.899240551233032 0.7832575840677696 0.9373684499820614 0.18906028041846268 0.1300875857845486 0.32626304985651955 29.291876956822414 0.041448215355091134 0.0473707510219704 1.5033673422990903e-06 5.822934888181546 0.1541108659142918 ILRPWQSSETR ddPTM_KYSE-520_SHP099_60min_R1 1 ILRPWQSSETR 11 1 Q15637-5;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-6 Q15637-5;Q15637-6 SF1 Splicing factor 1 0 96.756 0.0022676 534070000.0 1203400.0 1052600.0 742380.0 679380.0 1268100.0 1144900.0 927270.0 962970.0 927330.0 1044900.0 False True 1136645.0030815736 1002031.5160151882 790235.0026499976 743948.0709369548 1367892.2554979813 1137754.2544209096 1021007.5008831044 959629.6818288874 758950.248086946 1035642.9989199 1.097525889005199 0.9675452999346627 0.7630380386621209 0.7183441318222962 1.3208144668815345 1.0985969640189757 0.9858682016369933 0.9266027799441613 0.7328299895605683 1.0 19.98209534025487 -7.526081013218389 24.61000066605695 0.8541821093784054 0.987000326519821 0.08027337686664582 0.17169910340014805 230.11342427616728 1768340.278114615 0.1223965126931824 0.046811393934129364 2.9779608693024355e-08 7.526081013218389 0.1328182171414155 ILS(ph)DKS(ph)ESNTK ddPTM_KYSE-520_SHP099_60min_R1 1 ILSDKSESNTK 11 1 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 2 ILS(1)DKS(0.449)ES(0.32)NT(0.231)K 58.071000000000005 0.066493 946690000.0 388820.0 361700.0 310320.0 277680.0 392100.0 343950.0 341590.0 387830.0 402890.0 343040.0 True False 367251.37950654613 344323.3890772316 330323.7237295553 304070.6237124635 422956.0392561769 341803.2804682256 376121.25079713535 386484.70825020206 329735.3320303991 340000.9324810817 1.0801481537906685 1.0127130727689706 0.9715376993795015 0.8943229110978469 1.2439849390110451 1.005301008953098 1.10623593897956 1.136716612598428 0.9698071403046703 1.0 18.3751791775174 -5.729483364180684 24.999987615121192 1.081719914556482 0.9900298463966772 0.19898950615208977 0.0855194791892614 311.2724815107807 243515.02326224503 0.024566909329534075 0.03171287037222128 1.8643035897600444e-06 5.729483364180684 -0.09169006815980474 ILS(ph)DVTHSAVFGVPASK ddPTM_KYSE-520_SHP099_60min_R1 9 ILSDVTHSAVFGVPASK 17 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 ILS(0.999)DVT(0.001)HSAVFGVPASK;ILS(1)DVTHSAVFGVPASK;ILS(0.704)DVT(0.242)HS(0.054)AVFGVPASK;ILS(0.988)DVT(0.011)HS(0.001)AVFGVPASK;ILS(0.866)DVT(0.132)HS(0.002)AVFGVPASK;ILS(0.999)DVT(0.001)HSAVFGVPASK;ILS(0.774)DVT(0.085)HS(0.141)AVFGVPASK;ILS(0.995)DVT(0.003)HS(0.002)AVFGVPASK;ILS(0.993)DVT(0.007)HSAVFGVPASK 289.32 3.8699e-38 31866500000.0 19732225.0 18437030.0 18250102.0 18768288.0 15937095.0 17844328.0 16374523.0 17503356.0 19272790.0 18172474.0 True False 18637639.144034684 17551287.40425377 19426532.77611563 20552020.448628463 17191253.706833504 17732954.929934595 18029819.58478424 17442640.943350013 15773337.163499119 18011480.018330853 1.0347644460680947 0.9744500388858255 1.0785639356868304 1.1410511755675836 0.9544609154460056 0.9845362464321202 1.0010182154067695 0.968417971515838 0.8757379819673949 1.0 24.102413397780975 -5.80988466573718 24.999651271334926 0.9653242064962426 1.0528220607684422 0.444672501744136 0.05090594877939851 120.59760920773857 62232.356944812615 0.016713280104069 0.018951126185517857 1.5492279880453104e-06 5.80988466573718 0.08749785427219958 ILS(ph)LLEGQK ddPTM_KYSE-520_SHP099_60min_R1 1 ILSLLEGQK 9 0 J3QS00;I3L1M4;A0A5K1VW72;J3QRD1;A0A5F9ZI12;A0A5F9ZHI5;A0A5F9ZGX4;A0A5F9ZHN9;P51648;P51648-2 J3QS00 ALDH3A2 Fatty aldehyde dehydrogenase 1 ILS(1)LLEGQK 102.4 0.0029308000000000003 0.0 167690.0 179050.0 137970.0 130320.0 164030.0 173860.0 143670.0 161610.0 219120.0 157550.0 True False 158387.90141827278 170448.1692404709 146863.76695980527 142705.5736178634 176938.22779696665 172774.87524990752 158193.56568407855 161049.41263005752 179333.33156569037 156154.22957204527 1.014304267341007 1.0915373199150573 0.9405045727054506 0.9138758137321089 1.1330991692116301 1.106437371074819 1.0130597558428118 1.031348385960649 1.1484372345031544 1.0 17.25261212096453 -5.770092286554604 24.999994724298954 1.0723995520015828 0.9937648382960627 0.2854079110525021 0.06346110178153078 277.5412428279232 801870.6924044684 0.02056814311029497 0.02368411974721743 1.697882818024696e-06 5.770092286554604 -0.07863471370552011 ILS(ph)PDSFIK ddPTM_KYSE-520_SHP099_60min_R1 5 ILSPDSFIK 9 0 Q8IZT6-2;Q8IZT6 Q8IZT6-2 ASPM Abnormal spindle-like microcephaly-associated protein 1 ILS(0.999)PDS(0.001)FIK;ILS(1)PDSFIK;ILS(1)PDSFIK;ILS(1)PDSFIK;ILS(1)PDSFIK 187.42 5.725e-06 589828000.0 1333916.0 1343215.0 1030579.0 1028699.0 1099203.0 1455469.0 1344505.0 1561907.0 1646871.0 1615739.0 True False 1259921.0203843797 1278684.935193179 1097011.771324701 1126466.2436703672 1185704.0224904546 1446384.878092186 1480420.6865042949 1556489.1091688327 1347840.7406394666 1601424.8094859214 0.7867500321721823 0.7984670448584181 0.6850223406223214 0.7034150070598555 0.7404056784102659 0.9031862560918453 0.9244397100226825 0.9719401747425696 0.8416509677230124 1.0 20.610924631234234 -6.303229433583972 4.047050794480856 0.9296175191202292 0.7395331714568942 0.7784370050842677 0.049611167751679924 0.10808081129469731 3.878695386306191 0.018256037542751628 0.016449617372858553 4.974742047246265e-07 6.303229433583972 -0.19008434766333493 ILS(ph)PSMASK ddPTM_KYSE-520_SHP099_60min_R1 9 ILSPSMASK 9 0 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91;Q8IX09;C9JWI7 A0A494BZT8 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 1 ILS(1)PSMASK;ILS(0.931)PS(0.069)MASK;ILS(0.971)PS(0.029)MASK;ILS(0.993)PS(0.007)MASK;ILS(0.909)PS(0.091)MASK;ILS(0.98)PS(0.02)MASK;ILS(0.993)PS(0.007)MASK;ILS(0.901)PS(0.099)MASK;ILS(0.872)PS(0.121)MAS(0.007)K 184.9 6.4325e-06 8256730000.0 10023270.0 10790300.0 8393060.0 7323500.0 7688600.0 11189070.0 9375720.0 11670330.0 12842560.0 12084640.0 True False 9467259.232206618 10271917.791429508 8934090.076970814 8019523.23810943 8293649.077850134 11119234.863755219 10323509.275809344 11629848.349105494 10510674.838591984 11977579.491307637 0.7904150616639358 0.8575954598242524 0.7459011299782613 0.669544563985516 0.6924311446957206 0.9283373883533534 0.8619027979151644 0.9709681624359497 0.8775291239953603 1.0 23.513833052412355 -6.272888408082179 24.68904656336632 0.921817724685463 0.7522612913666634 0.6767929064044289 0.06093863786374787 425.6190320859356 917815.4220985575 0.023052637908570903 0.020510461497662703 5.334719534362271e-07 6.272888408082179 -0.16955643331879955 ILSDVT(ph)HSAVFGVPASK ddPTM_KYSE-520_SHP099_60min_R1 3 ILSDVTHSAVFGVPASK 17 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 ILS(0.367)DVT(0.465)HS(0.168)AVFGVPASK;ILS(0.046)DVT(0.89)HS(0.064)AVFGVPASK;ILS(0.26)DVT(0.37)HS(0.37)AVFGVPASK 115.58 0.00022803 1615521000.0 1208360.0 1167217.0 1083808.0 1122751.0 1023348.0 1125304.0 1012502.0 1020578.0 1227110.0 1119138.0 True False 1141329.8619940605 1111142.1432915654 1153671.9978341125 1229456.917472602 1103879.6655463658 1118280.5603256752 1114855.5832272628 1017037.8531226951 1004297.7569257685 1109223.307996188 1.0289450769438597 1.001729890889909 1.0400719039326904 1.1083944131084082 0.9951825368153545 1.0081654002978435 1.0050776747932293 0.9168918880364803 0.9054062871614484 1.0 20.081118406336397 -7.0339928630072075 2.2555258738031654 0.9334792451599552 1.0327145550083572 0.5161882313554036 0.03819712535277317 0.24421151826172535 2.4454178465198737 0.0223965265116751 0.011731653070484838 9.24713370121239e-08 7.0339928630072075 0.09923530984840201 ILSQS(ph)TDSLNMR ddPTM_KYSE-520_SHP099_60min_R1 8 ILSQSTDSLNMR 12 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ILS(0.001)QS(0.772)T(0.225)DS(0.002)LNMR;ILSQS(0.838)T(0.162)DSLNMR;ILSQS(0.873)T(0.127)DSLNMR;ILSQS(0.909)T(0.091)DSLNMR;ILSQS(0.989)T(0.011)DSLNMR;ILSQS(0.991)T(0.009)DSLNMR;ILSQS(0.998)T(0.002)DSLNMR;ILSQS(0.834)T(0.166)DSLNMR 348.99 3.9563e-51 36232040000.0 25544200.0 28628600.0 19986900.0 18900850.0 23418200.0 22668000.0 20748700.0 27255700.0 26962500.0 26832300.0 True False 24127212.30489976 27253239.08359531 21275287.554170687 20697181.101252235 25261079.108668692 22526520.603732325 22846181.083797846 27161156.338228185 22066789.669313293 26594586.697213493 0.9072226833074921 1.0247664080619394 0.7999856435595539 0.778247894464208 0.949857931475787 0.8470340547195866 0.8590538121125081 1.0213039460799012 0.8297474189221143 1.0 24.664629280619803 -10.074235560030214 5.12718216733037 1.0000019337403085 0.8921149726054576 0.13911136491443 0.08143540533208136 1.8159082400378703e-06 3.279276942184162e-07 0.0795425678084936 0.019291560582713925 8.428774595396045e-11 10.074235560030214 -0.10788696113485097 ILSQST(ph)DSLNMR ddPTM_KYSE-520_SHP099_60min_R1 1 ILSQSTDSLNMR 12 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 ILSQS(0.31)T(0.69)DSLNMR 151.99 0.00017788 526260000.0 1104300.0 1214100.0 920730.0 854200.0 1057900.0 948900.0 934200.0 1147600.0 1201900.0 1123100.0 True False 1043042.2776325274 1155772.8135987476 980081.7290200862 935382.911175406 1141150.7113723771 942977.5631234177 1028638.0529133867 1143619.2434518535 983665.2574333858 1113150.207758578 0.9370184458149463 1.0382900758074634 0.8804577515136647 0.8403025078339413 1.0251542904260698 0.8471251737195312 0.924078390987894 1.0273718995701644 0.8836770191276152 1.0 20.086216851462087 -10.160448876271788 4.252660927708855 1.0000174564673343 0.9350943162990978 0.07332417817251435 0.07053603238202254 94454598.02901462 1.2570541637426478 16145.700856426993 0.01679870734333815 6.911162805683434e-11 10.160448876271788 -0.06492314016823653 ILTEAEIDAHLVALAERD ddPTM_KYSE-520_SHP099_60min_R1 4 ILTEAEIDAHLVALAERD 18 1 H0YJC4;G3V5Z7;P60900-3;P60900-2;P60900 H0YJC4 PSMA6 Proteasome subunit alpha type;Proteasome subunit alpha type-6 0 ;;; 188.6 4.6331e-12 136452000.0 266142.0 120749.0 121539.0 116960.0 218502.0 113459.0 96477.0 114067.0 148165.0 103533.0 False True 251378.57271907636 114948.03679205598 129373.59840927561 128075.84323469382 235696.86429368303 112750.86029552078 106229.83668478343 113671.32820043781 121261.97093569988 102615.77816745518 2.4497068307454652 1.1201789709617191 1.260757368113072 1.2481106270586502 2.2968871698176607 1.098767288121389 1.0352193257398543 1.1077373307537701 1.181708827835585 1.0 16.646893050740747 -4.256448946066887 24.66247697857912 1.2842368609471608 2.4497074156490126 0.4987590341717968 0.3568046389205033 397.92900348880136 1966467.942232928 0.09268888413265251 0.7440259241888714 5.540526723403822e-05 4.256448946066887 1.1654705547018518 ILTFDQLALDS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 ILTFDQLALDSPK 13 0 J3QQ67;Q07020;F8VUA6;G3V203;H0YHA7;Q07020-2 J3QQ67 RPL18 60S ribosomal protein L18 1 ILTFDQLALDS(1)PK;ILTFDQLALDS(1)PK;ILTFDQLALDS(1)PK;ILTFDQLALDS(1)PK;ILTFDQLALDS(1)PK;ILTFDQLALDS(1)PK;ILTFDQLALDS(1)PK 311.69 8.4966e-40 4517430000.0 2502740.0 2416690.0 2046127.0 1622248.0 1903413.0 2352951.0 1868477.0 2144590.0 2498980.0 2160250.0 True False 2363908.0231115012 2300588.5848743543 2178023.620338953 1776425.962173355 2053200.7741614813 2338265.3600261435 2057360.8897382193 2137150.917841068 2045228.2261593167 2141111.8656490697 1.1040562901158328 1.0744831327049509 1.0172395264731737 0.8296745212958961 0.9589413832607301 1.092079959734989 0.9608843530062539 0.9981500509751269 0.9552178281629923 1.0 21.02992874281551 -4.8376407265167645 3.742184173508542 0.9718578385375071 1.092010046505013 0.36804267983810257 0.06125725943726947 0.24385035186198825 6.614015533093758 0.017309233254927333 0.0418846293718408 1.4533133852189282e-05 4.8376407265167645 0.12015220796750603 ILTFDQLALDSPK ddPTM_KYSE-520_SHP099_60min_R1 2 ILTFDQLALDSPK 13 0 J3QQ67;Q07020;F8VUA6;G3V203;H0YHA7;Q07020-2 J3QQ67 RPL18 60S ribosomal protein L18 0 ; 243.53 4.5525e-12 109000000.0 212274.0 314300.0 275140.0 205151.0 326400.0 304710.0 237950.0 234320.0 319120.0 273310.0 False True 200498.73806227194 299200.5562260822 292875.9646395648 224648.4893591029 352085.8230380417 302808.1918635643 262004.30816820802 233507.19861069927 261175.8523605476 270888.6860319623 0.7401517612242211 1.1045147754556992 1.0811672090469229 0.8293018532807847 1.2997435522150191 1.11783255439408 0.9672028463281557 0.8620042499048766 0.9641445576273767 1.0 18.04734061346791 -6.987560297674246 23.300106305259938 0.9307653388632996 1.038245786535048 0.06307860416483724 0.14970045945100025 246.39029187584003 461496.47409663256 0.0630427956323844 0.04245957981771508 1.0290576423713467e-07 6.987560297674246 0.10748044767174847 ILTVEDHYYEGGIGEAVSSAVVGEPGITVTHLAVNR ddPTM_KYSE-520_SHP099_60min_R1 2 ILTVEDHYYEGGIGEAVSSAVVGEPGITVTHLAVNR 36 0 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 138.42 6.338600000000001e-09 61988000.0 77925.0 82193.0 66837.0 89436.0 73961.0 62166.0 73317.0 71919.0 82165.0 60266.0 False True 73602.34491036375 78244.32490579179 71145.41996298103 97935.97055008607 79781.30991947494 61777.99893469319 80728.59786496536 71669.5297750207 67245.90721109418 59732.09012623854 1.2322077589250877 1.3099210950165858 1.191075346813102 1.639587202508852 1.335652406451275 1.0342514183603957 1.3515113516763357 1.1998496892299169 1.125791966579034 1.0 15.866218584536812 -6.140276934168946 8.783110149956357 1.1681117455507288 1.3492600384349789 0.31647054598669233 0.1439476369708768 0.4534723642350079 30.747897059390862 0.04813949337636185 0.04817170055963182 7.239741602409087e-07 6.140276934168946 0.18114829288425005 ILVGELLTSQPEVDERPCRT(ph)PPLQQS(ph)PSVIR ddPTM_KYSE-520_SHP099_60min_R1 4 ILVGELLTSQPEVDERPCRTPPLQQSPSVIR 31 2 Q6IQ26-2;Q6IQ26;H0YDE6 Q6IQ26-2 DENND5A DENN domain-containing protein 5A 2 ILVGELLTSQPEVDERPCRT(1)PPLQQS(0.949)PS(0.052)VIR;ILVGELLTSQPEVDERPCRT(1)PPLQQS(0.96)PS(0.04)VIR;ILVGELLTSQPEVDERPCRT(1)PPLQQS(0.966)PS(0.034)VIR;ILVGELLTSQPEVDERPCRT(1)PPLQQS(0.978)PS(0.022)VIR 171.1 1.2842999999999998e-09 1694660000.0 711984.0 618990.0 593842.0 571210.0 611641.0 633516.0 484735.0 565728.0 683827.0 554494.0 True False 672488.8282150836 589252.7912770677 632122.0055007953 625497.6266594519 659773.6669387593 629561.9916531724 533736.7443577078 563765.6216099077 559661.2546758467 549581.6145498038 1.2236377826539206 1.0721843229049084 1.1501876859883777 1.138134191719342 1.2005017079751124 1.1455295719251553 0.9711692135023922 1.0258087364726036 1.0183405700976729 1.0 19.0679742161447 -6.751148078961248 24.683281733585 1.005980361652263 1.1523424767788992 0.7754068840728487 0.03984233760247879 82.01376340405615 196707.10814535018 0.015034735685453446 0.011510182877468968 1.7735846485418056e-07 6.751148078961248 0.14636211512663633 ILVSIGES(ph)FGTSEK ddPTM_KYSE-520_SHP099_60min_R1 1 ILVSIGESFGTSEK 14 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 ILVSIGES(0.609)FGT(0.381)S(0.011)EK 185.27 7.004100000000001e-09 0.0 184520.0 179490.0 167190.0 174190.0 166080.0 146210.0 147550.0 174850.0 193060.0 204240.0 True False 174284.30776849942 170867.03098001712 177967.33491345838 190744.9652278668 179149.55113406217 145297.4491561544 162465.7939492294 174243.4861602968 158005.17064655075 202430.59249631554 0.8609583443849851 0.8440771173612363 0.8791523688135111 0.9422734127073139 0.8849924753212531 0.7177642833743076 0.802575302209751 0.8607566870776621 0.780539980138756 1.0 17.627067809466745 IMAT(ph)PEQVGK ddPTM_KYSE-520_SHP099_60min_R1 6 IMATPEQVGK 10 0 B1AHC9;P12956-2;P12956 B1AHC9 XRCC6 X-ray repair cross-complementing protein 6 1 IMAT(1)PEQVGK;IMAT(1)PEQVGK;IMAT(1)PEQVGK;IMAT(1)PEQVGK;IMAT(1)PEQVGK;IMAT(1)PEQVGK 163.51 0.00031560000000000003 4744780000.0 9549400.0 11200700.0 8174570.0 7296450.0 6964780.0 9299100.0 7328800.0 10240500.0 10051700.0 10869600.0 True False 9019675.745743051 10662601.559406536 8701515.86197446 7989902.414242312 7512868.56182258 9241060.867573997 8069666.626195282 10204978.095650662 8226564.662736628 10773303.80042084 0.8372246724714766 0.9897243925294319 0.8076924240857805 0.7416390145732455 0.6973597608496944 0.8577740903596361 0.7490428911769902 0.9472468506134601 0.7636064864721696 1.0 23.360957406718256 -9.252302918202485 11.634768619931311 0.9999999980745989 0.822482680404605 0.2736965400114205 0.08733195419077795 0.0 0.0 0.08757678484992894 0.021240490252249975 5.593673095310322e-10 9.252302918202485 -0.1775173176699939 IMEIVDAITTTAQSHQR ddPTM_KYSE-520_SHP099_60min_R1 1 IMEIVDAITTTAQSHQR 17 0 F8VZI0;A0A2R8Y891;P08237-2;P08237;P08237-3 F8VZI0 PFKM ATP-dependent 6-phosphofructokinase, muscle type 0 94.544 0.0023025 37596000.0 26027.0 26071.0 15577.0 29405.0 23646.0 26706.0 21173.0 25356.0 21588.0 11358.0 False True 24583.23042646181 24818.510026631175 16581.11834408122 32199.642359064364 25506.805672664002 26539.317947912285 23313.373468566835 25268.04595413489 17668.163389193716 11257.376956390288 2.183744092579849 2.204644130046908 1.4729113547778012 2.8603148392207056 2.2657858728080504 2.3575045990484624 2.0709418862742197 2.2445766941997443 1.5694742618673991 1.0 13.458583088597125 -7.972803086085004 2.7273510388903146 1.0024119007620866 2.2102372802318335 0.597524419892453 0.31954190187331083 0.16871310683663143 2.8782963966597026 0.3045516127226343 0.08240766958062234 1.0646256218231625e-08 7.972803086085004 1.2078253794697469 IMEVIDAITTTAQSHQR ddPTM_KYSE-520_SHP099_60min_R1 1 IMEVIDAITTTAQSHQR 17 0 P17858;P17858-2 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type 0 114.59 0.00023523 21736000.0 45459.0 44064.0 27557.0 47609.0 37771.0 45169.0 35929.0 39788.0 27781.0 24129.0 False True 42937.29864973016 41947.09929858755 29333.368312758957 52133.74504583219 40743.36281240769 44887.08351641017 39561.05395324881 39649.984714588994 22736.67070201921 23915.235832077928 1.7953951594379682 1.753990618914289 1.2265556785107505 2.1799385718749336 1.703657162257957 1.876924142901503 1.654219687860442 1.6579382696868818 0.9507190671949015 1.0 14.545642397597137 -7.7347194613075745 5.031689628360311 0.962593287809802 1.7360573974738585 0.6509181413050302 0.2217743628178461 0.10418511341074838 6.567901516528208 0.17364672612859205 0.05587373738111671 1.841961458434815e-08 7.7347194613075745 0.7734641096640564 IMGPNYT(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 2 IMGPNYTPGK 10 0 P13639 P13639 EEF2 Elongation factor 2 1 IMGPNYT(1)PGK;IMGPNYT(1)PGK 194.8 1.133e-05 1819210000.0 2550400.0 2667900.0 1708760.0 1687660.0 1914620.0 2757500.0 1959670.0 2446500.0 2349490.0 2656000.0 True False 2408924.227903648 2539730.079400459 1818909.4037126664 1848054.6989865187 2065289.7013023745 2740289.419657313 2157772.568136134 2438013.662517394 1922881.841823084 2632469.906336733 0.9150813926134621 0.964770793119786 0.6909516417772869 0.7020231055777639 0.7845444676616913 1.0409575482937308 0.8196760627508279 0.9261316365473903 0.7304477962670841 1.0 21.327985608181276 IMGPNYT(ph)PGKK ddPTM_KYSE-520_SHP099_60min_R1 2 IMGPNYTPGKK 11 1 P13639 P13639 EEF2 Elongation factor 2 1 IMGPNYT(1)PGKK;IMGPNYT(1)PGKK 150.22 6.6085e-05 6889700000.0 6067200.0 5541100.0 4218000.0 3753300.0 3518200.0 5384600.0 4286800.0 4841800.0 5072500.0 5127600.0 True False 5730640.3213366605 5274897.238639333 4489899.029038616 4110012.503529211 3795062.324180268 5350992.714084044 4720151.579136265 4825004.925884611 4151461.867319122 5082173.453212432 1.1275963668092308 1.0379215284958607 0.8834604073185578 0.8087115761330972 0.7467400235585067 1.0528945466632376 0.928766328538564 0.9493979239993737 0.8168674102799446 1.0 22.277014184349255 -4.6075481560918785 3.3144495984959463 0.8944488160669419 1.114675952144349 0.4304273329474665 0.08738183989077289 0.22669140736723364 4.754551848659571 0.02388816142020235 0.08313236511130238 2.4686063620178987e-05 4.6075481560918785 0.22022713607740707 IMGPNYT(ph)PGKKEDLYLKPIQR ddPTM_KYSE-520_SHP099_60min_R1 1 IMGPNYTPGKKEDLYLKPIQR 21 3 P13639 P13639 EEF2 Elongation factor 2 1 IMGPNYT(1)PGKKEDLYLKPIQR 121.62 5.5733e-05 926890000.0 1063100.0 1181600.0 1108200.0 865670.0 686910.0 931010.0 589440.0 701620.0 1201500.0 688140.0 True False 1004127.7237626917 1124834.1623822418 1179636.3451826938 947943.0165268244 740965.909016732 925199.2212493757 649026.3475800325 699186.2439793387 983337.887350205 682043.6149648195 1.4722338890519275 1.6492114839903045 1.7295614522299143 1.3898568885154365 1.086390800762722 1.356510347651445 0.9515906803313597 1.025134212297264 1.4417522072997142 1.0 19.37950447333659 -5.539002904632749 3.6981965725762724 1.147104121449961 1.617511880891677 0.6479849382773076 0.1568649279495051 0.1389356790563721 4.1351336327392785 0.04683528594117721 0.06543281469081284 2.8906605490888043e-06 5.539002904632749 0.470407759441716 IMLPENGHPLMDS(ph)TL ddPTM_KYSE-520_SHP099_60min_R1 1 IMLPENGHPLMDSTL 15 0 Q9HBW0 Q9HBW0 LPAR2 Lysophosphatidic acid receptor 2 1 IMLPENGHPLMDS(0.5)T(0.5)L 88.706 0.0024663 19762000.0 47058.0 56760.0 41137.0 57075.0 52721.0 53144.0 51059.0 53447.0 75424.0 48332.0 True False 44447.5989322027 54033.16440150306 43788.75684152717 62499.39083977556 56869.8427585435 52812.30858323415 56220.542007819044 53261.60483162356 61728.90288431282 47903.81608172702 0.9278509014056879 1.1279511492219947 0.9140974649456048 1.304685011589631 1.1871672741378236 1.1024655842267959 1.1736130147106267 1.111844716937703 1.288600949431655 1.0 15.547852967095288 -5.251792305517715 24.999256529006214 1.1700091787566043 1.003764974154245 0.39776168648271293 0.09928885933113256 706.1686875979693 1829948.487707618 0.02554476520223306 0.043538252072036605 5.600253607550991e-06 5.251792305517715 -0.16624420460235934 IMNMIEEIKT(ph)PAS(ph)TPVS(ph)GTPQAS(ph)PMIER ddPTM_KYSE-520_SHP099_60min_R1 1 IMNMIEEIKTPASTPVSGTPQASPMIER 28 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 4 IMNMIEEIKT(0.997)PAS(0.769)T(0.235)PVS(0.5)GT(0.5)PQAS(1)PMIER 81.721 0.0065565 93785000.0 193980.0 189980.0 156030.0 171460.0 164860.0 163490.0 137510.0 165640.0 192000.0 134360.0 True False 183219.54271045706 180853.07563420647 166087.94345682708 187755.50684867115 177833.54407491296 162469.59826646373 151410.85276827193 165065.43350066646 157137.63992612527 133169.6749304981 1.375835322914772 1.3580650078825722 1.2471904248734496 1.4098968623799801 1.3353906898678334 1.2200194853014201 1.13697696451759 1.2395121756271834 1.179980652563252 1.0 17.022906067294123 -7.697394870089413 0.23797780744543 0.9356246130616171 1.4259832752864428 0.7751786840449739 0.05641506582272952 1.172781725216053 0.27923608235811476 0.22681878796643337 0.1814017044111508 2.007266931451954e-08 7.697394870089413 0.4903586622248256 IMNMIEEIKT(ph)PAS(ph)TPVS(ph)GTPQASPMIER ddPTM_KYSE-520_SHP099_60min_R1 1 IMNMIEEIKTPASTPVSGTPQASPMIER 28 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 3 IMNMIEEIKT(0.989)PAS(0.84)T(0.171)PVS(0.577)GT(0.246)PQAS(0.177)PMIER 102.53 0.011862000000000001 132220000.0 85498.0 85815.0 59088.0 75787.0 86889.0 72898.0 63954.0 70756.0 88021.0 54360.0 True False 80755.25550396251 81692.31858905894 62896.90702414271 82989.7736938075 93726.66996921693 72443.01654185995 70419.09445089143 70510.56395057448 72038.60522884101 53878.41269144006 1.4988425135396113 1.516234694160502 1.1673860435412469 1.5403158621076545 1.7395959770750218 1.3445647880671387 1.3070001682154098 1.3086978704140044 1.3370587890442094 1.0 15.717419727827018 -8.260703336273004 0.5513256053642398 0.9916390681679677 1.4718386761258329 0.48036938107842375 0.14247562228290786 1.2081314246020929 0.7858898931027678 0.18602734681914013 0.07401628160068453 5.486516172850355e-09 8.260703336273004 0.4801996079578652 IMNMIEEIKT(ph)PAS(ph)TPVSGT(ph)PQAS(ph)PMIER ddPTM_KYSE-520_SHP099_60min_R1 2 IMNMIEEIKTPASTPVSGTPQASPMIER 28 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 4 IMNMIEEIKT(0.972)PAS(0.786)T(0.241)PVS(0.22)GT(0.78)PQAS(1)PMIER;IMNMIEEIKT(0.999)PAS(0.5)T(0.5)PVS(0.208)GT(0.794)PQAS(1)PMIER 128.14 8.769799999999999e-05 416402000.0 492249.0 462463.0 363185.0 415556.0 367807.0 403625.0 343946.0 400246.0 466952.0 358983.0 True False 464942.96669594606 440245.58330888517 386596.4862165464 455050.3172985332 396751.3183644391 401105.8266579081 378715.4182694789 398857.6400441187 382165.28770200006 355802.6899045477 1.3067438214721698 1.2373306773678165 1.0865473960308165 1.2789400704660523 1.1150880238451173 1.1273265718297802 1.0643972882022843 1.1210079388413883 1.0740933066147553 1.0 18.440717892004454 -1.0000000000005351 0.15834224388864518 0.987698997128296 2.1174821659695118 0.6644733348719305 0.05502126612642268 39.938259731297414 0.4098792943788221 0.16785209716657734 10.499752365075981 0.09999999999987678 1.0000000000005351 1.1297831688412159 IMNMIEEIKT(ph)PAS(ph)TPVSGTPQAS(ph)PMIER ddPTM_KYSE-520_SHP099_60min_R1 4 IMNMIEEIKTPASTPVSGTPQASPMIER 28 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 3 IMNMIEEIKT(1)PAS(0.8)T(0.2)PVS(0.01)GT(0.024)PQAS(0.966)PMIER;IMNMIEEIKT(1)PAS(0.863)T(0.137)PVS(0.141)GT(0.078)PQAS(0.781)PMIER;IMNMIEEIKT(0.999)PAS(0.813)T(0.188)PVS(0.008)GT(0.026)PQAS(0.967)PMIER;IMNMIEEIKT(1)PAS(0.74)T(0.26)PVS(0.261)GT(0.088)PQAS(0.651)PMIER 122.91 0.0012052 253799000.0 331064.0 306641.0 224021.0 276748.0 278719.0 270930.0 234074.0 258376.0 319399.0 230154.0 True False 312699.2199602779 291909.5060824754 238461.75210627314 303050.04671267973 300652.5996058212 269239.0253736194 257736.4842620934 257479.75396141154 261404.19299356535 228115.01461710272 1.3707963085426538 1.2796593269954348 1.0453575469661114 1.328496711281182 1.3179868940695323 1.1802775272182082 1.1298532220455157 1.1287277796842892 1.145931553134893 1.0 17.799401882948917 -8.136961399324269 0.03296249460208268 1.8457345513387383e-08 2.2428400068231493 0.49444727060539606 0.08492018660524284 142.1899582428395 2.734256508577696 97.28632828083248 87.41265010011487 7.295223482973341e-09 8.136961399324269 2.242839988365804 IMNMIEEIKT(ph)PAS(ph)TPVSGTPQASPMIER ddPTM_KYSE-520_SHP099_60min_R1 1 IMNMIEEIKTPASTPVSGTPQASPMIER 28 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 2 IMNMIEEIKT(0.997)PAS(0.503)T(0.446)PVS(0.033)GT(0.02)PQAS(0.001)PMIER 77.464 0.013293000000000001 85747000.0 103280.0 98172.0 90294.0 77416.0 83944.0 69913.0 59332.0 65891.0 101450.0 79564.0 True False 97550.85251642429 93455.66976082369 96114.49571550805 84773.5933640309 90549.91522397476 69476.64703408946 65329.85758451831 65662.43950007504 83029.2373463823 78859.12485985529 1.2370268207995847 1.1850964606430605 1.2188126090204296 1.0750004329199254 1.148249050251265 0.8810222933307981 0.828437516909038 0.8326549351995374 1.052880532138011 1.0 16.266990079757385 -6.223616099002124 5.134546629736653 0.902393924838858 1.1730374869817686 0.7293603761269 0.07702741397452956 0.10390762611039925 7.133304065061251 0.026718467587275047 0.026119918951169146 5.97563278039252e-07 6.223616099002124 0.2706435621429105 IMNMIEEIKT(ph)PAST(ph)PVS(ph)GTPQAS(ph)PMIER ddPTM_KYSE-520_SHP099_60min_R1 1 IMNMIEEIKTPASTPVSGTPQASPMIER 28 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 4 IMNMIEEIKT(0.97)PAS(0.489)T(0.54)PVS(0.532)GT(0.494)PQAS(0.974)PMIER 50.479 0.06681799999999999 35602000.0 48930.0 44585.0 34051.0 47833.0 39815.0 42764.0 34804.0 40365.0 50120.0 36593.0 True False 46215.755360463234 42443.06967655063 36245.981943526305 52379.03393848418 42948.213983638576 42497.09401349964 38322.3279743069 40224.98323626184 41019.47142238231 36268.81448892321 1.2742560244029453 1.1702359251227548 0.999370463421023 1.4441893035814874 1.1841637116855668 1.171725478550687 1.0566192613218952 1.1090790753181876 1.1309846213724462 1.0 15.146441968560325 -6.587030228636542 3.362961764657694 1.0833593805658512 1.2111314051035043 0.2713509118462666 0.10791185008149566 0.3833785574175141 8.814949869366485 0.044510228926039154 0.0340564470065981 2.5880327714303765e-07 6.587030228636542 0.12777202453765302 IMNMIEEIKT(ph)PAST(ph)PVSGT(ph)PQAS(ph)PMIER ddPTM_KYSE-520_SHP099_60min_R1 1 IMNMIEEIKTPASTPVSGTPQASPMIER 28 1 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 4 IMNMIEEIKT(0.996)PAS(0.232)T(0.772)PVS(0.229)GT(0.771)PQAS(1)PMIER 115.41 0.00021463 186440000.0 392110.0 333360.0 286990.0 309680.0 317180.0 342070.0 268130.0 325140.0 374300.0 301480.0 True False 370358.87664809416 317344.8852164383 305489.8346002355 339111.8940913129 342140.2614926657 339935.01424557663 295235.19709662406 324012.1652282468 306336.5553351494 298809.1217478905 1.239449701139215 1.062032120572901 1.022357794210786 1.134877985342852 1.1450127743467426 1.1376326541074762 0.9880394392568719 1.0843449601971005 1.0251914451045772 1.0 18.18886466439655 -6.7517673266641856 24.999999549970642 1.0314227046991546 1.117653178447533 0.4043871019477072 0.05844897363347635 241.48176007621709 624175.1744684518 0.0231134803956642 0.017677242228266294 1.7710575485464608e-07 6.7517673266641856 0.08623047374837833 IMNTFSVVPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 IMNTFSVVPSPK 12 0 P04350;M0R2D3;M0QYM7;M0R042;A0A0B4J269;Q13509;Q13509-2;G3V2A3;Q5JP53;P07437;Q5ST81;P68371 P04350;A0A0B4J269;Q5JP53;P68371 TUBB4A;TUBB3;TUBB;TUBB4B Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-4B chain 1 IMNTFS(0.001)VVPS(0.999)PK;IMNTFS(0.001)VVPS(0.999)PK 120.7 0.00012378 1152020000.0 1687860.0 1906950.0 1301290.0 1207630.0 1442090.0 1897230.0 1441700.0 1649440.0 2054110.0 1728420.0 True False 1594231.0411345079 1815337.2596096955 1385173.235537618 1322402.7921128 1555574.2786302993 1885388.6838282654 1587441.1056360833 1643718.4776221889 1681135.403899235 1713107.5434904138 0.9306076826247008 1.0596750136952822 0.8085734259948223 0.7719321516840895 0.9080423961363544 1.1005664477939505 0.9266441629237775 0.9594952073313234 0.9813367586216821 1.0 20.708184291435057 -6.027981201779619 24.414600251354063 0.9888264552783452 0.8912867289421259 0.2597836220549522 0.08269309923529748 855.3246539721503 746299.7312837815 0.029416581276779888 0.029489507725620694 9.376025897087627e-07 6.027981201779619 -0.09753972633621932 IMPDSNDS(ph)PPAEREPGEVVDSLVGK ddPTM_KYSE-520_SHP099_60min_R1 7 IMPDSNDSPPAEREPGEVVDSLVGK 25 1 Q9Y657 Q9Y657 SPIN1 Spindlin-1 1 IMPDS(0.089)NDS(0.911)PPAEREPGEVVDSLVGK;IMPDS(0.011)NDS(0.989)PPAEREPGEVVDSLVGK;IMPDSNDS(1)PPAEREPGEVVDSLVGK;IMPDSNDS(1)PPAEREPGEVVDSLVGK;IMPDSNDS(1)PPAEREPGEVVDSLVGK;IMPDS(0.001)NDS(0.999)PPAEREPGEVVDSLVGK;IMPDS(0.006)NDS(0.994)PPAEREPGEVVDSLVGK 252.29 2.2034e-29 3493720000.0 2580100.0 2446980.0 2082710.0 1747820.0 1853820.0 2394390.0 1851540.0 2281950.0 2822120.0 2294980.0 True False 2436976.709698161 2329423.40780814 2216964.8190538203 1913932.2872987562 1999705.0872070517 2379445.7238561288 2038711.732489029 2274034.448061134 2309694.1478558187 2274648.26266742 1.0713641971354213 1.0240807099891949 0.9746407193761221 0.8414190091325762 0.8791271688142458 1.046071941279315 0.8962755982757025 0.9997301496603409 1.015407166797429 1.0 21.117212042574934 -9.77129163499715 16.970881664695163 0.9999999999994663 0.9678145621683288 0.01033728170382564 0.07232011736874601 0.0 0.0 0.07408160311795067 0.017967427915905724 1.693200410150612e-10 9.77129163499715 -0.032185437831137476 IMQLS(ph)LER ddPTM_KYSE-520_SHP099_60min_R1 6 IMQLSLER 8 0 Q8IY63;Q8IY63-2 Q8IY63 AMOTL1 Angiomotin-like protein 1 1 IMQLS(1)LER;IMQLS(1)LER;IMQLS(1)LER;IMQLS(1)LER;IMQLS(1)LER;IMQLS(1)LER 128.03 0.00083805 984310000.0 1240150.0 939103.0 873088.0 711550.0 799351.0 837507.0 723330.0 724897.0 963108.0 825037.0 True False 1171356.407322265 893987.0822576584 929368.6494701919 779175.4980646914 862255.3760149557 832279.8081555513 796451.2554205094 722382.5014992314 788231.8651769306 817727.8140490724 1.4324526904889785 1.0932575202878076 1.1365256672245465 0.9528543418457484 1.054452791259967 1.0177956452703045 0.9739808793793991 0.8834021407713554 0.9639293804547392 1.0 19.641261187203344 -1.000000000277258 0.6461194508647342 0.9670875223068085 39.85015746004158 0.8600060886669825 0.054163317568916916 74.34597016926043 0.4870205008760475 0.022850065513917776 4130.859779332297 0.09999999993615899 1.000000000277258 38.883069937734774 IMS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 4 IMSPEK 6 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 IMS(1)PEK;IMS(1)PEK;IMS(1)PEK;IMS(1)PEK 101.43 0.01172 6215700000.0 13214300.0 12190500.0 11250300.0 10618800.0 10811100.0 11680100.0 11013300.0 12284700.0 14344900.0 12369000.0 True False 12481276.436946033 11604850.08168646 11975512.339116454 11628007.559341362 11661872.063255437 11607200.163386898 12126631.843449997 12242087.24297052 11740227.765501423 12259420.282936376 1.0180967899696247 0.9466067574042634 0.9768416501541197 0.948495711132943 0.9512580361966501 0.9467984533936495 0.989168456874653 0.9985861452200981 0.9576495049967734 1.0 23.54738742344357 -6.784239684636839 24.985517571575965 0.9862332167681769 0.9630679227839282 0.174039551363676 0.02296332796685218 405.6533035890448 444527.2618203551 0.009362753408062125 0.00631738964515457 1.643464454261468e-07 6.784239684636839 -0.023165293984248714 IMS(ph)PMR ddPTM_KYSE-520_SHP099_60min_R1 3 IMSPMR 6 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 IMS(1)PMR;IMS(1)PMR;IMS(1)PMR 90.37 0.015777 574680000.0 863280.0 799390.0 815120.0 642890.0 711210.0 775150.0 776410.0 876250.0 939330.0 883830.0 True False 815392.1374939856 760986.1044911478 867663.9394381117 703990.0723080734 767178.1807686446 770312.0013227072 854897.0998313864 873210.4932682872 768771.3505823292 875999.9538093357 0.9308129914256347 0.8687056445402267 0.9904840013575636 0.8036416774301556 0.8757742251383993 0.8793516460508491 0.9759099827731926 0.9968156841459656 0.87759291223622 1.0 19.740571268191292 -6.760125986033816 24.999879171802235 0.9623142924743424 0.8902234539614847 0.2881829705696889 0.05473499971749671 46.26444237980186 880651.0642901128 0.021387122501533087 0.015645752254670336 1.7372967770291164e-07 6.760125986033816 -0.07209083851285769 IMS(ph)SPLSK ddPTM_KYSE-520_SHP099_60min_R1 1 IMSSPLSK 8 0 P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;E5RHH1;J3KSS0 P61254 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 1 IMS(0.638)S(0.362)PLSK 68.657 0.024628 147960000.0 495610.0 500060.0 422640.0 359720.0 394190.0 446620.0 404440.0 421340.0 502920.0 488950.0 True False 468117.52532595943 476036.3669946377 449884.05064790975 393907.6806462387 425210.51036570396 443832.4789147227 445324.74215402495 419878.46988149575 411602.4055814944 484618.283397344 0.9659510203459339 0.9822913895395278 0.9283266151125478 0.812820510783885 0.8774132651059495 0.9158393195636398 0.9189185744956679 0.8664107076976142 0.8493332168485623 1.0 18.886489309414056 -4.993605511378019 6.8800478369716656 0.8862211606111279 0.9702262136195268 0.3239806414668266 0.04720507288492391 0.1429634019304451 36.93024874464638 0.01225059079714001 0.024436791165516707 1.0148327840852962e-05 4.993605511378019 0.08400505300839889 IMSS(ph)IGEGIDFSQER ddPTM_KYSE-520_SHP099_60min_R1 6 IMSSIGEGIDFSQER 15 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 IMS(0.03)S(0.97)IGEGIDFSQER;IMS(0.053)S(0.947)IGEGIDFSQER;IMS(0.018)S(0.982)IGEGIDFSQER;IMS(0.002)S(0.998)IGEGIDFSQER;IMS(0.004)S(0.996)IGEGIDFSQER;IMS(0.025)S(0.975)IGEGIDFSQER 339.61 2.4196999999999995e-54 1539961000.0 2151170.0 2188850.0 2059480.0 1874370.0 2002300.0 1998150.0 1802320.0 2275120.0 2654700.0 2402340.0 True False 2031840.3118489191 2083694.3604691664 2192237.376084509 2052509.5612501097 2159869.6184714157 1985678.8046738892 1984516.094548118 2267228.1397370016 2172673.3995410665 2381057.1365922405 0.8533353864648879 0.8751131287220354 0.9206991896137487 0.862016089285305 0.9071053295103252 0.8339484064274849 0.833460089659314 0.9521939246623243 0.9124826809702635 1.0 21.183170809709512 -7.902833983662428 1.2883741784177223 0.9946499861647341 0.8732103338078059 0.570535102756355 0.03350719871062575 0.31490164355541495 1.1592174215597975 0.03203272060658737 0.009968303555868967 1.2507370540269476e-08 7.902833983662428 -0.12143965235692822 IMVGS(ph)TDDPSVFSLPDSK ddPTM_KYSE-520_SHP099_60min_R1 4 IMVGSTDDPSVFSLPDSK 18 0 O43741 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 IMVGS(0.882)T(0.118)DDPSVFSLPDSK;IMVGS(0.977)T(0.023)DDPSVFSLPDSK;IMVGS(0.966)T(0.034)DDPSVFSLPDSK;IMVGS(0.985)T(0.015)DDPSVFSLPDSK 312.66 1.3625e-47 763840000.0 1638320.0 1384600.0 1130350.0 1122737.0 1200074.0 1376690.0 1208429.0 1365630.0 1602630.0 1295601.0 True False 1547439.123690051 1318081.7376730302 1203214.169623945 1229441.5869168122 1294512.996312973 1368097.5670527741 1330588.7964505148 1360892.9482704387 1311632.7910146168 1284122.9831023251 1.2050552354039936 1.026445095226521 0.9369929402844953 0.9574173214676 1.0080911356212523 1.0653945027504874 1.0361848623220904 1.059783966316563 1.021423032119424 1.0 20.292351948276046 -6.231378906386749 24.165590995043843 1.0402705152730327 1.017936699057544 0.0 0.06957211154296881 2641.4356064467297 2123447.6022989387 0.02422294295324045 0.024215377244621483 5.869770126347311e-07 6.231378906386749 -0.02233381621548869 IMVGST(ph)DDPSVFSLPDSK ddPTM_KYSE-520_SHP099_60min_R1 1 IMVGSTDDPSVFSLPDSK 18 0 O43741 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 IMVGS(0.191)T(0.809)DDPSVFSLPDSK 364.38 1.3300999999999996e-71 744300000.0 1085300.0 904420.0 806360.0 811800.0 833110.0 929400.0 819550.0 976610.0 1145000.0 944500.0 True False 1025096.245508088 860970.305637904 858339.2558216171 888953.2279234299 898671.0172525219 923599.269856574 902398.112037215 973222.3678524884 937096.8631011111 936132.4648098815 1.0950333249218893 0.9197099107258905 0.9168993578231864 0.9496019648287348 0.9599827492736643 0.9866117291895727 0.9639641246930608 1.039620357627635 1.0010301942593407 1.0 19.83635316322272 -7.243182852256301 23.474205119162793 1.015243953676581 0.9657005776730626 0.1412947599496831 0.04794207920312188 619.5512738832799 796619.9424776812 0.02253804219070097 0.012975350972301685 5.712380760213764e-08 7.243182852256301 -0.049543376003518325 INEKPQVIADYESGR ddPTM_KYSE-520_SHP099_60min_R1 1 INEKPQVIADYESGR 15 1 O60869-2;O60869-3;O60869 O60869-2 EDF1 Endothelial differentiation-related factor 1 0 101.15 0.0049217 0.0 261350.0 255750.0 154160.0 190870.0 241240.0 236240.0 188670.0 230130.0 222620.0 216140.0 False True 246852.3945116914 243463.38611142372 164097.40026472107 209010.22741284195 260224.2155321605 234765.53853122174 207742.60484175617 229331.732742746 182197.81979351057 214225.16775437543 1.1523034249398998 1.1364835825012494 0.766004302785145 0.975656733537897 1.2147228930193967 1.0958821551742106 0.9697394896193897 1.0705172279556403 0.8504968006486217 1.0 17.708768456212567 -4.5650448056564645 24.999969103642606 1.0019354734082067 1.1483520102161666 0.20637228430379972 0.11796254670170994 207.72108961652117 123155.68790856047 0.03147269456301383 0.08326911823090256 2.7224204246408512e-05 4.5650448056564645 0.14641653680795996 INENEKS(ph)PSQNR ddPTM_KYSE-520_SHP099_60min_R1 4 INENEKSPSQNR 12 1 K7EQT1;Q9UM11-2;Q9UM11;Q9UM11-3 K7EQT1 FZR1 Fizzy-related protein homolog 1 INENEKS(0.909)PS(0.091)QNR;INENEKS(0.919)PS(0.081)QNR;INENEKS(0.5)PS(0.5)QNR;INENEKS(0.994)PS(0.006)QNR 218.79 1.264e-10 954340000.0 1258830.0 1138940.0 1063130.0 1073490.0 1060340.0 1136290.0 992490.0 1100090.0 1257140.0 999170.0 True False 1189000.1904846088 1084223.6128162078 1131661.0608681433 1175514.1668434627 1143782.7254906783 1129197.9926246253 1092820.5749689639 1096274.0445529372 1028875.0659204632 990318.1311424972 1.2006244792397154 1.0948235508577178 1.1427247722533198 1.1870066091664009 1.1549649446194974 1.140237623764302 1.1035045614162522 1.1069917939280807 1.0389338875715464 1.0 19.91753252740105 -7.66334675994941 0.8942528244688513 0.9987632178204037 1.153460329031823 0.7747996667767373 0.028112782940397932 0.25722561401421595 0.42157817416010707 0.026533657908386677 0.009892025789367724 2.1709670903914708e-08 7.66334675994941 0.15469711121141938 INENEKS(ph)PSQNRK ddPTM_KYSE-520_SHP099_60min_R1 3 INENEKSPSQNRK 13 2 K7EQT1;Q9UM11-2;Q9UM11;Q9UM11-3 K7EQT1 FZR1 Fizzy-related protein homolog 1 INENEKS(0.5)PS(0.5)QNRK;INENEKS(0.814)PS(0.186)QNRK;INENEKS(0.976)PS(0.024)QNRK 88.992 0.0017961 1902750000.0 2942370.0 2515490.0 2395480.0 2134510.0 2511271.0 2094510.0 1880843.0 2065273.0 2917610.0 2167934.0 True False 2779150.8706308207 2394642.08457253 2549896.4737035176 2337373.188636166 2708893.7405225663 2081437.3861709654 2070976.9656987493 2058109.0500013416 2387845.5709628263 2148727.791387128 1.2933936451935208 1.1144464618417997 1.1867005601753826 1.0877939951282785 1.260696562580325 0.9686836064177664 0.9638154139393402 0.9578267932545859 1.111283421070909 1.0 21.03505129783671 -6.272236701651289 24.987722618920177 0.9954043607840928 1.1787797058345952 0.6428687199041456 0.06992828664869512 462.77389906858144 1070972.005607876 0.02370918714043751 0.021122253538586475 5.34273087468692e-07 6.272236701651289 0.18337534505050246 INFDKYHPGYFGK ddPTM_KYSE-520_SHP099_60min_R1 2 INFDKYHPGYFGK 13 1 P46776;E9PLL6 P46776 RPL27A 60S ribosomal protein L27a 0 ; 83.499 0.0053095 489650000.0 1077740.0 1273800.0 1146150.0 921270.0 1163620.0 990530.0 704720.0 701880.0 1132780.0 674660.0 False True 1017955.6137785746 1212604.7359872188 1220032.6629048397 1008827.2238100747 1255190.2739078617 984347.7348515516 775959.975004411 699445.3421000243 927095.7070599798 668683.0372775377 1.522329051329099 1.8134223068139916 1.8245305995379446 1.508677755483963 1.8771079927766934 1.4720692465285266 1.1604301765506693 1.0460043146117952 1.3864501645421394 1.0 19.35096299485722 -6.597274179606374 3.275303497623582 1.1506831928246193 1.709900345781672 0.7595669217348999 0.1484281207365395 0.1156581242927555 2.5030527216269007 0.05821954111827796 0.044232423398236305 2.527701699235705e-07 6.597274179606374 0.5592171529570527 INFS(ph)DLDQR ddPTM_KYSE-520_SHP099_60min_R1 6 INFSDLDQR 9 0 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154;E9PGW9;E7EV93;E5RGQ4;Q15154-3 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 1 INFS(1)DLDQR;INFS(1)DLDQR;INFS(1)DLDQR;INFS(1)DLDQR;INFS(1)DLDQR;INFS(1)DLDQR 156.0 0.00019145 1800420000.0 3404170.0 3121200.0 3025370.0 2630620.0 2879550.0 2752880.0 2507480.0 2634980.0 3212300.0 2560220.0 True False 3215333.904055346 2971252.8669832856 3220390.190963149 2880633.333875259 3106154.202601692 2735698.2547910106 2760960.549046519 2625839.8693889575 2629027.295493188 2537538.4426210215 1.267107465270252 1.1709193512411504 1.2691000604652163 1.1352077609905507 1.2240816337715648 1.0780913537472598 1.088046786867483 1.0347980646459605 1.0360541741301337 1.0 21.27499824799976 -6.482508054713929 0.6854230887275431 1.005564849921382 1.2353630527383541 0.8142683720498094 0.04041504531272012 0.28477855471059454 0.281994489011503 0.030134592365744287 0.02509157575226802 3.2922434726336115e-07 6.482508054713929 0.22979820281697205 INHEGEVNR ddPTM_KYSE-520_SHP099_60min_R1 3 INHEGEVNR 9 0 E9PC52;Q16576;Q16576-2;Q5JP01;Q09028-4;Q09028-3;Q09028-2;Q09028 E9PC52;Q09028-4 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 0 ;; 112.36 0.0015356 2077500000.0 697736.0 767056.0 462338.0 405111.0 748230.0 712838.0 481592.0 638211.0 603604.0 612208.0 False True 659031.1931777681 730205.4783854705 492141.0472469547 443612.6276389369 807111.4441536581 708388.9136281704 530276.019244983 635997.1950005676 494004.7292185882 606784.3134106173 1.0861045327185228 1.2034020363531264 0.8110642222781355 0.7310878311034049 1.330145533290142 1.1674476382661465 0.8739118786120293 1.0481437653286558 0.8141356299108709 1.0 19.210824263948528 -6.780450490847215 24.997256866638132 0.9380598201042907 1.0483389053575676 0.10029173532482494 0.17647874718947726 745.3137571920095 979986.2535457341 0.0792272204100646 0.05351155007270744 1.657866321241032e-07 6.780450490847215 0.1102790852532769 INHLEYEDQYKDDNFGEGNDGGILDDK ddPTM_KYSE-520_SHP099_60min_R1 1 INHLEYEDQYKDDNFGEGNDGGILDDK 27 1 O60216 O60216 RAD21 Double-strand-break repair protein rad21 homolog 0 161.49 5.2761e-10 571320000.0 254860.0 215720.0 144870.0 146570.0 188680.0 222470.0 167330.0 191870.0 174210.0 195780.0 False True 240722.40774918554 205356.48739767857 154208.55200019557 160499.9687321226 203528.04255765222 221081.48220894378 184245.3493834265 191204.44775279443 142577.85547672032 194045.54151453535 1.2405459350951065 1.0582901611387756 0.7947028867377728 0.8271252587377795 1.0488673997305245 1.1393278118290766 0.9494954016741749 0.985358623859296 0.7347649132461013 1.0 17.566035759872648 -4.424072458165287 3.771065219075198 0.9415386533259145 1.232619206213209 0.3947182465516851 0.11625820813919219 0.2651716842048461 6.318210756471581 0.031427089362003655 0.15580226451189366 3.766409545536689e-05 4.424072458165287 0.2910805528872946 INHTVILDDPFDDPPDLLIPDRS(ph)PEPTR ddPTM_KYSE-520_SHP099_60min_R1 16 INHTVILDDPFDDPPDLLIPDRSPEPTR 28 1 Q8WUA2 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 1 INHTVILDDPFDDPPDLLIPDRS(0.904)PEPT(0.096)R;INHTVILDDPFDDPPDLLIPDRS(0.984)PEPT(0.016)R;INHTVILDDPFDDPPDLLIPDRS(0.994)PEPT(0.006)R;INHTVILDDPFDDPPDLLIPDRS(0.999)PEPT(0.001)R;INHTVILDDPFDDPPDLLIPDRS(0.996)PEPT(0.004)R;INHTVILDDPFDDPPDLLIPDRS(1)PEPTR;INHTVILDDPFDDPPDLLIPDRS(0.999)PEPT(0.001)R;INHTVILDDPFDDPPDLLIPDRS(0.939)PEPT(0.061)R;INHTVILDDPFDDPPDLLIPDRS(1)PEPTR;INHTVILDDPFDDPPDLLIPDRS(0.947)PEPT(0.053)R;INHTVILDDPFDDPPDLLIPDRS(1)PEPTR;INHTVILDDPFDDPPDLLIPDRS(1)PEPTR;INHTVILDDPFDDPPDLLIPDRS(0.826)PEPT(0.174)R;INHTVILDDPFDDPPDLLIPDRS(0.999)PEPT(0.001)R;INHTVILDDPFDDPPDLLIPDRS(1)PEPTR;INHTVILDDPFDDPPDLLIPDRS(0.986)PEPT(0.014)R 310.6 1.1413999999999997e-64 161284800000.0 8817003.0 8594079.0 8230141.0 7322412.0 7741308.0 8653142.0 6980071.0 8055814.0 10054027.0 8089175.0 True False 8327906.267330281 8181206.54486442 8760669.057551192 8018331.834916561 8350504.897582655 8599134.531057945 7685684.695608209 8027870.261475113 8228469.138195533 8017511.202782909 1.0387146405781924 1.0204172264860312 1.0926918386481743 1.0001023549718728 1.0415332995960345 1.0725441241757356 0.9586122801974356 1.001292054158728 1.0263121472582912 1.0 22.9347230338549 -6.7547956887356975 24.999692111122723 0.9966617907056784 1.0433070503601263 0.404162663257978 0.02840420533927667 165.63371005218977 623269.8098792379 0.01092779714010348 0.008264768667252839 1.7587508132613014e-07 6.7547956887356975 0.04664525965444788 INHTVILDDPFDDPPDLLIPDRS(ph)PEPTREQLDSGR ddPTM_KYSE-520_SHP099_60min_R1 3 INHTVILDDPFDDPPDLLIPDRSPEPTREQLDSGR 35 2 Q8WUA2 Q8WUA2 PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4 1 INHTVILDDPFDDPPDLLIPDRS(0.986)PEPT(0.013)REQLDS(0.001)GR;INHTVILDDPFDDPPDLLIPDRS(0.99)PEPT(0.009)REQLDS(0.001)GR;INHTVILDDPFDDPPDLLIPDRS(0.979)PEPT(0.018)REQLDS(0.003)GR 201.49 4.5871e-16 587560000.0 54895.0 78729.0 79316.0 32675.3 43846.0 35414.4 24077.2 22175.3 91405.0 26933.3 True False 51849.86491953051 74946.74066536178 84428.836270087 35780.750687812826 47296.43075038597 35193.36559329532 26511.158346827433 22098.37906005394 74808.1561325389 26694.691915790325 1.9423286503209467 2.8075521868461655 3.16275747015256 1.3403694937062733 1.7717541337275893 1.3183656775030206 0.9931247167211422 0.8278192207561086 2.802360722818034 1.0 14.704265278462858 -5.274185091714022 24.696322170242954 1.4196851692709596 2.6545467045024664 0.4603241040259448 0.5957885019335822 541.7592432802963 1049721.3061167507 0.1659403156099142 0.24799957162210567 5.318815286741003e-06 5.274185091714022 1.2348615352315069 INLCIHS(ph)EEEDMNLGLVR ddPTM_KYSE-520_SHP099_60min_R1 5 INLCIHSEEEDMNLGLVR 18 0 P41002 P41002 CCNF Cyclin-F 1 INLCIHS(1)EEEDMNLGLVR;INLCIHS(1)EEEDMNLGLVR;INLCIHS(1)EEEDMNLGLVR;INLCIHS(1)EEEDMNLGLVR;INLCIHS(1)EEEDMNLGLVR 299.3 1.8877e-38 648170000.0 600594.0 696082.0 603820.0 593031.0 611620.0 635575.0 563698.0 600152.0 726968.0 608416.0 True False 567277.853565544 662641.1758796163 642743.203346159 649392.4879387289 659751.0143582317 631608.1406704241 620682.0950023228 598070.2127885304 594968.936571955 603025.9075804855 0.9407188753160325 1.0988602107301235 1.0658633323484075 1.0768898645570297 1.0940674456348713 1.0473980184443796 1.0292793181849833 0.9917819537607617 0.9866390964181666 1.0 19.201860459870588 -7.010828635179581 2.205235513326296 0.9911726697758897 1.059815918497627 0.29619194749190125 0.04173393545855985 0.374769487472535 3.605486441551101 0.02337776643873749 0.012417067677914536 9.753744270680512e-08 7.010828635179581 0.06864324872173733 INNFS(ph)ADIK ddPTM_KYSE-520_SHP099_60min_R1 1 INNFSADIK 9 0 P13797;A0A0A0MSQ0;P13797-3;P13797-2 P13797 PLS3 Plastin-3 1 INNFS(1)ADIK 94.68799999999999 0.0033894 257140000.0 384750.0 393240.0 306380.0 331970.0 374170.0 314200.0 330760.0 414540.0 372520.0 349950.0 True False 363407.1505198904 374348.1601347258 326129.74502533214 363520.3289895804 403615.0502639217 312238.9612534277 364196.4487065207 413102.05749436346 304879.75846500066 346849.7152569805 1.0477366263675394 1.0792805750391685 0.9402623980351347 1.0480629304257858 1.1636597422745 0.9002139760215466 1.0500122464759356 1.191011666791471 0.8789967096819314 1.0 18.403951174652345 -7.795983402398826 24.99988331463245 0.9394984379641786 1.0480739677943731 0.2115913576729922 0.0869343999773784 338.6700472566607 245091.07085515576 0.08208325758817153 0.02119775251256385 1.599619160714292e-08 7.795983402398826 0.10857552983019447 INPPSSGGTSS(ph)SPIK ddPTM_KYSE-520_SHP099_60min_R1 1 INPPSSGGTSSSPIK 15 0 P14859-6;P14859-2;P14859;P14859-3;P14859-5;P14859-4;A0A0C4DG88;A0A0A0MT46 P14859-6 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 INPPS(0.014)S(0.014)GGT(0.072)S(0.093)S(0.403)S(0.403)PIK 92.265 0.0020804 3871100000.0 2099000.0 2423300.0 1621200.0 1656300.0 1500000.0 2141300.0 1389600.0 2070300.0 2437800.0 2289600.0 True False 1982564.285747235 2306881.0305525423 1725705.1460117155 1813714.2540152464 1618041.4661674728 2127935.352425096 1530074.3291890845 2063118.6125116528 1995156.9719370212 2269315.925281848 0.873639612563421 1.0165534929941624 0.7604516968246208 0.7992339161811435 0.7130084657412841 0.9376990346378535 0.6742447413967053 0.9091367973612641 0.8791887236631558 1.0 21.113826038673658 -8.064069132891403 1.6647118428748335 0.9973454613894693 0.8299056658860741 0.20874867562532362 0.09852967887086518 0.7219043175025611 4.426330285514081 0.09448722625763666 0.02722575884043837 8.628411860078929e-09 8.064069132891403 -0.16743979550339527 INPPSSGGTSSS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 8 INPPSSGGTSSSPIK 15 0 P14859-6;P14859-2;P14859;P14859-3;P14859-5;P14859-4;A0A0C4DG88;A0A0A0MT46 P14859-6 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 INPPSSGGT(0.001)S(0.005)S(0.022)S(0.972)PIK;INPPSSGGT(0.001)SS(0.013)S(0.985)PIK;INPPSSGGTSS(0.024)S(0.975)PIK;INPPSSGGTSS(0.041)S(0.959)PIK;INPPSSGGTSS(0.003)S(0.996)PIK;INPPSSGGTSS(0.024)S(0.976)PIK;INPPSSGGTSS(0.004)S(0.996)PIK;INPPS(0.001)SGGT(0.002)S(0.01)S(0.051)S(0.936)PIK 285.32 5.4751e-33 15008220000.0 7111230.0 8143420.0 5861380.0 5209190.0 5200410.0 7084710.0 5692630.0 7336150.0 8507700.0 7744510.0 True False 6716755.896014452 7752197.879677383 6239213.933339582 5704269.851399922 5609652.680714645 7040491.696950269 6268096.595114896 7310702.607920273 6962916.141664035 7675899.666537613 0.8750447749200708 1.0099399700952822 0.8128316164082848 0.7431402310099451 0.7308137058082477 0.9172203914601246 0.816594388595267 0.952422898359474 0.9071140119272578 1.0 22.871904423179686 -7.269059180704388 24.289142984485338 0.9473263579021471 0.8434885053316956 0.2848534515902369 0.07936266545583068 626.2926653882557 1996373.858730964 0.0462939411836519 0.022929171673265702 5.381964382398238e-08 7.269059180704388 -0.10383785257045153 INPY(ph)MSSPCHIEMILTEK ddPTM_KYSE-520_SHP099_60min_R1 1 INPYMSSPCHIEMILTEK 18 0 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A0A0MRF8;A0A0A6YYL6;P18621-2;P18621;P18621-3 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 1 INPY(0.672)MS(0.302)S(0.026)PCHIEMILTEK 114.06 0.00012242 130200000.0 168390.0 206250.0 136120.0 187290.0 126420.0 175450.0 130790.0 162950.0 192730.0 170980.0 True False 159049.0710228573 196341.44041243862 144894.51299970056 205089.98528920813 136368.5347685943 174354.95147012715 144011.52958739226 162384.764482816 157735.09032792784 169465.25022042714 0.9385350142048515 1.1585941079782023 0.8550101735384281 1.2102185257593703 0.8046991025665544 1.0288537103821571 0.8497997636687954 0.958218657049741 0.9307813260993529 1.0 17.37062994558977 -5.779436038131228 24.99999207371435 0.9276965438144423 1.035762807448119 0.19289398663023116 0.11191297365176799 395.1792984839685 548959.413683056 0.03176914207168416 0.03609321989721448 1.661743397400431e-06 5.779436038131228 0.10806626363367677 INPYMS(ph)SPCHIEMILTEK ddPTM_KYSE-520_SHP099_60min_R1 3 INPYMSSPCHIEMILTEK 18 0 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A0A0MRF8;A0A0A6YYL6;P18621-2;P18621;P18621-3 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 1 INPY(0.021)MS(0.644)S(0.335)PCHIEMILTEK;INPYMS(0.5)S(0.5)PCHIEMILTEK;INPYMS(0.5)S(0.5)PCHIEMILTEK 253.13 1.9875e-24 2033850000.0 2350250.0 2710370.0 2040900.0 2713120.0 1790149.0 2601900.0 1801870.0 2522300.0 2714820.0 2189920.0 True False 2219876.94739278 2580159.7568516876 2172459.67955546 2970974.1090707313 1931023.5417454888 2585660.5769741987 1984020.604156544 2513550.7300092475 2221877.123042934 2170519.0125319795 1.0227401531964573 1.188729396957389 1.0008941027525102 1.3687851117254188 0.889659814356055 1.191263730953429 0.9140765838499249 1.158041332739634 1.02366167272179 1.0 21.049608629171576 -5.801589009927972 24.99999977505205 1.0396747892930542 1.1380787409449615 0.15973038177978627 0.12845762656489354 317.7788638221129 197869.8072420357 0.03704546755962654 0.042006206834774136 1.5791049323827386e-06 5.801589009927972 0.0984039516519073 INPYMSS(ph)PCHIEMILTEK ddPTM_KYSE-520_SHP099_60min_R1 1 INPYMSSPCHIEMILTEK 18 0 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A0A0MRF8;A0A0A6YYL6;P18621-2;P18621;P18621-3 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 1 INPYMS(0.257)S(0.743)PCHIEMILTEK 258.55 6.5056e-30 1820200000.0 1142600.0 1365000.0 1001100.0 1304400.0 890200.0 1163700.0 927280.0 1019600.0 1330200.0 978040.0 True False 1079217.7002833702 1299423.3510932282 1065632.5078166353 1428369.7838178412 960253.675454854 1156436.9166474035 1021018.5117806954 1016063.245576429 1088669.2116131869 969375.3265036048 1.1133125331092868 1.340474959044046 1.0992981548851837 1.4734950898428192 0.9905901761687589 1.1929712723538184 1.053274705746184 1.0481628919122798 1.1230626382248223 1.0 19.886695836512093 -5.797700409885096 24.99997927183962 1.0759297009449018 1.25139477437321 0.3956243858583378 0.1138932969840525 178.3149837195378 122937.39134574951 0.032822249792963595 0.03721805422071069 1.593307462083564e-06 5.797700409885096 0.17546507342830808 INQMVCNS(ph)DR ddPTM_KYSE-520_SHP099_60min_R1 9 INQMVCNSDR 10 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 INQMVCNS(1)DR;INQMVCNS(1)DR;INQMVCNS(1)DR;INQMVCNS(1)DR;INQMVCNS(1)DR;INQMVCNS(1)DR;INQMVCNS(1)DR;INQMVCNS(1)DR;INQMVCNS(1)DR 215.02 4.4127e-09 10517680000.0 4770950.0 4274820.0 4105580.0 4285310.0 4139260.0 3856490.0 3862370.0 4053150.0 4540500.0 4402420.0 True False 4506295.892846966 4069451.2305643624 4370232.255960257 4692584.573974568 4464996.2128322385 3832420.215417671 4252816.052698643 4039090.5686623217 3716059.6566904793 4363417.983830927 1.0327444928598377 0.9326292474487002 1.001561682184604 1.075437785553298 1.0232795091778326 0.878306921229889 0.9746524555882269 0.9256712475471219 0.8516396252801594 1.0 22.05702724939121 -6.24683775084738 24.814783811750296 0.924445902701868 1.0114770532880926 0.4152299374759716 0.051631435823199956 762.1244151077942 1295195.1761884443 0.017353663771624825 0.017280122938242947 5.664508712989268e-07 6.24683775084738 0.08703115058622457 INRLS(ph)TPIAGLDNINVFLK ddPTM_KYSE-520_SHP099_60min_R1 3 INRLSTPIAGLDNINVFLK 19 1 Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 Q8WWI1-3 LMO7 LIM domain only protein 7 1 INRLS(0.965)T(0.035)PIAGLDNINVFLK;INRLS(0.793)T(0.207)PIAGLDNINVFLK;INRLS(0.964)T(0.036)PIAGLDNINVFLK 193.77 4.372e-13 1067862000.0 748710.0 946330.0 860450.0 666116.0 833290.0 953990.0 691317.0 843780.0 981970.0 792530.0 True False 707177.5637836182 900866.8863297108 915915.9837686771 729423.4643649227 898865.1822284608 948035.7945453781 761202.0689637369 840853.1241197325 803669.0014492564 785508.8007790102 0.900279618869058 1.1468577887813567 1.1660161959488407 0.9285999897665487 1.1443094989349987 1.2069066490473253 0.9690560668560713 1.0704566559736006 1.0231190289048784 1.0 19.583267913888946 INS(ph)LLEYSR ddPTM_KYSE-520_SHP099_60min_R1 5 INSLLEYSR 9 0 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 INS(1)LLEYSR;INS(1)LLEYSR;INS(1)LLEYSR;INS(1)LLEYSR;INS(1)LLEYSR 170.66 8.184e-05 549420000.0 518193.0 515684.0 469798.0 436994.0 456959.0 499399.0 513725.0 535772.0 594005.0 547308.0 True False 489447.80129786424 490909.76658253564 500081.9307833776 478525.7783729631 492919.07355894777 496282.06559834734 565657.3364728419 533913.5319821254 486148.66564748937 542459.2769191808 0.9022756585113862 0.9049707277025233 0.9218792120645827 0.8821413859685122 0.9086747974122787 0.9148743264506596 1.0427646102494756 0.9842462922090858 0.8961938459389995 1.0 19.04915531117928 -6.588806368854429 12.116607638101785 0.9794787414466677 0.9046167263090646 0.5267155858534096 0.034943716917089175 0.5996196104960838 108.3905113920691 0.013426876461095208 0.010397917738646324 2.577470071534844e-07 6.588806368854429 -0.07486201513760304 INS(ph)WVK ddPTM_KYSE-520_SHP099_60min_R1 4 INSWVK 6 0 P05120;H7C004;H7BYS2 P05120 SERPINB2;SERPINB10 Plasminogen activator inhibitor 2 1 INS(1)WVK;INS(1)WVK;INS(1)WVK;INS(1)WVK 115.7 0.0085464 1524950000.0 3287130.0 3025680.0 2626044.0 2853865.0 3172060.0 2978180.0 2680773.0 3024798.0 3279010.0 3110095.0 True False 3104786.3461688017 2880321.791161729 2795322.9980589612 3125095.4715541992 3421683.0754474555 2959592.073920219 2951771.696663214 3014305.681731163 2683624.441115439 3082541.9779172977 1.0072162417935775 0.9343982374922278 0.9068239842584741 1.0138046761217676 1.1100199445651333 0.9601141185171632 0.957577128814175 0.9778636279165165 0.8705881251059604 1.0 21.555689110641907 -9.62380749567105 7.3061294699298625 1.0000007636027168 0.9728182344541304 0.018620816390799932 0.061958772509072835 0.0 0.0 0.06305891616995132 0.015294033647392872 2.377894072673658e-10 9.62380749567105 -0.027182529148586432 INSWVK ddPTM_KYSE-520_SHP099_60min_R1 1 INSWVK 6 0 P05120;H7C004;H7BYS2 P05120 SERPINB2;SERPINB10 Plasminogen activator inhibitor 2 0 121.29 0.060877 2466100000.0 1868700.0 1802500.0 1319600.0 1437700.0 1801600.0 1843100.0 1355400.0 1559600.0 1561000.0 1584000.0 False True 1765039.485838903 1715905.1943923417 1404663.5274346513 1574338.5757397346 1943375.6702982113 1831596.5292367681 1492417.0594292462 1554190.1116133744 1277561.7496077179 1569966.9923333528 1.1242526081491848 1.0929562231382262 0.8947089552163002 1.002784506570985 1.2378449227202428 1.1666465207109675 0.950604099778653 0.9899508201146764 0.8137507067641915 1.0 20.58230279691396 -6.870226602307895 7.560239639932588 0.9353502638112668 1.080946520119521 0.3515980721187827 0.09837849909857287 0.3055235896789595 19.3490329692184 0.04513634847270521 0.03038437702444421 1.3482592163419945e-07 6.870226602307895 0.14559625630825412 INVYYNEATGGK ddPTM_KYSE-520_SHP099_60min_R1 1 INVYYNEATGGK 12 0 P68371 P68371 TUBB4B Tubulin beta-4B chain 0 155.99 3.3305e-05 0.0 232860.0 263960.0 147050.0 183240.0 260920.0 271800.0 185260.0 257320.0 261130.0 233120.0 False True 219942.79160509817 251278.9653879622 156529.0782883188 200655.07450688502 281452.9195682774 270103.5953809092 203987.88876336341 256427.41697893944 213715.37455160977 231054.73816461547 0.9519077312684211 1.0875300259323744 0.6774545267139223 0.8684309012694986 1.2181222588378846 1.169002624774019 0.8828552505944794 1.1098124150834212 0.9249556025089941 1.0 17.817875149124138 -5.715412071503793 24.999969977116464 1.053796282689258 0.8943536326942793 0.24063087589247645 0.1343410088412653 191.78093350475362 104165.77970263657 0.04105853921421283 0.053006171732956464 1.9256968876817784e-06 5.715412071503793 -0.1594426499949787 INYTEGR ddPTM_KYSE-520_SHP099_60min_R1 4 INYTEGR 7 0 P06744-2;P06744;A0A2U3TZU2;A0A0J9YXP8;A0A2R8Y6C7;K7ERC6;A0A0J9YYH3;A0A0J9YX90;K7EP41;K7EPY4;K7EQ48;K7ERK8;A0A2R8YF08;K7ELR7 P06744-2 GPI Glucose-6-phosphate isomerase 0 ;;; 169.97 0.004792800000000001 1905410000.0 2214720.0 2475060.0 2214900.0 1156080.0 1885980.0 2227980.0 1574140.0 1660540.0 1691080.0 1992970.0 False True 2091865.0666651381 2356154.4024592005 2357675.9979653023 1265953.495611873 2034395.8962416854 2214074.3503927803 1733269.433325923 1654779.9743129476 1384022.500657666 1975313.8363071992 1.0590039052102367 1.1928000296216086 1.1935703353209532 0.640887271856781 1.0299102141890215 1.1208721924066194 0.8774653432116022 0.8377301590751363 0.7006595484822109 1.0 20.913650455076834 -5.220144177865567 24.999485790228118 0.8953562289432797 1.1528923917771559 0.4193808670192998 0.14081089112528863 522.2195457242827 316143.07809719595 0.039698115780248885 0.06875833285751799 6.023595804569084e-06 5.220144177865567 0.25753616283387615 IPAKLS(ph)PTQLR ddPTM_KYSE-520_SHP099_60min_R1 1 IPAKLSPTQLR 11 1 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 IPAKLS(0.936)PT(0.064)QLR 119.92 0.00036045 2128900000.0 1623500.0 1560700.0 1367500.0 963550.0 1072900.0 1512800.0 1071700.0 1270600.0 1484700.0 1303600.0 True False 1533441.2186329856 1485721.6293415395 1455651.2380773602 1055125.5022981286 1157331.1260340533 1503358.0540553315 1180037.8947840664 1266192.585160269 1215115.9062412411 1292051.118185454 1.1868270512288537 1.149893845862751 1.126620470033465 0.8166282954655371 0.895731685646772 1.163543789325174 0.9133058887339549 0.9799864473926537 0.9404549782424553 1.0 20.301231718685553 -5.086482304202025 7.774319192238221 0.9618450981181584 1.1610968342445702 0.5327091206649676 0.08458768934529746 0.22916417613344342 18.3639408309971 0.023685319477233343 0.041331355778063676 8.194410115095753e-06 5.086482304202025 0.19925173612641178 IPAVTLAVTS(ph)VAGSPAR ddPTM_KYSE-520_SHP099_60min_R1 1 IPAVTLAVTSVAGSPAR 17 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 IPAVTLAVT(0.12)S(0.704)VAGS(0.176)PAR 91.65700000000001 0.001349 0.0 38574.0 58691.0 43397.0 31386.0 41863.0 49602.0 34622.0 44505.0 44922.0 42339.0 True False 36434.223324637416 55871.396263013 46194.44005765506 34368.916003455 45157.37993211255 49292.4155190723 38121.92963815807 44350.6225425451 36765.297191465645 41963.90939924356 0.8682275757008993 1.3314154248941386 1.1008135495232902 0.8190113003168988 1.0761004057674035 1.1746383076492117 0.9084456187212447 1.056875376423927 0.8761170662552326 1.0 15.3568614666204 -6.7816963337007765 24.99756573525067 0.965099146828614 1.0653618788248962 0.1069397617997353 0.142974449135485 622.9413808203772 768717.3362773652 0.060569007112928536 0.04089124718201618 1.653117282737901e-07 6.7816963337007765 0.10026273199628222 IPAVTLAVTSVAGS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 1 IPAVTLAVTSVAGSPAR 17 0 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 IPAVTLAVT(0.001)S(0.001)VAGS(0.998)PAR 99.01100000000001 0.00057889 16132000.0 91848.0 109890.0 96444.0 75155.0 90248.0 92172.0 63832.0 76332.0 109610.0 87156.0 True False 86753.00834555126 104610.71945174715 102660.93455585597 82297.70860382522 97350.00415912137 91596.7203585326 70284.761500286 76067.22210802276 89707.5870432426 86383.86564634187 1.0042732829382823 1.2109983579575676 1.1884271881991586 0.9526976824671692 1.1269466054885202 1.0603452354578842 0.8136329738707678 0.8805721015015031 1.038476182699535 1.0 16.39847425761351 -6.595945785775548 7.506515372737311 0.923773300170414 1.0995056701373385 0.41527003447798727 0.09203983728532283 0.2234287404635578 19.550714692692765 0.03579082528466183 0.027658695478871703 2.535445117621712e-07 6.595945785775548 0.17573236996692443 IPCES(ph)PPLEVVDTTASTK ddPTM_KYSE-520_SHP099_60min_R1 6 IPCESPPLEVVDTTASTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCES(1)PPLEVVDTTASTK;IPCES(1)PPLEVVDTTASTK;IPCES(1)PPLEVVDTTASTK;IPCES(1)PPLEVVDTTASTK;IPCES(1)PPLEVVDTTASTK;IPCES(1)PPLEVVDTTASTK 164.53 2.4569e-08 2766120000.0 1792370.0 2032830.0 1490050.0 1269250.0 1263590.0 2083190.0 1495720.0 2365800.0 2449940.0 2029960.0 True False 1692943.663098988 1935169.7954599631 1586101.0071642955 1389879.1383860721 1363027.3441563705 2070188.0384899038 1646921.974420477 2357593.591981871 2005092.6539615167 2011976.1336849844 0.841433272868063 0.9618254228074026 0.7883299312598266 0.6908029946858634 0.6774570141942747 1.0289327014522298 0.8185593988155805 1.1717800984367939 0.9965787468309276 1.0 20.940181761138323 -7.245632213950273 24.464773887844803 1.0631345628590123 0.8295911481856876 0.4689904003822838 0.11036930888660774 530.0094812788714 820298.3585877751 0.055017767208124485 0.03161326738494151 5.6802543905171203e-08 7.245632213950273 -0.23354341467332473 IPCES(ph)PPLEVVDTTASTKR ddPTM_KYSE-520_SHP099_60min_R1 3 IPCESPPLEVVDTTASTKR 19 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCES(1)PPLEVVDTTASTKR;IPCES(1)PPLEVVDTTASTKR;IPCES(1)PPLEVVDTTASTKR 149.18 1.0131999999999999e-06 4026600000.0 3718480.0 4056810.0 3861550.0 2712130.0 2602150.0 3220220.0 2634890.0 3050790.0 5266590.0 3082980.0 True False 3512208.501793895 3861914.7582040434 4110471.6916984553 2969890.019768385 2806924.4007917913 3200121.4125000406 2901250.3952482883 3040207.5215497394 4310310.015929851 3055667.1957221455 1.1494080594610876 1.2638531982837082 1.3451961317819587 0.971928495330301 0.9185962413450693 1.0472741982438818 0.9494654389424225 0.9949406551230286 1.410595375688875 1.0 21.543055991877495 -5.266239694032124 24.99203479520862 1.0328615700201 1.2539225389946778 0.3301976039771657 0.1372900333170454 444.99761591249217 2316807.4441093463 0.03887356708032198 0.05983211985060281 5.417018340241295e-06 5.266239694032124 0.22106096897457772 IPCKS(ph)PPPELTDTATSTK ddPTM_KYSE-520_SHP099_60min_R1 1 IPCKSPPPELTDTATSTK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(1)PPPELTDTATSTK 138.44 5.221900000000001e-06 477420000.0 625010.0 625230.0 502590.0 484070.0 470930.0 517890.0 532040.0 718750.0 757780.0 691400.0 True False 590339.4493734547 595193.0123106367 534987.7555724324 530075.8672590479 507989.51177483134 514657.6564084592 585823.7954100169 716256.8240075107 620186.2540792667 685274.733901061 0.8614639066186366 0.8685465593082407 0.7806909099463066 0.7735231448582482 0.7412932166388235 0.7510238316808638 0.854874353932619 1.045211195705521 0.9050184158238764 1.0 19.386322970209388 -7.071835955375559 4.885584312729279 0.9795106019427794 0.7954334072969372 0.7306656176558881 0.05077810664997089 0.1208833549189802 5.385112365466075 0.025974711764807958 0.014903939178417466 8.475474950094106e-08 7.071835955375559 -0.18407719464584216 IPCKS(ph)SPELEDTATSSK ddPTM_KYSE-520_SHP099_60min_R1 4 IPCKSSPELEDTATSSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(0.682)S(0.318)PELEDTATSSK;IPCKS(0.741)S(0.259)PELEDTATSSK;IPCKS(0.5)S(0.5)PELEDTATSSK;IPCKS(0.769)S(0.231)PELEDTATSSK 196.55 1.13e-12 12516200000.0 3625640.0 3162410.0 3135900.0 2399610.0 2236090.0 2948740.0 2773710.0 3355600.0 4260720.0 2983150.0 True False 3424518.521665848 3010483.0767258164 3338045.1316174055 2627668.2129309485 2412057.561388279 2930335.8198804366 3054103.675600929 3343960.2068029246 3487080.65201063 2956721.6118555795 1.158214729426856 1.0181827956526814 1.1289683540827216 0.8887100504811734 0.8157878481750331 0.9910759971891355 1.032935824378892 1.1309689060324897 1.1793740195317908 1.0 21.49556698319081 -9.462767039264259 10.182871695305577 0.9999999999993381 1.0305672161792927 0.0061892034908259674 0.11232667028024451 0.0 0.0 0.1190102007088648 0.028864213414623967 3.4453469372004127e-10 9.462767039264259 0.030567216179954615 IPCKSS(ph)PELEDTATSSK ddPTM_KYSE-520_SHP099_60min_R1 3 IPCKSSPELEDTATSSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 IPCKS(0.143)S(0.857)PELEDTATSSK;IPCKS(0.291)S(0.709)PELEDTATSSK;IPCKS(0.089)S(0.911)PELEDTATSSK 210.38 4.3039e-18 5539880000.0 3289970.0 2985550.0 2908050.0 2346630.0 2146390.0 2968160.0 2379170.0 3249880.0 4217530.0 2668430.0 True False 3107468.8057073997 2842119.696598086 3095507.5560445106 2569653.0096599637 2315298.6817114665 2949634.6124569536 2619679.7220615936 3238606.9248076957 3451732.8672793265 2644789.7862071246 1.1749398087943315 1.0746108108175776 1.17041723776609 0.9715906432567882 0.8754187927471623 1.1152624030233438 0.9905058374482226 1.2245233786433214 1.3051066989446574 1.0 21.334721627599713 -7.269938778307807 24.37847460007902 1.1986112944601433 1.0509821720735946 0.1938102438763687 0.11250002525001146 653.6637534460714 1874861.496151409 0.06072672072139659 0.029961821105364255 5.3710750608840304e-08 7.269938778307807 -0.14762912238654868 IPDWFLNR ddPTM_KYSE-520_SHP099_60min_R1 2 IPDWFLNR 8 0 P62269;J3JS69 P62269 RPS18 40S ribosomal protein S18 0 ; 129.68 0.0066685 668997000.0 460453.0 497617.0 443911.0 454870.0 554167.0 504869.0 448999.0 499999.0 500516.0 481040.0 False True 434910.7541997008 473710.73238165554 472526.2133427132 498100.7080383472 597776.7901210862 501717.9252993533 494388.2007279564 498264.6201696441 409634.91138158593 476778.35984345694 0.9121864388780088 0.9935659255533146 0.9910815027298221 1.0447217197565157 1.2537833938548664 1.0523085096900893 1.0369350674604472 1.0450655108030529 0.8591726174738372 1.0 18.862959230255694 -3.2885981228445997 13.205377598586741 1.0273312135817165 1.0233071674414493 0.0 0.09866630038575783 0.0 0.0 0.023655938782268376 0.0 0.000514519545289849 3.2885981228445997 -0.00402404614026719 IPEISIQDMTAQVT(ph)SPSGK ddPTM_KYSE-520_SHP099_60min_R1 1 IPEISIQDMTAQVTSPSGK 19 0 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 IPEISIQDMTAQVT(0.5)S(0.5)PSGK 231.93 1.2863e-19 452020000.0 198500.0 232010.0 175170.0 164490.0 179980.0 268240.0 180240.0 239930.0 248740.0 277040.0 True False 187488.80930006047 220863.89134589027 186461.73848190976 180123.080144278 194143.4020538809 266565.8146614242 198460.41817288467 239097.73883008288 203575.086225127 274585.64113385865 0.6828063132720802 0.8043533901986543 0.6790658743550648 0.6559814249590321 0.7070413487471375 0.9707929867005506 0.7227632783468694 0.870758346440717 0.7413901374612867 1.0 18.066896659256855 -6.199084734401492 22.12895181231078 0.8444147154105818 0.707063056867499 0.42479113798809576 0.08929297170361823 73.00984976762905 25909.8260224648 0.028067051150718284 0.028067031882578135 6.322884746936672e-07 6.199084734401492 -0.13735165854308273 IPEISIQDMTAQVTS(ph)PSGK ddPTM_KYSE-520_SHP099_60min_R1 5 IPEISIQDMTAQVTSPSGK 19 0 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 IPEISIQDMTAQVT(0.092)S(0.907)PS(0.001)GK;IPEISIQDMTAQVT(0.259)S(0.741)PSGK;IPEISIQDMTAQVT(0.11)S(0.809)PS(0.081)GK;IPEISIQDMTAQVT(0.021)S(0.957)PS(0.021)GK;IPEISIQDMTAQVT(0.001)S(0.96)PS(0.038)GK 267.92 2.9504e-35 1420285000.0 1510900.0 1642310.0 1183120.0 1175470.0 1248280.0 1737730.0 1356380.0 1709410.0 1787460.0 1955660.0 True False 1427087.3650955206 1563410.9624424311 1259385.8082589314 1287186.3153820562 1346512.5342583526 1726884.1824917863 1493496.1273931258 1703480.4556892926 1462902.322199748 1938334.3738804578 0.7362441611343642 0.8065744401532503 0.6497257775693767 0.6640682498990963 0.6946750531811987 0.890911395764314 0.7705048971520915 0.8788372525628805 0.7547213431865646 1.0 20.88638603477706 -6.253503542337306 24.519828466446324 0.8458916767203778 0.7096795213869693 0.48919955596781317 0.07539963002218884 439.19498965591356 1357007.4923555306 0.024562244696054218 0.024127253665787208 5.578230522204695e-07 6.253503542337306 -0.13621215533340847 IPEPES(ph)PAKPNVPTASTAPPADSR ddPTM_KYSE-520_SHP099_60min_R1 2 IPEPESPAKPNVPTASTAPPADSR 24 1 K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-3;Q9BZL4-4;Q9BZL4;K7ER83 K7EL81 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 IPEPES(1)PAKPNVPTASTAPPADSR;IPEPES(1)PAKPNVPTASTAPPADSR 128.3 5.2968999999999994e-05 1789930000.0 1046590.0 1128880.0 817470.0 822130.0 871720.0 1111740.0 831300.0 1253710.0 1158280.0 1178100.0 True False 988533.5663745601 1074646.9103165746 870165.4241982464 900264.9880176028 940319.4045916719 1104801.2182809857 915335.9167061643 1249361.1726281147 947965.5498626691 1167662.9505479296 0.8465915321803159 0.9203399917864081 0.7452196918553582 0.7709973049972602 0.805300368698368 0.9461644884446785 0.7839042219132155 1.0699672983902144 0.8118486155768093 1.0 20.15519246533454 -7.240737992505367 24.965391196151938 0.9556809962830256 0.8324451776722709 0.3305031874308021 0.0842900894078526 923.2428184105718 1113411.5940147198 0.038841344848475186 0.022393872658710824 5.7446292804080956e-08 7.240737992505367 -0.12323581861075472 IPGGNIYIS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 3 IPGGNIYISPLK 12 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 IPGGNIYIS(1)PLK;IPGGNIYIS(1)PLK;IPGGNIYIS(1)PLK 128.95 7.6054e-05 7703280000.0 2606410.0 2521250.0 1863970.0 1745490.0 1862540.0 2888740.0 2261220.0 2520410.0 2598420.0 2716000.0 True False 2461827.2415504795 2400125.3655265933 1984124.488657448 1911380.8447992932 2009111.3015970432 2870710.3021363053 2489806.1849805256 2511667.285978117 2126612.428837721 2691938.3530160235 0.9145184319664195 0.8915974479272583 0.7370616368069695 0.7100388620184408 0.7463437263881073 1.0664101200237321 0.9249120367823317 0.933032988353566 0.7899929901645345 1.0 21.36021394107908 -6.239561151246324 24.99628854919666 0.9375618562845559 0.7965210112141213 0.3919534424807529 0.08885537271908671 940.333585818266 1074349.461828233 0.03133083959474622 0.031306725600619895 5.760217055669558e-07 6.239561151246324 -0.14104084507043457 IPGGNIYIS(ph)PLKS(ph)PYK ddPTM_KYSE-520_SHP099_60min_R1 8 IPGGNIYISPLKSPYK 16 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 IPGGNIYIS(1)PLKS(1)PYK;IPGGNIY(0.141)IS(0.86)PLKS(0.992)PY(0.008)K;IPGGNIYIS(1)PLKS(0.999)PY(0.001)K;IPGGNIY(0.002)IS(0.998)PLKS(1)PYK;IPGGNIYIS(1)PLKS(0.999)PY(0.001)K;IPGGNIYIS(1)PLKS(1)PYK;IPGGNIYIS(1)PLKS(0.998)PY(0.002)K;IPGGNIY(0.104)IS(0.896)PLKS(0.925)PY(0.075)K 167.59 3.0033e-08 140974220000.0 25720240.0 23589530.0 21675610.0 23684330.0 22991340.0 22971470.0 24005010.0 22984140.0 25082280.0 21671440.0 True False 24293487.015172698 22456253.57019362 23072854.502802223 25935281.602246508 24800627.655169882 22828096.53489584 26431670.677120928 22904413.382878583 20527970.22482426 21479447.901725188 1.131010774872919 1.0454762931029515 1.074182847174068 1.2074463794836847 1.1546212811725922 1.0627878630466256 1.2305563345042023 1.066340880253209 0.955702880201846 1.0 24.35645357561309 -7.566938109626431 5.236186851959942 0.9833832611077448 1.1270863790064756 0.5259928778605876 0.05718832038262158 0.16031295838628012 10.237004909826513 0.04116568869504781 0.015107178465137466 2.7105778829989275e-08 7.566938109626431 0.1437031178987308 IPGGNIYIS(ph)PLKS(ph)PYKISEGLPT(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 2 IPGGNIYISPLKSPYKISEGLPTPTK 26 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 3 IPGGNIY(0.074)IS(0.926)PLKS(0.816)PY(0.182)KIS(0.047)EGLPT(0.94)PT(0.015)K;IPGGNIY(0.049)IS(0.951)PLKS(0.996)PY(0.004)KISEGLPT(0.977)PT(0.023)K 129.07 0.00023234 1290880000.0 481950.0 536460.0 591760.0 402320.0 460380.0 439470.0 322320.0 332590.0 636080.0 319530.0 True False 455215.2727564938 510687.6563571236 629905.7964494774 440556.3718380816 496609.2867961202 436727.10471688054 354903.251140058 331436.32291708986 520583.9062719257 316699.2127905784 1.437374184625811 1.612532130589231 1.9889717782974445 1.3910876757669919 1.5680786902508337 1.3789964959769958 1.120631933413559 1.0465334599245013 1.643780234515988 1.0 18.272753755745004 -6.2683995158856405 1.6007886585351305 1.2069930355989786 1.6383554928189754 0.413328382568963 0.22213796246623943 0.38277804200361815 1.949291719612012 0.0969918871127878 0.08767300730353114 5.390145444795485e-07 6.2683995158856405 0.4313624572199968 IPGGNIYIS(ph)PLKSPYK ddPTM_KYSE-520_SHP099_60min_R1 4 IPGGNIYISPLKSPYK 16 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 IPGGNIY(0.092)IS(0.907)PLKS(0.001)PYK;IPGGNIY(0.002)IS(0.987)PLKS(0.01)PY(0.001)K;IPGGNIYIS(1)PLKSPYK;IPGGNIYIS(1)PLKSPYK 174.22 1.7206e-08 10234660000.0 10047500.0 9878900.0 8086460.0 6657620.0 7535800.0 11409900.0 7602670.0 8384390.0 11037700.0 7839270.0 True False 9490145.145805316 9404302.815468792 8607726.15039346 7290358.203113554 8128824.5871632155 11338686.58181248 8371222.078508898 8355306.508021332 9033531.917773932 7769820.16665977 1.2214111706893096 1.2103629960217834 1.1078411038815463 0.9382917553737495 1.0462049845173935 1.4593241978066218 1.0774022948986308 1.0753539115195845 1.1626436293257776 1.0 22.88944977700857 -10.617646161820716 6.952436646236872 0.9996891923333031 1.1415085110624266 0.09763727024098201 0.13136903110760378 0.0006635923470452141 3.649480713790143e-05 0.13336946820623968 0.03227675374068871 2.4118696811725305e-11 10.617646161820716 0.14181931872912346 IPGTPGAGGRLS(ph)PENNQVLTK ddPTM_KYSE-520_SHP099_60min_R1 8 IPGTPGAGGRLSPENNQVLTK 21 1 Q16514-2;Q16514 Q16514-2 TAF12 Transcription initiation factor TFIID subunit 12 1 IPGT(0.002)PGAGGRLS(0.998)PENNQVLTK;IPGTPGAGGRLS(1)PENNQVLTK;IPGTPGAGGRLS(1)PENNQVLTK;IPGTPGAGGRLS(1)PENNQVLTK;IPGTPGAGGRLS(1)PENNQVLTK;IPGTPGAGGRLS(1)PENNQVLTK;IPGT(0.047)PGAGGRLS(0.953)PENNQVLTK;IPGT(0.003)PGAGGRLS(0.997)PENNQVLTK 176.68 1.0704000000000002e-09 5776180000.0 5839920.0 6354150.0 5006620.0 3820900.0 4200950.0 5681120.0 3862890.0 5103100.0 6800100.0 5865840.0 True False 5515967.996008095 6048887.096226406 5329354.736075229 4184037.1872045216 4531540.864864155 5645662.022775542 4253388.619373358 5085398.5371724935 5565373.256571071 5813873.22115447 0.9487595938517526 1.040422944589987 0.9166616700006008 0.7196643318571867 0.7794357896170842 0.9710672744347312 0.7315929428761702 0.8747006244767542 0.9572574159891891 1.0 22.47106818135458 -4.997329744743644 16.33998259718801 0.8497798873800356 0.9905854808453549 0.23081930805041762 0.09461968961786536 1.421704952417354 8644.912119007131 0.024505972607539943 0.0497391112666581 1.006167430711226e-05 4.997329744743644 0.1408055934653193 IPHS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 2 IPHSPAR 7 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 IPHS(1)PAR;IPHS(1)PAR 100.02 0.0034472 802770000.0 355140.0 308680.0 318700.0 282890.0 309480.0 313810.0 320300.0 346030.0 344900.0 304090.0 True False 335439.6762459616 293850.5494618739 339243.91193802946 309775.7805460199 333834.31529967283 311851.3953880913 352679.04982675787 344829.7026940094 282274.8542214617 301395.99917844 1.1129533144445165 0.9749649970897627 1.1255753655083582 1.0278032269519897 1.1076268968720713 1.0346898971391494 1.1701517299105089 1.1441084275636144 0.9365580664338622 1.0 18.20130074072977 -3.9214617413580535 20.986052739769907 1.066538516133799 3.1785850090232635 0.0366235181675284 0.07358610753095673 2032.1936541527648 740272.7785269506 0.016910536339419954 73683.35290327502 0.00011982246746799844 3.9214617413580535 2.1120464928894647 IPIT(ph)IS(ph)Y(ph)SKYK ddPTM_KYSE-520_SHP099_60min_R1 1 IPITISYSKYK 11 1 O95932-2;O95932 O95932-2 TGM6 Protein-glutamine gamma-glutamyltransferase 6 3 IPIT(1)IS(0.994)Y(0.362)S(0.282)KY(0.362)K 68.536 0.020213 858660000.0 831880.0 838550.0 601990.0 566350.0 554700.0 791230.0 691980.0 879560.0 1098800.0 848240.0 True False 785733.958088333 798264.7993107885 640795.238618055 620175.7337206629 598351.734188731 786291.6400781331 761932.0914739928 876509.0116508474 899285.618493887 840725.2535207346 0.9345906463471716 0.9494954457093646 0.7621933990142135 0.7376675449244937 0.7117090056269779 0.9352539807569143 0.906279534584245 1.04256296332275 1.0696545806467894 1.0 19.681274883545978 -6.938479571947458 1.707527047540552 1.0433816826480824 0.8234066746540364 0.5591753754293816 0.07983586917344933 0.30604284718001545 1.773312166130438 0.054627646217269295 0.02867705087526342 1.1521802540331992e-07 6.938479571947458 -0.219975007994046 IPLFNTDVDNLEGKT(ph)PPVFASEGK ddPTM_KYSE-520_SHP099_60min_R1 2 IPLFNTDVDNLEGKTPPVFASEGK 24 1 Q96PZ0;Q96PZ0-2 Q96PZ0 PUS7 Pseudouridylate synthase 7 homolog 1 IPLFNTDVDNLEGKT(1)PPVFASEGK;IPLFNTDVDNLEGKT(1)PPVFASEGK 121.3 0.00048171 1003210000.0 1237460.0 1337890.0 1073530.0 925340.0 838460.0 1309710.0 947410.0 1257930.0 1439290.0 1302940.0 True False 1168815.6269846489 1273615.7561861693 1142731.4615087304 1013284.0353863841 904442.0318151843 1301535.6140777417 1043183.4486305615 1253566.5344330685 1177951.2175482966 1291396.9652719803 0.9050784990333978 0.9862310276669528 0.884880088957047 0.7846417969342038 0.7003594217249073 1.007850915774474 0.8077945640911873 0.9707058078528593 0.912152691407486 1.0 20.300501111253986 -7.282921597213889 24.15216507792693 0.9560719574170836 0.8690181577506074 0.18777026841077116 0.08829016856287823 1065.0763541484612 1197441.8679908682 0.0504976093664431 0.02429967188067042 5.2128881040376474e-08 7.282921597213889 -0.0870537996664762 IPLNLDGPHPS(ph)PPTPDSVGQLHIMDYNETHHEHS ddPTM_KYSE-520_SHP099_60min_R1 3 IPLNLDGPHPSPPTPDSVGQLHIMDYNETHHEHS 34 0 A0A2R8Y6S1;A0A2R8YFV7;A0A2R8Y5N2;A0A2R8Y5S3;Q92574-2;Q92574 A0A2R8Y6S1 TSC1 Hamartin 1 IPLNLDGPHPS(0.819)PPT(0.181)PDSVGQLHIMDYNETHHEHS;IPLNLDGPHPS(0.946)PPT(0.054)PDSVGQLHIMDYNETHHEHS;IPLNLDGPHPS(0.997)PPT(0.003)PDSVGQLHIMDYNETHHEHS 190.11 1.1939e-15 1593590000.0 458230.0 584260.0 598170.0 787180.0 508250.0 461410.0 493610.0 507640.0 548470.0 389520.0 True False 432811.0684411417 556191.2726078611 636728.9953058395 861993.350525702 548246.3834530785 458530.1690386505 543508.915969361 505879.1153240665 448881.6738035517 386069.1558419747 1.1210713466534978 1.4406519251579903 1.6492615006169113 2.2327433763668285 1.420072997692377 1.1876892056777917 1.4078019643502142 1.3103328967599064 1.1626975815371465 1.0 18.558499772328755 -5.996194912591341 24.99976035116445 1.2517478379962619 1.629619608911494 0.31038214392977026 0.27598364684854737 155.1802924491715 1019532.8287873989 0.0911722828243971 0.10292239376981738 1.008800032156655e-06 5.996194912591341 0.37787177091523216 IPLRPRES(ph)LETENVLDDIK ddPTM_KYSE-520_SHP099_60min_R1 1 IPLRPRESLETENVLDDIK 19 2 I6L8A6;Q99708-3;Q99708;Q99708-2;J3QSH7 I6L8A6 RBBP8 DNA endonuclease RBBP8 1 IPLRPRES(0.862)LET(0.138)ENVLDDIK 166.69 6.0664e-09 573950000.0 667700.0 549050.0 538970.0 494330.0 468130.0 508970.0 482810.0 556150.0 737430.0 530490.0 True False 630661.3499730488 522672.81385914853 573712.8685824911 541310.974574266 504969.1677046524 505793.32943716494 531617.1465715182 554220.8454563861 603531.3010975127 525790.2713149746 1.1994542013791867 0.9940709107301862 1.0911439406204007 1.0295188102672095 0.9604003635170927 0.9619678359057531 1.0110821283208051 1.0540720810035302 1.1478555881000074 1.0 19.004127922487314 -4.254536002518492 24.168815858999405 1.026828753181962 1.1994543306879946 0.46754819955116866 0.05494894093462137 483.1815470916604 1691553.2689611372 0.014482101520684966 0.13632474217129475 5.5649849925350485e-05 4.254536002518492 0.17262557750603258 IPMPPS(ph)SPQPR ddPTM_KYSE-520_SHP099_60min_R1 8 IPMPPSSPQPR 11 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 IPMPPS(0.5)S(0.5)PQPR;IPMPPS(0.5)S(0.5)PQPR;IPMPPS(0.669)S(0.331)PQPR;IPMPPS(0.735)S(0.265)PQPR;IPMPPS(0.745)S(0.255)PQPR;IPMPPS(0.656)S(0.344)PQPR;IPMPPS(0.5)S(0.5)PQPR;IPMPPS(0.5)S(0.5)PQPR 110.08 0.000308 6579210000.0 2116470.0 2436040.0 1966820.0 1766629.0 1835430.0 2489951.0 1900720.0 2625657.0 3020370.0 2810697.0 True False 1999065.1900216544 2319008.981829415 2093604.3642232667 1934528.8890036228 1979867.8988318418 2474410.2922085742 2092863.3268395762 2616549.2086999505 2471946.9453316187 2785796.411269177 0.717591989829186 0.8324402215641096 0.7515281288159332 0.6944257955025053 0.710700857687528 0.8882236627913742 0.7512621232382489 0.939246385024913 0.8873394104939017 1.0 21.40965839754883 -7.4123680778541425 0.7859515753554249 0.9913685005656642 0.7483499540354966 0.6588753398958589 0.05942068078207272 0.3801507713601292 0.4532880184402856 0.0551401882548385 0.02369505725063365 3.8692957127106734e-08 7.4123680778541425 -0.24301854653016752 IPMPPSS(ph)PQPR ddPTM_KYSE-520_SHP099_60min_R1 1 IPMPPSSPQPR 11 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 IPMPPS(0.109)S(0.891)PQPR 103.91 0.0010837 1788200000.0 247200.0 439940.0 319760.0 282990.0 323590.0 493580.0 396620.0 475510.0 573940.0 559660.0 True False 233487.32321901698 418804.6220365971 340372.2412340893 309885.2845159537 349054.69202475453 490499.3841357949 436714.2202381789 473860.5667948685 469726.96385000163 554701.8478088916 0.4209240047447239 0.7550085215884942 0.613612957264487 0.5586519780671738 0.6292654214215138 0.8842577072228972 0.7872954127757615 0.8542617419910329 0.8468098054936246 1.0 19.08135300577764 -6.22096116118311 5.345816340638522 0.860343529693893 0.6011887427776547 0.697033423628677 0.09177728525001963 0.12152221279805112 9.045466250390826 0.02974149165408584 0.02918519365613543 6.012275026627918e-07 6.22096116118311 -0.2591547869162384 IPMTPTSSFVSPPPPT(ph)ASPHSNR ddPTM_KYSE-520_SHP099_60min_R1 2 IPMTPTSSFVSPPPPTASPHSNR 23 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 IPMTPTSSFVSPPPPT(0.422)AS(0.422)PHS(0.155)NR;IPMTPTSSFVSPPPPT(0.622)AS(0.277)PHS(0.101)NR 78.67399999999999 0.007071600000000001 439330000.0 139558.0 159128.0 134930.0 117261.0 130235.0 152540.0 123468.0 151211.0 175272.0 140413.0 True False 131816.43953802422 151483.2520240024 143627.80369563334 128405.45018419484 140483.75356421387 151587.94127815997 135949.35037155857 150686.48433391255 143447.02304756147 139169.05005966092 0.9471677753172514 1.0884837681874129 1.0320383995871278 0.9226580919331432 1.0094468095024673 1.0892360134180348 0.9768648295959332 1.082758589422822 1.0307393992131628 1.0 17.086478878941694 -6.022759075050685 24.835779329242364 1.0387279315217515 1.0014794494535115 0.10539846011430809 0.05248489605688932 1758.5116397022052 1918966.8084647497 0.017279085549823103 0.017406282726213817 9.489447445939117e-07 6.022759075050685 -0.03724848206823994 IPMTPTSSFVSPPPPTAS(ph)PHSNR ddPTM_KYSE-520_SHP099_60min_R1 3 IPMTPTSSFVSPPPPTASPHSNR 23 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 IPMTPTSSFVSPPPPT(0.181)AS(0.558)PHS(0.261)NR;IPMTPTSSFVSPPPPT(0.274)AS(0.671)PHS(0.055)NR;IPMTPTSSFVSPPPPT(0.038)AS(0.951)PHS(0.011)NR 110.12 0.00017282 1195600000.0 415630.0 393355.0 320156.0 282783.0 300391.0 372688.0 269047.0 383240.0 448460.0 373274.0 True False 392574.1753621367 374457.6353621078 340793.7680277121 309658.611298191 324030.0627090085 370361.9159504061 296244.89640568185 381910.62988888804 367030.9687566158 369967.08276277775 1.0611056865668629 1.012137708484215 0.9211461881494698 0.8369896288766414 0.8758348453307562 1.001067211668346 0.8007331198046977 1.0322827291469292 0.9920638506965644 1.0 18.49703738937437 -9.783070518909167 12.252961567249486 0.9999999965741548 0.9435374805063753 0.03132270745931731 0.083005432947508 0.0 0.0 0.08329376713975778 0.02020170602538637 1.6478947915832128e-10 9.783070518909167 -0.05646251606777952 IPNSYEVLFPES(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 4 IPNSYEVLFPESPAR 15 0 O14686-3;O14686 O14686-3 KMT2D Histone-lysine N-methyltransferase 2D 1 IPNSYEVLFPES(1)PAR;IPNSYEVLFPES(1)PAR;IPNSYEVLFPES(1)PAR;IPNSYEVLFPES(1)PAR 212.92 4.3301e-14 837200000.0 717930.0 776070.0 642940.0 511724.0 553909.0 628430.0 521793.0 676520.0 812760.0 686710.0 True False 678104.9917420272 738786.4322951809 684384.9411403718 560358.0951045699 597498.4869889044 624507.7352657277 574540.9286489344 674173.3100209543 665183.2720122787 680626.2836522954 0.996295629524122 1.0854509295920713 1.0055223513671956 0.8232977605531825 0.8778657265227542 0.9175486610869169 0.8441356768738074 0.990519064887248 0.9773105858369908 1.0 19.376503339172956 -5.021235405528346 18.908838226431644 0.9134966981436998 1.0420269406228215 0.4237319709887666 0.05974718259177522 28.454948339442446 25339.451597824263 0.01647007973090263 0.029165540988755297 9.522798491346495e-06 5.021235405528346 0.1285302424791217 IPNYQLS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 3 IPNYQLSPTK 10 0 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 1 IPNY(0.001)QLS(0.993)PT(0.006)K;IPNYQLS(0.787)PT(0.213)K;IPNYQLS(0.995)PT(0.005)K 107.39 0.0010172 1529300000.0 2851200.0 2431970.0 2123810.0 2156430.0 2225650.0 2855770.0 2371240.0 2834710.0 2586990.0 2800760.0 True False 2693038.2522737146 2315134.510738607 2260714.1908161486 2361376.4588456806 2400795.992783753 2837946.080135908 2610948.080272253 2824877.0526362876 2117257.8287108685 2775947.4453583094 0.9701330105426786 0.8339979615283306 0.8143937287416274 0.8506560391819242 0.8648564283153664 1.0223342249801115 0.9405610630842621 1.0176262729180243 0.7627153865074634 1.0 21.404548824186076 -6.137892085528493 9.798739222470134 0.9491908120356397 0.8607512679731651 0.2098789784268783 0.07899103713438066 0.573519140351806 43.19076549385417 0.025313789267088535 0.02532453692445052 7.279606673723144e-07 6.137892085528493 -0.08843954406247456 IPNYQLS(ph)PTKLPSINK ddPTM_KYSE-520_SHP099_60min_R1 4 IPNYQLSPTKLPSINK 16 1 A0A0C4DG07;O60934 A0A0C4DG07 NBN Nibrin 1 IPNYQLS(0.927)PT(0.073)KLPSINK;IPNYQLS(0.942)PT(0.058)KLPSINK;IPNYQLS(0.998)PT(0.002)KLPSINK;IPNYQLS(0.869)PT(0.131)KLPSINK 237.06 8.101300000000001e-23 61735790000.0 17307650.0 18874800.0 15335920.0 12531990.0 12844930.0 17965360.0 13690630.0 15922750.0 18595320.0 15648680.0 True False 16347560.152555104 17968026.276347615 16324497.941539573 13723026.561719807 13855752.913345689 17853231.524328075 15074612.48807277 15867517.696647774 15218878.63787019 15510044.869688822 1.05399825016 1.158476743768963 1.0525113291865733 0.8847831632349837 0.8933406079581301 1.1510754272038586 0.9719257819513459 1.0230478267446899 0.9812272476150178 1.0 23.886699524227314 -5.003297103813245 24.16723743548763 0.9881878554105928 1.1060516781781982 0.3074734597128308 0.07303868022089711 108.44926653453138 794955.0737564156 0.019821520132562515 0.039926119842162454 9.924368833048776e-06 5.003297103813245 0.11786382276760532 IPPMLS(ph)PVHVQDSTDLAPPS(ph)PEPPMLAPVAK ddPTM_KYSE-520_SHP099_60min_R1 4 IPPMLSPVHVQDSTDLAPPSPEPPMLAPVAK 31 0 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 2 IPPMLS(0.756)PVHVQDS(0.116)T(0.129)DLAPPS(1)PEPPMLAPVAK;IPPMLS(0.995)PVHVQDS(0.002)T(0.003)DLAPPS(1)PEPPMLAPVAK;IPPMLS(0.941)PVHVQDS(0.028)T(0.031)DLAPPS(1)PEPPMLAPVAK;IPPMLS(0.998)PVHVQDS(0.001)T(0.001)DLAPPS(1)PEPPMLAPVAK 146.36 9.0083e-07 1074558000.0 620367.0 629633.0 582593.0 578885.0 592352.0 542213.0 558844.0 599186.0 695567.0 607415.0 True False 585954.0058390457 599384.4855815995 620147.8769617584 633902.0563518787 638966.732378156 538828.8475433002 615337.4053118482 597107.5636170643 569269.5666171621 602033.7756617195 0.9732909174323321 0.9955994328105462 1.030088181149187 1.0529343734163943 1.0613469845206642 0.8950143153530744 1.0220978127605982 0.9918173826057506 0.9455774569980813 1.0 19.199484902638993 -6.221767863717136 24.99996781266229 0.9735896256748218 1.023244526704009 0.29407177784250027 0.03997662995579259 750.6478028926438 473038.8534782236 0.013509616068893705 0.013509482468378329 6.001117584064594e-07 6.221767863717136 0.049654901029187126 IPRPLS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 4 IPRPLSPTK 9 1 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 IPRPLS(0.979)PT(0.021)K;IPRPLS(0.995)PT(0.005)K;IPRPLS(0.947)PT(0.053)K;IPRPLS(0.984)PT(0.016)K 87.066 0.007245399999999999 24377730000.0 12774500.0 11336400.0 10897000.0 8550400.0 9634900.0 11448300.0 10368300.0 10490800.0 12208000.0 11912100.0 True False 12065873.01966559 10791782.327716677 11599438.05581645 9363027.445228502 10393111.814917978 11376846.91316874 11416428.948856622 10454409.86337114 9991334.938636122 11806568.06147356 1.0219627716404887 0.9140490506239263 0.9824563747416996 0.7930354863900998 0.8802822090893727 0.9636032125451376 0.966955756271798 0.8854740690891626 0.8462522628602981 1.0 23.493086326640302 -3.717012136011175 1.3575076509588073 0.9080933048457239 1.2950067865905979 0.2073073180748266 0.06224349903097343 8.057123866481614 4.70699653856748 0.018171623750012803 6.160817574719339 0.00019186151257594134 3.717012136011175 0.38691348174487394 IPRPS(ph)VSQGCS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 IPRPSVSQGCSR 12 1 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4M5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 2 IPRPS(0.501)VS(0.501)QGCS(0.998)R 72.797 0.06612799999999999 1646600000.0 1135400.0 1006400.0 939950.0 978970.0 966250.0 960030.0 894850.0 935010.0 1095400.0 972990.0 True False 1072417.0986362142 958051.0333628036 1000540.6809731738 1072011.0144619378 1042288.3777895459 954038.0966649527 985310.1708943954 931766.6685429737 896502.9727868635 964370.0655747645 1.1120389743713723 0.9934475027403565 1.0375069868814848 1.1116178868772948 1.0807971078699359 0.9892863027600779 1.0217137653553676 0.9661920271111286 0.9296254672240866 1.0 19.879227344252104 -6.702658012891842 1.4730332307113 0.9649301273059948 1.0622037958322594 0.5219944839537853 0.04019742467937522 0.3487304378720796 1.5426742865268486 0.02366709333565761 0.014811713837908422 1.9830880025327995e-07 6.702658012891842 0.09727366852626462 IPRPSVS(ph)QGCS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 IPRPSVSQGCSR 12 1 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4M5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 2 IPRPS(0.183)VS(0.821)QGCS(0.995)R 75.574 0.053604 585210000.0 590580.0 459900.0 483160.0 461160.0 434990.0 459220.0 437370.0 427990.0 535950.0 485740.0 True False 557819.3501079584 437805.7136760259 514305.2666833327 504988.50774719054 469221.2382454592 456353.83764099027 481583.62791985366 426505.4025836167 438634.9902000356 481436.72150000196 1.1586555931379159 0.9093733280501831 1.0682717867488856 1.048919796092431 0.9746270221837603 0.9478999362972116 1.0003051417004378 0.8859012691320327 0.9110958317292251 1.0 18.876986661752866 -5.91306631867965 3.436954711329528 0.9459308946208118 1.0380853875798237 0.32713889614291103 0.06552921192113613 0.3038990231874948 7.129672125477651 0.02080503965730586 0.023761551562271315 1.2216131002216223e-06 5.91306631867965 0.0921544929590119 IPRPSVSQGCS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 IPRPSVSQGCSR 12 1 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4M5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 IPRPS(0.011)VS(0.023)QGCS(0.966)R;IPRPS(0.01)VS(0.044)QGCS(0.946)R 64.374 0.049718 892180000.0 978710.0 917240.0 876510.0 892000.0 953930.0 914690.0 819450.0 840570.0 1089110.0 832760.0 True False 924419.005289986 873174.4135946913 933011.2370655866 976775.4118104208 1028998.8638807565 908981.0804229729 902288.0030613091 837654.2588605135 891355.078228867 825382.3942774757 1.1199887612083186 1.0579028819230532 1.1303987624818763 1.1834216704676281 1.2466934974806714 1.1012847944481272 1.0931757320207383 1.0148680958887915 1.0799298414998815 1.0 19.6547031398723 -6.901520202285584 2.273225586846575 1.0363597887827838 1.144180169916736 0.4821910119748454 0.05047185463798754 0.306977452796406 3.2057300682081786 0.02908316136338768 0.01709976940555653 1.2545263790928612e-07 6.901520202285584 0.1078203811339522 IPS(ph)PNILK ddPTM_KYSE-520_SHP099_60min_R1 8 IPSPNILK 8 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 IPS(1)PNILK;IPS(1)PNILK;IPS(1)PNILK;IPS(1)PNILK;IPS(1)PNILK;IPS(1)PNILK;IPS(1)PNILK;IPS(1)PNILK 126.39 0.00086134 10937620000.0 9861160.0 10352750.0 8413640.0 6642590.0 7558440.0 9341510.0 7655240.0 8949870.0 10921910.0 9225230.0 True False 9314141.797064895 9855388.35020545 8955996.696699983 7273899.756432485 8153246.226359243 9283206.1710328 8429106.367142648 8918824.98988536 8938766.462945549 9143501.639320327 1.0186624517034868 1.0778571207144267 0.9794930924697376 0.7955267077497 0.8916984485787555 1.0152791061043498 0.9218685247339461 0.9754277236120594 0.9776086684892861 1.0 23.12431534185353 -4.98403203517595 10.489853899494822 0.9350713991755305 1.0435428477057944 0.3295369375756074 0.061165552305765127 0.3923565626153984 244.1255754986944 0.016920023488215707 0.034721889459422756 1.037451886686486e-05 4.98403203517595 0.10847144853026391 IPS(ph)TPK ddPTM_KYSE-520_SHP099_60min_R1 4 IPSTPK 6 0 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 IPS(0.96)T(0.04)PK;IPS(0.988)T(0.012)PK;IPS(0.991)T(0.009)PK;IPS(0.979)T(0.021)PK 84.568 0.017747 1023340000.0 8301500.0 5078660.0 4051420.0 3135260.0 3749460.0 4485550.0 3865660.0 4229130.0 5046540.0 4474740.0 True False 7840999.246370029 4834673.550375923 4312581.015701196 3433234.16774971 4044521.170490861 4457554.018619712 4256438.638005955 4214460.135116364 4130215.548920771 4435097.284895036 1.7679430106470817 1.0900941376960895 0.9723757425544861 0.7741057179157149 0.9119351641429847 1.0050634140092392 0.9597170850124183 0.9502520157719845 0.9312570353275845 1.0 22.08053432005035 -4.224982206319913 2.3382737269565084 0.9327022106752625 2.0183754414500963 0.942052592003415 0.061518219358150064 0.1484263410437648 0.8964290747737604 0.017331734515769782 0.34036462006758456 5.9568654917816155e-05 4.224982206319913 1.0856732307748338 IPSIVS(ph)SPLNS(ph)PLDR ddPTM_KYSE-520_SHP099_60min_R1 2 IPSIVSSPLNSPLDR 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 2 IPS(0.021)IVS(0.94)S(0.043)PLNS(0.996)PLDR;IPSIVS(0.696)S(0.304)PLNS(1)PLDR 178.85 1.1164e-08 246501000.0 263160.0 262540.0 267690.0 224127.0 256060.0 260280.0 280500.0 318170.0 336870.0 316420.0 True False 248561.99020354604 249927.18431942564 284945.7257191435 245427.9626937606 276210.46521789505 258655.49597403596 308855.6774161898 317066.3425314364 275702.89980163454 313616.76497103466 0.7925660167641324 0.7969190816138565 0.9085793795030722 0.7825728408251009 0.8807260837710815 0.8247502202183775 0.984818772187499 1.0109993404233997 0.8791076581224802 1.0 18.258643157914445 -6.759690679036528 24.999792221223178 0.9696480708264901 0.8330517252973869 0.649028533864265 0.049596224368407375 28.781221120090354 411471.66743751225 0.019075276999638714 0.013995146950530302 1.7390389971398697e-07 6.759690679036528 -0.13659634552910316 IPSIVS(ph)SPLNSPLDR ddPTM_KYSE-520_SHP099_60min_R1 1 IPSIVSSPLNSPLDR 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IPSIVS(0.594)S(0.406)PLNSPLDR 171.76 2.7944e-08 263380000.0 212460.0 224080.0 188550.0 179420.0 152570.0 237350.0 179120.0 249360.0 227910.0 260940.0 True False 200674.42027149015 213314.8604490626 200704.23469066666 196472.02285541015 164576.3909954474 235868.6106094881 197227.19764273762 248495.0283610617 186527.28914355842 258628.27460824777 0.7759183352069988 0.8247932704657958 0.7760336142468551 0.759669541750655 0.6363433821949142 0.911998546820782 0.7625894652913868 0.9608192636225285 0.7212176991324597 1.0 17.98052048124485 -9.605624814411195 0.3075307303318872 1.0843760917948297 0.7645853558058383 0.34746062900179164 0.08644498261929458 10.977712722658142 1.0688575598129662 1.014953786489095 0.09316276986759972 2.4795632192202083e-10 9.605624814411195 -0.31979073598899144 IPSIVSS(ph)PLNS(ph)PLDR ddPTM_KYSE-520_SHP099_60min_R1 6 IPSIVSSPLNSPLDR 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 2 IPSIVS(0.158)S(0.842)PLNS(1)PLDR;IPSIVS(0.17)S(0.83)PLNS(1)PLDR;IPSIVS(0.175)S(0.825)PLNS(1)PLDR;IPSIVS(0.006)S(0.994)PLNS(1)PLDR;IPSIVS(0.128)S(0.872)PLNS(1)PLDR;IPSIVS(0.153)S(0.847)PLNS(1)PLDR 237.73 1.1512999999999998e-18 961407000.0 978688.0 878611.0 994137.0 918040.0 917278.0 1040169.0 1148521.0 1261231.0 1365520.0 1218543.0 True False 924398.22567384 836401.2087380015 1058220.6616954391 1005290.2455812104 989462.5600021101 1033676.9194398997 1264624.711164776 1256856.0840345286 1117575.9899579312 1207747.6570321098 0.7653902040641786 0.6925297713210671 0.8761935123897365 0.8323677878635564 0.8192626615675593 0.8558715998506118 1.0470934915928005 1.0406611651999365 0.9253389840591666 1.0 20.203887623343235 -6.621101099639943 4.008232583709713 1.0061619120578063 0.8004260346373144 0.759910510007162 0.05472185915664523 0.11696053183046458 3.511808163194736 0.02349887206623271 0.017830559978148086 2.392758680020308e-07 6.621101099639943 -0.20573587742049182 IPSIVSS(ph)PLNSPLDR ddPTM_KYSE-520_SHP099_60min_R1 3 IPSIVSSPLNSPLDR 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IPSIVS(0.059)S(0.941)PLNSPLDR;IPSIVS(0.002)S(0.998)PLNSPLDR;IPSIVS(0.04)S(0.96)PLNSPLDR 271.68 2.6899999999999997e-25 1691540000.0 823890.0 865230.0 596420.0 547837.0 575200.0 864460.0 690800.0 799770.0 789230.0 873250.0 True False 778187.1793160033 823663.0520632925 634866.1875057407 599903.2637668002 620464.9675596862 859064.5844848446 760632.8055583028 796995.7845377204 645925.7268692491 865513.6843782191 0.8991044201398726 0.9516464810778908 0.7335137490770299 0.6931181731664564 0.7168748209976891 0.9925488181067784 0.8788223910113423 0.9208355672738766 0.7462917554368642 1.0 19.723197104229214 -6.257840630656514 24.99507872507433 0.9009470955837355 0.7978361888269214 0.22964931771232266 0.09928571641071622 573.922328330397 3986180.0016200747 0.03590241144127708 0.03454835104877287 5.522800676080848e-07 6.257840630656514 -0.10311090675681411 IPSIVSSPLNS(ph)PLDR ddPTM_KYSE-520_SHP099_60min_R1 1 IPSIVSSPLNSPLDR 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 IPSIVSSPLNS(1)PLDR 144.97 8.7242e-06 75315000.0 29461.0 35016.0 27533.0 23194.0 22747.0 37706.0 45809.0 45113.0 60271.0 50974.0 True False 27826.73960095253 33333.778799912456 29307.821234357572 25398.350786469622 24537.059487274313 37470.662867669496 50439.8207727567 44956.51353245338 49327.305708268235 50522.41001717191 0.5507801308665715 0.6597820410503524 0.5800954709879482 0.5027145533603218 0.48566684524618847 0.7416642011917821 0.9983652948387233 0.8898331159810714 0.9763450653185888 1.0 15.624635839674383 -6.5520859306694925 3.5226651173637142 0.9557374216594635 0.561470813341656 0.9263661608990663 0.054368769861726264 0.06415579053250425 1.6878010213456052 0.023324476810743473 0.018273001834973938 2.8048786022496974e-07 6.5520859306694925 -0.39426660831780747 IPSKEEEADMS(ph)SPTQR ddPTM_KYSE-520_SHP099_60min_R1 3 IPSKEEEADMSSPTQR 16 1 E9PDI4;O00515 E9PDI4 LAD1 Ladinin-1 1 IPSKEEEADMS(0.893)S(0.104)PT(0.002)QR;IPSKEEEADMS(0.976)S(0.024)PTQR;IPSKEEEADMS(0.496)S(0.496)PT(0.007)QR 183.31 5.2917999999999994e-09 7089330000.0 3810890.0 3356430.0 3705520.0 3356830.0 3495560.0 3907000.0 3994300.0 4499500.0 5800700.0 4514000.0 True False 3599492.3348791245 3195182.064695854 3944383.748241626 3675862.113932259 3770640.6849842393 3882614.9637719407 4398082.82461137 4483892.28469119 4747439.1037472645 4474009.471838858 0.8045339102511334 0.7141652436830014 0.8816216803002094 0.8216035609825043 0.8427878190062196 0.8678155440239046 0.9830293950637791 1.0022089387415334 1.061115121375911 1.0 22.093136880026186 -6.676757928440434 1.0733009110797596 1.0367178376020427 0.7996766071661515 0.8378451479575421 0.04178911194065748 0.19563309272907184 0.4538667224285739 0.02861874531946494 0.017530707127055026 2.1049513924637293e-07 6.676757928440434 -0.2370412304358912 IPSKEEEADMSS(ph)PTQR ddPTM_KYSE-520_SHP099_60min_R1 10 IPSKEEEADMSSPTQR 16 1 E9PDI4;O00515 E9PDI4 LAD1 Ladinin-1 1 IPSKEEEADMS(0.118)S(0.854)PT(0.028)QR;IPSKEEEADMS(0.173)S(0.807)PT(0.02)QR;IPSKEEEADMS(0.04)S(0.959)PT(0.001)QR;IPSKEEEADMS(0.004)S(0.994)PT(0.002)QR;IPSKEEEADMS(0.032)S(0.968)PTQR;IPSKEEEADMS(0.002)S(0.994)PT(0.004)QR;IPSKEEEADMS(0.032)S(0.959)PT(0.009)QR;IPSKEEEADMS(0.166)S(0.834)PTQR;IPSKEEEADMS(0.013)S(0.978)PT(0.009)QR;IPSKEEEADMS(0.16)S(0.838)PT(0.002)QR 282.03 5.1952999999999995e-37 37308240000.0 11402340.0 10257090.0 10264900.0 9724370.0 10020090.0 11033940.0 11746690.0 12860840.0 15963770.0 12099890.0 True False 10769829.470198737 9764324.000194034 10926591.8784207 10648571.20106156 10808614.076486668 10965073.087627782 12934160.061846653 12816228.747782633 13065151.781893145 11992694.388171975 0.8980325122618558 0.8141893459591771 0.9111040042175393 0.8879215009067452 0.9012665316600472 0.9143127251239134 1.0785032656717424 1.068669669463343 1.0894258920479873 1.0 23.51565248841459 -6.693206941661743 4.260694489793165 1.0655602491213774 0.8830554124677125 0.8608889060604408 0.03383474202819258 0.07216878683656917 2.554828314747238 0.013615561729873688 0.010109322660454004 2.0267167572719503e-07 6.693206941661743 -0.1825048366536649 IPSKEEEADMSSPT(ph)QR ddPTM_KYSE-520_SHP099_60min_R1 1 IPSKEEEADMSSPTQR 16 1 E9PDI4;O00515 E9PDI4 LAD1 Ladinin-1 1 IPSKEEEADMS(0.011)S(0.28)PT(0.709)QR 101.53 0.0019071 3226400000.0 740490.0 666360.0 654940.0 639670.0 652390.0 715480.0 780170.0 892210.0 1009100.0 810940.0 True False 699413.5435697824 634347.0653732478 697158.4803410504 700464.0444762021 703729.3814086639 711014.423926169 859037.1973254518 889115.1317533803 825872.8773409016 803755.7025017728 0.8701817497440894 0.7892286964792622 0.8673760922268701 0.8714887400436915 0.8755513388187897 0.8846150910196507 1.068778976810503 1.106200713706811 1.0275172851281638 1.0 19.61639754257487 -6.713738766933171 4.62506416075951 1.0604084606977455 0.8555949549463567 0.8744016769330029 0.03545918349504952 0.06472582369233784 2.958119096683983 0.014551190386369857 0.010770471085656787 1.9331307674958886e-07 6.713738766933171 -0.2048135057513888 IPSLGWS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 2 IPSLGWSPSK 10 0 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 IPS(0.005)LGWS(0.972)PS(0.023)K;IPSLGWS(0.996)PS(0.004)K 88.98700000000001 0.0038316 746855000.0 1147030.0 994370.0 773030.0 729400.0 804800.0 902160.0 761050.0 857160.0 983700.0 830350.0 True False 1083401.9593523827 946598.9726202012 822860.7506917311 798721.9566978932 868133.181314386 896529.2848007389 837984.3611322341 854186.7120226475 805084.8770590072 822993.7450025245 1.3164157880070637 1.1501897534072967 0.9998384017963673 0.9705079310116059 1.0548478485844666 1.0893512742286868 1.0182147388370049 1.0379018275771068 0.97823936323664 1.0 19.650521940213565 -4.437261380686565 2.5383085876752776 1.0221805151077947 1.3306437365427906 0.8755818213052282 0.03507747105122062 0.12331011393554157 1.2777905226589168 0.009978905060716704 0.06837829718203571 3.653748241230766e-05 4.437261380686565 0.3084632214349958 IPVEGPLS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 5 IPVEGPLSPSR 11 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 IPVEGPLS(0.5)PS(0.5)R;IPVEGPLS(0.964)PS(0.036)R;IPVEGPLS(0.876)PS(0.124)R;IPVEGPLS(0.992)PS(0.008)R;IPVEGPLS(0.5)PS(0.5)R 146.5 7.0779e-05 2724430000.0 1258080.0 1116940.0 1003690.0 753230.0 1022060.0 1113440.0 1070100.0 1193360.0 1262470.0 1247890.0 True False 1188291.794479696 1063280.5258388799 1068389.4633607818 824816.7527331429 1102490.3072740831 1106490.6079504043 1178276.1511695732 1189220.512692317 1033237.272278831 1236834.665443729 0.9607523363305657 0.8596787877524564 0.8638094429359194 0.6668771306124657 0.8913805038594644 0.8946148089675655 0.9526545334552479 0.9615032194021422 0.8353883515288966 1.0 20.238221229471645 -6.203201025887986 3.190330535045757 0.9298604833226092 0.8368724814915621 0.21488413501865944 0.07951002786470508 0.4128517306119755 8.376500665111642 0.02904568987253482 0.028158028428682563 6.263238852577111e-07 6.203201025887986 -0.09298800183104705 IPVEGPLS(ph)PSRGDFPK ddPTM_KYSE-520_SHP099_60min_R1 2 IPVEGPLSPSRGDFPK 16 1 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 IPVEGPLS(0.976)PS(0.024)RGDFPK;IPVEGPLS(0.973)PS(0.027)RGDFPK 153.36 3.1692e-06 1473380000.0 1247130.0 1166830.0 990430.0 757670.0 789220.0 1143440.0 821950.0 947260.0 1511670.0 1064660.0 True False 1177949.2128079804 1110773.7353524622 1054274.7025440314 829678.7289982083 851327.1239524616 1136303.366822468 905040.7274589562 943974.176152146 1237188.8340996134 1055227.9406929452 1.1162983535428819 1.0526386693504735 0.9990966519060444 0.7862554591317743 0.8067708322747914 1.076832144983085 0.8576732026870286 0.8945689739150186 1.1724375240549245 1.0 20.009123239713794 -4.804707087033133 3.009095806934364 0.9324071315313864 1.094842882215339 0.19335577934026427 0.11385221535158113 0.3823435806127896 6.934549855662368 0.031166049678752864 0.08607643229836068 1.5678081328149088e-05 4.804707087033133 0.16243575068395266 IPVEGPLSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 IPVEGPLSPSR 11 0 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 IPVEGPLS(0.398)PS(0.602)R 96.551 0.0020971999999999996 649960000.0 195610.0 208360.0 168160.0 129430.0 160760.0 206850.0 182590.0 200180.0 237890.0 191750.0 True False 184759.1233611324 198350.07284526402 178999.86266551292 141730.9882854516 173410.8974007219 205558.9724228883 201047.97910667412 199485.6223023634 194695.17271888535 190051.2441792428 0.972154242709828 1.0436662685469944 0.9418505174146241 0.7457514361325676 0.9124428421903573 1.0815976149517847 1.0578619465235384 1.0496412331519531 1.0244351388474084 1.0 17.536028944337286 -6.253817124765505 24.135982662474532 1.046756937152876 0.9210479987654631 0.40231285983762866 0.07274115625346164 414.1873009506012 1311530.063676029 0.02712825910519642 0.026616685288163182 5.574204213376811e-07 6.253817124765505 -0.12570893838741293 IPVLS(ph)PKPAVAPPAPPSSSQLCR ddPTM_KYSE-520_SHP099_60min_R1 2 IPVLSPKPAVAPPAPPSSSQLCR 23 1 Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4;G3V411;Q6PJT7-8 Q6PJT7-5 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 IPVLS(1)PKPAVAPPAPPSSSQLCR;IPVLS(1)PKPAVAPPAPPSSSQLCR 85.48899999999999 0.002693 1668660000.0 1263480.0 1316380.0 903530.0 1066860.0 897610.0 1392830.0 1062310.0 1475920.0 1365540.0 1482260.0 True False 1193392.2457150628 1253139.128873336 961772.9894991138 1168254.0536368461 968246.8002977215 1384136.8313259454 1169698.6619464979 1470800.3780023179 1117592.3584620887 1469128.3295808316 0.8123131394896992 0.852981392871839 0.6546555328992428 0.7952021822151981 0.659062098798394 0.9421483497774931 0.7961854920327033 1.0011381227819378 0.7607179958070496 1.0 20.48652899133378 -6.274617480554306 24.94391344960389 0.8936183451485832 0.7569712271490723 0.37844415252212416 0.09283608148045183 857.7500827230017 1623570.878371765 0.030981577525879583 0.027484650924629574 5.313522445140196e-07 6.274617480554306 -0.1366471179995109 IPVLS(ph)PKPVAPPAPPSSSQLCR ddPTM_KYSE-520_SHP099_60min_R1 2 IPVLSPKPVAPPAPPSSSQLCR 22 1 H0YJA2;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-11;Q6PJT7-6 H0YJA2 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 IPVLS(1)PKPVAPPAPPSSSQLCR;IPVLS(1)PKPVAPPAPPSSSQLCR 81.34100000000001 0.004326300000000001 829900000.0 903820.0 941510.0 649000.0 678550.0 692410.0 929880.0 820990.0 936640.0 980850.0 989340.0 True False 853683.3028794989 896278.4463646775 690835.5784367144 743039.1879865037 746898.7277260128 924076.2739985269 903983.68129026 933391.0144534183 802752.3652163533 980575.2172948718 0.8705944101203867 0.9140333454859841 0.7045207407367823 0.7577584818391979 0.7616944774379409 0.9423818363957744 0.9218912178752529 0.9518810979420618 0.8186545519995079 1.0 19.903268774365937 -6.267026142038181 24.98200969781817 0.9236374061203872 0.8001176065192153 0.4473592998758865 0.06953986392343564 481.6345854508761 2153691.750517999 0.025406477056933836 0.023032900539744754 5.407217736149107e-07 6.267026142038181 -0.12351979960117199 IPYQS(ph)PVSSSESAPGTIMNGHGGGR ddPTM_KYSE-520_SHP099_60min_R1 1 IPYQSPVSSSESAPGTIMNGHGGGR 25 0 Q5T6F2;H0YDN2 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 1 IPYQS(0.974)PVS(0.006)S(0.01)S(0.01)ESAPGTIMNGHGGGR 127.92 6.8483e-05 656710000.0 217450.0 305440.0 242940.0 224100.0 176210.0 231690.0 196210.0 227170.0 249050.0 237990.0 True False 205387.6150241718 290766.2039252133 258600.30111774363 245398.396621878 190076.72450224677 230243.93676895835 216044.82162506468 226382.00029187655 203828.79803959103 235881.59375341804 0.8707233648712602 1.2326786473605467 1.0963140319802778 1.040345678172789 0.8058141437731084 0.9760996316213079 0.9159036878939779 0.9597272796474657 0.8641148925450545 1.0 17.84770332143009 -5.570727179426853 9.817784282811688 0.9208476818819878 1.0807433533172046 0.3305184376739104 0.09733586064010094 0.39992729812648337 78.88382005330891 0.027358686238774008 0.035358980016247245 2.6870318890911134e-06 5.570727179426853 0.15989567143521677 IQALGLHLPDPPLES(ph)EDEDEEGATALNNHSSIPMDPEHVELVK ddPTM_KYSE-520_SHP099_60min_R1 1 IQALGLHLPDPPLESEDEDEEGATALNNHSSIPMDPEHVELVK 43 0 A0A2R8Y7W8;A0A2R8Y6W5;Q16626 A0A2R8Y7W8 MEA1 Male-enhanced antigen 1 1 IQALGLHLPDPPLES(0.956)EDEDEEGAT(0.043)ALNNHS(0.001)S(0.001)IPMDPEHVELVK 191.08 2.4998e-16 231670000.0 78474.0 106230.0 165460.0 90766.0 75923.0 113270.0 68816.0 81720.0 89462.0 117590.0 True False 74120.89078595935 101126.55134551915 176125.8163453603 99392.3733502069 81897.70815722189 112563.0399146268 75772.59285943872 81436.53239359129 73217.95595349497 116548.24408363576 0.635967460245645 0.8676797504812694 1.5111837825627927 0.8528002642311994 0.7026936252977914 0.9658063988836318 0.6501392917173753 0.6987366736743963 0.6282201549167339 1.0 16.830567743417415 -5.511547511230391 24.91641417305687 0.7639529054418607 1.0230130462983091 0.16052898063906396 0.23411305482793135 877.2158922481963 1928923.672448525 0.06901868764474436 0.09587411302035487 3.0793034514319324e-06 5.511547511230391 0.25906014085644846 IQDPTEDAEAEDT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 IQDPTEDAEAEDTPR 15 0 O96028-5;O96028-3;O96028;H0Y9L4 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 IQDPTEDAEAEDT(1)PR 164.01 0.0012009 0.0 355210.0 304080.0 282460.0 204250.0 246240.0 273810.0 242390.0 279640.0 351870.0 294760.0 True False 335505.7932064203 289471.5403666149 300667.82355197915 223661.8585899982 265617.6870860518 272101.05022533756 266893.14669843257 278669.9941084666 287979.27792086324 292148.65571981005 1.1484077939013098 0.9908364618464557 1.029160386896798 0.7655755185281591 0.9091867509422901 0.9313787515294971 0.9135525407120162 0.9538636877238608 0.9857285744181362 1.0 18.156343125380467 -4.30524541524521 1.4961571522769623 0.9237850315148793 1.2159401481774774 0.48511273074698624 0.06685758444613404 0.8880649646449328 1.9722008315798631 0.01938716418490929 0.3758986721617692 4.951702962017159e-05 4.30524541524521 0.2921551166625981 IQDSDEPDLSQNS(ph)ITGEHSQLLDDGHKK ddPTM_KYSE-520_SHP099_60min_R1 1 IQDSDEPDLSQNSITGEHSQLLDDGHKK 28 1 Q9UHW9-2 Q9UHW9-2 1 IQDSDEPDLS(0.006)QNS(0.969)IT(0.019)GEHS(0.006)QLLDDGHKK 70.07300000000001 0.012654 224890000.0 104820.0 94982.0 84882.0 90432.0 78743.0 82196.0 73253.0 96777.0 112700.0 86864.0 True False 99005.42564651041 90418.92214911147 90353.6295360019 99026.63009062783 84939.62611361676 81682.98427494193 80658.12812038556 96441.3031749217 92236.52093580381 86094.45253916945 1.1499628922254543 1.0502293641738947 1.0494709806638784 1.1502091850293696 0.986586517580476 0.948760133386986 0.9368562751901979 1.1201802245161483 1.071341047134715 1.0 16.39363266070155 -1.0000000253902428 0.5390397665680361 1.0211220372118979 5.9908515787128 0.2420026799554993 0.0644826640563595 214.00895729708384 2.0326377153315693 0.03572623674481072 1225.7536445017865 0.09999999415368072 1.0000000253902428 4.969729541500902 IQEIIEQLDVTTSEYEK ddPTM_KYSE-520_SHP099_60min_R1 1 IQEIIEQLDVTTSEYEK 17 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 155.98 1.3197000000000001e-05 20868000.0 90104.0 106070.0 122280.0 136520.0 109730.0 94479.0 97798.0 102990.0 152530.0 99875.0 False True 85105.7515021291 100974.23798568409 130162.3644549177 149494.81975376516 118365.12672170445 93889.32151579435 107684.3762565011 102632.7517280466 124834.39696839538 98990.1852015742 0.8597392895955073 1.0200429242562759 1.314901716668854 1.510198404512004 1.1957258841437357 0.948471015834621 1.0878288189604137 1.0367972493339115 1.2610785272721177 1.0 16.594997869762327 -6.132754560107553 14.77421606908854 1.070455760136494 1.1972062298179242 0.08851681427891511 0.17739876462090604 2.766431203672913 312.5084267321001 0.06418618625979065 0.06418859922488816 7.366232797568043e-07 6.132754560107553 0.12675046968143033 IQEIIEQLDVTTSEYEKEK ddPTM_KYSE-520_SHP099_60min_R1 6 IQEIIEQLDVTTSEYEKEK 19 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ;;;;; 218.88 1.15e-18 2683468000.0 581628.6 565199.0 418243.0 723663.0 461748.0 435987.0 469948.0 502594.0 531814.0 295007.0 False True 549364.502110131 538045.9916590052 445203.61299246055 792439.7139427847 498084.94061326544 433265.84341183415 517454.93009049445 500850.618720321 435249.98353996006 292393.46749197296 1.8788535421887036 1.8401436813008694 1.5226181925719071 2.710182688895194 1.703474926733578 1.4817904350880498 1.7697212407958467 1.7129336815093885 1.4885762916434133 1.0 18.15755155411905 -5.989135527301789 24.97738018860707 1.5570546239906011 1.9769883155214125 0.31198368809368315 0.34096514340229306 306.8177255811164 705367.8463479597 0.10461883424509555 0.11852264873632809 1.0253319080213832e-06 5.989135527301789 0.4199336915308114 IQELEDLLAK ddPTM_KYSE-520_SHP099_60min_R1 1 IQELEDLLAK 10 0 P20700;E9PBF6 P20700 LMNB1 Lamin-B1 0 99.28299999999999 0.017026 46031000.0 139200.0 150690.0 210730.0 221290.0 210770.0 160640.0 169550.0 215280.0 239100.0 103000.0 False True 131478.29851167966 143450.62620969853 224313.99297992146 242321.33506673542 227356.39988274497 159637.38617361768 186689.76864853862 214533.24392672983 195685.46722050276 102087.50013278742 1.287898110353011 1.405173268256243 2.197271876460403 2.3736631296832895 2.2270738296756956 1.563730975545232 1.8287230895624558 2.1014643677990135 1.9168406216820908 1.0 16.63944670401757 -10.054488555460942 5.344067838263501 0.999998573808925 1.8941946571225825 0.3662745435387763 0.3458696467879311 3.570250394563505e-05 6.317406938375919e-06 0.36648638853162446 0.08888521809929092 8.820870466103337e-11 10.054488555460942 0.8941960833136575 IQEQES(ph)S(ph)GEEDSDLSPEER ddPTM_KYSE-520_SHP099_60min_R1 4 IQEQESSGEEDSDLSPEER 19 0 E7EMN6;Q6NXS1;P41236 E7EMN6 PPP1R2;PPP1R2P3 Protein phosphatase inhibitor 2-like protein 3;Protein phosphatase inhibitor 2 2 IQEQES(1)S(1)GEEDSDLSPEER;IQEQES(1)S(0.999)GEEDS(0.001)DLSPEER;IQEQES(1)S(1)GEEDSDLSPEER;IQEQES(1)S(1)GEEDSDLSPEER 257.73 5.451e-35 2221790000.0 2774670.0 2548910.0 2445270.0 2387870.0 2371530.0 2373190.0 2303090.0 2403930.0 2837210.0 2429800.0 True False 2620753.5239324826 2426456.537608087 2602896.0167703303 2614812.4468607036 2558155.9188400935 2358378.0409198683 2535908.813192346 2395591.327911481 2322044.1842437596 2408273.8623557976 1.088229027810332 1.0075500861992925 1.0808139628373292 1.0857620836788338 1.062236300790841 0.9792815002413717 1.0529985201565468 0.9947337656889609 0.9641944051879187 1.0 21.19956803010821 -6.246925643130345 23.788650815498702 1.0013348054854496 1.0637722610569786 0.5481863219973695 0.030192135407406742 363.5386588989186 595855.7691262272 0.010139019543649897 0.010083101588087612 5.663362448765769e-07 6.246925643130345 0.06243745557152902 IQES(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 2 IQESPGK 7 0 P49736;H0Y8E6 P49736 MCM2 DNA replication licensing factor MCM2 1 IQES(1)PGK;IQES(1)PGK 80.688 0.014266 1583550000.0 3428000.0 3143700.0 2617600.0 2842900.0 2982000.0 3252700.0 2886800.0 3072100.0 3548900.0 3195500.0 True False 3237842.0064514196 2992671.9332100973 2786334.6843080805 3113088.361250947 3216666.434740933 3232398.692772198 3178625.9164529666 3061443.60213353 2904509.220488679 3167190.356061383 1.022307358398848 0.944898031620584 0.8797496743369342 0.9829179844820836 1.0156214414409486 1.020588701460908 1.0036106324868344 0.966611809825237 0.9170617784087453 1.0 21.594772148876178 -4.240746941473329 23.048356590934294 0.9706962645512265 1.022307506151453 0.11727285824222833 0.04292916788191694 4424.805465085168 4928364.801854402 0.01179281725336994 0.43494217939866897 5.744510909174117e-05 4.240746941473329 0.051611241600226565 IQESEVFRVTS(ph)TEFISLRIDSSDEDR ddPTM_KYSE-520_SHP099_60min_R1 3 IQESEVFRVTSTEFISLRIDSSDEDR 26 2 A0A0D9SGJ6;J3KQV8;O43426;J3KPK1;C9JFZ1;O43426-4;O43426-2;C9J1Z6;C9JW66;O43426-5 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 IQES(0.021)EVFRVT(0.021)S(0.27)T(0.27)EFIS(0.27)LRIDS(0.074)S(0.074)DEDR;IQES(0.08)EVFRVT(0.08)S(0.248)T(0.248)EFIS(0.248)LRIDS(0.047)S(0.047)DEDR;IQES(0.057)EVFRVT(0.057)S(0.243)T(0.243)EFIS(0.243)LRIDS(0.079)S(0.079)DEDR 57.919 0.030115 13139800000.0 1060210.0 850010.0 792470.0 924780.0 865360.0 926200.0 1008270.0 1070220.0 1330690.0 992450.0 True False 1001398.0378237625 809174.2437089784 843553.8841968313 1012670.8131547538 933458.9087751213 920419.2422435537 1110195.771366922 1066507.656611225 1089070.2399650812 983657.6651144164 1.0180351084920205 0.8226177382706182 0.8575685567383967 1.0294951679525242 0.9489672493596072 0.9357109438439573 1.1286403905954283 1.084226448321502 1.1071638829128663 1.0 19.907796787182956 -6.750889553317334 24.94697710625121 1.0870265476375942 0.9316287407726319 0.5289197657737326 0.06666947260700778 155.65182173973275 368067.59280213696 0.0262356253085999 0.02010694550101538 1.7746407375134793e-07 6.750889553317334 -0.1553978068649623 IQFKPDDGIS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 5 IQFKPDDGISPER 13 1 Q96I24 Q96I24 FUBP3 Far upstream element-binding protein 3 1 IQFKPDDGIS(1)PER;IQFKPDDGIS(1)PER;IQFKPDDGIS(1)PER;IQFKPDDGIS(1)PER;IQFKPDDGIS(1)PER 160.63 1.7295e-06 1797210000.0 2790840.0 2576130.0 2416760.0 2309220.0 2438220.0 2511170.0 2388790.0 2458400.0 2937230.0 2518050.0 True False 2636026.541798392 2452368.847950037 2572548.216552717 2528687.574507689 2630094.042425904 2495496.8565587834 2630272.2055437467 2449872.3841948737 2403903.073542775 2495742.036013254 1.056209537588761 0.982621125325716 1.0307748875609575 1.0132006986375335 1.0538324892853375 0.9999017608987898 1.0539038761174988 0.9816208361455284 0.9632017407467384 1.0 21.251037391906767 -7.353545489139657 8.338716801507635 0.9788527907175569 1.0250328087330982 0.42094799282557593 0.024360837459553617 0.30710904527561533 25.290572898653117 0.012459817639271863 0.005952440695023682 4.4305180565420376e-08 7.353545489139657 0.04618001801554128 IQIISTDSAVAS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 1 IQIISTDSAVASPQR 15 0 C9JMI6;C9JKS0;P49116;P49116-2;C9J2Y1 C9JMI6 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 IQIISTDSAVAS(1)PQR 120.24 0.0001255 398190000.0 392720.0 408550.0 326890.0 267640.0 286770.0 356710.0 346870.0 377830.0 469520.0 398080.0 True False 370935.03873208934 388922.64475394785 347961.8524424929 293076.4251311001 309337.1675018972 354483.64057514374 381935.0047249689 376519.39591618476 384267.00363601267 394553.3209015531 0.9401391879923959 0.9857289855405623 0.8819133790266958 0.7428056224730828 0.7840186639287758 0.8984429272199502 0.9680187302751594 0.9542928064978369 0.973929208751719 1.0 18.589860757190227 -6.671756608873633 3.988109082300311 0.9707828954279808 0.8654201050847505 0.37082090845375026 0.06580286933540712 0.2977506191004258 8.925197719530555 0.03112477682345224 0.023182111561026064 2.1293320506163593e-07 6.671756608873633 -0.10536279034323026 IQILEGWKK ddPTM_KYSE-520_SHP099_60min_R1 1 IQILEGWKK 9 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 129.16 0.0072486 0.0 2121900.0 2275500.0 1496300.0 1057500.0 2114200.0 1669900.0 1057000.0 794470.0 1539900.0 851510.0 False True 2004193.9770972207 2166181.564404868 1592753.892164647 1158004.482051031 2280575.511847513 1659477.534682048 1163851.8753258935 791714.1690006914 1260292.9777200022 843966.2838647558 2.374732279492802 2.566668367941574 1.8872245522309081 1.3720980377891485 2.7022116350479366 1.966284158986589 1.379026505651734 0.9380874380137706 1.4932977795614903 1.0 19.686825839396857 -6.777582918198115 3.3238395155183413 1.1640354722745725 2.155925156967081 0.6104047843987168 0.3742117228245004 0.17578162658799898 4.04022638747509 0.17093014705033904 0.11682938093992393 1.6688491497539172e-07 6.777582918198115 0.9918896846925085 IQIVTAVDASGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 IQIVTAVDASGSPK 14 0 C9JMI6;C9JKS0;P49116;P49116-2 C9JMI6 NR2C2 Nuclear receptor subfamily 2 group C member 2 1 IQIVTAVDAS(0.019)GS(0.981)PK;IQIVTAVDAS(0.018)GS(0.982)PK 149.73 2.8958e-06 765110000.0 430710.0 478630.0 399510.0 281940.0 323640.0 370590.0 350410.0 486980.0 514370.0 463820.0 True False 406817.65770090185 455635.89636172284 425263.05383860134 308735.4928316477 349108.6267402938 368277.010346619 385832.8624720397 485290.7800419867 420973.37421250535 459710.91564649984 0.884942349321392 0.9911356917008459 0.9250662522131896 0.6715861693157043 0.7594090435058215 0.8011056466403551 0.8392945421568594 1.055643369615258 0.9157349975483676 1.0 18.810367397198245 -7.243327404047409 23.271412899579538 0.9892668712636833 0.8371508148962655 0.38063866079656106 0.0885504165413915 378.14021714902213 485859.66178386536 0.0470080272390345 0.027047723899532573 5.7104797517964994e-08 7.243327404047409 -0.15211605636741776 IQNS(ph)DDEER ddPTM_KYSE-520_SHP099_60min_R1 2 IQNSDDEER 9 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 IQNS(1)DDEER;IQNS(1)DDEER 161.48 5.0621e-05 1104510000.0 1359190.0 1145500.0 1104840.0 1256110.0 1156150.0 1251690.0 1206190.0 1271350.0 1241630.0 1143770.0 True False 1283793.0212219076 1090468.4605694457 1176059.7542065023 1375490.316736757 1247132.427406347 1243877.7384191703 1328123.45647998 1266939.9835853202 1016181.2909451812 1133637.0876395938 1.1324550292324693 0.9619202410181977 1.0374217349003985 1.2133427282277247 1.100116113881796 1.097245098966473 1.1715596384071525 1.1175886863610678 0.8963903016449704 1.0 20.112527432126818 -7.753000686659016 24.998130434103427 0.9481951406569838 1.1025517939010236 0.449206103736677 0.06897664884071476 156.2954734170116 463007.3438875692 0.05081661324958535 0.018510543799981276 1.766035028422196e-08 7.753000686659016 0.1543566532440398 IQNTGDY(ph)YDLYGGEK ddPTM_KYSE-520_SHP099_60min_R1 3 IQNTGDYYDLYGGEK 15 0 Q06124;Q06124-1;A0A1W2PPU4;Q06124-3 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 1 IQNTGDY(0.762)Y(0.238)DLYGGEK;IQNTGDY(0.5)Y(0.5)DLYGGEK;IQNT(0.004)GDY(0.907)Y(0.089)DLYGGEK 329.46 1.4609e-59 1206490000.0 1608670.0 1512380.0 1243620.0 1268080.0 1349020.0 1353860.0 1301790.0 1366460.0 1733610.0 1372310.0 True False 1519433.8682958581 1439722.9946713375 1323785.7350623524 1388597.941937847 1455180.1991261598 1345410.057551132 1433387.637446069 1361720.0691941625 1418830.124751718 1360152.4010410241 1.1171056031169186 1.0585012338098378 0.9732628005870242 1.020913495337031 1.0698655518399292 0.9891612561367324 1.0538434048633025 1.0011525680151272 1.0431405507690046 1.0 20.37533687955557 -4.4239738441664915 3.7428514470462773 1.0207253123847004 1.1147147207621804 0.5244989772465243 0.02873032040731374 0.18450277746625773 4.335389984816217 0.007017858344084358 0.03497904953352404 3.7672648704228485e-05 4.4239738441664915 0.09398940837747993 IQNWHEEHR ddPTM_KYSE-520_SHP099_60min_R1 9 IQNWHEEHR 9 0 A0A2R8Y7M3;A0A2R8Y5S7;P35241;P35241-5;P35241-4 A0A2R8Y7M3 RDX Radixin 0 ;;;;;;;; 155.84 0.00021587 22641550000.0 4469880.0 3790890.0 2913420.0 3143030.0 4490420.0 3868660.0 3183150.0 3450180.0 3471010.0 2615770.0 False True 4221926.84591513 3608769.9541581008 3101223.714836815 3441742.626213571 4843790.507005156 3844514.2579334397 3504933.8665502532 3438212.130858064 2840762.081041561 2592596.3128382647 1.628455160955291 1.391952127790914 1.1961845735411567 1.3275273937444187 1.8683165146147953 1.482881943052919 1.3519011228991527 1.3261656332042127 1.0957209446663199 1.0 21.30596615430218 -7.666052463265846 1.46165452780725 0.9982136010286489 1.4684983094457722 0.48843047190999056 0.1714551829873041 0.37605207213350084 1.5149273105021661 0.17281667499030684 0.05443484186192644 2.1574837669247025e-08 7.666052463265846 0.47028470841712333 IQPAGNT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 IQPAGNTSPR 10 0 P49674;H0Y5S9;H0Y682 P49674 CSNK1E Casein kinase I isoform epsilon 1 IQPAGNT(0.918)S(0.082)PR 87.001 0.019528 3019100000.0 3185200.0 2926100.0 2792700.0 2427600.0 2379000.0 2546100.0 2341400.0 2546700.0 3110300.0 2783500.0 True False 3008510.6064612186 2785525.76383436 2972721.910477985 2658318.374115448 2566213.76534161 2530208.8454721617 2578091.5618619192 2537866.0921042515 2545547.924282437 2758840.355530228 1.0904982596874497 1.0096726902847568 1.0775258903687637 0.9635636831202361 0.9301784208707515 0.9171276766342193 0.9344837792784968 0.9199032075259364 0.9226876499684964 1.0 21.395630544700182 -5.399277461931124 3.841969457983932 0.9329975205604603 1.054080859478809 0.7652937886261822 0.030082463065041826 0.10320891661352062 2.664938131134511 0.008164100367302158 0.01245046427467922 3.987700548667577e-06 5.399277461931124 0.12108333891834866 IQPAGNTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 IQPAGNTSPR 10 0 P49674;H0Y5S9;H0Y682 P49674 CSNK1E Casein kinase I isoform epsilon 1 IQPAGNT(0.071)S(0.929)PR;IQPAGNT(0.006)S(0.994)PR;IQPAGNT(0.258)S(0.742)PR;IQPAGNT(0.007)S(0.993)PR;IQPAGNT(0.242)S(0.758)PR 112.73 0.0006408 6382810000.0 10468900.0 10676810.0 9703110.0 8567570.0 8978130.0 9864830.0 8628230.0 9123210.0 11897280.0 9605590.0 True False 9888169.247765252 10163880.021381458 10328587.996124918 9381829.276866153 9684657.752428107 9803259.936797112 9500455.69180997 9091563.71388321 9737033.858022355 9520491.94563593 1.0386195696849323 1.067579288908537 1.0848796527641 0.9854353462445459 1.0172434163832709 1.0297009852826775 0.9978954602408815 0.9549468415915908 1.0227448238623515 1.0 23.18260469214231 -5.264335136517831 24.99972243756775 1.0009869709741084 1.0640814833681134 0.6204116584794435 0.02242177012842133 166.4544591265663 1437046.242254728 0.006519082648611701 0.010163499585901632 5.440826329260601e-06 5.264335136517831 0.06309451239400499 IQPQPPDEDGDHS(ph)DKEDEQPQVVVLK ddPTM_KYSE-520_SHP099_60min_R1 12 IQPQPPDEDGDHSDKEDEQPQVVVLK 26 1 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK;IQPQPPDEDGDHS(1)DKEDEQPQVVVLK 290.45 3.6618e-49 59323300000.0 14227400.0 12591920.0 11946350.0 12237320.0 12704550.0 12173930.0 12062840.0 13403980.0 14894150.0 12646640.0 True False 13438177.760381253 11986985.262342757 12716430.83583582 13400351.213515578 13704325.805998614 12097947.987179946 13282269.589173302 13357484.721892443 12189747.810967186 12534600.608537031 1.0720866328384502 0.9563117036356702 1.0145062641385596 1.0690688624246156 1.0933197023178314 0.9651642174334863 1.059648408751616 1.0656490094143856 0.9724879309409369 1.0 23.57941269235286 -5.019009913891887 24.334155172423554 1.0362834961647749 1.0070016292882962 0.019255744236645223 0.047943827398412873 1510.8661162269643 1934034.8570253402 0.012664308879240152 0.02240346035340048 9.57172221120314e-06 5.019009913891887 -0.029281866876478713 IQPQPPDEDGDHS(ph)DKEDEQPQVVVLKK ddPTM_KYSE-520_SHP099_60min_R1 1 IQPQPPDEDGDHSDKEDEQPQVVVLKK 27 2 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 IQPQPPDEDGDHS(1)DKEDEQPQVVVLKK 214.44 1.7436e-22 1364100000.0 890370.0 938070.0 817280.0 643890.0 774570.0 677430.0 705280.0 632760.0 1014700.0 653120.0 True False 840979.4011914089 893003.7091282243 869963.1764942344 705085.1120074124 835524.2522995594 673201.9080900999 776576.5852694849 630565.1032472939 830456.0585054123 647333.8649196706 1.2991432192347425 1.3795102612761339 1.3439172946748126 1.089214005658283 1.2907161166413592 1.0399608989615263 1.1996538839596356 0.9740956520566746 1.2828867814732137 1.0 19.304150454092344 -5.366407308710663 1.1117554546089727 1.111636852891293 1.3632273479874044 0.43215349157597316 0.1080941628615112 0.4966241969632058 1.19913023683114 0.038417399732381105 0.09293586369374694 4.3012302481171676e-06 5.366407308710663 0.2515904950961114 IQPSFQS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 IQPSFQSPVK 10 0 H0Y3G1;Q5TGL8 H0Y3G1 PXDC1 PX domain-containing protein 1 1 IQPSFQS(1)PVK;IQPSFQS(1)PVK 164.48 6.375800000000001e-05 1213460000.0 1804170.0 1754080.0 1417350.0 1177250.0 1304650.0 1768720.0 1363190.0 1679400.0 1865420.0 1812000.0 True False 1704089.0935762702 1669811.363872243 1508714.6488401808 1289135.4860468798 1407318.532556928 1757680.7624066302 1500994.5486523206 1673574.5533749056 1526706.751411421 1795947.0897146696 0.948852615611859 0.9297664577287372 0.8400663123543786 0.7178025975429436 0.7836080141873863 0.9786929539699752 0.8357676889527912 0.9318618365537673 0.8500844819732278 1.0 20.776313416880587 -6.255818335127663 24.998985504564775 0.9098031502766616 0.8415513006033742 0.18471925877925832 0.07770733152367999 985.1747821139434 4381465.658342933 0.02796793431933464 0.02722740592444542 5.548577607723258e-07 6.255818335127663 -0.06825184967328735 IQPSS(ph)PPPNHPNNHLFR ddPTM_KYSE-520_SHP099_60min_R1 4 IQPSSPPPNHPNNHLFR 17 0 H0Y4E8;Q9Y2K2-8;Q9Y2K2-7;Q9Y2K2 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 IQPS(0.018)S(0.982)PPPNHPNNHLFR;IQPS(0.043)S(0.957)PPPNHPNNHLFR;IQPS(0.287)S(0.713)PPPNHPNNHLFR;IQPS(0.07)S(0.93)PPPNHPNNHLFR 123.83 5.3278999999999996e-05 11633800000.0 1539930.0 1404790.0 1235220.0 1407740.0 1371800.0 1361880.0 1208570.0 1537090.0 1726030.0 1354480.0 True False 1454507.0131256522 1337301.7797672218 1314844.257621878 1541531.186347534 1479752.8555256927 1353380.001756263 1330744.050106541 1531758.1935495012 1412626.4616754705 1342480.360969496 1.083447516561996 0.9961425274046211 0.9794141470139198 1.1482709402425 1.1022528884199565 1.0081190318336544 0.991257741115498 1.140991137064616 1.0522511187093397 1.0 20.356469552626738 -5.203637199626387 24.999580077619974 1.0655027769777354 1.017315558553369 0.10563930964421453 0.05781812144672406 615.1285860871801 266042.60100549186 0.016143887607463756 0.02796200799141553 6.256951669485881e-06 5.203637199626387 -0.04818721842436635 IQQALTS(ph)PLPMTPILEGSHR ddPTM_KYSE-520_SHP099_60min_R1 1 IQQALTSPLPMTPILEGSHR 20 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 IQQALT(0.256)S(0.744)PLPMTPILEGSHR 95.319 0.00082574 75164000.0 67588.0 99466.0 77033.0 83670.0 84487.0 92716.0 90743.0 92031.0 107420.0 92287.0 True False 63838.75890666231 94687.50405849026 81998.67043715798 91621.97164369727 91135.64623472736 92137.32505274615 99916.18800633625 91711.76594119678 87915.23583783538 91469.40897819964 0.6979246900116881 1.0351822004344382 0.8964600444362895 1.001667909164407 0.9963510998135799 1.0073020705174305 1.0923453985599685 1.0026495958124633 0.9611435869098996 1.0 16.481001708797177 -4.257276253175106 24.996666106393825 0.9992525599825326 0.6979245718597837 0.7873582027769749 0.046975484276275216 193.96347768801758 1164571.6723712103 0.012129548381989798 0.09131706440151627 5.5299823710375516e-05 4.257276253175106 -0.30132798812274886 IQQFDDGGS(ph)DEEDIWEEK ddPTM_KYSE-520_SHP099_60min_R1 2 IQQFDDGGSDEEDIWEEK 18 0 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YEN2;H7BXH2;E9PKF6;Q5H9R7-4;Q5H9R7-6;Q5H9R7-3 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 1 IQQFDDGGS(1)DEEDIWEEK;IQQFDDGGS(1)DEEDIWEEK 225.84 7.8881e-19 480580000.0 902910.0 796600.0 745000.0 773410.0 810430.0 750460.0 810700.0 778550.0 1007950.0 785410.0 True False 852823.7823935392 758330.1402790227 793023.8920421468 846914.6538658037 874206.2302840697 745776.1007709972 892653.4676695367 775849.3917649358 824931.6883517599 778451.8784397331 1.0955382163157872 0.9741515966265754 1.0187192220945251 1.0879473443667347 1.1230061285692559 0.958024665912261 1.1467034667045832 0.9966568432206581 1.0597080066210223 1.0 19.57024833341726 -5.218253298823861 24.69146855744414 1.0558554592553677 1.0239378547730382 0.026751856807006646 0.061347367894159496 1364.0099485528951 779863.9358547358 0.015855847769222962 0.027462941338621268 6.049879174131867e-06 5.218253298823861 -0.0319176044823295 IQQHVGEEAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 IQQHVGEEASPR 12 0 Q8TER5-4;Q8TER5-3;Q8TER5;Q8TER5-2 Q8TER5-4 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 IQQHVGEEAS(1)PR;IQQHVGEEAS(1)PR 167.32 2.5180000000000003e-06 62226000.0 96035.0 90497.0 83736.0 90163.0 84538.0 80375.0 84619.0 94582.0 102072.0 77440.0 True False 90707.74710897377 86149.38828123367 89133.75654233717 98732.06441150562 91190.6596445771 79873.34981140756 93173.11432185584 94253.91711760471 83538.29782572639 76753.9418474084 1.181799200480236 1.1224099532569156 1.1612922332971591 1.286345196547574 1.1880908973492175 1.0406416646352932 1.213919599166513 1.2280009970691455 1.0883909779097172 1.0 16.22795322433422 -6.0861813458641745 24.999999761080133 1.1324172939933441 1.188368623946498 0.16990165885983932 0.07642025134517004 190.45411597787268 55243.99932792074 0.02577013739794525 0.025770139777284453 8.20009066333238e-07 6.0861813458641745 0.05595132995315377 IQRHSSGLRIYDREEK ddPTM_KYSE-520_SHP099_60min_R1 1 IQRHSSGLRIYDREEK 16 3 H7C041;Q56UN5-3;Q56UN5 H7C041 MAP3K19 Mitogen-activated protein kinase kinase kinase 19 0 45.33 0.056425 491520000.0 390680.0 371040.0 236730.0 208730.0 393570.0 368440.0 287590.0 394830.0 365250.0 315040.0 False True 369008.201598728 353214.6814576056 251989.99458139238 228567.6364430373 424541.7198930207 366140.4292941212 316662.4038079218 393460.4268840149 298929.8072032148 312248.99069741124 1.1817754823627917 1.1311955906364888 0.8070162020974678 0.7320044043458049 1.3596255954096201 1.1725912339263065 1.0141342750240863 1.2600855042164176 0.9573443505311325 1.0 18.25233738296118 -5.763277853104252 24.999969376849805 1.136907657389278 0.9638705219038709 0.18341382830949604 0.16910203037726018 87.37738313595226 1188182.9759042822 0.05386882886196681 0.06425334941681887 1.724734087839694e-06 5.763277853104252 -0.1730371354854071 IQS(ph)GLGALSR ddPTM_KYSE-520_SHP099_60min_R1 8 IQSGLGALSR 10 0 E9PIE3;Q969G5 E9PIE3 PRKCDBP Protein kinase C delta-binding protein 1 IQS(1)GLGALSR;IQS(1)GLGALSR;IQS(1)GLGALSR;IQS(1)GLGALSR;IQS(1)GLGALSR;IQS(1)GLGALSR;IQS(1)GLGALSR;IQS(1)GLGALSR 178.22 2.0235e-05 4860720000.0 4702850.0 4361260.0 4349340.0 3942570.0 4364110.0 4207290.0 4185190.0 4282570.0 4971230.0 4536060.0 True False 4441973.535600953 4151738.523215283 4629705.415590053 4317270.667423104 4707540.628610745 4181030.742495014 4608269.848718232 4267714.764229348 4068579.9465101645 4495874.037401281 0.9880111183382966 0.9234552589055817 1.0297675995980817 0.9602739381725618 1.047080187177978 0.9299706147709925 1.0249997687617418 0.949251408897609 0.9049586159806865 1.0 22.100170184918106 -9.4647049649124 5.610658915726292 0.9999999958681333 0.9746501271169725 0.02869351959093358 0.04617737722044655 27974560.128532473 0.5925172225065305 0.04806891880567408 0.01068198183841855 3.4300072269098563e-10 9.4647049649124 -0.025349868751160742 IQS(ph)IKEEK ddPTM_KYSE-520_SHP099_60min_R1 3 IQSIKEEK 8 1 M0R0P8;Q13459-2;Q13459;M0R300;M0R240;M0QXP0;M0R332 M0R0P8 MYO9B Unconventional myosin-IXb 1 IQS(1)IKEEK;IQS(1)IKEEK;IQS(1)IKEEK 93.62299999999999 0.0024927 2445790000.0 3210930.0 2748250.0 2582330.0 2947870.0 3044730.0 2854890.0 2842400.0 3366990.0 3363400.0 3233760.0 True False 3032813.3120697387 2616219.944792649 2748791.1236740844 3228034.6784905647 3284332.9288560553 2837071.572542325 3129737.531150728 3355310.6975513734 2752691.3444142146 3205111.402227212 0.946242714048022 0.8162649020482263 0.8576273267019568 1.007152099689085 1.024717245888487 0.8851709711465447 0.9764832289373445 1.046862425817645 0.8588442019523522 1.0 21.611943071768064 -5.252738964868042 24.35607581659875 0.9721218499291914 0.8676669613044334 0.33555310375330305 0.06299615842190079 486.18859241840715 1361039.1853950329 0.016772829619415643 0.028461130164882754 5.588059672756917e-06 5.252738964868042 -0.10445488862475794 IQSSLSSAS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 9 IQSSLSSASPSK 12 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 IQSSLS(0.013)S(0.053)AS(0.935)PSK;IQSSLSS(0.001)AS(0.998)PSK;IQSSLSSAS(1)PSK;IQSSLSSAS(0.996)PS(0.003)K;IQSSLSSAS(1)PSK;IQSSLSSAS(1)PSK;IQSSLSSAS(1)PSK;IQSSLSS(0.001)AS(0.998)PS(0.001)K;IQSSLSSAS(1)PSK 291.66 1.0737999999999999e-29 41657990000.0 26931360.0 29968570.0 22092050.0 18674900.0 19035040.0 27758950.0 20174470.0 25699270.0 28217790.0 26428970.0 True False 25437423.77446484 28528834.91345938 23516138.891529784 20449756.88118657 20532989.353437643 27585696.09639035 22213902.31145313 25610125.230624694 23094150.64859904 26194829.887227546 0.9710856640022688 1.08910174398078 0.8977397063760327 0.7806791252024033 0.7838565641325053 1.0530969742941902 0.8480262100226315 0.9776786236398523 0.8816301059416164 1.0 24.642778757191973 -4.778450859460423 24.721351628686282 0.8968378035835513 1.0300936754465462 0.24863128319923355 0.08799475433634638 243.74443715949903 354214.01196884987 0.02325967799656435 0.048618493786420164 1.6655172708589982e-05 4.778450859460423 0.13325587186299492 IQST(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 3 IQSTPVK 7 0 E7END7;P62820-2;P62820;P62820-3 E7END7 RAB1A Ras-related protein Rab-1A 1 IQS(0.19)T(0.81)PVK;IQS(0.083)T(0.917)PVK;IQS(0.141)T(0.859)PVK 114.86 0.013133 4421500000.0 16296800.0 19437900.0 13783500.0 13965900.0 14151900.0 19637300.0 15298000.0 19613200.0 22350800.0 19914300.0 True False 15392784.017134614 18504074.10711728 14672006.464379773 15293214.936999068 15265574.01670364 19514736.326613415 16844471.13409226 19545166.386955287 18292458.137816865 19737874.795090947 0.7798602522781728 0.9374907024802626 0.7433427669745317 0.7748156828313998 0.7734152828094936 0.988694909112858 0.8534085512732955 0.9902366181700784 0.926769387673207 1.0 24.234463325351403 -6.258345690447187 24.988007737564274 0.9450608494942827 0.8045790646386405 0.5859327078226575 0.06291364432079945 212.55884600266495 1716859.4981084028 0.021188350750033166 0.020349751587047254 5.516381706065023e-07 6.258345690447187 -0.14048178485564222 IQT(ph)SGEPDVAERVDLEELIECATGK ddPTM_KYSE-520_SHP099_60min_R1 2 IQTSGEPDVAERVDLEELIECATGK 25 1 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 1 IQT(0.5)S(0.5)GEPDVAERVDLEELIECATGK;IQT(0.5)S(0.5)GEPDVAERVDLEELIECATGK 133.94 1.1629000000000002e-05 72895000.0 35382.3 37865.0 37332.6 31149.3 31657.2 38000.5 26039.2 33171.0 46807.0 31362.0 True False 33419.573286133615 36045.908563476296 39739.11913027199 34109.720106621455 34148.44153517126 37763.32478393023 28671.49645410216 33055.93754316962 38308.028708448684 31084.157079266803 1.0751320423748771 1.1596231633869523 1.2784364404328037 1.0973345688493097 1.0985802654416625 1.214873695549507 0.9223829483613731 1.063433615358288 1.2323972180027432 1.0 14.923891836853313 -6.721796833278588 24.99971722556895 1.0598385577531724 1.1548142856689 0.21947436296808287 0.09164735428878884 260.64569486799525 164370.0805773567 0.03553792085183822 0.027527087532940003 1.8975934242489893e-07 6.721796833278588 0.09497572791572773 IQTS(ph)GEPDVAERVDLEELIECATGK ddPTM_KYSE-520_SHP099_60min_R1 2 IQTSGEPDVAERVDLEELIECATGK 25 1 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 1 IQT(0.059)S(0.941)GEPDVAERVDLEELIECATGK;IQT(0.031)S(0.969)GEPDVAERVDLEELIECATGK 181.63 1.9067000000000002e-11 60249000.0 26097.2 22767.1 24757.9 20232.2 20425.5 24968.9 17503.0 24184.0 35464.7 20703.9 True False 24649.53629252159 21673.33434188618 26353.833848040584 22155.062204967264 22032.870644802453 24813.059833356823 19272.374052818443 24100.111348588038 29025.204472333633 20520.47955339046 1.2012163862149563 1.056180694291096 1.2842698816795592 1.0796561623876246 1.0737015471532736 1.2091851834552827 0.9391775666194992 1.1744419172019855 1.4144505929705717 1.0 14.324776825953194 -10.714728185164377 2.6462001673850697 0.9735984650025188 1.1503956678700098 0.12229975697083073 0.12595241327962198 16826775.432692196 13253563.184479231 2939276.7921103546 0.030525105910373426 1.9287316838989673e-11 10.714728185164377 0.176797202867491 IQVWHAEHR ddPTM_KYSE-520_SHP099_60min_R1 4 IQVWHAEHR 9 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ;;; 125.74 0.001118 2876120000.0 1515900.0 1263890.0 937410.0 993820.0 1541580.0 1237290.0 1035350.0 1144940.0 1181810.0 959470.0 False True 1431810.0051282689 1203170.8272624328 997836.9485090304 1088272.3539971213 1662893.5756096342 1229567.6141605792 1140013.2820422542 1140968.4703710035 967223.0950056992 950969.8422563646 1.5056313476051097 1.2652039778755457 1.049283483208536 1.144381562526714 1.7486291380850618 1.2929617318286204 1.1987901523116091 1.199794588295071 1.0170912388880498 1.0 19.859040064610912 -7.493466386949646 1.4417574316277841 0.9964814118186368 1.3214282023274349 0.31426849056921813 0.18307608012484794 0.5837418486169048 2.1474613210576883 0.17595732500185665 0.05909896038629856 3.210211255023235e-08 7.493466386949646 0.32494679050879804 IQVWHEEHR ddPTM_KYSE-520_SHP099_60min_R1 9 IQVWHEEHR 9 0 P26038 P26038 MSN Moesin 0 ;;;;;;;; 183.67 7.5522e-06 18303110000.0 8675550.0 7399560.0 5547580.0 5127600.0 8219370.0 7045360.0 5741900.0 5755810.0 6170970.0 5217910.0 False True 8194299.947219835 7044074.03063401 5905185.883241829 5614925.562330842 8866187.657181952 7001387.294896407 6322347.287543744 5735844.43852615 5050477.405494386 5171683.376872551 1.5844550700578923 1.362046652379122 1.1418305129910808 1.0857055920013285 1.714371706673111 1.353792717900361 1.2224931084947874 1.1090865431121504 0.9765635359813035 1.0 22.302202521850834 -7.217632723405163 1.8853010416122573 0.9983022587094458 1.3627458444137746 0.44560757784851956 0.17416525967163993 0.38410239038221416 2.5506192381225676 0.1329994041421136 0.05555879183494473 6.058530193483501e-08 7.217632723405163 0.3644435857043288 IQYQLVDISQDNALRDEMR ddPTM_KYSE-520_SHP099_60min_R1 2 IQYQLVDISQDNALRDEMR 19 1 Q5T123;Q9H299 Q5T123 SH3BGRL3 SH3 domain-binding glutamic acid-rich-like protein 3 0 ; 211.89 1.7501e-18 2563400000.0 1060750.0 815580.0 574340.0 792760.0 923900.0 856880.0 726570.0 807990.0 668640.0 633210.0 False True 1001908.0829473003 776398.3125894617 611362.8753764908 868103.6720480147 996605.673728083 851531.8940765018 800018.786239861 805187.2712762842 547231.8310427313 627600.2520299248 1.5964112182981214 1.237090504789093 0.9741278359896838 1.3832111590780918 1.5879625135659818 1.356806169727127 1.2747266809601523 1.282961994792016 0.8719432939562277 1.0 19.25948640609631 -7.703870613891366 5.584030129194059 0.9362161474519065 1.3325118521687223 0.4719042338997388 0.16985924663639776 0.17165349950691133 10.669678007443114 0.13305269071914455 0.04635385887661862 1.9775587116433343e-08 7.703870613891366 0.39629570471681574 IRAENGTGSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 IRAENGTGSSPR 12 1 M0R102;M0R050;Q9NQT4 M0R102 EXOSC5 Exosome complex component RRP46 1 IRAENGT(0.017)GS(0.114)S(0.869)PR 82.65100000000001 0.0043422 940370000.0 581290.0 603560.0 645540.0 467310.0 480160.0 522110.0 423880.0 391050.0 577170.0 487970.0 True False 549044.6849271137 574564.0716379706 687152.5413005197 511723.0018981258 517945.8602633151 518851.31782312965 466729.9270701415 389693.5388217558 472370.47727167537 483646.96543491475 1.135217884461222 1.187982377024323 1.4207729819675485 1.058050682563394 1.070917212925253 1.072789358569753 0.9650219280305816 0.8057396544839844 0.9766844641460758 1.0 18.88359482140208 -6.0942990508481305 1.0381856796072162 0.9217662890342195 1.2319967819269928 0.589600129762603 0.09837778134307901 0.3544504870143085 0.8138134226412064 0.05236139501890609 0.05599063765440646 8.048240565319264e-07 6.0942990508481305 0.31023049289277327 IRANS(ph)ISR ddPTM_KYSE-520_SHP099_60min_R1 4 IRANSISR 8 1 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79;H0Y4T4 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 IRANS(0.999)IS(0.001)R;IRANS(0.956)IS(0.044)R;IRANS(0.764)IS(0.236)R;IRANS(0.988)IS(0.012)R 110.54 0.00071063 989600000.0 458635.0 400281.0 511769.0 424810.0 403803.0 450441.0 411427.0 466170.0 567730.0 459500.0 True False 433193.60228379443 381050.89992596966 544758.4485993517 465183.81467621605 435579.99877521576 447629.6306363948 453018.05630057346 464552.96507489594 464644.5433086407 455429.1874855907 0.9511766355499564 0.8366852858722976 1.19614303072437 1.02141853763146 0.956416520381661 0.9828742709876436 0.9947058044339911 1.0200333615850958 1.0202344427548171 1.0 18.796867228123386 -4.698955806274697 24.9999999999972 1.019681843497346 0.8939308332044043 0.3791591411590458 0.06638160751349827 71.08027656729045 28438.02392064926 0.01698739265693391 0.044944403753540814 2.0000653855574944e-05 4.698955806274697 -0.12575101029294178 IRDDKDWK ddPTM_KYSE-520_SHP099_60min_R1 1 IRDDKDWK 8 2 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 0 107.21 0.00098821 601580000.0 888660.0 860410.0 690830.0 639910.0 878460.0 968560.0 742950.0 801740.0 863540.0 677910.0 False True 839364.258300209 819074.6120982599 735362.007167082 700726.8540040428 947589.8042463185 962514.8577709112 818054.6364932556 798958.9510675218 706742.904071908 671904.2448059986 1.2492319624242911 1.2190347336393956 1.0944446516771238 1.04289689999855 1.4103048337191553 1.4325179000005002 1.2175166964891784 1.1890964482568616 1.0518506312993579 1.0 19.35789611906758 -7.761818793258908 2.3905061540261157 1.0008129744261034 1.2374130007865394 0.3594581102063056 0.11273394156934124 0.3569111624776963 3.8497274366219325 0.11834973381543655 0.033857453976486034 1.7305382652046368e-08 7.761818793258908 0.23660002636043598 IRDIDLK ddPTM_KYSE-520_SHP099_60min_R1 2 IRDIDLK 7 1 Q13243-3;Q13243;G3V5K8;B4DJK0;B4DUA4;Q13243-2 Q13243-3 SRSF5 Serine/arginine-rich splicing factor 5 0 ; 122.19 0.0026654 1057430000.0 1922560.0 1926560.0 1350570.0 1252730.0 2088120.0 2331200.0 1575240.0 1901140.0 2056700.0 2155400.0 False True 1815911.7642716567 1834005.1657744828 1437629.9031884053 1371789.082552992 2252443.1642224113 2316650.116085265 1734480.632060889 1894545.3890694114 1683255.125187822 2136304.832875824 0.850024648320968 0.858494133211132 0.6729516691927878 0.6421317133408972 1.054364119557903 1.0844192647201316 0.8119068989447482 0.8868328900979155 0.7879283420998859 1.0 21.02668609158383 -5.760209402534428 24.999570552716143 0.9329756743007611 0.7573037461641271 0.39881672121114775 0.1091809186489814 39.30044497987595 798778.0579919723 0.036070250589916225 0.04399696308430746 1.7369631202431892e-06 5.760209402534428 -0.17567192813663401 IRDS(ph)AGQK ddPTM_KYSE-520_SHP099_60min_R1 3 IRDSAGQK 8 1 P52209-2;P52209;K7ELN9;K7EPF6 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 1 IRDS(1)AGQK;IRDS(1)AGQK;IRDS(1)AGQK 81.642 0.014393000000000001 1038940000.0 1922700.0 1504700.0 1347990.0 1635510.0 1663650.0 1789860.0 1676760.0 1489780.0 1891260.0 2110110.0 True False 1816043.9981925734 1432411.953399255 1434883.5922602597 1790948.3786659865 1794569.7901263433 1778688.8198251445 1846263.2644006105 1484612.300897266 1547854.8587848125 2091416.0670407366 0.8683322399651434 0.6849005207395465 0.6860823223427551 0.856332896591017 0.858064456139319 0.8504710506226111 0.8827814290501236 0.7098598525151087 0.7400989612626244 1.0 20.996048670058283 -5.273855968515617 24.260468843265947 0.8330834497784532 0.7402845743521576 0.19289155461517649 0.08833436387994316 853.524292240584 1667679.10446972 0.02511441315583812 0.0375656227615614 5.3228475944286645e-06 5.273855968515617 -0.09279887542629561 IREEFPDR ddPTM_KYSE-520_SHP099_60min_R1 7 IREEFPDR 8 1 P04350;Q9BUF5;K7ESM5;M0QYM7;M0R042;K7ES63 P04350 TUBB4A;TUBB6 Tubulin beta-4A chain;Tubulin beta-6 chain 0 ;;;;;; 178.32 5.9293e-05 6551040000.0 5568710.0 5219320.0 3560710.0 3094090.0 5108120.0 5096940.0 3812020.0 4188320.0 4310640.0 4442600.0 False True 5259802.55535183 4968576.032840965 3790239.0639374363 3388151.3833279237 5510099.982772924 5065128.106846105 4197376.183330004 4173791.6954812333 3527936.438391422 4403242.020290498 1.1945295150968835 1.128390401877835 0.8607837240087431 0.7694674441502526 1.251373410178667 1.1503178983815976 0.9532467586356037 0.9478905943048466 0.8012133837146366 1.0 22.07013471223106 -6.966936853463959 11.953923045304315 0.9148204818218811 1.0491264333428727 0.1683502543560459 0.14611858624693552 1.686822690218822 605.7010810610315 0.0667790351100986 0.04495586268479325 1.0791036127830102e-07 6.966936853463959 0.13430595152099156 IREESGAR ddPTM_KYSE-520_SHP099_60min_R1 2 IREESGAR 8 1 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 0 ; 108.57 0.0013808 1299600000.0 658080.0 612360.0 396460.0 329750.0 479790.0 598610.0 394740.0 433000.0 525150.0 535380.0 False True 621574.9905500436 582941.3064289001 422016.44595842843 361089.34085704765 517546.74336832686 594873.8529468955 434644.17149114714 431498.0240629596 429795.99795419147 530636.9497193369 1.1713752517211728 1.0985690060543802 0.7953016580953141 0.6804828443402482 0.9753311442824822 1.1210562198157037 0.8190989559265294 0.8131699541300061 0.8099624388793845 1.0 19.017365612349526 -4.654937374959636 5.368076076525864 0.8738058213107429 1.151939146339531 0.43112841456721407 0.1194625129067964 0.19446233907283292 8.275004750240852 0.0331253499969306 0.09142789235247534 2.213413859731758e-05 4.654937374959636 0.27813332502878807 IREEYPDR ddPTM_KYSE-520_SHP099_60min_R1 10 IREEYPDR 8 1 Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A075B736;Q5SQY0;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;Q3ZCM7 Q5JP53;P68371 TUBB;TUBB2B;TUBB2A;TUBB8;TUBB1;TUBB4B Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-8 chain 0 ;;;;;;;;; 178.55 5.6943999999999996e-05 77984650000.0 25768620.0 23343730.0 16331460.0 14402850.0 24727070.0 23643940.0 17146590.0 19653770.0 19036650.0 19600040.0 False True 24339183.28012959 22222262.171146914 17384212.0428599 15771692.533625245 26672949.731217153 23496369.400185786 18879934.651792053 19585595.659094427 15580074.234894117 19426398.894200396 1.2528921810308276 1.143920820949538 0.8948756863038484 0.8118690766889258 1.3730259466246295 1.2095072034786873 0.9718700184535238 1.0081948674976275 0.8020052671494062 1.0 24.211515154996874 -6.916994482768192 7.334260316605679 0.9407715678441371 1.1035654303048221 0.20627355943244385 0.16240460178076516 0.43905347257160743 32.75651092379536 0.07431182330316304 0.04994013032728217 1.2106135129606126e-07 6.916994482768192 0.16279386246068506 IREHLEK ddPTM_KYSE-520_SHP099_60min_R1 4 IREHLEK 7 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;; 133.23 0.0020888 3913610000.0 3165170.0 2527850.0 1934590.0 1826870.0 2831130.0 2559940.0 1942030.0 2730610.0 2480790.0 2370270.0 False True 2989591.710490037 2406408.291619792 2059296.766853444 2000495.1755315084 3053923.824073805 2543962.4648984703 2138349.344786321 2721138.1512391656 2030341.0716267293 2349271.251842153 1.2725613137034666 1.0243211760808106 0.8765683252790291 0.8515386096700601 1.2999451730740361 1.0828730240936004 0.9102181551447326 1.158290320500631 0.8642429306682495 1.0 21.163781868921422 -4.265081691015585 5.972210029085868 1.0114797486252265 1.2792983602826837 0.25387675081478356 0.13628669128860524 0.18753515980606583 32.2918536680972 0.03457919115961108 0.20517901034362557 5.4314815543544517e-05 4.265081691015585 0.26781861165745724 IRELESQISELQEDLESER ddPTM_KYSE-520_SHP099_60min_R1 11 IRELESQISELQEDLESER 19 1 P35579 P35579 MYH9 Myosin-9 0 ;;;;;;;;;; 266.78 3.5082999999999997e-35 2041531000.0 417105.0 397065.0 333411.0 2395911.0 436016.0 342528.0 312873.0 384865.0 481448.0 283271.0 False True 393967.35417179635 377989.40139328426 354903.2065364619 2623617.661083094 470327.97860831703 340390.1556976897 344501.25618622336 383529.9931431664 394029.179516423 280761.43932150287 1.4032103380146168 1.346300981740034 1.2640738963090246 9.34465098705653 1.6751872327799955 1.2123821437882905 1.2270248258406005 1.366035143821806 1.4034305439829866 1.0 18.09898527931092 -5.974684389134498 24.99999224953741 1.2837311412222372 3.3565560085619897 0.17172068891702452 2.19550356386694 438.43198983492255 432963.8382974629 0.7171988960248269 0.8132007467179009 1.0600237867463528e-06 5.974684389134498 2.0728248673397527 IRES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 IRESPK 6 1 P51587 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 IRES(1)PK 84.522 0.027832 1069300000.0 3929600.0 2843800.0 2217100.0 2986500.0 3390200.0 3331700.0 3221200.0 2814400.0 3512700.0 3903700.0 True False 3711617.2545366134 2707179.5793691776 2360017.813485425 3270336.062076036 3656989.4524006364 3310905.624468634 3546830.331882462 2804637.503285895 2874882.227960941 3869116.255032647 0.959293288153032 0.6996893866520263 0.6099630142712038 0.8452410955143144 0.9451743528367512 0.8557265810149964 0.9167029621477565 0.7248780647616467 0.7430333023003681 1.0 21.8835726473013 -5.4852168762445555 24.94184375089272 0.8565577142989962 0.7468108517838039 0.15157377230713687 0.11330075492742547 1035.072394272465 685483.507013063 0.032701243155704385 0.048489718121374197 3.2717726959818775e-06 5.4852168762445555 -0.10974686251519228 IRETTDFK ddPTM_KYSE-520_SHP099_60min_R1 4 IRETTDFK 8 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 ;;; 111.06 0.0083869 1158920000.0 1825180.0 1744330.0 1146320.0 1123030.0 1751520.0 1732730.0 1205230.0 1480440.0 1489330.0 1595530.0 False True 1723933.6269938757 1660529.7685072895 1220213.6213768485 1229762.4335487175 1889354.6592144303 1721915.3893464427 1327066.410311284 1475304.699177294 1218905.2149540412 1581394.8455035554 1.0901348463956404 1.0500412172385294 0.7716059179314589 0.7776441393149544 1.1947393559467514 1.0888586074770858 0.8391746147931278 0.9329135625881723 0.7707785430184019 1.0 20.59276619668485 -6.783964261186455 24.996712417615964 0.8801261345527153 0.9869592642961524 0.13039714186096563 0.13753569780721944 587.5339435529289 652002.3308992656 0.062277076303356924 0.04202107648420367 1.6445070468604854e-07 6.783964261186455 0.10683312974343717 IRGS(ph)YLT(ph)VT(ph)LQRPTK ddPTM_KYSE-520_SHP099_60min_R1 1 IRGSYLTVTLQRPTK 15 2 I3VM54;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5 I3VM54 KDM2A Lysine-specific demethylase 2A 3 IRGS(0.507)Y(0.509)LT(0.972)VT(0.969)LQRPT(0.044)K 44.806999999999995 0.056012 0.0 638710.0 741760.0 495580.0 426370.0 474160.0 755960.0 554650.0 805280.0 859580.0 774500.0 True False 603279.483063181 706124.7361955416 527525.8797560355 466892.07660718553 511473.69439864595 751241.7732308761 610719.4348623528 802486.671633764 703501.9402484315 767638.5325518822 0.7858900478297802 0.9198661951584836 0.6872060968622387 0.6082186560581881 0.6662949717992135 0.9786399996538763 0.7955820467116484 1.0453965474688134 0.9164494881591735 1.0 19.55006760562392 -6.2665220881104515 24.99693155236628 0.9405739338525718 0.7343177123116033 0.5391644677286007 0.09869570724751743 388.4919993705136 1910610.9505578212 0.0369594178837708 0.0336020837607723 5.413497142692974e-07 6.2665220881104515 -0.20625622154096857 IRGTDEMK ddPTM_KYSE-520_SHP099_60min_R1 1 IRGTDEMK 8 1 A0A087WUP0;A0A087WTN9;A0A075B752;P13928-3;Q5VT79;P13928;B4DTF2;A0A075B765;Q5VT79-2 A0A087WUP0 ANXA8L1;ANXA8;ANXA8L2 Annexin;Annexin A8;Annexin A8-like protein 2 0 52.716 0.068521 310020000.0 301430.0 289910.0 261260.0 256600.0 353300.0 314210.0 260280.0 292820.0 308400.0 278410.0 False True 284709.07701419224 275982.2884362186 278101.23763077974 280987.1868503968 381102.69999797794 312248.89883971866 286591.6424880067 291804.2757647017 252402.33413133898 275943.5039997025 1.0317658248425343 1.0001405520911124 1.0078194760876833 1.0182779546450194 1.3810895870858724 1.1315682170943777 1.0385881107326798 1.057478329930232 0.9146884433692307 1.0 18.074013397807608 -7.515689881741493 2.4106440549266615 0.9600735765424507 1.0917977232518445 0.1738818290941121 0.10838928664414556 0.5894993770313397 6.401615120039996 0.09723639234603522 0.03267826438728758 3.050072188464425e-08 7.515689881741493 0.1317241467093938 IRHDS(ph)S(ph)DT(ph)SPPRR ddPTM_KYSE-520_SHP099_60min_R1 1 IRHDSSDTSPPRR 13 2 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 3 IRHDS(1)S(1)DT(0.537)S(0.463)PPRR 67.605 0.063016 544880000.0 222040.0 193040.0 217480.0 194260.0 211140.0 212780.0 184380.0 207050.0 241710.0 205980.0 True False 209722.99857423393 183766.06864105276 231499.1087803034 212722.41199360153 227755.51677773317 211451.9610932665 203018.92977539066 206331.7918758335 197821.55701324873 204155.17745001486 1.0272724953330281 0.9001293571702136 1.1339369967091988 1.0419643265999672 1.1156000039895955 1.0357413597558072 0.9944343920697166 1.010661568582318 0.9689764398048791 1.0 17.639306629738037 -9.791001721170433 8.20931516759085 1.0000011016344332 1.0270182007329691 0.013632596943215836 0.06354272443370015 0.0 0.0 0.06288867575491613 0.015252744281925867 1.6180736249758163e-10 9.791001721170433 0.02701709909853589 IRLDETDDPDDYGDR ddPTM_KYSE-520_SHP099_60min_R1 2 IRLDETDDPDDYGDR 15 1 P07384 P07384 CAPN1 Calpain-1 catalytic subunit 0 ; 137.79 7.1408e-05 322070000.0 560610.0 574450.0 499990.0 273790.0 497450.0 550440.0 415910.0 442050.0 541020.0 508520.0 False True 529511.8457516718 546852.5597329712 532220.1554122856 299810.91928203526 536596.4848966724 547004.499784649 457954.24169043684 440516.6317252454 442784.4060043355 504014.90842257335 1.0505876649738335 1.0849928257964985 1.0559611363044534 0.5948453394372006 1.0646440728828248 1.0852942852357703 0.9086124914909887 0.8740150824187722 0.8785145014660929 1.0 18.94310688274377 -5.042028413100279 24.99880864286044 0.9154288447261605 1.068462764333488 0.22023690982647548 0.1283598494873074 717.3374969644888 426676.8942898796 0.03572535423004414 0.06188559899695972 9.077611392508672e-06 5.042028413100279 0.1530339196073276 IRLS(ph)PEPWTPETGLVTDAFK ddPTM_KYSE-520_SHP099_60min_R1 2 IRLSPEPWTPETGLVTDAFK 20 1 O95573 O95573 ACSL3 Long-chain-fatty-acid--CoA ligase 3 1 IRLS(1)PEPWTPETGLVTDAFK;IRLS(1)PEPWTPETGLVTDAFK 219.38 4.6423e-19 601640000.0 481340.0 566410.0 450780.0 463430.0 519340.0 596410.0 512010.0 577730.0 782050.0 439830.0 True False 454639.1106724987 539198.8134012569 479838.0000735013 507474.24786469026 560209.1033596098 592687.5839629433 563768.9675360547 575725.9894731961 640049.4338761794 435933.4483825618 1.0429094449149068 1.236883325658628 1.1007138861535815 1.1641094523661017 1.2850794208110123 1.359582721082735 1.2932454933839084 1.3206740423550998 1.4682274008818237 1.0 18.73374837774861 -5.756275640136938 3.6339217168707596 1.310004187383664 1.1371396570878334 0.27045159606201186 0.12010397061819816 0.27122255172636917 7.663193036563813 0.03537644328928173 0.043830738645889634 1.752767693601484e-06 5.756275640136938 -0.1728645302958307 IRLS(ph)SSASR ddPTM_KYSE-520_SHP099_60min_R1 2 IRLSSSASR 9 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 IRLS(0.478)S(0.478)S(0.044)ASR;IRLS(0.333)S(0.333)S(0.333)AS(0.001)R 127.56 0.00041008 1015200000.0 321867.0 285701.0 283980.0 300188.0 295281.0 343520.0 408760.0 455990.0 486830.0 379889.0 True False 304012.3958840432 271975.49511405634 302285.805184065 328717.7772651865 318517.9347809317 341375.9642577258 450081.44991316134 454408.2771188659 398433.94398560177 376523.4790091698 0.8074194912998754 0.7223334274658412 0.8028338789908589 0.8730339423459458 0.8459444165849072 0.90665252843213 1.1953609137405217 1.2068524340491376 1.0581914972051407 1.0 18.522380304789408 -6.6042173923864915 3.7399895704449855 1.1316010404856436 0.8124070389783781 0.81397402490754 0.06849070072662854 0.09460025606737105 2.6007746937419376 0.02876696202618754 0.02191099511672449 2.487611796499759e-07 6.6042173923864915 -0.3191940015072655 IRLSS(ph)SASR ddPTM_KYSE-520_SHP099_60min_R1 1 IRLSSSASR 9 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 IRLS(0.071)S(0.465)S(0.465)ASR 90.689 0.0026485 624810000.0 77942.0 64459.0 74896.0 71012.0 91767.0 72827.0 71657.0 103380.0 112250.0 81381.0 True False 73618.40188647505 61362.29288506845 79723.91599783696 77760.95912946366 98988.54081719361 72372.45967919606 78900.78886492671 103021.39890907345 91868.22959222685 80660.02765345984 0.9126999336370456 0.7607521925072929 0.9883943548885862 0.9640581759226334 1.2272316746837564 0.8972530977813484 0.978189459640513 1.2772298982054024 1.1389560884719863 1.0 16.29956627990646 -5.157553047668935 1.8406766926204627 1.0834432886853478 0.8402172009207693 0.37270479161023506 0.11828004947502604 0.380542845497496 2.4958287977201814 0.03726470199366441 0.08598298236104601 6.957399671193004e-06 5.157553047668935 -0.24322608776457844 IRLSSS(ph)ASR ddPTM_KYSE-520_SHP099_60min_R1 1 IRLSSSASR 9 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 IRLS(0.31)S(0.31)S(0.374)AS(0.007)R 111.26 0.0014472 487610000.0 783580.0 754750.0 826770.0 751190.0 735100.0 758660.0 872210.0 1116600.0 1247500.0 936690.0 True False 740113.2553719967 718490.6770971543 880064.9170787729 822582.8717464915 792948.1878531382 753924.9215293626 960381.4987492876 1112726.775216399 1020985.4469158406 928391.6553337921 0.7971993836005536 0.7739090210142288 0.94794574253509 0.8860300144024256 0.8541095595781105 0.8120763658289215 1.0344572715962144 1.1985531847723592 1.0997356999603336 1.0 19.82437402979622 -6.891348665033021 4.313101972656199 1.1128971324975412 0.8493382648259648 0.766676209082352 0.06473071050982683 0.10036956695188916 3.2977573884246967 0.028892723874177385 0.019012579025512722 1.2842552061849162e-07 6.891348665033021 -0.26355886767157644 IRPGEY(ph)EQFESTIGFK ddPTM_KYSE-520_SHP099_60min_R1 1 IRPGEYEQFESTIGFK 16 1 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0;Q9H4G0-4 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 IRPGEY(0.998)EQFES(0.001)T(0.001)IGFK 91.789 0.00318 76742000.0 226720.0 226550.0 209060.0 196020.0 220170.0 213230.0 160660.0 178760.0 243270.0 180360.0 True False 214143.38964488506 215666.19794151708 222536.34210782687 214649.68186443814 237496.12640406156 211899.15247634775 176901.08069049954 178139.92328289765 199098.30033764822 178762.15071795654 1.1979235469299738 1.2064421751212102 1.244873935640523 1.2007557584329105 1.3285593479951638 1.1853692273521221 0.9895891271167725 0.9965192439643411 1.1137609361826106 1.0 17.447681781697145 -6.657985353149071 4.8716514903706765 1.0253125124330227 1.2345646979726075 0.8109875381636833 0.04824890269574976 0.08781956752460535 3.4221315776972006 0.01894112189780529 0.014385998728454823 2.1979339982230015e-07 6.657985353149071 0.2092521855395848 IRPLS(ph)DGNSPWSTILIK ddPTM_KYSE-520_SHP099_60min_R1 2 IRPLSDGNSPWSTILIK 17 1 Q5TCX8;Q5TCX8-3 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 IRPLS(0.975)DGNS(0.025)PWSTILIK;IRPLS(1)DGNSPWSTILIK 244.01 1.4195e-23 8803300000.0 1946460.0 1856420.0 1824180.0 1759960.0 1897590.0 1830160.0 1616540.0 1725180.0 2102250.0 1620300.0 True False 1838485.9836281866 1767234.7966567709 1941769.561591199 1927226.0692487312 2046919.5371898185 1818737.2925766197 1779955.639110047 1719195.7532400398 1720534.3934098782 1605945.4025743257 1.1447998049504666 1.1004326758704865 1.209113061053351 1.2000570294353679 1.2745884971609946 1.1325025680581602 1.1083537686005909 1.0705194276742995 1.0713529804013677 1.0 20.614991415620135 -7.0005634278457745 1.5363883332541441 1.0438054308798659 1.182631371808864 0.6211157898215047 0.046677114810446486 0.31017595483739974 1.418171160354797 0.034528817333370994 0.016630295489328064 9.987035006237985e-08 7.0005634278457745 0.13882594092899803 IRPVS(ph)LPVDR ddPTM_KYSE-520_SHP099_60min_R1 5 IRPVSLPVDR 10 1 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 IRPVS(1)LPVDR;IRPVS(1)LPVDR;IRPVS(1)LPVDR;IRPVS(1)LPVDR;IRPVS(1)LPVDR 148.41 0.00011255 11688200000.0 6249310.0 6205010.0 6433460.0 6245030.0 6253030.0 6167710.0 6033210.0 6319730.0 6529350.0 6269830.0 True False 5902648.316609375 5906912.005690106 6848171.125499948 6838555.77356327 6745107.886126119 6129215.034094139 6643105.745255378 6297808.3316660775 5343784.631518984 6214284.1840539295 0.94985168714295 0.9505377981984553 1.1020048202933161 1.1004575218995043 1.0854199271147433 0.9863107081298147 1.0690057854614727 1.013440670741527 0.8599195777417651 1.0 22.567156787859975 -7.5894852646670525 8.259111293494966 0.9308576652238006 1.0370709022036124 0.303826618453957 0.0625161469935329 0.33626135981580657 36.8671327873093 0.044415940697014655 0.01663867884665404 2.5734440782502366e-08 7.5894852646670525 0.10621323697981178 IRQEDENFNSLLQNGDILNS(ph)STEEKFK ddPTM_KYSE-520_SHP099_60min_R1 1 IRQEDENFNSLLQNGDILNSSTEEKFK 27 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 IRQEDENFNSLLQNGDILNS(0.432)S(0.432)T(0.137)EEKFK 68.26899999999999 0.017476 94873000.0 22559.0 28441.0 33521.0 36496.0 23205.0 26127.0 25142.0 25908.0 51016.0 26055.0 True False 21307.607299748404 27074.651669188668 35681.81729549632 39964.568867077505 25031.10148161079 25963.931701681453 27683.598722273993 25818.131194972644 41752.78040870421 25824.17297048327 0.8251031823595185 1.048422797513581 1.3817215883846592 1.5475643271425013 0.9692895687393764 1.0054119344444419 1.0720033030260456 0.9997660418586287 1.6168099732149082 1.0 14.656434526491175 -4.4307955297313475 3.90042481697221 1.1931655628736466 0.8386442786190478 0.20324090287274 0.2275972992245633 0.39997120453970797 10.31812579453333 0.05956961790206785 0.2856347812668275 3.708552831339839e-05 4.4307955297313475 -0.35452128425459883 IRQEVGPPLPPLLAPLIAT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 3 IRQEVGPPLPPLLAPLIATPPR 22 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 IRQEVGPPLPPLLAPLIAT(1)PPR;IRQEVGPPLPPLLAPLIAT(1)PPR;IRQEVGPPLPPLLAPLIAT(1)PPR 101.27 0.0012192 570131000.0 226550.0 313559.0 274052.0 199121.0 225997.0 286850.0 166664.0 201353.0 317321.0 208408.0 True False 213982.81988377147 298495.1549783455 291717.8304187033 218045.39997208826 243781.67815296666 285059.662748395 183512.0236038928 200654.55343914352 259703.50541144784 206561.6672589707 1.0359270561826786 1.445065577458357 1.4122554019326856 1.055594694143905 1.180188373708915 1.3800220850803344 0.8884127729944197 0.9714026619836423 1.2572686348714066 1.0 17.65621302492994 -6.759320755149676 24.996849456527134 1.0268879108523474 1.2554665234729154 0.3250318562447585 0.15681521376502489 69.09251441302625 815211.1371069169 0.0632182385612515 0.046517298419859215 1.7405209089540995e-07 6.759320755149676 0.228578612620568 IRS(ph)EDEEDLGNARPSAPSTLFDFLESK ddPTM_KYSE-520_SHP099_60min_R1 3 IRSEDEEDLGNARPSAPSTLFDFLESK 27 2 Q9H7E2-2;Q9H7E2;Q9H7E2-3 Q9H7E2-2 TDRD3 Tudor domain-containing protein 3 1 IRS(0.93)EDEEDLGNARPS(0.049)APS(0.015)T(0.006)LFDFLESK;IRS(1)EDEEDLGNARPSAPSTLFDFLESK;IRS(1)EDEEDLGNARPSAPSTLFDFLESK 243.73 4.0016e-31 1093170000.0 406377.0 421685.0 398792.0 379524.0 420900.0 460338.0 406159.0 533104.0 614710.0 491582.0 True False 383834.4577175348 401426.61963791057 424498.77040976024 415593.8468519485 454022.4354065918 457464.8597882889 447217.5154498481 531254.7866514093 503094.15957806475 487226.96592500934 0.7877939534582574 0.8239006617291692 0.8712546720476391 0.852977925930138 0.9318499737481112 0.9389153141796728 0.9178833412900237 1.0903640886189712 1.0325663289652518 1.0 18.89423445687993 -6.172043969708282 0.5894873150027361 1.045226709647449 0.7996147094676994 0.8128993290914115 0.03915812968682852 0.3657312740567641 0.2775773641203228 0.03251986241849434 0.04067321220669513 6.729085248882113e-07 6.172043969708282 -0.2456120001797496 IRS(ph)IEALLEAGQAR ddPTM_KYSE-520_SHP099_60min_R1 4 IRSIEALLEAGQAR 14 1 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 IRS(1)IEALLEAGQAR;IRS(1)IEALLEAGQAR;IRS(1)IEALLEAGQAR;IRS(1)IEALLEAGQAR 147.25 2.4182e-06 131341000.0 85592.6 92551.9 86764.3 75921.4 79882.0 75318.0 69968.7 77301.3 111223.0 80902.9 True False 80844.60785338204 88105.56780076587 92357.26560578849 83136.94702939877 86168.25893359333 74847.9124242064 77041.81902470648 77033.15983255903 91027.7069036638 80186.16324750376 1.008211449197861 1.0987627320291902 1.1517855682995735 1.036799164124951 1.0746025928142384 0.9334267832865348 0.9607869475798224 0.9606789589718537 1.1352046689488855 1.0 16.29106568934152 -6.1666695454616605 9.146813992044676 0.9932947919489348 1.0779396733570934 0.2711476654390583 0.061915947357177224 0.49681921171391674 44.56410460910981 0.020751625699345227 0.020760499144177488 6.812875530123309e-07 6.1666695454616605 0.08464488140815862 IRS(ph)S(ph)VEKENQK ddPTM_KYSE-520_SHP099_60min_R1 1 IRSSVEKENQK 11 2 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 IRS(1)S(1)VEKENQK 73.834 0.014884 1846900000.0 3492500.0 2824900.0 3001300.0 2968700.0 3009200.0 2583300.0 2709100.0 3115100.0 3933800.0 3063900.0 True False 3298764.062873861 2689187.563738655 3194768.600249791 3250844.3554277993 3246006.919994106 2567176.6664735205 2982962.266268094 3104294.445169809 3219521.083028081 3036756.229678127 1.0862788493311182 0.8855460762564035 1.05203327452741 1.0704989500498576 1.0689059886569026 0.8453680415255529 0.9822857156315986 1.0222402492605869 1.060184235917193 1.0 21.534099672643638 -7.445208572200925 5.8385242775746145 1.033606968070938 0.996164446897233 0.028028244876374342 0.0768568090356543 0.8765600137580529 50.591807785295174 0.0450070602499694 0.02079211910189888 3.587496018900698e-08 7.445208572200925 -0.03744252117370506 IRS(ph)SVEK ddPTM_KYSE-520_SHP099_60min_R1 3 IRSSVEK 7 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IRS(0.5)S(0.5)VEK;IRS(0.879)S(0.121)VEK;IRS(0.651)S(0.349)VEK 76.943 0.041033999999999994 17477800000.0 36333500.0 30246300.0 28373200.0 31395100.0 31423100.0 32113800.0 31639200.0 33323100.0 34212800.0 30999600.0 True False 34318008.325963415 28793222.347378153 30202181.870725118 34378880.86471899 33895919.19701804 31913365.86219073 34837599.10483534 33207509.943769976 28000617.954502843 30724967.66132382 1.116942048702706 0.9371278324768647 0.9829849848383477 1.118923256280418 1.1032043896887733 1.038678582642183 1.1338530763919548 1.0807988574572578 0.9113310797638251 1.0 24.87290815634333 -3.8928463801426187 20.025051076719517 1.0421534859651758 11.579290295223222 0.09552059736899654 0.07277216697045237 1499.8928276263118 280595.8347691301 0.018163289116610488 755.2758867807087 0.0001279833930533917 3.8928463801426187 10.537136809258046 IRS(ph)SVEKENQK ddPTM_KYSE-520_SHP099_60min_R1 5 IRSSVEKENQK 11 2 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IRS(0.5)S(0.5)VEKENQK;IRS(0.575)S(0.425)VEKENQK;IRS(0.5)S(0.5)VEKENQK;IRS(0.5)S(0.5)VEKENQK;IRS(0.5)S(0.5)VEKENQK 166.3 1.221e-05 41983930000.0 4159710.0 3712750.0 3753100.0 2944600.0 3112670.0 3024910.0 2662950.0 2650480.0 4169650.0 2758910.0 True False 3928962.5941236936 3534383.9170486354 3995030.8311723233 3224453.8986737304 3357619.420330335 3006030.414656606 2932146.973887499 2641286.10350668 3412546.66832275 2734468.203799503 1.4368287730186289 1.29253063251482 1.4609900475790092 1.1791886605934565 1.2278875342799644 1.099310794866721 1.0722914860788377 0.9659231362926993 1.2479745288612487 1.0 21.382828855965265 -5.697204274689352 1.0613584502810258 1.0676525315571033 1.399101944659241 0.6848841908958114 0.09007703447467982 0.29161699576286804 0.695380421170458 0.037196637362286525 0.06101243735490595 2.008148038214946e-06 5.697204274689352 0.3314494131021377 IRSEDEEDLGNARPS(ph)APSTLFDFLESK ddPTM_KYSE-520_SHP099_60min_R1 2 IRSEDEEDLGNARPSAPSTLFDFLESK 27 2 Q9H7E2-2;Q9H7E2;Q9H7E2-3 Q9H7E2-2 TDRD3 Tudor domain-containing protein 3 1 IRS(0.473)EDEEDLGNARPS(0.508)APS(0.009)T(0.009)LFDFLESK;IRS(0.409)EDEEDLGNARPS(0.473)APS(0.059)T(0.059)LFDFLESK 70.525 0.01908 491520000.0 100293.0 93955.0 95519.0 109710.0 93054.0 100773.0 97799.0 113389.0 137613.0 115542.0 True False 94729.5473608611 89441.26077066985 101676.30757580373 120136.80541448572 100376.82039516534 100144.03832715354 107685.47734626028 112995.68002419146 112625.94814142634 114518.38777031568 0.8271994498460444 0.7810209566524645 0.8878601031279909 1.0490612708889917 0.8765126924113407 0.8744799876855399 0.9403335083815548 0.9867033777215041 0.983474796792591 1.0 16.805219739267233 -1.8564113857849656 0.29597150312558235 0.9846149956731192 2.2026591352364196e-16 0.48184400532187777 0.057975431424531404 30.624272917603022 0.6895110980280609 0.06613779436104669 14.418959670325881 0.013918377589140898 1.8564113857849656 -0.9846149956731189 IRSEFK ddPTM_KYSE-520_SHP099_60min_R1 2 IRSEFK 6 1 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 0 ; 134.66 0.0076441 3566000000.0 6015600.0 5961400.0 3301200.0 2294600.0 4115500.0 4963200.0 3233500.0 3494400.0 3847700.0 4459800.0 False True 5681902.676198698 5675005.395756167 3514000.6341067543 2512678.0941033536 4439366.436008149 4932222.827794445 3560373.7359188986 3482278.7419990925 3149054.672623713 4420289.6416719 1.2854141101146517 1.2838537416769125 0.7949706736361383 0.568441956928636 1.0043157340090125 1.1158143985173141 0.8054616381591337 0.7877942452390925 0.7124091242655847 1.0 22.075709475346535 -4.757438965601788 24.99637247718061 0.844623243138844 1.2846341393284433 0.5755670886108102 0.14972466237477425 72.40201809397824 452382.6482252858 0.041288984335285446 0.10116977965247802 1.748078914739942e-05 4.757438965601788 0.4400108961895993 IRSS(ph)VEK ddPTM_KYSE-520_SHP099_60min_R1 10 IRSSVEK 7 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IRS(0.042)S(0.958)VEK;IRS(0.024)S(0.976)VEK;IRS(0.006)S(0.994)VEK;IRS(0.099)S(0.901)VEK;IRS(0.007)S(0.993)VEK;IRS(0.001)S(0.999)VEK;IRS(0.147)S(0.853)VEK;IRS(0.003)S(0.997)VEK;IRS(0.052)S(0.948)VEK;IRS(0.001)S(0.999)VEK 118.81 0.0016977000000000001 98489130000.0 44976980.0 36283230.0 34597620.0 36531530.0 37261740.0 36527850.0 38475340.0 39727070.0 40924150.0 35300780.0 True False 42482017.260013185 34540129.16856149 36827837.943349265 40003475.62759496 40194026.94770071 36299866.13883204 42364802.85033234 39589266.066537805 33493355.973868426 34988042.552791275 1.2141867381095903 0.9871981010782768 1.052583547301397 1.1433470611348495 1.148793245208115 1.0374934832110552 1.210836610433714 1.1315084576910535 0.9572800742805886 1.0 25.060358617775428 -7.76097332226181 24.999964188248473 0.9786399897306267 1.1119364664019473 0.3818432358353372 0.06964277522484712 12.997542697104901 697554.6315560407 0.05444529975042183 0.01765650113319811 1.7339105047251456e-08 7.76097332226181 0.1332964766713206 IRSS(ph)VEKENQK ddPTM_KYSE-520_SHP099_60min_R1 8 IRSSVEKENQK 11 2 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 IRS(0.081)S(0.919)VEKENQK;IRS(0.002)S(0.998)VEKENQK;IRS(0.03)S(0.97)VEKENQK;IRS(0.001)S(0.999)VEKENQK;IRS(0.462)S(0.538)VEKENQK;IRS(0.152)S(0.848)VEKENQK;IRS(0.064)S(0.936)VEKENQK;IRS(0.081)S(0.919)VEKENQK 188.19 6.841299999999999e-07 103932180000.0 6220590.0 5582110.0 5924310.0 4526720.0 5104520.0 4852920.0 4057430.0 4358210.0 6402420.0 4285230.0 True False 5875521.472261265 5313937.056682072 6306200.50183114 4956938.107792006 5506216.683254123 4822631.126180733 4467594.621100796 4343092.386723856 5239901.91987408 4247266.196058494 1.3833654875961878 1.2511429261517584 1.4847669561383645 1.1670891060212083 1.2964143119552873 1.1354671225119308 1.051875351078011 1.0225618518458508 1.2337116813485254 1.0 22.018103101296152 -6.060182727170841 1.129143085543258 1.0743314205810415 1.3511115572849308 0.6006796162967065 0.09507501683574783 0.33041110341890867 0.8873314977979819 0.044076601022313325 0.0481187861406486 8.705972135835451e-07 6.060182727170841 0.27678013670388935 IRT(ph)PEKKPTEPK ddPTM_KYSE-520_SHP099_60min_R1 2 IRTPEKKPTEPK 12 3 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 IRT(1)PEKKPTEPK;IRT(0.995)PEKKPT(0.005)EPK 80.411 0.0063321 7627400000.0 5287100.0 4792100.0 4681500.0 4493700.0 4683400.0 4372600.0 4329300.0 4168100.0 5616000.0 3919800.0 True False 4993814.023427447 4561880.322911255 4983276.980664843 4920779.896919833 5051956.935099152 4345308.981466385 4766947.893896294 4153641.833941852 4596275.96783916 3885073.6215582537 1.2853846567325775 1.174206917881145 1.2826724706097368 1.266586010008781 1.3003503735594273 1.1184624552168811 1.2269903631798698 1.0691282170029712 1.1830601979675361 1.0 21.88951050706929 -7.687381821680563 0.46922055115035716 1.0009413694830402 1.2644538417251172 0.6223404228512708 0.059333472217342184 0.6164559258144716 0.3586994845982985 0.06617264026807428 0.03915682410251528 2.054083898762597e-08 7.687381821680563 0.26351247224207697 IRT(ph)SPTFR ddPTM_KYSE-520_SHP099_60min_R1 1 IRTSPTFR 8 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 RPL23A 60S ribosomal protein L23a 1 IRT(0.643)S(0.354)PT(0.003)FR 79.65899999999999 0.031507 2353800000.0 90842.0 83489.0 76218.0 57800.0 72554.0 85257.0 76929.0 74546.0 82953.0 75783.0 True False 85802.8131709626 79478.0631204561 81131.1342331117 63293.294621796325 78263.58702420979 84724.8794385217 84705.73407468828 74287.41732516717 67890.8262749576 75111.62157828183 1.1423373822589935 1.058132702375804 1.0801408960204153 0.8426564796744753 1.0419637518096045 1.1279862910457987 1.1277313988808964 0.989026941027286 0.9038658046305301 1.0 16.196748524255774 -4.439942299346936 1.8714717526725224 1.0161995581210324 1.1529176327397832 0.18002643932140328 0.08532523619036919 1.1470866554806205 5.530930035050913 0.025374417290311035 0.2421372237910288 3.63126296766058e-05 4.439942299346936 0.13671807461875085 IRTPS(ph)GEFLER ddPTM_KYSE-520_SHP099_60min_R1 4 IRTPSGEFLER 11 1 B3KT28;Q9UNN5;B1ANM7;Q9UNN5-2 B3KT28 FAF1 FAS-associated factor 1 1 IRT(0.003)PS(0.997)GEFLER;IRT(0.032)PS(0.968)GEFLER;IRT(0.218)PS(0.782)GEFLER;IRT(0.005)PS(0.995)GEFLER 125.67 0.00012156 1093230000.0 670360.0 646410.0 627630.0 520986.0 568109.0 553857.0 487317.0 559246.0 698710.0 533202.0 True False 633173.7944704712 615355.4933188092 668088.034043506 570500.352799847 612815.9462019568 550400.1730201778 536579.7581155988 557306.1061549976 571841.8770457454 528478.2451048786 1.1981075859514623 1.1643913425361332 1.2641731996194496 1.0795153028231634 1.1595859467788332 1.0414812305300263 1.0153298893299052 1.0545488131576695 1.0820537691807184 1.0 19.01148455848508 -5.856415224111487 1.1706228814931807 1.0386891067909467 1.2012771533955986 0.6942435420866853 0.0453708659429996 0.26627935102424677 0.7734809071973927 0.01920035404316201 0.025542560817860636 1.3918254578041331e-06 5.856415224111487 0.16258804660465187 IRTS(ph)PTFR ddPTM_KYSE-520_SHP099_60min_R1 7 IRTSPTFR 8 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 RPL23A 60S ribosomal protein L23a 1 IRT(0.015)S(0.982)PT(0.003)FR;IRT(0.02)S(0.98)PTFR;IRT(0.187)S(0.813)PTFR;IRT(0.331)S(0.669)PTFR;IRT(0.351)S(0.648)PTFR;IRT(0.255)S(0.745)PTFR;IRT(0.043)S(0.952)PT(0.004)FR 125.72 0.00078776 49032900000.0 2485838.0 2227244.0 2176019.0 1725790.0 1886777.0 1929671.0 1765691.0 1891124.0 2391329.0 2019536.0 True False 2347943.610744804 2120243.8550785985 2316288.666493502 1889808.5627223183 2035255.6156073743 1917627.207513886 1944184.277763529 1884564.13223566 1957123.9340984465 2001644.482215235 1.1730073105421386 1.059250967850249 1.1571928417228456 0.9441279805247198 1.0167917598208758 0.9580258754999457 0.971293501437321 0.9415079196031848 0.9777580142166319 1.0 20.932754325070768 -5.263061099909676 24.999202802522575 0.97150558949614 1.1227604369818447 0.8053511184814293 0.035322513627216945 56.628755906949074 872953.3701723145 0.009209545530512783 0.014511084279024098 5.45681085051401e-06 5.263061099909676 0.15125484748570472 IRVDVADQAQDKDRDDR ddPTM_KYSE-520_SHP099_60min_R1 10 IRVDVADQAQDKDRDDR 17 3 E7EX17;P23588-2;P23588;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ;;;;;;;;; 233.63 1.9755e-23 19702350000.0 8890310.0 9550020.0 7114410.0 5426650.0 7533220.0 7963600.0 6079300.0 7265390.0 9059280.0 7004100.0 False True 8397146.781906385 9091222.70432773 7573016.252058471 5942397.184418182 8126041.555841419 7913896.218452569 6693854.9722504215 7240188.057844775 7414343.117864317 6942049.123107336 1.2096063616080739 1.309587780654943 1.0908906171307393 0.8560004516012846 1.1705537387790934 1.139994269431246 0.9642477103726081 1.042946820088762 1.0680338018906983 1.0 22.726930143279642 -4.87351447271732 5.364645635328224 1.0387343652467869 1.2574019406289223 0.5120294469712903 0.08630622055084806 0.15818171164479758 6.736366790227295 0.02304408693244499 0.049951075385625945 1.3380906229917318e-05 4.87351447271732 0.21866757538213544 IRYESLTDPSK ddPTM_KYSE-520_SHP099_60min_R1 2 IRYESLTDPSK 11 1 P08238;Q58FF7;Q58FF6;P07900;P07900-2;G3V2J8;Q58FF8 P08238;P07900;Q58FF8 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 2 0 ; 127.56 0.00018725 1864070000.0 2474200.0 2074630.0 1341200.0 1552540.0 2396600.0 2301900.0 1761410.0 2063800.0 1823510.0 2014860.0 False True 2336951.1938045784 1974961.660716883 1427655.8979958738 1700092.9348118273 2585198.785211309 2287532.988253549 1939470.512504996 2056641.1594945407 1492406.5509462971 1997009.9079373598 1.1702251373496348 0.988959370139906 0.7148967525506413 0.8513192288403779 1.294534781693431 1.1454790380165216 0.9711872258601891 1.029860268254138 0.7473205541016822 1.0 20.929410059891055 -7.724254686326498 24.995856058377868 0.8736597865065812 1.0155254623197651 0.11276969465017306 0.16456246424891605 362.22345379725544 243490.12227893123 0.11995539685330622 0.0453364461994629 1.8868844858135585e-08 7.724254686326498 0.141865675813184 IS(ph)APNVDFNLEGPK ddPTM_KYSE-520_SHP099_60min_R1 15 ISAPNVDFNLEGPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK;IS(1)APNVDFNLEGPK 321.06 9.579199999999998e-43 90868780000.0 17176870.0 18225680.0 18044160.0 17195094.0 18888770.0 18227470.0 17240580.0 18463024.0 21977230.0 18734060.0 True False 16224034.779858576 17350090.975496586 19207315.425276767 18829310.56386647 20375208.73660008 18113705.598593302 18983426.078246046 18398980.079046182 17986719.032883525 18568090.80327815 0.8737589099356551 0.9344036045123968 1.0344259745803142 1.0140682078386973 1.0973238418783955 0.9755287062359354 1.0223682272651624 0.9908924010538493 0.9686897389422512 1.0 24.146322147215464 -4.563068181437653 3.360477032575676 1.014549066568062 0.8807232132919596 0.6309819515110096 0.034616762312185766 0.14779456315778156 3.303213516650273 0.009281978415503059 0.034890129263191766 2.7348393404327472e-05 4.563068181437653 -0.13382585327610252 IS(ph)ASSATR ddPTM_KYSE-520_SHP099_60min_R1 7 ISASSATR 8 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;A0A1B0GU60;A0A1B0GV30;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 IS(0.995)AS(0.004)S(0.001)ATR;IS(0.923)AS(0.076)SATR;IS(0.877)AS(0.123)SATR;IS(1)ASSATR;IS(1)ASSATR;IS(0.969)AS(0.02)S(0.011)ATR;IS(0.967)AS(0.027)S(0.006)ATR 160.33 0.00022437 10132660000.0 6628481.0 6810398.0 6558951.0 6750445.0 6923106.0 7140814.0 6923638.0 7280954.0 8667540.0 7812794.0 True False 6260785.945380718 6483216.257464193 6981751.476152646 7392005.263204705 7467915.05511521 7096245.531075541 7623546.8972352045 7255698.069961433 7093733.226902534 7743578.723421752 0.8085132429071743 0.8372377280616542 0.9016181956070477 0.9545980646966686 0.9644009987949432 0.9164038727483659 0.9844991791943056 0.9369954550878856 0.9160794356550349 1.0 22.88456903663678 -4.8399673645857035 1.9593875158396423 0.9511858116353483 0.8093477942376527 0.8082758247870452 0.025388949501928663 0.14276164463633095 1.0505800015855904 0.007033395020390998 0.02419963540885312 1.4455483935817636e-05 4.8399673645857035 -0.14183801739769564 IS(ph)DAELEAELEK ddPTM_KYSE-520_SHP099_60min_R1 12 ISDAELEAELEK 12 0 Q8WUX9 Q8WUX9 CHMP7 Charged multivesicular body protein 7 1 IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK;IS(1)DAELEAELEK 274.24 5.4673000000000005e-22 10684410000.0 5281960.0 4863250.0 4620910.0 4780920.0 5009820.0 4904860.0 5024680.0 5268120.0 5838960.0 5249890.0 True False 4988959.149473787 4629612.170112928 4918781.252317408 5235297.199363985 5404064.332023415 4874246.949374568 5532623.690551098 5249846.121308457 4778752.052203379 5203380.058952615 0.9587919953857862 0.8897316970240341 0.9453050126243338 1.0061339244971075 1.0385680597606002 0.9367462868656382 1.063274953562542 1.0089299766362243 0.9183938128796402 1.0 22.311017656062425 -5.132684040810319 4.169772863569107 0.9983397517645256 0.92297207341271 0.32466854411259916 0.043201624409694814 0.24822313933458798 7.180306144053656 0.011702223271305047 0.02139945395069129 7.367428999127807e-06 5.132684040810319 -0.07536767835181557 IS(ph)DAELEAELEKLSLSEGGLVPSSK ddPTM_KYSE-520_SHP099_60min_R1 4 ISDAELEAELEKLSLSEGGLVPSSK 25 1 Q8WUX9 Q8WUX9 CHMP7 Charged multivesicular body protein 7 1 IS(1)DAELEAELEKLSLSEGGLVPSSK;IS(1)DAELEAELEKLSLSEGGLVPSSK;IS(1)DAELEAELEKLSLSEGGLVPSSK;IS(1)DAELEAELEKLSLSEGGLVPSSK 177.86 6.5765e-11 805270000.0 479535.0 615108.0 601782.0 392698.0 431025.0 446163.0 317537.0 333780.0 832470.0 393869.0 True False 452934.23762067733 585557.2883840688 640573.8306052443 430019.8998510414 464944.21530322236 443378.331221238 349636.7388224765 332622.1950848374 681314.432860945 390379.6270854453 1.1602404587612873 1.4999688707010919 1.6408997451730163 1.101542882915147 1.1910053267238163 1.1357619620969424 0.89563264720766 0.8520480373634711 1.7452612421083662 1.0 18.574518238736875 -5.284724420977147 24.19679870799129 1.1182584718031896 1.4403296077075305 0.22492429372288147 0.25605875686020146 711.8763258839903 739749.1029098568 0.07162513870248152 0.10632219213645591 5.191293449272119e-06 5.284724420977147 0.3220711359043409 IS(ph)DAHLADTMIGK ddPTM_KYSE-520_SHP099_60min_R1 9 ISDAHLADTMIGK 13 0 Q9Y657 Q9Y657 SPIN1 Spindlin-1 1 IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK;IS(1)DAHLADTMIGK 258.42 3.3749e-22 8230439000.0 10787920.0 10419870.0 9863950.0 9634560.0 10036460.0 9606390.0 9562330.0 10290100.0 11892480.0 9828720.0 True False 10189492.572414631 9919283.804656273 10499795.999878015 10550225.685663905 10826272.302354114 9546432.956700569 10528983.635747438 10254406.044827387 9733105.417024191 9741645.187428452 1.0459724591041484 1.0182349709735952 1.077825746869528 1.0830024582787026 1.1113392136602724 0.979961061302068 1.0808219179790126 1.0526359611270435 0.9991233749289821 1.0 23.215734007269592 -7.749647574410438 5.959457622311194 0.998757819069348 1.0568693219493086 0.2967055926267419 0.03492257538335789 0.18789699685675867 23.676516527032472 0.027965027402614105 0.009010575555564001 1.7797230515064212e-08 7.749647574410438 0.058111502879960586 IS(ph)DPEKWEIK ddPTM_KYSE-520_SHP099_60min_R1 2 ISDPEKWEIK 10 1 F5H658;Q14562 F5H658 DHX8 ATP-dependent RNA helicase DHX8 1 IS(1)DPEKWEIK;IS(1)DPEKWEIK 143.05 0.00014329 659100000.0 1612960.0 1478710.0 1398810.0 1483450.0 1490350.0 1422080.0 1524850.0 1725370.0 1904920.0 1643270.0 True False 1523485.893443955 1407670.5520110389 1488979.5307751328 1624436.641984493 1607632.0660684588 1413204.2712262075 1678996.7191018814 1719385.0941743844 1559034.5471253886 1628711.9062447143 0.9353931088749904 0.8642845592359389 0.9142068189384338 0.9973750641572464 0.9870573548977984 0.8676821639283046 1.030873976339442 1.0556717167609668 0.9572193468641246 1.0 20.63530000548395 -5.522687050426842 0.5035949407033471 1.0089002125598283 0.8797191935944396 0.3083785113975033 0.051460802385010176 1.8600276145774781 0.8314883381513946 0.0426833881658291 0.12493233666225155 3.001324473421806e-06 5.522687050426842 -0.1291810189653887 IS(ph)DS(ph)ESEDPPR ddPTM_KYSE-520_SHP099_60min_R1 2 ISDSESEDPPR 11 0 Q96ST2;Q96ST2-3;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 IS(1)DS(0.963)ES(0.037)EDPPR;IS(1)DS(0.996)ES(0.004)EDPPR 174.72 3.1710999999999996e-07 513140000.0 2364900.0 2088440.0 2036370.0 2070340.0 2171770.0 2226900.0 2133210.0 2321100.0 2592740.0 2267060.0 True False 2233714.282688727 1988108.2075876524 2167637.668507203 2267104.491129583 2342675.9433190185 2213001.09107339 2348855.6849233187 2313048.64584881 2121963.773656572 2246975.6121459906 0.9940981426831784 0.8847929620779884 0.9646912306435692 1.0089582098153564 1.0425907298039736 0.984879888820799 1.0453409784363554 1.0294053185738479 0.944364399055482 1.0 21.099553035441026 -5.131808490307399 3.8157862359707684 1.0111556241999964 0.9367493595374938 0.3589062283645481 0.0372771164246323 0.21936089519657512 5.596212524415523 0.009921133367329481 0.018422533943019757 7.382296935659671e-06 5.131808490307399 -0.07440626466250255 IS(ph)EDETER ddPTM_KYSE-520_SHP099_60min_R1 3 ISEDETER 8 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 IS(1)EDETER;IS(1)EDETER;IS(1)EDETER 145.99 0.00050408 1345450000.0 3099930.0 2567380.0 2384200.0 2854450.0 2843070.0 2712950.0 2923920.0 2995530.0 2738690.0 2953200.0 True False 2927970.7033427516 2444039.2110840534 2537889.3468548763 3125736.069778312 3066803.4341445 2696017.472732296 3219498.368309258 2985139.2055919585 2241412.932756667 2927036.9455548315 1.0003190112749818 0.8349874827496501 0.8670506707163579 1.0678840506353144 1.0477501620886358 0.9210739470940486 1.0999172296743898 1.0198501970142073 0.7657617496631216 1.0 21.481009525126304 -5.243653315033413 24.826333748861067 0.9939709842820407 0.8942058913612008 0.14647029016859148 0.09653169968621925 1333.8189638205765 1861782.1815149328 0.02614465256392279 0.04514673976519511 5.7061959996059285e-06 5.243653315033413 -0.0997650929208399 IS(ph)EDETERNGDDGTHDK ddPTM_KYSE-520_SHP099_60min_R1 3 ISEDETERNGDDGTHDK 17 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 IS(0.984)EDET(0.016)ERNGDDGTHDK;IS(0.939)EDET(0.061)ERNGDDGTHDK;IS(0.803)EDET(0.191)ERNGDDGT(0.006)HDK 112.55 0.00016126 2257490000.0 4667200.0 4713200.0 4324600.0 4606800.0 4517400.0 4279800.0 4174400.0 4611500.0 6016400.0 4092500.0 True False 4408301.112167464 4486770.797342564 4603370.635604654 5044628.886915076 4872893.679509956 4253088.180688793 4596389.090217982 4595503.782832187 4923973.421101768 4056243.633916822 1.0867939675286924 1.1061393748210369 1.1348851427742055 1.2436700904092 1.2013316061107884 1.0485287779871084 1.1331639578512154 1.132945699909707 1.2139244743410647 1.0 21.951712878195867 -6.240367286698413 24.91754258732155 1.1157373814880172 1.1557308331980507 0.10685404972582502 0.06753632320995478 2370.5589403076833 2803162.9752824563 0.023196305342325266 0.0231732217566748 5.749534884002747e-07 6.240367286698413 0.039993451710033545 IS(ph)EGLPTPTKMT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 ISEGLPTPTKMTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 IS(0.908)EGLPT(0.081)PT(0.012)KMT(0.999)PR;IS(0.565)EGLPT(0.373)PT(0.062)KMT(1)PR 212.37 1.5755e-13 3667500000.0 2076200.0 2066200.0 1766950.0 1987110.0 1948720.0 2003250.0 1932250.0 2043850.0 2343600.0 2108280.0 True False 1961029.0471979082 1966936.6505705689 1880850.424219958 2175964.336953595 2102073.177299915 1990746.973682141 2127580.68694272 2036760.3613881744 1918061.3173482663 2089602.2794170196 0.9384699981017526 0.941297140582813 0.9000997188540101 1.0413294234923354 1.0059680724919455 0.9526918080494924 1.0181749454907256 0.9747119733983122 0.9179073626792694 1.0 20.994796945068206 -5.244540927142011 24.99890550811482 0.9868290678195113 0.9280897721367314 0.39892651146645697 0.03408905349909733 891.56197543941 1318940.2810771698 0.00944712616247286 0.01630832991360241 5.694545572113511e-06 5.244540927142011 -0.05873929568277991 IS(ph)FFLEK ddPTM_KYSE-520_SHP099_60min_R1 4 ISFFLEK 7 0 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 IS(1)FFLEK;IS(1)FFLEK;IS(1)FFLEK;IS(1)FFLEK 125.48 0.0022754000000000003 446672000.0 688666.0 569194.0 605026.0 594021.0 554539.0 526901.0 595224.0 662218.0 736736.0 635190.0 True False 650464.324158365 541849.0658623878 644026.9440358267 650476.5772410743 598178.0644046951 523612.4154149985 655395.050746433 659920.9203208437 602963.3140031965 629562.7107703415 1.0332002087011285 0.8606752855476049 1.02297504762915 1.0332196715481168 0.9501484985868307 0.8317081149458475 1.0410321951001238 1.0482211049529213 0.957749408737062 1.0 19.263990566457746 IS(ph)FVEEDVHPK ddPTM_KYSE-520_SHP099_60min_R1 12 ISFVEEDVHPK 11 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK;IS(1)FVEEDVHPK 217.2 6.349699999999999e-10 8728310000.0 8543280.0 7124510.0 6693900.0 6885460.0 7034850.0 7883490.0 9337890.0 11427750.0 11497700.0 9615360.0 True False 8069367.22779354 6782237.845492474 7125399.504618681 7539852.048210973 7588452.672178827 7834286.214677858 10281855.050224122 11388109.802506914 9410007.51343026 9530175.391036889 0.8467175992776339 0.7116592892793091 0.7476671952249804 0.7911556439246846 0.7962553007487934 0.8220505807318078 1.0788736438045188 1.194952803619691 0.9873908010423769 1.0 23.1840713347134 -6.72315172293848 4.294819239857395 1.084050035177463 0.7774815961631572 0.8257643873934285 0.06285929324897954 0.0760539265009848 3.051310705262002 0.025175444025177476 0.01837158392608882 1.8916826344505056e-07 6.72315172293848 -0.30656843901430575 IS(ph)GLIYEETR ddPTM_KYSE-520_SHP099_60min_R1 4 ISGLIYEETR 10 0 P62805 P62805 HIST1H4A Histone H4 1 IS(1)GLIYEETR;IS(1)GLIYEETR;IS(1)GLIYEETR;IS(1)GLIYEETR 148.18 0.00017386 333072000.0 290577.0 254364.0 226619.0 209016.0 232744.0 236080.0 227624.0 265469.0 262333.0 229581.0 True False 274458.11455911124 242143.97163185227 241227.22334321996 228880.81779704825 251059.62866778809 234606.53715057054 250634.45531616017 264548.1499999304 214699.94007677212 227547.0909513152 1.20615962793316 1.0641488345094254 1.0601200056424 1.0058613223318176 1.1033304254436878 1.0310241109642038 1.1014619183586252 1.1626083589727445 0.9435406938369 1.0 17.795805616897876 -4.260840050154334 5.2601965061099305 1.0583627118496797 1.2124424265309808 0.37584435332806443 0.0590288680798923 0.16942201377567787 16.447565017309508 0.014104829241152942 0.09463616036641437 5.484789314915695e-05 4.260840050154334 0.1540797146813011 IS(ph)IGSLFR ddPTM_KYSE-520_SHP099_60min_R1 1 ISIGSLFR 8 0 Q9NV58-2;Q9NV58-3;Q9NV58;A0A0C4DGD6;A3KCU8;E7EQ63;E7EQV8;E7ETB2 Q9NV58-2 RNF19A;RNF19 E3 ubiquitin-protein ligase RNF19A 1 IS(1)IGSLFR 82.029 0.0087576 22999000.0 32739.0 34982.0 30202.0 33443.0 31912.0 33920.0 35489.0 34789.0 40166.0 32115.0 True False 30922.902406421534 33301.41221094748 32148.86924490859 36621.41266499541 34423.29284555755 33708.292698014884 39076.57445926265 34668.32507881363 32872.86690246225 31830.48608509191 0.9714869676748213 1.0462112366717669 1.0100024598733917 1.1505137737166815 1.0814567127103978 1.05899396597033 1.2276461740106606 1.0891547488824196 1.0327478761896303 1.0 14.958121568166291 -5.238188834808518 23.769158643749837 1.099116305237753 1.0129312885499189 0.26467553644575204 0.061842623267433824 556.4893347373159 568900.078992161 0.016649169402608126 0.028805224106586105 5.778447411341452e-06 5.238188834808518 -0.08618501668783418 IS(ph)IPDVDLDLK ddPTM_KYSE-520_SHP099_60min_R1 1 ISIPDVDLDLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)IPDVDLDLK 137.16 0.00010763 39347000.0 140080.0 149410.0 123600.0 126550.0 144600.0 140050.0 131440.0 155890.0 175370.0 139130.0 True False 132309.48315744314 142232.11933101772 131567.45376699217 138577.27395135522 155979.19733854439 139175.8960010904 144727.2379307807 155349.25397499956 143527.22871794066 137897.41644150222 0.959477607135377 1.0314342574456739 0.9540965825331811 1.004930168580362 1.1311248706730679 1.0092712364928935 1.0495282773638894 1.1265566678756496 1.0408260895796164 1.0 17.073235902123017 -5.542123047796468 24.786489464082788 1.0633333243107752 0.9854571860838576 0.3892005033702548 0.04471708425438123 208.40269578498655 268419.2610130832 0.0126571830065109 0.01634260867892997 2.8699673246558937e-06 5.542123047796468 -0.07787613822691763 IS(ph)IPDVDLDLKGPK ddPTM_KYSE-520_SHP099_60min_R1 2 ISIPDVDLDLKGPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)IPDVDLDLKGPK;IS(1)IPDVDLDLKGPK 153.86 1.029e-06 497490000.0 964160.0 1082700.0 1000940.0 880920.0 888190.0 1043840.0 777410.0 877060.0 1291810.0 847010.0 True False 910676.12279469 1030685.4668341688 1065462.1939606245 964642.3719417432 958085.499890191 1037325.0073672123 855998.1895904477 874017.6835673435 1057249.8678800412 839506.1503638092 1.0847759988417458 1.2277283095394953 1.2691535297256544 1.1490593267526448 1.1412489348350743 1.2356371742097139 1.0196449296047343 1.041109327416575 1.259371199867768 1.0 19.679181369065304 -6.756363808186911 24.999838770006498 1.0834571404487354 1.1868181776322597 0.27633050325667974 0.08278112585972378 174.45237583788366 859274.6070756488 0.03207771834575852 0.02406935331206896 1.7524118925716137e-07 6.756363808186911 0.1033610371835243 IS(ph)LNSLCYGDMDK ddPTM_KYSE-520_SHP099_60min_R1 1 ISLNSLCYGDMDK 13 0 A0A087WYQ3;H0YB26;O75131 A0A087WYQ3 CPNE3 Copine-3 1 IS(0.998)LNS(0.002)LCYGDMDK 112.67 0.00014743 139020000.0 193110.0 182440.0 163610.0 174690.0 176400.0 209160.0 172980.0 200420.0 267500.0 199670.0 True False 182397.80334475896 173675.30855197707 174156.5623852555 191292.48507753626 190281.67642129477 207854.55485603734 190466.50652211232 199724.78979837953 218928.74312624236 197901.07914090945 0.9216614893488688 0.8775864654498263 0.8800182552883029 0.9666065789430701 0.9614989329381599 1.050295206869695 0.9624328848985024 1.0092152638347744 1.1062534073922903 1.0 17.594419953760053 -5.696477943103601 1.2756535716727737 1.024083030598789 0.8893335382627229 0.6660482753227176 0.0393803755643411 0.270821029822695 0.9220610219370545 0.015478814353589382 0.023715114934024038 2.011509355904187e-06 5.696477943103601 -0.13474949233606603 IS(ph)LPSDFQHK ddPTM_KYSE-520_SHP099_60min_R1 3 ISLPSDFQHK 10 0 Q5TCX8;Q5TCX8-2;G3V4P9;G3V347;A0A087WW79;J3KPI6;P80192;P80192-4 Q5TCX8;G3V4P9 MLK4;MAP3K9 Mitogen-activated protein kinase kinase kinase MLK4;Mitogen-activated protein kinase kinase kinase 9 1 IS(1)LPSDFQHK;IS(1)LPSDFQHK;IS(1)LPSDFQHK 211.22 3.5659000000000003e-09 1309240000.0 944550.0 1045079.0 918675.0 1286680.0 1052000.0 1024642.0 955486.0 1079230.0 1200230.0 1029520.0 True False 892153.9285862559 994871.8361444395 977894.2604319707 1408965.680345553 1134786.4149387875 1018246.8292063476 1052075.8495247266 1075486.4030241752 982298.487336111 1020399.253754441 0.8743184839695626 0.9749829123099842 0.9583447428385721 1.3807984229324224 1.1121003967451681 0.9978906055250689 1.031043334904191 1.0539858776523476 0.9626609228905817 1.0 19.9607023182957 -5.029225765741063 24.951803003515536 1.0826769961868465 0.9351537663219649 0.2489574603299628 0.11267062833127012 950.7848090960695 811742.3681975433 0.03225947011300703 0.056002112256315094 9.349195347134893e-06 5.029225765741063 -0.14752322986488164 IS(ph)MPDFDLHLK ddPTM_KYSE-520_SHP099_60min_R1 3 ISMPDFDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)MPDFDLHLK;IS(1)MPDFDLHLK;IS(1)MPDFDLHLK 184.11 7.297399999999999e-07 599379400.0 1576482.0 1100406.0 907468.0 821938.0 838672.0 890437.0 787669.0 855255.0 994479.0 846574.0 True False 1489031.400821045 1047540.8440169208 965964.8392801367 900054.7403953288 904670.7150090694 884879.4523921657 867294.2694286376 852288.3200230183 813906.6823754847 839074.0129846049 1.7746127013569724 1.248448680100096 1.1512272151585035 1.0726762198173843 1.0781774921036293 1.054590463652461 1.0336326188242353 1.0157486787028593 0.9700058275912998 1.0 19.678438547862783 -1.0083484934355187 0.810017019844304 1.0248677651219653 199.999938799294 0.9817884600441348 0.030341884311347295 64.50060081741138 0.21703508563121274 0.011329053358691287 23567.905886666158 0.09809604693249008 1.0083484934355187 198.97507103417203 IS(ph)MPDIDFNLK ddPTM_KYSE-520_SHP099_60min_R1 1 ISMPDIDFNLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)MPDIDFNLK 86.31299999999999 0.0035075 68401000.0 150050.0 150310.0 107350.0 103780.0 113620.0 114250.0 106970.0 116070.0 125630.0 129520.0 True False 141726.42738274072 143088.8819800901 114269.95276607286 113643.21999740535 122561.24759063209 113536.92337111423 117783.57152659491 115667.38026094173 102818.75887457881 128372.55356503524 1.1040243685028843 1.1146376542833152 0.8901431777485223 0.8852610378263777 0.9547309310828731 0.8844330054834885 0.9175136604798018 0.9010288963547266 0.8009403569470125 1.0 16.969977257362192 -4.760408445247198 24.999981510322932 0.9016114415239478 1.109331088892704 0.7398553996365649 0.04862114723372643 11.679663366739264 283191.9520182156 0.011997657141402506 0.028262983423557618 1.7361672302382838e-05 4.760408445247198 0.20771964736875614 IS(ph)MPDLDLHLK ddPTM_KYSE-520_SHP099_60min_R1 4 ISMPDLDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)MPDLDLHLK;IS(1)MPDLDLHLK;IS(1)MPDLDLHLK;IS(1)MPDLDLHLK 194.98 3.943e-07 290731000.0 634181.0 648310.0 533643.0 495047.0 500142.0 536293.0 410122.0 478036.0 564572.0 481633.0 True False 599001.7157215186 617164.2144668503 568042.4816389892 542096.1180386926 539500.3299812879 532945.7964592121 451581.1341650011 476377.804690441 462059.95650193945 477366.1063248036 1.254805709465165 1.2928530247326084 1.1899514316428839 1.1355982564665918 1.1301605263407781 1.1164299044234858 0.9459849121708314 0.9979296778274196 0.9679362451165526 1.0 18.864736611084812 -5.833953069631917 0.6199251041791292 0.964874136149198 1.2937850949778111 0.8915165213482923 0.038009566476768106 0.27939669641563 0.22975425853630596 0.027899226855496492 0.0493558327322248 1.4657062183214368e-06 5.833953069631917 0.3289109588286131 IS(ph)MPDVDLHLK ddPTM_KYSE-520_SHP099_60min_R1 4 ISMPDVDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)MPDVDLHLK;IS(1)MPDVDLHLK;IS(1)MPDVDLHLK;IS(1)MPDVDLHLK 169.17 9.011100000000001e-06 510383000.0 892830.0 912200.0 796420.0 753963.0 725466.0 869810.0 720283.0 747278.0 915840.0 843180.0 True False 843302.9400875204 868376.542759885 847758.5075170546 825619.4168327574 782556.0468630998 864381.1931503639 793096.2349246554 744685.8670339958 749546.5424476169 835710.0811841142 1.0090855179019116 1.039088270335911 1.0144169929311717 0.9879256400293037 0.936396562016219 1.0343074860669692 0.9490088163121361 0.8910815889391371 0.896897811003533 1.0 19.672643013656526 -6.154103609745851 0.717726697472479 0.9269166809258207 1.0241615484809414 0.368957919892396 0.04084199784078527 0.7283560112023669 0.8313158521172662 0.02969472490754206 0.03340893725658309 7.012879720099999e-07 6.154103609745851 0.09724486755512074 IS(ph)MQDVDLS(ph)LGSPK ddPTM_KYSE-520_SHP099_60min_R1 1 ISMQDVDLSLGSPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 IS(1)MQDVDLS(0.5)LGS(0.5)PK 81.865 0.007587600000000001 15711000.0 33955.0 31249.0 167680.0 22011.0 51571.0 29040.0 23833.0 23842.0 87872.0 44840.0 True False 32071.44846238561 29747.75113429472 178488.92109748584 24102.918822151554 55629.344301148456 28858.75058815894 26242.2722276651 23759.297666764633 71916.65987285665 44442.752484992125 0.7216350623921374 0.669349882060978 4.016153615997564 0.542336319747317 1.2517078981535612 0.6493466082665391 0.5904736039138633 0.5346045494096683 1.6181864500211185 1.0 15.439660549865053 IS(ph)MSEVDLNVAAPK ddPTM_KYSE-520_SHP099_60min_R1 17 ISMSEVDLNVAAPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(1)MSEVDLNVAAPK;IS(1)MSEVDLNVAAPK;IS(0.999)MS(0.001)EVDLNVAAPK;IS(1)MSEVDLNVAAPK;IS(1)MSEVDLNVAAPK;IS(0.974)MS(0.026)EVDLNVAAPK;IS(1)MSEVDLNVAAPK;IS(0.928)MS(0.072)EVDLNVAAPK;IS(0.943)MS(0.057)EVDLNVAAPK;IS(0.974)MS(0.026)EVDLNVAAPK;IS(0.999)MS(0.001)EVDLNVAAPK;IS(1)MSEVDLNVAAPK;IS(1)MSEVDLNVAAPK;IS(0.999)MS(0.001)EVDLNVAAPK;IS(1)MSEVDLNVAAPK;IS(0.998)MS(0.002)EVDLNVAAPK;IS(0.998)MS(0.002)EVDLNVAAPK 348.19 2.267e-54 23879154000.0 10073395.0 10352380.0 9731145.0 8919975.0 9252640.0 9829614.0 9996733.0 11756490.0 13632310.0 12788390.0 True False 9514603.698534913 9855036.125560818 10358430.177082513 9767726.742111726 9980770.12767985 9768263.73291583 11007300.330352155 11715709.48017539 11157026.146569364 12675094.813816879 0.7506534537448372 0.7775118269583302 0.8172270368968748 0.7706235642090908 0.7874315951309495 0.7706659300305693 0.86841956545787 0.9243094156111811 0.8802321647651348 1.0 23.59549320330696 -7.432455415925436 0.703712643024852 0.9895827333776185 0.7725060492454152 0.8607626222543514 0.02881787762184103 0.23472448085798653 0.2357066924302023 0.027986569723772215 0.012903130910202008 3.6944056867259586e-08 7.432455415925436 -0.21707668413220327 IS(ph)NCCIHR ddPTM_KYSE-520_SHP099_60min_R1 3 ISNCCIHR 8 0 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 IS(1)NCCIHR;IS(1)NCCIHR;IS(1)NCCIHR 126.48 0.00056944 1312440000.0 709940.0 699880.0 637370.0 752610.0 778300.0 688060.0 706030.0 761590.0 783900.0 734350.0 True False 670558.2129696963 666256.7142587021 678455.8900280576 824137.8281195518 839547.7820787611 683765.5623171026 777402.4025887798 758948.222046443 641563.5205108828 727844.2303156554 0.9212935749712339 0.9153836583546955 0.9321443542031257 1.1322997336423692 1.1534717829866723 0.9394394210153504 1.0680889814179495 1.0427344072196578 0.8814571769465648 1.0 19.473270199315422 -5.095666555268319 9.622210909768343 1.035632290169354 0.9196822128124758 0.29489612572083046 0.07658337066293928 0.5023726926251052 47.23268835756541 0.021433993571584094 0.03721063870661347 8.022938160266926e-06 5.095666555268319 -0.11595007735687823 IS(ph)PDLNIK ddPTM_KYSE-520_SHP099_60min_R1 10 ISPDLNIK 8 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 IS(1)PDLNIK;IS(1)PDLNIK;IS(1)PDLNIK;IS(1)PDLNIK;IS(1)PDLNIK;IS(1)PDLNIK;IS(1)PDLNIK;IS(1)PDLNIK;IS(1)PDLNIK;IS(1)PDLNIK 168.46 0.00014743 8234052000.0 12708510.0 11268440.0 11262510.0 10104140.0 10963200.0 10542750.0 10685310.0 12316080.0 13362120.0 11230800.0 True False 12003543.616513401 10727087.22812672 11988509.415253146 11064434.427679533 11825941.467924807 10476948.786615452 11765485.41337608 12273358.393074684 10935895.839633733 11131303.849430189 1.0783591732722184 0.9636864982960499 1.0770085497097304 0.9939926694432946 1.0624039760203094 0.941214877280685 1.0569728014367656 1.1025984519956264 0.9824451823039169 1.0 23.408119254819102 IS(ph)PEQHWDFTAEDLKDLGEIGR ddPTM_KYSE-520_SHP099_60min_R1 1 ISPEQHWDFTAEDLKDLGEIGR 22 1 P45985;P45985-2 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 1 IS(1)PEQHWDFTAEDLKDLGEIGR 154.63 1.5722999999999999e-07 249780000.0 106030.0 107880.0 81435.0 89114.0 90920.0 84409.0 77909.0 81695.0 111300.0 90356.0 True False 100148.30453443532 102697.28286881867 86684.43040060684 97583.367766899 98074.88673596419 83882.17212107114 85784.80203856666 81411.61911275637 91090.72564467574 89555.51613590437 1.1182818083752197 1.1467443581361432 0.9679407158913524 1.0896410626321669 1.0951294902608937 0.9366499769123804 0.9578952334815927 0.9090631445773895 1.0171425454847653 1.0 16.45049467671681 -6.259381567339105 24.999999693050597 0.9580756900100004 1.0809743614556637 0.5685739242582424 0.05184350442540365 137.4997377625314 1670465.5891540088 0.017802636324650126 0.01697931889221361 5.503239741017595e-07 6.259381567339105 0.12289867144566335 IS(ph)PEQVDTSSLPLVPQHSFASLPLNESER ddPTM_KYSE-520_SHP099_60min_R1 3 ISPEQVDTSSLPLVPQHSFASLPLNESER 29 0 Q9C0D2-3;Q9C0D2 Q9C0D2-3 CEP295 Centrosomal protein of 295 kDa 1 IS(1)PEQVDTSSLPLVPQHSFASLPLNESER;IS(1)PEQVDTSSLPLVPQHSFASLPLNESER;IS(1)PEQVDTSSLPLVPQHSFASLPLNESER 162.69 3.5023999999999997e-10 581531000.0 98619.0 94688.5 102583.2 87970.0 100962.0 121018.9 70141.7 84803.0 132323.2 100251.4 True False 93148.40747789749 90139.52232966392 109195.87721092343 96330.64235085496 108907.13500480015 120263.57615541824 77232.30755302373 84508.83818616907 108296.64247642003 99363.25059040888 0.9374533031519877 0.9071716333157553 1.0989563703088399 0.9694795790039639 1.0960504447839843 1.2103426109836506 0.7772723526466297 0.850503960810702 1.0899063973141945 1.0 16.600424750510758 IS(ph)PIQKPQGLDPVEILQER ddPTM_KYSE-520_SHP099_60min_R1 2 ISPIQKPQGLDPVEILQER 19 1 P51531;P51531-2;F6VDE0;A0A0U1RQZ9;A0A0U1RRJ8 P51531 SMARCA2 Probable global transcription activator SNF2L2 1 IS(1)PIQKPQGLDPVEILQER;IS(1)PIQKPQGLDPVEILQER 200.98 2.1116999999999997e-13 733970000.0 621150.0 536220.0 557180.0 495810.0 519160.0 523930.0 487950.0 572260.0 670450.0 566210.0 True False 586693.5712681734 510459.1863173704 593096.7143195207 542931.6333292882 560014.9383836689 520659.9585280341 537276.7479330837 570274.9636264876 548713.1806691177 561193.8199047137 1.0454384037368576 0.9095951669675236 1.0568482639745105 0.9674583255772021 0.9978993326739682 0.9277720816961921 0.9573817972983186 1.0161818313026254 0.9777605547443216 1.0 19.09813959593576 -7.266771734829091 24.923607635662584 0.9977283916930744 0.9787212804420236 0.03133489132658884 0.04429861229952223 1734.3486218092416 8106364.8874667995 0.022286362333144627 0.011200117083033374 5.410386181130116e-08 7.266771734829091 -0.019007111251050812 IS(ph)PIYGK ddPTM_KYSE-520_SHP099_60min_R1 2 ISPIYGK 7 0 Q9BX63;Q9BX63-2;J3QQP5 Q9BX63 BRIP1 Fanconi anemia group J protein 1 IS(0.999)PIY(0.001)GK;IS(1)PIYGK 125.82 0.0022593000000000005 813760000.0 1538400.0 1397820.0 1323930.0 1426350.0 1466090.0 1456550.0 1476090.0 1404820.0 1566660.0 1589850.0 True False 1453061.8852756321 1330666.6290294058 1409272.6461628964 1561909.8751522359 1581462.942088978 1447459.1311702111 1625307.5824501398 1399947.007307452 1282194.036284705 1575765.1658845816 0.9221309854631365 0.8444574469841223 0.8943417944968838 0.9912072616958962 1.0036158790203982 0.9185754086381622 1.0314402283018782 0.888423629114538 0.8136961420675424 1.0 20.58762111727995 -5.087432058602791 7.060450188773765 0.949107053977209 0.8799174085683742 0.17106477571653167 0.06333167621832676 0.4428271498313377 30.713115267155466 0.017825064953462377 0.03122909277447018 8.17650941945746e-06 5.087432058602791 -0.06918964540883477 IS(ph)PPIKEEETK ddPTM_KYSE-520_SHP099_60min_R1 5 ISPPIKEEETK 11 1 H0YJA2;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-11;G3V5I6;A0A087WTC9;Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4 H0YJA2;Q6PJT7-5 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 IS(1)PPIKEEETK;IS(1)PPIKEEETK;IS(1)PPIKEEETK;IS(1)PPIKEEETK;IS(1)PPIKEEETK 150.76 3.5341e-05 4139800000.0 6258000.0 5145330.0 4695910.0 5577200.0 5607570.0 5538310.0 5894470.0 6481500.0 6235600.0 5717580.0 True False 5910856.2649862915 4898140.6235022135 4998615.872321659 6107255.411153684 6048853.856291153 5503743.352958214 6490340.552083456 6459017.189293477 5103372.226684097 5666926.689409927 1.043044420537892 0.8643380957540208 0.8820682084458275 1.07770150310337 1.067395819253309 0.9712042619579564 1.145301661341814 1.1397742627169978 0.9005537756860393 1.0 22.434135108367897 -5.265498636237497 24.735572649099836 1.0512279131269628 0.923269025134181 0.27685206457937106 0.08300594596429944 344.7642332643078 2100868.2009121473 0.0229881804846111 0.03555363932653651 5.426269552722223e-06 5.265498636237497 -0.12795888799278188 IS(ph)PPIKEEETKGDSVEK ddPTM_KYSE-520_SHP099_60min_R1 9 ISPPIKEEETKGDSVEK 17 2 H0YJA2;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-11;G3V5I6;A0A087WTC9;Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4 H0YJA2;Q6PJT7-5 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 IS(1)PPIKEEETKGDSVEK;IS(1)PPIKEEETKGDSVEK;IS(1)PPIKEEETKGDSVEK;IS(0.99)PPIKEEET(0.009)KGDS(0.001)VEK;IS(1)PPIKEEETKGDSVEK;IS(0.999)PPIKEEET(0.001)KGDSVEK;IS(1)PPIKEEETKGDSVEK;IS(1)PPIKEEETKGDSVEK;IS(1)PPIKEEETKGDSVEK 186.06 2.5271e-12 32118250000.0 8158070.0 7272120.0 7003250.0 6820200.0 7056570.0 6867450.0 6771880.0 7194510.0 8693290.0 7003120.0 True False 7705525.594390651 6922756.439525338 7454690.700596192 7468389.757432096 7611881.912608932 6824587.697198768 7456447.717579851 7169553.924021259 7114807.676007223 6941077.805144921 1.1101338741195352 0.99736044370429 1.073996129977187 1.0759697509652344 1.096642643447505 0.9832172882632425 1.074249263140794 1.0329165189168439 1.0250292354788948 1.0 22.726728270082482 -7.694169643520765 0.47401149398960324 0.9986417962907954 1.0647262670236863 0.22992730200219025 0.03741975502172248 1.5542707868780608 0.9182685302756124 0.04203111734538654 0.02458651232705255 2.022229103992878e-08 7.694169643520765 0.06608447073289092 IS(ph)PPLPFLSLSGGGPR ddPTM_KYSE-520_SHP099_60min_R1 2 ISPPLPFLSLSGGGPR 16 0 H3BNC9;A0A0J9YXP0;A0A087X171;A0A087WVR7;A0A087WXG7;A0A024R214;Q9BZB8-4;Q9BZB8-2;Q9BZB8-3;Q9BZB8 H3BNC9 CPEB1 Cytoplasmic polyadenylation element-binding protein 1 1 IS(1)PPLPFLSLSGGGPR;IS(1)PPLPFLSLSGGGPR 80.706 0.0077634 165118000.0 68144.0 81528.0 69548.0 66995.0 67860.0 71755.0 64042.0 78956.0 96365.0 75038.0 True False 64363.91647830381 77611.27250397716 74031.17536073449 73362.18465721882 73200.19592941631 71307.15042883425 70515.9903496886 78682.12006446895 78867.54516396392 74373.22169868067 0.8654178884312816 1.0435378585375161 0.9954009476780236 0.9864058996185748 0.9842278478399549 0.9587745266398644 0.9481368258508492 1.0579361531929539 1.0604293233859328 1.0 16.18249564770222 -7.2674256161082615 24.697403724920118 1.0443870585751733 0.9736174021736586 0.3317028857375067 0.045417365430652064 483.02806161698277 1992808.840857807 0.023255938048795426 0.011636391589017019 5.4022463394526815e-08 7.2674256161082615 -0.07076965640151478 IS(ph)PSSLSNNYNNMNNR ddPTM_KYSE-520_SHP099_60min_R1 2 ISPSSLSNNYNNMNNR 16 0 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 IS(0.991)PS(0.008)SLSNNYNNMNNR;IS(0.988)PS(0.009)S(0.003)LSNNYNNMNNR 164.63 5.4441e-08 2725900000.0 1807980.0 1983180.0 1555180.0 1637500.0 1641420.0 1745150.0 1413990.0 1859470.0 2175470.0 1740970.0 True False 1707687.7452812241 1887905.0559861294 1655429.3911759795 1793127.5076676733 1770590.41559774 1734257.8715194752 1556929.908412545 1853019.9325735616 1780459.4871358755 1725546.360254165 0.9896504577423754 1.0940911814783405 0.9593653519295433 1.039165071985405 1.0261042278440669 1.0050485524272017 0.9022822824552893 1.073874324825802 1.03182361723021 1.0 20.718621804506057 -4.767147671543618 24.998273996135527 1.0056951773417142 1.0418708145931537 0.08037023195285242 0.050194947794413435 342.0481799039328 1497953.5507701247 0.01303655656482714 0.028405775214613037 1.709433963761286e-05 4.767147671543618 0.03617563725143946 IS(ph)PSVLR ddPTM_KYSE-520_SHP099_60min_R1 4 ISPSVLR 7 0 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 IS(0.51)PS(0.49)VLR;IS(0.871)PS(0.129)VLR;IS(0.5)PS(0.5)VLR;IS(0.803)PS(0.197)VLR 185.72 0.0001134 1229910000.0 1466210.0 1329780.0 1125700.0 1262090.0 1327070.0 1298230.0 1281310.0 1339920.0 1409530.0 1359790.0 True False 1384876.4084828265 1265895.372759527 1198264.4231836817 1382038.6541388056 1431502.8590045786 1290127.2650160328 1410837.3191805298 1335272.1302596778 1153594.883359748 1347743.318500611 1.0275520490233458 0.9392703754360725 0.8890894925873368 1.0254464890809838 1.0621479916495906 0.9572499802494461 1.0468145527518637 0.9907466146782254 0.8559455406116524 1.0 20.362114326684 -4.221754861911456 21.50482538068084 0.9772383924806025 1.0275528080922118 0.05929983942020478 0.06276811150374903 11611.60129894121 6291476.27104883 0.01611006594380592 3.244133623521372 6.001297246795544e-05 4.221754861911456 0.05031441561160932 IS(ph)QEHLADHFDSR ddPTM_KYSE-520_SHP099_60min_R1 1 ISQEHLADHFDSR 13 0 V9GY71;V9GYH5;P19174;P19174-2 V9GY71 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 1 IS(1)QEHLADHFDSR 160.27 7.444499999999999e-07 333480000.0 330710.0 295890.0 269320.0 409620.0 321500.0 319980.0 304060.0 294850.0 346020.0 282600.0 True False 312364.8570459597 281675.00026005565 286680.79812723584 448550.16164325643 346800.2209152279 317982.88612944563 334797.3521396318 293827.2341685074 283191.49045436404 280096.38385947293 1.1152048903375924 1.005635975655347 1.023507673241031 1.6014136114956 1.238146012942534 1.1352623755720486 1.1952933755389106 1.0490218763978165 1.0110501483533751 1.0 18.095563832280927 -7.355799618499483 2.664924643504827 1.0061231953273193 1.1918799971318295 0.19802785916572985 0.15570211650446666 0.541668365571246 7.315720152156284 0.11741833020014705 0.04732384555386953 4.40758180419838e-08 7.355799618499483 0.18575680180451015 IS(ph)QLEMAR ddPTM_KYSE-520_SHP099_60min_R1 1 ISQLEMAR 8 0 P26038 P26038 MSN Moesin 1 IS(1)QLEMAR 60.49 0.034321 68286000.0 26161.0 21175.0 26209.0 23045.0 24926.0 25558.0 23559.0 22263.0 31905.0 24132.0 True False 24709.79717933944 20157.721215677015 27898.47407588268 25235.189871268114 26887.53439046026 25398.483041741278 25940.573633682794 22185.774849223268 26111.856259599088 23918.2092544119 1.0330956183428124 0.8427771912714898 1.1664114892186834 1.0550618402426297 1.1241449602043532 1.061888988911506 1.0845533358187278 0.9275683899759731 1.0917145168291624 1.0 14.545821759198772 -4.759388757458275 24.9999966363223 1.0638302844263148 0.9379364365266567 0.3112218804684429 0.07496706501235764 59.83523033036365 729424.7341326877 0.018715319831137295 0.044720235186667734 1.74024839760762e-05 4.759388757458275 -0.12589384789965807 IS(ph)S(ph)KSPGHMVILDQTK ddPTM_KYSE-520_SHP099_60min_R1 3 ISSKSPGHMVILDQTK 16 1 Q9NWH9;Q9NWH9-3 Q9NWH9 SLTM SAFB-like transcription modulator 2 IS(0.667)S(0.667)KS(0.667)PGHMVILDQTK;IS(0.671)S(0.725)KS(0.604)PGHMVILDQTK;IS(0.784)S(0.906)KS(0.31)PGHMVILDQTK 207.56 4.8376999999999995e-14 4213010000.0 5077300.0 4863900.0 4270040.0 5186800.0 4776300.0 4681300.0 4707800.0 5384500.0 5510400.0 5108500.0 True False 4795652.047653384 4630230.943137259 4545293.61070556 5679751.912531718 5152167.636570459 4652082.270259935 5183710.367700324 5365822.426251744 4509850.265879797 5063242.66435286 0.9471503472303597 0.9144793663033046 0.8977040825449949 1.1217617422367123 1.0175628501560203 0.9187950447274335 1.0237925991964798 1.0597600751054574 0.8907039549241527 1.0 22.271630198795876 IS(ph)SEKQEAK ddPTM_KYSE-520_SHP099_60min_R1 2 ISSEKQEAK 9 1 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 IS(0.744)S(0.256)EKQEAK;IS(0.5)S(0.5)EKQEAK 196.15 2.1387999999999997e-06 1830200000.0 2227080.0 2019480.0 2007770.0 2135990.0 2166440.0 2120160.0 1954960.0 1770310.0 2368210.0 2351440.0 True False 2103539.4328260864 1922461.149498723 2137194.066745585 2338993.847391188 2336926.502642571 2106927.2950065816 2152586.435370963 1764169.2078034584 1938202.761715879 2330608.0709926356 0.9025710753375029 0.8248753505259777 0.9170113556825222 1.0035981066499013 1.0027110657208205 0.9040247140778219 0.9236157988821129 0.756956619931414 0.8316296445718451 1.0 21.152274981952246 -9.644738562123297 7.148978969201584 1.0000009353157269 0.8980521825179397 0.15437227247431318 0.07268921808526943 0.0 0.0 0.07886869463799018 0.019128468149824635 2.26600799528854e-10 9.644738562123297 -0.10194875279778715 IS(ph)SIYAR ddPTM_KYSE-520_SHP099_60min_R1 4 ISSIYAR 7 0 G8JLG1;Q14683;V9GY57 G8JLG1 SMC1A Structural maintenance of chromosomes protein;Structural maintenance of chromosomes protein 1A 1 IS(0.911)S(0.089)IYAR;IS(0.5)S(0.5)IYAR;IS(0.942)S(0.058)IYAR;IS(0.957)S(0.043)IYAR 164.96 0.0017373000000000002 509070000.0 996220.0 921330.0 879340.0 877270.0 867173.0 843140.0 887024.0 869250.0 1056240.0 966780.0 True False 940957.6906846658 877067.923855476 936023.6633937451 960645.4770391566 935414.5815605618 837877.650513097 976693.0424399943 866234.7746344741 864453.441643597 958215.0813434591 0.9819900657015358 0.9153142555696251 0.9768408801095045 1.0025363780460332 0.9762052380234613 0.8744150106032105 1.01928373019409 0.9040087048306267 0.9021496931895455 1.0 19.869989994657473 IS(ph)SKS(ph)PGHMVILDQTK ddPTM_KYSE-520_SHP099_60min_R1 2 ISSKSPGHMVILDQTK 16 1 Q9NWH9;Q9NWH9-3 Q9NWH9 SLTM SAFB-like transcription modulator 2 IS(0.957)S(0.227)KS(0.816)PGHMVILDQTK;IS(0.776)S(0.261)KS(0.963)PGHMVILDQTK 197.69 1.4046e-12 3296570000.0 3783970.0 3672480.0 3329270.0 3751200.0 3274440.0 3136090.0 3285850.0 3740600.0 4017430.0 3430120.0 True False 3574065.6409428157 3496048.5482951356 3543880.0712203444 4107712.920160599 3532119.798984942 3116516.4990364816 3618015.7848056583 3727624.731662604 3287965.98316882 3399731.8053929755 1.0512787024180248 1.0283306885411883 1.0423998933088507 1.2082461662548079 1.0389407168477114 0.9166948093060662 1.0642062350525474 1.0964467037516 0.967125106149002 1.0 21.69698951030752 -5.990685610317051 24.997820900237297 1.0138725987561368 1.0817927288509561 0.21931355048591772 0.06519572107817005 362.92585201211693 974008.5167444884 0.021217213455458135 0.02402819589327222 1.0216788185589733e-06 5.990685610317051 0.06792013009481934 IS(ph)TPERK ddPTM_KYSE-520_SHP099_60min_R1 1 ISTPERK 7 1 A0A669KB77;P11137-3;P11137 A0A669KB77 MAP2 Microtubule-associated protein 2 1 IS(0.5)T(0.5)PERK 69.954 0.021637 0.0 395820.0 326510.0 344960.0 303810.0 333410.0 306840.0 297850.0 328470.0 411100.0 289700.0 True False 373863.0755523923 310823.96949849866 367196.6735555153 332684.0110561931 359647.47015659796 304924.8977434811 327959.58473587217 327330.6142354746 336454.6029876571 287133.48338318925 1.3020532163205065 1.0825068739325454 1.278836133038093 1.1586388572182476 1.2525445166443245 1.0619621722644885 1.1421850940950664 1.1399945780570668 1.1717707005931008 1.0 18.13136205121739 -6.258518975336849 24.990873772345022 1.1143698317736905 1.2079844806015185 0.35728782755094923 0.073882544298511 335.08786108058047 2867474.331304726 0.02337041898104922 0.02236994591874914 5.51418109114644e-07 6.258518975336849 0.093614648827828 IS(ph)TPLTGVR ddPTM_KYSE-520_SHP099_60min_R1 1 ISTPLTGVR 9 0 Q08999;F5H837;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IS(0.5)T(0.5)PLTGVR 113.46 0.00088606 350980000.0 519180.0 572440.0 447130.0 403960.0 447140.0 554220.0 472820.0 530330.0 651940.0 601210.0 True False 490380.0504403293 544939.1231500421 475952.71523329517 442352.23694499786 482327.37412141485 550760.9074025291 520617.25987851364 528490.409009952 533564.1300699901 595883.7471343025 0.8229458393497777 0.9145057668894965 0.7987341784739485 0.7423465383513789 0.8094320015288252 0.9242757669616328 0.8736893100076029 0.8869018689493453 0.8954164845676407 1.0 19.18467137258728 -6.257554797265536 24.372577263856773 0.9063400936379186 0.8177488544703004 0.47599906250951796 0.051149054499103494 253.48460493787326 1590409.1998271092 0.018092318046660037 0.017446693260382527 5.526436735269496e-07 6.257554797265536 -0.08859123916761813 IS(ph)TPQTNTVPIKPLISTPPVSSQPK ddPTM_KYSE-520_SHP099_60min_R1 1 ISTPQTNTVPIKPLISTPPVSSQPK 25 1 Q9BTA9-2;Q9BTA9;A0A0A0MRT2;Q9BTA9-5 Q9BTA9-2 WAC WW domain-containing adapter protein with coiled-coil 1 IS(0.494)T(0.494)PQT(0.006)NT(0.006)VPIKPLISTPPVSSQPK 88.014 0.0034489000000000004 332710000.0 221060.0 253140.0 192290.0 157180.0 189790.0 244850.0 172520.0 221310.0 261010.0 246710.0 True False 208797.36112781544 240978.7744291134 204685.32107487824 172118.33994210995 204725.39324261626 243321.8003275039 189960.0052329449 220542.32726414237 213617.16352665587 244524.3413374754 0.8538919274283943 0.9855001473924077 0.8370754418775261 0.7038904143476017 0.8372393199091316 0.9950821214632705 0.7768551964762289 0.9019238169003603 0.8736028583421738 1.0 17.89961856079603 IS(ph)VGSDSDLVIWDPDAVK ddPTM_KYSE-520_SHP099_60min_R1 3 ISVGSDSDLVIWDPDAVK 18 0 Q14195-2;Q14195;H0YBT4 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 IS(0.999)VGS(0.001)DSDLVIWDPDAVK;IS(1)VGSDSDLVIWDPDAVK;IS(0.999)VGS(0.001)DSDLVIWDPDAVK 261.98 8.3476e-30 123057000.0 206874.0 195594.0 170530.0 147247.0 167922.0 171253.0 143502.0 187932.0 212163.0 192805.0 True False 195398.28682690507 186197.37064742055 181522.63665764703 161241.31060857512 181136.5060545161 170184.14650392497 158008.58260455655 187280.10775565833 173639.54739399249 191096.89770002023 1.0225089427335292 0.9743610330069782 0.9498983962711803 0.8437672853365116 0.9478777951636884 0.8905646745300719 0.8268505899692574 0.9800269392632768 0.9086466053811512 1.0 17.543944831982294 -4.705866950077651 2.1709323225247745 0.9097300330718214 1.0156610321549127 0.29955834076288845 0.05195202236872077 0.39010431868816436 3.4435143101247836 0.01396857963323751 0.056364633243233354 1.968489261283879e-05 4.705866950077651 0.10593099908309123 IS(ph)VPIK ddPTM_KYSE-520_SHP099_60min_R1 5 ISVPIK 6 0 A0A494C168;A0A3B3ITQ6;Q6P3R8 A0A494C168 NEK5 Serine/threonine-protein kinase Nek5 1 IS(1)VPIK;IS(1)VPIK;IS(1)VPIK;IS(1)VPIK;IS(1)VPIK 80.229 0.0248 1233847000.0 5414790.0 4768660.0 4317940.0 3804360.0 4083620.0 4182900.0 3747390.0 3920670.0 4920240.0 4383300.0 True False 5114420.80458374 4539566.415695414 4596281.321348274 4165925.2305774544 4404977.661380543 4156792.9695320274 4126212.7522019814 3907070.11086126 4026848.445156864 4344467.372155793 1.1772261974765124 1.0449074712334208 1.0579619842023413 0.9589035602562845 1.013928126060416 0.9568015163776823 0.9497626288201331 0.8993208548191974 0.9268911698970081 1.0 22.050747884073555 -1.0000000044886495 0.42624099501872276 0.9370575186295044 5.5286347728887035 0.8073938229758298 0.03357247916363621 31.320675099916127 0.39743346863285933 0.02184159536526953 123.14524099880828 0.09999999896645027 1.0000000044886495 4.5915772542591995 ISAISEKPLS(ph)PHPIR ddPTM_KYSE-520_SHP099_60min_R1 2 ISAISEKPLSPHPIR 15 1 Q2KHM9;I3L341;Q2KHM9-2 Q2KHM9 KIAA0753 Uncharacterized protein KIAA0753 1 ISAIS(0.001)EKPLS(0.999)PHPIR;ISAIS(0.001)EKPLS(0.999)PHPIR 111.63 0.000127 1106680000.0 437380.0 404070.0 389760.0 427110.0 382740.0 474240.0 443410.0 426180.0 602210.0 618940.0 True False 413117.6595045864 384657.8706785646 414884.55323804927 467702.4059846959 412859.46050729166 471280.0922496039 488234.2100645735 424701.6810511601 492863.84447870747 613456.6731280336 0.6734259770915643 0.6270334768993265 0.6763062028855937 0.7624049529037927 0.6730050851058627 0.7682369642285132 0.795873989885957 0.6923091713805862 0.8034207892231088 1.0 19.226601928071297 -13.99999999870463 0.12576228572663986 1.9527284288571065 0.5899904361839278 0.8261503768014449 0.04242644380881282 59.2619791418479 0.4750565131453447 14.203780012113336 0.3639033688387881 1.0000000029826978e-14 13.99999999870463 -1.3627379926731789 ISAPELLLHS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 10 ISAPELLLHSPAR 13 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR;ISAPELLLHS(1)PAR 207.79 2.8225999999999997e-11 5718846000.0 3605962.0 3502397.0 3206678.0 2731563.0 2970385.0 3341098.0 2729690.0 2742649.0 3624744.0 3252089.0 True False 3405932.0995529685 3334136.5909149228 3413385.5947462087 2991169.926245636 3204137.400321242 3320244.968064622 3005633.7044071285 2733135.3907580907 2966581.8619603296 3223278.02154696 1.056667180672906 1.0343931142851768 1.0589795766695949 0.9279900480970836 0.994061752942884 1.030083333137712 0.9324773365235877 0.8479365951331641 0.9203617690218875 1.0 21.62009720172047 -5.698499864719609 0.6057929645156499 0.919619055568349 1.063919659609272 0.41454201246950995 0.05083533880115551 0.9907006612782183 0.7430539367136249 0.037500166315533726 0.07961312307382692 2.0021662452529413e-06 5.698499864719609 0.14430060404092293 ISAS(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 4 ISASLK 6 0 Q9UHD1;E9PPQ5;Q9UHD1-2;Q9BX84-6;Q9BX84-5;Q9BX84-4;Q9BX84-3;Q9BX84-2;Q9BX84 Q9UHD1 CHORDC1;TRPM6 Cysteine and histidine-rich domain-containing protein 1;Transient receptor potential cation channel subfamily M member 6 1 IS(0.001)AS(0.999)LK;ISAS(1)LK;IS(0.003)AS(0.997)LK;IS(0.002)AS(0.998)LK 83.429 0.019597999999999997 2284570000.0 4335470.0 3671800.0 3680640.0 3474680.0 3594310.0 3878550.0 3351640.0 3889250.0 4456900.0 4041040.0 True False 4094972.836554822 3495401.2165158363 3917899.9436322153 3804912.5424993658 3877161.748173604 3854342.53077493 3690456.480054188 3875759.0995077738 3647639.3093059803 4005239.5294815497 1.0224039801896412 0.8727071604050336 0.9781936672684742 0.9499837686341533 0.9680224415131236 0.9623251000106472 0.9214071849859855 0.9676722380719796 0.9107168953209003 1.0 21.933457093521653 ISDDKYGR ddPTM_KYSE-520_SHP099_60min_R1 2 ISDDKYGR 8 1 B0YIW6;P48444-2;P48444 B0YIW6 ARCN1 Coatomer subunit delta 0 ; 119.86 0.001045 1091340000.0 1492840.0 1439010.0 1068800.0 859440.0 1184230.0 1191560.0 855500.0 1107720.0 1191480.0 1134370.0 False True 1410029.1892972398 1369877.7996019553 1137696.5581404641 941120.9191999416 1277422.1636530038 1184123.0320532592 941982.2888754032 1103877.5778637922 975137.2667665601 1124320.3643265066 1.2541169172381568 1.2184052188919865 1.011897137362597 0.8370576119233545 1.1361727530553167 1.0531900600791624 0.8378237366888502 0.9818176499231515 0.867312643003393 1.0 20.100621745604407 -4.783014073375397 3.841404897456947 0.961991289995245 1.2458741621136196 0.5971211406730347 0.08991326253316405 0.14229001243859407 4.496262991590225 0.024378333643229933 0.06253356771849189 1.6481089834505737e-05 4.783014073375397 0.2838828721183746 ISDEDWDIIHR ddPTM_KYSE-520_SHP099_60min_R1 4 ISDEDWDIIHR 11 0 E7ER27;A0A2R8YD50;P51659-3;P51659;P51659-2;A0A2R8YDT8;A0A2R8YF45 E7ER27 HSD17B4 Peroxisomal multifunctional enzyme type 2;(3R)-hydroxyacyl-CoA dehydrogenase;Enoyl-CoA hydratase 2 0 ;;; 219.5 1.3765e-09 2741780000.0 2366160.0 2078880.0 1192620.0 1230990.0 2038090.0 1901770.0 1395620.0 1481620.0 1449720.0 1626930.0 False True 2234904.3879769826 1979007.4843375017 1269498.1934594687 1347982.9194893609 2198476.0878541754 1889900.3480042377 1536702.8895386201 1476480.606032706 1186487.3924672003 1612516.6659323853 1.3859728926799786 1.227278778661928 0.7872775644929056 0.8359497597563952 1.3633819322933807 1.172019110209608 0.9529841904921161 0.9156374239263935 0.7357985300456741 1.0 20.620882640702703 -6.939169104798954 3.8598523906548623 0.8774593979838266 1.114360268663269 0.25178423996670984 0.1933027546457795 0.36992501722232274 11.194660343298134 0.09589426954744903 0.06089846326114573 1.1503523796010225e-07 6.939169104798954 0.23690087067944243 ISDSEGFK ddPTM_KYSE-520_SHP099_60min_R1 1 ISDSEGFK 8 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 107.9 0.010373 281970000.0 484230.0 585670.0 361480.0 350300.0 524630.0 624860.0 426570.0 464920.0 488480.0 496980.0 False True 457368.7966114264 557533.5340914072 384781.5791884498 383592.40667846473 565915.3962636273 620960.0169599523 469691.8585220114 463307.3010331443 399784.34557871724 492577.1438445893 0.9285221661761243 1.1318704918783482 0.7811600355331355 0.7787458502124291 1.1488868359717817 1.2606350593397986 0.9535396930032987 0.9405781547576642 0.8116177345509383 1.0 18.909990161090008 -7.228765905964598 3.77445080246394 0.90409151403014 1.003353797865063 0.0580376109802645 0.15148797005315298 0.728883247639592 22.559729862949048 0.08964119352271745 0.04561482467513508 5.90519296960901e-08 7.228765905964598 0.09926228383492308 ISDSVLVDIKDTEPLIQTAK ddPTM_KYSE-520_SHP099_60min_R1 1 ISDSVLVDIKDTEPLIQTAK 20 1 B7ZAR1;E9PCA1;P48643;E7ENZ3;P48643-2 B7ZAR1 CCT5 T-complex protein 1 subunit epsilon 0 158.58 5.48e-08 0.0 306410.0 208920.0 189990.0 189320.0 188840.0 211160.0 169460.0 194440.0 229960.0 189510.0 False True 289412.8264868085 198883.16960468655 202237.05939474824 207312.9158788666 203700.633647377 209842.0721141749 186590.6705702231 193765.53302263728 188205.06081985295 187831.08883654917 1.5408142937331095 1.0588405297365597 1.0766964119062057 1.10371992817052 1.0844883821369822 1.1171849847326376 0.9933960971316869 1.031594579059552 1.0019910015196112 1.0 17.51907634466119 -4.26139825689564 8.676994824018598 1.056423679776198 1.5434272156751419 0.9232510169809506 0.0422646659702582 0.022241080987801774 28.67475845255978 0.011144970830841315 0.06340432760023078 5.477744142238964e-05 4.26139825689564 0.48700353589894374 ISDYFEFAGGSAPGT(ph)SPGR ddPTM_KYSE-520_SHP099_60min_R1 4 ISDYFEFAGGSAPGTSPGR 19 0 Q86UE8-2;Q86UE8 Q86UE8-2 TLK2 Serine/threonine-protein kinase tousled-like 2 1 ISDYFEFAGGSAPGT(0.5)S(0.5)PGR;ISDYFEFAGGS(0.008)APGT(0.496)S(0.496)PGR;ISDYFEFAGGSAPGT(0.5)S(0.5)PGR;ISDYFEFAGGSAPGT(0.5)S(0.5)PGR 200.9 1.5424e-12 437806000.0 845280.0 959780.0 757900.0 657440.0 720120.0 867600.0 696820.0 813090.0 968310.0 876820.0 True False 798390.633376096 913670.7281408486 806755.4466828766 719922.8999334559 776789.34707768 862184.9865801206 767261.365907842 810269.5805666323 792489.3131086786 869052.0569556383 0.9186913798615527 1.0513417704130557 0.9283165953360815 0.8284002024635966 0.8938352321480462 0.9920982059468639 0.8828715837755707 0.9323602355940266 0.9119008542305677 1.0 19.729083072722002 -4.9743499069887775 24.511025311384074 0.9147031088797389 0.9862198219474355 0.16881844882365415 0.05593125425760677 261.32698049462687 249718.08120344885 0.014241656407796373 0.029644756726609007 1.060840503551533e-05 4.9743499069887775 0.07151671306769658 ISDYFEFAGGSAPGTS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 4 ISDYFEFAGGSAPGTSPGR 19 0 Q86UE8-2;Q86UE8 Q86UE8-2 TLK2 Serine/threonine-protein kinase tousled-like 2 1 ISDYFEFAGGSAPGT(0.009)S(0.991)PGR;ISDYFEFAGGSAPGT(0.064)S(0.936)PGR;ISDYFEFAGGSAPGT(0.007)S(0.993)PGR;ISDYFEFAGGSAPGT(0.313)S(0.687)PGR 384.06 4.026299999999999e-92 2899900000.0 1459010.0 1637550.0 1338190.0 1063730.0 1131700.0 1522570.0 1160780.0 1315740.0 1678260.0 1521460.0 True False 1378075.8068356717 1558879.6399873379 1424451.8685797036 1164826.5793779134 1220758.3515078167 1513067.075861334 1278122.970521089 1311176.0050360234 1373530.2894917643 1507981.0480779693 0.9138548581841455 1.0337528060941101 0.9446086012786901 0.7724411264071049 0.8095316271141214 1.0033727398562782 0.8475723034783155 0.8694910368450663 0.9108405515058878 1.0 20.52418686662058 -5.011679402656451 24.78752754741742 0.8802602126850622 0.9776480649950281 0.18320610678813942 0.07447062916572852 703.3491754426309 1492747.9046859955 0.01971920476820525 0.036867323428288176 9.734655734802724e-06 5.011679402656451 0.09738785230996594 ISDYFEYQGGNGS(ph)SPVR ddPTM_KYSE-520_SHP099_60min_R1 2 ISDYFEYQGGNGSSPVR 17 0 C9JWT6;B3KRP1;Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2 C9JWT6 TLK1 Serine/threonine-protein kinase tousled-like 1 1 ISDYFEYQGGNGS(0.5)S(0.5)PVR;ISDYFEYQGGNGS(0.881)S(0.119)PVR 282.47 2.1026999999999997e-37 1980070000.0 1132120.0 1153370.0 1050690.0 992540.0 972490.0 1207870.0 1024100.0 1007870.0 1396970.0 1131020.0 True False 1069319.046774731 1097960.3739563362 1118419.1585634397 1086870.7031819683 1049019.4302888017 1200331.2352933732 1127626.0222528356 1004373.9342086267 1143315.462747914 1121000.0427202443 0.9538974183978594 0.9794472186566563 0.9976976948631138 0.9695545600021058 0.9357889298052364 1.07076823331837 1.0059107754505634 0.895962440618102 1.0199067075622215 1.0 20.09635490244725 ISDYFEYQGGNGSS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 9 ISDYFEYQGGNGSSPVR 17 0 C9JWT6;B3KRP1;Q9UKI8-4;Q9UKI8-5;Q9UKI8;Q9UKI8-2 C9JWT6 TLK1 Serine/threonine-protein kinase tousled-like 1 1 ISDYFEYQGGNGS(0.19)S(0.81)PVR;ISDYFEYQGGNGS(0.214)S(0.786)PVR;ISDYFEYQGGNGS(0.054)S(0.946)PVR;ISDYFEYQGGNGS(0.006)S(0.994)PVR;ISDYFEYQGGNGS(0.205)S(0.795)PVR;ISDYFEYQGGNGSS(1)PVR;ISDYFEYQGGNGS(0.048)S(0.952)PVR;ISDYFEYQGGNGS(0.001)S(0.999)PVR;ISDYFEYQGGNGS(0.05)S(0.95)PVR 450.18 8.966999999999998e-119 11532260000.0 5520430.0 5624750.0 4893040.0 4316110.0 4145110.0 5018230.0 4454630.0 4669330.0 5900480.0 4858690.0 True False 5214200.743195633 5354528.567078124 5208453.187540811 4726311.796714208 4471306.574550302 4986909.365152095 4904947.473399226 4653133.1840598155 4829101.570996374 4815645.78660362 1.0827625149882767 1.111902495398144 1.081568997875616 0.9814492190978985 0.9284957350868254 1.0355639899896507 1.0185440729557038 0.9662532067877813 1.0027941806746221 1.0 22.19929784831881 -5.212613945407722 5.0198885391126895 0.989421381070189 1.0961363863060358 0.728618278636681 0.028464447126832285 0.10857488179233266 6.323938506912506 0.00818369404215808 0.01425491399098075 6.128949664151506e-06 5.212613945407722 0.10671500523584687 ISEDET(ph)ERNGDDGTHDK ddPTM_KYSE-520_SHP099_60min_R1 2 ISEDETERNGDDGTHDK 17 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 IS(0.415)EDET(0.585)ERNGDDGTHDK;IS(0.488)EDET(0.512)ERNGDDGTHDK 178.19 2.8519000000000002e-08 1281920000.0 883190.0 861370.0 774450.0 682080.0 733820.0 694830.0 671390.0 602030.0 949010.0 703100.0 True False 834197.6901043847 819988.4922572699 824372.2861638116 746904.6781251708 791567.4591353432 690493.3082358988 739260.6533349593 599941.698444859 776693.7065952714 696871.0810035222 1.1970617131982386 1.1766717182128634 1.1829623995541365 1.071797493805595 1.135887943571219 0.9908479876099334 1.0608284279359024 0.8609077271235291 1.1145443221388975 1.0 19.410532261090488 -5.815989594594338 0.8533597554765118 0.9905216581537921 1.196892519025841 0.5577148364816471 0.06675146874607149 0.43479638665282905 0.6906914536341089 0.03351779416230227 0.05196586164577898 1.5276026581388106e-06 5.815989594594338 0.20637086087204892 ISEGLPT(ph)PT(ph)KMTPR ddPTM_KYSE-520_SHP099_60min_R1 2 ISEGLPTPTKMTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 ISEGLPT(0.993)PT(0.621)KMT(0.386)PR;IS(0.001)EGLPT(0.993)PT(0.689)KMT(0.317)PR 59.898 0.017763 2817900000.0 3178100.0 3095500.0 3536900.0 2870900.0 3143800.0 2657700.0 2825000.0 3050300.0 4008100.0 3392700.0 True False 3001804.4576147194 2946787.533559776 3764894.233240085 3143749.4728324437 3391199.1742248624 2641112.308476243 3110578.5693430924 3039719.2212453745 3280330.0759786568 3362643.3174806554 0.8926919016387732 0.8763306884916818 1.1196234265074545 0.9349042333719145 1.0084920861501308 0.7854274328610641 0.9250397011103711 0.9039671871956908 0.9755212689154111 1.0 21.681164326662543 ISEGLPT(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 6 ISEGLPTPTK 10 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 ISEGLPT(1)PTK;ISEGLPT(1)PTK;ISEGLPT(0.999)PT(0.001)K;ISEGLPT(1)PTK;ISEGLPT(0.996)PT(0.004)K;ISEGLPT(0.997)PT(0.003)K 164.21 0.00030504 25955770000.0 21033200.0 27568400.0 17647000.0 16580600.0 18894100.0 29183800.0 19266900.0 24040600.0 26114900.0 25773800.0 True False 19866446.467355285 26243972.68298798 18784553.856198337 18156415.238860816 20380958.177276533 29001653.079019025 21214586.278823487 23957208.769718222 21373092.463056114 25545464.183712993 0.7776897818134588 1.027343738765191 0.735338129740261 0.7107490828229612 0.7978308020047962 1.1352955996591203 0.8304639182226823 0.9378263239778045 0.8366687843035142 1.0 24.606563815234193 ISEGLPT(ph)PTKMT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 18 ISEGLPTPTKMTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 IS(0.001)EGLPT(0.998)PT(0.004)KMT(0.997)PR;ISEGLPT(0.999)PT(0.013)KMT(0.988)PR;ISEGLPT(0.77)PT(0.27)KMT(0.959)PR;IS(0.002)EGLPT(0.997)PTKMT(1)PR;ISEGLPT(1)PTKMT(1)PR;ISEGLPT(0.998)PT(0.002)KMT(1)PR;IS(0.005)EGLPT(0.992)PT(0.003)KMT(1)PR;ISEGLPT(0.999)PT(0.001)KMT(1)PR;ISEGLPT(0.997)PT(0.003)KMT(1)PR;ISEGLPT(1)PTKMT(1)PR;ISEGLPT(0.999)PT(0.002)KMT(0.999)PR;IS(0.012)EGLPT(0.977)PT(0.246)KMT(0.765)PR;ISEGLPT(0.774)PT(0.46)KMT(0.766)PR;ISEGLPT(0.998)PT(0.054)KMT(0.948)PR;ISEGLPT(0.972)PT(0.301)KMT(0.726)PR;IS(0.003)EGLPT(0.996)PT(0.078)KMT(0.923)PR;ISEGLPT(0.974)PT(0.063)KMT(0.963)PR;ISEGLPT(0.536)PT(0.536)KMT(0.928)PR 200.99 3.004e-11 98037910000.0 32780620.0 32097740.0 30408890.0 32619650.0 32305970.0 30576580.0 30024880.0 32018980.0 35827280.0 32547070.0 True False 30962213.662054114 30555716.390710052 32369095.70534429 35719811.72854461 34848266.04317491 30385740.222413536 33060087.88499042 31907913.631666135 29321949.084231637 32258728.28103732 0.9598088738127555 0.9472077176914518 1.0034213197540043 1.1072913791688999 1.0802740188508857 0.9419385648961003 1.024841636563341 0.9891249696418627 0.9089617181675443 1.0 24.943186229214557 -9.302815957542979 10.57225167334198 0.9999999432365089 0.9994914765355024 0.0 0.05893085107402802 0.0 0.0 0.06119900135699015 0.014842938045717 4.979480574238099e-10 9.302815957542979 -0.0005084667010064603 ISEGLPTPTKMT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 ISEGLPTPTKMTPR 14 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 ISEGLPTPT(0.001)KMT(0.999)PR;ISEGLPTPTKMT(1)PR;ISEGLPTPTKMT(1)PR;ISEGLPTPTKMT(1)PR 193.19 2.1303e-10 5965670000.0 7797080.0 9024180.0 6627530.0 5108530.0 5613850.0 8685020.0 5747520.0 6798150.0 9678630.0 6949130.0 True False 7364560.429306368 8590644.847229658 7054751.18822293 5594043.155264455 6055628.056562838 8630813.568635406 6328535.411989659 6774568.804350131 7921234.770407261 6887566.114541328 1.0692544081367132 1.2472685857915349 1.0242734619024032 0.8121944765733818 0.8792116047754422 1.2531006490687122 0.9188347968999646 0.9835940144439947 1.1500774930760531 1.0 22.71556283167049 -4.899898048186627 7.313682061612485 0.9949211373079346 1.1565040992255577 0.19678322630369338 0.1262424076390269 0.34230180235146873 21.820249681780396 0.03389281267314631 0.07133403698743893 1.2592209826576835e-05 4.899898048186627 0.1615829619176231 ISELDSMMSESDNS(ph)KSPCNNGFK ddPTM_KYSE-520_SHP099_60min_R1 3 ISELDSMMSESDNSKSPCNNGFK 23 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 ISELDSMMSESDNS(0.743)KS(0.257)PCNNGFK;ISELDSMMSESDNS(0.5)KS(0.5)PCNNGFK;ISELDSMMSESDNS(0.793)KS(0.207)PCNNGFK 300.5 6.506499999999999e-49 8421700000.0 2192910.0 2100090.0 1753140.0 1756500.0 1636360.0 1932270.0 1717140.0 1883550.0 2478300.0 2013330.0 True False 2071264.9108422908 1999198.5241006445 1866150.2095231772 1923437.2318890188 1765132.2223852028 1920209.986190837 1890725.26887143 1877016.4046738734 2028303.192858939 1995493.46254704 1.0379712836535864 1.001856714453414 0.9351823218409497 0.9638905203096737 0.8845592609119325 0.9622732533234605 0.9474976011487984 0.9406276892924805 1.0164419132047773 1.0 20.92831412175571 -4.569847886365913 3.7387629790844183 0.9519003598199678 1.0326369776732673 0.367820093647935 0.034346826768691795 0.20467606528883905 5.7863097528056135 0.008712342195720283 0.029938738510485962 2.6924776914518486e-05 4.569847886365913 0.08073661785329955 ISELDSMMSESDNSKS(ph)PCNNGFK ddPTM_KYSE-520_SHP099_60min_R1 3 ISELDSMMSESDNSKSPCNNGFK 23 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 ISELDSMMSESDNS(0.204)KS(0.796)PCNNGFK;ISELDSMMSESDNS(0.023)KS(0.977)PCNNGFK;ISELDSMMSESDNS(0.204)KS(0.796)PCNNGFK 260.46 1.6280999999999998e-37 2009470000.0 1498480.0 1480600.0 1170220.0 1133370.0 1258930.0 1412950.0 1267010.0 1345760.0 1739210.0 1302280.0 True False 1415356.3272541796 1409469.7535740908 1245654.2536182029 1241085.1440398835 1358000.6286681427 1404131.2549428095 1395091.735625979 1341091.8726627454 1423413.3059162304 1290742.8123585102 1.0965440316246808 1.091983422319925 0.9650677436987471 0.9615278366509826 1.0521078371815495 1.0878474328879741 1.0808440862644024 1.0390078176861857 1.1027861571549626 1.0 20.299770133641843 -5.9892621415790845 24.98663604204115 1.0661813227283832 1.0260034986458468 0.0888341815932795 0.049337908410652435 500.0340752170703 1163554.2806422648 0.016363575120299085 0.0185409885193847 1.0250330261758678e-06 5.9892621415790845 -0.04017782408253634 ISELGS(ph)QLSDEAVEDGLFHEFKR ddPTM_KYSE-520_SHP099_60min_R1 2 ISELGSQLSDEAVEDGLFHEFKR 23 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 IS(0.008)ELGS(0.992)QLSDEAVEDGLFHEFKR;IS(0.007)ELGS(0.992)QLS(0.001)DEAVEDGLFHEFKR 121.72 8.143e-05 64538000.0 71840.0 79317.0 64750.0 65948.0 69955.0 64438.0 55734.0 61027.0 91829.0 65052.0 True False 67854.89199051051 75506.49226275574 68923.88860366297 72215.67809201081 75460.06051049691 64035.81853993758 61368.13663142227 60815.311580808884 75155.16842070912 64475.68988969015 1.052410483805629 1.1710846738040015 1.068990323664363 1.1200450621864275 1.17036453025318 0.9931777178265927 0.9518027141146607 0.9432285514874875 1.1656357388232716 1.0 15.976467684479175 -6.275378719521169 24.720627208735763 1.003535330719085 1.117155848912969 0.3814018104175364 0.06705908255864636 703.0188073067902 1246760.042040218 0.023192183671131232 0.020564453171953382 5.304216967810263e-07 6.275378719521169 0.11362051819388386 ISELGSQLS(ph)DEAVEDGLFHEFK ddPTM_KYSE-520_SHP099_60min_R1 2 ISELGSQLSDEAVEDGLFHEFK 22 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 ISELGS(0.047)QLS(0.953)DEAVEDGLFHEFK;ISELGS(0.003)QLS(0.997)DEAVEDGLFHEFK 171.93 6.984999999999999e-10 84502000.0 109463.0 100539.0 81458.0 104271.0 94929.0 96390.0 94926.0 107045.0 117796.0 103278.0 True False 103390.86918091943 95708.95552788426 86708.91301740814 114180.88448978058 102399.37222787466 95788.39425594495 104522.04646848228 106673.68587949093 96407.21579550978 102363.0372690682 1.0100410454718094 0.9349952686173894 0.8470724915038215 1.1154503377000076 1.0003549617105534 0.9357713175719733 1.0210916875565053 1.0421113785349285 0.9418166788280897 1.0 16.643335334547107 -5.249889609502696 24.99766522291123 1.007046604508318 0.9311321822242806 0.25920372977232187 0.0599293650855292 1088.5828782157741 2356062.5489808014 0.016419930632247445 0.028133355849695375 5.624842812519399e-06 5.249889609502696 -0.07591442228403733 ISEQFTAMFR ddPTM_KYSE-520_SHP099_60min_R1 2 ISEQFTAMFR 10 0 P04350;A0A0B4J269;Q13509;Q13509-2;Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371 P04350;A0A0B4J269;Q5JP53;P68371 TUBB4A;TUBB3;TUBB;TUBB2B;TUBB2A;TUBB4B Tubulin beta-4A chain;Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain 0 ; 192.64 2.1127e-05 683630000.0 222933.0 268090.0 184761.0 179906.0 259310.0 198445.0 220420.0 177278.0 230200.0 175991.0 False True 210566.46208408216 255210.55398870626 196670.98968805204 197004.21214928877 279716.2217279244 197206.4311455647 242702.2046918954 176663.06399499634 188401.4828697607 174431.85665892612 1.2071559984356042 1.4630960128328514 1.1274946758871633 1.129405006188172 1.6035845004784028 1.1305643070185893 1.391386925190283 1.012791283535054 1.0800864387870959 1.0 17.412304019407085 -7.272180363359578 24.749883288721612 1.0348291121831075 1.2927771838905833 0.3891052203955824 0.15057666762292582 681.4186292652802 1570146.987970042 0.07886756704189533 0.0384999031047903 5.34342399851737e-08 7.272180363359578 0.2579480717074758 ISESVLRDS(ph)PPPHEDYEDEVFVR ddPTM_KYSE-520_SHP099_60min_R1 7 ISESVLRDSPPPHEDYEDEVFVR 23 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 IS(0.008)ES(0.029)VLRDS(0.963)PPPHEDYEDEVFVR;ISESVLRDS(1)PPPHEDYEDEVFVR;IS(0.112)ES(0.101)VLRDS(0.787)PPPHEDYEDEVFVR;IS(0.002)ES(0.014)VLRDS(0.984)PPPHEDYEDEVFVR;IS(0.035)ES(0.126)VLRDS(0.838)PPPHEDYEDEVFVR;IS(0.001)ES(0.007)VLRDS(0.992)PPPHEDYEDEVFVR;IS(0.006)ES(0.007)VLRDS(0.986)PPPHEDYEDEVFVR 203.19 7.896899999999999e-16 6248950000.0 3279590.0 3080730.0 2723660.0 2799390.0 2896590.0 2759600.0 2611780.0 2717740.0 3181890.0 2767400.0 True False 3097664.604999416 2932727.106529997 2899231.4816100844 3065443.1839327053 3124535.15365736 2742376.3127783546 2875804.2109164232 2708312.7942652875 2604138.9849194745 2742882.989004617 1.1293462453254515 1.0692133489785773 1.057001517466192 1.1175989629237317 1.139142707210869 0.9998152760331762 1.0484604055093298 0.9873964019325976 0.9494167251605974 1.0 21.387261647659308 -6.698514256601429 1.3813949629707205 0.9797083130785963 1.0972507883812317 0.6731494995681246 0.03537505278872167 0.26723324774374707 1.0372284268178547 0.02141742918649171 0.013274073487086594 2.002099897501012e-07 6.698514256601429 0.1175424753026354 ISESVLRDS(ph)PPPHEDYEDEVFVRDPHPK ddPTM_KYSE-520_SHP099_60min_R1 7 ISESVLRDSPPPHEDYEDEVFVRDPHPK 28 2 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 IS(0.029)ES(0.021)VLRDS(0.95)PPPHEDYEDEVFVRDPHPK;IS(0.135)ES(0.119)VLRDS(0.746)PPPHEDYEDEVFVRDPHPK;IS(0.242)ES(0.208)VLRDS(0.55)PPPHEDYEDEVFVRDPHPK;IS(0.116)ES(0.107)VLRDS(0.777)PPPHEDYEDEVFVRDPHPK;IS(0.002)ES(0.017)VLRDS(0.981)PPPHEDYEDEVFVRDPHPK;ISES(0.007)VLRDS(0.993)PPPHEDYEDEVFVRDPHPK;IS(0.046)ES(0.262)VLRDS(0.692)PPPHEDYEDEVFVRDPHPK 212.43 1.8929e-22 13588120000.0 4413260.0 4415350.0 4158320.0 4093380.0 3768870.0 2978920.0 2831630.0 2844840.0 4153950.0 2480160.0 True False 4168447.670184299 4203229.958424531 4426371.960747248 4482413.604480429 4065458.627063067 2960327.4553057337 3117878.794445655 2834971.9140306474 3399697.392557956 2458187.711935282 1.695740178809438 1.709889744390355 1.8006647495859676 1.82346270088199 1.653843848996549 1.204272334831227 1.2683648117299435 1.1532772295077216 1.3830096766212543 1.0 21.229163656205642 -6.197714552763256 3.714812584552629 1.2122750428024782 1.7553700668004035 0.883439343542568 0.09756332999395577 0.07435157910895471 2.04936914367357 0.0324678055855177 0.03178160139144779 6.342864695622093e-07 6.197714552763256 0.5430950239979253 ISEYKPLNMAGVEQPPS(ph)PELR ddPTM_KYSE-520_SHP099_60min_R1 2 ISEYKPLNMAGVEQPPSPELR 21 1 A0A590UK80;A0A3B3IUA3;A0A3B3ITG5;A0A3B3IT75;B0QYN4;A0A3B3ISV7;A0A0A0MRR4;A0A3B3ISS0;A0A3F2YNZ1;Q9Y468-2;Q9Y468-4;Q9Y468-1;Q9Y468 A0A590UK80 L3MBTL1 Lethal(3)malignant brain tumor-like protein 1 1 ISEYKPLNMAGVEQPPS(1)PELR;ISEYKPLNMAGVEQPPS(1)PELR 177.06 1.0081e-09 318550000.0 1179920.0 1032680.0 841650.0 883220.0 902550.0 1083200.0 984880.0 1103930.0 1179290.0 1072790.0 True False 1114467.4854877957 983068.5027157179 895904.1056876138 967160.9632502247 973575.5501929675 1076439.3470073617 1084441.2819025214 1100100.7244891997 965160.6634816683 1063285.9152179905 1.048135284721901 0.9245570628236651 0.8425806200056165 0.909596327204185 0.9156291231351156 1.0123705501983205 1.0198962164190746 1.0346236216847295 0.9077150836553638 1.0 20.020098155848434 -6.258110093562426 24.72144647683309 0.9986460172613086 0.9221238450333726 0.250739881229489 0.05711010330982863 342.05354747920245 2539907.9912568224 0.019877171670876048 0.01908872028962207 5.519375055000442e-07 6.258110093562426 -0.076522172227936 ISGLIYEETR ddPTM_KYSE-520_SHP099_60min_R1 7 ISGLIYEETR 10 0 P62805 P62805 HIST1H4A Histone H4 0 ;;;;;; 218.55 2.6485e-08 5861826000.0 2267337.0 4119075.0 1599136.0 2462934.0 3189232.0 3831651.0 3518880.0 2262318.0 3136588.0 2750574.0 False True 2141563.2967857495 3921188.454142372 1702218.865268067 2697010.5068518906 3440206.4141521403 3807736.2448302326 3874602.7313592946 2254470.54688699 2567062.6861489867 2726206.0542741925 0.7855471135162986 1.4383316506816004 0.6243911250212724 0.9892907774243518 1.2619025655667244 1.396716230917468 1.4212435356031237 0.8269626367208716 0.9416246002844509 1.0 21.37846317851237 -4.002479215689101 22.840918033891565 1.1013463602622169 0.5083925314303591 0.11573835122173848 0.2607731289649757 12245.208840680452 56441.06443858337 0.06568978697382981 178415.59826346376 9.943076580366822e-05 4.002479215689101 -0.5929538288318578 ISGLIYEETRGVLK ddPTM_KYSE-520_SHP099_60min_R1 5 ISGLIYEETRGVLK 14 1 P62805 P62805 HIST1H4A Histone H4 0 ;;;; 234.22 2.9967e-18 3617732000.0 1755275.0 1528944.0 1020443.0 1524292.0 1326967.0 1656832.0 2086299.0 1810170.0 2563831.0 1457140.0 False True 1657906.3966960358 1455491.2352482663 1086222.3885465295 1669160.2533848998 1431391.7534905681 1646491.0969173769 2297202.4632360768 1803890.9427668548 2098303.9193199864 1444230.873237765 1.1479510841498908 1.007796788047646 0.7521113200629549 1.1557433678473266 0.9911100641974138 1.1400470156313531 1.5906061183182354 1.249032253910195 1.4528867636071792 1.0 20.461869957706387 -6.531180402377692 24.51051561988543 1.3469472892773238 1.0105473003773018 0.4106535711736401 0.17541060346494894 135.74263591178297 400772.536227509 0.06403313340997496 0.04969043595521218 2.943198799116268e-07 6.531180402377692 -0.336399988900022 ISHEGS(ph)PVKPVAIR ddPTM_KYSE-520_SHP099_60min_R1 3 ISHEGSPVKPVAIR 14 1 Q96II8-3;Q96II8;Q96II8-2 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 ISHEGS(1)PVKPVAIR;ISHEGS(1)PVKPVAIR;ISHEGS(1)PVKPVAIR 200.33 2.5309e-11 3681250000.0 4855280.0 3794000.0 3777750.0 3722280.0 4173070.0 3973900.0 3283190.0 3032400.0 3988300.0 3791930.0 True False 4585947.939639282 3611730.545089899 4021269.809613712 4076044.372055711 4501466.867479663 3949097.4160566456 3615086.886046563 3021881.3121674834 3264125.256861275 3758336.4502768954 1.2202068655405804 0.9609918092415076 1.0699600375898877 1.0845341884586752 1.1977285501270163 1.0507567558954696 0.9618848482232668 0.8040475758749184 0.8685026740010972 1.0 21.841662793458084 -6.846289889502861 2.8476585641869696 0.8780256364891946 1.0965265782498401 0.5713693352288705 0.08179504700660502 0.18521409144273357 3.0303940206126376 0.037833016292344444 0.024269065381689443 1.4246563248270967e-07 6.846289889502861 0.2185009417606455 ISHSLYSGIEGLDES(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 ISHSLYSGIEGLDESPSR 18 0 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10;F5GZI3;B1AP52 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 ISHSLYSGIEGLDES(0.999)PS(0.001)R 171.08 1.0551e-08 242420000.0 155450.0 247820.0 230640.0 303390.0 205770.0 202460.0 208020.0 187780.0 335860.0 164990.0 True False 146826.87861810782 235914.35521459626 245507.42343704778 332224.09438247053 221962.92832885368 201196.37204127645 229048.69167955758 187128.63500818136 274876.29034160665 163528.31696027756 0.8978682184674678 1.4426513988516245 1.5013144389951965 2.031599789919997 1.3573363467244048 1.2303457638480362 1.4006668443557424 1.1443194578565652 1.6809094317797968 1.0 17.319180952367397 -5.982726175734131 24.995101888138 1.3056327598496293 1.4970751147165573 0.06629750061304118 0.3037615842096857 684.3438831468673 990235.8057107882 0.09572987298112931 0.10852579272009766 1.0405760460586382e-06 5.982726175734131 0.19144235486692796 ISICS(ph)SDKR ddPTM_KYSE-520_SHP099_60min_R1 3 ISICSSDKR 9 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 IS(0.004)ICS(0.714)S(0.281)DKR;ISICS(0.931)S(0.069)DKR;IS(0.13)ICS(0.854)S(0.016)DKR 135.16 0.00047816 6439890000.0 8342900.0 7492200.0 6375700.0 6365270.0 6801860.0 6638960.0 6876570.0 6848480.0 8164700.0 6883100.0 True False 7880102.705841177 7132263.465978519 6786687.823480683 6970223.347011795 7337127.684710583 6597523.788042829 7571720.804455803 6824724.221327256 6682196.295337682 6822121.088970765 1.155081037564818 1.0454612829299026 0.9948061218750037 1.0217091218566123 1.0754906852316684 0.9670780834876943 1.1098778086329935 1.0003815722885219 0.9794895470472816 1.0 22.701788931561808 -4.283456905374015 3.467963557917182 1.0220361713131485 1.1684588404887337 0.49095154917285666 0.04140958053499218 0.22792225755220216 4.806911634370045 0.010148880234425088 0.08498050616085538 5.206466695093397e-05 4.283456905374015 0.14642266917558522 ISICSS(ph)DKR ddPTM_KYSE-520_SHP099_60min_R1 3 ISICSSDKR 9 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 ISICS(0.206)S(0.794)DKR;ISICS(0.208)S(0.792)DKR;ISICS(0.149)S(0.851)DKR 174.77 6.0432e-05 5027600000.0 10220800.0 9074400.0 8628000.0 8845700.0 9257100.0 9266300.0 8428400.0 8980900.0 10839200.0 8801100.0 True False 9653831.849340338 8638452.203047914 9184174.685288107 9686392.668443307 9985581.104305932 9208465.584540544 9280424.92525711 8949747.354057824 8871074.513996135 8723129.101152191 1.1066936803749947 0.9902928298868016 1.0528532340619627 1.1104263798140834 1.1447246725933462 1.055637888395375 1.0638871461883224 1.0259790093987833 1.0169601310640242 1.0 23.05641431085637 -7.331968507716982 1.646873540978883 1.0060949448382104 1.0762385980571778 0.3498693255966837 0.03896192124232928 0.5240865665416422 2.546106782737517 0.034709650113858986 0.012802300398984053 4.6561985609941645e-08 7.331968507716982 0.07014365321896743 ISIFDNLDVVS(ph)EDEEAPEEAPENGSNK ddPTM_KYSE-520_SHP099_60min_R1 1 ISIFDNLDVVSEDEEAPEEAPENGSNK 27 0 A0A5F9ZHX4;A0A5F9ZHW9;A0A5F9ZH11;P55201-4;P55201-3;P55201;P55201-2 A0A5F9ZHX4 BRPF1 Peregrin 1 IS(0.023)IFDNLDVVS(0.977)EDEEAPEEAPENGSNK 55.702 0.040743 30678000.0 39705.0 48639.0 27841.0 32790.0 34409.0 42229.0 37695.0 47548.0 45096.0 43448.0 True False 37502.48450004481 46302.309431372574 29635.675407175004 35906.351741327024 37116.792539571 41965.433146947835 41505.57846774792 47383.06708578665 36907.7031776487 43063.08452203251 0.8708731600695553 1.0752204572731607 0.6881921194477465 0.8338081709626753 0.8619167194254468 0.9745106188451715 0.9638319904026447 1.1003175367417977 0.8570612994237671 1.0 15.394164040096465 -6.290065167132282 5.00320416437929 0.9856103397143949 0.8656279216426462 0.22961103910839797 0.10338704866483256 0.30570864446949353 21.128894615422976 0.03703388145635842 0.033546998352995815 5.127844334436161e-07 6.290065167132282 -0.1199824180717487 ISINQT(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 8 ISINQTPGK 9 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDG6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 ISINQT(1)PGK;IS(0.001)INQT(0.999)PGK;ISINQT(1)PGK;ISINQT(1)PGK;ISINQT(1)PGK;ISINQT(1)PGK;ISINQT(1)PGK;ISINQT(1)PGK 200.67 9.4221e-06 62781800000.0 34390400.0 48928300.0 34790100.0 26015600.0 31553200.0 39464000.0 31729400.0 38826600.0 49852700.0 37841000.0 True False 32482695.956437267 46577711.02512438 37032725.51212812 28488114.80212468 34036257.326850265 39217690.53757251 34936917.40110252 38691919.5867966 40800706.36429758 37505758.179852486 0.8660722388458866 1.2418816012669012 0.9873877321595256 0.7595664288537981 0.907494181656992 1.0456445207562728 0.931508096265338 1.031626114615683 1.0878517951468873 1.0 25.160608770747633 -9.650991633204864 9.390387271165105 1.0000003104041681 0.9847706589698075 0.0014002665473482612 0.12500179273234407 0.0 0.0 0.12503736775948715 0.030326016142445053 2.23361525358962e-10 9.650991633204864 -0.015229651434360614 ISKLEVTEIVKPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 ISKLEVTEIVKPSPK 15 2 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 ISKLEVTEIVKPS(1)PK;ISKLEVTEIVKPS(1)PK 137.09 8.5491e-06 767000000.0 1348880.0 1718930.0 1813660.0 942600.0 1109000.0 1166120.0 681160.0 763870.0 2176510.0 1026200.0 True False 1274054.937474386 1636350.0226334685 1930571.4255586006 1032184.4205969772 1196271.9906531512 1158841.812529749 750018.300280969 761220.3132585974 1781310.64935214 1017108.6663715185 1.2526242078140086 1.6088251695574092 1.8980975085443055 1.0148221667201407 1.1761496388785952 1.1393490694203363 0.737402329838187 0.7484159150606893 1.75134743046372 1.0 19.956042392138404 -5.280757438370213 24.52375646229117 1.0626573184094852 1.5887465885183267 0.3691163002807437 0.3021404155042685 635.4652908070553 806704.5987911003 0.08553922952572802 0.12710835375759186 5.238929589515582e-06 5.280757438370213 0.5260892701088415 ISKPGAVS(ph)TPVK ddPTM_KYSE-520_SHP099_60min_R1 1 ISKPGAVSTPVK 12 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ISKPGAVS(0.5)T(0.5)PVK 93.90899999999999 0.0031619 2393600000.0 3050000.0 2925000.0 2097400.0 1818800.0 1820500.0 2562900.0 1823900.0 2262000.0 2477800.0 2342100.0 True False 2880810.4199757357 2784478.6094854884 2232601.7599586514 1991658.2051578397 1963762.9927719214 2546903.990440516 2008277.6115486228 2254153.6499547674 2027893.9802549654 2321350.816126228 1.2410060555961595 1.199507885728409 0.9617683567899155 0.8579738104736081 0.8459570087941151 1.0971646218862694 0.8651331791805392 0.971052558835723 0.8735835902817262 1.0 21.14653313700428 -4.761373752548152 4.025287813448568 0.9281768648134374 1.2315672974312204 0.7092923582254982 0.07371985155529541 0.10177012918597504 3.6789411118790385 0.01910692709859507 0.049978530074443216 1.7323125330227235e-05 4.761373752548152 0.303390432617783 ISKPGAVS(ph)TPVKHADDHTPK ddPTM_KYSE-520_SHP099_60min_R1 1 ISKPGAVSTPVKHADDHTPK 20 2 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 IS(0.014)KPGAVS(0.493)T(0.493)PVKHADDHTPK 131.43 8.6584e-06 1682200000.0 2843400.0 2928700.0 3276800.0 2396300.0 2323500.0 2244000.0 1719200.0 1846700.0 3292000.0 1735200.0 True False 2685670.9338226267 2788000.855931676 3488027.771065371 2624043.6315261326 2506346.2310934095 2229994.3636304624 1892993.5137750935 1840294.2287230198 2694255.784566687 1719827.477965172 1.5615932227110363 1.6210933315417906 2.0281265509214097 1.5257598015766043 1.4573242160654474 1.2966384083297116 1.1006880271588662 1.070045834423101 1.5665849156884142 1.0 20.713832419619262 -5.960140238234199 1.6679047919686316 1.1963305589843667 1.7215069417201092 0.5964234603051244 0.18848983093585267 0.2570439309469596 1.4598295658458453 0.07261082102986594 0.08290922305338014 1.0961241890156078e-06 5.960140238234199 0.5251763827357425 ISKPGAVST(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 ISKPGAVSTPVK 12 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 ISKPGAVS(0.085)T(0.915)PVK;ISKPGAVS(0.086)T(0.914)PVK 151.8 4.3126999999999996e-05 18082000000.0 10646700.0 9831400.0 7177100.0 5984300.0 6211900.0 8373600.0 6014100.0 7392900.0 7976300.0 7719700.0 True False 10056106.327329727 9359084.786767755 7639747.349766028 6553046.072754603 6700741.189123804 8321337.256370792 6622063.919959753 7367255.755415833 6528004.986160176 7651309.463835724 1.3142987321138153 1.2232003987035045 0.9984888712024595 0.8564607278960399 0.8757639748849755 1.0875703427892947 0.8654811246701302 0.9628751510101003 0.8531879434513923 1.0 22.867275244621663 -4.74735067814439 2.793946298882412 0.9283531984055482 1.3000985609235107 0.7855767667602501 0.07071301527843499 0.11111454184775114 1.7199113843380553 0.018791210439769123 0.05870912880608909 1.7891605837914045e-05 4.74735067814439 0.37174536251796253 ISKPPS(ph)PKPMPVIR ddPTM_KYSE-520_SHP099_60min_R1 2 ISKPPSPKPMPVIR 14 2 A6PVU8;Q9NNX1-3;Q9NNX1-2;Q9NNX1 A6PVU8 TUFT1 Tuftelin 1 IS(0.005)KPPS(0.995)PKPMPVIR;IS(0.002)KPPS(0.998)PKPMPVIR 86.479 0.0022798000000000002 1326700000.0 1436930.0 1451480.0 962060.0 702280.0 1026620.0 1201560.0 918160.0 1075030.0 1690980.0 1245610.0 True False 1357220.6284510628 1381748.7220841022 1024075.9269504242 769024.4800518192 1107409.1533312318 1194060.6183439475 1010976.5731780704 1071300.9718438892 1383940.65813687 1234574.8644699159 1.0993425085110629 1.1192101522959303 0.8294968222847525 0.6229063155129211 0.8969963549409499 0.967183645729444 0.8188864055742371 0.8677488928983412 1.1209856104846965 1.0 20.23558289330966 -9.958234451770018 16.91026351310048 0.9999999926651567 0.9161970210113798 0.016411902035906256 0.15000540267171963 0.0 0.0 0.15547164219098922 0.03770741191421669 1.1009448093703427e-10 9.958234451770018 -0.08380297165377693 ISLAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 ISLASPR 7 0 E9PEM5;A0A494C1L5;P50851-2;P50851;H0YAC6;A0A494BZW2;A0A3B3IU76;A0A3B3IS13 E9PEM5 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 IS(0.001)LAS(0.999)PR 68.016 0.060916 0.0 277610.0 235180.0 212960.0 212190.0 263920.0 246840.0 240310.0 257970.0 304490.0 242000.0 True False 262210.4198981853 223881.59978762333 226687.74234804758 232356.47380274997 284689.0025006126 245299.37999935093 264602.8799995884 257075.16228065058 249202.29156825962 239856.06827315103 1.0931990246733172 0.9333997734535706 0.9450990503600384 0.9687329383642675 1.1869159890355796 1.0226940755153253 1.1031735903310789 1.0717892781761529 1.0389659655575818 1.0 17.871809414108945 ISLEQPPNGS(ph)DTPNPEK ddPTM_KYSE-520_SHP099_60min_R1 1 ISLEQPPNGSDTPNPEK 17 0 E9PJ60;Q9UHI6 E9PJ60 DDX20 Probable ATP-dependent RNA helicase DDX20 1 ISLEQPPNGS(0.999)DT(0.001)PNPEK 178.78 3.2232e-07 0.0 709730.0 657480.0 533400.0 577430.0 593780.0 593700.0 523710.0 638300.0 763970.0 572530.0 True False 670359.8620883222 625893.6739024 567783.8174701752 632308.7735893398 640507.1078539473 589994.4980781669 576651.7177170515 636085.8862803393 625252.3061164689 567457.8296216006 1.1813386424421002 1.10297830293357 1.0005744706153619 1.114283283413296 1.1287307609819366 1.0397151423068645 1.0162018878153143 1.12093948321147 1.10184805544653 1.0 19.114153657578083 -6.268293748113445 24.613196392947437 1.060828443406779 1.1000862466002246 0.16991568627277698 0.05382222686710852 1096.4056725679122 3937049.429398225 0.019745490477312576 0.017792290686734883 5.39145831688165e-07 6.268293748113445 0.03925780319344563 ISLEQPPNGS(ph)DTPNPEKYQESPGIQMK ddPTM_KYSE-520_SHP099_60min_R1 2 ISLEQPPNGSDTPNPEKYQESPGIQMK 27 1 E9PJ60;Q9UHI6 E9PJ60 DDX20 Probable ATP-dependent RNA helicase DDX20 1 ISLEQPPNGS(0.934)DT(0.066)PNPEKYQESPGIQMK;ISLEQPPNGS(0.997)DT(0.003)PNPEKYQESPGIQMK 162.29 3.3624e-10 999690000.0 903140.0 947010.0 839950.0 614950.0 636050.0 720040.0 550230.0 571670.0 1044830.0 698440.0 True False 853041.0238350448 901514.2181090104 894094.5209675169 673394.6631085406 686103.516370547 715545.9632747242 605852.6181273094 569687.0101987807 855115.2100209043 692252.3649780983 1.2322688473040226 1.3022912794780164 1.2915730825936644 0.9727589202672433 0.99111761993367 1.03364899778618 0.8751903912187826 0.8229470046184741 1.2352651334718932 1.0 19.400938551792247 -5.262191776734695 24.936380994992906 0.9798203349351001 1.2780691052792428 0.6135086148045623 0.10351699689344238 40.451664621094054 1340689.794791524 0.028416754796576894 0.04510140419442859 5.467744636788299e-06 5.262191776734695 0.29824877034414266 ISLPGQMAGTPIT(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 1 ISLPGQMAGTPITPLK 16 0 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 ISLPGQMAGT(0.079)PIT(0.921)PLK 255.72 9.6895e-21 0.0 188670.0 289650.0 157850.0 184580.0 240450.0 312390.0 242650.0 305250.0 226360.0 289270.0 True False 178204.09899567955 275734.7792264864 168025.26356892998 202122.4277039993 259372.04702664554 310440.2581348129 267179.4300357877 304191.1589958853 185258.730071238 286707.29284865485 0.6215541196217452 0.9617292133968822 0.5860515855717212 0.7049783271843537 0.9046580031138627 1.0827776825986983 0.931889200937852 1.06098158848181 0.6461598106924722 1.0 18.129219076687985 -5.83692696126051 4.944044105466468 0.9514088111596324 0.7265649083501193 0.35231185000641596 0.145712420086781 0.23295034792638653 10.348650983230295 0.044421411948899536 0.05134131450109669 1.455703877236364e-06 5.83692696126051 -0.22484390280951305 ISLS(ph)KSPTK ddPTM_KYSE-520_SHP099_60min_R1 1 ISLSKSPTK 9 1 A0A0A0MRN4;Q5BKZ1-3;Q5BKZ1 A0A0A0MRN4 ZNF326 DBIRD complex subunit ZNF326 1 IS(0.007)LS(0.563)KS(0.425)PT(0.006)K 71.085 0.040348 348950000.0 1708800.0 1590400.0 1493200.0 1214900.0 1429900.0 1425900.0 1315500.0 1436000.0 1964400.0 1424400.0 True False 1614009.457591652 1513994.7967609307 1589454.0612044726 1330363.7307269971 1542424.9949819094 1417000.4291892499 1448483.5780427728 1431018.8511649212 1607714.4784941692 1411780.9241664307 1.143243565601104 1.0724006613525048 1.1258503596391536 0.9423301504888194 1.0925384870833383 1.0036971069189797 1.0259974145053792 1.0136267084143025 1.1387846732972575 1.0 20.42908480231005 -5.191187454819597 24.999999600429874 1.0327813651908504 1.1096885890911725 0.33782071673578506 0.053009472947849 192.52245644787706 68510.47637201831 0.013597390393404674 0.023551367229274447 6.438912822987959e-06 5.191187454819597 0.07690722390032212 ISLS(ph)KSPTKTDPKNEEEEK ddPTM_KYSE-520_SHP099_60min_R1 1 ISLSKSPTKTDPKNEEEEK 19 3 A0A0A0MRN4;Q5BKZ1-3;Q5BKZ1 A0A0A0MRN4 ZNF326 DBIRD complex subunit ZNF326 1 IS(0.077)LS(0.459)KS(0.459)PT(0.003)KT(0.003)DPKNEEEEK 59.81399999999999 0.032641 930900000.0 333000.0 438630.0 405920.0 265890.0 295070.0 264040.0 197410.0 198230.0 620660.0 213970.0 True False 314527.8261809578 417557.55640294706 432086.25269496324 291160.10565725673 318290.330281357 262392.02841933473 217366.12933593598 197542.3863972298 507963.7895653595 212074.39226614084 1.4831013910733923 1.9689202073908902 2.0374277539021333 1.3729149594443633 1.5008428263320044 1.2372640827377603 1.0249522679907261 0.9314768477531495 2.395215113609261 1.0 17.694210902089633 -5.323494862553902 7.462691983778419 1.3352531961432001 1.8429626395659795 0.21765117910251797 0.4143271765435454 0.4012548472888826 42.99005609558995 0.1155086592709967 0.17224747606771243 4.74793907438655e-06 5.323494862553902 0.5077094434227793 ISLSKS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 2 ISLSKSPTK 9 1 A0A0A0MRN4;Q5BKZ1-3;Q5BKZ1 A0A0A0MRN4 ZNF326 DBIRD complex subunit ZNF326 1 ISLS(0.039)KS(0.959)PT(0.003)K;ISLS(0.012)KS(0.986)PT(0.002)K 221.27 6.854200000000001e-09 15986200000.0 15332000.0 13941300.0 13542800.0 11718600.0 11511700.0 12050700.0 11371100.0 11859600.0 16161700.0 12656800.0 True False 14481503.396415738 13271539.021682078 14415790.557246145 12832332.220674448 12417605.297386715 11975487.111319799 12520601.759241486 11818461.81565144 13227142.68330239 12544670.59884138 1.1543948708986622 1.0579424080619408 1.1491565636309 1.022930982489061 0.9898709734581312 0.9546274664578159 0.9980813494136612 0.9421101751960699 1.0544033483449173 1.0 23.580571252801807 -5.43236200484736 3.9203623213797174 0.9866085898051402 1.113764558611193 0.70562096051538 0.03758157854537782 0.12172148248807939 3.4013656556022798 0.010310761303796497 0.015498790171384648 3.6952003906611327e-06 5.43236200484736 0.12715596880605284 ISLSKS(ph)PTKTDPK ddPTM_KYSE-520_SHP099_60min_R1 2 ISLSKSPTKTDPK 13 2 A0A0A0MRN4;Q5BKZ1-3;Q5BKZ1 A0A0A0MRN4 ZNF326 DBIRD complex subunit ZNF326 1 ISLS(0.002)KS(0.785)PT(0.213)KTDPK;ISLSKS(0.5)PT(0.5)KTDPK 178.67 3.432e-07 22376600000.0 9242780.0 8506630.0 9339210.0 6128840.0 6772940.0 6332930.0 5610510.0 5943850.0 9575100.0 5744360.0 True False 8730064.568374867 8097958.726088057 9941230.419864336 6711323.110897068 7305931.845242864 6293403.834788895 6177675.104100929 5923232.171655012 7836503.208628338 5693469.439444452 1.5333470498485218 1.4223240876617802 1.7460760131583961 1.1787756450225075 1.2832126215743334 1.1053723747400992 1.085045800246488 1.0403554870460463 1.3764020852271397 1.0 22.440876627429663 -5.332588478324683 7.983543035431868 1.1539876098495614 1.5521473257860163 0.6855419303949373 0.1285443829643272 0.17713059388468988 18.174598464667547 0.03557486423534778 0.05291487879740618 4.649556416287016e-06 5.332588478324683 0.39815971593645494 ISMPDFDLHLK ddPTM_KYSE-520_SHP099_60min_R1 2 ISMPDFDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 122.33 0.00035905 624290000.0 839440.0 935090.0 636160.0 698690.0 1034710.0 941670.0 679870.0 735920.0 780470.0 624890.0 False True 792874.5898178464 890166.8728012958 677167.8914919887 765093.2875311909 1116135.790305429 935792.6882352497 748597.8944917837 733367.2652850185 638756.3220476197 619353.9607570628 1.2801639128111524 1.4372506340529523 1.0933455413189859 1.2353086215772071 1.802096799286031 1.5109174196470632 1.2086753971456654 1.1840842422136002 1.0313267735736131 1.0 19.24040461970952 -7.293668303888479 1.873789281011194 1.0315441177913311 1.3874948543314622 0.39188862186004714 0.18154286569965994 0.4316592160813709 2.7866634943327715 0.15128052566756955 0.05885519047963683 5.085477019145669e-08 7.293668303888479 0.3559507365401311 ISMPDIDLNLT(ph)GPK ddPTM_KYSE-520_SHP099_60min_R1 4 ISMPDIDLNLTGPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMPDIDLNLT(1)GPK;ISMPDIDLNLT(1)GPK;ISMPDIDLNLT(1)GPK;ISMPDIDLNLT(1)GPK 288.25 4.6798e-32 814981000.0 878036.0 1050609.0 792725.0 748317.0 690798.0 924334.0 697859.0 944921.0 1083844.0 905860.0 True False 829329.5927586281 1000136.1666437412 843825.321904846 819436.8226902891 745159.8724970372 918564.8886417126 768405.3981675038 941643.2895972204 887045.2510838081 897834.7851484148 0.9236995563961552 1.1139423234514307 0.9398447641626618 0.9126810814696089 0.8299521079191201 1.023088995699661 0.8558427573514921 1.0487935031850697 0.9879827177081103 1.0 19.77609046664588 -9.488395055818883 9.802425821644741 1.000008501692123 0.9597537928020287 0.021183649043771458 0.08250363109090245 0.0 0.0 0.08018606130395267 0.019447976497555877 3.2479171630057035e-10 9.488395055818883 -0.040254708890094304 ISMPDLDLHLKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 12 ISMPDLDLHLKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;IS(0.001)MPDLDLHLKS(0.999)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK;ISMPDLDLHLKS(1)PK 240.59 1.2478e-18 53553129000.0 28146288.0 31935388.0 29476369.0 36833428.0 40218616.0 43640141.0 48950171.0 61417420.0 81008220.0 58483110.0 True False 26584957.29640595 30401164.024485327 31376462.909597967 40334065.922746025 43383592.26657771 43367766.69253067 53898531.99231134 61204377.30495357 66299169.299043514 57964995.14457108 0.45863813548332294 0.5244745375836136 0.5413001904225406 0.6958348883174823 0.7484446804209033 0.7481716609199515 0.9298462262936876 1.0558851450311193 1.1437794333232685 1.0 25.78867858898531 -6.269009671696432 0.6248296755032922 1.1039496419949684 0.470391108552262 0.9305418917005217 0.05973464777577687 0.19917873313200068 0.1697043849854678 0.0503337922377304 0.0546584004390022 5.382577954333661e-07 6.269009671696432 -0.6335585334427063 down ISMPDVDLHLK ddPTM_KYSE-520_SHP099_60min_R1 2 ISMPDVDLHLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 139.32 0.00016790000000000002 529520000.0 1511360.0 1717310.0 1197570.0 1313710.0 1771570.0 1661870.0 1263170.0 1500050.0 1477550.0 1268550.0 False True 1427521.8479785346 1634807.8498651392 1274767.2783797493 1438564.6034186876 1910982.4801455382 1651497.652890624 1390863.5509511908 1494846.6766643007 1209264.1660044082 1257311.6339169657 1.1353763136123258 1.300240772267525 1.0138833078386487 1.1441591444891475 1.5198956476622738 1.3135149698294217 1.1062202189429873 1.1889229657466305 0.9617855537032829 1.0 20.261910845959722 -7.606473167309369 1.797921118807263 0.9755964634071302 1.2299101504247452 0.32132976119286993 0.13356944698530474 0.45842234480859506 2.6899043049747373 0.129180420776406 0.04029155376786159 2.4747243563497553e-08 7.606473167309369 0.2543136870176149 ISMQDVDLSLGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 19 ISMQDVDLSLGSPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLS(0.002)LGS(0.998)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLSLGS(1)PK;ISMQDVDLS(0.001)LGS(0.999)PK 269.59 6.901e-25 35286030000.0 22295470.0 24184080.0 22096030.0 19201920.0 20848850.0 27811450.0 25829080.0 31311650.0 40399740.0 33211660.0 True False 21058695.834182438 23022240.495755862 23520375.448697995 21026864.703532215 22489535.881270476 27637868.42441642 28440135.473928608 31203037.194344033 33064165.610568125 32917430.530680507 0.6397430022539213 0.6993936077209341 0.7145264703080625 0.6387760030034617 0.6832105519387132 0.839611961773769 0.8639840660534284 0.94791837307172 1.0044576711341686 1.0 24.97234839045345 -6.734445905363442 1.074352238033545 0.998496638939312 0.6695525568247016 0.9488833646873331 0.03132699380096974 0.11139088125278752 0.2562701266748133 0.023098606214260825 0.013427222175232885 1.8431220493550963e-07 6.734445905363442 -0.32894408211461035 ISMS(ph)EVDLNVAAPK ddPTM_KYSE-520_SHP099_60min_R1 1 ISMSEVDLNVAAPK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 IS(0.039)MS(0.961)EVDLNVAAPK 181.58 8.2937e-09 0.0 122670.0 95469.0 76388.0 71963.0 75310.0 75261.0 67508.0 123640.0 87047.0 87557.0 True False 115865.25056341747 90882.52593810948 81312.09270512145 78802.34188353513 81236.46854471475 74791.26818234951 74332.36745458882 123211.121697793 71241.45907629919 86781.31309831512 1.3351405553422886 1.0472591701297267 0.936976980435897 0.9080565742795277 0.9361055467400156 0.861836097105583 0.856548083921906 1.4197886307413476 0.8209308724746913 1.0 16.4050967954586 -4.282928722841891 2.9417007151750765 0.9719143495718026 1.387346170421069 0.3206044365095576 0.16015002072151457 0.4507267392885416 5.823198391559133 0.04126401674065323 0.43193595927125517 5.212802574982433e-05 4.282928722841891 0.41543182084926644 ISNLS(ph)PEEEQGLWK ddPTM_KYSE-520_SHP099_60min_R1 14 ISNLSPEEEQGLWK 14 0 F5GX09;Q5HYJ3-3;Q5HYJ3-2;Q5HYJ3 F5GX09 FAM76B Protein FAM76B 1 ISNLS(1)PEEEQGLWK;ISNLS(1)PEEEQGLWK;ISNLS(1)PEEEQGLWK;ISNLS(1)PEEEQGLWK;ISNLS(1)PEEEQGLWK;IS(0.151)NLS(0.849)PEEEQGLWK;ISNLS(1)PEEEQGLWK;ISNLS(1)PEEEQGLWK;ISNLS(1)PEEEQGLWK;ISNLS(1)PEEEQGLWK;ISNLS(1)PEEEQGLWK;ISNLS(1)PEEEQGLWK;ISNLS(1)PEEEQGLWK;ISNLS(1)PEEEQGLWK 385.73 1.8985999999999998e-81 26708350000.0 19175150.0 18487570.0 16869230.0 15039230.0 15730680.0 17302630.0 15497000.0 16892890.0 20805870.0 17202280.0 True False 18111466.204786167 17599399.386791665 17956647.557522327 16468553.897490641 16968595.02067421 17194637.868085265 17063587.99614508 16834292.507420182 17028048.481300883 17049881.18237132 1.062263485068299 1.0322300313147355 1.0531831492226795 0.9659043204663655 0.9952324499609326 1.0084901873605792 1.0008039242987765 0.987355414818137 0.9987194807496366 1.0 24.023258349607556 -5.245655443882327 24.98472167687338 0.9942249711013085 1.0475260088564087 0.7977535679247173 0.01278186149812091 355.7625907871586 563143.3430711863 0.0034648345078692414 0.0059777950558036275 5.679950568110624e-06 5.245655443882327 0.0533010377551002 ISNYGWDQSDKFVK ddPTM_KYSE-520_SHP099_60min_R1 2 ISNYGWDQSDKFVK 14 1 Q9HB71-3;Q9HB71 Q9HB71-3 CACYBP Calcyclin-binding protein 0 ; 136.01 7.9968e-06 1135780000.0 1235880.0 1079280.0 772420.0 740860.0 1226180.0 1053370.0 747350.0 779610.0 836410.0 888680.0 False True 1167323.2727343 1027429.768767693 822211.4291156963 811271.1116523186 1322673.3899901537 1046795.5271022372 822899.4314331177 776905.7148723427 684539.0281802635 880806.9865825772 1.3252883895294367 1.1664641452879412 0.9334751445441817 0.9210543558469612 1.5016608747870674 1.188450526674039 0.9342562490629943 0.8820385472720207 0.7771725685739513 1.0 19.748466386876856 -6.836263757258961 4.636732585184204 0.8800865410856314 1.1651068401773281 0.39427433184352456 0.16684611252670406 0.2427182672410341 9.705587368497673 0.07713176574022529 0.05177692310661607 1.4579285570267505e-07 6.836263757258961 0.2850202990916967 ISQDADLKT(ph)PTKPK ddPTM_KYSE-520_SHP099_60min_R1 2 ISQDADLKTPTKPK 14 2 Q9P0K7-3;Q9P0K7;Q9P0K7-2;Q9P0K7-4 Q9P0K7-3 RAI14 Ankycorbin 1 ISQDADLKT(1)PTKPK;ISQDADLKT(0.996)PT(0.004)KPK 193.22 1.798e-10 4850000000.0 4502400.0 3715200.0 3347200.0 2891900.0 3494000.0 5208900.0 4429500.0 6075300.0 7038300.0 5951800.0 True False 4252642.896688118 3536716.2153711054 3562965.8677093596 3166745.3065185603 3768957.92185943 5176389.322956657 4877277.087754056 6054226.202285683 5760322.141104411 5899071.682430333 0.7209003595182776 0.599537758780722 0.6039875525366507 0.536820957092338 0.6389069543068636 0.877492188876752 0.826787221840418 1.0263015145785495 0.9764794278158764 1.0 22.492056509471944 -6.525650851215897 1.3921445662497491 0.988417520805919 0.6067923439460435 0.8715665453475077 0.06263285414860546 0.14126459385417178 0.5564658645743947 0.03398330820418558 0.02460490086373942 2.9809119549873113e-07 6.525650851215897 -0.3816251768598755 ISQNFLSSINEEIT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 ISQNFLSSINEEITPR 16 0 P11274;P11274-2;H0Y554 P11274 BCR Breakpoint cluster region protein 1 ISQNFLSSINEEIT(1)PR;ISQNFLSSINEEIT(1)PR 273.8 4.9981999999999995e-29 301270000.0 210994.0 265320.0 179406.0 135872.0 161593.0 192653.0 146000.0 218940.0 219580.0 207581.0 True False 199289.74221388865 252573.62894656076 190970.79781974916 148785.23402859346 174309.44976160018 191450.58116599824 160759.1048226872 218180.5482409799 179709.807161347 205741.99383557434 0.9686391120188996 1.2276231227175407 0.9282052451205947 0.723164149694691 0.8472234885645439 0.9305372111782023 0.7813626271706264 1.0604570519295455 0.8734716904948835 1.0 17.6504767656988 -4.924949051923492 7.797870302480051 0.8816182366015579 1.095973103417015 0.3660385706279753 0.10880853845401982 0.23196806564609082 20.814853135828038 0.027837670904648178 0.058383235601868616 1.1886416615233735e-05 4.924949051923492 0.21435486681545712 ISQRDPS(ph)PESNK ddPTM_KYSE-520_SHP099_60min_R1 5 ISQRDPSPESNK 12 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 ISQRDPS(0.996)PES(0.004)NK;ISQRDPS(0.995)PES(0.005)NK;ISQRDPS(0.983)PES(0.017)NK;ISQRDPS(0.853)PES(0.147)NK;ISQRDPS(0.983)PES(0.017)NK 211.82 1.917e-10 2772140000.0 4436810.0 4322910.0 4136940.0 3586250.0 3770070.0 3696240.0 3213800.0 3181760.0 5273710.0 3564200.0 True False 4190691.3047385467 4115230.9147797977 4403613.771738036 3927086.1217546174 4066753.060235996 3673170.3951093885 3538682.2676654267 3170723.2171883653 4316137.203410454 3532623.9609056395 1.1862828738964342 1.164921871198767 1.2465560502536774 1.111662652242174 1.151198968597106 1.039785280222047 1.0017149594258636 0.8975546937001199 1.2217935594548675 1.0 21.752308755402442 -6.104158861058135 1.6707317355064606 1.0201472083822374 1.1865233243703641 0.4290693066456671 0.08101248197370857 0.3388320573598658 1.892856413964437 0.03172914570680766 0.032468414528379716 7.867579479947128e-07 6.104158861058135 0.16637611598812674 ISQRDPS(ph)PESNKK ddPTM_KYSE-520_SHP099_60min_R1 2 ISQRDPSPESNKK 13 2 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 IS(0.021)QRDPS(0.768)PES(0.211)NKK;IS(0.003)QRDPS(0.77)PES(0.227)NKK 57.498999999999995 0.037739 934360000.0 638370.0 641120.0 651010.0 435480.0 509590.0 494160.0 445390.0 473280.0 784140.0 497540.0 True False 602958.3435409539 610319.6328592608 692975.1462528292 476867.8882681643 549691.833829521 491075.7641406555 490414.3677875117 471638.30214438285 641759.9425607907 493132.18268026237 1.2227114041995122 1.2376390231561516 1.4052523250183842 0.967018387800815 1.1146947068874042 0.9958298837272598 0.9944886685797328 0.95641355139497 1.301395376535171 1.0 18.91161488318365 -5.268058868825578 24.955012531856973 1.0437895197687166 1.2834447303291323 0.5214261489828431 0.10591918149402277 388.6109342598286 1465036.352853572 0.028956138886007232 0.04410920269452987 5.394374965474055e-06 5.268058868825578 0.23965521056041572 ISQRDPSPES(ph)NK ddPTM_KYSE-520_SHP099_60min_R1 1 ISQRDPSPESNK 12 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 ISQRDPS(0.248)PES(0.752)NK 174.37 2.3950999999999997e-06 440660000.0 921220.0 782020.0 814460.0 636540.0 664660.0 758820.0 660500.0 604920.0 966830.0 696160.0 True False 870118.0901934586 744450.5853640483 866961.3947820748 697036.5702172712 716964.960601915 754083.9229100135 727269.7858588009 602821.6737093892 791278.043800916 689992.5640042847 1.261054300562079 1.0789255192022988 1.256479330372452 1.010208814674911 1.039090851126133 1.092887028425035 1.0540255414321895 0.8736640148858847 1.146792132380143 1.0 19.396221288600156 -4.430867380033613 0.4879744001230583 1.008314290345154 1.3555511288340116 0.39582168414343233 0.08680978640972009 4.068763625762673 0.8433333308305345 0.05635316060341268 0.8003462062278803 3.707939333788292e-05 4.430867380033613 0.34723683848885756 ISQRDPSPES(ph)NKK ddPTM_KYSE-520_SHP099_60min_R1 1 ISQRDPSPESNKK 13 2 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;Q8NDX5-3 E7EX82 PHC3 Polyhomeotic-like protein 3 1 IS(0.001)QRDPS(0.396)PES(0.604)NKK 70.41 0.017263999999999998 548490000.0 859630.0 870600.0 821350.0 688360.0 747240.0 705430.0 531380.0 625050.0 1041700.0 684120.0 True False 811944.61027008 828775.0692027585 874295.5352064654 753781.5274370197 806043.536785987 701027.1497040287 585097.0761690371 622881.8474377665 852553.5391200243 678059.2290373066 1.197453814503581 1.2222753318754098 1.2894087975880377 1.1116750501386463 1.18875092656786 1.0338730300881407 0.8628996570104133 0.9186245401041444 1.257343757905133 1.0 19.371051773913845 -6.277813624933035 3.528117930652569 0.9963441598523926 1.2057813646109576 0.4466200314406419 0.10411962013162604 0.22192845095280297 5.95288886220048 0.03848317551624167 0.03541555148614685 5.274561677477792e-07 6.277813624933035 0.2094372047585651 ISRPGDS(ph)DDSR ddPTM_KYSE-520_SHP099_60min_R1 2 ISRPGDSDDSR 11 1 P14866;M0QXS5;P14866-2;A0A3B3ITJ4;B4DVF8;M0QYL7;M0R1W6 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 IS(0.013)RPGDS(0.986)DDS(0.001)R;IS(0.003)RPGDS(0.997)DDSR 131.32 0.00022074 1134370000.0 1123800.0 1115390.0 1037020.0 982520.0 1089900.0 1070310.0 1019130.0 948030.0 1222300.0 1095400.0 True False 1061460.5737602403 1061804.9901654762 1103867.9684906672 1075898.4053945902 1175668.929317285 1063629.7982786638 1122153.6061503084 944741.5052018664 1000361.1316755359 1085695.608208305 0.9776778737384237 0.9779951048321409 1.016737988203113 0.9909761053285618 1.0828715898164687 0.9796758780612037 1.0335803126275596 0.8701716190608421 0.9214011036909375 1.0 20.050188246975527 -7.250340261281965 24.96264801988102 0.9218397690552166 1.008723125380201 0.41031368444674543 0.042456620749185894 594.2259958891879 1336456.5036307622 0.019617120840678817 0.011185591612754417 5.6190091424569966e-08 7.250340261281965 0.08688335632498434 ISRPGDSDDSR ddPTM_KYSE-520_SHP099_60min_R1 3 ISRPGDSDDSR 11 1 P14866;M0QXS5;P14866-2;A0A3B3ITJ4;B4DVF8;M0QYL7;M0R1W6 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 ;; 113.77 0.00030582 2028070000.0 1796890.0 1934490.0 1276640.0 1185180.0 1751020.0 1852300.0 1306180.0 1600110.0 1643170.0 1665960.0 False True 1697212.9296885913 1841554.196671311 1358934.2570962228 1297819.1508626412 1888815.3120590434 1840739.1086242022 1438221.421488339 1594559.5918784826 1344811.7489448497 1651200.8904972663 1.0278658032805859 1.1152817366254684 0.8229975316249822 0.7859850114735568 1.1439040052178135 1.1147881031422262 0.8710154105205288 0.9656969064486599 0.8144446606614013 1.0 20.655084223247666 -6.821388420508854 24.999996242885373 0.9099306165288985 0.9954872126011597 0.11298396939463018 0.12130860357402008 199.59657380579645 83233.42258868313 0.054698784407748294 0.03687792642069346 1.5087301856301053e-07 6.821388420508854 0.08555659607226118 ISS(ph)EKQEAK ddPTM_KYSE-520_SHP099_60min_R1 6 ISSEKQEAK 9 1 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 IS(0.018)S(0.982)EKQEAK;IS(0.274)S(0.726)EKQEAK;IS(0.01)S(0.99)EKQEAK;IS(0.225)S(0.775)EKQEAK;IS(0.056)S(0.944)EKQEAK;IS(0.304)S(0.696)EKQEAK 188.29 3.5877e-06 6703010000.0 7349750.0 6555190.0 6233190.0 7140800.0 7295080.0 6861500.0 6534710.0 5753200.0 7763610.0 7920990.0 True False 6942044.716136619 6240268.832859206 6634991.400856626 7819459.485040196 7869161.292672667 6818674.833355811 7195302.259423709 5733243.492006979 6353934.128681586 7850816.191036974 0.8842449685756406 0.7948560609511558 0.8451339630689079 0.9960059304365606 1.002336712666466 0.8685306938074127 0.9165037219491083 0.7302735604168697 0.809334211127713 1.0 22.90441121741132 -9.482946486263835 10.512913362237173 0.9999994329928429 0.8733911797734113 0.18441726831287253 0.08075495728950198 0.0 0.0 0.08647960690267946 0.020974385513037742 3.2889215444790763e-10 9.482946486263835 -0.1266082532194316 ISS(ph)KS(ph)PGHMVILDQTK ddPTM_KYSE-520_SHP099_60min_R1 6 ISSKSPGHMVILDQTK 16 1 Q9NWH9;Q9NWH9-3 Q9NWH9 SLTM SAFB-like transcription modulator 2 IS(0.135)S(0.88)KS(0.984)PGHMVILDQTK;IS(0.078)S(0.961)KS(0.961)PGHMVILDQTK;IS(0.056)S(0.971)KS(0.973)PGHMVILDQTK;IS(0.651)S(0.696)KS(0.653)PGHMVILDQTK;IS(0.087)S(0.918)KS(0.994)PGHMVILDQTK;IS(0.153)S(0.857)KS(0.99)PGHMVILDQTK 181.87 2.5083e-09 8044060000.0 10088900.0 9635500.0 8930200.0 10183200.0 9082800.0 9066500.0 9159800.0 9888500.0 11099200.0 9438500.0 True False 9529248.605276464 9172596.116819631 9505854.980825191 11151008.266309278 9797564.68593728 9009912.610452596 10085761.975033224 9854199.101493256 9083865.068062758 9354882.233041883 1.0186390772102625 0.9805143334056726 1.0161383910585284 1.1919987861443508 1.047321007562428 0.9631241084606241 1.0781281606528235 1.053375003128074 0.9710293343916314 1.0 23.157288061071807 -9.161231821092246 12.703548528839574 0.9999997861241485 1.0379824822486967 0.02654541616553241 0.06316427393576465 0.0 0.0 0.06369214068168304 0.01544761315013405 6.89871460577234e-10 9.161231821092246 0.03798269612454819 ISS(ph)LLEEQFQQGK ddPTM_KYSE-520_SHP099_60min_R1 8 ISSLLEEQFQQGK 13 0 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 1 IS(0.037)S(0.963)LLEEQFQQGK;IS(0.002)S(0.998)LLEEQFQQGK;IS(0.06)S(0.94)LLEEQFQQGK;IS(0.003)S(0.997)LLEEQFQQGK;IS(0.001)S(0.999)LLEEQFQQGK;ISS(1)LLEEQFQQGK;ISS(1)LLEEQFQQGK;IS(0.012)S(0.988)LLEEQFQQGK 359.86 2.7409999999999995e-64 1760723000.0 5169110.0 5310050.0 4374020.0 3862540.0 4028920.0 4994330.0 4110200.0 4698710.0 5791680.0 5107490.0 True False 4882369.163934684 5054947.2274524495 4655976.327879443 4229634.640285003 4345973.082580963 4963158.533917355 4525699.127686359 4682411.271697161 4740056.908371567 5062241.612167095 0.9644678263083913 0.9985590603385833 0.9197459711699273 0.8355260306262503 0.8585076366436993 0.9804270349302188 0.894010889723012 0.9249679549950733 0.9363553286312615 1.0 22.271344935792282 -8.269166015533681 2.0832566770302625 0.9999665711142657 0.920480608049916 0.18806275111427517 0.048371924558197055 2.2303978449031487 14.255126403969586 0.05090639077920457 0.014042279985938419 5.380640601981524e-09 8.269166015533681 -0.07948596306434963 ISS(ph)PTETER ddPTM_KYSE-520_SHP099_60min_R1 1 ISSPTETER 9 0 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 1 IS(0.005)S(0.986)PT(0.009)ETER 121.36 0.00097366 0.0 825020.0 744520.0 613660.0 683670.0 852210.0 882470.0 766000.0 679220.0 911980.0 895410.0 True False 779254.4959634037 708752.141652697 653217.5054907162 748645.7912471186 919274.0785883872 876962.1773943752 843434.7554395789 676863.944351139 746387.4211449359 887477.3640184391 0.8780556299881167 0.798614331348705 0.7360384974023341 0.8435660689499727 1.0358281978325337 0.9881516001980583 0.9503732597984943 0.7626830517528286 0.841021361677714 1.0 19.7593507970572 -5.533970052202371 24.95795159177293 0.9233988599618677 0.8013620092579196 0.33249152290684936 0.08136391823894779 276.40221575953615 621964.4428196718 0.026493786618396443 0.03423327430175039 2.924354026601792e-06 5.533970052202371 -0.1220368507039481 ISS(ph)YPEDNFPDEEK ddPTM_KYSE-520_SHP099_60min_R1 1 ISSYPEDNFPDEEK 14 0 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 IS(0.058)S(0.942)YPEDNFPDEEK 198.85 2.2538000000000002e-09 0.0 142120.0 115190.0 106270.0 135380.0 106890.0 141940.0 117720.0 137970.0 175940.0 152070.0 True False 134236.32029080403 109656.09949628508 113120.33423801191 148246.4744965189 115301.6348790939 141054.09981003028 129620.28643648444 137491.41427244016 143993.73108647112 150722.77810866965 0.8906173438099778 0.7275350207333898 0.7505191694148131 0.9835704752577917 0.7649914387589283 0.9358512467726122 0.8599913567346104 0.9122139068675486 0.9553548102905391 1.0 17.201537936370258 -6.9313271732396915 0.335748046918164 1.0093130116210074 0.7788329172485037 0.38366471609649844 0.07392832853816195 1.5319515205564442 0.48104515065733394 0.10020408808140395 0.1251006465606955 1.171312631482515e-07 6.9313271732396915 -0.23048009437250372 ISSGKSS(ph)PFK ddPTM_KYSE-520_SHP099_60min_R1 1 ISSGKSSPFK 10 1 O95810 O95810 SDPR Serum deprivation-response protein 1 IS(0.001)S(0.001)GKS(0.014)S(0.985)PFK 71.513 0.014363999999999998 474400000.0 1268100.0 1329100.0 1377600.0 898340.0 994160.0 1005100.0 814540.0 851290.0 1415300.0 822350.0 True False 1197755.9651053234 1265248.0409802278 1466402.3002379334 983717.9635042305 1072394.7360033689 998826.7980770859 896881.6523443267 848337.0736825798 1158317.19680961 815064.6187786189 1.4695227071691208 1.5523285047953774 1.7991239791948637 1.2069202132443684 1.3157174428824567 1.2254571908345575 1.100381039344232 1.0408218614050748 1.421135416901494 1.0 19.636554915984075 -5.2829080421633785 23.234269360378228 1.192236444562756 1.6015253243025764 0.6533894782490278 0.14006085366108273 191.3378515836105 207073.2244955849 0.03929393982322148 0.05836718995852023 5.2130508094535225e-06 5.2829080421633785 0.4092888797398204 ISSIQSIVPALEIANAHR ddPTM_KYSE-520_SHP099_60min_R1 2 ISSIQSIVPALEIANAHR 18 0 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 149.52 6.1222000000000004e-06 277020000.0 214720.0 304010.0 223530.0 291360.0 320050.0 342430.0 207560.0 240090.0 230940.0 186308.0 False True 202809.05356629204 289404.90327168675 237939.10146064535 319050.7667994215 345236.11416459916 340292.76735204086 228542.1903903903 239257.1838274273 189007.1175236426 184657.4560654309 1.0982987521198677 1.5672527361643063 1.2885431573168367 1.7277979107779442 1.8696028934909046 1.8428325322074333 1.237654819144749 1.2956811434825017 1.0235552982852232 1.0 17.49449199103639 -7.243413085399513 1.8864752494937111 1.053940027035551 1.5662650205873083 0.43278959348998025 0.23747129032092756 0.3748566422822302 2.4795906220531325 0.18488008083524698 0.07541858063685779 5.709353250344117e-08 7.243413085399513 0.5123249935517573 ISSLPVSRPIS(ph)PSPSAILER ddPTM_KYSE-520_SHP099_60min_R1 2 ISSLPVSRPISPSPSAILER 20 1 Q5T5P2-3;Q5T5P2;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-10;Q5T5P0;Q5T5P1 Q5T5P2-3 KIAA1217 Sickle tail protein homolog 1 ISSLPVSRPIS(0.837)PS(0.13)PS(0.032)AILER;ISSLPVSRPIS(0.976)PS(0.019)PS(0.005)AILER 163.46 5.385e-09 2247480000.0 1053300.0 1187750.0 866400.0 876520.0 773530.0 996310.0 700320.0 927430.0 1213390.0 928400.0 True False 994871.3492985067 1130688.707150902 922249.5302890136 959824.1972646536 834402.4102163501 990091.6597275696 771115.1800645506 924212.9617937902 993068.9630727142 920175.0982842693 1.0811761274060923 1.2287755985346158 1.0022543883317558 1.0430886459047988 0.9067865580932929 1.0759818012611562 0.8380091805378658 1.0043881469049203 1.0792173847394486 1.0 19.81154888929147 -4.831735211349719 7.923472263968592 0.9893339692785945 1.1543807923682838 0.4107256548092141 0.07716385627707786 0.19985013187359468 19.53213876189054 0.019540244062064477 0.04113125391043542 1.4732104427167382e-05 4.831735211349719 0.16504682308968932 ISSPTETER ddPTM_KYSE-520_SHP099_60min_R1 1 ISSPTETER 9 0 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 0 136.27 0.0052653 0.0 133480.0 136580.0 126690.0 91050.0 123740.0 158330.0 104410.0 117730.0 170260.0 128410.0 False True 126075.59831421693 130018.49178924058 134856.6401111672 99703.36462481941 133477.6340157087 157341.8037404686 114964.78174340237 117321.62210838863 139345.07590532326 127272.38730146816 0.9905966328390116 1.0215765928965233 1.0595907169693795 0.7833856717769706 1.0487556401338043 1.236260331691394 0.9032971265879303 0.9218152074926567 1.0948570924128163 1.0 16.95755992412101 -3.938031906355144 12.830633449141953 1.0051149096192389 0.9001394575053322 0.001520403133035031 0.11537794346429171 12721215.805495309 83456318.57120237 0.029353162181342773 32925329.423398923 0.00011533685200706338 3.938031906355144 -0.10497545211390669 IST(ph)PLTGVR ddPTM_KYSE-520_SHP099_60min_R1 3 ISTPLTGVR 9 0 Q08999;F5H837;Q08999-2 Q08999 RBL2 Retinoblastoma-like protein 2 1 IS(0.003)T(0.997)PLTGVR;IS(0.026)T(0.974)PLTGVR;IS(0.058)T(0.942)PLTGVR 214.71 3.3095e-08 1094630000.0 2666300.0 3144240.0 2112310.0 2034350.0 2201390.0 2940390.0 2173560.0 2720380.0 3280020.0 2788040.0 True False 2518395.0238627233 2993185.9907995444 2248472.882415497 2227694.012350371 2374626.8688042727 2922037.9353277134 2393284.656701372 2710943.636721464 2684451.050575464 2763340.1346622966 0.9113590441773438 1.0831768240377462 0.8136793781596052 0.8061599020717781 0.8593320956106159 1.0574297020749532 0.8660839925859694 0.9810387084515616 0.97145154767693 1.0 21.397981721191893 -6.227373725101649 24.989070668107587 0.9671959760717009 0.8957854376732214 0.18234127851947157 0.08432832364185637 1348.6656602644036 989322.4874126215 0.029512539747139084 0.0295109514042504 5.924153117420289e-07 6.227373725101649 -0.07141053839847955 IST(ph)PQTNTVPIKPLIS(ph)TPPVSSQPK ddPTM_KYSE-520_SHP099_60min_R1 1 ISTPQTNTVPIKPLISTPPVSSQPK 25 1 Q9BTA9-2;Q9BTA9;A0A0A0MRT2;Q9BTA9-5 Q9BTA9-2 WAC WW domain-containing adapter protein with coiled-coil 2 IS(0.157)T(0.841)PQT(0.001)NT(0.001)VPIKPLIS(0.532)T(0.453)PPVS(0.013)S(0.003)QPK 121.39 0.00017843 392220000.0 603790.0 617920.0 520520.0 581400.0 558210.0 576260.0 524330.0 615590.0 726690.0 552200.0 True False 570296.565074476 588234.1956831706 554073.5520614471 636656.0811957167 602137.951219562 572663.3475872058 577334.3933676685 613454.6619697869 594741.414364146 547307.937605099 1.042003095314075 1.0747773881320923 1.0123616231219903 1.1632502243281648 1.1001812870728445 1.0463275027456327 1.0548620871350025 1.120858331881923 1.0866668898803213 1.0 19.061993254535057 ISTPQTNTVPIKPLIS(ph)TPPVSSQPK ddPTM_KYSE-520_SHP099_60min_R1 2 ISTPQTNTVPIKPLISTPPVSSQPK 25 1 Q9BTA9-2;Q9BTA9;A0A0A0MRT2;Q9BTA9-5 Q9BTA9-2 WAC WW domain-containing adapter protein with coiled-coil 1 ISTPQTNTVPIKPLIS(0.639)T(0.361)PPVSSQPK;ISTPQTNTVPIKPLIS(0.723)T(0.277)PPVSSQPK 125.61 9.2619e-05 941320000.0 379300.0 500520.0 344390.0 281044.0 358050.0 528230.0 294569.0 420660.0 522020.0 398350.0 True False 358259.47288419574 476474.2679041628 366589.9304434826 307754.33726104023 386226.497974175 524933.1206330301 324346.90923639847 419200.82864278177 427234.32705331175 394820.9289116107 0.9073973709342039 1.2068110705722797 0.9284967021734346 0.7794782766694158 0.9782320786258023 1.329547352213813 0.8215038400586171 1.0617492588307775 1.0820964537798288 1.0 18.590838941527743 -6.026002690017516 24.990166415747968 1.0597623856494818 0.9599729658892349 0.09692782698563462 0.15194989136468745 1998.2837308760631 1920468.80360351 0.05106327071100975 0.05124432097573096 9.418837624821809e-07 6.026002690017516 -0.09978941976024691 ISVPPS(ph)PTYPPAGPPAFPAGDSKPELPLTVAIRPFLADK ddPTM_KYSE-520_SHP099_60min_R1 2 ISVPPSPTYPPAGPPAFPAGDSKPELPLTVAIRPFLADK 39 2 H0YJL1;A0A3B3ISJ2;Q96KQ4 H0YJL1 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 ISVPPS(0.995)PT(0.005)YPPAGPPAFPAGDSKPELPLTVAIRPFLADK;ISVPPS(0.802)PT(0.198)YPPAGPPAFPAGDSKPELPLTVAIRPFLADK 142.27 4.6793e-07 155777000.0 77758.0 106736.0 87085.0 77110.0 76160.0 125780.0 85511.0 126085.0 150746.0 100445.0 True False 73444.60873326991 101608.24234599776 92698.63844092663 84438.51121603316 82153.35870887642 124994.9603642779 94155.286386937 125647.64056346011 123374.32639741487 99555.13544502751 0.7377279776172335 1.0206228125931678 0.9311286457152488 0.8481582676632341 0.8252046299935976 1.2555350339842366 0.9457602158446944 1.2620910011502158 1.2392562758908592 1.0 16.60320811729313 -6.25426908383789 24.993727356019086 1.1447361763007946 0.8826909224548092 0.5567987409884338 0.11933375964114959 438.84788322550355 1529707.728568634 0.03918517999919496 0.03839230824303651 5.568406300132481e-07 6.25426908383789 -0.2620452538459854 ISVS(ph)SPGR ddPTM_KYSE-520_SHP099_60min_R1 2 ISVSSPGR 8 0 O75864-2;O75864 O75864-2 PPP1R37 Protein phosphatase 1 regulatory subunit 37 1 IS(0.015)VS(0.743)S(0.242)PGR;IS(0.032)VS(0.634)S(0.334)PGR 93.70100000000001 0.0037938000000000004 405650000.0 1539250.0 1380240.0 1241880.0 1066210.0 1139430.0 1267530.0 1104490.0 1192590.0 1509330.0 1238320.0 True False 1453864.7340811982 1313931.1986175224 1321933.571878254 1167542.277832274 1229096.6585301333 1259618.8751036206 1216142.6279836285 1188453.1836425993 1235273.7191130144 1227349.4481983818 1.1845564734764957 1.0705436830123918 1.0770637277090982 0.9512712777490565 1.0014235638711666 1.0262919635093386 0.9908690876659425 0.9683087285264371 1.0064564097260682 1.0 20.227114637726956 -4.19148038101059 0.9860188912188913 0.9924784500107752 1.2996324948349425 0.8261529940125996 0.026864149900152304 0.8575501181074177 0.6126807547696647 0.008914673051795188 0.2892983278048884 6.434571321208255e-05 4.19148038101059 0.3071540448241673 ISVSS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 4 ISVSSPGR 8 0 O75864-2;O75864 O75864-2 PPP1R37 Protein phosphatase 1 regulatory subunit 37 1 IS(0.001)VS(0.01)S(0.989)PGR;ISVS(0.003)S(0.997)PGR;IS(0.001)VS(0.064)S(0.935)PGR;IS(0.001)VS(0.015)S(0.984)PGR 168.9 0.00014327 2258730000.0 6505090.0 5893710.0 5354240.0 4606940.0 4608250.0 5105800.0 4614550.0 4879950.0 5872020.0 5010060.0 True False 6144239.6901245825 5610567.324960929 5699382.8774869 5044782.19247298 4970893.057644171 5073932.808299658 5081033.747668018 4863022.592438891 4805809.1895781625 4965674.766167699 1.2373423511315564 1.1298700759032858 1.1477559739349275 1.015930851300262 1.001050872584734 1.0218012752002097 1.0232312801245635 0.9793276485950707 0.9678058704773139 1.0 22.243558342598384 -4.658710192742383 0.7430108854977435 0.990315682682825 1.2984683045592238 0.9044078778536379 0.025921983471260686 0.5050251371823651 0.3079018568401714 0.01150599547373781 0.11875515428450112 2.194268695291755e-05 4.658710192742383 0.3081526218763988 ISYIPDEEVS(ph)SPS(ph)PPQR ddPTM_KYSE-520_SHP099_60min_R1 1 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-1;Q9Y6M1;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 2 ISYIPDEEVS(0.585)S(0.415)PS(0.999)PPQR 168.41 1.2854e-07 137220000.0 375850.0 358790.0 332910.0 309690.0 365110.0 348800.0 363820.0 371770.0 431430.0 369680.0 True False 355000.85126160004 341553.1898452306 354369.91127483314 339122.8444883059 393842.0798082707 346623.0098192097 400598.4761410277 370480.41664177016 353093.1874652514 366404.9228066879 0.9688757687595138 0.93217412918175 0.9671537941148124 0.9255411796615632 1.0748820643331214 0.9460107881849749 1.0933217629075906 1.0111229232507677 0.9636693327167452 1.0 18.48307936122616 -5.740727937348428 24.99991903416781 1.0158738235655087 0.9486116018924813 0.3585480868516294 0.04349454639474755 261.1170695166752 315182.0090136448 0.012283527436854604 0.015840611738631476 1.8166533441619684e-06 5.740727937348428 -0.06726222167302742 ISYIPDEEVS(ph)SPSPPQR ddPTM_KYSE-520_SHP099_60min_R1 1 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-1;Q9Y6M1;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.499)S(0.499)PS(0.001)PPQR 132.08 2.836e-05 2746900000.0 1698100.0 1770500.0 1203500.0 1009800.0 1269600.0 1800000.0 1269400.0 1750900.0 2085300.0 1934300.0 True False 1603903.0079215742 1685442.52242532 1281079.535668085 1105771.0883925587 1369510.2969641464 1788765.5323239022 1397723.3401501302 1744826.53656313 1706662.086135151 1917163.6068626274 0.8366020522089435 0.879133380370958 0.6682160724741316 0.57677450397784 0.7143419017875595 0.9330270645243239 0.7290579349341273 0.9101083133006468 0.8902015874002768 1.0 20.870542028259145 -7.509833198245778 0.8110025702299342 0.9912938997590485 0.7448243246827565 0.39810223291735436 0.09912161704980334 0.668873963971847 0.8675227839004103 0.10160889765443162 0.04154944593899082 3.091482566410888e-08 7.509833198245778 -0.24646957507629197 ISYIPDEEVSS(ph)PS(ph)PPQR ddPTM_KYSE-520_SHP099_60min_R1 7 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-1;Q9Y6M1;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 2 ISYIPDEEVS(0.006)S(0.994)PS(1)PPQR;ISYIPDEEVS(0.012)S(0.988)PS(1)PPQR;ISYIPDEEVS(0.426)S(0.574)PS(1)PPQR;ISYIPDEEVS(0.008)S(0.992)PS(1)PPQR;ISYIPDEEVS(0.022)S(0.978)PS(1)PPQR;ISYIPDEEVSS(1)PS(1)PPQR;ISYIPDEEVS(0.004)S(0.996)PS(1)PPQR 254.59 3.9792000000000005e-24 2862450000.0 2254933.0 2077305.0 1922351.0 1947679.0 1928678.0 1981143.0 1946084.0 2157983.0 2440843.0 1915165.0 True False 2129847.3713925085 1977508.1497016274 2046268.821330353 2132785.8265689583 2080453.9859232984 1968777.9516693186 2142813.1626695506 2150497.460650018 1997647.4398448102 1898198.1280758253 1.122036388030528 1.041781740511038 1.0780059210176467 1.1235844114602151 1.096015192066501 1.037182537770722 1.128866966506646 1.1329151729961637 1.0523914286385874 1.0 20.856199153608628 -8.009490683520484 11.793692095455386 1.0000000490969414 1.0928790403058721 0.45614458235987854 0.032611480538831075 0.44350507927079574 548.5814772999751 0.032099299769030684 0.008289699757744873 9.783839428389552e-09 8.009490683520484 0.09287899120893073 ISYIPDEEVSS(ph)PSPPQR ddPTM_KYSE-520_SHP099_60min_R1 9 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-1;Q9Y6M1;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.048)S(0.952)PSPPQR;ISYIPDEEVS(0.002)S(0.998)PSPPQR;ISYIPDEEVS(0.008)S(0.989)PS(0.003)PPQR;ISYIPDEEVS(0.002)S(0.998)PSPPQR;ISYIPDEEVS(0.019)S(0.981)PSPPQR;ISYIPDEEVSS(1)PSPPQR;ISYIPDEEVS(0.001)S(0.999)PSPPQR;ISYIPDEEVS(0.093)S(0.907)PSPPQR;ISYIPDEEVS(0.198)S(0.801)PSPPQR 359.98 7.583499999999999e-72 11631680000.0 6466920.0 7030650.0 4978330.0 4365180.0 4738880.0 6728240.0 4978610.0 6610850.0 7471870.0 7054370.0 True False 6108187.056114594 6692887.020779203 5299241.117409628 4780045.394760777 5111802.895461132 6686246.558446091 5481896.485351228 6587918.504333991 6115166.758514674 6991873.770016814 0.8736123186760429 0.9572379652333323 0.7579143004746901 0.6836572787196189 0.7311062904742399 0.9562882252134841 0.7840382514997901 0.94222503452292 0.8746105778880457 1.0 22.73724770825098 -7.269577548797924 24.324494392014856 0.9313133689607488 0.819914151974789 0.26785364528348 0.08942883895974904 694.6774128280236 2076330.258417741 0.05161648060600495 0.025483745433740615 5.375544373768758e-08 7.269577548797924 -0.11139921698595978 ISYIPDEEVSSPS(ph)PPQR ddPTM_KYSE-520_SHP099_60min_R1 1 ISYIPDEEVSSPSPPQR 17 0 F8W930;Q9Y6M1-1;Q9Y6M1;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 ISYIPDEEVS(0.026)S(0.116)PS(0.858)PPQR 75.376 0.012546 1822100000.0 285690.0 244040.0 247940.0 233580.0 223290.0 267840.0 235130.0 251870.0 277700.0 260470.0 True False 269842.2061911044 232315.95208849214 263922.6091180265 255779.372971612 240861.65265369 266168.3112097964 258899.2350476605 250996.32175689997 227276.68024731753 258162.43844259388 1.0452419330208165 0.8998828547250143 1.02231219502799 0.9907691239463103 0.9329848838844503 1.0310109898848927 1.0028540038958087 0.9722418306515671 0.8803630830976047 1.0 17.977919584243004 -7.53913182903397 24.905404515821715 0.9355551528193732 0.9866865710260795 0.1307956968226771 0.04955671699061662 433.3678389180537 664057.0469793326 0.03129369886039615 0.011834688257018033 2.889802556677814e-08 7.53913182903397 0.0511314182067063 ISYT(ph)PPES(ph)PVPSYASSTPLHVPVPR ddPTM_KYSE-520_SHP099_60min_R1 2 ISYTPPESPVPSYASSTPLHVPVPR 25 0 P41212 P41212 ETV6 Transcription factor ETV6 2 IS(0.03)Y(0.026)T(0.945)PPES(0.997)PVPS(0.003)YASSTPLHVPVPR;IS(0.009)Y(0.003)T(0.988)PPES(0.998)PVPS(0.002)YASSTPLHVPVPR 166.03 4.072e-10 1145730000.0 438710.0 648300.0 617330.0 1081740.0 426660.0 490280.0 402140.0 402460.0 545020.0 461850.0 True False 414373.8817532969 617154.6948818609 657124.079562924 1184548.2443630097 460235.7146366756 487219.98065986775 442792.2357081882 401063.96019487036 446058.1068361287 457758.368313863 0.9052240449030536 1.348210622899432 1.4355260876680804 2.5877151055179 1.0054119083217152 1.064360619893254 0.9673056056609035 0.8761477407221969 0.9744400926610434 1.0 18.804226734712962 -5.948830815643014 24.99998848962504 0.975545219951373 1.5754310821311093 0.3467721546511173 0.39541549711789997 122.92247067673311 60056.17281222153 0.12750058559795982 0.1445720543574463 1.1250431619757214e-06 5.948830815643014 0.5998858621797363 IT(ph)FITSFGGSDEEAAAAAAAAAASGVTTGKPPAPPQPGGPAPGR ddPTM_KYSE-520_SHP099_60min_R1 2 ITFITSFGGSDEEAAAAAAAAAASGVTTGKPPAPPQPGGPAPGR 44 1 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-4;Q8N2M8-3 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 1 IT(0.25)FIT(0.25)S(0.25)FGGS(0.25)DEEAAAAAAAAAASGVTTGKPPAPPQPGGPAPGR;IT(0.25)FIT(0.25)S(0.25)FGGS(0.25)DEEAAAAAAAAAASGVTTGKPPAPPQPGGPAPGR 110.68 3.2339e-05 276450000.0 175465.0 183376.0 179695.0 139248.0 141687.0 175821.0 118510.0 189586.0 201963.0 153272.0 True False 165731.60666919436 174566.34170701235 191278.4272221656 152482.0880535622 152836.96081124706 174723.6359215115 130490.14734614141 188928.37041570497 165291.61027291688 151914.12932381177 1.0909558406903022 1.1491119521536828 1.259122032121496 1.0037386827168644 1.0060746916138936 1.1501473674583638 0.8589730785870209 1.2436523926816292 1.0880594912971553 1.0 17.212896533594826 -5.276052472719433 24.894651113735613 1.0546160280301877 1.1646681521237527 0.20923482446807973 0.10333457092269509 1229.951812865088 2095324.4268073163 0.028819274685332515 0.04297110619462088 5.295994522834224e-06 5.276052472719433 0.11005212409356502 IT(ph)HQEMIKGIK ddPTM_KYSE-520_SHP099_60min_R1 1 ITHQEMIKGIK 11 1 S4R3D6;Q96GX9-3;Q96GX9 S4R3D6 APIP Methylthioribulose-1-phosphate dehydratase 1 IT(1)HQEMIKGIK 60.434 0.04092 568900000.0 327090.0 688510.0 1418600.0 36952.0 98925.0 650610.0 152980.0 66935.0 102610.0 807820.0 True False 308945.66566225083 655432.9461254203 1510045.2258402542 40463.906969976095 106709.83469374468 646549.3016584747 168444.7113409223 66702.81810774641 83978.61058760273 800663.3432744496 0.3858621332641066 0.818612406364097 1.8859927065783557 0.05053797867714542 0.1332767830450893 0.8075170508172647 0.21038144528015842 0.08330944418530994 0.10488629371260816 1.0 19.61083623132256 -5.309804047486634 24.99996226526662 0.30850875521168836 1.0090053008363111 0.317732821191149 0.460423271350215 437.34212844916743 226063.62483378153 0.12965022353320646 0.1923027853461627 4.899998561289269e-06 5.309804047486634 0.7004965456246228 IT(ph)NDCPEHLES(ph)IDVMCQVLT(ph)DLIDEEVK ddPTM_KYSE-520_SHP099_60min_R1 4 ITNDCPEHLESIDVMCQVLTDLIDEEVK 28 0 Q5VWZ2-2;Q5VWZ2 Q5VWZ2-2 LYPLAL1 Lysophospholipase-like protein 1 3 IT(1)NDCPEHLES(1)IDVMCQVLT(1)DLIDEEVK;IT(1)NDCPEHLES(1)IDVMCQVLT(1)DLIDEEVK;IT(1)NDCPEHLES(1)IDVMCQVLT(1)DLIDEEVK;IT(1)NDCPEHLES(1)IDVMCQVLT(1)DLIDEEVK 47.191 0.060834000000000006 3020150000.0 217166.0 302384.0 217433.0 392314.0 223574.0 220615.0 217554.0 250167.0 296990.0 211529.0 True False 205119.36907031198 287857.0187523627 231449.07908510065 429599.4046064951 241168.00183795093 219238.05995202085 239546.48144243052 249299.22906641703 243064.1025086458 209655.0176270715 0.9783661340038738 1.373003241278941 1.1039520146224013 2.0490776203155536 1.1503087527670521 1.045708623783073 1.1425745214861927 1.1890925954839944 1.15935266066945 1.0 17.677657832734965 -5.96500869692489 24.999982694335827 1.1187690935746717 1.3868459766068852 0.18777596421606335 0.2668764126228406 310.3806562463545 221754.16934721294 0.08292482904419976 0.09402757982741816 1.083905208158101e-06 5.96500869692489 0.26807688303221355 IT(ph)PDGITK ddPTM_KYSE-520_SHP099_60min_R1 3 ITPDGITK 8 0 Q14694;Q14694-3;Q14694-2;H3BQC6 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 IT(1)PDGITK;IT(1)PDGITK;IT(1)PDGITK 115.82 0.004772600000000001 3554100000.0 10764000.0 10468900.0 8804900.0 8118800.0 8485700.0 9161500.0 8535200.0 9328700.0 11179900.0 9046200.0 True False 10166899.462497978 9965958.329860741 9372477.942338102 8890408.310993766 9153476.31297154 9104319.680214116 9398021.311524654 9296340.917034945 9149911.982344218 8966057.705837095 1.1339319683252884 1.1115206545428198 1.045328755383363 0.9915626915055343 1.0209031230093948 1.0154205983179219 1.0481776517461339 1.0368370606161532 1.0205055870193016 1.0 23.096042353974553 -4.776220758406558 2.993815937256886 1.0214520045040163 1.1295538458026608 0.8739084291033667 0.015591902553453335 0.0829903185084396 1.4954751325766023 0.004416332452301153 0.012726297215867276 1.6740916937641432e-05 4.776220758406558 0.10810184129864453 IT(ph)PEFSK ddPTM_KYSE-520_SHP099_60min_R1 1 ITPEFSK 7 0 Q5TDE7;Q5TDE8;Q5VTB9-3;Q5VTB9 Q5TDE7 RNF220 E3 ubiquitin-protein ligase RNF220 1 IT(1)PEFSK 87.806 0.037768 136760000.0 850390.0 754460.0 572890.0 658070.0 674110.0 753870.0 641830.0 720420.0 779620.0 706580.0 True False 803217.1714895626 718214.6091324528 609819.40605641 720612.7749440396 727158.6218387688 749164.8176961218 706712.4400571594 717921.0311672912 638060.660620863 700320.2509109209 1.1469283809011686 1.0255516789615269 0.8707722006656319 1.0289760634605722 1.0383229970758932 1.0697460436445578 1.009127522926724 1.0251324736554122 0.911098400754404 1.0 19.417655280415655 -4.294537040359564 4.465608329632439 0.9982821718251755 1.153226027843821 0.38721025092741546 0.0570715172658635 0.19318604742228265 8.801115753150272 0.014822445542854033 0.08592054510509098 5.075314505463152e-05 4.294537040359564 0.15494385601864558 IT(ph)PPAAKPGS(ph)PQAK ddPTM_KYSE-520_SHP099_60min_R1 5 ITPPAAKPGSPQAK 14 1 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3;A0A0A0MSW3;A0A494BZU9 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 2 IT(1)PPAAKPGS(1)PQAK;IT(1)PPAAKPGS(1)PQAK;IT(1)PPAAKPGS(1)PQAK;IT(1)PPAAKPGS(1)PQAK;IT(1)PPAAKPGS(1)PQAK 114.63 0.00023886 9038330000.0 5688740.0 5335460.0 4901590.0 4842990.0 4856160.0 5038720.0 4704200.0 5070090.0 5955450.0 4883450.0 True False 5373174.251977959 5079136.492911261 5217554.334221285 5303266.313501956 5238312.164229218 5007271.479461722 5179746.44456771 5052503.041157908 4874090.404677312 4840186.432266608 1.1101172087418456 1.0493679456336054 1.0779655716232317 1.0956739761403143 1.0822542142816123 1.0345203742734492 1.0701543250560475 1.0438653782994625 1.0070046831635837 1.0 22.206631187015468 -7.429032130726528 0.7019408841986442 0.9966297414409505 1.0813585594140869 0.6903019857375708 0.01931965047689246 0.3956569520953681 0.3953298368280516 0.018372689575748013 0.008496639185668233 3.723641563455352e-08 7.429032130726528 0.08472881797313636 IT(ph)PVTVK ddPTM_KYSE-520_SHP099_60min_R1 7 ITPVTVK 7 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2;S4R349;S4R3C2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 IT(1)PVTVK;IT(0.986)PVT(0.014)VK;IT(1)PVTVK;IT(1)PVTVK;IT(1)PVTVK;IT(1)PVTVK;IT(1)PVTVK 160.74 0.0046806999999999994 25090690000.0 60428300.0 57695600.0 52277800.0 43817700.0 46808800.0 49244200.0 47477600.0 51999600.0 60801600.0 51456100.0 True False 57076221.73817046 54923816.773138836 55647710.635437414 47982121.033728085 50492386.25435998 48936848.68159144 52277099.14472343 51819225.524397925 49761562.123605765 51000238.986240044 1.1191363584309817 1.0769325372760974 1.091126468063243 0.9408214939281706 0.9900421499590015 0.9595415561639759 1.025036356375269 1.01605848432159 0.9757123321918457 1.0 25.604000671755582 -5.243214888774934 24.41025975703186 0.9880131550568403 1.0938518893874845 0.7949865003551707 0.02535163083933753 274.83661162674053 368120.9865279765 0.0070623930864079296 0.012197516160706332 5.711959391647935e-06 5.243214888774934 0.10583873433064417 IT(ph)SEAEDLVANFFPK ddPTM_KYSE-520_SHP099_60min_R1 2 ITSEAEDLVANFFPK 15 0 K9J957;P61289;P61289-3;P61289-2;A0A087WTV2;K7ENH2;B7Z8D3 K9J957 PSME3 Proteasome activator complex subunit 3 1 IT(0.5)S(0.5)EAEDLVANFFPK;IT(0.5)S(0.5)EAEDLVANFFPK 96.59100000000001 0.007608800000000001 8304600000.0 899590.0 812340.0 839850.0 767700.0 839370.0 945430.0 787130.0 778890.0 1126810.0 885440.0 True False 849687.9494117957 773313.9670528015 893988.0748075115 840661.9771825781 905423.643637993 939529.2206805474 866700.7820485053 776188.2123842924 922209.7085685269 877595.6904618971 0.9681997742771357 0.8811733870819148 1.0186787429835564 0.9579148875949015 1.0317093092850644 1.0705718258325236 0.9875855037441472 0.8844485231869909 1.0508366421935693 1.0 19.743196915669582 -4.772550604293537 24.993967040803025 0.997766659367457 0.9246865719183027 0.2446699835971171 0.05294435523555551 276.43159190455003 621817.9683009067 0.014169684052381493 0.02993629440332709 1.6882991262428384e-05 4.772550604293537 -0.07308008744915429 IT(ph)SPLMEPSSIEK ddPTM_KYSE-520_SHP099_60min_R1 1 ITSPLMEPSSIEK 13 0 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 IT(0.5)S(0.5)PLMEPSSIEK 107.65 0.0019538 1539600000.0 2620500.0 2970300.0 2141400.0 1828700.0 1941900.0 3215300.0 2309200.0 2524500.0 3117300.0 3178200.0 True False 2475135.641162758 2827602.329488803 2279438.0703611444 2002499.0981812945 2094716.4821004104 3195232.12004502 2542636.4716201997 2515743.0987227266 2551276.9007380744 3150043.620602182 0.7857464655329426 0.8976391028351096 0.7236211128801425 0.6357051962977212 0.6649801508780285 1.0143453567269012 0.807175003860465 0.7986375433879869 0.8099179592472934 1.0 21.58694037596553 -6.240463511013622 24.96881489073128 0.8685025351288478 0.7433356455540828 0.3492229217835161 0.09713746176320383 1152.7329330221994 1372166.8480196134 0.03428080665132705 0.034247306936277984 5.748261131296274e-07 6.240463511013622 -0.12516688957476496 IT(ph)SPNIR ddPTM_KYSE-520_SHP099_60min_R1 1 ITSPNIR 7 0 Q9UGU0;Q9UGU0-2 Q9UGU0 TCF20 Transcription factor 20 1 IT(0.745)S(0.255)PNIR 119.62 0.012062999999999999 299530000.0 451570.0 435340.0 404460.0 347330.0 407340.0 424220.0 354740.0 406250.0 501890.0 437550.0 True False 426520.5119175224 414425.6129413382 430532.1387588805 380340.13877142756 439395.34055243817 421572.2856235811 390600.5811287678 404840.8135694624 410759.4276173079 433673.6474087494 0.9835057178734106 0.9556163152120946 0.9927560536162624 0.8770192540958028 1.0131935458330856 0.9720956948676145 0.9006786173489024 0.9335149045565334 0.9471625266410432 1.0 18.726250253566324 ITAHSS(ph)PPLTK ddPTM_KYSE-520_SHP099_60min_R1 5 ITAHSSPPLTK 11 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 ITAHS(0.367)S(0.633)PPLTK;ITAHS(0.197)S(0.803)PPLTK;IT(0.001)AHS(0.445)S(0.554)PPLTK;ITAHS(0.001)S(0.999)PPLTK;ITAHS(0.328)S(0.672)PPLTK 140.31 6.304100000000001e-05 8413650000.0 6185210.0 5622860.0 4956410.0 4528710.0 4578280.0 5186760.0 4650780.0 5013950.0 6026370.0 5305600.0 True False 5842104.071389549 5352729.365515067 5275908.119136399 4959117.236793696 4938564.589150142 5154387.506909073 5120926.229638744 4996557.777714725 4932133.120425016 5258596.511694341 1.1109626035003017 1.0179007561449882 1.0032920585185723 0.9430495809605002 0.9391411906518221 0.9801831145337883 0.9738199571407621 0.9501694542646729 0.9379181516316533 1.0 22.32624637344274 -4.1791947692643046 1.1670777541448525 0.9595442817564618 1.20085427064737 0.826905728002272 0.020779581338567932 0.7148119146104921 0.7272367493219625 0.0064149727615247345 0.21995683857156045 6.619195841942588e-05 4.1791947692643046 0.24130998889090816 ITDFGHS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 ITDFGHSK 8 0 O96017-13;O96017-4;O96017;O96017-9;H0Y820 O96017-13 CHEK2 Serine/threonine-protein kinase Chk2 1 IT(0.004)DFGHS(0.996)K 57.59 0.044706 2286300000.0 314190.0 285710.0 276650.0 292290.0 325350.0 295130.0 296970.0 321690.0 345770.0 306160.0 True False 296761.25437776267 271984.0627405467 294483.3016556508 320069.1537198067 350953.1940117248 293287.9841970849 326990.6257479001 320574.1324730104 282986.88415237714 303447.6605888757 0.9779652075809803 0.8963129332179718 0.9704583027075294 1.054775486153609 1.1565526434794686 0.9665191803684539 1.0775849288583623 1.0564396240554261 0.9325723045720898 1.0 18.21108817272812 -5.106820189337042 4.2188460011760816 1.0408928101893236 0.9362516005709542 0.3004444987437591 0.06128854956163821 0.2531010938075753 7.612381555485183 0.016757916343264408 0.030895968100806154 7.819514884445226e-06 5.106820189337042 -0.10464120961836931 ITEAEKNER ddPTM_KYSE-520_SHP099_60min_R1 1 ITEAEKNER 9 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 83.0 0.008107399999999999 714200000.0 221550.0 221090.0 145030.0 125160.0 203620.0 187810.0 135280.0 161490.0 190790.0 163030.0 False True 209260.1798510243 210468.50453714447 154378.86585620447 137055.1687692738 219643.73556068007 186637.80812541794 148955.4226055695 160929.82888204945 156147.34542450748 161585.68103542062 1.295041605853387 1.3025195251738204 0.9553994194718506 0.8481888239789663 1.3593019762223408 1.155039276558829 0.9218355342570083 0.9959411493074847 0.966343950923962 1.0 17.301939833328095 -4.751656616914336 24.7250438630202 1.0316591842382383 1.2987807653417758 0.3978437907359954 0.13441828760923122 190.7442615178593 482077.4962238757 0.03670975652343191 0.09450304247318705 1.7715090816417126e-05 4.751656616914336 0.26712158110353745 ITEFCHR ddPTM_KYSE-520_SHP099_60min_R1 4 ITEFCHR 7 0 H7BZ94;P07237;H0Y3Z3;I3L398 H7BZ94 P4HB Protein disulfide-isomerase 0 ;;; 173.88 0.00082143 3191480000.0 4200010.0 3688520.0 2763560.0 2727450.0 4355140.0 3672270.0 2951530.0 3214110.0 3174520.0 3178570.0 False True 3967027.072787634 3511317.962618601 2941703.499452342 2986666.0279622595 4697864.740643067 3649350.0007706103 3249899.4565568906 3202961.002588913 2598107.1911368915 3150410.342690039 1.2592096397830865 1.1145589242893337 0.9337524891886024 0.9480244485904133 1.4911913781465382 1.1583729114012944 1.0315797318586444 1.0166805762369364 0.8246885035675852 1.0 21.58710832200282 -7.172752401399796 2.145776153205688 0.9260282228746398 1.142553827549404 0.2608530082174646 0.15504525074450506 0.5133338554305398 4.5139155496582575 0.10797080757548215 0.04900065173944373 6.718117549648925e-08 7.172752401399796 0.21652560467476423 ITES(ph)SLVEITEHK ddPTM_KYSE-520_SHP099_60min_R1 3 ITESSLVEITEHK 13 0 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 IT(0.054)ES(0.662)S(0.284)LVEITEHK;IT(0.004)ES(0.613)S(0.382)LVEITEHK;IT(0.003)ES(0.765)S(0.233)LVEITEHK 283.1 3.2978e-30 1143350000.0 1402500.0 1258600.0 1108540.0 1050340.0 981880.0 1282570.0 988640.0 1418640.0 1508500.0 1438580.0 True False 1324700.5291855661 1198134.966802884 1179998.2621267121 1150163.9978037642 1059148.3698670107 1274565.0048848162 1088581.3793965855 1413719.0689530661 1234594.426190417 1425835.3003983044 0.9290698082839677 0.8403039021885538 0.8275838463229812 0.8066597856586017 0.7428265870336775 0.8939075954486251 0.7634692303469358 0.9915023625506721 0.8658744988607979 1.0 20.443375913643543 -7.267151108073335 24.999375103026875 0.9465163251328275 0.8277978451524385 0.4559781398814565 0.06162419858621919 444.66695890544236 1946224.5210103113 0.031535908493727 0.015815674860905696 5.405662060491494e-08 7.267151108073335 -0.11871847998038898 ITESS(ph)LVEITEHK ddPTM_KYSE-520_SHP099_60min_R1 4 ITESSLVEITEHK 13 0 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 ITES(0.06)S(0.94)LVEITEHK;IT(0.001)ES(0.183)S(0.816)LVEITEHK;ITES(0.322)S(0.678)LVEITEHK;IT(0.001)ES(0.032)S(0.966)LVEITEHK 264.85 2.4300999999999998e-22 1401750000.0 1339460.0 1221820.0 1071500.0 985020.0 892180.0 1196190.0 1025350.0 1295640.0 1396040.0 1468160.0 True False 1265157.4836526904 1163121.9332107892 1140570.6044606168 1078636.004642939 962389.4901901957 1188724.1345058496 1129002.3844516608 1291145.7272446484 1142554.3273045202 1455153.2446111962 0.8694324727226438 0.7993123318922777 0.7838147691210123 0.7412525166249008 0.6613664187975868 0.8169064934624573 0.7758649397461365 0.8872919275176622 0.7851780089387083 1.0 20.47273966307545 -8.608800942576732 0.6578246165843621 1.004196525741035 0.7750690768303526 0.536562562757442 0.05896033039830406 1.6751083499882464 1.1372385680591075 0.0820804170835086 0.024177355842084976 2.461495563888749e-09 8.608800942576732 -0.22912744891068237 ITFHGEGDQEPGLEPGDIIIVLDQK ddPTM_KYSE-520_SHP099_60min_R1 1 ITFHGEGDQEPGLEPGDIIIVLDQK 25 0 P31689;P31689-2 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 197.28 3.5579e-15 74501000.0 102610.0 56520.0 61382.0 61817.0 81512.0 54913.0 43466.0 50505.0 62127.0 56178.0 False True 96918.01875203625 53804.69436175041 65338.78193467245 67692.06909404132 87926.53066016186 54570.26759805692 47859.9674672803 50329.80994295564 50846.302894220746 55680.30662582266 1.7406157513344032 0.9663146204154988 1.1734630409590905 1.21572730460949 1.579131581495 0.9800640640285027 0.8595492799438796 0.9039068387531896 0.913182882341383 1.0 15.764879535533787 -6.438477134656553 7.999485775195757 0.9122791097987617 1.2984786856345023 0.49135350512176923 0.20437124279258198 0.2854245403460454 24.48904235014068 0.07136167692168571 0.06275743687388333 3.6435343255275455e-07 6.438477134656553 0.3861995758357406 ITGCAS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 4 ITGCASPGK 9 0 P50991-2;P50991 P50991-2 CCT4 T-complex protein 1 subunit delta 1 IT(0.01)GCAS(0.99)PGK;IT(0.001)GCAS(0.999)PGK;ITGCAS(1)PGK;ITGCAS(1)PGK 139.31 0.00085759 5625930000.0 12338300.0 11594600.0 9401400.0 7822100.0 8713300.0 10468800.0 8622800.0 10297100.0 12168600.0 11123000.0 True False 11653869.90320874 11037578.012150576 10007429.286771864 8565510.032199886 9398987.138104677 10403460.335995816 9494476.774418259 10261381.763461202 9959088.98544297 11024458.873563053 1.0570922379832204 1.0011900029505287 0.9077478905354662 0.7769551440515786 0.8525576852251405 0.9436708373001047 0.8612193018549208 0.9307832594004473 0.9033630674903357 1.0 23.394204508240474 -4.682310099869667 3.159805086333619 0.888182041316211 1.0460816426440176 0.4725251493803825 0.05683324376322328 0.2012713472327378 3.893447144802948 0.015245490627297218 0.049020028518196944 2.0782122485280584e-05 4.682310099869667 0.15789960132780656 ITHS(ph)PDSVK ddPTM_KYSE-520_SHP099_60min_R1 7 ITHSPDSVK 9 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 IT(0.001)HS(0.923)PDS(0.076)VK;IT(0.015)HS(0.869)PDS(0.115)VK;IT(0.016)HS(0.962)PDS(0.023)VK;ITHS(0.973)PDS(0.026)VK;ITHS(1)PDSVK;ITHS(1)PDSVK;IT(0.001)HS(0.877)PDS(0.122)VK 222.34 3.962e-09 5286530000.0 8886580.0 8206030.0 7730510.0 9264850.0 7530960.0 7439220.0 7241770.0 7319780.0 9361570.0 7239260.0 True False 8393623.692441963 7811800.001297853 8228831.043853329 10145378.55842127 8123603.706699049 7392789.068541455 7973838.784464331 7294389.391629496 7661744.873975093 7175125.788459055 1.169822514602158 1.088733526297597 1.1468553007236644 1.4139652540642236 1.132189726870794 1.0303358138239895 1.1113169329086856 1.0166218135662892 1.067820286342401 1.0 22.774572693488157 -6.001887459196514 24.99950803637828 1.0538193639895213 1.20249208916307 0.4459151627704955 0.08376056262524782 78.2677389683237 1036684.4033589124 0.02766213961717751 0.03091086412012345 9.95663394935879e-07 6.001887459196514 0.14867272517354868 ITITNDK ddPTM_KYSE-520_SHP099_60min_R1 2 ITITNDK 7 0 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PS65;E9PM13;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066 E9PKE3;A0A0G2JIW1;P17066 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6 0 ; 134.81 0.013899000000000002 1427450000.0 2483600.0 3321900.0 1907020.0 1571350.0 2739400.0 3314900.0 2219000.0 2726900.0 2753700.0 3109100.0 False True 2345829.7570661446 3162310.937726443 2029949.560539884 1720690.6315563964 2954975.1949461116 3294210.4795002816 2443318.175353033 2717441.0203632424 2253697.495127976 3081555.7928431984 0.7612485104161506 1.0262059655290992 0.6587417840216842 0.5583837344605728 0.9589231523274492 1.0690088711523464 0.7928846140081419 0.881840603591991 0.7313505406464185 1.0 21.55522748125806 ITKPGSIDSNNQLFAPGGRLS(ph)WGK ddPTM_KYSE-520_SHP099_60min_R1 2 ITKPGSIDSNNQLFAPGGRLSWGK 24 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 ITKPGS(0.001)IDS(0.001)NNQLFAPGGRLS(0.999)WGK;ITKPGSIDSNNQLFAPGGRLS(1)WGK 194.26 2.4099e-15 4880490000.0 2269700.0 2091580.0 2452530.0 1997020.0 2072150.0 1841270.0 1763850.0 1772850.0 2852530.0 1613130.0 True False 2143795.2164652217 1991097.3572744133 2610624.0079867425 2186816.180374041 2235216.416079282 1829777.9509455713 1942157.1715170995 1766700.3971363006 2334582.458429533 1598838.9231961507 1.3408450253260529 1.245339557592281 1.6328249019407084 1.3677526539086862 1.3980247688810228 1.1444417097926056 1.2147297287675736 1.104989609337623 1.4601736451115401 1.0 20.608593169548516 -6.251808053898484 22.64340975078235 1.1932952145253453 1.4000154846051929 0.3569097616707586 0.14209222238096486 221.81914057904714 521499.4547162131 0.04613723653256669 0.045457691412984474 5.60005053491054e-07 6.251808053898484 0.2067202700798476 ITLDNAYMEK ddPTM_KYSE-520_SHP099_60min_R1 3 ITLDNAYMEK 10 0 P14618;B4DNK4;P14618-3;H3BUW1;H3BTJ2;H3BT25;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;; 164.33 0.00048443 1252640000.0 1143880.0 1531000.0 982550.0 758710.0 1323030.0 1467250.0 1035680.0 1333070.0 1240360.0 1451370.0 False True 1080426.6961317516 1457448.4619221494 1045886.7451355853 830817.570285521 1427144.9339890343 1458092.3485012476 1140376.6416627448 1328445.8913108758 1015141.8909310872 1438511.990948775 0.751072429656393 1.0131639298751238 0.7270615411733672 0.5775534548985947 0.992098045041499 1.0136115358618305 0.7927474006738072 0.9234861437857707 0.7056888627404122 1.0 20.45614581626876 ITLPVDFVTADKFDENAK ddPTM_KYSE-520_SHP099_60min_R1 3 ITLPVDFVTADKFDENAK 18 1 P00558-2;P00558 P00558-2 PGK1 Phosphoglycerate kinase 1 0 ;; 220.64 2.3593e-18 950198000.0 1836629.0 1024875.0 839288.0 744713.0 1269529.0 1044878.0 713741.0 880426.0 944808.0 817828.0 False True 1734747.5281408592 975638.4666312612 893389.8473882802 815490.2996138721 1369433.7096680838 1038356.5288241853 785892.9057208878 877372.0076989728 773254.6838714719 810582.6801805566 2.140124099067162 1.2036260957536602 1.1021575827271295 1.00605443411673 1.689443585647603 1.281000142505996 0.9695407081062117 1.0823966871627937 0.9539491809758753 1.0 19.62859982390919 -4.261762699127665 4.973572723522364 1.1527632761012356 2.1893553307573144 0.6758140664235337 0.20735587782307566 0.10578487967068156 8.14055882786504 0.05500589516820884 0.378643406971054 5.473149370711079e-05 4.261762699127665 1.0365920546560787 ITLQDVVSHSK ddPTM_KYSE-520_SHP099_60min_R1 1 ITLQDVVSHSK 11 0 P46940;A0A0J9YXZ5;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 0 130.1 0.00025574 218290000.0 317200.0 340410.0 220100.0 311300.0 303260.0 298400.0 211390.0 283540.0 263060.0 269050.0 False True 299604.28367747663 324056.19263417326 234287.99817245136 340885.8584042421 327124.8366866318 296537.5749141405 232759.3641675881 282556.46591873374 215294.93520295064 266666.42631773226 1.1235170764260327 1.2152118176588953 0.8785807850190256 1.278323121179408 1.2267192432273553 1.1120169081983229 0.8728484023341431 1.0595877022106583 0.8073567346885556 1.0 18.02467667340176 -6.669281024558254 6.104778161507486 0.9406298452361913 1.1433242534304677 0.4155557411609151 0.11882633299989767 0.21729227210641824 11.7704422124819 0.04555780442578741 0.034928814516016635 2.1415044216648479e-07 6.669281024558254 0.20269440819427642 ITPHTS(ph)PAPR ddPTM_KYSE-520_SHP099_60min_R1 2 ITPHTSPAPR 10 0 A0A0C4DFZ9;Q58A45-2;Q58A45-4;Q58A45-3;Q58A45 A0A0C4DFZ9 PAN3 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 1 ITPHT(0.09)S(0.91)PAPR;ITPHT(0.026)S(0.974)PAPR 72.846 0.013377000000000002 1136770000.0 384700.0 355680.0 430060.0 299180.0 375500.0 406570.0 326000.0 349780.0 504210.0 357370.0 True False 363359.9241195629 338592.5989134359 457782.35572032887 327613.97724825284 405049.71369725646 404032.4458205163 358955.2614533973 348566.6948192657 412658.1740997484 354203.979829653 1.0258493546411118 0.9559254502907475 1.2924257822864942 0.9249302546115149 1.1435493014281113 1.1406773182357446 1.0134139701818972 0.9840846367307944 1.16502975008414 1.0 18.434220896713672 -10.505646478763296 6.978873894578649 0.9999750329466278 1.070372475565789 0.03844704969142543 0.10746581846552235 3.982074621484236e-05 2.8205845492564997e-06 0.0992511225433003 0.024063399432660917 3.121429433512524e-11 10.505646478763296 0.07039744261916125 ITPLSLQTQGSS(ph)HETLNIVEEK ddPTM_KYSE-520_SHP099_60min_R1 6 ITPLSLQTQGSSHETLNIVEEK 22 0 O43491;E9PMV8;Q6R5J7 O43491 EPB41L2 Band 4.1-like protein 2 1 ITPLSLQT(0.001)QGS(0.1)S(0.896)HET(0.002)LNIVEEK;IT(0.008)PLS(0.026)LQT(0.092)QGS(0.032)S(0.837)HET(0.005)LNIVEEK;ITPLSLQTQGS(0.005)S(0.995)HETLNIVEEK;ITPLSLQTQGS(0.374)S(0.626)HETLNIVEEK;ITPLSLQTQGS(0.035)S(0.965)HETLNIVEEK;ITPLSLQTQGS(0.004)S(0.996)HETLNIVEEK 284.06 1.3593e-44 5086751000.0 1492550.0 2850060.0 1988110.0 5072130.0 1446794.0 1674100.0 1596880.0 1702980.0 2559420.0 1584570.0 True False 1409755.2761753404 2713138.839572725 2116266.7516884687 5554183.710208504 1560648.4566682002 1663651.3209241347 1758308.214446936 1697072.7598585216 2094693.8457277294 1570531.942576804 0.897629164970899 1.7275285946245846 1.3474840557628305 3.5364984051808848 0.9937069182481015 1.0592916169502085 1.119562211235286 1.080571947536514 1.3337480053356459 1.0 20.58282185515296 ITPPAAKPGS(ph)PQAK ddPTM_KYSE-520_SHP099_60min_R1 6 ITPPAAKPGSPQAK 14 1 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3;A0A0A0MSW3;A0A494BZU9 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 1 ITPPAAKPGS(1)PQAK;ITPPAAKPGS(1)PQAK;ITPPAAKPGS(1)PQAK;ITPPAAKPGS(1)PQAK;IT(0.001)PPAAKPGS(0.999)PQAK;ITPPAAKPGS(1)PQAK 194.05 2.898e-09 23436560000.0 8875460.0 8704340.0 7249970.0 5857260.0 6505450.0 8518900.0 6842820.0 7951520.0 9540030.0 8800380.0 True False 8383120.541009124 8286170.440919289 7717314.666562152 6413932.229350564 7017391.904052775 8465730.385174492 7534559.025087545 7923938.033018721 7807801.036585589 8722415.479792034 0.961100805210554 0.9499857533863835 0.884768065043624 0.7353389945950487 0.8045239211902445 0.9705717876874558 0.8638156531918827 0.9084568433339121 0.895142068693539 1.0 23.056296282096284 -8.68244301781701 0.7439555472701652 1.0019183631563346 0.8779175460712936 0.20266017473078912 0.06859286338709282 4.5116517870873105 3.503502922865191 0.09713917986909039 0.027080193230948187 2.0775762988418324e-09 8.68244301781701 -0.12400081708504107 ITS(ph)GPFEPDLYK ddPTM_KYSE-520_SHP099_60min_R1 2 ITSGPFEPDLYK 12 0 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 1 IT(0.012)S(0.988)GPFEPDLYK;IT(0.06)S(0.94)GPFEPDLYK 160.69 3.7336e-06 240830000.0 446920.0 413600.0 411280.0 385560.0 430940.0 403340.0 394800.0 388220.0 467170.0 422820.0 True False 422128.45668706775 393730.0351737432 437791.7668712668 422203.50647715904 464852.52628680633 400822.60544862377 434710.23687669117 386873.3554312293 382343.7043973328 419074.1437489821 1.0072882400015477 0.9395235689119023 1.044664228040507 1.007467324755906 1.1092369529847317 0.9564479494318535 1.0373110423559675 0.9231620733512957 0.9123533630038264 1.0 18.676845986514135 -7.265216684369825 24.984281362147055 0.9383182845376826 1.013967613716338 0.2916625862281407 0.049202910234010466 393.6477957003887 2603678.727876527 0.02538682238382072 0.012910846161022211 5.429793529288324e-08 7.265216684369825 0.07564932917865541 ITS(ph)PLMEPSSIEK ddPTM_KYSE-520_SHP099_60min_R1 13 ITSPLMEPSSIEK 13 0 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 IT(0.052)S(0.948)PLMEPSSIEK;IT(0.006)S(0.994)PLMEPSSIEK;IT(0.014)S(0.986)PLMEPSSIEK;IT(0.128)S(0.872)PLMEPSSIEK;IT(0.003)S(0.997)PLMEPSSIEK;IT(0.115)S(0.885)PLMEPSSIEK;IT(0.028)S(0.972)PLMEPSSIEK;IT(0.14)S(0.86)PLMEPSSIEK;IT(0.001)S(0.999)PLMEPSSIEK;IT(0.227)S(0.773)PLMEPSSIEK;IT(0.002)S(0.998)PLMEPSSIEK;IT(0.001)S(0.999)PLMEPSSIEK;IT(0.004)S(0.996)PLMEPSSIEK 250.53 2.82e-16 15907980000.0 12953040.0 14765960.0 10798000.0 9430940.0 10135680.0 14465390.0 10916810.0 13559090.0 15305930.0 14622490.0 True False 12234509.04995493 14056581.117442194 11494056.357410869 10327253.702084485 10933300.351869544 14375106.135346014 12020387.692598362 13512056.681505393 12526758.943096248 14492946.114725092 0.8441699122529994 0.969891215089833 0.79307935504795 0.7125710411350947 0.7543877045648514 0.9918691494161183 0.8293957348247802 0.9323195280341864 0.8643348870502483 1.0 23.788847558835233 -6.255553659917673 24.967982449738308 0.9134670725016505 0.8165466297439647 0.3156548132398411 0.07935691120567644 732.3601408503791 3106768.993773327 0.028375292209316394 0.027656650104626736 5.551960147903895e-07 6.255553659917673 -0.09692044275768574 ITS(ph)PNIR ddPTM_KYSE-520_SHP099_60min_R1 1 ITSPNIR 7 0 Q9UGU0;Q9UGU0-2 Q9UGU0 TCF20 Transcription factor 20 1 IT(0.372)S(0.628)PNIR 98.055 0.005655100000000001 260610000.0 350530.0 340490.0 370160.0 281500.0 322820.0 304620.0 326090.0 333680.0 356330.0 314220.0 True False 331085.40213576925 324132.34931409074 394021.105876941 308253.67536393885 348224.09740545554 302718.75358694815 359054.3595317129 332522.54196149757 291629.4543483135 311436.25525946106 1.063092034226838 1.0407662686672507 1.2651741703889856 0.9897809588903811 1.1181231841981472 0.9720087127773539 1.1528983972420959 1.0677065895377829 0.9364017497107192 1.0 18.248577377230134 -7.678590655730183 6.026679325274628 0.9692616953130061 1.0858273647286363 0.24978490739164427 0.080365384524686 0.2628950708473406 14.576612731345461 0.05488022446240961 0.019757452846593387 2.09608719207223e-08 7.678590655730183 0.11656566941563018 ITVGNDHFCVS(ph)TPER ddPTM_KYSE-520_SHP099_60min_R1 2 ITVGNDHFCVSTPER 15 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 ITVGNDHFCVS(0.772)T(0.228)PER;ITVGNDHFCVS(0.794)T(0.206)PER 97.49 0.0010023999999999999 1089790000.0 934030.0 1015210.0 786380.0 769690.0 787920.0 834300.0 773740.0 775830.0 961150.0 854640.0 True False 882217.4939573568 966437.7877387232 837071.3130524877 842841.1061842634 849924.8213484501 829092.8242321287 851957.1901746993 773138.8268100838 786629.388619768 847068.5544998577 1.0414947990582089 1.1409203925759537 0.9881978366517539 0.9950093197378925 1.0033719429595387 0.9787788955542771 1.0057712397053011 0.9127228518907482 0.928649026623618 1.0 19.692119208143843 -5.065269105342833 0.6826127897159504 0.9570378181421971 1.1106587508077632 0.4982563981901361 0.041873096709158536 1.0678302643363058 0.7368461437886245 0.021696887609888138 0.10990770402571319 8.604604130359538e-06 5.065269105342833 0.1536209326655661 ITVGNDHFCVS(ph)TPERR ddPTM_KYSE-520_SHP099_60min_R1 2 ITVGNDHFCVSTPERR 16 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 ITVGNDHFCVS(0.849)T(0.151)PERR;ITVGNDHFCVS(0.792)T(0.208)PERR 140.32 1.0055e-05 928120000.0 185469.0 224741.0 190991.0 186143.0 198237.0 221883.0 206754.0 211937.0 261031.0 260813.0 True False 175180.66484671467 213944.10501688134 203302.5854564048 203833.9747540663 213837.12408576085 220498.14589368005 227654.7120445882 211201.8400134677 213634.35045602298 258502.39972944325 0.6776751977160145 0.8276290867736701 0.7864630489666158 0.7885186944779056 0.8272152378839404 0.8529829747207777 0.8806676931543336 0.8170208099983528 0.8264308210663399 1.0 17.9798181478656 -13.999999999998682 0.04305487933655395 1.7909775288330405 0.37055534416455094 0.7211136218277847 0.04055884607734297 416.0956320103056 1.331413003533751 41.324458896014086 11.32752508210559 1.0000000000030349e-14 13.999999999998682 -1.4204221846684897 ITVGNDHFCVST(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 2 ITVGNDHFCVSTPER 15 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 ITVGNDHFCVS(0.143)T(0.857)PER;ITVGNDHFCVS(0.155)T(0.845)PER 109.28 0.00031216 1637720000.0 1103410.0 1306320.0 1058880.0 815060.0 1053420.0 1080760.0 826100.0 914420.0 1063140.0 998980.0 True False 1042201.6477066971 1243562.426373704 1127137.0990679034 892523.0573432749 1136318.1608600905 1074014.5759524342 909610.2499590528 911248.0904472331 870100.5755784413 990129.8143946783 1.052590915408252 1.2559589745653335 1.1383730523830202 0.9014202424445972 1.147645636299504 1.0847209732887797 0.9186777700610382 0.9203319374887523 0.8787742404367274 1.0 19.917258161554045 -6.74185210613486 5.859342718740609 0.9220967381851787 1.1002616409356967 0.4628196332860074 0.08821605401863063 0.15452903389365966 16.90490146555254 0.03670478176545546 0.027059377421962464 1.8119570281701284e-07 6.74185210613486 0.178164902750518 ITVNPDSEELFS(ph)DNENNFVFQVANER ddPTM_KYSE-520_SHP099_60min_R1 1 ITVNPDSEELFSDNENNFVFQVANER 26 0 P51587 P51587 BRCA2 Breast cancer type 2 susceptibility protein 1 IT(0.002)VNPDS(0.036)EELFS(0.962)DNENNFVFQVANER 67.778 0.017963 27889000.0 27022.0 29555.0 27120.0 24123.0 25542.0 23888.0 20918.0 24693.0 36054.0 25863.0 True False 25523.03579297847 28135.13343704056 28868.198593534213 26415.642667155596 27552.010085899707 23738.90613119632 23032.595580006644 24607.34574638951 29507.502447377705 25633.873941109538 0.9956761062184474 1.0975763359715873 1.1261738533884933 1.0304974865618077 1.0748281804457975 0.9260756367037359 0.8985218400044024 0.9599542309883266 1.1511136598068368 1.0 14.64576390317665 -6.240730458509205 24.222295560798315 0.9790920104235777 1.0682502102791034 0.22567398937564853 0.07116730031729478 780.4098373194669 912810.2437103625 0.024320496340664837 0.024290096768216113 5.74472893718975e-07 6.240730458509205 0.08915819985552564 ITVQAS(ph)PNLDK ddPTM_KYSE-520_SHP099_60min_R1 4 ITVQASPNLDK 11 0 Q5TCX8;Q5TCX8-2 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 ITVQAS(1)PNLDK;ITVQAS(1)PNLDK;ITVQAS(1)PNLDK;ITVQAS(1)PNLDK 240.73 3.0447e-14 3204900000.0 3711940.0 3990140.0 3006570.0 2574040.0 2836140.0 3554190.0 2722030.0 3447320.0 4153740.0 3407280.0 True False 3506031.288631059 3798447.6850777585 3200378.312882083 2818675.987686658 3059328.0825708043 3532006.981850158 2997199.3568527345 3435362.051530534 3399525.523264288 3377094.1500237295 1.0381799064164154 1.1247680746629667 0.9476722207639947 0.8346453674283413 0.905905475732534 1.0458716354784896 0.8875083796025273 1.017253857582382 1.0066422113936033 1.0 21.68735097013208 -4.77243842521688 24.997235005983566 0.9509886297439449 1.0814739873968189 0.37303720052370926 0.06500080821941365 192.94282409217658 438498.48030602786 0.017652662969399532 0.03730159534029661 1.6887352733900736e-05 4.77243842521688 0.13048535765287395 ITVQAS(ph)PNLDKR ddPTM_KYSE-520_SHP099_60min_R1 2 ITVQASPNLDKR 12 1 Q5TCX8;Q5TCX8-2 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 ITVQAS(1)PNLDKR;ITVQAS(1)PNLDKR 143.28 3.9367e-05 686230000.0 923550.0 786580.0 616400.0 684600.0 748700.0 799280.0 654880.0 670900.0 911870.0 695410.0 True False 872318.8404487182 748791.5161193488 656134.1302748705 749664.1781675045 807618.4304797234 794291.3970421383 721081.6614128853 668572.8044892377 746297.394372062 689249.2084207936 1.2656073155997862 1.086387197795959 0.9519548550200061 1.0876533030558475 1.1717364642755805 1.1524008839444546 1.0461842430911543 0.9700015557813557 1.0827685911776046 1.0 19.394666179787183 IVAHAVEVPAVQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 IVAHAVEVPAVQSPR 15 0 Q96FF9;B5MBX0;H0YCL8 Q96FF9 CDCA5 Sororin 1 IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR;IVAHAVEVPAVQS(1)PR 223.07 2.0593e-14 14863860000.0 3922604.0 3874229.0 3835561.0 3017690.0 3333706.0 3647888.0 3518134.0 3981451.0 4777436.0 4133386.0 True False 3705009.3366027926 3688105.223503709 4082807.399174581 3304490.3502984196 3596049.696007526 3625120.17787665 3873781.318399037 3967640.275758652 3909974.0517609846 4096767.415765648 0.9043738539670944 0.9002476463054069 0.996592431257546 0.806609215251445 0.8777773622609859 0.8848733183939241 0.9455702326403763 0.9684807247025853 0.9544046939824253 1.0 21.966054558884814 -6.920611388431681 3.534742309124998 0.9696341304047583 0.8951725815582727 0.394339776570947 0.04457850497373415 0.2731661144098805 6.764689873514269 0.021215138389539256 0.013444877584288476 1.2005731089203085e-07 6.920611388431681 -0.07446154884648559 IVATKPLY(ph)VALAQR ddPTM_KYSE-520_SHP099_60min_R1 2 IVATKPLYVALAQR 14 1 P11940;P11940-2;E7ERJ7;E7EQV3;A0A087WTT1;H0YAR2;Q9H361;H0YB86 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 1 IVAT(0.002)KPLY(0.998)VALAQR;IVAT(0.003)KPLY(0.997)VALAQR 108.98 0.0010025000000000001 159706000.0 272650.0 314160.0 250730.0 223253.0 247770.0 297210.0 223748.0 275410.0 321350.0 269980.0 True False 257525.5609857003 299067.2820362265 266892.456982184 244470.89799653826 267268.0893815426 295355.00214554806 246366.63141004526 274454.6669911772 263000.9405742728 267588.1872412613 0.9623951028657016 1.1176400764155676 0.9973999963666184 0.9136087079065259 0.9988037668515235 1.1037669681556301 0.9206932262219693 1.025660623589953 0.9828570658731937 1.0 18.029654903627648 -4.961904374582799 24.99978733564585 0.9921577703681743 1.044393259012778 0.087143431532412 0.06094026362004809 354.4656550301223 232610.20316382512 0.015613878538409358 0.03250278543229391 1.0916806824191577e-05 4.961904374582799 0.0522354886446037 IVDDLKDEAEQYR ddPTM_KYSE-520_SHP099_60min_R1 1 IVDDLKDEAEQYR 13 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 0 137.46 1.5079e-05 185620000.0 235950.0 205940.0 118940.0 153330.0 223320.0 187460.0 175440.0 179120.0 147820.0 195720.0 False True 222861.38314533632 196046.3332777579 126607.06271072854 167902.43709965452 240894.01348301317 186289.99260524387 193175.18732939876 178498.67452692206 120979.6142389575 193986.07306785564 1.1488524903918242 1.0106206604284502 0.6526605787129978 0.8655386154495887 1.2418108664880767 0.9603266340675926 0.9958198765218922 0.9201623173457605 0.6236510298171728 1.0 17.565593554492665 -7.537125623526239 24.809647937975384 0.7985191395543867 0.9740653264025338 0.1338158527344514 0.1704373736166006 447.0316688150419 778447.6082352331 0.11817106913551574 0.04470644636754702 2.9031827616644253e-08 7.537125623526239 0.17554618684814716 IVDDLKDEAEQYRK ddPTM_KYSE-520_SHP099_60min_R1 2 IVDDLKDEAEQYRK 14 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 0 ; 185.12 8.0497e-11 351910000.0 1127010.0 991000.0 656550.0 590170.0 1026070.0 976710.0 721070.0 773870.0 829880.0 806240.0 False True 1064492.508661265 943390.8724786747 698872.2635171416 646259.5793589201 1106815.8714603034 970613.9905978211 793962.7925650353 771185.6255926163 679194.7115723579 799097.3408452283 1.3321186972482233 1.180570656737292 0.8745771357190655 0.8087369915101366 1.3850826612557519 1.2146379933778464 0.9935745646772369 0.9650709446447551 0.8499524111217215 1.0 19.60801172802938 -6.94416292126739 5.904102282049276 0.9393723685035388 1.1196598455704507 0.21050536205465686 0.17248437906440575 0.3686156350636935 26.85520265573942 0.08084060972335072 0.05365891026694328 1.1372005962697508e-07 6.94416292126739 0.18028747706691195 IVDNVRPDR ddPTM_KYSE-520_SHP099_60min_R1 1 IVDNVRPDR 9 1 A0A0C4DG89;Q7L014 A0A0C4DG89 DDX46 Probable ATP-dependent RNA helicase DDX46 0 104.42 0.0019647 274330000.0 483150.0 480840.0 395770.0 299420.0 465340.0 467230.0 372040.0 384890.0 404950.0 424520.0 False True 456348.7063643538 457739.7246444461 421281.96745438955 327876.78677609476 501959.61057758087 464313.84425983136 409649.4339604964 383554.90642400103 331421.28795877344 420759.0830715627 1.0845843256264014 1.087890298892475 1.001242716803663 0.7792506447693952 1.192985798222703 1.1035147259812355 0.9735961752032415 0.9115784349182214 0.7876747081474301 1.0 18.68263489028403 -7.14212483762206 3.152923023669114 0.8854390029436522 1.0366369467577994 0.23944406476962599 0.11187497481337996 0.38738579482181607 7.238078149219925 0.06277317640899796 0.03290516976973847 7.209002271692149e-08 7.14212483762206 0.1511979438141472 IVDQIRPDR ddPTM_KYSE-520_SHP099_60min_R1 4 IVDQIRPDR 9 1 P17844-2;P17844;J3KTA4;J3QSF1;J3KRZ1;A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 P17844-2;A0A1X7SBZ2 DDX5;DDX17 Probable ATP-dependent RNA helicase DDX5;Probable ATP-dependent RNA helicase DDX17 0 ;;; 121.8 0.00080272 2205290000.0 3822294.0 3502544.0 2392980.0 2277315.0 3793262.0 3371013.0 2597597.0 3147329.0 3060799.0 3246378.0 False True 3610263.732265819 3334276.5288142697 2547235.3197033764 2493750.332900277 4091770.1386915734 3349973.2574532186 2860187.4548636843 3136411.6502911085 2505035.058063772 3217617.6165638654 1.1220300739530589 1.0362563008263814 0.791652589975437 0.7750300470953364 1.2716769443415799 1.0411346706358158 0.8889146554083436 0.9747620830223208 0.7785372149779969 1.0 21.61756145490521 -6.770122163804104 24.83940441482875 0.9084503154599958 0.9994526264112915 0.09137139211877676 0.14690378680861402 539.0074263442267 1541956.3939740655 0.06506413231314273 0.04464120909142246 1.6977660163479225e-07 6.770122163804104 0.09100231095129574 IVDS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 9 IVDSPEK 7 0 E9PQC4;Q9BZD4 E9PQC4 NUF2 Kinetochore protein Nuf2 1 IVDS(1)PEK;IVDS(1)PEK;IVDS(1)PEK;IVDS(1)PEK;IVDS(1)PEK;IVDS(1)PEK;IVDS(1)PEK;IVDS(1)PEK;IVDS(1)PEK 183.43 0.00012511 14943700000.0 49467130.0 43809360.0 37186790.0 37894860.0 40819860.0 44117510.0 41467390.0 45220680.0 47231830.0 43645920.0 True False 46723089.68862108 41704692.58640996 39583909.98436774 41496376.1008949 44032150.74876727 43842156.2555306 45659318.46392638 45063820.01566602 38655720.28954149 43259251.10481194 1.0800716261919718 0.9640641370643365 0.9150391875361114 0.9592486009606175 1.017866690342898 1.0134746935240824 1.0554810196158821 1.0417152138506012 0.8935827436282554 1.0 25.366505354090116 -5.767160835675916 24.61176095782827 1.008851602909467 0.9738838549690152 0.03348445342452522 0.05636610889406032 327.42629310688375 1408474.5309680684 0.017767584608433817 0.020696655251442177 1.7093821489795162e-06 5.767160835675916 -0.034967747940451765 IVDS(ph)PEKLK ddPTM_KYSE-520_SHP099_60min_R1 13 IVDSPEKLK 9 1 E9PQC4;Q9BZD4 E9PQC4 NUF2 Kinetochore protein Nuf2 1 IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK;IVDS(1)PEKLK 195.25 2.3052e-06 46202920000.0 55444580.0 53177810.0 49178370.0 40374220.0 45029510.0 45865700.0 42334220.0 42444370.0 59375290.0 43264170.0 True False 52368958.621369965 50623068.186079904 52348486.41837414 44211373.72984809 48573076.25413524 45579435.15328244 46613776.09977187 42297140.3870604 48594234.06525662 42880883.11281495 1.221265860677191 1.180550970764667 1.220788440402474 1.0310275936606241 1.1327443076753982 1.0629313541273835 1.0870526144980757 0.986386877242738 1.1332377166162941 1.0 25.353831281979218 -5.256826603109431 24.999999985883804 1.0653856882360637 1.2048366870776475 0.6645332457061489 0.04735748712590196 228.77337032733695 1239886.0702553003 0.012286427770744313 0.02041727639155729 5.535710844969604e-06 5.256826603109431 0.13945099884158374 IVEMS(ph)TSK ddPTM_KYSE-520_SHP099_60min_R1 2 IVEMSTSK 8 0 I3L397;I3L504;P63241;P63241-2;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 I3L397 EIF5A;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 1 IVEMS(0.948)T(0.047)S(0.005)K;IVEMS(0.943)T(0.055)S(0.001)K 107.95 0.0031694 0.0 767720.0 733410.0 784420.0 767080.0 759730.0 803560.0 759740.0 779470.0 971640.0 763450.0 True False 725133.0411881229 698175.8827291458 834984.9683163761 839983.0525689876 819516.4287276083 798544.6839745527 836541.9335478658 776766.2004996649 795214.6690511482 756686.4269551126 0.9583005791527678 0.9226753088972247 1.1034755462395895 1.110080771435347 1.083033076231223 1.0553178377837127 1.1055331558068113 1.026536452656291 1.0509170519300475 1.0 19.529336041490897 -4.7574891922037645 24.99995245381783 1.0708993954711363 0.9404878998755845 0.675460812425486 0.03494935905243086 52.42827661020867 331794.8748738567 0.008960778887796783 0.02193311146756816 1.7478767593116694e-05 4.7574891922037645 -0.13041149559555187 IVEMSTS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 4 IVEMSTSK 8 0 I3L397;I3L504;P63241;P63241-2;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4 I3L397 EIF5A;EIF5A2 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2 1 IVEMST(0.228)S(0.772)K;IVEMST(0.089)S(0.911)K;IVEMS(0.005)T(0.023)S(0.972)K;IVEMST(0.009)S(0.99)K 178.54 5.2011999999999996e-05 1660790000.0 4979370.0 4406480.0 4054120.0 4165260.0 4236430.0 4135210.0 4152120.0 4452650.0 5220710.0 4486220.0 True False 4703154.419971992 4194786.086538673 4315455.062021348 4561125.058068918 4569812.939010575 4109400.6205117367 4571856.810386139 4437204.796406319 4272760.667389171 4446475.581026344 1.057726357486574 0.9433957322150469 0.9705338494235577 1.0257843487394371 1.0277382290168258 0.924192778219013 1.02819789000862 0.9979150263054218 0.9609319987321115 1.0 22.08423083206029 -4.233479715554649 23.323791600263192 0.9878259926287342 1.0577266094179947 0.2755085002049452 0.03458214685632487 5491.732737307358 4580993.404305937 0.008596099519343951 0.6922200079727326 5.841444898946285e-05 4.233479715554649 0.06990061678926052 IVEPEVVGES(ph)DS(ph)EVEGDAWR ddPTM_KYSE-520_SHP099_60min_R1 10 IVEPEVVGESDSEVEGDAWR 20 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 2 IVEPEVVGES(1)DS(1)EVEGDAWR;IVEPEVVGES(1)DS(1)EVEGDAWR;IVEPEVVGES(1)DS(1)EVEGDAWR;IVEPEVVGES(1)DS(1)EVEGDAWR;IVEPEVVGES(1)DS(1)EVEGDAWR;IVEPEVVGES(1)DS(1)EVEGDAWR;IVEPEVVGES(1)DS(1)EVEGDAWR;IVEPEVVGES(1)DS(1)EVEGDAWR;IVEPEVVGES(1)DS(1)EVEGDAWR;IVEPEVVGES(1)DS(1)EVEGDAWR 272.31 1.4674000000000002e-35 8868778000.0 6753220.0 6001910.0 5448920.0 5745960.0 5847400.0 5796340.0 5491910.0 6007430.0 6837530.0 5926640.0 True False 6378605.424389692 5713569.234549426 5800166.101780253 6292054.31081414 6307557.112845115 5760162.892016853 6047085.858676469 5986591.627474708 5596006.912104585 5874134.580456148 1.085880028287396 0.9726657018650986 0.9874077657461245 1.0711457534099498 1.0737849169869225 0.9805977056061177 1.0294428525345245 1.0191444451056189 0.9526521456833962 1.0 22.485944888499453 -6.287172758858004 24.753914027182887 0.9996311733732419 1.0335484408672964 0.21417452361751999 0.03930106974747531 1434.6972814759602 1380084.0243439144 0.014525880995319576 0.012815609546260398 5.162109838396646e-07 6.287172758858004 0.03391726749405444 IVEPEVVGES(ph)DSEVEGDAWR ddPTM_KYSE-520_SHP099_60min_R1 9 IVEPEVVGESDSEVEGDAWR 20 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 IVEPEVVGES(0.991)DS(0.009)EVEGDAWR;IVEPEVVGES(0.989)DS(0.011)EVEGDAWR;IVEPEVVGES(0.981)DS(0.019)EVEGDAWR;IVEPEVVGES(0.994)DS(0.006)EVEGDAWR;IVEPEVVGES(0.913)DS(0.087)EVEGDAWR;IVEPEVVGES(0.989)DS(0.011)EVEGDAWR;IVEPEVVGES(0.999)DS(0.001)EVEGDAWR;IVEPEVVGES(0.765)DS(0.235)EVEGDAWR;IVEPEVVGES(0.999)DS(0.001)EVEGDAWR 280.19 7.532199999999999e-42 4294240000.0 2216622.0 2001609.0 1815010.0 1624560.0 1763646.0 1992321.0 1770371.0 1737728.0 2347582.0 1679581.0 True False 2093661.5589335922 1905448.699163638 1932008.4487186766 1778957.6939582247 1902434.906426932 1979886.185625048 1949337.3778359278 1731700.2271567634 1921320.2865263196 1664701.2190342434 1.2576800779590978 1.1446190327589605 1.1605736973266039 1.0686348238456063 1.1428086221565976 1.189334255893472 1.170983330550339 1.0402468667388787 1.154153228554101 1.0 20.666831834610047 -13.99999999982971 0.09112459704028962 0.5403393987190905 1.259112088213921 0.4711504564568426 0.05245841138558626 202.6918727456787 1.278106598508536 18.111482431753455 1.227479126697371 1.0000000003921082e-14 13.99999999982971 0.7187726894948305 IVFVPGCS(ph)IPLTIVK ddPTM_KYSE-520_SHP099_60min_R1 1 IVFVPGCSIPLTIVK 15 0 P54136-2;P54136 P54136-2 RARS Arginine--tRNA ligase, cytoplasmic 1 IVFVPGCS(1)IPLTIVK 142.45 1.0325999999999999e-05 31247000.0 109200.0 138420.0 117450.0 99051.0 106470.0 142270.0 98943.0 114770.0 137910.0 110980.0 True False 103142.45831519694 131770.09542734423 125021.01492664426 108464.77725923106 114848.5832685672 141382.04015762298 108945.12403062421 114371.88965751923 112869.0204281873 109996.8035411334 0.9376859599072507 1.197944769168394 1.136587708931856 0.9860720836189624 1.044108370163861 1.2853286241609108 0.9904389993467773 1.0397746659497225 1.0261118213856082 1.0 16.747102074710757 IVGELEQMVSEDVPLDHR ddPTM_KYSE-520_SHP099_60min_R1 3 IVGELEQMVSEDVPLDHR 18 0 Q00341;Q00341-2;A0A024R4E5 Q00341 HDLBP Vigilin 0 ;; 142.26 1.0967e-05 55569000.0 79079.0 78085.0 49607.0 54769.0 69065.0 69302.0 50539.5 61233.0 67633.0 54494.0 False True 74692.33022992178 74333.67939202544 52804.746594006356 59974.22929309969 74500.0225739043 68869.4605117283 55648.5258779877 61020.597014889616 55352.55208918561 54011.22555569045 1.3829038215936655 1.3762635198007256 0.9776624405524718 1.1104030444793527 1.379343308866192 1.2750953121905682 1.0303140746289685 1.1297761972087057 1.0248342176963219 1.0 15.720971664055924 -1.0000000049067383 0.12959699076477008 0.9388789589494805 2.2455842192835767 0.3590979839705968 0.12768251107128223 110.00198278214096 0.9674409636899035 0.7635706282801867 26.253288925376395 0.09999999887018175 1.0000000049067383 1.306705260334096 IVGWYHTGPK ddPTM_KYSE-520_SHP099_60min_R1 1 IVGWYHTGPK 10 0 H3BNT7;H3BTM8;P51665 H3BNT7 PSMD7 26S proteasome non-ATPase regulatory subunit 7 0 141.88 0.00038829 534570000.0 486410.0 405460.0 334200.0 279190.0 535230.0 441200.0 326000.0 309790.0 343400.0 310120.0 False True 459427.8676657047 385981.0929921326 355743.0667389059 305724.13365846575 577349.5559578765 438446.3071451693 358955.2614533973 308715.4107955298 281047.2164095385 307372.5780697089 1.4946937379739555 1.2557434219281465 1.1573676122084875 0.9946369828382372 1.8783378777105473 1.4264327348216934 1.1678181043592963 1.0043687460158413 0.9143535775849202 1.0 18.22962893664341 -7.0626301883187965 2.9516607415433813 0.9686025527682068 1.357658182383489 0.3928275565090348 0.22006784404807175 0.3135275134616563 5.347440874743225 0.1245521650776127 0.06816010514932062 8.657047724148005e-08 7.0626301883187965 0.3890556296152822 IVKPNGEKPDEFESGISQALLELEMNSDLK ddPTM_KYSE-520_SHP099_60min_R1 2 IVKPNGEKPDEFESGISQALLELEMNSDLK 30 2 P62081;B5MCP9;A0A2R8Y623 P62081 RPS7 40S ribosomal protein S7 0 ; 150.2 6.2781e-07 551690000.0 694020.0 433940.0 302020.0 432350.0 562460.0 402220.0 368860.0 398370.0 428140.0 307900.0 False True 655521.3271054293 413092.8710427807 321488.6924490862 473440.4140092324 606722.4020403703 399709.59578406694 406147.9685266874 396988.1474502573 350400.5685311006 305172.245542575 2.1480371714012128 1.353638402825035 1.0534663526740502 1.5513875227004614 1.988131001106146 1.3097835783637897 1.3308810825984014 1.3008658331442953 1.1482058858534554 1.0 18.219264233991805 -7.377589024677709 0.8682262622210755 1.0204737437566156 1.5620791378742123 0.3150786911539003 0.2976317071311421 0.8295315772802199 1.1591153167900354 0.28760950801161284 0.11801477435927839 4.191900594078696e-08 7.377589024677709 0.5416053941175967 IVLLDSS(ph)LEYK ddPTM_KYSE-520_SHP099_60min_R1 1 IVLLDSSLEYK 11 0 B4DUR8;P49368;P49368-2;Q5SZX6 B4DUR8 CCT3 T-complex protein 1 subunit gamma 1 IVLLDS(0.316)S(0.682)LEY(0.002)K 105.4 0.00087892 40594000.0 35747.0 24704.0 27140.0 24217.0 30731.0 24466.0 27718.0 25321.0 35607.0 27172.0 True False 33764.04265012219 23517.18275854001 28889.487825535354 26518.576398893452 33149.354864528366 24313.298618798104 30520.005941611253 25233.167360965817 29141.66637942471 26931.27721949611 1.2537111543183588 0.8732293892662258 1.07271139018322 0.984675779865951 1.2308868455941948 0.9027904031672587 1.1332550511015937 0.9369465530843447 1.0820751701418918 1.0 14.716995031020627 IVNHWAS(ph)PELR ddPTM_KYSE-520_SHP099_60min_R1 12 IVNHWASPELR 11 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR;IVNHWAS(1)PELR 187.63 6.2093e-07 12505720000.0 8744870.0 8016090.0 7517320.0 7438240.0 7705380.0 7660090.0 7077770.0 7356800.0 8889260.0 7568530.0 True False 8259774.628633851 7630985.004003599 8001898.475337269 8145168.093211594 8311749.568385011 7612280.53694389 7793260.0639785575 7331280.9778900305 7275194.464008907 7501478.712427247 1.101086191839801 1.0172641017246116 1.066709482502564 1.0858083326581978 1.1080148177472577 1.0147706643935528 1.038896511306222 0.9773114420420522 0.969834714315263 1.0 22.838743581040397 -6.869933321302746 1.5144498482398963 0.980465796074824 1.0706819055200052 0.6385748659950907 0.028665811610287664 0.26617941961662306 1.221167013965407 0.01818826608189451 0.00983744783189216 1.3491700093148728e-07 6.869933321302746 0.09021610944518121 IVPQSQVPNPES(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 7 IVPQSQVPNPESPGK 15 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 IVPQS(0.001)QVPNPES(0.999)PGK;IVPQSQVPNPES(1)PGK;IVPQSQVPNPES(1)PGK;IVPQSQVPNPES(1)PGK;IVPQSQVPNPES(1)PGK;IVPQSQVPNPES(1)PGK;IVPQSQVPNPES(1)PGK 330.65 3.8236e-54 7683198000.0 4755990.0 5584950.0 3854620.0 3447270.0 3473010.0 5127380.0 3730990.0 5037280.0 5352320.0 5115380.0 True False 4492165.753868987 5316640.618819145 4103094.9728100672 3774897.5043404815 3746316.1282761884 5095378.119514957 4108154.880153405 5019806.851389994 4380473.609007282 5070061.712905423 0.8860179635357397 1.0486343007001424 0.8092790985888748 0.7445466580282035 0.7389093743652568 1.0049933133052589 0.8102770957790191 0.9900879191692067 0.8639882228370414 1.0 22.273571877176213 -7.963700977934772 0.7497683883207538 0.9929649539872089 0.8629580667096604 0.12444477712357216 0.10166747592753167 1.5930126329504763 2.0629135440693753 0.10427195346222914 0.04034009079418128 1.0871739110386638e-08 7.963700977934772 -0.1300068872775485 IVPVVSQSECKEEALQMS(ph)SPGR ddPTM_KYSE-520_SHP099_60min_R1 1 IVPVVSQSECKEEALQMSSPGR 22 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 IVPVVSQSECKEEALQMS(0.5)S(0.5)PGR 89.29700000000001 0.0018728999999999998 449560000.0 252640.0 251690.0 216320.0 197850.0 222470.0 242520.0 179810.0 208960.0 285140.0 228070.0 True False 238625.555574646 239598.4346056077 230264.33332423764 216653.60451422838 239977.1233188517 241006.34272177392 197986.9495764889 208235.1665316304 233365.76379445504 226049.477235775 1.055634184571698 1.0599380168249661 1.0186457236707804 0.9584344417140744 1.061613263845551 1.066166335215182 0.8758567018050821 0.9211928692692183 1.0323658636513853 1.0 17.786279055706945 -6.741556054307433 24.99999477818211 0.9507865585733537 1.034542155957438 0.379160777436758 0.04943205020777475 252.22994407892216 317137.4042988141 0.01953125021971636 0.015108297179300045 1.8131926323337167e-07 6.741556054307433 0.08375559738408422 IVPVVSQSECKEEALQMSS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 3 IVPVVSQSECKEEALQMSSPGR 22 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 IVPVVSQSECKEEALQMS(0.209)S(0.791)PGR;IVPVVSQSECKEEALQMS(0.445)S(0.555)PGR;IVPVVSQSECKEEALQMS(0.122)S(0.878)PGR 129.22 2.7654e-05 3438070000.0 1377680.0 1545830.0 1286850.0 1296010.0 1261130.0 1413270.0 1231710.0 1398020.0 1683130.0 1561410.0 True False 1301257.3440630096 1471566.0064618636 1369802.4100327985 1419182.4007403858 1360373.7561518545 1404449.2577041127 1356223.2671311777 1393170.5949203204 1377516.0202544765 1547577.122158598 0.840835216178425 0.9508837946694947 0.8851270740692814 0.9170350093834909 0.8790345480517134 0.9075148744413803 0.8763526209533808 0.9002269256714602 0.8901113880082977 1.0 20.561579876006583 -10.345360606818438 3.3518469545824408 1.0006591272616274 0.8958099765729758 0.5739818771611799 0.027329412514073857 17839666.53928577 28643509.11520927 120289.50607421115 0.006200138140624655 4.5148091150617114e-11 10.345360606818438 -0.10484915068865164 IVQISGNS(ph)MPR ddPTM_KYSE-520_SHP099_60min_R1 5 IVQISGNSMPR 11 0 Q9NWH9;Q9NWH9-3;H7C3F4;H0YKH2 Q9NWH9 SLTM SAFB-like transcription modulator 1 IVQISGNS(1)MPR;IVQISGNS(1)MPR;IVQISGNS(1)MPR;IVQISGNS(1)MPR;IVQIS(0.002)GNS(0.998)MPR 164.65 1.7635e-05 3343650000.0 1637660.0 1534270.0 1361890.0 1166210.0 1198890.0 1459760.0 1400550.0 1502310.0 1569860.0 1410370.0 True False 1546815.735205727 1460561.3662137783 1449679.6085010443 1277046.247766179 1293235.8222490132 1450649.0963695212 1542131.2620507842 1497098.8372517899 1284812.9969501412 1397875.2190512565 1.1065477906215098 1.0448438789873298 1.0370593803679757 0.9135624055435473 0.9251439646571155 1.0377529242946895 1.1031966523431431 1.0709817420383752 0.9191185160447646 1.0 20.414804154007147 -4.491037921735228 2.0178156627453063 1.0019784975790225 1.1108531585282047 0.2279479145228408 0.06148381434937877 0.8207516861071057 5.118771099607256 0.018635274871391518 0.1386220266317558 3.228212228298491e-05 4.491037921735228 0.10887466094918219 IVSGIITPIHEQWEK ddPTM_KYSE-520_SHP099_60min_R1 1 IVSGIITPIHEQWEK 15 0 Q92530;Q5QPM9;Q5QPM7 Q92530;Q5QPM7 PSMF1 Proteasome inhibitor PI31 subunit 0 199.58 3.6827e-11 200630000.0 254720.0 292620.0 220620.0 258370.0 296600.0 294340.0 209520.0 239320.0 227060.0 217200.0 False True 240590.17382826886 278562.0959684253 234841.5182044809 282925.4071182273 319940.73257684807 292502.9148801206 230700.3263181467 238489.85477770795 185831.6277168022 215275.77697904283 1.117590549222314 1.2939778914166613 1.0908868684624133 1.3142463638432027 1.4861901188631845 1.3587358456432181 1.071650185429852 1.1078341377949132 0.8632259064376434 1.0 17.71582646975135 -7.10962358816015 2.067352982334666 0.9693118764883208 1.2773121494284778 0.5348575212315112 0.12149154391950191 0.2843816326304399 2.3411831491928106 0.08143870558873575 0.03875618748663714 7.769201973999559e-08 7.10962358816015 0.30800027294015697 IVSGS(ph)PISTPSPSPLPR ddPTM_KYSE-520_SHP099_60min_R1 2 IVSGSPISTPSPSPLPR 17 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 IVS(0.001)GS(0.631)PIS(0.172)T(0.172)PS(0.022)PS(0.002)PLPR;IVSGS(0.993)PIS(0.004)T(0.004)PSPSPLPR 235.02 3.6876e-23 739640000.0 561910.0 622660.0 504560.0 405560.0 516750.0 604750.0 473760.0 527510.0 601000.0 590990.0 True False 530739.7321601858 592746.4789682863 537084.7449245432 444104.3004639399 557415.2850946937 600975.5309293781 521652.2842520289 525680.1909317593 491873.5499770903 585754.2883832618 0.9060791234240531 1.0119370710956699 0.9169113322361647 0.7581750731859096 0.9516196400938242 1.02598571252142 0.8905650280287993 0.8974414722300834 0.8397267586972494 1.0 19.159936085721753 -10.301703068780103 5.709976156674103 1.0000089409651052 0.9131752636450495 0.1157326704646856 0.0736212553207563 8.783984176926989e-06 1.074189052183152e-06 0.07472333514488746 0.01812120484566726 4.992256961043787e-11 10.301703068780103 -0.08683367732005565 IVSRPEELR ddPTM_KYSE-520_SHP099_60min_R1 2 IVSRPEELR 9 1 B4DUR8;P49368;P49368-2 B4DUR8 CCT3 T-complex protein 1 subunit gamma 0 ; 112.71 0.0039946999999999995 317460000.0 557270.0 597900.0 468600.0 388380.0 699270.0 538910.0 473970.0 538430.0 529040.0 496030.0 False True 526357.1222097961 569175.986533804 498806.70578650915 425291.51842929475 754298.5706979517 535546.4627914854 521883.51310143195 536562.3120005067 432979.67201311106 491635.5601054999 1.0706245945611528 1.1577193204081184 1.0145863038862981 0.8650544284022734 1.5342636536219776 1.0893159613526788 1.061525152878366 1.091382226064701 0.8806923403185036 1.0 18.907229744363125 -7.671262425546366 6.113975929669858 0.9420246101677822 1.1139144176767755 0.15039040517130298 0.1621649192342845 0.38451440841173856 20.550926063074762 0.11620695694850466 0.04203883822986454 2.1317563948416335e-08 7.671262425546366 0.1718898075089933 IVSRPEELREDDVGTGAGLLEIK ddPTM_KYSE-520_SHP099_60min_R1 2 IVSRPEELREDDVGTGAGLLEIK 23 2 B4DUR8;P49368;P49368-2 B4DUR8 CCT3 T-complex protein 1 subunit gamma 0 ; 121.38 9.1973e-05 1770430000.0 879310.0 617530.0 444520.0 489980.0 617890.0 567590.0 545720.0 545170.0 522640.0 491390.0 False True 830532.9214389733 587862.9318685728 473174.47045714734 536547.5518821407 666514.4276868125 564047.4602731793 600886.7033139517 543278.9325136348 427741.75068223994 487036.66689563554 1.705278016812939 1.2070198648812263 0.9715376738945639 1.1016574076487644 1.3685097508882966 1.1581211407929703 1.2337607087039146 1.1154785038598565 0.8782536916751248 1.0 18.893670865136983 -4.278232519382789 3.8564675974893077 1.1217749517159106 1.7531057278867188 0.6494068864001044 0.13138888092418535 0.1502263618654489 4.455751047466087 0.03439604780000603 0.2610397717506572 5.2694766039209205e-05 4.278232519382789 0.6313307761708082 IVVAGNNEDVSFSRPADLDLIQSTPFKPLALKT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 IVVAGNNEDVSFSRPADLDLIQSTPFKPLALKTPPR 36 3 Q9GZY8-5;C9JHF5;A0A0A0MS29;Q9GZY8-4;Q9GZY8-3;Q9GZY8-2;Q9GZY8 Q9GZY8-5 MFF Mitochondrial fission factor 1 IVVAGNNEDVS(0.001)FS(0.001)RPADLDLIQS(0.037)T(0.037)PFKPLALKT(0.924)PPR;IVVAGNNEDVSFSRPADLDLIQS(0.024)T(0.024)PFKPLALKT(0.952)PPR 72.366 0.0088831 1580870000.0 103723.0 164704.0 119321.0 132245.0 135115.0 168518.0 109607.0 133539.0 219782.0 123227.0 True False 97969.27842332577 156791.3726142557 127012.62258035032 144813.52503909095 145747.78180081202 167466.21665342167 120687.14522123469 133075.78437723676 179875.12905335228 122135.30464915533 0.8021372583852913 1.2837514350551877 1.0399337271496192 1.1856811218924852 1.193330480645917 1.371153223340978 0.988142990824147 1.0895767178827527 1.472752940438146 1.0 16.89812076305069 -4.251299878604705 24.32847274924488 1.1793995674239885 0.8021369540205542 0.35877689680940117 0.15173354072481204 1066.9012884945244 2559822.948447078 0.03623729654989404 0.46921850147985084 5.606607083652375e-05 4.251299878604705 -0.37726261340343437 IWAHEALR ddPTM_KYSE-520_SHP099_60min_R1 1 IWAHEALR 8 0 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 179.21 0.0032028 0.0 452610.0 418300.0 264110.0 314670.0 420000.0 391790.0 307340.0 333870.0 319600.0 293220.0 False True 427502.8210443342 398204.2401188993 281134.95319094125 344576.1421910144 453051.61052689207 389344.69328287884 338408.9265493469 332711.88289584353 261568.69646036281 290622.29892170825 1.4709911201944648 1.3701778617688691 0.9673550661254564 1.185649358185832 1.5589017505120666 1.3396931162111747 1.1644286340206538 1.1448257209797723 0.9000296860593884 1.0 18.148785877027457 -7.361387736644426 1.7438259498911344 0.9583185331440197 1.302478480411094 0.43804751790061935 0.15694089136356829 0.409317302704637 2.2373959753044983 0.13860598721266082 0.05032033256467832 4.3512322367639956e-08 7.361387736644426 0.34415994726707433 IWDANGS(ph)RDFLDSLGFSTR ddPTM_KYSE-520_SHP099_60min_R1 2 IWDANGSRDFLDSLGFSTR 19 1 P04818-2;P04818 P04818-2 TYMS Thymidylate synthase 1 IWDANGS(1)RDFLDSLGFSTR;IWDANGS(1)RDFLDSLGFSTR 195.7 3.7678000000000004e-13 1007040000.0 433910.0 446800.0 383180.0 332960.0 424700.0 383200.0 375670.0 388960.0 499660.0 350400.0 True False 409840.14732186025 425335.0573395273 407880.3959096775 364604.4182919256 458121.4737875496 380808.30665917695 413646.3897858826 387610.7885439466 408934.3394035825 347295.72860707465 1.1800898011779104 1.2247056969155679 1.174446911701432 1.0498384755674142 1.3191105909219563 1.09649579678539 1.1910494593323264 1.1160827980769201 1.1774816265196422 1.0 18.40580514154816 -13.999999999902466 0.22431916843322297 0.1123698284660345 1.1898661278554732 0.3592350875484417 0.06913007750879674 168.29642181311476 1.6852287011499496 67.52579976993144 0.12139386480447724 1.0000000002245813e-14 13.999999999902466 1.0774962993894386 IWDLEGK ddPTM_KYSE-520_SHP099_60min_R1 5 IWDLEGK 7 0 P63244;H0Y8W2;J3KPE3;H0YAM7;H0YAF8;D6REE5;D6RAC2;D6RF23;H0Y9P0 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 ;;;; 158.08 0.008226299999999999 3131810000.0 3865390.0 3746220.0 2751800.0 2283410.0 3622450.0 3642790.0 2940760.0 2927920.0 2853090.0 3075640.0 False True 3650969.111236068 3566245.968009143 2929185.431035675 2500424.5998677504 3907516.206078907 3620053.9963856568 3238040.7198518193 2917763.7289016633 2335040.776545983 3048392.222411708 1.1976703930662953 1.1698776626544927 0.9608951923903928 0.8202437276557418 1.2818285578053046 1.1875289438711676 1.062212630004046 0.9571483969321051 0.7659909244548053 1.0 21.539617108941375 -7.348325423396091 3.2042746556345225 0.8792952991859265 1.095921635457861 0.3007235998106088 0.1349832793498785 0.34487044929411265 6.758055454754978 0.0919191760941472 0.03927644127930395 4.4840926420177675e-08 7.348325423396091 0.2166263362719344 IWDMTPVVGCSLATGFS(ph)PH ddPTM_KYSE-520_SHP099_60min_R1 3 IWDMTPVVGCSLATGFSPH 19 0 Q8IWB7 Q8IWB7 WDFY1 WD repeat and FYVE domain-containing protein 1 1 IWDMTPVVGCS(0.004)LAT(0.012)GFS(0.983)PH;IWDMTPVVGCSLATGFS(1)PH;IWDMTPVVGCSLATGFS(1)PH 246.34 2.6701e-26 468350100.0 202592.0 236744.0 227796.0 193886.0 210740.0 241738.0 199994.0 241768.0 288209.0 227143.0 True False 191353.81790286076 225370.46288001147 242480.0946464867 212312.86714604832 227324.03905342164 240229.22347384205 220211.34527334588 240929.36323707542 235877.5107576493 225130.68973457994 0.8499677148791186 1.001065039802944 1.0770637043415139 0.9430649699352704 1.009742560294323 1.0670656397715597 0.9781489388806397 1.070175565673083 1.0477359219026932 1.0 17.78040321230355 -4.275959446963708 4.08746300813127 1.0239603397682229 0.8373786460349162 0.6148357317156952 0.04105968839731669 0.13686659860267114 4.955234843696904 0.010186750548198405 0.07351179339850325 5.297129044872462e-05 4.275959446963708 -0.18658169373330669 IWDPTPSHT(ph)PAGAATPGR ddPTM_KYSE-520_SHP099_60min_R1 1 IWDPTPSHTPAGAATPGR 18 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 IWDPTPSHT(0.953)PAGAAT(0.047)PGR 153.83 2.545e-06 1290000000.0 1823200.0 1964100.0 1621500.0 1776600.0 1518700.0 2275100.0 1783100.0 2109900.0 2061500.0 2161600.0 True False 1722063.4615409046 1869741.687825797 1726024.4844917324 1945447.529845733 1638213.0497790258 2260900.256994503 1963353.1493789973 2102581.249354364 1687183.5661859764 2142449.9056993513 0.8037823694079691 0.8727119746659676 0.8056311981438433 0.9080480830242275 0.764644739380392 1.0552873376315823 0.9164056271075836 0.9813910905272843 0.7875019909206399 1.0 21.030830041272672 -6.248479623533402 24.997028288385604 0.9449721842156731 0.8361581346961885 0.3797766010008553 0.0746561121412778 885.9344516523585 1708808.4546403827 0.023518266444582263 0.023375371818302244 5.643134174902862e-07 6.248479623533402 -0.10881404951948459 IWDPTPSHTPAGAAT(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 IWDPTPSHTPAGAATPGR 18 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 IWDPTPSHT(0.014)PAGAAT(0.986)PGR;IWDPTPSHT(0.001)PAGAAT(0.999)PGR 113.71 0.00012075 1679750000.0 1488200.0 1722250.0 1310750.0 1478550.0 1313010.0 1675780.0 1468020.0 1846840.0 1681110.0 1861630.0 True False 1405646.5793468494 1639510.5248500458 1395243.042274152 1619070.947457735 1416336.4169950355 1665320.83542097 1616421.7880945278 1840433.7430956948 1375862.801334421 1845137.4065262217 0.7618113287254921 0.8885574153182972 0.7561729751611991 0.8774798785885034 0.7676048471975453 0.902545701762241 0.8760441267827912 0.997450778780003 0.7456695617724816 1.0 20.81529682644048 -6.28492119819231 22.749387233225292 0.9024141306334886 0.8153938738148412 0.2624453538008602 0.07854221434263173 368.09750176682184 356613.59717591066 0.025580817048783313 0.02258133367984987 5.188941826306095e-07 6.28492119819231 -0.08702025681864745 IWEGMESSGGS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 6 IWEGMESSGGSPGK 14 0 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 IWEGMESSGGS(1)PGK;IWEGMESSGGS(1)PGK;IWEGMESSGGS(1)PGK;IWEGMESSGGS(1)PGK;IWEGMES(0.005)S(0.033)GGS(0.962)PGK;IWEGMESSGGS(1)PGK 227.74 2.1434e-14 2437650000.0 3682810.0 3257330.0 2671450.0 3112620.0 3129730.0 3251830.0 3315370.0 3537850.0 3301070.0 3388290.0 True False 3478517.1878002756 3100842.977447989 2843655.941471132 3408442.468956672 3376021.9452722133 3231534.12276491 3650519.954493096 3525578.0240903976 2701678.9012027807 3358272.386649732 1.0358055533638537 0.9233446904946984 0.8467615529864777 1.014939253440663 1.0052853242914548 0.9622608742552721 1.0870231875785736 1.0498189599228942 0.8044847439840995 1.0 21.679287820126685 IWGEDLR ddPTM_KYSE-520_SHP099_60min_R1 2 IWGEDLR 7 0 P43490;A0A0C4DFS8 P43490 NAMPT Nicotinamide phosphoribosyltransferase 0 ; 94.40700000000001 0.048954000000000004 488560000.0 1323690.0 1326700.0 969950.0 803510.0 1326310.0 1371920.0 1033360.0 967330.0 1029930.0 1165380.0 False True 1250262.2769894057 1262963.340582702 1032474.5289748721 879875.34881591 1430683.0513283857 1363357.3383921161 1137822.1134217263 963974.5580065183 842920.6744224705 1155055.6398519194 1.0824260181524175 1.093422080294432 0.8938742804694998 0.7617601425059592 1.2386269561107917 1.1803391034624977 0.9850799166415892 0.8345698031742452 0.7297662946613851 1.0 20.139530918285892 -7.182580614532952 4.293804522614304 0.8361588678713905 1.0364712586427043 0.25233400864299205 0.1419804183589428 0.32083880368542955 10.983603354924236 0.0769926165868335 0.04205575795229606 6.567791926104629e-08 7.182580614532952 0.2003123907713138 IWHHTFYNELR ddPTM_KYSE-520_SHP099_60min_R1 7 IWHHTFYNELR 11 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;A5A3E0;P0CG38;P0CG39;Q9BYX7;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;A6NL76 P60709;P63261;P68133 ACTB;POTEE;POTEF;POTEI;POTEJ;POTEKP;ACTG1;ACTA1;ACTC1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1 0 ;;;;;; 245.34 3.6829e-14 41633220000.0 6301420.0 7517370.0 6224110.0 9556190.0 4997790.0 4338950.0 8129650.0 5205510.0 4664930.0 5384770.0 False True 5951867.671030655 7156224.261397595 6625326.089528113 10464407.424426708 5391087.639464743 4311869.003598223 8951474.359738069 5187453.30078517 3817896.305315518 5337065.127087661 1.1151948738310562 1.340853838390879 1.2413800341131367 1.9607044649531837 1.0101221384957244 0.807910134300934 1.6772278671110623 0.9719673972979731 0.7153550152382858 1.0 22.347615185663166 IWIPEEPSQVPAALS(ph)PVW ddPTM_KYSE-520_SHP099_60min_R1 1 IWIPEEPSQVPAALSPVW 18 0 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 IWIPEEPSQVPAALS(1)PVW 94.191 0.0011070000000000001 192020000.0 9285.6 16864.0 11719.0 7219.1 9861.1 12024.0 8934.5 12328.0 15576.0 14845.0 True False 8770.509257615317 16053.828126619928 12474.425491062972 7905.20109349844 10637.112468016036 11948.953755923661 9837.686452317108 12285.237045376836 12747.791039006917 14713.484849235236 0.5960864708452248 1.091096248857344 0.847822634738456 0.5372759189614641 0.7229499045950981 0.8121090196075972 0.6686170239831689 0.8349644677151645 0.8664018870872396 1.0 13.844851365046281 -7.974942700779543 1.723779707084772 0.9968121118617376 0.7635400053625682 0.2145276119297992 0.14469646762464214 0.615266968084823 4.149198753928505 0.1419284849980506 0.040913195369651496 1.0593934884469664e-08 7.974942700779543 -0.2332721064991694 IWS(ph)PLEESR ddPTM_KYSE-520_SHP099_60min_R1 1 IWSPLEESR 9 0 Q58WW2;Q58WW2-2;Q58WW2-4;Q58WW2-3 Q58WW2 DCAF6 DDB1- and CUL4-associated factor 6 1 IWS(1)PLEESR 76.30199999999999 0.015662 66517000.0 102540.0 85547.0 93234.0 86048.0 86363.0 87076.0 82960.0 85245.0 108560.0 90165.0 True False 96851.90179157765 81437.19371133516 99244.01281967445 94225.97604872542 93159.27676174755 86532.52638479773 91346.4064115763 84949.3049913326 88848.24057489667 89366.20824730843 1.0837642515116408 0.9112750256335053 1.1105317632480343 1.0543803737086872 1.0424441026292883 0.9682913495146971 1.0221582430664167 0.9505752415526831 0.9942039873619976 1.0 16.4474417925024 -6.251829888234225 23.88180659261575 0.9861512468034919 1.0379652108112938 0.20923698605581553 0.05180844067813482 641.5413964645503 1594381.7161217688 0.01691979153237923 0.01668664778165429 5.5997689971176e-07 6.251829888234225 0.051813964007801916 IWSTVPT(ph)DEEDEMEESTNRPR ddPTM_KYSE-520_SHP099_60min_R1 1 IWSTVPTDEEDEMEESTNRPR 21 1 Q9GZL7 Q9GZL7 WDR12 Ribosome biogenesis protein WDR12 1 IWSTVPT(1)DEEDEMEESTNRPR 155.11 9.110700000000002e-07 192650000.0 35355.0 30194.0 27246.0 36179.0 30965.0 37475.0 26308.0 27995.0 37632.0 21451.0 True False 33393.78767155481 28743.434917882 29002.320755141365 39617.44128238701 33401.7693332505 37241.10462435458 28967.469381337363 27897.891879082126 30798.97742552054 21260.960828625466 1.5706622076361607 1.3519348984069541 1.3641114806106522 1.8633890350358309 1.5710376216054551 1.751619078955908 1.362472261476347 1.3121651511403374 1.4486164418332976 1.0 14.37591917638885 -8.188747137293745 0.7537059105533077 1.006551593882095 1.5583638541118248 0.4940300352079541 0.16472868888747788 0.8266255056525222 1.0018931330575158 0.17432872626657206 0.06425289139160802 6.475195164171592e-09 8.188747137293745 0.5518122602297297 IWTHPGWS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 2 IWTHPGWSPLK 11 0 O43172-2;O43172 O43172-2 PRPF4 U4/U6 small nuclear ribonucleoprotein Prp4 1 IWTHPGWS(1)PLK;IWTHPGWS(1)PLK 125.29 0.0001249 4160600000.0 3645600.0 3484800.0 3127300.0 3412500.0 3485500.0 3423900.0 3028800.0 2907700.0 3660500.0 2941600.0 True False 3443371.3006765763 3317384.977208561 3328890.7618569196 3736822.97399446 3759789.020217811 3402530.1700687855 3334980.662239415 2897613.867362282 2995845.4736957364 2915539.712530173 1.1810407815328088 1.1378287741893447 1.1417751394536935 1.281691673735275 1.289568790320122 1.1670326956774637 1.1438639123681296 0.9938516203052042 1.027544046414608 1.0 21.475331543150286 -7.096762710463386 2.4017294884903024 1.0046033347070584 1.202410460069507 0.750929018539873 0.04949677902525494 0.17073192005123802 1.9095854367764191 0.03270124287090703 0.016508781678139538 8.00271387336336e-08 7.096762710463386 0.1978071253624485 IY(ph)GISFPDPK ddPTM_KYSE-520_SHP099_60min_R1 2 IYGISFPDPK 10 0 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 1 IY(0.999)GIS(0.001)FPDPK;IY(0.999)GIS(0.001)FPDPK 110.87 0.0033415999999999997 167961000.0 826000.0 781760.0 741170.0 684560.0 777320.0 768250.0 689120.0 742790.0 914700.0 728120.0 True False 780180.1334098232 744203.0761543177 788947.0041139295 749620.3765795302 838490.6616541995 763455.0667821318 758782.974763083 740213.4348584891 748613.5377105554 721669.4232687879 1.0810768868050584 1.0312243420033844 1.0932249291377887 1.0387309651892123 1.1618763863602146 1.0579013633750431 1.0514273575928852 1.0256959918098045 1.0373358127322683 1.0 19.460978604310604 -6.982995052137363 2.0995863009138063 1.0228003571013018 1.0782807745908032 0.35117979145784406 0.03467312795077119 0.4042636415214043 3.5418849829119874 0.019831061638454446 0.010640755158006774 1.0399320135767492e-07 6.982995052137363 0.05548041748950139 IY(ph)ITT(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 1 IYITTKR 7 1 E7EQI7;Q12768 E7EQI7 KIAA0196 WASH complex subunit strumpellin 2 IY(0.502)IT(0.502)T(0.997)KR 53.493 0.055677 595770000.0 290730.0 254780.0 202810.0 199110.0 378430.0 397090.0 254800.0 233370.0 273890.0 418630.0 True False 274602.6273441137 242539.98636742312 215883.45710747337 218033.35453539572 408210.2880278371 394611.6140169434 280557.67060836096 232560.4939389672 224158.4802050335 414921.2638892119 0.661818641855471 0.5845446051475051 0.5202998156419295 0.5254812744270748 0.9838259051886848 0.9510517979196857 0.6761708666810401 0.5604930722496381 0.5402434141454029 1.0 18.662478068791295 -5.713244713136391 24.999571366452503 0.7661547707720175 0.5700909872396634 0.29690659882009085 0.15835825532627254 179.8266540023425 93278.80629232814 0.05122190239377285 0.0661270477744984 1.9353311501528615e-06 5.713244713136391 -0.1960637835323541 IY(ph)QWINELSSPETR ddPTM_KYSE-520_SHP099_60min_R1 1 IYQWINELSSPETR 14 0 F8WBZ6;Q92600-3;Q92600;Q92600-2 F8WBZ6 RQCD1 Cell differentiation protein RCD1 homolog 1 IY(1)QWINELSSPETR 96.06700000000001 0.02839 0.0 20280.0 23043.0 20536.0 19091.0 21161.0 18848.0 18626.0 19976.0 24927.0 21715.0 True False 19155.027972822285 21935.97969175185 21859.783418761748 20905.402900081554 22826.2503103799 18730.36264068938 20508.89785224228 19906.70791843345 20400.885158533994 21522.62199401436 0.889995093448627 1.0192057314323715 1.015665443775445 0.9713223094238025 1.0605701441361601 0.8702639783339813 0.9528995982899293 0.9249202036800949 0.9478810325344035 1.0 14.393566224513519 -6.2628471466684275 24.998062346195812 0.9353571434878521 0.9931372006240153 0.20620298929305325 0.050830910289276623 192.74559239416635 3422600.125773979 0.016743563866243368 0.015571479738195929 5.459499786355144e-07 6.2628471466684275 0.05778005713616319 IY(ph)VDDGLISLQVK ddPTM_KYSE-520_SHP099_60min_R1 1 IYVDDGLISLQVK 13 0 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 IY(1)VDDGLISLQVK 93.258 0.0080187 622070000.0 177280.0 179970.0 164070.0 140630.0 148600.0 187500.0 146930.0 183790.0 212270.0 189650.0 True False 167445.92500108154 171323.97105952274 174646.2147212816 153995.43291804858 160293.97458165762 186329.74295040665 161783.11829861262 183152.47538690863 173727.1188912429 187969.84854546725 0.8908126824424117 0.9114438958441885 0.9291182392959004 0.8192560355274173 0.8527642907733938 0.9912746346940644 0.8606865385619522 0.974371564398035 0.9242286474962007 1.0 17.520141738241225 -7.732462527742018 0.6262037222830731 0.9971948204576397 0.8879333966920622 0.33138627528596976 0.04728368600063189 0.8834241511182864 0.8095226165328813 0.04744344220348602 0.02184661198340011 1.8515586454638286e-08 7.732462527742018 -0.10926142376557757 IYCVACQELDS(ph)DVDKDNPALNAQAALSQAR ddPTM_KYSE-520_SHP099_60min_R1 2 IYCVACQELDSDVDKDNPALNAQAALSQAR 30 1 H0YEB6;O60232;G3V1B8 H0YEB6 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 1 IYCVACQELDS(1)DVDKDNPALNAQAALSQAR;IYCVACQELDS(1)DVDKDNPALNAQAALSQAR 343.96 2.9445999999999993e-79 2298700000.0 626750.0 605970.0 527230.0 513570.0 568170.0 603670.0 562160.0 552210.0 686490.0 582920.0 True False 591982.9281048502 576858.2916204862 561216.0893978268 562379.5383895485 612881.7465549146 599902.2716099826 618988.6189528888 550294.5123967836 561840.7210046132 577755.7823048971 1.024624843637558 0.998446591601679 0.9713725186079716 0.9733862569855959 1.060797252620971 1.038331921520083 1.0713672418534654 0.9524690695460293 0.9724536529313608 1.0 19.140100268006144 -4.245068877552981 21.554640103522008 1.0057374332285223 1.024624923902127 0.023531001316483557 0.03828864781481662 2689.6889844982697 3541031.7130273446 0.010369260471274034 0.21522948569007216 5.687627199554224e-05 4.245068877552981 0.018887490673604734 IYEDGDDDMKR ddPTM_KYSE-520_SHP099_60min_R1 2 IYEDGDDDMKR 11 1 Q9HB71-3;Q9HB71 Q9HB71-3 CACYBP Calcyclin-binding protein 0 ; 142.08 0.00021554 1124540000.0 1332660.0 1114490.0 782600.0 739100.0 1179300.0 1255320.0 886340.0 1015010.0 1109840.0 1079280.0 False True 1258734.6932081531 1060948.227516406 833047.6482042734 809343.8417814818 1272104.2007008672 1247485.0822426882 975939.8970447975 1011489.1672151145 908321.0327896406 1069718.4188671347 1.1766972233133954 0.9918014019427499 0.7787541408200646 0.7565952193649261 1.18919537914292 1.1661808007043704 0.9123334513379217 0.9455658137459324 0.8491216162769086 1.0 20.0287996564498 -4.292441277111248 4.430789921025987 0.9521029355720606 1.1868236540788213 0.1974161941702961 0.13611463333968807 0.32734359223740195 14.718381096132157 0.03746017478154775 0.2214995694520063 5.099865504630916e-05 4.292441277111248 0.23472071850676068 IYEFPET(ph)DDEEENKLVK ddPTM_KYSE-520_SHP099_60min_R1 8 IYEFPETDDEEENKLVK 17 1 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181 G3V1Q4 SEPT7 Septin-7 1 IYEFPET(1)DDEEENKLVK;IYEFPET(1)DDEEENKLVK;IYEFPET(1)DDEEENKLVK;IYEFPET(1)DDEEENKLVK;IYEFPET(1)DDEEENKLVK;IYEFPET(1)DDEEENKLVK;IYEFPET(1)DDEEENKLVK;IYEFPET(1)DDEEENKLVK 250.28 3.0146999999999995e-23 8076840000.0 6183820.0 5865070.0 4984970.0 5291980.0 5511390.0 5105320.0 4597780.0 5273860.0 7104690.0 5279710.0 True False 5840791.177460441 5583303.233550449 5306309.1424340075 5794928.188108196 5945105.037480494 5073455.804157697 5062568.47240859 5255566.210588182 5814657.390660125 5232935.876952225 1.1161595163406137 1.0669542614006355 1.0140214340873055 1.1073952221794254 1.1360936149943903 0.969523786160473 0.9674432462866598 1.0043245960141858 1.1111654198305803 1.0 22.319189149971848 -6.2677626867802045 24.986732856824297 1.0080711873164525 1.0839023927180145 0.39051521524594257 0.04830226068906397 609.2988617706836 2407654.798434754 0.01778233182136343 0.016073776970980374 5.398055099600234e-07 6.2677626867802045 0.07583120540156196 IYEKDEEK ddPTM_KYSE-520_SHP099_60min_R1 1 IYEKDEEK 8 1 F6TLX2;Q9HC38-2;I3L1I0;I3L3Q4;Q9HC38-3;Q9HC38 F6TLX2 GLOD4 Glyoxalase domain-containing protein 4 0 71.016 0.023921 294300000.0 474150.0 417070.0 305330.0 250890.0 424510.0 439660.0 308280.0 365070.0 443580.0 321450.0 False True 447847.95430540846 397033.3311651672 325012.06034527294 274734.510167171 457916.5218685025 436915.91885640385 339443.95092286286 363803.6573779788 363037.05374182627 318602.2030843155 1.4056649639264707 1.2461725855049894 1.020118684676079 0.8623120226650307 1.4372672801239812 1.3713524722262436 1.0654162075364926 1.1418742678364375 1.1394681211471454 1.0 18.28139671734469 -8.096972995603068 0.9491169601072881 1.0035896193504925 1.197829775742408 0.11393882154236623 0.17151489821620236 1.8076597057336463 3.5726519367084246 0.1774284108441827 0.0600840487541914 7.998839901847238e-09 8.096972995603068 0.1942401563919154 IYGADDIELLPEAQHK ddPTM_KYSE-520_SHP099_60min_R1 2 IYGADDIELLPEAQHK 16 0 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 0 ; 171.91 5.6018e-08 452430000.0 787080.0 725770.0 513130.0 465800.0 762960.0 711600.0 515280.0 591250.0 606360.0 589150.0 False True 743419.1033949194 690902.9197970199 546207.1808370289 510069.49195212364 823000.6113514222 707158.6404453828 567369.5310481801 589199.0917487867 496260.3090916946 583930.5893517635 1.2731292330826653 1.1831935719689033 0.9353974441438111 0.8735104843854217 1.4094151365919303 1.2110320187719879 0.9716386525974461 1.0090224805706307 0.8498618125873592 1.0 19.15543736349179 -6.82269435978707 8.005178643032092 0.9571339864659298 1.1388759371041923 0.27576314147221614 0.15046974248147613 0.4135243981121596 47.430248130254995 0.06851526637761614 0.04624212747973099 1.5042001935121735e-07 6.82269435978707 0.18174195063826248 IYGFYDECKR ddPTM_KYSE-520_SHP099_60min_R1 1 IYGFYDECKR 10 1 P62136-3;P62136;P62136-2;F8VR82;F8VYE8;F8W0W8;P36873;P36873-2;E7ETD8;H0Y3Y6;P62140 P62136-3;P62140 PPP1CA;PPP1CC;PPP1CB Serine/threonine-protein phosphatase PP1-alpha catalytic subunit;Serine/threonine-protein phosphatase;Serine/threonine-protein phosphatase PP1-gamma catalytic subunit;Serine/threonine-protein phosphatase PP1-beta catalytic subunit 0 70.41199999999999 0.057112 518300000.0 407430.0 367910.0 257220.0 215630.0 400860.0 330450.0 296500.0 336480.0 412700.0 357640.0 False True 384829.04570843064 350235.05135583127 273800.8127665515 236123.41036847627 432405.4014185945 328387.53897579596 326473.11356114247 335312.8294150223 337764.0833203742 354471.5878397093 1.085641441825371 0.988048304492619 0.772419630118178 0.6661278885777733 1.219859126238706 0.9264142747719785 0.9210134881353943 0.9459512156067342 0.9528664494066865 1.0 18.43531046938973 -5.7537843588748885 24.999996667472328 0.9845846366768682 0.8783700754781003 0.15280227635794896 0.132958065747237 406.4581682055443 1327416.4551779507 0.04198234145284334 0.053147269338014745 1.7628511412109173e-06 5.7537843588748885 -0.10621456119876793 IYHLPDAES(ph)DEDEDFK ddPTM_KYSE-520_SHP099_60min_R1 17 IYHLPDAESDEDEDFK 16 0 B5MCX3;Q15019;Q15019-3;Q15019-2;H7C2Y0 B5MCX3 SEPT2 Septin-2 1 IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK;IYHLPDAES(1)DEDEDFK 313.93 2.7159999999999998e-47 20702640000.0 13966060.0 11453940.0 10210400.0 11981200.0 12178650.0 12516850.0 12622180.0 13476960.0 12922430.0 12554850.0 True False 13191334.811149634 10903675.52968554 10868578.721217608 13119889.64572087 13137040.467960315 12438727.696260234 13898153.135005662 13430211.571306104 10576042.459950829 12443623.796525484 1.0600878833087937 0.8762459961807967 0.8734255309335484 1.0543463753206854 1.0557246572841945 0.9996065374246835 1.11688953011311 1.0792846031761338 0.8499166025015862 1.0 23.568903348390354 -5.273419736052499 24.795363615127485 1.029950428846255 0.9305524209837981 0.17858725452273128 0.08274890337488007 969.4546006964691 2006447.5231051885 0.023210095280997257 0.034740359221698325 5.3281968806493064e-06 5.273419736052499 -0.099398007862457 IYHLPDAES(ph)DEDEDFKEQTR ddPTM_KYSE-520_SHP099_60min_R1 22 IYHLPDAESDEDEDFKEQTR 20 1 B5MCX3;Q15019;Q15019-3;Q15019-2;H7C2Y0 B5MCX3 SEPT2 Septin-2 1 IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IY(0.001)HLPDAES(0.999)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR;IYHLPDAES(1)DEDEDFKEQTR 286.63 5.7927e-44 511910880000.0 31430120.0 29021480.0 26925790.0 27800080.0 28138420.0 27657520.0 26485122.0 27746610.0 33408750.0 27226450.0 True False 29686628.58920913 27627244.538670387 28661469.506187208 30442191.244801205 30352753.5682907 27484899.158643868 29162496.601641458 27650363.486017436 27342563.16605173 26985244.834857542 1.1001059568250475 1.0237907681676306 1.0621163410444379 1.1281050600466753 1.124790742275692 1.018515834369637 1.0806830466096606 1.0246474936666405 1.0132412484445066 1.0 24.685667441032276 -7.348589745672076 1.1250087502260284 0.9998664940115511 1.0802044067296996 0.43048953205099694 0.03449007310089079 0.5319941984871653 1.1861635742361505 0.032558520200666165 0.012212967609369633 4.481364343569052e-08 7.348589745672076 0.0803379127181485 IYHPNIDEK ddPTM_KYSE-520_SHP099_60min_R1 6 IYHPNIDEK 9 0 P68036-2;P68036;P68036-3;A0A1B0GUS4 P68036-2 UBE2L3 Ubiquitin-conjugating enzyme E2 L3 0 ;;;;; 138.11 0.00075961 9405140000.0 22583090.0 20846380.0 14281260.0 12547660.0 20539990.0 20960780.0 15733320.0 17641080.0 17305900.0 17581730.0 False True 21330360.9794262 19844888.613745674 15201852.870423924 13740185.833808467 22156370.35644347 20829955.99701346 17323797.528006017 17579887.210939027 14163584.806237135 17425969.55057896 1.224055907908867 1.138811160902456 0.8723676938778341 0.7884890303479248 1.2714569649702703 1.1953398596591378 0.9941367955294317 1.0088326597790338 0.8127860412660118 1.0 24.05473559157634 -7.379373123183241 2.506724215091135 0.9114264951953476 1.068226578755453 0.1498475949034097 0.15097888871957774 0.6491020146352252 7.6803458017924005 0.11804831548267995 0.045666658689236125 4.1747154273656545e-08 7.379373123183241 0.15680008356010544 IYISNTFS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 IYISNTFSPSK 11 0 J3KMX2;B9EGA3;Q92925-3;Q92925-2;Q92925 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 1 IYISNT(0.003)FS(0.976)PS(0.021)K 119.32 0.00023553 421550000.0 512440.0 531890.0 400350.0 384620.0 438700.0 588940.0 480780.0 528480.0 582100.0 517400.0 True False 484013.931676186 506337.2060168334 426157.2015826488 421174.16915978084 473223.1941384464 585264.2070037998 529381.9343606277 526646.8262281591 476405.31354686175 512816.23853110825 0.9438350335055252 0.9873657812926652 0.831013469470697 0.8212964752562759 0.922792919923771 1.1412747160273413 1.0323033761118205 1.0269698707994637 0.9289981044895524 1.0 18.968082420631728 -6.023614547088436 24.270751254270685 1.0284433062504013 0.8945625549731245 0.47292538727188227 0.06625178387714574 484.027943050859 497477.4299058097 0.023138391057617638 0.023288526671108846 9.470773557219517e-07 6.023614547088436 -0.13388075127727672 IYISNTFS(ph)PSKAEGDSAGTAGTPGGTPAGDK ddPTM_KYSE-520_SHP099_60min_R1 1 IYISNTFSPSKAEGDSAGTAGTPGGTPAGDK 31 1 J3KMX2;B9EGA3;Q92925-3;Q92925-2;Q92925 J3KMX2 SMARCD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 1 IYISNT(0.012)FS(0.781)PS(0.207)KAEGDSAGTAGTPGGTPAGDK 226.41 6.9691e-27 0.0 248470.0 319660.0 213530.0 201000.0 215370.0 289350.0 210490.0 299400.0 302070.0 306030.0 True False 234686.8737873351 304303.05378055765 227294.48546007986 220102.9795671466 232318.39371232575 287544.0593210673 231768.38338443465 298361.4512804853 247221.70256502417 303318.81228773703 0.7737300301858768 1.00324490751298 0.7493583525062129 0.7256489563144884 0.765921480306806 0.9479928302247691 0.7641081726397254 0.9836562692242478 0.8150556198621222 1.0 18.21047545328437 -7.26114817912559 24.999998391667162 0.9245169573492749 0.8223915663458945 0.22531116087563818 0.0965957040670149 45.86585149375896 3938080.7668863763 0.0488002676060825 0.025906588188885225 5.480899274467081e-08 7.26114817912559 -0.10212539100338036 IYLTADNLVLNLQDESFTRGS(ph)DSLIK ddPTM_KYSE-520_SHP099_60min_R1 2 IYLTADNLVLNLQDESFTRGSDSLIK 26 1 Q99623-2;Q99623 Q99623-2 PHB2 Prohibitin-2 1 IYLTADNLVLNLQDES(0.174)FT(0.174)RGS(0.619)DS(0.033)LIK;IYLTADNLVLNLQDES(0.148)FT(0.148)RGS(0.705)DSLIK 117.49 0.00020937 20602000.0 38138.0 49624.0 46585.0 48133.0 53164.0 42953.0 40536.0 38582.0 66724.0 34845.0 True False 36022.40911378187 47239.9885528574 49587.9436386354 52707.545848285874 57347.70433821827 42684.91439439363 44633.774473235935 38448.16804710649 54608.60357516037 34536.30040899977 1.0430303387213655 1.3678358131419077 1.4358209493021823 1.5261491596983816 1.660505139782549 1.2359434533778384 1.2923727771838838 1.113268288490082 1.581194364435456 1.0 15.075825926589589 IYNGDY(ph)YR ddPTM_KYSE-520_SHP099_60min_R1 1 IYNGDYYR 8 0 M0R0W6;P30530-2;P30530 M0R0W6 AXL Receptor protein-tyrosine kinase;Tyrosine-protein kinase receptor UFO 1 IYNGDY(0.999)Y(0.001)R 117.4 0.0033025999999999997 1061200000.0 1003000.0 1057400.0 958140.0 1144900.0 1189700.0 1030400.0 1008500.0 1212400.0 1484300.0 1043700.0 True False 947361.5905690698 1006600.9168102426 1019903.2374782038 1253710.9517732644 1283322.621532961 1023968.8913925266 1110449.0220115061 1208194.4673762885 1214788.536158062 1034453.6299863121 0.9158086579304723 0.973074952449596 0.9859342245158917 1.2119547125470027 1.2405801326734596 0.9898644672995885 1.0734642808747257 1.1679542053443954 1.1743286513230526 1.0 19.980437546288034 -5.109910398683714 5.582319844267337 1.1265528705963714 0.9524324866244774 0.4741989513732714 0.07982587009089324 0.20124506952724477 8.622348723306128 0.02272346677435132 0.04033394246060937 7.764072843068053e-06 5.109910398683714 -0.174120383971894 IYNISGNGS(ph)PLADSK ddPTM_KYSE-520_SHP099_60min_R1 4 IYNISGNGSPLADSK 15 0 Q53HL2 Q53HL2 CDCA8 Borealin 1 IYNIS(0.002)GNGS(0.998)PLADSK;IYNIS(0.001)GNGS(0.999)PLADSK;IYNIS(0.028)GNGS(0.972)PLADSK;IYNIS(0.195)GNGS(0.805)PLADSK 182.49 1.4946e-08 11276990000.0 10549900.0 10949600.0 8989600.0 7244680.0 7725100.0 9973100.0 8460550.0 10105000.0 10761800.0 9773600.0 True False 9964676.016295752 10423564.780315323 9569083.999868553 7933212.209007536 8333021.420193551 9910854.1835664 9315824.961010855 10069948.113524739 8807728.402900904 9687013.507745741 1.0286633757997747 1.0760349174676627 0.9878260200852521 0.8189533546808968 0.8602260555877684 1.0231072946932176 0.9616818386349845 1.0395307186753484 0.9092305276397354 1.0 23.20762052271852 -4.98414460859461 9.22521498122182 0.943463935295477 1.047580119020076 0.2944517332513842 0.06623637123547428 0.2900402677105178 145.85749887971684 0.018746041992463883 0.03832053424175553 1.0371830037619811e-05 4.98414460859461 0.10411618372459897 IYNS(ph)PLENHLVDSTFVPKPAVMR ddPTM_KYSE-520_SHP099_60min_R1 1 IYNSPLENHLVDSTFVPKPAVMR 23 1 E9PPH6;Q8NEV8-2;Q8NEV8;A0A087WZJ0 E9PPH6 EXPH5 Exophilin-5 1 IY(0.002)NS(0.998)PLENHLVDSTFVPKPAVMR 59.573 0.019878 588660000.0 170850.0 187680.0 183360.0 186570.0 178080.0 182150.0 169790.0 191200.0 230780.0 135110.0 True False 161372.60991896896 178663.5710865767 195179.67898637278 204301.55670568426 192093.8828634022 181013.13428488804 186954.03019071268 190536.77182641567 188876.1694903709 133913.03051398927 1.2050553206031067 1.3341761470173923 1.457510730936548 1.52562865556494 1.4344674459692333 1.3517215881838955 1.3960854255417845 1.422839667619285 1.4104390645586942 1.0 17.03093682451841 -10.495743344677932 5.639669569266326 0.9994296033670331 1.3981235823181677 0.6798380923350271 0.08086392077503218 0.0006219539568880018 5.561030648276507e-05 0.08396753811909417 0.020337107193648465 3.1934245179468726e-11 10.495743344677932 0.39869397895113456 IYNYYK ddPTM_KYSE-520_SHP099_60min_R1 1 IYNYYK 6 0 P37837;F2Z393 P37837 TALDO1 Transaldolase 0 109.88 0.068218 585390000.0 1026400.0 1000600.0 637280.0 652260.0 949430.0 956610.0 656760.0 741810.0 695250.0 673770.0 False True 969463.5459223267 952529.6740687797 678360.0884840523 714250.5942908798 1024144.7394822536 950639.4421535368 723151.7101599183 739236.8342497548 569010.1258262434 667800.9219851288 1.4517253780370127 1.4263677133557349 1.015811847739795 1.0695561667804727 1.533607854924555 1.4235371813019249 1.082885162856996 1.1069718682811533 0.8520654990034809 1.0 19.349058559665416 -7.100116943847945 2.2282422637125867 0.9674621985693097 1.3064729565594628 0.44809971293406203 0.16778688189854557 0.3433921496938458 3.3006811204094344 0.11031877504185827 0.054253626727303494 7.941143722446552e-08 7.100116943847945 0.3390107579901531 IYPLALS(ph)PIYEDDS(ph)S(ph)QEDILSSEVSPGHHGPR ddPTM_KYSE-520_SHP099_60min_R1 1 IYPLALSPIYEDDSSQEDILSSEVSPGHHGPR 32 0 Q68DQ2;Q68DQ2-1 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 3 IYPLALS(1)PIYEDDS(0.488)S(0.488)QEDILS(0.395)S(0.374)EVS(0.256)PGHHGPR 92.846 0.0013722 53276000.0 19595.0 18117.0 17655.0 16171.0 12621.0 17035.0 14866.0 16190.0 21627.0 20041.0 True False 18508.026288335936 17246.632125828583 18793.06954899877 17707.886978011556 13614.200896333103 16928.67824618759 16368.80035817855 16133.84066877441 17700.08197230371 19863.45233166206 0.9317628164180908 0.868259547125033 0.9461129533380702 0.8914808303381098 0.6853894614599426 0.852252567354745 0.8240662340497031 0.8122374902099619 0.8910878973485404 1.0 14.27782876922922 -5.541935910935748 24.973843290017847 0.8300239838317495 0.9120216770356485 0.13984672705823942 0.07606103368375391 364.84014816958404 478109.60205934016 0.021416244715588784 0.027651972410521124 2.871204255879504e-06 5.541935910935748 0.08199769320389905 IYPLALS(ph)PIYEDDSS(ph)QEDILS(ph)SEVSPGHHGPR ddPTM_KYSE-520_SHP099_60min_R1 1 IYPLALSPIYEDDSSQEDILSSEVSPGHHGPR 32 0 Q68DQ2;Q68DQ2-1 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 3 IYPLALS(1)PIYEDDS(0.202)S(0.669)QEDILS(0.434)S(0.394)EVS(0.3)PGHHGPR 84.537 0.0022608 61425000.0 7566.3 8476.7 7912.3 6600.0 8310.2 8028.5 7941.1 6393.8 10941.0 10444.0 True False 7146.582255954897 8069.4666082139 8422.339518127612 7227.2620156376415 8964.165461429946 7978.391153479139 8743.863885667408 6371.621400124139 8954.3902001653 10351.474285309052 0.6903926975983914 0.7795475683754721 0.8136367135723562 0.6981867332554423 0.8659795903808607 0.7707492607890816 0.844697445471783 0.6155279165564684 0.8650352552074141 1.0 13.337548634485106 -8.005260841777908 24.96912572255829 1.000000015886044 0.7652973132383729 0.5232189339883639 0.07180264384399333 135.50179506190787 643124.7036334833 0.06563154542377987 0.016945992167828012 9.879595376638659e-09 8.005260841777908 -0.23470270264767112 IYPLALS(ph)PIYEDDSSQEDILS(ph)S(ph)EVSPGHHGPR ddPTM_KYSE-520_SHP099_60min_R1 1 IYPLALSPIYEDDSSQEDILSSEVSPGHHGPR 32 0 Q68DQ2;Q68DQ2-1 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 3 IYPLALS(1)PIYEDDS(0.11)S(0.292)QEDILS(0.565)S(0.572)EVS(0.461)PGHHGPR 120.15 0.00011771 66463000.0 31359.0 41063.0 25099.0 34843.0 37738.0 32651.0 28126.0 43846.0 41676.0 31660.0 True False 29619.45375738334 39090.27184318041 26716.921699819904 38154.46824407008 40707.76590015203 32447.21299772652 30969.250563307545 43693.90845973334 34108.688966464586 31379.51703110729 0.943910440942123 1.2457257326309152 0.8514127758351016 1.2159036165612942 1.2972719070149301 1.0340252517449773 0.9869256602199123 1.392434065075587 1.0869730382609712 1.0 14.937535527196808 IYQFPDCDS(ph)DEDEDFKLQDQALK ddPTM_KYSE-520_SHP099_60min_R1 6 IYQFPDCDSDEDEDFKLQDQALK 23 1 A0A5F9ZHH3;O43236-2;O43236-3;O43236;O43236-4;J3QRT6;J3KSZ7;O43236-5 A0A5F9ZHH3 SEPT4 Septin-4 1 IYQFPDCDS(1)DEDEDFKLQDQALK;IYQFPDCDS(1)DEDEDFKLQDQALK;IYQFPDCDS(1)DEDEDFKLQDQALK;IYQFPDCDS(1)DEDEDFKLQDQALK;IYQFPDCDS(1)DEDEDFKLQDQALK;IYQFPDCDS(1)DEDEDFKLQDQALK 269.59 9.174e-38 4045117000.0 2391066.0 2216655.0 1824447.0 1996927.0 2024882.0 1978805.0 1953032.0 2040703.0 2635006.0 2042066.0 True False 2258428.802508102 2110163.5665330137 1942053.7728384119 2186714.341682003 2184228.6933974163 1966454.5439945562 2150463.534315493 2033624.277596662 2156555.33349573 2023974.88394331 1.1158383537388592 1.0425838696287486 0.9595246404711845 1.0804058681902355 1.0791777658534398 0.9715805070482461 1.0624951679863464 1.0047675461439285 1.0655049875392295 1.0 20.948759956670994 -6.213504921140909 24.99888964856823 1.023768949199165 1.0508391984822663 0.11844020693788171 0.04604337659760496 1188.1840207138412 619664.9202908626 0.015395581635761517 0.015395580073481718 6.11638872223892e-07 6.213504921140909 0.0270702492831012 IYQY(ph)IQSR ddPTM_KYSE-520_SHP099_60min_R1 11 IYQYIQSR 8 0 A0A2R8Y6L5;A0A2R8Y6I6;Q13627-5;Q13627-2;Q13627;A0A2R8Y443;A0A2R8YDF3;Q13627-4;Q13627-3;Q9Y463-2;Q9Y463-3;Q9Y463 A0A2R8Y6L5 DYRK1A;DYRK1B Dual specificity tyrosine-phosphorylation-regulated kinase 1A;Dual specificity tyrosine-phosphorylation-regulated kinase 1B 1 IYQY(1)IQSR;IYQY(1)IQSR;IY(0.001)QY(0.996)IQS(0.003)R;IYQY(1)IQSR;IYQY(1)IQSR;IYQY(1)IQSR;IYQY(1)IQSR;IYQY(1)IQSR;IYQY(1)IQSR;IYQY(1)IQSR;IYQY(1)IQSR 221.33 9.775e-09 68462300000.0 7330710.0 6588370.0 6310910.0 5297490.0 6083940.0 5976220.0 5686890.0 5761720.0 7356310.0 5996290.0 True False 6924060.902891908 6271854.81585502 6717721.356413022 5800961.856851551 6562711.465116613 5938920.194213756 6261776.339897887 5741733.938115554 6020589.541484137 5943167.535643023 1.1650455521178162 1.0553050672458342 1.130326768701161 0.9760724095461518 1.1042447357840732 0.9992853404512334 1.053609258420542 0.9661066937252888 1.0130270609698935 1.0 22.502800619873028 -1.00000000024642 0.29218476326624415 0.9937702016930162 2.260709815017385 0.5139893773072142 0.044898035176883476 41.49994696691494 0.5898090327046064 0.043920398373506496 27.237039208688497 0.0999999999432597 1.00000000024642 1.2669396133243689 IYYPNIVK ddPTM_KYSE-520_SHP099_60min_R1 1 IYYPNIVK 8 0 J3KSB5 J3KSB5 NF1 0 69.382 0.021928 0.0 350290.0 279890.0 277980.0 154370.0 444870.0 335650.0 198500.0 253930.0 252960.0 345610.0 False True 330858.7154141968 266443.66427654517 295899.0355837257 169041.27838696726 479878.73803594895 333555.08384695434 218566.31717331117 253049.1760977078 207028.8406026699 342548.16428051086 0.9658750211350084 0.7778283233138447 0.8638173151656875 0.49348178158251715 1.4009088007926933 0.9737465227628774 0.6380601035547467 0.7387258274444792 0.6043787770327536 1.0 18.385947328154696 -6.757810915285422 24.98074808588566 0.7235183264587711 0.9074095273243352 0.10770913464536536 0.23228406680921565 208.64703796746537 1436478.002795845 0.09280248349184517 0.06901536535683626 1.7465824208252365e-07 6.757810915285422 0.1838912008655641 KAAAGPLDMSLPST(ph)PDIK ddPTM_KYSE-520_SHP099_60min_R1 2 KAAAGPLDMSLPSTPDIK 18 1 P17544-4;P17544-2;P17544;K7ELQ4 P17544-4 ATF7 Cyclic AMP-dependent transcription factor ATF-7 1 KAAAGPLDMSLPS(0.119)T(0.881)PDIK;KAAAGPLDMSLPS(0.143)T(0.857)PDIK 137.09 1.5159000000000002e-05 648760000.0 829980.0 1105970.0 661050.0 700070.0 675360.0 1052870.0 824840.0 1022110.0 1184700.0 1000380.0 True False 783939.354875889 1052837.5411051868 703662.3407173972 766604.4423162804 728506.9897272413 1046298.6477877042 908222.8768626379 1018564.5389722685 969588.3438566697 991517.4114838621 0.790646080236432 1.0618447330436243 0.7096822835055681 0.7731628647539466 0.7347394824231974 1.0552498984580199 0.915992867440856 1.0272785199484584 0.9778833257255923 1.0 19.919278581475773 -6.265851275839427 24.993088203255013 0.9920303277822714 0.8197175668799708 0.4703644979944044 0.09604770032646463 380.6694880125891 2156458.63482236 0.03425699744384302 0.031239467363901076 5.42186530409967e-07 6.265851275839427 -0.17231276090230063 KAAALEAMK ddPTM_KYSE-520_SHP099_60min_R1 2 KAAALEAMK 9 1 P31948;P31948-2;P31948-3;H0YGI8 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ; 87.568 0.011134999999999999 759100000.0 1263580.0 1063710.0 894640.0 803260.0 1142740.0 1142590.0 911650.0 1079190.0 1068280.0 980350.0 False True 1193486.6985157193 1012607.774938738 952309.9258746121 879601.5888910752 1232667.13669881 1135458.6719877583 1003808.4788465942 1075446.5417748406 874307.2811472977 971664.8617007583 1.2282904791130287 1.0421368671975182 0.9800806465386962 0.9052520303671991 1.2686134749600855 1.1685702722647628 1.0330809710351911 1.106808102427855 0.8998033330308454 1.0 19.890099272079098 -7.753724654147345 24.982581904472383 0.9499016548340353 1.0865411040578599 0.2181166250590061 0.10697277864095178 256.0266453288623 829110.2074167145 0.07895706194596758 0.028590277011227495 1.763093506210874e-08 7.753724654147345 0.13663944922382454 KAALEEVER ddPTM_KYSE-520_SHP099_60min_R1 2 KAALEEVER 9 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 131.82 0.0013387 597570000.0 890270.0 854530.0 598640.0 551320.0 858190.0 913780.0 607600.0 759640.0 727810.0 778040.0 False True 840884.9483907536 813477.0961243192 637229.292257866 603717.2870395986 925724.6705668416 908076.7600705188 669022.1376045527 757004.9861413083 595658.050597048 771147.1709059611 1.090433810971339 1.0548921487562848 0.8263394022560372 0.7828820617085813 1.2004513606388252 1.1775660915719754 0.8675673890089882 0.9816608485407031 0.7724310910682011 1.0 19.55664669446604 KAALLAQYADVT(ph)DEEDEADEKDDSGATTMNIGSDK ddPTM_KYSE-520_SHP099_60min_R1 7 KAALLAQYADVTDEEDEADEKDDSGATTMNIGSDK 35 2 Q96MW1 Q96MW1 CCDC43 Coiled-coil domain-containing protein 43 1 KAALLAQYADVT(1)DEEDEADEKDDSGATTMNIGSDK;KAALLAQYADVT(1)DEEDEADEKDDSGATTMNIGSDK;KAALLAQYADVT(1)DEEDEADEKDDSGATTMNIGSDK;KAALLAQYADVT(1)DEEDEADEKDDSGATTMNIGSDK;KAALLAQYADVT(1)DEEDEADEKDDSGATTMNIGSDK;KAALLAQYADVT(1)DEEDEADEKDDSGATTMNIGSDK;KAALLAQYADVT(1)DEEDEADEKDDSGATTMNIGSDK 432.04 1.3945999999999997e-151 20832960000.0 2998400.0 2845480.0 2559920.0 2344380.0 2424270.0 2410770.0 2627830.0 2625500.0 3276970.0 2375370.0 True False 2832072.7748377877 2708778.8696474456 2724936.539216821 2567189.170336449 2615046.256790545 2395723.4902002728 2893476.7015493303 2616392.7532963036 2681954.8536912245 2354326.069809898 1.2029229133356476 1.150553827009259 1.1574167971715357 1.090413602115759 1.1107408996247063 1.0175835543433105 1.2290042312545801 1.1113128240165844 1.139160326210796 1.0 21.166882714135586 -13.999999999999998 0.2597764625999854 0.16452926759224398 1.1424464055659738 0.3457104560736862 0.055675617447768326 238.60868714939846 2.348413721657352 106.59354595184327 0.07608343837065884 1.0000000000000041e-14 13.999999999999998 0.9779171379737298 KAALS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 KAALSSPR 8 1 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 KAALS(0.634)S(0.366)PR;KAALS(0.622)S(0.378)PR 77.67699999999999 0.0090687 3441070000.0 6012400.0 5100700.0 4805600.0 4425200.0 4937600.0 5136900.0 4791300.0 4552400.0 5282000.0 5187200.0 True False 5678880.186577751 4855654.715693207 5115376.665231866 4845769.677515105 5326161.028899009 5104838.7016637 5275651.362581791 4536608.786938143 4322921.94838434 5141245.443580538 1.1045728605835217 0.9444510613194076 0.9949683829273367 0.9425283680174481 1.0359670798345877 0.9929186921114034 1.026142676998445 0.8823949054217288 0.840831661476506 1.0 22.29368645746453 -7.265102306977341 24.812070483967982 0.8962099547799817 1.0013646528978764 0.37168761280014073 0.05771162049360602 279.9733597363096 1896469.1350843578 0.02857517016816376 0.014554626334479698 5.4312237280108505e-08 7.265102306977341 0.10515469811789468 KAALSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 KAALSSPR 8 1 Q68E01-4;Q68E01-3;Q68E01-2;Q68E01 Q68E01-4 INTS3 Integrator complex subunit 3 1 KAALS(0.362)S(0.638)PR;KAALS(0.202)S(0.798)PR 86.87899999999999 0.005233600000000001 2893810000.0 6534500.0 5369600.0 5307200.0 4524600.0 5262500.0 5516000.0 4732500.0 4621100.0 5405600.0 5113700.0 True False 6172018.2587971985 5111636.35606608 5649310.603820236 4954616.623629411 5676628.810470883 5481572.597943693 5210907.284749094 4605070.482672843 4424079.304086783 5068396.596398402 1.2177457192641612 1.0085312502376795 1.1146149470297235 0.977551091236656 1.12000485804617 1.0815200613619884 1.0281175092833028 0.9085852685532151 0.8728755179163623 1.0 22.273097987502755 -7.105892305182111 3.122314476455832 0.9177202003433625 1.0802246196983742 0.5190911887601428 0.06816589920763877 0.20153730222711608 3.715656602953482 0.03444257931198288 0.018470810612805547 7.836239389825775e-08 7.105892305182111 0.1625044193550117 KAAS(ph)EELLEK ddPTM_KYSE-520_SHP099_60min_R1 7 KAASEELLEK 10 1 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 KAAS(1)EELLEK;KAAS(1)EELLEK;KAAS(1)EELLEK;KAAS(1)EELLEK;KAAS(1)EELLEK;KAAS(1)EELLEK;KAAS(1)EELLEK 174.62 2.0615e-05 6118010000.0 8545920.0 7606330.0 6694640.0 6545750.0 7204350.0 7039750.0 6676380.0 7050410.0 8924700.0 7265980.0 True False 8071860.781730842 7240910.489465907 7126187.206202722 7167856.111948501 7771291.357855741 6995812.308987326 7351293.645589664 7025953.773288063 7304199.453378605 7201609.070046894 1.1208412874427633 1.005457310864384 0.989527081640981 0.9953131365823814 1.0791048614646805 0.9714235028508388 1.0207848793355558 0.9756088819803589 1.0142454807437975 1.0 22.779887856159753 -4.261330598083296 24.99999985197263 1.0058174276670955 1.1208413206877568 0.5934512210763601 0.028585469412102073 6.133528249936289 1407749.454345412 0.006919507382037716 0.03915060380285273 5.4785975874224194e-05 4.261330598083296 0.1150238930206613 KAAS(ph)LMNLENI ddPTM_KYSE-520_SHP099_60min_R1 2 KAASLMNLENI 11 1 D6RBP0;Q96NL6-3;Q96NL6-2;Q96NL6 D6RBP0 SCLT1 Sodium channel and clathrin linker 1 1 KAAS(1)LMNLENI;KAAS(1)LMNLENI 80.507 0.010414 1272270000.0 2448400.0 2748200.0 2099770.0 1795880.0 1910750.0 2603300.0 1929390.0 2478000.0 2807400.0 2653000.0 True False 2312582.3712356044 2616172.3468677015 2235124.533950787 1966559.8952489893 2061115.154319664 2587051.8390548946 2124431.5702318116 2469404.3963695457 2297646.9287948133 2629496.4840027676 0.8794772631584817 0.9949328180447751 0.8500199743748487 0.7478845882521893 0.7838440427127397 0.983858261379661 0.8079233355725512 0.9391168276484931 0.8737973002714214 1.0 21.326355137063047 -8.569113461835297 0.7161401823974698 1.0015278463055841 0.8656162186716809 0.20162982857400635 0.07704654660378005 3.4133862789039524 2.766112235153102 0.09635579092322039 0.0300556795733613 2.6970347251564815e-09 8.569113461835297 -0.1359116276339032 KAAS(ph)LTEDR ddPTM_KYSE-520_SHP099_60min_R1 2 KAASLTEDR 9 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 KAAS(0.868)LT(0.132)EDR;KAAS(0.998)LT(0.002)EDR 90.73100000000001 0.0035949 0.0 1018780.0 887660.0 881130.0 907450.0 828770.0 951000.0 969360.0 1077070.0 1103640.0 966540.0 True False 962266.2425124206 845015.4811951756 937929.049657847 993693.7751652097 893989.4839437435 945064.4562444616 1067352.3688419182 1073333.8955600278 903246.7965003586 957977.2075567404 1.004477178498452 0.8820830751812285 0.9790724061692189 1.0372833166872124 0.9332053799315398 0.9865208157246121 1.1141730308637845 1.1204169442585146 0.9428687753480397 1.0 19.869631805830384 -6.583463337601893 8.756913125721477 1.054169385590655 0.9663267343585066 0.25460935131115225 0.061774221880033287 0.37331530168943833 49.47477294349147 0.023617587712872045 0.01827724671615759 2.6093759927794166e-07 6.583463337601893 -0.08784265123214852 KAAS(ph)LTEDRDR ddPTM_KYSE-520_SHP099_60min_R1 3 KAASLTEDRDR 11 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 KAAS(0.5)LT(0.5)EDRDR;KAAS(0.918)LT(0.082)EDRDR;KAAS(0.903)LT(0.097)EDRDR 103.76 0.00083405 12006800000.0 14244700.0 12718100.0 12805200.0 11419700.0 11948600.0 13458400.0 13455000.0 14970200.0 18345800.0 12902600.0 True False 13454518.094894568 12107103.385742702 13630643.681044409 12505024.85454199 12888886.84176575 13374401.133460008 14815162.708145577 14918271.870270936 15014665.179982847 12788293.002070893 1.052096483300452 0.9467333430491559 1.0658688910894605 0.9778494168468747 1.0078660881228299 1.045831615782826 1.1584941560024047 1.1665569335841086 1.1740945548832376 1.0 23.60832036847796 -6.62494922860662 3.969040954897351 1.1383991115363712 1.0091590284187535 0.47320250602348424 0.05634467708046589 0.16900029261147334 4.972127754728891 0.021263981097530884 0.016104916850448434 2.3716509483855242e-07 6.62494922860662 -0.1292400831176177 KAAS(ph)PS(ph)PQS(ph)VR ddPTM_KYSE-520_SHP099_60min_R1 4 KAASPSPQSVR 11 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 KAAS(1)PS(1)PQS(1)VR;KAAS(1)PS(1)PQS(1)VR;KAAS(1)PS(1)PQS(1)VR;KAAS(1)PS(1)PQS(1)VR 166.52 1.3055999999999998e-05 2427400000.0 4128990.0 3771830.0 3542660.0 3475130.0 3631120.0 3357660.0 3460360.0 3674160.0 4182760.0 3408860.0 True False 3899946.693762503 3590625.625167746 3771025.532056415 3805405.3103640648 3916868.4857533546 3336703.598479261 3810166.958659139 3661415.1965153906 3423276.2227989594 3378660.1524529457 1.1542879478218895 1.0627365473739379 1.1161304664864289 1.1263060321711544 1.1592963805222207 0.9875818957573393 1.127715362521121 1.0836885129915068 1.0132052554364255 1.0 21.688019811501366 -7.660983894280155 0.5471973559474745 0.9952299104936788 1.116208500904562 0.39432936835758914 0.04743583874715521 0.899548896499313 0.6561568538514789 0.049008477526286974 0.025779898908966453 2.1828108594252954e-08 7.660983894280155 0.1209785904108831 KAAS(ph)PS(ph)PQSVR ddPTM_KYSE-520_SHP099_60min_R1 4 KAASPSPQSVR 11 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KAAS(1)PS(1)PQSVR;KAAS(1)PS(0.997)PQS(0.003)VR;KAAS(1)PS(0.997)PQS(0.004)VR;KAAS(0.943)PS(0.955)PQS(0.102)VR 79.337 0.010671 16401780000.0 6934520.0 6309380.0 6146060.0 5851610.0 5906220.0 5797710.0 5695760.0 5321210.0 7054020.0 5549610.0 True False 6549848.351977094 6006267.914227547 6542244.861643697 6407745.255049306 6371005.912205101 5761524.341338675 6271543.00606074 5302751.9644897515 5773187.785373368 5500444.772931246 1.1907852223533206 1.091960407235712 1.1894028813523136 1.1649503848457967 1.158271044472268 1.047465174033244 1.1401883420272152 0.9640587594998901 1.0495856287448504 1.0 22.391116850826624 -6.84530060618628 0.9792448234978791 1.0014682365987868 1.158697653050841 0.6327887419325025 0.04666792901082456 0.3504798568182113 0.6484902675224957 0.03439351698378908 0.018303098213734336 1.4279052613022584e-07 6.84530060618628 0.15722941645205424 KAAS(ph)PS(ph)PQSVRR ddPTM_KYSE-520_SHP099_60min_R1 3 KAASPSPQSVRR 12 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KAAS(0.894)PS(0.676)PQS(0.43)VRR;KAAS(0.726)PS(0.799)PQS(0.475)VRR;KAAS(0.971)PS(0.692)PQS(0.338)VRR 56.746 0.041691000000000006 2364320000.0 2384500.0 2599490.0 2491830.0 1621870.0 1868970.0 1705830.0 1372090.0 1204620.0 2566860.0 1495590.0 True False 2252227.0316170966 2474606.5984859597 2652457.3488689684 1776012.0371670048 2016047.3060153448 1695183.2822244887 1510794.247507952 1200441.4543804221 2100782.929274862 1482340.2361514128 1.5193725277703682 1.6693917753394858 1.789371484481539 1.1981136272587793 1.36004356951788 1.143585825225711 1.0191953309116226 0.8098285569695645 1.4172069799097586 1.0 20.499445191510265 -5.665686996736881 1.2060289064103298 1.0602881923641825 1.6635941156029261 0.628746601339796 0.18124373506392405 0.29244374845931026 0.8898212877469949 0.07131214299296425 0.11528607109795505 2.1593000920057875e-06 5.665686996736881 0.6033059232387437 KAAS(ph)PSPQS(ph)VR ddPTM_KYSE-520_SHP099_60min_R1 7 KAASPSPQSVR 11 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KAAS(0.96)PS(0.04)PQS(1)VR;KAAS(0.9)PS(0.103)PQS(0.997)VR;KAAS(0.933)PS(0.067)PQS(1)VR;KAAS(0.947)PS(0.059)PQS(0.994)VR;KAAS(0.973)PS(0.348)PQS(0.679)VR;KAAS(0.613)PS(0.405)PQS(0.982)VR;KAAS(0.955)PS(0.272)PQS(0.773)VR 212.43 1.4119999999999999e-09 37537790000.0 23205750.0 20773750.0 20581360.0 19363350.0 19863300.0 19786550.0 19624400.0 19134250.0 24761750.0 19564660.0 True False 21918480.787984233 19775747.86796554 21908067.3969403 21203636.96219655 21426428.70328287 19663054.802001964 21608225.8676873 19067877.752717543 20265640.3929205 19391332.33347514 1.1303236111397303 1.0198240908814082 1.1297865984752649 1.0934595208598865 1.10494876446909 1.014012573445392 1.114323941031383 0.9833196308951284 1.0450875702819062 1.0 24.20890859529227 -7.12141668703015 0.8462328411405149 1.0033940633358998 1.0918220960059013 0.3575077643666724 0.04332461166855621 0.6787710410453535 0.8916387140475375 0.03628348819768891 0.01688319285269634 7.561070943846685e-08 7.12141668703015 0.08842803267000154 KAAS(ph)PSPQSVR ddPTM_KYSE-520_SHP099_60min_R1 14 KAASPSPQSVR 11 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 KAAS(0.879)PS(0.12)PQS(0.001)VR;KAAS(0.919)PS(0.065)PQS(0.016)VR;KAAS(0.997)PS(0.003)PQSVR;KAAS(0.766)PS(0.216)PQS(0.018)VR;KAAS(0.631)PS(0.368)PQS(0.001)VR;KAAS(0.818)PS(0.182)PQSVR;KAAS(0.765)PS(0.235)PQSVR;KAAS(0.927)PS(0.073)PQSVR;KAAS(0.811)PS(0.18)PQS(0.009)VR;KAAS(0.629)PS(0.369)PQS(0.002)VR;KAAS(0.975)PS(0.025)PQSVR;KAAS(0.806)PS(0.194)PQSVR;KAAS(0.952)PS(0.023)PQS(0.026)VR;KAAS(0.817)PS(0.183)PQSVR 196.18 4.8621e-09 77215030000.0 23798200.0 22043010.0 21430470.0 17139550.0 18140980.0 19574790.0 17625720.0 18179320.0 25580550.0 20252670.0 True False 22478066.40546444 20984030.71236744 22811912.386164334 18768487.678806372 19568571.91794318 19452616.47471032 19407499.78805022 18116260.182005163 20935766.95318879 20073247.10013882 1.1198022070534364 1.0453730085464013 1.1364335960377119 0.9350000817095793 0.9748583186527828 0.9690817025101928 0.9668340996966058 0.9025077054862677 1.042968626288868 1.0 24.2587706738544 -5.264218399225435 24.998677179585172 0.9661263910791503 1.095019946605127 0.676734654314715 0.041167815955320944 130.89572631715507 1177475.9371077728 0.01076752308716061 0.016774857114828297 5.442289006617126e-06 5.264218399225435 0.1288935555259766 KAASLT(ph)EDRDR ddPTM_KYSE-520_SHP099_60min_R1 7 KAASLTEDRDR 11 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 KAAS(0.086)LT(0.914)EDRDR;KAAS(0.097)LT(0.903)EDRDR;KAAS(0.051)LT(0.949)EDRDR;KAAS(0.074)LT(0.926)EDRDR;KAAS(0.082)LT(0.918)EDRDR;KAAS(0.118)LT(0.882)EDRDR;KAAS(0.145)LT(0.855)EDRDR 137.46 0.00024511 28820070000.0 19145580.0 17359130.0 16701620.0 15184000.0 17111620.0 17651980.0 17959490.0 19846340.0 26154130.0 17849260.0 True False 18083536.51163248 16525171.338214664 17778233.14873683 16627082.794763925 18458207.14220041 17541807.4451505 19775010.516931523 19777497.678710584 21405199.28396389 17691129.44291414 1.0221810071530233 0.9340936310221574 1.0049235808320638 0.9398542274203754 1.0433594532085406 0.9915594988864066 1.1177924270319577 1.1179330151039113 1.2099396679581333 1.0 24.07652282019222 -6.761155170307221 5.639017544860828 1.1222241242762563 0.9871816110110158 0.5214501555215597 0.05692831754683391 0.11855042263098634 12.445128066610506 0.022076266827901904 0.01580264055396471 1.7331846326601663e-07 6.761155170307221 -0.13504251326524053 KAASLTEDRDR ddPTM_KYSE-520_SHP099_60min_R1 3 KAASLTEDRDR 11 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ;; 146.16 4.7751000000000004e-05 2059970000.0 2587220.0 2533750.0 1752730.0 1268900.0 2189800.0 2316940.0 1455210.0 1947600.0 2192910.0 1841860.0 False True 2443701.749104799 2412024.8467637138 1865713.780267155 1389495.8744913028 2362124.80174235 2302479.118034747 1602316.8282809781 1940844.2301732583 1794732.822762495 1825542.5533453946 1.3386167003483966 1.3212646521679607 1.0220050893079127 0.7611413231343114 1.2939302879648809 1.2612574348460643 0.877720886508318 1.0631602241298446 0.983122973207916 1.0 20.79989386766961 -4.758235652280196 22.24886817859388 1.0372936794808933 1.3299413112859526 0.3874210466990756 0.14937348174692006 21.373479650914273 148399.7508210917 0.04026908280136375 0.09726287757755399 1.7448751103219314e-05 4.758235652280196 0.29264763180505926 KAASPS(ph)PQS(ph)VR ddPTM_KYSE-520_SHP099_60min_R1 2 KAASPSPQSVR 11 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KAAS(0.123)PS(0.878)PQS(0.999)VR;KAAS(0.105)PS(0.947)PQS(0.949)VR 181.75 2.1983e-07 5067700000.0 2931700.0 2711300.0 2545400.0 2396950.0 2617300.0 2589400.0 2483500.0 2353920.0 3006800.0 2474000.0 True False 2769072.7568009435 2581045.0782557325 2709480.556783996 2624755.4073307044 2823266.619600083 2573238.59411084 2734556.4166242727 2345754.800929057 2460840.915259756 2452082.2847428727 1.1292739946087538 1.052593175325021 1.1049713028158492 1.0704189756038054 1.1513751545642494 1.0494095610582954 1.1151976561467718 0.9566378810061159 1.0035719154171052 1.0 21.22557596181072 -7.259074001655237 24.99994608577136 0.9850786704449235 1.0941726028930447 0.7005988506381624 0.032761632619184924 104.81811477479759 1107847.2337698273 0.015073767796135819 0.008174278164299513 5.50713849464131e-08 7.259074001655237 0.10909393244812127 KAAVLS(ph)DS(ph)EDEEK ddPTM_KYSE-520_SHP099_60min_R1 5 KAAVLSDSEDEEK 13 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 KAAVLS(1)DS(1)EDEEK;KAAVLS(1)DS(1)EDEEK;KAAVLS(1)DS(1)EDEEK;KAAVLS(1)DS(1)EDEEK;KAAVLS(1)DS(1)EDEEK 177.6 3.3536e-07 2600040000.0 6986520.0 6116370.0 5776630.0 6192730.0 6219870.0 6581790.0 6462060.0 6716930.0 7028000.0 6566120.0 True False 6598963.808317671 5822530.404341461 6149000.8127348 6781285.197287839 6709338.382780712 6540710.607218971 7115308.088428045 6693630.537573249 5751892.36146255 6507949.285164066 1.0139851309783694 0.8946797446032456 0.9448446113052007 1.0420003137926854 1.0309450932685886 1.0050340469200627 1.0933256816626633 1.028531453499872 0.8838256276174323 1.0 22.633771577813505 -5.248345405940349 23.46151540021724 1.0170342874878726 0.9455207988779399 0.18844571239432106 0.056763307394738095 502.64192148101625 900618.2256340705 0.015476237634195075 0.026554812489518225 5.644878440527533e-06 5.248345405940349 -0.07151348860993267 KAAVLS(ph)DS(ph)EDEEKASAK ddPTM_KYSE-520_SHP099_60min_R1 5 KAAVLSDSEDEEKASAK 17 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 KAAVLS(1)DS(0.995)EDEEKAS(0.006)AK;KAAVLS(1)DS(1)EDEEKASAK;KAAVLS(1)DS(1)EDEEKASAK;KAAVLS(1)DS(1)EDEEKASAK;KAAVLS(1)DS(1)EDEEKASAK 204.65 2.7599e-13 5932630000.0 3725560.0 3850650.0 3483240.0 3199510.0 3424890.0 3405810.0 2968960.0 2997130.0 4703040.0 3235130.0 True False 3518895.760080266 3665658.994056517 3707775.22378105 3503590.4684322453 3694409.3580415365 3384553.07646893 3269091.451057296 2986733.6555653973 3849086.4899904425 3206469.265093055 1.097436298045459 1.143207275978719 1.1563420439252041 1.092663044231789 1.152173637920188 1.0555389110741116 1.0195299504804152 0.931471163026638 1.2004127193399865 1.0 21.612554147929682 -6.395046500945409 4.441756464019339 1.0327442173922472 1.1285138521420348 0.3035750171165982 0.06596082692547164 0.2764659437165567 8.736475247328528 0.023039406278406154 0.020050563468286774 4.0267391676102475e-07 6.395046500945409 0.09576963474978761 KAAVT(ph)PGKK ddPTM_KYSE-520_SHP099_60min_R1 2 KAAVTPGKK 9 2 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KAAVT(1)PGKK;KAAVT(1)PGKK 72.958 0.013797 0.0 2632500.0 3958600.0 1489770.0 1626140.0 2652300.0 4065600.0 2035800.0 2282630.0 2303140.0 11339300.0 True False 2486469.9772413527 3768422.9140202566 1585802.957916278 1780687.85668318 2861020.9204773237 4040225.0823422535 2241598.531493332 2274712.0892998446 1884947.8334346698 11238842.623841913 0.22123897099213688 0.33530346852851023 0.14110020141684154 0.15844050106241858 0.25456544025342936 0.35948764633213925 0.19945101168496104 0.20239736113701817 0.16771725492765327 1.0 23.421990138665773 -10.946196714649622 2.6230145588822995 1.557413204632877 0.22852503363725138 0.9195916038869064 0.06860358285942976 13252026.37838394 6979556.094324825 45096697.07096522 0.01803654814228938 1.1318875561246627e-11 10.946196714649622 -1.3288881709956257 KACQIFVR ddPTM_KYSE-520_SHP099_60min_R1 2 KACQIFVR 8 1 A0A087X0X3;P52272-2;P52272;M0R2I7;M0QY96 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 ; 94.806 0.0088104 868350000.0 1002830.0 873160.0 704020.0 612800.0 885970.0 874480.0 664180.0 792290.0 883380.0 778600.0 False True 947201.0208079572 831212.0829601209 749402.255671828 671040.3277549612 955690.7985202629 869022.0459481148 731321.7961721388 789541.730911877 722980.460197607 771702.2097416339 1.2274177899854406 1.0771150742699194 0.9711029024041906 0.8695586448814572 1.2384191550264299 1.126110609737743 0.9476735804825356 1.0231171052059262 0.9368645716845376 1.0 19.55768471129427 -4.33126512839782 3.176378354728875 1.0195797451571267 1.2430061632012912 0.298594310940407 0.09841997763344969 0.39593597021885596 6.4286915002794895 0.02654927171105182 0.1975240255759486 4.663745807119182e-05 4.33126512839782 0.22342641804416452 KADCTITMADSDFLALMTGK ddPTM_KYSE-520_SHP099_60min_R1 1 KADCTITMADSDFLALMTGK 20 1 H0YF61;P22307-6;P22307-2;P22307-4;P22307-7;P22307-8;P22307 H0YF61 SCP2 Non-specific lipid-transfer protein 0 108.96 0.0003677 102730000.0 245730.0 157230.0 121380.0 223690.0 226440.0 159910.0 151690.0 194460.0 166930.0 98258.0 False True 232098.86704938958 149676.43479295867 129204.34901486652 244949.43034514933 244259.53973264113 158911.94237439721 167024.30555173586 193785.46364730495 136619.71996285455 97387.51056356724 2.3832508471185627 1.5369161191902647 1.326703478373971 2.5152037353420673 2.508119761139257 1.6317486857893493 1.7150485168497551 1.989838969349323 1.4028464140037697 1.0 16.571449145662598 -7.951627701168638 2.894388059312182 1.0013646405102037 1.9373867717520945 0.38602850105968256 0.39300524612191595 0.2640865799957991 4.877879455871127 0.3983177754318046 0.10733964343200739 1.1178210890043917e-08 7.951627701168638 0.9360221312418908 KADGYNQPDSK ddPTM_KYSE-520_SHP099_60min_R1 2 KADGYNQPDSK 11 1 B4DT28;O43390-4;O43390-3;O43390;O43390-2;O60506-2;O60506 B4DT28;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 0 ; 159.66 5.3953e-05 1898030000.0 1973500.0 2206600.0 1405590.0 1288340.0 1976590.0 2102870.0 1640250.0 2024930.0 1781190.0 1802940.0 False True 1864026.020925283 2100591.623825873 1496196.5804235162 1410783.446246455 2132136.387741309 2089745.2083099817 1806062.477297348 2017905.9904522153 1457770.7961459118 1786967.3542660943 1.0431225934123662 1.175506434860744 0.837282548476104 0.7894847339423625 1.1931591154428087 1.16943670141542 1.0106857704958443 1.1292349497235037 0.8157791985766952 1.0 20.76908184764951 -7.760518299549136 24.999954510879807 0.9078896223022667 1.0406431244497376 0.1349340429288468 0.1371837792025701 52.90262265985157 1436232.299136244 0.11233812363987021 0.03682374579207005 1.735728124223328e-08 7.760518299549136 0.13275350214747095 KADIDLTK ddPTM_KYSE-520_SHP099_60min_R1 2 KADIDLTK 8 1 P62269 P62269 RPS18 40S ribosomal protein S18 0 ; 105.86 0.004205899999999999 1675090000.0 2683100.0 2214580.0 1668360.0 1475300.0 2096440.0 2309100.0 1587960.0 2089750.0 1900060.0 2105030.0 False True 2534263.0943727577 2108188.252647648 1775905.1550703833 1615512.068434881 2261417.9008880886 2294688.050382846 1748486.4937961248 2082501.1450013146 1555057.000614759 2086381.0718885574 1.214669327918502 1.0104521561535023 0.851189257321465 0.7743130390713076 1.0838949467851005 1.0998412904051764 0.8380475251404692 0.9981403555949007 0.7453369959914118 1.0 20.99257125561605 -4.338866477846078 3.203634605123296 0.9274756746560879 1.233786508652529 0.36182151465141477 0.11648280531557313 0.32143090188166823 5.31926996080405 0.030455740257839554 0.21776058323599126 4.5828276231528464e-05 4.338866477846078 0.3063108339964411 KADPDAAHRPR ddPTM_KYSE-520_SHP099_60min_R1 3 KADPDAAHRPR 11 2 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 0 ;; 77.593 0.009206 280097000.0 519890.0 531020.0 366607.0 328694.0 644160.0 576090.0 398765.0 453820.0 453610.0 389082.0 False True 491050.6653249789 505509.0021227305 390239.0738119394 359932.9789345455 694851.7272309582 572494.4086202646 439076.0577713617 452245.8043423848 371245.8585775508 385635.0361812156 1.2733559434527804 1.3108482235654135 1.0119388468338242 0.9333513430180334 1.8018376496902038 1.4845497812891695 1.1385792694547427 1.1727300735451531 0.9626870583488604 1.0 18.55687660543587 -7.4544636908675095 1.9243778972415073 0.9859275041313735 1.2892241973581353 0.2108894649644798 0.22947873495519125 0.639699114855473 4.277847549342399 0.2096701008131897 0.07171305968221214 3.511852840880152e-08 7.4544636908675095 0.3032966932267618 KADS(ph)DS(ph)EDKGEESKPK ddPTM_KYSE-520_SHP099_60min_R1 9 KADSDSEDKGEESKPK 16 3 P83916;K7ELA4;B5MD17;J3KS05;C9JWS9 P83916 CBX1 Chromobox protein homolog 1 2 KADS(0.998)DS(0.887)EDKGEES(0.115)KPK;KADS(1)DS(1)EDKGEESKPK;KADS(1)DS(1)EDKGEESKPK;KADS(1)DS(0.998)EDKGEES(0.002)KPK;KADS(0.968)DS(0.837)EDKGEES(0.195)KPK;KADS(1)DS(0.999)EDKGEES(0.001)KPK;KADS(1)DS(1)EDKGEESKPK;KADS(1)DS(0.705)EDKGEES(0.295)KPK;KADS(1)DS(0.941)EDKGEES(0.059)KPK 126.02 0.00011741 16861480000.0 14501150.0 12784840.0 11911400.0 11608320.0 12652060.0 12226750.0 11778840.0 12480480.0 14554040.0 11731460.0 True False 13696742.302174158 12170637.095963918 12679227.902913844 12711571.242631325 13647705.141625889 12150438.31796736 12969560.097600404 12437188.127845915 11911393.2134918 11627528.391337778 1.1779581903560772 1.046708869361329 1.0904491028686334 1.093230720649208 1.1737408572395396 1.0449717178948483 1.1154184845734203 1.0696330044750795 1.0244131695576415 1.0 23.471041126756685 -7.719228899207309 1.688862996885078 0.9992901498382396 1.1038716823823793 0.44471927353621 0.04196917983046107 0.3290225945750365 1.7969076140183977 0.03765156886559827 0.01137342133018523 1.9088469167184126e-08 7.719228899207309 0.10458153254413971 KADS(ph)DSEDKGEES(ph)KPK ddPTM_KYSE-520_SHP099_60min_R1 1 KADSDSEDKGEESKPK 16 3 P83916;K7ELA4;B5MD17;J3KS05;C9JWS9 P83916 CBX1 Chromobox protein homolog 1 2 KADS(1)DS(0.447)EDKGEES(0.553)KPK 121.25 0.00020818 2377300000.0 5606300.0 5175700.0 4935200.0 4857600.0 5103300.0 5166600.0 5117900.0 5156800.0 5912900.0 4897300.0 True False 5295307.363118024 4927051.603115919 5253330.888599196 5319264.843509302 5504900.676194971 5134353.332947041 5635267.277890627 5138912.264406162 4839266.412079098 4853913.732041744 1.090935615143414 1.0150678143683058 1.082287650462515 1.0958713189308813 1.1341158867031198 1.0577759755090113 1.1609739251629048 1.058715203462122 0.996982369120828 1.0 22.210717037215456 -7.647185727401871 4.166129537171865 0.9986940534630427 1.0895480627255636 0.4889724963307174 0.03725954107888776 0.1925843840355892 5.785736888507666 0.02958859044901233 0.009894457659465816 2.2532753857658524e-08 7.647185727401871 0.09085400926252085 KADS(ph)DSEDKGEESKPK ddPTM_KYSE-520_SHP099_60min_R1 11 KADSDSEDKGEESKPK 16 3 P83916;K7ELA4;B5MD17;J3KS05;C9JWS9 P83916 CBX1 Chromobox protein homolog 1 1 KADS(0.994)DS(0.005)EDKGEESKPK;KADS(0.996)DS(0.004)EDKGEESKPK;KADS(0.693)DS(0.307)EDKGEESKPK;KADS(1)DSEDKGEESKPK;KADS(0.769)DS(0.231)EDKGEESKPK;KADS(1)DSEDKGEESKPK;KADS(0.69)DS(0.31)EDKGEESKPK;KADS(0.98)DS(0.02)EDKGEESKPK;KADS(0.961)DS(0.039)EDKGEESKPK;KADS(0.886)DS(0.113)EDKGEESKPK;KADS(0.956)DS(0.044)EDKGEESKPK 191.8 2.1203e-12 675733920000.0 48994390.0 41961330.0 41824010.0 40301650.0 42222950.0 39929780.0 41119800.0 43731730.0 49671280.0 35141670.0 True False 46276573.51880498 39945444.72155961 44520052.60538207 44131906.69886706 45545655.949277215 39680563.43182015 45276590.67457483 43580034.83569247 40652227.663071625 34830342.14360556 1.3286281635709059 1.146857660968832 1.278197395300506 1.2670534936725897 1.3076430820430187 1.1392527603724683 1.2999180567305186 1.2512089216928135 1.1671498228602641 1.0 25.053841309012675 -8.108067411326527 2.578832804161611 1.00025082415452 1.2498587565880517 0.6218175275103474 0.06009268092559917 0.2747070265632467 3.878895678035202 0.05482606844065533 0.014828522943906838 7.79709074441293e-09 8.108067411326527 0.24960793243353163 KADSDS(ph)EDKGEESKPK ddPTM_KYSE-520_SHP099_60min_R1 2 KADSDSEDKGEESKPK 16 3 P83916;K7ELA4;B5MD17;J3KS05;C9JWS9 P83916 CBX1 Chromobox protein homolog 1 1 KADS(0.397)DS(0.603)EDKGEESKPK;KADS(0.099)DS(0.901)EDKGEESKPK 202.22 3.6847000000000007e-10 62191000000.0 4314200.0 4159100.0 3944600.0 3975800.0 4149100.0 4147400.0 3822100.0 4227600.0 5154000.0 3630100.0 True False 4074882.7258555135 3959290.593063621 4198875.2275831485 4353658.836632143 4475610.564850305 4121514.5382000864 4208475.168101321 4212935.442329258 4218163.521766923 3597940.1381750666 1.1325599007665426 1.1004325922642606 1.1670219810029652 1.2100420433454986 1.2439369175053612 1.1455205978748122 1.169690157834568 1.170929832219534 1.1723829079342172 1.0 21.77873975283508 -9.280937960465922 8.074579140061436 1.0000000000516944 1.168974261327223 0.6464168414147444 0.03728239525437366 0.0 0.0 0.0400409219014577 0.00971135002040104 5.236752389347988e-10 9.280937960465922 0.1689742612755285 KADSDSEDKGEESKPK ddPTM_KYSE-520_SHP099_60min_R1 1 KADSDSEDKGEESKPK 16 3 P83916;K7ELA4;B5MD17;J3KS05;C9JWS9 P83916 CBX1 Chromobox protein homolog 1 0 86.39 0.0012189 766370000.0 310810.0 331500.0 184570.0 227020.0 257370.0 342030.0 193990.0 291060.0 271030.0 234620.0 False True 293568.74971562607 315574.2424083552 196467.67752244123 248595.91254394845 277623.5547650146 339895.2639004132 213600.4023599528 290050.38079391455 221817.78411030094 232541.44933159766 1.262436226141367 1.357066636143456 0.8448716479885862 1.0690391466058922 1.1938669667837631 1.4616545346104381 0.9185476523600941 1.247306153924889 0.9538849299678825 1.0 17.827128366637766 -9.272239906652434 0.022905448368910196 6.761090174654215e-05 2.1130482670315054 0.09358005523815804 0.18425971095994284 2082.986019702031 12.53953401587071 634.6421842070096 522.6738384160473 5.342691446611966e-10 9.272239906652434 2.112980656129759 KADT(ph)TTPTTSAITASR ddPTM_KYSE-520_SHP099_60min_R1 1 KADTTTPTTSAITASR 16 1 Q15059-2;Q15059 Q15059-2 BRD3 Bromodomain-containing protein 3 1 KADT(0.431)T(0.32)T(0.24)PT(0.006)T(0.002)S(0.001)AITASR 70.414 0.036302 567500000.0 253390.0 301770.0 198810.0 142330.0 169840.0 220150.0 175330.0 226450.0 285170.0 254610.0 True False 239333.95157955826 287272.51623399544 211625.61070724696 155857.00040692522 183205.44174258903 218775.9621895038 193054.06745590226 225664.4978038271 233390.31655069327 252354.3534835823 0.9484042905371509 1.1383695675085108 0.8386049528605217 0.6176116966298542 0.725984866968059 0.8669395204380215 0.7650118366928114 0.8942365950445488 0.9248515562695739 1.0 17.94509144989819 -4.844218392692849 7.145147289772205 0.8118952329026381 1.0420668463945018 0.36614426794335164 0.11120010561541278 0.1999628082295385 14.301735612572903 0.02976328877768043 0.06294188659934012 1.4314678792068205e-05 4.844218392692849 0.23017161349186366 KADTTTPTPTAILAPGS(ph)PAS(ph)PPGSLEPK ddPTM_KYSE-520_SHP099_60min_R1 6 KADTTTPTPTAILAPGSPASPPGSLEPK 28 1 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2;H0YDJ7;U3KPW0;E9PIQ3;U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2 H0Y6K2 BRD2 Bromodomain-containing protein 2 2 KADTTTPTPTAILAPGS(1)PAS(0.971)PPGS(0.03)LEPK;KADTTTPTPTAILAPGS(1)PAS(0.991)PPGS(0.009)LEPK;KADTTTPTPTAILAPGS(1)PAS(0.998)PPGS(0.002)LEPK;KADTTTPTPTAILAPGS(0.999)PAS(0.988)PPGS(0.012)LEPK;KADTTTPTPTAILAPGS(1)PAS(0.989)PPGS(0.011)LEPK;KADTTTPTPTAILAPGS(1)PAS(0.998)PPGS(0.002)LEPK 133.46 9.820900000000001e-06 8418420000.0 3462370.0 2981700.0 2870680.0 2831160.0 3079890.0 2912930.0 2937640.0 2914180.0 3672840.0 2859870.0 True False 3270305.43403652 2838454.6563770524 3055728.6260503978 3100232.5951807094 3322259.8208230175 2894749.3233734807 3234605.3198035564 2904071.389754723 3005944.840761823 2834533.7767451946 1.153736625354914 1.0013832538049203 1.0780357077131726 1.093736338799465 1.1720657019786385 1.0212435452779927 1.141141921236074 1.0245322929576715 1.0604724012897297 1.0 21.434680029962358 -7.825958239355513 1.1943740961109461 1.0042219923121178 1.0900901801418188 0.2189508496271776 0.05379183721307288 0.6935199411700594 2.11899675280873 0.048945758652538106 0.01575679648823302 1.492937959765688e-08 7.825958239355513 0.08586818782970096 KADTTTPTPTAILAPGSPAS(ph)PPGSLEPK ddPTM_KYSE-520_SHP099_60min_R1 2 KADTTTPTPTAILAPGSPASPPGSLEPK 28 1 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2;H0YDJ7;U3KPW0;E9PIQ3;U3KQA6;A0A0G2JHL0;A0A140T9F7;A0A140T9V2 H0Y6K2 BRD2 Bromodomain-containing protein 2 1 KADTTTPTPTAILAPGS(0.011)PAS(0.966)PPGS(0.023)LEPK;KADTTTPTPTAILAPGS(0.001)PAS(0.979)PPGS(0.02)LEPK 125.86 0.00010443 569730000.0 633590.0 748150.0 561550.0 510700.0 589160.0 714570.0 576120.0 675980.0 807500.0 732880.0 True False 598443.4996696487 712207.7510039549 597748.4115117678 559236.7744524461 635523.540138151 710110.1035737165 634359.8319893595 673635.1831549185 660878.3554184699 726387.2533720115 0.8238628870365959 0.9804794174151145 0.822905975754557 0.7698879239088726 0.8749100940138255 0.9775916362481119 0.8733080447716486 0.9273774836050481 0.9098154632402505 1.0 19.470379360906037 -6.015640391940616 24.30519095694196 0.9287480742006933 0.8524745078815269 0.32710581443431985 0.05982906758395228 698.8407839158386 1085999.7411793272 0.01991951800214564 0.020536701169365207 9.646274317004938e-07 6.015640391940616 -0.07627356631916637 KADVSEQVSNGPVESVTLENS(ph)PLVWK ddPTM_KYSE-520_SHP099_60min_R1 1 KADVSEQVSNGPVESVTLENSPLVWK 26 1 F5GYK2;Q9NRL3-2;Q9NRL3;Q9NRL3-3;M0QXN2;M0R2A7;M0QYS2;M0R0P4;M0R0W8 F5GYK2 STRN4 Striatin-4 1 KADVSEQVSNGPVES(0.074)VT(0.225)LENS(0.701)PLVWK 53.705 0.045351 365760000.0 657350.0 676350.0 774470.0 694650.0 691460.0 691730.0 616780.0 674010.0 887480.0 737480.0 True False 620885.485105263 643857.1307779526 824393.5753958139 760669.3271458623 745873.9681307735 687412.6564857854 679130.1415927199 671672.0166251172 726336.003550196 730946.5009507576 0.8494267149478983 0.8808539748674821 1.1278439315647693 1.0406634769527503 1.020422106351969 0.9404418183706375 0.9291105993521563 0.918907219271806 0.9936924283862572 1.0 19.4794062915071 -4.549949903537326 24.934513920283614 0.9923829673421446 0.8572833707031666 0.45269094142632116 0.05804161931724806 175.38637993707772 161543.12643502705 0.016479375300141298 0.04360245246565209 2.8187080543429256e-05 4.549949903537326 -0.13509959663897797 KADYQAVDDEIEANLEEFDISEDDIDDGFRR ddPTM_KYSE-520_SHP099_60min_R1 3 KADYQAVDDEIEANLEEFDISEDDIDDGFRR 31 2 P17655-2;P17655 P17655-2 CAPN2 Calpain-2 catalytic subunit 0 ;; 270.39 1.1257999999999999e-41 159047000.0 118857.0 113357.0 88353.0 109476.0 111764.0 89878.0 78145.0 80437.0 100950.0 74486.0 False True 112263.76527444458 107911.15956767413 94048.37574979835 119880.5661248404 120559.19094982755 89317.03806344875 86044.65922170482 80157.98282113693 82620.02474240797 73826.11198923113 1.5206511930469844 1.4616936563504106 1.273917496339466 1.6238233721738882 1.6330155781116211 1.2098299051218797 1.1655044116945503 1.0857673614564645 1.1191165634519613 1.0 16.17184356134237 -6.437411841420505 4.264934413604808 1.1080455273101257 1.4933003222164256 0.7866009092302895 0.10175902522921869 0.11743640065966215 3.8479921673170168 0.04025859519206082 0.034551554960379406 3.652482624358827e-07 6.437411841420505 0.3852547949062999 KAEAAAAPTVAPGPAQPGHVS(ph)PT(ph)PATTSPGEK ddPTM_KYSE-520_SHP099_60min_R1 1 KAEAAAAPTVAPGPAQPGHVSPTPATTSPGEK 32 1 Q9Y6R0;A0A0C4DGH3;M0QYC2 Q9Y6R0 NUMBL Numb-like protein 2 KAEAAAAPTVAPGPAQPGHVS(0.873)PT(0.74)PAT(0.115)T(0.11)S(0.162)PGEK 131.56 2.1213000000000002e-05 506650000.0 258340.0 230690.0 201360.0 256610.0 220650.0 214040.0 256340.0 273450.0 235560.0 275710.0 True False 244009.36521197774 219607.30612725046 214339.98778739152 280998.1372473904 238013.8996732349 212704.09696589332 282253.34883731266 272501.4657737098 192788.24198436513 273267.4238991344 0.8929325044687505 0.8036351460915795 0.7843598213393576 1.0282899192225323 0.8709925840303896 0.7783734114037846 1.0328832643494859 0.9971970382912992 0.7054929535088863 1.0 18.059953961446382 -10.713574367474553 0.015658697352445124 1.9301096295652111 6.2758065349246435e-06 0.0720049054090417 0.10925120052750813 7226.973379884084 17.044671622176953 1180.120952358019 931.3860683899841 1.9338626805735826e-11 10.713574367474553 -1.9301033537586763 KAEAAAAPTVAPGPAQPGHVS(ph)PTPATTSPGEK ddPTM_KYSE-520_SHP099_60min_R1 5 KAEAAAAPTVAPGPAQPGHVSPTPATTSPGEK 32 1 Q9Y6R0;A0A0C4DGH3;M0QYC2 Q9Y6R0 NUMBL Numb-like protein 1 KAEAAAAPTVAPGPAQPGHVS(0.723)PT(0.052)PAT(0.167)T(0.046)S(0.013)PGEK;KAEAAAAPTVAPGPAQPGHVS(0.775)PT(0.07)PAT(0.097)T(0.049)S(0.009)PGEK;KAEAAAAPTVAPGPAQPGHVS(0.5)PT(0.5)PATTSPGEK;KAEAAAAPTVAPGPAQPGHVS(0.929)PT(0.043)PAT(0.013)T(0.013)S(0.003)PGEK;KAEAAAAPTVAPGPAQPGHVS(0.82)PT(0.044)PAT(0.077)T(0.048)S(0.011)PGEK 206.2 1.4021e-16 11490430000.0 5317490.0 5488250.0 3930810.0 3969560.0 4023240.0 5795780.0 4606150.0 6113780.0 6291380.0 6608380.0 True False 5022518.2295464855 5224586.231968806 4184196.302118374 4346825.788908265 4339846.098895743 5759606.387184571 5071784.593691918 6092572.724146981 5149023.984783473 6549834.894441837 0.7668160053635205 0.7976668597253296 0.638824698568977 0.6636542537273669 0.6625886253374902 0.8793513851886784 0.7743377772767698 0.9301872218667852 0.7861303479806665 1.0 22.6430271095663 -6.26733453580139 24.77745767341694 0.8634090822502176 0.7049331731072377 0.5489578088181564 0.07587662573475334 360.5005062901821 1515185.7215826767 0.026344561665905677 0.023850950444961883 5.403379418213005e-07 6.26733453580139 -0.15847590914297993 KAEAGAGS(ph)ATEFQFR ddPTM_KYSE-520_SHP099_60min_R1 2 KAEAGAGSATEFQFR 15 1 P46783;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 KAEAGAGS(0.989)AT(0.011)EFQFR;KAEAGAGS(0.962)AT(0.038)EFQFR 178.4 7.6388e-09 3065900000.0 955820.0 985480.0 893600.0 803500.0 884660.0 791480.0 653740.0 733820.0 997110.0 787760.0 True False 902798.7592200692 938136.0615643628 951202.8858105526 879864.3984189152 954277.7089731426 786540.0797354004 719826.4190875585 731274.5496948764 816059.9590975984 780781.0592680054 1.1562764599674809 1.201535373365589 1.218270953834767 1.1269028468029207 1.2222090913268222 1.007375973583163 0.9219312002296869 0.9365936084316105 1.0451841132809594 1.0 19.574558529858667 -6.3460860756109225 4.785739002323101 0.970499342338477 1.1844188862774052 0.855438413994215 0.04172597052432919 0.07791631024859343 3.1272629615334324 0.01483681566400797 0.013060241759374546 4.5072736313904917e-07 6.3460860756109225 0.2139195439389282 KAEAQIAAK ddPTM_KYSE-520_SHP099_60min_R1 2 KAEAQIAAK 9 1 P00505 P00505 GOT2 Aspartate aminotransferase, mitochondrial 0 ; 125.74 0.0016125 5789300000.0 9833600.0 10897100.0 4810000.0 2839700.0 4821400.0 9785900.0 7430800.0 8794300.0 7213100.0 5504300.0 False True 9288110.605204398 10373586.95911943 5120060.296272107 3109584.2342130668 5200816.749986564 9724822.568204716 8181977.7816193355 8763794.625905061 5903382.86745383 5455536.184280595 1.7025110440962445 1.9014789030287338 0.9385072563582079 0.5699869140585891 0.9533099175424825 1.7825603643186356 1.4997568534500094 1.6064039041949305 1.0820903148738426 1.0 22.379289564660976 -6.246343595355423 24.80562529740129 1.4386622306210117 1.2004086566887067 0.03929793040469587 0.41718005077215914 2458.088474292611 4039170.857000097 0.1528416021599664 0.1522544672296439 5.67095765787589e-07 6.246343595355423 -0.23825357393230506 KAEDS(ph)DS(ph)EPEPEDNVR ddPTM_KYSE-520_SHP099_60min_R1 11 KAEDSDSEPEPEDNVR 16 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 2 KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR;KAEDS(1)DS(1)EPEPEDNVR 212.37 9.4082e-18 33552900000.0 27552970.0 24786430.0 23716620.0 22687500.0 23387610.0 23654740.0 23689660.0 24523100.0 28644520.0 24225270.0 True False 26024551.82861605 23595652.697610088 25245431.27313367 24843713.178754397 25228081.849701975 23507101.99337971 26084442.021601528 24438035.08983455 23443397.237586934 24010652.95477489 1.0838752231201052 0.9827159945234945 1.051426269859655 1.034695442291745 1.050703697946914 0.9790280188404854 1.0863695406673326 1.0177996881577793 0.9763748316942314 1.0 24.517171301507762 -7.549363242531193 7.805886575364543 0.9907069265684966 1.0360239980665926 0.25295538797503847 0.03415014599500348 0.2888636084540237 66.62143413321093 0.021387386174031957 0.008154988205784535 2.822518242049097e-08 7.549363242531193 0.04531707149809605 KAEELDRR ddPTM_KYSE-520_SHP099_60min_R1 4 KAEELDRR 8 2 O14828-2;O14828 O14828-2 SCAMP3 Secretory carrier-associated membrane protein 3 0 ;;; 159.79 0.00015196 3985120000.0 6704500.0 7092300.0 4639900.0 4535610.0 7286600.0 7683300.0 5509800.0 6750000.0 6770400.0 5302800.0 False True 6332588.0199106075 6751575.262240657 4938995.378102488 4966673.010719133 7860013.964917255 7635345.674724574 6066784.3544660425 6726585.82546185 5541066.027894988 5255821.317515977 1.2048712536718307 1.2845899535701126 0.9397190428910493 0.9449851337538426 1.495487287347904 1.4527407256556462 1.154298060751682 1.2798353328801881 1.054272147614376 1.0 22.32548479842515 -2.7460906714213915 1.7631772592475372 1.191499157539548 5.973348748186148 0.0 0.1892257013152736 4945.526602353376 116.65503945369842 0.05484748699417065 93874.91329387139 0.001794358963857193 2.7460906714213915 4.7818495906466 KAEGEPQEES(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 13 KAEGEPQEESPLK 13 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK;KAEGEPQEES(1)PLK 277.18 9.844499999999999e-23 98540500000.0 75712030.0 63429300.0 58556990.0 62915430.0 61933290.0 67253400.0 65956070.0 71374860.0 73384170.0 66311990.0 True False 71512132.76771009 60382061.21867967 62331667.26989666 68894893.55098619 66807087.57078343 66833646.58421803 72623553.22481158 71127277.2696776 60059454.59238322 65724517.358547606 1.0880586977548918 0.9187144104729871 0.9483777100995371 1.0482373445991728 1.0164713299654993 1.016875425948277 1.1049689848405824 1.0822031127540468 0.9138059434463442 1.0 25.9699283068063 -5.270746750360434 24.597318627602707 1.0320085536368955 0.9784166859893841 0.07305363972761647 0.06329374984443137 1068.8259847540198 2824670.903294757 0.01771310242456043 0.026703260471209127 5.36109187112979e-06 5.270746750360434 -0.05359186764751134 KAEGEPQEES(ph)PLKSK ddPTM_KYSE-520_SHP099_60min_R1 12 KAEGEPQEESPLKSK 15 2 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 KAEGEPQEES(0.999)PLKS(0.001)K;KAEGEPQEES(1)PLKSK;KAEGEPQEES(0.996)PLKS(0.004)K;KAEGEPQEES(1)PLKSK;KAEGEPQEES(1)PLKSK;KAEGEPQEES(0.953)PLKS(0.047)K;KAEGEPQEES(1)PLKSK;KAEGEPQEES(1)PLKSK;KAEGEPQEES(0.964)PLKS(0.036)K;KAEGEPQEES(1)PLKSK;KAEGEPQEES(1)PLKSK;KAEGEPQEES(1)PLKSK 242.22 6.328699999999999e-19 211457500000.0 37256940.0 35973020.0 36953290.0 28606770.0 31134040.0 29654300.0 27171840.0 27511890.0 42095200.0 27749020.0 True False 35190223.26833144 34244822.122596145 39335358.2007545 31325548.819860987 33584111.81954443 29469216.513995934 29918634.758803323 27416457.67491343 34451772.813636616 27503185.271210883 1.2794962809332127 1.245122038953143 1.4302110033025526 1.1389789404738944 1.2210989922937685 1.0714837653674611 1.0878243542983665 0.9968466344737081 1.252646647066702 1.0 24.713095377716606 -5.788704492139093 1.4260288939724044 1.0826468167968992 1.305178230287842 0.5211800212484747 0.09049466971072054 0.31930341469419443 1.3552928694984423 0.033391309479060854 0.04520346603444717 1.6266552075238622e-06 5.788704492139093 0.22253141349094285 KAEPSEVDMNS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 23 KAEPSEVDMNSPK 13 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPS(0.002)EVDMNS(0.998)PK;KAEPSEVDMNS(1)PK;KAEPS(0.066)EVDMNS(0.934)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK;KAEPSEVDMNS(1)PK 181.87 4.8463e-08 130525030000.0 75792020.0 69291260.0 67978560.0 63063340.0 65633100.0 65072550.0 65985840.0 66823160.0 73706760.0 71071630.0 True False 71587685.56295401 65962403.8612983 72360566.74714169 69056860.87291552 70798051.56874415 64666408.078013256 72656332.66693872 66591366.05460276 60323470.38021523 70441990.6510915 1.0162643744345228 0.9364074361273919 1.0272362560784682 0.9803365895061553 1.005054668591299 0.9180093787853687 1.0314349721718563 0.9453362325383251 0.8563566960934615 1.0 26.069932343708288 -7.515564436456212 24.895723570931025 0.9190677192205438 0.9852873797791388 0.2118482328636514 0.04760506647253738 422.46053009259464 1437957.7843736748 0.027391778226173783 0.011270916862361416 3.050953324321003e-08 7.515564436456212 0.06621966055859507 KAEPYET(ph)SQGK ddPTM_KYSE-520_SHP099_60min_R1 1 KAEPYETSQGK 11 1 Q86UE8-2;Q86UE8;J3KST4;J3KRK0;Q86UE8-3 Q86UE8-2 TLK2 Serine/threonine-protein kinase tousled-like 2 1 KAEPYET(0.5)S(0.5)QGK 69.258 0.045363 321010000.0 182650.0 129420.0 136690.0 104600.0 148890.0 156240.0 132660.0 127560.0 127650.0 105540.0 True False 172518.04039625192 123202.46893661957 145501.2561117327 114541.15255086335 160606.79593178307 155264.84820571452 146070.5674368334 127117.52413272782 104471.9777946348 104604.99770887758 1.649233250560176 1.1777875974864982 1.3909589340718886 1.0949873816702211 1.5353644610629609 1.4842966550969825 1.3964014209278717 1.2152146352175643 0.9987283598570216 1.0 16.674592255252744 -7.579559860889532 2.6681685395896495 0.9921956536496341 1.3789909006200638 0.511543807316238 0.1520780449336778 0.23816517108401572 3.208842561094905 0.12633294468816209 0.04071691029106844 2.6329350086145788e-08 7.579559860889532 0.38679524697042966 KAEPYETSQGKGT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 KAEPYETSQGKGTPR 15 2 Q86UE8-2;Q86UE8;J3KST4;J3KRK0;Q86UE8-3 Q86UE8-2 TLK2 Serine/threonine-protein kinase tousled-like 2 1 KAEPYETSQGKGT(1)PR 110.44 0.00046833 595510000.0 1084100.0 1145800.0 1097900.0 975880.0 935710.0 1003400.0 944010.0 942540.0 1238600.0 1002900.0 True False 1023962.8119002277 1090754.048119137 1168672.3907021107 1068627.3417909802 1009345.0535383769 997137.4084076686 1039439.7434497599 939270.5487304897 1013701.4625650977 994015.0862443921 1.0301280393731092 1.097321422193144 1.1757089071128812 1.075061492103193 1.015422268239313 1.0031411215045773 1.0456981567322003 0.9449258484388408 1.0198049069809243 1.0 19.922908222285546 -5.7125667502101445 3.5149687411208257 1.0029613955019019 1.1038255702158863 0.5479553316977668 0.04037766887355582 0.1760316974036188 4.450920224404703 0.012854195365810972 0.01639776982156431 1.93835469174139e-06 5.7125667502101445 0.10086417471398446 KAEQGS(ph)EEEGEGEEEEEEGGESK ddPTM_KYSE-520_SHP099_60min_R1 11 KAEQGSEEEGEGEEEEEEGGESK 23 1 Q5STZ8;Q8NE71 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK;KAEQGS(1)EEEGEGEEEEEEGGESK 313.12 7.979599999999999e-61 43505360000.0 16791670.0 15891050.0 13972370.0 15167090.0 14596600.0 13425530.0 15249210.0 16592320.0 16806870.0 15922620.0 True False 15860202.59173575 15127620.10504765 14873051.326782452 16608565.673448114 15745269.376706744 13341736.287322514 16790748.964747746 16534765.114596616 13755166.074714584 15781557.974410927 1.0049833240452142 0.9585631614810397 0.942432385376553 1.0524034255919563 0.9977005693757851 0.8454004546924662 1.0639474880726716 1.0477270457965544 0.8715974745343873 1.0 23.911736301185588 -10.192508545368643 4.065629664141835 1.0000113021396018 0.9783070740361229 0.009419240626518555 0.07032733163691231 7.100776438624281e-06 1.4102739447539891e-06 0.06708152513168486 0.016261183584185095 6.419355903776348e-11 10.192508545368643 -0.02170422810347883 KAESGWFHVEEDR ddPTM_KYSE-520_SHP099_60min_R1 3 KAESGWFHVEEDR 13 1 O43719;Q5H919;Q5H918 O43719 HTATSF1 HIV Tat-specific factor 1 0 ;; 160.27 2.2612e-06 1731410000.0 2276500.0 2312340.0 1496040.0 1925100.0 2413130.0 2342090.0 1797380.0 1922460.0 1887030.0 1755450.0 False True 2150218.0069097592 2201251.715506898 1592477.1321486335 2108060.9251975813 2603029.6021684697 2327472.147555824 1979076.7111383681 1915791.4349655386 1544392.9201551876 1739898.0787194332 1.2358298645242036 1.2651613002107696 0.9152703549857922 1.2116002373823622 1.4960816578890082 1.337706027739766 1.1374670363421349 1.1010940574033872 0.8876341315876747 1.0 20.730571366413862 -7.39504791030964 2.135104843476913 0.9508813630587057 1.2362561890830128 0.39521144219048887 0.14076692997423537 0.38396736176686325 3.2287031921103457 0.12048995132783899 0.044048243943775656 4.026726100133738e-08 7.39504791030964 0.2853748260243071 KAFEEAEK ddPTM_KYSE-520_SHP099_60min_R1 2 KAFEEAEK 8 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 78.655 0.031183999999999996 3690100000.0 2457700.0 2308100.0 1709070.0 1453180.0 2108950.0 2172700.0 1633640.0 2048730.0 2117370.0 2076900.0 False True 2321366.4816965153 2197215.411471269 1819239.3868086836 1591289.790285503 2274912.366715926 2159139.373377856 1798784.2739899647 2041623.4338071763 1732908.9825540625 2058500.2818037486 1.1276979178562132 1.067386500207798 0.8837693163756023 0.7730335547445953 1.1051309474305964 1.048889520425969 0.8738324157108158 0.9918013865988962 0.8418308211430563 1.0 20.97316221548486 -4.61100465801063 5.129747378826664 0.9414199648789882 1.1139307252292039 0.31201895867269636 0.09533262683717036 0.2328947150513195 9.96723903520929 0.025356689498668133 0.0716638061554163 2.4490369746414683e-05 4.61100465801063 0.17251076035021573 KAGAVT(ph)STPNR ddPTM_KYSE-520_SHP099_60min_R1 1 KAGAVTSTPNR 11 1 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 KAGAVT(0.424)S(0.288)T(0.288)PNR 72.089 0.038367 405810000.0 421350.0 388260.0 366810.0 378780.0 344080.0 315390.0 343500.0 363970.0 413880.0 382110.0 True False 397976.8755595989 369607.4068098582 390455.15951675095 414779.1373156399 371157.13845260255 313421.53402202 378224.332236939 362707.4730212369 338729.8250657537 378724.8026770817 1.0508339373244915 0.9759260660966074 1.0309732997594854 1.0951992961213575 0.9800180390326014 0.8275706576557588 0.9986785379869365 0.9577072070732533 0.8943956737752147 1.0 18.53079038081229 -5.997557848485236 24.985317092469455 0.9332794810810485 1.0338071710322798 0.4415682803596477 0.05424835558338349 73.49558884947713 751908.2405012317 0.016714253040601913 0.018835696140187506 1.0056391018859503e-06 5.997557848485236 0.10052768995123129 KAGEIWK ddPTM_KYSE-520_SHP099_60min_R1 2 KAGEIWK 7 1 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 0 ; 114.28 0.0068634 3265600000.0 4494200.0 3751800.0 2627000.0 2358100.0 3506100.0 3837600.0 2671000.0 3282800.0 3082400.0 3332700.0 False True 4244897.767034416 3571557.896433391 2796340.6233486147 2582213.1150113856 3782010.12301985 3813648.1149145565 2941010.746447929 3271412.7330112825 2522713.8609806686 3303174.870801362 1.2850962885911603 1.0812500203983806 0.8465614848511523 0.7817367278484204 1.1449621261202925 1.1545401815161398 0.8903587795018643 0.9903843607945667 0.7637239806104026 1.0 21.65542191756093 -4.414095207312666 3.351586015451052 0.952950505778203 1.2855954529632785 0.39889400433361966 0.12775540912076072 0.28838506715887186 5.398389611373177 0.03464176987462998 0.1921960653034687 3.8539386122944305e-05 4.414095207312666 0.33264494718507553 KAGLAS(ph)PEEEDAVGKEPLK ddPTM_KYSE-520_SHP099_60min_R1 4 KAGLASPEEEDAVGKEPLK 19 2 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 KAGLAS(1)PEEEDAVGKEPLK;KAGLAS(1)PEEEDAVGKEPLK;KAGLAS(1)PEEEDAVGKEPLK;KAGLAS(1)PEEEDAVGKEPLK 215.28 8.2881e-19 3532940000.0 3540590.0 3420210.0 3212820.0 3004200.0 3100280.0 3382600.0 2969290.0 3152660.0 3745910.0 3401090.0 True False 3344186.41470882 3255897.9777601296 3419923.5178937567 3289718.2647543354 3344254.3978197887 3361487.938688243 3269454.810677783 3141724.158296374 3065747.170706622 3370958.9886079803 0.9920578761148869 0.9658669799197513 1.014525400472462 0.9758998183815957 0.9920780434059154 0.9971903989482682 0.9698886345775115 0.9319971464837467 0.9094584600605319 1.0 21.68472764479468 -7.052409169551014 3.9250687705265523 0.9410876880424944 0.9889781176945308 0.3676352373248917 0.024532671048397556 0.21056720679874183 6.601772742090763 0.011426337346134498 0.006557435101241652 8.863205736489642e-08 7.052409169551014 0.04789042965203638 KAGS(ph)DGDIMDSSTEAPPISIK ddPTM_KYSE-520_SHP099_60min_R1 6 KAGSDGDIMDSSTEAPPISIK 21 1 Q6F5E8-2;Q6F5E8 Q6F5E8-2 RLTPR Leucine-rich repeat-containing protein 16C 1 KAGS(1)DGDIMDSSTEAPPISIK;KAGS(0.997)DGDIMDS(0.001)S(0.001)TEAPPISIK;KAGS(1)DGDIMDSSTEAPPISIK;KAGS(1)DGDIMDSSTEAPPISIK;KAGS(1)DGDIMDSSTEAPPISIK;KAGS(1)DGDIMDSSTEAPPISIK 182.4 1.27e-10 4651140000.0 5138240.0 4724820.0 4633100.0 4280340.0 4786700.0 4767080.0 4383900.0 4649080.0 5748050.0 4506520.0 True False 4853211.584372502 4497832.55510059 4931757.039222102 4687142.226668849 5163386.057402557 4737326.885461459 4827067.39474095 4632953.426583434 4704349.016548771 4466595.738819506 1.0865571607909106 1.0069934281290789 1.1041422433554586 1.049376863442679 1.156000309705039 1.0606124132275971 1.0807038910614988 1.0372448498793168 1.0532291910062366 1.0 22.090744254904962 -7.959174530107275 1.0211707941714134 1.0021888768526037 1.0773479230790153 0.2842612845280226 0.037131769225601984 0.7145410508244747 1.6805495581050525 0.03493202375094323 0.011676666942124093 1.0985642702233744e-08 7.959174530107275 0.07515904622641156 KAGSEPETSRPSPLGSYS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 1 KAGSEPETSRPSPLGSYSPIR 21 2 Q8N2Y8 Q8N2Y8 RUSC2 Iporin 1 KAGSEPETSRPS(0.002)PLGS(0.019)YS(0.979)PIR 92.822 0.0014611 910200000.0 428840.0 413100.0 421620.0 358340.0 397220.0 402600.0 292380.0 380880.0 503750.0 332720.0 True False 405051.3903286542 393254.0559242584 448798.29981585196 392396.5258611505 428478.95412736165 400087.2240631122 321936.62375381694 379558.81617806066 412281.6985040921 329772.35965224274 1.2282757437760885 1.1925015678662685 1.360933646134341 1.1899011981323944 1.2993173672263154 1.2132224316344133 0.9762389549364026 1.1509721936014274 1.2502008929397799 1.0 18.33111095670598 -6.540155513693124 24.84233466322028 1.1051906379995533 1.2534332501841912 0.4394115403644686 0.08535871997783546 227.8574808998274 327634.16438280983 0.03213482483910746 0.024897165410983534 2.8829989638772367e-07 6.540155513693124 0.14824261218463786 KAGTAT(ph)SPAGSSPAVAGGTQR ddPTM_KYSE-520_SHP099_60min_R1 1 KAGTATSPAGSSPAVAGGTQR 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KAGT(0.029)AT(0.647)S(0.324)PAGSSPAVAGGTQR 96.287 7.2363e-05 0.0 117470.0 104040.0 99627.0 76217.0 72170.0 144410.0 94000.0 99351.0 139460.0 148860.0 True False 110953.70492936057 99041.76223277612 106049.11582883613 83460.64076452341 77849.36840887091 143508.68362383023 103502.43735159312 99006.3745696977 114137.57950050743 147541.21621132753 0.7520183700427031 0.6712819968280305 0.718776207435751 0.5656767844788559 0.5276448873605937 0.9726684333296983 0.7015154138579393 0.6710421474897429 0.7735979303371397 1.0 17.170758507673213 -6.2473249882784465 24.982918189996887 0.795564346377111 0.6478849953959231 0.35320873872477454 0.1164585524798106 1108.7865552235446 1962588.0507473224 0.03920329539380322 0.039019217683257085 5.658157232232316e-07 6.2473249882784465 -0.1476793509811879 KAGTQIENIDEDFRDGLK ddPTM_KYSE-520_SHP099_60min_R1 6 KAGTQIENIDEDFRDGLK 18 2 O43707;F5GXS2;O43707-3;K7EP19 O43707 ACTN4 Alpha-actinin-4 0 ;;;;; 206.64 7.086699999999999e-14 4392370000.0 5735260.0 5486900.0 3908700.0 3189010.0 5326120.0 4970850.0 3534580.0 4344230.0 4527600.0 4296950.0 False True 5417113.694842638 5223301.087995198 4160661.056141125 3492092.5515891835 5745255.342522598 4939825.081306819 3891889.8405765295 4329160.880080903 3705501.971507943 4258882.365976516 1.2719566377599518 1.2264487814275542 0.9769373038757623 0.8199551552508034 1.349005407714583 1.1598876552144848 0.9138289124086104 1.0165016330729935 0.8700644096466634 1.0 22.022043451274865 -4.704784107974154 6.070295682684994 1.020727341126038 1.2559114803298528 0.3028090042529801 0.14306808791262182 0.26042988258054617 19.48756060981842 0.03870328100375086 0.10358301258357787 1.9734034904597107e-05 4.704784107974154 0.23518413920381476 KAGTQIENIEEDFRDGLK ddPTM_KYSE-520_SHP099_60min_R1 2 KAGTQIENIEEDFRDGLK 18 2 P12814-3;P12814;P12814-2;P12814-4;G3V2N5;G3V5M4;G3V380 P12814-3 ACTN1 Alpha-actinin-1 0 ; 201.12 4.3343e-13 242663000.0 451590.0 399400.0 278690.0 244870.0 366520.0 346500.0 252630.0 279900.0 331220.0 275630.0 False True 426539.40247765306 380212.2244883777 296654.80331976584 268142.3711771501 395363.0387864679 344337.36497235077 278168.30583120213 278929.0922291513 271078.79737672495 273188.1326368954 1.5613394270115772 1.3917596669315502 1.085899304835693 0.9815300854724469 1.4472189365266455 1.260440421217061 1.0182298299206358 1.0210146741618766 0.992278818117718 1.0 18.059535288380467 -1.0000000000000002 0.5101849371601864 1.075212043479196 17.95714052246055 0.5243749376179346 0.14388979901811685 102.00597715464617 1.055793724749643 0.08530561642005065 1854.4408820438114 0.09999999999999995 1.0000000000000002 16.88192847898135 KALEIS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 KALEISPR 8 1 Q8IY92-2;Q8IY92 Q8IY92-2 SLX4 Structure-specific endonuclease subunit SLX4 1 KALEIS(1)PR;KALEIS(1)PR;KALEIS(1)PR 88.18700000000001 0.0030834 2197290000.0 4473100.0 3962200.0 4045400.0 3684000.0 4048600.0 3643300.0 3705100.0 3958600.0 4703700.0 4258700.0 True False 4224968.22609622 3771849.9646165473 4306172.956868857 4034126.252365009 4367201.78661708 3620560.813286481 4079647.666291355 3944868.5405441816 3849626.6506276815 4220971.231218463 1.0009469372470952 0.8935976480293925 1.020185336734882 0.955734126432433 1.0346438171189347 0.8577553873167095 0.9665187092767008 0.9345878766876649 0.9120239015503582 1.0 22.009143565708168 -6.247887958300809 24.99726716027221 0.9321102573961425 0.9769355881235362 0.17768727083592073 0.04990315567036762 1465.614815921542 2703507.4248989793 0.01570663010031069 0.015618479589876685 5.650827391881461e-07 6.247887958300809 0.0448253307273937 KALPASET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KALPASETPK 10 1 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KALPAS(0.01)ET(0.99)PK;KALPASET(1)PK 137.95 0.00031039999999999996 4314700000.0 8496800.0 8482400.0 7601500.0 5764500.0 6171900.0 7459800.0 6731600.0 7794500.0 8802100.0 8120500.0 True False 8025465.566049124 8074892.7716580285 8091504.852830021 6312356.346839877 6657593.4166926835 7413240.621127689 7412095.822084935 7767462.698749972 7203860.522884095 8048558.687653406 0.997130775521373 1.0032719006006652 1.0053358827143168 0.7842840677204869 0.8271783402543263 0.9210643680215312 0.9209221314935788 0.9650749904657291 0.8950497601433797 1.0 22.94029902207344 KALVVPEPEPDSDS(ph)NQER ddPTM_KYSE-520_SHP099_60min_R1 9 KALVVPEPEPDSDSNQER 18 1 Q5VTR2;C9J0A5;C9JXC9 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A 1 KALVVPEPEPDS(0.146)DS(0.854)NQER;KALVVPEPEPDS(0.01)DS(0.99)NQER;KALVVPEPEPDS(0.049)DS(0.951)NQER;KALVVPEPEPDS(0.047)DS(0.953)NQER;KALVVPEPEPDS(0.02)DS(0.98)NQER;KALVVPEPEPDS(0.003)DS(0.997)NQER;KALVVPEPEPDS(0.027)DS(0.973)NQER;KALVVPEPEPDS(0.028)DS(0.972)NQER;KALVVPEPEPDS(0.027)DS(0.973)NQER 203.64 2.8588e-14 22808870000.0 12306950.0 12550490.0 12259900.0 10759910.0 11240860.0 10135430.0 9100760.0 10591030.0 14337810.0 10575550.0 True False 11624258.950203419 11947545.621730443 13050192.770533552 11782528.611315105 12125451.730255509 10072171.021823138 10020753.635658346 10554292.188894998 11734425.130777072 10481858.854653398 1.1089883112710353 1.1398308055280058 1.24502656937991 1.124087699967862 1.1568035687555973 0.9609145821832565 0.9560092131186879 1.0069103519944311 1.1194984871951028 1.0 23.321391251562492 -6.250329086262336 24.203060011258035 1.0058073429371468 1.1573975677583912 0.6489760891050784 0.05375558058028322 307.309619113666 669454.1474910711 0.018608229363283327 0.018429963816184496 5.619153729477925e-07 6.250329086262336 0.1515902248212444 KAMGISIPS(ph)PVMENNFVDLTEDTEEPK ddPTM_KYSE-520_SHP099_60min_R1 2 KAMGISIPSPVMENNFVDLTEDTEEPK 27 1 Q9NPI1-2;Q9NPI1;I3L4V5 Q9NPI1-2 BRD7 Bromodomain-containing protein 7 1 KAMGIS(0.048)IPS(0.947)PVMENNFVDLT(0.005)EDTEEPK;KAMGIS(0.041)IPS(0.959)PVMENNFVDLTEDTEEPK 137.47 1.6197e-06 338600000.0 232100.0 243792.0 171201.0 166372.0 183847.0 266050.0 157174.0 213975.0 300010.0 231960.0 True False 219224.95032012064 232079.86638074787 182236.89039128495 182183.9448584344 198314.7129536609 264389.4832637631 173062.68179041788 213232.77066714052 245535.74663665018 229905.0148621493 0.9535457521514595 1.0094597828581626 0.7926616585573564 0.7924313654822693 0.8625941155418906 1.1499944158342548 0.7527573154251811 0.9274820333736284 1.0679877808836533 1.0 17.81067840999202 KANLQQAIVT(ph)PLKPVDNTYYK ddPTM_KYSE-520_SHP099_60min_R1 1 KANLQQAIVTPLKPVDNTYYK 21 2 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KANLQQAIVT(1)PLKPVDNTYYK 127.14 3.643e-05 1024200000.0 1286600.0 1353100.0 1168100.0 970470.0 933890.0 1193100.0 881830.0 1118600.0 1442900.0 1192400.0 True False 1215229.7332264858 1288095.0449554927 1243397.5950260805 1062703.1770175556 1007381.8298927591 1185653.4203420277 970973.9822314396 1114719.8376832013 1180905.7325489905 1181836.2636731614 1.0282555803877071 1.0899099008453825 1.052089560326729 0.8991966228169893 0.8523869683621014 1.003229852379891 0.8215807993686374 0.9432100468965461 0.9992126395569563 1.0 20.172598741938156 -5.251458116336633 21.41157524506681 0.9240357714002557 1.0600676391144406 0.47387788032504374 0.060228942612690684 79.20414625422947 169902.68891473222 0.01606718531228779 0.027271517753014816 5.604564655711667e-06 5.251458116336633 0.13603186771418485 KANNSQEPS(ph)PQLASSVASTR ddPTM_KYSE-520_SHP099_60min_R1 4 KANNSQEPSPQLASSVASTR 20 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 KANNSQEPS(1)PQLASSVASTR;KANNSQEPS(1)PQLASSVASTR;KANNSQEPS(1)PQLASSVASTR;KANNSQEPS(1)PQLASSVASTR 171.63 3.1376e-09 5382150000.0 3974600.0 3756040.0 3386840.0 2623270.0 2439890.0 3606710.0 2866480.0 3405290.0 4254460.0 3773230.0 True False 3754121.0148313367 3575594.200469017 3605161.1255356027 2872584.7920851163 2631895.4619248994 3584199.185048858 3156251.7725488762 3393477.843790664 3481957.3102088734 3739802.1177285155 1.0038287846928966 0.9560918166014529 0.9639978298438178 0.7681114405673072 0.7037525994887298 0.9583927363584233 0.843962240030476 0.9073950270534094 0.9310538901784856 1.0 21.834530504858357 -5.087851594128378 10.840592472279386 0.8646446594613 0.9750059628824537 0.23199253406556375 0.08376702303175519 0.8420344104087742 100.51969518614722 0.023476122325036933 0.04071118634682748 8.168614592392441e-06 5.087851594128378 0.11036130342115369 KAPAGPSLEETSVSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 KAPAGPSLEETSVSSPK 17 1 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 KAPAGPSLEETS(0.007)VS(0.203)S(0.789)PK;KAPAGPSLEETS(0.001)VS(0.203)S(0.796)PK;KAPAGPSLEETS(0.001)VS(0.058)S(0.94)PK;KAPAGPSLEETSVS(0.039)S(0.961)PK;KAPAGPSLEETSVS(0.04)S(0.96)PK;KAPAGPSLEETS(0.001)VS(0.203)S(0.796)PK 186.9 2.0956e-12 24876200000.0 10548300.0 8739700.0 7770730.0 6688550.0 7197920.0 7832670.0 6555500.0 7448320.0 8831600.0 6798290.0 True False 9963164.771485267 8319831.693442847 8271643.689407605 7324227.781014111 7764355.35343744 7783783.401148592 7218193.915514554 7422483.5163709605 7228004.066518586 6738062.439589581 1.4786394250291526 1.2347513499666547 1.2275997385847073 1.0869931596330284 1.1523127639509334 1.1551960924871907 1.071256608294983 1.1015753538821567 1.0727125388524668 1.0 22.683902366865006 -1.0000000000000002 0.5282105712804831 1.0806190403478408 16.00950987554035 0.8846130339272131 0.043177986274196084 37.08609647147609 0.36407104950284164 0.021521431952915136 622.3945674222965 0.09999999999999995 1.0000000000000002 14.928890835192508 KAPAGQEEPGT(ph)PPS(ph)SPLSAEQLDR ddPTM_KYSE-520_SHP099_60min_R1 5 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 2 KAPAGQEEPGT(1)PPS(0.627)S(0.287)PLS(0.086)AEQLDR;KAPAGQEEPGT(1)PPS(0.861)S(0.135)PLS(0.003)AEQLDR;KAPAGQEEPGT(1)PPS(0.611)S(0.377)PLS(0.012)AEQLDR;KAPAGQEEPGT(1)PPS(0.917)S(0.083)PLSAEQLDR;KAPAGQEEPGT(1)PPS(0.918)S(0.081)PLS(0.001)AEQLDR 148.66 8.0423e-07 9170130000.0 3713920.0 3353190.0 3302400.0 3206300.0 3324530.0 3067000.0 2878050.0 3277430.0 3863050.0 3059510.0 True False 3507901.4540840276 3192097.719159198 3515277.988026819 3511025.7879907554 3586151.597011825 3047857.715354115 3168991.381061196 3266061.3602879117 3161617.4995657196 3032405.1216627588 1.1568050156044256 1.0526620260451462 1.1592375843565674 1.1578353310739544 1.1826096623413664 1.005095820997322 1.045042220257016 1.0770531077645167 1.0426105262057168 1.0 21.532031076121577 -6.2647762115533405 24.99998759377079 1.039468770829435 1.1387324337987363 0.663708174331137 0.03825981020720274 205.4171075752424 1539004.0065362856 0.013755195521386966 0.012642315978373436 5.435303361462145e-07 6.2647762115533405 0.09926366296930134 KAPAGQEEPGT(ph)PPSS(ph)PLSAEQLDR ddPTM_KYSE-520_SHP099_60min_R1 2 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 2 KAPAGQEEPGT(0.998)PPS(0.115)S(0.886)PLS(0.001)AEQLDR;KAPAGQEEPGT(1)PPS(0.076)S(0.924)PLS(0.001)AEQLDR 124.25 0.00015509 4394400000.0 2716800.0 2394390.0 2299790.0 2086250.0 2281690.0 2227800.0 2011670.0 2265770.0 2687200.0 2051080.0 True False 2566093.688193468 2279359.91034734 2448038.1431941013 2284526.5727460645 2461246.021959772 2213895.4738395493 2215029.235607228 2257910.572704695 2199272.218799398 2032909.0269160946 1.2622766952273363 1.1212306503479448 1.2042044728916148 1.1237721622062309 1.210701506743497 1.0890283060024628 1.089586010136129 1.1106795940248866 1.0818350401718049 1.0 20.95511422506087 -1.0000000001290934 0.06430001872169482 0.815605428019359 1.8231149098041821 0.6873193220125526 0.0405288720643116 168.93077802955207 0.8094093601406329 2.4114790936514385 15.679443190697384 0.09999999997027514 1.0000000001290934 1.0075094817848231 KAPAGQEEPGT(ph)PPSSPLSAEQLDR ddPTM_KYSE-520_SHP099_60min_R1 9 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 1 KAPAGQEEPGT(0.66)PPS(0.336)S(0.005)PLSAEQLDR;KAPAGQEEPGT(0.909)PPS(0.081)S(0.01)PLSAEQLDR;KAPAGQEEPGT(0.982)PPS(0.018)SPLSAEQLDR;KAPAGQEEPGT(0.991)PPS(0.007)S(0.002)PLSAEQLDR;KAPAGQEEPGT(0.989)PPS(0.011)SPLSAEQLDR;KAPAGQEEPGT(0.996)PPS(0.004)SPLSAEQLDR;KAPAGQEEPGT(0.998)PPS(0.002)SPLSAEQLDR;KAPAGQEEPGT(0.995)PPS(0.004)S(0.001)PLSAEQLDR;KAPAGQEEPGT(0.996)PPS(0.003)SPLSAEQLDR 160.78 6.237300000000001e-10 30743340000.0 12067980.0 12465520.0 10450540.0 8669680.0 9501370.0 11548690.0 9514520.0 11271510.0 14057220.0 12155260.0 True False 11398545.092478301 11866657.708073027 11124198.52985521 9493643.780565655 10249073.763599744 11476610.34194097 10476340.534366805 11232411.76260022 11504783.201678788 12047573.853049167 0.9461278454494305 0.9849831885504192 0.9233559109529546 0.7880129141655249 0.8507168238695434 0.952607594020792 0.8695809348963076 0.9323380706861047 0.9549460615065662 1.0 23.522239309207364 -9.432967738826672 7.032665890632171 0.9999999999953927 0.9091059843946778 0.1821614974082495 0.05612443007996492 77161768.08396329 0.0 0.05912613223332236 0.014781532948199592 3.690050087558525e-10 9.432967738826672 -0.09089401560071486 KAPAGQEEPGTPPS(ph)SPLSAEQLDR ddPTM_KYSE-520_SHP099_60min_R1 3 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 1 KAPAGQEEPGT(0.394)PPS(0.571)S(0.032)PLS(0.003)AEQLDR;KAPAGQEEPGT(0.001)PPS(0.969)S(0.03)PLSAEQLDR;KAPAGQEEPGT(0.002)PPS(0.553)S(0.438)PLS(0.008)AEQLDR 141.38 7.976899999999999e-07 1915460000.0 1225030.0 1415740.0 1122760.0 849090.0 1060150.0 1315370.0 1068150.0 1231670.0 1634120.0 1251590.0 True False 1157075.143863239 1347725.7253309365 1195134.9060795163 929787.2583117832 1143577.7735716284 1307160.287918274 1176129.0261394049 1227397.6242439398 1337405.0008129168 1240501.8863222853 0.9327475891984482 1.0864358532549576 0.9634285278055735 0.7495250660749276 0.9218670170361387 1.0537350263880783 0.9481074064516527 0.9894363223282185 1.0781160557344416 1.0 20.242492498335846 -6.243770337154746 24.018224651650765 1.009108011150267 0.9311889694454603 0.19857444565238136 0.08317257662765029 1001.9252069188199 1361955.4402856722 0.03008851423227074 0.03001436541158783 5.704658652868606e-07 6.243770337154746 -0.07791904170480679 KAPAGQEEPGTPPSS(ph)PLSAEQLDR ddPTM_KYSE-520_SHP099_60min_R1 1 KAPAGQEEPGTPPSSPLSAEQLDR 24 1 P13051;Q68DM5;F5GYA2;P13051-2 P13051 UNG;DKFZp781L1143 Uracil-DNA glycosylase 1 KAPAGQEEPGT(0.001)PPS(0.207)S(0.792)PLSAEQLDR 177.14 6.1466e-11 867570000.0 305200.0 397140.0 256360.0 252170.0 253820.0 440020.0 237950.0 398090.0 435360.0 384320.0 True False 288269.9475988834 378060.7982807071 272885.3757905024 276136.1609823247 273794.1899617516 437273.6719628684 262004.30816820802 396709.1187049048 356309.5985324894 380915.2237964351 0.7567824271390574 0.9925064021141528 0.7163939867531656 0.7249281302810165 0.718779856664563 1.1479553576376664 0.687828398027551 1.0414630183353084 0.9354039331410519 1.0 18.53911042276526 -6.22135292851255 24.9986361154316 0.9479529677685778 0.7867778241784191 0.3137050019538077 0.13262853372377595 726.7314890959988 453203.0532138028 0.042915480003853264 0.04291504518321946 6.006853933416091e-07 6.22135292851255 -0.16117514359015872 KAPAPPVLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KAPAPPVLSPK 11 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 KAPAPPVLS(1)PK;KAPAPPVLS(1)PK 158.52 2.4696999999999997e-05 5199400000.0 4593600.0 4601200.0 4635600.0 4537000.0 5210200.0 5558000.0 5738600.0 6705600.0 7035700.0 5881600.0 True False 4338783.850885421 4380151.445457992 4934418.193222239 4968195.115901214 5620213.098017173 5523310.460364578 6318713.691338848 6682339.83869881 5758194.235563743 5829493.599815563 0.7442814331287188 0.7513776918112705 0.8464574338632701 0.8522515774026067 0.9640997115418376 0.9474768889941534 1.0839215419224002 1.146298511917095 0.9877692010410516 1.0 22.474939133236024 -5.695276291535307 0.8114758935444618 1.0650152014850809 0.7371473623383852 0.834987071958297 0.0513100896660612 0.25573603341684126 0.35932319456001416 0.027598813095271187 0.05098133061966114 2.01708271810084e-06 5.695276291535307 -0.3278678391466957 KAPDFVFYAPR ddPTM_KYSE-520_SHP099_60min_R1 3 KAPDFVFYAPR 11 1 E7EQR4;P15311;P26038;A0A2R8Y7M3;A0A2R8Y5S7;P35241;P35241-5;P35241-4 E7EQR4;P26038;A0A2R8Y7M3 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 ;; 172.13 2.6823e-05 4129175000.0 5587230.0 5554670.0 5706010.0 4116630.0 6062170.0 4953070.0 4789850.0 4310620.0 6781010.0 4180830.0 False True 5277295.214033125 5287815.3154703425 6073828.5345387915 4507873.277490063 6539228.289970967 4922156.05288197 5274054.782431147 4295667.465326275 5549749.519351334 4143791.09883652 1.273542774758811 1.2760815372558325 1.4657661039534982 1.0878620977673725 1.57807865647644 1.1878388498551475 1.2727607779050394 1.036651549961676 1.3392927845492921 1.0 21.982519843519196 -8.10118887056308 0.4377261534433842 0.9934786961105765 1.3326612249778536 0.2644895917563619 0.14905179410082214 1.7511655588013235 0.8265670769687002 0.206088773858239 0.09814754303356267 7.921567540784288e-09 8.10118887056308 0.33918252886727707 KAPEPEEEIEEVEES(ph)EDEGEDPALDSLSQAIAFQQAK ddPTM_KYSE-520_SHP099_60min_R1 3 KAPEPEEEIEEVEESEDEGEDPALDSLSQAIAFQQAK 37 1 G3V1V1;Q8TBF4 G3V1V1 ZCRB1 Zinc finger CCHC-type and RNA-binding motif-containing protein 1 1 KAPEPEEEIEEVEES(1)EDEGEDPALDSLSQAIAFQQAK;KAPEPEEEIEEVEES(1)EDEGEDPALDSLSQAIAFQQAK;KAPEPEEEIEEVEES(1)EDEGEDPALDSLSQAIAFQQAK 221.67 7.002500000000001e-23 310583000.0 179595.0 203806.0 154252.0 124963.0 132440.0 187211.0 141742.0 175914.0 210061.0 179829.0 True False 169632.50733624355 194014.85384095728 164195.33073192628 136839.4459485041 142862.27451948007 186042.54670660544 156070.66462861167 175303.79539263612 171919.21760688457 178235.854964845 0.9517305447307537 1.0885287580280887 0.9212250294101147 0.7677436505437928 0.8015349916415978 1.0437997828399916 0.8756412376140302 0.9835495525140708 0.9645602319510499 1.0 17.44342806144644 -8.814295029604022 12.763226951652742 0.999999479440118 0.9316754217766464 0.043317616623806954 0.09402583860008668 0.0 0.0 0.09764407187880896 0.02368216600421956 1.5335748242907059e-09 8.814295029604022 -0.0683240576634716 KAPLNIPGT(ph)PVLEDFPQNDDEK ddPTM_KYSE-520_SHP099_60min_R1 2 KAPLNIPGTPVLEDFPQNDDEK 22 1 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 KAPLNIPGT(1)PVLEDFPQNDDEK;KAPLNIPGT(1)PVLEDFPQNDDEK 201.66 7.678200000000001e-14 1331250000.0 943420.0 803910.0 696180.0 634510.0 606100.0 797790.0 826680.0 888410.0 832340.0 845490.0 True False 891086.6119388557 765288.9569064887 741056.8767273847 694813.6396276117 653796.6217627353 792810.6966848251 910248.8820193077 885328.3130664519 681208.0375839119 837999.6163812653 1.06334966570371 0.9132330635319821 0.8843164868350316 0.8291336010725473 0.7801872566314839 0.9460752501396366 1.0862163469119908 1.056478184190067 0.8128977916786804 1.0 19.67659005792591 -6.520588160957393 24.97376481849227 0.9968247747540689 0.8881802912943478 0.17627295914224117 0.09584596332834026 148.48988155981618 1618995.0108895316 0.03749628956249177 0.029538215624648066 3.015864596216969e-07 6.520588160957393 -0.10864448345972111 KAPLNIPGT(ph)PVLEDFPQNDDEKER ddPTM_KYSE-520_SHP099_60min_R1 7 KAPLNIPGTPVLEDFPQNDDEKER 24 2 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 KAPLNIPGT(1)PVLEDFPQNDDEKER;KAPLNIPGT(1)PVLEDFPQNDDEKER;KAPLNIPGT(1)PVLEDFPQNDDEKER;KAPLNIPGT(1)PVLEDFPQNDDEKER;KAPLNIPGT(1)PVLEDFPQNDDEKER;KAPLNIPGT(1)PVLEDFPQNDDEKER;KAPLNIPGT(1)PVLEDFPQNDDEKER 175.28 2.5329e-10 9810310000.0 6770490.0 6012620.0 6448870.0 5381360.0 5920370.0 5681170.0 5545360.0 5672920.0 7511250.0 5523520.0 True False 6394917.4230628 5723764.710073391 6864574.478756827 5892802.836435116 6386269.436702613 5645711.710706991 6105939.106298197 5653241.964589481 6147396.343203686 5474585.910033529 1.1681097946316885 1.0455155520681811 1.2538983936987456 1.076392431002882 1.1665301342697352 1.0312582181530539 1.115324374599284 1.0326337110225126 1.1228970454070446 1.0 22.384318414744104 -6.257928098929964 24.996697679343317 1.0658936330440383 1.139285850151754 0.292889331289365 0.0630857765504922 432.8483331407445 3081446.042106224 0.019836799485818974 0.019076829659267984 5.521688478672762e-07 6.257928098929964 0.07339221710771571 KAPPPPIS(ph)PT(ph)QLSDVS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7-3;Q9P0K7;Q9P0K7-2 Q9P0K7-3 RAI14 Ankycorbin 3 KAPPPPIS(0.999)PT(0.957)QLS(0.044)DVS(0.932)S(0.068)PR;KAPPPPIS(0.993)PT(0.545)QLS(0.462)DVS(0.833)S(0.167)PR 96.287 0.00049791 1434700000.0 647260.0 747340.0 704770.0 881090.0 1015890.0 1260000.0 1331220.0 1497230.0 1658150.0 1482470.0 True False 611355.1975191798 711436.6646197909 750200.6018718705 964828.5286906308 1095834.763376581 1252135.8726267302 1465792.7090551902 1492036.4585861089 1357071.7585599218 1469336.4691442081 0.41607569835604363 0.48418907415682394 0.5105710078160742 0.656642334109205 0.7458024668882225 0.8521777679390324 0.9975881902046018 1.0154491431463089 0.9235949607582576 1.0 20.486733371468965 -5.802720516259706 0.8082144537119881 1.0017484633207778 0.4175073932038963 0.9765625826858773 0.033611351125360116 0.0919245874949703 0.1310056250886727 0.019275724561259595 0.03108556341624412 1.5749961036695958e-06 5.802720516259706 -0.5842410701168815 down KAPPPPIS(ph)PTQLS(ph)DVS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7-3;Q9P0K7;Q9P0K7-2 Q9P0K7-3 RAI14 Ankycorbin 3 KAPPPPIS(0.993)PT(0.422)QLS(0.585)DVS(0.966)S(0.034)PR;KAPPPPIS(0.998)PT(0.099)QLS(0.903)DVS(0.959)S(0.041)PR 112.11 7.9953e-05 1096520000.0 1023480.0 1131730.0 1042090.0 1327360.0 1449100.0 1874130.0 2033010.0 2209960.0 2548700.0 2334100.0 True False 966705.5241432019 1077359.9920386365 1109264.7888029532 1453511.8953146653 1563135.9257488537 1862432.8594967746 2238526.4910655576 2202294.1645685406 2085920.3274985172 2313421.6899023238 0.4178682720762498 0.46569978864688705 0.47949096078968123 0.6282952656919348 0.6756813652139881 0.8050555018248357 0.9676257903331371 0.9519639995514717 0.9016602276200618 1.0 21.14159683334443 -5.957977459091302 0.7901408017762743 0.9763000541723267 0.41616541930589823 0.9733514299952386 0.03489985476661229 0.09805637542408241 0.13573656786392455 0.02173717026182684 0.02928642297261363 1.1015964835153173e-06 5.957977459091302 -0.5601346348664284 down KAPPPPIS(ph)PTQLS(ph)DVSSPR ddPTM_KYSE-520_SHP099_60min_R1 1 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7-3;Q9P0K7;Q9P0K7-2 Q9P0K7-3 RAI14 Ankycorbin 2 KAPPPPIS(0.584)PT(0.444)QLS(0.968)DVS(0.003)S(0.001)PR 130.48 7.4716e-06 733800000.0 606180.0 586560.0 636640.0 678590.0 723030.0 726720.0 663320.0 700430.0 902920.0 642790.0 True False 572553.9870101286 558380.777155491 677678.8330600156 743082.9895744774 779928.3475220451 722184.2709169034 730374.8589793475 698000.3718115904 738972.488760923 637095.3806830521 0.8986942997393476 0.8764476938395498 1.06370074812574 1.1663606613781947 1.22419400794565 1.1335575375583864 1.1464136785865364 1.0955979166937921 1.1599087219383775 1.0 19.281149851529626 -4.878612515639565 3.379370726239127 1.1398066038781174 0.8845941681585913 0.750703027700245 0.05537590739900372 0.10293266851619609 2.277841522562578 0.014574666997627538 0.0352604840505921 1.3224750409761283e-05 4.878612515639565 -0.2552124357195261 KAPPPPIS(ph)PTQLSDVSSPR ddPTM_KYSE-520_SHP099_60min_R1 2 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7-3;Q9P0K7;Q9P0K7-2 Q9P0K7-3 RAI14 Ankycorbin 1 KAPPPPIS(0.976)PT(0.024)QLSDVSSPR;KAPPPPIS(0.958)PT(0.042)QLSDVSSPR 257.51 3.4082e-35 2706400000.0 2457700.0 2652400.0 2169900.0 1689110.0 1528060.0 1662620.0 1065560.0 1415650.0 1789480.0 1419990.0 True False 2321366.4816965153 2524974.722666431 2309775.225962756 1849642.5065505588 1648309.6285279116 1652242.9718624253 1173277.2036634425 1410739.440565194 1464555.541119806 1407409.9933355018 1.649388943299298 1.7940576908100168 1.6411530661997697 1.3142172610036573 1.1711652157744652 1.1739599545877033 0.8336427972085273 1.0023656555271443 1.040603340927594 1.0 20.424611231366388 -5.535851111840032 1.117571322221794 0.9874874563873813 1.761414759603251 0.9255957198790686 0.08469989777807103 0.12614603727351742 0.3227541625703588 0.034516027488294805 0.06713038950304918 2.911715163467325e-06 5.535851111840032 0.7739273032158697 KAPPPPISPTQLS(ph)DVS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7-3;Q9P0K7;Q9P0K7-2 Q9P0K7-3 RAI14 Ankycorbin 2 KAPPPPISPT(0.007)QLS(0.993)DVS(0.754)S(0.246)PR;KAPPPPIS(0.001)PT(0.026)QLS(0.973)DVS(0.818)S(0.182)PR 78.202 0.00481 1593110000.0 1010480.0 1031840.0 1030290.0 1238710.0 1338270.0 1432760.0 1250700.0 1273340.0 1478940.0 1445820.0 True False 954426.6600580589 982268.8575765836 1096704.1419222865 1356436.6259682588 1443584.2352852952 1423817.6133846634 1377132.9616557183 1268923.080739789 1210401.7770434564 1433011.1596309373 0.6660287700089267 0.6854579261124251 0.7653144461238777 0.9465638957882229 1.0073782228305053 0.9935844559307957 0.9610064460421857 0.8854942072234747 0.8446562114388471 1.0 20.450618414012524 -5.113766204362985 2.7092186927979993 0.9495932274143464 0.6777963866974531 0.8449887704500433 0.04860163443033385 0.11208077005922493 1.5908087914492608 0.015630153056670565 0.032057093425787705 7.695446010896586e-06 5.113766204362985 -0.27179684071689325 KAPPPPISPTQLS(ph)DVSSPR ddPTM_KYSE-520_SHP099_60min_R1 2 KAPPPPISPTQLSDVSSPR 19 1 Q9P0K7-3;Q9P0K7;Q9P0K7-2 Q9P0K7-3 RAI14 Ankycorbin 1 KAPPPPISPTQLS(0.996)DVS(0.003)S(0.001)PR;KAPPPPISPT(0.004)QLS(0.996)DVSSPR 223.44 4.5085e-19 1148200000.0 1110180.0 1075740.0 965390.0 982090.0 1007600.0 885180.0 716260.0 571500.0 783930.0 566060.0 True False 1048596.1023110363 1024059.8356813396 1027620.5840786134 1075427.5383238741 1086892.3875402287 879655.26327915 788666.5508239593 569517.5998891025 641588.0732671218 561045.1487880156 1.8690048467155291 1.8252717056613723 1.8316183399829877 1.916828869560749 1.9372636763514701 1.5678867648698225 1.4057095984657517 1.015101193049061 1.1435587218837862 1.0 19.097757347430722 -6.819170254136559 1.4961747838968935 1.0428943420880046 1.874495662179076 0.9620459105791497 0.07068219445203826 0.06924422641407613 0.3126625626049259 0.04252253371920973 0.024023895349561335 1.516455762897368e-07 6.819170254136559 0.8316013200910715 KAPS(ph)PPSK ddPTM_KYSE-520_SHP099_60min_R1 6 KAPSPPSK 8 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2;A0A0B4J1Z0 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 KAPS(0.997)PPS(0.003)K;KAPS(0.993)PPS(0.007)K;KAPS(0.949)PPS(0.051)K;KAPS(0.933)PPS(0.067)K;KAPS(0.936)PPS(0.064)K;KAPS(0.985)PPS(0.015)K 94.363 0.0038869 9903530000.0 7944810.0 7250110.0 5985180.0 5510320.0 5936100.0 7195340.0 5987360.0 7482610.0 8230700.0 6970830.0 True False 7504095.551713915 6901803.832963033 6370994.279426597 6034019.156061885 6403237.298211149 7150431.214084148 6592620.779802488 7456654.5723643 6736212.3590622805 6909073.869423677 1.0861217716781875 0.9989477552855791 0.9221198672692779 0.8733470317585726 0.9267866314975841 1.0349333860401473 0.9541974661724689 1.0792552972061795 0.9749805091639849 1.0 22.720060906054 -6.26467723264515 24.856822207714934 1.0102220455710786 0.9564657685332547 0.1267402445079694 0.06119319120407745 569.5581740473037 4372451.63891735 0.022560785804845426 0.020752992686779808 5.436542248264358e-07 6.26467723264515 -0.05375627703782393 KAPT(ph)PQEK ddPTM_KYSE-520_SHP099_60min_R1 12 KAPTPQEK 8 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK;KAPT(1)PQEK 151.79 0.00045099999999999996 94344770000.0 162897200.0 146177300.0 104310600.0 103757400.0 110402300.0 165998600.0 131755900.0 131743800.0 159776900.0 184530400.0 True False 153860967.58848253 139154723.09139928 111034628.17886116 113618472.10020012 119090332.9068405 164962541.16334563 145075072.18566775 131286811.50703396 130765442.60787782 182895604.21847874 0.841250221654793 0.7608423596948312 0.6070929296158712 0.621220354560718 0.6511383005388179 0.9019491849912856 0.7932124602205731 0.717823766558133 0.7149731299811416 1.0 27.446445160328715 -6.24274495766086 24.883396992870615 0.8059319997640145 0.6907660060891856 0.2761796914720477 0.1020021536955037 1240.2736585543453 1650879.563123864 0.035059351690014 0.034997677521229544 5.71814339885739e-07 6.24274495766086 -0.11516599367482894 KAPT(ph)TDEDKKAAEK ddPTM_KYSE-520_SHP099_60min_R1 2 KAPTTDEDKKAAEK 14 3 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 KAPT(0.792)T(0.208)DEDKKAAEK;KAPT(0.5)T(0.5)DEDKKAAEK 160.55 2.7528999999999998e-08 5081000000.0 2179500.0 1909640.0 2025600.0 1642920.0 1708640.0 1669440.0 1480950.0 1546940.0 2211200.0 1438040.0 True False 2058598.7902744657 1817898.02797192 2156173.417074593 1799062.622838092 1843100.2471682571 1659020.4057126737 1630658.878679167 1541574.026198509 1809701.819815875 1425300.084378191 1.4443265757418102 1.275449323196389 1.5127855815817597 1.2622342779295916 1.2931313674708282 1.1639797288277343 1.1440810932040089 1.0815785693796856 1.269698809149643 1.0 20.442834267314705 -5.989582231032476 1.1628382999383908 1.1250624122295465 1.3968112471613887 0.6387968605931189 0.08895451055028665 0.3016024038186782 0.8598908920001259 0.03865731146081203 0.04501229062558808 1.0242778211403606e-06 5.989582231032476 0.2717488349318422 KAPTNEFY(ph)A ddPTM_KYSE-520_SHP099_60min_R1 2 KAPTNEFYA 9 1 P31431 P31431 SDC4 Syndecan-4 1 KAPT(0.001)NEFY(0.999)A;KAPT(0.002)NEFY(0.998)A 52.482 0.039512 617230000.0 1842370.0 1692150.0 1671550.0 1684060.0 2112080.0 2016410.0 1768150.0 1859640.0 2540900.0 1878650.0 True False 1740170.0634264597 1610856.5740310657 1779300.7875745615 1844112.556068897 2278288.6799086602 2003824.8372406883 1946891.857481056 1853189.3428832372 2079536.6108765197 1862006.6225675836 0.9345670645504368 0.8651186061893815 0.9555824163079634 0.9903899017963685 1.223566367753865 1.0761641838188238 1.04558804135531 0.9952646357013554 1.1168255717635294 1.0 20.82842677343915 -5.357540382084314 2.9635360423869943 1.075540550944354 0.9088910751480397 0.5325324927040832 0.06556117108109819 0.20370331508570422 3.450832675653893 0.019753827649597825 0.03204249574517918 4.389950445855332e-06 5.357540382084314 -0.1666494757963144 KAPTT(ph)DEDKKAAEK ddPTM_KYSE-520_SHP099_60min_R1 1 KAPTTDEDKKAAEK 14 3 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 KAPT(0.146)T(0.854)DEDKKAAEK 107.02 0.00031611 634330000.0 346950.0 357200.0 393450.0 305110.0 357350.0 369010.0 273090.0 283050.0 437060.0 279730.0 True False 327703.9918723223 340039.57583186927 418812.4165422584 334107.5626653333 385471.4119566301 366706.8717126906 300696.602301559 282068.1656143669 357700.9213860012 277251.8098266467 1.181972417338668 1.2264647651695437 1.5105849689642181 1.2050690052275437 1.3903296508601635 1.3226491540018304 1.0845613685608448 1.0173717740227977 1.2901662269027416 1.0 18.08083735238703 -6.760891328616579 24.99861260706784 1.0994724588133404 1.3110753955651595 0.4356583915891368 0.1159762517715569 13.976983085608296 637588.2967171661 0.045406697112643925 0.03300222539255801 1.7342378933293787e-07 6.760891328616579 0.21160293675181907 KAQTNDS(ph)DS(ph)DTESKR ddPTM_KYSE-520_SHP099_60min_R1 2 KAQTNDSDSDTESKR 15 2 O14647;O14647-2;A0A1B0GTM9;A0A1B0GTU9 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 2 KAQT(0.001)NDS(0.999)DS(0.992)DT(0.008)ES(0.001)KR;KAQT(0.002)NDS(0.998)DS(0.869)DT(0.128)ES(0.003)KR 148.01 5.289199999999999e-06 1063620000.0 2293980.0 2102000.0 1929080.0 1826600.0 1863580.0 1950920.0 1654240.0 1786540.0 2606070.0 1750340.0 True False 2166728.356464244 2001016.7648336769 2053431.5834371338 2000199.5148126865 2010233.1436802514 1938743.5846229708 1821466.723026588 1780342.9097215687 2132873.38167853 1734833.3493439143 1.248954752503268 1.1534345737533975 1.183647745885049 1.152963491028766 1.1587471179525624 1.1175388029957876 1.0499375768372432 1.026232813886628 1.2294399242931018 1.0 20.726365651365423 -1.0000000000013052 0.11587978021639582 0.9759303704708546 1.7450880937239064 0.4627038416675665 0.05818449653765628 90.9279170637395 0.7305303267094828 0.448463967784536 11.242741639322832 0.09999999999969947 1.0000000000013052 0.7691577232530518 KAQTNDS(ph)DSDT(ph)ESKR ddPTM_KYSE-520_SHP099_60min_R1 1 KAQTNDSDSDTESKR 15 2 O14647;O14647-2;A0A1B0GTM9;A0A1B0GTU9 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 2 KAQT(0.136)NDS(0.861)DS(0.144)DT(0.855)ES(0.005)KR 131.56 9.753e-05 1176200000.0 2174300.0 2069800.0 1953300.0 1757400.0 1774300.0 1858500.0 1541100.0 1716300.0 2454200.0 1788500.0 True False 2053687.2446404092 1970363.7011668605 2079212.8433905016 1924422.7676184212 1913927.3156139643 1846900.4121244294 1696889.427686596 1710346.5558874307 2008579.1453473773 1772655.281431944 1.158537289315184 1.1115323558990038 1.172936929796594 1.0856159050077012 1.0796951531760317 1.0418835695073836 0.9572585518803494 0.9648500606986709 1.1330906614425647 1.0 20.757480579829576 -5.889156891413127 1.4152414275823202 1.0118993611584064 1.143039637384307 0.5533047487311288 0.0490831392478861 0.30744153528806756 1.2807731176454031 0.019704144280473252 0.02436922370274685 1.2907528973699543e-06 5.889156891413127 0.13114027622590063 KAQVS(ph)PQS ddPTM_KYSE-520_SHP099_60min_R1 6 KAQVSPQS 8 1 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 KAQVS(0.989)PQS(0.011);KAQVS(0.597)PQS(0.403);KAQVS(0.936)PQS(0.064);KAQVS(0.86)PQS(0.14);KAQVS(0.5)PQS(0.5);KAQVS(0.758)PQS(0.242) 80.24 0.011489 145056100000.0 120923100.0 90990100.0 90095600.0 87651200.0 90379080.0 105683000.0 114214200.0 81056790.0 101975600.0 105374000.0 True False 114215254.58877636 86618799.01707536 95903306.53405675 95981543.69470568 97491399.40937807 105023393.19588172 125760085.95917355 80775622.91428706 83459401.63568018 104440468.33973154 1.09359194194006 0.829360499756813 0.9182581049148066 0.9190072126303565 0.9334638283337734 1.0055814079103322 1.2041317695942535 0.7734130667772787 0.7991097987438871 1.0 26.638105591317416 -11.29718032285015 2.1961668211121643 1.2629729366109115 0.9414990908262648 0.018894973899717615 0.12586818008062753 45080237.655434206 5067232.73798993 59051740.97419082 0.03265369931438069 5.044518012942028e-12 11.29718032285015 -0.32147384578464666 KAQVSPQS(ph) ddPTM_KYSE-520_SHP099_60min_R1 3 KAQVSPQS 8 1 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 KAQVS(0.325)PQS(0.675);KAQVS(0.382)PQS(0.618);KAQVS(0.245)PQS(0.755) 78.556 0.021116 49329100000.0 23328800.0 16959400.0 16744800.0 16556700.0 16608700.0 19499900.0 20925500.0 14322900.0 19539800.0 18112200.0 True False 22034704.959190134 16144644.967421615 17824196.600627284 18130243.790046625 17915710.199423786 19378193.89097935 23040853.75319957 14273217.202889992 15991864.878273457 17951739.99907837 1.227441181764073 0.8993359400398218 0.9928952069015241 1.0099435370040686 0.9979929633753366 1.0794604808210353 1.2834886063625293 0.795088231203369 0.8908253394431107 1.0 24.097620350398074 -7.300548314944824 24.999794865882667 0.8822175962076801 1.0558194742574212 0.31184579892812136 0.11716638105434528 693.7990650503564 443496.9906192057 0.06411245230870741 0.030799295764145994 5.005548630671999e-08 7.300548314944824 0.17360187804974103 KAS(ph)DVHEVR ddPTM_KYSE-520_SHP099_60min_R1 2 KASDVHEVR 9 1 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BR70;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 KAS(1)DVHEVR;KAS(1)DVHEVR 100.69 0.0015664000000000001 2905540000.0 4373160.0 4204830.0 5283300.0 4205310.0 4493650.0 3807320.0 4467350.0 4433670.0 5513210.0 5568410.0 True False 4130572.0971216713 4002823.655221492 5623869.971578883 4604981.398027448 4847274.689628975 3783557.1036263504 4918953.33513446 4418290.633596358 4512150.040714128 5519078.219557422 0.748417024148084 0.7252703252215332 1.0189871837021842 0.8343750921502112 0.8782761353974216 0.6855414895586959 0.8912635660251456 0.8005486528420072 0.8175550085021189 1.0 22.395995901704286 -11.26189011573674 2.0634578443252285 1.608974072888731 0.8245578097908901 0.25989521470709276 0.0899115787399503 19817026.454298586 2758809.735855893 56324263.30334122 0.024386015885156518 5.471543852167863e-12 11.26189011573674 -0.7844162630978408 KAS(ph)FEAEVIQDTIGDTGK ddPTM_KYSE-520_SHP099_60min_R1 3 KASFEAEVIQDTIGDTGK 18 1 A0A2R8Y5I4;Q6ZVD7 A0A2R8Y5I4 STOX1 Storkhead-box protein 1 1 KAS(1)FEAEVIQDTIGDTGK;KAS(1)FEAEVIQDTIGDTGK;KAS(1)FEAEVIQDTIGDTGK 213.16 2.3032000000000002e-18 199949000.0 340093.0 310455.0 277754.0 253042.0 273555.0 293606.0 267745.0 292293.0 354470.0 313039.0 True False 321227.3633314128 295540.2757975446 295658.46726211306 277091.0356001483 295082.2221849617 291773.4960463839 294811.27753938606 291279.10380469874 290107.18346152944 310265.71800065704 1.0353298630650922 0.9525392547458907 0.9529201910134556 0.8930765454389051 0.9510629278879493 0.9403987586078267 0.950189661426796 0.9388053107565106 0.9350281601556608 1.0 18.243144773292695 -4.216130431331636 2.6749677132201617 0.9415266812771114 1.0604170086406368 0.5378038539706054 0.02473357626028311 0.40374415331620334 3.456113745963944 0.006042452696775591 0.11204879579431266 6.0795238797946616e-05 4.216130431331636 0.11889032736352545 KAS(ph)FLR ddPTM_KYSE-520_SHP099_60min_R1 1 KASFLR 6 1 P46777;A0A2R8Y4A2 P46777 RPL5 60S ribosomal protein L5 1 KAS(1)FLR 90.65700000000001 0.0099337 781590000.0 794990.0 786560.0 820430.0 756030.0 790040.0 710620.0 704830.0 757540.0 829470.0 832040.0 True False 750890.319926725 748772.4769493698 873316.2305344121 827882.8638912911 852211.6532873001 706184.7569888957 776081.0948779075 754912.2705511658 678859.1572371002 824668.772917324 0.9105356533270897 0.9079675398651683 1.0589902991536764 1.0038974326172156 1.0333987187031968 0.8563253274289959 0.9410821900439686 0.9154127030669663 0.8231900849544576 1.0 19.653455253646683 -6.262094934070973 24.99983036639686 0.9040328637440732 0.9841791218408641 0.2673331716310845 0.06258040541469853 84.19264035530601 3210678.8067789045 0.021934795325888108 0.02048815389805526 5.468964016769057e-07 6.262094934070973 0.08014625809679088 KAS(ph)GPPVSELITK ddPTM_KYSE-520_SHP099_60min_R1 4 KASGPPVSELITK 13 1 P10412;P16403;P16402 P10412;P16402 HIST1H1E;HIST1H1C;HIST1H1D Histone H1.4;Histone H1.2;Histone H1.3 1 KAS(1)GPPVSELITK;KAS(1)GPPVSELITK;KAS(1)GPPVSELITK;KAS(1)GPPVSELITK 128.79 3.1412e-05 3871130000.0 7408800.0 6151340.0 6329000.0 5479840.0 5324660.0 5981450.0 6184800.0 6163300.0 6727200.0 6984800.0 True False 6997819.094923363 5855820.393050421 6736977.466758042 6000642.346026027 5743680.448828851 5944117.551843775 6810019.94183121 6141920.950825038 5505710.058911612 6922920.106092172 1.0108189878957696 0.8458598833023218 0.9731410103706815 0.8667790836912099 0.8296615244446358 0.8586142062527848 0.9836918290936782 0.8871864555276532 0.7952872450552456 1.0 22.722949268163518 -4.246842562980146 23.771033228851113 0.8912418086057589 1.0108191552238046 0.22023963451038986 0.06619757756369918 1986.823308084941 3235450.7929491173 0.01609458948985595 0.32186719571855776 5.66444594862522e-05 4.246842562980146 0.11957734661804575 KAS(ph)GS(ph)ENEGDYNPGR ddPTM_KYSE-520_SHP099_60min_R1 1 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KAS(1)GS(0.999)ENEGDY(0.001)NPGR 61.015 0.035325 442590000.0 478950.0 489600.0 405480.0 468590.0 496830.0 502530.0 514310.0 559020.0 633430.0 545170.0 True False 452381.68873684586 466078.8810954169 431617.8895909391 513124.6527132791 535927.69442399 499393.5238659619 566301.473981892 557080.8900962488 518415.0794708625 540340.2179358421 0.8372163938952993 0.8625655940916048 0.7987891244515649 0.9496325383171932 0.9918338051372366 0.924220532341085 1.0480461294279086 1.0309817252255586 0.9594234563017797 1.0 19.043508541294294 -5.420247311097757 3.9017790720155934 0.992223376152226 0.8364171796095287 0.799017066252762 0.03571264189547999 0.10476578176493302 2.8319093792695487 0.010782538313986283 0.016293056682269998 3.7997295725802344e-06 5.420247311097757 -0.15580619654269734 KAS(ph)GS(ph)ENEGDYNPGRK ddPTM_KYSE-520_SHP099_60min_R1 3 KASGSENEGDYNPGRK 16 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KAS(0.994)GS(0.962)ENEGDY(0.044)NPGRK;KAS(0.99)GS(0.967)ENEGDY(0.043)NPGRK;KAS(1)GS(1)ENEGDYNPGRK 88.945 0.0016968 3521010000.0 5569000.0 6082800.0 5517600.0 5606200.0 5549400.0 5246000.0 5374700.0 5903100.0 7835400.0 6025500.0 True False 5260076.468473737 5790573.157531052 5873273.324472134 6139011.562434505 5986106.208233174 5213257.7680951 5918027.128017103 5882623.523893903 6412688.8743602205 5972118.757768058 0.8807722488156899 0.969601140298681 0.9834488500136817 1.0279453258442601 1.002342125304679 0.8729327027052347 0.9909426399666623 0.9850144919242024 1.0737711580197737 1.0 22.509811423600972 -4.2393763705310565 2.531825824616778 0.9887341782444328 0.853929760769168 0.3282511272462565 0.047471865122073284 0.7175768671823801 5.574424381553871 0.012854884054113443 0.21267746037411908 5.762668395799666e-05 4.2393763705310565 -0.13480441747526473 KAS(ph)GSENEGDYNPGR ddPTM_KYSE-520_SHP099_60min_R1 1 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KAS(0.5)GS(0.5)ENEGDYNPGR 213.98 4.3213e-14 239690000.0 154940.0 154570.0 145020.0 179550.0 199120.0 180550.0 214970.0 239020.0 250180.0 219930.0 True False 146345.16933476742 147144.22518569996 154368.22124020406 196614.37801632425 214789.61116217772 179423.12047837794 236701.26550502083 238190.8954076871 204753.61852457293 217981.5913029507 0.6713648086520159 0.6750305120086907 0.7081709070820719 0.9019769827401145 0.9853566527260701 0.823111343512562 1.0858773169338578 1.0927110586904998 0.9393161014225576 1.0 17.733846777983338 -5.352561866096284 0.9617992856535116 1.0119381370883902 0.6317137053587321 0.7776473487578359 0.07224739071710494 0.30396924771001155 0.5388537050200911 0.03099922006189021 0.08362148766471572 4.440564001592689e-06 5.352561866096284 -0.38022443172965814 KAS(ph)ISYFK ddPTM_KYSE-520_SHP099_60min_R1 1 KASISYFK 8 1 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 KAS(0.995)IS(0.005)YFK 122.7 0.00096458 677660000.0 930350.0 816900.0 678930.0 649260.0 708480.0 861830.0 853980.0 881600.0 1090400.0 1016000.0 True False 878741.6308932547 777654.8978081011 722694.9141264077 710965.4751928636 764233.3453002194 856450.9992903929 940308.6324416322 878541.9353669863 892410.8467471208 1006999.0304360387 0.8726340386968917 0.7722498972728606 0.7176719066089616 0.7060239917857813 0.758921629715274 0.8504983355540497 0.933773125913012 0.8724357311313106 0.8862082482449856 1.0 19.941630863606516 -6.444168270786821 3.0438512909765185 0.9119528244603257 0.7598756343452564 0.6585632663966323 0.05315306132375374 0.17641217698313022 3.182307699193233 0.021555817746536716 0.01799662709067588 3.5960997446781406e-07 6.444168270786821 -0.15207719011506926 KAS(ph)PEAASTPR ddPTM_KYSE-520_SHP099_60min_R1 4 KASPEAASTPR 11 1 P29590-12;P29590-13;P29590-11;H3BT57;H3BUJ5;P29590-14;P29590-10;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4;H3BVD2;H3BT29 P29590-12;P29590-2 PML Protein PML 1 KAS(0.999)PEAAS(0.001)TPR;KAS(1)PEAASTPR;KAS(0.672)PEAAS(0.327)T(0.001)PR;KAS(1)PEAASTPR 158.52 2.4696999999999997e-05 7854120000.0 6485800.0 5421340.0 4848270.0 5558900.0 5784430.0 5512360.0 5637500.0 6197110.0 6202050.0 5924790.0 True False 6126019.744878248 5160890.688802764 5160797.241706275 6087216.184655765 6239631.732095398 5477955.316533875 6207393.516697944 6175613.671826343 5075914.060957426 5872300.970016873 1.0432060236961331 0.8788532323451287 0.878837319145692 1.0365981266519237 1.0625531225245544 0.9328464846239198 1.0570632446109294 1.0516514230721723 0.8643824774776218 1.0 22.48549448110603 -5.26959849073957 24.967514156592618 1.004974954841947 0.9281542947265652 0.1501115153364141 0.07231896499069641 990.2318401397717 3030186.191646978 0.02005712550338599 0.030363913791216387 5.375285168029052e-06 5.26959849073957 -0.07682066011538191 KAS(ph)PEAASTPRDPIDVDLDVSNTTTAQK ddPTM_KYSE-520_SHP099_60min_R1 2 KASPEAASTPRDPIDVDLDVSNTTTAQK 28 2 P29590-12;P29590-13;P29590-11;H3BT57;H3BUJ5 P29590-12 PML Protein PML 1 KAS(0.999)PEAAS(0.001)T(0.001)PRDPIDVDLDVSNTTTAQK;KAS(0.909)PEAAS(0.046)T(0.046)PRDPIDVDLDVSNTTTAQK 292.15 2.4049999999999997e-52 4172400000.0 1224620.0 1094270.0 823830.0 818130.0 841880.0 974010.0 798890.0 935790.0 1377530.0 1043860.0 True False 1156687.8873805525 1041699.6266672434 876935.3999746063 895884.8292202459 908131.1663580462 967930.8422993361 879649.5976150444 932543.962905029 1127405.2767053938 1034612.2125107902 1.1179917203698087 1.0068503097786305 0.8475981525932941 0.8659136422197438 0.8777502868965749 0.9355494073961952 0.8502215486905151 0.9013463707739707 1.089688738517221 1.0 19.980658695579066 -10.329876613363318 10.289062513934653 0.9999999999768114 0.9342341250016564 0.02318420256153586 0.09311898430741897 1.8571320139445536e-08 1.2203992020604945e-09 0.09363000503921581 0.022708608918072276 4.678680475694282e-11 10.329876613363318 -0.06576587497515507 KAS(ph)PEAASTPRDPIDVDLPEEAER ddPTM_KYSE-520_SHP099_60min_R1 5 KASPEAASTPRDPIDVDLPEEAER 24 2 P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4;H3BVD2;H3BT29 P29590-2 PML Protein PML 1 KAS(1)PEAASTPRDPIDVDLPEEAER;KAS(0.698)PEAAS(0.151)T(0.151)PRDPIDVDLPEEAER;KAS(0.972)PEAAS(0.023)T(0.005)PRDPIDVDLPEEAER;KAS(1)PEAASTPRDPIDVDLPEEAER;KAS(1)PEAASTPRDPIDVDLPEEAER 173.96 1.0847e-10 5586820000.0 3093790.0 3112100.0 2998390.0 2461060.0 2643490.0 2721190.0 2263380.0 2461730.0 3793920.0 2674770.0 True False 2922171.3013825403 2962590.044642666 3191671.016993627 2694958.4024553318 2851517.6235993677 2704206.0438358244 2492184.538860092 2453190.8332021004 3105039.764940235 2651073.618739568 1.1022595829578898 1.117505762081102 1.2039164036912267 1.016553589234775 1.0756086151070747 1.0200418519956143 0.9400661382028995 0.925357491342866 1.1712386042363099 1.0 21.338145302869894 -5.283037374605367 23.75081344840952 1.0169863531001204 1.1388550925614094 0.3858544381888239 0.0691873952092289 422.61083933485736 464734.25550452975 0.0198027952944775 0.02941020816508569 5.211498599515437e-06 5.283037374605367 0.12186873946128896 KAS(ph)PEPEGEAAGK ddPTM_KYSE-520_SHP099_60min_R1 8 KASPEPEGEAAGK 13 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK;KAS(1)PEPEGEAAGK 212.32 3.6692e-11 16668700000.0 16661470.0 14884580.0 14029810.0 12081000.0 13295300.0 14584120.0 13367070.0 14204680.0 16369590.0 14417940.0 True False 15737225.045283007 14169502.434589928 14934194.0010897 13229174.607714916 14341564.470090918 14493095.09737536 14718343.885631504 14155407.280477224 13397285.099782828 14290208.268587587 1.1012593203330856 0.9915532487890333 1.0450648248365775 0.925751000900035 1.0035938035708143 1.0141976117474616 1.029960068390678 0.9905668982861027 0.937515034629162 1.0 23.7685236069482 KAS(ph)PEPPDSAEGALK ddPTM_KYSE-520_SHP099_60min_R1 15 KASPEPPDSAEGALK 15 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 KAS(1)PEPPDSAEGALK;KAS(0.999)PEPPDS(0.001)AEGALK;KAS(1)PEPPDSAEGALK;KAS(0.903)PEPPDS(0.097)AEGALK;KAS(1)PEPPDSAEGALK;KAS(0.987)PEPPDS(0.013)AEGALK;KAS(1)PEPPDSAEGALK;KAS(1)PEPPDSAEGALK;KAS(1)PEPPDSAEGALK;KAS(0.999)PEPPDS(0.001)AEGALK;KAS(0.992)PEPPDS(0.008)AEGALK;KAS(1)PEPPDSAEGALK;KAS(0.984)PEPPDS(0.016)AEGALK;KAS(1)PEPPDSAEGALK;KAS(1)PEPPDSAEGALK 222.64 2.2771e-14 82589340000.0 38629160.0 34562360.0 29410840.0 24236860.0 26427510.0 32810890.0 27416300.0 33120470.0 39639860.0 31387190.0 True False 36486323.48947865 32901932.34643999 31306709.80540783 26540323.8873223 28507204.685036976 32606105.064928323 30187807.16130297 33005582.819945786 32442260.663552158 31109123.91546433 1.1728495983566196 1.0576296663270692 1.0063513807229165 0.8531363325898457 0.916361539543904 1.0481203248774178 0.970384355513677 1.0609615015078817 1.042853561280301 1.0 24.8908344309703 -4.410170413675117 2.226564230691836 0.983775193173545 1.1902857925368808 0.4771091509267441 0.06001967366250115 0.4318401370699325 3.122452203103052 0.01778823309357324 0.15467662352999473 3.8889251674343705e-05 4.410170413675117 0.20651059936333582 KAS(ph)QLVGIEK ddPTM_KYSE-520_SHP099_60min_R1 1 KASQLVGIEK 10 1 Q9NPD8 Q9NPD8 UBE2T Ubiquitin-conjugating enzyme E2 T 1 KAS(1)QLVGIEK 136.14 4.5941000000000006e-05 0.0 475670.0 391240.0 337970.0 212280.0 191890.0 290100.0 249700.0 267560.0 343270.0 360840.0 True False 449283.6368753631 372444.24313678715 359756.0869711198 232455.02737569078 206990.65129525066 288289.378292869 274942.11283715756 266631.8968089732 280940.821132505 357643.2383292724 1.2562341146841978 1.0413848305273643 1.0059076991129974 0.6499634341239124 0.5787629377874047 0.806080885632315 0.76876083026635 0.7455247806572327 0.7855337135546525 1.0 18.448161640354787 -4.904480104997957 2.0700216254314943 0.7479475590023218 1.1869179304408914 0.6535366903712478 0.11530424784098425 0.19212699744806205 1.6104960229765877 0.03259740018155042 0.09740921251471048 1.2460053153860324e-05 4.904480104997957 0.43897037143856965 KAS(ph)QQSNQIQTQR ddPTM_KYSE-520_SHP099_60min_R1 2 KASQQSNQIQTQR 13 1 H0YMH7;Q05D32-2;Q05D32;H0YNU2;H0YNW9 H0YMH7 CTDSPL2 CTD small phosphatase-like protein 2 1 KAS(0.987)QQS(0.012)NQIQTQR;KAS(0.998)QQS(0.001)NQIQT(0.001)QR 139.49 0.00022014 225430000.0 127164.0 157153.0 155466.0 163958.0 183079.0 258340.0 286840.0 427620.0 444720.0 352400.0 True False 120109.95942485065 149603.13398853785 165487.58711439505 179540.51902422987 197486.27572298291 256727.6042336427 315836.5864886272 426136.6860272586 363970.0584788876 349278.0101630512 0.3438806793728025 0.42832107844035067 0.47379904345292606 0.5140332737821546 0.5654128515871688 0.7350236681484649 0.9042555709166668 1.2200501423732 1.042064051810699 1.0 18.4140162908674 -6.548823052204345 1.1564231041483244 1.1094602956667334 0.43117591752879997 0.9351249159227636 0.07292580716649366 0.10805916100286826 0.29539984879057324 0.04410157546548545 0.03054106008198995 2.8260311710493815e-07 6.548823052204345 -0.6782843781379335 down KAS(ph)SPNLHR ddPTM_KYSE-520_SHP099_60min_R1 1 KASSPNLHR 9 1 A0A087X030;P51956-2;P51956 A0A087X030 NEK3 Serine/threonine-protein kinase Nek3 1 KAS(0.672)S(0.328)PNLHR 84.352 0.0030775999999999998 0.0 356170.0 401030.0 373010.0 514620.0 410550.0 369690.0 336750.0 322970.0 421570.0 340120.0 True False 336412.54009270796 381763.9168416976 397054.82143710216 563529.3300738552 442857.94929003704 367382.6275804572 370791.97636328725 321849.69245176506 345023.5149148783 337106.8014093562 0.9979405300820224 1.1324717129575599 1.1778309419362614 1.6716640771348579 1.3137022078420333 1.089810784132879 1.0999243409302395 0.9547410230413474 1.0234842888735094 1.0 18.36284620962177 -6.477223872559084 2.9667193981514077 1.0175724348536854 1.2684389845571085 0.3176000378019814 0.1663983809802821 0.3596384913277811 6.318532067870531 0.07321282013933145 0.059802275936353524 3.332545805353612e-07 6.477223872559084 0.25086654970342304 KAS(ph)SPS(ph)PLTIGTPESQR ddPTM_KYSE-520_SHP099_60min_R1 1 KASSPSPLTIGTPESQR 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 2 KAS(0.814)S(0.187)PS(0.993)PLT(0.004)IGT(0.001)PESQR 67.76 0.014253 283480000.0 606560.0 462520.0 442600.0 439130.0 542650.0 466900.0 432800.0 482990.0 595060.0 524770.0 True False 572912.9076526179 440299.84494332626 471130.7041850386 480864.7831707516 585353.4677438522 463985.90391223883 476551.64772095246 481314.620420713 487012.1042418759 520120.94606488245 1.1014993954524375 0.8465335769969184 0.9058099039262061 0.9245249336887236 1.1254179862828142 0.892073098425763 0.9162323711944973 0.9253898041642634 0.9363439560096539 1.0 18.98848761307357 -9.785081426782108 22.632969952979725 0.9999999999510525 0.9487487280324417 0.02532898481676038 0.08508361962433278 0.0 0.0 0.0810310362864112 0.019652913033066523 1.6402822044207542e-10 9.785081426782108 -0.051251271918610786 KAS(ph)SPSPLTIGTPESQR ddPTM_KYSE-520_SHP099_60min_R1 3 KASSPSPLTIGTPESQR 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 KAS(0.496)S(0.496)PS(0.007)PLTIGTPESQR;KAS(0.498)S(0.498)PS(0.004)PLTIGTPESQR;KAS(0.546)S(0.369)PS(0.085)PLTIGTPESQR 94.632 0.00088069 2113160000.0 883750.0 871930.0 764470.0 708330.0 600370.0 808940.0 715290.0 790300.0 1096890.0 829410.0 True False 834726.6257880518 830041.1740063877 813748.9593952474 775649.47023282 647615.7033619756 803891.1053989438 787598.4937576714 787558.6337574059 897722.4263467069 822062.0726712164 1.0154058355662645 1.0097062029747266 0.989887487146857 0.9435412434397041 0.7877941640801003 0.977895869574389 0.9580766707779637 0.9580281829549747 1.0920372757614751 1.0 19.64888780819035 -9.170807075483317 8.239917994004177 1.0000000042694381 0.9653543711106557 0.010726816301357078 0.073068483625535 0.0 0.0 0.07424531687763945 0.01800713433493889 6.748277365535692e-10 9.170807075483317 -0.03464563315878244 KAS(ph)VVDPSTESSPAPQEGSEQPASPASPLSSR ddPTM_KYSE-520_SHP099_60min_R1 1 KASVVDPSTESSPAPQEGSEQPASPASPLSSR 32 1 Q66K14;Q66K14-2 Q66K14 TBC1D9B TBC1 domain family member 9B 1 KAS(0.941)VVDPS(0.013)T(0.013)ES(0.016)S(0.016)PAPQEGSEQPASPASPLSSR 64.148 0.0021989 0.0 100510.0 101150.0 75573.0 57468.0 54956.0 83849.0 68640.0 85594.0 81820.0 90222.0 True False 94934.5099382825 96290.60217075462 80444.5565010753 62929.741441615806 59280.72454313299 83325.66728879274 75578.8010618441 85297.09439178972 66963.55051435194 89422.70327165395 1.0616376654358617 1.076802631186813 0.8995987993865018 0.703733382454832 0.6629270014690368 0.9318178073375925 0.8451858230257928 0.9538639659848888 0.7488428336920863 1.0 16.44835353913678 -4.860957075173039 4.050089865209858 0.8288171738350179 1.0703459946663696 0.44260517597644533 0.1030565525340473 0.18993209161774297 5.679425342311881 0.028151030543634777 0.06512815339425167 1.3773455963424402e-05 4.860957075173039 0.24152882083135174 KASDVHEVR ddPTM_KYSE-520_SHP099_60min_R1 8 KASDVHEVR 9 1 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BR70;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;;;;;; 115.82 0.0016942999999999997 41469800000.0 43445000.0 55724700.0 38942200.0 66425000.0 48687200.0 43281500.0 34687300.0 36772300.0 38699200.0 32906200.0 False True 41035019.244539626 53047601.76752001 41452476.52172298 72738012.02859555 52518605.64772597 43011364.10404274 38193830.79942468 36644745.47401931 31672400.807443265 32614676.66863617 1.2581764848216588 1.6264947927119302 1.2709761602998095 2.230223306139469 1.6102752199972097 1.3187732793133748 1.1710626840631442 1.1235661124691954 0.9711088394109686 1.0 24.95901799039127 -6.580806994071871 2.1722198462165823 1.0600175458793268 1.6139543410422599 0.49427805055943164 0.25475696804401454 0.2828879526853587 2.704785577684112 0.11793172927391378 0.0873813515382588 2.6253850382826417e-07 6.580806994071871 0.553936795162933 KASGS(ph)ENEGDYNPGR ddPTM_KYSE-520_SHP099_60min_R1 1 KASGSENEGDYNPGR 15 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KAS(0.051)GS(0.949)ENEGDYNPGR 174.0 2.3731e-08 396610000.0 266150.0 279820.0 208340.0 229540.0 251820.0 225110.0 257810.0 259100.0 297610.0 252080.0 True False 251386.12894312872 266377.027181617 221769.92975578617 251355.41258628224 271636.80134019535 223705.0049896855 283871.95078312984 258201.2425743946 243571.52613757396 249846.76731527253 1.0061612229143382 1.0661615919388123 0.8876237709169268 1.0060382821327682 1.0872135919910733 0.8953688190305872 1.1361842053570466 1.0334383964575369 0.9748836407005416 1.0 17.930684026077166 -5.522039545500325 24.99993059857965 1.024523146366542 0.9866386173059776 0.042312873087983816 0.0726175231479291 102.59667651374778 3056407.793818461 0.021063730293793746 0.027519412216966813 3.0058025911622876e-06 5.522039545500325 -0.0378845290605645 KASIS(ph)YFK ddPTM_KYSE-520_SHP099_60min_R1 1 KASISYFK 8 1 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 KAS(0.192)IS(0.808)YFK 61.65 0.034787 705900000.0 829160.0 702450.0 636690.0 677330.0 632370.0 717530.0 705380.0 689020.0 884700.0 748250.0 True False 783164.8419105181 668703.2476010547 677732.056140018 741703.2395533095 682133.9213068832 713051.6291157614 776686.694245391 686629.9504384772 724060.7814720994 741621.0871296905 1.0560174939760885 0.901677769424207 0.9138521920446689 1.0001107741204298 0.9197876559132893 0.9614770150016878 1.0472823760330434 0.9258500902340218 0.9763217282216785 1.0 19.50032274033245 -6.541429256306623 24.99419515132031 0.9844979973565341 0.9535621349396204 0.06595758911046856 0.0507563567119697 693.634076902541 934565.214362729 0.018970029186711583 0.01469671588978862 2.8745558015726746e-07 6.541429256306623 -0.030935862416913706 KASPEAAS(ph)TPRDPIDVDLDVSNTTTAQK ddPTM_KYSE-520_SHP099_60min_R1 1 KASPEAASTPRDPIDVDLDVSNTTTAQK 28 2 P29590-12;P29590-13;P29590-11;H3BT57;H3BUJ5 P29590-12 PML Protein PML 1 KAS(0.123)PEAAS(0.437)T(0.437)PRDPIDVDLDVSNT(0.001)TT(0.001)AQK 63.823 0.024831 1163200000.0 484430.0 593080.0 482940.0 320230.0 349160.0 380940.0 358080.0 439900.0 605490.0 436870.0 True False 457557.7022127367 564587.546568771 514071.0851313206 350664.56291933963 376636.905551356 378562.41215748154 394278.2209240263 438374.0895734315 495548.2791607798 432999.67167971673 1.056716048854617 1.3038983248615206 1.1872320437036523 0.8098494891670978 0.8698318501958324 0.8742787510414058 0.91057394892361 1.0124120599742399 1.1444541683794378 1.0 18.724006405471435 -5.238713326881293 22.724907743606337 0.9388040815614612 1.194743966575555 0.5178070534630547 0.10431910895724823 197.416865004696 197405.23130277763 0.02969670283248775 0.05136333453805985 5.771473064156856e-06 5.238713326881293 0.2559398850140938 KASPEAAS(ph)TPRDPIDVDLPEEAER ddPTM_KYSE-520_SHP099_60min_R1 1 KASPEAASTPRDPIDVDLPEEAER 24 2 P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4;H3BVD2;H3BT29 P29590-2 PML Protein PML 1 KAS(0.293)PEAAS(0.354)T(0.354)PRDPIDVDLPEEAER 64.315 0.019698 923390000.0 402960.0 361460.0 308830.0 316960.0 320230.0 337710.0 282920.0 311250.0 518290.0 279920.0 True False 380607.0055191549 344094.9190374791 328737.675945471 347083.7831025009 345430.27914053935 335602.22662283626 311520.31463311415 310170.34639629646 424181.60102766403 277440.12657446455 1.371852767725005 1.2402492865253378 1.1848959269316013 1.251022292225433 1.2450624334898663 1.209638384924688 1.1228379920361033 1.1179721917876475 1.5289122242878384 1.0 18.081816936299475 -4.280204184718199 3.299282808009897 1.2116137397491475 1.3904795237942125 0.12659372418717674 0.12866837721859828 0.6381160824379762 11.54856175579524 0.03103837529954859 0.28338992400995344 5.245607786050369e-05 4.280204184718199 0.17886578404506492 KASPEAAST(ph)PRDPIDVDLPEEAER ddPTM_KYSE-520_SHP099_60min_R1 1 KASPEAASTPRDPIDVDLPEEAER 24 2 P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4;H3BVD2;H3BT29 P29590-2 PML Protein PML 1 KAS(0.032)PEAAS(0.186)T(0.783)PRDPIDVDLPEEAER 124.82 0.00029611 1389100000.0 742400.0 676440.0 610200.0 593570.0 576920.0 617120.0 529240.0 588130.0 828880.0 564140.0 True False 701217.5920622908 643942.8070428591 649534.4683545203 649982.7143366721 622320.3217742252 613268.3251709596 582740.7440846504 586089.9143005741 678376.2863644102 559142.1584942793 1.2540953698619475 1.1516620545604013 1.1616624833005966 1.162464150596368 1.1129912354491016 1.096802156400507 1.0422049835303424 1.0481948202204299 1.2132447465439165 1.0 19.092855600583796 -1.0000000000000002 0.2258924208677607 1.0477401917870721 2.0674169136349514 0.49888836764278754 0.053550192160354664 44.058762630050566 0.5710027873083713 0.07993999117536658 16.521642742414038 0.09999999999999995 1.0000000000000002 1.0196767218478793 KASS(ph)PNLHR ddPTM_KYSE-520_SHP099_60min_R1 4 KASSPNLHR 9 1 A0A087X030;P51956-2;P51956 A0A087X030 NEK3 Serine/threonine-protein kinase Nek3 1 KAS(0.162)S(0.838)PNLHR;KAS(0.112)S(0.888)PNLHR;KAS(0.19)S(0.81)PNLHR;KAS(0.156)S(0.844)PNLHR 144.1 0.00021834 4514830000.0 1596260.0 1893540.0 1737520.0 2521210.0 1703970.0 1730320.0 1561920.0 1520090.0 1993380.0 1590560.0 True False 1507712.2757345804 1802571.4961385163 1849523.319330295 2760825.0403705756 1838062.7447369248 1719520.4310503863 1719814.116470217 1514817.162581673 1631432.441020518 1576468.875836955 0.9563856913661735 1.1434234597124682 1.1732063649834978 1.7512715174315385 1.1659365896209581 1.0907417567235411 1.0909280499160883 0.9608925274705783 1.034864985935344 1.0 20.588265256555108 -6.24694607862924 3.431167971758493 1.0313498618360846 1.2617070419835585 0.22224478778343393 0.19253342867517398 0.3985900290229368 9.988822125405115 0.07394454333233859 0.06971655198189035 5.663095968487892e-07 6.24694607862924 0.23035718014747397 KASS(ph)PSPLT(ph)IGTPESQR ddPTM_KYSE-520_SHP099_60min_R1 1 KASSPSPLTIGTPESQR 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 2 KAS(0.467)S(0.532)PS(0.008)PLT(0.941)IGT(0.052)PESQR 84.181 0.0033669000000000004 623540000.0 298150.0 284400.0 262720.0 192630.0 258080.0 238970.0 212260.0 229750.0 280360.0 243720.0 True False 281611.0251527101 270736.99710689683 279655.3515668625 210937.49728367856 278389.42772566713 237478.49958857914 233717.31225796993 228953.0508740532 229453.69130046072 241560.8304112909 1.1657975536564773 1.120781861222821 1.1577015656499872 0.8732272402132752 1.1524609650151907 0.983100195442444 0.9675298427316784 0.9478070202202435 0.9498795434250823 1.0 17.882027012076936 -4.687133162878907 0.5335748758010396 0.9626333935879885 1.261294696881892 0.4551960784407051 0.07480357380476442 2.531020008549873 0.7585180140340446 0.04612373857114873 0.4462825759715002 2.0552603177860275e-05 4.687133162878907 0.2986613032939036 KASS(ph)PSPLTIGTPESQR ddPTM_KYSE-520_SHP099_60min_R1 1 KASSPSPLTIGTPESQR 17 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 KAS(0.028)S(0.971)PS(0.001)PLTIGTPESQR 197.29 1.7025e-12 536440000.0 1559000.0 1498800.0 1447900.0 1276100.0 1304500.0 1472000.0 1305700.0 1418000.0 1798400.0 1439800.0 True False 1472519.1622105497 1426795.398255333 1541233.9507219116 1397380.160326545 1407156.72841031 1462812.7019893252 1437692.8984039915 1413081.2889636864 1471855.893974708 1427044.4921474513 1.031866329545666 0.9998254477043366 1.0800181488403529 0.9792127491580401 0.9860636694604991 1.025064537257734 1.0074618600296872 0.9902152993402801 1.031401544993053 1.0 20.44459888493662 -5.2950240036028235 24.998789371782973 1.0027943512123159 1.0334955858752233 0.30306591654682835 0.02374626613627588 815.1203228170591 606733.9317832128 0.006579582417076353 0.00975934815656124 5.06962687501241e-06 5.2950240036028235 0.030701234662907417 KASTAPGAEAS(ph)PSPCITER ddPTM_KYSE-520_SHP099_60min_R1 1 KASTAPGAEASPSPCITER 19 1 Q66PJ3 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 KASTAPGAEAS(0.579)PS(0.418)PCIT(0.003)ER 74.51899999999999 0.009437000000000001 0.0 98367.0 100420.0 96491.0 72907.0 74698.0 77884.0 65869.0 70418.0 140610.0 74305.0 True False 92910.38642024706 95595.67246650708 102710.96425105858 79836.05935971111 80576.30762651845 77397.89706639704 72527.68133949031 70173.73639368473 115078.76848964844 73646.7155084152 1.2615686358698603 1.298030357587147 1.3946441948157535 1.0840410031671905 1.0940923443804014 1.0509348113094494 0.9848053757564107 0.9528427155134482 1.5625784217966792 1.0 16.168333565022607 -5.2730566088926984 23.721294661499826 1.0946066159135357 1.3160759892664702 0.2600007942994468 0.16479992060164714 474.13718531371484 968143.4133285679 0.0456497234496651 0.06843693375760203 5.332653815252475e-06 5.2730566088926984 0.22146937335293448 KASVVDPSTESSPAPQEGSEQPASPAS(ph)PLSSR ddPTM_KYSE-520_SHP099_60min_R1 4 KASVVDPSTESSPAPQEGSEQPASPASPLSSR 32 1 Q66K14;Q66K14-2 Q66K14 TBC1D9B TBC1 domain family member 9B 1 KASVVDPSTESSPAPQEGSEQPAS(0.001)PAS(0.716)PLS(0.142)S(0.142)R;KASVVDPSTESSPAPQEGSEQPASPAS(1)PLSSR;KASVVDPSTESSPAPQEGSEQPAS(0.014)PAS(0.734)PLS(0.126)S(0.126)R;KASVVDPSTESSPAPQEGSEQPASPAS(1)PLSSR 308.91 2.6845999999999997e-67 3612260000.0 1683070.0 2055660.0 1493540.0 1302520.0 1318960.0 1856330.0 1355490.0 1655390.0 2213410.0 1814220.0 True False 1589706.751983136 1956903.0079914324 1589815.9781484923 1426311.1091830833 1422754.6481441644 1844743.9558993487 1492516.157507563 1649647.8384609304 1811510.5395254425 1798147.4222418016 0.8840803219578088 1.0882884149463705 0.8841410656788214 0.7932114416986237 0.791233594390373 1.0259136337105519 0.830029918040202 0.9174152341771107 1.0074316027253098 1.0 20.778079875281293 -9.503589433171522 8.587292939934803 0.9999999859327607 0.9116314406700665 0.06913896977723366 0.09495881234719415 0.0 0.0 0.09455413492428935 0.022932746213632286 3.136249223732695e-10 9.503589433171522 -0.08836854526269422 KATKPMAES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KATKPMAESPK 11 2 Q9Y6X8 Q9Y6X8 ZHX2 Zinc fingers and homeoboxes protein 2 1 KATKPMAES(1)PK;KATKPMAES(1)PK 87.932 0.0024809999999999997 3180100000.0 4889100.0 4335100.0 4123400.0 3890300.0 4576400.0 4392500.0 3923500.0 4228400.0 5090500.0 4006000.0 True False 4617891.876820778 4126835.2888822425 4389200.961673271 4260032.94233865 4936536.643845876 4365084.778184857 4320125.669669954 4213732.667315981 4166193.521062195 3970509.9566208427 1.163047549879688 1.039371600617882 1.105450183887402 1.0729183376646687 1.2433004066931452 1.0993763586730363 1.0880531007021215 1.061257297765886 1.0492842397020183 1.0 21.92089288264706 -7.588916342341145 1.1594905551100803 1.0072806834032377 1.1180765099984542 0.36504878104424077 0.051982718540995274 0.5477607307130125 1.3758750176595382 0.04946296802638446 0.01688917767011329 2.5768174786583242e-08 7.588916342341145 0.11079582659521647 KATQAS(ph)QEY ddPTM_KYSE-520_SHP099_60min_R1 4 KATQASQEY 9 1 P16104 P16104 H2AFX Histone H2AX 1 KAT(0.003)QAS(0.996)QEY(0.001);KATQAS(0.999)QEY;KAT(0.004)QAS(0.991)QEY(0.005);KAT(0.005)QAS(0.995)QEY 84.352 0.0060504 3714970000.0 8248390.0 7477860.0 7376780.0 6837620.0 7496880.0 7280020.0 6958160.0 7300720.0 8982700.0 6989920.0 True False 7790835.3639421845 7118612.381103305 7852299.042065317 7487465.348994583 8086841.804587721 7234582.694793702 7661558.7178974515 7275395.506320864 7351668.115439613 6927994.746875468 1.124544063411113 1.0275141135627746 1.1334158481581862 1.080755055764359 1.1672701986725516 1.0442534902406653 1.1058840252950282 1.0501444894429335 1.0611538235872975 1.0 22.724006405471435 -7.950137528622025 0.7857756496337588 1.001202930393967 1.0990636894589862 0.3725908246507392 0.03944633304302714 0.70050011957386 0.9914132815412887 0.036261002248369624 0.013707163617471489 1.1216631994502641e-08 7.950137528622025 0.09786075906501934 KATSDTLES(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 6 KATSDTLESPPK 12 1 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 KATSDTLES(1)PPK;KATSDTLES(1)PPK;KATSDTLES(1)PPK;KATSDTLES(1)PPK;KATSDTLES(1)PPK;KATSDTLES(1)PPK 123.02 7.1891e-05 6319950000.0 8832440.0 7820260.0 6929310.0 6504370.0 7202460.0 8581040.0 7196720.0 8550230.0 8965490.0 9014630.0 True False 8342486.946167373 7444562.971150434 7375984.409888003 7122543.369189848 7769252.625608371 8527482.546384826 7924234.690818703 8520571.247768676 7337583.017610812 8934767.39147602 0.933710591517615 0.8332128465093253 0.825537374025525 0.7971716617922167 0.8695528697278031 0.9544157304554169 0.8868988238438765 0.9536422017989525 0.8212394006598358 1.0 23.090998739829633 -6.029199983979669 9.271493267093557 0.9174638116365911 0.8433929302989802 0.29804894310086394 0.055132945881364734 0.5096466133216212 156.19188495094534 0.017363218765765225 0.017724413465640115 9.349750375781237e-07 6.029199983979669 -0.07407088133761086 KATSDTLES(ph)PPKIIPK ddPTM_KYSE-520_SHP099_60min_R1 2 KATSDTLESPPKIIPK 16 2 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 KATSDT(0.012)LES(0.987)PPKIIPK;KATSDT(0.003)LES(0.997)PPKIIPK 139.98 1.0577e-05 1752310000.0 3745000.0 3714200.0 3366700.0 2471310.0 2819260.0 3280740.0 2296140.0 2871270.0 4297700.0 3244800.0 True False 3537257.384527582 3535764.2568721366 3583722.8689104584 2706182.559373556 3041119.722604866 3260263.6847312856 2528256.2393668806 2861310.234529456 3517346.0162005695 3216053.5964162033 1.0998751353115854 1.0994108620615657 1.1143231172838555 0.8414606530156028 0.9456060452455537 1.013746688912258 0.7861362267669397 0.8896960665450184 1.093683892619237 1.0 21.61686001895033 -5.243852656864691 24.482413996944334 0.9310905734396324 1.104023853198744 0.45369860544365725 0.08314517068923143 558.9001777459002 778041.2691287369 0.022680643014648224 0.039162006422668844 5.7035774479222875e-06 5.243852656864691 0.17293327975911166 KAVLFCLSEDKK ddPTM_KYSE-520_SHP099_60min_R1 3 KAVLFCLSEDKK 12 2 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 0 ;; 164.81 2.0328e-06 6249750000.0 4608580.0 4449650.0 3166010.0 2438330.0 4312560.0 4172700.0 2897160.0 3208390.0 3477970.0 3007090.0 False True 4352932.880423533 4235882.134939182 3370096.0703951055 2670068.1500893557 4651933.936890125 4146656.631515525 3190033.2063568267 3197260.843933854 2846458.3204888846 2980449.522080616 1.4604954213030263 1.421222571816 1.1307341545051506 0.8958608861878704 1.5608162132679455 1.3912856435900292 1.0703194879576095 1.0727445038900991 0.955043291087784 1.0 21.507098508859837 -6.869103591186449 5.592474573185942 1.022686777766611 1.2988883580592139 0.38265795936725455 0.17808398530603292 0.2662842344855239 12.126188002636836 0.08235431184838624 0.05516970350122972 1.3517500951369247e-07 6.869103591186449 0.2762015802926028 KAVPMAPAPAS(ph)PGSSNDSSAR ddPTM_KYSE-520_SHP099_60min_R1 3 KAVPMAPAPASPGSSNDSSAR 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 KAVPMAPAPAS(0.969)PGS(0.013)S(0.017)NDSSAR;KAVPMAPAPAS(0.96)PGS(0.032)S(0.007)NDSSAR;KAVPMAPAPAS(0.938)PGS(0.047)S(0.015)NDSSAR 144.44 8.701799999999998e-07 2193900000.0 849840.0 1134070.0 839690.0 584460.0 650030.0 845940.0 587680.0 687170.0 1174180.0 969430.0 True False 802697.6810859606 1079587.5749262255 893817.760951503 640006.9026756934 701183.6628352272 840660.174674489 647088.4296040882 684786.3676566833 960978.5106690504 960841.6044051284 0.8354110369553813 1.1235853755464873 0.9302446489136772 0.6660899150718306 0.7297598892684717 0.8749206641556226 0.6734600444416751 0.7126943343389517 1.0001424857783991 1.0 19.873939095473546 -5.0152575823540335 23.500764585043772 0.7907065668225276 0.9913524067148095 0.22024966100534304 0.1325288237304844 358.3387324940851 551943.1659699957 0.03419593237720012 0.06198934858664603 9.654780789865594e-06 5.0152575823540335 0.2006458398922819 KAVPVES(ph)PVQKV ddPTM_KYSE-520_SHP099_60min_R1 1 KAVPVESPVQKV 12 2 Q8TB61-5;Q8TB61-4;Q8TB61-3;Q8TB61-2;Q8TB61 Q8TB61-5 SLC35B2 Adenosine 3-phospho 5-phosphosulfate transporter 1 1 KAVPVES(1)PVQKV 97.836 0.0013154999999999998 443430000.0 436160.0 409680.0 338810.0 406490.0 400160.0 397360.0 312740.0 442960.0 515960.0 327200.0 True False 411965.33533659554 389998.35785778286 360650.23471516714 445122.68738432525 431650.3154010501 394879.9288467917 344354.81124826823 441423.47514764086 422274.67029314407 324301.26255774783 1.2703167791807086 1.2025804487527594 1.1120839674527838 1.372559218159266 1.331016450557872 1.217633029647783 1.061836172120821 1.361152502664208 1.3021061557475444 1.0 18.306975114888736 -6.508542242400721 24.830687391883025 1.2011361683358828 1.25507718717952 0.07599573364780732 0.11775586002036573 2475.200541140722 4287035.956338091 0.043790463387994284 0.037184337611509966 3.1006857803219593e-07 6.508542242400721 0.053941018843637334 KAVS(ph)PS(ph)SSEKR ddPTM_KYSE-520_SHP099_60min_R1 1 KAVSPSSSEKR 11 2 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 2 KAVS(0.988)PS(0.52)S(0.436)S(0.056)EKR 63.128 0.026444 517380000.0 1074000.0 969790.0 880920.0 1002700.0 915610.0 944780.0 908460.0 887540.0 1181800.0 869920.0 True False 1014423.0790340805 923199.8327155332 937705.512721834 1097996.3065272516 987663.2978917313 938883.2775716544 1000296.0025151947 884461.3308933923 967214.9107536199 862213.1855875194 1.1765339431023012 1.0707326774253132 1.0875564516945695 1.2734626712755124 1.1454977891792841 1.0889224303985694 1.1601492754179867 1.0258035317457048 1.121781627700986 1.0 19.71768509985773 -7.257079151192203 24.98176641861888 1.0553444333004074 1.1413360681181826 0.3265236098164809 0.06167773994268318 489.1375503748082 2802516.3314724555 0.030876760190462378 0.017031540313807835 5.532492690445078e-08 7.257079151192203 0.08599163481777516 KAVS(ph)PSSS(ph)EKR ddPTM_KYSE-520_SHP099_60min_R1 2 KAVSPSSSEKR 11 2 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 2 KAVS(0.995)PS(0.051)S(0.141)S(0.813)EKR;KAVS(0.919)PS(0.317)S(0.226)S(0.538)EKR 65.71600000000001 0.02365 2038520000.0 3799900.0 3634200.0 3349100.0 3574600.0 3474200.0 3546600.0 3578200.0 3415500.0 4251200.0 3622700.0 True False 3589111.9720871532 3459607.5769545916 3564988.3447494684 3914328.9092573253 3747599.7745060166 3524464.3538555293 3939919.375866708 3403652.4276836966 3479289.2440309543 3590605.6964179515 0.9995839909872899 0.9635164285529748 0.9928654511705255 1.0901583855788803 1.0437235640339693 0.9815793355899798 1.0972854467972457 0.9479326652545662 0.9689978622553714 1.0 21.77579580098003 -9.882391596720705 10.692571279883262 1.0000040573381443 1.010999725541173 0.0025525336100583607 0.04909498256093856 0.0 0.0 0.0491448818022526 0.011919384625246042 1.3110172416252236e-10 9.882391596720705 0.010995668203028552 KAVS(ph)PSSSEK ddPTM_KYSE-520_SHP099_60min_R1 5 KAVSPSSSEK 10 1 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 1 KAVS(0.888)PS(0.055)S(0.055)S(0.003)EK;KAVS(0.368)PS(0.368)S(0.25)S(0.014)EK;KAVS(0.744)PS(0.114)S(0.114)S(0.027)EK;KAVS(0.75)PS(0.116)S(0.067)S(0.067)EK;KAVS(0.402)PS(0.264)S(0.264)S(0.07)EK 99.941 0.0017924 4919500000.0 5116430.0 4630240.0 3944040.0 5819510.0 4669230.0 5226940.0 5041620.0 4823720.0 5603670.0 5719960.0 True False 4832611.428549657 4407796.320268065 4198279.129087117 6372594.480700519 5036671.8367154235 5194316.728625059 5551276.151069567 4806987.64118471 4586184.785025158 5669285.604461541 0.8524198224810813 0.7774870817584625 0.7405305398237847 1.1240559967000952 0.88841384754928 0.9162206829970433 0.9791844225841956 0.8479000665272126 0.808952856673155 1.0 22.434735519688317 KAVS(ph)PSSSEKR ddPTM_KYSE-520_SHP099_60min_R1 3 KAVSPSSSEKR 11 2 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 1 KAVS(0.639)PS(0.16)S(0.16)S(0.041)EKR;KAVS(0.469)PS(0.073)S(0.154)S(0.303)EKR;KAVS(0.886)PS(0.029)S(0.042)S(0.042)EKR 110.55 0.00022987 4495310000.0 1564720.0 1508780.0 1379830.0 1321150.0 1431080.0 1304380.0 1140780.0 1245150.0 1696130.0 1238350.0 True False 1477921.8624080126 1436295.9440750503 1468776.0496060601 1446711.6987817676 1543697.854268629 1296238.880584806 1256101.175339899 1240830.8652701953 1388155.547957807 1227379.1824217204 1.2041281810662219 1.170213707911454 1.1966766836537377 1.1786998830526734 1.2577187851783391 1.056103035760489 1.023401075502607 1.0109596798129927 1.1309916021378672 1.0 20.227149588569198 -6.329246384914417 7.158817661242 1.0427977738129086 1.1980540562115551 0.7954295232961042 0.039851171446477485 0.11925741476852716 10.950802169469409 0.013694582082056693 0.01207630255177812 4.6854748932193493e-07 6.329246384914417 0.15525628239864653 KAVSPS(ph)SSEK ddPTM_KYSE-520_SHP099_60min_R1 1 KAVSPSSSEK 10 1 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 1 KAVS(0.351)PS(0.503)S(0.117)S(0.028)EK 46.068999999999996 0.062297000000000005 1011000000.0 1832500.0 1631900.0 1429700.0 1446700.0 1715400.0 1777700.0 1723500.0 1818800.0 2009800.0 1785400.0 True False 1730847.5720018165 1553501.074468161 1521860.7496008803 1584193.9330337855 1850392.2207091216 1766604.7148956684 1897728.1997390522 1812491.0073111109 1644870.9829350347 1769582.7450201812 0.9781105613018831 0.877891174538122 0.8600110697753918 0.8952358613870405 1.0456658361505546 0.9983171003826222 1.0724156330521915 1.0242476721767766 0.9295247637127451 1.0 20.75497779253928 -5.75309139075545 24.998418544212594 1.0152746723429207 0.8979748452436734 0.5807575886991254 0.04518516534029718 126.50428801545415 378820.6078265869 0.013621290560588837 0.017284422292655723 1.765666223632905e-06 5.75309139075545 -0.11729982709924724 KAVSPS(ph)SSEKR ddPTM_KYSE-520_SHP099_60min_R1 4 KAVSPSSSEKR 11 2 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 1 KAVS(0.076)PS(0.561)S(0.181)S(0.181)EKR;KAVS(0.152)PS(0.697)S(0.068)S(0.083)EKR;KAVS(0.282)PS(0.546)S(0.137)S(0.035)EKR;KAVS(0.192)PS(0.381)S(0.381)S(0.046)EKR 115.1 0.00020289 12494670000.0 4928470.0 4721720.0 4462220.0 4195420.0 4469230.0 4263870.0 4010030.0 3870120.0 5298400.0 3986330.0 True False 4655077.944438634 4494881.483753785 4749861.84100444 4594151.45540098 4820932.974559769 4237257.60572773 4415402.966521374 3856695.4570127996 4336344.1217947 3951014.2175178123 1.1781982266222124 1.1376525712877976 1.2021879900975136 1.1627777584377341 1.2201760634484569 1.0724480785062191 1.1175365927423337 0.9761279622617335 1.097526833127664 1.0 21.913791607111673 -6.673290644721499 1.5317628542978512 1.0315630659624808 1.1772751736016736 0.6727315908710361 0.04433666412725016 0.22280167161806727 1.0675028116480894 0.022627003742809983 0.014658395527577181 2.121823989552136e-07 6.673290644721499 0.14571210763919273 KAVSPSSS(ph)EKR ddPTM_KYSE-520_SHP099_60min_R1 1 KAVSPSSSEKR 11 2 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 1 KAVS(0.03)PS(0.007)S(0.365)S(0.598)EKR 90.70700000000001 0.0021923000000000003 476670000.0 465080.0 456960.0 417060.0 360950.0 407030.0 462490.0 340290.0 381550.0 465210.0 438610.0 True False 439281.0852860057 435006.9556890559 443944.3549195939 395254.57947642554 439060.94531609723 459603.4283580451 374689.83411035757 380226.49210443924 380739.59098975407 434724.2566334163 1.0104821127026091 1.00065029510391 1.0212090725223841 0.9092075573085083 1.009975722809362 1.0572297757601512 0.8619022941393328 0.8746383168240538 0.8758186026661376 1.0 18.729741071429395 -6.770843029795775 24.99987496721598 0.8926429847137556 0.9985139232471757 0.4733484658801085 0.05029432306400333 166.33489152666732 442201.5628003072 0.02059584109390922 0.014093145292483783 1.694950307931221e-07 6.770843029795775 0.10587093853342011 KAVVLPGGTAT(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 2 KAVVLPGGTATSPK 14 1 Q8N1G0;F8WCX2;Q8N1G0-2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 KAVVLPGGT(0.006)AT(0.497)S(0.497)PK;KAVVLPGGT(0.001)AT(0.499)S(0.499)PK 122.46 0.0008689 1232960000.0 1834290.0 1630900.0 1537440.0 1191860.0 1424500.0 1419250.0 1446430.0 1580990.0 1984900.0 1525480.0 True False 1732538.277133539 1552549.1159691906 1636545.8423909766 1305134.0160542245 1536600.04570371 1410391.9343059429 1592649.2601964355 1575505.9146958415 1624492.1952571154 1511965.4340054793 1.145884845094455 1.0268416731301837 1.0823963336618487 0.8632036068421751 1.0162931050830766 0.9328202236538905 1.0533635388589604 1.0420250881807738 1.074424162564042 1.0 20.527993726899755 -4.0748560702669705 1.4653887561759484 1.0028213833170807 1.2527824876144664 0.30393445185964885 0.06288234388360112 2.3916831126572724 3.3634288262304564 0.018177317573789202 0.9880432277716096 8.416740350057401e-05 4.0748560702669705 0.24996110429738572 KAVVLPGGTATS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KAVVLPGGTATSPK 14 1 Q8N1G0;F8WCX2;Q8N1G0-2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 KAVVLPGGTAT(0.335)S(0.665)PK;KAVVLPGGTAT(0.144)S(0.856)PK 164.97 2.2164000000000002e-08 8936900000.0 12564900.0 10949400.0 10955400.0 9208700.0 10003600.0 11170000.0 9649000.0 11009300.0 13361000.0 11081600.0 True False 11867899.949492827 10423374.388615534 11661602.613259763 10083892.0793034 10790826.407301942 11100283.886698874 10624415.085165124 10971111.307889925 10934979.203400837 10983425.645354342 1.0805280913894648 0.9490094188441388 1.061745487228046 0.9181008188978439 0.9824645566628055 1.0106395076652575 0.967313425539411 0.9988788254355211 0.9955891318867356 1.0 23.388824754144217 -4.245828280930574 24.182715630512227 0.9871989428858259 1.0805282005573995 0.3744600812459936 0.03623281587554981 1979.5901480883826 3066450.955710247 0.008461969214780813 0.1976977465884326 5.67769055650223e-05 4.245828280930574 0.09332925767157363 KAWENS(ph)PNVR ddPTM_KYSE-520_SHP099_60min_R1 1 KAWENSPNVR 10 1 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3;H7C5N8;A0A2R8YET2;A0A2R8Y7F4 E7EPN9 PRRC2C Protein PRRC2C 1 KAWENS(1)PNVR 44.426 0.067488 0.0 65439.0 64850.0 43730.0 45831.0 33675.0 48380.0 49670.0 43236.0 46615.0 50558.0 True False 61808.96822058763 61734.50865816551 46548.90577047385 50186.764460407416 36325.03091545971 48078.04247435023 54691.12833248544 43086.02440735827 38150.89106852256 50110.095453528804 1.2334633901846814 1.23197747079562 0.9289326900932061 1.0015300111920504 0.7249044446372466 0.9594482317228259 1.0914193604601092 0.859827226777396 0.7613414167989961 1.0 15.612813665475022 -4.767611215351227 5.946198249590392 0.913988187024173 1.2361901534588733 0.5922407565477439 0.10519126933215037 0.09938881134271693 12.820763223389976 0.02834593525142722 0.0671586322560855 1.707610374400944e-05 4.767611215351227 0.32220196643470034 KAYILVT(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 2 KAYILVTPLK 10 1 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 KAYILVT(1)PLK;KAYILVT(1)PLK 68.044 0.023478 0.0 3167400.0 3334400.0 2754800.0 2053300.0 2447600.0 3041400.0 2330700.0 2915400.0 3179400.0 3008200.0 True False 2991698.0079446393 3174210.418963566 2932378.8158358457 2248445.0146528427 2640212.195061001 3022417.4944499503 2566309.9014399806 2905287.157859473 2602101.106151683 2981549.688344183 1.003403706347786 1.0646176487926915 0.9835082833935112 0.7541195853427238 0.8855167517021173 1.0137069008997344 0.8607302140469081 0.9744218482144221 0.8727344428718112 1.0 21.50763094919557 -5.0083618703847135 24.87812235447523 0.9059881845576483 1.0315237855151294 0.32916779241520044 0.073244725731833 407.7767845452403 1213225.37063468 0.01934860227430788 0.03746454682703819 9.809302546737458e-06 5.0083618703847135 0.12553560095748106 KAYS(ph)FDR ddPTM_KYSE-520_SHP099_60min_R1 5 KAYSFDR 7 1 Q58EX7-2;Q58EX7 Q58EX7-2 PLEKHG4 Puratrophin-1 1 KAYS(1)FDR;KAYS(1)FDR;KAYS(1)FDR;KAYS(1)FDR;KAYS(1)FDR 117.25 0.0017375 8036160000.0 16828200.0 14998400.0 12688900.0 13840800.0 14083200.0 15035700.0 14000600.0 14681300.0 16982000.0 13863700.0 True False 15894706.199814986 14277854.35094262 13506846.796957834 15156225.470611742 15191467.717553169 14941856.619090268 15415917.28068847 14630373.996941166 13898496.881382592 13740878.403795397 1.1567460050752414 1.0390787205422691 0.9829682208109112 1.1030026629465994 1.1055674368937798 1.087401851614024 1.1219018775706804 1.064733532093558 1.011470771587911 1.0 23.711970897500937 -7.736124014907663 3.6034551700088446 1.0015652338375445 1.0817585348206213 0.32916656988937587 0.04462564621037025 0.2896766088541826 7.417289217935508 0.041216709616789304 0.012174211332459809 1.836013985736332e-08 7.736124014907663 0.08019330098307687 KCAHILTK ddPTM_KYSE-520_SHP099_60min_R1 1 KCAHILTK 8 1 Q9Y678 Q9Y678 COPG1 Coatomer subunit gamma-1 0 66.071 0.055698000000000004 223120000.0 1157200.0 1112800.0 696710.0 893050.0 807740.0 873860.0 706050.0 977510.0 780580.0 628610.0 False True 1093007.8091789922 1059339.4176531471 741621.0413754138 977925.2034947259 871304.542588075 868405.9155980907 777424.4243839603 974119.2459625485 638846.3488204938 623041.00445118 1.7543111952026227 1.7002723899148349 1.1903246111846004 1.5696000688689082 1.3984706245066225 1.3938182389183935 1.2477901435536696 1.5634913898173104 1.025368064471513 1.0 19.248967589486522 -1.0000000040436106 0.09013730997945055 0.7334464879816911 3.3621663712919387 0.5545780319619662 0.1683466426791759 124.63529303455458 0.8094106047036045 3.0819716634757643 40.51409788722928 0.09999999906892426 1.0000000040436106 2.6287198833102474 KCDSWWAK ddPTM_KYSE-520_SHP099_60min_R1 2 KCDSWWAK 8 1 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 ; 109.29 0.002779 2024810000.0 6225000.0 6441100.0 3842000.0 3392900.0 5162900.0 5202200.0 4139400.0 4011400.0 4148400.0 4293000.0 False True 5879686.840770157 6131659.8877118 4089661.467417353 3715360.195887417 5569190.857117363 5169731.140141894 4557850.948650903 3997485.3896677946 3395155.1326538436 4254967.359903458 1.3818406449311902 1.441059206585999 0.9611499035118672 0.8731818323447059 1.3088680560980201 1.2149872614438086 1.0711835281280084 0.9394867343373686 0.7979274211708354 1.0 22.020716634282174 -1.0000000000005171 0.41178443881089466 0.9890828739810509 9.01838372019256 0.4000471282175595 0.16452220992643585 84.9315424793632 1.1068658517666239 0.1253127056079622 558.1994427533249 0.09999999999988092 1.0000000000005171 8.029300846211509 KCEDPDS(ph)PVTK ddPTM_KYSE-520_SHP099_60min_R1 6 KCEDPDSPVTK 11 1 Q9BUB4-2;Q9BUB4 Q9BUB4-2 ADAT1 tRNA-specific adenosine deaminase 1 1 KCEDPDS(0.999)PVT(0.001)K;KCEDPDS(0.998)PVT(0.002)K;KCEDPDS(0.998)PVT(0.002)K;KCEDPDS(0.79)PVT(0.21)K;KCEDPDS(0.982)PVT(0.018)K;KCEDPDS(0.999)PVT(0.001)K 164.68 1.8589e-05 2748070000.0 3906350.0 3728850.0 3561460.0 3735410.0 4046690.0 4104540.0 4064610.0 4543600.0 5452920.0 4570860.0 True False 3689656.978384332 3549710.4488820396 3791037.4101374773 4090422.243308034 4365141.480483495 4078922.043358194 4475500.445570837 4527839.312084215 4462807.184926916 4530365.7364752665 0.814428060118381 0.783537280511882 0.836806039656965 0.9028900714074535 0.9635295988000474 0.9003516008691372 0.9878894345190072 0.9994423354453017 0.9850876164358172 1.0 22.11119609308357 -5.408363911640704 0.6621843875463598 0.994238564327356 0.7641096846103362 0.8881015899188054 0.02607286820382247 0.3321628206031151 0.26682419673194063 0.015720367312128853 0.04751790886342326 3.905135327158944e-06 5.408363911640704 -0.23012887971701979 KCEDPDS(ph)PVTKK ddPTM_KYSE-520_SHP099_60min_R1 4 KCEDPDSPVTKK 12 2 Q9BUB4-2;Q9BUB4 Q9BUB4-2 ADAT1 tRNA-specific adenosine deaminase 1 1 KCEDPDS(0.999)PVT(0.001)KK;KCEDPDS(0.996)PVT(0.004)KK;KCEDPDS(0.997)PVT(0.003)KK;KCEDPDS(1)PVTKK 139.34 2.8211999999999997e-05 7820800000.0 5732700.0 5528090.0 5021950.0 4841030.0 5388500.0 5658700.0 5500550.0 5764900.0 7738000.0 5681000.0 True False 5414695.703145876 5262512.25856774 5345672.932404097 5301120.035691262 5812544.293628939 5623381.954311814 6056599.274194734 5744902.907437777 6332974.259106036 5630670.759751118 0.9616431033138957 0.934615516180589 0.9493847465946281 0.9414722085305478 1.0323005094131734 0.9987055173796691 1.0756443650529557 1.02028748484163 1.1247282125559692 1.0 22.42487536447604 -6.001012363537398 1.2578579690501486 1.0545828703901825 0.9425018743985167 0.6163248172896711 0.03628692821785583 0.2737700458680087 0.9028770044897384 0.014971279837441969 0.017027869026572794 9.97671661604731e-07 6.001012363537398 -0.11208099599166577 KCEES(ph)DSESPATFSTEEPSFYPCTK ddPTM_KYSE-520_SHP099_60min_R1 1 KCEESDSESPATFSTEEPSFYPCTK 25 1 Q9H582;Q9H582-2 Q9H582 ZNF644 Zinc finger protein 644 1 KCEES(0.985)DS(0.014)ESPATFSTEEPSFYPCTK 212.39 2.6273e-21 624590000.0 292740.0 267510.0 225930.0 236530.0 247780.0 239800.0 235440.0 256140.0 304380.0 234700.0 True False 276501.1286372779 254658.4180593041 240493.80930078131 259009.74008466257 267278.8763246508 238303.31925070653 259240.57287296889 255251.5101235256 249112.26479538577 232620.74059383688 1.1886348909878917 1.094736511495962 1.0338450848658034 1.1134421609331118 1.14898987786875 1.024428512446324 1.1144344748072619 1.0972861210566034 1.070894470370308 1.0 17.827620208470158 -13.999999999870358 0.13068581058570655 0.6813396415310231 1.1360347253739858 0.3531887882447472 0.04429273706638143 182.1016057513661 1.4963184227634847 15.237020529791256 0.3406232671699661 1.0000000002985119e-14 13.999999999870358 0.45469508384296264 KCEGPCR ddPTM_KYSE-520_SHP099_60min_R1 3 KCEGPCR 7 1 P00533;E9PFD7;Q504U8;P00533-3;P00533-4;P00533-2;A0A1W2PRR9 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 0 ;; 91.853 0.017284 2014190000.0 827990.0 1144100.0 510940.0 685530.0 1637630.0 1895170.0 1038460.0 1277890.0 1374280.0 2084880.0 False True 782059.7441428563 1089135.7186708886 543876.0099329042 750682.5650878896 1766502.1641598889 1883341.541052384 1143437.6711929287 1273457.2978517674 1124745.3947795592 2066409.5852120966 0.37846308386272104 0.5270667182658754 0.2631985516448718 0.36327868901694016 0.8548654520389165 0.9114076679329174 0.5533451254658045 0.6162656749973697 0.544299350345936 1.0 20.978694809968744 -5.750131344921266 24.999321350312847 0.72607841334283 0.3847346517846441 0.5711561648064771 0.15376427921163052 179.91496998696192 397746.4801529245 0.04741041670911511 0.06065265989029783 1.7777416812325983e-06 5.750131344921266 -0.34134376155818585 KCEPIIMTVPR ddPTM_KYSE-520_SHP099_60min_R1 1 KCEPIIMTVPR 11 1 Q9ULV4-3;Q9ULV4;Q9ULV4-2;H0YHL7;B4E3S0;J3QLV6;Q6QEF8;Q6QEF8-2;Q6QEF8-5;Q6QEF8-3;Q6QEF8-4;J3KSS5 Q9ULV4-3 CORO1C;CORO6 Coronin-1C;Coronin;Coronin-6 0 91.914 0.053095 0.0 364360.0 330930.0 294810.0 313160.0 398930.0 383100.0 301090.0 411060.0 401250.0 273720.0 False True 344148.22446634754 315031.62606394273 313813.92431267776 342922.63224501256 430323.52139879286 380708.9307962705 331527.1155552255 409634.1288021255 328393.1146893631 271295.0537509376 1.2685385144629022 1.1612140424541522 1.1567255649296675 1.2640209524786719 1.5861827020033008 1.403302144777694 1.2220168077947489 1.5099211103870331 1.2104648063021615 1.0 18.04950321909292 -5.5274597250506465 24.96620747548695 1.3536866487360355 1.1951162117998602 0.09418876704698509 0.15870823585430338 214.4398114281822 1168682.1127718957 0.04472167251042433 0.05796008114062617 2.9685220210353795e-06 5.5274597250506465 -0.15857043693617534 KCHS(ph)LGYNFIHK ddPTM_KYSE-520_SHP099_60min_R1 2 KCHSLGYNFIHK 12 1 Q86X27;Q86X27-3 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 KCHS(1)LGYNFIHK;KCHS(0.996)LGY(0.004)NFIHK 124.92 5.9875e-05 3810000000.0 5462300.0 5428900.0 6122800.0 5594100.0 5163700.0 4888500.0 5254600.0 4538900.0 6201700.0 3972400.0 True False 5159295.330174907 5168087.495054972 6517485.484826378 6125761.582072503 5570053.8125659805 4857989.058202991 5785786.247954059 4523155.615287226 5075627.612134642 3937207.62648043 1.3103945282121006 1.3126276247907345 1.6553573250726743 1.5558645017531059 1.4147218894689568 1.2338666179374622 1.469515148005065 1.1488232382935288 1.2891440060202959 1.0 21.908741363557336 -7.772040094503846 0.5989598278540008 1.0067820454240137 1.45456900073893 0.5205858658664679 0.126922463295428 0.6438474846416841 0.5522773366355316 0.13536013636905933 0.0637007234237852 1.69028487563814e-08 7.772040094503846 0.4477869553149163 KCLELFSELAEDKENYK ddPTM_KYSE-520_SHP099_60min_R1 1 KCLELFSELAEDKENYK 17 2 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 166.57 2.3119e-08 8681500000.0 1137900.0 896220.0 663230.0 626170.0 981870.0 816650.0 790520.0 816820.0 601030.0 634050.0 False True 1074778.4186525885 853164.245946355 705982.8670055197 685681.008535125 1059137.5829239022 811552.9844290644 870433.4763317177 813986.6420672218 491898.1027333289 628432.8102834362 1.7102519172540358 1.3576061465688913 1.1234023040380512 1.091096768524655 1.6853632808353995 1.2913918101491824 1.3850859822852568 1.2952643922269065 0.7827377798932437 1.0 19.26139897969894 -7.686082982970115 5.72710632669025 0.8943278239763441 1.362112958219682 0.48504716758398514 0.19680313754775283 0.168277915796036 9.209323032611625 0.14500245634179457 0.051501118893254684 2.0602362153023726e-08 7.686082982970115 0.4677851342433379 KCLELFSELAEDKENYKK ddPTM_KYSE-520_SHP099_60min_R1 2 KCLELFSELAEDKENYKK 18 3 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ; 258.87 4.8795999999999994e-30 5499900000.0 6652700.0 5094900.0 4488330.0 3621710.0 5091760.0 3768510.0 3212990.0 3499350.0 4292440.0 2624820.0 False True 6283661.469171339 4850133.356399192 4777654.933381913 3965916.229493183 5492452.543848585 3744989.3312321906 3537790.3849605885 3487211.5716044265 3513041.099606756 2601566.1368790613 2.415337968962596 1.8643129181476807 1.8364533830815355 1.5244341372965626 2.1112100384415142 1.4395134062303039 1.3598694781615883 1.3404277993054674 1.3503562526460062 1.0 21.310948953223292 -1.0000000000388571 0.14718124623332118 0.8596970372398872 5.917496172747241 0.771747022072927 0.19258219322329315 34.06818881546525 0.3308978682597016 0.7319521997001868 36.63982921443921 0.09999999999105282 1.0000000000388571 5.057799135507354 up KCLELFTELAEDKENYKK ddPTM_KYSE-520_SHP099_60min_R1 3 KCLELFTELAEDKENYKK 18 3 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;; 237.24 8.0009e-24 6365540000.0 5596800.0 4411260.0 4119760.0 3005330.0 4752050.0 3569520.0 2931210.0 3142860.0 4058490.0 2228470.0 False True 5286334.34705581 4199336.4481637515 4385326.321449066 3290955.6596145895 5126009.299534083 3547241.30163379 3227525.312652803 3131958.152209037 3321570.522207187 2208727.489523427 2.3933845945823005 1.9012469705213992 1.9854537702137618 1.4899781323067034 2.3207975288251212 1.6060112976631498 1.4612600820888049 1.417992109513163 1.503838992343902 1.0 21.074784000799013 -1.0000000223122139 0.08354518635965838 0.356132458954649 5.456279875204308 0.6784965958139837 0.2341607280968501 107.1222262771741 0.6507594231173823 5.69663030147726 62.858271091522234 0.09999999486242303 1.0000000223122139 5.1001474162496585 KCLVS(ph)RHTVR ddPTM_KYSE-520_SHP099_60min_R1 1 KCLVSRHTVR 10 2 P40394-2 P40394-2 1 KCLVS(0.5)RHT(0.5)VR 54.7 0.045295 1099700000.0 302660.0 309420.0 297160.0 137440.0 241710.0 338600.0 209660.0 345250.0 419930.0 465140.0 True False 285870.84646224795 294554.9987511112 316315.4090728112 150502.25627715708 260731.20185822633 336486.6718027075 230854.47888441524 344052.40833195555 343681.29757384286 461019.221473444 0.6200844414872513 0.6389212966212048 0.6861219540084443 0.32645549093624165 0.5655538635133571 0.7298755803007013 0.5007480558979537 0.7462864720311319 0.745481493104382 1.0 18.814467377252626 -8.03923106786338 0.9370903334604547 0.998102118028974 0.5774117934486125 0.5789863599499262 0.10921694898427153 0.46301540003405606 0.911790907071486 0.10695445692416977 0.036664166234312096 9.136270137570002e-09 8.03923106786338 -0.4206903245803615 KCQEQAVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 KCQEQAVSPK 10 1 Q5T7V8-3;Q5T7V8-4;Q5T7V8 Q5T7V8-3 GORAB RAB6-interacting golgin 1 KCQEQAVS(1)PK;KCQEQAVS(1)PK;KCQEQAVS(1)PK;KCQEQAVS(1)PK 127.76 0.00015568 818310000.0 2207430.0 1992130.0 1976540.0 1956520.0 2175320.0 2078540.0 2127890.0 2269500.0 2938790.0 2327090.0 True False 2084979.4574973932 1896425.084551906 2103950.930975818 2142467.072550811 2346505.3081222833 2065567.0608647352 2342997.8874051236 2261627.63420528 2405179.8168671774 2306473.7930486253 0.9039684143740182 0.8222183535175877 0.9121937293702701 0.9288928749192352 1.017356154314134 0.8955519317366849 1.0158354690465492 0.9805563978318309 1.0427952071755757 1.0 21.137257469421833 -5.4232011051280935 0.6008533806656094 1.0078885836718905 0.8398243081105577 0.5869097361188952 0.0427130351620519 0.8445287101349598 0.5467346508701804 0.027122537210287692 0.08364044928893981 3.773973921905336e-06 5.4232011051280935 -0.16806427556133274 KCQTLFGFDS(ph)DDES(ph)A ddPTM_KYSE-520_SHP099_60min_R1 1 KCQTLFGFDSDDESA 15 1 A0A1B0GWA0;Q8IZM8 A0A1B0GWA0 ZNF654 Zinc finger protein 654 2 KCQTLFGFDS(1)DDES(1)A 71.08 0.017694 0.0 211420.0 219920.0 197790.0 201010.0 213340.0 203130.0 184610.0 185270.0 240350.0 191980.0 True False 199692.11114467905 209354.71309334988 210539.85987518914 220113.92996414 230128.6442614454 201862.19032275246 203272.1804199745 184627.341612343 196708.4987304387 190279.20655817987 1.0494689081206625 1.1002500844953726 1.1064785463608413 1.1567944493022566 1.2094261292343635 1.0608736181640057 1.0682837294563865 0.9702969912053488 1.0337887270425055 1.0 17.537758388994416 -6.8298779888504555 2.1041826416610947 1.0038747586167924 1.1227659448438838 0.5636652173775661 0.04459052601295478 0.2459632591581326 2.2190875384500415 0.02430889450974236 0.01485811176318476 1.4795239888148457e-07 6.8298779888504555 0.11889118622709138 KCS(ph)LPAEEDSVLEK ddPTM_KYSE-520_SHP099_60min_R1 13 KCSLPAEEDSVLEK 14 1 E7EVA0;P27816-6;P27816 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KCS(1)LPAEEDSVLEK;KCS(1)LPAEEDSVLEK;KCS(1)LPAEEDSVLEK;KCS(1)LPAEEDSVLEK;KCS(0.999)LPAEEDS(0.001)VLEK;KCS(1)LPAEEDSVLEK;KCS(1)LPAEEDSVLEK;KCS(0.888)LPAEEDS(0.112)VLEK;KCS(1)LPAEEDSVLEK;KCS(0.987)LPAEEDS(0.013)VLEK;KCS(1)LPAEEDSVLEK;KCS(1)LPAEEDSVLEK;KCS(1)LPAEEDSVLEK 256.71 1.5951e-20 70371110000.0 53955490.0 52214210.0 48310160.0 44815510.0 45433390.0 43381690.0 45049440.0 50953930.0 58782760.0 48728820.0 True False 50962471.41209731 49705760.97647291 51424310.21258904 49074762.59612558 49008739.31237239 43110928.78108922 49603477.03536548 50777182.70956662 48109292.57679087 48297120.56524834 1.0551865373267573 1.0291661365054159 1.0647489873255682 1.0161012089701427 1.0147341857815864 0.8926190273154547 1.0270483303109608 1.051350103594018 0.9961109899252955 1.0 25.525433843540334 -5.55683426476142 2.826573762481186 0.9958414981795523 1.0473263475735446 0.2579131343177299 0.03977263922830325 0.4145672811001236 6.729868462408466 0.013122954328451529 0.018694449799088568 2.774378659624815e-06 5.55683426476142 0.05148484939399234 KCS(ph)NPDVASGPGK ddPTM_KYSE-520_SHP099_60min_R1 3 KCSNPDVASGPGK 13 1 O15021;H7C2V7;H7C3S4;E7EX28;O15021-4 O15021 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 KCS(1)NPDVASGPGK;KCS(1)NPDVASGPGK;KCS(1)NPDVASGPGK 152.32 3.2186e-06 1157960000.0 2146530.0 2100020.0 1982170.0 1652350.0 1861620.0 1985890.0 1880930.0 1750180.0 2092660.0 1857120.0 True False 2027457.701898529 1999131.8870057175 2109943.849784133 1809388.8472028556 2008118.902831124 1973495.3238815065 2071072.7605077864 1744109.034075081 1712685.6956656547 1840667.361617498 1.1014796829541693 1.0860907998330387 1.1462928575698796 0.9830069706961304 1.0909732767068117 1.072162936679273 1.1251749249727654 0.9475416745274574 0.93046996506779 1.0 20.811797501224 -7.270766744257466 24.96519270870139 0.9542543495246143 1.0843873535716442 0.6407513689399436 0.043549034275737884 415.11630938186886 1111074.744043162 0.02311775716146413 0.011333764987567494 5.360845064743827e-08 7.270766744257466 0.13013300404702988 KCS(ph)PEEIQR ddPTM_KYSE-520_SHP099_60min_R1 2 KCSPEEIQR 9 1 Q9NY74 Q9NY74 ETAA1 Ewings tumor-associated antigen 1 1 KCS(1)PEEIQR;KCS(1)PEEIQR 56.086999999999996 0.049419 0.0 502420.0 438050.0 428850.0 389450.0 456270.0 431920.0 409480.0 416910.0 500000.0 420070.0 True False 474549.7610505606 417005.42047354474 456494.3571842612 426463.210907588 492175.85317882185 429224.22706741054 450874.23453968466 415463.8365175252 409212.6039742846 416348.50660951494 1.1397897518955953 1.001577798055238 1.0964236689634588 1.0242938407067699 1.1821246992977061 1.0309253432004537 1.0829250672983697 0.997875169292202 0.9828607464132856 1.0 18.66743212363875 -7.282943824351732 6.230149930579918 0.9920067644481326 1.0773677465597502 0.37272795267147363 0.051145303478974634 0.19070426307311575 29.207079495266886 0.02608311850392287 0.012898770204440791 5.2126213158966887e-08 7.282943824351732 0.08536098211161758 KCS(ph)QTQCPR ddPTM_KYSE-520_SHP099_60min_R1 4 KCSQTQCPR 9 1 P29590-12;P29590-13;P29590-11;H3BT57;H3BUJ5;H3BRN3;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4;H3BVD2 P29590-12;P29590-2 PML Protein PML 1 KCS(0.964)QT(0.036)QCPR;KCS(0.953)QT(0.047)QCPR;KCS(0.988)QT(0.012)QCPR;KCS(0.999)QT(0.001)QCPR 167.2 6.6803e-05 9277660000.0 4855837.0 4585560.0 5064180.0 5448790.0 5285680.0 6438110.0 7996600.0 9044220.0 10171260.0 9697860.0 True False 4586474.041738931 4365262.814534111 5390625.1457744865 5966641.363361545 5701632.9445947185 6397927.367394361 8804974.3672952 9012847.711756825 8324415.580598967 9611944.505220909 0.4771640160060955 0.4541498145524078 0.5608256625749833 0.6207527894195239 0.5931820498441048 0.6656225869717834 0.91604506897773 0.9376716341694782 0.8660490680192134 1.0 23.196396888383536 -6.4959012720760825 0.7501801486789894 0.9790972937265191 0.48430955823259425 0.9223038607484043 0.05348899550280111 0.18080197750180083 0.21298316536699774 0.04386326621304447 0.034272834255162775 3.192263468106326e-07 6.4959012720760825 -0.49478773549392485 KCS(ph)VIR ddPTM_KYSE-520_SHP099_60min_R1 1 KCSVIR 6 1 C9J712;C9J0J7;C9JQ45;C9J2N0;G5E9Q6;P35080-2;P35080 C9J712 PFN2 Profilin;Profilin-2 1 KCS(1)VIR 57.96 0.044493 0.0 165400.0 173200.0 183310.0 143340.0 159060.0 167030.0 164080.0 182230.0 220430.0 175550.0 True False 156224.9322832744 164879.2120214998 195126.45590637025 156962.99050325755 171577.11707239877 165987.5038133675 180666.80766648313 181597.8866628016 180405.4685881032 173994.76357583317 0.8978714593050724 0.9476101960369602 1.1214501626155382 0.9021133008686634 0.986105061705603 0.9539798807854594 1.0383462349873653 1.0436974247426403 1.03684424105945 1.0 17.408684362827742 -6.768971850929426 24.95009854889771 1.0333634422188593 0.9720304040344453 0.2031407081397506 0.05923794046165618 292.60541248438057 969197.5030811593 0.0247037389928563 0.017018677574886353 1.7022688384470345e-07 6.768971850929426 -0.061333038184414046 KCSLPAEEDS(ph)VLEK ddPTM_KYSE-520_SHP099_60min_R1 2 KCSLPAEEDSVLEK 14 1 E7EVA0;P27816-6;P27816 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KCS(0.305)LPAEEDS(0.695)VLEK;KCS(0.003)LPAEEDS(0.997)VLEK 226.74 2.7602999999999997e-14 2250940000.0 3025500.0 3085300.0 2580600.0 2506100.0 2514600.0 2595900.0 2343500.0 2821600.0 3408000.0 2750300.0 True False 2857669.4838152784 2937077.556870283 2746949.6051059864 2744278.9905135627 2712484.7138831466 2579698.0251997877 2580403.8503559385 2811812.528166393 2789193.1086887224 2725934.481701025 1.048326547464211 1.0774571350069653 1.0077093281390417 1.0067296220564665 0.9950659974008307 0.9463536422159408 0.9466125718273782 1.0315040757735963 1.0232062169550837 1.0 21.37831945646328 -4.888447147177505 3.942773008823468 0.9912362846262431 1.0627814186488895 0.5022377143692872 0.02735662976839146 0.18844585214225687 5.381285897935877 0.008140984317664331 0.018651628254807717 1.292864030356675e-05 4.888447147177505 0.0715451340226464 KCYEMASHLR ddPTM_KYSE-520_SHP099_60min_R1 2 KCYEMASHLR 10 1 P07737;K7EJ44;CON__P02584 P07737 PFN1 Profilin-1 0 ; 173.64 6.985e-05 1270950000.0 2142300.0 2138300.0 1530090.0 1290130.0 2011540.0 1816770.0 1344730.0 1322870.0 1663500.0 1199370.0 False True 2023462.348430826 2035572.8583462671 1628722.049630558 1412743.5673082701 2169836.7539030123 1805430.864533386 1480668.4317000841 1318281.2727301777 1361450.3334224443 1188744.514895739 1.7021843828303995 1.7123720301874963 1.3701195077845705 1.1884333005163665 1.8253179945005438 1.5187711420832377 1.2455733028807698 1.1089693842631947 1.1452842190753265 1.0 20.181007253542738 -6.88527288557919 2.8725284784645093 1.1014969133115344 1.5499268002604543 0.6033285926026806 0.1735862145231907 0.20841356754119894 3.453081319926582 0.08881457335066835 0.05560137136066413 1.3023482008851657e-07 6.88527288557919 0.44842988694891983 KDAENHEAQLK ddPTM_KYSE-520_SHP099_60min_R1 5 KDAENHEAQLK 11 1 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 0 ;;;; 201.0 6.3327e-07 14774800000.0 20046810.0 18963220.0 12828420.0 11547440.0 17838410.0 18987140.0 13649970.0 17830230.0 16776630.0 15040620.0 False True 18934773.48697502 18052198.44682649 13655360.479397714 12644905.22573558 19242191.38033097 18868634.216338012 15029842.178469418 17768381.093736984 13730416.896426205 14907371.80822528 1.2701617515521808 1.2109578186589554 0.916013946325753 0.848231692910392 1.2907836222152795 1.265725069386615 1.0082154233368328 1.1919190936079769 0.9210487987460217 1.0 23.829522594974435 -7.769107508821768 24.999635495715648 0.9605243380527387 1.1181984295792657 0.16502603939089033 0.1475314201006028 390.15954747241796 1271945.02345975 0.14171263557025585 0.0393745847432092 1.7017371942523675e-08 7.769107508821768 0.157674091526527 KDAHSNLLAK ddPTM_KYSE-520_SHP099_60min_R1 1 KDAHSNLLAK 10 1 F8WBI5;O75323-2;O75323 F8WBI5 GBAS Protein NipSnap homolog 2 0 118.28 0.0011091 1099500000.0 1625000.0 1697500.0 1229300.0 1156300.0 1766200.0 1744600.0 1322400.0 1362300.0 1653300.0 1323300.0 False True 1534858.0106428096 1615949.552000556 1308542.644949544 1266194.404345728 1905189.891696657 1733711.304273487 1456081.0973802852 1357574.4992632098 1353102.3963013687 1311576.591511822 1.1702389479775759 1.2320664782053563 0.9976867942124669 0.9653987518077132 1.4525952232043053 1.3218528871997333 1.110176185518755 1.035070698919967 1.0316609834746142 1.0 20.322870627760363 -7.061349808289705 4.390290963903623 1.0288817941156467 1.187027426840702 0.2397064011831509 0.13322825077234657 0.3885663675012545 14.944450031151831 0.07160269934088628 0.04113630274495698 8.682607953076508e-08 7.061349808289705 0.15814563272505522 KDAS(ph)DDLDDLNFFNQK ddPTM_KYSE-520_SHP099_60min_R1 4 KDASDDLDDLNFFNQK 16 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 KDAS(1)DDLDDLNFFNQK;KDAS(1)DDLDDLNFFNQK;KDAS(1)DDLDDLNFFNQK;KDAS(1)DDLDDLNFFNQK 273.27 7.3731e-30 1480330000.0 1280020.0 1090360.0 997851.0 1142980.0 1218120.0 1158680.0 1236480.0 1289980.0 1288310.0 1329580.0 True False 1209014.7389433922 1037977.468936273 1062174.0720780492 1251608.475550532 1313979.1138452804 1151448.2483294762 1361475.4652818937 1285505.3604635962 1054385.3796522217 1317800.9555975876 0.917448673722608 0.7876587617631359 0.8060201106747427 0.9497705023160808 0.9970998338284144 0.8737649213551565 1.03314196237208 0.9754928124791454 0.8001097397702872 1.0 20.329701047365173 -5.269203649818981 24.338988370779965 0.9486516253183097 0.832104139001491 0.3341797316733699 0.07103264920476964 431.3625332645588 1352211.0204324261 0.019585762368126917 0.029689437406628088 5.380174356614808e-06 5.269203649818981 -0.11654748631681866 KDAS(ph)SSPASTASSASSTSLK ddPTM_KYSE-520_SHP099_60min_R1 2 KDASSSPASTASSASSTSLK 20 1 Q04724;A0A669KBK8 Q04724 TLE1 Transducin-like enhancer protein 1 1 KDAS(0.502)S(0.304)S(0.186)PAS(0.007)T(0.001)ASSASSTSLK;KDAS(0.426)S(0.426)S(0.147)PASTASSASSTSLK 161.22 5.9675e-09 1372480000.0 1267110.0 1199060.0 875490.0 875660.0 855720.0 1041440.0 764140.0 1232690.0 1323810.0 1004770.0 True False 1196820.8823788376 1141455.3577742476 931925.4862335272 958882.4631232214 923060.2956192186 1034939.9866574473 841386.728487728 1228414.0861020095 1083439.4745343956 995868.5194992307 1.2017860379607692 1.146190822808843 0.9357916913591595 0.9628605025143203 0.9268897224338174 1.039233559845695 0.8448773226718892 1.233510309894838 1.0879342536896335 1.0 19.92559575610001 -10.593131386372301 12.927604726607452 0.9999998016855314 1.036075782384278 0.00865891582138878 0.1204826539348872 7.183186092617264e-07 2.2579292104646084e-08 0.12166901948443366 0.029508909432747133 2.5519291550740565e-11 10.593131386372301 0.036075980698746735 KDDDS(ph)DDESQSSHTGK ddPTM_KYSE-520_SHP099_60min_R1 11 KDDDSDDESQSSHTGK 16 1 O94874-3;O94874-2;O94874 O94874-3 UFL1 E3 UFM1-protein ligase 1 1 KDDDS(1)DDESQSSHTGK;KDDDS(0.982)DDES(0.014)QS(0.002)S(0.002)HTGK;KDDDS(1)DDESQSSHTGK;KDDDS(0.998)DDES(0.002)QSSHTGK;KDDDS(0.992)DDES(0.008)QSSHTGK;KDDDS(0.999)DDES(0.001)QSSHTGK;KDDDS(0.61)DDES(0.389)QSSHTGK;KDDDS(0.999)DDES(0.001)QSSHTGK;KDDDS(1)DDESQSSHTGK;KDDDS(0.999)DDES(0.001)QSSHTGK;KDDDS(0.997)DDES(0.003)QSSHTGK 308.39 3.5663000000000003e-47 14601090000.0 5232840.0 6811980.0 6264495.0 17080320.0 6613620.0 5916660.0 6089750.0 5733979.0 7806950.0 5647130.0 True False 4942563.933792074 6484722.25580957 6668314.371246387 18703628.47741452 7134074.26764967 5879731.930266415 6705361.360232605 5714089.165169759 6389404.677194078 5597100.821600652 0.8830578707314773 1.1585859291266218 1.1913872170234359 3.3416636708119323 1.2746017081052823 1.0504959831302334 1.1980061774758264 1.0209015966118777 1.1415561164336583 1.0 22.4162483048214 -5.98601018108648 24.99913836091464 1.0987154331831375 1.66814485133478 0.151020027478725 0.6271996304776188 486.30715186244623 869002.7377195639 0.20646625469260563 0.23400836926169827 1.032737195207549e-06 5.98601018108648 0.5694294181516426 KDDDS(ph)DDESQSSHTGKK ddPTM_KYSE-520_SHP099_60min_R1 1 KDDDSDDESQSSHTGKK 17 2 O94874-3;O94874-2;O94874 O94874-3 UFL1 E3 UFM1-protein ligase 1 1 KDDDS(0.999)DDES(0.001)QSSHTGKK 130.71 2.3049000000000002e-05 413460000.0 69109.0 88434.0 88938.0 235260.0 101900.0 92462.0 75526.0 69470.0 104110.0 68483.0 True False 65275.38600462404 84185.49789785972 94671.08578583147 257619.0396665016 109918.9502683101 91884.9103609626 83160.90514272789 69229.02478441987 85206.24839952555 67876.29389896775 0.9616816454620356 1.2402783514251359 1.3947592060159786 3.795419945142577 1.6194011775587196 1.353711363465588 1.2251833499706233 1.0199293568895442 1.255316746172869 1.0 16.05062017425403 -6.2811963287360975 3.629253208727228 1.158026206366795 1.8658068822637668 0.16279679959593507 0.725498727874547 0.4761922933570579 13.672927841748258 0.28374404840663775 0.2604290729399939 5.233637893702252e-07 6.2811963287360975 0.7077806758969718 KDDEDEEEEEEVS(ph)DS ddPTM_KYSE-520_SHP099_60min_R1 3 KDDEDEEEEEEVSDS 15 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 KDDEDEEEEEEVS(0.5)DS(0.5);KDDEDEEEEEEVS(0.5)DS(0.5);KDDEDEEEEEEVS(0.983)DS(0.017) 227.47 1.1362000000000001e-14 2039200000.0 3354730.0 3074390.0 2452130.0 2841360.0 2908830.0 3032960.0 3026970.0 3141120.0 3353480.0 3079910.0 True False 3168636.4394115456 2926691.689646531 2610198.2233467186 3111402.000113969 3137738.372021285 3014030.1716206097 3332965.6679803366 3130224.1878629224 2744572.566351371 3052624.393533722 1.0380040355189353 0.9587460861041567 0.8550669479271079 1.019254778512795 1.027882230996993 0.9873570354758138 1.0918361509003376 1.0254206821165348 0.8990862328706776 1.0 21.541618655127404 KDDEDEEEEEEVSDS(ph) ddPTM_KYSE-520_SHP099_60min_R1 1 KDDEDEEEEEEVSDS 15 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 KDDEDEEEEEEVS(0.184)DS(0.816) 227.47 1.1362000000000001e-14 870310000.0 1598000.0 1422500.0 1135300.0 1355400.0 1372600.0 1405100.0 1485300.0 1504900.0 1563200.0 1524900.0 True False 1509355.7544659765 1354160.96478397 1208483.254544226 1484216.808484129 1480615.810974315 1396330.2497046199 1635448.6191310775 1499679.8531463007 1279362.2850652048 1511390.5723542497 0.9986536783241253 0.8959702340041942 0.7995836924282295 0.9820206871955057 0.9796381147647377 0.9238712184962199 1.0820820567800593 0.9922516923010128 0.8464802602760575 1.0 20.52744509811659 KDDEDSFRR ddPTM_KYSE-520_SHP099_60min_R1 4 KDDEDSFRR 9 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 0 ;;; 139.86 0.00028027 3311960000.0 5099380.0 5518450.0 4022630.0 3477190.0 5164600.0 5521380.0 4100630.0 4848530.0 5054870.0 3920900.0 False True 4816507.226037993 5253335.378637682 4281935.166235566 3807661.0921447086 5571024.637445677 5486919.019368081 4515161.6986921625 4831711.581085404 4137033.030902989 3886163.876414044 1.2393988980419486 1.3518049021353147 1.1018411220956332 0.9797994148559238 1.4335537086475978 1.4119113845582687 1.1618557122862576 1.2433113308499653 1.064554445583606 1.0 21.88991530882306 -7.854699702474214 3.121624567287043 1.0002548707534646 1.2416730534394567 0.29114508285682905 0.1314703522140368 0.32503799251949295 5.955416876655151 0.13364893033611902 0.036298970279234 1.3973342286607609e-08 7.854699702474214 0.24141818268599202 KDDEENYLDLFSHK ddPTM_KYSE-520_SHP099_60min_R1 9 KDDEENYLDLFSHK 14 1 Q07666;Q07666-3;Q07666-2 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 0 ;;;;;;;; 251.87 1.2067e-18 32856320000.0 31073980.0 27605000.0 17997260.0 16700750.0 29348550.0 27293280.0 21666370.0 23056270.0 22951810.0 22369920.0 False True 29350244.384956643 26278814.36405025 19157392.17623415 18287984.25873644 31658113.914592862 27122932.51559182 23856618.122994002 22976293.18074389 18784339.87204606 22171739.912334416 1.3237682067805936 1.1852391588551432 0.8640455035094766 0.8248330681780461 1.4278587986223426 1.2233109635434156 1.0759921511492323 1.0362873311517555 0.8472199270926906 1.0 24.402218653379418 -7.4315217453442175 2.6816585796705716 0.9266469251323669 1.1280228701243284 0.17719694224534155 0.17828190693946722 0.5717691233824057 7.746494056633172 0.1418472691268431 0.05319786283746015 3.702356670490465e-08 7.4315217453442175 0.20137594499196154 KDDEVQVVR ddPTM_KYSE-520_SHP099_60min_R1 2 KDDEVQVVR 9 1 P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3 P61254 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 0 ; 141.91 0.00096234 1185600000.0 2250300.0 2035100.0 1334530.0 1312500.0 1914680.0 2002290.0 1494390.0 1816090.0 1941190.0 1640810.0 False True 2125471.3731381656 1937330.741252621 1420555.939123496 1437239.6053824853 2065354.4229610236 1989792.9653982345 1645457.5250409283 1809790.4076685908 1588718.8294176832 1626273.6999308628 1.3069579697615015 1.1912697975346844 0.8735036047031244 0.8837624352183684 1.2699918980727705 1.223528957937908 1.0117961848063344 1.112844909036855 0.9769074107791473 1.0 20.63313865103194 KDDPLTNLNTAFDVAEK ddPTM_KYSE-520_SHP099_60min_R1 2 KDDPLTNLNTAFDVAEK 17 1 P12814-3;P12814;P12814-2;P12814-4;H9KV75;G3V2N5;G3V2W4 P12814-3 ACTN1 Alpha-actinin-1 0 ; 181.64 7.8786e-09 1371590000.0 2515760.0 2538790.0 1779620.0 1702710.0 2457930.0 2518870.0 1817630.0 2135910.0 2257740.0 2211610.0 False True 2376205.777756776 2416822.717598518 1894337.1526926775 1864535.0464615717 2651355.107291342 2503148.798002616 2001373.7787593207 2128501.0267351423 1847791.3289938034 2192016.8560065413 1.0840271466186595 1.1025566299711456 0.8641982599275343 0.8506025130930871 1.2095505105383324 1.1419386630825918 0.9130284620189747 0.9710240233338747 0.8429640145925453 1.0 21.06382746159321 -6.80451123957101 24.997524910212306 0.9293393053728528 1.035706090968092 0.18642767901399548 0.11244854924496116 285.79418856546056 165863.27290470246 0.05135247653561442 0.03462205904915112 1.5685153038712523e-07 6.80451123957101 0.10636678559523915 KDDPVTNLNNAFEVAEK ddPTM_KYSE-520_SHP099_60min_R1 5 KDDPVTNLNNAFEVAEK 17 1 O43707;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ;;;; 226.44 4.279900000000001e-18 1674437000.0 2327200.0 2338980.0 1738070.0 1542870.0 2299060.0 2282410.0 1762630.0 2197210.0 2177030.0 1878860.0 False True 2198105.5768418172 2226611.8899194417 1850108.773210324 1689503.9009192192 2479982.9421379925 2268164.6325729974 1940813.8420110468 2189588.3913426674 1781736.2304602733 1862214.7621309618 1.1803716851253452 1.1956794324686237 0.9934991445848144 0.9072551325851875 1.3317384184518593 1.2179930471486011 1.042207312216848 1.1757979991722796 0.9567834315851972 1.0 20.828588032336082 -7.767755189149738 24.99708771129729 0.978391632854496 1.1273999689760563 0.21579486055236896 0.11591229025918498 273.69311162697386 1083187.7350588597 0.10808759179708256 0.030608788394891364 1.7070443750262562e-08 7.767755189149738 0.14900833612156028 KDDRVEER ddPTM_KYSE-520_SHP099_60min_R1 2 KDDRVEER 8 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 121.73 0.00061387 1104280000.0 545390.0 611800.0 219040.0 270830.0 661850.0 727040.0 337610.0 365380.0 429840.0 665700.0 False True 515136.1294919893 582408.2096694777 233159.6688763912 296569.6017719915 713933.8295886272 722502.2736782047 371738.91355607787 364112.58206033305 351791.8913846134 659802.4159067624 0.7807430180200855 0.8827009353536205 0.35337801628986354 0.4494824429589543 1.0820418543140258 1.0950282330889534 0.5634094459099538 0.5518509379204612 0.5331776345516226 1.0 19.331674534865154 KDDRVEERDPPR ddPTM_KYSE-520_SHP099_60min_R1 3 KDDRVEERDPPR 12 3 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;; 128.31 4.016e-05 6073800000.0 1948450.0 2308390.0 1812050.0 1034674.0 1742830.0 2069520.0 1203152.0 1518242.0 2297040.0 1262440.0 False True 1840365.5943612223 2197491.479435972 1928857.6423825095 1133009.1058739175 1879980.8056537674 2056603.3580305362 1324778.3457919569 1512975.572862345 1879955.4396661802 1251255.7637634573 1.4708148786670707 1.7562288567019102 1.541537468391753 0.9054976118280693 1.5024752413521485 1.6436314761458515 1.0587590356486052 1.2091657170966401 1.5024549689279791 1.0 20.254945284006865 -1.0000000001451437 0.07371775614855683 0.7053379374217442 2.980404229719516 0.24181236498841996 0.24208022455975423 348.22826454822246 1.8910365631583346 9.65297532232844 81.54844286517041 0.09999999996657943 1.0000000001451437 2.2750662922977716 KDDS(ph)DDDGGGWITPSNIK ddPTM_KYSE-520_SHP099_60min_R1 13 KDDSDDDGGGWITPSNIK 18 1 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK;KDDS(1)DDDGGGWITPSNIK 264.07 4.8538999999999995e-30 146005530000.0 29917160.0 26453740.0 26172100.0 25943200.0 27158680.0 26687540.0 26643390.0 27483230.0 31700560.0 27843840.0 True False 28257595.49642008 25182862.622526743 27859195.442840606 28408833.92789253 29295913.604248792 26520973.163619686 29336763.875628334 27387897.089764085 25944537.41008607 27597165.239779696 1.023931090418244 0.9125162821515858 1.0094948231379652 1.0294113065983626 1.0615551760374449 0.961003528195398 1.0630354103667543 0.9924170418158035 0.9401160294785835 1.0 24.71801674626752 -4.923616691122959 24.99999999999312 1.0099850155710528 0.9664184326053852 0.10632955036054659 0.04444496754174342 68.29205937647626 22348.483185279747 0.011331127577812546 0.023587622645258533 1.1922938638961643e-05 4.923616691122959 -0.04356658296566762 KDDS(ph)HS(ph)AEDS(ph)EDEKEDHK ddPTM_KYSE-520_SHP099_60min_R1 9 KDDSHSAEDSEDEKEDHK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 KDDS(1)HS(1)AEDS(1)EDEKEDHK;KDDS(1)HS(1)AEDS(1)EDEKEDHK;KDDS(1)HS(1)AEDS(1)EDEKEDHK;KDDS(1)HS(1)AEDS(1)EDEKEDHK;KDDS(1)HS(1)AEDS(1)EDEKEDHK;KDDS(1)HS(1)AEDS(1)EDEKEDHK;KDDS(1)HS(1)AEDS(1)EDEKEDHK;KDDS(1)HS(1)AEDS(1)EDEKEDHK;KDDS(1)HS(1)AEDS(1)EDEKEDHK 157.31 3.2210999999999996e-07 16463860000.0 15119401.0 12427381.0 11022679.0 13941232.0 12427680.0 13432620.0 14371145.0 15140093.0 14641696.0 11865808.0 True False 14280697.686751341 11830350.962880833 11733218.525249977 15266202.497695757 13405667.712173443 13348782.03600261 15823920.585459137 15087575.551107254 11983133.093519745 11760686.172578933 1.2142741909097137 1.0059235311001096 0.9976644519778957 1.2980707310505608 1.1398712214113773 1.135034286275444 1.3454929715201474 1.2828822510616136 1.0189144508812307 1.0 23.48746890031247 -5.249931389391756 24.93852663174307 1.1901699387079363 1.0659510110185653 0.11980324940829179 0.12070313976454818 1268.8984164386172 2749776.8260793267 0.03236254365871152 0.05546230167397897 5.624301718826334e-06 5.249931389391756 -0.12421892768937104 KDDS(ph)HS(ph)AEDS(ph)EDEKEDHKNVR ddPTM_KYSE-520_SHP099_60min_R1 4 KDDSHSAEDSEDEKEDHKNVR 21 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 KDDS(1)HS(1)AEDS(1)EDEKEDHKNVR;KDDS(1)HS(1)AEDS(1)EDEKEDHKNVR;KDDS(1)HS(1)AEDS(1)EDEKEDHKNVR;KDDS(1)HS(1)AEDS(1)EDEKEDHKNVR 114.61 6.385e-05 16198441000.0 3111108.0 2843646.0 2838233.0 2756461.0 2752679.0 2709438.0 2391479.0 2236704.0 3724527.0 1772282.0 True False 2938528.6373999636 2707032.977760331 3021190.040513367 3018434.2246797774 2969299.1766989394 2692527.3924270063 2633233.0359058594 2228945.395874638 3048246.7844850575 1756580.9602945324 1.6728683185244417 1.5410806782890512 1.7199264416521929 1.7183575894922973 1.690385609212721 1.5328228264386632 1.4990672763892052 1.2689112806396938 1.735329514202378 1.0 20.744338640802606 -11.754372777276787 0.1991656125025521 1.180562003330628e-09 1.721045080985592 0.6647246741978035 0.13068385987278724 29.659388103356655 0.6555736959776753 13.063966626194127 0.3462415874359897 1.7604643007018206e-12 11.754372777276787 1.7210450798050299 KDDS(ph)HSAEDS(ph)EDEKEDHK ddPTM_KYSE-520_SHP099_60min_R1 1 KDDSHSAEDSEDEKEDHK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 KDDS(0.512)HS(0.49)AEDS(0.998)EDEKEDHK 71.545 0.009986 459540000.0 1173600.0 930740.0 917850.0 1078500.0 1068100.0 1185200.0 1166100.0 1201700.0 1240100.0 914000.0 True False 1108498.0684864018 886025.8533307775 977016.0796119254 1181000.315737152 1152153.3933423164 1177802.7271723812 1283980.768039285 1197531.5831788871 1014929.1003770203 905902.671081239 1.2236392538321532 0.9780585504547221 1.0785000539250085 1.3036724070231194 1.2718291159989241 1.3001426806332477 1.4173495774185005 1.321920799449211 1.1203511511514288 1.0 19.78899653189242 -5.256012467948236 24.458701132885498 1.2715433089286419 1.081865191497444 0.23027501383726678 0.12374551034953193 386.45456163582304 1741714.6409665742 0.03279596161814798 0.05470490509244798 5.546097907076676e-06 5.256012467948236 -0.1896781174311979 KDDSHS(ph)AEDS(ph)EDEKEDHK ddPTM_KYSE-520_SHP099_60min_R1 9 KDDSHSAEDSEDEKEDHK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 KDDS(0.086)HS(0.914)AEDS(1)EDEKEDHK;KDDS(0.007)HS(0.993)AEDS(1)EDEKEDHK;KDDS(0.062)HS(0.938)AEDS(1)EDEKEDHK;KDDS(0.138)HS(0.862)AEDS(1)EDEKEDHK;KDDS(0.014)HS(0.986)AEDS(1)EDEKEDHK;KDDS(0.377)HS(0.623)AEDS(1)EDEKEDHK;KDDS(0.431)HS(0.569)AEDS(1)EDEKEDHK;KDDS(0.099)HS(0.901)AEDS(1)EDEKEDHK;KDDS(0.015)HS(0.985)AEDS(1)EDEKEDHK 223.18 3.679100000000001e-18 79664960000.0 10410420.0 8389100.0 7798260.0 8987930.0 9061550.0 9172140.0 9617180.0 9874230.0 10492110.0 7180176.0 True False 9832933.249942228 7986075.043704176 8300948.317257163 9842140.164880304 9774642.431833228 9114893.272027418 10589378.409031851 9839978.600792596 8587007.308569271 7116565.226732397 1.3816964977720105 1.1221811069342251 1.1664262256848 1.3829902279135529 1.3735056337453537 1.2807995123530347 1.4879900726904476 1.3826864909254357 1.2066224414431501 1.0 22.762749669223762 -3.135694607875993 12.417063856855217 1.293092324007966 42.18174593111411 0.0 0.14394342255150439 0.0 7.245885005724032e-18 0.0326325650117482 0.0 0.0007316533949727222 3.135694607875993 40.88865360710614 KDDSHS(ph)AEDS(ph)EDEKEDHKNVR ddPTM_KYSE-520_SHP099_60min_R1 17 KDDSHSAEDSEDEKEDHKNVR 21 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 KDDS(0.445)HS(0.555)AEDS(1)EDEKEDHKNVR;KDDS(0.17)HS(0.831)AEDS(0.999)EDEKEDHKNVR;KDDS(0.152)HS(0.848)AEDS(1)EDEKEDHKNVR;KDDS(0.015)HS(0.985)AEDS(1)EDEKEDHKNVR;KDDSHS(1)AEDS(1)EDEKEDHKNVR;KDDS(0.036)HS(0.964)AEDS(1)EDEKEDHKNVR;KDDS(0.164)HS(0.836)AEDS(1)EDEKEDHKNVR;KDDS(0.048)HS(0.952)AEDS(1)EDEKEDHKNVR;KDDS(0.122)HS(0.878)AEDS(1)EDEKEDHKNVR;KDDSHS(1)AEDS(1)EDEKEDHKNVR;KDDS(0.106)HS(0.894)AEDS(1)EDEKEDHKNVR;KDDS(0.2)HS(0.8)AEDS(1)EDEKEDHKNVR;KDDS(0.038)HS(0.962)AEDS(1)EDEKEDHKNVR;KDDS(0.403)HS(0.597)AEDS(1)EDEKEDHKNVR;KDDS(0.003)HS(0.997)AEDS(1)EDEKEDHKNVR;KDDS(0.008)HS(0.992)AEDS(1)EDEKEDHKNVR;KDDSHS(1)AEDS(1)EDEKEDHKNVR 243.48 6.0934e-27 227380340000.0 14654863.0 12810575.0 13927700.0 13392658.0 12824256.0 12707319.0 11138083.0 10939033.0 16760076.0 7331358.0 True False 13841928.53564487 12195135.74793491 14825501.827107912 14665492.189670537 13833451.98716465 12628007.90858036 12264029.126854727 10901088.047712509 13716868.685533827 7266407.871830206 1.9049203925513298 1.6782894606304688 2.0402793358988505 2.018258876786214 1.9037538535089673 1.737861145606146 1.6877705385075994 1.500203159524381 1.8877097084943746 1.0 22.792810917482154 -10.955996662869364 0.23711940735609355 0.07903378945227198 1.9527182463695258 0.7502606119103103 0.14611743528128418 15.454624918500382 0.5566707227022061 8.13881274714023 0.27428601353757875 1.1066322873376551e-11 10.955996662869364 1.873684456917254 KDDSHSAEDS(ph)EDEKEDHK ddPTM_KYSE-520_SHP099_60min_R1 9 KDDSHSAEDSEDEKEDHK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK;KDDSHSAEDS(1)EDEKEDHK 314.76 7.3218e-48 46840215000.0 20354198.0 16313835.0 14654487.0 18444266.0 17697312.0 17073943.0 19273611.0 16543038.0 19351586.0 11459694.6 True False 19225110.06185225 15530093.879034443 15599138.680028211 20197203.495169222 19089989.770468798 16967378.188479427 21221975.692196555 16485654.062352108 15837825.796184633 11358170.621351486 1.6926238126509754 1.3673059154297638 1.3733847817626903 1.7782092000979288 1.6807275050599053 1.4938477994496364 1.868432549543035 1.4514356767419745 1.394399355686041 1.0 23.43722715327649 -8.095385884752083 1.7710085525210697 1.0036807676138388 1.5937729107895335 0.56851999206129 0.1580712752575782 0.36135013432787716 2.4372569622412152 0.15593749552898248 0.044337680665179215 8.028124802233076e-09 8.095385884752083 0.5900921431756947 KDDSHSAEDS(ph)EDEKEDHKNVR ddPTM_KYSE-520_SHP099_60min_R1 8 KDDSHSAEDSEDEKEDHKNVR 21 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KDDSHSAEDS(1)EDEKEDHKNVR;KDDSHSAEDS(1)EDEKEDHKNVR;KDDSHSAEDS(1)EDEKEDHKNVR;KDDSHSAEDS(1)EDEKEDHKNVR;KDDSHSAEDS(1)EDEKEDHKNVR;KDDS(0.046)HS(0.121)AEDS(0.834)EDEKEDHKNVR;KDDSHSAEDS(1)EDEKEDHKNVR;KDDSHSAEDS(1)EDEKEDHKNVR 246.77 5.1101e-27 38628550000.0 18438800.0 16856650.0 17964230.0 16670420.0 16229290.0 15650690.0 14061200.0 13543210.0 22224960.0 7663100.0 True False 17415963.007163472 16046831.2316525 19122233.00958425 18254771.704655487 17506442.79097137 15553008.23838132 15482643.320087463 13496231.765518991 18189467.509648632 7595210.895801591 2.2930190150204393 2.112756505618918 2.5176697884919115 2.403458173195189 2.304931756489924 2.04773882539306 2.038474445607009 1.7769396993280742 2.394860097920814 1.0 22.85665859384125 -10.589885957839032 0.27313467560368 9.74849412493877e-19 2.358521024996516 0.7697590640344877 0.20087611688030066 11.026009398658937 0.5505637229950474 7.879352842708579 0.2705659965761504 2.57107083620016e-11 10.589885957839032 2.358521024996516 KDDSKDDDET(ph)EEDNNQDEYDPMEAEEAEDEEDDRDEEEMTK ddPTM_KYSE-520_SHP099_60min_R1 1 KDDSKDDDETEEDNNQDEYDPMEAEEAEDEEDDRDEEEMTK 41 3 A0A0C4DGG8;Q8IX12-2;Q8IX12;H0YFJ7 A0A0C4DGG8 CCAR1 Cell division cycle and apoptosis regulator protein 1 1 KDDS(0.005)KDDDET(0.995)EEDNNQDEYDPMEAEEAEDEEDDRDEEEMTK 283.98 5.501e-54 957090000.0 231750.0 236230.0 195080.0 226560.0 227540.0 193560.0 239060.0 260430.0 258670.0 199930.0 True False 218894.36551782858 224881.1562115408 207655.16893903623 248092.19428225196 245446.1034744978 192351.92024256373 263226.5178007646 259526.62911481902 211702.0485400563 198158.7757431862 1.1046412892735857 1.1348533789035253 1.0479231523319328 1.2519869147949292 1.2386335278564495 0.9706959458199915 1.3283616474392543 1.309690313444233 1.0683455615128656 1.0 17.59629733495907 -5.253204203864104 24.930072948659657 1.1812717991490331 1.0997106884848742 0.06078367764080228 0.11845378795796724 1601.0364910461174 4846754.207559282 0.03210407423727504 0.054382023195495094 5.582076655782346e-06 5.253204203864104 -0.08156111066415894 KDDSYFDR ddPTM_KYSE-520_SHP099_60min_R1 2 KDDSYFDR 8 1 Q9HCD5;Q5JY17 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 0 ; 84.738 0.013543000000000001 688650000.0 1758800.0 1582160.0 1196020.0 1023230.0 1518520.0 1620360.0 1302440.0 1512460.0 1396880.0 1412160.0 False True 1661235.857919122 1506150.658729422 1273117.3628996613 1120477.4715546833 1638018.8848030847 1610246.732197975 1434103.345789457 1507213.6292708172 1143241.8044791985 1399649.3610438553 1.1868943066427553 1.0760914130708694 0.9095973594059109 0.8005415518634137 1.1703065999197497 1.150464378447654 1.0246161543773407 1.0768508679536286 0.8168058631674517 1.0 20.416634019035612 -6.762166153420076 0.01043013227318777 5.582230498629273e-05 2.035296728855049 0.04530538666325057 0.12958446975765606 7244.418035419427 45.71755946988563 4385.912323412329 4528.346886965424 1.729154688521063e-07 6.762166153420076 2.0352409065500625 KDEDLFR ddPTM_KYSE-520_SHP099_60min_R1 3 KDEDLFR 7 1 O75531 O75531 BANF1 Barrier-to-autointegration factor;Barrier-to-autointegration factor, N-terminally processed 0 ;; 134.91 0.0044943000000000006 3536210000.0 5561940.0 5921800.0 3729830.0 3300500.0 5844880.0 6490190.0 4741840.0 5260660.0 5119370.0 5352610.0 False True 5253408.1007474875 5637307.839196989 3970260.8097389988 3614178.527668493 6304838.803181949 6449682.316796258 5221191.463098703 5242411.998307277 4189821.4568156637 5305190.039667563 0.9902393809584774 1.0626024321553311 0.7483729668594089 0.6812533576827282 1.1884284551618112 1.215730684211345 0.9841667167545758 0.9881666743526837 0.789758976679035 1.0 22.338973000836567 KDEEDEHGDKKPK ddPTM_KYSE-520_SHP099_60min_R1 6 KDEEDEHGDKKPK 13 3 Q9BUQ8;F8W1J5;F8VVA2 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 0 ;;;;; 157.75 8.644200000000001e-07 6049140000.0 9167220.0 9375900.0 4132010.0 3741890.0 9670400.0 11150390.0 6191050.0 7779210.0 7523930.0 5871810.0 False True 8658696.032199988 8925467.690487191 4398365.97604975 4097518.100559752 10431405.462950619 11080796.27998283 6816901.752825332 7752225.736191268 6157773.974840473 5819790.331599053 1.4878020579516158 1.5336407640023724 0.755760212213908 0.7040662750875962 1.7924022805963309 1.9039854786208863 1.1713311587553896 1.3320455367781705 1.0580748831115632 1.0 22.472535747713568 -7.812249948529989 3.6067263103118323 0.9997569799716542 1.3319372265678473 0.1000585225639784 0.368359922008406 0.6228753754030059 15.312511405819622 0.37976904300398845 0.10406680245912517 1.540813416824005e-08 7.812249948529989 0.33218024659619305 KDEEGQKEEDKPR ddPTM_KYSE-520_SHP099_60min_R1 4 KDEEGQKEEDKPR 13 3 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 0 ;;; 179.56 1.0394e-07 9601300000.0 5535320.0 5898930.0 4313450.0 3822060.0 5579550.0 5654720.0 4287810.0 6285900.0 5772060.0 4126280.0 False True 5228264.765213153 5615536.54832556 4591501.888764018 4185307.4332557577 6018628.841703144 5619426.794968113 4721263.679792919 6264095.68004009 4723999.40579162 4089724.3693972663 1.278390496028387 1.3730843551085483 1.12269225846159 1.023371517301685 1.4716465703017916 1.374035579761159 1.1544209959774692 1.5316669570480803 1.1550899227196163 1.0 21.96357218405516 -8.002771761484851 24.997004314185002 0.9999999538547166 1.2873104543130944 0.27572367709492107 0.14935541510007033 114.47519588841779 1032399.6092273545 0.14608016495234447 0.0377177364320911 9.936381064100664e-09 8.002771761484851 0.2873105004583778 KDEEKEDPK ddPTM_KYSE-520_SHP099_60min_R1 3 KDEEKEDPK 9 2 P55209;P55209-2;H0YIV4;F5H4R6;F8VY35;F8W118;F8VV59;H0YH88;F8W0J6;F8W543;F8W020;H0YHC3;B7Z9C2;F8VXI6;F8VUX1;P55209-3 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 0 ;; 64.439 0.020063 2855890000.0 2509220.0 5790500.0 1538920.0 1206310.0 5147500.0 11706700.0 4557000.0 2656290.0 2333550.0 31618500.0 False True 2370028.5645939424 5512315.688282305 1638121.2455590593 1320957.3397096742 5552578.964731375 11633634.142920114 5017666.032034148 2647075.949972747 1909836.144008382 31338384.688820776 0.07562701741418708 0.1758966118712779 0.052272038326960105 0.04215141759303549 0.17718140293019397 0.37122634936159093 0.1601124653315039 0.08446753003568268 0.06094239262720107 1.0 24.90142748341303 -10.193312875703116 4.403052339533182 1.0002412810811347 0.1371452791621335 0.8859371200374082 0.09328430657546723 151873624.15351966 300628739.571327 501068.4750052128 0.025467165577592384 6.407478008601656e-11 10.193312875703116 -0.8630960019190013 KDEEVLK ddPTM_KYSE-520_SHP099_60min_R1 6 KDEEVLK 7 1 Q13838-2;Q13838;Q5STU3;A0A0G2JJZ9;F6WLT2;F6TRA5;A0A140T9X9;F6S4E6;A0A0A0MT12;F6UJC5;A0A140T996;A0A140TA18;A0A140T9X3;A0A140T9L4;A0A140T973;A0A140T9K1;F6R6M7;A0A0G2JJL7;F6QYI9;A0A140T9N3;A0A140T9K2;O00148;K7EQN7;O00148-3;O00148-2;A0A0D9SEM9 Q13838-2;O00148 DDX39B;DDX39A Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A 0 ;;;;; 99.802 0.012842 4644100000.0 5490400.0 5206930.0 3203420.0 3049980.0 4876630.0 5223950.0 3700070.0 4629110.0 4312030.0 4548140.0 False True 5185836.567158952 4956781.26703873 3409917.5788532267 3339849.1821900737 5260393.036770847 5191345.390324139 4074109.184803293 4613052.697852396 3529074.0494304677 4507847.017999376 1.1504020758584825 1.0995895040907122 0.7564403949907287 0.7408967449104626 1.1669413393503885 1.1516241277921861 0.9037815987401054 1.0233383429901113 0.7828735170779383 1.0 22.10400712518066 KDEEVLKK ddPTM_KYSE-520_SHP099_60min_R1 1 KDEEVLKK 8 2 Q13838-2;Q13838;Q5STU3;A0A0G2JJZ9;F6WLT2;F6TRA5;A0A140T9X9;F6S4E6;A0A0A0MT12;F6UJC5;A0A140T996;A0A140TA18;A0A140T9X3;A0A140T9L4;A0A140T973;A0A140T9K1;F6R6M7;A0A0G2JJL7;F6QYI9;A0A140T9N3;A0A140T9K2;O00148;K7EQN7;O00148-3;O00148-2;A0A0D9SEM9 Q13838-2;O00148 DDX39B;DDX39A Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A 0 49.368 0.055163 0.0 758350.0 668980.0 598220.0 510460.0 556700.0 508670.0 491240.0 689430.0 758210.0 643480.0 False True 716282.8137667552 636841.1966405475 636782.2183858422 558973.9649246046 600509.1228102869 505495.20184844383 540899.3332403888 687038.5282441714 620538.176918684 637779.2678198641 1.123088895967474 0.9985291601238102 0.9984366857244668 0.8764379670655625 0.9415626269305075 0.7925864438591583 0.8480980184403888 1.0772355937387106 0.9729669938000405 1.0 19.28269767535153 -4.304891602411746 1.3014578919247457 0.9263780740517062 1.1931793182742643 0.35291597305781264 0.07751672979667644 1.508726544623422 2.3796986731553478 0.02488674849464392 0.5256756700258296 4.9557386796601516e-05 4.304891602411746 0.266801244222558 KDEKKEES(ph)EES(ph)DDDMGFGLFD ddPTM_KYSE-520_SHP099_60min_R1 3 KDEKKEESEESDDDMGFGLFD 21 3 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 2 KDEKKEES(1)EES(1)DDDMGFGLFD;KDEKKEES(1)EES(1)DDDMGFGLFD;KDEKKEES(1)EES(1)DDDMGFGLFD 84.948 0.004287600000000001 1285160000.0 1338870.0 2307000.0 2642710.0 927750.0 824380.0 793980.0 555159.0 562547.0 2790690.0 942240.0 True False 1264600.2121288255 2196168.2571223998 2813063.3150854995 1015923.0810617917 889254.0159194268 789024.4763080729 611279.8895497133 560595.6557564563 2283971.043569993 933892.4866516282 1.3541175565753982 2.3516285745016825 3.0121918264611356 1.0878372998847818 0.9522017026903731 0.8448772075863208 0.6545506022233802 0.6002785799963036 2.4456466629889353 1.0 19.832896945246954 -5.34342880114431 8.963630775759757 1.031084533356111 2.249111867563976 0.42519835733290157 0.6137052857682042 0.3443346054605789 35.31586011658776 0.17328442146781722 0.25729024813478696 4.53493638077808e-06 5.34342880114431 1.218027334207865 KDELS(ph)DWS(ph)LAGEDDRDSR ddPTM_KYSE-520_SHP099_60min_R1 6 KDELSDWSLAGEDDRDSR 18 2 B4DXZ6;P51114-3;P51114;H7C4S4;E7EU85;E9PFF5;P51114-2 B4DXZ6;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 2 KDELS(1)DWS(1)LAGEDDRDSR;KDELS(1)DWS(1)LAGEDDRDSR;KDELS(1)DWS(1)LAGEDDRDSR;KDELS(1)DWS(1)LAGEDDRDSR;KDELS(1)DWS(1)LAGEDDRDSR;KDELS(1)DWS(1)LAGEDDRDSR 126.59 3.0767e-05 3617540000.0 3984520.0 3167810.0 3265300.0 3827510.0 3167280.0 3329980.0 3402970.0 3755480.0 4026590.0 3721330.0 True False 3763490.7326563043 3015623.6526202504 3475786.4626647215 4191275.3996171523 3416526.9166419366 3309196.359626635 3746975.4173867083 3742453.116415618 3295462.758073631 3688361.9113509296 1.0203691565825375 0.8176051388394593 0.9423658920150956 1.1363514482454953 0.9262992620457279 0.8971994720590154 1.0158914736255669 1.0146653735085547 0.8934759758612213 1.0 21.81454879290437 -5.003987161583566 24.931834788130136 0.9840162273904172 0.9092367385793856 0.09574533589459455 0.08076484422328106 334.457269861364 2091425.479233996 0.02105634352853801 0.042328105873771275 9.908612358501225e-06 5.003987161583566 -0.07477948881103158 KDELS(ph)DWSLAGEDDR ddPTM_KYSE-520_SHP099_60min_R1 2 KDELSDWSLAGEDDR 15 1 B4DXZ6;P51114-3;P51114;H7C4S4;E7EU85;E9PFF5;P51114-2 B4DXZ6;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 KDELS(0.939)DWS(0.061)LAGEDDR;KDELS(0.976)DWS(0.024)LAGEDDR 112.3 0.00019918 235763000.0 223810.0 192583.0 159172.0 202050.0 192544.0 172332.0 205413.0 200013.0 198290.0 177536.0 True False 211394.8131458262 183331.02360702376 169432.48180420473 221252.77125145233 207696.11737449968 171256.41206469038 226178.1506776895 199319.2015863852 162285.53448412166 175963.16916091772 1.2013582964768403 1.0418715716546805 0.9628860551452065 1.2573811457619146 1.1803385808797424 0.9732514643906929 1.2853721136998297 1.1327325061081872 0.9222699003318818 1.0 17.424913964495865 -7.754420255816023 24.986934686401963 0.9611349337946493 1.1268892220968871 0.28898581569910553 0.10551406876301186 188.39414294851747 670669.607167465 0.07528981600110554 0.027100049696117276 1.760271851319739e-08 7.754420255816023 0.16575428830223782 KDELS(ph)DWSLAGEDDRDSR ddPTM_KYSE-520_SHP099_60min_R1 8 KDELSDWSLAGEDDRDSR 18 2 B4DXZ6;P51114-3;P51114;H7C4S4;E7EU85;E9PFF5;P51114-2 B4DXZ6;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 KDELS(0.968)DWS(0.032)LAGEDDRDSR;KDELS(0.5)DWS(0.5)LAGEDDRDSR;KDELS(1)DWSLAGEDDRDSR;KDELS(0.989)DWS(0.011)LAGEDDRDSR;KDELS(1)DWSLAGEDDRDSR;KDELS(0.999)DWS(0.001)LAGEDDRDSR;KDELS(1)DWSLAGEDDRDSR;KDELS(0.999)DWS(0.001)LAGEDDRDSR 219.34 1.4890000000000001e-18 8118720000.0 9365690.0 8268770.0 7653910.0 8195720.0 8838370.0 8088080.0 8597390.0 9187570.0 10237120.0 8393280.0 True False 8846156.505659852 7871525.877523201 8147293.285289 8974638.764666924 9533899.435553735 8037599.292599055 9466498.083640562 9155700.464064956 8378317.064794449 8318922.069073033 1.0633777347845221 0.9462194515304932 0.9793688674615559 1.0788223149765552 1.1460498555452974 0.9661827849644317 1.1379476818076988 1.100587358319269 1.0071397466196044 1.0 22.987965171446344 -5.26248003381064 24.935455453113818 1.0692065391704844 0.991311758878402 0.18611786691040288 0.06191335831777117 126.83243807519301 3039096.5510825724 0.016695386472828977 0.026413496665152084 5.464116699525611e-06 5.26248003381064 -0.07789478029208241 KDELS(ph)DYAEK ddPTM_KYSE-520_SHP099_60min_R1 1 KDELSDYAEK 10 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LP59 P46100-2 ATRX Transcriptional regulator ATRX 1 KDELS(1)DYAEK 69.403 0.01608 270090000.0 568460.0 833330.0 628490.0 567900.0 829100.0 658060.0 649670.0 779990.0 897190.0 620270.0 True False 536926.3906030839 793295.5759461691 669003.4710195555 621873.0452546393 894345.4530662991 653952.8034450373 715344.9837681858 777284.3967410347 734282.912319376 614774.890362758 0.8733707232028649 1.2903838272868824 1.0882088411659088 1.0115459414545915 1.4547527348401883 1.0637272499193353 1.1635884857725483 1.2643398566300998 1.194393141018008 1.0 19.229698715768507 -4.247187460457191 24.165915003245416 1.1762182264659429 0.8733703903839769 0.3078194354185749 0.13320669197906776 1884.2349035818934 3194872.4449441023 0.03176328604557696 0.6309532970267321 5.659949281845509e-05 4.247187460457191 -0.30284783608196597 KDELSDWS(ph)LAGEDDRDSR ddPTM_KYSE-520_SHP099_60min_R1 2 KDELSDWSLAGEDDRDSR 18 2 B4DXZ6;P51114-3;P51114;H7C4S4;E7EU85;E9PFF5;P51114-2 B4DXZ6;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 KDELS(0.321)DWS(0.549)LAGEDDRDS(0.13)R;KDELS(0.024)DWS(0.969)LAGEDDRDS(0.007)R 145.81 3.833500000000001e-06 1334040000.0 1087720.0 987490.0 980480.0 1022580.0 1005610.0 965750.0 1022650.0 1051740.0 1173420.0 999510.0 True False 1027382.0032839365 940049.4981472916 1043683.3096234669 1119765.6957501126 1084745.7858617816 959722.3960232267 1126029.4421021997 1048091.7594179618 960356.5075110105 990655.1190070142 1.037073330135048 0.9489170147220889 1.0535284072115891 1.130328480886984 1.0949782270837902 0.968775487664372 1.1366513133560328 1.057978442052083 0.9694155807458265 1.0 19.918023367674266 -4.863160818190141 8.9823660598548 1.0582565832308906 0.9932424274178554 0.12477855947370953 0.0598951179978141 0.45205819838483036 35.71319343844752 0.015596963293050003 0.03262125654371619 1.3703742259580366e-05 4.863160818190141 -0.06501415581303516 KDELSDWSLAGEDDRDS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 KDELSDWSLAGEDDRDSR 18 2 B4DXZ6;P51114-3;P51114;H7C4S4;E7EU85;E9PFF5;P51114-2 B4DXZ6;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 KDELS(0.021)DWS(0.012)LAGEDDRDS(0.966)R 108.99 0.00010703 822540000.0 574900.0 539160.0 487960.0 489430.0 576960.0 520880.0 501640.0 629640.0 672620.0 585660.0 True False 543009.1509652626 513257.9443043412 519414.6823636053 535945.2800475054 622363.469546656 517628.99470937415 552350.6667346077 627455.9257990813 550489.1633703671 580471.5080365846 0.9354621948663139 0.8842086772534455 0.8948151204190867 0.9232929999618984 1.0721688505466338 0.8917388494402213 0.9515551738325724 1.0809418155964607 0.9483482922915007 1.0 19.146865729773793 -5.543984390216115 24.961799303706297 0.9888162324501127 0.9038145440605603 0.3534047288834361 0.05429260637784808 257.3392388107463 304355.3295266754 0.015991268474166036 0.02064665093670123 2.8576932551852994e-06 5.543984390216115 -0.08500168838955247 KDELSDWSLAGEDDRDSR ddPTM_KYSE-520_SHP099_60min_R1 10 KDELSDWSLAGEDDRDSR 18 2 B4DXZ6;P51114-3;P51114;H7C4S4;E7EU85;E9PFF5;P51114-2 B4DXZ6;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 0 ;;;;;;;;; 218.88 1.6403e-18 18363220000.0 27368100.0 26444200.0 16645200.0 15454680.0 25659200.0 28112400.0 20465530.0 23675400.0 22003300.0 23425700.0 False True 25849936.936045222 25173780.93844658 17718176.225261662 16923488.140581008 27678433.059122883 27936940.083834674 22534385.49672499 23593275.563279886 18008055.378054775 23218166.52291879 1.1133496226124744 1.0842277711117883 0.7631169415454034 0.7288899458911078 1.1921024440840897 1.203236270024076 0.9705497406300865 1.0161558424516777 0.7756019563508133 1.0 24.46875071510881 -7.716174288956449 24.993537934466133 0.8877999215276452 1.005233720732451 0.0844088208621705 0.15922939627214897 325.25008373178844 179589.78555340815 0.11680171151916173 0.04414650213240878 1.9223201178987046e-08 7.716174288956449 0.1174337992048059 KDEPDAFK ddPTM_KYSE-520_SHP099_60min_R1 3 KDEPDAFK 8 1 P13674-2;P13674 P13674-2 P4HA1 Prolyl 4-hydroxylase subunit alpha-1 0 ;; 98.943 0.007087899999999999 1464390000.0 1555550.0 1476030.0 1023820.0 967860.0 1439130.0 1543770.0 1036860.0 1264150.0 1442310.0 1346650.0 False True 1469260.540587952 1405119.3032338028 1089817.075369918 1059845.1234022807 1552381.3434703932 1534134.7587975957 1141675.9275784355 1259764.9587048294 1180422.861676302 1334719.728677845 1.1008007966162163 1.0527448370196 0.8165137983308869 0.7940581836249238 1.1630766445687895 1.149405920834997 0.8553675375049441 0.9438423150849319 0.8843975527698332 1.0 20.348105398505215 KDEQEHEFYK ddPTM_KYSE-520_SHP099_60min_R1 8 KDEQEHEFYK 10 1 P43686;P43686-2 P43686 PSMC4 26S protease regulatory subunit 6B 0 ;;;;;;; 157.68 0.00018211 22595480000.0 41010900.0 37905500.0 25969450.0 24419260.0 37292600.0 39495200.0 30764300.0 36279800.0 33882500.0 28933400.0 False True 38735943.62379768 36084462.88268454 27643482.29958911 26740059.128481753 40227315.45413138 39248695.80679944 33874255.67463418 36153953.84156897 27730292.108317398 28677072.585844588 1.3507635239908795 1.258303572467726 0.9639576081846767 0.9324542820204399 1.4027692447934228 1.368643737581958 1.1812312980424298 1.2607267960612925 0.9669847584793388 1.0 24.77339442251069 -7.766953806419989 24.97118371950043 0.9834922274146739 1.2087970026519685 0.2740524166157273 0.1503645024722779 213.52957132948524 966883.2872469906 0.14397044130975528 0.04133486603256825 1.7101972099420132e-08 7.766953806419989 0.22530477523729464 KDEWGLVAPIS(ph)PGPLTPMR ddPTM_KYSE-520_SHP099_60min_R1 2 KDEWGLVAPISPGPLTPMR 19 1 A0A669KB77;P11137-3;P11137;E7EV03 A0A669KB77 MAP2 Microtubule-associated protein 2 1 KDEWGLVAPIS(0.999)PGPLT(0.001)PMR;KDEWGLVAPIS(1)PGPLTPMR 121.1 1.8886e-05 1847770000.0 2994000.0 2744200.0 2707800.0 2764100.0 3401600.0 3726500.0 3288800.0 3656900.0 4663400.0 3243000.0 True False 2827916.851608969 2612364.51287182 2882349.1206331817 3026799.23294303 3669286.567543516 3703241.5312250103 3621263.9995948905 3644215.0674268785 3816644.114747357 3214269.543015824 0.8798007801659485 0.8127397151704769 0.896735349061232 0.9416756100993018 1.1415615642802523 1.1521253839061683 1.1266211346411226 1.1337615027791519 1.1874063651694713 1.0 21.616059485290158 -5.613857897907924 2.6058027680705704 1.1335605011014542 0.8592632840092393 0.8447781932149733 0.05112452211437139 0.09351659934598479 1.2864803581948236 0.015399778916784573 0.021348666019595647 2.432999961688067e-06 5.613857897907924 -0.2742972170922149 KDFDTALK ddPTM_KYSE-520_SHP099_60min_R1 1 KDFDTALK 8 1 P31948;P31948-2;P31948-3 P31948 STIP1 Stress-induced-phosphoprotein 1 0 90.10799999999999 0.010767 670390000.0 2132000.0 2146500.0 1843000.0 1281600.0 2226500.0 1875900.0 1364400.0 1837100.0 1739900.0 1724700.0 False True 2013733.7099633664 2043378.9180378125 1961802.7289042627 1403402.8786729106 2401712.8829479143 1864191.8122702276 1502326.8672607825 1830727.5288823636 1423978.0193097147 1709420.4997962967 1.1780212710701277 1.1953635271609953 1.1476419810912768 0.8209816594805943 1.4049865923768403 1.0905402225446426 0.8788515566765506 1.0709638319538828 0.8330179844452569 1.0 20.70507589808165 -6.601874381525914 6.487868520482353 0.9536107940907876 1.1444891369722194 0.3034582670551831 0.14576121117715116 0.28818589282942036 18.997188055124337 0.055466590231186365 0.04278558784560194 2.5010686842604087e-07 6.601874381525914 0.1908783428814318 KDGADFAK ddPTM_KYSE-520_SHP099_60min_R1 6 KDGADFAK 8 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8;H3BU78;P09972;J3KSV6;K7EKH5;A8MVZ9;C9J8F3;J3QKP5 P04075 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C 0 ;;;;; 111.06 0.0026344000000000003 19641200000.0 29926400.0 29446500.0 19641700.0 18369400.0 27133200.0 28983400.0 19984400.0 24584800.0 25756700.0 23709200.0 False True 28266322.93520066 28031845.939902358 20907835.409831177 20115222.253038507 29268428.47321017 28802503.849753644 22004618.180948693 24499521.06693547 21079932.55356889 23499154.93347846 1.2028655079392059 1.1928874046430633 0.8897271186567005 0.8559976862989666 1.2455098302923404 1.2256825375758378 0.9364004043226019 1.0425703024763593 0.8970506647256925 1.0 24.48610554035495 -4.674141505783491 10.493328656802065 1.0209535842567354 1.1994172432582992 0.2549619491382844 0.12657473596471877 0.5907881389343782 66.52664447039538 0.03474147732102189 0.09204414916608179 2.1176710239654234e-05 4.674141505783491 0.1784636590015638 KDGLQGQLEEMTELES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KDGLQGQLEEMTELESPK 18 1 H7BZ70;A0A669KBF3;Q53RY4-2;Q53RY4 H7BZ70 KRTCAP3 Keratinocyte-associated protein 3 1 KDGLQGQLEEMTELES(1)PK;KDGLQGQLEEMTELES(1)PK 167.85 1.3158000000000001e-08 931250000.0 506220.0 551650.0 462530.0 536020.0 595920.0 530370.0 494420.0 578640.0 699290.0 548080.0 True False 478138.96747544856 525147.9059564682 492345.42387416563 586963.1796397108 642815.5136790131 527059.7640992381 544400.7986741982 576632.8328955912 572316.5636663551 543224.4375997874 0.8801867780250903 0.9667236405578705 0.9063388717370147 1.080516889544184 1.1833332029745651 0.9702431032521803 1.0021655157481657 1.0615001700649132 1.0535545237896697 1.0 19.051188856837932 -5.258434264933854 24.997625382940065 1.0529659267667044 0.9226471442235041 0.5186431779109304 0.05836829782604804 223.66885556124015 1860548.153039737 0.016817725644497992 0.027589885829171146 5.5152567531230126e-06 5.258434264933854 -0.13031878254320028 KDGNAS(ph)GTTLLEALDCILPPTRPTDKPLR ddPTM_KYSE-520_SHP099_60min_R1 1 KDGNASGTTLLEALDCILPPTRPTDKPLR 29 3 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 1 KDGNAS(0.748)GT(0.199)T(0.053)LLEALDCILPPTRPTDKPLR 191.82 2.8993000000000004e-15 186980000.0 48053.0 48476.0 53895.0 56222.0 42459.0 49376.0 43931.0 40637.0 57867.0 42284.0 True False 45387.40429871941 46147.14019604058 57369.15793504893 61565.3219762393 45800.281741336454 49067.826068902745 48371.97420524292 40496.03973174712 47359.811508359846 41909.39665645421 1.082988730922939 1.1011167871092158 1.3688853219559258 1.4690099807666401 1.092840398461881 1.170807264803372 1.154203545371094 0.9662758942512853 1.1300523340048192 1.0 15.354986131583312 -6.761004169919749 1.3134896787619248 1.03548182825859 1.2382215066477296 0.3013002441267316 0.12307576642471314 0.6036558106702875 2.0985465716009966 0.08427222817206359 0.048832125600105344 1.7337873505501696e-07 6.761004169919749 0.20273967838913953 KDGNASGTTLLEALDCILPPTRPTDK ddPTM_KYSE-520_SHP099_60min_R1 2 KDGNASGTTLLEALDCILPPTRPTDK 26 2 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ; 184.59 2.5522e-15 405320000.0 312145.0 273157.0 213990.0 239695.0 346520.0 316074.0 200437.0 268776.0 237498.0 184482.0 False True 294829.6946043695 260034.1277029838 227784.13779610564 262475.5407330706 373789.152570901 314101.26492430276 220699.1280366093 267843.67878879013 194374.35003736906 182847.63300482414 1.6124337502175428 1.422135596888603 1.2457592917820048 1.4354877688033598 2.044265744260628 1.71783063178081 1.2070111294838939 1.4648463006448846 1.0630400122939563 1.0 17.480282425292714 -7.6377351095623265 1.3027752144691602 0.9922403610826436 1.5503641813395588 0.43306100677127735 0.2255375794985316 0.46021090277298315 1.470493682334022 0.22972681855162033 0.07489936086152975 2.3028459703741704e-08 7.6377351095623265 0.5581238202569152 KDGNASGTTLLEALDCILPPTRPTDKPLR ddPTM_KYSE-520_SHP099_60min_R1 5 KDGNASGTTLLEALDCILPPTRPTDKPLR 29 3 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ;;;; 257.04 1.3781e-40 19470890000.0 1261246.0 1143218.0 998534.0 1102540.0 1639385.0 1178262.0 804917.0 971357.0 937367.0 633652.0 False True 1191282.170148433 1088296.0912747968 1062901.0993508876 1207325.070109262 1768395.2726753044 1170908.0298039033 886285.8655928967 967987.5892834283 767164.781899126 628038.3362537961 1.8968303388203116 1.7328497775572194 1.6924143607076867 1.9223747985049287 2.81574415221793 1.8643894205380618 1.4111970789546522 1.5412874237222607 1.221525403170783 1.0 19.260493100170248 -6.749472302666539 3.9128551103892275 1.324892598962307 2.0052224752631234 0.5355725972738978 0.31875924153646884 0.20273780401096084 6.826114985231484 0.1456081271303665 0.10311295298771973 1.780441453718434e-07 6.749472302666539 0.6803298763008163 KDGS(ph)SPPLLEK ddPTM_KYSE-520_SHP099_60min_R1 2 KDGSSPPLLEK 11 1 H7BYY2;Q6W2J9-3;Q6W2J9-4;Q6W2J9-2;Q6W2J9 H7BYY2 BCOR BCL-6 corepressor 1 KDGS(0.629)S(0.371)PPLLEK;KDGS(0.591)S(0.409)PPLLEK 83.823 0.0034292000000000003 1028600000.0 2306150.0 2156810.0 2060630.0 1963600.0 1978910.0 2272310.0 2062070.0 2113150.0 2595510.0 2231220.0 True False 2178223.262303949 2053193.6101621902 2193461.5069245733 2150219.9536221335 2134638.9585423153 2258127.6704194043 2270524.1594638266 2105819.975862918 2124230.8114825906 2211453.126662892 0.9849737423966625 0.9284364137803286 0.9918643449768849 0.9723108881203556 0.9652652967433726 1.0211058254836018 1.0267114107410784 0.9522336017316472 0.9605588225548689 1.0 21.076563232927388 KDGSS(ph)PPLLEK ddPTM_KYSE-520_SHP099_60min_R1 1 KDGSSPPLLEK 11 1 H7BYY2;Q6W2J9-3;Q6W2J9-4;Q6W2J9-2;Q6W2J9 H7BYY2 BCOR BCL-6 corepressor 1 KDGS(0.374)S(0.626)PPLLEK 79.471 0.0073604 1811800000.0 2094800.0 1728300.0 1859300.0 1500300.0 1541100.0 1739200.0 1645100.0 1681200.0 2058700.0 1548100.0 True False 1978597.268119728 1645269.8737688097 1979153.452985182 1642888.0609183563 1662375.8023404584 1728345.0076765167 1811402.7626287846 1675368.3095950317 1684891.9756037204 1534385.038403576 1.289505058116524 1.072266629685468 1.2898675387530874 1.070714338187024 1.0834150234350879 1.1264089289313868 1.1805399018446028 1.0918825898733602 1.0980894191699997 1.0 20.549229127322704 -1.0000001106162528 0.05418940104901349 0.7887065126286629 1.7971606385113625 0.3869743142166049 0.07088066055029776 471.76557538117225 1.9260957503871545 7.930469172156603 38.72619210604137 0.09999997452966976 1.0000001106162528 1.0084541258826998 KDHPYTWR ddPTM_KYSE-520_SHP099_60min_R1 2 KDHPYTWR 8 1 Q9Y570;Q9Y570-4;Q9Y570-2;Q9Y570-3 Q9Y570 PPME1 Protein phosphatase methylesterase 1 0 ; 129.38 0.0016469999999999998 4193500000.0 8293400.0 9064200.0 7149800.0 6934600.0 9169300.0 8830800.0 8002100.0 7854000.0 8104400.0 5425200.0 False True 7833348.569516984 8628742.226358425 7610687.548084484 7593662.299036494 9890871.743819589 8775683.70158106 8811030.360970043 7826756.307137381 6632845.25529839 5377136.948741731 1.4567879978117377 1.6047094036497584 1.4153791544895302 1.4122129250982602 1.8394308789427591 1.6320364880486449 1.6386099972833785 1.4555620178074262 1.233527306171828 1.0 22.358406784987125 -7.876920274267876 1.9837859665928919 1.005811230348359 1.5728520769459793 0.7023927476687831 0.12110635315603593 0.17596441601045001 1.4667959429269923 0.12256223445390042 0.034885060132453447 1.3276381569099512e-08 7.876920274267876 0.5670408465976202 KDHS(ph)DS(ph)DDQMLVAK ddPTM_KYSE-520_SHP099_60min_R1 8 KDHSDSDDQMLVAK 14 1 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 2 KDHS(1)DS(1)DDQMLVAK;KDHS(1)DS(1)DDQMLVAK;KDHS(1)DS(1)DDQMLVAK;KDHS(1)DS(1)DDQMLVAK;KDHS(1)DS(1)DDQMLVAK;KDHS(1)DS(1)DDQMLVAK;KDHS(1)DS(1)DDQMLVAK;KDHS(1)DS(1)DDQMLVAK 176.48 8.611900000000001e-09 10027290000.0 13472530.0 12648890.0 11441130.0 11556050.0 12367680.0 11947100.0 12055020.0 12494800.0 15056420.0 11538770.0 True False 12725181.904077277 12041218.338029029 12178643.546255229 12654333.517546868 13340946.053526731 11872533.717348278 13273659.067257453 12451458.455108246 12322553.669461006 11436545.474827232 1.1126770694950183 1.0528719852102832 1.0648883067934645 1.1064821580432733 1.166518865586749 1.0381223721341983 1.1606353593813672 1.0887429672286024 1.07747166280097 1.0 23.447148001383137 -8.218285550112412 2.281252740078809 1.0000961311058563 1.098645385554384 0.35947690192061466 0.03960569187047505 1.0186028014506905 8.52834656823227 0.037702056108165585 0.01029991238246958 6.0494299187016105e-09 8.218285550112412 0.0985492544485278 KDHYDATYHK ddPTM_KYSE-520_SHP099_60min_R1 1 KDHYDATYHK 10 1 P23229-7;P23229-4;P23229-2;P23229-9;P23229-6 P23229-7 0 89.40299999999999 0.0039336 69303000.0 47626.0 59811.0 57678.0 90097.0 97467.0 103090.0 83427.0 108510.0 109680.0 47103.0 False True 44984.0908399228 56937.5897818587 61396.01616806297 98659.79179134924 105137.09838863001 102446.57707070606 91860.615329057 108133.60413642434 89764.87680779917 46685.70406557949 0.9635517283135233 1.219593683365648 1.3150924334742788 2.1132762965888157 2.2520191243328735 2.194388606130887 1.9676390699821131 2.3162037780244007 1.9227487001525412 1.0 15.510693220037297 -5.159020781803278 3.5181263904131406 2.0442207278311657 1.120903873930991 0.5055891372901593 0.3602676385770246 0.17236194180142 3.959662597260039 0.09416051043642495 0.17490029902701146 6.933926250886354e-06 5.159020781803278 -0.9233168539001748 KDIDHETVVEEQIIGENS(ph)PPDYSEYMTGK ddPTM_KYSE-520_SHP099_60min_R1 5 KDIDHETVVEEQIIGENSPPDYSEYMTGK 29 1 P25490;A0A494C032;H0YJU4;H0YJV7 P25490 YY1 Transcriptional repressor protein YY1 1 KDIDHETVVEEQIIGENS(0.779)PPDY(0.096)S(0.124)EY(0.002)MTGK;KDIDHETVVEEQIIGENS(1)PPDYSEYMTGK;KDIDHETVVEEQIIGENS(1)PPDYSEYMTGK;KDIDHETVVEEQIIGENS(0.996)PPDY(0.002)S(0.002)EYMTGK;KDIDHETVVEEQIIGENS(0.919)PPDY(0.004)S(0.077)EYMT(0.001)GK 362.77 1.9857999999999996e-93 5614566000.0 1581338.0 2096572.0 1769982.0 2983475.0 1778695.0 1501801.0 1630614.0 1667713.0 2255810.0 1582483.0 True False 1493618.0288208504 1995849.5341012692 1884077.8717913318 3267023.5669855336 1918668.1771098347 1492427.7028942057 1795452.3763790503 1661928.0928501387 1846211.768342463 1568463.431773146 0.9522810660190637 1.272487132100341 1.2012252460749973 2.082945321391502 1.2232788716921394 0.9515221538872718 1.1447205844954216 1.0595899522957517 1.177083080767349 1.0 20.580920462921032 -5.997351647918098 24.99456042179521 1.0765476615444922 1.3941719836233635 0.21940455838148132 0.2753625509038131 133.30995014038007 1258124.2523153895 0.08908103424719788 0.10043833667077941 1.0061166870201266e-06 5.997351647918098 0.31762432207887126 KDIEVLS(ph)EDT(ph)DYEEDEVTKK ddPTM_KYSE-520_SHP099_60min_R1 1 KDIEVLSEDTDYEEDEVTKK 20 2 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4;H7C5R6 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 2 KDIEVLS(1)EDT(0.991)DY(0.009)EEDEVTKK 98.7 0.0038450000000000003 314480000.0 156600.0 145260.0 122780.0 140730.0 129510.0 111290.0 134500.0 121870.0 186680.0 124280.0 True False 147913.0858256396 138281.49156029482 130694.59525494586 154104.9368879826 139701.70018889956 110595.39782907064 148096.572593503 121447.26141467171 152783.61781983907 123178.97588837697 1.2007981456159884 1.1226062772725398 1.0610138159727796 1.2510652550613044 1.1341359122476813 0.8978431346051343 1.2022877404639734 0.98594147693455 1.240338432089981 1.0 16.910396513181468 -6.020681623075125 24.954227195274544 1.066635592833068 1.1547044998275826 0.15511128613637382 0.10451563400468782 1483.0476206930982 1789427.0093347968 0.03263022031104781 0.03299878687273302 9.53494905415395e-07 6.020681623075125 0.08806890699451464 KDIS(ph)ENKR ddPTM_KYSE-520_SHP099_60min_R1 5 KDISENKR 8 2 E9PKE3;P11142;E9PNE6;A8K7Q2;P11142-2;E9PN89 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 1 KDIS(1)ENKR;KDIS(1)ENKR;KDIS(1)ENKR;KDIS(1)ENKR;KDIS(1)ENKR 123.79 0.00055899 4784980000.0 5370570.0 4615190.0 3326140.0 3853190.0 5395600.0 5872040.0 4383190.0 4580020.0 5584920.0 7192280.0 True False 5072653.7761341315 4393469.344858576 3540548.306412165 4219396.019096187 5820203.023235473 5835390.420237359 4826285.621012009 4564132.979604701 4570839.312376124 7128561.994709175 0.7115956598117628 0.6163191605992081 0.4966707603917821 0.5919000244688658 0.8164624264410175 0.8185929258339045 0.6770349510313696 0.6402599827275408 0.6412007520967911 1.0 22.765179648470635 -5.745011404838884 24.91233506187311 0.7458270448104188 0.5973175657569418 0.323980289480607 0.1119335634286278 313.33635188298797 475159.2325108962 0.03363811494656774 0.04329746805951042 1.798823676297906e-06 5.745011404838884 -0.148509479053477 KDKS(ph)PVREPIDNLTPEER ddPTM_KYSE-520_SHP099_60min_R1 15 KDKSPVREPIDNLTPEER 18 3 Q5QP22;Q5QP23;G3XAC6;Q14498-2;Q14498;H0Y4X3;Q14498-3 Q5QP22;Q14498-3 RBM39 RNA-binding protein 39 1 KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER;KDKS(1)PVREPIDNLTPEER 211.68 4.913e-18 245433860000.0 24703280.0 22104790.0 21870630.0 20896950.0 22717800.0 20067820.0 21864720.0 23291490.0 26651240.0 20034640.0 True False 23332939.81363222 21042842.70843375 23280445.804045256 22882989.845102876 24505561.61339959 19942569.291600134 24075019.27670345 23210697.25746464 21812046.639087223 19857148.67631408 1.1750397901519527 1.0597111927521592 1.1723962077100496 1.1523804458591818 1.2340926692375636 1.0043017563436965 1.2124106874125646 1.1688836920051229 1.0984480699943078 1.0 24.243155142774377 -10.081253701570855 5.849450077095295 0.999999398907989 1.1422697113447156 0.2922914308218578 0.06626811355187051 4.94999516475449e-07 7.771105363950528e-08 0.061132947837592405 0.014826854968617671 8.293661356110921e-11 10.081253701570855 0.1422703124367266 KDLGST(ph)EDGDGT(ph)DDFLTDKEDEK ddPTM_KYSE-520_SHP099_60min_R1 1 KDLGSTEDGDGTDDFLTDKEDEK 23 2 Q15527 Q15527 SURF2 Surfeit locus protein 2 2 KDLGS(0.441)T(0.56)EDGDGT(0.985)DDFLT(0.014)DKEDEK 76.859 0.0091386 297190000.0 331700.0 280980.0 272740.0 293090.0 281010.0 277100.0 296060.0 277640.0 362200.0 318720.0 True False 313299.9397724433 267481.2990404214 290321.2567994294 320945.1854792782 303123.8882718142 275370.516114974 325988.63406715577 276676.9316416633 296433.6103189719 315896.3887604078 0.9917806943024797 0.8467374384684501 0.9190394924698684 1.0159824451893298 0.959567437479379 0.8717115038748646 1.0319479603624164 0.8758470862150609 0.9383887276527322 1.0 18.269091919127707 -4.9032716330673844 0.005828176489934503 1.8645585553823194 1.4228771719980594e-06 0.040571963943478284 0.060816482362130345 61486.47893256333 69.6821277530358 10772.169262193589 11527.327931107271 1.2494772898889327e-05 4.9032716330673844 -1.8645571325051473 KDLGST(ph)EDGDGTDDFLT(ph)DKEDEK ddPTM_KYSE-520_SHP099_60min_R1 1 KDLGSTEDGDGTDDFLTDKEDEK 23 2 Q15527 Q15527 SURF2 Surfeit locus protein 2 2 KDLGS(0.284)T(0.378)EDGDGT(0.338)DDFLT(1)DKEDEK 196.9 2.319e-15 1843400000.0 2738000.0 2533200.0 2321900.0 2447600.0 2548500.0 2613500.0 2511600.0 2735800.0 3198100.0 2626500.0 True False 2586117.681932319 2411501.2695892784 2471573.389171356 2680219.168102226 2749052.451018532 2597188.177071397 2765497.0388538428 2726310.1483405195 2617405.6575403204 2603231.2533860817 0.993426027199273 0.9263492309615537 0.9494252137440823 1.0295739821869474 1.0560154605714638 0.9976786248602293 1.062332451355099 1.0472792783178007 1.0054449270059285 1.0 21.311872045989066 -5.26451439953037 21.678576749946565 1.0315950176337747 0.9533950432347097 0.6068601178770257 0.02640707878182893 24.77274027702991 174650.8963309918 0.007098114601256949 0.011092746916851668 5.438580991840261e-06 5.26451439953037 -0.07819997439906501 KDLGSTEDGDGT(ph)DDFLT(ph)DKEDEK ddPTM_KYSE-520_SHP099_60min_R1 8 KDLGSTEDGDGTDDFLTDKEDEK 23 2 Q15527 Q15527 SURF2 Surfeit locus protein 2 2 KDLGSTEDGDGT(1)DDFLT(1)DKEDEK;KDLGSTEDGDGT(1)DDFLT(1)DKEDEK;KDLGS(0.04)T(0.05)EDGDGT(0.91)DDFLT(1)DKEDEK;KDLGS(0.267)T(0.325)EDGDGT(0.408)DDFLT(1)DKEDEK;KDLGS(0.074)T(0.081)EDGDGT(0.845)DDFLT(1)DKEDEK;KDLGS(0.001)T(0.001)EDGDGT(0.999)DDFLT(1)DKEDEK;KDLGSTEDGDGT(1)DDFLT(1)DKEDEK;KDLGSTEDGDGT(1)DDFLT(1)DKEDEK 181.56 1.5424000000000002e-11 14135160000.0 13451410.0 12163710.0 11280810.0 12430770.0 12635060.0 12061310.0 11801870.0 13759100.0 14851660.0 13494330.0 True False 12705233.472578958 11579347.113499071 12007989.062534183 13612186.643352708 13629367.338342646 11986030.89037421 12994918.194751553 13711372.893498067 12154972.923881436 13374780.734629875 0.9499395709480806 0.8657597715615568 0.8978082931440658 1.0177502654759898 1.0190348244778022 0.8961665337316577 0.971598596835701 1.0251661814534792 0.9087979208817889 1.0 23.67301190446139 -5.240982851462312 24.097832839861752 0.976146211789901 0.9006282463192233 0.3414586875820913 0.045990090336827084 574.7597064642173 677066.1010551916 0.01245976735497644 0.021541436515979864 5.741391321987206e-06 5.240982851462312 -0.07551796547067768 KDLGSTEDGDGT(ph)DDFLTDKEDEK ddPTM_KYSE-520_SHP099_60min_R1 5 KDLGSTEDGDGTDDFLTDKEDEK 23 2 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 KDLGS(0.007)T(0.012)EDGDGT(0.98)DDFLTDKEDEK;KDLGSTEDGDGT(0.996)DDFLT(0.004)DKEDEK;KDLGSTEDGDGT(1)DDFLTDKEDEK;KDLGSTEDGDGT(1)DDFLTDKEDEK;KDLGSTEDGDGT(1)DDFLTDKEDEK 236.79 7.5087e-28 8113700000.0 1655480.0 1460490.0 1377100.0 1507650.0 1519060.0 1522520.0 1509970.0 1529480.0 1766460.0 1403360.0 True False 1563647.2242824368 1390325.8681598175 1465870.0694379064 1650936.6027084976 1638601.3797309059 1513017.3879298833 1662612.503487076 1524174.5908633145 1445715.392832828 1390927.322197559 1.1241760797480012 0.9995675877321963 1.0538797002865279 1.1869323266295062 1.1780639819067187 1.0877760209206555 1.1953266550694217 1.095797434229155 1.0393895998453089 1.0 20.40761560843909 -3.835556592893575 19.976598649180296 1.1009329389096283 45.93462276495029 0.0062122274530647115 0.06994192338519777 6440.705954396626 783933.0549206762 0.017520382982923195 25688.26515054786 0.00014603044448388685 3.835556592893575 44.83368982604066 KDLGSTEDGDGTDDFLT(ph)DKEDEK ddPTM_KYSE-520_SHP099_60min_R1 6 KDLGSTEDGDGTDDFLTDKEDEK 23 2 Q15527 Q15527 SURF2 Surfeit locus protein 2 1 KDLGSTEDGDGT(0.217)DDFLT(0.783)DKEDEK;KDLGSTEDGDGT(0.01)DDFLT(0.99)DKEDEK;KDLGSTEDGDGT(0.003)DDFLT(0.997)DKEDEK;KDLGSTEDGDGTDDFLT(1)DKEDEK;KDLGSTEDGDGTDDFLT(1)DKEDEK;KDLGSTEDGDGTDDFLT(1)DKEDEK 325.34 2.8585999999999993e-61 5781370000.0 5810110.0 5476960.0 4986510.0 5218170.0 5523840.0 5496640.0 5340950.0 5874730.0 6485260.0 5909900.0 True False 5487811.616132866 5213838.620515439 5307948.4132980965 5714103.307899978 5958534.781649679 5462333.430884923 5880865.348648838 5854351.932802296 5307700.264100533 5857542.88383263 0.9368794603757392 0.8901067775203362 0.90617320582467 0.9755119887677547 1.0172413416034556 0.9325298233772181 1.0039816123037837 0.9994552406881833 0.9061308417818478 1.0 22.48186418060912 -5.26447930032112 19.560764292915326 0.9774067457231577 0.9089584411062452 0.43698940356419114 0.03395602880250555 11.228523403851199 72259.92196349349 0.00916800742248688 0.014358329335568572 5.439020549822635e-06 5.26447930032112 -0.06844830461691243 KDLSLGLDDS(ph)RTNT(ph)PQGVLPSSQLK ddPTM_KYSE-520_SHP099_60min_R1 1 KDLSLGLDDSRTNTPQGVLPSSQLK 25 2 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 2 KDLS(0.001)LGLDDS(0.729)RT(0.36)NT(0.91)PQGVLPSSQLK 82.50299999999999 0.023765 153990000.0 241510.0 239000.0 206270.0 221400.0 183250.0 156200.0 163420.0 191310.0 207980.0 196860.0 True False 228112.9588617512 227518.0812536864 219566.49424366927 242441.78943366252 197670.73245012615 155225.09786055202 179940.0884255038 190646.39026208958 170216.07474914362 195115.97355476246 1.169114730618032 1.16606588947383 1.1253127575536217 1.2425522370961457 1.0130935404663148 0.7955529987245539 0.9222212059178266 0.9770926838472381 0.8723841090405123 1.0 17.573972366299202 -5.954930626312712 5.189189384218979 0.9112798389730973 1.169513469594852 0.8141091458656166 0.05903956635482799 0.07783500444931937 4.834602464582112 0.018351274104261964 0.020639013506987065 1.1093520076884408e-06 5.954930626312712 0.25823363062175464 KDLTEYLSR ddPTM_KYSE-520_SHP099_60min_R1 1 KDLTEYLSR 9 1 A0A087WUK2;O14979-3;O14979-2;O14979 A0A087WUK2 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like 0 110.93 0.017385 0.0 266110.0 292310.0 188330.0 169120.0 267750.0 261640.0 188580.0 192580.0 249010.0 244870.0 False True 251348.34782286672 278266.9888337448 200470.053138654 185193.11395221774 288820.4017108934 260007.00770957008 207643.50676344073 191911.98492851004 203796.06103127328 242700.64230597735 1.035631160407013 1.146544097246056 0.8259972088821981 0.7630516021409669 1.1900273479572088 1.071307456128502 0.8555540059167235 0.7907353812709029 0.8397013666504586 1.0 17.888818401015772 -6.780627808183332 24.14915868217289 0.8540588413541881 1.0010589345885088 0.19177555899167653 0.1325957203578263 281.77020392560655 354610.79492092517 0.05928707252037688 0.04005100120244502 1.657189572057696e-07 6.780627808183332 0.14700009323432073 KDLYANTVLSGGTTMYPGIADR ddPTM_KYSE-520_SHP099_60min_R1 3 KDLYANTVLSGGTTMYPGIADR 22 1 P60709;A0A2R8Y793;P63261 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;; 175.47 1.7674000000000001e-09 4631270000.0 2200090.0 1816850.0 1245130.0 1328300.0 1982990.0 1976620.0 1469150.0 1473240.0 1402360.0 1249980.0 False True 2078046.6219293205 1729565.7988525503 1325393.0720784385 1454541.2326320445 2139040.0313302903 1964283.1813900417 1617666.019522267 1468129.6742968026 1147726.7746187567 1238906.149669726 1.6773236798310325 1.3960426294708659 1.069809099286309 1.1740527989305758 1.7265553423078308 1.585497966826374 1.3057211960353194 1.1850208949953023 0.9264033235485382 1.0 20.24063547307848 -7.42739944989525 2.1667691223207433 0.9669527512037837 1.418680212002717 0.47002951839232876 0.19622264234232265 0.3372654253648879 2.9163251627323814 0.17182701213389465 0.06121266524477502 3.737666517536584e-08 7.42739944989525 0.45172746079893344 KDNDFIYHDR ddPTM_KYSE-520_SHP099_60min_R1 8 KDNDFIYHDR 10 1 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 0 ;;;;;;; 140.39 0.00048708 44668900000.0 69214340.0 68202370.0 48231350.0 44038740.0 65141360.0 70643800.0 56901540.0 62774190.0 60092780.0 52837700.0 False True 65374882.58483389 64925825.771355465 51340419.993888564 48224168.60887005 70267614.42836206 70202885.84021294 62653702.96871461 62556440.986496024 49181445.96770765 52369599.085108556 1.2483365106268958 1.2397617492897193 0.9803477760150996 0.9208428067302644 1.3417634592574694 1.3405274637700126 1.1963754556702415 1.1945182334665634 0.9391220636953956 1.0 25.642226224505013 -7.758766226418446 24.965615347000668 0.9695609698252929 1.1802346519270497 0.30015544907950875 0.13020107521788674 90.45272867722106 844840.964981254 0.10819567269931228 0.03666870943681402 1.742744711792114e-08 7.758766226418446 0.21067368210175674 KDPELWGSVLLESNPYR ddPTM_KYSE-520_SHP099_60min_R1 4 KDPELWGSVLLESNPYR 17 1 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ;;; 165.74 8.957700000000001e-08 2109205000.0 447238.0 371164.0 307837.0 252185.0 428042.0 364102.0 375468.0 367758.0 330536.0 313204.0 False True 422428.81659314997 353332.7243114775 327680.6655766149 276152.5865778151 461726.4701741713 361829.5043612206 413423.96965455246 366482.33333336224 270518.99453448824 310429.256229025 1.3607893203258368 1.1382069093732572 1.0555727561156876 0.8895829920556146 1.4873806540757355 1.1655779766269003 1.3317815939021584 1.180566347982946 0.8714352436385949 1.0 18.243905004344395 -7.7485779184753625 21.473012936647567 0.9357179931910962 1.1965495843899039 0.3047604077670293 0.16025950479372983 46.5783737264169 77771.78057948656 0.11288740691892105 0.04177352488698113 1.7841118653207565e-08 7.7485779184753625 0.2608315911988077 KDPELWGSVLLESNPYRR ddPTM_KYSE-520_SHP099_60min_R1 1 KDPELWGSVLLESNPYRR 18 2 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 105.77 0.00023266 519570000.0 86348.0 95897.0 70403.0 61270.0 71528.0 52688.0 58998.0 33772.0 62995.0 61613.0 False True 81558.10430952956 91289.96417566852 74941.2900287829 67093.08237850279 77156.8466613512 52359.15464837875 64962.09360499248 33654.85281444407 51556.69597472012 61067.156754188654 1.3355477583117608 1.494910996808556 1.2271946822486148 1.0986770294312223 1.2634753403032628 0.8574028566474464 1.0637812051162292 0.5511121624658848 0.8442622633021767 1.0 15.89810905538196 -5.977369433670141 0.7561665384443692 0.7924067543090564 1.4039991036009523 0.6527434899244241 0.15414457931505857 0.3976050888794884 0.5053713991373809 0.09513026900600262 0.12764952541271962 1.0534903609563408e-06 5.977369433670141 0.6115923492918959 KDPFS(ph)PDK ddPTM_KYSE-520_SHP099_60min_R1 5 KDPFSPDK 8 1 H0YHD0;Q5PSV4-2;Q5PSV4 H0YHD0 BRMS1L Breast cancer metastasis-suppressor 1-like protein 1 KDPFS(1)PDK;KDPFS(1)PDK;KDPFS(1)PDK;KDPFS(1)PDK;KDPFS(1)PDK 101.39 0.0026218000000000005 5569100000.0 6610030.0 5986590.0 5477850.0 5491520.0 6275240.0 6215110.0 5564450.0 6205790.0 7113580.0 6159500.0 True False 6243358.45913188 5698985.230345216 5830960.975869897 6013432.409714304 6769065.68676851 6176319.193112006 6126958.909798639 6184263.562932274 5821933.1907587815 6104931.622018482 1.0226745925563094 0.9335051697861527 0.9551230606481386 0.9850122461692822 1.1087864870352873 1.0116934268085909 1.0036081137585082 1.012994730461463 0.9536442914054897 1.0 22.541543705793643 -5.533637955003824 24.995401564186512 1.0179216387704788 0.9672957253194745 0.1922477460457439 0.04163402402322904 317.6160501770462 737870.3771701911 0.012535692213212088 0.01619771320456816 2.9265910828689018e-06 5.533637955003824 -0.05062591345100431 KDPFS(ph)PDKK ddPTM_KYSE-520_SHP099_60min_R1 1 KDPFSPDKK 9 2 H0YHD0;Q5PSV4-2;Q5PSV4 H0YHD0 BRMS1L Breast cancer metastasis-suppressor 1-like protein 1 KDPFS(1)PDKK 99.01100000000001 0.0020248 1603400000.0 1964100.0 1674300.0 1622400.0 1683400.0 1855200.0 1905300.0 1699700.0 1898000.0 2160300.0 1746400.0 True False 1855147.4576637216 1593864.1148244634 1726982.4999317836 1843389.829867337 2001193.6853559273 1893408.315964852 1871522.263473434 1891416.280996529 1768043.9767312952 1730928.2546786396 1.0717645013011496 0.9208146614490251 0.9977204400377713 1.064971829354982 1.156139013819186 1.0938687440377928 1.0812246310121598 1.0927178962409885 1.021442669245437 1.0 20.72311449693778 -5.284223598073602 4.40012760464106 1.0822747599909743 0.9881266292999149 0.29422870677796775 0.052749494898461445 0.20685297396016192 10.039605776490491 0.014570643403449109 0.02342711439481846 5.197283436342844e-06 5.284223598073602 -0.09414813069105943 KDPSGASNPSADS(ph)PLHR ddPTM_KYSE-520_SHP099_60min_R1 1 KDPSGASNPSADSPLHR 17 1 P55317-2;P55317 P55317-2 FOXA1 Hepatocyte nuclear factor 3-alpha 1 KDPSGASNPS(0.273)ADS(0.727)PLHR 101.75 0.00022172 0.0 102120.0 104880.0 115010.0 102970.0 97969.0 99231.0 81661.0 97324.0 124440.0 95342.0 True False 96455.20002882698 99841.40737191052 122423.72862250631 112756.23784094062 105678.60293264061 98611.66252112962 89916.0908145579 96986.40575959245 101844.83287711992 94497.34405495366 1.0207186349357582 1.0565525239931515 1.2955256028287148 1.193221237788109 1.1183235252747912 1.043538985220403 0.9515197671827518 1.0263400175902437 1.0777533897449374 1.0 16.527986161025023 -6.260630343499071 3.302684609021246 1.0145908465074007 1.1467522429054682 0.3790234028457399 0.07554190933638984 0.28494137095000466 6.533022086302704 0.02989810512220515 0.02786559314142686 5.487438380494422e-07 6.260630343499071 0.13216139639806745 KDQEWSEK ddPTM_KYSE-520_SHP099_60min_R1 1 KDQEWSEK 8 1 R4GNH1;Q92805 R4GNH1 GOLGA1 Golgin subfamily A member 1 0 73.781 0.045319 411000000.0 296650.0 328700.0 202880.0 172670.0 385710.0 420510.0 296860.0 368860.0 405140.0 363410.0 False True 280194.2331428859 312908.7586112411 215957.96941947722 189080.50488487136 416063.1826103037 417885.4411097357 326869.50587440387 367580.51075257105 331576.78874828306 360190.47012870206 0.7779057370473124 0.868731364545635 0.5995660277805569 0.5249458843742028 1.1551199077022702 1.1601790601523085 0.9074907111162823 1.0205170353930475 0.9205595823504301 1.0 18.458400485553458 -5.766483580871518 24.99999988112728 1.0289892929880924 0.6986960250742118 0.6641198742129866 0.11651310225015504 83.6151280424974 414411.7028242278 0.038921822202937856 0.045497760312405974 1.712049901992058e-06 5.766483580871518 -0.3302932679138806 KDQYFLDKK ddPTM_KYSE-520_SHP099_60min_R1 1 KDQYFLDKK 9 2 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 0 80.979 0.0065490999999999995 1200300000.0 1718900.0 1770900.0 1138800.0 1187300.0 2040800.0 2266400.0 1749500.0 2037500.0 1957600.0 1659700.0 False True 1623549.1904578023 1685823.3058249091 1212208.870144425 1300140.6350252386 2201399.3494363823 2252254.5569216064 1926356.5334745955 2030432.3880560726 1602149.1870801207 1644996.349227062 0.9869621845791104 1.0248188736814101 0.7369067236617323 0.7903608027070325 1.3382396565626171 1.3691547449207886 1.171040005274016 1.2343081423919977 0.9739530351133764 1.0 20.6496529514866 -5.756742477845971 24.99999897091823 1.2017294887820862 0.8842050724404189 0.5074932280728988 0.14215531199397563 97.14744419669162 517079.2542089093 0.04444895390230343 0.05548673430606697 1.7508845970859937e-06 5.756742477845971 -0.3175244163416673 KDRDAS(ph)PSKEER ddPTM_KYSE-520_SHP099_60min_R1 1 KDRDASPSKEER 12 3 Q9BUQ8;F8W1J5;F8VVA2;Q9BUQ8-2 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 1 KDRDAS(0.971)PS(0.029)KEER 101.2 0.0016684 479670000.0 1088000.0 1067300.0 1114400.0 864470.0 1005300.0 903930.0 698240.0 785300.0 1422700.0 674250.0 True False 1027646.4711257723 1016025.30595004 1186236.0071030443 946628.9688876175 1084411.3906254391 898288.2375741926 768824.9133657054 782575.9775903984 1164373.5433484283 668276.6695585615 1.537756019231671 1.5203662677932304 1.7750672156288612 1.41652254524002 1.6226982625949826 1.3441861409999065 1.1504590065572127 1.1710359095841827 1.7423525261140267 1.0 19.350085983069953 -6.36648569879116 4.49709509514651 1.2766698999777482 1.5735031386801184 0.3562982163971201 0.19834410064303504 0.270072198395908 9.028752859793753 0.06998321832716722 0.06129112593050388 4.3004539468484206e-07 6.36648569879116 0.2968332387023702 KDRHDT(ph)PDPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 KDRHDTPDPSPR 12 2 Q9BRD0;Q9BRD0-2 Q9BRD0 BUD13 BUD13 homolog 2 KDRHDT(1)PDPS(1)PR;KDRHDT(1)PDPS(1)PR;KDRHDT(1)PDPS(1)PR;KDRHDT(1)PDPS(1)PR;KDRHDT(1)PDPS(1)PR 122.93 0.00030424 1544893000.0 2296500.0 2431300.0 2507630.0 1786930.0 1879580.0 1813110.0 1443050.0 1558960.0 2932010.0 1481180.0 True False 2169108.5670407456 2314496.6985442997 2669275.842149862 1956759.2899399046 2027492.252652703 1801793.7079509958 1588927.5768108123 1553552.3316239992 2399630.893957284 1468057.8975406026 1.4775361180744944 1.5765704489051235 1.8182360836187914 1.3328897267730448 1.3810710436211717 1.227331504411026 1.082333046586718 1.058236418486371 1.6345614828797421 1.0 20.485477435902833 -5.676831943363662 1.7924564562230232 1.2058569818081566 1.613113145309445 0.45227665263751005 0.1905063175951301 0.31709107895611094 2.0958501201947963 0.06498307870459494 0.09204577656391506 2.104592685303072e-06 5.676831943363662 0.40725616350128835 KDRNNTEVER ddPTM_KYSE-520_SHP099_60min_R1 2 KDRNNTEVER 10 2 A0A0A0MTR7;A0A0A0MTC1;Q63HN8;Q63HN8-4 A0A0A0MTR7 RNF213 E3 ubiquitin-protein ligase RNF213 0 ; 52.79 0.044929000000000004 5053400000.0 8454700.0 7133000.0 4484800.0 4853400.0 8120800.0 7763500.0 6165200.0 6108700.0 5680300.0 6437100.0 False True 7985700.936973394 6790319.973148718 4773897.383933717 5314665.676772084 8759860.75896852 7715045.116775892 6788438.582553637 6087510.345481291 4648900.708710256 6380072.301988011 1.2516630782514915 1.064301414112952 0.7482512984133715 0.8330102583815626 1.3730033680400415 1.2092410166530412 1.0640065286467648 0.9541444136274821 0.7286595650744698 1.0 22.6051413427075 -7.442074227954842 3.84507418542058 0.8576062722921126 1.0706541257873683 0.1788883321718029 0.18489726418665065 0.4387032089248917 12.030849609715604 0.12902026739344463 0.054013344344959996 3.613480971241575e-08 7.442074227954842 0.21304785349525568 KDRT(ph)PPPR ddPTM_KYSE-520_SHP099_60min_R1 1 KDRTPPPR 8 2 P62854 P62854 RPS26 40S ribosomal protein S26 1 KDRT(1)PPPR 50.108000000000004 0.056695 539420000.0 495660.0 466400.0 447520.0 444290.0 521440.0 482660.0 434980.0 437000.0 615220.0 502380.0 True False 468164.7517262868 443993.4439193272 476367.85525731684 486515.18801934115 562474.3614122446 479647.5399063639 478952.0233957014 435484.14899656695 503511.5564341188 497929.3040457259 0.9402233367717081 0.8916796828622771 0.9566977709220563 0.977076834133593 1.1296269507379533 0.9632844181075088 0.9618876003162855 0.874590319264631 1.0112109336466772 1.0 18.925581397568006 -5.004580323396644 3.6098256006725027 0.9861784603307798 0.9162155046042598 0.18467875333226447 0.060259295004155375 0.4148062921138165 11.699769175263356 0.017754063577126236 0.0372763473504258 9.895088358443257e-06 5.004580323396644 -0.06996295572652 KDS(ph)DTESSDLFTNLNLGR ddPTM_KYSE-520_SHP099_60min_R1 7 KDSDTESSDLFTNLNLGR 18 1 Q9Y3S2 Q9Y3S2 ZNF330 Zinc finger protein 330 1 KDS(0.891)DT(0.028)ES(0.04)S(0.04)DLFT(0.001)NLNLGR;KDS(0.981)DT(0.019)ESSDLFTNLNLGR;KDS(0.978)DT(0.022)ESSDLFTNLNLGR;KDS(0.888)DT(0.112)ESSDLFTNLNLGR;KDS(0.792)DT(0.208)ESSDLFTNLNLGR;KDS(0.919)DT(0.081)ESSDLFTNLNLGR;KDS(1)DTESSDLFTNLNLGR 348.92 9.979499999999998e-60 20606015000.0 5072420.0 4425250.0 4173830.0 4726350.0 4370140.0 4524720.0 4949340.0 5194310.0 5118990.0 4495770.0 True False 4791042.750981426 4212654.347564327 4442881.760164122 5175540.8829710595 4714045.155304737 4496479.544120337 5449667.588103552 5176292.150971062 4189510.4552366496 4455940.975456138 1.0752033694725915 0.9454017391092333 0.9970692575678296 1.161492244057667 1.057923608340027 1.0090976448941964 1.2230116193461673 1.1616608432388815 0.9402077986025802 1.0 22.08729869181794 -5.221252949110213 23.883312495035675 1.0879947988182057 0.9998423986078986 0.12438964619936399 0.08626817305803516 552.5393474784543 328379.49823086854 0.023380780502734157 0.04049585779093592 6.008236936941336e-06 5.221252949110213 -0.08815240021030712 KDS(ph)EGYSESPDLEFEYADTDK ddPTM_KYSE-520_SHP099_60min_R1 1 KDSEGYSESPDLEFEYADTDK 21 1 Q5VSL9;Q5VSL9-4 Q5VSL9 STRIP1 Striatin-interacting protein 1 1 KDS(0.774)EGY(0.055)S(0.151)ES(0.02)PDLEFEYADTDK 121.3 5.4333e-05 845660000.0 464950.0 431900.0 303600.0 455160.0 426560.0 465570.0 473450.0 520080.0 547830.0 478100.0 True False 439158.2966451536 411150.87570488366 323170.5417771749 498418.2695511554 460127.8452055973 462664.2049355768 521310.9464267209 518275.963867585 448357.88167046505 473864.4059561714 0.9267594086519597 0.8676551151278321 0.6819894841543882 1.0518162227134127 0.97101162151469 0.9763641225637224 1.1001268292662985 1.093722080310715 0.9461733695016851 1.0 18.854114772294682 -5.286387168799456 24.99044414993819 1.023286154870457 0.8296866945968162 0.5868795916969127 0.07468721480474005 520.4744963202721 521363.1887116413 0.02156121835846631 0.03199558081501789 5.171455967222793e-06 5.286387168799456 -0.19359946027364083 KDS(ph)FQENEDGYR ddPTM_KYSE-520_SHP099_60min_R1 3 KDSFQENEDGYR 12 1 Q5VYS8-4;Q5VYS8-6;Q5VYS8;Q5VYS8-5;Q5VYS8-3;Q5VYS8-2 Q5VYS8-4 ZCCHC6 Terminal uridylyltransferase 7 1 KDS(1)FQENEDGYR;KDS(1)FQENEDGYR;KDS(1)FQENEDGYR 174.68 1.5659000000000001e-06 1039760000.0 1222090.0 1063040.0 1007940.0 998320.0 1034440.0 1286720.0 1085250.0 1225910.0 1362430.0 1140400.0 True False 1154298.231523982 1011969.9627444294 1072913.425161022 1093200.0326441485 1115844.5428415185 1278689.1031954517 1194957.6610193222 1221657.6043395451 1115047.0560653706 1130296.9432177744 1.0212344981115138 0.8953133677098276 0.9492314666503558 0.9671795002222894 0.9872136251779005 1.131285996010242 1.0572068412548912 1.0808289022366826 0.9865080700749399 1.0 20.10827040588494 -6.043860228551627 7.294891998290391 1.0571298804411626 0.9558758440995156 0.46435260830671166 0.04736037624329098 0.20453367606165904 29.22037269064641 0.01523910856321496 0.015458738386817043 9.03940347145375e-07 6.043860228551627 -0.10125403634164698 KDS(ph)ISEDEMVLR ddPTM_KYSE-520_SHP099_60min_R1 7 KDSISEDEMVLR 12 1 Q8N5D0-5;Q8N5D0-3;Q8N5D0-6;Q8N5D0-2;Q8N5D0-4;Q8N5D0 Q8N5D0-5 WDTC1 WD and tetratricopeptide repeats protein 1 1 KDS(0.952)IS(0.048)EDEMVLR;KDS(0.886)IS(0.114)EDEMVLR;KDS(0.999)IS(0.001)EDEMVLR;KDS(0.965)IS(0.035)EDEMVLR;KDS(0.999)IS(0.001)EDEMVLR;KDS(0.999)IS(0.001)EDEMVLR;KDS(0.972)IS(0.028)EDEMVLR 163.41 2.1469e-06 1867080000.0 2753378.0 2364723.0 2280093.0 2210215.0 2434385.0 2348552.0 2222967.0 2390689.0 2957580.0 2188267.0 True False 2600642.6336170346 2251118.1575584137 2427071.4430577895 2420273.169074628 2625957.249744064 2333893.8158168704 2447686.1984272236 2382396.2578500044 2420558.026524529 2168880.656825964 1.1990713391408683 1.0379170243755136 1.1190433348276865 1.1159088728360753 1.210743081450598 1.076082175601305 1.1285481249158615 1.0984450667454007 1.1160402112981544 1.0 21.048519239880573 -9.374950095970926 0.5698981966481325 0.9853093528040658 1.1248017112424415 0.37257124501797223 0.048285644400484475 9.156373567741507 2.678084123334602 0.3309932178350792 0.020273999752402457 4.2174496262982973e-10 9.374950095970926 0.1394923584383757 KDS(ph)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR ddPTM_KYSE-520_SHP099_60min_R1 12 KDSLDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR 41 1 H0YLG5;Q96TC7;H0YMB1;Q96TC7-2 H0YLG5 RMDN3 Regulator of microtubule dynamics protein 3 1 KDS(1)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR;KDS(0.985)LDLEEEAAS(0.012)GAS(0.001)S(0.001)ALEAGGS(0.001)SGLEDVLPLLQQADELHR;KDS(1)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR;KDS(1)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR;KDS(1)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR;KDS(1)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR;KDS(1)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR;KDS(1)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR;KDS(1)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR;KDS(1)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR;KDS(0.987)LDLEEEAAS(0.011)GAS(0.001)S(0.001)ALEAGGSSGLEDVLPLLQQADELHR;KDS(1)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHR 359.82 8.883099999999998e-98 4248749000.0 204218.3 250036.69999999998 192490.0 231287.7 216301.30000000002 217106.6 192785.1 268170.0 345546.7 184110.69999999998 True False 192889.9037999121 238024.5616192615 204898.21339488943 253269.21346881706 233322.9817239531 215751.5571777956 212273.69930926195 267239.78086134826 282804.12980344205 182479.62243395697 1.057049007593836 1.3043898186791096 1.1228553120721532 1.3879314856675586 1.2786248601999237 1.1823323300434843 1.163273446524628 1.4644910883573736 1.5497847158566678 1.0 17.47737584114239 -3.1288824305503655 0.823765446617557 1.2943709661100673 3.480801948450223e-21 0.1277995457898503 0.15812310136791694 28.82801393888475 3.629588150031844 0.05639487576255339 52.301586965118915 0.0007432203105574118 3.1288824305503655 -1.2943709661100673 KDS(ph)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHRGDEQGKR ddPTM_KYSE-520_SHP099_60min_R1 2 KDSLDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHRGDEQGKR 48 3 H0YLG5;Q96TC7;H0YMB1;Q96TC7-2 H0YLG5 RMDN3 Regulator of microtubule dynamics protein 3 1 KDS(0.965)LDLEEEAAS(0.022)GAS(0.007)S(0.007)ALEAGGSSGLEDVLPLLQQADELHRGDEQGKR;KDS(1)LDLEEEAASGASSALEAGGSSGLEDVLPLLQQADELHRGDEQGKR 199.25 5.1427e-18 383523000.0 101815.3 168190.0 145189.5 130151.0 106363.7 83572.6 74091.6 90835.7 238795.0 77572.3 True False 96167.40234523127 160109.899941663 154548.64748141382 142520.5119086751 114733.91806333141 83050.99240371805 81581.50199233301 90520.61215791172 195435.84753207877 76885.06977233611 1.2507942391155 2.082457626893796 2.010125606168361 1.8536825463082975 1.4922782590048924 1.0801966187926968 1.0610837999354554 1.177349678239894 2.5419219636632002 1.0 16.230415849561435 -5.859272078935829 4.288919005270574 1.3570944179532503 1.8346657434272562 0.15624373970168282 0.4652213950375729 0.3864793072005132 12.799023656957669 0.14829709832616475 0.1715736228145869 1.3826998669814554e-06 5.859272078935829 0.47757132547400594 KDS(ph)LESDSSTAIIPHELIR ddPTM_KYSE-520_SHP099_60min_R1 10 KDSLESDSSTAIIPHELIR 19 1 Q9UMX1;Q9UMX1-2;Q9UMX1-3 Q9UMX1 SUFU Suppressor of fused homolog 1 KDS(0.996)LES(0.004)DSSTAIIPHELIR;KDS(1)LESDSSTAIIPHELIR;KDS(0.966)LES(0.033)DS(0.001)STAIIPHELIR;KDS(0.994)LES(0.006)DSSTAIIPHELIR;KDS(0.861)LES(0.138)DSSTAIIPHELIR;KDS(0.791)LES(0.203)DS(0.004)S(0.002)TAIIPHELIR;KDS(1)LESDSSTAIIPHELIR;KDS(0.915)LES(0.081)DS(0.004)STAIIPHELIR;KDS(0.997)LES(0.003)DSSTAIIPHELIR;KDS(0.917)LES(0.035)DS(0.046)S(0.003)TAIIPHELIR 233.43 3.5906e-26 27728550000.0 13795210.0 13970900.0 12527840.0 13718010.0 12714190.0 12700610.0 12314210.0 12509900.0 15112110.0 12189860.0 True False 13029962.201230645 13299716.993251571 13335404.611652737 15021765.545929905 13714724.419154538 12621340.781937942 13559050.521908116 12466506.076732608 12368131.769291645 12081867.323967582 1.0784725449999162 1.100799788362852 1.1037536048089547 1.2433314439838499 1.1351493979699439 1.0446514966192495 1.1222644776946151 1.031836035146818 1.0236937252866685 1.0 23.526340113148688 -7.253790420390723 1.0265121617411648 1.0010324727778654 1.1289559321101195 0.4755521506656286 0.04854703997465652 0.509719257583839 0.9539745375577436 0.04588262442825342 0.018461052613059085 5.5745469766888603e-08 7.253790420390723 0.12792345933225402 KDS(ph)LPDADLASCGSLSQSSASFFTPR ddPTM_KYSE-520_SHP099_60min_R1 6 KDSLPDADLASCGSLSQSSASFFTPR 26 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KDS(1)LPDADLASCGSLSQSSASFFTPR;KDS(1)LPDADLASCGSLSQSSASFFTPR;KDS(1)LPDADLASCGSLSQSSASFFTPR;KDS(1)LPDADLASCGSLSQSSASFFTPR;KDS(0.999)LPDADLAS(0.001)CGSLSQSSASFFTPR;KDS(1)LPDADLASCGSLSQSSASFFTPR 203.38 4.7118e-16 8669650000.0 2743200.0 2535760.0 2377320.0 1912620.0 2253376.0 2350690.0 2311140.0 2574390.0 3654990.0 2618590.0 True False 2591029.2275663777 2413938.283346643 2530565.851046491 2094394.8297498296 2430703.8712443933 2336018.4717658185 2544772.5857527745 2565460.041957141 2991335.9507999443 2595391.3298321906 0.9983192891893898 0.930086440376111 0.9750228499106949 0.8069668745812009 0.9365461937493467 0.9000640654513005 0.9804966813683973 0.98846752413364 1.152556809609653 1.0 21.307520652047433 -7.326801847166247 2.0913027481867474 1.0713994275261762 0.9241599185156583 0.45306554104966257 0.06169349409133122 0.29006707029247136 2.359092199532712 0.04478909030435038 0.017357239494789206 4.711922653139942e-08 7.326801847166247 -0.14723950901051797 KDS(ph)LPVCPVDASGCFTTEVTDFAGQYVK ddPTM_KYSE-520_SHP099_60min_R1 1 KDSLPVCPVDASGCFTTEVTDFAGQYVK 28 1 A0A0A0MSX9;P41252;J3KR24 A0A0A0MSX9 IARS Isoleucine--tRNA ligase, cytoplasmic 1 KDS(0.956)LPVCPVDAS(0.016)GCFT(0.021)T(0.005)EVT(0.002)DFAGQYVK 49.662 0.048332 17078000.0 67810.0 66938.0 68531.0 67215.0 75757.0 75712.0 64045.0 76537.0 96400.0 80136.0 True False 64048.44412411639 63722.19800401364 72948.61791347689 73603.09339107329 81718.6449016328 75239.45332405953 70519.29361896579 76271.51101087009 78896.19004624207 79426.05738486463 0.8063908273045088 0.802283282112861 0.9184469217702593 0.9266869817599562 1.0288644255078565 0.947289287689069 0.8878609355775967 0.9602832309967375 0.9933287971722549 1.0 16.277324770956536 -4.875243136743446 2.1963387330897937 0.9609339320593873 0.7960400446939069 0.734035637732479 0.037661507351894004 0.16894456506939903 1.6019952354184466 0.011147233440909529 0.03344647537248017 1.3327750784094502e-05 4.875243136743446 -0.16489388736548038 KDS(ph)LSQLEEYLR ddPTM_KYSE-520_SHP099_60min_R1 5 KDSLSQLEEYLR 12 1 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 KDS(0.998)LS(0.002)QLEEYLR;KDS(1)LSQLEEYLR;KDS(0.998)LS(0.002)QLEEYLR;KDS(1)LSQLEEYLR;KDS(0.934)LS(0.066)QLEEYLR 245.97 1.0912e-15 817246000.0 1574936.0 1409456.0 1201967.0 1117570.0 1027046.0 1211026.0 1204769.0 1258274.0 1493113.0 1429833.0 True False 1487571.1605229224 1341743.6181234128 1279447.7160351987 1223783.5167903278 1107868.6771076252 1203467.5375267137 1326558.8079323547 1253909.3411773588 1222001.317515713 1417165.7920132414 1.0496804035960128 0.9467795692537264 0.9028214787894372 0.8635429416143382 0.7817495196054476 0.8492073011563837 0.936064654826187 0.8848007397892672 0.8622853616722743 1.0 20.434577116093656 -4.366795409504467 1.659388808839867 0.8753081962115087 1.0888487681898016 0.4649940788638691 0.05417352468489816 0.6722440359532573 2.1368486665867814 0.015339496070649812 0.21554865942452658 4.297388234718673e-05 4.366795409504467 0.2135405719782929 KDS(ph)LSVNEFK ddPTM_KYSE-520_SHP099_60min_R1 4 KDSLSVNEFK 10 1 Q99584 Q99584 S100A13 Protein S100-A13 1 KDS(0.998)LS(0.002)VNEFK;KDS(0.987)LS(0.013)VNEFK;KDS(0.971)LS(0.029)VNEFK;KDS(0.957)LS(0.043)VNEFK 171.76 2.6503e-05 2213195000.0 2293160.0 2158700.0 1798340.0 1691310.0 1909910.0 1973130.0 1884044.0 1936290.0 2406870.0 2112470.0 True False 2165953.843498872 2054992.8117252402 1914263.8738457344 1852051.593889105 2060209.05109861 1960814.9637745917 2074501.5540175007 1929573.4619234835 1969843.080255174 2093755.1592767907 1.0344828686879606 0.981486685594633 0.9142730301411867 0.8845597756180942 0.9839780176638381 0.9365063317393242 0.9908042708938611 0.9215850541903775 0.9408182573437014 1.0 20.99766131476887 -4.44184823118484 3.5167449500418577 0.9441409219344402 1.0323548007630383 0.3762698539170485 0.0346938035381716 0.2554389232410655 5.547831315850787 0.008837819877101643 0.044413309638003384 3.615361832219141e-05 4.44184823118484 0.0882138788285981 KDS(ph)LTQAQEQGNLLN ddPTM_KYSE-520_SHP099_60min_R1 9 KDSLTQAQEQGNLLN 15 1 Q5JTD0-4;Q5JTD0-2;Q5JTD0 Q5JTD0-4 TJAP1 Tight junction-associated protein 1 1 KDS(1)LTQAQEQGNLLN;KDS(0.997)LT(0.003)QAQEQGNLLN;KDS(1)LTQAQEQGNLLN;KDS(0.997)LT(0.003)QAQEQGNLLN;KDS(1)LTQAQEQGNLLN;KDS(0.942)LT(0.058)QAQEQGNLLN;KDS(0.945)LT(0.055)QAQEQGNLLN;KDS(1)LTQAQEQGNLLN;KDS(0.749)LT(0.251)QAQEQGNLLN 170.48 3.2812e-08 26965530000.0 24857300.0 26560200.0 19652000.0 16220980.0 17324500.0 24265200.0 19221500.0 24249700.0 26428400.0 24775000.0 True False 23478416.01720096 25284208.124327015 20918799.36431176 17762617.06218455 18687839.5870789 24113751.886081073 21164596.80376222 24165583.45062256 21629668.765747957 24555512.774658334 0.9561362547244807 1.0296754279316336 0.8518982908758591 0.7233657559990294 0.761044567001062 0.9820097062264094 0.8619081587904941 0.9841204976001077 0.8808477739495674 1.0 24.549543613795564 -9.15830189319515 9.580133854814534 0.9999999999258848 0.8907953443138069 0.10590157124543398 0.09375558219131494 0.0 0.0 0.0991632714328282 0.024050626017608535 6.945413499023339e-10 9.15830189319515 -0.10920465561207793 KDS(ph)SSEVFSDAAK ddPTM_KYSE-520_SHP099_60min_R1 5 KDSSSEVFSDAAK 13 1 Q5T5U3;E7ESW5;Q5T5U3-3;A0A1B0GV73;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 KDS(0.979)S(0.01)S(0.01)EVFSDAAK;KDS(0.937)S(0.032)S(0.032)EVFSDAAK;KDS(0.868)S(0.085)S(0.047)EVFSDAAK;KDS(0.5)S(0.361)S(0.138)EVFSDAAK;KDS(0.333)S(0.333)S(0.333)EVFSDAAK 228.99 6.0508e-12 3358290000.0 2976540.0 2890140.0 2777730.0 2657220.0 2907030.0 3256970.0 3348560.0 3883600.0 4738470.0 3483790.0 True False 2811425.3926146203 2751293.336211415 2956786.9203251433 2909761.389877675 3135796.72226188 3236642.04211832 3687065.1235962845 3870128.69803905 3878083.2951080566 3452926.330947608 0.8142152838352225 0.7968004737177119 0.8563133519022091 0.8426943151952886 0.9081562772297269 0.9373620320564637 1.0678088004803798 1.1208257365215628 1.1231294627834616 1.0 21.71938812358199 -6.452637150741541 1.2492184160464403 1.0980803174647504 0.8250753438365994 0.8877180735236653 0.039582194647887196 0.13172475690671828 0.4194210717664314 0.021215199637574216 0.016153703093931923 3.526653968570813e-07 6.452637150741541 -0.273004973628151 KDS(ph)SSVVEWTQAPK ddPTM_KYSE-520_SHP099_60min_R1 6 KDSSSVVEWTQAPK 14 1 Q8TC07-2;Q8TC07-3;F8WCB5;Q8TC07 Q8TC07-2 TBC1D15 TBC1 domain family member 15 1 KDS(0.924)S(0.038)S(0.038)VVEWTQAPK;KDS(0.832)S(0.084)S(0.084)VVEWTQAPK;KDS(0.908)S(0.076)S(0.016)VVEWTQAPK;KDS(0.525)S(0.174)S(0.301)VVEWTQAPK;KDS(0.422)S(0.202)S(0.376)VVEWTQAPK;KDS(0.333)S(0.333)S(0.333)VVEWTQAPK 288.41 1.0370999999999999e-32 3832400000.0 3979420.0 3679600.0 3264510.0 2421389.0 2470569.0 3021090.0 2693582.0 2618299.0 3123840.0 3251780.0 True False 3758673.6398228975 3502826.492807802 3474945.5380006814 2651517.0825428506 2664988.7246852694 3002234.256693568 2965875.5553870085 2609216.731884582 2556629.40159806 3222971.7590465588 1.1662136440608508 1.0868312708529695 1.0781805730214227 0.8226932411369439 0.8268731232921644 0.9315111894066702 0.920230078672608 0.809568599092056 0.7932521885808826 1.0 21.61996011631239 -5.179351777645086 4.680764982685184 0.8668110166049485 1.1155301202634416 0.7451955100265504 0.06402367691952365 0.11009597242654812 4.315868432841081 0.01788800645696112 0.03180227020453961 6.616803268639986e-06 5.179351777645086 0.24871910365849303 KDSDT(ph)ESSDLFTNLNLGR ddPTM_KYSE-520_SHP099_60min_R1 1 KDSDTESSDLFTNLNLGR 18 1 Q9Y3S2 Q9Y3S2 ZNF330 Zinc finger protein 330 1 KDS(0.101)DT(0.271)ES(0.271)S(0.271)DLFT(0.087)NLNLGR 71.176 0.016531999999999998 43593000.0 323660.0 260790.0 237160.0 288980.0 255490.0 274860.0 310240.0 294790.0 312500.0 285480.0 True False 305705.93459978636 248261.25694622967 252447.71306941664 316444.57231499517 275595.6094607516 273144.49678586 341602.08685061993 293767.442294503 255757.87748392776 282950.8693000792 1.0804205527128974 0.8774005803917146 0.8921962802018718 1.118372857796011 0.9740051696694839 0.9653424902405258 1.2072841044652847 1.0382277425801172 0.9038950052232838 1.0 18.110192044205917 -5.247652733561178 24.968264163436682 1.0335934039007524 0.9427452857558928 0.12731430352927164 0.09450727397504113 1507.6920760863836 2730498.3554420513 0.02597372744613922 0.04468665323485052 5.6538888501550945e-06 5.247652733561178 -0.0908481181448596 KDSETGENIR ddPTM_KYSE-520_SHP099_60min_R1 2 KDSETGENIR 10 1 P38646 P38646 HSPA9 Stress-70 protein, mitochondrial 0 ; 119.39 0.0013042 2258600000.0 1630330.0 1576990.0 1021360.0 1045290.0 1677050.0 1639280.0 1191690.0 1328920.0 1613150.0 1397760.0 False True 1539892.3449177204 1501229.0332897499 1087198.4998337796 1144634.0473221017 1809024.2938907694 1629048.645459961 1312157.6549736166 1324310.2866922605 1320242.6242022358 1385376.9338408257 1.1115331194727744 1.083624966331535 0.7847672884372524 0.8262257147220669 1.3057993457963977 1.1758883850791269 0.9471484784547296 0.9559205544304367 0.9529844130882047 1.0 20.40184712797948 KDSLES(ph)DSSTAIIPHELIR ddPTM_KYSE-520_SHP099_60min_R1 1 KDSLESDSSTAIIPHELIR 19 1 Q9UMX1;Q9UMX1-2;Q9UMX1-3 Q9UMX1 SUFU Suppressor of fused homolog 1 KDS(0.449)LES(0.54)DS(0.004)S(0.007)TAIIPHELIR 202.15 1.7364e-13 2154700000.0 3714600.0 3532300.0 2990800.0 3232400.0 3097900.0 3306700.0 2993400.0 3158300.0 3828800.0 3127100.0 True False 3508543.733128484 3362603.005909604 3183591.7534491955 3539606.3241435 3341687.10536014 3286061.6587419123 3296002.084768711 3147344.59445276 3133586.436193485 3099396.3268469824 1.1320087407787978 1.0849219174659028 1.0271651049828356 1.1420308830733963 1.0781735386386162 1.0602263512665464 1.0634335648586561 1.0154701956605066 1.0110312156758874 1.0 21.5635558167355 -7.0943254280000385 1.0222301195373227 0.9990456391607684 1.091569916917875 0.5910834055350512 0.029936023791518808 0.4057906795034009 0.7701162326650369 0.025481809721975883 0.011224405719403899 8.047751765147524e-08 7.0943254280000385 0.09252427775710659 KDSS(ph)SEVFSDAAK ddPTM_KYSE-520_SHP099_60min_R1 1 KDSSSEVFSDAAK 13 1 Q5T5U3;E7ESW5;Q5T5U3-3;A0A1B0GV73;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 KDS(0.178)S(0.516)S(0.305)EVFS(0.001)DAAK 173.31 5.3191e-07 1357000000.0 1076500.0 1152900.0 1109300.0 956630.0 1167200.0 1336300.0 1323300.0 1621700.0 1970400.0 1494800.0 True False 1016784.399050454 1097512.9534618196 1180807.252942756 1047547.8275787034 1259051.9995404473 1327959.6560246819 1457072.0781634387 1616074.701207627 1612625.0297418619 1481557.2349368013 0.686294376669037 0.7407833646795536 0.7970041420594364 0.7070586291749901 0.8498166455203836 0.8963269354095041 0.9834733642440705 1.090794647077245 1.0884662378977559 1.0 20.498682930327732 -6.46671302800268 1.0966013715478116 1.0709787485966018 0.7326474360101926 0.914578998286771 0.042122900274765986 0.12887426083946701 0.31911621033896415 0.02489190496066218 0.01854504436676571 3.4141843870508515e-07 6.46671302800268 -0.33833131258640925 KDSS(ph)SVVEWTQAPK ddPTM_KYSE-520_SHP099_60min_R1 1 KDSSSVVEWTQAPK 14 1 Q8TC07-2;Q8TC07-3;F8WCB5;Q8TC07 Q8TC07-2 TBC1D15 TBC1 domain family member 15 1 KDS(0.087)S(0.826)S(0.087)VVEWTQAPK 244.57 1.5653e-18 1953100000.0 1022400.0 905610.0 776700.0 671680.0 629300.0 776320.0 732690.0 666300.0 779580.0 772570.0 True False 965685.4338961302 862103.1362516773 826767.3247639397 735516.2652520441 678822.3297727924 771474.6989187169 806757.4555653051 663988.7608155886 638027.923612546 765725.6308503656 1.2611376647059627 1.125864280256991 1.0797174489846777 0.9605480548368572 0.8865085644566135 1.0075080000416947 1.0535855443017783 0.8671366532137699 0.8332330771062125 1.0 19.54646802335114 -4.550554449500792 0.9633515637680754 0.9375188484162108 1.3433316548533345 0.7146697900241273 0.06599711828666624 0.7756985143948663 0.7924715535782948 0.02493053307195823 0.2985410788417879 2.8147870901794356e-05 4.550554449500792 0.4058128064371237 KDSSS(ph)EVFSDAAK ddPTM_KYSE-520_SHP099_60min_R1 1 KDSSSEVFSDAAK 13 1 Q5T5U3;E7ESW5;Q5T5U3-3;A0A1B0GV73;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 KDS(0.014)S(0.095)S(0.892)EVFSDAAK 231.21 1.9634e-12 587880000.0 681370.0 572360.0 588990.0 659540.0 682010.0 809390.0 767410.0 899800.0 1066800.0 813070.0 True False 643573.0478225795 544862.9664701243 626957.23781732 722222.4833020684 735680.3068939187 804338.2967820248 844987.2919998508 896678.8038148978 873096.0118395335 805866.8323588874 0.798609673435435 0.6761203521371298 0.7779911179395814 0.8962057430605749 0.9129055538127525 0.9981032404914986 1.0485445709763885 1.1126885582202095 1.0834246761141126 1.0 19.62018193084727 -5.787801803481783 0.9012307809619732 1.0747481271967274 0.7237516091478102 0.8917736330200948 0.04495842647024114 0.17198776239153943 0.3026035616102534 0.02272917555728242 0.035686300933040774 1.6300397549531599e-06 5.787801803481783 -0.3509965180489172 KDT(ph)PTKKPVK ddPTM_KYSE-520_SHP099_60min_R1 2 KDTPTKKPVK 10 3 A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5;K7ENP8 A0A0A0MRE1 EXOC7 Exocyst complex component 7 1 KDT(0.975)PT(0.025)KKPVK;KDT(0.998)PT(0.002)KKPVK 80.96 0.0062840000000000005 1832800000.0 2420100.0 1577600.0 387050.0 6651300.0 1912610.0 2189900.0 1716900.0 4790300.0 1156200.0 1250320.0 True False 2285852.228650254 1501809.7279741222 411999.86230189627 7283437.552213744 2063121.5257377096 2176232.021797842 1890461.0073292588 4773683.567364425 946263.2254301363 1239243.137534242 1.844555083192537 1.2118765740856283 0.33246087859858103 5.877327323115795 1.6648238454987634 1.7560976985742718 1.5254964502694477 3.852096027630835 0.7635815739217598 1.0 20.241027839048105 KDTDFEHR ddPTM_KYSE-520_SHP099_60min_R1 1 KDTDFEHR 8 1 P17858;P17858-2 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type 0 111.61 0.0021523000000000002 308080000.0 1011600.0 1012000.0 670960.0 621420.0 1025600.0 1018500.0 791980.0 867900.0 946170.0 699810.0 False True 955484.531425396 963382.0009570314 714211.1551739579 680479.569963264 1106308.8851342383 1012143.1637066082 872041.0673799436 864889.4574693824 774369.3790046974 693610.2278439422 1.3775525404166529 1.3889385742647757 1.0297010143493022 0.9810691115073458 1.5950008242715108 1.4592390986690205 1.2572494354511552 1.2469387312206373 1.1164330454177291 1.0 19.403765646858933 -7.877346367008344 1.8844155187234297 1.0017780009640247 1.2960423219676993 0.24178800033587633 0.17402191657790836 0.5216620404533059 3.950830501063454 0.18079063824967287 0.05188033946088931 1.3263362302493942e-08 7.877346367008344 0.2942643210036746 KDTFFK ddPTM_KYSE-520_SHP099_60min_R1 1 KDTFFK 6 1 J3KRJ8;J3QRA8;J3QRH4;J3QKT2;Q96KP4-2;Q96KP4 J3KRJ8 CNDP2 Cytosolic non-specific dipeptidase 0 91.065 0.036937 830690000.0 1050200.0 865740.0 589390.0 496560.0 947170.0 845880.0 612410.0 751640.0 703650.0 735550.0 False True 991943.3124782025 824148.5508977663 627383.0224573424 543752.9131037922 1021706.8903398968 840600.5491567457 674318.3793456297 749032.7362740949 575884.8975730102 729033.599249241 1.3606277042645305 1.1304671715356807 0.860568049405983 0.7458543936297987 1.4014537757821464 1.153034030286665 0.9249482877607329 1.0274323941248373 0.7899291584997683 1.0 19.475625780557245 -4.397247248379544 3.457570394314025 0.9983923441353693 1.3628742040558086 0.287681295979217 0.17916780468278262 0.3592193810572479 7.003180784111513 0.048135479036566085 0.26922655652434246 4.006385649737187e-05 4.397247248379544 0.36448185992043935 KDVGRPQPGR ddPTM_KYSE-520_SHP099_60min_R1 2 KDVGRPQPGR 10 2 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 ; 60.06399999999999 0.034026 2380000000.0 807410.0 720310.0 567160.0 516310.0 501310.0 659560.0 481180.0 784840.0 626950.0 493020.0 False True 762621.3577680681 685705.2263926471 603720.0410880856 565379.9471657377 540760.2449362765 655443.4413886406 529822.3702642507 782117.5732230329 513111.6841233549 488652.2263637555 1.5606628121660668 1.4032581648000193 1.2354799763844175 1.1570190754536043 1.1066362041574562 1.3413290803278255 1.084252443106333 1.600560748577906 1.050054939770993 1.0 18.898448539207315 -4.548884744005898 2.2805483243662508 1.2129086974641465 1.5660803557848233 0.3419229150053872 0.16434733479097036 0.42201678160624806 3.7828426418769703 0.04234548081563076 0.23358991945455115 2.8256297600730194e-05 4.548884744005898 0.35317165832067676 KDVHMPK ddPTM_KYSE-520_SHP099_60min_R1 2 KDVHMPK 7 1 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;A0A2R8Y6L3;Q9NQ39 P46783 RPS10;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 0 ; 85.064 0.017345 5851500000.0 18799300.0 17114600.0 10951900.0 9673700.0 14370600.0 14754300.0 10857000.0 13744100.0 12388900.0 11408400.0 False True 17756465.353524536 16292388.92646167 11657876.997659571 10593085.539496051 15501484.46247084 14662212.940870294 11954531.514108995 13696424.92499706 10139388.058754023 11307330.451600904 1.570349909691598 1.440869619597522 1.0310017070394397 0.9368334625788062 1.370923449068929 1.2966997828204803 1.0572372997568547 1.21128722501056 0.8967092721092694 1.0 23.430755027771536 -4.645586413455329 4.684840313254163 1.1176168570257328 1.5393766011669086 0.554207054461183 0.14635938035511414 0.15532002435366882 5.5081418621398 0.039035289671861255 0.11121464832525546 2.261588496932489e-05 4.645586413455329 0.4217597441411758 KDVLT(ph)PSEAYEELLNQR ddPTM_KYSE-520_SHP099_60min_R1 1 KDVLTPSEAYEELLNQR 17 1 Q1MSJ5-1;Q1MSJ5;F2Z2M5 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 KDVLT(0.99)PS(0.01)EAYEELLNQR 97.69 0.0019760999999999997 41035000.0 71281.0 74917.0 60036.0 47732.0 52550.0 62229.0 49497.0 64493.0 68835.0 61487.0 True False 67326.90083484941 71317.87486729039 63906.016620996365 52268.43492885094 56685.38603140038 61840.605728324495 54500.63980416812 64269.288835779385 56336.29918913977 60942.273016162166 1.104765173707814 1.1702529514837192 1.048631983320481 0.8576712410281959 0.9301488642599065 1.0147407155608406 0.894299426437775 1.0545929066140163 0.9244207083349045 1.0 15.895155690010169 -5.002161177967214 5.678319765095496 0.9545667458978084 1.132937531485215 0.6290069145021246 0.05699032453347484 0.09433168290493345 11.245435467114179 0.014945464678729085 0.02945341164300358 9.950360650782618e-06 5.002161177967214 0.1783707855874066 KDWDDDQND ddPTM_KYSE-520_SHP099_60min_R1 1 KDWDDDQND 9 1 P50990-2;P50990;P50990-3;H7C2U0 P50990-2 CCT8 T-complex protein 1 subunit theta 0 104.06 0.005635800000000001 2040700000.0 8115900.0 8547100.0 10530000.0 5995500.0 8234500.0 9288900.0 6814200.0 7907400.0 11509000.0 8678400.0 False True 7665694.848354451 8136484.486541354 11208780.648595694 6565310.517387196 8882508.302104026 9230924.52955749 7503045.836183249 7879971.075001027 9419255.71828008 8601516.127693037 0.8912027524629456 0.9459360844939314 1.3031168554702155 0.7632736391959821 1.032667749526891 1.0731741233197296 0.8722934102311098 0.9161142010338205 1.0950692387769045 1.0 23.036159545083333 -6.739905204176692 24.996660106649205 0.9638785984099557 1.0033230462178295 0.01021674370282466 0.14081534050777927 1454.5664664543165 1688446.5701577913 0.05362124291932449 0.04149593738711418 1.8200980979853086e-07 6.739905204176692 0.03944444780787382 KDWLFAPHYR ddPTM_KYSE-520_SHP099_60min_R1 2 KDWLFAPHYR 10 1 Q15008-3;Q15008-2;Q15008;Q15008-4 Q15008-3 PSMD6 26S proteasome non-ATPase regulatory subunit 6 0 ; 101.95 0.0037164999999999998 819560000.0 2397600.0 2193000.0 1730760.0 1473750.0 2428000.0 2039400.0 1695200.0 1584100.0 1639890.0 1252890.0 False True 2264600.3485028967 2087644.9882398925 1842327.5589139108 1613814.7569009063 2619069.7865697453 2026671.3481229804 1866567.359557665 1578605.1268317197 1342127.3142627783 1241790.3693336688 1.8236575225801248 1.6811573352433873 1.4836059325395505 1.2995871096720308 2.1091078262872256 1.6320559396917131 1.5031259749254173 1.2712331854198402 1.0808002279667777 1.0 20.243990217400558 -7.376623097766552 1.5933196756773318 1.0202766775521472 1.6644200327754557 0.6223822748227441 0.19847613497301358 0.2877724505123648 1.2956577396039743 0.17518293786192882 0.062454366375070375 4.2012342971952125e-08 7.376623097766552 0.6441433552233085 KDWYDVK ddPTM_KYSE-520_SHP099_60min_R1 3 KDWYDVK 7 1 P61247;H0Y8L7;E9PFI5;H0Y9Y4;D6RG13;D6RI02 P61247 RPS3A 40S ribosomal protein S3a 0 ;; 104.17 0.010403 22939600000.0 17110000.0 16292900.0 10595700.0 10000800.0 15082900.0 15055900.0 12349900.0 13460800.0 13041500.0 11677600.0 False True 16160874.192060607 15510164.627858527 11278715.775719417 10951273.025149837 16269838.42003823 14961930.543397479 13598348.415408945 13414107.626574328 10673492.349461272 11574145.549035331 1.3962909074879886 1.3400699483299008 0.9744750252133699 0.9461841462726889 1.4057053586469086 1.2927028159451917 1.17489004763227 1.1589717417794485 0.9221840441043075 1.0 23.46440235595448 -7.658526313640037 4.198313767398914 0.9615027081898909 1.2107794642407737 0.31024721750439677 0.15058255570977827 0.29795126439379754 9.106742440438925 0.12724472246270604 0.042324935051811466 2.1951979393947083e-08 7.658526313640037 0.24927675605088273 KDYEEIGPSICR ddPTM_KYSE-520_SHP099_60min_R1 2 KDYEEIGPSICR 12 1 P61158;B4DXW1 P61158 ACTR3 Actin-related protein 3 0 ; 117.08 0.00035373 1041960000.0 1235770.0 1082820.0 851830.0 704240.0 1202300.0 1139950.0 824920.0 849610.0 977450.0 874260.0 False True 1167219.3746535785 1030799.7018540442 906740.32477619 771170.7578625238 1296914.1698487657 1132835.1492070185 908310.9640433642 846662.9012104647 799969.7195093288 866514.7365639887 1.3470277254394782 1.1895928117062367 1.0464222782542727 0.8899684279121037 1.4967018045087728 1.3073466629074035 1.0482348720866663 0.9770900199202116 0.9232038253399678 1.0 19.724864759525662 -6.951172061716839 5.385147390209264 0.9709394908568939 1.2020861144860988 0.34087190131303635 0.15624016431689366 0.254866392062928 16.561955710827775 0.07342158364742735 0.048238122018234894 1.1189944648607762e-07 6.951172061716839 0.2311466236292049 KDYFDMFAPK ddPTM_KYSE-520_SHP099_60min_R1 4 KDYFDMFAPK 10 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 0 ;;; 142.1 0.00055532 2118683000.0 7738750.0 6673880.0 4273931.0 4654066.0 7665860.0 7294230.0 5194735.0 5649804.0 5544510.0 5568557.0 False True 7309466.1106843455 6353256.787101895 4549435.43079138 5096387.0333440285 8269119.569223055 7248704.004912764 5719869.5095279515 5630206.148598166 4537766.749722924 5519223.917251793 1.3243648419185672 1.1511141570544206 0.8242889759502088 0.9233883440412562 1.4982395520094296 1.3133556662296348 1.036353950353235 1.0201083038141412 0.8221747872085666 1.0 22.396033986789934 -7.214813244559607 2.563321327483212 0.9261389376589291 1.1577021884521548 0.21737290499233464 0.18997510480094928 0.5331088125546709 6.795324841172795 0.130264500761991 0.06014192148419798 6.097990668404508e-08 7.214813244559607 0.2315632507932257 KDYNEAYNYYTK ddPTM_KYSE-520_SHP099_60min_R1 1 KDYNEAYNYYTK 12 1 Q99615;A0A6I8PU73;A0A6I8PUD4;A0A6I8PS32;K7ELJ8;K7ESP1;K7EK03;A0A6I8PIK4;K7EIH8;A0A6I8PR89;A0A6I8PU89;A0A6I8PLE7 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 0 92.935 0.047661 0.0 258790.0 262210.0 152170.0 180180.0 235620.0 239730.0 200220.0 217730.0 230330.0 201680.0 False True 244434.40281492492 249613.03801476577 161979.12168060854 197304.25302690745 254161.95350558622 238233.7561466716 220460.19155889313 216974.74544856412 188507.87814679396 199893.27210466584 1.2228245615337017 1.2487315625313604 0.8103280314296665 0.9870479929089221 1.2714882838703288 1.1918047748096812 1.102889503171764 1.0854529677965064 0.9430426355124629 1.0 17.608870389918167 -7.655680606420997 4.637839808071254 0.9725493542908012 1.1145565009094491 0.16411278182193179 0.1308096663571682 0.43227475074241145 15.19322956791622 0.10659195615847168 0.03651660808156509 2.2096291651688186e-08 7.655680606420997 0.14200714661864788 KEAESSPFVER ddPTM_KYSE-520_SHP099_60min_R1 4 KEAESSPFVER 11 1 P14625 P14625 HSP90B1 Endoplasmin 0 ;;; 151.66 0.00016111 2661540000.0 2827050.0 2483760.0 1955330.0 1732980.0 2509530.0 2527930.0 2093950.0 2253260.0 2323380.0 2254600.0 False True 2670227.900915544 2364436.4414002304 2081373.7004386187 1897681.8981605642 2707015.733727504 2512152.2511819787 2305626.9009826407 2245443.9669748372 1901512.7596435489 2234625.9980522553 1.1949328000493005 1.0580904560589202 0.9314192631128366 0.8492167816066858 1.2113954353377223 1.124193602585677 1.0317730586649718 1.0048410646488546 0.8509311004619768 1.0 21.091601961848713 -7.553488316952302 5.494652810684806 0.9239307264326369 1.0509636459917169 0.18642622806688858 0.10883185004735005 0.33380274132253845 27.822096151376165 0.07957766595042269 0.0298243825270457 2.7958359379430013e-08 7.553488316952302 0.12703291955908003 KECSEAMEVETSVISIDS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 3 KECSEAMEVETSVISIDSPQK 21 1 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KECSEAMEVETSVISIDS(1)PQK;KECSEAMEVETSVISIDS(1)PQK;KECSEAMEVETSVISIDS(1)PQK 232.83 1.6693e-26 3206000000.0 2110340.0 2154590.0 2080340.0 2058290.0 1848000.0 1793740.0 1675340.0 2281430.0 2590910.0 1763920.0 True False 1993275.233341508 2051080.2622944776 2214442.0450616893 2253909.262752545 1993427.0863183248 1782544.6033059296 1844699.7169427439 2273516.2518197675 2120466.055526029 1748293.0411089929 1.1401265042370219 1.1731901998496876 1.266630932567806 1.2892056478831633 1.1402133620882209 1.0195914308365661 1.0551433161185595 1.300420580738347 1.2128779361730777 1.0 20.737515592561664 -5.928388484156871 10.680555987746269 1.126656350757304 1.2174832260057122 0.20486617163428023 0.092603035680829 0.8814253005602678 126.33640455910364 0.031231203461745093 0.035424948274039456 1.1792652898829949e-06 5.928388484156871 0.09082687524840827 KECWDR ddPTM_KYSE-520_SHP099_60min_R1 3 KECWDR 6 1 Q14764;H3BQK6;I3L155;H0YLN5;H0YM19;H0YN78;H0YLI5;H0YMC0;Q9BV29-3;Q9BV29;Q9BV29-2 Q14764 MVP;C15orf57 Major vault protein;Uncharacterized protein C15orf57 0 ;; 108.09 0.023312 2972580000.0 5535300.0 4908400.0 3026810.0 2895210.0 4759300.0 4786600.0 3489710.0 4045280.0 3891380.0 3980520.0 False True 5228245.874653022 4672593.096341392 3221923.015667232 3170369.887923372 5133829.8332872335 4756725.053900878 3842483.943087531 4031247.867855446 3184803.485706904 3945255.689597699 1.325198234537278 1.1843574824976326 0.8166575931091996 0.803590473561083 1.3012666952926275 1.205682325341485 0.9739505485585783 1.0217963511172368 0.807248943105044 1.0 21.911687372772246 -4.547990651512116 9.064956791241082 1.0030581343841616 1.2905753952308852 0.32611053321579375 0.15661238707524852 0.2737842142527008 91.92465961503942 0.04311341199485456 0.116621831735463 2.8314529441184514e-05 4.547990651512116 0.2875172608467236 KEDELGDR ddPTM_KYSE-520_SHP099_60min_R1 2 KEDELGDR 8 1 Q14116-2;Q14116 Q14116-2 IL18 Interleukin-18 0 ; 117.7 0.002405 3848700000.0 6997100.0 7067500.0 4927400.0 4212200.0 6571600.0 6259400.0 5010100.0 5853100.0 6322300.0 6010200.0 False True 6608956.914626964 6727966.691466228 5245028.08811875 4612526.221555892 7088747.532710772 6220332.762793461 5516569.801864012 5832796.962223814 5174329.692213242 5956954.303864849 1.1094523438494566 1.1294306365756657 0.8804882194103446 0.7743094853964724 1.1899952846896307 1.0442136107637645 0.926072204093438 0.9791575803157526 0.8686200075189694 1.0 22.506143461452417 -4.744729162291506 24.756371182585855 0.9607970493858965 1.119441639161368 0.27046859183821004 0.10606284190806001 307.7901420121139 455986.24840885604 0.028353069722975695 0.07454985066186323 1.7999930892400773e-05 4.744729162291506 0.15864458977547147 KEDEVEEWQHR ddPTM_KYSE-520_SHP099_60min_R1 4 KEDEVEEWQHR 11 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ;;; 221.8 1.3400000000000001e-09 6778510000.0 9494440.0 8655670.0 5837300.0 6264880.0 9692600.0 8926150.0 8068760.0 8937050.0 7599670.0 7326110.0 False True 8967764.4865031 8239838.620774447 6213581.6980102295 6860292.311595136 10455352.47664988 8870438.586862773 8884429.004308948 8906049.45947316 6219761.5000905 7261206.365027336 1.2350240491297948 1.1347754362774438 0.8557230555981915 0.9447868531373587 1.4398919340740317 1.2216205050425362 1.2235472396294442 1.2265247689926562 0.8565741265868959 1.0 22.791777824467985 -2.7892942815625865 14.660339363969454 1.1239477400337656 41.498312082657634 0.0 0.1825247357405238 0.0 0.0 0.04353679190257441 0.0 0.0016244476434614512 2.7892942815625865 40.37436434262387 KEDGTFYEFGEDIPEAPER ddPTM_KYSE-520_SHP099_60min_R1 2 KEDGTFYEFGEDIPEAPER 19 1 O43776 O43776 NARS Asparagine--tRNA ligase, cytoplasmic 0 ; 141.47 6.877e-06 620310000.0 768580.0 637590.0 528800.0 413280.0 677410.0 742660.0 558020.0 519310.0 552110.0 611980.0 False True 725945.3352737555 606959.2193578988 562887.2941099149 452558.0069428368 730718.3130643378 738024.7834642611 614430.1073503834 517508.6348178653 451860.74156048405 606558.3333132352 1.1968269091422525 1.000660919193829 0.9280019137404746 0.7461079703098061 1.2046958601209832 1.2167416436815068 1.0129777691687951 0.8531885663676417 0.7449584264917466 1.0 19.21028687185985 -7.237133965516074 5.157557195515561 0.8479360270883524 1.0400294508405044 0.23201136700299363 0.14745430047159638 0.28316431967362693 22.466573167793417 0.08040761785034442 0.04304680892293684 5.792499893590472e-08 7.237133965516074 0.192093423752152 KEDKPEGQS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 7 KEDKPEGQSPVK 12 2 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 KEDKPEGQS(1)PVK;KEDKPEGQS(1)PVK;KEDKPEGQS(1)PVK;KEDKPEGQS(1)PVK;KEDKPEGQS(1)PVK;KEDKPEGQS(1)PVK;KEDKPEGQS(1)PVK 140.81 2.6300000000000002e-05 11809140000.0 19351790.0 15862897.0 14249031.0 18106107.0 18280835.0 17899691.0 18506204.0 18836818.0 19021422.0 17304921.0 True False 18278307.631863043 15100819.61742616 15167546.337515699 19826905.96548044 19719432.710777078 17787972.38891577 20376991.70346598 18771477.47490439 15567611.255827503 17151612.862964813 1.0656903101708344 0.8804314636807775 0.884321868660336 1.155979097936168 1.1497130251439451 1.0371020224765588 1.1880510518906169 1.094443865126954 0.9076470755378571 1.0 24.031840911746254 -5.257468655953996 24.998004111023626 1.086171599597657 0.9371762366483165 0.30177289657621376 0.09142880158267401 387.29891882322886 2438263.9827815765 0.025152646200308763 0.04160090612657687 5.527533000001462e-06 5.257468655953996 -0.14899536294934057 KEDKT(ph)PIKK ddPTM_KYSE-520_SHP099_60min_R1 2 KEDKTPIKK 9 3 P46821;D6RA40 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KEDKT(1)PIKK;KEDKT(1)PIKK 74.46 0.012284 2312700000.0 2554700.0 2622280.0 1060060.0 1220190.0 3886100.0 4444200.0 1653400.0 1762980.0 1800920.0 4832300.0 True False 2412985.698331811 2496301.7326774746 1128393.1637559696 1336156.4907365 4191913.9611156043 4416462.099307716 1820541.8076289792 1756864.6338626244 1473918.3254987386 4789489.581472517 0.5038085285050238 0.521204126288128 0.2355977906541448 0.2789768028529048 0.8752318780129407 0.9221153996017014 0.3801118629992422 0.3668166730456653 0.307740167386602 1.0 22.19144048467705 -5.731343489220178 24.999898443094313 0.611254925309272 0.38396883357437445 0.20617721923116805 0.24268742633830767 414.39227858900045 344223.4156151994 0.07734318007119352 0.09983646810249637 1.8563356740189053e-06 5.731343489220178 -0.2272860917348975 KEDLEAEEEYSSLCELLGSPEQRPGMQDPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 KEDLEAEEEYSSLCELLGSPEQRPGMQDPLSPK 33 2 A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;Q7Z5J4;A8MXE8;Q7Z5J4-4 A0A1W2PQJ7 RAI1 Retinoic acid-induced protein 1 1 KEDLEAEEEYSSLCELLGSPEQRPGMQDPLS(1)PK;KEDLEAEEEYSSLCELLGSPEQRPGMQDPLS(1)PK;KEDLEAEEEYSSLCELLGSPEQRPGMQDPLS(1)PK;KEDLEAEEEYSSLCELLGSPEQRPGMQDPLS(1)PK;KEDLEAEEEYSSLCELLGSPEQRPGMQDPLS(1)PK;KEDLEAEEEYSSLCELLGSPEQRPGMQDPLS(1)PK;KEDLEAEEEYSSLCELLGSPEQRPGMQDPLS(1)PK;KEDLEAEEEYSSLCELLGSPEQRPGMQDPLS(1)PK 340.82 4.936399999999999e-82 3260946000.0 2186526.0 1842882.0 1795069.0 1779009.0 1749372.0 1753297.0 1713820.0 2164784.0 2605958.0 1766719.0 True False 2065235.0440484823 1754347.1824977235 1910782.0199519517 1948085.4804814425 1887037.6238348824 1742354.0230705019 1887069.6508713553 2157274.8695683856 2132781.718055235 1751067.2441465815 1.1794150401431425 1.0018731081642387 1.0912099614330977 1.1125132327119065 1.0776500046716189 0.9950240511292722 1.077668294681086 1.2319771709394163 1.2179896147247562 1.0 20.73980305625615 -7.167672975972783 8.716990570757991 1.168545062366196 1.0722136208739532 0.14678421898241478 0.07700863748590882 0.47127887400671187 40.0747862672559 0.034819137578826084 0.020067095241078296 6.797152660000694e-08 7.167672975972783 -0.09633144149224271 KEDLVFIFWAPESAPLK ddPTM_KYSE-520_SHP099_60min_R1 6 KEDLVFIFWAPESAPLK 17 1 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;Q9Y281-3;Q9Y281 E9PP50;Q9Y281-3 CFL1;CFL2 Cofilin-1;Cofilin-2 0 ;;;;; 197.09 4.0127e-12 4123115000.0 10866981.0 6178769.0 6378558.0 5924648.0 9449464.0 6448070.0 5458891.0 5619330.0 5549426.0 3697656.0 False True 10264167.901140438 5881931.662718654 6789730.054733648 6487724.764609625 10193083.056704495 6407825.203339882 6010728.975922077 5599837.855791479 4541790.128045199 3664897.64457284 2.800669731210671 1.6049374998040957 1.8526383853552397 1.770233549146172 2.7812735975857095 1.748432241437603 1.6400809951194841 1.5279656893239553 1.2392679328359701 1.0 21.805341475806255 -7.314509403316543 0.9995270519947745 1.0483379753606954 2.0905132208524346 0.5128813053140854 0.386237226303904 0.4780767258330053 0.8512617005158853 0.34858409728794754 0.13763052379130025 4.8471961739237115e-08 7.314509403316543 1.0421752454917392 KEDLYLKPIQR ddPTM_KYSE-520_SHP099_60min_R1 3 KEDLYLKPIQR 11 2 P13639 P13639 EEF2 Elongation factor 2 0 ;; 174.68 5.7628e-06 6187080000.0 6541420.0 4874560.0 3816630.0 3601260.0 6037930.0 4467930.0 4121090.0 4257310.0 4230220.0 3805200.0 False True 6178554.392602515 4640378.820736272 4062656.076623912 3943522.6676417016 6513080.739877697 4440043.991575514 4537689.995162516 4242542.385273625 3462118.683168198 3771488.8884008066 1.6382268582587174 1.2303837974991076 1.0772021864146515 1.0456142877074315 1.7269256075256223 1.177265563536683 1.2031561352648172 1.1248985508936646 0.9179713332355095 1.0 21.846702744771985 -7.310665961425463 1.5235102156697702 0.9629349864174775 1.3055499993633182 0.30928633323883126 0.2091367473915144 0.5770324201123674 2.384332501172056 0.17790561750082226 0.06621243203675026 4.890283519799389e-08 7.310665961425463 0.3426150129458406 KEDMEYALR ddPTM_KYSE-520_SHP099_60min_R1 1 KEDMEYALR 9 1 Q13242;H0YIB4 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 0 141.88 0.00096346 752410000.0 1173600.0 970700.0 809090.0 642570.0 1109800.0 1156600.0 875030.0 915520.0 970920.0 1031000.0 False True 1108498.0684864018 924066.1149495958 861245.2359897714 703639.6596042857 1197134.9461017714 1149381.230381015 963486.5718698358 912344.2748039735 794625.4029014246 1021866.142105863 1.0847781551916453 0.9042927217896458 0.8428160993913706 0.6885830057488981 1.1715183591803073 1.1247864891700676 0.9428696501131563 0.8928217084517678 0.777621813815907 1.0 19.96277479420246 -11.144865271421882 2.382453772171934 1.1395398315073957 0.9369985931639496 0.01680085642983309 0.14530655888088992 62864609.2334178 15094264.637263848 47430063.91548725 0.04089148144411318 7.163656095613513e-12 11.144865271421882 -0.20254123834344606 KEDMTYAVR ddPTM_KYSE-520_SHP099_60min_R1 4 KEDMTYAVR 9 1 J3KTL2;Q07955;J3KSR8;Q07955-3;Q07955-2 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 0 ;;; 180.07 6.233100000000001e-05 3128810000.0 6389700.0 6169370.0 4231580.0 4003390.0 6435560.0 5777210.0 4733050.0 5256780.0 5043440.0 5035550.0 False True 6035250.603448847 5872984.204786839 4504354.41756739 4383870.981936907 6942001.958672481 5741152.289442763 5211512.884116569 5238545.457121673 4127678.4307761313 4990938.944598622 1.209241521573895 1.1767293228747666 0.9025064156399205 0.8783659809505974 1.3909210342445426 1.150315071607127 1.04419487835183 1.0496112084863352 0.8270344471441105 1.0 22.250879824423134 -7.5851109638810925 4.846339026769184 0.9143322547549614 1.1026502848700186 0.21581826741402044 0.14537608882579456 0.34345447763200576 15.986530074960196 0.11110900163859724 0.03976859559655317 2.5994952974370884e-08 7.5851109638810925 0.1883180301150572 KEDS(ph)DEEEDDDS(ph)EEDEEDDEDEDEDEDEIEPAAMK ddPTM_KYSE-520_SHP099_60min_R1 4 KEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMK 35 1 P19338;C9J1H7;C9JWL1 P19338 NCL Nucleolin 2 KEDS(1)DEEEDDDS(1)EEDEEDDEDEDEDEDEIEPAAMK;KEDS(1)DEEEDDDS(1)EEDEEDDEDEDEDEDEIEPAAMK;KEDS(1)DEEEDDDS(1)EEDEEDDEDEDEDEDEIEPAAMK;KEDS(1)DEEEDDDS(1)EEDEEDDEDEDEDEDEIEPAAMK 288.63 6.5739e-54 2998430000.0 951516.0 875553.0 857083.0 825292.0 841428.0 835919.0 883820.0 919614.0 1111750.0 818034.0 True False 898733.5106798797 833490.1196481546 912331.9415612874 903727.5035469118 907643.5965295753 830701.7194525911 973165.1508519694 916424.073673521 909884.224936821 810786.8551808222 1.1084707465804235 1.0280015201557122 1.1252426401977356 1.1146301864321195 1.1194601771474848 1.0245623916378461 1.200272481767028 1.1302897522544808 1.1222237004988174 1.0 19.62896317384946 -4.785789085457867 24.99990083365612 1.1106878239384206 1.0682360642314563 0.05409738149564991 0.056350777336552346 501.5784747408854 514971.3356665784 0.014179817046647803 0.029541877553937793 1.637611632268481e-05 4.785789085457867 -0.04245175970696424 KEDS(ph)KTPQKEESDVPQWSSQFLQK ddPTM_KYSE-520_SHP099_60min_R1 1 KEDSKTPQKEESDVPQWSSQFLQK 24 3 D6R9T3;E7EMP6;Q96FZ2 D6R9T3 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 1 KEDS(0.355)KT(0.355)PQKEES(0.28)DVPQWS(0.005)S(0.005)QFLQK 53.55 0.040862 473650000.0 341870.0 359410.0 338120.0 305870.0 330010.0 330000.0 297400.0 340730.0 447630.0 343180.0 True False 322905.78959905077 342143.40411459125 359915.756211128 334939.7928368312 355979.90949995146 327940.347592715 327464.0943442959 339548.0871569797 366351.6758340182 340139.6921900003 0.949332868269538 1.0058908500554287 1.0581410064018077 0.9847124594025195 1.0465697408260806 0.9641343104689152 0.9627341408934307 0.9982606998048021 1.0770624077279873 1.0 18.375767843859176 -7.648089911810619 14.836202551322003 1.0385191291993925 0.9976797146479711 0.16967116521673709 0.037329086215788156 1.2466332658310413 155.66010315295262 0.02531252042370416 0.00956460454721324 2.248589033167342e-08 7.648089911810619 -0.04083941455142137 KEEAS(ph)SPGAGEGPAEEGTR ddPTM_KYSE-520_SHP099_60min_R1 1 KEEASSPGAGEGPAEEGTR 19 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 KEEAS(0.743)S(0.257)PGAGEGPAEEGTR 132.35 4.7706e-06 622360000.0 330630.0 301830.0 275120.0 256210.0 277550.0 272150.0 279900.0 289680.0 373250.0 325350.0 True False 312289.29480543523 287329.6337439332 292854.67540756427 280560.12136765453 299391.60595652123 270451.4109010834 308195.0235607546 288675.16769182024 305477.2088668031 322467.6521184701 0.9684360361538047 0.891033974590333 0.9081676052888975 0.8700411328841774 0.9284391906898275 0.8386931499154628 0.9557393479192389 0.8952065914064615 0.9473111701590925 1.0 18.29879492034042 -8.03446420793635 2.8056903518140692 1.0000248439908255 0.9051793629317522 0.39046777633416074 0.03623438452727183 0.266824982568836 5.085199187648995 0.032706042928917 0.00879836050683666 9.237103121958538e-09 8.03446420793635 -0.09484548105907331 KEEASS(ph)PGAGEGPAEEGTR ddPTM_KYSE-520_SHP099_60min_R1 1 KEEASSPGAGEGPAEEGTR 19 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 KEEAS(0.229)S(0.771)PGAGEGPAEEGTR 107.56 0.00011025 330200000.0 474540.0 461990.0 410900.0 400890.0 432220.0 445040.0 475600.0 457580.0 528160.0 434600.0 True False 448216.3202279632 439795.3069388722 437387.2714632448 438990.4650680267 466233.2550046028 442262.3402807943 523678.2894086992 455992.76177997474 432259.45783011615 430749.7821136832 1.0405491513624732 1.0209994878715962 1.0154091531213123 1.019131020598331 1.0823760669519151 1.0267267881381603 1.2157366321557195 1.0586024200463309 1.0035047625770697 1.0 18.71649054112827 -5.757776657768727 24.896907064932588 1.0730952946493086 1.023191068662869 0.09454675344350938 0.05775957034431418 186.10654379892196 1265029.423705489 0.01761739252127265 0.021866196308937796 1.746720198160332e-06 5.757776657768727 -0.04990422598643973 KEECPAVR ddPTM_KYSE-520_SHP099_60min_R1 2 KEECPAVR 8 1 H7BZ94;P07237;H0Y3Z3;I3L398 H7BZ94 P4HB Protein disulfide-isomerase 0 ; 79.148 0.029754000000000003 2248000000.0 1250190.0 1050370.0 792040.0 783860.0 1117620.0 1133330.0 861190.0 1064080.0 1052750.0 945260.0 False True 1180839.4685080217 999908.6485624859 843096.1657088073 858357.8187238974 1205570.3356120596 1126256.4670825824 948247.4896044506 1060388.9548381388 861597.1376678561 936885.7318011522 1.260387930380657 1.0672685201856718 0.899892203596659 0.9161819735195607 1.2867848177112957 1.202127889083514 1.0121271542704098 1.131823144322577 0.9196395125064455 1.0 19.837513573317324 -7.7617507262108445 24.99999996997154 0.9598197286528855 1.0904721186868944 0.1584892104095318 0.12577360753936384 17.359140227367643 1392838.0977307041 0.10661974465591882 0.034033831018539226 1.7308095140173533e-08 7.7617507262108445 0.13065239003400897 KEEDRPPLR ddPTM_KYSE-520_SHP099_60min_R1 3 KEEDRPPLR 9 2 P53618 P53618 COPB1 Coatomer subunit beta 0 ;; 123.96 0.00045863 3192360000.0 4444160.0 3598160.0 2785010.0 2296870.0 4193580.0 3768860.0 2768960.0 3028930.0 3269430.0 2974610.0 False True 4197633.585586676 3425298.9926517303 2964536.2007735493 2515163.8342208564 4523590.887793722 3745337.146752367 3048873.4992453945 3018423.348787577 2675783.9276232873 2948257.269611562 1.423767738607059 1.1618046457333147 1.0055215436352105 0.853101885017054 1.5343270529405706 1.2703562831359765 1.0341273574293903 1.0237991710897263 0.9075815585034838 1.0 21.491430991110693 -6.90440086466134 5.14233497396858 0.9841184903178268 1.1949136810251315 0.2532953818428457 0.18305616051329918 0.352999489418299 15.090310226999883 0.08452318947204766 0.05615280725773827 1.2462326792892254e-07 6.90440086466134 0.21079519070730468 KEEELQAALAR ddPTM_KYSE-520_SHP099_60min_R1 2 KEEELQAALAR 11 1 P35579;P35749-4;P35749-3;P35749;P35749-2;Q7Z406;Q7Z406-6;Q7Z406-2;Q7Z406-5;Q7Z406-4;A0A0C4DFM8 P35579 MYH9;MYH11;MYH14 Myosin-9;Myosin-11;Myosin-14 0 ; 154.36 9.7266e-05 2418100000.0 3690100.0 3395400.0 2468830.0 2599700.0 4097600.0 3710300.0 2540330.0 3310800.0 3405700.0 3359300.0 False True 3485402.796968022 3232279.887400696 2627974.7320676683 2846774.706371696 4420057.807845214 3687142.641434094 2797131.3476316202 3299315.607546531 2787310.7307104445 3329539.2154958523 1.0468123579223132 0.9707889525245698 0.7892908183321387 0.8550056095217787 1.327528382087837 1.1074032779893195 0.8400956308349283 0.9909225853809864 0.8371460884852031 1.0 21.666891101720786 KEEENADS(ph)DDEGELQDLLSQDWR ddPTM_KYSE-520_SHP099_60min_R1 10 KEEENADSDDEGELQDLLSQDWR 23 1 J3QQQ3;Q96NB3 J3QQQ3 ZNF830 Zinc finger protein 830 1 KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR;KEEENADS(1)DDEGELQDLLSQDWR 219.73 3.4908e-21 9161427000.0 2491397.0 2306508.0 2117351.0 2050170.0 2152897.0 2136215.0 1933838.0 2204505.0 2569065.0 2089087.0 True False 2353194.2419332126 2195699.8935409086 2253838.83334138 2245017.540393915 2322317.7455917015 2122882.089796282 2129329.2174801063 2196858.086690337 2102587.5568583896 2070579.3144650923 1.1364907518846388 1.0604278127390352 1.0885063989560964 1.0842460970754393 1.1215787433825701 1.0252599719150104 1.0283736549498907 1.0609871697949746 1.0154585927569582 1.0 20.981603036168092 -6.273906501183854 24.650041336878875 1.0299749319753526 1.0948294288454392 0.6869378244804416 0.024253713153489745 405.45912187918213 801672.0602622065 0.008269277882422 0.007336151564732281 5.322228286436452e-07 6.273906501183854 0.0648544968700866 KEEEPDKAVTEDGKVDYR ddPTM_KYSE-520_SHP099_60min_R1 1 KEEEPDKAVTEDGKVDYR 18 3 Q92620 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 0 101.64 0.00031286 663630000.0 869140.0 793940.0 610810.0 488590.0 727910.0 756080.0 578290.0 623490.0 657630.0 579120.0 False True 820927.0716123641 755797.9306717651 650183.7899305543 535025.4467000595 785192.375758643 751361.0242663642 636749.1967665185 621327.2587136597 538220.969503217 573989.4473485417 1.4302128295293821 1.3167453411609926 1.132745197553685 0.9321172177842805 1.3679561172870367 1.3090153969505256 1.1093395526832175 1.0824715708342514 0.9376844330317364 1.0 19.130664687996532 -1.0000000000000002 0.1716469795841324 0.9707985783229572 2.568485150595919 0.3968374802986463 0.1343549366999594 73.95372394236695 0.8049311341573742 0.37792565223078334 30.430655396520873 0.09999999999999995 1.0000000000000002 1.5976865722729618 KEEGEAFAR ddPTM_KYSE-520_SHP099_60min_R1 1 KEEGEAFAR 9 1 H7C125;P61019-2;P61019 H7C125 RAB2A Ras-related protein Rab-2A 0 76.655 0.037209 923230000.0 239840.0 306580.0 292070.0 212680.0 316800.0 319280.0 205150.0 273350.0 254120.0 249020.0 False True 226535.5970908136 291851.43661403854 310897.29952852265 232893.0432554261 341730.35765457014 317287.25508909766 225888.5640710568 272401.81265036936 207978.21384389044 246813.87653462848 0.9178397919576868 1.1824758020568231 1.259642706859325 0.9435978500291119 1.384567036718556 1.2855324811714208 0.9152182496487964 1.1036730044315433 0.8426520289863471 1.0 17.91306398336865 -6.772353707523862 24.999893206681158 0.9740252167462391 1.1677841157098154 0.29570704965856776 0.1484740685895867 294.17840703389203 673825.9238744623 0.06177093804228367 0.042098648592541414 1.6890647266003863e-07 6.772353707523862 0.19375889896357634 KEEIPVQEKT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 KEEIPVQEKTPK 12 2 Q96B01-2;Q96B01;Q96B01-3;H0YGT5;F5H1Y0;H0YFK6;F5H4V6;F5H031;F5H710 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 KEEIPVQEKT(1)PK;KEEIPVQEKT(1)PK;KEEIPVQEKT(1)PK;KEEIPVQEKT(1)PK 171.09 4.746e-06 12890000000.0 15286560.0 14613940.0 13592730.0 12412060.0 12905930.0 12887640.0 12390910.0 12518890.0 15293500.0 13199700.0 True False 14438584.043798143 13911864.386428861 14468939.124936948 13591698.450578077 13921553.266303174 12807203.458332688 13643504.106427979 12475464.892520893 12516585.917761434 13082760.927211214 1.1036343264338733 1.0633737376866048 1.1059545615362107 1.0389013852808628 1.0641143214156985 0.978937361126474 1.0428612264900796 0.9535804377937391 0.9567235836074802 1.0 23.64116369707127 -6.163913823154837 0.7736428376884912 0.9714377661184163 1.0925511673476775 0.714315747371316 0.028495917573663362 0.3420332917012602 0.4516661614511083 0.018201035486976918 0.01957729328594486 6.856242610479335e-07 6.163913823154837 0.12111340122926129 KEEKEDEIS(ph)LEDLIER ddPTM_KYSE-520_SHP099_60min_R1 1 KEEKEDEISLEDLIER 16 2 Q8WU90;Q8WU90-2 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 1 KEEKEDEIS(1)LEDLIER 53.201 0.053315999999999995 103680000.0 168430.0 182750.0 145570.0 177630.0 180620.0 117610.0 176750.0 193400.0 182390.0 141580.0 True False 159086.85214311932 173970.4156866575 154953.67512023504 194511.9017935931 194833.76641277893 116875.95236478576 194617.61491376688 192729.1405398992 149272.5736777395 140325.71134757326 1.1336971009473562 1.2397615092486476 1.104242933331225 1.386145845445286 1.3884395421320508 0.8328905034038651 1.3868991865055849 1.3734413935200207 1.0637578263045875 1.0 17.09841984715206 KEEKEDEISLEDLIER ddPTM_KYSE-520_SHP099_60min_R1 2 KEEKEDEISLEDLIER 16 2 Q8WU90;Q8WU90-2 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 0 ; 188.96 2.6478e-12 488563000.0 620520.0 510640.0 395310.0 369980.0 573530.0 536070.0 470010.0 452860.0 463300.0 384370.0 False True 586098.518624048 486108.0879137333 420792.31511836295 405142.7879614568 618663.5480606857 532724.1882849295 517523.1976555564 451289.13435831876 379176.39884257235 380964.7808353349 1.5384585350354956 1.2759921976195607 1.1045438746219503 1.063465202933214 1.6239389549452652 1.3983554782067633 1.3584541765797673 1.184595419473645 0.9953056500686462 1.0 18.539298105061494 -7.578916970199375 2.816547177636176 0.9931818858303205 1.3283928246903351 0.41264249171052725 0.16165247160959464 0.3051583934098029 4.629025820745933 0.14403646260412786 0.046867379747650845 2.6368354562297606e-08 7.578916970199375 0.33521093886001463 KEELER ddPTM_KYSE-520_SHP099_60min_R1 1 KEELER 6 1 Q5C9Z4 Q5C9Z4 NOM1 Nucleolar MIF4G domain-containing protein 1 0 94.40700000000001 0.034262 624170000.0 1374800.0 1413600.0 616660.0 548930.0 1732800.0 2164900.0 1005900.0 978270.0 975910.0 2857800.0 False True 1298537.1034041469 1345688.534143143 656410.8902908859 601100.1421581776 1869161.5017166622 2151388.0560711217 1107586.1886379535 974876.6096999337 798709.3446890889 2832482.115334758 0.45844494352638787 0.47509162612456685 0.2317440547063464 0.21221674760235382 0.6599023138035788 0.7595416205538368 0.391030249632151 0.34417749874643694 0.28198213163110936 1.0 21.433635416032168 -5.763904119945444 24.999820888078016 0.5402325325335465 0.3456662773438691 0.20479004432772818 0.2148145082060781 129.94256327521194 1318008.6463151595 0.06794477896383885 0.08069133047845604 1.72224875729333e-06 5.763904119945444 -0.1945662551896774 KEELLK ddPTM_KYSE-520_SHP099_60min_R1 3 KEELLK 6 1 P42766;F2Z388 P42766 RPL35 60S ribosomal protein L35 0 ;; 102.72 0.027608999999999998 2314950000.0 4566700.0 3956400.0 2830880.0 2809970.0 4687600.0 4346800.0 3322310.0 3811200.0 4157800.0 3801670.0 False True 4313376.047509243 3766328.6053225305 3013363.05436815 3077028.7039517127 5056487.451204429 4319670.008836404 3658161.517420973 3797979.8367407667 3402848.329608561 3767990.1614545044 1.1447418551231596 0.9995590338454248 0.799726890264741 0.8166233381999942 1.3419587723266624 1.1464122313867569 0.9708521945845168 1.0079590641167402 0.9030937406415646 1.0 21.845363767279295 -4.260908048923432 19.954043306873537 1.0013152311587072 1.1447424057419617 0.07938841845780054 0.14915244935435282 8.427338470900851 314680.72672844544 0.04027848156256276 0.2300484530389298 5.483930612487732e-05 4.260908048923432 0.1434271745832545 KEELTLEGIR ddPTM_KYSE-520_SHP099_60min_R1 4 KEELTLEGIR 10 1 P60842;P60842-2;J3KT12;J3QS69;J3KSZ0;J3KTB5;J3KTN0 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ;;; 160.72 0.00018487 2579220000.0 3649950.0 3268290.0 2269400.0 1838230.0 3022800.0 3096930.0 2370530.0 2687280.0 2496160.0 2781820.0 False True 3447479.997505067 3111276.442596697 2415689.1551683825 2012934.8265159996 3260677.1626206897 3077600.9111221475 2610166.3065433204 2677958.4528958662 2042920.2670729 2757175.239023208 1.2503666610347244 1.1284289799798641 0.8761463983058962 0.7300714144049573 1.1826151332244876 1.1162152000945929 0.9466813242773902 0.9712688606055354 0.7409468350646623 1.0 21.394759533602056 -4.576321618223387 4.422988387356204 0.9520457274436217 1.2271591851399428 0.3552095038531127 0.13548438980867708 0.21989390168270892 8.813696242006163 0.03704023512210736 0.11427455658019452 2.6526404127339737e-05 4.576321618223387 0.2751134576963211 KEENLADWYSQVITK ddPTM_KYSE-520_SHP099_60min_R1 1 KEENLADWYSQVITK 15 1 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 0 153.72 7.7379e-06 403390000.0 1198700.0 914240.0 656320.0 764970.0 1029500.0 1015800.0 743210.0 867250.0 777190.0 684970.0 False True 1132205.721450792 870318.538097782 698627.4373491298 837672.5188033826 1110515.7929462756 1009460.0154081212 818340.9198306121 864241.7121676723 636071.8873655479 678901.6986985963 1.6677020010719452 1.2819507445129645 1.0290553679396388 1.2338642257180061 1.6357534457124663 1.486901590234905 1.2053894126341271 1.2729997786488956 0.9369130885735741 1.0 19.372843169574196 -7.591314358996558 1.8955464083035896 0.9602683338581942 1.3615224366881518 0.40253639202004865 0.18715583613322184 0.3951392396543777 2.5730213914230737 0.18059115479000448 0.056558574210533105 2.5626284363098072e-08 7.591314358996558 0.40125410282995755 KEEPSQNDIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 KEEPSQNDISPK 12 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KEEPS(0.009)QNDIS(0.991)PK;KEEPSQNDIS(1)PK;KEEPSQNDIS(1)PK;KEEPSQNDIS(1)PK;KEEPSQNDIS(1)PK 226.62 3.585800000000001e-11 8330000000.0 10854700.0 9987810.0 9203950.0 9287970.0 9529830.0 9401550.0 9423690.0 10192770.0 11000300.0 9973170.0 True False 10252568.152692014 9507980.615591541 9797251.343840672 10170695.87626999 10279773.403684493 9342871.439122094 10376328.551551443 10157413.659880394 9002922.814996652 9884815.472808842 1.037203798178609 0.9618774009232749 0.9911415514827726 1.0289211674459224 1.0399560246685537 0.9451740869440074 1.049724052016414 1.0275774684738845 0.9107830934995094 1.0 23.23678260367032 -7.743140294127297 24.99957166905378 0.9553914932962863 1.008717366670409 0.245031295318069 0.03840996241143672 293.8386363078922 401435.1639249395 0.025326637971184566 0.009533182179709498 1.80659043227122e-08 7.743140294127297 0.053325873374122756 KEEQLSSYEDKLFDVCGS(ph)QDFESDLDR ddPTM_KYSE-520_SHP099_60min_R1 1 KEEQLSSYEDKLFDVCGSQDFESDLDR 27 2 A0A494C1B7;A0A1W2PQ90;Q92878-3;Q92878;Q92878-2;E7EN38 A0A494C1B7 RAD50 DNA repair protein RAD50 1 KEEQLSSYEDKLFDVCGS(1)QDFESDLDR 178.76 6.7556e-11 112670000.0 76326.0 67881.0 79384.0 43767.0 68974.0 65566.0 60183.0 47053.0 82096.0 44834.0 True False 72092.04462789121 64619.89486854168 84501.21965889086 47926.602520971646 74401.86139162345 65156.77827352713 66266.8849694779 46889.78412525277 67189.43587174577 44436.80564032418 1.6223498424124188 1.454197571976289 1.9016042769332238 1.0785339276836012 1.6743296535272887 1.4662795251511196 1.4912612194910793 1.055201503564033 1.5120221830431193 1.0 15.439467491224683 -9.251983098808765 0.1359707894756078 0.5331155521970381 1.8170678762110257 0.34940597871075996 0.22529764134586253 23.64412192292179 0.943252951416445 6.570662094054872 2.274425880144659 5.597793856870598e-10 9.251983098808765 1.2839523240139876 KEES(ph)DEEETASK ddPTM_KYSE-520_SHP099_60min_R1 9 KEESDEEETASK 12 1 A0A1B0GVJ7;Q9BY89-2;Q9BY89 A0A1B0GVJ7;Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 KEES(1)DEEETASK;KEES(1)DEEETASK;KEES(1)DEEETASK;KEES(1)DEEETASK;KEES(0.999)DEEET(0.001)ASK;KEES(1)DEEETASK;KEES(0.998)DEEET(0.002)ASK;KEES(1)DEEETASK;KEES(0.994)DEEET(0.006)ASK 277.94 6.9106999999999995e-34 8296839000.0 13414860.0 11964900.0 10835510.0 11273910.0 11909670.0 11243870.0 11215820.0 11913350.0 14403910.0 10866820.0 True False 12670710.973939572 11390088.244318957 11533984.312028978 12345379.016775373 12846893.272247152 11173692.836628187 12349624.541454738 11872025.3694468 11788523.037022477 10770548.429058041 1.1764220789124396 1.057521659118996 1.0708818021662898 1.1462163786821264 1.1927798623129817 1.037430258099253 1.1466105577443466 1.1022674887582387 1.094514649339306 1.0 23.360588377021966 -8.478595192400961 1.2602450716805411 0.9999469163907109 1.1154612987669927 0.3444060058780145 0.04810571994471419 2.405247683790083 5.105732659609627 0.04603294850670876 0.013830201124611996 3.322039619078871e-09 8.478595192400961 0.11551438237628187 KEES(ph)EES(ph)DDDMGFGLFD ddPTM_KYSE-520_SHP099_60min_R1 137 KEESEESDDDMGFGLFD 17 1 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 2 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223.89 1.7212000000000001e-18 863671369200.0 161105755.0 150607862.0 139785955.0 135862713.0 148792705.0 145654312.0 134282829.7 144131457.0 181628995.0 149159962.0 True False 152168897.6137897 143372434.24251026 148796781.32473582 148775064.39490578 160501844.36881593 144745229.41108423 147857448.6002009 143631498.6162018 148649748.0023647 147838520.7813743 1.0292912619087904 0.969790779052311 1.0064818055422686 1.006334909254919 1.0856564548976266 0.9790765535670878 1.0001280303585733 0.9715431259529854 1.005487252014582 1.0 27.139446985954333 -9.101045701391666 9.574056901039523 1.0000325722812091 1.0053053581256917 0.0027599896072877383 0.031859110223861724 0.0 0.0 0.03136743824696502 0.0076077212410162395 7.924179388887761e-10 9.101045701391666 0.0052727858444825415 KEES(ph)EESDDDMGFGLFD ddPTM_KYSE-520_SHP099_60min_R1 14 KEESEESDDDMGFGLFD 17 1 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 1 KEES(0.5)EES(0.5)DDDMGFGLFD;KEES(0.539)EES(0.461)DDDMGFGLFD;KEES(0.927)EES(0.073)DDDMGFGLFD;KEES(0.998)EES(0.002)DDDMGFGLFD;KEES(0.976)EES(0.024)DDDMGFGLFD;KEES(0.567)EES(0.433)DDDMGFGLFD;KEES(0.583)EES(0.417)DDDMGFGLFD;KEES(0.923)EES(0.077)DDDMGFGLFD;KEES(0.997)EES(0.003)DDDMGFGLFD;KEES(0.551)EES(0.449)DDDMGFGLFD;KEES(0.998)EES(0.002)DDDMGFGLFD;KEES(0.921)EES(0.079)DDDMGFGLFD;KEES(0.552)EES(0.448)DDDMGFGLFD;KEES(0.719)EES(0.281)DDDMGFGLFD 184.32 3.8163e-12 17632185000.0 13664371.0 13552294.0 11010645.0 11081334.0 12894325.0 13270436.0 11821317.0 11183314.0 16113232.0 11283143.0 True False 12906381.10138174 12901221.453831991 11720408.794354884 12134500.65163545 13909035.018826567 13187610.286505701 13016331.087295981 11144521.693939105 13187475.250323543 11183183.131172424 1.1540883261945347 1.1536269506193315 1.0480387074843633 1.0850667926389659 1.24374561837014 1.1792358340038323 1.1639200516187356 0.996542895097054 1.1792237590712684 1.0 23.41482755310202 -8.69778747239218 0.654797855605381 0.9973787103134484 1.1395458083016923 0.25029651905711336 0.06850119865595125 3.768009945556702 2.3493284893768185 0.10732246312078156 0.02807525415156481 2.0054531816633556e-09 8.69778747239218 0.1421670979882439 KEES(ph)LGK ddPTM_KYSE-520_SHP099_60min_R1 1 KEESLGK 7 1 R4GNH1;Q92805 R4GNH1 GOLGA1 Golgin subfamily A member 1 1 KEES(1)LGK 47.894 0.056478 439720000.0 797790.0 507000.0 440380.0 634960.0 690120.0 815450.0 770390.0 526850.0 755020.0 933480.0 True False 753534.9983450632 482642.95897748525 468767.59943291347 695306.4074923143 744428.51775433 810360.4740741802 848268.5394818494 525022.480317715 617927.4005053291 925210.0934364494 0.8144474467915236 0.5216576887794587 0.5066607063178479 0.7515119132669442 0.8046048384419868 0.8758664435493884 0.9168388299042212 0.5674629838587872 0.6678779283634925 1.0 19.81942147935523 -5.427769668526129 5.950362540390705 0.7917312272412601 0.6059635232924324 0.27157357401816473 0.13872620316675505 0.3281443670393444 16.760431199426467 0.04075695349227286 0.060611945857746166 3.734481664381198e-06 5.427769668526129 -0.1857677039488277 KEES(ph)PPPPK ddPTM_KYSE-520_SHP099_60min_R1 10 KEESPPPPK 9 1 E9PGM9;P78332-2;P78332 E9PGM9 RBM6 RNA-binding protein 6 1 KEES(1)PPPPK;KEES(1)PPPPK;KEES(1)PPPPK;KEES(1)PPPPK;KEES(1)PPPPK;KEES(1)PPPPK;KEES(1)PPPPK;KEES(1)PPPPK;KEES(1)PPPPK;KEES(1)PPPPK 106.26 0.0015755 27921080000.0 18424050.0 16146540.0 15381000.0 15128360.0 15302360.0 14807490.0 14951610.0 15056840.0 18742230.0 14925880.0 True False 17402031.219066896 15370835.981949368 16372483.870470116 16566154.785892703 16506568.673481626 14715070.96235046 16463064.652451623 15004611.336332891 15339113.48516991 14793648.31535894 1.1763177580069888 1.0390159110373867 1.106723880509719 1.1198153716209087 1.1157875543346742 0.9946884398402995 1.1128468313904336 1.0142603782702422 1.036871578814312 1.0 23.818474548792445 -6.775511658745386 0.3769715346298462 0.9957298231928979 1.1267116923126301 0.42183859241367494 0.04483962337644235 1.3827773539574852 0.481501108756764 0.05169183853787743 0.06388580994100095 1.6768273202901674e-07 6.775511658745386 0.1309818691197322 KEESDEEET(ph)ASK ddPTM_KYSE-520_SHP099_60min_R1 2 KEESDEEETASK 12 1 A0A1B0GVJ7;Q9BY89-2;Q9BY89 A0A1B0GVJ7;Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 KEES(0.019)DEEET(0.98)ASK;KEES(0.302)DEEET(0.694)AS(0.004)K 250.05 1.2300999999999998e-15 4883500000.0 2562030.0 2463420.0 2123460.0 2340940.0 2399080.0 2340020.0 2245200.0 2297110.0 3005890.0 2233530.0 True False 2419909.088619815 2345073.6055311947 2260341.629256127 2563422.233770728 2587873.94710204 2325415.067193652 2472166.7270403896 2289141.861559502 2460096.1483205277 2213742.661860045 1.0931302586844234 1.059325298253412 1.0210498574197093 1.1579585459209938 1.1690039640504737 1.0504450708104334 1.1167362718497775 1.034059604577573 1.111283705511412 1.0 21.078056094046968 -10.342134608464896 9.030655720859894 0.9999998982656028 1.089634010121088 0.24654626541144053 0.04736030929692005 1.0118752089048957e-07 7.428365357950429e-09 0.04738799419190921 0.011493263603340971 4.5484705961596056e-11 10.342134608464896 0.0896341118554852 KEESEES(ph)DDDMGFGLFD ddPTM_KYSE-520_SHP099_60min_R1 30 KEESEESDDDMGFGLFD 17 1 P05387;H0YDD8;P05386-2;P05386 P05387 RPLP2;RPLP1 60S acidic ribosomal protein P2;60S acidic ribosomal protein P1 1 KEES(0.33)EES(0.67)DDDMGFGLFD;KEES(0.041)EES(0.959)DDDMGFGLFD;KEES(0.3)EES(0.7)DDDMGFGLFD;KEES(0.085)EES(0.915)DDDMGFGLFD;KEES(0.059)EES(0.941)DDDMGFGLFD;KEES(0.02)EES(0.98)DDDMGFGLFD;KEES(0.011)EES(0.989)DDDMGFGLFD;KEES(0.113)EES(0.887)DDDMGFGLFD;KEES(0.206)EES(0.794)DDDMGFGLFD;KEES(0.381)EES(0.619)DDDMGFGLFD;KEES(0.212)EES(0.788)DDDMGFGLFD;KEES(0.023)EES(0.977)DDDMGFGLFD;KEES(0.048)EES(0.952)DDDMGFGLFD;KEES(0.126)EES(0.874)DDDMGFGLFD;KEES(0.05)EES(0.95)DDDMGFGLFD;KEES(0.214)EES(0.786)DDDMGFGLFD;KEES(0.214)EES(0.786)DDDMGFGLFD;KEES(0.013)EES(0.987)DDDMGFGLFD;KEES(0.394)EES(0.606)DDDMGFGLFD;KEES(0.319)EES(0.681)DDDMGFGLFD;KEES(0.016)EES(0.984)DDDMGFGLFD;KEES(0.156)EES(0.844)DDDMGFGLFD;KEES(0.392)EES(0.608)DDDMGFGLFD;KEES(0.178)EES(0.822)DDDMGFGLFD;KEES(0.001)EES(0.999)DDDMGFGLFD;KEES(0.002)EES(0.998)DDDMGFGLFD;KEES(0.283)EES(0.717)DDDMGFGLFD;KEES(0.126)EES(0.874)DDDMGFGLFD;KEES(0.052)EES(0.948)DDDMGFGLFD;KEES(0.02)EES(0.98)DDDMGFGLFD 252.05 8.5371e-24 35800191000.0 21841693.0 20786007.0 20199899.0 18644086.0 19937057.0 19300515.0 18600891.0 19246362.0 25593280.0 19336502.0 True False 20630090.748954482 19787416.023287397 21502016.810521122 20416014.32789117 21505989.959562987 19180053.32672247 20481250.58948203 19179600.86235665 20946185.50608594 19165195.635850914 1.0764351766054137 1.0324661641477086 1.1219304628593976 1.0652651147322725 1.1221377735029912 1.0007752433710493 1.0686690070186016 1.0007516347226213 1.0929283428186594 1.0 24.191985389270467 -6.2659614503494 24.992032166038975 1.0349245844208645 1.0819092116823743 0.31551957413226506 0.03745458903995913 522.9161004658738 2889977.8991603185 0.01224000373460867 0.01118481460192916 5.420490026230803e-07 6.2659614503494 0.04698462726150976 KEESHSNDQS(ph)PQIR ddPTM_KYSE-520_SHP099_60min_R1 1 KEESHSNDQSPQIR 14 1 B5MBZ0;Q9HC35 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 KEESHSNDQS(1)PQIR 178.71 5.5010999999999995e-09 318320000.0 396690.0 343590.0 364200.0 362410.0 372220.0 359360.0 329440.0 351280.0 403670.0 316180.0 True False 374684.81491808983 327083.4206608957 387676.9147406039 396853.33743746026 401511.59635790356 357117.1009421767 362743.0102245619 350061.4916693687 330373.70369259856 313378.89118431805 1.195628759493293 1.0437315015851438 1.2370868799602281 1.266369077820387 1.281233700331619 1.139569738065521 1.1575221574551098 1.1170551096993808 1.0542308782957712 1.0 18.257548479361095 -7.607675303344732 1.0950437898935033 1.0021569882882682 1.1964481745771336 0.5289163166069849 0.06314464791556315 0.4235719412461434 0.9677288046590392 0.0643889503841942 0.022300080177783923 2.467883740413281e-08 7.607675303344732 0.19429118628886544 KEETPGT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 KEETPGTPK 9 1 Q99442 Q99442 SEC62 Translocation protein SEC62 1 KEET(0.012)PGT(0.988)PK;KEET(0.001)PGT(0.999)PK;KEET(0.003)PGT(0.997)PK;KEETPGT(1)PK;KEET(0.004)PGT(0.996)PK;KEETPGT(1)PK;KEET(0.232)PGT(0.768)PK;KEETPGT(1)PK;KEET(0.001)PGT(0.999)PK;KEETPGT(1)PK 179.8 3.1905999999999996e-05 46620150000.0 73118800.0 80842600.0 60399600.0 97730400.0 80831400.0 80838800.0 85586500.0 101665400.0 116337500.0 68589800.0 True False 69062754.40528582 76958800.14878343 64293054.85877694 107018667.83228382 87192371.31224611 80334255.06356968 94238418.66374597 101312746.45628275 95213542.62971677 67982147.73405685 1.015895447661587 1.1320442603526275 0.9457343876555434 1.5742172231883012 1.282577473917694 1.1816963385421968 1.3862230277337293 1.490284579601894 1.4005668517886187 1.0 26.01865260532512 -5.2450438636407775 24.924690780813368 1.3453115878788928 1.041306641451383 0.4313488062759432 0.1568759451747006 729.6259899068606 1109185.8922469264 0.04155033287273773 0.07167689349403113 5.687954797326145e-06 5.2450438636407775 -0.30400494642750986 KEEWDR ddPTM_KYSE-520_SHP099_60min_R1 3 KEEWDR 6 1 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 0 ;; 112.17 0.021619 4047260000.0 6796800.0 6148600.0 4548700.0 3896100.0 6694700.0 6383800.0 4905100.0 5802200.0 5583000.0 5095600.0 False True 6419767.954915112 5853212.026763241 4841916.480177333 4266384.172594822 7221534.802367578 6343956.33624962 5400955.377162753 5782073.522443667 4569267.93597686 5050456.948316817 1.271126161575271 1.158947019380882 0.9587085940393997 0.8447521117899429 1.4298775093557274 1.2561153181127287 1.0693993498870924 1.1448614613714663 0.9047236681226786 1.0 22.26798249327711 -7.7537531439435305 24.882254141133664 0.9523618285446473 1.137305436770549 0.18945914247122064 0.15645509524075185 267.3789607994395 865594.2015256335 0.1174748970761484 0.042518986722397074 1.762977850753063e-08 7.7537531439435305 0.18494360822590172 KEFS(ph)PFGTITSAK ddPTM_KYSE-520_SHP099_60min_R1 1 KEFSPFGTITSAK 13 1 P11940;P11940-2;E7ERJ7;E7EQV3;A0A087WTT1;H0YAR2;H0YAP2;H0YB86 P11940 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein 1 KEFS(0.999)PFGT(0.001)ITSAK 97.235 0.0011680999999999998 364200000.0 313860.0 299150.0 243400.0 286220.0 248400.0 356550.0 319180.0 294850.0 392710.0 310170.0 True False 296449.56013560144 284778.38496669545 259089.95345376947 313422.26274481893 267947.6667973331 354324.6391944931 351445.82929661195 293827.2341685074 321403.7634134825 307422.13510860864 0.964307791405031 0.926343136827433 0.8427823629623677 1.0195175524172666 0.8715952307815127 1.1525671014851107 1.14320274684336 0.955777742109239 1.0454802263992289 1.0 18.229861520603176 -6.251867099198267 24.99896447749351 1.0618789979979188 0.9256822922495878 0.47329779227932534 0.070914408184977 629.435937369659 1643835.4649808903 0.02408929980252778 0.023790663348813832 5.599289221562308e-07 6.251867099198267 -0.1361967057483311 KEFSPFGTITSAK ddPTM_KYSE-520_SHP099_60min_R1 2 KEFSPFGTITSAK 13 1 P11940;P11940-2;E7ERJ7;E7EQV3;A0A087WTT1;H0YAR2;H0YAP2;H0YB86 P11940 PABPC1 Polyadenylate-binding protein 1;Polyadenylate-binding protein 0 ; 154.07 9.529299999999999e-06 547410000.0 936750.0 791420.0 604200.0 569900.0 911760.0 847740.0 615870.0 687550.0 807740.0 710210.0 False True 884786.6101351721 753398.9952543607 643147.6987541813 624063.1246533178 983510.3247952366 842448.9402068143 678128.1499119749 685165.0495253758 661074.7774683771 703918.0919350185 1.2569454035525063 1.0702935524548358 0.9136683743789225 0.886556449966806 1.39719427027602 1.1967996701022199 0.9633622969511282 0.9733590560826587 0.9391359378917676 1.0 19.425048040751175 -6.785258041768758 23.95114720001788 0.9667440811510586 1.110549344774458 0.2107416003003103 0.1426587116719353 280.30085366607176 281855.6845539877 0.0654918578721534 0.044188452976620114 1.63961528477588e-07 6.785258041768758 0.14380526362339952 KEGITGPPADSSKPIGPDDAIDALSSDFTCGS(ph)PTAAGK ddPTM_KYSE-520_SHP099_60min_R1 7 KEGITGPPADSSKPIGPDDAIDALSSDFTCGSPTAAGK 38 2 P20810-6;P20810-7;P20810-10;P20810-9;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;H0YA91;E7EVY3 P20810-6;E7EVY3 CAST Calpastatin 1 KEGITGPPADSSKPIGPDDAIDALSSDFTCGS(0.984)PT(0.016)AAGK;KEGITGPPADSSKPIGPDDAIDALSSDFTCGS(0.994)PT(0.006)AAGK;KEGITGPPADSSKPIGPDDAIDALSSDFT(0.002)CGS(0.939)PT(0.059)AAGK;KEGITGPPADSSKPIGPDDAIDALSSDFT(0.001)CGS(0.983)PT(0.016)AAGK;KEGITGPPADSSKPIGPDDAIDALSSDFTCGS(0.995)PT(0.005)AAGK;KEGITGPPADSSKPIGPDDAIDALSSDFT(0.001)CGS(0.989)PT(0.011)AAGK;KEGITGPPADSSKPIGPDDAIDALS(0.006)S(0.02)DFT(0.015)CGS(0.733)PT(0.227)AAGK 265.07 7.5987e-42 43263210000.0 4919951.0 4535206.0 4471703.0 3868895.0 4763695.0 4627589.0 4052306.0 4519989.0 5997779.0 4957441.0 True False 4647031.51035084 4317327.896277012 4759956.130357771 4236593.6175743025 5138570.694783106 4598706.500534021 4461952.637175373 4504310.213132359 4908733.525304557 4913521.929570736 0.9457638689641144 0.8786625882942157 0.9687462880161845 0.862231547615058 1.0458019254697886 0.9359287628000434 0.9080966160591015 0.916717230063502 0.9990254639472835 1.0 22.22832606410408 KEGPVAS(ph)PPFMDLEQAVLPAVIPK ddPTM_KYSE-520_SHP099_60min_R1 2 KEGPVASPPFMDLEQAVLPAVIPK 24 1 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;Q9H4A3-4 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 1 KEGPVAS(1)PPFMDLEQAVLPAVIPK;KEGPVAS(1)PPFMDLEQAVLPAVIPK 131.5 2.4093e-05 156947500.0 344081.0 410398.0 297521.0 257577.8 281848.0 389214.0 276008.0 355506.0 460705.0 374502.0 True False 324994.1410215318 390681.8640600433 316699.6797104314 282057.9166684109 304027.8341042463 386784.771054397 303909.58221849473 354272.8326617242 377052.585427946 371184.203638147 0.875560268556999 1.0525282601759203 0.8532143248724279 0.7598866382346867 0.8190753569907603 1.0420291792143677 0.8187567769310689 0.9544394109160178 1.01580989097133 1.0 18.50177578991894 -7.508766984397709 6.339479465011332 1.0016768753443877 0.8913924862847513 0.22942286938612644 0.08853439850915668 0.24507200832814613 43.85888005723567 0.056945473891582346 0.024214386844751017 3.09908162906583e-08 7.508766984397709 -0.11028438905963633 KEGQWDCS(ph)VCLVR ddPTM_KYSE-520_SHP099_60min_R1 1 KEGQWDCSVCLVR 13 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KEGQWDCS(1)VCLVR 51.818999999999996 0.050049 293300000.0 185630.0 167380.0 166960.0 179060.0 171850.0 168820.0 158670.0 184950.0 207630.0 189710.0 True False 175332.73385576904 159338.81355749772 177722.50874544526 196077.80856364785 185373.61730725341 167766.33175940052 174709.91206997095 184308.45161765438 169929.62592636136 188029.3169921467 0.932475513183362 0.8474147335447308 0.9451850997941352 1.042804450392368 0.985876140341433 0.8922349686905873 0.929163147879051 0.9802112487881466 0.9037400584370506 1.0 17.520598094753115 -1.0000465373220484 0.008103850181911567 1.8001673224499473 1.7217312071087065e-05 0.09158692528614498 0.052125658914803336 56016.48899517749 35.19279959486935 3465.3409220864646 4404.314673903651 0.0999892849596998 1.0000465373220484 -1.800150105137876 KEHFWSIDQTEFR ddPTM_KYSE-520_SHP099_60min_R1 1 KEHFWSIDQTEFR 13 1 Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-5;Q9NZM1-3 Q9NZM1-2 MYOF Myoferlin 0 189.1 5.2325999999999995e-08 757830000.0 461750.0 701310.0 477030.0 617310.0 726010.0 622020.0 588060.0 608650.0 611350.0 475290.0 False True 436135.8070241954 667618.0149122295 507780.1170749867 675978.95679898 783142.8565681634 618137.7424533957 647506.8437125297 606538.7352099787 500344.2508793581 471079.3003700241 0.9258224818658318 1.4172094048450607 1.0779079375301244 1.4349578855789482 1.6624437880268121 1.3121734323029264 1.374517715390859 1.2875512355001666 1.0621231934545774 1.0 18.845610414573375 -7.783341893825297 3.2597712612427614 1.003044090743867 1.3283099061527888 0.2619675435589166 0.1892459718377958 0.3175976618641903 6.439907004901344 0.17717617344593575 0.049657028882097706 1.6468654033688322e-08 7.783341893825297 0.32526581540892185 KEIPAS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 4 KEIPASPSR 9 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 KEIPAS(0.916)PS(0.084)R;KEIPAS(0.885)PS(0.115)R;KEIPAS(0.5)PS(0.5)R;KEIPAS(0.94)PS(0.06)R 92.24700000000001 0.0026838 1765560000.0 4496390.0 4340550.0 4203350.0 3698330.0 4241680.0 3949430.0 3814900.0 3924140.0 4789100.0 4109990.0 True False 4246966.28336876 4132023.462701623 4474304.666597795 4049818.1712565427 4575476.084142163 3924780.1424033293 4200547.321836091 3910528.074241162 3919520.16338649 4073578.6861238373 1.0425639494421814 1.014347280629897 1.0983719749514065 0.9941671643785274 1.1232079791972547 0.9634722794904214 1.0311688187452368 0.959973619157502 0.962181036722789 1.0 21.957865345192214 -6.296205266313875 24.99971765697441 0.9838455997270614 1.05138122611079 0.4401264859511038 0.04005580384982166 601.8812956806289 432803.6590843819 0.013367372150619915 0.011789401131068591 5.055856439288586e-07 6.296205266313875 0.06753562638372856 KEIQNGNLHES(ph)DSESVPR ddPTM_KYSE-520_SHP099_60min_R1 1 KEIQNGNLHESDSESVPR 18 1 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 KEIQNGNLHES(0.9)DS(0.074)ES(0.026)VPR 50.055 0.049667 207380000.0 154950.0 223960.0 215570.0 136510.0 251760.0 185100.0 169570.0 178600.0 307010.0 165440.0 True False 146354.61461483286 213200.62542918627 229465.98712419506 149483.86935677196 271572.07968154823 183944.72224064104 186711.79044371983 177980.47828555343 251264.72309229025 163974.3303103724 0.8925458901878803 1.3002073252907196 1.3994018861968172 0.9116296988304649 1.6561865455862124 1.121789745336776 1.1386647537471855 1.085416710949025 1.5323418160433626 1.0 17.32311045737456 -11.2076627279585 2.4962824290700594 0.24982005542825392 1.2272896933480253 0.07579407049732256 0.23722481227083367 13400828.061053734 3473190.3627977916 58157104.98179155 0.05685325622815925 6.199223183555626e-12 11.2076627279585 0.9774696379197714 KEISS(ph)PARPCSFEEAMK ddPTM_KYSE-520_SHP099_60min_R1 2 KEISSPARPCSFEEAMK 17 2 O94916-2;O94916;O94916-4;O94916-5 O94916-2 NFAT5 Nuclear factor of activated T-cells 5 1 KEIS(0.064)S(0.936)PARPCSFEEAMK;KEIS(0.018)S(0.982)PARPCSFEEAMK 225.84 1.2037e-18 2288950000.0 2061450.0 2001230.0 1743170.0 1880030.0 1946300.0 1657360.0 1810680.0 1786020.0 2268950.0 1875750.0 True False 1947097.2591013042 1905087.9068925285 1855537.527370616 2058707.4859483687 2099462.737067834 1647015.801473524 1993721.2049338568 1779824.7134802002 1856965.8755749082 1859132.314311418 1.0473150534325828 1.024718839120459 0.9980664168369676 1.107348557227821 1.1292702089605866 0.8859056393108538 1.0723933899628266 0.9573416048870133 0.9988347043834198 1.0 20.826198019736477 -6.246728648028539 24.999725604202748 0.9858225546444279 1.0583494951501717 0.33058724572041887 0.05565687197465986 1080.0451737543738 1835453.2209459231 0.01852702036990357 0.018446092100717223 5.665931921269495e-07 6.246728648028539 0.07252694050574382 KEKDECT(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 6 KEKDECTPTR 10 2 O15042-2;O15042;E7ET15;O15042-3;H7C4V2 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 KEKDECT(0.869)PT(0.131)R;KEKDECT(0.991)PT(0.009)R;KEKDECT(0.985)PT(0.015)R;KEKDECT(0.995)PT(0.005)R;KEKDECT(0.981)PT(0.019)R;KEKDECT(0.985)PT(0.015)R 97.86 0.001861 3479950000.0 5701730.0 4770190.0 4270480.0 5052940.0 5367420.0 5333680.0 5199140.0 5746450.0 5695610.0 5069090.0 True False 5385443.670783038 4541022.912198832 4545761.973809588 5533169.898378197 5789805.417557735 5300390.524691867 5724719.80991661 5726516.906181519 4661430.798643951 5024181.806292347 1.071904616198053 0.9038333179964944 0.9047765684188458 1.1013076579849057 1.1523877201868993 1.0549758605577515 1.1394332511508443 1.1397909404889686 0.9277989886444632 1.0 22.260457240219846 -5.2706305171764605 24.63342030437273 1.084736297820668 0.9545376816121766 0.2949433174347297 0.07898825340198533 564.8663407519606 1513913.1062413747 0.021820860371070807 0.03288470404385686 5.362526888608324e-06 5.2706305171764605 -0.1301986162084915 KEKDECT(ph)PTRK ddPTM_KYSE-520_SHP099_60min_R1 2 KEKDECTPTRK 11 3 O15042-2;O15042;E7ET15;O15042-3;H7C4V2 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 KEKDECT(0.992)PT(0.008)RK;KEKDECT(0.967)PT(0.033)RK 71.98 0.014855000000000002 1514940000.0 3378200.0 2967300.0 2129470.0 2089050.0 3623700.0 3570600.0 2609900.0 2902500.0 3312800.0 3214200.0 True False 3190804.511725261 2824746.453991894 2266739.043472468 2287592.683904214 3908864.5739673753 3548314.560953176 2873734.1621693913 2892431.904948594 2711279.028892023 3185724.6886097584 1.0015945581027967 0.8866888165482391 0.7115301116813288 0.7180760760913439 1.226993841603178 1.1138170770499478 0.9020660738337314 0.9079353012801754 0.8510713554708388 1.0 21.603190163387783 -4.241391883005114 21.604688624212102 0.9229673357996984 1.0015950088059855 0.022951141673270947 0.1512031388092023 3936.7135882890075 4242052.8544738935 0.04142762648572346 1.2336681276209152 5.7359864534160126e-05 4.241391883005114 0.07862767300628715 KEKPELSEPSHLNGPS(ph)S(ph)DPEAAFLSR ddPTM_KYSE-520_SHP099_60min_R1 4 KEKPELSEPSHLNGPSSDPEAAFLSR 26 2 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;Q9H4A3-4 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 2 KEKPELSEPSHLNGPS(1)S(1)DPEAAFLSR;KEKPELSEPSHLNGPS(1)S(1)DPEAAFLSR;KEKPELS(0.005)EPS(0.024)HLNGPS(0.975)S(0.995)DPEAAFLS(0.001)R;KEKPELSEPSHLNGPS(1)S(1)DPEAAFLSR 145.86 7.7858e-07 3653780000.0 1483300.0 1793450.0 1683970.0 1638720.0 1367650.0 1329070.0 1150390.0 1210910.0 1864870.0 1193570.0 True False 1401018.3921147583 1707289.9699766694 1792521.400647264 1794463.4561008653 1475276.274135961 1320774.781136517 1266682.6479244607 1206709.6358385193 1526256.6175470464 1182995.8983834097 1.184296914325131 1.443191791543588 1.515238897359479 1.5168805391067202 1.2470679536184013 1.1164660696976085 1.0707413691420324 1.0200454942299588 1.2901622225678975 1.0 20.17401364097975 -6.019535592995812 3.3364101570947793 1.1007113474250314 1.4232717584378825 0.6267478262365108 0.11417663698025675 0.16137972763354722 3.7305024526890747 0.03917700111214508 0.04189491225230748 9.56014340791847e-07 6.019535592995812 0.32256041101285104 KEKPELSEPSHLNGPS(ph)SDPEAAFLSR ddPTM_KYSE-520_SHP099_60min_R1 1 KEKPELSEPSHLNGPSSDPEAAFLSR 26 2 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;Q9H4A3-4 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 1 KEKPELSEPSHLNGPS(0.835)S(0.165)DPEAAFLSR 138.16 1.3102000000000002e-06 538240000.0 118120.0 134450.0 122030.0 184500.0 108490.0 117700.0 122160.0 66826.0 141220.0 73231.0 True False 111567.64813361788 127990.82018643549 129896.24905490357 202034.82452805227 117027.54577633942 116965.3906414019 134509.12496670877 66594.19620330562 115578.00786649706 72582.23031285581 1.5371206926643166 1.7633905659105336 1.7896425680914392 2.783530123794883 1.612344306201506 1.6114879652669603 1.8531963593144702 0.9174999985018428 1.5923733311626525 1.0 16.14732876830194 -7.038861579764712 1.3190475909135844 1.161802740039187 1.913360987987648 0.37262194606963495 0.3828585831425117 0.5075590919813315 1.6612599029331818 0.29143213555600167 0.13188037177825254 9.144046380726933e-08 7.038861579764712 0.751558247948461 KEKPELSEPSHLNGPSS(ph)DPEAAFLSR ddPTM_KYSE-520_SHP099_60min_R1 3 KEKPELSEPSHLNGPSSDPEAAFLSR 26 2 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;Q9H4A3-4 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 1 KEKPELSEPSHLNGPS(0.201)S(0.799)DPEAAFLSR;KEKPELSEPSHLNGPS(0.25)S(0.75)DPEAAFLSR;KEKPELSEPSHLNGPS(0.001)S(0.999)DPEAAFLSR 185.38 2.3179e-15 4282220000.0 2014780.0 2879500.0 2426220.0 4168040.0 2487500.0 1896550.0 1875390.0 1716520.0 3079530.0 1856620.0 True False 1903016.1370356465 2741164.497782383 2582618.0232892567 4564169.268433078 2683252.098061058 1884712.9279605001 2064972.7232425974 1710565.7927587817 2520364.980633859 1840171.791228503 1.0341513472311128 1.4896242355461689 1.4034657174942862 2.480295204061371 1.4581530435643255 1.0242048796445582 1.1221630138477543 0.9295685331730925 1.3696357006707822 1.0 20.81140902625009 -6.146386126467057 5.016652634986058 1.0890505138767927 1.6211050714637345 0.317724027438406 0.35676280162820806 0.2859157576423299 10.693366719259098 0.12426712749710056 0.12454741924973049 7.138613575314543e-07 6.146386126467057 0.5320545575869418 KEKT(ph)PAT(ph)TPEAR ddPTM_KYSE-520_SHP099_60min_R1 1 KEKTPATTPEAR 12 2 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 2 KEKT(0.999)PAT(0.513)T(0.488)PEAR 106.52 0.00019099 0.0 200850.0 178490.0 152360.0 171410.0 165660.0 161220.0 177200.0 177460.0 226890.0 161550.0 True False 189708.4501154516 169915.07248104806 162181.36938461912 187700.75486370435 178696.49952353528 160213.76617847735 195113.1053053434 176844.43267947517 185692.49543145098 160118.79268399798 1.184798154766569 1.061181324395716 1.0128815404241258 1.1722593689183047 1.1160245248426355 1.0005931439582285 1.2185521888764697 1.1044576949095914 1.159717059557924 1.0 17.28878311721235 -6.762715131761046 24.999989709136234 1.1293865144687576 1.0911618723808234 0.029903516956440557 0.07577917761248715 115.95244554905108 2272188.8213311443 0.029593866993943455 0.021211464450503714 1.7269702979891817e-07 6.762715131761046 -0.03822464208793419 KEKT(ph)PATT(ph)PEAR ddPTM_KYSE-520_SHP099_60min_R1 1 KEKTPATTPEAR 12 2 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 2 KEKT(1)PAT(0.441)T(0.559)PEAR 116.35 0.00011633 575780000.0 642200.0 636420.0 558730.0 617450.0 583850.0 574800.0 546240.0 572260.0 767420.0 521260.0 True False 606575.8858060387 605845.4279141052 594746.6297996078 676132.2623568882 629795.6733479191 571212.4599887661 601459.2699886622 570274.9636264876 628075.8730838916 516642.041934144 1.1740738007600213 1.1726599439062528 1.151177375292698 1.30870546234616 1.2190174670844902 1.1056251981552407 1.1641702013583515 1.1038106025819328 1.2156886627587926 1.0 18.978805522503592 -6.257572602451105 24.823970013027893 1.1272415492148502 1.2060802758697857 0.3056155147254348 0.06499866770642264 445.50497904726853 2860060.565708333 0.021617334694450614 0.020869777678760075 5.526210167310084e-07 6.257572602451105 0.07883872665493552 KEKT(ph)PATTPEAR ddPTM_KYSE-520_SHP099_60min_R1 6 KEKTPATTPEAR 12 2 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 KEKT(0.603)PAT(0.332)T(0.065)PEAR;KEKT(0.999)PATT(0.001)PEAR;KEKT(0.993)PAT(0.005)T(0.001)PEAR;KEKT(0.997)PAT(0.003)TPEAR;KEKT(0.992)PAT(0.008)TPEAR;KEKT(0.734)PAT(0.207)T(0.059)PEAR 107.82 0.00032463 4331860000.0 3592790.0 3531440.0 2987440.0 2883250.0 3253060.0 3045780.0 3186610.0 3313420.0 4015040.0 3069450.0 True False 3393490.7766507026 3361784.3216004916 3180015.162473004 3157273.213119276 3509057.3146205037 3026770.1572452737 3508743.6371165994 3301926.5193780395 3286009.9469218203 3042257.0609959606 1.1154516888654231 1.1050296717858306 1.0452815454825322 1.0378061911986036 1.1534387937197272 0.9949094033015025 1.1533356868823972 1.0853542133934828 1.080122383164446 1.0 21.536710630655936 -11.604515260724346 1.4481631913957345 0.3625304217357062 1.0849223549621523 0.22569627560398786 0.04756899232703365 572132.8048518106 31606.74809497378 1188137.332523913 0.012278393133923888 2.4859062101458146e-12 11.604515260724346 0.7223919332264461 KEKT(ph)PELPEPSVK ddPTM_KYSE-520_SHP099_60min_R1 7 KEKTPELPEPSVK 13 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 KEKT(1)PELPEPSVK;KEKT(1)PELPEPSVK;KEKT(1)PELPEPSVK;KEKT(1)PELPEPSVK;KEKT(1)PELPEPSVK;KEKT(0.997)PELPEPS(0.003)VK;KEKT(1)PELPEPSVK 194.05 1.5039e-08 19949600000.0 17789210.0 16594090.0 15654210.0 13236440.0 14370520.0 16831330.0 14190550.0 16545690.0 19489400.0 16346350.0 True False 16802407.059389062 15796885.008163102 16663305.424221583 14494427.277919186 15501398.166925982 16726279.42620516 15625069.280421814 16488296.86318307 15950616.24779284 16201534.056267869 1.0370874141321658 0.975024028792618 1.0285017064649546 0.89463301608231 0.9567858273845972 1.0323886224671597 0.9644191239024653 1.0176997317611576 0.984512712956465 1.0 23.949627086617028 -7.264445431778154 24.978845630103926 1.0008296649306405 0.9828404778908842 0.03255050115999891 0.04110239847742647 1177.0072697987237 9780246.206481196 0.021663958937385236 0.011146683791959648 5.4394447294793873e-08 7.264445431778154 -0.01798918703975627 KELIINEILVMK ddPTM_KYSE-520_SHP099_60min_R1 1 KELIINEILVMK 12 1 Q13177;H7C1X3 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 0 119.56 0.00031866 84702000.0 146800.0 85732.0 63024.0 119310.0 134280.0 95000.0 76403.0 106240.0 90802.0 54499.0 False True 138656.7113614551 81613.30603364445 67086.62788196543 130649.18652814036 144847.07205131184 94407.06976153933 84126.56086142316 105871.47823660228 74314.64573214597 54016.18125958037 2.5669476836047678 1.5109047720616018 1.2419727999573622 2.4187046081671735 2.6815496518577313 1.7477553496026745 1.5574325859346523 1.9599956118302013 1.3757848851813352 1.0 15.721104029899776 -7.967121796518826 0.8995637933032906 0.9952884617141556 1.9908394470690567 0.3377758019765805 0.4494095254051499 0.793112820136562 1.455143728489241 0.45886102090947517 0.1617070784509641 1.0786441774475918e-08 7.967121796518826 0.995550985354901 KELLELEALSMAVESTGTAK ddPTM_KYSE-520_SHP099_60min_R1 2 KELLELEALSMAVESTGTAK 20 1 Q14764 Q14764 MVP Major vault protein 0 ; 118.46 0.00016774 141967000.0 163121.0 127851.0 91045.0 183302.0 128122.0 108714.0 111526.0 146033.0 128819.0 81454.0 False True 154072.3529563484 121708.84605173646 96913.90637715059 200722.96696824432 138204.47248553924 108035.47560058931 122800.13646886987 145526.44560735836 105428.71686272672 80732.38093025316 1.9084331612795562 1.5075592302533967 1.2004341413004662 2.486275824587091 1.7118840159679887 1.3381926106443462 1.5210766120592945 1.802578394573579 1.3059037234862352 1.0 16.30085981931802 -6.173155890549064 6.714868675681634 1.4524138270800377 1.7602330198612965 0.20069660624564867 0.3597207070376796 0.5310777034353857 34.225429578362366 0.12169869298686921 0.12173555592888155 6.711878859472318e-07 6.173155890549064 0.3078191927812588 KELS(ph)EES(ph)EDEELQLEEFPMLK ddPTM_KYSE-520_SHP099_60min_R1 14 KELSEESEDEELQLEEFPMLK 21 1 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed 2 KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK;KELS(1)EES(1)EDEELQLEEFPMLK 264.85 1.0375999999999998e-35 6183566000.0 3818800.0 3500838.0 2938433.0 3592292.0 3375720.0 3472984.0 3404028.0 3702790.0 3871195.0 3683048.0 True False 3606963.5514109307 3332652.487615032 3127849.0928390343 3933702.351618032 3641369.9587805704 3451307.818617998 3748140.3703517984 3689945.885727687 3168283.5728844614 3650419.060087986 0.9880957479232514 0.9129506592962796 0.8568465815438855 1.077602951022072 0.9975210787697352 0.9454552372775556 1.0267698882389293 1.0108280241224548 0.8679232495592154 1.0 21.799630661044898 -5.248246181133621 24.991732397787022 0.9899531501335522 0.9186629722564922 0.22698761387818267 0.05931113556506222 1196.548660007698 2266605.571972006 0.016102142929019538 0.027670477500229506 5.6461682933483045e-06 5.248246181133621 -0.07129017787706005 KELS(ph)EESEDEELQLEEFPMLK ddPTM_KYSE-520_SHP099_60min_R1 5 KELSEESEDEELQLEEFPMLK 21 1 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed 1 KELS(0.5)EES(0.5)EDEELQLEEFPMLK;KELS(0.5)EES(0.5)EDEELQLEEFPMLK;KELS(0.704)EES(0.296)EDEELQLEEFPMLK;KELS(0.5)EES(0.5)EDEELQLEEFPMLK;KELS(0.741)EES(0.259)EDEELQLEEFPMLK 210.56 4.640600000000001e-19 1111150000.0 1085850.0 1070505.0 904920.0 933000.0 904743.0 1067831.0 974944.0 1114160.0 1216420.0 1149990.0 True False 1025615.7359116898 1019076.3329392369 963252.5911231919 1021672.0394833206 975941.1268165038 1061166.270637203 1073500.8540565057 1110295.2390068974 995548.7914527995 1139801.9832786815 0.8998192238282207 0.8940819088661586 0.8451052070925171 0.896359240001008 0.8562374352158731 0.9310093210969154 0.9418310108292159 0.974112394341597 0.8734401291258219 1.0 20.120351777437275 -6.394762432451258 4.847661374397042 0.9441058490703991 0.8785405338002938 0.4836474554196376 0.034184992390105834 0.20461686863824807 7.200202927312091 0.011751945082675538 0.010256421720728718 4.029373886582956e-07 6.394762432451258 -0.06556531527010523 KELS(ph)PAGSISK ddPTM_KYSE-520_SHP099_60min_R1 5 KELSPAGSISK 11 1 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;O95453-4 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 1 KELS(1)PAGSISK;KELS(1)PAGSISK;KELS(1)PAGSISK;KELS(1)PAGSISK;KELS(0.999)PAGS(0.001)ISK 157.97 2.6966e-05 5450040000.0 6227140.0 5579910.0 5057770.0 4951510.0 5335670.0 5507910.0 5217360.0 5492890.0 6594430.0 5330770.0 True False 5881708.130704175 5311842.747984335 5383801.946918132 5422100.02167424 5755556.873190525 5473533.090634524 5744781.665326682 5473836.446640159 5397047.744052286 5283543.525076301 1.1132127714646272 1.0053561067063652 1.0189756025224346 1.0262241611033076 1.0893365117319456 1.0359587395573655 1.0872971213469318 1.03601615481366 1.0214825937247003 1.0 22.333074398786284 -7.854703007904249 2.43331569097503 1.0016751038224 1.0505654642130289 0.21719045168271522 0.03277654172023188 0.4390384962859431 5.197869783769762 0.03095480637189199 0.008609314701479022 1.3973235935430162e-08 7.854703007904249 0.04889036039062877 KELSDIAHR ddPTM_KYSE-520_SHP099_60min_R1 4 KELSDIAHR 9 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;;; 169.37 0.00018003 4750780000.0 10672300.0 11652000.0 8345000.0 10518300.0 11646400.0 10425200.0 8223500.0 9355900.0 9562900.0 8246200.0 False True 10080286.244297393 11092220.429991437 8882932.052472087 11517956.069557786 12562905.421048565 10360132.45976842 9054811.633625805 9323446.566583464 7826518.421091382 8173145.083446525 1.2333423842816023 1.3571544756322826 1.0868437990245796 1.4092440488895361 1.5370956091912327 1.2675821062752586 1.1078735959263666 1.140741595969794 0.9575895620576732 1.0 22.962459913688836 -6.828976734943471 2.5525343533374865 1.0447183461019267 1.3245262524677828 0.556755985691731 0.1172974747218274 0.2404989914423812 3.1857198514647638 0.05996871272206978 0.03821426774869182 1.4825975054295246e-07 6.828976734943471 0.27980790636585606 KELSEES(ph)EDEELQLEEFPMLK ddPTM_KYSE-520_SHP099_60min_R1 2 KELSEESEDEELQLEEFPMLK 21 1 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed 1 KELS(0.356)EES(0.644)EDEELQLEEFPMLK;KELS(0.422)EES(0.578)EDEELQLEEFPMLK 167.27 2.6079999999999997e-09 198456000.0 192074.0 204863.0 166360.0 186636.0 190944.0 215680.0 190873.0 216682.0 223394.0 229109.0 True False 181419.2723299738 195021.07397436773 177083.8317854111 204373.8293258407 205970.20647725437 214333.8611175664 210168.30558096393 215930.3807159588 182831.2809044628 227079.27250410506 0.7989248438634758 0.8588237571125837 0.7798326541767913 0.9000109392289254 0.90704098267503 0.9438724140429495 0.9255283552009996 0.9509030847897194 0.8051429744701055 1.0 17.792836499194646 -5.397341181783193 4.9041192760350665 0.9195457014330957 0.8176546082200519 0.4908182817910134 0.04988815849560345 0.19489895253339495 6.937687704394998 0.013604174868335815 0.020415709716375803 4.0055192036723395e-06 5.397341181783193 -0.10189109321304379 KEMQPTHPIR ddPTM_KYSE-520_SHP099_60min_R1 1 KEMQPTHPIR 10 1 P31946-2;P31946;P27348;P63104;E7EX29;B0AZS6;B7Z2E6;H0YB80;P63104-2 P31946-2;P27348;P63104 YWHAB;YWHAQ;YWHAZ 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein theta;14-3-3 protein zeta/delta 0 62.408 0.017697 185580000.0 140020.0 102900.0 108270.0 80194.0 116130.0 83841.0 79767.0 96467.0 106510.0 93327.0 False True 132252.81147705007 97956.52954395117 115249.2574381249 87815.61364879474 125268.77031068572 83317.71721976004 87830.62681089922 96132.37849256712 87170.46889860202 92500.19538730725 1.4297571040071297 1.0589872716895108 1.245935286466857 0.949355980072283 1.354254115747251 0.9007301754434217 0.9495182841846324 1.0392667614381956 0.9423814569646134 1.0 16.49716879257301 -6.2786211044748566 24.88025231219675 0.9677796858481088 1.1871748881916129 0.45067483497418215 0.13222218107685588 773.1608298090308 1119583.2792945628 0.04416399322873092 0.03904748210913262 5.264763847147562e-07 6.2786211044748566 0.21939520234350407 KENNS(ph)PEHLKDEVSIIQSMGYR ddPTM_KYSE-520_SHP099_60min_R1 1 KENNSPEHLKDEVSIIQSMGYR 22 2 P38398;P38398-4;P38398-8;P38398-7;E7EUM2;P38398-5;Q5YLB2;H0Y8B8;B7ZA85;P38398-3;P38398-6;A0A0U1RRA9;E7EWN5;E9PH68;Q3B891;A0A494C182;H0Y8D8;H0Y881;E7EQW4 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 KENNS(1)PEHLKDEVSIIQSMGYR 72.316 0.009051 373220000.0 208370.0 190820.0 180590.0 185380.0 178500.0 132030.0 170300.0 172940.0 235210.0 139540.0 True False 196811.30072470306 181652.7207733406 192231.12035421605 202998.4594634705 192546.93447392917 131205.95179595824 187515.58596783318 172340.11150449945 192501.79316158275 138303.78416047714 1.423036267007259 1.3134327587346755 1.389919455357532 1.4677722717111386 1.3922029367650015 0.9486794059352482 1.3558239718896947 1.2460983085215454 1.3918765443049512 1.0 17.077481105363873 -6.064604774766976 24.99983136815729 1.2094575961384009 1.3966155269907448 0.3715266186455113 0.13440447463391506 248.73967551689668 96252.92686776647 0.04338240514469671 0.043382440995333414 8.617776473400832e-07 6.064604774766976 0.1871579308523439 KENPLQFK ddPTM_KYSE-520_SHP099_60min_R1 2 KENPLQFK 8 1 E7EQR4;P15311;A0A2R8Y7M3;A0A2R8Y5S7;P35241;P35241-5;A0A2R8Y5P0;E9PNV3;E9PQ82;P35241-3 E7EQR4;A0A2R8Y7M3 EZR;RDX Ezrin;Radixin 0 ; 145.72 0.0012453 2237800000.0 3586300.0 3092100.0 2436300.0 2363900.0 3383400.0 3211300.0 2610800.0 3056400.0 3149200.0 2751000.0 False True 3387360.789888193 2943550.874663279 2593347.796217823 2588564.345267547 3649654.331087349 3191257.085528751 2874725.1429525465 3045798.0617691195 2577384.664871636 2726628.2802456156 1.242325847798754 1.0795570837393804 0.9511189387297829 0.9493645921674252 1.3385228773313342 1.1704041613040415 1.0543150174814406 1.1170565800391217 0.9452644071598436 1.0 21.378686601150562 -7.756610211652429 24.91662715556706 0.9726321808124289 1.108375944275089 0.1938856458998507 0.11406074237782358 192.67800530105617 994186.3880628552 0.08827011221219376 0.030951024184650063 1.7514179174917976e-08 7.756610211652429 0.13574376346266004 KENPS(ph)PLFSIK ddPTM_KYSE-520_SHP099_60min_R1 2 KENPSPLFSIK 11 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 KENPS(1)PLFSIK;KENPS(1)PLFSIK 134.85 7.6031e-05 2217400000.0 2987200.0 2566200.0 2238600.0 2305800.0 2550700.0 2540200.0 2641900.0 2873300.0 3175800.0 2649400.0 True False 2821494.0611644317 2442915.900055269 2382903.73788664 2524942.5387359518 2751425.5785022476 2524345.6695606536 2908969.034459296 2863333.1929332605 2599154.775403065 2625928.3772020116 1.0744748735952958 0.9303056097281118 0.9074519162726288 0.9615428054539467 1.0477915553180304 0.9613155071085386 1.10778689156742 1.090407955446298 0.989804138592891 1.0 21.324396136253895 -6.010361385168586 1.6020920000828793 1.0448872292624276 0.9627095952307371 0.18256840216054138 0.05971404294840909 0.5450885074784346 2.8437630743562696 0.024074857328767085 0.026512035622761956 9.764243804571767e-07 6.010361385168586 -0.08217763403169054 KENQWCEEK ddPTM_KYSE-520_SHP099_60min_R1 2 KENQWCEEK 9 1 E5RJR5;P63208 E5RJR5 SKP1 S-phase kinase-associated protein 1 0 ; 175.49 0.00012928 6700400000.0 5142300.0 4857300.0 3287700.0 2964500.0 5052800.0 4700700.0 3448600.0 4021400.0 4064800.0 3833700.0 False True 4857046.368079098 4623948.017044055 3499630.4025059897 3246245.188690573 5450426.613500661 4671361.187663875 3797218.1430926 4007450.7020018175 3326734.7852693424 3799736.4005734697 1.2782587674624102 1.2169128406765777 0.9210192585932574 0.8543343133488518 1.434422296419842 1.2293908564180547 0.9993372546894334 1.0546654503183428 0.8755172555567959 1.0 21.857467907149818 -6.8493481849935876 7.603132021351899 0.9850116236980577 1.146577749998237 0.21264264649651077 0.16292578952024642 0.46688916798281666 34.80748296493592 0.0745163022664915 0.05019369925655714 1.414659156762568e-07 6.8493481849935876 0.1615661263001793 KEPAITSQNS(ph)PEAR ddPTM_KYSE-520_SHP099_60min_R1 6 KEPAITSQNSPEAR 14 1 E5RIS7;A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193 E5RIS7 TCEA1 Transcription elongation factor A protein 1 1 KEPAITSQNS(1)PEAR;KEPAITSQNS(1)PEAR;KEPAITSQNS(1)PEAR;KEPAITSQNS(1)PEAR;KEPAITSQNS(1)PEAR;KEPAITSQNS(1)PEAR 213.94 9.1379e-14 7503350000.0 6743010.0 5560680.0 5499080.0 5301190.0 6321470.0 6009710.0 5487410.0 6005480.0 6543430.0 5942420.0 True False 6368961.793442818 5293536.586049156 5853559.4956390895 5805013.503739113 6818933.72475579 5972201.170701261 6042130.954760703 5984648.39156957 5355308.058446912 5889774.781932806 1.081359140077808 0.8987672333902068 0.9938511594017468 0.9856087403454369 1.1577579750032596 1.013994828634416 1.0258679115023648 1.0161081897270154 0.9092551509566379 1.0 22.48978103747144 -3.878421308493517 20.022751138952245 1.0052043540784994 21.78617665789555 0.11260217968098929 0.06706029721258008 1626.5315443059005 267805.7207983371 0.016651609234605316 393.3444840457381 0.0001323057416212085 3.878421308493517 20.780972303817048 KEPAVLELEGK ddPTM_KYSE-520_SHP099_60min_R1 3 KEPAVLELEGK 11 1 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 0 ;; 135.58 0.00097344 0.0 1940820.0 1779650.0 1259850.0 1242180.0 1738600.0 1796320.0 1327250.0 1603970.0 1591350.0 1512020.0 False True 1833158.8456712489 1694152.942690891 1341061.946831271 1360236.4137249638 1875417.9287191755 1785108.5005689287 1461421.3827117218 1598406.202439411 1302400.9546689563 1498624.6791337589 1.2232274506054837 1.130471802766622 0.8948617792724708 0.907656488421913 1.2514260273647784 1.1911644892974567 0.9751750408624383 1.0665820633377854 0.8690641311350721 1.0 20.515207684196948 -7.383734836906086 1.9011038693597782 0.9477055969363717 1.0848940787368841 0.16876388727670277 0.12313814701942653 0.7502675823959242 4.922184083849973 0.10672915868759267 0.03853302536315389 4.1329976952001074e-08 7.383734836906086 0.13718848180051246 KEPAVLELEGKK ddPTM_KYSE-520_SHP099_60min_R1 1 KEPAVLELEGKK 12 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 0 146.47 1.6575e-05 460990000.0 1258200.0 1038400.0 838360.0 718480.0 1151100.0 1020200.0 648440.0 859030.0 1062900.0 888630.0 False True 1188405.1378404829 988513.7053298227 892402.0270234274 786764.1231811121 1241685.0211369176 1013832.5533760249 713990.6433645432 856050.2254291088 869904.1535285333 880757.4295436782 1.3492990214754106 1.122345009161005 1.0132211175167518 0.893281279033588 1.409792275928046 1.1510916846892716 0.810655260364324 0.9719477766683499 0.9876773381057166 1.0 19.748385213922152 -6.736626747576346 24.746607158124316 0.9402324296979646 1.1479878597060735 0.3357697495319366 0.14710260146237175 258.11739235001863 257430.25436755718 0.05877368251748812 0.045504707631013 1.833889873605194e-07 6.736626747576346 0.20775543000810892 KEPEKPIDR ddPTM_KYSE-520_SHP099_60min_R1 1 KEPEKPIDR 9 2 U3KQ12;O00422;O00422-2 U3KQ12 SAP18 Histone deacetylase complex subunit SAP18 0 117.25 0.00054043 3382000000.0 5838800.0 5223800.0 3565400.0 3424600.0 5491200.0 4992100.0 3603100.0 4556900.0 4693900.0 3858200.0 False True 5514910.12464077 4972840.806916339 3795231.3888417045 3750072.954356464 5923326.199345871 4960942.452174533 3967336.510867291 4541093.177488459 3841606.0835897867 3824019.3496341803 1.4421763125148273 1.300422501102684 0.992471805668235 0.980662651384128 1.5489791389032899 1.297311022406075 1.0374781475012205 1.1875183575948371 1.0045990180351176 1.0 21.866658392734532 -7.332103166242767 1.290132980153152 1.0133560095349716 1.2415959536923278 0.21859630364156435 0.17492234890266828 0.8660765441308095 2.529784786656545 0.1632900207188679 0.06022404222710303 4.6547550712286155e-08 7.332103166242767 0.22823994415735616 KEPFFHGHDNYDQLVR ddPTM_KYSE-520_SHP099_60min_R1 4 KEPFFHGHDNYDQLVR 16 1 P68400;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8Y5A0;A0A2R8YDP2;P68400-2;A0A2R8YF43 P68400 CSNK2A1 Casein kinase II subunit alpha 0 ;;; 280.7 1.9222e-30 2504430000.0 2997920.0 2639100.0 2047930.0 1776680.0 2433630.0 2316990.0 1907830.0 1884150.0 2002180.0 1631640.0 False True 2831619.401394647 2512313.6746301386 2179942.8446038547 1945535.1330216806 2625142.835539426 2302528.805966197 2100692.0750264865 1877614.323413917 1638634.5828504649 1617184.9389967097 1.7509558326404921 1.5535104328814493 1.3479861158961053 1.2030381226705444 1.6232792998728065 1.4237881830600463 1.2989807314986135 1.1610387149528958 1.0132635688946388 1.0 20.625053242147374 -1.000000000020183 0.11196998162392588 0.7764210325565344 3.5009705972184557 0.6701239880954293 0.13791171701412375 71.9971831379385 0.5622969477548807 1.3300931414864001 30.360438198314302 0.0999999999953527 1.000000000020183 2.7245495646619213 KEPGDTVHKEEK ddPTM_KYSE-520_SHP099_60min_R1 1 KEPGDTVHKEEK 12 2 Q9NWT1 Q9NWT1 PAK1IP1 p21-activated protein kinase-interacting protein 1 0 133.16 7.3002e-05 689080000.0 985760.0 864270.0 726370.0 602290.0 1015100.0 927280.0 672680.0 913190.0 879340.0 680690.0 False True 931077.9277361577 822749.1719042825 773192.9724330928 659531.4605149085 1094982.594871065 921492.5015629499 740681.0591241447 910022.3570301486 719674.0223574943 674659.6161688059 1.3800706392113347 1.2195026235250805 1.1460489910806118 0.9775766100544069 1.6230148783606617 1.3658628432450657 1.0978588926520536 1.3488614632040654 1.0667216550537175 1.0 19.363800281898904 -7.898276025803286 5.2435988065446315 1.0026948396762139 1.2630030634524292 0.24095766850962264 0.16914226135654475 0.2953556822574867 11.594299368189454 0.16725763516925923 0.04361764450444827 1.2639327707160001e-08 7.898276025803286 0.2603082237762153 KEPKEPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KEPKEPSPK 9 2 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 KEPKEPS(1)PK;KEPKEPS(1)PK 80.318 0.0080876 1342990000.0 1319060.0 1374560.0 1233910.0 1033400.0 1176920.0 1267030.0 1013890.0 1073520.0 1704870.0 1058800.0 True False 1245889.1123190802 1308524.0743433768 1313449.8129258042 1131614.0252969617 1269536.908241212 1259121.995789084 1116383.8958128365 1069796.2096814527 1395308.5842752778 1049419.8557339348 1.1872170185380573 1.2469023405586621 1.2515961135566795 1.07832343662446 1.2097511794774776 1.1998267317979125 1.0638105327558043 1.0194167795055367 1.3295999467243147 1.0 20.001160561442386 -13.999999921535128 0.0633248828753895 0.44048063874759863 1.3995627671589765 0.23613072942984148 0.09198860817521569 524.7851759091088 2.4113450241924337 45.49593063345591 6.86829049236112 1.0000001806720607e-14 13.999999921535128 0.959082128411378 KEPPLT(ph)PVPLKR ddPTM_KYSE-520_SHP099_60min_R1 2 KEPPLTPVPLKR 12 2 A0A087WU64;A6NMQ1;P09884 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit 1 KEPPLT(1)PVPLKR;KEPPLT(1)PVPLKR 83.54 0.0042536 2386300000.0 3445100.0 3077800.0 2641200.0 2628100.0 2756500.0 3133200.0 2925400.0 3025500.0 3558500.0 3027800.0 True False 3253993.435363414 2929937.868128015 2811455.9780694195 2877873.833832925 2973420.8676604256 3113644.5365984747 3221127.981152665 3015005.2466570097 2912366.1024849825 3000976.0475927577 1.0843116985134271 0.9763283084109499 0.9368471902082116 0.9589792748067485 0.9908179274025077 1.0375439481085142 1.0733601102003139 1.0046748787200437 0.9704729582300885 1.0 21.517000373379652 -6.121782843817129 6.009299266090913 1.0208349354998654 0.9833924083817642 0.08207453667154407 0.04390276536689546 0.5197279833140359 23.4667412077653 0.015409251253034755 0.01545910339651665 7.554698837362986e-07 6.121782843817129 -0.03744252711810114 KEPVDEDLYPEHYRK ddPTM_KYSE-520_SHP099_60min_R1 2 KEPVDEDLYPEHYRK 15 2 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 0 ; 125.52 0.00011795 946730000.0 1633650.0 1646910.0 1252220.0 888370.0 1251050.0 1293310.0 923960.0 1057690.0 1333530.0 917930.0 False True 1543028.1778994622 1567789.9715376904 1332940.1048228412 972800.4177018207 1349500.5174992091 1285237.9725610157 1017362.8937806175 1054021.1202567017 1091394.5675556564 909797.8543387336 1.696012109218457 1.723228917348023 1.4650947993185357 1.0692489689469307 1.4832970984307978 1.412663226706731 1.1182296033442123 1.1585223192494707 1.1996011667327051 1.0 19.79518650662791 -1.0000000000002298 0.22717013614329837 1.0409859811178457 5.087246840650502 0.6877389282947736 0.1374765977909568 30.564892734943104 0.39729965919779253 0.21702349914397098 45.821256599542956 0.09999999999994709 1.0000000000002298 4.046260859532656 KEPVVGGTLS(ph)PLALANK ddPTM_KYSE-520_SHP099_60min_R1 2 KEPVVGGTLSPLALANK 17 1 J3KTM2;J3KRL7;O15534-4;O15534 J3KTM2 PER1 Period circadian protein homolog 1 1 KEPVVGGTLS(1)PLALANK;KEPVVGGT(0.001)LS(0.999)PLALANK 199.04 8.739299999999999e-13 1739520000.0 1791210.0 1914300.0 1518080.0 1278810.0 1375170.0 1858050.0 1413850.0 1691400.0 2089710.0 1913490.0 True False 1691848.010611391 1822334.15457712 1615937.8658138798 1400347.7179117524 1483388.0553530157 1846453.2207413476 1556775.7558462752 1685532.9281757295 1710271.3413022065 1896537.967272693 0.892071785435619 0.9608740695013444 0.8520461460297951 0.7383705162125045 0.7821557390101683 0.973591487544344 0.8208513526807949 0.8887419905437494 0.9017859757174562 1.0 20.854936822921918 -8.3120380521667 0.9794993116671952 1.0002107418553168 0.8586018707782577 0.2710582679481085 0.0684613790920125 1.5923260386724891 2.804048877276855 0.07136933962712833 0.023334248475816187 4.8748577553194504e-09 8.3120380521667 -0.1416088710770591 KEQEFR ddPTM_KYSE-520_SHP099_60min_R1 1 KEQEFR 6 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7;Q9Y2W1;A0A3B3ITZ9 Q9NYF8-3;Q9NYF8;Q9NYF8-4;Q9Y2W1 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 0 97.602 0.031705000000000004 13219000000.0 797260.0 773480.0 520170.0 497660.0 831830.0 845760.0 586630.0 606890.0 682330.0 697130.0 False True 753034.3985015921 736320.8597828494 553700.9905014267 544957.4567730656 897290.2885347246 840481.2981212564 645932.2853570756 604784.8402391904 558436.0721395478 690953.9705589337 1.089847414716265 1.0656583378299673 0.8013572742819919 0.7887029816649479 1.298625272836741 1.2164070747597926 0.9348412671173469 0.8752896227659877 0.8082102367655719 1.0 19.39823007990097 -6.98710298547889 24.88402580163701 0.8860629984631687 1.036974479754343 0.16350252961455947 0.15510914459266645 434.08520076976015 837539.4828870444 0.07214556328698318 0.04860910160435402 1.0301418110344778e-07 6.98710298547889 0.15091148129117427 KEQES(ph)DEEEEEEEEDEPSGATTR ddPTM_KYSE-520_SHP099_60min_R1 4 KEQESDEEEEEEEEDEPSGATTR 23 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 KEQES(1)DEEEEEEEEDEPSGATTR;KEQES(1)DEEEEEEEEDEPSGATTR;KEQES(1)DEEEEEEEEDEPSGATTR;KEQES(1)DEEEEEEEEDEPSGATTR 248.9 8.414700000000001e-29 1732560000.0 1211635.0 1096114.0 1029870.0 1163296.0 1188855.0 1137641.0 1125664.0 1183643.0 1273937.0 1217092.0 True False 1144423.1912155093 1043455.0381393426 1096257.0680502616 1273855.3020823055 1282411.1248403527 1130540.5605324986 1239457.1025419543 1179537.2186973519 1042622.1541383778 1206309.5117632474 0.9486978093563404 0.8649977704429582 0.9087693144754172 1.0559937475916337 1.0630863077303174 0.9371894605058712 1.0274785123183314 0.9778064478437521 0.864307330723431 1.0 20.202168687006733 -5.137674970660894 8.421202048918538 0.9908847421855963 0.9020546454107188 0.29509115474605596 0.05788511372834687 0.3678114741715618 23.582012713352164 0.016137630342181988 0.028061722337740614 7.283246844251791e-06 5.137674970660894 -0.08883009677487752 KEQSEVS(ph)VS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 KEQSEVSVSPR 11 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 2 KEQS(0.011)EVS(0.989)VS(1)PR 81.311 0.0059847 599240000.0 1011900.0 890200.0 890540.0 902590.0 896760.0 923380.0 889750.0 968670.0 1168700.0 862170.0 True False 955767.8898273613 847433.4557825576 947945.6333143793 988371.8822264208 967329.9101335602 917616.8429095804 979694.613123191 965309.909859277 956493.5405294927 854531.8445581108 1.1184695993647855 0.9916932425388736 1.1093157491451637 1.1566238151575503 1.1319998386178092 1.0738240461759405 1.1464694023542252 1.1296359708612742 1.1193187786045675 1.0 19.704774730094844 -4.963758488407157 24.96453261829096 1.1162109573773984 1.0539370687483434 0.1348842056912024 0.05131113830562619 247.27864907971292 170332.5278034636 0.012441303692255738 0.025898490512501288 1.0870299540044762e-05 4.963758488407157 -0.06227388862905503 KEQSEVSVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 KEQSEVSVSPR 11 1 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 KEQS(0.002)EVS(0.024)VS(0.974)PR;KEQSEVSVS(1)PR;KEQS(0.001)EVS(0.004)VS(0.996)PR;KEQS(0.005)EVS(0.049)VS(0.946)PR;KEQSEVSVS(1)PR;KEQSEVS(0.002)VS(0.998)PR;KEQSEVS(0.004)VS(0.996)PR 170.95 1.2698e-05 7687780000.0 8751440.0 7807540.0 7470270.0 6596630.0 7418430.0 7379630.0 7340140.0 7420820.0 8838050.0 7121250.0 True False 8265980.17763688 7432454.059043538 7951815.557054607 7223571.731850873 8002218.235907169 7333570.991835241 8082152.9840630125 7395078.907452399 7233282.909109845 7058161.265248662 1.1711237342131864 1.0530297877490746 1.126612903590899 1.0234353481574048 1.133753953073676 1.0390200388226574 1.1450791049300677 1.0477344777970112 1.0248112273551195 1.0 22.750860962592366 KEQT(ph)PEHGKK ddPTM_KYSE-520_SHP099_60min_R1 3 KEQTPEHGKK 10 2 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KEQT(1)PEHGKK;KEQT(1)PEHGKK;KEQT(1)PEHGKK 87.18 0.0032321 1733940000.0 1285530.0 2079530.0 814300.0 451640.0 1493330.0 2158180.0 1966620.0 575910.0 750910.0 10067800.0 True False 1214219.0882594797 1979626.257361832 866791.0809260673 494563.7298094829 1610846.5751145799 2144709.998083778 2165425.1419615974 573912.3026284045 614563.6729006602 9978607.124629887 0.12168222208713482 0.19838703264262023 0.086864937170098 0.049562401208157254 0.1614300027043431 0.2149307985871151 0.2170067540405259 0.05751426982347411 0.061588121991871164 1.0 23.250407018691188 -10.42679287935916 3.2190495335541787 1.01237554199684 0.13213517025179028 0.946085271969933 0.06231202593896758 45157649.44652552 58818230.90711154 5111106.010371235 0.016793319656987413 3.742890489893716e-11 10.42679287935916 -0.8802403717450498 KEREEEFK ddPTM_KYSE-520_SHP099_60min_R1 3 KEREEEFK 8 2 Q9NYF8-3;E9PK91;H0YF63;Q9NYF8;Q9NYF8-2;H0YF14;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 0 ;; 157.96 0.00016845 2774570000.0 2499710.0 2399820.0 1880210.0 1386860.0 2251820.0 2208540.0 1619400.0 1833040.0 2199710.0 1543920.0 False True 2361046.1032516537 2284529.044996739 2001411.3450423668 1518666.757425338 2429025.4228968234 2194755.6826436818 1783104.7558209542 1826681.6120747523 1800298.1141765474 1530242.0699515855 1.5429232731304752 1.4929200352392729 1.3079050591686374 0.9924356330586221 1.5873471724468233 1.4342539169068331 1.165243585204378 1.1937206850760191 1.1764792966602375 1.0 20.545328461127422 -1.000000110995347 0.05990930303232402 0.5349462453178904 2.8763748927445487 0.4117848558820484 0.1581209652653902 383.48939808436864 1.7204832873717795 13.652316446633368 78.43690640481024 0.09999997444238015 1.000000110995347 2.3414286474266586 KERPISLGIFPLPAGDGLLT(ph)PDAQK ddPTM_KYSE-520_SHP099_60min_R1 2 KERPISLGIFPLPAGDGLLTPDAQK 25 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3;D6RHI8 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 KERPIS(0.001)LGIFPLPAGDGLLT(0.999)PDAQK;KERPISLGIFPLPAGDGLLT(1)PDAQK 271.47 4.208899999999999e-38 978510000.0 773350.0 726140.0 690390.0 585570.0 609930.0 915500.0 667400.0 868420.0 1217170.0 706790.0 True False 730450.7338649963 691255.1444416392 734893.6440630563 641222.3967419604 657928.0209730165 909786.0249125189 734867.3051963111 865407.6537107517 996162.610358759 700528.3904742992 1.042713962485429 0.9867624979104965 1.049056189664904 0.9153410560674278 0.939188232653298 1.2987139954406985 1.0490185910934493 1.2353641415229717 1.4220160437527705 1.0 19.4180839947096 -6.2541326076193275 24.955478076483857 1.206232566924802 0.9861303029520233 0.4548378148746097 0.1172981450161456 511.25878383701183 1746149.4940356857 0.0385784031589963 0.03782076418352803 5.5701564362421e-07 6.2541326076193275 -0.22010226397277866 KES(ph)APPSLR ddPTM_KYSE-520_SHP099_60min_R1 5 KESAPPSLR 9 1 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;H0YI41;F8VWY3;C9JEB6 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 KES(0.998)APPS(0.002)LR;KES(0.992)APPS(0.008)LR;KES(0.999)APPS(0.001)LR;KES(0.918)APPS(0.082)LR;KES(0.991)APPS(0.009)LR 127.52 0.00026678 7506400000.0 3474120.0 3091660.0 2888670.0 3038440.0 3083360.0 2971410.0 3072760.0 3287280.0 3534130.0 2984770.0 True False 3281403.638113477 2943132.0129237273 3074878.2902354165 3327212.4240597016 3326002.8900814224 2952864.3280014265 3383384.5680476697 3275877.1929369234 2892421.0801672773 2958327.2599159232 1.1092091407786762 0.9948635679364872 1.0393976122583564 1.1246938326066949 1.1242849752112782 0.9981533713363909 1.1436816385702462 1.1073410427993098 0.9777218089960341 1.0 21.496350226271698 -7.768477179508575 24.986500922011327 0.9888608487437579 1.0783316859557432 0.3432677826215822 0.05048390501535714 209.60741289359038 744141.9512840477 0.046271252240377224 0.012966631340854523 1.7042088665321864e-08 7.768477179508575 0.08947083721198534 KES(ph)APQVLLPEEEK ddPTM_KYSE-520_SHP099_60min_R1 9 KESAPQVLLPEEEK 14 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5 B1ALK7 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 KES(1)APQVLLPEEEK;KES(1)APQVLLPEEEK;KES(1)APQVLLPEEEK;KES(1)APQVLLPEEEK;KES(1)APQVLLPEEEK;KES(1)APQVLLPEEEK;KES(1)APQVLLPEEEK;KES(1)APQVLLPEEEK;KES(1)APQVLLPEEEK 195.92 6.7117e-11 6515110000.0 11312120.0 10345710.0 9841370.0 8749270.0 8959330.0 10928570.0 9863550.0 9985250.0 11278960.0 10552330.0 True False 10684614.153447863 9848686.562372686 10475760.456948739 9580797.990236059 9664378.29938547 10860360.74088278 10860653.892971348 9950613.498324864 9230985.183443593 10458844.565788502 1.021586475087111 0.941661050646868 1.0016173766665937 0.9160474591596298 0.9240388112276017 1.0383901082541815 1.0384181373626287 0.9514065761024796 0.8826008576165947 1.0 23.318220143781033 -10.069405546572453 0.0016407075316059996 0.6376126949193573 1.299812046781861 0.00041523477376326223 0.05262455417135865 7327933.3295983635 2229.182302752673 454370.6936000069 445366.4601662625 8.523038562784712e-11 10.069405546572453 0.6621993518625037 KES(ph)DGEESRLPQPK ddPTM_KYSE-520_SHP099_60min_R1 5 KESDGEESRLPQPK 14 2 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 KES(0.997)DGEES(0.003)RLPQPK;KES(0.749)DGEES(0.251)RLPQPK;KES(1)DGEESRLPQPK;KES(0.942)DGEES(0.058)RLPQPK;KES(0.999)DGEES(0.001)RLPQPK 157.11 3.9885e-07 5261960000.0 4168010.0 3526390.0 3309920.0 3892410.0 4070760.0 4039080.0 3919950.0 3932460.0 4551290.0 3785100.0 True False 3936802.176578061 3356976.931180697 3523282.7392592467 4262343.476104265 4391105.652543925 4013870.6034993525 4316216.801025288 3918819.2141030673 3724890.464684245 3751566.958763241 1.0493754262821118 0.8948199427279778 0.9391496348023997 1.1361501801661589 1.1704724188080378 1.0699184227868836 1.1505103996459636 1.0445819725939167 0.9928892395171883 1.0 21.839061877321267 -5.252933585037548 24.905489240686354 1.0887104633636535 0.9544854852630522 0.39580096195780157 0.06701176359897687 556.8569033260787 1630508.02842447 0.018578049752418762 0.03149574130159907 5.585556059377056e-06 5.252933585037548 -0.1342249781006013 KES(ph)DIRPSK ddPTM_KYSE-520_SHP099_60min_R1 5 KESDIRPSK 9 2 A0A2R8YFA9;O94851-5;O94851-3;O94851;O94851-2;O94851-6;O94851-4 A0A2R8YFA9;O94851-2 MICAL2 Protein-methionine sulfoxide oxidase MICAL2 1 KES(1)DIRPSK;KES(1)DIRPSK;KES(0.957)DIRPS(0.043)K;KES(0.998)DIRPS(0.002)K;KES(1)DIRPSK 76.72800000000001 0.011434 12252870000.0 4871260.0 4491100.0 4110510.0 4770740.0 4711070.0 4448490.0 4520200.0 4764680.0 5226710.0 4050080.0 True False 4601041.49718394 4275340.814721468 4375480.051648534 5224149.695224723 5081804.406678388 4420725.323826419 4977145.9289007615 4748152.4371646745 4277671.218636872 4014199.4421145585 1.1461915541396845 1.065054409072746 1.090000662583836 1.3014175729327488 1.2659571304213644 1.1012719690623332 1.23988506317936 1.1828391951206818 1.0656349492150605 1.0 21.936680866892065 -10.634705758288073 4.002481795661055 0.9942948732863703 1.1653289270461022 0.2668408582684556 0.0804046828744106 0.004468921862218534 0.0004078645883172451 0.08499475400348934 0.01998152566777921 2.3189652552608405e-11 10.634705758288073 0.1710340537597319 KES(ph)ES(ph)EDS(ph)S(ph)DDEPLIKK ddPTM_KYSE-520_SHP099_60min_R1 2 KESESEDSSDDEPLIKK 17 2 A0A494C198;B4DFG0;H0Y993;A0A494C028;P35659;P35659-2 A0A494C198 DEK Protein DEK 4 KES(1)ES(1)EDS(1)S(1)DDEPLIKK;KES(1)ES(1)EDS(1)S(1)DDEPLIKK 62.19 0.01958 0.0 911840.0 863410.0 744220.0 736360.0 730120.0 674840.0 670060.0 781360.0 938970.0 684970.0 True False 861258.4174920244 821930.4875951682 792193.6119941026 806343.4330052926 787576.2901854621 670628.0732408117 737796.2039554089 778649.6445307945 768476.7175074688 678901.6986985963 1.268605483154619 1.2106767285613622 1.1668752832886975 1.187717506895317 1.1600741192652586 0.9878132202737973 1.0867496802110068 1.1469254621448253 1.1319410733256097 1.0 19.372843169574196 KES(ph)KEEETSIDVAGKPNEVTK ddPTM_KYSE-520_SHP099_60min_R1 3 KESKEEETSIDVAGKPNEVTK 21 3 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 KES(0.995)KEEET(0.005)SIDVAGKPNEVTK;KES(0.611)KEEET(0.382)S(0.007)IDVAGKPNEVTK;KES(0.995)KEEET(0.004)S(0.001)IDVAGKPNEVTK 180.42 8.9505e-10 1872260000.0 746809.0 877250.0 747417.0 1286520.0 1216420.0 1089300.0 1077760.0 1600230.0 1968160.0 893510.0 True False 705382.0160431678 835105.5932209052 795596.6957294826 1408790.4739936595 1312145.3335169577 1082501.2746446803 1186710.4987239682 1594679.1756264896 1610791.7572760575 885594.1965402619 0.7965070444215574 0.9429890083781038 0.8983761398139563 1.5907855759413974 1.4816552983783058 1.2223445895125244 1.340016119527514 1.8006883760715684 1.818882467352332 1.0 19.756286242344423 -5.254109556421376 24.073571250920686 1.483659240181073 0.8856604570122923 0.5622972347311419 0.23634798923676936 256.28440107072765 841718.730319665 0.06669950804429897 0.1124310383324004 5.57045209320201e-06 5.254109556421376 -0.5979987831687807 KES(ph)KEETPEVTK ddPTM_KYSE-520_SHP099_60min_R1 13 KESKEETPEVTK 12 2 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KES(1)KEETPEVTK;KES(1)KEETPEVTK;KES(0.999)KEET(0.001)PEVTK;KES(1)KEETPEVTK;KES(0.999)KEET(0.001)PEVTK;KES(1)KEETPEVTK;KES(0.998)KEET(0.002)PEVTK;KES(0.823)KEET(0.041)PEVT(0.136)K;KES(1)KEETPEVTK;KES(1)KEETPEVTK;KES(1)KEETPEVTK;KES(0.998)KEET(0.002)PEVTK;KES(1)KEETPEVTK 216.71 5.8145e-11 72974970000.0 57390110.0 51951800.0 48094620.0 47887650.0 51011150.0 47459570.0 47045930.0 49780700.0 58523680.0 48979230.0 True False 54206566.193952076 49455957.54675842 51194876.15931283 52438877.85805299 55025437.291259155 47163357.21939643 51801791.72843017 49608022.37060268 47897254.97391547 48545312.12746432 1.1166179352523913 1.0187586685384378 1.0545791944831173 1.0802047728185458 1.1334861159565752 0.9715326805513307 1.0670812372658227 1.0218910991930186 0.9866504689093922 1.0 25.532828649928128 -6.975590082746552 0.9226023684661987 0.9966284109562584 1.07122211984125 0.3308777032327005 0.042368333725427774 0.761609361791413 1.208595433369127 0.035348655984214876 0.01731799242174721 1.0578154777785886e-07 6.975590082746552 0.0745937088849915 KES(ph)PPKPK ddPTM_KYSE-520_SHP099_60min_R1 1 KESPPKPK 8 2 Q68EM7-2 Q68EM7-2 ARHGAP17 Rho GTPase-activating protein 17 1 KES(1)PPKPK 105.98 0.0010595000000000001 2271400000.0 2454900.0 2013600.0 1713400.0 1971000.0 2145200.0 1949700.0 2077300.0 2037200.0 2292500.0 1913800.0 True False 2318721.8032781784 1916863.6335247823 1823848.5055369306 2158323.2473972444 2314015.035481641 1937531.1990955079 2287293.7564943014 2030133.4286860556 1876239.7892220935 1896845.220913871 1.222409597637626 1.0105535298242556 0.9615167781893287 1.1378488996363116 1.2199282313434008 1.0214492873393408 1.2058410097331602 1.0702683625962737 0.989136998915573 1.0 20.855170531610653 -7.649237409744584 4.456366148194594 0.9953576165990798 1.1054995940101564 0.21866424938419093 0.08657624814590077 0.35558282768681826 11.770481079410693 0.06716328427819442 0.022845012061775846 2.2426556271661873e-08 7.649237409744584 0.11014197741107656 KES(ph)PPKPKDPVSAAVPAPGR ddPTM_KYSE-520_SHP099_60min_R1 2 KESPPKPKDPVSAAVPAPGR 20 3 Q68EM7-2 Q68EM7-2 ARHGAP17 Rho GTPase-activating protein 17 1 KES(1)PPKPKDPVSAAVPAPGR;KES(0.738)PPKPKDPVS(0.262)AAVPAPGR 166.91 2.1294e-06 555150000.0 799320.0 776020.0 781350.0 586000.0 615940.0 607320.0 560060.0 555850.0 889930.0 533710.0 True False 754980.1261950833 738738.8343702332 831717.0712042014 641693.263812675 664410.9737807944 603529.4906060853 616676.3304588646 553921.8860863651 728341.1453096702 528981.7446200962 1.4272328560927834 1.3965299216531193 1.572298249727925 1.213072606642647 1.2560187199994222 1.1409268783737099 1.1657799852842725 1.047147452100035 1.3768738764940742 1.0 19.012858409629608 -5.379929583452214 5.342168884949246 1.1715435088860378 1.4571994435060074 0.6162294090994938 0.10657702320348378 0.14815465187859636 5.889235271943942 0.02906451582624025 0.04355309662630666 4.169369801909578e-06 5.379929583452214 0.28565593461996963 KES(ph)PTSSSFGK ddPTM_KYSE-520_SHP099_60min_R1 2 KESPTSSSFGK 11 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 KES(0.829)PT(0.058)S(0.087)S(0.01)S(0.015)FGK;KES(0.602)PT(0.185)S(0.185)S(0.023)S(0.006)FGK 127.79 0.00017848 1976150000.0 2087570.0 2034700.0 1927500.0 1841730.0 2114150.0 1979340.0 1873420.0 2151520.0 2545100.0 2044640.0 True False 1971768.3306323763 1936949.9578530346 2051749.734109042 2016767.4654636835 2280521.5771319713 1966986.204861107 2062803.5764172494 2144056.879288544 2082973.9967499045 2026526.080305849 0.9729794991509764 0.9557981891655225 1.0124467452199708 0.9951845599536066 1.1253354197088787 0.9706197339262685 1.0179013221018727 1.0579961936462998 1.0278545225707316 1.0 20.9505773115413 -4.993434017775551 2.053788096380047 1.0319364211842397 0.9636550943375982 0.2749013910657022 0.039977651000128935 0.4140868312445362 3.4208040386041096 0.01145407511472381 0.0303972148337495 1.0152335989784879e-05 4.993434017775551 -0.06828132684664145 KES(ph)YSVYVYK ddPTM_KYSE-520_SHP099_60min_R1 2 KESYSVYVYK 10 1 P62807;O60814;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;P57053;Q5QNW6-2;Q99880 P62807;Q99880 HIST1H2BC;HIST1H2BK;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;H2BFS;HIST1H2BL Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-L 1 KES(0.995)YS(0.005)VYVYK;KES(0.96)YS(0.04)VYVYK 146.96 3.0613e-05 0.0 1635160.0 1640480.0 1428310.0 1545590.0 1541220.0 1538060.0 1556390.0 1533810.0 1944370.0 1568960.0 True False 1544454.415189354 1561668.8783893194 1520381.147976801 1692482.4089014237 1662505.245657753 1528460.3970256122 1713725.0901026162 1528489.571103947 1591321.4215789589 1555060.2350324078 0.9931798012680629 1.0042497667987593 0.9776992001503504 1.0883709651711029 1.0690937934138005 0.982894657449561 1.1020313242508588 0.9829134181880054 1.023318187765116 1.0 20.56853903334531 -5.220177133414439 24.9360062212754 1.0367833869595264 0.9929636002150459 0.20400131890394257 0.039576839720797695 795.4300718873782 480701.76082696964 0.010571359403348565 0.01831003402765262 6.023138733658474e-06 5.220177133414439 -0.043819786744480504 KESAPPS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 KESAPPSLR 9 1 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;H0YI41;F8VWY3;C9JEB6 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 KES(0.325)APPS(0.675)LR 84.053 0.0039723 2516900000.0 614410.0 566340.0 641670.0 587300.0 649090.0 646570.0 618500.0 578310.0 751990.0 647300.0 True False 580327.4525040302 539132.1763063291 683033.0749083004 643116.8154218167 700169.690183096 642534.5167970362 681024.015978301 576303.9775885686 615447.5721252443 641565.4255917796 0.9045491377106808 0.8403385762395688 1.0646351060428032 1.0024181319132122 1.0913457338154715 1.0015105103339423 1.061503611030979 0.8982777977117238 0.9592904286535637 1.0 19.291236870482606 -4.755826101939772 24.999998852206154 1.0104285644815556 0.8724438215172685 0.5051381826533519 0.054407240404633586 110.74260245278109 493202.5744048321 0.014582267368485209 0.03635588893265326 1.754582922665849e-05 4.755826101939772 -0.1379847429642871 KESETSREDEYK ddPTM_KYSE-520_SHP099_60min_R1 1 KESETSREDEYK 12 2 O14974-5;O14974-4;O14974-3;O14974-2;O14974;H0YHI8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 0 175.88 8.5425e-07 646510000.0 545510.0 562310.0 310470.0 277510.0 425830.0 458120.0 317280.0 439730.0 436930.0 406900.0 False True 515249.4728527754 535295.7835554818 330483.3929695635 303884.4669635762 459340.39835872897 455260.70314901404 349353.75875439815 438204.6792637533 357594.52610896796 403295.18256340997 1.2775988782652095 1.3273051767022221 0.8194578245863418 0.7535038356571406 1.1389682253060562 1.1288523216550783 0.8662482813056399 1.086560658816832 0.8866818686899229 1.0 18.6214766470207 -4.748467520386229 24.99975909550722 0.9648197285796434 1.3024522503115705 0.5455274454734211 0.12495386679423603 180.6392219961988 348127.37873301416 0.0334773416828304 0.08737512869166496 1.7845654459788083e-05 4.748467520386229 0.33763252173192715 KESKEEET(ph)SIDVAGKPNEVTK ddPTM_KYSE-520_SHP099_60min_R1 1 KESKEEETSIDVAGKPNEVTK 21 3 P53985 P53985 SLC16A1 Monocarboxylate transporter 1 1 KES(0.273)KEEET(0.455)S(0.273)IDVAGKPNEVTK 196.41 1.4761e-13 710790000.0 289330.0 365920.0 305640.0 499890.0 428440.0 450840.0 424420.0 601130.0 782990.0 400320.0 True False 273280.2881349442 348340.6539428819 325342.0434412904 547399.3953025911 462155.79050986026 448026.14032939303 467324.5155400334 599044.8203347967 640818.753571651 396773.4762442472 0.6887564428997198 0.8779333166122454 0.8199692341355378 1.3796269863704829 1.164784992395421 1.1291736145527922 1.1778118839081777 1.5097904880265598 1.615074575139124 1.0 18.597956061225446 -4.784695559736225 0.647685535164844 1.3411379324579507 0.49154362000329616 0.553375530724264 0.19092856491943266 1.4576075199612553 0.7207931490191071 0.10073107244165286 0.8358007080420887 1.6417402291832576e-05 4.784695559736225 -0.8495943124546546 KESLS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 5 KESLSPGK 8 1 Q0ZGT2-4;Q0ZGT2-2;Q0ZGT2;E7ETM8;E7EUA0;H7BXY5 Q0ZGT2-4 NEXN Nexilin 1 KES(0.085)LS(0.915)PGK;KES(0.097)LS(0.903)PGK;KES(0.002)LS(0.998)PGK;KES(0.001)LS(0.999)PGK;KES(0.178)LS(0.822)PGK 121.08 0.00060999 97689700000.0 17676500.0 15728300.0 14761000.0 15486800.0 16782500.0 15779100.0 15435320.0 16372900.0 18510500.0 15395100.0 True False 16695949.307770863 14972688.8593404 15712517.678435043 16958660.81572381 18103187.270637043 15680616.78394006 16995672.779806316 16316106.231363568 15149459.811731974 15258711.391206555 1.0941913035587378 0.9812551319352572 1.029740800228387 1.1114084525838086 1.1864165201440098 1.0276501325647096 1.1138340810090133 1.0692977809886606 0.9928400520415149 1.0 23.863129794928305 -7.739554467896695 6.10406205342566 0.9956977589950942 1.0766731738093902 0.264858096769519 0.05357679295519306 0.22116935079593808 27.417809659992795 0.043576934904119326 0.014586507339082046 1.8215686031558193e-08 7.739554467896695 0.08097541481429604 KESLS(ph)PGKLK ddPTM_KYSE-520_SHP099_60min_R1 2 KESLSPGKLK 10 2 Q0ZGT2-4;Q0ZGT2-2;Q0ZGT2;E7ETM8;E7EUA0;H7BXY5 Q0ZGT2-4 NEXN Nexilin 1 KES(0.013)LS(0.987)PGKLK;KESLS(1)PGKLK 128.73 0.00028969 2910700000.0 3147000.0 3346600.0 3849600.0 2218650.0 2789100.0 2311700.0 1908490.0 2266900.0 4121700.0 2413800.0 True False 2972429.6366110286 3185824.3126509907 4097751.375577783 2429509.8289385545 3008586.302191793 2297271.8228184273 2101418.7942674677 2259036.6529984353 3373303.179601621 2392415.6099079815 1.2424386566869776 1.3316349799161884 1.7128091618393149 1.0155049226718595 1.2575516936655964 0.9602310791254143 0.8783669465976665 0.9442492531994989 1.4099988169410778 1.0 21.190036605293773 -5.291131914655299 24.99889517793726 1.0599210938994972 1.4192283970562005 0.44119860799459665 0.18670097188657503 631.5349475756117 531703.8515276618 0.05348171673321143 0.07933818575358688 5.115264384867484e-06 5.291131914655299 0.35930730315670334 KESPLLFK ddPTM_KYSE-520_SHP099_60min_R1 1 KESPLLFK 8 1 P26038;V9GZ54 P26038 MSN Moesin 0 107.21 0.0385 0.0 505590.0 399720.0 283180.0 246220.0 392380.0 415560.0 285150.0 299140.0 321770.0 350370.0 False True 477543.91483132256 380516.8512080481 301434.2359040202 269620.6747712576 423258.0736631946 412966.33589584456 313975.7447958165 298102.3531598008 263344.67916161136 347265.9943837353 1.3751531176520202 1.0957503969927156 0.8680211733341499 0.7764096661688153 1.2188296018281786 1.189193133144817 0.9041361661483834 0.8584265605643847 0.758337077112741 1.0 18.405681617849222 -6.914223273549087 6.888544939613005 0.8611451843062181 1.069078821551054 0.26041237130468464 0.16949441546579697 0.3429573045793852 22.84618903007903 0.07721159871187687 0.05183102486429407 1.218363069701734e-07 6.914223273549087 0.20793363724483593 KESVS(ph)PEDSEK ddPTM_KYSE-520_SHP099_60min_R1 4 KESVSPEDSEK 11 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 KES(0.011)VS(0.985)PEDS(0.004)EK;KES(0.008)VS(0.989)PEDS(0.003)EK;KES(0.019)VS(0.981)PEDSEK;KESVS(1)PEDSEK 209.84 1.5062e-09 1960670000.0 3281240.0 3779370.0 3055850.0 2946420.0 3072380.0 3212020.0 3122820.0 3137460.0 3556590.0 3504550.0 True False 3099223.0762102264 3597803.3922499768 3252834.9805328785 3226446.8709265273 3314158.8265490737 3191972.591741676 3438505.121386191 3126576.88354867 2910802.910337804 3473502.4134986447 0.8922472787599333 1.0357854879467698 0.936471202061581 0.9288742274621673 0.9541259604915391 0.9189492943310205 0.989924494660937 0.9001222718021554 0.8380022708566169 1.0 21.727959669085394 -7.296174167070428 23.414123083472894 0.9017966475618041 0.9516669252217322 0.08917990527262576 0.05254864567967524 543.714523595855 366504.2363535174 0.02704497900383491 0.012993640161777774 5.0562184953278724e-08 7.296174167070428 0.04987027765992813 KESYSIYVYK ddPTM_KYSE-520_SHP099_60min_R1 4 KESYSIYVYK 10 1 Q16778;P06899;P33778;P23527;Q6DRA6;Q6DN03 Q16778 HIST2H2BE;HIST1H2BJ;HIST1H2BB;HIST1H2BO;HIST2H2BD;HIST2H2BC Histone H2B type 2-E;Histone H2B type 1-J;Histone H2B type 1-B;Histone H2B type 1-O;Putative histone H2B type 2-D;Putative histone H2B type 2-C 0 ;;; 143.79 0.00053175 5428220000.0 13266700.0 12408300.0 9072700.0 8837200.0 12976700.0 11483200.0 10548500.0 10189800.0 10243400.0 7827270.0 False True 12530769.704489203 11812186.642761974 9657540.758833261 9677084.83099894 13997892.462676963 11411529.08932325 11614845.323439145 10154453.962117206 8383456.775100381 7757926.477323916 1.6152215081073664 1.5225958479096813 1.2448610833141867 1.2473803224720732 1.8043342513740235 1.4709509200272337 1.4971584684888206 1.308913405121618 1.0806311196174472 1.0 22.887239672687336 -7.660013312909699 2.1017747119363976 1.0028622225322887 1.4813023361932318 0.5728066630644264 0.15365024836134553 0.24936482099332 2.0272781408666014 0.1487620817873185 0.04479752652367122 2.1876945610976085e-08 7.660013312909699 0.4784401136609431 KESYSVYVYK ddPTM_KYSE-520_SHP099_60min_R1 4 KESYSVYVYK 10 1 P62807;O60814;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;P57053;Q5QNW6-2;Q99880 P62807;Q99880 HIST1H2BC;HIST1H2BK;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;H2BFS;HIST1H2BL Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 1-L 0 ;;; 157.68 0.00017167 19007400000.0 40112500.0 37203000.0 26059200.0 26451300.0 38321600.0 34168700.0 29834800.0 32627100.0 29791000.0 25603100.0 False True 37887379.66271374 35415712.03715854 27739017.728194244 28965223.599126656 41337291.89992219 33955440.46906429 32850792.743588366 32513924.20532238 24381705.36999581 25376276.452910375 1.493023601512998 1.395622880404771 1.0931082729835602 1.1414292263435941 1.628973895229663 1.3380781271071776 1.2945474015680793 1.2812724619254925 0.9608070520212 1.0 24.596977057384915 -7.711051156965094 4.3667976227171446 0.9749267797870903 1.3333203068913668 0.4836734235749729 0.14647562154925864 0.18488733012011407 7.072303892196138 0.125217952941423 0.040139217485648526 1.9451309448022572e-08 7.711051156965094 0.3583935271042765 KET(ph)ERASPIK ddPTM_KYSE-520_SHP099_60min_R1 2 KETERASPIK 10 2 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KET(0.963)ERAS(0.037)PIK;KET(0.947)ERAS(0.053)PIK 106.32 0.0027164999999999997 5735800000.0 3070100.0 3064700.0 3197100.0 3221600.0 3420900.0 3090400.0 2883900.0 3109700.0 3887800.0 3214500.0 True False 2899795.4329073797 2917467.2117915126 3403190.181540868 3527779.8953906414 3690105.3677415345 3071111.6672743266 3175432.756151694 3098913.1765094395 3181873.5234624487 3186022.0308431536 0.9101617643679549 0.9157084237171548 1.0681627900232198 1.1072678911944136 1.158217153559663 0.9639329664213223 0.9966763335002247 0.9726590546171894 0.9986979037368404 1.0 21.603324812232053 -4.751017353557039 24.748273660835842 1.0355569870758696 0.9129349918689263 0.4011111015203035 0.05872583937498554 200.592285006035 476318.2500545312 0.016890614373829677 0.04364681081297564 1.774118589169176e-05 4.751017353557039 -0.12262199520694328 KET(ph)ERASPIKMDLAPSK ddPTM_KYSE-520_SHP099_60min_R1 1 KETERASPIKMDLAPSK 17 3 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KET(0.566)ERAS(0.434)PIKMDLAPSK 84.762 0.0015180999999999999 3247600000.0 3137800.0 3386100.0 3778600.0 2710900.0 3097800.0 2782400.0 2575100.0 2366200.0 4644000.0 2938100.0 True False 2963739.9789507804 3223426.6733602798 4022174.6019737665 2968543.1209381935 3341579.23592906 2765034.0095211254 2835416.23855412 2357992.204475232 3800766.6657131594 2912070.719807212 1.0177431333628426 1.1069190907471096 1.3812077346253622 1.0193925239338695 1.1474924744101966 0.9495078504495177 0.973676984995005 0.809730405390477 1.3051766359454287 1.0 21.473613961219396 -6.252053360670811 23.801439409922928 0.9936051886466577 1.1403213606848484 0.14978905002636977 0.14903419024180564 609.4004952236932 1545341.5730481048 0.048686605676594275 0.04799569361557243 5.596888297113094e-07 6.252053360670811 0.14671617203819065 KET(ph)ES(ph)EAEDNLDDLEK ddPTM_KYSE-520_SHP099_60min_R1 6 KETESEAEDNLDDLEK 16 1 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KET(1)ES(1)EAEDNLDDLEK;KET(1)ES(1)EAEDNLDDLEK;KET(1)ES(1)EAEDNLDDLEK;KET(1)ES(1)EAEDNLDDLEK;KET(1)ES(1)EAEDNLDDLEK;KET(1)ES(1)EAEDNLDDLEK 258.83 3.5754e-29 39685300000.0 22147300.0 20330200.0 19025200.0 20364200.0 19830800.0 20249000.0 19545100.0 20992600.0 24894400.0 20320700.0 True False 20918745.119452022 19353506.675747667 20251594.833396263 22299607.445280027 21391371.1381826 20122618.48001485 21520909.449793857 20919781.5703097 20374204.496754844 20140674.40726535 1.038631810258846 0.96091651572334 1.0055072846066615 1.1071926885048042 1.0620980561835647 0.9991035093023505 1.0685297331469006 1.0386832708423757 1.011594948846661 1.0 24.263608656778047 -5.023917199859545 24.68237646993653 1.0439508160477853 0.9956335822755599 0.1964074678350487 0.0360620390027025 831.2282207091605 857822.9156616516 0.009657283022681703 0.016856720753233745 9.464175828133435e-06 5.023917199859545 -0.04831723377222541 KET(ph)ESEAEDNLDDLEK ddPTM_KYSE-520_SHP099_60min_R1 6 KETESEAEDNLDDLEK 16 1 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 KET(1)ESEAEDNLDDLEK;KET(1)ESEAEDNLDDLEK;KET(0.997)ES(0.003)EAEDNLDDLEK;KET(0.598)ES(0.402)EAEDNLDDLEK;KET(0.999)ES(0.001)EAEDNLDDLEK;KET(0.996)ES(0.004)EAEDNLDDLEK 324.23 2.7621e-47 32402400000.0 26533800.0 24795600.0 21490000.0 21438900.0 23774500.0 24073100.0 22728400.0 24770300.0 31657900.0 23204700.0 True False 25061917.220181037 23604382.157045614 22875279.785215754 23476446.610159688 25645417.891599055 23922850.85343697 25026008.479807947 24684377.610731464 25909623.390715014 22999124.4109834 1.0896900582968514 1.0263165560238967 0.9946152460609109 1.0207539291777707 1.1150606185404128 1.0401635482267506 1.0881287492778027 1.073274667749667 1.1265482514778555 1.0 24.45507560225174 -5.735605494037467 24.999921553335113 1.0765547375459483 1.0296470647126577 0.1958445380104954 0.04029180047407047 328.5232220937902 317916.4928516744 0.011530205739405833 0.014880016114904629 1.8382073825145904e-06 5.735605494037467 -0.04690767283329067 KET(ph)PPKEVK ddPTM_KYSE-520_SHP099_60min_R1 7 KETPPKEVK 9 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KET(1)PPKEVK;KET(1)PPKEVK;KET(1)PPKEVK;KET(1)PPKEVK;KET(1)PPKEVK;KET(1)PPKEVK;KET(1)PPKEVK 122.33 0.00056861 56855700000.0 47103100.0 42570900.0 39036300.0 37220200.0 37924700.0 40593700.0 38780600.0 43609700.0 53436800.0 41214400.0 True False 44490197.14529809 40525730.0637764 41552642.358288325 40757596.61733885 40909158.127974294 40340339.660831556 42700921.51018288 43458428.12928052 43734024.15210614 40849272.480318 1.089130710142619 0.9920796039464965 1.017218663522324 0.99775575285892 1.001466015035767 0.9875412023621312 1.045328812912324 1.063872756858024 1.0706194136793519 1.0 25.28380704861961 -6.896504502150417 7.610773933786685 1.0512202769262213 1.0120808408406547 0.16858820716214307 0.032320377083326884 0.33138264907701803 21.634982722305704 0.013198239119762019 0.008880364589081235 1.2690989881551775e-07 6.896504502150417 -0.03913943608556658 KET(ph)PPPLVPPAAR ddPTM_KYSE-520_SHP099_60min_R1 7 KETPPPLVPPAAR 13 1 Q9BQA1-2;Q9BQA1 Q9BQA1-2 WDR77 Methylosome protein 50 1 KET(1)PPPLVPPAAR;KET(1)PPPLVPPAAR;KET(1)PPPLVPPAAR;KET(1)PPPLVPPAAR;KET(1)PPPLVPPAAR;KET(1)PPPLVPPAAR;KET(1)PPPLVPPAAR 95.76700000000001 0.0035413000000000003 85275600000.0 12853190.0 13988900.0 10206090.0 9114740.0 9651960.0 13503800.0 10035340.0 12721640.0 14348580.0 13399140.0 True False 12140197.928500978 13316852.246233026 10863990.891721383 9981002.14915349 10411514.339859845 13419517.775219724 11049810.102680173 12677511.600093093 11743239.570266694 13280434.043973193 0.9141416529236357 1.0027422448798924 0.8180448662859465 0.7515569232229257 0.7839739503532797 1.0104728302392834 0.8320368194362366 0.9546006973956012 0.8842511872265127 1.0 23.662798963219764 -6.25518102638912 24.993015387744546 0.9269201323624104 0.8546512792338531 0.19863601917286877 0.08145257635377179 1066.3171835778348 4258387.999750348 0.029346683520300645 0.02863849950109873 5.556725887273627e-07 6.25518102638912 -0.07226885312855735 KET(ph)PSAPAK ddPTM_KYSE-520_SHP099_60min_R1 6 KETPSAPAK 9 1 P49454 P49454 CENPF Centromere protein F 1 KET(0.985)PS(0.015)APAK;KET(0.912)PS(0.088)APAK;KET(0.944)PS(0.056)APAK;KET(0.639)PS(0.361)APAK;KET(0.997)PS(0.003)APAK;KET(0.998)PS(0.002)APAK 105.25 0.0013187000000000001 4128320000.0 7978880.0 7990090.0 6929850.0 5567160.0 5882550.0 7630930.0 6345580.0 7744780.0 8995310.0 7649150.0 True False 7536275.620897063 7606234.083030396 7376559.219152036 6096261.21257231 6345473.217868972 7583302.535320234 6987053.153292793 7717915.165825238 7361988.457311837 7581384.481948643 0.9940500496764166 1.0032777128162964 0.9729831321331482 0.8041092266310425 0.8369807959189527 1.000252995132506 0.921606491522629 1.0180086742997505 0.9710612190742746 1.0 22.854029900946554 -7.0677941199323415 1.8083027038547475 0.9957307622296954 0.9280296861802392 0.1439006180719572 0.06556605283622607 0.8085918770079498 5.099325037440271 0.04779672043139109 0.022664779464547754 8.554721588052687e-08 7.0677941199323415 -0.06770107604945619 KET(ph)SFGSSENITMTSLSK ddPTM_KYSE-520_SHP099_60min_R1 2 KETSFGSSENITMTSLSK 18 1 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 KET(0.357)S(0.357)FGS(0.262)S(0.023)ENITMTSLSK;KET(0.367)S(0.367)FGS(0.256)S(0.009)ENITMTSLSK 108.25 4.8954e-05 550260000.0 877470.0 880810.0 767010.0 628520.0 776110.0 788780.0 708950.0 760650.0 878880.0 759910.0 True False 828794.9899069217 838494.5654772354 816452.6918593914 688254.3518285714 837185.4415381572 783856.9314369147 780617.5846852335 758011.4826870438 719297.546761839 753177.7886010346 1.100397545506938 1.113275747330082 1.0840105805242675 0.9138006487245819 1.1115376133079546 1.040732936233906 1.0364320303910795 1.006417733182211 0.9550169397558506 1.0 19.522630929583283 -1.0000000000001026 0.2656550338373031 0.9912962102917814 1.886353295539312 0.3244713383332929 0.053147427692130406 63.516949127113406 0.8826992796107653 0.06484492692970943 25.92914841169051 0.09999999999997639 1.0000000000001026 0.8950570852475307 KET(ph)SPESSLIQDEIAVK ddPTM_KYSE-520_SHP099_60min_R1 4 KETSPESSLIQDEIAVK 17 1 A0A669KB77;P11137-3;P11137 A0A669KB77 MAP2 Microtubule-associated protein 2 1 KET(0.5)S(0.5)PESSLIQDEIAVK;KET(0.496)S(0.496)PES(0.006)S(0.001)LIQDEIAVK;KET(0.5)S(0.5)PESSLIQDEIAVK;KET(0.497)S(0.497)PES(0.004)S(0.001)LIQDEIAVK 285.55 3.2546999999999997e-37 1176710000.0 1087100.0 1042920.0 918810.0 837570.0 875260.0 1006140.0 833030.0 999340.0 1284420.0 979300.0 True False 1026796.3959198772 992816.5577451646 978037.9627479798 917172.400975396 944137.9824518267 999860.307051317 917240.8019893363 995873.5227877094 1051201.7055933003 970624.1638838705 1.0578722786080643 1.0228640442789856 1.0076381766908045 0.94493052522555 0.9727122171304066 1.030120971901689 0.9450009963888337 1.0260135280403546 1.0830162123586595 1.0 19.888553251169345 -7.515665219546402 24.61369506791861 1.0458437023574436 0.996167787805719 0.18013863955209097 0.03883481014277478 432.28481634744077 1475060.6075147458 0.02457727013242542 0.010119730710556715 3.05024539723019e-08 7.515665219546402 -0.0496759145517246 KET(ph)SPQVK ddPTM_KYSE-520_SHP099_60min_R1 2 KETSPQVK 8 1 Q9GZR2;A0A0C4DG22 Q9GZR2 REXO4 RNA exonuclease 4 1 KET(0.649)S(0.351)PQVK;KET(0.5)S(0.5)PQVK 94.616 0.0042826999999999995 542770000.0 3633000.0 3080300.0 2839650.0 3076300.0 3272900.0 3317000.0 3354700.0 3233400.0 3578400.0 3323400.0 True False 3431470.2477940475 2932317.7643754347 3022698.3826006446 3368670.6270766812 3530458.6097463435 3296297.372621322 3693825.8147169063 3222184.0900812345 2928652.7641231585 3293957.2615660713 1.041747046275457 0.8902112357648807 0.9176495450835145 1.022681947450371 1.0717985478863896 1.0007104254455743 1.1213945784350348 0.9782106549097382 0.8890985922296899 1.0 21.651390405831464 -5.272099893334114 24.134863385464676 1.0176582733462123 0.9439034717411213 0.14574281500232933 0.06748768009801495 731.5635502742431 1656222.0436471615 0.01948124948366408 0.02926768206926706 5.344414168370795e-06 5.272099893334114 -0.07375480160509096 KETERAS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 6 KETERASPIK 10 2 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KET(0.002)ERAS(0.998)PIK;KETERAS(1)PIK;KET(0.007)ERAS(0.993)PIK;KET(0.046)ERAS(0.954)PIK;KET(0.095)ERAS(0.905)PIK;KETERAS(1)PIK 88.552 0.0024264 10730240000.0 18221100.0 16624700.0 16375900.0 16907300.0 17545100.0 15944600.0 15705900.0 17167900.0 20660800.0 16047900.0 True False 17210339.260137673 15826024.457816554 17431516.716366425 18514164.70863488 18925799.552036617 15845083.837050952 17293605.64681262 17108348.561917998 16909319.536383785 15905728.09107728 1.0820214680893638 0.9949889981266914 1.0959269903617348 1.1639935375873092 1.189873198112416 0.9961872695371708 1.0872564618097493 1.0756092688089745 1.063096227947559 1.0 23.92304307754414 -8.400336937346374 0.7153991720458037 0.9993172714303034 1.0902536105353622 0.1741893670118313 0.05756955018122813 2.743931858132031 2.5795985098635903 0.0668555469306155 0.023353522571106244 3.9779842807795304e-09 8.400336937346374 0.09093633910505883 KETERAS(ph)PIKMDLAPSK ddPTM_KYSE-520_SHP099_60min_R1 4 KETERASPIKMDLAPSK 17 3 E7EVA0;P27816-6;P27816;P27816-2 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KET(0.094)ERAS(0.906)PIKMDLAPSK;KET(0.008)ERAS(0.992)PIKMDLAPSK;KETERAS(1)PIKMDLAPSK;KET(0.203)ERAS(0.797)PIKMDLAPSK 126.97 7.816600000000001e-05 5911990000.0 5122020.0 5144860.0 5197610.0 4107470.0 4453530.0 3770660.0 3434430.0 3542850.0 5809160.0 3526070.0 True False 4837891.340106274 4897693.203007695 5532656.25707004 4497842.713844119 4803997.47388054 3747125.912284692 3781615.7012067228 3530560.6802574075 4754362.98100651 3494831.7630409505 1.3842987783471128 1.4014102924216518 1.5830965929690195 1.2869983503670632 1.3746004957046767 1.072190642168198 1.082059440227885 1.0102233582727222 1.360398240420479 1.0 21.736791577008315 -6.116585186602052 2.3011981033424473 1.1019648600585592 1.427138732595114 0.6196611413890427 0.11709555117904126 0.20275591667072504 2.110996335802479 0.04231341276115321 0.04290426361986663 7.645657046254696e-07 6.116585186602052 0.3251738725365547 KETES(ph)EAEDNLDDLEK ddPTM_KYSE-520_SHP099_60min_R1 6 KETESEAEDNLDDLEK 16 1 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 KET(0.173)ES(0.827)EAEDNLDDLEK;KET(0.03)ES(0.97)EAEDNLDDLEK;KET(0.001)ES(0.999)EAEDNLDDLEK;KET(0.02)ES(0.98)EAEDNLDDLEK;KET(0.384)ES(0.616)EAEDNLDDLEK;KET(0.002)ES(0.998)EAEDNLDDLEK 273.73 6.9573e-30 44041500000.0 25721500.0 22779500.0 20846500.0 19908400.0 21268800.0 21435100.0 21266700.0 23155400.0 26959000.0 21222600.0 True False 24294677.120460954 21685138.62727341 22190298.745579325 21800488.35032128 22942533.55708181 21301315.589953385 23416545.57899067 23075079.32191099 22063925.181085497 21034584.274932973 1.1549872725277985 1.0309278445362815 1.0549435375351641 1.0364116573628241 1.0907053477839612 1.012680607875777 1.1132402367892906 1.0970066734054584 1.0489356429724734 1.0 24.326259969343702 -8.880814020180662 0.005799949686847342 2.136792053210113e-05 2.094580677865476 0.16824734589832402 0.04218888667442885 23218.255277330212 43.91126653805695 8082.0818585993475 7774.467650284795 1.3157881772692407e-09 8.880814020180662 2.0945593099449438 KETKPEPMEEDLPENKK ddPTM_KYSE-520_SHP099_60min_R1 1 KETKPEPMEEDLPENKK 17 3 P31948;P31948-2;P31948-3;F5H783 P31948 STIP1 Stress-induced-phosphoprotein 1 0 46.41 0.049852999999999995 608660000.0 625580.0 579140.0 464090.0 433540.0 672970.0 574740.0 430900.0 529160.0 546750.0 488530.0 False True 590877.8303371874 551317.2450931376 494005.9839702545 474743.51125144644 725928.9103244825 571152.8344710215 474459.5771787395 527324.4674668728 447473.98244588 484202.0042705888 1.2203126486997862 1.1386100020871506 1.0202477057368537 0.9804658119220493 1.4992273966689496 1.1795755272252892 0.9798794160166158 1.0890588283731797 0.9241473155815689 1.0 18.88524952557303 -6.757819733389748 24.627129051303903 1.0056929426962602 1.170630395013586 0.2835724846784472 0.13587695930812307 118.81945386748257 808424.9447693689 0.05678559138837042 0.04220814897408789 1.746546957815036e-07 6.757819733389748 0.1649374523173257 KETQS(ph)PEQVK ddPTM_KYSE-520_SHP099_60min_R1 14 KETQSPEQVK 10 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 KET(0.001)QS(0.999)PEQVK;KET(0.018)QS(0.982)PEQVK;KET(0.004)QS(0.996)PEQVK;KET(0.002)QS(0.998)PEQVK;KETQS(1)PEQVK;KET(0.002)QS(0.998)PEQVK;KET(0.003)QS(0.997)PEQVK;KET(0.003)QS(0.997)PEQVK;KET(0.075)QS(0.925)PEQVK;KETQS(1)PEQVK;KET(0.035)QS(0.965)PEQVK;KET(0.001)QS(0.999)PEQVK;KETQS(1)PEQVK;KETQS(1)PEQVK 240.31 1.3494e-13 197162200000.0 70234720.0 60618420.0 59756360.0 57880980.0 59109130.0 58833020.0 59443820.0 60311810.0 70942060.0 56284280.0 True False 66338660.072156854 57706220.11309655 63608350.57915659 63381970.93664879 63760682.24605581 58465821.29917929 65452981.44137636 60102602.407992214 58060770.20779984 55785645.067707166 1.1891707981800959 1.034427764401727 1.1402279296395155 1.1361699028436787 1.1429585903088388 1.0480441918027332 1.1732943369559665 1.0773847346399876 1.040783343767583 1.0 25.733390595334892 -7.76469700522271 2.218485487912781 1.0043292711605314 1.1193136374671508 0.43824059566220863 0.04685576664590767 0.2687279611616665 2.5186784930269686 0.0412517059226206 0.011863362042683448 1.719107340651291e-08 7.76469700522271 0.11498436630661946 KETQS(ph)PEQVKSEK ddPTM_KYSE-520_SHP099_60min_R1 8 KETQSPEQVKSEK 13 2 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 KET(0.018)QS(0.981)PEQVKS(0.001)EK;KETQS(1)PEQVKSEK;KET(0.043)QS(0.947)PEQVKS(0.01)EK;KET(0.005)QS(0.995)PEQVKSEK;KET(0.001)QS(0.999)PEQVKSEK;KET(0.048)QS(0.922)PEQVKS(0.03)EK;KET(0.051)QS(0.949)PEQVKS(0.001)EK;KET(0.035)QS(0.965)PEQVKSEK 201.12 6.989800000000001e-09 30183630000.0 12272050.0 14327530.0 14743620.0 8153130.0 9597790.0 9270700.0 6414480.0 6792260.0 16667090.0 8032090.0 True False 11591294.922774829 13639213.952739028 15694017.335826054 8928001.023872083 10353081.469044985 9212838.122508448 7062918.237691981 6768699.235385404 13640766.599147517 7960931.93147147 1.4560223630290903 1.7132685055150327 1.9713794152395459 1.1214768698847377 1.3004861187314987 1.1572562360554663 0.887197415891797 0.850239556580947 1.7134635387626291 1.0 22.92450589635114 -5.277539950261072 24.17973673211242 1.1368973846748585 1.7135279202012719 0.5064158432363801 0.25610591739088046 407.03180310710997 611276.9640667194 0.07241296816130068 0.10783321935579591 5.277886538636211e-06 5.277539950261072 0.5766305355264134 KETS(ph)PLLR ddPTM_KYSE-520_SHP099_60min_R1 2 KETSPLLR 8 1 Q9H4B6;G3V453 Q9H4B6 SAV1 Protein salvador homolog 1 1 KET(0.173)S(0.827)PLLR;KET(0.036)S(0.964)PLLR 129.82 0.00047699999999999994 0.0 638200.0 597780.0 554900.0 568660.0 609030.0 598580.0 574050.0 652270.0 760860.0 633510.0 True False 602797.7737798414 569061.7515139272 590669.741871391 622705.2754261366 656957.1960933171 594844.0401880234 632080.5761881071 650007.4276109625 622707.0037197485 627897.5942633218 0.9600256145065682 0.9062970725052332 0.9407103121081261 0.9917306279166794 1.0462807981675568 0.9473583680248394 1.006661885573384 1.035212482974363 0.9917333804254128 1.0 19.2601697591978 -5.274833962449849 3.9049726605281427 1.0045865190061778 0.9313876700402756 0.5551873226538615 0.027660278527885156 0.15516480714537323 5.459622468412159 0.007802953729115793 0.012904162465975503 5.310874484327305e-06 5.274833962449849 -0.07319884896590223 KETS(ph)PQVK ddPTM_KYSE-520_SHP099_60min_R1 4 KETSPQVK 8 1 Q9GZR2;A0A0C4DG22 Q9GZR2 REXO4 RNA exonuclease 4 1 KET(0.006)S(0.994)PQVK;KET(0.042)S(0.958)PQVK;KET(0.026)S(0.974)PQVK;KET(0.1)S(0.9)PQVK 144.7 0.00056068 4686310000.0 11795500.0 9231200.0 8652500.0 9580600.0 10438300.0 10342200.0 10250500.0 9520000.0 11468900.0 10609500.0 True False 11141180.101253722 8787719.295686312 9210253.994489482 10491137.343487576 11259734.824197277 10277650.493555708 11286720.575239409 9486977.341984695 9386436.867441338 10515508.084066104 1.0594999321179432 0.8356913641673798 0.875873416753448 0.9976824000910183 1.0707742064559755 0.9773803045360389 1.0733404876880752 0.9021891539753636 0.8926279921428028 1.0 23.326015223520752 -3.919973931430919 19.575015314328137 0.9608561152579137 4.695230629991127 0.13443837104044054 0.07673418515207056 697.8866423363007 176043.1428733629 0.01992937550903768 3573.4836052465184 0.00012023366028245275 3.919973931430919 3.7343745147332137 KETSFGS(ph)SENITMTSLSK ddPTM_KYSE-520_SHP099_60min_R1 2 KETSFGSSENITMTSLSK 18 1 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 KET(0.019)S(0.019)FGS(0.929)S(0.033)ENITMTSLSK;KET(0.072)S(0.072)FGS(0.842)S(0.013)ENITMTSLSK 199.89 5.060100000000001e-13 701720000.0 1252570.0 1046110.0 960110.0 996200.0 973620.0 924430.0 885840.0 865580.0 1129390.0 946500.0 True False 1183087.445163609 995853.305356877 1022000.226830315 1090878.5484815477 1050238.354859983 918660.2894701033 975389.3521652673 862577.5050078904 924321.2456050351 938114.7463658563 1.2611329794641302 1.061547437789133 1.0894192110180774 1.162841275768748 1.1195201428487083 0.9792621777121433 1.039733525076552 0.9194797420565148 0.9852965739913422 1.0 19.839404872538054 -6.23449110551592 4.769976004761113 0.9824777849707172 1.1345659650882458 0.6509444629305885 0.05644128902659425 0.13142621455517092 7.949968276446252 0.019199335330192926 0.018528224563187527 5.827857103040901e-07 6.23449110551592 0.15208818011752856 KETTSGTSTEPVKNS(ph)SPAPPQPAPGK ddPTM_KYSE-520_SHP099_60min_R1 2 KETTSGTSTEPVKNSSPAPPQPAPGK 26 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 KETTSGTSTEPVKNS(0.5)S(0.5)PAPPQPAPGK;KETTSGTSTEPVKNS(0.5)S(0.5)PAPPQPAPGK 195.74 1.2426e-15 12770100000.0 4485800.0 4621000.0 4224500.0 3145800.0 3120700.0 3597900.0 2740500.0 3295500.0 5551100.0 3659200.0 True False 4236963.7317793965 4399000.223737586 4496818.029438983 3444775.8861807403 3366281.335645888 3575444.1715267594 3017536.4847025666 3284068.679675481 4543160.1718433 3626782.334814525 1.168243181044411 1.2129209358693296 1.239891897088153 0.9498159989126855 0.9281729712125226 0.9858447079123123 0.8320147740150732 0.9055047633134093 1.2526696538229494 1.0 21.790258732358662 -5.263594697265152 24.95417093822624 0.9672335700631477 1.2076089063706776 0.4968100515017492 0.1046123884949741 147.04114143783096 1702444.532238613 0.029341370988356503 0.04607735390734052 5.450110438850078e-06 5.263594697265152 0.24037533630752994 KETTSGTSTEPVKNSS(ph)PAPPQPAPGK ddPTM_KYSE-520_SHP099_60min_R1 3 KETTSGTSTEPVKNSSPAPPQPAPGK 26 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 KETTSGTSTEPVKNS(0.172)S(0.828)PAPPQPAPGK;KETTSGTSTEPVKNS(0.021)S(0.979)PAPPQPAPGK;KETTSGTSTEPVKNS(0.023)S(0.977)PAPPQPAPGK 160.41 3.1243e-10 3127770000.0 1141780.0 1283140.0 1095610.0 834310.0 905100.0 1018460.0 778570.0 939470.0 1481350.0 1084050.0 True False 1078443.187317999 1221496.0283675946 1166234.7736379798 913602.5715555525 976326.2206854513 1012103.4133614445 857275.4537109556 936211.1978439456 1212374.1817946136 1074446.160378139 1.003720081179734 1.1368610856571009 1.0854287693927231 0.850300932002047 0.9086785887362141 0.9419768534565253 0.7978766040815366 0.8713430531637405 1.1283712730360844 1.0 20.035161761627773 -5.246833510056997 24.08164727156683 0.9173132105455332 1.0814891258857737 0.3510554481783874 0.09058922239175281 498.9235743301404 822605.0228028881 0.024500166840386948 0.04217841165394129 5.664564025944784e-06 5.246833510056997 0.16417591534024056 KETVSEAPPLLFS(ph)DEEEKEAQLGVK ddPTM_KYSE-520_SHP099_60min_R1 1 KETVSEAPPLLFSDEEEKEAQLGVK 25 2 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 KETVSEAPPLLFS(1)DEEEKEAQLGVK 155.79 1.5557e-07 807120000.0 235220.0 224850.0 171240.0 216150.0 245070.0 233020.0 230040.0 245050.0 287310.0 240610.0 True False 222171.87770055537 214047.86849326902 182278.4043936874 236692.83101213272 264355.6147424416 231565.63574561963 253294.68817404733 244199.97874510003 235141.74649570353 238478.38259174713 0.9316227126585852 0.8975566932609532 0.7643393183596483 0.9925127319289518 1.108509760379388 0.9710131091506039 1.0621285058263095 1.0239920955986512 0.9860086433840185 1.0 17.8634989702644 -5.451131670497094 7.860614535604116 1.0278385843824176 0.8686952312987071 0.6407184955769035 0.05398837618135768 0.1880314441550239 18.681403149777218 0.014970971500763458 0.022185565412269473 3.5389003154415884e-06 5.451131670497094 -0.15914335308371053 KEVDAT(ph)SPAPSTSSTVK ddPTM_KYSE-520_SHP099_60min_R1 1 KEVDATSPAPSTSSTVK 17 1 Q16666-3;Q16666-2;Q16666;H3BM18;X6RHM1;Q16666-6 Q16666-3 IFI16 Gamma-interferon-inducible protein 16 1 KEVDAT(0.5)S(0.5)PAPSTSSTVK 51.645 0.060425 0.0 249310.0 251280.0 200200.0 209360.0 196060.0 251460.0 228560.0 253200.0 263720.0 278190.0 True False 235480.2773128362 239208.13162103042 213105.2123313259 229257.51145362048 211488.80657119615 249890.54486564905 251665.07533063935 252321.70829732443 215835.09584019677 275725.4530285451 0.8540389533368818 0.867559120834107 0.7728891547392388 0.831470250335888 0.7670267806189852 0.9063020556168189 0.912737915801285 0.9151193896894324 0.7827898856252925 1.0 18.072872927360162 -6.28427001478501 24.42377797454968 0.8986690769219672 0.8194928484625926 0.3525735373510468 0.05726657286263779 732.9545503912478 784097.7781113042 0.019693041145885166 0.017380004397386822 5.196727988543802e-07 6.28427001478501 -0.07917622845937455 KEVLAS(ph)PDR ddPTM_KYSE-520_SHP099_60min_R1 6 KEVLASPDR 9 1 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 KEVLAS(1)PDR;KEVLAS(1)PDR;KEVLAS(1)PDR;KEVLAS(1)PDR;KEVLAS(1)PDR;KEVLAS(1)PDR 114.56 0.00056394 10770670000.0 17500600.0 14203600.0 12724920.0 14153800.0 15166800.0 15339700.0 15483300.0 16328300.0 16008600.0 15985500.0 True False 16529806.83141882 13521237.735961739 13545188.703791885 15498972.896504872 16360340.872712547 15243959.242327208 17048503.066445988 16271660.938353859 13101841.783965474 15843880.906530812 1.0432927973224837 0.853404403613531 0.8549160892902564 0.9782308380086491 1.0325968094072742 0.9621354346360734 1.0760307507372535 1.0269997000322513 0.8269338719003451 1.0 23.91742242632263 -5.436431166629256 7.818820274501544 0.9931603284862284 0.9111933117494727 0.1354690492262569 0.07884771023535592 0.5205326767116689 42.205969148563725 0.02220352726529568 0.03294366874761733 3.6607395673982575e-06 5.436431166629256 -0.08196701673675566 KEVLAS(ph)PDRLWGSR ddPTM_KYSE-520_SHP099_60min_R1 4 KEVLASPDRLWGSR 14 2 Q9C0C2;E9PKK0 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 KEVLAS(0.823)PDRLWGS(0.177)R;KEVLAS(0.994)PDRLWGS(0.006)R;KEVLAS(0.934)PDRLWGS(0.066)R;KEVLAS(0.998)PDRLWGS(0.002)R 106.75 0.00039155 27122130000.0 1986350.0 1814400.0 1876610.0 1631160.0 1612260.0 1700680.0 1452990.0 1635550.0 2027280.0 1533460.0 True False 1876163.2058094468 1727233.5005300762 1997579.2832821633 1786184.955973863 1739135.6894954462 1690065.4252847848 1599872.4090158655 1629876.6587902394 1659177.0555699773 1519874.7374138287 1.2344196265817717 1.1364314821556167 1.3143052082576105 1.175218530846285 1.144262514985087 1.1119767857715348 1.0526343846849895 1.0723756495641124 1.0916538150987238 1.0 20.53552099617814 -6.116462369664181 1.3077969337243893 1.0590117060598023 1.2206040339522177 0.6981178232596658 0.04759919045546157 0.2527094126918876 0.8863013179208696 0.021159620113668547 0.021611577712567782 7.647819516682715e-07 6.116462369664181 0.1615923278924154 KEVQDEEK ddPTM_KYSE-520_SHP099_60min_R1 1 KEVQDEEK 8 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 73.84100000000001 0.045146 567280000.0 756200.0 656940.0 502880.0 516450.0 644070.0 729350.0 461780.0 651130.0 744910.0 960980.0 False True 714252.0785526728 625379.6163129571 535296.4494364482 565533.2527236454 694754.644742989 724797.8561113538 508461.228938496 648871.382004884 609653.1216529693 952466.4648311263 0.7498973506424824 0.6565896432099978 0.5620108100408102 0.5937566030987929 0.7294268831461379 0.7609694229390654 0.5338363582476858 0.6812537826409771 0.6400783063381257 1.0 19.861308772424884 -10.214963252153385 4.912756487649024 1.000048104344795 0.6541559113017608 0.6637560009104521 0.07334524953015015 3.9738025454386345e-05 6.34995792845891e-06 0.07302621189255835 0.01770899999022551 6.095884754135497e-11 10.214963252153385 -0.3458921930430343 KEVS(ph)PEVVR ddPTM_KYSE-520_SHP099_60min_R1 12 KEVSPEVVR 9 1 Q5T200-2;Q5T200;A0A087WX14 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR;KEVS(1)PEVVR 177.83 2.5325999999999998e-05 17871130000.0 27952010.0 24762550.0 24321120.0 22216840.0 24479360.0 24142090.0 23477940.0 23427540.0 28658290.0 23961520.0 True False 26401456.284349512 23572919.9286547 25888898.310367856 24328321.79386349 26405746.363494232 23991410.26125641 25851319.297813416 23346275.331768915 23454666.952700377 23749239.574580472 1.1116758581444346 0.9925757772002733 1.0900937787531322 1.0243831899318085 1.1118564988395292 1.0101969869778544 1.0885114538775744 0.9830325412505897 0.9875965451038953 1.0 24.501377984832178 -7.2743875780014555 24.444342922629982 0.988985895337577 1.058345648520634 0.4038306887814964 0.03947346559334829 569.891264360634 1075864.9429815193 0.01943290732551094 0.009431720668414339 5.3163360101750706e-08 7.2743875780014555 0.06935975318305698 KEVVEEAENGR ddPTM_KYSE-520_SHP099_60min_R1 2 KEVVEEAENGR 11 1 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 0 ; 169.62 0.00061855 1173000000.0 1214630.0 2027200.0 1390210.0 965130.0 1736530.0 1459480.0 1363150.0 1646960.0 2123430.0 1140410.0 False True 1147252.052595126 1929810.2691107627 1479825.1610146475 1056855.6650230847 1873185.0314958657 1450370.843953382 1500950.5050619573 1641247.0801633552 1737868.6393142324 1130306.8546255545 1.0149916793835467 1.7073330673112355 1.3092242650380816 0.9350165936781808 1.6572358416037476 1.2831655740368464 1.3279141844708964 1.4520367397993563 1.5375193313234834 1.0 20.10828305661026 KEWLTNFMEDR ddPTM_KYSE-520_SHP099_60min_R1 1 KEWLTNFMEDR 11 1 Q02880;Q02880-2;E9PCY5;P11388;P11388-2;P11388-3;P11388-4 Q02880;P11388 TOP2B;TOP2A DNA topoisomerase 2-beta;DNA topoisomerase 2;DNA topoisomerase 2-alpha 0 121.76 0.00052868 280930000.0 336290.0 335660.0 217470.0 228550.0 400690.0 377890.0 323250.0 267380.0 270730.0 330920.0 False True 317635.3233225053 319534.38976406865 231488.46416430263 250271.32328393674 432222.02338576294 375531.4483388222 355927.26461598394 266452.5211869609 221572.2565479161 327988.3062518641 0.9684349023059111 0.9742249454427083 0.7057826750278752 0.7630495310761229 1.3177970529652272 1.1449537717678553 1.0851827880188671 0.8123842103759348 0.6755492568621317 1.0 18.323284853874124 -7.285850920197692 21.137067347408813 0.8079745707616494 0.9916955354900551 0.14518798832089408 0.18107216248418218 231.24254581350763 200217.97399568057 0.1085968318438991 0.05226019564323535 5.177845407933875e-08 7.285850920197692 0.1837209647284057 KEWSGLLEELAR ddPTM_KYSE-520_SHP099_60min_R1 3 KEWSGLLEELAR 12 1 Q01813-2;Q01813;Q5VSR5;V9GYV7 Q01813-2 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 ;; 162.72 8.323e-06 1629800000.0 2994658.0 2750084.0 2076696.0 1829596.0 3013686.0 2799183.0 2151186.0 2069476.0 2091722.0 2129135.0 False True 2828538.351037277 2617965.836679759 2210563.146991081 2003480.2537519028 3250845.9426722564 2781712.260592785 2368648.874432173 2062297.4707753288 1711918.0128205984 2110272.520341964 1.3403663857495145 1.2405818734044476 1.0475249645163673 0.9493940874647054 1.5404863169736323 1.318176791754847 1.122437434786072 0.9772659459362808 0.8112307753233629 1.0 21.00899788975343 -7.205989070225257 2.751025289565391 0.9075235232844964 1.2300718610666461 0.4335432406440899 0.15814002930358964 0.2930331148718928 4.32797380246561 0.10150156787321431 0.048371875886563935 6.223159466334662e-08 7.205989070225257 0.32254833778214975 KEYEEDDILAS(ph)DDPSSIEQYENTR ddPTM_KYSE-520_SHP099_60min_R1 2 KEYEEDDILASDDPSSIEQYENTR 24 1 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 KEYEEDDILAS(1)DDPSSIEQYENTR;KEYEEDDILAS(1)DDPSSIEQYENTR 250.56 4.8033999999999997e-29 2046650000.0 1413200.0 1257380.0 1204840.0 1100790.0 1093030.0 1149440.0 1081260.0 1135930.0 1358510.0 1205040.0 True False 1334806.9788556423 1196973.5774341414 1282505.914212159 1205408.7506354186 1179045.2425100214 1142265.9185968814 1190564.3128806776 1131989.7239580555 1111838.82925021 1194364.283106933 1.1175878228570029 1.0021846721005594 1.0737979461977385 1.0092471515472274 0.9871738959264071 0.9563798371678306 0.9968184160561379 0.9477759340001185 0.9309042852135134 1.0 20.187811497448646 -4.673330571698665 0.5161185283593482 0.9574141349827484 1.1442447722493112 0.6522298874725596 0.03169954429389793 1.837048071118313 0.5076589186086059 0.020138140214932806 0.19764492103864886 2.1216289280734747e-05 4.673330571698665 0.1868306372665628 KFAETQPK ddPTM_KYSE-520_SHP099_60min_R1 1 KFAETQPK 8 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 96.331 0.0073795 0.0 575100.0 525510.0 439840.0 405360.0 651910.0 662180.0 418560.0 477170.0 569410.0 512440.0 False True 543198.0565665731 500263.7107934082 468192.790168882 443885.2925240723 703211.6081394905 658047.0889968008 460872.12955194473 475514.8086423149 466019.497657995 507900.18027228734 1.0694976644335161 0.9849646253821269 0.921820484328007 0.8739616754735223 1.3845468764403586 1.2956228695253054 0.9074069028777846 0.9362367392494122 0.9175415086644781 1.0 18.95418546045667 KFAYLGR ddPTM_KYSE-520_SHP099_60min_R1 2 KFAYLGR 7 1 M0QYS1;P40429;Q8J015 M0QYS1 RPL13A;RPL13a 60S ribosomal protein L13a 0 ; 151.51 0.0031836 761630000.0 1107430.0 904310.0 700450.0 699350.0 738180.0 892900.0 643040.0 829140.0 733760.0 592470.0 False True 1045998.6502930255 860865.5902030157 745602.1277596251 765816.013732755 796270.5663303367 887327.0798955616 708044.7586656223 826263.90686273 600527.6805843418 587221.1767346846 1.7812686117851357 1.4659988847642798 1.2697126011456827 1.304135552452602 1.3559977021913563 1.5110611044881805 1.2057548104834912 1.4070744373649327 1.0226601225855811 1.0 19.163544470920424 -1.0000000000000004 0.10303999095485102 0.8392583499704538 3.056485981039893 0.5899978033133856 0.14095359788710163 98.6901120526224 0.7189692501822817 1.6913255784022037 30.9785391470987 0.0999999999999999 1.0000000000000004 2.2172276310694397 KFDDENFILK ddPTM_KYSE-520_SHP099_60min_R1 2 KFDDENFILK 10 1 E9PKY5;Q9UNP9-2;Q9UNP9;Q9UNP9-3;E9PEQ6 E9PKY5 PPIE Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase E 0 ; 122.7 0.001174 940410000.0 2327300.0 2024350.0 1334000.0 1192240.0 2073710.0 2050260.0 1457080.0 1759550.0 1840750.0 1847580.0 False True 2198200.0296424716 1927097.1873887018 1419991.7744754683 1305550.1311399732 2236899.1792040956 2037463.56683467 1604375.8661304193 1753446.5317320584 1506516.2015313273 1831211.8785954881 1.2004072578037543 1.0523616682012549 0.7754382718206156 0.7129432407031514 1.221540339133101 1.112631252915077 0.87612792647509 0.9575333975426839 0.8226880893142756 1.0 20.80436729574851 -4.523365078577445 24.987703785446406 0.9381761116117111 1.1633959256535054 0.24450704035112414 0.1451542384425001 21.079047560679808 1083127.640527545 0.03968220079011355 0.10719634788864693 2.9966424089056398e-05 4.523365078577445 0.22521981404179425 KFDDFQK ddPTM_KYSE-520_SHP099_60min_R1 2 KFDDFQK 7 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 85.161 0.021023 2078570000.0 4737700.0 4572700.0 2988500.0 2884700.0 4783400.0 4290200.0 3582100.0 4258600.0 3986900.0 3702900.0 False True 4474890.336629202 4353020.628237366 3181143.4917690665 3158861.020683318 5159826.36617699 4263423.270431115 3944213.625927037 4243827.910564709 3262979.461570153 3670095.1868126057 1.219284544092586 1.1860784003310456 0.8667741107095964 0.8607027501721874 1.405910774390073 1.1616655845195671 1.0746897355957945 1.1563263878859713 0.8890721617506538 1.0 21.807386050311372 -7.759189457439129 24.999852329032368 0.944536052921641 1.1116706134647076 0.16480273409030077 0.1544886610835914 112.11147171572618 1245838.8283458527 0.12383427046496151 0.04166605471554194 1.7410471900100097e-08 7.759189457439129 0.16713456054306663 KFDEGR ddPTM_KYSE-520_SHP099_60min_R1 8 KFDEGR 6 1 H7BZ94;P07237;I3L398;I3L312;I3L3U6;H0Y4J5;Q13087-2;Q13087 H7BZ94 P4HB;PDIA2 Protein disulfide-isomerase;Protein disulfide-isomerase A2 0 ;;;;;;; 138.37 0.016963 34098960000.0 48273300.0 44420700.0 27124600.0 27443300.0 44992800.0 47012600.0 34010600.0 38678400.0 38007300.0 39660100.0 False True 45595483.81856221 42286662.895169914 28873095.116894472 30051502.980871 48533477.38598658 46719176.92496145 37448723.35946909 38544233.65800641 31106132.406063642 39308742.369090855 1.159932398509262 1.075757206835003 0.7345209583605984 0.7644992225571943 1.2346738781485234 1.1885187393249586 0.9526817980550727 0.9805511785671984 0.7913286086334559 1.0 25.228346871603666 -7.543946943675601 23.017836096275285 0.8924225260250954 1.0093912972821089 0.07588409307928123 0.1644507922592925 301.59753688328567 329490.71319556516 0.12056113313826364 0.04558376029986027 2.8579396671115124e-08 7.543946943675601 0.11696877125701344 KFDEVLVNHFCEEFGK ddPTM_KYSE-520_SHP099_60min_R1 2 KFDEVLVNHFCEEFGK 16 1 P34932;A0A087WYC1;A0A087WTS8 P34932 HSPA4 Heat shock 70 kDa protein 4 0 ; 233.14 1.2495999999999998e-22 1379660000.0 2051500.0 1675860.0 1026110.0 1260730.0 1755310.0 1377620.0 1266090.0 1383860.0 1214370.0 1144990.0 False True 1937699.2054361398 1595349.1700828562 1092254.6924340476 1380549.4001477044 1893442.9106522817 1369021.7625778073 1394078.7330476423 1379059.7126553531 993871.0197765047 1134846.2793887395 1.7074552215828207 1.4057843771952592 0.9624692896930208 1.2165078435920922 1.6684576096703987 1.206349958969951 1.2284295753240984 1.2151951658141347 0.875775898310943 1.0 20.114065459806945 -7.422657796186552 1.371321954642085 0.9423469589581563 1.3502302134993835 0.3593986022606912 0.21153913726302945 0.5479155677809442 1.8087687997965394 0.1966833540914877 0.06872631484390927 3.778698174593747e-08 7.422657796186552 0.4078832545412272 KFDGVEGPRT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 KFDGVEGPRTPK 12 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBW1;H0YAN4 Q6PKG0 LARP1 La-related protein 1 1 KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK;KFDGVEGPRT(1)PK 131.4 4.8698999999999996e-05 7774530000.0 7796620.0 7634180.0 7969450.0 7252630.0 8160040.0 9393000.0 10083000.0 10875800.0 15353800.0 11153400.0 True False 7364125.9464233555 7267422.533662193 8483173.498570856 7941917.774617273 8802188.723723482 9334374.802843552 11102288.04059695 10838074.388230791 12565936.957800752 11054589.553213907 0.6661600515310294 0.6574122448127738 0.7673892782481949 0.7184271959069086 0.796247448297564 0.8443890890666098 1.0043148130605335 0.980414002352519 1.1367167362760608 1.0 23.39814212441446 -6.502538194966188 0.9171164897176729 1.0644898911530947 0.6881248781401286 0.9061491285753298 0.047751494475182725 0.15363858111164627 0.26770237611426373 0.03141640624268812 0.022861177213223616 3.1438499154292587e-07 6.502538194966188 -0.3763650130129661 KFDHES(ph)S(ph)PGT(ph)DEDKSG ddPTM_KYSE-520_SHP099_60min_R1 4 KFDHESSPGTDEDKSG 16 2 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 3 KFDHES(1)S(1)PGT(1)DEDKSG;KFDHES(1)S(1)PGT(1)DEDKSG;KFDHES(1)S(1)PGT(1)DEDKSG;KFDHES(1)S(1)PGT(1)DEDKS(0.001)G 103.25 0.0015344000000000002 3977360000.0 6807400.0 6341100.0 5772840.0 6072600.0 6112200.0 6274400.0 5841490.0 6129800.0 7645300.0 5801000.0 True False 6429779.951784544 6036464.037814847 6144966.503270576 6649738.078206227 6593195.366339213 6235239.142229489 6432004.81664849 6108537.154506078 6257106.242329201 5749607.6531097 1.1182989065883424 1.049891471211953 1.0687627528718493 1.1565551041747497 1.1467209180392082 1.084463413578687 1.118685866012042 1.0624267816260904 1.088266647019822 1.0 22.455032080820253 -8.40472682154604 0.869474216188068 1.0000622904715155 1.1046811308357474 0.46976751189942534 0.03274395837233459 1.3108904927525595 1.7152484275475735 0.034996315475187785 0.011696034494699014 3.937977028729831e-09 8.40472682154604 0.10461884036423186 KFDQLLAEEK ddPTM_KYSE-520_SHP099_60min_R1 2 KFDQLLAEEK 10 1 P35579;P35579-2;P35749-4;P35749-3;P35749;P35749-2;Q7Z406;Q7Z406-6;Q7Z406-2;A0A0C4DFM8;A1L2Z2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35580 MYH9;MYH11;MYH14;MYH10 Myosin-9;Myosin-11;Myosin-14;Myosin-10 0 ; 151.26 0.00035895 4576300000.0 12698300.0 11146800.0 7986900.0 7962100.0 13142000.0 11795200.0 9456000.0 9762900.0 9588100.0 10145200.0 False True 11993899.985566534 10611290.9963121 8501748.353491833 8718815.59010735 14176200.632248608 11721581.781592727 10411904.76166665 9729034.778577987 7847142.736331673 10055321.420846174 1.1927913075659022 1.0552910794391237 0.8454974234703674 0.8670847231230173 1.4098207346071743 1.1657093086345454 1.0354621524162546 0.9675508490865597 0.7803970065107398 1.0 23.261455862697108 -7.344061737380824 2.953688647084971 0.8886964215735063 1.0808711465255303 0.19225291497177766 0.16014283394180878 0.4949563432605108 8.28973843911408 0.11397192483405984 0.04784662993375624 4.5283320256465256e-08 7.344061737380824 0.19217472495202403 KFDVNTSAVQVLIEHIGNLDR ddPTM_KYSE-520_SHP099_60min_R1 1 KFDVNTSAVQVLIEHIGNLDR 21 1 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 67.655 0.044295999999999995 4604000.0 11484.0 12270.0 11370.0 11554.0 12687.0 8385.4 9662.1 10799.0 11787.0 7814.7 False True 10846.95962721356 11680.530782354517 12102.92839264322 12652.088686163233 13685.394720844468 8333.063608193803 10638.839361008804 10761.540789505543 9646.777926089784 7745.467837744604 1.400426656522284 1.5080471608743726 1.5625819700217696 1.6334828252088365 1.7668906523830463 1.0758631735046105 1.3735567152140828 1.3893984217535897 1.2454738859129806 1.0 12.91913666722887 -6.263438273929786 24.999986232599458 1.2509894847604157 1.5732444293967964 0.6067386464339374 0.1425598385726683 143.33609770263504 1792681.1965095524 0.050005977684657955 0.04631962594867585 5.452073802505877e-07 6.263438273929786 0.3222549446363807 KFEDEY(ph)S(ph)EY(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 1 KFEDEYSEYLK 11 1 C9K058;B8ZZ77;H7BZ14;Q9H2H8;Q9H2H8-2 C9K058 PPIL3 Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase-like 3 3 KFEDEY(1)S(1)EY(1)LK 61.11 0.046324000000000004 0.0 165620.0 807130.0 486850.0 278840.0 771710.0 386700.0 515690.0 546810.0 1003200.0 266090.0 True False 156432.72844471526 768354.2632731709 518233.12998754135 305340.86976369715 832439.186570732 384286.4618609181 567820.9778493941 544913.2437364128 821044.1686140043 263732.6496148877 0.5931488902611951 2.9133831719172827 1.9649942119198542 1.1577666633599113 3.1563751692719535 1.457106135406699 2.1530173783130286 2.066157696182538 3.1131684674344404 1.0 18.00871665967685 -4.240383240637974 23.644953004156925 2.1219163346630268 0.5931456865909926 0.2791179439679936 0.7306203143048908 3156.288308335434 3544235.16054974 0.1705405186697778 6.786767610473254 5.7493236769737246e-05 4.240383240637974 -1.528770648072034 KFEEFQTDMAAHEER ddPTM_KYSE-520_SHP099_60min_R1 3 KFEEFQTDMAAHEER 15 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ;; 217.37 6.7061e-14 3002570000.0 3322460.0 2876710.0 1879200.0 1872590.0 3113910.0 2695590.0 2325790.0 2585580.0 2447710.0 2270190.0 False True 3138156.52064019 2738508.533570261 2000336.2388263082 2050560.3905852868 3358957.0012756954 2678765.8229316575 2560903.550722995 2576611.2264589113 2003267.5657477924 2250077.8827810935 1.3946879548726698 1.217072775358988 0.8890075557535346 0.9113286283454316 1.492818105088891 1.1905213785847744 1.138139959652295 1.1451209072257638 0.8903103226239245 1.0 21.10154350816979 -7.7092354473983855 6.93736048267367 0.9458490876329582 1.1666587546746858 0.2095360188464449 0.17633979597211868 0.32293521316999013 33.609904412552154 0.13182817893138193 0.047832259899226785 1.9532802218882638e-08 7.7092354473983855 0.22080966704172766 KFELLPT(ph)PPLS(ph)PSRR ddPTM_KYSE-520_SHP099_60min_R1 2 KFELLPTPPLSPSRR 15 2 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 2 KFELLPT(0.999)PPLS(0.966)PS(0.034)RR;KFELLPT(0.995)PPLS(0.968)PS(0.037)RR 74.77600000000001 0.043143 1065170000.0 671880.0 548130.0 555900.0 544760.0 531640.0 552730.0 495790.0 564090.0 744120.0 606440.0 True False 634609.4770404259 521797.0120400967 591734.2034714478 596533.8266119333 573477.0433821832 549280.2070452169 545909.2916441103 562133.3034495952 609006.5657386897 601067.4134031801 1.0558041625436558 0.8681172866879228 0.9844722742846952 0.9924574403966135 0.954097711162242 0.913841267712802 0.9082330525177362 0.9352250528220386 1.0132084224805318 1.0 19.197167281560077 -7.765515528571394 24.982248217923015 1.0066042426404622 0.9485987910884267 0.16440968433638636 0.04930979520852126 182.30469115870193 1117249.1027484585 0.04083127724747677 0.012035822701988712 1.715870356609012e-08 7.765515528571394 -0.058005451552035514 KFELLPTPPLS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 4 KFELLPTPPLSPSR 14 1 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1;P04198 H0YBT0 MYC;MYCN Myc proto-oncogene protein;N-myc proto-oncogene protein 1 KFELLPTPPLS(0.918)PS(0.082)R;KFELLPTPPLS(0.629)PS(0.37)R;KFELLPTPPLS(0.952)PS(0.048)R;KFELLPTPPLS(0.986)PS(0.014)R 139.81 3.9595e-06 2751830000.0 3670420.0 3663710.0 3628460.0 3684160.0 3656850.0 4298290.0 3810020.0 4026810.0 4523160.0 4217170.0 True False 3466814.4857991314 3487699.8722591717 3862356.3373412685 4034301.4587169047 3944623.2903696764 4271462.777740278 4195174.003811881 4012841.9359745206 3701868.1635846547 4179809.1547086113 0.8294193245387097 0.8344160566111567 0.9240508823208524 0.9651879570080872 0.9437328701780571 1.0219277052227176 1.0036759690537451 0.9600538654866575 0.8856548293393851 1.0 21.995005641333435 -4.8790487956641755 2.1369067668082584 0.9701805060497135 0.8233369683631054 0.6950463335820865 0.035745494683550524 0.18600043357802312 1.6644323816476407 0.01068324733600783 0.03245485091570177 1.3211471868107352e-05 4.8790487956641755 -0.14684353768660807 KFELLPTPPLS(ph)PSRR ddPTM_KYSE-520_SHP099_60min_R1 4 KFELLPTPPLSPSRR 15 2 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 1 KFELLPTPPLS(0.5)PS(0.5)RR;KFELLPT(0.002)PPLS(0.789)PS(0.209)RR;KFELLPTPPLS(0.997)PS(0.003)RR;KFELLPTPPLS(0.866)PS(0.134)RR 151.87 2.7062e-06 2963810000.0 2011200.0 1959520.0 2111920.0 1986320.0 2120440.0 2080720.0 1902950.0 1857950.0 2555210.0 1909660.0 True False 1899634.7267721964 1865381.717900514 2248057.7423914745 2175099.2555911136 2287306.564346766 2067733.4546761073 2095318.7570022754 1851505.205098792 2091248.2756022615 1892741.8980930003 1.0036417161188964 0.9855446850835539 1.1877254604320149 1.1491790073345962 1.208461949646332 1.0924539984872828 1.107028253093239 0.9782132508210678 1.1048776791538577 1.0 20.852046262072854 -9.334332747228913 7.416579408899074 0.9999949053926032 1.0929407236892534 0.11197852883213055 0.07648780669067018 0.0 0.0 0.08009869556770391 0.019426787194108026 4.630919725211565e-10 9.334332747228913 0.09294581829665027 KFES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 KFESPK 6 1 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 KFES(1)PK;KFES(1)PK;KFES(1)PK;KFES(1)PK 78.816 0.017651 10281200000.0 16085600.0 13746500.0 11510500.0 12661700.0 14028200.0 13396500.0 12881300.0 12971700.0 13782000.0 13450900.0 True False 15193299.702151392 13086097.506082837 12252485.247451179 13865064.161121076 15132139.530460356 13312887.474320656 14183467.513373164 12926704.20031754 11279536.215947174 13331735.490641834 1.1396340493566104 0.9815749431323909 0.9190465304424745 1.04000444434662 1.135046486714525 0.9985862293521793 1.063887557874907 0.9696190124227558 0.8460666072969123 1.0 23.668361263150604 -7.5003409823678595 6.172874197074121 0.9175878854126889 1.033983856576535 0.3052347264704468 0.07173023516625701 0.1977578545348148 28.458516058806612 0.04382838181468099 0.019029572100665228 3.1597958010178903e-08 7.5003409823678595 0.11639597116384603 KFESEILEAISQNSVVIIR ddPTM_KYSE-520_SHP099_60min_R1 2 KFESEILEAISQNSVVIIR 19 1 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ; 135.09 3.8582e-06 34813000.0 122185.0 123246.0 115480.0 158392.0 109797.0 90251.0 87799.0 117874.0 113027.0 69059.0 False True 115407.15448024118 117325.07716398245 122924.02557453289 173445.52805770858 118437.39924052663 89687.71003209133 96674.57975566515 117465.12260599842 92504.14597880289 68447.19098708905 1.6860758318337712 1.7140963050786564 1.7958958403087661 2.5340050564007073 1.7303471118758849 1.3103198062431634 1.412396598918143 1.7161423414462025 1.3514673815650318 1.0 16.0627037153036 -6.007283105972251 24.956693160321603 1.4188990729640645 1.935285183732096 0.4859550644769042 0.2773325553240752 330.8282354709185 1133638.913429821 0.0906893962844431 0.09879445121098321 9.833698619678764e-07 6.007283105972251 0.5163861107680314 KFFVGGNWK ddPTM_KYSE-520_SHP099_60min_R1 2 KFFVGGNWK 9 1 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 0 ; 112.11 0.005007500000000001 446390000.0 923540.0 948310.0 805730.0 646250.0 784520.0 869830.0 696640.0 813470.0 844010.0 649310.0 False True 872309.3951686537 902751.7641576709 857668.6450135821 707669.4056978519 846257.2606918036 864401.0683229442 767063.1697512107 810648.2624353261 690759.0597606722 643557.6185555354 1.3554487896927574 1.402752042907823 1.3326990781938355 1.0996208968611316 1.3149673569108349 1.3431603377846597 1.1919106349372157 1.2596358726275754 1.073344545762787 1.0 19.295709795039794 -11.965037119753106 0.052064057320729405 1.518782761303382e-08 1.8893417192667707 0.608232368180657 0.08217850182627315 244.9833461153083 1.3928070430814132 42.359808029346034 14.432965067695282 1.083834273240158e-12 11.965037119753106 1.889341704078943 KFGDPVVQSDMK ddPTM_KYSE-520_SHP099_60min_R1 2 KFGDPVVQSDMK 12 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 115.12 0.00038147 1660070000.0 2701100.0 2765500.0 1772440.0 1806120.0 2791200.0 2757900.0 1827200.0 2420600.0 2385400.0 2295800.0 False True 2551264.598490646 2632641.2288998696 1886694.318404269 1977773.1017702222 3010851.5602444266 2740686.923108941 2011911.2077535226 2412203.503572287 1952271.4910405183 2275460.9981053732 1.1212077906916078 1.1569704912946857 0.8291481682064404 0.8691746874224536 1.3231831100385218 1.2044534823453052 0.8841774081949586 1.0600944184852081 0.857967459194443 1.0 21.117727427736547 -6.77887187228676 24.992494192235878 0.9555677109098147 1.0768586555680115 0.16304106274717567 0.14743017131510663 573.5142322287633 822224.3906058356 0.06704913837429981 0.045321612368191676 1.6639034710235897e-07 6.77887187228676 0.12129094465819679 KFGLHGS(ph)SGK ddPTM_KYSE-520_SHP099_60min_R1 3 KFGLHGSSGK 10 1 Q9NV70-2 Q9NV70-2 EXOC1 Exocyst complex component 1 1 KFGLHGS(0.751)S(0.249)GK;KFGLHGS(0.976)S(0.024)GK;KFGLHGS(0.986)S(0.014)GK 131.66 0.00021907 13647360000.0 16806300.0 15891700.0 15716700.0 19163700.0 16132400.0 16829700.0 16013300.0 16205500.0 19519300.0 15048900.0 True False 15874021.036471566 15128238.878071973 16729823.629609123 20985012.286223486 17401928.09920008 16724659.599639755 17632080.6387475 16149286.90289213 15975087.161510509 14915578.45386703 1.064257821818238 1.0142576048835579 1.1216342484707142 1.4069191048224408 1.1666948186436872 1.121288031259941 1.1821251648591735 1.0827127457939956 1.0710336988217033 1.0 23.830316593365907 -7.760296001444688 1.3963847660793256 1.0050603641119085 1.1567932969060923 0.202218889488606 0.09814804928027951 0.7052351117974995 2.774468613883854 0.10160289255535118 0.031640730089398314 1.736616801964344e-08 7.760296001444688 0.15173293279418387 KFGYVDFES(ph)AEDLEK ddPTM_KYSE-520_SHP099_60min_R1 2 KFGYVDFESAEDLEK 15 1 P19338 P19338 NCL Nucleolin 1 KFGYVDFES(1)AEDLEK;KFGYVDFES(1)AEDLEK 203.77 6.8947e-12 218280000.0 506450.0 423770.0 416170.0 439980.0 438050.0 420840.0 412070.0 440930.0 547080.0 448950.0 True False 478356.20891695446 403411.4531082615 442996.98409554333 481795.56691518915 472522.04283644015 418213.38145732787 453726.05701564904 439400.5167438354 447744.0627645029 444972.652277815 1.0750238390342621 0.906598306757052 0.9955600233583835 1.0827532084250069 1.0619125476983806 0.9398631113990794 1.019671781384823 0.9874775775422246 1.0062282714960145 1.0 18.763357146166246 -6.249211480778791 24.932958661167003 0.9916794705179517 1.0194697338438634 0.09472311977009518 0.05096189130623633 2509.19863186599 5116306.1936578415 0.017744463990677174 0.017608414271104145 5.633632578815289e-07 6.249211480778791 0.027790263325911724 KFGYVDFESAEDLEK ddPTM_KYSE-520_SHP099_60min_R1 9 KFGYVDFESAEDLEK 15 1 P19338 P19338 NCL Nucleolin 0 ;;;;;;;; 227.67 2.5172e-14 6139762000.0 12217970.0 10945630.0 7599604.0 7121012.0 10743419.0 11059472.0 8339104.0 8645718.0 9159019.0 9407330.0 False True 11540214.848180648 10419785.505074415 8089486.6336363135 7797790.839469665 11588864.953607641 10990445.732945161 9182102.014132133 8615728.022183742 7495972.0296799 9323988.374992002 1.2376908232889712 1.1175245062532968 0.8675993907642825 0.8363149465505799 1.242908558819131 1.1787279532032438 0.9847826536077174 0.9240389064932883 0.8039448064719761 1.0 23.15251577506167 -7.092174659109171 3.513919210894634 0.8989237067874871 1.0691419319374513 0.2337889070485989 0.13736726375232983 0.41561024961456094 9.564861230827654 0.07670820727358876 0.04238187210781505 8.087705725570727e-08 7.092174659109171 0.1702182251499642 KFHS(ph)S(ph)DS(ph)EEEEHKK ddPTM_KYSE-520_SHP099_60min_R1 2 KFHSSDSEEEEHKK 14 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 3 KFHS(1)S(1)DS(1)EEEEHKK;KFHS(1)S(1)DS(1)EEEEHKK 66.152 0.016273 2234730000.0 4309600.0 3798800.0 3501000.0 3942500.0 3383500.0 3564800.0 3590600.0 3739600.0 4472200.0 2466900.0 True False 4070537.8970253924 3616299.9458849467 3726680.0617980543 4317194.014644152 3649762.200518426 3542550.7609045818 3953572.8888790407 3726628.200429202 3660161.2149875932 2445045.1852191575 1.66481090886692 1.479031949080649 1.524176356464357 1.7656908922348555 1.4927176898742203 1.448869240666835 1.61697334379719 1.524155145662542 1.4969707869261815 1.0 21.221429696215075 -11.690733878474026 0.3401557581539704 1.125165411869342e-09 1.583013021919948 0.7822202883652583 0.08924279097904365 30.280039529888516 1.081732072454726 22.136746691456292 0.07470225276834526 2.0382906933192412e-12 11.690733878474026 1.5830130207947826 KFHS(ph)SDS(ph)EEEEHKK ddPTM_KYSE-520_SHP099_60min_R1 1 KFHSSDSEEEEHKK 14 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 KFHS(0.831)S(0.17)DS(0.999)EEEEHKK 124.18 0.00016699 184990000.0 159190.0 124420.0 142480.0 153250.0 133040.0 123350.0 125460.0 124690.0 164900.0 82104.0 True False 150359.41336260235 118442.67644177268 151664.48877606037 167814.8339237074 143509.491105947 122580.12689564058 138142.72117160508 124257.47949286485 134958.3167907192 81376.6224359454 1.8476978874486452 1.4554877420109609 1.8637353607965381 2.062199546998903 1.7635223336887533 1.5063309735191823 1.6975725587571837 1.5269431904804427 1.6584408734455642 1.0 16.31232678166132 -9.459473831252287 0.34957541480792464 0.7750966912436569 1.7908106148219514 0.6435109498881887 0.16509979925943094 5.493585993378764 0.706461426045796 1.6400897136220611 0.1528365515255846 3.4715719348093216e-10 9.459473831252287 1.0157139235782946 KFHSS(ph)DS(ph)EEEEHKK ddPTM_KYSE-520_SHP099_60min_R1 3 KFHSSDSEEEEHKK 14 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 KFHS(0.03)S(0.97)DS(1)EEEEHKK;KFHS(0.111)S(0.889)DS(1)EEEEHKK;KFHS(0.439)S(0.561)DS(1)EEEEHKK 114.55 8.301200000000001e-05 2447860000.0 1695240.0 1347830.0 1382920.0 1429700.0 1349870.0 1435790.0 1237350.0 1480930.0 1752120.0 872160.0 True False 1601201.6578228418 1283078.2236659257 1472065.2359502353 1565578.2581450208 1456097.0892903234 1426828.7020307418 1362433.413372273 1475792.9994816612 1433979.1753508488 864433.3409302132 1.8523136279077288 1.4842997868235974 1.7029251027802235 1.811103510260616 1.6844527164158467 1.6505942499803827 1.57610002861084 1.7072374810226159 1.6588661119985835 1.0 19.7213951920149 -11.346036824631023 0.47377120002744283 6.73565025403769e-14 1.6870913172964976 0.811927479555103 0.0984925090626951 41.19576743679774 2.394400574178406 43.13920826891245 0.0496934192326662 4.507784805812354e-12 11.346036824631023 1.6870913172964304 KFIEDR ddPTM_KYSE-520_SHP099_60min_R1 1 KFIEDR 6 1 P40227-2;P40227;J3KRI6;Q92526-2;Q92526-3;Q92526 P40227-2 CCT6A;CCT6B T-complex protein 1 subunit zeta;T-complex protein 1 subunit zeta-2 0 84.244 0.044654 709880000.0 799850.0 731320.0 434330.0 400550.0 666210.0 678850.0 479890.0 545580.0 602660.0 574580.0 False True 755480.7260385562 696186.2894662998 462327.6067525711 438618.15157025104 718636.936783621 674613.0453433776 528401.9644750636 543687.5103193286 493232.1358222853 569489.668216475 1.326592505891401 1.2224739592670972 0.8118279093639863 0.7701950993139405 1.2618963554409066 1.184592246345974 0.9278517134997555 0.9546924916514228 0.8660949677401301 1.0 19.11931014297588 -4.599402951708007 6.417245325504784 0.9802680095715415 1.3016519000690971 0.41561012987451507 0.14536435193492153 0.19516946646789538 12.627706965657586 0.04061452782616834 0.11053084150521535 2.515342033435002e-05 4.599402951708007 0.32138389049755567 KFLDAGHK ddPTM_KYSE-520_SHP099_60min_R1 2 KFLDAGHK 8 1 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ; 102.62 0.0045721 3912100000.0 20738000.0 17943400.0 12982400.0 12316400.0 21125000.0 18839300.0 13785800.0 18086300.0 16762300.0 14149700.0 False True 19587621.799821913 17081372.130407516 13819266.276574431 13486946.952939322 22787417.315191895 18721716.940616503 15179403.200442469 18023562.846674133 13718688.863196317 14024344.666300006 1.3966871369676375 1.2179800580239186 0.9853769716442886 0.9616810819936541 1.6248472108610705 1.3349441550451988 1.0823609631413313 1.2851625709102903 0.9782053414703812 1.0 23.741430021942694 -7.768093998605838 24.830436157086808 0.9891024718392332 1.2291437001143124 0.21653651078676406 0.1875765777475986 264.9257381670554 988470.8695509526 0.17634222494994525 0.04973936005418114 1.705713164850412e-08 7.768093998605838 0.24004122827507923 KFLDGIYVSEK ddPTM_KYSE-520_SHP099_60min_R1 3 KFLDGIYVSEK 11 1 A0A2R8Y5Y7;P32969;H0Y9R4;H0Y9V9;D6RAN4 A0A2R8Y5Y7 RPL9 60S ribosomal protein L9 0 ;; 148.68 0.00017065 4362850000.0 4639930.0 3939830.0 2698340.0 2712350.0 4056290.0 3585930.0 2819660.0 3385370.0 3264120.0 2925400.0 False True 4382543.833428861 3750554.652994606 2872279.313896648 2970130.9285022365 4375496.945866965 3563548.8807368074 3104698.750029715 3373626.941621299 2671438.089769086 2899483.2319267606 1.511491353070036 1.2935252088015328 0.9906176667171015 1.024365616533857 1.5090609587555246 1.2290289667820438 1.0707765838558012 1.1635269707628075 0.9213497289287186 1.0 21.467364364333207 -1.0000000000000002 0.1687458284509677 0.9794555054530103 2.536818649542376 0.31158878760918063 0.1668315204736452 93.37872757379328 1.0040106704019405 0.48046138646972647 36.65395640824064 0.09999999999999995 1.0000000000000002 1.5573631440893658 KFLEESVSMS(ph)PEER ddPTM_KYSE-520_SHP099_60min_R1 6 KFLEESVSMSPEER 14 1 A0A087WTB8;Q5TBK7;P15374 A0A087WTB8 UCHL3 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase isozyme L3 1 KFLEESVSMS(1)PEER;KFLEESVS(0.001)MS(0.999)PEER;KFLEESVSMS(1)PEER;KFLEESVS(0.002)MS(0.998)PEER;KFLEESVSMS(1)PEER;KFLEESVSMS(1)PEER 252.77 3.1961e-19 4890730000.0 4618490.0 4445390.0 3933030.0 4060150.0 4241710.0 4088470.0 3838520.0 4010560.0 5176690.0 4117350.0 True False 4362293.152968445 4231826.791733573 4186559.4068704993 4446025.435271391 4575508.44497148 4062952.3421890526 4226555.061945074 3996648.30343174 4236733.589735278 4080873.4822498267 1.068960645788869 1.036990440928966 1.0258978684539877 1.0894788712783745 1.1212081101933493 0.9956085038806707 1.0356986268574373 0.9793609923991928 1.038192830079977 1.0 21.96044655329433 -6.294637537023422 24.99912087568157 1.0101026490413696 1.0655541858216397 0.4944983558067745 0.029616336484150775 627.8193550729907 472763.2496597928 0.010962060439537097 0.009668365351969414 5.074140202799739e-07 6.294637537023422 0.05545153678027015 KFLLFT(ph)DT(ph)FLR ddPTM_KYSE-520_SHP099_60min_R1 1 KFLLFTDTFLR 11 1 Q9UPY3-2;Q9UPY3 Q9UPY3-2 DICER1 Endoribonuclease Dicer 2 KFLLFT(1)DT(1)FLR 69.345 0.035794 1382500000.0 1864800.0 1562900.0 1957600.0 841490.0 2164500.0 1872300.0 1172700.0 1414900.0 1744200.0 1850900.0 True False 1761355.8266133617 1487815.938039274 2083790.0282707468 921464.9565968057 2334833.83567966 1860614.2812055773 1291247.9604490756 1409992.042140142 1427497.247703894 1834502.4659784094 0.9601272602672486 0.8110187724636094 1.1358883767754342 0.5022969299228244 1.2727340949276975 1.014233731331204 0.7038682064460482 0.7685964277993708 0.7781386365935223 1.0 20.806957413214217 -6.75657617809981 24.991806754609367 0.7933671855923585 0.9459470754869336 0.09464359628179186 0.20354739906243707 273.94669486411294 1407810.3990118436 0.07738917751324413 0.0579919636297868 1.7515551729991828e-07 6.75657617809981 0.15257988989457505 KFLPLFDR ddPTM_KYSE-520_SHP099_60min_R1 3 KFLPLFDR 8 1 P61604;B8ZZL8;S4R3N1 P61604 HSPE1;HSPE1-MOB4 10 kDa heat shock protein, mitochondrial 0 ;; 158.76 0.00058481 7425887000.0 8285646.0 8832660.0 6452130.0 5498824.0 11194733.0 9929917.0 7115368.0 6301258.0 6606038.0 5846008.0 False True 7826024.6993542 8408325.755507037 6868044.623573 6021430.5796782775 12075694.797782257 9867940.704687307 7834658.836739676 6279400.406722668 5406548.023866145 5794216.917245406 1.350661325098392 1.4511582627293818 1.1853274949254222 1.039213868876157 2.084094359988699 1.7030671867525742 1.3521514552589973 1.0837358173514706 0.9330938245985516 1.0 22.466182264905274 -7.264721678242325 3.039251577472997 0.9819000865897465 1.4665852633459577 0.3759728997742421 0.2684240732478872 0.3166966048951337 5.927897878048216 0.1783055504848446 0.08212124196130283 5.435985902252416e-08 7.264721678242325 0.48468517675621126 KFPAGK ddPTM_KYSE-520_SHP099_60min_R1 1 KFPAGK 6 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 88.59100000000001 0.038918 2299300000.0 3052400.0 2777000.0 1886900.0 2122600.0 2380800.0 4357000.0 3407800.0 6309300.0 4305000.0 5023100.0 False True 2883077.2871914543 2643588.7516380167 2008532.5931467467 2324331.2658170406 2568155.415101007 4329806.346852911 3752293.6809229683 6287414.510901684 3523320.520218588 4978599.241912667 0.579094067849462 0.5309904700468336 0.4034332742105013 0.46686450402545043 0.51583895194472 0.8696836472400007 0.7536846206326543 1.262888255389321 0.7076931379728822 1.0 22.24730845800091 -6.397801068092194 1.7662425346089294 0.9648341927490733 0.48385128650644643 0.6695487357628811 0.14736390565627797 0.20206271398655512 1.251668905146114 0.06227903953910855 0.05147274969333955 4.001279894754489e-07 6.397801068092194 -0.4809829062426269 KFPGRPEEEYR ddPTM_KYSE-520_SHP099_60min_R1 1 KFPGRPEEEYR 11 2 Q9NUQ8-2;Q9NUQ8 Q9NUQ8-2 ABCF3 ATP-binding cassette sub-family F member 3 0 60.301 0.025269999999999997 504740000.0 161540.0 163580.0 167970.0 122410.0 159320.0 146220.0 136220.0 149600.0 164080.0 127900.0 False True 152579.05417799353 155721.37126141423 178797.61496150238 134043.8095960914 171857.57759320104 145307.38674244497 149990.44697908522 149081.0725169026 134287.20812020137 126766.90550469435 1.203618985337962 1.228407135454195 1.4104439502538875 1.0574038157863495 1.355697505661972 1.1462564788809493 1.1831987724393167 1.1760251772603374 1.059323863634334 1.0 16.951818630828626 -7.665319042654178 0.6375972873796689 0.9946955003908394 1.251580809240109 0.42948497918142303 0.09250514626146182 0.6671596194951991 0.6187711816222133 0.08661760920590936 0.04011936389995197 2.161130324695822e-08 7.665319042654178 0.25688530884926963 KFPHLEFR ddPTM_KYSE-520_SHP099_60min_R1 2 KFPHLEFR 8 1 A0A3B3IU56;F5GY90;A0A1W2PNU5;F5H226;A0A3B3IU34;F5H0P4;F5H345;A0A3B3IRR1;A0A3F2YNY7;P08397-4;P08397-3;P08397-2;P08397 A0A3B3IU56 HMBS Porphobilinogen deaminase 0 ; 100.02 0.0054646 1028240000.0 2028890.0 1728100.0 1562230.0 1364920.0 2377900.0 1887980.0 1571840.0 1476250.0 1647050.0 1202870.0 False True 1916343.4272080562 1645079.4820690164 1662933.8454563764 1494641.58642184 2565027.2015997516 1876196.4165093764 1730736.9268800847 1471129.2333093411 1347987.2387516908 1192213.5076187004 1.6073827506246898 1.3798530813116352 1.3948288916621 1.2536693946767994 2.1514830902420132 1.573708404174054 1.4517004847034642 1.2339477987023821 1.1306592570353688 1.0 20.185211193378933 -7.4100359522116435 1.7866534533140894 1.0493345146249633 1.5546324173731245 0.44189697619077406 0.22652198310551727 0.3900284590748958 2.2326761067681744 0.20068367288992126 0.07042271694632156 3.890129399927298e-08 7.4100359522116435 0.5052979027481612 KFPNS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 KFPNSPVK 8 1 E9PKY2;A0A0C4DFM7;Q5TAX3;X6R5G7;E9PRG2;Q5TAX3-2 E9PKY2 ZCCHC11 Terminal uridylyltransferase 4 1 KFPNS(1)PVK;KFPNS(1)PVK 78.692 0.013429 1181780000.0 2095590.0 1785170.0 1414990.0 1557170.0 1791970.0 1778120.0 1617000.0 1715870.0 1759350.0 1681840.0 True False 1979343.445244904 1699407.7536052007 1506202.5194640479 1705162.968619768 1932987.8440854144 1767022.0935198746 1780462.1403992113 1709918.0474570694 1439896.3896043156 1666940.2060517198 1.1874111849117468 1.019477331841664 0.9035732139616501 1.0229298942033331 1.1596023882967281 1.0600392786164818 1.0681019834636885 1.0257824733300698 0.8637960644160263 1.0 20.668770924410463 -7.597639198213997 6.888737884249598 0.9332633478668813 1.0544255018552797 0.2862150066330654 0.07952608281575961 0.305444135571031 22.8359239396109 0.057122001763906485 0.021161623085179007 2.5255780928788148e-08 7.597639198213997 0.12116215398839847 KFPNS(ph)PVKAEK ddPTM_KYSE-520_SHP099_60min_R1 1 KFPNSPVKAEK 11 2 E9PKY2;A0A0C4DFM7;Q5TAX3;X6R5G7;E9PRG2;Q5TAX3-2 E9PKY2 ZCCHC11 Terminal uridylyltransferase 4 1 KFPNS(1)PVKAEK 53.169 0.051472000000000004 563080000.0 317820.0 285060.0 253330.0 211230.0 244360.0 224470.0 175890.0 223030.0 295660.0 214040.0 True False 300189.8910415373 271365.289716217 269660.05714233126 231305.23569138473 263589.7417817891 223068.99946708124 193670.67772097577 222256.3609855933 241975.59698207412 212143.7721206002 1.4150304203645645 1.2791574647873725 1.2711193661109883 1.0903230077378447 1.2425052083638013 1.051499166047968 0.9129218161109968 1.0476685634648009 1.1406207901522325 1.0 17.69468280066099 -4.6547630611040915 0.515735040577801 1.01969768255305 1.5656616482397048 0.7283728411759876 0.07596306567516371 1.6629826938825314 0.45278142197008864 0.05179085700914291 0.5236538429934628 2.2143024414677905e-05 4.6547630611040915 0.5459639656866548 KFPTTATKIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KFPTTATKISPK 12 2 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YHI8;H0YIS4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KFPTTAT(0.04)KIS(0.959)PK;KFPTTATKIS(1)PK 98.281 0.0010472 2124130000.0 2501000.0 2452400.0 2372100.0 1711600.0 2087600.0 1855750.0 1434910.0 1641210.0 2682400.0 1738260.0 True False 2362264.544380103 2334583.022872555 2525009.3614941947 1874269.9493886938 2251882.24318081 1844167.5758944887 1579964.7061720677 1635517.0255712953 2195343.7778012417 1722860.368745815 1.371129423622271 1.3550622355844506 1.4655914125718252 1.0878826766170842 1.3070602145315497 1.0704103532412097 0.9170590576195269 0.9493032954039666 1.2742435879463516 1.0 20.71637435070077 -5.7530066927197225 1.0555069195254412 1.030928581587922 1.3941037147896906 0.565371148128847 0.12316413809707048 0.3813227069493745 0.9055635607121675 0.055142359292545254 0.08492608061609731 1.7660106052699595e-06 5.7530066927197225 0.36317513320176853 KFPVFK ddPTM_KYSE-520_SHP099_60min_R1 2 KFPVFK 6 1 P04080;A0A1W2PS52 P04080 CSTB Cystatin-B 0 ; 104.04 0.026552 1337480000.0 2088600.0 1495800.0 1370210.0 1148320.0 1720890.0 1662790.0 1251640.0 1562120.0 1505930.0 1449690.0 False True 1972741.1944791223 1423939.5227584268 1458535.9290135147 1257455.9875450013 1856314.2524752913 1652411.9108293655 1378167.9860292352 1556701.3703215497 1232491.0734059885 1436846.8744417538 1.3729655049328586 0.9910168912826276 1.015094896302146 0.875149614000135 1.291936034030425 1.150026450432558 0.9591613487447529 1.0834149400410966 0.8577748230025124 1.0 20.45447489051084 -4.2570556250516525 24.375581374604497 1.0326721297897492 1.3729657007392924 0.4239006342472821 0.12144236605623483 325.57898662035444 1810265.158281995 0.03074754945287938 0.23307244558957294 5.532792398895249e-05 4.2570556250516525 0.34029357094954316 KFQEQECPPS(ph)PEPTR ddPTM_KYSE-520_SHP099_60min_R1 1 KFQEQECPPSPEPTR 15 1 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 KFQEQECPPS(0.996)PEPT(0.004)R 54.875 0.040475 756540000.0 736460.0 2326900.0 1504700.0 1254500.0 1854300.0 1171900.0 1688700.0 1819500.0 2976700.0 969250.0 True False 695607.0957033867 2215112.2312518917 1601695.3696051247 1373727.3028208215 2000222.8604762296 1164585.7374057681 1859410.2761237803 1813188.5791744913 2436206.3165005064 960663.1990650886 0.7240904995427608 2.3058156421601503 1.6672808650980744 1.4299780653175058 2.0821270789001116 1.212272665944876 1.9355485647137796 1.8874342026831827 2.5359629877270273 1.0 19.87367119658553 KFQEQECPPS(ph)PEPTRK ddPTM_KYSE-520_SHP099_60min_R1 8 KFQEQECPPSPEPTRK 16 2 P62070-2;P62070-3;P62070;P62070-4 P62070-2 RRAS2 Ras-related protein R-Ras2 1 KFQEQECPPS(0.999)PEPT(0.001)RK;KFQEQECPPS(0.999)PEPT(0.001)RK;KFQEQECPPS(0.997)PEPT(0.003)RK;KFQEQECPPS(0.957)PEPT(0.043)RK;KFQEQECPPS(1)PEPTRK;KFQEQECPPS(0.999)PEPT(0.001)RK;KFQEQECPPS(1)PEPTRK;KFQEQECPPS(0.996)PEPT(0.004)RK 174.82 1.8516e-08 11854560000.0 2455592.0 3131312.0 2483622.0 3842369.0 3604673.0 3280978.0 2953083.0 3872580.0 5411310.0 2801884.0 True False 2319375.416658709 2980879.071324862 2643720.2480557044 4207546.594509639 3888340.257316199 3260500.1992850024 3251609.4489527126 3859146.923846967 4428752.512024167 2777061.4875927675 0.8351905159540441 1.0733932556562762 0.9519847723455893 1.5151074664021411 1.4001635450595364 1.174082825984272 1.170881330312674 1.3896512342591956 1.5947621368164702 1.0 21.405127689895806 -5.242756035297615 24.27814266301088 1.327863519423386 0.9655098031061033 0.48483277561900673 0.17318530427827988 500.52476186530043 650407.0410047624 0.047231957163431044 0.08160437809827421 5.717997546883047e-06 5.242756035297615 -0.36235371631728275 KFRDEATCK ddPTM_KYSE-520_SHP099_60min_R1 2 KFRDEATCK 9 2 P00533;E9PFD7;Q504U8;P00533-3;P00533-4;P00533-2;A0A1W2PRR9 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 0 ; 169.93 5.7053000000000004e-05 4470300000.0 3897000.0 5603500.0 3249700.0 3917700.0 6416300.0 5933900.0 3894300.0 5782600.0 7494400.0 3681900.0 False True 3680825.6415230967 5334299.448975022 3459180.861703841 4290037.030100545 6921226.306246898 5896864.329031558 4287973.848705417 5762541.510268991 6133605.878449755 3649281.2304748525 1.0086440066018534 1.4617397542367299 0.9479074489563867 1.1755841107215286 1.8965998697081214 1.6158974758610876 1.1750187442110227 1.5790894552457269 1.6807709494210827 1.0 21.799180905277346 -5.570128273243318 24.989378972305637 1.512924066263508 1.1533411080420837 0.2780320452140964 0.26942200151728507 149.25906367805263 78939.43985099223 0.07788796768279098 0.10055296491788247 2.690739949441315e-06 5.570128273243318 -0.3595829582214243 KFS(ph)APR ddPTM_KYSE-520_SHP099_60min_R1 1 KFSAPR 6 1 H7C422;P39023;H7C3M2;F8WCR1;Q92901 H7C422 RPL3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like 1 KFS(1)APR 82.45200000000001 0.0138 806130000.0 692220.0 616980.0 577540.0 573830.0 645880.0 614190.0 553010.0 578830.0 732950.0 560410.0 True False 653821.1766936415 587339.35469414 614769.152496673 628366.6306717197 696707.0814454966 610356.6123877874 608913.6476574943 576822.1738299369 599864.7561659041 555445.2033923826 1.1771119323750163 1.057420878075756 1.1068043233463343 1.131284646683362 1.2543218974443506 1.0988601731728591 1.0962623206367668 1.0384861914496595 1.0799710799593354 1.0 19.083285066170973 -6.963042498956223 2.0578612653575292 1.0434355858483988 1.1385417439226986 0.4211268597069774 0.051957805792166356 0.3739202280012268 3.1586545190128996 0.03098344937163992 0.01682072044092755 1.0888235386107157e-07 6.963042498956223 0.09510615807429978 KFS(ph)EPNTYIDGLPSQDR ddPTM_KYSE-520_SHP099_60min_R1 12 KFSEPNTYIDGLPSQDR 17 1 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 KFS(0.668)EPNT(0.198)Y(0.134)IDGLPSQDR;KFS(0.985)EPNT(0.009)Y(0.006)IDGLPSQDR;KFS(1)EPNTYIDGLPSQDR;KFS(1)EPNTYIDGLPSQDR;KFS(1)EPNTYIDGLPSQDR;KFS(1)EPNTYIDGLPSQDR;KFS(0.909)EPNT(0.091)YIDGLPSQDR;KFS(0.858)EPNT(0.142)YIDGLPSQDR;KFS(1)EPNTYIDGLPSQDR;KFS(1)EPNTYIDGLPSQDR;KFS(1)EPNTYIDGLPSQDR;KFS(1)EPNTYIDGLPSQDR 244.68 1.3378e-23 66732310000.0 23091160.0 19871690.0 20110020.0 19964060.0 19468420.0 19990050.0 20501000.0 20685300.0 22396020.0 20387730.0 True False 21810247.323713746 18917024.184385203 21406344.066369675 21861438.25998649 21000473.893842757 19865284.68301747 22573441.150478818 20613547.522285324 18329467.32572033 20207110.573613923 1.0793352787504993 0.9361568105183088 1.0593471040001974 1.0818685917685211 1.039261591474874 0.9830838808274349 1.1171038564986528 1.0201135608770369 0.9070800725787393 1.0 24.268359708881363 -7.5965631622672225 7.486936407149492 0.9551802699966674 1.0401387885008497 0.3039491079687143 0.05288785213560618 0.291282515822574 24.991674181957897 0.03540115684847187 0.013190066672270427 2.531843386075219e-08 7.5965631622672225 0.08495851850418235 KFS(ph)KEEPVSS(ph)GPEEAVGK ddPTM_KYSE-520_SHP099_60min_R1 2 KFSKEEPVSSGPEEAVGK 18 2 O00567 O00567 NOP56 Nucleolar protein 56 2 KFS(1)KEEPVS(0.344)S(0.656)GPEEAVGK;KFS(0.999)KEEPVS(0.011)S(0.991)GPEEAVGK 97.346 0.00070169 277150000.0 646120.0 814460.0 750060.0 755540.0 772700.0 840110.0 818080.0 1108680.0 1374770.0 950690.0 True False 610278.4355917134 775332.1190706159 798410.0677384313 827346.2944386164 833507.0939384025 834866.5618670179 900779.5100913978 1104834.2478478577 1125146.423131454 942267.6262256274 0.6476699597929106 0.8228364187532443 0.8473283444286037 0.8780374825702726 0.8845757518775436 0.886018513881435 0.9559699230032814 1.1725270157836278 1.194083710207015 1.0 19.845777351888618 -6.944122307781024 1.7726321300756143 1.1396727716924893 0.8242270613900828 0.723450919898771 0.08127323961076266 0.1927775606414222 1.2050384913479153 0.05007552890824084 0.026442977524699377 1.1373069477028318e-07 6.944122307781024 -0.3154457103024064 KFS(ph)KEEPVSSGPEEAVGK ddPTM_KYSE-520_SHP099_60min_R1 2 KFSKEEPVSSGPEEAVGK 18 2 O00567 O00567 NOP56 Nucleolar protein 56 1 KFS(0.998)KEEPVS(0.001)S(0.001)GPEEAVGK;KFS(0.995)KEEPVS(0.004)S(0.001)GPEEAVGK 187.79 1.4923e-12 4069900000.0 888480.0 971600.0 906100.0 1051320.0 995120.0 1264010.0 1467390.0 1756240.0 1783370.0 1451750.0 True False 839194.243259031 924922.8775986686 964508.6558112589 1151237.1367091173 1073430.282541715 1256120.844729298 1615728.1015463222 1750148.0133494963 1459554.9630992415 1438888.6244444104 0.5832239055910697 0.6428036624139715 0.6703150191236511 0.8000877324008574 0.7460134608793592 0.8729798980892747 1.1229000452833475 1.2163193061765087 1.0143627090406742 1.0 20.45652349553704 -6.404042685808155 1.4474765838054156 1.1124430130503016 0.6669060522661455 0.849006012306733 0.07921133525492068 0.14894860855099815 0.6281921344677776 0.03998948719711007 0.032238269478233696 3.9441853367738377e-07 6.404042685808155 -0.44553696078415606 KFS(ph)WGQQR ddPTM_KYSE-520_SHP099_60min_R1 1 KFSWGQQR 8 1 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 KFS(1)WGQQR 59.739 0.03891 619630000.0 1735700.0 1729500.0 1573900.0 1270800.0 1492300.0 1742600.0 1496500.0 1630400.0 1914200.0 1442800.0 True False 1639417.2609678325 1646412.2239675738 1675356.1123290376 1391576.449920047 1609735.5199744797 1731723.7870153522 1647780.8244325418 1624744.5229382194 1566629.5330551516 1430017.9144814152 1.1464312749972467 1.151322796235481 1.1715630240454662 0.9731181937148609 1.1256750727897262 1.210980484565012 1.152279847508132 1.136170747572362 1.0955314036211061 1.0 20.44760178973456 -8.138662558853234 2.786034567607435 1.0000783748808948 1.1328042270101344 0.3230028105651014 0.058406068615544135 0.718246627616714 10.749270787778993 0.059539696170411244 0.01598216579234353 7.266703515265548e-09 8.138662558853234 0.1327258521292396 KFSGFSAKPNNSGEAPSS(ph)PTPK ddPTM_KYSE-520_SHP099_60min_R1 4 KFSGFSAKPNNSGEAPSSPTPK 22 2 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 KFSGFSAKPNNSGEAPS(0.186)S(0.79)PT(0.024)PK;KFSGFSAKPNNSGEAPS(0.167)S(0.821)PT(0.012)PK;KFSGFSAKPNNSGEAPS(0.001)S(0.991)PT(0.008)PK;KFSGFSAKPNNSGEAPS(0.199)S(0.798)PT(0.003)PK 169.13 9.9552e-10 9001880000.0 8022600.0 6981200.0 6579000.0 6013400.0 6603400.0 6720000.0 5875300.0 6391700.0 8159500.0 6210960.0 True False 7577570.385343395 6645812.673005158 7003092.866772182 6584911.728005367 7123050.011793512 6678057.98734257 6469232.661402286 6369528.68453399 6677940.484256347 6155935.726453766 1.230937216056443 1.0795779826690286 1.137616306921131 1.069684938344657 1.1571027262652835 1.0848160676280454 1.0508934707687405 1.0346970741039994 1.0847969798578925 1.0 22.55354673802563 -1.0000000000019924 0.14023226506126535 0.9852139429537281 1.6475044326291697 0.590148204958219 0.04039110838223312 55.397483130777836 0.5183827225437595 0.16985900945096655 7.357656288243762 0.09999999999954123 1.0000000000019924 0.6622904896754416 KFT(ph)PERNPIT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 1 KFTPERNPITPVK 13 2 F8VSE7;Q96AV8-2;Q96AV8-3;Q96AV8;F8VXV5 F8VSE7 E2F7 Transcription factor E2F7 2 KFT(1)PERNPIT(1)PVK 67.995 0.018772999999999998 0.0 652950.0 626910.0 572820.0 499750.0 600080.0 628000.0 458330.0 582800.0 631090.0 610420.0 True False 616729.5618764445 596792.3025889051 609744.8937444059 547246.0897446836 647302.8820118504 624080.4190552277 504662.4692697413 580778.402826542 516499.96448426234 605012.1536995745 1.0193672277576895 0.9864137421696307 1.0078225536725027 0.9045208206121834 1.06990062605135 1.031517160835618 0.8341360850088593 0.9599450180879077 0.8537017997505156 1.0 19.206604598486834 -6.743398857026907 24.99820739100186 0.9086077836437909 1.001240194719611 0.36212892916144035 0.05926727567948885 257.2743674849485 356497.3045204947 0.021840706469418894 0.016883490230458372 1.8055151751462946e-07 6.743398857026907 0.0926324110758201 KFTNFQSPNIDPTEENDLDDS(ph)LSVK ddPTM_KYSE-520_SHP099_60min_R1 1 KFTNFQSPNIDPTEENDLDDSLSVK 25 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 KFTNFQSPNIDPTEENDLDDS(1)LSVK 277.28 1.4437e-38 384510000.0 372410.0 340130.0 293050.0 237530.0 244080.0 315970.0 256460.0 276290.0 338940.0 307490.0 True False 351751.6749190701 323789.6442544613 311940.47189657856 260104.77978400115 263287.70737477107 313997.91402687976 282385.47960839985 275331.614476571 277397.039982088 304765.8778235998 1.1541701368637665 1.0624209198441583 1.0235413299028557 0.8534576824724166 0.8639015274773099 1.0302922238841434 0.92656527569614 0.9034200824671536 0.910197171556873 1.0 18.21734185938616 -4.802179732977569 2.0742961708693044 0.9253672900561076 1.1341401683149839 0.6419903855626243 0.0550077387356442 0.21319203889185367 1.7621229455747995 0.015859218261899753 0.055660237204845885 1.5769585096080768e-05 4.802179732977569 0.20877287825887625 KFTNFQSPNIDPTEENDLDDSLS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 3 KFTNFQSPNIDPTEENDLDDSLSVK 25 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 KFTNFQSPNIDPTEENDLDDSLS(1)VK;KFTNFQSPNIDPTEENDLDDS(0.046)LS(0.954)VK;KFTNFQSPNIDPTEENDLDDS(0.024)LS(0.976)VK 234.68 1.0698e-28 2870100000.0 865640.0 782150.0 865880.0 775040.0 689750.0 723270.0 669380.0 779980.0 924770.0 891930.0 True False 817621.223589442 744574.339968914 921696.0102569843 848699.5685757281 744029.4008593414 718755.8036466166 737047.4629192491 777274.4314287013 756855.0795545978 884028.1941110389 0.9248813884399077 0.8422518025204424 1.0426092927769384 0.9600367660549146 0.8416353752241154 0.8130462449440123 0.8337375072753299 0.8792416764606845 0.8561435988087192 1.0 19.753732856333546 -5.761168991856736 24.99999599421036 0.8598719269247479 0.9424427821148947 0.21008062103815783 0.06627420930421439 10.211816324308968 944119.1521562487 0.020045633667744246 0.024285033026199186 1.733129474427611e-06 5.761168991856736 0.08257085519014684 KFVADGIFK ddPTM_KYSE-520_SHP099_60min_R1 1 KFVADGIFK 9 1 E9PPU1;E9PL09;P23396;P23396-2;E9PQX2;E9PQ96;E9PJH4;F2Z2S8;E9PK82;H0YCJ7 E9PPU1 RPS3 40S ribosomal protein S3 0 112.13 0.0022251 1090700000.0 2383200.0 2435500.0 1907400.0 1508100.0 2294000.0 2189300.0 1877200.0 1832700.0 1996400.0 2054100.0 False True 2250999.1452085804 2318494.9242399707 2030354.0559479035 1651429.3705732017 2474524.7489254507 2175635.7666203994 2066965.6957064962 1826342.7914553946 1633904.0851485247 2035902.272065618 1.1056518655606813 1.138804625375085 0.9972748121587952 0.8111535574336131 1.215443777866021 1.0686346768565704 1.0152578166776942 0.8970680059226982 0.8025454402046382 1.0 20.95723687976028 -7.200282801162157 3.476219023675512 0.8848014832919024 1.0524402186279083 0.2889843232529471 0.10889382291819495 0.31579775375445046 7.5852953943418715 0.06126412966191211 0.03145778546177259 6.305466153687606e-08 7.200282801162157 0.16763873533600582 KFVEWLQNAEEES(ph)ES(ph)EGEEN ddPTM_KYSE-520_SHP099_60min_R1 4 KFVEWLQNAEEESESEGEEN 20 1 E9PFD4;B5MCE7;B5MCH7;Q9Y6E2 E9PFD4 BZW2 Basic leucine zipper and W2 domain-containing protein 2 2 KFVEWLQNAEEES(1)ES(1)EGEEN;KFVEWLQNAEEES(1)ES(1)EGEEN;KFVEWLQNAEEES(1)ES(1)EGEEN;KFVEWLQNAEEES(1)ES(1)EGEEN 148.87 8.582600000000001e-07 84334000.0 329892.0 330640.0 304984.0 276321.0 323185.0 280289.0 271115.0 307969.0 364591.0 296267.0 True False 311592.23313660204 314755.5580992418 324643.75663165376 302582.46476106235 348617.8208288898 278539.6123830744 298521.95002741646 306900.72741950495 298390.4649911769 293642.3048722383 1.0611285498258625 1.071901265167462 1.1055755633470592 1.030445748928152 1.187219331290057 0.9485677225707142 1.0166176503664934 1.0451516090402413 1.0161698775692571 1.0 18.163700305808252 -6.280510597031951 24.99995540685509 1.0088306211127138 1.0875963437178437 0.48334565991537726 0.044276839738018194 779.069267551165 1021257.5683081587 0.015153690373801059 0.013383224707079207 5.241908102990067e-07 6.280510597031951 0.07876572260512993 KGAAEEAELEDS(ph)DDEEKPVKQDDFPK ddPTM_KYSE-520_SHP099_60min_R1 1 KGAAEEAELEDSDDEEKPVKQDDFPK 26 3 Q9UBB9;F6XM96 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 KGAAEEAELEDS(1)DDEEKPVKQDDFPK 229.8 1.5043e-22 2300800000.0 2481600.0 2282600.0 2039500.0 2051700.0 2382100.0 1937000.0 2017800.0 2125400.0 2497500.0 2283700.0 True False 2343940.701053049 2172940.4697475485 2170969.4333153786 2246692.9511339036 2569557.7177050235 1924910.4645063335 2221778.9158302606 2118027.483472089 2044016.9568515494 2263468.194691713 1.0355527444786103 0.9600048610550526 0.9591340573756404 0.9925886992372366 1.1352303176740683 0.8504252319606852 0.9815816811743933 0.9357443097452344 0.9030464672069081 1.0 21.110103603905102 -6.284307654814881 24.98835199127759 0.933107456854763 1.0088477911989724 0.31401146809302105 0.06031458124144948 1103.9046455328728 1206241.898574978 0.021227335615333257 0.01873098078501533 5.196277610911497e-07 6.284307654814881 0.07574033434420935 KGAANASGS(ph)SPDAPAK ddPTM_KYSE-520_SHP099_60min_R1 1 KGAANASGSSPDAPAK 16 1 E7EPJ7;O75962-4;O75962;O75962-5 E7EPJ7 TRIO Triple functional domain protein 1 KGAANAS(0.001)GS(0.734)S(0.264)PDAPAK 236.3 5.6885e-23 1555900000.0 1767800.0 1613800.0 1427700.0 1340600.0 1360800.0 1566500.0 1449000.0 1549500.0 1740500.0 1388900.0 True False 1669736.6099780677 1536270.6256368146 1519731.8264007675 1468010.2209339123 1467887.218107131 1556722.892436331 1595479.0608772158 1544125.146156017 1424469.0744344853 1376595.4265478489 1.2129465039451295 1.1159928298537143 1.103978552516238 1.066406434761525 1.0663170818373404 1.1308499668200962 1.1590036041876672 1.1216985879637056 1.0347768465326748 1.0 20.39267319134301 -13.999999999999991 0.12819664392976096 0.6259267726259652 1.1599589815693532 0.4397922821692849 0.04392142053651094 165.70891981400203 1.3450304054490678 15.918287964696088 0.38122396023449073 1.0000000000000205e-14 13.999999999999991 0.534032208943388 KGAANASGSS(ph)PDAPAK ddPTM_KYSE-520_SHP099_60min_R1 7 KGAANASGSSPDAPAK 16 1 E7EPJ7;O75962-4;O75962;O75962-5 E7EPJ7 TRIO Triple functional domain protein 1 KGAANAS(0.015)GS(0.038)S(0.947)PDAPAK;KGAANAS(0.001)GS(0.46)S(0.538)PDAPAK;KGAANAS(0.019)GS(0.246)S(0.736)PDAPAK;KGAANAS(0.009)GS(0.248)S(0.743)PDAPAK;KGAANAS(0.001)GS(0.05)S(0.949)PDAPAK;KGAANAS(0.209)GS(0.089)S(0.701)PDAPAK;KGAANAS(0.001)GS(0.081)S(0.918)PDAPAK 276.14 7.7319e-30 8105670000.0 7815980.0 7135220.0 6832820.0 6238890.0 6511420.0 6749480.0 6514660.0 7002860.0 8186350.0 7038830.0 True False 7382412.008630155 6792433.321016428 7273274.510098544 6831832.229809318 7023831.709088123 6707353.99172751 7173225.409754566 6978568.713139818 6699915.201089777 6976471.442326866 1.0581870892268563 0.9736201713384989 1.0425434362091626 0.9792675690407031 1.0067885702898343 0.9614249907243084 1.0282025045259953 1.000300620568763 0.960358722382321 1.0 22.73406610435382 -4.247761305308902 24.126675852951127 0.9961264832102211 1.0581871570477048 0.35326602760388615 0.025697852682457212 1614.4683787903532 2847675.029490394 0.0060549072373213015 0.11382529049914475 5.652475578986288e-05 4.247761305308902 0.062060673837483704 KGAAPT(ph)PPGK ddPTM_KYSE-520_SHP099_60min_R1 2 KGAAPTPPGK 10 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;H0YAB7;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KGAAPT(1)PPGK;KGAAPT(1)PPGK 89.62899999999999 0.0043952 10452500000.0 6552600.0 6384800.0 5245500.0 4216400.0 4445400.0 6297300.0 4850800.0 6175700.0 7117700.0 6411900.0 True False 6189114.215715743 6078064.624219813 5583633.323096752 4617125.388293112 4795227.689133921 6257996.214835169 5341166.203245823 6154277.938119208 5825305.1026155315 6355095.554382723 0.9738821647532093 0.9564080621932021 0.8786072963523043 0.7265233620459036 0.7545484797355948 0.9847210260307431 0.8404541139530697 0.9684005355159416 0.9166353287321027 1.0 22.599482386890788 -7.559936386315946 1.043930774926769 0.987096012857603 0.8675697495655436 0.17649799435945301 0.08416857899680791 0.949728968439017 1.9459518762348351 0.08524362525150939 0.030420840939451726 2.7546321610707678e-08 7.559936386315946 -0.1195262632920594 KGAGDGS(ph)DEEVDGK ddPTM_KYSE-520_SHP099_60min_R1 27 KGAGDGSDEEVDGK 14 1 P35579;P35579-2 P35579 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK;KGAGDGS(1)DEEVDGK 231.38 8.533900000000001e-19 422829030000.0 154799060.0 131036860.0 121707130.0 135614610.0 139521130.0 134192340.0 142228220.0 151346410.0 147263510.0 137912280.0 True False 146212047.55752456 124741652.55526322 129552566.33809325 148503381.76038057 150500649.1643615 133354795.82993901 156606036.4912616 150821424.62822762 120524168.79498608 136690484.4933301 1.0696578338974216 0.9125847568515282 0.9477804312297603 1.0864207725273436 1.101032377800265 0.9755967748906922 1.1456981593982374 1.1033791063604508 0.8817304967623196 1.0 27.026337574448874 -5.255340814088339 24.496494021786148 1.0503033120188083 0.9702653793259282 0.11222820277061352 0.08126186103926196 692.2612420528344 2780637.6250846526 0.021903355117762847 0.036759191061208 5.554681806212978e-06 5.255340814088339 -0.08003793269288018 KGAGDGS(ph)DEEVDGKADGAEAK ddPTM_KYSE-520_SHP099_60min_R1 7 KGAGDGSDEEVDGKADGAEAK 21 2 P35579;P35579-2 P35579 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK;KGAGDGS(1)DEEVDGKADGAEAK 220.96 2.8039000000000003e-19 22452570000.0 20170990.0 17829710.0 17066820.0 19183190.0 19706850.0 18607460.0 18962940.0 19511950.0 21097790.0 18598830.0 True False 19052064.974828307 16973143.96865968 18166974.525077518 21006354.609963607 21257666.978361636 18491323.940053187 20879899.03565977 19444267.59957337 17266963.168005224 18434058.835870795 1.0335252341581407 0.9207491480732217 0.9855113671291122 1.1395403908057073 1.1531734366061797 1.0031064837479502 1.132680503060434 1.0548012118599086 0.9366880794806556 1.0 24.135870424690822 -5.086588851807307 8.894259857346722 1.0666974801291615 0.9711990344519025 0.21088824916190763 0.07007578089659118 0.48728895715312165 46.547015198685 0.019181588254807345 0.033350358949727994 8.192399986670733e-06 5.086588851807307 -0.09549844567725907 KGAGDGS(ph)DEEVDGKADGAEAKPAE ddPTM_KYSE-520_SHP099_60min_R1 21 KGAGDGSDEEVDGKADGAEAKPAE 24 3 P35579;P35579-2 P35579 MYH9 Myosin-9 1 KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE;KGAGDGS(1)DEEVDGKADGAEAKPAE 204.58 9.604900000000002e-16 410189560000.0 59773707.0 57735082.0 55056767.0 49301487.0 53463616.0 47934308.0 45736925.0 47036541.0 65795374.0 48104485.0 True False 56457940.316779256 54961401.9985951 58605814.29476183 53987085.50144742 57670898.41283637 47635132.203443214 50360459.72837246 46873382.21768216 53848592.6480039 47678316.68762298 1.1841429026674386 1.1527546653689384 1.2291921855952512 1.1323194536241283 1.2095833582104507 0.999094253170415 1.0562549860625796 0.9831173890803537 1.129414719080942 1.0 25.506829965672516 -6.260209418604933 24.991529593427515 1.033938523644952 1.1799024475089879 0.7238456492863627 0.04570779775567308 57.04137904683327 1159033.9260759281 0.014421009257072012 0.013672592849357236 5.492759468428944e-07 6.260209418604933 0.14596392386403578 KGAILSEEELAAMS(ph)PTAAAVAK ddPTM_KYSE-520_SHP099_60min_R1 2 KGAILSEEELAAMSPTAAAVAK 22 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 KGAILSEEELAAMS(1)PTAAAVAK;KGAILSEEELAAMS(1)PTAAAVAK 240.44 4.064199999999999e-27 1852030000.0 2911250.0 3488400.0 2637990.0 1857220.0 2106800.0 2751000.0 2028590.0 2541620.0 3685800.0 3161400.0 True False 2749757.1590670045 3320812.0278048487 2808039.0563332336 2033729.6304064468 2272593.173947751 2733829.9885683656 2233659.674330515 2532803.7134385696 3016551.6314568385 3133392.4555319804 0.8775655134460828 1.0598136284977582 0.8961657679923439 0.6490504012084132 0.7252820086215198 0.8724824698361068 0.7128566580885857 0.8083263585341581 0.9627110788918699 1.0 21.57929404704162 -5.003968811185817 24.930785121227245 0.8021650198442835 0.9710146390881836 0.21957523490906783 0.11128579839960503 200.65139050663197 1260460.3943820433 0.028642982575204687 0.05755946575938557 9.909031039435356e-06 5.003968811185817 0.16884961924390018 KGCQS(ph)LPSNMMETSIDEGLETEGEAEEDPAHAFEAFQSTR ddPTM_KYSE-520_SHP099_60min_R1 1 KGCQSLPSNMMETSIDEGLETEGEAEEDPAHAFEAFQSTR 40 1 Q9H0K1 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 1 KGCQS(0.991)LPS(0.009)NMMETSIDEGLETEGEAEEDPAHAFEAFQSTR 139.19 4.446e-07 31875000.0 5287.3 7011.2 5941.1 7174.2 5292.8 6935.9 5056.2 5716.7 7557.5 5788.9 True False 4994.002929028759 6674.371427974246 6324.0728120960985 7856.033810998113 5709.313248087458 6892.610475358531 5567.330039756648 5696.870101987811 6185.248509071311 5737.6148496960495 0.8703970307963974 1.1632658522430834 1.1022128493743557 1.3692159576403575 0.9950673577174511 1.2013023975848898 0.9703213243830017 0.9928986610681271 1.0780173767500227 1.0 12.486235411868897 -6.773290842375346 24.997198056317103 1.009717553888602 1.1242793852873818 0.14754659211202759 0.1247716343363361 425.9536845720393 898416.2785516494 0.05114975232893156 0.03479331881925419 1.6854239369550262e-07 6.773290842375346 0.11456183139877973 KGDDS(ph)DEEDLCISNK ddPTM_KYSE-520_SHP099_60min_R1 4 KGDDSDEEDLCISNK 15 1 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 KGDDS(1)DEEDLCISNK;KGDDS(1)DEEDLCISNK;KGDDS(1)DEEDLCISNK;KGDDS(1)DEEDLCISNK 246.22 3.9613e-19 2289380000.0 4633100.0 3938380.0 3702430.0 4002420.0 4413380.0 3842510.0 3886970.0 4416110.0 5171770.0 4080760.0 True False 4376092.707144127 3749174.313171099 3941094.561897453 4382808.793428545 4760687.897302793 3818527.469783291 4279902.860771509 4400791.545137819 4232706.937712174 4044607.641183237 1.0819572861865818 0.9269562453959787 0.9744071394634705 1.083617789968465 1.1770456666372884 0.9441033120004177 1.0581750420467082 1.088063895327652 1.046506191259113 1.0 21.9475683259784 -5.256877126887798 24.877691634349112 1.060830150826826 0.9876918220838774 0.14937381922294368 0.06712373604767642 606.0653230732887 3304819.614670897 0.018375003592404775 0.03051511330861267 5.535066883852205e-06 5.256877126887798 -0.07313832874294868 KGDIFLVR ddPTM_KYSE-520_SHP099_60min_R1 2 KGDIFLVR 8 1 P55072;C9JUP7;C9IZA5 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ; 116.3 0.0024530999999999997 2824600000.0 6725600.0 5646200.0 3781600.0 3735300.0 6355900.0 5330900.0 4261700.0 4931000.0 4349800.0 4460400.0 False True 6352517.56084879 5374948.076881012 4025367.9867739337 4090301.788941109 6856073.16987589 5297627.875703048 4692514.2261838745 4913895.511904046 3559985.9695346905 4420884.326138687 1.4369336748508053 1.2158083497234655 0.9105345649904829 0.92522253178103 1.5508374940595107 1.1983185907807117 1.0614424354962564 1.1115186802899155 0.805265577406336 1.0 22.0759035555299 -7.400146725003024 1.8394187205904247 0.9166503005926543 1.1886087482856464 0.2378562981852116 0.19523568597839583 0.6062136815312733 3.6972330612996536 0.16959308859007785 0.06014812612971745 3.979726940354945e-08 7.400146725003024 0.27195844769299216 KGDIVDIK ddPTM_KYSE-520_SHP099_60min_R1 2 KGDIVDIK 8 1 P46778;M0R181;G3V1B3 P46778 RPL21 60S ribosomal protein L21 0 ; 84.17 0.015189 2967600000.0 4257200.0 4117100.0 2558050.0 2599390.0 4240700.0 4560900.0 3019600.0 3982200.0 3661100.0 3659650.0 False True 4021044.6294822 3919308.3361069085 2722945.996024711 2846435.2440648987 4574418.963717593 4532433.731320049 3324850.6364560663 3968386.677652467 2996336.528820507 3627228.348164619 1.1085722329879928 1.0805242901484498 0.7506960507194217 0.7847411221036574 1.2611334398156249 1.2495584220975402 0.9166367036523753 1.0940548255420628 0.8260677964585981 1.0 21.79043614076824 -4.547669478292783 24.99935371761505 0.9928670176734237 1.101560987027937 0.06265148625928363 0.16846143963632496 657.2066943199903 662735.6061773327 0.04627282463722929 0.12243805544818066 2.8335476591956417e-05 4.547669478292783 0.10869396935451336 KGDPDPFDDRHPGR ddPTM_KYSE-520_SHP099_60min_R1 1 KGDPDPFDDRHPGR 14 2 Q9Y4B6;Q9Y4B6-2;Q9Y4B6-3 Q9Y4B6 VPRBP Protein VPRBP 0 108.89 0.00035833 649670000.0 718760.0 788440.0 540450.0 506690.0 713720.0 798520.0 574900.0 691350.0 695160.0 492400.0 False True 678888.9499874619 750562.1589274328 575288.2717505746 554845.6652580966 769885.7034886974 793536.1404840465 633016.5024833069 688951.8682123038 568936.4675575272 488037.7190814034 1.3910583617702406 1.5379183402876306 1.178778297778697 1.13689094831121 1.5775127072919595 1.6259729718794274 1.2970647098236303 1.4116775021182093 1.1657633115497579 1.0 18.896633128431446 -7.943248287540576 2.8552766383823016 1.0007689685889953 1.3953070325917853 0.42051890244562073 0.15216321032685015 0.247895740454741 4.391468447439384 0.15662085105846002 0.04228966664010771 1.1395980894272594e-08 7.943248287540576 0.39453806400279 KGDQCEFLHEYDMTK ddPTM_KYSE-520_SHP099_60min_R1 1 KGDQCEFLHEYDMTK 15 1 O95639;C9K0K2;B7Z7B0;C9JEV9;H7C016;O95639-3;O95639-2 O95639 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 0 90.561 0.0045552 281860000.0 272730.0 231050.0 146610.0 169210.0 238970.0 241670.0 164200.0 188250.0 184800.0 183950.0 False True 257601.12322622412 219950.0111868794 156060.7151842941 185291.6675251584 257775.57944669345 240161.6478870655 180798.93843757 187597.00468788052 151244.9784288957 182320.34611093433 1.4129038734354122 1.2063931200144222 0.8559698273572696 1.016297256327147 1.4138607398751193 1.317250943243258 0.9916553050396327 1.0289416880205764 0.8295562270207048 1.0 17.476116042919962 -6.88398432995342 6.9861254431482545 0.9596362906805656 1.1886737647685874 0.33053447264674485 0.1678602673526702 0.319593253457698 18.243628661158727 0.07807287996024348 0.05249041632110537 1.3062180177380664e-07 6.88398432995342 0.2290374740880219 KGDRS(ph)PEPGQTWTR ddPTM_KYSE-520_SHP099_60min_R1 10 KGDRSPEPGQTWTR 14 2 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 KGDRS(1)PEPGQTWTR;KGDRS(0.947)PEPGQT(0.004)WT(0.048)R;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(1)PEPGQTWTR;KGDRS(0.436)PEPGQT(0.435)WT(0.129)R;KGDRS(1)PEPGQTWTR;KGDRS(0.943)PEPGQT(0.056)WTR;KGDRS(0.808)PEPGQT(0.183)WT(0.009)R;KGDRS(0.901)PEPGQT(0.088)WT(0.012)R 201.9 1.9545000000000002e-11 216994400000.0 21592010.0 21061120.0 20652750.0 20576400.0 21719730.0 19899440.0 21827370.0 23658180.0 31601170.0 20528660.0 True False 20394258.16269517 20049312.181814384 21984059.31056839 22531974.86947973 23428949.182641067 19775240.21363754 24033893.574202564 23576115.29544075 25863194.12866811 20346792.043455813 1.0023328551811992 0.9853795202208739 1.0804680788802368 1.1073969214093748 1.1514812326484938 0.9719094868322447 1.1812129166539864 1.1587141228498274 1.2711190085115434 1.0 24.278298015566886 -4.599374462905599 0.5712287050950907 1.142362718598821 0.9126027717093284 0.25032744889170755 0.08245257519533312 3.7189430434856776 1.2072995350530955 0.0471606920693754 0.5387582567544986 2.5155070399813856e-05 4.599374462905599 -0.22975994688949264 KGDRSPEPGQT(ph)WTR ddPTM_KYSE-520_SHP099_60min_R1 1 KGDRSPEPGQTWTR 14 2 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 KGDRS(0.215)PEPGQT(0.392)WT(0.392)R 110.29 0.0034584000000000004 2975000000.0 804980.0 835620.0 810500.0 767790.0 838890.0 770710.0 852320.0 908470.0 1193200.0 852950.0 True False 760326.1547121532 795475.5609088087 862746.1268458519 840760.530755519 904905.870368819 765899.7130096415 938480.8234415936 905318.729608491 976544.9581242325 845393.526585058 0.8993754160662528 0.9409529833072044 1.0205260623781793 0.9945197169320024 1.0703960249425606 0.9059682726735212 1.1101112013863639 1.070884388322086 1.1551365457799954 1.0 19.689263539727932 -2.637363125341244 0.3466407189314201 1.0750186498928984 0.3863767230960579 0.4053617089517124 0.06276959719633002 19.714128688225003 0.7770416405812152 0.05550147081203668 7.128935626841326 0.002304819261227289 2.637363125341244 -0.6886419267968404 KGDRSPEPGQTWT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 KGDRSPEPGQTWTR 14 2 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 KGDRS(0.021)PEPGQT(0.008)WT(0.971)R 100.22 0.026532 812080000.0 803260.0 784410.0 751620.0 693500.0 862100.0 756960.0 835880.0 858140.0 1171900.0 767500.0 True False 758701.5665408893 746725.7661765862 800070.6278345196 759410.0314916221 929942.3653219853 752235.5318599447 920378.9078026563 855163.3126313818 959112.5011949292 760700.5471059646 0.9973721846623086 0.9816290641796636 1.05175503143561 0.9983035169104949 1.2224815255620496 0.9888720794559377 1.2099096172655293 1.1241786480695914 1.2608279366221176 1.0 19.536969117091893 -5.73817458859843 24.982550625349955 1.1370884941939563 1.0086116144346506 0.3508431667441275 0.08465008673551679 254.69604749882413 273500.2564594873 0.023721184599218306 0.03060399115574504 1.8273654582230635e-06 5.73817458859843 -0.12847687975930566 KGDS(ph)SAEELK ddPTM_KYSE-520_SHP099_60min_R1 6 KGDSSAEELK 10 1 P26373;P26373-2 P26373 RPL13 60S ribosomal protein L13 1 KGDS(0.5)S(0.5)AEELK;KGDS(0.5)S(0.5)AEELK;KGDS(0.609)S(0.391)AEELK;KGDS(0.628)S(0.372)AEELK;KGDS(0.5)S(0.5)AEELK;KGDS(0.633)S(0.367)AEELK 107.37 0.00089336 3472070000.0 6745260.0 5997020.0 5531010.0 5640340.0 6449710.0 6243880.0 5772490.0 6216690.0 7191470.0 5948820.0 True False 6371086.981457561 5708914.157489458 5887547.754528894 6176396.217769948 6957265.483169994 6204909.628870309 6356029.6232733745 6195125.753376346 5885680.330205892 5896118.082911924 1.080556205263627 0.9682496308944322 0.9985464455998823 1.0475360450582432 1.1799739057692005 1.0523720084326875 1.0780024303947306 1.050712632660971 0.9982297246155427 1.0 22.491333987231638 -3.915996010524784 20.22493505303735 1.0463769900913993 2.7896347114876687 0.03520286122484717 0.05636046081321869 7890366.6456939615 9195627.160500944 0.015012224426108974 631037756.9957582 0.00012133999968349683 3.915996010524784 1.7432577213962694 KGDSEAEALSEIKDGS(ph)LPPELSCIPSHR ddPTM_KYSE-520_SHP099_60min_R1 1 KGDSEAEALSEIKDGSLPPELSCIPSHR 28 2 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 KGDSEAEALS(0.001)EIKDGS(0.999)LPPELSCIPSHR 106.21 0.00076762 57903000.0 93923.0 69957.0 61933.0 102040.0 86181.0 67472.0 81168.0 94485.0 95323.0 70298.0 True False 88712.9039591413 66596.16071240217 65925.3002763036 111737.85092055533 92962.95439718582 67050.88222053235 89373.25356334161 94157.25358796475 78014.74609728153 69675.2144110164 1.2732347465171898 0.9558084790317144 0.9461800847487613 1.603695831654138 1.3342327710510409 0.9623347812752607 1.2827122861240992 1.3513737185296337 1.1196915109162056 1.0 16.088357916480028 KGDSS(ph)AEELK ddPTM_KYSE-520_SHP099_60min_R1 3 KGDSSAEELK 10 1 P26373;P26373-2 P26373 RPL13 60S ribosomal protein L13 1 KGDS(0.113)S(0.887)AEELK;KGDS(0.189)S(0.811)AEELK;KGDS(0.244)S(0.756)AEELK 142.1 0.0002399 2993490000.0 5430980.0 4733450.0 4242910.0 4090920.0 4791260.0 4678910.0 4072690.0 4619840.0 5200610.0 4316600.0 True False 5129712.713009785 4506047.956946703 4516414.767496031 4479719.80682005 5168304.903459702 4649707.187136459 4484397.2508240435 4603814.853318761 4256310.320709405 4278358.282263982 1.1989909153413143 1.0532189357835253 1.0556420172239704 1.0470651383711402 1.208011242276041 1.0867970563409595 1.0481584184789292 1.0760704339334939 0.9948466303895169 1.0 22.028625872397924 -7.4681189629594655 1.1954534490744857 0.9958720328929545 1.103190779696265 0.3506260274811712 0.05557956244577131 0.590231968786229 1.5016680534305746 0.05159711841935086 0.018148904148366663 3.403149570639494e-08 7.4681189629594655 0.10731874680331055 KGDSSAEELK ddPTM_KYSE-520_SHP099_60min_R1 8 KGDSSAEELK 10 1 P26373;P26373-2 P26373 RPL13 60S ribosomal protein L13 0 ;;;;;;; 147.58 0.00043784 13513830000.0 12920830.0 13184790.0 8172460.0 7689210.0 11118990.0 13545890.0 9045890.0 12209640.0 11701490.0 11025880.0 False True 12204085.802863969 12551372.897626728 8699269.847998321 8419990.206554716 11993991.254600978 13461345.075917244 9960336.840578744 12167287.608591396 9576794.386558097 10928199.28120484 1.1167517620083574 1.148530748264588 0.7960387273464162 0.7704828572293758 1.0975267695958995 1.2317990118526758 0.9114344078360009 1.1133844923122547 0.8763378247529771 1.0 23.381552361461015 KGDVEGS(ph)QSQDEGEGSGESER ddPTM_KYSE-520_SHP099_60min_R1 1 KGDVEGSQSQDEGEGSGESER 21 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 KGDVEGS(0.631)QS(0.364)QDEGEGS(0.005)GESER 65.071 0.013034 1010400000.0 6754.7 7509.6 6793.0 6930.5 7608.1 9278.4 6582.4 9234.0 10197.0 8305.0 True False 6380.003325839381 7148.827543860597 7230.88764918429 7589.172636269197 8206.81418583249 9220.490063952273 7247.813230033263 9201.969409231797 8345.481845451566 8231.424161192228 0.7750789171961843 0.8684800350301922 0.8784491611153931 0.9219756493717112 0.9970102408917568 1.1201573243452916 0.8805053764819598 1.1179073303761078 1.0138563730924077 1.0 13.006926345022002 -5.2139569103555585 0.939914291780607 1.0307721666005436 0.790095959847163 0.614547920883149 0.06610563803676725 0.4810286005757907 0.7605365368234208 0.026074784078913955 0.08761328311384797 6.1100264409769315e-06 5.2139569103555585 -0.24067620675338064 KGDVEGSQS(ph)QDEGEGS(ph)GESER ddPTM_KYSE-520_SHP099_60min_R1 1 KGDVEGSQSQDEGEGSGESER 21 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 2 KGDVEGS(0.321)QS(0.687)QDEGEGS(0.991)GES(0.001)ER 75.226 0.0076652000000000005 24120000.0 35954.0 29927.0 25691.0 28663.0 29514.0 32090.0 29290.0 29371.0 31835.0 26913.0 True False 33959.55994747794 28489.261998657203 27347.082967053397 31387.122902154802 31836.583888311157 31889.714406818905 32250.91904285281 29269.11885624295 26054.5664950427 26674.57175799716 1.273106097281457 1.0680307169361019 1.0252116965609621 1.1766682961927888 1.1935180882057235 1.1955098921975464 1.2090510518949131 1.0972666823589372 0.9767566929066601 1.0 14.703177489303062 -7.615491067852601 3.810294960461853 0.9892567065414273 1.1570069807474992 0.5121671610490481 0.06727919723174605 0.20579076790494863 5.542275935181206 0.056024915695700506 0.018722884460697527 2.423867815802733e-08 7.615491067852601 0.16775027420607191 KGDVEGSQS(ph)QDEGEGSGESER ddPTM_KYSE-520_SHP099_60min_R1 11 KGDVEGSQSQDEGEGSGESER 21 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 KGDVEGSQS(1)QDEGEGSGESER;KGDVEGSQS(1)QDEGEGSGESER;KGDVEGS(0.001)QS(0.999)QDEGEGSGESER;KGDVEGSQS(1)QDEGEGSGESER;KGDVEGS(0.003)QS(0.997)QDEGEGSGESER;KGDVEGSQS(1)QDEGEGSGESER;KGDVEGSQS(1)QDEGEGSGESER;KGDVEGSQS(1)QDEGEGSGESER;KGDVEGSQS(1)QDEGEGSGESER;KGDVEGSQS(1)QDEGEGSGESER;KGDVEGSQS(1)QDEGEGSGESER 301.15 8.4802e-45 33652010000.0 15458018.0 13867036.0 13530550.0 13478884.0 13970264.0 14019547.0 13627659.0 14063416.0 16815746.0 13460682.0 True False 14600530.926745092 13200842.775714621 14402750.902645431 14759913.082785772 15069644.296871075 13932045.806886103 15005275.764855055 14014633.292321973 13762430.416860335 13341430.829732144 1.0943751920676283 0.9894622956254276 1.0795506933595214 1.1063215985719057 1.12953734042435 1.0442692380368783 1.1247126306284134 1.0504595399984804 1.0315558048084295 1.0 23.669410063887145 -7.7958040465941485 2.24180618594889 1.0034583531274508 1.0791661693947587 0.31416829753035613 0.039022815338335105 0.36972780855618015 3.6003445259187004 0.03788013607747806 0.010781845786180001 1.60027991106764e-08 7.7958040465941485 0.07570781626730794 KGDVEGSQSQDEGEGS(ph)GESER ddPTM_KYSE-520_SHP099_60min_R1 2 KGDVEGSQSQDEGEGSGESER 21 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 1 KGDVEGSQSQDEGEGS(0.992)GES(0.008)ER;KGDVEGSQSQDEGEGS(0.996)GES(0.004)ER 103.9 0.00049182 61642000.0 55736.0 44711.0 42419.0 43792.0 47393.0 47169.0 38120.0 44409.0 55461.0 42776.0 True False 52644.212973038586 42563.0164474208 45153.39661279969 47953.97851345511 51122.559470716624 46874.60077454786 41973.5416153482 44254.95554413852 45390.68045803561 42397.0379192244 1.2416955418757625 1.0039148614229283 1.0650130015881476 1.1310690762127744 1.2058049802468807 1.1056102755068453 0.99001118180277 1.0438218733217601 1.07060970968101 1.0 15.371675853570881 -6.642559373660526 6.49525622017463 1.030256053728696 1.1224443107834474 0.3565826742386151 0.06556604414090775 0.2803146111655357 14.835010250522423 0.025997127322820317 0.02000866984266943 2.2774068696630244e-07 6.642559373660526 0.09218825705475142 KGDVVHCWYTGTLQDGTVFDTNIQTSAK ddPTM_KYSE-520_SHP099_60min_R1 1 KGDVVHCWYTGTLQDGTVFDTNIQTSAK 28 1 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 0 191.69 4.5411e-15 254990000.0 66689.0 73293.0 80031.0 78106.0 94488.0 75234.0 72211.0 72953.0 77583.0 40561.0 False True 62989.62822877435 69771.8942649641 85189.92631412754 85529.1707565749 101923.6680368214 74764.43669936476 79510.79259144563 72699.94307035813 63495.882908273925 40201.66109598051 1.5668414317106976 1.7355475461171954 2.1190648344290706 2.127503402219526 2.535309866761004 1.8597350124629537 1.9777986885073107 1.8083815715173746 1.5794343113504443 1.0 15.294967493028857 -8.066955812040373 1.1963391301021427 1.0029581437468018 2.011352466421546 0.6077122946193598 0.24439443844178305 0.40330180662097265 1.2732807648685713 0.2528032152434681 0.07904202422849722 8.571250502996405e-09 8.066955812040373 1.008394322674744 KGDYIEAESSYSR ddPTM_KYSE-520_SHP099_60min_R1 1 KGDYIEAESSYSR 13 1 Q99614 Q99614 TTC1 Tetratricopeptide repeat protein 1 0 113.4 0.00034930000000000003 457950000.0 441180.0 444360.0 370410.0 261200.0 444050.0 359830.0 326870.0 398020.0 429040.0 345350.0 False True 416706.8659294737 423012.2786020422 394287.22127695516 286024.3694673567 478994.20870111056 357584.1674978389 359913.20954377926 396639.3615185665 351137.1512182546 342290.46767823456 1.217407159352136 1.2358283929767189 1.1519082723846095 0.8356188573040543 1.399379339863424 1.0446804724751522 1.0514847579165152 1.158780039096566 1.0258455445751304 1.0 18.384861590258627 -1.0000000000000002 0.36768739927009186 1.0695088148321947 3.343490441867582 0.13218056345343243 0.1373420798435746 146.08766665548808 2.0265291830935928 0.10835722374466204 234.1049040987884 0.09999999999999995 1.0000000000000002 2.273981627035387 KGEDEDKGPPCGPVNCNEK ddPTM_KYSE-520_SHP099_60min_R1 2 KGEDEDKGPPCGPVNCNEK 19 2 H0YLU2;Q06323-3;Q06323;Q06323-2 H0YLU2 PSME1 Proteasome activator complex subunit 1 0 ; 123.19 1.6535e-05 1280030000.0 572020.0 532850.0 407920.0 315090.0 480950.0 545140.0 391310.0 502890.0 433900.0 470980.0 False True 540288.910306401 507251.0861758437 434215.1758950764 345036.05886473705 518798.0287688301 541737.5790505847 430867.4336175739 501145.5919654085 355114.69772888435 466807.4836168953 1.1574127006708643 1.0866387193401128 0.9301804087002018 0.7391399473533399 1.1113747036553574 1.1605160543980992 0.9230088392738427 1.0735594641338144 0.7607305156665479 1.0 18.83246816421052 -4.599009174501915 4.3713036343868135 0.9684292717153749 1.1431122507817435 0.20106068936972388 0.13003245639172473 0.33191205412512736 11.714696864896128 0.034534876003505806 0.10402786384177105 2.51762374221591e-05 4.599009174501915 0.17468297906636865 KGEDFVK ddPTM_KYSE-520_SHP099_60min_R1 4 KGEDFVK 7 1 G3XAL0;P40926-2;P40926 G3XAL0 MDH2 Malate dehydrogenase;Malate dehydrogenase, mitochondrial 0 ;;; 96.367 0.014762 3075950000.0 8138480.0 8646790.0 5140500.0 4878800.0 8439100.0 8630460.0 6544940.0 7122540.0 7689290.0 6966500.0 False True 7687022.290742347 8231385.229303595 5471864.855090805 5342479.6851352975 9103209.158089269 8576594.097833421 7206566.407658898 7097833.571153328 6293108.767226848 6904782.229854992 1.1132896063694948 1.192128144709998 0.7924746462577026 0.773736159561327 1.3183919282390528 1.2421237647075714 1.0437065453706922 1.027959077472946 0.911413069628267 1.0 22.71916448332052 -7.553402527197888 3.9854792921005817 0.956144685086101 1.0659174191577943 0.06578711422969208 0.16665740628220274 0.744780022189252 25.964939583104538 0.1338134328256301 0.048109640710992746 2.796388276920876e-08 7.553402527197888 0.1097727340716933 KGEDKT(ph)T(ph)QK ddPTM_KYSE-520_SHP099_60min_R1 1 KGEDKTTQK 9 2 Q14093 Q14093 CYLC2 Cylicin-2 2 KGEDKT(1)T(1)QK 52.928000000000004 0.050628 319330000.0 403920.0 179730.0 202090.0 262720.0 167600.0 295820.0 228000.0 243510.0 209470.0 294300.0 True False 381513.75240544253 171095.50101977002 215117.04475543275 287688.8298103517 180789.16648644552 293973.67765114247 251048.46506556618 242665.32064566153 171435.52830898666 291692.7309619351 1.3079302701417976 0.5865607293522078 0.7374782499585317 0.9862735655483101 0.6197931840476267 1.0078196898554355 0.8606606830333634 0.8319210418628105 0.5877264330298254 1.0 18.154089908887382 -4.245184893776832 24.502434416685723 0.8030827282246451 1.3079307806084715 0.4799712302496463 0.1579742182258315 2113.85400997773 3186413.5562108597 0.03784652420670452 0.9637065843195071 5.6861080255156047e-05 4.245184893776832 0.5048480523838264 KGEIFELK ddPTM_KYSE-520_SHP099_60min_R1 2 KGEIFELK 8 1 P63010-2;A0A087WYD1;A0A087X253;A0A087WU93;P63010;A0A087WZQ6;K7EKZ5;C9J1E7;K7ERB2;A0A087WXS3;K7EJX1;Q10567-4;Q10567-3;Q10567-2;Q10567;K7EN71 P63010-2 AP2B1;AP1B1 AP-2 complex subunit beta;AP-1 complex subunit beta-1 0 ; 87.29799999999999 0.011937 1910570000.0 2745600.0 2558500.0 1838700.0 1678840.0 2612300.0 2707900.0 1912640.0 2101390.0 2249600.0 2181380.0 False True 2593296.0947820903 2435585.8196132076 1957225.5440240197 1838396.448838348 2817873.148046192 2690998.991655495 2105988.316767562 2094100.768558114 1841129.3478011033 2162054.670287961 1.199459074934813 1.1265144462275856 0.9052618191950436 0.850300630276613 1.3033311260676324 1.2446489113511106 0.9740680222887558 0.9685697578957166 0.8515646588880593 1.0 21.043971573227505 -6.977553210274854 24.768422795790283 0.9403040514171731 1.0955280861361056 0.24112356182902772 0.13629230445328758 352.5070985693684 388965.3561341607 0.06306010541995997 0.042511932111906084 1.0530446589453542e-07 6.977553210274854 0.15522403471893254 KGEISELLVGS(ph)PSIR ddPTM_KYSE-520_SHP099_60min_R1 1 KGEISELLVGSPSIR 15 1 Q9NW68-9;Q9NW68-4;Q9NW68-8;Q9NW68;Q9NW68-7;Q9NW68-3;E9PS77;E9PQA7;Q9NW68-2 Q9NW68-9 BSDC1 BSD domain-containing protein 1 1 KGEISELLVGS(0.97)PS(0.03)IR 82.36 0.0040061 30468000.0 88790.0 79340.0 76046.0 70588.0 78684.0 79372.0 76189.0 81899.0 91947.0 72295.0 True False 83864.64170152326 75528.38730823215 80948.04683790206 77296.6622969439 84875.98314928095 78876.60990645162 83890.92765298436 81614.9114843703 75251.7425952471 71654.52254465895 1.1704026308912228 1.0540630880787574 1.1296990610390418 1.0787408742939912 1.1845167637029703 1.1007903912455976 1.170769473771862 1.1390057261703683 1.0502022750670925 1.0 16.128770144006758 -7.935622905939439 3.6681990260080686 1.0009554324632686 1.1266054989919405 0.5366712666384471 0.03965677176526549 0.1504909852319534 4.065952402928327 0.0367240200986679 0.009725932941860221 1.1597839492374817e-08 7.935622905939439 0.12565006652867194 KGEITGEVR ddPTM_KYSE-520_SHP099_60min_R1 6 KGEITGEVR 9 1 Q60FE5;P21333-2;P21333;A0A087WWY3;H0Y5F3 Q60FE5 FLNA Filamin-A 0 ;;;;; 118.4 0.0019425999999999998 5255310000.0 20293200.0 18744000.0 13625150.0 12451850.0 18752700.0 18631150.0 13727740.0 17721450.0 16648610.0 16338070.0 False True 19167495.742508728 17843510.104682382 14503448.9700108 13635270.0802148 20228430.80173248 18514866.08197582 15115473.929031482 17659978.426167518 13625642.101304645 16193327.410626115 1.183666287753248 1.1019051027754438 0.8956435328105321 0.8420301605998092 1.2491830918245077 1.1433639061621335 0.9334384185372957 1.0905713185653851 0.8414355960198429 1.0 23.948896125798747 -4.530626992435234 23.822380479030883 1.00810442707048 1.16322606252959 0.1828549705911353 0.12541130284763968 154.24012140166096 474221.99602597125 0.03324003396322028 0.08839704810637368 2.9469516298621293e-05 4.530626992435234 0.15512163545911006 KGEMPVSGLAVGSTLPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 KGEMPVSGLAVGSTLPSPR 19 1 Q3T8J9-3 Q3T8J9-3 GON4L GON-4-like protein 1 KGEMPVSGLAVGS(0.011)T(0.033)LPS(0.956)PR 169.44 5.2912e-09 213550000.0 214690.0 216980.0 199900.0 169650.0 192640.0 225840.0 185460.0 215230.0 269290.0 210410.0 True False 202780.7177260953 206555.9551063803 212785.87385130874 185773.4849928678 207799.67202833426 224430.44878890566 204208.10671517494 214483.4173650595 220393.7242484701 208545.93109650296 0.9723551865045026 0.9904578527154203 1.020330978084841 0.8908036901803786 0.996421608111724 1.0761679578636913 0.9791996690680064 1.0284708804306952 1.0568114328084621 1.0 17.670005638765783 -6.003040065172308 24.971990837416065 1.0279005556847114 0.969991081308811 0.3375224909615786 0.03942759111410038 148.1259637664013 1216765.604772442 0.012302335717810605 0.013676266857566356 9.930244342467671e-07 6.003040065172308 -0.05790947437590044 KGEPVSAEDLGVSGALTVLMK ddPTM_KYSE-520_SHP099_60min_R1 2 KGEPVSAEDLGVSGALTVLMK 21 1 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586;A0A494C1T2 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 0 ; 132.45 3.0655e-05 130161000.0 322596.0 165509.0 158210.0 248000.0 291459.0 170700.0 134593.0 208734.0 210753.0 137800.0 False True 304700.9568008175 157557.69920592615 168408.46974495007 271569.84543608106 314395.1651251369 169634.59798205007 148198.9739410956 208009.95047288202 172485.56785078484 136579.19920677762 2.2309470151417976 1.1535995240928862 1.2330462524530086 1.988368997719271 2.3019256735364966 1.2420236680786756 1.0850771918550053 1.522998755893714 1.2628977827703165 1.0 17.05937825465128 -6.410984913166417 21.56844194549711 1.2464644701810235 1.7321553914497383 0.35588585089123514 0.37235536068511654 11.837792600984853 2260.1228364851017 0.13912961730902632 0.12270062282144623 3.8816385007100454e-07 6.410984913166417 0.4856909212687148 KGEQGGPPPKAS(ph)PSTAGETPSGVK ddPTM_KYSE-520_SHP099_60min_R1 3 KGEQGGPPPKASPSTAGETPSGVK 24 2 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 KGEQGGPPPKAS(0.976)PS(0.024)TAGETPSGVK;KGEQGGPPPKAS(0.494)PS(0.494)T(0.012)AGETPSGVK;KGEQGGPPPKAS(0.998)PS(0.002)TAGETPSGVK 249.13 6.8341e-29 7776500000.0 3219010.0 2948620.0 2632970.0 2130600.0 2338070.0 2871550.0 2219020.0 2834120.0 3226070.0 2789490.0 True False 3040445.098362653 2806963.869231149 2802695.4591009505 2333091.5834117513 2522062.8072014498 2853627.5913026114 2443340.197148215 2824289.099208578 2640297.0106066386 2764777.288790382 1.099707058029574 1.0152585818075872 1.0137147286561943 0.8438623945845932 0.9122119229736865 1.0321365134444889 0.8837385228295191 1.0215249925046344 0.9549763813930182 1.0 21.39873184099633 -4.567498441586283 1.8623563260616218 0.9507233249646039 1.1002751439424776 0.37112738462705497 0.05855489902412131 0.5029810417836662 2.7851735466064973 0.016399401476665732 0.10657285821694366 2.707082917946655e-05 4.567498441586283 0.14955181897787373 KGEQGGPPPKASPS(ph)TAGETPSGVK ddPTM_KYSE-520_SHP099_60min_R1 1 KGEQGGPPPKASPSTAGETPSGVK 24 2 A0A087WW69;F8W8L6;A0A087WTA5;E7ERK9;Q9UI10-3;Q9UI10;Q9UI10-2 A0A087WW69 EIF2B4 Translation initiation factor eIF-2B subunit delta 1 KGEQGGPPPKAS(0.124)PS(0.751)T(0.124)AGETPSGVK 95.823 0.0018618999999999999 5482800000.0 682160.0 608530.0 552900.0 479840.0 512640.0 619630.0 402690.0 618000.0 628630.0 536300.0 True False 644319.2249477545 579295.3053778484 588540.8186712783 525443.8493308432 552981.8514773955 615762.6593299219 443397.8350756706 615856.3022422851 514486.63847270975 531548.7992350868 1.2121544171954626 1.0898252544478892 1.1072187906702162 0.9885147893983981 1.0403218900562874 1.158431098360153 0.8341620481764462 1.1586072682856572 0.96790104542249 1.0 19.01984261997059 -1.0000000002303837 0.5941111773690751 1.021562214442938 12.467133123354113 0.2947434059474098 0.0896974143099702 211.6441313688609 1.6760961484479382 0.03869518327723502 3138.5169295667156 0.09999999994695219 1.0000000002303837 11.445570908911176 KGESGQS(ph)WPR ddPTM_KYSE-520_SHP099_60min_R1 1 KGESGQSWPR 10 1 A0A087WYT3;Q15185-4;Q15185;B4DDC6;Q15185-3 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 1 KGES(0.036)GQS(0.964)WPR 53.754 0.041607 346390000.0 441910.0 414070.0 411120.0 443530.0 405180.0 320460.0 341640.0 407540.0 573880.0 362540.0 True False 417396.3713742556 394177.4556682584 437621.4530152572 485682.9578478431 437065.36084115756 318459.8902713985 376176.30528508796 406126.3388605506 469677.8583375249 359328.1776518518 1.161602115653355 1.0969845399938871 1.2178879370803553 1.351641724903675 1.2163403485284816 0.886264729786791 1.04688785539541 1.1302379387959964 1.3070999925660978 1.0 18.454942546889725 KGESGQSWPR ddPTM_KYSE-520_SHP099_60min_R1 1 KGESGQSWPR 10 1 A0A087WYT3;Q15185-4;Q15185;B4DDC6;Q15185-3 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 0 69.26100000000001 0.060770000000000005 1714900000.0 2237600.0 2121900.0 1652700.0 1338100.0 1980900.0 1934700.0 1597800.0 1986300.0 2065300.0 2083700.0 False True 2113475.8674549856 2019960.7389631683 1759235.6864134946 1465272.6216855638 2136785.560220761 1922624.8196594743 1759321.2170252712 1979409.9889059055 1690293.5819761797 2065240.039094068 1.023356039708622 0.9780755266827182 0.8518310961979972 0.7094926468345616 1.0346427145379562 0.9309449668150183 0.8518725105663794 0.9584406419769914 0.818448969601441 1.0 20.977878042535362 -4.60322114750147 5.041882858906517 0.8914859503791622 1.0132579572492375 0.1902063489013177 0.08950398327326592 0.29743728134478375 12.952279139883716 0.02299946277963328 0.06558964392242304 2.4933247753805908e-05 4.60322114750147 0.12177200687007528 KGFNGCDS(ph)PEPDGEDSLEQSPLLEDK ddPTM_KYSE-520_SHP099_60min_R1 3 KGFNGCDSPEPDGEDSLEQSPLLEDK 26 1 Q14814-4;Q14814;Q05BX2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 KGFNGCDS(1)PEPDGEDSLEQSPLLEDK;KGFNGCDS(1)PEPDGEDSLEQSPLLEDK;KGFNGCDS(1)PEPDGEDSLEQSPLLEDK 181.85 1.9012000000000002e-11 953400000.0 857981.0 759554.0 757303.0 720482.0 776728.0 838851.0 785184.0 822579.0 1027656.0 859255.0 True False 810387.0835872805 723063.8857262031 806119.9631076411 788956.3926591881 837852.074622219 833615.4197530209 864558.0613773748 819725.6654403822 841059.5754995943 851642.6691902736 0.9515576343277654 0.8490226146297708 0.9465471755590702 0.9263936874009772 0.9838070647855556 0.9788323787787749 1.0151652713683086 0.9625230100551003 0.9875733167517998 1.0 19.69988870826538 -5.585978441610965 1.5258826874257272 0.989066311442387 0.9052452595185201 0.5770809915695752 0.029104161011617266 0.2625305425000026 1.2503638099696872 0.009709352239884225 0.015625248651379434 2.594308140444033e-06 5.585978441610965 -0.08382105192386691 KGFNGCDS(ph)PEPDGEDSLEQSPLLEDKYR ddPTM_KYSE-520_SHP099_60min_R1 1 KGFNGCDSPEPDGEDSLEQSPLLEDKYR 28 2 Q14814-4;Q14814;Q05BX2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 KGFNGCDS(1)PEPDGEDSLEQSPLLEDKYR 83.633 0.004967 586820000.0 116710.0 106770.0 115830.0 110680.0 103570.0 111370.0 110420.0 93993.0 120630.0 115020.0 True False 110235.86364438302 101640.60893496261 123296.58713455273 121198.99392284473 111720.36976731008 110674.89851939597 121582.33119535001 93666.96022113114 98726.63283483587 114001.01228420578 0.9669726736247201 0.8915763719849387 1.0815394062218762 1.0631396291525403 0.9799945415290697 0.9708238225418756 1.0665022069474603 0.8216327060992966 0.8660154050975379 1.0 16.79868710944893 -7.262430230772037 24.999981085555852 0.882868042194232 1.0018738355224015 0.3344892713186072 0.06845220041563012 95.31300000483996 2404737.3123613563 0.035390923480786186 0.018569890488557995 5.464743337049648e-08 7.262430230772037 0.11900579332816952 KGGDGIKPPPIIGR ddPTM_KYSE-520_SHP099_60min_R1 2 KGGDGIKPPPIIGR 14 2 J3KQ32;Q9NTK5;Q9NTK5-3;C9JTK6 J3KQ32 OLA1 Obg-like ATPase 1 0 ; 128.85 2.9151999999999998e-05 1589750000.0 2193350.0 1918610.0 1630160.0 1280620.0 2101500.0 1917220.0 1390870.0 1823620.0 1775760.0 1665520.0 False True 2071680.503165175 1826437.095707677 1735242.721948219 1402329.7397675558 2266876.094100628 1905253.91882335 1531472.7131830892 1817294.2878561062 1453326.747266753 1650764.7885549513 1.2549822467310352 1.1064187389812852 1.051175027465432 0.8495030603331012 1.373227797089741 1.1541643800696608 0.9277352677989406 1.1008802104671325 0.8803960184654582 1.0 20.6547031398723 -6.754159689789679 24.94517689240145 0.9856595540480626 1.1249426652825483 0.23051516923190096 0.1374694849404666 287.50594265858405 985194.1116038453 0.05479628803502363 0.04155006085596801 1.7613282880987111e-07 6.754159689789679 0.13928311123448567 KGGEFDEFVNDDT(ph)DDDLPISK ddPTM_KYSE-520_SHP099_60min_R1 13 KGGEFDEFVNDDTDDDLPISK 21 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK;KGGEFDEFVNDDT(1)DDDLPISK 270.18 1.8317999999999995e-35 110619300000.0 17655770.0 16125320.0 14857163.0 15231710.0 16504894.0 15070889.0 15033155.0 14778040.0 18889200.0 14945970.0 True False 16676369.242195105 15350635.42260121 15814879.499281289 16679327.138819389 17803735.257799137 14976825.99148856 16552853.016854115 14726778.428460483 15459397.437982103 14813560.33358871 1.1257502495455198 1.0362556385445516 1.0675947674390036 1.1259499244756295 1.20185389986433 1.011021365169699 1.1174121982898115 0.9941417253398931 1.04359769628973 1.0 23.82041508797842 -7.261964973717755 24.998895268869532 1.0141522801587546 1.0961611440965282 0.3657286750894917 0.05148464410839991 56.54880967768989 2689480.202285808 0.02675122208403927 0.014042498122691949 5.4706008205496e-08 7.261964973717755 0.08200886393777362 KGGEFDEFVNDDT(ph)DDDLPISKK ddPTM_KYSE-520_SHP099_60min_R1 2 KGGEFDEFVNDDTDDDLPISKK 22 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 KGGEFDEFVNDDT(1)DDDLPISKK;KGGEFDEFVNDDT(1)DDDLPISKK 84.948 0.002704 1285480000.0 344120.0 377310.0 399200.0 236340.0 361260.0 324120.0 282452.0 296640.0 490920.0 346242.0 True False 325030.97761378734 359183.4612461437 424933.07074258296 258801.68254178774 389689.1067117739 322097.0468537904 311005.00462587463 295611.0250762967 401781.3030861121 343174.5652521996 0.9471301504379309 1.0466494245637905 1.238241739827947 0.7541400463393723 1.1355419257991648 0.9385807675375962 0.9062589017846253 0.8614013245971526 1.1707782095996604 1.0 18.388583104359604 -5.245907826623369 24.98890710681995 0.9642452521792553 1.0742712951038254 0.12730785722910865 0.1326020908502101 1733.282128382688 2788695.2473979364 0.03481363190612096 0.06003170285149169 5.6766507218067435e-06 5.245907826623369 0.11002604292457008 KGGHERPPS(ph)PGLR ddPTM_KYSE-520_SHP099_60min_R1 8 KGGHERPPSPGLR 13 2 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KGGHERPPS(1)PGLR;KGGHERPPS(1)PGLR;KGGHERPPS(1)PGLR;KGGHERPPS(1)PGLR;KGGHERPPS(1)PGLR;KGGHERPPS(1)PGLR;KGGHERPPS(1)PGLR;KGGHERPPS(1)PGLR 122.46 5.4246e-05 112970570000.0 3847660.0 3252460.0 3327800.0 3301850.0 3496380.0 3551420.0 3281000.0 3464880.0 4201070.0 2491424.0 True False 3634222.629679947 3096206.939558008 3542315.3126682607 3615656.831262597 3771525.2143190783 3529254.270447638 3612675.499474225 3452861.139989075 3438261.588356496 2469351.9216585415 1.4717313469191624 1.253854062841897 1.4345121412621749 1.4642128566405954 1.52733402689153 1.4292228821225337 1.4630055229421368 1.39828637210607 1.3923740711883568 1.0 21.235701027291743 -8.685438894900711 1.327916533525686 0.9996863900689051 1.4312108194110482 0.7851994909305938 0.06719121817235571 2.3095500888908997 4.013087757055435 0.06884586595182819 0.02012860504888351 2.063293951709653e-09 8.685438894900711 0.4315244293421431 KGGQLS(ph)PVCNGGIMTPPK ddPTM_KYSE-520_SHP099_60min_R1 1 KGGQLSPVCNGGIMTPPK 18 1 O96020;O96020-2 O96020 CCNE2 G1/S-specific cyclin-E2 1 KGGQLS(1)PVCNGGIMTPPK 152.07 1.6993e-06 700850000.0 374440.0 353050.0 265610.0 252920.0 256610.0 357320.0 258600.0 340030.0 415640.0 380810.0 True False 353669.0667723658 336088.9480611463 282731.64559102606 276957.44075682934 276803.7470888233 355089.8333388757 284741.8116927873 338850.51529359893 340170.253431743 377436.3196656973 0.937029767261448 0.8904520591945864 0.7490843643278606 0.7337858767861448 0.7333786725506273 0.9407940222959615 0.7544102060580409 0.8977687033238493 0.9012652882293851 1.0 18.525873730656674 -7.910348576532476 1.1620403011773235 0.9979882946155046 0.8163562908070723 0.33910892041436114 0.07761353115960144 0.5586124156549633 1.6814781060407225 0.07726393508639853 0.024800036647964308 1.2292817198927882e-08 7.910348576532476 -0.18163200380843236 KGHAVGDIPGVR ddPTM_KYSE-520_SHP099_60min_R1 2 KGHAVGDIPGVR 12 1 D6RD47;P62266 D6RD47 RPS23 40S ribosomal protein S23 0 ; 87.49799999999999 0.0062676 2081820000.0 4640300.0 4020500.0 3326700.0 2455400.0 3464800.0 3285000.0 2359000.0 2857700.0 3407300.0 3065900.0 False True 4382893.308791283 3827349.145106463 3541144.4049081965 2688760.4777570697 3737460.047984703 3264497.09649112 2597470.7416213662 2847787.3056921912 2788620.2110431576 3038738.511234109 1.4423397382130385 1.2595190836450352 1.1653337040409073 0.8848278546564035 1.2299380266408069 1.0742935216118101 0.8547858698662648 0.937161027565887 0.917690087756392 1.0 21.535041103092976 -1.000000000013254 0.39705202099870257 0.9384162176847569 9.267562546392666 0.6922302950825411 0.1015634706432675 41.30684303720646 0.5515069538787741 0.07669007407198103 268.44825901522904 0.09999999999694814 1.000000000013254 8.329146328707909 KGHEY(ph)TNIK ddPTM_KYSE-520_SHP099_60min_R1 1 KGHEYTNIK 9 1 Q06124;Q06124-1 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 1 KGHEY(0.987)T(0.013)NIK 82.749 0.015187 0.0 444710.0 446000.0 454900.0 473690.0 575120.0 491850.0 506110.0 594920.0 718100.0 525900.0 True False 420041.0497925939 424573.4905403517 484223.5818657348 518709.35517990816 620378.6720148241 488780.181707506 557272.537957604 592856.3613753718 587711.1418278669 521240.9351440085 0.8058481624750845 0.8145436436665331 0.928982259867893 0.995143167404147 1.1901956085690504 0.9377240902471825 1.0691265792538738 1.1373940943674683 1.1275229979116932 1.0 18.99159086342768 -5.098729694198037 1.7220446296573688 1.0768609750667653 0.8017006287435099 0.6957524556571006 0.06914049001570516 0.20989479553358606 1.1975547894596068 0.021360891226265052 0.055038258041248775 7.966550359188827e-06 5.098729694198037 -0.27516034632325537 KGHEYT(ph)NIK ddPTM_KYSE-520_SHP099_60min_R1 1 KGHEYTNIK 9 1 Q06124;Q06124-1 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 1 KGHEY(0.32)T(0.68)NIK 67.563 0.067725 0.0 630440.0 531190.0 512500.0 685570.0 726310.0 797250.0 778540.0 939790.0 1027700.0 839060.0 True False 595468.2364490178 505670.8350675552 545536.5700289926 750726.3666758641 783466.4648613966 792274.0670251276 857242.4210181847 936530.0878386348 841095.5862087444 831626.5811788023 0.7160283833219495 0.6080503515782096 0.6559874135525023 0.9027205042096359 0.9420892532690088 0.9526800669383441 1.0308020936549105 1.1261425608969058 1.0113861259900088 1.0 19.665576346055374 -5.505986018633902 1.3164564283842504 1.0335827711112426 0.6363791291845419 0.8932035991618641 0.05404914068709399 0.13547636385121456 0.47602587594738677 0.020736387676783687 0.03854892074189635 3.1189899930119314e-06 5.505986018633902 -0.39720364192670077 KGICEYHEK ddPTM_KYSE-520_SHP099_60min_R1 1 KGICEYHEK 9 1 Q9Y2Z0-2;Q9Y2Z0 Q9Y2Z0-2 SUGT1 Suppressor of G2 allele of SKP1 homolog 0 74.84100000000001 0.035121 451830000.0 1746100.0 1607400.0 1205900.0 1038200.0 1609500.0 1656200.0 1243500.0 1423000.0 1390000.0 1328400.0 False True 1649240.352235947 1530178.0912434114 1283634.2435082207 1136870.215853789 1736158.4931976963 1645863.0414638023 1369205.1153904912 1418063.9451306968 1137611.0390485101 1316631.4094795615 1.2526211514943726 1.1621916963444314 0.9749381901922087 0.8634688551924881 1.3186366971785715 1.2500560366506672 1.0399304661368447 1.0770394317808578 0.8640315207869645 1.0 20.328420089449697 -7.617330687650509 4.761228022319484 0.9338051965434426 1.1175993398010307 0.23910244402199132 0.13372010398086104 0.3387015139150518 12.87013667286265 0.10544439490942188 0.03698060724609188 2.4136223145580403e-08 7.617330687650509 0.18379414325758803 KGIS(ph)PMNRPPLSDK ddPTM_KYSE-520_SHP099_60min_R1 2 KGISPMNRPPLSDK 14 2 Q96QD9-4;Q96QD9;H9KVC1;H9KVC6;Q96QD9-3;Q96QD9-2 Q96QD9-4 FYTTD1 UAP56-interacting factor 1 KGIS(1)PMNRPPLSDK;KGIS(1)PMNRPPLSDK 104.03 0.0006451 1313090000.0 1423510.0 1211670.0 1212120.0 1155570.0 1302430.0 1341680.0 1197980.0 1351190.0 1524270.0 1386230.0 True False 1344545.062603169 1153459.554446252 1290255.1946605705 1265395.0253652104 1404923.8311869977 1333306.0774490733 1319083.509558101 1346503.037260117 1247500.9917197644 1373949.0806706203 0.9785989026222869 0.8395213262803393 0.9390851617519922 0.9209912093303887 1.022544322021933 0.9704188431774274 0.9600672456611422 0.9800239733796343 0.9079674125265712 1.0 20.389897107377408 -5.575301022598919 16.732261829081565 0.9716908276517215 0.914267477412072 0.27717047126004 0.042421415567480435 5.176999229357977 1651.3292659864962 0.012047947925065205 0.015553904197851845 2.6588814700394954e-06 5.575301022598919 -0.05742335023964951 KGIVDQSQQAYQEAFEISK ddPTM_KYSE-520_SHP099_60min_R1 2 KGIVDQSQQAYQEAFEISK 19 1 P63104;B0AZS6;B7Z2E6;H0YB80;P63104-2 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ; 175.59 1.0952e-08 1143500000.0 686990.0 668530.0 402470.0 695070.0 569250.0 618080.0 564250.0 638130.0 526470.0 478750.0 False True 648881.2952193883 636412.8153160117 428413.86017476796 761129.2438195837 614046.7364105552 614222.3334548656 621289.8965493235 635916.4759706614 430876.3192286834 474508.6474618642 1.3674804425382747 1.3412038299410751 0.9028578561557177 1.6040366132226387 1.2940685900985724 1.2944386508872423 1.309333138337075 1.340157822986291 0.9080473486277455 1.0 18.85607485364667 -7.760507363034608 24.99999915698332 0.9540235445354515 1.303555671838141 0.4314626583126734 0.16190281794781486 22.200500025702983 595639.5161698681 0.12232202966000402 0.04011478165419623 1.735771834322477e-08 7.760507363034608 0.34953212730268945 KGLNVIGASDQS(ph)PLQS(ph)PSNLR ddPTM_KYSE-520_SHP099_60min_R1 1 KGLNVIGASDQSPLQSPSNLR 21 1 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;A0JP02;Q9HAU0-5;H0YGJ6 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 2 KGLNVIGAS(0.009)DQS(0.991)PLQS(0.98)PS(0.02)NLR 87.48899999999999 0.0017114 355460000.0 157450.0 121830.0 134660.0 125020.0 138980.0 115200.0 105780.0 136350.0 197450.0 140680.0 True False 148715.9346312064 115977.10392944173 143340.39906361792 136901.8632113663 149916.93531197013 114480.99406872962 116473.27471331412 135877.03367432934 161598.05730944517 139433.6846473837 1.0665710728888556 0.8317724961707659 1.028018440638028 0.9818421105171238 1.0751844914024735 0.8210425935328514 0.8353309676056072 0.9744921682156731 1.1589599580482532 1.0 17.08921960668493 -7.595294444980947 7.955442139621546 1.0773856800197619 0.9453066728060843 0.22260472614615645 0.09635052656102647 0.37645954549692373 35.907523572956165 0.06601843123255301 0.024679674631297045 2.5392505489891572e-08 7.595294444980947 -0.1320790072136776 KGLPLGSAVSS(ph)PVLFS(ph)PVGR ddPTM_KYSE-520_SHP099_60min_R1 4 KGLPLGSAVSSPVLFSPVGR 20 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 2 KGLPLGSAVS(0.143)S(0.86)PVLFS(0.997)PVGR;KGLPLGS(0.001)AVS(0.279)S(0.729)PVLFS(0.991)PVGR;KGLPLGSAVS(0.149)S(0.851)PVLFS(1)PVGR;KGLPLGSAVS(0.263)S(0.737)PVLFS(1)PVGR 164.35 5.374e-09 1839325000.0 3492540.0 3843180.0 3642960.0 2775690.0 3179050.0 2861270.0 2624490.0 2591880.0 4202540.0 2917230.0 True False 3298801.843994116 3658547.864069209 3877791.0305420877 3039490.743058368 3429223.1486797957 2843411.7525957855 2889799.061754068 2582889.3732293383 3439464.673412177 2891385.6117706 1.140906916934551 1.2653268554618078 1.3411531878542626 1.0512228914347654 1.1860137695642192 0.9834080037683259 0.9994512838377304 0.8933050516384261 1.1895558514956948 1.0 21.46332959705663 -5.816139636423172 1.3610929685834223 1.007567022607257 1.240592460742211 0.4632091497350983 0.09860530649530255 0.35179291528587703 1.3641155655576174 0.0381536285209264 0.05088624627865594 1.5270749868985608e-06 5.816139636423172 0.2330254381349539 KGLPLGSAVSSPVLFS(ph)PVGR ddPTM_KYSE-520_SHP099_60min_R1 2 KGLPLGSAVSSPVLFSPVGR 20 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 KGLPLGSAVSSPVLFS(1)PVGR;KGLPLGSAVSSPVLFS(1)PVGR 171.08 3.2883000000000003e-09 2230400000.0 2019610.0 2158830.0 2113270.0 1677470.0 1673950.0 1863780.0 1384580.0 1423720.0 2276960.0 1622200.0 True False 1907578.2073072798 2055116.5663301079 2249494.765551554 1836896.244450255 1805680.341527359 1852147.4576859134 1524546.858598605 1418781.4476187474 1863521.4614905743 1607828.5700525043 1.1864313415235475 1.2781938352190105 1.3990886885895404 1.1424702102353304 1.1230552654431274 1.151955806846641 0.9482023687070198 0.8824208463794224 1.1590299464760228 1.0 20.616682160965652 -6.03044934451072 1.1401903975378147 0.9963911568991832 1.2802004999964718 0.5828244747911195 0.09365289607797844 0.3332968702650758 0.9134280322683448 0.04513365950912094 0.05065251641957195 9.322892048840373e-07 6.03044934451072 0.28380934309728856 KGLVGPELHDR ddPTM_KYSE-520_SHP099_60min_R1 2 KGLVGPELHDR 11 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 132.79 0.00026107 3380800000.0 6219700.0 5885300.0 3935500.0 3475600.0 5870400.0 5931500.0 3928100.0 4967300.0 5335500.0 4847000.0 False True 5874680.842335435 5602561.353984605 4189188.6270226403 3805919.9790227576 6332367.081993018 5894479.3083217945 4325190.682561623 4950069.595676537 4366707.697009594 4804059.350908942 1.2228576737345946 1.166214017094644 0.8720101732777373 0.7922300082122563 1.3181284033876302 1.2269788688615062 0.9003199932871946 1.0303930976081654 0.908962062715441 1.0 22.19582254400075 -4.580222685729946 9.583785919349031 1.0148776912311503 1.2088161529012909 0.19889799772711725 0.15229481995071945 0.5444039419900748 86.11066695276715 0.04170556682984628 0.1108148913771066 2.628919660216793e-05 4.580222685729946 0.1939384616701405 KGNAEGS(ph)S(ph)DEEGKLVIDEPAK ddPTM_KYSE-520_SHP099_60min_R1 35 KGNAEGSSDEEGKLVIDEPAK 21 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 2 KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK;KGNAEGS(1)S(1)DEEGKLVIDEPAK 206.88 9.811799999999999e-15 385350419900.0 72939847.0 60120072.0 55672277.0 62360680.0 63082284.0 63490883.0 65607359.0 70190311.0 71535540.0 64224122.0 True False 68893728.2849299 57231813.49905217 59261001.05421266 68287420.27777791 68046500.86170189 63094612.84844982 72239591.11384016 69946837.19368276 58546489.200213194 63655146.24469088 1.082296284735595 0.8990916976147164 0.9309695217164832 1.0727713988006646 1.0689866393540377 0.9911942171323216 1.1348586151408813 1.0988402559756374 0.9197447913348598 1.0 25.92377381873988 -5.264728573022118 24.84448225350961 1.0480444792801822 0.96361642007281 0.1575850882241039 0.0724445353930082 401.449839259928 3032299.840028306 0.019960357887293702 0.03104182855814229 5.435899602219139e-06 5.264728573022118 -0.08442805920737217 KGNAEGS(ph)S(ph)DEEGKLVIDEPAKEK ddPTM_KYSE-520_SHP099_60min_R1 11 KGNAEGSSDEEGKLVIDEPAKEK 23 3 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 2 KGNAEGS(1)S(1)DEEGKLVIDEPAKEK;KGNAEGS(1)S(1)DEEGKLVIDEPAKEK;KGNAEGS(1)S(1)DEEGKLVIDEPAKEK;KGNAEGS(1)S(1)DEEGKLVIDEPAKEK;KGNAEGS(1)S(1)DEEGKLVIDEPAKEK;KGNAEGS(1)S(1)DEEGKLVIDEPAKEK;KGNAEGS(1)S(1)DEEGKLVIDEPAKEK;KGNAEGS(1)S(1)DEEGKLVIDEPAKEK;KGNAEGS(1)S(1)DEEGKLVIDEPAKEK;KGNAEGS(1)S(1)DEEGKLVIDEPAKEK;KGNAEGS(1)S(1)DEEGKLVIDEPAKEK 116.35 0.00029857 66206540000.0 14026690.0 14408520.0 13813800.0 12264880.0 12511310.0 12244140.0 10529420.0 11350810.0 16873000.0 10926940.0 True False 13248601.544186704 13716313.071570566 14704259.65086146 13430530.507629365 13495878.91738383 12167719.780526886 11593836.530836284 11311436.689408962 13809288.533716211 10830135.812630676 1.2233089015130805 1.2664950199030633 1.3577170134572623 1.240107302437147 1.2461412442902353 1.123505742775289 1.0705162641926373 1.0444408902256763 1.2750799041329741 1.0 23.368547999030373 -6.2259080076547235 2.5895103971644486 1.0996377818316374 1.27612338819561 0.5518858562187275 0.0744521329865257 0.22222734901862423 2.9462672955971976 0.027333358355811462 0.025922846290066432 5.944180550344261e-07 6.2259080076547235 0.1764856063639726 KGNAEGS(ph)SDEEGKLVIDEPAK ddPTM_KYSE-520_SHP099_60min_R1 12 KGNAEGSSDEEGKLVIDEPAK 21 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 KGNAEGS(0.5)S(0.5)DEEGKLVIDEPAK;KGNAEGS(0.566)S(0.434)DEEGKLVIDEPAK;KGNAEGS(0.5)S(0.5)DEEGKLVIDEPAK;KGNAEGS(0.5)S(0.5)DEEGKLVIDEPAK;KGNAEGS(0.897)S(0.103)DEEGKLVIDEPAK;KGNAEGS(0.5)S(0.5)DEEGKLVIDEPAK;KGNAEGS(0.805)S(0.195)DEEGKLVIDEPAK;KGNAEGS(0.628)S(0.372)DEEGKLVIDEPAK;KGNAEGS(0.605)S(0.395)DEEGKLVIDEPAK;KGNAEGS(0.951)S(0.049)DEEGKLVIDEPAK;KGNAEGS(0.922)S(0.078)DEEGKLVIDEPAK;KGNAEGS(0.634)S(0.366)DEEGKLVIDEPAK 216.74 3.1714000000000005e-19 20145150000.0 9883970.0 8163070.0 7692110.0 8345170.0 8637860.0 8554020.0 9348970.0 9174670.0 9797040.0 8480630.0 True False 9335686.480894286 7770903.864182128 8187955.718411156 9138292.447733149 9317610.439299569 8500631.188227398 10294055.124754507 9142845.211154073 8018144.499280445 8405498.216030307 1.1106642629570722 0.9245024702238434 0.9741190239973794 1.0871803446826405 1.108513760853551 1.0113179456769927 1.2246811384865317 1.0877219857970533 0.9539166261422635 1.0 23.002901903657 -5.266261908443698 24.5705699181719 1.0771762620875076 0.9952359731961887 0.10539536144062278 0.08198188723084486 568.0965722148509 2894425.506462584 0.02279697473697376 0.03513736569441473 5.416741263735935e-06 5.266261908443698 -0.08194028889131888 KGNAEGS(ph)SDEEGKLVIDEPAKEK ddPTM_KYSE-520_SHP099_60min_R1 2 KGNAEGSSDEEGKLVIDEPAKEK 23 3 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 KGNAEGS(0.5)S(0.5)DEEGKLVIDEPAKEK;KGNAEGS(0.795)S(0.205)DEEGKLVIDEPAKEK 112.8 0.00029915 9241000000.0 1481590.0 1539920.0 1455540.0 1174130.0 1289780.0 1283690.0 1146130.0 1174440.0 1705500.0 1066350.0 True False 1399403.2492235585 1465939.9317329556 1549366.4373463427 1285718.9621849437 1391278.3481556552 1275678.0145493716 1261992.0055508665 1170366.1417563567 1395824.1921562834 1056902.9686077456 1.324060288208848 1.3870146789955873 1.465949555792541 1.2164966892643103 1.316372826531447 1.2069963397205872 1.1940471765476106 1.1073543896825986 1.3206739252468913 1.0 20.011411502209274 -1.4985317126186963 0.04534983917098734 0.38092888456378665 2.7149584394143584 0.6123098903552052 0.08096592727796238 347.4851593316226 1.3044440806337616 17.872486885555443 61.06156471706452 0.031729869606860514 1.4985317126186963 2.334029554850572 KGNAEGSS(ph)DEEGKLVIDEPAK ddPTM_KYSE-520_SHP099_60min_R1 2 KGNAEGSSDEEGKLVIDEPAK 21 2 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 KGNAEGS(0.172)S(0.828)DEEGKLVIDEPAK;KGNAEGS(0.342)S(0.658)DEEGKLVIDEPAK 237.33 1.5727e-26 3534310000.0 3439800.0 2734540.0 2642400.0 2957600.0 3074600.0 2986070.0 3102500.0 3412900.0 3251100.0 2922000.0 True False 3248987.4369287062 2603168.593771782 2812733.3319894834 3238689.414765138 3316553.5279190056 2967432.829503575 3416130.977482101 3401061.4464768507 2660782.193561592 2896113.353281599 1.1218440166533068 0.8988490007900138 0.9712096830748571 1.1182882089526518 1.14517393601359 1.0246259270691749 1.1795570686524641 1.1743537049829533 0.9187424209576078 1.0 21.46568663963785 -5.258045327625927 24.88826498017672 1.0919139356218808 0.98745570529677 0.13095330475959377 0.09335383638042992 444.79523421348114 3261632.300500663 0.024953535329674856 0.041078873206139455 5.520198215701172e-06 5.258045327625927 -0.10445823032511081 KGNAEGSS(ph)DEEGKLVIDEPAKEK ddPTM_KYSE-520_SHP099_60min_R1 1 KGNAEGSSDEEGKLVIDEPAKEK 23 3 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 KGNAEGS(0.319)S(0.681)DEEGKLVIDEPAKEK 167.03 2.5455e-10 1212500000.0 287880.0 301880.0 308020.0 220910.0 194820.0 190040.0 252540.0 232290.0 304400.0 195050.0 True False 271910.7225254479 287377.2316688821 327875.4620494248 241905.2199809866 210151.22562583137 188853.88986824127 278069.2077528866 231484.2402068934 249128.6332995446 193322.0087466037 1.4065171590569088 1.4865210305442305 1.6960069066900019 1.2513071923335082 1.0870527726684576 0.976887686470199 1.43837325897728 1.197402415315841 1.28867186366809 1.0 17.56064636497155 -5.419823297593066 5.944966148942937 1.1780481476341635 1.5231472467729992 0.5633244383399635 0.1435572997001325 0.18092386740722172 8.729908231316136 0.04170255649906056 0.062070821280370087 3.8034411633887477e-06 5.419823297593066 0.34509909913883563 KGNLEWLDK ddPTM_KYSE-520_SHP099_60min_R1 1 KGNLEWLDK 9 1 K7ENE3;Q9BRG1 K7ENE3 VPS25 Vacuolar protein-sorting-associated protein 25 0 96.113 0.055510000000000004 0.0 524150.0 578480.0 330520.0 339990.0 544670.0 571940.0 411330.0 485230.0 488200.0 532980.0 False True 495074.3546328799 550688.9524838174 351825.84805069835 372302.5473782791 587532.4302516244 568370.3103096285 452911.2505939444 483546.8503835337 399555.1865204915 528258.2118521649 0.9371825056861176 1.0424616979507169 0.6660111289460809 0.7047738000568354 1.1122069038768632 1.0759327494726936 0.8573671746738379 0.9153607829173815 0.7563634176543734 1.0 19.01088376367949 -5.752743485210872 24.99956208366217 0.9500176978964538 0.8399829272260877 0.1428247502384299 0.13818051704318648 455.84749128872204 1310495.8514330802 0.04467244290184939 0.05677192128199237 1.767081233969876e-06 5.752743485210872 -0.11003477067036616 KGNS(ph)PNSEPPTPK ddPTM_KYSE-520_SHP099_60min_R1 9 KGNSPNSEPPTPK 13 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 KGNS(1)PNSEPPTPK;KGNS(1)PNSEPPTPK;KGNS(0.954)PNS(0.046)EPPTPK;KGNS(0.984)PNS(0.016)EPPTPK;KGNS(0.928)PNS(0.072)EPPTPK;KGNS(0.995)PNS(0.005)EPPTPK;KGNS(1)PNSEPPTPK;KGNS(0.976)PNS(0.024)EPPTPK;KGNS(0.994)PNS(0.006)EPPTPK 225.85 1.1822e-11 12727270000.0 10549410.0 9672820.0 8763800.0 7507000.0 8040240.0 8977730.0 8204190.0 9570210.0 10824790.0 9327030.0 True False 9964213.197572548 9208123.20800118 9328728.570575774 8220463.022938157 8672961.145292236 8921696.656950157 9033549.59037838 9537013.175213808 8859281.0067496 9244399.770519538 1.0778648094978 0.9960758336486005 1.0091221498582483 0.889237076175922 0.9381854269165615 0.9650920425792832 0.9771915770222788 1.031653045298562 0.9583403170211132 1.0 23.140148219272 -4.227668478017476 1.6344910386678524 0.9676259310501678 1.1219679594636078 0.4326569589049305 0.03709559649343597 1.1204325934977173 2.7114975030288226 0.011061426354219446 0.28106831063940907 5.920133796296982e-05 4.227668478017476 0.15434202841344002 KGNSPNS(ph)EPPTPK ddPTM_KYSE-520_SHP099_60min_R1 2 KGNSPNSEPPTPK 13 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 KGNS(0.359)PNS(0.641)EPPTPK;KGNS(0.001)PNS(0.998)EPPTPK 164.88 5.0209e-06 0.0 1228820.0 940640.0 932640.0 817290.0 955870.0 962980.0 988760.0 1100440.0 1322860.0 1026460.0 True False 1160654.9050080604 895450.2424705755 992759.4666767607 894964.9958728022 1031091.5308436666 956969.6846207066 1088713.510167672 1096622.830484626 1082661.9705868438 1017366.3629737953 1.1408426180077627 0.8801649779860473 0.9758131414674377 0.8796880145091392 1.0134908803449647 0.9406342881471458 1.0701292570606784 1.077903565908314 1.0641810167796262 1.0 19.95640786982359 -6.766760112223033 24.98915629134307 1.0595454420071113 0.9655026691560685 0.2276087573348522 0.07241172388928663 170.14052073540876 799065.5529342762 0.02822587026841626 0.019662544423680456 1.710960123516777e-07 6.766760112223033 -0.09404277285104279 KGNYSER ddPTM_KYSE-520_SHP099_60min_R1 2 KGNYSER 7 1 A0A0U1RRH7;A0A0U1RR32;A0A3B3IS11;P20671;P04908;Q7L7L0 A0A0U1RRH7 HIST1H2AD;HIST1H2AB;HIST3H2A Histone H2A type 1-D;Histone H2A type 1-B/E;Histone H2A type 3 0 ; 80.165 0.036542000000000005 3427200000.0 1158870.0 2688300.0 935940.0 700350.0 1992130.0 3091100.0 1916350.0 1159920.0 916260.0 11224200.0 False True 1094585.17094993 2559150.0327794356 996272.1899569485 766911.0534320954 2148899.2973308004 3071807.298314674 2110073.359773674 1155896.5082473638 749890.2810349554 11124762.32029547 0.09839178037566004 0.23004087270346874 0.08955446968421055 0.06893729783628551 0.19316361423834236 0.2761234091905604 0.18967356776010935 0.10390302956303192 0.06740730807946273 1.0 23.407271177549536 -10.206692709541096 4.82741287032562 1.0001228875202919 0.15008771497908874 0.9323319048591625 0.06898643706524477 403472248.6636738 129.95836269171997 564280.572087919 0.01785719027954856 6.213084932865918e-11 10.206692709541096 -0.8500351725412032 KGPAAPPPT(ph)PVKPPR ddPTM_KYSE-520_SHP099_60min_R1 2 KGPAAPPPTPVKPPR 15 2 E9PIE3;Q969G5 E9PIE3 PRKCDBP Protein kinase C delta-binding protein 1 KGPAAPPPT(1)PVKPPR;KGPAAPPPT(1)PVKPPR 92.492 0.0047334 4825600000.0 1942890.0 2101000.0 1659680.0 1267760.0 1307060.0 2084150.0 1372860.0 1613790.0 1916020.0 1962750.0 True False 1835114.0186448083 2000064.8063347086 1766665.6283818907 1388247.5292340561 1409918.1858459034 2071142.046773811 1511642.0866224263 1608192.1391514177 1568119.066933619 1945361.5619963915 0.9433279933636379 1.0281198340745352 0.9081425596632446 0.7136192861800933 0.7247589411600179 1.0646566104906172 0.7770494267765481 0.8266803305710636 0.8060810378736823 1.0 20.89160688660354 -4.9991927633534345 13.746333334685318 0.8366702731973406 0.9813522389440137 0.21503994235518298 0.10702488834907396 0.17378096561229442 2363.9521021640617 0.02813963798259909 0.05626176239815118 1.0018604595802735e-05 4.9991927633534345 0.14468196574667314 KGPAS(ph)PTRPAAPR ddPTM_KYSE-520_SHP099_60min_R1 6 KGPASPTRPAAPR 13 2 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 KGPAS(0.974)PT(0.026)RPAAPR;KGPAS(0.956)PT(0.044)RPAAPR;KGPAS(0.976)PT(0.024)RPAAPR;KGPAS(0.993)PT(0.007)RPAAPR;KGPAS(0.813)PT(0.187)RPAAPR;KGPAS(0.963)PT(0.037)RPAAPR 132.15 2.0785e-05 58163000000.0 15347740.0 11906840.0 10786950.0 11276390.0 12155550.0 12626210.0 12858650.0 14464730.0 13846300.0 11621180.0 True False 14496370.267238826 11334817.533868792 11482294.056730222 12348094.715229724 13112122.629381321 12547405.139935205 14158527.83033046 14414555.227723375 11332160.956818275 11518225.386341222 1.2585593510289534 0.9840767265511298 0.9968804804207418 1.072048366918796 1.1383804526806889 1.0893522846682986 1.2292282322518375 1.2514562568654664 0.9838460853749581 1.0 23.45741512200374 -5.7302336168973005 6.44528678333951 1.1323996490632084 1.0649035080640825 0.008514994010744292 0.10664571335118352 0.5012096334595404 62.91231488521516 0.03175414673184432 0.04021969563472068 1.8610857469233627e-06 5.7302336168973005 -0.06749614099912593 KGPAS(ph)PTRPAAPRPAEAPLLDL ddPTM_KYSE-520_SHP099_60min_R1 5 KGPASPTRPAAPRPAEAPLLDL 22 3 A0A0D9SFE4 A0A0D9SFE4 DNM1 1 KGPAS(0.979)PT(0.021)RPAAPRPAEAPLLDL;KGPAS(0.922)PT(0.078)RPAAPRPAEAPLLDL;KGPAS(0.984)PT(0.016)RPAAPRPAEAPLLDL;KGPAS(0.978)PT(0.022)RPAAPRPAEAPLLDL;KGPAS(0.973)PT(0.027)RPAAPRPAEAPLLDL 134.69 1.8994e-06 22766140000.0 4401670.0 4425470.0 3865430.0 2812290.0 3275440.0 4055540.0 3044700.0 3663480.0 5211980.0 3861280.0 True False 4157500.5905883983 4212863.778434108 4114601.802706677 3079569.196054183 3533198.493295724 4030227.870533816 3352487.989408461 3650772.2429426615 4265615.815323782 3827072.0632303846 1.0863397714750902 1.1008059709432494 1.0751304743484742 0.8046802216352196 0.9232119058436006 1.0530838729835545 0.875992908944251 0.9539334986708061 1.1145898861708992 1.0 21.8678096363317 -5.03385960698751 24.914542100223628 0.9562503590603796 1.092171777629952 0.33510206293889067 0.08184277611859687 627.853351711137 461986.0777380102 0.022445820195979533 0.03890785144443946 9.249971465326137e-06 5.03385960698751 0.1359214185695724 KGPEADSEWR ddPTM_KYSE-520_SHP099_60min_R1 5 KGPEADSEWR 10 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;;;; 133.05 0.00076735 6281900000.0 11268020.0 10668270.0 7175550.0 6173780.0 10524170.0 10390150.0 8018640.0 9109270.0 8851400.0 8912430.0 False True 10642960.46835903 10155750.295800276 7638097.43428594 6760534.194985364 11352362.304663805 10325301.219819548 8829242.385584889 9077672.068489593 7244208.885635967 8833472.803965619 1.2048444258051123 1.1496894280628844 0.8646766230895013 0.7653314098561951 1.285152799651727 1.168883569232726 0.999521092273151 1.0276447632707202 0.8200861706829299 1.0 23.07454930188332 -4.583482476352745 9.10327408564024 1.0015274871799298 1.1912029213779098 0.2046441719878066 0.14723180746097425 0.4734308836651246 65.82964630750837 0.04020150958703014 0.1069490280419773 2.609261003759975e-05 4.583482476352745 0.18967543419798005 KGPGQPS(ph)SPQR ddPTM_KYSE-520_SHP099_60min_R1 5 KGPGQPSSPQR 11 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.5)S(0.5)PQR;KGPGQPS(0.86)S(0.14)PQR;KGPGQPS(0.873)S(0.127)PQR;KGPGQPS(0.5)S(0.5)PQR;KGPGQPS(0.5)S(0.5)PQR 133.15 0.00013412 194202000000.0 16298010.0 12442480.0 12769730.0 13339650.0 12786340.0 13102160.0 14152570.0 14090260.0 14429190.0 13778160.0 True False 15393926.896022556 11844724.584256757 13592887.228090394 14607446.325287994 13792552.213677198 13020384.559440523 15583249.891372724 14041384.176751407 11809212.82627942 13656096.221646266 1.1272567684183168 0.8673580203310002 0.9953713716914443 1.0696648652880567 1.009992313309468 0.9534485074000814 1.1411203932989085 1.0282136233409385 0.864757587718271 1.0 23.703041793038597 -3.975888079372459 14.634385492714582 0.9994750599416422 1.415151384185899 0.20022037150514638 0.07979084985402786 1469589.6554274939 24579734.627679043 0.01996382350976016 13864817.735200997 0.00010570898933350389 3.975888079372459 0.4156763242442567 KGPGQPS(ph)SPQRLDR ddPTM_KYSE-520_SHP099_60min_R1 2 KGPGQPSSPQRLDR 14 2 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.635)S(0.365)PQRLDR;KGPGQPS(0.878)S(0.122)PQRLDR 123.02 0.00036011 10724200000.0 13884700.0 13656600.0 13834100.0 10223900.0 11148600.0 11104700.0 9921400.0 9366000.0 15195100.0 10513200.0 True False 13114488.012536777 13000516.437025476 14725868.221342603 11195576.382072391 12025931.39314312 11035391.448220685 10924351.935532926 9333511.53204083 12436052.87729931 10420061.227145838 1.2585807056844878 1.2476429987913278 1.4132228112997538 1.0744252013516216 1.1541133138271535 1.0590524573379492 1.0483961367782884 0.89572521010967 1.1934721501349252 1.0 23.312860418971926 -5.331013378924256 7.872309031133836 1.0590346213743242 1.3002250927212264 0.628651736732052 0.08651636131136964 0.19564648731432344 20.153183910826776 0.024374541971615656 0.03626883053082957 4.666450045747933e-06 5.331013378924256 0.2411904713469022 KGPGQPSS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 5 KGPGQPSSPQR 11 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.162)S(0.838)PQR;KGPGQPS(0.191)S(0.809)PQR;KGPGQPS(0.019)S(0.981)PQR;KGPGQPS(0.069)S(0.931)PQR;KGPGQPS(0.115)S(0.885)PQR 168.61 6.274500000000001e-06 180929500000.0 16039680.0 13957500.0 13390780.0 13421190.0 13433620.0 13552790.0 14256640.0 14930900.0 14757460.0 13496320.0 True False 15149926.976090653 13286960.749365367 14253971.104805551 14696735.862372074 14490769.467157785 13468202.010457817 15697840.302598037 14879108.192798266 12077877.26929268 13376753.104778063 1.1325563727926793 0.9932874327043816 1.0655777970301443 1.0986773656697397 1.0832800271974674 1.0068364052893441 1.1735164863729826 1.1123108931033179 0.9029005151465765 1.0 23.673224642067677 -7.756873137966854 24.99985484051319 0.9514502416685454 1.0806434677771894 0.4748913493385857 0.05538506732743875 91.25855396598081 499655.8602726609 0.04014007720143538 0.01402346262239227 1.7503579121002267e-08 7.756873137966854 0.12919322610864403 KGPGQPSS(ph)PQRLDR ddPTM_KYSE-520_SHP099_60min_R1 7 KGPGQPSSPQRLDR 14 2 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 1 KGPGQPS(0.111)S(0.889)PQRLDR;KGPGQPS(0.005)S(0.995)PQRLDR;KGPGQPS(0.017)S(0.983)PQRLDR;KGPGQPS(0.453)S(0.547)PQRLDR;KGPGQPS(0.044)S(0.956)PQRLDR;KGPGQPS(0.171)S(0.829)PQRLDR;KGPGQPS(0.264)S(0.736)PQRLDR 131.18 1.7334e-05 95835730000.0 16037450.0 15735910.0 15548900.0 12333600.0 13936270.0 12801880.0 11376390.0 11138050.0 17750970.0 12596490.0 True False 15147820.678636042 14979933.263517529 16551206.97311961 13505781.635767939 15032975.16247048 12721978.71830372 12526426.524066923 11099414.704190426 14527841.313538814 12484894.898520913 1.213291805959104 1.1998445629920524 1.3256985427310592 1.081769750209749 1.2040930488130452 1.0189896528332725 1.003326549873554 0.8890274843647562 1.163633449189863 1.0 23.57368034050202 -6.09834929660905 1.3911066160077246 1.0006178691515075 1.2266332383837353 0.5549082175093281 0.08396182716001403 0.2968681407443805 1.1708587072541519 0.03525902156103266 0.03645332191910933 7.973531300113086e-07 6.09834929660905 0.22601536923222776 KGPGQPSSPQR ddPTM_KYSE-520_SHP099_60min_R1 1 KGPGQPSSPQR 11 1 O95400 O95400 CD2BP2 CD2 antigen cytoplasmic tail-binding protein 2 0 89.35600000000001 0.0075466000000000005 483900000.0 187580.0 142540.0 142090.0 153680.0 171790.0 166610.0 169890.0 170980.0 194760.0 186670.0 False True 177174.5634685404 135692.164443098 151249.34875203815 168285.7009944231 185308.8956486065 165570.1251891587 187064.13916661873 170386.91028703202 159396.49350006352 185016.24902706261 0.957616233170011 0.7334067421464701 0.8174922448563675 0.9095725477052974 1.0015817347021292 0.8948950487313171 1.0110687042371969 0.9209294382684694 0.8615269974300924 1.0 17.497292455239588 -5.386634428249821 4.132890149290858 0.945521016799431 0.8264256263540524 0.34475576725325474 0.06840065893022812 0.24076039300218005 6.900645912158458 0.019134320002522447 0.029111867162656044 4.105495417858214e-06 5.386634428249821 -0.11909539044537865 KGPIS(ph)MT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 KGPISMTK 8 1 Q92754-2;Q92754 Q92754-2 TFAP2C Transcription factor AP-2 gamma 2 KGPIS(1)MT(1)K 41.652 0.037522 185010000.0 376800.0 367480.0 361100.0 279790.0 363770.0 334150.0 315730.0 330440.0 454140.0 330630.0 True False 355898.1528678226 349825.70920127456 384377.08378042775 306381.15747806936 392396.62943182705 332064.44590335066 347647.0696278561 329293.78076527553 371679.62393776287 327700.87542624737 1.0860457800269787 1.0675153331410816 1.1729510434796993 0.9349415288547918 1.1974231955329036 1.0133157119932241 1.0608670763410817 1.0048608516439153 1.1342039396578096 1.0 18.322020001365146 KGPPTQELDRDS(ph)EEEEEEDDEDGEDEEEVPK ddPTM_KYSE-520_SHP099_60min_R1 2 KGPPTQELDRDSEEEEEEDDEDGEDEEEVPK 31 2 H0Y613;Q14687-2;Q14687-3;Q14687;H7C3B5 H0Y613 GSE1 Genetic suppressor element 1 1 KGPPTQELDRDS(1)EEEEEEDDEDGEDEEEVPK;KGPPT(0.016)QELDRDS(0.984)EEEEEEDDEDGEDEEEVPK 242.83 2.591e-31 1345960000.0 655000.0 604560.0 711790.0 593920.0 597160.0 557955.0 560898.0 535010.0 694090.0 533373.0 True False 618665.844289872 575516.0301369402 757673.122304268 650365.9782314408 644153.0946243785 554472.5958821019 617599.0436769554 533154.1751822726 568060.7525850224 528647.7301779153 1.1702799595520088 1.0886569586579922 1.4332287439298654 1.230244529778954 1.218492122169124 1.0488508022071623 1.168261979426458 1.0085244762194299 1.0745544152697728 1.0 19.01194716234155 -6.225464012948828 5.7260841921875265 1.0671439963673757 1.2329933023888415 0.4569925696916807 0.09143029563751369 0.1981417993498862 18.79623208958367 0.03175977790454267 0.031150303528584448 5.950260605079793e-07 6.225464012948828 0.16584930602146586 KGPQASS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 KGPQASSPR 9 1 Q8N1G1 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 KGPQAS(0.084)S(0.916)PR;KGPQAS(0.013)S(0.987)PR;KGPQAS(0.015)S(0.985)PR;KGPQAS(0.007)S(0.993)PR;KGPQAS(0.018)S(0.982)PR;KGPQAS(0.103)S(0.897)PR 91.961 0.004051099999999999 1820070000.0 4084050.0 3186830.0 2635289.0 3441650.0 3672080.0 4003940.0 3733440.0 3200640.0 4062330.0 5362550.0 True False 3857499.6051481655 3033729.903270649 2805163.9455514853 3768743.3812302 3961051.804722831 3978949.9252738706 4110852.5500631016 3189537.726874988 3324713.275005708 5315041.979000768 0.7257702987838637 0.5707819270772707 0.5277783236020384 0.7090712352075772 0.7452531551721652 0.7486206018681185 0.7734374566192881 0.6000964318770299 0.6255290716689235 1.0 22.341649655747922 -5.415955057202024 6.757668715951523 0.7297894586912913 0.6049146506154516 0.23041117034775027 0.11178335198943594 0.39711881468436966 21.859797891787807 0.031037217989377856 0.04613353413520159 3.837469553441311e-06 5.415955057202024 -0.12487480807583973 KGPS(ph)TPYTK ddPTM_KYSE-520_SHP099_60min_R1 3 KGPSTPYTK 9 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 KGPS(0.815)T(0.184)PYTK;KGPS(0.784)T(0.216)PYTK;KGPS(0.865)T(0.135)PY(0.001)TK 145.09 0.00036772 4275100000.0 11944400.0 11695800.0 9971200.0 8812100.0 9641100.0 10354400.0 9200200.0 9335400.0 11411500.0 10812900.0 True False 11281820.32142892 11133916.212246295 10613959.506484091 9649599.334545517 10399799.719644794 10289774.34883034 10130246.001299225 9303017.676298741 9339459.260505093 10717106.118308896 1.0526927882290236 1.038892037583292 0.990375516423357 0.9003922540302488 0.97039252992727 0.9601261978036673 0.9452408037644517 0.868053145466727 0.8714534649003561 1.0 23.353412059523205 -4.966394141081293 2.7388867326741897 0.9287672063145859 1.0477164712155755 0.5699211410565019 0.0401658721766038 0.19918411986472426 3.0097086598293012 0.011822898369181429 0.028185585141513526 1.0804529482950682e-05 4.966394141081293 0.11894926490098967 KGPSS(ph)TGASGQAK ddPTM_KYSE-520_SHP099_60min_R1 7 KGPSSTGASGQAK 13 1 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 KGPS(0.023)S(0.757)T(0.219)GASGQAK;KGPS(0.038)S(0.867)T(0.094)GAS(0.001)GQAK;KGPS(0.146)S(0.757)T(0.097)GASGQAK;KGPS(0.003)S(0.894)T(0.102)GAS(0.001)GQAK;KGPS(0.002)S(0.947)T(0.051)GASGQAK;KGPS(0.029)S(0.915)T(0.056)GASGQAK;KGPS(0.002)S(0.751)T(0.245)GAS(0.002)GQAK 263.59 4.1708e-22 8838240000.0 12057940.0 10773810.0 9070800.0 8478550.0 8604900.0 9717690.0 9422020.0 10251130.0 11507480.0 10234000.0 True False 11389062.031292532 10256219.995781489 9655518.281793147 9284348.842830988 9282056.674816325 9657038.292115912 10374489.731653798 10215571.222661719 9418011.711963993 10143334.721931526 1.1228124027759374 1.0111290100292052 0.9519076858339653 0.9153152387603583 0.9150892610047681 0.9520575389507592 1.022788857516698 1.007121573201563 0.9284926476497647 1.0 23.274028694844393 -4.332407732225294 2.502972490571285 0.9606212481665893 1.1448068922969052 0.6472911643821682 0.03606646291267955 0.29170579723676227 2.569036015417673 0.010486824798381714 0.10661048580672274 4.651491886626581e-05 4.332407732225294 0.1841856441303159 KGPST(ph)PYTK ddPTM_KYSE-520_SHP099_60min_R1 2 KGPSTPYTK 9 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 KGPS(0.29)T(0.71)PYTK;KGPS(0.377)T(0.622)PY(0.001)TK 72.705 0.035809 4611600000.0 16487000.0 16597700.0 14797400.0 12101800.0 14851200.0 15483300.0 13140100.0 14391500.0 17980600.0 16681400.0 True False 15572433.243980305 15800321.57834437 15751264.080677105 13251951.433461158 16019904.948230898 15386662.981461497 14468429.543017752 14341579.245501356 14715776.294040043 16533615.77393281 0.9418649530087712 0.9556482861574317 0.9526811494864194 0.8015156281999983 0.9689293114872164 0.930629040365168 0.8750916763064576 0.8674194103453488 0.8900519097124051 1.0 23.97889892959679 -5.1064430160605205 20.16848321641778 0.8998911026472881 0.9506883324544835 0.1314642037709154 0.052234892627799276 11.619145535189709 2185.5278300344057 0.013758622101384304 0.023830773437012228 7.826308876179702e-06 5.1064430160605205 0.050797229807195365 KGQAVDYEGSR ddPTM_KYSE-520_SHP099_60min_R1 2 KGQAVDYEGSR 11 1 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 ; 144.28 0.00019437 945380000.0 1823470.0 1747260.0 1192030.0 1179930.0 1519330.0 1839750.0 1464190.0 1514390.0 1520700.0 1473220.0 False True 1722318.4841026738 1663319.0069092729 1268870.161115435 1292070.1924411093 1638892.627194817 1828267.4378293892 1612204.6143173322 1509136.9345512816 1244579.213727388 1460168.416947816 1.1795341305236755 1.1391281906960442 0.8689889100380277 0.8848775096381816 1.1223997233282086 1.2520935370256872 1.1041223708202899 1.033536212011642 0.8523531938383703 1.0 20.477703349581834 -7.588785735553305 6.5139532520868375 0.9281639192187718 1.0735799941066868 0.2059138415622741 0.11795246475399497 0.38789848789045117 29.6028326972771 0.09086793305044277 0.03357175902061624 2.57759252987058e-08 7.588785735553305 0.14541607488791497 KGQGGAGAGDDEEED ddPTM_KYSE-520_SHP099_60min_R1 10 KGQGGAGAGDDEEED 15 1 P46781 P46781 RPS9 40S ribosomal protein S9 0 ;;;;;;;;; 112.59 0.00036906 38040210000.0 8383350.0 10184270.0 21645690.0 3938220.0 9047260.0 9100660.0 7011570.0 7799600.0 17973630.0 11452970.0 False True 7918308.863706099 9695002.382299071 23041005.81172853 4312507.244730982 9759227.890132206 9043859.405221581 7720367.921928821 7772545.008040322 14710071.870340643 11351505.596075837 0.6975558261137995 0.8540719378802569 2.0297753118928736 0.3799061902609462 0.8597298224039924 0.7967101217258794 0.680118408662699 0.6847148990286588 1.2958696752460614 1.0 23.43638032489403 KGQGTAATGNQAT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 KGQGTAATGNQATPK 15 1 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 KGQGTAATGNQAT(1)PK;KGQGTAATGNQAT(1)PK;KGQGTAATGNQAT(1)PK;KGQGTAATGNQAT(1)PK 123.6 0.00017601 3401320000.0 3153160.0 3034160.0 2383290.0 1988220.0 2025960.0 2741430.0 2007350.0 2591650.0 3371490.0 2997110.0 True False 2978247.9291313766 2888394.3992329924 2536920.6867988273 2177179.831019861 2185391.5258644344 2724319.718488176 2210272.5278480905 2582660.1710456572 2759312.4043465196 2970557.937116293 1.0025887365868207 0.9723407051393647 0.854021614963543 0.7329194976528168 0.7356838587655796 0.9171070809454888 0.7440597270402816 0.8694192221521886 0.9288869171241135 1.0 21.50230249614613 -4.756114747690163 4.018925895752046 0.8325734411575908 0.9941610999945573 0.291823366258262 0.08551534243750085 0.22470943530025828 8.076968870412998 0.022324227669690423 0.05894166208777167 1.753417159202436e-05 4.756114747690163 0.16158765883696646 KGQSEEIQK ddPTM_KYSE-520_SHP099_60min_R1 1 KGQSEEIQK 9 1 C9JXB8;C9JNW5;P83731 C9JXB8 RPL24 60S ribosomal protein L24 0 90.05 0.010140999999999999 415530000.0 664720.0 648910.0 499940.0 432440.0 592110.0 583630.0 532160.0 546750.0 561760.0 534260.0 False True 627846.6565135319 617735.3895662331 532166.932332283 473538.9675821727 638705.6883549476 579987.3486834435 585955.9261811046 544853.451862409 459758.5448171881 529526.8720479908 1.1856747781000818 1.1665798700207382 1.004985696522032 0.8942680581076461 1.2061818239453992 1.0952935144543137 1.1065650434601546 1.028943913186391 0.8682440289366852 1.0 19.014344373360125 -4.7457359075029695 15.28022784358103 1.0337398789265768 1.1761503371914168 0.28918995811201087 0.09372317495810974 3.5668275816871677 3460.332762742145 0.02505611901769759 0.06448885532313503 1.79582532807492e-05 4.7457359075029695 0.14241045826484 KGRPYDYNGPR ddPTM_KYSE-520_SHP099_60min_R1 2 KGRPYDYNGPR 11 2 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 ; 167.11 1.0223e-05 994650000.0 952000.0 970640.0 653330.0 691120.0 682130.0 893560.0 662750.0 846350.0 900580.0 546420.0 False True 899190.6622350494 924008.9974396558 695444.6971649607 756803.8370071944 735809.750211212 887982.9605907478 729747.2378166837 843414.2093895741 737057.3737743222 541579.143908327 1.660312573608365 1.7061384431673439 1.284105388819549 1.3974021073737997 1.3586375296899587 1.6396180882863844 1.3474433903610732 1.5573240197232165 1.3609412069588185 1.0 19.04681265655618 -12.240613335031016 0.2256840400257822 5.169653569984162e-15 1.545761901705672 0.5388247175505427 0.13806907321860207 54.4506282327085 1.1102933658989773 26.007940546854286 0.27453650047979455 5.746278423538193e-13 12.240613335031016 1.545761901705667 KGRS(ph)PDELPSAGGDGGK ddPTM_KYSE-520_SHP099_60min_R1 3 KGRSPDELPSAGGDGGK 17 2 A0A2R8Y5N1;A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610;B4E2I7 A0A2R8Y5N1 DIAPH1 Protein diaphanous homolog 1 1 KGRS(1)PDELPSAGGDGGK;KGRS(1)PDELPSAGGDGGK;KGRS(1)PDELPSAGGDGGK 126.51 4.8008000000000005e-05 1648170000.0 3192910.0 2875920.0 3177180.0 2411950.0 2833180.0 2972160.0 2675030.0 2517880.0 3769520.0 2789990.0 True False 3015792.9173917184 2737756.4863560717 3381986.106467737 2641181.0028207917 3056135.1474109017 2953609.646973225 2945448.1381769367 2509146.061957608 3085070.189866292 2765272.8591793724 1.090595059138826 0.9900493100592371 1.2230207573336476 0.9551249143654466 1.1051839377318613 1.0681078495269156 1.0651564196999472 0.9073773872362914 1.115647658286359 1.0 21.398990412591665 -7.040931171283796 24.96901823623168 1.004160876013717 1.0709537451506128 0.11251758183199001 0.08152635615872661 1043.466042244312 636535.5175287593 0.03567818990921413 0.020602511106036905 9.100574907332516e-08 7.040931171283796 0.06679286913689575 KGS(ph)CNLSR ddPTM_KYSE-520_SHP099_60min_R1 2 KGSCNLSR 8 1 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210 A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 1 KGS(0.991)CNLS(0.009)R;KGS(1)CNLSR 76.52199999999999 0.0099616 1376660000.0 1337410.0 1130290.0 1020260.0 1236810.0 1203140.0 1106970.0 1188740.0 1181970.0 1337600.0 1170950.0 True False 1263221.2012392625 1075989.1718001212 1086027.5920737186 1354356.050539515 1297820.2730698206 1100060.9896203286 1308909.4401843927 1177870.0219438728 1094725.5581520072 1160576.2939853151 1.088443050048415 0.9271162760918291 0.9357657895496012 1.1669685634270346 1.1182550253660808 0.9478575388118756 1.127809905275348 1.0149009832857887 0.9432603128509696 1.0 20.14640993503658 -5.159710815131312 19.602603852477166 1.0488464130123778 0.9781114589016621 0.10558733059509262 0.0815243711521113 14.374557462875046 2759.223914102292 0.022369686875066554 0.03874581613991805 6.922917957306838e-06 5.159710815131312 -0.07073495411071573 KGS(ph)DALRPPVPQGEDEVPK ddPTM_KYSE-520_SHP099_60min_R1 13 KGSDALRPPVPQGEDEVPK 19 2 Q8N3D4;E9PIH6 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK;KGS(1)DALRPPVPQGEDEVPK 222.47 4.7818e-19 54898980000.0 18754710.0 16590890.0 15628760.0 16934230.0 17021770.0 16521720.0 16711080.0 17484240.0 21258540.0 16520150.0 True False 17714348.849712536 15793838.740966411 16636214.876500156 18543654.127738107 18361286.45837699 16418601.817059144 18400399.050824072 17423591.25229231 17398525.020182993 16373794.323482217 1.081871953424246 0.9645802572660833 1.016026862670529 1.1325202797462786 1.1213825027742312 1.0027365369743693 1.1237712339183004 1.0641144568003118 1.0625835818171463 1.0 23.96488534261293 -5.145362417080497 12.610146454411971 1.0763832106077171 1.015023395614945 0.17142876500291504 0.05102399816513134 1.0210208944282773 105.94888627752012 0.013392220664211554 0.023205053957667608 7.155460405680642e-06 5.145362417080497 -0.0613598149927721 KGS(ph)DDAPYSPTAR ddPTM_KYSE-520_SHP099_60min_R1 5 KGSDDAPYSPTAR 13 1 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 KGS(1)DDAPYSPTAR;KGS(0.96)DDAPYS(0.04)PT(0.001)AR;KGS(1)DDAPYSPTAR;KGS(1)DDAPYSPTAR;KGS(1)DDAPYSPTAR 155.57 3.1785e-06 1276890000.0 2216240.0 1732430.0 1824610.0 1669110.0 1828420.0 1945950.0 1794580.0 2107220.0 2344870.0 1982400.0 True False 2093300.749235091 1649201.4623695537 1942227.2800792223 1827741.7125637797 1972306.2517132831 1933804.604236496 1975993.6598129985 2099910.545648847 1919100.71736236 1964837.4782838612 1.0653811179657633 0.8393576978234394 0.9884925860512457 0.930225391547486 1.0038012169006187 0.9842058824761067 1.0056779156812916 1.0687451602780713 0.9767223694442918 1.0 20.90597855408759 -6.078521366177929 1.4428285814979018 1.0158810430590297 0.9495474934670536 0.13535819464344445 0.057889234867377265 0.662191926718627 2.803963032282538 0.02321434449023581 0.024353503289182715 8.346004870575611e-07 6.078521366177929 -0.06633354959197613 KGS(ph)DDDGGDS(ph)PVQDIDTPEVDLYQLQVNTLRR ddPTM_KYSE-520_SHP099_60min_R1 1 KGSDDDGGDSPVQDIDTPEVDLYQLQVNTLRR 32 2 O75446 O75446 SAP30 Histone deacetylase complex subunit SAP30 2 KGS(1)DDDGGDS(1)PVQDIDTPEVDLYQLQVNTLRR 98.139 0.0009163999999999999 373210000.0 41989.0 49269.0 46961.0 61005.0 56010.0 47700.0 39944.0 41949.0 47006.0 40804.0 True False 39659.78646700367 46902.043285723266 49988.18120025667 66802.8968581779 60417.66834669334 47402.2866065834 43981.92933587273 41803.48870997021 38470.89532483045 40442.508305031624 0.9806460610176702 1.1597214231118296 1.236030683933554 1.6517990514912417 1.493914964200589 1.1720906687849004 1.08751734694954 1.0336522253929847 0.9512489936249608 1.0 15.303584857675853 -6.696378983274116 2.6355114492660596 1.0092402592189742 1.3119505275764212 0.37757313388935065 0.17268216969399539 0.33575791475671507 4.750181284730333 0.08698182159225783 0.06105723439582811 2.011967757546338e-07 6.696378983274116 0.30271026835744697 KGS(ph)DSDPSQEAHSQTEK ddPTM_KYSE-520_SHP099_60min_R1 2 KGSDSDPSQEAHSQTEK 17 1 Q8WYA1-9;Q8WYA1-6;Q8WYA1-4;Q8WYA1-3 Q8WYA1-9 ARNTL2 Aryl hydrocarbon receptor nuclear translocator-like protein 2 1 KGS(0.979)DS(0.02)DPS(0.001)QEAHSQTEK;KGS(0.992)DS(0.007)DPSQEAHSQTEK 220.48 2.8118999999999998e-15 812760000.0 603870.0 588510.0 575920.0 883330.0 725000.0 741630.0 762570.0 770250.0 976550.0 763730.0 True False 570372.1273149997 560237.096228481 613044.7247045801 967281.4176171513 782053.3753142782 737001.2120763201 839658.0175660038 767578.1825277013 799233.136822175 756963.9463729488 0.7534997274942641 0.740110673583465 0.8098730826508069 1.2778434458496404 1.0331448136487178 0.9736278928576695 1.1092443987448677 1.0140221158558627 1.0558404276078963 1.0 19.529865061797572 -5.087796972968956 7.419845449579535 1.0630717240134513 0.7534978280380242 0.7479046590741927 0.07990568708556556 0.1261466880115652 9.333244115874153 0.021545831310290624 0.03766088322979903 8.16964202257548e-06 5.087796972968956 -0.30957389597542706 KGS(ph)DSDPSQSGIMTEK ddPTM_KYSE-520_SHP099_60min_R1 1 KGSDSDPSQSGIMTEK 16 1 Q8WYA1-7;Q8WYA1-2;Q8WYA1 Q8WYA1-7 ARNTL2 Aryl hydrocarbon receptor nuclear translocator-like protein 2 1 KGS(1)DSDPSQSGIMTEK 192.94 2.0533e-12 588890000.0 450140.0 411500.0 432700.0 383130.0 436430.0 515470.0 507510.0 483890.0 607770.0 525130.0 True False 425169.8368681566 391730.92232590704 460592.53434447874 419542.56000776513 470774.5580529801 512252.7605261124 558814.0636202872 482211.4985307746 497414.2886349017 520477.7567449579 0.8168837791016234 0.7526372015891185 0.8849418219618099 0.806072026269794 0.9045046631717384 0.9841972185895432 1.073655994667443 0.9264785906442985 0.9556878890381523 1.0 18.989476983937603 -5.998315043080836 2.510838972010856 0.9888684652915973 0.8143784075233167 0.754789400232099 0.046356975424457936 0.14766602061697284 1.8748768642155544 0.01679373911066467 0.018325997984774134 1.0038872926831656e-06 5.998315043080836 -0.17449005776828064 KGS(ph)DSS(ph)IPDEEK ddPTM_KYSE-520_SHP099_60min_R1 1 KGSDSSIPDEEK 12 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 2 KGS(0.976)DS(0.322)S(0.702)IPDEEK 123.02 0.00012338 0.0 559710.0 490680.0 426830.0 515520.0 558790.0 542010.0 530970.0 551240.0 638220.0 526940.0 True False 528661.7705457768 467106.9962743039 454344.1447521464 564514.8658032606 602763.5939198139 538627.1145415984 584645.6293678241 549327.8771003827 522335.336216936 522271.721553116 1.01223510431248 0.8943754314042413 0.8699382447914878 1.0808834606716273 1.154118764323164 1.0313158693330078 1.1194280778389119 1.051804749196085 1.0001218037684116 1.0 18.994441065415703 -5.271433349745396 24.966719712971468 1.0695702404441727 0.9224021769176679 0.543357076875594 0.057282004951875715 462.95505603125355 1156543.5270119125 0.01614559967147546 0.02426549707183474 5.3526229303905484e-06 5.271433349745396 -0.1471680635265048 KGS(ph)FFK ddPTM_KYSE-520_SHP099_60min_R1 2 KGSFFK 6 1 Q9P2I0;H0YJF4 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 1 KGS(1)FFK;KGS(1)FFK 74.464 0.022259 218010000.0 1142510.0 1080080.0 958930.0 825870.0 863760.0 921550.0 910940.0 973950.0 1078460.0 1140120.0 True False 1079132.6927627812 1028191.3355668681 1020744.1621422485 904360.4364931292 931732.997877877 915798.2646183841 1003026.7051176626 970571.5947716389 882638.8497642133 1130019.4237999385 0.9549682687169752 0.9098881965314799 0.9032978908537448 0.8003052137387325 0.8245283030133412 0.8104270115453514 0.8876189948529954 0.8588981519520069 0.7810829010320427 1.0 20.10791614053013 -5.05521557818477 4.628068829888263 0.8445668583927571 0.927843038286047 0.23358715523188223 0.059076433822569926 0.2650710518035147 11.903880108140406 0.015271012349563478 0.028561307069744975 8.806116402274343e-06 5.05521557818477 0.08327617989328984 KGS(ph)FGLHAQPEFLR ddPTM_KYSE-520_SHP099_60min_R1 2 KGSFGLHAQPEFLR 14 1 Q9BZ71;Q9BZ71-3;Q9BZ71-2 Q9BZ71 PITPNM3 Membrane-associated phosphatidylinositol transfer protein 3 1 KGS(1)FGLHAQPEFLR;KGS(1)FGLHAQPEFLR 139.2 4.0880000000000005e-06 2035690000.0 812650.0 701270.0 679160.0 731670.0 804190.0 758440.0 659840.0 688520.0 889180.0 843580.0 True False 767570.6845223885 667579.9365722701 722939.7402944212 801207.6968153928 867475.1777848122 753706.2946309663 726543.0666178205 686131.6848217753 727727.3264037097 836106.5374953096 0.9180297606830928 0.7984388431791386 0.8646502662927411 0.9582602944542667 1.0375175158700138 0.9014476754228159 0.8689599160344997 0.820627101992519 0.870376314223942 1.0 19.67332725803886 -5.082423430761244 7.807823096281249 0.9164787828065776 0.8517013747157712 0.14912065167964628 0.06663959254472215 0.5961745217359413 50.623178125663834 0.019768555875444512 0.03450339286050422 8.271353256163985e-06 5.082423430761244 -0.06477740809080634 KGS(ph)FSALVGR ddPTM_KYSE-520_SHP099_60min_R1 2 KGSFSALVGR 10 1 A0A087WWN2;Q13619 A0A087WWN2 CUL4A Cullin-4A 1 KGS(0.984)FS(0.016)ALVGR;KGS(0.953)FS(0.047)ALVGR 132.97 0.00020543 4787270000.0 6412900.0 5331100.0 5091600.0 4542700.0 4454700.0 4801500.0 4700100.0 4653300.0 5185200.0 5378500.0 True False 6057163.65320079 5074985.953855765 5419812.68284804 4974436.84218744 4805259.54622416 4771532.057474008 5175231.976555562 4637158.78838839 4243698.388254926 5330850.674409685 1.1362471063535342 0.9520030223727374 1.0166881448894096 0.9331412838230153 0.9014057679933557 0.8950789187135478 0.9708079052746388 0.8698721970676638 0.7960640144407823 1.0 22.345934339799488 -1.0000000351073732 0.5369065408675521 0.8979929099951106 9.98919179317505 0.5608089062539696 0.05844253323636697 93.01012287298843 0.8892321966256322 0.02923412025114952 969.8024129619268 0.0999999919162289 1.0000000351073732 9.091198883179938 KGS(ph)GS(ph)EQEGEDEEGGER ddPTM_KYSE-520_SHP099_60min_R1 10 KGSGSEQEGEDEEGGER 17 1 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 2 KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER;KGS(1)GS(1)EQEGEDEEGGER 169.39 6.922999999999999e-08 5974236000.0 9621634.0 8782174.0 8157117.0 8619520.0 8768346.0 8222616.0 8589102.0 9066561.0 10353724.0 8394945.0 True False 9087902.78176815 8360265.178728073 8682937.81366867 9438716.589246808 9458364.945135795 8171295.603519465 9457372.25171747 9035111.216042256 8473748.717742097 8320572.3184683705 1.0922208754314424 1.0047704483225992 1.0435505493289197 1.1343830962560832 1.1367445150548088 0.9820593212539515 1.1366252091488773 1.0858761717613934 1.018409358564643 1.0 22.988251334784152 -9.565010519764572 11.664791141243683 1.0000028877212637 1.0714096459668616 0.13294771017413032 0.053980719529401866 0.0 0.0 0.052487449365517504 0.01273007633842867 2.722635357827421e-10 9.565010519764572 0.07140675824559795 KGS(ph)ITEYTAAEEK ddPTM_KYSE-520_SHP099_60min_R1 15 KGSITEYTAAEEK 13 1 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.985)IT(0.015)EYTAAEEK;KGS(0.998)IT(0.001)EYTAAEEK;KGS(0.996)IT(0.004)EYTAAEEK;KGS(0.997)IT(0.003)EYTAAEEK;KGS(0.999)IT(0.001)EYTAAEEK;KGS(0.5)IT(0.5)EYTAAEEK;KGS(0.991)IT(0.009)EYTAAEEK;KGS(0.986)IT(0.014)EYTAAEEK;KGS(0.81)IT(0.19)EYT(0.001)AAEEK;KGS(0.999)IT(0.001)EYTAAEEK;KGS(0.859)IT(0.141)EYTAAEEK;KGS(0.926)IT(0.074)EYTAAEEK;KGS(0.5)IT(0.5)EYTAAEEK;KGS(0.537)IT(0.46)EY(0.002)T(0.001)AAEEK;KGS(0.999)IT(0.001)EYTAAEEK 276.14 1.2291e-22 117579410000.0 33412510.0 28585380.0 26319280.0 28204400.0 28993440.0 28661030.0 30255790.0 31110870.0 33611690.0 29894960.0 True False 31559051.46411262 27212095.437269844 28015862.901136953 30884937.696037933 31275058.777892385 28482145.880500764 33314340.521254826 31002953.653301608 27508654.377752867 29630113.912326906 1.065100578333694 0.9183932102923471 0.9455199188242613 1.0423496105153003 1.0555159818295918 0.9612567121671255 1.124340615761021 1.0463325839730764 0.9284019109460306 1.0 24.820560836931023 -5.267818778864953 24.75277195948341 1.0275849232153715 0.9705434330198598 0.09995426354510117 0.06164072156837184 845.7039947004979 3281424.554375448 0.0171530056922883 0.02614220430099603 5.397357949109018e-06 5.267818778864953 -0.057041490195511746 KGS(ph)ITEYTAAEEKEDGR ddPTM_KYSE-520_SHP099_60min_R1 4 KGSITEYTAAEEKEDGR 17 2 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.722)IT(0.264)EYT(0.014)AAEEKEDGR;KGS(0.999)IT(0.001)EYTAAEEKEDGR;KGS(0.801)IT(0.094)EY(0.005)T(0.1)AAEEKEDGR;KGS(0.92)IT(0.073)EYT(0.007)AAEEKEDGR 183.01 2.1666e-10 4607210000.0 3249540.0 2914250.0 2720590.0 2922350.0 2820780.0 2826250.0 2725590.0 3119810.0 3707480.0 2804690.0 True False 3069281.5384026105 2774245.05562157 2895963.5844979077 3200089.265363434 3042759.33795725 2808610.32540579 3001119.2363949893 3108988.1072791247 3034295.089965164 2779842.628615801 1.1041206098529877 0.9979863705460843 1.0417724926896053 1.151176412801789 1.0945797098853636 1.010348678192734 1.0796004081315103 1.1184043568780073 1.091534843998009 1.0 21.40657178128664 KGS(ph)ITEYTAAEEKEDGRR ddPTM_KYSE-520_SHP099_60min_R1 5 KGSITEYTAAEEKEDGRR 18 3 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.977)IT(0.022)EYT(0.001)AAEEKEDGRR;KGS(0.986)IT(0.012)EYT(0.003)AAEEKEDGRR;KGS(0.959)IT(0.041)EYTAAEEKEDGRR;KGS(0.999)IT(0.001)EYTAAEEKEDGRR;KGS(0.99)IT(0.01)EYTAAEEKEDGRR 271.66 2.6148e-30 17794530000.0 6390530.0 6557460.0 6286800.0 5345320.0 5393490.0 4455360.0 4532950.0 4619050.0 8021900.0 4130090.0 True False 6036034.561694274 6242429.778651872 6692057.187235652 5853337.605670934 5817926.9782397235 4427552.445608119 4991184.8233287595 4603027.593644377 6565325.175642623 4093500.6157614025 1.4745410171561815 1.524961240903774 1.634800581553329 1.4299100342463724 1.4212595830176937 1.0816054182477706 1.2192949975653993 1.124472187916894 1.6038412576179506 1.0 21.964903681673594 -5.961344690904614 2.5897109212521627 1.2155524351827398 1.5296533047408762 0.46012763166578674 0.15854359860051692 0.256993419464705 3.494807451519142 0.053025078660819014 0.05919368152388612 1.0930884592974527e-06 5.961344690904614 0.31410086955813643 KGS(ph)LAALYDLAVLK ddPTM_KYSE-520_SHP099_60min_R1 3 KGSLAALYDLAVLK 14 1 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 KGS(1)LAALYDLAVLK;KGS(1)LAALYDLAVLK;KGS(1)LAALYDLAVLK 174.82 1.0214000000000001e-08 1183024000.0 2164192.0 2295567.0 2190900.0 2068501.0 1983420.0 2337340.0 1998357.0 2367704.0 2876424.0 1932145.0 True False 2044139.955550209 2185284.5156036867 2332128.919563944 2265090.7131224955 2139503.869883922 2322751.794067747 2200370.4276448674 2359490.987450268 2354137.9103482575 1915027.6984860625 1.0674205689903165 1.1411242340417727 1.2178042758376935 1.1827978858546941 1.1172182374047752 1.2129076753845458 1.1490018809568052 1.2320923552779832 1.2292970551858526 1.0 20.868933828408867 -4.360305151599232 3.3730188054930723 1.175802189188419 1.0632479935771137 0.15958013239146507 0.06666741291927174 0.4067873875981952 7.500850539785206 0.01582601211347259 0.09919782147109171 4.362092275654232e-05 4.360305151599232 -0.1125541956113052 KGS(ph)LSSVTPSPTPENEK ddPTM_KYSE-520_SHP099_60min_R1 1 KGSLSSVTPSPTPENEK 17 1 Q92870;Q92870-4 Q92870 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 1 KGS(0.798)LS(0.056)S(0.006)VT(0.127)PS(0.001)PT(0.012)PENEK 224.15 2.5774000000000002e-18 538120000.0 662020.0 517460.0 459460.0 412120.0 463540.0 469910.0 452650.0 479090.0 534040.0 476080.0 True False 625296.430895848 492600.44487670524 489077.5267619925 451287.76089160424 500017.9608181795 466977.11738573556 498408.2794382826 477428.14861044666 437071.79805285437 471862.30158463557 1.3251671701594743 1.0439495658424622 1.0364835781954687 0.9563971509825288 1.0596692279484712 0.9896470131593597 1.0562578908391256 1.0117954899281412 0.9262697964746374 1.0 18.84800638952374 -4.2079196972336605 2.6104505792165553 1.006711989901368 1.417789579532434 0.853958543366402 0.039502793115681105 0.21130000222824036 1.6520255524209206 0.009972856481561786 0.20110905310748353 6.195556227698617e-05 4.2079196972336605 0.4110775896310661 KGS(ph)MISVMSSEGNADTPVSK ddPTM_KYSE-520_SHP099_60min_R1 1 KGSMISVMSSEGNADTPVSK 20 1 H0Y465;P21359-2;P21359-6;P21359;P21359-4;J3KSB5 H0Y465;J3KSB5 NF1 Neurofibromin;Neurofibromin truncated 1 KGS(0.971)MIS(0.029)VMSSEGNADTPVSK 164.05 5.197300000000001e-09 163970000.0 201190.0 188090.0 131780.0 104150.0 117230.0 165210.0 122120.0 135550.0 182580.0 190150.0 True False 190029.5896376784 179053.874071154 140274.74965545489 114048.38468616072 126455.33405254179 164178.86310846213 134465.08137634632 135079.8086876079 149428.07446724965 188465.41893446137 1.008299510393262 0.95006221875335 0.7442996728446786 0.6051422342144418 0.6709736712840486 0.8711352142832905 0.7134734962869045 0.71673524751287 0.7928673350903335 1.0 17.52394030557758 -4.709966871852772 4.442719125578364 0.7466620985438693 0.9918789265317624 0.3967602334561646 0.10496043411613856 0.17748982556703274 7.2013558995952724 0.02656562388335629 0.07337410937500186 1.9499933403140106e-05 4.709966871852772 0.24521682798789302 KGS(ph)PAKPSEGR ddPTM_KYSE-520_SHP099_60min_R1 1 KGSPAKPSEGR 11 2 P56181-2 P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial 1 KGS(0.966)PAKPS(0.034)EGR 64.675 0.024036000000000002 443370000.0 591850.0 528170.0 423610.0 592070.0 533160.0 556400.0 539030.0 560810.0 643590.0 497670.0 True False 559018.9006762751 502795.92040066735 450916.5783999642 648340.154787663 575116.6587345654 552927.3012138997 593520.4128258426 558864.6810040377 526730.2795836198 493261.0309814007 1.1333125172366474 1.0193303115802517 0.9141540686942424 1.3143956527393097 1.1659478908972463 1.1209628705389234 1.2032582660036293 1.1329998639708287 1.0678530159490363 1.0 18.9119917892766 -5.245723878260386 24.988825988579705 1.1516425759525604 1.021972118966829 0.26466664621264335 0.09202758411769553 1043.681360571814 1659529.241043899 0.024628038785722683 0.04245904506711125 5.679055614853919e-06 5.245723878260386 -0.12967045698573143 KGS(ph)PTPGFSTR ddPTM_KYSE-520_SHP099_60min_R1 9 KGSPTPGFSTR 11 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 KGS(0.987)PT(0.013)PGFSTR;KGS(0.953)PT(0.047)PGFSTR;KGS(0.98)PT(0.019)PGFS(0.001)T(0.001)R;KGS(0.5)PT(0.5)PGFSTR;KGS(0.728)PT(0.272)PGFSTR;KGS(0.613)PT(0.386)PGFSTR;KGS(0.777)PT(0.114)PGFS(0.014)T(0.095)R;KGS(0.716)PT(0.284)PGFSTR;KGS(0.958)PT(0.042)PGFSTR 177.38 6.6573e-06 113070100000.0 53450200.0 48815700.0 44015000.0 43060600.0 45348400.0 44321200.0 45238800.0 45112400.0 52590600.0 42854600.0 True False 50485210.8556679 46470520.4981405 46852277.32648998 47153066.47735851 48917061.0828993 44044574.950685665 49811979.39214097 44955915.61371335 43041472.74113999 42474941.58437424 1.1885881174287591 1.0940690855531667 1.1030568984637774 1.1101384656101627 1.1516687076715133 1.0369543384348965 1.1727380317449545 1.0584102987972515 1.0133380090856716 1.0 25.34010862748939 -7.53909533557754 3.813473530607116 1.0096115693982064 1.118200070540028 0.5652055930977432 0.04100201907281482 0.16295028556799376 5.201367946026335 0.02814983771069309 0.01024866982888983 2.890045394933951e-08 7.53909533557754 0.1085885011418215 KGS(ph)QITQQSTNQSR ddPTM_KYSE-520_SHP099_60min_R1 7 KGSQITQQSTNQSR 14 1 P50750;P50750-2 P50750 CDK9 Cyclin-dependent kinase 9 1 KGS(0.775)QIT(0.187)QQS(0.036)T(0.002)NQS(0.001)R;KGS(1)QITQQSTNQSR;KGS(0.99)QIT(0.009)QQS(0.001)TNQSR;KGS(1)QITQQSTNQSR;KGS(0.999)QITQQSTNQSR;KGS(0.956)QIT(0.044)QQSTNQSR;KGS(0.615)QIT(0.385)QQSTNQSR 207.92 1.2137000000000002e-13 6721780000.0 2735930.0 2544060.0 2387220.0 2276166.0 2621613.0 2528850.0 2501663.0 2686650.0 2986180.0 2789530.0 True False 2584162.5089587593 2421839.538888089 2541104.0208870466 2492492.132285736 2827919.0281624678 2513066.50912072 2754555.509918067 2677330.638218824 2443964.9874718613 2764816.9344215007 0.9346595345197635 0.8759493291351765 0.9190858133320632 0.9015034960378869 1.0228232448070456 0.9089449930060357 0.9962885700041545 0.9683572915394552 0.8839518295207588 1.0 21.398752528429476 KGS(ph)S(ph)GNASEVSVACLTER ddPTM_KYSE-520_SHP099_60min_R1 12 KGSSGNASEVSVACLTER 18 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 2 KGS(0.999)S(1)GNAS(0.001)EVSVACLTER;KGS(0.945)S(0.878)GNAS(0.178)EVSVACLTER;KGS(0.833)S(0.945)GNAS(0.222)EVSVACLTER;KGS(0.998)S(0.912)GNAS(0.075)EVS(0.015)VACLTER;KGS(0.999)S(0.997)GNAS(0.004)EVSVACLTER;KGS(0.958)S(0.982)GNAS(0.009)EVS(0.051)VACLTER;KGS(0.99)S(0.856)GNAS(0.153)EVS(0.001)VACLTER;KGS(0.998)S(0.993)GNAS(0.006)EVS(0.003)VACLTER;KGS(1)S(0.985)GNAS(0.015)EVSVACLTER;KGS(0.99)S(0.987)GNAS(0.018)EVS(0.004)VACLTER;KGS(0.973)S(0.965)GNAS(0.049)EVS(0.013)VACLTER;KGS(0.996)S(0.996)GNAS(0.009)EVSVACLTER 217.42 3.0739999999999996e-18 11848000000.0 18656970.0 18112740.0 15939010.0 17092780.0 18783940.0 17366040.0 16818860.0 17853500.0 22496140.0 17699610.0 True False 17622030.682352375 17242576.782622974 16966464.087917693 18717272.67206831 20262129.21200119 17257652.102754556 18519074.505055502 17791570.375538237 18411408.05754013 17542805.22548823 1.0045161224699135 0.9828859501655386 0.9671465805974313 1.0669486682137743 1.1550107837121744 0.9837452950615121 1.055650693661515 1.0141804658292946 1.0495133372848426 1.0 24.064376128146044 -5.261375026868088 24.999999994318735 1.0493222911199378 0.9846531893038228 0.2813761248063935 0.04493656910643697 7.47259175360068 2902257.8469232037 0.012729282956015178 0.02034994156450997 5.478037149762435e-06 5.261375026868088 -0.06466910181611496 KGS(ph)SGNASEVSVACLTER ddPTM_KYSE-520_SHP099_60min_R1 18 KGSSGNASEVSVACLTER 18 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 KGS(0.95)S(0.05)GNASEVSVACLTER;KGS(0.5)S(0.5)GNASEVSVACLTER;KGS(0.989)S(0.011)GNASEVSVACLTER;KGS(0.485)S(0.485)GNAS(0.029)EVS(0.001)VACLTER;KGS(0.795)S(0.205)GNASEVSVACLTER;KGS(0.948)S(0.05)GNAS(0.001)EVSVACLTER;KGS(0.755)S(0.245)GNASEVSVACLTER;KGS(0.98)S(0.02)GNASEVSVACLTER;KGS(0.772)S(0.228)GNASEVSVACLTER;KGS(0.961)S(0.039)GNASEVSVACLTER;KGS(0.967)S(0.033)GNASEVSVACLTER;KGS(0.978)S(0.022)GNASEVSVACLTER;KGS(0.847)S(0.153)GNASEVSVACLTER;KGS(0.792)S(0.208)GNASEVSVACLTER;KGS(0.931)S(0.069)GNASEVSVACLTER;KGS(0.99)S(0.01)GNASEVSVACLTER;KGS(0.499)S(0.499)GNAS(0.001)EVSVACLTER;KGS(0.849)S(0.151)GNASEVSVACLTER 284.24 9.833300000000001e-38 203075888000.0 40573520.0 40883910.0 37860537.0 36955790.0 38698396.0 39310608.0 39262270.0 44087100.0 50970610.0 42891240.0 True False 38322825.96429313 38919785.59559999 40301087.794021085 40468057.170436606 41743739.601446256 39065255.9139424 43231283.41442907 43934172.14010655 41715632.08851544 42511256.982479736 0.9014747783178279 0.9155171678795593 0.9480097897512291 0.951937440643423 0.981945549590552 0.9189390925335953 1.0169373122099419 1.0334714910503175 0.9812843714714857 1.0 25.341341581753188 -5.160760928865589 0.3971226346394998 1.0126889635584477 0.8678209533562363 0.626665410794227 0.02608670297512295 1.9336466292261882 0.40307543521328715 0.025134839621648607 0.12531799474191524 6.906198727736161e-06 5.160760928865589 -0.1448680102022114 KGS(ph)STDISEDWEK ddPTM_KYSE-520_SHP099_60min_R1 4 KGSSTDISEDWEK 13 1 Q9NW68-9;Q9NW68-4;Q9NW68-8;Q9NW68;Q9NW68-7;Q9NW68-3 Q9NW68-9 BSDC1 BSD domain-containing protein 1 1 KGS(0.699)S(0.256)T(0.045)DISEDWEK;KGS(0.93)S(0.066)T(0.005)DISEDWEK;KGS(0.415)S(0.415)T(0.15)DIS(0.019)EDWEK;KGS(0.977)S(0.02)T(0.004)DISEDWEK 210.57 2.4616e-11 1252750000.0 2460280.0 2121310.0 1829900.0 2269020.0 2305810.0 2653960.0 2969350.0 3427530.0 3095210.0 2957110.0 True False 2323803.3639534144 2019399.0834487737 1947858.2819435229 2484666.978594259 2487264.128735744 2637395.651203525 3269520.876063327 3415640.698421514 2533197.8878944917 2930912.305996764 0.7928600795045351 0.6890001721706249 0.6645911165469287 0.8477452476181326 0.8486313710740174 0.8998548492246963 1.1155300925837175 1.165384815994998 0.8643035421808655 1.0 21.48291837201684 -6.111094657626117 1.2582360404206054 1.0450743862454068 0.7231745088586545 0.6694444078893601 0.08975072898952077 0.25604081060183786 0.8361464759298816 0.04207520187379609 0.04328572881984158 7.742930166416929e-07 6.111094657626117 -0.3218998773867523 KGS(ph)STDISEDWEKDFDLDMTEEEVQMALSK ddPTM_KYSE-520_SHP099_60min_R1 3 KGSSTDISEDWEKDFDLDMTEEEVQMALSK 30 2 Q9NW68-9;Q9NW68-4;Q9NW68-8;Q9NW68;Q9NW68-7;Q9NW68-3 Q9NW68-9 BSDC1 BSD domain-containing protein 1 1 KGS(0.374)S(0.273)T(0.273)DIS(0.081)EDWEKDFDLDMTEEEVQMALSK;KGS(0.248)S(0.248)T(0.248)DIS(0.248)EDWEKDFDLDMT(0.006)EEEVQMALSK;KGS(0.704)S(0.148)T(0.148)DIS(0.001)EDWEKDFDLDMTEEEVQMALSK 242.83 2.8121999999999997e-31 278396500.0 243934.0 269138.0 229891.0 260161.0 260536.0 273096.0 274218.0 324905.0 479840.0 285488.0 True False 230402.4947496265 256208.206495626 244710.1416986051 284886.6232197434 281038.70095293864 271391.5065641825 301938.6315497779 323777.98038839694 392713.1517820413 282958.79842630285 0.8142616381997227 0.9054611763993474 0.8648260561593398 1.00681309365237 0.9932142153414455 0.959120225536535 1.0670763136860661 1.144258394469842 1.3878810412192366 1.0 18.11023247225207 -6.860559449345692 1.2416111248751398 1.2050314191664182 0.9094841433953861 0.5588397314881568 0.1022933203493778 0.33777394325096244 1.0236025886981908 0.06992703737507347 0.03666276197250426 1.3786072264003698e-07 6.860559449345692 -0.2955472757710321 KGS(ph)VDQYLLR ddPTM_KYSE-520_SHP099_60min_R1 1 KGSVDQYLLR 10 1 Q8NCN4;H0YEQ1 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 KGS(1)VDQYLLR 81.904 0.0088897 71387000.0 207070.0 192260.0 163410.0 157990.0 193820.0 219470.0 222040.0 293610.0 282870.0 256100.0 True False 195583.41431618886 183023.54101185632 173943.6700652446 173005.3220985743 209072.5313150527 218100.20632173697 244485.97010157193 292591.5354390892 231507.93857241204 253831.15324278479 0.7705256498957673 0.7210444371136655 0.6852731346922996 0.6815763939467979 0.8236677359893595 0.8592334058898128 0.9631834665610397 1.1527014383424827 0.9120548664528147 1.0 17.953509619544455 -6.463560812481432 1.443070558407607 1.0281847683788186 0.7166121947440265 0.7997568194258535 0.06477504788192957 0.16637329081934935 0.7002475371842638 0.032077537452114446 0.02460940578280407 3.439055523199378e-07 6.463560812481432 -0.31157257363479207 KGS(ph)VSHDTVQPR ddPTM_KYSE-520_SHP099_60min_R1 3 KGSVSHDTVQPR 12 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;F2Z3L2;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 KGS(0.883)VS(0.117)HDTVQPR;KGS(0.874)VS(0.123)HDT(0.003)VQPR;KGS(0.998)VS(0.002)HDTVQPR 108.14 0.00024177 416820000.0 151947.0 229776.0 227241.0 574233.0 158420.0 186887.0 210969.0 187642.0 267082.0 207306.0 True False 143518.19701116503 218737.21605919226 241889.31845845532 628807.9316705526 170886.7527135006 185720.56891078714 232295.805379024 186991.11369797192 218586.64138931964 205469.43012162764 0.6984892931576704 1.0645730410100946 1.1772521017616535 3.0603478643919426 0.8316894275335469 0.9038841875448326 1.1305613941768198 0.910067807105332 1.0638402085406442 1.0 17.648564239182683 KGS(ph)VVNVNPTNTRPQSDTPEIR ddPTM_KYSE-520_SHP099_60min_R1 4 KGSVVNVNPTNTRPQSDTPEIR 22 2 O95819-3;E7EX83;G5E948;C9J840;H7C360;E7ENQ1;H7C0P6;G3XAA2;A0A0D9SG62;A0A0D9SEY1;O95819-4;O95819-2;O95819;O95819-5;O95819-6;E7EN19 O95819-3 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 KGS(1)VVNVNPTNTRPQSDTPEIR;KGS(0.943)VVNVNPT(0.045)NT(0.011)RPQSDTPEIR;KGS(1)VVNVNPTNTRPQSDTPEIR;KGS(0.993)VVNVNPT(0.005)NT(0.001)RPQSDT(0.001)PEIR 178.91 2.4913e-10 10416700000.0 5695120.0 5005120.0 3836430.0 3170620.0 2511420.0 3119940.0 3246300.0 3464190.0 3660470.0 4377830.0 True False 5379200.340659748 4764666.522361712 4083732.4163050344 3471954.7715183347 2709054.4659748706 3100467.2971770167 3574467.68483486 3452173.533438024 2995820.9209395004 4339045.832100202 1.2397196408630895 1.0980908491707493 0.9411590875794944 0.8001654985602734 0.6243433627580798 0.7145504834818295 0.8237911797084503 0.795606607309582 0.6904331129153921 1.0 22.048946394334433 -4.818723569037696 1.6253340759130344 0.7612270351598357 1.2367387003639372 0.7319097419890712 0.09545974634037618 0.21531626527983339 1.0238236594853578 0.02786770694679852 0.11667756957653672 1.5180162862107417e-05 4.818723569037696 0.4755116652041015 KGS(ph)WSER ddPTM_KYSE-520_SHP099_60min_R1 5 KGSWSER 7 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0U1RQT6 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 KGS(0.925)WS(0.075)ER;KGS(0.925)WS(0.075)ER;KGS(0.994)WS(0.006)ER;KGS(0.992)WS(0.008)ER;KGS(0.811)WS(0.189)ER 135.86 0.0011780999999999999 5769810000.0 7446220.0 6624140.0 5940280.0 6304200.0 6831960.0 6380690.0 6284980.0 6576390.0 7227590.0 6327860.0 True False 7033163.332928439 6305906.371363145 6323199.953584055 6903349.272573152 7369596.383465017 6340865.746913215 6920327.113893784 6553578.038030959 5915241.848717002 6271800.083400582 1.121394693613232 1.0054380381244663 1.0081953935871637 1.1006966390469102 1.1750368770474597 1.0110120958248379 1.1034036515624346 1.0449277641001586 0.9431489795685175 1.0 22.580448142922183 -7.61533176314646 5.147319473440552 0.9733883553383561 1.0722996308041508 0.36531713349255857 0.05363918075230007 0.23669869653558495 10.102894387430565 0.03973152980039899 0.014151348604667468 2.4247570842466303e-08 7.61533176314646 0.0989112754657947 KGSDDAPYS(ph)PTAR ddPTM_KYSE-520_SHP099_60min_R1 3 KGSDDAPYSPTAR 13 1 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 KGSDDAPYS(0.963)PT(0.037)AR;KGSDDAPYS(0.986)PT(0.014)AR;KGSDDAPYS(0.993)PT(0.007)AR 138.56 8.5375e-06 1316060000.0 2333730.0 2097940.0 1973510.0 1840530.0 1851930.0 1842490.0 1918120.0 2013090.0 2354490.0 1799730.0 True False 2204273.3447245825 1997151.813327858 2100725.6123276427 2015453.4178244753 1997666.354959683 1830990.3364730366 2112022.288647213 2006107.060648739 1926973.9678628284 1783785.7923687522 1.2357276048249326 1.1196141497885626 1.1776781838462873 1.1298741286351897 1.1199026046209906 1.0264631237148716 1.1840111619246525 1.124634510057824 1.0802720686007548 1.0 20.76651094756331 -4.186217956604933 0.017376964613428234 1.0442860547674766e-07 2.347199184495063 0.5243895442089161 0.046602533823729676 1835.3153859260563 4.868330786037814 288.1412871198079 373.3754987867664 6.513014475181056e-05 4.186217956604933 2.3471990800664577 KGSIS(ph)S(ph)TQDTPVAVEEDCSLASSK ddPTM_KYSE-520_SHP099_60min_R1 1 KGSISSTQDTPVAVEEDCSLASSK 24 1 Q9BZ71;Q9BZ71-3 Q9BZ71 PITPNM3 Membrane-associated phosphatidylinositol transfer protein 3 2 KGS(0.377)IS(0.548)S(0.558)T(0.514)QDT(0.002)PVAVEEDCSLASSK 123.89 9.671799999999999e-05 376560000.0 304730.0 285350.0 263400.0 282320.0 267310.0 283710.0 259140.0 301990.0 427530.0 291330.0 True False 287826.0194358052 271641.357680918 280379.1854549011 309151.60791739693 288345.77621415124 281939.26065311895 285336.4001626792 300942.4671749962 349901.3291542521 288749.04285131 0.9968033715146197 0.9407524090765506 0.9710133847933864 1.0706584682138431 0.99860340095615 0.9764162605321683 0.9881812848453732 1.0422284493249911 1.2117835117272828 1.0 18.13945663871111 -7.529330606711028 24.912757193695896 1.1129298740290934 0.9933978301837894 0.39196206669712774 0.056675647163651637 148.7212583525755 574242.1935542794 0.036395790595164734 0.013831218274815317 2.9557615361807283e-08 7.529330606711028 -0.11953204384530403 KGSIT(ph)EYTAAEEK ddPTM_KYSE-520_SHP099_60min_R1 3 KGSITEYTAAEEK 13 1 J3KN59;Q12982;Q12982-2 J3KN59 BNIP2 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 1 KGS(0.269)IT(0.729)EYT(0.002)AAEEK;KGS(0.132)IT(0.868)EYTAAEEK;KGS(0.083)IT(0.916)EYT(0.001)AAEEK 289.65 4.1813e-30 29360700000.0 4185480.0 3833740.0 3373520.0 3484950.0 3667440.0 3550150.0 3790360.0 4049540.0 3954560.0 3604400.0 True False 3953303.080852476 3649561.3758389414 3590982.497022844 3816158.6002115738 3956046.6631208183 3527992.1969887195 4173526.5791487754 4035493.090909739 3236511.590345095 3572467.820180765 1.1066028526612288 1.0215799160520571 1.0051826014324021 1.068213568966026 1.1073708322222604 0.9875504481969568 1.1682474942314798 1.129609360821491 0.9059596204232091 1.0 21.768489585298948 -7.764740458989511 24.999999634191774 0.9529797981317648 1.0713738703728843 0.4111183020300365 0.057992786529420436 90.81651079481809 687725.0794576072 0.049772520164965486 0.014903525931310306 1.7189353422595374e-08 7.764740458989511 0.11839407224111953 KGSLLPTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 KGSLLPTSPR 10 1 Q9H0E9-2;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;H7C128 Q9H0E9-2 BRD8 Bromodomain-containing protein 8 1 KGSLLPT(0.044)S(0.956)PR;KGS(0.002)LLPT(0.078)S(0.92)PR 105.13 0.001438 1710400000.0 3786200.0 3466700.0 2949200.0 3027800.0 3372900.0 3171100.0 3087100.0 3700100.0 4273900.0 3521900.0 True False 3576171.938397419 3300154.5283772172 3139310.150886845 3315561.201658739 3638328.040824174 3151307.9886401813 3399174.1951925885 3687265.2167098303 3497867.4962513866 3490698.705996738 1.0244859953836305 0.9454137427294481 0.8993357534678557 0.9498273786743248 1.0422922020092484 0.9027728412155679 0.9737804610157509 1.0563115087462023 1.0020536834767015 1.0 21.735084407703535 -7.073934160743594 7.376376782479654 1.0210825997506159 0.9586321888234818 0.25409913994639743 0.0450293279829293 0.3801033493271293 33.33558927630646 0.021462919350276357 0.012384391534846956 8.434626174186167e-08 7.073934160743594 -0.0624504109271341 KGSLSS(ph)VTPS(ph)PTPENEKQPWSDFAVLNGGK ddPTM_KYSE-520_SHP099_60min_R1 1 KGSLSSVTPSPTPENEKQPWSDFAVLNGGK 30 2 Q92870;Q92870-4 Q92870 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 2 KGS(0.209)LS(0.334)S(0.376)VT(0.081)PS(0.98)PT(0.019)PENEKQPWSDFAVLNGGK 117.77 0.00015359 312170000.0 300210.0 271200.0 194180.0 238670.0 244090.0 286690.0 203960.0 262730.0 293990.0 230240.0 True False 283556.7528462023 258171.14492050096 206697.15349898496 261353.125041248 263298.4943178787 284900.66136774415 224578.2672577757 261818.65095164266 240608.8268847996 228200.25272400968 1.242578610064652 1.1313359290304499 0.9057709228261415 1.1452797353267357 1.1538045693416368 1.2484677732250768 0.984128039198035 1.1473197239106119 1.0543758125272418 1.0 17.799940863799925 -8.14511880877552 1.0470098787897053 0.9995050787931143 1.1183177392009984 0.12699164803058394 0.09965322215548045 1.695418261422984 3.9318297609283173 0.09781391702767415 0.03174830789218966 7.159475235780206e-09 8.14511880877552 0.11881266040788407 KGSPT(ph)PGFSTR ddPTM_KYSE-520_SHP099_60min_R1 1 KGSPTPGFSTR 11 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 KGS(0.279)PT(0.721)PGFSTR 171.21 1.3882e-05 9901300000.0 5594400.0 5215200.0 4740100.0 4856100.0 4884400.0 4845500.0 4277600.0 4677600.0 5234900.0 4183900.0 True False 5284067.479840091 4964653.963825207 5045654.430428161 5317622.283960294 5268774.491565595 4815257.437153042 4710021.553352917 4661374.497360052 4284374.121089969 4146833.9010249428 1.2742414106661148 1.1972155341447677 1.2167486209614191 1.2823330788932674 1.2705535397169756 1.161188885805841 1.1358114807030912 1.124080348674668 1.0331675257190869 1.0 21.983578831430197 -7.243526479745552 0.8238011163697662 1.0027052245470802 1.2464466023000231 0.8785806573038913 0.03259443520457798 0.21656079226936903 0.2710434031813134 0.03191901495243085 0.014213710845542944 5.707862732059284e-08 7.243526479745552 0.2437413777529429 KGSS(ph)GNASEVSVACLTER ddPTM_KYSE-520_SHP099_60min_R1 1 KGSSGNASEVSVACLTER 18 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 KGS(0.289)S(0.71)GNASEVSVACLTER 233.38 2.0077e-23 8429800000.0 1242400.0 1177900.0 1246800.0 1255200.0 1213500.0 1111400.0 1230000.0 1365000.0 1598500.0 1329800.0 True False 1173481.5953370014 1121311.9159360544 1327170.722950534 1374493.8306103584 1308995.5461294854 1104463.3403471038 1354340.4036431874 1360265.1335933944 1308252.6949057865 1318019.0065687445 0.8903373847331507 0.8507554977186663 1.0069435390052641 1.0428482622482336 0.9931537706252428 0.8379722407967398 1.027557566995183 1.032052744925607 0.9925901587046282 1.0 20.3299397442868 -4.762398495223355 24.999954547934042 0.9904621299052819 0.87054641429077 0.436602068986891 0.055010069449728076 23.334072367102554 608295.3967707535 0.015198297016105243 0.03487350321508468 1.728229861042029e-05 4.762398495223355 -0.11991571561451198 KGSS(ph)TDISEDWEKDFDLDMTEEEVQMALSK ddPTM_KYSE-520_SHP099_60min_R1 1 KGSSTDISEDWEKDFDLDMTEEEVQMALSK 30 2 Q9NW68-9;Q9NW68-4;Q9NW68-8;Q9NW68;Q9NW68-7;Q9NW68-3 Q9NW68-9 BSDC1 BSD domain-containing protein 1 1 KGS(0.236)S(0.337)T(0.337)DIS(0.09)EDWEKDFDLDMTEEEVQMALSK 182.92 4.0979e-12 84960000.0 126350.0 116290.0 103180.0 109020.0 118730.0 126310.0 120890.0 155550.0 212600.0 124550.0 True False 119341.11362751946 110703.25384515144 109831.14789383717 119381.22802194192 128073.37551870929 125521.65243768432 133110.74097270318 155010.4333556428 173997.199209866 123446.5838984336 0.9667429414305062 0.8967704925413991 0.8897058502987931 0.9670678948893678 1.0374801106208205 1.0168094448118385 1.0782861442502194 1.2556883184647583 1.4094938370511996 1.0 16.913527388187823 -6.87211523138038 1.5088282685191994 1.2477258520127439 0.9450422099255533 0.5570338803362181 0.10290388875037511 0.2776471555896762 1.263383847579298 0.06362722622758804 0.0343125326784738 1.3424087324930682e-07 6.87211523138038 -0.30268364208719056 KGSWS(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 2 KGSWSER 7 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0U1RQT6 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 KGS(0.306)WS(0.694)ER;KGS(0.31)WS(0.69)ER 137.46 0.0011444 6668600000.0 5245900.0 4720400.0 4156800.0 4285500.0 4287600.0 4316000.0 4291700.0 4709800.0 5009800.0 4379100.0 True False 4954899.469557612 4493624.89853515 4424753.979115152 4692792.631517439 4625009.726893098 4289062.243061087 4725546.918955659 4693462.803075581 4100146.606780742 4340304.580888243 1.1416017878965516 1.0353247830398875 1.0194570211958778 1.0812127453408025 1.0655956605576722 0.988193838272827 1.088759286563381 1.0813671519142705 0.9446679444652354 1.0 22.049364856675634 -1.0000000000000009 0.12703742372119656 0.9844049688643616 1.3224799193018755 0.2596305971371814 0.04741677051553283 149.82770263838228 1.2968917577807002 0.27843805920389303 9.03925967936191 0.0999999999999998 1.0000000000000009 0.3380749504375139 KGT(ph)TPPRS(ph)PEASPK ddPTM_KYSE-520_SHP099_60min_R1 1 KGTTPPRSPEASPK 14 2 Q9HDC5 Q9HDC5 JPH1 Junctophilin-1 2 KGT(0.535)T(0.466)PPRS(0.996)PEAS(0.003)PK 76.155 0.057661000000000004 749480000.0 844710.0 836700.0 750960.0 971210.0 885440.0 911390.0 943880.0 948460.0 1113300.0 759130.0 True False 797852.2524123618 796503.6760876959 799368.0831784836 1063513.5063950666 955119.0905355513 905701.6769470443 1039296.6017810811 945170.0136322282 911152.7840091416 752404.6987942024 1.0604030699050568 1.0586107149040485 1.062417718097115 1.413485997760839 1.2694220172550987 1.203742717713638 1.3812999884857833 1.2561989779528888 1.2109876313496548 1.0 19.521149333008083 -5.2226200262316755 21.831442297918596 1.2631697601947076 1.060289971647593 0.3913390164552034 0.10590450431796126 110.93312577004525 62386.02836200431 0.027148653949165626 0.04701970415661848 5.989353875961767e-06 5.2226200262316755 -0.20287978854711453 KGTDVPK ddPTM_KYSE-520_SHP099_60min_R1 1 KGTDVPK 7 1 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 71.692 0.06379299999999999 1266600000.0 583730.0 563010.0 216050.0 271830.0 729740.0 947810.0 432190.0 461760.0 504370.0 1224100.0 False True 551349.3332630948 535962.1545047611 229976.9286922223 297664.64147133066 787166.3863473666 941894.3662177327 475879.98296792584 460158.2623355939 412789.12213302 1213255.4263353876 0.4544379701877236 0.44175541511784 0.18955359580534725 0.2453437545055293 0.6488051644038272 0.7763364133987058 0.3922339621470404 0.3792756680474879 0.3402326609655815 1.0 20.210451881954327 -5.76053900571915 24.99995605628236 0.5579248875272588 0.33032722103711215 0.2692267088132865 0.20322681094700312 38.99015726515115 1082585.226881152 0.06327974905734017 0.07702315072704463 1.7356453706393557e-06 5.76053900571915 -0.22759766649014662 KGTENGVNGTLTSNVADS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 KGTENGVNGTLTSNVADSPR 20 1 G3XAN4;Q15629-2;Q15629 G3XAN4 TRAM1 Translocating chain-associated membrane protein 1 1 KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR;KGTENGVNGTLTSNVADS(1)PR 212.28 7.1649e-19 9338400000.0 6133290.0 7249730.0 5954900.0 7402850.0 6410990.0 6017030.0 6148030.0 7692820.0 9709660.0 5169030.0 True False 5793064.177289503 6901442.088733419 6338762.382176882 8106414.638251981 6915498.439456663 5979475.483866052 6769532.871390592 7666135.40293768 7946630.5046099 5123236.415644486 1.130743090363663 1.3470863978985907 1.2372574419600517 1.5822839276942133 1.3498300446060356 1.1671285489787129 1.3213391540392163 1.496346211845331 1.5510958034932376 1.0 22.288624036913678 -10.458840232507729 5.083269499687819 0.9993709735306536 1.3544295173429273 0.34817638990332034 0.14517307701976845 0.0010732411050330098 0.00011425610469146891 0.14577032820601565 0.035293794635761724 3.4766403595639955e-11 10.458840232507729 0.35505854381227364 KGTT(ph)PPRS(ph)PEASPK ddPTM_KYSE-520_SHP099_60min_R1 1 KGTTPPRSPEASPK 14 2 Q9HDC5 Q9HDC5 JPH1 Junctophilin-1 2 KGT(0.454)T(0.546)PPRS(1)PEASPK 94.85600000000001 0.0078254 1045400000.0 544890.0 600650.0 489630.0 619790.0 583960.0 600460.0 532300.0 615930.0 749860.0 502670.0 True False 514663.8654887143 571793.8724059697 521192.3332356992 678694.6552533421 629914.3297221042 596712.3064106718 586110.0787473725 613793.4825891422 613704.3264323141 498216.7348713424 1.0330119995299216 1.147680983766287 1.046115669659892 1.3622478085337812 1.264337959030563 1.1976962326742486 1.1764158803271176 1.231980862199753 1.2318019116535592 1.0 18.92641395629338 -5.225287403282975 24.99947071555751 1.2193280911899604 1.0828106670036792 0.3107426355343307 0.09012016547446082 683.3743186879046 472559.8295714722 0.023384538464348133 0.040501366661757646 5.952680822889245e-06 5.225287403282975 -0.1365174241862812 KGTVEGFEPADNK ddPTM_KYSE-520_SHP099_60min_R1 1 KGTVEGFEPADNK 13 1 H0YLA2;P37108 H0YLA2 SRP14 Signal recognition particle 14 kDa protein 0 130.47 9.2593e-05 548680000.0 1054800.0 1013100.0 624780.0 679530.0 890840.0 1017400.0 734550.0 1014500.0 841360.0 863400.0 False True 996288.1413083299 964429.1553058968 665054.3184833442 744112.3268918553 960944.0398137531 1011050.0292146313 808805.4825171569 1010980.936286079 688590.2329596081 855750.9477150348 1.164226746074366 1.126997472665437 0.7771587285519517 0.8695430941429058 1.1229248911492267 1.181476961158226 0.9451412057173546 1.1813962216291178 0.8046619577789924 1.0 19.70683145940844 -8.028103233248954 0.005560362634805136 2.0934400952254959e-07 2.017814373604258 0.015317107390645401 0.1501247836492376 51270.30817368641 184.07877343993306 33649.73015846636 33136.47271358455 9.373391717906198e-09 8.028103233248954 2.0178141642602485 KGVAINMVTEEDKR ddPTM_KYSE-520_SHP099_60min_R1 3 KGVAINMVTEEDKR 14 2 P60842 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 ;; 192.4 5.4596e-11 6397700000.0 3085770.0 2904160.0 1968760.0 2015660.0 2854280.0 2703060.0 2197280.0 2656570.0 2567420.0 2311550.0 False True 2914596.1867700103 2764639.794366968 2095669.4197273736 2207227.720369721 3078895.597368327 2686189.199890802 2419402.5057862615 2647354.9787180987 2101241.2473913156 2291071.4653586857 1.2721541998314343 1.2067016835435735 0.9147115013277335 0.9634041337179159 1.3438671136722053 1.1724598034178988 1.0560135475335268 1.1555095590628528 0.9171434759510435 1.0 21.127591030633944 -7.758132012433805 24.999400701674343 0.9585717007963265 1.130387424521562 0.2409729383937501 0.12540338586326735 126.22965753498038 954190.5671957956 0.09892720719910648 0.03390425663269649 1.745291556248093e-08 7.758132012433805 0.17181572372523546 KGVEFPMADLDALS(ph)PIHT(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 1 KGVEFPMADLDALSPIHTPQR 21 1 Q6ZVM7-2;Q6ZVM7;Q6ZVM7-5 Q6ZVM7-2 TOM1L2 TOM1-like protein 2 2 KGVEFPMADLDALS(1)PIHT(1)PQR 160.26 3.4399e-09 734600000.0 610140.0 609520.0 494750.0 500610.0 508980.0 500460.0 417560.0 468220.0 718350.0 454340.0 True False 576294.3179160638 580237.7442918279 526642.3766279892 548187.8238861158 549033.8302999464 497336.44350378914 459771.03979288513 466595.85410336964 587915.7481298546 450314.9010711711 1.2797584902147887 1.288515531934669 1.16949800101053 1.2173432915103028 1.219221991086573 1.104419246000448 1.020998946957386 1.0361545953586497 1.3055658312247056 1.0 18.780574692169413 -6.252686832245943 3.8697635170449454 1.0895554083885017 1.2351616846230338 0.412600093211943 0.08469190368966456 0.23859459781896442 8.219660290875947 0.030137297764847915 0.028370719865208442 5.588730502576398e-07 6.252686832245943 0.14560627623453204 KGVEPSPS(ph)PIKPGDIK ddPTM_KYSE-520_SHP099_60min_R1 3 KGVEPSPSPIKPGDIK 16 2 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 KGVEPS(0.003)PS(0.997)PIKPGDIK;KGVEPS(0.162)PS(0.838)PIKPGDIK;KGVEPS(0.014)PS(0.986)PIKPGDIK 179.42 8.3279e-09 4550800000.0 6646500.0 6249800.0 4969400.0 4230500.0 4912200.0 5593400.0 4857700.0 5354600.0 5979100.0 5748700.0 True False 6277805.395530733 5949550.226858953 5289735.475321129 4632565.4480538 5298762.193405237 5558489.515833616 5348763.722583333 5336026.142373034 4893446.160845286 5697770.990420919 1.1018002313685418 1.0441890761951165 0.9283868172684058 0.8130487265708045 0.9299710715494718 0.9755550942953898 0.9387467013987862 0.9365111639874523 0.8588351776637106 1.0 22.441966206145004 -4.674937897137391 3.399678957171775 0.9185490228268983 1.0902022211685998 0.5938131758970004 0.050681940653450545 0.15836220659424347 3.504312674031677 0.01371887243815912 0.0429075488790749 2.113791284304021e-05 4.674937897137391 0.17165319834170145 KGVEPSPS(ph)PIKPGDIKR ddPTM_KYSE-520_SHP099_60min_R1 2 KGVEPSPSPIKPGDIKR 17 3 Q92890;Q92890-1;Q92890-3 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 KGVEPS(0.158)PS(0.842)PIKPGDIKR;KGVEPS(0.044)PS(0.956)PIKPGDIKR 126.61 8.1125e-05 1324040000.0 1448910.0 1448460.0 1381060.0 1019980.0 1213550.0 1157050.0 871880.0 869880.0 1525040.0 1071780.0 True False 1368536.0739695237 1378873.8074172153 1470085.3373741307 1116918.5925318312 1309049.4808450239 1149828.4217640958 960018.1391287989 866862.5893115181 1248131.1791298853 1062284.8630322218 1.2882948082900552 1.2980264102430221 1.3838899418917348 1.051430394427029 1.2322960878011844 1.0824106242858311 0.9037294727032923 0.8160359047545084 1.1749496039764489 1.0 20.018739261432277 -5.9518522978242085 0.977216664040709 0.9620432396580575 1.3145451880748886 0.5752421710129664 0.11379621566405473 0.38029818928267284 0.7865654181734727 0.058103798913487915 0.07326368417485649 1.1172431540274353e-06 5.9518522978242085 0.35250194841683113 KGVNLPGAAVDLPAVSEK ddPTM_KYSE-520_SHP099_60min_R1 2 KGVNLPGAAVDLPAVSEK 18 1 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BR70;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 212.83 8.786000000000001e-18 1481670000.0 4204900.0 4235700.0 3415400.0 2950600.0 3931500.0 4464500.0 3070600.0 3882200.0 3803100.0 3594000.0 False True 3971645.814739663 4032210.6140846787 3635562.1488332176 3231024.136869762 4240886.682824945 4436635.399477806 3381006.214168106 3868733.554312291 3112552.9083492043 3562159.956089689 1.1149543714200532 1.1319566397324228 1.0206060911492882 0.907040721556079 1.190537969968176 1.2454902233947012 0.9491449726697726 1.0860639617540193 0.873782465334871 1.0 21.764320870344292 -7.367668698530655 1.7992491076471377 0.9545881503280181 1.08869989108172 0.20676801764229358 0.10355581420962684 0.6494894220183665 3.793433272749685 0.08728075251812774 0.03166048250545412 4.288755632875036e-08 7.367668698530655 0.1341117407537019 KGWDAEGS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 3 KGWDAEGSPFR 11 1 Q8IVD9 Q8IVD9 NUDCD3 NudC domain-containing protein 3 1 KGWDAEGS(1)PFR;KGWDAEGS(1)PFR;KGWDAEGS(1)PFR 119.54 0.00015226 1403280000.0 2186240.0 1975490.0 1833740.0 1774510.0 1822730.0 1755050.0 1541040.0 1920490.0 2457110.0 1711890.0 True False 2064964.909038608 1880584.4951290581 1951945.8144877374 1943158.8968741158 1966168.481084955 1744096.0819472573 1696823.362301053 1913828.2684357378 2010960.7627025102 1696723.9864302657 1.217030539765683 1.1083620613424674 1.150420357169838 1.14524160229639 1.1588027851374771 1.0279197417469519 1.0000585692614603 1.1279549789722945 1.1852020592538253 1.0 20.694320463730225 -6.243044151905414 23.969557024743548 1.071963724771855 1.1524220141947006 0.356796446894063 0.05870158906302446 637.9883352631998 831318.4380135529 0.02022608803137614 0.020179503849324373 5.714205410956468e-07 6.243044151905414 0.08045828942284561 KHCFDPVPPAGNS(ph)SPTEAPK ddPTM_KYSE-520_SHP099_60min_R1 2 KHCFDPVPPAGNSSPTEAPK 20 1 P52746 P52746 ZNF142 Zinc finger protein 142 1 KHCFDPVPPAGNS(0.467)S(0.467)PT(0.066)EAPK;KHCFDPVPPAGNS(0.452)S(0.452)PT(0.095)EAPK 112.13 6.2011e-05 1153380000.0 484650.0 480860.0 414380.0 462410.0 448720.0 502800.0 408770.0 488090.0 571720.0 453420.0 True False 457765.49837417755 457758.76381442475 441091.5978314424 506357.30737136374 484031.71113244497 499661.83869580954 450092.4608107521 486396.92971106205 467910.05988835596 449403.051555422 1.0186078995009322 1.0185929139334566 0.9815055690093493 1.1267331310252973 1.0770547940366009 1.1118345479997023 1.0015340555720393 1.0823178169965715 1.0411813143432818 1.0 18.77765039523618 -5.238316005917364 24.995323739731468 1.0664461820007751 1.007471205897295 0.29087719373097143 0.04030880896264998 988.0356893313848 1068020.9480053734 0.010689331757072129 0.018499055033657688 5.776755600795017e-06 5.238316005917364 -0.058974976103480126 KHDEINHVQK ddPTM_KYSE-520_SHP099_60min_R1 2 KHDEINHVQK 10 1 Q9H7Z6;Q9H7Z6-2 Q9H7Z6 KAT8 Histone acetyltransferase KAT8 0 ; 172.8 3.9031e-05 1924270000.0 2747220.0 2787380.0 2177300.0 2206310.0 3093900.0 2974000.0 2222410.0 3113900.0 2719350.0 1816890.0 False True 2594826.230152705 2653470.080857322 2317652.241803174 2415997.039048709 3337372.3281170214 2955438.1628507143 2447072.8914314276 3103098.607689726 2225584.589234942 1800793.7681190316 1.4409347011807232 1.4735002574053382 1.287017027065799 1.3416289426480361 1.8532784748599944 1.6411863563575824 1.3588856951606672 1.7231837774133238 1.2358908769212444 1.0 20.780201538603755 -7.9894300763840675 6.437796244534505 1.0002343810010657 1.5096640618585426 0.49278644563908736 0.1696317614491893 0.10614762667111399 19.943155275597864 0.171298569504726 0.04441088045894059 1.0246367387461332e-08 7.9894300763840675 0.509429680857477 KHEAFESDLAAHQDR ddPTM_KYSE-520_SHP099_60min_R1 26 KHEAFESDLAAHQDR 15 1 P12814-3;P12814;P12814-2;P12814-4;H9KV75;A0A494C1A0;P35609;P35609-2;H7C5W8;F6THM6;A0A494C060;O43707;O43707-2 P12814-3;O43707 ACTN1;ACTN2;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-4 0 ;;;;;;;;;;;;;;;;;;;;;;;;; 226.7 1.3022e-14 144056790000.0 41633910.0 31582280.0 24914005.0 37555435.0 33612530.0 27386356.0 27065845.0 26198976.0 33462750.0 21993167.0 False True 39324394.01715805 30065019.862831272 26520001.62611745 41124692.250946775 36257644.88186537 27215427.59375104 29801924.749791823 26108097.86714294 27386758.127280984 21798324.650805 1.8040099249419068 1.3792353469568583 1.2166073334052339 1.886598759755056 1.6633225471539343 1.248510058902439 1.367165836237385 1.1977112133789045 1.2563698617209835 1.0 24.377713922569008 -7.147562945795317 0.7684010751128878 1.060400178301662 1.5662986261963765 0.4615590142674437 0.20081397237223164 0.6673759508919583 0.7373080764169834 0.19151841053142635 0.093018590732138 7.119296068321488e-08 7.147562945795317 0.5058984478947144 KHEAFETDFTVHK ddPTM_KYSE-520_SHP099_60min_R1 2 KHEAFETDFTVHK 13 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 211.06 3.8556e-11 999630000.0 851930.0 821760.0 610180.0 672620.0 826900.0 736230.0 686250.0 826920.0 758910.0 563680.0 False True 804671.744619649 782281.4161130931 649513.1791225189 736545.6025694235 891972.3255825876 731634.9154793473 755622.8471545824 824051.6075245779 621111.074564249 558686.2337364036 1.4402927726322052 1.400216022652502 1.162572370503349 1.318352875179195 1.5965532560507536 1.309563170343917 1.3524994917112927 1.4749810497628577 1.1117350617543555 1.0 19.09167874655459 -7.909650862495313 4.7758409182132615 1.0034821393450564 1.3760293119742693 0.5968595097697038 0.10868698450832676 0.13431311499579823 4.863268071900399 0.10815502076265378 0.028288904094175015 1.2312582046821066e-08 7.909650862495313 0.3725471726292129 KHEDFDK ddPTM_KYSE-520_SHP099_60min_R1 8 KHEDFDK 7 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ;;;;;;; 130.27 0.0041167 54822770000.0 51666810.0 58028010.0 23755540.0 24004550.0 56124220.0 62417600.0 38831470.0 50718270.0 40745830.0 40554000.0 False True 48800749.05406771 55240257.297781244 25286860.118607912 26285935.214768846 60540876.8108704 62028028.6057669 42756933.94622627 50542340.159103215 33347414.390787065 40194723.11053457 1.2141083524786764 1.3743161545328175 0.629108951666855 0.6539648287284657 1.5061896718229497 1.5431883542322518 1.0637449554919356 1.2574372018962026 0.8296465757229484 1.0 25.26050277651209 -5.766438465002721 24.999901424016667 1.223249481671182 0.9727085858564951 0.12872645342763334 0.2920635580646226 271.7070431586932 1358777.8479211095 0.09646844431155965 0.11279426883789644 1.7122277643276597e-06 5.766438465002721 -0.25054089581468697 KHEDFEK ddPTM_KYSE-520_SHP099_60min_R1 6 KHEDFEK 7 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ;;;;; 162.5 0.0018567 19856270000.0 50577700.0 50660300.0 29774500.0 28678200.0 52332700.0 52951700.0 36964700.0 49044900.0 42833200.0 34977100.0 False True 47772054.156854734 48226503.145339474 31693811.910884395 31403767.50558476 56450985.75766831 52621208.79886418 40701452.61670677 48874774.68906566 35055770.61710267 34667230.10577206 1.3780176267644968 1.3911265191420588 0.9142297153301383 0.9058631857742815 1.6283673539948975 1.5178948141606154 1.1740612818654357 1.4098263558970652 1.0112077172057052 1.0 25.047069234749806 -7.780733095897338 23.394593716883954 1.005602758469677 1.282990080281193 0.20457127999638947 0.22392277534015684 236.4136349290553 286645.81117979356 0.23076658629500843 0.060072071159589825 1.6567878617883887e-08 7.780733095897338 0.27738732181151615 KHEEDLHILHHR ddPTM_KYSE-520_SHP099_60min_R1 4 KHEEDLHILHHR 12 1 A0A5K1VW81;J3KNF5;O15078 A0A5K1VW81 CEP290 Centrosomal protein of 290 kDa 0 ;;; 214.88 1.0898e-10 1299750000.0 1683748.0 1751652.0 2192760.0 2389780.0 1483867.0 1799094.0 1931033.0 1948599.0 2340270.0 1237726.0 False True 1590347.1419715774 1667500.0086367452 2334108.8181400476 2616903.9726864416 1600638.8908516858 1787865.187005967 2126240.660705945 1941839.764875425 1915335.9614057976 1226760.710576257 1.2963792598350576 1.3592707968724038 1.9026602319564232 2.1331820868775466 1.3047686293277225 1.4573870613822784 1.7332154856077575 1.58290019246155 1.561295487288707 1.0 20.226422436636405 KHEEEEAKAER ddPTM_KYSE-520_SHP099_60min_R1 9 KHEEEEAKAER 11 2 P25789;H0YN18;P25789-2 P25789 PSMA4 Proteasome subunit alpha type-4 0 ;;;;;;;; 251.3 1.4774000000000002e-14 9444718000.0 5875269.0 7548698.0 5781734.0 3704348.0 5907578.0 6249195.0 3888662.0 5185993.0 7460909.0 3756817.0 False True 5549356.116511621 7186047.217253306 6154433.824741477 4056408.120167167 6372470.779079123 6210191.455983812 4281765.904643838 5168004.000702863 6106195.999810346 3723534.5241393964 1.49034635788538 1.9298994465249881 1.6528472570464279 1.089397209524922 1.7114037046700845 1.6678216398219499 1.1499197541705253 1.3879296585540106 1.6398924087380777 1.0 21.82824130342166 -11.884403911155449 0.10401514097883519 1.120480612610541e-14 1.9008161593926658 0.31298157351708256 0.2411607224842263 127.77452328814782 1.4656688988493207 34.439467618171214 4.383941293056896 1.3049566619400533e-12 11.884403911155449 1.9008161593926547 KHEGFER ddPTM_KYSE-520_SHP099_60min_R1 4 KHEGFER 7 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ;;; 99.44200000000001 0.013044 4181260000.0 3319990.0 3429220.0 2481500.0 2572090.0 4178170.0 4081350.0 3169020.0 3884090.0 3544140.0 2831090.0 False True 3135823.5364640164 3264475.1238358365 2641461.460540382 2816540.6602729443 4506968.208464626 4055876.7807500833 3489375.468254737 3870616.9983434197 2900613.516498844 2806008.7451546914 1.1175387610173477 1.1633873662984149 0.9413589551713112 1.0037533436545552 1.60618466219932 1.4454255667426612 1.2435369185074912 1.3794030417856156 1.0337150664649613 1.0 21.420088074565538 -5.693057430926677 24.999996116349465 1.3096729044270439 1.055917505699398 0.2755039683250853 0.17855741170226558 63.69138725425923 23284.05936807231 0.05288111779997973 0.06826921384426522 2.027414597306937e-06 5.693057430926677 -0.25375539872764596 KHEGLER ddPTM_KYSE-520_SHP099_60min_R1 2 KHEGLER 7 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 79.906 0.037375 836540000.0 528420.0 553360.0 280820.0 326030.0 628090.0 625840.0 447640.0 507370.0 424930.0 385020.0 False True 499107.4892208458 526775.754989706 298922.10652788664 357015.7931755066 677517.1096567515 621933.9004164386 492891.8197453952 505610.05189104844 347773.4236135856 381609.02234102774 1.307902748627402 1.380406971926751 0.7833203331884346 0.9355538582011218 1.7754221467313298 1.629767285377867 1.2916146917116618 1.3249426043161168 0.9113343848112566 1.0 18.541735755666984 -7.759214801622267 24.951383399373928 0.9556670841613387 1.3027625993287533 0.2062198468547244 0.273057463450221 96.4524432789966 1081938.4899991006 0.22887359648721442 0.07696976597192041 1.740945590442936e-08 7.759214801622267 0.34709551516741455 KHEQWVNEDR ddPTM_KYSE-520_SHP099_60min_R1 2 KHEQWVNEDR 10 1 O43683-2;O43683-3;O43683;A0A590UK50 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 0 ; 144.65 0.00041198 636390000.0 344970.0 370020.0 271300.0 281960.0 376140.0 399200.0 303680.0 332260.0 352930.0 263220.0 False True 325833.82641935436 352243.6837886567 288788.432095348 308757.3936256345 405740.0780561547 396708.44472427823 334378.9380311894 331107.46761006693 288846.8086412887 260888.07558206102 1.2489410475829317 1.350171651206267 1.1069437782889815 1.1834860329923989 1.555226612603577 1.5206078079237302 1.2816949846602406 1.269155237821204 1.1071675391711546 1.0 17.99307147880001 -7.834337577925931 2.021411791149073 1.0014477911246287 1.324382338382925 0.4122760728667946 0.129210174972642 0.33553999775830284 2.7859884039730223 0.13634356873057937 0.038978594946214515 1.4644091104606603e-08 7.834337577925931 0.3229345472582963 KHEWEAHNK ddPTM_KYSE-520_SHP099_60min_R1 2 KHEWEAHNK 9 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ; 145.89 0.00035153 3769400000.0 2137390.0 2291130.0 2267460.0 2475100.0 2743400.0 2555960.0 2260630.0 2741760.0 2787150.0 935640.0 False True 2018824.7159186685 2181060.675743759 2413624.0996642723 2710332.7598340493 2959289.972189227 2540007.305554776 2489156.5420226823 2732249.4744915953 2281073.8183338563 927350.9575169042 2.1769802463183074 2.351925835698511 2.6027083706551037 2.92266130515603 3.1911219244471245 2.7389924871118447 2.6841580545597363 2.9462949839481785 2.4597740476180787 1.0 19.822755906974137 -8.091727738071546 8.332758959979577 1.0000007131410507 2.7108855586103844 0.7726649054714512 0.27532196002022846 2.01628377819913 183.3127757131621 0.2939625211141013 0.07600578582231386 8.096032854859851e-09 8.091727738071546 1.7108848454693337 KHEWEAHNKK ddPTM_KYSE-520_SHP099_60min_R1 2 KHEWEAHNKK 10 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ; 176.8 1.2027e-05 22174600000.0 12653800.0 12432800.0 8317100.0 8538100.0 6661200.0 11152300.0 8179700.0 10835900.0 11921600.0 5706400.0 False True 11951868.489275068 11835509.62598673 8853233.573830511 9349558.456926635 7185398.5429565 11082694.35896436 9006583.902178995 10798312.792018067 9756937.959079666 5655845.735512022 2.113188557147425 2.092615353999797 1.5653244426810786 1.6530787603032497 1.2704375046583565 1.9595114289235553 1.5924380408094054 1.9092304311302966 1.7251068037124202 1.0 22.431311340170407 -11.065980862128201 1.8458338833286303 2.6774810460483743e-05 1.755454163923011 0.4601589123699702 0.24825478669295836 1056574.6825869486 275387.8975772101 4448749.85866368 0.07060552384308566 8.590513761260704e-12 11.065980862128201 1.7554273891125505 KHGALART(ph)PS(ph)FKK ddPTM_KYSE-520_SHP099_60min_R1 1 KHGALARTPSFKK 13 3 H7BY79;Q8IXH8-1 H7BY79 CDH26 2 KHGALART(1)PS(1)FKK 49.559 0.043125 893840000.0 1320100.0 1178600.0 949910.0 977450.0 1050100.0 1314600.0 1012000.0 1316300.0 1405300.0 789950.0 True False 1246871.421445892 1121978.2868853335 1011142.7185097387 1070346.5541189413 1132736.895748307 1306395.0937738912 1114302.8361682154 1311734.0625267292 1150132.9447301235 782951.6575717992 1.5925267024951024 1.4330109350109452 1.2914497449889026 1.3670659532651759 1.4467520245902683 1.668551412006035 1.4232077107085377 1.6753704393383175 1.4689705725856421 1.0 19.578563707196427 -8.068294989747823 22.145550613301292 1.000000000020019 1.48338070786681 0.6007636866629253 0.11871279438216083 9164.983844836392 2971861.808089795 0.12180780297294476 0.0314506394418125 8.54486115433713e-09 8.068294989747823 0.4833807078467909 KHGGPKDEER ddPTM_KYSE-520_SHP099_60min_R1 10 KHGGPKDEER 10 2 H7BYH4;P00441 H7BYH4 SOD1 Superoxide dismutase [Cu-Zn] 0 ;;;;;;;;; 201.75 1.2164e-05 104852910000.0 5639303.0 7824673.0 2375647.0 1659436.2 8676145.0 10113411.0 3420596.0 4466126.0 3236395.0 5361946.0 False True 5326479.620918174 7448763.964006378 2528785.0067895926 1817148.5175203138 9358908.250987714 10050289.450569665 3766383.2254798952 4450634.051307646 2648747.250878707 5314443.32997086 1.0022648262856497 1.4016075629217823 0.47583252840960455 0.3419264078464221 1.761032655707899 1.8911274100696398 0.7087070068541962 0.8374600640123957 0.4984053994782612 1.0 22.341487151550872 KHGLAHDEMK ddPTM_KYSE-520_SHP099_60min_R1 2 KHGLAHDEMK 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ; 113.03 0.024437 626670000.0 756010.0 837390.0 692060.0 592950.0 847960.0 924190.0 665380.0 843610.0 704780.0 604170.0 False True 714072.6182314283 797160.5274519848 736671.2949351516 649303.7897230816 914689.62776758 918421.7873991252 732643.1038830113 840683.7138100535 576809.718057992 598817.5238371476 1.1924711448919205 1.3312244477146895 1.2302099815226752 1.084309933955213 1.5274930865522496 1.533725635672773 1.2234830724196681 1.403906332638794 0.9632478928837415 1.0 19.191756915577674 -7.768636669634946 24.99850840062121 0.9816236904585746 1.3170305730341878 0.49051065148922146 0.13624918394998875 158.72932867772664 551294.3217782256 0.12823139436113212 0.03586030419070746 1.7035831284760195e-08 7.768636669634946 0.33540688257561324 KHGLAHDEMKS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 22 KHGLAHDEMKSPR 13 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR;KHGLAHDEMKS(1)PR 214.5 1.8864000000000002e-11 100585780000.0 72528980.0 77152570.0 89775790.0 94580520.0 76871590.0 80659750.0 81946980.0 81647000.0 90819310.0 48459430.0 True False 68505652.89646296 73446044.72883146 95562881.06974266 103569424.1841297 82920946.79348318 80156322.58103488 90230980.46385382 81363785.613553 74328812.67249551 48030117.15106606 1.4263061795372372 1.5291664706506192 1.9896449714910094 2.156343359696155 1.7264364884365622 1.6688762663002534 1.8786333620643916 1.6940159724708705 1.5475459374524083 1.0 25.517435991692878 -8.213548135459124 1.5580118751158587 1.000732084943252 1.7778219301071048 0.5683550801630575 0.20018686781449038 0.6167235630772627 2.746863444229526 0.20933998755352168 0.06062042415403838 6.1157801434295904e-09 8.213548135459124 0.7770898451638528 KHHDAEHHR ddPTM_KYSE-520_SHP099_60min_R1 3 KHHDAEHHR 9 1 Q04724;Q5T3G2;Q5T3G3 Q04724 TLE1 Transducin-like enhancer protein 1 0 ;; 128.17 0.0012369999999999998 73585000.0 19867.0 27086.4 46073.8 58296.0 24173.6 27793.9 59591.0 28511.4 37357.9 531.64 False True 18764.93790611738 25785.128686484728 49043.790868686505 63836.434312668454 26075.92479103064 27620.427960476278 65615.03983211477 28412.5006080108 30574.647076021847 526.9300832096609 35.611817400546805 48.93463005456276 93.07456991248003 121.1478265272406 49.48649853543332 52.41763345951601 124.5232373760811 53.92081703694589 58.02410613906145 1.0 9.04146773740879 -8.216274085566239 1.7101158229574163 1.3420781798104064 74.50997663755658 0.34774445065854087 29.406664549674918 0.9335526293851031 4.86418592682932 29.238364899595656 8.318162885213148 6.077513251153343e-09 8.216274085566239 73.16789845774618 KHHEEEIVHHK ddPTM_KYSE-520_SHP099_60min_R1 12 KHHEEEIVHHK 11 1 Q9UII2 Q9UII2 ATPIF1 ATPase inhibitor, mitochondrial 0 ;;;;;;;;;;; 172.13 1.3537000000000001e-05 90264976600.0 12524423.5 15113650.8 19696676.0 34242291.0 14359455.6 14912765.4 27483423.0 18943724.1 22265833.0 3364635.1 False True 11829668.761635724 14387568.329515653 20966355.250755865 37496668.04131979 15489463.061593808 14819689.299529148 30261715.609200325 18878012.74259553 18222919.00317312 3334827.0506605003 3.54731102450807 4.314337178794934 6.287089234988436 11.243961822215981 4.644757532036315 4.443915403826996 9.074448284568955 5.660867102195458 5.464427008160397 1.0 21.66918051225596 -8.32214594374912 2.0885674932810407 1.0024938357069337 6.2505831120003705 0.3200220277039598 2.238405106094104 2.103867004473949 11.908507097367007 2.2392912483683727 0.6169478677034158 4.7627091007049325e-09 8.32214594374912 5.248089276293436 KHHEEEIVHHKK ddPTM_KYSE-520_SHP099_60min_R1 7 KHHEEEIVHHKK 12 2 Q9UII2 Q9UII2 ATPIF1 ATPase inhibitor, mitochondrial 0 ;;;;;; 192.15 3.6454e-08 3447344000.0 1264513.4 2070265.5 3740372.0 5549682.0 1780851.0 1490485.5 3405397.0 2338936.8 3767580.0 149978.94 False True 1194368.3209570316 1970806.8378481297 3981482.363926799 6077122.108707263 1920993.8420438706 1481182.8271269775 3749647.762231952 2330823.574152752 3083482.4449628717 148650.24327344986 8.034755239249282 13.258012865964355 26.784230393775104 40.88201926133468 12.922910852625398 9.964213946170707 25.224632531103765 15.67991765654282 20.743204834792266 1.0 17.181562298725844 -9.518523484759982 0.7821126566870612 2.517821381968209e-08 19.765583283665592 0.25592560231581873 9.306320621734786 29.30400562847413 12.35877752548701 122.05864889288868 3.401251515107566 3.0302364313281457e-10 9.518523484759982 19.76558325848738 KHIKEEPLS(ph)EEEPCTSTAIAS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 2 KHIKEEPLSEEEPCTSTAIASPEK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 2 KHIKEEPLS(1)EEEPCTSTAIAS(1)PEK;KHIKEEPLS(0.998)EEEPCT(0.001)STAIAS(1)PEK 170.6 1.1415e-10 2641600000.0 887940.0 943370.0 909540.0 846380.0 754390.0 832470.0 751350.0 726970.0 1122620.0 780300.0 True False 838684.198135493 898049.0891727613 968170.4037154532 926819.7007265731 813756.201108053 827274.2459409321 827303.790469357 724448.3107460731 918780.5069472219 773387.1490642136 1.0844299638936175 1.1611895675527926 1.251857371675912 1.1983903557849527 1.052197727997789 1.069676742032656 1.069714943505826 0.9367214229285349 1.18799556995346 1.0 19.560831266611135 -5.767155138436453 24.940990288376174 1.0512515949436283 1.1786177714157577 0.4127714070896312 0.07074896511636942 127.78756082172795 557606.9153164134 0.021414203087903948 0.02494216540149395 1.7094045734489028e-06 5.767155138436453 0.12736617647212944 KHIKEEPLS(ph)EEEPCTSTAIASPEK ddPTM_KYSE-520_SHP099_60min_R1 2 KHIKEEPLSEEEPCTSTAIASPEK 24 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 1 KHIKEEPLS(0.999)EEEPCT(0.001)STAIASPEK;KHIKEEPLS(0.996)EEEPCT(0.003)S(0.001)T(0.001)AIASPEK 142.22 7.250499999999999e-07 2860300000.0 1213660.0 1245810.0 1271030.0 1215610.0 1063350.0 1098440.0 1082410.0 1114570.0 1497630.0 1077910.0 True False 1146335.8604287717 1185959.4176010673 1352962.6275199037 1331141.2089135277 1147029.5953661196 1091584.2285143703 1191830.566103594 1110703.8168125933 1225698.144180016 1068360.5560012914 1.0729859446695877 1.1100741326878731 1.2663914068335076 1.2459662624533647 1.0736352899991688 1.021737673094186 1.115569607478239 1.0396338675866004 1.1472701208359983 1.0 20.026967186920693 -5.844043018121189 9.574434725357968 1.0681735637454102 1.1757984978404004 0.3857828248816143 0.06645221309751674 0.3678624506516477 39.356164558515985 0.021659442978810596 0.024585808942227907 1.4320460439565669e-06 5.844043018121189 0.10762493409499019 KHLEINPDHPIVETLR ddPTM_KYSE-520_SHP099_60min_R1 6 KHLEINPDHPIVETLR 16 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;;;;; 250.52 1.7295000000000004e-23 4825340000.0 3400700.0 2971290.0 2640100.0 2054460.0 3251860.0 2868530.0 2154870.0 2436030.0 2761370.0 2117080.0 False True 3212056.3918726174 2828544.768402783 2810285.0703093526 2249715.2607040787 3507762.881447567 2850626.440242827 2372705.28910455 2427579.9805036746 2259974.8164729415 2098324.318263315 1.5307721327516646 1.3480017096422146 1.3392996715756953 1.072148495408023 1.6716971971000072 1.3585251886143879 1.1307619458312943 1.156913618821741 1.077037899624314 1.0 21.000806248282935 -6.772106423567631 4.594574028092433 1.0996075227893187 1.3831501411466696 0.49065229009497024 0.14791036764597032 0.1883604326155951 9.813842345529665 0.06293301776317742 0.044108802155815294 1.6900267409924812e-07 6.772106423567631 0.28354261835735084 KHLEINPDHSIIETLR ddPTM_KYSE-520_SHP099_60min_R1 3 KHLEINPDHSIIETLR 16 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;; 264.52 2.4569e-29 6307180000.0 3482890.0 3833150.0 3059940.0 2592860.0 3835790.0 3088290.0 2658090.0 2628420.0 3251060.0 2271880.0 False True 3289687.1487309183 3648999.7203245535 3257188.628477103 2839284.6348282127 4137644.850340348 3069014.8365669944 2926795.677658469 2619302.624497843 2660749.456553277 2251752.910695892 1.4609449967200259 1.6205151564328832 1.4465124539221699 1.260921933903817 1.8375217061722957 1.362944762717563 1.2997854532600377 1.163228261882589 1.18163473617138 1.0 21.102617095644934 -6.968207709947995 1.5999633316281945 1.1092460182030626 1.5136439991576045 0.588198593312666 0.14732107024061683 0.2940362141479829 1.4770750529720096 0.09552088183240862 0.04789681299753848 1.0759504958919912e-07 6.968207709947995 0.40439798095454194 KHNGVGGS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 5 KHNGVGGSPPK 11 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 KHNGVGGS(1)PPK;KHNGVGGS(1)PPK;KHNGVGGS(1)PPK;KHNGVGGS(1)PPK;KHNGVGGS(1)PPK 106.3 0.00049146 11285500000.0 3645440.0 3548480.0 3341620.0 3227690.0 3447880.0 3711980.0 3342060.0 3609620.0 3917730.0 3389610.0 True False 3443220.176195522 3378005.694422928 3557026.171981041 3534448.687159612 3719208.5402463307 3688812.1559309317 3679908.0401623975 3597099.070711644 3206368.9899363457 3359580.6924766763 1.02489581033316 1.005484315940829 1.0587708698131635 1.052050541626974 1.1070454561710608 1.0979977841257167 1.0953474189213703 1.0706988163037303 0.9543955878531427 1.0 21.679849751544396 -4.775002392418199 18.01620832792911 1.0618596286031756 1.0151902761335736 0.09200263036703948 0.04496285638688269 14.414275636243717 19152.058369756047 0.011994508641608354 0.025468442607614494 1.6787947700423054e-05 4.775002392418199 -0.04666935246960202 KHPCDHCDRR ddPTM_KYSE-520_SHP099_60min_R1 1 KHPCDHCDRR 10 2 Q9UPG8 Q9UPG8 PLAGL2 Zinc finger protein PLAGL2 0 122.51 0.00068271 460840000.0 51732.0 61586.0 24723.0 19209.0 34931.0 107160.0 41099.0 69687.0 90527.0 36355.0 False True 48862.32283481469 58627.316117529364 26316.684138198612 21034.61758460356 37679.87096979729 106491.17469101623 45253.688007586454 69445.27206206812 74089.57879996016 36032.92298376199 1.3560466037360939 1.6270485784333786 0.730351077820083 0.5837610674571884 1.0457067550911006 2.955385405147559 1.2558983357519937 1.927272791423643 2.0561634379022804 1.0 15.137028067204614 KHPDASVNFSEFSK ddPTM_KYSE-520_SHP099_60min_R1 2 KHPDASVNFSEFSK 14 1 P09429;Q5T7C4 P09429 HMGB1 High mobility group protein B1 0 ; 212.7 2.2570999999999998e-13 2399300000.0 2655970.0 2849090.0 1902270.0 2322590.0 2718550.0 2350250.0 1946360.0 2427200.0 2160790.0 2023840.0 False True 2508638.049555066 2712215.4398287213 2024893.3679396156 2543328.255287856 2932484.418566382 2335581.2179690287 2143117.063443049 2418780.609712739 1768445.0050831912 2005910.352123695 1.2506232129960961 1.3521119909258397 1.009463541476728 1.2679172090593114 1.461921972465871 1.1643497504742946 1.0684012180175901 1.2058268741431692 0.8816171685892669 1.0 20.93582569998183 -7.273784239671171 1.1291882801719288 0.967421551526166 1.254394979976978 0.42194667479796244 0.12808325292493683 0.5311066199396276 1.1944764384005457 0.11440494569415975 0.044455187911614645 5.3237267979513464e-08 7.273784239671171 0.286973428450812 KHPS(ph)SPAR ddPTM_KYSE-520_SHP099_60min_R1 6 KHPSSPAR 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KHPS(0.5)S(0.5)PAR;KHPS(0.5)S(0.5)PAR;KHPS(0.5)S(0.5)PAR;KHPS(0.647)S(0.353)PAR;KHPS(0.5)S(0.5)PAR;KHPS(0.5)S(0.5)PAR 87.29799999999999 0.0041245 338317000.0 409169.0 773140.0 560538.0 359729.0 492336.0 734706.0 520393.0 346721.0 482365.0 3113010.0 True False 386471.57991182065 735997.1938932006 596671.1763725103 393917.53600353235 531080.0421913513 730120.4273286478 572999.4029862508 345518.3057762901 394779.6754321112 3085431.1532851285 0.12525691247407533 0.23853949653343187 0.19338340307390134 0.12767017523114052 0.17212506641929065 0.23663481408466108 0.18571129107067105 0.11198380019220616 0.12794959790685342 1.0 21.55704067271639 -10.703941193194224 2.9781982513433154 1.1087929925486002 0.1712885793684566 0.970488359524641 0.04348162435776933 63920374.341842785 61719744.046783194 52273628.389646225 0.011336044211166508 1.9772373550980062e-11 10.703941193194224 -0.9375044131801435 KHPSS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 1 KHPSSPAR 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KHPS(0.146)S(0.854)PAR 91.54899999999999 0.0035095 0.0 56769.0 115510.0 86153.0 52720.0 74992.0 121810.0 91804.0 54687.0 67033.0 632170.0 True False 53619.91040380415 109960.72621595518 91706.56022967391 57730.49294915405 80893.44375388735 121049.73860687469 101084.44424069834 54497.30356104177 54861.49696441642 626569.4656208178 0.08557696049020909 0.17549646487641052 0.14636295775889618 0.09213741830198109 0.1291053078587806 0.19319444251394557 0.16132998779399793 0.0869772731536554 0.08755852299642232 1.0 19.257114939532332 -10.610387699112787 3.063739556266114 1.055623647193134 0.13111240699407384 0.9793447198338067 0.03796210215410795 26112769.771886073 28712587.91706305 11679862.395940227 0.00992642550728412 2.4525185498301205e-11 10.610387699112787 -0.9245112401990601 KHQQLLEEK ddPTM_KYSE-520_SHP099_60min_R1 1 KHQQLLEEK 9 1 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 0 92.866 0.0074165 474100000.0 1755200.0 1694700.0 813870.0 789640.0 2314600.0 2604400.0 1132700.0 1513000.0 1234400.0 2209400.0 False True 1657835.557095547 1613284.0682034385 866333.3624380422 864687.1481860765 2496745.8517274847 2588144.9735468696 1247204.3700866955 1507751.756136855 1010264.076691715 2189826.434887188 0.7570625373243121 0.7367177793186833 0.39561736429703503 0.39486560871232795 1.14015696036481 1.1818950270733222 0.5695448507776129 0.6885256895780094 0.46134436072042406 1.0 21.062385096022474 -5.740978532805772 24.99990922884559 0.828218466799379 0.5703661421980734 0.22476368138977532 0.24429300162544262 440.25999942363677 537925.4762517947 0.07912048700664254 0.10202075641781905 1.8156054060055283e-06 5.740978532805772 -0.2578523246013057 KHS(ph)DPHLLER ddPTM_KYSE-520_SHP099_60min_R1 8 KHSDPHLLER 10 1 Q9Y6M7-7;Q9Y6M7-13;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7;Q9Y6M7-9;Q9Y6M7-2;Q9Y6M7-3;Q9Y6M7-11;C9JRP1;Q9Y6M7-4 Q9Y6M7-7 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 KHS(1)DPHLLER;KHS(1)DPHLLER;KHS(1)DPHLLER;KHS(1)DPHLLER;KHS(1)DPHLLER;KHS(1)DPHLLER;KHS(1)DPHLLER;KHS(1)DPHLLER 88.075 0.0023929000000000003 22744210000.0 27708000.0 29798780.0 26045940.0 38803830.0 33927380.0 35043470.0 32543900.0 42931350.0 50064900.0 21577270.0 True False 26170982.005471397 28367201.87991934 27724902.967377488 42491734.3364031 36597271.785613984 34824750.70501482 35833755.00985651 42782431.16710241 40974376.19342431 21386112.174662028 1.2237372455419184 1.326430986999517 1.296397528496347 1.9868844785517736 1.71126343520137 1.628381559986144 1.6755619121979473 2.0004772638287407 1.9159338480404207 1.0 24.350170900050866 -5.236915431240216 22.646997817168515 1.740466278326179 1.2866124109226993 0.33079002335768704 0.27030904102446635 246.88439027599608 227986.92106805625 0.06958476282898558 0.1204057576002443 5.795415376890896e-06 5.236915431240216 -0.45385386740347977 KHS(ph)EEAEFT(ph)PPLKCSPK ddPTM_KYSE-520_SHP099_60min_R1 1 KHSEEAEFTPPLKCSPK 17 2 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 2 KHS(1)EEAEFT(0.577)PPLKCS(0.423)PK 151.94 1.713e-05 1134400000.0 520130.0 477510.0 471210.0 433850.0 533490.0 546740.0 509030.0 580880.0 792550.0 592010.0 True False 491277.3520465515 454569.7028428771 501584.95056265674 475082.973558241 575472.6278571225 543327.592857094 560487.7200540584 578865.062858411 648642.8985596388 586765.2519768099 0.8372638808986046 0.7747045369701656 0.8548306991131784 0.8096644645498148 0.9807544429707746 0.9259709756612639 0.9552162780017688 0.9865360310758293 1.1054555401403938 1.0 19.16242391210614 -6.121292829692619 0.6433650869771647 1.037048027884225 0.7925176113711624 0.764089070234421 0.0472091727338652 0.375092739354732 0.34326343988812497 0.0349819479910732 0.04341632339173497 7.563227608755072e-07 6.121292829692619 -0.2445304165130625 KHS(ph)EEAEFTPPLK ddPTM_KYSE-520_SHP099_60min_R1 4 KHSEEAEFTPPLK 13 1 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 KHS(1)EEAEFTPPLK;KHS(1)EEAEFTPPLK;KHS(1)EEAEFTPPLK;KHS(1)EEAEFTPPLK 172.23 3.6158000000000004e-07 8609860000.0 4841440.0 4560480.0 4462700.0 5242950.0 5123830.0 5679800.0 6055400.0 6968100.0 7593900.0 6510000.0 True False 4572875.672028631 4341387.695379965 4750372.7825724585 5741238.391649609 5527046.270395249 5644350.261385169 6667538.927008901 6943929.287466766 6215039.186640643 6452326.464703354 0.7087173435882353 0.6728406752400059 0.7362263531702525 0.8897935377350072 0.8565974304973973 0.8747775383440193 1.0333542426104505 1.076190010758548 0.9632245393408467 1.0 22.621388004887347 -5.687212950394397 0.6489586438205219 1.0304686883577328 0.65282988166467 0.8614261074329989 0.04951344547574192 0.3269056705202681 0.28538055681499025 0.03413584976670962 0.07094146796499966 2.0548827650912175e-06 5.687212950394397 -0.3776388066930627 KHS(ph)EEAEFTPPLKCS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KHSEEAEFTPPLKCSPK 17 2 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 2 KHS(1)EEAEFT(0.069)PPLKCS(0.931)PK;KHS(1)EEAEFT(0.065)PPLKCS(0.935)PK 112.8 8.7181e-05 18514600000.0 2125610.0 1822910.0 1834480.0 2019060.0 1941300.0 2185270.0 2161600.0 2377770.0 3006500.0 2385160.0 True False 2007698.1760015169 1735334.6673563079 1952733.5160717801 2210950.855347473 2094069.2655139428 2171630.919345253 2380115.623183017 2369522.07084569 2460595.3876973717 2364029.338026403 0.8492695685738116 0.7340580082669543 0.8260191549492398 0.9352467923233446 0.8858051090271853 0.918614200092046 1.006804604705136 1.0023234622053687 1.040848075832928 1.0 21.172816509053902 -5.873893723779363 0.6167113240134657 1.0263428503140501 0.773764395386829 0.8015823211711292 0.041098936147912435 0.3850421858977867 0.3156088200168763 0.030360052281947218 0.05132893530245737 1.3369226349135437e-06 5.873893723779363 -0.2525784549272212 KHS(ph)GS(ph)RS(ph)DEDRYQNGAER ddPTM_KYSE-520_SHP099_60min_R1 1 KHSGSRSDEDRYQNGAER 18 3 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 3 KHS(1)GS(1)RS(1)DEDRYQNGAER 102.21 0.00032447 198720000.0 125970.0 129450.0 103270.0 137470.0 104450.0 124240.0 117910.0 148800.0 151330.0 80307.0 True False 118982.19298503065 123231.02769158855 109926.94943784214 150535.1074681374 112669.62076079476 123464.57207551197 129829.49349070563 148283.8475301809 123852.28671885692 79595.54245790066 1.4948348778194733 1.5482151875121322 1.3810691659772811 1.8912504748335346 1.4155267654641275 1.5511493264941856 1.631115128832428 1.862966730939871 1.556020386246684 1.0 16.28040001818332 -8.047470785483139 23.436586116849828 0.9999999985849447 1.5989279905514495 0.5564375534594979 0.15905764526470495 4914.394456725912 2426258.879391227 0.15328624838810437 0.039578339210375575 8.964564875734144e-09 8.047470785483139 0.5989279919665048 KHS(ph)LEVTQEEVQR ddPTM_KYSE-520_SHP099_60min_R1 2 KHSLEVTQEEVQR 13 1 O15021;O15021-2;O15021-3;O15021-6;H7C1I9 O15021 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 KHS(1)LEVTQEEVQR;KHS(1)LEVTQEEVQR 160.64 7.2122e-07 2311800000.0 1012760.0 949600.0 859420.0 768960.0 732650.0 733430.0 662550.0 874800.0 986460.0 864330.0 True False 956580.1839129922 903979.7906213418 914819.5883206178 842041.7272037457 790305.3867917322 728852.3913179557 729527.0198648728 871765.5229798548 807343.7306329459 856672.7086385654 1.1166226894670206 1.0552218852144333 1.0678752563210052 0.982921153799715 0.9225289644719685 0.850794456235517 0.8515819548217498 1.0176179469581506 0.942417941521665 1.0 19.708384603149202 -5.387671568513698 2.1946403091690794 0.9238306069908305 1.083273821713576 0.6168479616525724 0.05243736218566479 0.218636466072762 2.061769709768159 0.01734966916714315 0.029610741020533075 4.095702766602941e-06 5.387671568513698 0.15944321472274547 KHS(ph)PDLR ddPTM_KYSE-520_SHP099_60min_R1 4 KHSPDLR 7 1 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 KHS(1)PDLR;KHS(1)PDLR;KHS(1)PDLR;KHS(1)PDLR 113.93 0.0018406 5021460000.0 9331000.0 8666600.0 8442300.0 8514200.0 8731200.0 8359900.0 8454700.0 9468100.0 10720200.0 8664000.0 True False 8813390.829112655 8250243.527168186 8986504.166157594 9323387.008112418 9418295.766267613 8307722.763152541 9309383.585920358 9435257.370971158 8773681.914250247 8587243.700489998 1.0263352405626678 0.9607557226654018 1.0464946005485805 1.0857252144341047 1.0967775103122082 0.9674492832523773 1.0840944906907852 1.098752719738555 1.0217110658859736 1.0 23.033763704442677 -4.88082023272406 7.110674872029843 1.0554252087790377 0.9940457183476167 0.20338544741070796 0.044090723942737574 0.29316355910083464 16.88834850196489 0.011413391225644722 0.024075577915281754 1.3157693551726476e-05 4.88082023272406 -0.06137949043142099 KHS(ph)PS(ph)PPPPTPTESR ddPTM_KYSE-520_SHP099_60min_R1 16 KHSPSPPPPTPTESR 15 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 2 KHS(1)PS(1)PPPPTPTESR;KHS(0.996)PS(0.999)PPPPT(0.003)PT(0.001)ESR;KHS(1)PS(1)PPPPTPTESR;KHS(0.999)PS(0.992)PPPPT(0.006)PT(0.002)ESR;KHS(0.999)PS(0.999)PPPPT(0.002)PTESR;KHS(0.999)PS(0.995)PPPPT(0.006)PTESR;KHS(1)PS(1)PPPPTPTESR;KHS(0.995)PS(0.997)PPPPT(0.006)PT(0.002)ES(0.001)R;KHS(0.897)PS(0.823)PPPPT(0.232)PT(0.029)ES(0.019)R;KHS(1)PS(0.993)PPPPT(0.006)PT(0.001)ESR;KHS(1)PS(1)PPPPTPTESR;KHS(0.94)PS(0.774)PPPPT(0.23)PT(0.033)ES(0.024)R;KHS(1)PS(0.999)PPPPT(0.001)PTESR;KHS(1)PS(1)PPPPTPTESR;KHS(1)PS(0.996)PPPPT(0.004)PT(0.001)ESR;KHS(0.995)PS(0.99)PPPPT(0.012)PT(0.002)ESR 102.98 0.00047599 99465630000.0 21499980.0 19657410.0 19080540.0 18472020.0 19329030.0 18429390.0 18424930.0 20491810.0 23098520.0 18088970.0 True False 20307333.25025246 18713038.51722605 20310502.138343398 20227595.226984687 20850114.693863373 18314365.34097487 20287501.73438818 20420728.693934415 18904411.03430418 17928715.79880573 1.132670821387284 1.0437467316243905 1.1328475706941779 1.1282233180544974 1.16294523979527 1.0215101598182972 1.1315646899673415 1.1389956159210626 1.0544208099703072 1.0 24.095768818505608 -7.9960191954640765 4.792057794999338 1.000159941754995 1.1096693173323817 0.41912373399538394 0.04212079420165101 0.14816254423691794 10.774907141790106 0.04006373301629733 0.010458306549964944 1.0092082789029921e-08 7.9960191954640765 0.10950937557738682 KHS(ph)PSPPPPTPTESR ddPTM_KYSE-520_SHP099_60min_R1 6 KHSPSPPPPTPTESR 15 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 KHS(0.835)PS(0.165)PPPPTPTESR;KHS(0.999)PS(0.001)PPPPTPTESR;KHS(0.884)PS(0.116)PPPPTPTESR;KHS(0.972)PS(0.028)PPPPTPTESR;KHS(0.976)PS(0.024)PPPPTPTESR;KHS(0.983)PS(0.017)PPPPTPTESR 136.49 9.193e-06 5872790000.0 1551180.0 1706100.0 1519140.0 1836120.0 1469090.0 1443530.0 1450070.0 1360320.0 1781980.0 1424040.0 True False 1465132.953199334 1624136.3950916915 1617066.1951099413 2010624.2927503902 1584699.0250213135 1434520.3938197335 1596657.22691941 1355601.3674210734 1458417.3520601925 1411424.1134863545 1.0380529418477296 1.150707558113002 1.145698291292212 1.4245358808444566 1.1227660133331243 1.0163638130542696 1.1312384503446749 0.9604493464920381 1.0332949098182544 1.0 20.428720132373183 -6.00309773808274 24.999210678501022 1.0363809379446334 1.1950432222694654 0.3711706496983451 0.09910133074772129 148.46464598715494 1198148.041501107 0.032298254693946336 0.035931362272497054 9.928925725512321e-07 6.00309773808274 0.15866228432483198 KHSDNEAESIADALSSTSNILASEFFEEEKQES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KHSDNEAESIADALSSTSNILASEFFEEEKQESPK 35 2 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 PHF3 PHD finger protein 3 1 KHSDNEAESIADALSSTSNILAS(0.018)EFFEEEKQES(0.982)PK;KHSDNEAESIADALSSTSNILAS(0.001)EFFEEEKQES(0.999)PK 143.39 7.590500000000001e-07 144059000.0 127224.0 179011.0 168250.0 234270.0 153896.0 118900.0 120012.0 147187.0 218483.0 109949.0 True False 120166.6311052436 170411.042859011 179095.66420951815 256534.95036415636 166006.73965153954 118157.90099628452 132143.98416424877 146676.44265070403 178811.99470822708 108974.93739902753 1.1026997030081886 1.5637636224100433 1.6434573717967225 2.3540729316945277 1.5233478780876175 1.0842667480838482 1.212608947692114 1.3459649177280733 1.6408543007781784 1.0 16.733636849368562 -6.0064308264643405 24.99578175916695 1.278737364825025 1.6922888741350006 0.26053974480715136 0.3255781490754352 435.30713019520397 1691990.3098433414 0.10780472915356917 0.11805937427519879 9.853015671221635e-07 6.0064308264643405 0.41355150930997553 KHSEEAEFTPPLKCS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 KHSEEAEFTPPLKCSPK 17 2 Q3B726 Q3B726 TWISTNB DNA-directed RNA polymerase I subunit RPA43 1 KHSEEAEFT(0.003)PPLKCS(0.997)PK;KHSEEAEFTPPLKCS(1)PK;KHSEEAEFT(0.003)PPLKCS(0.997)PK;KHSEEAEFT(0.213)PPLKCS(0.787)PK 172.91 1.3438000000000001e-08 5829930000.0 3193030.0 3061250.0 3095200.0 3109490.0 2733220.0 2682100.0 2513890.0 2559090.0 3054090.0 2237510.0 True False 3015906.260752504 2914182.954970071 3294721.544495098 3405014.994697739 2948308.8641055003 2665360.0190255214 2768018.534402089 2550213.1140860966 2499544.243343644 2217687.402156441 1.3599329904746218 1.3140638992386258 1.485656428084214 1.5353899703748874 1.3294519602891803 1.2018646164620728 1.2481554125755125 1.1499425534934786 1.127094937236479 1.0 21.08062459165799 -6.9410545470026195 0.7224222438878505 1.0380460958504139 1.4215596592064847 0.7782601615861302 0.07341895650432369 0.3614132522986561 0.36258484015553455 0.07287930811325523 0.04135231812399456 1.1453690750686894e-07 6.9410545470026195 0.3835135633560709 KHSPS(ph)PPPPTPTESR ddPTM_KYSE-520_SHP099_60min_R1 1 KHSPSPPPPTPTESR 15 1 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 KHS(0.324)PS(0.676)PPPPTPTESR 83.42299999999999 0.0031314 373370000.0 329640.0 335810.0 294890.0 395190.0 309890.0 312510.0 303870.0 322750.0 377460.0 300180.0 True False 311354.2120789517 319677.1835389133 313899.08124068263 432748.7387817943 334276.57996709173 310559.5091703011 334588.14508541086 321630.4555804159 308922.7789922666 297520.63873650646 1.0464961805715156 1.0744706145311465 1.0550497692319134 1.454516703848065 1.1235408117792376 1.0438250955939303 1.1245880168391698 1.0810357793876002 1.0383238631920868 1.0 18.182630224773487 -6.0059684039704315 24.9990185297883 1.0686837619438285 1.1624485720718476 0.14688007832161465 0.11294174095904785 616.2397627320262 2581174.239542768 0.03769597583482051 0.04146209248633076 9.863512425857495e-07 6.0059684039704315 0.09376481012801907 KHT(ph)GEKPFECPNCHER ddPTM_KYSE-520_SHP099_60min_R1 1 KHTGEKPFECPNCHER 16 2 P52739-2;P52739 P52739-2 ZNF131 Zinc finger protein 131 1 KHT(1)GEKPFECPNCHER 84.762 0.0054297 333700000.0 142670.0 123620.0 167440.0 156350.0 144990.0 130720.0 122650.0 173710.0 162630.0 98284.0 True False 134755.81069440593 117681.10964259706 178233.45031347222 171209.45699165858 156399.8881197478 129904.12799187811 135048.6589486478 173107.4405542188 133100.49156867573 97413.28022379483 1.3833412691249212 1.2080602292853646 1.8296627513620642 1.7575576615254742 1.6055294284356159 1.333536122522921 1.386347514819236 1.7770414891740232 1.366348523146885 1.0 16.571830845973796 -6.249075377637245 24.087188578211542 1.4220756187880428 1.5637630390471415 0.10998667346682767 0.24196070182240187 1461.519999382562 2847290.586745627 0.08369443912218384 0.0830487539673999 5.635398374336823e-07 6.249075377637245 0.14168742025909875 KHT(ph)KELER ddPTM_KYSE-520_SHP099_60min_R1 1 KHTKELER 8 2 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 KHT(1)KELER 67.456 0.020497 130590000.0 124580.0 94016.0 79875.0 83385.0 131920.0 111800.0 90730.0 111690.0 120550.0 84787.0 True False 117669.29905592707 89499.33023910689 85023.87030451871 91309.88532938567 142301.353477875 111102.21472989563 99901.87383946865 111302.57345864204 98661.1588182001 84035.85314328776 1.4002273393392177 1.0650136446702512 1.0117570908638995 1.0865586760176649 1.6933409747770392 1.3220811186441765 1.1888006142940926 1.3244653239714526 1.174036499040178 1.0 16.358717351683893 -3.7566073553485704 7.2173295520641 1.2260497078545725 11.347726200068985 0.07322970586881716 0.1959034041436067 23393.42252960808 10813.143887498063 0.05144699684826786 3806944.259790974 0.00017514294363998547 3.7566073553485704 10.121676492214412 KHYASEEIK ddPTM_KYSE-520_SHP099_60min_R1 1 KHYASEEIK 9 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 79.97399999999999 0.022385 45937000.0 47786.0 54809.0 37166.0 47670.0 61580.0 56549.0 40719.0 51210.0 58452.0 39160.0 False True 45135.215320970696 52175.893370013786 39561.77982770252 52200.54246749188 66425.99565772855 56196.05671521351 44835.27389914382 51032.36446250388 47838.59025500979 38813.07286601896 1.1628869344299404 1.3442865899879326 1.0192900717824651 1.3449216620308801 1.7114335648462617 1.4478641489994841 1.1551590891531116 1.3148241222400858 1.2325380786042506 1.0 15.24425503666332 -8.340252015778814 1.0951155099170569 1.0003697219724796 1.3238368815371373 0.22172839233989738 0.17673699832115433 1.9754763412518475 4.063856825190424 0.1846603525445968 0.05811497444987986 4.568230238697785e-09 8.340252015778814 0.32346715956465766 KIADDKYNDTFWK ddPTM_KYSE-520_SHP099_60min_R1 2 KIADDKYNDTFWK 13 2 P14625 P14625 HSP90B1 Endoplasmin 0 ; 112.5 9.829200000000001e-05 2450340000.0 2040610.0 2204530.0 1723490.0 1197330.0 1942600.0 1655080.0 1317250.0 1458190.0 2122030.0 1461870.0 False True 1927413.2954448168 2098621.0697330064 1834588.9230815014 1311123.883209609 2095471.568117954 1644750.0317992475 1450410.4851211284 1453131.8792341028 1736722.8440231036 1448918.9691176484 1.3302422954808564 1.4484047172154897 1.2661777243476322 0.9048980040671613 1.446231026565991 1.1351566698038709 1.0010293991833017 1.0029076229977305 1.198633519913622 1.0 20.466545483666245 -2.9626013411372836 0.2763592784933903 1.0184035847739887 2.1430408973791244 0.3484523677714032 0.1502125543786885 20.17447433497821 0.7222550252024829 0.1823467687986779 8.749348180439519 0.0010899301312274695 2.9626013411372836 1.1246373126051357 KIAELEEEQSQGST(ph)TNSDWMK ddPTM_KYSE-520_SHP099_60min_R1 1 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQSQGS(0.062)T(0.313)T(0.313)NS(0.313)DWMK 82.586 0.0085962 709030000.0 196550.0 254780.0 216190.0 159620.0 203110.0 174620.0 154270.0 192240.0 282780.0 212690.0 True False 185646.97968728893 242539.98636742312 230125.95331623018 174790.23680849708 219093.6014621836 173530.13180799998 169865.11713010934 191573.16430915328 231434.28030369646 210805.73207031598 0.8806543250226463 1.1505379098824595 1.0916494113142512 0.829153150115455 1.0393151994040803 0.8231755849509708 0.8057898400668225 0.9087663908742883 1.0978557273124796 1.0 17.685554570619658 -5.246776779607128 24.49659203200302 0.9203839424304037 1.0519062910537318 0.1701207710176601 0.11119975460232712 963.891926037472 1610356.2222395216 0.030148155542545477 0.05191425068132208 5.6653040175137935e-06 5.246776779607128 0.13152234862332812 KIAELEEEQSQGSTTNS(ph)DWMK ddPTM_KYSE-520_SHP099_60min_R1 2 KIAELEEEQSQGSTTNSDWMK 21 1 P46821;D6RA40;D6RA32 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KIAELEEEQSQGSTT(0.04)NS(0.96)DWMK;KIAELEEEQSQGSTTNS(1)DWMK 227.99 9.1606e-20 1656730000.0 785030.0 739570.0 692670.0 611610.0 723560.0 566280.0 564920.0 625930.0 902640.0 639280.0 True False 741482.8209814929 704039.9470827986 737320.6165111858 669737.2305127487 780500.0555067561 562745.6364690994 622027.6266878932 623758.7949231605 738743.3297026958 633616.4765523146 1.170239172150493 1.1111452639515909 1.1636702071309044 1.0570072832653867 1.2318178020774906 0.8881486787262173 0.9817099928848447 0.9844421949334516 1.165915592540153 1.0 19.273250326159964 -6.255779699989829 24.999919741997875 1.001675097828814 1.1407478824126347 0.4659312941407786 0.07624912554988661 441.3676259190361 1949608.6626344512 0.02523628860436295 0.024587288509464716 5.549071234985695e-07 6.255779699989829 0.13907278458382066 KICTLPS(ph)PPS(ph)PLASLAPVADSSTR ddPTM_KYSE-520_SHP099_60min_R1 2 KICTLPSPPSPLASLAPVADSSTR 24 1 Q9UER7-3;Q9UER7;Q9UER7-2 Q9UER7-3 DAXX Death domain-associated protein 6 2 KICT(0.002)LPS(0.998)PPS(0.999)PLAS(0.001)LAPVADSSTR;KICT(0.008)LPS(0.992)PPS(0.999)PLAS(0.002)LAPVADSSTR 100.1 0.0014798 476320000.0 1281300.0 1357480.0 1338670.0 1070610.0 1206120.0 1199390.0 1013530.0 1108830.0 1550280.0 1161760.0 True False 1210223.7347917738 1292264.623180978 1424962.8101477302 1172360.4525093671 1301034.7821159395 1191904.16211887 1115987.5034995761 1104983.727532868 1268788.2313785092 1151467.7102356027 1.0510270709581158 1.122276040998637 1.2375186880891063 1.0181444447708303 1.1298925454450945 1.0351173129075357 0.9691869720525929 0.9596306676344198 1.1018878081426196 1.0 20.13504252458335 -6.390953149818373 3.916807089758125 1.0039122365844837 1.1141347293183532 0.37175757176176905 0.06455935399472701 0.2557711010880793 6.814480410100799 0.023935056798186055 0.020760358618669764 4.064871772261764e-07 6.390953149818373 0.11022249273386953 KICTLPSPPS(ph)PLASLAPVADSSTR ddPTM_KYSE-520_SHP099_60min_R1 2 KICTLPSPPSPLASLAPVADSSTR 24 1 Q9UER7-3;Q9UER7;Q9UER7-2 Q9UER7-3 DAXX Death domain-associated protein 6 1 KICTLPSPPS(1)PLASLAPVADSSTR;KICTLPSPPS(1)PLASLAPVADSSTR 189.39 2.8297e-15 2057260000.0 805260.0 961080.0 678700.0 562410.0 579290.0 811880.0 559130.0 750490.0 917440.0 776780.0 True False 760590.6225539872 914908.2741895097 722450.0879583949 615861.2773052672 624876.8272907701 806812.755768405 615652.3169829388 747886.7253556823 750856.0227803354 769898.3335256958 0.9879104674391428 1.1883494668701917 0.9383707646826367 0.799925458319897 0.8116355109241374 1.047947138778262 0.7996540454420804 0.971409720983272 0.9752664606271356 1.0 19.55430842231949 -4.897755110555562 7.18014338950133 0.9073209533644093 1.0864770615747132 0.3405898418121548 0.09463059889831486 0.21852469826770343 13.448184414222311 0.024310101651903882 0.05121512238571667 1.2654497065702188e-05 4.897755110555562 0.17915610821030392 KIDAGTMAEPSAS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 2 KIDAGTMAEPSASPSK 16 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 KIDAGTMAEPS(0.001)AS(0.999)PSK;KIDAGTMAEPSAS(1)PSK 175.85 1.4005e-08 2539600000.0 3366500.0 2994600.0 2777100.0 2404100.0 2676000.0 3035900.0 2482100.0 2607200.0 3037500.0 2789300.0 True False 3179753.5340486267 2850734.921013759 2956116.309517108 2632584.9411809808 2886585.9756427715 3016951.821990078 2733014.8909615884 2598156.231725056 2485966.569143782 2764588.9720425634 1.1501722556967762 1.0311604907067065 1.0692787750408475 0.9522518420653129 1.044128441816822 1.0912840398697898 0.9885791047420525 0.9397983779865324 0.8992174222944517 1.0 21.398633571637607 -6.990674467751024 4.219569314081535 0.9422956697621423 1.0504549534729364 0.4746749238584955 0.05228703155874604 0.18873059014646168 7.99719488020845 0.02451263170009771 0.01508003797261621 1.0217050318087602e-07 6.990674467751024 0.10815928371079409 KIDKYTEVLK ddPTM_KYSE-520_SHP099_60min_R1 1 KIDKYTEVLK 10 2 M0QYS1;P40429;Q8J015 M0QYS1 RPL13A;RPL13a 60S ribosomal protein L13a 0 84.169 0.0036228000000000002 423730000.0 1427100.0 1249000.0 1270400.0 758100.0 898920.0 1000800.0 832140.0 988220.0 1176500.0 1086500.0 False True 1347935.9181466815 1188996.1652127786 1352292.0167118704 830149.5960689245 969659.8898448427 994553.6359720893 916260.8321037743 984792.0954722827 962877.257151491 1076874.4552842102 1.251711294229681 1.1041177171381387 1.2557564255296332 0.7708880009135608 0.900439122765642 0.9235557878560741 0.8508520446442882 0.9144910909901518 0.8941406794697968 1.0 20.038418636015635 -5.254859537673071 24.998275648600714 0.8896849247127456 1.1938874177912067 0.81801597648955 0.06702104870481601 200.21534976622547 760660.3589747221 0.017244643742953217 0.028989059241434564 5.560840804947216e-06 5.254859537673071 0.30420249307846103 KIDS(ph)PPIR ddPTM_KYSE-520_SHP099_60min_R1 3 KIDSPPIR 8 1 G5EA48;Q7Z6B7-2;Q7Z6B7 G5EA48 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 KIDS(1)PPIR;KIDS(1)PPIR;KIDS(1)PPIR 96.103 0.0028506 987110000.0 939170.0 742210.0 707610.0 808560.0 785280.0 802850.0 791150.0 783680.0 849530.0 811350.0 True False 887072.3679110216 706553.1175200767 753223.6728160311 885405.2992975723 847077.0683679952 797839.1153479131 871127.1628799245 780961.5969922862 695276.7669085489 804162.0702207478 1.103101477625666 0.8786202976796993 0.9366565530867008 1.1010284270862498 1.053366105834197 0.9921372132472015 1.0832731300554803 0.971149505693432 0.8645978126246253 1.0 19.61712676482164 -7.522234877523366 24.990902650889954 0.9274904694447315 1.01645646072831 0.1882638151883107 0.07460425112115363 41.214861842540905 1600101.5173375355 0.049800146440554874 0.019334061481742756 3.004450979504674e-08 7.522234877523366 0.08896599128357852 KIDS(ph)PPIRR ddPTM_KYSE-520_SHP099_60min_R1 2 KIDSPPIRR 9 2 G5EA48;Q7Z6B7-2;Q7Z6B7 G5EA48 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 KIDS(1)PPIRR;KIDS(1)PPIRR 90.434 0.0025440000000000003 1403280000.0 2440900.0 2131200.0 2042600.0 1928800.0 2018740.0 1886710.0 1692560.0 1747200.0 2335200.0 1674610.0 True False 2305498.411186484 2028813.9530035842 2174269.264275554 2112112.572085136 2177603.3529406157 1874934.3430504608 1863660.4825937506 1741139.3709995463 1911186.545601498 1659774.2582268647 1.3890433592152742 1.222343305390797 1.309978904359153 1.2725300212460844 1.3119876646761273 1.129632137477208 1.1228397315817498 1.0490217946021188 1.1514737839368692 1.0 20.662555606870562 -6.369669936389402 2.9428641486721085 1.086721753634787 1.2969637678481365 0.7878731776845029 0.054887201120347257 0.12234856122936165 2.042722385844776 0.019786366910399422 0.017165807824194846 4.2690384227094393e-07 6.369669936389402 0.21024201421334943 KIDVYLPLHS(ph)SQDR ddPTM_KYSE-520_SHP099_60min_R1 1 KIDVYLPLHSSQDR 14 1 Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7;H0Y866;Q9BPZ7-5;Q9BPZ7-6 Q9BPZ7-3 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 KIDVYLPLHS(0.591)S(0.409)QDR 80.609 0.0051754 0.0 54348.0 46296.0 47916.0 47825.0 51764.0 53440.0 50143.0 53604.0 50505.0 46727.0 True False 51333.20809994799 44071.87066828726 51004.74202831072 52370.273620889435 55837.53230312867 53106.46113743854 55211.94378852059 53418.060235267665 41334.56512744251 46313.03513305592 1.1083965443523462 0.9516083439936539 1.1013042414900183 1.1307890633907118 1.205654782561954 1.1466849664433634 1.192146954521516 1.1534130743493538 0.8925039140425494 1.0 15.499130686967288 -7.756778162690325 24.999991787575503 0.9462519295922089 1.123272753349527 0.5071078520909091 0.06999560105922085 95.04881245819129 509806.36849348596 0.056175456125723305 0.01965624483304146 1.7507407373776813e-08 7.756778162690325 0.1770208237573181 KIDYFER ddPTM_KYSE-520_SHP099_60min_R1 2 KIDYFER 7 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 110.87 0.0072602000000000005 2600900000.0 7504600.0 6303200.0 4500100.0 4202300.0 6940400.0 6539900.0 5169600.0 5369400.0 5532500.0 5339300.0 False True 7088304.8779507885 6000384.810703915 4790183.646414574 4601685.32853244 7486569.994525814 6499082.058247272 5692193.618433991 5350774.8046273785 4527937.462975455 5291997.955912548 1.3394383249961945 1.1338600015897422 0.9051748859922903 0.8695553866174781 1.414696312601813 1.2280961013951441 1.0756227923471362 1.0111067406307594 0.8556196545610081 1.0 22.335381073685397 -7.320111924601113 2.6470945743550414 0.9316365731684254 1.135573782917156 0.22013676327088294 0.16293491644981709 0.5106530295116406 6.895416339891395 0.1187188707701698 0.04950930971826661 4.7850675762232384e-08 7.320111924601113 0.20393720974873053 KIEDLGAAMEEALILDNK ddPTM_KYSE-520_SHP099_60min_R1 1 KIEDLGAAMEEALILDNK 18 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 152.18 6.2732e-06 141740000.0 470520.0 217530.0 169150.0 234010.0 418700.0 227310.0 195160.0 248780.0 245420.0 195120.0 False True 444419.31764163374 207079.53228081303 180053.679649569 256250.24004232776 451649.3079228804 225891.27397363647 214888.67737805206 247917.04024568832 200857.91453473782 193391.38860106296 2.29803054239609 1.0707794890908335 0.931032560198388 1.325034386980555 2.335415817581021 1.1680523916171668 1.1111594933595246 1.2819445686752033 1.0386083681785705 1.0 17.56116402985581 -6.482246281826832 24.989702280898747 1.1325913919271318 1.5355596307733939 0.22221043928873274 0.43544290461661334 984.8242237842704 605685.3546131774 0.1600084097186611 0.1410959491829955 3.2942284848773105e-07 6.482246281826832 0.4029682388462621 KIEEAMDGSET(ph)PQLFTVLPEK ddPTM_KYSE-520_SHP099_60min_R1 2 KIEEAMDGSETPQLFTVLPEK 21 1 Q13435;E9PPJ0 Q13435 SF3B2 Splicing factor 3B subunit 2 1 KIEEAMDGS(0.012)ET(0.988)PQLFTVLPEK;KIEEAMDGS(0.013)ET(0.987)PQLFTVLPEK 140.57 3.0254000000000003e-06 1061610000.0 970170.0 1078660.0 832410.0 832130.0 757020.0 946160.0 863380.0 1192200.0 1087810.0 1306330.0 True False 916352.7361140525 1026839.5544983323 886068.4805030898 911215.3850109917 816593.1671453998 940254.6644797681 950658.8761767917 1188064.5364615705 890291.1254585334 1294756.9325093613 0.7077411312547092 0.793075154661053 0.6843512154716217 0.7037733200199748 0.6306922532268393 0.7262016837843577 0.7342373323572982 0.9175965825176076 0.6876125573107109 1.0 20.304249852427112 -8.69020100078322 0.4748899818692116 1.0196889819158368 0.7048337602819007 0.57120736821368 0.07139987773014955 1.920312958693655 0.6968147748452777 0.16044830629676296 0.04001610943361598 2.040793203281132e-09 8.69020100078322 -0.3148552216339361 KIEEAMDGSET(ph)PQLFTVLPEKR ddPTM_KYSE-520_SHP099_60min_R1 6 KIEEAMDGSETPQLFTVLPEKR 22 2 Q13435;E9PPJ0 Q13435 SF3B2 Splicing factor 3B subunit 2 1 KIEEAMDGS(0.016)ET(0.982)PQLFT(0.002)VLPEKR;KIEEAMDGS(0.003)ET(0.992)PQLFT(0.005)VLPEKR;KIEEAMDGSET(1)PQLFTVLPEKR;KIEEAMDGS(0.03)ET(0.97)PQLFTVLPEKR;KIEEAMDGSET(1)PQLFTVLPEKR;KIEEAMDGS(0.003)ET(0.997)PQLFTVLPEKR 223.15 8.3588e-20 6788620000.0 6244000.0 5785230.0 6506840.0 5664600.0 5281320.0 5148920.0 4762250.0 5876020.0 7508550.0 6275030.0 True False 5897632.872894597 5507298.866992739 6926281.317712101 6202961.880875903 5696929.837399725 5116783.680385106 5243664.705081108 5855637.458093375 6145186.595142227 6219438.1160994675 0.9482581485340527 0.885497815749094 1.1136506527467358 0.9973508482734293 0.9159878643462676 0.8227083516017211 0.8431090730700417 0.9415058641608849 0.9880613779619359 1.0 22.56835281789017 -5.796239029354801 6.789945708329447 0.9066803419387189 0.988131961253192 0.1541270832491537 0.07460527752809461 0.31850772968230107 43.217996780524736 0.024522155437957296 0.02836351681295561 1.5986778974105474e-06 5.796239029354801 0.08145161931447309 KIEEIKDFLLTAR ddPTM_KYSE-520_SHP099_60min_R1 4 KIEEIKDFLLTAR 13 2 J3KSP2;J3KT73;J3QL01;P63173 J3KSP2 RPL38 60S ribosomal protein L38 0 ;;; 169.37 4.5777e-07 1379241000.0 775681.0 723317.0 600084.0 539492.0 916280.0 679722.0 483178.0 533818.0 560849.0 328729.0 False True 732652.4286482626 688567.7655990489 638766.3748083484 590765.1574758154 988386.0230799533 675479.6028679261 532022.3476028515 531966.3099520574 459012.9594527471 325816.71680729167 2.24866432829964 2.1133592295275347 1.9605082914949223 1.8131824642540695 3.0335644922250764 2.073188906594522 1.632888431312512 1.6327164399814866 1.4088072703901071 1.0 18.313701101124895 -7.388370942454139 1.0566712244699785 1.1021069230222516 2.203934696623526 0.6067757277826462 0.32502980576832974 0.38330492064138716 0.7623352271072441 0.3111633544350575 0.11692743383392452 4.0891124857033923e-08 7.388370942454139 1.1018277736012743 KIEFPLPDEK ddPTM_KYSE-520_SHP099_60min_R1 1 KIEFPLPDEK 10 1 P62191;P62191-2 P62191 PSMC1 26S protease regulatory subunit 4 0 84.71799999999999 0.011625 386600000.0 457040.0 424040.0 293450.0 291530.0 486050.0 478380.0 322580.0 372270.0 396370.0 364550.0 False True 431687.08011334826 403668.48190298345 312366.25653660117 319236.92354830937 524299.3697537994 475394.252973949 355189.5344774136 370978.6822584715 324399.19967457425 361320.3706156079 1.1947488025041364 1.1172037746314274 0.8645132739247443 0.8835287172002013 1.4510650724190066 1.3157139525900108 0.9830321325981461 1.0267306037199289 0.8978159717977474 1.0 18.462919068143407 -6.94038849319399 24.99999003086954 0.9783360017515325 1.1289743764795253 0.1791805879242927 0.16809431768029928 157.9295442344826 66231.88848089207 0.07882512977003125 0.053143885108994426 1.1471270129599583e-07 6.94038849319399 0.1506383747279928 KIEFPLPDRR ddPTM_KYSE-520_SHP099_60min_R1 3 KIEFPLPDRR 10 2 P43686;P43686-2 P43686 PSMC4 26S protease regulatory subunit 6B 0 ;; 96.334 0.0017929000000000003 1934700000.0 3725070.0 3178990.0 2414400.0 2145000.0 3784380.0 2937540.0 2258450.0 2447810.0 2722630.0 2329960.0 False True 3518432.9413570585 3026266.5486387275 2570036.0871765865 2348860.155082235 4082189.175823239 2919205.723234864 2486756.166347928 2439319.1184331467 2228269.023917014 2309318.3670814503 1.5235807204026635 1.3104587880896503 1.1128981277815908 1.0171227096984286 1.7677030737785924 1.2640984304490672 1.0768355726935677 1.0562939927230532 0.9649033479663232 1.0 21.139035648866557 -6.767013126880405 3.7838707136925342 1.0211145829669188 1.330361734610972 0.37993017602387513 0.19520724300495818 0.272349899345161 8.469562244528662 0.08799664184028015 0.06127256244049331 1.7099636293603744e-07 6.767013126880405 0.30924715164405314 KIEIDNGDELTADFLYEEVHPK ddPTM_KYSE-520_SHP099_60min_R1 1 KIEIDNGDELTADFLYEEVHPK 22 1 Q12792-4;Q12792;Q12792-3 Q12792-4 TWF1 Twinfilin-1 0 185.41 3.19e-13 277650000.0 283950.0 190330.0 163160.0 179270.0 276850.0 185210.0 176800.0 172990.0 182460.0 180510.0 False True 268198.7274597086 181186.2611088457 173677.55466523045 196307.76690050922 298636.51993897656 184054.03568983893 194672.6694017199 172389.93806616947 149329.8634422961 178910.82183465504 1.49906374980252 1.0127182875292673 0.9707492978023372 1.0972380814500533 1.6691920414683974 1.0287473602906878 1.0880989053956254 0.9635523234334478 0.8346608769161157 1.0 17.448881129210637 -6.928765009548761 1.9441915946012702 0.926587933375617 1.2127549468918277 0.2724522047366823 0.210513555809035 0.5190036919799108 3.933081923160144 0.12524438334104473 0.06892257170532187 1.178243331466615e-07 6.928765009548761 0.28616701351621077 KIEIDNKVS(ph)DEEDKTSEGQER ddPTM_KYSE-520_SHP099_60min_R1 5 KIEIDNKVSDEEDKTSEGQER 21 3 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 KIEIDNKVS(1)DEEDKTSEGQER;KIEIDNKVS(1)DEEDKTSEGQER;KIEIDNKVS(1)DEEDKTSEGQER;KIEIDNKVS(1)DEEDKTSEGQER;KIEIDNKVS(1)DEEDKTSEGQER 148.02 1.2897e-06 6545180000.0 3430350.0 3389800.0 3503570.0 2870260.0 3222120.0 2803060.0 2973410.0 3382680.0 4386650.0 2922360.0 True False 3240061.647266814 3226948.9198064674 3729415.7281102007 3143048.6474248674 3475682.5126450243 2785565.0627976893 3273991.3004851085 3370946.272603448 3590144.938447588 2896470.1639616783 1.1186242094188137 1.1140970688932537 1.287572637381927 1.085130683040052 1.1999717987397192 0.9617102559716005 1.1303383481109543 1.1638118405448374 1.2394897013325794 1.0 21.465864373458277 KIEQVDKEDEITEK ddPTM_KYSE-520_SHP099_60min_R1 1 KIEQVDKEDEITEK 14 2 Q9Y2X3 Q9Y2X3 NOP58 Nucleolar protein 58 0 141.55 3.655e-06 725470000.0 685630.0 596090.0 452650.0 365030.0 621790.0 651110.0 507380.0 569910.0 505520.0 539320.0 False True 647596.7371304798 567452.9416506684 481828.5432656066 399722.3414497288 670721.3354988481 647046.1809730085 558670.9219516091 567933.115227994 413730.3111221611 534542.0443846107 1.21149822344849 1.0615683978683963 0.9013856783151823 0.7477846609987573 1.2547588025017062 1.2104682648825458 1.0451393446417796 1.0624666875022426 0.7739902136200837 1.0 19.02794390197026 -7.735382828900306 24.842029956984426 0.886995116847699 1.056877233284457 0.17354102558461137 0.15234896520567717 342.96253059733954 326978.37348755414 0.10980033016832684 0.04147019703071421 1.8391500830560916e-08 7.735382828900306 0.16988211643675788 KIESFGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 KIESFGSPK 9 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KIES(0.063)FGS(0.937)PK;KIES(0.125)FGS(0.875)PK;KIES(0.009)FGS(0.991)PK 62.042 0.021665 6077580000.0 8296700.0 7094840.0 6440190.0 6280720.0 7528080.0 7208050.0 6557730.0 7066210.0 9433390.0 7128690.0 True False 7836465.511938592 6753993.236828048 6855334.95206834 6877637.740432674 8120497.067084009 7163061.886259607 7220649.345677261 7041698.966775819 7720524.172409959 7065535.352636905 1.1091113582800163 0.955906792584006 0.970249897555163 0.9734064578511936 1.1493109384915021 1.0138031343352212 1.0219536079431641 0.9966263864418723 1.0927019379400045 1.0 22.752367446420305 KIESFGSK ddPTM_KYSE-520_SHP099_60min_R1 2 KIESFGSK 8 1 P30405 P30405 PPIF Peptidyl-prolyl cis-trans isomerase F, mitochondrial 0 ; 121.5 0.0022736 996990000.0 1834520.0 1849370.0 1215020.0 1268590.0 1820890.0 1830080.0 1451580.0 1684670.0 1703070.0 1587970.0 False True 1732755.518575045 1760523.4892390356 1293342.133300735 1389156.412184509 1964183.6835531236 1818657.7918862908 1598319.87245559 1678826.2729749358 1393835.4189009708 1573901.8212219651 1.1009298643734633 1.1185726234640092 0.8217425736864541 0.8826194832826223 1.2479709071231309 1.1555090459672377 1.0155143420665635 1.066665182248476 0.8855923540509076 1.0 20.58591411877576 -7.747793183470114 24.898936857247975 0.9427961649074181 1.0490167123017842 0.11402328965951547 0.12073790152089509 478.7041352247969 873457.1110182868 0.08954250246578974 0.03343231869587926 1.7873385254504463e-08 7.747793183470114 0.10622054739436604 KIETS(ph)AEK ddPTM_KYSE-520_SHP099_60min_R1 1 KIETSAEK 8 1 Q96N46;Q96N46-2 Q96N46 TTC14 Tetratricopeptide repeat protein 14 1 KIET(0.053)S(0.947)AEK 64.22399999999999 0.019469999999999998 394810000.0 508000.0 482350.0 409630.0 413590.0 481110.0 413480.0 465700.0 403050.0 498180.0 547360.0 True False 479820.22732710635 459177.18197788956 436035.4052311734 452897.469249632 518970.61985855486 410899.3179473812 512777.50079400954 401651.9136225777 407723.0700958182 542510.8162396365 0.8844436146968199 0.8463926768513735 0.803735874343506 0.8348174003033688 0.9566087980618555 0.757402996672936 0.9451931379880669 0.7403574299340071 0.751548278653526 1.0 19.049292375827527 -9.248513638951927 7.469360902971045 0.9999999980978876 0.8366473222923468 0.3167898080038779 0.07241006356312368 31773593.285000917 19670926.2971917 0.06870057305672818 0.017175142930265067 5.642692202780912e-10 9.248513638951927 -0.1633526758055408 KIFPGLS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 4 KIFPGLSPVR 10 1 Q5VZK9-2;Q5VZK9;A0A0U1RR91;Q5VZK9-3 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 KIFPGLS(1)PVR;KIFPGLS(1)PVR;KIFPGLS(1)PVR;KIFPGLS(1)PVR 137.8 0.00017261 772694000.0 1473760.0 1388320.0 1274760.0 1050460.0 1169550.0 1126100.0 996560.0 1074010.0 1349320.0 1110180.0 True False 1392007.5949322758 1321623.0232891955 1356933.0692881164 1150295.4025676849 1261586.9311707783 1119071.592194415 1097302.0102883372 1070284.5099858185 1104317.501589164 1100344.668906969 1.265065060309722 1.2010991288775308 1.2331891157668173 1.0453955338469851 1.1465379592596017 1.0170191430163862 0.9972348131411822 0.9726811427631936 1.0036105347664759 1.0 20.069524069652076 -5.44630159694368 0.6430350961008784 0.9811011227838592 1.2866720002583747 0.8548522489229922 0.04030238690991355 0.3706188994588415 0.2843031590286792 0.023755450669532687 0.06888026909164106 3.5784784241991597e-06 5.44630159694368 0.3055708774745155 KIGDEYFTFITDCKDPK ddPTM_KYSE-520_SHP099_60min_R1 2 KIGDEYFTFITDCKDPK 17 2 B4DUR8;P49368;P49368-2 B4DUR8 CCT3 T-complex protein 1 subunit gamma 0 ; 182.76 5.694400000000001e-10 4637800000.0 3875900.0 3302100.0 2387940.0 2234430.0 3528500.0 3088800.0 2355820.0 2569210.0 2698510.0 2471730.0 False True 3660896.100584904 3143462.1594468523 2541870.433239088 2446789.5553941242 3806172.875581277 3069521.653467819 2593969.276187551 2560298.0101681245 2208528.6079012933 2449832.3951768386 1.4943455347363248 1.2831335587020616 1.0375691162560554 0.9987579396089687 1.5536462343606703 1.2529516955980367 1.058835404942185 1.045091090806362 0.9015019199882337 1.0 21.224251620217956 -6.867430305066769 3.2672301319762034 0.9893601358899831 1.2612769527127217 0.3956815472684222 0.16441659961159236 0.3002618814581292 6.320465998209674 0.08092457406350126 0.05225396643298008 1.356968277080633e-07 6.867430305066769 0.2719168168227386 KIGELEVGQMENIS(ph)PGQIIDEPIRPVNIPR ddPTM_KYSE-520_SHP099_60min_R1 1 KIGELEVGQMENISPGQIIDEPIRPVNIPR 30 2 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;E7ERV5 A0A087WY00 MYO5A Unconventional myosin-Va 1 KIGELEVGQMENIS(1)PGQIIDEPIRPVNIPR 52.155 0.05056 85780000.0 25245.0 27135.0 20443.0 14467.0 29299.0 24758.0 23251.0 19376.0 32785.0 17205.0 True False 23844.609525340158 25831.393869534633 21760.788489956485 15841.93933033785 31604.664611493805 24603.476138486196 25601.43798789247 19308.789178392402 26832.07044259383 17052.577085287456 1.3982994714571735 1.5148088022320876 1.2760996992490454 0.9290055837956531 1.8533658844305434 1.442801050857789 1.5013236920055186 1.132309156664159 1.573490640645975 1.0 14.057702163796607 -10.410789629672411 3.346324621635121 0.9957707564280674 1.3974772299128106 0.20338252481896346 0.2387327361356216 45586098.43662238 64266687.185126394 1853959.4305540847 0.06100184858265247 3.88338429857407e-11 10.410789629672411 0.4017064734847432 KIHSQEEALR ddPTM_KYSE-520_SHP099_60min_R1 2 KIHSQEEALR 10 1 F2Z2Y4;O00764-3;O00764-2;O00764 F2Z2Y4 PDXK Pyridoxal kinase 0 ; 179.57 3.2058000000000004e-05 1933810000.0 562780.0 499900.0 458440.0 371260.0 496980.0 542090.0 375020.0 409140.0 547550.0 394350.0 False True 531561.4715258833 475884.05363480235 487991.77592993435 406544.43877661036 536089.4985706065 538706.6152319247 412930.6814424938 407720.78883399436 448128.7226122392 390856.3657996572 1.3599918487661216 1.217542031485623 1.2485194527446082 1.040137693407799 1.3715767363128788 1.378272589036075 1.0564767970394304 1.0431473669357645 1.146530443978846 1.0 18.57627900928619 -6.7834461796656855 24.998652271976354 1.065134151467574 1.2602680420168988 0.5123839481356041 0.09904880495325799 224.14978806430076 254620.84621703095 0.04312425843787532 0.029100696790803363 1.6464699939608714e-07 6.7834461796656855 0.19513389054932473 KIIPTLEEGLQLPS(ph)PTATSQLPLESDAVECLNYQHYK ddPTM_KYSE-520_SHP099_60min_R1 3 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK 37 1 P61978;P61978-2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 KIIPTLEEGLQLPS(0.707)PT(0.194)AT(0.08)S(0.018)QLPLES(0.001)DAVECLNYQHYK;KIIPTLEEGLQLPS(0.856)PT(0.142)AT(0.001)SQLPLESDAVECLNYQHYK;KIIPTLEEGLQLPS(0.935)PT(0.063)AT(0.002)SQLPLESDAVECLNYQHYK 155.38 1.2236e-07 3848020000.0 814980.0 1322960.0 974530.0 733735.0 769270.0 1102610.0 643216.0 851070.0 1573570.0 852790.0 True False 769771.4347776475 1259403.0157965552 1037349.7631031307 803468.9537945278 829807.1724524332 1095728.2019975868 708238.5504632161 848117.8368112313 1287849.3544716313 845234.944060581 0.9107188956003163 1.4900034891438294 1.2272916192030747 0.9505865315205665 0.9817473570909983 1.2963593255309755 0.8379191554253277 1.003410759068716 1.523658437835867 1.0 19.688992887451246 -5.1233639171794305 9.403397974691554 1.0793335782125715 1.2395186326526029 0.05495022390593585 0.22623559524401157 0.8699709097752256 62.47187770057166 0.05995715769490327 0.10409335564033065 7.527245536483007e-06 5.1233639171794305 0.1601850544400314 KIKDPDASKPEDWDER ddPTM_KYSE-520_SHP099_60min_R1 4 KIKDPDASKPEDWDER 16 3 P27797;K7EJB9 P27797 CALR Calreticulin 0 ;;; 125.52 0.00011602 9114450000.0 7053370.0 7248130.0 5268800.0 4246000.0 6079150.0 6606200.0 4743690.0 5641030.0 6736930.0 4957400.0 False True 6662105.505555501 6899918.955135067 5608435.2783780685 4649538.563393551 6557544.519367986 6564968.255354537 5223228.479152967 5621462.583556299 5513673.336184948 4913481.292798834 1.355882949085293 1.4042831434501528 1.1414382072844675 0.9462819305342394 1.3346025208193386 1.3361134120885148 1.0630402697997643 1.144089546406756 1.1221520969797425 1.0 22.228314132395507 -1.0000000396969146 0.49046228280417137 1.1313410577736305 9.396351327035665 0.29028335712594866 0.1294488703598324 144.7175453142519 1.58178204086808 0.07721436804924393 1226.0375070960488 0.09999999085944802 1.0000000396969146 8.265010269262035 KILDPNTGEPAPVLSSPPPADVSTFLAFPS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 2 KILDPNTGEPAPVLSSPPPADVSTFLAFPSPEK 33 1 P46060 P46060 RANGAP1 Ran GTPase-activating protein 1 1 KILDPNTGEPAPVLSSPPPADVS(0.006)T(0.006)FLAFPS(0.988)PEK;KILDPNTGEPAPVLSSPPPADVS(0.058)T(0.38)FLAFPS(0.562)PEK 110.16 0.00017007 708620000.0 533210.0 671050.0 473700.0 421000.0 422210.0 597500.0 427250.0 500100.0 634980.0 501160.0 True False 503631.778372217 638811.750733415 504235.45994679834 461011.7134217342 455435.52495371184 593770.7808686288 470440.5995581716 498365.2698242179 519683.6385431821 496720.11229657993 1.0139146088602715 1.2860597646829237 1.0151299443372068 0.9281116306932926 0.9168856136064447 1.19538300578033 0.9470939225373716 1.0033120413023575 1.046230312963231 1.0 18.922073637405035 -4.953314664857415 23.642538451964096 1.0044986701356815 1.150140154056902 0.26400040748503695 0.09593637368812705 86.17407311484376 43638.84132637613 0.024386177315886687 0.05076383620929397 1.113487472132597e-05 4.953314664857415 0.14564148392122056 KILDSVGIEADDDRLNK ddPTM_KYSE-520_SHP099_60min_R1 2 KILDSVGIEADDDRLNK 17 2 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 0 ; 125.23 0.00078235 842250000.0 999570.0 823400.0 740390.0 527070.0 905080.0 804840.0 706000.0 783210.0 912340.0 834740.0 False True 944121.859506605 783842.6280514026 788116.7240658859 577162.574330626 976304.6467992364 799816.6950197613 777369.369896007 780493.2273125882 746682.054219798 827344.8530178921 1.141146712961043 0.9474194771287848 0.9525855164156586 0.697608224944314 1.1800455919173076 0.9667271055138413 0.939595341725291 0.9433711039182706 0.9025040181203016 1.0 19.658129271834483 -4.261371675651918 7.8605556877276195 0.945813151634632 1.142869970666357 0.21633470068324367 0.1103677076454582 0.14931427754105747 106.3607621497182 0.027067640036855047 0.15615618179226415 5.4780794209822474e-05 4.261371675651918 0.197056819031725 KILFEDFR ddPTM_KYSE-520_SHP099_60min_R1 2 KILFEDFR 8 1 A0A0A0MTR2;Q8N543;H3BR79;H3BUA6 A0A0A0MTR2 OGFOD1 Prolyl 3-hydroxylase OGFOD1 0 ; 95.775 0.008407099999999999 699490000.0 2441550.0 2191390.0 1639940.0 1296050.0 2410060.0 2225300.0 1625290.0 1612080.0 1772800.0 1918210.0 False True 2306112.3543907446 2086112.3350565487 1745653.1563967722 1419226.2023283588 2599718.0106343813 2211411.077266875 1789590.174501815 1606488.0707423023 1450904.208651223 1901216.1517447964 1.2129669486945838 1.0972515319428926 0.9181771124733714 0.7464833501576859 1.3673973936359374 1.1631560542116186 0.9412870666280952 0.8449791830707863 0.7631453200729911 1.0 20.85849113251675 -6.9657852906998885 5.0960958589480025 0.8590783954044214 1.0744307743962696 0.25839937746125374 0.16579494044033227 0.28141408356244163 18.303557562602013 0.07796666194339207 0.050419227880143934 1.0819687297551862e-07 6.9657852906998885 0.21535237899184811 KILGQEGDASYLASEISTWDGVIVTPSEK ddPTM_KYSE-520_SHP099_60min_R1 1 KILGQEGDASYLASEISTWDGVIVTPSEK 29 1 B4DY09;Q12905 B4DY09 ILF2 Interleukin enhancer-binding factor 2 0 206.95 2.6770999999999997e-16 108330000.0 389570.0 345870.0 268970.0 428360.0 260510.0 225720.0 259960.0 319560.0 281940.0 168710.0 False True 367959.7755114584 329253.88603854564 286308.2365672162 469071.2056088701 281010.65490085876 224311.19775341728 286239.2937651079 318451.52094586485 230746.80312901936 167215.3606543937 2.200514199601375 1.969040910775288 1.712212535061104 2.805192081476068 1.6805313447348953 1.3414509102248755 1.7118002356058477 1.9044393989859048 1.3799378372058448 1.0 17.351347856078263 -5.979906792662161 24.9877613393631 1.5361724776492867 2.1392411579232324 0.47971956517817527 0.3427592302621237 234.1482129310924 291183.55417896033 0.10457986051341708 0.11856943699908302 1.0473533046216416e-06 5.979906792662161 0.6030686802739458 KILIEDWK ddPTM_KYSE-520_SHP099_60min_R1 1 KILIEDWK 8 1 K7ELL7;P14314-2;P14314;K7EPW7 K7ELL7 PRKCSH Glucosidase 2 subunit beta 0 110.14 0.035401 0.0 2694100.0 2511400.0 1553900.0 1775900.0 2513900.0 2383800.0 1682400.0 1810800.0 2031700.0 2023800.0 False True 2544652.902444798 2390748.5743117486 1654066.8803279083 1944681.002056195 2711729.6278656013 2368921.8199742874 1852473.4106417033 1804518.757443899 1662794.4949891067 2005870.7064925767 1.268602654302841 1.191875710918657 0.824612909981708 0.9694946916377393 1.351896520093897 1.1809942746093212 0.9235258307754537 0.8996186801088703 0.8289639454861146 1.0 20.935797185686273 -6.81026455245338 7.464462123458001 0.9030837510877004 1.1226247389896458 0.3513669679543504 0.14476636441996293 0.2939981749972332 37.25328700574089 0.06655469792035641 0.04506760009638358 1.547873437545232e-07 6.81026455245338 0.21954098790194532 KILNDLS(ph)SDAPGVPR ddPTM_KYSE-520_SHP099_60min_R1 1 KILNDLSSDAPGVPR 15 1 C9J4L5;C9JBT4;H7C3I0;E7EWP8;C9J896;P16220-3;P16220;P16220-1 C9J4L5 CREB1 Cyclic AMP-responsive element-binding protein 1 1 KILNDLS(0.75)S(0.25)DAPGVPR 95.5 0.0011267000000000002 300870000.0 262340.0 294770.0 274560.0 261200.0 253980.0 240070.0 247280.0 309160.0 387120.0 219730.0 True False 247787.4772381755 280608.80674120935 292258.5769115321 286024.3694673567 273966.7810514764 238571.63408055532 272277.4756202336 308087.59611848654 316828.7665010504 217783.36314735338 1.1377704598607066 1.2884767811733533 1.3419692518651591 1.313343523278365 1.2579784658119595 1.0954538980056823 1.2502216500165315 1.4146516596404697 1.454788657509538 1.0 17.732534222699346 -7.044319068524884 24.428197420186233 1.327319494580721 1.2438508432285844 0.004452221743878271 0.13451229160596404 1010.6780268058033 557070.7315508174 0.06222520286325939 0.035928823914463295 9.029858221483708e-08 7.044319068524884 -0.08346865135213655 KIMIER ddPTM_KYSE-520_SHP099_60min_R1 2 KIMIER 6 1 H0YGG4;F5H0D0;Q14232-2;Q14232 H0YGG4 EIF2B1 Translation initiation factor eIF-2B subunit alpha 0 ; 94.163 0.034457 12049400000.0 8293400.0 8067000.0 18085700.0 8690600.0 12689600.0 6202300.0 14276500.0 6710100.0 29214700.0 7358500.0 False True 7833348.569516984 7679449.211186135 19251533.160143163 9516552.011075841 13688199.326052506 6163589.145073633 15719707.94521295 6686824.229249112 23910046.92265508 7293309.414826362 1.074045830770979 1.0529443870261146 2.6396155798638223 1.3048331655489498 1.8768159346463695 0.8451018316244538 2.1553600774508213 0.9168436232330492 3.2783535652620226 1.0 22.79814217029069 KINPENSK ddPTM_KYSE-520_SHP099_60min_R1 1 KINPENSK 8 1 Q9Y266 Q9Y266 NUDC Nuclear migration protein nudC 0 136.99 0.0016905000000000002 923780000.0 1663000.0 1546200.0 954050.0 1030500.0 1732500.0 1843400.0 1348300.0 1449300.0 1338800.0 1667500.0 False True 1570750.074891689 1471918.2311064852 1015549.5895339727 1128438.410168877 1868837.8934234309 1831894.6568254908 1484599.3221399246 1444272.716569163 1095707.6684015456 1652727.2472953703 0.9503988498175764 0.8905996034828054 0.6144689580182596 0.6827735260101306 1.1307600189212819 1.1084071251462222 0.8982724309588402 0.8738723942094282 0.6629694465282353 1.0 20.6564172229063 -4.508631745926867 24.39331053828006 0.8704575548180771 0.9354491138645109 0.018558356422956113 0.16910772024581552 2976.2899059440842 5095870.708616178 0.04655815153588534 0.156209456501661 3.100046827429113e-05 4.508631745926867 0.06499155904643383 KINS(ph)APPTETK ddPTM_KYSE-520_SHP099_60min_R1 1 KINSAPPTETK 11 1 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 KINS(1)APPTETK 84.508 0.0024129 0.0 535010.0 485930.0 445700.0 440760.0 477380.0 403090.0 409040.0 467640.0 548110.0 439010.0 True False 505331.92878400616 462585.19340419926 474430.5351452141 482649.6978806737 514947.090079352 400574.1657913564 450389.7550456989 466017.8659879961 448587.04072869057 435120.7129446117 1.1613603162309858 1.0631192210403546 1.0903423372667767 1.1092317224211576 1.1834580031700348 0.9206046825041564 1.0350915082799814 1.071008233173486 1.030948487128888 1.0 18.731056169208195 -6.250800355058391 24.999062244984312 1.0174411516754143 1.1158460008894877 0.5634884951983281 0.048127077322340846 628.9940382635217 1477979.4945681035 0.016425474604800275 0.0162488369211436 5.613059487781245e-07 6.250800355058391 0.09840484921407344 KIPDPDS(ph)DDVSEVDAR ddPTM_KYSE-520_SHP099_60min_R1 6 KIPDPDSDDVSEVDAR 16 1 P51532-5;A0A2R8YF58;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4P4;A0A2R8Y7F3;Q9HBD4;A0A2R8YF80;A0A2R8Y6N0;A0A2R8Y526;A0A2R8Y7Y7;A0A2R8Y7S2;A0A2R8YGG3;A0A0A0MT49;A0A2R8YDA1;A0A2R8Y6V2;A0A2R8Y4C5;P51532-2;P51532-3;P51532-4;P51532;A0A2R8Y7R0;A0A2R8YGP5;A0A2R8Y583 P51532-5 SMARCA4 Transcription activator BRG1 1 KIPDPDS(0.936)DDVS(0.064)EVDAR;KIPDPDS(0.7)DDVS(0.3)EVDAR;KIPDPDS(1)DDVSEVDAR;KIPDPDS(1)DDVSEVDAR;KIPDPDS(0.999)DDVS(0.001)EVDAR;KIPDPDS(0.998)DDVS(0.002)EVDAR 188.96 1.3782e-09 2377030000.0 3240060.0 3150100.0 3001150.0 2904220.0 3068770.0 2905720.0 2795150.0 2917850.0 3294990.0 2988890.0 True False 3060327.4129005205 2998764.467603503 3194608.9310097815 3180236.1956144166 3310264.740087163 2887584.323657891 3077711.0400351635 2907728.65938131 2696702.875938457 2962410.759921234 1.0330530304250887 1.0122716633945912 1.0783814905852966 1.073529788184733 1.1174226021833575 0.9747413703475298 1.038921098206177 0.9815413509565507 0.9103068731799226 1.0 21.498340264041147 -7.009846259368106 1.3438335676418873 0.9567132464026454 1.0568843100943281 0.4692702736168991 0.04138591307236981 0.40306191291271715 1.3847664438717129 0.03079801977670392 0.014317142761719462 9.775832250382832e-08 7.009846259368106 0.10017106369168272 KIPEFEVENS(ph)PLSDVAK ddPTM_KYSE-520_SHP099_60min_R1 1 KIPEFEVENSPLSDVAK 17 1 Q5VY60;Q7Z4H7-3;Q7Z4H7;Q5SYF9;Q7Z4H7-2 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 KIPEFEVENS(0.998)PLS(0.002)DVAK 154.1 1.9262e-06 1303400000.0 1067900.0 1083200.0 1170800.0 968850.0 1006100.0 1041700.0 950560.0 1128900.0 1361200.0 1144700.0 True False 1008661.4581941268 1031161.4460836527 1246271.6413462353 1060929.2127046245 1085274.3460740615 1035198.3639010045 1046651.8813715985 1124984.1093872415 1114040.393059592 1134558.8485631242 0.8890340588957183 0.9088655448675752 1.0984636389065152 0.935102849929954 0.9565606468527572 0.9124236836300241 0.9225188122212818 0.99156082631764 0.9819150363777798 1.0 20.113700011589856 -7.28841085906146 23.238419314584068 0.9900534818273088 0.9492432337237491 0.12237975984163618 0.05478415943741118 832.7940709094865 717520.5193464917 0.03134857034980957 0.01506926791960132 5.1474144921991864e-08 7.28841085906146 -0.04081024810355971 KIPIPET(ph)PPQT(ph)PPQVLDS(ph)PHQR ddPTM_KYSE-520_SHP099_60min_R1 8 KIPIPETPPQTPPQVLDSPHQR 22 1 G3V160;Q969H4-2;Q969H4 G3V160 CNKSR1 Connector enhancer of kinase suppressor of ras 1 3 KIPIPET(1)PPQT(1)PPQVLDS(1)PHQR;KIPIPET(1)PPQT(1)PPQVLDS(1)PHQR;KIPIPET(1)PPQT(1)PPQVLDS(1)PHQR;KIPIPET(1)PPQT(1)PPQVLDS(1)PHQR;KIPIPET(1)PPQT(1)PPQVLDS(1)PHQR;KIPIPET(1)PPQT(1)PPQVLDS(1)PHQR;KIPIPET(1)PPQT(1)PPQVLDS(1)PHQR;KIPIPET(1)PPQT(1)PPQVLDS(1)PHQR 173.95 4.1925999999999996e-10 4868635000.0 2856670.0 2746110.0 2544030.0 2675960.0 2712030.0 2822530.0 2708230.0 2980700.0 3743440.0 3008810.0 True False 2698204.8204695354 2614182.7536048554 2708022.2443919177 2930282.433843289 2925451.3316601072 2804913.5433056573 2982004.318177714 2970360.6474006074 3063725.660442989 2982154.2842187556 0.9047837782062952 0.8766088218301895 0.908075835889003 0.982605913231932 0.9809859091265953 0.9405662068354286 0.9999497121789321 0.9960452626879304 1.027353171046817 1.0 21.5079234678977 -5.193951527537782 0.5830750502076055 1.0056741513935252 0.857969126421548 0.771345230595625 0.022948100497730436 0.7550955795289217 0.39562123481774875 0.015318822540088204 0.06653437135354374 6.398062415320368e-06 5.193951527537782 -0.14770502497197724 KIPIPET(ph)PPQTPPQVLDS(ph)PHQR ddPTM_KYSE-520_SHP099_60min_R1 4 KIPIPETPPQTPPQVLDSPHQR 22 1 G3V160;Q969H4-2;Q969H4 G3V160 CNKSR1 Connector enhancer of kinase suppressor of ras 1 2 KIPIPET(0.969)PPQT(0.031)PPQVLDS(1)PHQR;KIPIPET(0.994)PPQT(0.006)PPQVLDS(1)PHQR;KIPIPET(0.999)PPQT(0.087)PPQVLDS(0.914)PHQR;KIPIPET(1)PPQT(0.001)PPQVLDS(1)PHQR 155.55 1.1390000000000001e-07 3127000000.0 1604930.0 1435730.0 1409570.0 1555200.0 1361000.0 1443010.0 1269240.0 1388790.0 1651210.0 1327100.0 True False 1515901.3335513638 1366755.3757253361 1500433.1375917436 1703005.7404120702 1468102.9569692863 1434003.6393326179 1397547.1657886829 1383972.6116360235 1351391.8876167582 1315342.926468176 1.1524761361067313 1.039086726527817 1.1407163161781337 1.2947237607342494 1.116137037290561 1.090212757811423 1.06249643166534 1.0521762680946822 1.027406511582023 1.0 20.327007546649483 -6.596087404117502 1.7122355281122341 1.033285441592446 1.1497534119066044 0.4492122734498287 0.05997138718593036 0.40012952046313405 2.3866018566888454 0.032452965716393556 0.02293431186965992 2.534618473463282e-07 6.596087404117502 0.11646797031415845 KIPIPETPPQTPPQVLDS(ph)PHQR ddPTM_KYSE-520_SHP099_60min_R1 5 KIPIPETPPQTPPQVLDSPHQR 22 1 G3V160;Q969H4-2;Q969H4 G3V160 CNKSR1 Connector enhancer of kinase suppressor of ras 1 1 KIPIPETPPQTPPQVLDS(1)PHQR;KIPIPETPPQTPPQVLDS(1)PHQR;KIPIPETPPQTPPQVLDS(1)PHQR;KIPIPETPPQTPPQVLDS(1)PHQR;KIPIPETPPQTPPQVLDS(1)PHQR 172.06 6.285599999999999e-10 1627340000.0 958410.0 918190.0 912470.0 784740.0 961590.0 947270.0 800010.0 932300.0 1176540.0 926500.0 True False 905245.0867570325 874078.7741687109 971289.2762036207 859321.4536593152 1037261.6623013188 941357.7365580351 880882.8181451919 929066.0689004555 962909.994159809 918291.9308060928 0.9857922697441025 0.9518528311595085 1.0577129599200614 0.9357824291290329 1.1295554578060947 1.0251181622947452 0.9592622875080014 1.0117328027535917 1.0485881034744033 1.0 19.808593342861617 -4.74668982156189 24.998336662134264 1.0201681373862235 0.9688225398955878 0.14277405027169043 0.05108005941522936 471.87548859142447 799745.6466760379 0.012828510937954632 0.033641125905586954 1.7918851834691526e-05 4.74668982156189 -0.05134559749063572 KIPLKPS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 3 KIPLKPSPSK 10 2 A6PW57;Q99755-4;Q99755-3;Q99755;A2A3N6 A6PW57 PIP5K1A;PIPSL Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha;Putative PIP5K1A and PSMD4-like protein 1 KIPLKPS(0.999)PS(0.001)K;KIPLKPS(0.996)PS(0.004)K;KIPLKPS(0.999)PS(0.001)K 95.65100000000001 0.0021244 3949790000.0 5636440.0 4890940.0 3890710.0 4599980.0 4394760.0 4636610.0 4425530.0 4467300.0 4761500.0 4468730.0 True False 5323775.437235419 4655971.900949392 4141511.391956105 5037160.716165579 4740602.6092361 4607671.197126851 4872905.761410595 4451803.978975659 3896931.627647113 4429140.528819326 1.201988377337527 1.0512134059992293 0.9350598304588239 1.1372772399949866 1.0703211104705679 1.0403081968489982 1.1001921771738326 1.0051168957067105 0.8798392379493807 1.0 22.07859534144341 -7.517555093323695 5.4065012760860816 0.9390732820541648 1.0700838353798119 0.37883202184956777 0.07040835629060742 0.17369109998338514 17.247732731167606 0.04494403752421911 0.01822815470116171 3.037000802497445e-08 7.517555093323695 0.13101055332564704 KIPNPDFFEDLEPFR ddPTM_KYSE-520_SHP099_60min_R1 1 KIPNPDFFEDLEPFR 15 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 0 103.61 0.0020783 165950000.0 236740.0 242280.0 171450.0 190300.0 319360.0 271330.0 223750.0 246300.0 302240.0 189860.0 False True 223607.56027051012 230640.50513030594 182501.94132969942 208386.05478421855 344491.8150901621 269636.5288252468 246368.83358956326 245445.6427868523 247360.83485037537 188177.98810884496 1.1882769207903965 1.2256508183991213 0.9698368186620082 1.107388047233691 1.8306700935228561 1.4328802828377833 1.3092330089482083 1.3043270642519722 1.3145046205260638 1.0 17.52173835487588 KIQALQQQADEAEDR ddPTM_KYSE-520_SHP099_60min_R1 3 KIQALQQQADEAEDR 15 1 P67936;A0A2R8Y5V9;A0A2R8YGX3;A0A590UJB9;A0A590UK79 P67936 TPM4 Tropomyosin alpha-4 chain 0 ;; 191.78 1.0383e-10 2290840000.0 1103960.0 1246950.0 1010380.0 687512.0 1080600.0 1039780.0 932327.0 998280.0 1116150.0 995710.0 False True 1042721.1381103002 1187044.650289891 1075510.71146516 752852.9337719791 1165637.072227047 1033290.3473331922 1026575.7117946682 994817.1996803028 913485.295851796 986888.7840506579 1.0565741094254613 1.20281501773452 1.0897993055010269 0.7628548889591337 1.1811230313538692 1.0470180267852274 1.0402141846025612 1.0080337478323576 0.9256213168239898 1.0 19.912527985927888 -5.012199984621743 24.99350556478952 1.000909185840461 1.1338477466357242 0.22508761280664968 0.10453006038141967 829.7727853574771 1699924.5218205394 0.02765484489813525 0.05142974557740631 9.722993946867956e-06 5.012199984621743 0.13293856079526312 KIQSSLSSAS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 4 KIQSSLSSASPSK 13 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 KIQSSLS(0.014)S(0.131)AS(0.826)PS(0.029)K;KIQSSLSS(0.01)AS(0.979)PS(0.01)K;KIQSSLS(0.001)S(0.034)AS(0.635)PS(0.33)K;KIQSSLS(0.002)S(0.037)AS(0.924)PS(0.037)K 216.83 2.8392999999999998e-11 4449020000.0 5641710.0 5424280.0 5029910.0 4687430.0 4787650.0 4879260.0 4448510.0 4515900.0 5876120.0 4677230.0 True False 5328753.0998299355 5163689.446789723 5354146.04674055 5132921.937872781 5164410.816997799 4848806.728470405 4898208.804073778 4500235.396918988 4809164.732930744 4635793.381029878 1.1494802856476989 1.1138739418197643 1.1549578694879374 1.1072369961261006 1.1140295506117843 1.045949706971885 1.0566063673410748 0.9707584068208029 1.0373984208636906 1.0 22.14438483566718 -6.42232787780815 1.0225830644677267 1.002502128452765 1.1371171704079976 0.8513953551424324 0.02283917114979497 0.17506653590089602 0.3804118168606883 0.01291128416420864 0.010033719281304202 3.7815698104743586e-07 6.42232787780815 0.13461504195523255 KIQVLQQQADDAEER ddPTM_KYSE-520_SHP099_60min_R1 2 KIQVLQQQADDAEER 15 1 P06753-5;P06753-2;A0A087WWU8;P06753-6;D6R904;Q5VU61;P06753-4;P06753-3 P06753-5;P06753-4 TPM3 Tropomyosin alpha-3 chain 0 ; 174.21 5.3666e-08 2171700000.0 974870.0 1108840.0 699140.0 571820.0 892630.0 931760.0 719890.0 812970.0 782560.0 801540.0 False True 920792.0177448363 1055569.6619972272 744207.6830635522 626165.6008760488 962874.902630046 925944.5402211777 792663.5066493452 810149.9968186235 640466.8307322321 794438.9791886838 1.1590468769359603 1.3286982256022 0.9367713601157511 0.7881858988282735 1.2120187048392017 1.1655326141811335 0.9977651240864945 1.0197762421551677 0.8061875707386679 1.0 19.59957688494484 -4.76470105145816 24.999945660586537 0.9986425293524743 1.2438725752140192 0.3703846505833118 0.1316741251586383 87.05155509938469 667252.8097481111 0.03616253685048463 0.08065058325627915 1.7190913241441738e-05 4.76470105145816 0.24523004586154484 KIS(ph)ADTIGDEGFFDLLSR ddPTM_KYSE-520_SHP099_60min_R1 8 KISADTIGDEGFFDLLSR 18 1 P81274;A0A2R8Y6E3;H0Y4A4 P81274 GPSM2 G-protein-signaling modulator 2 1 KIS(1)ADTIGDEGFFDLLSR;KIS(0.998)ADT(0.002)IGDEGFFDLLSR;KIS(1)ADTIGDEGFFDLLSR;KIS(0.999)ADT(0.001)IGDEGFFDLLSR;KIS(1)ADTIGDEGFFDLLSR;KIS(0.999)ADT(0.001)IGDEGFFDLLSR;KIS(0.999)ADT(0.001)IGDEGFFDLLSR;KIS(0.998)ADT(0.002)IGDEGFFDLLSR 231.29 1.1949000000000004e-19 1296623000.0 851565.0 844550.0 808034.0 654234.0 733766.0 879281.0 712718.0 750130.0 894846.0 765276.0 True False 804326.9918972579 803976.5503046062 860121.1645401128 716412.2026573754 791509.2096425608 873793.0811262736 784766.4908973705 747527.974111658 732364.523631946 758496.2500157178 1.0604231621192461 1.0599611405962073 1.1339820922282597 0.9445164727479267 1.0435242225998598 1.1520071208106388 1.0346346351496245 0.9855394461029537 0.9655479820984871 1.0 19.53278252228275 -7.159243250713675 4.042736773853509 0.9815066676157496 1.0639407832561516 0.31909355361460645 0.05310771723050261 0.2929784199660329 8.38448364083026 0.02779151231227873 0.015200344418063932 6.930375231813645e-08 7.159243250713675 0.08243411564040204 KIS(ph)ASEFDRPLRPIVVK ddPTM_KYSE-520_SHP099_60min_R1 1 KISASEFDRPLRPIVVK 17 3 C9JGT3;G5E9C5;O76074-2;O76074 C9JGT3 PDE5A cGMP-specific 3,5-cyclic phosphodiesterase 1 KIS(0.968)AS(0.032)EFDRPLRPIVVK 144.92 1.1432999999999999e-05 880810000.0 453370.0 364490.0 410190.0 449320.0 371770.0 316070.0 396860.0 439350.0 436290.0 308330.0 True False 428220.6623293118 346979.35328935616 436631.503727205 492023.2377070163 401026.1839180536 314097.2898897865 436978.48178035393 437825.9973950604 357070.73397588095 305598.43607711035 1.4012527937847845 1.1354094534757513 1.4287753214058714 1.6100319230130686 1.3122651708101816 1.027810527834415 1.4299107266049391 1.432684024876965 1.1684311561260177 1.0 18.221277634729418 -5.998306573436219 24.99926024925702 1.2432877559907343 1.3883056380256609 0.18847714728269005 0.1722923121240978 122.89943511010132 1814247.1757067381 0.05577356616410343 0.06279900469505537 1.003906870761792e-06 5.998306573436219 0.1450178820349266 KIS(ph)ENSYSLDDLEIGPGQLSSSTFDSEK ddPTM_KYSE-520_SHP099_60min_R1 14 KISENSYSLDDLEIGPGQLSSSTFDSEK 28 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 KIS(0.311)ENS(0.311)Y(0.27)S(0.107)LDDLEIGPGQLSSSTFDSEK;KIS(0.859)ENS(0.139)YS(0.001)LDDLEIGPGQLSSSTFDSEK;KIS(0.988)ENS(0.01)YS(0.002)LDDLEIGPGQLSSSTFDSEK;KIS(0.473)ENS(0.159)YS(0.367)LDDLEIGPGQLSSSTFDSEK;KIS(0.673)ENS(0.155)Y(0.017)S(0.155)LDDLEIGPGQLSSSTFDSEK;KIS(0.992)ENS(0.008)YSLDDLEIGPGQLSSSTFDSEK;KIS(0.992)ENS(0.001)YS(0.007)LDDLEIGPGQLSSSTFDSEK;KIS(0.896)ENS(0.099)YS(0.004)LDDLEIGPGQLSSSTFDSEK;KIS(0.463)ENS(0.108)YS(0.429)LDDLEIGPGQLSSSTFDSEK;KIS(0.319)ENS(0.319)Y(0.044)S(0.319)LDDLEIGPGQLSSSTFDSEK;KIS(0.977)ENS(0.022)YSLDDLEIGPGQLSSSTFDSEK;KIS(0.713)ENS(0.142)Y(0.003)S(0.142)LDDLEIGPGQLSSSTFDSEK;KIS(0.569)ENS(0.215)YS(0.215)LDDLEIGPGQLSSSTFDSEK;KIS(0.329)ENS(0.329)Y(0.013)S(0.329)LDDLEIGPGQLSSSTFDSEK 336.58 1.0501999999999998e-78 44148761000.0 5935714.100000001 6773998.699999999 5197634.0 5889761.100000001 5785640.899999999 7683235.9 7392396.100000001 8496784.2 9173807.4 8626617.5 True False 5606448.206320301 6448565.634472661 5532681.804148436 6449522.224122759 6240937.92303632 7635281.974796461 8139691.640621403 8467310.838774536 7508075.229025121 8550192.380356867 0.6557101825217995 0.7542012328620273 0.6470827272681218 0.7543131121750934 0.7299178363956106 0.8929953426940062 0.9519892978456784 0.9903064705569968 0.8781176954888295 1.0 23.02752545049983 -6.3119065140679576 1.9829093661431398 0.9564320346056358 0.7014415123728012 0.8770806366938837 0.04446987958931503 0.10523538914226178 0.8135651686584249 0.01730198000613231 0.01532869170747181 4.876334464475002e-07 6.3119065140679576 -0.2549905222328346 KIS(ph)ENSYSLDDLEIGPGQLSSSTFDSEKNESR ddPTM_KYSE-520_SHP099_60min_R1 10 KISENSYSLDDLEIGPGQLSSSTFDSEKNESR 32 2 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 KIS(0.733)ENS(0.195)Y(0.051)S(0.021)LDDLEIGPGQLSSSTFDSEKNESR;KIS(0.66)ENS(0.208)Y(0.062)S(0.069)LDDLEIGPGQLSSSTFDSEKNESR;KIS(0.995)ENS(0.004)YS(0.001)LDDLEIGPGQLSSSTFDSEKNESR;KIS(0.44)ENS(0.44)YS(0.12)LDDLEIGPGQLSSSTFDSEKNESR;KIS(1)ENSYSLDDLEIGPGQLSSSTFDSEKNESR;KIS(0.999)ENS(0.001)YSLDDLEIGPGQLSSSTFDSEKNESR;KIS(0.651)ENS(0.349)YSLDDLEIGPGQLSSSTFDSEKNESR;KIS(0.917)ENS(0.078)YS(0.005)LDDLEIGPGQLSSSTFDSEKNESR;KIS(0.472)ENS(0.472)YS(0.056)LDDLEIGPGQLSSSTFDSEKNESR;KIS(0.839)ENS(0.117)YS(0.044)LDDLEIGPGQLSSSTFDSEKNESR 298.51 4.5296e-54 44480174000.0 5582234.0 6936206.4 6043134.3 5756501.5 6202576.4 5976935.0 6178241.2 6864646.8 9215764.6 6432897.1 True False 5272576.352112405 6602980.633085941 6432684.406334743 6303597.671804717 6690683.874847839 5939630.7316335365 6802798.11431948 6840834.942471405 7542414.059160065 6375906.636412219 0.8269531931351071 1.0356143854705968 1.0089050503967971 0.9886590302005753 1.0493698004669572 0.931574295287332 1.0669538470763236 1.0729195599264303 1.1829555370346907 1.0 22.604199073155183 -6.908252109256516 5.8034437855058405 1.0910959330662215 0.9823245447171721 0.3437457158159002 0.07206082224475557 0.2399924124022662 12.207825762420306 0.029704305806380154 0.019843170638129036 1.2352301704387636e-07 6.908252109256516 -0.10877138834904942 KIS(ph)GTTALQEALK ddPTM_KYSE-520_SHP099_60min_R1 6 KISGTTALQEALK 13 1 J3KP58;P30622-2;P30622-1;P30622;F5H0N7;Q9UDT6;Q9UDT6-2 J3KP58;Q9UDT6 CLIP1;CLIP2 CAP-Gly domain-containing linker protein 1;CAP-Gly domain-containing linker protein 2 1 KIS(0.927)GT(0.064)T(0.009)ALQEALK;KIS(0.995)GT(0.005)T(0.001)ALQEALK;KIS(0.854)GT(0.053)T(0.093)ALQEALK;KIS(0.971)GT(0.025)T(0.004)ALQEALK;KIS(0.979)GT(0.021)TALQEALK;KIS(0.868)GT(0.026)T(0.106)ALQEALK 194.37 1.2155e-08 19370170000.0 14466080.0 12849330.0 11842330.0 10480000.0 10645470.0 12412360.0 11245900.0 10985260.0 13404420.0 10965420.0 True False 13663617.704984466 12232028.899562463 12605705.540197952 11476016.049073115 11483207.924561217 12334889.857108833 12382745.321407253 10947154.69703897 10970515.225929964 10868274.909767682 1.2572020691806862 1.1254802626099503 1.1598625950166923 1.0559188228445746 1.0565805539424546 1.134944594198943 1.139347819613807 1.0072578019903047 1.0094072258027256 1.0 23.373619627885756 -1.0000000000000002 0.23701713917094125 1.013436598386519 2.241596614452073 0.6479323489317811 0.046743112671543637 36.50106219324734 0.4846303075564945 0.07061476519556734 17.56778081760189 0.09999999999999995 1.0000000000000002 1.2281600160655541 KIS(ph)LEDIQAFEK ddPTM_KYSE-520_SHP099_60min_R1 2 KISLEDIQAFEK 12 1 Q8WXX5 Q8WXX5 DNAJC9 DnaJ homolog subfamily C member 9 1 KIS(1)LEDIQAFEK;KIS(1)LEDIQAFEK 165.71 1.9056e-06 1230120000.0 1685420.0 1401700.0 1511730.0 1422830.0 1394390.0 1449170.0 1312230.0 1596910.0 1651550.0 1491770.0 True False 1591926.3927985253 1334360.2280054074 1609178.5346535214 1558055.3354105633 1504120.5600061729 1440125.192487683 1444883.0145306503 1591370.6919315967 1351670.15218746 1478554.0783794965 1.0766778273969428 0.9024764447357067 1.088346079581472 1.0537695970635046 1.0172915431369933 0.9740091441674343 0.9772270325845979 1.0763019866515453 0.9141837772135452 1.0 20.49575558057621 -6.058560430169522 7.789305821879241 0.9926653011604809 1.0265807837585337 0.09621860732569576 0.06021718889991143 0.9339210915445896 113.00888046919773 0.019412083836885752 0.01952459786234989 8.738553909913668e-07 6.058560430169522 0.03391548259805277 KIS(ph)LPGQMAGTPITPLK ddPTM_KYSE-520_SHP099_60min_R1 3 KISLPGQMAGTPITPLK 17 1 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 KIS(1)LPGQMAGTPITPLK;KIS(1)LPGQMAGTPITPLK;KIS(1)LPGQMAGTPITPLK 181.69 2.0246e-09 932330000.0 2473660.0 2774060.0 1991790.0 1855620.0 2147030.0 3133800.0 2210080.0 2368940.0 2600800.0 2722820.0 True False 2336441.148681045 2640789.9936510525 2120183.970376679 2031977.5668875019 2315989.046070366 3114240.791775913 2433496.4547022237 2360722.7000547545 2128560.2808326413 2698697.933121905 0.8657660866765498 0.9785422670836437 0.7856321911226315 0.7529473906465965 0.8581875791453198 1.1539790183828762 0.9017298397257483 0.8747635928722951 0.7887360251431631 1.0 21.36383207344451 -6.032363841877811 24.982784370301058 0.9414602925973584 0.8452482286592766 0.17502320218693013 0.10402142398063653 1290.298615794178 996024.1126553285 0.03650023867640025 0.0365322952712101 9.281884461308757e-07 6.032363841877811 -0.0962120639380818 KIS(ph)LPIEDYFNK ddPTM_KYSE-520_SHP099_60min_R1 2 KISLPIEDYFNK 12 1 Q9UBD5;Q9UBD5-2 Q9UBD5 ORC3 Origin recognition complex subunit 3 1 KIS(1)LPIEDYFNK;KIS(0.999)LPIEDY(0.001)FNK 173.03 1.1389e-06 450810000.0 1012240.0 898240.0 893780.0 761650.0 761780.0 831530.0 808490.0 813000.0 976540.0 771250.0 True False 956089.0293495867 855087.2021142715 951394.4888985632 834036.9870015773 821727.7520647049 826340.1128296088 890220.0593020165 810179.8927556269 799224.9525700954 764417.3250234198 1.2507422294756265 1.1186130587608984 1.2446008976437248 1.0910754632308006 1.0749726951041163 1.0810065206257484 1.1645733687089608 1.059865947871871 1.04553484910302 1.0 19.54400095087113 -1.0000000005762608 0.14802944452859604 0.9843365778658366 1.8486687556135424 0.6137904457015401 0.048964020236709045 50.24329104466755 0.4901493527547121 0.18257952589927529 9.299294055211512 0.09999999986731105 1.0000000005762608 0.8643321777477058 KIS(ph)PPSYAR ddPTM_KYSE-520_SHP099_60min_R1 1 KISPPSYAR 9 1 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-4;Q8N2M8-3 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 1 KIS(0.94)PPS(0.06)YAR 92.295 0.0024634 1801600000.0 158800.0 136940.0 139760.0 131050.0 152880.0 135710.0 127440.0 129310.0 152510.0 138040.0 True False 149991.04744004842 130361.19684886935 148769.15322390661 143504.9525983808 164910.78623178852 134862.98355093162 140322.8788945427 128861.4537911809 124818.02846423644 136817.072993495 1.0962889656847123 0.9528138118776112 1.087358105015007 1.0488819082191867 1.2053377741799025 0.9857175029416373 1.0256240381725925 0.9418521458744235 0.912298631547036 1.0 17.061888745495143 -6.894631376469922 1.8869195482783823 0.9479514024063282 1.0680404706349789 0.3712311333783993 0.06589281852263774 0.3803603338727455 2.729932504334724 0.0376078363740176 0.02114458482830669 1.2745844728047048e-07 6.894631376469922 0.12008906822865062 KIS(ph)PVKFSNTDSVLPPKR ddPTM_KYSE-520_SHP099_60min_R1 2 KISPVKFSNTDSVLPPKR 18 3 G3V554;G3V4W8;G3V5H9;G3V2U6;Q9BRS7;G3V2F4;E7EPD8;Q9NUW8;G3V3Q0;G3V5F9;G3V5B8 G3V554 TDP1 Tyrosyl-DNA phosphodiesterase 1 1 KIS(0.999)PVKFSNTDSVLPPKR;KIS(1)PVKFSNTDSVLPPKR 63.726000000000006 0.028467000000000003 2465800000.0 1329050.0 1192370.0 1384330.0 814630.0 987340.0 977920.0 890930.0 770780.0 1515130.0 825400.0 True False 1255324.9471045104 1135086.7554161404 1473566.1268063155 892052.1902725598 1065038.0408038597 971816.4385389948 980993.899038882 768106.3440814051 1240020.585319116 818087.5981514821 1.5344627518385467 1.3874880367101725 1.801232692117478 1.0904115797479452 1.3018630806901081 1.1879124445045643 1.1991306325331132 0.938904764987255 1.515755266454371 1.0 19.64189580495402 -5.2767648670573735 24.9910982354162 1.1804059993306155 1.5557038613991576 0.5123980265077027 0.1776564954406885 619.8473796674252 1010776.7119214617 0.0473002114160809 0.07045300081163036 5.287314366910856e-06 5.2767648670573735 0.3752978620685421 KIS(ph)SDLDGHPVPK ddPTM_KYSE-520_SHP099_60min_R1 3 KISSDLDGHPVPK 13 1 P29401;P29401-2;E9PFF2;F8W888 P29401 TKT Transketolase 1 KIS(0.5)S(0.5)DLDGHPVPK;KIS(0.966)S(0.034)DLDGHPVPK;KIS(0.844)S(0.156)DLDGHPVPK 99.45100000000001 0.00090366 943370000.0 2349640.0 2223400.0 1945830.0 1785940.0 1973300.0 1956590.0 1800160.0 1701540.0 2230350.0 1920650.0 True False 2219300.7853087825 2116584.52660856 2071261.315238078 1955675.2006375578 2128587.4834588487 1944378.1960497883 1982137.7406685534 1695637.7548824202 1825374.6625480917 1903634.5352430867 1.1658229267338787 1.1118649548655515 1.0880561772186939 1.0273375295683138 1.1181702391142196 1.0214030897487887 1.041238590691696 0.8907370209407836 0.9588892346476571 1.0 20.860325102171185 -6.723563397936454 1.277502435815796 0.9457340022272701 1.1012298039764683 0.6519214640984257 0.04582406433488823 0.2765582282453367 0.9121255625702517 0.02886362008122965 0.017229670937580266 1.8898903264782338e-07 6.723563397936454 0.1554958017491982 KIS(ph)TEDINK ddPTM_KYSE-520_SHP099_60min_R1 6 KISTEDINK 9 1 E5RJM2;E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RIY8;E5RIU4 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 KIS(0.954)T(0.046)EDINK;KIS(0.731)T(0.269)EDINK;KIS(0.984)T(0.016)EDINK;KIS(0.534)T(0.466)EDINK;KIS(0.788)T(0.212)EDINK;KIS(0.801)T(0.199)EDINK 138.42 0.00028917 7006890000.0 6221720.0 6056690.0 5717610.0 5830900.0 5874970.0 5922100.0 5587570.0 5863240.0 6718270.0 5660850.0 True False 5876588.788908675 5765717.521122961 6086176.289099451 6385066.982875982 6337296.714993265 5885137.97720855 6152416.105028094 5842901.788930506 5498401.521804638 5610699.273074658 1.0473897286047753 1.0276290423891057 1.0847446980996778 1.1380162564615537 1.1295021184623986 1.0489134581585764 1.096550680331968 1.0413856641667059 0.9799850703442745 1.0 22.4197491574359 -7.551634117256672 3.373204745797532 0.9907082059830022 1.082372598987964 0.5449758655690552 0.033416386099377096 0.20606037922596124 4.782288273698596 0.028477297204483568 0.009912838418627818 2.8077981447641427e-08 7.551634117256672 0.09166439300496176 KIS(ph)VVSATK ddPTM_KYSE-520_SHP099_60min_R1 1 KISVVSATK 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KIS(0.5)VVS(0.5)ATK 132.97 0.0003431 980400000.0 1626000.0 1126300.0 1205600.0 883800.0 881370.0 1173700.0 1295700.0 1088400.0 1494200.0 1248000.0 True False 1535802.5386493613 1072190.8573892347 1283314.905028203 967796.0862758405 950728.8046906822 1166374.5029380908 1426682.0008133955 1084624.5944344702 1222890.9457167534 1236943.6909293064 1.2416107134962018 0.8668065209853698 1.037488540859979 0.7824091697729123 0.7686112243124074 0.9429487465688939 1.1533928434054586 0.8768585040597927 0.9886391391009922 1.0 20.238348395696597 -4.25382114595876 24.214359391364418 0.9316616580084177 1.2416109483321136 0.4039520754278281 0.11157031162090068 638.0667797260629 2028002.6526820096 0.02895428008856022 0.2923223824444469 5.574152601280535e-05 4.25382114595876 0.3099492903236959 KIS(ph)VVSTK ddPTM_KYSE-520_SHP099_60min_R1 1 KISVVSTK 8 1 Q9UKV3-5 Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KIS(0.866)VVS(0.114)T(0.02)K 81.09 0.010424 477480000.0 793950.0 590210.0 496550.0 429420.0 518590.0 613190.0 575110.0 558860.0 750580.0 572690.0 True False 749908.0107999134 561855.4256767284 528558.4075080901 470231.94769016973 559400.0826265265 609362.8537587189 633247.7313327095 556921.4450989045 614293.5925820364 567616.4121460777 1.3211527974757051 0.9898505639617292 0.9311894374401283 0.8284326133423257 0.9855248556177464 1.073546924858645 1.1156261830740395 0.9811581081548769 1.082233669494296 1.0 19.114556778739157 -6.254711235789283 23.008550586539435 1.0534049342293383 0.9954401856009334 0.016686110216772243 0.12305199088842549 696.1094015675202 2380516.787244527 0.042996505130560136 0.041986146346206975 5.562740032367039e-07 6.254711235789283 -0.05796474862840495 KISAS(ph)EFDRPLRPIVVK ddPTM_KYSE-520_SHP099_60min_R1 1 KISASEFDRPLRPIVVK 17 3 C9JGT3;G5E9C5;O76074-2;O76074 C9JGT3 PDE5A cGMP-specific 3,5-cyclic phosphodiesterase 1 KIS(0.333)AS(0.667)EFDRPLRPIVVK 97.488 0.0014513 865240000.0 217560.0 202910.0 209270.0 209320.0 180710.0 239070.0 230400.0 196800.0 240590.0 234680.0 True False 205491.51310489225 193161.89902588047 222759.87904383894 229213.70986564725 194930.84890074932 237577.8754514865 253691.08048730882 196117.34673346512 196904.92078034623 232600.91777827707 0.883450998679092 0.8304434086971609 0.9576913159740026 0.9854376846618523 0.8380484942306371 1.0213969820959763 1.090671021036708 0.8431494966000551 0.8465354421689881 1.0 17.82749726373099 -4.767739396740509 24.995020703828757 0.94741054330655 0.8569471963445968 0.16965111923917375 0.08045252316649128 248.83095764572468 987239.8874898293 0.022072283963552437 0.047828531588774155 1.7071064500343905e-05 4.767739396740509 -0.09046334696195313 KISENS(ph)YSLDDLEIGPGQLSSSTFDSEK ddPTM_KYSE-520_SHP099_60min_R1 3 KISENSYSLDDLEIGPGQLSSSTFDSEK 28 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 KIS(0.112)ENS(0.315)Y(0.259)S(0.315)LDDLEIGPGQLSSSTFDSEK;KIS(0.36)ENS(0.48)YS(0.16)LDDLEIGPGQLSSSTFDSEK;KIS(0.287)ENS(0.356)Y(0.002)S(0.356)LDDLEIGPGQLSSSTFDSEK 236.31 5.0268e-31 2731241000.0 725459.0 812702.0 644968.0 754751.0 737700.0 936967.0 879900.0 1062888.0 1121820.0 1082906.0 True False 685216.3431033373 773658.5760294272 686543.669265287 826482.3081158379 795752.793061163 931119.0414027377 968848.8789964552 1059201.0896079245 918125.7667808649 1073312.2953281186 0.6384128329526517 0.7208140439618412 0.6396494964733503 0.7700296658422019 0.7413991216954207 0.8675192164067109 0.9026719280247057 0.9868526562291171 0.8554134437639959 1.0 20.03363847893988 -6.21475104074341 0.8725448435580386 0.9546664591807301 0.6656278326510964 0.8546906430838086 0.04730551338726198 0.2010994456560576 0.3317671162169935 0.027581150602885414 0.026983880085267004 6.098864143598437e-07 6.21475104074341 -0.28903862652963375 KISENS(ph)YSLDDLEIGPGQLSSSTFDSEKNESR ddPTM_KYSE-520_SHP099_60min_R1 2 KISENSYSLDDLEIGPGQLSSSTFDSEKNESR 32 2 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 KIS(0.278)ENS(0.63)Y(0.001)S(0.09)LDDLEIGPGQLSSSTFDSEKNESR;KIS(0.405)ENS(0.504)YS(0.091)LDDLEIGPGQLSSSTFDSEKNESR 111.27 0.00018798 185746000.0 170892.0 233324.0 212609.0 203935.0 181466.0 179524.0 202037.0 225993.0 305925.0 184304.0 True False 161412.28009524374 222114.76481353602 226314.11632642781 223316.92108470653 195746.34179969743 178403.52412495326 222460.87165110448 225209.083030163 250376.73174166592 182671.20994634245 0.8836218917182227 1.2159264991937133 1.2389150780405132 1.2225074829816 1.0715774087071281 0.9766373375276663 1.2178211975299762 1.2328657761467476 1.3706414481801001 1.0 17.478889749121603 -6.956364981128731 24.99964296509625 1.2261214715109114 1.115455839899855 0.11137189884928433 0.13557355685928393 286.3870944583882 164077.97832087622 0.05723778933509908 0.03858968501570906 1.1056941679114778e-07 6.956364981128731 -0.11066563161105636 KISVVS(ph)ATK ddPTM_KYSE-520_SHP099_60min_R1 1 KISVVSATK 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KIS(0.191)VVS(0.809)AT(0.001)K 106.97 0.00089567 717700000.0 1338300.0 810710.0 956720.0 649500.0 734740.0 915230.0 987120.0 875380.0 1190900.0 895040.0 True False 1264061.8311650925 771762.2746994809 1018391.7020061241 711228.284720705 792559.8579012593 909517.7100826699 1086907.7229628158 872343.5110952271 974662.5801459511 887110.6419305828 1.4249201524785748 0.8699729641614106 1.147987245187184 0.8017357149192662 0.8934171460015895 1.0252584819671686 1.225222279599107 0.9833536763765807 1.0986933693240706 1.0 19.758754525535817 -4.249431103049711 24.543772459456697 1.0066842889576673 1.4249204821189676 0.5128915528813066 0.12273891792586161 1235.7739892059956 2525746.7529595955 0.031166571750388908 0.49548584162960707 5.630784376866188e-05 4.249431103049711 0.41823619316130034 KITES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 KITESPR 7 1 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KIT(0.033)ES(0.967)PR;KIT(0.012)ES(0.988)PR;KIT(0.073)ES(0.927)PR;KIT(0.07)ES(0.93)PR;KIT(0.227)ES(0.773)PR 98.943 0.0035515 8595510000.0 20273800.0 17744100.0 16821600.0 16451180.0 17812300.0 17599600.0 15924000.0 16593450.0 20611200.0 17262300.0 True False 19149171.899181694 16891646.801562916 17905947.251511626 18014695.200972393 19214026.671876572 17489754.36815985 17533753.32326349 16535891.194890363 16868725.646069553 17109369.45186619 1.1192213689145052 0.9872746537553126 1.04655798694899 1.052914033544787 1.1230119687304325 1.022232550262229 1.0248041795222915 0.966481625252807 0.9859349693468458 1.0 24.02828325598344 -6.857903615074777 2.145796133871495 0.9835759785340493 1.0592737384143764 0.4361649196843913 0.038375633672674624 0.31246277808565565 2.9228330128801496 0.02002288259818805 0.012021648307467674 1.387063631977107e-07 6.857903615074777 0.07569775988032712 KIVEPEVVGES(ph)DS(ph)EVEGDAWR ddPTM_KYSE-520_SHP099_60min_R1 6 KIVEPEVVGESDSEVEGDAWR 21 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 2 KIVEPEVVGES(1)DS(1)EVEGDAWR;KIVEPEVVGES(1)DS(1)EVEGDAWR;KIVEPEVVGES(1)DS(1)EVEGDAWR;KIVEPEVVGES(1)DS(1)EVEGDAWR;KIVEPEVVGES(1)DS(1)EVEGDAWR;KIVEPEVVGES(1)DS(1)EVEGDAWR 148.89 6.2788e-07 5107280000.0 4174980.0 4608800.0 4464050.0 3593060.0 3725670.0 3901950.0 3106560.0 3373880.0 5724170.0 3662220.0 True False 3943385.536783709 4387386.330050165 4751809.805732537 3934543.342107121 4018859.032837444 3877596.4826951404 3420601.4019038817 3362176.7977495086 4684805.022582963 3629775.5799640445 1.0863992690211364 1.2087210995269368 1.3091194485857462 1.0839632521154643 1.107192151223094 1.0682744421167631 0.9423726967543721 0.9262767693706324 1.2906596893875653 1.0 21.791448922040605 -5.664744104910231 2.0282482955034102 1.040403247208007 1.1993541005825508 0.24652027723964065 0.10923971288876143 0.4315507340598853 3.6352972020353334 0.03669394461845985 0.05114485894457926 2.163993216709921e-06 5.664744104910231 0.15895085337454384 KIVEPEVVGES(ph)DSEVEGDAWR ddPTM_KYSE-520_SHP099_60min_R1 2 KIVEPEVVGESDSEVEGDAWR 21 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 KIVEPEVVGES(0.999)DS(0.001)EVEGDAWR;KIVEPEVVGES(0.998)DS(0.002)EVEGDAWR 179.86 2.0470999999999998e-10 387450000.0 442330.0 511770.0 393500.0 292400.0 370570.0 347610.0 285640.0 276365.0 506930.0 332090.0 True False 417793.0731370056 487183.8010175695 418865.6396222606 320189.6080867344 399731.7507451194 345440.4370506174 314515.27877775626 275406.35431907594 414884.29066536814 329147.9409621101 1.2693169883298765 1.4801362560358586 1.2725756035353062 0.9727832632062343 1.2144440265270702 1.0494990065588252 0.9555438136979314 0.8367251319089349 1.260479678082287 1.0 18.328376647210547 -5.106601290829215 4.171137570177165 1.0392538168712544 1.376226634613552 0.5520453941645833 0.12539534636282554 0.16174023250451677 4.78763324645538 0.03436871171650992 0.06350202591499667 7.823457167055573e-06 5.106601290829215 0.3369728177422977 KIY(ph)S(ph)T(ph)LAGT(ph)RKDVEVTK ddPTM_KYSE-520_SHP099_60min_R1 1 KIYSTLAGTRKDVEVTK 17 3 O75746-2;Q9UJS0;Q9UJS0-2;O75746 O75746-2 SLC25A12;SLC25A13 Calcium-binding mitochondrial carrier protein Aralar1;Calcium-binding mitochondrial carrier protein Aralar2 4 KIY(0.999)S(0.999)T(0.999)LAGT(0.999)RKDVEVT(0.003)K 41.257 0.047554 482210000.0 300200.0 292950.0 233380.0 234690.0 268650.0 232850.0 290440.0 289150.0 312790.0 242830.0 True False 283547.3075661365 278876.24227308517 248424.04822120297 256994.86703787855 289791.2265905943 231396.69677867802 319800.5096212414 288147.0061381176 255995.2207942329 240678.71511888131 1.178115428387926 1.158707541443108 1.0321812134425594 1.0677922512214593 1.204058391484491 0.9614339874815331 1.3287444611098183 1.1972267925553353 1.063638804402733 1.0 17.876749034403613 -6.747461051395197 24.999967396835583 1.1638381576385417 1.1031639620038238 0.03645901230480708 0.10509585399986736 684.7644786134052 1224689.0385291197 0.039485765814451936 0.030426468345788604 1.788705937493517e-07 6.747461051395197 -0.060674195634717876 KIYEDGDDDMKR ddPTM_KYSE-520_SHP099_60min_R1 4 KIYEDGDDDMKR 12 2 Q9HB71-3;Q9HB71 Q9HB71-3 CACYBP Calcyclin-binding protein 0 ;;; 135.58 2.9028e-05 5040980000.0 2491640.0 2695390.0 1871040.0 1378560.0 2461690.0 2193150.0 1525310.0 1779920.0 2398110.0 1918880.0 False True 2353423.7622388024 2565899.418537128 1991650.2321698458 1509577.9279208237 2655410.997899868 2179461.7373423125 1679503.2203910463 1773745.8729564508 1962673.6754335426 1901880.2160660485 1.2374195505891274 1.349138287922555 1.0472006677105472 0.7937292344537429 1.396203070765657 1.1459511061377086 0.8830751832862646 0.9326275429823664 1.031964925474246 1.0 20.858994954781654 -1.000000125211676 0.3128587753024265 0.9781890031320571 4.019991760473855 0.22786391174648368 0.1652709975648771 85.85781212180443 1.2268821420645513 0.16983063575091906 148.2805858233645 0.09999997116895032 1.000000125211676 3.0418027573417974 KIYS(ph)TLAGTR ddPTM_KYSE-520_SHP099_60min_R1 1 KIYSTLAGTR 10 1 O75746-2;Q9UJS0;Q9UJS0-2;O75746 O75746-2 SLC25A12;SLC25A13 Calcium-binding mitochondrial carrier protein Aralar1;Calcium-binding mitochondrial carrier protein Aralar2 1 KIY(0.289)S(0.355)T(0.355)LAGT(0.001)R 53.683 0.041798 3514000000.0 2261900.0 2135400.0 2038200.0 2035100.0 2063000.0 1910900.0 1790200.0 1948200.0 2323500.0 1973300.0 True False 2136427.8980141366 2032812.1786992513 2169585.633235304 2228515.2921248716 2225346.363135661 1898973.3642876344 1971170.8866683186 1941442.1489132997 1901610.9706684984 1955818.097204171 1.092344886811379 1.0393666883464996 1.1092982708037689 1.1394287103235825 1.137808452798744 0.9709355726906322 1.0078498043790955 0.9926496496215974 0.9722841676262424 1.0 20.899340766575015 -6.266680817880127 24.97212086847431 0.9894785610086368 1.1023797063410945 0.8079247945677893 0.028008536942909463 210.53424003564567 1003059.1605822267 0.01087623262486475 0.009864823360365406 5.411518931639546e-07 6.266680817880127 0.11290114533245765 KKAENAEGQTPAIGPDGEPLDET(ph)SQMS(ph)DLPVK ddPTM_KYSE-520_SHP099_60min_R1 1 KKAENAEGQTPAIGPDGEPLDETSQMSDLPVK 32 2 P51532-5;A0A2R8YF58;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4P4;A0A2R8Y7F3;Q9HBD4;A0A2R8YF80;A0A2R8Y6N0;A0A2R8Y526;A0A2R8Y7Y7;A0A2R8Y7S2;A0A2R8YGG3;A0A0A0MT49;A0A2R8YDA1;A0A2R8Y6V2;A0A2R8Y4C5;P51532-2;P51532-3;P51532-4;P51532;A0A2R8Y7R0;A0A2R8YGP5 P51532-5 SMARCA4 Transcription activator BRG1 2 KKAENAEGQTPAIGPDGEPLDET(0.536)S(0.473)QMS(0.99)DLPVK 115.41 0.00097634 1101800000.0 950020.0 951340.0 804710.0 845420.0 863160.0 735370.0 720190.0 864460.0 1010300.0 786290.0 True False 897320.4967820814 905636.1984095465 856582.8941815236 925768.4626152088 931085.7812914102 730780.2830583489 792993.8335770628 861461.3900264808 826854.98759044 779324.0823243635 1.1514086592907398 1.1620790617793464 1.0991356659051683 1.1879120427718202 1.194735030533654 0.9377103821541984 1.017540522053327 1.1053955723492332 1.0609899095178912 1.0 19.571863872984164 -6.245147321800751 24.99887825489321 1.0304903236970873 1.1574965675238267 0.67227937601987 0.04692799427899473 565.0810892324278 867072.9744447137 0.01655890248420906 0.016514380047001953 5.686599967193686e-07 6.245147321800751 0.12700624382673942 KKAENAEGQTPAIGPDGEPLDETSQMS(ph)DLPVK ddPTM_KYSE-520_SHP099_60min_R1 2 KKAENAEGQTPAIGPDGEPLDETSQMSDLPVK 32 2 P51532-5;A0A2R8YF58;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4P4;A0A2R8Y7F3;Q9HBD4;A0A2R8YF80;A0A2R8Y6N0;A0A2R8Y526;A0A2R8Y7Y7;A0A2R8Y7S2;A0A2R8YGG3;A0A0A0MT49;A0A2R8YDA1;A0A2R8Y6V2;A0A2R8Y4C5;P51532-2;P51532-3;P51532-4;P51532;A0A2R8Y7R0;A0A2R8YGP5 P51532-5 SMARCA4 Transcription activator BRG1 1 KKAENAEGQTPAIGPDGEPLDET(0.015)S(0.066)QMS(0.919)DLPVK;KKAENAEGQTPAIGPDGEPLDETS(0.001)QMS(0.999)DLPVK 116.3 0.00014683 1645910000.0 672000.0 719920.0 602860.0 589710.0 644100.0 637490.0 615390.0 611310.0 774440.0 655350.0 True False 634722.8204012122 685333.9625780492 641721.3202101047 645755.8610972228 694787.0055723122 633511.1884450909 677599.6268276257 609189.5082908266 633821.2180436896 649544.1088545852 0.9771820138904669 1.0550999589336223 0.9879564935808973 0.9941678360164906 1.069653309299516 0.9753166564195818 1.0431926294005098 0.9378724246534689 0.9757939597995561 1.0 19.309067973112363 -7.260297724203274 24.999971709565123 0.9676248948543572 1.0149961900074793 0.25329457614068873 0.03400027517079538 129.20870644850788 2829494.10563631 0.01607330629755517 0.008540325319136089 5.4916427328429767e-08 7.260297724203274 0.047371295153122106 KKAEPSEVDMNS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 18 KKAEPSEVDMNSPK 14 2 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK;KKAEPSEVDMNS(1)PK 203.59 1.3885999999999998e-11 107672330000.0 65187540.0 59126800.0 61125360.0 52120730.0 51777290.0 52454460.0 53384170.0 52806290.0 61198760.0 56604640.0 True False 61571457.208060786 56286259.77686383 65065598.509633906 57074268.50853118 55851868.15051891 52127072.25814599 58780762.882891424 52623117.305070765 50086607.879194565 56103166.92734353 1.0974684778097994 1.0032635029276942 1.1597491206494133 1.017309211482576 0.9955207737711123 0.9291288729859619 1.047726288945783 0.9379705315605514 0.8927590120546899 1.0 25.74157887499957 -5.636571916827826 2.8099749879113514 0.9647060067873743 1.0794179343940187 0.4901153263461747 0.054073219059787674 0.23241307898931318 3.702709310036481 0.016781806189417613 0.02270241287048742 2.3090220656374365e-06 5.636571916827826 0.11471192760664439 KKAS(ph)LTSK ddPTM_KYSE-520_SHP099_60min_R1 1 KKASLTSK 8 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 KKAS(0.996)LT(0.004)SK 83.397 0.0062513 0.0 1522000.0 3062800.0 789100.0 1828400.0 1429900.0 3245800.0 2135500.0 2177000.0 854550.0 6879600.0 True False 1437571.6259682206 2915658.490643471 839966.6486046399 2002170.586271494 1542424.9949819094 3225541.7582316212 2351377.1804715656 2169448.4951156173 699385.2614524493 6818652.096247817 0.21082929671089842 0.42760041860002007 0.123186611774321 0.2936314330178618 0.22620673018802034 0.4730468298868891 0.3448448677657988 0.3181638342143055 0.10256943037720145 1.0 22.70105514636676 -11.012925900508263 2.856512344769837 1.7760603682134812 0.2872623261399246 0.7830574681320297 0.11363273389167494 51281753.697386086 29286309.891940095 261083356.3246444 0.028218682029138083 9.706755701570326e-12 11.012925900508263 -1.4887980420735567 KKDAS(ph)DDLDDLNFFNQK ddPTM_KYSE-520_SHP099_60min_R1 4 KKDASDDLDDLNFFNQK 17 2 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 KKDAS(1)DDLDDLNFFNQK;KKDAS(1)DDLDDLNFFNQK;KKDAS(1)DDLDDLNFFNQK;KKDAS(1)DDLDDLNFFNQK 169.39 1.804e-08 3374150000.0 3069280.0 2967860.0 2911900.0 2528990.0 2850670.0 2745840.0 2435200.0 2512290.0 3270880.0 2769850.0 True False 2899020.919942014 2825279.5507513173 3099605.7332047285 2769344.44923143 3075001.5109064197 2728702.1940423655 2681373.781261699 2503575.4523628927 2676970.644174817 2745311.283910689 1.0559898751490089 1.0291290344046937 1.1290543813266043 1.0087542587471194 1.1200921108392807 0.9939500158085302 0.9767102903689991 0.9119459301520648 0.9751064150224448 1.0 21.388538311375353 -6.47169555511343 4.521081695618226 0.9610403031099826 1.0664682865523056 0.5979635183877428 0.040131774164250546 0.14094116324565917 6.1490626293615325 0.014204563249206721 0.012034029385283721 3.375238334154019e-07 6.47169555511343 0.10542798344232307 KKDDDDEEIGGPK ddPTM_KYSE-520_SHP099_60min_R1 3 KKDDDDEEIGGPK 13 2 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit 0 ;; 111.74 0.00010139 3735500000.0 5075560.0 4589370.0 3210620.0 3051110.0 4421200.0 4665420.0 3700410.0 4710210.0 4163640.0 4192030.0 False True 4794008.568921988 4368889.7764151925 3417581.702373629 3341086.577050332 4769123.286813083 4636301.383230327 4074483.555321369 4693871.380881282 3407627.932822982 4154891.875549991 1.1538227016527105 1.0515050468881033 0.8225440768951988 0.8041332186551945 1.1478333082209955 1.1158657125383342 0.980647313423053 1.1297216682106666 0.8201484021463031 1.0 21.9863795029654 -2.873210828292132 14.818594161304578 1.0036365180210056 1.1562505058554722 0.0 0.13451338686668107 0.0 0.0 0.031752424500242224 0.0 0.0013390264990970648 2.873210828292132 0.15261398783446656 KKDDDDEEIGGPKEELIPEK ddPTM_KYSE-520_SHP099_60min_R1 1 KKDDDDEEIGGPKEELIPEK 20 3 A0A0B4J1W3;Q9BXJ9 A0A0B4J1W3 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit 0 123.19 2.4562e-05 681250000.0 919300.0 1010000.0 643410.0 494120.0 875370.0 917600.0 616530.0 771490.0 816260.0 765670.0 False True 868304.5964208837 961478.0839590913 684885.238092399 541081.0162374051 944256.6388260132 911872.9180335623 678854.869152955 768813.8812571188 668047.7602400983 758886.7594822462 1.1441820345018119 1.2669585704922088 0.9024867406563594 0.7129930908355285 1.2442655337276358 1.2015928682899824 0.8945404049691243 1.013081163494861 0.8802996651251062 1.0 19.533525098256902 -4.757887182164952 24.99993355221751 0.9862232626475868 1.2055703428695843 0.26518325305322743 0.1492347882221425 128.37313702972892 903437.099118754 0.040809277510563124 0.099405430630304 1.7462757287048882e-05 4.757887182164952 0.21934708022199756 KKDDSFLGK ddPTM_KYSE-520_SHP099_60min_R1 1 KKDDSFLGK 9 2 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 0 64.82 0.028897000000000003 0.0 593550.0 533490.0 412420.0 380850.0 543600.0 513880.0 426690.0 547350.0 503050.0 459720.0 False True 560624.59828741 507860.3396151841 439005.2530953308 417045.86949327186 586378.2273390915 510672.6843058925 469823.9892930983 545451.3706024509 411708.8008585277 455647.2384567475 1.2303917394215207 1.114591062452786 0.9634761632314898 0.9152823375069354 1.2869127207379172 1.120763259831253 1.0311134352188036 1.1970913561330145 0.9035691783252393 1.0 18.79755779820466 -7.773213807586171 24.99881911929031 0.9517845471014088 1.1003668449995934 0.23613849924203245 0.11140945953520341 395.99649384921867 840731.0839730817 0.10722116710457454 0.028607123516086446 1.6857229225486014e-08 7.773213807586171 0.14858229789818456 KKDEEFQR ddPTM_KYSE-520_SHP099_60min_R1 2 KKDEEFQR 8 2 V9GY93;Q9HC07-2;Q9HC07 V9GY93 TMEM165 Transmembrane protein 165 0 ; 131.11 0.00052614 1786180000.0 1349280.0 1371150.0 895710.0 1144870.0 1558880.0 1375820.0 1057590.0 1623640.0 1494790.0 948010.0 False True 1274432.7486770048 1305277.895861889 953448.8997866719 1253678.1005822832 1681554.9871860982 1367232.9970454853 1164501.518283739 1618007.9718004265 1223373.8165894414 939611.36894062 1.3563402815292505 1.3891678400332104 1.0147268661315296 1.3342517364341417 1.789628183279641 1.4551047829348789 1.2393437933777611 1.7219970141747813 1.301999802289274 1.0 19.841704643954465 -4.252894374348534 18.283926956143727 1.384178485001812 1.3563400588888388 0.0 0.24451522736665335 591.4368921845842 1264021.174857169 0.0613499219389866 0.5560561732734876 5.5860603793671986e-05 4.252894374348534 -0.027838426112973158 KKDELER ddPTM_KYSE-520_SHP099_60min_R1 6 KKDELER 7 2 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 0 ;;;;; 109.48 0.0020148 35037250000.0 27657360.0 27855470.0 9782820.0 9954070.0 34258240.0 32626580.0 18626700.0 21152700.0 16283480.0 25270610.0 False True 26123151.107219703 26517251.4092871 10413436.230265426 10900101.819999725 36954168.58527808 32422945.41200462 20509668.615073603 21079326.220777277 13326810.50512638 25046732.05563709 1.042976426992213 1.058711026667411 0.4157602759167836 0.4351905787863657 1.4754087879884141 1.2944980343137187 0.8188560715032537 0.8415998611696371 0.5320778165999108 1.0 24.578119045888226 -10.370009910264635 3.0264300524717678 1.0014232304368695 0.884860627273985 0.011265802545171733 0.33536794828261685 269683647.17486423 328030813.36811054 3361915.104660607 0.08876347764264843 4.265697846975197e-11 10.370009910264635 -0.11656260316288458 KKDELS(ph)DYAEK ddPTM_KYSE-520_SHP099_60min_R1 13 KKDELSDYAEK 11 2 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LP59 P46100-2 ATRX Transcriptional regulator ATRX 1 KKDELS(1)DYAEK;KKDELS(0.999)DY(0.001)AEK;KKDELS(0.979)DY(0.021)AEK;KKDELS(0.999)DY(0.001)AEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK;KKDELS(1)DYAEK 192.4 4.4534999999999995e-07 24922490000.0 24042170.0 20662170.0 19354210.0 21308230.0 21719840.0 21315850.0 20062260.0 21085950.0 24838160.0 21016790.0 True False 22708502.90322231 19669528.338650536 20601813.344430894 23333357.772647038 23429067.839015245 21182809.873436905 22090349.02958906 21012807.760947745 20328176.26305985 20830597.591415174 1.0901512932389934 0.9442613565132119 0.9890169138940801 1.1201482660422242 1.1247429525819734 1.016908409875235 1.060476010476678 1.008747236786316 0.9758806089863508 1.0 24.312200892442924 -7.442862199215327 4.063761305777727 0.9885447174193269 1.0472558098664222 0.18440397824371513 0.05345930545930191 0.4439417404584643 13.490536562797857 0.036418704718589934 0.01550635950633661 3.606930720687634e-08 7.442862199215327 0.05871109244709527 KKDS(ph)PEPQVK ddPTM_KYSE-520_SHP099_60min_R1 2 KKDSPEPQVK 10 2 Q96JQ2 Q96JQ2 CLMN Calmin 1 KKDS(1)PEPQVK;KKDS(1)PEPQVK 99.531 0.0016761 1019070000.0 1029280.0 966340.0 781450.0 1038930.0 935630.0 958910.0 859570.0 1041710.0 1211030.0 779920.0 True False 972183.786581189 919915.5758940884 831823.5173642085 1137669.5948343046 1009258.7579935148 952925.0870003954 946463.724194775 1038096.5511469424 991137.4795819569 773010.515568578 1.2576591999736402 1.1900427709155499 1.0760830552898382 1.4717388339762834 1.3056209943679322 1.232745309162429 1.2243866094093372 1.3429268169571842 1.2821785210165457 1.0 19.56012851427316 -9.700153048173892 13.887259684905661 0.9999922696257597 1.2645203153907287 0.3996525966076454 0.0973710007843766 0.0 0.0 0.09755500914050037 0.02366056511731644 1.994559295553748e-10 9.700153048173892 0.264528045764969 KKEDDMETK ddPTM_KYSE-520_SHP099_60min_R1 1 KKEDDMETK 9 2 Q9Y570;Q9Y570-2 Q9Y570 PPME1 Protein phosphatase methylesterase 1 0 78.655 0.0084478 611060000.0 406570.0 459510.0 258180.0 219030.0 570360.0 620870.0 377910.0 370510.0 412890.0 728000.0 False True 384016.75162279885 437434.44986142777 274822.6959026056 239846.54534622937 615244.087095519 616994.9200299674 416112.8308461763 369224.78728768404 337919.58410988445 721550.4863754286 0.532210508999632 0.6062423324787658 0.380877985798506 0.3324043845511806 0.8526694925896043 0.8550959796719476 0.5766926066898518 0.5117102604176936 0.4683242413255919 1.0 19.460740817033045 -5.756513661842805 24.997905884274076 0.6868488276026553 0.46730901479522974 0.32888253325615313 0.17135126417652477 179.63983376042296 911662.3539657859 0.054517802385651494 0.06815574043498307 1.7518073257654534e-06 5.756513661842805 -0.21953981280742557 KKEEEATEWQHK ddPTM_KYSE-520_SHP099_60min_R1 2 KKEEEATEWQHK 12 2 A0A2R8Y7M3;A0A2R8Y5S7;P35241;P35241-5;P35241-4;P35241-2 A0A2R8Y7M3 RDX Radixin 0 ; 171.29 1.3432e-06 2131740000.0 2740100.0 2598780.0 2102010.0 1970610.0 2753800.0 2621500.0 2387020.0 2524840.0 2734000.0 1746330.0 False True 2588101.190746074 2473930.707951692 2237508.9279349116 2157896.181914502 2970508.3930213214 2605138.2461039503 2628323.276670208 2516081.9193420834 2237574.5185313867 1730858.8748241826 1.4952699081309957 1.429308156739809 1.2927159807654414 1.2467198876244008 1.7162048484877543 1.505113030297502 1.518508131945297 1.4536609286517725 1.2927538755917782 1.0 20.72305666901929 -8.089113077594753 2.4941012718272635 1.000626671054078 1.456410958275668 0.5725662141993086 0.12128572378611041 0.30761819299615856 4.225844504652141 0.12542400768320616 0.034054694311747215 8.144921864408613e-09 8.089113077594753 0.4557842872215898 KKEEEDDDMKELENWAGSM ddPTM_KYSE-520_SHP099_60min_R1 5 KKEEEDDDMKELENWAGSM 19 3 Q9H444 Q9H444 CHMP4B Charged multivesicular body protein 4b 0 ;;;; 182.7 6.0949e-10 3915790000.0 4300350.0 3797170.0 2424600.0 2492870.0 3571920.0 3654050.0 3010350.0 3402430.0 3336330.0 3040980.0 False True 4061801.0129648107 3614748.253531631 2580893.5954971663 2729791.615291305 3853009.7825552733 3631243.7185489777 3314665.556184767 3390627.764463133 2730536.574035047 3014039.2830466414 1.3476270982304763 1.199303630136427 0.8562906296590653 0.905692115774943 1.2783542020263872 1.204776506721059 1.0997419890407822 1.124944782085199 0.9059392786928029 1.0 21.523266789540354 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE ddPTM_KYSE-520_SHP099_60min_R1 2 KKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 32 2 P09429 P09429 HMGB1 High mobility group protein B1 0 ; 144.49 1.0126e-06 6557300000.0 1838870.0 1956820.0 2262460.0 1190720.0 1891750.0 1721950.0 1902140.0 1790020.0 2768100.0 1910700.0 False True 1736864.2154035342 1862811.4299533 2408301.7916639918 1303885.670796978 2040619.9624148766 1711202.671325078 2094426.8742974394 1783810.838413808 2265482.818122435 1893772.6845021069 0.9171450352079477 0.9836510185186523 1.2716952839021227 0.6885122388064139 1.0775421882016307 0.9035945471855676 1.1059547386216981 0.9419350342371164 1.1962802276441402 1.0 20.85283173929468 -6.773747816302608 24.990053803803562 1.056203735843389 0.979446429773965 0.07335553255794125 0.15087754292282027 767.1721552301432 1557590.5879195593 0.06076134304991949 0.0412996519225254 1.6836514305980977e-07 6.773747816302608 -0.07675730606942388 KKEEKEDEISLEDLIER ddPTM_KYSE-520_SHP099_60min_R1 4 KKEEKEDEISLEDLIER 17 3 Q8WU90;Q8WU90-2 Q8WU90 ZC3H15 Zinc finger CCCH domain-containing protein 15 0 ;;; 209.7 3.4123e-18 1695970000.0 2592580.0 2332820.0 2010250.0 1996220.0 2202440.0 2004140.0 1907460.0 2216290.0 2373850.0 1492180.0 False True 2448764.4192199 2220747.8255657917 2139833.9315137216 2185940.1486145747 2375759.497830591 1991631.4188620117 2100284.6718156366 2208602.207275974 1942818.6798887125 1478960.4460984734 1.6557335428948006 1.5015599852072907 1.4468500068129917 1.4780247533875077 1.606371221149214 1.3466427882611562 1.4201087509515407 1.4933477180558208 1.313638025285873 1.0 20.496152038271873 -12.301539221919478 0.17193480940240127 3.297986449735144e-12 1.6069312443191144 0.8057702745091538 0.07622338791879263 29.26021917567667 0.4723899767947931 10.72932302528603 0.29199071912816776 4.994140751838951e-13 12.301539221919478 1.6069312443158164 KKEEPSQNDIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 14 KKEEPSQNDISPK 13 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPS(0.055)QNDIS(0.945)PK;KKEEPSQNDIS(1)PK;KKEEPS(0.009)QNDIS(0.991)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK;KKEEPSQNDIS(1)PK 252.12 2.9053e-15 255916300000.0 61842103.0 55519790.0 53446048.0 52142281.0 51386412.0 52014178.0 52144337.0 54529968.0 60726260.0 55040478.0 True False 58411598.26741404 52852535.95149623 56891265.77078029 57097867.70909161 55430230.275710516 51689538.22142238 57415595.463647455 54340816.268398196 49699901.968438864 54552862.18576386 1.070733888691493 0.9688315852525269 1.0428649110481807 1.0466520989249195 1.016082897483161 0.9475128554283502 1.0524763167904077 0.9961130193931237 0.9110411438945283 1.0 25.70115155558869 -6.815908716257115 0.7560313794364458 0.9684299984702756 1.027657157087558 0.21820224487097628 0.04278167355737912 1.1561621173899992 1.287966270248197 0.03637192748692738 0.021779688353609983 1.527887168932982e-07 6.815908716257115 0.05922715861728234 KKEEREEIEK ddPTM_KYSE-520_SHP099_60min_R1 2 KKEEREEIEK 10 3 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;E9PK58;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 0 ; 141.73 0.00011608 159886000.0 405230.0 486410.0 412160.0 226010.0 374200.0 372260.0 199878.0 251380.0 561740.0 215000.0 False True 382751.0840940222 463042.13348370534 438728.4930793166 247489.92244761603 403647.4110932452 369936.5872571646 220083.61886129485 250508.021452533 459742.1763130289 213095.2672674688 1.796150092876573 2.1729348540740374 2.0588373393044055 1.161405063665616 1.8942110553145362 1.7360150321538335 1.0327944946100307 1.1755682078950407 2.157449023661228 1.0 17.70113902642381 -5.241783736290128 24.22282319719464 1.4712882281488417 2.025670305079136 0.31840176611822535 0.37324180125068995 677.1123834756341 834443.6745357842 0.10079783279414259 0.1742344538464177 5.73081334731759e-06 5.241783736290128 0.5543820769302943 KKEGETVEPYK ddPTM_KYSE-520_SHP099_60min_R1 1 KKEGETVEPYK 11 2 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 88.021 0.0021666 952700000.0 1151100.0 1021300.0 781900.0 605480.0 1147300.0 1097100.0 920730.0 944260.0 980740.0 1019400.0 False True 1087246.1883390404 972235.2149974469 832302.5250842343 663024.6371558005 1237585.9827559595 1090252.5919514177 1013806.3738588535 940984.5824519413 802662.3384434789 1010368.9090811989 1.076088326320088 0.9622576528820254 0.8237610219430711 0.6562203480298463 1.2248852588718169 1.0790638767208929 1.0034021878016621 0.9313277298958519 0.7944250176634964 1.0 19.946450719852365 -4.286372117938468 4.708311038244518 0.9412683719542846 1.0815804678606298 0.06894434565753504 0.149530323425289 0.5373336389136963 30.751492213899013 0.03996898501769921 0.2312219324671137 5.171635191727925e-05 4.286372117938468 0.1403120959063452 KKEHGS(ph)LPQQTTLLDLMDALPSSGPAAQK ddPTM_KYSE-520_SHP099_60min_R1 1 KKEHGSLPQQTTLLDLMDALPSSGPAAQK 29 2 O95208-5;O95208-3;O95208-2;O95208;F6PQP6;E9PBC1 O95208-5 EPN2 Epsin-2 1 KKEHGS(0.333)LPQQT(0.333)T(0.333)LLDLMDALPSSGPAAQK 72.425 0.01324 436260000.0 259480.0 257510.0 218200.0 203680.0 205920.0 162680.0 165180.0 152540.0 233470.0 177100.0 True False 245086.1271394443 245138.83306960977 232265.52113234423 223037.6859613751 222124.7324754705 161664.6537769181 181878.00640144845 152010.8743431036 191077.7332997526 175531.0317817149 1.3962552641075225 1.3965555297051808 1.323216292724711 1.2706453308993138 1.2654442363883447 0.9210032672625054 1.0361587039927302 0.8660057016706867 1.088569533034883 1.0 17.4213665786989 -6.1253574387231176 3.0332986022034873 0.9762207986045704 1.3457194890837512 0.8689163241149356 0.06785373565460101 0.08897241177170653 1.5627057108059048 0.023660559027847063 0.023890335871065958 7.492772755083387e-07 6.1253574387231176 0.3694986904791807 KKEIQNGNLHES(ph)DSESVPR ddPTM_KYSE-520_SHP099_60min_R1 2 KKEIQNGNLHESDSESVPR 19 2 Q86UP2-2;Q86UP2-3;Q86UP2-4;Q86UP2 Q86UP2-2 KTN1 Kinectin 1 KKEIQNGNLHES(0.908)DS(0.091)ESVPR;KKEIQNGNLHES(0.997)DS(0.003)ESVPR 88.329 0.00073137 2108990000.0 438110.0 606760.0 599090.0 836850.0 524930.0 534690.0 491640.0 520510.0 846760.0 383630.0 True False 413807.16494936775 577610.3388346726 637708.2999778921 916383.9723918732 566239.0045568607 531352.8013768145 541339.7691440126 518704.47229794745 693009.7290825307 380231.33665962354 1.0883036852898864 1.519102407258293 1.6771587149555678 2.410069565655511 1.4891960497820513 1.3974461075323528 1.4237116117249708 1.3641812819922379 1.8226002495499232 1.0 18.536517910632725 -5.978710842371232 24.9998778960724 1.4276859106468167 1.698714223961156 0.11279365150029119 0.35428634526576275 563.9450989647687 662238.0635468144 0.11382701287614264 0.1290565637149726 1.0502414572288266e-06 5.978710842371232 0.2710283133143392 KKEPAITSQNS(ph)PEAR ddPTM_KYSE-520_SHP099_60min_R1 17 KKEPAITSQNSPEAR 15 2 E5RIS7;A0A1W2PRL9;A0A1W2PPZ5;P23193-2;P23193 E5RIS7 TCEA1 Transcription elongation factor A protein 1 1 KKEPAIT(0.001)S(0.004)QNS(0.995)PEAR;KKEPAIT(0.002)S(0.029)QNS(0.969)PEAR;KKEPAITS(0.002)QNS(0.998)PEAR;KKEPAITS(0.009)QNS(0.991)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITS(0.001)QNS(0.999)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR;KKEPAITSQNS(1)PEAR 342.81 1.1937999999999998e-54 254513650000.0 67895350.0 60829620.0 60983520.0 57809500.0 56181560.0 57443630.0 57942940.0 59977510.0 69549410.0 54372130.0 True False 64129059.58947535 57907273.74807888 64914615.27628189 63303697.49894002 60602729.14265047 57085102.99753736 63800377.84379919 59769462.01666614 56920990.34195032 53890435.22907704 1.189989639476394 1.0745371326456559 1.2045665432157553 1.174674081399587 1.1245544572991637 1.0592807936117132 1.1838905656003156 1.1090922120520752 1.0562354915114531 1.0 25.68352590245702 -7.865612048884533 1.990254134519786 1.00138411780365 1.1417908297016595 0.5157723752141228 0.045856853909130614 0.24969490899098112 2.0724025601353575 0.04334151169428973 0.012351692211817972 1.362661391362508e-08 7.865612048884533 0.14040671189800946 KKEPPRAS(ph)PPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAET(ph)PEGR ddPTM_KYSE-520_SHP099_60min_R1 1 KKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR 47 3 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 2 KKEPPRAS(0.996)PPGGLAEPPGS(0.004)AGPQAGPTVVPGSATPMETGIAET(1)PEGR 158.69 2.7417e-12 1236800000.0 194340.0 134730.0 110600.0 117320.0 139610.0 123070.0 97324.0 132780.0 120240.0 97927.0 True False 183559.57279281475 128257.3685661471 117729.45296625693 128470.05752645574 150596.5127277604 122301.87447950148 107162.45971070699 132319.41717108485 98407.44700373602 97059.44296605319 1.891207771066801 1.3214311214520926 1.2129623802542646 1.3236224482700616 1.5515905317984562 1.2600718770071337 1.1040910233555261 1.3632822642240376 1.0138884378118087 1.0 16.56658095990276 -4.262247083812363 3.7522878678577114 1.253522970412265 1.9572735927586264 0.6050419331410715 0.1586251459122739 0.18122797186539133 4.89898465232154 0.039818612025675965 0.35409740725298233 5.467048367931132e-05 4.262247083812363 0.7037506223463614 KKEPPRAS(ph)PPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR ddPTM_KYSE-520_SHP099_60min_R1 6 KKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR 47 3 R4GMQ1;O60341;O60341-2 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 KKEPPRAS(0.992)PPGGLAEPPGS(0.007)AGPQAGPTVVPGSATPMETGIAETPEGR;KKEPPRAS(0.996)PPGGLAEPPGS(0.004)AGPQAGPTVVPGSATPMETGIAETPEGR;KKEPPRAS(1)PPGGLAEPPGSAGPQAGPTVVPGSATPMETGIAETPEGR;KKEPPRAS(0.911)PPGGLAEPPGS(0.085)AGPQAGPT(0.003)VVPGSATPMETGIAETPEGR;KKEPPRAS(0.995)PPGGLAEPPGS(0.005)AGPQAGPTVVPGSATPMETGIAETPEGR;KKEPPRAS(0.997)PPGGLAEPPGS(0.003)AGPQAGPTVVPGSATPMETGIAETPEGR 131.57 9.347099999999999e-08 26350110000.0 1978390.0 1765720.0 1846470.0 1455030.0 1520110.0 1710930.0 1508000.0 1634050.0 2229760.0 1645560.0 True False 1868644.7628773092 1680892.1608002458 1965496.410656456 1593315.6137292797 1639734.0087572236 1700251.4512327423 1660443.356661729 1628381.8619401373 1824891.7916754012 1630981.618626307 1.1457178557604921 1.0306015356665859 1.205100283295586 0.9769059292472275 1.0053663327844788 1.0424712527813635 1.0180638075248427 0.9984060171761107 1.118891697389217 1.0 20.637309092105973 -5.277908418327216 24.987236198173992 1.0226926058727066 1.1174860671049933 0.4358382591969032 0.05402824551377813 771.5259195258299 1170576.2047959063 0.014540325813942866 0.0216308270146724 5.2734105252935996e-06 5.277908418327216 0.09479346123228671 KKEQSEVS(ph)VS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 KKEQSEVSVSPR 12 2 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 2 KKEQS(0.211)EVS(0.79)VS(0.998)PR 53.395 0.053276 568640000.0 1033400.0 930530.0 790740.0 847430.0 855770.0 940230.0 803510.0 830080.0 1179500.0 753580.0 True False 976075.2419681738 885825.9420459947 841712.3656287332 927969.4924108802 923114.2303347575 934361.6758093896 884736.6323019003 827200.6462221281 965332.5327753385 746903.8674763684 1.3068284748158119 1.185997262323751 1.126935342392459 1.2424215924149575 1.235921074359632 1.2509798335445788 1.1845388286597576 1.1075061761523148 1.2924454870437272 1.0 19.510563042966744 -10.893803295189164 2.5464003483654847 0.887415236132856 1.2098535983801593 0.5194870038647057 0.061820302452250814 17469451.8543641 9350345.657114571 11789052.227337655 0.015293480797201251 1.277017076633372e-11 10.893803295189164 0.32243836224730327 KKEQSEVS(ph)VSPR ddPTM_KYSE-520_SHP099_60min_R1 1 KKEQSEVSVSPR 12 2 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 KKEQSEVS(0.857)VS(0.143)PR 93.51 0.0014423 877290000.0 752810.0 662210.0 649910.0 612970.0 640120.0 597790.0 606110.0 585980.0 784890.0 600890.0 True False 711050.1286104698 630396.4376025259 691804.2384927672 671226.4845038493 690493.8022154144 594058.9708710585 667381.5138635541 583947.3721487597 642373.7614667525 595566.5820853463 1.1939053499623227 1.0584818835792038 1.1615900879972976 1.1270385288469067 1.1593897693145998 0.9974686101275042 1.1205825409591508 0.980490493781732 1.0785926893639888 1.0 19.183903279377084 -6.254622400578997 24.995857606448894 1.0395297517133386 1.1360181888914986 0.5157107029108032 0.050553373100200194 460.3608160749634 1688011.239568501 0.015733118684599964 0.01538945338452443 5.563878010733525e-07 6.254622400578997 0.09648843717816002 KKEQSEVSVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 KKEQSEVSVSPR 12 2 Q7L4I2;E9PI52 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 KKEQSEVSVS(1)PR;KKEQSEVSVS(1)PR;KKEQSEVS(0.005)VS(0.995)PR;KKEQSEVS(0.001)VS(0.999)PR 178.34 6.760600000000001e-07 2017850000.0 3342890.0 2983170.0 2889500.0 2712870.0 2938230.0 2740350.0 2494460.0 2725500.0 3715730.0 2637060.0 True False 3157453.2278139964 2839854.0353705366 3075761.7933634617 2970700.3491458916 3169451.9847581685 2723246.459168782 2746624.360383562 2716045.8766364823 3041047.097930736 2613697.7000016365 1.2080407109865916 1.0865273498801176 1.1767855912952503 1.1365891124838314 1.2126314319962037 1.0419133242406253 1.0508577026263757 1.0391583834024807 1.1635037586515196 1.0 21.317660858151203 -6.274252490079807 24.97813224330964 1.0610197203089236 1.158979147604787 0.5083486887666406 0.05150327943219897 676.2185645199665 1318230.7083991107 0.01736673569915471 0.015417850280613028 5.317989921330406e-07 6.274252490079807 0.09795942729586349 KKEVDATS(ph)PAPSTSSTVK ddPTM_KYSE-520_SHP099_60min_R1 1 KKEVDATSPAPSTSSTVK 18 2 Q16666-3;Q16666-2;Q16666;H3BM18;X6RHM1;Q16666-6 Q16666-3 IFI16 Gamma-interferon-inducible protein 16 1 KKEVDAT(0.098)S(0.902)PAPSTSSTVK 110.4 7.868e-05 701750000.0 761100.0 638590.0 765460.0 532110.0 784170.0 659520.0 538640.0 628900.0 873340.0 679540.0 True False 718880.2657847651 607911.1778568679 814802.7763793034 582681.5744152947 845879.7176830312 655403.691043478 593090.9878198097 626718.4926863642 714763.4711098039 673519.8042741199 1.0673483707870062 0.9025884227889021 1.2097681036379473 0.8651290885845215 1.2559091986829856 0.9731023303016807 0.8805843333129727 0.9305123453078037 1.0612360120280857 1.0 19.361360841962544 -6.494273804660703 24.99109093614377 0.9572282983285384 1.0554363296199267 0.12363193049112797 0.11956753553216123 1412.5527658557892 1234097.8958282191 0.04005817325700248 0.035256034725819896 3.204248541736747e-07 6.494273804660703 0.09820803129138833 KKEY(ph)MDS(ph)LEK ddPTM_KYSE-520_SHP099_60min_R1 1 KKEYMDSLEK 10 2 Q70SY1-2;Q70SY1 Q70SY1-2 CREB3L2 Cyclic AMP-responsive element-binding protein 3-like protein 2;Processed cyclic AMP-responsive element-binding protein 3-like protein 2 2 KKEY(1)MDS(1)LEK 42.031000000000006 0.050331 0.0 188730.0 192260.0 259090.0 192160.0 189940.0 184520.0 170220.0 201010.0 313750.0 199390.0 True False 178260.77067607228 183023.54101185632 275791.35595865705 210422.82862498908 204887.19738923278 183368.34223578137 187427.49878710846 200312.74322608687 256780.90899386347 197623.5597230724 0.9020218587594871 0.9261220740499012 1.3955388534905468 1.0647659060481056 1.0367549176643658 0.9278668114911669 0.9484066527783855 1.013607605827882 1.299343607380049 1.0 17.592395422723417 -11.086827664021996 2.505658195987338 0.9099088597763899 1.0545984600674063 0.011607012415680185 0.15664161998732562 26035884.374112565 11920092.23674958 13391453.564561369 0.03983271836638795 8.187896343511192e-12 11.086827664021996 0.1446896002910164 KKFHS(ph)S(ph)DS(ph)EEEEHKK ddPTM_KYSE-520_SHP099_60min_R1 1 KKFHSSDSEEEEHKK 15 3 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 3 KKFHS(1)S(1)DS(1)EEEEHKK 85.80799999999999 0.0014093 757000000.0 1036700.0 790070.0 984040.0 1009900.0 822850.0 777710.0 827390.0 928660.0 1228800.0 409470.0 True False 979192.1843897857 752113.8512807535 1047472.7929196688 1105880.5923624942 887603.6136239362 772856.0234131231 911030.6557482416 925438.6952108741 1005680.8955272022 405842.4143628394 2.412739895427363 1.8532164817261645 2.580984036782282 2.724901472160553 2.187064688685749 1.9043254131692573 2.244789168176354 2.280290729749835 2.4780083597375877 1.0 18.630560122659283 -10.18406814283029 4.341588513711715 0.9996887222538602 2.287486256556498 0.6907208571105194 0.2601580182698896 93213488.72951384 238.629827447939 344053.50090153055 0.06615811404900614 6.545334666553891e-11 10.18406814283029 1.287797534302638 KKGDDS(ph)DEEDLCISNK ddPTM_KYSE-520_SHP099_60min_R1 11 KKGDDSDEEDLCISNK 16 2 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 KKGDDS(0.871)DEEDLCIS(0.129)NK;KKGDDS(1)DEEDLCISNK;KKGDDS(1)DEEDLCISNK;KKGDDS(1)DEEDLCISNK;KKGDDS(1)DEEDLCISNK;KKGDDS(1)DEEDLCISNK;KKGDDS(1)DEEDLCISNK;KKGDDS(1)DEEDLCISNK;KKGDDS(1)DEEDLCISNK;KKGDDS(1)DEEDLCISNK;KKGDDS(1)DEEDLCISNK 266.18 1.3207e-29 38158980000.0 14559960.0 13403910.0 13217410.0 12962590.0 14087640.0 12497870.0 12888310.0 13878530.0 16804840.0 13395280.0 True False 13752289.994239332 12759966.043920916 14069425.397203747 14194550.656255212 15196257.120292997 12419866.1574805 14191186.152584165 13830388.618703254 13753504.67154243 13276608.240570147 1.0358285599039982 0.9610862814291307 1.0597153386066587 1.069139828414915 1.1445888019695318 0.9354698076823833 1.0688864125115394 1.04171098281268 1.035920049935269 1.0 23.662383294368087 -4.781126661665113 24.918858547396983 1.047360344317885 0.9984573922405598 0.10491410613287377 0.05316223858069397 427.9026598518173 541611.2155021514 0.013729349868410616 0.02864439391507417 1.6552871297941985e-05 4.781126661665113 -0.04890295207732509 KKGEMTAEER ddPTM_KYSE-520_SHP099_60min_R1 2 KKGEMTAEER 10 2 Q96GQ7;B7Z6D5 Q96GQ7 DDX27 Probable ATP-dependent RNA helicase DDX27 0 ; 148.28 0.00011455 65058000.0 262250.0 254370.0 166594.0 158638.0 268640.0 263840.0 184302.0 253590.0 242070.0 220488.0 False True 247702.46971758603 242149.683382846 177332.91579982443 173714.90782374606 289780.43964748643 262193.27669352095 202933.04477418427 252710.35547835124 198116.1900881104 218534.64785706808 1.133470011032736 1.1080608304328166 0.8114636170453323 0.7949078534098802 1.326016000158549 1.1997789790523636 0.9286081029444448 1.156385762882029 0.9065664965753517 1.0 17.737502506239526 -4.548829227392442 24.99020213708279 1.0232133996657886 1.1271184295894083 0.06305014218881733 0.16146112739275517 632.8461335483618 609426.1689181593 0.043690035495771516 0.11559908513329173 2.8259909882915806e-05 4.548829227392442 0.10390502992361972 KKGFNGCDS(ph)PEPDGEDS(ph)LEQSPLLEDK ddPTM_KYSE-520_SHP099_60min_R1 1 KKGFNGCDSPEPDGEDSLEQSPLLEDK 27 2 Q14814-4;Q14814;Q05BX2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 2 KKGFNGCDS(1)PEPDGEDS(0.999)LEQS(0.001)PLLEDK 114.23 0.00024173 490490000.0 479330.0 420010.0 472830.0 463570.0 485880.0 418060.0 390330.0 441060.0 572520.0 404830.0 True False 452740.6093793351 399832.08915213705 503309.3783547494 507627.5534225973 524115.99172096734 415450.7324685172 429788.3656536953 439530.06580417836 468564.80005471496 401243.5211529742 1.1283437252229864 0.9964823556607683 1.2543738448623138 1.2651358256550245 1.3062291702926911 1.0354079519457873 1.0711409480673917 1.0954197205257985 1.1677815973409187 1.0 18.61411857177845 -6.291397158606758 24.96449963745074 1.0797382055646658 1.18709375231421 0.2927357678397733 0.08999418075264343 1095.2099636155708 912659.6164226341 0.03480649790201109 0.030699855084627824 5.112141207506031e-07 6.291397158606758 0.10735554674954417 KKGFNGCDS(ph)PEPDGEDSLEQSPLLEDK ddPTM_KYSE-520_SHP099_60min_R1 3 KKGFNGCDSPEPDGEDSLEQSPLLEDK 27 2 Q14814-4;Q14814;Q05BX2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 KKGFNGCDS(0.946)PEPDGEDS(0.054)LEQSPLLEDK;KKGFNGCDS(0.994)PEPDGEDS(0.005)LEQS(0.001)PLLEDK;KKGFNGCDS(1)PEPDGEDSLEQSPLLEDK 84.073 0.0051884999999999995 2855160000.0 558620.0 530160.0 516680.0 437110.0 543470.0 562190.0 437335.0 537360.0 639830.0 512360.0 True False 527632.2350186376 504690.3178136168 549986.0195172295 478652.80297808675 586237.9970786904 558681.1636762079 481545.0897782872 535496.0235807669 523653.000801733 507820.8890100485 1.0390124676580548 0.993835284715179 1.0830315007115565 0.9425622563718828 1.154418831059725 1.100153963271001 0.948257742443436 1.0544978262408005 1.0311765666484256 1.0 18.95396021532883 -3.163744241191945 16.162202171899036 1.0365999089493658 1.0389197104250407 0.0 0.06344104536684428 0.0 0.0 0.014229304293887135 0.0 0.0006858920337599388 3.163744241191945 0.0023198014756748986 KKGVEPSPS(ph)PIKPGDIK ddPTM_KYSE-520_SHP099_60min_R1 1 KKGVEPSPSPIKPGDIK 17 3 Q92890;Q92890-1;Q92890-3;C9JNP9 Q92890 UFD1L Ubiquitin fusion degradation protein 1 homolog 1 KKGVEPS(0.032)PS(0.968)PIKPGDIK 117.31 0.00015686 1526800000.0 755450.0 665790.0 645780.0 587690.0 580080.0 489050.0 526150.0 485270.0 655930.0 465210.0 True False 713543.6825477603 633804.4490288354 687408.0120845333 643543.8809045593 625728.9957962845 485997.6575461129 579338.376729157 483586.711632869 536829.6466497047 461088.6013279035 1.5475196751617877 1.3745827747715345 1.4908371408550232 1.3957054653947139 1.3570688886999764 1.0540222771642436 1.256457815397523 1.0487934645102317 1.1642657075097327 1.0 18.814684475448043 -6.080970489905456 2.5719398056318847 1.115381151261786 1.4505840671918568 0.8040493881346642 0.08161546817128915 0.12239113157480037 1.592438541984591 0.027388797219301923 0.0283762805337099 8.299071573781039e-07 6.080970489905456 0.3352029159300709 KKKEEEATEWQHK ddPTM_KYSE-520_SHP099_60min_R1 2 KKKEEEATEWQHK 13 3 A0A2R8Y7M3;A0A2R8Y5S7;P35241;P35241-5;P35241-4;P35241-2 A0A2R8Y7M3 RDX Radixin 0 ; 177.54 2.8219e-07 4784700000.0 6937500.0 8073200.0 7578000.0 6292300.0 4789000.0 5813600.0 4632200.0 5298500.0 9144100.0 2931200.0 False True 6552663.045436621 7685351.353879744 8066490.0052286945 6890318.300151021 5165867.054317349 5777315.165954581 5100467.981915418 5280120.740179194 7483761.944002511 2905231.8484390927 2.255469920225885 2.6453487207944826 2.776539163152371 2.371693090123948 1.7781255761370087 1.9885900566106578 1.7556147832593016 1.8174524497988238 2.5759603138122507 1.0 21.470221870043932 -5.642068454330197 4.23402654650212 1.8660485507221714 2.569028470030338 0.44544726944874224 0.38000453321694094 0.20665553000202036 6.594713890454347 0.10986629161208061 0.1434873782892708 2.2799826684298603e-06 5.642068454330197 0.7029799193081667 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE ddPTM_KYSE-520_SHP099_60min_R1 2 KKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE 33 3 P09429 P09429 HMGB1 High mobility group protein B1 0 ; 299.36 1.3267999999999998e-53 41278330000.0 1716870.0 2238250.0 2755610.0 1463883.0 1694660.0 2004460.0 1824944.0 1742883.0 3048520.0 1833540.0 False True 1621631.798604506 2130721.1103182584 2933241.029731892 1603010.0001875272 1828020.1007035775 1991949.421623317 2009427.1492570834 1736837.3456649499 2494985.61493537 1817296.2620725348 0.8923321048132883 1.1724676679234889 1.6140687079753735 0.8820851248323017 1.005900985356572 1.0961060467661994 1.1057234811925674 0.9557260320803028 1.3729107724515786 1.0 20.793362201324125 -11.236263016490238 2.327195448896485 0.5695634640465058 1.12129531305916 0.028255129400589496 0.21447756573787774 13752052.160818787 2602144.663731116 31284042.476514593 0.053452317122220795 5.804128027064804e-12 11.236263016490238 0.5517318490126543 KKKPDS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 1 KKKPDSPPK 9 3 Q96T23-3;Q96T23-2;Q96T23;H0YCN2 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KKKPDS(1)PPK 77.062 0.018991 2059700000.0 3320300.0 4045700.0 1215700.0 1732500.0 3236200.0 4998800.0 1604900.0 2212900.0 1578600.0 3040000.0 True False 3136116.3401460494 3851338.499280499 1294065.967188773 1897156.2791048833 3490870.5285407812 4967600.634989292 1767138.9543145956 2205223.9663947416 1291966.0332676126 3013067.965084213 1.0408382341479634 1.2782116247991295 0.42948449294359176 0.6296427100514672 1.1585767626198282 1.6486852246794412 0.5864915676620674 0.7318865661011092 0.4287875508415567 1.0 21.5228017851653 KKLEEER ddPTM_KYSE-520_SHP099_60min_R1 3 KKLEEER 7 2 Q15637-5;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;A0A0J9YY76;H0Y7L4;A0A2R8YG57;A0A0J9YWQ8;A0A0A0MSQ4;B1AK53-2;B1AK53;Q15637-6 Q15637-5;Q15637-6 SF1;ESPN Splicing factor 1;Espin 0 ;; 122.52 0.0016 3707470000.0 6336610.0 5828790.0 3114240.0 2904870.0 7152000.0 6537820.0 4439480.0 5180950.0 4617760.0 5069960.0 False True 5985105.611581136 5548766.17920784 3314988.893360181 3180947.9714189866 7714821.710686503 6497015.040298815 4888265.963549478 5162978.493692826 3779291.1882565846 5025044.098769193 1.1910553407973266 1.1042223849472137 0.6596934928734529 0.6330189166296294 1.5352744292485174 1.2929269699125943 0.9727807094761186 1.0274493899381734 0.7520911486492753 1.0 22.260704826470757 -7.621433488479731 8.38005143436222 0.8769366270190384 1.049751869912928 0.06845287921342746 0.2608249019559575 0.8331123404867368 62.886860037591845 0.1932996848067537 0.07236397635825113 2.390928074200081e-08 7.621433488479731 0.1728152428938896 KKLEFGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KKLEFGSPK 9 2 Q8WYL5-4;Q8WYL5;Q8WYL5-2;Q8WYL5-5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 KKLEFGS(1)PK;KKLEFGS(1)PK 102.87 0.0015464 5022900000.0 7402800.0 6466300.0 6182200.0 5947500.0 6413200.0 6127300.0 5537600.0 6287200.0 7199300.0 5712900.0 True False 6992151.926884059 6155649.241885823 6580714.503869737 6512748.611818922 6917882.353883484 6089057.24789347 6097394.649767896 6265391.170643513 5892088.599584133 5662288.150568945 1.2348633169051082 1.0871310463539912 1.1622005678408487 1.1501973122234201 1.2217467867982623 1.075370430818086 1.0768428747581897 1.106512244526794 1.040584379124559 1.0 22.43295373835218 -7.300027999022522 0.5613087151679965 1.0019895456852497 1.168975300957726 0.5937135438466569 0.04590374204757689 0.596766334583226 0.41255858939554174 0.045449956278753 0.02691759534973236 5.011549230617698e-08 7.300027999022522 0.16698575527247628 KKLELDGEKETAPEEPGS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 1 KKLELDGEKETAPEEPGSPAK 21 3 P35612 P35612 ADD2 Beta-adducin 1 KKLELDGEKET(0.003)APEEPGS(0.997)PAK 48.867 0.054030999999999996 537770000.0 928460.0 877030.0 791790.0 796480.0 762340.0 800610.0 706140.0 739920.0 956970.0 671930.0 True False 876956.4729608758 834896.1623511321 842830.0503087927 872177.2197295554 822331.8208787407 795613.0960187997 777523.5224622771 737353.3902186255 783208.371250543 665977.2229536301 1.316796495038593 1.2536407155913547 1.265553867699581 1.3096201937078595 1.2347746927915537 1.1946551152158482 1.167492664409656 1.107175087683089 1.1760287653337287 1.0 19.34511331105202 -7.40595908105685 0.3058184952188163 0.979947469242138 1.3285826317035723 0.8844305825735206 0.031204104546974726 0.47966044735159613 0.1586170474541843 0.059547844672840716 0.05647391785962585 3.926819318924773e-08 7.40595908105685 0.3486351624614342 KKLEMDLK ddPTM_KYSE-520_SHP099_60min_R1 1 KKLEMDLK 8 2 P35579;P35579-2 P35579 MYH9 Myosin-9 0 84.213 0.0063663 0.0 760990.0 686630.0 458740.0 437090.0 787420.0 663950.0 440230.0 591250.0 582260.0 588790.0 False True 718776.3677040453 653643.2641473573 488311.1144099513 478630.90218409937 849385.4741930595 659806.0417702522 484732.7446307643 589199.0917487867 476536.261580134 583573.7786716883 1.2316803701154988 1.1200696262178862 0.8367598618317451 0.8201720496653285 1.4554894432138523 1.1306300349410512 0.8306280411263461 1.0096394205543344 0.8165827166957542 1.0 19.154555535502436 -6.752297181985805 24.99604027114606 0.9150158239635092 1.0916770671485665 0.20047421148544364 0.1805458255578146 368.53570108661927 1007630.1126277884 0.07456803666473102 0.05692743487980719 1.7688981104351038e-07 6.752297181985805 0.17666124318505727 KKLGAGEGGEASVS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 4 KKLGAGEGGEASVSPEK 17 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KKLGAGEGGEASVS(1)PEK;KKLGAGEGGEAS(0.002)VS(0.998)PEK;KKLGAGEGGEASVS(1)PEK;KKLGAGEGGEAS(0.003)VS(0.997)PEK 175.42 1.2322e-08 6696500000.0 4064380.0 4130900.0 4134550.0 3324790.0 3417380.0 3457080.0 3083400.0 3049740.0 4757100.0 3487340.0 True False 3838920.739259344 3932445.363392688 4401069.7085139 3640777.0419654357 3686308.3637675964 3435503.0813812884 3395100.163084064 3039161.16375467 3893330.556732135 3456444.8807094684 1.1106558535576498 1.1377138936425093 1.273293762928613 1.0533299872029585 1.0665028637780407 0.9939412315107188 0.9822520769916595 0.8792737244896708 1.1263974086382629 1.0 21.72085748876034 -5.711893203953231 1.8448995325254924 0.9910043001595991 1.1677103806849312 0.49776358569851 0.07269167466088694 0.2696937365452111 1.891568013354584 0.024697516761145923 0.03379697295645457 1.9413632136754444e-06 5.711893203953231 0.1767060805253321 KKLPVDSVFNKFEDEDS(ph)DDVPR ddPTM_KYSE-520_SHP099_60min_R1 1 KKLPVDSVFNKFEDEDSDDVPR 22 3 P49756 P49756 RBM25 RNA-binding protein 25 1 KKLPVDSVFNKFEDEDS(1)DDVPR 230.85 1.0371e-20 673070000.0 397640.0 438820.0 450930.0 378220.0 405650.0 435490.0 342150.0 394580.0 505470.0 363380.0 True False 375582.11652431224 417738.4285177511 479997.6693135099 414165.9150840105 437572.3471672226 432771.945373187 376737.86106220813 393211.29407566437 413689.3898617629 360160.7359053621 1.042818050613386 1.159866656390658 1.3327318096096872 1.1499474367823346 1.2149362868977522 1.2016077884928151 1.0460270193395038 1.0917661334937598 1.1486243463542518 1.0 18.458281384158965 -6.754770246065356 24.996261788091605 1.0792515485903464 1.1892366614943113 0.3402685311226544 0.07589658096628357 191.4457401686893 717550.8182415409 0.030056787413735672 0.02274118798429989 1.7588538507848733e-07 6.754770246065356 0.10998511290396484 KKNEELEQLYQDQEVPKPK ddPTM_KYSE-520_SHP099_60min_R1 1 KKNEELEQLYQDQEVPKPK 19 3 J3QQZ9;Q9NVS9-3;Q9NVS9;J3QQV6;Q9NVS9-4;A0A286YFL3 J3QQZ9 PNPO Pyridoxine-5-phosphate oxidase 0 132.79 3.2607e-06 1142400000.0 903790.0 623510.0 500340.0 488810.0 708200.0 517020.0 430940.0 515600.0 536930.0 429770.0 False True 853654.9670393013 593555.6436924102 532592.7169723057 535266.355433915 763931.3108932023 513793.0864011691 474503.62076910114 513811.5039419451 439437.04690382496 425962.572156 2.004060973522969 1.393445533695934 1.2503274977343657 1.256604195820953 1.7934235560335292 1.2061930319385032 1.1139561355529706 1.2062362694010877 1.0316330016499435 1.0 18.700367145880595 -1.0000000000000002 0.23547932397830884 1.033448851115218 5.338429764493735 0.5461216057635538 0.20873206369211808 45.37090078878247 0.6005182353772215 0.3129286705401774 75.88601324237591 0.09999999999999995 1.0000000000000002 4.304980913378516 KKNMFCS(ph)T(ph)SGT(ph)EQLT(ph)IT(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 1 KKNMFCSTSGTEQLTITGK 19 2 Q5TDP6 Q5TDP6 LGSN Lengsin 5 KKNMFCS(0.98)T(0.513)S(0.513)GT(0.995)EQLT(0.999)IT(1)GK 49.463 0.041858 257720000.0 259570.0 295540.0 269820.0 262690.0 267500.0 288540.0 277210.0 290360.0 344490.0 300700.0 True False 245171.13466003368 281341.8147854159 287213.0289272643 287655.9786193715 288550.7281331991 286739.1148315212 305233.0921088842 289352.8089305333 281939.2998862027 298036.03194105986 0.8226224630064836 0.9439859098682892 0.9636855888084837 0.9651718174675565 0.9681739696167455 0.9620954653168488 1.024148288785591 0.970865190514133 0.9459906510296027 1.0 18.18512723452099 -3.358741625974166 1.126142660859909 0.977198744964894 7.884136086230929e-16 0.8309326909728022 0.020624279667240227 4.171027740956047 0.9521938886511868 0.006380097311850518 7.823028022589367 0.0004377824768316591 3.358741625974166 -0.9771987449648932 KKPAPGPHSS(ph)PPEEK ddPTM_KYSE-520_SHP099_60min_R1 4 KKPAPGPHSSPPEEK 15 2 M0QYC5;O75182-2;O75182 M0QYC5 SIN3B Paired amphipathic helix protein Sin3b 1 KKPAPGPHS(0.186)S(0.814)PPEEK;KKPAPGPHS(0.023)S(0.977)PPEEK;KKPAPGPHS(0.149)S(0.851)PPEEK;KKPAPGPHS(0.035)S(0.965)PPEEK 182.7 7.545299999999999e-10 5310680000.0 6081800.0 5184440.0 5086800.0 5740500.0 5608600.0 5657560.0 5206450.0 5620300.0 6611000.0 4505920.0 True False 5744430.4302322725 4935371.72039691 5414703.267167767 6286075.394055744 6049964.91143125 5622249.069474674 5732768.776055338 5600804.491087877 5410609.04974799 4466001.054352713 1.2862581894452443 1.1050986464919736 1.2124276732739274 1.4075400604594857 1.3546716263165128 1.2589000766121725 1.2836469822298835 1.2540983360559548 1.2115109208213535 1.0 22.090552161082243 -8.328786149927033 1.553381605056791 1.0000877702319257 1.2717162182555148 0.5353177874573876 0.07563948498669873 1.1340713836709506 4.12011144940227 0.0804224286240472 0.023203603407047343 4.690442864454177e-09 8.328786149927033 0.2716284480235891 KKPCSETSQIEDTPSSKPTLLANGGHGVEGS(ph)DT(ph)TGSPTEFLEEK ddPTM_KYSE-520_SHP099_60min_R1 1 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK 44 3 P27816-6;P27816;P27816-2;P27816-5;H7C456 P27816-6 MAP4 Microtubule-associated protein 4 2 KKPCSET(0.001)S(0.001)QIEDT(0.038)PS(0.17)S(0.182)KPT(0.065)LLANGGHGVEGS(0.515)DT(0.7)T(0.183)GS(0.142)PT(0.006)EFLEEK 83.15 0.0006576 1322700000.0 214640.0 184910.0 186470.0 272550.0 192540.0 167640.0 192710.0 237240.0 254250.0 224800.0 True False 202733.49132576794 176026.6460444313 198490.15456254917 298453.0700548547 207691.80259725635 166593.6965770996 212191.0074683565 236417.06981223205 208084.60912092397 222808.44689175367 0.9099003837330337 0.7900357841009044 0.8908556086250222 1.3395051858148412 0.932154078961641 0.7476991958838763 0.9523472311238028 1.0610776795508556 0.9339170575611841 1.0 17.765444402167915 -5.015140974175751 24.699338681367195 0.9932207689340221 0.8475874087376133 0.15715133670894188 0.1417589756422795 1094.4888684746138 1785438.685250418 0.040512303909065926 0.0733688294928008 9.6573734489999e-06 5.015140974175751 -0.14563336019640882 KKPCSETSQIEDTPSSKPTLLANGGHGVEGS(ph)DTTGS(ph)PTEFLEEK ddPTM_KYSE-520_SHP099_60min_R1 2 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK 44 3 P27816-6;P27816;P27816-2;P27816-5;H7C456 P27816-6 MAP4 Microtubule-associated protein 4 2 KKPCSETSQIEDTPSSKPTLLANGGHGVEGS(0.997)DT(0.011)T(0.042)GS(0.802)PT(0.148)EFLEEK;KKPCSETSQIEDTPSSKPTLLANGGHGVEGS(1)DT(0.001)T(0.01)GS(0.838)PT(0.152)EFLEEK 165.36 4.8201e-11 2951180000.0 619360.0 590010.0 534820.0 752170.0 523580.0 536400.0 491970.0 589230.0 656610.0 564950.0 True False 585002.86613645 561665.0339769351 569295.3529422556 823656.0106518427 564782.7672373094 533052.1286325224 541703.1287645032 587186.0986573158 537386.1757911098 559944.9825244495 1.0447506172821297 1.003071822243555 1.0166987306068018 1.4709588198084773 1.0086397500894628 0.9519723281193027 0.9674220605072574 1.0486496298440837 0.9597124584782672 1.0 19.094925556359847 -5.970089988334412 24.99965056901492 0.9866636540230118 1.1316129979094292 0.24137514840323582 0.12599563325168772 324.4857148704396 271213.0811245198 0.040921604210184086 0.0464002136179529 1.071297303226423e-06 5.970089988334412 0.14494934388641734 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDT(ph)TGSPTEFLEEK ddPTM_KYSE-520_SHP099_60min_R1 2 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK 44 3 P27816-6;P27816;P27816-2;P27816-5;H7C456 P27816-6 MAP4 Microtubule-associated protein 4 1 KKPCSETSQIEDTPS(0.002)S(0.002)KPT(0.009)LLANGGHGVEGS(0.05)DT(0.293)T(0.293)GS(0.293)PT(0.056)EFLEEK;KKPCSETSQIEDTPSSKPTLLANGGHGVEGS(0.012)DT(0.329)T(0.329)GS(0.273)PT(0.056)EFLEEK 87.75299999999999 0.0001062 10553800000.0 802670.0 895260.0 723890.0 1375100.0 893780.0 766250.0 872790.0 939640.0 1136450.0 828010.0 True False 758144.2950170242 852250.365787344 770553.1076649522 1505789.0905611082 964115.401087442 761467.549523994 961020.1308095411 936380.6081536256 930099.327573152 820674.4755820321 0.9238063538887805 1.0384755358486297 0.9389266153531419 1.834818963381534 1.1747841924822626 0.9278557725143726 1.1710125749042872 1.14098907181137 1.1333352690340643 1.0 19.64645055808161 -9.720904179253449 13.734258567286272 1.0000097802733714 1.1493786992338508 0.02774098551759341 0.2505622633758928 0.0 0.0 0.25134809396748886 0.06096086707209587 1.9014977714086426e-10 9.720904179253449 0.14936891896047944 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGS(ph)PTEFLEEK ddPTM_KYSE-520_SHP099_60min_R1 8 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK 44 3 P27816-6;P27816;P27816-2;P27816-5;H7C456 P27816-6 MAP4 Microtubule-associated protein 4 1 KKPCSETSQIEDTPSSKPTLLANGGHGVEGS(0.001)DT(0.014)T(0.204)GS(0.648)PT(0.133)EFLEEK;KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTT(0.009)GS(0.987)PT(0.004)EFLEEK;KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTT(0.005)GS(0.956)PT(0.039)EFLEEK;KKPCS(0.002)ET(0.002)S(0.002)QIEDT(0.009)PS(0.014)S(0.014)KPT(0.014)LLANGGHGVEGS(0.011)DT(0.038)T(0.096)GS(0.591)PT(0.208)EFLEEK;KKPCSETSQIEDT(0.036)PS(0.032)S(0.032)KPT(0.217)LLANGGHGVEGS(0.026)DT(0.066)T(0.054)GS(0.396)PT(0.14)EFLEEK;KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDT(0.005)T(0.026)GS(0.946)PT(0.022)EFLEEK;KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDT(0.007)T(0.037)GS(0.953)PT(0.003)EFLEEK;KKPCSETSQIEDTPSSKPTLLANGGHGVEGS(0.005)DT(0.026)T(0.138)GS(0.791)PT(0.039)EFLEEK 170.75 1.9303e-11 48329400000.0 11580990.0 12196060.0 10930580.0 19107300.0 11954050.0 10636840.0 11194480.0 11672370.0 14422640.0 10797390.0 True False 10938569.398568798 11610142.970940735 11635182.67634637 20923252.047180794 12894765.72575951 10570451.53602453 12326127.285996411 11631881.272821648 11803852.141167358 10701733.524842316 1.022130608389445 1.0848843268232848 1.087224107135279 1.9551273631146675 1.2049230805295637 0.9877326427056853 1.1517879096300923 1.08691561472916 1.1029850550629627 1.0 23.35134117533551 -6.005126813533662 24.99926717710947 1.078867909002455 1.298766055491942 0.14998727065740214 0.2486608612424374 486.6624675297255 2373071.5094315833 0.08350072683986735 0.09206468331859581 9.882644803286954e-07 6.005126813533662 0.2198981464894869 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPT(ph)EFLEEK ddPTM_KYSE-520_SHP099_60min_R1 1 KKPCSETSQIEDTPSSKPTLLANGGHGVEGSDTTGSPTEFLEEK 44 3 P27816-6;P27816;P27816-2;P27816-5;H7C456 P27816-6 MAP4 Microtubule-associated protein 4 1 KKPCSETSQIEDTPSSKPTLLANGGHGVEGS(0.003)DT(0.015)T(0.079)GS(0.405)PT(0.497)EFLEEK 54.856 0.025970999999999998 1674500000.0 67705.0 85476.0 83405.0 151300.0 80975.0 43446.0 82316.0 87009.0 130860.0 87115.0 True False 63949.26868342865 81369.60465790829 88781.41975271839 165679.5065099964 87347.27181527407 43174.837398524585 90637.30460674189 86707.1860870532 107099.12271214984 86343.22887444445 0.7406402275784721 0.9423970555494452 1.0282383564994937 1.9188477043280183 1.0116285081519205 0.5000373273196332 1.0497326285833213 1.004215237458145 1.2403882054015776 1.0 16.397795424098266 -5.985342166231345 24.998796262260885 0.9415961424930404 1.1744674508564776 0.07141136651713531 0.3347871238873536 642.921218290901 1096489.7045022778 0.1107072465870514 0.12548367701067348 1.0343269336567923e-06 5.985342166231345 0.23287130836343728 KKPDS(ph)PPKVLEPENK ddPTM_KYSE-520_SHP099_60min_R1 2 KKPDSPPKVLEPENK 15 3 Q96T23-3;Q96T23-2;Q96T23;H0YCN2 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KKPDS(1)PPKVLEPENK;KKPDS(1)PPKVLEPENK 155.28 2.8095e-06 3099100000.0 1614460.0 1594220.0 1634650.0 1181030.0 1403770.0 1444430.0 1137320.0 1206710.0 1946120.0 1331880.0 True False 1524902.6854537786 1517631.2782269935 1740022.154532477 1293274.7361103839 1514238.7126412727 1435414.7765858974 1252291.4047735515 1202524.2046582312 1592753.6656928707 1320080.5793869593 1.1551587905049994 1.1496504849209856 1.3181181374098672 0.9796937825651341 1.1470805163609632 1.087369058374072 0.9486476994874897 0.9109475765613332 1.2065579106031086 1.0 20.332194565524436 -5.694106447137918 1.1222015651888229 1.0209520143129815 1.193341451730856 0.2813757678512975 0.1034767959949462 0.6346163014555215 1.6851245277458402 0.043291681199606774 0.06970666764453622 2.0225233901711994e-06 5.694106447137918 0.1723894374178745 KKPEDS(ph)PSDDDVLIVYELTPTAEQK ddPTM_KYSE-520_SHP099_60min_R1 6 KKPEDSPSDDDVLIVYELTPTAEQK 25 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KKPEDS(0.534)PS(0.401)DDDVLIVY(0.052)ELT(0.011)PT(0.002)AEQK;KKPEDS(0.702)PS(0.298)DDDVLIVYELTPTAEQK;KKPEDS(0.812)PS(0.188)DDDVLIVYELTPTAEQK;KKPEDS(0.499)PS(0.499)DDDVLIVY(0.002)ELTPTAEQK;KKPEDS(0.5)PS(0.5)DDDVLIVYELTPTAEQK;KKPEDS(0.857)PS(0.143)DDDVLIVYELTPTAEQK 172.0 1.3148e-10 5551674000.0 2731836.0 2623459.0 2382973.0 2645058.0 2266039.0 2179349.0 2451150.0 2530187.0 3172342.0 2324933.0 True False 2580295.6112999506 2497424.091747758 2536583.252471607 2896443.5170543166 2444363.37730178 2165746.874502536 2698936.162918695 2521410.3718470824 2596324.661033979 2304335.9023905033 1.1197567197660585 1.083793421417835 1.100787107400519 1.2569536906705159 1.0607669544904512 0.939857280466708 1.1712425085764777 1.0942026156999887 1.126712758474391 1.0 21.135919602680328 KKPEDSPS(ph)DDDVLIVYELTPTAEQK ddPTM_KYSE-520_SHP099_60min_R1 2 KKPEDSPSDDDVLIVYELTPTAEQK 25 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KKPEDS(0.419)PS(0.581)DDDVLIVYELTPTAEQK;KKPEDS(0.298)PS(0.702)DDDVLIVYELTPTAEQK 176.84 9.0457e-11 830410000.0 748890.0 756090.0 735670.0 770430.0 676480.0 656710.0 660050.0 649970.0 847740.0 635380.0 True False 707347.5788247975 719766.3014857733 783092.4653136189 843651.4355617745 729715.1273553132 652611.2292957945 726774.2954672236 647715.4057741377 693811.7857863207 629751.0275181601 1.1232178240541255 1.1429378755003579 1.2434953356087013 1.33965868842897 1.1587359058882527 1.0363003802752433 1.1540660732725294 1.0285261594995327 1.1017239440174051 1.0 19.26442204533701 -6.032800132980608 7.10762210891837 1.0738896698493798 1.214452531564679 0.5153096409287108 0.06791052293759581 0.1947089170954306 33.460795693814674 0.02334723144392539 0.02394589615108005 9.272564586553973e-07 6.032800132980608 0.1405628617152992 KKPEDSPSDDDVLIVYELT(ph)PTAEQK ddPTM_KYSE-520_SHP099_60min_R1 1 KKPEDSPSDDDVLIVYELTPTAEQK 25 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KKPEDSPSDDDVLIVYELT(0.997)PT(0.003)AEQK 171.07 1.7994e-10 1471100000.0 370000.0 381530.0 316830.0 292990.0 268650.0 359210.0 281510.0 275840.0 405280.0 303520.0 True False 349475.36242328637 363200.7261117949 337253.36874592374 320835.6815093441 289791.2265905943 356968.03714781627 309967.77807284007 274883.17542154004 331691.3682773961 300831.0489349864 1.1616997768698158 1.2073246009599474 1.121072342565307 1.0664978985552815 0.9633022509362789 1.1866063639759532 1.03037162942522 0.9137460258663193 1.102583557952753 1.0 18.1985939504711 -5.131663320357421 2.3742511882947652 1.0351532159930332 1.183808616930869 0.41583967657489507 0.07109805635906961 0.2963312751897338 3.249810094765127 0.020944109401767743 0.044257457721725776 7.384765000201026e-06 5.131663320357421 0.1486554009378358 KKPGDASSLPDAGLS(ph)PGSQVDSK ddPTM_KYSE-520_SHP099_60min_R1 6 KKPGDASSLPDAGLSPGSQVDSK 23 2 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 KKPGDASSLPDAGLS(0.908)PGS(0.092)QVDSK;KKPGDASSLPDAGLS(0.998)PGS(0.002)QVDSK;KKPGDASSLPDAGLS(0.9)PGS(0.1)QVDSK;KKPGDASSLPDAGLS(0.999)PGSQVDSK;KKPGDASSLPDAGLS(0.5)PGS(0.5)QVDSK;KKPGDASSLPDAGLS(0.999)PGSQVDSK 222.71 3.0849999999999996e-21 4918230000.0 3843110.0 3487250.0 3119560.0 3335540.0 3498160.0 3454640.0 3401750.0 3727240.0 4349800.0 3742990.0 True False 3629925.027250151 3319717.275531036 3320651.8290724796 3652548.7187333344 3773445.2901922707 3433078.310326357 3745632.087880662 3714311.074384359 3559985.9695346905 3709830.020602156 0.9784612791129889 0.8948434987844 0.8950954115502825 0.98455958856586 1.0171477585864672 0.9254004337829801 1.009650595062222 1.0012078865493346 0.9596089173263136 1.0 21.822921655347542 -5.276725603696802 23.558876513905492 0.9852555180330642 0.9200044107147453 0.42710116534741527 0.03315978315242662 328.0621518398312 505603.4368009654 0.009205137549732331 0.013724611914480194 5.287792399958811e-06 5.276725603696802 -0.06525110731831896 KKPS(ph)SEER ddPTM_KYSE-520_SHP099_60min_R1 1 KKPSSEER 8 2 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 KKPS(0.5)S(0.5)EER 68.893 0.018392 86686000.0 88729.0 110730.0 47757.0 57886.0 98029.0 80842.0 111110.0 66502.0 55039.0 393120.0 True False 83807.02549312373 105410.36459088136 50835.49263390172 63387.46803593951 105743.32459128731 80337.43509118262 122342.08312910107 66271.32008368341 45045.3050202813 389637.2626427322 0.21508986313243972 0.2705346092309828 0.1304687654592061 0.16268328035673787 0.2713891476243275 0.2061851952923865 0.3139896895366486 0.1700846567758823 0.11560830890443975 1.0 18.57177212942179 -10.52478262710867 3.1037717010870853 1.026488897531674 0.2086304667283996 0.9383111025175255 0.061055993428250466 37018734.070191994 43539047.013942055 8276141.402570991 0.015871771322138836 2.9868772353813173e-11 10.52478262710867 -0.8178584308032744 KKPT(ph)SPVKPIPQNTEYR ddPTM_KYSE-520_SHP099_60min_R1 1 KKPTSPVKPIPQNTEYR 17 3 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KKPT(0.5)S(0.5)PVKPIPQNTEYR 56.528999999999996 0.032411 1431100000.0 489060.0 339110.0 382540.0 369040.0 401240.0 468470.0 387600.0 405780.0 517950.0 354920.0 True False 461930.8668830605 322818.64658551273 407199.1404856406 404113.45064407826 432815.3052566906 465546.10495987703 426782.3906114626 404372.44388976437 423903.33645696146 351775.6849235813 1.3131404093020498 0.9176832294581159 1.157553401037651 1.1487816468380032 1.2303730013366732 1.3234175211996555 1.2132231103584532 1.1495178922830014 1.205038763691268 1.0 18.424296240212872 -3.938647643897169 22.357727282169684 1.16148398842995 4.882262679160475 0.15817899500712929 0.11017168210187146 2163.5195316475692 814451.2232547445 0.02714712379288567 13124.788970811405 0.00011517344465834133 3.938647643897169 3.7207786907305254 KKPTS(ph)PVKPIPQNTEYR ddPTM_KYSE-520_SHP099_60min_R1 1 KKPTSPVKPIPQNTEYR 17 3 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KKPT(0.23)S(0.77)PVKPIPQNTEYR 65.855 0.029548 1509600000.0 329930.0 301970.0 259360.0 259960.0 267080.0 280580.0 244320.0 348590.0 301210.0 259270.0 True False 311628.12520085083 287462.9079337892 276078.76059067214 284666.520240176 288097.67652267206 278828.79614413326 269018.24993341754 347380.822651518 246517.8568861884 256973.06950900782 1.2126878734657724 1.11864993667639 1.0743490013104062 1.1077679104043134 1.1211201122091636 1.0850506501591184 1.046873318077354 1.3518180069034085 0.9593139754185296 1.0 17.97125764894709 -8.610551329121096 0.011067789792885505 1.4884520241273883e-06 2.1658660768696456 0.11676469321543126 0.09850444168438187 6130.831258430436 26.51723854558781 2671.3139185929676 2515.1165162374778 2.4515946835215812e-09 8.610551329121096 2.1658645884176213 KKQDPPVTHDLR ddPTM_KYSE-520_SHP099_60min_R1 1 KKQDPPVTHDLR 12 2 M0R080;P25685-2;P25685;M0R1D6;M0QZD0;M0QYT3;M0QXK0;M0R128;A0A1B0GX60 M0R080 DNAJB1 DnaJ homolog subfamily B member 1 0 86.911 0.013396000000000002 381680000.0 170080.0 131580.0 120550.0 99513.0 149870.0 142520.0 96948.0 118040.0 141560.0 104970.0 False True 160645.32335392555 125258.6992943935 128320.84588681982 108970.68560032563 161663.91635634584 141630.47981489036 106748.44996130056 117630.54679074317 115856.27243719948 104040.04746542433 1.5440719921558366 1.2039469641343712 1.23337934778879 1.047391732847295 1.553862385636374 1.361307335638793 1.0260323073840996 1.1306275771340395 1.1135738137345819 1.0 16.666779437020633 -6.76093448212213 24.999915934929067 1.0784440334655976 1.3122936367813296 0.42076613088409076 0.1467910845130488 15.538074520256739 769429.3798377749 0.06034993722071635 0.043859316072738956 1.734065580003625e-07 6.76093448212213 0.233849603315732 KKQDS(ph)S(ph)DEDDDDDEAPKR ddPTM_KYSE-520_SHP099_60min_R1 1 KKQDSSDEDDDDDEAPKR 18 3 O14647;O14647-2;A0A0D9SGK0;B7Z3I4;A0A0D9SEP7;O14647-3 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 2 KKQDS(1)S(1)DEDDDDDEAPKR 89.46799999999999 0.0031320999999999996 897170000.0 692980.0 569990.0 553150.0 552640.0 530860.0 521980.0 462520.0 512650.0 783090.0 510110.0 True False 654539.0179786191 542606.8248275678 588806.9340712925 605162.7394427251 572635.6618197756 518722.1292013502 509276.03536020056 510871.73680340947 640900.5960924451 505590.8222595746 1.2946022537619823 1.0732133593773758 1.164591816441229 1.1969417022606266 1.1326069157279512 1.0259722019539228 1.0072889240436684 1.0104450364036148 1.2676270372712606 1.0 18.94761074965916 -6.061480611604764 4.563363721238947 1.0601028916659447 1.1727876188357829 0.2882523406283414 0.08864846360126252 0.3053998582902093 12.782025154262067 0.029177458025551082 0.029932071855304564 8.679993268944721e-07 6.061480611604764 0.11268472716983813 KKQPAS(ph)PDGR ddPTM_KYSE-520_SHP099_60min_R1 5 KKQPASPDGR 10 2 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 KKQPAS(1)PDGR;KKQPAS(1)PDGR;KKQPAS(1)PDGR;KKQPAS(1)PDGR;KKQPAS(1)PDGR 77.75399999999999 0.010438 3752660000.0 3317200.0 2745680.0 2116990.0 2415840.0 3081200.0 3574250.0 2814050.0 2785870.0 3138180.0 3716910.0 True False 3133188.3033257443 2613773.411450298 2253454.562703761 2645440.7072512186 3323672.9103701413 3551941.779949279 3098521.636481391 2776206.4671969456 2568365.6190800434 3683981.069112223 0.8504897947482639 0.7094969714597836 0.6116900495492517 0.7180929156861072 0.9021959798428307 0.9641585321189603 0.8410796848171866 0.7535886898208096 0.6971712315826248 1.0 21.81283421718988 -5.745910796345902 23.593465364414463 0.8516704470825659 0.7136067523968587 0.3080937626825516 0.09998563039493974 167.00175748114066 253732.58451576537 0.031422761908958534 0.04038792160924217 1.7951023011935978e-06 5.745910796345902 -0.13806369468570723 KKQPAS(ph)PDGRT(ph)SPINEDIR ddPTM_KYSE-520_SHP099_60min_R1 1 KKQPASPDGRTSPINEDIR 19 3 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 KKQPAS(1)PDGRT(0.537)S(0.463)PINEDIR 87.509 0.0034739000000000003 560000000.0 386630.0 361160.0 363240.0 283610.0 300320.0 294680.0 195090.0 266940.0 448040.0 292100.0 True False 365182.86317220284 343809.33148778806 386655.0316045495 310564.2091295443 323953.47541294346 292840.79281400377 214811.60109491798 266014.0474442646 366687.2301692774 289512.2212503611 1.2613728760569458 1.187546867634553 1.3355395842518936 1.0727153685888033 1.1189630407097688 1.0114971711704157 0.7419776621766706 0.9188352957791855 1.2665690884675218 1.0 18.143264724776166 -5.733307370017764 1.494304111143983 0.9725538502983481 1.2513645102127433 0.41867988060579153 0.13120787870335845 0.38665063995169296 1.795408582800449 0.05056118524664651 0.07123292896682437 1.847960270254714e-06 5.733307370017764 0.27881065991439524 KKS(ph)EPDDELLFDFLNSSQK ddPTM_KYSE-520_SHP099_60min_R1 3 KKSEPDDELLFDFLNSSQK 19 2 Q8TBA6-2;Q8TBA6 Q8TBA6-2 GOLGA5 Golgin subfamily A member 5 1 KKS(1)EPDDELLFDFLNSSQK;KKS(1)EPDDELLFDFLNSSQK;KKS(1)EPDDELLFDFLNSSQK 197.15 3.8214000000000003e-13 2387170000.0 737813.0 653613.0 625315.0 774540.0 708040.0 756017.0 844799.0 951441.0 976674.0 727517.0 True False 696885.0420962492 622212.4503868851 665623.8054393756 848152.0487260583 763758.7198034774 751298.4174727323 930199.5273637067 948140.6732389987 799334.621547961 721071.7653796606 0.9664572592567445 0.8628994786105321 0.9231034099482588 1.1762380520883202 1.0591993147885095 1.0419190620744339 1.2900235067087054 1.3149047276033352 1.1085368474067117 1.0 19.459783326697547 -5.255657217828909 21.33953796099479 1.1532713186055237 0.9120277929174238 0.516781236735814 0.09879016059146721 50.165230440446955 185132.03401711772 0.02875611374452073 0.047872122396158026 5.550636435821467e-06 5.255657217828909 -0.24124352568809992 KKS(ph)EPDDELLFDFLNSSQKEPTGR ddPTM_KYSE-520_SHP099_60min_R1 3 KKSEPDDELLFDFLNSSQKEPTGR 24 3 Q8TBA6-2;Q8TBA6 Q8TBA6-2 GOLGA5 Golgin subfamily A member 5 1 KKS(1)EPDDELLFDFLNSSQKEPTGR;KKS(1)EPDDELLFDFLNSSQKEPTGR;KKS(1)EPDDELLFDFLNSSQKEPTGR 232.53 1.7838e-28 2576620000.0 957290.0 1094720.0 986500.0 1040450.0 1027460.0 896450.0 950650.0 1034020.0 1584470.0 689000.0 True False 904187.2153896964 1042128.0079917806 1050091.3684558093 1139334.0551773014 1108315.2565522871 890854.9230287565 1046750.9794499142 1030433.2259620817 1296770.1892382696 682895.9960338895 1.3240482015431603 1.5260420533203183 1.5377032147713712 1.6683859061911395 1.622963471727964 1.3045250348554494 1.5328117100249743 1.5089167778792267 1.8989277968674982 1.0 19.381306349538644 -10.21184261977832 5.867948605603673 0.999987110901063 1.5433623726562902 0.5134786193223376 0.1597391011605171 2.67987682127946e-05 3.5996677176785997e-06 0.15388204236076858 0.03732099310375693 6.139844613748172e-11 10.21184261977832 0.5433752617552272 KKS(ph)KGDS(ph)DIS(ph)DEEAAQQSK ddPTM_KYSE-520_SHP099_60min_R1 3 KKSKGDSDISDEEAAQQSK 19 3 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 3 KKS(1)KGDS(1)DIS(1)DEEAAQQSK;KKS(1)KGDS(1)DIS(1)DEEAAQQSK;KKS(1)KGDS(1)DIS(1)DEEAAQQSK 132.28 4.1462e-06 1485740000.0 2573090.0 2364200.0 2442230.0 2147970.0 2359450.0 2658110.0 2511130.0 2556000.0 3291890.0 2613940.0 True False 2430355.5683722547 2250620.283263449 2599660.053506161 2352112.422989273 2545125.291565894 2641519.7495141597 2764979.526667083 2547133.8325748863 2694165.757793816 2590782.5252145454 0.9380777987805033 0.8687028962714934 1.0034265818165808 0.907877214740165 0.9823770489401188 1.019583744990488 1.067237214917571 0.9831523131660599 1.0399042496130426 1.0 21.304956487596918 -6.004585959936346 3.0741673277426598 1.023397760663913 0.9303926444866958 0.5691215256385034 0.0377455584983699 0.18655908628764065 3.619421255263374 0.012499824727161742 0.013527051876956563 9.89495993476123e-07 6.004585959936346 -0.0930051161772173 KKS(ph)PIINESR ddPTM_KYSE-520_SHP099_60min_R1 9 KKSPIINESR 10 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 KKS(1)PIINESR;KKS(0.999)PIINES(0.001)R;KKS(1)PIINESR;KKS(1)PIINESR;KKS(1)PIINESR;KKS(0.999)PIINES(0.001)R;KKS(1)PIINESR;KKS(1)PIINESR;KKS(1)PIINESR 160.87 4.681e-05 94166970000.0 59212700.0 51086110.0 50496610.0 50186080.0 51615590.0 50598190.0 51304050.0 54587260.0 61809900.0 48663190.0 True False 55928053.493408956 48631856.59378555 53751702.27803274 54955749.9542048 55677443.280466 50282387.9277644 56490364.053276576 54397909.53582228 50586780.26078021 48232071.99598893 1.1595614946432333 1.0082887709619828 1.1144390040407726 1.13940263563164 1.1543655699696302 1.0425093894358506 1.1712199313762515 1.1278368787545787 1.0488203837684416 1.0 25.523489452211603 -7.959448724143281 3.8615581421427727 1.000613837524167 1.1125264357665374 0.36823565094949573 0.04921202402689155 0.20519049926678418 6.758879511776009 0.04683190977937981 0.012349798633113168 1.0978709049716817e-08 7.959448724143281 0.11191259824237032 KKS(ph)PNELVDDLFK ddPTM_KYSE-520_SHP099_60min_R1 12 KKSPNELVDDLFK 13 2 F2Z2K0;Q9UNZ2;Q9UNZ2-5;Q9UNZ2-4 F2Z2K0 NSFL1C NSFL1 cofactor p47 1 KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK;KKS(1)PNELVDDLFK 191.21 1.4360999999999999e-08 173180431000.0 8984088.0 8136047.0 8043856.0 7749335.0 7860482.0 8009574.0 7929954.0 7895343.0 9542241.0 7924386.0 True False 8485722.729304582 7745179.089664475 8562375.82838466 8485829.468477482 8479057.21337534 7959583.277665385 8731591.13921292 7867955.8979199175 7809610.574720355 7854182.105119021 1.0804081972805226 0.9861216592643679 1.0901677238682903 1.080421787387229 1.0795595390956179 1.0134197515585575 1.1117123364789365 1.001753689004985 0.9943251213427282 1.0 22.905029617685805 -7.396883624072707 9.209820498827401 0.9974974243544645 1.0605506321900167 0.4113512424322229 0.035247687889916834 0.3407795056604116 23.679327812500855 0.01889471020007193 0.009042635294609566 4.009741504613533e-08 7.396883624072707 0.06305320783555213 KKS(ph)PVPVETLK ddPTM_KYSE-520_SHP099_60min_R1 1 KKSPVPVETLK 11 2 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2;Q32MZ4-3 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 KKS(0.998)PVPVET(0.002)LK 96.993 0.0015382999999999998 1177600000.0 1665500.0 1454300.0 1410300.0 1406500.0 1597300.0 1354600.0 1506700.0 1688600.0 2007600.0 1634000.0 True False 1573111.394908064 1384433.245051196 1501210.1945597832 1540173.337120357 1722998.4226061988 1346145.4389366435 1659011.9399749497 1682742.6407222021 1643070.4474775488 1619524.031232763 0.9713418044872293 0.8548395814771463 0.9269453034402209 0.9510036945533897 1.0638918530246644 0.831198187230339 1.0243824160559871 1.0390353018975074 1.0145390965436076 1.0 20.627138444980034 -6.234794452534548 0.5407437836540837 1.0236118646134256 0.9089702549789248 0.21073239936056243 0.06535374358532421 1.4653471974055974 0.9226518770261826 0.05725600263076956 0.0723271320777678 5.823787869182294e-07 6.234794452534548 -0.11464160963450076 KKS(ph)TPKEETVNDPEEAGHR ddPTM_KYSE-520_SHP099_60min_R1 1 KKSTPKEETVNDPEEAGHR 19 3 O00567 O00567 NOP56 Nucleolar protein 56 1 KKS(0.5)T(0.5)PKEETVNDPEEAGHR 178.53 1.7134e-09 528970000.0 556840.0 586930.0 728770.0 530030.0 469230.0 414430.0 401210.0 398650.0 672510.0 376500.0 True False 525950.9751669797 558733.001800109 775747.6802732286 580403.8918406698 506155.73144650843 411843.388644997 441768.2222322624 397267.1761956098 550399.1365974926 373164.50291256804 1.409434635561275 1.4972833628042577 2.078835672253063 1.5553566518535062 1.3563876721819386 1.1036510317314168 1.18384310078863 1.0645899411517419 1.474950410078127 1.0 18.50945223150628 -5.8582920258348965 2.7748565933224345 1.1740464765256624 1.6647028604264362 0.544894323355933 0.20255015588790448 0.20956518733695662 3.269605750656339 0.06835902263720937 0.08095036233682641 1.3858236678088698e-06 5.8582920258348965 0.4906563839007738 KKS(ph)TSLEPVER ddPTM_KYSE-520_SHP099_60min_R1 2 KKSTSLEPVER 11 2 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 KKS(0.951)T(0.046)S(0.002)LEPVER;KKS(0.983)T(0.015)S(0.003)LEPVER 165.34 1.2855e-05 20325600000.0 16532000.0 14291800.0 13218000.0 12906700.0 11387000.0 11994400.0 13237300.0 13234600.0 15390400.0 16244800.0 True False 15614937.00427503 13605200.475570844 14070053.429547777 14133348.88745913 12283092.11683265 11919538.500503233 14575455.467598317 13188692.261578875 12595891.320411662 16100883.71026315 0.9698186314035444 0.8449971268905266 0.873868396464421 0.8777995755879002 0.7628831024351207 0.7403033718519058 0.9052581044546963 0.8191284713876938 0.7823105580461208 1.0 23.94063653823006 -1.0000026357876324 0.9762141339896718 0.8315179260844351 115.72207227016301 0.19434301805923615 0.07283822118559675 2060.2765623282435 3.1496685728524914 0.02262874107339032 529093.9640568172 0.09999939308931065 1.0000026357876324 114.89055434407858 KKSEAPS(ph)GESR ddPTM_KYSE-520_SHP099_60min_R1 3 KKSEAPSGESR 11 2 Q99613-2;Q99613;B5ME19 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 KKS(0.002)EAPS(0.998)GESR;KKS(0.011)EAPS(0.988)GES(0.002)R;KKS(0.004)EAPS(0.991)GES(0.005)R 71.344 0.018185 187320000.0 617620.0 541020.0 463190.0 443990.0 514690.0 516000.0 427520.0 425020.0 630990.0 555370.0 True False 583359.3874050542 515028.58711242455 493047.9685302033 486186.67610953853 555193.1748144911 512779.4525995191 470737.89379311824 423545.7048204136 516418.1219634679 550449.8538713217 1.0597866150790654 0.9356503294354993 0.895718229485556 0.8832533475850356 1.0086171717728865 0.9315643359574608 0.855187607885463 0.7694537510394646 0.9381746917207661 1.0 19.070251614309264 -6.653955601343112 5.328107598062134 0.8718929425595721 0.9498763448564272 0.12687360967434946 0.07399451653657756 0.3561959829806415 15.363174591909154 0.02877889037678115 0.021977573626490977 2.218423201350916e-07 6.653955601343112 0.07798340229685519 KKSPNELVDDLFK ddPTM_KYSE-520_SHP099_60min_R1 2 KKSPNELVDDLFK 13 2 F2Z2K0;Q9UNZ2;Q9UNZ2-5;Q9UNZ2-4 F2Z2K0 NSFL1C NSFL1 cofactor p47 0 ; 131.82 1.9562e-05 511090000.0 1035290.0 980580.0 734300.0 591340.0 955190.0 875240.0 610720.0 615740.0 861150.0 608650.0 False True 977860.3999005514 933471.4649194123 781634.15292154 647540.7758071458 1030358.0187123378 869777.3025062056 672457.5376528186 613604.1416547968 704786.8678249099 603257.8345225353 1.620965935195032 1.547383907012552 1.2956883577652754 1.0734063260357976 1.707989452847873 1.441800259742361 1.1147099949146175 1.0171507215326103 1.1683012262621213 1.0 19.20241522131118 -6.788143087703748 5.278189321376126 1.0712934572635675 1.4412511396979937 0.5364506527897395 0.1700488506972276 0.162162327248947 11.940121660608446 0.07555714150269949 0.052224182437215 1.6287593142683387e-07 6.788143087703748 0.36995768243442617 KKST(ph)SLEPVER ddPTM_KYSE-520_SHP099_60min_R1 1 KKSTSLEPVER 11 2 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 KKS(0.299)T(0.609)S(0.091)LEPVER 113.43 0.00064854 6499400000.0 6580000.0 6079100.0 4982700.0 5084300.0 4432800.0 4874900.0 4739800.0 5548400.0 7033300.0 5578200.0 True False 6214994.283095202 5787050.9110848745 5303892.814601878 5567510.343349472 4781636.140818114 4844473.9408476595 5218945.239990227 5529153.895406293 5756230.0150646735 5528781.487773925 1.1241164616179413 1.0467136246715616 0.9593240077095911 1.0070049532001202 0.8648625653576631 0.8762281438614441 0.9439593971169136 1.0000673579943775 1.0411389974072436 1.0 22.398530122975515 -4.464595627552393 1.6293157598524806 0.9534494095146145 1.1524177645754472 0.4828526543847722 0.053737652921868655 0.6115320044314564 2.1323839057660843 0.016738381845251497 0.1704899157209174 3.430870869352564e-05 4.464595627552393 0.19896835506083266 KKT(ph)PVTEQEEK ddPTM_KYSE-520_SHP099_60min_R1 7 KKTPVTEQEEK 11 2 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 KKT(1)PVTEQEEK;KKT(0.751)PVT(0.249)EQEEK;KKT(0.755)PVT(0.245)EQEEK;KKT(0.638)PVT(0.362)EQEEK;KKT(0.993)PVT(0.007)EQEEK;KKT(0.847)PVT(0.153)EQEEK;KKT(0.685)PVT(0.315)EQEEK 142.91 8.0677e-05 9275420000.0 4921920.0 4717110.0 4127610.0 4338910.0 4333300.0 4461260.0 4257390.0 4457830.0 5298670.0 4531410.0 True False 4648891.285995732 4490492.955073537 4393682.345009508 4751278.701859138 4674306.056895667 4433415.621519628 4687768.529322334 4442366.828195348 4336565.09660084 4491265.232783632 1.0350961355079902 0.9998280489639183 0.9782727399259732 1.057893144937769 1.0407548462682503 0.9871195290712881 1.043752325091901 0.9891125546914143 0.9655553328150003 1.0 22.098690492671377 -7.446468026342116 7.598235316074632 0.9809756537969411 1.0188538079092129 0.2894322392538521 0.025502855801031232 0.3534809077097432 31.27959677370487 0.014329942471000738 0.006793233091038641 3.577107350111271e-08 7.446468026342116 0.0378781541122718 KKTEFLDLDNSPLSPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 KKTEFLDLDNSPLSPPSPR 19 2 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 KKTEFLDLDNSPLS(0.01)PPS(0.99)PR;KKTEFLDLDNSPLSPPS(1)PR;KKTEFLDLDNSPLS(0.004)PPS(0.996)PR;KKTEFLDLDNSPLSPPS(1)PR;KKTEFLDLDNSPLSPPS(1)PR 203.25 1.3332e-13 20011400000.0 5277770.0 4944540.0 4914250.0 4402340.0 4757900.0 4655220.0 4342600.0 4351640.0 5819340.0 4386640.0 True False 4985001.577126347 4706996.876494155 5231030.418078004 4820737.069988221 5132319.661252136 4626165.045213817 4781592.387691793 4336545.176520409 4762694.549623429 4347777.782354274 1.1465631011222068 1.082621309579757 1.2031503632288814 1.1087818447284683 1.1804466369192037 1.064029781832318 1.099778467772245 0.9974164719550633 1.0954319167260849 1.0 22.05184677452652 -6.681318643869807 1.4944757345975153 1.0370242859469954 1.1416677225337208 0.5140392910868892 0.04488083651848598 0.3224405605427602 1.4697097691107937 0.02341846109116764 0.01498497873136081 2.0829620434233935e-07 6.681318643869807 0.10464343658672548 KKVEAQLQELQVK ddPTM_KYSE-520_SHP099_60min_R1 1 KKVEAQLQELQVK 13 2 P35579 P35579 MYH9 Myosin-9 0 110.07 0.0001082 1144700000.0 675660.0 536800.0 372300.0 469180.0 640510.0 525180.0 397690.0 413550.0 522350.0 472880.0 False True 638179.7929051823 511011.3222467731 396299.0537010613 513770.72613588884 690914.4929966184 521902.15681436984 437892.3862803726 412115.4915732959 427504.4073719348 468690.6510950728 1.361622621262247 1.0902955308641642 0.8455450365291647 1.0961830045798624 1.4741375604192881 1.113532253299636 0.93428871529069 0.879291043272163 0.91212488743501 1.0 18.838276492310516 -6.731444539681869 4.7492235582820035 0.9193916357586205 1.1592600688220953 0.33733115196253827 0.16000702255106522 0.2549423393566953 13.657074446650643 0.07045614264693813 0.05158920810557191 1.855903797116937e-07 6.731444539681869 0.23986843306347483 KKVNEEKDGPIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KKVNEEKDGPISPK 14 3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 KKVNEEKDGPIS(1)PK;KKVNEEKDGPIS(1)PK 117.67 0.00015657 2843700000.0 3980300.0 4004800.0 4766800.0 3230300.0 3607300.0 3403500.0 2895300.0 2906000.0 5275400.0 3263100.0 True False 3759504.824468666 3812403.3966726484 5074075.555149668 3537306.740774891 3891173.987270616 3382257.49403578 3187985.179404972 2895919.764265496 4317520.342011887 3234191.472653384 1.1624249387388021 1.1787809809370655 1.5688853297812986 1.0937221159243322 1.2031365552016104 1.0457814642807528 0.9857131856171449 0.8954076432245478 1.3349612657502068 1.0 21.624973662010323 -5.876645610564527 1.749754884859073 1.0443445103088287 1.2817767801914581 0.27268783696631294 0.15765075447332438 0.45474009804044163 2.8640661913599614 0.057785048613592946 0.07006279898987658 1.328478069371794e-06 5.876645610564527 0.23743226988262944 KKVQIPVSRPDPEPVS(ph)DNEEDS(ph)YDEEIHDPR ddPTM_KYSE-520_SHP099_60min_R1 2 KKVQIPVSRPDPEPVSDNEEDSYDEEIHDPR 31 3 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 KKVQIPVSRPDPEPVS(1)DNEEDS(0.696)Y(0.304)DEEIHDPR;KKVQIPVSRPDPEPVS(1)DNEEDS(0.86)Y(0.14)DEEIHDPR 160.73 6.581e-10 7685100000.0 3832860.0 3991650.0 3793900.0 3348350.0 3145960.0 3283980.0 2943270.0 3074590.0 4694500.0 2714700.0 True False 3620243.615183014 3799885.1424112017 4038460.8644546275 3666576.1772818677 3393529.153936141 3263483.4626894747 3240804.4551470573 3063924.964904703 3842097.138714562 2690649.870004642 1.3454904168474244 1.4122555241290633 1.5009239624506254 1.3627102575317769 1.2612303041607889 1.2128978575290603 1.20446903600336 1.1387304602733084 1.4279439259437847 1.0 21.35952323690136 -5.776769519405557 2.4602207736289765 1.207530786858192 1.4205660762634396 0.4739046615642105 0.10455470397776641 0.2531339202118205 3.140119871964867 0.033130368002131004 0.04160329958627784 1.6719776994410062e-06 5.776769519405557 0.21303528940524763 KKVQIPVSRPDPEPVS(ph)DNEEDSY(ph)DEEIHDPR ddPTM_KYSE-520_SHP099_60min_R1 2 KKVQIPVSRPDPEPVSDNEEDSYDEEIHDPR 31 3 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 KKVQIPVS(0.004)RPDPEPVS(0.995)DNEEDS(0.393)Y(0.607)DEEIHDPR;KKVQIPVS(0.001)RPDPEPVS(0.998)DNEEDS(0.386)Y(0.616)DEEIHDPR 80.828 0.0080718 1930530000.0 1065960.0 1060270.0 1081920.0 1018520.0 825550.0 814100.0 800780.0 828080.0 1431000.0 788280.0 True False 1006829.0738614212 1009333.0377022843 1151662.2943332058 1115319.834570796 890516.0882630363 809018.899924939 881730.6572596672 825207.5837553259 1171166.4725744035 781296.4524725605 1.2886645916221942 1.2918694747788229 1.4740400915536638 1.4275245088354815 1.1397928218473663 1.035482622971915 1.1285481387625191 1.0562029062640697 1.4990039553719021 1.0 19.575510537991057 -5.76990343643024 24.822295730438746 1.139866202475005 1.372300400122191 0.39059069776589794 0.13907941297590637 175.45432533956722 514548.70013228286 0.042811231343214746 0.04932238921769949 1.6986212918485347e-06 5.76990343643024 0.23243419764718598 KKWNLDELPK ddPTM_KYSE-520_SHP099_60min_R1 3 KKWNLDELPK 10 2 P17844-2;P17844;J3KTA4;J3QR02;J3KRX8;J3QRQ7;X6RLV5;J3KTQ4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ;; 130.69 0.00023308 5134820000.0 11640700.0 10641300.0 8284030.0 6533690.0 10979100.0 9143680.0 7279380.0 7538500.0 9090570.0 6889940.0 False True 10994967.165839858 10130075.975083053 8818031.828716647 7154649.93317447 11843092.707466193 9086610.901444122 8015250.770302548 7512350.702999128 7439951.642621032 6828900.491892208 1.6100640474837673 1.4834124449624433 1.2912813474418154 1.04770159437365 1.734260547730519 1.3306111155423102 1.173724932706058 1.1000820281271289 1.0894801661635443 1.0 22.703221880989233 -6.812714127801797 2.7683643164929914 1.0797235166543584 1.4159112688123832 0.46722624397413615 0.17446583343825975 0.275497655120263 4.2956376131789655 0.08471121821013633 0.055334502002880426 1.53916745630373e-07 6.812714127801797 0.33618775215802477 KKYPS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 2 KKYPSPQK 8 2 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 KKY(0.139)PS(0.861)PQK;KKY(0.002)PS(0.998)PQK 77.305 0.01085 4611900000.0 5518500.0 3898510.0 2011180.0 5761700.0 2797830.0 3775420.0 3726090.0 5284010.0 2363490.0 1693210.0 True False 5212377.804142987 3711219.727817192 2140823.8808017764 6309290.235681734 3018003.303524892 3751856.2033590544 4102759.540334015 5265681.002607209 1934339.7947343632 1678209.4766974468 3.105916082895945 2.2114162620035445 1.2756595112397469 3.759536770163999 1.7983471940964302 2.2356304474828392 2.4447243310816282 3.137678028710431 1.1526211844190966 1.0 20.67849137576376 -7.835534902141989 8.101519166544882 1.042391735416913 2.4533478046751616 0.414822522013815 0.6731998127971568 0.2752928279430941 26.07235949049505 0.6260428687613883 0.1622878798104772 1.460377381275526e-08 7.835534902141989 1.4109560692582486 KLAAT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KLAATPK 7 1 P07305-2;P07305 P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed 1 KLAAT(1)PK;KLAAT(1)PK 69.344 0.028443 2289100000.0 4997205.0 4693601.0 3928751.0 3403436.0 3527050.0 4081015.0 3646762.0 3824279.0 4533012.0 5115920.0 True False 4720000.076968802 4468113.362721272 4182004.57568386 3726897.5341596515 3804608.7688306514 4055543.8716093497 4015412.2919273498 3811013.468742427 3709931.2887333613 5070596.928925533 0.9308568878830165 0.8811809389211444 0.8247558688460045 0.7350017337996902 0.7503275890708303 0.7998158655589935 0.7919012984489425 0.7515906947764406 0.7316557282575212 1.0 22.273724165804794 -4.741558171875049 2.3433855345813335 0.7822457379274502 0.9230677320202908 0.2566013757619807 0.07427718286292356 0.35225941125694316 3.7344762920809758 0.01897544930478384 0.06734844428314712 1.8131837914462583e-05 4.741558171875049 0.14082199409284057 KLANDFPLDLS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 4 KLANDFPLDLSPVK 14 1 Q96JM2;Q96JM2-3 Q96JM2 ZNF462 Zinc finger protein 462 1 KLANDFPLDLS(1)PVK;KLANDFPLDLS(1)PVK;KLANDFPLDLS(1)PVK;KLANDFPLDLS(1)PVK 187.31 7.153199999999999e-11 10537100000.0 11391608.0 9992171.0 10355925.0 8509105.0 10078351.0 10289271.0 8786463.0 9696386.0 12332623.0 9612011.0 True False 10759692.795632454 9512132.106605547 11023484.495565863 9317807.780844307 10871459.88572694 10225051.843077702 9674684.427655226 9662751.5001195 10093329.543326307 9526856.060571393 1.12940646181938 0.9984544792246013 1.1570957328922535 0.9780569499110761 1.1411382534391836 1.0732871136151536 1.0155170148624 1.0142644581469573 1.059460695023972 1.0 23.18356876098756 -6.7359793606986065 8.477933740700976 1.0234892662841608 1.0776845235993353 0.20078873799731267 0.05587740251251522 0.3688205928796829 106.31756309046169 0.020134779134856867 0.015289550623967758 1.836625624607201e-07 6.7359793606986065 0.054195257315174494 KLAT(ph)PPAAQESSR ddPTM_KYSE-520_SHP099_60min_R1 1 KLATPPAAQESSR 13 1 H0Y760;Q9Y4B4 H0Y760 RAD54L2 Helicase ARIP4 1 KLAT(1)PPAAQESSR 79.51100000000001 0.0085461 0.0 733120.0 856970.0 636150.0 487120.0 528080.0 762170.0 581670.0 638050.0 796620.0 722350.0 True False 692452.372161513 815799.874861806 677157.2468759883 533415.7383420316 569636.8916358114 757413.0143173937 640470.8801521404 635836.7534719895 651973.8891559889 715950.5409797957 0.9671790612992275 1.1394640106638707 0.9458156787608292 0.7450455133563265 0.7956372109953985 1.0579124827266078 0.8945741968092382 0.888101505729476 0.9106409616839549 1.0 19.449500401664118 -4.97422160380645 11.497657050860148 0.8924212276712989 1.0508117974457556 0.30242929702752197 0.09233442024286576 0.7472356792365172 327.30510718374126 0.024696763332766842 0.051220668592341624 1.0611539528940962e-05 4.97422160380645 0.15839056977445665 KLAVNMVPFPR ddPTM_KYSE-520_SHP099_60min_R1 2 KLAVNMVPFPR 11 1 P04350;Q9BUF5;K7ESM5;A0A0B4J269;Q13509;Q13509-2;Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A075B736;Q5SQY0;A6NNZ2;CON__ENSEMBL:ENSBTAP00000025008;Q9H4B7;P68371;Q3ZCM7 P04350;A0A0B4J269;Q5JP53;P68371 TUBB4A;TUBB6;TUBB3;TUBB;TUBB2B;TUBB2A;TUBB8;TUBB1;TUBB4B Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-1 chain;Tubulin beta-4B chain;Tubulin beta-8 chain 0 ; 88.134 0.022785 332260000.0 1079440.0 984330.0 861840.0 573920.0 1353140.0 1154920.0 774680.0 887570.0 823790.0 724450.0 False True 1019561.3113897091 937041.3092905482 917395.5853927558 628465.1842446598 1459624.419686569 1147711.7158841784 852992.2145482149 884491.226830396 674210.5020559521 718031.9366135721 1.4199386676283914 1.3050134144588081 1.2776528990053497 0.8752607679383557 2.0328126720526423 1.5984131866015452 1.1879586005201261 1.2318271398928156 0.9389700759491376 1.0 19.453688488080335 -7.419715407366119 1.839695982636085 0.9789488908968483 1.400248997359091 0.26144358398214584 0.2794250207668595 0.560266512595326 3.411298595516578 0.2450963863816899 0.08564049328512169 3.8043861560677384e-08 7.419715407366119 0.4213001064622427 KLCQPQSTGSLLGDPAASS(ph)PPGER ddPTM_KYSE-520_SHP099_60min_R1 5 KLCQPQSTGSLLGDPAASSPPGER 24 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 KLCQPQSTGSLLGDPAAS(0.39)S(0.61)PPGER;KLCQPQSTGSLLGDPAAS(0.097)S(0.903)PPGER;KLCQPQSTGSLLGDPAAS(0.017)S(0.983)PPGER;KLCQPQSTGSLLGDPAAS(0.034)S(0.966)PPGER;KLCQPQSTGSLLGDPAAS(0.003)S(0.997)PPGER 208.46 4.850600000000001e-21 13248680000.0 5572800.0 5589700.0 5564060.0 3853820.0 4571850.0 5020360.0 4015560.0 4996190.0 6670230.0 5785490.0 True False 5263665.674898621 5321162.421689245 5922728.210410765 4220085.894106766 4931628.584731835 4989026.071032014 4421491.9928889675 4978859.383009513 5459084.374814782 5734235.059643104 0.9179368512364802 0.9279637765704762 1.0328715423778587 0.735945745197516 0.860032512346778 0.8700421275270374 0.7710691917753646 0.8682691468388104 0.9520161482802125 1.0 22.45116961454277 -5.245334307382196 24.98748114522593 0.8558973918409729 0.9564280164297015 0.23050003173514144 0.07752047520629646 1127.4534854931944 1749273.99033574 0.020544308058400924 0.03544215388011048 5.6841521273665385e-06 5.245334307382196 0.10053062458872863 KLDDDS(ph)DSPSFFEEKPEEPVVLALDPK ddPTM_KYSE-520_SHP099_60min_R1 3 KLDDDSDSPSFFEEKPEEPVVLALDPK 27 2 A0A2R8Y6X0;A0A669KBJ7;Q9H2P0 A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein 1 KLDDDS(0.981)DS(0.015)PS(0.004)FFEEKPEEPVVLALDPK;KLDDDS(0.995)DS(0.005)PSFFEEKPEEPVVLALDPK;KLDDDS(0.986)DS(0.014)PSFFEEKPEEPVVLALDPK 264.94 3.7928000000000003e-41 4674050000.0 1752060.0 1585090.0 1721699.0 1760380.0 1852020.0 1639500.0 1732220.0 1960110.0 2189240.0 1721880.0 True False 1654869.73915498 1508939.8971314032 1832682.4723558004 1927685.9859224518 1997763.4374476508 1629267.2723583546 1907329.7024380486 1953310.8359031132 1791729.2022493258 1706625.4828023708 0.9696736371459748 0.8841658069312563 1.073863299724341 1.1295307642758783 1.1705927619029899 0.954671829746155 1.1176029665900165 1.1445456871390856 1.0498666639544196 1.0 20.702715064488245 -4.80447873025196 8.07166761206382 1.0874517512600956 0.9271318723739386 0.46123351604049245 0.06584990487213015 0.1729751107829965 28.6001045970859 0.017027792418658934 0.03612360891240857 1.568632720221476e-05 4.80447873025196 -0.16031987888615706 KLDDDSDS(ph)PSFFEEKPEEPVVLALDPK ddPTM_KYSE-520_SHP099_60min_R1 1 KLDDDSDSPSFFEEKPEEPVVLALDPK 27 2 A0A2R8Y6X0;A0A669KBJ7;Q9H2P0 A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein 1 KLDDDS(0.049)DS(0.923)PS(0.028)FFEEKPEEPVVLALDPK 99.99700000000001 0.0019404 331760000.0 207990.0 207170.0 189370.0 170860.0 188800.0 198620.0 171300.0 213410.0 245590.0 161480.0 True False 196452.3800822143 197217.24223149035 201577.09320271286 187098.48302906772 203657.48587494568 197380.33890565176 188616.67572689248 212669.73052026858 200997.0468200893 160049.41282953884 1.2274483024279919 1.2322272149885187 1.2594678708218894 1.1690044950576457 1.2724663107127532 1.2332462544918696 1.1784902699254467 1.3287754497842064 1.2558437001837794 1.0 17.288157858540135 -10.331384133877071 5.087220724973594 0.9999049409031767 1.2395466903225099 0.7348591261429973 0.043187553611643115 4.619240260811886e-05 6.071090808672872e-06 0.04148396567305067 0.010057361161691808 4.662468021439681e-11 10.331384133877071 0.23964174941933314 KLDEAVAEAHLGK ddPTM_KYSE-520_SHP099_60min_R1 6 KLDEAVAEAHLGK 13 1 P23526;P23526-2 P23526 AHCY Adenosylhomocysteinase 0 ;;;;; 116.96 0.00024333 11986640000.0 20548200.0 18709300.0 13271320.0 11727560.0 18642000.0 17364900.0 13537810.0 17017100.0 16371920.0 16403650.0 False True 19408350.38417884 17810477.144768186 14126810.522062799 12842143.77638052 20109019.341529347 17256519.217917394 14906343.951093297 16958071.651921004 13399192.030517342 16258326.422846604 1.1937483526536743 1.0954680501272542 0.8688969672924917 0.7898810395597926 1.2368443601471584 1.0613957900161302 0.9168436875610108 1.0430391917885902 0.8241433762634058 1.0 23.954675423117482 -4.552035898300979 6.321721451057585 0.9739486445590995 1.171356411226828 0.26055461590781104 0.12385588647834064 0.20940158313036827 26.654535350584084 0.03275210593251896 0.09286691834779373 2.8052017534974478e-05 4.552035898300979 0.19740776666772852 KLDEDAS(ph)PNEEKGDVPK ddPTM_KYSE-520_SHP099_60min_R1 4 KLDEDASPNEEKGDVPK 17 2 Q9H0B6;A8MZ87;C9JHT2;E9PM83;A8MX29 Q9H0B6 KLC2 Kinesin light chain 2 1 KLDEDAS(1)PNEEKGDVPK;KLDEDAS(1)PNEEKGDVPK;KLDEDAS(1)PNEEKGDVPK;KLDEDAS(1)PNEEKGDVPK 171.06 1.9234e-08 4534730000.0 3081020.0 2804210.0 2436350.0 2857050.0 2903180.0 2880430.0 2860050.0 3092520.0 3178400.0 2729470.0 True False 2910109.678738901 2669491.542394975 2593401.019297826 3128583.1729965955 3131643.749165384 2862452.167928742 3149171.76539813 3081792.7699195966 2601282.6809437354 2705289.019295525 1.075711193141468 0.9867675961255069 0.9586410179468237 1.156469105770924 1.1576004363411363 1.0580947719494103 1.1640796021928168 1.139173207719638 0.9615544447894616 1.0 21.36735130179781 -5.258232916452511 24.991400638055843 1.1012442800527962 1.0050127023674646 0.21697735238548832 0.07121777355433678 370.82811670341823 2890245.487309789 0.019330993296495784 0.03177667916864729 5.517814340384656e-06 5.258232916452511 -0.09623157768533153 KLDELYGTWR ddPTM_KYSE-520_SHP099_60min_R1 4 KLDELYGTWR 10 1 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 ;;; 192.44 1.7764e-07 16247280000.0 11134600.0 9552590.0 7031070.0 6216360.0 11550240.0 9295140.0 7705490.0 6877170.0 7980490.0 7186780.0 False True 10516941.541725196 9093669.237670084 7484304.022309753 6807160.98538322 12459178.176124107 9237125.583402881 8484436.127535405 6853314.702413544 6531434.187781483 7123110.720430234 1.4764534701897734 1.2766429716707854 1.0507072423911028 0.9556444161199377 1.749120386461096 1.2967825358813123 1.1911138911824954 0.9621238488905034 0.9169356541164343 1.0 22.764075984794168 -7.151734021468725 2.9577143671417847 0.9491580199111042 1.2911353359177065 0.35606823553642575 0.2046553598291113 0.33504373168690066 5.588542120867346 0.12130258211808126 0.06207514414203781 7.051247821079984e-08 7.151734021468725 0.3419773160066023 KLDEMTDRDWR ddPTM_KYSE-520_SHP099_60min_R1 1 KLDEMTDRDWR 11 2 Q9BUQ8 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 0 96.103 0.0014295 762240000.0 521180.0 596330.0 417720.0 302360.0 550760.0 569010.0 375360.0 411010.0 546360.0 422790.0 False True 492269.10645342775 567681.4116904212 444646.89957563113 331096.2034921508 594101.6786042645 565458.5975264575 413305.05196057435 409584.30224045535 447154.79661478003 419044.40952564235 1.1747420923970222 1.3547046536977685 1.06109731920531 0.7901219917644319 1.4177535008205615 1.3494001701789933 0.9863037009094933 0.9774245710713673 1.067082119341381 1.0 18.67674362052687 -6.800586842246107 24.998472040830368 1.0058210738163296 1.1848700053715575 0.21971990535936292 0.16922503389064047 287.3614877379717 183498.4995771855 0.07628549329203949 0.05143259647297483 1.5827530451330286e-07 6.800586842246107 0.17904893155522794 KLDGFPLLR ddPTM_KYSE-520_SHP099_60min_R1 2 KLDGFPLLR 9 1 P09661;H0YKK0 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 0 ; 137.98 0.0011004 836730000.0 1219710.0 1062790.0 811570.0 783520.0 1344110.0 1115990.0 823600.0 914230.0 899810.0 865700.0 False True 1152050.254868395 1011731.973119688 863885.1007579125 857985.5052261219 1449883.8100602385 1109024.6924545274 906857.5255614043 911058.7495128864 736427.1863642029 858030.5715044076 1.3426680739923695 1.1791327800194715 1.00682321754951 0.9999474770715842 1.6897810616679065 1.2925235175595728 1.056905844242108 1.0618022011913901 0.8582761626698285 1.0 19.71066952609177 -6.934513768459659 3.4846530676687095 0.9800723563618046 1.2449470143246764 0.3151206758361036 0.18811532316118076 0.34332046711168773 8.41545488426785 0.09512933236245502 0.059611613471623554 1.162749687707572e-07 6.934513768459659 0.2648746579628718 KLDKENLS(ph)DER ddPTM_KYSE-520_SHP099_60min_R1 7 KLDKENLSDER 11 2 Q9BZI7-2;Q9BZI7 Q9BZI7-2 UPF3B Regulator of nonsense transcripts 3B 1 KLDKENLS(1)DER;KLDKENLS(1)DER;KLDKENLS(1)DER;KLDKENLS(1)DER;KLDKENLS(1)DER;KLDKENLS(1)DER;KLDKENLS(1)DER 101.3 0.0010897 6386380000.0 6712070.0 6795930.0 6466740.0 5858970.0 6408600.0 5850800.0 5596230.0 5837230.0 7429750.0 6149440.0 True False 6339738.096920185 6469443.321901103 6883596.407549828 6415804.74723644 6912920.360053906 5814282.986955937 6161951.542341546 5816982.011549727 6080694.688755889 6094960.745791928 1.0401606115834718 1.0614413433864565 1.1293914259090823 1.052640864285472 1.1342026057881853 0.9539492097582785 1.0109911776865619 0.9543920386305814 0.9976593685126047 1.0 22.539185498613683 -6.269397608329312 24.99904462119951 0.9822724102536812 1.0831657887156632 0.6960639077285843 0.0330908611098406 330.5298573749827 1038285.2865386325 0.011124871503154747 0.009991491297566185 5.37777207507961e-07 6.269397608329312 0.10089337846198199 KLDPAQS(ph)ASR ddPTM_KYSE-520_SHP099_60min_R1 1 KLDPAQSASR 10 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 KLDPAQS(0.857)AS(0.143)R 74.85300000000001 0.01146 882830000.0 2718900.0 1911500.0 1386400.0 1539600.0 1789400.0 1868600.0 1712500.0 1729600.0 1998600.0 1656100.0 True False 2568077.1970072263 1819668.6707800056 1475769.5623184303 1685923.121102383 1930215.5997067133 1856937.374278026 1885616.2123893949 1723600.4212916747 1635704.6206060105 1641428.2424263016 1.5645382055880706 1.1085886204140336 0.8990765018987364 1.027107416289067 1.1759366323888374 1.1312936662605282 1.148765546766847 1.0500613896736108 0.9965130234314534 1.0 20.64652025096912 -4.269605224746794 4.646100368037448 1.061544134597977 1.5921228978267588 0.7898102805547322 0.07845536082723002 0.08393332325563856 4.903646589617581 0.021416980831053967 0.14342063455967122 5.375201821521023e-05 4.269605224746794 0.5305787632287817 KLDPAQS(ph)ASRENLLEEQGSIALR ddPTM_KYSE-520_SHP099_60min_R1 2 KLDPAQSASRENLLEEQGSIALR 23 2 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 KLDPAQS(0.5)AS(0.5)RENLLEEQGSIALR;KLDPAQS(0.5)AS(0.5)RENLLEEQGSIALR 77.984 0.006636799999999999 1391920000.0 112693.0 72682.0 66691.0 45224.0 62665.0 78561.0 61091.0 74828.0 89122.0 49890.0 True False 106441.69464207397 69190.24762209374 70990.00856937276 49522.0753629086 67596.37898492302 78070.6716582767 67266.67447070395 74568.43913298653 72939.6913827924 49448.01341383263 2.1525979972392153 1.3992523226977283 1.4356493551167406 1.0014977740047137 1.36701910386583 1.5788434411894319 1.3603514039633129 1.5080168844988764 1.4750782963181324 1.0 15.59362494106805 -4.257215396350968 4.511672829104751 1.3599960177647898 2.2077246895573994 0.6271454709849177 0.186281863032628 0.13480594460814171 7.013465986341234 0.04680765081995625 0.36544576899083453 5.5307573307916126e-05 4.257215396350968 0.8477286717926096 KLDPAQSAS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 KLDPAQSASR 10 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 KLDPAQS(0.122)AS(0.878)R 47.622 0.058490999999999994 0.0 1537100.0 1166800.0 1087700.0 1008400.0 1154900.0 1200900.0 1119000.0 1202400.0 1390400.0 1197000.0 True False 1451833.9988671169 1110745.1765974942 1157814.8823815342 1104238.032813485 1245784.0595178755 1193404.7376487642 1232119.440387581 1198229.1550422697 1137938.40913169 1186395.5112519073 1.2237352426722465 0.9362351476072381 0.9759096957133508 0.9307503461879014 1.0500579677710515 1.0059080014467188 1.0385402074620333 1.0099744509129804 0.9591560304631593 1.0 20.17815361377785 -4.2529863553794245 24.980183617422345 0.9915855063033595 1.2237353600636511 0.7751457907273467 0.03781514124863344 530.9643501616149 1569060.4349030643 0.009857590318376687 0.11123735518038864 5.584877409731582e-05 4.2529863553794245 0.23214985376029162 KLDPAQSAS(ph)RENLLEEQGSIALR ddPTM_KYSE-520_SHP099_60min_R1 2 KLDPAQSASRENLLEEQGSIALR 23 2 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 KLDPAQS(0.347)AS(0.653)RENLLEEQGSIALR;KLDPAQS(0.081)AS(0.919)RENLLEEQGSIALR 108.01 0.00038395 2264600000.0 888215.0 730998.0 752621.0 494264.0 509509.0 520289.0 499545.0 613214.0 992939.0 544537.0 True False 838943.9433372951 695879.7588296316 801136.1538961777 541238.7019541094 549604.4595903477 517041.6833595951 550043.8836893791 611086.9037592235 812646.3075552436 539712.8258233754 1.5544265453714547 1.2893519025937747 1.484374866715424 1.0028272000547813 1.018327586993846 0.9579940639187263 1.0191417683102915 1.132244546582641 1.5057013075712742 1.0 19.04183244659434 -5.258894966462383 24.989527312933575 1.0848507209533327 1.4273811999187864 0.5023431573244674 0.1601765935674956 197.8738199312502 1943372.8375075634 0.04558932888249766 0.07453341781252863 5.509409246174679e-06 5.258894966462383 0.34253047896545374 KLDPAVGS(ph)PPAPPPPPVPS(ph)PPFPCPADR ddPTM_KYSE-520_SHP099_60min_R1 4 KLDPAVGSPPAPPPPPVPSPPFPCPADR 28 1 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 2 KLDPAVGS(1)PPAPPPPPVPS(1)PPFPCPADR;KLDPAVGS(1)PPAPPPPPVPS(1)PPFPCPADR;KLDPAVGS(1)PPAPPPPPVPS(1)PPFPCPADR;KLDPAVGS(1)PPAPPPPPVPS(1)PPFPCPADR 130.01 5.5096e-05 3346390000.0 1479350.0 1480990.0 1390063.0 1410662.0 1383540.0 1388730.0 1355718.0 1555000.0 1776370.0 1571160.0 True False 1397287.5064888878 1409841.0173886884 1479668.6851594367 1544730.8923490033 1492416.7267342287 1380062.4209467617 1492767.2059726303 1549606.0679397285 1453825.9866436005 1557240.7447439844 0.8972841939854371 0.9053455749518492 0.9501862124746159 0.9919666548430585 0.9583725135445175 0.88622290779686 0.9585975778061511 0.9950973047487843 0.9335910273029842 1.0 20.570560567305332 -4.767943291581836 4.249838535381458 0.9580229641132143 0.8994720581056012 0.3510319093360189 0.03171011079870299 0.2270464134170077 9.49431549529104 0.008653547084128941 0.022024632807683582 1.7063051768910816e-05 4.767943291581836 -0.058550906007613146 KLDPAVGSPPAPPPPPVPS(ph)PPFPCPADR ddPTM_KYSE-520_SHP099_60min_R1 2 KLDPAVGSPPAPPPPPVPSPPFPCPADR 28 1 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 KLDPAVGSPPAPPPPPVPS(1)PPFPCPADR;KLDPAVGSPPAPPPPPVPS(1)PPFPCPADR 116.22 0.00022489 574400000.0 520150.0 507220.0 398270.0 386200.0 403160.0 525390.0 423390.0 472100.0 620910.0 572230.0 True False 491296.24260668247 482852.38984725875 423943.1214545313 422904.3318847358 434886.39833338506 522110.8461264751 466190.3930882026 470462.3952889686 508168.3958673461 567160.4873882034 0.8662384872210002 0.851350544659437 0.7474835269410361 0.7456519649883 0.7667783775559793 0.9205698523372393 0.821972622308419 0.8295048857431282 0.8959869510788415 1.0 19.113397501663872 -8.311067182067301 0.5776437790274007 1.0052159182575253 0.803459195367927 0.5529283538813481 0.05139938223415694 1.0888739478769354 0.7459361893776049 0.06728963960375282 0.02564308137150358 4.88576774369924e-09 8.311067182067301 -0.20175672288959834 KLDPDSIPS(ph)PIQVIENDR ddPTM_KYSE-520_SHP099_60min_R1 2 KLDPDSIPSPIQVIENDR 18 1 O94855;O94855-2 O94855 SEC24D Protein transport protein Sec24D 1 KLDPDS(0.001)IPS(0.999)PIQVIENDR;KLDPDS(0.001)IPS(0.999)PIQVIENDR 94.449 0.00071016 536577000.0 223655.0 184282.0 184604.0 178892.0 178432.0 193952.0 172275.0 193177.0 214836.0 192633.0 True False 211248.4113048111 175428.8161070785 196503.86921684322 195893.841894159 192473.58326079632 192741.4736251585 189690.23824197552 192506.91407485094 175827.1979748386 190926.42148620624 1.1064388556618554 0.9188294356616987 1.0292125505062164 1.0260174593400193 1.0081034450996709 1.0095065529685392 0.9935253421993245 1.00827801923035 0.9209160084087236 1.0 17.542657239355183 -7.669036083664611 11.508627450125896 0.9605307464951032 1.0095651875674458 0.16447571763537527 0.04654184442659515 0.708931277849868 82.33837058001195 0.029000783204570356 0.01094131601940449 2.1427125649330283e-08 7.669036083664611 0.04903444107234267 KLDPELHLDIK ddPTM_KYSE-520_SHP099_60min_R1 2 KLDPELHLDIK 11 1 B4DY09;Q12905 B4DY09 ILF2 Interleukin enhancer-binding factor 2 0 ; 122.35 0.0004258 2165650000.0 7611100.0 6673900.0 4958400.0 4190700.0 7253100.0 6226800.0 4596000.0 5425500.0 5357400.0 4781000.0 False True 7188897.110648301 6353275.826271867 5278026.397720502 4588982.868020103 7823877.705506188 6187936.231485814 5060608.532637467 5406680.206821213 4384631.209063667 4738644.059561712 1.517078940787382 1.3407370856336267 1.1138263037651912 0.9684168741816301 1.6510794242329812 1.3058453333289926 1.0679444307335322 1.1409762241820056 0.9252923735042492 1.0 22.176042867182044 -6.782189367085207 5.396445450288983 1.0419938380223435 1.3082120167734803 0.35980089441682217 0.1846135108994757 0.23637386690424053 19.46687415511311 0.08146616430965188 0.05666284390876373 1.6512416440204538e-07 6.782189367085207 0.26621817875113685 KLDPGSEETQTLVR ddPTM_KYSE-520_SHP099_60min_R1 1 KLDPGSEETQTLVR 14 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 102.29 0.0026089000000000004 1824400000.0 1818400.0 1678100.0 1441300.0 1301800.0 1800800.0 1759200.0 1294800.0 1383700.0 1763000.0 1551200.0 False True 1717529.7271094709 1597481.5571205462 1534208.504161537 1425522.680599558 1942512.7148495887 1748220.180257893 1425691.0200302438 1378900.2676580062 1442883.6416133258 1537457.574815339 1.1171233309093163 1.0390410657753706 0.9978867250017014 0.9271948078117048 1.2634577673357263 1.137085152068582 0.927304299893596 0.8968704504406394 0.9384868013588132 1.0 20.55211517005378 -6.775825696726484 24.925227182840302 0.9320711996376341 1.076043038421209 0.37875701237407444 0.08722882089566474 267.1790810258797 462900.5335234708 0.03928188729565065 0.026618329606827033 1.6756152461178063e-07 6.775825696726484 0.1439718387835749 KLDVEEPDS(ph)ANSSFYSTR ddPTM_KYSE-520_SHP099_60min_R1 1 KLDVEEPDSANSSFYSTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 KLDVEEPDS(0.999)ANS(0.001)SFYSTR 139.47 4.9313e-06 1228400000.0 1065400.0 898330.0 962790.0 1002000.0 1102300.0 894810.0 996290.0 1051000.0 1317900.0 851900.0 True False 1006300.1381777534 855172.878379179 1024852.9839184657 1097229.778737716 1189044.7387709345 889225.1588770836 1097004.71605339 1047354.3263052447 1078602.5815554198 844352.8287681714 1.1918005173806872 1.0128146069301303 1.2137733764848357 1.299492038581155 1.4082320781771231 1.0531440513729036 1.2992254880626304 1.2404225942290414 1.2774311221637003 1.0 19.68748645671832 -11.250955835916681 2.328896092521879 0.1508800769880172 1.2210621144103537 0.2641880393877518 0.11104887433469766 3185654.538149667 716133.9471356682 14295944.340880241 0.029557146849035546 5.6110503277737525e-12 11.250955835916681 1.0701820374223365 KLDVEEPDSANS(ph)SFYSTR ddPTM_KYSE-520_SHP099_60min_R1 1 KLDVEEPDSANSSFYSTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 KLDVEEPDS(0.001)ANS(0.58)S(0.419)FYSTR 118.35 4.7195e-05 612930000.0 350070.0 319550.0 409050.0 368910.0 325990.0 343450.0 340890.0 403670.0 448430.0 360980.0 True False 330650.91925275617 304198.33834567165 435418.0175031404 403971.0954831645 351643.5583706229 341306.40115369105 375350.48796579306 402269.7629872858 367006.41600037704 357781.99803819077 0.924168686702514 0.8502337736768986 1.2169925258695171 1.1290984389886585 0.9828430728733517 0.953950738229314 1.0491038957352097 1.124343217917706 1.025782230555942 1.0 18.44872127380428 -4.7318058869496635 24.999853382292944 1.0602029918902345 0.8872010453911071 0.4507919236855613 0.07640893897424833 197.53820425500894 166647.38228341984 0.020694511753199453 0.054735928398530885 1.8543602664474405e-05 4.7318058869496635 -0.17300194649912737 KLDVEEPDSANSS(ph)FYSTR ddPTM_KYSE-520_SHP099_60min_R1 1 KLDVEEPDSANSSFYSTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 KLDVEEPDSANS(0.148)S(0.852)FYSTR 137.45 5.4493e-06 626330000.0 317690.0 248390.0 258150.0 237230.0 230760.0 239190.0 246710.0 325140.0 337370.0 262020.0 True False 300067.102400686 236456.97155900914 274790.76205460425 259776.26787419984 248919.49915520367 237697.1264869745 271649.85445756937 324012.1652282468 276112.1124056089 259698.7066484753 1.1554431913550223 0.9105050025492586 1.0581137103102995 1.0002986584982478 0.9584934109515524 0.915280362981238 1.0460192812021625 1.2476464338608562 1.0632017231389241 1.0 17.986479303561037 -7.007147044290977 24.849468173269308 1.12262102553557 0.995129720288623 0.20663458259296064 0.08875331764583677 364.46685503999925 1267208.0334580957 0.03647789084622991 0.023485757167420435 9.836779937164405e-08 7.007147044290977 -0.12749130524694696 KLDYGQHVVAGT(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 KLDYGQHVVAGTPGR 15 1 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 1 KLDYGQHVVAGT(1)PGR;KLDYGQHVVAGT(1)PGR 148.2 1.1895e-05 446470000.0 892640.0 908200.0 783470.0 813170.0 857640.0 795530.0 727200.0 762790.0 994700.0 906500.0 True False 843123.4797662759 864568.7087640085 833973.7297963216 890453.4323115244 925131.3886959137 790564.8021831306 800712.4727880689 760144.0595265249 814087.5543464419 898469.1152463284 0.9384000690275495 0.9622687013865516 0.9282163578518506 0.991078510325192 1.0296752253328991 0.8799020342133694 0.8911964353594302 0.8460436164443118 0.9060829588151708 1.0 19.77710938657851 -6.287454804902718 24.98096305117201 0.894182192103486 0.9683600160036393 0.3279066822219677 0.045487471820961994 792.6393323197217 761118.5607365152 0.01579249805862906 0.013931390561535294 5.158758471865512e-07 6.287454804902718 0.07417782390015326 KLEAAEDIAYQLSR ddPTM_KYSE-520_SHP099_60min_R1 2 KLEAAEDIAYQLSR 14 1 P35232 P35232 PHB Prohibitin 0 ; 147.92 8.501e-06 906980000.0 1207260.0 851210.0 579780.0 718130.0 948850.0 838180.0 710870.0 782330.0 754450.0 675150.0 False True 1140290.8811868548 810316.5939077418 617153.5464807993 786380.8592863419 1023519.0967820021 832948.6077129148 782731.6770226285 779616.2798271952 617460.8981367984 669168.6962587517 1.7040409803418708 1.2109302160100024 0.9222690032143415 1.1751608580660011 1.5295382203387344 1.2447513046707632 1.1697075511732615 1.1650519281400098 0.9227283069111782 1.0 19.352010432053696 -1.0000000000000002 0.15863149804729604 0.9790072101491052 2.6272752098085106 0.29598695697681066 0.19879577087325692 109.10846140958812 1.1212798062224374 0.6667613855671737 41.94386170196647 0.09999999999999995 1.0000000000000002 1.6482679996594054 KLEAAEER ddPTM_KYSE-520_SHP099_60min_R1 4 KLEAAEER 8 1 P16949;P16949-2;A2A2D0;E5RGX5;Q93045;Q93045-2;E5RIR6;E7EVN3;Q9H169-3;Q9H169;Q9H169-4;Q9H169-2 P16949 STMN1;STMN2;STMN4 Stathmin;Stathmin-2;Stathmin-4 0 ;;; 132.01 0.0019105 8619590000.0 14433200.0 13705900.0 9479060.0 8715040.0 14048400.0 14320600.0 10283970.0 12746000.0 12608970.0 12068030.0 False True 13632561.624129128 13047447.991024677 10090095.374632236 9543314.78132768 15153929.155538063 14231219.82344316 11323574.049475135 12701787.10093877 10319498.89426727 11961116.64298526 1.1397398780593035 1.0908219007024322 0.8435746992359356 0.7978615263253428 1.2669326458266141 1.1897902385049668 0.9466987395458585 1.0619231866104981 0.8627538048731649 1.0 23.51184874439118 -7.745748185462419 24.823733730308405 0.9313768651291254 1.0382569498499974 0.08795964012999824 0.14225652403796563 551.0620950688038 871798.6407924002 0.10407624037516203 0.039032119613133374 1.7957745589313954e-08 7.745748185462419 0.10688008472087196 KLEDGPK ddPTM_KYSE-520_SHP099_60min_R1 8 KLEDGPK 7 1 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ;;;;;;; 104.44 0.010253 61962300000.0 48321190.0 42601740.0 26516520.0 25807650.0 44907050.0 46428000.0 32987050.0 38853780.0 37075960.0 42158080.0 False True 45640717.2647959 40555088.46388457 28225817.307132088 28260401.296647076 48440979.34883729 46138225.63040784 36321702.936583735 38719005.30572044 30343900.27289284 41784592.209689945 1.092285812812401 0.9705751885854171 0.6755077844360643 0.6763354576927861 1.1593024315217253 1.1041923156475912 0.869260677579633 0.9266335569679537 0.726198310626471 1.0 25.316467720380896 -11.444076483224267 2.157423375433604 1.8059414292200748 0.9112553667527796 0.024574025667077004 0.1679444347747769 13986141.09359275 1369453.4729283126 55047487.69865301 0.04558922577835051 3.5968598559095075e-12 11.444076483224267 -0.8946860624672952 KLEDIR ddPTM_KYSE-520_SHP099_60min_R1 2 KLEDIR 6 1 Q15393;Q15393-3 Q15393 SF3B3 Splicing factor 3B subunit 3 0 ; 93.262 0.035179 2111700000.0 7424500.0 6834200.0 5006200.0 4309000.0 7048700.0 6717900.0 5143100.0 5871500.0 5758000.0 5765100.0 False True 7012648.184626182 6505874.773656658 5328907.662203209 4718526.064451912 7603392.5883830935 6675971.094221524 5663014.739818918 5851133.136918404 4712492.347367864 5714025.699179937 1.2272692763059536 1.1385798937849307 0.9326012767089935 0.8257796364355 1.3306542512530726 1.1683481044160586 0.9910726758949753 1.0239948934353138 0.8247236878973417 1.0 22.446076094222203 -7.251830747087009 2.136277768874903 0.9254929568734749 1.0920951241648043 0.19076013107160217 0.14318904723682935 0.6288446527619029 5.4229432570631575 0.10617787477105106 0.044530208475709696 5.5997579231283125e-08 7.251830747087009 0.16660216729132937 KLEEEQIILEDQNCK ddPTM_KYSE-520_SHP099_60min_R1 4 KLEEEQIILEDQNCK 15 1 P35579 P35579 MYH9 Myosin-9 0 ;;; 238.83 2.521e-18 4773800000.0 8332600.0 7505000.0 4973840.0 6007200.0 8114400.0 7271600.0 6367400.0 7136800.0 5991300.0 6415900.0 False True 7870374.067373717 7144448.534765327 5294461.684825382 6578122.481869456 8752957.115379555 7226215.24713694 7011078.931835468 7112044.10654165 4903430.9483822575 6359060.117494669 1.2376631014575898 1.1235069967509734 0.8325855687791932 1.0344488588450542 1.3764545315901227 1.136365298270511 1.1025338339776036 1.1184112078096913 0.771093661293157 1.0 22.60038211721876 -7.7428754643651265 24.900365348622707 0.8855468943239154 1.116393493775013 0.3094118911483783 0.1401587096209955 258.08644910435765 346182.28793884045 0.1005073887341839 0.03783611329533625 1.8076924145401212e-08 7.7428754643651265 0.23084659945109764 KLEELELDEQQR ddPTM_KYSE-520_SHP099_60min_R1 1 KLEELELDEQQR 12 1 Q02750;Q02750-2 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 0 115.69 0.00037339 307540000.0 364440.0 336690.0 226890.0 234030.0 378540.0 345300.0 283270.0 312330.0 321250.0 326190.0 False True 344223.7867068716 320514.90701800666 241515.69243683567 256272.14083631494 408328.94440202275 343144.85461746814 311905.6960487846 311246.60012837034 262919.0980534776 323300.21037197986 1.0647187216822955 0.991384777168043 0.7470322773961536 0.7926754533857421 1.2630024086040998 1.0613814764384335 0.964755623542326 0.9627169737076849 0.8132351592068885 1.0 18.302514920665157 -4.3644165207985814 4.796671304925978 0.9543061914513098 1.062315474421615 0.05553847915647825 0.14089631681991657 0.7229241675942654 24.41045248060256 0.038047244681808014 0.17332806156568972 4.320992168681493e-05 4.3644165207985814 0.10800928297030521 KLEELK ddPTM_KYSE-520_SHP099_60min_R1 2 KLEELK 6 1 Q9Y2S6;Q9Y2C4-3;Q9Y2C4-4;Q9Y2C4;Q15172-2;Q15172 Q9Y2S6 TMA7;EXOG;PPP2R5A Translation machinery-associated protein 7;Nuclease EXOG, mitochondrial;Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform 0 ; 102.72 0.027608999999999998 1647930000.0 2526500.0 2342700.0 1699920.0 1488180.0 2299400.0 2283000.0 1679930.0 2122600.0 2106700.0 1937590.0 False True 2386350.008547117 2230153.175535611 1809499.563168169 1629616.179762369 2480349.698203654 2268750.950164152 1849753.718936826 2115237.1960185654 1724176.3855852522 1920424.4600222108 1.2426159207113605 1.1612813843819807 0.9422393855300307 0.8485708309211608 1.2915632714733114 1.1813799487525338 0.9632004577339286 1.1014425404652999 0.8978100526616449 1.0 20.87299378583845 -4.5677415467549185 6.2638132012698735 1.0382186190690488 1.223903832431687 0.2381501692465412 0.12691754706938344 0.25360519465389086 24.119406892762367 0.034015555696515404 0.09454264133502199 2.70556799727188e-05 4.5677415467549185 0.18568521336263832 KLEEQAR ddPTM_KYSE-520_SHP099_60min_R1 6 KLEEQAR 7 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 0 ;;;;; 107.47 0.008560700000000001 5536940000.0 6833680.0 6213760.0 3873230.0 3981330.0 7154400.0 7027860.0 5219360.0 6016420.0 5866310.0 6487520.0 False True 6454602.147796652 5915241.642556085 4122904.603187119 4359714.406169488 7717410.577032372 6983996.518887703 5746983.844844803 5995550.443262986 4801135.98164077 6430045.620014182 1.0038190285471746 0.9199377410549442 0.6411936783705161 0.6780223133408924 1.2002108590040377 1.0861503839334035 0.893770306536663 0.9324273570627889 0.746672149058591 1.0 22.61639754257487 -4.299593835093483 5.3374495780386 0.8972005010755494 1.0057182807748484 0.03470254107813697 0.16608663191595194 0.678080872242736 51.51721860716186 0.045099014428041706 0.21896524147934898 5.0165617784341504e-05 4.299593835093483 0.10851777969929899 KLEESASFESLSPS(ph)S(ph)RPASPTR ddPTM_KYSE-520_SHP099_60min_R1 1 KLEESASFESLSPSSRPASPTR 22 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 2 KLEESASFES(0.001)LS(0.028)PS(0.807)S(0.822)RPAS(0.266)PT(0.077)R 54.605 0.043443 758080000.0 334550.0 295290.0 308230.0 311990.0 279180.0 313320.0 316820.0 324180.0 376950.0 297060.0 True False 315991.8445911094 281103.825160674 328098.9989854368 341641.4357967858 301149.87768308935 311364.4536598468 348847.25746523135 323055.4952441808 308505.3821362128 294428.279509183 1.0732387701272215 0.9547446516662016 1.1143596652209613 1.1603553719986 1.0228293225946616 1.05752223997945 1.1848293175056612 1.0972298441668709 1.0478116526391301 1.0 18.167556721742944 -4.779307643869521 24.99729319270082 1.0920563751219887 1.013991673775777 0.17460979917704633 0.06101899585652918 321.85823004018073 450273.05032003496 0.0158231547401097 0.033046499479241334 1.6622347457070437e-05 4.779307643869521 -0.07806470134621168 KLEESASFESLSPS(ph)SRPAS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 1 KLEESASFESLSPSSRPASPTR 22 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 2 KLEESASFESLS(0.001)PS(0.55)S(0.454)RPAS(0.97)PT(0.026)R 126.68 4.9541000000000006e-05 1062800000.0 600300.0 663150.0 628720.0 589720.0 629160.0 682090.0 568990.0 707150.0 819800.0 709120.0 True False 567000.1623316176 631291.2785915566 669248.2971875683 645766.8114942164 678671.3125692839 677832.8233015618 626509.0620072663 704697.0617000501 670944.9854762375 702837.7484870118 0.8067298086253766 0.8982034330832797 0.9522088115333147 0.918799271786908 0.9656159106852888 0.9644229052305774 0.8913992786470888 1.0026454373246754 0.9546228655483725 1.0 19.422832153108814 -3.109756381056175 0.813277928226824 0.958736929566625 2.476024488205726e-13 0.6929152929332323 0.030979886923914842 7.620374889112479 0.925568574606929 0.01075030537783836 10.135864346691394 0.0007766826772011271 3.109756381056175 -0.9587369295663775 KLEESASFESLSPSSRPAS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 KLEESASFESLSPSSRPASPTR 22 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KLEESASFESLSPS(0.034)S(0.02)RPAS(0.937)PT(0.008)R;KLEESASFESLS(0.014)PS(0.061)S(0.061)RPAS(0.837)PT(0.027)R 222.63 6.9923e-20 2632300000.0 1935700.0 1720090.0 1832590.0 1497680.0 1518840.0 1648290.0 1432110.0 1673160.0 2185480.0 1588030.0 True False 1828322.8622777185 1637454.2944922708 1950721.6836476706 1640019.0569060904 1638364.0669825354 1638002.4107078677 1576881.6548467034 1667356.1984784803 1788651.9234674408 1573961.2896686445 1.1616059901083229 1.0403396228613684 1.239370813279876 1.041969118091432 1.0409176373883053 1.0406878628207592 1.0018554237624697 1.0593374877913913 1.1364014701047658 1.0 20.585968628663963 -5.390524807899093 18.335313935895382 1.0460704977089679 1.137195202065434 0.39204880189017344 0.05736301666510929 2.5710054274869325 360.64245000721394 0.01567248127507486 0.023246027200128673 4.068882907508973e-06 5.390524807899093 0.09112470435646602 KLEEVLS(ph)TEGAEENGNSDK ddPTM_KYSE-520_SHP099_60min_R1 6 KLEEVLSTEGAEENGNSDK 19 1 O15355 O15355 PPM1G Protein phosphatase 1G 1 KLEEVLS(0.776)T(0.224)EGAEENGNSDK;KLEEVLS(0.711)T(0.289)EGAEENGNSDK;KLEEVLS(0.595)T(0.405)EGAEENGNSDK;KLEEVLS(0.819)T(0.181)EGAEENGNSDK;KLEEVLS(0.921)T(0.079)EGAEENGNSDK;KLEEVLS(0.958)T(0.042)EGAEENGNSDK 198.67 2.8215e-13 2892360000.0 3104830.0 2572000.0 2289540.0 2606120.0 2406330.0 2520200.0 2472260.0 2721270.0 3046830.0 2407230.0 True False 2932598.8905748394 2448437.2593492926 2437127.4117935225 2853804.861241454 2595694.4808551776 2504470.4969792776 2722180.1677324437 2711830.549519196 2493602.4763339385 2385903.8149966006 1.2291354211942604 1.0262095412059942 1.0214692631257623 1.1961106073530126 1.087929221848734 1.0496946613008562 1.1409429628395653 1.1366051441277651 1.0451395654176827 1.0 21.186104452917053 -7.969408504316252 4.857594225729406 1.0002897848946084 1.1059395996514538 0.23812280089311 0.06519118792924207 0.24015998265534902 14.120659401416923 0.061888313799763936 0.01615286859033896 1.072979675732538e-08 7.969408504316252 0.10564981475684543 KLEEVLS(ph)TEGAEENGNSDKK ddPTM_KYSE-520_SHP099_60min_R1 8 KLEEVLSTEGAEENGNSDKK 20 2 O15355 O15355 PPM1G Protein phosphatase 1G 1 KLEEVLS(0.973)T(0.027)EGAEENGNSDKK;KLEEVLS(0.795)T(0.205)EGAEENGNSDKK;KLEEVLS(0.897)T(0.103)EGAEENGNSDKK;KLEEVLS(0.865)T(0.135)EGAEENGNSDKK;KLEEVLS(0.972)T(0.028)EGAEENGNSDKK;KLEEVLS(0.957)T(0.043)EGAEENGNSDKK;KLEEVLS(0.713)T(0.287)EGAEENGNSDKK;KLEEVLS(0.874)T(0.121)EGAEENGNS(0.005)DKK 224.08 2.8059e-19 9800800000.0 6059920.0 5339000.0 4858450.0 4600860.0 4463600.0 4347130.0 4473080.0 4880210.0 6074800.0 4212150.0 True False 5723764.1574489735 5082506.425997619 5171633.460794855 5038124.351101005 4814859.9255900765 4319997.949184005 4925262.579453871 4863281.690559573 4971769.45324597 4174833.6280031116 1.371016109254332 1.217415322111569 1.2387639656118532 1.2067844613752474 1.1533058211694773 1.03477128290986 1.1797506244122358 1.1649043109020267 1.190890439297349 1.0 21.99328727497376 -1.0000000000000306 0.36724665970650927 1.111723451953301 4.299938278749777 0.6143899448749137 0.06097849427142645 47.2656564550696 0.6559717944276433 0.049431940679224406 106.02540395778142 0.09999999999999294 1.0000000000000306 3.188214826796476 KLEEVLST(ph)EGAEENGNSDK ddPTM_KYSE-520_SHP099_60min_R1 2 KLEEVLSTEGAEENGNSDK 19 1 O15355 O15355 PPM1G Protein phosphatase 1G 1 KLEEVLS(0.297)T(0.703)EGAEENGNSDK;KLEEVLS(0.476)T(0.524)EGAEENGNSDK 231.21 1.4859000000000002e-19 1536360000.0 1177660.0 915350.0 831840.0 823640.0 822630.0 866090.0 980760.0 962770.0 1215290.0 911550.0 True False 1112332.852192993 871375.2120316384 885461.7373910595 901918.4979636051 887366.3008755648 860684.411050226 1079904.792095196 959430.3755822072 994623.970967817 903474.3761751687 1.2311725506837508 0.9644714172421567 0.9800629223593865 0.9982778944787009 0.9821709660789751 0.9526384297625653 1.195279933302525 1.0619342406188945 1.1008878582462154 1.0 19.785124159213204 -6.742257682456942 24.999885155365032 1.094686767022197 1.0114257308130004 0.13470953605063052 0.08726823040067659 426.9765381125084 556486.5932311041 0.03265308203509801 0.025252239880284216 1.8102656785012032e-07 6.742257682456942 -0.08326103620919656 KLEFGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KLEFGSPK 8 1 Q8WYL5-4;Q8WYL5;Q8WYL5-2;Q8WYL5-5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 KLEFGS(1)PK;KLEFGS(1)PK 124.1 0.00094362 7267400000.0 8731100.0 8282400.0 7593100.0 7537600.0 9168900.0 8849700.0 7852600.0 8198600.0 9891500.0 8373100.0 True False 8246768.477983666 7884501.071864138 8082563.375389551 8253971.237737933 9890440.266095283 8794465.73967047 8646417.441990642 8170160.970167626 8095452.944423281 8298920.848173217 0.9937157648393489 0.9500634137991204 0.9739294449553292 0.9945836800642365 1.191774261622509 1.0597119674428916 1.0418725036875025 0.9844847444190368 0.9754826070193543 1.0 22.98449231684283 -5.537982093674504 24.999449828074006 1.0469275095525743 0.97264181688487 0.232667727978761 0.05773282840474096 349.2002593602456 578002.1169093536 0.01843055909360998 0.023801861821871974 2.897463050068623e-06 5.537982093674504 -0.07428569266770435 KLEGDSTDLSDQIAELQAQIAELK ddPTM_KYSE-520_SHP099_60min_R1 2 KLEGDSTDLSDQIAELQAQIAELK 24 1 P35579 P35579 MYH9 Myosin-9 0 ; 232.59 6.9611e-28 227610000.0 463790.0 391420.0 286285.0 403460.0 466110.0 429890.0 317030.0 379640.0 393030.0 315679.0 False True 438062.6441575566 372615.5956666017 304739.389172196 441804.7170953277 502790.2051968804 427206.89705040125 349078.4863146338 378323.1174486418 321665.65948002646 312882.3296545455 1.4000875173782523 1.1909128779436278 0.973974431565566 1.4120475182575054 1.6069626103590215 1.3653915755551995 1.1156861645080838 1.2091546296857023 1.0280723102361793 1.0 18.25526065765734 -7.409549299579096 1.3735797738136613 1.0135026769963986 1.310296870215486 0.33359730148518574 0.162603607832693 0.613688227640325 2.0313471480356595 0.15982978195621683 0.056204219848727845 3.894490963053792e-08 7.409549299579096 0.2967941932190874 KLEGNSPQGS(ph)NQGVK ddPTM_KYSE-520_SHP099_60min_R1 1 KLEGNSPQGSNQGVK 15 1 P61006 P61006 RAB8A Ras-related protein Rab-8A 1 KLEGNSPQGS(1)NQGVK 125.28 5.5669e-05 606230000.0 308480.0 202050.0 202890.0 185190.0 238730.0 206640.0 235120.0 283530.0 308920.0 190660.0 True False 291367.99946036586 192343.2147167669 215968.61403547807 202790.40192059622 257516.69281210678 205350.28311078378 258888.22415006976 282546.5006063997 252827.91523947185 188970.90073123525 1.5418670193818114 1.017845678739331 1.1428670403738004 1.0731303133756864 1.3627319963847826 1.0866767439651683 1.3699898934083758 1.495185234938647 1.3379198292495709 1.0 17.527804568127127 -6.782405439336961 24.91294198888556 1.3420392295676213 1.1941786812116855 0.04098336280877579 0.1872099814386722 499.198952660161 593167.8751894765 0.07491505027830066 0.05056813475682511 1.6504203147738503e-07 6.782405439336961 -0.14786054835593587 KLEHLITELVHQR ddPTM_KYSE-520_SHP099_60min_R1 1 KLEHLITELVHQR 13 1 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 78.324 0.014473 52526000.0 45714.0 42484.0 47392.0 40509.0 58453.0 39757.0 32783.0 32681.0 34777.0 17904.0 False True 43178.15329140031 40443.004870215926 50446.96414988103 44358.963180525025 63052.91854792482 39508.86181588966 36097.025571247636 32567.637238802734 28462.37345682741 17745.384489101212 2.4332047196790407 2.2790717718770783 2.8428217027849882 2.4997465232590046 3.553201035832749 2.2264303058722144 2.034164184687999 1.8352736881415554 1.6039310658108485 1.0 14.115156213148657 -7.41438866549814 0.9396117159192667 1.1089007694039972 2.680700908176379 0.700879573908441 0.36038205331409423 0.32355674631047904 0.5232474748242629 0.3465740742312351 0.13507262465483016 3.8513353376500195e-08 7.41438866549814 1.5718001387723817 KLEKEEEEGIS(ph)QES(ph)S(ph)EEEQ ddPTM_KYSE-520_SHP099_60min_R1 7 KLEKEEEEGISQESSEEEQ 19 2 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 3 KLEKEEEEGIS(1)QES(1)S(1)EEEQ;KLEKEEEEGIS(1)QES(1)S(1)EEEQ;KLEKEEEEGIS(1)QES(1)S(1)EEEQ;KLEKEEEEGIS(1)QES(1)S(1)EEEQ;KLEKEEEEGIS(1)QES(1)S(1)EEEQ;KLEKEEEEGIS(1)QES(1)S(1)EEEQ;KLEKEEEEGIS(1)QES(1)S(1)EEEQ 76.04899999999999 0.004372399999999999 31458550000.0 7801940.0 9318590.0 9552730.0 6301780.0 6983080.0 6306450.0 4769180.0 5338910.0 12048710.0 6428200.0 True False 7369150.835418196 8870910.948911248 10168514.260708408 6900699.27650076 7532608.667709823 6267089.106291151 5251295.257111388 5320390.567320963 9860967.987262012 6371251.149063924 1.1566253884844715 1.3923342121295246 1.595999596123657 1.083099553768905 1.1822809196301307 0.9836512420659987 0.8242172744803692 0.8350621318863948 1.54772865745699 1.0 22.603145277646888 -5.393115982452365 6.959619889247045 1.0465059735959483 1.381740045106215 0.3092566782994549 0.21606666938563615 0.29684257766154576 15.447184859608086 0.062066420668998964 0.09229554078934699 4.0446786030195e-06 5.393115982452365 0.33523407151026663 KLEKEEEEGISQES(ph)S(ph)EEEQ ddPTM_KYSE-520_SHP099_60min_R1 4 KLEKEEEEGISQESSEEEQ 19 2 P17096;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 2 KLEKEEEEGIS(0.012)QES(0.994)S(0.994)EEEQ;KLEKEEEEGIS(0.018)QES(0.991)S(0.991)EEEQ;KLEKEEEEGIS(0.134)QES(0.88)S(0.986)EEEQ;KLEKEEEEGIS(0.173)QES(0.865)S(0.962)EEEQ 76.237 0.0067613 5191620000.0 6427360.0 7719910.0 8269080.0 4761410.0 6054610.0 5355950.0 3910590.0 4341790.0 10226700.0 5412000.0 True False 6070821.528175494 7349033.935778853 8802118.127795804 5213932.974829885 6531073.360981495 5322521.529361221 4305910.6008804925 4326729.343871405 8369789.074127632 5364053.89047229 1.1317599808157361 1.3700522190562463 1.6409451335733696 0.972013533288871 1.2175629653128732 0.992257281161019 0.802734403643616 0.8066155620763998 1.5603476857296628 1.0 22.35489230081089 -5.284191163638761 24.87975574075162 1.036406835232802 1.3798324575929037 0.2926097165460836 0.23494148919677038 886.4391675301455 969345.7115319648 0.06678343831082323 0.09913451204521163 5.197671599796086e-06 5.284191163638761 0.34342562236010177 KLELDGEKETAPEEPGS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 7 KLELDGEKETAPEEPGSPAK 20 2 P35612 P35612 ADD2 Beta-adducin 1 KLELDGEKETAPEEPGS(1)PAK;KLELDGEKETAPEEPGS(1)PAK;KLELDGEKETAPEEPGS(1)PAK;KLELDGEKETAPEEPGS(1)PAK;KLELDGEKETAPEEPGS(1)PAK;KLELDGEKETAPEEPGS(1)PAK;KLELDGEKET(0.011)APEEPGS(0.989)PAK 210.39 7.490899999999999e-19 39530120000.0 18827600.0 16571810.0 15398240.0 16490480.0 16978710.0 16603390.0 17186690.0 16898850.0 19127490.0 15819300.0 True False 17783195.496109918 15775675.372806063 16390835.18845509 18057730.261156417 18314837.881354865 16499762.084295196 18924088.35113033 16840231.833571225 15654419.980784182 15679153.309229176 1.1341936101640286 1.0061560762672095 1.0453903259436208 1.1517031503561577 1.1681012054760798 1.0523375694389687 1.206958563252972 1.074052373967069 0.9984225341791616 1.0 23.902344318718406 -7.670793418518749 4.284369971462532 0.9987048077173601 1.106615393578567 0.35733808647163723 0.05798935116292267 0.24924858118752974 8.013472237208742 0.047007302345850606 0.015592281921926108 2.1340597830435035e-08 7.670793418518749 0.10791058586120683 KLELDGEKETAPEEPGS(ph)PAKS(ph)APAS(ph)PVQSPAK ddPTM_KYSE-520_SHP099_60min_R1 3 KLELDGEKETAPEEPGSPAKSAPASPVQSPAK 32 3 P35612 P35612 ADD2 Beta-adducin 3 KLELDGEKET(0.001)APEEPGS(0.999)PAKS(1)APAS(0.982)PVQS(0.018)PAK;KLELDGEKETAPEEPGS(1)PAKS(0.998)APAS(0.987)PVQS(0.014)PAK;KLELDGEKET(0.01)APEEPGS(0.992)PAKS(0.998)APAS(0.995)PVQS(0.006)PAK 92.23 0.0011298 2329510000.0 658920.0 554040.0 619430.0 544912.0 508810.0 475270.0 526330.0 655410.0 697910.0 679150.0 True False 622368.3940755454 527423.0867690049 659359.4489230423 596700.2726462327 548850.4522671137 472303.66363754467 579536.5728857878 653136.5356838438 571187.1368793861 673133.2593707046 0.9245842266914309 0.783534433081021 0.9795377657307571 0.8864519236563542 0.8153667117566293 0.7016495724473479 0.8609537039182732 0.9702930684103244 0.8485498657626495 1.0 19.360532616125305 -8.224826955246979 0.9624711415226419 0.9962898899760899 0.85327930780719 0.20555609583962486 0.0802428047961465 1.4444733471667714 2.683587124277776 0.0808894476374036 0.02686204223504546 5.958995325608917e-09 8.224826955246979 -0.14301058216889995 KLELSDNIISGGLEVLAEK ddPTM_KYSE-520_SHP099_60min_R1 3 KLELSDNIISGGLEVLAEK 19 1 Q5TB19;Q9BTT0-3;Q9BTT0;E9PLC4 Q5TB19 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E 0 ;; 218.25 2.6849000000000003e-18 515647000.0 877840.0 691476.0 483998.0 877711.0 804094.0 631739.0 562387.0 705814.0 572088.0 410916.0 False True 829144.4652693452 658256.4550333639 515197.2855041802 961128.3895465658 867371.6231309768 627796.0825693158 619238.5663281953 703365.6959722266 468211.2403648814 407275.60392781097 2.035831405743394 1.6162432728232818 1.264984400085742 2.359896788016118 2.129692067891985 1.5414527079814773 1.5204410977632592 1.727001787460113 1.1496176933982798 1.0 18.6356458729999 -7.7333772574708375 0.9281451188310093 0.9839190290849229 1.824498461769648 0.45531641979488713 0.307614904546113 0.5379054623137836 0.975435489312908 0.30819232598219437 0.11122238438879345 1.8476629170735354e-08 7.7333772574708375 0.8405794326847251 KLELSDNR ddPTM_KYSE-520_SHP099_60min_R1 5 KLELSDNR 8 1 P39687;H0YN26 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 0 ;;;; 113.74 0.0048984 2678990000.0 13727440.0 13283520.0 9315550.0 8251430.0 13339810.0 13510720.0 9763260.0 11961650.0 11689150.0 11556430.0 False True 12965951.538226813 12645359.760229988 9916045.258406987 9035643.426317101 14389577.153863663 13426394.58493288 10750225.601035278 11920157.82802011 9566695.01949202 11454049.02096648 1.1319972102871934 1.1040078261480137 0.8657240108066416 0.7888602021675898 1.2562873729214656 1.1721963613352842 0.9385524351569596 1.040693802357614 0.8352238585656755 1.0 23.449354347237495 -7.733693122560951 24.29180548483849 0.91761188241292 1.0340195796993756 0.10521876344733982 0.1393393024688126 346.2513422764417 303144.1502103445 0.10030349829192564 0.037889327790458116 1.8463195888546658e-08 7.733693122560951 0.11640769728645561 KLELSENR ddPTM_KYSE-520_SHP099_60min_R1 4 KLELSENR 8 1 Q92688;Q92688-2 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 0 ;;; 155.84 0.00072936 9414220000.0 3936910.0 3747680.0 2663660.0 2405960.0 3766410.0 3622140.0 2668240.0 3247740.0 3228830.0 3109810.0 False True 3718521.7542644865 3567635.8274176354 2835363.7856066846 2634621.715021751 4062805.0390585526 3599532.880695389 2937971.738712926 3236474.3479682137 2642555.864180579 3082259.502795569 1.2064272170762507 1.1574741919626936 0.9198978162075733 0.8547695976384154 1.3181255619047136 1.1678227863133068 0.9531876651035462 1.050033050440034 0.8573437316954705 1.0 21.55555690023453 -6.7776894141645485 24.817148868742652 0.9693104860184121 1.0965372155736175 0.20337414270258913 0.134119242848074 451.2476659540735 689141.4147124449 0.06047583691933594 0.040913749554785044 1.6684399713700646e-07 6.7776894141645485 0.12722672955520542 KLEMDLK ddPTM_KYSE-520_SHP099_60min_R1 2 KLEMDLK 7 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 112.84 0.0070309 2583400000.0 6063600.0 5601200.0 3583900.0 3794900.0 5918200.0 6288100.0 4246200.0 5503200.0 5007500.0 5143800.0 False True 5727240.020513075 5332109.9444273915 3814923.9284427427 4155566.1550217154 6383928.670048216 6248853.635447733 4675447.334918449 5484110.683656536 4098264.2288024626 5098229.933815844 1.1233781321876237 1.0458747474413137 0.7482840079728235 0.815099791293921 1.2521853178305107 1.2256908214358797 0.9170726694586413 1.075689161699279 0.8038602185474709 1.0 22.281565010729647 -4.52326147367425 24.99999681716086 0.9864514274460207 1.1040023618280264 0.0708446241032199 0.16143432416407527 35.880828411586926 2343975.9744006624 0.044341995576731325 0.11970234379097681 2.9973573705155972e-05 4.52326147367425 0.1175509343820057 KLENS(ph)PLGEALR ddPTM_KYSE-520_SHP099_60min_R1 8 KLENSPLGEALR 12 1 D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;D6RDK6;D6RBN5;Q9NX40-3;Q9NX40-2;Q9NX40-4;Q9NX40 D6RI08 OCIAD1 OCIA domain-containing protein 1 1 KLENS(1)PLGEALR;KLENS(1)PLGEALR;KLENS(1)PLGEALR;KLENS(1)PLGEALR;KLENS(1)PLGEALR;KLENS(1)PLGEALR;KLENS(1)PLGEALR;KLENS(1)PLGEALR 232.15 5.082e-13 20665800000.0 21086820.0 23306950.0 20130660.0 20004390.0 22011600.0 20970940.0 20543820.0 18945010.0 27274800.0 20092590.0 True False 19917092.059066486 22187249.13755483 21428314.553794824 21905601.211060826 23743787.691127956 20840052.584684774 22620589.813961755 18879294.18210858 22322383.86175562 19914585.284398496 1.0001258763178942 1.1141205714656177 1.0760110867376291 1.0999777749939956 1.1922813029769361 1.04647183393828 1.135880536346554 0.9480134239551057 1.120906287676673 1.0 24.2473221005106 -9.961199094422215 4.807778977219948 0.9999991616614385 1.0827683121674618 0.11969466974956078 0.06625661098565057 42858408.780450605 3.291167325319063 397.8237636660802 0.01554963060941921 1.0934549767679575e-10 9.961199094422215 0.08276915050602329 KLEPGGFGEKPVRPGGGDT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 KLEPGGFGEKPVRPGGGDTSPR 22 3 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 KLEPGGFGEKPVRPGGGDT(0.5)S(0.5)PR 86.131 0.0021339 4789000000.0 1695000.0 1429500.0 1390300.0 1522700.0 1571700.0 1394800.0 1337000.0 1491200.0 1978100.0 1374300.0 True False 1600974.9711012698 1360824.6742767543 1479920.9625586504 1667416.9501835501 1695383.8482502752 1386094.5358252085 1472157.0078625535 1486027.3752486948 1618926.903843065 1362124.7711892212 1.1753511902610194 0.9990455375748495 1.0864797365564285 1.2241293789318504 1.2446611970576658 1.0175973340643825 1.0807798514502216 1.090962741945658 1.188530550273775 1.0 20.377427430186152 -6.2938301703382935 24.984705209483675 1.0815846473388946 1.1388142962430654 0.15649382947647483 0.08022957950762405 1701.3369821457366 1312324.7847898698 0.03032300766344122 0.026744405884728373 5.08358195770226e-07 6.2938301703382935 0.057229648904170816 KLERPPET(ph)PTVDPTVK ddPTM_KYSE-520_SHP099_60min_R1 2 KLERPPETPTVDPTVK 16 2 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y4X2;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 KLERPPET(0.999)PT(0.001)VDPTVK;KLERPPET(0.816)PT(0.184)VDPTVK 170.06 3.0278e-08 1963470000.0 2355800.0 2039970.0 1853770.0 1876060.0 1911580.0 2017010.0 2039320.0 2574900.0 2917900.0 2329000.0 True False 2225119.077829129 1941966.7791426035 1973266.980336871 2054360.178341992 2062010.4705976096 2004421.0924181296 2245474.3674452207 2565968.2728861803 2388082.914273128 2308366.871934582 0.9639364976522622 0.8412730241251001 0.8548324810618719 0.8899625979384664 0.8932767558171949 0.8683286512157734 0.9727545455386593 1.1115946533818124 1.0345335238118964 1.0 21.138441101045217 -6.97009378269927 3.837699275824008 1.0544034068978936 0.8830292259844179 0.767133516690333 0.040477252092801695 0.09463509583691335 3.0270169442875465 0.01818285959871727 0.011263244454621244 1.071287943505653e-07 6.97009378269927 -0.17137418091347567 KLES(ph)S(ph)EENLSSEDEELPCFQHLLFGK ddPTM_KYSE-520_SHP099_60min_R1 1 KLESSEENLSSEDEELPCFQHLLFGK 26 1 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2 P38398 BRCA1 Breast cancer type 1 susceptibility protein 2 KLES(0.648)S(0.667)EENLS(0.576)S(0.109)EDEELPCFQHLLFGK 59.573 0.018731 47834000.0 51264.0 50167.0 45469.0 42590.0 45654.0 51801.0 42590.0 46111.0 54927.0 51985.0 True False 48420.2837277496 47756.90201779779 48400.00449297224 46637.740794849604 49246.71006427317 51477.69074439467 46895.41283834418 45951.0517033883 44953.64139699104 51524.45334371798 0.9397534682171093 0.9268783833418479 0.9393598835507747 0.9051574110593804 0.9557929656380815 0.9990924193021252 0.9101583771400035 0.8918299704579165 0.8724719716501743 1.0 15.652969672909501 -10.017158516288607 4.607243901297474 1.0000020279156376 0.9279339400440834 0.298518146349507 0.033653067586500385 48864590.94816974 15.369049663248783 1107.0892551863974 0.008814859165740778 9.612613565997202e-11 10.017158516288607 -0.07206808787155428 KLES(ph)TESR ddPTM_KYSE-520_SHP099_60min_R1 4 KLESTESR 8 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 KLES(0.909)T(0.09)ES(0.001)R;KLES(0.946)T(0.051)ES(0.003)R;KLES(0.829)T(0.118)ES(0.053)R;KLES(0.499)T(0.499)ES(0.002)R 96.64 0.0021449999999999998 2911090000.0 4915880.0 4593150.0 4950300.0 5467860.0 5452930.0 6120110.0 6366810.0 7092960.0 8120840.0 6141050.0 True False 4643186.336836169 4372488.179541294 5269404.25876005 5987523.770427942 5882044.568072392 6081912.123350456 7010429.288877618 7068356.177269314 6646300.165717066 6086645.0746646095 0.7628482160333656 0.7183741003301775 0.8657321388253295 0.9837149524868379 0.9663853396933134 0.9992224039259568 1.1517723151064319 1.1612893622943505 1.09194804102871 1.0 22.537215810948954 -5.297881246036799 0.7421792373169112 1.1066321680573536 0.6872389520815373 0.839226544254511 0.05720731849598318 0.3610640660042382 0.35216269207113476 0.030041295630985388 0.10161241408529503 5.0363830537603705e-06 5.297881246036799 -0.41939321597581636 KLESSEENLS(ph)S(ph)EDEELPCFQHLLFGK ddPTM_KYSE-520_SHP099_60min_R1 5 KLESSEENLSSEDEELPCFQHLLFGK 26 1 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2 P38398 BRCA1 Breast cancer type 1 susceptibility protein 2 KLESSEENLS(1)S(1)EDEELPCFQHLLFGK;KLESS(0.001)EENLS(0.999)S(1)EDEELPCFQHLLFGK;KLESSEENLS(0.999)S(1)EDEELPCFQHLLFGK;KLESSEENLS(1)S(1)EDEELPCFQHLLFGK;KLES(0.125)S(0.127)EENLS(0.875)S(0.873)EDEELPCFQHLLFGK 196.93 8.4096e-16 2225083000.0 1445472.0 1333221.0 1369733.0 1285812.0 1369677.0 1341693.0 1224621.0 1311313.0 1738104.0 1280524.0 True False 1365288.786683005 1269171.0619544813 1458028.1808302898 1408015.1858865253 1477462.7875039096 1333318.996311252 1348417.6418292057 1306764.3612657557 1422508.1276362408 1269179.5535925974 1.0757254817242812 0.9999933093484747 1.1487958316875881 1.1093900637627934 1.164108563931507 1.0505361456045352 1.0624325281732703 1.0296134676663906 1.1208092059233263 1.0 20.27546475414795 KLESTES(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 KLESTESR 8 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 KLES(0.253)T(0.253)ES(0.494)R 62.166000000000004 0.03414 1159900000.0 1163300.0 1179400.0 1198400.0 1340900.0 1425700.0 1644700.0 1864800.0 2136900.0 2325200.0 1891000.0 True False 1098769.4300189435 1122739.8536845087 1275650.7815077952 1468338.7328437131 1537894.4788766415 1634434.8172295121 2053312.182694157 2129487.5926562073 1903002.293522014 1874247.2111757358 0.5862457329359841 0.5990350936577901 0.6806203439446846 0.7834285275113778 0.8205398251129868 0.8720486857249814 1.0955396761167338 1.136182879162646 1.0153422036190412 1.0 20.83787982478411 -5.946180538417548 0.7854525982704584 1.082422393156094 0.5846906033829429 0.9101480012671088 0.05673669018176409 0.18564147706963485 0.2538858637454659 0.03617526472123064 0.049549068861414726 1.1319297164963648e-06 5.946180538417548 -0.497731789773151 KLESTESR ddPTM_KYSE-520_SHP099_60min_R1 2 KLESTESR 8 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ; 123.35 0.0022096 1885230000.0 3158900.0 3178100.0 1962010.0 2006130.0 3463100.0 3457000.0 2390750.0 2934900.0 2848900.0 3422900.0 False True 2983669.5198889705 3025419.3055746458 2088484.303926992 2196791.9920350225 3735626.2676563794 3435423.5806909623 2632430.3414715026 2924719.5169108124 2331611.5749246776 3392575.7689759047 0.8794702677457464 0.8917764883075581 0.615604321361238 0.6475292349028815 1.1011180065063157 1.0126298761274215 0.7759385554611026 0.8620940889976583 0.6872688286718814 1.0 21.693949606134144 KLET(ph)SKRPPSGTSTTSK ddPTM_KYSE-520_SHP099_60min_R1 1 KLETSKRPPSGTSTTSK 17 3 A0A0A0MRS7;Q68DC2 A0A0A0MRS7 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 1 KLET(0.231)S(0.231)KRPPS(0.231)GT(0.231)S(0.038)T(0.038)TSK 51.147 0.05134299999999999 1360600000.0 1304600.0 998180.0 934590.0 982690.0 1004100.0 1216700.0 962700.0 1054000.0 1356500.0 1087700.0 True False 1232231.2373443774 950225.9345012747 994835.1667968704 1076084.5621434783 1083116.9574525047 1209106.123988051 1060019.1110465827 1050343.9200054489 1110193.7945822342 1078063.8242177959 1.14300397589024 0.8814189968675782 0.9227980240582573 0.9981640585373007 1.0046872301260783 1.1215533782198235 0.9832619249752622 0.9742873254907152 1.0298034027695444 1.0 20.04001116128917 -5.629955689893161 3.53562956086365 1.0210479982434206 0.9711442737676296 0.038947255733932984 0.07385363346681623 0.6458383649933762 15.663822838540993 0.02268373128288685 0.030102192859847533 2.344468004010404e-06 5.629955689893161 -0.049903724475791056 KLETSKRPPSGT(ph)STTSK ddPTM_KYSE-520_SHP099_60min_R1 2 KLETSKRPPSGTSTTSK 17 3 A0A0A0MRS7;Q68DC2 A0A0A0MRS7 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 1 KLET(0.145)S(0.145)KRPPS(0.145)GT(0.188)S(0.188)T(0.188)T(0.001)SK;KLET(0.212)S(0.212)KRPPS(0.212)GT(0.28)S(0.042)T(0.042)TSK 60.474 0.018738 1855520000.0 1633290.0 1445860.0 1624110.0 1321420.0 1469720.0 1618200.0 1394960.0 1577720.0 1894650.0 1483180.0 True False 1542688.147817107 1376398.7153198929 1728802.7292678799 1447007.35950059 1585378.6024371034 1608100.2135591886 1535976.1702976425 1572247.257562618 1550629.320239756 1470040.1790965805 1.049419036128096 0.936300065053844 1.1760241344765985 0.9843318434941382 1.0784593679687073 1.0939158238160902 1.0448531898234124 1.0695267244524223 1.0548210465871088 1.0 20.487424156624733 -4.723926361800089 24.999997680557307 1.063460438945565 0.9928597038571962 0.20139331044286213 0.055648308555070566 243.74477079131307 162436.90103243644 0.01294972414082587 0.034259761444048326 1.8883115006928462e-05 4.723926361800089 -0.07060073508836884 KLEVNEAELLR ddPTM_KYSE-520_SHP099_60min_R1 2 KLEVNEAELLR 11 1 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 0 ; 150.69 0.00013258 1216860000.0 1677220.0 1559260.0 1244370.0 1204480.0 1691130.0 1630100.0 1209190.0 1392890.0 1457040.0 1515630.0 False True 1584181.26314482 1484350.809103024 1324584.0812623969 1318953.417059882 1824212.3097865286 1619925.9412451056 1331426.7257571574 1388058.3896929703 1192478.2649893826 1502202.697342298 1.0545722397833253 0.9881161921284939 0.8817612187794999 0.8780129468502346 1.2143582973282707 1.0783670832911456 0.8863162928097 0.9240153756538501 0.7938198134640013 1.0 20.518648063082036 -6.780793039457515 24.876055446845378 0.8947057605049515 1.0112642089096062 0.23016106966191818 0.10241222817506801 387.2508288360577 497744.58277748135 0.0460774445159922 0.031117533570883406 1.6565591991793792e-07 6.780793039457515 0.11655844840465468 KLFAPQQILQCS(ph)PAN ddPTM_KYSE-520_SHP099_60min_R1 4 KLFAPQQILQCSPAN 15 1 K7ERV3;P04183 K7ERV3 TK1 Thymidine kinase;Thymidine kinase, cytosolic 1 KLFAPQQILQCS(1)PAN;KLFAPQQILQCS(1)PAN;KLFAPQQILQCS(1)PAN;KLFAPQQILQCS(1)PAN 208.01 5.7323e-14 15670200000.0 12207800.0 12141640.0 12140390.0 10485370.0 10819090.0 10616820.0 9779900.0 10411600.0 12475260.0 10783460.0 True False 11530608.998354046 11558337.389426807 12922978.964710817 11481896.412258552 11670490.830798548 10550556.48827058 10768547.73462602 10375484.5896857 10210067.259712465 10687926.933804926 1.0788442950413326 1.0814386607442883 1.2091193217121112 1.074286574316145 1.0919321308125585 0.987147138412796 1.0075431654164941 0.9707667963998707 0.9552897697512289 1.0 23.349478714430525 -6.189466389382571 1.816797304553747 0.9787894083457165 1.1174389600284975 0.7171116090605265 0.038647081803494424 0.19197273628388542 1.2517172453505745 0.015893819964504063 0.01529253755911182 6.464480215207337e-07 6.189466389382571 0.13864955168278104 KLFEELVR ddPTM_KYSE-520_SHP099_60min_R1 2 KLFEELVR 8 1 P14618-2;H3BTN5;H3BR70 P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 140.75 0.0014985999999999999 323290000.0 1145660.0 1079010.0 791870.0 670750.0 1139700.0 1032120.0 795590.0 755790.0 880020.0 821170.0 False True 1082107.9559834101 1027172.7399729714 842915.2072367979 734497.8783316582 1229387.9059940453 1025678.1562345253 876016.0014101488 753168.3408927114 720230.5514988991 813895.0726605926 1.32954233577805 1.2620456548719259 1.0356558671394085 0.9024478744300688 1.5104992612563952 1.2602093202034284 1.076325475895173 0.9253875176202163 0.8849181862527958 1.0 19.63448328869537 -7.039730464480398 3.341966604197495 0.931264749204933 1.208676618122966 0.3931899706484445 0.1558163286820864 0.28532966682474764 6.444580630644128 0.08435871715431575 0.048025743054304 9.125770349276495e-08 7.039730464480398 0.27741186891803304 KLFIGGLSFETTDDSLR ddPTM_KYSE-520_SHP099_60min_R1 1 KLFIGGLSFETTDDSLR 17 1 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 111.01 0.001873 0.0 95548.0 78585.0 87172.0 72240.0 92214.0 101830.0 65502.0 93031.0 111170.0 65061.0 False True 90247.76196978423 74809.65864151018 92791.2466001315 79105.66788025206 99470.71717411149 101194.44119807934 72123.58139791548 92708.29717459851 90984.33036764245 64484.61015669205 1.3995240376035452 1.1601164752291926 1.4389673190960877 1.2267371654730037 1.5425497174039855 1.5692804989002114 1.118461927933834 1.4376809745662622 1.410946428094368 1.0 15.97666726876958 -10.642261184342424 6.187640542644251 0.9977684108896889 1.3648996385736485 0.36696904568549427 0.14463400179919078 0.004438886911450742 0.00025663413868192044 0.13961066212331774 0.03368883832598717 2.2789710884587813e-11 10.642261184342424 0.36713122768395956 KLFIGGLSFETTDESLR ddPTM_KYSE-520_SHP099_60min_R1 4 KLFIGGLSFETTDESLR 17 1 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646;F8VZ49;Q32P51 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 0 ;;; 164.57 8.6214e-06 285754000.0 530442.0 470397.0 345774.0 469066.0 484606.0 421875.0 346088.0 394599.0 382298.0 277601.0 False True 501017.32485008816 447798.42203970783 368063.14529796096 513645.8916101641 522741.73516903544 419241.9216384149 381073.95253338455 393230.2281690987 312882.32014832215 275141.6711103096 1.8209430902570212 1.627519452915501 1.3377222861687037 1.8668415058227714 1.8999002697757774 1.523731101677916 1.3850099514028344 1.4291918290030488 1.1371680592245934 1.0 18.069815131544132 -7.455818159353337 0.8968159820626331 1.0092948009561247 1.6882366650525078 0.6809088366092556 0.16376312474576257 0.36244289489232184 0.546784451266851 0.16295922179270309 0.06406528704571228 3.500917209955974e-08 7.455818159353337 0.6789418640963831 KLFIGGLSFETTEESLR ddPTM_KYSE-520_SHP099_60min_R1 1 KLFIGGLSFETTEESLR 17 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 95.87299999999999 0.0025642 39268000.0 61703.0 67390.0 58961.0 65218.0 60895.0 61039.0 49376.0 59326.0 66371.0 42114.0 False True 58280.211588118975 64152.48324554773 62761.720400935505 71416.2991114932 65687.09005484541 60658.03295973261 54367.4079433219 59120.21195279252 54319.69947675449 41740.90272419619 1.3962374501866093 1.536921318387302 1.5036023733275432 1.7109428510297862 1.5736863787751336 1.4532036683665355 1.3024971765118638 1.416361604429843 1.3013542096986483 1.0 15.34917418133225 -8.05341561180195 0.5556567838768712 0.9948819798694924 1.547946245214647 0.7538661926636763 0.09078954259924062 0.5162985721188404 0.3782660080807063 0.10929340374549375 0.04865636709329799 8.842689757030056e-09 8.05341561180195 0.5530642653451546 KLFVGGLK ddPTM_KYSE-520_SHP099_60min_R1 4 KLFVGGLK 8 1 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 0 ;;; 131.06 0.013272999999999998 0.0 6209040.0 5490410.0 4685180.0 3931760.0 5984200.0 5672730.0 4300690.0 4439240.0 5355250.0 4414240.0 False True 5864612.173785631 5226642.462326578 4987194.1993530495 4305433.28827325 6455122.494559594 5637324.387877646 4735445.715889611 4423841.312566402 4382871.594866575 4375133.267826752 1.3404419510856966 1.1946247445218494 1.1398953801081184 0.9840690613778437 1.4754116273505036 1.2884920396214259 1.082354622363729 1.0111329282465138 1.001768706589289 1.0 22.060895531847315 -6.93433013544728 4.385822423250815 1.0108575901674999 1.229461308450702 0.4354348755078792 0.12098471679251524 0.22925561047594797 8.741168062363581 0.05720826504987258 0.037087317745186504 1.1632414378547518e-07 6.93433013544728 0.21860371828320213 KLFYSTFATDDRK ddPTM_KYSE-520_SHP099_60min_R1 1 KLFYSTFATDDRK 13 2 P30084 P30084 ECHS1 Enoyl-CoA hydratase, mitochondrial 0 117.92 7.622899999999999e-05 463500000.0 451750.0 518920.0 301790.0 308520.0 606760.0 526310.0 340010.0 289650.0 408150.0 304760.0 False True 426690.5269587019 493990.3042852005 321243.8662810724 337841.6480400799 654508.5600078503 523025.1040652188 374381.528977821 288645.2717548184 334040.24862420827 302060.06349969225 1.4126015932560931 1.6354042257747978 1.0635098945524775 1.1184585083040086 2.166815938607247 1.7315268294835398 1.239427432545059 0.9555889925021898 1.1058735959795247 1.0 18.204475926958132 -6.981235065371482 5.494277143045606 1.034147306284199 1.5164364341757912 0.3703211255432668 0.29512193767282013 0.21008760795501902 19.57053835353355 0.14275621055396895 0.09161196228788224 1.0441549090263644e-07 6.981235065371482 0.4822891278915922 KLGAGEGGEAS(ph)VSPEK ddPTM_KYSE-520_SHP099_60min_R1 1 KLGAGEGGEASVSPEK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLGAGEGGEAS(0.592)VS(0.408)PEK 64.679 0.023499000000000003 0.0 45026.0 42331.0 45373.0 33358.0 34272.0 37976.0 32458.0 42027.0 49382.0 40396.0 True False 42528.31802289428 40297.35521987359 48297.81617936684 36528.33429055158 36969.0114189944 37738.977697518036 35739.17139955331 41881.21814617554 40415.47361891624 40038.12286761245 1.0621956020145038 1.006474638012334 1.2062957181850251 0.9123388329501332 0.9233452712364617 0.9425760998412281 0.8926285459916843 1.046033508730101 1.0094247862855987 1.0 15.289086716533818 -5.286652327565397 24.996168675604856 0.9576510207157883 1.0831372910794888 0.4620672478564375 0.06438509801057357 690.0772089994327 684142.2899114102 0.01858846958760961 0.027581884176760343 5.168299495257752e-06 5.286652327565397 0.12548627036370041 KLGAGEGGEASVS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 17 KLGAGEGGEASVSPEK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLGAGEGGEAS(0.003)VS(0.997)PEK;KLGAGEGGEAS(0.003)VS(0.997)PEK;KLGAGEGGEASVS(1)PEK;KLGAGEGGEAS(0.001)VS(0.999)PEK;KLGAGEGGEAS(0.001)VS(0.999)PEK;KLGAGEGGEAS(0.039)VS(0.961)PEK;KLGAGEGGEAS(0.017)VS(0.983)PEK;KLGAGEGGEAS(0.036)VS(0.964)PEK;KLGAGEGGEAS(0.001)VS(0.999)PEK;KLGAGEGGEAS(0.002)VS(0.998)PEK;KLGAGEGGEAS(0.213)VS(0.787)PEK;KLGAGEGGEAS(0.078)VS(0.922)PEK;KLGAGEGGEAS(0.007)VS(0.993)PEK;KLGAGEGGEAS(0.142)VS(0.858)PEK;KLGAGEGGEASVS(1)PEK;KLGAGEGGEAS(0.01)VS(0.99)PEK;KLGAGEGGEASVS(1)PEK 334.98 1.719e-58 49893253000.0 49986246.0 43227592.0 39576581.0 38732992.0 40738579.0 42632457.0 40498708.0 45921888.0 53806437.0 43668346.0 True False 47213409.28926905 41150873.59438155 42127750.7360285 42414163.91418129 43944473.39649287 42366372.022156045 44592712.63394114 45762595.688777216 44036544.390696615 43281478.42789913 1.0908455765419374 0.9507732889238784 0.9733436163971945 0.9799610700645852 1.0153182144574426 0.9788568588924816 1.0302955040740196 1.0573251504107302 1.0174454752985234 1.0 25.367246444433782 -6.779932291959282 23.509388826581507 1.031043671733219 0.9948496441989045 0.10781216031470653 0.03789030430727741 220.71341052062124 280580.30935926846 0.015398249881817217 0.010409306759895714 1.659845663056793e-07 6.779932291959282 -0.036194027534314444 KLGAGEGGEASVS(ph)PEKTSTTSK ddPTM_KYSE-520_SHP099_60min_R1 7 KLGAGEGGEASVSPEKTSTTSK 22 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLGAGEGGEASVS(0.998)PEKT(0.002)STTSK;KLGAGEGGEASVS(1)PEKTSTTSK;KLGAGEGGEAS(0.093)VS(0.907)PEKTSTTSK;KLGAGEGGEASVS(1)PEKTSTTSK;KLGAGEGGEAS(0.002)VS(0.998)PEKTSTTSK;KLGAGEGGEASVS(1)PEKTSTTSK;KLGAGEGGEASVS(1)PEKTSTTSK 304.9 7.3987e-46 13179150000.0 4330380.0 4801690.0 5126620.0 3211810.0 3121850.0 3377090.0 2615290.0 2876220.0 5597380.0 3257680.0 True False 4090165.1890014866 4571009.604916369 5457090.128082023 3517059.4567341083 3367521.8341032774 3356012.32864207 2879669.0359707195 2866243.0641347948 4581036.89046716 3228819.4896366866 1.2667679943488326 1.4156906632865711 1.6901192976557713 1.0892710069493092 1.04295760258874 1.0393929853971784 0.8918643625676163 0.8877061952005593 1.4187962210865581 1.0 21.622575357230108 -5.390463097590178 6.614290027541752 1.036194841303947 1.4516497928811531 0.5482920516130547 0.16837684205532538 0.17868726491663225 8.816158339259818 0.047730197566821564 0.07103728826398181 4.069461109332175e-06 5.390463097590178 0.41545495157720613 KLGDVS(ph)PTQIDVSQFGSFK ddPTM_KYSE-520_SHP099_60min_R1 7 KLGDVSPTQIDVSQFGSFK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.999)PT(0.001)QIDVSQFGSFK;KLGDVS(0.999)PT(0.001)QIDVSQFGSFK;KLGDVS(0.87)PT(0.13)QIDVSQFGSFK;KLGDVS(0.885)PT(0.114)QIDVS(0.001)QFGSFK;KLGDVS(0.799)PT(0.201)QIDVSQFGSFK;KLGDVS(0.773)PT(0.227)QIDVSQFGSFK;KLGDVS(0.523)PT(0.477)QIDVSQFGSFK 252.8 6.686199999999999e-27 135602600000.0 8202280.0 8051510.0 7710770.0 7404020.0 7056360.0 6994040.0 6341200.0 7485590.0 9682860.0 7200130.0 True False 7747283.177560198 7664703.374037105 8207818.571868206 8107695.834700217 7611655.386803654 6950387.602052598 6982230.380148102 7459624.235439842 7924696.7090368755 7136342.449816374 1.0856097828880877 1.0740380563203389 1.1501435966094091 1.1361136172646586 1.0666045583335915 0.9739425554376864 0.9784046140229387 1.0453007668699792 1.1104703515511347 1.0 22.76675341647669 -5.99812605953469 6.155166753850455 1.0214050121127596 1.1107578027005671 0.5099427404097527 0.04153323384605368 0.13664911820676753 22.167366291468714 0.014443120980699307 0.015677703664581787 1.004324229997352e-06 5.99812605953469 0.08935279058780754 KLGDVS(ph)PTQIDVSQFGSFKEDTK ddPTM_KYSE-520_SHP099_60min_R1 6 KLGDVSPTQIDVSQFGSFKEDTK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.593)PT(0.407)QIDVSQFGSFKEDTK;KLGDVS(1)PTQIDVSQFGSFKEDTK;KLGDVS(0.857)PT(0.143)QIDVSQFGSFKEDTK;KLGDVS(0.963)PT(0.037)QIDVSQFGSFKEDTK;KLGDVS(0.988)PT(0.012)QIDVSQFGSFKEDTK;KLGDVS(0.639)PT(0.361)QIDVSQFGSFKEDTK 312.64 7.834999999999998e-61 19441650000.0 7196230.0 9009660.0 9021630.0 5677550.0 6875510.0 5212180.0 4314010.0 4915490.0 11276850.0 5624710.0 True False 6797040.776571146 8576822.409824638 9603178.704918366 6217142.644982355 7416573.5206993995 5179648.851260003 4750112.231480277 4898439.312473989 9229258.306254834 5574879.445358164 1.2192265040333017 1.5384767498364462 1.7225805147973743 1.1152066526136204 1.3303558567306228 0.9291050868503993 0.8520564934252316 0.8786628232028584 1.655508140887142 1.0 22.410509176964393 -5.604887041937631 1.947624022368445 1.062972110689226 1.4867669927304101 0.28700383271174634 0.2604759963687547 0.40279714324358806 3.109608900931204 0.08715744425793237 0.12842184257358602 2.4837790411665495e-06 5.604887041937631 0.4237948820411841 KLGDVSPT(ph)QIDVSQFGSFKEDTK ddPTM_KYSE-520_SHP099_60min_R1 1 KLGDVSPTQIDVSQFGSFKEDTK 23 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KLGDVS(0.411)PT(0.589)QIDVSQFGSFKEDTK 65.811 0.021349 773070000.0 820280.0 881780.0 910120.0 600290.0 692560.0 573820.0 468710.0 472990.0 1158200.0 583300.0 True False 774777.4332123593 839417.9652212355 968787.7914434876 657341.3811162299 747060.5318726286 570238.5765322784 516091.78096877853 471349.3080866962 947900.075846034 578132.4158005335 1.340138369753119 1.451947585500638 1.6757195496502613 1.1370083447163513 1.292196236459397 0.9863459666807914 0.8926878460086899 0.815296453207911 1.6395899104420348 1.0 19.141040440760754 -5.616777124581983 1.8149058249244714 1.0602552694427447 1.4775728567242703 0.3296544825378367 0.2369963786835609 0.3873723977958807 2.6060293611341603 0.07980108284783094 0.11848485814338082 2.4167007419875342e-06 5.616777124581983 0.41731758728152557 KLGEMWNNTAADDKQPYEK ddPTM_KYSE-520_SHP099_60min_R1 1 KLGEMWNNTAADDKQPYEK 19 2 P09429;Q5T7C4 P09429 HMGB1 High mobility group protein B1 0 230.42 9.622600000000001e-20 1596000000.0 2088900.0 1816300.0 1288200.0 1046700.0 1842700.0 1579100.0 1201800.0 1243200.0 1463000.0 1236800.0 False True 1973024.5528810904 1729042.2216781187 1371239.433192876 1146178.05329817 1987710.0064711978 1569244.251162595 1323289.6724377086 1238887.6293650623 1197356.0792287556 1225842.9142158409 1.609524784946213 1.4104924877623242 1.1186094215587514 0.9350121781560963 1.621504667050032 1.2801348630924905 1.0794936749984834 1.0106414247681694 0.9767614311289566 1.0 20.225342685871837 -1.0000000000000002 0.23086298848182427 0.9918750214851971 4.006213459252096 0.40761976854041715 0.19055703937844842 59.81539986882887 0.7839896799532192 0.3038894304317213 68.24080231754371 0.09999999999999995 1.0000000000000002 3.0143384377668987 KLGGSLADSYLDEGFLLDK ddPTM_KYSE-520_SHP099_60min_R1 2 KLGGSLADSYLDEGFLLDK 19 1 P78371-2;P78371;F8VQ14;F5GWF6 P78371-2 CCT2 T-complex protein 1 subunit beta 0 ; 138.02 8.252999999999999e-06 235440000.0 427420.0 310270.0 258157.0 232423.0 364130.0 325000.0 234328.0 282700.0 304140.0 243437.0 False True 403710.16055935354 295364.1634752355 274798.21328580467 254512.41203947712 392784.95938370767 322971.554447371 258016.16106089472 281719.37968267576 248915.8427454777 241280.3375711203 1.6731995844475105 1.2241534741229105 1.1389167308538126 1.0548410807178041 1.6279194705118876 1.3385738668082359 1.0693625666237363 1.1676018962781647 1.0316457828732388 1.0 17.880350826606957 -6.761256072629697 24.99966540671903 1.0811193464183437 1.3281201761733952 0.34209858587893693 0.1862800645500409 6.838464481237928 932840.6175761325 0.0775909109881953 0.0562407323207225 1.7327819979322905e-07 6.761256072629697 0.24700082975505144 KLGPGRPLPTFPTSECT(ph)SDVEPDTR ddPTM_KYSE-520_SHP099_60min_R1 2 KLGPGRPLPTFPTSECTSDVEPDTR 25 2 Q8TDD1;H0YHZ9;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 KLGPGRPLPTFPT(0.002)S(0.007)ECT(0.549)S(0.441)DVEPDT(0.001)R;KLGPGRPLPT(0.001)FPT(0.073)S(0.073)ECT(0.467)S(0.386)DVEPDTR 103.4 0.004116399999999999 906600000.0 922900.0 872760.0 990620.0 732860.0 834680.0 861340.0 722140.0 821000.0 1220030.0 773570.0 True False 871704.8972444609 830831.2995605316 1054476.9502480405 802510.7940576071 900364.5673204437 855964.0575621504 795140.9586072274 818152.1426228397 998503.3064534932 766716.7716283529 1.1369320843120911 1.083622180060066 1.3753148349794704 1.0466848042899006 1.1743118197457056 1.1164018960277262 1.0370726036402036 1.06708523003253 1.3023105055245785 1.0 19.548334213013206 KLGPGRPLPTFPTSECTS(ph)DVEPDTR ddPTM_KYSE-520_SHP099_60min_R1 5 KLGPGRPLPTFPTSECTSDVEPDTR 25 2 Q8TDD1;H0YHZ9;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 KLGPGRPLPTFPT(0.01)S(0.008)ECT(0.229)S(0.749)DVEPDT(0.005)R;KLGPGRPLPTFPTSECT(0.045)S(0.955)DVEPDTR;KLGPGRPLPTFPTS(0.002)ECT(0.033)S(0.965)DVEPDTR;KLGPGRPLPTFPTSECT(0.127)S(0.873)DVEPDTR;KLGPGRPLPTFPTSECT(0.054)S(0.946)DVEPDTR 212.27 2.5246e-21 4634620000.0 2458860.0 2417820.0 2383580.0 1915350.0 2172410.0 2118360.0 1885790.0 2118120.0 2774440.0 2068350.0 True False 2322462.1341841132 2301664.2979781935 2537229.3806628427 2097384.288129025 2343366.307677918 2105138.529474256 2076424.0567368171 2110772.736092926 2270671.6339408285 2050026.0281519494 1.1328939741695663 1.1227488170250648 1.2376571545045678 1.0231012969234192 1.143091002503226 1.026883805651965 1.0128769236206552 1.0296321642295139 1.1076306362743042 1.0 20.96721079634629 -5.753272222204344 1.2503956185186256 1.0382201161156832 1.1539565733527848 0.42489928772109076 0.05551690504984571 0.43653097297723126 1.43574173184091 0.021883903727976203 0.031801695042721165 1.7649311889237922e-06 5.753272222204344 0.11573645723710158 KLGPIS(ph)PPQPPSVSAWNKPLTSFGSAPSSEGAK ddPTM_KYSE-520_SHP099_60min_R1 3 KLGPISPPQPPSVSAWNKPLTSFGSAPSSEGAK 33 2 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3;H7C5N8;A0A2R8YET2 E7EPN9 PRRC2C Protein PRRC2C 1 KLGPIS(0.989)PPQPPS(0.007)VS(0.003)AWNKPLT(0.001)S(0.001)FGSAPSSEGAK;KLGPIS(0.768)PPQPPS(0.116)VS(0.116)AWNKPLT(0.001)SFGSAPSSEGAK;KLGPIS(0.987)PPQPPS(0.013)VSAWNKPLTSFGSAPSSEGAK 182.37 1.2670999999999999e-11 4681510000.0 1730080.0 2106910.0 1700490.0 1308820.0 1401420.0 1851780.0 1232975.0 1587310.0 2137540.0 1452730.0 True False 1634109.0135710246 2005690.881063613 1810106.3062802008 1433209.8592889176 1511703.7810109432 1840222.3541370877 1357616.1456763875 1581803.9920909377 1749416.6189983846 1439859.942406836 1.1349083097898303 1.3929763735984957 1.2571405405267888 0.9953814375120387 1.049896407621435 1.2780564969819324 0.9428806967204243 1.0985818450139195 1.2149908247840417 1.0 20.4574970544486 -5.164008326600836 6.906681136489674 1.0881407288612708 1.277666183176048 0.3469994835426258 0.11182819213845252 0.2735078881980099 16.701787185403493 0.029715596076990147 0.051903247262849395 6.854750839137603e-06 5.164008326600836 0.1895254543147773 KLGSTLT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 KLGSTLTPK 9 1 O75410;O75410-9;O75410-2;O75410-7;O75410-3;E7EVI4;E5RFM9;E7ET87;R4GMT7;H0YAY0 O75410 TACC1 Transforming acidic coiled-coil-containing protein 1 1 KLGS(0.002)T(0.002)LT(0.995)PK 115.29 0.00077351 0.0 475310.0 462760.0 423680.0 382530.0 419500.0 432420.0 365640.0 463810.0 602840.0 490040.0 True False 448943.6067930058 440528.3149830793 450991.090711968 418885.5361881613 452512.26337150234 429721.1063819458 402602.4595025162 462201.1513640681 493379.45235971565 485698.6268453511 0.9243254602322599 0.9069993008717024 0.9285410042049921 0.8624392020806281 0.9316729312384582 0.8847484481745739 0.8289141398596271 0.9516212849233261 1.0158139741185848 1.0 18.88970188205395 -7.529210720110362 5.353833834969684 1.0026260344004059 0.8962130019882684 0.6889895404313888 0.030395867149152347 0.09725749554674464 9.136472958676832 0.02047219354322324 0.008043557300898748 2.95657758412072e-08 7.529210720110362 -0.10641303241213751 KLGVSVS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 2 KLGVSVSPSR 10 1 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 KLGVS(0.038)VS(0.888)PS(0.074)R;KLGVS(0.052)VS(0.594)PS(0.354)R 71.506 0.014297 315010000.0 976290.0 908540.0 906640.0 780150.0 847600.0 919170.0 775110.0 878630.0 1039100.0 951360.0 True False 922133.2475141356 864892.3746536571 965083.4650752912 854295.2214393502 914301.2978156982 913433.119081201 853465.6831446098 875582.2376037836 850425.6335793593 942931.6905468805 0.9779427892378055 0.9172375722699889 1.0234924488703558 0.9059990559272401 0.9696368326378157 0.9687161098079429 0.9051193121419195 0.9285744093466245 0.9018952720595597 1.0 19.84679373496727 -6.745526267840195 24.993176180931496 0.9279451102879905 0.9593381994784582 0.08999115447658479 0.039579475842435714 486.8947613039296 764717.862130068 0.014174323772511833 0.010942547580232725 1.7966924058562528e-07 6.745526267840195 0.03139308919046768 KLILDSAR ddPTM_KYSE-520_SHP099_60min_R1 2 KLILDSAR 8 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 168.8 0.00035254 2904200000.0 5174500.0 4664300.0 3410400.0 3274300.0 4928200.0 4415000.0 3718300.0 4001200.0 4041800.0 3532400.0 False True 4887460.169889982 4440220.02674297 3630239.840832933 3585488.4875458092 5316021.302377685 4387444.347338906 4094182.051110944 3987320.7710871054 3307911.0054865284 3501105.6841656123 1.3959761888921005 1.2682336459663794 1.0368838213743028 1.0241017584135874 1.5183835570632327 1.2531596424472191 1.16939687642896 1.1388747243822115 0.9448189526089309 1.0 21.739379180853625 -7.506922351936299 1.955914649997347 0.9706462310772109 1.2379963155010378 0.35715330259014344 0.14078789731702013 0.4317384860974389 2.9844436486837647 0.12907339029023637 0.04256346583824442 3.112272734572209e-08 7.506922351936299 0.2673500844238269 KLITSEEERS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 4 KLITSEEERSPAK 13 2 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KLITSEEERS(1)PAK;KLITSEEERS(1)PAK;KLITSEEERS(1)PAK;KLITSEEERS(1)PAK 197.67 8.7511e-09 5643200000.0 4991710.0 4707450.0 4297390.0 4262360.0 4676580.0 4778010.0 4078000.0 3978330.0 5342400.0 4481290.0 True False 4714809.895572812 4481297.035973494 4574406.635467111 4667453.41287474 5044600.239899642 4748188.667277177 4490244.037444645 3964530.1017792015 4372354.83094444 4441589.256990865 1.0615141614348762 1.0089399934764636 1.0299031204353706 1.0508521033385458 1.1357646887225477 1.0690292128664842 1.0109543628729738 0.8925926897763468 0.9844122402949681 1.0 22.082644552866146 -7.0063331054995865 5.269264580714299 0.9528059731225847 1.057854591290848 0.5525499287354527 0.04040650371927415 0.13119096441515113 11.483049989459284 0.019413592472653517 0.011957616066703385 9.85523295596918e-08 7.0063331054995865 0.10504861816826316 KLITSEEERS(ph)PAKR ddPTM_KYSE-520_SHP099_60min_R1 6 KLITSEEERSPAKR 14 3 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KLITSEEERS(1)PAKR;KLITSEEERS(1)PAKR;KLITSEEERS(1)PAKR;KLITSEEERS(1)PAKR;KLITSEEERS(1)PAKR;KLITSEEERS(1)PAKR 154.39 1.8065e-06 12813650000.0 5838360.0 5626670.0 5776750.0 4573410.0 4999160.0 4624110.0 4341320.0 4261390.0 6631530.0 4179390.0 True False 5514494.5323178815 5356356.327396151 6149128.548126799 5008065.511354143 5392565.45067051 4595249.214263486 4780182.992800194 4246608.2327059 5427411.319267182 4142363.8561162176 1.3312433972152657 1.29306756080528 1.4844491603622856 1.2089873524653594 1.3018087348141483 1.1093301732725822 1.1539746769811718 1.025165432156754 1.3102208081633355 1.0 21.982022851602853 -6.000746540057149 1.3991194976882013 1.1186775375188849 1.352708820399776 0.5090210337449463 0.10045574749797406 0.3355720655164855 1.3526295202330516 0.03988243269415321 0.04478273532109217 9.982825045792756e-07 6.000746540057149 0.23403128288089103 KLKACPY(ph)Y(ph)T(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 1 KLKACPYYTAR 11 2 Q9BX63;Q9BX63-2 Q9BX63 BRIP1 Fanconi anemia group J protein 3 KLKACPY(1)Y(1)T(1)AR 40.552 0.048597 496410000.0 569110.0 494910.0 519670.0 517970.0 551130.0 500740.0 535880.0 622360.0 651970.0 649910.0 True False 537540.3338073422 471133.7807249449 553168.7597013987 567197.7130666409 594500.7954992518 497614.69591992855 590051.9800848049 620201.1784199156 533588.682826229 644152.3030223295 0.8344926056853801 0.7314012206653759 0.8587546099050788 0.8805335483632961 0.922919614988388 0.7725109319413219 0.916013149865818 0.9628176061933856 0.828357952494555 1.0 19.297042313144615 -1.000000000504248 0.051367910348610275 1.2391918466094427 0.17209371236274615 0.40877938665526226 0.06072563729037256 454.2096251142087 1.762816254948575 8.454006812064678 38.08142600628628 0.09999999988389262 1.000000000504248 -1.0670981342466965 KLLDFCK ddPTM_KYSE-520_SHP099_60min_R1 2 KLLDFCK 7 1 H0Y804;Q04828;B4DK69;P52895 H0Y804 AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C2 0 ; 96.711 0.01457 2545100000.0 7171500.0 6403000.0 4289700.0 3647500.0 6937100.0 6456800.0 4648800.0 5336200.0 5821500.0 5778200.0 False True 6773682.598969185 6095390.268901058 4566220.925762676 3994157.3033391405 7483010.303300248 6416500.716171648 5118746.071915808 5317689.96767844 4764462.348072598 5727009.64337158 1.1827608159886758 1.0643233813925632 0.7973132943904858 0.6974245814239135 1.306617374385087 1.1203928604517164 0.8937903706588352 0.9285282021190787 0.8319284661214023 1.0 22.449350602057766 -6.801657675054169 24.99651388660436 0.9076056296222987 1.0169172015573829 0.0955982991172949 0.1701701109783818 461.64208546667555 286916.23753740446 0.07751865390738222 0.05226384736730766 1.578855284107924e-07 6.801657675054169 0.10931157193508412 KLLEGEEER ddPTM_KYSE-520_SHP099_60min_R1 6 KLLEGEEER 9 1 Q03252;P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5;P20700;E9PBF6 Q03252;P02545-3;P20700 LMNB2;LMNA;LMNB1 Lamin-B2;Prelamin-A/C;Lamin-A/C;Lamin-B1 0 ;;;;; 173.64 0.00015633 6278630000.0 9909100.0 9442100.0 6595380.0 5338840.0 9037200.0 9187500.0 6614170.0 7728000.0 8109470.0 7764380.0 False True 9359422.469698874 8988487.343118966 7020528.747781118 5846241.748419224 9748376.225365777 9130157.404569922 7282794.851678582 7701193.371728762 6636994.671102689 7695593.633796234 1.216205391692684 1.168004415363724 0.9122790367918496 0.7596869100188279 1.2667477896122883 1.1864136594314971 0.9463590722482031 1.0007276550970592 0.8624408963014152 1.0 22.87560118886021 -4.64357791779723 6.156183685460347 0.9991319905508328 1.2033139914962483 0.25004375087565955 0.13908753526230233 0.3035213725479713 14.797241733705023 0.03815713901960714 0.10359445672864868 2.2720719609121118e-05 4.64357791779723 0.2041820009454155 KLLLDPS(ph)SPPTK ddPTM_KYSE-520_SHP099_60min_R1 2 KLLLDPSSPPTK 12 1 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 KLLLDPS(0.563)S(0.41)PPT(0.027)K;KLLLDPS(0.719)S(0.084)PPT(0.197)K 77.726 0.010162000000000001 1086170000.0 2080750.0 2268090.0 1848560.0 2097140.0 2761700.0 3030800.0 2682900.0 3059900.0 3986200.0 2715900.0 True False 1965326.6496277081 2159127.551927503 1967721.1354005772 2296451.5550718675 2979030.0780764725 3011883.6529818224 2954113.7145807333 3049285.921086027 3262406.5639245883 2691839.238938227 0.7301055060044799 0.8021012253239732 0.7309950412108296 0.8531161600785949 1.1066894467485084 1.118894326754013 1.0974331868889609 1.132789015397811 1.2119618871487352 1.0 21.360160821727067 -5.680932758002574 3.1281716524859835 1.1207685606456537 0.7614002968242071 0.9073718190775716 0.05261415749720474 0.06553645565136064 1.2876656722720625 0.015870526218915378 0.020721558877890785 2.0848136506845497e-06 5.680932758002574 -0.3593682638214466 KLLLDPSS(ph)PPTK ddPTM_KYSE-520_SHP099_60min_R1 2 KLLLDPSSPPTK 12 1 F5GX19;F5H3Y3;Q6IAA8;H0YFI1;F5H479 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 KLLLDPS(0.026)S(0.974)PPTK;KLLLDPS(0.021)S(0.978)PPTK 144.33 1.8714e-05 3116800000.0 2894600.0 3124100.0 2663900.0 3103900.0 3947600.0 4311600.0 4215200.0 4852300.0 6077600.0 3838700.0 True False 2734030.767757959 2974013.546630301 2835619.2563907015 3398893.7227784405 4258253.66122847 4284689.705093189 4641313.552387613 4835468.503835334 4974061.0438282285 3804692.104463408 0.7185944861479274 0.7816699656567188 0.7452953296967564 0.8933426488811245 1.1192111067891601 1.1261593809566564 1.219892024099069 1.2709224218597581 1.3073491644679989 1.0 21.8593482773666 -5.711465375353783 1.4412299640826918 1.2123718038766464 0.7370548742725528 0.8534053143868344 0.08086967037161281 0.13590137409644829 0.5873511888134245 0.029432915846763642 0.0427445497011018 1.9432766157015018e-06 5.711465375353783 -0.47531692960409366 KLLYEK ddPTM_KYSE-520_SHP099_60min_R1 2 KLLYEK 6 1 H7C4X7;P05408-2;P05408 REV__J3KTF2 SCG5 Neuroendocrine protein 7B2;N-terminal peptide;C-terminal peptide 0 ; 92.925 0.035449 2349600000.0 2493700.0 2143900.0 1480610.0 1372260.0 2245300.0 2063000.0 1645850.0 1804210.0 1858190.0 1635950.0 False True 2355369.489932294 2040903.8259404919 1576052.48965976 1502679.177814986 2421992.3359905463 2050124.051769005 1812228.5799480795 1797951.6166157809 1520789.537157953 1621456.755749839 1.4526255366231207 1.2586853264530515 0.9719978556757242 0.9267463794432653 1.493713802358239 1.2643717104998768 1.117654586544936 1.108849563973923 0.937915569912728 1.0 20.628859116955578 -7.404271480016996 1.858495543142094 0.9737584660178848 1.2119714090500746 0.24651764152393763 0.1705978900531721 0.6111034086388586 3.808765092672618 0.1508170834511062 0.05338693089440407 3.9421080156453006e-08 7.404271480016996 0.23821294303218976 KLNGLYPFR ddPTM_KYSE-520_SHP099_60min_R1 4 KLNGLYPFR 9 1 P05120;H7C004;H7BYS2 P05120 SERPINB2;SERPINB10 Plasminogen activator inhibitor 2 0 ;;; 159.58 0.000362 2086770000.0 2482850.0 2446360.0 2044440.0 1602430.0 2820320.0 2386800.0 1731410.0 1669130.0 1970880.0 1598040.0 False True 2345121.3610612317 2328833.193538775 2176227.8736196593 1754724.4654118535 3042263.1385742947 2371903.0958614917 1906437.81973321 1663340.1776078686 1613017.8738416778 1583882.6088563083 1.480615639030597 1.4703319428580517 1.3739830600141967 1.1078627011877522 1.9207630171348717 1.4975245530186092 1.2036484327015957 1.050166324389997 1.0183948386215362 1.0 20.595033981827033 -6.9544345129759755 3.104122723253893 1.0321374644873855 1.4731418628076471 0.5474028853250592 0.1864230808940215 0.21333693493279174 4.191471309818932 0.09483040185644996 0.05733409154979044 1.1106199924805466e-07 6.9544345129759755 0.4410043983202616 KLNHQEVVEEDKR ddPTM_KYSE-520_SHP099_60min_R1 3 KLNHQEVVEEDKR 13 2 O95926 O95926 SYF2 Pre-mRNA-splicing factor SYF2 0 ;; 244.46 7.812000000000001e-16 1485321000.0 1505075.0 1275413.0 942946.0 916593.0 1351852.0 1373458.0 1000457.0 1234975.0 1227200.0 908359.0 False True 1421585.4894573726 1214140.2450460568 1003729.807926943 1003705.7231362647 1458235.0614142853 1364885.7391636248 1101592.9570793905 1230691.1599703324 1004371.4151944832 900311.6459526074 1.578992669758495 1.3485777402794692 1.114869292693543 1.1148425410783813 1.619700320405549 1.5160147547791165 1.2235684854590658 1.3669612800222695 1.1155819428857567 1.0 19.7800649561506 -7.890826960846955 2.982910491946732 1.0001541144214605 1.3544995618917604 0.3514270839028997 0.16737899428262462 0.29009795487550105 5.074581526639174 0.17133526100473953 0.04636384559329094 1.285798868220319e-08 7.890826960846955 0.35434544747029983 KLNLTLS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 2 KLNLTLSPAK 10 1 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 KLNLTLS(1)PAK;KLNLT(0.001)LS(0.999)PAK 134.61 0.00030928 2774600000.0 3488400.0 3798300.0 3711400.0 3316240.0 3587840.0 3573230.0 3164170.0 3705760.0 4190000.0 3871640.0 True False 3294891.4980470035 3615823.966635469 3950642.7824499616 3631414.4525360907 3870182.5959828612 3550928.1461476306 3484035.1829233 3692905.5834908853 3429201.621304504 3837340.281690344 0.8586393846197052 0.9422734762116802 1.029526310528215 0.9463363126442508 1.0085586140090892 0.9253618093476585 0.9079296927476513 0.9623607270669685 0.8936402220222035 1.0 21.871675273003447 -4.837914670456296 0.002888637129213224 1.8879089092650867 2.773804151794709e-08 0.03981352822077866 0.05026679807247842 435963.8572091815 239.79653696186284 77023.07869082622 79711.84197616925 1.4523969543818527e-05 4.837914670456296 -1.8879088815270453 KLNS(ph)GGGLSEELGSAR ddPTM_KYSE-520_SHP099_60min_R1 1 KLNSGGGLSEELGSAR 16 1 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7-2;Q96KQ7 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 KLNS(0.999)GGGLS(0.001)EELGSAR 91.166 0.001283 614530000.0 199980.0 213630.0 218400.0 182580.0 222300.0 209610.0 183200.0 205650.0 332350.0 215020.0 True False 188886.71074975334 203366.89413483243 232478.41345235534 199932.3483053212 239793.7452860193 208301.74623911854 201719.64385970065 204936.6481490707 272003.6178617072 213115.09008302848 0.8863131685145529 0.95425853727956 1.0908585279521175 0.9381426168716098 1.1251842616709917 0.9774143452627654 0.946529144328127 0.961624294503165 1.276322656249898 1.0 17.70127322437199 -4.545250011361155 5.1645548410587585 1.0320028583951302 0.9000328501959518 0.20020988267057982 0.09858198985391667 0.2587689489741188 19.148582258229062 0.024545385474487987 0.07534633830445249 2.8493774872018526e-05 4.545250011361155 -0.13197000819917837 KLNSSSSSSSNSSNEREDFDSTSS(ph)SSSTPPLQPR ddPTM_KYSE-520_SHP099_60min_R1 1 KLNSSSSSSSNSSNEREDFDSTSSSSSTPPLQPR 34 2 A0A669KAU9;A0A669KAX4;K4DI93;Q13620-1;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 KLNSSSSSSSNSSNEREDFDS(0.001)T(0.001)S(0.069)S(0.482)S(0.051)S(0.038)S(0.353)T(0.006)PPLQPR 211.54 1.6556999999999998e-22 629930000.0 390000.0 383030.0 283240.0 349780.0 287890.0 261120.0 232160.0 328880.0 441900.0 314110.0 True False 368365.922554275 364628.66386024875 301498.10360002355 383022.9860348083 310545.30512996885 259490.25322245416 255628.99846325367 327739.1920411687 361662.09939247265 311327.2297738819 1.1832113844388765 1.1712071061856038 0.9684283119693793 1.2302906697656972 0.9974884155026177 0.8334968110914129 0.8210942507307116 1.052716115706316 1.1616783397171817 1.0 18.248072239942022 -5.924404949761012 7.841328544009878 0.9618753009580686 1.127790085422667 0.3253001571799712 0.11261204120327385 0.3151705406554334 28.396047668318023 0.037424678103770904 0.04248546485785168 1.1901317744020468e-06 5.924404949761012 0.1659147844645984 KLNVTEQEK ddPTM_KYSE-520_SHP099_60min_R1 8 KLNVTEQEK 9 1 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;A0A2R8Y6I8 P06733 ENO1 Alpha-enolase;Enolase 0 ;;;;;;; 215.06 1.6780000000000002e-08 18283320000.0 23942310.0 24272160.0 16210010.0 15501030.0 25436150.0 27181110.0 20114250.0 27357280.0 23125740.0 23680290.0 False True 22614182.336488307 23106089.000345085 17254933.181533016 16974243.23064538 27437830.29310383 27011462.610169217 22147594.686162572 27262383.980917163 18926688.568464562 23470501.05358683 0.9635151071064306 0.9844736142441214 0.7351753225096176 0.7232160571216834 1.1690347057550652 1.1508685966480996 0.9436353589382751 1.1615595218300994 0.8064032602138305 1.0 24.484345305382757 -5.762875938798552 24.99993641025309 1.0475283831886972 0.8527706670707214 0.32938003548612893 0.1303316097449318 45.88109608536126 798457.6490363562 0.04060882951686851 0.04857626570189239 1.726330967807744e-06 5.762875938798552 -0.19475771611797588 KLNVTEQEKIDK ddPTM_KYSE-520_SHP099_60min_R1 3 KLNVTEQEKIDK 12 2 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879 P06733 ENO1 Alpha-enolase;Enolase 0 ;; 141.46 2.2303000000000003e-05 2645350000.0 3269840.0 3051440.0 2775360.0 1979030.0 2512130.0 2538960.0 1851870.0 2137090.0 3088150.0 2166650.0 False True 3088455.4569355636 2904844.242095181 2954264.14633301 2167116.416182934 2709820.3389355247 2523113.4088606094 2039075.0921095207 2129676.9335905537 2527419.805926377 2147455.166628192 1.438193218154526 1.3526914495058802 1.3757046909489719 1.0091556042055176 1.2618751632381342 1.1749318207291162 0.949530925626334 0.9917212553193588 1.1769371697267064 1.0 21.03419658121953 -4.761685733210003 0.5134118840596518 1.0304920728769607 1.6136034062737878 0.6456207750491041 0.10158470799115718 1.7731056784200683 0.5157931270809423 0.06893324341038491 0.5872090732230324 1.731068552357739e-05 4.761685733210003 0.5831113333968272 KLPCT(ph)ET(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 1 KLPCTETER 9 1 B0QZ77 B0QZ77 MMS19 2 KLPCT(1)ET(1)ER 63.408 0.022341 3974400000.0 2112200.0 1964700.0 1772200.0 1436500.0 1922000.0 1856200.0 1820600.0 1892400.0 2159500.0 1908000.0 True False 1995032.055433692 1870312.862925176 1886438.8476202541 1573024.528100525 2073250.465315921 1844614.7672775716 2004644.0153437287 1885835.7060894792 1767389.2365649366 1891096.604401537 1.0549604133338533 0.9890096881206456 0.9975370074852644 0.8318054849441866 1.0963218169237996 0.9754206966393051 1.0600431573288798 0.9972180700341733 0.9345843213145902 1.0 20.85079163283986 -4.259991777804003 5.785116712497343 0.9874987131560058 1.05708144988006 0.08542478047777458 0.06681547425875056 0.38651194690885415 56.81086755543106 0.01641713101285552 0.1059279135336608 5.495512780320592e-05 4.259991777804003 0.06958273672405424 KLPDFLTAK ddPTM_KYSE-520_SHP099_60min_R1 1 KLPDFLTAK 9 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5;Q9BZZ5-3 H0YER7 API5 Apoptosis inhibitor 5 0 151.15 0.028457999999999997 0.0 821280.0 741050.0 473170.0 432040.0 736100.0 666500.0 442640.0 566010.0 574880.0 493760.0 False True 775721.9612189091 705448.8456612733 503671.2952987678 473100.95170243754 794026.8821639168 662340.1262743787 487386.37095009815 564046.6434177266 470496.2835454735 489385.6705394667 1.5850933280572028 1.4414987771988352 1.0291909338979082 0.9667241608871017 1.622497204073494 1.3534113607050617 0.9959146748470084 1.1525606027572457 0.9614018388131985 1.0 18.90061233363036 KLPEEEAECYFHSR ddPTM_KYSE-520_SHP099_60min_R1 2 KLPEEEAECYFHSR 14 1 J3QQZ9;Q9NVS9-3;Q9NVS9;J3QQV6 J3QQZ9 PNPO Pyridoxine-5-phosphate oxidase 0 ; 142.19 1.0689e-05 755180000.0 712770.0 572230.0 339740.0 393730.0 704070.0 563270.0 532480.0 561550.0 445150.0 500500.0 False True 673231.2272282311 544739.2118652589 361640.18400322006 431149.9808207589 759476.3033896884 559754.4229956028 586308.2749040038 559602.1141167552 364321.98131830525 496065.95938310813 1.3571405465221602 1.098118509366535 0.7290163276934872 0.8691384132806116 1.530998628356094 1.1283870872568955 1.1819159605974943 1.1280800537345046 0.7344224581976245 1.0 18.920172435670345 -7.742349343240469 24.614034429690125 0.8672112824156065 1.1201987799304456 0.1837820759179566 0.21923603905205966 322.60704507972014 415962.0165032242 0.15761205773737194 0.059349228478831575 1.8098836500199173e-08 7.742349343240469 0.25298749751483907 KLPEEEAECYFHSRPK ddPTM_KYSE-520_SHP099_60min_R1 2 KLPEEEAECYFHSRPK 16 2 J3QQZ9;Q9NVS9-3;Q9NVS9;J3QQV6 J3QQZ9 PNPO Pyridoxine-5-phosphate oxidase 0 ; 224.67 4.5357999999999994e-18 2069220000.0 2358880.0 1888000.0 1471990.0 1439430.0 2274820.0 1925470.0 1564380.0 1663600.0 1698420.0 1409060.0 False True 2228028.2240893 1797297.6460542234 1566876.8306672734 1576232.9944195906 2453835.3920447268 1913452.4275131705 1722522.7972775036 1657829.3598871608 1390029.7416840105 1396576.8246320912 1.5953495610069592 1.2869307397591225 1.1219410225284565 1.1286403773990932 1.7570357382173771 1.370101804472692 1.2333892177619934 1.1870663544226383 0.9953120495538758 1.0 20.413463506685122 -7.417140424555943 1.617327859445282 0.9935198195686012 1.361632005327077 0.3883084533941734 0.18371698847359344 0.4707659450805569 2.1809888549574965 0.16775993042677412 0.05827518582566534 3.827009809695689e-08 7.417140424555943 0.3681121857584757 KLPEEHAR ddPTM_KYSE-520_SHP099_60min_R1 2 KLPEEHAR 8 1 P41743;E9PBE1;Q05513-2;Q05513-3;Q05513 P41743;Q05513-2 PRKCI;PRKCZ Protein kinase C iota type;Protein kinase C zeta type 0 ; 147.2 0.00096283 719490000.0 1664230.0 1434470.0 1037360.0 893920.0 1464680.0 1352180.0 981180.0 1199870.0 1195550.0 1036090.0 False True 1571911.844339744 1365555.9080166323 1104229.885434686 978877.888033152 1579941.9831107794 1343740.5430542966 1080367.2497940022 1195707.9310217646 978468.2573629109 1026911.0486658234 1.5307186015594951 1.3297703922757291 1.0752926330565011 0.9532255878490383 1.5385383039392373 1.3085267168953945 1.052055337409827 1.1643734212181711 0.9528266918874326 1.0 19.969879789727592 -1.0000000000000002 0.16063055322969097 0.9708301794234286 2.625311325263866 0.318169733607196 0.175631491488694 94.96403633771803 0.9850072810904753 0.5692074319405879 37.221274385018795 0.09999999999999995 1.0000000000000002 1.6544811458404374 KLPEELGR ddPTM_KYSE-520_SHP099_60min_R1 2 KLPEELGR 8 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ; 134.05 0.0018399999999999998 729910000.0 431060.0 348270.0 272220.0 215997.0 386050.0 381060.0 249660.0 299830.0 352630.0 300370.0 False True 407148.2425031942 331538.5864360727 289767.73676740006 236525.28993813394 416429.9386759681 378681.66319296963 274898.06924679526 298789.95971084834 288601.2810789037 297708.95548432396 1.3676049544456275 1.1136332324861153 0.9733255632031463 0.7944849678886745 1.398782035288473 1.271986133493755 0.9233785688427844 1.0036310772874324 0.9694074557125648 1.0 18.183543094865616 -4.295499607356632 3.473475571229189 1.0496378697753157 1.3956229485213048 0.25953118793025287 0.1642175340197954 0.40232498861415983 8.480298489747097 0.04459543762821259 0.3468791955507489 5.0640780736429204e-05 4.295499607356632 0.34598507874598905 KLPFPLS(ph)PS ddPTM_KYSE-520_SHP099_60min_R1 2 KLPFPLSPS 9 1 Q96M11 Q96M11 HYLS1 Hydrolethalus syndrome protein 1 1 KLPFPLS(0.826)PS(0.174);KLPFPLS(0.875)PS(0.125) 70.1 0.024619 1585260000.0 851820.0 880950.0 757890.0 711750.0 772450.0 898780.0 831500.0 1005710.0 1110420.0 970590.0 True False 804567.8465389294 838627.8396670909 806744.802066875 779394.5060045598 833237.4203607077 893170.380634487 915556.1346579752 1002221.4267444777 908795.7194102512 961991.3277075933 0.8363566524619291 0.87176236990153 0.8386196203965084 0.8101887029084158 0.8661589729153757 0.9284599090543724 0.9517301334095472 1.0418196067658447 0.9447026113799735 1.0 19.87566436268406 -6.498208747597041 1.6379073075941937 0.9933988256493762 0.8409340920567787 0.852856845194941 0.02782496937662812 0.1320277066887111 0.7136555722627714 0.01317518845810352 0.009998361788316238 3.175347444124674e-07 6.498208747597041 -0.1524647335925975 KLPFQR ddPTM_KYSE-520_SHP099_60min_R1 2 KLPFQR 6 1 Q71DI3;P68431;K7EK07;Q16695;P84243;Q6NXT2;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;K7EP01;P0DPK2;P0DPK5;Q5TEC6;A0A590UJL8 Q71DI3;Q5TEC6 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A;H3F3C;HIST2H3PS2 Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3;Histone H3.3C 0 ; 110.54 0.02196 11654100000.0 5885000.0 6578500.0 5780000.0 7094300.0 7054400.0 6040900.0 6403800.0 5052300.0 8509500.0 4213000.0 False True 5558547.318543348 6262458.9854701925 6152588.048326987 7768540.1390209235 7609541.145954544 6003196.502341928 7051158.599065231 5034774.750515678 6964389.3070383575 4175676.097664404 1.3311730097198944 1.499747307740894 1.4734351765857356 1.8604269002967277 1.8223494753845528 1.4376585640106803 1.6886268077663353 1.2057388151661947 1.667847108863107 1.0 21.993578377396606 -9.090519170452833 0.5915689182787601 0.9593491159199712 1.5829211608343734 0.4075203031017717 0.19882765394350607 5.270174748128728 2.0208343409147798 0.7294020602948986 0.0858927984186306 8.118594113722018e-10 9.090519170452833 0.6235720449144022 KLPFTAGANGEQKDS(ph)DTEK ddPTM_KYSE-520_SHP099_60min_R1 2 KLPFTAGANGEQKDSDTEK 19 2 Q6UB99;A0A087WTN8;A0A2R8Y4T9;A0A2R8YE03;A0A2R8YEI0;X5D778 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 KLPFTAGANGEQKDS(0.999)DT(0.001)EK;KLPFTAGANGEQKDS(1)DTEK 167.99 6.780699999999999e-09 496320000.0 687170.0 568130.0 519210.0 624970.0 591490.0 568940.0 547000.0 635620.0 718520.0 658780.0 True False 649051.3102605661 540836.1820194842 552679.1073653724 684366.9608959171 638036.8978822648 565389.0344224223 602296.0982055467 633415.1825748236 588054.8804152063 652943.7217230842 0.9940386723495154 0.8283044373139019 0.846442180203343 1.0481254940164042 0.9771698182479172 0.8659077583752399 0.9224318699567536 0.9700915431168772 0.9006210808848277 1.0 19.31659912334486 -5.060641194772039 0.009070981475896548 1.8385491944691228 1.273263037508644e-06 0.0595085336067005 0.06778592485780635 18152.146985292125 34.06925271178779 3283.9687363003864 3625.215472515917 8.696786432854274e-06 5.060641194772039 -1.8385479212060853 KLPFTIS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 KLPFTISPSR 10 1 Q6UB98-2;Q6UB98;J3KSU9;F5GYX2 Q6UB98-2 ANKRD12 Ankyrin repeat domain-containing protein 12 1 KLPFT(0.001)IS(0.999)PS(0.001)R 162.72 4.5156000000000006e-05 496490000.0 529830.0 465300.0 493260.0 483640.0 474150.0 461170.0 431640.0 509890.0 569720.0 554200.0 True False 500439.2737100798 442946.289570461 525056.3288439049 529605.0001883315 511462.9074555375 458291.6669676743 475274.3836004433 508121.31059922103 466273.2094724584 549290.2191610755 0.9110653280416949 0.8063975547333934 0.9558814457789131 0.9641624440303905 0.931134197577173 0.8343342935681938 0.8652518596204467 0.925050716131936 0.8488649409861911 1.0 19.067209077428405 -10.811451080398943 2.5161966478861357 1.0354098786485126 0.8943717893035126 0.28557893629988473 0.050485968745308335 39352865.13832072 25672303.901097093 8471377.81786239 0.014020452120424734 1.5436502926844875e-11 10.811451080398943 -0.14103808934500006 KLPPPPGS(ph)PLGHSPTASPPPTAR ddPTM_KYSE-520_SHP099_60min_R1 1 KLPPPPGSPLGHSPTASPPPTAR 23 1 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785;O95785-2 M0QXA7 WIZ Protein Wiz 1 KLPPPPGS(0.999)PLGHS(0.001)PTASPPPTAR 59.971000000000004 0.0079802 0.0 69051.0 69356.0 68394.0 60189.0 51115.0 65930.0 61280.0 77972.0 84925.0 67280.0 True False 65220.60338024411 66024.03365452153 72802.7866742691 65909.34446351725 55137.45969543354 65518.50641450828 67474.7804351662 77701.53333080161 69504.76078503233 66683.95154304797 0.9780554671859961 0.9901037974916584 1.0917587363920853 0.9883839055483887 0.8268475160749801 0.9825228544264157 1.0118593585685713 1.1652208894765514 1.042301171072074 1.0 16.02505197731477 -7.023652805472228 12.596240858388564 1.0799800291435537 0.977678365565197 0.248564051236412 0.07151182295960382 2.164362656267281 1148.868009186536 0.03477654425742552 0.02063941728900079 9.469939283367477e-08 7.023652805472228 -0.10230166357835668 KLPPPPPQAPPEEENES(ph)EPEEPSGVEGAAFQSR ddPTM_KYSE-520_SHP099_60min_R1 1 KLPPPPPQAPPEEENESEPEEPSGVEGAAFQSR 33 1 R4GMQ1;O60341 R4GMQ1 KDM1A Lysine-specific histone demethylase 1A 1 KLPPPPPQAPPEEENES(1)EPEEPSGVEGAAFQSR 89.654 0.0013493000000000001 132690000.0 36324.0 39802.0 16842.0 25769.0 38093.0 37303.0 30780.0 26850.0 56169.0 38827.0 True False 34309.03530990122 37889.85217597998 17927.662268152788 28218.078012267655 41090.70238047833 37070.17814015474 33891.54278385146 26756.86361683712 45970.12550526319 38483.022986948905 0.8915369076264293 0.9845861690447215 0.465858991229269 0.7332604307576748 1.0677618126417405 0.9632865420350861 0.8806881620330451 0.6952900666330557 1.1945559869569875 1.0 15.231934512258732 -5.742588856129653 24.955098050240984 0.9472006374184815 0.7625837066992379 0.23325819822858962 0.17362848988064375 405.92096314509115 537372.3445987789 0.052879955346562486 0.0681501555058116 1.8088857765322347e-06 5.742588856129653 -0.18461693071924357 KLPS(ph)DSGDLEALEGK ddPTM_KYSE-520_SHP099_60min_R1 9 KLPSDSGDLEALEGK 15 1 G3V5V3;O60524-4;O60524-5;O60524-3;O60524;O60524-2 G3V5V3 NEMF Nuclear export mediator factor NEMF 1 KLPS(0.943)DS(0.057)GDLEALEGK;KLPS(0.977)DS(0.023)GDLEALEGK;KLPS(0.974)DS(0.026)GDLEALEGK;KLPS(0.82)DS(0.18)GDLEALEGK;KLPS(0.899)DS(0.101)GDLEALEGK;KLPS(0.891)DS(0.109)GDLEALEGK;KLPS(0.991)DS(0.009)GDLEALEGK;KLPS(0.904)DS(0.096)GDLEALEGK;KLPS(0.956)DS(0.044)GDLEALEGK 248.52 3.1034e-19 6410650000.0 7486820.0 6628390.0 6029700.0 6339620.0 6450590.0 6912420.0 7308480.0 9058530.0 9190060.0 9207340.0 True False 7071511.169994345 6309952.194983764 6418384.109861104 6942135.578723753 6958214.734163482 6869277.022747999 8047292.482291183 9027108.073706793 7521376.766559828 9125770.130802117 0.7748947287337369 0.6914432540532495 0.7033252008175396 0.7607177782499731 0.7624797287713276 0.7527339527830313 0.8818206427454534 0.9891886322270697 0.8241909075895966 1.0 23.121514883492516 -6.8186340378453885 3.1217586351719078 0.9317197247821163 0.7366612533302529 0.7631693734575493 0.050582752068822456 0.11761553184969456 2.323031326976832 0.02208339239822858 0.014597815312163165 1.518329262368151e-07 6.8186340378453885 -0.1950584714518634 KLPS(ph)TTL ddPTM_KYSE-520_SHP099_60min_R1 2 KLPSTTL 7 1 E9PGT3;Q15418-3;Q15418-4;Q15418;Q15418-2 E9PGT3 RPS6KA1 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-1 1 KLPS(0.794)T(0.205)T(0.001)L;KLPS(0.794)T(0.205)T(0.001)L 66.351 0.034989 9842000000.0 4640900.0 4623900.0 3974900.0 4046300.0 4664600.0 10004100.0 9239900.0 13120000.0 14074900.0 13548800.0 True False 4383460.025595212 4401760.903384596 4231128.414064868 4430859.135435545 5031677.482056523 9941660.70106752 10173959.264733879 13074489.782231014 11519252.959355306 13428768.17280691 0.3264230917673942 0.3277859031253595 0.31507941455366334 0.32995276099917936 0.37469389725899116 0.7403255885524378 0.7576241643173215 0.9736179531870016 0.8578041419079415 1.0 23.67882363595458 -6.440949434468544 1.391504402804325 0.9284314113123429 0.3117805155744707 0.9597231202116232 0.05548668375352482 0.07121357865944522 0.2789840772305851 0.026597226922656755 0.020702510452312948 3.6228517734568317e-07 6.440949434468544 -0.6166508957378722 down KLPTS(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 1 KLPTSLK 7 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KLPT(0.015)S(0.985)LK 72.643 0.028207999999999997 0.0 1316000.0 1498000.0 1447000.0 1253400.0 1275800.0 1151200.0 1272900.0 1356300.0 1598200.0 1424300.0 True False 1242998.856619041 1426033.831456158 1540275.9352818595 1372522.7591515488 1376198.2016909732 1144014.9337840427 1401577.1543068388 1351595.3118627998 1308007.1673434041 1411681.8100886338 0.8805092250505078 1.0101666120969732 1.0910928541220999 0.9722607101279953 0.9748643014707169 0.8103914958798079 0.992842115192261 0.9574362311702087 0.9265594824525505 1.0 20.42898351435123 -6.013340729069969 24.66190975318113 0.9331790120957647 0.9944045645015024 0.10958495971457705 0.0684056294578187 1071.0124509307157 1979894.6337621415 0.022440574982769163 0.02344739206256929 9.69748844811095e-07 6.013340729069969 0.06122555240573768 KLPVDSVFNKFEDEDS(ph)DDVPR ddPTM_KYSE-520_SHP099_60min_R1 7 KLPVDSVFNKFEDEDSDDVPR 21 2 P49756 P49756 RBM25 RNA-binding protein 25 1 KLPVDSVFNKFEDEDS(1)DDVPR;KLPVDS(0.001)VFNKFEDEDS(0.999)DDVPR;KLPVDSVFNKFEDEDS(1)DDVPR;KLPVDSVFNKFEDEDS(1)DDVPR;KLPVDSVFNKFEDEDS(1)DDVPR;KLPVDSVFNKFEDEDS(1)DDVPR;KLPVDS(0.003)VFNKFEDEDS(0.997)DDVPR 172.18 1.7219999999999998e-09 4242530000.0 3372640.0 3172570.0 3567410.0 3031970.0 3247570.0 3228550.0 3059390.0 3207730.0 4164080.0 3204300.0 True False 3185552.936008843 3020154.975075346 3797370.95665781 3320127.5172049794 3503135.2828543335 3208399.4218801856 3368662.99796905 3196603.1333198133 3407988.0399144795 3175912.3949076785 1.0030355185856583 0.9509566384507088 1.1956787481753561 1.045409036637326 1.10303271855714 1.0102291949313833 1.0606914105598226 1.006514895828144 1.0730736922652262 1.0 21.598739686724635 -8.943312428292641 12.062556854618204 0.999999506894045 1.0505405354444883 0.05260649305576193 0.06339920036533238 0.0 0.0 0.06109142095296301 0.014816845965184615 1.1394297951381088e-09 8.943312428292641 0.05054102855044329 KLQIQCVVEDDKVGTDLLEEEITK ddPTM_KYSE-520_SHP099_60min_R1 2 KLQIQCVVEDDKVGTDLLEEEITK 24 2 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;E9PQZ1;H0YE72;H0YE58 P29692-2 EEF1D Elongation factor 1-delta 0 ; 192.57 2.3769999999999998e-15 128832000.0 356330.0 316660.0 223076.0 411270.0 284220.0 232502.0 265467.0 334140.0 284430.0 196672.0 False True 336563.6645737554 301447.1782836498 237455.8358942198 450356.9771471655 306586.49700941227 231050.86877576195 292302.9950682483 332980.94632886245 232784.6818968116 194929.63908850084 1.7265905079778592 1.5464409604061722 1.218161778806821 2.3103565945797344 1.5728059542049304 1.1853039376472736 1.4995307867755225 1.7082109620984027 1.1941984963668046 1.0 17.572593943765227 -6.0090926004381755 24.9867983289959 1.373754647714267 1.6907758720971109 0.24688533198800966 0.3105618922877036 771.3034884493064 2119575.337344979 0.09970257298363944 0.10734221901082959 9.792811604370935e-07 6.0090926004381755 0.31702122438284386 KLQLERPVS(ph)PETQADLQR ddPTM_KYSE-520_SHP099_60min_R1 4 KLQLERPVSPETQADLQR 18 2 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KLQLERPVS(0.997)PET(0.003)QADLQR;KLQLERPVS(0.989)PET(0.011)QADLQR;KLQLERPVS(0.984)PET(0.016)QADLQR;KLQLERPVS(0.983)PET(0.017)QADLQR 181.88 1.2896e-09 3609880000.0 2582160.0 2992270.0 2991010.0 2012900.0 2312460.0 2145640.0 1798590.0 1883610.0 3860470.0 2099710.0 True False 2438922.4373916574 2848516.857711162 3183815.2903852086 2204205.41079955 2494437.445902419 2132248.2648752555 1980409.0297468267 1877076.1965478812 3159505.962529211 2081108.2029496618 1.1719344693057512 1.368750002365957 1.529865331304073 1.059149835494097 1.1986101647030771 1.0245734757342797 0.9516127162152794 0.9019599239902109 1.518184377943963 1.0 20.98892054631509 -5.282695430547404 24.382928394874416 1.0849594651052519 1.3580399485046248 0.30705560958601863 0.18101799854160155 667.1102734438402 765244.2019026668 0.05071888473456303 0.07531890147264418 5.215603516311133e-06 5.282695430547404 0.27308048339937296 KLQQFS(ph)PLS(ph)DYEGQEEEMNGTK ddPTM_KYSE-520_SHP099_60min_R1 4 KLQQFSPLSDYEGQEEEMNGTK 22 1 Q9UK61;Q9UK61-2;Q9UK61-3;A0A087X0F1;Q9UK61-4 Q9UK61 FAM208A Protein FAM208A 2 KLQQFS(1)PLS(0.999)DY(0.001)EGQEEEMNGTK;KLQQFS(1)PLS(1)DYEGQEEEMNGTK;KLQQFS(1)PLS(0.974)DY(0.027)EGQEEEMNGTK;KLQQFS(1)PLS(0.999)DY(0.001)EGQEEEMNGTK 150.82 3.2927e-07 1031910000.0 1772560.0 1643100.0 1503640.0 1551300.0 1535660.0 1579770.0 1353190.0 1594740.0 2119970.0 1559330.0 True False 1674232.563289244 1564163.0096566177 1600567.0403090648 1698735.085584649 1656507.7052898258 1569910.0694440724 1489983.6510617249 1589208.2191551127 1735036.8880947288 1545515.5493403843 1.083284192128507 1.0120655274702295 1.0356201469420194 1.0991381395739808 1.0718156190643389 1.0157840664327833 0.9640690135389708 1.028270611598425 1.1226266140351877 1.0 20.559656738462667 -6.26670501002591 24.524759694703715 1.024036908254549 1.0584774827259742 0.13138640767172705 0.043706956839356506 778.0332521752697 3623680.229574949 0.0159994368792702 0.014511946858684923 5.411217494218368e-07 6.26670501002591 0.03444057447142512 KLQQFSPLS(ph)DYEGQEEEMNGTK ddPTM_KYSE-520_SHP099_60min_R1 1 KLQQFSPLSDYEGQEEEMNGTK 22 1 Q9UK61;Q9UK61-2;Q9UK61-3;A0A087X0F1;Q9UK61-4 Q9UK61 FAM208A Protein FAM208A 1 KLQQFS(0.011)PLS(0.989)DY(0.001)EGQEEEMNGTK 78.97800000000001 0.0015965 0.0 102760.0 105720.0 77990.0 108140.0 96749.0 104880.0 67483.0 85107.0 119900.0 104820.0 True False 97059.69795301871 100641.05251104469 83017.36018841196 118417.59308652335 104362.59587349123 104225.40501673936 74304.84021061237 84811.78368112317 98129.18243303346 103891.37634872597 0.9342421032831851 0.9687142094761445 0.7990784519954047 1.1398211983354432 1.004535694311947 1.0032151722284646 0.7152166312745512 0.8163505640395072 0.9445363598192126 1.0 16.66471638069754 -6.708469774230038 24.999990037595683 0.8537195598615382 0.9754987737324422 0.1886877961016059 0.10569332603627077 144.59195205943212 68242.31532589336 0.04072478842210344 0.031545252780672335 1.956726946318383e-07 6.708469774230038 0.12177921387090396 KLQVYEGGGQPPPQDLPGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 KLQVYEGGGQPPPQDLPGSPK 21 1 Q86Y91;A0A494BYR6;Q86Y91-6 Q86Y91 KIF18B Kinesin-like protein KIF18B 1 KLQVYEGGGQPPPQDLPGS(1)PK 63.931999999999995 0.013677000000000002 599150000.0 438900.0 418420.0 291040.0 341540.0 305770.0 349350.0 299700.0 331490.0 493380.0 415910.0 True False 414553.3420745416 398318.4751387762 309800.90408046433 373999.8589122551 329832.35940668505 347169.57706519705 329996.6007901328 330340.138560348 403794.6290976652 412225.3609730834 1.005647350507409 0.9662638761441578 0.7515328589904322 0.9072703776143354 0.8001263159260639 0.8421839361015582 0.8005247421244425 0.801358115814514 0.9795482455142571 1.0 18.653073739684157 -4.596893316465527 8.033537582445181 0.8501098048246224 0.9959377321967402 0.2958316274498103 0.07727459895713869 0.2271354352622222 21.22108644264832 0.018378310442346748 0.04908504847030892 2.5299193895471164e-05 4.596893316465527 0.1458279273721178 KLREEEEK ddPTM_KYSE-520_SHP099_60min_R1 2 KLREEEEK 8 2 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;E9PGZ1;C9J813;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 0 ; 75.509 0.010922 2527790000.0 3802800.0 3461800.0 3026380.0 2822200.0 3742500.0 3422100.0 3405950.0 3426000.0 3743400.0 3315160.0 False True 3591851.103306142 3295489.931732261 3221465.297179211 3090421.0394746284 4037013.458087837 3400741.404536462 3750256.664868706 3414116.0056344084 3063692.9234346757 3285790.261555455 1.0931467979961087 1.002952005272611 0.9804232896028509 0.9405411768466496 1.2286278601899445 1.0349843215271417 1.1413560715507682 1.0390547581750411 0.9324067209281821 1.0 21.64780896249377 -3.3932568096266187 4.7098401391611295 1.0398568333530107 39.60340310786384 0.03681627409304167 0.08594578663323783 13448.525234385335 312.8271140877435 0.021707979210217134 5599911.649977368 0.0004043367261658004 3.3932568096266187 38.56354627451083 KLRPVS(ph)PEEIR ddPTM_KYSE-520_SHP099_60min_R1 2 KLRPVSPEEIR 11 2 Q08AE8-5;Q08AE8-2;Q08AE8;J3KNG6;Q08AE8-4;Q08AE8-3;K7EMJ7 Q08AE8-5 SPIRE1 Protein spire homolog 1 1 KLRPVS(1)PEEIR;KLRPVS(1)PEEIR 119.96 0.00017408 414240000.0 1302220.0 1121290.0 1072880.0 1113460.0 1100210.0 1037810.0 964920.0 1065340.0 1160400.0 1034800.0 True False 1229983.260688788 1067421.5453093962 1142039.561468696 1219282.9036260443 1186790.267661408 1031332.6428339273 1062463.530311695 1061644.584192224 949700.6113035202 1025632.4770622165 1.1992436747049062 1.0407446811423902 1.1134978532855273 1.1888107396116325 1.1571301554927413 1.0055577079501599 1.0359105762280227 1.0351120971063235 0.9259658138203728 1.0 19.968082420631728 -6.267535665536065 24.369600943213 1.0049163181431078 1.1356297010343472 0.6596479788143611 0.04996039444818087 243.70205859596527 974183.2247482565 0.017855147829202972 0.016145406833811545 5.400877593532007e-07 6.267535665536065 0.13071338289123946 KLRPVS(ph)PEEIRR ddPTM_KYSE-520_SHP099_60min_R1 2 KLRPVSPEEIRR 12 3 Q08AE8-5;Q08AE8-2;Q08AE8;J3KNG6;Q08AE8-4;Q08AE8-3;K7EMJ7 Q08AE8-5 SPIRE1 Protein spire homolog 1 1 KLRPVS(1)PEEIRR;KLRPVS(1)PEEIRR 61.443999999999996 0.046273 1231810000.0 1003280.0 940340.0 912020.0 797760.0 824240.0 862350.0 737000.0 760780.0 959740.0 777510.0 True False 947626.0584109034 895164.6549208849 970810.2684835945 873578.8705447098 889102.9987159183 856967.7537775099 811503.1524268517 758141.0317473874 785475.4090765597 770621.8662936258 1.2296900722121928 1.1616133593850102 1.2597751386848035 1.13360249527601 1.1537474312689024 1.1120470249555368 1.0530497354426862 0.9838042039914257 1.0192747486576956 1.0 19.555663597296213 -6.4905561362647095 0.8441405581383856 0.9899532739924126 1.2092717895411427 0.8757112515538876 0.03180598310691727 0.19201344173512785 0.28516293389422137 0.021960832543563166 0.01646891708180537 3.2317954392811094e-07 6.4905561362647095 0.21931851554873005 KLS(ph)ASSPR ddPTM_KYSE-520_SHP099_60min_R1 3 KLSASSPR 8 1 A0A0A0MRY2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326-5;Q15326-2;Q15326;Q15326-4;Q15326-6;Q15326-3 A0A0A0MRY2 ZMYND11 Zinc finger MYND domain-containing protein 11 1 KLS(0.976)AS(0.018)S(0.007)PR;KLS(0.992)AS(0.008)SPR;KLS(0.991)AS(0.009)SPR 133.07 0.00049955 849110000.0 1240810.0 1189940.0 1160170.0 1168230.0 1202450.0 1091730.0 1144620.0 1112900.0 1484080.0 1128260.0 True False 1171979.7958065886 1132773.496263647 1234956.4145376335 1279258.227958843 1297075.9739953827 1084916.1081133187 1260329.3600146878 1109039.6096528128 1214608.4826123135 1118264.4941729964 1.048034523060948 1.0129745710127196 1.1043509124833082 1.1439674912551958 1.1599008828002044 0.9701784450517315 1.1270404869169652 0.9917507132093953 1.0861549203621703 1.0 20.09283002700582 -7.759744582470255 0.7116911607370863 1.0070432613260494 1.082782546929859 0.11714094809031794 0.061369968465452965 1.4819609452215048 1.6966028457405726 0.060754219323182986 0.025350135401158994 1.7388231658086175e-08 7.759744582470255 0.07573928560380971 KLS(ph)ASYEK ddPTM_KYSE-520_SHP099_60min_R1 3 KLSASYEK 8 1 Q5T1W7;B7Z3H4;Q9Y297-2;Q9Y297 Q5T1W7 BTRC F-box/WD repeat-containing protein 1A 1 KLS(0.631)AS(0.367)Y(0.001)EK;KLS(0.887)AS(0.113)YEK;KLS(0.996)AS(0.004)YEK 137.55 0.0006456000000000001 3247800000.0 4160670.0 4077910.0 3840580.0 3945050.0 4365220.0 4874920.0 5187080.0 5294150.0 6142980.0 4925590.0 True False 3929869.3410099824 3882001.082532298 4088149.9319452704 4319986.365877464 4708737.979295709 4844493.816020242 5711440.667422355 5275785.829313894 5027569.683923899 4881953.104651035 0.8049789206836087 0.7951737756009817 0.83740049203883 0.8848889518749812 0.964519297575738 0.9923269872061848 1.1699089575401835 1.0806711404678702 1.0298275252038238 1.0 22.2190270061859 -5.856253800867679 1.214507767692561 1.0740464974038169 0.8037341645512889 0.8460055964374092 0.046077957540245906 0.16487504027694994 0.5135731489774422 0.02008283431698992 0.026469107543158142 1.392342882614221e-06 5.856253800867679 -0.270312332852528 KLS(ph)DASDER ddPTM_KYSE-520_SHP099_60min_R1 3 KLSDASDER 9 1 E7ER68;Q658Y4 E7ER68 FAM91A1 Protein FAM91A1 1 KLS(0.816)DAS(0.184)DER;KLS(0.989)DAS(0.011)DER;KLS(0.999)DAS(0.001)DER 131.66 0.00035873 4861700000.0 8067800.0 7188600.0 6636300.0 6972000.0 7770600.0 7699700.0 7509100.0 7830500.0 9048500.0 7796700.0 True False 7620263.051239435 6843248.865691416 7064086.516455425 7634616.783791766 8382102.011333959 7651643.316241296 8268193.109753697 7803337.823152431 7405520.494122627 7727627.30374082 0.9861064401424469 0.8855562770708041 0.914133955843835 0.9879638967702248 1.0846928406182734 0.9901672292784175 1.0699523650359275 1.0097973823575783 0.958317502001906 1.0 22.88159408533912 -5.414878657837979 4.364273442921511 1.0215944604739686 0.9251551399088628 0.47861487414288595 0.041805667081181073 0.1818498410969888 5.739522006758544 0.011888925611154181 0.017876442293891376 3.846992522534819e-06 5.414878657837979 -0.09643932056510585 KLS(ph)DASDERGEPDLASGSDVNGSTESFEMVIEEATIDSATK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSDASDERGEPDLASGSDVNGSTESFEMVIEEATIDSATK 41 2 E7ER68;Q658Y4 E7ER68 FAM91A1 Protein FAM91A1 1 KLS(0.449)DAS(0.449)DERGEPDLAS(0.02)GS(0.02)DVNGS(0.02)T(0.02)ES(0.02)FEMVIEEATIDSATK 101.78 0.00017203 115310000.0 35834.0 37913.0 32779.0 35658.0 37600.0 38952.0 31218.0 36985.0 72719.0 45411.0 True False 33846.21658669202 36091.60257142681 34891.986788254384 39046.92559903136 40558.90608526463 38708.886119489245 34373.820098319506 36856.70766736388 59515.06269681202 45008.69386922338 0.7519928635351006 0.8018806916791243 0.7752277124423127 0.8675418511918064 0.9011349274678356 0.8600313137715401 0.763715121309576 0.8188797429770835 1.3223014840141358 1.0 15.457916078560064 -7.743736575829142 24.99970379160031 1.1611506621217507 0.8196914068087728 0.7226045059551345 0.08514724076347835 100.12770286876915 141400.41427628364 0.055038335827012105 0.020702512228350286 1.8041117048562086e-08 7.743736575829142 -0.3414592553129778 KLS(ph)DDPCPVESK ddPTM_KYSE-520_SHP099_60min_R1 6 KLSDDPCPVESK 12 1 O60244 O60244 MED14 Mediator of RNA polymerase II transcription subunit 14 1 KLS(0.998)DDPCPVES(0.002)K;KLS(1)DDPCPVESK;KLS(0.999)DDPCPVES(0.001)K;KLS(1)DDPCPVESK;KLS(1)DDPCPVESK;KLS(0.999)DDPCPVES(0.001)K 210.34 1.5629999999999999e-09 2799840000.0 4527810.0 4343660.0 3673240.0 4049370.0 4386920.0 4216080.0 4242420.0 3998130.0 4434370.0 3959480.0 True False 4276643.3533345405 4134984.0536334203 3910022.927791805 4434220.907312514 4732145.645839598 4189765.8808445274 4671285.21562921 3984261.420200558 3629200.189370898 3924402.0876288265 1.0897566706571962 1.0536596305124866 0.996335961627798 1.1299099348894004 1.205825891479642 1.067618910420068 1.1903176869553802 1.0152531089412142 0.924777866368863 1.0 21.90404143455859 -7.497615102457245 9.266220526144025 0.9647395352945656 1.102174731682757 0.48228431666858185 0.06084976926797432 0.3052519520479189 109.5909320104227 0.036660950080165594 0.016770033664188562 3.179690852995943e-08 7.497615102457245 0.13743519638819146 KLS(ph)EADNRK ddPTM_KYSE-520_SHP099_60min_R1 6 KLSEADNRK 9 2 C9J365;C9JA28;Q9UNL2;Q9UNL2-2 C9J365 SSR3 Translocon-associated protein subunit gamma 1 KLS(1)EADNRK;KLS(1)EADNRK;KLS(1)EADNRK;KLS(1)EADNRK;KLS(1)EADNRK;KLS(1)EADNRK 81.23899999999999 0.0072295 5490640000.0 2935780.0 3808730.0 3240460.0 4672440.0 3972780.0 4267400.0 4296180.0 4689990.0 5906250.0 3363530.0 True False 2772926.431067665 3625752.8937797192 3449345.2365193204 5116507.292779683 4285415.183973874 4240765.573688346 4730479.801076246 4673721.519341898 4833823.884446234 3333731.740986742 0.8317785132426145 1.0875958761776503 1.0346799036380647 1.5347687487491906 1.285470912757199 1.2720776304673913 1.4189743412516103 1.4019488916521328 1.4499738611288153 1.0 21.66870658741008 -5.135493944063845 5.90575415285426 1.3521725541325704 0.9841884132775824 0.5442701393697535 0.1480987429908764 0.1643877698867111 7.198137420450964 0.03828238843158372 0.06746647226449153 7.319915302442237e-06 5.135493944063845 -0.367984140854988 KLS(ph)EMQDLEETMAK ddPTM_KYSE-520_SHP099_60min_R1 3 KLSEMQDLEETMAK 14 1 Q66GS9 Q66GS9 CEP135 Centrosomal protein of 135 kDa 1 KLS(1)EMQDLEETMAK;KLS(1)EMQDLEETMAK;KLS(1)EMQDLEETMAK 218.14 4.345e-14 773200000.0 1527730.0 1397070.0 1325630.0 1337430.0 1298900.0 1478300.0 1398370.0 1390550.0 1610560.0 1486300.0 True False 1442983.7714457489 1329952.6601551778 1411082.2308829918 1464538.9450870084 1401116.0402699506 1469073.3813524581 1539730.8863760363 1385726.5066068093 1318122.902913646 1473132.5383239016 0.9795342468557138 0.9028058409926708 0.9578786661575548 0.9941664493768695 0.9511133613708039 0.997244540551618 1.0452086599946457 0.9406665527756647 0.8947754995713949 1.0 20.490455805387437 -3.90211846122607 20.991127700430958 0.9652999148774182 2.5938902791851652 0.009898717150629954 0.04380134423043954 7650.152025884316 1683456.436150337 0.011058477524057897 15588.734601255472 0.00012527994059296076 3.90211846122607 1.628590364307747 KLS(ph)FDFQ ddPTM_KYSE-520_SHP099_60min_R1 2 KLSFDFQ 7 1 P23381-2;P23381 P23381-2 WARS Tryptophan--tRNA ligase, cytoplasmic;T1-TrpRS;T2-TrpRS 1 KLS(1)FDFQ;KLS(1)FDFQ 61.353 0.041934 19106800000.0 8836100.0 8130800.0 8022100.0 7131800.0 7262900.0 7394400.0 7348300.0 6672100.0 8547000.0 6975000.0 True False 8345943.918671349 7740184.163420384 8539217.401813831 7809604.127746144 7834448.909751807 7348248.806786581 8091137.876496933 6648956.042379846 6995080.252336421 6913206.926467895 1.2072463630038441 1.1196228097536507 1.2352035014488856 1.1296644539665528 1.133258268280217 1.0629290986001136 1.1703884987905127 0.9617759330946195 1.0118430312790243 1.0 22.720923678438265 -6.8849124176808445 0.708212868922625 0.9796251915749087 1.1777307474845975 0.6470754431608392 0.05153653532657165 0.4322453318065027 0.42142787587106334 0.04397618608530809 0.026218431296859513 1.3034296090493467e-07 6.8849124176808445 0.1981055559096888 KLS(ph)FLSWGTNK ddPTM_KYSE-520_SHP099_60min_R1 3 KLSFLSWGTNK 11 1 Q8IUC4-2;A8MT19;Q8IUC4 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 KLS(1)FLSWGTNK;KLS(1)FLSWGTNK;KLS(0.989)FLS(0.011)WGTNK 201.06 3.2961e-07 785578000.0 1372290.0 1356810.0 1543260.0 1472830.0 1530180.0 1298570.0 1346300.0 1414590.0 1743430.0 1161500.0 True False 1296166.3381077072 1291626.8109866679 1642741.008903304 1612807.320377513 1650596.4604667586 1290465.1429499153 1482397.1426218073 1409683.1174577868 1426867.0602937744 1151210.0136333248 1.125916490264784 1.1219732244251202 1.4269690060449198 1.4009670705411472 1.4337926537464039 1.1209641400504227 1.287686108586934 1.224522980831879 1.2394498339972309 1.0 20.134719615643156 -8.784421720767881 0.6697417780710915 0.9914680324357044 1.2833224735200806 0.3248807855633591 0.11608948430772696 3.890710852733084 2.33434085179892 0.2112991345842426 0.04842440222709419 1.642775734434492e-09 8.784421720767881 0.2918544410843762 KLS(ph)FTESLTSGASLLTLNK ddPTM_KYSE-520_SHP099_60min_R1 5 KLSFTESLTSGASLLTLNK 19 1 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 KLS(0.989)FT(0.011)ESLTSGASLLTLNK;KLS(0.997)FT(0.003)ESLTSGASLLTLNK;KLS(0.348)FT(0.348)ES(0.277)LT(0.024)S(0.002)GASLLTLNK;KLS(0.498)FT(0.498)ES(0.003)LTSGASLLTLNK;KLS(0.486)FT(0.486)ES(0.022)LT(0.005)S(0.001)GASLLTLNK 194.67 1.4109e-12 383701000.0 487585.0 614693.0 531220.0 418828.0 455491.0 558307.0 398579.0 538789.0 651779.0 380189.0 True False 460537.6880734 585162.2256069961 565463.2911820521 458633.28719476983 491335.5503107253 554822.3989195337 438871.2550761769 536920.0667132984 533432.3636115111 376820.8212425664 1.2221662448342883 1.5528924959014316 1.5006158346490444 1.2171123816418288 1.3038970317259717 1.4723772351273139 1.1646682729181452 1.4248683630135004 1.4156127621942922 1.0 18.5235191577354 -10.525492027129653 2.671069431116676 0.9802084699016478 1.366443048035167 0.4303970591170815 0.1255226985832785 10986342.528063802 10928280.294212513 1573837.4495803255 0.03360409297184439 2.982002291654573e-11 10.525492027129653 0.38623457813351925 KLS(ph)GDQITLPTTVDYSSVPK ddPTM_KYSE-520_SHP099_60min_R1 7 KLSGDQITLPTTVDYSSVPK 20 1 E9PJ38;E9PND3;E9PN10;O00559;O00559-2 E9PJ38 EBAG9 Receptor-binding cancer antigen expressed on SiSo cells 1 KLS(0.999)GDQIT(0.001)LPTTVDYSSVPK;KLS(1)GDQITLPTTVDYSSVPK;KLS(0.993)GDQIT(0.007)LPTTVDYSSVPK;KLS(0.998)GDQIT(0.002)LPTTVDYSSVPK;KLS(1)GDQITLPTTVDYSSVPK;KLS(1)GDQITLPTTVDYSSVPK;KLS(0.999)GDQIT(0.001)LPTTVDYSSVPK 271.54 9.8645e-36 40039620000.0 6177500.0 6240790.0 5347930.0 5679690.0 5176300.0 5712390.0 5921560.0 6195460.0 7777180.0 5202130.0 True False 5834821.760459053 5940973.080783237 5692666.124790536 6219486.029938929 5583645.36088179 5676736.855106515 6520169.0736563755 6173969.395291241 6365040.158753455 5156043.1753959 1.131647187964254 1.1522349364979991 1.1040765042378513 1.2062517357530416 1.082932235231536 1.10098706740768 1.2645683621832224 1.1974239131186446 1.234481547619066 1.0 22.297832913836142 -6.728513702510389 24.999656370703022 1.1905706736454682 1.130903839996732 0.06345135018989856 0.07335997975249266 377.41136730907584 286558.68387351464 0.02639530525100967 0.020444058419785284 1.8684707238395085e-07 6.728513702510389 -0.05966683364873626 KLS(ph)GDQPAAR ddPTM_KYSE-520_SHP099_60min_R1 14 KLSGDQPAAR 10 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR;KLS(1)GDQPAAR 139.77 0.00016132 360960000000.0 187048600.0 167982600.0 164339800.0 161192000.0 172644100.0 167421300.0 172851400.0 188539500.0 219104400.0 168784600.0 True False 176672641.28586045 159912463.7489769 174933406.46097702 176511639.2158581 186230208.4594421 166376361.56492186 190324906.37909728 187885500.47995028 179320564.13244656 167289299.75643173 1.0560905063449402 0.9559037187782166 1.0456939368846356 1.0551280893210375 1.1132224758582157 0.9945427580076007 1.137699223179275 1.1231172630497348 1.0719189116908971 1.0 27.317769929029723 -5.1445673669324785 2.66645881556685 1.0781777865091904 1.005850594889709 0.1885360416999391 0.05075190721234084 0.38386767577500325 5.284458073081422 0.014216959744020773 0.02851807728646637 7.168571694374588e-06 5.1445673669324785 -0.07232719161948142 KLS(ph)HDAESEREDPAPAKK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSHDAESEREDPAPAKK 18 3 Q92766-5;Q92766-3;Q92766;Q92766-2;C9JU34;Q92766-6 Q92766-5 RREB1 Ras-responsive element-binding protein 1 1 KLS(0.999)HDAES(0.001)EREDPAPAKK 81.949 0.0028688000000000003 482820000.0 777890.0 753740.0 860680.0 917860.0 769090.0 790340.0 880900.0 912280.0 1187200.0 710010.0 True False 734738.8910147303 717529.1990131937 916160.8099366898 1005093.1384353293 829613.0074764924 785407.1948982626 969949.9687555156 909115.5136077526 971634.4068765425 703719.8637794208 1.0440786580454298 1.019623341537651 1.301882833058494 1.4282574503970136 1.178896674908316 1.1160793311704023 1.378318303459946 1.2918713260774355 1.380711923716706 1.0 19.424641710731763 -4.758903855158025 24.929110647248322 1.272195604470613 1.0318509028388125 0.34333534157500323 0.1249512165233329 63.028492376528305 619655.3499727745 0.03165209026956625 0.07613857364851724 1.7421925202093003e-05 4.758903855158025 -0.24034470163180055 KLS(ph)LDTDAR ddPTM_KYSE-520_SHP099_60min_R1 1 KLSLDTDAR 9 1 Q9NWH9;Q9NWH9-3;H7C3F4;H0YMM0 Q9NWH9 SLTM SAFB-like transcription modulator 1 KLS(0.861)LDT(0.139)DAR 56.358999999999995 0.048247000000000005 0.0 216290.0 194330.0 207160.0 204480.0 199620.0 182880.0 177170.0 191430.0 255070.0 201430.0 True False 204291.9625365746 184994.0951047233 220513.86506771963 223913.717720846 215328.9583175668 181738.5780841085 195080.07261257173 190765.974010098 208755.7177914418 199645.4869101687 1.0232736321682874 0.9266129576370646 1.1045271720414134 1.1215566211201002 1.0785566037586163 0.9103064682142428 0.9771323941840409 0.9555235981664536 1.0456320401841706 1.0 17.607080933906342 -6.242921671871025 24.903003894830896 0.9749024623860245 1.0509043182327547 0.2759591717691402 0.05918557610208496 1137.2958783576303 1529459.98799689 0.021154628561105848 0.021120091872655268 5.715817162437209e-07 6.242921671871025 0.07600185584673014 KLS(ph)LGQYDNDAGGQLPFSK ddPTM_KYSE-520_SHP099_60min_R1 2 KLSLGQYDNDAGGQLPFSK 19 1 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 KLS(0.989)LGQY(0.011)DNDAGGQLPFSK;KLS(0.999)LGQY(0.001)DNDAGGQLPFSK 79.48899999999999 0.004059 7500490000.0 852580.0 781780.0 630670.0 512430.0 505840.0 640920.0 626340.0 576980.0 933580.0 786930.0 True False 805285.6878239072 744222.1153242972 671323.9973076782 561131.1931323024 545646.7301641025 636919.780542797 689656.5596893284 574978.5910481438 764065.4056366247 779958.4124222758 1.0324725972542228 0.9541817915816894 0.8607176826553901 0.7194373240870969 0.6995843899798659 0.8166073605959948 0.884222220961113 0.7371913449365372 0.9796232638400643 1.0 19.573037675601856 -4.684861295578074 2.6074290550596606 0.8173615132915072 1.0207471368428407 0.2960107163147242 0.09743847350805725 0.31466763942491804 4.11243075267176 0.02585544237307082 0.09363250888265334 2.066039899658927e-05 4.684861295578074 0.2033856235513335 KLS(ph)LPTDLKPDLDVK ddPTM_KYSE-520_SHP099_60min_R1 3 KLSLPTDLKPDLDVK 15 2 H0Y332;Q5JRH0;Q5T5C0-2;Q5T5C0 H0Y332 STXBP5 Syntaxin-binding protein 5 1 KLS(0.65)LPT(0.35)DLKPDLDVK;KLS(0.999)LPT(0.001)DLKPDLDVK;KLS(0.969)LPT(0.031)DLKPDLDVK 175.93 1.3419999999999999e-08 20812412000.0 12411350.0 11475150.0 10520640.0 10093210.0 10650660.0 10995300.0 9919810.0 10954510.0 13750830.0 11583910.0 True False 11722867.67408718 10923866.569448682 11198817.288019171 11052465.643765772 11488806.34803415 10926674.254200555 10922601.202816028 10916511.361611849 11254025.90221543 11481285.569545615 1.0210413810438064 0.9514497747904206 0.9753975040673408 0.9626505304495432 1.0006550467230328 0.9516943192479961 0.9513395635579772 0.9508091489831205 0.9802060783216648 1.0 23.45278085509003 -4.250310007209992 24.472645842528745 0.967661000573345 1.0210414228885085 0.40843153518681763 0.0185603571354145 1169.7979880307407 2572234.969577278 0.0045110017545233316 0.06455798242720824 5.619400590738013e-05 4.250310007209992 0.05338042231516349 KLS(ph)LQER ddPTM_KYSE-520_SHP099_60min_R1 5 KLSLQER 7 1 Q96RR4-6;Q96RR4-5;Q96RR4-2;Q96RR4-3;Q96RR4-4;Q96RR4-7;Q96RR4;F5H4I7;J3KPJ3;Q8N5S9;Q8N5S9-2 Q96RR4-6 CAMKK2;CAMKK1 Calcium/calmodulin-dependent protein kinase kinase 2;Calcium/calmodulin-dependent protein kinase kinase 1 1 KLS(1)LQER;KLS(1)LQER;KLS(1)LQER;KLS(1)LQER;KLS(1)LQER 108.47 0.0021324 7292390000.0 11646100.0 9404000.0 8501380.0 7140060.0 7968640.0 8388850.0 8189610.0 7675440.0 9498900.0 8826800.0 True False 11000067.61707523 8952217.724308217 9049392.557488937 7818649.1556626875 8595726.632640507 8336492.075464099 9017495.701691285 7648815.69010116 7774139.20778266 8748601.419146478 1.2573515571301919 1.0232741549656292 1.0343816255800808 0.8937027509964538 0.9825258027904435 0.9528942600150385 1.0307356878730727 0.87429010920095 0.8886150866090219 1.0 23.060620970619624 KLS(ph)LSEGK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSLSEGK 8 1 K7EPU6;K7EMM8;Q49A26-4;Q49A26-2;Q49A26-3;Q49A26 K7EPU6 GLYR1 Putative oxidoreductase GLYR1 1 KLS(0.88)LS(0.12)EGK 91.75200000000001 0.0043568 548310000.0 986570.0 901610.0 873410.0 703510.0 907540.0 927880.0 833200.0 1005300.0 1195600.0 893680.0 True False 931842.9954214641 858295.3022557988 929711.4061054101 770371.3788820052 978958.234803752 922088.7567403889 917427.9872483766 1001812.8489387839 978509.1786233096 885762.690472518 1.0520233076472933 0.9689901273646259 1.049616806065118 0.8697266064243955 1.105215025800554 1.0410110593487432 1.035749187808945 1.1310172123013646 1.104708054593398 1.0 19.75656070466537 KLS(ph)MGSDDAAYTQALLVHQK ddPTM_KYSE-520_SHP099_60min_R1 4 KLSMGSDDAAYTQALLVHQK 20 1 A0A1B0GV57;Q9NYJ8 A0A1B0GV57 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 1 KLS(0.896)MGS(0.103)DDAAY(0.001)TQALLVHQK;KLS(0.839)MGS(0.161)DDAAYTQALLVHQK;KLS(0.996)MGS(0.004)DDAAYTQALLVHQK;KLS(0.966)MGS(0.034)DDAAYTQALLVHQK 231.29 3.5531e-20 4721650000.0 3111680.0 3289460.0 3005740.0 2832570.0 2509610.0 2893210.0 2730730.0 2737430.0 3236860.0 2767510.0 True False 2939068.907419707 3131429.404019877 3199494.809754038 3101776.6011567763 2707102.0292723617 2875152.403208239 3006778.8377565537 2727934.494250965 2649127.8186004087 2742992.0144901993 1.0714828522626778 1.1416108349851943 1.1664251273253097 1.130800448842451 0.9869157529339334 1.0481811058945436 1.0961675505699133 0.9945105490064531 0.9657803612281985 1.0 21.387318991484058 -5.750264020839097 24.91850158329406 1.0206762599682353 1.1313567327218608 0.6435543788996378 0.04079346679131922 144.0909508821927 321288.46282916586 0.01286404779441917 0.016453524169107624 1.7771986683810606e-06 5.750264020839097 0.11068047275362547 KLS(ph)NPDIFSSTGK ddPTM_KYSE-520_SHP099_60min_R1 2 KLSNPDIFSSTGK 13 1 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 KLS(1)NPDIFSSTGK;KLS(1)NPDIFSSTGK 215.93 3.0057e-11 3334300000.0 2742000.0 2390710.0 2254350.0 2323030.0 2261800.0 2160440.0 2225390.0 2393500.0 2664890.0 2232880.0 True False 2589895.7939585163 2275856.7030711332 2399669.0080875354 2543810.072755561 2439790.792118391 2146955.892585474 2450354.1389134238 2385197.507147097 2181013.1524100606 2213098.4203543556 1.170257847612502 1.02835765555638 1.0843028877600964 1.14943377545236 1.1024321239756423 0.9701131557636326 1.1072052270142958 1.0777638650002674 0.9855021052614743 1.0 21.077636181059493 -6.066403955434807 24.986576834587378 1.0377369859046146 1.1038490483111065 0.35156248109360366 0.0526522854048221 259.6910436811483 97716.02908767702 0.01734524157117143 0.017345253326936573 8.582148886330323e-07 6.066403955434807 0.06611206240649192 KLS(ph)PENTTLK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSPENTTLK 10 1 H0Y3T7;A0A590UJV1;A0A590UJ07;Q5T890 H0Y3T7 ERCC6L2 DNA excision repair protein ERCC-6-like 2 1 KLS(0.703)PENT(0.088)T(0.209)LK 120.55 0.00042895 0.0 255100.0 291240.0 211860.0 212870.0 211250.0 249000.0 233260.0 252870.0 284080.0 261320.0 True False 240949.0944707575 277248.39323984773 225516.8345879855 233101.10079830096 227874.17315191857 247445.89863813954 256840.19719821948 251992.85299030185 232498.23307402933 259004.90810388338 0.9302877549104824 1.070436831755509 0.8707048690271681 0.8999871952419035 0.8798063898484939 0.9553714655433955 0.9916422012173002 0.972926941172987 0.8976595647398984 1.0 17.98261991146077 -6.506379489954608 24.56644695102132 0.9647590566238657 0.9314987938199463 0.07881994728357822 0.05761936780985964 1845.3530390508593 2747631.646232307 0.021727363873327726 0.01866192166923734 3.1161654640495406e-07 6.506379489954608 -0.03326026280391947 KLS(ph)PIIEDSR ddPTM_KYSE-520_SHP099_60min_R1 10 KLSPIIEDSR 10 1 O60566-3;O60566 O60566-3 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 KLS(1)PIIEDSR;KLS(1)PIIEDSR;KLS(1)PIIEDSR;KLS(1)PIIEDSR;KLS(1)PIIEDSR;KLS(1)PIIEDSR;KLS(1)PIIEDSR;KLS(1)PIIEDSR;KLS(0.998)PIIEDS(0.002)R;KLS(1)PIIEDSR 173.06 2.3825e-05 12570790000.0 18362940.0 17063500.0 16283660.0 15146170.0 16769720.0 16566950.0 15605670.0 16030550.0 19355870.0 16391210.0 True False 17344311.112586647 16243743.847164316 17333330.7783772 16585657.442937952 18089401.557345312 16463549.519851927 17183243.420262083 15974943.763608504 15841331.929775484 16245996.631568395 1.067605238750577 0.9998613329514238 1.0669293593657379 1.0209073545361658 1.113468257293302 1.0133911691118287 1.0576909382630597 0.9833157131503281 0.9750914203067981 1.0 23.953580914577454 -7.266579203132247 24.659733283809498 0.9844026673498423 1.0474660938146447 0.45676233161169555 0.031159389052643947 318.7947460141998 1529491.6381697394 0.01554894824214399 0.00783655225986624 5.412785248598507e-08 7.266579203132247 0.06306342646480245 KLS(ph)PPQKK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSPPQKK 8 2 Q8TAE6 Q8TAE6 PPP1R14C Protein phosphatase 1 regulatory subunit 14C 1 KLS(1)PPQKK 72.652 0.018955 0.0 12184000.0 9680800.0 6647500.0 10727000.0 6833000.0 8355000.0 7846400.0 10503000.0 7225600.0 4973200.0 True False 11508129.231798174 9215719.836822942 7076008.486376067 11746490.854809849 7370718.225548216 8302853.345870117 8639590.685484473 10466567.544418631 5913613.182553185 4929141.317091058 2.334712780884464 1.8696400131334876 1.4355458752706214 2.383070417169955 1.495335140826934 1.6844421394617393 1.7527577583397718 2.1234058573503214 1.1997248206393716 1.0 22.232904912586083 -10.77289134056335 0.16429168982896675 3.8526761788152635e-12 2.1318301119346144 0.4218008839669921 0.33360909290770957 37.666811972347624 0.9739407926493926 16.558901088763157 1.602948870850472 1.686975049698888e-11 10.77289134056335 2.131830111930762 KLS(ph)PTEPK ddPTM_KYSE-520_SHP099_60min_R1 11 KLSPTEPK 8 1 O14828-2;O14828 O14828-2 SCAMP3 Secretory carrier-associated membrane protein 3 1 KLS(0.949)PT(0.051)EPK;KLS(0.695)PT(0.305)EPK;KLS(0.851)PT(0.149)EPK;KLS(0.928)PT(0.072)EPK;KLS(0.745)PT(0.255)EPK;KLS(0.772)PT(0.228)EPK;KLS(0.797)PT(0.203)EPK;KLS(0.887)PT(0.113)EPK;KLS(0.917)PT(0.083)EPK;KLS(0.652)PT(0.348)EPK;KLS(0.876)PT(0.124)EPK 115.91 0.00065752 98109440000.0 40531500.0 40335500.0 35463110.0 35935550.0 38098230.0 38481080.0 37862450.0 39799200.0 43812520.0 37797670.0 True False 38283136.89745789 38397722.03518019 37749118.81358221 39350853.86758289 41096343.95172369 38240905.30588818 41689955.94790245 39661145.8644031 35857270.791750826 37462812.04994225 1.0218970440986133 1.024955680956133 1.0076424258610988 1.0503977601874537 1.0969903673258037 1.0207697504103175 1.1128357340694268 1.058680427180165 0.9571430661411362 1.0 25.15895586006161 -5.274547240320306 22.605206523936992 1.0491553220178371 1.0188441152551841 0.04753236047907217 0.042773881481818966 530.3450578194743 914608.2554956033 0.012026170388093496 0.017996595463656527 5.314381892493411e-06 5.274547240320306 -0.030311206762652976 KLS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 2 KLSPTK 6 1 O00257 O00257 CBX4 E3 SUMO-protein ligase CBX4 1 KLS(0.864)PT(0.136)K;KLS(0.875)PT(0.125)K 94.309 0.014838999999999998 3345600000.0 7011800.0 5133800.0 3840600.0 5296000.0 5890600.0 6731300.0 6885300.0 5457100.0 5849300.0 8630600.0 True False 6622841.476323242 4887164.542009095 4088171.2211772716 5799330.247699545 6354156.707070732 6689287.459851052 7581333.318052378 5438170.593796722 4787214.568853567 8554139.598505199 0.7742264900002984 0.5713215789537859 0.4779172906988405 0.6779559979022267 0.7428165783243816 0.7819941892250598 0.8862765484184038 0.6357355443143597 0.5596371807738693 1.0 23.02819132066138 -5.58475898311322 3.959864290227369 0.755515600228019 0.6004243191063631 0.2226647770132154 0.13306951976054818 0.3520817667299729 11.204738746214158 0.04075759665595548 0.054706092042999456 2.6016029531086233e-06 5.58475898311322 -0.15509128112165593 KLS(ph)PTKEAFGEQPLQLTTKPDLLAWDPAR ddPTM_KYSE-520_SHP099_60min_R1 2 KLSPTKEAFGEQPLQLTTKPDLLAWDPAR 29 3 O00257 O00257 CBX4 E3 SUMO-protein ligase CBX4 1 KLS(0.938)PT(0.062)KEAFGEQPLQLTTKPDLLAWDPAR;KLS(0.821)PT(0.179)KEAFGEQPLQLTTKPDLLAWDPAR 131.58 5.9922e-05 2927200000.0 1044780.0 1121060.0 1119760.0 708590.0 880020.0 918720.0 632910.0 809160.0 1345670.0 732310.0 True False 986823.9706827062 1067202.594854634 1191941.521279346 775934.1805546478 949272.5673711308 912985.927698119 696890.7194063484 806353.2128193629 1101330.2495801505 725822.3031285596 1.359594444024569 1.4703359076382752 1.6421946751176453 1.0690415232627706 1.3078580849326602 1.2578642510195894 0.9601395774179087 1.1109512746352455 1.5173552050316093 1.0 19.469256863189305 -5.2663185157447945 24.991728722789727 1.179435120540551 1.4886711005916387 0.4327742323289224 0.16569983370854982 387.9716078473013 1987255.7326998978 0.046498938065676385 0.07148615094064817 5.416035274749305e-06 5.2663185157447945 0.30923598005108754 KLS(ph)QRPTVAELLAR ddPTM_KYSE-520_SHP099_60min_R1 2 KLSQRPTVAELLAR 14 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 KLS(1)QRPTVAELLAR;KLS(1)QRPTVAELLAR 133.78 7.455800000000001e-06 7036700000.0 3009200.0 2864900.0 3426500.0 3209900.0 2972000.0 3080100.0 2889100.0 3363900.0 3173700.0 3024650.0 True False 2842273.6773085245 2727265.9036974274 3647377.6725938465 3514967.930908377 3205879.491633151 3060875.953394915 3181158.422898807 3352231.4160401653 2597436.0824663746 2997853.9541420937 0.9481027831197026 0.9097394154005406 1.2166628956538443 1.1724947194481552 1.0693914849332908 1.0210223714086355 1.0611452297412434 1.118210382266432 0.8664318283008859 1.0 21.51549867083304 -7.757447954934377 24.99793045445874 0.9332159074254709 1.0666921339315463 0.242664676055088 0.09277994432697703 142.22102440576177 890762.3482552044 0.07277319779903806 0.025206659587289744 1.7480427321477583e-08 7.757447954934377 0.13347622650607538 KLS(ph)S(ph)SS(ph)EPYEEDEFNDDQSIKK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSSSSEPYEEDEFNDDQSIKK 22 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 3 KLS(0.93)S(0.807)S(0.264)S(0.999)EPYEEDEFNDDQSIKK 159.66 1.3013e-09 1017100000.0 3966000.0 3891000.0 3360000.0 3439500.0 3542500.0 3655200.0 3562400.0 3814900.0 4582300.0 3578100.0 True False 3745998.0739750103 3704070.519489929 3576590.9761900827 3766389.045876616 3821274.5959321735 3632386.5409724046 3922522.1576735657 3801667.0023043533 3750269.830382727 3546400.8177196737 1.0562816406025073 1.044459075517481 1.0085129008316158 1.0620314057727953 1.0775078149201542 1.0242459123128727 1.1060571997599913 1.0719789436403342 1.057486173487333 1.0 21.757924169592815 -5.403945225699535 18.48206003937786 1.0615836582566438 1.0368887595662033 0.07852033411584036 0.02963431636980848 5.957338684080454 903.4829474010212 0.008071026731764186 0.011971250457133438 3.945070551489443e-06 5.403945225699535 -0.024694898690440503 KLS(ph)SAMSAAK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSSAMSAAK 10 1 A0A5K1VW95;P40925;P40925-3;B8ZZ51;B9A041;P40925-2 A0A5K1VW95 MDH1 Malate dehydrogenase, cytoplasmic 1 KLS(0.871)S(0.129)AMSAAK 112.15 0.00068638 3279300000.0 2557800.0 2339700.0 2520100.0 2222600.0 2207900.0 2306800.0 2362000.0 2392100.0 2709400.0 2317800.0 True False 2415913.7351521095 2227297.3000387014 2682549.6783025656 2433835.2357509425 2381649.16876744 2292402.405535985 2600774.0108985445 2383802.3634203374 2217441.258415852 2297266.095221111 1.05164732121273 0.9695425813631419 1.1677139552457336 1.0594485509597384 1.0367319544400482 0.997882835734509 1.1321170047774638 1.037669240136893 0.965252246149754 1.0 21.131486544900074 -7.627005080504068 5.432010584621112 0.9843036105064917 1.0585981921620866 0.23196875218680912 0.054883209938432244 0.31116131818647136 13.569142042368288 0.03925206367667186 0.014064964479488703 2.360450619776262e-08 7.627005080504068 0.07429458165559488 KLS(ph)SERPS(ph)SDGEGVVENGITTCNGK ddPTM_KYSE-520_SHP099_60min_R1 5 KLSSERPSSDGEGVVENGITTCNGK 25 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 2 KLS(0.985)S(0.019)ERPS(0.617)S(0.379)DGEGVVENGITTCNGK;KLS(0.698)S(0.291)ERPS(0.537)S(0.475)DGEGVVENGITTCNGK;KLS(0.501)S(0.501)ERPS(0.499)S(0.499)DGEGVVENGITTCNGK;KLS(0.913)S(0.065)ERPS(0.553)S(0.468)DGEGVVENGITTCNGK;KLS(0.814)S(0.258)ERPS(0.485)S(0.443)DGEGVVENGITTCNGK 128.12 7.7924e-05 7152630000.0 10390810.0 9740220.0 9435520.0 9760150.0 9685990.0 9509500.0 9381080.0 9717240.0 11817510.0 10003430.0 True False 9814411.055733806 9272285.210831715 10043748.716565778 10687751.72150391 10448222.30725565 9450147.683130085 10329411.116917893 9683533.162460873 9671748.079184309 9914807.392750775 0.9898741011257188 0.9351956970552104 1.0130049247259487 1.0779585823642195 1.0537998261968136 0.9531347719411648 1.0418166190974376 0.9766738554640003 0.9754852208481448 1.0 23.241153315936412 -4.78336539557527 24.29222914156558 1.0135359153134782 0.9625349230579284 0.20535363907943915 0.03834656906134034 231.71625754501747 256722.8632001205 0.010545033429084898 0.0219844815602292 1.6467762860225493e-05 4.78336539557527 -0.05100099225554977 KLS(ph)SERPSS(ph)DGEGVVENGITTCNGK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSSERPSSDGEGVVENGITTCNGK 25 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 2 KLS(0.971)S(0.048)ERPS(0.259)S(0.722)DGEGVVENGITTCNGK 103.52 0.0013720999999999998 804920000.0 979900.0 920980.0 969080.0 929270.0 791080.0 936700.0 968740.0 945440.0 1110300.0 993140.0 True False 925542.9936177788 876734.7383808364 1031548.4473828218 1017587.541404787 853333.4953705077 930853.7078487765 1066669.6931913013 942160.489307356 908697.5083852966 984341.552251228 0.9402661012338912 0.8906814269657818 1.047957840470749 1.0337748508914655 0.8669079278619299 0.9456612958376869 1.0836377787281108 0.9571479403186808 0.9231526458545507 1.0 19.908799471139144 KLS(ph)SGDLR ddPTM_KYSE-520_SHP099_60min_R1 5 KLSSGDLR 8 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KLS(0.985)S(0.015)GDLR;KLS(0.772)S(0.228)GDLR;KLS(0.5)S(0.5)GDLR;KLS(0.5)S(0.5)GDLR;KLS(0.921)S(0.079)GDLR 110.08 0.00071128 18912980000.0 21897700.0 18201400.0 17159100.0 15950100.0 16149200.0 17079200.0 16854100.0 16930100.0 19567700.0 16545200.0 True False 20682990.929017257 17326977.42314161 18265203.041530717 17465992.708427563 17420050.16362115 16972602.377592433 18557876.90816475 16871373.43461503 16014698.941575237 16398622.399970807 1.2612639296489976 1.0566117689966723 1.1138254541163917 1.0650890228717418 1.0622874128531774 1.0350017192677508 1.1316729207813083 1.0288287042114626 0.9765880664221981 1.0 23.96707128757878 -1.250231425228842 1.086528395542593 1.0506353127033385 199.99979500483087 0.6583876734401561 0.04490113890275197 992.8033757561874 1.613041037768181 0.014036022773662593 491719.16303178825 0.056204174666196004 1.250231425228842 198.94915969212752 KLS(ph)SIGIQVDCIQPVPK ddPTM_KYSE-520_SHP099_60min_R1 2 KLSSIGIQVDCIQPVPK 17 1 Q9Y2H0-3;Q9Y2H0 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 KLS(0.806)S(0.194)IGIQVDCIQPVPK;KLS(0.775)S(0.225)IGIQVDCIQPVPK 111.6 0.00017563 255940000.0 803560.0 795140.0 644820.0 558510.0 551120.0 760370.0 664500.0 732990.0 793180.0 785740.0 True False 758984.9249428537 756940.2808705283 686386.1289484784 611590.6224778449 594490.0085561447 755624.248785069 731674.1448950382 730447.4287711527 649158.5064406454 778778.9548964697 0.9745832500619546 0.971957801519117 0.8813619379837069 0.7853199147621411 0.7633616764017149 0.970267935508762 0.9395145314273502 0.9379393525962163 0.8335593846741071 1.0 19.570854372777596 -8.974937883119486 13.763681887149081 0.9999999928511779 0.8948035442648298 0.15186228635057009 0.0742073979928017 0.0 0.0 0.07880053565905948 0.019111937169267842 1.0594052404406381e-09 8.974937883119486 -0.10519644858634813 KLS(ph)SS(ph)S(ph)EPYEEDEFNDDQSIKK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSSSSEPYEEDEFNDDQSIKK 22 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 3 KLS(0.802)S(0.425)S(0.697)S(0.703)EPY(0.373)EEDEFNDDQSIKK 56.46 0.027085 1143000000.0 1805000.0 1711500.0 1545900.0 1641700.0 1617200.0 1701900.0 1681500.0 1762900.0 2070900.0 1678100.0 True False 1704873.0518217077 1629276.9709861244 1645551.1875274554 1797726.6744048954 1744464.4393906894 1691277.8108122477 1851482.4298585523 1756784.9113639535 1694876.7631406921 1663233.3395420432 1.0250354001989461 0.9795841222343051 0.9893688085765185 1.080862577526184 1.048839268620609 1.0168614172187809 1.1131826099447608 1.0562468113149228 1.0190252460952722 1.0 20.66555915177084 -5.24621886413302 24.414175968686436 1.051674329348337 0.9961549037205544 0.32182135681765167 0.03281315535587868 642.1546019011223 1030031.8543350573 0.008788947464986173 0.015145582246713937 5.672586614946224e-06 5.24621886413302 -0.05551942562778267 KLS(ph)SSDAPAQDTGSSAAAVETDASR ddPTM_KYSE-520_SHP099_60min_R1 3 KLSSSDAPAQDTGSSAAAVETDASR 25 1 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4;H0YIM6;H0YHT2 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 KLS(0.647)S(0.176)S(0.176)DAPAQDTGSSAAAVETDASR;KLS(0.636)S(0.182)S(0.182)DAPAQDTGSSAAAVETDASR;KLS(0.333)S(0.333)S(0.333)DAPAQDTGSSAAAVETDASR 224.27 1.0577e-21 3965150000.0 722650.0 660028.0 636350.0 545165.0 570100.0 815700.0 904940.0 986380.0 1258640.0 893410.0 True False 682563.1639329393 628319.2641577742 677370.139195999 596977.3176901656 614963.6265747163 810608.9137314485 996420.166563306 982958.4780028225 1030102.7037323873 885495.0824624625 0.7708266002277593 0.7095683269188675 0.7649620563812829 0.6741734985473196 0.6944856484855584 0.9154301698403972 1.1252690006954904 1.1100665576474182 1.1633070856450012 1.0 19.75612476952612 -6.52423699804011 2.863996151179208 1.1092577188896848 0.7222988506491604 0.9285715469736019 0.0491603864654661 0.06216546086823776 1.0369563006551394 0.019759995777039897 0.015607288547077245 2.9906321788596523e-07 6.52423699804011 -0.3869588682405244 KLS(ph)SSS(ph)EPYEEDEFNDDQSIKK ddPTM_KYSE-520_SHP099_60min_R1 2 KLSSSSEPYEEDEFNDDQSIKK 22 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 2 KLS(0.988)S(0.012)S(0.007)S(0.993)EPYEEDEFNDDQSIKK;KLS(0.986)S(0.013)S(0.007)S(0.994)EPYEEDEFNDDQSIKK 174.49 4.7359e-10 1386600000.0 1006870.0 832270.0 757690.0 835230.0 841770.0 862790.0 740630.0 716760.0 1028440.0 784090.0 True False 951016.9139544157 792286.499937261 806531.9097468642 914610.008078943 908012.5099838603 857405.0075743006 815500.1082522378 714273.7268530418 841701.220862626 777143.5726127888 1.223733872953562 1.019485366485836 1.03781584017387 1.1768867945519854 1.1683973746718188 1.1032774866704098 1.0493557908617746 0.9191013758907174 1.0830704267845794 1.0 19.567821626946436 -6.884264175320109 3.4442292618204813 0.9983165372357119 1.1182006997947822 0.3867065904410457 0.06873957819119961 0.26078446881615075 6.016509432693336 0.03175017465887618 0.02045504070852522 1.305376604066299e-07 6.884264175320109 0.1198841625590703 KLS(ph)VPT(ph)S(ph)DEEDEVPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 7 KLSVPTSDEEDEVPAPKPR 19 2 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 3 KLS(1)VPT(1)S(1)DEEDEVPAPKPR;KLS(1)VPT(1)S(1)DEEDEVPAPKPR;KLS(1)VPT(1)S(1)DEEDEVPAPKPR;KLS(1)VPT(1)S(1)DEEDEVPAPKPR;KLS(1)VPT(1)S(1)DEEDEVPAPKPR;KLS(1)VPT(1)S(1)DEEDEVPAPKPR;KLS(1)VPT(1)S(1)DEEDEVPAPKPR 106.88 0.00044121 26569500000.0 21099670.0 21271990.0 18806430.0 19812270.0 18389320.0 17974170.0 18364170.0 21974960.0 23370960.0 19718110.0 True False 19929229.24395067 20250051.67049204 20018722.569151916 21695222.18402384 19836454.863081846 17861986.53785018 20220599.520627726 21898733.99275423 19127382.79795771 19543422.885857463 1.0197409819327194 1.0361568589474635 1.0243201861859317 1.1101035018652499 1.014993892264207 0.9139640810196022 1.034649848121554 1.1205168163557049 0.9787120152733931 1.0 24.220179831005243 -2.9539151032207656 13.416301556876125 1.028172353659074 1.0338276663975137 0.0 0.05647039780955912 0.0 0.0 0.013282451132111298 0.0 0.0011119490721307442 2.9539151032207656 0.005655312738439777 KLS(ph)VPTS(ph)DEEDEVPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 2 KLSVPTSDEEDEVPAPKPR 19 2 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 2 KLS(0.609)VPT(0.418)S(0.973)DEEDEVPAPKPR;KLS(0.821)VPT(0.214)S(0.965)DEEDEVPAPKPR 117.82 2.7498000000000003e-05 10269300000.0 1958670.0 1790750.0 1551520.0 1730040.0 1673260.0 1586940.0 1633740.0 1731710.0 2102730.0 1727500.0 True False 1850018.6705881564 1704719.6820294512 1651533.4617197742 1894462.4814445062 1804936.0424529219 1577035.3188144942 1798894.382965868 1725703.1021941525 1720927.2375096949 1712195.6939746642 1.0804948739787752 0.9956336696958639 0.9645705029697454 1.1064520767755996 1.0541645728958537 0.9210602061225777 1.0506359695309961 1.007888939486895 1.0050996177398166 1.0 20.707416172109973 KLS(ph)WT(ph)FLNK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSWTFLNK 9 1 Q8WUJ3-2;Q8WUJ3 Q8WUJ3-2 CEMIP Cell migration-inducing and hyaluronan-binding protein 2 KLS(1)WT(1)FLNK 56.563 0.022787 487650000.0 138920.0 1656300.0 534330.0 271170.0 504890.0 583010.0 473800.0 840920.0 1633100.0 161280.0 True False 131213.83066984575 1576728.8618430144 568773.7667582281 296941.9152697663 544621.9705688634 579371.2183334207 521696.3278423917 838003.0447922032 1336570.2071008096 159851.18467394137 0.8208499107309774 9.863729599872334 3.5581454583423455 1.8576147300719579 3.407056204680394 3.6244411920699933 3.263637544548255 5.24239495942136 8.361340642092186 1.0 17.286369910559543 -7.32362398961368 8.468806444967239 5.3597306499797845 3.9044067779998035 0.021055665426924386 2.7945572378823997 1.3502432929676242 171.87097019663193 1.499948205933853 0.7180742953880903 4.746527598294108e-08 7.32362398961368 -1.455323871979981 KLSAS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 KLSASSPR 8 1 A0A0A0MRY2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326-5;Q15326-2;Q15326;Q15326-4;Q15326-6;Q15326-3 A0A0A0MRY2 ZMYND11 Zinc finger MYND domain-containing protein 11 1 KLS(0.134)AS(0.775)S(0.091)PR 67.153 0.017205 2043500000.0 5010300.0 4853400.0 4451200.0 4523000.0 4709200.0 4486300.0 4237500.0 4403900.0 5470800.0 4591000.0 True False 4732368.671214567 4620235.37889808 4738131.474171814 4952864.5601104675 5079787.248317237 4458299.337591509 4665867.854014632 4388623.898777983 4477440.627645038 4550327.311743948 1.0400062120807856 1.015363305178884 1.0412726710764657 1.0884633611581327 1.1163564509319595 0.9797755264956604 1.0253916991800756 0.9644633447469539 0.9839821008236492 1.0 22.117538893546715 -6.291404240548147 24.98373303419768 0.9906683072584659 1.0583047504150394 0.5760284349063358 0.029818271329552132 585.8350064533 488448.3110750639 0.01158169710135413 0.010215416346869127 5.112057845661178e-07 6.291404240548147 0.06763644315657347 KLSASS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 KLSASSPR 8 1 A0A0A0MRY2;B0QZE2;B7Z2J6;E7ENI9;J3QKD2;Q15326-5;Q15326-2;Q15326;Q15326-4;Q15326-6;Q15326-3 A0A0A0MRY2 ZMYND11 Zinc finger MYND domain-containing protein 11 1 KLS(0.111)AS(0.349)S(0.54)PR 56.358999999999995 0.032052 1746000000.0 3844500.0 3867500.0 3401400.0 3556900.0 3703800.0 3566000.0 3391800.0 3676000.0 4321800.0 3423500.0 True False 3631237.92117925 3681699.4947641506 3620659.686432423 3894946.7065790207 3995267.9882607176 3543743.271259466 3734676.2447780124 3663248.8139848514 3537070.063712128 3393170.4534426997 1.0701607747099788 1.085032286258626 1.0670432670893126 1.1478782925942375 1.177443940137794 1.0443752590336262 1.1006450445154685 1.0795946930010931 1.0424086005238635 1.0 21.694202473926488 -7.912262351709812 1.1108904965650561 0.9996250868095516 1.1021040673493863 0.43270248826837077 0.03680645192846521 0.49561264158556184 1.3658001600702452 0.03714905377065727 0.01210630509342663 1.2238766477716333e-08 7.912262351709812 0.10247898053983462 KLSDAS(ph)DER ddPTM_KYSE-520_SHP099_60min_R1 2 KLSDASDER 9 1 E7ER68;Q658Y4 E7ER68 FAM91A1 Protein FAM91A1 1 KLS(0.196)DAS(0.804)DER;KLS(0.11)DAS(0.89)DER 126.48 0.00068235 8621200000.0 9245300.0 8009200.0 7126600.0 8163400.0 8342800.0 8292800.0 8896100.0 9097600.0 9186100.0 8416800.0 True False 8732444.778951382 7624426.009945699 7585992.038963157 8939247.081584297 8999330.895961324 8241041.559142031 9795404.605569225 9066042.548995793 7518135.802736356 8342233.700171321 1.0467753712979833 0.9139549770451911 0.9093478211725675 1.0715651710165728 1.0787675362986424 0.9878698985587983 1.174194461294948 1.0867643936670832 0.9012137603603648 1.0 22.99200229792096 -5.269725657833819 24.529717193478955 1.05119675079048 0.9524189475996967 0.20369591781112895 0.07676753733533666 645.6937132343708 1911436.1765954483 0.021623784375784962 0.032699412046910376 5.373711444769225e-06 5.269725657833819 -0.09877780319078333 KLSDAS(ph)DERGEPDLASGSDVNGSTESFEMVIEEATIDSATK ddPTM_KYSE-520_SHP099_60min_R1 3 KLSDASDERGEPDLASGSDVNGSTESFEMVIEEATIDSATK 41 2 E7ER68;Q658Y4 E7ER68 FAM91A1 Protein FAM91A1 1 KLS(0.41)DAS(0.482)DERGEPDLAS(0.022)GS(0.022)DVNGS(0.022)T(0.022)ES(0.022)FEMVIEEATIDSATK;KLS(0.456)DAS(0.543)DERGEPDLASGSDVNGSTESFEMVIEEATIDSATK;KLS(0.397)DAS(0.601)DERGEPDLASGSDVNGS(0.001)T(0.001)ESFEMVIEEATIDSATK 129.57 9.4722e-06 120915000.0 64212.0 75105.0 73583.0 51047.0 54904.0 55705.0 50908.0 60368.0 91862.0 57360.0 True False 60650.03235655152 71496.84306509672 78326.27791696264 55898.49153215981 59224.632438972585 55357.32443227943 56054.2774542011 60158.597497997114 75182.17645257148 56851.83502540473 1.0668087024710728 1.2575995661907438 1.3777264688459374 0.9832310866866669 1.0417365140897834 0.9737121837411673 0.9859712958984133 1.0581645688501475 1.3224230390976066 1.0 15.794919295761531 -5.276445442663181 24.930574967206287 1.0481375239932413 1.2364003889198265 0.3304189392682906 0.11852920603557132 862.1807471141709 1432396.6740841216 0.034249187637892135 0.05103215173322877 5.291204626872151e-06 5.276445442663181 0.18826286492658517 KLSDHS(ph)VR ddPTM_KYSE-520_SHP099_60min_R1 1 KLSDHSVR 8 1 Q96Q42;Q96Q42-3;Q96Q42-2 Q96Q42 ALS2 Alsin 1 KLS(0.008)DHS(0.992)VR 112.83 0.0006859 948760000.0 607890.0 609210.0 549390.0 562740.0 558300.0 589210.0 583470.0 607120.0 755190.0 660330.0 True False 574169.1299013287 579942.6371571475 584804.5584550793 616222.6404060497 602235.0337075327 585532.5218336475 642452.8417184472 605014.0424228727 618066.5327906805 654479.989928967 0.8772905799054992 0.8861120982783458 0.8935407765767602 0.9415454252053306 0.9201733329889816 0.8946530540944383 0.9816233522864081 0.9244194654271051 0.9443627647924904 1.0 19.319989558323822 -1.0000000000000073 0.0701745154382284 1.0822398690082742 0.5546769580201821 0.6859648909397933 0.02183628328528562 146.59298632602938 0.7611753559386767 0.9972090965453703 7.638876702907566 0.09999999999999831 1.0000000000000073 -0.527562910988092 KLSELLR ddPTM_KYSE-520_SHP099_60min_R1 2 KLSELLR 7 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 152.63 0.0030951999999999998 3152100000.0 7443000.0 6418900.0 4762900.0 4342400.0 7173600.0 6787700.0 5130300.0 5915800.0 5348800.0 5422900.0 False True 7030121.952747343 6110526.409034667 5069924.154909445 4755100.390409831 7738121.507799304 6745335.446530528 5648920.79090296 5895279.470558105 4377592.752275308 5374857.324952359 1.3079643844889697 1.1368722999710188 0.9432667414952047 0.8846933235482634 1.439688728457158 1.2549794420059917 1.0509899052907474 1.0968252949133601 0.8144574800065244 1.0 22.357795028339645 -7.635701802947949 5.6325525421082645 0.9099993903295069 1.138241370871781 0.2513344170310835 0.16150181356604928 0.3156708273314381 14.046231957483826 0.12259150592007455 0.044108961187558075 2.3136528546901165e-08 7.635701802947949 0.22824198054227396 KLSFLS(ph)WGTNK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSFLSWGTNK 11 1 Q8IUC4-2;A8MT19;Q8IUC4 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 KLS(0.446)FLS(0.554)WGTNK 214.89 7.202400000000001e-10 1224700000.0 2089700.0 1952600.0 2122600.0 2153800.0 2231400.0 1902500.0 2013600.0 2172700.0 2689000.0 1676800.0 True False 1973780.1752863277 1858794.1650876491 2259426.19228008 2358496.504436417 2406998.485070728 1890625.7918034568 2217154.338842213 2165163.4108119914 2200745.3841737052 1661944.8565306582 1.1876327710455037 1.1184451504413435 1.3595073166246177 1.4191183872128126 1.4483022560058845 1.1375983892451007 1.3340721445298525 1.3027889597563493 1.3241987996929112 1.0 20.664441083484437 -10.473161905577637 7.384292419454874 0.9999620826773926 1.294553680219973 0.40505981338124863 0.10628432907541241 7.080174665502912e-05 5.05116927008115e-06 0.10981975573351324 0.026631786224963396 3.363861407829898e-11 10.473161905577637 0.29459159754258046 KLSFT(ph)ESLTSGASLLTLNK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSFTESLTSGASLLTLNK 19 1 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 KLS(0.347)FT(0.563)ES(0.09)LT(0.001)SGASLLTLNK 138.44 5.8951e-06 835210000.0 313490.0 416240.0 370730.0 282850.0 304010.0 373510.0 287110.0 347060.0 395490.0 264100.0 True False 296100.0847731786 396243.20561102225 394627.8489889731 309731.9789580468 327933.85741971515 371178.7855435008 316133.8807235736 345856.12986441335 323678.9854915795 261760.2794666908 1.1311879914571132 1.5137636864474868 1.5075925567965702 1.1832657712204975 1.2528022131082917 1.4180103501560235 1.2077228881618838 1.3212704791156973 1.2365473713240283 1.0 17.99788666811408 -10.8852158734814 0.23663962116521112 0.6525210444302312 1.371084293603212 0.372869528365687 0.1239217280332279 31.15401218306405 1.1540106253417648 6.235623064092731 0.22767660686123206 1.3025191781364533e-11 10.8852158734814 0.7185632491729808 KLSFTES(ph)LTSGASLLTLNK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSFTESLTSGASLLTLNK 19 1 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 KLS(0.282)FT(0.282)ES(0.436)LTSGASLLTLNK 179.5 1.4152e-09 842360000.0 581870.0 744610.0 621730.0 472680.0 523840.0 669370.0 492210.0 575340.0 727000.0 439130.0 True False 549592.5111709118 708837.8179176031 661807.7106031728 517603.3650835755 565063.2277581114 665192.2135398051 541967.3903066773 573344.2798253659 594995.1261786098 435239.6498379706 1.262735395030099 1.6286149898831288 1.5205593305884426 1.1892376194959877 1.2982806781699945 1.5283355130614602 1.2452160333012834 1.31730709745495 1.3670517527530233 1.0 18.73145046489222 -12.966064988066625 0.17361317822382014 7.314300942092608e-10 1.4703926512232124 0.42632800130808746 0.13280835030729593 87.43794740026742 1.1511655508675722 31.140555268579725 0.4874221479254092 1.081272137030254e-13 12.966064988066625 1.4703926504917824 KLSS(ph)GETVTYQK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSSGETVTYQK 12 1 E2QRF0;Q70EL2-3;Q70EL2 E2QRF0 USP45 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 45 1 KLS(0.272)S(0.528)GET(0.194)VT(0.006)YQK 125.22 0.00010312 512040000.0 515660.0 455050.0 475390.0 424620.0 448340.0 511120.0 444640.0 485350.0 532460.0 541930.0 True False 487055.3118572749 433188.7149560253 506034.4000508935 464975.7571333415 483621.80729434895 507929.91048966325 489588.5504682167 483666.43413154193 435778.6862242949 537128.9218151595 0.9067754352369127 0.806489275409186 0.9421097608015856 0.8656688147828915 0.9003831066478603 0.9456387281719594 0.9114916933046798 0.9004661906810979 0.8113111555260062 1.0 19.034908880227277 -4.771336004024423 24.999735990817108 0.9055305979610546 0.8566323424830284 0.13704571827741452 0.05239635162192115 362.8939638728397 916708.1748579863 0.013074011126933335 0.02775076265913437 1.69302743577288e-05 4.771336004024423 -0.048898255478026176 KLSS(ph)S(ph)S(ph)EPYEEDEFNDDQSIKK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSSSSEPYEEDEFNDDQSIKK 22 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 3 KLS(0.61)S(0.658)S(0.737)S(0.995)EPYEEDEFNDDQSIKK 68.074 0.056629 358120000.0 197070.0 196570.0 155940.0 152230.0 180320.0 166370.0 158280.0 174490.0 249560.0 186960.0 True False 186138.13425069477 187126.48214241472 165992.14191282185 166697.89343038143 194510.15811954578 165331.62311818206 174280.48706393788 173884.73491627196 204246.19489564488 185303.67985267888 1.004503172299003 1.009836838055159 0.8957843796992581 0.8995930008670658 1.0496831917973042 0.8922198590423293 0.9405128230723496 0.9383771280447033 1.1022241709286387 1.0 17.49953200584245 -7.7477739817888525 24.999769687489902 1.051112094077338 0.9526386981654801 0.3305737015952952 0.055363536512607406 228.17966331360464 417441.7630512295 0.037724557674087736 0.014086807383722571 1.78741755169834e-08 7.7477739817888525 -0.09847339591185789 KLSSERPS(ph)SDGEGVVENGITTCNGK ddPTM_KYSE-520_SHP099_60min_R1 4 KLSSERPSSDGEGVVENGITTCNGK 25 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KLS(0.065)S(0.05)ERPS(0.442)S(0.442)DGEGVVENGITTCNGK;KLS(0.064)S(0.064)ERPS(0.436)S(0.436)DGEGVVENGITTCNGK;KLS(0.1)S(0.1)ERPS(0.4)S(0.4)DGEGVVENGITTCNGK;KLS(0.125)S(0.125)ERPS(0.375)S(0.375)DGEGVVENGITTCNGK 199.8 9.922e-16 5905430000.0 1970870.0 2019340.0 2100300.0 1955600.0 2013550.0 1862190.0 1623160.0 1797320.0 2418310.0 1744470.0 True False 1861541.9122680589 1922327.8753088673 2235688.698598819 2141459.6360274227 2172004.9294676767 1850567.3814656935 1787244.8533150214 1791085.5164176414 1979205.8646341055 1729015.3529771233 1.076648572878629 1.1118049773235887 1.2930415538238424 1.2385428691191942 1.2562091630521308 1.0703013008411257 1.0336778387986174 1.0358991395499422 1.1447011509910476 1.0 20.721519248926473 -6.341205358787663 6.792584142651034 1.056607795712657 1.1982401912059741 0.4979593195006712 0.06947019612428025 0.23847453133699248 17.219036903170313 0.026465735113623535 0.023311322559026015 4.558213270966978e-07 6.341205358787663 0.1416323954933172 KLSSERPSS(ph)DGEGVVENGITTCNGK ddPTM_KYSE-520_SHP099_60min_R1 1 KLSSERPSSDGEGVVENGITTCNGK 25 2 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KLS(0.036)S(0.036)ERPS(0.14)S(0.788)DGEGVVENGITTCNGK 114.79 0.00024164 2924700000.0 312490.0 311450.0 312870.0 277520.0 268620.0 290800.0 252820.0 271750.0 346490.0 271350.0 True False 295155.55676662864 296487.4745040192 333038.1008096996 303895.4173605693 289758.86576127046 288985.0093332171 278377.51288542297 270807.36267692666 283576.1503021 268946.05010710546 1.0974526550922963 1.1024050153774172 1.238308205965732 1.1299493606228668 1.0773865823494209 1.074509215577367 1.0350682331068313 1.0069207655925043 1.0543978994641052 1.0 18.036957275289385 -6.177488213881947 1.3930377730972658 1.0251882409516153 1.1456118786053289 0.6241214676306794 0.04010372955510718 0.29139921349166553 1.1442707960867746 0.019009903392914 0.018401168920812994 6.645257069203708e-07 6.177488213881947 0.12042363765371356 KLSSWDQAET(ph)PGHT(ph)PSLR ddPTM_KYSE-520_SHP099_60min_R1 2 KLSSWDQAETPGHTPSLR 18 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 KLSSWDQAET(1)PGHT(0.998)PS(0.002)LR;KLSSWDQAET(1)PGHT(0.992)PS(0.008)LR 146.5 5.0837e-06 1655640000.0 1249680.0 1437940.0 1291580.0 1611480.0 1218070.0 1321380.0 1018360.0 1269390.0 1547060.0 1359680.0 True False 1180357.7592246826 1368859.2040080559 1374837.3134010665 1764634.574690869 1313925.1791297398 1313132.7772789763 1121305.7670358347 1264986.7823678534 1266152.902208915 1347634.2930150316 0.8758739409813436 1.015749755777985 1.020185758500679 1.3094313374460753 0.9749864528826473 0.9743984581611782 0.8320549371945432 0.9386721523223688 0.9395374611432452 1.0 20.36199761537291 -5.98789001351516 24.995621469947007 0.9318944557857564 1.0615047082295632 0.2108072225151123 0.10781669817326683 348.6927080023577 719714.8713247691 0.03492451313339934 0.039573692324760594 1.028276679555011e-06 5.98789001351516 0.12961025244380686 KLSVPT(ph)S(ph)DEEDEVPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 12 KLSVPTSDEEDEVPAPKPR 19 2 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 2 KLS(0.048)VPT(0.958)S(0.994)DEEDEVPAPKPR;KLS(0.022)VPT(0.989)S(0.989)DEEDEVPAPKPR;KLS(0.018)VPT(0.984)S(0.999)DEEDEVPAPKPR;KLS(0.037)VPT(0.966)S(0.996)DEEDEVPAPKPR;KLS(0.022)VPT(0.979)S(0.999)DEEDEVPAPKPR;KLS(0.153)VPT(0.853)S(0.994)DEEDEVPAPKPR;KLS(0.002)VPT(0.998)S(1)DEEDEVPAPKPR;KLS(0.131)VPT(0.88)S(0.989)DEEDEVPAPKPR;KLS(0.026)VPT(0.98)S(0.993)DEEDEVPAPKPR;KLS(0.001)VPT(1)S(1)DEEDEVPAPKPR;KLS(0.01)VPT(0.99)S(1)DEEDEVPAPKPR;KLS(0.028)VPT(0.972)S(0.999)DEEDEVPAPKPR 151.06 4.9216000000000004e-06 23637550000.0 13391640.0 13836810.0 12727060.0 12077030.0 11577050.0 12051190.0 11622350.0 12154460.0 14742960.0 12999520.0 True False 12648779.033627512 13172068.878124766 13547466.651615998 13224827.300108537 12488097.970596075 11975974.053048056 12797250.561205197 12112299.015132291 12066010.103777431 12884354.366273528 0.9817161709505083 1.0223305338918935 1.0514664737162347 1.0264253003414934 0.9692451492397085 0.9294974131103321 0.9932395677274807 0.9400780722732842 0.9364854272684225 1.0 23.619116909914112 -5.81883683625024 4.872045212495336 0.9575097560285758 1.022957807737313 0.5377972361352703 0.0267930680969731 0.1477858338181423 7.133928510552369 0.008368566519394697 0.009748270250579484 1.5176204279609972e-06 5.81883683625024 0.06544805170873713 KLSVPT(ph)SDEEDEVPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 3 KLSVPTSDEEDEVPAPKPR 19 2 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KLS(0.006)VPT(0.497)S(0.497)DEEDEVPAPKPR;KLSVPT(0.626)S(0.374)DEEDEVPAPKPR;KLSVPT(0.591)S(0.408)DEEDEVPAPKPR 172.42 5.0036e-09 6585680000.0 2279210.0 2256510.0 2154660.0 2190050.0 2135570.0 2074330.0 1749890.0 1887320.0 2261950.0 1978230.0 True False 2152777.677807509 2148103.872509438 2293552.8311778917 2398191.6935374592 2303627.209268844 2061383.3370363559 1926785.958480631 1880773.327423799 1851236.8991192644 1960704.4212396524 1.097961352301342 1.095577614473528 1.1697596059521282 1.223127600243389 1.1748977481329794 1.0513483392530167 0.9827008791373171 0.9592334811152632 0.9441692888869107 1.0 20.90294063307832 -6.528592066593618 2.6718727894916023 0.9670415860121229 1.1536278864368383 0.8360206661755484 0.037729596801484924 0.12024021027176796 1.7355605355238173 0.01791229367775391 0.014034572742639508 2.9607922370615806e-07 6.528592066593618 0.18658630042471547 KLSVPTS(ph)DEEDEVPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 8 KLSVPTSDEEDEVPAPKPR 19 2 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 KLSVPT(0.142)S(0.857)DEEDEVPAPKPR;KLSVPT(0.031)S(0.968)DEEDEVPAPKPR;KLSVPT(0.038)S(0.962)DEEDEVPAPKPR;KLS(0.007)VPT(0.191)S(0.802)DEEDEVPAPKPR;KLSVPT(0.029)S(0.97)DEEDEVPAPKPR;KLSVPT(0.018)S(0.982)DEEDEVPAPKPR;KLS(0.01)VPT(0.171)S(0.818)DEEDEVPAPKPR;KLSVPT(0.149)S(0.851)DEEDEVPAPKPR 177.22 2.1911e-09 18158780000.0 5474170.0 5710440.0 4984530.0 4594140.0 4886680.0 4820010.0 4543290.0 4467670.0 5855590.0 5032900.0 True False 5170506.877612645 5436101.890854809 5305840.779329982 5030765.684321441 5271233.914594174 4789926.529698076 5002570.0914374385 4452172.695532018 4792362.463411562 4988312.421536954 1.0365242672630266 1.0897677273349062 1.0636544648691417 1.00851054609194 1.0567168751972533 0.9602298583019078 1.0028582151027523 0.8925208205303738 0.9607181865194767 1.0 22.250120394332775 -6.262157808461166 1.1347730448307363 0.9492483946472812 1.0606683465832116 0.5884025174151115 0.03566674868790947 0.3079526608474847 0.8222191272288969 0.018093482359698813 0.016304070927112328 5.46817231228673e-07 6.262157808461166 0.11141995193593046 KLT(ph)GMER ddPTM_KYSE-520_SHP099_60min_R1 4 KLTGMER 7 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 KLT(1)GMER;KLT(1)GMER;KLT(1)GMER;KLT(1)GMER 109.42 0.0054452 676550000.0 1724260.0 1493590.0 1348260.0 1440110.0 1559530.0 1479810.0 1321240.0 1542110.0 1845650.0 1448020.0 True False 1628611.860572908 1421835.694475703 1435170.996892273 1576977.6214151387 1682256.1384881057 1470573.9568823513 1454803.8332597765 1536760.7803411803 1510526.485050277 1435191.6693425134 1.1347695888724074 0.9906939434278287 0.9999855960352321 1.098792346068717 1.1721473684826897 1.024653353482777 1.0136651879579595 1.0707704156652451 1.0524911183063623 1.0 20.452811990507026 -9.182202595455319 8.706039487754133 0.9999982045919966 1.060135734294832 0.09775034328490728 0.056250689913476336 0.0 0.0 0.05676009678453228 0.013766345550759293 6.57351115944129e-10 9.182202595455319 0.06013752970283548 KLT(ph)PMQK ddPTM_KYSE-520_SHP099_60min_R1 1 KLTPMQK 7 1 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 KLT(1)PMQK 82.029 0.014718 544720000.0 627070.0 584300.0 516130.0 408500.0 491560.0 538320.0 441150.0 520480.0 661210.0 532150.0 True False 592285.1770669465 556229.3509478197 549400.565637199 447323.7171799964 530242.9754061882 534960.1452003344 485745.7472090993 518674.5763609449 541150.9317476733 527435.5650064352 1.1229526720666252 1.0545920447003478 1.041644898615238 0.8481106448984697 1.0053227552065411 1.0142663496607542 0.9209575148827379 0.9833894617148479 1.0260038716597937 1.0 19.008635329917773 -4.8409099489525484 2.7385677948595704 0.9707920212987817 1.0977739519384944 0.4453755102441218 0.05282044136019339 0.23928777352801997 3.5669615861690946 0.014380472750522115 0.03975601767761815 1.4424144054340393e-05 4.8409099489525484 0.12698193063971264 KLT(ph)S(ph)DEEGEPSGK ddPTM_KYSE-520_SHP099_60min_R1 1 KLTSDEEGEPSGK 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 2 KLT(0.992)S(0.533)DEEGEPS(0.475)GK 99.566 0.0040648 360430000.0 1063400.0 927620.0 879020.0 983990.0 1026200.0 963660.0 996820.0 1011900.0 1127800.0 1040000.0 True False 1004411.0821646566 883055.742813994 935683.0356817271 1077508.1137526194 1106956.1017207052 957645.4404884735 1097588.2936256912 1008389.9550792365 923019.9495243957 1030786.4091077563 0.9744124226803397 0.8566815928222828 0.9077370708560756 1.0453262715069216 1.0738947389487614 0.9290435264056369 1.0648067183731673 0.9782724589394751 0.8954521920048959 1.0 19.975313989862805 -5.241739519419134 23.59392695341295 1.0002668787705284 0.9073174473442922 0.3001283289475164 0.0593510026312845 468.91887459560695 561607.3204604773 0.01618197517286856 0.027965393855192432 5.731396848939456e-06 5.241739519419134 -0.09294943142623624 KLT(ph)SDEEGEPSGK ddPTM_KYSE-520_SHP099_60min_R1 2 KLTSDEEGEPSGK 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KLT(0.5)S(0.5)DEEGEPSGK;KLT(0.805)S(0.195)DEEGEPSGK 154.51 6.4809e-06 2189200000.0 3753830.0 3224070.0 3246090.0 3097940.0 3382450.0 3322300.0 3121170.0 3374340.0 3701580.0 3166360.0 True False 3545597.5668254206 3069180.8377722716 3455338.1553276405 3392367.286170374 3648629.571492109 3301564.2933553895 3436688.323283741 3362635.20211688 3029466.3812382678 3138308.5137908026 1.1297798005660853 0.9779729508062193 1.1010192720517122 1.0809540461886238 1.1626102263237603 1.0520203092994793 1.0950766338560263 1.0714801261062477 0.9653182177360049 1.0 21.581555753828336 -7.70976598815278 6.1061440904171 0.9827792388983617 1.0832739680242078 0.4313545440856328 0.04655060199541818 0.1659269507966941 13.377734216847836 0.033070754592787265 0.01170327878478387 1.950895521905743e-08 7.70976598815278 0.10049472912584612 KLTAS(ph)PSDPK ddPTM_KYSE-520_SHP099_60min_R1 2 KLTASPSDPK 10 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 KLT(0.02)AS(0.98)PSDPK;KLT(0.099)AS(0.901)PSDPK 125.97 0.00027866 2552100000.0 7216800.0 6496700.0 6235200.0 5976000.0 6510800.0 5956600.0 5989500.0 6352000.0 7803100.0 5870300.0 True False 6816469.717665875 6184588.780254486 6637130.968672736 6543957.243250086 7023162.918615447 5919422.649911416 6594977.111886878 6329966.394567951 6386253.740143481 5818293.709024287 1.1715582022085613 1.0629557546505548 1.1407349474947297 1.1247210214053445 1.2070829129375826 1.0173812024529247 1.1334898926910375 1.0879420515932445 1.0976162530671625 1.0 22.472164695232582 -9.678455686771978 0.28071859382356235 0.9430826946541343 1.135124423527928 0.3683757397747074 0.04908140280109022 12.320051166004562 1.0103009265789793 0.6647747574006471 0.06438648752281054 2.0967387100663262e-10 9.678455686771978 0.19204172887379378 KLTS(ph)DEEGEPSGK ddPTM_KYSE-520_SHP099_60min_R1 8 KLTSDEEGEPSGK 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KLT(0.021)S(0.979)DEEGEPSGK;KLT(0.011)S(0.989)DEEGEPSGK;KLT(0.027)S(0.973)DEEGEPSGK;KLT(0.065)S(0.935)DEEGEPSGK;KLT(0.247)S(0.753)DEEGEPSGK;KLT(0.05)S(0.95)DEEGEPSGK;KLT(0.206)S(0.794)DEEGEPSGK;KLT(0.184)S(0.816)DEEGEPSGK 265.56 3.7075999999999997e-22 6912820000.0 8741930.0 7735050.0 7157170.0 7345040.0 7628660.0 7568800.0 7551020.0 7700300.0 8980940.0 7402450.0 True False 8256997.716294583 7363446.587453247 7618532.630076885 8043110.393233209 8228992.140862083 7521560.311696199 8314350.792453469 7673589.456563534 7350227.687073617 7336870.052018952 1.1254114707977458 1.0036223260390147 1.0383900186402273 1.0962590772641414 1.1215943696041937 1.0251728950312298 1.133228574787901 1.0458941486161288 1.0018206176421225 1.0 22.806733302219 -7.627334346490704 4.043895684472805 1.0013971509683992 1.074608130055969 0.3431772633316149 0.04194356882040841 0.2663585236447175 7.764225716853495 0.032313477124293694 0.010860171455246202 2.3586616918003897e-08 7.627334346490704 0.07321097908756968 KLTS(ph)DEEGEPSGKR ddPTM_KYSE-520_SHP099_60min_R1 3 KLTSDEEGEPSGKR 14 2 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KLT(0.091)S(0.909)DEEGEPSGKR;KLT(0.054)S(0.943)DEEGEPS(0.003)GKR;KLT(0.078)S(0.921)DEEGEPS(0.001)GKR 163.18 2.3251e-08 6665300000.0 3495010.0 3090020.0 3089280.0 2525740.0 2673920.0 2718740.0 2464100.0 2686640.0 3669340.0 2801770.0 True False 3301134.8281702963 2941570.8009854225 3288419.9318227638 2765785.57020858 2884342.291476347 2701771.3351946045 2713195.2752985163 2677320.672906489 3003080.352534 2776948.497544074 1.1887634326275087 1.059281727258154 1.184184703004407 0.9959801460684753 1.03867331138019 0.9729281394970213 0.9770419860858274 0.96412327246051 1.0814317785115266 1.0 21.40506898989945 -5.273076694384479 24.722162063226637 1.0018042685404094 1.135597130825545 0.6534769013921018 0.046492314809853524 370.681038376768 787468.9027434889 0.012538726663042229 0.01878224016365919 5.332407193427745e-06 5.273076694384479 0.13379286228513565 KLTVNGVCAST(ph)PPLTPIK ddPTM_KYSE-520_SHP099_60min_R1 1 KLTVNGVCASTPPLTPIK 18 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 KLTVNGVCAS(0.053)T(0.947)PPLTPIK 90.464 0.0024053 618840000.0 451750.0 571680.0 344910.0 369690.0 427030.0 747660.0 553080.0 629950.0 799850.0 747120.0 True False 426690.5269587019 544215.6346908252 367143.45047551254 404825.22644864826 460634.83153166354 742993.5766096046 608990.7239406283 627764.8504814358 654617.4025776638 740501.0980505636 0.5762186282802327 0.7349288692799002 0.49580405949707707 0.5466909198573607 0.6220582693858613 1.0033659349940232 0.8224035393652376 0.8477568124261852 0.8840194893714588 1.0 19.49814234924996 -6.190985237157519 6.709767113939374 0.8960133050631283 0.5927771060374749 0.7986880701722096 0.07926376267091896 0.11632771713736002 9.287810264167167 0.026482922652256557 0.026447120464600897 6.44191162940605e-07 6.190985237157519 -0.30323619902565335 KLVFDDFCDSSNVS(ph)NKDS(ph)SEDDISR ddPTM_KYSE-520_SHP099_60min_R1 1 KLVFDDFCDSSNVSNKDSSEDDISR 25 2 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 2 KLVFDDFCDS(0.001)S(0.011)NVS(0.926)NKDS(0.594)S(0.465)EDDIS(0.003)R 102.58 0.0011466 170970000.0 126000.0 113020.0 111790.0 111630.0 110570.0 114920.0 81491.0 98689.0 127760.0 95719.0 True False 119010.52882522714 107590.3495535214 118996.16227032409 122239.28163721654 119271.22994275819 114202.74165259046 89728.9055555179 98346.6708931858 104562.0045675093 94871.00412825507 1.2544457594687004 1.1340698935585334 1.2542943269521474 1.2884788430399936 1.257193713070821 1.203768661478496 0.945799049773041 1.0366357117948495 1.1021492344083665 1.0 16.533679596485953 -6.66346173535325 6.204577151965052 1.025001781190127 1.2347837435600078 0.795436705994272 0.05252828413284701 0.09875757410638943 5.2726817812169715 0.021261469975345306 0.016320023471443363 2.1703924232230199e-07 6.66346173535325 0.20978196236988067 KLVFDDFCDSSNVS(ph)NKDSSEDDISR ddPTM_KYSE-520_SHP099_60min_R1 1 KLVFDDFCDSSNVSNKDSSEDDISR 25 2 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 KLVFDDFCDS(0.003)S(0.013)NVS(0.472)NKDS(0.286)S(0.225)EDDIS(0.001)R 85.19 0.0036764000000000002 856320000.0 330290.0 249890.0 247230.0 215880.0 235400.0 258800.0 213780.0 250110.0 264410.0 182600.0 True False 311968.15528320865 237884.90930746286 263166.84138198604 236397.17029331124 253924.6407572153 257184.73320301448 235390.96869174 249242.42678611286 216399.80923368136 180982.30606065036 1.7237494762535661 1.314409759082987 1.4541025977080555 1.3061894029247831 1.4030357236807485 1.4210490450753088 1.3006297345601086 1.3771646091335985 1.1956959436750794 1.0 17.46548913193121 -11.819704734846496 0.07235097250621443 5.616641221290558e-13 1.913342767220788 0.6665650226152315 0.10184157026802647 112.58724249238043 0.9182605786242347 23.866959166397404 5.67845404017208 1.5145906279602794e-12 11.819704734846496 1.9133427672202263 KLVIIEGDLER ddPTM_KYSE-520_SHP099_60min_R1 4 KLVIIEGDLER 11 1 J3KN67;A0A2R2Y2Q3;P06753;P06753-7;A0A494C0P6;P06753-5;P06753-2;A0A087WWU8;P06753-6;P06753-4;P06753-3 J3KN67;P06753-5;P06753-4 TPM3 Tropomyosin alpha-3 chain 0 ;;; 132.47 0.00032333 1235830000.0 1968520.0 1769470.0 1300820.0 1097800.0 1739620.0 1686490.0 1160110.0 1381080.0 1494330.0 1432140.0 False True 1859322.271452668 1684462.0051713833 1384672.9385855903 1202134.5819343957 1876518.1969161727 1675963.9903382978 1277385.2403825186 1376289.355826494 1222997.3409937846 1419452.3537880594 1.3098870606616262 1.186698518394153 0.9754980044876785 0.8469002701825723 1.3220015394728484 1.180711691988598 0.8999141372893499 0.9695917951410082 0.8615980224556323 1.0 20.436902992808925 -6.765568333090492 24.999027783032368 0.9302419400134568 1.1270995329987792 0.34194806958469903 0.13833489111456554 141.91110898852034 859196.3982426205 0.060810700513144994 0.04266512355976006 1.7156617419367568e-07 6.765568333090492 0.19685759298532235 KLVPIKPAPLPLS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 2 KLVPIKPAPLPLSPGK 16 2 A0A1B0GVH1;Q9BRW5;Q02086-2;Q02086 A0A1B0GVH1 SP2 Transcription factor Sp2 1 KLVPIKPAPLPLS(1)PGK;KLVPIKPAPLPLS(1)PGK 173.09 1.8415999999999998e-08 2102290000.0 5866040.0 5198940.0 4877300.0 4580380.0 5178770.0 5485480.0 4952190.0 5564150.0 5868590.0 5139350.0 True False 5540639.06753917 4949175.118631958 5191698.561955916 5015697.938058533 5586309.735829407 5451243.084584514 5452805.693916865 5544849.262332375 4803001.991114892 5093819.357353792 1.0877180125243977 0.9716039716812856 1.0192152877311635 0.9846634884720682 1.0966839112118538 1.0701681198636777 1.0704748856169812 1.0885445425793212 0.9429077975018774 1.0 22.28031636739901 -3.92928514826044 12.884141288909683 1.0329943879278902 1.533616193320785 0.10535058389177288 0.050425783656511486 442249.43392425694 2309577.4817330586 0.01277523880411634 5682621.691229482 0.00011768330369627707 3.92928514826044 0.5006218053928948 KLVWVPSDK ddPTM_KYSE-520_SHP099_60min_R1 1 KLVWVPSDK 9 1 P35579;Q5BKV1;B1AH99 P35579 MYH9 Myosin-9 0 100.88 0.039868 0.0 5706100.0 5482500.0 3641200.0 3427400.0 5330300.0 5087200.0 3741100.0 4261300.0 4271200.0 4262800.0 False True 5389571.258171658 5219112.47059973 3875917.5781259905 3753139.0655146167 5749764.284741649 5055448.89779898 4119286.8976174984 4246518.544894897 3495657.748189931 4225034.908408213 1.2756276279388623 1.2352826861177428 0.9173693619459932 0.8883095990628432 1.3608797109105732 1.1965460658651992 0.974971091817427 1.005084842362824 0.8273677789580498 1.0 22.01053183071411 -6.8510457956758355 5.862557546710743 0.9481436719228747 1.1370961157724235 0.2968163702280552 0.14609107623190914 0.31859465462406195 16.649256065847 0.06736164698396696 0.04526268864929007 1.4091401989507925e-07 6.8510457956758355 0.1889524438495488 KLWGDR ddPTM_KYSE-520_SHP099_60min_R1 2 KLWGDR 6 1 P13639 P13639 EEF2 Elongation factor 2 0 ; 110.36 0.021996 5326700000.0 3677700.0 3339140.0 2463060.0 2195570.0 3827300.0 3925500.0 2959010.0 3327290.0 3244820.0 3224450.0 False True 3473690.6496868106 3178722.7022486734 2621832.788635337 2404236.3126778114 4128486.735641839 3900999.4984097057 3258135.607954658 3315748.407585324 2655642.4832556774 3195883.881584142 1.086926427365992 0.9946302243850731 0.8203779879936507 0.7522915105057181 1.291813748125111 1.2206324268815583 1.0194787197148287 1.0375059077371007 0.8309571253694372 1.0 21.607783560034978 -4.258283089204806 21.84013466535499 1.0014113481240985 1.0869266043702215 0.02696581939709919 0.16061042087939945 293.9318865727092 2033205.475929348 0.04351855828510781 0.29222346448693676 5.5171769204938166e-05 4.258283089204806 0.085515256246123 KLYDIDVAK ddPTM_KYSE-520_SHP099_60min_R1 2 KLYDIDVAK 9 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 RPL23A 60S ribosomal protein L23a 0 ; 125.74 0.0016123 2540000000.0 5799100.0 5197400.0 3873000.0 3332000.0 5398200.0 5060000.0 3731200.0 4494900.0 4325400.0 4256700.0 False True 5477412.362780751 4947709.102543549 4122659.777019102 3648672.2781976727 5823007.628443489 5028418.6630883 4108386.109002809 4479308.241017546 3540016.394460739 4218988.949662491 1.2982760628512504 1.172723882801199 0.9771677115553729 0.8648214825235695 1.3801903010220768 1.1918539543675652 0.973784515205111 1.0617018187203073 0.8390674724909939 1.0 22.00846587819265 -6.77337389405757 24.36603349064825 0.9737801837484907 1.1386365204518116 0.26129838701886055 0.14677844809943297 278.7457603202079 569092.5446593666 0.06515717119916598 0.0443440977174902 1.6851016581425352e-07 6.77337389405757 0.1648563367033209 KLYEGK ddPTM_KYSE-520_SHP099_60min_R1 1 KLYEGK 6 1 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 0 105.12 0.025689999999999998 689230000.0 988220.0 887690.0 552650.0 539760.0 808110.0 810710.0 646530.0 692570.0 738020.0 713380.0 False True 933401.4666322707 845044.0399501446 588274.7032712646 591058.6281152387 871703.6594830641 805650.0581723946 711887.5619247385 690167.6363170536 604014.1719702032 707060.0082012409 1.3201163349725322 1.1951517977942703 0.832001098135693 0.8359384228488478 1.2328566873703921 1.1394366090962584 1.0068276435769277 0.9761089982628752 0.854261540695554 1.0 19.43147313623314 -4.570421778726727 6.586784117114813 0.9939704381201901 1.2908574862814162 0.454392534615795 0.12266950820140296 0.1640236741976545 16.657484345142198 0.034234227363954435 0.0940600823908717 2.6889221042724844e-05 4.570421778726727 0.296887048161226 KLYGDADYLEER ddPTM_KYSE-520_SHP099_60min_R1 4 KLYGDADYLEER 12 1 B4E1E0;P17812-2;P17812;A0A3B3IRI2 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 0 ;;; 159.52 9.5817e-06 3357330000.0 4935750.0 4937360.0 3148380.0 3007370.0 4604290.0 4571140.0 3676260.0 3322620.0 3934130.0 3775410.0 False True 4661954.108326311 4700161.814471546 3351329.61238611 3293189.540601236 4966621.428173482 4542609.81968171 4047892.237640081 3311094.60672534 3219791.1633467064 3741962.8046245365 1.2458579498879025 1.2560685554284 0.8956074090967288 0.8800700895613712 1.327277070214445 1.2139644504396694 1.0817564067278966 0.8848550291930468 0.8604551491980359 1.0 21.835363787483196 -7.179142672186505 4.407682580670538 0.9043541334727642 1.1289611831245365 0.3214583575285055 0.14312269728171145 0.29252949372915044 10.308153374023654 0.07861054021713684 0.04321599724120676 6.619989914764463e-08 7.179142672186505 0.22460704965177236 KMANS(ph)SPVLSK ddPTM_KYSE-520_SHP099_60min_R1 1 KMANSSPVLSK 11 1 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 KMANS(0.594)S(0.406)PVLSK 72.175 0.013952 456410000.0 585890.0 600830.0 569060.0 459020.0 545180.0 531440.0 473290.0 476020.0 620820.0 510380.0 True False 553389.5137572407 571965.2249357844 605742.5181281931 502645.1227906052 588082.5643501211 528123.0858323419 521134.7720652709 474368.79772390315 508094.7375986312 505858.4302696321 1.0939612362737015 1.1306824018548354 1.1974546273852171 0.9936478127342582 1.1625437655287507 1.0440136097975916 1.030198847901964 0.9377501082092388 1.0044208165668151 1.0 18.94837416266689 -6.667679362707682 1.8085281534595026 0.9795796310538223 1.1151557236137541 0.5344804140770931 0.05404145482272418 0.26579133395130455 1.7777520975468422 0.026456546077250547 0.017826483391303972 2.1494167913904395e-07 6.667679362707682 0.13557609255993186 KMEDSVGCLETAEEVKR ddPTM_KYSE-520_SHP099_60min_R1 4 KMEDSVGCLETAEEVKR 17 2 P35579 P35579 MYH9 Myosin-9 0 ;;; 245.74 1.2412000000000001e-23 5677190000.0 4662280.0 4358700.0 2792370.0 3321170.0 4636360.0 4221860.0 3150710.0 3764140.0 3607260.0 3488050.0 False True 4403654.034375245 4149301.509457919 2972370.638149969 3636812.998253826 5001215.154720138 4195509.805720546 3469214.5147663574 3751083.076896876 2952272.5156245534 3457148.590661832 1.273782112307824 1.2002091899276977 0.8597752049705627 1.0519689573301214 1.4466300835980879 1.2135752038697774 1.0034901375477805 1.0850222310458382 0.853961708096375 1.0 21.721151182297923 -6.7751351951138234 21.127315976883118 0.9927030777685458 1.1680183802057353 0.27132141218208516 0.1511109034663516 61.79278520615348 95316.72194488533 0.06858955127685899 0.0466812218721266 1.6782814906985115e-07 6.7751351951138234 0.1753153024371895 KMEES(ph)DEEAVQAK ddPTM_KYSE-520_SHP099_60min_R1 10 KMEESDEEAVQAK 13 1 I3VM54;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK;KMEES(1)DEEAVQAK 216.71 2.8619e-11 9360670000.0 8435610.0 7905450.0 7320990.0 7587440.0 7937620.0 7565420.0 7541360.0 7882090.0 9379870.0 7890660.0 True False 7967669.897328366 7525660.31567764 7792912.729398152 8308548.016352976 8562265.535120154 7518201.407529943 8303714.265380958 7854748.869483635 7676722.055280553 7820754.891240584 1.0187852717711854 0.9622677631933644 0.9964399649100861 1.0623716165377757 1.0948131803376269 0.9613140306890953 1.0617535494791301 1.004346636445687 0.98158325660847 1.0 22.898876438402375 -5.022275845308964 23.921089846827385 1.0261379194782592 0.9877333499105306 0.11039743212859476 0.04031831929440619 813.8992480268314 874014.7059531077 0.011012163934099855 0.019292269745411636 9.500012017937849e-06 5.022275845308964 -0.03840456956772853 KMEIYRPHK ddPTM_KYSE-520_SHP099_60min_R1 1 KMEIYRPHK 9 2 Q92769-3;Q92769;E5RK19;E5RFI6;E5RJ04;E5RGV4;E5RHE7;E5RH52;E5RG37;E5RFP9;H3BM24;Q13547;Q5TEE2 Q92769-3;Q13547 HDAC2;HDAC1 Histone deacetylase 2;Histone deacetylase 1 0 114.4 0.0012267 473010000.0 1297700.0 1514200.0 1218000.0 1211300.0 901480.0 1420600.0 1019100.0 1365400.0 1197200.0 701940.0 False True 1225713.9940991865 1441455.5591394634 1296514.228868903 1326421.5878093755 972421.3472804338 1411733.508455185 1122120.5734575375 1360663.7460867574 979818.6589560265 695721.3577010562 1.7617886536492708 2.0718863136566825 1.8635538704074122 1.9065414236992912 1.3977166814221513 2.0291651144937126 1.6128879199072976 1.955759631388835 1.4083492595278984 1.0 19.408150084600617 -11.123553249091106 0.2254580518810141 5.360523043721334e-10 1.938608888874103 0.5936198851242618 0.20748045060482873 23.00262365488541 0.7319847027598048 12.17713783481184 0.39974686704836015 7.523964727624102e-12 11.123553249091106 1.9386088883380508 KMEVEELS(ph)PLALGR ddPTM_KYSE-520_SHP099_60min_R1 5 KMEVEELSPLALGR 14 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 KMEVEELS(1)PLALGR;KMEVEELS(1)PLALGR;KMEVEELS(1)PLALGR;KMEVEELS(1)PLALGR;KMEVEELS(1)PLALGR 230.67 4.9426e-15 2685414000.0 1657912.0 1780731.0 1629744.0 1520314.0 1768686.0 2266158.0 2210004.0 2580334.0 3518191.0 2546879.0 True False 1565944.3163943673 1695182.0098282774 1734799.905922597 1664804.185460928 1907871.5257532543 2252014.0673333723 2433412.7718805326 2571383.4236084833 2879376.2007777845 2524315.6335018757 0.6203441026200037 0.6715412238193936 0.6872357334791699 0.659507140615144 0.7557975319855487 0.8921285585072612 0.963989106427536 1.018645762630449 1.1406561693647432 1.0 21.26746088155353 -6.451529373111862 1.0669035925787453 1.0656948143673926 0.6512229421837186 0.9507319439084805 0.038803814346739976 0.09836225020091549 0.23126059838068858 0.02292344007258768 0.01731518042324954 3.53566107169958e-07 6.451529373111862 -0.414471872183674 KMLGEDS(ph)DEEEEMDTSER ddPTM_KYSE-520_SHP099_60min_R1 9 KMLGEDSDEEEEMDTSER 18 1 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER;KMLGEDS(1)DEEEEMDTSER 274.48 1.9358e-30 8036210000.0 4924440.0 4705380.0 3896990.0 4225640.0 4341290.0 4111640.0 3860140.0 4205730.0 5417660.0 4123610.0 True False 4651271.4965722365 4479326.481880624 4148196.2108044554 4627243.555115008 4682924.824438783 4085977.7296245773 4250360.622535944 4191141.3042547656 4433949.512094645 4087078.0235200296 1.1380432352417609 1.0959728334285057 1.014954005510222 1.132164232854492 1.1457879681987513 0.9997307871567118 1.0399509375833462 1.0254615351446388 1.0848702879119174 1.0 21.962638354417752 -6.267523087001308 24.99641100538859 1.0322158199250493 1.1013254389724925 0.4572441819081168 0.0409095393730834 521.3788900633119 2142207.7431085175 0.014780068506568548 0.013362903063845402 5.401034022206963e-07 6.267523087001308 0.06910961904744317 KMNDS(ph)LEDMFDR ddPTM_KYSE-520_SHP099_60min_R1 4 KMNDSLEDMFDR 12 1 I6L8A6;Q99708-3;Q99708;Q99708-2;J3QSH7 I6L8A6 RBBP8 DNA endonuclease RBBP8 1 KMNDS(1)LEDMFDR;KMNDS(1)LEDMFDR;KMNDS(1)LEDMFDR;KMNDS(1)LEDMFDR 152.37 9.6707e-06 1859610000.0 1685130.0 1643290.0 1425420.0 1570120.0 1637580.0 1616650.0 1454690.0 1439380.0 1922730.0 1550320.0 True False 1591652.4796766269 1564343.881771421 1517304.8539526397 1719343.732726208 1766448.2294443494 1606559.8876841296 1601744.2616062677 1434387.1267338186 1573610.7000789528 1536585.3709307068 1.0358373246209978 1.0180650625509347 0.9874523620081135 1.1189379810929767 1.149593288379685 1.0455389710700156 1.0424049922043017 0.9334900317741623 1.0240958490486083 1.0 20.55129649297283 -7.074682576489649 6.651505808497357 0.9840681199114962 1.0596342109801002 0.3127433831227594 0.0487191155397236 0.3274283820825521 24.248758487156007 0.025326169846953465 0.01460221163374403 8.420103376412961e-08 7.074682576489649 0.07556609106860401 KMPLDLS(ph)PLATPIIR ddPTM_KYSE-520_SHP099_60min_R1 6 KMPLDLSPLATPIIR 15 1 C9JCI8;E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336-3;P15336-7;P15336-4;P15336-5;P15336 C9JCI8 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 KMPLDLS(0.856)PLAT(0.144)PIIR;KMPLDLS(0.984)PLAT(0.016)PIIR;KMPLDLS(1)PLATPIIR;KMPLDLS(1)PLATPIIR;KMPLDLS(1)PLATPIIR;KMPLDLS(1)PLATPIIR 209.43 3.3287999999999997e-14 5746210000.0 5556370.0 6122810.0 6192730.0 4581320.0 5066530.0 5545130.0 4214080.0 5083450.0 7743720.0 4907060.0 True False 5248147.079751015 5828661.017074821 6591923.284518339 5016727.275375916 5465237.08638765 5510520.78680847 4640080.331857465 5065816.698436147 6337655.65129549 4863587.266034905 1.0790691711037452 1.1984283818200518 1.3553623948630162 1.0314870487490728 1.1237049501618683 1.1330157115287016 0.954044839343521 1.041580303043706 1.303082540649535 1.0 22.213589373247643 -5.294563989712342 24.99679763229104 1.0838788313379868 1.2097009563213292 0.22200020451802926 0.10903505101680616 954.0300874447846 719936.9423783008 0.030928094774088824 0.045876790700410376 5.074999575840163e-06 5.294563989712342 0.12582212498334244 KMPS(ph)LPS(ph)LQAT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 KMPSLPSLQATK 12 1 Q9NVE4 Q9NVE4 CCDC87 Coiled-coil domain-containing protein 87 3 KMPS(1)LPS(1)LQAT(1)K 42.041000000000004 0.062462000000000004 502810000.0 502010.0 466230.0 399000.0 430010.0 426710.0 477580.0 465800.0 524990.0 633280.0 587200.0 True False 474162.50456787593 443831.6109745031 424720.1784225724 470878.0211127797 460289.6493522147 474599.2460706937 512887.6097699159 523168.9322235869 518292.3156896695 581997.8648346869 0.8147151960816198 0.7626000674428091 0.7297624339965778 0.8090717330149139 0.7908785876438865 0.815465613787949 0.8812534216351442 0.8989189889419783 0.8905398919923657 1.0 19.1506543347902 -7.371080935640704 0.4999795708178493 0.9964029787044634 0.7621914068635909 0.875604412827786 0.026411552113974713 0.28601181135837445 0.17154266527160808 0.02829571212531851 0.01828164847454752 4.255191054930117e-08 7.371080935640704 -0.2342115718408725 KMS(ph)DDEDDDEEEYGKEEHEK ddPTM_KYSE-520_SHP099_60min_R1 11 KMSDDEDDDEEEYGKEEHEK 20 2 Q7KZ85;Q7KZ85-3 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK;KMS(1)DDEDDDEEEYGKEEHEK 247.08 1.085e-26 27649070000.0 11016915.0 9555874.0 8658445.0 9826191.0 9467783.0 9609253.0 9317621.0 10178755.0 11518049.0 8268362.0 True False 10405784.763274416 9096795.469380694 9216582.218701825 10760069.238287957 10212843.657783628 9549278.087655587 10259537.061897755 10143447.274644272 9426661.647986803 8195110.745368296 1.2697552341382996 1.1100271554624213 1.1246440109318647 1.312986434548102 1.2462117932397327 1.1652408837858155 1.2519095080803184 1.2377437706228844 1.1502787382482358 1.0 22.966332014770213 -9.650901837186852 6.301023801937792 0.9999999993485021 1.2075045924665035 0.4873746106701192 0.06388642999423279 5.867514698091463e-10 1.4978202391747612e-10 0.06333601228580056 0.015361239212595355 2.2340771302666884e-10 9.650901837186852 0.2075045931180014 KMS(ph)GGSTMSSGGGNTNNSNSK ddPTM_KYSE-520_SHP099_60min_R1 6 KMSGGSTMSSGGGNTNNSNSK 21 1 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 A0A6E1WJ75 LDB1 LIM domain-binding protein 1 1 KMS(0.889)GGS(0.085)T(0.026)MSSGGGNTNNSNSK;KMS(0.795)GGS(0.096)T(0.096)MS(0.011)S(0.002)GGGNTNNSNSK;KMS(0.998)GGS(0.001)T(0.001)MSSGGGNTNNSNSK;KMS(0.888)GGS(0.056)T(0.041)MS(0.012)S(0.002)GGGNTNNSNSK;KMS(0.874)GGS(0.099)T(0.026)MS(0.001)SGGGNTNNSNSK;KMS(0.709)GGS(0.065)T(0.071)MS(0.133)S(0.021)GGGNTNNSNSK 182.87 4.9283e-11 1748290000.0 1039060.0 939473.0 938676.0 832517.0 881725.0 880965.0 933832.0 965942.0 1246070.0 948917.0 True False 981421.2704852421 894339.3069022774 999184.5568947018 911639.165374638 951111.7411710084 875466.5706576251 1028232.8518820512 962591.3726545575 1019815.0988684732 940510.3336262556 1.0434986574801888 0.9509085386165189 1.0623855168525584 0.9693026570582153 1.0112719734868598 0.9308420538902044 1.0932711902458003 1.0234777208062835 1.0843209929830842 1.0 19.84308426952973 -6.776716157811165 24.999506585492366 1.0522239358751138 0.9953862073669735 0.26839641142000403 0.0448881201504786 313.4267940872205 512899.0786783391 0.017422171383312743 0.011794298712727441 1.672183147313239e-07 6.776716157811165 -0.056837728508140284 KMS(ph)IQDSLALQPK ddPTM_KYSE-520_SHP099_60min_R1 4 KMSIQDSLALQPK 13 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KMS(0.998)IQDS(0.002)LALQPK;KMS(1)IQDSLALQPK;KMS(0.999)IQDS(0.001)LALQPK;KMS(0.967)IQDS(0.033)LALQPK 230.75 2.8121e-12 4166250000.0 8677660.0 7510560.0 5440890.0 4835370.0 4735730.0 5593070.0 5828890.0 5762530.0 7204360.0 6947570.0 True False 8196292.901313658 7149741.424019606 5791618.475131796 5294922.110992993 5108405.008382181 5558161.575486022 6418131.085684329 5742541.128414614 5896229.831136361 6886019.934927672 1.190280158751784 1.0382981013102024 0.8410690834273091 0.7689379585057227 0.7418516148161336 0.807166059350713 0.9320523533674235 0.833941984292982 0.8562609296596949 1.0 22.715238926819232 -4.572015020330741 2.6208701079728973 0.8355954177348712 1.1842241023044475 0.7049967568453894 0.07184323587941137 0.1576145675017437 1.994354454641304 0.019559383918888545 0.08871465231122724 2.6790756658050726e-05 4.572015020330741 0.3486286845695763 KMS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 2 KMSPLR 6 1 Q86SQ7-2;Q86SQ7-3;Q86SQ7-4;Q86SQ7 Q86SQ7-2 SDCCAG8 Serologically defined colon cancer antigen 8 1 KMS(1)PLR;KMS(1)PLR 84.213 0.011937 1799360000.0 3911000.0 3396200.0 3123700.0 3148200.0 3482700.0 3663200.0 3152900.0 3457600.0 4040000.0 3156300.0 True False 3694049.0336147873 3233041.454199872 3325058.700096714 3447403.9814591575 3756768.676147636 3640336.6100049536 3471625.9013386993 3445606.39260991 3306437.840112216 3128337.637564241 1.180834507521706 1.033469474451343 1.0628835775813643 1.1019922977825838 1.2008833800537906 1.163664869895361 1.1097350425517836 1.1014176830646383 1.0569312597238212 1.0 21.576964798642113 -7.9483037347459735 1.7416585958164572 1.0005902839704457 1.119878344791334 0.3940154463465827 0.04830817148195199 0.40528304084372235 2.766609736814063 0.050159787988348976 0.014469421447802853 1.1264093979500619e-08 7.9483037347459735 0.11928806082088839 KMS(ph)PTGNEMK ddPTM_KYSE-520_SHP099_60min_R1 4 KMSPTGNEMK 10 1 O95171-3;O95171-2;O95171;F2Z2X8 O95171-3 SCEL Sciellin 1 KMS(0.975)PT(0.025)GNEMK;KMS(0.5)PT(0.5)GNEMK;KMS(0.903)PT(0.097)GNEMK;KMS(0.707)PT(0.293)GNEMK 148.89 0.00017703 6431630000.0 3415560.0 2615360.0 2254670.0 2463440.0 2558770.0 2496590.0 2415070.0 2567690.0 3165040.0 2359060.0 True False 3226092.078049944 2489714.179864608 2400009.635799553 2697564.596939759 2760130.641590228 2481007.855746963 2659208.8444118304 2558783.2826933526 2590348.5201655403 2338160.5637209094 1.3797564325163345 1.0648174545816986 1.0264520208912504 1.1537122979471093 1.1804709584177582 1.0610938762044335 1.137308055602482 1.0943573860562201 1.1078574159352441 1.0 21.156942573843057 -4.25734509262649 24.983799037254112 1.0978625911246407 1.379756543747793 0.7211414211479914 0.0536021826123847 221.68026443325365 1352665.0541423096 0.013304751492535195 0.09960598509900312 5.529105890217685e-05 4.25734509262649 0.2818939526231523 KMS(ph)QPGS(ph)PSPK ddPTM_KYSE-520_SHP099_60min_R1 5 KMSQPGSPSPK 11 1 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 KMS(1)QPGS(0.999)PS(0.001)PK;KMS(1)QPGS(0.985)PS(0.015)PK;KMS(1)QPGS(0.997)PS(0.003)PK;KMS(1)QPGS(0.774)PS(0.227)PK;KMS(0.999)QPGS(0.957)PS(0.044)PK 112.67 0.00019676 8905100000.0 16310960.0 13513700.0 12093790.0 13632510.0 13281380.0 12141700.0 12791620.0 14154120.0 14806180.0 13019980.0 True False 15406158.533707377 12864481.567522746 12873375.054148156 14928139.651636425 14326549.045284875 12065919.146565076 14084721.783780688 14105022.66131645 12117750.945423951 12904633.106591169 1.1938470785224051 0.9968885950699431 0.9975777651185568 1.1568046552219862 1.1101864676778332 0.9350067566355132 1.0914468987566006 1.0930200451892096 0.9390232829815743 1.0 23.621385788764233 KMS(ph)QPGSPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KMSQPGSPSPK 11 1 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 KMS(0.99)QPGS(0.013)PS(0.997)PK;KMS(1)QPGS(0.044)PS(0.956)PK 184.31 1.2228e-06 2174280000.0 4658300.0 3898800.0 3488050.0 3890700.0 3889000.0 3585100.0 3854900.0 4208000.0 4356200.0 3728600.0 True False 4399894.812909174 3711495.79578189 3712895.2840773202 4260470.958218388 4195042.174616862 3562724.061074678 4244590.912198468 4193403.4301545876 3565223.8908655564 3695567.5048069027 1.190587049806596 1.0043101068927218 1.0046888006369465 1.1528597306575252 1.1351550659432637 0.9640533034346057 1.1485626785811487 1.1347116308118141 0.9647297434638102 1.0 21.81736449621341 -7.771651617136263 24.989178889727487 0.9823648058583864 1.0871471605734553 0.26472004940733096 0.07265839337741377 328.28378653573753 803277.2796250616 0.06711238556037531 0.018142289502184165 1.6917975155995472e-08 7.771651617136263 0.10478235471506891 KMSGGS(ph)TMSSGGGNTNNSNSK ddPTM_KYSE-520_SHP099_60min_R1 2 KMSGGSTMSSGGGNTNNSNSK 21 1 A0A6E1WJ75;Q86U70-3;Q86U70-2;Q86U70 A0A6E1WJ75 LDB1 LIM domain-binding protein 1 1 KMS(0.33)GGS(0.516)T(0.154)MSSGGGNTNNSNSK;KMS(0.248)GGS(0.319)T(0.319)MS(0.098)S(0.015)GGGNT(0.001)NNSNSK 124.17 4.2473999999999993e-05 1631040000.0 428920.0 360153.0 334352.0 332637.0 341253.0 359767.0 359159.0 392177.0 419010.0 330370.0 True False 405126.95256917865 342850.709279326 355904.8649021152 364250.7204690392 368107.6696360316 357521.5607042076 395466.29677405185 390816.6295217995 342928.34638253035 327443.1788239711 1.2372435242786637 1.0470540583886703 1.0869209924615493 1.1124089430638449 1.1241879307368965 1.091858324819178 1.2077402198280303 1.1935402988861683 1.0472911593827516 1.0 18.320885052106522 -7.958133044797719 6.29178512499966 1.000205238464638 1.1321696617661174 0.40398183461501835 0.056496901983487495 0.16510361074161684 15.622025177547254 0.055497271806920344 0.014394852587817043 1.1012019079974908e-08 7.958133044797719 0.1319644233014794 KMSQPGS(ph)PSPK ddPTM_KYSE-520_SHP099_60min_R1 2 KMSQPGSPSPK 11 1 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 KMSQPGS(0.958)PS(0.042)PK;KMS(0.001)QPGS(0.793)PS(0.206)PK 81.632 0.0054088999999999995 1097500000.0 1646040.0 1502450.0 1372110.0 1330940.0 1441430.0 1398730.0 1335070.0 1435500.0 1626700.0 1504030.0 True False 1554730.8799006098 1430270.0467765736 1460558.4060536239 1457432.1374382963 1554862.3403851837 1390000.0072374518 1470031.9046275697 1430520.58554822 1331332.2857699392 1490705.4643176342 1.0429497423304093 0.959458512102037 0.9797766500588967 0.9776794761434857 1.043037929090115 0.932444430177037 0.9861316938959985 0.9596265793545181 0.8930887540412635 1.0 20.507563805386706 -6.286316374638437 24.99239185853301 0.9537270411480807 0.995867875062108 0.27692587226790955 0.03703121651891864 1162.6355426182276 1168024.5946718922 0.012807704005667227 0.011299252373459237 5.172299032799149e-07 6.286316374638437 0.04214083391402734 KMT(ph)GT(ph)LET(ph)QFTCPFCNHEKSCDVK ddPTM_KYSE-520_SHP099_60min_R1 1 KMTGTLETQFTCPFCNHEKSCDVK 24 2 K7EN05;K7EPC8;A0A024R7E8;K7EQ44;K7EMV4;P60002 K7EN05 ELOF1 Transcription elongation factor 1 homolog 3 KMT(0.768)GT(0.768)LET(0.768)QFT(0.349)CPFCNHEKS(0.349)CDVK 43.799 0.054533000000000005 21798000.0 1972.9 3206.0 2177.4 3208.8 2919.2 1190.3 1339.2 1889.8 3370.1 1685.0 True False 1863.4593041213545 3051.97894769589 2317.758687963178 3513.7633872390998 3148.924432024053 1182.8708961806333 1474.579405332484 1883.2447248826345 2758.1747933074726 1670.0722109101628 1.115795647606039 1.8274532848089304 1.3878194444658394 2.1039589571544064 1.8855019630007133 0.7082752999859734 0.8829435013045703 1.1276426926811123 1.6515302603618027 1.0 10.705694768241484 -6.2522245895527595 24.99090000552241 1.0701100847027025 1.682267762750232 0.4281720517036175 0.3405917931820668 659.6005682345966 1788865.5859594292 0.11634953029839727 0.11477669948901262 5.594682052118997e-07 6.2522245895527595 0.6121576780475295 KMVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KMVTPK 6 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 KMVT(1)PK;KMVT(1)PK 74.464 0.040228 23764000000.0 21538700.0 19665700.0 15675000.0 13095000.0 15153200.0 16971900.0 15170900.0 14672100.0 18307900.0 16506300.0 True False 20343905.37466606 18720930.253182497 16685435.580886774 14339544.86284467 16345670.630085962 16865972.076693352 16704522.62571579 14621205.909593895 14983646.864601595 16360067.02370706 1.2435099040356068 1.1443064521712751 1.0198879721402259 0.8764967064050233 0.9991200284448568 1.030923165061194 1.0210546571422712 0.8937130812732359 0.9158670831170239 1.0 23.963675322917343 -4.6788495283546965 2.335863694823186 0.9638289337903411 1.2350421888083558 0.7689866667013746 0.0511934339322779 0.1562642357960939 1.6045017068815806 0.015105862962606563 0.06036886750927821 2.0948381365902288e-05 4.6788495283546965 0.27121325501801474 KMYES(ph)KEK ddPTM_KYSE-520_SHP099_60min_R1 1 KMYESKEK 8 2 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 KMY(0.441)ES(0.559)KEK 41.028999999999996 0.057987000000000004 451830000.0 591300.0 519190.0 331350.0 216030.0 459530.0 438100.0 362270.0 421590.0 423420.0 379180.0 True False 558499.4102726735 494247.3330799223 352709.3511787453 236561.42624821237 495692.39663195825 435365.6553950562 398891.7870144857 420127.602689846 346537.60154958355 375820.76019757596 1.4860791883318525 1.315114505170197 0.9385041714920682 0.6294527905372966 1.318959592257127 1.1584396113886215 1.0613883778128193 1.1178935470966989 0.9220821153344544 1.0 18.51968523732795 -4.600841166877648 4.272692226737874 1.0269440488218873 1.4522070952707367 0.45595993909058485 0.17098427815983633 0.1872284419811767 6.312759764077673 0.04667786031607389 0.14176129900792508 2.5070259719231638e-05 4.600841166877648 0.4252630464488494 KNASCGTRS(ph)AGR ddPTM_KYSE-520_SHP099_60min_R1 3 KNASCGTRSAGR 12 2 P60468 P60468 SEC61B Protein transport protein Sec61 subunit beta 1 KNAS(0.019)CGT(0.019)RS(0.962)AGR;KNAS(0.008)CGT(0.008)RS(0.985)AGR;KNAS(0.004)CGT(0.004)RS(0.991)AGR 54.09 0.040671 3854550000.0 1130690.0 898280.0 870920.0 596260.0 895860.0 857850.0 903630.0 1030200.0 1118810.0 848090.0 True False 1067968.3717253667 855125.2804542322 927060.8967212698 652928.3711278943 966359.0852538613 852495.8399466994 994977.7389789377 1026626.4766504882 915662.3069049389 840576.582404036 1.2705188249130064 1.0173079982892068 1.1028868946954127 0.7767625042093479 1.1496383619087855 1.0141798591492694 1.1836848180249286 1.2213360425939448 1.0893264529046942 1.0 19.681019739491816 -6.758299358880871 24.999425758780703 1.1420315011417537 1.047294501314238 0.05296056227577739 0.13021221288833534 195.01232047420285 1552616.0993440931 0.050611087196229414 0.03751596642488508 1.7446191735926302e-07 6.758299358880871 -0.0947369998275156 KNDDGWYEGVCNR ddPTM_KYSE-520_SHP099_60min_R1 1 KNDDGWYEGVCNR 13 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 0 128.22 0.00012635 803660000.0 426110.0 487120.0 317850.0 287260.0 363840.0 488560.0 368130.0 320090.0 422140.0 450780.0 False True 402472.82887077477 463718.02401797334 338339.1195779814 314561.10403213213 392472.1380335822 485510.7158178692 405344.17300257453 318979.6824995674 345490.0172834091 446786.439901533 0.9008170188859704 1.037896369729063 0.7572725789362537 0.7040524866901915 0.8784334146758771 1.08667289885716 0.9072436779681766 0.7139421746323974 0.7732777596373592 1.0 18.76922587470817 -7.2027131296347635 24.99321680424676 0.8077066856489624 0.8954420825711245 0.04790189742728845 0.12648896066540546 684.7316209690398 291413.76718227187 0.06345339851675771 0.03663482466878617 6.270279070731093e-08 7.2027131296347635 0.08773539692216203 KNDMDEPPPLDYGS(ph)GEDDGK ddPTM_KYSE-520_SHP099_60min_R1 5 KNDMDEPPPLDYGSGEDDGK 20 1 Q12873-3;Q12873-2;Q12873;A0A5F9ZHX5;H7C2H0 Q12873-3 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KNDMDEPPPLDYGS(1)GEDDGK;KNDMDEPPPLDYGS(1)GEDDGK;KNDMDEPPPLDYGS(1)GEDDGK;KNDMDEPPPLDYGS(1)GEDDGK;KNDMDEPPPLDY(0.003)GS(0.997)GEDDGK 167.27 4.3233e-09 2038410000.0 1993680.0 1741770.0 1464570.0 1539010.0 1617760.0 1647860.0 1685730.0 1638680.0 1812130.0 1747670.0 True False 1883086.5960974505 1658092.7547499286 1558978.525594855 1685277.0476797693 1745068.5082047263 1637575.0944973687 1856140.0395393749 1632995.8015507872 1483092.872079839 1732187.003466687 1.0871150703294523 0.9572250290710698 0.9000059014845488 0.972918653879151 1.0074365554713545 0.9453800838015941 1.0715586918875482 0.9427364356634792 0.8561967438340508 1.0 20.72416325828636 -7.51255123878603 24.95053293655641 0.9185544394060556 0.9865064762310924 0.153866301361262 0.062073875341344655 842.4531507560921 2035333.9766713793 0.036983026047609786 0.015822190779523532 3.0721948812176594e-08 7.51255123878603 0.06795203682503681 KNDMDEPPPLDYGS(ph)GEDDGKSDK ddPTM_KYSE-520_SHP099_60min_R1 2 KNDMDEPPPLDYGSGEDDGKSDK 23 2 Q12873-3;Q12873-2;Q12873;A0A5F9ZHX5;H7C2H0 Q12873-3 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KNDMDEPPPLDYGS(1)GEDDGKSDK;KNDMDEPPPLDYGS(1)GEDDGKSDK 171.05 9.223e-11 1190900000.0 1595600.0 1441190.0 1292140.0 1181590.0 1268760.0 1335560.0 1230180.0 1276630.0 1617860.0 1346460.0 True False 1507088.8872502584 1371953.0691297061 1375433.4118970998 1293887.9583420123 1368604.1937430927 1327224.274639172 1354538.5997998174 1272201.668497682 1324097.4069316734 1334531.4119300286 1.1293019210920434 1.0280410463666476 1.0306489600779931 0.9695447756233502 1.025531644672033 0.9945245670311433 1.014991919778684 0.9532946599269598 0.9921815216149426 1.0 20.347901833067322 -1.000000037729531 0.8163877142818563 0.992082606772277 39.43058064073447 0.7833720479104761 0.021132508135195325 240.92427826249522 0.7757722069138638 0.007310963113822177 17153.336457770227 0.0999999913124548 1.000000037729531 38.43849803396219 KNFEWVAER ddPTM_KYSE-520_SHP099_60min_R1 2 KNFEWVAER 9 1 E9PBS1;P22234;P22234-2;D6RF62 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 0 ; 161.67 0.0003315 2225700000.0 3153800.0 2772300.0 1753320.0 1315040.0 2305500.0 2269600.0 1621520.0 1788370.0 1530490.0 1864830.0 False True 2978852.4270555684 2639114.5466928617 1866341.8126111873 1440021.0062188054 2486929.7334994 2255434.584534625 1785439.0661101604 1782166.5618786965 1252591.5965132054 1848309.057015787 1.6116635990872197 1.427853494887852 1.0097563529902922 0.7791018502846117 1.3455161754791738 1.2202691838648283 0.9659851307512748 0.9642145912308184 0.6776959685170804 1.0 20.817774580268846 -4.66961743280277 3.510358116205555 1.0041646587549613 1.5756073028625477 0.5814101870778972 0.18068013943317748 0.1719996595252676 4.016434903670464 0.05058317163405124 0.15682210806790342 2.1398462362089266e-05 4.66961743280277 0.5714426441075864 KNGFVVLK ddPTM_KYSE-520_SHP099_60min_R1 1 KNGFVVLK 8 1 I3L397;I3L504;P63241;P63241-2;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like 0 144.38 0.036575 0.0 3096900.0 2831100.0 2250300.0 1969700.0 2836700.0 2977400.0 2290800.0 2724000.0 2519200.0 2262800.0 False True 2925108.783482908 2695089.7064322648 2395357.9386073044 2156899.6957881036 3059932.1513848403 2958816.9421895444 2522376.420053503 2714551.0797863775 2061776.7838640336 2242753.3524317625 1.3042489849859256 1.201687962481494 1.0680434101280358 0.9617195281190551 1.3643640965097792 1.3192787958521484 1.1246784749283965 1.2103654094834175 0.9193060760018482 1.0 21.096839537590764 -7.75840334712283 24.991304289293883 0.9596529780332835 1.190097758729533 0.3940977931433056 0.11628476107251486 80.90801341728917 666046.1143742668 0.09257798153229886 0.03157584892500689 1.74420148888722e-08 7.75840334712283 0.2304447806962494 KNGSTAVAESVAS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 7 KNGSTAVAESVASPQK 16 1 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 KNGSTAVAESVAS(1)PQK;KNGSTAVAESVAS(1)PQK;KNGSTAVAESVAS(1)PQK;KNGSTAVAESVAS(1)PQK;KNGSTAVAESVAS(1)PQK;KNGSTAVAESVAS(1)PQK;KNGSTAVAESVAS(1)PQK 223.11 4.0904e-18 52019260000.0 19548200.0 17485790.0 15453140.0 14034290.0 14380010.0 16935000.0 14810650.0 17263510.0 19934800.0 16274920.0 True False 18463822.377629414 16645746.401694098 16449274.1302982 15368104.702036865 15511634.975935262 16829302.383280724 16307855.04001461 17203626.91314351 16315142.835413126 16130736.870496152 1.144636015444563 1.0319272166753846 1.0197472231032834 0.9527218021977548 0.9616197387923886 1.043306484904746 1.0109801660606352 1.0665121532426534 1.01143196162689 1.0 23.943309008168754 -4.226634532871064 2.4312154313772636 1.0085229456904163 1.1831148515711873 0.6219847144614867 0.031762662969965806 0.45286473528576743 3.053110118997477 0.009136864927024152 0.17125841598528166 5.934244926031725e-05 4.226634532871064 0.174591905880771 KNHEEEVK ddPTM_KYSE-520_SHP099_60min_R1 4 KNHEEEVK 8 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;; 147.51 0.00094989 2980400000.0 4455500.0 6503400.0 1973980.0 1059360.0 7683600.0 12083600.0 1925200.0 2361360.0 2084170.0 9213500.0 False True 4208344.533180953 6190966.902197592 2101225.909279674 1160041.2558918016 8288255.606296245 12008181.770216169 2119818.0041413507 2353168.993305568 1705737.2656501713 9131875.557994522 0.46084120468513695 0.6779512995857346 0.2300979569788542 0.12703209198643106 0.9076181068893643 1.314974311022403 0.23213391276292097 0.2576873697370395 0.18678936816620104 1.0 23.122479769109365 -5.757932396686519 24.999982507848802 0.6251202222245557 0.38541555780552395 0.11600963741714365 0.3687776688551004 270.5176909270217 1928403.8726688097 0.12182326404067252 0.15099355452788382 1.7460939329075415e-06 5.757932396686519 -0.2397046644190317 KNHTHQQDIDDLKR ddPTM_KYSE-520_SHP099_60min_R1 2 KNHTHQQDIDDLKR 14 2 Q6V3B1;G3V563;G3V2R5;P61244-2;G3V570;G3V5L1;P61244-3;P61244-4;P61244 Q6V3B1 MAX Protein max 0 ; 183.6 6.312399999999999e-11 142878000.0 348430.0 363160.0 375100.0 355580.0 330130.0 330030.0 323610.0 350210.0 448370.0 194614.0 False True 329101.8933220156 345713.24848572694 399279.5461812197 389374.21629097505 356109.3528172452 327970.160351587 356323.6569292451 348995.20324962883 366957.31048790005 192889.87136740092 1.7061647197388041 1.792283057865908 2.0699871037847526 2.0186348486350885 1.8461796375972332 1.7002974703990348 1.8472906555603887 1.8092977136414343 1.9024187630305878 1.0 17.557417864004925 -11.114353191226263 0.5607254447866719 2.876447695261194e-12 1.8647580442871066 0.8357323214917682 0.11355564174868531 53.85736009655407 4.373384111321834 68.5089072792093 0.053588441341568864 7.685051970369374e-12 11.114353191226263 1.8647580442842302 KNIIEATHMYDNAAEACSTTEEVFNS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 KNIIEATHMYDNAAEACSTTEEVFNSPR 28 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 KNIIEATHMYDNAAEACSTTEEVFNS(1)PR 144.86 9.6073e-07 865260000.0 249640.0 294180.0 246070.0 278580.0 240030.0 217750.0 223780.0 315050.0 316760.0 236090.0 True False 235791.971554998 280047.1512268177 261932.06592592085 305056.1594418686 258918.9954161187 216390.94147973842 246401.86628233496 313957.1650832228 259244.36886978906 233998.42627524055 1.0076647749658272 1.1967907463506287 1.119375331258952 1.3036675686145274 1.1064988749606604 0.9247538324262432 1.0530065103621888 1.3417063100840294 1.1078893691569232 1.0 17.836139301627796 -3.1469697826501566 13.586160282613282 1.1258294085315554 1.128691516806894 0.0 0.1263061405498562 0.0 0.0 0.029584738927123447 0.0 0.0007129026307539438 3.1469697826501566 0.002862108275338615 KNILLT(ph)IGSY(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 KNILLTIGSYK 11 1 F8VPD4;P27708 F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 2 KNILLT(0.643)IGS(0.643)Y(0.714)K 41.54 0.06155700000000001 0.0 159370.0 137440.0 142270.0 106230.0 122060.0 128620.0 98122.0 112410.0 147180.0 133780.0 True False 150529.42840378123 130837.176098354 151440.95184004836 116326.06726078584 131665.4275736009 127817.23487083342 108041.12933843634 112020.0759466913 120455.82210587029 132594.81327926496 1.1352587984474418 0.9867442991362784 1.142133301406674 0.8773048084149819 0.9929907838573849 0.9639685875316312 0.8148216862064219 0.8448299988232563 0.9084504825401571 1.0 17.016664816986598 -5.375511210024187 0.8651660234902343 0.8899038577833207 1.103658429126494 0.4675564649152144 0.07677407569874728 0.6359658614108684 0.9075439865295482 0.034061743231335366 0.09461812535015059 4.212004145740826e-06 5.375511210024187 0.21375457134317322 KNKEEAAEYAK ddPTM_KYSE-520_SHP099_60min_R1 2 KNKEEAAEYAK 11 2 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 0 ; 143.42 5.4903e-05 1786020000.0 2374100.0 1757840.0 1571460.0 1245950.0 2080250.0 2069670.0 1493430.0 1730200.0 1798970.0 1570090.0 False True 2242403.9403489856 1673390.7278283688 1672758.8260249004 1364364.7133914733 2243953.8399965884 2056752.4218248932 1644400.4788722326 1724198.3400317172 1472322.396343238 1556180.224111535 1.4409667374029471 1.0753193633364364 1.0749133038108896 0.876739526856811 1.4419627015101815 1.3216672400519345 1.0566902556617856 1.107968288837566 0.9461130359652439 1.0 20.569577720506473 -7.354370986776048 1.8834124700291006 0.9849682456649489 1.1845074895044325 0.19978155875216907 0.1690952816263442 0.6904113329995207 4.458494699750782 0.14015004011446178 0.05177160884042011 4.422104621418189e-08 7.354370986776048 0.19953924383948363 KNLALS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 KNLALSR 7 1 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 KNLALS(1)R 79.986 0.0098953 375350000.0 352830.0 402300.0 298920.0 456100.0 519430.0 457890.0 389200.0 429550.0 630060.0 390930.0 True False 333257.8165508326 382972.9041353892 318188.8614889106 499447.6068685345 560306.1858475801 455032.13866432913 428544.13422595826 428059.9913077237 515656.9865200749 387466.66433893796 0.8600941635054159 0.9884022017449795 0.8212031918456182 1.2890079401298915 1.4460758496567077 1.1743775156519995 1.1060154941512275 1.1047659855797982 1.33084219619214 1.0 18.563712668019335 -5.262050188602263 24.998372444337594 1.2160204119777343 0.8997500788125655 0.5685522987012952 0.12645779383927375 40.869589971701245 1672685.5677198786 0.03629655526104637 0.05767004133244569 5.469527514522894e-06 5.262050188602263 -0.3162703331651687 KNLS(ph)PGAVESDVR ddPTM_KYSE-520_SHP099_60min_R1 3 KNLSPGAVESDVR 13 1 A0A3B3IT15;P53621;P53621-2;A0A3B3IU78;A0A3B3ISK1;A0A3B3ITV3;A0A3B3ISC6;A0A3B3IS84 A0A3B3IT15 COPA Coatomer subunit alpha;Xenin;Proxenin 1 KNLS(1)PGAVESDVR;KNLS(1)PGAVESDVR;KNLS(1)PGAVESDVR 148.24 4.7931e-06 1344730000.0 2414900.0 2589540.0 2547530.0 1969990.0 2294810.0 2221430.0 1986470.0 2106700.0 2933690.0 2256640.0 True False 2280940.683016197 2465134.611421215 2711747.8599921153 2157217.257300909 2475398.4913171814 2207565.231372381 2187281.7736789286 2099392.349407478 2401005.848306637 2236647.9252393525 1.0198031872951592 1.1021558572556345 1.2124160577047103 0.9644867361366483 1.1067448136935898 0.9869971963227698 0.9779285103375664 0.9386333565139956 1.0734840388657485 1.0 21.092906746379807 -5.950076311588564 1.3150178570521067 0.9909610356540103 1.0977124371524964 0.2551417194770561 0.06892759409259926 0.5564409780117725 2.004608224457167 0.028863131035064764 0.03418476126399957 1.1218213173543936e-06 5.950076311588564 0.10675140149848616 KNNHHEENISSK ddPTM_KYSE-520_SHP099_60min_R1 2 KNNHHEENISSK 12 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 180.09 1.234e-06 1371640000.0 1433160.0 1687350.0 1163440.0 1848080.0 1515420.0 1624590.0 1188630.0 1475160.0 1542540.0 926930.0 False True 1353659.7578663703 1606287.173236013 1238437.2039698183 2023720.9675544868 1634674.9324396732 1614450.3311989387 1308788.3203108949 1470043.0142649314 1262453.6202689863 918718.1213406285 1.4734222896257432 1.7484004461477884 1.3480056343752571 2.2027659197593668 1.7792997595979638 1.7572858243430218 1.4245809350109053 1.600102338375332 1.3741468584801244 1.0 19.809262759973365 -8.043722097971887 0.8322631244736514 1.002625597873784 1.7146597102208407 0.48012551739110776 0.22282014249684262 0.610840768417943 0.9540455745672696 0.21768222721515484 0.07868393569354003 9.04227897800798e-09 8.043722097971887 0.7120341123470568 KNPLPPSVGVVDKK ddPTM_KYSE-520_SHP099_60min_R1 1 KNPLPPSVGVVDKK 14 2 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 64.675 0.019548 512380000.0 2689600.0 2438100.0 1982100.0 1904000.0 2397400.0 2314900.0 2179100.0 2679500.0 2696800.0 2504300.0 False True 2540402.5264153243 2320970.0163372927 2109869.3374721296 2084955.587541525 2586061.740659929 2300451.850431446 2399384.693966561 2670205.4399000024 2207129.100795702 2482113.850315918 1.0234834820699248 0.9350779844534064 0.8500292350423773 0.8399919235276643 1.0418787761612065 0.9268115764063962 0.9666698784429942 1.075778792161425 0.8892134824979053 1.0 21.2431378602635 -5.766626509859635 24.99999258989977 0.9835158797576511 0.9093467942963533 0.2068214274589213 0.06826454156988841 208.78403495409387 1006257.5815109537 0.02133784360706049 0.024926192410465176 1.711486548534176e-06 5.766626509859635 -0.07416908546129775 KNPSVVIKPEACS(ph)PQFGK ddPTM_KYSE-520_SHP099_60min_R1 1 KNPSVVIKPEACSPQFGK 18 2 A0A0U1RQJ8;Q8WXE1-5;Q8WXE1-3;Q8WXE1-2;Q8WXE1;A0A0U1RRM7;A0A0U1RQW3 A0A0U1RQJ8 ATRIP ATR-interacting protein 1 KNPSVVIKPEACS(1)PQFGK 149.85 2.6305e-06 2307000000.0 2426300.0 2183300.0 2038600.0 1980500.0 2122900.0 2233600.0 2086300.0 2059800.0 2446600.0 2268000.0 True False 2291708.3022908657 2078410.99079989 2170011.417875326 2168726.124540964 2289960.152351282 2219659.273888148 2297203.5643258397 2052655.034560936 2002359.1137669703 2247907.284477298 1.01948524216992 0.9245981830087708 0.9653473845919383 0.9647756113060749 1.0187075633253986 0.9874336407091991 1.0219298545758324 0.9131404345434274 0.890765881490782 1.0 21.10015110177658 -7.278096390511816 24.84415676144955 0.9264648631391513 0.983372878866096 0.2605276749346571 0.038781942175622454 974.137798922221 1452931.4328738262 0.020913422618806507 0.010090865807737113 5.2711285713415554e-08 7.278096390511816 0.056908015726944705 KNPTRWS(ph)TTAGFLK ddPTM_KYSE-520_SHP099_60min_R1 1 KNPTRWSTTAGFLK 14 2 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 KNPT(0.005)RWS(0.991)T(0.003)T(0.001)AGFLK 115.34 0.00010386 487610000.0 385810.0 367840.0 426230.0 361320.0 344480.0 352620.0 263760.0 346650.0 439240.0 331930.0 True False 364408.35020683275 350168.4142609038 453705.46779211296 395659.7441651804 371588.6161769134 350419.16778225236 290423.434849534 345447.5520587185 359485.08833932993 328989.3584376326 1.1076599922179993 1.0643761121145385 1.3790885819126673 1.2026521041414981 1.1294852147850138 1.0651383055257158 0.882774556079115 1.0500265227399626 1.0926951863930228 1.0 18.327681393419972 -6.214118827484626 2.592560407361526 1.0085530743021032 1.1903956617755647 0.4378394465191464 0.09228913091550325 0.2882314030742559 3.822422123669753 0.03638935927706992 0.03478050575988617 6.107748876832594e-07 6.214118827484626 0.1818425874734615 KNQKPSQVNGAPGS(ph)PTEPAGQK ddPTM_KYSE-520_SHP099_60min_R1 6 KNQKPSQVNGAPGSPTEPAGQK 22 2 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 KNQKPSQVNGAPGS(0.787)PT(0.213)EPAGQK;KNQKPSQVNGAPGS(0.954)PT(0.045)EPAGQK;KNQKPSQVNGAPGS(0.988)PT(0.012)EPAGQK;KNQKPSQVNGAPGS(1)PTEPAGQK;KNQKPSQVNGAPGS(0.983)PT(0.017)EPAGQK;KNQKPSQVNGAPGS(1)PTEPAGQK 266.98 2.9197e-36 24659160000.0 16903990.0 15579510.0 14435090.0 13692710.0 15549700.0 15703900.0 14219910.0 15220550.0 17496940.0 14578390.0 True False 15966291.977431351 14831046.954278735 15365598.998360632 14994061.041536627 16773372.924309565 15605886.135034066 15657397.27574778 15167753.464553082 14319936.757963637 14449236.806415781 1.104992062303385 1.026424243230163 1.063419418217159 1.037706090807435 1.1608483651442278 1.0800491641264198 1.0836141372391066 1.0497269625907344 0.9910514271317962 1.0 23.784489957305865 -7.615702737028373 3.1121138753277267 0.994603706521961 1.078186252128989 0.4737479856996075 0.03497854288192582 0.237951813830044 4.367005071404737 0.029968112491446826 0.009588416485827447 2.4226867437060517e-08 7.615702737028373 0.08358254560702816 KNQKPSQVNGAPGSPT(ph)EPAGQK ddPTM_KYSE-520_SHP099_60min_R1 1 KNQKPSQVNGAPGSPTEPAGQK 22 2 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 KNQKPSQVNGAPGS(0.414)PT(0.586)EPAGQK 120.08 2.8695e-05 681840000.0 1057400.0 1055700.0 900650.0 1012100.0 1019600.0 1128800.0 902850.0 957650.0 1251200.0 1114200.0 True False 998743.9141253597 1004982.5873619934 958707.340090952 1108289.6797010393 1099836.7192695688 1121754.740492901 994118.8889668696 954328.1356671903 1024013.6201852508 1104329.054834484 0.904389782875948 0.9100390712011281 0.8681355759806957 1.0035864535567698 0.9959320679418433 1.0157794323912168 0.9002016967812799 0.8641700872483378 0.9272721891200528 1.0 20.074738682603567 -5.247689349883022 24.981128934793368 0.9540378793323896 0.8957732368447888 0.270103042995553 0.047819743820813276 1353.4324722696822 2458920.0388628547 0.014748301670121748 0.025382685821120632 5.653412178460349e-06 5.247689349883022 -0.05826464248760077 KNQS(ph)SEDILR ddPTM_KYSE-520_SHP099_60min_R1 2 KNQSSEDILR 10 1 Q13625;Q13625-3;Q13625-2;H0Y847 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 KNQS(0.995)S(0.005)EDILR;KNQS(0.5)S(0.5)EDILR 162.13 5.2398e-05 726130000.0 2233400.0 1663040.0 1524140.0 1275060.0 1515090.0 1485610.0 1338350.0 1402640.0 2074900.0 1395120.0 True False 2109508.84982748 1583145.0621260682 1622388.5031102232 1396241.3190392335 1634318.9633171149 1476337.7569309494 1473643.4790372844 1397774.5692186365 1698150.4639724859 1382760.322186935 1.5255780889714423 1.144916466522709 1.1732969749553552 1.0097493373479052 1.1819249779544743 1.0676743707803351 1.0657258929057287 1.0108581702778074 1.2280873530466498 1.0 20.399119681012667 -3.1283261127975512 1.1901622491463553 1.0852707604305412 6.362922772724192 0.7498115283501394 0.07474509003689732 9.011306805702125 1.265259877428813 0.02078136041854643 107.84425383737694 0.0007441729627377676 3.1283261127975512 5.277652012293651 KNQSS(ph)EDILR ddPTM_KYSE-520_SHP099_60min_R1 4 KNQSSEDILR 10 1 Q13625;Q13625-3;Q13625-2;H0Y847 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 KNQS(0.262)S(0.738)EDILR;KNQS(0.219)S(0.781)EDILR;KNQS(0.288)S(0.712)EDILR;KNQS(0.292)S(0.708)EDILR 161.33 7.7848e-05 4832100000.0 8678500.0 6521900.0 5626100.0 4834500.0 5536500.0 5477700.0 5066700.0 4807580.0 7555100.0 5235800.0 True False 8197086.304839159 6208578.134428516 5988767.4080782775 5293969.426454572 5972191.051624138 5443511.642450353 5578891.482226775 4790903.6270776065 6183284.288572236 5189414.885390757 1.5795781385519205 1.196392709302721 1.1540351928572639 1.0201476550580215 1.1508409297620534 1.0489644329218946 1.075052121566243 0.9232068995995986 1.19151858641702 1.0 22.307140450964656 KNREELDK ddPTM_KYSE-520_SHP099_60min_R1 5 KNREELDK 8 2 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;;; 150.35 0.00027349 27675679000.0 20635130.0 20129470.0 10029156.0 9892986.0 20450340.0 20897850.0 13570080.0 16682288.0 15516454.0 15162952.0 False True 19490458.2037882 19162420.04624955 10675651.442976957 10833212.415005287 22059665.4114822 20767418.76648615 14941876.117618144 16624421.036603283 12699057.091574408 15028620.041878164 1.2968894116343916 1.2750618481838187 0.7103547373763263 0.7208387985602059 1.4678437108671056 1.3818579955189814 0.9942280845467978 1.106184133358773 0.8449915598496544 1.0 23.841209208386736 -7.742674195252232 22.09934357927896 0.9224963340187468 1.1136655688574835 0.09312059750075163 0.24500952671787637 152.724509528607 179866.02007822858 0.18130372364157243 0.06810644943025505 1.8085303643276876e-08 7.742674195252232 0.1911692348387367 KNS(ph)AIPSELNEK ddPTM_KYSE-520_SHP099_60min_R1 2 KNSAIPSELNEK 12 1 Q96CV9-3;Q96CV9-2;Q96CV9 Q96CV9-3 OPTN Optineurin 1 KNS(0.999)AIPS(0.001)ELNEK;KNS(1)AIPSELNEK 91.45700000000001 0.0016873 1528870000.0 2624070.0 2303970.0 1892340.0 1526300.0 1499590.0 1898390.0 1706400.0 1731490.0 1831810.0 2061010.0 True False 2478507.6061461437 2193283.822870527 2014323.2642510522 1671359.0931011713 1617599.2015000521 1886541.4438379854 1878899.5648591346 1725483.8653228055 1499199.4801722686 2042751.0548415144 1.2133184806204578 1.0736911958372193 0.9860835756157924 0.81819029741284 0.7918728998652029 0.9235297856616951 0.9197888114687122 0.8446863171277011 0.7339119843404428 1.0 20.962081966332562 -4.712524626623935 1.641670870940829 0.8578116372840201 1.2150159699457528 0.7096536882803605 0.07356960969041638 0.2555567178073299 1.170740356655396 0.021581660207731168 0.11159250314974906 1.9385427079706064e-05 4.712524626623935 0.3572043326617327 KNS(ph)APQLPLLQSSGPFVEGSIVR ddPTM_KYSE-520_SHP099_60min_R1 2 KNSAPQLPLLQSSGPFVEGSIVR 23 1 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 1 KNS(1)APQLPLLQSSGPFVEGSIVR;KNS(1)APQLPLLQSSGPFVEGSIVR 139.72 6.512300000000001e-07 368339000.0 179402.0 211806.0 168999.0 138975.0 148349.0 221397.0 138072.0 192389.0 256854.0 186681.0 True False 169450.21343097952 201630.5218327126 179892.94594796066 152183.14221564253 160023.22230965228 220015.1791999527 152029.66521286342 191721.6474629301 210215.78836242162 185027.15157562023 0.9158126901268626 1.0897347773864778 0.9722516096478887 0.8224908664469472 0.8648634589407874 1.189096720813069 0.821661382765919 1.0361811541187447 1.1361348135790053 1.0 17.49737746717449 KNS(ph)FGYR ddPTM_KYSE-520_SHP099_60min_R1 3 KNSFGYR 7 1 H0Y4V9;Q92615 H0Y4V9 LARP4B La-related protein 4B 1 KNS(0.676)FGY(0.324)R;KNS(1)FGYR;KNS(0.994)FGY(0.006)R 103.26 0.0029091 13331890000.0 9533100.0 8574830.0 7949670.0 7854290.0 8142930.0 8313550.0 8313300.0 8524820.0 8923700.0 8246560.0 True False 9004279.939236298 8162882.29571777 8462118.448121725 8600759.360121606 8783732.264066057 8261662.050695204 9153689.493989354 8495249.389127938 7303381.02817064 8173501.894126602 1.1016428522157296 0.9987007284580843 1.0353112481936928 1.0522734895677979 1.0746595985226308 1.0107860936120847 1.1199226001974876 1.039364705504325 0.8935436882223979 1.0 22.96252289528983 -7.651270510673829 7.0958604899042275 0.9480224016231448 1.0538091906430294 0.5073649858965587 0.04247719659349821 0.16264802024076538 9.342806304966231 0.027755436034045226 0.010263624158774378 2.2321814223034935e-08 7.651270510673829 0.10578678901988459 KNS(ph)GAEAAQLSER ddPTM_KYSE-520_SHP099_60min_R1 3 KNSGAEAAQLSER 13 1 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 KNS(1)GAEAAQLSER;KNS(0.996)GAEAAQLS(0.004)ER;KNS(0.999)GAEAAQLS(0.001)ER 129.05 4.9202e-05 1541010000.0 1359470.0 1341750.0 1235780.0 1003400.0 1150890.0 1318630.0 1173200.0 1092350.0 1541330.0 1118510.0 True False 1284057.4890637433 1277290.3159921917 1315440.3561179102 1098762.8343167899 1241458.4953316548 1310399.941049038 1291798.5053286056 1088560.8928064073 1261463.3257673676 1108600.871587613 1.1582685184297765 1.1521642718564715 1.1865770538625728 0.9911257175391409 1.1198426116639961 1.1820304084484718 1.1652512084702205 0.9819231796629326 1.1378877268613747 1.0 20.080308616316284 -7.833076952637559 0.016091095848977083 5.437142810082806e-07 2.160656860065185 0.25175494754668826 0.06792407823467937 719.6508710567562 9.109117986390794 619.5175420982839 601.2215095517879 1.4686660216605039e-08 7.833076952637559 2.160656316350904 KNS(ph)IHELLLER ddPTM_KYSE-520_SHP099_60min_R1 6 KNSIHELLLER 11 1 A0A3B3IS79;F5H527;Q76I76 A0A3B3IS79 SSH2 Protein phosphatase Slingshot homolog 2 1 KNS(1)IHELLLER;KNS(1)IHELLLER;KNS(1)IHELLLER;KNS(1)IHELLLER;KNS(1)IHELLLER;KNS(1)IHELLLER 224.97 3.0288e-10 5580010000.0 4103733.0 3710917.0 3659263.0 3776234.0 3478022.0 3638519.0 3400996.0 3571606.0 4257560.0 3349187.0 True False 3876090.7499010777 3532638.9771200214 3895144.9480078146 4135126.1439938485 3751722.544161814 3615809.653280907 3744801.8662023284 3559216.932405103 3484494.42835351 3319515.8088080594 1.1676675072961524 1.0642030888198988 1.1734075607268901 1.2457015969080896 1.1302017403281917 1.089258151350464 1.128116894718744 1.072209664723095 1.049699603510757 1.0 21.662541391867997 -7.487730834917637 0.7664739067246996 1.0021499965342147 1.1539686633805877 0.5636598045372501 0.044873047749561676 0.5100799489806618 0.5980146059055681 0.04561698654674154 0.019454201254670088 3.2528884097917157e-08 7.487730834917637 0.15181866684637302 KNS(ph)ITEIS(ph)DNEDDLLEYHR ddPTM_KYSE-520_SHP099_60min_R1 6 KNSITEISDNEDDLLEYHR 19 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 2 KNS(0.979)IT(0.029)EIS(0.993)DNEDDLLEYHR;KNS(0.746)IT(0.254)EIS(1)DNEDDLLEYHR;KNS(0.858)IT(0.154)EIS(0.988)DNEDDLLEYHR;KNS(0.998)IT(0.003)EIS(0.999)DNEDDLLEYHR;KNS(0.978)IT(0.033)EIS(0.989)DNEDDLLEYHR;KNS(0.928)IT(0.083)EIS(0.989)DNEDDLLEYHR 220.53 4.3038999999999996e-19 2684400000.0 1781350.0 1570500.0 1457880.0 1608750.0 1557470.0 1626380.0 1573030.0 1804870.0 1867060.0 1533790.0 True False 1682534.9644668133 1495050.822631439 1551857.277490475 1761645.116311674 1680034.0282078988 1616229.1591449722 1732047.2236933666 1798609.327229823 1528048.968752457 1520201.8138705622 1.1067839474437522 0.9834554918895362 1.0208231981642721 1.1588231906041322 1.1051388130700819 1.0631674981559955 1.1393534778671446 1.183138522016634 1.0051619165365389 1.0 20.535831430192534 -5.2342665351090805 24.60370674502871 1.102297862675361 1.0316643251569526 0.13027334225832 0.06373972642492529 972.7135841622638 880743.6430689472 0.0166266272273935 0.028788489538687036 5.830871423345625e-06 5.2342665351090805 -0.0706335375184084 KNS(ph)ITEIS(ph)DNEDDLLEYHRR ddPTM_KYSE-520_SHP099_60min_R1 1 KNSITEISDNEDDLLEYHRR 20 2 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 2 KNS(0.881)IT(0.2)EIS(0.919)DNEDDLLEYHRR 63.803000000000004 0.011701000000000001 1118700000.0 311190.0 321770.0 295200.0 305600.0 221080.0 271250.0 265030.0 327640.0 362760.0 244350.0 True False 293927.670358115 306311.68621338357 314229.0643367001 334644.1321180096 238477.73822686987 269557.0281349214 291821.81884353986 326503.4933117506 296891.9284354229 242185.24910142316 1.2136481121318126 1.2647825883280996 1.2974740018336384 1.3817692586961239 0.9846914257234525 1.1130200090016027 1.2049529024838739 1.348155986060969 1.2258877431097774 1.0 17.88575147119366 -10.138916412454307 4.519954031687578 0.9999709704958311 1.226411536892411 0.2814668272385842 0.10834659535140065 3.402267729066056e-05 6.481325395899763e-06 0.11261009360625707 0.027308460760041762 7.262457226372284e-11 10.138916412454307 0.22644056639657983 KNS(ph)ITEISDNEDDLLEYHR ddPTM_KYSE-520_SHP099_60min_R1 4 KNSITEISDNEDDLLEYHR 19 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KNS(0.963)IT(0.035)EIS(0.002)DNEDDLLEYHR;KNS(0.999)IT(0.001)EISDNEDDLLEYHR;KNS(0.999)IT(0.001)EISDNEDDLLEYHR;KNS(0.633)IT(0.366)EIS(0.002)DNEDDLLEYHR 308.35 1.7926999999999997e-53 1760860000.0 1045071.0 913546.0 859576.0 1038330.0 978543.0 978478.0 1034978.0 1144859.0 1205812.0 1016582.0 True False 987098.828332611 869657.8788994978 914985.6443302277 1137012.5710147014 1055548.7669519444 972370.9558540145 1139603.6766518834 1140887.7513410987 986866.9368468792 1007575.8743688287 0.9796769190716828 0.8631189978067644 0.9081059477564388 1.1284634735095807 1.0476121886236778 0.9650597841707281 1.1310350968514011 1.1323095166959807 0.979446771157634 1.0 19.942457052696792 -5.244569758006648 24.493976290470577 1.0594915435213563 0.9115824299557952 0.4907494797719516 0.06417211523739816 504.24665156792634 732142.9739080678 0.017432431239472433 0.030091886388484028 5.694167549297248e-06 5.244569758006648 -0.14790911356556113 KNS(ph)ITEISDNEDDLLEYHRR ddPTM_KYSE-520_SHP099_60min_R1 2 KNSITEISDNEDDLLEYHRR 20 2 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 KNS(0.999)IT(0.001)EISDNEDDLLEYHRR;KNS(0.998)IT(0.002)EISDNEDDLLEYHRR 195.64 2.5266999999999997e-13 1692570000.0 344380.0 342160.0 331490.0 295260.0 261970.0 300080.0 243190.0 331650.0 409080.0 261410.0 True False 325276.55489549035 325722.1200073697 352858.3758027534 323321.4216268444 282585.5485945949 298207.0894109757 267774.01850567985 330499.5835576917 334801.38406760036 259094.1107739023 1.2554378558582597 1.2571575596004578 1.361892691226294 1.2478918207021303 1.0906675869649245 1.1509605082116483 1.0335009842788438 1.2755966647428014 1.292199900134989 1.0 17.983116697774786 -5.588284131014033 6.101907422781793 1.150075083889262 1.2908215832954781 0.36575575202742616 0.09115809195396 0.24055914716707713 16.654386136072244 0.02785443307511074 0.036230186180855495 2.580571335991324e-06 5.588284131014033 0.1407464994062162 KNS(ph)LISSLEEEVSILNR ddPTM_KYSE-520_SHP099_60min_R1 8 KNSLISSLEEEVSILNR 17 1 A0A087WY61;Q14980-2;Q14980;Q14980-4;Q14980-3;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 KNS(1)LISSLEEEVSILNR;KNS(0.999)LIS(0.001)SLEEEVSILNR;KNS(0.949)LIS(0.051)SLEEEVSILNR;KNS(1)LISSLEEEVSILNR;KNS(0.998)LIS(0.002)SLEEEVSILNR;KNS(0.998)LIS(0.002)SLEEEVSILNR;KNS(0.987)LIS(0.013)SLEEEVSILNR;KNS(0.984)LIS(0.014)S(0.002)LEEEVSILNR 338.16 5.749499999999999e-59 12739610000.0 2766746.0 3069052.0 2567703.3 2009758.9 2289499.0 2522263.2 2113448.5 2401323.8 3286377.0 2517069.0 True False 2613269.084008589 2921610.135179034 2733221.5631885417 2200765.7815999556 2469669.5458326377 2506520.8197827702 2327096.4996496616 2392994.1682109893 2689653.7796223946 2494769.7269100472 1.0474991161790759 1.1710941108771828 1.095580699776181 0.8821518707162457 0.9899388786040394 1.0047102915936363 0.932790098640462 0.959204427726837 1.078117050487752 1.0 21.250475226900132 -5.109918288702626 7.511543048486316 0.9763659598900744 1.1150917551620536 0.523072888279432 0.055405445095259964 0.18952940185684514 11.482633178123002 0.014650961827742157 0.02556411760894369 7.763931791022343e-06 5.109918288702626 0.13872579527197926 KNS(ph)LKEDHEETK ddPTM_KYSE-520_SHP099_60min_R1 6 KNSLKEDHEETK 12 2 Q8WUM9 Q8WUM9 SLC20A1 Sodium-dependent phosphate transporter 1 1 KNS(1)LKEDHEETK;KNS(1)LKEDHEETK;KNS(1)LKEDHEETK;KNS(1)LKEDHEETK;KNS(1)LKEDHEETK;KNS(1)LKEDHEETK 193.8 4.172e-08 11452760000.0 15433380.0 16197120.0 14140490.0 21261500.0 19243100.0 18516000.0 18395900.0 23913600.0 28076500.0 13361660.0 True False 14577259.645719728 15418986.042827206 15052008.610983936 23282186.56749691 20757422.49173816 18400434.775838528 20255537.09868266 23830649.303076204 22978515.35096799 13243286.087614177 1.1007282897371788 1.1642870161392842 1.136576565015942 1.758036971599643 1.56739213775285 1.3894160900931976 1.5294947919026467 1.7994513707110722 1.7351067702493201 1.0 23.658757810078765 -5.244156541355198 23.819619300130526 1.5676020235921135 1.1369061283078772 0.4174148171467724 0.2180620586681602 401.71600954763375 553652.3566182735 0.057472648162208366 0.09918456666145052 5.699587937225922e-06 5.244156541355198 -0.43069589528423635 KNS(ph)LRVEGDNIYVR ddPTM_KYSE-520_SHP099_60min_R1 4 KNSLRVEGDNIYVR 14 2 O43491;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 KNS(1)LRVEGDNIYVR;KNS(1)LRVEGDNIYVR;KNS(1)LRVEGDNIYVR;KNS(1)LRVEGDNIYVR 138.77 4.8435e-06 11030540000.0 4857700.0 5267340.0 4898800.0 3976660.0 3720890.0 3234410.0 3062420.0 3253530.0 4700050.0 3568810.0 True False 4588233.697415123 5014289.07996147 5214584.486357139 4354600.5707735745 4013702.874031918 3214222.8474465315 3371999.2999389987 3242244.2638096116 3846639.398618677 3537193.119892167 1.297139721213468 1.417589854442082 1.474215376319659 1.2310892911909561 1.134714090519965 0.9086930621261976 0.9532980489461643 0.9166149978004178 1.0874835691006726 1.0 21.75417355723631 -5.769482525844623 1.9128878493377703 0.96864301416239 1.3952938471894991 0.8731757380614128 0.06963566974226401 0.10448307432104098 0.7882588722912013 0.024040948103678052 0.031265609593524334 1.7002683638043581e-06 5.769482525844623 0.42665083302710916 KNS(ph)PGNGSALGPR ddPTM_KYSE-520_SHP099_60min_R1 4 KNSPGNGSALGPR 13 1 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4;Q9UKE5-5;Q9UKE5-8;Q9UKE5-3;Q9UKE5-7 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 1 KNS(1)PGNGSALGPR;KNS(0.995)PGNGS(0.005)ALGPR;KNS(0.999)PGNGS(0.001)ALGPR;KNS(0.987)PGNGS(0.013)ALGPR 128.3 5.4117e-05 2059390000.0 1919480.0 1763310.0 1560110.0 1510380.0 1608090.0 1610360.0 1553640.0 1707140.0 2073890.0 1661170.0 True False 1813002.6180114846 1678597.940817728 1660677.1868642597 1653926.0610876956 1734637.5342194976 1600309.1459072893 1710697.0932652021 1701218.3297894725 1697323.854512457 1646453.3261707022 1.101156400362797 1.0195235504924924 1.008639091353193 1.004538686155394 1.0535601019762235 0.9719735873893648 1.039019488784366 1.0332624088082363 1.0308970363952368 1.0 20.65093018416877 -4.261644312178192 7.633040869701549 1.0185478229895997 1.1019872344931314 0.563749620074266 0.021958173559619015 0.07021194298906976 42.53801709346418 0.005261947614767846 0.03036388822433946 5.474641532843596e-05 4.261644312178192 0.08343941150353174 KNS(ph)SRDS(ph)GRGDSVSDSGSDALR ddPTM_KYSE-520_SHP099_60min_R1 2 KNSSRDSGRGDSVSDSGSDALR 22 3 Q5VZS7;Q53EL6-2;Q53EL6 Q5VZS7 PDCD4 Programmed cell death protein 4 2 KNS(0.704)S(0.363)RDS(0.502)GRGDS(0.403)VS(0.012)DS(0.012)GS(0.004)DALR;KNS(0.743)S(0.261)RDS(0.981)GRGDS(0.012)VS(0.001)DS(0.001)GS(0.001)DALR 74.28 0.028361 143609000.0 61362.0 51442.0 57180.0 51079.0 56203.0 52362.0 54594.0 59553.0 86785.0 48250.0 True False 57958.12753788567 48970.6491039838 60865.91429123478 55933.53280253866 60625.85634867359 52035.189335302326 60112.8943060944 59346.4245427747 71027.03167181663 47822.54253793195 1.2119415752919112 1.0240076437830798 1.2727452590576311 1.1696060024030137 1.267725493695495 1.0880891431907658 1.2569991287772702 1.2409717550191361 1.4852207327847387 1.0 15.54540321410243 -6.962013529510725 23.435404949926415 1.2676548971804735 1.174229769643832 0.06158378582447277 0.13021644791952228 191.38168581392935 118070.12271547172 0.05169278163608932 0.03485110321430483 1.0914063355016032e-07 6.962013529510725 -0.09342512753664156 KNS(ph)STDQGS(ph)DEEGSLQK ddPTM_KYSE-520_SHP099_60min_R1 1 KNSSTDQGSDEEGSLQK 17 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 2 KNS(0.984)S(0.008)T(0.009)DQGS(1)DEEGSLQK 135.58 1.0174e-05 497940000.0 528130.0 492790.0 503590.0 567110.0 585130.0 609390.0 570900.0 643420.0 729080.0 613920.0 True False 498833.57609894633 469115.62870712986 536052.2171724895 621007.9638921615 631176.4020657154 605586.5709682566 628612.1434470695 641188.1261953562 596697.450611143 608481.1464225324 0.8198012034255434 0.7709616501106406 0.8809676689641459 1.0205870264728472 1.037298206816458 0.9952429496438895 1.0330840111364075 1.0537518376125856 0.9806342466308616 1.0 19.21485303666242 -5.097650089054684 2.8625691692644577 1.020728749841964 0.7965710497453832 0.9334397382730751 0.024294609605128036 0.05655205655288014 0.8943873626822212 0.0067003165258238675 0.013693087625312093 7.98637890448823e-06 5.097650089054684 -0.22415770009658076 KNS(ph)TGSGHSAQELPTIR ddPTM_KYSE-520_SHP099_60min_R1 4 KNSTGSGHSAQELPTIR 17 1 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 KNS(0.953)T(0.046)GSGHSAQELPTIR;KNS(0.97)T(0.03)GSGHSAQELPTIR;KNS(0.677)T(0.109)GS(0.21)GHS(0.004)AQELPTIR;KNS(0.95)T(0.046)GS(0.004)GHSAQELPTIR 216.19 3.1462000000000003e-18 4861680000.0 1041920.0 1506550.0 1603100.0 3696490.0 1133710.0 1223410.0 1279870.0 1054940.0 1371150.0 1058070.0 True False 984122.620583975 1434173.0766223466 1706438.3910506896 4047803.2982097524 1222926.5270724832 1215774.2443891026 1409251.7499274823 1051280.6593648458 1122183.7238786793 1048696.322966005 0.9384247842126522 1.367577100457553 1.6271997466572659 3.859843130527471 1.1661398064348187 1.159319640742665 1.3438129981630205 1.0024643324690332 1.0700750057984676 1.0 20.000165538203742 -5.944853805555197 24.99999896515455 1.1332260390205842 1.9624924216959432 0.2388866606694129 0.721031441164847 141.00537216797895 63922.52141870279 0.2358606424176036 0.2674408183769697 1.1353929531725155e-06 5.944853805555197 0.829266382675359 KNS(ph)VHEQEAINS(ph)DPELSNCENFQK ddPTM_KYSE-520_SHP099_60min_R1 2 KNSVHEQEAINSDPELSNCENFQK 24 1 Q8IX90-3;Q8IX90 Q8IX90-3 SKA3 Spindle and kinetochore-associated protein 3 2 KNS(1)VHEQEAINS(0.992)DPELS(0.008)NCENFQK;KNS(1)VHEQEAINS(1)DPELSNCENFQK 165.37 1.3022000000000002e-10 893350000.0 1115514.0 977225.0 917182.0 982639.0 963633.0 894449.0 955552.0 973539.0 1196110.0 1001050.0 True False 1053634.2146979712 930277.6441553711 976305.0192630861 1076028.7151188126 1039465.4347782384 888866.4120119897 1052148.5214488255 970162.0204347117 978926.575479364 992181.475805115 1.0619369947851425 0.9376083577860478 0.9839984348335613 1.0845079668975466 1.0476565629637002 0.8958707995336345 1.0604395940722937 0.9778070283437459 0.9866406492673176 1.0 19.92024449655999 KNS(ph)VHEQEAINSDPELSNCENFQK ddPTM_KYSE-520_SHP099_60min_R1 3 KNSVHEQEAINSDPELSNCENFQK 24 1 Q8IX90-3;Q8IX90 Q8IX90-3 SKA3 Spindle and kinetochore-associated protein 3 1 KNS(1)VHEQEAINSDPELSNCENFQK;KNS(1)VHEQEAINSDPELSNCENFQK;KNS(0.998)VHEQEAINS(0.002)DPELSNCENFQK 322.77 2.3669999999999997e-61 3546060000.0 2272340.0 2142040.0 2019060.0 2159820.0 2150340.0 2138660.0 2160810.0 2215430.0 2678230.0 2260230.0 True False 2146288.770402513 2039133.1831324105 2149211.838210219 2365088.6434264374 2319559.5242390404 2125311.829644354 2379245.762273361 2207745.190415249 2191930.9446840966 2240206.1206323295 0.9580764692298461 0.9102435549800376 0.959381290148236 1.0557459966044813 1.035422367109823 0.9487126251777471 1.0620655574326283 0.9855098466528974 0.9784505651048724 1.0 21.095200049612966 -5.036732093911567 8.169495671304272 1.0094914051166557 0.9342204585584591 0.44882531746708165 0.034704054345559586 0.24126222036474537 49.95178467801862 0.009310944720114588 0.01655190547361624 9.188992691072912e-06 5.036732093911567 -0.07527094655819655 KNSDDAPWS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KNSDDAPWSPK 11 1 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y589;Q9UPP1-5 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 KNSDDAPWS(1)PK;KNSDDAPWS(1)PK 96.67299999999999 0.0013552 1513570000.0 2817300.0 2613100.0 2521900.0 2462500.0 2685800.0 2588700.0 2591800.0 2657600.0 3034300.0 2747900.0 True False 2661018.7528516883 2487562.753656937 2684465.7091826657 2696535.259622381 2897157.1798883947 2572542.963070493 2853804.437530413 2648381.405888502 2483347.6084783445 2723555.7438338487 0.9770384758513775 0.9133511437350963 0.9856474262589693 0.9900789678079319 1.0637407317428993 0.9445530787812038 1.0478230320754214 0.9723984581128762 0.911803481203079 1.0 21.377059964877652 -4.900378848278609 8.079912140161603 0.9921286864063803 0.9454285425606596 0.1385640682249819 0.04408174336504741 0.4307663527864238 30.9759130198179 0.011415363088562945 0.02393218530068837 1.257827691744492e-05 4.900378848278609 -0.04670014384572074 KNSIT(ph)EIS(ph)DNEDDLLEYHR ddPTM_KYSE-520_SHP099_60min_R1 1 KNSITEISDNEDDLLEYHR 19 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 2 KNS(0.322)IT(0.685)EIS(0.993)DNEDDLLEYHR 66.012 0.019636 894030000.0 637520.0 560400.0 592510.0 557750.0 657950.0 647910.0 700890.0 785530.0 836420.0 719580.0 True False 602155.4947353876 533477.5428224509 630704.14264952 610758.392306348 709726.9217765913 643866.1533599878 771742.8012272136 782805.1797740805 684547.2124323417 713205.081024769 0.8442950152152313 0.7480001994039687 0.8843236811259007 0.8563573207145124 0.9951231990058454 0.9027784160410753 1.0820769814459743 1.0975877774865352 0.9598181934553098 1.0 19.44395745550281 -5.760220019620668 0.9007599666398729 1.0352113114234986 0.7965076098099538 0.67615395491561 0.05954056202059295 0.3328463131478803 0.5827854320693405 0.029305940816724274 0.047612452057552164 1.7369206576686064e-06 5.760220019620668 -0.23870370161354482 KNSLIS(ph)SLEEEVSILNR ddPTM_KYSE-520_SHP099_60min_R1 1 KNSLISSLEEEVSILNR 17 1 A0A087WY61;Q14980-2;Q14980;Q14980-4;Q14980-3;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 KNS(0.002)LIS(0.97)S(0.028)LEEEVSILNR 135.94 1.4875e-05 25339000.0 235570.0 258730.0 217180.0 188260.0 190570.0 221780.0 190260.0 224290.0 296710.0 228900.0 True False 222502.46250284737 246300.22243835262 231179.77030028615 206152.17379756688 205566.77480502328 220395.7887548859 209493.33755866048 223511.99033967953 242834.9434504197 226872.12408150535 0.9807395395254106 1.0856345769031879 1.0189871110706983 0.9086712377387771 0.9060909339887523 0.9714538075013007 0.9233983170334253 0.9851893054052834 1.0703604263130169 1.0 17.791519829502676 -5.020775855041409 23.019629073791947 0.9618954738551121 1.0379680002399299 0.23006720959603189 0.051794557112332364 341.0807715528363 377920.11104036507 0.014420586966018226 0.025424426005166395 9.532880412792791e-06 5.020775855041409 0.07607252638481776 KNSSTDQGS(ph)DEEGSLQK ddPTM_KYSE-520_SHP099_60min_R1 4 KNSSTDQGSDEEGSLQK 17 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 KNSSTDQGS(0.999)DEEGSLQK;KNSSTDQGS(1)DEEGSLQK;KNSSTDQGS(1)DEEGSLQK;KNSSTDQGS(1)DEEGSLQK 257.96 1.3713e-29 2928410000.0 3372090.0 2901190.0 2735930.0 2535940.0 2942540.0 2552170.0 2343610.0 2243730.0 2944840.0 2317110.0 True False 3185033.4456052394 2761812.477625029 2912292.425442775 2776954.9751418387 3174101.1572376234 2536240.9603506085 2580524.970229437 2235947.0243205214 2410131.2893752675 2296582.2080843006 1.3868580164008335 1.2025750560563653 1.2680984879143822 1.2091685485355397 1.3820977738416371 1.104354527968855 1.1236370991404605 0.9735976428144681 1.0494426373640175 1.0 21.13105699628508 -6.627836306520511 1.8496487390008205 1.0182502979607673 1.2785349822816663 0.7437219549534828 0.07027399395010037 0.17263160649680906 1.2043566884038364 0.03261896135781443 0.022783041154455286 2.3559371120609823e-07 6.627836306520511 0.260284684320899 KNSVHEQEAINS(ph)DPELSNCENFQK ddPTM_KYSE-520_SHP099_60min_R1 1 KNSVHEQEAINSDPELSNCENFQK 24 1 Q8IX90-3;Q8IX90 Q8IX90-3 SKA3 Spindle and kinetochore-associated protein 3 1 KNS(0.234)VHEQEAINS(0.766)DPELSNCENFQK 222.71 1.9471000000000002e-21 587760000.0 349670.0 328160.0 300530.0 344490.0 298790.0 320710.0 336620.0 349130.0 461420.0 353310.0 True False 330273.1080501367 312394.7010217981 319902.6446650016 377230.2260253049 322303.07311745256 318708.3299286662 370648.83469460957 347918.94951755425 377637.75945162884 350179.94827102055 0.9431525410887405 0.8920976274176078 0.9135378717270644 1.077246792364447 0.9203927143995327 0.9101272974145367 1.058452480002502 0.9935433231838952 1.078410575237613 1.0 18.417736950103812 -6.7644961380295205 24.99997191744669 1.0320635451701887 0.9442245226105833 0.40497971310281833 0.05333089719856747 89.36766986103241 730888.3224837974 0.022407260686071153 0.015847981894698087 1.7199026354313507e-07 6.7644961380295205 -0.0878390225596054 KNT(ph)FTDWSDNDS(ph)DYEIDDQDLNK ddPTM_KYSE-520_SHP099_60min_R1 1 KNTFTDWSDNDSDYEIDDQDLNK 23 1 A0A3B3ISF0;H0Y9K3;D6R9W6;D6RJB0;Q659C4-4;Q659C4-9;Q659C4-2;Q659C4 A0A3B3ISF0 LARP1B La-related protein 1B 2 KNT(0.349)FT(0.349)DWS(0.301)DNDS(0.998)DY(0.001)EIDDQDLNK 115.27 0.00023308 117280000.0 97026.0 92795.0 77956.0 82700.0 87674.0 91984.0 81123.0 124100.0 103930.0 93138.0 True False 91643.7743634643 88336.98891186541 82981.16849401015 90559.78313533832 94573.44500317791 91409.8937362677 89323.70452418398 123669.5260651578 85058.9318620948 92312.86978026747 0.9927518728602434 0.9569303730036142 0.8989122393392213 0.9810092931884576 1.024488191389687 0.9902183081714485 0.967619192608803 1.3396780574531877 0.9214200800447518 1.0 16.494244174482688 KNT(ph)HENIQLSQSK ddPTM_KYSE-520_SHP099_60min_R1 2 KNTHENIQLSQSK 13 1 Q6ZWT7 Q6ZWT7 MBOAT2 Lysophospholipid acyltransferase 2 1 KNT(1)HENIQLSQSK;KNT(1)HENIQLSQSK 183.23 2.4014000000000002e-08 2777300000.0 1944080.0 2267940.0 1971550.0 3053900.0 2429670.0 2163730.0 2349990.0 2677200.0 3538700.0 1792220.0 True False 1836238.006972602 2158984.758152657 2098639.2675915314 3344141.7378114844 2620871.2060687467 2150225.3584751105 2587549.9228922394 2667913.4180631754 2896161.2833675994 1776342.325126059 1.033718546813488 1.2154102999259695 1.181438531248531 1.8825998179006211 1.475431378849094 1.2104791559940558 1.4566730107658796 1.5019140062847096 1.6304071813196659 1.0 20.760478204599412 -5.035183696870826 24.82721704215578 1.4685019399962798 1.1430290887189112 0.2827349057777532 0.22410986717959658 643.3582640009723 453982.4145782287 0.05963654991627994 0.103357216070633 9.221812825532435e-06 5.035183696870826 -0.3254728512773686 KNTFTAWS(ph)DEES(ph)DYEIDDR ddPTM_KYSE-520_SHP099_60min_R1 3 KNTFTAWSDEESDYEIDDR 19 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 2 KNT(0.012)FT(0.014)AWS(0.974)DEES(0.979)DY(0.021)EIDDR;KNT(0.025)FT(0.025)AWS(0.953)DEES(0.992)DY(0.005)EIDDR;KNTFTAWS(1)DEES(0.994)DY(0.006)EIDDR 140.71 2.0104e-06 1233190000.0 1727160.0 1556330.0 1340270.0 1615970.0 1526370.0 1454710.0 1679430.0 1902620.0 1821490.0 1599160.0 True False 1631350.9917919014 1481561.5707010443 1426665.948707821 1769551.3029409016 1646486.635142697 1445630.6152927254 1849203.174057297 1896020.2552948447 1490753.3320262376 1584992.686527654 1.029248277079314 0.9347434743984826 0.9001088527627912 1.1164413047340755 1.0387976229403062 0.9120739973001148 1.166695083059636 1.19623281003812 0.9405427196589325 1.0 20.596044752821584 -5.2599976554986485 24.98072112793585 1.0594229215566429 0.9527045297770275 0.19545770269249263 0.09067740047238962 200.62949487014453 3476278.264750408 0.025768421490104564 0.04167493339809166 5.495438405147036e-06 5.2599976554986485 -0.1067183917796154 KNTFTAWS(ph)DEES(ph)DYEIDDRDVNK ddPTM_KYSE-520_SHP099_60min_R1 14 KNTFTAWSDEESDYEIDDRDVNK 23 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 2 KNT(0.059)FT(0.059)AWS(0.898)DEES(0.974)DY(0.011)EIDDRDVNK;KNT(0.087)FT(0.07)AWS(0.878)DEES(0.924)DY(0.041)EIDDRDVNK;KNT(0.003)FT(0.003)AWS(0.995)DEES(1)DYEIDDRDVNK;KNT(0.001)FT(0.021)AWS(0.978)DEES(1)DYEIDDRDVNK;KNT(0.129)FT(0.105)AWS(0.766)DEES(0.998)DY(0.002)EIDDRDVNK;KNTFT(0.003)AWS(0.997)DEES(1)DYEIDDRDVNK;KNTFTAWS(1)DEES(0.97)DY(0.03)EIDDRDVNK;KNTFTAWS(1)DEES(1)DYEIDDRDVNK;KNTFTAWS(1)DEES(1)DYEIDDRDVNK;KNTFTAWS(1)DEES(1)DYEIDDRDVNK;KNTFT(0.001)AWS(0.999)DEES(1)DYEIDDRDVNK;KNT(0.001)FT(0.007)AWS(0.992)DEES(0.999)DY(0.001)EIDDRDVNK;KNT(0.011)FT(0.011)AWS(0.978)DEES(0.979)DY(0.021)EIDDRDVNK;KNT(0.003)FT(0.012)AWS(0.985)DEES(0.997)DY(0.003)EIDDRDVNK 206.58 1.8156e-16 59418560000.0 32329540.0 30897320.0 30519270.0 28851390.0 29622170.0 28016340.0 26224150.0 29833350.0 38360160.0 27890140.0 True False 30536155.968859814 29412966.369377192 32486590.976758562 31593417.43111326 31953266.251908027 27841479.629926313 28875143.00504022 29729865.072006226 31394921.9249404 27643055.057800602 1.1046592319484891 1.0640273409677683 1.1752170991531257 1.1429061427925604 1.155923836388378 1.0071780985028902 1.0445713378880652 1.0754912946431638 1.1357254782184814 1.0 24.720413732657477 -6.250333721599888 24.928302720631883 1.0568100774581142 1.1283528635153008 0.4140429239504827 0.04503832905028744 802.3731216358323 1801048.5257403706 0.015612920264164101 0.015475771493614784 5.619093755114038e-07 6.250333721599888 0.07154278605718667 KNTFTAWS(ph)DEESDY(ph)EIDDRDVNK ddPTM_KYSE-520_SHP099_60min_R1 1 KNTFTAWSDEESDYEIDDRDVNK 23 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 2 KNT(0.134)FT(0.039)AWS(0.828)DEES(0.403)DY(0.596)EIDDRDVNK 64.845 0.021102000000000003 1505400000.0 1972000.0 1885400.0 1715000.0 1791100.0 1818400.0 1626400.0 1612200.0 1770700.0 2241300.0 1663700.0 True False 1862609.2289154585 1794822.5539569038 1825551.6440970227 1961325.6054861466 1961497.7347192878 1616249.0343175542 1775176.90955573 1764557.8549844872 1834336.4185751278 1648960.912339014 1.1295654220653353 1.088456700535726 1.1070921271914922 1.1894312295759941 1.1895356160607515 0.9801621264781476 1.076542746569827 1.070102900426852 1.1124195879047023 1.0 20.653125770256604 -6.251734873216483 24.99065493322978 1.0540204815867948 1.1387346283356239 0.5009701205976631 0.04616676917606173 688.5973521769791 1773248.191751562 0.01617821941278204 0.016003195282981934 5.600994249519714e-07 6.251734873216483 0.08471414674882904 KNTFTAWS(ph)DEESDYEIDDR ddPTM_KYSE-520_SHP099_60min_R1 2 KNTFTAWSDEESDYEIDDR 19 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 KNT(0.036)FT(0.008)AWS(0.893)DEES(0.062)DYEIDDR;KNTFTAWS(1)DEESDYEIDDR 274.3 1.0115999999999999e-35 1383610000.0 969860.0 902940.0 797860.0 831600.0 853940.0 902020.0 969380.0 908440.0 1078840.0 851730.0 True False 916059.9324320237 859561.4070594279 849291.3322211364 910635.0139703435 921140.2197460332 896390.1585926707 1067374.390637099 905288.8336714901 882949.8513432352 844184.3348359128 1.0851420651036856 1.0182153015508206 1.0060496234939214 1.0787158401219883 1.0911600485041915 1.0618417347994324 1.264385450654647 1.0723828864313791 1.0459206774014083 1.0 19.68719853251205 -5.474767395263642 4.132380981941912 1.099566248220876 1.0347599155941933 0.09699440995410402 0.06773293924191565 0.4368917083289206 15.654045190554733 0.020180672208012524 0.029577358065524858 3.3514489208631124e-06 5.474767395263642 -0.06480633262668256 KNTFTAWS(ph)DEESDYEIDDRDVNK ddPTM_KYSE-520_SHP099_60min_R1 9 KNTFTAWSDEESDYEIDDRDVNK 23 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 KNTFTAWS(1)DEESDYEIDDRDVNK;KNTFTAWS(1)DEESDYEIDDRDVNK;KNTFT(0.002)AWS(0.997)DEESDYEIDDRDVNK;KNTFTAWS(1)DEESDYEIDDRDVNK;KNTFT(0.003)AWS(0.997)DEESDYEIDDRDVNK;KNT(0.032)FT(0.068)AWS(0.898)DEES(0.001)DYEIDDRDVNK;KNTFTAWS(0.689)DEES(0.311)DYEIDDRDVNK;KNTFT(0.02)AWS(0.98)DEESDYEIDDRDVNK;KNTFTAWS(1)DEESDYEIDDRDVNK 286.74 2.185e-48 30134420000.0 5729820.0 5630948.0 5500530.0 5507440.0 4906934.0 4750884.0 4834060.0 5072640.0 6865440.0 4338720.0 True False 5411975.46248701 5360428.805854732 5855102.964959169 6030865.441727789 5293081.789164676 4721231.970705061 5322733.9606791735 5055044.195803077 5618849.159658429 4300282.316273077 1.2585163169420475 1.24652950936962 1.361562459004693 1.4024347701326165 1.2308684406915935 1.097888841585826 1.2377638418149772 1.1755144951004353 1.3066233206121485 1.0 22.0359999460964 -5.991397133191236 23.31204639208711 1.1775226123253608 1.3155328437078198 0.4044927104018543 0.08708551042727188 94.74780594738183 256742.46574056204 0.026680699728709838 0.03019175664866726 1.0200063297058274e-06 5.991397133191236 0.13801023138245894 KNTQIELQS(ph)SPDVQNSLLEDK ddPTM_KYSE-520_SHP099_60min_R1 1 KNTQIELQSSPDVQNSLLEDK 21 1 Q9UK61;Q9UK61-2;A0A087X0F1;Q9UK61-4 Q9UK61 FAM208A Protein FAM208A 1 KNTQIELQS(0.577)S(0.423)PDVQNSLLEDK 103.95 0.00048877 895540000.0 472120.0 452200.0 385310.0 390030.0 413320.0 387880.0 357900.0 457750.0 525190.0 472300.0 True False 445930.5624521128 430475.6332339619 410147.6991177973 427098.3339332048 445845.93253089243 385459.09704321995 394080.024767396 456162.1720896536 429828.7349625086 468115.78944383963 0.9526073943840161 0.9195922097509307 0.8761671970199655 0.9123775432583315 0.9524266059484863 0.8234268224559939 0.8418430517705795 0.9744644004245447 0.9182102903924279 1.0 18.836505902097553 -7.990024161219203 1.3916931870617082 0.9955821464078587 0.899907417611628 0.28396730489878597 0.045423259655959065 0.5822144002741731 2.5471021439696626 0.04485076134924203 0.013534313470436416 1.0232360647359658e-08 7.990024161219203 -0.09567472879623073 KNY(ph)MS(ph)NPSY(ph)NY(ph)EIVNRASLACGPMVK ddPTM_KYSE-520_SHP099_60min_R1 2 KNYMSNPSYNYEIVNRASLACGPMVK 26 2 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7;A0A2R8Y5T0;H0YJ21 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 4 KNY(0.712)MS(0.633)NPS(0.668)Y(0.719)NY(0.719)EIVNRAS(0.548)LACGPMVK;KNY(0.766)MS(0.719)NPS(0.73)Y(0.766)NY(0.766)EIVNRAS(0.252)LACGPMVK 41.133 0.063889 590980000.0 70165.0 91573.0 67616.0 129047.0 71464.0 70312.0 77777.0 80497.0 91766.0 69063.0 True False 66272.80757954014 87173.69562612467 71974.63554942507 141311.58808060468 77087.8102254614 69873.15672708793 85639.45819037086 80217.774695141 75103.60763260847 68451.155550201 0.9681766077847539 1.2735167861730667 1.051474368415008 2.0644149385757116 1.1261725182846098 1.0207739542956884 1.25110317717813 1.171898035180875 1.0971853875794495 1.0 16.06278727592631 -5.933943998493842 24.999999999801805 1.1217645388781856 1.349268784485967 0.13473827755148915 0.2821271249475391 123.9559067931702 46911.54854453947 0.08899109486408317 0.10090640926247284 1.1642761510840365e-06 5.933943998493842 0.22750424560778137 KPAATS(ph)PLS(ph)PMANGGR ddPTM_KYSE-520_SHP099_60min_R1 1 KPAATSPLSPMANGGR 16 1 Q86UU1-3;Q86UU1-2;Q86UU1;A0A087WXY7 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 2 KPAAT(0.449)S(0.554)PLS(0.998)PMANGGR 54.117 0.044979000000000005 474220000.0 385950.0 395800.0 427430.0 441560.0 428420.0 516330.0 561470.0 595110.0 688810.0 649450.0 True False 364540.5841277497 376785.17389208835 454982.82171218004 483525.7296401449 462134.21662364557 513107.3929471111 618228.8670191385 593045.7023097179 563739.4674870538 643696.3782644537 0.5663238079894607 0.5853461144336148 0.7068283076858585 0.7511704989607617 0.7179381960632752 0.7971264252419143 0.960435521924201 0.9213127840002748 0.8757847434329501 1.0 19.296020826033214 -5.242922303102508 0.32754175872372626 1.0016208546413754 0.38854912359108423 0.904938303905027 0.04396162125971368 1.1191165006616426 0.15699903889276126 0.053537303530374065 0.2600500312251123 5.715808854707621e-06 5.242922303102508 -0.6130717310502911 KPAAVLKPSDWEK ddPTM_KYSE-520_SHP099_60min_R1 2 KPAAVLKPSDWEK 13 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 0 ; 129.93 2.7281e-05 1410750000.0 2530100.0 2190250.0 1543290.0 1248010.0 2174700.0 2149060.0 1528730.0 2026950.0 1850710.0 1937960.0 False True 2389750.3093706933 2085027.102367723 1642772.9427513052 1366620.4951721113 2345836.517649598 2135646.9193866677 1683268.9473670314 2019918.9835436845 1514667.7166024982 1920791.182110065 1.2441489380149373 1.0855043076974344 0.855258477887562 0.7114883220521789 1.2212865924720686 1.111857936082659 0.8763414592094775 1.051607797014522 0.7885644887949641 1.0 20.873269254954703 -4.479924255455929 3.924787022580152 0.9578951464535043 1.2272886911270133 0.2829872124642667 0.14542638403547115 0.3087679820799331 9.623651305666243 0.03856402725702466 0.16568431467049688 3.311888785211821e-05 4.479924255455929 0.26939354467350907 KPAFNLSAFGTLS(ph)PSLGNSSILK ddPTM_KYSE-520_SHP099_60min_R1 3 KPAFNLSAFGTLSPSLGNSSILK 23 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 KPAFNLSAFGTLS(0.978)PS(0.022)LGNSSILK;KPAFNLSAFGT(0.005)LS(0.994)PSLGNSSILK;KPAFNLSAFGTLS(0.983)PS(0.017)LGNSSILK 217.67 4.0630999999999995e-21 549492000.0 513910.0 827240.0 745740.0 528857.0 640990.0 849990.0 471545.0 617790.0 665620.0 429097.0 True False 485402.38784581394 787498.1486874452 793811.5936261868 579119.4102733447 691432.2662657918 844684.8971222192 519213.370435712 615647.0306832708 544760.186914727 425295.53441241424 1.1413296133392112 1.8516492296949412 1.8664940715234928 1.3616870232918215 1.6257689308237635 1.986112782230904 1.2208295841926815 1.4475746413228745 1.280897970554439 1.0 18.698106181234753 -7.744714960296322 0.8967621268250431 1.0174167247852646 1.631213224962772 0.3501729464642186 0.25894181548979484 0.599388567461116 1.0269830386165744 0.2430214049804724 0.08897341362640301 1.8000519523208548e-08 7.744714960296322 0.6137965001775074 KPALGFYDT(ph)SEENYQALDADFR ddPTM_KYSE-520_SHP099_60min_R1 2 KPALGFYDTSEENYQALDADFR 22 1 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 KPALGFYDT(0.998)S(0.002)EENYQALDADFR;KPALGFYDT(0.973)S(0.027)EENYQALDADFR 245.69 7.5586e-27 397850000.0 122836.0 130985.0 136137.0 118385.0 115855.0 122294.0 128546.0 159220.0 178283.0 147845.0 True False 116022.04221250476 124692.28398750664 144912.6088469016 129636.27480625178 124972.12937522172 121530.71778334395 141540.6841680627 158667.7029822275 145911.30134869492 146535.2083216694 0.7917690467796442 0.8509373645805732 0.9889268968642272 0.8846766336297716 0.8528471130357074 0.8293618931264874 0.9659158763903152 1.0827957649190032 0.9957422725901826 1.0 17.16088782009653 -6.958618264826814 4.889291890685184 1.0292675202136503 0.8721562069985833 0.6535156807264246 0.05281260731722899 0.12607528408217628 6.9762927654822 0.02457472343971352 0.015905679060958706 1.0999722657500852e-07 6.958618264826814 -0.157111313215067 KPALPVS(ph)PAAR ddPTM_KYSE-520_SHP099_60min_R1 6 KPALPVSPAAR 11 1 A0A087X0M4;Q9BWU0;A0A087WWF4 A0A087X0M4 SLC4A1AP Kanadaptin 1 KPALPVS(1)PAAR;KPALPVS(1)PAAR;KPALPVS(1)PAAR;KPALPVS(1)PAAR;KPALPVS(1)PAAR;KPALPVS(1)PAAR 115.8 0.00017138 14304400000.0 14835000.0 12817230.0 12301930.0 11128990.0 11701070.0 13143380.0 12165740.0 13100690.0 14256200.0 12932550.0 True False 14012072.977160681 12201471.031745534 13094932.091583943 12186685.86354714 12621877.639018819 13061347.29013073 13395571.72538054 13055246.764114028 11667633.449556392 12817977.66837164 1.0931578552937777 0.9519029715469597 1.0216067175632306 0.9507495003379346 0.9847011724917654 1.0189865849399633 1.0450612469417944 1.018510649798357 0.9102554046685756 1.0 23.61166532570336 -4.246515277807091 24.4341668923625 0.9920293326345851 1.0931579542107268 0.38829563844087056 0.03903014072742353 2168.7087281309036 3550591.885974421 0.00974118856465454 0.20786338555091685 5.668716295066642e-05 4.246515277807091 0.10112862157614166 KPAQEETEETS(ph)SQES(ph)AEED ddPTM_KYSE-520_SHP099_60min_R1 1 KPAQEETEETSSQESAEED 19 1 P52926 P52926 HMGA2 High mobility group protein HMGI-C 2 KPAQEETEET(0.014)S(0.954)S(0.032)QES(1)AEED 168.56 5.9119e-09 113860000.0 115340.0 100050.0 89628.0 82764.0 95179.0 83418.0 89141.0 89993.0 121750.0 99517.0 True False 108941.86027541028 95243.44782188835 95405.56428987051 90629.86567609613 102669.04580556907 82897.35731966412 98152.24221232304 89680.83528752404 99643.2690677384 98635.35680305444 1.1044909635490534 0.9656116316592362 0.9672552255310145 0.9188375103367558 1.0408949603190336 0.8404426161826085 0.995102014060779 0.9092159058803839 1.010218569662565 1.0 16.589817266933412 -4.254601293803041 4.033162638716969 0.9558431030539507 1.1185754271214525 0.3754156351102029 0.05538613800670097 0.23646419266503518 8.116021924211271 0.01280276129376168 0.11346087973144535 5.564148422597486e-05 4.254601293803041 0.16273232406750182 KPAT(ph)PAEDDEDDDIDLFGS(ph)DNEEEDK ddPTM_KYSE-520_SHP099_60min_R1 3 KPATPAEDDEDDDIDLFGSDNEEEDK 26 1 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;A0A087X1X7;E9PK01;E9PQZ1;E9PI39;E9PQ49;E9PL71;H0YE72 P29692-2 EEF1D Elongation factor 1-delta 2 KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDK;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDK;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDK 229.34 3.2499999999999997e-22 1435910000.0 1119420.0 931850.0 819270.0 1011660.0 967450.0 1055890.0 1142620.0 1062380.0 1039940.0 1019160.0 True False 1057323.5410915536 887082.5272646332 872081.455078348 1107807.8622333298 1043582.8109624807 1049299.798847491 1258127.1804965665 1058694.851741357 851113.1107540354 1010131.0352944814 1.0467191920138503 0.8781855979764287 0.8633349779458186 1.0966971843513083 1.0331162735320247 1.0387759233054261 1.2455088860127808 1.0480767492038474 0.8425769340963889 1.0 19.946111022407685 -5.266205348091071 24.986606322989328 1.053322237970434 0.9242904891332774 0.19829106854040623 0.1037069716554921 589.5796729103387 3090998.959104019 0.029928084372277158 0.04607191664344344 5.417446759107935e-06 5.266205348091071 -0.1290317488371565 KPAT(ph)PAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLR ddPTM_KYSE-520_SHP099_60min_R1 14 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR 32 2 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;A0A087X1X7;E9PK01;E9PQZ1;E9PI39;E9PQ49;E9PL71;H0YE72 P29692-2 EEF1D Elongation factor 1-delta 2 KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPAT(1)PAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR 277.81 1.5707000000000002e-41 207453325000.0 4180687.0 4153595.0 3692153.0 3708200.0 3649561.0 3963549.0 3590410.0 3949332.0 4611382.0 3876554.0 True False 3948775.95811708 3954050.0615267977 3930155.0900336686 4060626.21308902 3936760.6875384115 3938811.020487154 3953363.681824827 3935632.6890730215 3774071.272280294 3842210.747473374 1.0277353892453147 1.0291080634051553 1.0228889949928246 1.056846300208617 1.0246082128959775 1.0251418465468882 1.02892942153799 1.0243146323145031 0.9822655549964592 1.0 21.8735052231522 -7.676203055781912 5.3437473662729795 0.9914127763299465 1.030597349245352 0.7086857098908521 0.009997511608505061 0.10313819496859372 4.725483304941999 0.00731205189030248 0.0025696405560289132 2.1076424845029134e-08 7.676203055781912 0.03918457291540545 KPATPAEDDEDDDIDLFGS(ph)DNEEEDK ddPTM_KYSE-520_SHP099_60min_R1 13 KPATPAEDDEDDDIDLFGSDNEEEDK 26 1 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;A0A087X1X7;E9PK01;E9PQZ1;E9PI39;E9PQ49;E9PL71;H0YE72 P29692-2 EEF1D Elongation factor 1-delta 1 KPATPAEDDEDDDIDLFGS(1)DNEEEDK;KPATPAEDDEDDDIDLFGS(1)DNEEEDK;KPATPAEDDEDDDIDLFGS(1)DNEEEDK;KPATPAEDDEDDDIDLFGS(1)DNEEEDK;KPATPAEDDEDDDIDLFGS(1)DNEEEDK;KPATPAEDDEDDDIDLFGS(1)DNEEEDK;KPATPAEDDEDDDIDLFGS(1)DNEEEDK;KPATPAEDDEDDDIDLFGS(1)DNEEEDK;KPATPAEDDEDDDIDLFGS(1)DNEEEDK;KPATPAEDDEDDDIDLFGS(1)DNEEEDK;KPATPAEDDEDDDIDLFGS(1)DNEEEDK;KPATPAEDDEDDDIDLFGS(1)DNEEEDK;KPATPAEDDEDDDIDLFGS(1)DNEEEDK 364.66 2.2284999999999997e-86 73250910000.0 14268530.0 11065440.0 10148260.0 12059480.0 12227840.0 12320570.0 14543520.0 13457350.0 12308380.0 12243090.0 True False 13477026.19729063 10533839.652835933 10802433.0773901 13205609.353385132 13190101.441107506 12243672.752546607 16013720.932677047 13410669.593819099 10073488.461010005 12134625.747579874 1.110625616119927 0.8680811317923669 0.8902155947862285 1.0882584785129326 1.0869804900030093 1.0089864333054095 1.3196715964537116 1.1051572477621503 0.8301441404584775 1.0 23.53262627822702 -5.275046049559293 23.563899158996428 1.0765996343228026 0.9474848170620965 0.11706948549914342 0.1294303692595017 649.0001976477305 1123931.3152041272 0.037114101165562484 0.055446842607575056 5.308281559297033e-06 5.275046049559293 -0.12911481726070606 KPATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLR ddPTM_KYSE-520_SHP099_60min_R1 66 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLR 32 2 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;A0A087X1X7;E9PK01;E9PQZ1;E9PI39;E9PQ49;E9PL71;H0YE72 P29692-2 EEF1D Elongation factor 1-delta 1 KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLR 421.64 1.5539999999999996e-132 2082266647000.0 57217464.8 51966147.6 52357629.7 55125146.1 52136278.5 53854084.9 48238242.599999994 51275822.0 63556505.0 55289302.0 True False 54043497.96735572 49469615.86651816 55732686.28563151 60364223.41136449 56239107.003103726 53517961.57998061 53114634.921887815 51097958.14134883 52016245.82110934 54799481.79870603 0.9862045441574201 0.9027387530457683 1.0170294399927613 1.101547340047837 1.0262707813494631 0.9766143734089894 0.9692543282980826 0.9324533091215362 0.9492105420299355 1.0 25.707658914879605 -6.54791526415159 3.2218318661313186 0.9572548721555487 1.0065864939935132 0.15289708893898968 0.04839955248305101 0.5065393971167869 10.922759898556277 0.021971710816120562 0.01719929754038205 2.831944486839631e-07 6.54791526415159 0.04933162183796447 KPATPAEDDEDDDIDLFGS(ph)DNEEEDKEAAQLREER ddPTM_KYSE-520_SHP099_60min_R1 4 KPATPAEDDEDDDIDLFGSDNEEEDKEAAQLREER 35 3 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;A0A087X1X7;E9PK01;E9PQZ1;E9PI39;E9PQ49;E9PL71;H0YE72 P29692-2 EEF1D Elongation factor 1-delta 1 KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER;KPATPAEDDEDDDIDLFGS(1)DNEEEDKEAAQLREER 319.24 1.1540999999999997e-67 6035010000.0 1304060.0 2244600.0 2566440.0 905011.0 1303000.0 1015196.0 690474.0 706471.0 3203030.0 946858.0 True False 1231721.1922208385 2136766.046786713 2731876.8288491885 991022.973338522 1405538.6869441448 1008859.7851961644 760273.8502968502 704020.4169925704 2621440.4938155035 938469.5747643772 1.3124785558765593 2.276862355738271 2.9109913654207538 1.0559990435356836 1.4976923330700787 1.0750053196444436 0.810120935979979 0.7501792662477414 2.7933143112004157 1.0 19.839950447997946 -5.284496249355031 24.93682128928817 1.2533304319973058 2.1777860357801138 0.2746791569959255 0.6566535160357351 929.7658282511796 1005572.5451000584 0.18412390366177872 0.273300255808332 5.19402159137759e-06 5.284496249355031 0.924455603782808 KPCNSQPSELSSETSGIARPEEGRPVVS(ph)GTGNDITTPPNK ddPTM_KYSE-520_SHP099_60min_R1 1 KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDITTPPNK 40 3 P27816-6;P27816 P27816-6 MAP4 Microtubule-associated protein 4 1 KPCNSQPSELS(0.012)S(0.012)ET(0.012)S(0.013)GIARPEEGRPVVS(0.354)GT(0.318)GNDIT(0.235)T(0.042)PPNK 50.706 0.052725 12567000000.0 633120.0 506820.0 407230.0 480030.0 381420.0 478200.0 385940.0 587830.0 526650.0 439430.0 True False 597999.5715065702 482471.606447671 433480.6973910374 525651.9068737179 411435.5840170643 475215.3764207163 424954.5816114237 585790.9549305531 431023.63576611417 435536.99207136664 1.3730167181955066 1.1077626360807804 0.9952787140523938 1.2069053064213318 0.944662776083201 1.0911022142129503 0.9757026138936806 1.3449855364629189 0.9896372606979089 1.0 18.73243573289688 -4.270232633937721 4.396601849371662 1.0773446309620258 1.3918425940112482 0.37355496495832574 0.11706610763805012 0.20203101728187792 9.571399818804307 0.02789522892788953 0.1955512392418974 5.3674420725228204e-05 4.270232633937721 0.3144979630492224 KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDIT(ph)TPPNK ddPTM_KYSE-520_SHP099_60min_R1 4 KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDITTPPNK 40 3 P27816-6;P27816 P27816-6 MAP4 Microtubule-associated protein 4 1 KPCNSQPSELSSETSGIARPEEGRPVVS(0.006)GT(0.006)GNDIT(0.816)T(0.172)PPNK;KPCNSQPSELSSETSGIARPEEGRPVVS(0.001)GT(0.001)GNDIT(0.499)T(0.499)PPNK;KPCNSQPSELSSETSGIARPEEGRPVVSGT(0.001)GNDIT(0.499)T(0.499)PPNK;KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDIT(0.962)T(0.038)PPNK 167.51 1.2779e-10 45831200000.0 4449080.0 3797940.0 3166360.0 3749170.0 3349450.0 3985200.0 3470450.0 4603020.0 4782440.0 4324500.0 True False 4202280.6633789055 3615481.261575839 3370468.6319551254 4105489.989570939 3613032.659236428 3960326.8885651142 3821276.9543280434 4587053.197972949 3914069.4515015557 4286188.294410092 0.9804237179359069 0.843518999454838 0.7863557082526639 0.9578417249949532 0.8429477220934106 0.9239740805904502 0.8915326840194187 1.0701940472272846 0.9131818722490933 1.0 22.031263799050414 -7.152749957012377 8.459270608326657 0.9935442777354313 0.8855235324333653 0.35689003259930485 0.06443098361845717 0.3223668302783408 22.616039881412114 0.029410236483969003 0.016947780909014904 7.034772269870541e-08 7.152749957012377 -0.10802074530206596 KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDITT(ph)PPNK ddPTM_KYSE-520_SHP099_60min_R1 3 KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDITTPPNK 40 3 P27816-6;P27816 P27816-6 MAP4 Microtubule-associated protein 4 1 KPCNSQPSELS(0.004)S(0.004)ET(0.017)S(0.017)GIARPEEGRPVVS(0.081)GT(0.081)GNDIT(0.378)T(0.418)PPNK;KPCNSQPSELSSETSGIARPEEGRPVVS(0.001)GT(0.001)GNDIT(0.208)T(0.79)PPNK;KPCNSQPSELSSETSGIARPEEGRPVVSGTGNDIT(0.154)T(0.845)PPNK 98.885 0.00029562 16703400000.0 1358570.0 1263000.0 963820.0 1015110.0 975040.0 1195130.0 1112120.0 1441420.0 1390670.0 1285880.0 True False 1283207.4138578488 1202323.5841983508 1025949.3793665244 1111585.7491960484 1051770.1007812866 1187670.750359035 1224543.9428452533 1436420.0504499585 1138159.383937836 1274488.103599501 1.0068414214567574 0.9433776437792255 0.8049893729639094 0.8721821302659694 0.8252490531773515 0.9318806091675002 0.9608123758760934 1.1270564600745332 0.8930325679175539 1.0 20.281486476259726 -6.772165999285958 2.8861087735756974 1.0113598124092265 0.8880406783297248 0.2964686121747605 0.07579122958367632 0.30495266279321936 5.207693781341165 0.03451304448518835 0.023306764089825627 1.6897949221328433e-07 6.772165999285958 -0.12331913407950168 KPDS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 6 KPDSPPK 7 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KPDS(1)PPK;KPDS(1)PPK;KPDS(1)PPK;KPDS(1)PPK;KPDS(1)PPK;KPDS(1)PPK 68.557 0.019693000000000002 12482710000.0 18766300.0 13559700.0 10886900.0 13765200.0 14481400.0 17450100.0 17440700.0 15220500.0 15780900.0 18569300.0 True False 17725295.929308403 12908271.658475345 11588686.993655894 15073440.46934171 15621003.792105079 17341187.453114048 19203776.160829037 15167703.6379914 12915486.364115573 18404790.448696796 0.963080562026366 0.7013539053572518 0.6296560140665152 0.8189954952955756 0.8487466258118233 0.9422105348850598 1.0434118342373637 0.8241171601638851 0.7017459068668772 1.0 24.133577987943454 -5.737998062142579 2.815970608231795 0.8981428524569209 0.7560157591268194 0.19232958838252456 0.11901856232108116 0.4313262649956882 7.007506188118582 0.03994952516141664 0.05081666588717231 1.8281083732932963e-06 5.737998062142579 -0.14212709333010154 KPDS(ph)PPKVLEPENK ddPTM_KYSE-520_SHP099_60min_R1 1 KPDSPPKVLEPENK 14 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 KPDS(1)PPKVLEPENK 56.951 0.038675 499030000.0 836410.0 746240.0 699530.0 595220.0 662350.0 685020.0 597520.0 640900.0 883550.0 687870.0 True False 790012.6699580029 710389.5102709238 744622.8230875742 651789.5298405823 714473.1767440168 680744.5360847329 657923.1528332328 638676.867487185 723119.592482959 681776.0069547626 1.158756925880529 1.0419690675885867 1.0921810323210475 0.9560171129398956 1.047958815587102 0.9984870824735577 0.9650136498230972 0.9367840184636517 1.0606410098132708 1.0 19.378938303517998 -1.0000000000004055 0.5242251562628433 0.9880711617233169 7.231224328302496 0.5594024097825949 0.0429921661987707 84.29465829721983 0.8374933448774179 0.021583290338223024 586.1055649680675 0.09999999999990664 1.0000000000004055 6.243153166579179 KPDSWDGNREPGPGHEHFR ddPTM_KYSE-520_SHP099_60min_R1 3 KPDSWDGNREPGPGHEHFR 19 2 Q9C0J8 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 0 ;; 154.6 9.460799999999999e-07 1931500000.0 1193034.0 1218310.0 1505528.0 1675696.0 1268724.0 1093111.0 1402556.0 1347197.0 1459202.0 601393.0 False True 1126854.025765682 1159780.5588794085 1602576.7438099713 1834953.6440236275 1368565.3607479045 1086288.4887800638 1544340.048107458 1342523.888045145 1194247.700288968 596065.1258966746 1.8904880973711211 1.9457279221540158 2.6885933670405193 3.0784448952004433 2.2959997176300826 1.8224325523925509 2.590891466405238 2.252310745450097 2.0035523777581075 1.0 19.18511044216306 -8.250601102155361 1.7499557565502966 1.0006122279182785 2.3422211813909817 0.5366538362194697 0.3689666360599632 0.7984815908138311 4.047037042166429 0.3840375247087508 0.10869921964923929 5.6156353321611396e-09 8.250601102155361 1.3416089534727031 KPDWDLKR ddPTM_KYSE-520_SHP099_60min_R1 2 KPDWDLKR 8 2 J3KR35;Q8WUD4 J3KR35 CCDC12 Coiled-coil domain-containing protein 12 0 ; 95.50200000000001 0.0023087 1100700000.0 1944200.0 1618730.0 1305400.0 1042060.0 1815460.0 1623080.0 1268670.0 1266370.0 1377670.0 1165770.0 False True 1836351.3503333863 1540963.781036733 1389548.1727138492 1141097.0690932372 1958326.3734455975 1612949.7556690448 1396919.5446260169 1261977.2580429798 1127519.8562345062 1155442.1847553358 1.5893061328051068 1.3336571932095687 1.2026115984401982 0.9875847395470192 1.69487179824603 1.395958860555698 1.208991296195243 1.0922028593842648 0.9758340755693093 1.0 20.140013642324412 -7.185297492679385 2.1729751775198243 1.0027140291294816 1.3537235570652366 0.4155062182568183 0.1835906874507307 0.3673079560054834 3.310794596006307 0.12661823001301026 0.057006599003211235 6.526833099748546e-08 7.185297492679385 0.351009527935755 KPEDRPNTSEILR ddPTM_KYSE-520_SHP099_60min_R1 1 KPEDRPNTSEILR 13 2 P19525-2;P19525 P19525-2 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase 0 92.939 0.0015642000000000002 998100000.0 404080.0 385100.0 227370.0 186700.0 394740.0 317660.0 257140.0 332270.0 312010.0 273780.0 False True 381664.87688649027 366599.2179531153 242026.63400486275 204443.91186659803 425803.79223663127 315677.3661100063 283134.22064455994 331117.4329224014 255356.84913203304 271354.52219761687 1.406517473139949 1.3509972672802388 0.891920400090492 0.753419954865206 1.5691789058394061 1.1633392491616956 1.0434107320251857 1.2202392288906154 0.9410451208403545 1.0 18.049819426226435 -4.628850413745003 7.806248668624158 1.0895727263572024 1.3921464146429565 0.2537951324382173 0.20908826396811833 0.31992996062056833 20.716741429072908 0.0550953447471586 0.1470885141531104 2.3504422562099448e-05 4.628850413745003 0.30257368828575415 KPEDS(ph)PSDDDVLIVYELTPTAEQK ddPTM_KYSE-520_SHP099_60min_R1 2 KPEDSPSDDDVLIVYELTPTAEQK 24 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KPEDS(0.942)PS(0.058)DDDVLIVYELTPTAEQK;KPEDS(0.792)PS(0.208)DDDVLIVYELTPTAEQK 196.06 1.8007000000000002e-15 444450000.0 1016030.0 939140.0 829850.0 905620.0 868590.0 923900.0 864490.0 885460.0 1149510.0 947790.0 True False 959668.7904944103 894022.3047221199 883343.4588069466 991689.8525154177 936943.0913989367 918133.597396695 951881.0858093483 882388.5459279176 940787.9607889608 939393.3179694623 1.0215835818044505 0.9517017926576127 0.9403339814214671 1.0556705413436371 0.997391692570454 0.9773686695805747 1.0132934390749966 0.9393174605874749 1.0014846207576962 1.0 19.84136980598588 KPEDSPS(ph)DDDVLIVYELTPTAEQK ddPTM_KYSE-520_SHP099_60min_R1 2 KPEDSPSDDDVLIVYELTPTAEQK 24 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KPEDS(0.328)PS(0.672)DDDVLIVYELTPTAEQK;KPEDS(0.288)PS(0.712)DDDVLIVYELTPTAEQK 205.37 3.6361e-16 380930000.0 893530.0 799170.0 760120.0 716710.0 720070.0 788180.0 719140.0 795360.0 959510.0 764540.0 True False 843964.1096921045 760776.6736213735 809118.5514350007 784825.9029132813 776735.4123621403 783260.676259473 791837.6893300499 792601.0817984192 785287.1712787313 757766.7704031195 1.1137518068298633 1.003972070742364 1.0677672643319565 1.0357090513427591 1.0250322958196356 1.0336434729683266 1.0449622763331325 1.0459697003825708 1.0363177721041679 1.0 19.531394350591494 -4.246527725932692 24.770167683654606 1.0354126809475523 1.1137518699954692 0.6190441699232186 0.01898374215078678 1553.4004630979994 2580351.326834446 0.004408826084214967 0.09698190828732488 5.668553815725795e-05 4.246527725932692 0.07833918904791681 KPEDWDEEMDGEWEPPVIQNPEYK ddPTM_KYSE-520_SHP099_60min_R1 16 KPEDWDEEMDGEWEPPVIQNPEYK 24 1 P27797;K7EJB9;K7EL50 P27797 CALR Calreticulin 0 ;;;;;;;;;;;;;;; 255.94 2.5730999999999996e-29 17989380000.0 11886840.0 10338990.0 7972810.0 6438377.0 10959490.0 11307290.0 8798380.0 8643010.0 9331830.0 9632690.0 False True 11227453.289371941 9842289.40125963 8486750.089547029 7050278.414311372 11821939.512031829 11236717.008883746 9687806.114313943 8613029.41560369 7637404.908290693 9547351.86071941 1.1759756478196806 1.0308920782268096 0.8889114189311481 0.7384538160071666 1.2382427802489122 1.1769459398594992 1.0147113310207412 0.9021380526510397 0.7999500824635157 1.0 23.186669199101157 -7.257193916322246 4.7634757681976625 0.8860911819581799 1.0340412061174176 0.15620190886308394 0.14536806472441713 0.380957455655193 25.285513848992373 0.08375899509394502 0.04277169320833756 5.5310308865682544e-08 7.257193916322246 0.14795002415923764 KPEDWDERPK ddPTM_KYSE-520_SHP099_60min_R1 4 KPEDWDERPK 10 2 P27824;P27824-2;P27824-3;D6RGY2 P27824 CANX Calnexin 0 ;;; 146.16 0.00012685 12655000000.0 16845900.0 17908400.0 11235110.0 16208900.0 21731100.0 20675600.0 18822000.0 24091200.0 21303900.0 14586600.0 False True 15911424.345530925 17048053.58294358 11959343.16741159 17749388.982616507 23441213.936954632 20546555.911175575 20724711.445017945 24007633.250128336 17435648.78761553 14457374.072203068 1.1005749914241711 1.1791943334800727 0.8272140644410386 1.2277048995185742 1.6214019101867627 1.4211817311056554 1.4335045452593618 1.6605804851025734 1.2060038496990084 1.0 23.78530220010784 -5.524616151590942 23.356741158262427 1.4269269742078456 1.0462552531621359 0.38470991462633086 0.19803203775753161 21.462538310878383 288520.5401440175 0.05504392318161721 0.07168648757291464 2.988022396716421e-06 5.524616151590942 -0.3806717210457098 KPEEES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 12 KPEEESPR 8 1 P49321-4;P49321;P49321-3;Q5T624;P49321-2;H0YF33 P49321-4 NASP Nuclear autoantigenic sperm protein 1 KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR;KPEEES(1)PR 121.29 0.00071128 34176140000.0 45226490.0 34069440.0 29714650.0 37251860.0 36966680.0 40650730.0 43514390.0 38856200.0 38131950.0 44432200.0 True False 42717686.4429274 32432692.963127974 31630103.884121016 40792265.574219845 39875747.40436245 40397013.715447314 47913249.20072116 38721416.91130522 31208149.108234454 44038565.27572857 0.9700063154979947 0.736461162166946 0.7182364749188058 0.9262850712509954 0.905473353972764 0.9173099410146256 1.0879838818711036 0.8792615442593938 0.7086549916610141 1.0 25.39226413258457 -5.289044421776067 23.939189919577213 0.9193723161987628 0.8010572960419392 0.1718707407689336 0.10989189946092921 705.5294205561556 611835.9260888215 0.03180278776352342 0.04718733892537304 5.139910753578913e-06 5.289044421776067 -0.1183150201568236 KPEEES(ph)PRK ddPTM_KYSE-520_SHP099_60min_R1 9 KPEEESPRK 9 2 P49321-4;P49321;P49321-3;Q5T624;P49321-2;H0YF33 P49321-4 NASP Nuclear autoantigenic sperm protein 1 KPEEES(1)PRK;KPEEES(1)PRK;KPEEES(1)PRK;KPEEES(1)PRK;KPEEES(1)PRK;KPEEES(1)PRK;KPEEES(1)PRK;KPEEES(1)PRK;KPEEES(1)PRK 148.96 0.00022104 13675170000.0 9278270.0 7527860.0 5851750.0 7379230.0 8325710.0 8941540.0 8498280.0 8997150.0 8436000.0 10493160.0 True False 8763585.867327314 7166210.306051767 6228963.168131045 8080549.800553606 8980896.010190114 8885732.532164155 9357369.07762019 8965940.986600602 6904235.054254126 10400198.76595495 0.8426363826828879 0.6890455141598213 0.5989273194010056 0.7769610929942306 0.8635311893835218 0.8543810298368142 0.8997298309578021 0.862093233828435 0.6638560675258571 1.0 23.310107765262256 -5.546178105911833 5.057778637590559 0.8509014426761949 0.7046125778751113 0.3253153856916894 0.09513913343904108 0.21477195816664493 14.855061409536585 0.027983136607328474 0.037694159662485224 2.843294821685538e-06 5.546178105911833 -0.1462888648010836 KPEEES(ph)PRKDDAK ddPTM_KYSE-520_SHP099_60min_R1 12 KPEEESPRKDDAK 13 3 P49321-4;P49321;P49321-3;Q5T624;P49321-2;H0YF33 P49321-4 NASP Nuclear autoantigenic sperm protein 1 KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK;KPEEES(1)PRKDDAK 252.12 1.1555e-15 370498409000.0 157706280.0 133920540.0 141294450.0 134678600.0 145181140.0 148902260.0 136934160.0 137745330.0 171088740.0 125399890.0 True False 148957998.26872516 127486796.2395713 150402516.3261131 147478413.6514025 156606069.75031006 147972905.76285112 150776801.24141532 137267523.60023168 140023337.6121587 124288944.53423825 1.1984814806090114 1.025729172593079 1.2101037376231099 1.1865770861926999 1.2600160886165488 1.190555654948768 1.2131151471793244 1.1044226348097934 1.1265952747195953 1.0 26.889122733888595 -8.080588667375169 1.2103862774904202 1.0025689866851863 1.1800661599057494 0.44944385362779304 0.06008627634091723 0.553186218010881 1.774220719330316 0.059735508894483806 0.01858809323772073 8.306371150466113e-09 8.080588667375169 0.17749717322056302 KPEENPASK ddPTM_KYSE-520_SHP099_60min_R1 2 KPEENPASK 9 1 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ; 90.65299999999999 0.0098991 817730000.0 1459750.0 1399100.0 1036180.0 848390.0 1401330.0 1638580.0 1095260.0 1306890.0 1296610.0 1680480.0 False True 1378774.7575605204 1331885.1359080842 1102973.820746619 929020.7305222462 1511606.6985229752 1628353.0144196087 1205979.5695075083 1302356.7036204184 1061178.3088781934 1665592.2545936583 0.8277984925529625 0.7996465715031882 0.6622111850632393 0.5577720044987194 0.907549068119166 0.9776420429001488 0.724054501443225 0.7819180835096669 0.6371177014971656 1.0 20.667603834209288 -5.790396635312343 24.99972662082607 0.8284229069391957 0.7145812924489763 0.195350665918531 0.12450111288809579 415.0255308855871 358302.73154734133 0.04076479636489655 0.046230319592103754 1.620329596161932e-06 5.790396635312343 -0.11384161449021946 KPES(ph)PYGNLCDAPDS(ph)PRPVK ddPTM_KYSE-520_SHP099_60min_R1 4 KPESPYGNLCDAPDSPRPVK 20 2 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 2 KPES(1)PYGNLCDAPDS(1)PRPVK;KPES(0.999)PY(0.001)GNLCDAPDS(1)PRPVK;KPES(0.997)PY(0.003)GNLCDAPDS(1)PRPVK;KPES(0.998)PY(0.002)GNLCDAPDS(1)PRPVK 163.06 5.7017e-09 5820700000.0 3010290.0 2592550.0 2435230.0 2403040.0 2718060.0 2991520.0 2840060.0 2789670.0 3481330.0 2830140.0 True False 2843303.2128356593 2468000.0065031154 2592208.8223057655 2631424.1990996813 2931955.858354104 2972848.814031999 3127160.9811145295 2779993.2858838756 2849208.2291875943 2805067.161415604 1.0136310645056923 0.8798363334935679 0.92411649102818 0.9380966827802112 1.0452355290040416 1.059813773774929 1.114825706895509 0.9910612209658913 1.0157361892717442 1.0 21.41960388286101 -5.753197406806983 7.9924904095418 1.042383131229258 0.9333959868467928 0.5357778165256082 0.04484465996607726 0.09847968812921672 43.240887510775856 0.013691259439660673 0.0168812943731667 1.7652352577248111e-06 5.753197406806983 -0.10898714438246515 KPES(ph)PYGNLCDAPDSPRPVK ddPTM_KYSE-520_SHP099_60min_R1 2 KPESPYGNLCDAPDSPRPVK 20 2 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 KPES(0.961)PYGNLCDAPDS(0.039)PRPVK;KPES(0.789)PY(0.002)GNLCDAPDS(0.209)PRPVK 147.11 1.1170999999999999e-06 6607300000.0 1946030.0 1812480.0 1682880.0 1518870.0 1308720.0 1591270.0 1612400.0 1408250.0 1752750.0 1593910.0 True False 1838079.83658537 1725405.7402120538 1791361.1375032032 1663222.9481350821 1411708.8184017956 1581338.2936783647 1775397.1275075404 1403365.1094380207 1434494.7832318542 1579789.1974432142 1.1634969017133312 1.0921746667242125 1.1339241592501104 1.0528132176285925 0.8936058182234403 1.0009805714823583 1.1238190072326768 0.8883242851066937 0.9080292393146443 1.0 20.591300631465106 -5.519491712903276 5.019520280217928 0.9723529441153064 1.1225188707270024 0.5377432832709091 0.06693448134155602 0.15615668517623996 11.539056138122557 0.020786652571662338 0.028914695853860042 3.0234882633940954e-06 5.519491712903276 0.15016592661169603 KPESPYGNLCDAPDS(ph)PRPVK ddPTM_KYSE-520_SHP099_60min_R1 2 KPESPYGNLCDAPDSPRPVK 20 2 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 KPESPYGNLCDAPDS(1)PRPVK;KPES(0.402)PYGNLCDAPDS(0.598)PRPVK 106.11 0.00023624 1047120000.0 1095610.0 1018350.0 975200.0 979860.0 1057290.0 949470.0 957630.0 1025120.0 1224980.0 1116540.0 True False 1034834.3292556116 969426.937425486 1038062.9523751683 1072985.5997943487 1140492.707842805 943544.0055419866 1054436.5859681496 1021564.0979848078 1002554.5112328372 1106648.3242549743 0.9351067602729984 0.8760027157481404 0.93802423915838 0.9695813713147867 1.030582781219694 0.8526141366338814 0.9528199364310473 0.9231153886873253 0.9059377665508906 1.0 20.07776539807369 -4.9326334413018165 9.95254797227224 0.9450231966993569 0.9057236844714495 0.1046256857156691 0.04827084783906164 0.9166754527970217 128.25710539778137 0.01267136722874323 0.026436057843069162 1.167794858138225e-05 4.9326334413018165 -0.039299512227907396 KPFEEHWR ddPTM_KYSE-520_SHP099_60min_R1 2 KPFEEHWR 8 1 A0A087X1I3;D6RFM5;P31040-3;P31040-2;P31040 A0A087X1I3 SDHA Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 0 ; 147.2 0.00096283 1357940000.0 4509600.0 3926600.0 3172500.0 2835300.0 4282000.0 4132900.0 3857600.0 3249300.0 3244400.0 2789400.0 False True 4259443.498335273 3737960.2420532424 3377004.426179476 3104766.059535973 4618969.038752741 4107105.0380785847 4247563.854547936 3238028.9366923217 2655298.7446683412 2764688.086120358 1.5406596931202032 1.3520368756312982 1.221477548636733 1.1230077183472948 1.6707016831090213 1.4855581932361919 1.5363627730274894 1.171209494824494 0.9604333877658071 1.0 21.398685293187107 -7.5047613827623705 3.913704472363223 0.9916302597122925 1.4084918164604614 0.5782900412675659 0.15192869615594265 0.1747780559585695 5.951110294859683 0.11319905654876643 0.043904518639755974 3.127797421149892e-08 7.5047613827623705 0.41686155674816894 KPFVALGSGEES(ph)PLEGW ddPTM_KYSE-520_SHP099_60min_R1 2 KPFVALGSGEESPLEGW 17 1 E7EUN9;Q9NX74 E7EUN9 DUS2 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like 1 KPFVALGSGEES(1)PLEGW;KPFVALGS(0.001)GEES(0.999)PLEGW 119.54 0.00011354 364480000.0 304100.0 295500.0 281000.0 242890.0 266670.0 268400.0 236840.0 253760.0 308240.0 251650.0 True False 287230.9667916791 281303.73644545744 299113.70961589675 265974.19257245894 287655.41185525275 266724.81604207517 260782.09853565256 252879.7657880293 252271.38609806699 249420.57678073764 1.1515929058418466 1.1278289068056637 1.1992342952475958 1.0663682844670566 1.1532946301704965 1.0693777533701618 1.0455516617817089 1.0138688998796301 1.011429727868184 1.0 17.92822096444389 -6.584316485588675 0.8525697520674453 0.9987376328874313 1.1498620349508621 0.7789632441593695 0.031119946675597487 0.26948919693940576 0.40033138335809454 0.021985913542638118 0.015080529583411259 2.604255046532182e-07 6.584316485588675 0.1511244020634308 KPGDASSLPDAGLS(ph)PGSQVDSK ddPTM_KYSE-520_SHP099_60min_R1 2 KPGDASSLPDAGLSPGSQVDSK 22 1 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 KPGDASSLPDAGLS(0.995)PGS(0.005)QVDSK;KPGDASSLPDAGLS(0.954)PGS(0.046)QVDSK 161.24 1.3414000000000001e-09 1097490000.0 673100.0 611190.0 487330.0 559760.0 496250.0 628610.0 562980.0 710840.0 733040.0 704070.0 True False 635761.8012084167 581827.514985107 518744.07155556884 612959.4221020194 535302.0517237386 624686.6118189604 619891.5125553183 708374.2619513028 599938.4144346196 697832.4875581721 0.9110521687418843 0.8337638693506731 0.743364748423705 0.878376161945201 0.7670924774466239 0.8951813264023278 0.8883099076175405 1.015106454028843 0.85971694515671 1.0 19.412521238131383 -6.7332020441465295 1.9872167054619971 0.9512474458402952 0.8261761033438181 0.43468580029704984 0.0619464524738211 0.30374995199654137 2.456700669625706 0.029699268196631098 0.019357221535280265 1.8484084952206554e-07 6.7332020441465295 -0.1250713424964771 KPGDGEVS(ph)PSTEDAPFQHSPLGK ddPTM_KYSE-520_SHP099_60min_R1 2 KPGDGEVSPSTEDAPFQHSPLGK 23 1 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 KPGDGEVS(0.969)PS(0.03)T(0.001)EDAPFQHSPLGK;KPGDGEVS(0.811)PS(0.167)T(0.022)EDAPFQHSPLGK 218.0 3.6733000000000004e-21 2613000000.0 4626100.0 4305300.0 4277500.0 4518700.0 4581400.0 4595200.0 4629600.0 5136000.0 6085400.0 4860400.0 True False 4369481.011098286 4098466.9256129465 4553234.494241984 4948155.889403306 4941930.115399765 4566519.652297104 5097605.148541868 5118184.41475141 4980444.760450225 4817340.637333985 0.9070317712713059 0.8507737430586021 0.9451759460302223 1.027155076196089 1.0258627087941885 0.9479337244509886 1.0581782631346133 1.0624501774040869 1.033857710175651 1.0 22.199805510773913 -5.052886942897703 3.100209648579851 1.0233174092543156 0.8794920742383221 0.7527973366214202 0.03315248649165169 0.12213633502050195 2.326297937216495 0.009722035644192753 0.02018752300238676 8.853460563054184e-06 5.052886942897703 -0.14382533501599348 KPGDGEVSPSTEDAPFQHS(ph)PLGK ddPTM_KYSE-520_SHP099_60min_R1 1 KPGDGEVSPSTEDAPFQHSPLGK 23 1 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 KPGDGEVSPSTEDAPFQHS(1)PLGK 187.48 3.3461999999999994e-15 463790000.0 430950.0 357090.0 330280.0 321550.0 348270.0 352370.0 312790.0 304730.0 365950.0 313930.0 True False 407044.3444224738 339934.8603969821 351570.3772666842 352110.01532246696 375676.8676147638 350170.72812498553 344409.8657362213 303672.96275451645 299502.7048487788 311148.82443384384 1.30819823974305 1.0925153293299963 1.1299106718670402 1.131645012521435 1.2073864276952775 1.1254123449193314 1.1068975316326461 0.975973357145314 0.9625705814371758 1.0 18.24724526995772 -7.106893952242239 2.113852478906327 0.971571255653064 1.162329482014186 0.6807153489066684 0.056963694589589976 0.1946648486030167 1.6783461525188037 0.03472573580242991 0.016687378861564517 7.818186888858476e-08 7.106893952242239 0.19075822636112205 KPGDLSDELR ddPTM_KYSE-520_SHP099_60min_R1 1 KPGDLSDELR 10 1 Q13435;E9PPJ0;H0YEX5 Q13435 SF3B2 Splicing factor 3B subunit 2 0 110.08 0.0016699999999999998 523050000.0 1412200.0 1388500.0 972660.0 800660.0 1301800.0 1270500.0 994650.0 1116400.0 1087400.0 1152700.0 False True 1333862.4508490947 1321794.3758190083 1035359.219911024 876754.4856727934 1404244.253771209 1262570.3382319538 1095198.9288485334 1112527.468969719 889955.5711232745 1142487.9747870306 1.1675067749380363 1.1569437972118717 0.9062320503671154 0.7674080646986484 1.2291107519385243 1.1051060195774118 0.9586087145054527 0.9737760865072593 0.7789627468850775 1.0 20.123747549656606 -7.17998027665944 2.3234982862720615 0.8979698426397642 1.0460340058360154 0.16549296864083352 0.13859784539309294 0.6278709226188682 6.507897690242339 0.09302481878086474 0.043040875881534095 6.607234538638285e-08 7.17998027665944 0.14806416319625115 KPGLTPS(ph)PSATTPLTK ddPTM_KYSE-520_SHP099_60min_R1 2 KPGLTPSPSATTPLTK 16 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 KPGLTPS(0.997)PS(0.003)ATTPLTK;KPGLT(0.014)PS(0.466)PS(0.119)AT(0.166)T(0.232)PLT(0.004)K 127.37 5.2863e-05 800570000.0 1240640.0 1250660.0 964690.0 855410.0 850800.0 1411290.0 1077760.0 1340620.0 1446510.0 1361480.0 True False 1171819.226045475 1190576.416321067 1026875.4609585736 936707.9092116046 917753.1196101899 1402481.615618557 1186710.4987239682 1335969.702123059 1183860.2475496854 1349418.3464154105 0.8683883905671588 0.8822885945516521 0.7609763596933163 0.6941567911092004 0.6801101541624254 1.0393230678566832 0.8794237175419626 0.9900337472600128 0.8773115103218264 1.0 20.363906250993278 -6.263397868310306 24.999089073000192 0.951733348990764 0.7775101455928569 0.5816144687842173 0.07627656618896572 146.02996924961434 1863986.91767668 0.028036312886075842 0.025978817524276655 5.452581072749337e-07 6.263397868310306 -0.1742232033979071 KPGPPLS(ph)PEIR ddPTM_KYSE-520_SHP099_60min_R1 8 KPGPPLSPEIR 11 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPGPPLS(1)PEIR;KPGPPLS(1)PEIR;KPGPPLS(1)PEIR;KPGPPLS(1)PEIR;KPGPPLS(1)PEIR;KPGPPLS(1)PEIR;KPGPPLS(1)PEIR;KPGPPLS(1)PEIR 120.66 0.00014654 34032650000.0 19784190.0 16793770.0 16484420.0 15335080.0 16493210.0 18004200.0 17670760.0 18315290.0 19495030.0 19489040.0 True False 18686721.541895013 15986972.081237305 17547032.089204557 16792521.39254008 17791131.793471996 17891829.109481107 19457092.870798267 18251758.53381084 15955223.981713606 19316382.26784367 0.967402761178688 0.8276380048582443 0.9084015757140723 0.8693409127906363 0.9210385022815174 0.9262515548403677 1.0072845215529225 0.9448849313877408 0.8259944207189642 1.0 24.203321583801056 -6.038799840985837 2.963521669663116 0.9414093712008388 0.8897407421706219 0.1326893102373875 0.0566433998733878 0.5273733784026879 9.286697002583077 0.01931282898540597 0.020464837750739796 9.145346379714404e-07 6.038799840985837 -0.05166862903021685 KPGPPLS(ph)PEIRS(ph)PAGS(ph)PELR ddPTM_KYSE-520_SHP099_60min_R1 3 KPGPPLSPEIRSPAGSPELR 20 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 3 KPGPPLS(1)PEIRS(1)PAGS(1)PELR;KPGPPLS(1)PEIRS(1)PAGS(1)PELR;KPGPPLS(1)PEIRS(1)PAGS(1)PELR 102.28 0.00040527 5386600000.0 2240240.0 2225860.0 1976220.0 2095580.0 1956130.0 1619330.0 1783840.0 1938140.0 2571660.0 1706190.0 True False 2115969.4213922787 2118926.344516025 2103610.3032637998 2294743.293140898 2110066.302142784 1609223.160810034 1964167.9558007012 1931417.0447052752 2104711.370273018 1691074.4839957345 1.2512573759569634 1.2530059229025476 1.2439489349359172 1.356973518823838 1.2477666253688837 0.9515980378390554 1.1614910959804037 1.1421241719298196 1.2446000399106765 1.0 20.689508774503608 -6.0277326432423095 24.636348453196035 1.1112455267142762 1.2760782780836597 0.5175967667428875 0.08237060609875091 522.1464697525655 463848.84006881213 0.027025547260323694 0.0270941690536547 9.381393587465696e-07 6.0277326432423095 0.16483275136938347 KPGPSGPSES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 KPGPSGPSESPK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPGPS(0.034)GPS(0.08)ES(0.886)PK;KPGPSGPS(0.035)ES(0.965)PK;KPGPSGPSES(1)PK;KPGPS(0.004)GPS(0.006)ES(0.991)PK;KPGPSGPSES(1)PK;KPGPSGPSES(1)PK 213.94 1.1620999999999999e-10 11550500000.0 7576620.0 6486130.0 6550860.0 5725230.0 6110310.0 6431580.0 6549600.0 6063950.0 6985600.0 6619020.0 True False 7156329.784982478 6174526.578920385 6973138.917346591 6269354.1378468275 6591156.634091839 6391438.123546527 7211697.485936105 6042915.572786569 5717191.132645523 6560380.632319636 1.090840636551926 0.9411841972250291 1.0629168196420657 0.9556387790917086 1.004691191486754 0.9742480629948793 1.0992803451689623 0.9211227078831704 0.871472472874493 1.0 22.645348091550037 -7.325092887360069 24.857254996236637 0.9222229258925845 1.0125030815499323 0.31059013151230486 0.05888897178338773 232.73255010485678 90882.63287447768 0.029939659677265872 0.014382549661453973 4.73050071694516e-08 7.325092887360069 0.09028015565734782 KPGTPLPPPATSPSS(ph)PRPLS(ph)PVPHVNNVVNAPLSINIPR ddPTM_KYSE-520_SHP099_60min_R1 1 KPGTPLPPPATSPSSPRPLSPVPHVNNVVNAPLSINIPR 39 2 Q06190;Q06190-2 Q06190 PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B subunit alpha 2 KPGTPLPPPAT(0.035)S(0.037)PS(0.482)S(0.519)PRPLS(0.927)PVPHVNNVVNAPLSINIPR 74.744 0.0048006 1242700000.0 149890.0 196030.0 216780.0 205680.0 176890.0 232380.0 174150.0 189860.0 204320.0 182750.0 True False 141575.302901693 186612.42455297138 230753.98566026366 225227.76536005302 190810.23663357616 230929.63022301564 191754.78154021213 189201.41997365723 167220.63848805157 181130.9771773485 0.7816183907795857 1.030262340881957 1.2739620205014872 1.2434524942662268 1.0534379022686469 1.274931730738185 1.0586526088934067 1.044555839768958 0.9232028728267883 1.0 17.466673772786788 -10.014390876201654 6.457359699494962 0.9999999619049734 1.089161280591018 0.01612472897720052 0.1490832799730429 8.60943158926593e-08 1.3178528085223102e-08 0.1502858132951049 0.03644964791050687 9.674067733485307e-11 10.014390876201654 0.0891613186860446 KPIDS(ph)LRDSR ddPTM_KYSE-520_SHP099_60min_R1 1 KPIDSLRDSR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 KPIDS(1)LRDSR 51.445 0.05545599999999999 1104200000.0 982870.0 912880.0 959490.0 1071500.0 1057900.0 1063300.0 903330.0 1020500.0 1246800.0 859710.0 True False 928348.2417972296 869023.8745391847 1021340.2606382804 1173335.0378417782 1141150.7113723771 1056663.5502888924 994647.4120512195 1016960.1236864915 1020412.5492702764 852093.63824426 1.089490872986791 1.0198689856783927 1.1986244407865236 1.3770024621465742 1.3392315822515934 1.2400791449002588 1.1672982491697645 1.1934839999297955 1.1975356973358442 1.0 19.700652454192653 -4.84552935464101 5.519691883952439 1.2324159875155152 1.055598878452555 0.28748930832342035 0.09805939373230574 0.21567010702263387 10.615606100774299 0.026207100654779884 0.0570030200060236 1.4271533633842834e-05 4.84552935464101 -0.17681710906296022 KPIDSLRDS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 11 KPIDSLRDSR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 KPIDS(0.044)LRDS(0.956)R;KPIDS(0.007)LRDS(0.993)R;KPIDSLRDS(1)R;KPIDSLRDS(1)R;KPIDSLRDS(1)R;KPIDSLRDS(1)R;KPIDSLRDS(1)R;KPIDSLRDS(1)R;KPIDSLRDS(1)R;KPIDSLRDS(1)R;KPIDS(0.002)LRDS(0.998)R 151.74 0.00010779 75585040000.0 43486400.0 37459590.0 37330830.0 37790100.0 37291670.0 38356080.0 38504090.0 39550220.0 41726370.0 34760450.0 True False 41074122.70401076 35659975.068409115 39737235.033239864 41381659.74199213 40226312.26842229 38116685.477254525 42396459.180905394 39413029.51791071 34149913.04418896 34452499.45622085 1.1921957289689264 1.035047547529102 1.153391935575948 1.201122136133439 1.1675876323440129 1.1063547225561905 1.2305771671161048 1.1439817180170995 0.9912172870819899 1.0 25.038105315422364 -7.750495802453269 7.075857211863282 0.9944940085348297 1.1531120572666165 0.6039814672319481 0.051247221076784394 0.08677117121811405 22.450961723469174 0.039841207427883614 0.013210606597845951 1.7762504360363384e-08 7.750495802453269 0.15861804873178675 KPIETGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 14 KPIETGSPK 9 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 KPIET(0.001)GS(0.999)PK;KPIET(0.001)GS(0.999)PK;KPIET(0.363)GS(0.637)PK;KPIET(0.019)GS(0.981)PK;KPIETGS(1)PK;KPIETGS(1)PK;KPIET(0.031)GS(0.969)PK;KPIET(0.306)GS(0.694)PK;KPIET(0.189)GS(0.811)PK;KPIET(0.133)GS(0.867)PK;KPIET(0.002)GS(0.998)PK;KPIET(0.202)GS(0.798)PK;KPIET(0.002)GS(0.998)PK;KPIET(0.002)GS(0.998)PK 153.49 0.00024023 311219880000.0 202893800.0 170545030.0 171549700.0 148380450.0 158223390.0 162397510.0 165275210.0 151554540.0 175728300.0 158645350.0 True False 191638876.45523703 162351790.76549122 182608068.15122494 162482483.35579097 170674670.62505826 161383926.90179223 181982841.15740854 151028832.67383552 143820470.46994847 157239875.62321466 1.2187676675250674 1.0325102975439002 1.1613343461858154 1.0333414645095427 1.08544139931805 1.0263549641091534 1.157358083858347 0.9604995684156967 0.9146564756549262 1.0 27.228391886801816 -7.287694764084152 17.541605008099154 0.9531804541875966 1.0955499910022215 0.5194844887759447 0.06308264020813181 14.940256469758118 9979.499069514222 0.0322397535913151 0.015531852317246112 5.15590890874466e-08 7.287694764084152 0.14236953681462494 KPIETGSPK ddPTM_KYSE-520_SHP099_60min_R1 1 KPIETGSPK 9 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 0 99.28299999999999 0.006441 433190000.0 457910.0 362930.0 325810.0 305940.0 348650.0 355700.0 294260.0 325430.0 397990.0 328480.0 False True 432508.81947904604 345494.29803096375 346812.23391443165 335016.4456157851 376086.77145285887 353479.94435978436 324006.67250084854 324301.1592859327 325725.0485114513 325569.9227535729 1.328466757067164 1.061198451960416 1.065246540531747 1.029015342640734 1.1551643599999337 1.0857266585627963 0.9951984193149574 0.9961029463136234 1.0004764744745658 1.0 18.312607899168228 -4.257064365917406 4.357727811947386 1.0452442461341531 1.350075417686615 0.7587627969246629 0.048335438563609 0.11288510426287045 5.15298999034588 0.013312817589165506 0.10717238601023009 5.5326810437872606e-05 4.257064365917406 0.30483117155246187 KPIKS(ph)PSKDAS(ph)SGK ddPTM_KYSE-520_SHP099_60min_R1 1 KPIKSPSKDASSGK 14 3 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 KPIKS(0.997)PS(0.003)KDAS(0.657)S(0.343)GK 127.17 8.580899999999999e-05 501050000.0 1169600.0 1010800.0 1007700.0 1015600.0 1031600.0 1079400.0 1104900.0 1089100.0 1121100.0 1018700.0 True False 1104719.9564602044 962239.6507582677 1072657.954377007 1112122.3186487264 1112781.0509989075 1072663.0642168992 1216594.0747848419 1085322.1662978514 917536.5006311415 1009675.1105366064 1.0941340882148567 0.9530190857600437 1.0623793170527176 1.101465518009722 1.102117938123189 1.0623843779280813 1.2049361840149406 1.0749221754322944 0.9087442990879546 1.0 19.945459711983926 -7.744571545906593 22.542716992439814 0.9543723133674072 1.081746048525137 0.4086648551370127 0.061371075776718 67.20812301544827 89821.8018425386 0.043855782707442725 0.016437456076017615 1.8006464705380267e-08 7.744571545906593 0.12737373515772965 KPIKS(ph)PSKDASSGK ddPTM_KYSE-520_SHP099_60min_R1 1 KPIKSPSKDASSGK 14 3 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 KPIKS(0.939)PS(0.061)KDASSGK 154.74 0.00040497 3662100000.0 3573000.0 2624100.0 2813600.0 2927800.0 2640000.0 2787400.0 2492100.0 2922600.0 3171100.0 2297200.0 True False 3374798.567401088 2498034.297145596 2994969.1579191736 3206057.2317248345 2847752.9804547457 2770002.802666472 2744025.7885521865 2912462.1827399665 2595308.1769257085 2276848.5951945577 1.4822235323524926 1.097145546883471 1.3154011049484176 1.4081117376409806 1.2507432362718893 1.2165950816899944 1.20518588471084 1.2791637480361735 1.1398685808108986 1.0 21.11860692833302 -10.834668216467241 0.1642366609779087 0.6507235967401033 1.3699389135969091 0.4762831482136649 0.09818078804055619 34.337212652849416 0.8678052617044429 5.091266934168674 0.47152805457915753 1.4632946458600732e-11 10.834668216467241 0.7192153168568058 KPISDNSFS(ph)S(ph)DEEQSTGPIK ddPTM_KYSE-520_SHP099_60min_R1 7 KPISDNSFSSDEEQSTGPIK 20 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 2 KPIS(0.034)DNS(0.017)FS(0.945)S(0.886)DEEQS(0.093)T(0.026)GPIK;KPIS(0.015)DNS(0.015)FS(0.956)S(0.829)DEEQS(0.148)T(0.038)GPIK;KPIS(0.067)DNS(0.346)FS(0.657)S(0.905)DEEQS(0.018)T(0.006)GPIK;KPIS(0.006)DNS(0.208)FS(0.837)S(0.949)DEEQSTGPIK;KPIS(0.06)DNS(0.23)FS(0.784)S(0.922)DEEQS(0.003)T(0.001)GPIK;KPIS(0.01)DNS(0.071)FS(0.929)S(0.99)DEEQSTGPIK;KPIS(0.005)DNS(0.144)FS(0.884)S(0.959)DEEQS(0.007)TGPIK 125.12 2.7838000000000004e-05 6854100000.0 4765370.0 4476930.0 3999420.0 3854320.0 4241790.0 4013090.0 3907610.0 4413300.0 5009350.0 4295320.0 True False 4501025.42657042 4261851.562791074 4257229.012498249 4220633.4139564345 4575594.740516348 3988042.8167298487 4302629.353398502 4397991.292371959 4099778.315437166 4257266.806508395 1.0572570691809529 1.0010769248184468 0.9999911224708568 0.9913950912129923 1.0747728409977269 0.9367613067221994 1.0106553215835 1.0330551248628412 0.9630071362146096 1.0 22.021496077194474 -6.260292797288797 24.999991845731973 0.9921341972582349 1.020330123841914 0.20676648847738588 0.03455889931401298 218.2971769332536 4759812.016718046 0.011700987147894922 0.011078135839369112 5.491705033905235e-07 6.260292797288797 0.028195926583679087 KPISDNSFS(ph)SDEEQSTGPIK ddPTM_KYSE-520_SHP099_60min_R1 4 KPISDNSFSSDEEQSTGPIK 20 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 KPISDNS(0.035)FS(0.95)S(0.015)DEEQSTGPIK;KPIS(0.002)DNS(0.233)FS(0.605)S(0.16)DEEQSTGPIK;KPIS(0.005)DNS(0.131)FS(0.83)S(0.034)DEEQSTGPIK;KPIS(0.003)DNS(0.014)FS(0.696)S(0.287)DEEQSTGPIK 139.73 2.8628e-07 1504630000.0 1686310.0 1459000.0 1360980.0 1331970.0 1337960.0 1350380.0 1405050.0 1440000.0 1666090.0 1351260.0 True False 1592767.022724355 1388907.4499963508 1448710.9484449942 1458560.028328617 1443249.8400489513 1341951.777521973 1547086.1659665527 1435004.9760985274 1363570.0547110322 1339288.887664371 1.1892632257272238 1.0370484387565637 1.0817016117944858 1.089055574016034 1.0776239938538437 1.001988286382519 1.1551549334994977 1.0714678433575888 1.0181298951035171 1.0 20.353035756160914 -3.9443866254278785 0.011264242980066935 2.7611025088711657e-07 2.216089708446667 0.28847065503050007 0.05011072115540907 8050.2990959478175 12.89236588610393 1157.508724258219 1386.6513596919926 0.00011366149775087637 3.9443866254278785 2.2160894323364158 KPISDNSFSS(ph)DEEQSTGPIK ddPTM_KYSE-520_SHP099_60min_R1 1 KPISDNSFSSDEEQSTGPIK 20 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 KPISDNSFS(0.441)S(0.559)DEEQSTGPIK 141.15 1.4588e-06 1511800000.0 690220.0 743100.0 687450.0 540520.0 644030.0 632920.0 583590.0 711030.0 756170.0 621400.0 True False 651932.1206805414 707400.3605841604 731764.126958891 591890.8582867366 694711.496970558 628969.7115102471 642584.9724895342 708563.6028856499 618868.5894944703 615894.8794418846 1.058512000085653 1.1485732130541446 1.188131532481656 0.9610257822294285 1.1279708926953507 1.021228999468563 1.0433354683380966 1.1504619157213003 1.0048282753304922 1.0 19.23232460806883 -1.0002414087145879 0.03087886283824582 0.7024701708590816 1.6204068919809083 0.15926529371804432 0.0675078108542261 2443.1184384355847 5.794516690252727 54.20988765987096 134.78457220636122 0.09994442903563025 1.0002414087145879 0.9179367211218267 KPITDDDVDR ddPTM_KYSE-520_SHP099_60min_R1 1 KPITDDDVDR 10 1 P53618 P53618 COPB1 Coatomer subunit beta 0 69.602 0.059688 407300000.0 301200.0 320940.0 308830.0 179800.0 294710.0 317370.0 285390.0 284130.0 253390.0 313500.0 False True 284491.8355726857 305521.5606592384 328737.675945471 196888.13794115896 317902.00032947696 315389.1761075762 314240.00633799104 283144.4193464409 207380.76344208812 310722.63389930903 0.9155813080062796 0.9832613634391499 1.0579778879320385 0.6336459480610652 1.0231053861126012 1.0150183530234214 1.01131997497106 0.9112449125228355 0.6674144102076925 1.0 18.24526780963639 -7.538712590975632 24.96323837243839 0.8189146418568757 0.9484037479172447 0.09939293413053207 0.13531143697632314 499.3199384313558 787199.2270524848 0.08929019387206967 0.033770047855293424 2.8925935204324417e-08 7.538712590975632 0.129489106060369 KPKEDEVEASEK ddPTM_KYSE-520_SHP099_60min_R1 1 KPKEDEVEASEK 12 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 0 92.45700000000001 0.0016269000000000001 379640000.0 740500.0 689310.0 534070.0 441710.0 715320.0 666960.0 488580.0 541880.0 662550.0 544250.0 False True 699422.9888498477 656194.5129245967 568497.0067422126 483689.9855950463 771611.6143859439 662797.255243749 537970.4344812912 540000.3447557427 542247.6215263248 539428.3684200922 1.296600308393785 1.2164627434157675 1.0538878561527238 0.8966713912575723 1.4304246116048418 1.2287030012622187 0.9972972612785067 1.0010603378856877 1.0052263716023868 1.0 19.041071869022556 -6.7703620001689 24.826971382274188 1.0009842945695084 1.1802589246028978 0.32009050386768045 0.13274029107504984 250.11697275784223 695936.2863808589 0.05898273141991455 0.04042923928067191 1.6968286947047892e-07 6.7703620001689 0.1792746300333894 KPLAAPGDGEGLGQTAQPS(ph)PPAR ddPTM_KYSE-520_SHP099_60min_R1 6 KPLAAPGDGEGLGQTAQPSPPAR 23 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 KPLAAPGDGEGLGQTAQPS(1)PPAR;KPLAAPGDGEGLGQTAQPS(1)PPAR;KPLAAPGDGEGLGQT(0.001)AQPS(0.999)PPAR;KPLAAPGDGEGLGQT(0.002)AQPS(0.998)PPAR;KPLAAPGDGEGLGQTAQPS(1)PPAR;KPLAAPGDGEGLGQTAQPS(1)PPAR 206.94 1.3928e-16 25190900000.0 8879030.0 8533400.0 7912230.0 6303150.0 6731390.0 8393830.0 7030010.0 8479220.0 10450730.0 8949880.0 True False 8386492.50599252 8123442.655105459 8422265.005815605 6902199.4808888575 7261112.096630036 8341440.993436861 7740672.017085883 8449807.564884821 8553140.873464353 8870591.026101276 0.9454265765737232 0.9157724249943019 0.9494592841709764 0.7780991661750019 0.8185601247159938 0.9403478267561409 0.8726219024537754 0.9525642135931731 0.9642131903384068 1.0 23.080598800346458 -7.553452802211528 1.4799816720207475 0.995069154766727 0.885435568412102 0.34675240523909945 0.053390175737591215 0.49635920095197883 1.9500496327472983 0.05225238719659719 0.017048539375030473 2.7960645787678904e-08 7.553452802211528 -0.10963358635462495 KPLFHGDSEIDQLFR ddPTM_KYSE-520_SHP099_60min_R1 2 KPLFHGDSEIDQLFR 15 1 A0A087WZZ9;P06493;A0A024QZP7;P06493-2 A0A087WZZ9 CDK1;CDC2 Cyclin-dependent kinase 1 0 ; 210.1 9.9785e-14 1832180000.0 1617310.0 1755750.0 1189690.0 1340000.0 1587010.0 1684480.0 1214770.0 1160610.0 1142420.0 1244580.0 False True 1527594.590272445 1671401.1345655227 1266379.3209713032 1467353.1971143084 1711898.658148292 1673966.5354938693 1337570.80661271 1156584.11479841 934985.3260646054 1233553.989468589 1.2383686513230991 1.3549476949002912 1.0266103727789453 1.1895330156943025 1.3877776512123092 1.3570273776302313 1.0843228736092299 0.9376031569535621 0.7579606033031387 1.0 20.2343894293757 -7.108516927405128 2.7863564404471366 0.880013311165843 1.2544783996941526 0.6671087645900393 0.11377660035602703 0.17309569880419717 2.5813424489085577 0.06599379695433827 0.03439015409589598 7.78902454844048e-08 7.108516927405128 0.3744650885283096 KPLLS(ph)PIPELPEVPEMTPSIPSIR ddPTM_KYSE-520_SHP099_60min_R1 3 KPLLSPIPELPEVPEMTPSIPSIR 24 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 KPLLS(1)PIPELPEVPEMTPSIPSIR;KPLLS(1)PIPELPEVPEMTPSIPSIR;KPLLS(1)PIPELPEVPEMTPSIPSIR 119.18 0.00013419999999999998 657008000.0 309526.0 406956.0 329556.0 284227.0 262031.0 344267.0 267750.0 359671.0 417837.0 339807.0 True False 292355.9757552164 387405.2229065901 350799.70706824365 311239.8486240361 282651.3489475526 342118.3019536404 294816.7829881812 358423.3852488428 341968.33361360664 336796.5743458454 0.8680491371477121 1.1502647366857608 1.04157742028581 0.9241182135790791 0.8392346314582975 1.0158010146573828 0.8753556462407587 1.0642132745708677 1.0153557359596257 1.0 18.36151793885242 -10.251667314666886 13.60886960031581 0.9999999998579182 0.9791904226245247 0.004848661702979706 0.09422861927972771 0.0 0.0 0.09273490201213334 0.02249151725462099 5.6018656040879425e-11 10.251667314666886 -0.020809577233393495 KPLS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 2 KPLSPPK 7 1 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 KPLS(1)PPK;KPLS(1)PPK 73.985 0.024380000000000002 1013290000.0 2500600.0 2340800.0 2015600.0 1433740.0 1580190.0 2377300.0 1928640.0 2436400.0 2592500.0 2636200.0 True False 2361886.7331774854 2228344.4543875665 2145528.8010740248 1570002.2185303494 1704541.962948782 2362462.3888853383 2123605.7529125144 2427948.6970600337 2121767.351606665 2612845.3189325663 0.9039519928957732 0.8528420868396139 0.8211465047424025 0.6008783631982269 0.6523700238195286 0.9041723104567408 0.8127560164105228 0.9292355270582688 0.812052415132434 1.0 21.31719028861882 -6.297142910879488 24.96455113900946 0.882290041271227 0.7649129499638545 0.2879787824258714 0.09803342363736928 925.0243316115246 646790.7924022272 0.037394114186481205 0.032979582713172695 5.044952587860197e-07 6.297142910879488 -0.1173770913073725 KPLS(ph)PVRDNIQLTPEAEEDIFNKPECGR ddPTM_KYSE-520_SHP099_60min_R1 4 KPLSPVRDNIQLTPEAEEDIFNKPECGR 28 3 Q9UQ84;H0YAZ2 Q9UQ84 EXO1 Exonuclease 1 1 KPLS(1)PVRDNIQLTPEAEEDIFNKPECGR;KPLS(1)PVRDNIQLTPEAEEDIFNKPECGR;KPLS(1)PVRDNIQLTPEAEEDIFNKPECGR;KPLS(1)PVRDNIQLTPEAEEDIFNKPECGR 185.19 1.9824999999999998e-15 6607410000.0 1777014.0 1728415.0 1693821.0 1545447.0 1499775.0 1711171.0 1433114.0 1447157.0 2078883.0 1772982.0 True False 1678439.4910304141 1645379.3489961934 1803007.4118694218 1692325.8182244175 1617798.759947547 1700490.9470623462 1577987.1489647985 1442137.150135983 1701410.2515757452 1757274.7588391239 0.9551377680626396 0.9363244653233113 1.0260247595319183 0.9630399627104345 0.9206293733008967 0.9676864352081801 0.8979740595643877 0.8206668552438979 0.9682095773683772 1.0 20.74490835100853 -6.194578330024513 1.438354504053202 0.9120467036314576 0.9697679475468991 0.08798823163948455 0.05178819750160589 0.7258130818775484 3.0236240044325764 0.02308550299743853 0.02203663644928426 6.388834969404007e-07 6.194578330024513 0.057721243915441534 KPLSLAGDEETECQSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 13 KPLSLAGDEETECQSSPK 18 1 F5H1K3;Q86TN4-2;Q86TN4;Q86TN4-4 F5H1K3 TRPT1 tRNA 2-phosphotransferase 1 1 KPLSLAGDEETECQS(0.009)S(0.991)PK;KPLSLAGDEETECQS(0.013)S(0.987)PK;KPLSLAGDEETECQS(0.105)S(0.895)PK;KPLSLAGDEETECQS(0.003)S(0.997)PK;KPLSLAGDEETECQS(0.023)S(0.977)PK;KPLSLAGDEETECQS(0.009)S(0.991)PK;KPLSLAGDEETECQS(0.006)S(0.994)PK;KPLSLAGDEETECQSS(1)PK;KPLSLAGDEETECQS(0.016)S(0.984)PK;KPLSLAGDEETECQS(0.01)S(0.99)PK;KPLSLAGDEETECQS(0.001)S(0.999)PK;KPLSLAGDEETECQS(0.021)S(0.979)PK;KPLSLAGDEETECQS(0.204)S(0.796)PK 272.18 2.5814999999999997e-30 30498060000.0 12600790.0 11123840.0 10279270.0 10331310.0 11586060.0 10739580.0 10359380.0 11178180.0 13227120.0 10363870.0 True False 11901799.059647895 10589434.029175756 10941888.191613527 11313194.596178392 12497817.006336179 10672550.29757506 11406607.228205815 11139405.502586823 10825408.436560685 10272054.174768856 1.1586581278827526 1.0308974085423417 1.0652093539858831 1.1013565936954341 1.2166813758668098 1.0389889029002533 1.1104504546153728 1.0844379627541718 1.053869873773741 1.0 23.2922213805718 -8.034875971200885 1.3152785672969316 0.9999744705714856 1.1017026482551058 0.2806643007837959 0.05179873733945385 0.690156594484002 2.66970776110676 0.04982281025162641 0.015197071592561555 9.228349390613881e-09 8.034875971200885 0.10172817768362019 KPLTSNCTIQIAT(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 1 KPLTSNCTIQIATPGK 16 1 Q15061;C9IZK7 Q15061 WDR43 WD repeat-containing protein 43 1 KPLTSNCTIQIAT(1)PGK 106.03 0.0010097 607400000.0 1260700.0 1327900.0 985290.0 871640.0 999840.0 1355800.0 945660.0 1182800.0 1374800.0 1249900.0 True False 1190766.4578568575 1264105.6907814634 1048803.3699197401 954480.4035318769 1078521.7196885888 1347337.9492915256 1041256.5415522092 1178697.1428675961 1125170.975887694 1238826.8584074855 0.9612049091247425 1.02040546037763 0.846610131837131 0.7704711897826169 0.8705992386014545 1.0875918132930467 0.8405182164767937 0.9514623733479702 0.9082552321589988 1.0 20.24054313616366 KPLTSSSAAPQRPIS(ph)TQR ddPTM_KYSE-520_SHP099_60min_R1 1 KPLTSSSAAPQRPISTQR 18 2 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 1 KPLTSSSAAPQRPIS(0.929)T(0.071)QR 97.352 0.00068046 603530000.0 224600.0 178270.0 184370.0 176520.0 196440.0 216720.0 152770.0 218510.0 243800.0 213770.0 True False 212140.99027100034 169705.64161127448 196254.78520243007 193296.40772732682 211898.71040929205 215367.3700917976 168213.48249152 217752.03981061725 199532.0656978611 211876.16411054344 1.0012499101140926 0.8009661791060788 0.9262711831050371 0.9123084162807342 1.0001064126247672 1.016477577814901 0.7939235788871322 1.0277325942950721 0.9417390886582128 1.0 17.692861769302404 -6.859610397054775 0.15260366080817753 1.0298055098623358 0.8613656008662167 0.07257391764112475 0.07829262349659008 15.89622862923078 1.7706625136098475 0.6930703441207988 1.0001138560192564 1.3816231545703102e-07 6.859610397054775 -0.16843990899611905 KPLVIIAEDVDGEALSTLVLNR ddPTM_KYSE-520_SHP099_60min_R1 4 KPLVIIAEDVDGEALSTLVLNR 22 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ;;; 308.37 1.041e-53 48064680000.0 19597010.0 16415760.0 14569630.0 26291310.0 21009930.0 11567240.0 13387080.0 20785210.0 16876190.0 9110896.0 False True 18509924.78962908 15627122.249041885 15508811.662032243 28790028.197629396 22663291.9608506 11495044.56451017 14740376.69171028 20713110.95781449 13811899.310129553 9030180.549609836 2.0497845738454066 1.7305437209355776 1.717442035276064 3.1882007274896975 2.509727445242477 1.272958442121828 1.6323457333693248 2.2937648748019144 1.5295263737253093 1.0 23.10632340259207 -6.25656565130327 24.982610654856515 1.6319935559314576 2.234626773531241 0.31631753749553626 0.50174628053519 641.6090941964451 3288875.6427884507 0.18090780596628697 0.17540116717972012 5.539038052384178e-07 6.25656565130327 0.6026332175997833 KPNAGGS(ph)PAPVR ddPTM_KYSE-520_SHP099_60min_R1 8 KPNAGGSPAPVR 12 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 KPNAGGS(1)PAPVR;KPNAGGS(1)PAPVR;KPNAGGS(1)PAPVR;KPNAGGS(1)PAPVR;KPNAGGS(1)PAPVR;KPNAGGS(1)PAPVR;KPNAGGS(1)PAPVR;KPNAGGS(1)PAPVR 128.46 8.329899999999999e-05 11244560000.0 9259000.0 7385970.0 7447390.0 7743630.0 7555350.0 7350910.0 7591870.0 8225130.0 7464650.0 7673430.0 True False 8745384.812641108 7031136.914633012 7927460.6756453095 8479582.266992737 8149913.060938938 7305030.24400838 8359330.309111063 8196598.943789767 6109257.728513286 7605449.380038205 1.1498840338869203 0.9244867151555077 1.042339548857202 1.1149350739548465 1.0715886272716206 0.9604994891139075 1.0991237849865318 1.0777271051600363 0.8032737348233587 1.0 22.858602063716912 -7.743261458089002 24.999153283655026 0.9016368125480991 1.0511575644851312 0.3812624317431109 0.07805857366362975 210.44945898350403 289422.51813180745 0.0506763528376333 0.019070538583863473 1.8060864813086717e-08 7.743261458089002 0.14952075193703207 KPNEGADGQWK ddPTM_KYSE-520_SHP099_60min_R1 1 KPNEGADGQWK 11 1 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 149.41 0.00014494 1199300000.0 2621900.0 2415500.0 1825600.0 1462100.0 2471300.0 2457300.0 2059300.0 2287600.0 1894100.0 2370400.0 False True 2476457.980371932 2299455.7542605842 1943281.0970632795 1601057.5444036066 2665777.250226446 2441963.079210846 2267474.14083123 2279664.8495298564 1550179.186375386 2349400.1001432915 1.0540809886834053 0.9787416601030786 0.827139275657968 0.6814750473135491 1.1346629507949106 1.0393985592585568 0.96512898790331 0.9703178481140007 0.6598191539537431 1.0 21.16386099290827 -11.274873674951468 2.3205993644517124 1.3157634548635218 0.9273281747742855 0.02287625145340022 0.14818123149325566 14725380.755543485 2546656.371184873 24580599.27999064 0.03788407544993995 5.3103888726564815e-12 11.274873674951468 -0.3884352800892362 KPNIFYSGPAS(ph)PARPR ddPTM_KYSE-520_SHP099_60min_R1 5 KPNIFYSGPASPARPR 16 2 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 KPNIFYSGPAS(1)PARPR;KPNIFYS(0.004)GPAS(0.996)PARPR;KPNIFYS(0.035)GPAS(0.965)PARPR;KPNIFYSGPAS(1)PARPR;KPNIFYSGPAS(1)PARPR 163.74 3.5507e-08 26404400000.0 7888500.0 6962380.0 6890350.0 6599320.0 6525420.0 7149980.0 6309160.0 6611610.0 7973260.0 6521860.0 True False 7450909.179665118 6627896.814054564 7334512.985949807 7226517.388642102 7038933.429439027 7105354.322669593 6946951.464267845 6588675.868071374 6525516.973528013 6464081.394330296 1.1526632672355237 1.025342412901538 1.1346566570747352 1.1179496277662198 1.0889301975084873 1.0992055775940204 1.0747004934623934 1.0192748924619608 1.0095041469081132 1.0 22.624013933635627 -7.206353431676623 1.803920583150405 1.0027427348050602 1.1018233773121708 0.6388334001388606 0.03158615367756854 0.2384701727333315 1.4449207852966015 0.021950585510298753 0.009154687976558745 6.217940591588735e-08 7.206353431676623 0.09908064250711068 KPPAPPS(ph)PVQS(ph)QS(ph)PSTNWSPAVPVK ddPTM_KYSE-520_SHP099_60min_R1 2 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 KPPAPPS(1)PVQS(0.981)QS(0.942)PS(0.044)T(0.033)NWS(0.001)PAVPVK;KPPAPPS(0.998)PVQS(0.986)QS(0.781)PS(0.131)T(0.1)NWS(0.004)PAVPVK 99.515 0.004603100000000001 724180000.0 259630.0 202669.0 209852.0 203400.0 218250.0 238989.0 217460.0 231550.0 249720.0 213265.0 True False 245227.80634042673 192932.47702762904 223379.39569507196 222731.0748455599 235425.03332736713 237497.38100253142 239442.9790050794 230746.8070941761 204377.1429289169 211375.6380176594 1.160151702628754 0.9127469884278266 1.0567887472273871 1.053721596937069 1.1137756249265516 1.123579723897461 1.1327841810468011 1.0916433381736184 0.9668907204520996 1.0 17.68944958371914 -3.940614247266502 16.920522522617713 1.058852303264383 2.184198234038788 0.17826771884420234 0.06858954531558364 6240364.832295561 35885030.73780666 0.01769813346584252 243958569.97576442 0.0001146530870690024 3.940614247266502 1.1253459307744051 KPPAPPS(ph)PVQS(ph)QSPS(ph)TNWSPAVPVKK ddPTM_KYSE-520_SHP099_60min_R1 1 KPPAPPSPVQSQSPSTNWSPAVPVKK 26 2 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 KPPAPPS(0.99)PVQS(0.54)QS(0.463)PS(0.408)T(0.377)NWS(0.222)PAVPVKK 57.427 0.029981 1989500000.0 335890.0 327860.0 342020.0 281290.0 295960.0 361970.0 279400.0 313850.0 398890.0 263850.0 True False 317257.51211988565 312109.11347210687 364067.1564513485 308023.7170270775 319250.3682179498 359710.8109640463 307644.4786812245 312761.32760314044 326461.63119860477 261512.49427219384 1.213163879618195 1.1934768713086794 1.3921597033616726 1.1778546867687045 1.2207843801361928 1.375501434320164 1.1764045138165156 1.195970878842999 1.2483595940881087 1.0 17.996520350140106 -9.6192438323783 0.5088622549592172 0.9498679297203596 1.2542819450591967 0.49930534791626324 0.0735442121460899 9.433436226666013 1.951891347671441 0.8777939688578039 0.03542563896753309 2.403013261897871e-10 9.6192438323783 0.30441401533883705 KPPAPPS(ph)PVQS(ph)QSPSTNWS(ph)PAVPVK ddPTM_KYSE-520_SHP099_60min_R1 2 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 KPPAPPS(0.957)PVQS(0.518)QS(0.518)PS(0.059)T(0.045)NWS(0.903)PAVPVK;KPPAPPS(1)PVQS(0.907)QS(0.095)PS(0.038)T(0.005)NWS(0.956)PAVPVK 157.15 2.2416999999999998e-07 21330300000.0 2251240.0 1860480.0 1858700.0 1958630.0 2059650.0 2042920.0 2023400.0 2058110.0 2222460.0 1989120.0 True False 2126359.2294643233 1771099.7481625846 1978514.7760251507 2144777.6063164156 2221732.737194552 2030169.378497303 2227945.018480997 2050970.8967764839 1818917.2876573768 1971497.9443119406 1.0785500616925217 0.8983523179785533 1.0035591372202313 1.0878923878690374 1.126926225616707 1.0297598251900988 1.1300772719083698 1.0403109486843922 0.9226067381430545 1.0 20.910860775467334 -3.921897659311925 21.69394546924849 1.0327612579653136 3.345262154886834 0.03750599479431327 0.07319067001628632 4684.705807927507 1271137.8246357234 0.0185920566470555 12270.976759142626 0.00011970225742209608 3.921897659311925 2.31250089692152 KPPAPPS(ph)PVQS(ph)QSPSTNWS(ph)PAVPVKK ddPTM_KYSE-520_SHP099_60min_R1 2 KPPAPPSPVQSQSPSTNWSPAVPVKK 26 2 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 KPPAPPS(1)PVQS(0.842)QS(0.15)PS(0.059)T(0.045)NWS(0.904)PAVPVKK;KPPAPPS(1)PVQS(0.96)QS(0.04)PS(0.031)T(0.017)NWS(0.953)PAVPVKK 129.61 0.00027225 19651300000.0 3637400.0 3341100.0 3351100.0 2972100.0 3026200.0 2932900.0 2760700.0 2943400.0 3637000.0 2713600.0 True False 3435626.1710228682 3180588.540906656 3567117.267949581 3254567.490405548 3264344.7232773304 2914594.683195985 3039778.497835562 2933190.032394722 2976612.481308944 2689559.615148854 1.2773935746476186 1.182568522739596 1.3262830271015051 1.2100744940079804 1.2137097482022776 1.0836698568715966 1.1302142108002038 1.0905837579779336 1.106728575393263 1.0 21.358938536510188 -6.136685721426717 1.7233479175376767 1.0855519934224613 1.2533245779159905 0.7381444250666362 0.04780054340536759 0.1901729801480539 1.1239011681926152 0.018359059735250687 0.018336882037421044 7.299855755304172e-07 6.136685721426717 0.16777258449352916 KPPAPPS(ph)PVQS(ph)QSPSTNWSPAVPVKK ddPTM_KYSE-520_SHP099_60min_R1 1 KPPAPPSPVQSQSPSTNWSPAVPVKK 26 2 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KPPAPPS(0.993)PVQS(0.253)QS(0.253)PS(0.24)T(0.24)NWS(0.019)PAVPVKK 45.992 0.051073 4389900000.0 269330.0 300060.0 281350.0 254480.0 283810.0 262710.0 233170.0 238370.0 373970.0 246830.0 True False 254389.72800395577 285644.6672007577 299486.27117591683 278665.7026877984 306144.2323419931 261070.32944267345 256741.09911990393 237543.15010597603 306066.4750165268 244643.27823083414 1.0398394341491997 1.1675966299439322 1.2241753517271599 1.1390695248322429 1.2513903286283201 1.0671469550712098 1.0494508615832676 0.9709776284220704 1.251072489012907 1.0 17.900320118555555 -6.367564670549483 10.738931225036286 1.0645017518444502 1.1664722361489788 0.23638243593907637 0.08676023560466942 0.7263327822759986 69.4101248694951 0.029695035023986422 0.026178269642232393 4.2897830556193776e-07 6.367564670549483 0.1019704843045286 KPPAPPS(ph)PVQSQS(ph)PS(ph)TNWSPAVPVKK ddPTM_KYSE-520_SHP099_60min_R1 1 KPPAPPSPVQSQSPSTNWSPAVPVKK 26 2 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 KPPAPPS(0.679)PVQS(0.606)QS(0.677)PS(0.346)T(0.346)NWS(0.346)PAVPVKK 60.747 0.024881999999999998 297980000.0 894180.0 823120.0 789680.0 759910.0 712370.0 794330.0 671440.0 773890.0 1000500.0 731050.0 True False 844578.0528963632 783576.0796716905 840584.0363326743 832131.6179247282 768429.4661691472 789372.2918282478 739315.7078229109 771205.5562172842 818834.4205525434 724573.4657482939 1.1656210071454054 1.0814308233913346 1.1601087758086366 1.1484434046523564 1.0605266442865964 1.0894303050595895 1.0203460970784959 1.0643579880762424 1.130091645996038 1.0 19.46677244896349 -5.765868455805871 24.992940644037127 1.0634196117077914 1.1363108353687326 0.4831164407479255 0.039487702043112485 102.59166659004961 578917.5199128506 0.011835492809523254 0.013882242077420984 1.7144765295818923e-06 5.765868455805871 0.07289122366094114 KPPAPPS(ph)PVQSQS(ph)PSTNWS(ph)PAVPVK ddPTM_KYSE-520_SHP099_60min_R1 4 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 KPPAPPS(0.997)PVQS(0.122)QS(0.304)PS(0.307)T(0.307)NWS(0.964)PAVPVK;KPPAPPS(0.996)PVQS(0.079)QS(0.922)PS(0.001)T(0.002)NWS(1)PAVPVK;KPPAPPS(0.999)PVQS(0.013)QS(0.979)PS(0.006)T(0.002)NWS(0.999)PAVPVK;KPPAPPS(1)PVQS(0.221)QS(0.779)PS(0.027)T(0.016)NWS(0.958)PAVPVK 168.52 4.7802e-10 28935040000.0 3739600.0 3231640.0 2997970.0 3199830.0 3053660.0 3290970.0 3144680.0 3297360.0 3581160.0 3194700.0 True False 3532156.93329222 3076387.163609466 3191223.943121598 3503940.881136029 3293965.669051306 3270429.8355066627 3462574.943519228 3285922.227769606 2930911.6176970955 3166397.443438988 1.1155128174484579 0.9715732843278945 1.0078406138604148 1.1066017275868056 1.0402881280354266 1.032855127609845 1.0935376892417412 1.0377478779798417 0.9256297322277603 1.0 21.594410921985393 -7.660592936703666 6.7411243883601095 0.9638134325151386 1.0496742804398898 0.37767909378639886 0.04531005618257819 0.21649577319324123 12.203800797799227 0.031075322040738217 0.011419379170292851 2.1847767390512642e-08 7.660592936703666 0.08586084792475113 KPPAPPS(ph)PVQSQS(ph)PSTNWS(ph)PAVPVKK ddPTM_KYSE-520_SHP099_60min_R1 3 KPPAPPSPVQSQSPSTNWSPAVPVKK 26 2 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 KPPAPPS(0.993)PVQS(0.171)QS(0.806)PS(0.268)T(0.187)NWS(0.575)PAVPVKK;KPPAPPS(1)PVQS(0.127)QS(0.835)PS(0.027)T(0.021)NWS(0.991)PAVPVKK;KPPAPPS(1)PVQS(0.168)QS(0.831)PS(0.038)T(0.004)NWS(0.958)PAVPVKK 152.62 1.3447e-06 4997300000.0 3754930.0 3488330.0 3500920.0 3109710.0 3332370.0 3413380.0 3056450.0 3224570.0 4343680.0 3307210.0 True False 3546636.547632619 3320745.390709923 3726594.90487005 3405255.903431599 3594608.5604083287 3392075.82929098 3365425.794077412 3213384.7192902984 3554977.2072620415 3277910.692370443 1.081980834892071 1.0130676831553649 1.1368811583378247 1.0388495059848826 1.096615770763682 1.0348286294639644 1.026698439927197 0.9803149081424539 1.084525339734389 1.0 21.64434511765128 -6.441804804000571 5.288830575716345 1.0223429755983129 1.0716278157903207 0.2734894403703032 0.03956779107548035 0.30320273761699623 14.529429514294101 0.013525276610678367 0.011742572072794619 3.6157233676314744e-07 6.441804804000571 0.04928484019200785 KPPAPPS(ph)PVQSQS(ph)PSTNWSPAVPVK ddPTM_KYSE-520_SHP099_60min_R1 6 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KPPAPPS(0.96)PVQS(0.473)QS(0.539)PS(0.01)T(0.01)NWS(0.008)PAVPVK;KPPAPPS(1)PVQS(0.087)QS(0.586)PS(0.087)T(0.087)NWS(0.154)PAVPVK;KPPAPPS(0.999)PVQS(0.005)QS(0.994)PS(0.001)T(0.001)NWSPAVPVK;KPPAPPS(1)PVQS(0.004)QS(0.963)PS(0.027)T(0.006)NWSPAVPVK;KPPAPPS(0.996)PVQS(0.425)QS(0.521)PS(0.026)T(0.029)NWS(0.003)PAVPVK;KPPAPPS(1)PVQS(0.005)QS(0.93)PS(0.034)T(0.03)NWS(0.001)PAVPVK 146.67 7.224899999999999e-07 17866600000.0 6764530.0 5748940.0 5706940.0 6002500.0 6041410.0 6001270.0 6168160.0 5676600.0 6503300.0 6305440.0 True False 6389288.036143761 5472752.2930651335 6074818.483826852 6572975.795282567 6516834.596079219 5963813.847871921 6791697.80824045 5656909.199528396 5322464.654851927 6249578.70715808 1.0223549995179133 0.8756993950323094 0.9720364793340289 1.0517470222039251 1.0427638248023074 0.9542745403047964 1.0867449033742775 0.9051664863503746 0.8516517519422127 1.0 22.57532750828617 -7.344525538788943 24.999882397201056 0.9088061396723233 0.9966698105873362 0.24275862548594818 0.06524233564705446 130.1065704164421 39145.73897014884 0.03599668420707516 0.017292238417015448 4.523498610106093e-08 7.344525538788943 0.0878636709150129 KPPAPPS(ph)PVQSQSPS(ph)TNWSPAVPVK ddPTM_KYSE-520_SHP099_60min_R1 1 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KPPAPPS(0.938)PVQS(0.065)QS(0.121)PS(0.286)T(0.286)NWS(0.304)PAVPVK 54.559 0.042245 202970000.0 224110.0 226680.0 205350.0 197030.0 205630.0 227930.0 241070.0 230830.0 281190.0 223150.0 True False 211678.1715477911 215789.9525463833 218587.1895716169 215755.6719607706 221811.91112534472 226507.40432365917 265439.7082164741 230029.30460612694 230132.9842230581 221173.06460807298 0.9570703011367718 0.9756610866190748 0.9883083636742189 0.9755060922228382 1.002888446287091 1.0241183967181484 1.2001448218246795 1.0400421272533686 1.0405108986976441 1.0 17.754816173198844 -6.396165203568246 3.5497684757923635 1.0769752895149614 0.9796286666463033 0.40059965232164363 0.0507049029776947 0.2350263728047554 5.392181131154216 0.018929844721352392 0.016325421095605558 4.0163800058952925e-07 6.396165203568246 -0.09734662286865803 KPPAPPS(ph)PVQSQSPS(ph)TNWSPAVPVKK ddPTM_KYSE-520_SHP099_60min_R1 1 KPPAPPSPVQSQSPSTNWSPAVPVKK 26 2 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KPPAPPS(0.884)PVQS(0.154)QS(0.147)PS(0.386)T(0.352)NWS(0.077)PAVPVKK 71.068 0.018090000000000002 5116500000.0 121400.0 119940.0 114290.0 109310.0 115570.0 107410.0 97981.0 86615.0 135310.0 107690.0 True False 114665.69999509984 114177.90236638958 121657.31627046547 119698.78953475018 124664.70149664982 106739.61434828362 107885.87568240908 86314.55278109292 110741.11488752092 106735.95038155223 1.0742931466408543 1.0697230123330927 1.1397970021869237 1.1214477325292864 1.167972937431176 1.0000343273912706 1.0107735518983638 0.8086736706099649 1.037524044069981 1.0 16.70368665530062 -6.546984762533163 2.477242524354549 0.9458026291724125 1.1132274891282996 0.5415577045875416 0.06512254081101713 0.2057464847431288 2.55084427302277 0.026879460934339083 0.020671688983205875 2.838018600177993e-07 6.546984762533163 0.16742485995588707 KPPAPPS(ph)PVQSQSPSTNWS(ph)PAVPVK ddPTM_KYSE-520_SHP099_60min_R1 3 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KPPAPPS(0.925)PVQS(0.04)QS(0.035)PS(0.062)T(0.062)NWS(0.876)PAVPVK;KPPAPPS(0.924)PVQS(0.076)QSPSTNWS(1)PAVPVK;KPPAPPS(0.962)PVQS(0.037)QS(0.007)PS(0.057)T(0.05)NWS(0.887)PAVPVK 152.02 3.9890999999999996e-07 1660810000.0 1079450.0 886130.0 825200.0 889650.0 929280.0 964800.0 850510.0 926470.0 1042700.0 905080.0 True False 1019570.7566697744 843558.9846917522 878393.7123666831 974202.068516974 1002409.0491200711 958778.3253256114 936487.8509776961 923256.2918097228 853371.9643279742 897061.695341585 1.1365670410010542 0.9403578249660299 0.9791898560914548 1.0859922718537385 1.1174360184205299 1.0687986459621663 1.0439503278769453 1.0292004402865105 0.9512968492128354 1.0 19.774847684221857 -7.602578323609172 4.77165923950247 0.9765838999450516 1.049558592300607 0.22417581209195625 0.05658483264702657 0.3527570300605372 14.35911848777568 0.04365360700524203 0.015422393150647432 2.497018019397311e-08 7.602578323609172 0.07297469235555543 KPPAPPS(ph)PVQSQSPSTNWS(ph)PAVPVKK ddPTM_KYSE-520_SHP099_60min_R1 1 KPPAPPSPVQSQSPSTNWSPAVPVKK 26 2 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KPPAPPS(1)PVQSQSPS(0.001)TNWS(0.999)PAVPVKK 169.92 1.6965999999999999e-10 4601300000.0 1497500.0 1202300.0 1127900.0 1143200.0 1215900.0 1252700.0 1204700.0 1115600.0 1354900.0 1112800.0 True False 1414430.6898077608 1144539.7033109067 1200606.2387038085 1251849.3842843873 1311584.4124753512 1244881.4346345286 1326482.832738982 1111730.2439829963 1108884.314249517 1102941.4577453 1.2824168317140114 1.037715733027793 1.0885493788203056 1.1350098189649105 1.1891695640461026 1.128692212893503 1.2026774616403113 1.0079684974900327 1.005388188523048 1.0 20.072924786489228 -7.278578718313188 23.457836339150187 1.0050086870952886 1.145070369397111 0.5363116110380843 0.06265018785386409 311.6980602928701 426602.5830026885 0.03374890552670827 0.016295702733213593 5.2652777012968683e-08 7.278578718313188 0.14006168230182237 KPPAPPS(ph)PVQSQSPSTNWSPAVPVK ddPTM_KYSE-520_SHP099_60min_R1 4 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 KPPAPPS(0.999)PVQS(0.001)QSPSTNWSPAVPVK;KPPAPPS(0.986)PVQS(0.012)QS(0.002)PSTNWSPAVPVK;KPPAPPS(0.995)PVQS(0.003)QS(0.001)PSTNWSPAVPVK;KPPAPPS(1)PVQSQSPSTNWSPAVPVK 227.57 6.2139e-22 6401770000.0 3019790.0 3592800.0 2410830.0 2363610.0 2527830.0 3772290.0 2699760.0 3356850.0 3592850.0 3574000.0 True False 2852276.228897879 3420196.495097259 2566235.9592643864 2588246.783754743 2726755.839614743 3748745.73885007 2972678.0879184776 3345205.8708446766 2940479.0083780177 3542337.140529925 0.8051961503786128 0.9655197569889143 0.7244471255721537 0.7306607702979813 0.7697618073718491 1.0582690438915328 0.8391855348567336 0.944349941333998 0.8300957508347523 1.0 21.75627009587584 -6.2207041111686925 24.952583005254798 0.9249523880617407 0.8004102286592792 0.3643930537640132 0.08887871870348643 624.1734569552339 382340.520235633 0.029748379854357788 0.029748090032667217 6.015834622475086e-07 6.2207041111686925 -0.1245421594024615 KPPAPPS(ph)PVQSQSPSTNWSPAVPVKK ddPTM_KYSE-520_SHP099_60min_R1 4 KPPAPPSPVQSQSPSTNWSPAVPVKK 26 2 A9Z1X7;Q8IYB3-2;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 KPPAPPS(1)PVQSQSPSTNWSPAVPVKK;KPPAPPS(1)PVQSQSPSTNWSPAVPVKK;KPPAPPS(0.995)PVQS(0.004)QS(0.001)PSTNWSPAVPVKK;KPPAPPS(0.866)PVQS(0.132)QS(0.002)PSTNWSPAVPVKK 150.23 6.6619e-07 4971490000.0 3802790.0 4013800.0 3334230.0 2461250.0 2720220.0 3861700.0 2867880.0 3422410.0 4334590.0 3624380.0 True False 3591841.6580260727 3820971.0231633736 3549159.800756627 2695166.4599982016 2934285.838065383 3837597.6978751165 3157793.2982115657 3410538.458506496 3547537.722121787 3592270.8129249695 0.9998805338123861 1.063664523681105 0.9879989526365248 0.7502681730734243 0.8168331372756864 1.068292981717153 0.8790521268190148 0.9494101742650912 0.9875474057684535 1.0 21.776464684920075 -5.0093951954205505 24.842554416292412 0.9156179829208658 1.0302873650540902 0.2072961254550021 0.08787514518521038 625.0533977497636 1652767.7194837728 0.024349479132482435 0.0466059296985077 9.785990832538098e-06 5.0093951954205505 0.11466938213322442 KPPAPPSPVQS(ph)QSPSTNWS(ph)PAVPVK ddPTM_KYSE-520_SHP099_60min_R1 1 KPPAPPSPVQSQSPSTNWSPAVPVK 25 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KPPAPPS(0.466)PVQS(0.508)QS(0.026)PS(0.001)T(0.001)NWS(0.998)PAVPVK 102.09 0.0014261 688990000.0 326840.0 257440.0 233720.0 308940.0 263910.0 269520.0 257640.0 294650.0 285060.0 283100.0 True False 308709.53366061335 245072.19597468208 248785.9651652221 338301.5647138016 284678.21555750485 267837.82570663217 283684.76552409003 293627.92792182707 233300.2897778194 280591.954248467 1.1002080743457383 0.8734113443526188 0.8866468243238351 1.2056709381418405 1.0145630024210153 0.9545456370051832 1.0110224517445867 1.0464588291858739 0.8314575177420435 1.0 18.098114115852734 -9.221461511495495 8.590146566900781 1.000001380831559 0.9930668495577267 0.000383803994349341 0.10656409052925118 0.0 0.0 0.10256489377623086 0.024875640618803256 6.005352278168609e-10 9.221461511495495 -0.006934531273832367 KPPEADMNIFEDIGDYVPS(ph)TTKTPR ddPTM_KYSE-520_SHP099_60min_R1 1 KPPEADMNIFEDIGDYVPSTTKTPR 25 2 Q13123 Q13123 IK Protein Red 1 KPPEADMNIFEDIGDY(0.001)VPS(0.25)T(0.25)T(0.25)KT(0.25)PR 52.09 0.043223000000000004 24788000.0 67115.0 75089.0 62976.0 54462.0 69909.0 59929.0 49608.0 56738.0 81465.0 61640.0 True False 63391.99715956441 71481.61172911315 67035.53372516266 59638.05210540264 75410.4405722012 59554.96088146618 54622.86076742373 56541.189120748786 66673.00956553018 61093.91755519434 1.037615522073763 1.170028287423772 1.0972538086889003 0.9761700426482486 1.234336306950243 0.9748099854238711 0.8940801793906171 0.9254798412569882 1.091319925675015 1.0 15.898741133574411 -6.47579161865316 24.7005033429131 0.9662149422998314 1.0999405793124069 0.372483511813521 0.08114230409877411 364.89324039796065 191412.17956007132 0.028033523986257122 0.024722423098068536 3.343554305567599e-07 6.47579161865316 0.13372563701257545 KPPEADMNIFEDIGDYVPSTTKT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 KPPEADMNIFEDIGDYVPSTTKTPR 25 2 Q13123 Q13123 IK Protein Red 1 KPPEADMNIFEDIGDYVPS(0.032)T(0.032)T(0.159)KT(0.778)PR;KPPEADMNIFEDIGDYVPS(0.051)T(0.051)T(0.226)KT(0.672)PR 162.0 3.1494e-10 1006950000.0 683250.0 731710.0 647590.0 513410.0 580480.0 544880.0 456520.0 502580.0 813310.0 567370.0 True False 645348.7604748929 696557.5532808992 689334.6875806355 562204.3320376553 626160.4735205955 541479.2018070264 502669.4968058436 500836.6672830542 665633.4058766515 562343.5432071808 1.1476058865979208 1.2386690692814992 1.2258248465861163 0.9997524446200066 1.1134838855790028 0.9628975176256848 0.8938832905220149 0.8906240203749152 1.1836775115801699 1.0 19.10109223594631 -5.445116428047222 1.52302945384333 0.9847602734469979 1.2126528892856645 0.4749571884997944 0.09104465448463353 0.3368993370037885 1.5587907661166427 0.03136565434418004 0.058183550756737694 3.5882572578041763e-06 5.445116428047222 0.2278926158386666 KPPQHLS(ph)PDTTGPPPPPLETLEAEFGSLK ddPTM_KYSE-520_SHP099_60min_R1 3 KPPQHLSPDTTGPPPPPLETLEAEFGSLK 29 1 A0A3B3ISF0;A0A3B3IT29;A0A3B3ISF8 A0A3B3ISF0 1 KPPQHLS(0.657)PDT(0.172)T(0.172)GPPPPPLETLEAEFGSLK;KPPQHLS(0.787)PDT(0.107)T(0.107)GPPPPPLETLEAEFGSLK;KPPQHLS(0.71)PDT(0.144)T(0.144)GPPPPPLET(0.001)LEAEFGSLK 203.64 3.4792e-16 1402850000.0 624240.0 671690.0 572640.0 500150.0 508790.0 613780.0 513170.0 613920.0 709990.0 666740.0 True False 589612.1628084114 639421.0041727549 609553.2906563948 547684.10562442 548828.8783808984 609949.1713498686 565046.2316565637 611790.4548100049 581073.7133914053 660833.2023158707 0.8922253917359673 0.9675981804968677 0.9224011271229005 0.8287781299503068 0.8305104472014172 0.9230001900817325 0.8550512136441929 0.9257864959962713 0.8793046586567524 1.0 19.333926648502114 -10.252885793075098 7.134675156984714 1.0000005047935638 0.8919733320339257 0.36934815206466165 0.04248068481136195 3.628722298254193e-07 3.797212583746121e-08 0.043756839450184916 0.01061254282954686 5.586170756051975e-11 10.252885793075098 -0.10802717275963813 KPPVS(ph)PPLLLVQDSETTGR ddPTM_KYSE-520_SHP099_60min_R1 2 KPPVSPPLLLVQDSETTGR 19 1 Q8IY92-2;Q8IY92 Q8IY92-2 SLX4 Structure-specific endonuclease subunit SLX4 1 KPPVS(1)PPLLLVQDSETTGR;KPPVS(1)PPLLLVQDSETTGR 74.748 0.006472199999999999 108246000.0 146780.0 148724.0 122652.0 107537.0 119487.0 147054.0 116573.0 163731.0 176914.0 162818.0 True False 138637.82080132412 141579.07580072497 130558.3441701388 117757.28414782215 128889.94711196826 146136.18143908842 128357.33648284324 163163.05537610268 144790.87723901315 161375.5591904871 0.8591004827297085 0.8773266318080147 0.8090341860010425 0.7297095343218727 0.798695587848139 0.9055657633172928 0.795395146122039 1.011076622721447 0.8972292828315007 1.0 17.300062569132376 -7.257460316014161 24.99955146226359 0.9656147176495403 0.8248005246582194 0.5997171695301706 0.05405666181805324 246.09454728387692 1546166.874581861 0.02769833170999809 0.015232120062083016 5.527639148564742e-08 7.257460316014161 -0.14081419299132092 KPQSSS(ph)TEPAR ddPTM_KYSE-520_SHP099_60min_R1 1 KPQSSSTEPAR 11 1 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 KPQS(0.017)S(0.148)S(0.687)T(0.148)EPAR 118.51 0.00015755 458240000.0 351850.0 303650.0 382130.0 274440.0 311140.0 341140.0 321810.0 317030.0 402210.0 346650.0 True False 332332.17910441407 289062.1982120577 406762.7112296179 300522.6950866053 335624.9478555649 339010.8187205425 354341.6953629379 315930.2969253584 329178.802888994 343578.9506896193 0.9672658305678182 0.8413268555360055 1.183898811068543 0.8746830807981891 0.976849563053588 0.9867042728900947 1.0313253901373063 0.9195275097360723 0.9580878055197449 1.0 18.390282127135777 -5.96105085904961 24.95046238614991 0.9778527919480693 0.9673927364036766 0.004280090137969483 0.08864718979857059 2252.639509886617 1443010.8143239848 0.02712267002105433 0.030754136367681192 1.0938282635082642e-06 5.96105085904961 -0.010460055544392666 KPRPLS(ph)MDLTAR ddPTM_KYSE-520_SHP099_60min_R1 2 KPRPLSMDLTAR 12 2 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 KPRPLS(0.979)MDLT(0.021)AR;KPRPLS(0.999)MDLT(0.001)AR 143.28 2.3072e-05 3145700000.0 2769200.0 2743800.0 3065200.0 2641700.0 2736800.0 2334250.0 2655300.0 2696200.0 3172200.0 2757100.0 True False 2615586.9557366623 2611983.7294722344 3262787.6964934017 2892766.373743935 2952170.5897380905 2319681.0799039286 2923723.637230693 2686847.5114978096 2596208.44465445 2732674.2389913425 0.9571528572326651 0.9558342857714148 1.1939907252529776 1.0585844197849519 1.0803229113865276 0.8488684991446862 1.0699129795690059 0.98323008032218 0.9500614480900352 1.0 21.381882056333744 KPRPS(ph)EGDEDCLPASK ddPTM_KYSE-520_SHP099_60min_R1 10 KPRPSEGDEDCLPASK 16 2 Q5VU10;P78346;P78346-2 Q5VU10 RPP30 Ribonuclease P protein subunit p30 1 KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(0.995)EGDEDCLPAS(0.005)K;KPRPS(0.948)EGDEDCLPAS(0.052)K;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK;KPRPS(1)EGDEDCLPASK 211.09 1.2341e-16 13459080000.0 14157090.0 12008840.0 11534040.0 12674140.0 14038360.0 14847670.0 14789040.0 17614030.0 19581430.0 18192770.0 True False 13371767.996240774 11431917.300763667 12277542.673516506 13878686.454980869 15143099.06465785 14755000.184066476 16284060.49032133 17552931.041075524 16025935.919680353 18031596.21156089 0.7415742810205297 0.6339936390897072 0.680890506279461 0.7696870699712431 0.839809126545819 0.8182858583870886 0.9030848017703983 0.9734540877652045 0.8887696758318814 1.0 24.104023778373506 -6.11960768229119 0.6136335278169496 0.9704355754338172 0.6574034987552291 0.8603856941269795 0.04266194987447852 0.2896862653486628 0.23986044206871315 0.03317813584136163 0.04257191408517052 7.592631418239434e-07 6.11960768229119 -0.3130320766785881 KPRPS(ph)EGDEDCLPASKK ddPTM_KYSE-520_SHP099_60min_R1 1 KPRPSEGDEDCLPASKK 17 3 Q5VU10;P78346;P78346-2 Q5VU10 RPP30 Ribonuclease P protein subunit p30 1 KPRPS(1)EGDEDCLPASKK 111.49 0.0002043 1044300000.0 405540.0 347320.0 381460.0 291390.0 343230.0 347720.0 265710.0 331020.0 568800.0 307570.0 True False 383043.887776053 330634.22586205136 406049.5219575802 319083.6179904019 370240.24828844034 345549.75049981504 292570.5598797001 329871.7688806486 465520.25828114606 304845.1690858388 1.2565194617474646 1.0845972296479163 1.3319860805904524 1.0467071495581217 1.2145189946709882 1.1335254271407351 0.9597349394023613 1.0820961010137011 1.5270711347571466 1.0 18.21771715806896 -5.277390895017093 24.964559839980055 1.1367015376656944 1.2103905769391305 0.05680588531883013 0.15883218070373847 2950.411467332582 4617465.572847373 0.044466060928743695 0.06617339529614648 5.27969828554058e-06 5.277390895017093 0.07368903927343617 KPRS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 KPRSPPR 7 2 A0A087WZG9;B4DSP0;A0A087WXK2;A0A087WUL4;A0A087WX23;Q86TG7-2;Q86TG7 A0A087WZG9 PEG10 Retrotransposon-derived protein PEG10 1 KPRS(1)PPR 46.891000000000005 0.068263 969830000.0 944300.0 715900.0 500790.0 665180.0 608510.0 846850.0 587270.0 727510.0 673660.0 559910.0 True False 891917.7965846189 681507.0894121927 533071.7246923307 728398.5072063413 656396.2750517124 841564.4950269427 646636.9828028731 724986.4376121111 551340.325586633 554949.6330033889 1.607204948956462 1.2280521490281462 0.9605767676741133 1.3125488582887181 1.1828033320777132 1.516470045168592 1.1652174257747898 1.3064004271675658 0.9934961531603825 1.0 19.081997313442578 -7.765187361902085 24.97026171775697 0.9967478812553345 1.273449691589322 0.31030026244402886 0.17116323140258338 125.07163015989069 833207.2325890195 0.14496104805225477 0.04303058215115687 1.7171674125971397e-08 7.765187361902085 0.27670181033398755 KPS(ph)ASERLPDEKVELFSK ddPTM_KYSE-520_SHP099_60min_R1 1 KPSASERLPDEKVELFSK 18 3 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154;E9PGW9;E7EV93;E5RGQ4;Q15154-3 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 1 KPS(0.5)AS(0.5)ERLPDEKVELFSK 90.35 0.0017510000000000002 1778800000.0 1139600.0 1116000.0 1115100.0 764430.0 800390.0 1015000.0 772820.0 828030.0 1828400.0 940910.0 True False 1076384.1162637207 1062385.6848498483 1186981.1302230826 837081.1973657394 863376.1394038552 1008665.0085048666 850944.1875963646 825157.757193654 1496408.650213163 932574.2694169027 1.1542073929797956 1.1391968658047051 1.2728006434975407 0.8976027162846012 0.9257987998571803 1.081592149369015 0.9124680097901717 0.8848172035773499 1.604599975880528 1.0 19.83085909937868 -5.251255360507595 24.899345713741933 1.030221361308912 1.1837811506208484 0.09482781674896579 0.2019281893498664 1584.9023839144731 3874988.921486747 0.054190457361867846 0.09246178260191648 5.607181827937765e-06 5.251255360507595 0.15355978931193648 KPS(ph)DEEFASR ddPTM_KYSE-520_SHP099_60min_R1 2 KPSDEEFASR 10 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5 B1ALK7 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 KPS(0.999)DEEFAS(0.001)R;KPS(1)DEEFASR 92.38 0.0021578 1681190000.0 1283110.0 1142050.0 1066640.0 1013730.0 1003450.0 1169530.0 1103640.0 1211020.0 1441610.0 1232010.0 True False 1211933.3304836298 1087184.203748002 1135397.321084343 1110074.5944109624 1082415.8061504997 1162230.5294548746 1215206.7016884275 1206819.2542741916 1179849.9640307366 1221095.3498892759 0.9924968845336469 0.890335225538762 0.9298187247927004 0.9090810103499449 0.8864302089502257 0.9517934283840006 0.995177568892239 0.9883087789857042 0.9662226329317533 1.0 20.219744427668747 -6.542282983206015 4.726040483907134 0.9856772947777304 0.9194066125045333 0.5382020223046879 0.02863369013002275 0.1467009214373206 8.47506574208623 0.010717043545277038 0.008494582576745943 2.8689106110423665e-07 6.542282983206015 -0.0662706822731971 KPS(ph)EDEVLNK ddPTM_KYSE-520_SHP099_60min_R1 11 KPSEDEVLNK 10 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK;KPS(1)EDEVLNK 156.08 0.00011039 46180480000.0 41160600.0 38835180.0 37454100.0 41347020.0 43498060.0 49571200.0 54784800.0 62262200.0 74170700.0 62200400.0 True False 38877339.46637816 36969479.66000643 39868451.2146788 45276628.3493651 46921109.85189372 49261807.753297046 60322982.23212301 62046226.96030675 60703170.57119092 61649352.84717897 0.6306203986074309 0.599673442666124 0.6466969947520407 0.7344217945255678 0.7610965514626776 0.7990644747790119 0.9784852467414562 1.0064376038806373 0.9846521945115382 1.0 25.87758241449146 -6.300950516438289 0.7888688192671219 1.022224134745557 0.6137181190379793 0.9600539306060094 0.03126560458242145 0.11919660574387637 0.160619486665976 0.02294437659795653 0.02119627993400953 5.000915122136045e-07 6.300950516438289 -0.4085060157075776 KPS(ph)GLNGEASK ddPTM_KYSE-520_SHP099_60min_R1 7 KPSGLNGEASK 11 1 P16070;P16070-14;H0YD13;P16070-8;P16070-7;P16070-5;P16070-3;P16070-6;P16070-17;P16070-4;P16070-16;P16070-10;P16070-11;P16070-13;P16070-12;P16070-18;H0Y2P0;H0YE40;J3KN83 P16070 CD44 CD44 antigen 1 KPS(1)GLNGEASK;KPS(1)GLNGEASK;KPS(0.999)GLNGEAS(0.001)K;KPS(0.999)GLNGEAS(0.001)K;KPS(1)GLNGEASK;KPS(1)GLNGEASK;KPS(1)GLNGEASK 137.93 9.1739e-05 12163810000.0 11866670.0 13625930.0 11895680.0 20563600.0 17742600.0 17924200.0 16720500.0 21522200.0 24090300.0 15046340.0 True False 11208402.15947982 12971319.869862083 12662494.566560969 22517958.361328214 19138841.67841531 17812328.41915561 18410771.31635439 21447544.51151922 19716108.787043426 14913041.133475374 0.7515839364460858 0.8697970959622247 0.8490886904440575 1.5099507980824949 1.2833627633101783 1.1944128806278278 1.2345417109477184 1.438173764798101 1.3220716425697092 1.0 23.830071152604273 -5.239438129689515 21.838614804088113 1.2957512557587192 0.8281200046833621 0.714903669029863 0.13286503736362856 81.80730165470567 81201.3613558078 0.03508977710759538 0.060661480263525955 5.7618489696699435e-06 5.239438129689515 -0.4676312510753571 KPS(ph)GSGDQSKPNCTK ddPTM_KYSE-520_SHP099_60min_R1 3 KPSGSGDQSKPNCTK 15 2 H7BZK3;A0A087WWX2;Q8TBM8 H7BZK3 DNAJB14 DnaJ homolog subfamily B member 14 1 KPS(0.984)GS(0.016)GDQSKPNCTK;KPS(0.936)GS(0.058)GDQS(0.006)KPNCTK;KPS(0.984)GS(0.016)GDQSKPNCTK 145.05 5.4015e-06 2912560000.0 1685320.0 1804390.0 1385830.0 1750740.0 1822760.0 2118720.0 2443430.0 3149460.0 3592080.0 2706350.0 True False 1591831.939997871 1717704.3959553912 1475162.8192063973 1917129.8032208264 1966200.841914282 2105496.28258072 2690435.7499787556 3138535.258349487 2939848.8209678945 2682373.8445084365 0.5934414933461988 0.6403672625544007 0.5499467653349159 0.7147138744831274 0.7330077595036354 0.7849376726108684 1.003005511512433 1.1700588509595482 1.0959877300423955 1.0 21.355078890098355 -6.589371970736216 1.270815050021968 1.1114779729305369 0.6224311240716871 0.9153114596809595 0.06106271491259997 0.11601286964034459 0.3819380479390642 0.035826289894919865 0.024171662210517274 2.5741154973903993e-07 6.589371970736216 -0.48904684885884975 KPS(ph)IILSK ddPTM_KYSE-520_SHP099_60min_R1 1 KPSIILSK 8 1 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 KPS(1)IILSK 44.511 0.060271000000000005 296190000.0 1102600.0 855090.0 781810.0 672860.0 829310.0 985930.0 722450.0 801240.0 902180.0 841400.0 True False 1041436.580021392 814010.1928837424 832206.7235402288 736808.4120972635 894571.9788715634 979776.4451578348 795482.296432537 798460.6854508226 738366.85410704 833945.850599294 1.248805997743127 0.9760947815721784 0.9979145803557684 0.883520688504865 1.0726979194496886 1.1748681817335542 0.9538776358931266 0.9574490776313943 0.8853894453416028 1.0 19.669594184715777 -4.25923242000513 24.496471431612473 0.9920551523574626 1.2488061172704308 0.47845371499754774 0.08129480638429099 144.90735968877436 1608276.527347575 0.021584813705696284 0.13856612701938384 5.505130012541215e-05 4.25923242000513 0.2567509649129682 KPS(ph)LVASK ddPTM_KYSE-520_SHP099_60min_R1 4 KPSLVASK 8 1 P56211;H3BMD8;P56211-2;H3BQ52 P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 KPS(1)LVASK;KPS(0.999)LVAS(0.001)K;KPS(1)LVASK;KPS(0.998)LVAS(0.002)K 128.88 0.00091242 13780700000.0 23087900.0 18399300.0 16502600.0 13142700.0 11472900.0 14508500.0 15964800.0 14651700.0 15278200.0 19512700.0 True False 21807168.162412412 17515370.010087643 17566384.00109358 14391778.25650317 12375751.958128516 14417947.06984519 17578677.785433106 14600876.672432503 12504064.012079833 19339832.658650897 1.1275779137963664 0.9056629557884435 0.9083007237519175 0.7441521604927428 0.6399099814647424 0.7455052649277139 0.9089363954537627 0.7549639611747823 0.6465445814747856 1.0 24.205071975904318 -4.307325855069162 1.1841334808092943 0.7692607179223498 1.262998036083734 0.48558379965193876 0.10753736950237942 1.206314397678983 1.5226672238667396 0.03308154865244258 0.7224621909005232 4.928039099838143e-05 4.307325855069162 0.4937373181613842 KPS(ph)LVSDLPWEGAAPQSPSFSGSEDSGSPK ddPTM_KYSE-520_SHP099_60min_R1 1 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPS(0.38)LVS(0.38)DLPWEGAAPQS(0.068)PS(0.068)FS(0.068)GS(0.028)EDS(0.004)GS(0.004)PK 53.361000000000004 0.038903 224380000.0 59735.0 68903.0 61305.0 47801.0 65697.0 51327.0 51426.0 57229.0 84519.0 51922.0 True False 56421.38047122976 65592.79645448853 65256.8183914681 52343.9926681053 70866.9801352029 51006.64915421605 56624.64194939394 57030.485956349024 69172.48015060512 51462.011474704734 1.0963695132469262 1.2745867208616504 1.2680580591674688 1.0171384904733871 1.3770736530583603 0.9911514861654308 1.100319251555622 1.1082055349581774 1.3441464522739393 1.0 15.651220227757328 -6.283813567844769 24.869664138685636 1.1149995882715023 1.2033035257799172 0.12435298637761538 0.12918825254065697 1884.5849884102377 2094772.714171029 0.04433944857048572 0.03913825215885829 5.202192662024146e-07 6.283813567844769 0.08830393750841492 KPS(ph)PAAS(ph)PATK ddPTM_KYSE-520_SHP099_60min_R1 4 KPSPAASPATK 11 1 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 2 KPS(1)PAAS(1)PATK;KPS(1)PAAS(0.998)PAT(0.002)K;KPS(1)PAAS(0.983)PAT(0.017)K;KPS(1)PAAS(0.973)PAT(0.027)K 160.87 2.3500999999999997e-05 4500600000.0 9047650.0 7772740.0 7066940.0 6926720.0 6851100.0 5631930.0 5611490.0 5814800.0 7193290.0 5272780.0 True False 8545758.81845689 7399325.903279407 7522486.2599037895 7585033.386205689 7390242.592573308 5596779.035811637 6178754.172064797 5794629.8159845285 5887169.86408437 5226067.271360766 1.635217913341506 1.4158497239077381 1.4394162702664715 1.451384567468588 1.4141116462607328 1.0709351306062205 1.1822951851241612 1.1087935755705876 1.126500972604485 1.0 22.317294264864987 -6.1853052837158105 4.0767216917073545 1.1090056443091865 1.4725491777445772 0.8717460673722175 0.07178045828070058 0.0810269124267782 2.5718707146596267 0.024158628863211535 0.023885311548152904 6.526716012517584e-07 6.1853052837158105 0.3635435334353907 KPS(ph)PAAS(ph)PATKK ddPTM_KYSE-520_SHP099_60min_R1 1 KPSPAASPATKK 12 2 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 2 KPS(0.995)PAAS(0.62)PAT(0.385)KK 57.525 0.038995999999999996 688920000.0 661070.0 588540.0 540370.0 512010.0 588470.0 516410.0 448360.0 445040.0 622150.0 450410.0 True False 624399.1292896263 560265.6549834491 575203.1148225694 560671.2764585797 634779.2410637137 513186.8936374368 493684.6043719175 443496.26011311705 509183.2431252025 446419.71781367733 1.39868178840217 1.2550199568409024 1.288480530473886 1.2559285669648392 1.4219336999102987 1.1495614399622602 1.1058754456226039 0.9934513248767823 1.1405930849535657 1.0 18.76804122508906 -6.501451829672221 3.454296822695234 1.0618905852747809 1.3143088245954178 0.778706339158902 0.06657694171331911 0.11275949885048041 2.820126735892349 0.025196927972968505 0.020471065673352645 3.151723938308934e-07 6.501451829672221 0.2524182393206369 KPS(ph)PAASPAT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 3 KPSPAASPATK 11 1 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 2 KPS(1)PAAS(0.314)PAT(0.686)K;KPS(1)PAAS(0.4)PAT(0.6)K;KPS(1)PAAS(0.337)PAT(0.663)K 125.73 0.00050723 1963770000.0 2270570.0 1919960.0 1697350.0 1654460.0 1766990.0 1483860.0 1382230.0 1428630.0 1753530.0 1368420.0 True False 2144616.9558309233 1827722.2396812853 1806763.8968560242 1811699.3809684615 1906042.0602021709 1474598.6793300794 1521959.297664814 1423674.4159747488 1435133.154894054 1356296.8634146517 1.5812297541052882 1.3475827372185758 1.3321301151631832 1.3357690560511033 1.4053280750081991 1.0872241314615942 1.1221431964629673 1.0496775848839357 1.0581261327117735 1.0 20.371241556428103 -6.141732539129799 0.5282445227503444 0.9880526401619892 1.4945351500889015 0.8329270201334511 0.07497820422176052 0.4147526244039245 0.24739607978316186 0.06647916720281534 0.09383473021617171 7.215517110190133e-07 6.141732539129799 0.5064825099269122 KPS(ph)PAASPATK ddPTM_KYSE-520_SHP099_60min_R1 3 KPSPAASPATK 11 1 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KPS(1)PAASPATK;KPS(1)PAASPATK;KPS(0.976)PAAS(0.024)PATK 185.66 1.0875e-06 2829490000.0 7848100.0 7489700.0 6345100.0 5400000.0 6327400.0 6056500.0 5389300.0 6048400.0 7968100.0 6343800.0 True False 7412750.248200524 7129883.569731112 6754115.298518945 5913214.376430793 6825330.3820187105 6018699.1369553935 5934103.038499371 6027419.512107174 6521293.899454989 6287598.86740171 1.1789477039688716 1.133959675242048 1.0741962776181393 0.9404566832480477 1.0855225541509796 0.957233319727116 0.9437788834247918 0.958620236312554 1.037167611513018 1.0 22.584077749632197 -4.891501302770235 2.0760825156905707 0.9874367619479514 1.170470600672287 0.701206892035683 0.044006401109533556 0.17943909958236842 1.5116020297282629 0.01261354051875185 0.03834939676871521 1.2838039193895984e-05 4.891501302770235 0.18303383872433554 KPS(ph)PAQAAETPALELPLPSVPAPAPL ddPTM_KYSE-520_SHP099_60min_R1 1 KPSPAQAAETPALELPLPSVPAPAPL 26 1 A0A5H1ZRP4;Q8WX92;Q8WX92-2 A0A5H1ZRP4 NELFB Negative elongation factor B 1 KPS(0.98)PAQAAET(0.02)PALELPLPSVPAPAPL 116.24 0.00020709999999999997 34140000.0 37579.0 51486.0 42139.0 34568.0 45333.0 59661.0 44942.0 45390.0 59835.0 45905.0 True False 35494.41795812075 49012.53527793846 44855.347364783884 37853.332326751806 48900.44919051328 59288.633568875695 49485.17595165211 45232.552684105634 48970.47231760261 45498.317413549565 0.7801259469773355 1.077238413729611 0.9858682675466544 0.8319721360834093 1.0747748921359133 1.3030950799780416 1.0876265049950011 0.9941588009282123 1.0763139188751412 1.0 15.473525573124242 -5.901646375964157 7.837555473714777 1.1021415312779916 0.9355799404093051 0.3612672496784941 0.10995372437344796 0.2869673708164581 20.186270896837346 0.035205095250356006 0.039987249620340434 1.2541619599635673e-06 5.901646375964157 -0.1665615908686865 KPS(ph)PEPEGEVGPPK ddPTM_KYSE-520_SHP099_60min_R1 12 KPSPEPEGEVGPPK 14 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK;KPS(1)PEPEGEVGPPK 180.1 6.176899999999999e-09 29421060000.0 13832670.0 12348100.0 9759680.0 9299700.0 9896000.0 11568190.0 9990350.0 11762370.0 13739840.0 11317660.0 True False 13065344.22035601 11754878.741124023 10388804.588840114 10183540.691943252 10674758.899462186 11495988.635207787 11000272.074420083 11721569.083827808 11245031.40918008 11217394.33740623 1.1647396737036775 1.047915263344667 0.9261334919997376 0.9078347774567019 0.9516255360539 1.0248359190576495 0.9806441445798053 1.0449457985746589 1.0024637692981597 1.0 23.419234258779127 -4.397105649814174 3.219093058368645 0.979613472310043 1.1685765005225484 0.658794641407008 0.04067223367452165 0.18440241709393773 3.122764920417572 0.011772030954070438 0.07062369036604679 4.0076921156855004e-05 4.397105649814174 0.18896302821250532 KPS(ph)PEPR ddPTM_KYSE-520_SHP099_60min_R1 2 KPSPEPR 7 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 KPS(1)PEPR;KPS(1)PEPR 98.04799999999999 0.0036847 21311900000.0 10587500.0 8285600.0 7962600.0 8260700.0 8631800.0 8194800.0 8795100.0 8585400.0 9197700.0 8599000.0 True False 10000190.269342009 7887547.339060851 8475881.936610464 9045794.444329973 9311073.551776255 8143653.213493279 9684194.539904214 8555619.25124742 7527629.535148553 8522819.54992077 1.173342954261536 0.9254622009607344 0.9944927130000374 1.0613617232356005 1.092487468171588 0.9555116315432238 1.1362665234410885 1.00384845662102 0.883232302532855 1.0 23.022899356319893 -7.531803636216774 22.84123539280502 0.9422573611895922 1.0423645110961615 0.2320405168230908 0.07691917649964612 105.82988651232245 270825.9758498121 0.04928261196282274 0.01871421180107224 2.9389781938896992e-08 7.531803636216774 0.10010714990656921 KPS(ph)PQAEEMLK ddPTM_KYSE-520_SHP099_60min_R1 3 KPSPQAEEMLK 11 1 Q15013;Q15013-3 Q15013 MAD2L1BP MAD2L1-binding protein 1 KPS(1)PQAEEMLK;KPS(1)PQAEEMLK;KPS(1)PQAEEMLK 151.1 3.4287e-05 2556730000.0 2281950.0 2203540.0 1731020.0 1843330.0 1967970.0 2187980.0 1878650.0 2161170.0 2514830.0 2164000.0 True False 2155365.684545454 2097678.630819028 1842604.3189299265 2018519.528982626 2122838.0427823965 2174324.005230026 2068562.275857132 2153673.4056908684 2058200.2657053 2144828.6435665246 1.0049127658801722 0.9780168859228336 0.8590916222873428 0.941109927376825 0.9897471525988384 1.0137518499447373 0.9644417431955901 1.0041237616584775 0.9596105832878217 1.0 21.032430960661166 -5.761364570484729 23.93658083053426 0.9888671386618751 0.9418929973813454 0.22966634877866 0.03816068941790261 1.75463836603101 560796.7231430672 0.01214557714213047 0.014689777415051902 1.7323491587970725e-06 5.761364570484729 -0.04697414128052979 KPS(ph)PQPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 3 KPSPQPSSPR 10 1 G3V5E1;O75909-1;O75909;O75909-4 G3V5E1 CCNK Cyclin-K 2 KPS(0.991)PQPS(0.564)S(0.445)PR;KPS(0.992)PQPS(0.579)S(0.429)PR;KPS(1)PQPS(0.589)S(0.412)PR 89.43 0.004211600000000001 15671400000.0 9197800.0 7880200.0 7659700.0 7540600.0 8124900.0 8209000.0 7708600.0 7858200.0 8795200.0 7829300.0 True False 8687579.698640285 7501623.363578654 8153456.517953326 8257256.356835932 8764283.405642712 8157764.586026062 8487860.516686078 7830941.7383176675 7198213.388949261 7759938.493103226 1.1195423399762146 0.9667117039968611 1.050711487623239 1.0640878615435811 1.1294269166478723 1.0512666554350154 1.0938051279955125 1.009149975257864 0.9276121705535157 1.0 22.887613786679022 -7.49938082863727 5.026855284392918 0.9639446070108312 1.0645148806530649 0.4635882358453164 0.045491385813103 0.16232018093409326 11.46686824653476 0.028669441219249713 0.011994208897074789 3.166789318185359e-08 7.49938082863727 0.1005702736422337 KPS(ph)PQPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 KPSPQPSSPR 10 1 G3V5E1;O75909-1;O75909;O75909-4 G3V5E1 CCNK Cyclin-K 2 KPS(0.994)PQPS(0.02)S(0.986)PR;KPS(0.998)PQPS(0.004)S(0.998)PR;KPS(1)PQPSS(1)PR;KPS(0.999)PQPS(0.005)S(0.996)PR;KPS(1)PQPS(0.004)S(0.996)PR;KPS(1)PQPS(0.259)S(0.741)PR;KPS(0.999)PQPS(0.032)S(0.969)PR 163.33 7.5406e-05 23096230000.0 17686700.0 15248180.0 14398550.0 13624540.0 14212970.0 14259400.0 14023990.0 14060150.0 16221260.0 14055820.0 True False 16705583.49343768 14515634.544815209 15326703.571494535 14919412.18523267 15331449.878262857 14170401.795344142 15441671.770152848 14011378.621313665 13275888.088687794 13931296.370062502 1.199140629104478 1.0419442784957482 1.100163485462177 1.0709277721844728 1.1005041792958479 1.0171631856024155 1.1084159980499768 1.005748370368694 0.9529542503464976 1.0 23.731826177688337 -1.0000000000734686 0.16243807225646303 0.9676002147614368 1.6663728833104223 0.5289341929847609 0.04616357375058965 53.63017685733636 0.5608749859746521 0.1329787772993648 9.003229514787677 0.09999999998308323 1.0000000000734686 0.6987726685489856 KPS(ph)PS(ph)ESPEPWKPFPAVS(ph)PEPR ddPTM_KYSE-520_SHP099_60min_R1 2 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 3 KPS(0.9)PS(0.591)ES(0.509)PEPWKPFPAVS(1)PEPR;KPS(0.88)PS(0.56)ES(0.56)PEPWKPFPAVS(1)PEPR 138.88 9.6653e-08 80783000.0 449120.0 434870.0 386000.0 374620.0 419140.0 441410.0 367820.0 373110.0 455780.0 400500.0 True False 424206.41830147605 413978.1924468219 410882.177621837 410223.77216639044 452123.9334196222 438654.99645727425 405002.83517726534 371815.76849452883 373021.841278799 396951.8815842852 1.0686595478736984 1.0428926317078597 1.0350931603648137 1.0334345072988078 1.1389892689641332 1.105058363010012 1.0202819383569812 0.9366771786307324 0.9397155136033658 1.0 18.59860460924306 -7.0476772982087805 4.149089402836521 0.9552416655516188 1.0691344941663534 0.6757415777928342 0.03464804551379912 0.13981378529396554 5.057055321572793 0.018484428217855918 0.01069136818559703 8.960303120829075e-08 7.0476772982087805 0.1138928286147346 KPS(ph)PS(ph)ESPEPWKPFPAVSPEPR ddPTM_KYSE-520_SHP099_60min_R1 1 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 KPS(0.992)PS(0.586)ES(0.422)PEPWKPFPAVSPEPR 79.017 0.0067346 171520000.0 188550.0 174010.0 170040.0 149850.0 165880.0 180270.0 160560.0 174340.0 227440.0 173090.0 True False 178090.75563489363 165650.29840566512 181001.05047361925 164091.69894595482 178933.8122719069 179144.86806223865 176790.97171459362 173735.2552312618 186142.62929582247 171556.55726198223 1.0380877214907798 0.9655725263401169 1.0550517762909781 0.9564874789097807 1.0430018830388332 1.0442321233380103 1.0305113050538661 1.0126995901762734 1.0850219441718336 1.0 17.38832474430526 KPS(ph)PSES(ph)PEPWKPFPAVS(ph)PEPR ddPTM_KYSE-520_SHP099_60min_R1 8 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 3 KPS(0.997)PS(0.032)ES(0.971)PEPWKPFPAVS(1)PEPR;KPS(0.998)PS(0.155)ES(0.847)PEPWKPFPAVS(1)PEPR;KPS(0.972)PS(0.352)ES(0.676)PEPWKPFPAVS(1)PEPR;KPS(0.988)PS(0.02)ES(0.992)PEPWKPFPAVS(1)PEPR;KPS(0.919)PS(0.248)ES(0.833)PEPWKPFPAVS(1)PEPR;KPS(0.999)PS(0.01)ES(0.991)PEPWKPFPAVS(1)PEPR;KPS(0.899)PS(0.102)ES(1)PEPWKPFPAVS(1)PEPR;KPS(0.753)PS(0.295)ES(0.953)PEPWKPFPAVS(1)PEPR 181.88 3.7704e-10 10525332000.0 4431654.0 4135497.0 3790658.0 3805383.0 3853784.0 3987155.0 3579613.0 3654587.0 4455478.0 3896826.0 True False 4185821.318336777 3936821.516612454 4035009.879947239 4167045.456189883 4157054.875768489 3962269.6866849493 3941475.2156962613 3641910.09068402 3646475.508660274 3862303.153324748 1.083763017083094 1.0192937634177055 1.0447159945158166 1.0789017046999034 1.0763150148351284 1.0258826222053927 1.020498666010554 0.9429373992947682 0.9441194447725614 1.0 21.881029975620407 -6.969215229089582 2.0497343231565717 0.9578333169082233 1.0565814403088434 0.7279694611766468 0.025184944724378256 0.16806942368738081 1.4064374659748005 0.01447779108673496 0.007807896570812354 1.0734572929969799e-07 6.969215229089582 0.09874812340062011 KPS(ph)PSES(ph)PEPWKPFPAVSPEPR ddPTM_KYSE-520_SHP099_60min_R1 6 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 KPS(0.839)PS(0.172)ES(0.989)PEPWKPFPAVSPEPR;KPS(0.871)PS(0.318)ES(0.81)PEPWKPFPAVS(0.001)PEPR;KPS(0.784)PS(0.393)ES(0.824)PEPWKPFPAVSPEPR;KPS(0.923)PS(0.077)ES(1)PEPWKPFPAVSPEPR;KPS(0.91)PS(0.307)ES(0.783)PEPWKPFPAVSPEPR;KPS(0.961)PS(0.256)ES(0.783)PEPWKPFPAVSPEPR 152.2 2.3019999999999998e-07 2358000000.0 1932561.0 1858474.0 1634004.0 1771484.0 1775933.0 1775911.0 1737222.0 1860490.0 2334984.0 1717981.0 True False 1825357.9888651557 1769190.1194136534 1739334.5123388404 1939845.306743913 1915688.8234234643 1764826.880708263 1912837.3534128657 1854036.3944316318 1911009.7657565798 1702761.0249089932 1.0719989253704671 1.0390125763585707 1.021478931508784 1.139235205860782 1.1250485507946433 1.0364501271119868 1.1233739352914192 1.0888412215864078 1.1223006269236853 1.0 20.699444542584367 -5.245444851552333 24.996231371444942 1.094977620225117 1.0436483876323952 0.1956763146953574 0.042680784967034834 1186.123849815154 1853669.3685786023 0.011081029919330312 0.0191255406567568 5.682705482420411e-06 5.245444851552333 -0.05132923259272171 KPS(ph)PSESPEPWKPFPAVSPEPR ddPTM_KYSE-520_SHP099_60min_R1 2 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.811)PS(0.168)ES(0.021)PEPWKPFPAVSPEPR;KPS(0.805)PS(0.17)ES(0.025)PEPWKPFPAVSPEPR 82.367 0.0027628 1234090000.0 1250240.0 1186050.0 1135510.0 916060.0 1010030.0 1145230.0 1046910.0 1113750.0 1332740.0 1096380.0 True False 1180886.694908349 1129070.3777026555 1208706.7914802365 1003122.0669765178 1089513.6147154192 1138082.1947685003 1152741.879656983 1109886.661201204 1090748.011641376 1086666.9261707324 1.0867052879483823 1.0390215718457054 1.1123065976982995 0.9231182460953189 1.0026196514093957 1.0473146530546837 1.0608051573991397 1.021367849219719 1.0037555992294942 1.0 20.051478377585614 -5.21840682048504 24.99999502169975 1.0128769908733488 1.0753121844654854 0.41240443741530686 0.03844662874944581 558.3579896992601 324380.1877397236 0.010931452653268501 0.01893379417915944 6.047740939829728e-06 5.21840682048504 0.06243519359213656 KPS(ph)QTASYER ddPTM_KYSE-520_SHP099_60min_R1 1 KPSQTASYER 10 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 KPS(0.848)QT(0.136)AS(0.015)YER 79.492 0.010531 1459900000.0 4576000.0 4600400.0 4500100.0 3987500.0 4550600.0 3681200.0 3693400.0 3445400.0 3849300.0 4067600.0 True False 4322160.157970155 4379389.878658819 4790183.646414574 4366470.80111441 4908706.330627796 3658224.265328192 4066764.916110361 3433448.711562403 3150364.152956429 4031564.2285449123 1.0720801934315518 1.0862756067858668 1.1881699942911403 1.0830711241552944 1.2175686786464681 0.9073957545874278 1.008731272917895 0.8516418236009641 0.7814247707256472 1.0 21.942908275797603 -6.2768634573841275 24.49855248294965 0.9067470956409144 1.1277229696418678 0.6812632712775893 0.07508226402101811 376.6870101789615 598302.0764216704 0.026811806079008307 0.02373460216294643 5.286114216070967e-07 6.2768634573841275 0.22097587400095342 KPS(ph)SETDIENWASK ddPTM_KYSE-520_SHP099_60min_R1 1 KPSSETDIENWASK 14 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 KPS(0.497)S(0.497)ET(0.007)DIENWASK 208.37 7.3493e-14 753350000.0 1701600.0 1613800.0 1611400.0 1500100.0 1734000.0 1576300.0 1659400.0 1655800.0 1831400.0 1718400.0 True False 1607208.8559444975 1536270.6256368146 1715273.4223311616 1642669.052978488 1870455.9348895953 1566461.7270012042 1827148.3461833368 1650056.416266627 1498863.9258370085 1703176.3128949683 0.9436538330037303 0.9020032829282035 1.0071026759499908 0.9644738718720005 1.0982162684674108 0.9197296340615588 1.0727887256003739 0.9688112755994998 0.8800403777864427 1.0 20.6997963599324 -4.764012540172231 24.986960139012773 0.991339584072981 0.92282854988625 0.15437789643485278 0.061637849752853836 107.52152593456107 1044144.7807306696 0.0156179072232068 0.035077924595224116 1.7218188570695896e-05 4.764012540172231 -0.06851103418673099 KPS(ph)VPDSASPADDSFVDPGER ddPTM_KYSE-520_SHP099_60min_R1 3 KPSVPDSASPADDSFVDPGER 21 1 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 KPS(1)VPDSASPADDSFVDPGER;KPS(1)VPDSASPADDSFVDPGER;KPS(0.963)VPDS(0.017)AS(0.019)PADDSFVDPGER 151.12 4.6181000000000003e-07 1933340000.0 647180.0 673800.0 589640.0 513990.0 538270.0 668950.0 756170.0 809820.0 873050.0 727620.0 True False 611279.635278655 641429.6366055802 627649.1378573568 562839.4550632718 580628.7866626432 664774.8349155963 832611.0431080238 807010.9234334083 714526.1277994988 721173.8528797945 0.847617579086777 0.8894244210937774 0.8703159929481991 0.7804490592881853 0.8051162481058816 0.9217955313562944 1.154521950266552 1.119024102455807 0.9907820769516948 1.0 19.45998756532176 -6.5794725633853295 4.980627987004707 1.0746837400719318 0.8415958066858581 0.7953364024618328 0.05431296731946773 0.08838235650443804 4.5665103389711375 0.022016491294415328 0.017029328918101036 2.6334643078966024e-07 6.5794725633853295 -0.2330879333860737 KPS(ph)VSEEVQATPNK ddPTM_KYSE-520_SHP099_60min_R1 10 KPSVSEEVQATPNK 14 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 KPS(0.918)VS(0.082)EEVQATPNK;KPS(0.989)VS(0.011)EEVQATPNK;KPS(0.803)VS(0.197)EEVQATPNK;KPS(0.994)VS(0.006)EEVQATPNK;KPS(0.995)VS(0.005)EEVQATPNK;KPS(0.5)VS(0.5)EEVQATPNK;KPS(0.949)VS(0.051)EEVQATPNK;KPS(0.999)VS(0.001)EEVQATPNK;KPS(0.999)VS(0.001)EEVQATPNK;KPS(0.999)VS(0.001)EEVQATPNK 229.4 9.871e-19 51459840000.0 17157220.0 15284880.0 15474190.0 13821400.0 14593520.0 17709170.0 18108980.0 20408100.0 23572270.0 18884790.0 True False 16205474.804529883 14550571.42172738 16471681.046979394 15134981.700444553 15741946.998229526 17598640.501146942 19939612.425013334 20337309.064386364 19292139.976569843 18717485.452744313 0.865793369811535 0.7773785350849043 0.8800156991474705 0.8086012268397675 0.841028942588091 0.9402246121989999 1.0652933309527342 1.0865406635806711 1.030701480990935 1.0 24.157883297395507 -6.50349316350358 2.5543180110871653 1.053265880598425 0.8318084302552404 0.8903239072511298 0.03481586400623243 0.08109939641143524 1.060592091914256 0.013887703415107765 0.01102420566326293 3.1369445103416703e-07 6.50349316350358 -0.22145745034318454 KPSAPS(ph)PPDQTPEEDLVIVK ddPTM_KYSE-520_SHP099_60min_R1 4 KPSAPSPPDQTPEEDLVIVK 20 1 Q15776;Q15776-2 Q15776 ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 1 KPSAPS(1)PPDQTPEEDLVIVK;KPS(0.078)APS(0.922)PPDQTPEEDLVIVK;KPS(0.027)APS(0.972)PPDQT(0.002)PEEDLVIVK;KPS(0.004)APS(0.996)PPDQTPEEDLVIVK 170.59 3.4202e-09 3466160000.0 3916870.0 5062340.0 3629960.0 3325380.0 3727140.0 4301690.0 3804990.0 3716110.0 4941690.0 3963620.0 True False 3699593.413013231 4819137.587672748 3863953.0297413543 3641423.1153880423 4020444.7134742886 4274841.557079115 4189635.5223238156 3703219.6817565933 4044403.665867364 3928505.410449697 0.9417305123654488 1.2267101821608792 0.9835682087807145 0.926923278685572 1.0234031249594402 1.0881597733601627 1.0664706000351993 0.9426535781027943 1.0295018698738154 1.0 21.905549116655965 -4.411708277185748 0.2727093927066915 1.001241039638761 1.091632317499835 0.0065078091357877454 0.0846059544951475 40.27255848039749 2.673890561756776 0.11470038635064772 1.2209110818493065 3.8751785969700634e-05 4.411708277185748 0.09039127786107404 KPSDEEFAS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 KPSDEEFASR 10 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5 B1ALK7 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 KPS(0.058)DEEFAS(0.942)R 80.245 0.011169 700900000.0 746860.0 690930.0 629870.0 641980.0 686150.0 735980.0 713660.0 748530.0 878800.0 729480.0 True False 705430.1869715012 657736.6856929263 670472.4280276323 702993.5861816757 740146.1013405409 731386.4758220802 785803.7174504031 745933.5241382144 719232.0727452019 723017.3747268514 0.9756752902902307 0.9097107603277342 0.9273254716471094 0.9723052457034792 1.023690615485085 1.0115752420173727 1.0868393276818165 1.0316951572844575 0.994764576739142 1.0 19.463670791227422 -5.619958535105137 2.463245006769214 1.0300009044877347 0.9349924739724688 0.655834768856973 0.028511467238306696 0.16692270949385166 2.055458687820284 0.009257712819425414 0.012889248327522225 2.399061962001782e-06 5.619958535105137 -0.09500843051526597 KPSDGS(ph)PDTKPSR ddPTM_KYSE-520_SHP099_60min_R1 8 KPSDGSPDTKPSR 13 2 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 KPS(0.003)DGS(0.937)PDT(0.049)KPS(0.01)R;KPS(0.005)DGS(0.986)PDT(0.008)KPSR;KPS(0.073)DGS(0.639)PDT(0.288)KPSR;KPSDGS(0.998)PDT(0.002)KPSR;KPS(0.022)DGS(0.964)PDT(0.014)KPSR;KPS(0.027)DGS(0.969)PDT(0.004)KPSR;KPS(0.009)DGS(0.991)PDTKPSR;KPS(0.004)DGS(0.659)PDT(0.335)KPS(0.002)R 192.96 1.284e-08 18785100000.0 12729420.0 10628660.0 10252770.0 8737540.0 9619210.0 9875250.0 9480510.0 8971220.0 10248330.0 9463520.0 True False 12023293.697130335 10118043.219656095 10913679.95921202 9567953.174562804 10376187.101181857 9813614.901712006 10438892.471661199 8940100.931718487 8387491.611375553 9379680.57530715 1.2818446854984311 1.0787193805184316 1.1635449492750598 1.0200723892188077 1.1062409874061276 1.046263230706089 1.112926222577613 0.953134902616418 0.8942193227194086 1.0 23.16110736197239 -1.0000000000000444 0.2375779940166675 0.9563846286382565 2.592973397305143 0.6157043361120406 0.06477697427149122 35.6848901143434 0.4743236531394934 0.09142582294299445 22.95833744204931 0.09999999999998978 1.0000000000000444 1.6365887686668867 KPSDS(ph)LSVASSSR ddPTM_KYSE-520_SHP099_60min_R1 4 KPSDSLSVASSSR 13 1 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 KPS(0.004)DS(0.485)LS(0.485)VAS(0.006)S(0.01)S(0.01)R;KPS(0.005)DS(0.869)LS(0.125)VAS(0.002)SSR;KPSDS(0.773)LS(0.227)VASSSR;KPS(0.003)DS(0.786)LS(0.205)VAS(0.005)SSR 187.08 3.045e-08 3660580000.0 2246680.0 2103030.0 2002780.0 1932080.0 1907210.0 1969070.0 1764860.0 2024190.0 2338970.0 2159310.0 True False 2122052.1817544545 2001997.2820876127 2131882.4033613 2115704.3022989687 2057296.5764595063 1956780.3037405675 1943269.272173749 2017168.557339497 1914272.0086354655 2140180.193317759 0.9915296797812142 0.9354339827732301 0.9961228545230131 0.9885636307189409 0.9612725988601154 0.9143063326397389 0.907993298060219 0.942522766838821 0.8944443157694656 1.0 21.029300839343932 -6.095197921912194 4.516320119599898 0.9270239083361876 0.9761192185166389 0.32522970335832424 0.031015091790303054 0.24649656174950896 8.523701556951023 0.009877376855420427 0.010008351798889474 8.031600130132449e-07 6.095197921912194 0.04909531018045121 KPSGDS(ph)QPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 KPSGDSQPSSPR 12 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 2 KPS(0.396)GDS(0.587)QPS(0.476)S(0.541)PR 53.995 0.047921 0.0 149900.0 161060.0 137450.0 158220.0 184440.0 200750.0 199600.0 197930.0 252250.0 217560.0 True False 141584.74818175842 153322.43584401123 146310.24692777594 173257.18122942257 198954.37867995215 199497.04478556843 219777.5159082762 197243.42702720917 206447.75870502667 215632.5876591187 0.6566018138482005 0.7110355512979789 0.6785163991959763 0.8034832912329327 0.9226545061661451 0.9251711299821805 1.0192221792362386 0.9147199371322302 0.957405190681977 1.0 17.71821569752494 -5.598596059455519 1.6597774247953843 0.9623993310659347 0.6772576216018642 0.9395538774490548 0.031608357602661855 0.07960900205737041 0.4480538337469822 0.01057276154714498 0.01635588628380085 2.5200197272507278e-06 5.598596059455519 -0.28514170946407047 KPSGLNGEAS(ph)KSQEMVHLVNK ddPTM_KYSE-520_SHP099_60min_R1 1 KPSGLNGEASKSQEMVHLVNK 21 2 P16070;P16070-14;H0YD13;P16070-8;P16070-7;P16070-5;P16070-3;P16070-6;P16070-17;P16070-4;P16070-16;P16070-10;P16070-11;P16070-13;P16070-12;P16070-18;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 KPS(0.009)GLNGEAS(0.6)KS(0.391)QEMVHLVNK 103.63 0.00053855 663140000.0 602140.0 635200.0 740080.0 910210.0 860550.0 790640.0 662010.0 850860.0 1520000.0 609850.0 True False 568738.0938636686 604684.0385453627 787786.7409698674 996716.0847353835 928270.3891402786 785705.322486984 728932.4313949809 847908.5652522176 1244006.3160818259 604447.2034561209 0.9409226986438617 1.0003918209694536 1.3033177032922707 1.6489712898601223 1.5357344426983774 1.2998741957849447 1.2059488855719336 1.4027835026848139 2.058089290460474 1.0 19.205256804583655 -4.837876562393404 3.28907434966931 1.455503349377664 0.9556760627195718 0.33620934305243433 0.2658191379262169 0.2630876063789438 5.614093736759792 0.07127133293829595 0.18137851945193356 1.452524403532539e-05 4.837876562393404 -0.49982728665809206 KPSGLNGEASKS(ph)QEMVHLVNK ddPTM_KYSE-520_SHP099_60min_R1 5 KPSGLNGEASKSQEMVHLVNK 21 2 P16070;P16070-14;H0YD13;P16070-8;P16070-7;P16070-5;P16070-3;P16070-6;P16070-17;P16070-4;P16070-16;P16070-10;P16070-11;P16070-13;P16070-12;P16070-18;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 KPSGLNGEAS(0.076)KS(0.923)QEMVHLVNK;KPSGLNGEAS(0.006)KS(0.994)QEMVHLVNK;KPSGLNGEAS(0.006)KS(0.994)QEMVHLVNK;KPSGLNGEAS(0.006)KS(0.994)QEMVHLVNK;KPSGLNGEAS(0.211)KS(0.789)QEMVHLVNK 201.97 8.7017e-14 25727460000.0 8657090.0 10994580.0 9759010.0 15355120.0 12969500.0 11421630.0 10213440.0 11494800.0 21137650.0 9341550.0 True False 8176863.960218937 10466383.873598965 10388091.399568088 16814465.988114845 13990125.863639358 11350343.370531458 11245914.18876868 11454927.221706476 17299585.596794076 9258791.134615934 0.883145957321363 1.1304266098484708 1.121970595138498 1.8160541418037217 1.5110099861022177 1.2258990623620203 1.2146201404979824 1.2371946893671493 1.868449708527925 1.0 23.14239241097997 -5.022521729990283 23.679036617643302 1.4133243390946764 1.0366391046526393 0.29459968773855294 0.26224022949182035 476.292438828312 500769.3368368528 0.07123319750112753 0.12481037080447173 9.494634914638547e-06 5.022521729990283 -0.37668523444203705 KPSGS(ph)PDLWK ddPTM_KYSE-520_SHP099_60min_R1 2 KPSGSPDLWK 10 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.043)GS(0.957)PDLWK;KPS(0.011)GS(0.989)PDLWK 104.7 0.0015087 2458600000.0 1963450.0 1580870.0 1488680.0 1352310.0 1505370.0 1671240.0 1649470.0 1575720.0 1491110.0 1641800.0 True False 1854533.5144594614 1504922.6322657513 1584642.6947722156 1480833.1358131715 1623834.0546163523 1660809.1712449987 1816214.524875875 1570254.1950958138 1220362.0118241925 1627254.9293010726 1.1396699318993662 0.9248229058443445 0.9738134242142628 0.9100191427591551 0.9978977635138032 1.0206201507457335 1.1161216919195096 0.9649712327313451 0.7499513382014176 1.0 20.63400885378754 -7.537821605401152 24.930727302326524 0.8691374465083811 1.0056129105021239 0.2701487045435589 0.08858609001497023 301.47788753350983 502976.5102683805 0.05802535150218848 0.021947699120150457 2.8985339703569693e-08 7.537821605401152 0.13647546399374277 KPSKYPLCSADAAVS(ph)TTPPGS(ph)PPPPPPLPEPPVLK ddPTM_KYSE-520_SHP099_60min_R1 2 KPSKYPLCSADAAVSTTPPGSPPPPPPLPEPPVLK 35 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 2 KPS(0.003)KY(0.002)PLCS(0.003)ADAAVS(0.336)T(0.336)T(0.336)PPGS(0.986)PPPPPPLPEPPVLK;KPS(0.01)KY(0.009)PLCS(0.009)ADAAVS(0.327)T(0.327)T(0.327)PPGS(0.989)PPPPPPLPEPPVLK 81.441 0.00054308 1450030000.0 2526300.0 2428730.0 2220060.0 2397380.0 2242110.0 2159240.0 2082640.0 2202760.0 2954560.0 2262230.0 True False 2386161.102945807 2312050.165201946 2363168.619821595 2625226.2744014184 2418551.3011391656 2145763.382230589 2293173.5758076785 2195119.139688047 2418086.382396525 2242188.4021883104 1.064210795407283 1.031157846925554 1.0539563122863411 1.1708321530158992 1.0786565922733033 0.9569951303540714 1.0227390229873672 0.9790074453804484 1.0784492418373688 1.0 21.096476076496515 -6.192857095519846 11.313611592277427 1.0070978811952318 1.0807443799262313 0.3922376154194096 0.04500548276888065 0.9844373351182162 160.46543337445524 0.01540166670255848 0.015402604356378172 6.4142060113735e-07 6.192857095519846 0.07364649873099949 KPSKYPLCSADAAVST(ph)TPPGS(ph)PPPPPPLPEPPVLK ddPTM_KYSE-520_SHP099_60min_R1 1 KPSKYPLCSADAAVSTTPPGSPPPPPPLPEPPVLK 35 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 2 KPSKYPLCSADAAVS(0.139)T(0.684)T(0.176)PPGS(0.999)PPPPPPLPEPPVLK 154.77 1.2159e-06 3996100000.0 2055100.0 1795700.0 1818000.0 1599500.0 1765000.0 1623500.0 1467400.0 1607600.0 2116500.0 1649200.0 True False 1941099.5062597163 1709431.8765993484 1935191.1889028456 1751515.9990927896 1903895.458523726 1613367.1342932512 1615739.1124439137 1602023.6108166615 1732196.952623145 1634589.371058186 1.1875150668593326 1.0457867320480074 1.1839005093065413 1.0715327225937537 1.1647545813241151 0.987016777950051 0.9884678935590598 0.9800771002074714 1.0597138237242854 1.0 20.640496827835054 -6.268582106019205 24.931027456370593 1.0008982306218999 1.1256493785182156 0.6453902443375523 0.04721995458080972 332.4714528512391 1160457.7691370102 0.01528192516835257 0.013756760624889229 5.387879745929676e-07 6.268582106019205 0.1247511478963157 KPSKYPLCSADAAVSTT(ph)PPGS(ph)PPPPPPLPEPPVLK ddPTM_KYSE-520_SHP099_60min_R1 1 KPSKYPLCSADAAVSTTPPGSPPPPPPLPEPPVLK 35 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 2 KPS(0.001)KYPLCS(0.001)ADAAVS(0.35)T(0.066)T(0.582)PPGS(1)PPPPPPLPEPPVLK 167.63 1.3443e-09 3801500000.0 3001200.0 2795600.0 2662300.0 2576200.0 2411200.0 2374900.0 2212400.0 2629200.0 3167600.0 2617100.0 True False 2834717.453256128 2661295.1797188516 2833916.1178306076 2821041.273437224 2600947.722148671 2360077.368175573 2436050.9829432396 2620079.9188598963 2592443.6886978894 2593914.5300729894 1.0928337924751756 1.0259764340207331 1.0925248634737648 1.0875613828948494 1.0027114201312883 0.9098516318921132 0.9391408061832678 1.0100872208716032 0.9994329645953838 1.0 21.306699512648823 -5.902991611275533 4.61049650379991 0.968937300352362 1.0719863892038213 0.676084454284342 0.033620884991416126 0.1339277061476416 4.952014365664226 0.011353903074937484 0.012966337564444257 1.2502831801442024e-06 5.902991611275533 0.10304908885145925 KPSKYPLCSADAAVSTTPPGS(ph)PPPPPPLPEPPVLK ddPTM_KYSE-520_SHP099_60min_R1 2 KPSKYPLCSADAAVSTTPPGSPPPPPPLPEPPVLK 35 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 KPS(0.001)KYPLCS(0.001)ADAAVS(0.03)T(0.126)T(0.126)PPGS(0.716)PPPPPPLPEPPVLK;KPSKYPLCSADAAVS(0.002)T(0.002)T(0.038)PPGS(0.958)PPPPPPLPEPPVLK 130.82 1.9372e-05 868900000.0 615340.0 759880.0 644060.0 540940.0 521430.0 613910.0 518170.0 671500.0 792800.0 658200.0 True False 581205.863550121 723374.2241968658 685577.138132436 592350.7749604587 562463.5744691356 610078.3599716487 570551.6804518612 669170.7232292776 648847.504861625 652368.8600718508 0.8909160125854381 1.1088423566342431 1.0509041434885897 0.9079997700920583 0.8621864238081303 0.9351739442383189 0.8745844803030935 1.025755158141019 0.9946022021807756 1.0 19.315328393071336 -5.259618072862143 24.883447395502905 0.9374419137270341 1.026082991620646 0.17728553370807665 0.07155542493237627 226.1498302646181 3089725.228979407 0.020133377483971284 0.03270596865341249 5.500243635108776e-06 5.259618072862143 0.08864107789361186 KPSLVSDLPWEGAAPQS(ph)PSFSGSEDS(ph)GSPK ddPTM_KYSE-520_SHP099_60min_R1 1 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 2 KPSLVSDLPWEGAAPQS(0.605)PS(0.113)FS(0.122)GS(0.25)EDS(0.505)GS(0.406)PK 79.385 0.0079778 190660000.0 47574.0 58687.0 52432.0 63762.0 56740.0 70212.0 65984.0 79522.0 102450.0 85182.0 True False 44934.97538358223 55867.588429017094 55811.8506141662 69821.92130925563 61205.11519356151 69773.78086418104 72654.30666178207 79246.15674257434 83847.66255433092 84427.35375059328 0.5322324269018851 0.6617237891176295 0.6610636024319785 0.8270059193791205 0.724944138061788 0.8264357197585472 0.8605541146819555 0.9386312992430782 0.9931338461942699 1.0 16.365422875244718 -4.298255865838069 0.24198400789893965 1.0444665608768366 0.15472918698597338 0.9144851711441304 0.04310773193672993 2.8112735413072625 0.14476904720308373 0.06847203497422026 0.7552915525838761 5.032040573275867e-05 4.298255865838069 -0.8897373738908633 KPSLVSDLPWEGAAPQS(ph)PSFSGSEDSGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 2 KPSLVSDLPWEGAAPQS(0.987)PS(0.012)FSGSEDS(0.041)GS(0.959)PK;KPSLVSDLPWEGAAPQS(0.999)PS(0.001)FSGS(0.002)EDS(0.062)GS(0.936)PK 220.48 1.2033e-22 2159160000.0 1017430.0 1179780.0 981920.0 1111480.0 1294820.0 1391660.0 1485360.0 1740250.0 1949140.0 1576040.0 True False 960991.1297035794 1123101.597914118 1045216.1343275479 1217114.725021352 1396714.967481977 1382974.1337299333 1635514.6845166213 1734213.4789274037 1595225.3098208762 1562077.5117405667 0.6152006686484984 0.7189794293003338 0.6691192507873064 0.7791641041328128 0.8941393477495672 0.8853428356374806 1.0470125024040748 1.1101968153904425 1.0212203285887997 1.0 20.57503461245146 -5.957492362104638 0.8438010575910216 1.0610432673283914 0.6466060488683304 0.9175655592235912 0.04680792500752424 0.1582689367730388 0.24856661105065833 0.026805073815649116 0.03521970768031026 1.1028276290026434e-06 5.957492362104638 -0.414437218460061 KPSLVSDLPWEGAAPQS(ph)PSFSGSEDSGSPK ddPTM_KYSE-520_SHP099_60min_R1 4 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQS(0.925)PS(0.072)FS(0.002)GS(0.001)EDSGSPK;KPSLVSDLPWEGAAPQS(0.96)PS(0.037)FS(0.002)GS(0.001)EDSGSPK;KPSLVSDLPWEGAAPQS(0.999)PS(0.001)FSGSEDSGSPK;KPSLVSDLPWEGAAPQS(1)PSFSGSEDSGSPK 179.1 1.3102e-12 1034539000.0 640373.0 676230.0 549277.0 539074.0 567111.0 851640.0 735960.0 1045960.0 1202350.0 976630.0 True False 604850.2331380724 643742.8957580762 584684.274294274 590307.4308814913 611739.4092798004 846324.5988601827 810358.0190774295 1042331.8088888994 984033.5487769627 967977.818006642 0.6248596010016441 0.6650388921966588 0.6040265214943821 0.6098357006745383 0.6319766815933407 0.8743223068923418 0.837165897815924 1.076813734260331 1.0165868788226824 1.0 19.884614461793618 -6.6276831450411855 1.2559793947308706 1.0319882389488804 0.6195582375832743 0.9190559993785474 0.05103519045185276 0.11359270632992681 0.3647548064097185 0.029985518653782153 0.01950068571307085 2.3567681206595973e-07 6.6276831450411855 -0.41243000136560604 KPSLVSDLPWEGAAPQSPSFSGSEDSGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KPSLVSDLPWEGAAPQSPSFSGSEDSGSPK 30 1 Q13425;Q13425-2;H7BY41;H0YCS0 Q13425 SNTB2 Beta-2-syntrophin 1 KPSLVSDLPWEGAAPQSPSFSGSEDS(0.008)GS(0.992)PK;KPSLVSDLPWEGAAPQSPSFSGS(0.005)EDS(0.083)GS(0.911)PK 269.57 1.5842999999999998e-41 4576300000.0 1927920.0 1618240.0 1526530.0 1441930.0 1640300.0 1435390.0 1340550.0 1383780.0 1659610.0 1349070.0 True False 1820974.4343867602 1540497.3213722382 1624932.5663343577 1578970.5936679356 1769382.2779696702 1426431.1985791156 1476065.876507216 1378979.990156681 1358266.6593635248 1337118.289360578 1.3618648767848107 1.1521024980586556 1.2152496748147954 1.1808757730948498 1.323280290194673 1.066795069612912 1.103915703084941 1.0313074027400535 1.0158163792771544 1.0 20.350695669703143 -6.363363298293 6.267041077187169 1.0469595905810676 1.2356385856479015 0.7153851258724859 0.06391460246268635 0.1425884498485995 7.4300239049488335 0.022380543641912026 0.019676273013202343 4.331483872362793e-07 6.363363298293 0.18867899506683394 KPSPAAS(ph)PATK ddPTM_KYSE-520_SHP099_60min_R1 2 KPSPAASPATK 11 1 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KPS(0.001)PAAS(0.994)PAT(0.005)K;KPS(0.001)PAAS(0.998)PAT(0.001)K 131.66 0.00014642 1227030000.0 2086550.0 1603360.0 1470970.0 1364090.0 1333740.0 1658720.0 1380430.0 1532100.0 1717120.0 1491480.0 True False 1970804.9120656988 1526332.1789075737 1565791.0798352167 1493732.703471388 1438697.7500574684 1648367.3132090573 1519977.336098509 1526785.50269483 1405334.293072647 1478266.6475538795 1.3331863472174206 1.0325147911800818 1.059207472769656 1.010462291050874 0.9732329092576859 1.1150676475970334 1.0282159437295355 1.0328214501904889 0.9506636001008916 1.0 20.495475093481144 -4.260302812440126 5.808111732943613 1.025203600408343 1.3426909554076885 0.8251350163217605 0.04290814997383276 0.054541254296928646 8.173568100119137 0.010682847027614684 0.0685030083274663 5.491578392593658e-05 4.260302812440126 0.31748735499934555 KPSPAAS(ph)PATKK ddPTM_KYSE-520_SHP099_60min_R1 2 KPSPAASPATKK 12 2 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 KPSPAAS(0.999)PAT(0.001)KK;KPSPAAS(0.989)PAT(0.011)KK 111.33 0.00013451 1840200000.0 2339100.0 1792250.0 1667400.0 1749590.0 1426440.0 1788350.0 1669470.0 1820890.0 1820410.0 1352390.0 True False 2209345.460119756 1706147.6197779034 1774883.2719343293 1915870.507566587 1538692.7126666198 1777188.244295249 1838236.3200570669 1814573.7575889204 1489869.4328016532 1340408.8767434997 1.6482623313323042 1.2728561033726962 1.3241357191295076 1.4293179796161612 1.147927874369832 1.3258553230510508 1.371399691505349 1.3537464493650595 1.1115037050644319 1.0 20.354241715135732 -11.257311417699961 0.05369189894736744 3.5133825227524755e-12 2.0235128678180994 0.5296363797468504 0.11811797328373021 238.9519519798469 1.6680057024016477 49.047997898495396 19.23046906810265 5.529534630303468e-12 11.257311417699961 2.023512867814586 KPSPQPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 KPSPQPSSPR 10 1 G3V5E1;O75909-1;O75909;O75909-4 G3V5E1 CCNK Cyclin-K 1 KPS(0.003)PQPS(0.499)S(0.499)PR 53.448 0.044029 2053800000.0 1995500.0 1709100.0 1857300.0 1439100.0 1635700.0 1537700.0 1577800.0 1508600.0 1775400.0 1606000.0 True False 1884805.6370693715 1626992.2705885975 1977024.5297850708 1575871.6313188088 1764420.2841400884 1528102.6439191462 1737299.4218440794 1503367.0187098884 1453032.1141918886 1591772.0894490925 1.1840926534411702 1.0221263969716259 1.2420273875195995 0.9900108449974224 1.1084628860094845 0.9600009034258277 1.0914247293061619 0.9444612257463311 0.9128392964188602 1.0 20.602202354351665 -6.10709624132406 0.6257165960025911 0.9557372201255804 1.1432147911190622 0.415962479752068 0.07820427564936537 0.821269079805609 0.7089755060208086 0.05692795271598877 0.0730607483125493 7.81454612057633e-07 6.10709624132406 0.18747757099348183 KPSPQPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 10 KPSPQPSSPR 10 1 G3V5E1;O75909-1;O75909;O75909-4 G3V5E1 CCNK Cyclin-K 1 KPSPQPSS(1)PR;KPSPQPS(0.365)S(0.635)PR;KPSPQPSS(1)PR;KPSPQPS(0.026)S(0.974)PR;KPSPQPSS(1)PR;KPSPQPS(0.042)S(0.958)PR;KPSPQPS(0.047)S(0.953)PR;KPSPQPS(0.253)S(0.747)PR;KPSPQPS(0.031)S(0.969)PR;KPSPQPS(0.133)S(0.867)PR 149.86 0.00016808 82151390000.0 31337680.0 26509800.0 27178490.0 23899840.0 24836030.0 25018130.0 25075900.0 23635780.0 26629980.0 25435730.0 True False 29599316.42028366 25236229.415978953 28930458.952521514 26171273.607851073 26790484.26331952 24861982.57066589 27610816.68920015 23553792.995812524 21794646.919166226 25210389.22089849 1.1740920047258496 1.00102498199667 1.1475609796829007 1.0381146192759312 1.0626763446044374 0.9861800368419625 1.0952158035827466 0.9342891452182457 0.8645105289012857 1.0 24.587515056217008 -7.283451548997198 10.80681760808913 0.9244380130940087 1.0673126641968573 0.5027343597703864 0.06314152938064553 0.5708569702196076 275.6462871563438 0.032085226105639096 0.015710829778490133 5.2065309095161974e-08 7.283451548997198 0.14287465110284858 KPSPS(ph)ESPEPWKPFPAVSPEPR ddPTM_KYSE-520_SHP099_60min_R1 1 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.474)PS(0.503)ES(0.023)PEPWKPFPAVSPEPR 154.88 1.7533000000000002e-07 1919500000.0 551430.0 531830.0 521670.0 460510.0 499420.0 558140.0 429390.0 465480.0 513670.0 447770.0 True False 520841.07865154784 506280.08850689477 555297.6829015119 504276.7319426205 538721.5126889058 554656.4412284798 472796.93164255866 463865.3585238493 420400.47656694136 443803.1061597886 1.1735859245293838 1.1407763521254213 1.2512253186023903 1.136262286008108 1.2138750387541055 1.249780439861949 1.0653303798020985 1.0452052995700245 0.9472679905389818 1.0 18.759560239370657 -7.0122635156157385 2.7087494500439058 0.9962904679681642 1.1922909662089092 0.8012862637497624 0.044400479862126634 0.1207081658067729 1.7710171498889034 0.02308307248424905 0.012927000972373556 9.721571717673539e-08 7.0122635156157385 0.19600049824074495 KPSPSES(ph)PEPWKPFPAVS(ph)PEPR ddPTM_KYSE-520_SHP099_60min_R1 3 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 KPS(0.008)PS(0.036)ES(0.956)PEPWKPFPAVS(1)PEPR;KPS(0.274)PS(0.329)ES(0.397)PEPWKPFPAVS(1)PEPR;KPS(0.063)PS(0.071)ES(0.866)PEPWKPFPAVS(1)PEPR 110.91 0.00011402 1520700000.0 838940.0 810230.0 730850.0 774136.0 780380.0 816960.0 706726.0 696170.0 845210.0 791840.0 True False 792402.3258145718 771305.3346199755 777961.7604013453 847709.6526875257 841791.4662451813 811861.0496040748 778168.7610610859 693755.1487572987 691741.1700102104 784824.9136421976 1.0096549077898267 0.982773764202412 0.9912551791851231 1.0801258190868255 1.0725850461838866 1.0344486209496186 0.9915189331207364 0.8839616794754076 0.8813955290995971 1.0 19.58201131392663 -7.080275547880214 4.021384191904368 0.9129406860806916 1.0283514374793998 0.5543435784685962 0.04244395057195348 0.17123596753499407 5.132445813510938 0.022241684071452848 0.012565005180353112 8.312362072922088e-08 7.080275547880214 0.11541075139870827 KPSPSES(ph)PEPWKPFPAVSPEPR ddPTM_KYSE-520_SHP099_60min_R1 1 KPSPSESPEPWKPFPAVSPEPR 22 2 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KPS(0.005)PS(0.208)ES(0.787)PEPWKPFPAVSPEPR 150.48 3.7935e-07 1005800000.0 705980.0 674550.0 673750.0 626300.0 682640.0 727940.0 626970.0 729170.0 870500.0 718890.0 True False 666817.8820637609 642143.6054798078 717181.003038115 685823.3636960385 736359.884309709 723396.6564443678 690350.2462375362 726640.6794595566 712439.1435192293 712521.1938879576 0.9358569089365453 0.9012273753933886 1.0065398884834997 0.9625304756954117 1.0334568159182362 1.0152633530759512 0.9688838060669565 1.0198162324050382 0.9998848450131278 1.0 19.442573402092506 -4.766317600228599 24.99678317133479 1.0006813265967183 0.9185421317110851 0.6948232926685936 0.021805068013758738 56.918458964202536 291665.61593148304 0.005597992356003454 0.012274407174520285 1.7127043460717095e-05 4.766317600228599 -0.08213919488563315 KPSQT(ph)ASYER ddPTM_KYSE-520_SHP099_60min_R1 2 KPSQTASYER 10 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 KPS(0.249)QT(0.472)AS(0.279)YER;KPS(0.064)QT(0.893)AS(0.043)YER 92.99 0.00379 8184580000.0 8870300.0 8206900.0 8244500.0 7222300.0 8741000.0 6554400.0 7124600.0 6407900.0 6908300.0 6887300.0 True False 8378246.77649534 7812628.205191947 8775953.661666399 7908705.220536332 9428866.97051324 6513491.558368776 7844824.09739532 6385672.490515098 5653926.864071103 6826283.880238317 1.2273510629626556 1.1444921339719019 1.2856121743006117 1.1585667047090673 1.381259135414694 0.9541782428980055 1.149208593581292 0.9354536967033026 0.8282583852744364 1.0 22.70266898143104 -6.82653582345586 1.222886222504973 0.9127182098020997 1.2258497407983697 0.5916018782851287 0.10488700678888856 0.32020194931185947 0.9472314413698555 0.06894296886870692 0.03720235583494709 1.4909537667397878e-07 6.82653582345586 0.31313153099627 KPSQTAS(ph)YER ddPTM_KYSE-520_SHP099_60min_R1 9 KPSQTASYER 10 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 KPS(0.001)QT(0.017)AS(0.982)YER;KPS(0.001)QT(0.048)AS(0.95)YER;KPSQT(0.083)AS(0.917)YER;KPS(0.001)QT(0.003)AS(0.996)YER;KPSQT(0.026)AS(0.974)YER;KPS(0.003)QT(0.116)AS(0.882)YER;KPSQT(0.002)AS(0.998)YER;KPS(0.001)QT(0.003)AS(0.996)YER;KPSQT(0.001)AS(0.999)YER 138.01 0.00021907 32808570000.0 28594570.0 28354730.0 27250880.0 23646830.0 26340970.0 22262360.0 21828810.0 22133100.0 23731910.0 23504740.0 True False 27008372.200237915 26992526.20948254 29007515.327749655 25894217.613521315 28413854.479382277 22123412.353436872 24035479.143455613 22056325.44200437 19422793.37676672 23296506.29001098 1.1593314406898214 1.1586512532592206 1.2451444421169464 1.1115064761716729 1.2196616147360044 0.9496450702963515 1.031720329402417 0.9467653719159438 0.8337212942995996 1.0 24.47361027849021 -6.267377179118797 24.84389455146612 0.9540026059068539 1.1776771052365338 0.7899904479676392 0.05838356681484758 205.08662066103275 858084.2357611504 0.020382606257877 0.018458166490357357 5.402848887153518e-07 6.267377179118797 0.22367449932967987 KPSTDEQTS(ph)S(ph)AEEDVPTCGYLNVLSNSR ddPTM_KYSE-520_SHP099_60min_R1 3 KPSTDEQTSSAEEDVPTCGYLNVLSNSR 28 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 2 KPS(0.004)T(0.004)DEQT(0.271)S(0.797)S(0.924)AEEDVPTCGYLNVLSNSR;KPS(0.005)T(0.005)DEQT(0.159)S(0.861)S(0.97)AEEDVPTCGYLNVLSNSR;KPS(0.009)T(0.009)DEQT(0.633)S(0.667)S(0.683)AEEDVPTCGYLNVLSNSR 110.09 0.00031660000000000005 1026070000.0 916450.0 840920.0 673800.0 740040.0 691010.0 760330.0 767220.0 756040.0 806610.0 699050.0 True False 865612.6916022184 800520.9409533463 717234.2261181175 810373.1790988606 745388.5556909235 755584.4984399076 844778.0849456297 753417.4737010626 660149.9569833953 692856.960852671 1.2493382335900096 1.1553913523047783 1.035183691068711 1.1696110811985885 1.075818816590374 1.0905346141143482 1.2192676593823861 1.0874069487212228 0.9527940026336396 1.0 19.402198015589246 -1.0000000010990655 0.07416507372020846 0.8699986126320703 1.6901625817310832 0.38271706700599284 0.07071905132322438 279.1474219143651 1.5242234351381907 2.769733263555824 23.688382389558424 0.09999999974693081 1.0000000010990655 0.8201639690990129 KPSVGVPPPAS(ph)PSYPR ddPTM_KYSE-520_SHP099_60min_R1 1 KPSVGVPPPASPSYPR 16 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 KPSVGVPPPAS(0.823)PS(0.173)Y(0.004)PR 54.833999999999996 0.040371 811100000.0 260560.0 271460.0 204850.0 171600.0 200840.0 202490.0 240920.0 239830.0 292980.0 189370.0 True False 246106.2173865175 258418.65413023275 218054.95877158866 187908.8124065785 216644.96537671678 201226.18480014816 265274.5447526149 238998.08570674295 239782.21742477207 187692.32912763048 1.3112215002626222 1.3768205409956231 1.1617680902841354 1.0011533943872624 1.1542558312513589 1.0721065998563781 1.4133478229268956 1.2733503112118376 1.277528061691432 1.0 17.518010163733628 -4.764988727332009 24.943260164997888 1.1776694258343274 1.344021044992396 0.24186869591003501 0.12308184817505154 127.29617462419827 894608.7562224483 0.03416287100270189 0.07594425806025899 1.7179529782427254e-05 4.764988727332009 0.1663516191580685 KPSVS(ph)EEVQATPNK ddPTM_KYSE-520_SHP099_60min_R1 2 KPSVSEEVQATPNK 14 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 KPS(0.143)VS(0.857)EEVQATPNK;KPS(0.428)VS(0.572)EEVQATPNK 132.13 1.3865e-05 9139100000.0 357430.0 339530.0 375870.0 319450.0 353890.0 408720.0 356040.0 449620.0 575160.0 436060.0 True False 337602.64538096 323218.4691550801 400099.18161326397 349810.43195385556 381739.1296413379 406169.0268730139 392031.99781554483 448060.3731620968 470725.44260369916 432196.8476495465 0.7811316700178951 0.747850131052244 0.925733687760931 0.8093775645432397 0.8832529244888824 0.9397778560438791 0.9070681564374343 1.0367043989303075 1.0891459416321199 1.0 18.721329023966597 -6.4722320229340635 0.6260289055327417 1.0553497305355526 0.7907355618021613 0.7480921688574862 0.05290029267292773 0.39945112908510666 0.3318868445162312 0.04526404269497033 0.04060378675902897 3.3710716018107923e-07 6.4722320229340635 -0.2646141687333913 KPT(ph)YDPVSEDQDPLSSDFKR ddPTM_KYSE-520_SHP099_60min_R1 1 KPTYDPVSEDQDPLSSDFKR 20 2 A0A5F9ZHD0;A0A5F9ZHP4;C9J1X3;A0A5F9ZI29;A0A5F9ZHJ2;Q07912;A0A5F9ZHK8;A0A5F9ZHC7;A0A5F9ZHX6;A0A5F9ZGY5 A0A5F9ZHD0 TNK2 Activated CDC42 kinase 1 1 KPT(0.547)Y(0.449)DPVS(0.004)EDQDPLSSDFKR 78.078 0.004887600000000001 225850000.0 324100.0 307630.0 308180.0 295000.0 286030.0 304960.0 257180.0 264380.0 383990.0 277020.0 True False 306121.52692266763 292850.99303795636 328045.7759054341 323036.7113050156 308538.9337119209 303056.6315208315 283178.26423492277 263462.92748675594 314267.09560017096 274565.81831829844 1.1149294868445252 1.0665966901184338 1.1947801001402785 1.1765365160295587 1.1237339578601082 1.1037667885137263 1.0313675095078298 0.9595620062994471 1.1445965762418673 1.0 18.066792504830147 -6.627079676865742 2.9934447832220705 1.0299899128173768 1.1361102257302238 0.43684466798226507 0.05435958841312796 0.24840534406409076 4.473797710687581 0.023062856243187713 0.017126771858648384 2.3600452130439236e-07 6.627079676865742 0.10612031291284696 KPTAEAS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 4 KPTAEASPVK 10 1 H3BMJ2;Q6ZRI6-2;Q6ZRI6 H3BMJ2 C15orf39 Uncharacterized protein C15orf39 1 KPT(0.002)AEAS(0.998)PVK;KPTAEAS(1)PVK;KPTAEAS(1)PVK;KPT(0.001)AEAS(0.999)PVK 127.91 0.00025841 5804940000.0 7388070.0 6199510.0 6249830.0 5282040.0 5661140.0 6234250.0 5815340.0 5524730.0 6823250.0 6578570.0 True False 6978239.0293475855 5901676.233945776 6652704.041881563 5784043.493496761 6106639.510519537 6195339.733272378 6403211.319449086 5505566.001111674 5584319.800135071 6520288.98785002 1.0702346233964346 0.905124948440633 1.0203081572424608 0.8870839167213007 0.9365596405157376 0.9501633661969346 0.9820440982571328 0.8443745379032752 0.8564528060858891 1.0 22.63650447735395 -1.3282443441180332 1.1839275787740395 0.9261059237147118 199.99999496587466 0.32923657830935693 0.0571895460414169 2566.291684705258 3.2387692831819392 0.016141212729371055 1387998.6764700918 0.046962980967132084 1.3282443441180332 199.07388904215995 KPTKPES(ph)QSPGKR ddPTM_KYSE-520_SHP099_60min_R1 1 KPTKPESQSPGKR 13 3 A0A075B6Q3;Q5H9F3-3;H7C4B2;Q5H9F3-2;Q5H9F3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 KPT(0.003)KPES(0.575)QS(0.422)PGKR 75.46300000000001 0.020771 2066900000.0 3637700.0 2340900.0 1145500.0 3703900.0 1338000.0 2550900.0 2028300.0 3684300.0 1453900.0 1132100.0 True False 3435909.52942483 2228439.6502374667 1219340.7628648027 4055917.5423818603 1443292.9878213857 2534978.8868916873 2233340.3583003846 3671520.0232220828 1189908.4098364245 1122070.4747604732 3.062115621711095 1.986006851051997 1.0866882163752625 3.614672726548367 1.2862765933926597 2.2591975672765345 1.9903744092162594 3.2720939600570427 1.060457820254501 1.0 20.097731860595683 KPTSAKPSSTT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 KPTSAKPSSTTPR 13 2 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-4;B5MEG9;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KPTSAKPS(0.007)S(0.033)T(0.161)T(0.799)PR;KPTSAKPS(0.003)S(0.02)T(0.16)T(0.817)PR 107.5 0.00099831 11375300000.0 13968400.0 11733400.0 11639300.0 14963800.0 11824500.0 11804600.0 11256300.0 14313700.0 13773100.0 11689500.0 True False 13193545.006684948 11169709.851807542 12389587.901538465 16385955.052969495 12755020.87779816 11730923.112705959 12394196.654901464 14264049.115542687 11272252.231596446 11585940.12429338 1.1387548067006443 0.9640745362033171 1.0693640540710199 1.4142965419449607 1.1009051264690601 1.0125137008181648 1.06976184253821 1.2311516340080038 0.972925123957857 1.0 23.465871778558974 -7.7927426503376 24.994198631319595 0.9864622150771974 1.121112778668865 0.17853014860654814 0.11871016443418303 434.6691822758551 347052.14204155706 0.11986515490103931 0.030961032486793886 1.611600337486869e-08 7.7927426503376 0.1346505635916676 KPVKENQSEGKGS(ph)DS(ph)DSEGDNPEK ddPTM_KYSE-520_SHP099_60min_R1 1 KPVKENQSEGKGSDSDSEGDNPEK 24 3 I3L4J1;Q9UN37 I3L4J1 VPS4A Vacuolar protein sorting-associated protein 4A 2 KPVKENQS(0.113)EGKGS(0.885)DS(0.663)DS(0.338)EGDNPEK 61.498999999999995 0.064052 868380000.0 364460.0 374770.0 326570.0 330930.0 335450.0 310100.0 266240.0 272190.0 460570.0 280740.0 True False 344242.6772670022 356765.48665876157 347621.22473047435 362381.48770226707 361848.00655058573 308164.5508742455 293154.1374520019 271245.8364196235 376942.0980248728 278252.8620124151 1.2371577232928614 1.2821628646638805 1.2492997276519089 1.3023459492254867 1.3004286961635665 1.1074982253389936 1.0535529997133397 0.9748177771034789 1.3546746484428052 1.0 18.086037001141094 -6.288894063794036 7.584143762490573 1.093295963222163 1.2749173463614918 0.4457125168266147 0.09816487826616385 0.21323364293642663 49.42752055976747 0.03321196969601063 0.0297601633251203 5.141690560685195e-07 6.288894063794036 0.18162138313932874 KPVLSLFDYEQLMAQEHS(ph)PPKPSSAGEMSPQR ddPTM_KYSE-520_SHP099_60min_R1 1 KPVLSLFDYEQLMAQEHSPPKPSSAGEMSPQR 32 2 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 KPVLSLFDYEQLMAQEHS(0.996)PPKPS(0.002)S(0.002)AGEMSPQR 149.03 6.3206e-07 449700000.0 254880.0 197710.0 174030.0 206360.0 184700.0 164150.0 164760.0 143530.0 159180.0 96881.0 True False 240741.29830931648 188211.71483123983 185248.25225784534 225972.39235560386 199234.83920075453 163125.47896164912 181415.5487026435 143032.12793015386 130276.92460125321 96022.70971227741 2.5071287722526687 1.960075021785968 1.9292129207030657 2.3533223862637063 2.074872077633948 1.6988218667275536 1.8892983675032426 1.4895656283678678 1.3567303504724577 1.0 16.551088028244408 -7.368958783044324 0.5498433284617432 0.9818815688920925 2.2089139049376545 0.825555942383029 0.1805371466898683 0.33111863022761584 0.22620249602920706 0.18379447866944282 0.10790729227897121 4.276034661670845e-08 7.368958783044324 1.227032336045562 up KPVNYSQFDHS(ph)DS(ph)DDDFVSATVPLNK ddPTM_KYSE-520_SHP099_60min_R1 1 KPVNYSQFDHSDSDDDFVSATVPLNK 26 1 Q96B01-2;Q96B01;Q96B01-3;H0YGT5;F5H1Y0;H0YFK6;F5H4V6;F5H031;F5H710 Q96B01-2 RAD51AP1 RAD51-associated protein 1 2 KPVNY(0.009)S(0.044)QFDHS(0.95)DS(0.99)DDDFVS(0.006)AT(0.001)VPLNK 60.255 0.025041 106740000.0 67285.0 51569.0 42671.0 61819.0 55784.0 55897.0 55505.0 57701.0 66477.0 58192.0 True False 63552.56692067789 49091.54783335292 45421.64093601397 67694.25917343993 60173.88343245747 55548.126089060665 61115.98707659761 57500.84869851462 54406.45254879705 57676.464152690955 1.1018804265190514 0.8511539074827718 0.7875247139936677 1.1736894791994905 1.0433004920890248 0.9630986730047149 1.059634774330149 0.996955162616914 0.9433042289964765 1.0 15.815695102627881 -5.252769857515387 24.999601072991723 1.0251223988755345 0.907283120901459 0.2244550692537267 0.09535203396250591 958.1049259842047 2762803.9107996584 0.026224572624645035 0.044510066055446315 5.58766219172892e-06 5.252769857515387 -0.11783927797407545 KPVTVS(ph)PTTPTSPTEGEAS ddPTM_KYSE-520_SHP099_60min_R1 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVT(0.028)VS(0.861)PT(0.105)T(0.005)PT(0.001)SPTEGEAS 136.34 3.8563e-06 750510000.0 213730.0 251400.0 179460.0 147190.0 162340.0 265530.0 167680.0 203710.0 239960.0 252230.0 True False 201873.97083980808 239322.36664090658 191028.27874615247 161178.89334571298 175115.23441175147 263872.72877664765 184630.73079909707 203003.37755627139 196389.31289933858 249995.4384319709 0.8075106174176947 0.9573069338464402 0.7641270574548318 0.6447273372532883 0.7004737186810873 1.0555101742324513 0.7385363987324874 0.812028326714901 0.7855715853502675 1.0 17.93154224527772 KPVTVSPT(ph)TPTSPTEGEAS ddPTM_KYSE-520_SHP099_60min_R1 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVTVS(0.073)PT(0.802)T(0.122)PT(0.003)SPTEGEAS 241.64 4.5531e-26 1934700000.0 458850.0 649250.0 432600.0 367150.0 362770.0 589330.0 389980.0 527740.0 545810.0 578460.0 True False 433396.6758052026 618059.0554558814 460486.088184473 402043.825612327 391317.93512104877 585651.7728691356 429402.9842380243 525909.3931154417 446704.66275040887 573335.2944350706 0.7559218488934039 1.0780062930974428 0.8031706623577182 0.7012368321201581 0.6825289475796696 1.021482156346577 0.7489561316142792 0.9172806876186482 0.7791333746347575 1.0 19.12901956829826 -10.512828911748576 3.3528608355168785 1.0038195125366918 0.8357591915549807 0.1367638494518416 0.12632318590760022 77372815.95458134 79357652.0637439 2605594.5096838465 0.03145009998136726 3.0702312532245143e-11 10.512828911748576 -0.1680603209817111 KPVTVSPTT(ph)PT(ph)SPTEGEAS ddPTM_KYSE-520_SHP099_60min_R1 3 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 2 KPVTVS(0.001)PT(0.125)T(0.875)PT(0.989)S(0.01)PTEGEAS;KPVTVSPT(0.136)T(0.864)PT(0.694)S(0.306)PTEGEAS;KPVTVS(0.007)PT(0.156)T(0.837)PT(0.679)S(0.312)PT(0.008)EGEAS 183.31 1.5062e-12 3534300000.0 2255790.0 2055010.0 1969190.0 2108480.0 2090450.0 2383220.0 2482500.0 2650690.0 2997030.0 2507190.0 True False 2130656.83189412 1956284.234967102 2096127.1382154 2308869.30526237 2254956.5219665286 2368345.439969427 2733455.3268652097 2641495.3750657 2452844.900978101 2484978.247164306 0.8574146813258771 0.7872440079503653 0.8435193107253001 0.9291305901357889 0.9074351151925522 0.9530648578803566 1.0999916518321435 1.0629853110706304 0.9870689627875521 1.0 21.24480179220005 -5.9567413564529605 0.9919772182904556 1.0409885558941379 0.823201759127546 0.7837564226262228 0.04344221803235412 0.2401910422376429 0.5107725267593013 0.022868245021662736 0.028560089419983756 1.1047363484078192e-06 5.9567413564529605 -0.21778679676659185 KPVTVSPTTPT(ph)SPTEGEAS ddPTM_KYSE-520_SHP099_60min_R1 1 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVTVSPT(0.209)T(0.312)PT(0.469)S(0.008)PT(0.001)EGEAS(0.001) 166.3 1.1745e-08 2383100000.0 674870.0 831800.0 633670.0 491000.0 565950.0 904620.0 721460.0 871780.0 915900.0 849700.0 True False 637433.6157800091 791839.0794427466 674517.3821078474 537664.4923754669 610487.0451849869 898973.9310282487 794392.2175710669 868755.9986549811 749595.6479600953 842172.3190565968 0.7568921482649341 0.9402340370552268 0.8009256144436606 0.6384257475688108 0.724895643529172 1.0674465435236355 0.9432656471788894 1.031565605989239 0.8900739563606103 1.0 19.68375593149681 -6.256295430924365 24.97877252966655 0.9857429084881226 0.7757613828671441 0.6228177823164902 0.08332124042883468 319.2366356096626 1550199.923568071 0.029866178112629687 0.02900921328123071 5.542485544274247e-07 6.256295430924365 -0.2099815256209785 KPVTVSPTTPTS(ph)PTEGEAS ddPTM_KYSE-520_SHP099_60min_R1 10 KPVTVSPTTPTSPTEGEAS 19 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 KPVTVSPTTPT(0.003)S(0.997)PT(0.001)EGEAS;KPVTVSPTTPT(0.017)S(0.62)PT(0.181)EGEAS(0.181);KPVTVSPTTPT(0.001)S(0.989)PT(0.009)EGEAS;KPVTVSPT(0.002)T(0.008)PT(0.046)S(0.863)PT(0.04)EGEAS(0.04);KPVTVSPT(0.007)T(0.053)PT(0.08)S(0.86)PTEGEAS;KPVTVSPT(0.044)T(0.239)PT(0.031)S(0.686)PTEGEAS;KPVTVSPT(0.003)T(0.175)PT(0.131)S(0.565)PT(0.073)EGEAS(0.053);KPVTVSPTTPT(0.013)S(0.986)PTEGEAS;KPVTVSPTTPT(0.119)S(0.875)PT(0.006)EGEAS;KPVTVSPTTPT(0.001)S(0.999)PTEGEAS 235.26 5.8002e-26 22598230000.0 9314160.0 11228620.0 8458830.0 6849920.0 6777420.0 12413880.0 8716350.0 11894310.0 12897600.0 12310660.0 True False 8797484.977482364 10689180.24069777 9004099.716406528 7500934.337296461 7310764.395755168 12336400.37022503 9597483.721378287 11853051.414762827 10555720.96203748 12201597.129948555 0.7210109368296653 0.8760476294092197 0.7379443543752285 0.6147502050273058 0.5991645452553958 1.0110479996053636 0.7865760210867373 0.971434418668829 0.8651097761725547 1.0 23.540566666151125 -6.265148552943081 24.999970287328285 0.9162821928125574 0.7153052888600523 0.569605479339506 0.09405132017535596 280.944257407613 1893568.3442704107 0.03415272103027201 0.03126732368984843 5.430645413470094e-07 6.265148552943081 -0.20097690395250511 KPVVPSVPMAS(ph)PAPGR ddPTM_KYSE-520_SHP099_60min_R1 1 KPVVPSVPMASPAPGR 16 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 KPVVPSVPMAS(1)PAPGR 113.54 0.00013191 427200000.0 219900.0 227230.0 214660.0 201170.0 175060.0 190410.0 198890.0 216280.0 223760.0 217680.0 True False 207701.70864021787 216313.5297208164 228497.32706814384 220289.13631603404 188836.22604485168 189221.58056099698 218995.7421793442 215529.7751601313 183130.82453057182 215751.52455247752 0.9626894135327341 1.0026048722923493 1.0590763033638084 1.0210316556185115 0.8752486288870732 0.8770347322156343 1.0150368236497795 0.9989722001139683 0.8488043127872715 1.0 17.719011228309306 -5.730804044808657 24.988019186750797 0.9368166740669956 1.0141349074444113 0.286792440396459 0.05825066328577151 276.17735528410685 225265.58841456444 0.017876261530750538 0.0230753184531461 1.8586428921073945e-06 5.730804044808657 0.07731823337741561 KPYCNAHYPK ddPTM_KYSE-520_SHP099_60min_R1 2 KPYCNAHYPK 10 1 Q14847;Q14847-2;C9J9W2;F6S2S5;O76041-2 Q14847 LASP1 LIM and SH3 domain protein 1 0 ; 110.14 0.0013724 3701800000.0 6478100.0 5227400.0 3627600.0 4293100.0 4387500.0 5193300.0 3682500.0 5398300.0 4293700.0 3168100.0 False True 6118746.87922781 4976267.857512632 3861440.9003652167 4701114.933232422 4732771.288539855 5160886.688343176 4054763.037736614 5379574.557272686 3514072.3153687734 3140033.0987445028 1.948624962480269 1.5847819755474304 1.2297452857771336 1.4971545793934768 1.50723611494165 1.6435771617842763 1.291312196472659 1.713222245785763 1.1191195139865961 1.0 21.58234833581142 -11.878870876815503 0.10960031048348444 6.80968297970339e-16 1.8519953055198233 0.43681630365029234 0.20751226125294206 99.56044683808948 1.2034066602716424 27.25405907735849 3.1348689776692327 1.3216885364042968e-12 11.878870876815503 1.8519953055198226 KPYIWEYSR ddPTM_KYSE-520_SHP099_60min_R1 2 KPYIWEYSR 9 1 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 0 ; 108.7 0.0026685 1342760000.0 1092780.0 949620.0 627580.0 630500.0 1007200.0 928730.0 861450.0 649150.0 652460.0 635140.0 False True 1032161.3149970782 903998.82979132 668034.810963504 690422.5304332626 1086460.9098159182 922933.4515750981 948533.7729418068 646898.2501627489 533989.7111781234 629513.1537314423 1.63961834455553 1.4360284998539945 1.0611927757247397 1.0967563208819064 1.7258748341887946 1.466106698651816 1.5067735555950947 1.027616732594476 0.8482582262386366 1.0 19.263876997932904 -7.370841653710662 4.615239249933034 0.9299884806071341 1.4063527415338366 0.5286083848906359 0.19999193293523673 0.2033170560083458 6.883819782868062 0.1272328504318362 0.057908255764574756 4.2575361707833414e-08 7.370841653710662 0.4763642609267025 KQAEEIGEK ddPTM_KYSE-520_SHP099_60min_R1 2 KQAEEIGEK 9 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 110.08 0.0023175 976890000.0 1435940.0 1414010.0 1076920.0 923780.0 1303670.0 1470610.0 1056500.0 1252500.0 1276760.0 1300880.0 False True 1356285.5457245775 1346078.8371277198 1146339.9863329234 1011575.7734554156 1406261.4121323656 1461431.3774949168 1163301.3304463632 1248155.3698356983 1044932.5685004148 1289355.215269326 1.0519099233963007 1.043993789443466 0.8890800399744543 0.7845594150283197 1.0906702788173233 1.1334590810877876 0.9022349440013455 0.9680461637369484 0.8104303268220348 1.0 20.29821834792604 KQALYLMFDTSQES(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 KQALYLMFDTSQESPVK 17 1 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3;H0Y911;Q4VXL4;O95359-2 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KQALYLMFDTSQES(1)PVK;KQALYLMFDTSQES(1)PVK 189.07 1.8766e-12 575740000.0 483140.0 477140.0 418530.0 370070.0 445370.0 441380.0 313500.0 340220.0 432500.0 326200.0 True False 456339.2610842875 454217.47819825856 445509.113471677 405241.34153439745 480418.0851913382 438625.18369840167 345191.63946515333 339039.8562279448 353968.90243775584 323310.1217797597 1.4114598657543664 1.4048971795187826 1.3779621591159457 1.2534137171568345 1.485935802277793 1.3566701261434528 1.0676796555732313 1.0486521558978603 1.0948277786331757 1.0 18.302559148658872 -6.753066229719409 5.177193293741975 1.0540771767930448 1.3834924865839378 0.8864551945187344 0.05776280904867909 0.056144855367448065 4.287219018285528 0.023562507628579213 0.01697943740235552 1.765768521221946e-07 6.753066229719409 0.32941530979089295 KQDAET(ph)PPPPDPPAPETLLAPPPLPS(ph)TPDPPRR ddPTM_KYSE-520_SHP099_60min_R1 4 KQDAETPPPPDPPAPETLLAPPPLPSTPDPPRR 33 2 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 2 KQDAET(1)PPPPDPPAPETLLAPPPLPS(0.5)T(0.5)PDPPRR;KQDAET(1)PPPPDPPAPETLLAPPPLPS(0.534)T(0.466)PDPPRR;KQDAET(1)PPPPDPPAPETLLAPPPLPS(0.528)T(0.472)PDPPRR;KQDAET(1)PPPPDPPAPETLLAPPPLPS(0.535)T(0.465)PDPPRR 134.42 9.4006e-06 9622720000.0 3182630.0 2800220.0 2767890.0 2612750.0 2686900.0 2814860.0 2423690.0 2699280.0 3236510.0 2441290.0 True False 3006083.1694843844 2665693.22798409 2946312.618180581 2861064.974448068 2898343.743630249 2797291.4146207026 2668700.2381349215 2689916.827696688 2648841.369777624 2419662.0698948815 1.2423566112333113 1.1016799664508097 1.2176545869103859 1.1824233681409746 1.1978299696023929 1.1560669770478431 1.1029227061656834 1.1116911163605367 1.0947154161459822 1.0 21.20637414404327 -7.74156241066155 0.5050793806202999 0.9987472744935665 1.1921114547210636 0.7180050198721154 0.036482769320828605 0.4831214784767773 0.3147814497738472 0.03931124380627292 0.021382588589827608 1.813166094556721e-08 7.74156241066155 0.19336418022749713 KQDAET(ph)PPPPDPPAPETLLAPPPLPSTPDPPRR ddPTM_KYSE-520_SHP099_60min_R1 3 KQDAETPPPPDPPAPETLLAPPPLPSTPDPPRR 33 2 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KQDAET(1)PPPPDPPAPETLLAPPPLPSTPDPPRR;KQDAET(1)PPPPDPPAPETLLAPPPLPSTPDPPRR;KQDAET(1)PPPPDPPAPETLLAPPPLPSTPDPPRR 129.0 4.8527e-05 17922200000.0 3203170.0 3344010.0 2435290.0 2456250.0 2461490.0 3663620.0 2523570.0 3546290.0 3812290.0 3280740.0 True False 3025483.7747389153 3183358.74013866 2592272.6900017676 2689691.2615015064 2655195.2590377093 3640753.9886291632 2778677.083269783 3533988.747700309 3120074.2360102525 3251675.1959770946 0.9304384947432577 0.9789903813508329 0.7972114475667416 0.8271709501702805 0.8165622637595115 1.1196548760876943 0.8545370972806585 1.0868209568017393 0.9595282578869944 1.0 21.632751725705198 -6.241856287364164 24.860664148608976 1.0001863652163223 0.8696940765552424 0.38986650292651026 0.08376492332901628 846.1298066017464 1074159.1228134613 0.027555038155550233 0.027514131233323035 5.729856066131867e-07 6.241856287364164 -0.13049228866107987 KQDAETPPPPDPPAPETLLAPPPLPS(ph)TPDPPR ddPTM_KYSE-520_SHP099_60min_R1 1 KQDAETPPPPDPPAPETLLAPPPLPSTPDPPR 32 1 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KQDAETPPPPDPPAPETLLAPPPLPS(0.5)T(0.5)PDPPR 95.87799999999999 0.0011901 372660000.0 359830.0 447900.0 286490.0 336370.0 300250.0 427670.0 344420.0 428650.0 433230.0 421980.0 True False 339869.5125966788 426382.2116883937 304957.60380020714 368338.5036666716 323877.9668111889 425000.752893868 379237.3348152739 427163.11319766165 354566.35283955873 418241.5854954718 0.8126153026941375 1.0194639329881032 0.7291422335226129 0.8806835963724595 0.7743801143721886 1.0161609166395755 0.9067422943273531 1.021331039312174 0.8477548984506649 1.0 18.673976989748688 -6.2662263561515745 24.99867294636632 0.9565025474305676 0.8487858502851817 0.30463618621090993 0.08675460586228696 548.7904206854963 2865899.530390508 0.028705058799150966 0.026126320525403996 5.417184708123132e-07 6.2662263561515745 -0.1077166971453859 KQDAETPPPPDPPAPETLLAPPPLPS(ph)TPDPPRR ddPTM_KYSE-520_SHP099_60min_R1 7 KQDAETPPPPDPPAPETLLAPPPLPSTPDPPRR 33 2 Q86WR7;Q86WR7-2 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KQDAETPPPPDPPAPETLLAPPPLPS(0.5)T(0.5)PDPPRR;KQDAETPPPPDPPAPET(0.001)LLAPPPLPS(0.499)T(0.499)PDPPRR;KQDAETPPPPDPPAPETLLAPPPLPS(0.5)T(0.5)PDPPRR;KQDAETPPPPDPPAPETLLAPPPLPS(0.5)T(0.5)PDPPRR;KQDAETPPPPDPPAPETLLAPPPLPS(0.5)T(0.5)PDPPRR;KQDAETPPPPDPPAPETLLAPPPLPS(0.5)T(0.5)PDPPRR;KQDAETPPPPDPPAPETLLAPPPLPS(0.5)T(0.5)PDPPRR 133.53 5.386599999999999e-06 33377040000.0 14211040.0 15806110.0 12411290.0 11271110.0 10676970.0 14401530.0 10202440.0 13996810.0 16935930.0 14463240.0 True False 13422725.282194106 15046760.750145195 13211341.612166122 12342312.905617207 11517186.795350742 14311644.709293706 11233802.201419016 13948258.332990006 13860792.032052396 14335106.94583046 0.9363533409911718 1.049644122433403 0.9216074677425968 0.8609850594248353 0.8034252439742456 0.9983633023021444 0.7836566719641045 0.9730139011656991 0.9669123561079518 1.0 23.773049331932192 -10.265355404888599 13.595926782370677 0.9999998445502247 0.9197817696272201 0.07939350198281947 0.07993630371839561 0.0 0.0 0.07905509225102073 0.01917367621140627 5.4280594444136224e-11 10.265355404888599 -0.08021807492300459 KQDASEKDSVPMGS(ph)PAFLLSLFDGGTR ddPTM_KYSE-520_SHP099_60min_R1 1 KQDASEKDSVPMGSPAFLLSLFDGGTR 27 2 Q9H0E9-2;B5MCW3 Q9H0E9-2 BRD8 Bromodomain-containing protein 8 1 KQDAS(0.017)EKDS(0.14)VPMGS(0.843)PAFLLSLFDGGTR 90.014 0.0036409999999999997 28469000.0 26702.0 29820.0 24248.0 25039.0 24005.0 23560.0 21101.0 21749.0 39274.0 22890.0 True False 25220.786830882676 28387.402439267462 25811.064878171735 27418.69903175013 25894.056930233415 23412.953300861747 23234.095005914533 21673.55779525475 32142.831616972097 22687.212408150517 1.1116741174346283 1.2512512303657508 1.1376922124156141 1.2085530182588584 1.1413503106679963 1.0319889847926185 1.024105323647763 0.9553204424298684 1.416781887466465 1.0 14.469591734615312 -6.035944160307257 5.974218220837103 1.079342788688219 1.1794375484694053 0.10845679874611225 0.12377065382514484 0.4188793391750185 43.33702382115451 0.0395269662454531 0.040708493171961097 9.205679267583503e-07 6.035944160307257 0.10009475978118632 KQDDS(ph)PPRPIIGPALPPGFIK ddPTM_KYSE-520_SHP099_60min_R1 6 KQDDSPPRPIIGPALPPGFIK 21 2 A0A0A0MRI1;Q8IXQ4-4;Q8IXQ4 A0A0A0MRI1 GPALPP1 GPALPP motifs-containing protein 1 1 KQDDS(1)PPRPIIGPALPPGFIK;KQDDS(1)PPRPIIGPALPPGFIK;KQDDS(1)PPRPIIGPALPPGFIK;KQDDS(1)PPRPIIGPALPPGFIK;KQDDS(1)PPRPIIGPALPPGFIK;KQDDS(1)PPRPIIGPALPPGFIK 135.3 1.3646e-06 30346200000.0 7667010.0 7130450.0 6967850.0 6168130.0 7101490.0 7026900.0 5948400.0 7132470.0 8994940.0 7318670.0 True False 7241705.671494487 6787892.47897634 7417008.759954179 6754347.2206840925 7660336.861049089 6983042.510603798 6549722.322789534 7107729.126301013 7361685.639984899 7253832.277639107 0.9983282483409491 0.935766394806358 1.0224952102653497 0.9311419070861697 1.0560399755399756 0.9626694198775377 0.9029326943469476 0.9798584877970675 1.014868466517797 1.0 22.790311957172246 -7.6701371250829755 5.9218042101757336 1.0069939338054028 0.9723012018387213 0.09190492268470873 0.04274596858404314 0.49024639956310884 24.93633166616001 0.030061166401553475 0.010818919602711884 2.1372871512674173e-08 7.6701371250829755 -0.034692731966681545 KQDEWIK ddPTM_KYSE-520_SHP099_60min_R1 2 KQDEWIK 7 1 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 0 ; 123.72 0.005764899999999999 4454200000.0 8253900.0 6684600.0 4348900.0 5012200.0 8325500.0 7534400.0 6694100.0 7023000.0 6024200.0 6528700.0 False True 7796039.713258267 6363461.782210846 4629237.052486026 5488557.981027125 8980669.484384846 7487375.014856221 7370804.9561201995 6998638.852180528 4930357.137723766 6470860.797251741 1.2047917514419946 0.9834026695356345 0.7153974096386253 0.8481959592390222 1.3878631863320336 1.157091034632704 1.139076420752348 1.0815622637335889 0.7619321898900612 1.0 22.625526211267125 -4.254402470182564 22.52418105725842 1.017273427576442 1.204792097649391 0.08587459327695424 0.19031968769731178 635.8529087460856 2035051.2259545627 0.0514560126070308 0.47168950431420925 5.566696319133225e-05 4.254402470182564 0.1875186700729492 KQDEWIKFDDDK ddPTM_KYSE-520_SHP099_60min_R1 1 KQDEWIKFDDDK 12 2 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 0 118.13 9.183299999999999e-05 229690000.0 537390.0 552350.0 392110.0 333890.0 463480.0 483170.0 403690.0 441790.0 419150.0 433480.0 False True 507579.9054395944 525814.2769057469 417386.03799818264 365622.8052123109 499953.23915953346 480154.35680718865 444498.92483473016 440257.5336045612 343042.92591164244 429639.70444233733 1.181408282780619 1.223849359053633 0.9714792038132052 0.8509986424250084 1.1636569758106075 1.1175744509703036 1.0345853054053273 1.0247133331776344 0.7984432592348616 1.0 18.712767798195884 -4.759698160989773 24.99909175708041 1.0027100701861436 1.2026288851409765 0.3894772712488713 0.10354832225609005 47.88985300048864 687510.3925097224 0.028083860445148056 0.06682135432156078 1.739009037522765e-05 4.759698160989773 0.199918814954833 KQDFDEDDILKELEELS(ph)LEAQGIK ddPTM_KYSE-520_SHP099_60min_R1 3 KQDFDEDDILKELEELSLEAQGIK 24 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KQDFDEDDILKELEELS(1)LEAQGIK;KQDFDEDDILKELEELS(1)LEAQGIK;KQDFDEDDILKELEELS(1)LEAQGIK 207.23 7.252999999999999e-17 193752000.0 120398.0 133226.0 132771.0 123192.0 126173.0 117799.0 92480.0 146093.0 187534.0 100658.0 True False 113719.28293253727 126825.62298369706 141329.63110111104 134900.1306409748 136102.09727383222 117063.77274567966 101828.78091782259 145586.2374813627 153482.5529474271 99766.24843073892 1.1398572635662954 1.2712277446389464 1.4166076536317471 1.3521620063184694 1.3642098346347948 1.1733805228423444 1.0206736498517888 1.4592734494014132 1.5384216141391727 1.0 16.606264204558048 -6.241625078952578 24.21542642117928 1.2534496538461324 1.3151217073687944 0.03616404433229714 0.17179355469232527 2772.2119958989156 3387972.3657908468 0.05977230508556844 0.05968502984914732 5.732907322092071e-07 6.241625078952578 0.06167205352266203 KQDYQEILDS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 4 KQDYQEILDSPIK 13 1 Q8TBE7 Q8TBE7 SLC35G2 Solute carrier family 35 member G2 1 KQDYQEILDS(1)PIK;KQDYQEILDS(1)PIK;KQDYQEILDS(1)PIK;KQDYQEILDS(1)PIK 215.45 1.9081e-11 3297330000.0 4663260.0 5282830.0 4436180.0 6080010.0 5184640.0 5458900.0 5633210.0 6382280.0 8025350.0 4990350.0 True False 4404579.671821659 5029034.917110513 4722143.260938965 6657852.322378331 5592641.671433671 5424828.980223861 6202669.841631568 6360141.36031535 6568148.742610057 4946139.381433557 0.8905086032058128 1.0167596440949729 0.9547129380673315 1.346070502454919 1.1307084657636026 1.0967804507465302 1.254042671121376 1.2858799297467367 1.3279344224032739 1.0 22.23787146454529 -5.241401604471933 24.369634196543686 1.2121525317493569 0.9602702561167931 0.5435970242787965 0.1056272539190875 454.3982113783474 552630.8461091004 0.02850061341522681 0.04927332020351689 5.73585805763802e-06 5.241401604471933 -0.2518822756325638 KQEAESWS(ph)PDACLGVK ddPTM_KYSE-520_SHP099_60min_R1 3 KQEAESWSPDACLGVK 16 1 E9PFK9;Q9UJ41;Q9UJ41-4;Q9UJ41-3;A0A0A0MSJ3;Q3HKR1 E9PFK9 RABGEF1 Rab5 GDP/GTP exchange factor 1 KQEAES(0.001)WS(0.999)PDACLGVK;KQEAESWS(1)PDACLGVK;KQEAES(0.007)WS(0.993)PDACLGVK 201.61 8.484799999999999e-13 3413420000.0 3782500.0 3320320.0 3189160.0 3221460.0 3449860.0 3445570.0 3086910.0 3249100.0 4168820.0 3336120.0 True False 3572677.184773189 3160806.8432980715 3394738.3564364137 3527626.5898327376 3721344.354981676 3424064.919560702 3398964.9881383656 3237829.6304456373 3411867.3754001576 3306564.5722620813 1.080480089438887 0.9559186806189318 1.0266662822537929 1.0668554969181878 1.1254413073312028 1.0355354763927191 1.0279445369527658 0.9792125814227117 1.0318465890614792 1.0 21.65690164485073 -6.931888534602178 3.2412913393779395 1.0039800080525547 1.0475975317819965 0.18188006374623367 0.04236980422065541 0.488517333198432 10.353584386575484 0.021621058027839476 0.013402999945497002 1.1697995915763514e-07 6.931888534602178 0.04361752372944183 KQEAEWK ddPTM_KYSE-520_SHP099_60min_R1 5 KQEAEWK 7 1 F8WF69;P09496-2;P09496-4;P09496-3;P09496;C9J8P9;P09496-5 F8WF69 CLTA Clathrin light chain A 0 ;;;; 122.52 0.005905 6067730000.0 8476310.0 8166680.0 5501340.0 4920710.0 7585190.0 8253920.0 6499750.0 6753080.0 6716360.0 6595350.0 False True 8006112.187194937 7774340.434363411 5855965.178855215 5388372.798934593 8182101.299172559 8202404.223643831 7156808.161446999 6729655.1416607145 5496838.329657449 6536920.330104653 1.2247529085407658 1.1892971065533773 0.8958293635439587 0.8242983739788562 1.251675236348118 1.254781121603866 1.0948287266845766 1.0294840386333692 0.8408911310028843 1.0 22.64017968350032 -7.547879658408813 4.72904001427372 0.9205539343193826 1.0990146491635484 0.21027154591460595 0.14185223300414393 0.34121453090968956 19.315942726034923 0.1089971090658657 0.040608945186895555 2.8321766740414083e-08 7.547879658408813 0.1784607148441658 KQEDS(ph)VTELTVEDSGESLEDLMAK ddPTM_KYSE-520_SHP099_60min_R1 2 KQEDSVTELTVEDSGESLEDLMAK 24 1 Q9GZZ9-2;Q9GZZ9 Q9GZZ9-2 UBA5 Ubiquitin-like modifier-activating enzyme 5 1 KQEDS(0.679)VT(0.32)ELT(0.001)VEDSGESLEDLMAK;KQEDS(0.523)VT(0.443)ELT(0.035)VEDSGESLEDLMAK 117.94 0.00014527 145649000.0 92228.0 81546.0 62506.0 68469.0 70175.0 75998.0 57287.0 80291.0 97394.0 81456.0 True False 87111.9289880401 77628.40775695864 66535.23677313596 74976.27317404447 75697.37325886825 75523.66829197324 63078.12902724162 80012.4892610603 79709.70470294286 80734.3632118091 1.0789944395733853 0.9615287056057915 0.8241253677641415 0.9286785724356541 0.9376103340317907 0.9354587722929647 0.7813045959346232 0.991058653068769 0.9873082728580144 1.0 16.300895242436084 -13.01258902481905 7.544977196662622 1.0174143615461522 0.9343887924511163 0.0 0.08221986802295406 0.0 0.0 0.0 0.019021152865908244 9.714288006756146e-14 13.01258902481905 -0.08302556909503589 KQEDSVT(ph)ELTVEDSGESLEDLMAK ddPTM_KYSE-520_SHP099_60min_R1 2 KQEDSVTELTVEDSGESLEDLMAK 24 1 Q9GZZ9-2;Q9GZZ9 Q9GZZ9-2 UBA5 Ubiquitin-like modifier-activating enzyme 5 1 KQEDS(0.407)VT(0.589)ELT(0.004)VEDSGESLEDLMAK;KQEDS(0.32)VT(0.674)ELT(0.006)VEDSGESLEDLMAK 160.41 6.3411e-10 96593000.0 116963.0 112461.0 107279.0 91118.0 84253.0 112922.0 84306.0 105174.0 142198.0 113608.0 True False 110474.82923004017 107058.20475259762 114194.37599246901 99777.82732437448 90883.23176600524 112217.21191171097 92828.4732272703 104809.17594179623 116378.42771987058 112601.52150568648 0.9811131124410347 0.9507704986667617 1.0141459410626354 0.8861143791856809 0.8071225908027855 0.996586994661914 0.8243980364206923 0.9307971556716778 1.033542230723706 1.0 16.78086679611675 -10.05256031503324 7.3310404960171125 1.0000000077196143 0.9318737769230265 0.061979392287280555 0.07299558693853142 9.318128483864461e-09 1.161574510977044e-09 0.07143360137911357 0.017325191093755923 8.860121653051413e-11 10.05256031503324 -0.06812623079658775 KQEDSVTELTVEDSGESLEDLMAK ddPTM_KYSE-520_SHP099_60min_R1 4 KQEDSVTELTVEDSGESLEDLMAK 24 1 Q9GZZ9-2;Q9GZZ9 Q9GZZ9-2 UBA5 Ubiquitin-like modifier-activating enzyme 5 0 ;;; 279.97 2.9608999999999995e-38 698719000.0 936892.0 768220.0 469568.0 874095.0 679675.0 544353.0 617589.0 849284.0 636614.0 500743.0 False True 884920.733112101 731313.5580782718 499837.10461536393 957168.7259937547 733161.5556782503 540955.4910095072 680020.9232077989 846338.0320283748 521020.94533297006 496306.806592159 1.7830114787027014 1.473511038665303 1.0071131364235066 1.9285827098887842 1.4772345370647457 1.0899618619456863 1.3701623958718085 1.7052718616528157 1.0497960906692139 1.0 18.920872715026743 -6.022585847763382 24.344886807298156 1.293789256377924 1.5289434899245349 0.1891774647788268 0.29362951372284724 1207.1282967431227 1301140.55357173 0.09694103372094458 0.09772770434188263 9.493233262220758e-07 6.022585847763382 0.2351542335466108 KQEELQQLEQQRR ddPTM_KYSE-520_SHP099_60min_R1 2 KQEELQQLEQQRR 13 2 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 97.631 0.0011526 1314600000.0 1752230.0 1752740.0 1293080.0 936260.0 1767120.0 1523620.0 1075930.0 1188940.0 1475370.0 1095700.0 False True 1655030.3089160942 1668535.7394836245 1376434.005801153 1025241.8689031672 1906182.2904625759 1514110.5224218587 1184695.5044648896 1184815.8446406822 1207479.99905108 1085992.9504417004 1.5239788695156373 1.5364148899907586 1.2674428551689243 0.9440594144613699 1.7552437054838008 1.3942176344754653 1.0908869196462505 1.090997730840507 1.1118672534291938 1.0 20.0505833074611 -6.764181153551264 7.265424261541123 1.0799446855858026 1.3989972667647381 0.39927646656721627 0.19830480881283996 0.1527569829916919 47.17136322069564 0.08424734034486124 0.06034980661604578 1.7211504964139783e-07 6.764181153551264 0.31905258117893553 KQEGPATQVDSAVGTLPAT(ph)SPQSTSVQAK ddPTM_KYSE-520_SHP099_60min_R1 2 KQEGPATQVDSAVGTLPATSPQSTSVQAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 KQEGPATQVDSAVGTLPAT(0.965)S(0.034)PQS(0.001)T(0.001)SVQAK;KQEGPATQVDSAVGTLPAT(0.5)S(0.5)PQSTSVQAK 210.21 6.005599999999999e-22 2246860000.0 2715600.0 3046100.0 2295200.0 2198800.0 2032100.0 2854300.0 2163900.0 2864700.0 3281200.0 3008200.0 True False 2564960.2545856116 2899760.783710688 2443152.264449843 2407773.2909066756 2192014.7089326135 2836485.254951174 2382648.129628852 2854763.0243260083 2685416.7923208447 2981549.688344183 0.860277547817784 0.9725683241325027 0.8194236285918344 0.8075576604741554 0.7351930834833609 0.9513459614776465 0.799130780527782 0.9574762532001987 0.90067819524155 1.0 21.50763094919557 -7.779357074118409 1.0282367409909974 0.9928785368865367 0.8496540055338051 0.2949021730455623 0.0709053832037534 0.6461861468003456 1.4486885914389174 0.06804289270926457 0.023291561291028325 1.6620455653123818e-08 7.779357074118409 -0.1432245313527316 KQEGPATQVDSAVGTLPATS(ph)PQSTSVQAK ddPTM_KYSE-520_SHP099_60min_R1 6 KQEGPATQVDSAVGTLPATSPQSTSVQAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06 E7ETY2 TCOF1 Treacle protein 1 KQEGPATQVDSAVGTLPAT(0.146)S(0.797)PQS(0.017)T(0.03)S(0.01)VQAK;KQEGPATQVDSAVGTLPAT(0.001)S(0.944)PQS(0.044)T(0.009)S(0.002)VQAK;KQEGPATQVDSAVGTLPAT(0.002)S(0.965)PQS(0.026)T(0.006)S(0.001)VQAK;KQEGPATQVDSAVGTLPAT(0.072)S(0.917)PQS(0.009)T(0.001)SVQAK;KQEGPATQVDSAVGTLPAT(0.133)S(0.863)PQS(0.002)T(0.001)SVQAK;KQEGPATQVDSAVGTLPAT(0.044)S(0.941)PQS(0.012)T(0.002)S(0.001)VQAK 189.91 1.6404e-15 52402000000.0 11366100.0 13398800.0 9767510.0 8341340.0 8513210.0 12645900.0 9141420.0 11834400.0 14011900.0 13012100.0 True False 10735599.7752414 12755101.535991164 10397139.323168553 9134098.445684688 9183151.193461051 12566972.247341577 10065523.945261708 11793349.22856973 11467692.171254545 12896822.917260623 0.8324220503076983 0.9890111400165242 0.8061783425166995 0.7082440771874098 0.7120475525154856 0.9744238815997399 0.780465391347693 0.9144383313805103 0.889187379312359 1.0 23.6205123712525 -7.9897894407163355 0.8703056395146288 0.9976659498611152 0.8274811652604187 0.250990829486171 0.08996170974724307 0.9719196904019023 1.6706354246173916 0.09135829149945507 0.0325886548587788 1.0237892363929746e-08 7.9897894407163355 -0.17018478460069653 KQEKT(ph)PKT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 KQEKTPKTPK 10 3 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 2 KQEKT(1)PKT(1)PK 95.98100000000001 0.0021259 7933900000.0 10050000.0 11179000.0 8826400.0 6748500.0 8784700.0 8455500.0 6263100.0 6149500.0 12063000.0 8966700.0 True False 9492506.465821693 10641944.059978915 9395363.866739318 7389875.410989488 9476005.911894247 8402726.088091534 6896235.269965567 6128168.819804086 9872663.283483602 8887262.01398705 1.0681024651779243 1.1974378659288196 1.057171922235735 0.8315131701258579 1.0662458130502526 0.9454797298501003 0.7759684882826744 0.6895451951522734 1.1108779360781416 1.0 23.083307591613167 -5.071126458577584 4.788368634057361 0.9064485574476357 1.1327338508858151 0.3358934554868367 0.12488998581166401 0.2268081200044362 9.793801607537523 0.034853773684185345 0.06397600702487033 8.489332452727805e-06 5.071126458577584 0.22628529343817938 KQELANSSDATLPDRPLS(ph)PPLTAPPTMK ddPTM_KYSE-520_SHP099_60min_R1 2 KQELANSSDATLPDRPLSPPLTAPPTMK 28 2 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 KQELANSSDAT(0.001)LPDRPLS(0.999)PPLT(0.001)APPTMK;KQELANSSDATLPDRPLS(1)PPLTAPPTMK 180.47 4.2443000000000004e-11 1270340000.0 529860.0 510720.0 379250.0 428070.0 359320.0 611870.0 459730.0 601450.0 633010.0 615400.0 True False 500467.60955027735 486184.24459365074 403697.06182145467 468753.6440960619 387596.4397488633 608051.0923683471 506203.99493242416 599363.7103294855 518071.34088352445 609948.0347739554 0.8205086024020865 0.7970912551162312 0.6618548446853565 0.7685140657429618 0.6354581335646162 0.9968899934134369 0.8299133140416161 0.9826471701832888 0.8493696369978795 1.0 19.218326810280534 -6.266999276902101 24.999467351281474 0.9243138029896556 0.7376522697724325 0.6268507199046696 0.07514392273142485 316.70609373404943 1424029.244925569 0.025177531373037517 0.02282564488418655 5.407552232992736e-07 6.266999276902101 -0.18666153321722312 KQELDLNS(ph)SMR ddPTM_KYSE-520_SHP099_60min_R1 2 KQELDLNSSMR 11 1 Q8N3R9-2;Q8N3R9;G3V2B0;G3V2H1 Q8N3R9-2 MPP5 MAGUK p55 subfamily member 5 1 KQELDLNS(0.5)S(0.5)MR;KQELDLNS(0.593)S(0.407)MR 83.729 0.0035141999999999994 830870000.0 2622160.0 2325830.0 2365910.0 2673300.0 2615650.0 2578420.0 2530840.0 2890120.0 2981920.0 3018440.0 True False 2476703.557653631 2214093.6356579955 2518420.344189844 2927369.628243046 2821486.7739872984 2562327.124363665 2786682.005818149 2880094.848279078 2440478.4960859967 2991698.969910783 0.8278585454496747 0.7400790179514696 0.8418027246454368 0.9784973881681499 0.9431051728013394 0.8564789272364783 0.9314713926251919 0.9626954039312875 0.8157500205171964 1.0 21.512533585303103 -5.0289077982430195 5.573458882709411 0.9228013561984973 0.7846424160901148 0.5250186869401565 0.055587043496157944 0.13066827351217128 12.200885408691148 0.014514902752946925 0.027166220221835697 9.356042840908255e-06 5.0289077982430195 -0.1381589401083826 KQELEEICHDLEAR ddPTM_KYSE-520_SHP099_60min_R1 9 KQELEEICHDLEAR 14 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ;;;;;;;; 217.48 1.4043e-13 34193280000.0 24081270.0 21283000.0 15235490.0 13961440.0 23593750.0 20903420.0 16610000.0 18552480.0 17635830.0 17630090.0 False True 22745433.948278386 20260532.733565684 16217594.063045891 15288331.05993999 25450443.89492586 20772954.002050042 18289100.897978336 18488125.7770614 14433607.835095618 17473901.11860247 1.3016803628391782 1.1594739260597398 0.9281038019484309 0.8749237480612871 1.4564832273104529 1.1887988755948404 1.0466524203063057 1.058042256939362 0.82600947190492 1.0 24.058698395887173 -7.388775167460272 2.131408686264584 0.9216469348088283 1.138074187952695 0.22001766176851112 0.16439891134814252 0.5723138006380527 4.798760832733846 0.13561060669006367 0.0498396226953639 4.085308263940509e-08 7.388775167460272 0.21642725314386668 KQELEEILHDLESR ddPTM_KYSE-520_SHP099_60min_R1 4 KQELEEILHDLESR 14 1 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 0 ;;; 115.04 0.0002807 3379380000.0 1370963.0 1208465.0 838030.0 877452.0 1309582.0 1103593.0 864515.0 935855.0 1006687.0 850729.0 False True 1294912.9494430146 1150408.5274570535 892050.7546954093 960844.7742644375 1412638.6528976865 1096705.0667299628 951908.6130533243 932608.7374351983 823898.0173141205 843192.2029171466 1.5357269018416846 1.3643491050759804 1.0579447385889356 1.1395323283828462 1.6753459626529474 1.300658453595457 1.1289343162330692 1.1060452577819175 0.9771176897316235 1.0 19.685502000727908 -6.8946596900800765 2.6228375004731004 1.0366068234285786 1.3402320983082665 0.4321966634157697 0.1676559402685104 0.3197918259503379 4.441083756860726 0.08953248607416554 0.05470355542465241 1.2745013796201755e-07 6.8946596900800765 0.30362527487968793 KQELLEALTK ddPTM_KYSE-520_SHP099_60min_R1 1 KQELLEALTK 10 1 B1AHC9;P12956-2;P12956 B1AHC9 XRCC6 X-ray repair cross-complementing protein 6 0 102.66 0.029588999999999997 0.0 677450.0 602290.0 458820.0 464980.0 624790.0 628730.0 499560.0 638290.0 599830.0 498610.0 False True 639870.4980369062 573355.084344279 488396.27133795636 509171.5593986649 673957.4184311834 624805.8628544483 550060.400035764 636075.9209680062 490915.99248379085 494192.7033127097 1.2947793315192195 1.160185248590119 0.9882709074094007 1.0303097475651661 1.3637542883847968 1.2642960097674503 1.1130484046983247 1.2871009966440505 0.9933695685772895 1.0 18.91471418406692 -7.7835840900801845 24.76736459820557 0.9966843940105113 1.1808366408029076 0.30940231084402525 0.11379060360132935 332.329381151505 371676.32497253286 0.11642450637375791 0.03016189684156145 1.6459472396541783e-08 7.7835840900801845 0.18415224679239628 KQFS(ph)LENVQEGEILHDAK ddPTM_KYSE-520_SHP099_60min_R1 4 KQFSLENVQEGEILHDAK 18 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 KQFS(1)LENVQEGEILHDAK;KQFS(1)LENVQEGEILHDAK;KQFS(1)LENVQEGEILHDAK;KQFS(1)LENVQEGEILHDAK 174.62 7.3459e-09 10027480000.0 2924656.0 2643592.0 2664782.0 2461430.0 2441319.0 2416157.0 2337333.0 2337521.0 3154790.0 2070294.0 True False 2762419.5015228093 2516589.87220751 2836558.111521949 2695363.5671440884 2633436.9160950044 2401076.8679350675 2573613.429811824 2329412.6852325 2581959.6617840673 2051952.8058243615 1.3462392963823655 1.2264365267389679 1.3823700542578397 1.3135602141986107 1.2833808402513598 1.1701423449504957 1.2542264239736685 1.1352174760650358 1.2582938820304779 1.0 20.96856611918428 -11.647287597022183 0.12012944676058165 0.4950155091422795 1.4279098411185709 0.7045113911427681 0.05776859400998504 40.84749675145785 0.5757893976996841 6.0907356227104845 0.6538093894990001 2.252746911657176e-12 11.647287597022183 0.9328943319762915 KQGGLGPMNIPLVSDPK ddPTM_KYSE-520_SHP099_60min_R1 2 KQGGLGPMNIPLVSDPK 17 1 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ; 121.27 0.00023618 1012400000.0 3099300.0 2947600.0 2395600.0 2382300.0 2811400.0 3070300.0 2212900.0 2750000.0 2620100.0 2216900.0 False True 2927375.650698624 2805992.871562199 2550024.2090955237 2608713.0757353865 3032641.185322149 3051137.1188300443 2436601.527822769 2740460.891854823 2144355.887346048 2197259.990722099 1.3322846013031817 1.277041808165837 1.1605473270632365 1.1872573508599997 1.3801922385732395 1.3886099650079782 1.1089272721986867 1.2472173995914835 0.9759226929906166 1.0 21.06727415603278 -7.656744239739079 1.623740499239119 0.9766689854883712 1.270336668903556 0.57899104730841 0.090280120692585 0.2807969766089949 1.374678271268153 0.08665231547876832 0.026842087782335194 2.2042241700359634e-08 7.656744239739079 0.2936676834151848 KQGGLGPMNIPLVSDPKR ddPTM_KYSE-520_SHP099_60min_R1 2 KQGGLGPMNIPLVSDPKR 18 2 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ; 158.15 1.4279000000000002e-07 1729530000.0 1061620.0 1137880.0 956810.0 645230.0 1099900.0 881550.0 573910.0 706810.0 954150.0 671640.0 False True 1002729.8223129967 1083214.5368072984 1018487.5035501276 706552.4652045261 1186455.872425068 876047.9194556305 631926.4236218381 704358.241080694 780900.4121641271 665689.7921280136 1.5063019354819394 1.627206169625317 1.529973143037576 1.0613839562506835 1.7822954271723457 1.3160002298595628 0.9492806275453858 1.0580877901538326 1.1730695308813723 1.0 19.344490520176436 -6.56936478801483 5.377472613056297 1.0550249714924047 1.4918323132468674 0.5912400495943614 0.17855318213741794 0.14231210790502766 9.470126234159576 0.06897916645792607 0.05357137266675677 2.6954744029144266e-07 6.56936478801483 0.4368073417544627 KQGGS(ph)PDEPDSK ddPTM_KYSE-520_SHP099_60min_R1 10 KQGGSPDEPDSK 12 1 V9GZ50;Q9ULX6-2;Q9ULX6 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 KQGGS(1)PDEPDSK;KQGGS(1)PDEPDSK;KQGGS(1)PDEPDSK;KQGGS(1)PDEPDSK;KQGGS(1)PDEPDSK;KQGGS(1)PDEPDSK;KQGGS(1)PDEPDSK;KQGGS(0.999)PDEPDS(0.001)K;KQGGS(1)PDEPDSK;KQGGS(1)PDEPDSK 227.34 3.1313e-11 14811880000.0 29903340.0 25142680.0 23896790.0 24952490.0 26092350.0 25378510.0 25123360.0 24704650.0 30691000.0 25566760.0 True False 28244542.119369593 23934787.912867922 25437215.319615863 27323967.147360336 28145669.49983653 25220113.305409696 27663074.40916514 24618955.335258663 25118288.057149526 25340258.397038274 1.1146114485821805 0.9445360634390918 1.0038262010220433 1.0782828935380515 1.110709648609035 0.9952587266575538 1.0916650483879182 0.9715352917686145 0.9912404074018957 1.0 24.59492790006457 -7.283818942994084 24.93760054229466 0.986040880482475 1.0442032194975348 0.2193085792593943 0.052140376604215125 1349.9035088250218 1504192.640131914 0.028820922340803523 0.013859614855467524 5.202128276243422e-08 7.283818942994084 0.05816233901505985 KQHEEFDLS(ph)PDQWR ddPTM_KYSE-520_SHP099_60min_R1 2 KQHEEFDLSPDQWR 14 1 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 KQHEEFDLS(1)PDQWR;KQHEEFDLS(1)PDQWR 107.72 0.00041955 0.0 339094.0 336826.0 333609.0 270478.0 282684.0 280533.0 253294.0 268298.0 410442.0 267608.0 True False 320283.7798528697 320644.373373867 355113.96993327286 296184.1477978243 304929.6225480566 278782.0894885673 278899.42943121743 267367.33685922425 335916.079200827 265237.2013158735 1.2075371714974503 1.2088966848658933 1.3388543091674545 1.1166764930726885 1.1496487711198289 1.0510670754535791 1.0515094717014204 1.0080310587383026 1.266474225841274 1.0 18.016923611840358 -5.419517966214525 5.841130687108334 1.0885246157907313 1.2470527082131306 0.45835838483916935 0.08002702080263004 0.2098893491146019 9.886192889029841 0.022357911121172386 0.0332881903007387 3.8061161185356434e-06 5.419517966214525 0.1585280924223993 KQHS(ph)YIEQGKK ddPTM_KYSE-520_SHP099_60min_R1 2 KQHSYIEQGKK 11 2 A0A2R8Y595;A0A2R8YFL0;P49711-2;P49711 A0A2R8Y595 CTCF Transcriptional repressor CTCF 1 KQHS(0.999)Y(0.001)IEQGKK;KQHS(1)YIEQGKK 119.87 0.00014392 1768490000.0 1558790.0 1516340.0 1597220.0 1508420.0 1443300.0 1399250.0 1581060.0 1363620.0 1893100.0 1127790.0 True False 1472320.811329173 1443492.7503272581 1700179.3568423588 1651779.783276991 1556879.4987463388 1390516.7617245682 1740888.9744586137 1358889.920491301 1549360.7611674352 1117798.658007344 1.3171610117638017 1.2913709816940702 1.5210067973003314 1.4777077888262582 1.3928085237834575 1.2439778414150078 1.5574262520246969 1.2156839791825667 1.386082144640807 1.0 20.09222891738589 -9.120085591717746 0.60112114899971 0.9711795933954614 1.3959985286052927 0.5279843189309609 0.1079919205943765 4.338813275936698 1.6678942293381718 0.4060836003057391 0.04444874892205672 7.584280876128261e-10 9.120085591717746 0.42481893520983127 KQHYLS(ph)S(ph)EDEPDDNPDVLDSR ddPTM_KYSE-520_SHP099_60min_R1 4 KQHYLSSEDEPDDNPDVLDSR 21 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 2 KQHY(0.516)LS(0.606)S(0.878)EDEPDDNPDVLDSR;KQHY(0.006)LS(0.997)S(0.997)EDEPDDNPDVLDSR;KQHY(0.315)LS(0.843)S(0.843)EDEPDDNPDVLDSR;KQHY(0.024)LS(0.982)S(0.994)EDEPDDNPDVLDSR 145.87 8.2177e-07 3588960000.0 3335800.0 3528090.0 3006430.0 2761990.0 3394560.0 3034790.0 2696260.0 2825400.0 4256390.0 2902140.0 True False 3150756.5242475593 3358595.2606289475 3200229.288258081 3024488.6991774268 3661692.559595632 3015848.749911805 2968824.273761771 2815599.3468533186 3483536.8708602083 2876429.297430755 1.0953707525722378 1.1676265652101605 1.1125701198762459 1.0514733325372951 1.2729993269315811 1.0484696260761843 1.0321214140092176 0.9788522698500637 1.2110629223432419 1.0 21.455847578569575 KQIS(ph)VR ddPTM_KYSE-520_SHP099_60min_R1 9 KQISVR 6 1 P11216 P11216 PYGB Glycogen phosphorylase, brain form 1 KQIS(1)VR;KQIS(1)VR;KQIS(1)VR;KQIS(1)VR;KQIS(1)VR;KQIS(1)VR;KQIS(1)VR;KQIS(1)VR;KQIS(1)VR 133.12 0.0045997 142915500000.0 108261700.0 87934000.0 76712100.0 57722900.0 72168400.0 80405600.0 77506200.0 74890500.0 83099000.0 84948000.0 True False 102256207.68665159 83709518.64837517 81657084.70969975 63208867.06097721 77847642.4979737 79903758.82545704 85341283.08361757 74630722.33507413 68010316.35531817 84195426.80854398 1.2145102360390296 0.9942288057845025 0.9698517818002599 0.7507399090061136 0.924606542763839 0.9490273029573688 1.0136094835373803 0.8863987649208134 0.8077673447747952 1.0 26.32723853764794 -4.240640666119423 1.7728007250534425 0.9073010863061245 1.3264094175413388 0.5842690496781955 0.07723178651835727 0.6906603509980112 2.0955176864948393 0.02185833793877751 0.49540268680892796 5.7459168092224716e-05 4.240640666119423 0.4191083312352143 KQIT(ph)MEELVR ddPTM_KYSE-520_SHP099_60min_R1 22 KQITMEELVR 10 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR;KQIT(1)MEELVR 204.35 1.1255e-06 61668140000.0 30448450.0 37178470.0 29588830.0 26771830.0 31341320.0 24998100.0 25867420.0 28449900.0 32282770.0 29367560.0 True False 28759413.781019725 35392360.4951788 31496173.32560189 29316216.673955828 33807703.57628257 24842077.585325636 28482351.255290918 28351213.937156565 26421032.7504058 29107386.26601593 0.9880452170519181 1.2159236893248926 1.082068071579995 1.0071744816257762 1.1614819437001271 0.8534630130747873 0.9785265841112376 0.9740212906116471 0.9077088718629966 1.0 24.79488196089122 -6.256487427288712 24.999773135286354 0.943356696817421 1.092735913881012 0.5085843958548211 0.07282396988485783 347.75531097108086 1755633.3943356108 0.02363774348899502 0.022931839517180475 5.540035819647668e-07 6.256487427288712 0.14937921706359103 KQKEDVEVVGGS(ph)DGEGAIGLSSDPK ddPTM_KYSE-520_SHP099_60min_R1 2 KQKEDVEVVGGSDGEGAIGLSSDPK 25 2 Q8NHZ8 Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 1 KQKEDVEVVGGS(1)DGEGAIGLSSDPK;KQKEDVEVVGGS(0.989)DGEGAIGLS(0.008)S(0.003)DPK 131.23 3.6974e-05 477930000.0 457710.0 482580.0 513470.0 389080.0 400520.0 367550.0 412070.0 433090.0 574520.0 396380.0 True False 432319.9138777356 459396.13243265246 546569.0977810485 426058.0462188327 432038.6453529304 365255.98411424994 453726.05701564904 431587.7118739657 470201.65047061257 392868.3815789735 1.100419209456874 1.169338521431269 1.3912269946090798 1.0844803659344306 1.0997032736931593 0.929715908025617 1.1549060150681585 1.098555475855236 1.1968426896072157 1.0 18.58368653743635 -5.452829244024664 24.9999652746519 1.0821134605787086 1.2190002751200997 0.30095031808136685 0.09756983650415628 209.15525203143767 74644.61368663386 0.027786937709525377 0.04121467524926342 3.5250944351931224e-06 5.452829244024664 0.13688681454139107 KQMVIDVLHPGK ddPTM_KYSE-520_SHP099_60min_R1 2 KQMVIDVLHPGK 12 1 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4 E7ETK0 RPS24 40S ribosomal protein S24 0 ; 139.78 7.3585e-05 2256700000.0 4272400.0 3877300.0 2926470.0 2374620.0 4134400.0 3985700.0 2616470.0 3302300.0 3173200.0 2783580.0 False True 4035401.4551817486 3691028.688054053 3115114.9387175576 2600303.1708444613 4459753.758481867 3960823.7678796547 2880968.321886413 3290845.0920626167 2597026.8698624 2758919.646792469 1.4626745145960747 1.3378529136741106 1.129106801765395 0.9425077580159263 1.6164855557380202 1.4356430324038338 1.0442378505788807 1.1928020795707357 0.94132022760493 1.0 21.39567200830526 -6.778020415198359 24.97408595853734 1.0606567767378792 1.3090347596178233 0.3493451584635814 0.18367359330015415 339.8802835784134 511917.53662018484 0.0824219321090951 0.0557435662107996 1.6671688408839495e-07 6.778020415198359 0.24837798287994417 KQNS(ph)PVAPTAQPK ddPTM_KYSE-520_SHP099_60min_R1 1 KQNSPVAPTAQPK 13 1 Q6P1N0;Q6P1N0-2 Q6P1N0 CC2D1A Coiled-coil and C2 domain-containing protein 1A 1 KQNS(1)PVAPTAQPK 114.69 0.00014252 1482300000.0 2950600.0 2846600.0 2443800.0 2214900.0 2295400.0 2944900.0 2493800.0 2644800.0 3094600.0 2809000.0 True False 2786924.3361247247 2709845.06316629 2601331.2582182474 2425403.430066034 2476034.920960544 2926519.7867448116 2745897.6411425844 2635625.8061009618 2532698.6485176417 2784114.4453689326 1.0010092583515977 0.9733238759900185 0.9343478184042596 0.8711579490205316 0.889343800172854 1.0511492412292012 0.9862732639134438 0.9466657559587878 0.9096963139322475 1.0 21.40878708596075 -6.228473096766177 24.99903019462898 0.9758933641826911 0.9325765525558538 0.17484371453511904 0.04855559911591459 1373.090641767029 1041243.7105021576 0.017636713675282727 0.017635163756940634 5.909175700029385e-07 6.228473096766177 -0.043316811626837315 KQNSNSQS(ph)TPGSSGQR ddPTM_KYSE-520_SHP099_60min_R1 1 KQNSNSQSTPGSSGQR 16 1 A8CG34-2;A8CG34;Q96HA1-2;Q96HA1-3;Q96HA1;A6NF01 A8CG34-2 POM121C;POM121;POM121B Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121;Putative nuclear envelope pore membrane protein POM 121B 1 KQNSNS(0.001)QS(0.571)T(0.418)PGS(0.008)S(0.001)GQR 47.047 0.067093 28316000.0 21160.0 21666.0 13365.0 12702.0 20717.0 21533.0 16719.0 15993.0 16103.0 26574.0 True False 19986.21261858577 20625.13283867099 14226.52928475608 13909.194261004455 22347.31003639432 21398.604559739222 18409.1196817158 15937.524015794257 13179.101123595809 26338.575034259153 0.7588190550395864 0.783077019612619 0.5401404315249145 0.5280921326576121 0.84846313846997 0.8124435179923589 0.6989413686112731 0.6051019842593601 0.5003725944343408 1.0 14.684889674778736 -5.762841673849083 24.99993871936383 0.7256227118702256 0.6538288349993822 0.07588485956621194 0.1484412759607695 142.9983356839695 2549373.3407008215 0.04743807538302464 0.05677026286589111 1.7264671771758489e-06 5.762841673849083 -0.07179387687084349 KQPAS(ph)PDGR ddPTM_KYSE-520_SHP099_60min_R1 6 KQPASPDGR 9 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 KQPAS(1)PDGR;KQPAS(1)PDGR;KQPAS(1)PDGR;KQPAS(1)PDGR;KQPAS(1)PDGR;KQPAS(1)PDGR 89.301 0.0045119 2316907000.0 3470660.0 3001140.0 2574889.0 2944340.0 3072580.0 3162370.0 3295450.0 3367400.0 3228730.0 3341980.0 True False 3278135.5712108184 2856960.7295970214 2740870.4649080667 3224169.188351897 3314374.5654112333 3142632.4758084123 3628586.246492631 3355719.275357067 2642474.021659785 3312372.6572211 0.989663878568843 0.8625118684543954 0.8274644034791386 0.9733715140182323 1.0006043728762732 0.9487557110934823 1.0954643761420302 1.0130862745897475 0.797758674857761 1.0 21.65943356114714 -5.387404061965109 7.821579884238951 0.9816747057649317 0.8903897802138477 0.1793619377630452 0.08008842566531899 0.4404408950816253 25.967936573264392 0.022891973639753833 0.0340029328588215 4.098226318836585e-06 5.387404061965109 -0.09128492555108392 KQPPKEPSEVPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 KQPPKEPSEVPTPK 14 2 P17096-2 P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPKEPSEVPT(1)PK;KQPPKEPSEVPT(1)PK;KQPPKEPSEVPT(1)PK;KQPPKEPSEVPT(1)PK;KQPPKEPS(0.001)EVPT(0.999)PK;KQPPKEPSEVPT(1)PK;KQPPKEPSEVPT(1)PK 163.45 8.485e-08 35859650000.0 18603590.0 16331360.0 15466800.0 12856320.0 14088490.0 15191120.0 13862190.0 15036840.0 17953530.0 16922800.0 True False 17571611.777362783 15546776.951728877 16463814.675754981 14078180.78740645 15197174.010457158 15096306.585220164 15263515.447137015 14984680.711664844 14693621.523660878 16772877.157739177 1.0476206086834101 0.9268998279496392 0.9815736752211536 0.8393420314838849 0.9060564784167054 0.9000427561263438 0.9100117590794059 0.8933876144648659 0.8760346472150182 1.0 23.999626848949816 -3.3349836242018878 0.965508700174949 0.9025203326409885 1.6711081894224002 0.4535928721925755 0.04417242748303854 8.37158500812839 1.634421079006098 0.013373098211178937 10.242104365048544 0.0004623984565759191 3.3349836242018878 0.7685878567814117 KQPPVS(ph)PGTALVGS(ph)QKEPSEVPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 3 KQPPVS(0.916)PGT(0.084)ALVGS(0.985)QKEPS(0.346)EVPT(0.669)PK 83.185 0.018736000000000003 764800000.0 521010.0 554890.0 393070.0 470080.0 474810.0 388310.0 460910.0 484660.0 608700.0 467200.0 True False 492108.53669231496 528232.2514931296 418407.9211342365 514756.26186529506 512174.8457006511 385886.4132537193 507503.28084811475 482978.8275804944 498175.42407829437 463060.97147610015 1.0627294611411966 1.1407401703695366 0.9035698253741337 1.1116381936149915 1.1060635148498708 0.8333382362664437 1.0959750704758076 1.0430134633046315 1.0758311642854717 1.0 18.820842640827006 KQPPVS(ph)PGTALVGSQK ddPTM_KYSE-520_SHP099_60min_R1 9 KQPPVSPGTALVGSQK 16 1 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.982)PGT(0.018)ALVGSQK;KQPPVS(0.997)PGT(0.003)ALVGSQK;KQPPVS(0.955)PGT(0.045)ALVGSQK;KQPPVS(0.999)PGT(0.001)ALVGSQK;KQPPVS(0.999)PGT(0.001)ALVGSQK;KQPPVS(0.842)PGT(0.158)ALVGSQK;KQPPVS(1)PGTALVGSQK;KQPPVS(0.992)PGT(0.008)ALVGSQK;KQPPVS(0.975)PGT(0.025)ALVGSQK 261.66 8.310499999999999e-28 53918940000.0 43048110.0 40227230.0 34670390.0 31747620.0 30867440.0 39475660.0 34959290.0 43785120.0 44884570.0 46638340.0 True False 40660145.52402026 38294653.488496736 36905298.81398533 34764904.25953002 33296531.916290984 39229277.7631874 38493316.20299126 43633239.6382438 36734663.535932116 46225160.59167948 0.8796106926092341 0.8284374353345083 0.7983811920088446 0.7520775225989739 0.720311871069721 0.8486563867178573 0.8327351535457953 0.9439283515674313 0.7946897980608497 1.0 25.462174995943055 -6.927168334261635 1.9409418959219418 0.9029171895930227 0.796696269181207 0.35607127688293727 0.06423229877522603 0.4108050598680905 3.1035444582671174 0.03675281787078815 0.02024390595482704 1.1825830929882947e-07 6.927168334261635 -0.10622092041181574 KQPPVS(ph)PGTALVGSQKEPS(ph)EVPTPK ddPTM_KYSE-520_SHP099_60min_R1 1 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 2 KQPPVS(0.994)PGT(0.006)ALVGS(0.056)QKEPS(0.61)EVPT(0.335)PK 105.04 0.0011045999999999999 5829900000.0 2101000.0 2135800.0 2117900.0 1682900.0 1755200.0 1598500.0 1438200.0 1625300.0 2300700.0 1644600.0 True False 1984453.3417603385 2033192.962098839 2254423.2227598154 1842842.3100176645 1893324.254278098 1588523.16856653 1583587.291479375 1619662.213647873 1882950.8759272727 1630030.1234794406 1.2174335389117539 1.2473345938900886 1.383056171960524 1.130557210859366 1.1615271564654481 0.9745360810729619 0.9715079915818186 0.9936394366691602 1.1551632382768184 1.0 20.63646719549392 -5.7966316918391385 1.7551954875017297 1.0186234840752053 1.2735337968121434 0.6860849783729946 0.07335922905553273 0.1988516790847784 1.2661926720637666 0.026440489362306977 0.034123493177986006 1.5972331239582292e-06 5.7966316918391385 0.2549103127369381 KQPPVS(ph)PGTALVGSQKEPSEVPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 2 KQPPVS(0.99)PGT(0.01)ALVGSQKEPSEVPT(1)PK;KQPPVS(0.857)PGT(0.143)ALVGSQKEPS(0.006)EVPT(0.993)PK;KQPPVS(0.876)PGT(0.124)ALVGSQKEPS(0.012)EVPT(0.988)PK;KQPPVS(0.96)PGT(0.04)ALVGSQKEPS(0.448)EVPT(0.552)PK;KQPPVS(0.986)PGT(0.014)ALVGSQKEPS(0.006)EVPT(0.994)PK 148.95 3.2485000000000003e-06 13577000000.0 7570810.0 8667120.0 8836110.0 7022780.0 6962030.0 6519880.0 6616310.0 6338630.0 9472410.0 7354300.0 True False 7150842.077264427 8250738.545587658 9405699.788875867 7690222.899724193 7509902.152467937 6479187.010493311 7285151.18376297 6316642.77197737 7752459.124024103 7289146.623558826 0.9810259618255733 1.1319210562894875 1.2903705021485303 1.05502376298332 1.030285510816262 0.8888814212561329 0.9994518645319959 0.8665819331390202 1.063561967455536 1.0 22.79731849032001 -5.759654313159277 2.6144597816937805 0.9592927221935181 1.1360831894652277 0.38870311592116014 0.08941215831775942 0.2603831744751195 3.6471733771633135 0.029044143909978764 0.03667137160600837 1.7391846225834404e-06 5.759654313159277 0.17679046727170955 KQPPVS(ph)PGTALVGSQKEPSEVPTPK ddPTM_KYSE-520_SHP099_60min_R1 3 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.5)PGT(0.5)ALVGSQKEPSEVPTPK;KQPPVS(0.553)PGT(0.445)ALVGS(0.002)QKEPSEVPTPK;KQPPVS(1)PGTALVGSQKEPSEVPTPK 267.77 4.5744999999999996e-38 4399240000.0 1528700.0 1873610.0 1531900.0 1067300.0 1100660.0 1588230.0 1095680.0 1443190.0 1998590.0 1685840.0 True False 1443899.9636121013 1783598.9632540562 1630648.725126664 1168735.8711045552 1187275.6801012584 1578317.2674459934 1206442.0272063133 1438183.9107330777 1635696.4363539305 1670904.7691636742 0.8641425832633215 1.0674450131271023 0.9759076371197628 0.6994628854219705 0.7105585560663142 0.9445884029859924 0.7220291960804953 0.8607216504941341 0.9789285820116689 1.0 20.67219808071826 -5.1357959752388 11.854695475098291 0.8328034025030763 0.9797003425441918 0.19362722457254022 0.11341552540868537 0.7657119892177411 69.73004194489646 0.030499534566300807 0.052858093538957256 7.3148264189273695e-06 5.1357959752388 0.14689694004111553 KQPPVSPGT(ph)ALVGSQK ddPTM_KYSE-520_SHP099_60min_R1 1 KQPPVSPGTALVGSQK 16 1 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVS(0.446)PGT(0.554)ALVGSQK 312.05 5.377499999999999e-47 13831000000.0 3999000.0 3961200.0 3109700.0 2857400.0 2591600.0 3635500.0 3324000.0 4153600.0 3693800.0 3946600.0 True False 3777167.498191138 3770898.0061175823 3310156.2376959245 3128966.4368913635 2795544.1758130766 3612809.495979752 3660022.3591137826 4139192.1310575255 3023099.033120424 3911636.194408342 0.9656234144654285 0.9640206345130092 0.8462331549206368 0.7999124359684063 0.7146738696735879 0.9236057026837616 0.9356755529427201 1.0581741054995026 0.7728476992420523 1.0 21.899340766575015 -6.501955003285774 24.76274000893369 0.9441105623276302 0.8559918175923023 0.14914110794560798 0.09614387242345693 1362.216281858727 1612153.539961351 0.035632568982770736 0.031072643347036796 3.148074465307437e-07 6.501955003285774 -0.08811874473532799 KQPPVSPGTALVGS(ph)QKEPSEVPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 2 KQPPVS(0.001)PGT(0.007)ALVGS(0.99)QKEPS(0.014)EVPT(0.989)PK 84.516 0.025402 339080000.0 143130.0 129120.0 138870.0 122880.0 127290.0 133810.0 118900.0 122840.0 130440.0 117440.0 True False 135190.2935774188 122916.88138692874 147821.78239985596 134558.47825478096 137306.99881897162 132974.84215570067 130919.5723521748 122413.89671107165 106755.38412481127 116399.57296693741 1.1614328998940466 1.055990827576683 1.2699512432218616 1.1560049132912324 1.179617719542432 1.142399742252245 1.124742720399513 1.0516696375324552 0.9171458400035066 1.0 16.82872623990284 -7.387439275527147 2.0694255978599627 0.9594130027316478 1.1603864192504856 0.6895182004460154 0.053417594761100286 0.18990883824215665 1.4948420466574424 0.041222376234881106 0.015071445467739104 4.097894039007384e-08 7.387439275527147 0.20097341651883782 KQPPVSPGTALVGS(ph)QKEPSEVPTPK ddPTM_KYSE-520_SHP099_60min_R1 4 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVSPGTALVGS(0.983)QKEPS(0.017)EVPTPK;KQPPVSPGTALVGS(1)QKEPSEVPTPK;KQPPVSPGTALVGS(0.981)QKEPS(0.019)EVPTPK;KQPPVSPGTALVGS(1)QKEPSEVPTPK 150.62 4.3998999999999996e-07 35557900000.0 10801650.0 9660550.0 9273330.0 8360380.0 9016540.0 9335640.0 8857870.0 9580590.0 11540990.0 9913240.0 True False 10202460.941944577 9196442.677218817 9871103.689652598 9154948.001560094 9726090.400905102 9277372.807880182 9753309.944080373 9547357.169416526 9445437.140682364 9825416.405984012 1.0383744077992392 0.9359850307838221 1.0046499081342506 0.9317618331152275 0.9898909113899318 0.9442218451148744 0.9926612309418537 0.971700004856981 0.9613269046724342 1.0 23.228087120117095 -4.242259846155333 24.376484946946906 0.9697337115672509 1.03837449472244 0.3958063185461844 0.025245606678432765 2956.850577400338 3757970.275747791 0.0056186576404902485 0.1945706668743312 5.724534193822996e-05 4.242259846155333 0.06864078315518918 KQPPVSPGTALVGSQKEPSEVPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 KQPPVSPGTALVGSQKEPSEVPTPK 25 2 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 KQPPVSPGTALVGSQKEPS(0.003)EVPT(0.997)PK;KQPPVSPGTALVGSQKEPS(0.049)EVPT(0.95)PK;KQPPVSPGTALVGSQKEPSEVPT(1)PK;KQPPVSPGTALVGSQKEPS(0.18)EVPT(0.82)PK 261.26 8.5455e-38 24869600000.0 15108200.0 17158500.0 11818500.0 8582400.0 9048600.0 13238100.0 8513700.0 9184400.0 13364300.0 13894100.0 True False 14270118.02854998 16334179.904566417 12580339.420268606 9398068.715607343 9760673.34050864 13155476.107476134 9374347.881704874 9152541.460055074 10937680.006587064 13771009.083446233 1.036243454788198 1.1861280321281107 0.9135379509255499 0.6824531636468466 0.7087841770609017 0.9553022605503896 0.6807306439855254 0.66462387793042 0.7942540695681453 1.0 23.71513094237322 -4.9661769613487605 4.419995822658552 0.770411840308887 1.1068891201876583 0.5626298286649641 0.11415389363679736 0.1304436834561613 5.894091854206201 0.029901606592485214 0.06360085872841958 1.0809933907224628e-05 4.9661769613487605 0.3364772798787713 KQQEYEEQFK ddPTM_KYSE-520_SHP099_60min_R1 2 KQQEYEEQFK 10 1 Q6P4H7;H3BSF0;H3BQQ6;H3BTI2;H3BTP8;H3BSY6;H3BP64;H3BUL4;H3BMX9;Q9GZU8 Q6P4H7 NIP30;FAM192A Protein FAM192A 0 ; 124.12 0.0011181 438130000.0 665960.0 687640.0 498250.0 436260.0 672870.0 688300.0 531770.0 581600.0 586870.0 631830.0 False True 629017.871241653 654604.7422313178 530367.9922281866 477722.01923364855 725821.040893405 684004.0643880791 585526.5011750715 579582.5653464607 480309.2017887767 626232.4777563013 1.0044478585577856 1.0453062807867617 0.8469186940422141 0.7628509159174499 1.1590281032595353 1.092252619728004 0.9349986178821748 0.9255070376148801 0.7669822611399106 1.0 19.25633880610554 -7.273653294740664 3.0828903310447813 0.878547329223854 0.9801972920597524 0.09099543635838181 0.11995670462560726 0.6506889875439732 12.570459482218464 0.07770636957852663 0.0355542312286493 5.325332206653115e-08 7.273653294740664 0.10164996283589833 KQQHVISTEEGDMMETNS(ph)T(ph)DDEKSTAK ddPTM_KYSE-520_SHP099_60min_R1 4 KQQHVISTEEGDMMETNSTDDEKSTAK 27 2 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2;Q9H0E3 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 2 KQQHVISTEEGDMMET(0.004)NS(0.996)T(1)DDEKSTAK;KQQHVISTEEGDMMET(0.086)NS(0.946)T(0.968)DDEKSTAK;KQQHVISTEEGDMMET(0.025)NS(0.976)T(0.999)DDEKSTAK;KQQHVISTEEGDMMETNS(1)T(1)DDEKSTAK 271.58 1.4314999999999999e-40 3616090000.0 1994910.0 2021470.0 1905530.0 2033080.0 1848200.0 1699830.0 1640770.0 1753690.0 2300300.0 1654970.0 True False 1884248.3655455096 1924355.5469116692 2028363.5127557968 2226303.3119322103 1993642.8251804814 1689220.7304500754 1806635.043972059 1747606.8587043209 1882623.5058440927 1640308.2533471773 1.1487160182853153 1.173167020884563 1.2365745942061575 1.3572469122125457 1.2154074218137336 1.029819076385849 1.1013997157457929 1.0654136837623003 1.1477254363638372 1.0 20.645535526720167 -6.203078624677443 6.904015855060442 1.0751348105602074 1.2319121068322658 0.6060156505596699 0.06328956305162381 0.18995669514285804 19.019788434388705 0.022161974435586863 0.0220930340575969 6.265004327600375e-07 6.203078624677443 0.1567772962720584 KQQQEPTGEPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 14 KQQQEPTGEPSPK 13 1 P52926;F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2 P52926 HMGA2 High mobility group protein HMGI-C 1 KQQQEPT(0.101)GEPS(0.899)PK;KQQQEPTGEPS(1)PK;KQQQEPT(0.001)GEPS(0.999)PK;KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK;KQQQEPT(0.001)GEPS(0.999)PK;KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK;KQQQEPTGEPS(1)PK 249.97 3.2419e-16 131099980000.0 46934470.0 43886400.0 41986060.0 38898580.0 42288310.0 38459710.0 39324620.0 42128990.0 49543900.0 43864340.0 True False 44330921.38755362 41778031.46917062 44692548.60767117 42595489.34791543 45616159.40942968 38219668.68398498 43299936.360906474 41982854.366670184 40547976.66008311 43475736.07354007 1.01967040448877 0.9609505264845258 1.0279883135750212 0.9797531495697811 1.0492325956774842 0.8791034295390802 0.9959563717946897 0.9656617267078665 0.9326576228978711 1.0 25.373707117750445 -6.235482217316139 24.99758197977374 0.9551096930404015 1.004526490543997 0.31096718861961237 0.039200770637970624 976.2507788762246 940161.89281391 0.012240322916714279 0.012236728014252699 5.814572402521977e-07 6.235482217316139 0.04941679750359551 KQS(ph)AGPNS(ph)PTGGGGGGGSGGTR ddPTM_KYSE-520_SHP099_60min_R1 1 KQSAGPNSPTGGGGGGGSGGTR 22 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 2 KQS(1)AGPNS(0.981)PT(0.018)GGGGGGGS(0.001)GGT(0.001)R 48.672 0.04253 0.0 193290.0 167620.0 149710.0 175690.0 166350.0 168080.0 167500.0 165540.0 205080.0 182740.0 True False 182567.81838593798 159567.2835972505 159360.54614446952 192387.5247768756 179440.79859797252 167030.95037388962 184432.53464246631 164965.78037732662 167842.6416460924 181121.06576956878 1.0079877655877414 0.8809979276527664 0.8798564952528268 1.0622040233665617 0.9907229611063907 0.9222060927269204 1.0182831790373326 0.9108039403169385 0.9266875773557459 1.0 17.46659482698574 -5.196895057304244 24.999998669957087 0.972282402185577 0.9187525096930667 0.15791666211117494 0.055297110341495294 394.72584007687306 152888.04705089692 0.01520203494346513 0.026330693821065124 6.35484471441974e-06 5.196895057304244 -0.05352989249251039 KQS(ph)DSDLIPER ddPTM_KYSE-520_SHP099_60min_R1 2 KQSDSDLIPER 11 1 Q9P2M4;C9JP26 Q9P2M4 TBC1D14 TBC1 domain family member 14 1 KQS(0.985)DS(0.015)DLIPER;KQS(0.937)DS(0.063)DLIPER 81.632 0.0055613 504260000.0 367520.0 373670.0 302700.0 285900.0 360150.0 412840.0 370020.0 440620.0 532280.0 460350.0 True False 347132.93296704325 355718.3323098954 322212.52633712406 313071.85004103056 388491.75602680945 410263.3124247776 407425.2326471965 439091.5920614809 435631.36968686414 456271.65714688075 0.7608031915409901 0.7796196119965968 0.7061857147821894 0.6861523067172415 0.8514483640208843 0.8991645788173681 0.8929444252462961 0.9623468501356653 0.9547631610758321 1.0 18.79953351313463 -6.170670969000971 1.6092804396338225 0.9495327102374989 0.7347617892591252 0.8660547078105925 0.038523220576742956 0.14070561192428188 0.7267556620722035 0.01715304525551533 0.01669862971992798 6.750392585213659e-07 6.170670969000971 -0.2147709209783737 KQS(ph)EADLAETRPDLK ddPTM_KYSE-520_SHP099_60min_R1 1 KQSEADLAETRPDLK 15 2 Q6UX15-3;Q6UX15-2;Q6UX15 Q6UX15-3 LAYN Layilin 1 KQS(0.981)EADLAET(0.019)RPDLK 75.55 0.01114 608730000.0 264530.0 366490.0 210330.0 404150.0 359740.0 355220.0 382390.0 514840.0 550630.0 394000.0 True False 249855.99357251864 348883.2702872952 223888.20833989856 442560.29448787135 388049.4913593909 353002.9402178314 421045.7129667628 513054.1402045588 450649.4722527202 390509.46652736136 0.6398205805210929 0.8934054106031523 0.5733233827360025 1.1332895420522744 0.9937006004237336 0.9039548857981345 1.0781959185546706 1.3138071780101424 1.1540039637455117 1.0 18.574997996290726 -5.414787378312046 0.6289474753763724 1.1524170652841625 0.6366608477512508 0.5365541923993803 0.1473458426028229 0.9067273802296343 0.6496123449511979 0.09240640234258767 0.2829132035068827 3.847801164074769e-06 5.414787378312046 -0.5157562175329118 KQS(ph)EGLTK ddPTM_KYSE-520_SHP099_60min_R1 3 KQSEGLTK 8 1 A0A2R8Y5M6;P51572;P51572-2 A0A2R8Y5M6 BCAP31 B-cell receptor-associated protein 31 1 KQS(0.985)EGLT(0.015)K;KQS(0.996)EGLT(0.004)K;KQS(0.976)EGLT(0.024)K 113.67 0.0015555 277640000.0 1341850.0 1290960.0 1097160.0 1500210.0 1311450.0 1572350.0 1420310.0 1396360.0 1652470.0 1272740.0 True False 1267414.905588342 1228940.3438295345 1167884.6891180691 1642789.5073454173 1414653.6538702198 1562536.3804163823 1563888.7956898017 1391516.3530728759 1352423.1033787706 1261464.5137767373 1.0047170504969576 0.9742171344560239 0.9258165222749734 1.3022875312021418 1.1214375342472733 1.23866851849701 1.2397406178376174 1.1030959157993057 1.072105547646132 1.0 20.26666819179502 -5.242879852432154 24.992184447863607 1.1639562374424801 0.9688469088589006 0.49047456143509593 0.08628899132417067 657.4291195438879 885290.1429612617 0.02307657473283295 0.03988048551921051 5.716367581070884e-06 5.242879852432154 -0.19510932858357954 KQS(ph)FDDNDS(ph)EELEDKDSK ddPTM_KYSE-520_SHP099_60min_R1 6 KQSFDDNDSEELEDKDSK 18 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 2 KQS(1)FDDNDS(1)EELEDKDSK;KQS(1)FDDNDS(1)EELEDKDSK;KQS(1)FDDNDS(1)EELEDKDSK;KQS(1)FDDNDS(1)EELEDKDSK;KQS(1)FDDNDS(1)EELEDKDSK;KQS(1)FDDNDS(1)EELEDKDSK 149.73 2.7500999999999997e-06 5612780000.0 12984930.0 11532390.0 10519750.0 10536420.0 11161840.0 11078950.0 10595930.0 11694280.0 13133730.0 11520540.0 True False 12264630.048083795 10978356.673929704 11197869.91719511 11537798.188909817 12040213.305817803 11009802.163522173 11667070.010711337 11653715.27214546 10748975.706390364 11418476.978444505 1.0741038468822623 0.9614554283075012 0.980679817311376 1.0104498358835914 1.0544500224107816 0.9642093410799165 1.0217711199782702 1.0206015473118728 0.9413668501221303 1.0 23.444866897909126 KQS(ph)LGEDHVILEEQK ddPTM_KYSE-520_SHP099_60min_R1 3 KQSLGEDHVILEEQK 15 1 Q9HBD1 Q9HBD1 RC3H2 Roquin-2 1 KQS(1)LGEDHVILEEQK;KQS(1)LGEDHVILEEQK;KQS(1)LGEDHVILEEQK 209.85 3.0236e-14 2188140000.0 2742910.0 2446030.0 2489640.0 2480230.0 2505470.0 2642710.0 2594260.0 2594540.0 3281260.0 2897630.0 True False 2590755.314444473 2328519.0472341185 2650126.1779648433 2715950.313491657 2702636.2348257406 2626215.8666264964 2856513.1183376987 2585540.1463101874 2685465.897833322 2871959.2525220294 0.9020863761104495 0.8107771881475389 0.9227589756496782 0.9456785680739125 0.9410426810381809 0.914433540211362 0.9946217432678522 0.9002704840048406 0.9350640666210925 1.0 21.453603849612776 -4.9204018107514065 6.507715869764497 0.9428186633793285 0.8571082299935456 0.49742522760789054 0.03582039829707506 0.1589691437394481 10.411619015540598 0.008786232405229943 0.01858110375415187 1.2011526098304014e-05 4.9204018107514065 -0.08571043338578288 KQS(ph)LGELIGTLNAAK ddPTM_KYSE-520_SHP099_60min_R1 25 KQSLGELIGTLNAAK 15 1 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 1 KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(0.982)LGELIGT(0.018)LNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(1)LGELIGTLNAAK;KQS(0.993)LGELIGT(0.007)LNAAK 273.8 1.3703e-25 613726730000.0 54699005.0 54703317.0 51998208.0 40565664.0 43536017.0 53555687.0 42835176.0 46751864.0 62049727.0 48762762.0 True False 51664742.15288688 52075287.539967224 55350095.68775449 44421012.510048375 46962053.85184792 53221426.091959625 47165373.6211113 46589692.695751116 50783060.72312689 48330761.86553472 1.068982572561714 1.0774770669837666 1.1452353232450354 0.9191043301497294 0.9716803964834072 1.1011915400802423 0.9758872362147787 0.9639759626668499 1.0507399172480443 1.0 25.52643840118627 -5.2505869285931395 24.953006720151652 0.9983530519191738 1.095256193133497 0.4499753024913684 0.050502930729172626 697.3664698802232 1603449.4170603044 0.014070568712459666 0.024073687236145662 5.615818606089146e-06 5.2505869285931395 0.0969031412143232 KQS(ph)LGKPDQK ddPTM_KYSE-520_SHP099_60min_R1 1 KQSLGKPDQK 10 2 Q96QB1-4;Q96QB1-1;Q96QB1-6;Q96QB1 Q96QB1-4 DLC1 Rho GTPase-activating protein 7 1 KQS(1)LGKPDQK 53.001000000000005 0.050599 1265100000.0 776210.0 721030.0 619440.0 650970.0 553930.0 680240.0 671130.0 677810.0 701950.0 831240.0 True False 733152.0839637272 686390.6365119057 659370.0935390431 712837.9930787326 597521.139569431 675994.3698377844 738974.3699976023 675458.8353120438 574493.5747194984 823875.8602949339 0.8898817398306474 0.8331238595413989 0.8003269974471634 0.8652250022516116 0.7252562775119158 0.8205051299789141 0.8969486856103075 0.819855111509446 0.6973059928152758 1.0 19.652067446276053 -10.921090539482742 7.0366956429105905 1.0507216571112736 0.8178390427481592 0.4478546197017912 0.061110694161554256 0.037088188291495607 0.0004159064260194302 0.0451291755196582 0.014324674229993279 1.1992492637605075e-11 10.921090539482742 -0.23288261436311442 KQS(ph)LPATSIPTPASFK ddPTM_KYSE-520_SHP099_60min_R1 6 KQSLPATSIPTPASFK 16 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 KQS(0.997)LPAT(0.002)S(0.001)IPTPASFK;KQS(0.978)LPAT(0.016)S(0.005)IPTPASFK;KQS(1)LPATSIPTPASFK;KQS(0.999)LPAT(0.001)S(0.001)IPTPASFK;KQS(1)LPATSIPTPASFK;KQS(0.999)LPAT(0.001)S(0.001)IPTPASFK 153.19 3.2556000000000002e-06 8600310000.0 7740540.0 7369490.0 6429340.0 5357880.0 5763420.0 7727010.0 6096230.0 6485180.0 8124010.0 6501250.0 True False 7311156.815816063 7015448.638569994 6843785.543707724 5867091.304294643 6216968.36462595 7678782.8644011775 6712496.421871306 6462684.424232386 6648894.573626256 6443653.98289597 1.1346290218597697 1.0887376412811418 1.0620969968086216 0.9105224023307653 0.9648203303790467 1.1916814411176846 1.041722047721518 1.0029533617706552 1.0318515847180925 1.0 22.619447594317915 -4.732879956647796 2.8098682820832988 1.0246356484862482 1.1225013595732027 0.22034266934845304 0.06850917073052262 0.4492571417572891 7.007674872285399 0.019876323322174826 0.06329809691667487 1.8497798460295144e-05 4.732879956647796 0.09786571108695452 KQS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 KQSPPR 6 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KQS(1)PPR;KQS(1)PPR 67.98100000000001 0.033904000000000004 266720000.0 237950.0 294540.0 225190.0 158770.0 216720.0 284300.0 290410.0 114957.0 228290.0 515030.0 True False 224750.43915843478 280389.85628644645 239706.1077167396 173859.45306405894 233774.631031876 282525.5782442693 319767.4769284698 114558.2409981654 186838.2907225789 510467.23488727637 0.44028377102022065 0.5492808100570126 0.4695817700614469 0.34058885895477964 0.4579620689729462 0.5534646671429516 0.6264211590369404 0.22441840174808214 0.3660142668389625 1.0 18.961458836945063 -10.50116392885799 6.385563946499293 1.000358822070862 0.45016956051697027 0.6921391612108241 0.11051988961942763 0.0005977969139004941 4.669930474304143e-05 0.11330760493759955 0.027463976800504292 3.153813959601097e-11 10.50116392885799 -0.5501892615538917 KQS(ph)SEGIPVAQPSVMDDIEVWLR ddPTM_KYSE-520_SHP099_60min_R1 7 KQSSEGIPVAQPSVMDDIEVWLR 23 1 Q6ZVM7-2;Q6ZVM7;Q6ZVM7-4;Q6ZVM7-3 Q6ZVM7-2 TOM1L2 TOM1-like protein 2 1 KQS(0.5)S(0.5)EGIPVAQPSVMDDIEVWLR;KQS(0.5)S(0.5)EGIPVAQPSVMDDIEVWLR;KQS(0.778)S(0.222)EGIPVAQPSVMDDIEVWLR;KQS(0.801)S(0.199)EGIPVAQPSVMDDIEVWLR;KQS(0.786)S(0.214)EGIPVAQPSVMDDIEVWLR;KQS(0.771)S(0.229)EGIPVAQPSVMDDIEVWLR;KQS(0.844)S(0.156)EGIPVAQPSVMDDIEVWLR 168.59 1.1612000000000001e-10 2659664000.0 1373654.0 1348422.0 1176767.0 1082888.0 1197178.0 1219990.0 1150730.0 1354396.0 1797853.0 1170438.0 True False 1297454.674308641 1283641.7830973133 1252623.283713773 1185805.3499378504 1291389.0975889615 1212375.589877688 1267057.0184425404 1349697.9163944034 1471408.2153859604 1160068.829906985 1.11842904563919 1.1065220873146264 1.0797835881981321 1.0221853388069473 1.1132004104381512 1.045089359029582 1.0922257246961233 1.1634636511202727 1.2683800973291721 1.0 20.14577897607317 -7.224515053108635 5.181135921501886 1.1622437410601645 1.0802195330379516 0.1329684582972187 0.06744651258957028 0.28048396709511536 19.994806100603064 0.0320777072203342 0.017487571125927172 5.963276501253358e-08 7.224515053108635 -0.08202420802221289 KQS(ph)SSEISLAVER ddPTM_KYSE-520_SHP099_60min_R1 4 KQSSSEISLAVER 13 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 KQS(0.689)S(0.155)S(0.155)EISLAVER;KQS(0.333)S(0.333)S(0.333)EISLAVER;KQS(0.962)S(0.037)S(0.001)EISLAVER;KQS(0.881)S(0.115)S(0.004)EISLAVER 208.49 2.6973e-11 1974700000.0 1430970.0 1299120.0 1204130.0 1011250.0 991450.0 1125580.0 1121600.0 1313220.0 1348910.0 1394070.0 True False 1351591.2415320266 1236708.325181124 1281750.1464761195 1107358.8959566003 1069471.4744211605 1118554.837707298 1234982.2737611372 1308664.7463278514 1103981.9472539036 1381719.6243700488 0.9781950098220844 0.8950501269350951 0.9276485068817727 0.8014353103376276 0.7740148258433777 0.8095382145399199 0.8938009216769923 0.9471275671607369 0.7989912915633873 1.0 20.398033466115518 -9.92750356133128 16.87066317056613 0.9999999999999684 0.8684123764016923 0.2547022656036684 0.06692806129038163 0.0 0.0 0.06902362712755551 0.01674068854765647 1.1816706224888873e-10 9.92750356133128 -0.13158762359827603 KQS(ph)SVYK ddPTM_KYSE-520_SHP099_60min_R1 1 KQSSVYK 7 1 Q99558;A0A087WXF1 Q99558 MAP3K14 Mitogen-activated protein kinase kinase kinase 14 1 KQS(0.97)S(0.027)VY(0.003)K 55.676 0.06143200000000001 0.0 879360.0 789740.0 725520.0 706210.0 890130.0 902560.0 829160.0 821990.0 983350.0 945120.0 True False 830580.1478392993 751799.7049760923 772288.1800730437 773327.9860702209 960178.1668531005 896926.7882523681 912979.5846217751 819138.7085439079 804798.4282362248 936746.9720922324 0.8866643528979777 0.8025643288677424 0.824436270499099 0.8255462884955862 1.0250133658916818 0.9574909927374244 0.9746277402772141 0.8744503403244043 0.8591417450100752 1.0 19.837299883682334 -5.733436697880891 24.999567692114894 0.9439370883240648 0.8317595172510154 0.5348639373660478 0.051787876361483166 183.69628143731848 163995.14924028996 0.01613037285589826 0.02081964459574842 1.847410051033082e-06 5.733436697880891 -0.11217757107304938 KQS(ph)VFSAPSLSAGASAAEPLDR ddPTM_KYSE-520_SHP099_60min_R1 1 KQSVFSAPSLSAGASAAEPLDR 22 1 Q14573 Q14573 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 1 KQS(0.957)VFS(0.043)APSLSAGASAAEPLDR 121.49 6.9885e-05 873350000.0 263960.0 231730.0 181610.0 204060.0 165690.0 289850.0 200610.0 310920.0 288880.0 217470.0 True False 249317.61260878528 220597.34296617896 193316.8711862738 223453.8010471237 178728.86035285887 288040.9386356015 220889.61656492652 309841.49108927324 236426.67407218262 215543.38498909978 1.1566934082500073 1.0234475206805107 0.896881484885514 1.036699878580936 0.829201324651635 1.3363478477902162 1.024803505689108 1.4374901419727737 1.0968867083726042 1.0 17.71761876142613 -6.264671051422031 24.99817925219976 1.1968048866154295 0.9880999870385752 0.28722194515409794 0.14876380162564762 339.1210466436729 2623214.0592614426 0.04871145648721748 0.044740829086625716 5.436619625991171e-07 6.264671051422031 -0.20870489957685434 KQSAGPNS(ph)PTGGGGGGGSGGTR ddPTM_KYSE-520_SHP099_60min_R1 9 KQSAGPNSPTGGGGGGGSGGTR 22 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 KQSAGPNS(0.927)PT(0.073)GGGGGGGSGGTR;KQSAGPNS(0.961)PT(0.039)GGGGGGGSGGTR;KQSAGPNS(0.988)PT(0.012)GGGGGGGSGGTR;KQSAGPNS(0.954)PT(0.046)GGGGGGGSGGTR;KQSAGPNS(0.832)PT(0.168)GGGGGGGSGGTR;KQSAGPNS(0.97)PT(0.03)GGGGGGGSGGTR;KQSAGPNS(0.973)PT(0.027)GGGGGGGSGGTR;KQSAGPNS(0.944)PT(0.056)GGGGGGGSGGTR;KQSAGPNS(0.993)PT(0.007)GGGGGGGSGGTR 178.44 2.8965e-10 6373470000.0 3802820.0 3913540.0 3186440.0 2596437.0 2910010.0 3795860.0 2899581.0 3598270.0 4941860.0 3943170.0 True False 3591869.993866273 3725527.6640566965 3391843.020884259 2843201.591832752 3139011.231308005 3772168.629737224 3192698.944663506 3585788.4412125302 4044542.798152719 3908236.581539837 0.9190513212102128 0.9532502923834888 0.8678704449227278 0.7274896318360892 0.8031784068893907 0.9651843103753451 0.8169154753179219 0.9174952351015907 1.0348766544115344 1.0 21.89808637150342 -7.608446536019946 4.0315641330884375 1.0157973166146188 0.8644066235962022 0.4379092557075035 0.06830837291710523 0.22741161584218067 6.855123085216921 0.05662016319845913 0.019266179279461674 2.4635050902583828e-08 7.608446536019946 -0.15139069301841657 KQSFDDNDS(ph)EELEDKDSK ddPTM_KYSE-520_SHP099_60min_R1 18 KQSFDDNDSEELEDKDSK 18 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KQSFDDNDS(1)EELEDKDSK;KQSFDDNDS(0.999)EELEDKDSK;KQS(0.007)FDDNDS(0.993)EELEDKDSK;KQS(0.002)FDDNDS(0.998)EELEDKDSK;KQS(0.001)FDDNDS(0.999)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQS(0.031)FDDNDS(0.965)EELEDKDS(0.003)K;KQSFDDNDS(1)EELEDKDSK;KQS(0.005)FDDNDS(0.993)EELEDKDS(0.001)K;KQSFDDNDS(1)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK;KQS(0.002)FDDNDS(0.998)EELEDKDSK;KQSFDDNDS(1)EELEDKDSK 287.25 6.0597e-38 81522900000.0 21836960.0 19521980.0 19735640.0 18686640.0 19473700.0 18005560.0 18029530.0 20546010.0 23404860.0 18709720.0 True False 20625620.29789946 18584114.77771061 21007830.93254047 20462612.647256833 21006169.399803657 17893180.621216636 19852130.843656052 20474740.686784808 19155127.412507128 18543966.436741892 1.1122550490079137 1.0021650352477542 1.1328660998283961 1.10346471544046 1.1327765001873227 0.9649057919865607 1.0705439373704992 1.1041187308351355 1.032957403037266 1.0 24.14444652449568 -6.2251671932864285 24.998760465356934 1.0432649268947367 1.09383766095301 0.274499662910779 0.04943763271657748 1013.4540919332335 698471.5672921903 0.016607478141407186 0.016607036084006665 5.954328715766109e-07 6.2251671932864285 0.05057273405827334 KQSS(ph)DYEELIQVLK ddPTM_KYSE-520_SHP099_60min_R1 2 KQSSDYEELIQVLK 14 1 A0A0A0MRG9;Q96SN8-4;Q96SN8-3;Q96SN8-2;Q96SN8;F8WCI3 A0A0A0MRG9 CDK5RAP2 CDK5 regulatory subunit-associated protein 2 1 KQS(0.397)S(0.603)DYEELIQVLK;KQS(0.358)S(0.642)DYEELIQVLK 182.95 3.5373000000000003e-10 548950000.0 1042010.0 896130.0 869600.0 925220.0 946090.0 888120.0 928220.0 1010100.0 1055880.0 933760.0 True False 984207.6281045631 853078.5696814479 925655.8074091948 1013152.6306224626 1020541.9004842557 882576.9136486124 1022053.5361542094 1006596.1988591123 864158.8085687347 925487.6128542869 1.0634476511999749 0.9217611968359868 1.0001817361492167 1.0947230590129768 1.102707250005014 0.9536344964430868 1.1043405897158414 1.0876387591560295 0.9337335222711315 1.0 19.819854154977516 -5.019158261187641 24.159381719275263 1.0451368878383673 0.9846961912372449 0.08006761401802343 0.06638370617426602 926.8052548084951 1168746.1916725305 0.017502190142398906 0.03097971884168629 9.56845323892857e-06 5.019158261187641 -0.06044069660112239 KQSS(ph)EGIPVAQPSVMDDIEVWLR ddPTM_KYSE-520_SHP099_60min_R1 1 KQSSEGIPVAQPSVMDDIEVWLR 23 1 Q6ZVM7-2;Q6ZVM7;Q6ZVM7-4;Q6ZVM7-3 Q6ZVM7-2 TOM1L2 TOM1-like protein 2 1 KQS(0.422)S(0.578)EGIPVAQPSVMDDIEVWLR 102.03 0.00095465 810590000.0 408850.0 448170.0 365250.0 331630.0 306260.0 359430.0 346470.0 368030.0 574210.0 392360.0 True False 386170.2754777313 426639.24048311554 388794.5994206626 363148.01549180446 330360.91961896635 357186.6640462112 381494.5688213453 366753.3898288473 469947.9386561485 388883.995651461 0.9930217746061171 1.0970861368784455 0.9997701210854701 0.93382093259831 0.8495101966475724 0.9184915502831372 0.9809983776325459 0.9430920118336565 1.208452762034829 1.0 18.56898033695545 -9.441635501463193 7.005045640649572 1.000012081880774 0.9851617916986348 0.0 0.09483167180845402 0.0 0.0 0.09518086721693685 0.023084751121959995 3.617133172499207e-10 9.441635501463193 -0.014850290182139236 KQSS(ph)SEISLAVER ddPTM_KYSE-520_SHP099_60min_R1 3 KQSSSEISLAVER 13 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 KQS(0.235)S(0.53)S(0.235)EISLAVER;KQS(0.182)S(0.409)S(0.409)EISLAVER;KQS(0.113)S(0.519)S(0.368)EISLAVER 211.06 2.4058000000000004e-11 2783620000.0 1417450.0 1219330.0 1117580.0 931150.0 961740.0 1008690.0 1007440.0 1118600.0 1236650.0 1200660.0 True False 1338821.222883477 1160751.5565483575 1189620.994991223 1019646.2160395441 1037423.4664479344 1002394.3915554436 1109281.8668669034 1114719.8376832013 1012105.533409597 1190023.0864993457 1.1250380249528151 0.9754025528722343 0.9996621145314875 0.8568289368561798 0.871767512930939 0.8423318866057938 0.9321515518913533 0.9367211866135625 0.8504923516961983 1.0 20.182558131475073 -4.227579734847213 1.0980301753612582 0.8964161446961444 1.2391045739710884 0.6239337291872638 0.051977091539605474 1.1559311001044492 1.0984697742339657 0.016162984076529566 0.4690211930359859 5.9213436323503366e-05 4.227579734847213 0.34268842927494403 KQTDFEHR ddPTM_KYSE-520_SHP099_60min_R1 6 KQTDFEHR 8 1 Q01813-2;Q01813;B1APP6 Q01813-2 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 ;;;;; 175.51 0.00016224 10549640000.0 14903600.0 13207400.0 9958600.0 9218940.0 15049100.0 13413900.0 10518900.0 12167500.0 12079300.0 9522800.0 False True 14076867.598409962 12572896.679288426 10600547.290323375 10095105.285824621 16233378.552333908 13330178.874466421 11582253.066570982 12125293.782415848 9886003.614373159 9438435.400626302 1.4914407950999877 1.3320954316701825 1.1231254800578452 1.069574019138251 1.7199226209946532 1.4123293012718905 1.2271369750332162 1.2846720105337857 1.0474197464674238 1.0 23.170116294712436 -7.731103675358845 1.775544497667718 0.9899941543283909 1.340063473821308 0.33746230175405056 0.17491919627009583 0.4387842064632818 2.6526032717658983 0.17454959215394006 0.05213015869255499 1.857361010462499e-08 7.731103675358845 0.3500693194929171 KQVSS(ph)PCAQR ddPTM_KYSE-520_SHP099_60min_R1 1 KQVSSPCAQR 10 1 Q6NSI8-3;Q6NSI8-2;Q6NSI8 Q6NSI8-3 KIAA1841 Uncharacterized protein KIAA1841 1 KQVS(0.021)S(0.979)PCAQR 97.69 0.0016288000000000001 522370000.0 500860.0 414260.0 405050.0 490790.0 479250.0 438390.0 447530.0 438180.0 548510.0 444030.0 True False 473076.29736034386 394358.32778306276 431160.1711029147 537434.5340386058 516964.2484405066 435653.84539748676 492770.6998718985 436660.0558519812 448914.4108118692 440096.2396501122 1.0749382856269156 0.8960729319036848 0.9796951945004077 1.2211750195045519 1.1746618168142187 0.9899058572821315 1.119688503277519 0.9921921991406633 1.0200369154909563 1.0 18.747459519286036 -5.04831356933089 24.99963162122743 1.0780884642766149 0.9735998050801362 0.18803654728727537 0.08510744548510857 559.5486778349662 289535.18114589766 0.023772049969063715 0.04117566437749158 8.947185275481236e-06 5.04831356933089 -0.10448865919647865 KQWLQEVK ddPTM_KYSE-520_SHP099_60min_R1 1 KQWLQEVK 8 1 P00505;P00505-2 P00505 GOT2 Aspartate aminotransferase, mitochondrial 0 98.249 0.0073768 614250000.0 846100.0 511250.0 393000.0 468340.0 567050.0 682060.0 527410.0 590240.0 508830.0 682910.0 False True 799165.1463414653 486688.7825981055 418333.4088222326 512850.8927884444 611673.6089268432 677803.0105426896 580725.7498255711 588192.595203051 416439.298560471 676859.9486959411 1.1806949840674736 0.7190391210704294 0.6180501736411003 0.7576912975520541 0.9036930167094568 1.0013932894811777 0.8579703245027497 0.8690019203179042 0.6152517952388755 1.0 19.368497826370106 -4.252140992218004 24.604391696800537 0.8135647763296371 1.180695226912504 0.4094030247607906 0.13145981550955876 1088.5747583735263 2880395.4037448764 0.034526296405019606 0.4198069165867021 5.595759075992365e-05 4.252140992218004 0.36713045058286686 KQYQDS(ph)PNQK ddPTM_KYSE-520_SHP099_60min_R1 6 KQYQDSPNQK 10 1 H0Y9T5;Q8IU60 H0Y9T5 DCP2 m7GpppN-mRNA hydrolase 1 KQYQDS(1)PNQK;KQYQDS(1)PNQK;KQYQDS(1)PNQK;KQYQDS(1)PNQK;KQYQDS(1)PNQK;KQYQDS(1)PNQK 155.66 7.0506e-05 4527360000.0 7132970.0 6072050.0 6078750.0 5908180.0 5826050.0 5613910.0 5183090.0 5072470.0 6032210.0 5491150.0 True False 6737289.934876836 5780339.603667141 6470595.951343878 6469691.650840905 6284526.989309997 5578871.505315825 5707047.319283709 5054874.785493397 4936912.723639444 5442502.683050053 1.2379029147489857 1.0620738179274096 1.1889008289321903 1.1887346736621545 1.1547127039334892 1.0250562710222404 1.0486071668935588 0.9287776377650908 0.9071034064925313 1.0 22.37583878295898 -6.613710987609835 1.302270065620768 0.9432286237024682 1.1665450383524616 0.760596914517343 0.05300307961830112 0.21119000590797152 0.7297884431587528 0.03034985595819996 0.020104132012432198 2.4338231202275916e-07 6.613710987609835 0.2233164146499934 KRAAMSVT(ph)LT(ph)S(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 1 KRAAMSVTLTSVK 13 2 O94875-11;C9J372;C9J4Z9;C9JN77;C9JG84;C9JWC3;C9JZ60;C9J9D3 O94875-11 SORBS2 Sorbin and SH3 domain-containing protein 2 3 KRAAMS(0.027)VT(0.991)LT(0.991)S(0.991)VK 41.218 0.066804 1068100000.0 639890.0 673670.0 616100.0 448440.0 524090.0 463250.0 344960.0 428410.0 902470.0 410490.0 True False 604394.0261109099 641305.8820007147 655814.7917948547 491059.60277159815 565332.9013358072 460358.6849161376 379831.92328516586 426923.94570164575 738604.1974173452 406853.3779563874 1.4855327714046849 1.576257975838803 1.6119192498511212 1.2069694621639278 1.389524904955829 1.1315100472521717 0.9335842931747316 1.0493312058660351 1.8154063292465026 1.0 18.634149443359693 -5.266351823452308 24.20932453398282 1.2117886979290087 1.559738805376137 0.30214771939163065 0.23655001654960095 323.2504217642039 1593033.8827234772 0.0668236470239968 0.10281628320554305 5.415619914184319e-06 5.266351823452308 0.3479501074471283 KRAEFTVETR ddPTM_KYSE-520_SHP099_60min_R1 2 KRAEFTVETR 10 2 Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98 Q60FE5 FLNA Filamin-A 0 ; 187.31 2.5078e-06 1702980000.0 2231700.0 2156500.0 1912770.0 1656300.0 2143900.0 1726240.0 1730090.0 1801170.0 2287800.0 1540080.0 False True 2107903.1522163446 2052898.5030275085 2036070.2147402111 1813714.2540152464 2312612.7328776256 1715465.8958437862 1904984.3812512509 1794922.1616662403 1872393.1907447346 1526436.089364111 1.380931155194623 1.344896466567895 1.3338719052354204 1.1882018950238598 1.5150406551518467 1.1238373540803939 1.2479948518806556 1.175890804844621 1.226643685766591 1.0 20.541735755666984 -13.567367166039936 0.06960865966465327 4.845204990972234e-12 1.6658848450854402 0.5362990913750354 0.09424977636802682 217.16574890269504 1.1765084947977007 35.64540423718566 5.141216205201144 2.707901320020022e-14 13.567367166039936 1.665884845080595 KRAPS(ph)PLPK ddPTM_KYSE-520_SHP099_60min_R1 1 KRAPSPLPK 9 2 Q9BSL1 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 1 KRAPS(1)PLPK 103.88 0.0014215 2490600000.0 8869300.0 7707000.0 6497000.0 6969000.0 6493600.0 6838800.0 5676100.0 6473900.0 7477700.0 4978000.0 True False 8377302.248488789 7336744.151557162 6915807.015567543 7631331.664693748 7004609.376470056 6796116.512475944 6249895.581397635 6451443.551919623 6119938.17747701 4933898.792825401 1.697907192719598 1.4870074275187495 1.4016921112415444 1.5467142690058424 1.4196905268214595 1.3774333033256532 1.266725533666374 1.307575169823295 1.2403858357160225 1.0 22.234296691815388 -1.0000000001380598 0.05392182841904451 0.28135958524233456 3.5129041493343287 0.8867398051455022 0.06058020442555443 134.11150125343698 0.5449861544740288 7.25536010670503 35.15992449728317 0.09999999996821056 1.0000000001380598 3.231544564091994 KRCS(ph)DNTEVEVSNLENK ddPTM_KYSE-520_SHP099_60min_R1 2 KRCSDNTEVEVSNLENK 17 2 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 KRCS(0.969)DNT(0.031)EVEVSNLENK;KRCS(0.984)DNT(0.016)EVEVS(0.001)NLENK 150.91 3.7842e-06 480840000.0 360740.0 384120.0 302620.0 339680.0 339800.0 361970.0 330970.0 334630.0 418790.0 370550.0 True False 340729.0330826385 365666.2986241256 322127.36940911954 371963.0850714844 366540.32680247154 359710.8109640463 364427.6775559233 333469.2466332293 342748.2928367812 367267.2152835375 0.9277414887674877 0.995641003082249 0.8770926344744135 1.0127859759666311 0.9980208184917764 0.9794253230208486 0.9922684693611379 0.9079744468228249 0.9332395557609812 1.0 18.486470591691035 -4.207656220655893 20.78001339595661 0.9642785008510733 0.927739778942131 0.06567768771059879 0.04301041071899402 17885.9071257692 6908785.010710164 0.010804239225032661 7.357509108391467 6.199316071043465e-05 4.207656220655893 -0.03653872190894225 KRDAEDDGEEEDD ddPTM_KYSE-520_SHP099_60min_R1 11 KRDAEDDGEEEDD 13 2 Q5TB19;Q9BTT0-3;Q9BTT0;H0YCE2;Q5TB25;Q9BTT0-2 Q5TB19 ANP32E Acidic leucine-rich nuclear phosphoprotein 32 family member E 0 ;;;;;;;;;; 198.74 1.3726e-07 7128730000.0 6228370.0 7479730.0 9261080.0 3920930.0 6013660.0 6944630.0 5356840.0 6060490.0 9810850.0 7421160.0 False True 5882869.900152227 7120392.543496384 9858064.035051916 4293574.008329411 6486900.828955116 6901285.988190297 5898361.664920302 6039467.574718996 8029446.951402224 7355414.295975111 0.7998012978509366 0.968047788605554 1.3402459247531788 0.5837297309926999 0.881921883381165 0.9382593162653919 0.8019074694606788 0.821091420781532 1.091637619351495 1.0 22.810375173335284 -5.267509286574378 24.99992368140215 0.8666176176617671 1.029233278719031 0.1483445437060943 0.17697141907566213 938.663255396702 3866040.5367089254 0.049346327178896476 0.07542343521109306 5.401205651741186e-06 5.267509286574378 0.16261566105726388 KRDDNKDIDSEK ddPTM_KYSE-520_SHP099_60min_R1 1 KRDDNKDIDSEK 12 3 G3V220;O14776-2;O14776 G3V220 TCERG1 Transcription elongation regulator 1 0 206.18 3.8035e-09 2246900000.0 1947200.0 1885900.0 1407700.0 1176800.0 1692800.0 2022600.0 1347100.0 2033000.0 1961800.0 1155500.0 False True 1839184.9343530342 1795298.5332063884 1498442.5943996361 1288642.7181821798 1826013.729285531 2009976.2031546223 1483278.0144290526 2025947.9975057684 1605586.5729535029 1145263.1689653958 1.6059059473767163 1.5675860202753393 1.3083827673889963 1.1251935390066807 1.5944053548278423 1.7550343515983216 1.295141636108853 1.7689803116046794 1.401936791876362 1.0 20.12724772130198 -8.026714334508275 23.574559919467646 0.9999999871745161 1.496204701235585 0.3720028144087675 0.19532666574122415 1496.8171674944927 1320893.530936481 0.19488939497706487 0.05032022542522254 9.403416348585486e-09 8.026714334508275 0.4962047140610689 KRDEDRHDINK ddPTM_KYSE-520_SHP099_60min_R1 7 KRDEDRHDINK 11 3 O75643;A0A494C1A5;O75643-2 O75643 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase 0 ;;;;;; 210.95 6.827799999999999e-10 79020090000.0 14989710.0 14175620.0 8573980.0 7725640.0 5448840.0 12773170.0 6278720.0 11156180.0 13837430.0 5178950.0 False True 14158200.905053925 13494601.937160594 9126672.469653038 8459882.502801629 5877632.708341307 12693447.90806315 6913434.29200207 11117481.815451976 11324901.525223758 5133068.53216213 2.758233367885752 2.6289541728515466 1.7780149266405254 1.648114076364804 1.1450524518646072 2.472877154966888 1.3468423904112619 2.1658549356575834 2.2062634570852944 1.0 22.29139009158129 -4.745823708174596 4.8899315191263275 1.748868827590631 2.721131904026658 0.4303105170882028 0.44797207727740973 0.16470768524449575 10.226100232050003 0.11296412622725764 0.29077002377242334 1.795462305427511e-05 4.745823708174596 0.9722630764360272 KRDFTNEAPPAPLPDASASPLS(ph)PHR ddPTM_KYSE-520_SHP099_60min_R1 3 KRDFTNEAPPAPLPDASASPLSPHR 25 2 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 KRDFTNEAPPAPLPDASASPLS(1)PHR;KRDFTNEAPPAPLPDASASPLS(1)PHR;KRDFTNEAPPAPLPDASASPLS(1)PHR 213.48 2.3719e-21 3782900000.0 3049300.0 3282690.0 3389180.0 3052880.0 2785310.0 2617910.0 2258360.0 2260810.0 3773670.0 2396120.0 True False 2880149.250371154 3124984.644981857 3607651.965679734 3343024.7973181573 3004498.0507539487 2601570.6526255934 2486657.068269616 2252967.7777870195 3088466.6544792755 2374892.2409531507 1.2127494463560253 1.315842711131879 1.519080278030561 1.4076532567121662 1.265109211670214 1.0954478724396635 1.0470610099225424 0.948661054567597 1.300466017455906 1.0 21.17943062299114 -6.1411924778964195 2.750500765311788 1.069884576613767 1.3700339387180243 0.5939558981109152 0.11202747916983682 0.19637229601530765 2.880883090049468 0.04094667516150577 0.04096988891940284 7.224495453589841e-07 6.1411924778964195 0.30014936210425724 KRDFTNEAPPAPLPDASASPLS(ph)PHRR ddPTM_KYSE-520_SHP099_60min_R1 1 KRDFTNEAPPAPLPDASASPLSPHRR 26 3 A0A494BZV2;Q6WCQ1-2;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 KRDFTNEAPPAPLPDAS(0.153)AS(0.153)PLS(0.693)PHRR 105.49 0.0009408999999999999 1174900000.0 1082700.0 1319900.0 1306300.0 1055100.0 895210.0 748340.0 692710.0 570240.0 1509900.0 622420.0 True False 1022640.4726910604 1256490.0227897102 1390506.188153898 1155376.3867726177 965657.9339518555 743669.3324773714 762735.8869981072 568261.9705350172 1235740.2214815442 616905.843035433 1.6576929595272505 2.0367614231164635 2.2540006774972823 1.8728569356511295 1.5653246680245683 1.2054827181052614 1.2363894678726495 0.921148627380367 2.00312614223459 1.0 19.234690785283497 -5.895004727852203 2.464131320276182 1.2682909323358342 1.9952509770101114 0.5266897996107216 0.30477808560699843 0.2205960233074175 2.72509005588856 0.10142876926788155 0.11822384814726185 1.273489217378451e-06 5.895004727852203 0.7269600446742772 KRDS(ph)DAGSS(ph)TPTTSTR ddPTM_KYSE-520_SHP099_60min_R1 2 KRDSDAGSSTPTTSTR 16 2 P51532-5;A0A2R8YF58;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4P4;A0A2R8Y7F3;Q9HBD4;A0A2R8YF80;A0A2R8Y6N0;A0A2R8Y526;A0A2R8Y7Y7;A0A2R8Y7S2;A0A2R8YGG3;A0A0A0MT49;A0A2R8YDA1;A0A2R8Y6V2;A0A2R8Y4C5;P51532-2;P51532-3;P51532-4;P51532;K7EP28;A0A2R8Y5K3;K7EQF0;A0A2R8Y523;A0A2R8YFK5 P51532-5 SMARCA4 Transcription activator BRG1 2 KRDS(0.991)DAGS(0.107)S(0.531)T(0.369)PT(0.002)TSTR;KRDS(0.979)DAGS(0.271)S(0.391)T(0.33)PT(0.011)T(0.01)S(0.004)T(0.004)R 75.646 0.0081102 1212290000.0 775470.0 716030.0 744040.0 690560.0 670000.0 728930.0 612950.0 710270.0 837140.0 673550.0 True False 732453.1332388812 681630.8440170591 792002.008906092 756190.6147755656 722725.1882214699 724380.4774871459 674912.9678155206 707806.2391482639 685136.4785820656 667582.8710139699 1.0971718494310407 1.0210430399176542 1.18637257379469 1.1327292050303992 1.0825999581501338 1.0850794844195268 1.0109800552408081 1.060252247145287 1.0262942749586041 1.0 19.34858741263009 -6.55851971263728 2.4138035257141475 1.029020853017289 1.1058928460955013 0.4435980805311621 0.04178949558921914 0.31423165331603997 3.7021298207618396 0.01875290508120532 0.014275371861287517 2.7636324749770035e-07 6.55851971263728 0.07687199307821224 KRDS(ph)DAGSST(ph)PTTSTR ddPTM_KYSE-520_SHP099_60min_R1 1 KRDSDAGSSTPTTSTR 16 2 P51532-5;A0A2R8YF58;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4P4;A0A2R8Y7F3;Q9HBD4;A0A2R8YF80;A0A2R8Y6N0;A0A2R8Y526;A0A2R8Y7Y7;A0A2R8Y7S2;A0A2R8YGG3;A0A0A0MT49;A0A2R8YDA1;A0A2R8Y6V2;A0A2R8Y4C5;P51532-2;P51532-3;P51532-4;P51532;K7EP28;A0A2R8Y5K3;K7EQF0;A0A2R8Y523;A0A2R8YFK5 P51532-5 SMARCA4 Transcription activator BRG1 2 KRDS(0.999)DAGS(0.001)S(0.026)T(0.972)PT(0.002)TSTR 119.69 0.00040752 2114300000.0 1724500.0 1478500.0 1427100.0 1374400.0 1379700.0 1325500.0 1340000.0 1495300.0 1779900.0 1404400.0 True False 1628838.5472944789 1407470.640726256 1519093.1494407346 1505022.562771574 1488274.54058084 1317227.0628307387 1475460.2771397305 1490113.1533056425 1456715.0276276593 1391958.1086066654 1.1701778503412923 1.0111443958145538 1.0913353929604461 1.08122690867334 1.069194921440981 0.9463122881975725 1.0599889953704498 1.0705158036668425 1.0465221752153266 1.0 20.408684362827742 -4.251587759102609 24.674006658077214 1.0452280300285977 1.1701779319200791 0.4520985753526704 0.042245528753457814 1133.7739400540356 2839540.583255943 0.010739288311329892 0.13828986539758006 5.602891867185751e-05 4.251587759102609 0.12494990189148147 KRDS(ph)DAGSSTPTTSTR ddPTM_KYSE-520_SHP099_60min_R1 6 KRDSDAGSSTPTTSTR 16 2 P51532-5;A0A2R8YF58;A0A2R8YG32;A0A2R8Y440;A0A2R8Y4P4;A0A2R8Y7F3;Q9HBD4;A0A2R8YF80;A0A2R8Y6N0;A0A2R8Y526;A0A2R8Y7Y7;A0A2R8Y7S2;A0A2R8YGG3;A0A0A0MT49;A0A2R8YDA1;A0A2R8Y6V2;A0A2R8Y4C5;P51532-2;P51532-3;P51532-4;P51532;K7EP28;A0A2R8Y5K3;K7EQF0;A0A2R8Y523;A0A2R8YFK5 P51532-5 SMARCA4 Transcription activator BRG1 1 KRDS(1)DAGSSTPTTSTR;KRDS(0.999)DAGS(0.001)STPTTSTR;KRDS(1)DAGSSTPTTSTR;KRDS(0.999)DAGS(0.001)STPTTSTR;KRDS(1)DAGSSTPTTSTR;KRDS(0.998)DAGS(0.001)STPTTSTR 195.56 1.6140000000000002e-12 10149760000.0 1065759.0 957503.0 1043827.0 969175.0 968101.0 978660.0 973313.0 1080472.0 1238813.0 991319.0 True False 1006639.2237321046 911503.1186386971 1111113.7586022525 1061285.1006069118 1044285.040958797 972551.8199245061 1071704.97665948 1076724.09481606 1013875.7871343914 982536.6848945128 1.024530930201532 0.9277039042430848 1.1308623644129319 1.0801480666554997 1.062845852998266 0.9898376670067249 1.090753142489067 1.095861468960479 1.0318961141315994 1.0 19.906151748604337 -4.753565980286628 24.999954493596587 1.0630735812345364 0.9761174303080365 0.3415085163136877 0.046615106969975915 184.56062732705854 586011.6369725893 0.01168657093392966 0.029710251465787735 1.7637377878614854e-05 4.753565980286628 -0.08695615092649989 KRDS(ph)EEEFGS(ph)ERDEYR ddPTM_KYSE-520_SHP099_60min_R1 4 KRDSEEEFGSERDEYR 16 3 Q12873-3;Q12873-2;Q12873;A0A5F9ZHX5 Q12873-3 CHD3 Chromodomain-helicase-DNA-binding protein 3 2 KRDS(1)EEEFGS(1)ERDEYR;KRDS(1)EEEFGS(1)ERDEYR;KRDS(0.999)EEEFGS(1)ERDEY(0.001)R;KRDS(1)EEEFGS(1)ERDEYR 107.88 0.00060499 3345500000.0 2313730.0 2037070.0 1926480.0 2223120.0 1990560.0 2066760.0 2062120.0 2353010.0 2543580.0 1815390.0 True False 2185382.784593593 1939206.0994955932 2050663.9832769858 2434404.656394599 2147205.7472628797 2053860.5842143057 2270579.2139517767 2344847.957506661 2081729.9904338203 1799307.0569520495 1.2145691176777462 1.0777516222164587 1.1396965155856857 1.352967881156637 1.193351484376522 1.1414730889198308 1.2619186954104669 1.3031949985672455 1.156962055137039 1.0 20.779009977003685 -5.056839228326618 24.999786295835708 1.216238751768611 1.136799768988022 0.05259699851007471 0.09708981001505737 562.1811498613331 247264.99071331366 0.025174484133422857 0.04360371640320799 8.77325538579663e-06 5.056839228326618 -0.07943898278058903 KRDS(ph)EEEFGSERDEYR ddPTM_KYSE-520_SHP099_60min_R1 2 KRDSEEEFGSERDEYR 16 3 Q12873-3;Q12873-2;Q12873;A0A5F9ZHX5 Q12873-3 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 KRDS(0.998)EEEFGS(0.002)ERDEYR;KRDS(0.982)EEEFGS(0.018)ERDEYR 189.84 4.9157e-12 851300000.0 774010.0 735930.0 709760.0 712830.0 693680.0 732960.0 641610.0 698480.0 893080.0 519500.0 True False 731074.1223493186 700574.8181465496 755512.2652561517 780577.1488798453 748268.6695007016 728385.3247622926 706470.2003101668 696057.135906458 730919.1847147087 514897.63416488474 1.4198436229660516 1.3606098992527238 1.4673057616229312 1.5159851144895384 1.4532377308633833 1.4146216188071337 1.372059519084788 1.351835956743901 1.419542713378729 1.0 18.973926115738564 -10.655632737911029 0.3718837156630851 0.6716199277245906 1.441875128251812 0.886951321726942 0.045284408885302004 9.792447908675948 0.6862105666412192 2.9604680457317922 0.03644229614448468 2.2098727268291355e-11 10.655632737911029 0.7702552005272215 KRDS(ph)KTDSTESSGTQS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 KRDSKTDSTESSGTQSPK 18 3 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 2 KRDS(0.586)KT(0.376)DS(0.017)T(0.019)ES(0.017)S(0.008)GT(0.014)QS(0.962)PK 71.955 0.031382 1003300000.0 517810.0 528960.0 526510.0 530880.0 448510.0 455750.0 430710.0 528760.0 571250.0 518480.0 True False 489086.0470713563 503547.9676148535 560449.6770457858 581334.6755851079 483805.18532718177 452905.49519812176 474250.37012451806 526925.8549735119 467525.4000406207 513886.67057133606 0.9517391189142802 0.979881356048819 1.0906094848163337 1.1312507384921728 0.9414628030520623 0.8813334167523439 0.9228695688822779 1.0253736575569843 0.9097830841201404 1.0 18.971090705778106 -5.832224860985104 24.99999225099998 0.9436016364804289 1.0379249188396202 0.3478722265469434 0.06132316307206487 55.150196283984414 19476.73755800512 0.020394609067940758 0.023125320316284347 1.4715503929385174e-06 5.832224860985104 0.0943232823591913 KRDS(ph)QGTYSSR ddPTM_KYSE-520_SHP099_60min_R1 10 KRDSQGTYSSR 11 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 KRDS(0.941)QGT(0.026)Y(0.001)S(0.026)S(0.006)R;KRDS(0.827)QGT(0.047)Y(0.001)S(0.062)S(0.062)R;KRDS(1)QGTYSSR;KRDS(1)QGTYSSR;KRDS(0.985)QGT(0.006)YS(0.004)S(0.004)R;KRDS(0.989)QGT(0.01)YS(0.001)SR;KRDS(1)QGTYSSR;KRDS(0.894)QGT(0.009)YS(0.094)S(0.003)R;KRDS(0.967)QGT(0.01)YS(0.022)S(0.001)R;KRDS(1)QGTYSSR 188.92 5.4642e-07 258079800000.0 12290310.0 11036826.0 10090672.0 10344966.0 10910506.0 12359575.0 10935035.0 10753254.0 12360278.0 10259586.0 True False 11608542.004174441 10506600.312346429 10741132.86276606 11328148.458312567 11769100.749912672 12282434.30787345 12040455.053457204 10715953.47170234 10115963.09245212 10168694.049877118 1.1415961525870397 1.0332300549915152 1.056294231105897 1.114021958252295 1.1573856674402445 1.2078674260065752 1.1840709332387382 1.0538180634741228 0.9948143825385685 1.0 23.27763107214382 -10.386320345642915 6.415860981435847 0.9999876445146637 1.1069407336298345 0.18510283577088427 0.06582079241011277 1.2861845972046044e-05 1.2302814622985831e-06 0.07046500325670717 0.0170882997587372 4.108465593951482e-11 10.386320345642915 0.10695308911517076 KRDS(ph)SLR ddPTM_KYSE-520_SHP099_60min_R1 4 KRDSSLR 7 2 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 KRDS(0.641)S(0.359)LR;KRDS(0.5)S(0.5)LR;KRDS(0.633)S(0.367)LR;KRDS(0.793)S(0.207)LR 85.807 0.0063872 1677630000.0 914550.0 1405990.0 682500.0 889430.0 1308350.0 2127020.0 859150.0 888740.0 845240.0 5135600.0 True False 863818.088389773 1338444.1299659847 726495.0420386099 973961.1597831207 1411309.7015068056 2113744.4792019906 946001.2664959701 885657.1683734761 691765.7227664479 5090102.579436339 0.1697054381339068 0.26295032547540514 0.14272699433869945 0.1913441123402613 0.277265473432382 0.4152655955778517 0.18585112023434447 0.17399593712540676 0.13590408286880767 1.0 22.2792633001542 -10.933374001831085 2.6984971348540903 1.5149159999341484 0.2210125518513714 0.8974663432810625 0.07936562250904251 48533685.47011703 26344034.04238956 157361654.75434268 0.02186510275077132 1.1658052269462914e-11 10.933374001831085 -1.293903448082777 KRDS(ph)STQPPK ddPTM_KYSE-520_SHP099_60min_R1 3 KRDSSTQPPK 10 2 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 KRDS(0.495)S(0.495)T(0.009)QPPK;KRDS(0.467)S(0.467)T(0.066)QPPK;KRDS(0.499)S(0.499)T(0.001)QPPK 138.42 0.00019602 744720000.0 650930.0 607530.0 423382.0 436676.0 631520.0 696400.0 448260.0 489010.0 591870.0 820170.0 True False 614821.6153032159 578343.3468788792 450673.8811551518 478177.5557485734 681217.0311427207 692053.5092835363 493574.4953960121 487313.7384457919 484401.3278285191 812903.9318826044 0.7563275206202416 0.7114534992339056 0.5543999278136545 0.5882337838385919 0.838004350114398 0.8513349267247478 0.6071744471120257 0.599472728981913 0.595890004747171 1.0 19.632725340653653 -5.7346663086817005 24.994799118510233 0.7266807093205856 0.6497927333886803 0.09729400477458594 0.13350877935556527 700.5604059901216 654025.9039162337 0.04119693258667986 0.05316991152711205 1.842186907027474e-06 5.7346663086817005 -0.07688797593190533 KRDSKTDST(ph)ESSGTQSPK ddPTM_KYSE-520_SHP099_60min_R1 1 KRDSKTDSTESSGTQSPK 18 3 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 KRDS(0.315)KT(0.195)DS(0.11)T(0.38)ESSGTQSPK 109.32 7.819600000000001e-05 566160000.0 222360.0 228680.0 252110.0 264400.0 250370.0 237830.0 264720.0 264350.0 308510.0 231410.0 True False 210025.24753632944 217693.8695443218 268361.4139902625 289528.49650524126 270072.6945895667 236345.61475144114 291480.4810182313 263433.03154975397 252492.36090421316 229359.88743425542 0.9157017379358972 0.9491366253252211 1.1700451068070332 1.2623327459045461 1.177506222255107 1.0304574936591218 1.2708433208565397 1.148557555101109 1.1008566656041305 1.0 17.80725357607905 -4.7360667902118045 6.299803388749592 1.1563314429897649 0.9285418234995474 0.509339219511769 0.08297221787724521 0.12152009491084789 15.573994009263837 0.020935093505792306 0.05376306050979832 1.8362559235655263e-05 4.7360667902118045 -0.22778961949021748 KRDSQGTYS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 KRDSQGTYSSR 11 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 KRDS(0.31)QGT(0.125)YS(0.554)S(0.011)R 98.94200000000001 0.0013355 58885000000.0 960100.0 881860.0 791160.0 787540.0 811450.0 922010.0 914400.0 974220.0 1005200.0 805740.0 True False 906841.3390880992 839494.1219011534 842159.4395007566 862387.564817465 875306.4984810625 916255.3935877557 1006836.4756840079 970840.6582046583 822681.019029902 798601.7704562334 1.1355363494499011 1.0512049346216181 1.0545424148254006 1.0798718419128865 1.0960487828382954 1.1473245207862586 1.2607491154306008 1.2156755646184287 1.030151759568367 1.0 19.607116744786932 -6.175497644569819 3.5879718252269956 1.152523990614763 1.0776712896092233 0.054893149279916176 0.07652672557274388 0.4553035813861901 11.14738310682917 0.026570095304958206 0.026269558347439013 6.675785216189531e-07 6.175497644569819 -0.07485270100553976 KRDSS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 KRDSSLR 7 2 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 KRDS(0.409)S(0.591)LR 51.092 0.056659 411280000.0 132890.0 155060.0 108640.0 89027.0 149820.0 230810.0 147520.0 91867.0 121730.0 586180.0 True False 125518.32679035279 147610.68485019484 115643.10823014595 97488.09931305643 161609.98164080692 229369.4291753778 162432.76125645742 91548.334818919 99626.90056357924 580986.901241139 0.2160432989491037 0.2540688689105728 0.19904598190269387 0.16779741351275995 0.27816458735225524 0.3947927718944869 0.2795807631969995 0.15757383621446192 0.17147873790398765 1.0 19.148146111857532 -10.654965717221518 2.9891297856550882 1.0708812752048513 0.23784302889324258 0.919597649089748 0.06782223668855306 91134192.16413935 93367449.24339986 49734633.859333776 0.01945085950637638 2.2132694160168885e-11 10.654965717221518 -0.8330382463116087 KREDS(ph)APPSSVAR ddPTM_KYSE-520_SHP099_60min_R1 9 KREDSAPPSSVAR 13 2 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 1 KREDS(1)APPSSVAR;KREDS(1)APPSSVAR;KREDS(1)APPSSVAR;KREDS(0.999)APPS(0.001)SVAR;KREDS(1)APPSSVAR;KREDS(0.999)APPSSVAR;KREDS(1)APPSSVAR;KREDS(1)APPSSVAR;KREDS(0.997)APPS(0.001)S(0.002)VAR 143.43 7.7155e-06 10079970000.0 4777890.0 4640040.0 4268420.0 3984150.0 4379960.0 4251480.0 4173900.0 4520320.0 5053130.0 4511720.0 True False 4512850.917212421 4417125.513557963 4543569.1829134775 4362802.4181216275 4724637.933436589 4224944.936313568 4595838.545338448 4504640.064970618 4135608.9710411546 4471749.670865042 1.0091913119858134 0.9877846119913702 1.0160607183618446 0.9756365492788555 1.0565524193402862 0.9448080163879721 1.0277495127426042 1.0073551510094287 0.9248301616671529 1.0 22.092407997507518 -7.721475201310703 24.99978692163059 0.9624148551794482 1.0028002456287193 0.1957365188738429 0.03301648991043116 198.3292599133415 124066.0096253852 0.0203900670199065 0.007706458965307283 1.898999273938366e-08 7.721475201310703 0.04038539044927103 KREDSAPPSSVAR ddPTM_KYSE-520_SHP099_60min_R1 2 KREDSAPPSSVAR 13 2 Q9BZE4;Q9BZE4-3;Q9BZE4-2 Q9BZE4 GTPBP4 Nucleolar GTP-binding protein 1 0 ; 151.99 3.3987e-06 461670000.0 490290.0 429840.0 333020.0 318520.0 417050.0 408730.0 343910.0 398750.0 410120.0 373860.0 False True 463092.63633111597 409189.8411970067 354487.00205083954 348792.04503347 449869.4623100953 406178.9644593048 378675.779038153 397366.8293189499 335652.5462838674 370547.8912586783 1.2497511043932308 1.104283281189563 0.9566563740161007 0.9412873565376181 1.2140656388084607 1.096157808588776 1.0219347835224912 1.0723764422708573 0.9058277059511032 1.0 18.499300489346584 -4.3640703622237 3.355858050998278 1.0344710752561157 1.2575705277722242 0.39300201943306234 0.08413281892500012 0.29040875591012255 5.291729065601785 0.02231913310130305 0.1392766850196208 4.32443762979664e-05 4.3640703622237 0.22309945251610852 KREEEEEEEGSIMNGS(ph)TAEDEEQTR ddPTM_KYSE-520_SHP099_60min_R1 2 KREEEEEEEGSIMNGSTAEDEEQTR 25 2 Q0ZGT2-4;Q0ZGT2-2;Q0ZGT2;H7BXY5;Q0ZGT2-3 Q0ZGT2-4 NEXN Nexilin 1 KREEEEEEEGSIMNGS(0.996)T(0.004)AEDEEQTR;KREEEEEEEGSIMNGS(0.895)T(0.105)AEDEEQTR 297.1 5.5424999999999996e-49 926410000.0 330223.0 298328.0 309884.0 335831.0 300936.0 282649.0 293336.1 349145.0 326020.0 344853.0 True False 311904.8719067701 283995.8750805429 329859.618471931 367748.27726872836 324617.95110838296 280884.88274767704 322989.3756724536 347933.8974860556 266822.98629539245 341797.8707115742 0.9125418811341007 0.8308883682900193 0.9650721866265888 1.0759232540071977 0.9497366102151978 0.8217865200942152 0.9449718776774003 1.0179522088938326 0.7806455486100753 1.0 18.382783883962798 -13.995663729255645 0.004446190895169135 1.9051987425734722 0.030121332515055825 0.015295949610004356 0.08871037507395872 535073.5024335993 180.63700202722057 40731.15778373254 35608.256658187165 1.0100346451313772e-14 13.995663729255645 -1.8750774100584164 KREEGS(ph)DIEDEDMEELLNDTR ddPTM_KYSE-520_SHP099_60min_R1 14 KREEGSDIEDEDMEELLNDTR 21 2 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR;KREEGS(1)DIEDEDMEELLNDTR 331.4 3.347699999999999e-65 21293100000.0 8935730.0 8142080.0 7745136.0 7537946.0 7856443.0 7702732.0 7300658.0 7933990.0 9963360.0 7696259.0 True False 8440047.243963864 7750922.255288751 8244399.859215752 8254350.121473901 8474700.367054109 7654656.392404643 8038679.758195823 7906468.840497195 8154264.979866463 7628076.132858897 1.1064450717274963 1.0161044698938804 1.0807967455518652 1.0821011717380808 1.110987910903022 1.0034845299237705 1.0538279401234867 1.0364957956356895 1.0689805447458687 1.0 22.86288781202438 -6.2634357688793445 24.998984442439788 1.0361681366818158 1.0760171380083536 0.3583313062393437 0.030924401368456318 238.89958564140983 2991483.636979367 0.010504310062106649 0.009756164688868288 5.452105250658791e-07 6.2634357688793445 0.03984900132653779 KREELSNVLAAMR ddPTM_KYSE-520_SHP099_60min_R1 3 KREELSNVLAAMR 13 2 Q9Y3U8 Q9Y3U8 RPL36 60S ribosomal protein L36 0 ;; 200.13 7.0438e-09 3065840000.0 5549800.0 4741260.0 3606570.0 3417300.0 5685780.0 4620930.0 3652850.0 4141610.0 4186210.0 3391520.0 False True 5241941.530747985 4513482.752823651 3839055.272916026 3742079.164551287 6133218.538337128 4592089.061823044 4022115.7263804986 4127243.7215690427 3426099.789766382 3361473.77136263 1.5594176504977086 1.3427094958393901 1.1420750343560766 1.113225751285387 1.8245623662417942 1.366093973704148 1.1965334255010611 1.2278078016643261 1.0192255013126443 1.0 21.680662461992643 -7.418034892801057 1.3781005993953492 1.0033707529867715 1.3770108914333865 0.35624653271799944 0.19470507429726092 0.5541741587713779 1.8471656934643754 0.18253098605240103 0.06389007077457812 3.819135852783996e-08 7.418034892801057 0.37364013844661503 KRELYDK ddPTM_KYSE-520_SHP099_60min_R1 1 KRELYDK 7 2 P31689;P31689-2 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 49.418 0.053716 418710000.0 682470.0 670250.0 597470.0 459500.0 721670.0 627590.0 510770.0 509170.0 632500.0 493750.0 False True 644612.0286297845 638050.1839342391 635983.8721857995 503170.7418462876 778461.323259386 623672.97801731 562403.6162348213 507403.8081111711 517653.9440274699 489375.7591316878 1.3172128300215287 1.303804228199509 1.2995818863489321 1.0281889375539905 1.5907230971976019 1.274425564363689 1.149226551868259 1.0368388679722733 1.0577841962298191 1.0 18.90058311478618 -6.941845039404036 2.7123682312377104 1.0377234812849914 1.303332397152159 0.48303079358762835 0.12684784400988033 0.25417037386059177 3.7747092588090796 0.06419662777907655 0.0381177274342651 1.143286197921199e-07 6.941845039404036 0.2656089158671677 KREPEDEGEDDD ddPTM_KYSE-520_SHP099_60min_R1 12 KREPEDEGEDDD 12 2 P39687 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 0 ;;;;;;;;;;; 210.79 1.4084000000000002e-09 50628490000.0 13086690.0 13905750.0 17052700.0 7551250.0 11639550.0 13421910.0 10351210.0 11918870.0 17900400.0 13726050.0 False True 12360745.218030272 13237696.897043701 18151944.327284686 8268918.5296339085 12555516.365019714 13338138.881085282 11397611.324874302 11877526.22185516 14650138.592362568 13604447.875705307 0.908581173669236 0.9730418329349075 1.3342654176874207 0.607809931368142 0.9228978992555248 0.9804248583218436 0.837785658705639 0.873061981667476 1.0768638849743137 1.0 23.6975750715051 -5.25801719254007 24.994864078788222 0.8962792992410966 1.0620706766077967 0.20224945787141868 0.15617558131299922 505.05070912423645 3688754.827065046 0.04257177520486358 0.07006351391973414 5.520555844656011e-06 5.25801719254007 0.16579137736670013 KRES(ph)ES(ph)ES(ph)DETPPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 6 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 3 KRES(0.996)ES(0.998)ES(0.985)DET(0.021)PPAAPQLIK;KRES(1)ES(1)ES(0.994)DET(0.006)PPAAPQLIK;KRES(1)ES(1)ES(0.998)DET(0.003)PPAAPQLIK;KRES(1)ES(1)ES(1)DETPPAAPQLIK;KRES(1)ES(1)ES(1)DETPPAAPQLIK;KRES(0.999)ES(0.999)ES(0.999)DET(0.003)PPAAPQLIK 179.2 9.7642e-10 17490400000.0 11575360.0 9921640.0 9272550.0 9621180.0 9123810.0 8812250.0 8526570.0 10911040.0 11281610.0 9286630.0 True False 10933251.705891931 9444989.521714753 9870273.409604555 10535574.054486759 9841801.939622289 8757249.479011834 9388518.906903975 10873192.148895876 9233154.01024465 9204357.683088819 1.187834293530293 1.0261432515891953 1.0723478758044382 1.1446289265620115 1.0692546159635503 0.9514242905946106 1.0200080472919382 1.181309171510491 1.003128553685907 1.0 23.13388561737899 -5.999927396448962 24.999957600837572 1.0383114621169005 1.1003273635549078 0.2111732559579549 0.06851610841103534 5.205588422796972 1791255.269498465 0.021935102571163056 0.02463536666958164 1.0001671898289802e-06 5.999927396448962 0.06201590143800728 KRES(ph)ES(ph)ESDETPPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 11 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 KRES(0.85)ES(0.85)ES(0.297)DET(0.003)PPAAPQLIK;KRES(0.918)ES(0.918)ES(0.109)DET(0.055)PPAAPQLIK;KRES(0.956)ES(0.843)ES(0.201)DETPPAAPQLIK;KRES(0.94)ES(0.938)ES(0.118)DET(0.004)PPAAPQLIK;KRES(0.5)ES(0.5)ES(0.5)DET(0.5)PPAAPQLIK;KRES(0.5)ES(0.5)ES(0.5)DET(0.5)PPAAPQLIK;KRES(0.792)ES(0.865)ES(0.286)DET(0.058)PPAAPQLIK;KRES(0.564)ES(0.685)ES(0.601)DET(0.15)PPAAPQLIK;KRES(0.961)ES(0.935)ES(0.103)DET(0.002)PPAAPQLIK;KRES(0.999)ES(0.994)ES(0.006)DET(0.001)PPAAPQLIK;KRES(0.986)ES(0.648)ES(0.366)DETPPAAPQLIK 196.08 3.0448000000000003e-13 76462200000.0 39185560.0 30397190.0 32159630.0 31729220.0 31205430.0 30362030.0 30939440.0 34816930.0 38133870.0 34008080.0 True False 37011858.87232281 28936863.3652876 34232691.20702732 34744755.52906214 33661119.80639089 30172529.308546852 34067100.535035916 34696158.196162544 31209720.48463374 33706794.86908585 1.0980533455071457 0.8584875387195895 1.0156020867597768 1.0307938106843928 0.9986449301135762 0.8951467923821957 1.01068940750224 1.0293520440290835 0.9259177743196729 1.0 25.006536114247563 KRES(ph)ESES(ph)DETPPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 1 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 KRES(0.815)ES(0.483)ES(0.694)DET(0.008)PPAAPQLIK 95.666 0.00094927 3192000000.0 662740.0 552310.0 606830.0 516080.0 513410.0 523760.0 497750.0 567960.0 610770.0 544190.0 True False 625976.4910605637 525776.1985657887 645947.2327623294 565128.0880348907 553812.4460966944 520491.0195610927 548067.4275718665 565989.8793228602 499869.56425874756 539368.8999734131 1.1605720891423656 0.9747988780808563 1.1975982167198922 1.0477580150853105 1.0267786038905715 0.9650000576354126 1.0161272323986092 1.0493557922059638 0.9267674949063386 1.0 19.040912812570127 -5.671831795647459 2.954426574504316 0.9975835084621488 1.0998215119067394 0.3918004544162753 0.06260421754989368 0.28061287555209763 4.9339862246521795 0.018733631413928226 0.02469491609153886 2.128963444160609e-06 5.671831795647459 0.10223800344459055 KRES(ph)ESESDET(ph)PPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 1 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 KRES(0.959)ES(0.397)ES(0.14)DET(0.504)PPAAPQLIK 124.85 0.00011475 8049400000.0 4085100.0 3636300.0 3363200.0 3211700.0 3429500.0 3136000.0 3174700.0 3795400.0 3786300.0 3388800.0 True False 3858491.359555042 3461606.689802426 3579997.2533102655 3516939.002367181 3699382.13881423 3116427.0607598666 3495629.658086199 3782234.6432530154 3098803.3648556652 3358777.868446507 1.1487783684068578 1.030614951444669 1.0658630589840334 1.0470888936736462 1.1014072033662823 0.9278455387111587 1.0407445192864118 1.1260746591147346 0.9225984826108538 1.0 21.679504955939326 -1.0000000000000002 0.5719206628300638 1.0230965729867036 6.5736631465013575 0.2465036580521861 0.06245667712645825 242.81181561344835 2.074349134485072 0.029059535076712047 1668.739610974297 0.09999999999999995 1.0000000000000002 5.550566573514654 KRES(ph)ESESDETPPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 4 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KRES(0.663)ES(0.313)ES(0.024)DETPPAAPQLIK;KRES(0.321)ES(0.321)ES(0.321)DET(0.038)PPAAPQLIK;KRES(0.77)ES(0.197)ES(0.032)DETPPAAPQLIK;KRES(0.441)ES(0.441)ES(0.116)DET(0.001)PPAAPQLIK 145.81 5.6599e-07 2886000000.0 2571390.0 2203450.0 2158420.0 1961170.0 2045700.0 2096090.0 2076190.0 2037450.0 2660720.0 2022010.0 True False 2428749.8707611174 2097592.9545541233 2297555.206794106 2147559.007152739 2206684.9515591986 2083007.5248048957 2286071.546861745 2030382.5614944024 2177600.3192929192 2004096.5644999759 1.2118926372028849 1.0466526372582625 1.146429392421691 1.07158459586929 1.1010871385380419 1.0393748293883276 1.1406992993035354 1.0131161329548932 1.0865745482859168 1.0 20.934520593710033 -1.0000000000002154 0.1052877908225407 0.9702764067729392 1.4899005907577056 0.39656218259701337 0.04873404662953026 125.2460575344009 0.9291907444355217 0.48651536301915443 9.425954926904737 0.0999999999999504 1.0000000000002154 0.5196241839847664 KRES(ph)IEGK ddPTM_KYSE-520_SHP099_60min_R1 7 KRESIEGK 8 2 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 KRES(1)IEGK;KRES(1)IEGK;KRES(1)IEGK;KRES(1)IEGK;KRES(1)IEGK;KRES(1)IEGK;KRES(1)IEGK 112.13 0.00080295 22405900000.0 11601190.0 10711480.0 10358070.0 12630710.0 13193360.0 14682140.0 17574390.0 20645280.0 23047070.0 16050260.0 True False 10957648.864301082 10196884.422540726 11025767.765697964 13831128.88083856 14231602.37205018 14590503.318196686 19350980.850717697 20573666.3423246 18862303.05735525 15908067.183313316 0.688810823969555 0.6409882674644909 0.6930928590283668 0.8694411911553058 0.8946154305268678 0.9171763703324888 1.2164256428974483 1.2932851053021224 1.1857067763166582 1.0 23.92325522430287 -6.124979512293202 0.9335999916727289 1.2017450344135858 0.668539359373731 0.8203476389383919 0.09346149638583681 0.21821780062877327 0.41142940182628696 0.054251720489101075 0.057387264959156914 7.499295861924503e-07 6.124979512293202 -0.5332056750398548 KRESES(ph)ES(ph)DET(ph)PPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 1 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 3 KRES(0.126)ES(0.971)ES(0.946)DET(0.957)PPAAPQLIK 123.32 0.00011141 6600000000.0 1487800.0 1232700.0 1180600.0 1175400.0 1095800.0 1156200.0 1217600.0 1448300.0 1402100.0 1341700.0 True False 1405268.7681442318 1173479.2416795774 1256703.365026788 1287109.662603105 1182033.2257508773 1148983.726929387 1340686.8906308494 1443276.1853357605 1147513.984064689 1329813.5818268056 1.056741175867501 0.8824389055099987 0.9450222062707588 0.9678872890100604 0.888871374081683 0.8640186433883409 1.0081765662139703 1.0853221873046957 0.8629134186524955 1.0 20.34279258691234 -6.8071760282950065 24.999929677066728 0.996213325163236 0.9317797124656223 0.11910649190536016 0.07199196322774541 245.86076330407943 134386.71971921856 0.029352046669373577 0.019789226023829168 1.5589205128946152e-07 6.8071760282950065 -0.06443361269761372 KRESES(ph)ES(ph)DETPPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 2 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 KRES(0.395)ES(0.616)ES(0.98)DET(0.01)PPAAPQLIK;KRES(0.109)ES(0.892)ES(0.954)DET(0.045)PPAAPQLIK 187.17 5.3768e-13 26648500000.0 7928800.0 6761700.0 6828600.0 6683800.0 6919500.0 6253700.0 6639200.0 7620100.0 7786900.0 6974600.0 True False 7488973.658329054 6436857.782481384 7268782.482146307 7319026.342442246 7464025.283430547 6214668.338607777 7310355.128347839 7593667.65164472 6372995.251774709 6912810.470156694 1.0833471698175026 0.931149177352678 1.0514945424189452 1.0587627671898756 1.079738163754598 0.8990074826204382 1.0575083983435372 1.098492094413315 0.9219108898309273 1.0 22.72084094086636 KRESESES(ph)DET(ph)PPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 1 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 KRES(0.427)ES(0.534)ES(0.547)DET(0.493)PPAAPQLIK 121.47 0.00022082 243050000.0 438960.0 345260.0 351440.0 327020.0 347750.0 331200.0 324320.0 354670.0 402660.0 395810.0 True False 414610.0137549344 328673.19135417446 374094.38472388143 358099.88247785164 375115.94657315867 329132.85794759827 357105.43065817707 353439.7325506004 329547.09423257055 392303.43133552076 1.0568605335504593 0.8378035089707742 0.9535842790116564 0.9128135363455023 0.9561882884790208 0.8389752208567981 0.9102786316257317 0.9009345937846722 0.8400311287380066 1.0 18.581610428636143 -6.225336490797437 24.749886321669297 0.8926169462431878 0.9364417646090988 0.09963544464045859 0.0655951338757048 1266.6413442832402 868330.8591867827 0.02022312653132085 0.020222183398622105 5.952008040237768e-07 6.225336490797437 0.04382481836591101 KRESESES(ph)DETPPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 2 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KRES(0.021)ES(0.086)ES(0.891)DET(0.001)PPAAPQLIK;KRES(0.017)ES(0.079)ES(0.902)DET(0.001)PPAAPQLIK 222.57 4.0342e-19 3056600000.0 3882400.0 3167200.0 3126320.0 2809610.0 3191400.0 3001950.0 2936970.0 3111990.0 4046100.0 2873710.0 True False 3667035.532627473 3015042.9579358813 3327847.589488864 3076634.48965995 3442545.0234179096 2983213.716533186 3233867.5896649803 3101195.2330339253 3311430.23388071 2848251.1651125504 1.2874691591612386 1.0585593696463003 1.168382771242494 1.080183702668081 1.208652195278528 1.0473843574870625 1.1353870856881374 1.0888067987190237 1.162618758640921 1.0 21.441644941290434 -13.999999999999998 0.07051044799871713 0.602044002282363 1.2773873040036965 0.30229838339600135 0.0679438138311871 411.3161492700188 2.0821209106793734 27.36519312203856 3.352361891843157 1.0000000000000041e-14 13.999999999999998 0.6753433017213335 KRESESESDET(ph)PPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 1 KRESESESDETPPAAPQLIK 20 2 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KRES(0.231)ES(0.231)ES(0.231)DET(0.308)PPAAPQLIK 78.021 0.0062965 1185000000.0 378890.0 371240.0 357580.0 323860.0 356140.0 373860.0 335220.0 306220.0 425520.0 334490.0 True False 357872.21640151046 353405.07315739983 380630.17894822854 354639.5570279401 384166.19184058916 371526.601063674 369107.3090319256 305157.7942922852 348256.29448627477 331526.6788292818 1.079467322706162 1.065992861887849 1.1481132688697804 1.06971649545755 1.1587791160494019 1.120653705383964 1.1133562774958323 0.9204622547117086 1.0504623510725295 1.0 18.338765446934516 -7.240281655969331 24.5544021047565 0.9890967299782077 1.1089035719407314 0.6308080359593369 0.04125727379028422 367.65664813725397 426681.37874800415 0.018628178025718683 0.010740636127020935 5.7506686432956635e-08 7.240281655969331 0.11980684196252367 KRET(ph)DDEGEDD ddPTM_KYSE-520_SHP099_60min_R1 8 KRETDDEGEDD 11 2 Q92688 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 1 KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD;KRET(1)DDEGEDD 202.25 5.913000000000001e-07 100296530000.0 5950861.0 5032901.0 3954812.0 4960822.0 5238640.0 6056032.0 5446978.0 4760634.0 6008891.0 7202058.0 True False 5620754.877582707 4791112.881421586 4209745.509442936 5432297.031354485 5650891.16421571 6018234.057916989 5997611.6936224 4744120.471794326 4917827.866215282 7138253.369236329 0.7874131929536752 0.6711884033242369 0.5897444783321423 0.7610120782159415 0.7916349941526745 0.843096167453753 0.8402071744147185 0.6646052229303071 0.6889399425648862 1.0 22.76713967946054 -5.500543072625543 19.65802936506747 0.7902731579088446 0.6805816214049928 0.2305373467918198 0.09751119599532108 81.73805224351246 71937.30566236946 0.02782187562928278 0.04065130783964301 3.158325795236526e-06 5.500543072625543 -0.10969153650385177 KRET(ph)SMDSR ddPTM_KYSE-520_SHP099_60min_R1 1 KRETSMDSR 9 2 O75475 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 KRET(0.499)S(0.499)MDS(0.002)R 84.479 0.012830000000000001 502360000.0 398960.0 389600.0 358260.0 348450.0 345040.0 321610.0 276390.0 370140.0 485080.0 321090.0 True False 376828.8934929576 370883.0311984772 381354.01283626724 381566.5832346875 372192.684990949 319602.7126948277 304330.19850645575 368856.07073132537 397001.69987169176 318245.39240423974 1.1840827942429542 1.165399531463998 1.198301756877806 1.198969701814304 1.16951476399754 1.0042650116010599 0.9562752698706515 1.1590303568725333 1.2474703777247924 1.0 18.27978010119919 -6.109109597848892 7.141563901706919 1.0762803565523757 1.1857669057283742 0.32739679177916026 0.07894739656823384 0.3585920550867549 20.76451887259919 0.028186196038782814 0.028246404781486056 7.778402317740311e-07 6.109109597848892 0.10948654917599843 KREVS(ph)PPGAR ddPTM_KYSE-520_SHP099_60min_R1 4 KREVSPPGAR 10 2 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 KREVS(1)PPGAR;KREVS(1)PPGAR;KREVS(1)PPGAR;KREVS(1)PPGAR 66.215 0.02178 4783910000.0 1701280.0 1706510.0 1631000.0 1180740.0 1304570.0 1402710.0 1107530.0 1233500.0 1932150.0 1237680.0 True False 1606906.6069824027 1624526.6980762691 1736136.8696922674 1292957.174597573 1407232.2370120666 1393955.1665811453 1219489.9408511699 1229221.2764010653 1581320.2655378284 1226715.1181004692 1.3099264721467265 1.3242901095013804 1.415273068763204 1.053999543593852 1.1471548823749091 1.1363316111565023 0.9941101424913656 1.0020429831373374 1.2890688654644238 1.0 20.22636881798 -5.2658447044158665 24.995691851949584 1.0894901483874129 1.347275910957372 0.6471485027995822 0.08826686034459164 224.2196635012467 1272216.5994204544 0.024494880330397203 0.03777316213759076 5.421947344384426e-06 5.2658447044158665 0.2577857625699591 KRFDTEEEFK ddPTM_KYSE-520_SHP099_60min_R1 5 KRFDTEEEFK 10 2 P54136-2;P54136 P54136-2 RARS Arginine--tRNA ligase, cytoplasmic 0 ;;;; 221.5 1.8250999999999998e-09 5792520000.0 9425190.0 8329590.0 6030150.0 4902520.0 7617550.0 7743850.0 5649840.0 6851030.0 7034870.0 6194510.0 False True 8902355.922049556 7929423.993430519 6418863.117581138 5368454.026803616 8217007.847069335 7695517.7597147 6220980.964324739 6827265.375972417 5757514.942641157 6139631.460655855 1.4499821331455909 1.2915146526699621 1.0454801983986601 0.8743935301664085 1.3383552253463058 1.2534168881356016 1.013249900126773 1.111999216846007 0.9377623037370586 1.0 22.549720627877033 -4.569637800556094 3.4109959849634763 1.0831789547455835 1.4295564165464558 0.4667745289644023 0.1321242004232494 0.2181744460706669 5.017506354637612 0.03626910225945488 0.13286881695556732 2.6937804669097274e-05 4.569637800556094 0.34637746180087237 KRGHT(ph)ASESDEQQWPEEK ddPTM_KYSE-520_SHP099_60min_R1 1 KRGHTASESDEQQWPEEK 18 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 KRGHT(0.333)AS(0.333)ES(0.333)DEQQWPEEK 104.63 0.00033510000000000007 755040000.0 163420.0 209570.0 215740.0 184560.0 166790.0 165830.0 154160.0 150250.0 242170.0 127940.0 True False 154354.76683030667 199501.94262901667 229646.945596205 202100.5269100126 179915.42409471486 164794.99345848465 169743.99725661267 149728.8178186137 198198.03260890517 126806.55113581379 1.217245997527272 1.5732778854252083 1.811002219832049 1.5937703935623688 1.4188180538245205 1.2995779159862495 1.3386058980092561 1.1807656345629134 1.5629952146291628 1.0 16.952269754985174 -6.006143086862995 2.9312602944187556 1.292051243594324 1.5681592039578636 0.31178469664077146 0.1889441756436598 0.3332323265421494 5.8281268288025645 0.06470839897635904 0.07002338916399392 9.859545899714958e-07 6.006143086862995 0.27610796036353946 KRGHTAS(ph)ESDEQQWPEEK ddPTM_KYSE-520_SHP099_60min_R1 3 KRGHTASESDEQQWPEEK 18 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 KRGHT(0.107)AS(0.879)ES(0.013)DEQQWPEEK;KRGHT(0.097)AS(0.807)ES(0.097)DEQQWPEEK;KRGHT(0.103)AS(0.896)ES(0.001)DEQQWPEEK 180.32 2.3428000000000002e-09 2350850000.0 1547740.0 1768170.0 1899300.0 1836040.0 1495680.0 1519770.0 1463880.0 1343010.0 2541400.0 1342930.0 True False 1461883.7768568036 1683224.459122722 2021731.9169874447 2010536.6895744451 1613381.5067449077 1510284.5516999436 1611863.2764920222 1338351.41177089 2079945.823480496 1331032.6849837312 1.0983079479184026 1.2646003949507036 1.5189198130113204 1.5105088795013468 1.2121276396489298 1.134671273469444 1.2109869987991493 1.0054985327330623 1.562655708568057 1.0 20.344114567985677 -5.970445555113451 23.689954253074095 1.1835956214686283 1.3551982061401293 0.15583441849396729 0.18367990969222306 216.62649234603018 173639.33613216472 0.05707089882335503 0.06471093614924937 1.0704205666872669e-06 5.970445555113451 0.17160258467150102 KRHNS(ph)ISEAK ddPTM_KYSE-520_SHP099_60min_R1 1 KRHNSISEAK 10 2 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 KRHNS(0.99)IS(0.01)EAK 184.31 2.703e-06 2405200000.0 2381500.0 2561500.0 2056000.0 2228700.0 2204400.0 2061100.0 1825000.0 1829000.0 2506700.0 1562600.0 True False 2249393.447597447 2438441.6951101124 2188533.0497163096 2440514.97791691 2377873.738679717 2048235.9103737732 2009488.8102835885 1822655.6258918103 2051546.4687646767 1548756.579684404 1.4523866933665033 1.574451225645158 1.4130903967893234 1.575789901350555 1.5353437524470535 1.3225034438860301 1.2974852450299643 1.1768509330647814 1.324641002773159 1.0 20.562678980799266 -7.351397704548815 0.47976854068563596 1.0177297876219507 1.5408255350589048 0.7845118141627739 0.08091537894305294 0.406672645715323 0.22974500971422854 0.08714178741576058 0.05930876436021518 4.452483261329403e-08 7.351397704548815 0.5230957474369542 KRHNSIS(ph)EAK ddPTM_KYSE-520_SHP099_60min_R1 1 KRHNSISEAK 10 2 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 KRHNS(0.41)IS(0.59)EAK 157.56 5.7023999999999995e-05 2607400000.0 1071300.0 1174300.0 912380.0 943960.0 923130.0 902390.0 882000.0 843910.0 1086400.0 711290.0 True False 1011872.8534163969 1117884.8653397656 971193.4746596157 1033673.6745880779 995775.0791087844 896757.8492854259 971161.1674904806 840982.6731800751 889137.1459153253 704988.5239752468 1.4353040070932066 1.585678103008406 1.3776018213506631 1.4662276610680995 1.4124699129765517 1.2720176553071272 1.377555994832874 1.19290264249692 1.2612079710201696 1.0 19.42724024749611 -7.61470576763382 0.24487385484978377 0.9173113122115392 1.5807008579791955 0.8282988931768027 0.06439148135277822 0.7746802874965285 0.19670597788580957 0.20148672370564003 0.17171077948921265 2.4282546684672336e-08 7.61470576763382 0.6633895457676563 KRHS(ph)MPRLR ddPTM_KYSE-520_SHP099_60min_R1 2 KRHSMPRLR 9 3 Q9UPA5 Q9UPA5 BSN Protein bassoon 1 KRHS(1)MPRLR;KRHS(1)MPRLR 51.727 0.061253999999999996 1972310000.0 631460.0 2356160.0 5774300.0 96795.0 533040.0 2659620.0 335680.0 169273.0 299528.0 1994630.0 True False 596431.6550156977 2242966.5369317373 6146520.617206657 105994.36769752194 574987.2154172723 2643020.325044057 369613.81032109377 168685.83147161524 245141.26568641886 1976959.1299986558 0.3016914441807926 1.1345538220272984 3.1090782424069823 0.05361485024609184 0.29084426010246517 1.3369119699737313 0.18696077461214136 0.08532590730478577 0.12399915707240015 1.0 20.914851615627647 KRKDDEDSFR ddPTM_KYSE-520_SHP099_60min_R1 2 KRKDDEDSFR 10 3 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 0 ; 159.09 4.071e-05 1240960000.0 395320.0 412650.0 436200.0 278021.0 474230.0 425170.0 294340.0 327380.0 436130.0 314070.0 False True 373390.8115491179 392825.6745997222 464318.1499446761 304444.03224993846 511549.20300039987 422516.3563211962 324094.7596815735 326244.3951910667 356939.7859426096 311287.5841427628 1.1995043508637764 1.2619381389126152 1.491605106009401 0.9780153393792739 1.6433331397046436 1.357318370036312 1.0411425838716941 1.048048209470007 1.146656031674266 1.0 18.247888509795526 -6.762706390570817 24.999646067046854 1.0629656800647178 1.3259107021862255 0.3703313346277626 0.16791899214834596 37.77083659565294 745232.1535156425 0.06644292425481775 0.04761348425787898 1.7270050576475302e-07 6.762706390570817 0.2629450221215077 KRKGS(ph)DDDGGDS(ph)PVQDIDTPEVDLYQLQVNTLR ddPTM_KYSE-520_SHP099_60min_R1 2 KRKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLR 33 3 O75446 O75446 SAP30 Histone deacetylase complex subunit SAP30 2 KRKGS(1)DDDGGDS(0.986)PVQDIDT(0.014)PEVDLYQLQVNTLR;KRKGS(0.739)DDDGGDS(0.876)PVQDIDT(0.384)PEVDLY(0.001)QLQVNTLR 74.949 0.031861 350230000.0 96930.0 122892.0 116072.0 80792.0 80372.0 85355.0 62322.0 75693.0 164325.0 65024.0 True False 91553.09967483554 116988.0838553473 123554.18684176625 88470.4473889994 86696.81914587472 84822.2677841704 68622.11596410633 75430.43864987898 134487.7222961488 64447.93794790648 1.420574537991243 1.8152339326963296 1.9171162146667218 1.3727428713159202 1.3452225456142926 1.3161362564110672 1.0647682167825734 1.1704088765547425 2.0867653268418884 1.0 15.975846578944429 -5.3659660646631515 6.441261714412146 1.3286556904851425 1.7258756673504032 0.25002611710599076 0.30271520453667666 0.3276467804198701 17.248332360869874 0.08509054573139181 0.12685225919604334 4.305602527252202e-06 5.3659660646631515 0.39721997686526067 KRKPEEES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 KRKPEEESPR 10 3 P49321-4;P49321;P49321-3;Q5T624;P49321-2 P49321-4 NASP Nuclear autoantigenic sperm protein 1 KRKPEEES(1)PR;KRKPEEES(1)PR;KRKPEEES(1)PR;KRKPEEES(1)PR 98.94200000000001 0.0029779 18113200000.0 14697800.0 11983100.0 9982700.0 12333800.0 13602000.0 13310600.0 11993800.0 12440100.0 13585500.0 9375300.0 True False 13882483.73466209 11407413.889000185 10626200.814884746 13506000.643707816 14672400.01520661 13227523.608083617 13206250.35220783 12396948.19664116 11118715.6625853 9292242.135873023 1.4939864385440709 1.2276277051543316 1.1435561686303815 1.4534705882843315 1.5789945850166023 1.4235018216990174 1.421212465097594 1.3341180756345459 1.1965589682237305 1.0 23.147595317494982 -7.978676271888256 1.9343503838142098 1.0018730384325394 1.3866843810499943 0.5204980035619042 0.11854825141997645 0.3002956015465111 2.561068862170181 0.12554031391912818 0.0354594568993035 1.0503250613293355e-08 7.978676271888256 0.38481134261745487 KRKS(ph)EDGTPAEDGTPAATGGSQPPSMGR ddPTM_KYSE-520_SHP099_60min_R1 1 KRKSEDGTPAEDGTPAATGGSQPPSMGR 28 3 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 KRKS(0.925)EDGT(0.075)PAEDGTPAATGGSQPPSMGR 122.8 0.00028235 637060000.0 182600.0 182920.0 164310.0 137370.0 180180.0 178910.0 175910.0 157230.0 204650.0 147120.0 True False 172470.81399592455 174132.2486314826 174901.68550529526 150425.60349820333 194359.14091603638 177793.35632670528 193692.69951615666 156684.60582775803 167490.71880667485 145816.63125762795 1.1827924737282138 1.1941864733099394 1.1994632162107766 1.031608001095789 1.3329010500362186 1.2192940873293188 1.3283306427093462 1.074531790210738 1.148639338065308 1.0 17.153795751471563 -7.951739537987501 1.4490380192987573 1.0082869511867687 1.2055787628057428 0.33160430799952145 0.08700755334175032 0.47539618533790157 2.24780131379832 0.08262439857776716 0.024780896122657704 1.1175332717170793e-08 7.951739537987501 0.19729181161897413 KRKS(ph)ELEFETLK ddPTM_KYSE-520_SHP099_60min_R1 2 KRKSELEFETLK 12 3 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 KRKS(1)ELEFETLK;KRKS(1)ELEFETLK 228.99 2.5473e-11 18528300000.0 4463740.0 3796740.0 4080830.0 3850810.0 3749590.0 3916400.0 4125080.0 3951750.0 4515400.0 3344470.0 True False 4216127.443954922 3614338.911377076 4343886.83135886 4216789.824611756 4044661.400751261 3891956.294885182 4542083.343301163 3938042.30159538 3695517.1839709664 3314840.5977582857 1.2718944756517543 1.090350743809923 1.3104361139707543 1.272094298429743 1.2201676917697124 1.1741005879791564 1.3702267754210624 1.1880035209712783 1.1148400880784795 1.0 21.66050806579994 -7.925647106319575 2.2608943243360637 1.0037283016121796 1.2396290560911292 0.5311230032058298 0.07247369195754215 0.21738786895505144 2.4289512228076893 0.06832069355607033 0.018967203679179263 1.186732657152373e-08 7.925647106319575 0.23590075447894954 KRKS(ph)S(ph)S(ph)SVQMMESTESSNTTIEDEDVK ddPTM_KYSE-520_SHP099_60min_R1 8 KRKSSSSVQMMESTESSNTTIEDEDVK 27 3 Q13557-9;Q13557-3 Q13557-9 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 3 KRKS(0.337)S(0.352)S(0.361)S(0.364)VQMMES(0.279)T(0.28)ES(0.275)S(0.268)NT(0.249)T(0.236)IEDEDVK;KRKS(0.269)S(0.283)S(0.294)S(0.301)VQMMES(0.326)T(0.328)ES(0.321)S(0.313)NT(0.29)T(0.275)IEDEDVK;KRKS(0.371)S(0.388)S(0.397)S(0.397)VQMMES(0.256)T(0.257)ES(0.251)S(0.245)NT(0.226)T(0.213)IEDEDVK;KRKS(0.382)S(0.401)S(0.41)S(0.41)VQMMES(0.248)T(0.249)ES(0.244)S(0.237)NT(0.217)T(0.204)IEDEDVK;KRKS(0.257)S(0.276)S(0.291)S(0.3)VQMMES(0.335)T(0.338)ES(0.33)S(0.32)NT(0.287)T(0.267)IEDEDVK;KRKS(0.3)S(0.301)S(0.301)S(0.3)VQMMES(0.297)T(0.299)ES(0.303)S(0.303)NT(0.299)T(0.297)IEDEDVK;KRKS(0.264)S(0.28)S(0.293)S(0.3)VQMMES(0.33)T(0.332)ES(0.325)S(0.316)NT(0.289)T(0.272)IEDEDVK;KRKS(0.372)S(0.39)S(0.4)S(0.401)VQMMES(0.26)T(0.261)ES(0.254)S(0.247)NT(0.213)T(0.201)IEDEDVK 73.975 0.011645 3598570000.0 850483.0 726531.0 696329.0 428240.0 774118.0 731213.0 735478.0 887722.0 956680.0 773537.0 True False 803305.0125941719 691627.3602147368 741215.4815057932 468939.80084494967 835036.6824710877 726649.2284373101 809827.2938135635 884642.6995778718 782971.027940238 766684.0639826802 1.047765370811619 0.9021021731193319 0.9667808636264255 0.6116467302176027 1.0891535662464893 0.947781834231167 1.0562725010961724 1.1538555985922467 1.0212433839735133 1.0 19.548272667255407 KRKSSSSVQMMESTESS(ph)NT(ph)T(ph)IEDEDVK ddPTM_KYSE-520_SHP099_60min_R1 1 KRKSSSSVQMMESTESSNTTIEDEDVK 27 3 Q13557-9;Q13557-3 Q13557-9 CAMK2D Calcium/calmodulin-dependent protein kinase type II subunit delta 3 KRKS(0.265)S(0.273)S(0.279)S(0.283)VQMMES(0.306)T(0.307)ES(0.301)S(0.34)NT(0.326)T(0.319)IEDEDVK 57.427 0.028242000000000003 626880000.0 105880.0 92766.0 77567.0 68685.0 112460.0 78997.0 74880.0 117510.0 122740.0 94196.0 True False 100006.62533345283 88309.38211539514 82567.09293158812 75212.80174910167 121309.96219012914 78503.95042055064 82449.60115837553 117102.3852370403 100453.51002360729 93361.4967233791 1.0711763290359686 0.9458865294013776 0.8843805618950847 0.8056083545013184 1.2993575129751678 0.8408600244825777 0.8831221012090837 1.254289930505325 1.0759629349263875 1.0 16.51054006932316 -7.249646811500812 24.90273945041187 1.1238448337999025 0.9602795098632865 0.17762102235757882 0.14561023822353478 1101.8179490960126 2326750.0335244383 0.06893807665986182 0.039382449050695614 5.62798833354314e-08 7.249646811500812 -0.16356532393661605 KRLS(ph)IIGPTSR ddPTM_KYSE-520_SHP099_60min_R1 2 KRLSIIGPTSR 11 2 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 KRLS(1)IIGPTSR;KRLS(1)IIGPTSR 80.102 0.007875 900660000.0 906360.0 1013500.0 699000.0 682530.0 880080.0 951790.0 722890.0 838110.0 1005110.0 819420.0 True False 856082.4040161343 964809.938705486 744058.6584395433 747397.4459898733 949337.2890297786 945849.5255614248 795966.7759265235 835202.7920263447 822607.3607611872 812160.5762991129 1.0540802262493043 1.187954656826575 0.9161472252569816 0.9202582196191362 1.1689034369973463 1.1646090110301972 0.9800608391429415 1.0283715023847027 1.0128629544045078 1.0 19.631405472447412 KRLS(ph)QSDEDVIR ddPTM_KYSE-520_SHP099_60min_R1 4 KRLSQSDEDVIR 12 2 H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7 H0Y917 WDR26 WD repeat-containing protein 26 1 KRLS(0.982)QS(0.018)DEDVIR;KRLS(1)QSDEDVIR;KRLS(0.938)QS(0.062)DEDVIR;KRLS(0.995)QS(0.005)DEDVIR 158.65 3.067e-06 7437700000.0 6177690.0 5763570.0 5284630.0 5374600.0 5206870.0 5222040.0 4877400.0 4603760.0 6583240.0 5127670.0 True False 5835001.220780295 5486679.445905055 5625285.705506958 5885400.368067588 5616621.045962274 5189447.311342614 5370455.190836816 4587790.631085663 5387889.565975344 5082242.833066897 1.1481153916565503 1.079578372408093 1.1068510282324233 1.1580321053876175 1.1051461393026167 1.0210939307303866 1.0567096786274568 0.9027098432282398 1.0601401276853204 1.0 22.277033879326154 -6.419051578659845 1.7508932612590002 0.9934076598389437 1.1209200553166574 0.6037589057527888 0.0452648416052839 0.23928693486694566 1.4603073812439828 0.019679137836526372 0.01599712868877122 3.810205690831592e-07 6.419051578659845 0.12751239547771365 KRLS(ph)VER ddPTM_KYSE-520_SHP099_60min_R1 2 KRLSVER 7 2 P11388;P11388-2;P11388-3;P11388-4;J3KTB7 P11388 TOP2A DNA topoisomerase 2-alpha 1 KRLS(1)VER;KRLS(1)VER 94.309 0.0049186 24698000000.0 18581900.0 17316700.0 16227800.0 14894800.0 16057900.0 14660800.0 14773600.0 14762800.0 17693900.0 14630000.0 True False 17551124.964900713 16484779.7391034 17273869.953398034 16310397.313715074 17321565.37304707 14569296.509052372 16267059.664441444 14711591.292463409 14481133.786921171 14500389.58196778 1.2103898909534632 1.1368508167258722 1.191269369402272 1.1248247656737556 1.1945586203137337 1.004752074190495 1.1218360425757552 1.014565243871673 0.9986720498137129 1.0 23.7895883258602 -6.574798592586843 0.6784735495660208 0.9932924555402664 1.183427341122322 0.7042674394660233 0.04502381380800185 0.39815804165095103 0.3793058760415204 0.03544425588270745 0.027430321236901523 2.661959277718824e-07 6.574798592586843 0.1901348855820556 KRMS(ph)PKPELTEEQK ddPTM_KYSE-520_SHP099_60min_R1 1 KRMSPKPELTEEQK 14 3 P41208 P41208 CETN2 Centrin-2 1 KRMS(0.997)PKPELT(0.003)EEQK 95.666 0.0016589999999999999 717410000.0 294300.0 273490.0 317790.0 264250.0 217420.0 264250.0 231520.0 247820.0 411210.0 306470.0 True False 277974.59232749476 260351.1298831409 338275.25188197783 289364.2405503407 234529.7170494212 262600.7177314397 254924.301017456 246960.37026162277 336544.62976053136 303754.91423005186 0.915127885361446 0.8571091945724418 1.1136453635307497 0.9526240630009618 0.7721018033367445 0.8645151252847102 0.8392433803536311 0.8130251024501445 1.1079479343193306 1.0 18.212548223658853 -7.767027289053511 24.999992474482575 1.053974000627286 0.892713821002872 0.33457502000603956 0.09195014573577649 183.53252882307103 821071.998663298 0.08623966278929505 0.024736849707414448 1.709907869024736e-08 7.767027289053511 -0.16126017962441397 KRNDS(ph)EEEER ddPTM_KYSE-520_SHP099_60min_R1 5 KRNDSEEEER 10 2 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 KRNDS(1)EEEER;KRNDS(1)EEEER;KRNDS(1)EEEER;KRNDS(1)EEEER;KRNDS(1)EEEER 192.4 2.1488e-06 2040170000.0 2347710.0 2064880.0 1199050.0 1645880.0 2468630.0 3003570.0 2196650.0 2190790.0 2028510.0 3538380.0 True False 2217477.846256145 1965680.0653519318 1276342.681547831 1802303.9403481344 2662897.1364166685 2984823.6055122754 2418708.819238054 2183190.6608242323 1660183.7185757516 3507032.7060179845 0.632294601202608 0.5604966449211813 0.3639380606167879 0.5139113579566634 0.7593020537981299 0.8510965980985548 0.6896738701887802 0.6225179072547368 0.47338700769083675 1.0 21.741819454317504 -5.753451462293449 24.424360302990618 0.7175610365518172 0.5097396871845271 0.34489877031332383 0.14410037437246065 168.48326907327464 515161.15339247975 0.04390179509449481 0.05561466570380647 1.7642029246579979e-06 5.753451462293449 -0.20782134936729013 KRNDS(ph)EEEERER ddPTM_KYSE-520_SHP099_60min_R1 5 KRNDSEEEERER 12 3 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 KRNDS(1)EEEERER;KRNDS(1)EEEERER;KRNDS(1)EEEERER;KRNDS(1)EEEERER;KRNDS(1)EEEERER 193.54 8.804700000000001e-08 3052590000.0 1382580.0 1190670.0 1068784.0 1069342.0 1166297.0 1216070.0 1105340.0 1265140.0 1442450.0 785301.0 True False 1305885.5312951012 1133468.4259678943 1137679.5267548626 1170971.9421706041 1258077.9385778152 1208480.0560517372 1217078.5542788275 1260751.5246258958 1180537.441205415 778343.8440949328 1.6777745994941349 1.4562566847122744 1.4616670195134254 1.5044404231554294 1.6163523976228305 1.5526300686003005 1.56367724047983 1.619787365430907 1.5167299775822825 1.0 19.570048100835063 -8.052698566245748 22.231052023076224 0.9999999995093195 1.5515405858517666 0.861469557809339 0.06657057194860831 1589.744787389379 670637.9441847896 0.06596532561196268 0.017032173814277254 8.857301613503933e-09 8.052698566245748 0.5515405863424471 KRNEDEDS(ph)PNKLYTLVTYVPVTTFK ddPTM_KYSE-520_SHP099_60min_R1 1 KRNEDEDSPNKLYTLVTYVPVTTFK 25 3 H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899;P62899-2 H7C2W9 RPL31 60S ribosomal protein L31 1 KRNEDEDS(0.999)PNKLYT(0.001)LVTYVPVTTFK 108.52 0.00081252 1353700000.0 827760.0 980860.0 1123500.0 1017500.0 1010100.0 886800.0 734760.0 758210.0 1160500.0 557670.0 True False 781842.5027013494 933738.013299124 1195922.607663559 1114202.8940774698 1089589.1233171748 881265.1522582414 809036.7113665584 755579.9464775436 949782.4538243155 552729.4776606943 1.414512043052825 1.689321903458025 2.1636671391673157 2.0158195629317404 1.971288247423714 1.5943878296268945 1.4637118953572517 1.3669977394282808 1.7183495583482546 1.0 19.076214029527094 -6.503516945918657 3.0844246811267 1.4193145621797731 1.8672559751306135 0.4279622837327043 0.2510660832763034 0.2756834828754369 5.351864226432614 0.10368302906164772 0.08347480890128818 3.1367727327187364e-07 6.503516945918657 0.44794141295084033 KRNEDEDSPNK ddPTM_KYSE-520_SHP099_60min_R1 8 KRNEDEDSPNK 11 2 H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899;P62899-2 H7C2W9 RPL31 60S ribosomal protein L31 0 ;;;;;;; 198.81 2.7599e-07 22244880000.0 19167180.0 23687190.0 5655370.0 5079020.0 29874410.0 37181570.0 11585810.0 14934550.0 11489380.0 33272250.0 False True 18103938.316573936 22549221.83720292 6019924.1991119385 5561728.533736948 32225356.10485878 36949506.0298269 12757016.741409175 14882745.531800186 9403198.215700125 32977483.750418816 0.5489787654385249 0.6837763004558086 0.18254649883757385 0.16865230154700064 0.9771926914966492 1.1204464934156064 0.3868402100644553 0.45130021576043305 0.2851399544873009 1.0 24.97497798659868 -5.753416638186085 24.999647572365415 0.6810672908132899 0.4012989508520188 0.20235989042539815 0.29701238465166374 367.1705087999734 1144133.083994638 0.09665168891249729 0.12253071993013843 1.764344393771365e-06 5.753416638186085 -0.2797683399612711 KRNS(ph)EDEAQEAK ddPTM_KYSE-520_SHP099_60min_R1 2 KRNSEDEAQEAK 12 2 H7C007;H0Y5G7;A2RRP1-2;A2RRP1 H7C007 NBAS Neuroblastoma-amplified sequence 1 KRNS(1)EDEAQEAK;KRNS(1)EDEAQEAK 143.67 2.2565e-05 853120000.0 594430.0 570320.0 407750.0 439900.0 542930.0 543210.0 488080.0 492520.0 568930.0 541910.0 True False 561455.782933173 542920.9711322276 434034.21742306685 481707.963739242 585655.5021508699 539819.6248964815 537419.8896017617 490811.5630750324 465626.6535581798 537109.0989996006 1.0453291221074446 1.0108206547672567 0.8080932127783402 0.8968531060755688 1.0903846224941822 1.005046508990314 1.000578635891181 0.9138023615485191 0.8669126150077119 1.0 19.034855636389036 -8.696325931476165 0.0022701957847581678 2.8159957082994837e-05 1.912326449137402 0.0013906379142207825 0.08352380259973738 816495.7932422521 678.4375304765325 287639.4866986159 283830.97968109185 2.012213547053363e-09 8.696325931476165 1.9122982891803189 KRNS(ph)VDSDLK ddPTM_KYSE-520_SHP099_60min_R1 1 KRNSVDSDLK 10 2 Q8IX21;Q8IX21-2;A0A3B3IRS8;B1AL16 Q8IX21 FAM178A Protein FAM178A 1 KRNS(0.999)VDS(0.001)DLK 115.12 0.000455 1446500000.0 777810.0 862350.0 1067300.0 1008400.0 1019700.0 1180500.0 1405300.0 1674600.0 1729500.0 1287000.0 True False 734663.3287742054 820921.4115862612 1136099.86574038 1104238.032813485 1099944.5887006465 1173132.0616157593 1547361.4384063156 1668791.2034545764 1415466.39714705 1275598.181270848 0.5759363250598851 0.6435579978394111 0.8906408635739123 0.8656629093915444 0.8622970813620932 0.9196721027361421 1.2130476988174415 1.3082420686677365 1.1096491182958999 1.0 20.28274251505505 -5.534626949204821 0.5690363105560828 1.182724561861606 0.5449469098956832 0.742199688833088 0.11093388116550525 0.6412261477428584 0.38727359675488365 0.08445751424824556 0.22920897825307812 2.9199341055764116e-06 5.534626949204821 -0.6377776519659228 KRPEECDCHK ddPTM_KYSE-520_SHP099_60min_R1 2 KRPEECDCHK 10 2 H0Y872;Q8IWU5-2;Q8IWU5 H0Y872 SULF2 Extracellular sulfatase Sulf-2 0 ; 96.229 0.0038461 321170000.0 394340.0 351150.0 187970.0 210340.0 409050.0 360190.0 263590.0 350610.0 331060.0 191039.0 False True 372465.174102699 334280.22691310465 200086.84696263357 230330.65035897295 441239.9078238691 357941.92060430313 290236.2495904938 349393.8157429888 270947.84934345324 189346.54308609318 1.9671083930660638 1.7654414042357889 1.0567229995408838 1.216450253619074 2.330329884202024 1.890406419733536 1.5328309926341117 1.8452611283435176 1.4309627465459305 1.0 17.530669556509018 -8.044737277349231 5.001175118812378 1.0002069555962978 1.6855973736730043 0.2787836801137352 0.3475921282732573 0.34172798940596927 27.811146036032106 0.35925878930239474 0.09363114887899163 9.02116700185265e-09 8.044737277349231 0.6853904180767065 KRPEEEKDENYGR ddPTM_KYSE-520_SHP099_60min_R1 3 KRPEEEKDENYGR 13 3 O95171-3;O95171-2;O95171;F2Z2X8 O95171-3 SCEL Sciellin 0 ;; 234.69 4.9878e-16 5385500000.0 3031620.0 2778240.0 2463710.0 2091550.0 2746260.0 2566140.0 2490350.0 2563210.0 3240640.0 1900130.0 False True 2863449.995215356 2644769.180176741 2622524.6886753775 2290330.2831525626 2962375.037918053 2550123.768398697 2742098.881473828 2554318.8227677145 2652221.465886451 1883296.3264787723 1.5204458029019743 1.4043298141624403 1.3925183476456686 1.2161284716329415 1.5729734063979461 1.3540746257211165 1.4560103170809937 1.3563021319876745 1.408286857780554 1.0 20.844828587389195 -11.807580028336842 0.4784354635691523 3.8450038698397805e-08 1.4109072633928486 0.6412423901435511 0.0918903508414342 110.27152504220815 4.5114410167692816 113.22951419942902 0.04499757686065207 1.5574710100028021e-12 11.807580028336842 1.4109072249428098 KRPES(ph)GSIR ddPTM_KYSE-520_SHP099_60min_R1 1 KRPESGSIR 9 2 B7ZM87;O75044;A0A075B7E9 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 KRPES(0.647)GS(0.353)IR 71.153 0.016630000000000002 1004800000.0 914410.0 836490.0 828280.0 964080.0 764700.0 781320.0 741850.0 820420.0 834920.0 954150.0 True False 863685.8544688574 796303.7648029131 881672.2540948573 1055705.8733387785 824877.5394521776 776443.492064062 816843.4377582906 817574.1545074676 683319.5746204199 945696.9733174668 0.9132797067532978 0.8420284586610356 0.9322989064900848 1.116325739772017 0.8722429728822547 0.8210277858248077 0.8637475436691278 0.8645202190289882 0.7225565840856637 1.0 19.851018453851395 -5.98114962311508 24.998219610022446 0.84650522290628 0.9484184042728807 0.20526073684671298 0.09011165811703188 379.56972446102054 503359.6957106594 0.02830845646000096 0.03209407330973835 1.0443603542524561e-06 5.98114962311508 0.10191318136660066 KRPESGS(ph)IR ddPTM_KYSE-520_SHP099_60min_R1 5 KRPESGSIR 9 2 B7ZM87;O75044;A0A075B7E9 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 1 KRPES(0.127)GS(0.873)IR;KRPES(0.032)GS(0.968)IR;KRPESGS(1)IR;KRPES(0.096)GS(0.904)IR;KRPES(0.008)GS(0.992)IR 143.0 0.00028572 3362740000.0 3413250.0 3027890.0 3042890.0 3490690.0 2839840.0 2825790.0 2863280.0 3073960.0 3090750.0 3252740.0 True False 3223910.2183548138 2882425.6194444494 3239039.558196141 3822444.1280857828 3063319.2515206854 2808153.1964364215 3152728.2853198876 3063297.1502276612 2529547.7114670384 3223923.2541934303 0.9999959565294864 0.8940738944995706 1.0046887915160663 1.1856498516563143 0.9501836768403703 0.8710359940435284 0.9779166675940757 0.9501768214374089 0.7846178435472365 1.0 21.620385970103083 -5.987728092222986 24.966528410378253 0.9166974809767674 1.0179888490114921 0.2440492257782927 0.0867777219135277 352.3926396103456 716919.1170858131 0.027935798841535978 0.03165473944261911 1.028660131194781e-06 5.987728092222986 0.10129136803472472 KRPETWES(ph)PEKPK ddPTM_KYSE-520_SHP099_60min_R1 1 KRPETWESPEKPK 13 3 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 KRPET(0.111)WES(0.889)PEKPK 113.47 0.00018375 1097100000.0 1168200.0 1075500.0 1151200.0 1183600.0 1256600.0 1114900.0 1190800.0 1234100.0 1264800.0 882370.0 True False 1103397.6172510341 1023831.3656415886 1225408.193985126 1296088.9881376845 1355487.2709240287 1107941.4955488434 1311177.685088053 1229819.1951411054 1035144.2030133515 874552.8882734722 1.261670542795123 1.1706911947461742 1.4011824904086778 1.4820018383295286 1.5499202953866051 1.2668662014668126 1.4992548794579574 1.406226211852086 1.1836267616209193 1.0 19.73818610768912 -7.97713701154582 3.2825469938513177 1.0017087740256343 1.3824435345197692 0.540893304979429 0.11230903895944855 0.17412748586496438 4.395886817445336 0.11674199966484074 0.03108568405513523 1.054054310094848e-08 7.97713701154582 0.3807347604941349 KRPIYEDK ddPTM_KYSE-520_SHP099_60min_R1 2 KRPIYEDK 8 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 0 ; 133.13 0.00050715 4058600000.0 5623300.0 4620900.0 3556300.0 3386300.0 5041500.0 4673600.0 3943000.0 4651200.0 4056500.0 3567300.0 False True 5311364.33922937 4398905.027887692 3785544.7882811897 3708132.9338717824 5438237.367788871 4644430.328816103 4341596.919971617 4635066.072798246 3319941.8560433746 3535696.497317406 1.5022116132589982 1.2441410147124385 1.0706645186184245 1.0487701466133212 1.5380950745956152 1.3135828633311464 1.2279325794127582 1.3109343735569359 0.9389781782916808 1.0 21.753563009040093 -7.762202793236413 24.999884417473933 0.9694889492573114 1.2737394405891822 0.4125939347765196 0.14890977629849136 21.32056205071164 697976.3531354807 0.12499096399907077 0.03953322397654457 1.729008812300277e-08 7.762202793236413 0.30425049133187076 KRPQS(ph)PS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 KRPQSPSPR 9 2 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 2 KRPQS(1)PS(1)PR;KRPQS(1)PS(1)PR;KRPQS(1)PS(1)PR;KRPQS(1)PS(1)PR;KRPQS(1)PS(1)PR;KRPQS(1)PS(1)PR;KRPQS(1)PS(1)PR;KRPQS(1)PS(1)PR;KRPQS(1)PS(1)PR 100.09 0.0024583 80815448000.0 8270350.0 7474000.0 7006270.0 7164750.0 7053670.0 6810760.0 6735360.0 7559780.0 8449520.0 6687760.0 True False 7811577.198966023 7114937.821297276 7457905.374628355 7845685.685839371 7608753.699107672 6768251.520516851 7416235.919579003 7533556.887645914 6915300.163065594 6628511.649398544 1.1784813261473 1.0733839204978797 1.1251251818053407 1.1836270494525374 1.147882677372691 1.021081636196715 1.118838784910627 1.1365382285070724 1.0432658987169574 1.0 22.660253536633157 -6.228975692701631 24.823558210212155 1.0759094033439116 1.1393131552408744 0.37974382404341245 0.048447884299052724 801.7169422301799 613038.122958149 0.016118174061047076 0.016116661151215704 5.902341144281706e-07 6.228975692701631 0.06340375189696279 KRPQS(ph)PSPR ddPTM_KYSE-520_SHP099_60min_R1 3 KRPQSPSPR 9 2 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 KRPQS(0.993)PS(0.007)PR;KRPQS(0.996)PS(0.004)PR;KRPQS(0.988)PS(0.012)PR 62.408 0.024782 21917500000.0 6055500.0 5083600.0 4095200.0 5118400.0 4188500.0 4652700.0 4354300.0 5502400.0 4720800.0 3920430.0 True False 5719589.343660024 4839376.225360833 4359183.14455167 5604851.197096929 4518111.12069497 4623660.773468567 4794475.137872782 5483313.458669816 3863621.7216836074 3885698.0402483814 1.4719592939070523 1.24543291198497 1.1218532936421952 1.4424309709713459 1.1627540467365198 1.1899176738841533 1.2338774367465541 1.4111527457546114 0.9943185707339826 1.0 21.88974236197092 -13.999999986580354 0.09604859182039877 0.149037778714117 1.4470338770229532 0.3382631470019285 0.13190836120280622 250.10146444275335 1.6454947125971475 42.53457462065438 2.506432547355814 1.000000030899877e-14 13.999999986580354 1.297996098308836 KRPS(ph)EGNYQK ddPTM_KYSE-520_SHP099_60min_R1 2 KRPSEGNYQK 10 2 E5RH92;E5RGC1;Q9UKB1-2;Q9UKB1-3;Q9UKB1 E5RH92 FBXW11 F-box/WD repeat-containing protein 11 1 KRPS(1)EGNYQK;KRPS(1)EGNYQK 145.52 0.00014898 2911000000.0 3269560.0 3166930.0 3150210.0 3163250.0 3394600.0 3236910.0 2947100.0 3293950.0 4212320.0 2934950.0 True False 3088190.9890937284 3014785.929141158 3353277.5771142105 3463884.328934212 3661735.7073680665 3216707.2440192 3245021.6289242553 3282524.056263708 3447468.871945913 2908948.626356551 1.061617575887436 1.03638335233069 1.1527455475603157 1.1907684781881887 1.2587832161045687 1.1057971993297508 1.1155307452055745 1.1284228351516332 1.1851253888467108 1.0 21.472066387194122 -4.76497076552995 24.97166220401973 1.150386534999438 1.0490004447743952 0.24451628454805185 0.06419729717450642 102.07186049570382 721809.172042275 0.01653477646109335 0.03679620502765703 1.7180240318037268e-05 4.76497076552995 -0.10138609022504275 KRPS(ph)LPS(ph)SPS(ph)PGLPK ddPTM_KYSE-520_SHP099_60min_R1 4 KRPSLPSSPSPGLPK 15 2 O43294-2;O43294;H3BQC4;H3BSN4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 3 KRPS(0.995)LPS(0.504)S(0.504)PS(0.997)PGLPK;KRPS(0.978)LPS(0.597)S(0.429)PS(0.996)PGLPK;KRPS(0.97)LPS(0.516)S(0.516)PS(0.997)PGLPK;KRPS(0.896)LPS(0.552)S(0.552)PS(0.999)PGLPK 106.73 0.00030158 6188930000.0 6960880.0 6601010.0 6322550.0 6976950.0 6459510.0 7022560.0 7551740.0 8365590.0 9394190.0 8071740.0 True False 6574746.110229735 6283887.571281993 6730111.689437673 7640037.230303498 6967836.68741563 6978729.598153633 8315143.577080007 8336571.720833387 7688441.904258366 8000230.663318696 0.821819568325092 0.7854632992138353 0.8412397057869146 0.9549771190139934 0.8709544737707845 0.872316048354871 1.0393629792707348 1.0420414200126535 0.9610275288074015 1.0 22.931610165827752 -5.862300069363281 0.5558064423130289 1.02014605332684 0.7850858775211772 0.6893104229019409 0.04892983714755445 0.6292823585130782 0.4055196592982466 0.041096397625565176 0.07525707950573532 1.3730929288894174e-06 5.862300069363281 -0.23506017580566285 KRPS(ph)LPS(ph)SPSPGLPK ddPTM_KYSE-520_SHP099_60min_R1 2 KRPSLPSSPSPGLPK 15 2 O43294-2;O43294;H3BQC4;H3BSN4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 2 KRPS(1)LPS(0.655)S(0.306)PS(0.039)PGLPK;KRPS(0.999)LPS(0.564)S(0.427)PS(0.009)PGLPK 101.28 0.00088503 5668600000.0 5357900.0 4783300.0 4342000.0 4899900.0 4712500.0 5244100.0 5697400.0 6100900.0 6943600.0 5843600.0 True False 5060686.606291146 4553503.088120322 4621892.267445629 5365585.022791346 5083346.939542804 5211369.626699881 6273348.7932656035 6079737.4018607605 5682817.273911685 5791830.25025201 0.8737629363483069 0.786194154761734 0.7980020248771146 0.9264057803762259 0.8776754013675765 0.8997794136789709 1.0831375441282385 1.0497091833097532 0.9811781472125185 1.0 22.46558788916443 -6.613987274157982 4.430474991727225 1.031969917572634 0.8528018772818732 0.7692264126111811 0.045617358059852765 0.10885388222473312 3.8616184237394977 0.01963912127587234 0.014996154210191391 2.432275279372539e-07 6.613987274157982 -0.17916804029076083 KRPS(ph)LPSS(ph)PS(ph)PGLPK ddPTM_KYSE-520_SHP099_60min_R1 1 KRPSLPSSPSPGLPK 15 2 O43294-2;O43294;H3BQC4;H3BSN4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 3 KRPS(0.995)LPS(0.16)S(0.859)PS(0.986)PGLPK 129.2 3.2008e-05 915140000.0 1118700.0 881360.0 997450.0 1072600.0 1051400.0 1068400.0 1049300.0 1246400.0 1438400.0 1291500.0 True False 1056643.4809268396 839018.142651668 1061747.2229764264 1174539.5815110519 1134139.1983523197 1061731.7192971436 1155373.4841811333 1242076.5293119473 1177222.8191132226 1280058.3147717968 0.8254651125915411 0.6554530625436736 0.8294522294210557 0.9175672451457367 0.8860058836885951 0.8294401177234059 0.9025944137452115 0.9703280819150644 0.9196634290236166 1.0 20.287778104952352 -3.9974167703902515 0.2167014150235346 1.0094381238863268 0.47991569336709117 0.5870759418831872 0.0589600170801406 10.00800818479517 0.3848823438243503 0.1131286436647005 1.4616438858705196 0.00010059658310998106 3.9974167703902515 -0.5295224305192356 KRPS(ph)LPSS(ph)PSPGLPK ddPTM_KYSE-520_SHP099_60min_R1 6 KRPSLPSSPSPGLPK 15 2 O43294-2;O43294;H3BQC4;H3BSN4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 2 KRPS(0.997)LPS(0.277)S(0.666)PS(0.06)PGLPK;KRPS(1)LPS(0.21)S(0.71)PS(0.08)PGLPK;KRPS(0.998)LPS(0.055)S(0.915)PS(0.032)PGLPK;KRPS(0.995)LPS(0.271)S(0.635)PS(0.099)PGLPK;KRPS(0.725)LPS(0.404)S(0.87)PS(0.001)PGLPK;KRPS(0.998)LPS(0.058)S(0.937)PS(0.007)PGLPK 124.94 6.8622e-05 18713060000.0 10311300.0 9387010.0 9203140.0 9572310.0 9704070.0 10510800.0 10703100.0 12376300.0 13907100.0 11370800.0 True False 9739311.633933054 8936043.949410742 9796389.129944645 10482059.464380054 10467725.100394517 10445198.198416697 11785073.800189737 12333369.503950145 11381921.209461557 11270063.558348548 0.8641753955964556 0.7929009364628801 0.8692399185883698 0.9300798890894664 0.9288079917384601 0.9268091652135525 1.0456971905415462 1.094347821562544 1.009925201444862 1.0 23.42599231592892 -6.018503293536227 0.7689458304034573 1.0479811824132712 0.8278989629609274 0.787321394409252 0.040175542468353476 0.2973165135944643 0.39080300636880233 0.026502065278142282 0.033644811867632476 9.582894489495113e-07 6.018503293536227 -0.22008221945234385 KRPS(ph)LPSSPSPGLPK ddPTM_KYSE-520_SHP099_60min_R1 2 KRPSLPSSPSPGLPK 15 2 O43294-2;O43294;H3BQC4;H3BSN4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 KRPS(0.989)LPS(0.006)S(0.004)PS(0.001)PGLPK;KRPS(0.964)LPS(0.012)S(0.017)PS(0.006)PGLPK 74.744 0.010846 1413510000.0 2228590.0 2263750.0 2061620.0 1798030.0 1984000.0 2210540.0 2115270.0 2273540.0 2824900.0 2347720.0 True False 2104965.6701159747 2154996.052041975 2194515.323908627 1968914.2306025664 2140129.5125841745 2196743.1999018206 2329102.1346457903 2265653.620388225 2311969.3699339144 2326921.0272985213 0.9046141426465902 0.9261148215862979 0.9430983252819659 0.8461457039169099 0.9197258899107523 0.9440557604364284 1.0009373362145433 0.9736701821026451 0.9935744886959206 1.0 21.149990817687485 -6.509530469473379 2.623651708838208 0.989957191582207 0.9074784171630155 0.718236161896979 0.024748814573926137 0.16319548242616236 2.258101378128484 0.010558380063460701 0.008366071668657828 3.0936382626468855e-07 6.509530469473379 -0.08247877441919149 KRPSLPS(ph)S(ph)PSPGLPK ddPTM_KYSE-520_SHP099_60min_R1 2 KRPSLPSSPSPGLPK 15 2 O43294-2;O43294;H3BQC4;H3BSN4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 2 KRPS(0.338)LPS(0.661)S(0.652)PS(0.348)PGLPK;KRPS(0.549)LPS(0.752)S(0.698)PSPGLPK 193.32 9.7676e-09 1646220000.0 1274580.0 1204540.0 1155740.0 1217150.0 1286480.0 1528440.0 1431660.0 1596220.0 1950660.0 1678030.0 True False 1203876.506587763 1146672.0903485997 1230240.8496493828 1332827.5700505078 1387718.656930084 1518900.4390139699 1576386.1644551242 1590683.0853805493 1596469.3161369578 1663163.9596875838 0.7238471586492919 0.6894522236785336 0.7396990792660495 0.8013807431835356 0.8343847573457276 0.913259591856047 0.9478236678187998 0.956419886394935 0.9598989365046401 1.0 20.665498970161142 -5.907154911935857 0.7451530331961826 0.9800919999372798 0.689984602216493 0.9811072417408198 0.014772011010925387 0.0844269295042855 0.10373977706379187 0.009059329252395954 0.013310851663012513 1.2383547891705802e-06 5.907154911935857 -0.29010739772078675 KRPSLPSS(ph)PS(ph)PGLPK ddPTM_KYSE-520_SHP099_60min_R1 1 KRPSLPSSPSPGLPK 15 2 O43294-2;O43294;H3BQC4;H3BSN4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 2 KRPS(0.051)LPS(0.405)S(0.826)PS(0.718)PGLPK 132.84 0.00013045 1495000000.0 734260.0 707750.0 626900.0 709140.0 664160.0 739400.0 727120.0 822850.0 927360.0 741380.0 True False 693529.1340889789 673748.627645591 667310.9770754649 776536.452389285 716425.6134465254 734785.1303334968 800624.3856073436 819995.7254046344 758974.8008431852 734811.9499849117 0.9438185294934568 0.9168993885570662 0.9081384388062377 1.0567825583201662 0.9749781742951189 0.9999635013401518 1.0895636436285274 1.1159259527848884 1.0328830401557427 1.0 19.487015563112237 -5.606946317791279 0.8356923043699976 1.0620357853549613 0.9140491264664667 0.5418570341134205 0.04527446754983249 0.5119975578802403 0.7447466875773325 0.02346205541424061 0.0480493990268657 2.4720296884156792e-06 5.606946317791279 -0.1479866588884946 KRPSLPSS(ph)PSPGLPK ddPTM_KYSE-520_SHP099_60min_R1 1 KRPSLPSSPSPGLPK 15 2 O43294-2;O43294;H3BQC4;H3BSN4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 KRPS(0.001)LPS(0.086)S(0.483)PS(0.43)PGLPK 66.893 0.019397 1334200000.0 663600.0 554490.0 579200.0 577980.0 572890.0 649070.0 563350.0 635070.0 633860.0 439810.0 True False 626788.7851461963 527851.4680935412 616536.1587527667 632911.0454239765 617973.183701789 645018.9133697078 620298.9157661693 632867.0903964516 518767.0023102802 435913.6255670027 1.4378738089017473 1.2109083936225964 1.4143539513150665 1.4519184726119418 1.417650533171514 1.4796943145117731 1.4229858379841478 1.4518176383527062 1.1900683343758944 1.0 18.733682773863336 -9.754091435900628 7.230610654843409 0.9999999996171093 1.3906218528268257 0.5918714273857337 0.09619182986303638 5.677572715174026e-10 0.0 0.09291148850561354 0.02253434576987109 1.7616051208879303e-10 9.754091435900628 0.39062185320971643 KRPSLPSSPS(ph)PGLPK ddPTM_KYSE-520_SHP099_60min_R1 1 KRPSLPSSPSPGLPK 15 2 O43294-2;O43294;H3BQC4;H3BSN4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 KRPS(0.002)LPS(0.004)S(0.023)PS(0.971)PGLPK 101.49 0.00081574 1244000000.0 792060.0 611310.0 648390.0 687570.0 667490.0 766690.0 604280.0 741220.0 770340.0 656430.0 True False 748122.8528675345 581941.750004983 690186.2568606808 752916.4460745414 720017.6655014161 761904.8033207849 665366.5196044751 738648.880822049 630465.6746911001 650614.5408948121 1.149871092396146 0.8944493450832177 1.0608220589589719 1.1572388853145368 1.1066731839579722 1.1710540657036523 1.0226739148642054 1.1353095179922668 0.9690310238440097 1.0 19.31144354065602 -3.873835663485479 21.38105351006944 1.0661719961618072 42.876570814752 0.0898452733902716 0.08422484571454851 3600.7622564797457 608056.9098079205 0.020426786472842677 26247.72091603888 0.00013371013784001693 3.873835663485479 41.810398818590194 KRPVGDPFDVK ddPTM_KYSE-520_SHP099_60min_R1 1 KRPVGDPFDVK 11 2 P47895;H0Y2X5 P47895 ALDH1A3 Aldehyde dehydrogenase family 1 member A3 0 137.89 6.9342e-05 1370600000.0 2350600.0 1915400.0 1259500.0 1131700.0 1943000.0 1797100.0 1295700.0 1534700.0 1478700.0 1342800.0 False True 2220207.5321950745 1823381.3089259837 1340689.385271251 1239256.427741987 2095903.0458422643 1785883.6322996025 1426682.0008133955 1529376.483901674 1210205.3549935506 1330903.836682593 1.6681953053266096 1.3700323484459542 1.0073525587040528 0.9311389700633472 1.5747967569666836 1.341857753412967 1.0719647516905044 1.149126211638095 0.9093108920702377 1.0 20.34397490364454 -4.452655737617294 3.324222519618199 1.1444165493532035 1.6587876808382755 0.43461439650796496 0.193397040498972 0.2716146198569639 5.354919358495352 0.05288122521526744 0.2699068989761117 3.5265030385470604e-05 4.452655737617294 0.5143711314850721 KRPYEENR ddPTM_KYSE-520_SHP099_60min_R1 5 KRPYEENR 8 2 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0;M0QZV6;M0R203 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 0 ;;;; 175.91 5.0953999999999994e-05 17860810000.0 2246230.0 1949340.0 1367780.0 1397440.0 2089050.0 1925380.0 1696930.0 1944030.0 1727950.0 1222310.0 False True 2121627.1441515097 1855690.780381008 1455949.2873253787 1530252.2774443454 2253446.3499314357 1913362.9892365532 1868472.2448408375 1937286.6136700138 1414197.8380747302 1211481.2843427912 1.7512669585337075 1.5317535684322932 1.2017926369495733 1.2631249836224108 1.8600752475956683 1.579358273185806 1.5423038465298728 1.5991056888022501 1.1673294968332173 1.0 20.208340686705753 -7.8976284594666994 3.9829131180078408 1.0056412218023043 1.5318172938971473 0.49911938955838 0.18617764069696013 0.18348828988356794 5.035231358631664 0.19152084103273764 0.05061766489038909 1.2658187970414e-08 7.8976284594666994 0.526176072094843 KRQEEIER ddPTM_KYSE-520_SHP099_60min_R1 5 KRQEEIER 8 2 A0A0C4DGG8;Q8IX12-2;Q8IX12;H0YFJ7;F5H1H2;F5H2E6 A0A0C4DGG8 CCAR1 Cell division cycle and apoptosis regulator protein 1 0 ;;;; 183.27 5.4078e-06 3613920000.0 2680640.0 2347430.0 1801810.0 1620250.0 2570460.0 2492470.0 1931380.0 2142870.0 2191330.0 1867360.0 False True 2531939.55547664 2234655.9392357324 1917957.5555979337 1774238.0728540728 2772740.578083222 2476913.5701952 2126622.7388523384 2135436.8841196187 1793439.710933936 1850816.6431840954 1.368012096066285 1.2073891530342467 1.0362763716552337 0.9586244425605127 1.498117378776686 1.3382814442029136 1.149018594945069 1.1537808955758417 0.968999126703632 1.0 20.819730546611687 -7.600001791333931 2.2384275428031057 0.9791918289001241 1.2198770182384584 0.28125261216154385 0.14905349474524865 0.4679368233506274 4.3100765376636705 0.14212092190316072 0.04428534163563078 2.5118760707559848e-08 7.600001791333931 0.24068518933833427 KRQS(ph)APS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 KRQSAPSPTR 10 2 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 2 KRQS(0.997)APS(0.751)PT(0.252)R;KRQS(0.991)APS(0.589)PT(0.42)R 67.964 0.020677 1902910000.0 1074720.0 1120130.0 1030450.0 1076780.0 1037050.0 1080750.0 1029940.0 981140.0 1190910.0 1051060.0 True False 1015103.139198795 1066317.273450591 1096874.4557782942 1179116.8474542887 1118659.9349926503 1074004.638366142 1134056.3864457435 977736.6543397978 974670.7643980305 1041748.4261123065 0.9744225321146402 1.0235842423395567 1.0529168350862905 1.1318633346580866 1.073829253735827 1.0309635334648042 1.0886086871068483 0.9385535219751723 0.9356104986262348 1.0 19.99057548972299 -7.267950497043065 24.847608439872428 0.9528114990969699 1.0554508641511993 0.5125337959656167 0.04264870070641379 400.75123045017193 1529326.1014662862 0.023998838716611876 0.01195542636340641 5.395721220146602e-08 7.267950497043065 0.10263936505422933 KRQS(ph)PEPSPVTLGR ddPTM_KYSE-520_SHP099_60min_R1 6 KRQSPEPSPVTLGR 14 2 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 KRQS(1)PEPSPVTLGR;KRQS(1)PEPSPVTLGR;KRQS(0.998)PEPS(0.001)PVTLGR;KRQS(0.864)PEPS(0.089)PVT(0.047)LGR;KRQS(0.989)PEPS(0.011)PVTLGR;KRQS(0.981)PEPS(0.001)PVT(0.017)LGR 122.22 6.791e-05 22016490000.0 12244350.0 11406960.0 11221250.0 10318630.0 10613910.0 10498170.0 9478710.0 10936140.0 13299470.0 10183070.0 True False 11565131.496993406 10858952.519403972 11944589.729634808 11299309.492790768 11449164.332113046 10432647.026931554 10436910.510094881 10898205.082854273 10884621.500355756 10092855.922108566 1.1458730399251806 1.0759048383537566 1.1834697554207614 1.1195354000882392 1.13438301512196 1.033666497118885 1.0340889229611072 1.0797939816996274 1.0784481205674217 1.0 23.26683112821667 -6.256060068570893 24.690560037161948 1.049492215929511 1.1309115674813097 0.632475459748638 0.03293516929433363 264.8039140251079 1215427.2560965565 0.010882818166900135 0.010588322355331047 5.54549006318836e-07 6.256060068570893 0.08141935155179869 KRQS(ph)SADGSQPPK ddPTM_KYSE-520_SHP099_60min_R1 3 KRQSSADGSQPPK 13 2 Q15291;Q15291-2 Q15291 RBBP5 Retinoblastoma-binding protein 5 1 KRQS(0.838)S(0.156)ADGS(0.006)QPPK;KRQS(0.881)S(0.119)ADGSQPPK;KRQS(0.877)S(0.123)ADGSQPPK 90.714 0.0020074000000000003 1119880000.0 1265070.0 1098540.0 1061600.0 1006740.0 1049100.0 1098720.0 1072790.0 1136150.0 1445490.0 1108810.0 True False 1194894.0452454782 1045764.4894578421 1130032.4346200551 1102420.266912581 1131658.2014375278 1091862.4809305093 1181238.0826214422 1132208.960829403 1183025.4538375766 1098986.8060411266 1.087268781278492 0.9515714690197175 1.0282493187436563 1.0031242057252923 1.0297286511692467 0.9935173697523437 1.0748428244344523 1.030229803129259 1.0764692053939955 1.0 20.06774263534444 -6.754167196198793 24.999950756274853 1.0479046096617044 1.0133205939540268 0.12589462005549157 0.03797153088400643 293.9175452434908 1010417.5280959929 0.013598204686445107 0.010303915571433127 1.7612978453069953e-07 6.754167196198793 -0.03458401570767755 KRQS(ph)VSGLHR ddPTM_KYSE-520_SHP099_60min_R1 1 KRQSVSGLHR 10 2 Q8N1G4;J3KRP5 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KRQS(1)VSGLHR 136.3 0.00017312 283610000.0 184350.0 216900.0 177400.0 524410.0 142940.0 206970.0 149580.0 223730.0 140050.0 88865.0 True False 174123.73800738604 206479.79842646248 188835.48785003563 574249.7687303838 154188.5647826521 205678.22345837692 164701.00616012033 222953.9328489744 114620.45037319725 88077.72523592378 1.9769327323222825 2.344290771286254 2.1439641787321766 6.519806990839129 1.7505965823895286 2.335190003005301 1.8699507249869873 2.5313316420442633 1.3013557067485166 1.0 16.426489588764735 KRRT(ph)ES(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 KRRTESR 7 3 Q6IQ21 Q6IQ21 ZNF770 Zinc finger protein 770 2 KRRT(1)ES(1)R;KRRT(1)ES(1)R;KRRT(1)ES(1)R;KRRT(1)ES(1)R 62.823 0.044424 13205500000.0 8408970.0 7293740.0 6848100.0 7373340.0 8057710.0 7867360.0 7726180.0 8588360.0 8884950.0 8164100.0 True False 7942507.671233894 6943337.782273068 7289539.483347414 8074100.016724491 8691805.93490154 7818256.887990986 8507217.674650345 8558568.983698286 7271667.0513626365 8091772.425573679 0.9815535155353554 0.8580737837274025 0.9008581927377438 0.9978160027346623 1.074153532473489 0.9661983156226367 1.0513416872382213 1.0576878010866098 0.8986494761494853 1.0 22.948024315182664 -5.304613167111066 5.336783197106814 1.0126466420970819 0.9077507575944461 0.3688447731078003 0.055400698419460444 0.1851879832967996 13.333506148432939 0.015226770893260508 0.023389622221312852 4.958916926374393e-06 5.304613167111066 -0.10489588450263576 KRS(ph)DDS(ph)DEDEPCAISGK ddPTM_KYSE-520_SHP099_60min_R1 1 KRSDDSDEDEPCAISGK 17 2 Q96QB1-4;Q96QB1-1;Q96QB1-6;Q96QB1 Q96QB1-4 DLC1 Rho GTPase-activating protein 7 2 KRS(1)DDS(0.998)DEDEPCAIS(0.002)GK 63.398 0.01992 317170000.0 414610.0 418800.0 390340.0 414700.0 424490.0 374890.0 399830.0 471390.0 584030.0 396580.0 True False 391610.756795456 398680.2193683844 415501.9409660826 454112.96331589884 457894.9479822868 372550.17245161504 440248.7183647602 469754.8581132536 477984.8741982031 393066.60973457084 0.9962961673592728 1.0142815733893151 1.0570776827028423 1.155307909828696 1.1649296496883648 0.9478041716725567 1.12003591111962 1.1951024240661619 1.2160403920367993 1.0 18.5844142891875 -4.973346159709307 3.2478872335782856 1.1175745965074482 1.0055953727934992 0.23477762825066828 0.07898253342294752 0.3612862587102831 7.902209819063631 0.02273940052140745 0.0508463246071635 1.0632951680030814e-05 4.973346159709307 -0.11197922371394897 KRS(ph)EDESETEDEEEKSQEDQEQK ddPTM_KYSE-520_SHP099_60min_R1 1 KRSEDESETEDEEEKSQEDQEQK 23 3 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 KRS(0.333)EDES(0.333)ET(0.333)EDEEEKSQEDQEQK 93.322 0.0017859000000000002 52747000.0 58807.0 45421.0 42117.0 32138.0 46397.0 42790.0 44942.0 35621.0 54901.0 36506.0 True False 55544.85848115188 43238.90698168904 44831.92920958263 35192.38585735797 50048.179937181405 42522.931737855404 49485.17595165211 35497.43906500392 44932.36234158439 36182.58524123822 1.5351268603617074 1.195019833254163 1.239047152398788 0.972633260523582 1.3832118297655582 1.1752319922510934 1.367651747981031 0.9810642005908018 1.2418228836333625 1.0 15.14300787157347 -1.0000000000000002 0.09208579817283041 0.9122588056011437 2.099304567356906 0.25485907501202965 0.15361831913154317 240.8491025086679 1.5935062323094318 2.60959420597606 36.1012124367823 0.09999999999999995 1.0000000000000002 1.1870457617557624 KRS(ph)EGFSMDR ddPTM_KYSE-520_SHP099_60min_R1 10 KRSEGFSMDR 10 2 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 KRS(1)EGFSMDR;KRS(0.819)EGFS(0.181)MDR;KRS(0.888)EGFS(0.112)MDR;KRS(0.942)EGFS(0.058)MDR;KRS(0.643)EGFS(0.357)MDR;KRS(0.813)EGFS(0.187)MDR;KRS(0.972)EGFS(0.028)MDR;KRS(0.966)EGFS(0.034)MDR;KRS(0.997)EGFS(0.003)MDR;KRS(1)EGFSMDR 102.5 0.0013324 72676640000.0 29907950.0 30609780.0 31849580.0 30410930.0 32280710.0 31666080.0 33604150.0 35268750.0 44776070.0 32956990.0 True False 28248896.393479794 29139240.222583532 33902654.88792982 33301175.643820528 34821018.22488461 31468440.24878403 37001185.42689938 35146410.938038155 36645864.40086965 32665016.708750267 0.8648058148983745 0.8920626149497038 1.0378887967581543 1.019475236787491 1.066003380171448 0.963368258138815 1.1327465636038554 1.0759648847393113 1.1218688399156092 1.0 24.96124304191554 -4.353266458042605 0.7894870788640828 1.0686810577919617 0.7357731070175609 0.64173162017754 0.05101834027300668 1.3904996415142095 0.7324174323224335 0.019772707950667715 0.39905896660437457 4.4333655473393096e-05 4.353266458042605 -0.3329079507744007 KRS(ph)EGFSMDRK ddPTM_KYSE-520_SHP099_60min_R1 2 KRSEGFSMDRK 11 3 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 KRS(0.992)EGFS(0.008)MDRK;KRS(0.998)EGFS(0.002)MDRK 87.932 0.0042362 1070410000.0 688290.0 697070.0 724330.0 570320.0 726090.0 744340.0 712700.0 674610.0 942260.0 567750.0 True False 650109.1816279016 663581.7108765986 771021.4707689766 624523.0413270398 783229.1521130265 739694.2979610955 784746.6712817058 672269.935365157 771169.336441619 562720.1767028157 1.1552974436373158 1.179239235324327 1.370168518368534 1.109828769578425 1.3918625713800665 1.3144975577297338 1.394559327656998 1.194678924264336 1.3704312878208553 1.0 19.102058167541237 -4.604917615195779 9.165440826308602 1.2800490793286081 1.161272211906904 0.08916243819904024 0.12562776232217396 0.5330907526021422 53.36286205849282 0.029602823427685884 0.07864653969083024 2.4836041954152457e-05 4.604917615195779 -0.11877686742170401 KRS(ph)FVPEEEKHEER ddPTM_KYSE-520_SHP099_60min_R1 5 KRSFVPEEEKHEER 14 3 A0A0U1RRH6;O94880;O94880-2;B4DG57 A0A0U1RRH6 PHF14 PHD finger protein 14 1 KRS(1)FVPEEEKHEER;KRS(1)FVPEEEKHEER;KRS(1)FVPEEEKHEER;KRS(1)FVPEEEKHEER;KRS(1)FVPEEEKHEER 130.05 2.2292e-05 7295930000.0 2519030.0 2521090.0 2908270.0 3442780.0 2913220.0 3464300.0 3929640.0 4389080.0 6077560.0 2740460.0 True False 2379294.3843381936 2399973.0521667623 3095741.737596527 3769980.776090447 3142473.8400456035 3442678.0186831634 4326886.36079058 4373855.305898971 4974028.306819905 2716181.6564456145 0.8759702719779536 0.8835834107308413 1.1397403153247134 1.3879707813886903 1.1569453878713816 1.2674697255662346 1.5930033068748162 1.610295576335856 1.8312576020150655 1.0 21.373148538630435 -5.114883799358473 0.6113366382598469 1.526523402691658 0.7136548910780036 0.4780698098877021 0.22338443641845293 1.2655807916364616 0.7012279523606891 0.13202842121940098 0.6386857423698311 7.6756683350293e-06 5.114883799358473 -0.8128685116136545 KRS(ph)GNSDSIER ddPTM_KYSE-520_SHP099_60min_R1 9 KRSGNSDSIER 11 2 A0A5F9ZI51;A0A5F9ZGW5;C9J8U3;A0A0A0MRW7;Q7Z2E3-13;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-8;Q7Z2E3-7;Q7Z2E3 A0A5F9ZI51 APTX Aprataxin 1 KRS(1)GNSDSIER;KRS(0.948)GNS(0.052)DSIER;KRS(0.889)GNS(0.111)DSIER;KRS(0.886)GNS(0.087)DS(0.027)IER;KRS(0.934)GNS(0.062)DS(0.004)IER;KRS(0.843)GNS(0.157)DS(0.001)IER;KRS(0.753)GNS(0.245)DS(0.002)IER;KRS(0.83)GNS(0.154)DS(0.016)IER;KRS(0.89)GNS(0.107)DS(0.003)IER 169.8 9.8544e-06 11414498000.0 5875081.0 5704784.0 5913880.0 4550359.0 5661090.0 4793725.0 4456077.0 4658264.0 7784830.0 4743601.0 True False 5549178.545246379 5430717.61358464 6295098.167342563 4982823.751244687 6106585.575804009 4763805.584133004 4906540.750280584 4642105.569430991 6371301.111594261 4701576.38560573 1.1802804187624505 1.1550844159867821 1.3389335089004475 1.0598198013968292 1.2988378949876966 1.0132358156974315 1.0435948175387237 0.9873508773872496 1.355141465126576 1.0 22.16471312662278 -6.270555908705013 24.986900160875958 1.076807165366848 1.2029281039597248 0.21348774876360932 0.12144719832277868 1062.9669269826206 2913410.874810883 0.040901966528794145 0.036579111891106235 5.363448208862414e-07 6.270555908705013 0.12612093859287676 KRS(ph)IS(ph)ES(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 2 KRSISESSR 9 2 Q9H307 Q9H307 PNN Pinin 3 KRS(1)IS(0.999)ES(0.549)S(0.452)R;KRS(0.991)IS(0.972)ES(0.59)S(0.447)R 88.101 0.0023575 0.0 1260330.0 1303660.0 1272780.0 1461170.0 1217770.0 1377020.0 1346800.0 1583550.0 1837500.0 1401490.0 True False 1190416.982494432 1241030.2167664445 1354825.4353200027 1600039.157483219 1313601.5708365066 1368425.5074003658 1482947.6875013344 1578057.0346533495 1503856.3196054974 1389073.8889427222 0.8569860768173422 0.8934227521266277 0.975344397518848 1.1518747636247562 0.9456671680988399 0.985135145288727 1.0675801332858277 1.1360497430806 1.0826323434458482 1.0 20.40569191189476 -4.8802936761894005 3.1313530504640066 1.0524866652051101 0.8705930034916299 0.5680395319938729 0.06153739108835403 0.18379809667852942 3.547025500121154 0.01768252715662677 0.043942090115824665 1.3173656156749893e-05 4.8802936761894005 -0.1818936617134802 KRS(ph)IS(ph)ESS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 KRSISESSR 9 2 Q9H307 Q9H307 PNN Pinin 3 KRS(0.999)IS(1)ES(0.271)S(0.73)R;KRS(0.999)IS(0.998)ES(0.209)S(0.794)R;KRS(0.945)IS(0.967)ES(0.263)S(0.826)R;KRS(0.944)IS(0.914)ES(0.185)S(0.956)R 95.18299999999999 0.0095975 3270170000.0 6150090.0 6321210.0 6353430.0 7167140.0 5423940.0 6870190.0 6686960.0 7772140.0 9759540.0 6980820.0 True False 5808932.247799533 6017529.583270357 6762982.263647428 7848302.830720783 5850773.220002934 6827310.59584241 7362943.175240529 7745180.26037112 7987453.553982374 6918975.365795781 0.8395653894818317 0.8697139771617405 0.9774543058905064 1.1343157643715813 0.845612668159863 0.9867516843019098 1.0641666989652139 1.119411451970145 1.1544272282668697 1.0 22.722126973640513 -6.75148046241298 2.924741136630564 1.100326995735245 0.9414990279703059 0.39447121347246716 0.08786308340954606 0.28235275968481677 4.957514250978752 0.04106068586774088 0.02816859900475843 1.7722277704756448e-07 6.75148046241298 -0.15882796776493913 KRS(ph)IS(ph)ESSR ddPTM_KYSE-520_SHP099_60min_R1 1 KRSISESSR 9 2 Q9H307 Q9H307 PNN Pinin 2 KRS(0.969)IS(0.566)ES(0.399)S(0.065)R 55.31399999999999 0.043142 1475100000.0 1076500.0 1099200.0 1078800.0 1032200.0 1136600.0 1125600.0 1125200.0 1048100.0 1527400.0 1102000.0 True False 1016784.399050454 1046392.7820671616 1148341.1741410287 1130299.9776577542 1226043.9536306302 1118574.7128798799 1238946.1968937495 1044464.3857283783 1250062.6626206443 1092237.1373430255 0.9309190873365488 0.9580271044551875 1.051366168462722 1.0348485132151066 1.122507111059328 1.0241134224761146 1.1343197869169768 0.9562615571460432 1.144497490409038 1.0 20.058854685405507 -4.71898197995745 2.723784871350569 1.0614573148762168 0.9322636777550968 0.39091781560739813 0.05739037300760621 0.25227210093071456 3.6651582728059875 0.014163116766437044 0.046999913566053104 1.909932505142989e-05 4.71898197995745 -0.12919363712111998 KRS(ph)ISES(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 2 KRSISESSR 9 2 Q9H307 Q9H307 PNN Pinin 2 KRS(0.979)IS(0.057)ES(0.823)S(0.14)R;KRS(0.699)IS(0.514)ES(0.748)S(0.039)R 66.00399999999999 0.022088 5035490000.0 2319300.0 2278200.0 2218800.0 2156200.0 2142380.0 2303400.0 2197800.0 2376400.0 3124700.0 2173970.0 True False 2190643.805590074 2168751.852352084 2361827.398205522 2361124.5997148287 2310973.117525244 2289023.6261971537 2419975.07246097 2368156.8230559323 2557333.247276895 2154710.3171230643 1.0166767143506268 1.0065166696039993 1.0961229356153068 1.09579676718092 1.0725214889260934 1.0623347407801076 1.1231092426809757 1.099060418580006 1.1868571041565377 1.0 21.039062493329066 -4.76309466058577 24.96343997303885 1.0950082484215518 1.0115966693371283 0.34031396679287773 0.04460443543900403 41.15276125839675 620677.2208132786 0.011189833215619133 0.0254397687650595 1.7254617623601162e-05 4.76309466058577 -0.08341157908442343 KRS(ph)ISESS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 KRSISESSR 9 2 Q9H307 Q9H307 PNN Pinin 2 KRS(0.819)IS(0.181)ES(0.052)S(0.948)R;KRS(0.955)IS(0.058)ES(0.363)S(0.624)R;KRS(0.963)IS(0.043)ES(0.063)S(0.931)R 79.639 0.008989200000000001 6961690000.0 2563500.0 2552730.0 2442450.0 2329270.0 2494360.0 2456190.0 2509350.0 2607300.0 3657860.0 2465740.0 True False 2421297.544789445 2430093.0190741518 2599894.235058171 2550643.120479436 2690651.9410329983 2440860.007132582 2763019.586895959 2598255.8848483926 2993684.8311467557 2443895.4619166893 0.990753320884879 0.994352277723159 1.0638320155556638 1.043679306347673 1.1009685082531246 0.9987579440972787 1.130580104571653 1.063161630821411 1.2249643562081332 1.0 21.22075114425171 -4.556850908853862 0.508920225394698 1.0991802207847308 0.9276631335546683 0.24232720958825993 0.0619223867973557 4.5923430752289205 1.1336523164343209 0.03852711864797504 0.45477648377301605 2.7742723351561388e-05 4.556850908853862 -0.17151708723006243 KRS(ph)ISESSR ddPTM_KYSE-520_SHP099_60min_R1 6 KRSISESSR 9 2 Q9H307 Q9H307 PNN Pinin 1 KRS(0.922)IS(0.066)ES(0.011)S(0.001)R;KRS(0.994)IS(0.006)ESSR;KRS(0.952)IS(0.04)ES(0.007)S(0.001)R;KRS(0.89)IS(0.108)ES(0.002)SR;KRS(0.996)IS(0.004)ESSR;KRS(0.999)IS(0.001)ESSR 130.1 0.00043777 3839140000.0 3349130.0 3578590.0 3892240.0 2408579.0 2700882.0 2725800.0 2162686.0 2308410.0 4972450.0 2309333.0 True False 3163347.082574866 3406669.1648269 4143140.018204194 2637489.623994321 2913426.047483554 2708787.2711158264 2381311.406661358 2300402.6644969466 4069578.425263867 2288874.106253886 1.3820537678029818 1.4883602184667408 1.8101214072385636 1.1523087341448415 1.2728642608709697 1.183458392803087 1.0403854891603281 1.0050367812766814 1.777982639650021 1.0 21.126206682598703 -5.285564676834807 24.586290291963174 1.1999105461213364 1.552996674020135 0.327392127903424 0.23343671382908232 705.6311691676448 719112.9368909873 0.0647006630093509 0.09602730158044444 5.181259249197988e-06 5.285564676834807 0.3530861278987987 KRS(ph)PS(ph)PS(ph)PTPEAK ddPTM_KYSE-520_SHP099_60min_R1 3 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 3 KRS(0.996)PS(0.986)PS(0.923)PT(0.095)PEAK;KRS(0.96)PS(0.775)PS(0.775)PT(0.49)PEAK;KRS(0.947)PS(0.713)PS(0.802)PT(0.538)PEAK 107.57 0.00024973 2151330000.0 2879940.0 2605840.0 2322180.0 2470360.0 2504520.0 2462790.0 2316660.0 2651560.0 3210560.0 2543840.0 True False 2720183.987181945 2480651.5349544166 2471871.438419369 2705142.271659185 2701611.4752305057 2447418.8140844344 2550850.601222783 2642362.357238758 2627603.2356313556 2521303.5566775696 1.0788800023613374 0.9838765857385606 0.9803942218193912 1.0729141536705193 1.071513768374061 0.9706958162980992 1.0117189556437816 1.048014369487787 1.0421606032610613 1.0 21.265738393728103 -7.908975206333437 0.0024385770684583036 0.43341723517427083 1.6123079353149736 0.020077442941472845 0.03910747449200338 245154.50748122818 429.6410263545505 104133.98009557855 103559.97967401438 1.2331752326101285e-08 7.908975206333437 1.1788907001407027 KRS(ph)PS(ph)PSPT(ph)PEAK ddPTM_KYSE-520_SHP099_60min_R1 1 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 3 KRS(0.999)PS(0.979)PS(0.507)PT(0.514)PEAK 65.298 0.024555 0.0 282070.0 261060.0 252230.0 252520.0 274170.0 244930.0 234550.0 255780.0 303590.0 242360.0 True False 266423.0148073958 248518.28574095093 268489.1493822694 276519.42487709364 295745.61918609013 243401.30101782983 258260.6029874061 254892.75887950062 248465.7088811059 240212.87895322684 1.1091121174201175 1.0345751935696224 1.117713382197748 1.1511432113135627 1.2311813607782303 1.0132733185601752 1.075132208201432 1.0611119603172159 1.0343563174624206 1.0 17.87395397728657 -6.325931698997884 24.99998889260276 1.0429915675553088 1.1241464743301282 0.45827846028523433 0.04964188293610274 236.5612862444313 91700.26536179303 0.018880747453564387 0.016651254562231772 4.721372879225233e-07 6.325931698997884 0.0811549067748194 KRS(ph)PS(ph)PSPTPEAK ddPTM_KYSE-520_SHP099_60min_R1 5 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 KRS(0.674)PS(0.75)PS(0.569)PT(0.007)PEAK;KRS(0.998)PS(0.788)PS(0.199)PT(0.015)PEAK;KRS(0.986)PS(0.727)PS(0.285)PT(0.002)PEAK;KRS(0.514)PS(0.767)PS(0.575)PT(0.144)PEAK;KRS(0.998)PS(0.833)PS(0.167)PT(0.003)PEAK 138.66 1.0157000000000001e-05 25223600000.0 18359200.0 14886900.0 14336950.0 14714300.0 15410000.0 14702300.0 14330700.0 15743800.0 18669900.0 14036100.0 True False 17340778.57784217 14171710.978307545 15261132.736931073 16112742.647984376 16622679.329093797 14610537.49215873 15779387.01015398 15689188.432430554 15279916.789879005 13911751.073920548 1.246484248151176 1.0186863539324196 1.0969958171218375 1.1582109658495747 1.19486606975417 1.0502299397484298 1.1342488034978262 1.127765178449897 1.0983460463523724 1.0 23.729800687733963 -9.212258858387527 0.6084207821534899 0.9895831992968571 1.1268850686217868 0.27735241212878703 0.06206619511586435 9.211853112934415 3.3635154944183494 0.28594637191827554 0.02489317002199379 6.133962853362548e-10 9.212258858387527 0.13730186932492972 KRS(ph)PSPS(ph)PTPEAK ddPTM_KYSE-520_SHP099_60min_R1 5 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 KRS(0.533)PS(0.533)PS(0.933)PT(0.001)PEAK;KRS(0.934)PS(0.071)PS(0.952)PT(0.044)PEAK;KRS(0.815)PS(0.263)PS(0.817)PT(0.106)PEAK;KRS(0.995)PS(0.058)PS(0.538)PT(0.409)PEAK;KRS(0.771)PS(0.534)PS(0.466)PT(0.229)PEAK 162.81 1.4894999999999999e-06 9288100000.0 10353790.0 9011240.0 8643820.0 8580010.0 9205990.0 8614910.0 8687130.0 9350050.0 10741200.0 8761930.0 True False 9779444.628931342 8578326.504253007 9201014.467800992 9395451.570725933 9930449.038082058 8561141.151151387 9565309.878618563 9317616.858868085 8790868.84361718 8684306.116878392 1.1261054708705502 0.9877964213606648 1.0594990945699565 1.0818885751235086 1.1434936659800283 0.9858175236951139 1.1014478013422275 1.0729258887775526 1.0122707243739 1.0 23.049979150357682 -7.815181926587887 5.042297005522535 1.0022397152989704 1.0679444434860383 0.2152476039825254 0.048696081826544904 0.31723823889521285 16.102887670331775 0.04435955226309354 0.011916118491229663 1.5304462212429958e-08 7.815181926587887 0.06570472818706796 KRS(ph)PSPSPTPEAK ddPTM_KYSE-520_SHP099_60min_R1 4 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 KRS(0.496)PS(0.496)PS(0.007)PTPEAK;KRS(0.901)PS(0.099)PSPTPEAK;KRS(0.987)PS(0.013)PSPTPEAK;KRS(0.944)PS(0.056)PSPTPEAK 138.91 9.7441e-06 2537160000.0 2008600.0 1831180.0 1773080.0 1702530.0 1764820.0 1760870.0 1539060.0 1696330.0 2420760.0 1555720.0 True False 1897178.9539551688 1743207.3641427811 1887375.5738283063 1864337.9393156907 1903701.293547784 1749879.7571684401 1694643.2045781163 1690445.827156399 1981211.00639358 1541937.5311318461 1.2303863909211423 1.1305304715316156 1.2240285586945239 1.2090878532200908 1.2346163544967923 1.1348577499660157 1.0990349286940164 1.0963127837711697 1.2848840931573207 1.0 20.556312887526623 -6.347202537377593 6.701110439420396 1.1268764654812502 1.2026271094184346 0.2527239226038369 0.07092149015367771 0.40416726629688954 26.695182164835302 0.024297122180234144 0.02139084157863855 4.495701446681544e-07 6.347202537377593 0.07575064393718445 KRS(ph)PTESVNTPVGK ddPTM_KYSE-520_SHP099_60min_R1 1 KRSPTESVNTPVGK 14 2 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 KRS(0.966)PT(0.033)ES(0.001)VNTPVGK 101.05 0.00092192 560740000.0 216030.0 199740.0 201090.0 179170.0 228150.0 250920.0 223040.0 223620.0 270000.0 188110.0 True False 204046.3852548719 190144.19058414752 214052.58315537625 196198.26293057526 246104.10700407252 249353.91520595207 245587.0598606313 222844.31441330022 220974.80614611355 186443.49174736548 1.0944140948151662 1.0198489032902074 1.1480828917612294 1.0523202558147091 1.3199930161013522 1.3374235424845584 1.317219805094653 1.1952378295685353 1.185210618376203 1.0 17.508378911732443 -5.751317053313173 24.999333645415053 1.2457567830116705 1.0794235575193363 0.34339267217136316 0.0973949470136834 209.82760367579547 518213.27607346023 0.028497001660117063 0.036359197640279006 1.7728947203129443e-06 5.751317053313173 -0.1663332254923342 KRS(ph)S(ph)SEDAESLAPR ddPTM_KYSE-520_SHP099_60min_R1 2 KRSSSEDAESLAPR 14 2 Q4G0J3;Q4G0J3-3;H0YA82 Q4G0J3 LARP7 La-related protein 7 2 KRS(0.839)S(0.802)S(0.281)EDAES(0.078)LAPR;KRS(0.954)S(0.651)S(0.395)EDAESLAPR 58.427 0.034913 2280200000.0 1773800.0 1681090.0 1660270.0 1561080.0 1742960.0 1972340.0 2089950.0 2320700.0 2829800.0 1959330.0 True False 1675403.7780173651 1600327.913032467 1767293.6607259235 1709444.5738441849 1880121.0359141699 1960029.894457624 2301222.5419464046 2312650.0333554526 2315979.6534528607 1941971.860535673 0.862733292930013 0.8240736879632401 0.9100511169293841 0.8802622780397302 0.9681505041970885 1.0092988133808334 1.1849927327534169 1.190877211123714 1.192591767428608 1.0 20.889090865364615 -6.319808667933302 1.4412209158809772 1.15911035207509 0.8666716514030453 0.792458108989395 0.06129306261397584 0.16412634511450314 0.6843470716046721 0.027834778090510947 0.024021072887253907 4.788410032692357e-07 6.319808667933302 -0.2924387006720448 KRS(ph)SLS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 KRSSLSPGR 9 2 Q9BUQ8;F8W1J5;F8VVA2 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 2 KRS(0.687)S(0.314)LS(1)PGR;KRS(0.924)S(0.077)LS(0.999)PGR 103.14 0.010295 4866390000.0 3445860.0 3212700.0 2783350.0 3146230.0 2988450.0 3184480.0 3179780.0 3243400.0 3915900.0 3006490.0 True False 3254711.2766483887 3058357.0696389824 2962769.194517461 3445246.7532514585 3223624.013045454 3164604.4790971223 3501223.1940622246 3232149.402415254 3204871.271805802 2979854.837613828 1.0922381975004718 1.0263443141706918 0.994266283417333 1.1561793916143583 1.081805721659525 1.0619995441225036 1.1749643472115883 1.084666729941602 1.0755125489173694 1.0 21.506810621435907 -5.250785743093837 24.99828028661665 1.0962008842636028 1.0364890741860036 0.18018509566501795 0.05097779878680453 1094.2633596227063 2567632.8098208862 0.013460976560943194 0.023003558249531257 5.6132483439824265e-06 5.250785743093837 -0.05971181007759929 KRS(ph)SSEDAESLAPR ddPTM_KYSE-520_SHP099_60min_R1 2 KRSSSEDAESLAPR 14 2 Q4G0J3;Q4G0J3-3;H0YA82 Q4G0J3 LARP7 La-related protein 7 1 KRS(0.946)S(0.046)S(0.008)EDAESLAPR;KRS(0.853)S(0.135)S(0.01)EDAES(0.002)LAPR 116.87 9.5865e-05 1145100000.0 516550.0 520920.0 549790.0 470160.0 385300.0 498470.0 429000.0 420130.0 804290.0 557000.0 True False 487895.94178310345 495894.2212831395 585230.3430951028 514843.8650412422 415620.91794288415 495358.86383194145 472367.50663652644 418672.667089079 658251.2105009544 552065.4133394426 0.8837647314868393 0.8982526514086009 1.0600742755374688 0.9325776485923157 0.7528472313249874 0.8972829158695464 0.8556368416184168 0.7583751073202156 1.1923427814816259 1.0 19.074479694174382 -7.766250107407952 24.99999830892294 1.09617139168341 0.883770191538691 0.4649667569019932 0.09274256980287006 117.93881387623863 612859.188975485 0.08291275655474592 0.02411771130582749 1.7129705346482262e-08 7.766250107407952 -0.21240120014471897 KRS(ph)VQEGENPDDGVR ddPTM_KYSE-520_SHP099_60min_R1 2 KRSVQEGENPDDGVR 15 2 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 KRS(1)VQEGENPDDGVR;KRS(1)VQEGENPDDGVR 139.11 9.4031e-06 1633770000.0 1072660.0 1075970.0 1129400.0 834780.0 997710.0 1120110.0 1003130.0 1177380.0 1586910.0 1134970.0 True False 1013157.4115053038 1024278.7861361026 1202202.931103893 914117.2402142409 1076224.1008066311 1113118.978006291 1104536.1700053578 1173295.9435825588 1298767.1467456657 1124915.0487932984 0.9006523760101907 0.9105387888933046 1.0687055279360889 0.8126100199253434 0.956715888867432 0.9895138119099205 0.9818840731041859 1.0430084874774843 1.1545468683514006 1.0 20.10138462560009 -7.003733402264897 1.4107178639073539 1.0784613189584107 0.9334909270522127 0.39919478078627535 0.07038159636263301 0.43692852155356315 1.6669149418671745 0.049199593732219014 0.023183450517443034 9.914403676500282e-08 7.003733402264897 -0.14497039190619798 KRS(ph)WGHES(ph)PEER ddPTM_KYSE-520_SHP099_60min_R1 5 KRSWGHESPEER 12 2 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 2 KRS(1)WGHES(1)PEER;KRS(1)WGHES(1)PEER;KRS(1)WGHES(1)PEER;KRS(1)WGHES(1)PEER;KRS(1)WGHES(1)PEER 154.52 6.469299999999999e-06 7578010000.0 5048100.0 4606500.0 4455020.0 4471650.0 4759320.0 4318980.0 4124990.0 4346300.0 6046620.0 3521330.0 True False 4768071.8298621345 4385196.825502539 4742197.717484023 4896634.271549406 5133851.407173439 4292023.643775719 4541984.245222855 4331223.69973405 4948706.230885982 3490133.7557532885 1.3661573348019218 1.2564552342080844 1.3587438331458725 1.4029932988893568 1.4709612199562767 1.2297590706088444 1.3013782746107225 1.240990747874425 1.417913059271244 1.0 21.734850896608457 -12.273555416330046 0.36393836091989223 5.938660489763207e-20 1.3463678539740112 0.6307545739335398 0.07726425582274059 83.14827969941233 2.178755081939631 63.590830208347164 0.058336332819926874 5.326532529970096e-13 12.273555416330046 1.3463678539740112 KRS(ph)Y(ph)SPDGK ddPTM_KYSE-520_SHP099_60min_R1 2 KRSYSPDGK 9 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 KRS(0.958)Y(0.92)S(0.123)PDGK;KRS(0.92)Y(0.632)S(0.448)PDGK 103.88 0.005850899999999999 2189940000.0 5163140.0 4682170.0 3998240.0 4661030.0 4412960.0 4557280.0 4388150.0 4650850.0 5272500.0 4490330.0 True False 4876730.331735587 4457231.525119545 4255972.947810185 5104012.889810236 4760234.84569227 4528836.325082815 4831747.02621695 4634717.286866548 4315146.908908826 4450549.169623878 1.0957592301238919 1.0015014676259002 0.956280401721719 1.146827659976529 1.0695836995088326 1.0175904483862952 1.0856518694804775 1.041380986980138 0.9695762802399295 1.0 22.085551935832317 -7.688606184668233 5.9566389029900995 0.9852143532912655 1.0511788850425985 0.219300628823633 0.05076512337560922 0.3066416550551425 18.315276796613787 0.03724806421154531 0.013320976790120901 2.0483011806588847e-08 7.688606184668233 0.06596453175133299 KRS(ph)YESANGR ddPTM_KYSE-520_SHP099_60min_R1 2 KRSYESANGR 10 2 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 1 KRS(0.957)YES(0.042)ANGR;KRS(0.891)YES(0.109)ANGR 94.023 0.0023125 982250000.0 434800.0 482590.0 527450.0 368030.0 385380.0 366660.0 295890.0 335440.0 586420.0 343050.0 True False 410680.77724768873 459405.65201764187 561450.2709498394 403007.4605477453 415707.21348774695 364371.53893437923 325801.4488081162 334276.43693228473 479940.9104452003 340010.8438888613 1.2078461161724805 1.3511500008741102 1.6512716610101987 1.1852782574178005 1.222629280681496 1.0716468179864307 0.9582089944008089 0.9831346350869593 1.4115458935247303 1.0 18.375221233079817 -5.691861735104089 2.186761130962258 1.0857485601347605 1.3949784177228743 0.3806769470536344 0.16391301530796637 0.3156711449633408 3.091791086580872 0.054899295110134576 0.07404732647283056 2.0330041487151415e-06 5.691861735104089 0.30922985758811383 KRS(ph)YS(ph)PDGK ddPTM_KYSE-520_SHP099_60min_R1 4 KRSYSPDGK 9 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 KRS(0.844)Y(0.229)S(0.927)PDGK;KRS(0.811)Y(0.332)S(0.857)PDGK;KRS(0.952)Y(0.061)S(0.987)PDGK;KRS(0.954)Y(0.091)S(0.954)PDGK 72.49600000000001 0.011824 12751400000.0 7499570.0 6685060.0 6022650.0 6483800.0 6178950.0 6335310.0 6733510.0 6568250.0 7656130.0 6193140.0 True False 7083553.90207785 6363899.683120363 6410879.65558071 7100018.402574444 6665198.211583665 6295768.980326082 7414198.903524736 6545466.273791078 6265969.787331274 6138273.597790011 1.153997746960672 1.0367572545823935 1.044410867884554 1.1566800158811257 1.0858424775955513 1.0256579280846612 1.20786387009437 1.0663366774898515 1.0208032743257383 1.0 22.54940152099008 -7.7029539760585655 3.7249448518931834 1.0068340978813934 1.0977444623342343 0.2929599794765806 0.0557247894867086 0.29300341846039746 7.756513636050169 0.04639755846486576 0.014326951154802028 1.981737027359461e-08 7.7029539760585655 0.09091036445284084 KRS(ph)YS(ph)PDGKES(ph)PSDK ddPTM_KYSE-520_SHP099_60min_R1 2 KRSYSPDGKESPSDK 15 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 3 KRS(0.817)Y(0.299)S(0.884)PDGKES(0.994)PS(0.006)DK;KRS(0.83)Y(0.275)S(0.895)PDGKES(0.886)PS(0.114)DK 124.2 0.00020573 429870000.0 1052290.0 973230.0 860220.0 1008250.0 1018540.0 993820.0 963280.0 1088060.0 1270120.0 1073590.0 True False 993917.3760118921 926474.5699519868 915671.1576006641 1104073.7768585838 1098693.3033001428 987617.2007411887 1060657.7431068355 1084285.7738151131 1039498.225119638 1064078.8278403808 0.9340636708552071 0.8706822706286985 0.8605294397775773 1.0375864531572114 1.0325299917206456 0.928142892144207 0.9967849329917703 1.0189900836724133 0.9768996411942236 1.0 20.021173600165056 -5.257176466159751 24.999305597817973 0.997885412533382 0.8866508372281506 0.6853798946972968 0.0342304461169398 213.06091605023386 1249463.9352998268 0.009720910918117423 0.016102395151035193 5.531253130531368e-06 5.257176466159751 -0.1112345753052314 KRS(ph)YSPDGK ddPTM_KYSE-520_SHP099_60min_R1 1 KRSYSPDGK 9 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 KRS(0.995)YS(0.005)PDGK 101.32 0.0017387000000000001 836630000.0 932970.0 979070.0 1033800.0 900920.0 967940.0 1163500.0 1217900.0 1243400.0 1851000.0 1302200.0 True False 881216.2942704138 932034.0075859688 1100440.4021384842 986543.165928524 1044111.3711747604 1156238.1649215878 1341017.2175585655 1239086.9356117416 1514905.0599128031 1290663.5210962682 0.682762222582942 0.7221355468343249 0.852616025905643 0.7643689852569557 0.8089725587718707 0.895847868962391 1.0390138061851533 0.960038705176452 1.1737412851229172 1.0 20.299681505122283 -6.492865436367117 0.9982878476813353 1.0675015965371417 0.7456649651780128 0.8064149861562542 0.06445802376996004 0.22623072222569943 0.4657844155033874 0.04072173135258485 0.02963008931302841 3.214656427044789e-07 6.492865436367117 -0.3218366313591289 KRSEDDLR ddPTM_KYSE-520_SHP099_60min_R1 5 KRSEDDLR 8 2 P15924 P15924 DSP Desmoplakin 0 ;;;; 145.16 0.00034525 2317670000.0 1279150.0 1170490.0 749441.0 814130.0 1086330.0 1158680.0 762327.0 927629.0 1218060.0 819741.0 False True 1208192.9995776943 1114257.9034586907 797751.1660079964 891504.6704228912 1171817.9906278045 1151448.2483294762 839390.4527545526 924411.2715092368 996891.0087938352 812478.732488848 1.4870456927243665 1.371430240451229 0.981873289857401 1.0972652387982695 1.4422752790564752 1.4172041707507474 1.033122984257405 1.1377667310472341 1.226974896610624 1.0 19.631970523853646 -1.0000000000010605 0.026992808938595177 5.355589948266129e-13 2.9228081401625654 0.23688683707341252 0.16212545027191985 3027.3827611665515 6.290881673576105 227.34336983683943 504.3795399886835 0.09999999999975581 1.0000000000010605 2.92280814016203 KRSEDES(ph)ET(ph)EDEEEKSQEDQEQK ddPTM_KYSE-520_SHP099_60min_R1 1 KRSEDESETEDEEEKSQEDQEQK 23 3 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 KRS(0.013)EDES(0.987)ET(0.999)EDEEEKSQEDQEQK 113.5 0.00063972 128440000.0 109000.0 106240.0 104170.0 91400.0 103470.0 118490.0 110310.0 98003.0 133700.0 90892.0 True False 102953.55271388705 101136.07093050877 110884.96487789309 100086.62851958792 111612.50033623211 117750.45995836623 121461.21132185361 97663.05046707216 109423.4503027238 90086.767592906 1.142826582247072 1.1226517904109243 1.2308685042288592 1.1110025500289942 1.2389444456548708 1.3070783102183217 1.348269169460335 1.0840998414817444 1.2146450941296787 1.0 16.45902759069295 -8.638151292382029 1.2426485766224369 1.0001173521899287 1.2047768389850588 0.3473613224741806 0.08189088392752217 4.433336394343257 7.50208015136938 0.08443807753167114 0.025099034734901094 2.300640218521719e-09 8.638151292382029 0.20465948679513013 KRSEGFS(ph)MDR ddPTM_KYSE-520_SHP099_60min_R1 1 KRSEGFSMDR 10 2 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 KRS(0.42)EGFS(0.58)MDR 72.321 0.015778 17519000000.0 4605700.0 4850900.0 4455200.0 4798100.0 4958000.0 5273000.0 5167000.0 5725400.0 6695800.0 5002000.0 True False 4350212.639764675 4617855.48265066 4742389.3205720335 5254109.981398627 5348166.392838877 5240089.2510799635 5689330.785060446 5705539.923718399 5480011.5073820315 4957686.171497108 0.877468336897777 0.9314537715597623 0.9565731182899663 1.059790757149117 1.0787625936443355 1.056962677711723 1.147577839390023 1.150847336106282 1.105356676041314 1.0 22.24123551901532 -5.094978615443781 0.9928136688676931 1.1063329496097194 0.8682608610902918 0.7676914868674237 0.042279767185205486 0.3214803040687515 0.5408401734674605 0.01583607460999361 0.06182651182401625 8.035656885934378e-06 5.094978615443781 -0.23807208851942763 KRSES(ph)PPAELPSLR ddPTM_KYSE-520_SHP099_60min_R1 4 KRSESPPAELPSLR 14 2 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 KRS(0.32)ES(0.68)PPAELPSLR;KRS(0.012)ES(0.988)PPAELPSLR;KRS(0.136)ES(0.864)PPAELPSLR;KRS(0.024)ES(0.976)PPAELPSLR 164.2 2.6783000000000002e-08 2544210000.0 2344020.0 2508800.0 2800250.0 1782750.0 1943880.0 1947450.0 1587460.0 1707850.0 2910460.0 1936800.0 True False 2213992.537911979 2388273.4822144294 2980758.595558416 1952182.0239966684 2096852.2968357464 1935295.2421801034 1747935.9489165961 1701925.866965185 2381993.830725996 1919641.4588076004 1.1533364877872647 1.2441247667665625 1.5527683994749397 1.0169513765394924 1.0923145503109846 1.0081545349527024 0.9105533436448802 0.886585283494736 1.2408535040734059 1.0 20.872405445945926 -5.312554850598136 20.32720677564856 1.015158969327744 1.3094807478691577 0.512976048369497 0.13133465988588447 34.59237885206348 13756.085465777343 0.03732286514199258 0.05535941860210473 4.869060259424763e-06 5.312554850598136 0.2943217785414136 KRSPS(ph)PS(ph)PTPEAK ddPTM_KYSE-520_SHP099_60min_R1 1 KRSPSPSPTPEAK 13 2 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 KRS(0.002)PS(0.998)PS(0.986)PT(0.014)PEAK 188.66 1.3677999999999998e-07 2742100000.0 4199100.0 3500600.0 3301400.0 3387100.0 3533000.0 3313800.0 3469800.0 3519700.0 4219700.0 3083400.0 True False 3966167.5523016793 3332425.9214922762 3514213.5264267647 3709008.96563125 3811026.9999797875 3293117.345008303 3820561.2459846553 3507490.9822041527 3453508.849980577 3056083.4748488986 1.297794247095223 1.0904237233431724 1.1499075713566749 1.213647793378626 1.2470297461911493 1.0775613205955128 1.2501495058715812 1.147707846029164 1.130044018235244 1.0 21.5432525194733 -8.205374944456118 1.4674388494653545 1.000357416421314 1.1834095055906597 0.41807607084623877 0.06648176534121185 0.7384044640274128 2.996942949061643 0.0609229809509191 0.017875017992647454 6.231965716905448e-09 8.205374944456118 0.18305208916934568 KRSS(ph)ITEPEGPNGPNIQK ddPTM_KYSE-520_SHP099_60min_R1 1 KRSSITEPEGPNGPNIQK 18 2 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 KRS(0.371)S(0.572)IT(0.057)EPEGPNGPNIQK 118.36 5.4698000000000004e-05 1279800000.0 266780.0 327390.0 318260.0 274660.0 353610.0 193510.0 201060.0 295820.0 478600.0 240060.0 True False 251981.18158725466 311661.6929775916 338775.54883400415 300763.60382046 381437.0952343198 192302.2323111103 221385.1069565034 294793.86946490686 391698.3045241856 237933.25516385402 1.0590414585541077 1.309870252323342 1.423825974224177 1.2640671166934505 1.6031264522970574 0.8082192301310732 0.9304504610086781 1.2389771629942838 1.6462528714384228 1.0 17.860197401126385 -6.253055583402403 24.944022988532403 1.1275704204522252 1.332086481072584 0.15167628516224407 0.24497168787142057 1322.751532086263 3935540.1877680495 0.08531111265242207 0.08401753755578577 5.583987232157781e-07 6.253055583402403 0.20451606062035887 KRSS(ph)LS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 KRSSLSPGR 9 2 Q9BUQ8;F8W1J5;F8VVA2 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 2 KRS(0.083)S(0.922)LS(0.994)PGR;KRS(0.14)S(0.875)LS(0.985)PGR 71.558 0.016753 26355000000.0 3070900.0 2670400.0 2746200.0 2672800.0 2468600.0 2584800.0 2700100.0 2703500.0 3329500.0 2633000.0 True False 2900551.0553126237 2542109.9756478826 2923224.4460753584 2926822.1083933813 2662864.7755873483 2568667.3044171208 2973052.45843656 2694122.189501646 2724946.7298647626 2609673.6684430046 1.1114612107969668 0.9741102906420357 1.1201494199922037 1.1215280070398976 1.0203822829603362 0.9842867847724619 1.1392429997618652 1.032359801181205 1.0441714467274879 1.0 21.315437982880415 -5.7897617470740315 24.975831515024293 1.0408609817381693 1.0768576826157947 0.13225593693858295 0.05538586418220358 564.9704149314354 498211.2980494994 0.01750218359981601 0.019849332574579607 1.622700062637995e-06 5.7897617470740315 0.03599670087762541 KRSS(ph)SEDAESLAPR ddPTM_KYSE-520_SHP099_60min_R1 1 KRSSSEDAESLAPR 14 2 Q4G0J3;Q4G0J3-3;H0YA82 Q4G0J3 LARP7 La-related protein 7 1 KRS(0.373)S(0.561)S(0.065)EDAESLAPR 106.67 0.00060819 0.0 280050.0 269760.0 250650.0 218890.0 231780.0 213300.0 188550.0 216190.0 282180.0 224100.0 True False 264515.0682341658 256800.3246819849 266807.30005417974 239693.23978832175 250019.76735219744 211968.71558038256 207610.47407066904 215440.08734912527 230943.22517892747 222114.64834716162 1.1908942980686847 1.156161138371253 1.2012143370083552 1.079141972724307 1.1256338526643257 0.954321190239911 0.9346996049813752 0.9699499287971133 1.0397478369727644 1.0 17.76094501545738 -5.966413759267636 1.5916225666893775 0.9748313915897832 1.1720435306162105 0.8043817065908746 0.04189268855595947 0.15877789129584388 0.8228159076552348 0.016546178708247775 0.01887673538932681 1.08040414258969e-06 5.966413759267636 0.1972121390264273 KRT(ph)EEPDRDER ddPTM_KYSE-520_SHP099_60min_R1 11 KRTEEPDRDER 11 3 O95232;H0YA81;J3KPP4 O95232 LUC7L3 Luc7-like protein 3 1 KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER;KRT(1)EEPDRDER 165.34 1.1656e-05 72573850000.0 6269798.0 5379880.0 5330272.0 5663798.0 5668096.0 5020847.0 5518595.0 5331097.0 6815169.0 3532002.0 True False 5921999.8064075485 5121422.489435489 5673869.861856749 6202083.659037038 6114142.908145311 4989510.031484368 6076468.438896971 5312604.668794397 5577706.106029649 3500711.2101359745 1.6916561952499722 1.4629662894233892 1.6207763283725323 1.7716638953477504 1.7465430711457703 1.4252846727367054 1.735781123933656 1.5175786718459547 1.5933065515030016 1.0 21.739216621410694 -9.590807328060283 0.5879294201744719 0.9061536506395794 1.6333292108273454 0.7325543176921412 0.11276749975580931 6.612836200972916 1.7398414429657363 1.3797772336100371 0.047318202016349085 2.565622005691956e-10 9.590807328060283 0.727175560187766 KRT(ph)PNETTSVLEPK ddPTM_KYSE-520_SHP099_60min_R1 1 KRTPNETTSVLEPK 14 2 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 KRT(0.991)PNET(0.008)T(0.001)SVLEPK 136.66 1.6323e-05 1414100000.0 1048500.0 1106100.0 939800.0 828980.0 888920.0 1060000.0 912480.0 1022400.0 1214000.0 1008800.0 True False 990337.6148670699 1052961.2957100507 1000381.0117331658 907766.0099580744 958872.9467370578 1053384.1468129638 1004722.3833466131 1018853.5330299549 993568.2024495626 999862.8168345239 0.9904734911559068 1.05310576409235 1.000518265996012 0.907890557258625 0.9590045060108982 1.0535286732112747 1.004860233254272 1.018993321759433 0.9937045219814359 1.0 19.93137064227521 -6.244063806457549 24.98303569403185 1.0148196174496533 0.9830273544643169 0.156598797471308 0.03711531479050459 1834.0089189475289 2636985.401364677 0.013638265724935936 0.013602429575774585 5.700805100143613e-07 6.244063806457549 -0.03179226298533644 KRT(ph)PS(ph)VGK ddPTM_KYSE-520_SHP099_60min_R1 2 KRTPSVGK 8 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 KRT(1)PS(1)VGK;KRT(1)PS(1)VGK 59.898 0.046064999999999995 382290000.0 2577400.0 2567500.0 2398300.0 2514400.0 2204900.0 2059050.0 2296200.0 2655300.0 2860000.0 2473700.0 True False 2434426.4840804827 2444153.446103932 2552898.255415676 2753367.820018077 2378413.085835102 2046198.7051841822 2528322.3047524286 2646089.3840516782 2340696.094732906 2451784.942509478 0.99292007299334 0.996887371207307 1.0412406941380044 1.1230054366839857 0.9700741058474412 0.8345751169716518 1.0312169966117062 1.0792501977532025 0.9546906232065897 1.0 21.22540100839285 -4.543076308119097 23.93351219725051 1.0059469716899918 0.9939117589434684 0.002279142713336957 0.07367428754240692 1679.5649227682622 1990231.126046884 0.020269223607429474 0.053640254741454424 2.8636747610408813e-05 4.543076308119097 -0.012035212746523416 KRT(ph)SFDDRLEDDDFDLIEENLGVK ddPTM_KYSE-520_SHP099_60min_R1 6 KRTSFDDRLEDDDFDLIEENLGVK 24 3 Q7KZ85;Q7KZ85-3 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 KRT(0.5)S(0.5)FDDRLEDDDFDLIEENLGVK;KRT(0.5)S(0.5)FDDRLEDDDFDLIEENLGVK;KRT(0.5)S(0.5)FDDRLEDDDFDLIEENLGVK;KRT(0.5)S(0.5)FDDRLEDDDFDLIEENLGVK;KRT(0.5)S(0.5)FDDRLEDDDFDLIEENLGVK;KRT(0.5)S(0.5)FDDRLEDDDFDLIEENLGVK 238.37 1.4130999999999998e-28 2830262000.0 1307859.0 1449913.0 1660020.0 1529596.0 1369642.0 1315879.0 1274618.0 1508890.0 2353353.0 1228499.0 True False 1235309.4541177195 1380257.0031162181 1767027.5453259104 1674968.3439501955 1477425.03320303 1307666.1110604699 1403468.826512903 1503656.0127675747 1926043.4184013898 1217615.45461776 1.0145316811090528 1.1335738207671777 1.4512197086728214 1.3756135712617168 1.2133757235093825 1.0739565649410874 1.1526371656915992 1.2349186330257365 1.5818158443184538 1.0 20.2156271448411 -7.546154342123761 24.996683425581164 1.3300609411585496 1.2100006189757917 0.026792704707849446 0.17994281265009102 718.4222537811025 771529.9550386089 0.1221317055859542 0.04616669442876575 2.8434504057581022e-08 7.546154342123761 -0.12006032218275786 KRT(ph)SS(ph)EDNLYLAVLR ddPTM_KYSE-520_SHP099_60min_R1 8 KRTSSEDNLYLAVLR 15 2 Q15149-4 Q15149-4 PLEC Plectin 2 KRT(0.982)S(0.25)S(0.768)EDNLYLAVLR;KRT(0.998)S(0.42)S(0.582)EDNLYLAVLR;KRT(0.771)S(0.321)S(0.899)EDNLY(0.009)LAVLR;KRT(0.893)S(0.146)S(0.961)EDNLYLAVLR;KRT(0.998)S(0.015)S(0.987)EDNLYLAVLR;KRT(0.997)S(0.006)S(0.997)EDNLYLAVLR;KRT(0.776)S(0.237)S(0.983)EDNLY(0.004)LAVLR;KRT(0.999)S(0.086)S(0.914)EDNLYLAVLR 146.18 2.183e-05 9821210000.0 9948980.0 7573990.0 6689570.0 6241420.0 5813280.0 5800410.0 5546520.0 5998580.0 8119790.0 5677670.0 True False 9397090.246600077 7210124.151609235 7120790.38589044 6834602.680248654 6270752.062961352 5764207.489637154 6107216.37041871 5977772.326059095 6645440.819248713 5627370.260960419 1.6698901637576418 1.2812599522069994 1.2653850832049462 1.2145286987180044 1.1143308103368212 1.0243163720052395 1.0852700439470275 1.062267462215801 1.1809140879446132 1.0 22.42402946004818 -1.0000000000000828 0.55891738163669 1.0733590805310136 28.639456038319 0.899464344640392 0.05859864512804141 40.360527266211804 0.35989190421737877 0.02858432204911669 1339.953841746381 0.09999999999998092 1.0000000000000828 27.566096957787988 KRTEEPDRDER ddPTM_KYSE-520_SHP099_60min_R1 5 KRTEEPDRDER 11 3 O95232;H0YA81;J3KPP4 O95232 LUC7L3 Luc7-like protein 3 0 ;;;; 205.49 5.3269e-08 4439420000.0 1945385.0 2681960.0 2194710.0 1409715.0 1977417.0 2139660.0 1329192.0 1594763.0 2830280.0 1115375.0 False True 1837470.6160211475 2553114.6158959675 2336184.518260159 1543693.8897537289 2133028.467936323 2126305.588273422 1463559.6990238167 1589231.1393734822 2316372.4975526775 1105493.6452486191 1.6621268009260342 2.3094792329826435 2.113250065525944 1.3963842274340357 1.929480533066852 1.9233991958363794 1.3238969806060445 1.437576006161549 2.095328641198782 1.0 20.076259301403095 -10.704925954317714 0.13099595386330282 6.386972609548329e-11 2.2427174017271096 0.3704742041271759 0.3165151162254954 50.99470633721299 1.0555401112697942 20.107665769183868 3.1079973218072543 1.9727590559266393e-11 10.704925954317714 2.24271740166324 KRTES(ph)SCVK ddPTM_KYSE-520_SHP099_60min_R1 1 KRTESSCVK 9 2 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 KRT(0.001)ES(0.989)S(0.01)CVK 92.19 0.0028696999999999998 381670000.0 286240.0 372840.0 193430.0 272950.0 355560.0 522640.0 291090.0 384520.0 357770.0 649450.0 True False 270361.6965947068 354928.2067557503 205898.80729894267 298891.0859345898 383540.5491403375 519378.00989653525 320516.21796462993 383186.1898676422 292807.98664775956 643696.3782644537 0.4200143199867942 0.5513907157792536 0.319869451268455 0.4643355097638821 0.5958407753892397 0.8068680008685026 0.49793074621425054 0.5952902685281467 0.45488524797550356 1.0 19.296020826033214 -5.7851108007460335 4.043224967780238 0.6406767984804034 0.435796651199909 0.3244186341142662 0.1553717118486654 0.28429624280252924 10.236753728249303 0.047171614333980184 0.05690649388457178 1.6401712659609352e-06 5.7851108007460335 -0.20488014728049436 KRTS(ph)IETNIR ddPTM_KYSE-520_SHP099_60min_R1 1 KRTSIETNIR 10 2 P14859-6;P14859-2;P14859;P14859-3;P14859-5;P14859-4;A0A0C4DG88;A0A0A0MT46;Q9UKI9;Q9UKI9-2;H0YLC5;Q9UKI9-3 P14859-6 POU2F1;POU2F3 POU domain, class 2, transcription factor 1;POU domain protein;POU domain, class 2, transcription factor 3 1 KRT(0.11)S(0.885)IET(0.005)NIR 116.98 0.00049226 0.0 391550.0 328930.0 395950.0 362880.0 385790.0 355650.0 308110.0 365790.0 471440.0 308590.0 True False 369829.94096442667 313127.7090660046 421473.57054239983 397368.0060961498 416149.47815516527 353430.25642833125 339256.76566382323 364521.15986602753 385838.3800352738 305856.13267938676 1.209163071946968 1.023774499216075 1.3780124885846539 1.2991990796950612 1.3606053097892052 1.15554412243489 1.1092037380183861 1.1918059535792807 1.2615028400941966 1.0 18.222493678082976 -6.458794149149604 24.998002712893435 1.1531489410175242 1.2514700410570647 0.1971051900089239 0.11066047601740504 422.36055139678 164753.1948164603 0.04076694084600955 0.03595303310245278 3.4770092884130325e-07 6.458794149149604 0.09832110003954053 KRVPDHHPC ddPTM_KYSE-520_SHP099_60min_R1 2 KRVPDHHPC 9 2 P78371-2;P78371 P78371-2 CCT2 T-complex protein 1 subunit beta 0 ; 93.178 0.002408 9439600000.0 3870400.0 3147600.0 3010200.0 2712000.0 4036700.0 3220400.0 2684200.0 3096100.0 3395900.0 1642430.0 False True 3655701.196548879 2996384.5713560805 3204242.3084902884 2969747.664607468 4354365.324318823 3200300.2890532752 2955545.1312675136 3085360.3517351705 2779290.1636725464 1627879.3479912055 2.245683134355132 1.8406674764033362 1.9683536820123104 1.824304527403779 2.674869811262172 1.965932114688001 1.8155799659935736 1.8953249548515305 1.707307219728646 1.0 20.63456234601367 -8.32318900804146 0.7742604037384557 0.9942565973616737 2.070136949067963 0.6433098344510269 0.23830251186483464 0.7540770291236659 0.8703420485434769 0.24757221388382183 0.0873520831912561 4.7512840168715896e-09 8.32318900804146 1.0758803517062894 KRVS(ph)DDVPDCK ddPTM_KYSE-520_SHP099_60min_R1 2 KRVSDDVPDCK 11 2 Q9NV88-3;Q9NV88-2;Q9NV88;H0YBK3 Q9NV88-3 INTS9 Integrator complex subunit 9 1 KRVS(1)DDVPDCK;KRVS(1)DDVPDCK 88.561 0.0024156 1604230000.0 2709530.0 2417760.0 2351940.0 2094490.0 2189860.0 2395740.0 2436500.0 2441350.0 2961900.0 2244320.0 True False 2559226.969585857 2301607.180468254 2503549.8156370544 2293549.6998686176 2362189.5234009963 2380787.298005369 2682805.1979484754 2432881.5266653714 2424093.6234228653 2224437.070854537 1.1505054483751735 1.034691972465677 1.1254756758190931 1.0310697164328098 1.0619268822442076 1.0702875478921814 1.2060602806434313 1.0937066094347898 1.0897559904860012 1.0 21.085008854688734 -8.31978538846995 3.822502146835828 1.0000006321602004 1.094881142831816 0.2435715561494206 0.05077182831423874 11.33312609214099 133.97057579563793 0.04953580573380045 0.013027061180772239 4.7886667124526734e-09 8.31978538846995 0.09488051067161551 KRVS(ph)LEPHQGPGT(ph)PESK ddPTM_KYSE-520_SHP099_60min_R1 2 KRVSLEPHQGPGTPESK 17 2 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 2 KRVS(1)LEPHQGPGT(0.905)PES(0.095)K;KRVS(1)LEPHQGPGT(0.691)PES(0.309)K 106.11 0.001209 3131000000.0 3446400.0 2778900.0 2866200.0 2581760.0 2688690.0 2666380.0 2413860.0 2503160.0 3310000.0 2584810.0 True False 3255221.3217719295 2645397.4727860596 3050959.8380821436 2827129.694165552 2900274.6064465474 2649738.1333765564 2657876.5258033676 2494477.1222019386 2708987.438309766 2561910.594351749 1.2706225302899814 1.0325877408128037 1.1908923928916968 1.10352394825898 1.1320748713248583 1.0342820468514557 1.037458735548069 0.9736784444006434 1.0574090463118728 1.0 21.288788698658692 -6.250118180804108 1.3157652770184234 1.0100461795523739 1.1497279714731543 0.52348074746477 0.06024096021258345 0.35146914788610073 1.2356222540279667 0.026896134066956942 0.024490836506427784 5.621883209241899e-07 6.250118180804108 0.13968179192078045 KRVS(ph)LEPHQGPGTPESK ddPTM_KYSE-520_SHP099_60min_R1 3 KRVSLEPHQGPGTPESK 17 2 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 KRVS(1)LEPHQGPGTPESK;KRVS(1)LEPHQGPGTPESK;KRVS(1)LEPHQGPGTPESK 246.67 1.0687999999999999e-23 4158360000.0 2454560.0 2343890.0 2716210.0 2859960.0 2362200.0 2301980.0 2430440.0 2686880.0 3276150.0 2250790.0 True False 2318400.6637559473 2231286.0061493814 2891301.242689658 3131769.7385216714 2548091.700920533 2287612.488943878 2676132.594008572 2677559.840402508 2681283.7450207034 2230849.75168812 1.0392455439912869 1.000195555286021 1.2960537752494374 1.4038461066917711 1.142206775239951 1.0254444465445531 1.1996023452424347 1.2002421222569362 1.2019113985564167 1.0 21.08916192029135 -8.855883276002317 14.509853582809685 0.9999999999999979 1.170406921579049 0.15174384701459243 0.11874367883095416 0.0 0.0 0.12525076971581672 0.03037777371930742 1.3935312877543893e-09 8.855883276002317 0.17040692157905102 KRVS(ph)VELTNSLFK ddPTM_KYSE-520_SHP099_60min_R1 3 KRVSVELTNSLFK 13 2 P14923 P14923 JUP Junction plakoglobin 1 KRVS(1)VELTNSLFK;KRVS(1)VELTNSLFK;KRVS(1)VELTNSLFK 144.94 7.039400000000001e-06 2635650000.0 2657540.0 3329070.0 3104140.0 2709480.0 2989890.0 2820090.0 2330290.0 2598800.0 4540050.0 2363990.0 True False 2510120.958525349 3169136.4801640557 3304237.8311996083 2966988.1645651357 3225177.332852972 2802488.7722507287 2565858.4546387666 2589785.3693644796 3715691.3653469 2343046.8877563872 1.0713063283718345 1.352570662040272 1.410231202997231 1.2662948317718947 1.3764886011057507 1.1960873625257604 1.0950947964578444 1.105306676916039 1.5858373918009405 1.0 21.159954394228073 -6.2946194901337105 21.71928904630215 1.1967111196992914 1.3033206226629441 0.07855471656954116 0.1682872841041519 355.7031732187711 232835.94616038806 0.05831239191084332 0.05143522888984182 5.074351060535875e-07 6.2946194901337105 0.10660950296365268 KRYS(ph)DIFR ddPTM_KYSE-520_SHP099_60min_R1 2 KRYSDIFR 8 2 Q9P107;Q9P107-2;K7ELE8 Q9P107 GMIP GEM-interacting protein 1 KRYS(1)DIFR;KRYS(1)DIFR 84.479 0.0044182 1583270000.0 1654430.0 1720600.0 1605920.0 1739820.0 1663180.0 1608490.0 1613580.0 1730880.0 2227800.0 1624060.0 True False 1562655.4698755594 1637939.7933267474 1709440.1727628503 1905171.9697040452 1794062.8038002753 1598450.81727093 1776696.4134232288 1724875.9812704308 1823287.6782678226 1609672.0918995612 0.970791180228193 1.0175611552001425 1.0619803756090183 1.1835776859719094 1.1145517231917192 0.9930288443931526 1.103762947971946 1.0715697873813035 1.1327075169180423 1.0 20.618335394575837 -4.674238880983382 2.7229979804016113 1.088453524215624 0.9789388328959301 0.31475141149486796 0.054399434943221935 0.3227774816807156 4.602283929217959 0.01476300235762402 0.05277191477580118 2.1171962642526508e-05 4.674238880983382 -0.10951469131969382 KRYS(ph)VDK ddPTM_KYSE-520_SHP099_60min_R1 2 KRYSVDK 7 2 F8WBA3;Q15139;O94806;Q9BZL6-2;Q9BZL6;Q9BZL6-3 F8WBA3;O94806;Q9BZL6-2 PRKD1;PRKD3;PRKD2 Serine/threonine-protein kinase;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase D3;Serine/threonine-protein kinase D2 1 KRY(0.005)S(0.995)VDK;KRYS(1)VDK 61.78 0.029575 852080000.0 1725530.0 1573130.0 1450400.0 1438840.0 1410750.0 1566280.0 1395830.0 1420550.0 1879130.0 1293450.0 True False 1629811.4111412233 1497554.473483731 1543895.1047220528 1575586.92099698 1521767.9989305048 1556504.2655379348 1536934.1183880242 1415622.443608861 1537927.3610123966 1281991.0392888733 1.2713126388506488 1.168147379808857 1.2042947707173202 1.2290155490251833 1.1870348171658336 1.2141303783225625 1.1988649462328294 1.1042373934174405 1.199639711885578 1.0 20.289954747334896 -13.999999999999998 0.17242381833624193 0.20955033992970137 1.2410447804586247 0.7545437088963591 0.0355585997101456 62.12525552110057 0.5888176304212535 16.700727793145337 0.11948179176217581 1.0000000000000041e-14 13.999999999999998 1.0314944405289233 KS(ph)APATGGVK ddPTM_KYSE-520_SHP099_60min_R1 2 KSAPATGGVK 10 1 Q71DI3;P68431;Q16695;Q5TEC6 Q71DI3;Q5TEC6 HIST2H3A;HIST1H3A;HIST3H3;HIST2H3PS2 Histone H3.2;Histone H3.1;Histone H3.1t;Histone H3 1 KS(1)APATGGVK;KS(1)APATGGVK 121.45 0.00032607 1178160000.0 554410.0 1817670.0 1107380.0 1893150.0 1892490.0 1302850.0 1788690.0 795610.0 1792660.0 1244090.0 True False 523655.77211106487 1730346.4048217065 1178763.4866706464 2073074.406803696 2041418.1962048495 1294718.4298823297 1969508.24113214 792850.2146067707 1467158.1332810835 1233068.3304873726 0.4246770103195246 1.4032850913767154 0.9559595827140722 1.6812323822997786 1.6555596682934637 1.049997309857589 1.597241768713408 0.6429896827318524 1.189843333906067 1.0 20.23382131823266 -7.26475629469726 24.99536908215106 0.937312412658468 1.271149706497087 0.11898536562253725 0.3819465179605143 610.3849230860886 4599639.166762465 0.19551073756967516 0.09993882395895637 5.4355526315810075e-08 7.26475629469726 0.33383729383861893 KS(ph)ASPEVSEGHENQHGQESEAK ddPTM_KYSE-520_SHP099_60min_R1 3 KSASPEVSEGHENQHGQESEAK 22 1 O60930 O60930 RNASEH1 Ribonuclease H1 1 KS(0.576)AS(0.424)PEVSEGHENQHGQESEAK;KS(0.79)AS(0.21)PEVSEGHENQHGQESEAK;KS(0.5)AS(0.5)PEVSEGHENQHGQESEAK 253.74 7.0856e-28 427190000.0 137919.0 174504.0 174428.0 377831.0 155189.0 130312.0 121396.0 129618.0 173704.0 114386.0 True False 130268.35813528989 166120.5659041561 185671.90797466785 413739.94464096765 167401.4913953756 129498.67447121779 133667.89239078716 129168.38541106864 142163.73232149813 113372.62903096141 1.1490282905913238 1.4652616537523315 1.6377137018138823 3.649381232290006 1.4765600200526285 1.1422393180619677 1.1790137843084085 1.1393260129461538 1.2539510950449428 1.0 16.790712854332472 -5.990780300697339 24.99977409794441 1.1711514286150027 1.9958168000842766 0.28253106237344405 0.6244286895808489 289.1727098609237 784103.574361742 0.20584692022880047 0.23310461071216368 1.0214560834930794e-06 5.990780300697339 0.824665371469274 KS(ph)DASDMNSDTSPSCR ddPTM_KYSE-520_SHP099_60min_R1 2 KSDASDMNSDTSPSCR 16 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KS(0.992)DAS(0.008)DMNSDTSPSCR;KS(0.768)DAS(0.229)DMNS(0.003)DTSPSCR 193.41 1.0026e-09 374260000.0 221439.0 185341.0 187445.0 184027.0 202379.0 212376.0 196707.0 208456.0 219312.0 207673.0 True False 209155.33724229745 176436.94015748717 199528.00462260394 201516.8707502649 218305.07592100423 211050.48260712292 216592.06323531724 207732.9147899961 179490.4692056166 205833.1787871491 1.0161400531961067 0.8571841585361687 0.9693675519092804 0.9790300666670086 1.0605922582906433 1.0253472440678235 1.052269923204625 1.0092294935833037 0.8720191286130146 1.0 17.651116027191446 -5.222890791798135 2.9368935141280703 1.0071219943442864 0.9342289642665091 0.13570253972746193 0.060979165944350475 0.43342459294964464 7.47708299890392 0.017594816305507268 0.03216768044674211 5.985620912659146e-06 5.222890791798135 -0.07289303007777725 KS(ph)DNHSPAVVTTTVSSK ddPTM_KYSE-520_SHP099_60min_R1 2 KSDNHSPAVVTTTVSSK 17 1 O75179-6;O75179-2;O75179;H0YM23;O75179-4;O75179-7 O75179-6 ANKRD17 Ankyrin repeat domain-containing protein 17 1 KS(0.989)DNHS(0.011)PAVVTTTVSSK;KS(1)DNHSPAVVTTTVSSK 253.13 4.076399999999999e-24 3214900000.0 1598940.0 1358730.0 1159050.0 1401860.0 1345880.0 1395060.0 1527740.0 1510660.0 1608700.0 1432650.0 True False 1510243.6107921337 1293454.5713046908 1233764.2175455699 1535092.3529154214 1451793.0989903158 1386352.9130687697 1682178.8685055603 1505419.8730506964 1316600.632026862 1419957.8355848351 1.0635834198345142 0.9109105488135556 0.8688738402133059 1.0810830536268465 1.0224198652999923 0.9763338588837572 1.1846681826384828 1.0601863205541326 0.9272110755912666 1.0 20.437416660113424 -5.274917988953433 24.79627916319662 1.0416381374615369 0.9441013917453847 0.20361737881881103 0.07928151575175738 1006.169635536209 1851024.5528945094 0.02273917765090806 0.03393932055890489 5.309847045423415e-06 5.274917988953433 -0.09753674571615223 KS(ph)EDFVK ddPTM_KYSE-520_SHP099_60min_R1 2 KSEDFVK 7 1 Q9H9J4-2;Q9H9J4 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 KS(1)EDFVK;KS(1)EDFVK 99.522 0.0034650999999999996 727640000.0 1176890.0 961890.0 943710.0 1019400.0 1109750.0 1126940.0 1113950.0 1172560.0 1186460.0 1032910.0 True False 1111605.5656279502 915679.3605736742 1004543.0565893877 1116283.4695062141 1197081.011386234 1119906.349442831 1226558.9371043309 1168492.663037561 971028.7722226586 1023759.2209918211 1.0858076223733772 0.894428437661896 0.9812298009059037 1.0903769622946646 1.1692993692662403 1.0939157630813447 1.1980931765537963 1.1413744941955413 0.9484933100596866 1.0 19.965445015592667 -5.281875917723393 5.045157971593511 1.10605515266252 0.9770383327032802 0.23724029609436803 0.08286741998825277 0.21536340538463267 16.31015954812473 0.02299969185347103 0.03646981180852079 5.225454641381831e-06 5.281875917723393 -0.12901681995923975 KS(ph)ELEFETLK ddPTM_KYSE-520_SHP099_60min_R1 1 KSELEFETLK 10 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 KS(0.999)ELEFET(0.001)LK 132.06 3.9348000000000003e-05 0.0 304950.0 289550.0 230330.0 265140.0 275610.0 313060.0 269320.0 283100.0 408270.0 328050.0 True False 288033.8155972462 275639.58337658964 245177.44034103016 290338.8258827519 297298.93899361143 311106.0764162894 296545.49390990485 282117.9921760365 334138.45964916213 325143.7322190383 0.8858661172136869 0.8477468764211041 0.7540586394446086 0.8929553213320455 0.914361586996028 0.9568263066092498 0.9120443192493473 0.8676716301761068 1.027663849980243 1.0 18.31071808771624 -5.5900762807425695 3.175575068869667 0.9390287253851451 0.8300714417911516 0.48990105139331486 0.05289607265011382 0.22290866619442087 4.551214508236837 0.01610429163589534 0.022086595215598574 2.5699443506441566e-06 5.5900762807425695 -0.10895728359399359 KS(ph)ESPFR ddPTM_KYSE-520_SHP099_60min_R1 1 KSESPFR 7 1 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 KS(0.66)ES(0.34)PFR 60.06399999999999 0.044558999999999994 308700000.0 1010200.0 907860.0 804860.0 751660.0 891980.0 922580.0 870220.0 1046000.0 1013000.0 976000.0 True False 954162.1922162252 864245.0428743585 856742.563421533 823097.5404051796 962173.7513280399 916821.8360063246 958190.3301287596 1042371.6701382357 829064.7356519011 967353.3993165102 0.9863636111584398 0.8934119045686886 0.8856562286614902 0.8508757409512847 0.9946455473334461 0.9477630787818713 0.9905276921606676 1.0775500152009907 0.8570443193125513 1.0 19.883683514397237 -5.779340473169813 24.991267569356154 0.9809216518689801 0.9019993201756242 0.26287376297040244 0.060414016450317125 310.80350181516087 433903.1880735025 0.01834477917356834 0.020843284775547796 1.6621090983792182e-06 5.779340473169813 -0.07892233169335583 KS(ph)ESPFRETEPLVS(ph)PHQDK ddPTM_KYSE-520_SHP099_60min_R1 1 KSESPFRETEPLVSPHQDK 19 2 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 2 KS(0.576)ES(0.423)PFRET(0.001)EPLVS(1)PHQDK 137.35 2.0257e-06 743850000.0 230300.0 256110.0 210680.0 222270.0 253740.0 218190.0 219980.0 195080.0 333780.0 207430.0 True False 217524.79990833194 243806.09117105242 224260.76989991855 243394.47397208743 273707.89441688923 216828.19527652883 242217.72519790925 194403.3130120145 273173.96590907325 205592.33157809792 1.0580394620686582 1.1858715220535272 1.0908031840415657 1.1838694182016691 1.3313137329390927 1.054651180869374 1.1781457184646915 0.945576673603543 1.3287167075358706 1.0 17.64942692865454 KS(ph)FTPDHVVYAR ddPTM_KYSE-520_SHP099_60min_R1 1 KSFTPDHVVYAR 12 1 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 1 KS(0.905)FT(0.095)PDHVVYAR 74.296 0.011825 7299400000.0 1486200.0 1758900.0 1827500.0 2128100.0 1559000.0 1411900.0 1496900.0 1328300.0 1795500.0 1382400.0 True False 1403757.5233337523 1674399.8038372751 1945303.5741033833 2330353.984163405 1681684.430503392 1403087.8083822883 1648221.2603361665 1323692.4373275521 1469482.460871657 1370153.0114909257 1.0245261015091007 1.2220531501188212 1.4197710458532002 1.7007983521691792 1.2273698020584392 1.024037313070257 1.2029468581342329 0.9660909593499942 1.0724951509413145 1.0 20.385905584110457 -6.003973050993019 24.997117066682332 1.0676197382708112 1.3544648815161016 0.3935142459102986 0.1690329500180618 192.0027074846358 1208028.309937731 0.05716617834800667 0.0633880625123489 9.908934302824954e-07 6.003973050993019 0.2868451432452903 KS(ph)FVESVEEIPFADDVEDTYDDKTEDSSLQEK ddPTM_KYSE-520_SHP099_60min_R1 1 KSFVESVEEIPFADDVEDTYDDKTEDSSLQEK 32 2 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 KS(0.998)FVES(0.002)VEEIPFADDVEDTYDDKTEDSSLQEK 128.5 4.7141e-05 44660000.0 98640.0 108940.0 107240.0 124350.0 111720.0 94246.0 101890.0 127150.0 143030.0 127060.0 True False 93168.2425660351 103706.35887772628 114152.86199006681 136168.1866128091 120511.72840015324 93657.77575522149 112190.03555057244 126708.94632703305 117059.3574928838 125934.34725118417 0.7398159803076204 0.8234954255242001 0.9064474028072864 1.0812632898411176 0.9569409063580155 0.743703189793131 0.8908612939947367 1.0061508166179944 0.9295268530625833 1.0 16.942312290860414 -4.622056567214149 2.65274788096182 0.9375318265453088 0.7491637558617302 0.3832508539958678 0.08373754553831009 0.3358275330430557 4.447934586313198 0.024387931631567026 0.09798436295644772 2.3875002887799582e-05 4.622056567214149 -0.18836807068357853 KS(ph)GSELPSILPEIWPK ddPTM_KYSE-520_SHP099_60min_R1 4 KSGSELPSILPEIWPK 16 1 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 KS(0.765)GS(0.217)ELPS(0.018)ILPEIWPK;KS(0.676)GS(0.323)ELPS(0.001)ILPEIWPK;KS(0.836)GS(0.164)ELPSILPEIWPK;KS(0.546)GS(0.454)ELPSILPEIWPK 184.35 3.2458e-12 846644000.0 1006493.0 973356.0 944600.0 917152.0 921763.0 847389.0 913681.0 939020.0 1126971.0 867447.0 True False 950660.8268959469 926594.5167228571 1005490.4274134373 1004317.8503281974 994300.5039859514 842100.1309280104 1006044.7921472448 935762.7587889162 922341.4750270068 859762.0944435534 1.1057254478184737 1.0777336227210137 1.1694984390585408 1.1681346000467745 1.1564832997545358 0.9794571502632087 1.1701432275847972 1.0883973192544052 1.0727868569548364 1.0 19.713577980008314 KS(ph)HEAEVLK ddPTM_KYSE-520_SHP099_60min_R1 7 KSHEAEVLK 9 1 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 KS(1)HEAEVLK;KS(1)HEAEVLK;KS(1)HEAEVLK;KS(1)HEAEVLK;KS(1)HEAEVLK;KS(1)HEAEVLK;KS(1)HEAEVLK 130.2 0.00037631 11213640000.0 10898180.0 9688930.0 9094790.0 11303500.0 10605770.0 10858020.0 11352280.0 12565350.0 11674740.0 11031270.0 True False 10293636.230416771 9223459.259419573 9681054.715578504 12377781.24147879 11440383.760423318 10790251.069601988 12499879.24997599 12521763.73362475 9554901.512245473 10933541.529998185 0.9414731907474155 0.8435930145884857 0.8854454605597598 1.1320925802054227 1.0463566383348448 0.9868944147691713 1.1432598683308852 1.1452614598178446 0.8739072775303263 1.0 23.38225745041631 -5.243544585905554 24.12718997570108 1.054378709291362 0.8855127553570334 0.43168942034390645 0.08199590854346002 459.86837585654933 620029.1536621288 0.021920647206361037 0.03784415744835572 5.7076247706623375e-06 5.243544585905554 -0.16886595393432846 KS(ph)IDPALSMLIK ddPTM_KYSE-520_SHP099_60min_R1 2 KSIDPALSMLIK 12 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 KS(1)IDPALSMLIK;KS(1)IDPALSMLIK 136.34 2.7705e-05 133940000.0 314920.0 295030.0 356160.0 303340.0 313910.0 274980.0 289250.0 271800.0 345280.0 302620.0 True False 297450.7598225443 280856.31595094147 379118.64347614866 332169.34239750315 338612.93109642086 273263.74782134785 318490.2128079606 270857.1892385969 282585.8558004821 299939.0222347972 0.991704105742183 0.9363780473055038 1.2639857283370364 1.1074562420140035 1.1289392376272704 0.9110643416295213 1.0618498734674184 0.9030408488381529 0.942144352191924 1.0 18.19430970428708 -6.258028596835196 24.98667021621371 0.9636993100221839 1.0885116735859652 0.30913998145839827 0.09119570106214009 395.88966242602646 2900208.3854744164 0.03226408852683532 0.03103456949623523 5.520410880296288e-07 6.258028596835196 0.12481236356378134 KS(ph)KS(ph)PPKVPIVIQDDSLPAGPPPQIR ddPTM_KYSE-520_SHP099_60min_R1 2 KSKSPPKVPIVIQDDSLPAGPPPQIR 26 3 Q7Z422-4;Q7Z422-5;Q7Z422 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 2 KS(0.997)KS(0.997)PPKVPIVIQDDS(0.007)LPAGPPPQIR;KS(1)KS(1)PPKVPIVIQDDSLPAGPPPQIR 172.03 5.4386e-10 4718410000.0 1383410.0 1230700.0 1316210.0 1222670.0 1408870.0 1130330.0 1314660.0 1345430.0 1528170.0 1254440.0 True False 1306669.4895405353 1171575.3246816385 1401055.0026104588 1338872.1891908592 1519740.0536262426 1123275.1911953755 1447558.6626451625 1340763.0173557235 1250692.8500307638 1243326.6375395516 1.0509462679303119 0.9422908584988547 1.1268599580421115 1.0768467020383194 1.2223176177047828 0.9034433569429923 1.1642625670031252 1.078367483551218 1.0059245995933854 1.0 20.245773929634876 -4.76371028370722 24.996229678614736 1.077832304106552 0.9966185700525345 0.10210995649511834 0.08848405087991265 113.76720891512832 1252323.3883980976 0.02191702560198608 0.0494631388793102 1.7230176105589885e-05 4.76371028370722 -0.08121373405401755 KS(ph)KS(ph)PTLR ddPTM_KYSE-520_SHP099_60min_R1 3 KSKSPTLR 8 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 KS(0.961)KS(0.926)PT(0.114)LR;KS(0.996)KS(0.937)PT(0.067)LR;KS(0.993)KS(0.994)PT(0.013)LR 75.819 0.012556 31098800000.0 18842200.0 15407700.0 14885500.0 17048400.0 15592400.0 15997100.0 16655600.0 15521300.0 18631000.0 15613100.0 True False 17796985.60500553 14667490.964570811 15845043.147642082 18668674.810211655 16819433.1713798 15897256.165077044 18339310.590991437 15467460.232998645 15248080.049289778 15474780.08080798 1.1500638789095023 0.9478319490150054 1.0239268710056375 1.2063935456740211 1.0868931954800105 1.0273009426992132 1.185109610296568 0.9995269821108208 0.9853503552015348 1.0 23.88341557099633 -7.478810353451435 24.671851864435396 0.9925961839542935 1.0842694182092294 0.25319560565563937 0.07418084243775201 554.9206779195496 310675.4433818672 0.04143218630650203 0.019901324968647643 3.320394199820165e-08 7.478810353451435 0.0916732342549359 KS(ph)KSPPKVPIVIQDDSLPAGPPPQIR ddPTM_KYSE-520_SHP099_60min_R1 1 KSKSPPKVPIVIQDDSLPAGPPPQIR 26 3 Q7Z422-4;Q7Z422-5;Q7Z422 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 KS(0.487)KS(0.487)PPKVPIVIQDDS(0.026)LPAGPPPQIR 50.538999999999994 0.046061000000000005 1040600000.0 1774900.0 1939500.0 1884500.0 1235100.0 1169900.0 1702400.0 1265900.0 1337500.0 2311800.0 1428500.0 True False 1676442.7588245678 1846323.5087511467 2005977.8853066117 1352483.5326536458 1261964.4741795503 1691774.6901267837 1393869.5259934228 1332860.5246748468 1892035.3957355036 1415844.6013561836 1.1840584462579913 1.3040438950592628 1.4168065361023108 0.9552485713178928 0.8913156662608047 1.19488726976555 0.9844791756512602 0.9413889938190607 1.3363298443368679 1.0 20.433231497770723 -5.265645625849452 24.98603739388504 1.0384591505314356 1.3018770546388283 0.43367785042240026 0.135159981938371 321.5923677139342 1910332.8664230793 0.03749376484729012 0.057956407331052666 5.424433309511229e-06 5.265645625849452 0.26341790410739274 KS(ph)KSPT(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 2 KSKSPTLR 8 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 KS(0.991)KS(0.325)PT(0.684)LR;KS(0.903)KS(0.098)PT(0.999)LR 88.021 0.013064 3354310000.0 7448400.0 6145000.0 5935400.0 6672100.0 6448600.0 6397400.0 6618900.0 6120200.0 7442500.0 6212700.0 True False 7035222.403982722 5849784.976166959 6318005.380975774 7306214.377959986 6956068.132485042 6357471.453604958 7288003.006238927 6098970.454665413 6091129.610157232 6157660.311407452 1.142515508845061 0.9500012472805401 1.026039934237891 1.1865244278617912 1.1296609070166617 1.0324491985742283 1.1835669130265993 0.9904688057193878 0.9891954577086741 1.0 22.553950852334545 -7.350137020269156 24.99995410055971 0.992373001765764 1.0875761650858446 0.29424415461629894 0.07044068345858559 103.0173772332172 29032.897891709832 0.0399482719744389 0.01919052937792803 4.465426853365279e-08 7.350137020269156 0.09520316332008061 KS(ph)LPEEDVAEIQHAEEFLIKPESK ddPTM_KYSE-520_SHP099_60min_R1 6 KSLPEEDVAEIQHAEEFLIKPESK 24 2 O60832;H7C2Q9;H7C0M1;C9IYT0;O60832-2 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 KS(1)LPEEDVAEIQHAEEFLIKPESK;KS(1)LPEEDVAEIQHAEEFLIKPESK;KS(1)LPEEDVAEIQHAEEFLIKPESK;KS(1)LPEEDVAEIQHAEEFLIKPESK;KS(1)LPEEDVAEIQHAEEFLIKPESK;KS(1)LPEEDVAEIQHAEEFLIKPESK 292.78 1.0799e-48 6616537000.0 2180642.0 2019804.0 2121382.0 2105339.0 1867835.0 1725905.0 1800267.0 2119250.0 2367909.0 1884560.0 True False 2059677.4412579443 1922769.5840523876 2258129.6780512095 2305429.7855667463 2014822.9879726118 1715132.9867030447 1982255.5572727723 2111898.8163866657 1937956.4157282875 1867864.2645654937 1.1026911753339157 1.0293947052408898 1.2089367096363932 1.234259806401425 1.0786774104494707 0.9182321324092693 1.0612417587708862 1.1306489751159408 1.0375252915816657 1.0 20.832958189279008 -5.993355709015003 24.75084257656567 1.0350969268866956 1.1423197548874973 0.3573056733614167 0.07205699165443889 193.26087512034488 719913.0887606498 0.024305911506148015 0.02749598414442448 1.0154166748777307e-06 5.993355709015003 0.10722282800080163 KS(ph)LS(ph)DSESDDSK ddPTM_KYSE-520_SHP099_60min_R1 2 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 KS(0.996)LS(0.95)DS(0.047)ES(0.004)DDS(0.003)K;KS(0.967)LS(0.836)DS(0.19)ES(0.003)DDS(0.005)K 140.96 3.8669e-05 3364600000.0 3638400.0 3479760.0 3293530.0 3434300.0 3239730.0 3355860.0 3311710.0 3309360.0 3933400.0 3360710.0 True False 3436570.6990294205 3312587.106373751 3505836.2136343177 3760694.8394400524 3494678.3194578295 3334914.832946939 3646489.965974942 3297880.602570431 3219193.712944899 3330936.7239928176 1.0317129936079898 0.9944911539487095 1.0525075989530797 1.1290201979376182 1.0491578222683058 1.0011942913611858 1.0947340847723666 0.9900760284083805 0.9664529769529903 1.0 21.6674965174977 -7.402964954667335 7.400070084890856 0.9816880949661504 1.0493274212972754 0.37702599094787725 0.03825079679084781 0.29291441628788295 16.436566900004635 0.022385403368850854 0.010636344309276999 3.953985254096907e-08 7.402964954667335 0.06763932633112502 KS(ph)LS(ph)PGVSR ddPTM_KYSE-520_SHP099_60min_R1 2 KSLSPGVSR 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 KS(0.987)LS(0.989)PGVS(0.023)R;KS(0.968)LS(0.919)PGVS(0.113)R 86.803 0.0052395 893930000.0 3379800.0 2984100.0 2840700.0 2645100.0 2839500.0 2769300.0 2931700.0 2939900.0 3548400.0 2871900.0 True False 3192315.7565357336 2840739.3567745783 3023816.067280707 2896489.508721683 3062952.495455023 2752015.7714803237 3228064.846634743 2929702.173077821 2904100.0078847012 2846457.2003043904 1.1215049206411247 0.9979912420502228 1.0623086364893701 1.0175770457437205 1.0760578079752898 0.9668214126620391 1.1340640731536538 1.029245116618837 1.020250719938507 1.0 21.440735976668613 -7.306902589559763 0.005557356780604675 1.613617253130471e-07 2.073235843796216 0.09911184867002043 0.049274210565739655 9726.769248046423 53.4086594690303 9944.541598705071 9975.256158264063 4.932844331878146e-08 7.306902589559763 2.0732356824344906 KS(ph)LSDS(ph)ESDDSK ddPTM_KYSE-520_SHP099_60min_R1 1 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 KS(0.6)LS(0.402)DS(0.997)ES(0.001)DDSK 133.9 6.9599e-05 0.0 575590.0 510250.0 503810.0 491020.0 527240.0 543670.0 518800.0 531000.0 638020.0 530680.0 True False 543660.8752897822 485736.824099136 536286.3987245011 537686.3931694534 568730.7884147587 540276.753865853 571245.3670000688 529158.0849363314 522171.65117534634 525978.5880627919 1.0336178841274037 0.9234916308820317 1.019597395969432 1.022259090716567 1.0812812561618252 1.027183931299793 1.086062018425497 1.0060449169333106 0.9927621827697081 1.0 19.004644544820582 -4.981103824645066 24.711290019863277 1.0342003440693335 0.9768021549221161 0.21881283805791496 0.03853261088019966 266.21197433970536 348131.0296160902 0.00983971648592271 0.020476776957237507 1.044470492949604e-05 4.981103824645066 -0.05739818914721739 KS(ph)LSDSESDDS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 KS(0.875)LS(0.327)DS(0.032)ES(0.024)DDS(0.742)K 136.36 6.2106e-05 0.0 905420.0 840090.0 804090.0 812160.0 769550.0 765290.0 820550.0 848400.0 936990.0 713970.0 True False 855194.5476899771 799730.8153992012 855922.9279894894 889347.4422151918 830109.2068594513 760513.5412400885 903499.2017962734 845457.098418048 766856.2355957298 707644.7812602549 1.2085082379424161 1.1301303091290364 1.2095375400990929 1.2567710039934725 1.1730591800325265 1.0747108738450368 1.2767693986059199 1.1947478746502747 1.0836739786733456 1.0 19.432665822151247 -7.950295925518971 3.2253860792770106 1.0013579497038994 1.1897547007626603 0.5624649264962849 0.05485391578232695 0.16131509166633362 3.638646616626749 0.053655403342633086 0.014327885162078368 1.1212541784246375e-08 7.950295925518971 0.18839675105876097 KS(ph)LSDSESDDSK ddPTM_KYSE-520_SHP099_60min_R1 3 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KS(0.982)LS(0.018)DSESDDSK;KS(0.993)LS(0.007)DSESDDSK;KS(0.735)LS(0.217)DS(0.048)ESDDSK 137.81 2.6048000000000002e-05 29875100000.0 7490300.0 6662600.0 6270800.0 6521400.0 7282700.0 7008700.0 6911800.0 6992100.0 8394600.0 7278100.0 True False 7074798.127457135 6342518.695233514 6675025.801634742 7141191.89526959 7855807.057105227 6964956.103554736 7610512.19666746 6967846.037068402 6870352.250645062 7213621.696276113 0.9807553577573048 0.8792419345344532 0.9253362711106113 0.9899593014360715 1.0890239865448765 0.9655283291540301 1.0550195889252458 0.9659289508715729 0.9524137167037388 1.0 22.7822923352252 -5.30257611150639 4.738377439551614 1.0061096554856055 0.9230743379853954 0.35671908286681764 0.04559812642689748 0.20433755624517502 10.996117802721537 0.012905166522826535 0.020136209641951244 4.982231331105812e-06 5.30257611150639 -0.08303531750021009 KS(ph)LSPGVS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 KSLSPGVSR 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 KS(0.938)LS(0.073)PGVS(0.989)R;KS(0.619)LS(0.467)PGVS(0.914)R;KS(0.874)LS(0.453)PGVS(0.673)R 97.273 0.0033183 2068960000.0 5678100.0 4728000.0 4696400.0 4786700.0 4890300.0 4716400.0 4885900.0 4777500.0 5772500.0 4871900.0 True False 5363124.473988275 4500859.783127319 4999137.458505686 5241626.52882617 5275138.78799919 4686963.198140254 5379814.4537888225 4760927.967576885 4724359.512883121 4828738.756280851 1.1106677632978874 0.9320984236873341 1.0352884491842087 1.0855063388981785 1.092446507100368 0.970639215477088 1.1141241482138944 0.9859568321819516 0.9783837460119454 1.0 22.203214982469603 -7.411412708766135 22.608087380572734 0.9865855292098081 1.0442289197737409 0.19278837747161282 0.05625363059999392 19.36222538440428 3891.9431669727187 0.03020287582290217 0.014508965540322941 3.8778168304876406e-08 7.411412708766135 0.05764339056393275 KS(ph)LSPGVSR ddPTM_KYSE-520_SHP099_60min_R1 1 KSLSPGVSR 9 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KS(0.654)LS(0.342)PGVS(0.004)R 54.7 0.061075 864530000.0 1660600.0 1667000.0 1772600.0 1236700.0 1387800.0 1477000.0 1226800.0 1230400.0 2133400.0 1510100.0 True False 1568483.2076759716 1586914.817781986 1886864.6322602774 1354235.5961725884 1497011.964498145 1467781.4951346684 1350816.9164141964 1226132.0295775195 1746028.3386374763 1496721.6888400232 1.0479458000582356 1.0602604543078837 1.2606649895763984 0.9048012107195004 1.000193940971315 0.9806642785220919 0.9025170988609748 0.8192117737852694 1.1665684753928225 1.0 20.513374550601206 -5.283857867045134 24.994817127339175 0.9593523897118742 1.1166874508161824 0.33072906640529875 0.10059692388616957 858.4816512018274 957136.1102492319 0.027813473742599064 0.04128909293159926 5.201662051501418e-06 5.283857867045134 0.15733506110430817 KS(ph)MSEDGGLQESNPCADDFVSASTADVSHTNLGTIR ddPTM_KYSE-520_SHP099_60min_R1 1 KSMSEDGGLQESNPCADDFVSASTADVSHTNLGTIR 36 1 A0A1W2PRP5;H7C0I1;B8ZZW5;Q8NBF6-2;Q8NBF6 A0A1W2PRP5 AVL9 Late secretory pathway protein AVL9 homolog 1 KS(0.5)MS(0.5)EDGGLQES(0.001)NPCADDFVSASTADVSHTNLGTIR 53.123000000000005 0.041111 226970000.0 79439.0 65393.0 62935.0 80466.0 84735.0 75336.0 77185.0 80046.0 85893.0 104860.0 True False 75032.36031227952 62251.42212310585 66991.89079956037 88113.46444701495 91403.16242380042 74865.80007952962 84987.61305300766 79768.33910887687 70296.99638632654 103931.02197984539 0.7219438323894286 0.598968632629994 0.6445803141679067 0.8478071587143844 0.87945986369234 0.7203412287627444 0.8177309472573907 0.7675123133528484 0.6763812675676252 1.0 16.66526681757598 -13.999999999999998 0.1223129284369657 1.751468209068607 0.634775928920448 0.4440865406781116 0.08555780377229849 159.8239196448918 1.2576704709313606 30.39309292486691 0.8569462866462313 1.0000000000000041e-14 13.999999999999998 -1.116692280148159 KS(ph)PAKS(ph)PNPS(ph)TPR ddPTM_KYSE-520_SHP099_60min_R1 1 KSPAKSPNPSTPR 13 2 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 3 KS(0.993)PAKS(0.911)PNPS(0.939)T(0.157)PR 49.356 0.048253 289540000.0 548180.0 531240.0 503840.0 501260.0 485220.0 464870.0 491450.0 512580.0 593060.0 470880.0 True False 517771.36263026216 505718.43299250334 536318.3325725028 548899.5996906853 523404.0534758539 461968.57389522885 541130.5620897912 510801.9796170716 485375.25382597867 466708.36953909637 1.109410922160221 1.083585523636381 1.1491508778857997 1.1761083269896313 1.1214798954489462 0.9898442026044051 1.1594618768551148 1.094477864456385 1.0399968920748455 1.0 18.83216181400002 -6.031506146671039 24.919885123726793 1.0675892339860096 1.1303182388778303 0.32147464517542657 0.050606299777132775 904.4725737372719 715393.3196088016 0.0169094736235054 0.016926309154350814 9.300233518235189e-07 6.031506146671039 0.06272900489182076 KS(ph)PAKS(ph)PNPST(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 KSPAKSPNPSTPR 13 2 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 3 KS(0.999)PAKS(0.999)PNPS(0.187)T(0.815)PR;KS(1)PAKS(1)PNPS(0.241)T(0.759)PR;KS(1)PAKS(0.997)PNPS(0.114)T(0.888)PR;KS(1)PAKS(1)PNPS(0.071)T(0.929)PR;KS(1)PAKS(0.997)PNPS(0.255)T(0.748)PR 112.56 0.00034213 7138090000.0 7550610.0 6838120.0 6601880.0 6484330.0 6237250.0 6029390.0 6165210.0 6666070.0 8115680.0 6463240.0 True False 7131762.611532137 6509606.450972624 7027447.748181482 7100598.773615095 6728086.089902042 5991758.34052134 6788449.593451222 6642946.95904244 6642077.09164404 6405980.721924635 1.1132975450774454 1.0161764035120069 1.097013564859766 1.1084327415025013 1.0502819758534385 0.9353381785890165 1.059704967612153 1.0369914065315218 1.0368556166445146 1.0 22.610988025815544 -6.002582079244381 24.9413230600032 1.0160548359724755 1.0797915998064902 0.4057466577201251 0.03979413981839154 113.91367491864422 1100356.4447130323 0.01254220135682153 0.013981287141970831 9.94072182078355e-07 6.002582079244381 0.06373676383401472 KS(ph)PAKSPNPSTPR ddPTM_KYSE-520_SHP099_60min_R1 2 KSPAKSPNPSTPR 13 2 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KS(0.635)PAKS(0.364)PNPST(0.001)PR;KS(0.995)PAKS(0.005)PNPSTPR 64.275 0.01933 3904520000.0 802370.0 748970.0 759470.0 555100.0 699860.0 698350.0 587910.0 614760.0 889570.0 681890.0 True False 757860.9366150595 712988.3569731097 808426.6513949647 607856.5371030997 754935.00034131 693991.3386102201 647341.6802486706 612627.5410460619 728046.5122348081 675848.9851023926 1.1213465630938868 1.0549521752482773 1.1961646302871731 0.8993969814292289 1.117017287858967 1.0268437978124343 0.9578200078980617 0.9064562565751985 1.077232530170194 1.0 19.36634139434243 -5.445065622489754 0.7803465162482732 0.9857150648887447 1.1231305080212335 0.24253592866234963 0.08000025651068311 1.164628739984606 1.374123091542498 0.03972854680197697 0.10541901298663144 3.5886770514733067e-06 5.445065622489754 0.13741544313248877 KS(ph)PCPPT(ph)GGTHDQSSK ddPTM_KYSE-520_SHP099_60min_R1 1 KSPCPPTGGTHDQSSK 16 1 Q9ULL8-2;Q9ULL8 Q9ULL8-2 SHROOM4 Protein Shroom4 2 KS(0.954)PCPPT(0.595)GGT(0.44)HDQS(0.008)S(0.003)K 47.32 0.060573 513500000.0 286620.0 309310.0 306050.0 256960.0 390740.0 450270.0 429030.0 635690.0 666520.0 497360.0 True False 270720.6172371953 294450.2833162244 325778.47269731364 281381.40114215907 421489.014993518 447459.69791082403 472400.53932929825 633484.9397611611 545496.769601881 492953.77734022494 0.5491805310791855 0.5973182412861436 0.6608702228737952 0.5708068668433315 0.8550274576811212 0.9077112672208981 0.9583059528992283 1.2850797962826948 1.1065880710868194 1.0 18.911092850597072 -6.2813060434983194 1.0092013920683438 1.1380431790363423 0.5806209051314597 0.858702478145836 0.08901418853361705 0.1770653474933687 0.38011639305483 0.05069455571463611 0.04517396143644539 5.232315899440775e-07 6.2813060434983194 -0.5574222739048826 KS(ph)PEIHR ddPTM_KYSE-520_SHP099_60min_R1 6 KSPEIHR 7 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KS(1)PEIHR;KS(1)PEIHR;KS(1)PEIHR;KS(1)PEIHR;KS(1)PEIHR;KS(1)PEIHR 113.69 0.001848 86229400000.0 11766700.0 9000450.0 8615160.0 10057530.0 10309890.0 9801770.0 10204000.0 10798480.0 10475990.0 9653320.0 True False 11113977.694665082 8568054.872049132 9170506.998343369 11013394.627293352 11121219.687750233 9740593.51764804 11235519.90144314 10761022.59326417 8573814.294217126 9567799.094969314 1.1616023271756133 0.8955094883372039 0.9584761246884 1.1510896621025544 1.162359240339578 1.0180599969714643 1.1743055837523495 1.1247124324466893 0.8961114472737186 1.0 23.189755665409677 -3.931271799400561 20.69847370132739 1.0525878271275977 4.046206439192348 0.10257287580619534 0.10185414611562797 1266.240944922638 396855.8000579079 0.025480386880413482 7079.537258183 0.00011714619868508934 3.931271799400561 2.9936186120647506 KS(ph)PEIHRR ddPTM_KYSE-520_SHP099_60min_R1 7 KSPEIHRR 8 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 KS(1)PEIHRR;KS(1)PEIHRR;KS(1)PEIHRR;KS(1)PEIHRR;KS(1)PEIHRR;KS(1)PEIHRR;KS(1)PEIHRR 99.522 0.001744 16011310000.0 6222400.0 5759950.0 4340290.0 4021700.0 5568500.0 5229980.0 4013670.0 4126310.0 6123420.0 3498570.0 True False 5877231.0679531265 5483233.356138783 4620072.038109538 4403921.158831809 6006709.269569044 5197337.754857416 4419410.933244345 4111996.793697992 5011561.286856431 3467575.3916462744 1.6949108250427507 1.5812874232953735 1.3323638324460774 1.2700289572481342 1.7322505183419485 1.4988391506579228 1.27449599045233 1.1858420738606552 1.4452638287057198 1.0 21.7254958191324 -11.197337803454241 0.07956446056393943 4.7146158117252185e-11 1.999917376897217 0.5107369983401966 0.1540596362717006 115.70119587103338 1.222137907091286 28.667353957264126 7.436484579833975 6.3483695012477705e-12 11.197337803454241 1.9999173768500709 KS(ph)PGADVTCSLPR ddPTM_KYSE-520_SHP099_60min_R1 8 KSPGADVTCSLPR 13 1 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 KS(1)PGADVTCSLPR;KS(0.994)PGADVT(0.006)CSLPR;KS(0.985)PGADVT(0.014)CSLPR;KS(1)PGADVTCSLPR;KS(0.971)PGADVT(0.028)CS(0.001)LPR;KS(1)PGADVTCSLPR;KS(0.65)PGADVT(0.111)CS(0.239)LPR;KS(1)PGADVTCSLPR 138.68 1.376e-05 8709770000.0 8222470.0 7935650.0 8000260.0 7346890.0 7685040.0 8505540.0 7446260.0 8490000.0 10091650.0 9316590.0 True False 7766353.198012419 7554409.462346514 8515969.56046859 8045136.216676983 8289808.926103782 8452453.769890126 8199000.629294406 8460550.171580903 8259260.749794178 9234052.26079734 0.8410557985451353 0.8181033904711956 0.9222353653577063 0.8712465545416247 0.8977433408404789 0.9153569344386919 0.8879092729529819 0.9162337327783711 0.8944351316765244 1.0 23.13853246677316 -13.220511350592833 0.01678508661872729 2.05841639664886 7.659665959283403e-07 0.6959388274012981 0.02589722466125978 2319.049706373241 3.341401580107033 255.65025801760845 163.45652673052913 6.018505329055211e-14 13.220511350592833 -2.058415630682264 KS(ph)PGDEDDKDCK ddPTM_KYSE-520_SHP099_60min_R1 1 KSPGDEDDKDCK 12 2 Q9Y3E1;H3BPM9 Q9Y3E1 HDGFRP3 Hepatoma-derived growth factor-related protein 3 1 KS(1)PGDEDDKDCK 82.34899999999999 0.0037198 0.0 371590.0 308510.0 224530.0 272390.0 317430.0 369210.0 324640.0 324760.0 355030.0 411100.0 True False 350977.1619536995 293688.7165170492 239003.56306070197 298277.86370296037 342409.93507036055 366905.62343850394 357457.7793810764 323633.4833595536 290565.5015779804 407457.97383096063 0.8613824848088678 0.720782842352448 0.5865723053927907 0.7320457147973374 0.8403564467053819 0.9004747655048214 0.8772874807681945 0.7942745120845697 0.7131177206965776 1.0 18.636291738510927 -5.743324494477786 5.0188928277628735 0.848079586429903 0.7133481916869122 0.3149647370950497 0.09269211123664889 0.2349305729479574 15.634110434069633 0.029080459188071887 0.036183164061477674 1.8058243529318567e-06 5.743324494477786 -0.13473139474299078 KS(ph)PGDEDDKDCKEEENK ddPTM_KYSE-520_SHP099_60min_R1 6 KSPGDEDDKDCKEEENK 17 3 Q9Y3E1;H3BPM9 Q9Y3E1 HDGFRP3 Hepatoma-derived growth factor-related protein 3 1 KS(1)PGDEDDKDCKEEENK;KS(1)PGDEDDKDCKEEENK;KS(1)PGDEDDKDCKEEENK;KS(1)PGDEDDKDCKEEENK;KS(1)PGDEDDKDCKEEENK;KS(1)PGDEDDKDCKEEENK 214.92 6.7175999999999996e-18 12013030000.0 6094900.0 5163080.0 4939340.0 5233940.0 5654550.0 5335200.0 5525660.0 6185110.0 6319110.0 5085380.0 True False 5756803.747118068 4915037.886858918 5257737.759623422 5731372.083958561 6099530.915011513 5301901.03780804 6084247.638044727 6163655.297025519 5171718.915799882 5040327.48956577 1.1421487510554642 0.9751425670323565 1.0431341555697966 1.1371031139987144 1.210145754941212 1.0518961414280652 1.207113555744151 1.2228680199421973 1.0260680335764119 1.0 22.265086043569827 -5.261924448654985 22.57927504562442 1.1357336454077367 1.0456418857071823 0.10758493532663527 0.083663279204561 18.21258179876737 847877.1256694049 0.02228664570325301 0.03548375489109746 5.471111319288863e-06 5.261924448654985 -0.09009175970055439 KS(ph)PGVAAAVAEDGGLK ddPTM_KYSE-520_SHP099_60min_R1 2 KSPGVAAAVAEDGGLK 16 1 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 KS(1)PGVAAAVAEDGGLK;KS(1)PGVAAAVAEDGGLK 108.71 0.00022157 611810000.0 505370.0 415890.0 388300.0 431550.0 458490.0 483800.0 459700.0 538270.0 534540.0 499410.0 True False 477336.118669882 395910.020136383 413330.43930196634 472564.3822497609 494570.55454874894 480780.4247435015 506170.9622396524 536402.8670031625 437481.01065682824 494985.61593510024 0.9643434138346106 0.7998414648644911 0.8350352535419129 0.954703262148371 0.9991614677821149 0.9713018101247992 1.022597315850121 1.0836736457277028 0.8838257043699393 1.0 18.91702707615307 -5.43256402551535 3.685913915301351 0.9970706816909793 0.8604468294430655 0.46320923676760106 0.06079755338922082 0.19566428646565806 4.925150949173087 0.017436911216425245 0.026314213774000728 3.6934818948407107e-06 5.43256402551535 -0.13662385224791385 KS(ph)PGVEIK ddPTM_KYSE-520_SHP099_60min_R1 4 KSPGVEIK 8 1 Q9Y597-3;Q9Y597-2;Q9Y597 Q9Y597-3 KCTD3 BTB/POZ domain-containing protein KCTD3 1 KS(1)PGVEIK;KS(1)PGVEIK;KS(1)PGVEIK;KS(1)PGVEIK 93.62299999999999 0.00248 5180630000.0 8673080.0 8060690.0 7531340.0 7385660.0 8041570.0 7714180.0 7828100.0 8534540.0 10808440.0 7693210.0 True False 8191966.96304367 7673442.353057647 8016822.226970053 8087590.905820351 8674395.80872556 7666032.941190218 8619440.742893672 8504935.67271661 8845899.754599627 7625054.144626818 1.0743486941422367 1.0063459494861329 1.05137905579586 1.0606601281014472 1.1376176016845974 1.0053742302396995 1.1304104311138004 1.1153934793643168 1.1601097627396009 1.0 22.862316151333914 -5.534831062313772 24.220164627305724 1.0952805753057988 1.0428838441492185 0.1451468388680509 0.05214656756766196 262.2503342236269 531419.9110093183 0.014987644418165035 0.01936623046704653 2.918562094603739e-06 5.534831062313772 -0.05239673115658028 KS(ph)PHKDLGHR ddPTM_KYSE-520_SHP099_60min_R1 2 KSPHKDLGHR 10 2 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 1 KS(1)PHKDLGHR;KS(1)PHKDLGHR 111.12 0.00040626 2744600000.0 687480.0 672890.0 423470.0 432320.0 707550.0 671390.0 410400.0 471850.0 632120.0 317710.0 True False 649344.1139425964 640563.3543715178 450767.5537759561 473407.5628182524 763230.1595911965 667199.6059705255 451887.23711801926 470213.2624806175 517342.94244845 314895.3365746397 2.0620950472179578 2.0342103549052872 1.4314837389441954 1.5033806723461607 2.4237582172331975 2.1187979892880344 1.4350394706811045 1.4932366658569514 1.6429044268358801 1.0 18.264512866554597 -7.9974880431473165 0.6946371353709451 1.0168020350176814 1.8929777864691362 0.4247950364750429 0.3087164634982745 0.8308907813493683 0.9292247223095702 0.33547389176412173 0.13452835615390304 1.005800753995744e-08 7.9974880431473165 0.8761757514514548 KS(ph)PLPR ddPTM_KYSE-520_SHP099_60min_R1 2 KSPLPR 6 1 A0A087WZV0;O43314-2;O43314;A0A087WWN8;K7ENU7;H0Y9S9;Q9H6P5-2 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 KS(1)PLPR;KS(1)PLPR 63.565 0.0338 858980000.0 1469260.0 1236280.0 1509840.0 1230420.0 1536870.0 1274510.0 1107700.0 1183750.0 1622670.0 1243270.0 True False 1387757.2189028026 1176887.2531058872 1607166.7022294125 1347358.746860738 1657812.9254058679 1266555.31033452 1219677.1261102087 1179643.8475393264 1328034.032181904 1232255.5950494248 1.1261926701555294 0.9550674858641508 1.3042478432933797 1.0934085041072152 1.345348263839187 1.0278349032643017 0.9897923215039558 0.9573045172434472 1.0777261125997464 1.0 20.232870100896704 -6.493285378348989 24.84230851631221 1.0035285699686454 1.1599350816090042 0.3508319721956781 0.10515814883885415 741.9846928492562 622863.9069168088 0.03682313962650384 0.03242202107314926 3.2115495104714723e-07 6.493285378348989 0.1564065116403588 KS(ph)PLSSILFSALDSDTR ddPTM_KYSE-520_SHP099_60min_R1 4 KSPLSSILFSALDSDTR 17 1 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;A0A1W2PRR3;I3L233;A0A1W2PPV8 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 KS(0.922)PLS(0.057)S(0.02)ILFS(0.001)ALDSDTR;KS(1)PLSSILFSALDSDTR;KS(0.994)PLS(0.005)S(0.001)ILFSALDSDTR;KS(0.887)PLS(0.113)SILFSALDSDTR 265.53 9.2802e-30 916268000.0 339477.8 343849.0 410377.0 371246.0 330376.0 312634.0 324788.0 345344.0 444796.0 271453.0 True False 320646.2897017832 327329.9779121283 436830.55804641586 406529.1082208201 356374.7116176963 310682.7352403063 357620.7406654172 344146.0822678953 364032.258794692 269048.13760723843 1.1917803726627862 1.2166223517591146 1.6236148740197167 1.5109902333324416 1.324576021180042 1.1547477637397618 1.3292072706612776 1.2791245660666355 1.3530376460963025 1.0 18.037504794706173 -6.00204573760382 24.922894585442332 1.246444845977727 1.394051693651005 0.19913862982099373 0.1507288159524497 147.51065131879787 1797137.5991086732 0.04939997018418013 0.055143208797960475 9.953005920239116e-07 6.00204573760382 0.14760684767327792 KS(ph)PMMPENAENEGDALLQFTAEFSSR ddPTM_KYSE-520_SHP099_60min_R1 4 KSPMMPENAENEGDALLQFTAEFSSR 26 1 B3KT28;Q9UNN5 B3KT28 FAF1 FAS-associated factor 1 1 KS(1)PMMPENAENEGDALLQFTAEFSSR;KS(1)PMMPENAENEGDALLQFTAEFSSR;KS(1)PMMPENAENEGDALLQFTAEFSSR;KS(1)PMMPENAENEGDALLQFTAEFSSR 256.93 3.741e-38 379741000.0 218970.0 225307.0 215794.0 167862.0 204431.0 199212.0 179804.0 195338.0 299018.0 182998.0 True False 206823.29759412713 214482.91352729837 229704.42652260762 183815.55401044933 220518.55664672144 197968.64401406064 197980.34303793465 194660.41807023206 244723.86883036507 181376.7800902898 1.140296445284617 1.1825268560866957 1.2664489159431556 1.013445899298386 1.2158036797044625 1.0914773319689068 1.0915418331904423 1.073237809014636 1.3492568823227589 1.0 17.468630247873318 -5.2397154787322515 24.799152244456682 1.1240146031615852 1.1950343282968916 0.11014709458669936 0.09985416648015202 1808.199755403754 2064166.4599380067 0.02595159366978232 0.04490219449308624 5.75817051369069e-06 5.2397154787322515 0.07101972513530641 KS(ph)PNELVDDLFK ddPTM_KYSE-520_SHP099_60min_R1 10 KSPNELVDDLFK 12 1 F2Z2K0;Q9UNZ2;Q9UNZ2-5;Q9UNZ2-4 F2Z2K0 NSFL1C NSFL1 cofactor p47 1 KS(1)PNELVDDLFK;KS(1)PNELVDDLFK;KS(1)PNELVDDLFK;KS(1)PNELVDDLFK;KS(1)PNELVDDLFK;KS(1)PNELVDDLFK;KS(1)PNELVDDLFK;KS(1)PNELVDDLFK;KS(1)PNELVDDLFK;KS(1)PNELVDDLFK 193.9 4.3343e-08 1632566000.0 2071272.0 1655687.0 1546578.0 1816015.0 1843678.0 1873817.0 1920702.0 2084351.0 1985325.0 1913877.0 True False 1956374.4131816328 1576145.3112831458 1646272.8924922934 1988608.519595181 1988764.969507139 1862121.813045878 2114865.3024051026 2077120.872872183 1624840.0259704927 1896921.5387537736 1.0313417678134005 0.8308964177393604 0.8678655700086839 1.0483346195234007 1.048417095212965 0.9816546309391594 1.1148933992254166 1.0949956708471957 0.8565668072059369 1.0 20.85522857596401 -5.265354491727341 24.801376506359233 1.0281061471306352 0.9021207662295124 0.2695212916832552 0.0825504712966065 352.2489351306748 2231422.2106944937 0.022730965758217907 0.03523001124851376 5.42807085763439e-06 5.265354491727341 -0.12598538090112277 KS(ph)PPEPR ddPTM_KYSE-520_SHP099_60min_R1 1 KSPPEPR 7 1 H7C0R7;Q9UHQ9 H7C0R7 CYB5R1 NADH-cytochrome b5 reductase 1 1 KS(1)PPEPR 81.33800000000001 0.023655000000000002 774910000.0 1941800.0 1583000.0 1544600.0 1588100.0 1677300.0 1614000.0 1674300.0 1593700.0 1800300.0 1637200.0 True False 1834084.483117666 1506950.303868557 1644167.3874473788 1739032.546520325 1809293.9674684654 1603926.4273170976 1843554.5835933224 1588171.8266723775 1473410.9018698097 1622695.6817223274 1.130270144782151 0.9286709275451339 1.0132321210729183 1.0716935813094157 1.1149927788974472 0.9884332875124754 1.136106174656591 0.978724381016836 0.9080019861185142 1.0 20.629961033390074 -7.5063230182232985 24.021126827357385 0.9504550311028279 1.049358946682556 0.29826416385462806 0.06535899768463034 508.19061463497246 737355.421076562 0.036422363466175854 0.016728751384038554 3.1165706884024816e-08 7.5063230182232985 0.098903915579728 KS(ph)PPKADEK ddPTM_KYSE-520_SHP099_60min_R1 5 KSPPKADEK 9 2 E9PG73;Q13427;C9JM79;Q13427-2 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 KS(1)PPKADEK;KS(1)PPKADEK;KS(1)PPKADEK;KS(1)PPKADEK;KS(1)PPKADEK 97.69 0.0021884 56110900000.0 6774360.0 5411710.0 4080890.0 5144140.0 6236480.0 6707870.0 5789860.0 5709060.0 6112900.0 8849550.0 True False 6398572.746448151 5151723.328457686 4343950.699054867 5633037.518957909 6727255.495282741 6666003.695171966 6375155.552388251 5689256.603364625 5002951.453668809 8771149.871845722 0.7295021564945273 0.5873486833230457 0.49525441504521517 0.6422233802023204 0.7669753217735313 0.7599919956411864 0.7268323589876957 0.648632925726924 0.5703871814717986 1.0 23.06433455745203 -5.584313497140285 5.772454633116072 0.7268493334151975 0.5970287309793009 0.22959398288426536 0.11661947659013969 0.31441598417466426 20.6149948403223 0.03418135470403931 0.04460009042570342 2.6042729668809373e-06 5.584313497140285 -0.12982060243589666 KS(ph)PPKADEKER ddPTM_KYSE-520_SHP099_60min_R1 3 KSPPKADEKER 11 3 E9PG73;Q13427;C9JM79;Q13427-2 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 KS(1)PPKADEKER;KS(1)PPKADEKER;KS(1)PPKADEKER 91.20700000000001 0.0017698 17851100000.0 5274600.0 5003500.0 4973100.0 3777960.0 4419770.0 4192340.0 3664430.0 3743190.0 5835800.0 3372650.0 True False 4982007.423345577 4763124.34959338 5293673.983241341 4137016.182514905 4767580.753948668 4166174.050990441 4034866.3457904067 3730205.7475571106 4776165.828546256 3342770.944881993 1.490382531586068 1.4249030005738332 1.583618522036729 1.2376008559153462 1.426236147363957 1.2463235201230685 1.2070424244796247 1.1159022885693997 1.4288043982968341 1.0 21.67261307055396 -1.0000000264065674 0.079212587308218 0.7356155763004218 2.842553502360378 0.5718870729151724 0.11361798239071677 137.79911617705733 0.7983583034050833 3.2415538638870465 31.822139998523117 0.09999999391966334 1.0000000264065674 2.106937926059956 KS(ph)PPPAKDEAR ddPTM_KYSE-520_SHP099_60min_R1 5 KSPPPAKDEAR 11 2 Q8IXJ6-5;Q8IXJ6-2;Q8IXJ6-3;Q8IXJ6 Q8IXJ6-5 SIRT2 NAD-dependent protein deacetylase sirtuin-2 1 KS(1)PPPAKDEAR;KS(1)PPPAKDEAR;KS(1)PPPAKDEAR;KS(1)PPPAKDEAR;KS(1)PPPAKDEAR 100.54 0.00096331 4577530000.0 4530800.0 3759820.0 3579630.0 3477960.0 3748950.0 3706420.0 3560890.0 3892750.0 4565410.0 3573710.0 True False 4279467.492074117 3579192.60359512 3810378.677410503 3808504.272713194 4043971.0363923614 3683286.857953312 3920859.512137392 3879246.9588246774 3736446.6286204807 3542049.709704304 1.2081895633337607 1.010486271208745 1.0757552800490198 1.075226093603055 1.1417036371095872 1.0398744116611505 1.1069464952440522 1.0951983390285402 1.0548826060751149 1.0 21.75615302857398 -13.999999999904576 0.21092559324617977 0.574216030336147 1.0997933593661005 0.23983478208783537 0.0513622850599191 226.4080150044086 2.258202429232643 40.698546065700036 0.10414149176011943 1.0000000002197222e-14 13.999999999904576 0.5255773290299535 KS(ph)PPPSFCLEYTSAIFEFK ddPTM_KYSE-520_SHP099_60min_R1 2 KSPPPSFCLEYTSAIFEFK 19 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 KS(0.987)PPPS(0.013)FCLEYTSAIFEFK;KS(0.961)PPPS(0.039)FCLEYTSAIFEFK 191.09 5.1855e-13 429380000.0 485920.0 557900.0 600300.0 613930.0 542950.0 475820.0 446960.0 565830.0 695470.0 353077.0 True False 458965.0489424949 531097.6465750269 638996.2985139593 672277.7226152145 585677.076037085 472850.23088353296 492143.0787092347 563867.2677957148 569190.1793719913 349949.01246974955 1.3115197717043678 1.517642935543178 1.8259697148572342 1.9210733525739778 1.673606883196198 1.3511975003055832 1.4063279539952318 1.6112840662593864 1.6264946008990195 1.0 18.41678521130704 -6.247945230270538 23.509307938240912 1.4377202785331462 1.667451368624453 0.22728362053021745 0.2245998214592141 632.1614175759759 1101341.394698171 0.07756990058513202 0.077075842714055 5.650082246155766e-07 6.247945230270538 0.22973109009130677 KS(ph)PQVTR ddPTM_KYSE-520_SHP099_60min_R1 1 KSPQVTR 7 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QXV1;M0QX88;M0R200;M0R073;Q8IV63-3 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 KS(0.926)PQVT(0.074)R 51.06399999999999 0.052478 0.0 176800.0 109120.0 119880.0 130510.0 146710.0 152970.0 165930.0 102190.0 149110.0 159980.0 True False 166992.55155793793 103877.71140754076 127607.65661478168 142913.63116073754 158255.24233428657 152015.25748865967 182703.82372074283 101835.52674132523 122035.38275721107 158562.70166255662 1.0531641414216137 0.655120720814955 0.804777260205546 0.901306736466168 0.9980609605850159 0.9587075390035242 1.1522496892715783 0.6422413699663451 0.7696348603905555 1.0 17.274693923569608 -3.9369017535636064 20.269589721155043 0.8768213009159929 4.4054710211871715 0.10795571685010996 0.15293655701401382 838.0152595336826 283975.72454818623 0.038597501805668046 7194.858754001734 0.00011563738083898951 3.9369017535636064 3.5286497202711784 KS(ph)PRPAGPQLFLPDPDPQR ddPTM_KYSE-520_SHP099_60min_R1 1 KSPRPAGPQLFLPDPDPQR 19 2 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 KS(1)PRPAGPQLFLPDPDPQR 81.315 0.0033344 3997700000.0 1398500.0 1256700.0 1213500.0 1012900.0 1287600.0 1032300.0 1029100.0 1147000.0 1612300.0 1282800.0 True False 1320922.4171593655 1196326.2456548437 1291724.151668651 1109165.7114605093 1388926.7945581574 1025857.0327877575 1133131.4710481318 1143021.3247118117 1319546.9627754784 1271435.3900032977 1.0389221721726178 0.9409257088964158 1.0159573674170739 0.8723728473985867 1.0924084742949896 0.8068495189402403 0.8912222201437958 0.8990007150177305 1.037840359919552 1.0 20.278026720388635 -6.259782134344723 24.999561213142925 0.9184350908097776 0.9839453069455741 0.13298557916671938 0.08036829114043183 314.56482107642256 4745246.37324961 0.026446310617290945 0.025143832804045117 5.498166225100792e-07 6.259782134344723 0.06551021613579655 KS(ph)PS(ph)PAGGGS(ph)SPYSR ddPTM_KYSE-520_SHP099_60min_R1 2 KSPSPAGGGSSPYSR 15 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 3 KS(0.997)PS(0.987)PAGGGS(0.569)S(0.445)PY(0.001)SR;KS(0.989)PS(0.998)PAGGGS(0.546)S(0.22)PY(0.001)S(0.246)R 111.31 0.00018595 0.0 1072250.0 908140.0 892670.0 931640.0 911920.0 936500.0 907730.0 1061580.0 1155960.0 846800.0 True False 1012770.1550226178 864511.5912540705 950212.9365224994 1020182.7854922201 983682.9158849599 930654.956122964 999492.2069910808 1057897.626754634 946066.803380228 839298.0108004318 1.2066871861840194 1.0300412727412431 1.1321520178706117 1.2155191271325425 1.1720305579502437 1.1088492337011568 1.1908668841450882 1.2604553009076305 1.127212016716174 1.0 19.67882363595458 -5.006457940133765 24.804503078506762 1.1655643287801805 1.109047343854862 0.014947120566272676 0.07749603654097836 657.4127856490262 2525115.068887721 0.01946729667459946 0.038231368996486395 9.852400551569623e-06 5.006457940133765 -0.056516984925318425 KS(ph)PS(ph)PAGGGSS(ph)PYSR ddPTM_KYSE-520_SHP099_60min_R1 1 KSPSPAGGGSSPYSR 15 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 3 KS(0.852)PS(0.923)PAGGGS(0.273)S(0.845)PY(0.001)S(0.106)R 131.9 0.00094305 0.0 397970.0 364740.0 346970.0 357450.0 344830.0 344720.0 350960.0 389690.0 418510.0 334020.0 True False 375893.81076647365 347217.342914098 369336.24137162836 391421.9405287387 371966.1591856863 342568.4746126082 386438.46183952276 388338.25634433003 342519.13377855567 331060.842663628 1.1354221409639733 1.0488022084414426 1.115614394019077 1.1823262980286684 1.1235583048509905 1.034759870289681 1.167273238146623 1.173011743762455 1.034610831721255 1.0 18.336736855646617 -7.9287824393138475 5.904866009413688 1.0005483605036678 1.1202097131244155 0.4580656258391542 0.046452420334413366 0.16761276626339291 9.428056666433523 0.04650923395788007 0.012080560351971747 1.1781960453664178e-08 7.9287824393138475 0.11966135262074773 KS(ph)PSDTEGLVK ddPTM_KYSE-520_SHP099_60min_R1 3 KSPSDTEGLVK 11 1 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 KS(0.855)PS(0.126)DT(0.019)EGLVK;KS(0.797)PS(0.177)DT(0.026)EGLVK;KS(0.459)PS(0.459)DT(0.082)EGLVK 112.15 0.00030803 725740000.0 935810.0 1023240.0 784330.0 1187390.0 1185210.0 1236590.0 1129090.0 1269020.0 1577890.0 954620.0 True False 883898.7538090145 974082.0144854471 834889.1667723702 1300239.1885981788 1278479.284077566 1228871.983120229 1243229.4360564912 1264618.0658114937 1291384.951369967 946162.8094831207 0.9341930849003456 1.029507823307469 0.8823948250813851 1.374223522174251 1.3512254669743216 1.2987954829798791 1.313969882979923 1.3365755376734179 1.3648654739192696 1.0 19.851728928851443 -5.262357391406817 24.999998095201892 1.3091471920242839 0.9567794913811847 0.6762694767994111 0.10811910874871758 42.19412080936396 1149073.455269288 0.027730936105511993 0.04396414164848306 5.465659954308966e-06 5.262357391406817 -0.3523677006430992 KS(ph)PSGPVK ddPTM_KYSE-520_SHP099_60min_R1 2 KSPSGPVK 8 1 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 KS(0.955)PS(0.045)GPVK;KS(0.977)PS(0.023)GPVK 91.31299999999999 0.0027363 1636690000.0 1760520.0 1338280.0 1113970.0 1479590.0 1421800.0 1524920.0 1582770.0 1118800.0 1498410.0 1554650.0 True False 1662860.446090388 1273987.020000768 1185778.2886150181 1620209.7887450445 1533687.5710646077 1515402.4086396475 1742771.8379466084 1114919.1439298822 1226336.5158422152 1540877.010499399 1.079164939680328 0.8267934503013112 0.7695476540536528 1.0514854707449584 0.9953341899542903 0.9834674658092958 1.1310259197012584 0.7235614110230228 0.7958691754670018 1.0 20.555320282946045 -7.2788279906320525 24.995967546980335 0.8197864844413634 0.9668109916036516 0.2012458607316422 0.12193305873304765 1337.927994653963 1923248.5432827135 0.06812073905947466 0.032844737516658326 5.262256453171558e-08 7.2788279906320525 0.1470245071622882 KS(ph)PSGPVKSPPLSPVGTTPVK ddPTM_KYSE-520_SHP099_60min_R1 1 KSPSGPVKSPPLSPVGTTPVK 21 2 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 KS(0.333)PS(0.333)GPVKS(0.333)PPLSPVGTTPVK 50.88399999999999 0.04698 838950000.0 1056500.0 1078500.0 870750.0 722500.0 744700.0 874010.0 691900.0 765610.0 1031500.0 833180.0 True False 997893.8389194646 1026687.2411384969 926879.9382492595 791166.1827724543 803303.6532366101 868554.9793924524 761844.0042932692 762954.2776047174 844205.601998949 825798.6734042304 1.2083984523804063 1.2432657912928506 1.122404247064647 0.9580618233630616 0.9727596799412526 1.0517757019540437 0.9225541634169528 0.9238986476686304 1.0222898500415831 1.0 19.65543057535018 -5.057651620077912 2.9584271920825964 0.9759361109564717 1.2246238455271092 0.86566185162626 0.03963884398611335 0.08586339384898706 1.4807440497690065 0.011476303262761783 0.024079772821179533 8.756859464199553e-06 5.057651620077912 0.24868773457063753 KS(ph)PSLESLSRPPSLGFGDTR ddPTM_KYSE-520_SHP099_60min_R1 1 KSPSLESLSRPPSLGFGDTR 20 2 Q5M775-4;Q5M775;J3KSG2 Q5M775-4 SPECC1 Cytospin-B 1 KS(0.451)PS(0.451)LES(0.09)LS(0.009)RPPSLGFGDTR 101.3 0.00057896 351590000.0 561940.0 525560.0 420050.0 462690.0 420430.0 430000.0 423490.0 531920.0 541040.0 429060.0 True False 530768.0680003818 500311.3087183566 447127.09510376333 506663.91848717886 453515.4490805262 427316.2104995986 466300.5020641082 530074.8936710614 442800.77450849384 425258.8622036284 1.248105836642699 1.1764864960739854 1.0514233443291858 1.1914247144944177 1.0664456155727746 1.0048378728318779 1.0965097814724145 1.2464758310368698 1.0412499629377876 1.0 18.697981775755228 -4.534681662846767 3.9961264548082016 1.0965740362678154 1.2377599026556998 0.3233208922704133 0.0745320303526382 0.25079828358082495 8.932065484392531 0.019317904830041283 0.06946020566965387 2.9195662672254402e-05 4.534681662846767 0.14118586638788444 KS(ph)PTSLKR ddPTM_KYSE-520_SHP099_60min_R1 2 KSPTSLKR 8 2 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 KS(0.822)PT(0.141)S(0.038)LKR;KS(0.881)PT(0.118)S(0.002)LKR 71.085 0.016427 1650780000.0 3129400.0 1989050.0 625950.0 4497900.0 746680.0 1645040.0 1554930.0 3979000.0 819840.0 505920.0 True False 2955805.9436957645 1893493.0523750815 666299.7385554112 4925379.063657049 805439.4679719523 1634772.6951633955 1712117.499054389 3965197.7777055767 670977.7224845556 501437.94239980355 5.894659525662816 3.7761264002343338 1.3287780644731528 9.822509720913729 1.6062595186101096 3.2601695183647834 3.414415532379665 7.907654053318663 1.3381072028043215 1.0 18.935711639417995 -7.960917495147032 24.783905211423704 0.9999844482323734 4.483931535238646 0.2302293164946847 2.52172326222864 175.4679988803103 111271.57664959918 2.3463646875961888 0.6058287791768376 1.0941642097669825e-08 7.960917495147032 3.483947087006273 KS(ph)PVFS(ph)DEDS(ph)DLDFDISK ddPTM_KYSE-520_SHP099_60min_R1 8 KSPVFSDEDSDLDFDISK 18 1 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 3 KS(1)PVFS(1)DEDS(1)DLDFDISK;KS(1)PVFS(1)DEDS(1)DLDFDISK;KS(1)PVFS(1)DEDS(1)DLDFDISK;KS(1)PVFS(1)DEDS(1)DLDFDISK;KS(1)PVFS(1)DEDS(1)DLDFDISK;KS(1)PVFS(1)DEDS(1)DLDFDISK;KS(1)PVFS(1)DEDS(1)DLDFDISK;KS(1)PVFS(1)DEDS(1)DLDFDISK 164.22 4.3101e-08 5744290000.0 9375600.0 7871250.0 7164170.0 8453830.0 8440720.0 8481670.0 8548240.0 9359730.0 9409270.0 8642530.0 True False 8855516.778204773 7493103.335012875 7625983.861277294 9257279.46146332 9104956.642872732 8428732.75141427 9412379.521982793 9327263.281207403 7700783.756394237 8565963.907986606 1.0338027189150538 0.8747530827238913 0.8902657007656889 1.0807049341910202 1.0629226016681659 0.9839794846153407 1.0988114849756743 1.0888749218883573 0.8989979223720865 1.0 23.030184167884155 -5.259122174710211 24.999134461480025 1.036560939756808 0.9271217568026502 0.2918536220757254 0.06911026535783561 234.52730167756104 2530177.688996012 0.01875112783557845 0.030627505497286284 5.506527662628899e-06 5.259122174710211 -0.10943918295415789 KS(ph)PVFS(ph)DEDS(ph)DLDFDISKLEQQSK ddPTM_KYSE-520_SHP099_60min_R1 1 KSPVFSDEDSDLDFDISKLEQQSK 24 2 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 3 KS(1)PVFS(1)DEDS(1)DLDFDISKLEQQSK 147.3 2.4926e-06 169090000.0 110660.0 93376.0 94003.0 80600.0 81409.0 86985.0 75967.0 72086.0 120780.0 72940.0 True False 104521.46920475917 88890.07679976657 100062.58379011782 88260.1997667263 87815.4251461517 86442.09434955248 83646.48572647315 71835.95049099882 98849.39661602823 72293.80834646132 1.4457872893325774 1.2295669412485395 1.3841100099551713 1.2208542029456735 1.2147018832554026 1.1957053629722594 1.1570352653937555 0.9936667072058473 1.3673286672394092 1.0 16.14158447139574 -1.000000000001176 0.14753248199041727 1.0021932509534417 2.4286208520078523 0.46772746271667176 0.10418095987767079 60.860899479451724 0.5922086591585001 0.3672030384384436 18.513765678827014 0.09999999999972922 1.000000000001176 1.4264276010544106 KS(ph)PVFS(ph)DEDSDLDFDISK ddPTM_KYSE-520_SHP099_60min_R1 3 KSPVFSDEDSDLDFDISK 18 1 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 2 KS(1)PVFS(1)DEDSDLDFDISK;KS(0.997)PVFS(0.677)DEDS(0.327)DLDFDISK;KS(1)PVFS(1)DEDSDLDFDISK 124.0 3.4124e-05 364718000.0 696740.0 591460.0 518480.0 572360.0 588840.0 617920.0 653540.0 638350.0 712380.0 574380.0 True False 658090.4432832446 563045.3738004407 551902.0503973312 626756.9223136904 635178.3579587028 614063.3320742141 719606.2011357463 636135.7128420095 583029.7496384013 569291.4400608783 1.1559816237758123 0.9890283502949392 0.9694543278892662 1.1009421154245125 1.1157349527173266 1.0786449415233577 1.264038329926046 1.117416613139279 1.024132296062723 1.0 19.11880788178125 -5.4413699412404934 9.361066008124839 1.1125860552705096 1.0332990978924022 0.09681783302615221 0.08106203488273926 0.8133061637098237 88.71565465329903 0.02306790651672213 0.03421406517394653 3.6193456354062703e-06 5.4413699412404934 -0.07928695737810743 KS(ph)PVFS(ph)DEDSDLDFDISKLEQQSK ddPTM_KYSE-520_SHP099_60min_R1 1 KSPVFSDEDSDLDFDISKLEQQSK 24 2 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 2 KS(1)PVFS(0.777)DEDS(0.223)DLDFDISKLEQQSK 100.86 0.0011698000000000001 177130000.0 51706.0 70432.0 51270.0 46412.0 53828.0 46611.0 38128.0 50648.0 70487.0 44001.0 True False 48837.76510664443 67048.3409994127 54574.94623490044 50822.98252572338 58063.957360575056 46320.08345952745 41982.35033342065 50472.313909332064 57688.33763267079 43611.18537226002 1.1198449363338998 1.5374115706118932 1.2513979101704076 1.1653657677933837 1.3314005768233046 1.062114754830546 0.9626509799049068 1.1573249724470052 1.3227876550533957 1.0 15.412410583622714 -6.262210263612998 24.99767766435396 1.102163186135511 1.2872465324916258 0.29653623145758223 0.13853458124895338 93.00162211316663 3015755.555398686 0.04819794196594 0.04505171487253382 5.467511892918564e-07 6.262210263612998 0.1850833463561148 KS(ph)PVFSDEDS(ph)DLDFDISKLEQQSK ddPTM_KYSE-520_SHP099_60min_R1 1 KSPVFSDEDSDLDFDISKLEQQSK 24 2 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 2 KS(0.723)PVFS(0.277)DEDS(0.999)DLDFDISKLEQQSK 164.7 1.6775000000000002e-10 214590000.0 123980.0 146160.0 125190.0 97279.0 120650.0 90838.0 79886.0 97864.0 145270.0 97298.0 True False 117102.58225199748 139138.25420936738 133259.9477110823 106524.36691200211 130144.46859540357 90271.04634735482 87961.65649222727 97524.53262562944 118892.62995868856 96436.01541669863 1.2143034088042617 1.442803848833374 1.3818483388728575 1.1046118657195847 1.349542160499386 0.936071922479324 0.9121245430158662 1.0112874552544227 1.2328654335722522 1.0 16.557284421848998 -6.258124101416311 24.998825597268144 1.012528750121674 1.3004773920573371 0.5838643637674193 0.11819818057259222 218.72749444145916 1649315.7928170483 0.041445904345058786 0.03982194815478944 5.519197034427575e-07 6.258124101416311 0.28794864193566316 KS(ph)REDLSAQPVQTK ddPTM_KYSE-520_SHP099_60min_R1 7 KSREDLSAQPVQTK 14 2 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 KS(0.996)REDLS(0.004)AQPVQTK;KS(1)REDLSAQPVQTK;KS(0.729)REDLS(0.271)AQPVQTK;KS(0.979)REDLS(0.021)AQPVQTK;KS(0.998)REDLS(0.002)AQPVQTK;KS(0.986)REDLS(0.014)AQPVQTK;KS(1)REDLSAQPVQTK 211.13 7.5383e-14 19484230000.0 12391100.0 11176960.0 10258940.0 10080790.0 11197830.0 10925510.0 10844380.0 11553980.0 13354400.0 10163550.0 True False 11703740.981954535 10640002.064641008 10920247.687284367 11038865.250699975 12079035.514062723 10857319.839477835 11940635.761349667 11513901.940099204 10929577.597028386 10073508.854122246 1.161833592588264 1.0562359371220431 1.0840559973117632 1.0958311955205846 1.1990891842140767 1.0778091325183916 1.1853502026221343 1.1429882185875606 1.0849821800231825 1.0 23.26406296172631 -3.9634487745303844 14.942990590346223 1.1112413030404553 1.339765028188168 0.07165291626138603 0.05692207620373046 2550151.214139692 31293492.53969942 0.013770771992261245 15143989.016636686 0.00010878054378064359 3.9634487745303844 0.22852372514771258 KS(ph)RVSVS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 3 KSRVSVSPGR 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KS(0.958)RVS(0.058)VS(0.984)PGR;KS(0.931)RVS(0.069)VS(1)PGR;KS(0.986)RVS(0.014)VS(1)PGR 127.91 0.0020377 6824630000.0 11877400.0 12688700.0 11537900.0 9912210.0 9721250.0 10343620.0 8900850.0 8658440.0 14262200.0 9011370.0 True False 11218536.944990097 12079115.805873008 12281651.49529271 10854263.458185405 10486257.068653677 10279061.630808983 9800634.78192475 8628405.892535087 11672544.000804089 8931536.27253978 1.2560590477006464 1.3524118849531561 1.3750883521632151 1.2152739603775775 1.174070926733391 1.1508727409429218 1.09730672113565 0.9660606674199292 1.3068909585791644 1.0 23.090476917363798 -5.753427577799225 1.392995645501914 1.0982178788484203 1.3309605061808818 0.5236169563720211 0.0915461153501114 0.3196097187855924 1.2955034077043908 0.0339960319954274 0.0478710608614929 1.7642999515718291e-06 5.753427577799225 0.23274262733246154 KS(ph)S(ph)SSSGDPSSDPLGSPTLLAL ddPTM_KYSE-520_SHP099_60min_R1 2 KSSSSSGDPSSDPLGSPTLLAL 22 1 P15407;E9PPX2;P15407-2 P15407 FOSL1 Fos-related antigen 1 2 KS(0.391)S(0.391)S(0.391)S(0.391)S(0.391)GDPS(0.021)S(0.021)DPLGS(0.001)PTLLAL;KS(0.392)S(0.392)S(0.392)S(0.392)S(0.392)GDPS(0.019)S(0.019)DPLGSPTLLAL 57.496 0.027668 41161000.0 78898.0 83187.0 93866.0 112916.0 81701.0 64473.0 61427.0 74005.0 88500.0 49381.0 True False 74521.37066073623 79190.57165376731 99916.75255091024 123647.50269056675 88130.40388489894 64070.600091955 67636.64062974797 73748.29392789688 72430.63090344843 48943.522757836625 1.5225992421807069 1.6179990158368334 2.041470391195166 2.5263302623791795 1.8006551003889046 1.3090720994678768 1.3819324155394654 1.5068039604094217 1.4798818479377058 1.0 15.578830324088049 -6.17236811255303 4.822211759198219 1.370821858135749 1.9386631061123847 0.49736454005206865 0.28459389230118315 0.21955847963775457 8.690429478883328 0.10376551024813668 0.10350042572874847 6.724064758991448e-07 6.17236811255303 0.5678412479766357 KS(ph)SDSKPGVSSK ddPTM_KYSE-520_SHP099_60min_R1 1 KSSDSKPGVSSK 12 2 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 KS(0.492)S(0.492)DS(0.015)KPGVSSK 78.932 0.008884399999999999 1531000000.0 1761800.0 1223000.0 1218800.0 1108000.0 1476500.0 1829700.0 1405100.0 1170300.0 1389300.0 2085900.0 True False 1664069.4419387737 1164245.2442395731 1297365.7981489482 1213303.9868676518 1592692.1498641812 1818280.163607248 1547141.2204545056 1166240.5024500745 1137038.1414029477 2067420.5488056443 0.8049012780201455 0.5631390502102542 0.6275287332799515 0.5868684954150144 0.770376472645725 0.8794921597628864 0.7483437374888695 0.5641041456823168 0.5499791235314065 1.0 20.979400456860233 -5.76776755009228 24.95032410039866 0.7364413510547614 0.6384271734969786 0.1174158665331827 0.13850893474131307 373.2953756252161 1471804.0512101303 0.04407009437749187 0.05118059614314423 1.7069957896123627e-06 5.76776755009228 -0.09801417755778274 KS(ph)SFNVSDVARPEAAGSPPEEGGCTEGTPAK ddPTM_KYSE-520_SHP099_60min_R1 3 KSSFNVSDVARPEAAGSPPEEGGCTEGTPAK 31 2 F5H1R4;K7ES92;K7ES98;K7EM85;Q92619;Q92619-2 F5H1R4;K7ES98 HMHA1 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 1 KS(0.44)S(0.44)FNVS(0.12)DVARPEAAGSPPEEGGCTEGTPAK;KS(0.497)S(0.497)FNVS(0.005)DVARPEAAGSPPEEGGCTEGTPAK;KS(0.438)S(0.438)FNVS(0.123)DVARPEAAGSPPEEGGCTEGTPAK 171.93 1.8872999999999998e-10 8655300000.0 2124140.0 2125390.0 1945280.0 1842960.0 1970370.0 1943620.0 1971950.0 2467650.0 2609510.0 2124830.0 True False 2006309.719831892 2023283.0741245712 2070675.8613580484 2018114.3642938728 2125426.9091282673 1931489.1466307666 2171293.950377381 2459090.2981038415 2135688.7643938726 2106005.659292726 0.9526611246171507 0.9607206254156335 0.9832242625850576 0.9582663538385884 1.009221841237627 0.9171338823844527 1.031001004577823 1.1676560731226593 1.0140945039583205 1.0 21.006077882526636 -6.984968912758391 11.500881549351492 1.0743876493151259 0.9667729518971938 0.45952557088054924 0.04765773736476539 0.352758382537651 265.9757103395931 0.01870808528374781 0.012483919492883138 1.0352162658625757e-07 6.984968912758391 -0.10761469741793206 KS(ph)SGTGTEPVAK ddPTM_KYSE-520_SHP099_60min_R1 2 KSSGTGTEPVAK 12 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9;A0A0U1RR74 Q6ULP2-7 AFTPH Aftiphilin 1 KS(0.693)S(0.305)GT(0.001)GT(0.001)EPVAK;KS(0.635)S(0.363)GT(0.002)GTEPVAK 159.0 2.4656999999999998e-05 3415540000.0 3038610.0 2708600.0 2682930.0 2646660.0 2699510.0 2698740.0 2582260.0 2464530.0 3376230.0 2455000.0 True False 2870052.2459811387 2578474.7903085104 2855875.960639779 2898197.7706526574 2911946.078889166 2681896.162613228 2843300.041228989 2455981.120655625 2763191.739832197 2433250.6099610957 1.1795136243804443 1.0596831989902333 1.1736875556297264 1.191080671587295 1.1967308533565821 1.102186577754976 1.168519193867355 1.0093416233418278 1.1355968548904942 1.0 21.214453486036405 -7.2511216000165115 24.92489804930588 1.0543519284713456 1.151445151837343 0.45338993290217955 0.05255789184373296 636.5734299308941 1537790.447411289 0.024635862490193734 0.014018388347588343 5.608909077394284e-08 7.2511216000165115 0.09709322336599735 KS(ph)SINEQFVDTR ddPTM_KYSE-520_SHP099_60min_R1 4 KSSINEQFVDTR 12 1 E9PGA7;Q9Y2L6-2;Q9Y2L6 E9PGA7 FRMD4B FERM domain-containing protein 4B 1 KS(0.5)S(0.5)INEQFVDTR;KS(0.5)S(0.5)INEQFVDTR;KS(0.5)S(0.5)INEQFVDTR;KS(0.633)S(0.367)INEQFVDTR 142.01 2.1334e-05 1143380000.0 2257860.0 2146020.0 1760000.0 1753210.0 1687850.0 2084060.0 1959850.0 2042120.0 2368740.0 2269960.0 True False 2132612.0048676757 2042921.9779583106 1873452.4160995665 1919834.5512781932 1820674.192447178 2071052.6084971956 2157970.764292763 2035036.3623543917 1938636.5270760925 2249849.9204021576 0.9478907839712589 0.9080258907194757 0.8327010611288639 0.8533167185369527 0.8092425081054896 0.9205292271792946 0.9591620955352563 0.9045209388858398 0.8616737096532927 1.0 21.101397336849598 -6.482347924152342 24.591126380820747 0.925734483558159 0.868867296932034 0.2642283782735759 0.049060787723279146 652.9806148373783 396180.8869781439 0.017991341459096585 0.015864407335571602 3.2934575935149023e-07 6.482347924152342 -0.056867186626125 KS(ph)SISSISGR ddPTM_KYSE-520_SHP099_60min_R1 4 KSSISSISGR 10 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KS(0.666)S(0.307)IS(0.025)S(0.002)ISGR;KS(0.945)S(0.041)IS(0.007)S(0.007)ISGR;KS(0.698)S(0.272)IS(0.024)S(0.005)ISGR;KS(0.689)S(0.089)IS(0.171)S(0.041)IS(0.009)GR 149.57 0.00017074 15614280000.0 25682600.0 24270800.0 21332900.0 22138300.0 23078500.0 24802900.0 22933400.0 24179900.0 29161100.0 24507600.0 True False 24257934.98100619 23104794.33678649 22708052.86784681 24242317.375877418 24894646.65129731 24648095.900931396 25251731.880415168 24096025.57053106 23866179.331509013 24290481.730624285 0.9986601027522208 0.9511871601812271 0.934853953069921 0.9980171511095993 1.0248724964524405 1.0147223992621046 1.0395731200579272 0.9919945531649105 0.9825321537950261 1.0 24.533887766103433 -5.441197029380113 6.124472868815295 1.0104852257116066 0.9608557803600615 0.4989311167726226 0.02123437087918021 0.19056091563018035 11.458160735407173 0.006281565363755541 0.009321783891778462 3.620786944045155e-06 5.441197029380113 -0.04962944535154512 KS(ph)SLTQEEAPVSWEK ddPTM_KYSE-520_SHP099_60min_R1 2 KSSLTQEEAPVSWEK 15 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2;A0A5F9ZH08 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 KS(0.499)S(0.499)LT(0.002)QEEAPVSWEK;KS(0.498)S(0.498)LT(0.005)QEEAPVSWEK 208.28 3.4963999999999996e-14 2825000000.0 3817100.0 3516200.0 3270100.0 3471500.0 3158500.0 3783900.0 3503300.0 3841500.0 4514300.0 3483700.0 True False 3605357.8537997985 3347276.474076197 3480895.878344999 3801430.3162554647 3407055.9805933014 3760283.2765335664 3857447.7529131533 3828174.733112839 3694616.9162422265 3452837.1282775872 1.0441725803609783 0.9694278501187086 1.0081262883318822 1.1009584799476972 0.9867410057342834 1.0890416016840463 1.1171820765369844 1.1087041151641246 1.0700235137025558 1.0 21.719350852612475 -5.630400682630079 0.9935783362849813 1.0821155001373657 1.004077392739158 0.20482799243440564 0.04655734195940498 0.7470763456135314 1.5475119136142168 0.020579275573381444 0.03766975421328046 2.3420670134975748e-06 5.630400682630079 -0.07803810739820771 KS(ph)SPEMEDAR ddPTM_KYSE-520_SHP099_60min_R1 3 KSSPEMEDAR 10 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 KS(0.758)S(0.242)PEMEDAR;KS(0.5)S(0.5)PEMEDAR;KS(0.5)S(0.5)PEMEDAR 104.17 0.00098264 1277230000.0 4469700.0 3842500.0 3633600.0 3560470.0 3981340.0 4024400.0 3621960.0 3846700.0 4668600.0 3823100.0 True False 4221756.83087395 3657900.5322899125 3867827.6699655578 3898855.9983056625 4294648.807274133 3999282.226824617 3988103.0637231516 3833356.6955265277 3820899.9258286906 3789230.3083267943 1.1141462744021349 0.96534130539696 1.020742302590066 1.0289308595832687 1.1333828925195406 1.0554339275805527 1.052483681173809 1.0116452111930927 1.0083577969468636 1.0 21.853473398424757 -7.303323870317854 4.5567310254466635 1.0062782903120087 1.0506765118199688 0.1858648310625507 0.04427270751952453 0.425790468687494 20.592565220004772 0.026233067258700154 0.012402325139547378 4.97366041407887e-08 7.303323870317854 0.044398221507960134 KS(ph)SPFKDLMTVPESR ddPTM_KYSE-520_SHP099_60min_R1 1 KSSPFKDLMTVPESR 15 2 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 KS(0.5)S(0.5)PFKDLMTVPESR 90.71799999999999 0.0016982 855470000.0 273780.0 305340.0 293290.0 341170.0 272450.0 236360.0 269650.0 287130.0 328650.0 288970.0 True False 258592.87763310078 290671.0080753162 312195.9426805921 373594.69422349957 293890.2649715519 234884.78956670995 296908.85353039426 286134.0130466456 268975.4445922976 286409.95061525825 0.9028767229546265 1.0148774770251678 1.0900317604536474 1.304405428027041 1.0261175086278413 0.8200999618279208 1.0366569069705245 0.9990365643092363 0.939127443074138 1.0 18.127722090830556 -6.001986928385299 24.99855625992582 0.9592596342600896 1.085750382231221 0.21429691251199334 0.10737650680772147 125.30212136734133 1576524.8996057112 0.03556620936485665 0.03973049198909936 9.95435378017493e-07 6.001986928385299 0.12649074797113125 KS(ph)SPQKEVK ddPTM_KYSE-520_SHP099_60min_R1 1 KSSPQKEVK 9 2 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 1 KS(0.5)S(0.5)PQKEVK 64.199 0.023112 550190000.0 727380.0 795340.0 516310.0 330100.0 735750.0 863560.0 346930.0 361560.0 844480.0 1204000.0 True False 687030.7814039188 757130.6725703205 549592.1687252083 361472.6047518158 793649.3391551436 858170.2017186836 382001.07011051313 360305.83274873847 691143.7196084078 1193333.4966978268 0.575724039679653 0.6344669571963247 0.4605520336486245 0.3029099625143155 0.6650691875752397 0.719136942098247 0.32011258476157783 0.30193222074614595 0.5791706354685673 1.0 20.186565853594054 -8.030607774929686 23.279814005967168 1.0000000063618184 0.4975956946289093 0.5160943278563723 0.14526695852675117 1362.7531679111596 1036489.0901841447 0.15001531152699704 0.03873378688031394 9.319491682550438e-09 8.030607774929686 -0.5024043117329091 KS(ph)SPSSPAVR ddPTM_KYSE-520_SHP099_60min_R1 1 KSSPSSPAVR 10 1 B3KNS5;Q8WVR3-2;Q8WVR3-3;Q8WVR3 B3KNS5 C7orf43 Uncharacterized protein C7orf43 1 KS(0.525)S(0.454)PS(0.016)S(0.004)PAVR 96.059 0.0017913 2145200000.0 583860.0 561600.0 442920.0 389910.0 506450.0 486200.0 446680.0 537630.0 592190.0 480450.0 True False 551472.1219039457 534619.8930212138 471471.3318970562 426966.9291692838 546304.7336936767 483165.44545326725 491834.7735766983 535765.0870137856 484663.2238950635 476193.58678444393 1.1580838911078777 1.1226944416267777 0.9900833295146301 0.8966246942812287 1.1472324467506312 1.0146408075671527 1.0328462777037244 1.1250993333018313 1.0177861217489548 1.0 18.86118866544283 -4.627113371137118 5.4656128366599495 1.0320475584927398 1.1494218669400342 0.31941257170072057 0.06612918056387716 0.23617159859184153 10.273040689338035 0.01735825954828297 0.0480938007509708 2.3598621185711102e-05 4.627113371137118 0.11737430844729446 KS(ph)SPSTGSLDSGNESK ddPTM_KYSE-520_SHP099_60min_R1 1 KSSPSTGSLDSGNESK 16 1 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 KS(0.691)S(0.309)PSTGSLDSGNESK 193.47 1.9795e-12 1656500000.0 1683600.0 1708900.0 1581600.0 1456100.0 1507000.0 1685300.0 1539800.0 1497600.0 2294800.0 1580400.0 True False 1590207.3518266054 1626801.8788888059 1683552.4666494739 1594487.3062075698 1625592.3263429187 1674781.4175697046 1695458.0109998186 1492405.1751424684 1878122.1672003756 1566398.885532593 1.0151994913389621 1.0385616932660644 1.0747916652641434 1.017931844139066 1.0377895064641849 1.0691921662088393 1.082392248015003 0.9527618979600041 1.199006322429675 1.0 20.579020212924657 -6.2401601226720755 20.791387429833122 1.059075745316698 1.0380059678695197 0.03614538162650138 0.06107028344201688 448.3518610000528 438067.88602540776 0.01897298582380761 0.01893444054661147 5.752278139961925e-07 6.2401601226720755 -0.021069777447178195 KS(ph)SPSVKPAVDPAAAK ddPTM_KYSE-520_SHP099_60min_R1 2 KSSPSVKPAVDPAAAK 16 2 Q6FI81-3;Q6FI81;H3BPG7;H3BV90;H3BT65 Q6FI81-3 CIAPIN1 Anamorsin 1 KS(0.423)S(0.423)PS(0.153)VKPAVDPAAAK;KS(0.598)S(0.39)PS(0.012)VKPAVDPAAAK 136.14 1.5467999999999998e-05 26339100000.0 11746900.0 10511100.0 9506000.0 9040300.0 8842200.0 9517200.0 9101200.0 9694800.0 11462400.0 8945900.0 True False 11095276.040135417 10006130.978517253 10118771.970137773 9899487.393934706 9538030.834764013 9457799.624573907 10021238.115152335 9661171.001583325 9381117.103589676 8866646.28580488 1.251349798164214 1.1285136066086947 1.1412175070451938 1.1164861070169632 1.0757202359627214 1.0666715824353383 1.1302174229275286 1.0896082566246545 1.0580231579338448 1.0 23.079957093043685 -1.0000000000000002 0.4064083831289846 1.0659866916928975 3.9060372194558295 0.7364459397002718 0.03240357811984009 40.511160893096005 0.5328377357875337 0.022689168896050972 92.56631501237717 0.09999999999999995 1.0000000000000002 2.8400505277629318 KS(ph)SSLESLQTAVAEVR ddPTM_KYSE-520_SHP099_60min_R1 1 KSSSLESLQTAVAEVR 16 1 R4GN62;A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8 R4GN62 PARD3B Partitioning defective 3 homolog B 1 KS(0.376)S(0.376)S(0.249)LESLQTAVAEVR 102.07 0.00061258 265940000.0 132370.0 119300.0 124200.0 102440.0 123380.0 100160.0 146180.0 142670.0 152160.0 103070.0 True False 125027.17222694709 113568.64892704925 132206.13072702618 112175.86680029087 133089.30406382852 99534.8642875344 160957.30097931786 142175.11106942818 124531.57964145442 102156.87998724659 1.2238742240616165 1.1117082759499637 1.2941480861938126 1.0980745184689966 1.3027933515632386 0.9743334399010666 1.5755894365549536 1.3917330980270495 1.2190229346961372 1.0 16.64042684335611 -6.750604627333733 24.99837615095398 1.3292308406009814 1.1737055091940816 0.11692783959322761 0.1637491680701904 368.08818382127913 849269.1911014 0.05977501912859932 0.045823311191021274 1.7758054015424537e-07 6.750604627333733 -0.15552533140689984 KS(ph)SSSSGDPSSDPLGSPTLLAL ddPTM_KYSE-520_SHP099_60min_R1 3 KSSSSSGDPSSDPLGSPTLLAL 22 1 P15407;E9PPX2;P15407-2 P15407 FOSL1 Fos-related antigen 1 1 KS(0.198)S(0.198)S(0.198)S(0.198)S(0.198)GDPS(0.004)S(0.004)DPLGSPTLLAL;KS(0.196)S(0.196)S(0.196)S(0.196)S(0.196)GDPS(0.01)S(0.011)DPLGSPTLLAL;KS(0.198)S(0.198)S(0.198)S(0.198)S(0.198)GDPS(0.005)S(0.006)DPLGSPTLLAL 81.96700000000001 0.0039457 166486000.0 348426.0 436580.0 306614.0 257738.0 251039.0 353804.0 246710.0 278403.0 346631.0 348423.0 True False 329098.1152099887 415606.04148006043 326378.82903974527 282233.34202824446 270794.341083477 351595.77799906983 271649.85445756937 277437.28497274866 283691.54825642036 345336.243288992 0.9529787898184364 1.2034822569499712 0.9451044753695825 0.8172711307108871 0.7841468897223882 1.0181259130245406 0.7866242241774817 0.8033830516323113 0.821493700037199 1.0 18.397642228464097 -4.976820304728024 6.907437692934226 0.8554150234045809 1.0788947190055485 0.4400959812590607 0.09691606888108067 0.13526456462308603 24.87010929775263 0.02452688036323106 0.050446576158896445 1.05482325363496e-05 4.976820304728024 0.2234796956009676 KS(ph)STPEEVK ddPTM_KYSE-520_SHP099_60min_R1 2 KSSTPEEVK 9 1 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 1 KS(0.51)S(0.336)T(0.155)PEEVK;KS(0.441)S(0.321)T(0.238)PEEVK 60.49 0.022912000000000002 7334100000.0 2070860.0 1712740.0 1714020.0 1464610.0 1680820.0 1732920.0 1574190.0 1529850.0 1983080.0 1889530.0 True False 1955985.2676429383 1630457.399524846 1824508.471728966 1603806.0940489469 1813090.9714424047 1722104.203485965 1733324.4878138765 1524543.3074196724 1623002.6613786502 1872790.2342320958 1.044423038891462 0.8706033221031751 0.9742193430846638 0.8563725209228031 0.9681228245969737 0.9195392906307434 0.9255305031663599 0.8140491548669273 0.8666227705123278 1.0 20.83675788589354 -7.030771013446226 24.419922432303984 0.8781595267595951 0.9339262141739645 0.06836749843877521 0.06657490344659507 1043.7215820547954 828294.4460192849 0.02910330186112877 0.016834870564623745 9.315989418095311e-08 7.030771013446226 0.05576668741436941 KS(ph)STPEEVKK ddPTM_KYSE-520_SHP099_60min_R1 3 KSSTPEEVKK 10 2 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 1 KS(0.462)S(0.462)T(0.077)PEEVKK;KS(0.874)S(0.031)T(0.095)PEEVKK;KS(0.333)S(0.333)T(0.333)PEEVKK 101.43 0.0014565 13156070000.0 7286280.0 6304790.0 6027320.0 6020580.0 6116110.0 6124950.0 6161390.0 6195830.0 7510900.0 5665070.0 True False 6882095.523560925 6001898.424717278 6415850.691252978 6592774.113046617 6597413.061094351 6086721.915115155 6784243.430571614 6174338.111847594 6147109.894380914 5614881.887157764 1.225688387016921 1.0689269240809303 1.1426510512940926 1.174160782994468 1.1749869709964533 1.0840338296405794 1.2082611116163258 1.0996381109938227 1.094788816206526 1.0 22.420824244202233 -8.06579223378284 1.3643850755928402 1.0010961164874692 1.149157945700137 0.4867643742481731 0.04765433817054973 0.4282830102148067 1.7575221297667913 0.0431523500717482 0.013000542022091935 8.5942457136908e-09 8.06579223378284 0.14806182921266786 KS(ph)STSDWPTDNQDGWDGK ddPTM_KYSE-520_SHP099_60min_R1 2 KSSTSDWPTDNQDGWDGK 18 1 A0A3B3IS53;A0A3F2YNX6;Q92794;A0A3B3ISZ3;A5PLL3 A0A3B3IS53 KAT6A;MYST3 Histone acetyltransferase KAT6A;Histone acetyltransferase 1 KS(0.515)S(0.321)T(0.082)S(0.082)DWPTDNQDGWDGK;KS(0.431)S(0.431)T(0.069)S(0.069)DWPTDNQDGWDGK 172.61 9.0648e-09 1064330000.0 627420.0 564980.0 560850.0 632120.0 616800.0 674430.0 775460.0 731090.0 767060.0 676400.0 True False 592615.761869239 537837.5127477312 597003.2883917288 692196.4947461926 665338.6508880646 670220.6322028945 853851.0645602801 728554.0194276896 627781.2400090293 670407.6222312375 0.8839633414323467 0.8022544716268454 0.890507906823604 1.032500931959034 0.9924389711944169 0.9997210800979253 1.2736297086219124 1.0867328999078656 0.9364172172142973 1.0 19.354679026356973 -5.312702529767893 1.3735967141887488 1.0688741095759344 0.8321542166339472 0.4809207651925165 0.08855396929826505 0.3829908218115993 1.4059719991719895 0.03176112366925556 0.07218736508984605 4.86740484687714e-06 5.312702529767893 -0.23671989294198725 KS(ph)STTLR ddPTM_KYSE-520_SHP099_60min_R1 1 KSSTTLR 7 1 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 KS(0.25)S(0.25)T(0.25)T(0.25)LR 72.607 0.026295 305130000.0 593860.0 523000.0 370170.0 403320.0 621470.0 705740.0 712210.0 287390.0 496220.0 1087700.0 True False 560917.4019694394 497874.29496099555 394031.750492941 441651.41153742076 670376.1533193982 701335.2148790389 784207.1372997672 286393.1111673302 406118.9566882387 1078063.8242177959 0.5203007367179032 0.46182265258945604 0.3654994645412911 0.4096709319208137 0.621833455737928 0.6505507365372383 0.7274218090647459 0.26565506116961735 0.3767114224270571 1.0 20.04001116128917 -5.7571804599924565 24.878069080057035 0.5785072574187156 0.435657372626494 0.14843215847528912 0.18945810201839008 242.01400364641114 1413690.24395424 0.057791474999865325 0.07195283809730608 1.7491197355182599e-06 5.7571804599924565 -0.14284988479222155 KS(ph)SVNGSSATSSG ddPTM_KYSE-520_SHP099_60min_R1 3 KSSVNGSSATSSG 13 1 P35226;R4GMX3 P35226 BMI1;COMMD3-BMI1 Polycomb complex protein BMI-1 1 KS(0.687)S(0.313)VNGSSATSSG;KS(0.499)S(0.499)VNGS(0.001)SATSSG;KS(0.512)S(0.279)VNGS(0.192)S(0.011)AT(0.005)SSG 94.765 0.0022393 8426400000.0 3307570.0 3376400.0 2820520.0 3039810.0 2889270.0 4475100.0 4721500.0 5262900.0 5866800.0 5257500.0 True False 3124092.4986226712 3214192.6759202736 3002335.2321915585 3328712.628447797 3116639.111302458 4447169.240945941 5198795.29739943 5244644.2282700995 4801537.009992666 5210922.64027311 0.5995277063754173 0.6168183444288887 0.5761619274459624 0.6387952495632013 0.5980973670987201 0.8534322130548574 0.9976727071747423 1.0064713276947097 0.9214370163324881 1.0 22.313107406453494 -6.411977234799455 2.738764527372061 0.9811129170242255 0.6042137119139758 0.9744093032315524 0.028893960511392053 0.039475060740658076 0.5753040794906615 0.011302428088812964 0.009546079001476122 3.8727794503912447e-07 6.411977234799455 -0.37689920511024977 KS(ph)T(ph)T(ph)PCMIPVK ddPTM_KYSE-520_SHP099_60min_R1 1 KSTTPCMIPVK 11 1 Q9H4I2;Q9H4I2-2;F6UBH9;A0A0A0MST6;A0A0A0MSU5;F6UQN6;F6XGA7;H0YNY7 Q9H4I2 ZHX3 Zinc fingers and homeoboxes protein 3 3 KS(1)T(1)T(1)PCMIPVK 51.927 0.042332 29272000.0 56609.0 47455.0 49243.0 33167.0 54774.0 44744.0 51428.0 54331.0 63150.0 49149.0 True False 53468.78592275623 45175.19056859282 52417.28257158575 36319.181707977834 59084.40217857135 44464.73609905591 56626.84412891202 54142.53844195071 51683.55188195213 48713.578097343365 1.0976156548367404 0.9273634237731448 1.0760302285092125 0.7455658797102102 1.212893909384036 0.9127791025779901 1.1624447708553811 1.1114465526173989 1.060968089403614 1.0 15.572036335088839 -5.7983048438656075 24.999981776740082 1.0784132273063067 0.9673642428310772 0.1847352921398071 0.11819211842352947 292.47829208379324 198339.99287740048 0.034675326699937024 0.03931918723367026 1.5910915018183495e-06 5.7983048438656075 -0.11104898447522948 KS(ph)TAALEEDAQILK ddPTM_KYSE-520_SHP099_60min_R1 1 KSTAALEEDAQILK 14 1 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q15052-2;Q15052 B1ALK7;Q15052-2 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 KS(0.895)T(0.105)AALEEDAQILK 190.57 6.012300000000001e-11 215260000.0 230780.0 279600.0 303200.0 327860.0 366270.0 278420.0 283330.0 338220.0 390760.0 374730.0 True False 217978.17335147577 266167.5963118438 322744.7571371524 359019.71582529653 395093.36520877277 276682.2775053446 311971.76143432833 337046.7937611411 319807.83425798285 371410.1837355282 0.5868933672176649 0.7166405445182273 0.868971210996656 0.9666393964063876 1.063765568394077 0.7449507030813216 0.8399655558622904 0.9074786005360143 0.8610637194743963 1.0 18.502653847662007 -4.606307973029893 2.3340309668095465 0.9055062480617156 0.5901627995628211 0.6164804872854923 0.08387080687875895 0.23529750245447006 2.3216926547120704 0.02398741868264476 0.11196497564495966 2.475665855917971e-05 4.606307973029893 -0.3153434484988945 KS(ph)TLTPTQR ddPTM_KYSE-520_SHP099_60min_R1 1 KSTLTPTQR 9 1 A0A088AWL3;O75376-2;O75376;E7EVK1 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 KS(0.701)T(0.04)LT(0.259)PTQR 132.69 0.00056157 527140000.0 1141100.0 1093700.0 775680.0 644480.0 715410.0 838350.0 619280.0 766100.0 842260.0 768670.0 True False 1077800.9082735456 1041157.010322831 825681.5739318805 705731.1854300227 771708.6968739127 833117.5466798579 681882.8659903685 763442.5779090835 689326.8156467612 761860.1818162104 1.4146964679321594 1.36659853759623 1.0837704786769737 0.9263263814990554 1.0129269323857093 1.0935307639963228 0.8950236306677917 1.0020770164009631 0.9047943862920678 1.0 19.53916673001784 -4.813887910741545 2.939424857515266 0.9799233994745207 1.410853707937517 0.8956946784122222 0.05583178432481483 0.07111097602174588 1.2264946784949782 0.01515524445674532 0.04183656354327223 1.5350131109719632e-05 4.813887910741545 0.4309303084629963 KS(ph)TPLKYEVGDLIWAK ddPTM_KYSE-520_SHP099_60min_R1 1 KSTPLKYEVGDLIWAK 16 2 Q96L73-2;Q96L73;D6RBV9;D6RA58 Q96L73-2 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific 1 KS(0.5)T(0.5)PLKYEVGDLIWAK 95.414 0.00097637 275980000.0 192380.0 207800.0 170560.0 174010.0 236600.0 185330.0 176020.0 215350.0 232480.0 191950.0 True False 181708.29789997792 197816.97608584084 181554.57050564885 190547.8580819859 255219.0739301493 184173.28672532688 193813.81938965336 214603.00111306764 190267.49234388332 190249.47233484007 0.9551053975075965 1.0397767397624207 0.954297366912597 1.0015683919828207 1.341496881951727 0.9680620107118139 1.0187351218958443 1.1280083906638396 1.0000947177872406 1.0 17.537532926793936 -5.5526967159001055 24.999988602748523 1.083048226980708 0.9869312538865881 0.15115123504220462 0.10238355473054746 372.35379174004294 312186.8911657759 0.03006933878740115 0.03881979018703972 2.800936635760095e-06 5.5526967159001055 -0.09611697309411993 KS(ph)VSNGALR ddPTM_KYSE-520_SHP099_60min_R1 2 KSVSNGALR 9 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 KS(0.692)VS(0.308)NGALR;KS(0.677)VS(0.323)NGALR 68.44 0.026782 8219200000.0 2952500.0 2592700.0 2685600.0 2357700.0 2481500.0 2234700.0 2500000.0 2482400.0 2859000.0 2274960.0 True False 2788718.9393371707 2468142.800277959 2858718.073111932 2581775.0991316447 2676779.9321963857 2220752.408380127 2752724.3976487517 2473789.133796514 2339877.669524958 2254805.6242920966 1.2367890647836652 1.0946144420110893 1.2678334852075932 1.1450100493439213 1.187144427598618 0.9848974938038569 1.22082558602495 1.0971185751646189 1.0377292145790038 1.0 21.104571640518117 -7.2136809210107335 0.2632296585893129 0.9751929606203715 1.2289582269285941 0.40042921422863587 0.07381072967108637 2.0432095321811885 0.5423293227011374 0.16927404940369473 0.196176125603985 6.11391052928872e-08 7.2136809210107335 0.2537652663082226 KS(ph)VSSPTSSNTPTPTK ddPTM_KYSE-520_SHP099_60min_R1 1 KSVSSPTSSNTPTPTK 16 1 Q5M775-4;Q5M775;Q5M775-5;Q5M775-3;Q5M775-2 Q5M775-4 SPECC1 Cytospin-B 1 KS(0.443)VS(0.316)S(0.229)PT(0.006)S(0.006)S(0.001)NTPTPTK 95.206 0.0010345999999999999 1168200000.0 688100.0 634310.0 662070.0 584990.0 673080.0 844490.0 669430.0 852760.0 1019000.0 876170.0 True False 649929.7213066567 603836.7954812796 704748.0915494545 640587.2737163439 726047.5666986683 839219.2246623394 737102.517407201 849801.9745956805 833975.2868995911 868407.8154499449 0.748415329461206 0.6953378179449201 0.8115404755820927 0.737657195524477 0.836067517796905 0.9663883831210316 0.8487976550801639 0.9785747657687486 0.9603498172888812 1.0 19.72801318433752 -6.117818655332587 0.6173872698405926 0.9869712698515298 0.7108989950577981 0.8103580619204048 0.046209880818385334 0.346090330240478 0.29032653442511624 0.035116396822075534 0.04495566929516542 7.623972913475958e-07 6.117818655332587 -0.27607227479373175 KS(ph)YTSDLQK ddPTM_KYSE-520_SHP099_60min_R1 2 KSYTSDLQK 9 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;E9PK58;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 KS(1)YTSDLQK;KS(1)YTSDLQK 110.92 0.00060762 620900000.0 830460.0 921590.0 809530.0 642330.0 764000.0 674050.0 786210.0 667050.0 880190.0 885140.0 True False 784392.7283190339 877315.433065207 861713.5990937966 703376.8500764435 824122.4534346313 669843.0039238476 865687.7794701701 664736.1592406408 720369.6837842505 877298.3482285001 0.8941003136537672 1.0000194743746427 0.9822355198021593 0.8017533049010629 0.9393867606142824 0.7635293116377566 0.9867655412987215 0.7577082079123035 0.8211228087216503 1.0 19.742708026699404 -5.246896490854222 24.48382083423934 0.8607578166866641 0.9629085501859668 0.1912970014649067 0.08547470091282874 884.5324247604441 1489159.4462859659 0.02182576653168414 0.037567473102046965 5.663742618107331e-06 5.246896490854222 0.1021507334993027 KSADTLWDIQK ddPTM_KYSE-520_SHP099_60min_R1 1 KSADTLWDIQK 11 1 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 82.705 0.016654 758920000.0 1828000.0 1593200.0 1311700.0 1185600.0 1833200.0 1659200.0 1401200.0 1423200.0 1494200.0 1264500.0 False True 1726597.1959723423 1516660.2805580455 1396254.280794205 1298279.067536361 1977462.4105188053 1648844.3173510109 1542846.9703941734 1418263.2513773777 1222890.9457167534 1253297.5137661137 1.3776435180055373 1.2101358726871931 1.114064510188416 1.0358905633149142 1.577807654446391 1.3156048737352821 1.2310301053402508 1.1316253609372828 0.9757387470130778 1.0 20.25729749849759 -7.501913649025152 2.2820634757589944 0.9853621710079645 1.2643703911906983 0.39254187652624717 0.13896833402912268 0.3634496721930066 3.5026892468977016 0.1225591880963218 0.04129727017107709 3.14837424459499e-08 7.501913649025152 0.27900822018273375 KSAEFLLHMLK ddPTM_KYSE-520_SHP099_60min_R1 1 KSAEFLLHMLK 11 1 A0A087WXM6;J3QQT2;J3QLC8;J3KRX5;A0A0A0MRF8;A0A0A6YYL6;P18621-2;P18621;P18621-3;J3KRB3;A0A087WWH0;J3QS96;A0A087WY81 A0A087WXM6 RPL17;RPL17-C18orf32 60S ribosomal protein L17 0 70.977 0.047550999999999996 35500000.0 141650.0 215090.0 185720.0 165950.0 282760.0 246780.0 153760.0 121360.0 138070.0 93108.0 False True 133792.39212772564 204756.75354332777 197691.8083625066 181721.8381053131 305011.6033156763 245239.7544816072 169303.56135298876 120939.03048563699 112999.968461459 92283.13555692793 1.4498032746751583 2.2187884309264367 2.142231158157319 1.9691771092152794 3.3051716489143317 2.657470977785783 1.8346099786406609 1.3105214702098167 1.2244920784226192 1.0 16.493779403678474 -7.130951127650652 2.8425985789431194 1.1766339502060734 2.3091447364074886 0.5423453511184901 0.4554643623189781 0.23323522982882022 3.6008435980348428 0.273327789259027 0.14066836242241562 7.396885095518425e-08 7.130951127650652 1.1325107862014152 KSAEPSANT(ph)TLVS(ph)ETEEEGSVPAFGAAAK ddPTM_KYSE-520_SHP099_60min_R1 1 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 2 KS(0.003)AEPS(0.077)ANT(0.486)T(0.433)LVS(0.974)ET(0.026)EEEGSVPAFGAAAK 115.2 0.00038035 677100000.0 612240.0 548870.0 558170.0 501410.0 495080.0 524610.0 576800.0 559800.0 702020.0 598700.0 True False 578277.826729819 522501.4613293341 594150.5313035764 549063.8556455864 534039.9793801279 521335.71439580095 635108.5730255196 557858.1844583026 574550.8644840546 593395.9837815518 0.9745226501949188 0.8805274649814343 1.001271575040357 0.9252908186984199 0.8999723523183217 0.8785629303950959 1.0702946942413476 0.9401111563027837 0.9682419163382227 1.0 19.17863563684979 -6.741613174318093 24.999944706867787 0.9896712701341625 0.926704813739051 0.32777621715024374 0.04747170223088229 310.02402051866454 390926.0578790825 0.018003356438065558 0.01392677013964807 1.8129541702390434e-07 6.741613174318093 -0.06296645639511145 KSAEPSANTT(ph)LVS(ph)ETEEEGSVPAFGAAAK ddPTM_KYSE-520_SHP099_60min_R1 3 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 2 KS(0.006)AEPS(0.271)ANT(0.242)T(0.483)LVS(0.966)ET(0.032)EEEGSVPAFGAAAK;KSAEPS(0.002)ANT(0.174)T(0.824)LVS(0.997)ET(0.003)EEEGSVPAFGAAAK;KS(0.007)AEPS(0.045)ANT(0.182)T(0.777)LVS(0.952)ET(0.037)EEEGS(0.001)VPAFGAAAK 143.62 1.9456e-06 1164120000.0 1214180.0 1057560.0 1019960.0 1045080.0 974260.0 1041140.0 973470.0 1087820.0 1268530.0 1145940.0 True False 1146827.014992178 1006753.2301700775 1085708.2535937016 1144404.0889852408 1050928.71921888 1034641.8590687258 1071877.8477516524 1084046.6063190976 1038196.9290389981 1135787.8631278288 1.0097193782595533 0.8863919600246434 0.9559076028544505 1.0075861224944629 0.9252860972864628 0.9109463947074073 0.9437306759026499 0.95444461198393 0.9140764422151189 1.0 20.115261969842088 KSAEPSANTTLVS(ph)ETEEEGSVPAFGAAAK ddPTM_KYSE-520_SHP099_60min_R1 13 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 KSAEPSANT(0.001)T(0.001)LVS(0.742)ET(0.249)EEEGS(0.008)VPAFGAAAK;KSAEPSANT(0.001)T(0.002)LVS(0.885)ET(0.059)EEEGS(0.052)VPAFGAAAK;KSAEPSANTT(0.001)LVS(0.789)ET(0.21)EEEGSVPAFGAAAK;KSAEPSANTTLVS(0.79)ET(0.209)EEEGSVPAFGAAAK;KSAEPSANTTLVS(0.999)ETEEEGSVPAFGAAAK;KSAEPS(0.002)ANT(0.002)T(0.002)LVS(0.993)ET(0.002)EEEGSVPAFGAAAK;KSAEPS(0.003)ANT(0.003)T(0.005)LVS(0.773)ET(0.215)EEEGSVPAFGAAAK;KSAEPSANTTLVS(0.987)ET(0.013)EEEGSVPAFGAAAK;KSAEPSANTTLVS(0.991)ET(0.009)EEEGSVPAFGAAAK;KSAEPS(0.001)ANT(0.001)T(0.001)LVS(0.996)ET(0.001)EEEGSVPAFGAAAK;KSAEPSANTT(0.001)LVS(0.99)ET(0.009)EEEGSVPAFGAAAK;KSAEPS(0.001)ANTTLVS(0.994)ET(0.005)EEEGSVPAFGAAAK;KS(0.001)AEPS(0.005)ANT(0.013)T(0.013)LVS(0.654)ET(0.295)EEEGS(0.019)VPAFGAAAK 333.93 8.737999999999998e-79 72951300000.0 20035710.0 21881010.0 16671494.0 14555457.0 15173812.0 21865470.0 16068728.0 21019940.0 23436250.0 23098190.0 True False 18924289.226102334 20829813.43553439 17746165.178573556 15938803.257022297 16367904.677219728 21728999.49114574 17693111.84191266 20947026.73423088 19180817.779784653 22893558.006719876 0.8266207122784298 0.9098547910036648 0.7751597708562635 0.6962134611118039 0.71495678707588 0.949131606575426 0.7728423793592615 0.9149747159477073 0.8378259846789462 1.0 24.448438361257484 -7.2712882622743225 23.74211845339945 0.9073002854027781 0.8069098054299744 0.2751468988522442 0.08220081484831256 567.1523964256886 1367185.6875018948 0.04618450078154672 0.022653916896380098 5.354411413304689e-08 7.2712882622743225 -0.1003904799728037 KSAEPSANTTLVSET(ph)EEEGSVPAFGAAAK ddPTM_KYSE-520_SHP099_60min_R1 1 KSAEPSANTTLVSETEEEGSVPAFGAAAK 29 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 KSAEPSANTTLVS(0.431)ET(0.569)EEEGSVPAFGAAAK 161.01 1.0197000000000001e-09 11834000000.0 553370.0 658790.0 409210.0 419010.0 398620.0 606930.0 413630.0 585970.0 671480.0 686310.0 True False 522673.4629842532 627140.73953605 435588.3313591492 458832.58442005026 429989.12616245187 603141.9247407477 455443.7570397813 583937.4068364254 549556.1586333058 680229.8273411001 0.7683777481903326 0.9219541900822461 0.6403546475781401 0.6745258234463886 0.6321233043296623 0.8866737395187806 0.669543937554211 0.8584413434484857 0.8078977671141313 1.0 19.37566274248437 -8.227504815275392 0.8369002129454225 0.9992423771416455 0.7417756354271288 0.3815304230109178 0.0967440061733228 1.0050678012729783 1.4417819951881599 0.09634100536505329 0.03375106173661063 5.922365203691378e-09 8.227504815275392 -0.2574667417145168 KSATVKPGAVGAGEFVS(ph)PCES(ph)GDNTGEPSALEEQR ddPTM_KYSE-520_SHP099_60min_R1 2 KSATVKPGAVGAGEFVSPCESGDNTGEPSALEEQR 35 2 Q12888;Q12888-2;A6NNK5 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 KSATVKPGAVGAGEFVS(1)PCES(1)GDNTGEPSALEEQR;KSATVKPGAVGAGEFVS(1)PCES(0.999)GDNT(0.001)GEPSALEEQR 203.11 3.2357999999999997e-16 998850000.0 476650.0 473720.0 384490.0 369540.0 384610.0 413040.0 369020.0 428300.0 503710.0 401100.0 True False 450209.2743217826 450961.780131783 409274.8406057513 404660.97049374756 414876.61886844743 410462.0641505909 406324.1428881372 426814.32726597163 412248.96149577346 397546.5660510778 1.1324692822624924 1.1343621568947027 1.0295016371822128 1.017895776369895 1.0435925104057948 1.032488013235294 1.0220793677687852 1.0736209634650282 1.036982825913296 1.0 18.600764332761496 -4.760117581888003 24.99984719835625 1.0342199907792795 1.1334157587208376 0.8342799750025964 0.018055059566621207 12.16158233806824 229995.36233643824 0.004647181859027616 0.011009579108112112 1.7373303962375406e-05 4.760117581888003 0.09919576794155804 KSDASDMNSDT(ph)SPSCR ddPTM_KYSE-520_SHP099_60min_R1 1 KSDASDMNSDTSPSCR 16 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KS(0.001)DAS(0.042)DMNS(0.412)DT(0.527)S(0.017)PSCR 174.35 3.0497e-08 378200000.0 245160.0 206670.0 196100.0 196190.0 238610.0 225150.0 230270.0 239140.0 272790.0 229790.0 True False 231560.48608565633 196741.26298200543 208740.91977109364 214835.83861332553 257387.24949481362 223744.75533484825 253547.93881863152 238310.47915569553 223258.21247628995 227754.23937391504 1.0167120784324564 0.863831397926279 0.9165182626014424 0.9432792083427226 1.1301095874323053 0.9823955679152727 1.1132523351294012 1.046349257036001 0.9802593053372598 1.0 17.797118382764033 -5.615175322990015 8.504271982559013 1.0447997017670334 0.9262520196961065 0.4445608426101978 0.05849589975420406 0.21687323013562287 17.74229629453979 0.016526945284409674 0.021346769951046694 2.425630679749259e-06 5.615175322990015 -0.11854768207092692 KSDASDMNSDTS(ph)PSCR ddPTM_KYSE-520_SHP099_60min_R1 5 KSDASDMNSDTSPSCR 16 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 KSDASDMNS(0.004)DT(0.022)S(0.963)PS(0.011)CR;KSDASDMNSDT(0.109)S(0.891)PSCR;KSDASDMNSDT(0.048)S(0.944)PS(0.008)CR;KSDASDMNSDT(0.083)S(0.917)PSCR;KSDASDMNS(0.001)DT(0.314)S(0.677)PS(0.008)CR 204.21 4.8838e-13 4023480000.0 3241050.0 2956400.0 2632410.0 2482770.0 2689250.0 2559260.0 2425050.0 2444470.0 3588250.0 2381190.0 True False 3061262.4956270047 2814370.1063531283 2802099.360604917 2718731.714327978 2900878.675260583 2543286.709030706 2670197.720207241 2435990.7041135845 2936714.2524214517 2360094.5091377846 1.2970931815545719 1.1924819516576497 1.187282691331124 1.1519588320728793 1.2291366570402147 1.0776207050961901 1.1313944038549315 1.0321581168389427 1.2443206155732824 1.0 21.17041320227331 -1.000000000000011 0.1074972907201538 0.962429960592424 1.8430166148965164 0.4821451593658441 0.06507574198357834 97.65594745826783 0.7372361776372695 0.6222687090893424 12.734192761813604 0.09999999999999744 1.000000000000011 0.8805866543040923 KSDGACDS(ph)PSS(ph)DKENSSQIAQDHQK ddPTM_KYSE-520_SHP099_60min_R1 3 KSDGACDSPSSDKENSSQIAQDHQK 25 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 2 KSDGACDS(1)PS(0.101)S(0.899)DKENSSQIAQDHQK;KSDGACDS(1)PS(0.29)S(0.709)DKENS(0.001)S(0.001)QIAQDHQK;KSDGACDS(1)PS(0.243)S(0.757)DKENSSQIAQDHQK 176.97 6.807200000000001e-11 3502700000.0 2006790.0 1984980.0 1982100.0 1885650.0 1856440.0 1771000.0 1913860.0 2072810.0 2387710.0 1824110.0 True False 1895469.358263313 1889618.5812842757 2109869.3374721296 2064861.609058654 2002531.2663012915 1759946.5320809076 2107331.646273616 2065619.9059074915 1954162.0532708773 1807949.8045361065 1.0484081767688582 1.045172037709932 1.166995528403783 1.1421011821666516 1.1076254779181283 0.9734487803064223 1.1655918991701908 1.1425206057850148 1.0808718518445188 1.0 20.785923193010845 -8.027890766374517 22.450728239717687 0.9999999968634823 1.0999974522783293 0.20407322058236732 0.05840577788688853 1318.8298627251188 1061595.8543544877 0.058613826318533235 0.015134024898520138 9.377978519157694e-09 8.027890766374517 0.09999745541484706 KSDGIYIINLK ddPTM_KYSE-520_SHP099_60min_R1 1 KSDGIYIINLK 11 1 C9J9K3;A0A0C4DG17;P08865;F8WD59 C9J9K3 RPSA 40S ribosomal protein SA 0 172.11 0.00069727 0.0 1134800.0 1195900.0 699250.0 633130.0 999270.0 1048400.0 726920.0 743080.0 748430.0 775510.0 False True 1071850.3818322835 1138447.1689175041 744324.773839557 693302.4848425237 1077906.863931446 1041856.5467157661 800404.1676555335 740502.4289161756 612533.9783849472 768639.58473765 1.3944772076735088 1.4811196190293476 0.9683664341768293 0.9019864428126738 1.4023566900985907 1.3554552320791151 1.041325718254187 0.9633935639275226 0.7969066263924146 1.0 19.551947751168175 -1.0000000000224456 0.20755263868422721 0.9218569841295292 3.3494371772580953 0.3267830227696381 0.19413512109303724 71.0743554720109 0.8778127391001035 0.37419545943818594 56.77342823912052 0.09999999999483171 1.0000000000224456 2.4275801931285663 KSDIDEIVLVGGSTR ddPTM_KYSE-520_SHP099_60min_R1 3 KSDIDEIVLVGGSTR 15 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ;; 132.51 6.8365e-05 873750000.0 2565010.0 2157780.0 1455450.0 2027940.0 2353630.0 2260670.0 1846220.0 2247950.0 1894870.0 1796440.0 False True 2422723.782079331 2054117.0099061874 1549270.6358023353 2220674.807877605 2538847.2906771647 2246560.3199770446 2032853.9349708345 2240152.386125473 1550809.373785507 1780524.9392091732 1.3606794989096826 1.1536580952460744 0.870120154840656 1.24720230476745 1.425898191465267 1.2617404398586312 1.1417160693484778 1.2581415383715124 0.8709843595194486 1.0 20.76387121250699 -7.759534309788946 24.999971798219324 0.9354921117166428 1.2085934853707982 0.37516559378328507 0.1440482579785172 55.21222016238144 724624.8661346704 0.11714202973589306 0.03916114790279805 1.7396652569515455e-08 7.759534309788946 0.27310137365415543 KSDLFQDDLYPDTAGPEAALEAEEWVSGR ddPTM_KYSE-520_SHP099_60min_R1 1 KSDLFQDDLYPDTAGPEAALEAEEWVSGR 29 1 Q9BR76 Q9BR76 CORO1B Coronin-1B 0 78.311 0.033803 66629000.0 37004.0 25976.0 15221.0 22408.0 25432.0 13476.0 17533.0 21036.0 23419.0 20985.0 False True 34951.31435435483 24728.073969229103 16202.170014461088 24537.649582789123 27433.353711714088 13391.891285331614 19305.406745590237 20963.031025839315 19166.69994494754 20799.08922608295 1.6804252327801152 1.1889017687475967 0.7789845910244412 1.1797463492784992 1.318968990109023 0.6438691204102153 0.9281851977143513 1.0078821624338616 0.9215163095176147 1.0 14.344232734945535 -4.341362672109168 3.104688167210536 0.9787770290820931 1.7312199665347094 0.5879479676285388 0.17901380840680056 0.2129214289371741 3.2661987369266687 0.047223469316848295 0.34855372735596984 4.556562460642212e-05 4.341362672109168 0.7524429374526164 KSDPVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 KSDPVTPK 8 1 Q8IYW5 Q8IYW5 RNF168 E3 ubiquitin-protein ligase RNF168 1 KSDPVT(1)PK 65.5 0.050548 719540000.0 320930.0 313850.0 258230.0 221560.0 324960.0 266670.0 269410.0 268000.0 315570.0 287470.0 True False 303127.37314190617 298772.17490154546 274875.9189826085 242616.99578555717 350532.5032305207 265005.6136137859 296644.5919882203 267070.37055167014 258270.44287232996 284923.239448276 1.0638913615080348 1.048605847245337 0.964736746342197 0.851517048084107 1.2302699629180482 0.9300947656180714 1.0411386328564896 0.9373414785990217 0.9064562208840655 1.0 18.12021377271995 -7.2722638208444135 23.277021468674437 0.9414241146988073 1.0159995167713227 0.10117680356217296 0.0957252002913663 687.8208013081519 1479080.3742470292 0.050736467717466274 0.024805646691836103 5.342397262281649e-08 7.2722638208444135 0.07457540207251545 KSDT(ph)PLGS(ph)PLEPGQILEK ddPTM_KYSE-520_SHP099_60min_R1 1 KSDTPLGSPLEPGQILEK 18 1 H0YEX2 H0YEX2 TAF2 2 KS(0.126)DT(0.874)PLGS(1)PLEPGQILEK 126.04 4.7428999999999996e-05 334370000.0 412120.0 371780.0 372900.0 381000.0 356500.0 403570.0 373450.0 355120.0 442300.0 365130.0 True False 389258.88205914816 353919.13074684306 396937.7306610955 417210.1254481734 384554.5217924686 401051.1699333092 411201.9705207703 353888.1716056315 361989.4694756525 361895.23226684146 1.075612075961615 0.9779601917658941 1.096830505820026 1.1528478085628544 1.0626128434566373 1.1081968873179195 1.1362458906824524 0.9778746445178199 1.0002603991443069 1.0 18.46521257570821 -7.275763041984826 24.9226820456919 0.9918006308093077 1.0857448791211193 0.48023260364079234 0.04502019126860451 756.9272425883959 1317020.5297055126 0.026311866868294852 0.012742169404944057 5.2995251559166745e-08 7.275763041984826 0.09394424831181158 KSDTKVDS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 KSDTKVDSSPR 11 2 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 KSDT(0.001)KVDS(0.5)S(0.5)PR 96.59100000000001 0.0015800999999999999 265000000.0 379230.0 465850.0 431160.0 254240.0 306980.0 222800.0 201270.0 194140.0 465050.0 215130.0 True False 358193.35592373763 443469.86674489465 458953.26348039194 278402.89315995673 331137.5795227268 221409.42255653636 221616.33580590578 193466.57365261685 380608.64295648254 213224.11556860752 1.6798913901860433 2.0798297864305253 2.1524453847844334 1.3056820163963918 1.5530024764772874 1.0383882797032642 1.0393586823653536 0.9073390837462124 1.785016868010021 1.0 17.70201109003726 -5.339034093473393 4.990750027517911 1.2180541320359328 1.980361846494407 0.5956437945465094 0.2787420611240707 0.1470707225229935 6.60617344561235 0.08009606762149195 0.12155137326483294 4.5810592255704045e-06 5.339034093473393 0.7623077144584742 KSDTKVDSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 KSDTKVDSSPR 11 2 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 KS(0.002)DT(0.012)KVDS(0.144)S(0.842)PR;KSDT(0.015)KVDS(0.137)S(0.848)PR 79.46600000000001 0.0085364 0.0 611640.0 719150.0 717730.0 379280.0 528580.0 456660.0 324710.0 336030.0 819820.0 381500.0 True False 577711.109925888 684600.9545338434 763996.0242086037 415326.6571653097 570176.2387912015 453809.81555057346 357534.8556642106 334864.3903599916 670961.3539803956 378120.2068025083 1.5278504018898564 1.8105378718662597 2.0205109657301064 1.0983984714211115 1.5079232173619428 1.2001734035536422 0.945558711838298 0.8856030022613702 1.774465743722704 1.0 18.52848542366888 -5.269312946337144 24.95937314113624 1.1989844019028386 1.788723563397691 0.48529534625997217 0.27586669999818436 476.90033053664826 1511783.472787369 0.07770544953143965 0.11766306356576837 5.378820527908014e-06 5.269312946337144 0.5897391614948524 KSDVEAIFSK ddPTM_KYSE-520_SHP099_60min_R1 4 KSDVEAIFSK 10 1 P07910;G3V2Q1;G3V576;G3V555;G3V575;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;G3V2H6;G3V4M8;B4DSU6;P07910-2;G3V4C1;B2R5W2;P07910-4;G3V4W0;G3V5X6;G3V3K6;G3V251;B4DY08 P07910;P07910-2;B4DY08 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 0 ;;; 127.56 0.00098311 4681470000.0 14752800.0 13111100.0 9009130.0 8535280.0 12836600.0 11306410.0 9426570.0 11534600.0 11347500.0 10260200.0 False True 13934432.775022313 12481223.07583768 9589872.934917664 9346470.444974497 13846767.389736895 11235842.501290148 10379499.690057535 11494589.164795881 9287080.0471964 10169302.610314801 1.3702446774362396 1.2273430690495806 0.9430216901196925 0.9190866673093493 1.3616240877414754 1.104878370901614 1.0206697634830464 1.1303222654753957 0.9132465030371348 1.0 23.277717409765017 -4.547162000384725 5.0887486815996334 1.0614795246702384 1.3415565948371857 0.40243630462540314 0.12635351018934565 0.1683259380473148 11.72335605827271 0.033367461921743065 0.10251407777242981 2.8368606262341413e-05 4.547162000384725 0.2800770701669473 KSEAPAEVTHFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 KSEAPAEVTHFSPK 14 1 Q6PID6 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 1 KSEAPAEVTHFS(1)PK;KSEAPAEVTHFS(1)PK;KSEAPAEVT(0.001)HFS(0.999)PK 165.3 2.176e-08 5679490000.0 4543200.0 4082700.0 3674260.0 3911600.0 3923800.0 3863800.0 3763400.0 3858510.0 4674000.0 3684970.0 True False 4291179.639355337 3886560.9637423586 3911108.678623856 4283357.287934579 4232580.736631945 3839684.590996161 4143841.199244531 3845125.7293930054 3825319.4219516166 3652324.032663282 1.1749175596082586 1.0641336663954952 1.0708547882515966 1.1727758133253983 1.1588732814447293 1.0512989966545372 1.1345765496668798 1.0527887709320063 1.0473658382282653 1.0 21.800383335626172 -7.668277433101969 1.0032852018258507 1.0012655211449235 1.1189254768189498 0.46525981403363637 0.04298477073379146 0.4765137607995099 0.9606137546194707 0.0410366291752742 0.014496574072408891 2.1464588495567106e-08 7.668277433101969 0.11765995567402632 KSEATPSPGACLQPEVPLS(ph)PAEQATTVK ddPTM_KYSE-520_SHP099_60min_R1 2 KSEATPSPGACLQPEVPLSPAEQATTVK 28 1 A0A2R8Y8D9;Q2NL68 A0A2R8Y8D9 PROSER3 Proline and serine-rich protein 3 1 KSEATPSPGACLQPEVPLS(1)PAEQATTVK;KSEATPSPGACLQPEVPLS(1)PAEQATTVK 214.98 1.7631999999999998e-22 1108940000.0 685890.0 783110.0 620570.0 536850.0 580190.0 1037600.0 772010.0 1180830.0 1308060.0 1256760.0 True False 647842.314412183 745488.2201279247 660572.9351471069 587872.0625901619 625847.6521704698 1031123.9535218218 850052.3048915253 1176733.976337793 1070549.2775092043 1245626.0841444836 0.5200937284940783 0.598484753665012 0.5303139871230291 0.4719490624619684 0.5024362127101025 0.8277957299120102 0.6824297561778784 0.9446927864761224 0.8594467401864623 1.0 20.24843963005469 -6.775664889492187 0.9595490731235621 0.9511937091944049 0.5210075515634476 0.8234271971784826 0.07906715126101466 0.22929504978745882 0.41399100308115044 0.059766263181986856 0.033799213973946134 1.6762357949757744e-07 6.775664889492187 -0.43018615763095736 KSECFS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 2 KSECFSSPK 9 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 KS(0.002)ECFS(0.499)S(0.499)PK;KSECFS(0.657)S(0.343)PK 54.7 0.037676999999999995 1106060000.0 1412010.0 1401490.0 1231380.0 1231420.0 1382080.0 1354870.0 1219320.0 1231680.0 1678330.0 1375180.0 True False 1333682.9905278482 1334160.3167206235 1310756.7250776624 1348453.7865600782 1490841.8330404907 1346413.7537664927 1342580.7650164303 1227407.5895562717 1373587.5792563218 1362996.9750738512 0.978492993688108 0.9788431971012517 0.9616725121540654 0.9893299920838159 1.093796875785225 0.9878332662429717 0.9850210892387969 0.9005211398138041 1.0077700863436596 1.0 20.378350929669207 -9.726931929184092 10.585691438895314 0.9999999384453581 0.9866723979345595 0.007415135736856149 0.04484098132025127 0.0 0.0 0.04589994248349097 0.011132371239365219 1.8752884155755884e-10 9.726931929184092 -0.013327540510798541 KSECFSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 KSECFSSPK 9 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 KSECFS(0.143)S(0.857)PK;KSECFS(0.138)S(0.862)PK;KSECFS(0.037)S(0.963)PK 108.72 0.0011497 12590400000.0 26793500.0 24407200.0 20984000.0 21614300.0 22715200.0 22170900.0 21501300.0 21185700.0 25959400.0 21015600.0 True False 25307211.143481936 23234641.47604589 22336662.21558708 23668516.573423762 24502757.008191533 22032523.189222205 23674861.23646608 21112211.751479562 21245827.343220077 20829418.13388939 1.214974464519832 1.1154724211063396 1.0723613147524946 1.1363023403383108 1.1763534079872175 1.0577598974488571 1.136606941407891 1.0135766450974484 1.0199913990229614 1.0 24.312119202722254 -7.269620422852783 1.3144822073727704 0.9972649934730486 1.1325455489366758 0.5918765948687867 0.044280980721498234 0.3352633360065174 1.0249552063643526 0.037185129840813506 0.01420322167205744 5.3750137199885444e-08 7.269620422852783 0.13528055546362716 KSEDSLLRNS(ph)DEEES(ph)AS(ph)ESELWK ddPTM_KYSE-520_SHP099_60min_R1 5 KSEDSLLRNSDEEESASESELWK 23 2 Q70Z53 Q70Z53 FRA10AC1 Protein FRA10AC1 3 KSEDS(0.008)LLRNS(0.992)DEEES(0.958)AS(0.573)ES(0.469)ELWK;KSEDS(0.107)LLRNS(0.893)DEEES(0.97)AS(0.86)ES(0.17)ELWK;KSEDS(0.021)LLRNS(0.979)DEEES(1)AS(0.976)ES(0.025)ELWK;KSEDS(0.019)LLRNS(0.981)DEEES(0.996)AS(0.998)ES(0.006)ELWK;KS(0.002)EDS(0.132)LLRNS(0.866)DEEES(0.838)AS(0.581)ES(0.581)ELWK 131.49 1.7193e-05 1982960000.0 3711520.0 3779420.0 3439320.0 3516350.0 3327610.0 3265410.0 3131020.0 3401350.0 4671110.0 3213980.0 True False 3505634.586868307 3597850.99017492 3661024.0703065656 3850542.8467708253 3589473.9754890283 3245029.3649476636 3447534.0574104832 3389551.510731057 3822954.173100643 3185506.6376386047 1.1004951443036424 1.1294438842676477 1.1492752917383524 1.20876936851251 1.1268141566799188 1.0186854821163338 1.0822561211067254 1.0640541352768014 1.2001086822203497 1.0 21.603091412914363 -6.014484134579497 24.703616161207815 1.0770623917938944 1.1486408603273137 0.2868277568616392 0.05566455678722801 794.3714376856948 1354852.0350988999 0.017936759785183658 0.018623215142868698 9.671990592184463e-07 6.014484134579497 0.07157846853341931 KSEDSLLRNS(ph)DEEES(ph)ASESELWK ddPTM_KYSE-520_SHP099_60min_R1 2 KSEDSLLRNSDEEESASESELWK 23 2 Q70Z53 Q70Z53 FRA10AC1 Protein FRA10AC1 2 KSEDS(0.014)LLRNS(0.986)DEEES(0.967)AS(0.033)ESELWK;KSEDS(0.001)LLRNS(0.999)DEEES(0.464)AS(0.464)ES(0.072)ELWK 169.5 1.3012e-10 1131530000.0 2264570.0 2277120.0 2027780.0 2026990.0 1977420.0 1834380.0 1855420.0 1918630.0 2753100.0 1895000.0 True False 2138949.7877916256 2167723.7371731983 2158493.9433627124 2219634.5201632315 2133031.704019256 1822930.9539912886 2042983.9607541775 1911974.72034161 2253206.4400032046 1878211.7742876932 1.1388224784198344 1.1541423426521227 1.1492282036094228 1.181780750472093 1.135671564421005 0.9705673124547578 1.0877282257103162 1.0179761124470224 1.1996551564893299 1.0 20.840928309892806 -6.024600445350778 23.895035092770524 1.0577624030812343 1.155796522128297 0.40672840350224637 0.05879039833025296 431.3919014112491 419021.07787976356 0.018433558505080272 0.01853477617339818 9.449298200478994e-07 6.024600445350778 0.09803411904706283 KSEDSLLRNS(ph)DEEESASESELWK ddPTM_KYSE-520_SHP099_60min_R1 1 KSEDSLLRNSDEEESASESELWK 23 2 Q70Z53 Q70Z53 FRA10AC1 Protein FRA10AC1 1 KS(0.023)EDS(0.069)LLRNS(0.908)DEEESASESELWK 72.891 0.0045773 0.0 73024.0 105750.0 66540.0 74028.0 83328.0 76551.0 70732.0 60504.0 107380.0 55640.0 True False 68973.21315026497 100669.61126601389 70829.27486776431 81063.59886267025 89885.43952853541 76073.21681384827 77882.28083779656 60294.125745739744 87882.49882951741 55147.07288726495 1.250713946164727 1.8254751520866561 1.2843705233922005 1.4699528845055014 1.629922221117425 1.3794606464310777 1.4122649990328284 1.0933332013649522 1.593602239037641 1.0 15.750996691601864 -10.783454895219345 0.207826136770709 0.5178858596146133 1.5453367783554832 0.30685186969296063 0.19810107008311933 33.18085671594809 1.109131615965358 8.451458763899574 0.47841941564051294 1.6464369524321607e-11 10.783454895219345 1.02745091874087 KSEEEIDFLR ddPTM_KYSE-520_SHP099_60min_R1 6 KSEEEIDFLR 10 1 B0QY89;Q9Y262-2;Q9Y262;B0QY90 B0QY89 EIF3L Eukaryotic translation initiation factor 3 subunit L 0 ;;;;; 138.24 0.00063809 3106230000.0 6764600.0 6372640.0 4312930.0 3972310.0 6476940.0 6102510.0 4729130.0 4945580.0 5095710.0 5431700.0 False True 6389354.153104214 6066488.808872347 4590948.368731987 4349837.148081449 6986638.329252496 6064421.971478858 5207196.612261063 4928424.937287044 4170457.516395604 5383579.363798649 1.1868226919935088 1.1268504463156714 0.8527687730589371 0.8079823578586957 1.2977682424881594 1.1264665312187034 0.9672368995386872 0.9154550540162468 0.7746625868357093 1.0 22.360134261317604 -7.073088774888912 3.1876437967473454 0.8843446493554581 1.0577555460376733 0.2106840482526745 0.14676275645800965 0.4514256743948974 8.879768299748035 0.08220739566042662 0.045284143845181216 8.451060779027093e-08 7.073088774888912 0.1734108966822152 KSEEWPDWS(ph)EPEEPENQTVNIQIWPR ddPTM_KYSE-520_SHP099_60min_R1 2 KSEEWPDWSEPEEPENQTVNIQIWPR 26 1 X6RHX1;Q8IZE3-2;Q8IZE3 X6RHX1 SCYL3 Protein-associating with the carboxyl-terminal domain of ezrin 1 KSEEWPDWS(1)EPEEPENQTVNIQIWPR;KS(0.001)EEWPDWS(0.999)EPEEPENQTVNIQIWPR 181.89 1.846e-11 322340000.0 257640.0 267320.0 236389.0 263310.0 242907.0 252580.0 197303.0 254660.0 330090.0 243200.0 True False 243348.19560739328 254477.54594449943 251627.01317577323 288334.90323296154 262022.398948228 251003.554530206 217248.3127317167 253776.6438980908 270153.976891743 241045.43720673665 1.0095532129848268 1.05572438496831 1.0438986777416621 1.1961848627969103 1.0870249276840702 1.0413122000518458 0.90127535807861 1.0528166259394283 1.1207595548055984 1.0 17.878945595390572 -6.424420377162159 5.318541887180943 1.0166076326180904 1.0811225353267746 0.14536816839920297 0.06802743212739502 0.45576645459258003 19.571315975185072 0.026029216664855106 0.02268757640521632 3.763393433810346e-07 6.424420377162159 0.06451490270868421 KSEIEYYAMLAK ddPTM_KYSE-520_SHP099_60min_R1 2 KSEIEYYAMLAK 12 1 E5RI99;P62888 E5RI99 RPL30 60S ribosomal protein L30 0 ; 125.61 0.00023307 1877190000.0 4428400.0 3873600.0 2249500.0 2263600.0 3646900.0 3205000.0 2691900.0 2659200.0 2492900.0 2532600.0 False True 4182747.8242034656 3687506.441607865 2394506.36932726 2478731.863423841 3933890.2819774286 3184996.406165618 2964023.522412268 2649975.8558619474 2040252.2008949865 2510163.1343329838 1.6663250953667326 1.469030594534539 0.9539246021807039 0.9874783951372568 1.5671851076813645 1.2688404042759376 1.180809120280498 1.0556986594284103 0.8127966557190057 1.0 21.259349696625833 -4.5909937534164325 4.992084015189461 1.1275797191072876 1.624052674164485 0.47758916492547077 0.19742517461204323 0.1701811176694432 7.895120584656057 0.05453964721207146 0.15742093209076052 2.56452092250111e-05 4.5909937534164325 0.49647295505719735 KSES(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 6 KSESPFR 7 1 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 KS(0.002)ES(0.998)PFR;KS(0.038)ES(0.962)PFR;KS(0.034)ES(0.966)PFR;KSES(1)PFR;KS(0.436)ES(0.564)PFR;KS(0.185)ES(0.815)PFR 110.38 0.0030007 4589700000.0 6781090.0 5750640.0 5230520.0 6089000.0 6421570.0 6312440.0 6114070.0 6488430.0 6692730.0 6067080.0 True False 6404929.419932226 5474370.622513381 5567687.688327906 6667696.729275389 6926911.025264693 6273041.720479279 6732139.863172919 6465923.150740951 5477498.941993632 6013330.391316809 1.0651218215418334 0.9103725001404079 0.9258908667928164 1.1088192890421384 1.1519259003741231 1.043189266556431 1.1195360016961755 1.0752649081244035 0.9108927309071672 1.0 22.519732796246586 -5.2595278986321645 24.920202068526926 1.0674500157186486 0.9614528048664925 0.2320066299133411 0.07476028711725141 213.02095765890923 2777149.552246513 0.02078983138063881 0.03382765988020264 5.501385790374066e-06 5.2595278986321645 -0.10599721085215608 KSES(ph)PFRETEPLVS(ph)PHQDK ddPTM_KYSE-520_SHP099_60min_R1 3 KSESPFRETEPLVSPHQDK 19 2 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 2 KS(0.155)ES(0.845)PFRETEPLVS(1)PHQDK;KS(0.012)ES(0.985)PFRET(0.002)EPLVS(1)PHQDK;KS(0.286)ES(0.714)PFRETEPLVS(1)PHQDK 162.07 7.2476000000000005e-09 2090820000.0 853160.0 876410.0 724600.0 816090.0 781480.0 859710.0 767220.0 911080.0 1128790.0 830620.0 True False 805833.5140677053 834305.948081771 771308.8754009915 893650.9482335955 842978.029987036 854344.2309967687 844778.0849456297 907919.6761276704 923830.1904802644 823261.353012582 0.978830733543968 1.0134156608090168 0.9368943077171308 1.0855009104501685 1.0239494747352154 1.037755784199567 1.026135967459557 1.1028328644424956 1.1221590654045257 1.0 19.650990976577223 -5.559976750268835 0.7184247855114384 1.0699191917934288 0.9738340587777138 0.3242707754494305 0.04455395166920074 1.0048195968436648 1.0438443974835372 0.025459236199405134 0.05978750184547583 2.754376153498507e-06 5.559976750268835 -0.09608513301571497 KSES(ph)PFRETEPLVSPHQDK ddPTM_KYSE-520_SHP099_60min_R1 2 KSESPFRETEPLVSPHQDK 19 2 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 KS(0.005)ES(0.995)PFRETEPLVSPHQDK;KS(0.018)ES(0.86)PFRET(0.122)EPLVSPHQDK 189.09 5.5497e-13 1407590000.0 540130.0 648010.0 604050.0 970700.0 509630.0 459950.0 434640.0 396890.0 558400.0 382940.0 True False 510167.91217753984 616878.6269171595 642988.0295141714 1062955.0361484038 549734.9816019523 457079.2814402108 478577.6528776214 395513.2812248221 457008.6361184809 379547.449522812 1.3441479130447356 1.6253004141978387 1.694091292992672 2.80058537472669 1.4483959312415602 1.2042744115785158 1.2609165296178797 1.0420654432590266 1.2040882811702658 1.0 18.533920731387372 -5.992582449088129 24.999185689286275 1.171649141022717 1.8725467530456965 0.4734696929398142 0.35913491279006515 171.91910517285552 579409.5762941247 0.11694472648628436 0.13234551323354865 1.0172262314751473e-06 5.992582449088129 0.7008976120229795 KSFT(ph)PDHVVYAR ddPTM_KYSE-520_SHP099_60min_R1 2 KSFTPDHVVYAR 12 1 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 1 KS(0.006)FT(0.994)PDHVVYAR;KS(0.226)FT(0.774)PDHVVYAR 151.8 1.112e-05 5163200000.0 2995800.0 3177200.0 3212800.0 3791300.0 2671200.0 2611600.0 2445200.0 2517700.0 3332200.0 2370400.0 True False 2829617.002020757 3024562.542925576 3419902.2286617546 4151624.0121040926 2881408.242951035 2595300.03567617 2692384.678852293 2508966.6863356 2727156.4779262245 2349400.1001432915 1.204399796291903 1.287376527625544 1.4556491371789644 1.7670996148552485 1.2264442496513455 1.104664988955215 1.145988151906558 1.0679180128504193 1.1607884403171231 1.0 21.16386099290827 -5.9902707585541 24.99913499567487 1.1101718645714642 1.43000908159087 0.5467804086840207 0.1425936298429119 175.58995739025676 451172.34466362617 0.04727959404301331 0.05354753540758118 1.0226552246068502e-06 5.9902707585541 0.3198372170194057 KSFTPDHVVY(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 2 KSFTPDHVVYAR 12 1 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 1 KSFTPDHVVY(1)AR;KSFTPDHVVY(1)AR 123.26 0.001091 1252000000.0 1656990.0 1767990.0 1705080.0 2052280.0 1678060.0 1443700.0 1457510.0 1418100.0 1914470.0 1441110.0 True False 1565073.461572327 1683053.106592907 1814992.18502446 2247328.074159518 1810113.7751446553 1434689.3327866753 1604849.334726814 1413180.942087027 1566850.5078612978 1428342.8865666133 1.095726716807041 1.1783256824546904 1.2706978149954293 1.5733813605229936 1.267282381680582 1.0044432231782365 1.123574283052215 0.9893849406734317 1.0969708482447256 1.0 20.445910922198333 -6.230195413897651 7.989473058043564 1.0472600705207828 1.2881661582302406 0.48164149670458023 0.12118666963378602 0.263550960502016 60.62234220102913 0.043683145253894926 0.043169646808480455 5.88578760555884e-07 6.230195413897651 0.24090608770945776 KSFVES(ph)VEEIPFADDVEDTYDDKTEDSSLQEK ddPTM_KYSE-520_SHP099_60min_R1 1 KSFVESVEEIPFADDVEDTYDDKTEDSSLQEK 32 2 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 KS(0.212)FVES(0.788)VEEIPFADDVEDTYDDKTEDSSLQEK 191.08 1.4673e-15 95410000.0 278200.0 275830.0 220480.0 244420.0 263850.0 246100.0 223300.0 235100.0 325260.0 242370.0 True False 262767.69142204936 262578.7127707293 234692.49358047283 267649.6033124471 284613.4938988582 244563.99861384035 245873.3431979866 234284.49297275243 266200.98313735146 240222.79036100666 1.0938499674704563 1.0930632866936822 0.9769784674791976 1.1141724018367425 1.184789725700635 1.0180715919847143 1.023522134717061 0.9752800415841888 1.1081420823449133 1.0 17.87401350300361 KSGIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KSGISPK 7 1 Q86U86-8;Q86U86;E7EVG2;Q86U86-6;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;H0Y5B5 Q86U86-8 PBRM1 Protein polybromo-1 1 KS(0.018)GIS(0.982)PK;KSGIS(1)PK 130.63 0.0021436999999999997 5284000000.0 7991700.0 5505100.0 4968700.0 6449700.0 7254800.0 7623500.0 7869900.0 4950900.0 7007200.0 9689700.0 True False 7548384.4699410265 5240626.732676438 5288990.352201086 7062677.548826979 7825711.485834519 7575918.9087062515 8665466.294822369 4933726.483448745 5734869.117137218 9603856.79647253 0.7859742840723662 0.545679391492104 0.550715245373475 0.7354001312702914 0.814850913719255 0.7888413029532952 0.9022902442699031 0.5137234538171048 0.5971422980029876 1.0 23.195182460964222 -5.384597984512582 6.48218005658617 0.7545548353374308 0.6199600160592578 0.15785474254160914 0.14408659035523683 0.4790831524718069 23.31176739012811 0.0419342102407667 0.06244870471363583 4.1247916402643014e-06 5.384597984512582 -0.13459481927817307 KSHEAEVLK ddPTM_KYSE-520_SHP099_60min_R1 3 KSHEAEVLK 9 1 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 0 ;; 94.29700000000001 0.006944800000000001 1344430000.0 5039890.0 4680040.0 3387980.0 3044310.0 4642390.0 4595620.0 3446700.0 4411720.0 4183080.0 3427780.0 False True 4760317.25492837 4455203.85351674 3606374.6117596626 3333640.307094827 5007719.681414142 4566937.0309213195 3795126.07255038 4396416.773023192 3423538.1188655 3397412.5359724844 1.401159619129316 1.3113520381596726 1.061506241463068 0.981229177145129 1.4739804567126904 1.344239765576207 1.1170636572293842 1.2940485520887 1.0076898470869795 1.0 21.6960049796125 -7.770033324832818 24.484078636358927 1.0038446183356562 1.2414369963614327 0.3082340732979244 0.14608003745720546 213.68255607888022 608749.3597671519 0.14014819445742177 0.03857110161910482 1.6981133456839532e-08 7.770033324832818 0.23759237802577649 KSHHANS(ph)PTAGAAK ddPTM_KYSE-520_SHP099_60min_R1 2 KSHHANSPTAGAAK 14 1 Q15555-4;Q15555-5;Q15555-3;Q15555;K7EL66;K7ERD8;Q15555-2 Q15555-4 MAPRE2 Microtubule-associated protein RP/EB family member 2 1 KS(0.017)HHANS(0.979)PT(0.004)AGAAK;KS(0.044)HHANS(0.956)PTAGAAK 156.67 4.0304000000000004e-07 312140000.0 826880.0 807830.0 618960.0 583850.0 804770.0 828130.0 615110.0 626390.0 769920.0 758000.0 True False 781011.3180555856 769020.6342224486 658859.1519710161 639338.9284590973 868100.8204850631 822961.3334907737 677291.321695089 624217.1992905254 630121.9361037619 751284.7097150758 1.0395677004417987 1.0236074610304515 0.8769766553892571 0.8509941972618691 1.1554884709610154 1.0954054073626511 0.9015108559203224 0.830866369591442 0.8387258890743766 1.0 19.51900021500544 -6.94429276680085 10.120343568150087 0.8741136366283809 1.001404623938606 0.24969270613748507 0.09571013620673592 0.6018252476006075 105.42062969984683 0.04332542534096458 0.02918568318296005 1.1368606464139705e-07 6.94429276680085 0.12729098731022515 KSIKPSDS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 KSIKPSDSPR 10 2 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 KSIKPS(0.002)DS(0.998)PR 112.08 0.00049187 3736500000.0 7674800.0 6772800.0 6687000.0 6991800.0 6808700.0 6613900.0 6426500.0 6432000.0 7901200.0 6325700.0 True False 7249063.544665512 6447424.521819937 7118054.719578299 7656298.569838676 7344505.953796299 6572620.196798368 7076153.33659588 6409688.893240091 6466541.2530432325 6269659.219320127 1.1562133269264976 1.0283532639145716 1.1353176417697182 1.2211666219825126 1.1714362291277336 1.0483217614993585 1.1286344423298988 1.0223344952287772 1.0314023500856966 1.0 22.5799555983231 -7.22235473488089 1.1650463497509305 1.0041764828873614 1.1340490100925251 0.4691677090512576 0.05315671561106766 0.4933411153877533 1.188381532993807 0.04839941288142671 0.01924159114996271 5.993013625847824e-08 7.22235473488089 0.12987252720516373 KSIRDT(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 5 KSIRDTPAK 9 2 P06748;P06748-3 P06748 NPM1 Nucleophosmin 1 KS(0.002)IRDT(0.998)PAK;KS(0.001)IRDT(0.999)PAK;KS(0.029)IRDT(0.971)PAK;KS(0.002)IRDT(0.998)PAK;KSIRDT(1)PAK 100.22 0.005713899999999999 11279140000.0 13828030.0 13735570.0 12127040.0 11805380.0 12674820.0 11297230.0 11124850.0 11250080.0 14863030.0 12519530.0 True False 13060961.610405594 13075692.599689107 12908768.402350036 12927359.765783085 13672256.224139206 11226719.797075322 12249458.40607309 11211056.098268416 12164278.418495812 12408616.704246948 1.0525719281775685 1.053759086233508 1.040306805345346 1.0418050677122288 1.101835647760783 0.9047519207546227 0.9871735664041114 0.9034895964214402 0.9803089827355608 1.0 23.5648389589581 -6.2612884543908045 24.99999973067765 0.9511147096981708 1.0559281428934544 0.695856898067409 0.033951346074884335 7.329306391498209 1214175.7480266273 0.010808395888190167 0.01016381990626175 5.479129253249707e-07 6.2612884543908045 0.10481343319528358 KSLDFYTR ddPTM_KYSE-520_SHP099_60min_R1 1 KSLDFYTR 8 1 Q04760-2;Q04760 Q04760-2 GLO1 Lactoylglutathione lyase 0 78.513 0.031598 465160000.0 478820.0 423410.0 352550.0 270940.0 411680.0 403080.0 272660.0 293940.0 372980.0 326980.0 False True 452258.9000959947 403068.7480486327 375275.9370999439 296690.0561389186 444076.8738612162 400564.2282050658 300223.1337051635 292920.390746112 305256.2340606576 324083.21158659057 1.3955024016267419 1.2437199263589076 1.1579616705929716 0.9154749321522542 1.3702557182372435 1.2359919115959532 0.9263766926876063 0.90384314976417 0.9419069644682825 1.0 18.306004761405106 -6.763487470401114 24.995933530708587 0.9350185761684258 1.2110969241251366 0.5391497967008082 0.12512125467081076 45.85833037455814 559662.9563661895 0.05320012836847307 0.037894724607186764 1.7239018256833184e-07 6.763487470401114 0.2760783479567108 KSLDS(ph)DES(ph)EDEEDDYQQK ddPTM_KYSE-520_SHP099_60min_R1 8 KSLDSDESEDEEDDYQQK 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 2 KS(0.416)LDS(0.584)DES(1)EDEEDDYQQK;KS(0.297)LDS(0.703)DES(1)EDEEDDYQQK;KS(0.006)LDS(0.994)DES(1)EDEEDDYQQK;KS(0.007)LDS(0.993)DES(1)EDEEDDYQQK;KS(0.105)LDS(0.895)DES(1)EDEEDDYQQK;KS(0.458)LDS(0.545)DES(0.997)EDEEDDYQQK;KS(0.045)LDS(0.955)DES(1)EDEEDDYQQK;KS(0.014)LDS(0.986)DES(1)EDEEDDYQQK 262.71 5.4976999999999996e-30 21709680000.0 13037870.0 12131030.0 11795300.0 11524190.0 11718820.0 11265590.0 11849990.0 11764480.0 14479920.0 10588260.0 True False 12314633.360750515 11548237.109752728 12555643.911147283 12619445.55272593 12641024.463035135 11195277.274051582 13047902.633957507 11723671.764730277 11850731.537078656 10494456.253941633 1.173441773710309 1.1004130971926538 1.1964072846967642 1.2024868413726693 1.2045430613222357 1.066780117344977 1.2433138333448024 1.1171299856842951 1.129237308757909 1.0 23.323124082860275 -8.3292367665888 1.1523239180514377 1.000211459636135 1.1665792738594225 0.4897318989297308 0.050560026422734855 0.9587805360875853 2.173547005909811 0.047208256673039725 0.014645648498931936 4.685578663642695e-09 8.3292367665888 0.1663678142232876 KSLDS(ph)DES(ph)EDEEDDYQQKR ddPTM_KYSE-520_SHP099_60min_R1 6 KSLDSDESEDEEDDYQQKR 19 2 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 2 KS(0.059)LDS(0.941)DES(1)EDEEDDYQQKR;KS(0.018)LDS(0.983)DES(1)EDEEDDYQQKR;KS(0.461)LDS(0.539)DES(1)EDEEDDYQQKR;KS(0.015)LDS(0.986)DES(0.999)EDEEDDYQQKR;KS(0.016)LDS(0.984)DES(1)EDEEDDYQQKR;KS(0.022)LDS(0.978)DES(1)EDEEDDYQQKR 102.95 0.00022392 5160800000.0 9064360.0 9786010.0 9636810.0 7051760.0 7735100.0 7901120.0 6331960.0 6635650.0 11537540.0 7026360.0 True False 8561541.881446315 9315875.390499528 10258014.192041172 7721957.150211052 8343808.363301332 7851806.179308345 6972056.3107743915 6612632.478922355 9442613.573714936 6964111.916825368 1.2293802833296719 1.337697541590662 1.4729823866353584 1.108821518441529 1.1981152030516056 1.1274669725422273 1.0011407619584387 0.9495298981261581 1.3558962989812788 1.0 22.731507957343567 -5.284347587265263 23.216411452363488 1.1041318045695225 1.3457877844099002 0.45151655416511505 0.12162719036645682 277.7798795868193 281516.3879959994 0.0343461559948484 0.05099723055509697 5.195799846244397e-06 5.284347587265263 0.24165597984037768 KSLESINSR ddPTM_KYSE-520_SHP099_60min_R1 1 KSLESINSR 9 1 E5RI99;P62888;E5RJH3;A0A0C4DH44 E5RI99 RPL30 60S ribosomal protein L30 0 120.77 0.0018361 441770000.0 404580.0 349990.0 309230.0 170100.0 266610.0 338500.0 174320.0 274390.0 371190.0 267510.0 False True 382137.1408897648 333175.9550542996 329163.4605854933 186266.25285757036 287590.6901966065 336387.2959398004 191941.96679925223 273438.20513310743 303791.2529384294 265140.06951963104 1.4412651455591148 1.2566035592354372 1.2414700696950747 0.7025201931757779 1.0846745673622644 1.2687154248290418 0.7239266669387397 1.0312971767281747 1.145776470108139 1.0 18.016395189639695 -5.022609915559404 20.858631886005966 0.9970511755616019 1.3239608757682901 0.43663099789503623 0.1686483967906215 84.47618228828284 77934.80988295042 0.04596119024951177 0.08080104394170265 9.492707179388977e-06 5.022609915559404 0.3269097002066882 KSLGTPTVICT(ph)PTEESVFFPGNGESDR ddPTM_KYSE-520_SHP099_60min_R1 3 KSLGTPTVICTPTEESVFFPGNGESDR 27 1 E9PPJ1;Q8NG31-3;Q8NG31-4;Q8NG31-2;Q8NG31;H0YCZ2 E9PPJ1 CASC5 Protein CASC5 1 KS(0.003)LGT(0.002)PT(0.002)VICT(0.986)PT(0.006)EESVFFPGNGESDR;KSLGT(0.001)PT(0.002)VICT(0.934)PT(0.063)EESVFFPGNGESDR;KS(0.001)LGT(0.001)PT(0.003)VICT(0.918)PT(0.074)EES(0.003)VFFPGNGESDR 140.24 3.8499e-06 1068840000.0 162877.0 224140.0 191717.0 175151.0 174921.0 388080.0 356680.0 428300.0 508970.0 459390.0 True False 153841.88812275013 213371.97795900106 204075.38457804572 191797.29837893185 188686.2875356534 385657.84876903356 392736.6952613429 426814.32726597163 416553.87808958354 455320.16200001223 0.33787629224893845 0.4686196565988996 0.4482019502093567 0.4212361199566794 0.414403541250713 0.847003671164079 0.8625506358783479 0.9373938667489979 0.914859285518686 1.0 18.79652181908584 -6.310609365992939 3.7352665144487047 0.9159446333012208 0.41972418647101567 0.9661206902747681 0.04641171307167887 0.040652353948474856 1.1797793423620655 0.01715869169043241 0.015406491993412413 4.89092084253059e-07 6.310609365992939 -0.4962204468302051 KSLPAPVAQRPDS(ph)PGGGLQAPGQK ddPTM_KYSE-520_SHP099_60min_R1 2 KSLPAPVAQRPDSPGGGLQAPGQK 24 2 Q5JVS0-2;Q5JVS0 Q5JVS0-2 HABP4 Intracellular hyaluronan-binding protein 4 1 KSLPAPVAQRPDS(1)PGGGLQAPGQK;KSLPAPVAQRPDS(1)PGGGLQAPGQK 234.83 1.6094e-28 1931940000.0 1809830.0 1767090.0 1611940.0 1264310.0 1384120.0 1576700.0 1206990.0 1479710.0 1953540.0 1679710.0 True False 1709435.1220933388 1682196.3439438345 1715848.231595189 1384469.6422713385 1493042.369434481 1566859.2304528314 1329004.3282872285 1474577.231376911 1598826.3807358488 1664829.076194606 1.0267931684618887 1.0104318623440467 1.0306452813265374 0.8315986680361801 0.896814208006994 0.9411532107754209 0.7982827470343135 0.8857228963993322 0.9603546715981058 1.0 20.666942636359803 -5.245727244322857 24.806710843791404 0.894323011360367 1.021404297287092 0.4914451437437233 0.05585154552075963 583.785965694565 921694.219703745 0.014836845615706805 0.025589973284783088 5.679011598678976e-06 5.245727244322857 0.12708128592672507 KSLPEEDVAEIQHAEEFLIKPESK ddPTM_KYSE-520_SHP099_60min_R1 1 KSLPEEDVAEIQHAEEFLIKPESK 24 2 O60832;H7C2Q9;H7C0M1;C9IYT0;O60832-2 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 0 116.08 0.00035092 40708000.0 69402.0 53789.0 44566.0 44502.0 73435.0 40642.0 37596.0 52367.0 43272.0 36764.0 False True 65552.13271054295 51204.89570106497 47438.7956681212 48731.45669998582 79213.91671200558 40388.33820261559 41396.570581601 52185.35109954968 35414.8955983505 36438.29956195921 1.7989898952084455 1.4052493205396928 1.3018937831458597 1.3373691222095445 2.1739191363008383 1.108403484469405 1.1360730626633884 1.4321565969568473 0.9719140581225936 1.0 15.153168015122755 KSLS(ph)DS(ph)ES(ph)DDSK ddPTM_KYSE-520_SHP099_60min_R1 1 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 3 KS(0.03)LS(0.996)DS(0.971)ES(0.789)DDS(0.214)K 104.2 0.00032661 0.0 550100.0 470790.0 505310.0 524890.0 524060.0 481920.0 437230.0 468620.0 650860.0 512490.0 True False 519584.856402837 448172.5417298033 537883.0911245856 574775.3877860676 565300.5405064828 478912.15852085245 481429.47535358585 466994.4665967308 532680.2308454053 507949.73731118685 1.0229060441161761 0.8823167112994055 1.0589297554751183 1.1315595728597476 1.1129064531047508 0.9428337556703076 0.947789594108297 0.9193714107792411 1.0486868910792795 1.0 18.95432622080538 -6.291798231009903 24.96223359038495 0.9652003681070744 1.038814559364179 0.19240447293871088 0.07094028367560921 1251.521494687748 1029046.1377889416 0.027532359317067347 0.024285234469093215 5.107422307338659e-07 6.291798231009903 0.07361419125710467 KSLS(ph)DS(ph)ESDDSK ddPTM_KYSE-520_SHP099_60min_R1 3 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 KSLS(0.996)DS(0.965)ES(0.039)DDSK;KS(0.007)LS(0.993)DS(0.964)ES(0.035)DDS(0.001)K;KS(0.057)LS(0.941)DS(0.96)ES(0.042)DDSK 152.11 4.1893e-05 5122520000.0 7024600.0 6425900.0 6255300.0 6266900.0 6349900.0 6317000.0 6468200.0 6316800.0 7687200.0 6171500.0 True False 6634931.434807077 6117190.118527455 6658526.646833867 6862504.291787803 6849601.004011209 6277573.2598278215 7122068.77954867 6294888.495152204 6291398.258542242 6116825.3113543475 1.0847018015196537 1.0000596399528414 1.0885592293234183 1.1219062082824713 1.1197967336580052 1.0262796369507374 1.1643407187595076 1.0291103921943507 1.0285397961036822 1.0 22.54435164447758 -7.492906641514275 24.82908637733111 1.01912157919996 1.0845351643367065 0.3238744593166658 0.044731732441335555 756.9576005092503 627071.8675403387 0.024766080131331532 0.011865962203949317 3.214351440191293e-08 7.492906641514275 0.06541358513674655 KSLS(ph)DSESDDS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 KS(0.004)LS(0.897)DS(0.111)ES(0.003)DDS(0.985)K;KS(0.006)LS(0.993)DS(0.001)ES(0.102)DDS(0.897)K 189.45 4.463e-08 4751800000.0 4264400.0 3740690.0 3496920.0 3630620.0 3762610.0 3608890.0 3673010.0 3816680.0 4390600.0 3579710.0 True False 4027845.2311293567 3560981.6375098363 3722337.0584698273 3975673.0332142953 4058706.0006775917 3586365.5788602224 4044313.695923143 3803440.8278998067 3593377.7180189844 3547996.5543722357 1.135244966956295 1.0036598353292083 1.049137732076642 1.1205402745713011 1.1439430502478936 1.0108142789599681 1.1398865906279674 1.0719967648257112 1.012790644791023 1.0 21.758573177894238 -7.762312501994142 4.056436161842974 1.002042770764918 1.083706199491083 0.2946013360959 0.04873090568773614 0.26980297625238614 9.490859672004964 0.04301359497467938 0.012494006142259756 1.7285720960628003e-08 7.762312501994142 0.08166342872616505 KSLS(ph)DSESDDSK ddPTM_KYSE-520_SHP099_60min_R1 3 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KS(0.017)LS(0.965)DS(0.017)ESDDSK;KS(0.087)LS(0.752)DS(0.16)ES(0.001)DDSK;KSLS(0.478)DS(0.478)ES(0.04)DDS(0.003)K 216.01 1.6822e-11 8077000000.0 20655500.0 18867000.0 18785600.0 17545200.0 18681100.0 18875700.0 18229500.0 18620600.0 21768100.0 18426800.0 True False 19509698.239281606 17960601.000055633 19996549.834022745 19212690.532843255 20151196.28908078 18757889.754714604 20072315.762775164 18556009.48468073 17815561.769145254 18263552.887833476 1.0682312668899308 0.9834122150471797 1.0948882704713896 1.0519689488041541 1.1033557606693702 1.0270668511169279 1.099036747452716 1.0160131272728472 0.9754707574457401 1.0 24.122464110533688 -7.490801265367912 6.514457416292332 0.9898964086358226 1.0594204478451004 0.4304996258359294 0.03468389928960369 0.16935600362133163 24.336526859965478 0.019658173607156163 0.008807881204345114 3.229971829680143e-08 7.490801265367912 0.06952403920927774 KSLSDS(ph)ESDDSK ddPTM_KYSE-520_SHP099_60min_R1 7 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KSLS(0.132)DS(0.868)ESDDSK;KSLS(0.213)DS(0.786)ES(0.001)DDSK;KSLS(0.088)DS(0.91)ES(0.001)DDSK;KSLS(0.015)DS(0.981)ES(0.004)DDSK;KSLS(0.214)DS(0.78)ES(0.006)DDSK;KSLS(0.002)DS(0.997)ES(0.001)DDSK;KSLS(0.193)DS(0.806)ES(0.001)DDSK 294.26 9.274299999999999e-30 52386610000.0 16266300.0 14409210.0 14322830.0 12972860.0 13558110.0 13278670.0 13792170.0 13193270.0 15713660.0 12794340.0 True False 15363975.912934871 13716969.922934853 15246102.539138254 14205796.713967413 14625056.12190655 13195792.895057444 15186417.142207677 13147505.625702359 12860455.453133117 12680992.101445887 1.2115752292900703 1.0816953289775209 1.2022799491689529 1.1202433216836138 1.1533053569396199 1.0405962553634 1.1975732671954051 1.0367884090238713 1.0141521538891873 1.0 23.596164283809163 -7.406674632846027 5.51486036867952 1.0127376934579868 1.1389754718545715 0.5629000965171689 0.05145510735658253 0.1659677902998257 6.811924439870342 0.027597324874268626 0.012787347175132054 3.9203547443047197e-08 7.406674632846027 0.12623777839658468 KSLSDSES(ph)DDSK ddPTM_KYSE-520_SHP099_60min_R1 1 KSLSDSESDDSK 12 1 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 KSLS(0.301)DS(0.264)ES(0.431)DDS(0.004)K 209.21 1.4613e-10 1091500000.0 1426100.0 1239800.0 1402000.0 1262700.0 1307800.0 1201400.0 1219600.0 1247000.0 1588200.0 1208300.0 True False 1346991.3901401307 1180238.1470222608 1492375.1632793138 1382706.6283554018 1410716.4196358793 1193901.6169632988 1342889.070148968 1242674.4480519884 1299822.915263919 1197595.4020431745 1.1247466279864444 0.9855065784393452 1.2461430302197438 1.154569085683208 1.1779574447506285 0.9969156652792972 1.121321163940604 1.0376412984985632 1.0853606427064915 1.0 20.19170915687001 -6.254236399102978 24.988574292168046 1.055167422796673 1.1362770546253098 0.28753821728290374 0.0700277821955405 840.6641848926852 2916431.919701487 0.023744718625374757 0.023254289797839302 5.568825390727077e-07 6.254236399102978 0.08110963182863684 KSLSGS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 1 KSLSGSPLK 9 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 KS(0.008)LS(0.112)GS(0.879)PLK 65.895 0.019686000000000002 0.0 898720.0 699350.0 684760.0 638470.0 672480.0 697430.0 644670.0 628660.0 848480.0 606140.0 True False 848866.2100460967 665752.1762542484 728900.7252547381 699149.9968369942 725400.3501121998 693077.080671477 709839.5349728895 626479.3251903466 694417.4204402015 600770.0711697843 1.4129635459257053 1.1081646842991608 1.213277358899496 1.1637563693471784 1.207450878336437 1.1536478162468344 1.1815494297023343 1.042793832872704 1.1558788524336316 1.0 19.19645341769774 -1.0000000000012028 0.09641180663265601 0.9149425722495225 1.952308364669544 0.5321012745950644 0.07222434940753834 113.85992417137906 0.7837788577911311 1.008909086076101 15.614038996397447 0.09999999999972305 1.0000000000012028 1.0373657924200215 KSMDS(ph)IGK ddPTM_KYSE-520_SHP099_60min_R1 3 KSMDSIGK 8 1 E7EVQ3;O15123-2;O15123-3;O15123 E7EVQ3 ANGPT2 Angiopoietin-2 1 KS(0.112)MDS(0.888)IGK;KS(0.061)MDS(0.939)IGK;KS(0.125)MDS(0.875)IGK 68.626 0.029411 2899600000.0 5296040.0 4263710.0 4031090.0 4541780.0 4627890.0 4629800.0 4629460.0 4648930.0 4984710.0 4937860.0 True False 5002258.103806 4058874.971640815 4290940.511372046 4973429.405664048 4992078.613907856 4600903.700862892 5097450.995975595 4632803.9468984185 4079612.3183133146 4894114.401996942 1.0220966844920774 0.8293379840047619 0.8767552531304164 1.0162062013987134 1.020016739263582 0.9400891198999329 1.0415471681445954 0.946607203339607 0.8335751850526243 1.0 22.222616394743238 -5.25184229695358 24.706281829499638 0.9725993789111494 0.9013907740484867 0.13247997933690103 0.07147252823995381 1076.9184447959294 2772362.274134629 0.0195753911435538 0.033364450993082787 5.599609002063178e-06 5.25184229695358 -0.07120860486266278 KSMY(ph)S(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 KSMYSR 6 1 B0QY89;Q9Y262-2;Q9Y262;B0QY90 B0QY89 EIF3L Eukaryotic translation initiation factor 3 subunit L 2 KS(0.184)MY(0.816)S(1)R 52.937 0.056158000000000007 0.0 340470.0 295540.0 310930.0 335730.0 327610.0 304090.0 289530.0 354600.0 371750.0 328490.0 True False 321583.4503898815 281341.8147854159 330973.04530559026 367637.6782590944 353391.0431540834 302192.06151354185 318798.5179404973 353369.97536426206 304249.5710548807 325579.8341613532 0.9877253338439532 0.8641254318164758 1.0165649422303111 1.1291782834341575 1.085420551504266 0.9281657824169152 0.979171571733478 1.0853558429823895 0.9344853063107665 1.0 18.312651818830954 -4.861291068417126 8.487308693579642 1.0248271816451064 0.9263742732330761 0.23223986740498948 0.0678897721063723 0.3300670843837773 24.802558351496213 0.018307406763207586 0.03835234197830905 1.3762867588527553e-05 4.861291068417126 -0.09845290841203036 KSNFAEALAAHK ddPTM_KYSE-520_SHP099_60min_R1 1 KSNFAEALAAHK 12 1 H7BZ94;P07237;I3L312;I3L0S0;I3L3U6;I3L1Y5;I3L514;I3L3P5;I3NI03 H7BZ94 P4HB Protein disulfide-isomerase 0 64.104 0.06476900000000001 447960000.0 1120200.0 1124500.0 871440.0 841040.0 1315900.0 1200300.0 805650.0 917450.0 896760.0 798940.0 False True 1058060.2729366631 1070477.3320910896 927614.4167532985 920972.1887321033 1419453.8435531827 1192808.4824713222 887092.9643862863 914267.580084439 733930.9894799584 791862.0131659152 1.3361674829008028 1.3518483199001459 1.1714344182828478 1.1630463053152371 1.7925520102651662 1.5063337584567258 1.1202620527781497 1.154579415205357 0.9268420220660103 1.0 19.59488952814438 -6.8952494773821815 5.2501725100269905 1.0502203331453595 1.3829105649194078 0.47164170821437335 0.1757216644868453 0.22094031562654362 9.409325745327559 0.08300085419938659 0.05528994016223514 1.2727717362900556e-07 6.8952494773821815 0.33269023177404833 KSNIS(ph)PNFNFMGQLLDFER ddPTM_KYSE-520_SHP099_60min_R1 1 KSNISPNFNFMGQLLDFER 19 1 Q99956;F8VW29;Q16828-2;Q16829-2;Q16828;Q16829 Q99956 DUSP9;DUSP6;DUSP7 Dual specificity protein phosphatase 9;Dual specificity protein phosphatase 6;Dual specificity protein phosphatase 7 1 KS(0.087)NIS(0.913)PNFNFMGQLLDFER 145.2 1.4367e-06 58788000.0 42251.0 45415.0 43014.0 38270.0 44283.0 37661.0 28561.0 27694.0 63327.0 30786.0 True False 39907.25280471963 43233.19523069522 45786.7512648334 41907.169293704945 47767.8201641961 37425.94372936139 31448.224608498414 27597.935977828183 51828.41314375903 30513.259991145576 1.3078659184990404 1.4168658230304056 1.5005525885506803 1.3734084560569957 1.5654774408915173 1.2265468763488974 1.0306412562153027 0.9044571437413318 1.6985537814969214 1.0 14.897148703084836 -6.446881408057218 5.964137877050648 1.147283905301538 1.4310728159389254 0.28223639977356774 0.20975870345218142 0.2923996236384345 17.911851430132423 0.07294704869437256 0.06360284690000657 3.5737041126688863e-07 6.446881408057218 0.2837889106373874 KSNLDEEVNVIPPHT(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 17 KSNLDEEVNVIPPHTPVR 18 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR;KSNLDEEVNVIPPHT(1)PVR 176.57 2.7823e-09 75238410000.0 54752240.0 54149590.0 50261410.0 44118250.0 44131180.0 51519800.0 43590470.0 49725710.0 61443160.0 52468910.0 True False 51715024.101315565 51548162.41620833 53501340.90969931 48311235.21536444 47604052.79393371 51198245.817900494 47997020.10959037 49553223.11807792 50286631.000017226 52004076.27759434 0.9944417400140744 0.9912331129784446 1.0287912936692245 0.9289893922446049 0.9153907962873219 0.9845044750839842 0.9229472676985055 0.9528719028401941 0.9669747950447287 1.0 25.63212137583034 -5.264481677435249 24.998382243186086 0.9496145968074586 1.0034631555851476 0.43268127874699247 0.026922609293320948 229.7899534128229 1888172.5038755862 0.007292507821170742 0.01139948142569042 5.4389907793840156e-06 5.264481677435249 0.053848558777689015 KSPAKS(ph)PNPSTPR ddPTM_KYSE-520_SHP099_60min_R1 1 KSPAKSPNPSTPR 13 2 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 KS(0.475)PAKS(0.504)PNPS(0.021)TPR 73.464 0.014182 2812700000.0 364580.0 355250.0 394610.0 342070.0 343850.0 355390.0 359760.0 365830.0 560840.0 324730.0 True False 344356.0206277884 338183.2567588792 420047.1919983241 374580.2299529048 370909.03876112314 353171.8791847727 396128.0517192459 364561.021115364 459005.5936258757 321853.1448361173 1.0699165944242341 1.0507377733751115 1.3050895998304002 1.1638234268104957 1.152417009782472 1.097307529384566 1.2307726616154342 1.1326936740077307 1.4261336295458427 1.0 18.296043039967067 -6.776164589028521 24.979123195671843 1.2084578027870243 1.1449974307953854 0.04954902584007381 0.11828393801013627 762.6159022468465 1293651.2730623635 0.04804034397999634 0.03253949113766376 1.674308226034862e-07 6.776164589028521 -0.0634603719916389 KSPLS(ph)SILFSALDSDTR ddPTM_KYSE-520_SHP099_60min_R1 2 KSPLSSILFSALDSDTR 17 1 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;A0A1W2PRR3;I3L233;A0A1W2PPV8 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 KS(0.488)PLS(0.51)S(0.002)ILFSALDSDTR;KS(0.229)PLS(0.262)S(0.173)ILFS(0.105)ALDS(0.188)DT(0.043)R 269.44 6.9905e-30 719280000.0 172430.0 174722.0 170999.0 173591.0 170620.0 177882.0 176480.0 189996.0 218463.0 146152.0 True False 162864.96416931672 166328.09285693133 182021.8691480738 190089.03644796292 184046.82330499595 176771.7724560224 194320.32067882066 189336.94822139965 178795.62620406813 144857.20698453544 1.1243138505818613 1.1482210400114097 1.2565606705885608 1.312251149977345 1.2705396378700322 1.2203174155835688 1.341461185977207 1.3070592217176515 1.2342887863574221 1.0 17.144271938280166 -4.733612721560356 4.575666777474644 1.2604227054809898 1.1312832678887317 0.16284800075319728 0.09040210071840746 0.2595242163480165 12.637250531112267 0.021856576502013007 0.05815593372098977 1.84666142991023e-05 4.733612721560356 -0.1291394375922581 KSPQPVPLS(ph)PCPR ddPTM_KYSE-520_SHP099_60min_R1 1 KSPQPVPLSPCPR 13 1 Q13356-2 Q13356-2 1 KS(0.003)PQPVPLS(0.997)PCPR 58.023999999999994 0.030926 337570000.0 441760.0 411080.0 361920.0 334800.0 355330.0 398850.0 324740.0 411740.0 445390.0 393330.0 True False 417254.69217327284 391331.09975634044 385249.94229247456 366619.29133871 383292.44944885804 396360.6292041048 357567.8883569824 410311.7700408388 364518.4033682136 389845.4022061099 1.0703081011397224 1.0038109915926239 0.9882120966731173 0.9404222526776901 0.9831908938256829 1.0167123350977738 0.9172043233895509 1.0524986769599207 0.9350332242099755 1.0 18.572542594081433 -4.2616565886680515 2.0312361884740984 0.978875168047644 1.0966989977677757 0.3426382264778235 0.03818618086447908 0.7939889719276216 3.559672652920398 0.009536897404814896 0.17360808614419185 5.4744867797114587e-05 4.2616565886680515 0.11782382972013172 KSPS(ph)AGDVHILTGFAK ddPTM_KYSE-520_SHP099_60min_R1 1 KSPSAGDVHILTGFAK 16 1 A0A3B3ITL0;Q9Y2H2;A0A3B3IRJ9;Q9Y2H2-4 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 KS(0.369)PS(0.631)AGDVHILTGFAK 174.63 1.5107e-08 513850000.0 1027300.0 913900.0 939730.0 879140.0 900340.0 881680.0 803490.0 741630.0 1271400.0 802570.0 True False 970313.6211282224 869994.8722081333 1000306.4994211609 962693.2012769211 971191.6357661476 876177.1080774105 884714.6105067182 739057.4586277436 1040545.8093858113 795459.8541900122 1.2198146971430224 1.093700540166188 1.2575197782165093 1.210234804693188 1.2209184796070904 1.1014724419620017 1.112205230529944 0.9290946045043328 1.308106001710622 1.0 19.60142959591396 -6.350284211446598 4.597935509233683 1.0848123287042963 1.1981175743090908 0.23707914280875264 0.09886693238618095 0.33953415269564446 12.504882337092825 0.033985443705444 0.02988488120455161 4.4639136863898593e-07 6.350284211446598 0.11330524560479449 KSPS(ph)DTEGLVK ddPTM_KYSE-520_SHP099_60min_R1 1 KSPSDTEGLVK 11 1 O95297-4;O95297-2;O95297 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 KS(0.001)PS(0.987)DT(0.013)EGLVK 90.70700000000001 0.0030646000000000002 391460000.0 193880.0 195690.0 148700.0 227140.0 244390.0 266370.0 234100.0 276870.0 388670.0 232830.0 True False 183125.0899098018 186288.7586633216 158285.43992841232 248727.31730786854 263622.1026111121 264707.4860250653 257765.11259582924 275909.6025919439 318097.32557337044 230767.30733899877 0.7935486703963217 0.8072580159271093 0.6859092899840007 1.0778273585455775 1.1423719661635148 1.1470753334925738 1.1169914645542511 1.1956182432142817 1.3784332332052707 1.0 17.816079327186678 -5.389152315256748 3.997782317630218 1.1663356185809854 0.7676804877167627 0.7861122293615403 0.09360429076701846 0.10338248950487329 2.825886715246281 0.02724321779975393 0.04154155946041566 4.081762061407848e-06 5.389152315256748 -0.3986551308642228 KSPS(ph)LESLSRPPSLGFGDTR ddPTM_KYSE-520_SHP099_60min_R1 5 KSPSLESLSRPPSLGFGDTR 20 2 Q5M775-4;Q5M775;J3KSG2 Q5M775-4 SPECC1 Cytospin-B 1 KS(0.01)PS(0.744)LES(0.05)LS(0.196)RPPSLGFGDTR;KS(0.03)PS(0.562)LES(0.348)LS(0.06)RPPSLGFGDTR;KS(0.01)PS(0.99)LESLSRPPSLGFGDTR;KS(0.018)PS(0.96)LES(0.018)LS(0.003)RPPS(0.001)LGFGDTR;KS(0.001)PS(0.999)LESLSRPPSLGFGDTR 121.62 3.4453000000000004e-05 9775930000.0 5218370.0 4601850.0 4246870.0 4115520.0 4616230.0 4579340.0 4089640.0 4582550.0 5443600.0 4414300.0 True False 4928896.613537304 4380770.218482325 4520630.035432252 4506657.783423795 4979501.03824417 4550758.640440072 4503060.722240093 4566654.2036252115 4455179.461988832 4375192.736273429 1.126555310963396 1.0012747969164089 1.0332413468218313 1.0300478299071096 1.1381215270725331 1.040127581743103 1.0292256807126572 1.0437606932751629 1.0182818747737115 1.0 22.06091514136428 -7.656467686316125 0.9740562183913878 1.0014614898397682 1.057938143859798 0.19725736131209104 0.04066338019460364 0.9571172599962168 1.8184673189842702 0.0386466721351877 0.01386144749663797 2.2056282400717857e-08 7.656467686316125 0.05647665402002966 KSPS(ph)SDSWTCADTSTER ddPTM_KYSE-520_SHP099_60min_R1 2 KSPSSDSWTCADTSTER 17 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 KS(0.001)PS(0.939)S(0.05)DS(0.006)WT(0.003)CADTSTER;KS(0.021)PS(0.899)S(0.079)DS(0.001)WTCADTSTER 288.53 1.6477e-37 988440000.0 820600.0 649140.0 669980.0 665540.0 710400.0 696450.0 722980.0 741280.0 857780.0 613220.0 True False 775079.6821744563 617954.3400209951 713167.9828059027 728792.7214981033 766304.4383769141 692103.1972149905 796065.8740048391 738708.6726960534 702028.7748741244 607787.3478779409 1.2752481355207677 1.0167278772395507 1.1733840549591779 1.1990916297330747 1.2608101189543148 1.1387259041035227 1.3097769750954233 1.2154064662175312 1.1550565791229823 1.0 19.213207117471196 -3.929241738725105 20.5775936605221 1.1763561590037295 4.101472970799967 0.10235719377520758 0.09243194166192951 1146.2729967753646 350219.5747831972 0.021783847969909603 7765.744846267606 0.00011769506721864108 3.929241738725105 2.9251168117962374 KSPSGPVKS(ph)PPLS(ph)PVGT(ph)TPVK ddPTM_KYSE-520_SHP099_60min_R1 1 KSPSGPVKSPPLSPVGTTPVK 21 2 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 3 KS(0.097)PS(0.12)GPVKS(0.783)PPLS(0.995)PVGT(0.706)T(0.299)PVK 69.578 0.038141 565020000.0 495840.0 503980.0 437080.0 385030.0 412980.0 551280.0 474300.0 548960.0 641040.0 585320.0 True False 468334.7667674654 479768.0443105979 465254.87615272653 421623.1354365097 445479.17646522797 547839.257033067 522246.8727219213 547055.7858882272 524643.2953033509 580134.5201720686 0.8072865007732288 0.8269944773641432 0.8019775758469455 0.7267678801658893 0.7678894480078488 0.9443314231164477 0.9002168541306975 0.9429809240208111 0.9043476591390236 1.0 19.146027942061473 -6.262919504419146 24.999599650601702 0.9324267774283265 0.7860270846386784 0.8176972289004963 0.035875486009207064 59.86265460343601 1011083.1383265929 0.0127936893304153 0.011880219602308341 5.458590255531404e-07 6.262919504419146 -0.14639969278964804 KSPSGPVKS(ph)PPLS(ph)PVGTTPVK ddPTM_KYSE-520_SHP099_60min_R1 2 KSPSGPVKSPPLSPVGTTPVK 21 2 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 2 KSPSGPVKS(0.999)PPLS(0.838)PVGT(0.141)T(0.021)PVK;KS(0.131)PS(0.144)GPVKS(0.743)PPLS(0.955)PVGT(0.02)T(0.007)PVK 120.13 7.0724e-05 3460100000.0 4118800.0 3842000.0 3428200.0 3803300.0 4168100.0 4465500.0 4685400.0 5995000.0 6956800.0 5254400.0 True False 3890321.953375758 3657424.5530404327 3649187.2573139383 4164764.4884961597 4496105.756755089 4437629.15810688 5159045.957097389 5974204.744243515 5693620.486656606 5207850.103861339 0.7470111227839094 0.7022906727535514 0.7007089652231471 0.7997089788372004 0.8633324053281545 0.8521038566022893 0.9906287343547455 1.147153743886362 1.0932765677021108 1.0 22.312256493724792 -6.496853600759573 0.9697451639430118 1.0973115711463084 0.724375286560161 0.8834023963471007 0.05195253900490338 0.17125290936770143 0.33303515693441893 0.035396646151253985 0.025713140397694963 3.1852710851675174e-07 6.496853600759573 -0.37293628458614736 KSPSGPVKS(ph)PPLSPVGT(ph)TPVK ddPTM_KYSE-520_SHP099_60min_R1 1 KSPSGPVKSPPLSPVGTTPVK 21 2 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 2 KS(0.016)PS(0.105)GPVKS(0.879)PPLS(0.014)PVGT(0.862)T(0.124)PVK 71.97399999999999 0.038475999999999996 919580000.0 1075300.0 1029400.0 986260.0 992090.0 972830.0 957930.0 772860.0 850930.0 1022800.0 888630.0 True False 1015650.965442594 979946.0788390997 1049835.897671794 1086377.9353172663 1049386.1863544674 951951.203543908 850988.2311867266 847978.3224385554 837085.3026897972 880757.4295436782 1.153156285004379 1.1126174426332247 1.1919693918627694 1.233458724134885 1.1914587957528284 1.0808324421823106 0.9662004572900679 0.9627830478567684 0.9504152614681802 1.0 19.748385213922152 -6.5612588286243305 2.7752430819594696 0.9655738253613801 1.1764548105626285 0.9031415894520254 0.0318335871697877 0.0865184953454899 1.3554766967716476 0.015049554848087688 0.011572122865909787 2.746256964981292e-07 6.5612588286243305 0.21088098520124832 KSPSGPVKS(ph)PPLSPVGTTPVK ddPTM_KYSE-520_SHP099_60min_R1 2 KSPSGPVKSPPLSPVGTTPVK 21 2 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 KS(0.226)PS(0.226)GPVKS(0.548)PPLSPVGTTPVK;KS(0.12)PS(0.435)GPVKS(0.446)PPLSPVGTTPVK 188.3 2.422e-13 14713400000.0 5435700.0 4785800.0 4189600.0 3407400.0 3260330.0 4173200.0 3539010.0 3794360.0 4837100.0 3868590.0 True False 5134170.885200692 4555882.984367744 4459668.31959701 3731238.2715278314 3516899.422259861 4147153.5108300624 3896767.668209169 3781198.250770277 3958804.573368028 3834317.30231748 1.3390052205897447 1.1881862206902245 1.1630931839943357 0.9731167186587956 0.917216585110009 1.0815885029451013 1.0162872190712917 0.9861464121617953 1.0324666065000168 1.0 21.870538299011084 -4.779657518769816 1.5034013711818446 1.0014454871158618 1.3277924376094619 0.8291845726965965 0.049610590628620464 0.20296016788878102 0.7825806420442046 0.015378163104752105 0.0748430099486198 1.6608961608525667e-05 4.779657518769816 0.3263469504936001 KSPSS(ph)DSWTCADTSTER ddPTM_KYSE-520_SHP099_60min_R1 1 KSPSSDSWTCADTSTER 17 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 KS(0.003)PS(0.151)S(0.837)DS(0.003)WT(0.006)CADTSTER 229.93 1.6187e-21 0.0 278100.0 224990.0 239690.0 226280.0 237980.0 218180.0 238470.0 243290.0 300720.0 221230.0 True False 262673.23862139403 214181.14268312516 255140.8009175595 247785.58316643757 256707.67207902303 216818.25769023845 262576.8748429193 242446.08377431263 246116.82853429386 219270.07431433554 1.197943857331109 0.9767914903703863 1.1635915284627547 1.1300474264044966 1.1707373789230293 0.9888182797777398 1.1975043820457738 1.1056961809879857 1.1224369276286743 1.0 17.742349402798936 -10.193793635920207 14.105338975003468 0.9999999999560623 1.1145261477284711 0.18365098421224135 0.0738686526816683 0.0 0.0 0.06688837843974621 0.01622281467255063 6.400388910641237e-11 10.193793635920207 0.11452614777240888 KSPVFS(ph)DEDS(ph)DLDFDISK ddPTM_KYSE-520_SHP099_60min_R1 3 KSPVFSDEDSDLDFDISK 18 1 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 2 KS(0.001)PVFS(0.999)DEDS(1)DLDFDISK;KSPVFS(1)DEDS(1)DLDFDISK;KS(0.005)PVFS(0.995)DEDS(1)DLDFDISK 212.76 2.4684000000000003e-18 1397200000.0 1861270.0 1542430.0 1473390.0 1568880.0 1651470.0 1648290.0 1570630.0 1690550.0 1991230.0 1586490.0 True False 1758021.642750241 1468329.347565368 1568367.0769073542 1717985.8834990277 1781431.293421061 1638002.4107078677 1729404.6082716226 1684685.8766273377 1629672.8268234315 1572434.9328705438 1.1180250489226293 0.9337933906650581 0.997413021118932 1.0925640531037903 1.1329125652080152 1.0416980546963732 1.0998258637732783 1.0713867018661785 1.0364008028290224 1.0 20.58456888915232 -5.257107833438872 24.788891833949208 1.073757804962118 1.0081487738663322 0.1448260903061086 0.054880315131028264 479.81363901038895 2745901.2600696557 0.014511802648096402 0.024104043524316856 5.532127318360579e-06 5.257107833438872 -0.06560903109578575 KSPVFS(ph)DEDS(ph)DLDFDISKLEQQSK ddPTM_KYSE-520_SHP099_60min_R1 4 KSPVFSDEDSDLDFDISKLEQQSK 24 2 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 2 KS(0.007)PVFS(0.993)DEDS(1)DLDFDISKLEQQSK;KS(0.024)PVFS(0.976)DEDS(1)DLDFDISKLEQQSK;KS(0.032)PVFS(0.968)DEDS(1)DLDFDISKLEQQSK;KS(0.004)PVFS(0.996)DEDS(1)DLDFDISKLEQQSK 161.68 1.9518999999999997e-10 519690000.0 844143.0 851085.0 818768.0 669487.0 728264.0 766838.0 592541.0 636640.0 1074960.0 677920.0 True False 797316.7050326497 810197.5990953712 871547.0953551194 733114.8431913941 785574.233544657 762051.8795978867 652440.8269228755 634431.6444328928 879774.3615363935 671914.1562137795 1.1866347771648549 1.2058052231862708 1.297110780142313 1.0910840862804247 1.1691586287917335 1.1341506538454722 0.9710181291600765 0.9442153265647806 1.3093552999298326 1.0 19.357917400423517 -5.9368068674616525 1.1933595450631567 1.0584388235296391 1.2189974785050413 0.26365771244174796 0.10467363563040809 0.6204352637116367 1.8632083294665243 0.04631209857619457 0.056530147709017355 1.1566264843849534e-06 5.9368068674616525 0.16055865497540212 KSQAAPGS(ph)SPCR ddPTM_KYSE-520_SHP099_60min_R1 3 KSQAAPGSSPCR 12 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KSQAAPGS(0.799)S(0.201)PCR;KSQAAPGS(0.5)S(0.5)PCR;KSQAAPGS(0.5)S(0.5)PCR 128.74 5.0344e-05 1258930000.0 1440070.0 1362990.0 1370150.0 1269270.0 1168580.0 1212310.0 1021470.0 1142720.0 1580880.0 1157570.0 True False 1360186.4463916249 1297509.9145103018 1458472.0613175123 1389901.03918006 1260540.5976893236 1204743.5236064387 1124730.1561865082 1138756.1710328532 1293832.0427417327 1147314.8303758325 1.185538973592855 1.1309100868898112 1.2712047493012464 1.2114382228675298 1.0986876176580067 1.0500548687336273 0.9803151902238324 0.992540269578686 1.1277044525938051 1.0 20.129829899560207 -5.994910994791443 2.567335664600517 1.026329511670146 1.1999571299495142 0.7154902018942161 0.050293061783335744 0.1580884880289303 2.101978942310013 0.018068266863125335 0.019749279136020544 1.0117867906888573e-06 5.994910994791443 0.17362761827936812 KSQAAPGSS(ph)PCR ddPTM_KYSE-520_SHP099_60min_R1 1 KSQAAPGSSPCR 12 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 KS(0.122)QAAPGS(0.039)S(0.839)PCR 57.803999999999995 0.054789 0.0 274070.0 276720.0 277610.0 222370.0 272610.0 249510.0 202220.0 226460.0 292130.0 226080.0 True False 258866.79075499997 263425.955834812 295505.1847917051 243503.97794202185 294062.85606127634 247952.7155389649 222662.37107701247 225674.4631161616 239086.5559980157 224077.10708757845 1.1552576437619944 1.175604055490838 1.3187656188198185 1.0866972583988717 1.31232886698392 1.1065508599325806 0.9936863875611665 1.0071285998348722 1.0669834107799818 1.0 17.773635737393565 -6.519832825014044 5.283889702083937 1.0202959735672434 1.2078592756925102 0.6459689955030474 0.06731081371137049 0.10743236112933212 9.581871912526163 0.02415292854150883 0.019644526625766684 3.021114428170777e-07 6.519832825014044 0.18756330212526673 KSQDNSVNFS(ph)NS(ph)WPLK ddPTM_KYSE-520_SHP099_60min_R1 1 KSQDNSVNFSNSWPLK 16 1 G3V3B1;G3XAE9;Q9Y4F4-2;Q9Y4F4-3;Q9Y4F4 G3V3B1 FAM179B Protein FAM179B 2 KS(0.053)QDNS(0.364)VNFS(0.589)NS(0.993)WPLK 44.238 0.0551 4565400000.0 1344900.0 1111300.0 973210.0 1225800.0 1192300.0 1155100.0 1106900.0 1289800.0 1208100.0 1009000.0 True False 1270295.716008319 1057911.4799046922 1035944.6737910567 1342299.6634497908 1286127.2267409835 1147890.5924374098 1218796.2543029631 1285325.984841582 988739.4937226654 1000061.0449901217 1.27021817555234 1.0578469036509084 1.0358814384188813 1.3422177277818572 1.2860487199095807 1.1478205237448762 1.2187218574392147 1.2852475269189971 0.9886791398143419 1.0 19.93165663594071 -7.775497737687595 24.88949155853647 0.9943393120218407 1.2006848562794106 0.4413970139876898 0.09489530756131255 254.61956212440393 450774.62256753776 0.09511926538452121 0.025063390236462778 1.6768810708790753e-08 7.775497737687595 0.2063455442575699 KSRVS(ph)VS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 6 KSRVSVSPGR 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KS(0.003)RVS(0.997)VS(1)PGR;KS(0.078)RVS(0.964)VS(0.958)PGR;KS(0.072)RVS(0.94)VS(0.988)PGR;KS(0.066)RVS(0.934)VS(1)PGR;KS(0.032)RVS(0.969)VS(0.999)PGR;KS(0.07)RVS(0.951)VS(0.979)PGR 101.3 0.0015164000000000002 20477850000.0 31997070.0 32294910.0 29917600.0 26060390.0 26161160.0 26539900.0 22932340.0 23641290.0 36211130.0 23599920.0 True False 30222128.742522284 30743414.04795183 31846136.365852512 28537161.63025807 28219894.45536117 26374254.639623992 25250564.725270573 23559283.88290859 29636101.600302693 23390843.06925992 1.2920495705535298 1.314335441305859 1.36147877490164 1.2200142400066547 1.206450505943822 1.1275461325412786 1.0795063970334051 1.0072011433341637 1.266995871527617 1.0 24.479440525470963 -5.890111772170557 1.273030786455558 1.0894335428262192 1.3216639561259245 0.6419978432654884 0.07277639017483242 0.27248251886970093 0.9270181446880557 0.02956546620628262 0.03727664264598279 1.2879180440936725e-06 5.890111772170557 0.23223041329970529 KSS(ph)DSKPGVSSK ddPTM_KYSE-520_SHP099_60min_R1 1 KSSDSKPGVSSK 12 2 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 KS(0.247)S(0.752)DSKPGVSSK 115.8 0.00011494 1082400000.0 1551800.0 1287100.0 947180.0 1017900.0 1127100.0 1461600.0 1242900.0 1122800.0 1274900.0 1648200.0 True False 1465718.5605633948 1225265.784023514 1008236.7383415848 1114640.9099572052 1215796.3576782364 1452477.612247009 1368544.4615350536 1118905.268863491 1043410.2976136309 1633598.2302801965 0.8972331956505567 0.750041081896468 0.6171877023695422 0.6823225498756942 0.7442444140440222 0.8891278071462397 0.8377484966424819 0.6849329584983543 0.6387190425853143 1.0 20.639621777744 -6.019322262268344 24.377606711114012 0.794868811666366 0.7271343224355848 0.07931759637384161 0.11524997733735252 1717.9864786381877 2167467.346052075 0.039171146073879115 0.03978211807141055 9.56484062011375e-07 6.019322262268344 -0.06773448923078118 KSS(ph)EASPTAQR ddPTM_KYSE-520_SHP099_60min_R1 1 KSSEASPTAQR 11 1 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 KS(0.171)S(0.745)EAS(0.054)PT(0.031)AQR 60.598 0.03243 336690000.0 743290.0 725560.0 768820.0 559010.0 618040.0 609090.0 530140.0 549740.0 822950.0 600520.0 True False 702058.2219881206 690703.0085122372 818379.3673554937 612138.142327515 666676.2318334293 605288.443379536 583731.7248678037 547833.0802502807 673523.0248812746 595199.8599974897 1.1795335805204685 1.1604555964027785 1.3749656583570857 1.0284581423290264 1.1200880185627748 1.016949908862695 0.9807322953171824 0.9204186981035096 1.1315913698032711 1.0 19.18301466153304 -5.295151225709308 23.261523944227132 1.0263709212091592 1.2305319698284571 0.5971923457023387 0.0789456523748311 182.1318104572701 125672.35249166863 0.02249693469952096 0.03337176202259248 5.068141997405717e-06 5.295151225709308 0.20416104861929796 KSS(ph)FNVSDVARPEAAGS(ph)PPEEGGCTEGTPAK ddPTM_KYSE-520_SHP099_60min_R1 1 KSSFNVSDVARPEAAGSPPEEGGCTEGTPAK 31 2 F5H1R4;K7ES92;K7ES98;K7EM85;Q92619;Q92619-2 F5H1R4;K7ES98 HMHA1 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 2 KS(0.448)S(0.521)FNVS(0.031)DVARPEAAGS(1)PPEEGGCTEGTPAK 149.68 5.7626e-07 1167600000.0 346350.0 330150.0 269580.0 402760.0 395270.0 306670.0 309180.0 363550.0 446890.0 328860.0 True False 327137.27506839257 314289.09843474714 286957.5581432508 441038.1893057908 426375.5002213439 304755.9587765398 340434.931706017 362288.9299032076 365746.0411801363 325946.5562492087 1.0036531105985163 0.964235063721463 0.8803822364174694 1.3530997056112064 1.308114756995163 0.9349875092514638 1.0444501565641053 1.1114979525238875 1.1221043271293167 1.0 18.314275907129428 -5.2111582845595565 24.999644494340203 1.1259094573875095 0.9509045991159878 0.2985137429185374 0.12325177141076868 504.7279889751422 250948.80724862672 0.035912288124974594 0.06220183245755643 6.149527039439774e-06 5.2111582845595565 -0.17500485827152168 KSS(ph)GTGTEPVAK ddPTM_KYSE-520_SHP099_60min_R1 5 KSSGTGTEPVAK 12 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9;A0A0U1RR74 Q6ULP2-7 AFTPH Aftiphilin 1 KS(0.018)S(0.982)GTGTEPVAK;KS(0.185)S(0.811)GT(0.002)GT(0.002)EPVAK;KS(0.338)S(0.626)GT(0.035)GTEPVAK;KS(0.228)S(0.772)GTGTEPVAK;KS(0.001)S(0.925)GT(0.073)GT(0.001)EPVAK 196.67 5.1926e-08 5563980000.0 9005820.0 8147110.0 8033250.0 7587300.0 8284080.0 7980700.0 7848290.0 8456240.0 10216660.0 8150870.0 True False 8506249.211942926 7755710.606538574 8551086.148654448 8308394.710795081 8935989.966032408 7930889.491009655 8641671.745129097 8426907.277141258 8361572.085039837 8078659.633080913 1.05292828244813 0.9600244296442556 1.0584783289593014 1.028437276497383 1.1061228436262935 0.9817085817718869 1.06969127771428 1.0431071068564794 1.0350197266388648 1.0 22.945684518103707 -4.80468099544161 24.999998695610167 1.0427415216084988 1.0064755467824213 0.10561387454604054 0.03888821831277577 234.36794637549008 135498.14284802836 0.009439626373934591 0.019650416751597722 1.5679023265933532e-05 4.80468099544161 -0.03626597482607741 KSS(ph)IS(ph)SISGRDDLMDYHR ddPTM_KYSE-520_SHP099_60min_R1 1 KSSISSISGRDDLMDYHR 18 2 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 2 KS(0.452)S(0.548)IS(0.814)S(0.185)IS(0.001)GRDDLMDYHR 97.352 0.00052317 574420000.0 131400.0 144740.0 200050.0 187640.0 222350.0 317810.0 382300.0 492980.0 522040.0 567650.0 True False 124110.98006059414 137786.4731408309 212945.54309131697 205473.24918397705 239847.68000155798 315826.42990436644 420946.6148884476 491269.9674423974 427250.69555747055 562621.0626250172 0.22059426549288857 0.24490102183157078 0.3784883951869459 0.36520717554600945 0.42630412534237927 0.5613483939453265 0.7481885106192788 0.8731809028803196 0.7593933536082882 1.0 19.10180403771129 -6.5441437276324494 0.5507075838073324 0.9755527169440774 0.2127382603559632 0.956906138041639 0.053735722282985655 0.16842398204770856 0.1083134248372148 0.04993875101071055 0.047370432141582056 2.8566449942466393e-07 6.5441437276324494 -0.7628144565881142 down KSS(ph)ISSISGR ddPTM_KYSE-520_SHP099_60min_R1 3 KSSISSISGR 10 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KS(0.191)S(0.798)IS(0.011)SISGR;KS(0.091)S(0.868)IS(0.013)S(0.013)IS(0.016)GR;KS(0.004)S(0.996)ISSISGR 152.0 9.1419e-05 3990240000.0 14685440.0 13380640.0 11988120.0 12740080.0 12688880.0 13980460.0 12895060.0 13627850.0 16584910.0 13659490.0 True False 13870809.368501151 12737813.969649877 12760893.396870192 13950893.372755278 13687422.666148733 13893202.76335166 14198618.508457799 13580578.169114092 13573508.415558305 13538477.545522425 1.024547207901426 0.9408601467055392 0.9425648751096535 1.0304624966763158 1.0110016152204329 1.0262012635199556 1.0487603543836952 1.0031097014749337 1.0025875043865227 1.0 23.690562175575028 -5.2698593244627725 24.89057628405095 1.0189767403736805 0.9664776830892471 0.42161532638363997 0.02572046000588934 499.7214885157511 1477249.330209181 0.0072392439521255575 0.010936718968523631 5.372057784871443e-06 5.2698593244627725 -0.05249905728443338 KSS(ph)LVTSK ddPTM_KYSE-520_SHP099_60min_R1 6 KSSLVTSK 8 1 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 A6NMQ3 ENSA Alpha-endosulfine 1 KS(0.013)S(0.978)LVT(0.009)SK;KS(0.104)S(0.889)LVT(0.006)S(0.001)K;KS(0.008)S(0.87)LVT(0.119)S(0.003)K;KS(0.002)S(0.998)LVTSK;KS(0.024)S(0.971)LVT(0.004)SK;KS(0.024)S(0.973)LVT(0.002)SK 165.78 0.00017836 41758100000.0 78167000.0 60193200.0 53165700.0 41724400.0 40504350.0 47967200.0 49474500.0 42391700.0 49002300.0 53858600.0 True False 73830920.68794878 57301428.320164725 56592846.09012774 45689874.43110168 43691811.906773575 47667818.91227062 54475865.284589246 42244653.08699712 40104717.567458145 53381454.70535676 1.3830818417269535 1.073433248240322 1.0601593081810248 0.8559128761718957 0.8184829759311365 0.8929659031470196 1.0205017001742116 0.7913732085453625 0.7512855876412391 1.0 25.6698352853079 -3.887062935635798 0.8589211429504656 0.8685438508469988 2.006207181462284 0.7584071455471251 0.08713744871857697 1.971076416638214 0.7314978848418103 0.03161865166588834 2.455637613168198 0.00012969913043149765 3.887062935635798 1.1376633306152852 KSS(ph)PEMEDAR ddPTM_KYSE-520_SHP099_60min_R1 3 KSSPEMEDAR 10 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 KS(0.004)S(0.996)PEMEDAR;KS(0.01)S(0.99)PEMEDAR;KS(0.149)S(0.851)PEMEDAR 186.51 4.1564e-06 3658100000.0 7092800.0 6192700.0 5424000.0 5545500.0 6202000.0 5561400.0 5765700.0 6185900.0 7774100.0 5934700.0 True False 6699348.24485375 5895193.396567798 5773639.718706845 6072542.652684623 6690062.115447099 5526689.239703415 6348553.223809373 6164442.556699915 6362519.409112976 5882123.17512674 1.1389336886352097 1.0022220244377622 0.9815570920244191 1.0323725756650413 1.1373549849715534 0.9395738707196205 1.0792962056039541 1.0479961696087896 1.0816705498479953 1.0 22.487905564750083 KSS(ph)PFKDLMTVPESR ddPTM_KYSE-520_SHP099_60min_R1 1 KSSPFKDLMTVPESR 15 2 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 KS(0.223)S(0.777)PFKDLMTVPESR 153.06 2.7106999999999997e-06 961560000.0 752010.0 833350.0 823540.0 723560.0 744150.0 708720.0 637260.0 598590.0 1060500.0 755310.0 True False 710294.5062052314 793314.6151161484 876626.706110589 792326.9248537527 802710.3713656827 704296.6155936642 701680.4598582583 596513.6310019565 867939.9330294568 748618.5410222881 0.948806992190278 1.059704738320834 1.1709925123060634 1.0583853877994764 1.0722555311942028 0.9407950471436368 0.937300402552236 0.7968192053958184 1.1593887747479876 1.0 19.51387125431997 -6.2592578627528175 24.223155768418746 0.9523143645124822 1.0677510131877472 0.18451827063882664 0.09729842060026841 184.4635331458716 2048253.4043451021 0.03234760814755632 0.030864147185323747 5.50480750894745e-07 6.2592578627528175 0.11543664867526504 KSS(ph)PQKEVK ddPTM_KYSE-520_SHP099_60min_R1 3 KSSPQKEVK 9 2 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 1 KS(0.335)S(0.665)PQKEVK;KS(0.11)S(0.89)PQKEVK;KS(0.099)S(0.901)PQKEVK 101.39 0.0017303000000000002 7905400000.0 8460350.0 10442610.0 6538500.0 4838190.0 9862080.0 11276830.0 5093540.0 4502480.0 10271060.0 16502550.0 True False 7991037.520210407 9940931.340922827 6959982.171969886 5298010.122945131 10638169.588440597 11206447.121042306 5608444.731359927 4486861.947766736 8406094.416352235 16356350.245789627 0.48855871879286894 0.6077719779497736 0.42552171281374285 0.3239115110236111 0.6503999626187403 0.6851435040605721 0.34289096571551014 0.27431926318169436 0.5139346058278552 1.0 23.963347525588652 -8.047631556477533 23.160528430786684 1.000000001689719 0.47560770950929426 0.5827987560976573 0.13256840492740093 4314.263719272836 2097778.487471545 0.13782398693455486 0.03558600039011565 8.96124690754331e-09 8.047631556477533 -0.5243922921804247 KSS(ph)PSTGSLDSGNESK ddPTM_KYSE-520_SHP099_60min_R1 6 KSSPSTGSLDSGNESK 16 1 A0A0U1RQT1;A0A087X1H5;Q15057 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 KS(0.165)S(0.833)PS(0.001)TGSLDSGNESK;KS(0.193)S(0.75)PS(0.05)T(0.007)GSLDSGNESK;KS(0.17)S(0.595)PS(0.234)T(0.001)GSLDSGNESK;KS(0.442)S(0.555)PS(0.001)T(0.001)GSLDSGNESK;KSS(0.581)PS(0.145)T(0.145)GS(0.13)LDSGNESK;KSS(0.999)PSTGSLDSGNESK 274.17 1.0635999999999999e-29 3960410000.0 3862980.0 3627650.0 3152800.0 3138680.0 3120910.0 3217100.0 3195950.0 3331290.0 4343500.0 3183760.0 True False 3648692.7987402836 3453372.2487863386 3356034.532658356 3436979.2035214477 3366507.861451148 3197020.88557735 3519027.815466211 3319734.5325189335 3554829.890724614 3155554.3633278 1.1562763237875031 1.0943789430217468 1.063532472031042 1.089183961925746 1.0668514859306306 1.0131408042692758 1.1151852924362544 1.0520289465138517 1.1265310247977296 1.0 21.58946204742198 -1.6319028070048216 0.009082885909607355 4.6445093791621634e-07 2.267244090336464 0.3034393561221662 0.03874973447402093 19505.855905396736 15.214156506100585 1680.938532194408 2142.1841659338315 0.023339803372981575 1.6319028070048216 2.267243625885526 KSS(ph)PSVKPAVDPAAAK ddPTM_KYSE-520_SHP099_60min_R1 2 KSSPSVKPAVDPAAAK 16 2 Q6FI81-3;Q6FI81;H3BPG7;H3BV90;H3BT65 Q6FI81-3 CIAPIN1 Anamorsin 1 KS(0.214)S(0.68)PS(0.106)VKPAVDPAAAK;KS(0.042)S(0.949)PS(0.009)VKPAVDPAAAK 276.62 9.1721e-29 5176600000.0 8480900.0 7426700.0 7331900.0 6246250.0 6794500.0 7840600.0 6950700.0 7176400.0 9302300.0 7807640.0 True False 8010447.570744993 7069910.184296028 7804526.005454773 6839891.721996462 7329188.49458325 7791663.907077107 7653344.588294884 7151506.743384346 7613236.811899985 7738470.383851999 1.0351461171784715 0.9136056395652727 1.0085360049630239 0.8838816177767357 0.9471107507082013 1.006873906674904 0.988999661259317 0.9241499144724414 0.9838167537329675 1.0 22.883616995162058 KSS(ph)T(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 1 KSSTKR 6 2 A0A0U1RR16;Q8NEY4-2;Q8NEY4 A0A0U1RR16 ATP6V1C2 V-type proton ATPase subunit C 2 2 KS(0.141)S(0.859)T(1)KR 90.601 0.041888 1094800000.0 280110.0 278890.0 264400.0 218810.0 266970.0 254360.0 248120.0 287560.0 326570.0 255240.0 True False 264571.7399145587 265491.7057775753 281443.64705495746 239605.63661237436 287979.02014848613 252772.44488994844 273202.39101784315 286562.52147700865 267273.1201597641 252978.77217371503 1.045825851873781 1.0494623857027336 1.1125188277129285 0.9471373212604668 1.1383525094775035 0.9991844087075222 1.0799419598346418 1.1327532306949153 1.0565041401032393 1.0 17.948656805741454 KSS(ph)TPEEVK ddPTM_KYSE-520_SHP099_60min_R1 7 KSSTPEEVK 9 1 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 1 KS(0.179)S(0.655)T(0.166)PEEVK;KS(0.135)S(0.843)T(0.022)PEEVK;KS(0.072)S(0.464)T(0.464)PEEVK;KS(0.013)S(0.693)T(0.294)PEEVK;KS(0.011)S(0.495)T(0.495)PEEVK;KS(0.037)S(0.482)T(0.482)PEEVK;KS(0.157)S(0.422)T(0.422)PEEVK 173.76 6.6829e-05 27247030000.0 46492500.0 38746540.0 34653420.0 34300910.0 34892170.0 39879700.0 35939320.0 37928900.0 44549300.0 39396000.0 True False 43913468.34449905 36885098.05865777 36887234.90063239 37560858.17345538 37637985.26970976 39630795.9996764 39572417.199562274 37797333.49857181 36460270.11646324 39046982.08962422 1.1246315590717055 0.9446337741030973 0.9446884989975773 0.9619401081303095 0.9639153464746545 1.0149515757379701 1.0134564845173444 0.9679962823199986 0.9337538566431658 1.0 25.218707712128488 -4.255146335686967 24.981685264376473 0.9719673766541647 1.1246316275781039 0.737603116602026 0.027363304121717877 401.0124702774775 1591869.613509609 0.007415740024496628 0.0677026194935356 5.5571697667836724e-05 4.255146335686967 0.1526642509239392 KSS(ph)TPEEVKK ddPTM_KYSE-520_SHP099_60min_R1 1 KSSTPEEVKK 10 2 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 1 KSS(0.5)T(0.5)PEEVKK 143.76 0.00013240000000000002 2267200000.0 3580000.0 3170500.0 3012600.0 3181100.0 3141100.0 2859900.0 3234300.0 2973100.0 3710600.0 2976600.0 True False 3381410.26344693 3018184.420982479 3206797.0163304256 3483430.7875674106 3388286.6995857586 2842050.303273959 3561254.607726145 2962787.0100267567 3036848.5766139613 2950229.639759759 1.1461515462648129 1.023033726021495 1.0869652223382718 1.1807320828934085 1.1484823601262684 0.9633318928710211 1.2071109854404902 1.004256404348246 1.0293600659714257 1.0 21.492395824560823 KSS(ph)TPLSEAK ddPTM_KYSE-520_SHP099_60min_R1 4 KSSTPLSEAK 10 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KSS(0.91)T(0.085)PLS(0.005)EAK;KSS(0.499)T(0.499)PLS(0.003)EAK;KS(0.001)S(0.487)T(0.487)PLS(0.026)EAK;KS(0.006)S(0.497)T(0.497)PLSEAK 148.52 0.00011133 3281670000.0 5192600.0 5442520.0 4440750.0 3727910.0 3683560.0 4522230.0 3973920.0 4725110.0 5558540.0 4795550.0 True False 4904556.1268085325 5181053.169810931 4727007.850451216 4082209.4455629913 3973435.2154105664 4494005.085133956 4375642.615321734 4708719.696258961 4549249.255390446 4753065.157881448 1.031872268503596 1.0900446338758476 0.9945177887185022 0.8588582966917557 0.8359732264183012 0.9454962084165996 0.9205938631129685 0.9906701338716231 0.9571190598653927 1.0 22.180426748432993 -5.001390643449729 5.667460484110832 0.925578495685196 1.0580518932039842 0.5215130721310552 0.05042020794945375 0.12345175224091579 14.598864979875195 0.014494062098388525 0.028614854934880127 9.968030462971575e-06 5.001390643449729 0.13247339751878817 KSS(ph)TTLR ddPTM_KYSE-520_SHP099_60min_R1 5 KSSTTLR 7 1 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 KS(0.025)S(0.962)T(0.007)T(0.007)LR;KS(0.088)S(0.509)T(0.201)T(0.201)LR;KS(0.02)S(0.964)T(0.008)T(0.008)LR;KS(0.027)S(0.827)T(0.073)T(0.073)LR;KS(0.048)S(0.934)T(0.009)T(0.009)LR 99.815 0.0034215000000000005 1648570000.0 2524230.0 2034580.0 1523090.0 1623270.0 2572770.0 2940390.0 2817940.0 1250314.0 2049330.0 4331310.0 True False 2384205.929972246 1936835.7228331603 1621270.8184301646 1777545.0927460787 2775232.3619411215 2922037.9353277134 3102804.8756441274 1245976.9525594818 1677223.3314052434 4292937.963108184 0.5553786126100986 0.451167880709566 0.3776599690847449 0.41406260887569313 0.6464645857429979 0.680661579654436 0.7227695583557017 0.2902387510061679 0.39069358696040785 1.0 22.03353389399371 -5.756368270537379 24.96271201882942 0.5943077068729766 0.44454534449193994 0.16255092449168507 0.18517921144442923 275.9638122581814 1358432.4500079574 0.056700817176541754 0.07093898399777379 1.7523938867341423e-06 5.756368270537379 -0.14976236238103668 KSS(ph)TVS(ph)EDVEATVPMLQR ddPTM_KYSE-520_SHP099_60min_R1 2 KSSTVSEDVEATVPMLQR 18 1 Q8IWT6 Q8IWT6 LRRC8A Volume-regulated anion channel subunit LRRC8A 2 KS(0.371)S(0.425)T(0.274)VS(0.93)EDVEATVPMLQR;KS(0.45)S(0.502)T(0.301)VS(0.747)EDVEATVPMLQR 73.036 0.0089898 327970000.0 185985.0 218851.0 181002.0 263530.0 243110.0 222720.0 217220.0 287100.0 350110.0 192953.0 True False 175668.0412980942 208337.06945795185 192669.67853343958 288575.8119668166 262241.3738933162 221329.92186621105 239178.7174629046 286104.1171096434 286538.8495548733 191243.58653516258 0.9185565094272868 1.089380685817908 1.007456940251509 1.5089437360753442 1.3712427101188032 1.1573194472878008 1.2506496128638989 1.4960194079869942 1.4982925950418184 1.0 17.545051841436553 -5.2416664809909275 24.484470312977248 1.338443066973369 1.0135562325855703 0.46198705755003 0.15823942337450658 565.0213640949379 699655.5531036302 0.043121768692481556 0.07454733187615814 5.732360820247425e-06 5.2416664809909275 -0.32488683438779864 KSS(ph)VNGSSATSSG ddPTM_KYSE-520_SHP099_60min_R1 2 KSSVNGSSATSSG 13 1 P35226;R4GMX3 P35226 BMI1;COMMD3-BMI1 Polycomb complex protein BMI-1 1 KS(0.232)S(0.764)VNGS(0.004)SATSSG;KS(0.435)S(0.542)VNGS(0.023)SATSSG 116.79 0.00012891 1100130000.0 1537870.0 1602800.0 1370700.0 1347480.0 1307600.0 2292120.0 2205400.0 2523300.0 2835400.0 2669200.0 True False 1452561.2854321594 1525799.0821481512 1459057.5151975413 1475544.0940653654 1410500.680773723 2277814.0288612563 2428343.3546298267 2514547.2612426495 2320562.834617374 2645552.964606177 0.5490577224744358 0.576741083078367 0.5515132506200797 0.557745058899253 0.5331591163149112 0.860997326205615 0.9178963290917577 0.9504807860147947 0.8771560674321326 1.0 21.335137870460006 -6.336151000723441 3.7727234040940005 0.9275749521790047 0.5537500789953345 0.9699750206226403 0.03249015536247693 0.03681993572120994 1.015606591020229 0.011639667586858013 0.010299701529899521 4.611572060044544e-07 6.336151000723441 -0.3738248731836702 KSSEAS(ph)PTAQR ddPTM_KYSE-520_SHP099_60min_R1 4 KSSEASPTAQR 11 1 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 KS(0.012)S(0.212)EAS(0.668)PT(0.109)AQR;KSSEAS(0.974)PT(0.026)AQR;KSS(0.001)EAS(0.989)PT(0.01)AQR;KSSEAS(0.999)PT(0.001)AQR 209.22 9.5514e-10 3307680000.0 3623860.0 3370760.0 3495590.0 2799110.0 3028450.0 2976920.0 2750100.0 2809530.0 4231190.0 2903880.0 True False 3422837.2618141873 3208823.629986093 3720921.3245417476 3065136.5728168897 3266771.7854765872 2958339.9380475935 3028106.946389537 2799784.396179235 3462912.5556199057 2878153.8823844567 1.1892474835217908 1.1148895302733735 1.2928152825029235 1.0649661894650067 1.1350233236209641 1.0278602392158078 1.0521004331710189 0.9727709186486252 1.2031714415321655 1.0 21.456712298100786 -5.304867101316101 22.787422126000664 1.064809576747615 1.1905746118028568 0.40725279689541927 0.07379384944872547 161.93591224114581 84970.60060356947 0.019987734653098856 0.02964712919109362 4.956018269794359e-06 5.304867101316101 0.12576503505524195 KSSEGGVGVGPGGGDEPPT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 KSSEGGVGVGPGGGDEPPTSPR 22 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 KSSEGGVGVGPGGGDEPPT(0.5)S(0.5)PR 93.667 0.0040744 1041700000.0 463800.0 439060.0 501670.0 484330.0 517000.0 501880.0 466890.0 485930.0 658800.0 482310.0 True False 438072.0894376219 417966.8985575038 534008.4509003805 530360.5775808754 557684.9586723881 498747.58075706614 514087.7976072904 484244.42224691407 539178.526996517 478037.1086315025 0.9163976635448027 0.8743398598364795 1.1170857685695355 1.1094548268421285 1.1666143665476034 1.0433239841669455 1.0754139967898972 1.0129850036813701 1.1279009877288537 1.0 18.866763089213233 -4.759314601095017 24.999979979515814 1.0845046145277346 0.8953686997993549 0.6871892668225694 0.05022780164156078 28.538775733601835 335762.48038264335 0.012959492557853697 0.031009359151606474 1.7405455727183093e-05 4.759314601095017 -0.18913591472837976 KSSEGGVGVGPGGGDEPPTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 KSSEGGVGVGPGGGDEPPTSPR 22 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 KSSEGGVGVGPGGGDEPPT(0.098)S(0.902)PR 139.85 7.529300000000001e-07 917090000.0 346330.0 348920.0 306830.0 294860.0 342670.0 347540.0 326370.0 332000.0 440720.0 328290.0 True False 327118.3845082611 332157.3594604024 326608.7527453581 322883.4057471082 369636.1794744046 345370.8739465825 359362.6646642497 330848.36948938266 360696.35764709377 325381.606005755 1.0053376665135625 1.020824021178774 1.003771407839143 0.9923222449808592 1.1360082212756268 1.0614333065295458 1.1044344794889656 1.016801083351746 1.1085333374398372 1.0 18.311773171438837 -5.729277792514775 24.999952385835723 1.0732150624277144 1.0065257819841364 0.40322124281015403 0.03906660768755104 187.68081246945619 145887.91253606504 0.010831935149798886 0.01398281054427603 1.865186259767365e-06 5.729277792514775 -0.06668928044357791 KSSGTGT(ph)EPVAK ddPTM_KYSE-520_SHP099_60min_R1 1 KSSGTGTEPVAK 12 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9;A0A0U1RR74 Q6ULP2-7 AFTPH Aftiphilin 1 KSS(0.029)GT(0.116)GT(0.856)EPVAK 223.58 6.1455e-11 1753700000.0 2947900.0 2560300.0 2528700.0 2429000.0 2566000.0 2537100.0 2237200.0 2293300.0 3160900.0 2476600.0 True False 2784374.110507045 2437299.3449113527 2691704.0480630537 2659851.4296945226 2767929.601457152 2521265.0178105393 2463358.008967913 2285345.0775602455 2586960.23980463 2454659.250765643 1.1343220488296122 0.9929277736415449 1.0965693292148282 1.083592938150123 1.127622744620784 1.0271344248795922 1.0035437742324345 0.9310233495127334 1.053897904158274 1.0 21.22709133669505 -6.511556295561264 3.9742270016856835 0.9927576786675409 1.0822463185059321 0.46404197053591645 0.04560047751906626 0.19844727988801655 7.131430083820452 0.017142073498444516 0.013930284166704452 3.079241168009177e-07 6.511556295561264 0.08948863983839117 KSSIS(ph)SISGR ddPTM_KYSE-520_SHP099_60min_R1 2 KSSISSISGR 10 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KS(0.028)S(0.202)IS(0.383)S(0.383)IS(0.004)GR;KS(0.061)S(0.286)IS(0.323)S(0.323)IS(0.007)GR 91.20200000000001 0.0036882 13154300000.0 12466200.0 10563000.0 9197100.0 9568300.0 10339900.0 11283500.0 11461300.0 11084400.0 13035700.0 11068200.0 True False 11774675.035246417 10055537.62461376 9789959.781880306 10477668.355185706 11153591.30401668 11213075.49109819 12619920.05550866 11045950.8035184 10668745.48325516 10970144.358929312 1.0733382032171934 0.916627648243198 0.8924185007567036 0.9551076095600558 1.0167223820476026 1.0221447525411222 1.1503877836608858 1.006910250413194 0.9725255324075271 1.0 23.38707917486979 -5.843167950120379 3.362348878825222 1.0368051078806129 0.9509116627188128 0.2197807648309833 0.06252357668469816 0.3344335757029159 7.5235590083570445 0.02091221190028371 0.02469471601143521 1.4349344090050363e-06 5.843167950120379 -0.08589344516180009 KSSPS(ph)SPAVR ddPTM_KYSE-520_SHP099_60min_R1 1 KSSPSSPAVR 10 1 B3KNS5;Q8WVR3-2;Q8WVR3-3;Q8WVR3 B3KNS5 C7orf43 Uncharacterized protein C7orf43 1 KS(0.157)S(0.162)PS(0.666)S(0.015)PAVR 149.69 0.0001696 588400000.0 1067700.0 893410.0 775880.0 835470.0 872970.0 908090.0 829090.0 862620.0 1043100.0 823060.0 True False 1008472.552592817 850489.2425642506 825894.4662518919 914872.817606786 941667.7724801449 902422.2734711183 912902.5083386425 859627.7725570215 853699.3344111529 815768.3287309897 1.2362242037044981 1.0425622233793665 1.0124130064434524 1.121486070720548 1.1543323506380843 1.106223717798566 1.1190707903048343 1.0537645827636624 1.0464972766706555 1.0 19.637799971675488 -7.694328774423256 1.5051900377919858 1.005490819448518 1.1084049725611633 0.29798267273910917 0.05755705369053811 0.5342789616835457 2.3132217122303236 0.05513138034655961 0.01712944695988252 2.0214882698184577e-08 7.694328774423256 0.1029141531126454 KSSS(ph)DS(ph)DDEEKKHEK ddPTM_KYSE-520_SHP099_60min_R1 1 KSSSDSDDEEKKHEK 15 3 O95391 O95391 SLU7 Pre-mRNA-splicing factor SLU7 2 KS(0.073)S(0.087)S(0.839)DS(1)DDEEKKHEK 115.98 0.00017328 824620000.0 530170.0 470900.0 450250.0 566020.0 414800.0 518510.0 480390.0 391100.0 559490.0 401560.0 True False 500760.41323230753 448277.2571646894 479273.8354254711 619814.370619881 447442.4001108448 515273.7867584819 528952.5093545944 389743.3653834261 457900.7195951455 398002.49080895266 1.2581841189347738 1.1263177178955632 1.2041980803972654 1.5573127930935524 1.1242201002345589 1.2946496533505898 1.329018088001112 0.9792485584481151 1.150497120418638 1.0 18.602417934015985 -7.2599906258211755 24.996614263252102 1.04865462463481 1.2687846176682311 0.41855308419842197 0.1227116427693572 133.252196455533 2299167.807195225 0.06180669396968258 0.03319423195200229 5.495527357399074e-08 7.2599906258211755 0.22012999303342107 KSSS(ph)LESLQTAVAEVR ddPTM_KYSE-520_SHP099_60min_R1 1 KSSSLESLQTAVAEVR 16 1 R4GN62;A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8 R4GN62 PARD3B Partitioning defective 3 homolog B 1 KS(0.06)S(0.06)S(0.88)LESLQTAVAEVR 171.42 1.2285e-06 0.0 161980.0 160130.0 159750.0 117370.0 112190.0 143990.0 105420.0 145670.0 189630.0 125150.0 True False 152994.64650087524 152437.11443996977 170047.74060903743 128524.8095114228 121018.71472621907 143091.30499962135 116076.88240005267 145164.70476963368 155197.9721832872 124041.2683652267 1.2334173014935506 1.228922571084443 1.370896499609706 1.0361455603065488 0.975632677101398 1.1535782154234653 0.9357924498020794 1.1702936182675205 1.2511801453555182 1.0 16.92046065763532 -5.2722005386047455 24.86027017284443 1.0751318680065007 1.2728631706395743 0.474654775443931 0.09786734821531573 583.3198586589942 1347575.8033987097 0.02817269715805475 0.04228242806557176 5.343175774352231e-06 5.2722005386047455 0.1977313026330736 KSSSISEEKGDS(ph)DDEKPR ddPTM_KYSE-520_SHP099_60min_R1 11 KSSSISEEKGDSDDEKPR 18 3 S4R3H4;Q9UKV3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR;KSSSISEEKGDS(1)DDEKPR 212.82 4.6405e-18 60461540000.0 16765490.0 14355630.0 13347500.0 13491120.0 13700480.0 13599610.0 13015640.0 13616860.0 17240080.0 11400560.0 True False 15835474.848524261 13665963.98656008 14207901.206755087 14773311.988546861 14778629.83093208 13514729.789470801 14331387.911605189 13569626.29085903 14109716.059049957 11299559.907901475 1.4014240357671757 1.2094244464338688 1.2573853603643348 1.3074236615371442 1.3078942853869722 1.1960403679102862 1.268313812963958 1.2008986545900924 1.248696070825149 1.0 23.429763248263306 -13.832190621590113 0.1766398850767474 7.189465856102412e-13 1.3212862785226376 0.7210027248576512 0.05239285254837791 65.4576238751461 0.6605587402016141 22.953741639511907 0.16775731120124548 1.4716664132506746e-14 13.832190621590113 1.3212862785219186 KSSSS(ph)S(ph)GDPSSDPLGS(ph)PTLLAL ddPTM_KYSE-520_SHP099_60min_R1 1 KSSSSSGDPSSDPLGSPTLLAL 22 1 P15407;E9PPX2;P15407-2 P15407 FOSL1 Fos-related antigen 1 3 KS(0.351)S(0.383)S(0.407)S(0.421)S(0.421)GDPS(0.012)S(0.009)DPLGS(0.951)PT(0.044)LLAL 69.952 0.028683999999999998 28167000.0 27569.0 33676.0 31242.0 34219.0 37168.0 47571.0 48430.0 55669.0 64826.0 67729.0 True False 26039.69261256101 32058.154411293453 33255.909308967406 37471.163471682514 40092.910143008376 47274.09174343351 53325.77703125163 55475.8972322423 53055.23253047392 67128.97375236469 0.387905417839696 0.4775606212833571 0.49540321339704574 0.5581965785729378 0.597251945052952 0.7042278333916617 0.794377957094468 0.8264076468216245 0.7903477375684593 1.0 16.034647966642208 -5.985272038520876 0.28417839469028827 1.0175713324635935 0.23379169712286668 0.9750848139000041 0.028626575112567873 0.46294596781086744 0.06904966872029421 0.04442991563484892 0.12367597856105245 1.034493965105188e-06 5.985272038520876 -0.7837796353407269 down KSSSSS(ph)GDPSSDPLGS(ph)PTLLAL ddPTM_KYSE-520_SHP099_60min_R1 1 KSSSSSGDPSSDPLGSPTLLAL 22 1 P15407;E9PPX2;P15407-2 P15407 FOSL1 Fos-related antigen 1 2 KS(0.13)S(0.157)S(0.191)S(0.232)S(0.283)GDPS(0.008)S(0.009)DPLGS(0.982)PT(0.007)LLAL 132.28 1.1294e-05 198840000.0 105270.0 113070.0 115640.0 138940.0 141030.0 205950.0 259600.0 304040.0 391970.0 318520.0 True False 99430.46324945768 107637.94747846996 123094.33943054194 152144.81582616575 152128.25864906568 204664.58965672643 285842.90145184635 302985.3562034692 320798.1287596008 315698.1606048102 0.31495420517804146 0.3409520894016571 0.3899114875890296 0.48193127110620093 0.4818788248801337 0.6482919927839706 0.9054310006248767 0.9597311419965641 1.0161545703814685 1.0 18.268186329341592 -6.526667071970595 0.9725829545475605 1.0289398976801083 0.3531795895330695 0.9832881377359688 0.03539192858621177 0.06626150212634505 0.12904920581102966 0.025128649046424756 0.01774346413406212 2.973944969808736e-07 6.526667071970595 -0.6757603081470388 down KSSSSSGDPSSDPLGS(ph)PTLLAL ddPTM_KYSE-520_SHP099_60min_R1 7 KSSSSSGDPSSDPLGSPTLLAL 22 1 P15407;E9PPX2;P15407-2 P15407 FOSL1 Fos-related antigen 1 1 KSSSSSGDPSS(0.002)DPLGS(0.991)PT(0.007)LLAL;KSSSSSGDPSSDPLGS(0.965)PT(0.035)LLAL;KSSSSSGDPSS(0.001)DPLGS(0.988)PT(0.011)LLAL;KSSSSSGDPSSDPLGS(0.947)PT(0.053)LLAL;KSSSSSGDPSSDPLGS(0.995)PT(0.005)LLAL;KSSSSSGDPSS(0.001)DPLGS(0.991)PT(0.009)LLAL;KSSSSSGDPSSDPLGS(0.873)PT(0.127)LLAL 186.82 9.6798e-14 1010741000.0 1011028.0 1402309.0 1004874.0 1005804.0 938046.0 1633650.0 1317908.0 1595139.0 1816503.0 1920054.0 True False 954944.2614056488 1334939.9707312777 1069649.7858952465 1101395.309754001 1011864.8834483533 1623453.7843783 1451135.0021825903 1589605.8351172411 1486671.8455141983 1903043.8153394102 0.5017983578246376 0.701476214037242 0.5620731258383944 0.578754572478178 0.5317086634013657 0.8530827148027357 0.7625336791963345 0.835296498327724 0.7812073655535086 1.0 20.85987734767031 -6.265323662359313 24.999061528565896 0.8308869441422693 0.5816520362825269 0.7530151832576449 0.07737704718670121 175.41556925498918 1128962.008547008 0.02540566380574073 0.023247576568079072 5.428456195097589e-07 6.265323662359313 -0.24923490785974234 KSST(ph)PEEVK ddPTM_KYSE-520_SHP099_60min_R1 4 KSSTPEEVK 9 1 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 1 KS(0.037)S(0.037)T(0.926)PEEVK;KS(0.006)S(0.061)T(0.933)PEEVK;KS(0.025)S(0.314)T(0.66)PEEVK;KS(0.004)S(0.37)T(0.626)PEEVK 207.12 2.1249000000000002e-07 5108800000.0 12455100.0 10578100.0 9085500.0 8700600.0 9064800.0 10808200.0 9803900.0 9917400.0 11912600.0 10312400.0 True False 11764190.774373718 10069912.197948197 9671165.867313989 9527502.408069229 9778148.188343262 10740742.014701767 10794973.888843456 9882998.854138572 9749572.132208122 10221040.158925787 1.1509778448625245 0.9852140331485134 0.9462017286830043 0.9321460692774103 0.9566686008766184 1.0508462786267538 1.0561521842193788 0.9669269174632866 0.9538727938265713 1.0 23.28503868590433 -4.261865539891921 7.50028600534961 0.9827887559686695 1.1528017056641062 0.6134376718084922 0.03997986287915149 0.07464397164695838 41.12066842957453 0.011240544461858924 0.0648351286796516 5.471853484509374e-05 4.261865539891921 0.17001294969543668 KSST(ph)PEEVKK ddPTM_KYSE-520_SHP099_60min_R1 1 KSSTPEEVKK 10 2 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 1 KS(0.166)S(0.166)T(0.669)PEEVKK 113.53 0.0014458000000000001 8899700000.0 1041900.0 941990.0 866530.0 805230.0 802470.0 749600.0 805440.0 823460.0 914260.0 722330.0 True False 984103.7300238438 896735.3864441826 922387.9102970201 881758.8170987722 865619.8235702725 744921.4683499984 886861.7355368857 820603.6094570084 748253.4306190583 715930.7181642371 1.3745795578477844 1.2525449232623487 1.2883759376356596 1.2316259027964958 1.2090832277596115 1.0404937928352875 1.2387535735454172 1.1462053361268947 1.0451478217580912 1.0 19.449460456623253 -1.0000000000000024 0.12943383259326158 0.9392072633430276 2.3260889597905305 0.7532246619263747 0.057278876228839974 42.84193382318183 0.37640763205325656 0.3163168786119198 10.836156369111018 0.09999999999999944 1.0000000000000024 1.386881696447503 KSST(ph)PLSEAK ddPTM_KYSE-520_SHP099_60min_R1 1 KSSTPLSEAK 10 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 KSS(0.072)T(0.927)PLSEAK 167.32 9.7523e-05 1419100000.0 3642100.0 3929500.0 3291900.0 2723000.0 2708500.0 3112800.0 2954200.0 3441900.0 3917500.0 3445900.0 True False 3440065.452653651 3740720.921700251 3504101.141226224 2981793.101300198 2921643.5407430613 3093371.8605654687 3252839.3662135797 3429960.8522455026 3206180.7521385183 3415372.0068696355 1.0072300896459734 1.0952601690756418 1.0259793469578482 0.8730507526859907 0.8554393298494293 0.9057203298333242 0.9524114385404753 1.004271524550334 0.9387500821842093 1.0 21.703611296664228 -5.1049954215842 5.768427228926314 0.9298273097618837 1.0534235121359237 0.5135711025129368 0.04934145731710169 0.182388002534787 8.329435371512314 0.01457824336654406 0.025822949077007506 7.852439127585086e-06 5.1049954215842 0.12359620237404001 KSST(ph)VS(ph)EDVEATVPMLQR ddPTM_KYSE-520_SHP099_60min_R1 2 KSSTVSEDVEATVPMLQR 18 1 Q8IWT6 Q8IWT6 LRRC8A Volume-regulated anion channel subunit LRRC8A 2 KS(0.255)S(0.298)T(0.475)VS(0.973)EDVEATVPMLQR;KS(0.29)S(0.348)T(0.412)VS(0.95)EDVEATVPMLQR 106.35 0.00035628 186029000.0 193099.0 261690.0 193000.0 322740.0 294910.0 278920.0 204620.0 352570.0 448520.0 241530.0 True False 182387.41353668677 249118.01959530206 205441.0888109185 353413.1125646807 318117.73919163254 277179.1568198792 225304.9864987549 351347.0169604564 367080.07426909235 239390.2321074964 0.7618832728930521 1.0406356909476469 0.8581849267712256 1.4763054843690662 1.3288668313282896 1.1578549148797932 0.9411619869167568 1.4676748247718252 1.533396208514714 1.0 17.869004761314834 -5.245791697900994 24.850902047819147 1.2754724726332805 0.9022746930691615 0.44428050621493587 0.19721338621097456 759.0923265247947 1205552.2496201708 0.05545126572543932 0.09560649532294244 5.678168839968024e-06 5.245791697900994 -0.3731977795641189 KSSTPEEVK ddPTM_KYSE-520_SHP099_60min_R1 4 KSSTPEEVK 9 1 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 0 ;;; 116.55 0.0020262 6870770000.0 4054960.0 4287360.0 3016810.0 2712660.0 3609250.0 3740360.0 2997240.0 3722940.0 3796580.0 3647240.0 False True 3830023.2854376477 4081388.7901414363 3211278.399666665 2970470.3908090326 3893277.441176626 3717015.02582391 3300230.2694434957 3710025.990080726 3107216.7759933798 3614928.29110978 1.059501870301785 1.1290372758372071 0.8883380640119988 0.8217231855233014 1.0769999091687081 1.0282403208288233 0.9129448784806539 1.0263069392565325 0.8595514283464436 1.0 21.785535598219404 -4.753698663678115 24.998837975911087 0.9538760484172949 1.0942696101038178 0.34068618129922656 0.07925458967378338 200.61178085821925 647865.8496450998 0.020726363660780203 0.05271757937471874 1.763199022169799e-05 4.753698663678115 0.14039356168652295 KSSTPEEVKK ddPTM_KYSE-520_SHP099_60min_R1 2 KSSTPEEVKK 10 2 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 0 ; 107.09 0.00083732 4621700000.0 13543020.0 12529210.0 8820850.0 8013250.0 12683450.0 12432290.0 9333350.0 11216130.0 11160850.0 10126800.0 False True 12791761.683258966 11927287.944872381 9389456.104859022 8774826.87072854 13681565.35604121 12354695.466586187 10276856.102718001 11177223.862894421 9134320.98213278 10037084.43053117 1.2744499432871679 1.188321970132235 0.9354764493459706 0.8742406155354189 1.3631015511261542 1.2309048062807186 1.023888577788335 1.1135926912097236 0.9100572029012397 1.0 23.258836920704 -7.7492969172613515 23.349464011365775 0.9550286566422411 1.120928858979095 0.18243466498883898 0.14408888211113374 165.01380360993792 317324.91845192865 0.1061039566520504 0.03931792661361155 1.7811606120763745e-08 7.7492969172613515 0.16590020233685399 KSSVNGS(ph)SATSSG ddPTM_KYSE-520_SHP099_60min_R1 1 KSSVNGSSATSSG 13 1 P35226;R4GMX3 P35226 BMI1;COMMD3-BMI1 Polycomb complex protein BMI-1 1 KS(0.319)S(0.318)VNGS(0.359)S(0.003)ATSSG 124.33 7.990800000000001e-05 3057900000.0 1929200.0 2008200.0 1668200.0 1596200.0 1564600.0 2696800.0 2825900.0 3020500.0 3365500.0 2980700.0 True False 1822183.4302351456 1911723.0576303455 1775734.841214371 1747902.3680849702 1687725.1186437516 2679968.270872833 3111569.550126244 3010022.590489996 2754410.0373509116 2954293.3169495068 0.6167916434637114 0.6470999499820551 0.6010692408321624 0.5916482151778311 0.5712787924478784 0.9071435986051881 1.0532364989875598 1.0188638254775708 0.9323414237672963 1.0 21.494381640484665 -6.366394719624011 3.832340758106625 1.0003276826345717 0.6065389012805433 0.9660768759264581 0.03556668609586646 0.041402841825815585 1.093879083575026 0.013749935785917019 0.012016320327790863 4.301354931592051e-07 6.366394719624011 -0.3937887813540284 KSTLT(ph)PTQR ddPTM_KYSE-520_SHP099_60min_R1 3 KSTLTPTQR 9 1 A0A088AWL3;O75376-2;O75376;E7EVK1 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 KS(0.372)T(0.013)LT(0.615)PTQR;KS(0.093)T(0.007)LT(0.881)PT(0.019)QR;KS(0.132)T(0.409)LT(0.458)PT(0.002)QR 142.97 0.00044576 1710450000.0 3880420.0 3668400.0 2964140.0 2354360.0 2522470.0 2999110.0 2205420.0 2651790.0 3252500.0 2785280.0 True False 3665165.367174509 3492164.557619338 3155213.2071916875 2578117.6665358557 2720974.038108974 2980391.4420266333 2428365.3764250036 2642591.559422438 2661927.9888527244 2760604.5861150483 1.327667636868065 1.2649999116801445 1.14294282602492 0.9338960311458429 0.9856442504640458 1.079615478803825 0.87964983780687 0.9572510212849107 0.9642554396386084 1.0 21.396552828309964 -4.950864415129908 2.166182775859123 0.9701541653653507 1.3129716902609312 0.8716456377146766 0.05038777925664057 0.10420944562912787 0.963937757534533 0.01479242263286702 0.040265216479560925 1.1197874217209113e-05 4.950864415129908 0.3428175248955805 KSVAAEGALLPQT(ph)PPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 KSVAAEGALLPQTPPSPR 18 1 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 2 KSVAAEGALLPQT(1)PPS(1)PR 69.947 0.018299 1060400000.0 1456500.0 1414800.0 1527400.0 1236000.0 1424700.0 1492500.0 1246700.0 1281000.0 1931500.0 1415000.0 True False 1375705.0415392343 1346830.8843419051 1625858.6479264072 1353469.0683830513 1536815.7845658634 1483184.7538852354 1372728.6026194813 1276556.5099876474 1580788.2891526613 1402464.200853341 0.9809198984916514 0.9603317386086679 1.1592870940571174 0.9650649674761906 1.0957968008244168 1.0575562306565682 0.9787976062306853 0.9102239538170857 1.1271505455831368 1.0 20.419532514553595 -8.978885283412618 10.457790596322543 1.0000033659510037 1.024483673497357 0.009806277258450846 0.07718689082219488 45270889.55486674 0.0 0.07288736470233562 0.01822184117558391 1.0498196963442847e-09 8.978885283412618 0.02448030754635333 KSVAAEGALLPQTPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 KSVAAEGALLPQTPPSPR 18 1 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 KSVAAEGALLPQT(0.001)PPS(0.999)PR;KSVAAEGALLPQT(0.003)PPS(0.997)PR;KSVAAEGALLPQT(0.003)PPS(0.997)PR;KSVAAEGALLPQT(0.012)PPS(0.988)PR;KSVAAEGALLPQT(0.068)PPS(0.932)PR 161.49 1.8611e-08 8318430000.0 13366470.0 12440430.0 11823760.0 9950480.0 11020880.0 12519920.0 11314820.0 11664820.0 15272500.0 11989340.0 True False 12625005.263702657 11842773.069333889 12585938.488284899 10896170.627479112 11888160.555770498 12441778.535251481 12458632.427601617 11624357.462009467 12499398.988394523 11883123.775165375 1.06243152074943 0.9966043688010878 1.0591439360909747 0.9169449745403726 1.000423859979953 1.0470124498116937 1.0484307546841345 0.9782240496647265 1.0518613813075905 1.0 23.50241079854422 -6.215634390876327 24.321203381803493 1.025202584667702 1.0044077295510514 0.03978740514703161 0.043194181736177804 1134.0943851247978 602172.1831665147 0.014314231096385409 0.014314126483247069 6.086471729233904e-07 6.215634390876327 -0.02079485511665058 KSVS(ph)NGALR ddPTM_KYSE-520_SHP099_60min_R1 4 KSVSNGALR 9 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 KS(0.166)VS(0.834)NGALR;KS(0.243)VS(0.757)NGALR;KS(0.342)VS(0.658)NGALR;KS(0.011)VS(0.989)NGALR 157.22 0.00011332 11355420000.0 5082520.0 4815600.0 4714090.0 4124700.0 4240370.0 4205420.0 4092300.0 4201290.0 5076190.0 4061830.0 True False 4800582.483847568 4584251.347637041 5017967.784210679 4516710.247863725 4574062.99459504 4179172.4138586526 4505989.620999195 4186716.7055784566 4154481.856336451 4025845.34625592 1.1924408592377156 1.1387052788553949 1.2464382887627425 1.1219284049409186 1.1361745425340217 1.0380856824878602 1.1192654544441987 1.039959647101732 1.031952670561517 1.0 21.94086032119715 -6.332290250786942 0.5018142020922698 1.0068951706305866 1.2044976801946305 0.7373046591950522 0.03811264668968339 0.5360215412552077 0.28846213179197694 0.03457596323377143 0.042955077430440795 4.6527503365931814e-07 6.332290250786942 0.1976025095640439 KSYESSEDCSEAAGS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 4 KSYESSEDCSEAAGSPAR 18 1 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR;KSYESSEDCSEAAGS(1)PAR 178.55 8.744899999999999e-08 199400000.0 1110000.0 1016590.0 933840.0 897226.0 899333.0 873570.0 838750.0 867540.0 1098620.0 906580.0 True False 1048426.0872698576 967751.490467301 994036.8205968284 982498.089279166 970105.3905951931 868117.7255956623 923539.0354111559 864530.7062253577 899138.3019564567 898548.406508567 1.1667997847146163 1.0770165340647946 1.1062696382260524 1.093428113791662 1.079636203868716 0.9661335096779623 1.027812223272081 0.9621414939509049 1.0006564982405142 1.0 19.777236700986418 -6.120066073176085 3.6966990078827697 0.9913422440971728 1.1066319071720578 0.8062220769773175 0.02799423234331547 0.10337895248657752 2.532026856169509 0.00919910629245934 0.009297099996502337 7.584621744905151e-07 6.120066073176085 0.11528966307488508 KSYS(ph)GGTR ddPTM_KYSE-520_SHP099_60min_R1 3 KSYSGGTR 8 1 Q9UHD8 Q9UHD8 SEPT9 Septin-9 1 KS(0.02)Y(0.001)S(0.967)GGT(0.011)R;KS(0.044)YS(0.954)GGT(0.002)R;KS(0.015)YS(0.971)GGT(0.014)R 74.392 0.01256 742840000.0 1368870.0 1111030.0 1052460.0 1062060.0 1253790.0 1420830.0 1356220.0 1072580.0 1270580.0 1846640.0 True False 1292936.0523253067 1057654.451109971 1120303.255595538 1162997.8630800187 1352456.1399107408 1411962.0729398713 1493319.9530316764 1068859.470322053 1039874.7007152926 1830280.2062641797 0.7064142680996062 0.5778647703723846 0.6120938486693307 0.6354206635135043 0.7389339267735759 0.7714458519014716 0.8158969036111255 0.5839867942973184 0.5681505471983446 1.0 20.80363310375794 -5.737960875373124 7.024702525602793 0.7304059578682623 0.6270028737163614 0.1742611586212215 0.11769056203027989 0.3459702982504641 64.52152325370584 0.03536343565988085 0.04455012965073626 1.8282649130560874e-06 5.737960875373124 -0.10340308415190091 KSYS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 KSYSPR 6 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 KS(0.141)Y(0.008)S(0.851)PR;KS(0.117)Y(0.03)S(0.852)PR;KS(0.089)Y(0.039)S(0.872)PR 60.973 0.036545 5403700000.0 12297600.0 11186900.0 8443400.0 10883300.0 10860700.0 12898100.0 15158300.0 8614000.0 10776700.0 17159000.0 True False 11615427.613342162 10649464.53212077 8987675.073917665 11917645.559816534 11715375.301070029 12817598.173592746 16690648.89475164 8584120.044522723 8819922.938499356 17006984.609500002 0.6829798391687761 0.6261818174499929 0.5284696423431349 0.7007500643682247 0.6888567003539174 0.7536667121126758 0.9813996589041623 0.5047408603949511 0.5186059222734052 1.0 24.0196240336339 -5.456059839877802 7.553391914133977 0.7261215810994964 0.6134543092509029 0.11402083780249239 0.1570421733464284 0.7566539215266105 76.28837373250137 0.04557693508241485 0.06747732408749707 3.4989695266160666e-06 5.456059839877802 -0.11266727184859349 KT(ph)ASFGNILDVPEIVISGNGQPR ddPTM_KYSE-520_SHP099_60min_R1 2 KTASFGNILDVPEIVISGNGQPR 23 1 O43318-3;O43318 O43318-3 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 KT(0.592)AS(0.408)FGNILDVPEIVISGNGQPR;KT(0.594)AS(0.406)FGNILDVPEIVISGNGQPR 166.2 3.6976999999999995e-10 1021260000.0 591090.0 681710.0 535830.0 403450.0 400940.0 610110.0 421710.0 449470.0 657790.0 496540.0 True False 558301.0593912976 648959.6283324293 570370.4591583132 441793.76669833425 432491.6969634573 606302.0771811866 464340.56229298253 447910.8934770863 538351.9175364895 492141.0419022745 1.1344330422703512 1.3186456179797634 1.1589573122242727 0.8976974669510742 0.8787962395734069 1.2319681261242612 0.9435111538313598 0.9101270882545678 1.0938976262893987 1.0 18.90871230888876 -5.075454394088478 5.48756166830715 0.9939317989284905 1.2299274522097456 0.4519905762376665 0.1076991105270461 0.18456601385521704 9.840907338016535 0.029529637175620616 0.05299263252359665 8.40515266227922e-06 5.075454394088478 0.23599565328125516 KT(ph)ESSSR ddPTM_KYSE-520_SHP099_60min_R1 1 KTESSSR 7 1 Q8IY42 Q8IY42 C4orf19 Uncharacterized protein C4orf19 1 KT(0.499)ES(0.499)S(0.002)SR 67.98100000000001 0.05520800000000001 138010000.0 2125.2 0.0 4031.3 2714.9 0.0 2479.1 0.0 1791.7 2657.6 0.0 True False 2007.3109195188326 0.0 4291.164048308058 2972.923279735552 0.0 2463.627017324548 0.0 1785.4850108859234 2175.046832644117 0.0 0.0 KT(ph)EVVIYHGMS(ph)ALQK ddPTM_KYSE-520_SHP099_60min_R1 1 KTEVVIYHGMSALQK 15 1 A0A494C0F0;A0A494C0J6;A0A087WTM4;A0A0A0MRH8;A0A494C1P7;A0A0A0MSH9;A0A494C1F7;Q86WJ1-3;Q86WJ1-4;Q86WJ1-2;Q86WJ1 A0A494C0F0 CHD1L Chromodomain-helicase-DNA-binding protein 1-like 2 KT(1)EVVIY(0.186)HGMS(0.814)ALQK 53.211000000000006 0.028265 62824000.0 153950.0 199690.0 139230.0 141690.0 126540.0 193140.0 133300.0 179520.0 186020.0 190870.0 True False 145410.08660828345 190096.59265919894 148204.98857587637 155156.17499934832 136497.97808588768 191934.5416183546 146775.26488263134 178897.28702028297 152243.4571825927 189179.04029461293 0.7686374049780195 1.0048501798251914 0.7834112507657999 0.8201552072455807 0.7215280185020295 1.0145655740691488 0.7758537343991956 0.945650674311922 0.8047585871325936 1.0 17.529392731517593 -6.2555053486737995 24.999154729548916 0.8964993814179162 0.8280090540188442 0.1587343279388942 0.09910915329452498 1182.53079298905 4981823.901964205 0.03202087605461305 0.031242906886905515 5.552577786467191e-07 6.2555053486737995 -0.06849032739907202 KT(ph)GSPEIK ddPTM_KYSE-520_SHP099_60min_R1 1 KTGSPEIK 8 1 E9PKA2;Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95 E9PKA2 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 KT(0.715)GS(0.285)PEIK 79.693 0.02054 2475600000.0 3965000.0 3916600.0 3525600.0 3743300.0 3713500.0 3752500.0 3738100.0 3710400.0 4551800.0 4133600.0 True False 3745053.545968455 3728440.657063542 3752865.8171594474 4099062.106535813 4005731.32307527 3729079.255580797 4115983.6283403165 3697529.488413869 3725307.8615402994 4096979.5198921403 0.9141011146833972 0.9100462032970327 0.9160079514525491 1.0005083224442692 0.9777279343541183 0.9102020738631789 1.0046385656447403 0.9025013355476116 0.9092815435011924 1.0 21.96612925037185 -5.041155743843893 24.82088583539795 0.9548525285696549 0.9123119779822473 0.2271110794538752 0.03734171837262312 701.9605559831472 423349.32219278294 0.010250832799588444 0.017757480811170047 9.095870239934454e-06 5.041155743843893 -0.04254055058740758 KT(ph)GSYGALAEITASK ddPTM_KYSE-520_SHP099_60min_R1 2 KTGSYGALAEITASK 15 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YHI8;H0YIS4;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KT(0.417)GS(0.417)Y(0.166)GALAEITASK;KT(0.5)GS(0.5)YGALAEITASK 212.26 7.9792e-14 4782440000.0 5380700.0 5445100.0 5069500.0 4553700.0 4216900.0 4518400.0 3891000.0 4867000.0 6299000.0 4502700.0 True False 5082221.844840474 5183509.222738265 5396288.081486787 4986482.278880169 4548746.039121068 4490198.989584619 4284340.252500518 4850117.512966341 5155260.384868039 4462809.581047589 1.1387942399387532 1.161490117066904 1.2091683464164462 1.1173414837273101 1.0192561337231212 1.006137256819862 0.9600096474416062 1.086785672766221 1.1551602844004618 1.0 22.089520820382003 -5.586212571233617 4.096143823628215 1.037195876573019 1.1687587058518283 0.5631078471029438 0.05268017728294311 0.17182409422141767 5.8168471474825365 0.017153313811102154 0.022928046417333644 2.5929099170868226e-06 5.586212571233617 0.13156282927880936 KT(ph)MAS(ph)RRFQCAS(ph)VLLTVLEDEK ddPTM_KYSE-520_SHP099_60min_R1 2 KTMASRRFQCASVLLTVLEDEK 22 3 A0A1W2PR53;H7BXS7;Q0VDD8-4 A0A1W2PR53 DNAH14 3 KT(0.727)MAS(0.785)RRFQCAS(0.785)VLLT(0.704)VLEDEK;KT(0.878)MAS(0.878)RRFQCAS(0.878)VLLT(0.365)VLEDEK 50.144 0.049606 3507360000.0 1997220.0 1818830.0 1834510.0 1975050.0 1836330.0 1642090.0 1812210.0 1860860.0 2091100.0 1701730.0 True False 1886430.225240636 1731450.676680513 1952765.4499197803 2162758.1581795653 1980838.7237115435 1631841.107207641 1995405.872265218 1854405.110987988 1711408.952341253 1686653.9961259074 1.1184452943956475 1.0265594962911775 1.1577747744380928 1.282277315411001 1.1744191329468592 0.9675019956409752 1.1830558471675199 1.0994579298702578 1.0146769617670284 1.0 20.685732615699493 -6.207604761069594 24.999115241430054 1.0672866041365938 1.1525022299583325 0.261977915218783 0.08127787892443598 559.4250816730673 259779.4207492324 0.028668870229558333 0.0286688616333586 6.200050671998354e-07 6.207604761069594 0.0852156258217387 KT(ph)PAQPQR ddPTM_KYSE-520_SHP099_60min_R1 7 KTPAQPQR 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KT(1)PAQPQR;KT(1)PAQPQR;KT(1)PAQPQR;KT(1)PAQPQR;KT(1)PAQPQR;KT(1)PAQPQR;KT(1)PAQPQR 103.08 0.0039103 10506670000.0 2623523.0 2238332.0 2012089.0 2403264.0 2064447.0 1925315.0 2094847.0 2479430.0 2593898.0 2194287.0 True False 2477990.9493265604 2130799.170915174 2141791.4763962254 2631669.487992331 2226907.233803358 1913298.394925664 2306614.578496519 2470829.436033312 2122911.51004738 2174847.3243094543 1.1393861636302947 0.9797465537456674 0.9848008420895823 1.2100479231699284 1.023937270865868 0.8797391768790778 1.0605868985442013 1.1360932826941479 0.9761197884184515 1.0 21.052482695714144 -5.972287651664427 24.99366464453317 1.0143317577650526 1.0712797840656973 0.11809766651153719 0.08746321440604432 602.2515366535496 543165.5582774378 0.028450971745164803 0.032259683988764803 1.0658899032635921e-06 5.972287651664427 0.05694802630064477 KT(ph)PAQPQRR ddPTM_KYSE-520_SHP099_60min_R1 2 KTPAQPQRR 9 2 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 KT(1)PAQPQRR;KT(1)PAQPQRR 80.979 0.007781999999999999 548130000.0 316480.0 281620.0 155162.0 380440.0 172726.0 224351.0 174399.0 300910.0 188338.0 130690.0 True False 298924.22351276124 268090.552479762 165163.9907879776 416596.90321654367 186318.5535234951 222950.742190222 192028.9528902179 299866.213442922 154140.5668146178 129532.18827528153 2.307721559350855 2.0696828799805074 1.2750806806179436 3.2161650996831215 1.4383957841237986 1.7211995347164795 1.4824805744971927 2.3149938052899017 1.1899788683183412 1.0 16.982951121343433 KT(ph)PELGIVPPPPIPR ddPTM_KYSE-520_SHP099_60min_R1 8 KTPELGIVPPPPIPR 15 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 KT(1)PELGIVPPPPIPR;KT(1)PELGIVPPPPIPR;KT(1)PELGIVPPPPIPR;KT(1)PELGIVPPPPIPR;KT(1)PELGIVPPPPIPR;KT(1)PELGIVPPPPIPR;KT(1)PELGIVPPPPIPR;KT(1)PELGIVPPPPIPR 129.46 9.3031e-05 5232440000.0 2114450.0 2036780.0 1782120.0 1591220.0 1710990.0 1997480.0 1761930.0 1825620.0 2453670.0 1897340.0 True False 1997157.2434484267 1938930.0315308913 1896998.3066928175 1742449.0703822637 1845635.178798586 1985012.986392416 1940043.0791797056 1819287.3503229104 2008145.3799871642 1880531.043708185 1.0620176944860578 1.0310545194231682 1.0087567089305587 0.9265728828099323 0.9814436113531055 1.0555598074457762 1.0316463988566602 0.9674327666165461 1.0678607974624756 1.0 20.842708691833305 -6.236081815194847 24.76930675927087 1.0229111673915985 0.9997733565511958 0.06616507513990111 0.04170532504101625 2253.5756830061664 2201294.7815087135 0.014676006394221178 0.01467047524120804 5.806550196804086e-07 6.236081815194847 -0.023137810840402673 KT(ph)PESFLGPNAALVDLDSLVSR ddPTM_KYSE-520_SHP099_60min_R1 5 KTPESFLGPNAALVDLDSLVSR 22 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 KT(0.999)PES(0.001)FLGPNAALVDLDSLVSR;KT(0.999)PES(0.001)FLGPNAALVDLDSLVSR;KT(0.972)PES(0.028)FLGPNAALVDLDSLVSR;KT(0.991)PES(0.009)FLGPNAALVDLDSLVSR;KT(1)PESFLGPNAALVDLDSLVSR 210.0 4.6199e-19 554881700.0 207354.0 180448.0 162713.0 162376.0 179030.0 203426.0 156103.0 190885.0 225408.0 169733.0 True False 195851.6602700488 171779.00722203005 173201.74033000498 177808.16621987548 193118.6424586415 202156.3428769565 171883.41465846545 190222.86448789394 184479.58927327106 168229.29767027593 1.1641947210283896 1.021100424247811 1.0295575308735752 1.0569393600416368 1.1479489312090447 1.2016714429443587 1.0217210500120584 1.1307356514126612 1.096596085390817 1.0 17.360069451866277 -4.2195486110031055 22.63811372525638 1.0846058018612608 1.1641954802419516 0.1388094598462125 0.06239371643155929 19206.51933208975 10378613.122246014 0.01607386679843635 5.328553013707554 6.03186188932065e-05 4.2195486110031055 0.07958967838069086 KT(ph)PESFLGPNAALVDLDSLVSRPGPTPPGAK ddPTM_KYSE-520_SHP099_60min_R1 2 KTPESFLGPNAALVDLDSLVSRPGPTPPGAK 31 2 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 KT(0.998)PES(0.002)FLGPNAALVDLDSLVSRPGPTPPGAK;KT(0.999)PES(0.001)FLGPNAALVDLDSLVSRPGPTPPGAK 226.44 6.6899e-23 2058380000.0 838670.0 813080.0 642180.0 554280.0 532840.0 706330.0 517880.0 524390.0 837500.0 541490.0 True False 792147.3032528039 774018.4163420387 683575.9503243288 606958.6045496411 574771.4765551172 701921.5324701901 570232.3644217348 522571.013483546 685431.111656926 536692.8198728453 1.4759789472131963 1.442200058732705 1.2736819368783123 1.1309236532984424 1.0709505610514662 1.3078645856236557 1.0624930002917419 0.9736873573366509 1.2771385907851722 1.0 19.03373706162897 -4.937817058677707 1.972161165646382 1.1182169627058085 1.4799176039436344 0.6480931549357157 0.10091114541848276 0.2125244297930565 1.6096640489618261 0.029054618165321854 0.08540211341341168 1.1539392384697856e-05 4.937817058677707 0.36170064123782586 KT(ph)PESFLGPNAALVNLDSLVTR ddPTM_KYSE-520_SHP099_60min_R1 2 KTPESFLGPNAALVNLDSLVTR 22 1 O95208-5;O95208-3;O95208-2;O95208;I3L356;I3L2H1;I3L2B2 O95208-5 EPN2 Epsin-2 1 KT(0.976)PES(0.024)FLGPNAALVNLDSLVTR;KT(0.998)PES(0.002)FLGPNAALVNLDSLVTR 198.48 1.1705999999999998e-13 395723000.0 251440.0 260965.0 213631.0 216240.0 315006.0 331951.0 260290.0 248475.0 349445.0 244531.0 True False 237492.12196678645 248427.84968354888 227401.99608168527 236791.3845850731 339795.18006103387 329879.170678029 286602.65338559746 247613.09821950103 285994.5967915878 242364.6455822391 0.9798958977546116 1.0250168669887638 0.9382638937927243 0.9770046452782862 1.401999781134475 1.3610861843547823 1.1825266539890098 1.0216551907752611 1.180017803770576 1.0 17.886819738581153 -5.709823718905631 24.894906611985988 1.2003563620086717 0.980272515429822 0.42676230181313113 0.11961610236133674 100.21536082815827 48334.48858814961 0.03794553293637521 0.04898741040519834 1.9506362066565097e-06 5.709823718905631 -0.22008384657884972 KT(ph)PESKPTILVK ddPTM_KYSE-520_SHP099_60min_R1 1 KTPESKPTILVK 12 2 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 KT(0.723)PES(0.276)KPTILVK 87.287 0.0024743 975230000.0 1835400.0 1605300.0 1544300.0 1657800.0 1780000.0 1766800.0 1740600.0 1654100.0 1954300.0 1691000.0 True False 1733586.7032208105 1528178.9783955766 1643848.0489673638 1815356.8135642547 1920075.873185399 1755772.745838815 1916556.834618966 1648362.3131698433 1599448.3838938894 1676019.055578093 1.0343478479263837 0.9117909329906017 0.980805106896811 1.0831361418728627 1.1456169706394692 1.0475851930175182 1.1435173294959387 0.9834985513343639 0.9543139611513588 1.0 20.676607121244334 -5.180718337469364 5.90870214265802 1.0579258392036892 0.9675809044006318 0.21120419701582438 0.06560576686223078 0.32598080585637124 18.78649461925237 0.018657612154702994 0.03272510700089497 6.5960154241642465e-06 5.180718337469364 -0.09034493480305739 KT(ph)PEVVQSTRPIIEGSISQGTPIKFDNNSGQSAIK ddPTM_KYSE-520_SHP099_60min_R1 2 KTPEVVQSTRPIIEGSISQGTPIKFDNNSGQSAIK 35 3 A0A088AWL3;O75376-2;O75376 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 KT(1)PEVVQSTRPIIEGSISQGTPIKFDNNSGQSAIK;KT(0.985)PEVVQS(0.007)T(0.008)RPIIEGSISQGTPIKFDNNSGQSAIK 170.74 1.8687e-10 1521870000.0 366830.0 331050.0 368460.0 316630.0 255679.0 236835.0 198334.0 267859.0 340860.0 199313.0 True False 346481.2086425243 315145.86108381907 392211.5211568447 346722.4200017196 275799.4826854883 235356.8249155173 218383.53627330693 266929.8596477607 278968.4163813491 197547.2418831678 1.7539156980356028 1.5952936526960004 1.98540621179011 1.7551367293033435 1.3961191260194865 1.1913951451405767 1.1054749952037397 1.3512203820371573 1.4121605228299514 1.0 17.591838178260602 -5.867432002155671 3.1813123236142014 1.231144290996466 1.7792203337570192 0.7807828744544101 0.14008657262910862 0.12031065406519056 2.4237944604055874 0.046859931022577836 0.05483568097461644 1.356962974477445e-06 5.867432002155671 0.5480760427605531 KT(ph)PPAPSPFDLPELK ddPTM_KYSE-520_SHP099_60min_R1 3 KTPPAPSPFDLPELK 15 1 O95239 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 KT(0.999)PPAPS(0.001)PFDLPELK;KT(0.995)PPAPS(0.005)PFDLPELK;KT(1)PPAPSPFDLPELK 111.83 0.00034262 2915688000.0 7304990.0 6973000.0 6244750.0 5414590.0 6910580.0 7285950.0 6178910.0 6530780.0 7662410.0 6823300.0 True False 6899767.642563461 6638006.613313608 6647296.576953277 5929191.005644163 7454403.330178399 7240475.683464076 6803534.523150343 6508126.24847551 6271109.497637202 6762850.870447075 1.0202454223432158 0.9815396998211179 0.9829133754821124 0.8767295212074075 1.102257535021707 1.070624773807178 1.0060157548174027 0.9623347273433628 0.92728785800102 1.0 22.68920011015604 -7.277346270406869 6.555075438471307 0.9582705749787893 1.005234972476837 0.09842828891867361 0.05848086613656456 0.41531438473136556 84.48266088989566 0.033230811004548784 0.016641636480394167 5.2802408127720686e-08 7.277346270406869 0.046964397498047705 KT(ph)PPEDCEGPFRPAEILK ddPTM_KYSE-520_SHP099_60min_R1 2 KTPPEDCEGPFRPAEILK 18 2 P49790-3;P49790 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 KT(1)PPEDCEGPFRPAEILK;KT(1)PPEDCEGPFRPAEILK 153.83 1.5079e-06 1235160000.0 791990.0 697640.0 614180.0 634910.0 662420.0 645960.0 703530.0 693940.0 746590.0 668430.0 True False 748056.7359070776 664124.3272210113 653771.0255227446 695251.6555073482 714548.6853457706 641928.3240333047 774649.67819113 691532.884106813 611028.0760023225 662508.2302306715 1.1291282157304219 1.0024393613793705 0.9868119303138547 1.0494234241667855 1.0785506545284422 0.9689363765485581 1.1692680073142838 1.0438102540492753 0.9222950721526514 1.0 19.33757885147431 -7.694407450889537 8.163202292119557 0.961600548521744 1.0516071453182252 0.26896817153755526 0.06090628513782382 0.31237551424704196 33.36577863122003 0.04117552506661102 0.015322876391707648 2.0211220916718562e-08 7.694407450889537 0.09000659679648115 KT(ph)PQGPPEIYSDTQFPSLQSTAK ddPTM_KYSE-520_SHP099_60min_R1 2 KTPQGPPEIYSDTQFPSLQSTAK 23 1 Q9UKY7-2;Q9UKY7;H0Y8K3;D6RFH2;D6RDN0;D6R9V8;Q9UKY7-3 Q9UKY7-2 CDV3 Protein CDV3 homolog 1 KT(0.952)PQGPPEIY(0.048)SDTQFPSLQSTAK;KT(0.808)PQGPPEIY(0.005)S(0.185)DT(0.002)QFPSLQSTAK 111.66 0.00017228 179350000.0 454380.0 440610.0 397440.0 354970.0 354000.0 455600.0 345620.0 428730.0 535800.0 410800.0 True False 429174.6356159261 419442.4342309066 423059.6183264839 388706.2420743776 381857.7860155234 452756.4314037609 380558.6425261447 427242.83569633466 438512.22641884297 407160.6315975634 1.0540671231695145 1.0301645141504803 1.0390484381226597 0.9546754079568625 0.9378553729942898 1.1119847948641173 0.9346646335451408 1.049322558568532 1.0770005555258777 1.0 18.635238548265182 KT(ph)PSESNSPSSSSLSALSDSANSKDDSDGSQK ddPTM_KYSE-520_SHP099_60min_R1 1 KTPSESNSPSSSSLSALSDSANSKDDSDGSQK 32 2 H0Y9K9;G5E9Z1;A0A590UJE4;A0A494C0H4;H0Y9M2;Q17R98-3;Q17R98-2;Q17R98;A0A5F9ZGT0 H0Y9K9 ZNF827 Zinc finger protein 827 1 KT(0.206)PS(0.206)ES(0.177)NS(0.131)PS(0.086)S(0.086)S(0.086)S(0.019)LS(0.004)ALSDSANSKDDSDGSQK 61.938 0.025337000000000002 506450000.0 288730.0 272780.0 259490.0 267390.0 253640.0 228680.0 238430.0 229220.0 347190.0 296560.0 True False 272713.57133101474 259675.23934887227 276217.1405986795 292802.66520626534 273600.02498581127 227252.72329546078 262532.8312525569 228424.88932035002 284149.0479476641 293932.70912018884 0.9278095389496185 0.8834513182494816 0.939729169392082 0.9961554332714246 0.930825377702134 0.7731454045236501 0.8931732437617462 0.7771332765382952 0.9667146225344924 1.0 18.165126386878782 -6.040671931115949 24.99430650888405 0.8669320397480372 0.936974912110074 0.10496947802358902 0.07188233208887866 863.9193656421603 530906.3023609297 0.02262900147942013 0.022631889009860462 9.106008867341427e-07 6.040671931115949 0.07004287236203677 KT(ph)PSKPPAQLSPSVPK ddPTM_KYSE-520_SHP099_60min_R1 1 KTPSKPPAQLSPSVPK 16 2 P18887;F5H8D7;M0QYS5 P18887 XRCC1 DNA repair protein XRCC1 1 KT(0.999)PS(0.001)KPPAQLSPSVPK 128.05 5.9145e-05 1035600000.0 812930.0 608750.0 518990.0 608570.0 625990.0 598750.0 579660.0 571300.0 602000.0 706920.0 True False 767835.1523642222 579504.7362476216 552444.9258133603 666408.3098267572 675251.8516041174 595012.9791549649 638257.6897364309 569318.2936424225 492691.97518503916 700657.2387754384 1.0958784265273458 0.8270873462471336 0.7884667355737113 0.9511188537657311 0.9637406341284324 0.8492211972217523 0.9109414053181478 0.8125489356785048 0.7031854492021421 1.0 19.41834932544341 -7.261333887761061 24.221476109542333 0.8184003891434195 0.9053461002705643 0.08157207463230076 0.10538562806766189 13.430482721696682 3084932.4892335455 0.05195673026960972 0.027558559940485727 5.478556088501393e-08 7.261333887761061 0.08694571112714478 KT(ph)PVASDQR ddPTM_KYSE-520_SHP099_60min_R1 2 KTPVASDQR 9 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 KT(0.998)PVAS(0.002)DQR;KT(0.97)PVAS(0.03)DQR 135.1 0.0005788 1420090000.0 2178260.0 2076610.0 2000540.0 2084260.0 1980180.0 1629370.0 1935080.0 1992290.0 2426780.0 2103430.0 True False 2057427.5755463452 1976846.5385448437 2129498.009377173 2282347.4437443796 2136008.9003170016 1619200.4974458849 2130696.770960861 1985379.2109939791 1986137.9261454283 2084795.2466437763 0.9868727295203262 0.9482209544209607 1.0214422796700837 1.0947585607836714 1.0245653158292989 0.7766712342867086 1.0220172817407271 0.9523137651959621 0.9526776930937596 1.0 20.991474268985957 KT(ph)PVSEAR ddPTM_KYSE-520_SHP099_60min_R1 1 KTPVSEAR 8 1 E9PD50;Q92540-2;Q92540;Q92540-5;Q92540-4;B1ALB4 E9PD50 SMG7 Protein SMG7 1 KT(0.998)PVS(0.002)EAR 70.942 0.020227000000000002 0.0 304680.0 170050.0 166920.0 201410.0 257530.0 185490.0 259710.0 150650.0 335720.0 172530.0 True False 287778.7930354778 161880.54274974624 177679.93028144285 220551.94584387518 277796.1458547394 184332.28810597816 285964.0213253432 150127.4303119745 274761.7108124934 171001.51842630884 1.6829019746949954 0.9466614345854877 1.039054693295089 1.2897660083581042 1.6245244393806508 1.0779570251910604 1.6722893688723361 0.877930393212679 1.606779362786178 1.0 17.38364961017009 -2.9392023302229076 14.386853961477719 1.2772715962229226 42.154307069689835 0.0 0.3149635954879974 0.0 0.0 0.06713176202545804 0.0 0.0011502643759880287 2.9392023302229076 40.87703547346691 KT(ph)QGY(ph)LES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 KTQGYLESPK 10 1 P17544-4;P17544-2;P17544;P17544-3;P17544-1 P17544-4 ATF7 Cyclic AMP-dependent transcription factor ATF-7 3 KT(1)QGY(1)LES(1)PK 58.831 0.025727999999999997 329450000.0 811150.0 731920.0 1011900.0 636360.0 1176700.0 747340.0 549530.0 661790.0 957550.0 890890.0 True False 766153.8925125632 696757.4645656823 1077128.693097246 696839.4630713898 1269299.5954928424 742675.5738483034 605081.8552959678 659494.4049529477 783683.0578711521 882997.4077019326 0.8676739997533361 0.7890821178955058 1.219854875792393 0.7891749817080065 1.4374896057693878 0.841084659332322 0.6852589260377774 0.7468814734907679 0.8875258874323837 1.0 19.75204967686202 -6.4963806649598235 24.996196089961206 0.8023016037043951 1.0193256425863986 0.17417387048169297 0.20178476535114362 1162.8529116098532 1096945.7017572918 0.06986851797907681 0.061421273512807406 3.1887416548391624e-07 6.4963806649598235 0.2170240388820035 KT(ph)SDANETEDHLESLICK ddPTM_KYSE-520_SHP099_60min_R1 9 KTSDANETEDHLESLICK 18 1 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 KT(0.498)S(0.498)DANET(0.004)EDHLESLICK;KT(0.475)S(0.475)DANET(0.05)EDHLESLICK;KT(0.492)S(0.492)DANET(0.016)EDHLESLICK;KT(0.5)S(0.5)DANETEDHLESLICK;KT(0.5)S(0.5)DANETEDHLESLICK;KT(0.5)S(0.5)DANETEDHLESLICK;KT(0.5)S(0.5)DANETEDHLESLICK;KT(0.5)S(0.5)DANETEDHLESLICK;KT(0.5)S(0.5)DANETEDHLESLICK 330.76 4.2666e-59 82700600000.0 28000700.0 33272860.0 32000010.0 52584190.0 43159310.0 54916510.0 66052330.0 77656810.0 90219300.0 71708790.0 True False 26447445.35298842 31674381.86201892 34062781.84642629 57581775.60758673 46555702.15411763 54573755.69084493 72729544.12501875 77387436.65134564 73837749.36347434 71073505.90919447 0.37211398276565144 0.44565666849876534 0.4792613141941509 0.8101721572755232 0.6550359597231423 0.7678494959932033 1.0233003591794119 1.0888366299281482 1.038892740957672 1.0 26.08280853043158 -5.73236871295988 0.541396285359339 1.0860382696918724 0.30412377871443574 0.8920525587781462 0.08401349939871074 0.3672238147526944 0.21398818746250448 0.06900823711211383 0.14986329014798985 1.8519586559197538e-06 5.73236871295988 -0.7819144909774367 down KT(ph)SDDGGDS(ph)PEHDTDIPEVDLFQLQVNTLR ddPTM_KYSE-520_SHP099_60min_R1 1 KTSDDGGDSPEHDTDIPEVDLFQLQVNTLR 30 1 Q9HAJ7 Q9HAJ7 SAP30L Histone deacetylase complex subunit SAP30L 2 KT(0.434)S(0.434)DDGGDS(0.566)PEHDT(0.566)DIPEVDLFQLQVNTLR 75.717 0.0097351 56122000.0 26991.0 38334.0 31651.0 49673.0 32869.0 28290.0 31399.0 32819.0 44267.0 32142.0 True False 25493.755424775452 36492.37709949293 33691.27410339055 54393.90698526797 35455.60330097241 28113.431616357335 34573.11734470929 32705.158549012165 36229.2286802593 31857.24688609761 0.8002497992348747 1.1454968858410068 1.0575701730865292 1.707426482261569 1.1129525231022117 0.8824815187851633 1.0852512606730267 1.026615974253713 1.1372366485337944 1.0 14.95933397361306 -6.00016107480092 24.999999999998806 1.0278920545032095 1.197229693161664 0.09434088936006535 0.21845937893599846 13.902169760633521 2158305.3154725614 0.07067777512396353 0.07931633401556627 9.99629180335157e-07 6.00016107480092 0.16933763865845441 KT(ph)SDFNTFLAQEGCTK ddPTM_KYSE-520_SHP099_60min_R1 2 KTSDFNTFLAQEGCTK 16 1 Q9UHD1;Q9UHD1-2;E9PHZ2 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 KT(0.5)S(0.5)DFNT(0.001)FLAQEGCTK;KT(0.5)S(0.5)DFNTFLAQEGCTK 210.29 1.6547e-17 776330000.0 975940.0 749340.0 726940.0 719800.0 848180.0 776020.0 768400.0 719690.0 954320.0 843230.0 True False 921802.662711842 713340.5816177293 773799.7155451244 788209.5755842379 914926.9405159494 771176.5713299976 846077.3708613199 717193.5633669093 781039.5444494777 835759.638223012 1.1029518782119871 0.8535236077377827 0.925863944794431 0.9431055766944253 1.0947249647772683 0.9227253100779902 1.0123453349102207 0.858133763065901 0.9345265178276856 1.0 19.67272856195387 -10.072335898474487 4.972293574034248 1.0000010376085011 0.9574742704807818 0.01875159537116966 0.08162497136168612 9.142857488473382e-07 1.7056032724052033e-07 0.07696014780214083 0.01866512210070297 8.465723922989494e-11 10.072335898474487 -0.0425267671277193 KT(ph)SEDQAAILPGK ddPTM_KYSE-520_SHP099_60min_R1 2 KTSEDQAAILPGK 13 1 H3BRS1;Q12968;I3L3K7;H3BR83;Q12968-5;Q12968-6;Q12968-4;Q12968-3;Q12968-2 H3BRS1 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 1 KT(0.5)S(0.5)EDQAAILPGK;KT(0.5)S(0.5)EDQAAILPGK 149.73 1.1534000000000002e-05 1031700000.0 1316330.0 1356800.0 1208710.0 1436720.0 1496060.0 1571880.0 1920930.0 2174190.0 2255800.0 2088800.0 True False 1243310.5508611996 1291617.2914016799 1286625.3806043793 1573265.4368343828 1613791.4105830027 1562069.3138607196 2115116.350870168 2166648.2423497583 1846203.5840903844 2070294.8570618087 0.6005475725451607 0.6238808385172541 0.6214696308671587 0.7599233662142131 0.7794983429912578 0.7545153814841766 1.0216498116949246 1.0465408996980727 0.8917587645996196 1.0 20.98140482425983 -6.171656621593625 0.7722679640555437 1.0077741393409472 0.6032234844117114 0.8468473954600465 0.06359874962202842 0.2468983359809759 0.3246813653564375 0.044009614709706005 0.046975722098502086 6.735089610690586e-07 6.171656621593625 -0.4045506549292358 KT(ph)SFDQDS(ph)DVDIFPSDFPTEPPSLPR ddPTM_KYSE-520_SHP099_60min_R1 1 KTSFDQDSDVDIFPSDFPTEPPSLPR 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KT(0.407)S(0.348)FDQDS(0.645)DVDIFPS(0.372)DFPT(0.073)EPPS(0.155)LPR 102.56 0.0025691 191290000.0 108980.0 117950.0 107440.0 99214.0 106170.0 100030.0 120880.0 105310.0 145470.0 125400.0 True False 102934.66215375591 112283.50495344044 114365.75431007807 108643.26873022321 114524.97497533346 99405.67566575542 133099.73007511237 104944.70418953882 119056.3150002783 124289.05355972366 0.8281876738589333 0.9034062271580957 0.9201595074913237 0.87411775710415 0.9214405588847908 0.7997942925680802 1.0708885960834433 0.8443599913576505 0.957898637011256 1.0 16.923339714749027 -13.999999997881966 0.046936824887847346 1.4383540843680975 0.6764585137075932 0.22522855483656123 0.06871888179697755 984.4866585249558 3.4208582928161326 55.177858486619094 13.481349416108106 1.000000004876953e-14 13.999999997881966 -0.7618955706605043 KT(ph)SLDLR ddPTM_KYSE-520_SHP099_60min_R1 1 KTSLDLR 7 1 Q5T457;A0A0A0MRN9;Q9GZV1-2;Q9GZV1 Q5T457 ANKRD2 Ankyrin repeat domain-containing protein 2 1 KT(0.5)S(0.5)LDLR 72.928 0.043608999999999995 1521300000.0 6538600.0 5699500.0 5528700.0 5335700.0 5296400.0 5568300.0 5267200.0 5517700.0 6140100.0 5520400.0 True False 6175890.82362406 5425687.464876081 5885088.848232764 5842803.323763298 5713196.54760626 5533546.174243993 5799659.978918201 5498560.386540868 5025212.619325011 5471493.550806215 1.1287394869932823 0.9916282299330528 1.0755909320893937 1.0678625990342931 1.044174957816487 1.0113410758619343 1.05997748604924 1.004946882507184 0.9184352631804811 1.0 22.383503267831177 -7.503248797492241 4.352050658555373 0.9584906715950823 1.050529398475749 0.48287928782352496 0.039489180038651914 0.16207182081651228 7.430284118031585 0.0244767763707768 0.009803314620770904 3.138710082672056e-08 7.503248797492241 0.09203872688066683 KT(ph)SLDVSNSAEPGFLAPGAR ddPTM_KYSE-520_SHP099_60min_R1 3 KTSLDVSNSAEPGFLAPGAR 20 1 H0Y6F6;A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-5;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 H0Y6F6 NAV1 Neuron navigator 1 1 KT(0.499)S(0.499)LDVS(0.002)NSAEPGFLAPGAR;KT(0.621)S(0.379)LDVSNSAEPGFLAPGAR;KT(0.5)S(0.5)LDVSNSAEPGFLAPGAR 187.21 1.2279e-12 6629750000.0 2912030.0 2790530.0 2391490.0 1962490.0 2178720.0 2585930.0 2249270.0 2303020.0 2690970.0 2635880.0 True False 2750493.890912113 2656468.750129078 2545649.271919288 2149004.4595558643 2350172.8687789305 2569790.251667972 2476648.162359764 2295031.3611489087 2202357.68183336 2612528.1538836085 1.052809282389326 1.0168191857301712 0.974400703829774 0.8225765744806611 0.8995780065701193 0.9836411706598817 0.9479890804920688 0.878471436848353 0.842998640439332 1.0 21.317015153790194 -4.927495259734301 3.460990997463194 0.9091024103362437 1.0351115481542434 0.4569339559945098 0.05413249594551002 0.21083904774960874 5.049315408374703 0.015183689157882872 0.03496901163517671 1.1816932104964173e-05 4.927495259734301 0.12600913781799972 KT(ph)SLFEEDEEDDLFAIAK ddPTM_KYSE-520_SHP099_60min_R1 8 KTSLFEEDEEDDLFAIAK 18 1 Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 Q641Q2 FAM21A WASH complex subunit FAM21A 1 KT(0.686)S(0.314)LFEEDEEDDLFAIAK;KT(0.5)S(0.5)LFEEDEEDDLFAIAK;KT(0.5)S(0.5)LFEEDEEDDLFAIAK;KT(0.5)S(0.5)LFEEDEEDDLFAIAK;KT(0.593)S(0.407)LFEEDEEDDLFAIAK;KT(0.5)S(0.5)LFEEDEEDDLFAIAK;KT(0.5)S(0.5)LFEEDEEDDLFAIAK;KT(0.5)S(0.5)LFEEDEEDDLFAIAK 206.46 2.2341999999999997e-13 3413905000.0 1937549.0 1858328.0 1801915.0 1694219.0 1717078.0 2004476.0 1931396.0 2259002.0 2707823.0 2196475.0 True False 1830069.2945618257 1769051.1334728033 1918069.3240659388 1855237.064374484 1852202.269762606 1991965.3217613818 2126640.356288483 2251166.0493170326 2216150.60186292 2177015.9403316937 0.8406320140600317 0.8126036657330437 0.8810543315423307 0.8521926872486827 0.8507986714513451 0.914998041520028 0.9768602594450753 1.0340604345662445 1.017976286165945 1.0 21.053920540448498 -6.6562210922293366 1.6366311398080535 1.0206771122748444 0.8455660175515812 0.9456930029411912 0.018196194825056158 0.07900760348425387 0.43237536817161704 0.009772067276611634 0.006514429687675777 2.2068809599343761e-07 6.6562210922293366 -0.17511109472326314 KT(ph)SPASLDFPESQK ddPTM_KYSE-520_SHP099_60min_R1 4 KTSPASLDFPESQK 14 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KT(0.5)S(0.5)PASLDFPESQK;KT(0.5)S(0.5)PASLDFPESQK;KT(0.5)S(0.5)PASLDFPESQK;KT(0.5)S(0.5)PASLDFPESQK 247.4 2.0315e-18 17905400000.0 11879900.0 10772640.0 10465890.0 8927550.0 9547280.0 10848510.0 9338260.0 11126300.0 12436000.0 10549160.0 True False 11220898.26500649 10255106.204337697 11140538.015416062 9776021.667834224 10298596.61940758 10780800.425039554 10282262.453434981 11087705.462197948 10177935.886048414 10455702.649522277 1.073184523425518 0.9808146375323954 1.0654987415814732 0.9349942319066326 0.9849741298714271 1.0310928673485307 0.983411904307051 1.0604457523191468 0.9734339457820604 1.0 23.317786682133157 -4.249481063244655 24.174188184120364 1.0032630084404865 1.0731845912600062 0.23757566930421847 0.03835515522019743 1703.6694630614682 3443934.550946623 0.009145187561011825 0.1402136679571483 5.630136662201162e-05 4.249481063244655 0.06992158281951966 KT(ph)SPGPTHR ddPTM_KYSE-520_SHP099_60min_R1 1 KTSPGPTHR 9 1 Q5W0W3;Q14678-2;Q14678 Q5W0W3 KANK1 KN motif and ankyrin repeat domain-containing protein 1 1 KT(0.586)S(0.413)PGPT(0.001)HR 56.225 0.041477 0.0 141720.0 182820.0 103290.0 108320.0 150140.0 165050.0 104350.0 129920.0 162990.0 286840.0 True False 133858.5090881842 174037.05278158552 109948.2386698433 118614.70023240455 161955.16382025596 164019.861727811 114898.71635785892 129469.33784355609 133395.1246435374 284298.82075814303 0.47083737009960897 0.6121624152976747 0.3867347686376012 0.4172184039177276 0.5696652676517201 0.5769276892898018 0.4041477064570903 0.4553987860318895 0.46920744971017125 1.0 18.117048589316102 -10.45741930974416 5.939687788352493 1.0003080150830215 0.4855633708400991 0.8159372969131877 0.07342261010409384 0.00030985460108048354 2.8304738505100157e-05 0.07355398582999688 0.01782910598651867 3.488033844516941e-11 10.45741930974416 -0.5147446442429224 KT(ph)SQSEEEEAPR ddPTM_KYSE-520_SHP099_60min_R1 2 KTSQSEEEEAPR 12 1 Q7RTP6;A0A5F9ZHV5;J3KSK6;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 KT(0.833)S(0.167)QSEEEEAPR;KT(0.632)S(0.365)QS(0.004)EEEEAPR 121.68 0.0015042999999999999 1806630000.0 1990770.0 1926470.0 2062390.0 2289560.0 2341820.0 2714390.0 2952020.0 3582800.0 4194700.0 3471300.0 True False 1880338.019598394 1833919.4895095753 2195334.9593406743 2507159.094018683 2526107.91086687 2697448.4851581524 3250438.9905388257 3570372.103031809 3433048.21978186 3440546.9826305346 0.5465229886675596 0.5330313751761117 0.6380773087604198 0.7287094484324662 0.7342169496942859 0.7840173375850161 0.9447448347453293 1.0377338606496849 0.9978204736379035 1.0 21.714206514018063 -6.144342737654855 0.5998852151315948 1.0460181496667418 0.5214241896024179 0.9509180472804171 0.04010533290165543 0.18371642437729405 0.14485497457193142 0.034985205713680266 0.04444378419091497 7.17228043961287e-07 6.144342737654855 -0.5245939600643239 KT(ph)SSDDES(ph)EEDEDDLLQR ddPTM_KYSE-520_SHP099_60min_R1 1 KTSSDDESEEDEDDLLQR 18 1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 2 KT(0.352)S(0.296)S(0.352)DDES(1)EEDEDDLLQR 93.633 0.0012993 800890000.0 515010.0 490950.0 496570.0 421530.0 451910.0 495260.0 462630.0 530860.0 567580.0 481870.0 True False 486441.36865301797 467364.0250690267 528579.6967400918 461592.084462384 487472.745983828 492168.8986326313 509397.15523369715 529018.5705636553 464521.7795274485 477601.00668918726 1.0185099315956505 0.9785658290565066 1.1067390757911035 0.9664805517522254 1.0206694273177381 1.0305022220209106 1.0665747100596088 1.1076579888951732 0.9726147412200694 1.0 18.865446351960735 -6.5282145233076205 23.21415359892073 1.0460912325810945 1.0187925710708439 0.017459851050609543 0.04881205095172375 187.205006717335 814432.7591024671 0.018058479402030914 0.014049917820003956 2.9633672484781285e-07 6.5282145233076205 -0.02729866151025062 KT(ph)STPS(ph)PQPSKR ddPTM_KYSE-520_SHP099_60min_R1 2 KTSTPSPQPSKR 12 2 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 2 KT(0.863)S(0.129)T(0.01)PS(0.956)PQPS(0.042)KR;KT(0.832)S(0.061)T(0.132)PS(0.974)PQPS(0.001)KR 78.32600000000001 0.03456 1095410000.0 1320720.0 1266680.0 1255610.0 1233910.0 1290460.0 1225480.0 1201680.0 1400780.0 1538870.0 1180090.0 True False 1247457.0288099523 1205826.7914745584 1336548.629647032 1351180.435411431 1392011.8602869816 1217831.3247512765 1323157.5416666223 1395921.0211245092 1259449.9997558147 1169635.320696126 1.0665350188531495 1.0309425255359872 1.142705427920529 1.1552151439880045 1.1901246787404682 1.0412060094307565 1.1312564850376827 1.193466883587019 1.0767886173326522 1.0 20.157627352949916 -4.761538485528719 24.999999869914703 1.125127108179698 1.0487387575128515 0.1575088030498326 0.05984683612469161 3.749430644749788 946930.2595050429 0.014918820765335107 0.034611222352596865 1.7316555712061025e-05 4.761538485528719 -0.07638835066684657 KT(ph)SYAQHQQVR ddPTM_KYSE-520_SHP099_60min_R1 2 KTSYAQHQQVR 11 1 P61247;H0Y8L7;E9PFI5;H0Y9Y4;D6RG13;D6RB09;D6RAT0;D6RAS7;D6R9B6 P61247 RPS3A 40S ribosomal protein S3a 1 KT(0.5)S(0.5)YAQHQQVR;KT(0.5)S(0.5)YAQHQQVR 89.866 0.0053767 904820000.0 243730.0 239410.0 211370.0 176619.0 208168.0 225464.0 200820.0 177054.0 231510.0 205420.0 True False 230209.8110362906 227908.38423826385 224995.24840395772 193404.8166575615 224549.63728609984 224056.7955443758 221120.84541432906 176439.84099871406 189473.61989217348 203600.13861434185 1.1306957480630828 1.1193920877920742 1.1050839647518236 0.9499247789015887 1.1028953065274696 1.1004746709371491 1.0860544934754433 0.8665998078366997 0.9306163599970492 1.0 17.6353790180614 -7.248778327860833 24.44332053224262 0.9239560661364183 1.083128239344892 0.605922683369486 0.05623160420449843 361.5635166980271 698033.4137039158 0.027468479494005167 0.015713179350859356 5.6392542060790205e-08 7.248778327860833 0.15917217320847366 KT(ph)TPILR ddPTM_KYSE-520_SHP099_60min_R1 2 KTTPILR 7 1 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 KT(0.76)T(0.24)PILR;KT(0.5)T(0.5)PILR 70.55199999999999 0.032501 5104400000.0 10603500.0 9835000.0 8164800.0 7802400.0 7998600.0 9730200.0 8365200.0 9571100.0 10360400.0 9354100.0 True False 10015302.71744681 9362511.837364042 8691116.072141893 8543937.7501229 8628044.314191416 9669470.212565571 9210836.05248455 9537900.088011524 8479212.524430357 9271229.951379675 1.08025610085924 1.009845714804084 0.9374285955283146 0.9215538601597789 0.9306256407659756 1.0429544152474217 0.9934858805992469 1.0287631887063877 0.9145725614505488 1.0 23.144329313466134 -6.256773966890584 24.91054050593773 0.9975985741131723 0.9726643323435157 0.031709647937363084 0.053407789444242945 1494.4238970242093 7979346.030152413 0.0190074845553327 0.0184199076706929 5.53638181031186e-07 6.256773966890584 -0.02493424176965664 KT(ph)TPKEPTEK ddPTM_KYSE-520_SHP099_60min_R1 1 KTTPKEPTEK 10 2 P26358;P26358-2 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 KT(0.961)T(0.039)PKEPTEK 95.18299999999999 0.0022689 2834600000.0 9020800.0 8569000.0 7644900.0 6948400.0 7279600.0 7651300.0 6716000.0 7799100.0 8955700.0 8186000.0 True False 8520398.241481027 8157332.377668769 8137702.486272476 7608773.84688736 7852463.104741811 7603545.398594372 7394918.821843608 7772046.74242362 7329570.634824996 8113478.408611634 1.0501535608250943 1.0054050762014217 1.002985658732404 0.9377943051911519 0.9678294202899731 0.9371498900550448 0.9114363099795338 0.957917966993587 0.9033820348921371 1.0 22.951889128277436 -4.759698265698859 0.9277584160536065 0.9388432610578084 1.064427217498417 0.6170991984894608 0.027488151294887016 0.6666851210347952 0.7541733008375593 0.009532864328105324 0.07272062767175956 1.7390086182449887e-05 4.759698265698859 0.1255839564406087 KT(ph)TSTEEPR ddPTM_KYSE-520_SHP099_60min_R1 1 KTTSTEEPR 9 1 Q5THJ4-2;Q5THJ4;H3BLS7;A0A2R8YD87 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 KT(0.274)T(0.274)S(0.177)T(0.274)EEPR 62.408 0.029519999999999998 0.0 203820.0 184740.0 201280.0 156790.0 209110.0 241500.0 198920.0 206840.0 232090.0 190850.0 True False 192513.69829490327 175864.81309960684 214254.83085938654 171691.2744593677 225565.7673268533 239992.7089201236 219028.77487211573 206122.52031681887 189948.30651278349 189159.21747905313 1.017733636565829 0.9297184427139086 1.1326692598689376 0.9076548145393984 1.192465111312018 1.268733885234536 1.1579069621408762 1.0896773790029248 1.0041715600447425 1.0 17.529241553162546 -5.770809102341496 24.9999636059129 1.132759145216276 1.0018368615252036 0.27616126737919267 0.0949438435364528 254.11662883972116 678023.0143913412 0.03014253273631574 0.034637885431792685 1.695082724062937e-06 5.770809102341496 -0.1309222836910724 KTAATAAAAAAEPPAPPPPPPPEEDPEQDS(ph)GPEDLPLVR ddPTM_KYSE-520_SHP099_60min_R1 5 KTAATAAAAAAEPPAPPPPPPPEEDPEQDSGPEDLPLVR 39 1 A0A3B3IS71;P06400;Q92728;A0A2R8YFL6 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 KTAATAAAAAAEPPAPPPPPPPEEDPEQDS(1)GPEDLPLVR;KTAATAAAAAAEPPAPPPPPPPEEDPEQDS(1)GPEDLPLVR;KTAATAAAAAAEPPAPPPPPPPEEDPEQDS(1)GPEDLPLVR;KTAATAAAAAAEPPAPPPPPPPEEDPEQDS(1)GPEDLPLVR;KTAATAAAAAAEPPAPPPPPPPEEDPEQDS(1)GPEDLPLVR 157.4 3.3893e-08 4812490000.0 2314280.0 2834270.0 2190310.0 1807000.0 1997980.0 2574190.0 1786300.0 2251290.0 2979390.0 2699770.0 True False 2185902.2749971966 2698107.414873995 2331500.8872199124 1978736.7367056417 2155209.659048858 2558123.525362703 1966876.6366079876 2243480.8004450374 2438407.8803098905 2675852.138189278 0.816899500462075 1.0083170801432162 0.871311554904381 0.739479102176637 0.8054292792528015 0.9560033190375605 0.7350468318249277 0.8384173282321863 0.9112640588429286 1.0 21.351566967293554 -8.033863751936796 3.3993683335728315 0.9996365508942101 0.847974207567586 0.25972990492457904 0.0808653536384944 0.3491056239280936 10.5688572628139 0.08040166931539124 0.021318133982098707 9.249883183109218e-09 8.033863751936796 -0.1516623433266241 KTAESVTSLPSQNNGT(ph)TSPDPFESQPLTVASSKPSSAR ddPTM_KYSE-520_SHP099_60min_R1 1 KTAESVTSLPSQNNGTTSPDPFESQPLTVASSKPSSAR 38 2 O95208-5;O95208-3;O95208-2;O95208;I3L356;I3L2H1;I3L2B2 O95208-5 EPN2 Epsin-2 1 KTAESVTSLPS(0.006)QNNGT(0.331)T(0.331)S(0.331)PDPFES(0.001)QPLTVASSKPSSAR 66.884 0.011068000000000001 175910000.0 159460.0 169470.0 171180.0 148720.0 143340.0 153140.0 132250.0 162760.0 232740.0 167280.0 True False 150614.4359243707 161328.40682034392 182214.5366976841 162854.3040857015 154620.04250696354 152184.19645560122 145619.12063561907 162195.42354846973 190480.28289795024 165798.02934187057 0.9084211466338253 0.9730417632871232 1.0990150933697962 0.9822451131183279 0.9325807014759002 0.9178890548922145 0.8782922282831046 0.9782711181326988 1.1488694024534247 1.0 17.339067333649204 -7.610898291923975 8.072555983509515 1.073118586609931 0.9584702931704618 0.3370272452543702 0.0654824226931754 0.3059509745018927 24.488900312740164 0.04751028748236918 0.01775962366155206 2.4496368588036783e-08 7.610898291923975 -0.11464829343946925 KTAPT(ph)LSPEHWK ddPTM_KYSE-520_SHP099_60min_R1 1 KTAPTLSPEHWK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KTAPT(0.534)LS(0.466)PEHWK 129.54 8.553799999999999e-05 532210000.0 634980.0 578540.0 540300.0 555480.0 597760.0 576720.0 531420.0 590430.0 675790.0 545310.0 True False 599756.3935987516 550746.0699937564 575128.6025105662 608272.6521888475 644800.3112108444 573120.4765565788 585141.1197594001 588381.9361373985 553083.571279564 540478.9776447604 1.1096757106304187 1.0189962843582496 1.0641091074749995 1.1254325835937429 1.193016450002707 1.0603936513017767 1.0826343742531181 1.088630567466998 1.0233211543023015 1.0 19.04387897872888 -7.834004554536815 2.9654397769042 1.0001006853714485 1.0931524112558055 0.36481886804730534 0.04340124804359252 0.29132937594992236 4.848021429406119 0.04450500672998083 0.012214795017074587 1.4655324715306175e-08 7.834004554536815 0.09305172588435706 KTAPTLS(ph)PEHWK ddPTM_KYSE-520_SHP099_60min_R1 2 KTAPTLSPEHWK 12 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KTAPT(0.147)LS(0.853)PEHWK;KT(0.001)APT(0.172)LS(0.827)PEHWK 132.15 6.073e-05 1759090000.0 2432500.0 2322910.0 2230300.0 1766060.0 1958790.0 2066450.0 1780830.0 2007930.0 2391200.0 2022240.0 True False 2297564.3759314697 2211313.916841003 2374068.7066061706 1933905.8114146986 2112935.629009456 2053552.5190392924 1960853.6756259296 2000964.959484387 1957018.3572466192 2004324.5268789132 1.1463035776492656 1.1032713950192532 1.184473210185685 0.9648666099127825 1.0541883815090909 1.0245608889679336 0.9783114706874962 0.9983238406009243 0.9763979490357492 1.0 20.934684688343037 -5.26317216039686 24.999969177947268 1.001888831813258 1.1405415970886865 0.8276778791798025 0.030321816274520786 60.73804925944034 876313.4391679121 0.008439389941448315 0.013279626121394742 5.455415579301205e-06 5.26317216039686 0.13865276527542858 KTAS(ph)EPNLK ddPTM_KYSE-520_SHP099_60min_R1 3 KTASEPNLK 9 1 P56524-2;P56524;Q9UQL6-2;Q9UQL6;Q9UQL6-3;Q9UKV0-10;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UKV0-5;Q9UKV0-7 P56524-2;Q9UKV0-10 HDAC4;HDAC5;HDAC9 Histone deacetylase 4;Histone deacetylase 5;Histone deacetylase 9 1 KT(0.002)AS(0.998)EPNLK;KT(0.204)AS(0.796)EPNLK;KT(0.021)AS(0.979)EPNLK 67.887 0.016966 4290200000.0 3664440.0 3335590.0 3263990.0 2782100.0 3334810.0 3188310.0 3177690.0 3174440.0 4054730.0 3345580.0 True False 3461166.2083199644 3175343.249577339 3474392.017968646 3046509.947531132 3597240.5745266313 3168410.574646457 3498921.9164657854 3163428.6085598627 3318493.2434253045 3315940.764021854 1.04379615156996 0.9575995096263461 1.0477847058264722 0.9187467944499909 1.084832580110265 0.955508798294557 1.0551822741917731 0.9540063691376044 1.0007697602536043 1.0 21.660986804078455 -3.6859883561303253 6.522216432977588 0.9982019624291874 6.138492235558708 0.07233829290078486 0.049958969560590615 22618.506597619496 4847.17961238733 0.011156773134388218 1712729.0720743379 0.0002060685161560753 3.6859883561303253 5.140290273129521 KTAS(ph)FGNILDVPEIVISGNGQPR ddPTM_KYSE-520_SHP099_60min_R1 1 KTASFGNILDVPEIVISGNGQPR 23 1 O43318-3;O43318 O43318-3 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 KT(0.186)AS(0.814)FGNILDVPEIVISGNGQPR 73.722 0.0043798000000000005 13965000.0 51460.0 51690.0 44404.0 39904.0 36143.0 48119.0 31704.0 33435.0 56823.0 43190.0 True False 48605.41121703326 49206.73481172818 47266.35288891203 43696.46416242494 38987.24847446061 47818.67147216326 34908.949721222445 33319.021788787664 46505.37559126156 42807.370201311554 1.1354449242841846 1.1494921220416516 1.1041639013709807 1.020769646837267 0.910760186648095 1.1170663193577393 0.815489238349729 0.7783477852551386 1.0863871191469898 1.0 15.385571588266648 -5.378804727675604 1.0561158718751655 0.9301484352283101 1.1601399530261745 0.378707272798932 0.10059911310114815 0.5857794377047804 1.2768992889464739 0.04014175371266793 0.09857961195079352 4.18018278434383e-06 5.378804727675604 0.2299915177978643 KTDFSWEEER ddPTM_KYSE-520_SHP099_60min_R1 1 KTDFSWEEER 10 1 D6RJC7;D6RH20;G5EA06;Q92552;Q92552-2 D6RJC7 MRPS27 28S ribosomal protein S27, mitochondrial 0 122.55 0.00118 415740000.0 329780.0 361170.0 176270.0 208730.0 317120.0 303240.0 233790.0 248080.0 229970.0 241410.0 False True 311486.4459998685 343818.8510727777 187632.6462419719 228567.6364430373 342075.5398340187 301347.36667883303 257423.7747705209 247219.46838230736 188213.2450719326 239271.2952141378 1.3018128468820347 1.4369414883848655 0.7841836860290682 0.9552655960610689 1.429655569540322 1.2594380216362342 1.075865680169188 1.0332182477679 0.7866102154188183 1.0 17.868287805136138 -7.304105309293311 2.2321704119651677 0.9022276865586892 1.1834883578779385 0.2543668055977478 0.19726743126770852 0.5050710579285055 4.747460322852888 0.15081801506332934 0.060827634554779006 4.964719205502756e-08 7.304105309293311 0.28126067131924926 KTDSEEQDKS(ph)RDEDNDEDEER ddPTM_KYSE-520_SHP099_60min_R1 2 KTDSEEQDKSRDEDNDEDEER 21 3 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 1 KTDSEEQDKS(1)RDEDNDEDEER;KT(0.001)DS(0.121)EEQDKS(0.879)RDEDNDEDEER 214.11 7.685600000000001e-19 1109500000.0 629430.0 520660.0 531180.0 544270.0 543830.0 578230.0 683890.0 590690.0 618570.0 545130.0 True False 594514.2631624023 495646.71207340684 565420.71271805 595997.2571592582 586626.3270305708 574621.0520864722 753024.2753232028 588641.0342580822 506253.28088074614 540300.5723047225 1.1003398730940155 0.9173536684574684 1.0464928998801062 1.1030846304991946 1.0857407100796503 1.0635210872262288 1.3937136363026226 1.0894695738469369 0.9369845357025198 1.0 19.043402684554568 -5.144257770284504 3.5497763985223934 1.1107104852962655 1.0040379708316831 0.06989991226430181 0.11959794508393681 0.5453748574602878 12.525590293014798 0.03441348790746397 0.06435841170291923 7.173683794828116e-06 5.144257770284504 -0.10667251446458237 KTDVEERPR ddPTM_KYSE-520_SHP099_60min_R1 2 KTDVEERPR 9 2 A0A0C4DGA6;Q14527-2;Q14527 A0A0C4DGA6 HLTF Helicase-like transcription factor 0 ; 101.95 0.0014552 1177390000.0 1863730.0 1714340.0 1276630.0 1190740.0 2056300.0 1696510.0 1469660.0 1745530.0 1567460.0 1456800.0 False True 1760345.1816463554 1631980.5331231982 1358923.612480221 1303907.5715909651 2218119.111253446 1685921.4518015673 1618227.5752993873 1739475.1638397644 1282848.7764510638 1443893.8853732513 1.2191652028440445 1.130263483802569 0.9411519961724437 0.9030494448377699 1.5362064579143604 1.1676214359518193 1.1207385748302896 1.2047112197515155 0.8884647199121861 1.0 20.461533288923828 -7.761442506295601 24.99999999999962 0.9442323094290127 1.1489251681393637 0.20513820951198036 0.16412480240305163 0.16280651221743817 1128239.4872796866 0.1353713151944574 0.04355926946078371 1.732038309987015e-08 7.761442506295601 0.20469285871035103 KTEFLDLDNSPLSPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 KTEFLDLDNSPLSPPSPR 18 1 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 KTEFLDLDNSPLS(0.004)PPS(0.996)PR;KTEFLDLDNSPLS(0.003)PPS(0.997)PR;KTEFLDLDNSPLS(0.005)PPS(0.995)PR;KTEFLDLDNSPLSPPS(1)PR;KTEFLDLDNSPLS(0.006)PPS(0.994)PR;KTEFLDLDNSPLS(0.001)PPS(0.999)PR;KTEFLDLDNSPLS(0.001)PPS(0.999)PR;KTEFLDLDNSPLS(0.012)PPS(0.988)PR 210.22 2.6572e-18 6912470000.0 5858870.0 5148190.0 5104580.0 5170430.0 5331850.0 5369700.0 5525880.0 5680830.0 6264830.0 5347850.0 True False 5533866.80173222 4900863.224809271 5433629.394416776 5661826.112653542 5751436.260923347 5336185.710510922 6084489.877791722 5661124.526645689 5127294.795512441 5300472.209564339 1.0440327923513562 0.9246087954137368 1.025121758890116 1.0681739076826333 1.0850799765623287 1.006737796093363 1.14791468330174 1.068041544757197 0.9673279271723353 1.0 22.337689461839627 -4.99357232158207 24.779077013456497 1.055034509960171 0.9819568914583918 0.17401635428522333 0.05483367533083588 209.21386519267654 806511.2969276939 0.013969422116533039 0.0289510997026126 1.014910342934175e-05 4.99357232158207 -0.07307761850177918 KTEMDKS(ph)PFNSPSPQDSPR ddPTM_KYSE-520_SHP099_60min_R1 1 KTEMDKSPFNSPSPQDSPR 19 2 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 KT(0.001)EMDKS(0.991)PFNS(0.006)PS(0.002)PQDSPR 58.373000000000005 0.02525 269810000.0 167420.0 169510.0 140110.0 143400.0 138280.0 148500.0 111660.0 138510.0 171630.0 122100.0 True False 158132.8788565043 161366.48516030266 149141.71478392635 157028.69288521784 149161.84929442508 147573.1564167218 122947.68249658395 138029.54113847687 140466.31844021296 121018.28899236249 1.3066857924795494 1.3334057728289859 1.2323898811140748 1.297561667684196 1.2325562568798072 1.2194285479117557 1.015942991099 1.140567614099948 1.1607032260146881 1.0 16.88486556693439 -6.514360253142539 2.837355237907255 1.091371738430836 1.2818920600583323 0.7367784103484867 0.05614759208751792 0.14711779013763432 2.399216915379844 0.022804098842811815 0.01811908150254505 3.0594245468038843e-07 6.514360253142539 0.19052032162749644 KTEPATGFIDGDLIESFLDISRPK ddPTM_KYSE-520_SHP099_60min_R1 4 KTEPATGFIDGDLIESFLDISRPK 24 2 Q16531;Q16531-2 Q16531 DDB1 DNA damage-binding protein 1 0 ;;; 222.72 1.9786e-21 310116700.0 384894.0 263959.0 210586.0 339654.0 348290.0 258828.0 226909.0 243129.0 248187.0 156195.3 False True 363543.1625528331 251278.01342946358 224160.7105095134 371934.6140393011 375698.4415009787 257212.55844462846 249847.17613843232 242285.6422457352 203122.4970851318 154811.5311601047 2.3482951161878245 1.6231220733137386 1.4479587459004484 2.402499421407115 2.4268117412548214 1.6614560718905462 1.6138796268350488 1.5650361470500898 1.3120630973868757 1.0 17.240153409277777 -7.4755662409855566 0.8960916887204783 1.0402619516592138 1.991811718752417 0.5236624944987694 0.3209860484974491 0.5116305503513924 0.7757896967521171 0.3229317889280528 0.12623921214503803 3.345289897584598e-08 7.4755662409855566 0.9515497670932032 KTES(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 5 KTESPIK 7 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 KT(0.356)ES(0.644)PIK;KTES(1)PIK;KT(0.004)ES(0.996)PIK;KTES(1)PIK;KTES(1)PIK 93.096 0.0044224 13009610000.0 32168200.0 22479700.0 19688100.0 28364200.0 30509000.0 31905500.0 35055300.0 24360700.0 28099400.0 37045100.0 True False 30383765.820283137 21399741.469282404 20957226.428073805 31059925.039992303 32909884.727535553 31706365.939755723 38599031.830758564 24276198.41753015 22997257.28823003 36716909.23465169 0.8275142557916713 0.5828306879677752 0.5707786103165612 0.8459297279488712 0.8963141346460816 0.8635358095401109 1.0512603766313373 0.6611721662731735 0.6263396829307817 1.0 25.129941284523387 -5.278468699206944 23.071171993832326 0.8460807956544594 0.6526201507405608 0.2786290636377122 0.13901503337673768 385.64474953136596 522467.27580360905 0.04080926655818504 0.06076203952664848 5.266611714394733e-06 5.278468699206944 -0.19346064491389858 KTES(ph)PIKLS(ph)PATPSR ddPTM_KYSE-520_SHP099_60min_R1 4 KTESPIKLSPATPSR 15 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 2 KT(0.186)ES(0.814)PIKLS(1)PATPSR;KT(0.346)ES(0.654)PIKLS(0.994)PAT(0.006)PSR;KT(0.002)ES(0.998)PIKLS(1)PATPSR;KT(0.287)ES(0.713)PIKLS(0.996)PAT(0.003)PS(0.001)R 153.82 1.8035e-06 5612980000.0 6568880.0 6169760.0 5725350.0 6272810.0 6477540.0 6021490.0 5794180.0 6201820.0 7417250.0 6269790.0 True False 6204491.131662364 5873355.468601437 6094415.221883895 6868975.9764109105 6987285.545838953 5983907.647351701 6379912.260147383 6180307.333935665 6070464.373656518 6214244.5384228015 0.998430475868767 0.9451439241385433 0.9807169937072802 1.1053597800890986 1.1243982277550268 0.9629340477918236 1.0266593502557317 0.9945388044713558 0.9768628086845814 1.0 22.567147583784948 -5.025775806413056 24.87511194645288 1.029494859337522 0.9695729930138729 0.18517534158245086 0.05048965860544261 1094.250933575549 1056014.5706235731 0.014764574639846591 0.025706645527733545 9.423759488247798e-06 5.025775806413056 -0.05992186632364904 KTES(ph)PIKLSPATPSR ddPTM_KYSE-520_SHP099_60min_R1 1 KTESPIKLSPATPSR 15 2 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 KT(0.004)ES(0.995)PIKLS(0.001)PATPSR 109.22 0.00018282 931850000.0 834340.0 812440.0 754130.0 522460.0 624580.0 706600.0 713030.0 621560.0 1041000.0 653490.0 True False 788057.4969844443 773409.1629026991 802742.4264506615 572114.4413166739 673730.8926259192 702189.8473000377 785110.0309021971 619403.9534331938 851980.6414744614 647700.5870075264 1.2167002976257715 1.1940843939573453 1.239372701759391 0.8833007917438027 1.0401887942369432 1.084127236234662 1.2121496361915045 0.9563121693233794 1.3153927270789416 1.0 19.304967526025663 KTET(ph)QEKNTLPTK ddPTM_KYSE-520_SHP099_60min_R1 1 KTETQEKNTLPTK 13 2 P63313;CON__P21752 P63313 TMSB10 Thymosin beta-10 1 KT(0.429)ET(0.571)QEKNTLPTK 72.184 0.018269 0.0 129670.0 140040.0 123030.0 82416.0 80780.0 83178.0 83769.0 108040.0 163640.0 101020.0 True False 122476.94660926366 133312.26819567455 130960.71065496003 90248.79186072598 87136.92642467211 82658.85524868753 92237.18802665542 107665.23445672564 133927.10102870388 100125.04139237065 1.2232399098772926 1.3314578085740767 1.3079716006483368 0.9013608444570668 0.870281052700886 0.8255562654377687 0.9212199739842877 1.0753077647659233 1.3375984585501393 1.0 16.611443313490827 -5.254480712945661 24.698501200170266 0.9785974211798772 1.2919466063978622 0.4933962816685852 0.1377109143443495 408.5413461641856 1450036.8757695146 0.04115744157044168 0.06929690302117145 5.565693510009412e-06 5.254480712945661 0.31334918521798494 KTETQEKNPLPSK ddPTM_KYSE-520_SHP099_60min_R1 1 KTETQEKNPLPSK 13 2 P62328 P62328 TMSB4X Thymosin beta-4;Hematopoietic system regulatory peptide 0 51.771 0.051024 532300000.0 669400.0 715490.0 781120.0 345240.0 541520.0 667290.0 332390.0 477150.0 526330.0 666190.0 False True 632267.0475841839 681116.7864276144 831472.2450361896 378051.5057998089 584134.543172673 663125.1955913432 365991.2250137876 475494.8780176469 430761.73969957087 660288.0748879779 0.9575624210560701 1.0315448852278155 1.2592567951151536 0.5725554044936337 0.8846662015996202 1.0042967922809247 0.5542902241205558 0.720132463543761 0.6523845516559607 1.0 19.332736064874286 -5.260384099267526 24.998838935628346 0.7636817761869809 1.0776637147616626 0.42977884434322045 0.165095193490916 91.03177282091765 2156453.994360996 0.04595881322124103 0.07416225395163692 5.490550630946882e-06 5.260384099267526 0.3139819385746817 KTEVQAHS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 KTEVQAHSPSR 11 1 A0A669KB77;P11137-3;P11137 A0A669KB77 MAP2 Microtubule-associated protein 2 1 KTEVQAHS(0.5)PS(0.5)R 71.08 0.014941 451280000.0 276420.0 264360.0 215080.0 206080.0 218220.0 193320.0 180180.0 188920.0 269930.0 181940.0 True False 261086.4315703916 251659.74878755 228944.40094016757 225665.78123978872 235392.67249804395 192113.41817158693 198394.3527873407 188264.68061425947 220917.51638155736 180328.153147178 1.4478406561248442 1.3955654976522354 1.26959876727241 1.2514173594159066 1.3053573077184686 1.0653545484647102 1.1001851309674182 1.0440115829312793 1.2250861139871578 1.0 17.460265124868197 -2.513143762773104 0.23673319936819961 1.0140269977277199 2.4520518705598615 0.7764657318237804 0.06855067261489681 11.316296950884071 0.27814013533376125 0.10062199903665062 5.495132035660215 0.0030680062303927737 2.513143762773104 1.4380248728321416 KTEVQAHS(ph)PSRK ddPTM_KYSE-520_SHP099_60min_R1 2 KTEVQAHSPSRK 12 2 A0A669KB77;P11137-3;P11137 A0A669KB77 MAP2 Microtubule-associated protein 2 1 KTEVQAHS(0.5)PS(0.5)RK;KTEVQAHS(0.873)PS(0.127)RK 125.28 6.0568999999999996e-05 1354740000.0 668420.0 595580.0 491770.0 615500.0 581280.0 454410.0 459620.0 485180.0 641380.0 422640.0 True False 631341.4101377643 566967.4428161948 523470.28105982003 673996.9349431773 627023.4289692183 451573.8586351689 506082.87505892845 483497.0238218628 524921.5598740535 418895.7384089447 1.507156440730893 1.353481047502794 1.249643367220855 1.6089849409859391 1.4968484314277986 1.0780101520018863 1.208135649651484 1.1542180535383042 1.2531079019037468 1.0 18.67623168161199 -6.259662909850395 24.994194081272852 1.1526730568069454 1.4366917855953387 0.6536262946953989 0.11055742263845485 112.62611145465452 1584609.8202808795 0.03855620869923012 0.03667853798197492 5.499675813873164e-07 6.259662909850395 0.2840187287883933 KTEVQAHSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 KTEVQAHSPSR 11 1 A0A669KB77;P11137-3;P11137 A0A669KB77 MAP2 Microtubule-associated protein 2 1 KTEVQAHS(0.331)PS(0.669)R 87.932 0.0021 0.0 213140.0 185830.0 147200.0 199870.0 198190.0 148550.0 135770.0 151160.0 197350.0 150220.0 True False 201316.6993159438 176902.44786348336 156688.74752832754 218865.58470689313 213786.425453154 147622.84434817545 149494.9565875084 150635.66124100907 161516.21478865005 148889.1676693916 1.3521245532312165 1.1881485445354576 1.052385139772256 1.4699899806874075 1.4358762883802718 0.9914948592900457 1.004068723921286 1.0117301587412695 1.08480836663213 1.0 17.183879269873753 -6.278247114631755 24.560033903975913 1.018256549222424 1.289227622296622 0.602439901343415 0.11409240770984966 523.5936489947978 765090.2177248836 0.04374951078717563 0.038690681192537074 5.26929951663606e-07 6.278247114631755 0.2709710730741979 KTFEINPR ddPTM_KYSE-520_SHP099_60min_R1 2 KTFEINPR 8 1 P14625;Q58FF3;H0YIV0 P14625 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein 0 ; 118.18 0.0023884 1059620000.0 2189260.0 2023400.0 1379480.0 1578090.0 2256740.0 2029750.0 1552290.0 1830340.0 1985540.0 1774580.0 False True 2067817.3836183879 1926192.826814683 1468403.4880460394 1728071.1991299412 2434332.5989058516 2017081.5773524686 1709210.6220904747 1823990.977744566 1625015.9873902034 1758858.6018023489 1.1756586808623732 1.0951379632455174 0.8348615895225049 0.9824958057226095 1.3840411027988986 1.1468128110386542 0.9717726145461616 1.0370310472231676 0.9239037098974339 1.0 20.746208075625756 -6.772545812939793 24.93631538744313 0.9862627346150148 1.0978891064015464 0.1604779339621798 0.13405074294641658 499.0452053238861 1120451.6070170624 0.06172836704765478 0.04205891083889033 1.6883177525051994e-07 6.772545812939793 0.11162637178653156 KTGQIWPNDGEGAFHGDADGSFGT(ph)PPGYGCAADR ddPTM_KYSE-520_SHP099_60min_R1 5 KTGQIWPNDGEGAFHGDADGSFGTPPGYGCAADR 34 1 P11274;P11274-2 P11274 BCR Breakpoint cluster region protein 1 KTGQIWPNDGEGAFHGDADGS(0.007)FGT(0.993)PPGYGCAADR;KTGQIWPNDGEGAFHGDADGS(0.011)FGT(0.989)PPGYGCAADR;KTGQIWPNDGEGAFHGDADGS(0.001)FGT(0.999)PPGYGCAADR;KTGQIWPNDGEGAFHGDADGS(0.306)FGT(0.694)PPGYGCAADR;KTGQIWPNDGEGAFHGDADGS(0.002)FGT(0.998)PPGYGCAADR 219.67 1.1352e-22 18763980000.0 5028490.0 5065440.0 5093740.0 5349240.0 5207600.0 4823260.0 4069050.0 4041340.0 5615080.0 4135700.0 True False 4749549.635653703 4822088.659019551 5422090.630672161 5857630.161292345 5617408.492809153 4793156.245242545 4480389.284101065 4027321.534795844 4595523.016647849 4099060.9155259114 1.1586921330356306 1.1763886310532847 1.3227641019276006 1.429017592567494 1.3704135187482172 1.1693303280972542 1.0930282268142943 0.9824985814535369 1.1211160583736388 1.0 21.96686199912954 -6.614148358487048 2.696928375533218 1.0433148207583185 1.2934670826613959 0.6446127347703495 0.0846468860782256 0.19451048386210218 2.867583047854989 0.04056088164932599 0.03008046447860784 2.431373290525848e-07 6.614148358487048 0.2501522619030774 KTGS(ph)PEIK ddPTM_KYSE-520_SHP099_60min_R1 5 KTGSPEIK 8 1 E9PKA2;Q9BZ95-3;Q9BZ95-4;Q9BZ95-2;Q9BZ95-5;Q9BZ95 E9PKA2 WHSC1L1 Histone-lysine N-methyltransferase NSD3 1 KTGS(1)PEIK;KT(0.01)GS(0.99)PEIK;KT(0.202)GS(0.798)PEIK;KT(0.011)GS(0.989)PEIK;KT(0.003)GS(0.997)PEIK 128.36 0.00054289 11266940000.0 28877400.0 25847300.0 24484100.0 25337200.0 24528300.0 24482000.0 24517900.0 25140900.0 29815000.0 26365100.0 True False 27275513.056330293 24605556.91041176 26062384.261945125 27745239.870093048 26458537.663063686 24329198.756863225 26996408.603644952 25053692.08583014 24401347.574986618 26131525.7257374 1.0437780534745493 0.9416042969958434 0.9973540977087236 1.0617535371371856 1.0125140774694301 0.9310286361466055 1.0330972973788406 0.958753512855712 0.933789623732276 1.0 24.639288025099667 KTGS(ph)PGS(ph)PGAGGVQSTAK ddPTM_KYSE-520_SHP099_60min_R1 6 KTGSPGSPGAGGVQSTAK 18 1 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 2 KT(0.431)GS(0.569)PGS(1)PGAGGVQSTAK;KT(0.22)GS(0.781)PGS(0.999)PGAGGVQSTAK;KT(0.043)GS(0.957)PGS(1)PGAGGVQSTAK;KT(0.007)GS(0.992)PGS(0.967)PGAGGVQS(0.033)TAK;KT(0.001)GS(0.999)PGS(1)PGAGGVQSTAK;KT(0.006)GS(0.994)PGS(1)PGAGGVQSTAK 287.22 8.987000000000001e-38 3757110000.0 7164840.0 6904870.0 6424210.0 5898890.0 6205630.0 5933560.0 5551990.0 5794190.0 7863550.0 5835050.0 True False 6767392.042445564 6573149.6807788275 6838324.855699428 6459518.732034049 6693977.775795235 5896526.451097668 6113239.331400756 5774091.30726411 6435727.543963966 5783355.996600208 1.1701496581610797 1.136563214272631 1.182414649853717 1.1169152886025568 1.1574555983982906 1.019568301616568 1.0570401225507253 0.9983980427036578 1.112801554624557 1.0 22.463475479801467 -6.257366209007449 24.920298514794517 1.0386788875809092 1.1514660256424774 0.7328926481470659 0.03474728946297759 167.03528031345945 1021948.1961484923 0.010877660820034853 0.010508942183945196 5.528837059106976e-07 6.257366209007449 0.11278713806156815 KTGS(ph)YGALAEITASK ddPTM_KYSE-520_SHP099_60min_R1 4 KTGSYGALAEITASK 15 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YHI8;H0YIS4;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 KT(0.374)GS(0.613)Y(0.013)GALAEITASK;KT(0.025)GS(0.974)YGALAEIT(0.001)ASK;KT(0.001)GS(0.999)YGALAEITASK;KT(0.033)GS(0.967)YGALAEITASK 168.09 4.3769e-06 4153310000.0 6238180.0 5839040.0 5795990.0 4969950.0 4994420.0 5308242.0 5057587.0 5761950.0 7372720.0 5255330.0 True False 5892135.719896481 5558523.7538222745 6169608.789311887 5442292.55373005 5387452.439637431 5275111.292685611 5568857.251252466 5741963.140299239 6034019.899146569 5208771.864784868 1.1311948138354178 1.067146709073973 1.1844651579046845 1.0448321974943755 1.0343037820605228 1.012736097802487 1.0691305735430725 1.1023641060417977 1.1584342827415777 1.0 22.312511820244413 -5.296787729706142 24.991283973066697 1.0618307322481422 1.121556729544672 0.27068462587182396 0.05031829883787455 896.201286956559 633612.5662605641 0.014751452443001528 0.021881198260636392 5.049080213657671e-06 5.296787729706142 0.05972599729652983 KTGSPGS(ph)PGAGGVQSTAK ddPTM_KYSE-520_SHP099_60min_R1 2 KTGSPGSPGAGGVQSTAK 18 1 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 KT(0.156)GS(0.156)PGS(0.688)PGAGGVQSTAK;KT(0.228)GS(0.228)PGS(0.543)PGAGGVQSTAK 238.07 9.911e-24 4069600000.0 2566500.0 2400200.0 2073140.0 1390070.0 1674690.0 2020290.0 1584710.0 1941660.0 2634500.0 2136960.0 True False 2424131.128809095 2284890.789226352 2206777.92154128 1522181.8348602145 1806478.5753173323 2007680.6207214738 1744907.9520791827 1934924.8346468525 2156141.2103405064 2118028.19692972 1.1445225952719136 1.0787820447992686 1.0419020505676984 0.718678739530833 0.8529058196373361 0.9479007992583831 0.8238360351427756 0.9135500827853504 1.0179945731912514 1.0 21.01429036512274 -5.034140081565068 12.485693758745779 0.8893400298699087 1.0988724143292368 0.5330995886761158 0.08369244196949555 1.2119415396653308 443.2391415043298 0.022963589342033117 0.04018560970314479 9.243999608947233e-06 5.034140081565068 0.2095323844593281 KTKPPRPDS(ph)PATTPNISVK ddPTM_KYSE-520_SHP099_60min_R1 1 KTKPPRPDSPATTPNISVK 19 3 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 KTKPPRPDS(1)PATTPNISVK 181.69 1.1274e-09 2055000000.0 1538900.0 1221400.0 1436500.0 1126700.0 1045900.0 1171200.0 1063900.0 1160300.0 1676500.0 1062600.0 True False 1453534.1492789062 1162722.1106412243 1529099.088481264 1233781.2292452916 1128206.3796430388 1163890.106365418 1171449.3946634023 1156275.1901160548 1372089.8611257756 1053186.1906902906 1.380130277179399 1.1040043260338805 1.4518791662840218 1.1714749397128283 1.071231648891615 1.1051133376545401 1.1122908798259104 1.0978829767585507 1.3027989478540976 1.0 20.00632907942006 -5.50722641811698 23.857483422436598 1.1193612143222527 1.2946166739320366 0.39150057079372125 0.10922655261546982 412.9241949593993 629384.3200331883 0.029490125754439735 0.04221546762276982 3.110094476001048e-06 5.50722641811698 0.17525545960978395 KTLDMIK ddPTM_KYSE-520_SHP099_60min_R1 2 KTLDMIK 7 1 P14625 P14625 HSP90B1 Endoplasmin 0 ; 112.84 0.0070309 947240000.0 2177640.0 1964250.0 1248780.0 1390350.0 2319990.0 2084770.0 1592140.0 1930000.0 1903360.0 1846910.0 False True 2056841.9681822862 1869884.4816006415 1329278.3569186453 1522488.4459760298 2502560.0140625797 2071758.1771238327 1753089.0489889951 1923305.280465387 1557757.8038009906 1830547.8142742359 1.1236210013983001 1.021489013845837 0.7261642370405218 0.8317119247604339 1.3671098862035347 1.1317694959774818 0.9576854727960488 1.050671971236068 0.8509790302410651 1.0 20.80384402694118 -4.297308480427907 5.251990319735953 0.9955573023176648 1.1262800829885402 0.052530077014723675 0.16785512806147454 0.5693308337723453 42.390324532323056 0.0452741652628966 0.22466122802479271 5.0430296269326106e-05 4.297308480427907 0.1307227806708754 KTLEEEAK ddPTM_KYSE-520_SHP099_60min_R1 3 KTLEEEAK 8 1 P35579 P35579 MYH9 Myosin-9 0 ;; 132.91 0.0018794 1181900000.0 1740290.0 1653720.0 1284140.0 1113770.0 1775980.0 1705350.0 1330860.0 1670200.0 1749650.0 1588830.0 False True 1643752.6445178941 1574272.8089156742 1366917.7190966443 1219622.36593284 1915739.522056071 1694706.2780825365 1465396.3167419294 1664406.4660276123 1431957.6650872158 1574754.202291035 1.043815372663541 0.9996943057051948 0.868019731020867 0.7744842745353334 1.2165324082126294 1.0761719356690644 0.9305555842365709 1.0569309569748386 0.909321380443963 1.0 20.58669523043874 -4.513134221416089 24.541119065066948 0.9806146083714513 1.0327851448963015 0.027287545135894042 0.11570047824368879 1702.4178274954397 4287417.5722193085 0.03080715647748142 0.0943058249335283 3.0680736345748465e-05 4.513134221416089 0.05217053652485015 KTLPLTTAPEAGEVTPSDSGGQEDS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 1 KTLPLTTAPEAGEVTPSDSGGQEDSPAK 28 1 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3;H0Y8P9 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KTLPLTTAPEAGEVTPSDSGGQEDS(1)PAK 117.54 0.0002084 764850000.0 335420.0 304510.0 267350.0 172830.0 262670.0 309740.0 264030.0 309900.0 388480.0 331570.0 True False 316813.5839568071 289880.88252117136 284583.8087751241 189255.71123676564 283340.63461213943 307806.79776778066 290720.7290844804 308825.02923120355 317941.8247838603 328632.5477575569 0.9640359304597272 0.8820820837716479 0.8659635532664006 0.5758885190409863 0.8621806833970967 0.9366290705778173 0.8846376631536651 0.9397274595547183 0.9674690682750526 1.0 18.32611584627397 -6.157315452407191 4.669056960360001 0.9378675378195509 0.8180227434743421 0.2623313277021314 0.09728202452102125 0.3553109405185168 12.540498707879497 0.03489363137033364 0.034900896944123114 6.961206989784461e-07 6.157315452407191 -0.11984479434520878 KTMGTERSRGGK ddPTM_KYSE-520_SHP099_60min_R1 1 KTMGTERSRGGK 12 3 A8MZ25 A8MZ25 Putative uncharacterized protein FLJ38767 0 46.891000000000005 0.053465 122180000.0 275000.0 255530.0 203840.0 237500.0 216940.0 209380.0 193210.0 220680.0 274570.0 228930.0 False True 259745.20180109105 243253.95524165017 216979.85255553172 260071.9285930213 234011.9437802474 208073.18175443247 212741.55234788646 219914.51258709934 224715.00934643872 226901.8583048451 1.1447469127913468 1.0720668268606062 0.9562718180298767 1.1461868604161534 1.031335510112261 0.917018411876045 0.9375928162830023 0.969205427536172 0.9903621372925543 1.0 17.791708899031928 -6.041516002230737 6.628484040482834 0.9604548473494933 1.072730745001157 0.5109255388953517 0.0539517356688318 0.18790026874295127 23.046875688910934 0.017957223911355496 0.018316262181905633 9.088328111423229e-07 6.041516002230737 0.11227589765166368 KTPEKLDNT(ph)PASPPRSPAEPNDIPIAK ddPTM_KYSE-520_SHP099_60min_R1 1 KTPEKLDNTPASPPRSPAEPNDIPIAK 27 3 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3;H0Y911;Q4VXL4;O95359-2;H0Y8P9 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KT(0.034)PEKLDNT(0.477)PAS(0.477)PPRS(0.012)PAEPNDIPIAK 102.51 0.0016635 1270600000.0 2021000.0 1714500.0 1669200.0 1030200.0 1091500.0 764630.0 598660.0 499230.0 832980.0 513150.0 True False 1908891.1012363802 1632132.8464830348 1776799.302814428 1128109.8982590765 1177394.8402145286 759857.6605449021 659178.3951585612 497498.2876511582 681731.8297169989 508603.89022465836 3.7531979953853534 3.2090451485970664 3.49348350841278 2.218052043921199 2.3149544524609413 1.4940067804225032 1.2960545678630018 0.9781645347451144 1.3403983784234665 1.0 18.956182971436043 -5.674326004110613 0.7313625319266951 1.0432269481957666 3.792043325088295 0.9483663019896839 0.22749279936282957 0.15116638990402853 0.17028767848647966 0.12491365451736212 0.24903152125543926 2.1167715794670118e-06 5.674326004110613 2.7488163768925284 up KTPEKLDNTPAS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 KTPEKLDNTPASPPR 15 2 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3;H0Y911;Q4VXL4;O95359-2;H0Y8P9 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 1 KTPEKLDNT(0.011)PAS(0.989)PPR 101.17 0.00069408 504700000.0 753580.0 647140.0 635960.0 541190.0 529980.0 412290.0 288220.0 289990.0 322500.0 291410.0 True False 711777.4151755136 616050.423023057 676954.9991719767 592624.5348852931 571686.4108262914 409716.7451787895 317356.0903561291 288984.0923741747 263942.12956341374 288828.33411354903 2.4643614601041453 2.13292932258116 2.343797055955877 2.051822708821603 1.979329391560111 1.4185476173460003 1.0987706290317236 1.000539276249 0.9138373850110162 1.0 18.139852752257447 -6.323690587400428 1.1544067503921769 0.9388330262881842 2.296195001775902 0.975089912856812 0.09189968895980305 0.06225427713421276 0.17106415810218062 0.04599995854156724 0.03916237981019249 4.7457997879947446e-07 6.323690587400428 1.3573619754877178 up KTPEKLDNTPAS(ph)PPRS(ph)PAEPNDIPIAK ddPTM_KYSE-520_SHP099_60min_R1 2 KTPEKLDNTPASPPRSPAEPNDIPIAK 27 3 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3;H0Y911;Q4VXL4;O95359-2;H0Y8P9 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 2 KTPEKLDNT(0.055)PAS(0.945)PPRS(1)PAEPNDIPIAK;KT(0.002)PEKLDNT(0.022)PAS(0.977)PPRS(0.999)PAEPNDIPIAK 176.22 3.7861e-10 4882860000.0 1462910.0 1313040.0 1422880.0 1102320.0 1370760.0 1681860.0 1471900.0 1595660.0 2147100.0 1627060.0 True False 1381759.4660612147 1249959.5874867784 1514601.121488494 1207084.1613754083 1478631.0134424828 1671362.8878857114 1620694.0163596806 1590125.0278898457 1757240.7639863743 1612645.5142335254 0.8568277739066241 0.7750987904374459 0.9392027622439821 0.7485117781443268 0.9168977313314027 1.0364105893911184 1.0049908687650928 0.9860350671335334 1.0896633813672147 1.0 20.620997914784933 -6.055052623275821 4.024633276319975 1.0200748984224703 0.8329938459927503 0.7362448316981279 0.054529136819152633 0.11343180997513018 3.7400229946986876 0.01732414106302919 0.017955975737912022 8.809421231620733e-07 6.055052623275821 -0.18708105242972006 KTPES(ph)FLGPNAALVNLDSLVTR ddPTM_KYSE-520_SHP099_60min_R1 1 KTPESFLGPNAALVNLDSLVTR 22 1 O95208-5;O95208-3;O95208-2;O95208;I3L356;I3L2H1;I3L2B2 O95208-5 EPN2 Epsin-2 1 KT(0.29)PES(0.71)FLGPNAALVNLDSLVTR 101.38 0.00013233 10961000.0 29978.0 34615.0 30688.0 29764.0 33621.0 35568.0 29024.0 32597.0 44102.0 24189.0 True False 28315.060580338577 32952.04344182573 32666.197582536075 32592.7616111271 36266.781422677675 35346.006918720304 31958.029166942964 32483.928615196997 36094.18852094781 23974.70427875723 1.181038992227617 1.374450464901995 1.3625276542609928 1.359464593688686 1.5127102716679526 1.4743041877700491 1.3329895040774018 1.354925100952313 1.5055113131438722 1.0 14.549225399664529 -10.251602412997025 3.999763826269541 0.9996077030379457 1.3866217066546833 0.6088139780112626 0.09237575117534205 32282953.134753246 78.93975537093458 116706.70424240727 0.02276182860442276 5.602702818500791e-11 10.251602412997025 0.38701400361673766 KTPLALAGS(ph)PTPK ddPTM_KYSE-520_SHP099_60min_R1 3 KTPLALAGSPTPK 13 1 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785 M0QXA7 WIZ Protein Wiz 1 KTPLALAGS(0.83)PT(0.17)PK;KTPLALAGS(0.991)PT(0.009)PK;KTPLALAGS(0.777)PT(0.223)PK 171.48 6.2374e-07 3184710000.0 5075800.0 4728500.0 4217800.0 3536520.0 4145100.0 5004200.0 4196500.0 4655000.0 5548600.0 4953700.0 True False 4794235.255643557 4501335.762376801 4489686.136718613 3872629.797506486 4471295.787607191 4972966.93158626 4620723.1738932 4638852.891485168 4541114.108823429 4909814.071920277 0.9764596348082248 0.9168037111874349 0.9144309888220783 0.7887528408976722 0.9106853583680458 1.0128625766151025 0.9411197870647655 0.944812333732806 0.9249055142015499 1.0 22.227236961970576 -6.0200925501959635 24.774527183201513 0.9600322683117077 0.8950009098496511 0.2847893349817203 0.04998874313738646 965.9472005528606 1191032.1081853441 0.0171242035186631 0.017353403460606494 9.547890942946734e-07 6.0200925501959635 -0.06503135846205665 KTPS(ph)KPPAQLS(ph)PSVPK ddPTM_KYSE-520_SHP099_60min_R1 1 KTPSKPPAQLSPSVPK 16 2 P18887;F5H8D7;M0QYS5 P18887 XRCC1 DNA repair protein XRCC1 2 KT(0.405)PS(0.594)KPPAQLS(0.903)PS(0.097)VPK 78.916 0.0077529 554050000.0 508890.0 427770.0 362730.0 406220.0 443590.0 400400.0 423590.0 379180.0 431640.0 416750.0 True False 480660.85725293524 407219.2871041399 386112.1561885204 444827.0266655041 478498.0093181519 397900.95507916174 466410.611040014 377864.7130812772 353265.0567589206 413057.91922659345 1.1636645489158544 0.9858648585327071 0.9347651702489421 1.076911992144818 1.1584283633009336 0.9633054749905013 1.1291651590007468 0.9147983744962166 0.8552433940023991 1.0 18.655984565820766 -7.285400189012593 23.156237350845544 0.9137655512302583 1.0521381673802774 0.36106601855352394 0.081978504880275 347.9846242050607 336295.67572250037 0.044552773976471734 0.021429096208474253 5.183222008340787e-08 7.285400189012593 0.13837261615001917 KTPS(ph)RPGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 KTPSRPGSR 9 2 Q03001;F8W9J4;Q03001-14;F6QMI7;E9PHM6;Q03001-8;A0A0U1RQJ2;H0YC65;A0A494C073;A0A494C1U5 Q03001 DST Dystonin 2 KT(0.032)PS(0.968)RPGS(1)R 70.806 0.02444 0.0 796840.0 772680.0 703340.0 717360.0 756330.0 654470.0 551650.0 615470.0 795310.0 548690.0 True False 752637.6967388418 735559.2929836739 748678.4217837886 785537.6787178509 815848.8680709617 650385.2099666808 607416.1655851733 613335.0782217779 650901.7521335767 543829.0334743599 1.3839601242516721 1.3525561301580518 1.3766797572404468 1.4444570450740508 1.500193659869075 1.1959369028379483 1.1169248572562858 1.1278086318844818 1.1968867273877628 1.0 19.052793649211328 -6.418842935405565 4.595895588767742 1.124801683258093 1.4072035456435048 0.8513310802068716 0.0599798947034977 0.0897293861950743 3.0842661226169996 0.02238725919287091 0.019408438257211936 3.8120366252291176e-07 6.418842935405565 0.2824018623854119 KTPS(ph)RPGSR ddPTM_KYSE-520_SHP099_60min_R1 1 KTPSRPGSR 9 2 Q03001;F8W9J4;Q03001-14;F6QMI7;E9PHM6;Q03001-8;A0A0U1RQJ2;H0YC65;A0A494C073;A0A494C1U5 Q03001 DST Dystonin 1 KT(0.145)PS(0.652)RPGS(0.203)R 48.568000000000005 0.062015999999999995 1421700000.0 496150.0 454290.0 407530.0 402130.0 424730.0 461890.0 366100.0 373250.0 462650.0 358570.0 True False 468627.5704494953 432465.2264968078 433800.03587105445 440348.3142952066 458153.8346168732 459007.173180604 403108.9607916831 371955.28286720446 378644.42245740595 355393.34876323893 1.3186166034910585 1.2168635907277876 1.2206194555431864 1.2390448944179995 1.2891457766760084 1.2915468867887903 1.1342614097717176 1.0466016996705219 1.0654234913936353 1.0 18.439057155814425 -6.9844988695644785 3.043483345991062 1.0435081904900392 1.2586273342636112 0.8935230720519227 0.03505817802974088 0.08399611365216772 1.5908719602379524 0.01828690856812037 0.010744367109150275 1.0363373019347465e-07 6.9844988695644785 0.215119143773572 KTPSKPPAQLS(ph)PSVPK ddPTM_KYSE-520_SHP099_60min_R1 4 KTPSKPPAQLSPSVPK 16 2 P18887;F5H8D7;M0QYS5 P18887 XRCC1 DNA repair protein XRCC1 1 KT(0.007)PS(0.007)KPPAQLS(0.807)PS(0.179)VPK;KT(0.001)PS(0.005)KPPAQLS(0.943)PS(0.051)VPK;KTPSKPPAQLS(0.984)PS(0.016)VPK;KTPSKPPAQLS(0.843)PS(0.157)VPK 183.06 2.5642000000000003e-10 14498600000.0 11299700.0 9248290.0 9493700.0 8552910.0 8995100.0 9598800.0 9184500.0 10186800.0 11183400.0 9472800.0 True False 10672883.11560651 8803988.266433703 10105679.092457071 9365775.994873842 9702963.194882002 9538890.328705935 10112958.892081996 10151464.368417006 9152776.47057202 9388878.361726886 1.13675805611816 0.9377039436704765 1.0763457255610185 0.9975393901206326 1.0334528599747825 1.0159776238651215 1.0771210897040455 1.0812222692966977 0.9748530248173927 1.0 23.16252138656125 KTQMAEVLPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 KTQMAEVLPSPR 12 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR;KTQMAEVLPS(1)PR 127.83 5.3751999999999996e-05 4044870000.0 4640200.0 4914430.0 4695350.0 4205250.0 4568460.0 4127630.0 4228630.0 4101790.0 5487760.0 4587080.0 True False 4382798.85599063 4678333.406090183 4998019.773825621 4604915.695645485 4927971.811018291 4101867.9301033937 4656101.187851778 4087561.847854982 4491321.119171839 4546442.039894243 0.9640063191243455 1.0290097982199304 1.0993255231165078 1.0128614101396534 1.0839183184952519 0.9022149395307829 1.024119772559574 0.8990682850429706 0.9878760313584277 1.0 22.116306530153903 -6.255490995664868 24.991657895206785 0.9601890713851724 1.0393644899000585 0.35485713496929183 0.05060061617162357 522.8907003458957 2196885.168818897 0.016239644648727104 0.015829015190974967 5.552761296778372e-07 6.255490995664868 0.07917541851488608 KTQQLHPVLQKPSVFGNDS(ph)DDDDETSVSESLQR ddPTM_KYSE-520_SHP099_60min_R1 2 KTQQLHPVLQKPSVFGNDSDDDDETSVSESLQR 33 2 Q9H0G5 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 1 KTQQLHPVLQKPS(0.001)VFGNDS(0.997)DDDDET(0.001)S(0.001)VSESLQR;KTQQLHPVLQKPS(0.001)VFGNDS(0.999)DDDDETSVSESLQR 275.59 3.7239e-42 3102100000.0 683910.0 703350.0 711680.0 751840.0 653680.0 569480.0 472273.0 534240.0 898710.0 620740.0 True False 645972.1489592157 669560.0102501262 757556.0315282613 823294.6475510616 705120.8970695687 565925.6640821204 520014.9637803075 532386.8461325527 735526.9186354588 615240.7265284124 1.0499502407849526 1.088289479840222 1.2313164568979107 1.338166691591801 1.1460894356723077 0.9198442815634791 0.8452219454238172 0.8653309561228576 1.195510776384683 1.0 19.23079148166344 -6.205315524927941 5.493979703766839 0.9492894714441972 1.1810393371843937 0.43518310773414903 0.11643718493128195 0.20153614456031468 13.357521591605773 0.04122738142529103 0.040853459013146534 6.232818423562061e-07 6.205315524927941 0.23174986574019651 KTQYEEHIYR ddPTM_KYSE-520_SHP099_60min_R1 1 KTQYEEHIYR 10 1 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 0 103.22 0.0033269 303990000.0 499080.0 391200.0 305410.0 239720.0 404670.0 371010.0 284920.0 293530.0 330280.0 257050.0 False True 471395.0375086858 372406.16479682823 325097.2172732776 262502.916725554 436515.22674266004 368694.3889708284 313722.4941512333 292511.8129404172 270309.4776812532 254772.73698187375 1.850256990182682 1.461719056789517 1.276028279652258 1.0303414715218537 1.7133514045253464 1.4471500888929878 1.2313817320789453 1.1481283924081267 1.0609827443997073 1.0 17.958851378697315 -1.0000000000000013 0.14628317040402875 0.9315615139245969 3.4940608382077 0.46708360011984895 0.2018887468622324 76.32374508128134 0.737856412316977 0.8399634638542245 41.27862331920869 0.09999999999999969 1.0000000000000013 2.562499324283103 KTS(ph)ATVGPK ddPTM_KYSE-520_SHP099_60min_R1 1 KTSATVGPK 9 1 P16104 P16104 H2AFX Histone H2AX 1 KT(0.049)S(0.932)AT(0.019)VGPK 122.51 0.00075954 933300000.0 1867000.0 1577800.0 1641300.0 1663600.0 1729200.0 1556900.0 1774100.0 1625100.0 1873300.0 1619900.0 True False 1763433.788227769 1502000.1196739154 1747100.8241728495 1821708.0438204238 1865278.2021978598 1547182.8095972699 1953443.3415474608 1619462.907401193 1533155.942050055 1605548.946263129 1.0983369845759687 0.9355056556636155 1.0881641623191736 1.1346325180932038 1.1617697526688573 0.9636472392811788 1.2166825222576032 1.0086661706392996 0.954910746021436 1.0 20.614635216608168 -7.506898123126527 24.625635655591577 0.9788996908317518 1.0823315920139738 0.24342767301578683 0.08003167863455121 823.1099665175425 1268397.6570263868 0.04548660347299681 0.020814758164646074 3.11244636967616e-08 7.506898123126527 0.10343190118222201 KTS(ph)DANETEDHLESLICK ddPTM_KYSE-520_SHP099_60min_R1 8 KTSDANETEDHLESLICK 18 1 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 KT(0.126)S(0.861)DANET(0.013)EDHLESLICK;KT(0.035)S(0.965)DANETEDHLESLICK;KT(0.138)S(0.862)DANETEDHLESLICK;KT(0.039)S(0.959)DANET(0.002)EDHLESLICK;KT(0.129)S(0.816)DANET(0.055)EDHLESLICK;KT(0.161)S(0.839)DANETEDHLESLICK;KT(0.268)S(0.731)DANET(0.001)EDHLESLICK;KT(0.104)S(0.896)DANETEDHLESLICK 286.57 5.414299999999999e-38 82548300000.0 10934980.0 12077470.0 11583130.0 18530400.0 15824070.0 20344400.0 23753500.0 27412500.0 30282200.0 25166900.0 True False 10328394.861057792 11497250.21254794 12329797.093463283 20291523.644632112 17069334.282357782 20217423.053227987 26154735.591819853 27317412.435625598 24783715.832140148 24943940.84555195 0.4140642781751774 0.4609235679212313 0.49430028598155357 0.8134850772086615 0.6843078400501266 0.8105143921888829 1.0485406357305331 1.0951522297446792 0.9935765958392908 1.0 24.572186076018866 -5.704598132917179 0.6073412201658522 1.0672448705892772 0.3527493088715832 0.8967467186177965 0.07831373649562313 0.3031862431452476 0.22922961976712866 0.057309771741586586 0.12055816728465159 1.9742487289623826e-06 5.704598132917179 -0.714495561717694 down KTS(ph)DDGGDS(ph)PEHDTDIPEVDLFQLQVNTLR ddPTM_KYSE-520_SHP099_60min_R1 1 KTSDDGGDSPEHDTDIPEVDLFQLQVNTLR 30 1 Q9HAJ7 Q9HAJ7 SAP30L Histone deacetylase complex subunit SAP30L 2 KT(0.476)S(0.532)DDGGDS(0.762)PEHDT(0.23)DIPEVDLFQLQVNTLR 99.53 0.00047593 110600000.0 47768.0 63554.0 54079.0 98856.0 62959.0 53332.0 49665.0 58223.0 82305.0 56319.0 True False 45118.2138168528 60500.77044350114 57565.01886945931 108251.24451785977 67913.5151122919 52999.13520549909 54685.62288369012 58021.03800235035 67360.4867402069 55820.057475518995 0.8082796015865856 1.0838536035193973 1.0312604728991115 1.93928937757428 1.2166507557265904 0.9494640027689496 0.9796769361563914 1.0394299222604104 1.206743414224344 1.0 15.768495989435399 -6.1929033632089645 7.923809969125093 1.0342909800374624 1.2392237343692805 0.09161639966203439 0.28012102017567847 0.81796214867335 86.41122328943105 0.09908405880776583 0.09904007731288555 6.413522708466519e-07 6.1929033632089645 0.204932754331818 KTS(ph)DFNTFLAQEGCTK ddPTM_KYSE-520_SHP099_60min_R1 1 KTSDFNTFLAQEGCTK 16 1 Q9UHD1;Q9UHD1-2;E9PHZ2 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 KT(0.464)S(0.536)DFNTFLAQEGCTK 106.03 0.00036311 196650000.0 299320.0 283000.0 283910.0 289940.0 311670.0 256830.0 282190.0 290440.0 388510.0 277620.0 True False 282716.12292037305 269404.2552083398 302211.29287206166 317495.81042636017 336196.65584027726 255227.02870374863 310716.5191090008 289432.5314292055 317966.3775400986 275160.50278509164 1.0274589559867993 0.9790804002809674 1.0983091316274323 1.153856775273934 1.2218201829019648 0.9275569208531661 1.1292191864894194 1.0518680133945704 1.1555669302888272 1.0 18.069913871346078 -4.770016544240624 24.696149344757604 1.0963897461633363 1.0032696761939082 0.16262699255236734 0.08035333632760008 241.05834741906727 694085.0054725859 0.020764984342955928 0.04435372040735049 1.698178959914066e-05 4.770016544240624 -0.09312006996942812 KTS(ph)FDQDS(ph)DVDIFPSDFPTEPPSLPR ddPTM_KYSE-520_SHP099_60min_R1 2 KTSFDQDSDVDIFPSDFPTEPPSLPR 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KT(0.477)S(0.547)FDQDS(0.975)DVDIFPS(0.002)DFPTEPPSLPR;KT(0.471)S(0.542)FDQDS(0.987)DVDIFPSDFPTEPPSLPR 157.74 6.3437e-08 311770000.0 208624.0 211069.0 183560.0 178639.0 199234.0 206808.0 199833.0 232836.0 281140.0 218256.0 True False 197051.2108383666 200928.92841897192 195392.5713063841 195616.79685022618 214912.58231360637 205517.2345604677 220034.0698221375 232028.34626033113 230092.06296266065 216322.4216405984 0.9109144088898501 0.9288400476248297 0.9032469673024118 0.9042835012970922 0.9934826944137379 0.9500505449311094 1.0171579448555994 1.0726042381581085 1.0636533245959097 1.0 17.72282368163796 -6.49758347044728 1.0591331347924093 1.0521753016255517 0.9141461523247467 0.7764549095625033 0.028812475759632077 0.2264092423868425 0.5228338516722686 0.017874211655798892 0.012929217388501717 3.1799224554682763e-07 6.49758347044728 -0.138029149300805 KTS(ph)LDLR ddPTM_KYSE-520_SHP099_60min_R1 5 KTSLDLR 7 1 Q5T457;A0A0A0MRN9;Q9GZV1-2;Q9GZV1 Q5T457 ANKRD2 Ankyrin repeat domain-containing protein 2 1 KT(0.356)S(0.644)LDLR;KT(0.359)S(0.641)LDLR;KT(0.142)S(0.858)LDLR;KT(0.025)S(0.975)LDLR;KT(0.142)S(0.858)LDLR 120.06 0.0016503 4265800000.0 20920100.0 17996100.0 17405200.0 17084800.0 17465000.0 17944300.0 17478900.0 17179100.0 18953600.0 17179900.0 True False 19759620.349814564 17131540.343303207 18527167.041304648 18708534.255267587 18839396.137743235 17832302.967599872 19245837.789625138 17119509.711732075 15512104.02137402 17027699.45175995 1.1604398119542947 1.0060983512093011 1.088060491893972 1.0987117965212798 1.106397032148464 1.047252626117779 1.1302664722353861 1.005391818209631 0.9109923548580557 1.0 24.021380195309305 -7.4746578044703265 5.025037151523372 0.9551852794737951 1.0863545162310855 0.6089092962245264 0.04470526519724852 0.12280234594128488 7.074237338303367 0.025305923941293954 0.011060951348859354 3.352294739325723e-08 7.4746578044703265 0.13116923675729042 KTS(ph)LDVSNSAEPGFLAPGAR ddPTM_KYSE-520_SHP099_60min_R1 2 KTSLDVSNSAEPGFLAPGAR 20 1 H0Y6F6;A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-5;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 H0Y6F6 NAV1 Neuron navigator 1 1 KT(0.022)S(0.978)LDVSNSAEPGFLAPGAR;KTS(0.945)LDVS(0.054)NS(0.001)AEPGFLAPGAR 231.52 4.4084e-20 881520000.0 1043128.0 1018440.0 850417.0 710067.0 733051.0 870630.0 755423.0 849511.0 1028140.0 858870.0 True False 985263.6104158863 969512.6136903932 905236.2405353106 777551.5541905727 790737.9432103536 865196.0752261993 831788.5290580062 846564.2446183588 841455.6933002424 851261.0799907485 1.1574164889890115 1.1389133562889187 1.0634061180679713 0.9134113757427076 0.928901792642684 1.0163698253837732 0.9771250543570559 0.994482497223483 0.9884813403067685 1.0 19.699242145762607 -4.963918869094018 3.3234938299640655 0.9740375340085456 1.147676024368975 0.83858352356567 0.030707594629000377 0.09176758339251524 2.1012532610716685 0.009053148102281614 0.020328297138378797 1.0866285986312935e-05 4.963918869094018 0.17363849036042933 KTS(ph)LFEEDEEDDLFAIAK ddPTM_KYSE-520_SHP099_60min_R1 2 KTSLFEEDEEDDLFAIAK 18 1 Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 Q641Q2 FAM21A WASH complex subunit FAM21A 1 KT(0.194)S(0.806)LFEEDEEDDLFAIAK;KT(0.187)S(0.813)LFEEDEEDDLFAIAK 194.77 8.366e-13 1128850000.0 733520.0 715460.0 626030.0 705570.0 697820.0 792670.0 808750.0 968230.0 1150810.0 904700.0 True False 692830.1833641329 681088.2276726454 666384.8954834155 772627.1606626433 752734.463947323 787722.6525039928 890506.3426393713 964871.4361165817 941851.9135592927 896685.0618459493 0.7726572158321081 0.7595623666023071 0.7431649347559897 0.8616483016590956 0.839463593156906 0.8784830773051551 0.9931093764472241 1.076042723551412 1.0503709202207085 1.0 19.77424183807084 -6.502710898572387 0.9904416406683747 1.0572884378183571 0.7702168548014984 0.9109781459283006 0.03509331998875888 0.14767288412058746 0.2990287764354056 0.02373419568999781 0.01711781272912699 3.1425999656882513e-07 6.502710898572387 -0.28707158301685876 KTS(ph)PASLDFPESQK ddPTM_KYSE-520_SHP099_60min_R1 3 KTSPASLDFPESQK 14 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 KT(0.33)S(0.67)PASLDFPESQK;KT(0.105)S(0.894)PAS(0.001)LDFPESQK;KT(0.005)S(0.995)PASLDFPESQK 158.29 1.469e-05 1592700000.0 4139920.0 3911810.0 3657820.0 3162800.0 3420800.0 4109850.0 3510800.0 3963480.0 4630310.0 3957010.0 True False 3910270.3848740864 3723880.775853487 3893608.929918932 3463391.5610695034 3689997.4983104602 4084198.9016785524 3865705.9261060967 3949731.612963191 3789562.4246163396 3921953.9699071916 0.9970209785421368 0.9494962981275399 0.9927727249718511 0.8830780747667624 0.9408569112803177 1.0413683926471988 0.9856581580934705 1.0070826030262299 0.96624347294571 1.0 21.903141172733807 -6.234114689763573 24.72664873787207 0.9996124229224261 0.9508345542568097 0.3240645310712844 0.03419357509026018 792.9392445678342 717546.6203605413 0.011440833282895711 0.011437837561076487 5.832910467182059e-07 6.234114689763573 -0.0487778686656164 KTS(ph)QSEEEEAPR ddPTM_KYSE-520_SHP099_60min_R1 6 KTSQSEEEEAPR 12 1 Q7RTP6;A0A5F9ZHV5;J3KSK6;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 KT(0.186)S(0.627)QS(0.186)EEEEAPR;KT(0.207)S(0.791)QS(0.002)EEEEAPR;KT(0.297)S(0.703)QSEEEEAPR;KT(0.005)S(0.995)QSEEEEAPR;KT(0.059)S(0.488)QS(0.453)EEEEAPR;KT(0.213)S(0.726)QS(0.062)EEEEAPR 233.14 2.3785999999999996e-15 4335865000.0 3055116.0 2904194.0 2858922.0 3171765.0 3192650.0 4003459.0 4294701.0 4978750.0 5620968.0 4467706.0 True False 2885642.6252572453 2764672.1609559353 3043212.6865569367 3473208.591974077 3443893.391306388 3978471.927373284 4728851.2893226035 4961479.878298981 4600341.904272255 4428125.600662669 0.6516623252116898 0.6243436637258442 0.6872462438964061 0.7843518692094712 0.7777316413046209 0.8984550769693401 1.067912637485922 1.12044696237986 1.0388914676638379 1.0 22.07826471305233 -6.227034583187817 1.0287843157790544 1.0789865746149223 0.6549764413541811 0.9297868431807453 0.04628802279689917 0.1253692672164976 0.28012956318034826 0.026814200782636542 0.025149671222137338 5.928781113817819e-07 6.227034583187817 -0.4240101332607412 KTS(ph)S(ph)DDES(ph)EEDEDDLLQR ddPTM_KYSE-520_SHP099_60min_R1 1 KTSSDDESEEDEDDLLQR 18 1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 3 KT(0.493)S(0.594)S(0.913)DDES(1)EEDEDDLLQR 133.68 0.00033006 0.0 329530.0 318130.0 294030.0 290080.0 274100.0 282790.0 306530.0 306550.0 400800.0 280360.0 True False 311250.3139982311 302846.55727713445 312983.64426463353 317649.1159842682 295670.1105843358 281025.00271437597 337517.0438445087 305486.64959930815 328024.8233457862 277876.22851677926 1.120104140104365 1.0898613346439865 1.1263419182534873 1.1431316657771873 1.0640352798889456 1.011331570945827 1.2146308651375988 1.0993622996465193 1.1804709783801415 1.0 18.0840828959928 -9.98048713226228 13.758053204746467 0.9999999945862507 1.114603090959639 0.29328050888949586 0.05421496285820232 0.0 0.0 0.05238012802901583 0.012704047091000502 1.045954680659156e-10 9.98048713226228 0.11460309637338828 KTS(ph)SVSSISQVSPER ddPTM_KYSE-520_SHP099_60min_R1 2 KTSSVSSISQVSPER 15 1 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 KT(0.002)S(0.772)S(0.185)VS(0.02)S(0.02)ISQVSPER;KT(0.061)S(0.448)S(0.448)VS(0.02)S(0.02)IS(0.001)QVSPER 154.46 2.853e-06 1055630000.0 1634380.0 1594400.0 1556610.0 1749590.0 1373390.0 1352590.0 1447100.0 1840630.0 1859500.0 1604390.0 True False 1543717.6833442454 1517802.630756809 1656951.5712640607 1915870.507566587 1481467.9794798272 1344147.984092213 1593386.990335003 1834245.2841362723 1521861.674180365 1590176.3527965336 0.9707839514965844 0.9544869838414802 1.041992335221244 1.204816374106732 0.9316375362232444 0.8452823372252722 1.0020190449523558 1.153485448900376 0.9570395582250809 1.0 20.600755340617788 -4.7522996091346865 24.487396356626594 1.0195020943436732 0.9626354406632146 0.046730196841579974 0.09777105603917566 558.7987956376937 1497099.5086120637 0.026861566054673956 0.06885076942604866 1.768888224592081e-05 4.7522996091346865 -0.05686665368045862 KTS(ph)TSPPPEK ddPTM_KYSE-520_SHP099_60min_R1 2 KTSTSPPPEK 10 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KT(0.338)S(0.431)T(0.116)S(0.116)PPPEK;KT(0.072)S(0.354)T(0.287)S(0.287)PPPEK 105.65 0.0013542 1212190000.0 2390990.0 2091620.0 1519240.0 1919550.0 1917350.0 2099280.0 1908890.0 2225210.0 2212850.0 2167230.0 True False 2258357.018379604 1991135.4356143726 1617172.641269947 2101983.454866247 2068234.5367708015 2086177.6148316215 2101859.230171093 2217491.265877918 1811052.2214089918 2148030.0282794246 1.0513619403116778 0.9269588457333043 0.7528631443599066 0.9785633474360407 0.9628517802553536 0.9712050517760467 0.9785055155186472 1.0323371818289393 0.8431223947365613 1.0 21.034582730872362 KTSAS(ph)DVTNIYPGDAGK ddPTM_KYSE-520_SHP099_60min_R1 1 KTSASDVTNIYPGDAGK 17 1 Q15042-4;Q15042;Q15042-3 Q15042-4 RAB3GAP1 Rab3 GTPase-activating protein catalytic subunit 1 KTS(0.103)AS(0.897)DVTNIYPGDAGK 261.16 9.288899999999999e-29 0.0 1563500.0 1520900.0 1494700.0 1459100.0 1561300.0 2087400.0 2203000.0 2458800.0 3019400.0 2327700.0 True False 1476769.5382400223 1447833.6810825574 1591050.753604557 1597772.4253055884 1684165.4274181814 2074371.7623182836 2425700.7392080803 2450270.996688237 2471153.0728799095 2307078.388923196 0.6401037543112215 0.6275615462543161 0.6896387921812932 0.6925522916676149 0.7299992213113519 0.8991336281757093 1.0514166969160723 1.06206664171124 1.0711179493269378 1.0 21.137635593453197 -6.376106581023794 1.5993119339653632 1.0588427721333258 0.6583072768908155 0.9772023115986338 0.02691066088867783 0.05138727678686738 0.26210931967340784 0.012638339178719682 0.010520715925811984 4.2062338974155646e-07 6.376106581023794 -0.4005354952425103 KTSAT(ph)VGPK ddPTM_KYSE-520_SHP099_60min_R1 2 KTSATVGPK 9 1 P16104 P16104 H2AFX Histone H2AX 1 KT(0.01)S(0.342)AT(0.649)VGPK;KT(0.002)S(0.256)AT(0.742)VGPK 100.72 0.0028252 1494110000.0 4311400.0 3774900.0 3533200.0 3537600.0 3890600.0 3766100.0 3757800.0 3811300.0 4463100.0 3785500.0 True False 4072238.047437175 3593548.1377595793 3760955.7253198773 3873812.4403817793 4196768.085514111 3742594.3729361403 4137675.0965937967 3798079.4898641086 3652713.545595256 3751963.415074434 1.0853618750854443 0.9577780325153539 1.0023966945437992 1.032476069680687 1.1185525073758888 0.997502896190125 1.1028026232797663 1.012291184558035 0.9735472182163565 1.0 21.83921432970731 -3.897385473049624 19.03470564121073 1.026505953817784 6.37174511234867 0.12430059152211015 0.04917784685897104 693.1357458093944 130393.71319608559 0.012043844496653635 2271.592202609284 0.00012665272168974095 3.897385473049624 5.345239158530886 KTSAVS(ph)SPLLDQQR ddPTM_KYSE-520_SHP099_60min_R1 1 KTSAVSSPLLDQQR 14 1 Q5T200-2;Q5T200;A0A087WX14 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KTSAVS(0.892)S(0.108)PLLDQQR 209.08 1.1558e-13 823930000.0 801050.0 732650.0 715280.0 524800.0 665880.0 575490.0 531670.0 544970.0 780360.0 521630.0 True False 756614.1596464145 697452.3942699302 761388.0932884639 574676.8342131268 718280.967661064 571898.1534428234 585416.3921991643 543079.6262669546 638666.2952747452 517008.76402199926 1.463445520266306 1.3490146450210907 1.4726792779397953 1.1115417652546287 1.389301338092018 1.1061672320480984 1.13231425255734 1.0504263448885094 1.2353103848885032 1.0 18.979829210884006 -4.371460038474428 0.2638282381906462 1.0157703376688787 1.8154347509609208 0.6205225398861638 0.10252672172485812 5.600400420960657 0.34454304247295386 0.1342951451222099 1.4598612868899001 4.251478249025037e-05 4.371460038474428 0.7996644132920421 KTSAVSS(ph)PLLDQQR ddPTM_KYSE-520_SHP099_60min_R1 2 KTSAVSSPLLDQQR 14 1 Q5T200-2;Q5T200;A0A087WX14 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 KT(0.007)S(0.007)AVS(0.128)S(0.859)PLLDQQR;KTSAVS(0.249)S(0.751)PLLDQQR 86.8 0.0017984000000000001 1563710000.0 1783320.0 1904360.0 1781950.0 1398390.0 1544840.0 1649150.0 1503330.0 1531550.0 2125120.0 1603990.0 True False 1684395.6846397168 1812871.6870973625 1896817.3482208063 1531292.5651587173 1666410.119062769 1638857.0431288697 1655301.267486921 1526237.4105164574 1739251.7779156652 1589779.8964853378 1.0595150236605422 1.140328727961168 1.193132050804179 0.9632104221119393 1.0482017811062048 1.030870403350823 1.0412141147000518 0.9600306393926863 1.0940204878428628 1.0 20.600395608903124 -5.262649127599973 24.999998916939365 1.0205400202876762 1.1319256131050879 0.5294676692055424 0.048092399670622475 81.32524847406408 1680633.0545511208 0.012926499023411387 0.02045900949358817 5.461989644292376e-06 5.262649127599973 0.11138559281741167 KTSFDQDS(ph)DVDIFPSDFPTEPPS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 1 KTSFDQDSDVDIFPSDFPTEPPSLPR 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KT(0.4)S(0.357)FDQDS(0.807)DVDIFPS(0.15)DFPT(0.002)EPPS(0.284)LPR 149.99 6.2077e-07 114560000.0 112640.0 108220.0 86790.0 83113.0 101410.0 91468.0 102470.0 116900.0 134010.0 108440.0 True False 106391.63465772681 103020.9487584683 92384.62226890985 91012.0345311653 109390.39005602883 90897.11428366805 112828.66761082703 116494.50118466525 109677.16211718773 107479.30596504347 0.989880179281485 0.9585189244892853 0.8595573021187631 0.8467865856964691 1.0177809493076455 0.8457173543084786 1.0497710847474526 1.0838784279324791 1.0204491100162025 1.0 16.71369938489734 -6.783340127114125 24.892492511764914 1.0455146037941065 0.9198803508021934 0.49295999396603896 0.058863342171033145 190.37471454366957 216378.68466219705 0.02475845240732986 0.016708154416100535 1.646872102835545e-07 6.783340127114125 -0.1256342529919131 KTSFDQDS(ph)DVDIFPSDFPTEPPSLPR ddPTM_KYSE-520_SHP099_60min_R1 14 KTSFDQDSDVDIFPSDFPTEPPSLPR 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 KT(0.01)S(0.01)FDQDS(0.98)DVDIFPSDFPTEPPSLPR;KT(0.022)S(0.022)FDQDS(0.956)DVDIFPSDFPTEPPSLPR;KT(0.087)S(0.067)FDQDS(0.846)DVDIFPSDFPTEPPSLPR;KT(0.094)S(0.062)FDQDS(0.844)DVDIFPSDFPTEPPSLPR;KT(0.048)S(0.034)FDQDS(0.918)DVDIFPSDFPTEPPSLPR;KT(0.008)S(0.016)FDQDS(0.976)DVDIFPSDFPTEPPSLPR;KT(0.164)S(0.164)FDQDS(0.672)DVDIFPSDFPTEPPSLPR;KT(0.012)S(0.008)FDQDS(0.98)DVDIFPSDFPTEPPSLPR;KT(0.043)S(0.043)FDQDS(0.914)DVDIFPSDFPTEPPSLPR;KT(0.063)S(0.04)FDQDS(0.897)DVDIFPSDFPTEPPSLPR;KT(0.136)S(0.136)FDQDS(0.728)DVDIFPSDFPTEPPSLPR;KT(0.065)S(0.046)FDQDS(0.889)DVDIFPSDFPTEPPSLPR;KT(0.314)S(0.314)FDQDS(0.37)DVDIFPS(0.001)DFPTEPPSLPR;KT(0.046)S(0.032)FDQDS(0.922)DVDIFPSDFPTEPPSLPR 210.36 1.388e-21 53146700000.0 4746269.0 4767718.0 4507086.0 4334958.0 4936061.0 4392672.0 4286578.0 4547464.0 5876604.0 4695553.0 True False 4482983.997117317 4538669.670789387 4797619.975152576 4746951.104967347 5324500.918354712 4365255.704669058 4719907.137209757 4531689.908770071 4809560.85073139 4653954.053504949 0.9632634842497269 0.9752287234918574 1.0308696476148986 1.0199823742119587 1.1440811097704684 0.9379670822881311 1.0141714084295992 0.9737289746892109 1.0334353961035028 1.0 22.15002553702752 -4.681777196340642 5.3872479429416185 1.0196937674056452 0.9667770430086882 0.13882112467949703 0.050036124602501564 0.3983563123134757 19.422000198401182 0.012981099563018489 0.03552169300692432 2.080763895945638e-05 4.681777196340642 -0.05291672439695705 KTSLSDLNDPIILS(ph)S(ph)DDDDDNDR ddPTM_KYSE-520_SHP099_60min_R1 2 KTSLSDLNDPIILSSDDDDDNDR 23 1 Q9GZR1-2;Q9GZR1;H0Y4F4;F8W6D9 Q9GZR1-2 SENP6 Sentrin-specific protease 6 2 KTSLSDLNDPIILS(1)S(1)DDDDDNDR;KTSLSDLNDPIILS(1)S(1)DDDDDNDR 134.17 8.849799999999999e-07 246716000.0 411770.0 401120.0 345800.0 371330.0 372980.0 327150.0 302250.0 298450.0 345100.0 291670.0 True False 388928.2972568555 381849.59310660535 368090.8212995621 406621.09155556484 402331.4040340959 325108.13549986924 332804.3796757342 297414.7466087534 282438.53926305135 289086.0307158264 1.3453721589168548 1.3208856621715015 1.273291623217166 1.4065746814147386 1.3917358892709364 1.1246068677024827 1.1512295452383283 1.028810509702955 0.9770051446750482 1.0 18.141139370681994 -6.678430308701419 1.3762577559684 1.0038292183267297 1.3452635944371927 0.8799353653019465 0.054524601224622014 0.1449752582035688 0.5590431531976328 0.03340393430447024 0.02106995526413978 2.0968612369228192e-07 6.678430308701419 0.341434376110463 KTSQS(ph)EEEEAPR ddPTM_KYSE-520_SHP099_60min_R1 1 KTSQSEEEEAPR 12 1 Q7RTP6;A0A5F9ZHV5;J3KSK6;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 KT(0.001)S(0.036)QS(0.963)EEEEAPR 191.57 8.2043e-08 1164800000.0 1018800.0 1126400.0 1061900.0 1242700.0 1264100.0 1675200.0 1719800.0 2142100.0 2348600.0 1918100.0 True False 962285.1330725516 1072286.0532391316 1130351.7731000746 1360805.834368621 1363577.4782548656 1664744.4554161127 1893654.1676305314 2134669.555069899 1922153.4433880113 1901107.1262592187 0.5061709147164296 0.5640324200714841 0.5945755278526843 0.7157965038226222 0.7172544142412204 0.8756710405330007 0.9960796745613424 1.122856006157979 1.0110705582226738 1.0 20.858408398611232 -6.145560914998409 0.8442090369814329 1.0687280044218028 0.537819772692571 0.9485363541295421 0.04704411866915383 0.12375587765066665 0.1932342580057261 0.029782975363076853 0.03166584616464095 7.152190690059535e-07 6.145560914998409 -0.5309082317292318 KTSS(ph)DDES(ph)EEDEDDLLQR ddPTM_KYSE-520_SHP099_60min_R1 4 KTSSDDESEEDEDDLLQR 18 1 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 2 KT(0.145)S(0.203)S(0.652)DDES(1)EEDEDDLLQR;KT(0.127)S(0.161)S(0.711)DDES(1)EEDEDDLLQR;KT(0.288)S(0.331)S(0.382)DDES(1)EEDEDDLLQR;KT(0.113)S(0.149)S(0.738)DDES(1)EEDEDDLLQR 188.38 1.3117e-12 2870320000.0 2607470.0 2648580.0 2502080.0 2336090.0 2547880.0 2431570.0 2425400.0 2592010.0 2942600.0 2472800.0 True False 2462828.4412374203 2521338.2412003716 2663368.0802695444 2558111.2912289277 2748383.6605458483 2416393.6696849028 2670583.1016229116 2583018.922289683 2408298.016909457 2450892.915809289 1.0048698681819765 1.0287427185972429 1.0866929612018956 1.0437466585047577 1.1213805559670187 0.9859238051969339 1.0896367949805268 1.0539093346870136 0.9826206609741791 1.0 21.224876020805212 -7.756845494660066 24.949759088106127 0.991310317398846 1.053361059111401 0.2832091540691982 0.03847414353407571 124.82127936874704 677944.6766599898 0.027054863254184422 0.009462323608313322 1.7504693277932678e-08 7.756845494660066 0.06205074171255509 KTSS(ph)VSSISQVSPER ddPTM_KYSE-520_SHP099_60min_R1 1 KTSSVSSISQVSPER 15 1 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 KT(0.007)S(0.205)S(0.34)VS(0.188)S(0.257)IS(0.003)QVS(0.001)PER 60.733999999999995 0.035325 608680000.0 912370.0 843320.0 885770.0 911430.0 775230.0 808110.0 755760.0 993050.0 959900.0 844930.0 True False 861759.017335497 802805.641350874 942868.1514821091 998052.0331685779 836236.190544672 803066.2857368165 832159.5963068091 989605.3413296114 785606.3571098312 837444.5775455927 1.0290340882750304 0.9586373389672669 1.1258872249737348 1.1917827876964686 0.9985570543611826 0.9589485767410029 0.993689157013503 1.181696518031051 0.9380995210600199 1.0 19.67563418985472 KTST(ph)SPPPEK ddPTM_KYSE-520_SHP099_60min_R1 4 KTSTSPPPEK 10 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KT(0.019)S(0.091)T(0.445)S(0.445)PPPEK;KT(0.008)S(0.076)T(0.458)S(0.458)PPPEK;KT(0.031)S(0.101)T(0.434)S(0.434)PPPEK;KT(0.065)S(0.095)T(0.559)S(0.281)PPPEK 121.02 0.00043394 1951160000.0 3444150.0 2928070.0 2432340.0 2608710.0 2762760.0 3002810.0 2899850.0 3282940.0 3179350.0 2989480.0 True False 3253096.133757196 2787401.122077326 2589132.528281603 2856641.014062737 2980173.4940458937 2984068.3489541877 3192995.137808698 3271552.247383956 2602060.184891286 2962995.5329802427 1.0979078765215564 0.9407375377558196 0.8738226229039905 0.9641057444286688 1.0057974981313498 1.0071119972134246 1.0776240133568873 1.104136746400478 0.8781856590496036 1.0 21.49862502061422 -5.872263135277413 3.228947328479399 1.022677166667027 0.9601479469318787 0.06055442077596673 0.07622290698943505 0.5643640164706504 11.672846099047634 0.02526681104075982 0.02947668764227699 1.3419516378573753e-06 5.872263135277413 -0.06252921973514824 KTSTS(ph)PPPEK ddPTM_KYSE-520_SHP099_60min_R1 3 KTSTSPPPEK 10 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KT(0.001)S(0.001)T(0.001)S(0.997)PPPEK;KT(0.002)S(0.005)T(0.106)S(0.888)PPPEK;KTS(0.003)T(0.092)S(0.905)PPPEK 169.6 5.021e-05 4012030000.0 5689800.0 4927700.0 4061600.0 4623000.0 4422900.0 4824000.0 4919300.0 5219600.0 5082700.0 4546900.0 True False 5374175.451664908 4690965.8953715 4323417.234789772 5062368.530044369 4770957.067141405 4793891.626628055 5416590.851741409 5201494.425863804 4159809.804440194 4506618.003434671 1.1925074296443667 1.0409060390288971 0.9593485029116569 1.1233187561462141 1.0586557510543984 1.0637448354784989 1.2019192324739332 1.1541902202271284 0.9230446870069393 1.0 22.103613736726782 -7.767063972836267 24.999988224139155 0.9615223054779143 1.0943888489368268 0.3678566271399035 0.0720253334609431 171.0333466670789 760163.0954558715 0.06607133126374921 0.018955892596727874 1.7097634434279613e-08 7.767063972836267 0.13286654345891247 KTT(ph)PILR ddPTM_KYSE-520_SHP099_60min_R1 1 KTTPILR 7 1 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 KT(0.092)T(0.908)PILR 107.55 0.0042143 0.0 140490.0 136080.0 106770.0 110170.0 116320.0 124940.0 110940.0 119500.0 144070.0 135840.0 True False 132696.73964012822 129542.51253975561 113652.56503804009 120640.52367618155 125473.72222973357 124160.20311586017 122154.89787006115 119085.48239150975 117910.51970915035 134636.56328192074 0.985592148265619 0.962164432766317 0.8441433906780476 0.8960457749026738 0.9319438878352774 0.9221878521652123 0.907293642175612 0.884495856761822 0.875768935532415 1.0 17.038710730612664 -4.544337487453321 24.063711803694975 0.904463733323461 0.9797352414370601 0.32047108132094904 0.03894907771519059 133.25410549491974 149429.97680464954 0.009518989634703885 0.02519095901057401 2.8553707907015033e-05 4.544337487453321 0.07527150811359917 KTTAS(ph)PSVR ddPTM_KYSE-520_SHP099_60min_R1 5 KTTASPSVR 9 1 Q9Y3P9;Q9Y3P9-2 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 KTT(0.021)AS(0.974)PS(0.005)VR;KTT(0.004)AS(0.996)PSVR;KT(0.001)T(0.001)AS(0.993)PS(0.005)VR;KT(0.069)T(0.069)AS(0.859)PS(0.003)VR;KT(0.002)T(0.002)AS(0.995)PS(0.001)VR 136.38 0.0003083 4490570000.0 5742410.0 5108020.0 4776040.0 4631730.0 5138390.0 4872710.0 4652620.0 4632510.0 5867960.0 4878810.0 True False 5423867.070089469 4862623.051905672 5083911.180334188 5071928.226619591 5542752.059560179 4842297.609449995 5122952.234795415 4616440.904045965 4802486.383233887 4835587.539056745 1.1216562674713726 1.0055909468354285 1.0513533545348415 1.0488752784752498 1.1462416955109815 1.001387643246876 1.059427048609428 0.9546804533594425 0.9931546775742344 1.0 22.20525976165007 -7.013970878918076 1.8627529595572263 0.9813221003192419 1.0647563637628437 0.38439456528660254 0.04456242896075375 0.3737356904374132 2.542700101379982 0.026869468663702732 0.013513501600477682 9.683427851179153e-08 7.013970878918076 0.08343426344360172 KTTEEQVQAS(ph)TPCPR ddPTM_KYSE-520_SHP099_60min_R1 1 KTTEEQVQASTPCPR 15 1 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 KTTEEQVQAS(0.562)T(0.438)PCPR 81.692 0.0045551 39979000.0 77496.0 73754.0 64263.0 61303.0 54997.0 68424.0 62180.0 77578.0 80613.0 80216.0 True False 73197.14239555398 70210.74713298908 68405.49580443546 67129.21868858095 59324.95100987494 67996.9404354059 68465.76121831988 77308.90002484125 65975.71128835794 79505.34864710367 0.9206568317868826 0.8830946386340615 0.8603886023827584 0.8443358821875492 0.7461755972317984 0.8552498868625863 0.8611466069058492 0.9723735741099421 0.8298273312554223 1.0 16.278764299155085 -9.815345295190419 5.170807533678515 1.0000001023227223 0.86301504888251 0.35138765982289566 0.05554955668065962 77322828.84549503 2.6398698318376476e-05 94.4384207533709 0.014235338829539083 1.5298706213898762e-10 9.815345295190419 -0.13698505344021228 KTTHFVEGGDAGNREDQINR ddPTM_KYSE-520_SHP099_60min_R1 3 KTTHFVEGGDAGNREDQINR 20 2 P18124;A8MUD9 P18124 RPL7 60S ribosomal protein L7 0 ;; 119.38 9.1456e-05 2856290000.0 1599260.0 1474930.0 1101070.0 1130960.0 1407500.0 1481410.0 1006150.0 1199580.0 1305430.0 988620.0 False True 1510545.8597542285 1404072.1488849355 1172046.7339742898 1238446.0983644782 1518262.2424204762 1472163.9706888632 1107861.4610777171 1195418.9369640776 1068396.8192123 979861.5959347205 1.541591043083255 1.4329290531542338 1.196134983590451 1.2638990072705991 1.549466015118348 1.5024203181312767 1.1306305560642915 1.2199875389786354 1.0903548252578703 1.0 19.902218459419913 -6.774663291891549 24.8844350137975 1.128575404997024 1.4046250067758081 0.6117005448524496 0.11820677955783748 182.54275229630656 343501.139846822 0.05359657190959544 0.036377516656512295 1.6801060980039944e-07 6.774663291891549 0.2760496017787841 KTTPS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 3 KTTPSPGR 8 1 Q14686 Q14686 NCOA6 Nuclear receptor coactivator 6 1 KT(0.001)T(0.03)PS(0.969)PGR;KTT(0.019)PS(0.981)PGR;KT(0.002)T(0.041)PS(0.957)PGR 94.616 0.0023696999999999998 2182000000.0 3407000.0 2833110.0 2717820.0 2637860.0 2756000.0 2776670.0 2561950.0 2729850.0 3107300.0 2923630.0 True False 3218006.9183138814 2697003.1430151933 2893015.0258657513 2888561.4212984745 2972881.5205050367 2759339.77257656 2820936.9082224905 2720380.7875017817 2543092.648658587 2897728.9127497235 1.1105272491691565 0.9307299696492116 0.9983732477999472 0.9968363184661916 1.0259350028999086 0.9522422061069049 0.9734992448088032 0.9387975443570213 0.8776157898929843 1.0 21.4664912040655 -6.6413920251232925 1.4421895914930372 0.9350270828553188 1.0062797250724707 0.2650690638048858 0.051140831528843654 0.5709079291525289 2.421953722802244 0.027393632687865172 0.018029624635986327 2.2835365900398287e-07 6.6413920251232925 0.07125264221715188 KTVEDEDQDS(ph)EEEKDNDSYIK ddPTM_KYSE-520_SHP099_60min_R1 4 KTVEDEDQDSEEEKDNDSYIK 21 2 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 KTVEDEDQDS(1)EEEKDNDSYIK;KTVEDEDQDS(0.999)EEEKDNDS(0.001)YIK;KTVEDEDQDS(1)EEEKDNDSYIK;KTVEDEDQDS(0.999)EEEKDNDS(0.001)YIK 217.68 3.6174e-19 4128340000.0 3983810.0 4119330.0 3705960.0 3473870.0 3883640.0 3492510.0 3556470.0 4044540.0 4962430.0 3488250.0 True False 3762820.11777165 3921431.2035596166 3944852.1113456567 3804025.5603428995 4189260.373111093 3470711.9496091907 3915992.6954023405 4030510.434742733 4061377.8046802217 3457346.8188174358 1.0883548324662147 1.1342313655709317 1.1410056086577305 1.1002730589938452 1.2116980426464719 1.003865718856729 1.1326583361809741 1.1657813479416406 1.174709399292892 1.0 21.72123390208012 -3.091305014940037 14.19604970618099 1.1207512810151268 1.1227212750876816 0.0 0.06607285471427313 0.0 0.0 0.014289398153489539 0.0 0.0008103917013286028 3.091305014940037 0.001969994072554826 KTVFPGAVPVLPAS(ph)PPPKDSLR ddPTM_KYSE-520_SHP099_60min_R1 2 KTVFPGAVPVLPASPPPKDSLR 22 2 Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;M0R2S2 Q9UBC2-3 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 KTVFPGAVPVLPAS(0.999)PPPKDS(0.001)LR;KTVFPGAVPVLPAS(0.999)PPPKDS(0.001)LR 71.085 0.0097245 691560000.0 599180.0 644660.0 697970.0 478820.0 408000.0 584370.0 490120.0 621140.0 779240.0 625100.0 True False 565942.2909642829 613689.5659456119 742962.2629914851 524326.9088375181 440107.27879755193 580722.7300689543 539666.1127102423 618985.4103151661 637749.6590418424 619562.1003204403 0.9134553108906679 0.9905214757781488 1.1991731944339747 0.8462862860177114 0.7103521641655074 0.93731157823986 0.871044423845688 0.9990691974138253 1.0293555056256596 1.0 19.240889369125814 -5.309939840834365 24.999717678891585 0.9040847821794387 1.0299980335261611 0.19958184366487497 0.10988362514764069 613.5470506628606 316253.36171452084 0.032869249815523194 0.04875311186951559 4.898466690123831e-06 5.309939840834365 0.1259132513467225 KTVFS(ph)PTLPAAR ddPTM_KYSE-520_SHP099_60min_R1 2 KTVFSPTLPAAR 12 1 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 KTVFS(0.999)PTLPAAR;KTVFS(0.999)PT(0.001)LPAAR 198.95 2.7547000000000002e-08 2624900000.0 3984500.0 3773900.0 3799800.0 3012800.0 3503500.0 4038900.0 3413400.0 3881700.0 5286100.0 4160100.0 True False 3763471.842096169 3592596.179260609 4044741.187894963 3299135.6061686487 3779205.51781182 4013691.7269461127 3758459.783573701 3868235.2886955934 4326277.491736935 4123244.750508829 0.9127451970033401 0.8713031596820113 0.9809607318109899 0.8001309177102618 0.9165610451199743 0.9734303854872557 0.911529635273261 0.9381532076693322 1.0492410112698383 1.0 21.975348669615236 -7.633433106167862 4.450868253633451 1.0234984217580887 0.9102006828103192 0.4599400697210746 0.049026801346702606 0.19146528292159093 6.374313865153469 0.03671835602664146 0.012590337569946038 2.3257706938166226e-08 7.633433106167862 -0.11329773894776951 KTVS(ph)EPNLK ddPTM_KYSE-520_SHP099_60min_R1 2 KTVSEPNLK 9 1 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;H0YI41;F8VWY3;C9JEB6;C9JF80;C9JAH2 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 KTVS(1)EPNLK;KT(0.001)VS(0.999)EPNLK 149.83 0.00018247 3636680000.0 3522100.0 3237100.0 3282800.0 3132600.0 3130500.0 3141600.0 3256500.0 3101100.0 3715600.0 3265700.0 True False 3326722.0918677235 3081584.857013836 3494414.5406657164 3430321.3621494644 3376852.5398915135 3121992.109082652 3585698.8003772656 3090343.0079021794 3040940.7026537033 3236768.4386761505 1.0277911920163076 0.952056013705514 1.0795997943229279 1.0597981990804624 1.0432789999869925 0.9645398391117399 1.1078020773842656 0.9547618454800988 0.9394989973077773 1.0 21.626122726862853 -7.370182951915408 23.713190268031177 0.960344263891718 1.0309571872815928 0.3095022931405689 0.04684016349831291 22.891002405373516 4974.906253309701 0.02521848786729596 0.012114566356418844 4.2639985475520215e-08 7.370182951915408 0.0706129233898748 KTVTAMDVVYALK ddPTM_KYSE-520_SHP099_60min_R1 4 KTVTAMDVVYALK 13 1 P62805 P62805 HIST1H4A Histone H4 0 ;;; 122.46 0.00021483 986730000.0 1279608.0 1998050.0 1200622.0 1774510.0 2167270.0 2124180.0 1983910.0 1075384.0 1874940.0 1030125.0 False True 1208625.593404693 1902060.678865805 1278016.0151831226 1943158.8968741158 2337821.8189205183 2110922.204695438 2184462.9838957377 1071653.743900512 1534498.1593910907 1020998.8939251225 1.183767779373648 1.8629409788619198 1.2517310476899 1.903193929431056 2.2897398154203765 2.067506847710893 2.1395351130085953 1.049613031196001 1.5029381212078248 1.0 19.961549872631362 -7.270411777155429 24.978422462140855 1.2072066501758292 1.8257830468229972 0.3942034919386358 0.3572739436774953 750.1933847350574 2088464.1272863792 0.20245382201295448 0.09948374145501335 5.3652284994822635e-08 7.270411777155429 0.618576396647168 KTVTAMDVVYALKR ddPTM_KYSE-520_SHP099_60min_R1 7 KTVTAMDVVYALKR 14 2 P62805 P62805 HIST1H4A Histone H4 0 ;;;;;; 135.47 4.9479000000000005e-06 8950790000.0 4183740.0 4968380.0 5998220.0 5170940.0 5750810.0 4651740.0 7009940.0 4076980.0 10140190.0 3835160.0 False True 3951659.6021210807 4729691.5671095755 6384874.858691332 5662384.5829001935 6203366.0293670315 4622706.7651846595 7718573.145621562 4062837.9079542817 8298987.109388008 3801183.4661093336 1.03958665435472 1.2442681626074228 1.6797071005958342 1.489637275702421 1.631956490570667 1.2161230328396089 2.0305710614704524 1.0688349942005726 2.183264023791611 1.0 21.85801722863571 -4.577525456942357 4.336779430519196 1.5468693602858226 1.0774925729602742 0.16967731760664406 0.36159824928899337 0.29680409466835495 11.339725071742441 0.08392688872431935 0.2609442699800495 2.645297631360765e-05 4.577525456942357 -0.46937678732554833 KTWVVS(ph)PAEK ddPTM_KYSE-520_SHP099_60min_R1 1 KTWVVSPAEK 10 1 P42566;B1AUU8 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 KT(0.001)WVVS(0.999)PAEK 84.17299999999999 0.003757 0.0 373360.0 323680.0 330640.0 283340.0 367310.0 320480.0 263590.0 315180.0 393050.0 309300.0 True False 352648.9765252927 308129.9269464149 351953.58344270475 310268.548410723 396215.20729198266 318479.7654439798 290236.2495904938 314086.71414356516 321682.02798418485 306559.84263175866 1.150343024376146 1.0051216242191978 1.1480746480727853 1.0120978199464281 1.292456323993872 1.0388828579434635 0.9467523440084981 1.024552698902732 1.0493286570824316 1.0 18.225809200036252 -6.5083924787616825 24.805613495901994 1.005149197572417 1.1160456790357072 0.3315394606805774 0.07886520716010079 754.1488755370074 1291373.66068432 0.027697479295425168 0.023540496241467677 3.1017552161127074e-07 6.5083924787616825 0.11089648146329023 KVAEPELMGT(ph)PDGTCYPPPPVPR ddPTM_KYSE-520_SHP099_60min_R1 4 KVAEPELMGTPDGTCYPPPPVPR 23 1 F8VPD4;P27708;H7BZB3 F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KVAEPELMGT(0.992)PDGT(0.008)CYPPPPVPR;KVAEPELMGT(0.999)PDGT(0.001)CYPPPPVPR;KVAEPELMGT(0.999)PDGT(0.001)CYPPPPVPR;KVAEPELMGT(0.999)PDGT(0.001)CYPPPPVPR 174.06 1.9855999999999998e-10 3169850000.0 3596860.0 3996500.0 3187190.0 3576330.0 3924020.0 3471620.0 3123650.0 4071520.0 4923990.0 3479490.0 True False 3397335.005637352 3804502.1411312055 3392641.367084308 3916223.327937177 4232818.049380315 3449952.3318479457 3439419.0258862143 4057396.847419909 4029917.539686675 3448664.425602257 0.9851161453738889 1.1031813106799473 0.983755143555852 1.1355768044185013 1.227378929059216 1.0003734507295425 0.997319136171265 1.1765125122927398 1.168544410923052 1.0 21.717606322630605 -5.270060417657189 24.695591042902585 1.1049458229406288 1.0319339099560927 0.15042172316861113 0.08259327889591431 1085.6400727278685 3109891.8650638014 0.024147419224707586 0.03643974096509281 5.3695709142344074e-06 5.270060417657189 -0.07301191298453613 KVAGAAT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 KVAGAATPK 9 1 P16402 P16402 HIST1H1D Histone H1.3 1 KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK;KVAGAAT(1)PK 95.49799999999999 0.0038336999999999998 73981950000.0 106351330.0 88872260.0 75852860.0 59230590.0 60153120.0 84565010.0 76594420.0 77397890.0 82731060.0 102796690.0 True False 100451809.71877968 84602703.22961809 80742456.72446719 64859847.46527382 64886828.319565244 84037208.4047922 84337331.46310228 77129414.7843933 67709184.98430555 101885991.30121475 0.9859236626731631 0.8303663943308897 0.7924784918248572 0.6365923974133284 0.636857211584019 0.8248161237038507 0.8277617991051215 0.7570168754246954 0.6645583374080424 1.0 26.602380462520212 -4.327570594931779 1.9570120876912374 0.7533561751392833 1.0348126419490977 0.2836023291566637 0.10374982741998369 0.7997344629889842 3.658538057777254 0.027805717812440008 0.3868576665887132 4.703589422715273e-05 4.327570594931779 0.2814564668098144 KVAVAT(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 3 KVAVATPAK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVAVAT(1)PAK;KVAVAT(1)PAK;KVAVAT(1)PAK 89.01299999999999 0.007696 1147310000.0 1171350.0 1276830.0 931210.0 945490.0 961620.0 1148360.0 860060.0 1156180.0 1344860.0 1238100.0 True False 1106372.880471666 1215489.1702390977 991237.2865886803 1035349.0853280656 1037294.0231306424 1141192.6592774855 947003.2581767146 1152169.48143444 1100667.325161713 1227131.3972272247 0.9015928391789017 0.9905126484299617 0.8077678468894522 0.8437149335983885 0.8452998802528149 0.9299677783944549 0.7717211541620759 0.9389128858065522 0.896943332758607 1.0 20.22685830567518 -8.207393053391785 1.3805320691142633 0.9988743670562544 0.8743853773710257 0.264562844026211 0.06136187148643385 1.063296127518523 3.8596071724336207 0.058858317124186696 0.0175146426307627 6.203073778130634e-09 8.207393053391785 -0.1244889896852287 KVAVAT(ph)PAKK ddPTM_KYSE-520_SHP099_60min_R1 2 KVAVATPAKK 10 2 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVAVAT(1)PAKK;KVAVAT(1)PAKK 160.48 0.0015328 10373300000.0 7532800.0 7279300.0 6258600.0 6554400.0 5138900.0 5745400.0 5566900.0 7248200.0 7007600.0 5362500.0 True False 7114940.567735492 6929591.501547937 6662039.370114054 7177328.205347792 5543302.193658678 5709540.82745208 6129656.579708335 7223057.685942593 5735196.487220391 5314992.421961869 1.3386548846873476 1.3037820097192325 1.253442872766122 1.3503929329589708 1.0429558038038622 1.074233107814023 1.1532766358010642 1.35899679858366 1.0790601438154857 1.0 22.34163620410862 -1.0000000000000002 0.1325226809331685 1.0052679371803772 2.1379035254477037 0.40621968434946376 0.10275950683989671 97.14272467050775 0.869611993223424 0.5623794135498164 20.628964655570734 0.09999999999999995 1.0000000000000002 1.1326355882673265 KVCFLS(ph)GDR ddPTM_KYSE-520_SHP099_60min_R1 6 KVCFLSGDR 9 1 H3BMS6 H3BMS6 SQRDL 1 KVCFLS(1)GDR;KVCFLS(1)GDR;KVCFLS(1)GDR;KVCFLS(1)GDR;KVCFLS(1)GDR;KVCFLS(1)GDR 69.01 0.014859 3865670000.0 2819020.0 2430550.0 2294860.0 1829080.0 2494240.0 2643470.0 2476660.0 2449080.0 2912810.0 2483070.0 True False 2662643.3410229515 2313782.7296700687 2442790.347505827 2002915.2132670453 2690522.4977157023 2626971.123184594 2727024.9626723016 2440584.7130995695 2383917.1299646706 2461071.9315992272 1.081903908144912 0.9401524189366344 0.9925716985925231 0.813838550409834 1.0932319625324303 1.0674093225213306 1.1080638999853432 0.9916754897585034 0.9686499201246748 1.0 21.23085539446885 KVDAQSS(ph)AGEEDVLLSK ddPTM_KYSE-520_SHP099_60min_R1 2 KVDAQSSAGEEDVLLSK 17 1 Q8NFA0;K7EQL6 Q8NFA0 USP32 Ubiquitin carboxyl-terminal hydrolase 32;Ubiquitin carboxyl-terminal hydrolase 1 KVDAQS(0.037)S(0.963)AGEEDVLLSK;KVDAQS(0.047)S(0.953)AGEEDVLLSK 214.31 3.5128e-18 818500000.0 690860.0 605160.0 557000.0 613990.0 554310.0 589310.0 562950.0 585700.0 613060.0 575030.0 True False 652536.6186047344 576087.205236321 592905.1112315104 672343.4249971746 597931.0434075277 585631.8976965544 619858.479862546 583668.3434034081 501743.7579849496 569935.6815665709 1.1449302784677737 1.0107933647053673 1.0403017926545746 1.179682983085245 1.0491202125896146 1.0275403289136762 1.0875937406809717 1.0240951080639318 0.8803515452933505 1.0 19.120439591748177 -7.5598590640127705 5.568739060835296 0.9410871521157361 1.0731175377552302 0.48282348831298894 0.05617742503485548 0.15774144887931454 12.658941567479559 0.038244335255618274 0.014224225474411871 2.755122642700153e-08 7.5598590640127705 0.1320303856394941 KVDEGAGDSAAVASGGAQTLALAGS(ph)PAPSGHPK ddPTM_KYSE-520_SHP099_60min_R1 4 KVDEGAGDSAAVASGGAQTLALAGSPAPSGHPK 33 1 A0A0A0MRN5;Q9NZT2-2;Q9NZT2 A0A0A0MRN5 OGFR Opioid growth factor receptor 1 KVDEGAGDSAAVASGGAQTLALAGS(0.994)PAPS(0.006)GHPK;KVDEGAGDSAAVASGGAQTLALAGS(1)PAPSGHPK;KVDEGAGDSAAVASGGAQTLALAGS(1)PAPSGHPK;KVDEGAGDSAAVASGGAQTLALAGS(0.959)PAPS(0.041)GHPK 255.24 2.5214e-32 7405700000.0 1966320.0 2479710.0 2009500.0 4786340.0 1880510.0 1843370.0 1791340.0 1565050.0 2528910.0 1677940.0 True False 1857244.3098382605 2360581.00947941 2139035.585313681 5241232.314534409 2028495.438361729 1831864.8440666187 1972426.128993645 1559621.2068354154 2069723.692633218 1663074.757017565 1.1167533521877904 1.4194076360780685 1.2861932852313078 3.151531398344141 1.219725950263043 1.1014927839754778 1.1860117055296107 0.9377938064746557 1.2445163297078161 1.0 20.665421590116797 -5.973708571330292 24.999900710049417 1.1030249112208077 1.7499070058492834 0.2586006184940325 0.5248351324340016 323.28736582005223 307404.83567762945 0.1681137935757525 0.19061822704999654 1.0624082357443492e-06 5.973708571330292 0.6468820946284757 KVDLTLLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KVDLTLLSPK 10 1 E7EVA0;P27816-4;B5MEG9 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 KVDLTLLS(1)PK;KVDLTLLS(1)PK 114.69 0.00039685 5871000000.0 16201500.0 16079200.0 15467000.0 13999600.0 15707900.0 14721900.0 13896900.0 16261400.0 17349300.0 16904300.0 True False 15302770.49811047 15306731.096628755 16464027.568075003 15330117.774866767 16944022.364274696 14630015.161288468 15301734.272673976 16204992.998839274 14199104.460262122 16754541.053346388 0.9133506223409231 0.9135870118967859 0.9826606121679853 0.9149828530698476 1.0113092510457313 0.873197010572033 0.9132887749030736 0.9672000532418432 0.8474779711991055 1.0 23.998048832453136 -6.296574540686326 24.999353285116094 0.917748784967276 0.9454946102999634 0.06649824900445189 0.049848382327860465 1805.013488632568 1284297.367491171 0.016726217188207607 0.014752038569533532 5.051559344170881e-07 6.296574540686326 0.027745825332687435 KVDS(ph)LKK ddPTM_KYSE-520_SHP099_60min_R1 1 KVDSLKK 7 2 O95810 O95810 SDPR Serum deprivation-response protein 1 KVDS(1)LKK 100.88 0.006123 0.0 6567500.0 5653900.0 5318100.0 6327400.0 6667800.0 6820900.0 6672500.0 6336200.0 6923000.0 6016100.0 True False 6203187.683013329 5382278.15732308 5660913.235260857 6928754.193597829 7192517.925407648 6778328.233015615 7347021.41732453 6314221.201080197 5665957.714627948 5962802.034454972 1.0403142091871125 0.902642436596513 0.9493713194820649 1.1619963489583047 1.2062312120789833 1.1367689542346489 1.2321424348605063 1.0589352396062477 0.9502173109032024 1.0 22.50755900928078 -5.253815473904568 24.088636792433988 1.119706348392977 0.9579626102649548 0.3438452493692421 0.08881058381179018 372.5508083512709 1177112.6760103921 0.025197115340140356 0.04255575914633562 5.574225402348496e-06 5.253815473904568 -0.16174373812802223 KVDSSVLGSLSSVPLTGFSFS(ph)PGNSSLFGK ddPTM_KYSE-520_SHP099_60min_R1 1 KVDSSVLGSLSSVPLTGFSFSPGNSSLFGK 30 1 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 KVDSSVLGSLSSVPLT(0.003)GFS(0.099)FS(0.892)PGNS(0.003)S(0.003)LFGK 115.06 2.0826e-05 10635000.0 18198.0 21933.0 20984.0 22055.0 21050.0 26388.0 15470.0 20474.0 24798.0 15323.0 True False 17188.520663186384 20879.30575789582 22336.66221558711 24151.100568922455 22706.515241883502 26223.302703868416 17033.85857265047 20402.980472667514 20295.308306708623 15187.250141113604 1.1317730664523076 1.3747917209431602 1.470750926470832 1.590222083953348 1.4951037897515362 1.7266656215056977 1.1215893867802895 1.3434282232195767 1.3363385812528976 1.0 13.890573053410813 -8.249981833461328 0.7623975789114499 1.0037787142157732 1.4432760332208823 0.33950730803358475 0.1738388484252324 1.188832689894148 1.413032887844356 0.1813100989356227 0.0655654069518518 5.623648484206058e-09 8.249981833461328 0.439497319005109 KVDT(ph)TPNQGK ddPTM_KYSE-520_SHP099_60min_R1 2 KVDTTPNQGK 10 1 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KVDT(0.5)T(0.5)PNQGK;KVDT(0.819)T(0.181)PNQGK 125.82 0.00050659 1270100000.0 3423800.0 3374700.0 2929500.0 2598000.0 2757800.0 2944800.0 2919900.0 3048700.0 3704100.0 2933700.0 True False 3233874.9888239107 3212574.346472026 3118340.2573657245 2844913.13888282 2974823.170264437 2926420.4108819016 3215071.9874778343 3038124.7712719305 3031528.812762297 2907709.7003840604 1.112172576374034 1.10484700245272 1.072438647143435 0.9784034281369471 1.0230812140123589 1.006434861944908 1.1057059743801716 1.0448514756719505 1.0425830379015768 1.0 21.47145181013521 -4.99300677889559 4.9721431933417986 1.0320047731193582 1.1055181494713833 0.4986470360166131 0.032293728512112575 0.16075774364080767 11.519828637052019 0.009210612440786973 0.018673328134134515 1.016232830384976e-05 4.99300677889559 0.07351337635202504 KVDTT(ph)PNQGK ddPTM_KYSE-520_SHP099_60min_R1 10 KVDTTPNQGK 10 1 Q9P2E9;A2A2S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 KVDT(0.061)T(0.939)PNQGK;KVDT(0.041)T(0.959)PNQGK;KVDT(0.024)T(0.976)PNQGK;KVDT(0.175)T(0.825)PNQGK;KVDT(0.123)T(0.877)PNQGK;KVDT(0.108)T(0.892)PNQGK;KVDT(0.24)T(0.76)PNQGK;KVDT(0.097)T(0.903)PNQGK;KVDT(0.278)T(0.722)PNQGK;KVDT(0.313)T(0.687)PNQGK 247.95 8.0875e-14 33698900000.0 31918600.0 32435400.0 27696200.0 25478700.0 26353900.0 28983500.0 28440300.0 30897700.0 35235600.0 29473800.0 True False 30148011.629848365 30877154.697472043 29481541.367486816 27900187.98754949 28427801.99682063 28802603.225616556 31315323.074579895 30790523.090277378 28837703.257192608 29212685.06226945 1.032017822585811 1.0569776325474576 1.0092034095682842 0.9550709881025228 0.9731321149091303 0.9859621997848275 1.0719768829133127 1.0540120849776262 0.9871637336904316 1.0 24.800091632717205 -6.7271282049772045 24.999589864161045 1.0327893210897345 1.0014307581006816 0.11211405697245025 0.03523303583662008 389.9525004640028 284124.4039291052 0.014871632054138747 0.011518934850999805 1.8744410859985154e-07 6.7271282049772045 -0.03135856298905293 KVDWLTEK ddPTM_KYSE-520_SHP099_60min_R1 4 KVDWLTEK 8 1 P60842;P60842-2;J3KT12;J3QS69;J3KSZ0;J3QL43;Q14240-2;Q14240;E7EQG2;J3KTN0;J3QL52;I3L3H2;P38919 P60842;I3L3H2 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 0 ;;; 152.97 0.0008757 12653070000.0 18949000.0 15489800.0 10147590.0 9041030.0 15356000.0 14502500.0 11740810.0 11535680.0 10690540.0 11982700.0 False True 17897861.196104996 14745646.757336188 10801719.88811808 9900286.772915214 16564429.836311806 14411984.518070785 12927685.654063368 11495665.418527963 8749407.42258249 11876542.600399537 1.5069925481093207 1.2415773894365632 0.9095003698933982 0.8336000725145515 1.3947181762943843 1.2134831661855827 1.0885058125946914 0.9679302980095603 0.7366965047797793 1.0 23.501611576173783 -4.46099683257508 3.3737073015721624 1.0338549208554133 1.4953517885342682 0.4225823389973574 0.178386186704969 0.2761054809436089 5.723433350707262 0.049686354974102974 0.24564124070537421 3.459419008630189e-05 4.46099683257508 0.4614968676788549 KVEAPETNIDKT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 KVEAPETNIDKTPK 14 2 O75152;E9PBY7;E9PQ61 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 KVEAPETNIDKT(1)PK;KVEAPETNIDKT(1)PK;KVEAPETNIDKT(1)PK;KVEAPETNIDKT(1)PK;KVEAPETNIDKT(1)PK;KVEAPETNIDKT(1)PK;KVEAPETNIDKT(1)PK 169.43 2.0242e-08 11514110000.0 17044780.0 16046780.0 14777730.0 14119580.0 15074120.0 14335670.0 13894780.0 14172740.0 16870100.0 15146860.0 True False 16099272.075473467 15275868.602092171 15730326.121004019 15461500.637993477 16260367.483989596 14246195.765983209 15299399.962384788 14123578.072882367 13806915.10061316 15012670.604478778 1.0723789590554607 1.0175317240048465 1.0478033213032156 1.029896748242834 1.0831095887189177 0.9489448041132066 1.0190991573358352 0.9407771904799427 0.9196841431060306 1.0 23.839677305069138 -6.269971693735428 24.9474411661287 0.9653370116446478 1.0470773791894266 0.6364604143207732 0.03186707397603704 419.91564198367263 1227778.1947015345 0.011119688198475199 0.009968075040752181 5.370667999453609e-07 6.269971693735428 0.08174036754477876 KVEDLAR ddPTM_KYSE-520_SHP099_60min_R1 1 KVEDLAR 7 1 Q9NVP1;H7C452 Q9NVP1 DDX18 ATP-dependent RNA helicase DDX18 0 79.906 0.037375 221260000.0 763250.0 640860.0 505010.0 451420.0 706100.0 688310.0 524380.0 605830.0 562830.0 554000.0 False True 720911.000998846 610072.1236495292 537563.7526445689 494322.8210756275 761666.0528405679 684014.0019743693 577389.4478556219 603728.517131785 460634.25978969334 549091.9910054775 1.3129147989915857 1.1110563141385237 0.9790049052804458 0.9002550195103763 1.387137429278166 1.2457184099914251 1.0515350019917922 1.0995034111247173 0.8389018003088999 1.0 19.066688342883538 -7.64900991748181 5.732626232831343 0.9219467333936738 1.1336086203629379 0.266973036111404 0.14419507137293594 0.29851262151618624 13.490995763727799 0.10874276223603536 0.03912920683159289 2.243830683426276e-08 7.64900991748181 0.21166188696926402 KVEDLFLTFAK ddPTM_KYSE-520_SHP099_60min_R1 2 KVEDLFLTFAK 11 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 151.78 0.00074127 0.0 1230920.0 1202210.0 897630.0 871540.0 1664280.0 1278320.0 907000.0 895240.0 1001960.0 716720.0 False True 1162638.4138218146 1144454.0270460001 955492.6660587807 954370.8995619444 1795249.3675421344 1270341.5307112727 998688.4114669664 892134.6213905868 820029.3213561487 710370.4183997224 1.636665018288533 1.6110665610543775 1.3450625776496354 1.3434834486941205 2.527201754243031 1.788280448914269 1.4058699315165015 1.2558724269520278 1.154368622504663 1.0 19.43821197994718 -7.091636018979613 2.459434063370197 1.1368271532502048 1.704146453495487 0.39911963206844336 0.31537149796162833 0.35848456220319774 4.208765959640766 0.1979162408124344 0.10107057392897366 8.097742844807351e-08 7.091636018979613 0.5673193002452823 KVEDMMK ddPTM_KYSE-520_SHP099_60min_R1 2 KVEDMMK 7 1 P13639 P13639 EEF2 Elongation factor 2 0 ; 106.91 0.0088705 6490400000.0 13344300.0 13257700.0 8771000.0 8871200.0 14199900.0 13141200.0 9587900.0 11957300.0 11002600.0 11434600.0 False True 12604065.07779745 12620780.191786608 9336392.694096185 9714316.180776475 15317351.343620997 13059180.896319352 10557138.500886597 11915822.917154798 9004805.192974918 11333298.339984193 1.1121268230740875 1.1136016906270032 0.8238018989720874 0.8571481919349194 1.3515351739732249 1.1522842251709016 0.9315150968576127 1.0513993861006412 0.7945440879470819 1.0 23.43406445531137 -6.787703133672103 24.873454612456413 0.9486478615257227 1.0626173447329816 0.1359167923101835 0.15266010995021248 543.5228783746927 514745.44857168134 0.06904039025285597 0.046563471599471884 1.6304101349396998e-07 6.787703133672103 0.11396948320725897 KVEEAEPEEFVVEK ddPTM_KYSE-520_SHP099_60min_R1 5 KVEEAEPEEFVVEK 14 1 Q13185;S4R2Y4;C9JMM0;B8ZZ43 Q13185 CBX3 Chromobox protein homolog 3 0 ;;;; 177.58 2.5762999999999997e-08 1603653000.0 3626505.0 3556612.0 2544221.0 2175073.0 3436427.0 3620881.0 2626887.0 3167067.0 3077837.0 3131048.0 False True 3425335.538391516 3385747.0209365473 2708225.5565575305 2381791.283960459 3706854.2543049934 3598281.738581389 2892438.3739065374 3156081.183775995 2518979.3867568 3103309.350638485 1.103768639013309 1.091011767885774 0.8726895228799318 0.7675004373864376 1.1944842861193754 1.1594982426876221 0.932049643491532 1.0170050185704664 0.8117074716507192 1.0 21.56537608713404 -7.717931838445854 24.601711896742753 0.9058535302382681 1.014375326031483 0.10269931562808854 0.13149059561742496 257.50101139877694 145606.1403164465 0.09425116530575516 0.03562299558644419 1.9145563868137707e-08 7.717931838445854 0.10852179579321486 KVEEDLKADEPS(ph)S(ph)EES(ph)DLEIDK ddPTM_KYSE-520_SHP099_60min_R1 7 KVEEDLKADEPSSEESDLEIDK 22 2 P50502;F6VDH7;Q3KNR6 P50502 ST13 Hsc70-interacting protein 3 KVEEDLKADEPS(1)S(1)EES(1)DLEIDK;KVEEDLKADEPS(1)S(1)EES(1)DLEIDK;KVEEDLKADEPS(1)S(1)EES(1)DLEIDK;KVEEDLKADEPS(1)S(1)EES(1)DLEIDK;KVEEDLKADEPS(1)S(1)EES(1)DLEIDK;KVEEDLKADEPS(1)S(1)EES(1)DLEIDK;KVEEDLKADEPS(1)S(1)EES(1)DLEIDK 156.11 9.2139e-08 37505600000.0 43592320.0 34223000.0 29852410.0 36286370.0 35177730.0 36356230.0 38014960.0 39933910.0 38127830.0 35514280.0 True False 41174167.110464506 32578875.7102297 31776744.114144776 39735015.694905065 37946017.217095606 36129317.28291123 41857883.14705655 39795388.58685462 31204777.196377736 35199651.10889177 1.1697322505581176 0.9255454154771426 0.902757360175018 1.1288468619186858 1.0780225377719745 1.026411232632491 1.1891561941215618 1.1305620178946014 0.8865081389541134 1.0 25.069057793472798 -4.207977497524466 21.849714798119646 1.039349562878345 1.1697359512723855 0.14773164053205445 0.09846431399515221 24659.04164446472 10076601.38048481 0.025598462123269876 22.58398898131458 6.194731715443617e-05 4.207977497524466 0.1303863883940406 KVEEDLKADEPS(ph)SEES(ph)DLEIDK ddPTM_KYSE-520_SHP099_60min_R1 1 KVEEDLKADEPSSEESDLEIDK 22 2 P50502;F6VDH7;Q3KNR6 P50502 ST13 Hsc70-interacting protein 2 KVEEDLKADEPS(0.732)S(0.271)EES(0.997)DLEIDK 72.968 0.004174300000000001 1363800000.0 2196100.0 1830500.0 1508100.0 1816000.0 1654300.0 1894400.0 1945100.0 2049900.0 1906000.0 1729700.0 True False 2074277.9551831838 1742560.0323634818 1605314.539045316 1988592.0939996922 1784483.9983205663 1882576.3469080022 2141729.690346637 2042789.3753502592 1559918.446349974 1714376.203686235 1.2099316070318122 1.0164396989509341 0.936384053624627 1.159950826267794 1.0408940549242263 1.0981115713459537 1.249276375711183 1.1915642383263798 0.9099043972938102 1.0 20.709252299333375 -4.24282024149152 23.33824580784037 1.0776174026665295 1.2099318968287034 0.13766489698493878 0.10432630571319429 3679.545849152638 4611965.3599592885 0.026804551104090288 0.7963405309213145 5.717152259324658e-05 4.24282024149152 0.1323144941621739 KVEEDLKADEPSS(ph)EES(ph)DLEIDK ddPTM_KYSE-520_SHP099_60min_R1 9 KVEEDLKADEPSSEESDLEIDK 22 2 P50502;F6VDH7;Q3KNR6 P50502 ST13 Hsc70-interacting protein 2 KVEEDLKADEPS(0.182)S(0.872)EES(0.946)DLEIDK;KVEEDLKADEPS(0.028)S(0.972)EES(1)DLEIDK;KVEEDLKADEPS(0.582)S(0.65)EES(0.768)DLEIDK;KVEEDLKADEPS(0.167)S(0.833)EES(1)DLEIDK;KVEEDLKADEPS(0.026)S(0.974)EES(1)DLEIDK;KVEEDLKADEPS(0.068)S(0.932)EES(1)DLEIDK;KVEEDLKADEPS(0.033)S(0.967)EES(1)DLEIDK;KVEEDLKADEPS(0.474)S(0.581)EES(0.945)DLEIDK;KVEEDLKADEPS(0.06)S(0.94)EES(1)DLEIDK 256.87 4.6354e-36 21791410000.0 31860430.0 25223460.0 22871470.0 27314250.0 26037040.0 28036670.0 29688900.0 30002460.0 30260080.0 27062050.0 True False 30093068.435707394 24011687.12041465 24345801.551845852 29910188.107671283 28086006.9175074 27861682.742855288 32690143.7477416 29898388.46888683 24765612.266540345 26822301.290956337 1.1219420775745987 0.8952135336914829 0.9076701244890764 1.1151238584347751 1.047113989692493 1.0387506441234928 1.2187673008789786 1.1146839394786627 0.923321679146545 1.0 24.67692968663735 -5.267667905581183 24.677941996153095 1.074691671707437 0.9669690734595865 0.1581580634719093 0.09339047007079646 645.5604976903081 2557767.265522082 0.02638870899573388 0.04025463159371844 5.3992333092945315e-06 5.267667905581183 -0.10772259824785058 KVEEDLKADEPSS(ph)EESDLEIDK ddPTM_KYSE-520_SHP099_60min_R1 2 KVEEDLKADEPSSEESDLEIDK 22 2 P50502;F6VDH7;Q3KNR6 P50502 ST13 Hsc70-interacting protein 1 KVEEDLKADEPS(0.006)S(0.809)EES(0.185)DLEIDK;KVEEDLKADEPS(0.105)S(0.636)EES(0.26)DLEIDK 263.19 4.4761999999999995e-36 1583940000.0 1522380.0 1217740.0 1148020.0 1361120.0 1276100.0 1461580.0 1374870.0 1576290.0 1443220.0 1439340.0 True False 1437930.546610709 1159237.942534996 1222023.2060969465 1490480.4355643499 1376521.8099842065 1452457.7370744285 1513855.277038136 1570822.2178988503 1181167.6286155342 1426588.567389574 1.0079504206611505 0.8125944431590488 0.8566052147277832 1.0447864714713702 0.96490455724247 1.01813358825116 1.0611716031120635 1.1011038878386643 0.8279665599570026 1.0 20.44413788635756 -5.258995472742661 24.918870452425704 1.0083130691713376 0.8844044638715143 0.26800243714887095 0.08276609650877813 244.1699949148066 2489622.761204851 0.022238308942195743 0.03627549131910854 5.5081343827247166e-06 5.258995472742661 -0.12390860529982328 KVEEDLKADEPSSEES(ph)DLEIDK ddPTM_KYSE-520_SHP099_60min_R1 2 KVEEDLKADEPSSEESDLEIDK 22 2 P50502;F6VDH7;Q3KNR6 P50502 ST13 Hsc70-interacting protein 1 KVEEDLKADEPS(0.001)S(0.002)EES(0.998)DLEIDK;KVEEDLKADEPSSEES(1)DLEIDK 179.81 1.9673e-10 1730700000.0 946590.0 896910.0 777770.0 935290.0 836370.0 815520.0 935600.0 844430.0 1061050.0 839590.0 True False 894080.7657196183 853821.0973106439 827906.2986759999 1024179.6803948082 902187.5607056583 810430.0371782162 1030179.5785760689 841500.8694214439 868390.0668938289 832151.885791135 1.0744201641381932 1.026039971656025 0.9948980622556676 1.2307605112510325 1.0841621296669173 0.9738967741540744 1.237970611094232 1.0112347082184652 1.0435475563072742 1.0 19.66648735001341 -9.70942805653372 11.33196090505246 1.0000000003689193 1.0761692650537327 0.06347242651933294 0.08660448234857056 0.0 0.0 0.08271218027593723 0.02006065034134229 1.952414136280195e-10 9.70942805653372 0.07616926468481333 KVEEEGS(ph)PGDPDHEASTQGR ddPTM_KYSE-520_SHP099_60min_R1 11 KVEEEGSPGDPDHEASTQGR 20 1 A0A0A0MRN5;Q9NZT2-2;Q9NZT2 A0A0A0MRN5 OGFR Opioid growth factor receptor 1 KVEEEGS(0.999)PGDPDHEAS(0.001)TQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR;KVEEEGS(1)PGDPDHEASTQGR 205.59 4.6751e-14 21274900000.0 11605100.0 12216600.0 11111490.0 13455930.0 10590980.0 10802060.0 10190560.0 10411430.0 13013820.0 10195720.0 True False 10961341.96880669 11629696.198509546 11827754.424412604 14734777.541527111 11424429.871566916 10734640.336719306 11220721.255081391 10375315.179376042 10650838.339705255 10105393.852950132 1.0847021034817634 1.150840468737833 1.1704397271917961 1.4581101692761331 1.130527917843767 1.0622683779500068 1.1103695133867202 1.0267106191360478 1.0539755792492826 1.0 23.268622215382425 -5.995949194828621 24.99950018951349 1.060547127865362 1.2188872199831824 0.40231627188819763 0.09463089714248585 132.79183089759752 819511.2488440826 0.03097587668887954 0.03497194574642692 1.0093709586455714e-06 5.995949194828621 0.1583400921178204 KVEEEQEADEEDVS(ph)EEEAESK ddPTM_KYSE-520_SHP099_60min_R1 11 KVEEEQEADEEDVSEEEAESK 21 1 Q9H3N1 Q9H3N1 TMX1 Thioredoxin-related transmembrane protein 1 1 KVEEEQEADEEDVS(0.981)EEEAES(0.019)K;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK;KVEEEQEADEEDVS(1)EEEAESK 314.0 5.991799999999998e-54 15472290000.0 7127610.0 8100800.0 6416820.0 9556280.0 8066310.0 8130040.0 8453480.0 10140310.0 12034270.0 6677780.0 True False 6732227.26476173 7711625.408451302 6830458.484475002 10464505.97799965 8701082.705974225 8079297.40467478 9308040.256414318 10105135.631376158 9849149.92725922 6618620.064434232 1.0171647864995268 1.1651409709843348 1.032006433059831 1.5810706576483582 1.314636981918678 1.2206921270628046 1.406341528263865 1.5267737886447117 1.4880971911629342 1.0 22.658099025976053 -5.241491968796817 24.924214373968738 1.3783867250429336 1.0808077178831503 0.4020845686487444 0.16173113783152998 769.0182513751918 960884.1230862719 0.042819674355897105 0.07404287814804651 5.7346647129310495e-06 5.241491968796817 -0.29757900715978325 KVEEVLEEEEEEYVVEK ddPTM_KYSE-520_SHP099_60min_R1 2 KVEEVLEEEEEEYVVEK 17 1 P83916;K7ELA4;B5MD17;J3KS05;C9JWS9 P83916 CBX1 Chromobox protein homolog 1 0 ; 212.69 1.4365e-17 719760000.0 1048620.0 843110.0 601610.0 1208910.0 793670.0 725900.0 910810.0 1071370.0 702460.0 597340.0 False True 990450.9582278548 802605.7300660887 640390.743210034 1323804.4429279566 856127.3136354245 721369.3888410662 1002883.5634489855 1067653.667529639 574910.9715755513 592048.032323487 1.6729233172870102 1.355642931395735 1.08165335960467 2.2359747362603306 1.446043677023232 1.2184305148520784 1.693922635825979 1.8033227191713521 0.9710546107539934 1.0 19.175354699588098 -10.59585424628739 12.109451757330275 0.9999935154941386 1.5079969435487213 0.149772368746645 0.3549524815280682 6.080762410168597e-05 2.0290770335328957e-06 0.33630666278320215 0.08156530892025333 2.535979588630981e-11 10.59585424628739 0.5080034280545827 KVEGNFNPFAS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 5 KVEGNFNPFASPQK 14 1 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 KVEGNFNPFAS(1)PQK;KVEGNFNPFAS(1)PQK;KVEGNFNPFAS(1)PQK;KVEGNFNPFAS(1)PQK;KVEGNFNPFAS(1)PQK 176.11 8.647100000000002e-09 14170980000.0 10666730.0 9784760.0 8998000.0 8385250.0 9014460.0 8939000.0 8359130.0 8043220.0 10107140.0 8785670.0 True False 10075025.223300913 9314685.442375809 9578025.47730904 9182181.638882667 9723846.716738688 8883208.385246307 9204152.43764704 8015319.94712167 8271938.1562653 8707835.798947819 1.1570067989245152 1.0696900650677539 1.0999317968841773 1.0544734479251623 1.1166777763441103 1.0201396294495675 1.0569965546156934 0.9204721049161462 0.9499419083286815 1.0 23.0538827726384 -6.86068128663124 1.3785766571633762 0.952670512358556 1.0948920617430629 0.6853451657994221 0.03915677194624892 0.2352538300981644 0.8885580428851036 0.024412897432914124 0.013028201701812861 1.378220525185214e-07 6.86068128663124 0.14222154938450682 KVELS(ph)ES(ph)EEDKGGK ddPTM_KYSE-520_SHP099_60min_R1 20 KVELSESEEDKGGK 14 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK;KVELS(1)ES(1)EEDKGGK 135.38 4.3558e-06 258387911000.0 113395843.0 100079697.0 95024653.0 96897295.0 93092511.0 93201369.0 92116331.0 99660585.0 111491343.0 89597828.0 True False 107105549.53978123 95271718.13343224 101150094.17720062 106106384.78356594 100418361.99176762 92619664.68477854 101428348.7062353 99314885.69159049 91247325.57924029 88804060.94997528 1.2060884197639954 1.0728306466423905 1.1390255478764653 1.1948370789409881 1.130785697383083 1.0429665456059791 1.1421589015323463 1.1183597307282616 1.0275129831128031 1.0 26.40412231576925 -7.88176889367576 0.45581779790929405 0.991692357750892 1.1485178598019208 0.49932848998043466 0.04668074357744009 0.9901744934191141 0.5427746702809882 0.059634278025933185 0.03242004480506188 1.3128983614919246e-08 7.88176889367576 0.15682550205102874 KVELS(ph)ESEEDKGGK ddPTM_KYSE-520_SHP099_60min_R1 9 KVELSESEEDKGGK 14 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 KVELS(0.629)ES(0.371)EEDKGGK;KVELS(0.997)ES(0.003)EEDKGGK;KVELS(0.703)ES(0.297)EEDKGGK;KVELS(0.919)ES(0.081)EEDKGGK;KVELS(0.796)ES(0.204)EEDKGGK;KVELS(0.986)ES(0.014)EEDKGGK;KVELS(0.765)ES(0.235)EEDKGGK;KVELS(0.996)ES(0.004)EEDKGGK;KVELS(1)ESEEDKGGK 203.81 1.5977999999999998e-11 50880300000.0 31558180.0 26722820.0 25130150.0 24307290.0 25336260.0 25587510.0 23771200.0 24716520.0 30535070.0 24353180.0 True False 29807584.845727835 25439015.615429424 26750079.678661667 26617447.53334678 27330079.518400166 25427808.85888512 26174224.880555205 24630784.16099911 24990671.014474142 24137429.771687333 1.2349113028053826 1.0539239619153165 1.108240601078368 1.1027457266625982 1.1322696648695272 1.053459672359622 1.0843832640067166 1.0204393920139117 1.0353492998574207 1.0 24.524768725844808 -1.0000000000056 0.14290915668732593 0.9757962444269345 1.648429912194499 0.5963853643067165 0.04083943920346122 54.61351514682211 0.518585175370344 0.1644694005347858 7.536676071316555 0.09999999999871056 1.0000000000056 0.6726336677675645 KVEQNS(ph)RPVSCSGR ddPTM_KYSE-520_SHP099_60min_R1 1 KVEQNSRPVSCSGR 14 2 O00401 O00401 WASL Neural Wiskott-Aldrich syndrome protein 1 KVEQNS(0.915)RPVS(0.083)CS(0.002)GR 113.53 0.00011332 6678000000.0 959610.0 1110300.0 1017500.0 973370.0 969100.0 917650.0 1062500.0 934520.0 1247800.0 1077800.0 True False 906378.520364892 1056959.5214057232 1083089.6780575616 1065878.7921456383 1045362.6565752631 911922.6059650155 1169907.8690007196 931278.3682386087 1021230.974478224 1068251.5305157106 0.8484691989416832 0.9894294472908117 1.013890125235475 0.9977788579727783 0.9785735163614532 0.8536590680331386 1.0951614255454736 0.8717781736189261 0.9559836286733079 1.0 20.026819953336734 -4.929135906990515 0.003037988069041826 1.9139119696593143 1.8135518882089658e-05 0.02057783924472356 0.0746883847429046 494333.2674952338 294.5121276846214 91155.12270874326 94398.35580981504 1.1772375142123471e-05 4.929135906990515 -1.9138938341404321 KVEQNSRPVS(ph)CSGR ddPTM_KYSE-520_SHP099_60min_R1 6 KVEQNSRPVSCSGR 14 2 O00401 O00401 WASL Neural Wiskott-Aldrich syndrome protein 1 KVEQNS(0.263)RPVS(0.65)CS(0.087)GR;KVEQNSRPVS(0.976)CS(0.024)GR;KVEQNSRPVS(0.996)CS(0.004)GR;KVEQNS(0.002)RPVS(0.964)CS(0.034)GR;KVEQNS(0.001)RPVS(0.977)CS(0.023)GR;KVEQNSRPVS(0.994)CS(0.006)GR 158.45 7.5673e-08 18517020000.0 4367470.0 4636020.0 4837060.0 4869530.0 4862800.0 4344270.0 4625230.0 4673570.0 5463980.0 4876410.0 True False 4125197.7327644043 4413298.640392115 5148864.627169639 5332328.667122417 5245474.69445278 4317155.799504862 5092793.386294779 4657358.47648944 4471858.967726828 4833208.801189573 0.8535111770360698 0.9131197972050976 1.0653097846512187 1.1032688399081783 1.0852985894509128 0.8932276624263167 1.0537085393540864 0.9636162367624482 0.9252360391767457 1.0 22.20454989182284 -4.586907089291816 5.042264962552214 1.012804081635317 0.866276836807485 0.3927925513717885 0.06535647390564364 0.18698332917231963 9.104229665994586 0.01789435746593829 0.051671297675209504 2.588766683228613e-05 4.586907089291816 -0.14652724482783197 KVFS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 1 KVFSPIR 7 1 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 KVFS(1)PIR 96.015 0.0039875 458980000.0 581060.0 494220.0 538860.0 472630.0 489490.0 534080.0 538760.0 619130.0 666020.0 537680.0 True False 548827.4434856073 470476.929360656 573595.7778064841 517548.6130986092 528010.0781828774 530746.6086130835 593223.1185908973 616982.3825360276 545087.5569979068 532916.5735087098 1.0298562115870045 0.8828341109060417 1.0763331566701773 0.9711625399283075 0.9907931267861907 0.9959281339641226 1.1131632005458767 1.1577466590574028 1.0228384405631514 1.0 19.023550175515652 -6.732201725306033 10.8319575297103 1.0865675663713128 0.9891177503054389 0.28878265801540703 0.06185688097072975 0.5445139196589522 198.445029351058 0.022792555652322723 0.01751695488667975 1.8526708770188388e-07 6.732201725306033 -0.09744981606587388 KVFS(ph)PVIR ddPTM_KYSE-520_SHP099_60min_R1 4 KVFSPVIR 8 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 KVFS(1)PVIR;KVFS(1)PVIR;KVFS(1)PVIR;KVFS(1)PVIR 136.48 0.00045762 4700270000.0 6113130.0 5732370.0 5688430.0 5076420.0 5767680.0 5934070.0 5922400.0 6670350.0 7587440.0 6292870.0 True False 5774022.492677464 5456978.340737212 6055115.299609808 5558881.430518679 6221563.602389872 5897033.267998502 6521093.989053987 6647212.112721386 6209752.159797288 6237120.067578783 0.925751377256861 0.8749195592855699 0.9708191014447428 0.8912577231620631 0.9975058256021436 0.9454737449503194 1.0455296544556405 1.0657502245746888 0.9956120922020153 1.0 22.57244860108644 -6.221823421074453 1.1249325880752603 1.030384294934568 0.9144337106193816 0.5853772834782349 0.038078153374840745 0.3173243868340146 0.835879725004395 0.01901624349639391 0.017798367452393517 6.00034993694234e-07 6.221823421074453 -0.11595058431518646 KVGDDIAK ddPTM_KYSE-520_SHP099_60min_R1 3 KVGDDIAK 8 1 P30050 P30050 RPL12 60S ribosomal protein L12 0 ;; 85.807 0.012558 3106610000.0 4638830.0 4842940.0 3273280.0 2977360.0 4345960.0 4589020.0 3549280.0 4327690.0 4164920.0 3949480.0 False True 4381504.852621658 4610277.892998861 3484280.866233175 3260327.3992240713 4687962.326870116 4560378.223969459 3908075.8600347065 4312678.253480442 3408675.5170891574 3914490.6798489406 1.1193039429565685 1.17774654994881 0.8900981382251325 0.8328867446300541 1.197591898992853 1.1649991268201059 0.9983612632296568 1.101721425901279 0.8707839144020385 1.0 21.90039317787328 KVGLIAAR ddPTM_KYSE-520_SHP099_60min_R1 1 KVGLIAAR 8 1 E9PKU4;P62917;E9PP36 E9PKU4 RPL8 60S ribosomal protein L8 0 106.04 0.043202 0.0 423960.0 360440.0 289770.0 240210.0 399480.0 376100.0 312010.0 380870.0 332060.0 346930.0 False True 400442.0936566933 343123.92136852996 308449.03784839256 263039.48617823 430916.8032697206 373752.62039278855 343551.0157241549 379548.8508657262 271766.27455140214 343856.4701074561 1.164561753139483 0.9978696089717398 0.897028454203585 0.7649688432386614 1.2531880035151233 1.086943689836605 0.9991116805706586 1.1038002302155785 0.7903480032423832 1.0 18.391446966471957 -7.753999624348885 24.99786126782568 0.895173988722966 1.0267175636725705 0.13801965358981805 0.13739060548283274 331.2104265444353 1112907.037267589 0.10013383605412865 0.03617886736801915 1.7619775704663444e-08 7.753999624348885 0.13154357494960445 KVHPYEDS(ph)DS(ph)S(ph)EDEVDWQDTR ddPTM_KYSE-520_SHP099_60min_R1 2 KVHPYEDSDSSEDEVDWQDTR 21 1 B4E1Q4;O14730-2;O14730 B4E1Q4 RIOK3 Serine/threonine-protein kinase RIO3 3 KVHPY(0.001)EDS(0.999)DS(0.999)S(1)EDEVDWQDT(0.001)R;KVHPY(0.002)EDS(0.998)DS(1)S(1)EDEVDWQDTR 96.338 0.0026928 1969910000.0 1196390.0 1118510.0 942340.0 1040400.0 959600.0 991160.0 927530.0 991500.0 1216910.0 975280.0 True False 1130023.8617556624 1064775.1006822626 1003084.7441973098 1139279.3031923352 1035115.0606228693 984973.8027878655 1021293.784220458 988060.7179178401 995949.8198046925 966639.777956358 1.1690227192436942 1.1015221233015875 1.0377027379506383 1.1785975801667987 1.0708384697464859 1.018966760161959 1.0565401998867125 1.0221602094699327 1.030321576368708 1.0 19.882618838413695 -5.998119120074409 24.999518775888255 1.030692876926222 1.1155747829883247 0.5759731206251741 0.038614337217440974 49.482112916542334 657670.1459456234 0.011959309738178688 0.013466428810034344 1.0043402779189252e-06 5.998119120074409 0.08488190606210266 KVIQYLAYVASSHK ddPTM_KYSE-520_SHP099_60min_R1 1 KVIQYLAYVASSHK 14 1 P35579;P35579-2;Q5BKV1 P35579 MYH9 Myosin-9 0 74.53699999999999 0.030431 12617000.0 36372.0 34470.0 29932.0 35097.0 34759.0 38395.0 31447.0 33215.0 38035.0 28461.0 False True 34354.37265421561 32814.00945947514 31861.464612893316 38432.60832770218 37494.33554834343 38155.36256309788 34625.96965314413 33099.784917439276 31128.80278432384 28208.857682322927 1.2178576332689914 1.1632519767022693 1.1294843971246413 1.3624305089030941 1.329168872082305 1.3526021859087165 1.2274857083221233 1.1733826761152844 1.1035116393185498 1.0 14.783860624720875 -7.794016551558446 1.5202837782496395 1.0056005747924022 1.2570539368290716 0.567587208594416 0.07305403441364235 0.30830321370065766 1.458434122377902 0.07849268395943747 0.023805420306792766 1.606880011444421e-08 7.794016551558446 0.25145336203666946 KVIS(ph)PPPFAPS(ph)PTLPPTFHPEEFLDEDLK ddPTM_KYSE-520_SHP099_60min_R1 3 KVISPPPFAPSPTLPPTFHPEEFLDEDLK 29 1 Q5TC82-2;Q5TC82 Q5TC82-2 RC3H1 Roquin-1 2 KVIS(1)PPPFAPS(0.856)PT(0.143)LPPT(0.001)FHPEEFLDEDLK;KVIS(1)PPPFAPS(0.953)PT(0.045)LPPT(0.002)FHPEEFLDEDLK;KVIS(1)PPPFAPS(0.918)PT(0.075)LPPT(0.007)FHPEEFLDEDLK 93.146 0.0017625 631933000.0 337029.0 336711.0 319370.0 375395.0 365694.0 384758.0 396613.0 429412.0 502126.0 431740.0 True False 318333.32951934496 320534.89814648486 339957.101210067 411072.4279333775 394472.03728576517 382356.5826032665 436706.51260986575 427922.46999751404 410952.5759663837 427915.1194886374 0.7439169943323252 0.7490618665905684 0.7944498470077872 0.9606401111150569 0.9218464581414252 0.8935337060774722 1.0205447125395666 1.0000171774927826 0.9603600276089236 1.0 18.70696512892034 KVIS(ph)PPPFAPSPTLPPTFHPEEFLDEDLK ddPTM_KYSE-520_SHP099_60min_R1 2 KVISPPPFAPSPTLPPTFHPEEFLDEDLK 29 1 Q5TC82-2;Q5TC82 Q5TC82-2 RC3H1 Roquin-1 1 KVIS(1)PPPFAPSPTLPPTFHPEEFLDEDLK;KVIS(1)PPPFAPSPTLPPTFHPEEFLDEDLK 203.33 3.7393999999999997e-16 1118720000.0 685720.0 740000.0 570560.0 545800.0 510570.0 711920.0 530040.0 618540.0 795520.0 683470.0 True False 647681.7446510696 704449.2892373551 607339.210528277 597672.6678992468 550748.9542540842 707476.6432066846 583621.6158918984 616394.4291083216 651073.6214272452 677414.9875316131 0.9561077870613899 1.0399080359946722 0.8965541384629229 0.8822843882995061 0.8130156025347494 1.0443770159036652 0.8615422254215513 0.9099214520693729 0.9611148755353769 1.0 19.369680380664125 -4.909795818150884 0.0011572730209626827 1.8600302846263623 2.58615226046352e-06 0.0035838741853864153 0.07298641284463805 7447498.702409861 1689.805934342001 1349052.601102252 1366920.6107879765 1.230847312843807e-05 4.909795818150884 -1.8600276984741018 KVIS(ph)QIAMNDEK ddPTM_KYSE-520_SHP099_60min_R1 1 KVISQIAMNDEK 12 1 O95436-2;O95436 O95436-2 SLC34A2 Sodium-dependent phosphate transport protein 2B 1 KVIS(1)QIAMNDEK 54.608000000000004 0.066566 237070000.0 212080.0 185300.0 201460.0 133840.0 225770.0 266650.0 157790.0 167320.0 200500.0 254250.0 True False 200315.49962900142 176397.90985902963 214446.43394739684 146560.11335953668 243536.81454441985 264985.73844120494 173740.9530819988 166739.60597278163 164094.25419368807 251997.5428035071 0.794910527303021 0.699998531321293 0.8509862102687628 0.5815934224160895 0.966425354132582 1.0515409614443156 0.6894549492392146 0.6616715548801815 0.6511740248262625 1.0 17.943050140691852 -3.8723229865946607 18.39601647674025 0.7869152359208539 2.5874712592524434 0.0 0.15655113827185235 14539.76526878696 2134764.0581881753 0.03882495709338521 20990.500980444027 0.0001341766712553424 3.8723229865946607 1.8005560233315894 KVLS(ph)DS(ph)EDEEKDADVPGTSTR ddPTM_KYSE-520_SHP099_60min_R1 5 KVLSDSEDEEKDADVPGTSTR 21 2 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 2 KVLS(1)DS(1)EDEEKDADVPGTSTR;KVLS(1)DS(1)EDEEKDADVPGTSTR;KVLS(1)DS(1)EDEEKDADVPGTSTR;KVLS(1)DS(1)EDEEKDADVPGTSTR;KVLS(1)DS(1)EDEEKDADVPGTSTR 113.5 0.00010357 7454740000.0 9841870.0 8709590.0 8328740.0 7267840.0 8064060.0 8172160.0 8032410.0 8634450.0 10726840.0 8119390.0 True False 9295921.851818556 8291168.2230388755 8865623.906855164 7958573.3284442285 8698655.643774971 8121154.518131164 8844404.391567126 8604499.108245783 8779116.257631034 8047458.521389824 1.155137591217198 1.0302840581285733 1.1016675492381462 0.988954874050069 1.0809195997288201 1.0091576733878724 1.0990307521385854 1.0692194418120164 1.0909178636083048 1.0 22.940101805035898 -9.985838918236928 0.00633100669148796 1.6421401987465732e-06 2.0695229348339774 0.13773153087570122 0.04720343138707688 33176.03871587489 40.331395934816754 6840.095081315975 6348.614364455792 1.0331445326268642e-10 9.985838918236928 2.0695212926937785 KVLS(ph)PTAAKPSPFEGK ddPTM_KYSE-520_SHP099_60min_R1 1 KVLSPTAAKPSPFEGK 16 2 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 KVLS(0.958)PT(0.042)AAKPSPFEGK 228.68 1.1493999999999998e-18 4252700000.0 3622200.0 3433200.0 3728100.0 2914900.0 3405400.0 3565500.0 3438900.0 3741800.0 4647900.0 4482300.0 True False 3421269.345323317 3268263.918661738 3968419.2911709095 3191931.219603356 3673385.605924471 3543246.39194493 3786537.5724297226 3728820.5691426867 3803958.524024151 4442590.309176632 0.7701068762195626 0.7356662872808233 0.8932669940268242 0.718484261987897 0.8268567097750857 0.7975631659363202 0.8523265277485155 0.8393347821068308 0.8562478777677697 1.0 22.08296967304622 -13.99999997217538 0.1325375319178436 1.6720422533632016 0.730099166582089 0.656299779255835 0.045468499727501055 83.44790439515762 0.6917506072803318 14.709244302912552 0.3124256054740546 1.0000000640685593e-14 13.99999997217538 -0.9419430867811126 KVLT(ph)PIKEK ddPTM_KYSE-520_SHP099_60min_R1 1 KVLTPIKEK 9 2 D6REX9;Q8N960-2;Q8N960 D6REX9 CEP120 Centrosomal protein of 120 kDa 1 KVLT(1)PIKEK 80.69 0.008062699999999999 463250000.0 1032200.0 934390.0 846900.0 649910.0 753470.0 909310.0 702840.0 855560.0 1054600.0 872580.0 True False 974941.8083603139 889500.5018520167 901492.5290879116 711677.2509974341 812763.8023421366 903634.658998581 773889.9262573797 852592.2620492043 863111.2243025615 864849.6200569667 1.127296336553973 1.0285030844939567 1.0423691103992523 0.8228913264141305 0.9397747116875658 1.0448459917679789 0.8948260001622067 0.9858271799819315 0.997989944478104 1.0 19.722089773360974 -4.625296676316064 1.8577808325503666 0.9564787733892582 1.120165106375642 0.39710878624035795 0.06295848314041252 0.44933513373558037 2.607940859312252 0.01788444266899304 0.10025549111092905 2.36975432019786e-05 4.625296676316064 0.1636863329863837 KVMDS(ph)DEDDDY ddPTM_KYSE-520_SHP099_60min_R1 8 KVMDSDEDDDY 11 1 K7EQA1;O14737 K7EQA1 PDCD5 Programmed cell death protein 5 1 KVMDS(1)DEDDDY;KVMDS(1)DEDDDY;KVMDS(1)DEDDDY;KVMDS(1)DEDDDY;KVMDS(1)DEDDDY;KVMDS(1)DEDDDY;KVMDS(0.987)DEDDDY(0.013);KVMDS(1)DEDDDY 91.939 0.0028853999999999998 39105380000.0 18554980.0 16825900.0 15507920.0 14912430.0 16502000.0 16074550.0 15460630.0 15916020.0 18907100.0 14978070.0 True False 17525698.27096438 16017558.507809188 16507585.336749315 16329702.863614425 17800613.51646373 15974222.77089842 17023541.361608118 15860811.041447012 15474047.249204397 14845375.952562118 1.1805493055189131 1.0789594388847235 1.1119681569196178 1.0999858080923934 1.1990678830462072 1.0760402984702775 1.146723492621962 1.0684007661462855 1.0423479539117888 1.0 23.823510293610816 -7.69312023913037 1.5473656671141809 1.0029104754131763 1.1256769412081864 0.5594123566553344 0.038684830283463555 0.2742332794064874 1.2497904727361617 0.0344381054844796 0.01064430599864744 2.027121411307946e-08 7.69312023913037 0.12276646579501005 KVMDSDEDDDY(ph) ddPTM_KYSE-520_SHP099_60min_R1 2 KVMDSDEDDDY 11 1 K7EQA1;O14737 K7EQA1 PDCD5 Programmed cell death protein 5 1 KVMDSDEDDDY(1);KVMDSDEDDDY(1) 148.94 3.377e-05 24607000000.0 4926300.0 4484900.0 4242000.0 4100950.0 4278200.0 4308600.0 4234100.0 4508500.0 5021600.0 4057400.0 True False 4653028.318664418 4269438.672027851 4515446.107439972 4490703.055004425 4614870.00037178 4281708.42920598 4662124.148833829 4492861.065791807 4109804.024234532 4021454.5926094367 1.1570510648598835 1.0616652690482085 1.1228390134600512 1.1166862516009421 1.1475623792577225 1.064716343453146 1.1593128907639052 1.1172228760331433 1.021969521124884 1.0 21.939285999576665 -7.807821198168916 4.391629439050114 1.0030009156218727 1.117425222428795 0.6456908475741888 0.03196548623147561 0.12064378936241144 4.6583650928969575 0.028158910380871024 0.007683537175661643 1.556606364549682e-08 7.807821198168916 0.1144243068069224 KVNEEKDGPIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KVNEEKDGPISPK 13 2 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 KVNEEKDGPIS(1)PK;KVNEEKDGPIS(1)PK 115.57 9.787399999999999e-05 3515000000.0 3140500.0 2777700.0 3080800.0 2381130.0 2606400.0 2519000.0 2384050.0 2328540.0 3631000.0 2625800.0 True False 2966290.20456846 2644255.122587298 3279393.297454286 2607431.8792871633 2811508.8516125986 2503277.9866243917 2625053.0400858046 2320462.838225321 2971701.930061255 2602537.4548414852 1.139768497490896 1.0160296128181385 1.260075351212967 1.0018806355453493 1.0802952504611856 0.9618605034742376 1.0086513971979285 0.8916155400217497 1.1418479009910176 1.0 21.31148749577883 KVNQQPNTSDKK ddPTM_KYSE-520_SHP099_60min_R1 1 KVNQQPNTSDKK 12 2 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 0 62.14 0.023118 2016200000.0 1381900.0 1185500.0 947820.0 872660.0 1317500.0 1444900.0 882940.0 1290700.0 1178100.0 1079700.0 False True 1305243.2522506465 1128546.800528221 1008917.9937656188 955597.3440252042 1421179.7544504274 1435881.8431415595 972196.1918639968 1286222.8629516454 964186.7374842087 1070134.6979938892 1.219699963656444 1.0545838786872654 0.9427953281553908 0.8929692176289578 1.3280381966070431 1.3417767369222886 0.9084802069183522 1.201926136366611 0.900995677732631 1.0 20.029360969592872 -7.772575989884177 24.994043905390264 0.9504977978071291 1.1046484229362545 0.1430265244380856 0.1567566755685665 531.3812918326935 1192546.3621836898 0.15283922480802972 0.0409366166565806 1.6882004438517066e-08 7.772575989884177 0.15415062512912547 KVNT(ph)SPRRK ddPTM_KYSE-520_SHP099_60min_R1 1 KVNTSPRRK 9 3 H0Y448;Q8WZ74 H0Y448 CTTNBP2 Cortactin-binding protein 2 1 KVNT(0.859)S(0.141)PRRK 69.26100000000001 0.026907 2235700000.0 794410.0 7735600.0 4188000.0 2667500.0 6164800.0 2823600.0 4226200.0 4574400.0 8343700.0 1682600.0 True False 750342.4936829257 7363970.164627682 4457965.181036924 2921018.39798688 6649934.687086146 2805976.8650387633 4653425.539737268 4558532.474072985 6828694.407560473 1667693.4730429903 0.4499283026597197 4.415661681034745 2.6731322350879076 1.7515319482884257 3.9875041754239224 1.682549527473284 2.7903362428146354 2.7334354590686067 4.094693969809907 1.0 20.66942271088888 -6.949126823460812 24.99936091899283 2.8008431958994606 2.590902533958306 0.0 1.2775778842891212 1029.3571091474848 505828.4812932171 0.5076549934306941 0.3422608465136688 1.1242766127332017e-07 6.949126823460812 -0.2099406619411548 KVNVTVDYIRPAS(ph)PATETVPAFSER ddPTM_KYSE-520_SHP099_60min_R1 1 KVNVTVDYIRPASPATETVPAFSER 25 2 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 KVNVT(0.002)VDY(0.023)IRPAS(0.943)PAT(0.022)ET(0.01)VPAFSER 53.998000000000005 0.039527 450550000.0 434720.0 399360.0 394240.0 307150.0 319900.0 364650.0 289540.0 359000.0 459110.0 315990.0 True False 410605.215007165 380174.1461484189 419653.3412063028 336341.443651985 345074.3100179828 362374.08408995083 318809.52883808804 357754.7127912303 375747.19722126774 313190.5744364998 1.3110395028520128 1.2138748007740578 1.3399296641073999 1.0739194315063243 1.1018029857343217 1.157040197464254 1.0179410073617254 1.1422908030834307 1.199739800271197 1.0 18.256681269382693 -5.2671820383099535 24.997839472652494 1.1040532324316659 1.2808406727204573 0.6437037772367877 0.06439647858323382 293.06689062710427 1275723.9679108232 0.017527979208568686 0.02680557937981043 5.405277085641885e-06 5.2671820383099535 0.17678744028879145 KVPCS(ph)PDFQR ddPTM_KYSE-520_SHP099_60min_R1 7 KVPCSPDFQR 10 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 KVPCS(1)PDFQR;KVPCS(1)PDFQR;KVPCS(1)PDFQR;KVPCS(1)PDFQR;KVPCS(1)PDFQR;KVPCS(1)PDFQR;KVPCS(1)PDFQR 136.24 0.00018148 5841140000.0 8037430.0 7153040.0 7108540.0 6520400.0 6996780.0 6742690.0 6373460.0 6921710.0 8486330.0 6828480.0 True False 7591577.735680525 6809397.221468063 7566767.862466142 7140096.85557025 7547386.779767483 6700606.370636137 7017751.535775361 6897700.203549267 6945426.394970185 6767984.97967705 1.1216895070654802 1.006118843631504 1.1180237375212387 1.0549811911537303 1.1151600960154056 0.9900445096667267 1.036904123878571 1.0191660035094237 1.0262177613907177 1.0 22.690294935983946 -6.266419915427992 24.99955496542008 1.0170667075622042 1.0792802167453135 0.4929490706530244 0.034688829738608706 396.80563872083803 1991738.0481454623 0.011249693337063714 0.010246980850051707 5.414770878868716e-07 6.266419915427992 0.062213509183109306 KVPILVAQEGESSQQLNDSSVIISALK ddPTM_KYSE-520_SHP099_60min_R1 1 KVPILVAQEGESSQQLNDSSVIISALK 27 1 Q9H7Z7;X6RJ95 Q9H7Z7 PTGES2 Prostaglandin E synthase 2;Prostaglandin E synthase 2 truncated form 0 209.16 9.0592e-22 227190000.0 102510.0 59619.0 67084.0 78481.0 47213.0 64710.0 61313.0 55566.0 61524.0 35558.0 False True 96823.56595138129 56754.81375005659 71408.34197819507 85939.81064382706 50928.39449477653 64306.120887044286 67511.1163972152 55373.2545152019 50352.7924938278 35242.98378370539 2.7473146583050583 1.6103861721349826 2.026171859239987 2.438494174365604 1.4450647767889417 1.8246502986723911 1.915590257951683 1.5711851997277184 1.4287323911861411 1.0 15.105048452154124 -3.6785829457539436 0.074430131057753 1.1417238399740582e-11 4.66238038856101 0.5734011145343446 0.3174531683599751 97.75761944395339 0.972539869674186 15.587755774203659 54.78906613346919 0.000209612440397929 3.6785829457539436 4.662380388549592 KVPLDER ddPTM_KYSE-520_SHP099_60min_R1 3 KVPLDER 7 1 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 0 ;; 85.212 0.020995 1391780000.0 4900400.0 4823300.0 3036420.0 2939860.0 4530300.0 4568500.0 3135830.0 3907870.0 3901700.0 3990100.0 False True 4628565.043294787 4591581.428079104 3232152.491643777 3219263.4104988645 4886808.836118993 4539986.296900969 3452830.2991515575 3894314.511073712 3193249.6338529307 3954750.818250824 1.1703809559718328 1.1610292630547956 0.8172834750365763 0.8140243364113484 1.2356805929634818 1.1479828959006304 0.8730841607559829 0.9847180492641396 0.807446481613043 1.0 21.91515536526141 -6.777471039297919 24.980766083894306 0.9150386615047628 1.0485073882209832 0.1870937980714542 0.14363156672078037 501.25493571468974 781055.3630704526 0.06525981904919385 0.04415289321381434 1.6692791185111342e-07 6.777471039297919 0.13346872671622045 KVPS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 2 KVPSVK 6 1 Q7L4E1;Q7L4E1-3;Q7L4E1-2 Q7L4E1 FAM73B Protein FAM73B 1 KVPS(1)VK;KVPS(1)VK 57.858999999999995 0.043054 1146410000.0 1946210.0 2211600.0 1754420.0 1946150.0 2258600.0 2221300.0 2054000.0 1926660.0 2587500.0 1956580.0 True False 1838249.8516265494 2105351.4163207207 1867512.7203712505 2131111.510868666 2436338.9703238984 2207436.042750601 2261638.3651082176 1919976.8661458245 2117675.225566922 1939246.2233962042 0.9479197790609695 1.0856545140686757 0.9630095950893092 1.0989380745764445 1.2563329715074216 1.1382959090593023 1.1662461103816966 0.9900634808422454 1.0920094622426209 1.0 20.88706456138181 -5.370058661762172 6.3261919460943 1.1166891048251795 1.008106442236701 0.26514678083377263 0.08028181223056444 0.3273674030645526 16.434677905373913 0.02343610878977211 0.03494593632473852 4.265219030193009e-06 5.370058661762172 -0.10858266258847848 KVPVQEIDDDFFPS(ph)S(ph)GEEAEAASVGEGGGGGR ddPTM_KYSE-520_SHP099_60min_R1 2 KVPVQEIDDDFFPSSGEEAEAASVGEGGGGGR 32 1 Q03468;P0DP91 Q03468 ERCC6 DNA excision repair protein ERCC-6 2 KVPVQEIDDDFFPS(1)S(1)GEEAEAASVGEGGGGGR;KVPVQEIDDDFFPS(1)S(1)GEEAEAASVGEGGGGGR 153.77 3.5933e-07 323500000.0 390440.0 393850.0 330070.0 337049.0 374270.0 364650.0 326040.0 347470.0 432340.0 366480.0 True False 368781.5148771565 374928.8548190977 351346.8403306726 369082.03562252334 403722.91969499976 362374.08408995083 358999.3050437594 346264.70767010807 353837.9544044845 363233.2723171254 1.01527459895025 1.0321985440027677 0.9672760374879007 1.016101948117494 1.1114700950152065 0.9976346103381618 0.9883436689421186 0.9532846632171881 0.974134203475616 1.0 18.470536834577633 -6.515489551401217 23.654240828259642 0.9776107227112424 1.0275822400820247 0.31111279937805947 0.034926945044974 228.2947492796197 730824.291159936 0.013789592359106713 0.011157343664247477 3.051479443154314e-07 6.515489551401217 0.049971517370782315 KVQIPVSRPDPEPVS(ph)DNEEDS(ph)YDEEIHDPR ddPTM_KYSE-520_SHP099_60min_R1 2 KVQIPVSRPDPEPVSDNEEDSYDEEIHDPR 30 2 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 KVQIPVS(0.001)RPDPEPVS(0.999)DNEEDS(0.689)Y(0.311)DEEIHDPR;KVQIPVS(0.001)RPDPEPVS(0.999)DNEEDS(0.764)Y(0.236)DEEIHDPR 125.42 8.2244e-05 23880000000.0 4080750.0 4016100.0 4118110.0 3847760.0 3709620.0 3969500.0 3197870.0 3585250.0 5426550.0 3574750.0 True False 3854382.6627265513 3823160.527711002 4383569.959808971 4213449.953528767 4001545.98914945 3944724.87808874 3521141.9078036067 3572813.6045536394 4441225.312193311 3543080.496113419 1.0878620079206822 1.0790498640673891 1.2372199741489154 1.1892052574449579 1.1293974250765526 1.1133602192826002 0.9938080468863527 1.0083918805888932 1.2534926364402703 1.0 21.75657281209466 -6.530729140363432 24.23911710187242 1.0630455419577394 1.1458218263332014 0.17887018021376122 0.08145491363720647 231.296237662973 714145.3744655341 0.031630888278551254 0.024554111723215536 2.9462585756843316e-07 6.530729140363432 0.08277628437546203 KVQIPVSRPDPEPVS(ph)DNEEDSY(ph)DEEIHDPR ddPTM_KYSE-520_SHP099_60min_R1 5 KVQIPVSRPDPEPVSDNEEDSYDEEIHDPR 30 2 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 KVQIPVSRPDPEPVS(1)DNEEDS(0.384)Y(0.616)DEEIHDPR;KVQIPVSRPDPEPVS(1)DNEEDS(0.35)Y(0.65)DEEIHDPR;KVQIPVS(0.002)RPDPEPVS(0.997)DNEEDS(0.341)Y(0.661)DEEIHDPR;KVQIPVS(0.001)RPDPEPVS(0.997)DNEEDS(0.438)Y(0.563)DEEIHDPR;KVQIPVS(0.001)RPDPEPVS(0.998)DNEEDS(0.372)Y(0.628)DEEIHDPR 140.39 1.3606e-06 34137100000.0 11285300.0 10882700.0 9546600.0 9631800.0 9242400.0 9017100.0 8627740.0 9269800.0 11977100.0 8777000.0 True False 10659281.912312197 10359878.756734261 10161989.111100074 10547203.37609373 9969724.2979375 8960820.934176587 9499916.157828033 9237645.227387583 9802360.558120811 8699242.608402668 1.2253114888434438 1.1908943367929032 1.1681464201589835 1.212427776862563 1.146045092282823 1.030069091936953 1.092039455096009 1.0618907464961223 1.1268062059394266 1.0 23.052458368829573 -6.043938949206637 4.166539710126489 1.0683905115894636 1.1954940833685892 0.7737151638700903 0.03497583399718909 0.10512019768493856 3.9139807407027534 0.011197068722702081 0.011668119713742752 9.037765128568547e-07 6.043938949206637 0.12710357177912557 KVQIPVSRPDPEPVS(ph)DNEEDSYDEEIHDPR ddPTM_KYSE-520_SHP099_60min_R1 3 KVQIPVSRPDPEPVSDNEEDSYDEEIHDPR 30 2 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 KVQIPVSRPDPEPVS(0.998)DNEEDS(0.001)YDEEIHDPR;KVQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR;KVQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR 188.99 1.6199000000000002e-15 3521360000.0 1645610.0 1729800.0 1791810.0 1502790.0 1563860.0 1580200.0 1506000.0 1462990.0 2286630.0 1593350.0 True False 1554324.7328577929 1646697.8115172673 1907312.9395973661 1645614.7097697097 1686926.8848537751 1570337.3856545715 1658241.1771436105 1457915.2291544343 1871435.6332514372 1579234.158607544 0.9842268952871976 1.0427192209223792 1.2077454943598096 1.0420333810539506 1.0681930071352985 0.9943664003818047 1.0500286915055899 0.9231786313689668 1.1850273267274916 1.0 20.59079366985469 -6.003386590213115 2.9373820244695206 1.0271028754360387 1.0769191647957335 0.04551602767121388 0.08148698009517573 0.7837909899018392 13.781580192270422 0.027480161800601994 0.029788964183447945 9.922324127014003e-07 6.003386590213115 0.04981628935969473 KVS(ph)IIETK ddPTM_KYSE-520_SHP099_60min_R1 1 KVSIIETK 8 1 Q9HC62;H7C1A0;Q9HC62-2 Q9HC62 SENP2 Sentrin-specific protease 2 1 KVS(1)IIETK 64.22399999999999 0.019469 585580000.0 438290.0 445710.0 390260.0 368090.0 484720.0 509240.0 353160.0 420460.0 454230.0 422850.0 True False 413977.17999054637 424297.4225756511 415416.78403807734 403073.1629297063 522864.7063204645 506061.64426701324 388860.8593094538 419001.5223961016 371753.2822064787 419103.8779723224 0.9877674766299476 1.0123920223035294 0.9912024342220748 0.961750019779882 1.2475778292726618 1.207484995642139 0.927838847950565 0.9997557751631505 0.8870194282264057 1.0 18.676948345238568 KVS(ph)IVSKPVLYR ddPTM_KYSE-520_SHP099_60min_R1 2 KVSIVSKPVLYR 12 2 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 KVS(1)IVSKPVLYR;KVS(0.999)IVS(0.001)KPVLYR 77.191 0.010697 6902500000.0 3264100.0 3083000.0 2712200.0 2784800.0 2281900.0 2692300.0 3035300.0 3461000.0 3560800.0 2985600.0 True False 3083033.8661779715 2934888.052322654 2887032.7516734316 3049466.554719352 2461472.547765036 2675496.357042022 3342137.7456733026 3448994.5988034722 2914248.480463262 2959149.9067616505 1.0418647122720097 0.9918010728744907 0.9756290970851353 1.0305211465466242 0.8318174561351479 0.9041435687082021 1.1294249534423808 1.1655356124144058 0.9848262414162295 1.0 21.496751352798746 -6.764825810219913 24.999996335035284 1.0837413416512904 0.9616863590871835 0.3165637395477655 0.07617041987823271 101.75129669128137 751156.4454278629 0.03225032388419341 0.02274754049931996 1.7185975557187571e-07 6.764825810219913 -0.12205498256410696 KVS(ph)KQEEASGGPTAPK ddPTM_KYSE-520_SHP099_60min_R1 1 KVSKQEEASGGPTAPK 16 2 P50552;K7EM16 P50552 VASP Vasodilator-stimulated phosphoprotein 1 KVS(1)KQEEASGGPTAPK 155.16 2.4236e-06 1010500000.0 717650.0 590970.0 594190.0 410130.0 417300.0 588930.0 494310.0 453450.0 673320.0 527660.0 True False 677840.5239001927 562578.9141359455 632492.438137614 449108.6318899197 450139.13588779 585254.2694175084 544279.6788007015 451877.0877860253 551062.0610159311 522985.3429132683 1.2960985103794878 1.0757068467772402 1.2093884593674098 0.858740379583448 0.8607108057375155 1.1190643817231543 1.0407168884864229 0.8640339426509788 1.0536854779643776 1.0 18.996410988781587 -5.246830565762877 24.775708527453233 0.9698075678665137 1.1819288530497194 0.5200674763461426 0.09785232220489799 615.9023335638439 1044532.9266916475 0.02703800392846091 0.04656425502507182 5.664602428917391e-06 5.246830565762877 0.21212128518320572 KVS(ph)LFGK ddPTM_KYSE-520_SHP099_60min_R1 1 KVSLFGK 7 1 O14777;I3L4G3 O14777 NDC80 Kinetochore protein NDC80 homolog 1 KVS(1)LFGK 64.906 0.036997 880560000.0 1141200.0 952040.0 1039600.0 950140.0 927120.0 989340.0 949950.0 929550.0 1101600.0 1097200.0 True False 1077895.3610741997 906302.569358826 1106614.2794188133 1040441.019929993 1000079.0694087897 983165.1620829595 1045980.2166185736 926325.6080086008 901577.2090761448 1087479.661608684 0.9911866852568934 0.83339725914336 1.0175953799281394 0.9567452676686312 0.9196301362817171 0.9040768271735634 0.9618388771255535 0.8518095930532699 0.8290520189981871 1.0 20.052556988795267 -7.258682586873633 24.97911289718392 0.8803231045430027 0.9378790834076669 0.09153283253393307 0.06346870630766789 467.2501314189961 4233769.130417173 0.030002440204552176 0.016321391024771766 5.512104127791481e-08 7.258682586873633 0.05755597886466424 KVS(ph)LSSDTTR ddPTM_KYSE-520_SHP099_60min_R1 1 KVSLSSDTTR 10 1 Q96B01-2;Q96B01 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 KVS(1)LSSDTTR 110.92 0.00043632 333260000.0 421010.0 326940.0 334140.0 280850.0 306630.0 316490.0 299340.0 341350.0 425560.0 324310.0 True False 397655.7360373719 311233.31165305513 355679.1990429031 307541.8995593684 330760.03651395463 314514.66851399513 329600.20847687125 340165.93652168935 348289.03149459296 321436.86570936185 1.237119255626783 0.9682564287273364 1.1065289547854869 0.9567723318875406 1.0290046718319568 0.9784648310949321 1.0253964110479181 1.0582667167656556 1.0835379156836056 1.0 18.2941758761505 -4.252059211589834 24.890567846613155 1.0241599594521205 1.2371193751437253 0.6540343104888289 0.046729769783687015 732.1006157398314 1942610.1282784613 0.011223762950145726 0.13962335455733302 5.5968128950046506e-05 4.252059211589834 0.21295941569160481 KVS(ph)LVLEK ddPTM_KYSE-520_SHP099_60min_R1 5 KVSLVLEK 8 1 Q9P2M7-2;Q9P2M7;H0Y4A8 Q9P2M7-2 CGN Cingulin 1 KVS(1)LVLEK;KVS(1)LVLEK;KVS(1)LVLEK;KVS(1)LVLEK;KVS(1)LVLEK 138.45 0.00069833 4653908000.0 7397880.0 6220760.0 5241550.0 5357340.0 5734200.0 5017900.0 5247030.0 5632410.0 6834100.0 5194040.0 True False 6987504.849091848 5921905.352048877 5579428.69977653 5866499.9828569945 6185448.916865006 4986581.424804502 5777450.9984779805 5612872.484324379 5593199.713641314 5148024.846501968 1.3573176232511366 1.150325712991217 1.0837998778439653 1.1395632612074946 1.2015188545696234 0.9686397353332191 1.1222655621803577 1.0902963081342294 1.0864748870514558 1.0 22.295587585943913 KVS(ph)PASGVSK ddPTM_KYSE-520_SHP099_60min_R1 1 KVSPASGVSK 10 1 Q9UNY4;Q9UNY4-2 Q9UNY4 TTF2 Transcription termination factor 2 1 KVS(0.974)PAS(0.023)GVS(0.002)K 105.66 0.0013530999999999999 605270000.0 1236900.0 1164500.0 1046800.0 969610.0 966090.0 988950.0 884580.0 950750.0 1374200.0 1009800.0 True False 1168286.6913009798 1108555.6720498647 1114278.4029392202 1061761.442876123 1042115.7866998205 982777.596217625 974001.9790688541 947452.0701567173 1124679.9207629238 1000853.9576125114 1.1672898752260232 1.1076098202122022 1.1133276683016544 1.0608555172314085 1.0412266232985052 0.9819390618807097 0.9731709323429051 0.9466436765827637 1.1237203112487992 1.0 19.932800043998093 -5.399813671823898 1.1483174200976887 1.0004154432850731 1.1449375655109753 0.5797213960083293 0.046027747526258884 0.36826914776923786 0.9598181541899776 0.017265557170850467 0.0392126610374703 3.982780096983842e-06 5.399813671823898 0.1445221222259021 KVS(ph)PDPQK ddPTM_KYSE-520_SHP099_60min_R1 1 KVSPDPQK 8 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 KVS(1)PDPQK 44.765 0.0655 0.0 1395900.0 1349100.0 1123100.0 1115900.0 1341800.0 1301500.0 1109700.0 1120400.0 1428600.0 1201000.0 True False 1318466.6443423398 1284287.2109596157 1195496.8230235355 1221954.8004924296 1447392.026202343 1293376.8557330882 1221879.305628329 1116513.5939033271 1169202.2520753264 1190360.0743638617 1.1076200157729075 1.0789064910850183 1.0043152897768508 1.0265421588047234 1.2159279006193493 1.0865425374958746 1.0264787369328658 0.9379629054679117 0.9822256956158059 1.0 20.182966612539985 -6.970513046624549 3.6256557179121085 0.9707499734722559 1.0852364617192427 0.46532883958798077 0.05459529397668123 0.2226876098470932 6.22892039019356 0.027785175825628075 0.017047430117850315 1.070254230960482e-07 6.970513046624549 0.11448648824698682 KVS(ph)PIKINLK ddPTM_KYSE-520_SHP099_60min_R1 2 KVSPIKINLK 10 2 Q9H4I2;H0Y6F5;Q9H4I2-2 Q9H4I2 ZHX3 Zinc fingers and homeoboxes protein 3 1 KVS(1)PIKINLK;KVS(1)PIKINLK 95.65100000000001 0.0021244 13232600000.0 6199600.0 5722900.0 5892100.0 5055600.0 5022100.0 5148700.0 4826600.0 4633200.0 6240500.0 4162900.0 True False 5855695.829403801 5447963.293751974 6271914.193693319 5536082.703978433 5417310.698159768 5116565.053486707 5314519.8310765885 4617128.510597008 5107382.510203042 4126019.944687191 1.4192117119898564 1.3203918950433005 1.5200881909863906 1.3417488955929282 1.3129627996915743 1.2400727873540642 1.2880499615421763 1.119027191456548 1.237847266535754 1.0 21.976319364380796 -7.2385797554973275 0.321420977088454 0.9816569779292111 1.4619739694771854 0.7773173294648869 0.06526827426766764 0.6457221942521497 0.21695471239712444 0.10275434501727142 0.10730508354190113 5.773248408395259e-08 7.2385797554973275 0.48031699154797425 KVS(ph)PPLMAPPCIWTFAK ddPTM_KYSE-520_SHP099_60min_R1 1 KVSPPLMAPPCIWTFAK 17 1 Q6PL24 Q6PL24 TMED8 Protein TMED8 1 KVS(1)PPLMAPPCIWTFAK 107.74 0.00020275 136730000.0 147260.0 180430.0 136540.0 109140.0 143780.0 162180.0 108390.0 117090.0 170650.0 98039.0 True False 139091.1942444679 171761.87196904854 145341.58687172417 119512.6327858625 155094.66800370603 161167.7744623836 119347.11898445936 116683.84211901142 139664.26173642348 97170.45073318778 1.4314145215440728 1.7676348177150594 1.4957385272484274 1.2299277391850558 1.596109381334121 1.658608900610338 1.2282244044762602 1.2008161044699055 1.4373120705173623 1.0 16.568230040479722 -8.472257184050884 0.22595706041025723 0.8331442315203895 1.6405512563412048 0.4595862413342262 0.1660045832223262 4.720849013195727 0.6016117553028895 1.1762988133172072 0.4906723158754731 3.3708763023701656e-09 8.472257184050884 0.8074070248208153 KVS(ph)PWETSTSSFFPILAPAVGSYLPPTAR ddPTM_KYSE-520_SHP099_60min_R1 1 KVSPWETSTSSFFPILAPAVGSYLPPTAR 29 1 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 KVS(0.377)PWET(0.125)S(0.125)T(0.125)S(0.125)S(0.125)FFPILAPAVGSYLPPTAR 54.425 0.037864 3182300.0 5109.1 6756.3 6807.3 7122.3 6128.4 8250.5 6044.6 8374.6 8202.8 5984.6 True False 4825.688038261654 6431.717206586946 7246.109450065097 7799.201250602421 6610.67021417382 8199.005569132421 6655.647157611065 8345.550467246338 6713.3782957605235 5931.581099948347 0.8135584689727459 1.0843175029071008 1.221615169373339 1.3148604257759093 1.1144870318356408 1.382263081457964 1.1220696548630218 1.4069689559363878 1.1318024962718598 1.0 12.53420100005971 -4.3312868085912655 2.0774473440595624 1.2300084506219464 0.7325095890761258 0.49071432295736983 0.12232695966743092 0.431512843043843 2.3225837780484793 0.02980877460324014 0.38212143798119114 4.6635129964531877e-05 4.3312868085912655 -0.49749886154582057 KVS(ph)TSGQIR ddPTM_KYSE-520_SHP099_60min_R1 1 KVSTSGQIR 9 1 A0A087WZ02;C9JY42;A0A096LNI6;Q86XP1-2;Q16760;Q86XP1 A0A087WZ02 DGKH;DGKD Diacylglycerol kinase eta;Diacylglycerol kinase delta 1 KVS(0.963)T(0.023)S(0.015)GQIR 55.258 0.042164 470390000.0 1335700.0 1192100.0 1059400.0 1014000.0 1108300.0 1056000.0 1005300.0 1105500.0 1211300.0 1196100.0 True False 1261606.0583480643 1134829.726621419 1127690.6190999327 1110370.2551297839 1195516.9046356047 1049409.1122966884 1106925.5347825165 1101665.27852564 991358.454388102 1185503.4845517187 1.064194306290987 0.9572554964277804 0.9512334917567559 0.9366233584287225 1.0084465547460388 0.8852012043587603 0.9337176560059498 0.9292805064526817 0.836234112599821 1.0 20.177068472665475 -1.0000000000542006 0.6927547636703711 0.9259506323247801 16.477459072755078 0.4019574557299034 0.047055801857588335 278.72846158031655 1.520939961088249 0.018206765337830586 6705.167262214277 0.09999999998751984 1.0000000000542006 15.551508440430299 KVS(ph)VNVK ddPTM_KYSE-520_SHP099_60min_R1 2 KVSVNVK 7 1 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 KVS(1)VNVK;KVS(1)VNVK 97.47200000000001 0.0061122 2650000000.0 2570200.0 2281100.0 2348400.0 2145000.0 2338800.0 2248700.0 2226600.0 2482800.0 2926800.0 2494900.0 True False 2427625.882433325 2171512.5319990967 2499781.6215728503 2348860.155082235 2522850.2540483233 2234665.0291870874 2451686.457521884 2474187.7462898754 2395366.8986238744 2472797.127002831 0.981732733317975 0.8781604072110403 1.010912538790728 0.949879846362158 1.0202415016173039 0.9036992985735255 0.99146283807498 1.0005623669131036 0.9686871892831717 1.0 21.237712452451625 -1.0000002658401557 0.128122834347981 1.0089119663007486 0.7899157848943117 0.08605210286168075 0.042608716535862935 194.69694500264333 1.6967657029393728 0.23098990913535059 7.684439396484459 0.09999993878806078 1.0000002658401557 -0.21899618140643695 KVS(ph)VSESNVLLDEEVLTDPK ddPTM_KYSE-520_SHP099_60min_R1 9 KVSVSESNVLLDEEVLTDPK 20 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 KVS(0.496)VS(0.496)ES(0.009)NVLLDEEVLTDPK;KVS(0.497)VS(0.497)ES(0.007)NVLLDEEVLTDPK;KVS(0.659)VS(0.17)ES(0.17)NVLLDEEVLTDPK;KVS(0.949)VS(0.025)ES(0.025)NVLLDEEVLTDPK;KVS(0.938)VS(0.035)ES(0.027)NVLLDEEVLTDPK;KVS(0.944)VS(0.034)ES(0.022)NVLLDEEVLTDPK;KVS(0.978)VS(0.021)ESNVLLDEEVLTDPK;KVS(0.333)VS(0.333)ES(0.333)NVLLDEEVLTDPK;KVS(0.477)VS(0.261)ES(0.261)NVLLDEEVLTDPK 264.0 1.7425e-35 7187507900.0 5366095.0 5722532.0 4367526.0 4094511.0 4215631.0 5817974.0 4750556.0 5904751.0 6680598.0 5987332.0 True False 5068427.013304828 5447612.973024351 4649063.714248675 4483652.094380377 4547377.176040693 5781661.866198117 5230788.561438668 5884268.79696025 5467569.807370796 5934288.896553809 0.8540917204499753 0.917989175786153 0.7834238937960205 0.7555500199837164 0.7662884728583857 0.974280485325828 0.8814516200039264 0.9915710036256228 0.9213521455866349 1.0 22.500643731983295 -6.267853230570988 24.96046719513201 0.9486867783697707 0.8160551624681007 0.6182126898512772 0.054253676202093634 390.1211340064744 1518210.3500448244 0.020311353809496595 0.018330749658098576 5.396929804562122e-07 6.267853230570988 -0.13263161590166994 KVSGTLDT(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 4 KVSGTLDTPEK 11 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 KVSGT(0.001)LDT(0.999)PEK;KVSGTLDT(1)PEK;KVSGTLDT(1)PEK;KVSGTLDT(1)PEK 211.82 1.5314e-09 8328000000.0 7563490.0 6405470.0 5811220.0 5450740.0 5737000.0 6346300.0 5841680.0 6464780.0 7231590.0 6540110.0 True False 7143928.132256489 6097741.60639351 6185820.539480755 5968776.690775257 6188469.260935181 6306690.387659545 6432214.023702701 6442355.187070988 5918515.549548796 6482169.713528581 1.1020890300583752 0.9406945322130718 0.9542824104976252 0.9207992006624186 0.9546910269904791 0.9729289213914282 0.9922933690363551 0.9938578395479991 0.9130454479148529 1.0 22.62804536252865 -4.25671258807932 24.964931355599713 0.9598947180855284 1.10208908896509 0.6899413948125086 0.028516712058658876 282.6876828466035 1492987.034371186 0.007221032759194264 0.05721521145445321 5.537164322092785e-05 4.25671258807932 0.14219437087956166 KVSGTLDT(ph)PEKTVDSQGPTPVCTPTFLER ddPTM_KYSE-520_SHP099_60min_R1 1 KVSGTLDTPEKTVDSQGPTPVCTPTFLER 29 2 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 KVS(0.084)GT(0.084)LDT(0.708)PEKT(0.117)VDS(0.006)QGPTPVCTPTFLER 61.022 0.030157 206710000.0 204300.0 209870.0 176400.0 136190.0 145480.0 167910.0 119080.0 127090.0 236460.0 156510.0 True False 192967.07173804712 199787.5301787075 187771.02624997942 149133.45665298332 156928.44833202913 166862.0114069481 131117.76850880537 126649.15445302903 193524.82467151879 155123.44316293753 1.2439581523171817 1.28792609360054 1.2104619548236157 0.9613856784776078 1.0116359276991786 1.07567243225565 0.8452479253640777 0.8164410992347567 1.2475536948225514 1.0 17.243057205808526 -5.183236224476875 4.042577372393356 0.9838606127013654 1.262020412765851 0.5132511493062857 0.11334770580211867 0.17946387987002696 5.555256159121281 0.03161366586668979 0.056840839607229986 6.557884682483452e-06 5.183236224476875 0.2781598000644856 KVSS(ph)TPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 KVSSTPPVR 9 1 Q9H6A9-2;Q9H6A9 Q9H6A9-2 PCNXL3 Pecanex-like protein 3 1 KVS(0.207)S(0.396)T(0.396)PPVR 88.338 0.0026497 0.0 191880.0 206190.0 155520.0 197690.0 182320.0 203270.0 193140.0 213950.0 246790.0 169890.0 True False 181236.0338967031 196284.3229025004 165545.0680407981 216478.3981623342 196667.54674110207 202001.31653082202 212664.47606475194 213207.8573863052 201979.15706962722 168384.90677242 1.076319946785088 1.1656883426481195 0.9831348379967327 1.2856164029886286 1.1679642226301634 1.1996402789463556 1.26296637947591 1.266193398642703 1.1995086789020313 1.0 17.361403302268364 -5.268559874586135 24.996299198643847 1.2101013466565926 1.0841117713660338 0.2870247359348559 0.08642633235015122 632.9876675421478 2222085.8455729648 0.02280435767095043 0.03463353717178041 5.388155557294474e-06 5.268559874586135 -0.12598957529055888 KVST(ph)SGQIR ddPTM_KYSE-520_SHP099_60min_R1 5 KVSTSGQIR 9 1 A0A087WZ02;C9JY42;A0A096LNI6;Q86XP1-2;Q16760;Q86XP1 A0A087WZ02 DGKH;DGKD Diacylglycerol kinase eta;Diacylglycerol kinase delta 1 KVS(0.068)T(0.779)S(0.154)GQIR;KVS(0.313)T(0.668)S(0.019)GQIR;KVS(0.086)T(0.827)S(0.086)GQIR;KVS(0.023)T(0.889)S(0.088)GQIR;KVS(0.195)T(0.579)S(0.227)GQIR 142.97 0.00067453 7298600000.0 4773790.0 3989580.0 3697990.0 3322340.0 3345340.0 3122590.0 3345790.0 3453260.0 3825490.0 3721480.0 True False 4508978.352385564 3797914.588318335 3936368.352393201 3638094.1947020525 3608599.2256191266 3103100.757544048 3684015.1049636886 3441281.4470569403 3130877.4487551707 3688510.582467625 1.222438773476161 1.0296607542271217 1.0671972505931537 0.9863315051866155 0.9783350609787224 0.8412882891793316 0.9987812214704481 0.9329731798558952 0.8488188873950862 1.0 21.81460694412848 -1.0000000220019953 0.4719898170623301 0.9215393728887393 8.603197338237837 0.6973504492749969 0.05695508173820979 51.460277537268716 0.5898715818032035 0.032677189130814584 385.98615014764283 0.09999999493385348 1.0000000220019953 7.681657965349098 KVSVS(ph)ESNVLLDEEVLTDPK ddPTM_KYSE-520_SHP099_60min_R1 2 KVSVSESNVLLDEEVLTDPK 20 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 KVS(0.261)VS(0.589)ES(0.151)NVLLDEEVLTDPK;KVS(0.413)VS(0.573)ES(0.014)NVLLDEEVLTDPK 159.1 6.544300000000001e-09 1106860000.0 838390.0 863470.0 595630.0 625570.0 572450.0 823490.0 663260.0 842140.0 985300.0 1032260.0 True False 791882.8354109703 821987.6051051072 634025.2628416958 685023.9847155208 617498.5582050465 818350.2934518951 730308.7935938041 839218.8128969542 806394.3573917261 1023114.9794861287 0.7739920256164196 0.803416645818205 0.6197008894935174 0.6695474100668353 0.6035475685393564 0.7998615110326319 0.7138091106442506 0.8202585532649141 0.7881756924297473 1.0 19.96453685616023 -8.216554515252152 0.6898796411331634 1.0005487226763996 0.7020294916051685 0.6226048194871379 0.06734224798810133 0.689934809156987 0.6971409941014628 0.07292399867329001 0.02766139680731841 6.073590187259683e-09 8.216554515252152 -0.29851923107123113 KVTAEADSS(ph)SPTGILATSESK ddPTM_KYSE-520_SHP099_60min_R1 1 KVTAEADSSSPTGILATSESK 21 1 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 KVT(0.003)AEADS(0.012)S(0.453)S(0.453)PT(0.079)GILATSESK 63.184 0.0141 1150100000.0 643310.0 588210.0 568370.0 604600.0 478870.0 640760.0 680850.0 621230.0 821270.0 552840.0 True False 607624.3118933083 559951.5086787905 605008.0396241541 662061.0022203821 516554.3446024109 636760.7791621468 749676.9624556619 619075.0981261721 672148.0705319209 547942.2677030123 1.10892031461724 1.0219169822874246 1.1041455921266357 1.2082678071099686 0.9427167332204899 1.1620946524739986 1.3681677918338484 1.1298181115345425 1.226676805477304 1.0 19.063664370384995 -6.510426858724818 24.845561223170936 1.2024334714419567 1.0798521975096531 0.1705707809789817 0.10695617000778632 828.6151007605704 1653362.7577336954 0.037304703356786546 0.031275697664437906 3.0872595396626424e-07 6.510426858724818 -0.12258127393230356 KVTAEADSSS(ph)PTGILATSESK ddPTM_KYSE-520_SHP099_60min_R1 3 KVTAEADSSSPTGILATSESK 21 1 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 KVTAEADS(0.008)S(0.163)S(0.623)PT(0.205)GILATSESK;KVTAEADS(0.008)S(0.039)S(0.915)PT(0.039)GILATSESK;KVT(0.001)AEADS(0.028)S(0.199)S(0.768)PT(0.004)GILATSESK 184.0 3.0958000000000003e-13 4131640000.0 1827650.0 1826680.0 1467340.0 1514640.0 1253100.0 1640240.0 1501720.0 1685190.0 2035410.0 1639500.0 True False 1726266.6111700495 1738923.55089742 1561927.084227011 1658590.9302068802 1351711.840836306 1630002.6537438633 1653528.5129748355 1679344.469216304 1665830.8525105957 1624975.3055116995 1.062334058440632 1.0701230627931533 0.9612005049733142 1.0206868526439516 0.8318353123591969 1.0030937997735176 1.0175714716194684 1.0334584553501776 1.0251422571532747 1.0 20.631986363227412 -10.00271342014455 13.850387880928245 1.000001716265562 1.000420787789267 0.0 0.0640824439261993 0.0 0.0 0.0652805773149477 0.015832865621813505 9.937715966459094e-11 10.00271342014455 0.0004190715237051279 KVTFFEPGS(ph)GDENGTSNKEDEFR ddPTM_KYSE-520_SHP099_60min_R1 6 KVTFFEPGSGDENGTSNKEDEFR 23 2 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 KVTFFEPGS(1)GDENGTSNKEDEFR;KVTFFEPGS(1)GDENGTSNKEDEFR;KVTFFEPGS(0.998)GDENGT(0.001)S(0.001)NKEDEFR;KVTFFEPGS(1)GDENGTSNKEDEFR;KVTFFEPGS(1)GDENGTSNKEDEFR;KVTFFEPGS(1)GDENGTSNKEDEFR 241.15 1.5885999999999999e-28 8363350000.0 3292450.0 3265920.0 3127860.0 2969970.0 2856020.0 2797920.0 2709180.0 2725900.0 4175820.0 2875870.0 True False 3109811.235163645 3109020.300954138 3329486.8603529455 3252235.0558459596 3080772.5254690787 2780457.1434442755 2983050.353448817 2716444.489129841 3417596.3518557926 2850392.029193004 1.0910117637552077 1.090734281148813 1.1680803293908948 1.1409781610870995 1.0808241441586193 0.9754648185118142 1.0465403786206107 0.9530073271706818 1.198991688460262 1.0 21.44272892357607 -6.006286982273472 6.402302055994372 1.0319421465621645 1.1224793311560415 0.2853196997520496 0.06556600021166469 0.18601462869572935 35.680546338449105 0.020378902992165264 0.021839230307785285 9.856279663434553e-07 6.006286982273472 0.09053718459387694 KVTGTEGSSSTLVDYTSTSSTGGS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 KVTGTEGSSSTLVDYTSTSSTGGSPVR 27 1 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 KVTGTEGSSSTLVDYTSTSST(0.001)GGS(0.999)PVR 200.15 6.9237e-16 602630000.0 544140.0 511650.0 410630.0 459550.0 424420.0 493600.0 411000.0 488710.0 578310.0 571690.0 True False 513955.469483803 487069.565997693 437099.8668312299 503225.49383125425 457819.4393805319 490519.25930837676 452547.8909734545 487014.77907577116 473303.48200873705 566625.2713680896 0.907046500490319 0.859597322268537 0.7714090580109023 0.8881098660076356 0.8079756807795543 0.865685461087963 0.7986722686773206 0.8595006324018999 0.8353024581236351 1.0 19.11203542148353 -10.320103154821844 4.474097959712237 1.0001433843300407 0.8420837656695018 0.5847860954435085 0.03948986037781482 5.376232042599907e-05 8.169850887412205e-06 0.03639609742743673 0.00881936198657488 4.785164202848432e-11 10.320103154821844 -0.15805961866053886 KVTS(ph)PLQS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 5 KVTSPLQSPTK 11 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GUM1;A0A1B0GUN0;H0YDE2;A0A1B0GTN9;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 2 KVT(0.09)S(0.91)PLQS(0.999)PT(0.001)K;KVT(0.328)S(0.672)PLQS(0.999)PT(0.001)K;KVT(0.084)S(0.911)PLQS(0.895)PT(0.11)K;KVT(0.082)S(0.918)PLQS(1)PTK;KVT(0.098)S(0.902)PLQS(0.966)PT(0.034)K 196.37 5.9378e-07 5917190000.0 8945320.0 8333170.0 7489340.0 7145190.0 8105610.0 7784220.0 7744370.0 8009090.0 9841310.0 7809810.0 True False 8449105.267546687 7932832.004856822 7972114.839767684 7824266.709320295 8743475.392387811 7735635.795570207 8527246.497367632 7981308.33612566 8054376.183236329 7740621.159340244 1.0915280690815812 1.024831449771269 1.0299063441631047 1.0108060513824682 1.1295573329845074 0.9993559478409532 1.1016230250563552 1.0310940390739818 1.040533571846168 1.0 22.884017911862145 -8.183825410128517 1.6245768388241812 1.0003496942488637 1.0520504744524608 0.13592761753983573 0.040130470217305814 1.4180569469233917 7.142061202067848 0.03640175038511589 0.010468293682223871 6.548993959746723e-09 8.183825410128517 0.05170078020359714 KVTVS(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 6 KVTVSAR 7 1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 KVT(0.018)VS(0.982)AR;KVT(0.008)VS(0.992)AR;KVT(0.002)VS(0.998)AR;KVT(0.087)VS(0.913)AR;KVTVS(1)AR;KVTVS(1)AR 92.538 0.0045053 1939830000.0 3785260.0 3625340.0 3656780.0 3296870.0 3311490.0 3100600.0 3474810.0 3352060.0 4159160.0 3483140.0 True False 3575284.08207127 3451173.2246537185 3892501.889854874 3610203.533559892 3572085.4231992797 3081248.0052908286 3826077.705677548 3340432.4862366836 3403961.3878913685 3452282.089441915 1.0356291836653588 0.9996788023807244 1.1275155937457368 1.0457440730584986 1.0347026490459046 0.8925249807117973 1.1082749342467724 0.9676012561235073 0.9860032580482558 1.0 21.719118922720405 -6.015506820884403 24.794634216872367 0.9925731743842692 1.0520840196423125 0.20689029615824073 0.05732856378045277 1065.3480445394373 1703439.0405313743 0.018338796014463407 0.018918032653582873 9.649241569093278e-07 6.015506820884403 0.05951084525804329 KVVDYSQFQES(ph)DDADEDYGR ddPTM_KYSE-520_SHP099_60min_R1 170 KVVDYSQFQESDDADEDYGR 20 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(0.999)DDADEDYGR;KVVDYSQFQES(0.917)DDADEDY(0.083)GR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYS(0.001)QFQES(0.999)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDY(0.003)S(0.014)QFQES(0.981)DDADEDY(0.002)GR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(0.999)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDY(0.001)S(0.001)QFQES(0.985)DDADEDY(0.013)GR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYS(0.001)QFQES(0.999)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(0.997)DDADEDY(0.002)GR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYS(0.001)QFQES(0.999)DDADEDYGR;KVVDYS(0.001)QFQES(0.999)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDY(0.001)S(0.001)QFQES(0.997)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(0.999)DDADEDY(0.001)GR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(0.999)DDADEDYGR;KVVDYS(0.001)QFQES(0.999)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDY(0.001)S(0.001)QFQES(0.999)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR;KVVDYSQFQES(1)DDADEDYGR 321.49 5.5195e-54 670941354500.0 112159246.7 106401693.8 106321930.39999999 98989798.69999999 99365301.19999999 97820474.2 95152783.5 101501480.10000001 128291202.5 100431603.39999999 True False 105937549.70163578 101289996.71764956 113175612.1546875 108397759.40607964 107184785.09321366 97209940.33585533 104771755.457856 101149395.15615664 104996754.0840346 99541857.52848108 1.064251284152747 1.0175618501861723 1.1369650412873349 1.0889666126138413 1.0767810422117727 0.9765735013337626 1.0525396859093024 1.01614936336923 1.0548000277570946 1.0 26.568799973289195 -6.162481529381488 11.741758822198195 1.023065171411326 1.077689977452392 0.4001970400423145 0.03471915363696361 0.7777938848867606 89.1038621810032 0.011587863234997475 0.011589629093074972 6.878891677305101e-07 6.162481529381488 0.05462480604106612 KVVDYSQFQES(ph)DDADEDYGRDS(ph)GPPTKK ddPTM_KYSE-520_SHP099_60min_R1 1 KVVDYSQFQESDDADEDYGRDSGPPTKK 28 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 KVVDYS(0.001)QFQES(0.999)DDADEDYGRDS(0.954)GPPT(0.046)KK 103.94 0.0019568 748420000.0 328530.0 311420.0 317440.0 263740.0 232220.0 203400.0 195630.0 227150.0 383170.0 256330.0 True False 310305.78599168145 296458.9157490501 337902.69032195833 288805.77030367777 250494.3928489398 202130.50515260073 215406.18956480996 226362.06966720865 313595.9869296532 254059.1156217224 1.221392057641052 1.1668895053167794 1.3300160062946673 1.1367660223366711 0.9859689239488253 0.7956042224974127 0.8478585349621379 0.8909818847210629 1.234342590551159 1.0 17.95480470328931 -5.691967005986358 3.109521231796666 0.9366533956415624 1.2321389170521402 0.5380284774271802 0.11757113682309933 0.19083554958288987 3.7252270668628267 0.03804245921295976 0.04938801780430819 2.0325114180607917e-06 5.691967005986358 0.2954855214105778 KVVDYSQFQES(ph)DDADEDYGRDSGPPTK ddPTM_KYSE-520_SHP099_60min_R1 14 KVVDYSQFQESDDADEDYGRDSGPPTK 27 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYS(0.008)QFQES(0.992)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYS(0.002)QFQES(0.998)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYS(0.001)QFQES(0.999)DDADEDYGRDSGPPTK;KVVDYS(0.003)QFQES(0.997)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK;KVVDYSQFQES(1)DDADEDYGRDSGPPTK 284.48 5.781599999999999e-52 38983810000.0 10003600.0 11404360.0 11252190.0 6759490.0 7817870.0 7651114.0 5626110.0 5693324.0 13127210.0 6659983.0 True False 9448680.3663178 10856477.427306656 11977524.171540564 7401909.897285231 8433091.891404461 7603360.559489368 6194852.104342257 5673575.187875809 10743639.574034538 6600980.732008373 1.431405536528964 1.6446764303769648 1.8145067616181871 1.1213348739821534 1.2775513569539934 1.1518531666999756 0.9384745018726103 0.8595048854429246 1.6275823260531992 1.0 22.654248956233367 -5.274248636231536 24.415773221049385 1.131511933394166 1.6316442531105935 0.5179771924244401 0.21683668566796116 424.14856211074414 808470.456764795 0.060940285979003604 0.09109219442649862 5.318037112390964e-06 5.274248636231536 0.5001323197164276 KVVDYSQFQES(ph)DDADEDYGRDSGPPTKK ddPTM_KYSE-520_SHP099_60min_R1 1 KVVDYSQFQESDDADEDYGRDSGPPTKK 28 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 KVVDYSQFQES(1)DDADEDYGRDSGPPTKK 260.16 4.1591999999999993e-41 2803500000.0 1693600.0 2384700.0 2501900.0 1098200.0 1175800.0 1195800.0 801180.0 887620.0 2469900.0 910910.0 True False 1599652.6318921032 2270135.4324923237 2663176.477181539 1202572.5978141315 1268328.7706131418 1188336.5686405136 882171.0931632905 884541.0533920659 2021428.4211121711 902840.0460772554 1.771800706938538 2.5144381248437333 2.9497766395639617 1.3319885433075132 1.4048211265371937 1.3162204908872954 0.9771067388916018 0.9797317445491074 2.23896628189574 1.0 19.784110886094314 -5.281350825040251 23.63441218599357 1.309349176405931 2.422248347644836 0.5680964727555291 0.43571315853401693 270.76808269461446 321394.64148780715 0.12227032035176023 0.18169751217084104 5.23177640583971e-06 5.281350825040251 1.1128991712389051 KVVEAVNS(ph)DS(ph)DSEFGIPK ddPTM_KYSE-520_SHP099_60min_R1 9 KVVEAVNSDSDSEFGIPK 18 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KVVEAVNS(0.999)DS(0.795)DS(0.206)EFGIPK;KVVEAVNS(1)DS(0.999)DS(0.001)EFGIPK;KVVEAVNS(1)DS(0.999)DS(0.001)EFGIPK;KVVEAVNS(1)DS(0.923)DS(0.077)EFGIPK;KVVEAVNS(1)DS(0.996)DS(0.004)EFGIPK;KVVEAVNS(1)DS(0.996)DS(0.004)EFGIPK;KVVEAVNS(1)DS(0.965)DS(0.035)EFGIPK;KVVEAVNS(1)DS(0.999)DS(0.001)EFGIPK;KVVEAVNS(1)DS(0.995)DS(0.005)EFGIPK 174.4 7.9082e-09 10594190000.0 4238940.0 4424300.0 3870780.0 3940440.0 4285890.0 3834110.0 3852050.0 4182700.0 5003790.0 4175670.0 True False 4003797.5480826036 4211749.986990312 4120296.67226698 4314938.232863517 4623165.159621662 3810179.89729911 4241452.806385156 4168191.189949521 4095227.8712809677 4138676.812422106 0.9674100514602477 1.017656168355277 0.9955589332078411 1.042588834168536 1.1170635855753173 0.9206275507821671 1.0248330562209087 1.007131355953871 0.9895017313237101 1.0 21.980738162825816 -9.384639153576629 14.180565193511413 1.0000000000442966 1.0109580276008394 0.0019753057362533744 0.048233233675706116 0.0 0.0 0.046399020825926424 0.011253415517089898 4.124400648046408e-10 9.384639153576629 0.010958027556542849 KVVEAVNS(ph)DSDS(ph)EFGIPK ddPTM_KYSE-520_SHP099_60min_R1 1 KVVEAVNSDSDSEFGIPK 18 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 KVVEAVNS(0.963)DS(0.453)DS(0.584)EFGIPK 85.945 0.0034385999999999996 369680000.0 393560.0 372350.0 360330.0 366420.0 385840.0 351670.0 316430.0 328930.0 419070.0 405210.0 True False 371728.4422575903 354461.7470912554 383557.44834838476 401244.4466318099 416203.4128707049 349475.09708463674 348417.8324591977 327789.0186028395 342977.45189500717 401620.1546486096 0.9255721804669577 0.8825795792080838 0.955025398772558 0.9990645190176564 1.0363110716763073 0.870163245144915 0.8675307462197452 0.8161667555992868 0.8539846616888268 1.0 18.615472144826086 -6.365682412224767 12.67394420895182 0.869090361467091 0.9573427671297914 0.29383288819210085 0.058949287882701026 0.994564794920671 116.96622432772439 0.02143459900718123 0.018900742002867853 4.308415580670513e-07 6.365682412224767 0.08825240566270043 KVVGDVAYDEAK ddPTM_KYSE-520_SHP099_60min_R1 1 KVVGDVAYDEAK 12 1 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 0 130.2 0.00016819 566530000.0 902550.0 811090.0 568950.0 587130.0 870480.0 830650.0 599170.0 733970.0 781890.0 738120.0 False True 852483.7523111813 772124.0189290891 605625.427352187 642930.658672929 938981.8236463073 825465.6052360269 659739.950935681 731424.0293798861 639918.4858429066 731580.83104867 1.165262560377922 1.0554186033309583 0.8278311864514892 0.8788238173918976 1.2834970297135075 1.1283313752942101 0.9018004886623258 0.9997856673355436 0.8747064694486708 1.0 19.48065774838439 -6.7746206011158066 24.99455178420668 0.9440552925287935 1.048321115633431 0.15313308096168798 0.12868978697831512 559.1212650804533 1060209.5295757938 0.05889585696225473 0.03997603511716857 1.6802712591124398e-07 6.7746206011158066 0.10426582310463761 KVVGSMPTAGSAGS(ph)VPENLNLFPEPGSK ddPTM_KYSE-520_SHP099_60min_R1 1 KVVGSMPTAGSAGSVPENLNLFPEPGSK 28 1 A0A087WV97;Q8WU79-3;Q8WU79-2;Q8WU79 A0A087WV97 SMAP2 Stromal membrane-associated protein 2 1 KVVGSMPTAGS(0.001)AGS(0.999)VPENLNLFPEPGSK 104.14 6.088600000000001e-07 0.0 174320.0 182440.0 138490.0 124280.0 138230.0 163970.0 117980.0 164330.0 161070.0 146960.0 True False 164650.12210169528 173675.30855197707 147417.28699183464 136091.5338338556 149107.91457888647 162946.60240841692 129906.56977383999 163759.9775849103 131823.74824427595 145658.0487331499 1.1303880803960202 1.19234954787947 1.0120778650681208 0.9343220990360755 1.023684690792864 1.1186927452731446 0.8918598793797718 1.1242768869224913 0.9050220663451368 1.0 17.152225898170975 -4.770463013440423 24.213643436451957 1.004380141965576 1.1613688143099465 0.41696507129952187 0.0756665631956992 104.25050425047438 279745.4245957875 0.018613676216881002 0.039709836620154024 1.6964340724081885e-05 4.770463013440423 0.15698867234437053 KVVNPLFEK ddPTM_KYSE-520_SHP099_60min_R1 1 KVVNPLFEK 9 1 P62424;Q5T8U3 P62424 RPL7A 60S ribosomal protein L7a 0 152.54 0.030069 0.0 4439200.0 3660500.0 2725600.0 2563200.0 4261400.0 3806300.0 2845200.0 3236100.0 3250900.0 3197100.0 False True 4192948.7266741903 3484644.085477481 2901296.537114193 2806805.7573458212 4596747.9359507095 3782543.4698247067 3132820.5824760953 3224874.724411416 2660618.5085200043 3168776.181306164 1.3232076002748367 1.099681355229424 0.9155889754000499 0.88576964630833 1.4506382505235629 1.1936922185099073 0.9886531592094814 1.0177035359695643 0.8396359844586128 1.0 21.59549433143527 -6.874058195536116 5.478175983858424 0.9575264931305657 1.1339796807645064 0.2300121542866349 0.16422480088071198 0.3826538874263614 16.86194268014587 0.07567729107506961 0.05063763856175925 1.336416424514188e-07 6.874058195536116 0.1764531876339407 KVVT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 3 KVVTSPR 7 1 A0A075B754;Q96QE3 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 KVVT(0.634)S(0.366)PR;KVVT(0.948)S(0.052)PR;KVVT(0.5)S(0.5)PR 87.913 0.014205 1469000000.0 4311210.0 3803810.0 3560320.0 3308420.0 3354650.0 3783750.0 3596460.0 3570910.0 4139480.0 3884610.0 True False 4072058.587115933 3621069.257964787 3789823.923913415 3622851.242087255 3618641.8696524687 3760134.2127392064 3960025.2748671295 3558523.3466666564 3387854.7797989435 3850195.3775808467 1.0576238834078304 0.9404897421699093 0.9843198986682685 0.940952571701326 0.9398592836933206 0.976608676700914 1.0285257984376084 0.9242448753087815 0.879917626914715 1.0 21.87650022633045 -4.255365894271748 24.492520938388257 0.9574770783772453 1.057623942397085 0.36282214661481405 0.039918089795633015 595.5143944857847 2401437.282660052 0.010173910982329757 0.08986719897015313 5.554361036731066e-05 4.255365894271748 0.10014686401983974 KVVTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 KVVTSPR 7 1 A0A075B754;Q96QE3 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 KVVT(0.361)S(0.639)PR;KVVT(0.018)S(0.982)PR 65.305 0.022481 1121920000.0 3669300.0 3396100.0 3267800.0 2761800.0 3053800.0 3145200.0 3093700.0 3182600.0 3737000.0 3302600.0 True False 3465756.6144317985 3232946.2583499774 3478447.616664865 3024280.6416345523 3294116.686254817 3125569.6401472944 3406441.387602381 3171560.3034244273 3058455.0021038 3273341.53338392 1.058782464061721 0.9876593155275849 1.0626595426077983 0.9239123418044639 1.006346772146755 0.9548559501874339 1.0406617680620893 0.9689060157880094 0.9343525479732101 1.0 21.642332707244055 -1.000036927017441 0.5487570286704252 0.9781751958373724 4.344776201595337 0.24476554884295865 0.04071403534296997 196.26703733934661 1.808286866753238 0.019474758534190815 778.2835781135658 0.09999149760148557 1.000036927017441 3.366601005757965 KVVVS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 12 KVVVSPTK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVVVS(0.999)PT(0.001)K;KVVVS(0.818)PT(0.182)K;KVVVS(0.999)PT(0.001)K;KVVVS(0.984)PT(0.016)K;KVVVS(0.996)PT(0.004)K;KVVVS(0.988)PT(0.012)K;KVVVS(0.795)PT(0.205)K;KVVVS(0.5)PT(0.5)K;KVVVS(0.598)PT(0.402)K;KVVVS(0.621)PT(0.379)K;KVVVS(0.775)PT(0.225)K;KVVVS(0.662)PT(0.338)K 151.79 0.00014083 227247650000.0 227027940.0 199579090.0 185293170.0 171543200.0 173422670.0 189918320.0 175217850.0 195589270.0 209706560.0 182899850.0 True False 214434247.59922186 189991010.94207865 197237464.21775416 187846614.15165612 187070047.4889852 188732969.3182563 192930580.2394237 194910816.47324893 171629134.97617903 181279499.62293023 1.182892980426662 1.0480556893485957 1.0880296151965183 1.0362264599272715 1.0319426514200425 1.0411158995409278 1.0642713635062335 1.0751950268986425 0.9467652731454775 1.0 27.43364054317384 -1.0000000418136719 0.8666982187173351 1.0338434647469428 57.56010265718343 0.5851706833168532 0.037378483065389184 562.170605144813 1.435473717383417 0.012361355467082655 62728.28935499959 0.09999999037204671 1.0000000418136719 56.526259192436484 KVVVS(ph)PTKK ddPTM_KYSE-520_SHP099_60min_R1 3 KVVVSPTKK 9 2 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVVVS(0.938)PT(0.062)KK;KVVVS(0.852)PT(0.148)KK;KVVVS(0.759)PT(0.241)KK 90.926 0.0031622 0.0 2036070.0 1906070.0 1732210.0 1926820.0 1858530.0 1854670.0 1804150.0 1941550.0 2094060.0 1752840.0 True False 1923125.1382950798 1814499.5361306022 1843871.028233993 2109944.3934804406 2004785.7374108178 1843094.3165750932 1986531.0888072 1934815.2162111767 1713831.4909567824 1737311.201288886 1.1069548949366936 1.044429768704911 1.061336061648628 1.2144884531424787 1.1539589084117436 1.0608889847758585 1.1434514940866216 1.1136837284970968 0.9864850290985954 1.0 20.728424773771067 -7.759796886575776 24.893548583758456 0.9932424624710082 1.1125376953253123 0.4956370220026626 0.04808017620151497 34.91715360824272 529276.6061103193 0.03939375854473285 0.013091180289600265 1.738613763852719e-08 7.759796886575776 0.1192952328543041 KVVVSPT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 3 KVVVSPTK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVVVS(0.199)PT(0.801)K;KVVVS(0.176)PT(0.824)K;KVVVS(0.293)PT(0.707)K 100.07 0.004826100000000001 40153670000.0 49018470.0 43674730.0 38457100.0 35580420.0 37401830.0 39853490.0 36900120.0 41018400.0 41728030.0 38820720.0 True False 46299317.75320262 41576530.41369374 40936106.19953561 38961972.41915666 40345141.23369766 39604749.5860085 40630344.24006663 40876116.744166546 34151271.630034104 38476798.62286311 1.203304833310413 1.0805610628164048 1.0639166371604307 1.0126095156992938 1.048557641948007 1.029315093862179 1.055969979163596 1.062357529918764 0.8875809020592802 1.0 25.197485432055075 -1.000000000017158 0.6262870691327435 1.013559729998658 15.045360087613796 0.6063491539464905 0.04662113275771727 137.31783587144903 0.9687601311117592 0.019916196068154063 2655.8353014217587 0.09999999999604921 1.000000000017158 14.031800357615138 KVVVSPT(ph)KK ddPTM_KYSE-520_SHP099_60min_R1 1 KVVVSPTKK 9 2 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 KVVVS(0.258)PT(0.742)KK 85.554 0.0031997 0.0 1194500.0 1079500.0 985230.0 1064700.0 954460.0 1007700.0 963800.0 1002700.0 1078100.0 889200.0 True False 1128238.7038232854 1027639.1996374651 1048739.5022237373 1165888.7678862733 1029570.5718654692 1001410.5705126642 1061230.309781546 999221.8677319388 882344.2166893516 881322.3797871321 1.2801657256176695 1.1660196350462282 1.1899612744170207 1.3228856938455065 1.168211083115969 1.1362590959672862 1.2041340763840214 1.1337756655779956 1.001159436008497 1.0 19.74931031497398 -7.613085552603219 1.9096174522071614 0.988377157487964 1.2092652467578537 0.7107589801058363 0.052695002924204974 0.19231691834460893 1.2762995242958477 0.049014508105344516 0.01517667533913728 2.4373306360748028e-08 7.613085552603219 0.2208880892698898 KVYEDSGIPLPAES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 11 KVYEDSGIPLPAESPK 16 1 F8W038;H0YIS7;Q8IXM2;Q8IXM2-3;F8W1H0;Q8IXM2-2 F8W038;Q8IXM2-2 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 1 KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK;KVYEDSGIPLPAES(1)PK 254.8 5.6218000000000004e-24 28956740000.0 42295050.0 39410080.0 33887800.0 33383480.0 35835820.0 38574960.0 37386610.0 36685020.0 44216930.0 36518820.0 True False 39948859.26340814 37516760.60106387 36072261.81039712 36556235.90209075 38655895.1560757 38334199.36598509 41166013.39695149 36557768.227968074 36188250.130097315 36195291.66601203 1.1037032007375913 1.0365094152920649 0.9966009431074585 1.00997213227094 1.0679813140551158 1.059093534035023 1.137330616832881 1.010014467221338 0.9998054571301791 1.0 25.109298705943292 -7.493626056429546 24.967895356639048 1.0015717480171658 1.0553955690782622 0.2991331025107373 0.0388605569738634 927.6581704327147 791783.080897049 0.022978539578529366 0.01100421297086888 3.209031229556612e-08 7.493626056429546 0.0538238210610964 KWCFS(ph)EPGKLDR ddPTM_KYSE-520_SHP099_60min_R1 1 KWCFSEPGKLDR 12 2 C9JXU1;A6NN40;Q2M3G4-2;Q2M3G4 C9JXU1 SHROOM1 Protein Shroom1 1 KWCFS(1)EPGKLDR 75.574 0.010203 678610000.0 781890.0 921660.0 727880.0 638470.0 843050.0 758710.0 666280.0 687360.0 854040.0 740400.0 True False 738517.0030409276 877382.0701601361 774800.3094491769 699149.9968369942 909393.2387016582 753974.6094608157 733634.0846661647 684975.7085910296 698967.8645963954 733840.6320224827 1.0063724612870737 1.1956030122535592 1.0558154940450877 0.952727290270259 1.2392244296903379 1.0274364440448647 0.9997185392204998 0.9334120770925696 0.9524790998149324 1.0 19.48510726181756 -6.700475223787178 3.0355627869134785 0.9620600936348795 1.0890847206253857 0.3196662154397767 0.08046279020980912 0.2970048184768187 5.552107422809199 0.03427812836354987 0.024424882112949423 1.993080206828401e-07 6.700475223787178 0.1270246269905062 KWDGS(ph)EEDEDNSK ddPTM_KYSE-520_SHP099_60min_R1 4 KWDGSEEDEDNSK 13 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KWDGS(1)EEDEDNSK;KWDGS(1)EEDEDNSK;KWDGS(1)EEDEDNSK;KWDGS(1)EEDEDNSK 155.98 2.9242000000000003e-06 5967760000.0 14550900.0 13580600.0 12699400.0 13441300.0 13297500.0 12557000.0 11870600.0 13322600.0 16160600.0 13123800.0 True False 13743732.570499998 12928167.591103816 13518023.64375844 14718757.110725798 14343937.59757463 12478627.105217354 13070596.093891714 13276387.010118201 13226242.41557364 13007533.342161914 1.0565979120692934 0.9938984779842274 1.0392457423070254 1.1315563622671807 1.1027407902988777 0.9593384677146902 1.004848171445803 1.0206690739038768 1.016814031350803 1.0 23.632844069585722 -6.259744472222064 24.99708172780284 1.0019079056748281 1.0631565788997104 0.42446670559134336 0.03749064974833568 186.46205837525244 2750006.3046282334 0.014347211088701626 0.01367424208483393 5.498643048082328e-07 6.259744472222064 0.061248673224882255 KWDGS(ph)EEDEDNSKK ddPTM_KYSE-520_SHP099_60min_R1 7 KWDGSEEDEDNSKK 14 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK;KWDGS(1)EEDEDNSKK 179.75 4.9088e-09 24943900000.0 9165120.0 8247140.0 7809760.0 7591390.0 7839540.0 6832200.0 6935370.0 8185020.0 9293770.0 7082310.0 True False 8656712.523386247 7850935.015190494 8313189.625657817 8312873.423165378 8456467.19711902 6789557.705524095 7636464.882288501 8156628.076018022 7606255.644876176 7019566.24335381 1.2332261315408914 1.1184359179776715 1.1842882220149744 1.1842431761415577 1.2046993936592136 0.9672332264051944 1.0878827291527844 1.1619846288566325 1.083579153067734 1.0 22.742950454854547 -6.228095963041583 24.998177114287863 1.0719941251776368 1.1812025597791034 0.5451813310090768 0.05644460444248871 581.655932727866 436078.3702662174 0.018974499973026453 0.01897354072436189 5.914309353416071e-07 6.228095963041583 0.10920843460146656 KWDKDEYEK ddPTM_KYSE-520_SHP099_60min_R1 2 KWDKDEYEK 9 2 R4GNG8;Q96NC0 R4GNG8 ZMAT2 Zinc finger matrin-type protein 2 0 ; 124.1 0.00045684 3589800000.0 5751700.0 5914000.0 4343580.0 4086100.0 5693000.0 5911700.0 4889790.0 5642800.0 5194130.0 3841360.0 False True 5432641.735270307 5629882.562905024 4623574.116773726 4474441.715469235 6141006.711260944 5874802.887466233 5384097.69295156 5623226.443839415 4251006.925361905 3807328.5389328604 1.4268907134536384 1.47869628410975 1.2143880071010758 1.1752181798115475 1.6129437342914934 1.5430249392433195 1.4141405549573731 1.4769480454175685 1.1165327294169896 1.0 21.86034763647635 -7.883911304664427 4.262101109176539 1.0055076032982744 1.4151689968727064 0.5650199607588935 0.12769688582812794 0.16095690511061664 4.768128957470567 0.13342063649496702 0.03517627625104033 1.3064376727697767e-08 7.883911304664427 0.409661393574432 KWDLSELPK ddPTM_KYSE-520_SHP099_60min_R1 1 KWDLSELPK 9 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 124.1 0.001686 455600000.0 762880.0 635240.0 415130.0 392520.0 721270.0 641550.0 489530.0 539580.0 516840.0 537780.0 False True 720561.5256364231 604722.1168853211 441889.94403148507 429824.98278455855 778029.8455350737 637545.8484791103 539016.4697523974 537708.3229189184 422994.8844761388 533015.6875865093 1.351858007968058 1.134529678898379 0.8290374079463949 0.8064021243554812 1.4596753222367367 1.1961108525077615 1.0112581717680011 1.008803934746569 0.7935880581516395 1.0 19.023818469091434 -7.259093155719244 2.3116649246634378 0.9071345413405005 1.1134030325635784 0.1638517664074971 0.19744139114353618 0.6653640440868619 6.792563016684571 0.14369192697695382 0.06130612795642034 5.5068956139197657e-08 7.259093155719244 0.2062684912230779 KWLT(ph)SPVR ddPTM_KYSE-520_SHP099_60min_R1 1 KWLTSPVR 8 1 E7EPJ7;O75962-4;O75962;O75962-5;O75962-2;E7EWP2;A0A1W2PRD7;C9J1B4;H7BXZ5;O60229-5;O60229-6;O60229-4;O60229 E7EPJ7 TRIO;KALRN Triple functional domain protein;Kalirin 1 KWLT(0.5)S(0.5)PVR 57.532 0.052879999999999996 452410000.0 1315900.0 1096900.0 1092700.0 1067000.0 1108800.0 1066700.0 986090.0 1002300.0 1310500.0 1156400.0 True False 1242904.403818384 1044203.2775195345 1163137.1903818157 1168407.3591947525 1196056.2517909938 1060042.3296277248 1085773.6005109833 998823.2552385785 1072546.2350165995 1146155.1956655856 1.0844119614155874 0.9110487667537497 1.01481648801179 1.0194146164614688 1.0435377829408434 0.9248680576910406 0.9473181333706401 0.8714555053415348 0.9357774925007076 1.0 20.128370975424037 -6.275748023861925 24.327547872579842 0.9285644413164588 1.009164928149918 0.3727927139127456 0.050387746655339904 596.2716555526561 1013777.320772993 0.01724007817133944 0.01527603249352045 5.299708419346334e-07 6.275748023861925 0.08060048683345922 KWNLDELPK ddPTM_KYSE-520_SHP099_60min_R1 2 KWNLDELPK 9 1 P17844-2;P17844;J3KTA4;J3QR02;J3KRX8;J3QRQ7;X6RLV5;J3KTQ4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ; 120.09 0.0018667000000000002 844670000.0 2436630.0 2104770.0 1535300.0 1544160.0 2525700.0 2331420.0 1719890.0 1920810.0 1867400.0 2017570.0 False True 2301465.276598517 2003653.6898758216 1634267.8945668554 1690916.5021313692 2724458.2207327844 2316868.742983664 1893753.2657088432 1914147.1584304238 1528327.23332316 1999695.8994457102 1.1509076341239952 1.0019791961523792 0.8172582116210036 0.8455868227764378 1.362436269178713 1.1586105385453207 0.9470206276033106 0.9572191246484031 0.7642798256208819 1.0 20.93134919046464 -6.982001496492179 22.158422059099824 0.9068735651468128 1.0476346145092348 0.1588253305466537 0.15798805378609948 137.23017497780444 168945.49335764258 0.07262104497954462 0.048940122604768384 1.0423138377814854e-07 6.982001496492179 0.14076104936242195 KWPQGAVPQLPPSAPATS(ph)EMTTTPERPR ddPTM_KYSE-520_SHP099_60min_R1 1 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 F8VPD4;P27708;H7BZB3 F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.05)APAT(0.031)S(0.258)EMT(0.258)T(0.218)T(0.185)PERPR 90.741 0.003076 374520000.0 282570.0 286090.0 257010.0 234020.0 208690.0 260630.0 209680.0 259680.0 270230.0 298780.0 True False 266895.27881067025 272345.80697015533 273577.27583053935 256261.19043932128 225112.71571632655 259003.3114942106 230876.50067959633 258779.2306897676 221163.04394394206 296133.0416473224 0.9012681507135814 0.9196738244917083 0.9238323231635674 0.8653583167004841 0.7601742597316208 0.8746180772447162 0.7796377580673929 0.8738613876055038 0.7468367687498197 1.0 18.175885945571164 -5.460888640430311 4.937199107191938 0.8301373787070032 0.9137717593480917 0.1864079138514546 0.06892873922230505 0.2993180951050183 14.680614692343795 0.018208082274348687 0.02685589728983355 3.460280932054342e-06 5.460888640430311 0.08363438064108852 KWPQGAVPQLPPSAPATSEMTT(ph)TPERPR ddPTM_KYSE-520_SHP099_60min_R1 3 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 F8VPD4;P27708;H7BZB3 F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.002)APAT(0.056)S(0.056)EMT(0.056)T(0.415)T(0.415)PERPR;KWPQGAVPQLPPS(0.029)APAT(0.075)S(0.075)EMT(0.075)T(0.373)T(0.373)PERPR;KWPQGAVPQLPPS(0.003)APAT(0.018)S(0.04)EMT(0.127)T(0.407)T(0.407)PERPR 77.439 0.004283100000000001 5544500000.0 1666580.0 1663310.0 1468020.0 1313380.0 1411550.0 1749920.0 1289100.0 1588290.0 1887160.0 1651190.0 True False 1574131.4851551352 1583402.0909207903 1562650.9181150473 1438203.2403179044 1522630.9543791274 1738998.1001801353 1419414.8084036028 1582780.5926996737 1544499.315432222 1636561.741206381 0.9618527951134763 0.9675174795138469 0.9548377423042709 0.8787955896229995 0.930384058261517 1.0625924194575416 0.8673151599873588 0.9671377210204958 0.9437464389786506 1.0 20.64223660009184 KWPQGAVPQLPPSAPATSEMTTT(ph)PERPR ddPTM_KYSE-520_SHP099_60min_R1 4 KWPQGAVPQLPPSAPATSEMTTTPERPR 28 2 F8VPD4;P27708;H7BZB3 F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 KWPQGAVPQLPPS(0.011)APAT(0.081)S(0.081)EMT(0.13)T(0.104)T(0.593)PERPR;KWPQGAVPQLPPS(0.008)APAT(0.2)S(0.166)EMT(0.137)T(0.095)T(0.394)PERPR;KWPQGAVPQLPPSAPAT(0.006)S(0.003)EMT(0.041)T(0.204)T(0.746)PERPR;KWPQGAVPQLPPSAPAT(0.018)S(0.046)EMT(0.096)T(0.096)T(0.744)PERPR 154.99 9.6826e-07 6891430000.0 3083730.0 3359590.0 2489800.0 2307480.0 2686170.0 3169970.0 2569170.0 2809000.0 3549680.0 2850410.0 True False 2912669.3496366492 3198190.2535525984 2650296.491820853 2526782.2054308383 2897556.2967833867 3150185.0413893308 2828886.7762828977 2799256.2346255304 2905147.5921508763 2825157.5849854224 1.030975887899605 1.132039596852825 0.9381057205113493 0.8943862879931621 1.0256264330820817 1.1150475492522254 1.0013199940836202 0.9908318918216997 1.0283134673940202 1.0 21.429899911448903 -8.925967570769108 0.0028398240213918027 9.929073400105249e-05 2.0140479268885985 0.00837332564694293 0.06732212962782046 366514.3965158004 332.4812555646003 119039.25402860719 116745.91852351026 1.1858572940866707e-09 8.925967570769108 2.0139486361545975 KWQDEDGK ddPTM_KYSE-520_SHP099_60min_R1 2 KWQDEDGK 8 1 H7C422;P39023;H7C3M2;B5MCW2;G5E9G0 H7C422 RPL3 60S ribosomal protein L3 0 ; 111.65 0.0026138000000000003 1062910000.0 2249600.0 2081100.0 1369430.0 1254770.0 1999570.0 2125560.0 1500290.0 1776200.0 1817980.0 1734450.0 False True 2124810.2035335824 1981120.832205217 1457705.6489654696 1374022.963539643 2156924.783002993 2112293.591603551 1651953.9546193806 1770038.7767681975 1487880.6595463385 1719084.1223816825 1.236012930297903 1.1524280902906014 0.8479548091840383 0.7992761643543196 1.2546941449349844 1.2287319533130825 0.9609500391002987 1.0296405822862935 0.8655077667083411 1.0 20.71320871331026 -4.5380552242491845 23.92284662944035 1.0077980155391297 1.2151167979140989 0.23963322498988449 0.14220285494215196 187.00441195168096 294776.95511337376 0.0393207817558608 0.10413759620460199 2.8969751891642813e-05 4.5380552242491845 0.20731878237496915 KWQDEDGKK ddPTM_KYSE-520_SHP099_60min_R1 1 KWQDEDGKK 9 2 H7C422;P39023;H7C3M2;B5MCW2;G5E9G0 H7C422 RPL3 60S ribosomal protein L3 0 103.22 0.021738 5490000000.0 6118000.0 7542800.0 4233500.0 4646400.0 8490800.0 8466600.0 6413100.0 7707600.0 7244200.0 6493300.0 False True 5778622.344069359 7180432.566026371 4506398.183839501 5087992.459008897 9158977.65395651 8413756.8088742 7061398.733824494 7680864.134567367 5928835.89142103 6435774.413710951 0.89789075449233 1.1157060680574789 0.7002107118980034 0.7905796772754026 1.4231352849229724 1.3073417848439963 1.0972104178761606 1.1934638538920572 0.9212311542166667 1.0 22.61768232703185 -5.739615034417351 24.999864324114018 1.1712582641789508 0.8806484090919329 0.4053903044635505 0.1661323762207611 248.4682391773687 284619.9958944699 0.05095268771641839 0.06572298006474314 1.8213145856990668e-06 5.739615034417351 -0.290609855087018 KWS(ph)GAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 KWSGASPR 8 1 A0A0A0MSD0;Q4LDE5-3;Q4LDE5 A0A0A0MSD0 SVEP1 Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 2 KWS(1)GAS(1)PR;KWS(1)GAS(1)PR;KWS(1)GAS(1)PR;KWS(1)GAS(1)PR;KWS(1)GAS(1)PR 48.44 0.053466999999999994 2631080000.0 5172190.0 3832830.0 3428670.0 4104810.0 3916350.0 4307380.0 4921840.0 4006630.0 4402330.0 4816800.0 True False 4885278.31019486 3648695.09360488 3649687.554265969 4494929.908243875 4224544.464016645 4280496.0436785165 5419387.619729421 3992731.935684469 3602977.8457082277 4774126.899413689 1.0232820394436566 0.7642643713666213 0.7644722545423306 0.9415187327332873 0.8848831530924455 0.8966029043350743 1.1351578485261833 0.8363271483577064 0.754688327650174 1.0 22.18680548403076 -5.293692366959814 24.54389116274675 0.9208543975707824 0.8420319783669977 0.07099311972070921 0.11583177405490856 1358.2274027117908 1033580.9848980772 0.033496212327259654 0.049688001093508245 5.085195254556688e-06 5.293692366959814 -0.07882241920378463 KWS(ph)LNTYK ddPTM_KYSE-520_SHP099_60min_R1 1 KWSLNTYK 8 1 P53367-2;P53367 P53367-2 ARFIP1 Arfaptin-1 1 KWS(0.781)LNT(0.219)YK 149.49 0.00045509 3633300000.0 1706100.0 1155800.0 1152900.0 1104900.0 1172300.0 1249700.0 1210900.0 1211100.0 1244100.0 1077100.0 True False 1611459.23197397 1100273.6331088303 1227217.7787052218 1209909.363799701 1264553.3405254174 1241900.158747323 1333309.5892451496 1206898.976772865 1018202.8012088143 1067557.7319711195 1.5094820483371898 1.030645556823709 1.1495563583613495 1.1333432633809377 1.1845292321480063 1.163309600553687 1.2489344129271123 1.1305233811987556 0.953768373096622 1.0 20.025882660131348 -1.0000000000000002 0.11055306817594378 0.9379260054211516 1.9461147601288609 0.3315000608321872 0.12024619220060387 158.5689809526853 1.22540781785737 1.1064304586707419 24.401622672133676 0.09999999999999995 1.0000000000000002 1.0081887547077093 KWSLNT(ph)YK ddPTM_KYSE-520_SHP099_60min_R1 1 KWSLNTYK 8 1 P53367-2;P53367 P53367-2 ARFIP1 Arfaptin-1 1 KWS(0.035)LNT(0.861)Y(0.103)K 115.57 0.001194 3310700000.0 1668100.0 1194300.0 1092300.0 1104800.0 1193300.0 1260400.0 1225900.0 1145000.0 1333800.0 994650.0 True False 1575567.1677250909 1136924.035319154 1162711.4057417929 1209799.8598297676 1287205.9210517616 1252533.3760783593 1349825.9356310412 1141028.2622450083 1091615.5423618006 985838.1748259909 1.5982006052902062 1.1532562486939917 1.179414061488359 1.2271789536282747 1.3056969733181256 1.2705263480991111 1.3692165409087524 1.157419433921201 1.1072968872954025 1.0 19.910991322321383 -13.999999999026471 0.08714260292253223 0.10947918834750178 1.4933784348845212 0.40168757178215553 0.12071180020529858 261.201843661416 1.5874491158059927 43.03152059557336 3.267029044585958 1.000000002241633e-14 13.999999999026471 1.3838992465370195 KY(ph)ILS(ph)KDVNTATCDKNPSASK ddPTM_KYSE-520_SHP099_60min_R1 1 KYILSKDVNTATCDKNPSASK 21 3 A2A341;Q9BX26 A2A341 SYCP2 Synaptonemal complex protein 2 2 KY(0.897)ILS(0.839)KDVNT(0.103)AT(0.101)CDKNPS(0.059)ASK 64.028 0.010291 2449400000.0 1564900.0 1464700.0 1444300.0 1294900.0 1417800.0 1448200.0 1237700.0 1333100.0 1681300.0 1201300.0 True False 1478091.87744919 1394333.6134404773 1537401.8889617075 1417966.9066741187 1529372.7938214948 1439161.246617485 1362818.7947879445 1328475.7872478797 1376018.302123929 1190657.4165972585 1.2414081975597826 1.1710619645954068 1.291221024226598 1.1909109093079693 1.2844776108582434 1.2087114450858734 1.1445935462130665 1.1157498107595785 1.1556794447696024 1.0 20.18332694098732 -7.859504869786368 0.5476521587763907 1.0016143351305702 1.238909919932747 0.7361935503540616 0.04186929745842472 0.4420486023632185 0.328158890043373 0.044708358273680256 0.021791790878607303 1.3819589097744246e-08 7.859504869786368 0.23729558480217672 KYAVLYQPLFDKR ddPTM_KYSE-520_SHP099_60min_R1 1 KYAVLYQPLFDKR 13 2 P55209;P55209-2;H0YIV4;F5H4R6;F8VY35;F8W118;F8VV59;H0YH88;F8W0J6;F8W543;F8W020;H0YHC3;F8VRJ2;B7Z9C2;F8VVB5 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 0 81.525 0.0078551 151830000.0 174170.0 182500.0 178810.0 130080.0 238100.0 181140.0 163930.0 127220.0 150410.0 112400.0 False True 164508.442900713 173732.42606191518 190336.37870611556 142442.76409002178 256837.11539631634 180009.4380695288 180501.64420262398 126778.70351337107 123099.33552754424 111404.22344587684 1.476680486719928 1.5594779146440445 1.7085203129537192 1.2786118845774668 2.3054522301939 1.6158223853782547 1.6202405853160184 1.1380062585774728 1.104979072784877 1.0 16.765444402167915 -7.278361582466526 3.2196716119182454 1.0651604779778288 1.666097589958358 0.52811708910644 0.24830550443652166 0.20899705997700013 4.465284410996083 0.1506361887077473 0.06930054829839834 5.267910860206333e-08 7.278361582466526 0.6009371119805293 KYDAFLASESLIK ddPTM_KYSE-520_SHP099_60min_R1 3 KYDAFLASESLIK 13 1 P62906 P62906 RPL10A 60S ribosomal protein L10a 0 ;; 169.04 1.7276e-06 1455643000.0 2888290.0 2163060.0 1654000.0 1820130.0 2673670.0 2085200.0 1719880.0 1956340.0 1920790.0 1624720.0 False True 2728070.7960366313 2059143.3507807455 1760619.4864935684 1993114.607957959 2884072.617898656 2072185.4933343315 1893742.2548112539 1949553.9131531902 1572022.9551755325 1610326.2448130348 1.6941106218841828 1.278711911585233 1.0933309272978926 1.237708578853453 1.7909865328149752 1.286810980078711 1.1759991249668322 1.2106577281670903 0.9762139567923707 1.0 20.618921570765107 -7.237204795544665 1.3188935828254222 1.0031936749668293 1.3857366657351855 0.37760437355561016 0.20195127127226503 0.5703554962281674 1.7664534972178538 0.1774616052340116 0.06920022796637086 5.791555259258188e-08 7.237204795544665 0.3825429907683562 KYDEVLHMVR ddPTM_KYSE-520_SHP099_60min_R1 2 KYDEVLHMVR 10 1 A0A3B3IT15;P53621;P53621-2;A0A3B3IU89 A0A3B3IT15 COPA Coatomer subunit alpha;Xenin;Proxenin 0 ; 131.84 0.00067065 1348620000.0 4375600.0 3873300.0 2586300.0 2415100.0 4306800.0 3341900.0 2809100.0 2879700.0 2797800.0 2662400.0 False True 4132876.7454576567 3687220.854058173 2753017.0362263103 2644630.3778737094 4645720.65766004 3321041.9624851337 3093071.2421740475 2869710.9928270346 2289790.0467985095 2638813.2073158585 1.5661876839177737 1.397302713142296 1.0432784816272076 1.002204464697131 1.7605341085834427 1.2585362060784981 1.1721448238923475 1.0875006176530548 0.8677347985262028 1.0 21.33145780008808 -7.191811361166638 1.7618102066234067 0.9479038038954527 1.3290047518122243 0.3619930271901408 0.21369422275464295 0.47054170336580114 2.720510013012324 0.16395332377661054 0.06885815064576102 6.429669338392101e-08 7.191811361166638 0.3811009479167716 KYDVDTLDMVFLDHWK ddPTM_KYSE-520_SHP099_60min_R1 2 KYDVDTLDMVFLDHWK 16 1 H7BZ45;E7EMS6;E7EUU8;P21964-2;P21964 H7BZ45 COMT Catechol O-methyltransferase 0 ; 291.0 4.1813e-37 1602290000.0 3100700.0 2814500.0 2005070.0 2352400.0 3964400.0 2994500.0 2359900.0 2281500.0 2500600.0 1573390.0 False True 2928697.989907791 2679287.1953493687 2134320.020425428 2575971.388725148 4276375.725649545 2975810.2147466238 2598461.7224045177 2273586.009006104 2046554.0749961927 1559450.9886788963 1.8780314425840758 1.7180964421454195 1.3686355236040715 1.6518450450997544 2.7422315652717737 1.908242218800098 1.6662670011872762 1.4579400221690801 1.312355495525993 1.0 20.572606780900603 -7.5800218032723725 1.3777256492420067 1.0549700214367976 1.8658739943308025 0.43168125558434967 0.3341751679641418 0.453790768225748 1.5670054093098054 0.3388810463387797 0.11093821457460878 2.6301359455252436e-08 7.5800218032723725 0.8109039728940048 KYEFGESDLR ddPTM_KYSE-520_SHP099_60min_R1 4 KYEFGESDLR 10 1 Q14204;A0A2R8Y706;A0A2R8Y5T0;A0A2R8Y542;A0A2R8Y6I5 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ;;; 141.73 0.00056328 5785700000.0 22158600.0 20131300.0 13284300.0 11997500.0 20041300.0 20626300.0 15290800.0 16174500.0 16508300.0 16779700.0 False True 20929418.285926044 19164162.130302653 14140627.233631514 13137738.792820103 21618436.290601447 20497563.610762514 16836543.28782702 16118394.434656696 13510808.860377362 16631044.912409056 1.2584547992116724 1.1523125715332259 0.8502548882590446 0.7899526976213945 1.299884427253943 1.2324880197676877 1.0123563117350873 0.9691750890907731 0.812384846023501 1.0 23.987375478813426 -7.241992748719275 2.9406098542732915 0.908907200306698 1.0846382272636692 0.1745086531369786 0.16318614503008613 0.541423741202381 9.368122643136898 0.10739095608425572 0.050286310323470494 5.728055948639514e-08 7.241992748719275 0.17573102695697118 KYELGRPAANTK ddPTM_KYSE-520_SHP099_60min_R1 1 KYELGRPAANTK 12 2 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 0 107.99 0.00025829 2401300000.0 9058300.0 7063900.0 5135700.0 4985600.0 4460100.0 6204800.0 4534300.0 6784100.0 6099800.0 4241800.0 False True 8555818.041726625 6724539.640869938 5466755.43941054 5459429.925024703 4811084.4955023555 6166073.541646306 4992671.294503493 6760567.540520849 4992230.083444677 4204220.952070468 2.035054327369048 1.5994734143452378 1.3003016496357802 1.2985592306551057 1.1443462535271898 1.466638792761279 1.1875377986603521 1.608042873482053 1.187432853876563 1.0 22.003407061193208 -4.375283427040656 1.9572244979347793 1.2926584799627596 2.1622774523107267 0.6824512740776556 0.16173365303874884 0.3288848458660769 1.623045788805345 0.041366222280120886 0.474394327539065 4.2142138779816277e-05 4.375283427040656 0.869618972347967 KYEQGFITDPVVLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 KYEQGFITDPVVLSPK 16 1 P12268;H0Y4R1 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 KYEQGFITDPVVLS(1)PK;KYEQGFITDPVVLS(1)PK 197.68 1.3946e-12 3820300000.0 5710300.0 5597500.0 5185300.0 4987500.0 5573800.0 5544300.0 5371400.0 5342000.0 6565800.0 5516100.0 True False 5393538.27579917 5328587.697981208 5519552.734773336 5461510.500453445 6012426.349416161 5509695.967146338 5914393.531812205 5323469.848832176 5373616.230348712 5467231.645460858 0.9865208986118466 0.9746409231453073 1.009569941920408 0.9989535572336389 1.0997204324437118 1.0077670609989127 1.0817894531179415 0.973704827973031 0.9828769986013177 1.0 22.382379072843683 -5.054633867344614 2.180867123822796 1.0251606639277155 0.9810522684475405 0.13696984769396614 0.038596374490145 0.5973973016618392 5.56242628856878 0.011510690178791444 0.027419109824990774 8.8179195584968e-06 5.054633867344614 -0.04410839548017509 KYES(ph)DEDS(ph)LGSSGR ddPTM_KYSE-520_SHP099_60min_R1 1 KYESDEDSLGSSGR 14 1 O00418 O00418 EEF2K Eukaryotic elongation factor 2 kinase 2 KYES(1)DEDS(1)LGSSGR 137.45 0.0010125 0.0 358410.0 316380.0 278890.0 317420.0 311010.0 315330.0 297450.0 325930.0 391850.0 302660.0 True False 338528.2828273781 301180.6299039381 296867.69563977706 347587.501364197 335484.71759516303 313361.9085042758 327519.14883224847 324799.4249026343 320699.91773464705 299978.66786591674 1.1285078543608045 1.0040068250405012 0.9896293551529131 1.1587073968858355 1.1183619154716582 1.0446139744988168 1.091808131432338 1.0827417403153874 1.0690757446725918 1.0 18.194500385630324 -5.239597089281735 24.998825391546458 1.0847271981899027 1.037043905198659 0.10507477985421998 0.05234159906099065 1617.9184672592876 1851728.5647170225 0.014047084288638097 0.024307813531363732 5.759740415214137e-06 5.239597089281735 -0.04768329299124363 KYGGSVGSQPPPVAPEPGPVPS(ph)SPSQEPPTKR ddPTM_KYSE-520_SHP099_60min_R1 3 KYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 32 2 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 KYGGSVGSQPPPVAPEPGPVPS(0.447)S(0.447)PS(0.1)QEPPT(0.006)KR;KYGGSVGSQPPPVAPEPGPVPS(0.488)S(0.488)PS(0.023)QEPPTKR;KYGGSVGSQPPPVAPEPGPVPS(0.483)S(0.483)PS(0.033)QEPPT(0.001)KR 137.44 1.4265e-06 7496240000.0 3452120.0 3501350.0 2842620.0 2260210.0 2224110.0 3253520.0 2994300.0 3416720.0 4281960.0 3501720.0 True False 3260624.0219693906 3333139.8903665002 3025859.8335528118 2475019.678843085 2399134.803545154 3233213.5748480307 3296993.0655518635 3404868.195788444 3504464.0034274575 3470697.4850969375 0.9394722634197894 0.9603660084691606 0.8718304740029218 0.7131188153017483 0.6912543700068823 0.9315745865870895 0.9499511495049755 0.9810328357365738 1.0097290295323957 1.0 21.726794190967148 -6.507426611257897 20.956367580862572 0.9774786582815813 0.8348134544975089 0.4343113699758444 0.0811317810577659 96.92234362586466 131449.28074131344 0.033838286510123744 0.02880538826725823 3.1086611718081996e-07 6.507426611257897 -0.14266520378407244 KYGGSVGSQPPPVAPEPGPVPSS(ph)PSQEPPTKR ddPTM_KYSE-520_SHP099_60min_R1 1 KYGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 32 2 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 KYGGSVGSQPPPVAPEPGPVPS(0.177)S(0.697)PS(0.063)QEPPT(0.063)KR 75.005 0.0011572000000000002 523470000.0 673720.0 710890.0 659760.0 481420.0 509240.0 711870.0 590300.0 717700.0 895190.0 724620.0 True False 636347.4085724773 676737.7773323548 702289.1852533239 527174.0120557988 549314.2908207485 707426.9552752314 649973.2847728233 715210.4662124399 732646.06190348 718200.4305458294 0.8860303913892893 0.9422686878898651 0.9778456756418079 0.7340207407772629 0.7648481781099351 0.9849993472401427 0.9050026387186183 0.99583686641469 1.020113648980511 1.0 19.454026992304527 -6.978274161587599 1.4787050748001667 1.0091894850985592 0.8717859541819345 0.3593228653195929 0.07604782185356004 0.5277254651001663 2.240677305615958 0.05682881517117343 0.02767115024670349 1.0512980004940021e-07 6.978274161587599 -0.13740353091662472 KYGLNMCR ddPTM_KYSE-520_SHP099_60min_R1 2 KYGLNMCR 8 1 A0A2R8Y851;P62273;P62273-2;A0A2R8Y6P7;A0A087WTT6 A0A2R8Y851 RPS29 40S ribosomal protein S29 0 ; 98.39200000000001 0.007317100000000001 679850000.0 1049200.0 970330.0 665910.0 757230.0 891290.0 930610.0 799120.0 1042770.0 910500.0 909320.0 False True 990998.7844716532 923713.8903049766 708835.6240936716 829196.9115304995 961429.4522536041 924801.7177977486 879902.8482596288 1039152.8742543487 745176.1518371728 901264.1322402543 1.0995653205551932 1.0249091883962134 0.7864904401906386 0.9200376247852904 1.0667565898398708 1.026116190265985 0.9762985309006714 1.1529948181465373 0.8268121687977344 1.0 19.781590451096047 -5.7495385291121455 24.992453501892058 1.0151172269192144 0.9503148123697861 0.04649911406470031 0.1070454240463962 650.7101415255369 1366521.5060659233 0.032051411480556784 0.041036642009199875 1.7801699712932207e-06 5.7495385291121455 -0.06480241454942826 KYHNVGLSK ddPTM_KYSE-520_SHP099_60min_R1 1 KYHNVGLSK 9 1 Q14103-3;Q14103;H0YA96;H0Y8G5;Q14103-4;Q14103-2 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 0 114.97 0.0017259 1434400000.0 4589200.0 4163800.0 3102200.0 4584700.0 2996200.0 3907100.0 3128400.0 3995300.0 3547100.0 2500900.0 False True 4334627.927656608 3963764.7980087767 3302172.7756954967 5020428.509559681 3231983.893953981 3882714.3396348464 3444649.2022417407 3981441.23681003 2903036.0551143717 2478743.971670758 1.748719503585891 1.5991021433879935 1.332195988547264 2.025392120742402 1.3038796789389722 1.5664039465188349 1.3896752716739558 1.6062333513720672 1.1711722099146957 1.0 21.241177833134312 -8.160361869764293 0.418071227898758 0.9514190352994534 1.643753117925103 0.466779888921098 0.20572475245510916 1.3691107568759 0.5780518761394037 0.3194338645929809 0.1466337650454218 6.91254752596274e-09 8.160361869764293 0.6923340826256497 KYHPDTNKDDPK ddPTM_KYSE-520_SHP099_60min_R1 1 KYHPDTNKDDPK 12 2 I3L1T6;Q96EY1-2;Q96EY1 I3L1T6 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial 0 84.289 0.0028956 998920000.0 1496300.0 1871600.0 1239300.0 1131100.0 1641100.0 1952200.0 1296700.0 1781800.0 1889300.0 1049200.0 False True 1413297.2561998994 1781685.5266711242 1319187.2609501106 1238599.4039223853 1770245.2334182903 1940015.595668178 1427783.0905724554 1775619.351675248 1546250.7453772337 1039904.9042652475 1.3590639397921438 1.7133158227866876 1.2685652847095592 1.1910698746031272 1.702314534874773 1.865570195612175 1.3729939004194485 1.7074824288186476 1.4869155237514229 1.0 19.98802017421197 -8.04948392653081 22.015866194266298 0.9999999969953748 1.5265423435335104 0.35365791974079464 0.2107556583225503 3708.3500829779873 1649878.67938428 0.21044121351752573 0.054335687709300244 8.923106438670451e-09 8.04948392653081 0.5265423465381356 KYIEIDS(ph)DEEPR ddPTM_KYSE-520_SHP099_60min_R1 3 KYIEIDSDEEPR 12 1 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 KYIEIDS(1)DEEPR;KYIEIDS(1)DEEPR;KYIEIDS(1)DEEPR 179.46 4.6592e-07 988480000.0 1777100.0 1792540.0 1501200.0 1567240.0 1603350.0 1646910.0 1637520.0 1635580.0 1882750.0 1598750.0 True False 1678520.7204389763 1706423.6877426035 1597969.754004927 1716190.0183921116 1729524.5231864096 1636631.0237997524 1803056.502255116 1629906.5547272419 1540890.06026517 1584586.318808678 1.0592800786648973 1.076889070344571 1.0084460120836527 1.0830524017665226 1.0914675348747798 1.0328443483155922 1.137872062161112 1.0286006734884827 0.9724241854010454 1.0 20.59567482060335 -7.520644467798919 12.272327058103857 0.9909360705829161 1.0688840839080858 0.5072887768430827 0.03317060990620736 0.12154287385413122 628.7173912662989 0.02033127782963288 0.008317334281494728 3.0154736108161816e-08 7.520644467798919 0.07794801332516965 KYIEIDS(ph)DEEPRGELLSLR ddPTM_KYSE-520_SHP099_60min_R1 6 KYIEIDSDEEPRGELLSLR 19 2 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 KYIEIDS(1)DEEPRGELLSLR;KYIEIDS(1)DEEPRGELLSLR;KYIEIDS(1)DEEPRGELLSLR;KYIEIDS(1)DEEPRGELLSLR;KYIEIDS(1)DEEPRGELLSLR;KYIEIDS(1)DEEPRGELLSLR 256.75 1.3025e-28 6561310000.0 3199090.0 3731500.0 3492780.0 2887130.0 2816100.0 2818540.0 2354180.0 2652090.0 4373510.0 2900690.0 True False 3021630.1004721876 3552233.1389043136 3717930.18744559 3161521.9671527124 3037711.0485828067 2800948.4463756746 2592163.488982697 2642890.5187924565 3579390.831215143 2874992.143302672 1.0510046462252463 1.2355627291640718 1.2931966426783292 1.0996628197810958 1.0565980347665263 0.9742456002533839 0.9016245470517797 0.9192687795509636 1.2450089088254992 1.0 21.455126582830314 -5.673576995689156 2.4952223021128717 0.9999017101566131 1.196746172895471 0.35404394270890516 0.105966888342212 0.2938707980875508 3.726596406971327 0.03464971441503818 0.0464565551174981 2.120425431392479e-06 5.673576995689156 0.1968444627388578 KYPDYESK ddPTM_KYSE-520_SHP099_60min_R1 2 KYPDYESK 8 1 A0A494C039;Q9Y4L1;E9PJ21;A0A087WWI4;K7EQK2;A0A087X054;Q9Y4L1-2 A0A494C039 HYOU1 Hypoxia up-regulated protein 1 0 ; 92.538 0.009754700000000002 1148130000.0 2544800.0 2304600.0 1470910.0 1470270.0 2325200.0 2371900.0 1753670.0 1999180.0 1995290.0 1701020.0 False True 2403634.871066971 2193883.5567248776 1565727.2121392137 1610004.0187472065 2508180.011421737 2357096.092288367 1930948.077769875 1992245.3111921193 1632995.633167701 1685950.286173534 1.4256854966478925 1.3012741684715738 0.9286912105177306 0.9549534360240854 1.4876951188841703 1.3980816110764918 1.1453173285152984 1.1816750040202895 0.9685906201148908 1.0 20.685130565302668 -7.662432079369148 2.6797200966664496 0.9771526073377576 1.2292398935277011 0.2337789873420031 0.17711318314644198 0.47367099768461995 6.317891698537782 0.17182207135383465 0.05184682693010602 2.175544247376661e-08 7.662432079369148 0.2520872861899436 KYPS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 8 KYPSPQK 7 1 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 KY(0.01)PS(0.99)PQK;KY(0.001)PS(0.999)PQK;KY(0.001)PS(0.999)PQK;KY(0.001)PS(0.999)PQK;KY(0.002)PS(0.998)PQK;KYPS(1)PQK;KYPS(1)PQK;KYPS(1)PQK 98.943 0.005757 43591570000.0 24147600.0 22105000.0 20132050.0 18789850.0 20125110.0 21001200.0 19674200.0 21419900.0 25475800.0 21159100.0 True False 22808084.4909528 21043042.619718563 21429794.155418888 20575631.69462559 21708841.66078774 20870123.72080042 21663060.13768844 21345599.36634225 20850036.91265616 20971646.835530683 1.0875676416747004 1.0034043956942342 1.021846034480802 0.981116640766897 1.0351519759529844 0.9951590299261448 1.0329689560185777 1.01783133836576 0.9942012220676685 1.0 24.321936820265293 -4.258334699649145 24.97329355121657 1.0102847727726934 1.0875676704475026 0.6627487449217433 0.016777748405536395 164.2273420315416 1320939.3344615176 0.003895804894497862 0.026298058819670376 5.51652131226995e-05 4.258334699649145 0.07728289767480923 KYQEDS(ph)DPERS(ph)DYEEQQLQK ddPTM_KYSE-520_SHP099_60min_R1 1 KYQEDSDPERSDYEEQQLQK 20 2 Q6P6C2-3;Q6P6C2;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 2 KYQEDS(1)DPERS(1)DYEEQQLQK 141.5 1.709e-06 616690000.0 313590.0 271530.0 282980.0 297080.0 279660.0 300030.0 290780.0 335980.0 383570.0 329100.0 True False 296194.53757383366 258485.291225161 301221.3435840087 325314.39387964143 301667.6509522632 298157.40147952206 320174.8801393218 334814.56379832147 313923.35701283306 326184.4300359254 0.9080584794964348 0.7924513478362283 0.9234694113107504 0.9973326864308386 0.9248376782393876 0.9140761300184791 0.9815762208639396 1.0264578347944 0.9624106122363292 1.0 18.315328393071336 -4.938520602230867 0.46394772240703175 0.99569171161289 0.8019305762062742 0.476670944989282 0.04601783619715689 2.3975497087045876 0.6276323700024264 0.036910257669389726 0.2396890165395369 1.1520714061171755e-05 4.938520602230867 -0.19376113540661588 KYS(ph)ASSGGLCEEATAAK ddPTM_KYSE-520_SHP099_60min_R1 3 KYSASSGGLCEEATAAK 17 1 Q9UHV7;J3QRB7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 KYS(0.996)AS(0.003)S(0.001)GGLCEEATAAK;KYS(0.96)AS(0.031)S(0.009)GGLCEEATAAK;KY(0.001)S(0.826)AS(0.098)S(0.074)GGLCEEATAAK 193.73 1.4082e-12 4449760000.0 2461260.0 2444890.0 2108690.0 1880550.0 2052140.0 2557550.0 2200400.0 2546550.0 3136080.0 2767590.0 True False 2324729.001399828 2327433.814545295 2244619.53142329 2059276.9065920243 2213631.742920607 2541587.381774999 2422837.905834526 2537716.612419235 2566646.9261433515 2743071.3057524394 0.8474912761198318 0.8484773289212281 0.8182869788022439 0.7507194225223224 0.8069902296299933 0.9265480545274516 0.883257354904935 0.9251369467127744 0.9356836334370485 1.0 21.387360694652305 -6.2632129670531596 24.62759010491993 0.9262670226500626 0.8129655211556558 0.7206633414714063 0.03710542765058068 78.28037772453598 1086974.5736929192 0.013329449893135399 0.01236968271803072 5.454903008178453e-07 6.2632129670531596 -0.11330150149440676 KYS(ph)DVEVPASVTGYSFASDGDSGTCSPLR ddPTM_KYSE-520_SHP099_60min_R1 1 KYSDVEVPASVTGYSFASDGDSGTCSPLR 29 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 KY(0.012)S(0.958)DVEVPAS(0.025)VT(0.004)GYSFASDGDSGTCSPLR 50.493 0.058321000000000005 674340000.0 85866.0 82638.0 58591.0 62599.0 88225.0 79952.0 68005.0 71392.0 109300.0 92532.0 True False 81102.84181037276 78667.94643783316 62367.869608914574 68548.3901389243 95167.80556841673 79452.98991131142 74879.60906484134 71144.357815018 89453.87522877859 91712.23846880661 0.8843186379967997 0.857769341924741 0.6800386802261651 0.7474290376440779 1.0376783639490539 0.8663291970387919 0.8164625606680571 0.7757346129896916 0.9753755520775328 1.0 16.48482664554134 -9.081513932374474 0.3195454950108066 1.0467465454830338 0.81592984660126 0.22089673349311667 0.09628887077636063 9.848598577457585 1.3982412426357793 0.6513416038666098 0.11212167493186147 8.288693253226152e-10 9.081513932374474 -0.2308166988817738 KYS(ph)EVDDSLPSGGEKPSK ddPTM_KYSE-520_SHP099_60min_R1 1 KYSEVDDSLPSGGEKPSK 18 2 H0YMH7;Q05D32-2;Q05D32;H0YNU2;H0YNW9 H0YMH7 CTDSPL2 CTD small phosphatase-like protein 2 1 KYS(0.997)EVDDS(0.003)LPSGGEKPSK 150.64 2.396e-06 3795400000.0 1220300.0 1450500.0 1302400.0 1727500.0 1655000.0 2182300.0 2830900.0 3358600.0 3096000.0 2864100.0 True False 1152607.5263922606 1380815.8027551125 1386354.7879136798 1891681.080608188 1785239.0843381106 2168679.4562169183 3117074.9989215415 3346949.800503134 2533844.44380877 2838726.3022360834 0.4060298188960112 0.48642089998864446 0.4883721219695041 0.6663837507399352 0.628887358014003 0.7639621525008012 1.0980540802634622 1.1790322293018243 0.8925990652261346 1.0 21.436812326649402 -6.312087807805346 1.1956027681471766 1.0658812669051023 0.48664163680529066 0.8601414531843218 0.09643479345633484 0.1634396907384479 0.47966242036763246 0.05179060728053713 0.04458237331720286 4.87429929147199e-07 6.312087807805346 -0.5792396300998117 down KYS(ph)EVDDSLPSGGEKPSKNETGLLSSIK ddPTM_KYSE-520_SHP099_60min_R1 1 KYSEVDDSLPSGGEKPSKNETGLLSSIK 28 3 H0YMH7;Q05D32-2;Q05D32;H0YNU2;H0YNW9 H0YMH7 CTDSPL2 CTD small phosphatase-like protein 2 1 KYS(0.834)EVDDS(0.147)LPS(0.019)GGEKPSKNETGLLSSIK 138.79 2.9632e-06 1340900000.0 387470.0 471680.0 498250.0 510230.0 620450.0 684630.0 772450.0 955080.0 1270900.0 797560.0 True False 365976.2666977042 449019.78479388583 530367.9922281866 558722.1057937572 669275.8851224044 680356.9702193954 850536.7843855107 951767.0503973486 1040136.5967818365 790494.2388922896 0.46297145341696927 0.5680241078329579 0.6709321411012243 0.706800983871417 0.8466549813952509 0.8606729015163623 1.0759557028237905 1.2040151636412286 1.3158054108520358 1.0 19.592395422723417 -6.148879520478722 0.7179433009289647 1.207450987493986 0.5200030467113628 0.8737609466193252 0.09355752878136969 0.2308993768383413 0.2638065179584811 0.06638779263789946 0.07510704189054082 7.097746423250774e-07 6.148879520478722 -0.6874479407826233 KYS(ph)NEDTLSVALPYFWEHFDK ddPTM_KYSE-520_SHP099_60min_R1 1 KYSNEDTLSVALPYFWEHFDK 21 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 1 KYS(0.937)NEDT(0.063)LSVALPYFWEHFDK 220.66 2.2958e-19 273700000.0 233910.0 285610.0 216450.0 271260.0 211270.0 228310.0 262560.0 263520.0 264650.0 185420.0 True False 220934.54601197512 271888.8668906501 230402.71333224498 297040.4688427073 227895.7470381346 226885.03260270556 289102.12713866227 262605.9106260303 216596.23128358903 183777.32305457705 1.202186114912357 1.4794473135834407 1.253705895279699 1.61630642946352 1.2400645697209092 1.2345649007811843 1.5731109928769966 1.4289353346824147 1.1785797490328316 1.0 17.48759923271181 -7.975231335980159 3.744029590039834 1.0016771538685572 1.3819119960911925 0.4333738506535506 0.13951443267838223 0.1725274798537452 5.7512572358032745 0.13035971378923614 0.03441788074909083 1.0586896419186015e-08 7.975231335980159 0.38023484222263537 KYSAS(ph)SGGLCEEATAAK ddPTM_KYSE-520_SHP099_60min_R1 1 KYSASSGGLCEEATAAK 17 1 Q9UHV7;J3QRB7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 KYS(0.012)AS(0.849)S(0.133)GGLCEEAT(0.006)AAK 235.7 3.772e-23 336490000.0 206270.0 200350.0 149380.0 164360.0 163790.0 186550.0 178420.0 200950.0 216660.0 208860.0 True False 194827.7919109495 190724.8852685189 159009.2738164506 179980.72498336397 176679.34116237992 185385.67225279115 196456.43481139603 200252.9513520827 177320.00555413717 207009.66289062117 0.9411531287498002 0.9213332489184007 0.7681248865202355 0.8694315157571237 0.8534835461073764 0.8955411533168111 0.9490206015899789 0.9673604050932223 0.8565783986993337 1.0 17.659338586504465 -6.588746401992897 3.8456476274363407 0.9402187037910595 0.8680451325127341 0.2803916706879077 0.05460504207470334 0.3207718558045692 9.572317694422951 0.0223378924115662 0.017154890625858833 2.5778259900848973e-07 6.588746401992897 -0.07217357127832547 KYSDVEVPASVTGYSFASDGDSGTCS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 3 KYSDVEVPASVTGYSFASDGDSGTCSPLR 29 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 KYSDVEVPASVTGYSFAS(0.001)DGDS(0.096)GT(0.261)CS(0.641)PLR;KYSDVEVPASVTGYSFASDGDSGT(0.017)CS(0.983)PLR;KYSDVEVPASVTGYSFASDGDSGTCS(1)PLR 253.06 8.5662e-32 4567100000.0 2653530.0 2861090.0 2308760.0 2094470.0 2094260.0 2468440.0 2296830.0 2111840.0 2994670.0 2248940.0 True False 2506333.4012190895 2723638.9418163537 2457586.3637466114 2293527.799074633 2259066.3472905923 2453033.5503386753 2529015.991300637 2104514.519947159 2450913.417487339 2229016.1412488464 1.1244124054726994 1.2219018478216968 1.1025430988443647 1.0289417634228717 1.0134813765973492 1.1005005773373715 1.1345884601282923 0.9441450337672598 1.0995494254761973 1.0 21.087975633124778 -4.982863654447032 5.013220719994123 1.0490304903533878 1.1726317295676278 0.4429132896417449 0.05693961951388899 0.15838794737685152 11.170765385611382 0.015007646452657853 0.030901477515419676 1.0402466971467337e-05 4.982863654447032 0.12360123921424004 KYSSS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 KYSSSLR 7 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 KYS(0.012)S(0.072)S(0.915)LR 83.948 0.0064985 237910000.0 295500.0 297980.0 258070.0 228980.0 225690.0 193130.0 200830.0 225190.0 252940.0 247800.0 True False 279108.0259353544 283664.5935229017 274705.60512659955 250742.1903546524 243450.51899955774 191924.60403206415 221131.85631191937 224408.86844974133 207012.472098511 245604.68478548265 1.1364116534631024 1.1549640992013712 1.1184868292171803 1.020917783281117 0.9912291339727236 0.7814370650124038 0.9003568336046258 0.9136994623931776 0.8428685807818403 1.0 17.90597855408759 -5.631421468904259 1.5897360073743174 0.8846970961018765 1.1435168895462402 0.7775821958597584 0.05680185111083413 0.1628270543720549 0.8458937295059737 0.01946767574561648 0.029612143468952135 2.336568572936171e-06 5.631421468904259 0.2588197934443637 KYT(ph)LENKEEGSLSDTEADAVSGQLPDPTTNPSAGK ddPTM_KYSE-520_SHP099_60min_R1 3 KYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK 35 2 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KY(0.005)T(0.315)LENKEEGS(0.315)LS(0.315)DT(0.05)EADAVSGQLPDPTTNPSAGK;KY(0.217)T(0.239)LENKEEGS(0.239)LS(0.239)DT(0.065)EADAVSGQLPDPTTNPSAGK;KY(0.003)T(0.329)LENKEEGS(0.329)LS(0.329)DT(0.012)EADAVSGQLPDPTTNPSAGK 167.08 2.7781e-10 319121000.0 253173.0 265402.0 237033.0 195232.0 245299.0 187574.0 191479.0 222238.0 298434.0 223926.0 True False 239128.98900213678 252651.6895434765 252312.52644620914 213786.79058135906 264602.63573960937 186403.28108895762 210835.56597495408 221467.10824873924 244245.90850892317 221942.18985179166 1.0774381795629848 1.1383671113283689 1.1368389516869153 0.9632543984725095 1.1922142244172027 0.8398731273825577 0.9499571312500145 0.997859435363012 1.1004933702421584 1.0 17.75982441553802 -6.249091247419945 24.962119318723055 0.9757728531741401 1.0979332741737935 0.3662207795295104 0.08146230900593347 880.9302116956857 1780828.0813493957 0.027274433000964705 0.02708422425425648 5.635192452048212e-07 6.249091247419945 0.12216042099965341 KYTELPHGAISEDQAVGPADIPCDST(ph)GQTST ddPTM_KYSE-520_SHP099_60min_R1 1 KYTELPHGAISEDQAVGPADIPCDSTGQTST 31 1 Q9H773;H3BPN2;H3BSA6 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 KYTELPHGAISEDQAVGPADIPCDS(0.066)T(0.233)GQT(0.233)S(0.233)T(0.233) 80.36 0.017154 730820000.0 429210.0 426580.0 400460.0 457020.0 386310.0 427080.0 392220.0 419000.0 435150.0 395750.0 True False 405400.86569107766 406086.45649036614 426274.2923586545 500455.04339192697 416710.39919677045 424414.43530271755 431869.42529831745 417546.5867953352 356137.7292388196 392243.96288884076 1.0335426521426552 1.0352905204699052 1.0867580707149282 1.2758769815247673 1.0623755586389059 1.0820164883531775 1.1010224915066602 1.0645073635299394 0.9079495490915857 1.0 18.58139171697153 -7.62548315384575 5.181392044841862 0.9560602295904442 1.097925773504497 0.40761306488163507 0.06766891870037942 0.21284144198820712 8.798935081472477 0.05137201604280389 0.018261164414824293 2.3687370126088558e-08 7.62548315384575 0.1418655439140527 KYTELPHGAISEDQAVGPADIPCDSTGQTS(ph)T ddPTM_KYSE-520_SHP099_60min_R1 3 KYTELPHGAISEDQAVGPADIPCDSTGQTST 31 1 Q9H773;H3BPN2;H3BSA6 Q9H773 DCTPP1 dCTP pyrophosphatase 1 1 KYTELPHGAISEDQAVGPADIPCDSTGQT(0.099)S(0.76)T(0.141);KYTELPHGAISEDQAVGPADIPCDST(0.001)GQT(0.152)S(0.828)T(0.02);KYTELPHGAISEDQAVGPADIPCDS(0.001)T(0.003)GQT(0.084)S(0.456)T(0.456) 213.22 1.8075999999999999e-22 2889020000.0 2629170.0 2989080.0 2819150.0 3130140.0 2731350.0 2858450.0 2657460.0 2669220.0 3348430.0 2858320.0 True False 2483324.698979546 2845480.1100994525 3000876.919799486 3427627.564489095 2946291.705744351 2840609.3532618084 2926101.9911102653 2659961.09882063 2740439.519051225 2832997.50853931 0.8765714376713112 1.0044061463247027 1.0592585806214614 1.209894309528135 1.0399909272293906 1.0026868518943466 1.0328643009004832 0.9389210865180402 0.9673286018751891 1.0 21.43389790227225 -7.1999269970489665 7.125063004880246 0.9649883302456834 1.0384368120515128 0.11896575683090693 0.07772293194056197 0.5343851209102322 53.64887960765865 0.04005228182714262 0.022904087249849766 6.310634144894754e-08 7.1999269970489665 0.07344848180582941 KYTGEDFDEDLR ddPTM_KYSE-520_SHP099_60min_R1 1 KYTGEDFDEDLR 12 1 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 121.76 0.00028754 520130000.0 968190.0 1032100.0 639460.0 478720.0 889050.0 903720.0 621330.0 722810.0 711300.0 805050.0 False True 914482.5706610847 982516.3667863157 680680.6147721756 524217.40486758307 959013.1769974595 898079.5482620873 684140.0999964394 720302.7408151227 582145.8504138178 797917.8833194226 1.146086069479657 1.231350227042091 0.8530710101902621 0.6569816466411097 1.2018945771811298 1.1255287881579763 0.8574066508577856 0.9027279070605453 0.729581154381488 1.0 19.60588075544121 -6.784059638602109 24.622693819386846 0.864322802608541 1.0267288338958576 0.17353957590210467 0.1736424419903845 410.18082525430606 446486.6898678071 0.07857225244580499 0.05301903689544611 1.6441459287325733e-07 6.784059638602109 0.16240603128731657 KYTLENKEEGS(ph)LSDTEADAVSGQLPDPTTNPSAGK ddPTM_KYSE-520_SHP099_60min_R1 5 KYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK 35 2 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KY(0.002)T(0.068)LENKEEGS(0.43)LS(0.43)DT(0.06)EADAVS(0.01)GQLPDPTTNPSAGK;KY(0.001)T(0.027)LENKEEGS(0.426)LS(0.426)DT(0.115)EADAVS(0.006)GQLPDPTTNPSAGK;KYT(0.057)LENKEEGS(0.314)LS(0.314)DT(0.314)EADAVSGQLPDPTTNPSAGK;KYT(0.002)LENKEEGS(0.459)LS(0.459)DT(0.081)EADAVSGQLPDPTTNPSAGK;KY(0.031)T(0.083)LENKEEGS(0.374)LS(0.374)DT(0.134)EADAVS(0.005)GQLPDPTTNPSAGK 263.76 1.0284e-41 14788892000.0 5422558.0 4999385.0 5620992.0 5001111.0 4805225.0 4251329.0 4582867.0 4983456.0 6909704.0 4816352.0 True False 5121757.898138616 4759207.040370132 5983330.138225184 5476415.0858011525 5183368.869509725 4224794.878760577 5046147.920831744 4966169.554283371 5655075.933063066 4773682.868345154 1.0729154071171312 0.9969675765285931 1.2533991685751353 1.1472096569539416 1.0858217884311598 0.8850179191365398 1.0570764879027337 1.040322470353994 1.1846358648083917 1.0 22.186671295889894 -6.0089961969050805 24.51916218674765 1.0316331638674545 1.118429617749145 0.16195365777351267 0.09082897195169216 647.3264341324233 1764296.2413985573 0.030138098659486464 0.03246113458326754 9.794985627907582e-07 6.0089961969050805 0.08679645388169055 KYTLENKEEGSLS(ph)DTEADAVSGQLPDPTTNPSAGK ddPTM_KYSE-520_SHP099_60min_R1 1 KYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK 35 2 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KY(0.058)T(0.066)LENKEEGS(0.066)LS(0.4)DT(0.4)EADAVS(0.011)GQLPDPTTNPSAGK 116.94 9.693200000000001e-05 222380000.0 94761.0 86964.0 85932.0 69311.0 95800.0 66945.0 78446.0 84361.0 113320.0 96342.0 True False 89504.41842862986 82786.11890437485 91471.31421606122 75898.296600888 103338.91497256237 66527.17142301307 86376.08723918165 84068.37138100539 92743.94456473191 95488.48483294169 0.9373320624494039 0.8669748928282841 0.9579303135460935 0.7948424015070826 1.0822133700556158 0.696703602946504 0.9045707175090034 0.8804032394909613 0.9712578927918756 1.0 16.543039145409235 -7.860300487330788 3.9401562983198803 0.9985064060648808 0.8887518944345902 0.14025654198956283 0.09549120356328508 0.4003590131642562 10.717211951828416 0.08502577672079574 0.022643706901796692 1.3794295103103855e-08 7.860300487330788 -0.1097545116302906 KYTLENKEEGSLSDT(ph)EADAVSGQLPDPTTNPSAGK ddPTM_KYSE-520_SHP099_60min_R1 1 KYTLENKEEGSLSDTEADAVSGQLPDPTTNPSAGK 35 2 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 KY(0.009)T(0.01)LENKEEGS(0.048)LS(0.184)DT(0.731)EADAVS(0.018)GQLPDPTTNPSAGK 83.22 0.00065095 1657700000.0 1707600.0 1764500.0 1561700.0 1434100.0 1498000.0 1383700.0 1321200.0 1430200.0 1995800.0 1468300.0 True False 1612876.023983792 1679730.7714315027 1662369.6808083465 1570396.432822113 1615884.0775459134 1375063.8150425446 1454759.789669412 1425238.970011189 1633413.0300237546 1455292.0043201144 1.1082834367232697 1.154222497234321 1.1422928703473327 1.0790936995189313 1.1103504126656867 0.9448714147817703 0.9996342901293194 0.9793491380288553 1.1223953853761843 1.0 20.47287722824295 -6.1520420804413565 6.773477380807031 1.0075932339493638 1.1210519462114314 0.5824422830783123 0.04642367463697885 0.18309709125763565 9.954956966898786 0.015504261009849567 0.015523621409326513 7.046247918878595e-07 6.1520420804413565 0.11345871226206761 KYVIS(ph)DEEEEDDD ddPTM_KYSE-520_SHP099_60min_R1 9 KYVISDEEEEDDD 13 1 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 KYVIS(1)DEEEEDDD;KYVIS(1)DEEEEDDD;KYVIS(1)DEEEEDDD;KYVIS(1)DEEEEDDD;KYVIS(1)DEEEEDDD;KYVIS(1)DEEEEDDD;KYVIS(1)DEEEEDDD;KYVIS(1)DEEEEDDD;KYVIS(1)DEEEEDDD 153.7 4.3504e-06 9589280000.0 11967840.0 10927710.0 9993460.0 10095420.0 10315750.0 10210900.0 9759520.0 10342120.0 12538370.0 10052640.0 True False 11303960.057902431 10402726.408772888 10637654.42170134 11054885.681501312 11127540.836411396 10147169.985558962 10746107.525336383 10306245.599588951 10261718.074586108 9963581.430435583 1.1345277937281082 1.04407501272543 1.0676536841668878 1.109529315205087 1.1168213873798718 1.018425960223758 1.0785386359678288 1.0343916664450232 1.0299226383838056 1.0 23.248232984628444 -7.34570394544568 0.6279389083072412 1.0011603129156808 1.0900709865176126 0.48533634341697474 0.03099476963870726 0.6787231978851505 0.5587127398849361 0.030136589569437093 0.01574814291022452 4.5112412691460285e-08 7.34570394544568 0.08891067360193183 KYYHIS(ph)S(ph)SAEK ddPTM_KYSE-520_SHP099_60min_R1 1 KYYHISSSAEK 11 1 A0A0C4DG90;A4D0S4-3;A4D0S4 A0A0C4DG90 LAMB4 Laminin subunit beta-4 2 KY(0.063)Y(0.063)HIS(0.625)S(0.625)S(0.625)AEK 66.289 0.022331999999999998 0.0 120130.0 104070.0 78751.0 73282.0 124310.0 124940.0 82515.0 107970.0 106050.0 111970.0 True False 113466.14942678195 99070.32098774533 83827.41546605501 80246.69924696322 134092.48977285207 124160.20311586017 90856.42146879464 107595.4772703875 86793.99330294572 110978.03291134194 1.0224199010395842 0.8927020815632096 0.7553514264667405 0.7230863364740899 1.2082795689843935 1.1187817972503549 0.8186883393525091 0.9695204938110888 0.7820826430784158 1.0 16.7599146109562 -4.251503196014197 22.415192377462116 0.9187245635220298 1.0224201530121482 0.04082706492642196 0.15078841250317332 1375.1169697732964 3101861.679896727 0.0399789306882929 0.4719894120935653 5.6039829332492895e-05 4.251503196014197 0.10369558949011837 KYYLHDDR ddPTM_KYSE-520_SHP099_60min_R1 1 KYYLHDDR 8 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 118.71 0.0019503 509280000.0 1126900.0 1168000.0 937120.0 819730.0 1215400.0 1228500.0 1007500.0 1063900.0 1117200.0 704810.0 False True 1064388.6105805445 1111887.5267962576 997528.2546450156 897636.8927391885 1311045.0653199612 1220832.4758110628 1109347.9322524485 1060209.579216126 914344.6423201412 698565.9317338829 1.5236766670522675 1.5916715606735725 1.427965792962577 1.2849708981816497 1.876766394928347 1.7476267025803605 1.5880361206550395 1.5176943664925393 1.3088881103186387 1.0 19.414036760288603 -8.00769298534213 1.9423707664067884 1.00198174412737 1.5783431671012187 0.5861473500262727 0.15175781980705594 0.26635780241901796 2.299823941243476 0.15764772945691755 0.04439464863709056 9.82442212886079e-09 8.00769298534213 0.5763614229738487 LAAAEETAVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 11 LAAAEETAVSPR 12 0 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 LAAAEETAVS(1)PR;LAAAEETAVS(1)PR;LAAAEETAVS(1)PR;LAAAEET(0.005)AVS(0.995)PR;LAAAEETAVS(1)PR;LAAAEETAVS(1)PR;LAAAEETAVS(1)PR;LAAAEETAVS(1)PR;LAAAEETAVS(1)PR;LAAAEETAVS(1)PR;LAAAEET(0.241)AVS(0.759)PR 214.14 1.0881999999999999e-10 19058440000.0 8149420.0 7950580.0 6819350.0 6069220.0 6347870.0 7680210.0 6854950.0 7938220.0 9023080.0 7857660.0 True False 7697355.427134001 7568622.202736127 7258936.21234578 6646036.844022466 6847411.254560343 7632274.960560744 7547915.24386492 7910684.16761447 7384716.125336583 7788047.24556698 0.988354998939612 0.9718254093854205 0.9320611423457434 0.8533637039510057 0.8792205592304214 0.9799985439103617 0.9691665966922909 1.0157468127992284 0.9482115211281009 1.0 22.89283020540324 -6.376674073772005 8.89110995685144 0.9831280474609884 0.9240305326847608 0.3383957256324278 0.04031551324698602 0.44392950606554576 31.572995130978107 0.015894915715691703 0.014003607476423412 4.2007411995781616e-07 6.376674073772005 -0.0590975147762276 LAACVNLIPQIT(ph)S(ph)M ddPTM_KYSE-520_SHP099_60min_R1 1 LAACVNLIPQITSM 14 0 H0YDR4 H0YDR4 CUTA 2 LAACVNLIPQIT(1)S(1)M 73.877 0.035995 175940000.0 140170.0 115950.0 123590.0 118500.0 114450.0 140340.0 112550.0 124760.0 158680.0 119240.0 True False 132394.4906780324 110379.58795550172 131556.80915099176 129762.20437167595 123456.56386857809 139464.08600352038 123927.65238214692 124327.23667920296 129867.71199727911 118183.6263673162 1.1202439352008766 0.9339668391325255 1.1131559691874027 1.0979710841531751 1.04461648083867 1.1800626727264591 1.0486025534279868 1.0519835995960416 1.0988638273262035 1.0 16.850670647050794 -2.029579565242136 7.454674905852639 1.070520591285827 1.1227780932558076 0.0 0.06554513481418947 0.0 0.0 0.014417500813984525 0.0 0.009341582094326851 2.029579565242136 0.05225750196998047 LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVK ddPTM_KYSE-520_SHP099_60min_R1 1 LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVK 36 1 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 0 338.33 7.740999999999999e-82 480400000.0 258490.0 296860.0 503620.0 118730.0 297890.0 250220.0 271470.0 200100.0 506930.0 375690.0 False True 244151.04441296012 282598.4000040559 536084.1510204909 130014.06350252392 321332.24823775166 248658.2841656038 298912.836891883 199405.89980369114 414884.29066536814 372361.6788823973 0.6556825212136562 0.7589352396633401 1.4396866848100176 0.34916069745078726 0.8629573515786992 0.6677869884783105 0.802748654987906 0.5355167062362218 1.1141970675140305 1.0 18.506345081890295 -7.786501018838071 24.99241588406111 1.0570989007708904 0.7699566162703391 0.16384914713765852 0.2684089118364797 488.7172330680535 487353.4024194805 0.2512878947306024 0.06498863118146857 1.634929315644338e-08 7.786501018838071 -0.28714228450055135 LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK ddPTM_KYSE-520_SHP099_60min_R1 1 LAADEDDDDDDEEDDDEDDDDDDFDDEEAEEKAPVKK 37 2 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 0 68.9 0.006247399999999999 7749700000.0 3458000.0 4482000.0 6445800.0 1967700.0 4263000.0 3866900.0 2386900.0 2769400.0 5799300.0 4610900.0 False True 3266177.846647905 4266677.99238084 6861306.581644653 2154709.616389422 4598473.846847951 3842765.242746275 2628191.145899125 2759793.5977828195 4746293.308456142 4570051.013225921 0.7146917697845052 0.933617147824585 1.5013632368189636 0.47148480622067485 1.0062193690048038 0.8408582818058593 0.5750901113123307 0.6038868252883524 1.0385646231782026 1.0 22.123778838790734 -5.28574068400348 24.999413180813683 0.7764319855657894 1.0382636210130674 0.17204190661225094 0.2586626022579647 1312.4467256647092 1350146.5663088532 0.07259110609044281 0.10772935395358782 5.179159858019471e-06 5.28574068400348 0.26183163544727794 LAAFADALEFADEEKES(ph)PVEFTGHK ddPTM_KYSE-520_SHP099_60min_R1 9 LAAFADALEFADEEKESPVEFTGHK 25 1 Q5SY16 Q5SY16 NOL9 Polynucleotide 5-hydroxyl-kinase NOL9 1 LAAFADALEFADEEKES(0.996)PVEFT(0.004)GHK;LAAFADALEFADEEKES(1)PVEFTGHK;LAAFADALEFADEEKES(1)PVEFTGHK;LAAFADALEFADEEKES(1)PVEFTGHK;LAAFADALEFADEEKES(0.998)PVEFT(0.002)GHK;LAAFADALEFADEEKES(0.998)PVEFT(0.002)GHK;LAAFADALEFADEEKES(1)PVEFTGHK;LAAFADALEFADEEKES(0.704)PVEFT(0.296)GHK;LAAFADALEFADEEKES(1)PVEFTGHK 277.24 1.4213e-38 4446813000.0 1710485.0 1518816.0 1425660.0 1434914.0 1469583.0 1428516.0 1292355.0 1394037.0 1835249.0 1351190.0 True False 1615600.987282689 1445849.799570707 1517560.3247366513 1571287.7951373763 1585230.8213165281 1419600.1017628934 1422998.8555693422 1389201.4110176829 1502014.0444624056 1339219.5078099133 1.2063750399848603 1.0796212205235654 1.1331677263411335 1.1732862207980936 1.1836975283528601 1.0600204772139483 1.06255833884651 1.0373216660273321 1.1215592632149733 1.0 20.352961017569722 -6.275623106354243 23.73390883278645 1.0590161860142675 1.1508065742629359 0.5757584059614187 0.042346479360953794 326.90970685904745 547022.4716388187 0.014681019424211699 0.01302110616001078 5.301233010641603e-07 6.275623106354243 0.09179038824866836 LAAFGQLHK ddPTM_KYSE-520_SHP099_60min_R1 1 LAAFGQLHK 9 0 Q12906;Q12906-5;Q12906-2;Q12906-3;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 0 104.44 0.0011658 0.0 159540.0 143860.0 100970.0 100200.0 164010.0 172120.0 116940.0 127890.0 133210.0 123720.0 False True 150689.99816489496 136948.74966173762 107478.68775771194 109722.97787377136 176916.65391075137 171045.73523532794 128761.43642441793 127446.37943975031 109022.42195082897 122623.9370527035 1.2288791388269382 1.1168190563223992 0.8764902705049981 0.8947924892234757 1.4427578999907087 1.3948804723323542 1.0500513971352636 1.0393270881930183 0.8890794454264779 1.0 16.90388110514889 -7.274125361195147 2.7594566594290058 0.9581196100313663 1.1471608029153253 0.17551078509577167 0.17551055454865824 0.5881581382653788 8.825558496916505 0.12519090538583683 0.0555085679043912 5.319546858193523e-08 7.274125361195147 0.18904119288395904 LAAGRPFNT(ph)YPR ddPTM_KYSE-520_SHP099_60min_R1 2 LAAGRPFNTYPR 12 1 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 LAAGRPFNT(1)YPR;LAAGRPFNT(1)YPR 190.06 2.3138999999999998e-07 1640390000.0 494730.0 565870.0 578910.0 485480.0 517310.0 398410.0 459900.0 456030.0 624740.0 562660.0 True False 467286.34068019607 538684.7558118138 616227.4648887503 531619.8732351151 558019.3539087297 395923.37540731457 506391.1801914641 454448.1383682024 511302.9644137895 557675.2701428557 0.8379183472856787 0.9659470029463969 1.1049933498591318 0.9532785506141124 1.0006169966363865 0.709953258830885 0.9080395120654094 0.8148974191589841 0.9168471183648016 1.0 19.089065771175974 LAAIVAK ddPTM_KYSE-520_SHP099_60min_R1 2 LAAIVAK 7 0 M0QYS1;P40429;M0QZU1;A0A096LPE0 M0QYS1 RPL13A 60S ribosomal protein L13a 0 ; 126.05 0.017936 250130000.0 787050.0 896950.0 895190.0 584470.0 866720.0 856170.0 870410.0 742130.0 1188080.0 998930.0 False True 743390.7675547231 853859.1756506016 952895.3797546427 640017.853072687 934925.9330377805 850826.3254498629 958399.5371829801 739555.7242444432 972354.621059535 990080.2573557793 0.7508388961720203 0.8624141015911325 0.9624425622823278 0.6464302750385018 0.9442930773457697 0.8593508648704664 0.9680018665785647 0.7469654290648969 0.9820967682523188 1.0 19.917185951342315 LAALALASSENSS(ph)S(ph)TPEECEEMSEKPK ddPTM_KYSE-520_SHP099_60min_R1 6 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 2 LAALALAS(0.001)S(0.027)ENS(0.129)S(0.614)S(0.614)T(0.614)PEECEEMSEKPK;LAALALAS(0.016)S(0.019)ENS(0.351)S(0.674)S(0.674)T(0.258)PEECEEMS(0.007)EKPK;LAALALAS(0.004)S(0.029)ENS(0.16)S(0.811)S(0.811)T(0.159)PEECEEMS(0.026)EKPK;LAALALAS(0.011)S(0.048)ENS(0.168)S(0.597)S(0.597)T(0.535)PEECEEMS(0.044)EKPK;LAALALAS(0.002)S(0.012)ENS(0.235)S(0.821)S(0.814)T(0.116)PEECEEMSEKPK;LAALALAS(0.082)S(0.322)ENS(0.276)S(0.581)S(0.565)T(0.174)PEECEEMS(0.001)EKPK 128.98 7.1474e-05 1226385000.0 1571270.0 1574970.0 1361440.0 1465260.0 1475720.0 1486760.0 1363800.0 1564060.0 1776860.0 1641760.0 True False 1484108.520850912 1499306.0771218345 1449200.6007810177 1604517.8698535177 1591850.7683017734 1477480.579354379 1501666.213405347 1558634.6409143466 1454227.0149954946 1627215.283669953 0.912054192057314 0.9213938021405272 0.890601640314336 0.9860513762105009 0.9782668490622703 0.9079810115980053 0.9228442164201851 0.957853983155239 0.8936906072536954 1.0 20.63397370425372 LAALALASSENSS(ph)ST(ph)PEECEEMSEKPK ddPTM_KYSE-520_SHP099_60min_R1 1 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 2 LAALALAS(0.01)S(0.061)ENS(0.083)S(0.51)S(0.53)T(0.805)PEECEEMSEKPK 118.05 0.00028437 410140000.0 568310.0 569410.0 501760.0 537970.0 544520.0 475640.0 498790.0 574700.0 633910.0 534950.0 True False 536784.7114021023 542054.6888981654 534104.252444385 589098.5070534213 587370.6261050077 472671.35433030035 549212.5609212881 572706.4998359886 518807.923570677 530210.7591848028 1.0123987529551586 1.0223381542305414 1.0073432935717268 1.1110647923462706 1.1078059355266348 0.8914782398173717 1.0358382047276833 1.0801487708708946 0.9784937679656717 1.0 19.016206420509707 LAALALASSENSS(ph)STPEECEEMSEKPK ddPTM_KYSE-520_SHP099_60min_R1 6 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 1 LAALALAS(0.011)S(0.04)ENS(0.125)S(0.398)S(0.398)T(0.027)PEECEEMSEKPK;LAALALASS(0.003)ENS(0.077)S(0.455)S(0.455)T(0.009)PEECEEMSEKPK;LAALALASS(0.001)ENS(0.135)S(0.723)S(0.135)T(0.006)PEECEEMSEKPK;LAALALASSENS(0.088)S(0.451)S(0.451)T(0.01)PEECEEMS(0.001)EKPK;LAALALAS(0.002)S(0.008)ENS(0.165)S(0.681)S(0.115)T(0.029)PEECEEMSEKPK;LAALALASSENS(0.006)S(0.963)S(0.03)T(0.001)PEECEEMSEKPK 263.01 4.4573e-41 1158600000.0 1385690.0 1464830.0 1197200.0 1121260.0 1156920.0 1302970.0 1165420.0 1365890.0 1606160.0 1563000.0 True False 1308823.0133954696 1394457.3680453452 1274373.427587727 1227824.2132808885 1247963.0220256483 1294837.6809178193 1283232.0270031237 1361152.0463911225 1314521.831998673 1549153.0359955984 0.8448636015836387 0.9001417778903719 0.8226259110474015 0.7925777407083603 0.8055776240490123 0.8358358734298077 0.8283442611455268 0.8786427259049634 0.8485422688752411 1.0 20.563048239834014 -8.794516926341107 0.7822123364760646 1.0028614465911907 0.8334405317675967 0.7344835242712349 0.029251588152498856 1.8806245107622215 1.4227603603657024 0.046247224569778575 0.011127181516691127 1.6050297019034016e-09 8.794516926341107 -0.169420914823594 LAALALASSENSSS(ph)T(ph)PEECEEMSEKPK ddPTM_KYSE-520_SHP099_60min_R1 5 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 2 LAALALAS(0.005)S(0.03)ENS(0.053)S(0.197)S(0.785)T(0.929)PEECEEMSEKPK;LAALALASS(0.001)ENS(0.004)S(0.032)S(0.963)T(1)PEECEEMSEKPK;LAALALAS(0.001)S(0.007)ENS(0.048)S(0.486)S(0.546)T(0.911)PEECEEMSEKPK;LAALALASSENS(0.002)S(0.035)S(0.972)T(0.99)PEECEEMS(0.002)EKPK;LAALALASS(0.002)ENS(0.007)S(0.502)S(0.67)T(0.818)PEECEEMSEKPK 166.03 3.5619e-10 1810530000.0 2469340.0 2395460.0 2047240.0 2194310.0 2160850.0 2005520.0 2056140.0 2337290.0 2717430.0 2336350.0 True False 2332360.787692752 2280378.5059412327 2179208.366099817 2402856.562656644 2330896.601445321 1993002.805770131 2263994.697192602 2329182.486517586 2224013.212835682 2315651.7566527943 1.007215692511602 0.9847674631514766 0.9410777591401731 1.037658860298537 1.006583392666332 0.860666030651758 0.977692215890501 1.00584316265428 0.9604264572365695 1.0 21.14298687674201 LAALALASSENSSS(ph)TPEECEEMSEKPK ddPTM_KYSE-520_SHP099_60min_R1 4 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 1 LAALALASSENS(0.001)S(0.162)S(0.818)T(0.02)PEECEEMSEKPK;LAALALASS(0.178)ENS(0.178)S(0.04)S(0.601)T(0.002)PEECEEMSEKPK;LAALALASSENS(0.001)S(0.026)S(0.947)T(0.026)PEECEEMSEKPK;LAALALASSENS(0.058)S(0.01)S(0.917)T(0.015)PEECEEMSEKPK 270.93 2.5371999999999997e-41 6916840000.0 3048730.0 3367180.0 2635890.0 2393260.0 2399980.0 3017700.0 2470560.0 3220920.0 3501090.0 3341450.0 True False 2879610.869407417 3205415.618559776 2805803.68697312 2620714.710840143 2588844.7719817385 2998865.414941021 2720308.3151420415 3209747.380288378 2865380.311296654 3311847.352608763 0.8694878002571975 0.9678633334458636 0.8472019958175219 0.7913150673372036 0.7816920577400673 0.9054962670845308 0.8213869860273715 0.969171292801294 0.8651909361219731 1.0 21.65920474798585 -8.132925136729963 0.8006628283659787 0.9965152413881386 0.8567310368852591 0.3157880290267432 0.06025114085729661 1.026464927053103 1.4382644124949726 0.061687924073895783 0.02238035862085619 7.363340151131665e-09 8.132925136729963 -0.13978420450287954 LAALALASSENSSST(ph)PEECEEMSEKPK ddPTM_KYSE-520_SHP099_60min_R1 1 LAALALASSENSSSTPEECEEMSEKPK 27 1 O00567 O00567 NOP56 Nucleolar protein 56 1 LAALALAS(0.003)S(0.012)ENS(0.049)S(0.21)S(0.271)T(0.456)PEECEEMSEKPK 91.66 0.014702000000000002 355140000.0 143740.0 141430.0 109630.0 110360.0 121870.0 144850.0 101010.0 154070.0 177440.0 146510.0 True False 135766.45566141387 134635.49050924196 116696.925214202 120848.5812190561 131460.47565455298 143945.93742062055 111221.07656260025 153535.56713020848 145221.36889839402 145212.03538305522 0.9349531896806981 0.9271648190460704 0.8036312204175561 0.8322215228253588 0.9053001378830139 0.9912810397630277 0.7659218898021082 1.0573198476641181 1.0000642750810165 1.0 17.14780150537294 -7.284431194590502 24.987343827566654 1.021519062130577 0.8823469223823632 0.49341596365069795 0.06452762861840104 707.3485063055782 768736.9597553171 0.03551376289661684 0.017076435541347 5.1947996836038064e-08 7.284431194590502 -0.13917213974821374 LAALKDEPQTVPDVPSFGES(ph)PPLS(ph)PIDMDTQER ddPTM_KYSE-520_SHP099_60min_R1 2 LAALKDEPQTVPDVPSFGESPPLSPIDMDTQER 33 1 P17535;U3KPR5 P17535 JUND Transcription factor jun-D 2 LAALKDEPQTVPDVPS(0.001)FGES(0.999)PPLS(1)PIDMDTQER;LAALKDEPQTVPDVPS(0.018)FGES(0.981)PPLS(0.999)PIDMDT(0.001)QER 124.17 6.316899999999999e-05 95072000.0 71440.0 64745.0 76928.0 60528.0 67424.0 63513.0 69522.0 61187.0 93165.0 78160.0 True False 67477.08078789078 61634.55301577372 81886.90196915189 66280.5629215932 72729.88520991709 63116.59180804889 76549.96222933465 60974.75657815312 76248.58449852848 77467.56320755978 0.871036573166741 0.7956175522216378 1.057047602617257 0.8555911684482301 0.9388430744239499 0.8147486405237744 0.988155029792707 0.7871004850737685 0.9842646566051745 1.0 16.24130473902801 -7.96908169310125 24.835439521512388 1.0000002712286853 0.8920558527061565 0.2049931605338603 0.081676334915999 229.21565946020004 184119.50049075254 0.07361678288412457 0.019007771613857742 1.0737874082218521e-08 7.96908169310125 -0.10794441852252878 LAAPSVSHVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 LAAPSVSHVSPR 12 0 A0A0U1RQJ8;Q8WXE1-5;Q8WXE1-3;Q8WXE1-2;Q8WXE1;A0A0U1RRM7;A0A0U1RQW3 A0A0U1RQJ8 ATRIP ATR-interacting protein 1 LAAPSVSHVS(1)PR;LAAPSVSHVS(0.999)PR;LAAPSVSHVS(1)PR;LAAPS(0.007)VS(0.001)HVS(0.993)PR 128.74 0.00030731 409730000.0 951020.0 958560.0 1387100.0 1329060.0 762540.0 943250.0 743725.0 800650.0 911450.0 947790.0 True False 898265.0247886318 912509.3387721056 1476514.68543847 1455373.462803541 822547.5597408947 937362.826869179 818907.9810565276 797872.7320231145 745953.6557847231 939393.3179694623 0.956218239587087 0.9713815516002738 1.5717747371569748 1.549269549787081 0.8756157234744499 0.9978385080440297 0.8717413306990849 0.8493489540118825 0.7940802233904889 1.0 19.84136980598588 -5.793245820521753 24.981872032150928 0.8942399250177548 1.2635063868746241 0.4483420544390282 0.19780573543951374 196.7765235077079 154554.0103471498 0.06779910658714729 0.07688348970151625 1.6097342311991175e-06 5.793245820521753 0.3692664618568693 LAAQLGAPTS(ph)PIPDSAIVNTR ddPTM_KYSE-520_SHP099_60min_R1 2 LAAQLGAPTSPIPDSAIVNTR 21 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 LAAQLGAPT(0.054)S(0.946)PIPDSAIVNTR;LAAQLGAPT(0.025)S(0.975)PIPDSAIVNTR 307.54 1.2801e-53 1182970000.0 400870.0 525330.0 346700.0 312690.0 338280.0 584810.0 434530.0 574090.0 662900.0 575810.0 True False 378632.94198546646 500092.35826359375 369048.83673961303 342407.9635863233 364900.7114500877 581159.9838657457 478456.53300412564 572098.6157836136 542534.0703491073 570708.7713734007 0.6634433549606972 0.8762654147756135 0.646650017050734 0.5999696881516724 0.6393816421849633 1.0183126894426282 0.8383549666719303 1.0024352953378801 0.9506320869109975 1.0 19.12239521078158 -6.25954908208967 24.999798526831498 0.9543747153927506 0.6888897423556737 0.7324128090992512 0.08357831111350074 99.09513747473862 1310570.4637582684 0.029617660300576432 0.028201858313368987 5.501117457399934e-07 6.25954908208967 -0.26548497303707697 LAAT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 LAATPK 6 0 P07305-2;P07305 P07305-2 H1F0 Histone H1.0;Histone H1.0, N-terminally processed 1 LAAT(1)PK;LAAT(1)PK;LAAT(1)PK 99.44200000000001 0.05842000000000001 4171700000.0 15926700.0 15719000.0 12253900.0 9936600.0 10509200.0 15702400.0 13052700.0 12815000.0 14727500.0 19681800.0 True False 15043214.20191068 14963835.645299964 13043806.00093321 10880971.476452274 11336214.250831466 15604395.497090451 14372194.298075967 12770547.756043483 12053357.250062566 19507434.564208698 0.7711528726340697 0.7670837288238244 0.6686581958278285 0.5577858759765447 0.5811227618638591 0.7999204326806071 0.7367547101475546 0.6546502931489653 0.6178853098488658 1.0 24.217520724841563 -11.234458492519483 2.2883611477476475 2.0896358952429543 0.6832652492241575 0.589184194324188 0.07918599233524133 4420463.206404516 755424.7727981715 24953791.586526383 0.02171952087364337 5.8282947577369235e-12 11.234458492519483 -1.4063706460187968 LACRT(ph)PS(ph)PARPALR ddPTM_KYSE-520_SHP099_60min_R1 1 LACRTPSPARPALR 14 2 Q9H211 Q9H211 CDT1 DNA replication factor Cdt1 2 LACRT(1)PS(1)PARPALR 75.548 0.060763 230170000.0 273590.0 267720.0 252370.0 237040.0 227440.0 257280.0 247500.0 283360.0 322090.0 288690.0 True False 258413.4173118564 254858.32934408728 268638.17400627723 259568.21033132513 245338.23404341956 255674.22008682953 272519.71536722657 282377.090296721 263606.57522815483 286132.43119742133 0.9031252285189588 0.890700604183676 0.938859579398486 0.9071610975556705 0.8574289639825721 0.8935520486680634 0.9524251208671887 0.9868755146524818 0.9212747192794638 1.0 18.126323501199682 -6.833793843563751 4.679906316066837 0.9659852656757388 0.8984489309193544 0.602266179889227 0.02671168223322353 0.15395407627251623 6.326413080954416 0.011641083774929934 0.00782301986843852 1.4662436910160564e-07 6.833793843563751 -0.06753633475638443 LACSLPLEGWS(ph)PALK ddPTM_KYSE-520_SHP099_60min_R1 2 LACSLPLEGWSPALK 15 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 LACSLPLEGWS(1)PALK;LACSLPLEGWS(1)PALK 232.74 1.3811000000000003e-18 210295000.0 256980.0 314410.0 225020.0 191141.0 238040.0 294710.0 217230.0 258960.0 365500.0 290150.0 True False 242724.80712307038 299305.2716609685 239525.14924472998 209306.9831713627 256772.39373767 292870.60557287623 239189.72836049568 258061.72820171813 299134.413505202 287579.49673328386 0.8440268165160117 1.0407740296539976 0.8329006482227697 0.727823038669147 0.8928744804634458 1.018398769382713 0.8317342893966208 0.8973578823703762 1.0401799046982643 1.0 18.13360129550034 -6.01042793033123 24.934660670963826 0.9446321140437777 0.8644341228179743 0.1935455777704621 0.09153493516204642 1046.8061462162082 2503066.810021032 0.03078656689058977 0.03285369325270207 9.762747784149206e-07 6.01042793033123 -0.0801979912258034 LADALQELR ddPTM_KYSE-520_SHP099_60min_R1 2 LADALQELR 9 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;H0YAB0 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ; 99.815 0.019227 299243000.0 267271.0 350688.0 255264.0 186531.0 294534.0 356672.0 247975.0 300827.0 298685.0 325754.0 False True 252444.94483847043 333840.4220865802 271718.7258768404 204258.85015741008 317712.15013077966 354445.87774723937 273042.73300278 299783.5013505498 244451.3332361186 322868.0729927768 0.7818826510112015 1.0339840015523891 0.841578181943432 0.6326387377484046 0.9840308680440122 1.0978040487613312 0.8456789501416218 0.928501534920291 0.757124515193509 1.0 18.300585260658764 LADAMAES(ph)PSRDVVGSGTDTALDVAVK ddPTM_KYSE-520_SHP099_60min_R1 1 LADAMAESPSRDVVGSGTDTALDVAVK 27 1 Q9H6U6-7;Q9H6U6-3;Q9H6U6-8 Q9H6U6-7 BCAS3 Breast carcinoma-amplified sequence 3 1 LADAMAES(0.975)PS(0.025)RDVVGSGTDTALDVAVK 174.6 1.3808e-10 388340000.0 146600.0 191390.0 107380.0 120130.0 107210.0 183470.0 98620.0 139080.0 178940.0 156060.0 True False 138467.80576014542 182195.33711775296 114301.88661407473 131547.11908159833 115646.81705854305 182324.89567525886 108589.47203844796 138597.56394151598 146449.00671031693 154677.42981284278 0.8952036889136913 1.1779051238322644 0.7389693942573147 0.8504609834852328 0.7476644601508692 1.1787427286312493 0.7020382493414811 0.8960425842944043 0.9468026905251651 1.0 17.238903171723774 -4.7621539598647065 24.999970562809374 0.8770397343402497 1.0365543661836203 0.14710876171765908 0.14780574404324862 31.57709898703949 1104933.9754681534 0.03661482501002926 0.08430863079054678 1.7292032381580283e-05 4.7621539598647065 0.15951463184337056 LADFGVLHR ddPTM_KYSE-520_SHP099_60min_R1 2 LADFGVLHR 9 0 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 0 ; 125.98 0.0011104 877550000.0 1917090.0 1748700.0 1272980.0 1265500.0 1930550.0 1815500.0 1250270.0 1418960.0 1414500.0 1413710.0 False True 1810745.19607583 1664689.8271477877 1355038.3276400138 1385772.7395135516 2082473.301673075 1804168.791074469 1376659.4930593232 1414037.958947755 1157662.456643252 1401185.6292497385 1.2922950095094745 1.1880580220046517 0.9670655331838979 0.9890001086119904 1.486222280760994 1.2876015521515924 0.9824961549145006 1.0091724675372942 0.826202062365655 1.0 20.418216666176235 -6.855478001358678 6.329678768449125 0.9504347239061929 1.1932056176492565 0.4011776022810123 0.1480494785820111 0.2577238879708036 14.439612767929615 0.06871130088265626 0.04619750073536778 1.394832309328717e-07 6.855478001358678 0.2427708937430636 LADS(ph)PPPQVWQLISK ddPTM_KYSE-520_SHP099_60min_R1 1 LADSPPPQVWQLISK 15 0 Q5HY81;P11441 Q5HY81 UBL4A Ubiquitin-like protein 4A 1 LADS(1)PPPQVWQLISK 152.94 3.6680000000000003e-06 304540000.0 240740.0 239810.0 208690.0 184250.0 163030.0 232760.0 192980.0 219850.0 267060.0 236820.0 True False 227385.67229670793 228289.1676378513 222142.49131580617 201761.06460321735 175859.53348618842 231307.258502062 212488.30170330266 219087.3916633755 218568.63603474502 234721.95904317225 0.968744778816732 0.9725939940534589 0.9464069413077268 0.8595747301431972 0.7492248880465534 0.9854521470635724 0.9052766199187177 0.9333911175437954 0.9311810319142055 1.0 17.840593291673887 -9.307528404057276 12.829605294050406 1.000000026518588 0.9149252701323795 0.12472316751939316 0.06588322236087835 0.0 0.0 0.06780777705517417 0.016445801590400988 4.92574126589232e-10 9.307528404057276 -0.08507475638620854 LADSGDGAGPS(ph)PEEKDFLK ddPTM_KYSE-520_SHP099_60min_R1 7 LADSGDGAGPSPEEKDFLK 19 1 Q92917 Q92917 GPKOW G patch domain and KOW motifs-containing protein 1 LADSGDGAGPS(1)PEEKDFLK;LADSGDGAGPS(1)PEEKDFLK;LADSGDGAGPS(1)PEEKDFLK;LADSGDGAGPS(1)PEEKDFLK;LADSGDGAGPS(1)PEEKDFLK;LADSGDGAGPS(1)PEEKDFLK;LADSGDGAGPS(1)PEEKDFLK 242.43 2.4006e-26 7271130000.0 13320860.0 11905810.0 11129820.0 9696020.0 10463990.0 10895830.0 10335320.0 10683660.0 13988990.0 10947600.0 True False 12581925.34132394 11333837.016614866 11847266.005541632 10617526.825585276 11287446.48104118 10827825.083367087 11380115.008602837 10646600.87704499 11448942.04974046 10850612.78110391 1.159558966405572 1.0445342807138485 1.0918522524528171 0.9785186366686545 1.0402588967784385 0.9978998699707994 1.0487992925543377 0.9811981214172344 1.0551424404047047 1.0 23.371273184420097 -1.000000011977399 0.7370536030291245 1.0162346302529586 23.706682146278684 0.6237261149373536 0.03241222810078495 213.65750424029852 0.9717852871034126 0.011177201107637532 8035.156190381525 0.09999999724210198 1.000000011977399 22.690447516025724 LADVDKDGLLDDEEFALANHLIK ddPTM_KYSE-520_SHP099_60min_R1 2 LADVDKDGLLDDEEFALANHLIK 23 1 A0A024R571;Q9H4M9 A0A024R571 EHD1 EH domain-containing protein 1 0 ; 244.72 1.9505e-28 521270000.0 719420.0 627980.0 395890.0 411700.0 683930.0 607060.0 475430.0 440300.0 558430.0 432540.0 False True 679512.3384717854 597810.8981828028 421409.7028463957 450827.84421788144 737751.3999706116 603271.1133625266 523491.10414965847 438772.70206679235 457033.18887471943 428708.03211102774 1.5850235768286325 1.3944476273026312 0.9829759913088312 1.0515964489816814 1.7208714199680473 1.4071840697547047 1.22109003083498 1.0234767468810988 1.0660709728815063 1.0 18.709635921631804 -7.08969865391699 3.317367098204542 1.033669674731125 1.343432633767809 0.3325596246001684 0.2064290795291795 0.355057341615318 7.394417346725629 0.11725092021834113 0.06429374806207033 8.13394714656318e-08 7.08969865391699 0.30976295903668416 LAEDDWTGMES(ph)EEENKKDDEEMDIDTVK ddPTM_KYSE-520_SHP099_60min_R1 5 LAEDDWTGMESEEENKKDDEEMDIDTVK 28 2 H3BUB4;O95149;H3BTA6;H3BSK1;H3BRI5 H3BUB4 SNUPN Snurportin-1 1 LAEDDWTGMES(1)EEENKKDDEEMDIDTVK;LAEDDWT(0.061)GMES(0.939)EEENKKDDEEMDIDTVK;LAEDDWT(0.006)GMES(0.994)EEENKKDDEEMDIDTVK;LAEDDWT(0.039)GMES(0.961)EEENKKDDEEMDIDTVK;LAEDDWT(0.269)GMES(0.731)EEENKKDDEEMDIDTVK 230.63 1.6021e-23 4009040000.0 1551304.0 1259466.0 1082509.0 1264425.0 1335137.0 1219273.0 1287976.0 1277686.0 1520651.0 1158389.0 True False 1465250.0746721448 1198959.3628629919 1152289.2622156395 1384595.5718367607 1440204.6860096252 1211663.0649406463 1418177.1835144197 1273254.0054801544 1244539.1108921983 1148126.5746730051 1.2762095286309862 1.0442745506561106 1.0036256346943453 1.2059607384587399 1.2543953931384317 1.0553392732728417 1.2352097885360132 1.1089840036520247 1.0839737868158414 1.0 20.13085026934028 -7.9966995383071575 1.9757655404606544 1.0016488576617883 1.1462482319286529 0.21595780661318087 0.08940164822612344 0.5603333329998806 5.009894167899948 0.08655666111024621 0.024330950122187476 1.0076285440977431e-08 7.9966995383071575 0.14459937426686453 LAEDEGDS(ph)EPEAVGQSR ddPTM_KYSE-520_SHP099_60min_R1 2 LAEDEGDSEPEAVGQSR 17 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 LAEDEGDS(1)EPEAVGQSR;LAEDEGDS(1)EPEAVGQSR 258.9 4.4339e-28 1232920000.0 3620600.0 3170000.0 3208600.0 2586800.0 2859700.0 3026100.0 2892600.0 3469600.0 4012000.0 3291300.0 True False 3419758.1005128413 3017708.441732996 3415431.489941518 2832648.6942502228 3084742.120532747 3007212.9874252016 3185012.2370555107 3457564.767410728 3283521.9342896575 3262141.6425926546 1.0483168651729413 0.9250697156529997 1.0469905553294838 0.8683401901576894 0.9456186942517567 0.9218523647658526 0.9763562058342005 1.0599063885720048 1.0065540660214896 1.0 21.63738799473067 -7.059579877133144 6.8300729473386586 1.0241748385117029 0.9563652001120392 0.21324237691064563 0.05373946161954013 0.35837908408870633 34.20899447012993 0.024673218942684837 0.014290006807557609 8.718065404849074e-08 7.059579877133144 -0.0678096383996637 LAEQAER ddPTM_KYSE-520_SHP099_60min_R1 2 LAEQAER 7 0 P31947;P31947-2;I3L0W5;F8WEB6;A2IDB1;P31946-2;P31946;Q4VY20;Q4VY19;A0A0J9YWE8;P61981;Q04917;P27348;E9PG15;P62258;B4DJF2;I3L3T1;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1 P31947;P31946-2;P61981;P27348;P62258;P63104 SFN;YWHAE;YWHAH;YWHAB;YWHAG;YWHAQ;YWHAZ 14-3-3 protein sigma;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein eta;14-3-3 protein theta;14-3-3 protein epsilon;14-3-3 protein zeta/delta 0 ; 118.05 0.019835 1263350000.0 1275880.0 1553690.0 1065700.0 705060.0 1245150.0 1504280.0 1004370.0 1262600.0 1328120.0 1384090.0 False True 1205104.3929962781 1479048.400263765 1134396.727180288 772068.6904159811 1343136.2210656183 1494891.2305356662 1105901.5213065906 1258220.3352930548 1086966.8871806527 1371828.0394057247 0.8784660747409193 1.0781587471447864 0.8269234150307265 0.5628028209355167 0.9790849745624564 1.0897074469940506 0.8061517111034315 0.9171851712829221 0.7923492274232318 1.0 20.38766821829485 LAES(ph)PQLSK ddPTM_KYSE-520_SHP099_60min_R1 7 LAESPQLSK 9 0 Q96A19 Q96A19 CCDC102A Coiled-coil domain-containing protein 102A 1 LAES(1)PQLSK;LAES(1)PQLSK;LAES(1)PQLSK;LAES(1)PQLSK;LAES(1)PQLSK;LAES(1)PQLSK;LAES(1)PQLSK 193.22 4.0925999999999996e-06 5508860000.0 8534980.0 8328140.0 6926730.0 5837160.0 6201790.0 7991020.0 6670220.0 7724530.0 9835510.0 8468430.0 True False 8061527.645339183 7928043.6536070015 7373238.098959852 6391921.931393852 6689835.589641847 7941145.080061634 7344510.932673864 7697735.408348863 8049629.3170302315 8393406.298538845 0.9604595987141196 0.9445561636861478 0.8784559970894549 0.7615408695879028 0.7970346426344734 0.9461170825775534 0.8750334097316871 0.9171169766545095 0.9590420183080546 1.0 23.000824988177484 -7.749978272437535 1.1862018015744304 1.000008694840574 0.8748021325777755 0.3107070886789882 0.0600139518363826 0.6053993233970337 1.742174321607222 0.06316918725147141 0.020646069746308057 1.7783683788034377e-08 7.749978272437535 -0.12520656226279847 LAGGQTSQPTTPLT(ph)SPQR ddPTM_KYSE-520_SHP099_60min_R1 1 LAGGQTSQPTTPLTSPQR 18 0 O95155-2;O95155;O95155-4;B1AQ61 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 LAGGQTSQPTTPLT(0.607)S(0.392)PQR 82.259 0.020281999999999998 444420000.0 342140.0 436780.0 288610.0 285710.0 308500.0 535220.0 384760.0 579350.0 492370.0 604000.0 True False 323160.8121608191 415796.4331798535 307214.26239232713 312863.7924981561 332777.19487510977 531879.4934502214 423655.29569573386 577340.3700713068 402968.01963763736 598649.0299048892 0.5398168142227868 0.6945579336291808 0.5131792536958358 0.5226163860114541 0.5558802875333816 0.8884663081049745 0.7076855962884336 0.9644054215924015 0.6731289946325633 1.0 19.19135091615943 -6.256004022698125 24.811512925827575 0.8358218768947032 0.5671391872369465 0.6399171677386442 0.10542783128213155 263.1634878032518 1201299.302959336 0.03323765409086834 0.03231543447416196 5.546205757029472e-07 6.256004022698125 -0.26868268965775677 LAGGQTSQPTTPLTS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 2 LAGGQTSQPTTPLTSPQR 18 0 O95155-2;O95155;O95155-4;B1AQ61 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 LAGGQTSQPTTPLT(0.118)S(0.882)PQR;LAGGQTSQPTTPLT(0.02)S(0.98)PQR 264.23 7.382199999999999e-30 880630000.0 987770.0 1083180.0 738390.0 774340.0 872370.0 1449270.0 1055100.0 1447470.0 1301620.0 1543800.0 True False 932976.4290293237 1031142.4069136721 785987.8008657722 847933.0407861908 941020.5558936781 1440224.5683505905 1161759.8047836795 1442449.0644120385 1065278.619170018 1530123.1330582262 0.6097394444096813 0.6738950510817705 0.5136761766975146 0.5541600035099424 0.614996620574502 0.9412474965148999 0.7592590293447127 0.9427012985086008 0.6962045054771946 1.0 20.545216324401945 -6.198706299310076 6.726214952238206 0.8572293735230966 0.5896543992714299 0.6879428200365341 0.09235235994912963 0.14278045505434392 12.773920432919086 0.028998965922104398 0.028924344318089004 6.328396777110481e-07 6.198706299310076 -0.26757497425166665 LAGLTVS(ph)SPLKR ddPTM_KYSE-520_SHP099_60min_R1 1 LAGLTVSSPLKR 12 1 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 LAGLTVS(0.662)S(0.338)PLKR 154.47 7.3128e-06 1592400000.0 669720.0 704660.0 548230.0 408440.0 526710.0 628990.0 498780.0 633490.0 673460.0 613760.0 True False 632569.2965462791 670807.0758837755 583569.7829990137 447258.01479803585 568159.0804300453 625064.2400980067 549201.5500236981 631292.5710476777 551176.640545043 608322.5638980542 1.039858348328977 1.1027160846793655 0.9593097768058646 0.7352316704020692 0.9339766665720134 1.027521050826512 0.9028130511952145 1.0377595843271612 0.9060598328182548 1.0 19.214476992077756 -4.847722855675395 5.885885410773439 0.9324642259298 1.0703426729561174 0.2989813990736261 0.08208842312017771 0.23740161954259362 12.592174111765933 0.02244494218741088 0.048337823532412276 1.4199633799677658e-05 4.847722855675395 0.13787844702631735 LAGLTVSS(ph)PLKR ddPTM_KYSE-520_SHP099_60min_R1 1 LAGLTVSSPLKR 12 1 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 LAGLTVS(0.077)S(0.923)PLKR 140.31 2.3244e-05 1012500000.0 556440.0 531680.0 421460.0 320820.0 471460.0 540650.0 400550.0 375930.0 491600.0 474380.0 True False 525573.16396436 506137.2947320497 448627.9859598429 351310.6363419499 508561.2197595442 537275.6028060652 441041.502991283 374625.9865727215 402337.83222751634 470177.3622620552 1.1178189469518307 1.0764816330096982 0.9541675588153866 0.7471874754917391 1.0816369748488561 1.1427083605667356 0.9380321946369395 0.7967758906349094 0.8557150227136451 1.0 18.842845553328882 -6.998623327838836 24.991014445316942 0.8692280675279388 1.0125090491362538 0.21783232661067686 0.11543209365206476 69.96352829088072 1270047.296969106 0.05227256319102683 0.03493627693840334 1.0031749342573442e-07 6.998623327838836 0.14328098160831504 LAGS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 1 LAGSPIR 7 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6;F8W8U2 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 LAGS(1)PIR 92.051 0.016345 0.0 214940.0 210890.0 183670.0 149410.0 172490.0 190200.0 173010.0 156520.0 218410.0 163650.0 True False 203016.849727733 200758.52784765625 195509.6620823906 163609.8814782454 186063.98166615114 189012.8912488924 190499.5392148844 155977.06865204277 178752.2496680472 162200.1883177734 1.2516437362575308 1.2377206828782563 1.205360265669724 1.0086910698137428 1.1471255588287306 1.1653062379840713 1.174471751177431 0.9616330922283601 1.1020471154931457 1.0 17.30741596899175 -1.0000000000003908 0.17272382374670825 0.9933450924462084 2.0984274044449758 0.508721954392368 0.06872183124806923 51.69945619606501 0.5652233103483705 0.18056908372289504 14.831622693176687 0.09999999999991002 1.0000000000003908 1.1050823119987674 LAGS(ph)PPGSGQWKPK ddPTM_KYSE-520_SHP099_60min_R1 2 LAGSPPGSGQWKPK 14 1 H3BLU1;Q4KMQ1 H3BLU1 TPRN Taperin 1 LAGS(0.999)PPGS(0.001)GQWKPK;LAGS(0.996)PPGS(0.004)GQWKPK 155.2 7.4771e-07 5741700000.0 4331100.0 4128100.0 3863500.0 3587300.0 3596400.0 3443900.0 3481200.0 3740100.0 4694500.0 3796800.0 True False 4090845.2491662046 3929779.8795955777 4112547.3918185597 3928235.913438927 3879416.2192831268 3422405.342650156 3833113.669237932 3727126.4660459002 3842097.138714562 3763163.3058656976 1.0870761953885297 1.0442756692142945 1.092843190038623 1.043865385091295 1.030892338165666 0.9094490630570304 1.0185881817202038 0.9904237906009483 1.0209753939526964 1.0 21.843514467140935 -5.844507197706186 2.8975410545734386 0.9881773786257371 1.0692507687888952 0.5605530110257458 0.032768505835969484 0.19230439479659553 3.267124666417101 0.010561252552461427 0.012573602326696628 1.430516272203968e-06 5.844507197706186 0.08107339016315818 LAGSPPGS(ph)GQWKPK ddPTM_KYSE-520_SHP099_60min_R1 1 LAGSPPGSGQWKPK 14 1 H3BLU1;Q4KMQ1 H3BLU1 TPRN Taperin 1 LAGS(0.144)PPGS(0.856)GQWKPK 53.034 0.048378 660770000.0 1078200.0 973280.0 914080.0 891560.0 1108800.0 948370.0 887970.0 992340.0 1098100.0 991480.0 True False 1018390.096661586 926522.1678769367 973003.0593797117 976293.5943427107 1196056.2517909938 942450.871050011 977734.6733520654 988897.8041538965 898712.7208483245 982696.2585597672 1.0363223506662491 0.9428367715929246 0.9901361187695354 0.9934845948976745 1.217116928422955 0.9590459542720357 0.9949510490505241 1.0063107450955582 0.9145376437735416 1.0 19.906386037508145 -9.40534433785558 8.599964205670023 0.9999978696906917 1.0078855490398764 6.659597992519917e-05 0.07785185530507809 0.0 0.0 0.07657715305837819 0.018572687680516696 3.932381661718542e-10 9.40534433785558 0.007887679349184662 LAHEVGWK ddPTM_KYSE-520_SHP099_60min_R1 4 LAHEVGWK 8 0 M0QYS1;P40429;Q8J015 M0QYS1 RPL13A;RPL13a 60S ribosomal protein L13a 0 ;;; 125.58 0.0014786 8998380000.0 11391240.0 9578200.0 6638380.0 5925910.0 9933250.0 9433830.0 7264320.0 8168690.0 7640590.0 7667700.0 False True 10759345.209326033 9118048.894828686 7066300.5965835415 6489106.704710195 10714940.262538696 9374949.967668438 7998668.3585311165 8140354.72097657 6253251.459599766 7599770.143380336 1.4157461352561822 1.199779562118839 0.9298045155666366 0.8538556538269032 1.4099032023845854 1.233583357232764 1.0524881947249727 1.071131701011655 0.8228211303267593 1.0 22.857524353930383 -4.41929312520719 3.5043447603018048 1.0620245335620284 1.4121176582146857 0.3185345146735483 0.1657191337301307 0.338782526787044 6.972823759432784 0.045079108219350246 0.23819306388544229 3.8080871142056354e-05 4.41929312520719 0.3500931246526573 LAHGGQVNLDMEDHRDEDFVKPK ddPTM_KYSE-520_SHP099_60min_R1 5 LAHGGQVNLDMEDHRDEDFVKPK 23 2 F2Z2K0;Q9UNZ2;Q9UNZ2-5;Q9UNZ2-4;Q9UNZ2-6 F2Z2K0 NSFL1C NSFL1 cofactor p47 0 ;;;; 336.41 1.0910999999999997e-72 13621600000.0 14017230.0 12081520.0 8411714.0 7821507.0 11558090.0 11316990.0 8906700.0 11109480.0 10551999.0 8892106.0 False True 13239666.30924474 11501105.64446877 8953946.543658266 8564860.67365818 12467645.926463714 11246356.467585696 9807076.157015266 11070943.806852117 8636021.97584809 8813328.858793791 1.5022321896038662 1.3049672636455816 1.0159551160653864 0.9718076802628675 1.4146352787033138 1.2760622742863237 1.1127550456976232 1.2561591634931126 0.9798819622203491 1.0 23.071255607877855 -4.477620342606693 3.8897407850009844 1.146766897997564 1.482192950981922 0.4037542215474935 0.14167521275803646 0.2435458410724953 7.365789934146903 0.03737523496091773 0.16232396440999358 3.3295048924662016e-05 4.477620342606693 0.335426052984358 LAHYIDR ddPTM_KYSE-520_SHP099_60min_R1 1 LAHYIDR 7 0 Q03252 Q03252 LMNB2 Lamin-B2 0 80.229 0.025194 204330000.0 307340.0 256190.0 202200.0 168590.0 289190.0 281070.0 206410.0 231620.0 227230.0 226950.0 False True 290291.23753289925 243882.24785097028 215234.13553143863 184612.7429115684 311947.60773398075 279315.7378723774 227275.93716747162 230816.56428051417 185970.7600021534 224939.39956442808 1.290530863401513 1.0842131183919894 0.9568538724128246 0.8207221290225364 1.386807328276127 1.241737723196752 1.0103874092647531 1.0261277692012454 0.8267593865826377 1.0 17.77917685488488 -7.274793515314551 2.3198393193313125 0.9254481438124675 1.1152898954346266 0.19841982635456334 0.16087466845840348 0.5848495313025539 6.004049872177028 0.11749610635019431 0.04938186175118609 5.3113691248788445e-08 7.274793515314551 0.1898417516221591 LAHYNK ddPTM_KYSE-520_SHP099_60min_R1 1 LAHYNK 6 0 P62807;O60814;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;Q5QNW6-2;Q16778;P06899;P33778;P23527;Q6DRA6;Q6DN03;Q99880 P62807;Q16778;Q99880 HIST1H2BC;HIST1H2BK;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;HIST2H2BE;HIST1H2BJ;HIST1H2BB;HIST1H2BO;HIST2H2BD;HIST2H2BC;HIST1H2BL Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type 2-E;Histone H2B type 1-J;Histone H2B type 1-B;Histone H2B type 1-O;Putative histone H2B type 2-D;Putative histone H2B type 2-C;Histone H2B type 1-L 0 96.337 0.032467 2327000000.0 5634200.0 4590100.0 2551300.0 3093000.0 6036900.0 5704400.0 4112400.0 5291500.0 3918700.0 5229100.0 False True 5321659.694500759 4369584.706119434 2715760.8802243327 3386957.7900556386 6511969.684737596 5668796.723660258 4528121.525156293 5273145.021545382 3207162.8623880562 5182774.242178233 1.0267975114934111 0.84309763496142 0.523997525904764 0.6535028600111582 1.2564640828346643 1.0937765101799528 0.8736868158959591 1.017436757833613 0.6188119938328897 1.0 22.30529312168398 -5.723720776691886 24.999991313933595 0.9782722060504419 0.750662952130631 0.2256015940311542 0.19455073199418085 260.75660752763264 172828.99389643045 0.06027836545636709 0.07781727558930591 1.8892055959195922e-06 5.723720776691886 -0.2276092539198109 LAIQGPEDS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 7 LAIQGPEDSPSR 12 0 Q15773 Q15773 MLF2 Myeloid leukemia factor 2 1 LAIQGPEDS(0.5)PS(0.5)R;LAIQGPEDS(1)PSR;LAIQGPEDS(0.966)PS(0.034)R;LAIQGPEDS(0.972)PS(0.028)R;LAIQGPEDS(1)PSR;LAIQGPEDS(1)PSR;LAIQGPEDS(0.834)PS(0.166)R 289.99 1.1986999999999999e-29 10946790000.0 10006340.0 9869370.0 8934050.0 6740690.0 7697520.0 8702600.0 7109860.0 8021890.0 10074630.0 8844050.0 True False 9451268.373055747 9395230.650973609 9509953.157985425 7381323.15093766 8303271.031102294 8648283.845334442 7828594.034346791 7994063.935913207 8245331.152754894 8765698.597566774 1.0782105120154686 1.0718176704799756 1.0849053332298288 0.8420690112464743 0.9472457829438896 0.9866052031192444 0.8930941381580119 0.9119711163845217 0.9406359414460901 1.0 23.063437642976687 -5.240249326118157 24.729135725080237 0.9293241596907835 1.0776618523688535 0.7144012943206242 0.04247289188122479 365.4555902641123 426491.8033272669 0.011317157222851155 0.019577384591947675 5.7510967518473324e-06 5.240249326118157 0.14833769267806995 LAIQGPEDSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 LAIQGPEDSPSR 12 0 Q15773 Q15773 MLF2 Myeloid leukemia factor 2 1 LAIQGPEDS(0.347)PS(0.653)R 258.79 1.7283e-21 2401500000.0 1386200.0 1288800.0 1146600.0 836570.0 942190.0 1217600.0 919990.0 1024700.0 1221500.0 1081100.0 True False 1309304.7226788078 1226884.1134717609 1220511.6706248652 916077.3612760578 1016334.9926722208 1210000.5067542135 1012991.5674371504 1021145.554866777 999706.3915091775 1071522.2950830713 1.2219108540128902 1.1449916806226088 1.139044587523252 0.8549307517722136 0.9484963563855925 1.1292350260060677 0.9453760991119804 0.9529858217160206 0.9329776861354749 1.0 20.031230437697154 -5.1112484222685355 6.12485704799675 0.9698597449560877 1.1736810431745615 0.6562951538994023 0.0674581832058837 0.14918974403640112 7.086260896907865 0.019248819364699504 0.03391666207124526 7.740189219444047e-06 5.1112484222685355 0.20382129821847372 LAIRES(ph)IESEIRR ddPTM_KYSE-520_SHP099_60min_R1 4 LAIRESIESEIRR 13 2 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 1 LAIRES(1)IESEIRR;LAIRES(0.851)IES(0.149)EIRR;LAIRES(0.982)IES(0.018)EIRR;LAIRES(0.916)IES(0.084)EIRR 104.44 0.00052217 2904680000.0 1330019.0 1444553.0 1374106.0 1164636.0 1225878.0 1332101.0 1052947.0 1266074.0 1562509.0 1270015.0 True False 1256240.1947428565 1375154.5055617422 1462683.0714073365 1275322.655279418 1322347.6243082967 1323786.8635412238 1159389.1585324244 1261682.284797894 1278796.7532465095 1258763.6551567197 0.9979952865627114 1.0924644192960367 1.1619997649401692 1.0131549715904664 1.0505130322845717 1.0516564075536552 0.9210538879024729 1.002318647848798 1.0159149003132726 1.0 20.26357599809846 -6.587890218290252 10.25951380213028 0.9850186995700807 1.065918198387481 0.37879088991930143 0.048105699293711654 0.46646287633186384 70.59416523003793 0.01901550107860383 0.014721003951532969 2.5829130213369905e-07 6.587890218290252 0.08089949881740033 LALAGEGEACPLLGS(ph)PGAGR ddPTM_KYSE-520_SHP099_60min_R1 5 LALAGEGEACPLLGSPGAGR 20 0 Q96F46-2;Q96F46 Q96F46-2 IL17RA Interleukin-17 receptor A 1 LALAGEGEACPLLGS(1)PGAGR;LALAGEGEACPLLGS(1)PGAGR;LALAGEGEACPLLGS(1)PGAGR;LALAGEGEACPLLGS(1)PGAGR;LALAGEGEACPLLGS(1)PGAGR 265.64 2.4218000000000004e-35 753358000.0 324203.0 449707.0 325028.0 402800.0 445776.0 557190.0 422206.0 651587.0 839067.0 578586.0 True False 306218.813307342 428102.4006960312 345979.82494318753 441081.990893764 480856.03508151346 553712.3705308634 464886.70281347533 649326.7967785496 686713.5839577822 573460.1781730959 0.533984442098282 0.7465250718190423 0.6033197039860636 0.7691588844040462 0.8385168724590492 0.9655637681675749 0.8106695469151682 1.1322962282178792 1.1974913169132058 1.0 19.129333781520327 -6.170263552272563 0.6109293113749222 1.1141303974876242 0.5935216528855659 0.7733188846165856 0.09698911442924615 0.3968904818288875 0.32509399160192115 0.07729140936942662 0.0943109221373536 6.756728178661838e-07 6.170263552272563 -0.5206087446020583 LALLGLAQPSEKPS(ph)SPSPDLPFTTPAPK ddPTM_KYSE-520_SHP099_60min_R1 2 LALLGLAQPSEKPSSPSPDLPFTTPAPK 28 1 A0A0C4DGU2;Q9Y4U1 A0A0C4DGU2 MMACHC Methylmalonic aciduria and homocystinuria type C protein 1 LALLGLAQPS(0.004)EKPS(0.473)S(0.473)PS(0.019)PDLPFT(0.026)T(0.006)PAPK;LALLGLAQPSEKPS(0.437)S(0.282)PS(0.282)PDLPFTTPAPK 186.33 1.9722999999999997e-15 529286000.0 394040.0 514093.0 408456.0 334257.0 404326.0 593427.0 390796.0 517057.0 644214.0 486245.0 True False 372181.8157007346 489395.2006106747 434785.7273127075 366024.68478196865 436144.1558997527 589723.2019724306 430301.4734814173 515263.44994901115 527240.976913379 481937.2475928852 0.7722619854756151 1.0154749462819888 0.9021625315003484 0.7594861916362329 0.9049812150402284 1.2236514295541587 0.8928578889277156 1.069150501486613 1.0940033781301834 1.0 18.878485781721185 -6.025858606699777 24.383340414236788 1.0516461766629612 0.8706413559382488 0.45567679483959544 0.1017701888061079 525.0769509130381 495119.71588853875 0.032816480857103515 0.032947503442276 9.421962975416349e-07 6.025858606699777 -0.18100482072471247 LALLGLAQPSEKPSS(ph)PSPDLPFTTPAPK ddPTM_KYSE-520_SHP099_60min_R1 2 LALLGLAQPSEKPSSPSPDLPFTTPAPK 28 1 A0A0C4DGU2;Q9Y4U1 A0A0C4DGU2 MMACHC Methylmalonic aciduria and homocystinuria type C protein 1 LALLGLAQPS(0.001)EKPS(0.041)S(0.952)PS(0.003)PDLPFT(0.002)T(0.001)PAPK;LALLGLAQPSEKPS(0.017)S(0.982)PS(0.001)PDLPFTTPAPK 199.64 7.4568e-16 328064000.0 246621.0 330312.0 251686.0 216843.0 235128.0 335057.0 255154.0 321985.0 374688.0 306717.0 True False 232940.44150322524 314443.31571157975 267910.0822718383 237451.69352377474 253631.2359046837 332965.7849799163 280947.4563830677 320868.1091868637 306654.1043158336 303999.72600221535 0.7662521429428122 1.0343539444811483 0.8812839596766149 0.7810918011223613 0.834314027976576 1.0952831746219727 0.924170097380352 1.0554881525930238 1.0087315154803755 1.0 18.21371049779178 -6.249466038621984 24.967908619620534 1.0144173181901062 0.866034291471843 0.49296941444071474 0.07959446872182008 697.9779862315897 1455488.2284167449 0.026593040667684618 0.026384128883800827 5.630331442806734e-07 6.249466038621984 -0.1483830267182632 LALPGFS(ph)TPR ddPTM_KYSE-520_SHP099_60min_R1 1 LALPGFSTPR 10 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBM4 H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 LALPGFS(0.664)T(0.336)PR 55.353 0.057263999999999995 418800000.0 585870.0 552240.0 494220.0 396260.0 400040.0 553210.0 413120.0 494730.0 576420.0 558850.0 True False 553370.6231971094 525709.5614708603 526078.2119799588 433920.4312600863 431520.8720837568 549757.2111871701 454882.20126266096 493013.8971008505 471756.6583657148 553899.0237787204 0.9990460344594829 0.9491072179265626 0.9497727733676673 0.7833926629800942 0.7790605391212009 0.9925224410700444 0.8212366906867558 0.8900790142894471 0.8517015522926412 1.0 19.079263470257345 -5.049220464776995 13.249237101726264 0.8680672378683172 0.9679289815868484 0.2544802932065042 0.07228784215132249 2.779731941020436 747.6633106776202 0.019231683178622814 0.03336780019459033 8.928521221938094e-06 5.049220464776995 0.09986174371853118 LALQLHPDR ddPTM_KYSE-520_SHP099_60min_R1 1 LALQLHPDR 9 0 Q9UBS4 Q9UBS4 DNAJB11 DnaJ homolog subfamily B member 11 0 94.69200000000001 0.0024890999999999997 0.0 56177.0 44342.0 35217.0 39794.0 57004.0 55026.0 37309.0 46258.0 44947.0 50097.0 False True 53060.749823926904 42211.74376130105 37487.14416919228 43576.00979549764 61489.890491607 54682.562323141676 41080.55782075091 46097.54179469838 36785.75782166433 49653.179554876246 1.068627433320451 0.8501317365718546 0.7549797315147125 0.8776076413664069 1.2383877738111198 1.1012902459289038 0.8273499942808104 0.928390532246818 0.7408540228729772 1.0 15.599598483630995 -11.377395086180103 2.348796086548781 1.511727615554285 0.9335586803123594 0.01771838084325328 0.15156560294686713 24006061.138819106 5050506.25612301 64723747.36101843 0.040448547846763966 4.1937729467894405e-12 11.377395086180103 -0.5781689352419255 LALS(ph)PEDKPIR ddPTM_KYSE-520_SHP099_60min_R1 2 LALSPEDKPIR 11 1 H9KVB4;O15417;O15417-2;O15417-3 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 LALS(1)PEDKPIR;LALS(1)PEDKPIR 164.68 1.1526e-05 390260000.0 480790.0 427770.0 391952.0 388630.0 434820.0 431740.0 369189.0 412740.0 506430.0 410740.0 True False 454119.6202688964 407219.2871041399 417217.853065373 425565.2783541294 469037.8602126267 429045.3505141787 406510.2270574183 411308.30127423984 414475.0780613935 407101.16315088415 1.1154957572562518 1.0002901587220767 1.0248505551695988 1.0453551030420463 1.152140801029318 1.0539035241104466 0.9985484293660767 1.010334380012067 1.0181132248639053 1.0 18.635027817923124 -6.694547368778966 5.857178642795339 1.0076913369329945 1.0641310296405408 0.33218890785329325 0.04081457496116291 0.2768562618153712 17.467824703969622 0.01692069630220254 0.012888068658631242 2.0204710458948447e-07 6.694547368778966 0.05643969270754634 LALS(ph)PLSLGK ddPTM_KYSE-520_SHP099_60min_R1 4 LALSPLSLGK 10 0 P49454 P49454 CENPF Centromere protein F 1 LALS(0.999)PLS(0.001)LGK;LALS(0.994)PLS(0.006)LGK;LALS(0.9)PLS(0.1)LGK;LALS(1)PLSLGK 197.07 1.9792e-06 5556350000.0 9228010.0 10202350.0 7569130.0 6049710.0 6431910.0 9217880.0 6831730.0 7911240.0 9338220.0 8713420.0 True False 8716113.889718128 9712213.791960448 8057048.230836201 6624672.619488369 6938064.724438147 9160347.79172102 7522347.939659562 7883797.754937288 7642634.645369484 8636225.877738176 1.009250338412973 1.1245900616142839 0.9329362553618548 0.7670795916263561 0.8033676773464873 1.060688768612906 0.8710226024831187 0.9128753539505675 0.884950758996485 1.0 23.04196954640751 -4.88749624087266 5.84408836363851 0.8944939422093137 1.0648323994078701 0.37625192519373174 0.08435035317874455 0.20007540215942082 9.408725440367219 0.02259590914525089 0.04836249813641665 1.295697912654607e-05 4.88749624087266 0.17033845719855645 LALSPEDKPIRLS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 2 LALSPEDKPIRLSPSK 16 2 H9KVB4;O15417;O15417-2;O15417-3 H9KVB4 TNRC18 Trinucleotide repeat-containing gene 18 protein 1 LALSPEDKPIRLS(0.999)PS(0.001)K;LALSPEDKPIRLS(0.956)PS(0.044)K 149.84 6.0748e-06 2181800000.0 2363300.0 2225900.0 1799780.0 1698650.0 1798790.0 1895520.0 1724130.0 1931960.0 2253800.0 2135600.0 True False 2232203.0378782493 2118964.4228559835 1915796.6985498145 1860089.1852822558 1940344.5392849233 1883689.3565725572 1898421.8862872566 1925258.481682852 1844566.7336744864 2116680.2454716596 1.0545773470762694 1.001079131998898 0.9050949961140294 0.8787766547458717 0.9166923267867304 0.889926270442806 0.8968864760507232 0.9095651012011249 0.871443260086486 1.0 21.0133719156115 -4.633143325061801 2.9571507536358683 0.9028834232133548 1.0482677710440396 0.6720897233146947 0.03406286363497377 0.13021043531699944 2.1703741724496184 0.008269008172257938 0.029880063653512975 2.3273230720579322e-05 4.633143325061801 0.14538434783068477 LAMQEFMILPVGAANFR ddPTM_KYSE-520_SHP099_60min_R1 1 LAMQEFMILPVGAANFR 17 0 P06733;A0A2R8Y6G6;P06733-2;K7EM90 P06733 ENO1 Alpha-enolase;Enolase 0 121.04 0.00028439 6240400.0 10622.0 10702.0 14373.0 13487.0 14269.0 14745.0 11020.0 9221.6 13579.0 8924.3 False True 10032.776485567965 10187.859855970506 15299.506577613105 14768.800424985586 15391.889120495762 14652.970985619955 12134.009144835702 9189.612421937616 11113.395898733621 8845.237645000334 1.134257426225159 1.1517904057364783 1.729688584032671 1.6696895004662171 1.7401329097354263 1.6565943814864459 1.371812678395849 1.038933354959879 1.2564270565432842 1.0 13.110685188986274 -7.0748961581933205 4.144185571064233 1.114962834226446 1.524584154585389 0.42659105268819153 0.21426994508482297 0.25333486927237614 8.175112307549044 0.11793871683820221 0.0669803338542124 8.415963471443112e-08 7.0748961581933205 0.40962132035894316 LANDFPLDLS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 8 LANDFPLDLSPVK 13 0 Q96JM2;Q96JM2-3 Q96JM2 ZNF462 Zinc finger protein 462 1 LANDFPLDLS(1)PVK;LANDFPLDLS(1)PVK;LANDFPLDLS(1)PVK;LANDFPLDLS(1)PVK;LANDFPLDLS(1)PVK;LANDFPLDLS(1)PVK;LANDFPLDLS(1)PVK;LANDFPLDLS(1)PVK 321.82 3.918999999999999e-40 1730077000.0 3022640.0 3068440.0 2349500.0 2057030.0 2230990.0 3066910.0 2289830.0 3053590.0 3292070.0 2953750.0 True False 2854968.133716544 2921027.5365776597 2500952.5293329135 2252529.51273138 2406556.220403311 3047768.277077501 2521308.3629872175 3042997.809003262 2694313.074331246 2927582.0729827234 0.9751966170525844 0.9977611092561495 0.8542723882664219 0.7694163499356395 0.8220286094153552 1.0410530605457382 0.861225509697981 1.0394235697388832 0.9203202530838649 1.0 21.481278185695558 -6.25610255593 24.994807150628017 0.9679197657878855 0.8820819506913491 0.233173256569294 0.08016552928929765 775.6810669906079 3632875.5387464515 0.028826055312310694 0.028031526536472194 5.544947570219133e-07 6.25610255593 -0.08583781509653643 LANDFPLDLS(ph)PVKK ddPTM_KYSE-520_SHP099_60min_R1 5 LANDFPLDLSPVKK 14 1 Q96JM2;Q96JM2-3 Q96JM2 ZNF462 Zinc finger protein 462 1 LANDFPLDLS(1)PVKK;LANDFPLDLS(1)PVKK;LANDFPLDLS(1)PVKK;LANDFPLDLS(1)PVKK;LANDFPLDLS(1)PVKK 107.72 0.00025927 3060881000.0 2129560.0 1947670.0 1726010.0 1485810.0 1597760.0 1978680.0 1619360.0 1938700.0 2116190.0 1928210.0 True False 2011429.061627388 1854101.0096877287 1837271.366313643 1627020.9356749335 1723494.6219891608 1966330.324165919 1783060.7122305946 1931975.1021959824 1731943.2408086825 1911127.5595246812 1.052482892417528 0.9701607830661311 0.9613546501158683 0.8513408367569101 0.9018208195468717 1.0288849189401923 0.9329888543253815 1.0109085040228745 0.9062415704158628 1.0 20.86599264452701 -9.030898704681023 16.73944973905378 0.999999998476922 0.9560591427812583 0.044578018661478036 0.058956112746722855 0.0 0.0 0.0583452583418878 0.014150803699856081 9.31325073413735e-10 9.030898704681023 -0.04394085569566375 LAPGGHVGR ddPTM_KYSE-520_SHP099_60min_R1 4 LAPGGHVGR 9 0 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 ;;; 147.34 0.00053526 2719670000.0 3013840.0 2844600.0 2054170.0 1867057.0 2554820.0 2792370.0 2069800.0 2477270.0 2369130.0 2299690.0 False True 2846656.2872589095 2707941.1461683516 2186585.084988206 2044501.5359288442 2755869.7990626507 2774941.783052941 2279035.583301355 2468676.928569165 1938955.7129071958 2279316.535731749 1.2489078382195926 1.1880496208917282 0.95931611547153 0.8969800832302915 1.2090772632322915 1.217444676749154 0.9998767383002801 1.0830777076675855 0.8506741746971601 1.0 21.120169859359496 -4.617986063157969 5.632011489525892 1.0381687534187547 1.234289314231229 0.3156464407371823 0.11315224712344812 0.24614214404963095 11.507562469356474 0.030657213404152835 0.08469212455296272 2.4099827656355612e-05 4.617986063157969 0.1961205608124743 LAPS(ph)EDELTCFSK ddPTM_KYSE-520_SHP099_60min_R1 7 LAPSEDELTCFSK 13 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 LAPS(0.989)EDELT(0.01)CFSK;LAPS(1)EDELTCFSK;LAPS(1)EDELTCFSK;LAPS(1)EDELTCFSK;LAPS(1)EDELTCFSK;LAPS(1)EDELTCFSK;LAPS(1)EDELTCFSK 265.12 3.6091e-22 5100160000.0 4615100.0 4391530.0 3618320.0 3206690.0 3450270.0 4067410.0 3290190.0 3976360.0 4837180.0 4000580.0 True False 4359091.203026243 4180554.3069790797 3851562.6967166974 3511452.8534734943 3721786.61964909 4042023.785460869 3622794.514359982 3962566.9352494017 3958870.047384657 3965137.973604144 1.0993542298009902 1.0543275756881496 0.9713565385004216 0.8855815048175312 0.9386272670522338 1.0193904505640288 0.9136616527537915 0.9993515891825562 0.9984192413325306 1.0 21.9189396371125 -4.671475993149508 3.2412965667355786 0.9614295706945578 1.0908975957705491 0.5568868754735394 0.040434187169126494 0.17545716755546345 3.539736828571043 0.01103684382489263 0.03552521472050031 2.1307083451914617e-05 4.671475993149508 0.1294680250759913 LAPVPS(ph)PEPQKPAPVS(ph)PESVK ddPTM_KYSE-520_SHP099_60min_R1 11 LAPVPSPEPQKPAPVSPESVK 21 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 LAPVPS(1)PEPQKPAPVS(0.899)PES(0.101)VK;LAPVPS(1)PEPQKPAPVS(0.942)PES(0.058)VK;LAPVPS(1)PEPQKPAPVS(0.99)PES(0.01)VK;LAPVPS(1)PEPQKPAPVS(1)PESVK;LAPVPS(1)PEPQKPAPVS(0.998)PES(0.002)VK;LAPVPS(1)PEPQKPAPVS(0.992)PES(0.008)VK;LAPVPS(1)PEPQKPAPVS(0.984)PES(0.016)VK;LAPVPS(1)PEPQKPAPVS(0.997)PES(0.003)VK;LAPVPS(1)PEPQKPAPVS(0.999)PES(0.001)VK;LAPVPS(1)PEPQKPAPVS(0.926)PES(0.074)VK;LAPVPS(1)PEPQKPAPVS(0.711)PES(0.289)VK 175.07 1.3396e-09 102025500000.0 40271560.0 34469620.0 33334270.0 33207780.0 35902570.0 34196020.0 33138790.0 35649900.0 41397670.0 34414590.0 True False 38037616.28743543 32813647.71524559 35483050.3809178 36363837.42691686 38727898.00132022 33982589.954810426 36488782.29662339 35526238.81764922 33880896.67833625 34109703.50674587 1.1151552894592807 0.962003311132741 1.0402626447310024 1.066084828902872 1.135392396291601 0.9962733903004961 1.0697478589752916 1.0415288075026277 0.9932920311557569 1.0 25.023678878816725 -7.69718951458133 4.476210202833037 0.9961222491547328 1.0522714019027748 0.1858837596835492 0.04779035224134418 0.3577152382602037 13.571295651073026 0.03717330476400809 0.012210747483973453 2.0082162891066702e-08 7.69718951458133 0.056149152748042 LAPVPS(ph)PEPQKPAPVSPESVK ddPTM_KYSE-520_SHP099_60min_R1 2 LAPVPSPEPQKPAPVSPESVK 21 1 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 LAPVPS(1)PEPQKPAPVSPESVK;LAPVPS(1)PEPQKPAPVSPESVK 203.33 5.7599e-14 4133200000.0 3664200.0 4638000.0 3269300.0 2698200.0 2878300.0 4713600.0 2986700.0 4211200.0 4605700.0 4530600.0 True False 3460939.5215983912 4415183.518220067 3480044.309064954 2954636.1167565896 3104805.8347132234 4684180.673978863 3288624.783383015 4196592.330101465 3769420.9802487264 4490462.408753466 0.7707312090736629 0.9832358265851076 0.7749857347165724 0.6579803699051084 0.6914222973253004 1.0431399369578895 0.7323577137562374 0.9345568335948773 0.8394282452739878 1.0 22.09843258455028 -6.241456022755975 24.999565420617767 0.8947101960299857 0.7806260226653583 0.2543538820679957 0.11326925590996566 1461.4836866707626 1828345.4994118535 0.038581434352684164 0.03853255665598221 5.735139383993495e-07 6.241456022755975 -0.1140841733646274 LAPWQAS(ph)PPHPCR ddPTM_KYSE-520_SHP099_60min_R1 2 LAPWQASPPHPCR 13 0 Q8IY92-2;Q8IY92 Q8IY92-2 SLX4 Structure-specific endonuclease subunit SLX4 1 LAPWQAS(1)PPHPCR;LAPWQAS(1)PPHPCR 159.4 7.7217e-07 1010990000.0 547870.0 543150.0 553280.0 442060.0 442770.0 419340.0 455840.0 527210.0 626900.0 557760.0 True False 517478.55894823186 517056.25871522917 588945.3140792997 484073.2494898152 477613.4799833144 416722.7435137248 501920.7557696828 525381.2315617396 513070.76286295813 552818.6803307142 0.9360728523838219 0.9353089486880386 1.0653498787829914 0.8756456080685022 0.863960457518531 0.7538145115943399 0.90793016522057 0.9503680867792661 0.9280995398998139 1.0 19.076446841185312 -5.313747995064969 24.999962940200376 0.8881469836964259 0.9745506938164111 0.2171221026532928 0.06958562586868101 483.6235370565811 231138.0512892903 0.02051071705426051 0.030422339429469127 4.855701767446334e-06 5.313747995064969 0.08640371011998527 LAQANGWGVMVSHR ddPTM_KYSE-520_SHP099_60min_R1 2 LAQANGWGVMVSHR 14 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 162.48 1.5409e-05 296860000.0 370880.0 407110.0 319690.0 336470.0 502450.0 471900.0 371040.0 322040.0 314960.0 256960.0 False True 350306.54706905 387551.8245154323 340297.72892208514 368448.0076366054 541989.9564505639 468954.6970575833 408548.3442014374 320922.9184047013 257771.20349548114 254683.53431185504 1.3754581662122942 1.5216995694777922 1.336159127214707 1.4466895499630061 2.1280918608067836 1.8413231869295381 1.60414117585308 1.260085067029647 1.0121235524391825 1.0 17.95834616457694 -7.463168550751027 2.6297717877890854 1.009492425307595 1.6175648080017369 0.5517645753512722 0.22109922684876668 0.25026488497795457 3.2715772621903434 0.190772893803459 0.06890021434108883 3.442163136429219e-08 7.463168550751027 0.6080723826941419 LAQFVEHWK ddPTM_KYSE-520_SHP099_60min_R1 4 LAQFVEHWK 9 0 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ;;; 139.43 0.00072752 769608000.0 1354940.0 1293620.0 927459.0 788745.0 1489730.0 1342320.0 955453.0 1029576.0 1031233.0 964062.0 False True 1279778.777194073 1231472.5534367925 987244.491126869 863707.0876551691 1606963.275595776 1333942.0829716783 1052039.5135626772 1026004.641160844 843987.0824684278 955521.1607088872 1.3393515809159307 1.2887967363518993 1.0332000291803551 0.9039120462956545 1.6817662880470314 1.3960361505568817 1.1010112144268835 1.0737644369902455 0.8832740887101718 1.0 19.865928297521002 -7.167605191025018 2.443128383673748 0.9678238160121968 1.2626388563226363 0.29234534037004 0.20091637052082 0.4459459144612063 5.12438152578786 0.1327004496248417 0.06316492815261822 6.79821364653341e-08 7.167605191025018 0.2948150403104395 LARS(ph)S(ph)PEQPRPSTSK ddPTM_KYSE-520_SHP099_60min_R1 1 LARSSPEQPRPSTSK 15 2 P29590-12;P29590-13;P29590-11;H3BT57;H3BUJ5;H3BRN3;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4;H3BVD2 P29590-12;P29590-2 PML Protein PML 2 LARS(0.982)S(0.785)PEQPRPS(0.096)T(0.111)S(0.026)K 69.361 0.017566 389640000.0 322110.0 280890.0 299620.0 277130.0 307350.0 277970.0 287940.0 293160.0 372370.0 311250.0 True False 304241.91618963407 267395.6227755143 318933.9846089498 303468.35187782726 331536.69641771517 276235.0861222638 317047.78522359295 292143.0963840583 304756.99468380865 308492.56714883615 0.9862212208271738 0.8667814114513362 1.033846577104323 0.9837136585900791 1.0746991393726548 0.8954351434632482 1.0277323312967512 0.947002059349813 0.9878908834026292 1.0 18.234876203789796 -4.771219065880163 24.999992634596026 0.9921264854689804 0.9265013022154244 0.2022028276761556 0.05338133799959847 271.4164794097464 693832.0253950434 0.013177223576857945 0.027980767669696135 1.6934833617658298e-05 4.771219065880163 -0.06562518325355604 LAS(ph)GEDDPFDSDFSCPVK ddPTM_KYSE-520_SHP099_60min_R1 2 LASGEDDPFDSDFSCPVK 18 0 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 LAS(1)GEDDPFDSDFSCPVK;LAS(1)GEDDPFDSDFSCPVK 199.15 8.500799999999999e-13 138645000.0 394850.0 374090.0 309550.0 279400.0 294520.0 350320.0 283840.0 289840.0 373120.0 350220.0 True False 372946.8833860395 356118.1548794618 329504.08829751145 305954.09199532674 317697.0484104289 348133.52293539443 312533.3172114486 288834.6126891645 305370.8135897701 347117.32326703717 1.074411613560213 1.0259302287990402 0.9492585538406683 0.8814140680612371 0.915244002864198 1.0029275394808674 0.9003679628256896 0.8320950679461313 0.8797337186045553 1.0 18.405063840663022 -4.726793864214887 2.2561322125384247 0.9117186108010324 1.0704514434549461 0.5373552082219921 0.04980230455385943 0.25214651416670597 2.4469951186631027 0.01447939423900559 0.05436082248929147 1.875884676424676e-05 4.726793864214887 0.1587328326539137 LAS(ph)IDEK ddPTM_KYSE-520_SHP099_60min_R1 2 LASIDEK 7 0 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 LAS(1)IDEK;LAS(1)IDEK 121.73 0.0024538 628310000.0 2003650.0 1855880.0 1768490.0 1786600.0 2019380.0 1968090.0 1927710.0 2006930.0 2246200.0 2123310.0 True False 1892503.540322752 1766720.7390673256 1882489.6950840468 1956397.926839121 2178293.71729951 1955806.4202840817 2122581.7394365906 1999968.4282509852 1838346.7020940762 2104499.1253101835 0.8992655390359522 0.8394970175180888 0.894507235685634 0.9296263910543399 1.0350651568830895 0.9293453234369077 1.008592360010481 0.9503298928462175 0.8735317016694512 1.0 21.00504547937809 -5.302317697504527 2.9814535995913403 0.964705634541088 0.8707868579402166 0.4316458456507123 0.045080000175678106 0.2403093894730448 4.2738013358296305 0.01306460416778637 0.02211128796941601 4.985196741683083e-06 5.302317697504527 -0.09391877660087145 LAS(ph)LEELKR ddPTM_KYSE-520_SHP099_60min_R1 1 LASLEELKR 9 1 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 LAS(1)LEELKR 107.85 0.00062458 0.0 187930.0 132560.0 133730.0 125290.0 143310.0 137720.0 113540.0 128670.0 187480.0 102230.0 True False 177505.14827083272 126191.61862338358 142350.44977556533 137197.5239301879 154587.68167764012 136860.43839535973 125017.73124361584 128223.67380180368 153438.35798619775 101324.32173373653 1.751851334739617 1.2454227816594141 1.4048991134590432 1.3540433489475525 1.525672010752471 1.3507165511061223 1.2338373364308486 1.2654777412549987 1.5143289919019467 1.0 16.628620992435433 -13.2672472644608 0.13441271083352113 3.525076545155482e-17 1.545501499999821 0.42788911082470893 0.14633858671270267 115.47144208544137 1.164409806307846 32.758777403558675 1.0325836161959296 5.404465334724282e-14 13.2672472644608 1.545501499999821 LAS(ph)LKR ddPTM_KYSE-520_SHP099_60min_R1 1 LASLKR 6 1 Q9H7L9 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 1 LAS(1)LKR 44.395 0.06827799999999999 0.0 328790.0 296050.0 309470.0 264290.0 272790.0 236980.0 255760.0 281710.0 310760.0 328000.0 True False 310551.3632733845 281827.31361989066 329418.93136950734 289408.0421383142 294257.02103721595 235500.91991673247 281614.71677705797 280732.813761608 254333.81762209733 325094.1751801386 0.9552658490460626 0.8669097607292617 1.0133030872883906 0.8902283222329337 0.9051439352125106 0.7244083034900227 0.866255806093763 0.863543044430281 0.7823388945100843 1.0 18.310498181452434 -6.019422547934509 24.08514663295213 0.837166063620365 0.9282941675117586 0.2144511313088595 0.07546404576528504 656.9863778465518 814702.6423495432 0.023385002013805598 0.023751443240204735 9.56263219768957e-07 6.019422547934509 0.09112810389139359 LAS(ph)PELER ddPTM_KYSE-520_SHP099_60min_R1 6 LASPELER 8 0 P05412;P17535 P05412;P17535 JUN;JUND Transcription factor AP-1;Transcription factor jun-D 1 LAS(1)PELER;LAS(1)PELER;LAS(1)PELER;LAS(1)PELER;LAS(1)PELER;LAS(1)PELER 180.74 3.1235e-05 16783100000.0 13593850.0 12973560.0 12415890.0 10949870.0 12071710.0 13507280.0 13775470.0 14964000.0 16516900.0 15287700.0 True False 12839772.041831853 12350290.703889422 13216238.135526402 11990542.352601526 13021684.89836568 13422976.055248888 15168028.94323138 14912093.376623841 13517847.31716574 15152262.871650636 0.8473831368022677 0.8150789626938424 0.8722286728706067 0.7913367431761905 0.8593887928600292 0.8858727022458682 1.0010405093756816 0.9841495955382252 0.8921338965453911 1.0 23.853029929191788 -6.52136735451596 2.8975871230346124 0.9676629571886187 0.8355589899205266 0.7467230499761457 0.036114771817432036 0.13198926596390761 2.2553700171589237 0.014376338950634795 0.011386218186044126 3.010458505328624e-07 6.52136735451596 -0.13210396726809215 LAS(ph)PMKPVPGT(ph)PPSSK ddPTM_KYSE-520_SHP099_60min_R1 7 LASPMKPVPGTPPSSK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 2 LAS(1)PMKPVPGT(0.921)PPS(0.042)S(0.037)K;LAS(1)PMKPVPGT(0.602)PPS(0.177)S(0.221)K;LAS(1)PMKPVPGT(0.895)PPS(0.05)S(0.055)K;LAS(1)PMKPVPGT(0.994)PPS(0.005)S(0.002)K;LAS(1)PMKPVPGT(0.999)PPS(0.001)SK;LAS(1)PMKPVPGT(0.999)PPS(0.001)SK;LAS(1)PMKPVPGT(0.992)PPS(0.006)S(0.001)K 99.441 0.0014024 7164710000.0 12924610.0 11136470.0 10701560.0 10455490.0 11538220.0 10575010.0 10257230.0 10993820.0 12648820.0 11264460.0 True False 12207656.118728722 10601457.265017739 11391399.680701403 11449176.626042293 12446212.270508552 10509007.439989215 11294130.909317885 10955685.004396882 10352113.138804022 11164665.648017278 1.0934188719656524 0.9495543887514841 1.0203081793787878 1.0254831615199818 1.114785938324885 0.9412738160999473 1.011595981947171 0.9812819613046353 0.9272210619798045 1.0 23.4124367111471 -6.30084060590157 24.99976111792001 0.973562278311524 1.0336666144959163 0.33370506716074 0.047818546361762686 736.9634061889159 467595.3757135225 0.016824327313478816 0.014837855346031511 5.002180905715181e-07 6.30084060590157 0.06010433618439237 LAS(ph)PMKPVPGTPPSSK ddPTM_KYSE-520_SHP099_60min_R1 2 LASPMKPVPGTPPSSK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LAS(0.904)PMKPVPGT(0.095)PPSSK;LAS(0.998)PMKPVPGT(0.002)PPSSK 112.32 0.00013959 4707100000.0 3391790.0 3650660.0 2783530.0 2504880.0 2678670.0 3620900.0 3075060.0 3631500.0 3750600.0 4082600.0 True False 3203640.647334264 3475276.813847623 2962960.797605468 2742943.042080369 2889466.0894525456 3598300.6199953416 3385917.0744935074 3618903.174098469 3069585.584931904 4046431.3402147414 0.7917200065883854 0.8588498164565896 0.7322404727737765 0.6778671899903786 0.7140776270527807 0.8892528545422896 0.8367662243130558 0.8943443913486534 0.758590799360753 1.0 21.948218685369678 -6.2672890323297255 24.983244621588852 0.866748342313667 0.755179044705586 0.41022063224007144 0.07203921367249018 549.9331888233255 2348698.555918105 0.025623366056247418 0.023205555532647602 5.403945590277508e-07 6.2672890323297255 -0.1115692976080811 LAS(ph)PSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR ddPTM_KYSE-520_SHP099_60min_R1 4 LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR 38 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LAS(0.4)PS(0.4)GS(0.084)T(0.084)S(0.016)S(0.016)GLEVVAPEGTSAPGGGPGTLDDSATICR;LAS(0.692)PS(0.138)GS(0.138)T(0.025)S(0.003)S(0.003)GLEVVAPEGTSAPGGGPGTLDDSATICR;LAS(0.975)PS(0.019)GS(0.006)T(0.001)SSGLEVVAPEGTSAPGGGPGTLDDSATICR;LAS(0.909)PS(0.029)GS(0.029)T(0.029)S(0.005)S(0.001)GLEVVAPEGTSAPGGGPGTLDDSATICR 243.28 1.8679999999999998e-31 1935930000.0 681726.0 1018400.0 632013.0 566521.0 574557.0 944616.0 654424.0 881986.0 988653.0 904892.0 True False 643909.2997929114 969474.5353504353 672753.5692365539 620362.9855092509 619771.3671178562 938720.3011564864 720579.5644827543 878926.596423079 809138.5371139761 896875.3608753223 0.7179473624567811 1.0809467821752383 0.7501082074324881 0.6916936428087355 0.6910339988746917 1.046656360634464 0.8034333374700932 0.979987448384438 0.9021750093840043 1.0 19.77454798160915 -6.25996104296238 24.999883711945312 0.9362610761092487 0.7954410369103104 0.29878910047441554 0.12173950369061774 209.6770775343382 3545826.817622756 0.042586624425428446 0.04045334224897338 5.495901709258771e-07 6.25996104296238 -0.14082003919893826 LAS(ph)TSDIEEK ddPTM_KYSE-520_SHP099_60min_R1 2 LASTSDIEEK 10 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YHI8;H0YIS4;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.494)T(0.253)S(0.253)DIEEK;LAS(0.99)T(0.01)SDIEEK 172.92 0.00013838 0.0 639040.0 614720.0 569540.0 675070.0 915870.0 1380580.0 1709560.0 2677700.0 2525400.0 2240020.0 True False 603591.177305343 585187.9284864683 606253.4596962205 739228.4498328043 987943.758412535 1371963.2881198523 1882379.0084977597 2668411.6836798773 2066851.020153317 2220175.1655091904 0.27186646652130764 0.26357736883893895 0.27306559820795856 0.332959516580875 0.44498460020651254 0.6179527225750211 0.8478515739392309 1.2018924115241534 0.9309405186861871 1.0 21.082242074927535 -6.55866379757334 1.2500749130674127 1.0631268416834863 0.27925363606149695 0.9482759989472349 0.07588097407733937 0.08791763426443527 0.280281381178568 0.04269043363961226 0.02955071911894684 2.762715742718748e-07 6.55866379757334 -0.7838732056219893 down LAS(ph)YLDR ddPTM_KYSE-520_SHP099_60min_R1 1 LASYLDR 7 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 LAS(1)YLDR 71.61399999999999 0.051075999999999996 0.0 79722.0 77517.0 80816.0 84997.0 86552.0 79472.0 73787.0 90466.0 82315.0 87971.0 True False 75299.66173813303 73792.96696461091 86025.52867017187 93075.08932472007 93363.14998648454 78975.98576935836 81246.1100517235 90152.19456092306 67368.67099228656 87191.6453804024 0.8636109733864218 0.8463307079785531 0.9866258205686684 1.067477152411211 1.0707809169004312 0.9057746923435094 0.931810722200051 1.0339545052465093 0.772650529742482 1.0 16.411902283522924 -4.760754427788542 24.998624872501697 0.9756079003053404 0.8549708013395292 0.23501991525981203 0.08351911811390274 24.277497063349784 885878.1788380304 0.021850539483840983 0.05123858141207413 1.7347846560391824e-05 4.760754427788542 -0.12063709896581121 LASDDRPS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 11 LASDDRPSPPR 11 1 P98175-2;P98175;P98175-5;P98175-4;P98175-3 P98175-2 RBM10 RNA-binding protein 10 1 LASDDRPS(1)PPR;LAS(0.013)DDRPS(0.987)PPR;LASDDRPS(1)PPR;LAS(0.049)DDRPS(0.951)PPR;LAS(0.053)DDRPS(0.947)PPR;LASDDRPS(1)PPR;LASDDRPS(1)PPR;LASDDRPS(1)PPR;LASDDRPS(1)PPR;LASDDRPS(1)PPR;LAS(0.056)DDRPS(0.944)PPR 152.55 7.3315e-05 31729610000.0 24669300.0 22332820.0 20559490.0 18452160.0 20888550.0 22273610.0 19898830.0 21297200.0 25010090.0 21976650.0 True False 23300844.75196964 21259917.804953773 21884787.62174709 20205847.738555823 22532360.045408368 22134592.138013896 21910397.930265993 21223324.984003853 20468888.109062426 21781953.978574988 1.0697316124572043 0.9760335471218654 1.0047210476742927 0.9276416504428646 1.034450814999035 1.0161894639840745 1.0058968057602795 0.9743535866837011 0.9397177190437501 1.0 24.37663004291078 -7.343344850945658 4.737498559534128 0.9663815446980046 1.0024091775162316 0.1415174991603798 0.037301317219616666 0.44609314397471156 17.80549085928223 0.021254312783007996 0.009803837954553194 4.535813079940183e-08 7.343344850945658 0.03602763281822696 LASDS(ph)DAESDSR ddPTM_KYSE-520_SHP099_60min_R1 1 LASDSDAESDSR 12 0 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 LAS(0.007)DS(0.993)DAESDSR 184.96 3.2719e-05 0.0 553550.0 468310.0 454890.0 437650.0 499160.0 416480.0 464010.0 467970.0 533950.0 475140.0 True False 522843.4780254332 445811.6846523587 484212.9372497337 479244.12441572937 538441.0521681037 413880.59383458854 510916.6591011992 466346.7212950195 436998.1397841381 470930.6292533262 1.1102345983620057 0.9466610514572087 1.0282043833450947 1.0176533328817121 1.1433553451849527 0.8788568169600858 1.0849085350665595 0.9902662777199804 0.9279458855267303 1.0 18.845155032782124 -7.51861630415475 24.289776617284595 0.9623506309052314 1.0256974274725892 0.11592245299745074 0.07414643722903114 279.9478162287267 1595377.7472359526 0.04491724553765839 0.017922304062152252 3.02958886459904e-08 7.51861630415475 0.06334679656735775 LASGEDDPFDS(ph)DFSCPVK ddPTM_KYSE-520_SHP099_60min_R1 1 LASGEDDPFDSDFSCPVK 18 0 Q99567;J3KMX1 Q99567 NUP88 Nuclear pore complex protein Nup88 1 LASGEDDPFDS(0.994)DFS(0.006)CPVK 73.498 0.022987999999999998 0.0 73399.0 89877.0 59891.0 83039.0 75051.0 71701.0 82754.0 77509.0 79362.0 71507.0 True False 69327.411152721 85559.17401187257 63751.66968898811 90931.00159341421 80957.08671822326 71253.48746286456 91119.58192121005 77240.13936973657 64951.861353214284 70873.5036116041 0.9781851837415025 1.2072096009356026 0.8995134491777836 1.2830041829415937 1.142275781396084 1.005361437376411 1.2856649844849926 1.08983097255954 0.9164477279006669 1.0 16.11295874957034 -7.673111538225105 5.996140520886395 0.9599326299673387 1.1178883183383865 0.20347446109033673 0.12149647448535814 0.29303288995507987 15.46111206646176 0.0820552199143376 0.029569324174719455 2.12269922709613e-08 7.673111538225105 0.1579556883710478 LASLGDTAS(ph)PLVK ddPTM_KYSE-520_SHP099_60min_R1 4 LASLGDTASPLVK 13 0 Q6P4F7-3;Q6P4F7 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 LASLGDT(0.018)AS(0.982)PLVK;LASLGDT(0.059)AS(0.941)PLVK;LASLGDT(0.012)AS(0.988)PLVK;LASLGDT(0.003)AS(0.997)PLVK 218.28 2.4363e-11 693150000.0 1128338.0 1300050.0 1047440.0 812965.0 916177.0 1175260.0 789550.0 1063486.0 1259700.0 1218800.0 True False 1065746.8418539609 1237593.646585166 1114959.658363255 890228.9491731599 988274.9175659443 1167924.7663994383 869365.4192654284 1059797.0152854982 1030970.2344528117 1208002.3802120502 0.882239024783115 1.0244960331683464 0.9229780310263439 0.7369430422950748 0.818106763492026 0.9668232327443124 0.7196719422960258 0.8773136813682965 0.8534504992215639 1.0 20.204191866633472 -5.014189748090518 24.26809184428593 0.8445678467808392 0.9584599216460704 0.17899482369352182 0.08849259427710238 602.7478395027248 1030860.1729870166 0.022665579292829658 0.04140964898675797 9.678548972985608e-06 5.014189748090518 0.11389207486523123 LASPS(ph)GSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR ddPTM_KYSE-520_SHP099_60min_R1 1 LASPSGSTSSGLEVVAPEGTSAPGGGPGTLDDSATICR 38 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LAS(0.073)PS(0.26)GS(0.26)T(0.26)S(0.073)S(0.073)GLEVVAPEGTSAPGGGPGTLDDSATICR 75.727 0.00060668 84343000.0 32578.0 37940.0 30205.0 25906.0 32470.0 42968.0 31239.0 32327.0 41506.0 38664.0 True False 30770.833397367078 36117.30545089898 32152.062629708736 28368.098451077105 35025.20427097185 42699.82077382968 34396.94298325974 32214.86518217852 33969.556681113325 38321.46704013681 0.8029659554823041 0.9424823275442651 0.8390091797903662 0.7402665044468462 0.9139839097049038 1.1142532912194385 0.8975894098008659 0.8406480145563735 0.8864367495517481 1.0 15.225865171599988 -5.983412730573421 24.703311598064452 0.9435142861694702 0.8381195815921004 0.30157649404172704 0.08366255390982048 314.08996677031206 467769.2646457667 0.027784432172548622 0.03149603416876107 1.0389323500012142e-06 5.983412730573421 -0.10539470457736977 LASS(ph)LGNLNAATDDPENKK ddPTM_KYSE-520_SHP099_60min_R1 3 LASSLGNLNAATDDPENKK 19 1 A0A2R8Y6L0;A0A0U1RQX7;A0A2R8YDJ8;Q9UNH5;Q9UNH5-5;Q9UNH5-2 A0A2R8Y6L0 CDC14A Dual specificity protein phosphatase CDC14A 1 LAS(0.161)S(0.838)LGNLNAATDDPENKK;LAS(0.141)S(0.859)LGNLNAATDDPENKK;LAS(0.051)S(0.949)LGNLNAATDDPENKK 163.74 7.483600000000001e-09 295460000.0 320260.0 371920.0 318816.0 326096.0 327928.0 305263.0 268274.0 336324.0 384454.0 350391.0 True False 302494.53937751794 354052.40493669885 339367.38948363584 357088.0657956627 353734.06794491084 303357.7403854393 295393.75402192853 335157.3705426114 314646.84489665885 347286.8083400733 0.8710222562824976 1.0194812945212721 0.9771963153616751 1.0282223718846002 1.01856465448732 0.8735078128518565 0.8505757976636718 0.9650737157122755 0.9060143873606267 1.0 18.40576808554896 -6.257870242529902 24.99684428727896 0.9125727907413612 0.9871311479639739 0.23011005736847434 0.05754619103901507 420.8427309507613 2947424.844802654 0.019216723334113596 0.018499910539377037 5.522424123060033e-07 6.257870242529902 0.07455835722261273 LASS(ph)VLR ddPTM_KYSE-520_SHP099_60min_R1 1 LASSVLR 7 0 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 1 LAS(0.142)S(0.858)VLR 115.49 0.0027509 98284000.0 107990.0 144320.0 164810.0 152870.0 151170.0 131770.0 145490.0 139370.0 171430.0 160490.0 True False 101999.57942727214 137386.65057126363 175433.9163053235 167398.7188379586 163066.2189603579 130947.57455240034 160197.54904556694 138886.5579992024 140302.6333986232 159068.18345933047 0.6412318114725358 0.8636966084822976 1.1028850175445508 1.0523708462463082 1.0251340991899214 0.8232166339278035 1.0070998835950447 0.8731259449801413 0.8820282620156713 1.0 17.279285773614813 -4.360658196386944 3.4465095042474347 0.9677863468749134 0.6302208670629734 0.5862391697005699 0.08371924563754518 0.18905170027709475 3.6455763423135874 0.02274310722105961 0.138945020380918 4.358547703424018e-05 4.360658196386944 -0.33756547981193996 LAST(ph)SDIEEK ddPTM_KYSE-520_SHP099_60min_R1 2 LASTSDIEEK 10 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YHI8;H0YIS4;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LAS(0.487)T(0.495)S(0.018)DIEEK;LAS(0.055)T(0.89)S(0.055)DIEEK 193.73 1.2267e-05 938260000.0 689390.0 743050.0 621580.0 663740.0 1004150.0 1652930.0 1975350.0 2992100.0 2867600.0 2415800.0 True False 651148.1624351067 707352.7626592108 661648.0413631645 726821.6500392928 1083170.892168045 1642613.4507467486 2175037.655558183 2981721.1034613936 2346916.1263133166 2394397.8914639624 0.2719465151370423 0.2954198903953792 0.27633170064254664 0.3035509063177907 0.4523771491904305 0.6860235955781083 0.908386055347025 1.2452905651526176 0.9801696429319795 1.0 21.191231482818505 -6.4975900251031 1.3607169769965761 1.0918374136984774 0.2831349870476011 0.9530595280217241 0.07569558696306034 0.07799969759763267 0.2934375008325677 0.038969357890925586 0.02881449916919929 3.1798744623649594e-07 6.4975900251031 -0.8087024266508763 down LASYLDR ddPTM_KYSE-520_SHP099_60min_R1 1 LASYLDR 7 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 143.85 0.011695 346290000.0 398620.0 457430.0 302230.0 315330.0 405130.0 445640.0 335130.0 382030.0 366480.0 367960.0 False True 376507.753970731 435454.37618357164 321712.22938509757 345298.86839257873 437011.4261256185 442858.5954582354 369008.21095361066 380704.8270964721 299936.4702089915 364700.16066854773 1.0323761669875282 1.1940065378236229 0.8821280166023313 0.9468020736804622 1.1982759352902774 1.2143087478941936 1.0118125812644712 1.0438844512669956 0.8224193530903987 1.0 18.47635130968985 -7.626985092484224 6.861560717125306 0.91273583188718 1.0690058182666022 0.23731884443878204 0.11125097750319128 0.324933497808567 18.641583810508564 0.08068884716777502 0.029800427969340286 2.3605592599306653e-08 7.626985092484224 0.15626998637942224 LAT(ph)KSSPVKVGEK ddPTM_KYSE-520_SHP099_60min_R1 1 LATKSSPVKVGEK 13 2 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 LAT(0.372)KS(0.256)S(0.372)PVKVGEK 67.646 0.061127 374000000.0 316840.0 377720.0 380940.0 305890.0 235890.0 208660.0 187030.0 191310.0 471660.0 259340.0 True False 299264.2535951191 359573.7642307211 405496.00192555017 334961.6936308177 254453.20096949657 207357.6755415032 205936.81763689863 190646.39026208958 386018.43358102243 257042.44936346705 1.1642600447366145 1.398888647074286 1.5775448877401748 1.3031376508444723 0.9899267673476407 0.8067059587044791 0.8011782417529671 0.7416922408504942 1.5017692001338612 1.0 17.97164710789881 -5.7366084009792475 3.856188882106736 0.9393344785072706 1.3894049577234209 0.4260853753633107 0.21981121561817066 0.19745651145917797 6.326131263965967 0.06869031228915769 0.0861125595092881 1.8339673471875657e-06 5.7366084009792475 0.4500704792161503 LAT(ph)PAGLKK ddPTM_KYSE-520_SHP099_60min_R1 2 LATPAGLKK 9 1 Q15054-3;Q15054-2;Q15054 Q15054-3 POLD3 DNA polymerase delta subunit 3 1 LAT(1)PAGLKK;LAT(1)PAGLKK 67.726 0.030897000000000004 1553960000.0 3538100.0 3494400.0 2654500.0 2208500.0 2326600.0 3228200.0 2378300.0 2756700.0 3637300.0 3173200.0 True False 3341834.5399725097 3326523.7787986672 2825613.3173501673 2418395.175990266 2509690.1834568265 3208051.606360012 2618721.7739712135 2747137.6511186142 2976858.0088713276 3145087.916712243 1.0625567960166717 1.0576886455613268 0.8984210909766737 0.7689435844192125 0.7979713921893676 1.0200196914411184 0.8326386553634809 0.8734692714060499 0.9465102686169814 1.0 21.584668915596296 -4.774464093054142 5.4373415951747734 0.8815817290578958 1.062510298521607 0.42705231541752053 0.07719981603516869 0.13899399419575093 12.429942895469425 0.020398541581667214 0.048264607336705456 1.6808768928453752e-05 4.774464093054142 0.18092856946371128 LATEEPPPRS(ph)PPESESEPYTFSHPNNGDVSSK ddPTM_KYSE-520_SHP099_60min_R1 1 LATEEPPPRSPPESESEPYTFSHPNNGDVSSK 32 1 Q9H5V8-2;Q9H5V8 Q9H5V8-2 CDCP1 CUB domain-containing protein 1 1 LATEEPPPRS(1)PPESESEPYTFSHPNNGDVSSK 248.4 1.4709000000000001e-31 823990000.0 456110.0 686750.0 558950.0 1174100.0 757510.0 1002600.0 910670.0 1206300.0 1585300.0 971830.0 True False 430808.6690672568 653757.499167235 594980.8113516201 1285686.110993964 817121.7273576807 996342.4015044135 1002729.4108827147 1202115.6268525354 1297449.4821608656 963220.3422722986 0.447258690624153 0.6787206109299758 0.6176995908828319 1.3347788191027483 0.8483227476592096 1.034386793736081 1.0410176850264723 1.2480172750677871 1.3469913634715178 1.0 19.877506335165517 -4.4662917314333415 0.6143355216134114 1.162638072551485 0.07385605160070186 0.6433594007615699 0.1749824122789386 1.8071996944897994 0.6155610379946415 0.09014219156054694 1.344979435973637 3.417497995955632e-05 4.4662917314333415 -1.0887820209507832 LATKS(ph)SPVK ddPTM_KYSE-520_SHP099_60min_R1 2 LATKSSPVK 9 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 LATKS(0.5)S(0.5)PVK;LAT(0.002)KS(0.499)S(0.499)PVK 120.55 0.0011797 1635850000.0 6340800.0 7678300.0 6973100.0 4368100.0 5583000.0 5928100.0 4489700.0 4589200.0 9299000.0 5504100.0 True False 5989063.183928574 7309422.94263673 7422597.183354474 4783242.910682847 6022350.337075324 5891100.528982958 4943562.6912494395 4573281.136327332 7610536.008713738 5455337.9561250005 1.0978354103991546 1.339866201035272 1.360611797665207 0.8768004749022823 1.1039371686063386 1.0798781993641116 0.9061881648778581 0.8383130748467497 1.3950622436083875 1.0 22.379237143054166 -5.253202373794042 24.815379631347934 1.022035606342963 1.2734806481804248 0.31149758122142446 0.16149491609868835 646.2776350068905 1947015.6226503116 0.043084316605168184 0.07305775865448556 5.582100178100311e-06 5.253202373794042 0.25144504183746186 LATNT(ph)SAPDLK ddPTM_KYSE-520_SHP099_60min_R1 2 LATNTSAPDLK 11 0 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-4;B5MEG9;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 LAT(0.002)NT(0.805)S(0.193)APDLK;LAT(0.007)NT(0.815)S(0.179)APDLK 115.34 0.0072786000000000005 434100000.0 6319000.0 5138600.0 4428000.0 4098200.0 4300500.0 4280400.0 3860500.0 4294800.0 5107600.0 4629100.0 True False 5968472.473385799 4891733.942804147 4713435.965050505 4487691.695831244 4638924.883502141 4253684.435866242 4250757.014849203 4279902.341213855 4180188.5921181096 4588089.775385305 1.300862181338762 1.0661809559716693 1.027319907805133 0.9781176732650942 1.011079798043526 0.9271144733668644 0.9264764254732192 0.9328288134585229 0.9110956404001619 1.0 22.129462190241124 -1.0000000000000737 0.6587226249385789 0.9420702476858096 34.47771343902511 0.9203584097273467 0.030749399166307003 56.86799122498091 0.3549058809730168 0.012702967635035702 2786.27304144379 0.09999999999998302 1.0000000000000737 33.5356431913393 LATNTS(ph)APDLK ddPTM_KYSE-520_SHP099_60min_R1 8 LATNTSAPDLK 11 0 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-4;B5MEG9;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 LATNT(0.014)S(0.986)APDLK;LATNT(0.012)S(0.988)APDLK;LATNT(0.007)S(0.993)APDLK;LATNT(0.077)S(0.923)APDLK;LATNT(0.064)S(0.936)APDLK;LATNT(0.243)S(0.757)APDLK;LATNT(0.041)S(0.959)APDLK;LATNT(0.051)S(0.949)APDLK 236.42 3.8599e-14 11047720000.0 34882900.0 26337500.0 21214300.0 17944300.0 19345700.0 19305100.0 17244000.0 19977700.0 23403000.0 21136800.0 True False 32947875.99966288 25072206.966606557 22581807.722080138 19649720.876849465 20868096.52802403 19184609.710036755 18987191.805222053 19908402.02153025 19153605.14162036 20949544.39618156 1.5727251808716296 1.196790082517328 1.0779140250036219 0.9379545686173006 0.9961121890473008 0.9157530754479559 0.9063295815007231 0.950302385819852 0.9142731115962339 1.0 24.320415533218895 -3.692391820423622 0.8768503700474067 0.9348044468264657 2.7631862117343946 0.970426444767992 0.033542879810671555 0.7515938508872382 0.22436431877773744 0.010944742980640987 1.6695770882888072 0.00020305242455967863 3.692391820423622 1.8283817649079288 LATQS(ph)NEITIPVTFESR ddPTM_KYSE-520_SHP099_60min_R1 2 LATQSNEITIPVTFESR 17 0 P04792;C9J3N8 P04792 HSPB1 Heat shock protein beta-1 1 LATQS(1)NEITIPVTFESR;LATQS(1)NEITIPVTFESR 211.67 6.1853e-18 296280000.0 373580.0 367316.0 316376.0 273349.0 313244.0 364775.0 265353.0 387588.0 409310.0 370047.0 True False 352856.7726867327 349669.58800744335 336770.10317949817 299328.0067746263 337894.5206854419 362498.303918584 292177.4708357161 386243.54769171885 334989.62186542875 366768.6714722095 0.9620690100666601 0.9533791057013391 0.9182084768246506 0.8161220683683905 0.9212742171492817 0.9883567821196826 0.7966260304156179 1.0530985270397746 0.9133539691947525 1.0 18.484510886974032 -7.286657119268207 24.995852410719337 0.9874196635582255 0.9102095036364429 0.24317821076491508 0.06523634055788748 1213.3092153538005 1202626.8396428765 0.034954807494030675 0.01680264648641029 5.1682424721556274e-08 7.286657119268207 -0.0772101599217826 LAVEALS(ph)SLDGDLAGR ddPTM_KYSE-520_SHP099_60min_R1 4 LAVEALSSLDGDLAGR 16 0 P12277;G3V4N7 P12277 CKB Creatine kinase B-type 1 LAVEALS(0.706)S(0.294)LDGDLAGR;LAVEALS(0.634)S(0.366)LDGDLAGR;LAVEALS(0.5)S(0.5)LDGDLAGR;LAVEALS(0.5)S(0.5)LDGDLAGR 137.46 1.9285e-05 70684000.0 217449.0 243320.0 204609.0 170265.0 192596.0 211985.0 164413.0 208841.0 268320.0 232172.0 True False 205386.67049616505 231630.54196923418 217798.42352597526 186446.9344079611 207752.20947866034 210661.92298315692 181033.47055624973 208116.57931485568 219599.85179676034 230115.1367070828 0.8925387240284197 1.006585421905906 0.9464758670057168 0.8102332470431632 0.902818530113086 0.9154631285785942 0.7867082241820976 0.9044019541390299 0.954304244993203 1.0 17.81199635992841 -1.2052346408261703 18.739423472034396 0.9064242888705561 0.052306655997621965 0.0 0.06823601610168657 0.0 0.0 0.015925869952055777 0.0 0.06233979347518929 1.2052346408261703 -0.8541176328729342 LAVISDS(ph)GEKR ddPTM_KYSE-520_SHP099_60min_R1 1 LAVISDSGEKR 11 1 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 LAVIS(0.005)DS(0.995)GEKR 119.87 0.00015061 258670000.0 183950.0 170800.0 155840.0 143950.0 176220.0 137630.0 174240.0 151970.0 175140.0 165930.0 True False 173745.92680476612 162594.5116239731 165885.695752816 157630.9647198545 190087.5114453546 136771.00011874374 191853.87961852763 151442.85154006473 143338.99092011258 164459.9892915864 1.0564632014946556 0.9886569513007459 1.0086690171109147 0.9584760731096481 1.1558283097558204 0.8316369270598074 1.1665687225503345 0.9208492119719017 0.8715736364665182 1.0 17.327377114496706 LAVLSS(ph)SLTHWK ddPTM_KYSE-520_SHP099_60min_R1 1 LAVLSSSLTHWK 12 0 F5GX19;F5H3Y3;Q6IAA8 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LAVLS(0.026)S(0.767)S(0.206)LTHWK 164.88 2.025e-06 2155300000.0 929070.0 1665700.0 1390600.0 3298700.0 1860600.0 2017700.0 2132900.0 2095400.0 2663300.0 1910300.0 True False 877532.6350448716 1585677.2717333268 1480240.3010386676 3612207.456209677 2007018.634634133 2005106.7858721896 2348514.3470980097 2088131.5464700372 2179711.856329426 1893376.2281909094 0.4634750463109701 0.8374866273928114 0.7817993481691768 1.9078128279138071 1.0600210379486 1.0590112815496986 1.24038440545014 1.1028613940427536 1.1512301801803575 1.0 20.852529683278732 -5.027351723445957 24.859507315210966 1.219840554647396 0.6902710616036745 0.46710355607552445 0.25786943671677265 564.1384354813592 512735.8306133834 0.06929209171837478 0.1204443857913963 9.389625619707965e-06 5.027351723445957 -0.5295694930437216 LAVLSSS(ph)LTHWK ddPTM_KYSE-520_SHP099_60min_R1 3 LAVLSSSLTHWK 12 0 F5GX19;F5H3Y3;Q6IAA8 F5GX19 LAMTOR1 Ragulator complex protein LAMTOR1 1 LAVLS(0.01)S(0.033)S(0.648)LT(0.309)HWK;LAVLS(0.074)S(0.074)S(0.767)LT(0.085)HWK;LAVLS(0.011)S(0.098)S(0.891)LTHWK 164.68 2.0464e-06 2174524000.0 973550.0 1787800.0 1549930.0 3468060.0 1996220.0 2013850.0 2258060.0 2451320.0 2969230.0 1972720.0 True False 919545.2407761908 1701911.4044574902 1649840.9677756815 3797663.3796897414 2153311.1570618884 2001280.8151502698 2486326.7413418973 2442816.943062391 2430092.6801971295 1955243.2355529375 0.47029710884852943 0.8704346208752868 0.8438034397848772 1.9422971580391493 1.1013009112663867 1.0235457045753762 1.271620172944248 1.249367290290903 1.2428595256128867 1.0 20.89891666171506 -5.021257139407274 24.599362827418283 1.2663425976583098 0.7170538868237868 0.46710977675472365 0.26444736000901936 526.8009724555238 609630.3626915918 0.07130050587690206 0.1252168130741477 9.522321943337193e-06 5.021257139407274 -0.549288710834523 LAVRPLS(ph)VQAEILK ddPTM_KYSE-520_SHP099_60min_R1 2 LAVRPLSVQAEILK 14 1 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 LAVRPLS(1)VQAEILK;LAVRPLS(1)VQAEILK 128.79 2.9081999999999997e-05 629470000.0 179518.0 219085.0 162303.0 155515.0 159496.0 184139.0 163844.0 194894.0 205210.0 188929.0 True False 169559.77867973928 208559.82774671083 172765.3110739816 170295.09884271014 172047.4277918978 182989.7201981059 180406.95048334487 194217.95820260164 167949.03692312585 187255.23604453768 0.9055008674866126 1.1137730092476879 0.9226193869040344 0.9094277011415923 0.9187856715044124 0.9772208460679986 0.9634280690577647 1.0371830572278786 0.8968990158607903 1.0 17.51464653442858 LAVYIDR ddPTM_KYSE-520_SHP099_60min_R1 1 LAVYIDR 7 0 P02545-3;P02545;P02545-2;P02545-6;Q3BDU5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 110.9 0.022403 207400000.0 185370.0 185080.0 157800.0 135600.0 207670.0 200150.0 132670.0 157410.0 166070.0 162350.0 False True 175087.1565740662 176188.47898925646 167972.04048892704 148487.38323037347 224012.44751933243 198900.78960812712 146081.57833442383 156863.98144977033 135915.8742840189 160911.70530638864 1.0880945934957706 1.094938858884005 1.0438770763698946 0.9227879534782241 1.3921451338347013 1.236086518562489 0.9078368665366694 0.9748450627074574 0.8446612011551572 1.0 17.295909751233076 -6.778033776498946 24.985563138271928 0.9297394674464919 1.1267063403834026 0.3879584431956883 0.12167758503890265 286.08997843130675 430750.96893963136 0.05463287042420256 0.03694639712216316 1.6671175503373637e-07 6.778033776498946 0.19696687293691062 LAWVGDVFTATPAEPRPLT(ph)SPLR ddPTM_KYSE-520_SHP099_60min_R1 3 LAWVGDVFTATPAEPRPLTSPLR 23 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 LAWVGDVFTATPAEPRPLT(0.5)S(0.5)PLR;LAWVGDVFTATPAEPRPLT(0.5)S(0.5)PLR;LAWVGDVFTATPAEPRPLT(0.5)S(0.5)PLR 201.6 4.7595e-16 2478600000.0 547277.0 729581.0 652486.0 370300.0 478930.0 564314.0 376426.0 503181.0 832162.0 493769.0 True False 516918.4538403477 694530.8336365925 694546.2915745127 405493.200665245 516619.06626105844 560791.9070043502 414478.8136437316 501435.5825543277 681062.3578968964 489394.5908064694 1.0562406359835772 1.4191632819073066 1.4191948677446056 0.8285608551517417 1.0556288850878512 1.1458890587250377 0.8469215259627518 1.0246038513176372 1.391642594117314 1.0 18.900638630084174 -5.2475434140377155 24.847780548836507 1.0396993110650272 1.310295966069452 0.3091742502348923 0.17527006321857744 871.8429823028484 1558964.7874653204 0.04756979102987896 0.08185593977558965 5.655312212085592e-06 5.2475434140377155 0.27059665500442476 LAWVGDVFTATPAEPRPLTS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 1 LAWVGDVFTATPAEPRPLTSPLR 23 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 LAWVGDVFTATPAEPRPLT(0.158)S(0.842)PLR 135.75 7.9227e-07 2120900000.0 188610.0 276870.0 245300.0 141740.0 172290.0 237590.0 139400.0 176850.0 252880.0 194050.0 True False 178147.4273152863 263568.7496096575 261112.430493877 155210.92698431492 185848.24280399567 236107.11268046452 153491.9124128945 176236.5486271003 206963.366586034 192330.86796861546 0.9262549958665833 1.3703923472786834 1.357621026992325 0.8069995660272392 0.9662944111203323 1.22760904255365 0.7980617673806853 0.9163196240338216 1.0760798241694947 1.0 17.553230799732436 -5.256280317937396 24.99819944120694 0.9700990642869625 1.2333197444063966 0.3254182790159662 0.16311678918106942 489.77910130499725 2373213.081623834 0.04475485943294899 0.07458069461315572 5.542678420243795e-06 5.256280317937396 0.2632206801194341 LAYIAHPK ddPTM_KYSE-520_SHP099_60min_R1 2 LAYIAHPK 8 0 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 0 ; 119.89 0.0016151 1620490000.0 3973800.0 3409700.0 2991900.0 2328300.0 4788500.0 3609200.0 2717800.0 3935800.0 3379700.0 2650100.0 False True 3753365.392426098 3245892.8939359556 3184762.661209255 2549580.9319710825 5165327.707161961 3586673.644035235 2992541.747171912 3922147.628422625 2766031.6753037805 2626622.1757466015 1.4289704195310187 1.2357669572378944 1.2124936317892792 0.970669080430793 1.9665286293769098 1.3655080190647308 1.1393118411944039 1.4932287043939916 1.053075581575623 1.0 21.324777261467403 -9.952112758936492 6.776729537181471 0.9999999744363476 1.3229460428611604 0.11413520352489037 0.26583791922686734 1.0190306422123684e-07 1.5752836808721084e-08 0.25585902744889016 0.0620549235953719 1.1165733063472192e-10 9.952112758936492 0.32294606842481277 LCAAAASILGKPADR ddPTM_KYSE-520_SHP099_60min_R1 1 LCAAAASILGKPADR 15 1 J3KQ18;P30046;B5MC82;P30046-2;A6NHG4 J3KQ18 DDT;DDTL D-dopachrome decarboxylase;D-dopachrome decarboxylase-like protein 0 103.66 0.00092639 231580000.0 548160.0 469520.0 432870.0 316110.0 611100.0 499490.0 397740.0 450720.0 437790.0 348370.0 False True 517752.4720701313 446963.55443611246 460773.4928164878 346152.999358063 659190.0933166273 496372.4976335915 437947.44076832617 449156.5575188385 358298.3717878042 345283.71282775886 1.4994986813305227 1.2944820095208938 1.3344779255381205 1.0025176007382015 1.9091259414412558 1.4375786612361925 1.2683698202318383 1.3008333171593747 1.0376926523798635 1.0 18.397422757725113 -7.657024011977453 1.635311860360256 0.9881090675977264 1.3977937000996838 0.32218514162833456 0.21446292196395275 0.4685844214877237 2.3258102920785104 0.20273639865960655 0.06272461247126987 2.2028046674505308e-08 7.657024011977453 0.4096846325019574 LCAGIMITAS(ph)HNPK ddPTM_KYSE-520_SHP099_60min_R1 1 LCAGIMITASHNPK 14 0 Q96G03;Q96G03-2 Q96G03 PGM2 Phosphoglucomutase-2 1 LCAGIMIT(0.006)AS(0.994)HNPK 111.34 0.00010934 411750000.0 400460.0 447570.0 412840.0 296860.0 347410.0 389590.0 289980.0 320300.0 370920.0 417850.0 True False 378245.6855027814 426068.0653837341 439452.32696735504 325073.4851457868 374749.19050749374 387158.4242989275 319294.0083320743 319188.9540585817 303570.27813228307 414148.1740823807 0.9133100401585793 1.0287817067593357 1.0610992742900296 0.7849207252115626 0.9048674217574846 0.9348306923162131 0.7709656309351773 0.7707119674396774 0.732999194804848 1.0 18.6597875024704 -5.262592776830697 24.999901228279143 0.8366359405204797 1.003835480061603 0.41053885514347865 0.08669226078943386 99.51098169549903 2156917.9688644498 0.024634841055213953 0.03898733679684531 5.462698396763336e-06 5.262592776830697 0.1671995395411232 LCDDGPQLPTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 10 LCDDGPQLPTSPR 13 0 O60504-2;O60504;H0YB51;H0YAZ3 O60504-2 SORBS3 Vinexin 1 LCDDGPQLPT(0.002)S(0.998)PR;LCDDGPQLPT(0.001)S(0.999)PR;LCDDGPQLPTS(1)PR;LCDDGPQLPTS(1)PR;LCDDGPQLPT(0.238)S(0.762)PR;LCDDGPQLPT(0.001)S(0.999)PR;LCDDGPQLPTS(1)PR;LCDDGPQLPT(0.004)S(0.996)PR;LCDDGPQLPT(0.012)S(0.988)PR;LCDDGPQLPT(0.025)S(0.975)PR 299.56 6.1743e-45 29092390000.0 30754250.0 27308080.0 25444240.0 21525390.0 23619830.0 28158020.0 24899430.0 28380020.0 34257710.0 28283980.0 True False 29048250.445422586 25996158.84653625 27084416.42262344 23571156.59375554 25478576.242550913 27982275.352492787 27416507.379418932 28281576.334566474 28037373.430591814 28033405.941803448 1.0362012559489178 0.9273278780503351 0.9661479050690421 0.8408238600293018 0.9088648127681563 0.998176083583393 0.9779941629759444 1.0088526664679354 1.0001415271764196 1.0 24.740643700656083 -6.273700775811094 24.08652538504569 0.9963962672020947 0.9317998215818172 0.301908882084038 0.04628830386105823 613.1073011950732 1204395.3619771162 0.01693531714592414 0.015056189487364386 5.324750024142107e-07 6.273700775811094 -0.06459644562027755 LCDFGSASHVADNDITPY(ph)LVSR ddPTM_KYSE-520_SHP099_60min_R1 6 LCDFGSASHVADNDITPYLVSR 22 0 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 LCDFGSASHVADNDITPY(1)LVSR;LCDFGSASHVADNDIT(0.001)PY(0.998)LVS(0.001)R;LCDFGSASHVADNDIT(0.002)PY(0.998)LVSR;LCDFGSASHVADNDITPY(1)LVSR;LCDFGSASHVADNDIT(0.002)PY(0.998)LVSR;LCDFGSASHVADNDIT(0.171)PY(0.827)LVS(0.002)R 300.0 1.3588999999999998e-51 17501730000.0 2832610.0 5148470.0 6143040.0 8471640.0 3003720.0 3642850.0 2678140.0 2502370.0 3654110.0 3780150.0 True False 2675479.476631957 4901129.773188974 6539030.18761153 9276782.118508553 3240095.675171034 3620113.6219034004 2948872.5273276097 2493689.862527546 2990615.7366169477 3746660.8119122013 0.7140970616089637 1.3081327665440738 1.7452954819985889 2.4760133313946606 0.8647955707304529 0.9662240068259036 0.787066851088284 0.6655766261517625 0.7982082944654424 1.0 21.837173944610118 -5.947889534225062 24.99999866304228 0.8297112548121877 1.5703047769438245 0.41399161987885813 0.4159495998162941 103.46036318972004 49634.522587927946 0.137337426284283 0.1557259824372456 1.1274842030324907e-06 5.947889534225062 0.7405935221316369 LCDFGSASHVADNDITPYLVS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 LCDFGSASHVADNDITPYLVSR 22 0 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 LCDFGSASHVADNDIT(0.074)PY(0.429)LVS(0.497)R 89.02799999999999 0.0019173999999999999 262600000.0 99048.0 96563.0 108100.0 143100.0 92845.0 81860.0 85699.0 118240.0 110460.0 117920.0 True False 93553.60999270726 91923.968535982 115068.29896611541 156700.18097541636 100151.37328421262 81349.0813755747 94362.29126164014 117829.85303742354 90403.24846999887 116875.32054037177 0.8004564997996426 0.7865130817265145 0.9845388952440804 1.3407465344344278 0.8569077955993091 0.6960330119263682 0.8073756788461167 1.008167100570407 0.7735016088257165 1.0 16.834610796154696 -5.958086730299037 24.999897354701062 0.8457602170545514 0.9815917913058396 0.10997894142317566 0.1670764297265334 330.47925194085843 197118.6228874565 0.05562110543985782 0.06306836016109266 1.101319349816403e-06 5.958086730299037 0.13583157425128822 LCEGFNEVLK ddPTM_KYSE-520_SHP099_60min_R1 1 LCEGFNEVLK 10 0 Q9Y6H1 Q9Y6H1 CHCHD2 Coiled-coil-helix-coiled-coil-helix domain-containing protein 2 0 96.89 0.019787 24271000.0 55849.0 55437.0 52022.0 49640.0 61626.0 58239.0 52838.0 52835.0 65646.0 56637.0 False True 52750.94463777867 52773.72330736657 55375.42135814299 54357.77067518977 66475.61559602438 57875.50879833988 58179.3806891859 52651.7277167817 53726.341200991796 56135.24024291922 0.9397117463024052 0.9401175282940618 0.986464493934858 0.9683359408450442 1.1842047047159376 1.0310013557952158 1.0364145666326692 0.937944283999445 0.9570875793618558 1.0 15.776619121186627 -5.152209076896812 2.292835299731224 1.0231913083818003 0.9436347859688229 0.18380873840331358 0.06406240872546465 0.5493105437803241 5.620339537695462 0.020458393720941853 0.04292836722407118 7.0435389914788685e-06 5.152209076896812 -0.07955652241297739 LCLEPQAAVVK ddPTM_KYSE-520_SHP099_60min_R1 1 LCLEPQAAVVK 11 0 Q9NYY1-2 Q9NYY1-2 0 55.426 0.050445 0.0 167360.0 163740.0 138660.0 126200.0 147140.0 149570.0 149470.0 130930.0 189550.0 148840.0 False True 158076.2071761115 155873.6846212493 147598.24546384407 138194.01005658656 158719.0808879211 148636.47814982553 164579.88628662363 130475.83438929167 155132.49816665132 147521.39339576778 1.071547682253973 1.0566174914242719 1.000520955410651 0.9367726732748661 1.075905516036663 1.0075588003094997 1.1156340277039793 0.8844536469314211 1.0515932272308777 1.0 17.1705646621854 -4.684447608810223 5.0311424488467695 1.0085218630273731 1.0671605212878916 0.11266076589064578 0.062129165625769874 0.4324773702122219 19.250148004092175 0.015530525496316604 0.042859304490386066 2.068008841475836e-05 4.684447608810223 0.058638658260518506 LCPSCPASS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 12 LCPSCPASSPK 11 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 LCPSCPAS(0.002)S(0.998)PK;LCPSCPASS(1)PK;LCPSCPAS(0.038)S(0.962)PK;LCPSCPASS(1)PK;LCPSCPASS(1)PK;LCPSCPASS(1)PK;LCPSCPAS(0.009)S(0.991)PK;LCPSCPASS(1)PK;LCPSCPASS(1)PK;LCPSCPASS(1)PK;LCPSCPASS(1)PK;LCPSCPASS(1)PK 324.96 1.2829999999999999e-38 29062720000.0 32142430.0 33337390.0 25781030.0 21960800.0 23493410.0 30606530.0 24189790.0 29392680.0 33927640.0 30810890.0 True False 30359425.33355438 31735811.743957423 27442916.444906466 24047947.829244718 25342207.707782377 30415503.29335416 26635130.042799912 29290723.65338311 27767235.82220416 30537929.485109676 0.9941546740540371 1.0392260470518093 0.8986502001809802 0.7874780063583067 0.8298600506016383 0.9959910120358615 0.8721982954275674 0.9591587952177733 0.9092704151977131 1.0 24.864098912894185 -4.767808006013957 24.950574382863397 0.9000895034991365 1.0166903709065518 0.3113685517497069 0.06493220493702397 150.96502610056277 591449.4858569052 0.017528043657327255 0.037981050196457825 1.7068367848944735e-05 4.767808006013957 0.11660086740741527 LCS(ph)PLSEPGDPSK ddPTM_KYSE-520_SHP099_60min_R1 1 LCSPLSEPGDPSK 13 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 LCS(1)PLSEPGDPSK 117.7 0.00011647 174720000.0 341040.0 376860.0 311050.0 280910.0 322270.0 396480.0 329250.0 450770.0 490860.0 481710.0 True False 322121.83135361515 358755.07992160734 331100.78069759684 307607.6019413285 347630.815534527 394005.4212532115 362533.8031703407 449206.3840805091 401732.1975736351 477442.4241647094 0.6746820455202964 0.7514101423836668 0.6934883955418524 0.6442820880014826 0.7281104441916967 0.8252417491858378 0.7593246532387595 0.9408598007736754 0.8414254310903976 1.0 18.8649672402966 -7.219066699104006 0.6028380023007769 0.9867015999313891 0.6863744156214827 0.7944333534701669 0.0498079477661039 0.329591738377936 0.2484298832730835 0.0472172993869763 0.02701757223675704 6.038558818491706e-08 7.219066699104006 -0.30032718430990635 LCS(ph)SSDTLVSEGEENQKPK ddPTM_KYSE-520_SHP099_60min_R1 3 LCSSSDTLVSEGEENQKPK 19 1 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 LCS(0.829)S(0.165)S(0.005)DT(0.001)LVSEGEENQKPK;LCS(0.979)S(0.021)SDTLVSEGEENQKPK;LCS(0.35)S(0.273)S(0.343)DT(0.034)LVSEGEENQKPK 216.38 8.1531e-19 2449610000.0 1124040.0 941520.0 783090.0 867020.0 836000.0 1030680.0 1050070.0 1318700.0 1286290.0 1105430.0 True False 1061687.2604818132 896287.9659496681 833569.2343883007 949421.3201209329 901788.4438106709 1024247.143808667 1156221.3232956112 1314125.7374868942 1052732.1607321652 1095636.7502115269 0.9690139184148768 0.8180521197163458 0.760808027137981 0.86654753040881 0.8230724678015491 0.9348419023101614 1.055296222103163 1.1994173591139448 0.9608404980290426 1.0 20.063338132647605 -6.602464292202478 2.8235428071425552 1.0721091135543919 0.8429413955668373 0.6147861632897949 0.07640046154099313 0.16409557642733646 2.6508697848356726 0.031804364738765974 0.023853366048948214 2.4976737400520676e-07 6.602464292202478 -0.22916771798755453 LCS(ph)SSSSDTSSR ddPTM_KYSE-520_SHP099_60min_R1 3 LCSSSSSDTSSR 12 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LCS(0.393)S(0.393)S(0.21)S(0.003)SDTSSR;LCS(0.862)S(0.038)S(0.098)S(0.002)SDTSSR;LCS(0.653)S(0.271)S(0.035)S(0.035)S(0.005)DTSSR 184.96 7.264e-08 1308000000.0 1717390.0 1703080.0 1682920.0 1438170.0 1527090.0 1582770.0 1540310.0 1696210.0 2331180.0 1500930.0 True False 1622122.953167914 1621261.4804248041 1791403.7159672054 1574853.2443984214 1647263.2950464545 1572891.3453312807 1696019.5667769406 1690326.243408391 1907896.476265547 1487632.927905871 1.0904053834378105 1.0898262938472603 1.2041974080857096 1.0586302674916785 1.107304943407843 1.0573114616019068 1.1400793401127614 1.136252237833865 1.2825048709773301 1.0 20.504587155971517 -6.981538773625173 24.10463773139478 1.153260310387609 1.1033490263339012 0.05091486079179075 0.07425484902892245 392.0246714479307 511860.2259007311 0.029828949993055826 0.020106426192106553 1.0434249720357987e-07 6.981538773625173 -0.049911284053707705 LCSSAETLESHPDIGKS(ph)TPQK ddPTM_KYSE-520_SHP099_60min_R1 1 LCSSAETLESHPDIGKSTPQK 21 1 O96028-5;O96028-3;O96028;O96028-6 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 LCSSAETLESHPDIGKS(0.855)T(0.145)PQK 151.01 4.7094999999999997e-07 464080000.0 180850.0 241580.0 225880.0 172100.0 157400.0 170520.0 144790.0 140840.0 249260.0 210260.0 True False 170817.88998446308 229974.13418102707 240440.58622077815 188456.3322562482 169786.48451650652 169455.72142881775 159426.786214225 140351.45891230315 204000.66733326032 208397.25997980463 0.8196743565679161 1.1035372259851852 1.1537607847822893 0.9043129083103641 0.8147251289818311 0.8131379531824908 0.7650138309384429 0.6734803467469022 0.978902828919294 1.0 17.66897678353339 -5.496780486882451 5.230101682175537 0.8217871857101385 1.0343438196968857 0.3087022127523137 0.12128735204761702 0.19408544078035536 14.957273008564869 0.034697030185152106 0.049662869492110046 3.1858073736375355e-06 5.496780486882451 0.21255663398674718 LCSSSDTLVS(ph)EGEENQKPK ddPTM_KYSE-520_SHP099_60min_R1 6 LCSSSDTLVSEGEENQKPK 19 1 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 LCSSSDTLVS(1)EGEENQKPK;LCSSSDTLVS(1)EGEENQKPK;LCSSSDTLVS(1)EGEENQKPK;LCSSSDTLVS(1)EGEENQKPK;LCSSSDTLVS(1)EGEENQKPK;LCSSSDTLVS(1)EGEENQKPK 215.58 8.564699999999999e-19 6427230000.0 1942980.0 2293950.0 1856820.0 1791650.0 1741070.0 1737970.0 1436746.0 1730410.0 2189090.0 1758670.0 True False 1835199.0261653957 2183745.198710854 1976513.5882170415 1961927.8773207862 1878082.3036667998 1727122.6845627634 1581986.3069697008 1724407.61159073 1791606.4384681354 1743089.552024555 1.0528426517351663 1.2528014961563443 1.1339139666813849 1.1255462320005625 1.0774445303085285 0.9908399040983027 0.9075760365451467 0.9892822830518797 1.0278338461654075 1.0 20.73321525981067 -6.018262738585647 1.9775892638310641 0.976330132083229 1.152349383527367 0.6592815225724427 0.05374062220222196 0.1917427863566379 1.505940203807747 0.019846657134127255 0.021514063153000244 9.588203908221222e-07 6.018262738585647 0.176019251444138 LCVVLGPYGPEWQENPY(ph)PFQCTIDDPTK ddPTM_KYSE-520_SHP099_60min_R1 1 LCVVLGPYGPEWQENPYPFQCTIDDPTK 28 0 Q96RF0-3;Q96RF0-2;Q96RF0 Q96RF0-3 SNX18 Sorting nexin-18 1 LCVVLGPYGPEWQENPY(0.983)PFQCT(0.017)IDDPTK 85.46700000000001 0.0023768 7415900.0 8759.5 14546.0 9260.6 10367.0 11508.0 10096.0 6961.6 9856.5 14220.0 10242.0 True False 8273.593073369666 13847.188326008867 9857.553093483883 11352.276563047788 12413.614128436837 10032.987119078954 7665.346466668623 9822.310102024398 11638.006457028656 10151.263848155422 0.8150308372560973 1.3640851556158722 0.971066582539384 1.1183116440334275 1.222863902871809 0.9883485710897013 0.7551125240490608 0.9675947989283326 1.1464588676949214 1.0 13.309371735921157 -6.501412796461034 23.55177039604792 0.951325351864946 1.1069375484973414 0.12971187017590413 0.16204138609368826 645.126389160295 707814.5782599259 0.05571483170044546 0.04860036888773845 3.15200721944608e-07 6.501412796461034 0.15561219663239534 LCWFLDEAAAR ddPTM_KYSE-520_SHP099_60min_R1 2 LCWFLDEAAAR 11 0 M0R1L2;O95336 M0R1L2 PGLS 6-phosphogluconolactonase 0 ; 113.62 0.0038143 0.0 157443.0 148094.0 129622.0 94377.0 150794.0 156229.0 108626.0 152611.0 154085.0 128495.0 False True 148709.3229351607 140979.341946374 137977.6415225331 103346.5617045202 162660.62989950494 155253.91686079494 119606.97616759743 152081.62806067517 126107.04816675521 127356.6342675972 1.167660591773319 1.106965041571005 1.0833957910085736 0.8114737194402618 1.277205783859899 1.2190485227065673 0.9391499457836138 1.1941398179628924 0.9901882920506803 1.0 16.95851458894225 -7.826267250677096 24.9992521869794 0.9950921193943926 1.094479168805619 0.09315965607441556 0.1299001444161323 185.33917336990257 71464.63863207509 0.12516578620721655 0.0323176773245631 1.4918760751123985e-08 7.826267250677096 0.09938704941122645 LCYVALDFEQEMATAAS(ph)SSSLEK ddPTM_KYSE-520_SHP099_60min_R1 1 LCYVALDFEQEMATAASSSSLEK 23 0 P60709;A0A2R8Y793;Q6S8J3;A0A2R8YEA7;P63261;I3L4N8 P60709;P63261 ACTB;POTEE;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 1 LCYVALDFEQEMAT(0.001)AAS(0.529)S(0.377)S(0.078)S(0.015)LEK 99.441 0.0012444 39082000.0 47553.0 65522.0 53537.0 47323.0 37866.0 55380.0 41478.0 58885.0 62290.0 53398.0 True False 44915.14029544467 62374.22476947295 56988.08068222867 51820.56369182123 40845.83877193164 55034.35287783208 45671.00102626998 58680.74167886231 50979.7062031164 52924.93526301538 0.848657444212916 1.178541352190578 1.0767718543068803 0.9791332466311792 0.7717692722521898 1.0398567821450089 0.8629391949050802 1.1087541512756305 0.9632455089414473 1.0 15.691659979100523 -5.394040015591933 5.952168692366601 0.9553550055543398 1.048058541586411 0.07738068042499335 0.11520424233659732 0.517703641817638 22.847436607371957 0.03216266550584644 0.04796308645279592 4.03608203074792e-06 5.394040015591933 0.09270353603207115 LDADS(ph)DS(ph)GDDSDKR ddPTM_KYSE-520_SHP099_60min_R1 1 LDADSDSGDDSDKR 14 1 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 2 LDADS(1)DS(0.99)GDDS(0.01)DKR 156.24 8.5711e-06 0.0 343560.0 326820.0 288410.0 307430.0 334690.0 308490.0 309530.0 347170.0 380100.0 351810.0 True False 324502.04193011933 311119.07663317915 307001.3700723162 336648.0547678001 361028.198874394 306564.599481445 340820.3131216878 345965.748300087 311083.42154125124 348693.2371040385 0.9306232739848026 0.8922429331210446 0.8804339671799175 0.9654562203836362 1.035374823649577 0.8791813745156642 0.9774216327000295 0.9921779704516102 0.8921406796554368 1.0 18.41159885779123 -5.271805038110769 23.621982332961068 0.9628922518043795 0.9002143460289935 0.27670636607558674 0.04593347942964952 418.0801524813652 952750.2271779858 0.012687778002861663 0.01907867124911507 5.348043879449411e-06 5.271805038110769 -0.06267790577538601 LDAENAIVHMGGQWLGGR ddPTM_KYSE-520_SHP099_60min_R1 1 LDAENAIVHMGGQWLGGR 18 0 E7ETJ9;Q01085;Q01085-2 E7ETJ9 TIAL1 Nucleolysin TIAR 0 76.71300000000001 0.0075359 0.0 113470.0 112670.0 80815.0 121020.0 118570.0 126190.0 83244.0 101310.0 114570.0 72378.0 False True 107175.59290316293 107257.16407888205 86024.46420857192 132521.70441401008 127900.7844289847 125402.40140219608 91659.11590314907 100958.57925593172 93766.9760746676 71736.787229232 1.4940116088651654 1.4951486987582274 1.199168063293443 1.8473325825220237 1.782917654512223 1.7480905717380093 1.277714258519218 1.4073473758076547 1.307097511560408 1.0 16.130425514414938 -7.865910155488863 0.9493964499927728 1.016014534318711 1.5734387647527701 0.4542541219404872 0.19243367225475022 0.5398500643711583 1.081002604982416 0.1988638818783219 0.06942151232090109 1.3617263599686262e-08 7.865910155488863 0.5574242304340591 LDAMFR ddPTM_KYSE-520_SHP099_60min_R1 2 LDAMFR 6 0 K7EIV0;K7EKD8;K7ELJ7;A0A0C4DGQ5;Q96L46;P04632;K7EMQ1 K7EIV0 CAPNS1;CAPNS2 Calpain small subunit 2;Calpain small subunit 1 0 ; 148.37 0.051685 1001650000.0 896030.0 930610.0 561830.0 448570.0 778910.0 862210.0 633140.0 660340.0 595840.0 674200.0 False True 846325.4297084798 885902.0987259125 598046.4607597842 491201.9579325116 840205.7856083364 856828.6275694396 697143.9700509319 658049.4346645143 487650.47590407496 668227.1125196631 1.2665236322382476 1.3257500064393815 0.8949748514464628 0.7350823525857125 1.2573656020034847 1.2822416383834272 1.0432739962050221 0.9847691336306722 0.7297675696894527 1.0 19.3499789939312 -4.751902133085199 24.98620262545113 1.0030413611517977 1.2961369674778194 0.3268648832697294 0.17450166874140896 257.8173764415788 675430.2733355729 0.04858717602797013 0.12497765120204442 1.770507891829805e-05 4.751902133085199 0.2930956063260217 LDAQSLNLSQEDFDRYMSGQT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 LDAQSLNLSQEDFDRYMSGQTSPR 24 1 E9PFK9;Q9UJ41;Q9UJ41-4;Q9UJ41-3;A0A0A0MSJ3;Q3HKR1 E9PFK9 RABGEF1 Rab5 GDP/GTP exchange factor 1 LDAQSLNLSQEDFDRYMS(0.091)GQT(0.455)S(0.455)PR;LDAQSLNLSQEDFDRYMS(0.006)GQT(0.624)S(0.37)PR 124.9 0.0003474 1526390000.0 603875.0 572427.0 477374.0 417829.0 435346.0 352226.0 314453.0 296758.0 563346.0 392152.0 True False 570376.8499550328 544926.7476895559 508146.29186540644 457539.34253513 469605.2534200958 350027.6268823995 346240.97800553706 295728.6157618381 461056.5671969949 388677.8383696393 1.4674797316655719 1.4020010762005968 1.3073714055756134 1.177168588912451 1.2082120642378718 0.9005597755473704 0.8908173912304616 0.7608579305738422 1.1862177919146555 1.0 18.568215324882882 -5.620588340650639 0.9764671141543824 0.9266966866157046 1.442642874220963 0.7323836633894889 0.11496270991088883 0.28689509776434113 0.572959857732952 0.05129972519193237 0.0958372184453344 2.395585409685281e-06 5.620588340650639 0.5159461876052583 LDAQSLNLSQEDFDRYMSGQTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 LDAQSLNLSQEDFDRYMSGQTSPR 24 1 E9PFK9;Q9UJ41;Q9UJ41-4;Q9UJ41-3;A0A0A0MSJ3;Q3HKR1 E9PFK9 RABGEF1 Rab5 GDP/GTP exchange factor 1 LDAQSLNLSQEDFDRY(0.003)MS(0.015)GQT(0.113)S(0.869)PR;LDAQSLNLSQEDFDRYMS(0.001)GQT(0.073)S(0.925)PR;LDAQSLNLSQEDFDRYMSGQT(0.047)S(0.953)PR 176.87 6.4528e-11 1378613000.0 748210.0 872400.0 748890.0 578182.0 555421.0 570389.0 446137.0 451437.0 859470.0 558482.0 True False 706705.2997803437 830488.5945009023 797164.6476663668 633132.2434432437 599129.4727868022 566828.9906759439 491236.88183752913 449871.07041318767 703411.9134755573 553534.2839724207 1.276714596083726 1.5003381336038086 1.4401359965376321 1.143799511205685 1.0823710294639188 1.0240178559638875 0.8874552056869607 0.8127248545197645 1.270764853854299 1.0 19.07831314968254 -5.509258989488037 1.9373009139528492 0.9895746952063155 1.4197491184658628 0.6572363920019606 0.12595477752819179 0.19492176233168027 1.4653339515237465 0.040910800581089694 0.06534960400993926 3.0955727183234967e-06 5.509258989488037 0.43017442325954736 LDDDFKEMEK ddPTM_KYSE-520_SHP099_60min_R1 1 LDDDFKEMEK 10 1 Q99961-3;Q99961-2;Q99961 Q99961-3 SH3GL1 Endophilin-A2 0 95.01799999999999 0.011932 0.0 157610.0 142870.0 108250.0 97304.0 157770.0 139280.0 106530.0 118900.0 145570.0 139330.0 False True 148867.05911225444 136006.310747758 115227.96820612386 106551.74290448564 170185.60141149478 138410.70185670734 117299.09203260868 118487.56365146872 119138.15752107314 138095.64459709963 1.0779996686107003 0.9848703856270242 0.8344069687520322 0.7715793153024865 1.2323748653190263 1.0022814424055655 0.8494047178304149 0.8580108662888074 0.8627220494075984 1.0 17.075308293545792 -6.758660625518091 24.977382183258275 0.880701976558173 0.9788077082115316 0.11113599706249677 0.12432538500961397 170.07956612940228 1528814.2344271906 0.052071821337140466 0.03850769662706657 1.743168520508797e-07 6.758660625518091 0.09810573165335867 LDDDS(ph)DSPSFFEEKPEEPVVLALDPK ddPTM_KYSE-520_SHP099_60min_R1 2 LDDDSDSPSFFEEKPEEPVVLALDPK 26 1 A0A2R8Y6X0;A0A669KBJ7;Q9H2P0 A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein 1 LDDDS(0.851)DS(0.075)PS(0.075)FFEEKPEEPVVLALDPK;LDDDS(0.512)DS(0.478)PS(0.01)FFEEKPEEPVVLALDPK 67.283 0.018147 35754000.0 42785.0 41822.0 35814.0 36285.0 31681.0 31642.0 35639.0 48176.0 51365.0 39770.0 True False 40411.630760217035 39812.80834389816 38122.627744426056 39733.51549051697 34174.11445976775 31444.510540996045 39241.73792312157 48008.888700362906 42038.41080627827 39417.66874059182 1.0252161543638334 1.0100244285349995 0.9671456725488145 1.0080128216613657 0.8669745206056713 0.7977262873645007 0.9955367523475815 1.2179535278027225 1.0664864805408352 1.0 15.266554833864838 -7.0136105762825185 24.904726716240795 1.1066810546542438 0.9446133411963403 0.39158340648255996 0.082634273430461 605.5548896570451 1108045.712915425 0.03935662979264462 0.0239960803163254 9.691464822386954e-08 7.0136105762825185 -0.1620677134579035 LDDDSDS(ph)PSFFEEKPEEPVVLALDPK ddPTM_KYSE-520_SHP099_60min_R1 1 LDDDSDSPSFFEEKPEEPVVLALDPK 26 1 A0A2R8Y6X0;A0A669KBJ7;Q9H2P0 A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein 1 LDDDS(0.062)DS(0.839)PS(0.099)FFEEKPEEPVVLALDPK 59.536 0.026338999999999998 15282000.0 17392.0 19624.0 14304.0 14290.0 13660.0 16163.0 14288.0 16292.0 22027.0 13646.0 True False 16427.231089907542 18681.233583775465 15226.058727209205 15648.117303554827 14734.964285231776 16062.120721639572 15732.370477442153 16235.486854581384 18027.452055483125 13525.107056427352 1.2145730914640749 1.3812263005266074 1.1257625291752151 1.1569680918805434 1.089452691483834 1.1875780838279273 1.1631974824159246 1.2003961807360346 1.3328879379861311 1.0 13.72335239313319 -4.773792672256007 24.99618972136966 1.1630829036770833 1.2978997162956347 0.286974595880056 0.0884083596498617 248.2737293625084 502370.134240163 0.022457120867585112 0.047284827572227586 1.6834775442300434e-05 4.773792672256007 0.13481681261855138 LDDFLDLNHK ddPTM_KYSE-520_SHP099_60min_R1 4 LDDFLDLNHK 10 0 Q8WVY7 Q8WVY7 UBLCP1 Ubiquitin-like domain-containing CTD phosphatase 1 0 ;;; 164.64 0.00010715 982973000.0 1030545.0 914133.0 638179.0 615560.0 976493.0 984801.0 741886.0 739426.0 800412.0 863138.0 False True 973378.6145094744 870216.6785383928 679317.0394625035 674062.637325138 1053337.4436148487 978654.491665618 816883.0769896174 736861.103789325 655077.35754453 855491.2688312029 1.1378007584336105 1.0172128112158387 0.7940665956656767 0.7879246251642779 1.2312661531355533 1.1439678314925228 0.9548701509317178 0.8613309458973744 0.7657323708744751 1.0 19.706393605039047 -7.129786570797275 4.191479878156714 0.8612411399362206 1.0101374387233586 0.1592971092678328 0.14429859242453247 0.4667157817520204 13.556797880183664 0.07877813453830532 0.04382576311430308 7.416746395233054e-08 7.129786570797275 0.14889629878713795 LDDGHLNNS(ph)LS(ph)SPVQADVYFPR ddPTM_KYSE-520_SHP099_60min_R1 1 LDDGHLNNSLSSPVQADVYFPR 22 0 F8WF17;B9A055;U3KQ88;Q3ZCW2 F8WF17 LGALSL Galectin;Galectin-related protein 2 LDDGHLNNS(1)LS(0.757)S(0.243)PVQADVYFPR 165.47 1.0997999999999999e-09 250150000.0 69742.0 78430.0 69907.0 70580.0 61944.0 61825.0 56156.0 61032.0 94060.0 64912.0 True False 65873.27223276973 74662.10507416989 74413.31707515479 77287.90197934923 66818.64038685178 61439.127242180686 61832.79650974535 60820.29423697591 76981.0750596424 64336.93018077185 1.0238796294395942 1.1604859738316187 1.1566190190621564 1.2012991879187918 1.0385736496768947 0.9549589492310402 0.9610778185407592 0.9453403211201559 1.1965301241968407 1.0 15.973359479378537 -5.920967217138266 6.262937086523731 1.0041167205059276 1.138163956663062 0.3549590838764163 0.07918945190541285 0.22088115388646426 13.832159858505799 0.02478318554787442 0.02816250450628674 1.199589851166075e-06 5.920967217138266 0.13404723615713432 LDDGHLNNS(ph)LSS(ph)PVQADVYFPR ddPTM_KYSE-520_SHP099_60min_R1 2 LDDGHLNNSLSSPVQADVYFPR 22 0 F8WF17;B9A055;U3KQ88;Q3ZCW2 F8WF17 LGALSL Galectin;Galectin-related protein 2 LDDGHLNNS(1)LS(0.113)S(0.887)PVQADVYFPR;LDDGHLNNS(0.898)LS(0.322)S(0.78)PVQADVYFPR 204.05 1.7277e-14 310040000.0 208117.0 222018.0 203594.0 180228.0 186981.0 185967.0 165262.0 170893.0 247488.0 197997.0 True False 196572.335139046 211351.92202418766 216717.9950019177 197356.81493247594 201695.3409236401 184806.31097204384 181968.29576169135 170300.21206972603 202550.41786477558 196242.90061933486 1.001678707961773 1.0769914292805973 1.1043354654765307 1.0056762018377512 1.0277841404050672 0.9417222757552115 0.9272605285969917 0.867803174190074 1.0321413779837867 1.0 17.582280937732587 -6.037890211123376 1.8425618987415788 0.9430871872427561 1.0567145946038328 0.4344432733086716 0.0503333543571587 0.2907202068727641 1.981507037800437 0.018951980636706844 0.020308449269938834 9.164521383197197e-07 6.037890211123376 0.11362740736107668 LDDGHLNNSLS(ph)SPVQADVYFPR ddPTM_KYSE-520_SHP099_60min_R1 2 LDDGHLNNSLSSPVQADVYFPR 22 0 F8WF17;B9A055;U3KQ88;Q3ZCW2 F8WF17 LGALSL Galectin;Galectin-related protein 1 LDDGHLNNSLS(0.679)S(0.32)PVQADVYFPR;LDDGHLNNSLS(0.739)S(0.261)PVQADVYFPR 209.4 1.7626999999999999e-19 3704740000.0 523996.0 543273.0 509434.0 766736.0 652377.0 684197.0 640843.0 650977.0 904810.0 678171.0 True False 494928.8973198712 517173.34961060225 542272.9307632196 839606.3589124166 703715.3583826248 679926.6727330096 705625.6644649679 648718.9127261743 740519.3124039455 672162.9325490539 0.7363228070952152 0.7694166467188509 0.8067581601186331 1.2491113660914988 1.0469416332047858 1.0115503843011888 1.049783661513456 0.965121522345821 1.1016961461942905 1.0 19.358451459656116 -5.106210206234809 7.002248799895975 1.055685034811528 0.7613968897177547 0.7679705533917573 0.07329587206412011 0.11554279444713722 6.622742595013379 0.02004707857837012 0.03508006794133388 7.830505406724072e-06 5.106210206234809 -0.29428814509377343 LDDGHLNNSLSS(ph)PVQADVYFPR ddPTM_KYSE-520_SHP099_60min_R1 3 LDDGHLNNSLSSPVQADVYFPR 22 0 F8WF17;B9A055;U3KQ88;Q3ZCW2 F8WF17 LGALSL Galectin;Galectin-related protein 1 LDDGHLNNSLS(0.282)S(0.718)PVQADVYFPR;LDDGHLNNSLS(0.118)S(0.882)PVQADVYFPR;LDDGHLNNSLS(0.171)S(0.829)PVQADVYFPR 200.13 3.5724000000000004e-14 4345000000.0 869170.0 863570.0 816160.0 1065404.0 795500.0 1067170.0 862270.0 897345.0 1131770.0 944200.0 True False 820955.4074525621 822082.8009550036 868770.979502172 1166659.6758346085 858101.3242241484 1060509.396183388 949436.6665442357 894232.3196368972 926269.0975999514 935835.1225764847 0.8772436379523322 0.878448330397875 0.9283376510921328 1.2466508765161877 0.9169364383991869 1.1332224775488846 1.0145341242699932 0.9555447301175776 0.9897780872444746 1.0 19.835894849550982 -5.015744276203524 24.903244178183794 1.037124097592508 0.8842326838597587 0.3590978837035419 0.08857149205966626 679.7401892475912 1075171.7113276843 0.02318825444872835 0.041814062962720666 9.643967181416853e-06 5.015744276203524 -0.15289141373274928 LDDIEEFENIRK ddPTM_KYSE-520_SHP099_60min_R1 3 LDDIEEFENIRK 12 1 Q8NHZ8 Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 0 ;; 198.49 1.0875e-07 449170000.0 509370.0 519640.0 387460.0 337651.0 490400.0 495590.0 358951.0 383517.0 446320.0 424920.0 False True 481114.23069607967 494675.71440445766 412436.29155791964 369741.2495215255 528991.6900056853 492496.8389802242 395237.2701041673 382186.669040541 365279.53881160525 421155.5393827574 1.1423670964917079 1.1745677502650231 0.979296846391676 0.8779208984486248 1.2560482779853064 1.1693941855828944 0.9384591514180824 0.9074715474493606 0.8673269247436621 1.0 18.683993616171698 -6.849608405498862 6.868969660461573 0.9178726032728025 1.0945409843099032 0.38958677673177045 0.10496430806752344 0.25512814620157015 16.61320381710153 0.047821472709269425 0.03219185825134112 1.4138117753845323e-07 6.849608405498862 0.1766683810371007 LDDLFLK ddPTM_KYSE-520_SHP099_60min_R1 1 LDDLFLK 7 0 P42704 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial 0 91.626 0.053751 150830000.0 373170.0 403770.0 271270.0 295810.0 405130.0 448660.0 330330.0 398790.0 422410.0 392060.0 False True 352469.516204048 384372.28312887374 288756.49824734614 323923.6934614803 437011.4261256185 445859.74651802325 363722.9801101249 397406.69056828547 345710.99208955496 388586.6534180648 0.9070551268389555 0.9891546190479759 0.7430942254640037 0.8335944907325054 1.1246176941014374 1.1473882146907928 0.9360151124871753 1.0226977356855629 0.8896625477191012 1.0 18.567876824721267 -5.745432946976481 24.99336350245992 1.0233622593824476 0.8679245573189519 0.394923826240946 0.09201935222091359 266.8021332881901 416598.3620420631 0.028938999726896095 0.037239643492813466 1.797078519218732e-06 5.745432946976481 -0.15543770206349572 LDDLVRPYVHK ddPTM_KYSE-520_SHP099_60min_R1 2 LDDLVRPYVHK 11 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 0 ; 167.2 1.5204e-05 1495100000.0 2592900.0 2120300.0 1418510.0 1280900.0 2626300.0 2193700.0 1546690.0 1759730.0 1549210.0 1561980.0 False True 2449066.6681819996 2018437.6053648132 1509949.4242962464 1402636.3508833726 2832974.8683970883 2180008.304588303 1703044.519439741 1753625.9073540706 1267912.5164060027 1548142.0724020526 1.5819392236928864 1.303780603438458 0.9753300108648636 0.9060126818380967 1.8299191778965906 1.408144861799321 1.1000569972220613 1.1327293138110994 0.81898976780519 1.0 20.562106442450375 -7.24632340208164 1.9406685826596766 0.9381287075572231 1.3125992463884657 0.27101573620730346 0.26080021045412477 0.5545166014193942 3.8954156938547806 0.20241849336096274 0.08298373228184906 5.6712213449999525e-08 7.24632340208164 0.3744705388312426 LDEDEDEDDADLSKYNLDAS(ph)EEEDSNK ddPTM_KYSE-520_SHP099_60min_R1 2 LDEDEDEDDADLSKYNLDASEEEDSNK 27 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 LDEDEDEDDADLSKYNLDAS(1)EEEDSNK;LDEDEDEDDADLSKYNLDAS(1)EEEDSNK 380.94 8.7296e-109 1906620000.0 2810400.0 2505030.0 2506500.0 2462070.0 2549800.0 2447670.0 2452740.0 2720800.0 3298000.0 2616500.0 True False 2654501.5096064983 2384684.598673313 2668073.000541796 2696064.3925516633 2750454.7536225445 2432393.1836129166 2700686.895635599 2711362.179839494 2699166.3358143824 2593319.8456061953 1.0235920239857654 0.9195489722232418 1.028825273929189 1.0396189259568371 1.0605921819796271 0.9379456944865736 1.0414013914293345 1.045517846336346 1.0408150542585484 1.0 21.306368720449065 -4.81306925023104 24.998883879057637 1.0253295399867817 0.9715700292260001 0.21691775884006503 0.04006936804391704 127.10172739996618 61541.350986649886 0.01030998228695503 0.021461989876302514 1.5379093941008597e-05 4.81306925023104 -0.05375951076078156 LDEDEDEDDADLSKYNLDAS(ph)EEEDSNKK ddPTM_KYSE-520_SHP099_60min_R1 1 LDEDEDEDDADLSKYNLDASEEEDSNKK 28 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 LDEDEDEDDADLSKY(0.001)NLDAS(0.978)EEEDS(0.021)NKK 63.536 0.019982 756230000.0 1407900.0 1427500.0 1316800.0 1371300.0 1446400.0 1346300.0 1168900.0 1387500.0 1716500.0 1317900.0 True False 1329800.98042093 1358920.7572788165 1401683.0349544927 1501627.9397036221 1560223.451109752 1337897.2423153727 1287063.8193646497 1382687.086344936 1404826.8694437183 1306224.4313106854 1.018049386112452 1.0403424746199663 1.0730797873287539 1.1495941307703654 1.1944528166145234 1.0242476026672587 0.9853313018140308 1.0585371496669427 1.0754865976852797 1.0 20.316971366760907 LDEDEDEDDADLSKYNLDAS(ph)EEEDSNKKK ddPTM_KYSE-520_SHP099_60min_R1 3 LDEDEDEDDADLSKYNLDASEEEDSNKKK 29 3 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 LDEDEDEDDADLSKYNLDAS(1)EEEDSNKKK;LDEDEDEDDADLSKYNLDAS(1)EEEDSNKKK;LDEDEDEDDADLS(0.023)KY(0.021)NLDAS(0.904)EEEDS(0.052)NKKK 281.13 8.6052e-43 3107770000.0 837466.0 893188.0 882617.0 728230.0 731021.0 739393.0 645886.0 613044.0 1124434.0 700123.0 True False 791010.0915329184 850277.9077774785 939511.9040571308 797440.7602496659 788548.1937594734 734778.1740230933 711178.4601199053 610917.4934495447 920265.1302744412 693920.4549074513 1.1399146486298866 1.2253247497811268 1.3539187343633416 1.1491818040671842 1.1363668388542354 1.0588795427872078 1.0248702932597018 0.8803854809713358 1.3261824518448266 1.0 19.404410768525928 -5.852023005965434 1.8757023145964635 1.0493276738069282 1.2361220866667848 0.2987300834936084 0.11649935964732278 0.3983862771330843 2.8823154286128583 0.04083369512176329 0.050046065035735526 1.4059730432757297e-06 5.852023005965434 0.18679441285985665 LDEIYVAGLVAHSDLDER ddPTM_KYSE-520_SHP099_60min_R1 7 LDEIYVAGLVAHSDLDER 18 0 O60506-2;O60506;O60506-4;O60506-3;F6UXX1 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 ;;;;;; 257.02 1.7765e-29 620971000.0 1049613.0 663436.0 454485.0 777249.0 815245.0 646246.0 624808.0 753722.0 555300.0 512719.0 False True 991388.8745383578 631563.5387222612 483781.83030171134 851118.5112715667 879400.1433904659 642212.5390012178 687969.690178449 751107.5143020366 454471.5179738405 508176.7085493453 1.950874288135721 1.2428030015880485 0.9519952846377547 1.674847542110287 1.7305006872527173 1.2637583112270034 1.35380012228885 1.478043959248286 0.8943178825947906 1.0 18.954970727769048 -7.7604929765273605 24.99985358863913 0.9471587479329782 1.438585850029253 0.3626278688520279 0.2689738441669299 27.8681843358854 736328.2077991555 0.21247856679308313 0.06967813101738975 1.735829334725379e-08 7.7604929765273605 0.4914271020962748 LDELYGTWR ddPTM_KYSE-520_SHP099_60min_R1 4 LDELYGTWR 9 0 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 ;;; 184.38 4.964e-05 1608360000.0 1214180.0 1052780.0 703845.0 803433.0 1258380.0 1263300.0 996930.0 1043833.0 896920.0 1015800.0 False True 1146827.014992178 1002202.8685450037 749215.974891817 879791.0307590613 1357407.3467972141 1255415.2761026572 1097709.4134991881 1040212.1869554546 734061.9375132316 1006800.8022804406 1.1390803547182053 0.9954331246806495 0.7441551230340853 0.8738481621849153 1.3482382450655948 1.2469351169159737 1.090294535932864 1.0331856953225862 0.7291034491138213 1.0 19.941346840563785 -3.302523299079029 3.0111747694492648 1.0176315775295899 16.824333435589082 0.03997604330576077 0.1863208368394252 1594.0226712947465 116.07153208662054 0.05259255796580853 170428.64374849544 0.0004982837232724364 3.302523299079029 15.806701858059492 LDFIES(ph)DSPCSSEALSK ddPTM_KYSE-520_SHP099_60min_R1 1 LDFIESDSPCSSEALSK 17 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 LDFIES(0.352)DS(0.305)PCS(0.305)S(0.039)EALSK 51.888000000000005 0.049539 203700000.0 131960.0 128850.0 131800.0 99442.0 101770.0 100270.0 109710.0 91619.0 124460.0 109070.0 True False 124639.91574426174 122659.85259220697 140296.038887456 108892.93778167262 109778.72000790894 99644.17773673202 120800.55746641786 91301.19507303534 101861.20138127894 108103.72465517586 1.1529659698759893 1.1346496430484847 1.297790981161525 1.0073005174337346 1.0154943352606574 0.9217460180449129 1.1174504657609323 0.8445702991665048 0.9422543183057843 1.0 16.72205670564054 -5.398324217574924 5.870994347704737 0.9739215038233459 1.1881184419912385 0.6240463885940133 0.0773295137318575 0.15209790250542707 6.642604469547798 0.02189508780478431 0.03265275552221213 3.996462870064067e-06 5.398324217574924 0.21419693816789265 LDFIESDS(ph)PCSSEALSK ddPTM_KYSE-520_SHP099_60min_R1 2 LDFIESDSPCSSEALSK 17 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 LDFIES(0.012)DS(0.962)PCS(0.02)S(0.005)EALSK;LDFIESDS(0.937)PCS(0.063)S(0.001)EALSK 278.19 2.8670999999999996e-30 2097330000.0 2638900.0 2574900.0 1931550.0 2212380.0 2291150.0 2629130.0 2158730.0 2620480.0 3079500.0 2509390.0 True False 2492514.956483273 2451197.938996306 2056060.8035892702 2422643.9300237014 2471450.4701397326 2612720.624443742 2376955.4955745162 2611390.16650463 2520340.4278776194 2487158.756875881 1.0021535415029637 0.9855414063215067 0.826670512248236 0.9740608327981376 0.9936842444445003 1.0504840582535147 0.9556911029516302 1.0499491274070483 1.0133411954142477 1.0 21.246067167931496 -5.674412669315359 3.5841524232090287 1.0128746094355707 0.9377711423311542 0.28642536079510295 0.050649772887306675 0.295356655877151 7.412562911540665 0.015889258601953705 0.02065474956390008 2.1163492113572144e-06 5.674412669315359 -0.07510346710441651 LDFIESDS(ph)PCSSEALSKK ddPTM_KYSE-520_SHP099_60min_R1 1 LDFIESDSPCSSEALSKK 18 1 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 LDFIES(0.013)DS(0.982)PCS(0.004)S(0.001)EALS(0.001)KK 81.14399999999999 0.0034951 495820000.0 304560.0 418720.0 336580.0 230850.0 266010.0 256300.0 199960.0 204430.0 426320.0 243740.0 True False 287665.44967469224 398604.06268846605 358276.4853470409 252789.9145924166 286943.4736101394 254700.33663034244 220173.90822153797 203720.88004432077 348911.03465263406 241580.6532268503 1.1907636055796536 1.6499833797293644 1.4830512317996356 1.0463996649393963 1.1877750547378985 1.0543076741794073 0.9113888272120415 0.843283091270648 1.444283844720785 1.0 17.88214539676833 -5.262004034695923 24.985501432651393 1.0607945371414833 1.4621378229366349 0.45431583766771033 0.18604675799480386 41.76355271321805 1848036.838180145 0.050790023466216694 0.08079776784309572 5.470108810130932e-06 5.262004034695923 0.40134328579515155 LDFIESDSPCS(ph)SEALSK ddPTM_KYSE-520_SHP099_60min_R1 1 LDFIESDSPCSSEALSK 17 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 LDFIESDS(0.277)PCS(0.693)S(0.03)EALSK 229.68 7.810200000000001e-19 649600000.0 1050300.0 925840.0 813240.0 835740.0 924700.0 967770.0 836830.0 1040700.0 1260900.0 1022100.0 True False 992037.7652788588 881361.2566858279 865662.7516300068 915168.4783256069 997468.6291767063 961729.7884539465 921424.9430737618 1037090.054601206 1031952.3447023507 1013044.9891817664 0.979263286302936 0.8700119600785952 0.8545156048096149 0.9033838458297749 0.9846242169188941 0.9493455855605514 0.9095597460266737 1.0237354369018308 1.018663885338257 1.0 19.95026681476449 -6.814021481754305 0.7259740293186963 1.0186878804961306 0.9011906765734258 0.4544372469993774 0.043085377361930244 0.6446519797875148 0.6655036510317749 0.03910999132501152 0.024047730662174603 1.5345410770462864e-07 6.814021481754305 -0.1174972039227048 LDFIESDSPCSS(ph)EALSK ddPTM_KYSE-520_SHP099_60min_R1 1 LDFIESDSPCSSEALSK 17 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-4 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 LDFIES(0.046)DS(0.28)PCS(0.28)S(0.395)EALSK 68.173 0.013498 150520000.0 125960.0 122870.0 114440.0 88138.0 102700.0 108590.0 96418.0 111120.0 121990.0 99995.0 True False 118972.74770496515 116967.14076837 121816.98551047395 96514.60902034398 110781.90571693273 107912.24953058468 106164.87238899898 110734.550655603 99839.69111764607 99109.1220949328 1.200421769360501 1.1801854188187813 1.2291198119360816 0.9738216521370895 1.1177770862587102 1.0888225750523721 1.0711917343724198 1.1172992789658116 1.0073713600450773 1.0 16.596730230053602 -1.0000000000000406 0.2293851436362633 1.0195722800433076 2.164500351004242 0.5011900765641576 0.05876775202372335 44.236972108730875 0.5779137108639819 0.08675526886862575 19.00717844256633 0.09999999999999064 1.0000000000000406 1.1449280709609344 LDFLPEMMVDHCS(ph)LNS(ph)SPVSK ddPTM_KYSE-520_SHP099_60min_R1 1 LDFLPEMMVDHCSLNSSPVSK 21 0 F5H0D8;E9PKU1;G5EA30;Q92879-4;F5H3J7 F5H0D8 CELF1 CUGBP Elav-like family member 1 2 LDFLPEMMVDHCS(1)LNS(0.662)S(0.338)PVSK 162.47 3.4481999999999997e-09 191610000.0 260730.0 224850.0 185900.0 209750.0 185530.0 198500.0 190130.0 216740.0 282370.0 214630.0 True False 246266.78714763073 214047.86849326902 197883.41145051652 229684.57693636278 200130.1554787007 197261.08787016378 209350.19588998292 215988.17952749654 231098.72596843744 212728.5451796135 1.1576574593677582 1.0062019101035151 0.9302156007480672 1.0797073648129016 0.940777154799439 0.9272901655187364 0.9841189658549203 1.0153229757911937 1.0863550341742498 1.0 17.698654110113978 -4.268399403020621 4.9493855896643435 0.9927300234347595 1.1652628061991528 0.4556930745644222 0.052804223851631686 0.14704558597319062 11.057998979093444 0.013443872138299071 0.08641028789749186 5.390146845593735e-05 4.268399403020621 0.17253278276439332 LDFLPEMMVDHCS(ph)LNSS(ph)PVSK ddPTM_KYSE-520_SHP099_60min_R1 1 LDFLPEMMVDHCSLNSSPVSK 21 0 F5H0D8;E9PKU1;G5EA30;Q92879-4;F5H3J7 F5H0D8 CELF1 CUGBP Elav-like family member 1 2 LDFLPEMMVDHCS(0.927)LNS(0.377)S(0.695)PVS(0.001)K 101.73 0.00065257 81364000.0 96666.0 89120.0 89331.0 102550.0 90250.0 90959.0 91295.0 115590.0 119340.0 96115.0 True False 91303.74428110656 84838.54142815285 95089.41919465366 112296.32116721828 97352.16154774291 90391.29114147212 100523.98955333706 115189.04526890894 97670.8643165822 95263.49587633836 0.958433694262365 0.8905671647645793 0.9981726822002137 1.1787969792016686 1.0219251419674527 0.9488554908672377 1.0552204559428235 1.2091624835859054 1.0252706287765132 1.0 16.53963587167901 -4.999079538260245 10.006442231570743 1.0665395381302887 0.9292657942441018 0.34787423369730286 0.07575664378213966 0.10187153274178241 224.87044811932986 0.020841499825707724 0.0411536208253207 1.0021216890843331e-05 4.999079538260245 -0.13727374388618685 LDFLPEMMVDHCSLNS(ph)S(ph)PVSK ddPTM_KYSE-520_SHP099_60min_R1 1 LDFLPEMMVDHCSLNSSPVSK 21 0 F5H0D8;E9PKU1;G5EA30;Q92879-4;F5H3J7 F5H0D8 CELF1 CUGBP Elav-like family member 1 2 LDFLPEMMVDHCS(0.217)LNS(0.83)S(0.952)PVS(0.001)K 100.08 0.00076871 240310000.0 168230.0 151330.0 124980.0 176760.0 141420.0 140560.0 140200.0 169510.0 188430.0 166810.0 True False 158897.94654180945 144059.87964903898 133036.41077507025 193559.2172551682 152548.9494302691 139682.71290191528 154372.78422014214 168922.00937393133 154215.86193374882 165332.19317621624 0.9610829173024459 0.8713359260618737 0.8046612593669272 1.170729145586708 0.9226814602748156 0.8448609446137151 0.933712795157848 1.0217127477035821 0.9327636618803012 1.0 17.3350081453075 LDFLPEMMVDHCSLNS(ph)SPVSK ddPTM_KYSE-520_SHP099_60min_R1 1 LDFLPEMMVDHCSLNSSPVSK 21 0 F5H0D8;E9PKU1;G5EA30;Q92879-4;F5H3J7 F5H0D8 CELF1 CUGBP Elav-like family member 1 1 LDFLPEMMVDHCS(0.002)LNS(0.552)S(0.439)PVS(0.007)K 122.73 4.921e-05 202110000.0 122950.0 137480.0 181690.0 95837.0 91900.0 143330.0 93543.0 83396.0 144200.0 143810.0 True False 116129.71840525145 130875.25443831275 193402.02811427857 104945.31966555539 99132.00716052714 142435.42430443587 102999.2393317028 83106.7187407728 118016.91498618356 142535.9552824869 0.814739818981801 0.9181911622154268 1.3568648537204668 0.7362726089537761 0.6954877242311316 0.9992946974126509 0.7226193498164889 0.5830579279176723 0.8279799630366252 1.0 17.12096636539602 LDFLPEMMVDHCSLNSS(ph)PVSK ddPTM_KYSE-520_SHP099_60min_R1 1 LDFLPEMMVDHCSLNSSPVSK 21 0 F5H0D8;E9PKU1;G5EA30;Q92879-4;F5H3J7 F5H0D8 CELF1 CUGBP Elav-like family member 1 1 LDFLPEMMVDHCS(0.106)LNS(0.35)S(0.542)PVS(0.002)K 101.04 0.00070155 84393000.0 60294.0 57180.0 92479.0 50773.0 43497.0 66291.0 46361.0 51830.0 55518.0 73001.0 True False 56949.37162689084 54432.98697107022 98440.34431163165 55598.45065454092 46919.9664359243 65877.25327960207 51047.62231975756 51650.21382721297 45437.3306948887 72354.26793391856 0.7870907031897957 0.7523120408153958 1.3605326558142723 0.7684197800925746 0.6484754496967131 0.9104819267851348 0.7055233060526513 0.7138516538428018 0.6279841119584928 1.0 16.14279049852477 -5.478674413503686 24.999813533704963 0.7529860050946684 0.9650892259653454 0.18949083541999634 0.18694547991985067 708.6045199681087 400751.55083073524 0.05223731091798188 0.07747533216188217 3.3214336900353955e-06 5.478674413503686 0.212103220870677 LDFNLIR ddPTM_KYSE-520_SHP099_60min_R1 1 LDFNLIR 7 0 P31939-2;P31939;C9JLK0 P31939-2 ATIC Bifunctional purine biosynthesis protein PURH;Phosphoribosylaminoimidazolecarboxamide formyltransferase;IMP cyclohydrolase 0 125.01 0.017335 208450000.0 266550.0 296310.0 229780.0 182120.0 277460.0 300130.0 226260.0 213240.0 256260.0 248310.0 False True 251763.94014574823 282074.82282962266 244591.9864609993 199428.6300436255 299294.52346855117 298256.7773424296 249132.5688848026 212500.32021059003 209729.6437889003 246110.16658225667 1.022972531537424 1.1461323469355567 0.9938312986320703 0.8103225998872788 1.2160997963833358 1.2118832045190793 1.0122806885409008 0.863435766029465 0.8521778953767967 1.0 17.90894472985521 -7.114009004875683 4.854662668612822 0.8955014785238868 1.065732704741563 0.27343925870292385 0.11702103462438135 0.31298699518749423 11.173631038398517 0.06079902697880277 0.03444720381045413 7.691144929225852e-08 7.114009004875683 0.17023122621767617 LDGLVET(ph)PTGYIESLPR ddPTM_KYSE-520_SHP099_60min_R1 9 LDGLVETPTGYIESLPR 17 0 P55209;P55209-2;H0YIV4;F5H4R6;F8VY35;F8W118;F8VV59;F8W0J6;F8W020;H0YHC3;F8VRJ2;B7Z9C2;F8VXI6;F8VUX1;P55209-3 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 LDGLVET(0.997)PT(0.003)GYIESLPR;LDGLVET(0.996)PT(0.004)GYIESLPR;LDGLVET(0.986)PT(0.014)GYIESLPR;LDGLVET(0.988)PT(0.012)GYIESLPR;LDGLVET(0.921)PT(0.079)GYIESLPR;LDGLVET(0.92)PT(0.08)GYIESLPR;LDGLVET(0.977)PT(0.023)GYIESLPR;LDGLVET(0.913)PT(0.087)GYIESLPR;LDGLVET(0.991)PT(0.009)GYIESLPR 183.7 1.7525e-11 4914246000.0 1330274.0 1727645.0 1242728.0 1084986.0 1088801.0 1434132.0 1022508.0 1403404.0 1639440.0 1570830.0 True False 1256481.0493845264 1644646.340951986 1322836.2353151038 1188102.743227065 1174483.4442697386 1425181.0502237473 1125873.0873564132 1398535.9190809566 1341759.0229192034 1556913.668287248 0.8070332189753169 1.05635037732134 0.8496529141338637 0.7631140810357778 0.7543664547320607 0.9153886173994356 0.7231441988655544 0.8982745463462198 0.8618069519521048 1.0 20.5702575177315 -10.29631867308087 13.57904489498022 0.9999992280644356 0.8484613315606372 0.19920798573432197 0.09160604239591044 1.3119641554186713e-10 0.0 0.09065334456933716 0.021986665586758252 5.05453638227173e-11 10.29631867308087 -0.15153789650379845 LDGLVETPT(ph)GYIESLPR ddPTM_KYSE-520_SHP099_60min_R1 1 LDGLVETPTGYIESLPR 17 0 P55209;P55209-2;H0YIV4;F5H4R6;F8VY35;F8W118;F8VV59;F8W0J6;F8W020;H0YHC3;F8VRJ2;B7Z9C2;F8VXI6;F8VUX1;P55209-3 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 LDGLVET(0.074)PT(0.52)GYIES(0.406)LPR 120.59 0.00023067 17155000.0 75067.0 83317.0 68527.0 61767.0 67227.0 73112.0 59030.0 77984.0 83752.0 88307.0 True False 70902.88386764555 79314.32625863345 72944.36006707676 67637.3171090744 72517.38243069373 72655.6808884807 64997.32847728236 77713.49170560237 68544.74801610857 87524.6686818064 0.8100902858074344 0.9061939616930006 0.8334148665248198 0.7727800416470934 0.828536497456834 0.8301166057836618 0.7426172467282157 0.8879038661446146 0.7831477576373488 1.0 16.417402074997636 -10.118464084504982 4.511923997102783 1.0000163864580947 0.8231166610198489 0.5645814469994074 0.04697315975553894 8.65468449315478e-06 1.6910012153730872e-06 0.04471110326693827 0.010842893704807953 7.612650918712197e-11 10.118464084504982 -0.17689972543824573 LDGLVETPTGYIES(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 5 LDGLVETPTGYIESLPR 17 0 P55209;P55209-2;H0YIV4;F5H4R6;F8VY35;F8W118;F8VV59;F8W0J6;F8W020;H0YHC3;F8VRJ2;B7Z9C2;F8VXI6;F8VUX1;P55209-3 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 LDGLVETPTGYIES(1)LPR;LDGLVETPTGYIES(1)LPR;LDGLVETPTGYIES(1)LPR;LDGLVET(0.001)PT(0.175)GY(0.001)IES(0.823)LPR;LDGLVETPTGYIES(1)LPR 262.74 1.675e-29 1166751000.0 605036.0 646803.0 563818.0 409839.0 468121.0 613085.0 485789.0 619777.0 684217.0 701032.0 True False 571473.4469706367 615729.6130089031 600162.6104206968 448789.9753374118 504959.45945585484 609258.5091026658 534897.292963756 617627.1382440393 559980.4405069461 694821.4018746429 0.8224753086603107 0.8861696132958073 0.8637652910538525 0.6459069541130525 0.7267471296846405 0.8768562791227694 0.7698342214568977 0.8889005672215451 0.805934358089873 1.0 19.40628266703273 -8.789557997082355 0.670316787904907 1.0057460304102994 0.7997058803627553 0.38042750695823024 0.07369187586485673 3.4911956870683194 2.088236841487303 0.13342724213422588 0.030309542579095045 1.623461533729236e-09 8.789557997082355 -0.20604015004754417 LDGSLETTNEILDS(ph)ASHDCPLVTQTYGAAAGK ddPTM_KYSE-520_SHP099_60min_R1 1 LDGSLETTNEILDSASHDCPLVTQTYGAAAGK 32 0 Q9Y4P8-4;Q9Y4P8;Q9Y4P8-3;Q9Y4P8-2;Q9Y4P8-5;Q9Y4P8-6 Q9Y4P8-4 WIPI2 WD repeat domain phosphoinositide-interacting protein 2 1 LDGSLET(0.006)T(0.006)NEILDS(0.956)AS(0.032)HDCPLVTQTYGAAAGK 89.634 1.9282e-05 0.0 31946.0 30150.0 22172.0 22064.0 18373.0 27937.0 14301.0 34050.0 25251.0 32198.0 True False 30173.89169722783 28701.548743927364 23601.242596454314 24160.95592621652 19818.85057192996 27762.634820296014 15746.68464430993 33931.88849732973 20666.05492590931 31912.750769664934 0.9455120906064294 0.8993755803467115 0.7395552569817571 0.7570941189182294 0.6210323489496562 0.8699543019865945 0.49342924895330986 1.0632705636138429 0.6475798678424702 1.0 14.961845348890987 -10.220294264196081 20.509785794114528 0.9999999979898044 0.781003575127905 0.14279011428308586 0.1603256576474894 0.0 0.0 0.14753164202805774 0.035781679011911524 6.021514490550408e-11 10.220294264196081 -0.21899642286189946 LDHEGVT(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 LDHEGVTSPK 10 0 H9KVB4;O15417;H7BXS9;F8WBW8;Q9P281 H9KVB4 TNRC18;BAHCC1 Trinucleotide repeat-containing gene 18 protein;BAH and coiled-coil domain-containing protein 1 1 LDHEGVT(0.903)S(0.097)PK 109.72 0.0032541 345440000.0 1499400.0 1342800.0 1267900.0 1195600.0 1469400.0 1249800.0 1219500.0 1403100.0 1692900.0 1296100.0 True False 1416225.2930202046 1278289.8724161095 1349630.8627117279 1309229.4645297527 1585033.4202576538 1241999.534610228 1342778.9611730608 1398232.9735860026 1385512.0345361338 1284617.5623505407 1.1024489579831476 0.9950742616947779 1.0506090701751178 1.0191589332892026 1.2338562594126647 0.9668243460237831 1.0452752636481932 1.0884429845623262 1.0785404739453979 1.0 20.292907494486276 -3.836515907344938 18.104635851826174 1.056912749453865 42.61665677986404 0.03993708840151733 0.07039205782624061 1171.3172278040763 129681.29139114886 0.016554127515683047 523.0825704332377 0.0001457082333718942 3.836515907344938 41.55974403041017 LDHHPEWFNVYNK ddPTM_KYSE-520_SHP099_60min_R1 1 LDHHPEWFNVYNK 13 0 P61457 P61457 PCBD1 Pterin-4-alpha-carbinolamine dehydratase 0 75.08800000000001 0.018501 472240000.0 630830.0 480790.0 309330.0 431120.0 597960.0 576850.0 532100.0 716800.0 381760.0 460650.0 False True 595836.6023715722 457692.1267194968 329269.9067454997 472093.5151790454 645016.0500730005 573249.6651783566 585889.8607955598 714313.5881023777 312442.00738644594 456568.99938027654 1.3050307909217016 1.002459929037549 0.7211832323097579 1.0340025621972604 1.4127460492247883 1.2555597641461782 1.283244945650749 1.5645249438134226 0.6843259349858155 1.0 18.800473379644018 -5.590141968118059 9.588705142421956 1.2346756203344147 0.9870994310020967 0.09822948317546998 0.25948063062989823 0.6308154251233926 84.5978599302731 0.07509433636348516 0.09698819755390357 2.5695556739727186e-06 5.590141968118059 -0.24757618933231795 LDHINFPVFEPSTPDPAPAKNES(ph)SPAPPDSDADK ddPTM_KYSE-520_SHP099_60min_R1 1 LDHINFPVFEPSTPDPAPAKNESSPAPPDSDADK 34 1 Q8ND04;Q8ND04-2;J3KTD7 Q8ND04 SMG8 Protein SMG8 1 LDHINFPVFEPST(0.002)PDPAPAKNES(0.842)S(0.153)PAPPDS(0.003)DADK 83.05799999999999 0.0028046 137690000.0 36744.0 41416.0 49116.0 38398.0 39286.0 43530.0 27389.0 28378.0 53456.0 41428.0 True False 34705.73707265197 39426.31319331659 52282.0959483786 42047.334375220344 42377.58469323683 43258.31312336634 30157.74741088067 28279.563341475005 43749.737916098704 41060.98015049629 0.8452242724223546 0.9601892855166065 1.2732792972002809 1.0240216921541785 1.0320646155526472 1.053513894817328 0.7344624336863562 0.6887210981770293 1.0654820648641996 1.0 15.3254804454125 -6.742077087102123 24.884799647591993 0.8462264889142853 1.0388379629880657 0.21738877272131985 0.1442684603941143 300.05573656041133 385637.46624173736 0.05612186788180653 0.0434039368659848 1.8110186089880355e-07 6.742077087102123 0.19261147407378043 LDHKFDLMYAK ddPTM_KYSE-520_SHP099_60min_R1 9 LDHKFDLMYAK 11 1 Q9BQE3;F5H5D3;Q9NY65;C9J2C0;Q9NY65-2;A6NHL2-2;A6NHL2;V9GZ17;P68363;P68366-2;P68366;P68363-2;Q71U36-2;Q71U36;P0DPH8;P0DPH7 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA8;TUBAL3;TUBA1B;TUBA4A;TUBA1A Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha chain-like 3;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain 0 ;;;;;;;; 185.27 9.9338e-07 32812840000.0 86901800.0 79440100.0 56779680.0 39813450.0 66816700.0 59607600.0 43654180.0 44311530.0 53693500.0 42545770.0 False True 82081183.91955657 75623678.3539789 60439789.023500144 43597308.31764973 72074794.15498137 59235566.85808339 48067170.53814004 44157823.644818895 43944113.90298647 42168847.57790816 1.9464886672065018 1.7933541630290462 1.4332805493874572 1.0338747872372478 1.7091952541937772 1.4047233979691756 1.139873942472214 1.047166953359018 1.0420990002583888 1.0 25.329674259308426 -1.0000000000035008 0.24635632820613482 0.9860172434524141 7.030847817848208 0.6853962211843374 0.18972547589118302 31.62672368942901 0.4273068517067428 0.2714634942388206 78.86067313383661 0.09999999999919393 1.0000000000035008 6.044830574395794 LDHLAEK ddPTM_KYSE-520_SHP099_60min_R1 8 LDHLAEK 7 0 P12814-3;P12814;P12814-2;P12814-4;H9KV75;O43707;O43707-2 P12814-3;O43707 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 0 ;;;;;;; 137.18 0.0029919 11676770000.0 18030340.0 17030430.0 11663330.0 10566040.0 16381730.0 16329060.0 12157870.0 15353950.0 14597390.0 14193420.0 False True 17030161.0976083 16212262.579603415 12415166.913787821 11570233.264804242 17670878.951706413 16227144.279582731 13386906.148976749 15300690.731088866 11946871.94625635 14067677.341113677 1.210587980137743 1.1524477130437198 0.8825313953927355 0.8224693376346857 1.2561333703654227 1.1535055777941305 0.9516074206402694 1.0876486828690355 0.8492426757145518 1.0 23.745880814742787 -4.583400282181478 8.427504118943984 1.0101403961818711 1.1962907705562462 0.24027749645770613 0.12969744996812246 0.35984765485117925 44.83885378833279 0.034721914678231276 0.09266047242711477 2.6097548768135426e-05 4.583400282181478 0.1861503743743751 LDHVNIVHYNGCWDGFDYDPET(ph)SDDSLESSDYDPENSK ddPTM_KYSE-520_SHP099_60min_R1 5 LDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSK 38 0 P19525-2;P19525 P19525-2 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase 1 LDHVNIVHYNGCWDGFDYDPET(0.499)S(0.499)DDS(0.003)LESSDYDPENSK;LDHVNIVHYNGCWDGFDYDPET(0.788)S(0.153)DDS(0.058)LESSDYDPENSK;LDHVNIVHY(0.008)NGCWDGFDY(0.042)DPET(0.308)S(0.308)DDS(0.308)LES(0.01)S(0.012)DY(0.003)DPENSK;LDHVNIVHYNGCWDGFDY(0.001)DPET(0.299)S(0.299)DDS(0.299)LES(0.078)S(0.018)DY(0.005)DPENSK;LDHVNIVHYNGCWDGFDYDPET(0.497)S(0.497)DDS(0.006)LESSDYDPENSK 219.92 2.3219e-22 1624720000.0 558626.0 591707.0 411121.0 480952.0 419880.0 430290.0 433819.0 439003.0 564509.0 445360.0 True False 527637.9021866772 563280.5075496859 437622.51747685805 526661.5334765082 452922.16720959893 427604.40050202876 477673.6581854332 437480.2010570706 462008.39571383904 441414.45688483684 1.195334438999436 1.276080787033768 0.9914095713250096 1.1931225297723131 1.026070080273253 0.9687140822702799 1.0821432119747183 0.991087161359573 1.0466544276196532 1.0 18.75177435492546 -4.75718902369179 0.7182111767150461 1.0173584573171512 1.295207339706671 0.4958443961422875 0.07206926941696944 1.3333804291562894 0.8165754501748396 0.03152833049721942 0.2705038217462658 1.749085245584686e-05 4.75718902369179 0.27784888238951977 LDHVNIVHYNGCWDGFDYDPETS(ph)DDSLESSDYDPENSK ddPTM_KYSE-520_SHP099_60min_R1 4 LDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSK 38 0 P19525-2;P19525 P19525-2 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase 1 LDHVNIVHYNGCWDGFDY(0.001)DPET(0.025)S(0.967)DDS(0.007)LESSDYDPENSK;LDHVNIVHYNGCWDGFDYDPET(0.113)S(0.886)DDS(0.001)LESSDYDPENSK;LDHVNIVHYNGCWDGFDYDPET(0.028)S(0.811)DDS(0.161)LESSDYDPENSK;LDHVNIVHYNGCWDGFDYDPET(0.151)S(0.849)DDSLESSDYDPENSK 285.8 2.1451999999999994e-53 3288550000.0 1199792.0 1216990.0 886634.0 921180.0 864636.0 829523.0 926130.0 944056.0 1106614.0 838733.0 True False 1133237.1460339443 1158523.973660768 943787.8463045574 1008728.6702371336 932677.9340941171 824345.6392610666 1019752.2585577756 940781.2900803273 905680.7930687988 831302.4781444004 1.3632067458327686 1.3936250692368657 1.1353122011752477 1.2134315688421582 1.1219477369729522 0.9916313988394903 1.2266921913116693 1.1316955197587057 1.0894720235772937 1.0 19.665013986712662 -4.774436115508289 8.036899949698237 1.121678020901416 1.3789924191438119 0.6782113368413643 0.07275771489804672 0.074566829911117 29.826142548858193 0.018873946002932292 0.04219437779214315 1.6809851795657576e-05 4.774436115508289 0.25731439824239577 LDHVNIVHYNGCWDGFDYDPETSDDS(ph)LESSDYDPENSK ddPTM_KYSE-520_SHP099_60min_R1 1 LDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSK 38 0 P19525-2;P19525 P19525-2 EIF2AK2 Interferon-induced, double-stranded RNA-activated protein kinase 1 LDHVNIVHYNGCWDGFDY(0.059)DPET(0.283)S(0.283)DDS(0.362)LES(0.01)S(0.003)DYDPENSK 84.36200000000001 0.0026785999999999997 103290000.0 26052.0 26020.0 25941.0 20445.0 23205.0 22932.0 26751.0 21219.0 23911.0 22640.0 True False 24606.84362662555 24769.960143183747 27613.198367067536 22388.08665298661 25031.10148161079 22788.872881806503 29455.252144600727 21145.39624155184 19569.365147258235 22439.42721365346 1.0965896496526126 1.1038588421772306 1.2305660970822843 0.9977120378261879 1.115496453776699 1.0155728426053772 1.312656150451043 0.9423322636633855 0.8720973561816715 1.0 14.453748229891508 -7.480829250867473 24.87990313749812 0.9264372779798516 1.1191268614571106 0.462482640919764 0.09189983814682257 360.2097630664842 213130.07337890594 0.04791368961831864 0.023013519174370983 3.304994561188922e-08 7.480829250867473 0.19268958347725895 LDHYAIIK ddPTM_KYSE-520_SHP099_60min_R1 1 LDHYAIIK 8 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 RPL23A 60S ribosomal protein L23a 0 144.38 0.00091105 921500000.0 2363000.0 1890800.0 1232900.0 1337100.0 2083000.0 1982500.0 1596400.0 1868200.0 1515000.0 1679200.0 False True 2231919.679476283 1799963.1298513396 1312374.7067097484 1464177.5819862245 2246920.2493512277 1970126.4821289622 1757779.691362588 1861719.650241157 1239914.1900420825 1664323.59439783 1.3410370957841375 1.0814982951092424 0.7885333784410954 0.8797433305125855 1.3500501085933274 1.1837400423574327 1.0561525999386985 1.118604372675944 0.7449958615113527 1.0 20.66650453323914 -7.744247983236117 24.987964756180105 0.8724979001266653 1.0912598787038494 0.2100897308579477 0.17575134427010772 357.80201342529404 520075.2778302712 0.12685682248094565 0.04768908651361273 1.8019885070924462e-08 7.744247983236117 0.21876197857718416 LDHYYR ddPTM_KYSE-520_SHP099_60min_R1 1 LDHYYR 6 0 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L3F2;H3BV13;H3BQ89 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 0 118.06 0.01145 0.0 277380.0 248580.0 170800.0 178760.0 264050.0 271520.0 206600.0 212650.0 187450.0 197060.0 False True 261993.1784566787 236637.8436738131 181810.0412896623 195749.29665384622 284829.23276101414 269825.3429647697 227485.1442216931 211912.3667828833 153413.80522995925 195314.2017103599 1.3413933864635201 1.2115752034495366 0.93085930105214 1.0022276667015313 1.458312965809829 1.3814937193604881 1.1647137905467875 1.0849818647449794 0.785471839152093 1.0 17.575437328895518 -7.524462366393749 3.3849088622473764 0.8946587859025485 1.208139506780897 0.38347835319649815 0.16030585791509053 0.28086311636970485 6.650318116124168 0.13017862387551474 0.04704367842029123 2.9890806532680065e-08 7.524462366393749 0.31348072087834855 LDIDS(ph)PPITAR ddPTM_KYSE-520_SHP099_60min_R1 12 LDIDSPPITAR 11 0 P14618;B4DNK4;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BN34;H3BQZ3;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 LDIDS(1)PPITAR;LDIDS(0.997)PPIT(0.003)AR;LDIDS(1)PPITAR;LDIDS(1)PPITAR;LDIDS(1)PPITAR;LDIDS(1)PPITAR;LDIDS(0.988)PPIT(0.012)AR;LDIDS(1)PPITAR;LDIDS(0.999)PPIT(0.001)AR;LDIDS(1)PPITAR;LDIDS(1)PPITAR;LDIDS(1)PPITAR 169.57 1.3252000000000001e-05 93603970000.0 34109300.0 31390540.0 28543420.0 24440180.0 27018900.0 28601970.0 25557330.0 29382230.0 36075250.0 29383420.0 True False 32217189.13379624 29882491.340238836 30383374.524286762 26762967.358991954 29145133.713488195 28423454.495867897 28140914.331904132 29280309.90199403 29524893.983046655 29123105.75875486 1.1062415320904175 1.0260750205618332 1.043273845034644 0.9189599344481516 1.0007563738193244 0.9759760765667433 0.9662744957565019 1.005397918221408 1.013796201120171 1.0 24.795660880456627 -4.346702542673685 1.3407540711595562 0.9846206427429064 1.140598313607542 0.5944748723371945 0.02988241928854676 0.7708857531016817 1.3895281692876178 0.008771494240718266 0.15720330872597693 4.5008802399741086e-05 4.346702542673685 0.15597767086463554 LDIDSPPITAR ddPTM_KYSE-520_SHP099_60min_R1 6 LDIDSPPITAR 11 0 P14618;B4DNK4;H3BUW1;H3BTJ2;H3BT25;H3BU13;H3BN34;H3BQZ3;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;;;; 205.83 6.7872e-07 1890490000.0 1052220.0 1339840.0 964784.0 824978.0 1218490.0 1301290.0 893770.0 1108380.0 1285590.0 1142710.0 False True 993851.2590514321 1275472.0752591572 1026975.5203489801 903383.6610813194 1314378.2307402678 1293168.166420985 984120.9939546094 1104535.2884778364 1052159.2630866014 1132586.4784149276 0.8775058487739872 1.1261586638789827 0.9067524113357316 0.7976288595159805 1.1605102619446424 1.1417831583428348 0.8689146592425349 0.9752326286145061 0.928988013841658 1.0 20.11118978049383 -3.9824869214069776 18.38673515100526 0.987423430668628 0.6467936514810845 0.07786402678792548 0.11546819771226535 63525461.811267264 1408621356.3977487 0.02971142630346341 607392916.4733827 0.00010411494609230308 3.9824869214069776 -0.34062977918754356 LDIPT(ph)GTTPQRK ddPTM_KYSE-520_SHP099_60min_R1 4 LDIPTGTTPQRK 12 1 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPT(0.333)GT(0.333)T(0.333)PQRK;LDIPT(0.333)GT(0.333)T(0.333)PQRK;LDIPT(0.592)GT(0.204)T(0.204)PQRK;LDIPT(0.366)GT(0.269)T(0.366)PQRK 107.53 0.00053209 11225830000.0 7511200.0 7873900.0 7030200.0 5251550.0 5842670.0 6792600.0 5727820.0 6996060.0 8607000.0 7127700.0 True False 7094538.762794013 7495626.025035152 7483377.940717716 5750655.733063916 6302454.888755126 6750204.863812962 6306843.943736194 6971792.300752679 7044185.76481334 7064554.12326668 1.0042443782019561 1.0610189821249671 1.0592852443541574 0.8140153833805986 0.8921235195860944 0.9555033121738811 0.8927447980000587 0.986869401678374 0.9971168232137598 1.0 22.752167077590215 -5.210591445088585 24.999968500423435 0.9309315666591553 1.0434665666280225 0.4332946358307497 0.056226465428415716 337.9513968353027 166157.0873908822 0.01580702472097648 0.027378512727466355 6.157558618499492e-06 5.210591445088585 0.11253499996886718 LDIPTGT(ph)TPQRK ddPTM_KYSE-520_SHP099_60min_R1 3 LDIPTGTTPQRK 12 1 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPT(0.011)GT(0.495)T(0.495)PQRK;LDIPT(0.343)GT(0.446)T(0.212)PQRK;LDIPT(0.028)GT(0.632)T(0.34)PQRK 124.42 0.00012043 6243180000.0 2921930.0 3045520.0 2374840.0 1816060.0 2141920.0 2670210.0 2253130.0 2530830.0 3039020.0 2673930.0 True False 2759844.7181769516 2899208.647781279 2527925.986278348 1988657.7963816535 2310476.918142285 2653544.2289258908 2480898.3688297365 2522051.1414301638 2487210.5754598635 2650241.06048606 1.0413561088178107 1.09394148743947 0.9538475665359742 0.7503686460947553 0.8717987780773945 1.0012463652794001 0.936102909965003 0.9516308455984808 0.9384846580724636 1.0 21.337692159547476 -4.865399681329096 5.270180208633024 0.9165669969846499 1.0663568329941508 0.4082436615779711 0.06895573448848652 0.1942755343998566 8.22619484646299 0.019456399497736834 0.042370659295745676 1.3633278880508198e-05 4.865399681329096 0.1497898360095009 LDIPTGTT(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 2 LDIPTGTTPQR 11 0 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPT(0.172)GT(0.129)T(0.7)PQR;LDIPTGT(0.022)T(0.978)PQR 204.32 0.00037924 700940000.0 1606900.0 1888170.0 1363170.0 1298230.0 1347050.0 1932170.0 1486780.0 1965470.0 1893270.0 1816340.0 True False 1517762.0537242673 1797459.4789990506 1451042.119349118 1421613.3888729177 1453055.1713339277 1920110.6103279302 1637078.231974485 1958652.2433141442 1549499.893452789 1800248.640691136 0.8430846825367306 0.998450679739986 0.806023171772565 0.7896761351405015 0.8071413795241547 1.0665807860800705 0.9093622930585811 1.0879898470925635 0.8607143804635332 1.0 20.77976474694534 -6.251655996089022 24.77274386766982 0.9857058802606936 0.8515154498077726 0.40411277633382325 0.08257242729000545 644.8424951655703 1632822.0005050306 0.02716588804444277 0.026842256669327814 5.60201160174829e-07 6.251655996089022 -0.134190430452921 LDIPTGTT(ph)PQRK ddPTM_KYSE-520_SHP099_60min_R1 1 LDIPTGTTPQRK 12 1 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LDIPTGT(0.085)T(0.915)PQRK 165.86 5.1675e-06 793840000.0 515950.0 518110.0 420300.0 366840.0 378110.0 511860.0 396930.0 470970.0 584710.0 516670.0 True False 487329.22497917427 493219.2179010351 447393.21050377755 401704.3633055321 407865.10584838805 508665.291875173 437055.55806348834 469336.31499522435 478541.403339608 512092.7057631779 0.9516425824751823 0.9631443923146388 0.8736566747948931 0.7844367997916847 0.796467321752888 0.9933070441163637 0.8534696025637374 0.9165065421030882 0.9344819755368943 1.0 18.966045483954712 -8.071391550172507 1.0785690200476117 0.9999079000487302 0.8852337415519154 0.2197475382142562 0.06449096883942254 1.009093159488347 2.5906502779944174 0.0665354552080416 0.02152024054689824 8.484152179709849e-09 8.071391550172507 -0.11467415849681484 LDIYLFSFR ddPTM_KYSE-520_SHP099_60min_R1 1 LDIYLFSFR 9 0 Q6GYQ0-3 Q6GYQ0-3 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 0 66.27 0.047508999999999996 695550000.0 19448.0 16095.0 17182.0 17723.0 22923.0 11591.0 16085.0 17556.0 23253.0 18126.0 False True 18369.180671373153 15321.772040912461 18289.579212172008 19407.388591385738 24726.909685971284 11518.656269536863 17711.028774472077 17495.102333601204 19030.841360428072 17965.41774181462 1.0224744526045042 0.8528480807463187 1.0180436366699617 1.0802636971927972 1.3763615208578897 0.6411571628934137 0.985840075026452 0.9738210702933584 1.0593041383131143 1.0 14.132934861621361 -8.77477212423216 14.502871196024362 0.9999610014434079 0.998784610219812 0.0 0.1742938609439481 0.0 0.0 0.16942280390205677 0.04109106563979342 1.6796851233475046e-09 8.77477212423216 -0.0011763912235959184 LDKDEIR ddPTM_KYSE-520_SHP099_60min_R1 1 LDKDEIR 7 1 Q15293;Q15293-2 Q15293 RCN1 Reticulocalbin-1 0 117.04 0.0029343000000000004 1034000000.0 3842900.0 3501400.0 2287700.0 2351900.0 3905700.0 3818800.0 2884200.0 3479500.0 3329200.0 3484100.0 False True 3629726.676368776 3333187.488291453 2435168.80244942 2575423.86887548 4213056.369606859 3794965.452688062 3175763.0830794103 3467430.4266214063 2724701.2023023753 3453233.5845887833 1.0511095144468803 0.9652366127698178 0.705185080243972 0.7458006548902962 1.2200322585790433 1.0989599630978837 0.9196490782588012 1.004111173392956 0.789028930583286 1.0 21.719516493996267 -4.310269868540414 5.030195372765537 0.937955680593789 1.0529589834816537 0.049136296476563146 0.15089347354877428 0.6261523561388014 35.37997320729758 0.040748209136424594 0.19827709046468475 4.894745676627929e-05 4.310269868540414 0.11500330288786476 LDKDNLSYIEHIFEISR ddPTM_KYSE-520_SHP099_60min_R1 4 LDKDNLSYIEHIFEISR 17 1 Q15121-2;Q15121 Q15121-2 PEA15 Astrocytic phosphoprotein PEA-15 0 ;;; 206.98 1.1447000000000002e-13 976347000.0 1433704.0 1519867.0 1046259.0 1405583.0 1828515.0 1718419.0 1303637.0 1175794.0 1210536.0 943256.0 False True 1354173.5811019342 1446850.3079531235 1113702.5292135875 1539169.18571606 1972408.7276728097 1707693.7096058386 1435421.3502310491 1171715.4450463825 990733.1775292295 934899.4856820642 1.4484697037927932 1.5475998544352187 1.191253761789243 1.6463472376318034 2.1097548537357698 1.8266067483821276 1.5353750560508916 1.2533063318475859 1.059721598634137 1.0 19.834451738578164 -9.619347971583458 7.806479816899442 1.0000123571894863 1.5283985083277287 0.21521087147490747 0.29268098106017115 0.0 0.0 0.31510164565156046 0.07642337457807834 2.402437113914167e-10 9.619347971583458 0.5283861511382424 LDKENALDR ddPTM_KYSE-520_SHP099_60min_R1 7 LDKENALDR 9 1 J3KN67;A0A2R2Y2Q3;P06753;A0A494C0P6;H0YKP3;H0YLS7;D6RGJ6;A0A087WTJ7;P09493-4;P09493-9;P09493-8;P09493-7;P09493-6;A0A0S2Z4G6;P09493-3;P09493-10;P09493;Q6ZN40 J3KN67;P09493-4 TPM3;TPM1 Tropomyosin alpha-3 chain;Tropomyosin alpha-1 chain 0 ;;;;;; 106.16 0.0016530999999999998 6659820000.0 11963420.0 12069150.0 8634620.0 7653790.0 12501270.0 12122560.0 8821400.0 11301270.0 11477990.0 10560690.0 False True 11299785.244113488 11489329.917836528 9191221.421080478 8381203.900404117 13485048.826503616 12046898.606404675 9713153.200567493 11262068.532106249 9393876.352581589 10467130.50269249 1.0795494754944357 1.0976580367351962 0.8781032603650248 0.8007164808204307 1.2883233683801705 1.1509265699234204 0.9279671442014552 1.0759461276621394 0.8974643384989969 1.0 23.319362655006067 LDLAGR ddPTM_KYSE-520_SHP099_60min_R1 8 LDLAGR 6 0 P60709;A0A2R8Y793;Q6S8J3;P63267-2;A5A3E0;P0CG38;A0A2R8YEA7;P0CG39;Q9BYX7;P63261;I3L3I0;I3L1U9;I3L4N8;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;POTEE;ACTG2;POTEF;POTEI;POTEJ;POTEKP;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 0 ;;;;;;; 159.65 0.049304 67415300000.0 28757220.0 35644900.0 24047080.0 18667200.0 29381050.0 32749400.0 23913010.0 27913410.0 27410370.0 29105070.0 False True 27161999.68050315 33932465.49991433 25597193.25348837 20441325.075501647 31693171.47969316 32544998.846826922 26330370.41928743 27816584.895748887 22433337.76719722 28847221.723201796 0.9415811318376208 1.176281925015416 0.8873365171558468 0.70860637019546 1.098655939341374 1.1281848615823897 0.912752384681466 0.964272579268042 0.7776602538175836 1.0 24.78192904376971 -7.285416226683958 2.581920817011899 0.8934662041930435 0.985343327450187 0.05421658936274798 0.13760425766947368 0.9349360970196183 12.088412292250524 0.09507105434536386 0.04082647797699414 5.183030605318628e-08 7.285416226683958 0.09187712325714359 LDLAGTLPGS(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 2 LDLAGTLPGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLAGT(0.012)LPGS(0.988)KR;LDLAGTLPGS(1)KR 130.72 4.2881000000000005e-05 579900000.0 634970.0 637560.0 536820.0 531630.0 527200.0 513690.0 486180.0 583240.0 687080.0 552220.0 True False 599746.948318686 606930.6606029293 571424.2761423693 582155.9553596128 568687.6406423264 510483.8701663702 535327.8190595486 581216.8765692388 562323.5918773034 547327.7604206587 1.0957729384267656 1.108898003157124 1.0440257510475819 1.0636331599774627 1.0390257570806407 0.932684046162812 0.978075401562151 1.0619174078116083 1.027398265794374 1.0 19.06204550621616 -5.397629356499623 1.2585651299551337 1.003925487510366 1.09807573475873 0.5192855531109142 0.03520881926380482 0.4298245869834203 1.3478147288810975 0.014055185638022126 0.030342514474766154 4.002862235806209e-06 5.397629356499623 0.09415024724836396 LDLHLK ddPTM_KYSE-520_SHP099_60min_R1 1 LDLHLK 6 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 76.592 0.052036 306720000.0 1478000.0 1401700.0 767020.0 805100.0 1388500.0 1492800.0 956270.0 1001300.0 875930.0 1027700.0 False True 1396012.3936800458 1334360.2280054074 816463.3364753913 881616.4619378588 1497767.0505156873 1483482.8814739555 1052939.1038958305 997826.7240051767 716883.1923983899 1018595.3775385012 1.370526928026707 1.310000278255701 0.801558061699068 0.8655217580786 1.4704239618042783 1.456400563154806 1.0337167506496279 0.9796104969732798 0.7037958429880004 1.0 19.958149644629835 -7.200912732998542 2.815002024222912 0.8662460711146284 1.1945318989845939 0.27905007856551334 0.2264734406229751 0.41419526162903914 6.406470559480641 0.14660758459585854 0.07073393587425711 6.296326883481935e-08 7.200912732998542 0.3282858278699655 LDLKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 LDLKSPK 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 LDLKS(1)PK;LDLKS(1)PK 95.573 0.0040741 1272040000.0 1943390.0 1888630.0 1569730.0 1707880.0 1952760.0 2074800.0 1973360.0 2538900.0 3390400.0 2434200.0 True False 1835586.28264808 1797897.379908576 1670917.3074568005 1870196.401707154 2106431.1023154603 2061850.403592018 2172846.4869376556 2530093.148483715 2774788.825028827 2412634.881778945 0.7608222431463061 0.745200773431123 0.6925694890993026 0.7751676044442222 0.8730832494481274 0.8546052364424583 0.9006114034691886 1.0486846425009666 1.1501072317179006 1.0 21.20217816987442 -6.7524111904233095 0.8801031402974311 1.0878902744917256 0.7412939587168359 0.8559378571868658 0.05305960484165316 0.21663906104391742 0.32996804105907906 0.04318870375446633 0.025396857604855397 1.7684338106342246e-07 6.7524111904233095 -0.3465963157748897 LDLLEDR ddPTM_KYSE-520_SHP099_60min_R1 7 LDLLEDR 7 0 Q14697;Q14697-2;F5H6X6;E9PKU7;E9PNH1 Q14697 GANAB Neutral alpha-glucosidase AB 0 ;;;;;; 187.63 0.0007815000000000001 2291430000.0 3221220.0 3872450.0 3102180.0 1937510.0 3386170.0 3829650.0 2698600.0 3032340.0 3443280.0 3261930.0 False True 3042532.5052571306 3686411.689334047 3302151.4864634946 2121650.3678663773 3652642.314328202 3805747.7338134595 2971400.823797971 3021821.5202934737 2818067.1500251526 3233031.837943135 0.941077186296068 1.1402336488215203 1.021379204407815 0.6562417180574931 1.1297885382570265 1.177145145664476 0.9190756456293934 0.9346711296898227 0.8716484375291571 1.0 21.624456284093 LDLLGNLPGS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 3 LDLLGNLPGSK 11 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLLGNLPGS(1)K;LDLLGNLPGS(1)K;LDLLGNLPGS(1)K 145.86 7.3331e-05 1859898000.0 2381630.0 2283670.0 2176000.0 2002170.0 1921320.0 1865020.0 1778190.0 2161230.0 2470190.0 2106950.0 True False 2249516.2362383013 2173959.0653414456 2316268.4417231022 2192455.634825637 2072516.9531845886 1853379.7183859586 1957946.7986620157 2153733.1975648734 2021665.764422475 2088284.0621822968 1.0772079703982005 1.0410265081799346 1.1091730687742536 1.0498838134762563 0.9924497297646225 0.8875132229133336 0.9375864299878456 1.0313411075474956 0.9680990249524749 1.0 20.99388653948272 -5.777292593868721 3.3743093552647534 0.9632306107862941 1.072645849613485 0.6207609830559583 0.03883509570607177 0.16437526032484567 3.9110388303949524 0.013074161782285178 0.01603477017331428 1.6699651425015348e-06 5.777292593868721 0.10941523882719084 LDLLGNLPGS(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 3 LDLLGNLPGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLLGNLPGS(1)KR;LDLLGNLPGS(1)KR;LDLLGNLPGS(1)KR 159.4 2.5672e-06 3701390000.0 4632840.0 4245620.0 4054000.0 4165380.0 3638500.0 3509250.0 3612350.0 4215140.0 4904520.0 4269810.0 True False 4375847.12986243 4041654.042394459 4315327.326629344 4561256.462832842 3924829.2497668993 3487347.469059806 3977521.591138591 4200518.663161074 4013982.8008879125 4231982.805261911 1.033994543744753 0.9550261020364252 1.0196939650283563 1.0778060008092478 0.9274208876479586 0.824045755744506 0.9398718695626714 0.9925651536056065 0.9484875023350888 1.0 22.012902335052633 -5.789247892319723 24.984978620414157 0.932682774879654 1.0167344311540574 0.3654264345752243 0.05300283186319937 246.55883642730475 221523.32708332097 0.0175575349965541 0.01991252051368126 1.6246211683947993e-06 5.789247892319723 0.08405165627440336 LDLQYAK ddPTM_KYSE-520_SHP099_60min_R1 2 LDLQYAK 7 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 125.25 0.017247 941350000.0 1264230.0 1570170.0 996570.0 782950.0 1425480.0 1518460.0 1147060.0 1250900.0 1252850.0 1354650.0 False True 1194100.6417199771 1494736.6763267808 1060810.496768379 857361.3325974985 1537657.1661282692 1508982.727895861 1263016.01902679 1246560.9198622536 1025364.0217783657 1342648.8549017522 0.8893618293126649 1.1132744580757548 0.7900878125323417 0.638559612565443 1.1452414832922093 1.1238848656421638 0.940689752511062 0.9284340543034018 0.7636874064540101 1.0 20.356650613083247 -3.9629385298582043 17.427033421531405 0.938267953524289 0.6729877056528721 0.008379619937165517 0.15940300631855808 8864.799255124428 55864.874598227725 0.04044600420754182 78001.08318672697 0.00010890842316597831 3.9629385298582043 -0.2652802478714169 LDLRDDKDTIEK ddPTM_KYSE-520_SHP099_60min_R1 2 LDLRDDKDTIEK 12 2 P63000-2;B1AH77;B1AH78;B1AH80;P63000;P15153 P63000-2 RAC1;RAC2 Ras-related C3 botulinum toxin substrate 1;Ras-related C3 botulinum toxin substrate 2 0 ; 92.295 0.0016410999999999997 1027360000.0 2172300.0 2853500.0 1710990.0 1837820.0 2898100.0 2618600.0 1715330.0 2452600.0 3524600.0 1973590.0 False True 2051798.1886273108 2716413.576809179 1821283.1530807922 2012485.8602392678 3126163.9820666327 2602256.3460796475 1888732.2964075361 2444092.5030411445 2884621.4879355244 1956105.5280297878 1.0489199888381817 1.3886845765142244 0.931076123952888 1.0288227457064993 1.5981571225430466 1.3303251326633028 0.9655574657620283 1.2494686344978856 1.4746758017911992 1.0 20.899552772261828 -3.9627783300414037 10.805672621820086 1.2188830175866396 0.6199366046285109 0.0509238065121802 0.21966012304281796 63469.636817075676 714430.665502404 0.0556351174088053 651228.7977347719 0.00010894860403046559 3.9627783300414037 -0.5989464129581288 LDLTENLT(ph)GSK ddPTM_KYSE-520_SHP099_60min_R1 3 LDLTENLTGSK 11 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLTENLT(1)GSK;LDLTENLT(0.998)GS(0.002)K;LDLT(0.001)ENLT(0.996)GS(0.003)K 216.06 4.8704e-09 514310000.0 1844080.0 1779490.0 1524590.0 1373440.0 1310970.0 1523900.0 1353080.0 1887140.0 2043520.0 2059910.0 True False 1741785.2063176576 1694000.6293310535 1622867.5108302496 1503971.3246602062 1414135.8806010473 1514388.7748379973 1489862.5311882289 1880593.9518017862 1672468.2809470594 2041660.7999857306 0.8531217361521714 0.8297169781302032 0.7948761669135206 0.7366411328809945 0.6926399726198058 0.7417435721196104 0.7297306835683194 0.9211098884863391 0.8191704914737789 1.0 20.96131176716215 -7.983410113836199 1.0550500551202748 0.9918595908494019 0.7696391320664296 0.5490583696192626 0.06052208876491374 0.4267131896940689 1.0709741561006592 0.061561584098885215 0.020263078683278316 1.0389386098577273e-08 7.983410113836199 -0.22222045878297225 LDLTENLT(ph)GSKR ddPTM_KYSE-520_SHP099_60min_R1 3 LDLTENLTGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLTENLT(0.994)GS(0.006)KR;LDLTENLT(0.974)GS(0.026)KR;LDLTENLT(0.982)GS(0.018)KR 141.55 5.9738e-05 690310000.0 522180.0 453250.0 512710.0 442880.0 348000.0 394570.0 367900.0 481850.0 517070.0 513450.0 True False 493213.6344599776 431475.18965788 545760.1069650052 484971.1820432727 375385.62015085336 392107.3422716896 405090.9223579903 480178.57481463545 423183.1222739665 508901.23245805583 0.9691735900848477 0.8478564447050001 1.0724283459266082 0.9529770240500341 0.7376394400494855 0.7704979223134569 0.7960108887953583 0.943559465351093 0.831562384374547 1.0 18.957026159677984 -5.638067839528171 10.056088847597366 0.8374908653369029 0.9617074056940719 0.2801013824637707 0.08897017166401126 0.39237868702824263 32.81670091005235 0.026485774054605848 0.034194048951904976 2.3010823458057097e-06 5.638067839528171 0.124216540357169 LDLTENLTGS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 6 LDLTENLTGSK 11 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLT(0.02)ENLT(0.199)GS(0.781)K;LDLTENLT(0.001)GS(0.999)K;LDLTENLT(0.016)GS(0.984)K;LDLTENLTGS(1)K;LDLTENLTGS(1)K;LDLTENLTGS(1)K 220.09 7.7486e-10 2973600000.0 5185580.0 4864290.0 4897240.0 4436510.0 4140340.0 3908200.0 4257470.0 4900620.0 5685090.0 4779840.0 True False 4897925.540202547 4630602.20695185 5212923.926261048 4858154.576514626 4466161.202687888 3883807.4741268167 4687856.6165030515 4883620.89303331 4652820.965456333 4737494.336259248 1.0338641468582686 0.9774369905860826 1.100354650846338 1.0254692104498961 0.9427264468698857 0.8198020300312365 0.989522368527961 1.0308446926586607 0.982126971602931 1.0 22.17569278784683 -5.710345493970736 6.507216644262873 0.9568037254829238 1.0357080857414378 0.26532729024218926 0.05972316902853716 0.2954187666914833 27.653726450130723 0.019318138693377153 0.02476656355378896 1.948294058145742e-06 5.710345493970736 0.078904360258514 LDLTENLTGS(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 3 LDLTENLTGSKR 12 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDLTENLT(0.012)GS(0.988)KR;LDLTENLT(0.002)GS(0.998)KR;LDLTENLT(0.002)GS(0.998)KR 194.55 6.6974e-08 526170000.0 776510.0 730610.0 657670.0 592990.0 605040.0 565240.0 609862.0 688960.0 819890.0 675690.0 True False 733435.4423656916 695510.3989320319 700064.460509205 649347.5913110554 652653.2057933107 561712.1274948677 671512.802639545 686570.1585644725 671018.6437449525 669703.9122788653 1.0951637416451114 1.0385341733563305 1.0453342853068142 0.9696039987305112 0.9745399329869007 0.8387469704088726 1.0027010300037287 1.0251846315608562 1.0019631533308704 1.0 19.35316387045288 -5.095792688702491 1.998420886164928 0.9690676282246029 1.070562002068184 0.3878375877788881 0.04998205963324236 0.3801967530603645 2.9521353749866184 0.016064241522005557 0.038133990307397524 8.020608372886906e-06 5.095792688702491 0.10149437384358118 LDNARQS(ph)AER ddPTM_KYSE-520_SHP099_60min_R1 1 LDNARQSAER 10 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 LDNARQS(1)AER 89.189 0.005935800000000001 446200000.0 595220.0 561800.0 583640.0 462980.0 539700.0 436310.0 383350.0 491350.0 784190.0 448700.0 True False 562201.9600583477 534810.2847210086 621262.3682570177 506981.4799999878 582171.3195270557 433586.8274490235 422102.7591354596 489645.6215319523 641800.8638211885 444724.86708331783 1.264156789220021 1.2025643814984008 1.3969589160406137 1.1399890528383843 1.3090595166066747 0.9749552128547656 0.9491323521074434 1.101007966438312 1.443141392183381 1.0 18.762553550623334 -6.246867347553671 24.919163907452415 1.0909281880198434 1.259872132354614 0.25802718200903707 0.14313146398831503 1165.5946902323358 1993246.762141568 0.04850740249231751 0.048296499718818435 5.664122695908311e-07 6.246867347553671 0.16894394433477067 LDNNWGR ddPTM_KYSE-520_SHP099_60min_R1 1 LDNNWGR 7 0 G3V3R6;P17931 G3V3R6 LGALS3 Galectin;Galectin-3 0 85.212 0.064817 334030000.0 289890.0 284830.0 179310.0 167350.0 290790.0 262960.0 186900.0 241800.0 250780.0 254800.0 False True 273809.22381861205 271146.3392614536 190868.60950614393 183254.893684388 313673.5186312257 261318.7690999407 205793.6759682209 240961.25223654436 205244.67364934206 252542.67023140038 1.084209743912684 1.0736654483498056 0.7557875638649675 0.7256393286586966 1.242061463687749 1.0347509546030338 0.8148867507406008 0.9541407478417641 0.8127128515006197 1.0 17.94616764420329 -4.574333193543108 24.998887777736776 0.9206954998923544 1.0815748922133612 0.16439201929261804 0.14553238171865054 167.47323489041833 81365.21331741025 0.03901428793123714 0.10322213774326194 2.664813417921849e-05 4.574333193543108 0.1608793923210068 LDNS(ph)PNMNITQPSK ddPTM_KYSE-520_SHP099_60min_R1 2 LDNSPNMNITQPSK 14 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 LDNS(1)PNMNITQPSK;LDNS(1)PNMNITQPSK 164.82 3.4310999999999995e-08 1037820000.0 702790.0 725120.0 612090.0 563830.0 572590.0 613200.0 546190.0 671070.0 793060.0 721770.0 True False 663804.8377228688 690284.1467726905 651546.3007786267 617416.2336783299 617649.5754085553 609372.7913450095 601404.2155007091 668742.2147989151 649060.2954156924 715375.6793285636 0.9279108263030438 0.9649253765805632 0.910775022978352 0.8630657310824762 0.8633919117690275 0.8518220690937576 0.8406830604937175 0.9348126224064288 0.9072999183098963 1.0 19.448341546210685 -8.298294986835163 1.4187319684250508 0.9994626376028926 0.8913189108053693 0.4092274965775098 0.03804546555347788 1.2263097979563393 4.069123474437904 0.04140268852891331 0.01218930259926041 5.031587310370934e-09 8.298294986835163 -0.10814372679752327 LDNTPAS(ph)PPRS(ph)PAEPNDIPIAK ddPTM_KYSE-520_SHP099_60min_R1 10 LDNTPASPPRSPAEPNDIPIAK 22 1 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3;H0Y911;Q4VXL4;O95359-2;H0Y8P9 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 2 LDNT(0.161)PAS(0.885)PPRS(0.953)PAEPNDIPIAK;LDNT(0.217)PAS(0.79)PPRS(0.994)PAEPNDIPIAK;LDNT(0.024)PAS(0.976)PPRS(1)PAEPNDIPIAK;LDNTPAS(1)PPRS(1)PAEPNDIPIAK;LDNT(0.153)PAS(0.847)PPRS(1)PAEPNDIPIAK;LDNT(0.14)PAS(0.896)PPRS(0.964)PAEPNDIPIAK;LDNT(0.003)PAS(0.997)PPRS(1)PAEPNDIPIAK;LDNT(0.008)PAS(0.993)PPRS(1)PAEPNDIPIAK;LDNT(0.004)PAS(0.996)PPRS(1)PAEPNDIPIAK;LDNT(0.148)PAS(0.857)PPRS(0.995)PAEPNDIPIAK 222.63 7.3749e-20 18680200000.0 9501610.0 8639480.0 8439110.0 9439130.0 10025560.0 11586640.0 12153550.0 13228960.0 13856200.0 12448730.0 True False 8974536.752310058 8224426.412676132 8983108.533653405 10336222.077222077 10814514.53436662 11514323.48191411 13382149.441217607 13183071.825422464 11340263.366376953 12338443.937165383 0.7273637419770013 0.6665691763531731 0.7280584634011127 0.8377249294854523 0.8764893360492209 0.9332070997406011 1.0845897188792515 1.0684549763777689 0.9190999630203166 1.0 23.55665712468848 -5.785786478858989 1.042556425589597 1.02142879706458 0.6894679150536583 0.8658038552294166 0.050454355416923176 0.17697851808578433 0.4116223045606199 0.023741753541869796 0.035368021322230624 1.6376214611049758e-06 5.785786478858989 -0.33196088201092155 LDNTPAS(ph)PPRSPAEPNDIPIAK ddPTM_KYSE-520_SHP099_60min_R1 1 LDNTPASPPRSPAEPNDIPIAK 22 1 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3;H0Y911;Q4VXL4;O95359-2;H0Y8P9 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 1 LDNT(0.018)PAS(0.981)PPRS(0.001)PAEPNDIPIAK 154.49 1.6756e-07 735600000.0 598900.0 649820.0 460420.0 371580.0 320920.0 323170.0 228520.0 242070.0 248850.0 241930.0 True False 565677.8231224491 618601.6718002941 490099.4098980464 406894.8514803989 346174.57821497624 321152.9761561754 251621.0317402774 241230.31566956302 203665.1129980016 239786.68841869204 2.3590876826937026 2.579799887473955 2.0438974870960425 1.6969034193004031 1.44367721368469 1.3393277928564973 1.049353629259525 1.0060204645236615 0.8493595467750967 1.0 17.87139204525987 -5.461317108109578 0.6634457601317698 0.9272180209889918 2.692235881924289 0.9639779155810877 0.11025289330400806 0.1681224275855791 0.1395934119874166 0.0652344291562742 0.18260959578265062 3.4568687601768783e-06 5.461317108109578 1.7650178609352971 up LDNVPHT(ph)PSSYIETLPK ddPTM_KYSE-520_SHP099_60min_R1 3 LDNVPHTPSSYIETLPK 17 0 Q99733;Q99733-2;E9PNJ7;C9J6D1;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHT(0.992)PS(0.008)SYIETLPK;LDNVPHT(0.978)PS(0.022)SYIETLPK;LDNVPHT(0.798)PS(0.202)SYIETLPK 173.55 2.6854e-08 1666850000.0 1319480.0 1581120.0 1241180.0 1525370.0 1085820.0 1400710.0 1084320.0 1327530.0 1642980.0 1500910.0 True False 1246285.8140818307 1505160.6218904965 1321188.4487582142 1670340.7061807862 1171267.856529308 1391967.6493230066 1193933.6475433975 1322925.1082778305 1344656.24815534 1487613.1050903122 0.8377755007785908 1.0117957530356114 0.8881263846341322 1.122832744928918 0.7873470948336402 0.9357054227070022 0.8025834428709974 0.889293798065537 0.9039018569775955 1.0 20.504567931828447 -5.800765393612965 24.999999877249238 0.8792039897590364 0.9629665255423496 0.1503526517718824 0.0905647718556377 272.33938052088797 173127.81121445727 0.02631855387687214 0.029842872298384702 1.5821024620698005e-06 5.800765393612965 0.08376253578331327 LDNVPHTPS(ph)SYIETLPK ddPTM_KYSE-520_SHP099_60min_R1 1 LDNVPHTPSSYIETLPK 17 0 Q99733;Q99733-2;E9PNJ7;C9J6D1;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHT(0.489)PS(0.509)S(0.002)YIETLPK 197.85 1.0095e-12 804670000.0 516870.0 694910.0 543530.0 625370.0 419680.0 555000.0 456730.0 562640.0 651640.0 728310.0 True False 488198.1907452003 661525.4805188243 578566.8134787489 684804.9767756528 452706.4283474427 551536.0391332026 502900.72565524647 560688.3331611634 533318.6025076063 721857.740016605 0.6763080364476943 0.9164208456137176 0.801497000593829 0.9486702695186175 0.6271407830814822 0.7640508767288628 0.6966756713638316 0.7767296824278227 0.7388139974717709 1.0 19.46135502069769 -1.1637724356006691 21.93567348051449 0.7880585171964187 0.04325261757750176 0.0 0.11714779167503954 0.0 0.0 0.02561451846737975 0.0 0.06858475070771516 1.1637724356006691 -0.744805899618917 LDNVPHTPSS(ph)YIETLPK ddPTM_KYSE-520_SHP099_60min_R1 3 LDNVPHTPSSYIETLPK 17 0 Q99733;Q99733-2;E9PNJ7;C9J6D1;E9PS34;A8MXH2;E9PNW0;E9PJJ2;E9PKI2;E9PP22 Q99733 NAP1L4 Nucleosome assembly protein 1-like 4 1 LDNVPHTPS(0.026)S(0.974)YIETLPK;LDNVPHTPS(0.276)S(0.722)YIET(0.002)LPK;LDNVPHTPS(0.203)S(0.797)YIETLPK 175.77 3.2621000000000005e-08 933840000.0 725520.0 722660.0 628430.0 604020.0 535900.0 647470.0 566550.0 644180.0 729430.0 835390.0 True False 685273.9593117366 687942.3288652253 668939.6033235515 661425.8791947645 578072.2811460989 643428.8995631984 623822.4029951605 641945.4899327427 596983.8994339255 827989.0945235849 0.8276364554125379 0.8308591664012908 0.8079087125035763 0.7988340469331194 0.6981641243460033 0.7770982780074172 0.7534186224446597 0.7753066968860386 0.7210045438791955 1.0 19.659252240494318 -10.54151963826457 2.9550262156891636 1.0098477074682644 0.7768318110360974 0.727555895457989 0.04099488161228607 19645877.40728412 22381377.839488015 1550462.2885208703 0.011421278204466982 2.873957633832412e-11 10.54151963826457 -0.2330158964321669 LDPDSIPS(ph)PIQVIENDR ddPTM_KYSE-520_SHP099_60min_R1 2 LDPDSIPSPIQVIENDR 17 0 O94855;O94855-2 O94855 SEC24D Protein transport protein Sec24D 1 LDPDSIPS(1)PIQVIENDR;LDPDS(0.001)IPS(0.999)PIQVIENDR 148.03 6.8635000000000004e-06 57402000.0 108520.0 121061.0 107864.0 95896.0 108148.0 116537.0 89291.0 116084.0 144544.0 110241.0 True False 102500.17927074338 115245.04784373437 114817.08602850208 105009.92700781632 116658.63232205322 115809.64935579478 98317.40567618198 115681.33169820921 118298.45325771812 109264.35050620009 0.938093520859094 1.0547360352194186 1.050819279083958 0.9610630230384031 1.0676733242049845 1.0599033336973278 0.8998122921217846 1.0587289556225843 1.082681155469875 1.0 16.737463246560882 -4.247866689206882 22.666941847842057 1.025132885849416 0.9380933032257365 0.19145211679808705 0.05425603461589776 1057.805052286983 1766460.724450565 0.013524202806195203 0.22899171842975452 5.65110414170596e-05 4.247866689206882 -0.0870395826236795 LDPFADGGKT(ph)PDPK ddPTM_KYSE-520_SHP099_60min_R1 10 LDPFADGGKTPDPK 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK;LDPFADGGKT(1)PDPK 170.16 6.6327e-08 46744030000.0 31491910.0 31354190.0 24864570.0 23222300.0 24189200.0 28507630.0 26233060.0 30777820.0 30749810.0 30139010.0 True False 29744990.974733822 29847887.64880132 26467379.9669186 25429340.409960885 26092752.42227878 28329703.306801584 28884953.714793414 30671058.92601716 25166419.643628977 29872001.819194928 0.9957481642767076 0.9991927501029371 0.886026324151848 0.8512767428134224 0.8734852314287251 0.9483697637095648 0.9669574168354775 1.0267493658998368 0.8424751644015276 1.0 24.832290584747938 -6.506467752388872 23.041187208894378 0.9607587594573055 0.9187769180222063 0.0751335181805115 0.0632420414254353 727.2173720955373 1021025.5241241509 0.024009683501859013 0.02057025120822034 3.115532224590349e-07 6.506467752388872 -0.0419818414350992 LDPFESS(ph)DPFSSSSVSSK ddPTM_KYSE-520_SHP099_60min_R1 1 LDPFESSDPFSSSSVSSK 18 0 Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R165;M0R3I1 Q9UBC2-3 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 LDPFES(0.004)S(0.996)DPFSSSSVSSK 176.49 8.8048e-09 52782000.0 102860.0 85951.0 82516.0 83343.0 84428.0 86686.0 92072.0 92954.0 111400.0 88992.0 True False 97154.15075367356 81821.78494491873 87835.11339026809 91263.89366201326 91072.00327039155 86144.96051946089 101379.53629612648 92631.56426962666 91172.56816547064 88203.60011472832 1.1014760239639092 0.9276467722234849 0.9958223165043044 1.0346957895517228 1.0325202503291502 0.9766603676880568 1.1493809341598293 1.0502016261143399 1.0336603953453205 1.0 16.42854992151895 LDPHLVLDQLR ddPTM_KYSE-520_SHP099_60min_R1 2 LDPHLVLDQLR 11 0 P35579;P35579-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 0 ; 105.17 0.0015419000000000001 1362700000.0 2110070.0 2103540.0 1485380.0 1330430.0 2271620.0 1943820.0 1447470.0 1536670.0 1486780.0 1495610.0 False True 1993020.210779737 2002482.7809220878 1581129.9714920302 1456873.6671916363 2450383.5702502327 1931687.8983565823 1593794.3935458572 1531339.650431474 1216818.2306737737 1482360.058966974 1.3444913054178156 1.3508747546244444 1.0666301766076232 0.9828068817550989 1.6530285981651813 1.3031165314199948 1.0751735949068537 1.0330416292372535 0.820865499790752 1.0 20.499464484035553 -7.0321703224658725 2.4234862710441845 0.940041887208808 1.2781135422640706 0.42253388033075934 0.17625715186187307 0.32615074918435405 3.781828349579145 0.10424141013662166 0.05581654998324731 9.286021343427386e-08 7.0321703224658725 0.3380716550552626 LDPHNHVLYSNR ddPTM_KYSE-520_SHP099_60min_R1 2 LDPHNHVLYSNR 12 0 P31948;P31948-2;P31948-3;F5H783;F5GXD8 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ; 90.412 0.0030408 897590000.0 3503500.0 3730400.0 2535400.0 3385900.0 3669400.0 3156000.0 2785300.0 2851000.0 2817700.0 2733600.0 False True 3309153.870945898 3551185.9845554437 2698835.940783429 3707694.9179920494 3958160.9039699496 3136302.2333412403 3066865.3059084294 2841110.546428401 2306076.708436684 2709382.430708621 1.2213683212230806 1.3106994215012513 0.9961074192385481 1.3684649593827647 1.4609088990566454 1.1575708906184061 1.1319425678516382 1.048619240394693 0.8511447783447629 1.0 21.369532614376258 -7.137564594412831 1.600082247187775 0.9360610241894444 1.2602698266327683 0.5354051002399902 0.12216810000174788 0.333435690681994 1.5943199112083797 0.09293775529787356 0.04000400284994239 7.285098121802153e-08 7.137564594412831 0.32420880244332395 LDPPPS(ph)PHANR ddPTM_KYSE-520_SHP099_60min_R1 5 LDPPPSPHANR 11 0 E7EUN2;A0A087X1U1;F5GXM9;Q9UPQ3-2;Q9UPQ3;H7C211;H7C0A7 E7EUN2 AGAP1 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 1 LDPPPS(1)PHANR;LDPPPS(1)PHANR;LDPPPS(1)PHANR;LDPPPS(1)PHANR;LDPPPS(1)PHANR 162.49 1.956e-05 3266480000.0 2738900.0 2646600.0 2460420.0 2314490.0 2574340.0 2312980.0 2250780.0 2615860.0 3060790.0 2369340.0 True False 2586967.75713821 2519453.363372411 2619022.6100111883 2534458.433723209 2776925.9120090464 2298543.833863631 2478310.8078959463 2606786.1922063124 2505027.6922369017 2348349.4909186265 1.1016110536963732 1.072861332231623 1.1152610035854076 1.0792509562670676 1.182501123767046 0.9787912075065485 1.055341556901942 1.1100503576180183 1.0667184343404463 1.0 21.163215701491932 -6.264281339848208 24.999957911306495 1.0498810406706003 1.1067683147352834 0.3690695425607825 0.043836764495051736 344.15830209052154 3027454.9136444055 0.015351778469623005 0.01409672667392824 5.441500333831083e-07 6.264281339848208 0.05688727406468308 LDPPPS(ph)PHSNR ddPTM_KYSE-520_SHP099_60min_R1 1 LDPPPSPHSNR 11 0 Q96P47;Q96P47-2;Q96P47-4;H0Y873 Q96P47 AGAP3 Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 1 LDPPPS(0.989)PHS(0.011)NR 80.17 0.010331 227480000.0 264410.0 262850.0 248890.0 265030.0 253190.0 204810.0 203420.0 232420.0 317330.0 257330.0 True False 249742.6502117329 250222.29145410645 264933.84763808013 290218.3715158252 273114.61254596116 203531.70481958805 223983.6787878839 231613.7892672358 259710.87123831935 255050.25639971037 0.9791899594107465 0.9810705348280944 1.0387515440207218 1.1378870016150855 1.0708266535436868 0.798006274107079 0.8781942898220833 0.9081103957184605 1.0182733195582636 1.0 17.96042202550064 -6.233748994854866 24.8900889394321 0.9121285745839576 1.0433825764009812 0.4160086401567711 0.0713364429143083 692.8451440868458 622778.8256130957 0.025038015111373692 0.025032293501903335 5.837824100831643e-07 6.233748994854866 0.13125400181702362 LDPYDS(ph)SEDDKEYVGFATLPNQVHR ddPTM_KYSE-520_SHP099_60min_R1 6 LDPYDSSEDDKEYVGFATLPNQVHR 25 1 A0A5F9ZHH3;O43236-2;O43236-3;O43236;O43236-4;A0A5F9ZHS9;J3QLA8;O43236-6 A0A5F9ZHH3 SEPT4 Septin-4 1 LDPYDS(0.973)S(0.027)EDDKEYVGFATLPNQVHR;LDPYDS(0.817)S(0.183)EDDKEYVGFATLPNQVHR;LDPYDS(0.962)S(0.038)EDDKEYVGFATLPNQVHR;LDPYDS(0.96)S(0.04)EDDKEYVGFATLPNQVHR;LDPYDS(0.724)S(0.276)EDDKEYVGFATLPNQVHR;LDPYDS(0.975)S(0.025)EDDKEYVGFATLPNQVHR 303.72 1.1714000000000001e-49 3473250000.0 1518730.0 1394680.0 1159230.0 1434770.0 1445230.0 1442330.0 1282960.0 1397450.0 1693890.0 1326260.0 True False 1434483.019386804 1327677.4793426415 1233955.8206335793 1571130.1094206686 1558961.3787661442 1433327.8834648523 1412654.1172829766 1392602.572117283 1386322.2754920023 1314510.368214666 1.0912679382933144 1.0100167419340016 0.9387189713151569 1.1952207813731717 1.1859635469315357 1.0903891807346955 1.0746618295613803 1.0594078265116158 1.0546301566071856 1.0 20.32609409059766 -5.252717044758604 24.99810291487372 1.0996350989286312 1.0130027780133748 0.24202051726273976 0.06520862734924474 935.8537520946564 2682139.499557061 0.018737996747278964 0.03189968196531847 5.588341725548212e-06 5.252717044758604 -0.08663232091525641 LDQPGNLPGS(ph)NRR ddPTM_KYSE-520_SHP099_60min_R1 4 LDQPGNLPGSNRR 13 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LDQPGNLPGS(1)NRR;LDQPGNLPGS(1)NRR;LDQPGNLPGS(1)NRR;LDQPGNLPGS(1)NRR 145.69 5.7819000000000005e-06 2680850000.0 2592040.0 2405480.0 2681500.0 2136980.0 1969090.0 1891720.0 1958300.0 2223660.0 2825420.0 2297280.0 True False 2448254.374096363 2289917.130100906 2854353.780551698 2340077.9366935333 2124046.1804104713 1879913.0737820938 2156264.075166219 2215946.642466144 2312394.951042048 2276927.886456795 1.0752445822542824 1.005704723334178 1.2535986745691166 1.027734760776727 0.9328561493072896 0.8256357546340611 0.9470058704940607 0.9732177534680091 1.01557671843549 1.0 21.11865716931928 -5.551754476485469 5.277320118318441 0.9433323802503829 1.1072981741806573 0.48444084567864143 0.07501043702762329 0.1557825862967732 11.701682275936456 0.023075002043126142 0.030813339808329808 2.8070201067986295e-06 5.551754476485469 0.16396579393027444 LDQPVS(ph)APPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 LDQPVSAPPSPR 12 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 2 LDQPVS(1)APPS(1)PR 103.13 0.0010904999999999999 745240000.0 813070.0 766400.0 735390.0 665680.0 760270.0 732010.0 740020.0 727310.0 922980.0 811670.0 True False 767967.3862851381 729580.9936101462 782794.4160656027 728946.0270560109 820098.9236554287 727441.2540646781 814828.443499212 724787.1313654294 755390.0984323709 804479.2352697044 0.9546143052749826 0.9068984774548615 0.9730448987948933 0.9061091885257042 1.0194159000020526 0.9042386952607931 1.012864481487876 0.9009395141472384 0.9389802313283124 1.0 19.617695657896363 LDQPVSAPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 LDQPVSAPPSPR 12 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 LDQPVS(0.002)APPS(0.998)PR;LDQPVS(0.001)APPS(0.999)PR;LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR;LDQPVSAPPS(1)PR;LDQPVS(0.001)APPS(0.999)PR 174.39 1.5291e-06 11602400000.0 20426730.0 20545560.0 16163400.0 14672210.0 16385520.0 18826960.0 16868970.0 19165900.0 23410220.0 19237010.0 True False 19293618.567223266 19558520.458085738 17205318.626354374 16066652.4270392 17674967.203144267 18709453.95913377 18574250.112881973 19099417.9662547 19159514.171621766 19066585.057567295 1.0119074028710697 1.0258009181525247 0.9023807134002632 0.8426602025758432 0.9270127371932967 0.9812692678130223 0.9741781266441355 1.0017220130709446 1.0048739254446402 1.0 24.184543135461094 -6.4231036627495115 3.6657314097554012 0.9938472767980443 0.9391491098031236 0.2095029258804354 0.04925729389514175 0.4604156079059699 11.345401681025466 0.02130225908229544 0.018203693375017215 3.774820781051432e-07 6.4231036627495115 -0.054698166994920694 LDRAS(ph)PDLWPEQLPGVAEFAASFK ddPTM_KYSE-520_SHP099_60min_R1 1 LDRASPDLWPEQLPGVAEFAASFK 24 1 Q52LA3 Q52LA3 LIN52 Protein lin-52 homolog 1 LDRAS(1)PDLWPEQLPGVAEFAASFK 208.76 4.8124e-21 2679800000.0 523200.0 562850.0 534810.0 536160.0 399620.0 468860.0 403570.0 458970.0 632240.0 474370.0 True False 494177.05302665744 535809.8411449254 569284.7083262552 587116.4851976176 431067.82047322986 465933.6708252142 444366.79406364256 457377.9401944037 517441.15347340313 470167.4508542751 1.0510660662041957 1.1396149184112614 1.210812673850323 1.2487391122691518 0.916838925557261 0.9909951656130846 0.9451245364949152 0.972797966689031 1.1005465234423049 1.0 18.8428151407852 -5.7646960116101065 24.999984863446244 0.9843913464195957 1.1643661394459155 0.6316126996575097 0.06537931773930171 55.937996623614424 429415.3234961262 0.020842611463056295 0.024617050754788376 1.7191112737629146e-06 5.7646960116101065 0.1799747930263198 LDRETEELHHDR ddPTM_KYSE-520_SHP099_60min_R1 5 LDRETEELHHDR 12 1 O60869-2;O60869-3;O60869 O60869-2 EDF1 Endothelial differentiation-related factor 1 0 ;;;; 214.42 1.0604e-10 2342090000.0 2464170.0 2760910.0 2257960.0 1950160.0 2554220.0 2478140.0 1963030.0 2426380.0 2832310.0 1821000.0 False True 2327477.5778988902 2628271.739389601 2403511.7144637387 2135502.620063016 2755222.5824761884 2462673.0090406435 2161472.229726573 2417963.4541013488 2318033.9007248096 1804867.3567165632 1.289556027060662 1.4562132389445976 1.3316832982320854 1.18319089328977 1.526551284903575 1.3644620475162055 1.1975795460441756 1.3396903906003028 1.2843236884409086 1.0 20.78346138381119 -10.312267495670563 0.3324748537930389 0.7865422604504764 1.3621910375761996 0.5224968869549935 0.09695921289658135 15.63094547872555 1.1494466834288046 2.999598563954662 0.0881912173521997 4.872282983862516e-11 10.312267495670563 0.5756487771257233 LDRPAGGPS(ph)AESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK ddPTM_KYSE-520_SHP099_60min_R1 1 LDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK 42 2 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 LDRPAGGPS(0.786)AES(0.204)PRPS(0.005)S(0.005)AYNGDLNGLLVPDPLCSGDSTSANK 110.11 3.2678e-05 6432000000.0 1779800.0 1555800.0 1227000.0 1124000.0 1034600.0 1214800.0 1327600.0 1416400.0 1560600.0 1104300.0 True False 1681070.946056661 1481057.0326965896 1306094.3832694138 1230824.6220570777 1116017.1339312422 1207217.9825928186 1461806.7641273933 1411486.838990246 1277234.379524537 1094516.7611324 1.5359024235658165 1.3531606689734659 1.1933068817677246 1.1245370247081936 1.0196437126980107 1.1029689315527855 1.3355727532349442 1.289598194485304 1.1669390774820982 1.0 20.061862617052206 -4.5063737398278585 2.030510985039183 1.1604569254434374 1.5590177709631383 0.607783638197849 0.09902087124734266 0.34175768668099743 2.2038968700079087 0.02973481712467286 0.20963932186373116 3.116206722839969e-05 4.5063737398278585 0.39856084551970095 LDRPAGGPSAES(ph)PRPSSAYNGDLNGLLVPDPLCSGDSTSANK ddPTM_KYSE-520_SHP099_60min_R1 4 LDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK 42 2 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 LDRPAGGPS(0.118)AES(0.87)PRPS(0.006)S(0.006)AY(0.001)NGDLNGLLVPDPLCSGDSTSANK;LDRPAGGPS(0.214)AES(0.661)PRPS(0.063)S(0.063)AYNGDLNGLLVPDPLCSGDSTSANK;LDRPAGGPS(0.186)AES(0.746)PRPS(0.034)S(0.034)AYNGDLNGLLVPDPLCSGDSTSANK;LDRPAGGPS(0.007)AES(0.83)PRPS(0.096)S(0.066)AYNGDLNGLLVPDPLCSGDSTSANK 260.66 4.1866e-42 9791400000.0 3041530.0 3359320.0 2426220.0 2412410.0 2152270.0 2680080.0 2207870.0 2727200.0 3441720.0 2782290.0 True False 2872810.2677602665 3197933.2247578762 2582618.0232892567 2641684.7210824857 2321641.4042588403 2663352.6265948 2431063.0463347035 2717739.9797332645 2816790.406700748 2757641.0751888645 1.041763663011697 1.1596626020443423 0.9365316054093005 0.9579508895665702 0.8418939742184672 0.965808295560144 0.8815734100451074 0.9855307147059132 1.0214492495212897 1.0 21.39500326231009 -4.7734538284894175 24.997418530619136 0.9430346805435851 1.1007131277638256 0.5265438533937965 0.057393597840309424 139.52548281360248 290299.9965814783 0.014889016579800277 0.03137464235078422 1.68479153389717e-05 4.7734538284894175 0.1576784472202405 LDRPAGGPSAESPRPS(ph)SAYNGDLNGLLVPDPLCSGDSTSANK ddPTM_KYSE-520_SHP099_60min_R1 1 LDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDSTSANK 42 2 Q6P2E9 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 LDRPAGGPS(0.24)AES(0.24)PRPS(0.259)S(0.259)AY(0.003)NGDLNGLLVPDPLCSGDSTSANK 102.93 0.00011924 457650000.0 253910.0 245680.0 219640.0 204560.0 221810.0 226470.0 184460.0 232080.0 286990.0 228540.0 True False 239825.10614296395 233877.16402680203 233798.34583642517 224001.32089679362 239265.1850737378 225056.51672521906 203107.01695611558 231274.9686478794 234879.85042915988 226515.31340142954 1.0587589092396013 1.0325004544497434 1.032152494794419 0.9889014457041118 1.0562870186604691 0.9935598319852874 0.8966590995822439 1.0210125098165652 1.0369270267079327 1.0 17.789249060344122 -6.421056900418955 7.26907435652533 0.984171340789882 1.0308024883444122 0.23746366419516796 0.039049020388962505 0.41047181381835335 25.688316455858523 0.01442854470950758 0.012681699428922588 3.792652911170281e-07 6.421056900418955 0.04663114755453024 LDS(ph)PDPFK ddPTM_KYSE-520_SHP099_60min_R1 7 LDSPDPFK 8 0 P42566;B1AUU8;P42566-2 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 LDS(1)PDPFK;LDS(1)PDPFK;LDS(1)PDPFK;LDS(1)PDPFK;LDS(1)PDPFK;LDS(1)PDPFK;LDS(1)PDPFK 159.11 0.00023595 5306540000.0 7698500.0 5571650.0 4995890.0 6525520.0 7115460.0 8377400.0 9071020.0 10073900.0 8977600.0 9144100.0 True False 7271448.858420734 5303979.570782846 5317933.063106623 7145703.458830866 7675406.220570661 8325113.539161245 9988007.226223925 10038955.99216594 7347494.1468790695 9063090.38800215 0.8023145027933059 0.585228585803837 0.5867681812096434 0.7884400522243993 0.8468862045921417 0.9185733764922118 1.1020531406644904 1.1076747072340418 0.8107051604170018 1.0 23.11157164246738 -5.908975661366013 1.4588368077298595 1.0082376252601122 0.6551116760396424 0.6723382947082162 0.09978878096160428 0.22809385103508434 1.0056628062713195 0.04019453913058638 0.048610166655588226 1.233173940549943e-06 5.908975661366013 -0.3531259492204698 LDS(ph)PDPFKLNDPFQPFPGNDS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 LDSPDPFKLNDPFQPFPGNDSPK 23 1 P42566;B1AUU8;P42566-2 P42566 EPS15 Epidermal growth factor receptor substrate 15 2 LDS(1)PDPFKLNDPFQPFPGNDS(1)PK;LDS(1)PDPFKLNDPFQPFPGNDS(1)PK 186.02 3.9082e-15 223664000.0 257670.0 221990.0 211262.0 215210.0 242520.0 295790.0 285860.0 344570.0 380890.0 313620.0 True False 243376.53144758978 211325.26718621663 224880.28655115157 235663.49369475417 261604.94424995693 293943.8648922702 314757.518524749 343374.7670932424 311729.9774555309 310841.5707926675 0.782960048834404 0.6798487945075126 0.7234562802449211 0.7581466439440386 0.8416021820467778 0.9456388479272351 1.0125978894074417 1.1046616648397862 1.0028580690175959 1.0 18.245819931740673 -6.20689611571979 1.333757362488411 1.0435008637077285 0.7231943248597842 0.9286597866317878 0.036999812501516426 0.09737091052551676 0.3518159280524402 0.016857407469317638 0.015924523881884953 6.210175653538301e-07 6.20689611571979 -0.32030653884794436 LDS(ph)PDPFKLNDPFQPFPGNDSPK ddPTM_KYSE-520_SHP099_60min_R1 6 LDSPDPFKLNDPFQPFPGNDSPK 23 1 P42566;B1AUU8;P42566-2 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 LDS(0.999)PDPFKLNDPFQPFPGNDS(0.001)PK;LDS(1)PDPFKLNDPFQPFPGNDSPK;LDS(1)PDPFKLNDPFQPFPGNDSPK;LDS(1)PDPFKLNDPFQPFPGNDSPK;LDS(1)PDPFKLNDPFQPFPGNDSPK;LDS(1)PDPFKLNDPFQPFPGNDSPK 180.42 2.2059000000000004e-11 509046000.0 763832.0 653654.0 595254.0 573903.0 636576.0 766871.0 697222.0 789836.0 1055872.0 848424.0 True False 721460.7162986579 622251.4806853429 633625.0252800747 628446.568569771 686670.9095780152 762084.6736326461 767704.0039909844 787096.2432651082 864152.261167071 840907.6234238835 0.8579547814789938 0.739976025133119 0.7535013450112081 0.7473431695278907 0.8165830472342848 0.9062644366686822 0.9129468952429765 0.9360079767862325 1.0276423201499154 1.0 19.681587798641203 -6.61201929329059 0.9699212941222517 0.9967825667655583 0.7674065125357389 0.8444647507734877 0.038999475875908934 0.2093843523052406 0.40000894440594137 0.027772174030150688 0.01812055547045082 2.443322007062965e-07 6.61201929329059 -0.22937605422981944 LDS(ph)PPPS(ph)PITEASEAAEAAEAGNLAVSSR ddPTM_KYSE-520_SHP099_60min_R1 15 LDSPPPSPITEASEAAEAAEAGNLAVSSR 29 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 LDS(0.934)PPPS(0.567)PIT(0.44)EAS(0.059)EAAEAAEAGNLAVSSR;LDS(0.999)PPPS(0.917)PIT(0.083)EASEAAEAAEAGNLAVSSR;LDS(0.976)PPPS(0.864)PIT(0.154)EAS(0.006)EAAEAAEAGNLAVSSR;LDS(0.991)PPPS(0.949)PIT(0.058)EAS(0.002)EAAEAAEAGNLAVSSR;LDS(0.985)PPPS(0.923)PIT(0.089)EAS(0.003)EAAEAAEAGNLAVSSR;LDS(0.966)PPPS(0.903)PIT(0.124)EAS(0.006)EAAEAAEAGNLAVSSR;LDS(1)PPPS(0.995)PIT(0.005)EASEAAEAAEAGNLAVSSR;LDS(0.906)PPPS(0.636)PIT(0.444)EAS(0.014)EAAEAAEAGNLAVSSR;LDS(0.798)PPPS(0.809)PIT(0.352)EAS(0.041)EAAEAAEAGNLAVSSR;LDS(0.969)PPPS(0.511)PIT(0.511)EAS(0.01)EAAEAAEAGNLAVSSR;LDS(0.977)PPPS(0.676)PIT(0.346)EAS(0.001)EAAEAAEAGNLAVSSR;LDS(0.998)PPPS(0.97)PIT(0.03)EAS(0.003)EAAEAAEAGNLAVSSR;LDS(0.874)PPPS(0.842)PIT(0.23)EAS(0.054)EAAEAAEAGNLAVSSR;LDS(0.999)PPPS(0.984)PIT(0.015)EAS(0.002)EAAEAAEAGNLAVSSR;LDS(0.999)PPPS(0.973)PIT(0.028)EASEAAEAAEAGNLAVSSR 301.78 5.6826e-53 1597340000.0 447097.2 460099.0 410191.19999999995 391739.19999999995 449574.4 497670.2 459874.7 554467.6 726341.1 579277.5 True False 422295.82704982784 437995.15341732145 436632.7810811253 428969.975787315 484953.3475515739 494564.0556804132 506363.32262055995 552544.2813093101 594455.8658090926 574145.5520210752 0.7355205061909573 0.7628643152864554 0.7604914460176778 0.7471449953365985 0.8446522764906358 0.8613914258143712 0.8819424287762712 0.962376664530927 1.035374851754093 1.0 19.13105699628508 -6.74795862005201 0.7140178530780563 1.0251779349419399 0.7443368431331352 0.9457017442510008 0.02434117213354246 0.15029823207051626 0.1523150914433043 0.021275881408660987 0.013872234226196382 1.7866578010186984e-07 6.74795862005201 -0.2808410918088047 LDS(ph)PTMSR ddPTM_KYSE-520_SHP099_60min_R1 1 LDSPTMSR 8 0 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 LDS(0.777)PT(0.222)MSR 93.195 0.0080215 231530000.0 573130.0 562120.0 516890.0 691390.0 680260.0 667280.0 611100.0 827410.0 926140.0 583360.0 True False 541337.3363936706 535114.911440678 550209.5564532412 757099.4977260171 733792.5918500554 663115.2580050514 672875.9517612609 824539.9078289453 757976.3220894873 578191.884247212 0.9362589672085682 0.9254970988348984 0.9516037347525157 1.3094260198960375 1.2691160354238296 1.1468774918354432 1.163758900969917 1.4260662079379942 1.3109425136195905 1.0 19.14118883309876 -5.2518329317560974 23.761731661225678 1.2451825057004104 0.936557574930009 0.6043419618106278 0.10885783874654205 225.41547126271692 557566.2758363421 0.029809454340011282 0.050701575595193345 5.599729754252638e-06 5.2518329317560974 -0.30862493077040143 LDS(ph)SLPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 LDSSLPPVR 9 0 Q9Y4R8;H3BRS3 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog 1 LDS(0.5)S(0.5)LPPVR 60.298 0.035692 278980000.0 218960.0 204330.0 183790.0 151960.0 171210.0 195960.0 170510.0 201840.0 237900.0 181100.0 True False 206813.85231406146 194513.68009441736 195637.39747439747 166402.23271156003 184683.2529483551 194736.94095232873 187746.81481723554 201139.86414980996 194703.3569709648 179495.59489366805 1.1521945841432852 1.0836682661189871 1.0899286837111055 0.9270546879444901 1.0289013112425416 1.0849120897239264 1.0459689271397188 1.1205838464668942 1.084724987743046 1.0 17.453588912897157 -4.411422479533686 1.930103150522945 1.0481010785816751 1.1636942136094781 0.28263544371676574 0.051703134722080026 0.8313301367404442 4.172087338796857 0.015118977582409645 0.15401731294651858 3.877729588254041e-05 4.411422479533686 0.115593135027803 LDS(ph)SPS(ph)VSSTLAAK ddPTM_KYSE-520_SHP099_60min_R1 3 LDSSPSVSSTLAAK 14 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 2 LDS(0.751)S(0.595)PS(0.654)VSSTLAAK;LDS(0.985)S(0.302)PS(0.699)VS(0.013)S(0.001)TLAAK;LDS(0.963)S(0.493)PS(0.544)VSSTLAAK 221.73 1.9788e-14 375800000.0 1844620.0 1568990.0 1417930.0 1653760.0 1596570.0 1563270.0 1600960.0 1896970.0 1908240.0 1532120.0 True False 1742295.251441194 1493613.3652979953 1509332.0365682128 1810932.8531789242 1722210.9757593328 1553513.052064437 1762800.660663899 1890389.8538261247 1561751.718815779 1518546.6087713232 1.1473439414881765 0.9835808507099418 0.993931979334789 1.1925434772424763 1.134117955821453 1.0230262562183756 1.1608472538687535 1.244867851211801 1.0284516193279136 1.0 20.534259759167252 -5.249070250868424 24.972293406927534 1.121434275105335 1.0358151178075996 0.11839030615380786 0.08485524212999297 1371.9308410788078 2769816.9108831766 0.022744998419650476 0.039038129429282774 5.635464899601162e-06 5.249070250868424 -0.0856191572977354 LDS(ph)SPSVSSTLAAKDDPDGK ddPTM_KYSE-520_SHP099_60min_R1 3 LDSSPSVSSTLAAKDDPDGK 20 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.454)S(0.388)PS(0.064)VS(0.064)S(0.015)T(0.015)LAAKDDPDGK;LDS(0.478)S(0.478)PS(0.019)VS(0.019)S(0.005)T(0.001)LAAKDDPDGK;LDS(0.323)S(0.27)PS(0.172)VS(0.172)S(0.052)T(0.011)LAAKDDPDGK 80.702 0.001983 1166210000.0 2369760.0 2655480.0 2149850.0 1776360.0 1930640.0 1830800.0 1630180.0 1713550.0 2795310.0 1721280.0 True False 2238304.68880056 2527906.7548432606 2288432.7708816184 1945184.720317893 2082570.384161045 1819373.2980992207 1794974.5034236182 1707606.0949955755 2287752.168030716 1706030.7983355778 1.3119954756879384 1.48174743229109 1.3413783462257765 1.1401814798511472 1.2207108958365953 1.0664363737596185 1.052134876565426 1.0009233694148632 1.3409794068563545 1.0 20.70221226064916 -5.2708061689415455 2.0615229526047063 1.1074891521490773 1.4057214539215648 0.5677462611374261 0.10497567064499523 0.2302394884094933 1.9072524206470791 0.031422691014816685 0.06101125640464277 5.360358436340404e-06 5.2708061689415455 0.2982323017724875 LDS(ph)SPVSSPR ddPTM_KYSE-520_SHP099_60min_R1 2 LDSSPVSSPR 10 0 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 LDS(0.612)S(0.386)PVS(0.002)SPR;LDS(0.58)S(0.247)PVS(0.14)S(0.034)PR 88.98700000000001 0.0038316 645400000.0 1635860.0 1598120.0 1351230.0 1223980.0 1426580.0 1525670.0 1494900.0 1599730.0 1785020.0 1525080.0 True False 1545115.5847939395 1521343.9163729756 1438332.4478444424 1340306.6911969946 1538843.7298701263 1516147.7276114488 1646019.0808180473 1594180.9100097886 1460905.364692355 1511568.9776942842 1.022193236031363 1.0064667499948312 0.9515493299144342 0.8866989935460772 1.018044001020348 1.0030291372638178 1.0889473818977486 1.0546531012044975 0.9664827647632658 1.0 20.52761538454972 -5.971427244415796 24.999550657019455 1.028000645639432 0.9664677287030964 0.2552970735685045 0.045725030022003496 290.45111514127115 254127.07567743026 0.01507844307754418 0.017097067253325656 1.0680036958587859e-06 5.971427244415796 -0.06153291693633556 LDS(ph)SYFK ddPTM_KYSE-520_SHP099_60min_R1 1 LDSSYFK 7 0 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 LDS(0.963)S(0.036)YFK 70.439 0.054289 0.0 202750.0 216370.0 217470.0 224690.0 210420.0 198850.0 212590.0 254970.0 258500.0 277870.0 True False 191503.05332789512 205975.26042200855 231488.46416430263 246044.47004448823 226978.85687397257 197608.9033903377 234080.6718784594 254085.56858044543 211562.91625470505 275408.28797958855 0.6953423759784892 0.7478905661592656 0.8405283147523107 0.8933807760452126 0.8241540533841696 0.717512551419597 0.8499405504303774 0.9225777860369858 0.7681791924518434 1.0 18.071212450202847 -13.999999999999561 0.08748450707275054 1.5784600127352149 0.6556991108985808 0.46511099796451205 0.06671693247221622 221.94063819851948 1.353240579961185 24.471508797674087 1.8398688831657888 1.0000000000010102e-14 13.999999999999561 -0.9227609018366341 LDS(ph)TPLK ddPTM_KYSE-520_SHP099_60min_R1 2 LDSTPLK 7 0 B7ZBC9;B7ZBC8;O75449;O75449-2 B7ZBC9 KATNA1 Katanin p60 ATPase-containing subunit A1 1 LDS(0.5)T(0.5)PLK;LDS(0.5)T(0.5)PLK 138.26 0.001731 749630000.0 3539600.0 3549600.0 2601100.0 2420900.0 2622900.0 3522200.0 2756800.0 3423800.0 3845600.0 3690500.0 True False 3343251.3319823383 3379071.887941774 2768771.0679071504 2650981.608129872 2829307.3077404397 3500216.6433062516 3035484.24777523 3411923.636920926 3147335.9796870193 3657805.04116555 0.9140047909488965 0.9237977010565445 0.7569487812354506 0.7247465565538025 0.773498662694961 0.9569172232839717 0.8298649637182361 0.9327789749651955 0.8604438848616517 1.0 21.80254675167183 -6.2582877202561775 24.993617835106914 0.9064161923561412 0.8158045844306524 0.2975032824695526 0.07404592013528931 429.1606872214835 3403381.2006081166 0.02682316258315728 0.025747998526529023 5.517118088999095e-07 6.2582877202561775 -0.09061160792548884 LDSDAGFHS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 2 LDSDAGFHSLPR 12 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 LDSDAGFHS(1)LPR;LDSDAGFHS(1)LPR 196.95 3.4348e-08 648490000.0 624970.0 576560.0 635510.0 756910.0 497780.0 600200.0 469300.0 452210.0 602940.0 461310.0 True False 590301.6682531917 548861.1921657963 676475.9914519516 828846.4988267113 536952.4540192292 596453.9291671141 516741.42392662406 450641.3890566078 493461.29488050996 457223.1522937497 1.2910581305689084 1.2004230087919354 1.4795313580650433 1.8127833086943217 1.1743772189258173 1.3045138378817562 1.13017335481436 0.9856049213515913 1.0792570157590764 1.0 18.80253893322474 -6.658312334919632 1.462084142194299 1.0205734521599967 1.4141146642370246 0.49853060484673906 0.1672754176038214 0.3730564516504696 1.6270036186566237 0.10009483230689074 0.06507400076828827 2.1962797891593128e-07 6.658312334919632 0.39354121207702786 LDSEDKDKEGKPLLK ddPTM_KYSE-520_SHP099_60min_R1 2 LDSEDKDKEGKPLLK 15 3 P13639 P13639 EEF2 Elongation factor 2 0 ; 105.31 0.00033522 14296100000.0 11095600.0 12156300.0 8870900.0 5113800.0 8487500.0 7319500.0 4740900.0 5684900.0 9495800.0 5335600.0 False True 10480104.949469773 11572293.101021705 9442732.407941831 5599814.01447996 9155417.962730946 7273816.285469336 5220156.438725185 5665180.408765637 7771602.089638017 5288330.73503398 1.98174158814264 2.1882695468265467 1.785579019365391 1.0589001132970892 1.7312491259441092 1.3754465539157696 0.9871085414803662 1.071260609937861 1.4695756523231298 1.0 22.334380975911166 -5.067485046892262 3.9392338155554443 1.2619683011274034 2.0745638558138504 0.6970154737597003 0.229368808301944 0.1270630929945311 3.829542223048088 0.06537739621378308 0.12532140842858588 8.560811867753361e-06 5.067485046892262 0.812595554686447 LDSPPPS(ph)PITEAS(ph)EAAEAAEAGNLAVSSR ddPTM_KYSE-520_SHP099_60min_R1 1 LDSPPPSPITEASEAAEAAEAGNLAVSSR 29 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 LDS(0.431)PPPS(0.527)PIT(0.239)EAS(0.803)EAAEAAEAGNLAVSSR 125.91 2.6949999999999997e-07 25854000.0 22524.0 24408.0 24178.0 14924.0 16293.0 26186.0 22051.0 28096.0 33791.0 24376.0 True False 21274.54881951918 23235.403042845075 25736.552566167786 16342.372472935787 17575.166405511074 26022.5634607965 24280.13027702107 27998.541533655694 27655.406201790098 24160.047604241026 0.8805673386084168 0.9617283634311367 1.0652525602495098 0.6764213688911386 0.7274475072816475 1.077090736204863 1.00497029951046 1.158877746943713 1.144675153576084 1.0 14.560335676858749 -6.322920422958595 11.970137560162634 1.0826566065829641 0.8687832641688409 0.4754393498367808 0.11265449577296854 1.2297227379964004 237.90311655369345 0.04345550001648052 0.0383225315439739 4.754223309791506e-07 6.322920422958595 -0.21387334241412326 LDSPPPSPIT(ph)EAS(ph)EAAEAAEAGNLAVSSR ddPTM_KYSE-520_SHP099_60min_R1 1 LDSPPPSPITEASEAAEAAEAGNLAVSSR 29 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 LDS(0.449)PPPS(0.502)PIT(0.536)EAS(0.513)EAAEAAEAGNLAVSSR 82.51700000000001 0.0037126 71739000.0 33464.0 38766.0 31513.0 32465.0 26660.0 34910.0 39324.0 45135.0 45654.0 31844.0 True False 31607.685211169846 36903.62317104768 33544.378402582726 35550.46383904185 28757.990325349867 34692.11374079303 43299.25368525585 44978.437219588195 37364.384443684 31561.886934257112 1.0014510627012931 1.1692464157139058 1.0628128309455993 1.1263732080750708 0.9111619462186239 1.0991774291903436 1.37188418979662 1.4250870777554439 1.1838450762311326 1.0 14.9458958393152 -6.64520147064596 6.361407440392647 1.2794848809762405 1.0596308034633295 0.32700352381468656 0.12617492332945332 0.21281324600075205 11.028763345297449 0.047375428865232924 0.03643842280961257 2.2635939752568694e-07 6.64520147064596 -0.21985407751291097 LDSQEPGRQT(ph)PDR ddPTM_KYSE-520_SHP099_60min_R1 3 LDSQEPGRQTPDR 13 1 Q8TB03-2;Q8TB03 Q8TB03-2 CXorf38 Uncharacterized protein CXorf38 1 LDSQEPGRQT(1)PDR;LDS(0.001)QEPGRQT(0.999)PDR;LDSQEPGRQT(1)PDR 108.38 0.0010193 2860280000.0 2569550.0 2596490.0 2278230.0 2018500.0 2230820.0 2342470.0 2147100.0 2302490.0 2711690.0 2280170.0 True False 2427011.939229069 2471750.722989055 2425088.3510968816 2210337.633115848 2406372.842370478 2327849.7758348733 2364149.8216766566 2294503.199595206 2219315.452142056 2259969.4677454173 1.0739135965630084 1.0937097860241953 1.0730624398727784 0.9780387145322442 1.064781129442034 1.03003594033382 1.0460981245181031 1.0152806187617394 0.9820112544954342 1.0 21.107871851243477 -1.000000001966563 0.19823953619110954 0.9915706168100948 1.4678837715971922 0.4843578671682143 0.02790932421141577 47.240927161197945 0.5670214360700785 0.05392088779144512 6.973908862147692 0.09999999954718215 1.000000001966563 0.47631315478709735 LDSQPQET(ph)SPELPR ddPTM_KYSE-520_SHP099_60min_R1 1 LDSQPQETSPELPR 14 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 LDSQPQET(0.64)S(0.36)PELPR 123.02 0.00039831 2960900000.0 1915900.0 2003000.0 1608400.0 1246200.0 1180900.0 1880900.0 1331100.0 1767400.0 2212600.0 1716900.0 True False 1809621.2077480387 1906772.873435707 1712080.0375309906 1364638.4733163074 1273830.1115981103 1869160.6054155726 1465660.5782841025 1761269.3019142598 1810847.615107004 1701689.6017279886 1.0634261418242494 1.120517438373876 1.006105952455989 0.8019314873467988 0.748567841223566 1.0984145425332121 0.8612972523283863 1.0350120845339659 1.064146841626211 1.0 20.698536474217114 -4.9862029441090066 7.401341959866955 0.9376877947660619 1.0859517279513748 0.2270342224305466 0.10813441875990767 0.21960149284410402 64.41151353975279 0.029966491728432073 0.06074723051105602 1.0322789131470305e-05 4.9862029441090066 0.14826393318531295 LDSQPQETS(ph)PELPR ddPTM_KYSE-520_SHP099_60min_R1 7 LDSQPQETSPELPR 14 0 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 LDSQPQET(0.001)S(0.999)PELPR;LDSQPQET(0.187)S(0.813)PELPR;LDSQPQET(0.041)S(0.959)PELPR;LDSQPQET(0.007)S(0.993)PELPR;LDSQPQET(0.002)S(0.998)PELPR;LDSQPQET(0.052)S(0.948)PELPR;LDSQPQET(0.025)S(0.975)PELPR 284.86 1.181e-32 16736570000.0 9686830.0 10636900.0 8366690.0 6896680.0 7503480.0 9227210.0 7758690.0 9220570.0 11708280.0 8929830.0 True False 9149482.22968315 10125887.357687604 8906020.224577328 7552138.393637554 8093961.18703887 9169619.55973024 8543014.102717357 9188585.994767224 9582351.49372008 8850718.65350261 1.0337558550753736 1.1440751597815568 1.006248257711009 0.8532796814921745 0.9144976248720482 1.0360310748440102 0.9652339473401427 1.0381740008344866 1.0826636648231873 1.0 23.077363172062256 -9.881738642227752 13.97679208364723 1.0000048805691477 1.005276986682278 0.0 0.07812884610682319 0.0 0.0 0.08338101225574282 0.02022286592360873 1.3129898166254492e-10 9.881738642227752 0.005272106113130226 LDSS(ph)IISEGK ddPTM_KYSE-520_SHP099_60min_R1 1 LDSSIISEGK 10 0 G5EA36;P30260;P30260-2;I3L328 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 LDS(0.451)S(0.548)IISEGK 172.51 3.8316e-05 304280000.0 722050.0 696280.0 569100.0 572060.0 609010.0 668720.0 617010.0 701080.0 758260.0 777490.0 True False 681996.447129011 662829.6636624122 605785.0965921946 626428.410403889 656935.6222071014 664546.2704309109 679383.392237302 698648.1171133029 620579.0981790827 770602.0434780676 0.8850176986955026 0.8601452192765658 0.786119244971138 0.8129077981373378 0.8524966002452584 0.862372836998355 0.8816267721935235 0.9066263488739209 0.805317223632233 1.0 19.55562648616976 -13.999999997052466 0.2556285036170899 1.938674074415724 0.8380897276387039 0.5938594595428505 0.0367860401671361 136.89851927131352 1.3526230473262408 67.29917641121493 0.05347540758258481 1.0000000067869473e-14 13.999999997052466 -1.10058434677702 LDSS(ph)PSVSSTLAAK ddPTM_KYSE-520_SHP099_60min_R1 13 LDSSPSVSSTLAAK 14 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.007)S(0.993)PSVSSTLAAK;LDS(0.009)S(0.989)PS(0.002)VSSTLAAK;LDS(0.077)S(0.919)PS(0.004)VSSTLAAK;LDS(0.066)S(0.931)PS(0.002)VSSTLAAK;LDS(0.103)S(0.897)PSVSSTLAAK;LDS(0.011)S(0.989)PSVSSTLAAK;LDS(0.035)S(0.871)PS(0.094)VSSTLAAK;LDS(0.005)S(0.915)PS(0.08)VSSTLAAK;LDS(0.04)S(0.96)PSVSSTLAAK;LDS(0.017)S(0.912)PS(0.071)VSSTLAAK;LDS(0.025)S(0.95)PS(0.025)VSSTLAAK;LDS(0.017)S(0.89)PS(0.092)VSSTLAAK;LDS(0.032)S(0.638)PS(0.299)VS(0.023)S(0.006)T(0.002)LAAK 304.37 8.817099999999999e-34 73931950000.0 78755700.0 79400000.0 62195640.0 53890710.0 56449860.0 77440400.0 65386670.0 78408100.0 87587300.0 77224100.0 True False 74386964.32540424 75585504.81817023 66204870.47094244 59012466.875567265 60892142.82623228 76957065.73854211 71996592.71600303 78136120.60168812 71683654.21615376 76539954.55344068 0.9718710281369033 0.9875300457017643 0.8649713846474495 0.7710021154293264 0.7955602166410617 1.0054495875720726 0.9406406514879044 1.020854023987341 0.9365520875257873 1.0 26.1897097085999 -6.283294252868328 24.577479774064695 0.979498989563359 0.8775726529731107 0.36656317917765324 0.06736713015723854 847.6775094663833 953275.0356667361 0.026841256248352353 0.023693136858282515 5.208416992620807e-07 6.283294252868328 -0.1019263365902483 LDSS(ph)PSVSSTLAAKDDPDGK ddPTM_KYSE-520_SHP099_60min_R1 3 LDSSPSVSSTLAAKDDPDGK 20 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LDS(0.208)S(0.751)PS(0.017)VS(0.017)S(0.004)T(0.001)LAAKDDPDGK;LDS(0.122)S(0.388)PS(0.122)VS(0.122)S(0.122)T(0.122)LAAKDDPDGK;LDS(0.083)S(0.87)PS(0.018)VS(0.018)S(0.005)T(0.005)LAAKDDPDGK 75.91 0.0064822000000000005 593060000.0 2285130.0 2392900.0 2401660.0 1793100.0 1725110.0 1761940.0 1552730.0 1690080.0 2800860.0 1748670.0 True False 2158369.2836062824 2277941.492183872 2556474.8463918674 1963515.6848848267 1860866.3424667765 1750943.0789015407 1709695.1015844608 1684217.5069476354 2292294.427934832 1733178.1442446744 1.2453245448389312 1.3143146881630035 1.4750213963181429 1.1328989414071653 1.0736728642962141 1.0102499184609834 0.9864508776906787 0.9717509492837644 1.3225959694603826 1.0 20.724988518461416 -5.44503952507731 5.066130212090702 1.056588204788152 1.3406755014110576 0.5800054070941412 0.10807030733954869 0.1549453712000122 7.066883611733014 0.031044568607283548 0.046083330236885205 3.5888927069859574e-06 5.44503952507731 0.28408729662290555 LDSS(ph)PSVSSTLAAKDDPDGKQEAKPQQAAGMLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 LDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPK 35 3 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 2 LDS(0.469)S(0.53)PSVSSTLAAKDDPDGKQEAKPQQAAGMLS(1)PK 141.1 3.1043e-06 272470000.0 227890.0 282560.0 274900.0 168360.0 220570.0 164030.0 114450.0 135510.0 316780.0 162440.0 True False 215248.4874125479 268985.393468793 292620.4938555519 184360.88378072012 237927.6041283725 163006.22792616073 126019.72292435996 135039.94743827166 259260.73737394775 161000.90797640773 1.3369395869748097 1.6707073074905192 1.8175083453469159 1.145092199155395 1.4778028715418003 1.0124553331714554 0.782726784018052 0.838752707270817 1.6103060574784989 1.0 17.296709298983952 -5.8531371501410305 1.4360014362610465 1.0309525980128957 1.5842572035265228 0.39105239494979116 0.27055090139539684 0.40005160326256906 1.71803046702099 0.10729434538022739 0.13670735709850998 1.4023707661197206e-06 5.8531371501410305 0.553304605513627 LDSSLPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 LDSSLPPVR 9 0 Q9Y4R8;H3BRS3 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog 0 82.671 0.058870000000000006 1205800000.0 97718.0 91287.0 72767.0 84516.0 69845.0 83550.0 82057.0 89636.0 99418.0 97174.0 False True 92297.38774399638 86901.43549541957 77457.67725131658 92548.37522933794 75341.4041363113 83028.53345870103 90352.1223591454 89325.0736371996 81366.19732383084 96313.11396022796 0.9583055094876296 0.9022804052551463 0.8042277325110925 0.9609114628725985 0.7822548876098345 0.8620688299309611 0.938108204002789 0.927444560395856 0.8448091228514387 1.0 16.555444627849713 -10.45946164104809 6.145519364993575 1.0000544033920407 0.8858390655097244 0.24664695121830282 0.059379474504061905 4.365332607500747e-05 3.839628103621526e-06 0.05670406758603976 0.01374621388604503 3.4716693796686685e-11 10.45946164104809 -0.1142153378823163 LDST(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 1 LDSTPLK 7 0 B7ZBC9;B7ZBC8;O75449;O75449-2 B7ZBC9 KATNA1 Katanin p60 ATPase-containing subunit A1 1 LDS(0.126)T(0.874)PLK 126.82 0.010442 389850000.0 2068700.0 2096000.0 1631500.0 1544300.0 1644700.0 2132300.0 1725600.0 2113800.0 2310000.0 2144100.0 True False 1953945.0871487882 1995305.0138398614 1736669.100492295 1691069.8076892747 1774128.532937093 2118991.5247634766 1900040.4882330773 2106467.721164629 1890562.2303611948 2125104.942084559 0.9194581634317426 0.938920697197488 0.8172156894937909 0.7957582584276849 0.8348427871975179 0.9971232397986495 0.8940925460223573 0.991229976199835 0.889632409638417 1.0 21.01910265560355 -6.252666246146432 24.985676098292434 0.9500973154862589 0.8594711887236107 0.4222543397156019 0.05435829134121205 703.9944043074626 2004960.750097913 0.01897342569337253 0.018705074995341395 5.58899542164368e-07 6.252666246146432 -0.09062612676264814 LDT(ph)PDINIVLK ddPTM_KYSE-520_SHP099_60min_R1 6 LDTPDINIVLK 11 0 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 LDT(1)PDINIVLK;LDT(1)PDINIVLK;LDT(1)PDINIVLK;LDT(1)PDINIVLK;LDT(1)PDINIVLK;LDT(1)PDINIVLK 199.31 1.8577e-06 806414000.0 1989400.0 2528670.0 1906520.0 1623850.0 1759440.0 2281300.0 1790300.0 2290620.0 2728200.0 2368010.0 True False 1879044.0162294207 2407188.8975889473 2029417.3297398537 1778180.215771696 1897897.9181557952 2267061.56049473 1971280.9956442236 2282674.373854724 2232827.652325289 2347031.2736839023 0.8006045924049711 1.0256313686909768 0.8646741747733419 0.7576295363890327 0.8086376774932585 0.9659272911759492 0.8399040173632195 0.9725794451267948 0.9513412443033367 1.0 21.162405634912602 -7.272140904544048 23.486249684269126 0.9714702921743424 0.8696740781837776 0.30234870627092425 0.07534519508169905 465.70008992993587 1022043.0519557892 0.04217814331422777 0.020629925350724717 5.343909509545809e-08 7.272140904544048 -0.10179621399056482 LDTGPQS(ph)LSGK ddPTM_KYSE-520_SHP099_60min_R1 3 LDTGPQSLSGK 11 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 LDTGPQS(0.774)LS(0.225)GK;LDT(0.333)GPQS(0.334)LS(0.334)GK;LDT(0.043)GPQS(0.478)LS(0.478)GK 166.77 1.5747e-05 3858700000.0 5511300.0 4302100.0 4126440.0 3851050.0 3840440.0 3894080.0 3880730.0 4219800.0 4627800.0 3845380.0 True False 5205577.202495825 4095420.658416245 4392436.924937445 4217052.634139602 4142660.7788854674 3869775.602284365 4273032.0606749775 4205162.498708728 3787508.1773443855 3811312.924860365 1.365822566953497 1.0745432713495413 1.152473441969704 1.10645667707647 1.0869379818864497 1.0153392488563877 1.1211443785691064 1.103336981668277 0.9937541870779735 1.0 21.861856633682738 -1.5761943939842233 1.170903465152156 1.0712330195213084 199.9999996813504 0.7357957872919044 0.052204096316159895 551.711121072948 1.4563076992470312 0.015326150837599339 293932.36789716064 0.026534176033469758 1.5761943939842233 198.9287666618291 LDTGPQSLS(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 3 LDTGPQSLSGK 11 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 LDT(0.001)GPQS(0.499)LS(0.5)GK;LDTGPQS(0.295)LS(0.704)GK;LDTGPQS(0.231)LS(0.769)GK 174.95 8.465800000000001e-06 3952200000.0 5942900.0 5046100.0 4236000.0 4232300.0 4104900.0 4134100.0 4113000.0 4574600.0 5113100.0 4101800.0 True False 5613235.49012256 4803677.78164948 4509059.337839639 4634536.519512607 4427932.276313899 4108297.5484334705 4528782.179011724 4558731.780319662 4184689.930761829 4065461.243152107 1.380713073966093 1.1815824808909026 1.1091138417405237 1.1399780350431465 1.0891586492854508 1.010536640917071 1.1139651587233892 1.1213319984290646 1.029327222786972 1.0 21.954987610544208 -1.0000000008149055 0.7060539007365837 1.0684188510090258 41.9758093259605 0.8355915483015397 0.04210199181766896 114.59342540917118 0.5926064144226281 0.016453288637479975 7407.565517666143 0.09999999981236107 1.0000000008149055 40.90739047495147 LDVFARPAS(ph)PSLQLLPWR ddPTM_KYSE-520_SHP099_60min_R1 6 LDVFARPASPSLQLLPWR 18 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 LDVFARPAS(0.942)PS(0.058)LQLLPWR;LDVFARPAS(0.973)PS(0.027)LQLLPWR;LDVFARPAS(0.794)PS(0.206)LQLLPWR;LDVFARPAS(0.984)PS(0.016)LQLLPWR;LDVFARPAS(0.998)PS(0.002)LQLLPWR;LDVFARPAS(0.985)PS(0.015)LQLLPWR 234.3 1.1960000000000001e-23 1829135000.0 786305.0 1247988.0 1444298.0 757740.0 954060.0 885348.0 492062.0 522886.0 1140235.0 479022.0 True False 742687.0941898426 1188032.7832118217 1537399.7600385079 829755.3817771621 1029139.0941411587 879822.2147288346 541804.4290223366 521072.2305085101 933197.0669852365 474778.2377534772 1.5642820903166035 2.502289887660549 3.238142858680865 1.7476693660251599 2.1676206117002494 1.8531224575328398 1.141173680550333 1.0975065600607214 1.965543053112278 1.0 18.856894282616555 -6.350409932990512 1.49707219925239 1.3051002376801193 2.350278790657836 0.4419971487952966 0.49239414582781105 0.3777530121057465 1.694845859008438 0.23474535177402384 0.1982362329071578 4.46262163935509e-07 6.350409932990512 1.0451785529777167 LDVTILS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 11 LDVTILSPSR 10 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 1 LDVT(0.005)ILS(0.97)PS(0.026)R;LDVT(0.001)ILS(0.986)PS(0.013)R;LDVT(0.001)ILS(0.998)PS(0.001)R;LDVTILS(0.966)PS(0.034)R;LDVTILS(0.993)PS(0.007)R;LDVTILS(1)PSR;LDVTILS(0.989)PS(0.011)R;LDVTILS(0.999)PS(0.001)R;LDVTILS(0.98)PS(0.02)R;LDVTILS(0.5)PS(0.5)R;LDVTILS(0.581)PS(0.419)R 246.56 7.9441e-14 12540360000.0 5019536.0 5352975.0 4432490.0 3520890.0 3922935.0 4718937.0 3687785.0 4489621.0 5201168.0 4949741.0 True False 4741092.331883058 5095810.046020715 4718215.397634751 3855514.3270058185 4231647.666053126 4689484.363782194 4060582.297113242 4474047.552636422 4256767.001975449 4905890.145580231 0.9664081728683547 1.0387126280460202 0.9617450162200313 0.7858949574073305 0.8625647008964239 0.9558885797732346 0.8276953165719506 0.9119746712361955 0.8676849410927833 1.0 22.226083498245973 -5.012612874854172 23.408973485416077 0.882341248366978 1.0019775544610268 0.38800985132887855 0.05969887951772407 225.84544648353142 419165.6860937506 0.015247300804607808 0.028256676536254816 9.713754544420809e-06 5.012612874854172 0.11963630609404874 LDVTILS(ph)PSRK ddPTM_KYSE-520_SHP099_60min_R1 6 LDVTILSPSRK 11 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 1 LDVTILS(1)PSRK;LDVTILS(0.86)PS(0.14)RK;LDVTILS(0.774)PS(0.226)RK;LDVTILS(1)PSRK;LDVTILS(0.985)PS(0.015)RK;LDVTILS(1)PSRK 191.06 5.0688e-07 8719150000.0 4181810.0 4020500.0 3875820.0 3205250.0 3463600.0 3593350.0 3450060.0 3659810.0 4663950.0 3744040.0 True False 3949836.6630684407 3827349.145106463 4125661.5587312663 3509875.9963064496 3736165.61481177 3570922.5697644986 3798825.7341408217 3647114.9733160716 3817094.2486117277 3710870.718419044 1.0643961923715857 1.0313884356329834 1.1117772274451365 0.9458362370009418 1.0068164315903474 0.9622869781046515 1.0237019886694543 0.9828191952938381 1.0286249611621983 1.0 21.823326309743976 -5.261181636025406 24.999893234932387 0.9927450825529212 1.065407398971158 0.574384333511069 0.030052402426377203 16.79556294299238 1629085.186737048 0.00789675929056849 0.012625800126650124 5.480477056726748e-06 5.261181636025406 0.07266231641823695 LDVTILSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 LDVTILSPSR 10 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 1 LDVTILS(0.033)PS(0.966)R;LDVTILS(0.245)PS(0.755)R;LDVTILS(0.064)PS(0.936)R 159.94 7.8142e-05 4178370000.0 1899320.0 2018320.0 1667200.0 1336440.0 1533960.0 1876570.0 1382220.0 1684420.0 2045250.0 1980520.0 True False 1793960.9333994486 1921356.8776399149 1774670.3796143185 1463454.8557846625 1654673.9249615024 1864857.6305517044 1521948.286767223 1678577.1401665835 1673884.1565568096 1962974.1336212426 0.9138994257096995 0.9787988770363707 0.9040722183844846 0.7455293631836706 0.8429422969058711 0.9500164055200587 0.775327733921574 0.85511933724261 0.8527285856125228 1.0 20.904609731663548 -5.004365331067412 24.681908903286516 0.8514614820772229 0.9451207821855484 0.1845683502502884 0.07140817516965867 223.38367122715715 1263062.3104336583 0.01809299650394846 0.03622590645662313 9.899988017163038e-06 5.004365331067412 0.09365930010832546 LDVTILSPS(ph)RK ddPTM_KYSE-520_SHP099_60min_R1 1 LDVTILSPSRK 11 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 1 LDVT(0.063)ILS(0.41)PS(0.527)RK 60.518 0.032560000000000006 676770000.0 1229900.0 1227500.0 1116600.0 929790.0 979960.0 1108200.0 969640.0 993180.0 1356500.0 1042000.0 True False 1161674.995255134 1168529.0574849355 1188577.822623168 1018156.9620484422 1057077.2767903153 1101283.3127340833 1067660.6739744537 989734.8903899554 1110193.7945822342 1032768.6906637336 1.124816239838328 1.1314528297076398 1.1508654681033172 0.9858518865382133 1.023537299635758 1.066340723425995 1.0337848964885796 0.9583316180449646 1.0749684848295908 1.0 19.97808573911286 -5.2553289228232725 24.984919494967713 1.0212683020239899 1.1352856512723373 0.7152880114209478 0.03333431952267157 260.0825683403419 1063443.8590716212 0.009062881474617184 0.015178383104210153 5.554833899091788e-06 5.2553289228232725 0.11401734924834739 LDWES(ph)FKEEEGIGEELAIHNR ddPTM_KYSE-520_SHP099_60min_R1 2 LDWESFKEEEGIGEELAIHNR 21 1 Q9UEE9 Q9UEE9 CFDP1 Craniofacial development protein 1 1 LDWES(1)FKEEEGIGEELAIHNR;LDWES(1)FKEEEGIGEELAIHNR 227.03 1.0941e-19 143160000.0 72706.0 75145.0 56755.0 67472.0 81178.0 51299.0 76698.0 67089.0 88700.0 68379.0 True False 68672.85324418236 71534.92140505547 60413.518111210724 73884.51859380346 87566.24676036208 50978.82391260212 84451.38234034565 66856.28391769032 72594.31594503802 67773.21525805703 1.0132742409032804 1.055504318817916 0.8914069943587136 1.090172840590146 1.2920479931037654 0.7521972171232004 1.2460878832261966 0.9864705940706023 1.0711357823090422 1.0 16.04842759613692 LDYGQHVVAGT(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 LDYGQHVVAGTPGR 14 0 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 1 LDYGQHVVAGT(1)PGR;LDYGQHVVAGT(1)PGR 111.57 0.00021716 854330000.0 446550.0 434450.0 390230.0 354490.0 426240.0 379660.0 348040.0 349680.0 427290.0 374060.0 True False 421778.98132464464 413578.3698772553 415384.85019007634 388180.6230186955 459782.6630261481 377290.40111227386 383223.2797430688 348467.04169592576 349704.9071043442 370746.11941427656 1.1376490790813734 1.1155298686083277 1.120402422138153 1.047025451357287 1.2401550250951674 1.0176516525873185 1.033654189957549 0.939907455394143 0.943246304659441 1.0 18.500072066560875 -6.668913064899444 2.140976059833156 0.9647294997158021 1.125157031946099 0.6459039330787185 0.05306532087227467 0.1922389951120631 1.8002118125704047 0.024055431868183683 0.016694083165467433 2.1433195981819182e-07 6.668913064899444 0.16042753223029693 LDYHEK ddPTM_KYSE-520_SHP099_60min_R1 2 LDYHEK 6 0 A0A0A0MQZ6;O95478 A0A0A0MQZ6 NSA2 Ribosome biogenesis protein NSA2 homolog 0 ; 103.29 0.018828 545690000.0 1980680.0 1740950.0 1236150.0 1080600.0 1854830.0 1878780.0 1342870.0 1564880.0 1628640.0 1581600.0 False True 1870807.7320123108 1657312.1487807753 1315834.2069099296 1183299.8991057642 2000794.5684609402 1867053.8371219453 1478620.4047482328 1559451.7965257373 1332920.030673358 1567588.2544661805 1.1934305623190493 1.0572369013731535 0.8394003994103784 0.7548537670746455 1.276352105063636 1.1910358678706376 0.943245396573704 0.9948095694661773 0.8502998328009701 1.0 20.580115237676196 -6.900244099812917 20.537754208929176 0.9465278368104302 1.041632323530333 0.09762732837302779 0.1543722569111288 11.263577712452026 2288.976492043429 0.07102405495778231 0.04788442541135285 1.2582180182515522e-07 6.900244099812917 0.0951044867199029 LDYILGLK ddPTM_KYSE-520_SHP099_60min_R1 3 LDYILGLK 8 0 P46781;B5MCT8;C9JM19 P46781 RPS9 40S ribosomal protein S9 0 ;; 146.35 0.0037454 349781000.0 812002.0 903039.0 589346.0 540034.0 845818.0 959729.0 666781.0 735197.0 710703.0 647067.0 False True 766958.6303741443 859655.6509508262 627336.1861469402 591358.6689928572 912379.0645538917 953738.9753176032 734185.7306354535 732646.7732032702 581657.2505646716 641334.4897905086 1.1958792838736472 1.3404169971143014 0.9781731625752095 0.9220752640108659 1.4226259137441983 1.487116302803458 1.1447781810007982 1.1423785635520531 0.9069483394767517 1.0 19.290717469187367 -7.597308666354974 3.0842449540361505 0.9537512243479591 1.2143473140705077 0.26513513388578636 0.16914121778647595 0.3920281743012664 7.1563823360822685 0.15175128483765582 0.04930634772193629 2.527500985766743e-08 7.597308666354974 0.26059608972254855 LDYVPS(ph)S(ph)ASR ddPTM_KYSE-520_SHP099_60min_R1 1 LDYVPSSASR 10 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 2 LDY(0.006)VPS(0.992)S(0.618)AS(0.384)R 53.967 0.066238 476670000.0 1183200.0 1110400.0 1133800.0 1162700.0 951170.0 765520.0 939570.0 1287400.0 1096600.0 1197700.0 True False 1117565.537349277 1057054.7172556203 1206886.5621441395 1273202.6584214987 1026021.6675830083 760742.1057247731 1034550.9049195354 1282934.3098814203 897485.0830364011 1187089.3097964986 0.9414334103816164 0.8904593011934628 1.0166771380925288 1.072541592207382 0.8643171656215977 0.6408465643205786 0.8715021661654819 1.0807395023221567 0.7560383836581394 1.0 20.178997048494004 -4.227918761518803 19.245570278197206 0.910187196763009 0.9414345533217181 0.0049398287328582535 0.13234406014475075 6055.1571508699535 3475175.998021204 0.034604348351376456 2.6887395554159665 5.9167230116703454e-05 4.227918761518803 0.03124735655870914 LDYVPS(ph)SASR ddPTM_KYSE-520_SHP099_60min_R1 1 LDYVPSSASR 10 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 LDYVPS(0.49)S(0.49)AS(0.019)R 61.343999999999994 0.06603400000000001 0.0 195850.0 193370.0 176940.0 162510.0 172250.0 179720.0 162400.0 199740.0 223140.0 212620.0 True False 184985.81008270424 184080.21494571236 188345.83551400993 177954.9015395867 185805.0950315648 178598.30081625085 178816.9768712631 199047.14855966633 182623.4009016437 210736.35221585666 0.8778068336934284 0.8735095440826436 0.8937510473802251 0.8444433040072173 0.8816945585223244 0.8474964045752919 0.8485340805752458 0.944531621937647 0.8665965742568376 1.0 17.685079676289526 -8.807868051302956 0.6539665333350634 1.004276150686694 0.8690881800676277 0.6553735684537467 0.027333829716303402 1.8562346725721095 1.0505787223345406 0.04786510893016148 0.01042333185991087 1.5564384417328862e-09 8.807868051302956 -0.1351879706190663 LDYVPSSAS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 10 LDYVPSSASR 10 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 LDYVPS(0.007)S(0.128)AS(0.865)R;LDYVPSS(0.022)AS(0.978)R;LDYVPSS(0.001)AS(0.999)R;LDYVPSSAS(1)R;LDYVPSSAS(1)R;LDYVPSSAS(1)R;LDYVPSSAS(1)R;LDYVPSS(0.001)AS(0.998)R;LDYVPSSAS(1)R;LDYVPSS(0.002)AS(0.998)R 209.43 5.8436999999999996e-09 52621920000.0 22461090.0 22880860.0 20872080.0 19975910.0 20398500.0 18962660.0 18094810.0 19768760.0 22863050.0 19167940.0 True False 21215128.56262714 21781629.140728924 22217527.67330877 21874414.480423633 22003745.89841142 18844307.005098436 19924009.983127464 19700186.78562325 18711696.450588554 18998126.96403168 1.1166957986328236 1.1465145580912859 1.1694588479891854 1.1513984784835631 1.1582060663174925 0.9919034145195226 1.0487354896010914 1.0369541598980123 0.984923223537488 1.0 24.179353853667486 -6.257051965499575 24.983421051454812 1.0170774051046005 1.149677401345966 0.9035332615958087 0.022184175878984226 110.81628724179564 631026.5118351339 0.0075601465051892535 0.007314261594247255 5.532839020779864e-07 6.257051965499575 0.13259999624136554 LEADYDKK ddPTM_KYSE-520_SHP099_60min_R1 2 LEADYDKK 8 1 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 0 ; 80.23899999999999 0.026591000000000004 1557370000.0 6167900.0 5766100.0 4368700.0 3602900.0 6421200.0 6154000.0 4431800.0 5148600.0 5301300.0 5700000.0 False True 5825754.291596177 5489087.900907448 4650313.392167141 3945318.532748614 6926511.908369714 6115590.603289607 4879809.5941999005 5130740.708292271 4338717.554897749 5649502.434532889 1.0311977663707053 0.9716055465973606 0.8231368064808413 0.6983479657664436 1.2260392819783625 1.082500746598095 0.8637591806973656 0.9081756787872753 0.7679822436002688 1.0 22.429692380773815 LEAEEGRNS(ph)LS(ph)PVQATQKPLVSK ddPTM_KYSE-520_SHP099_60min_R1 4 LEAEEGRNSLSPVQATQKPLVSK 23 2 E9PDI4;O00515;A0A0J9YYF6;A0A0J9YVY2;A0A0J9YW63 E9PDI4 LAD1 Ladinin-1 2 LEAEEGRNS(1)LS(0.999)PVQAT(0.001)QKPLVSK;LEAEEGRNS(1)LS(0.958)PVQAT(0.042)QKPLVSK;LEAEEGRNS(1)LS(0.996)PVQAT(0.004)QKPLVSK;LEAEEGRNS(1)LS(1)PVQATQKPLVSK 131.95 1.8863e-05 17157200000.0 12834700.0 11162400.0 11829890.0 11439800.0 11005600.0 10769200.0 10990500.0 11585000.0 13937200.0 11346000.0 True False 12122733.605659863 10626141.548896022 12592463.637893228 12527035.152498728 11871678.106701823 10701985.428168088 12101526.99694345 11544814.338959316 11406555.80822081 11245483.267054427 1.0780091275557264 0.9449252910301442 1.119779678547476 1.1139614772447197 1.0556841199952642 0.9516696769734557 1.076123338549349 1.0266178931395353 1.0143233098428301 1.0 23.42284232550527 -6.029415298813961 24.83123551371135 1.0175720910949746 1.0627735944948795 0.173500309707882 0.053068609668967044 1364.5709302838661 1151914.6186461414 0.018037509159000018 0.01806642811755071 9.345116098623294e-07 6.029415298813961 0.04520150339990492 LEAHSDWVR ddPTM_KYSE-520_SHP099_60min_R1 4 LEAHSDWVR 9 0 A8MXL6;P55735-2;P55735;P55735-4;P55735-3 A8MXL6 SEC13 Protein SEC13 homolog 0 ;;; 195.79 8.5351e-05 1786270000.0 2224610.0 1832130.0 1314190.0 1281840.0 2139290.0 2093550.0 1533060.0 1724320.0 1537970.0 1725290.0 False True 2101206.44864991 1744111.7247168024 1398904.790178347 1403665.6882007502 2307639.9521049405 2080483.377887059 1688036.666023757 1718338.7363793133 1258713.4170686607 1710005.2728553081 1.2287719119961469 1.019945231984311 0.8180704541586025 0.8208545964638795 1.3494928867977831 1.216653194532634 0.9871529011165745 1.0048733554546825 0.7360874478281019 1.0 20.705569343037965 -7.5764902394369695 7.788463857129045 0.8667824052012698 1.0551402726914043 0.16646924424221954 0.17166422542906523 0.49012284287072444 60.85840753756122 0.12569273512856727 0.04706907319202707 2.6516106860353243e-08 7.5764902394369695 0.1883578674901345 LEAIIT(ph)PPPAK ddPTM_KYSE-520_SHP099_60min_R1 6 LEAIITPPPAK 11 0 D6RCF2;O75367-2;O75367-3;O75367 D6RCF2 H2AFY Histone H2A;Core histone macro-H2A.1 1 LEAIIT(1)PPPAK;LEAIIT(1)PPPAK;LEAIIT(1)PPPAK;LEAIIT(1)PPPAK;LEAIIT(1)PPPAK;LEAIIT(1)PPPAK 133.71 0.0005788999999999999 2064159000.0 4400500.0 5028750.0 3827690.0 3586470.0 3727810.0 5351800.0 4146930.0 5739630.0 5392600.0 5777570.0 True False 4156395.4928207276 4787161.301692361 4074429.0219205343 3927327.030488471 4021167.438662506 5318397.431050592 4566142.15453662 5719720.563169712 4413439.776383456 5726385.224681443 0.7258323234884965 0.8359831051985626 0.7115184993770994 0.6858300439797861 0.702217416552901 0.9287529955420443 0.797386479494249 0.9988361485910859 0.770720027245281 1.0 22.449193295729124 -6.26057066354828 24.996761310935177 0.8927068515717508 0.734304208849538 0.5266846714165347 0.07896214477067283 66.23937176109142 1906012.9924992654 0.02577111282267438 0.024364041745455277 5.488192506021537e-07 6.26057066354828 -0.15840264272221283 LEAIIT(ph)PPPAKK ddPTM_KYSE-520_SHP099_60min_R1 2 LEAIITPPPAKK 12 1 D6RCF2;O75367-2;O75367-3;O75367 D6RCF2 H2AFY Histone H2A;Core histone macro-H2A.1 1 LEAIIT(1)PPPAKK;LEAIIT(1)PPPAKK 125.53 0.00017076 1237340000.0 3490000.0 3867800.0 3048220.0 2359580.0 2695090.0 3618700.0 2798330.0 3590800.0 4277100.0 3937300.0 True False 3296402.7428574874 3681985.082313841 3244713.1385244397 2583833.7737664073 2907178.250035523 3596114.3510113913 3081212.505468977 3578344.3528990247 3500486.4569168277 3902418.5851730453 0.8447076270551624 0.9435136190421178 0.8314620965706986 0.6621108723660489 0.7449683283800295 0.9215091288962607 0.7895648399112846 0.9169555430303359 0.8970043526895527 1.0 21.89593710338711 -7.80628924324755 0.9558784070290892 0.9951844013347417 0.8161366854547147 0.34551887563295447 0.0780760804276321 0.6590338838375326 1.3062585257321324 0.08078176622291165 0.02838686897787851 1.562106921674127e-08 7.80628924324755 -0.179047715880027 LEALS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 7 LEALSVK 7 0 P43487-2;P43487;F6WQW2;C9JXG8;Q5T0Z6;Q9C010;Q9C010-2 P43487-2 RANBP1;PKIB Ran-specific GTPase-activating protein;cAMP-dependent protein kinase inhibitor beta 1 LEALS(1)VK;LEALS(1)VK;LEALS(1)VK;LEALS(1)VK;LEALS(1)VK;LEALS(1)VK;LEALS(1)VK 127.4 0.002184 9585420000.0 14630450.0 11414180.0 9694980.0 10703720.0 10651280.0 11360180.0 11962500.0 13607690.0 11370550.0 12444390.0 True False 13818869.773420984 10865825.659766532 10319933.923316449 11720998.330609232 11489475.138506828 11289276.902775196 13171786.242749268 13560488.099448726 9305944.748239608 12334142.386188926 1.1203754051756831 0.8809551016642607 0.8366965128335251 0.9502888781090887 0.9315179587493729 0.915286734115887 1.0679126144593798 1.099426913916041 0.7544865671941552 1.0 23.55615407030712 LEALS(ph)VKEETKEDAEEKQ ddPTM_KYSE-520_SHP099_60min_R1 2 LEALSVKEETKEDAEEKQ 18 3 P43487-2;P43487;F6WQW2 P43487-2 RANBP1 Ran-specific GTPase-activating protein 1 LEALS(0.999)VKEET(0.001)KEDAEEKQ;LEALS(0.999)VKEET(0.001)KEDAEEKQ 103.84 0.0006159 1005490000.0 1490720.0 1291170.0 1356860.0 1111230.0 1135480.0 1024920.0 1060350.0 1233800.0 1506840.0 1194600.0 True False 1408026.789923353 1229140.255114317 1444325.3666527602 1216840.9650965177 1224835.8160025603 1018523.094105231 1167540.5260187408 1229520.2357710858 1233235.8403452216 1184016.7733847378 1.1891949688332875 1.0381105088575604 1.219852116219503 1.0277227421516553 1.0344750543534391 0.8602269131657556 0.986084447673071 1.0384314339198657 1.0415695690017817 1.0 20.17525808838865 -5.448344806467622 5.068534715628999 0.9913949780381318 1.1379485883497251 0.5261864280318991 0.0658414446402431 0.18496513972218123 8.65456080341943 0.019221045942071503 0.028500211121825266 3.5616824270672667e-06 5.448344806467622 0.1465536103115933 LEALSVK ddPTM_KYSE-520_SHP099_60min_R1 1 LEALSVK 7 0 P43487-2;P43487;F6WQW2;C9JXG8;Q5T0Z6;Q9C010;Q9C010-2 P43487-2 RANBP1;PKIB Ran-specific GTPase-activating protein;cAMP-dependent protein kinase inhibitor beta 0 111.82 0.022075 261070000.0 318030.0 376680.0 253830.0 221740.0 392600.0 401840.0 341220.0 402630.0 336620.0 386920.0 False True 300388.2419229129 358583.72739179333 270192.28794235975 242814.10293143807 423495.3864115657 399331.96750502056 375713.84758628334 401233.3705045482 275498.2934996476 383492.1898192046 0.7832968959929258 0.9350483188740969 0.7045574723953061 0.6331657055282182 1.1043129368846347 1.041304042445515 0.9797170778456054 1.0462621694947882 0.7183934922625929 1.0 18.548837670616546 -5.764906226108152 24.999849744373087 0.986862616838564 0.771986500452354 0.4417927633028508 0.11963325725594788 89.36250646274175 644403.9903082175 0.037556280514339485 0.04430108341417175 1.7182793620496715e-06 5.764906226108152 -0.21487611638621007 LEAS(ph)YSDSPPGEEDLLVHVAEGSK ddPTM_KYSE-520_SHP099_60min_R1 2 LEASYSDSPPGEEDLLVHVAEGSK 24 0 Q7Z3C6;C9JS65;C9JFV2;F2Z3I6;C9JX27;C9IYZ9;C9JKV7;C9JDK4;C9JXG2;Q7Z3C6-3 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 LEAS(0.998)YS(0.002)DSPPGEEDLLVHVAEGSK;LEAS(0.998)YS(0.002)DSPPGEEDLLVHVAEGSK 177.85 5.5122000000000004e-11 129041000.0 159522.0 154388.0 138499.0 140148.0 121677.0 150293.0 115557.0 142256.0 193227.0 142607.0 True False 150672.99666077693 146970.96873888743 147426.86714623496 153467.62378296745 131252.28765257294 149354.9656386424 127238.62928763877 141762.54713879986 158141.8476562783 141343.61292656712 1.0660049898332282 1.0398133010456152 1.0430387627266064 1.0857768568764348 0.9286043064483078 1.0566799768747772 0.9002078456402811 1.0029639415857468 1.11884679032818 1.0 17.108847166184887 -5.730177188510596 24.999096906253065 0.9990879073045096 1.0561966925206314 0.18866452459469996 0.058166017385056126 353.57349914020887 282736.8589266625 0.017045789542013714 0.02200390534169683 1.8613275756673356e-06 5.730177188510596 0.05710878521612184 LEASDCDHQQNS(ph)PTLERPGR ddPTM_KYSE-520_SHP099_60min_R1 6 LEASDCDHQQNSPTLERPGR 20 1 B1AN62;Q9HAN9 B1AN62 NMNAT1 Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1 1 LEASDCDHQQNS(1)PTLERPGR;LEASDCDHQQNS(1)PTLERPGR;LEASDCDHQQNS(0.988)PT(0.012)LERPGR;LEASDCDHQQNS(0.988)PT(0.012)LERPGR;LEASDCDHQQNS(1)PTLERPGR;LEASDCDHQQNS(0.969)PT(0.031)LERPGR 290.35 4.537699999999999e-44 8779100000.0 2887650.0 3005570.0 2914510.0 3372860.0 2858310.0 2806880.0 2495480.0 2580960.0 3272080.0 2931890.0 True False 2727466.298112437 2861177.9057474537 3102383.9779808754 3693415.6003126614 3083242.7354407622 2789361.220760731 2747747.471937807 2572007.2521605906 2677952.754424352 2905915.735575905 0.9385909800209323 0.9846045674068435 1.06760975206531 1.2709988645216812 1.0610227604654592 0.9598906074982677 0.9455702511598286 0.8850935423462514 0.921552102023917 1.0 21.47056143828621 -6.317904745603055 3.822441606505016 0.9320487366046712 1.0722701415868936 0.34001120218901093 0.08503053477288014 0.28491214494656497 8.520225748506569 0.03424025181567255 0.030592788988492093 4.809448231618284e-07 6.317904745603055 0.14022140498222235 LEASYS(ph)DSPPGEEDLLVHVAEGSK ddPTM_KYSE-520_SHP099_60min_R1 2 LEASYSDSPPGEEDLLVHVAEGSK 24 0 Q7Z3C6;C9JS65;C9JFV2;F2Z3I6;C9JX27;C9IYZ9;C9JKV7;C9JDK4;C9JXG2;Q7Z3C6-3 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 LEAS(0.121)Y(0.082)S(0.438)DS(0.359)PPGEEDLLVHVAEGSK;LEAS(0.106)YS(0.77)DS(0.124)PPGEEDLLVHVAEGSK 154.49 1.9428000000000002e-07 312289000.0 228993.0 240360.0 199468.0 203794.0 169726.0 191534.0 203999.0 225800.0 252544.0 175172.0 True False 216290.3018037717 228812.74481228474 212326.02644008413 223162.52048709945 183082.47059116018 190338.56526006994 224621.20975837918 225016.75250211632 206688.37571616346 173620.11236175368 1.2457675488258566 1.3178930810477307 1.2229345065604098 1.2853494762295716 1.0545003577102334 1.096293296156161 1.293751090831919 1.2960292989171263 1.1904633219307506 1.0 17.40557455542124 -11.430405199681596 1.5148357911747161 0.000124679115739892 1.2228154292100617 0.39160736993006473 0.08321864246496695 411518.74382680294 36394.91943577812 1399177.753422792 0.024887305512200284 3.711887458825746e-12 11.430405199681596 1.2226907500943218 LEASYSDS(ph)PPGEEDLLVHVAEGSK ddPTM_KYSE-520_SHP099_60min_R1 6 LEASYSDSPPGEEDLLVHVAEGSK 24 0 Q7Z3C6;C9JS65;C9JFV2;F2Z3I6;C9JX27;C9IYZ9;C9JKV7;C9JDK4;C9JXG2;Q7Z3C6-3 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 LEAS(0.022)Y(0.014)S(0.071)DS(0.893)PPGEEDLLVHVAEGSK;LEASYS(0.02)DS(0.98)PPGEEDLLVHVAEGSK;LEAS(0.041)Y(0.001)S(0.177)DS(0.781)PPGEEDLLVHVAEGSK;LEASYS(0.028)DS(0.971)PPGEEDLLVHVAEGSK;LEAS(0.032)Y(0.001)S(0.148)DS(0.819)PPGEEDLLVHVAEGSK;LEASYS(0.001)DS(0.999)PPGEEDLLVHVAEGSK 279.57 1.0282999999999999e-38 869483000.0 1240360.0 1499890.0 1257950.0 1316390.0 1241620.0 1262230.0 1158730.0 1281250.0 1662230.0 1263340.0 True False 1171554.758203641 1427833.0330192118 1339039.469791163 1441499.3098129157 1339328.4301485696 1254351.954369554 1275865.7365150158 1276805.6427959995 1360410.933408349 1252147.790463647 0.9356361662147213 1.1403071138196168 1.0693941082588514 1.1512213820056778 1.0696248800252575 1.001760306509099 1.018941810409286 1.019692445668272 1.0864619526299002 1.0 20.255973422318004 -6.110173433541649 6.288006612543292 1.0265449834441704 1.0822372529949487 0.13546273383159357 0.05900882041609955 0.43866558742034206 21.765111021631515 0.019002774609580407 0.019067549588332712 7.759371877338544e-07 6.110173433541649 0.05569226955077822 LEATINELV ddPTM_KYSE-520_SHP099_60min_R1 1 LEATINELV 9 0 P10599;P10599-2 P10599 TXN Thioredoxin 0 103.92 0.00085856 31245000.0 90128.0 116970.0 195700.0 191820.0 148860.0 97388.0 101470.0 95597.0 178130.0 117480.0 False True 85128.42017428642 111350.58562445057 208315.13513107115 210050.51512721425 160574.43510245983 96780.16536775572 111727.5778517675 95265.3963195076 145786.0822918785 116439.21859805689 0.7310974875926127 0.9562979463889048 1.7890461447544226 1.8039498860972218 1.3790408166234418 0.8311646757252523 0.9595356203604065 0.8181555790782108 1.2520359037716124 1.0 16.829217537384476 -6.250934467435946 23.718279168950623 0.9600229141506705 1.3626439795508407 0.23003673405831637 0.32625258082872405 557.2707941450093 1258221.0013641638 0.11988370580247422 0.11852717576062433 5.611326413645373e-07 6.250934467435946 0.4026210654001702 LEDAESS(ph)NPNLQSLLSTDALPSASK ddPTM_KYSE-520_SHP099_60min_R1 1 LEDAESSNPNLQSLLSTDALPSASK 25 0 Q9Y294 Q9Y294 ASF1A Histone chaperone ASF1A 1 LEDAES(0.132)S(0.837)NPNLQS(0.03)LLSTDALPSASK 116.65 0.00019153 197400000.0 122660.0 139470.0 96760.0 105180.0 89494.0 125990.0 110260.0 132840.0 141400.0 132190.0 True False 115855.80528335214 132769.6518512619 102997.3044214738 115176.27557647988 96536.66864879442 125203.6496763826 121406.15683390055 132379.20904508914 115725.32440392776 131018.89944226382 0.8842678863625044 1.0133625943772302 0.7861255502826269 0.8790813849511435 0.7368148340410636 0.9556151838350326 0.9266308704371362 1.0103825448741826 0.8832719927931048 1.0 16.999415409596246 -6.415539532347603 19.3205691757288 0.9541348596891513 0.8634919762627676 0.28681934135434817 0.07497931220910345 7.317944891282636 1305.6356036591408 0.026646681296941987 0.023500048942704074 3.8411429297145157e-07 6.415539532347603 -0.09064288342638371 LEDAFIVIS(ph)DS(ph)DGEEPKEENGLQK ddPTM_KYSE-520_SHP099_60min_R1 4 LEDAFIVISDSDGEEPKEENGLQK 24 1 Q96RL1-2;Q96RL1;D6RC40;D6RCQ3;Q96RL1-5;D6RDZ5 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 2 LEDAFIVIS(1)DS(1)DGEEPKEENGLQK;LEDAFIVIS(1)DS(1)DGEEPKEENGLQK;LEDAFIVIS(1)DS(1)DGEEPKEENGLQK;LEDAFIVIS(1)DS(1)DGEEPKEENGLQK 183.47 3.7731000000000005e-15 884920000.0 2091060.0 2089570.0 1810940.0 1965950.0 1984580.0 1910360.0 1892680.0 2222150.0 2421970.0 1925020.0 True False 1975064.7333752343 1989183.9206914841 1927676.0900064479 2152793.2969155805 2140755.155284425 1898436.7346279402 2084010.5651767359 2214441.8803037116 1982201.3008951943 1907965.8204428984 1.035167775131716 1.0425679010485274 1.0103305150188562 1.128318586134761 1.122009174560312 0.9950056307545666 1.0922682905781678 1.1606297432464856 1.0389081815077084 1.0 20.8636038962655 -5.242579346414048 24.68252416341102 1.0825554894701805 1.0306766471631377 0.14298233148124095 0.05177045100740937 1268.645418853538 1660300.031624946 0.014026815212697115 0.024252652972143657 5.720324337090953e-06 5.242579346414048 -0.05187884230704287 LEDFFAR ddPTM_KYSE-520_SHP099_60min_R1 4 LEDFFAR 7 0 P11413;P11413-3;P11413-2;E7EM57;E7EUI8;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;;; 146.94 0.010942 804868000.0 1398699.0 1383946.0 967125.0 915386.0 1514510.0 1403194.0 1109564.0 1169780.0 1182164.0 1168045.0 False True 1321110.3782326696 1317459.1568147019 1029467.4249547117 1002384.0102191641 1633693.3206168641 1394436.1457576128 1221729.5574210957 1165722.306208704 967512.8175293135 1157697.0300252577 1.1411538113765798 1.137999945275802 0.8892373377966182 0.8658431214920668 1.4111579094067654 1.2044914252973338 1.055310263164829 1.0069321039747947 0.835721948347924 1.0 20.14282631792862 -7.386492949019051 2.8026517372146666 0.919769444640705 1.1021860506145211 0.1919566584240775 0.15046600385612593 0.5135544158585033 7.603262168807481 0.11328661782567273 0.04499310630045971 4.106833074628086e-08 7.386492949019051 0.18241660597381615 LEDFRDYR ddPTM_KYSE-520_SHP099_60min_R1 5 LEDFRDYR 8 1 P12814-3;P12814;P12814-2;P12814-4;H9KV75;A0A494C1A0;P35609;P35609-2;F6THM6;Q08043;A0A087WSZ2;O43707;O43707-2;K7EJH8 P12814-3;O43707 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 0 ;;;; 105.78 0.0047262 1802630000.0 5785050.0 7384290.0 5606290.0 2474610.0 4825100.0 4524590.0 2596690.0 2422350.0 5882590.0 3607180.0 False True 5464141.74428874 7029537.624354738 5967680.423781156 2709796.190381377 5204807.918936439 4496350.355498556 2859188.766452219 2413947.4332307377 4814459.944026172 3575223.1915435777 1.5283358413015984 1.966181479517586 1.669177028694718 0.7579376294019399 1.455799439667793 1.2576418630684951 0.7997231538481333 0.675187898461951 1.3466180112653505 1.0 21.769601877587835 -5.164568933461148 6.1487066798016565 1.045599141110068 1.7599117414056586 0.5856934418239647 0.2618890810882559 0.16552964396902473 8.726012007444538 0.07308454030138038 0.12822201090884672 6.845908126806867e-06 5.164568933461148 0.7143126002955906 LEDHEYKPLDPK ddPTM_KYSE-520_SHP099_60min_R1 3 LEDHEYKPLDPK 12 1 J3QK89;Q8IWX8 J3QK89 CHERP Calcium homeostasis endoplasmic reticulum protein 0 ;; 186.58 1.006e-07 2976180000.0 5919280.0 5219880.0 3451010.0 3205110.0 5217650.0 4942270.0 3914340.0 4397050.0 4329300.0 4263270.0 False True 5590925.738607861 4969109.1296003815 3673467.6264112275 3509722.690748542 5628249.370632475 4911423.459688026 4310039.68747697 4381797.65982919 3543208.252771738 4225500.744573872 1.3231392151066081 1.175981127439489 0.8693567575697315 0.8306051525977157 1.3319721639760511 1.1623293324453852 1.0200068460552654 1.036988968811809 0.8385297901844434 1.0 22.01069088797494 -4.539038381883277 6.702292614536475 1.0227448048541008 1.2892154038615604 0.31981213432102107 0.14541240371007008 0.16722544463034056 33.033001797776784 0.03968464296009786 0.11454643844654107 2.8904244224416925e-05 4.539038381883277 0.2664705990074596 LEDIFQQEFST(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 2 LEDIFQQEFSTPSR 14 0 Q9H4L4;A0A087X0R7;J3QL36 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 LEDIFQQEFS(0.159)T(0.841)PSR;LEDIFQQEFS(0.105)T(0.889)PS(0.005)R 115.68 0.00063807 197887000.0 322488.0 355690.0 251975.0 240259.0 248610.0 355970.0 292725.0 334870.0 336568.0 364070.0 True False 304598.9477761104 338602.1184984255 268217.71167425456 263093.14312349743 268174.1926025967 353748.2591896331 322316.4997206923 333708.41412924597 275455.7353888344 360844.62304217427 0.8441277168220681 0.9383598836634206 0.7433052747550744 0.7291036815387104 0.7431846714015008 0.9803340180249499 0.8932279411657494 0.9247980787848494 0.7633638352888524 1.0 18.46101823171343 -6.255896612394386 24.991635901141922 0.9064498524809902 0.8002784748388393 0.3180015593043054 0.08231422933082443 650.4316746066836 2932715.7767989957 0.028881485662340386 0.028126105372815895 5.547577621842313e-07 6.255896612394386 -0.1061713776421509 LEDLDTCMMT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 LEDLDTCMMTPK 12 0 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 LEDLDT(0.183)CMMT(0.817)PK;LEDLDT(0.002)CMMT(0.998)PK;LEDLDTCMMT(1)PK;LEDLDTCMMT(1)PK;LEDLDTCMMT(1)PK;LEDLDTCMMT(1)PK;LEDLDTCMMT(1)PK;LEDLDTCMMT(1)PK;LEDLDTCMMT(1)PK;LEDLDTCMMT(1)PK 297.03 3.1639e-29 13181960000.0 7041740.0 7633800.0 5269690.0 4950880.0 4611360.0 7044920.0 5195850.0 7112890.0 7529110.0 7221790.0 True False 6651120.6448393315 7267060.789432587 5609382.649202119 5421410.146663645 4974247.79695069 7000950.041099613 5721097.224609307 7088217.044751009 6162013.417417651 7157810.559067594 0.9292116059726697 1.0152630793262045 0.7836729685582542 0.7574117953982091 0.6949398500983318 0.9780854052124545 0.7992803354318672 0.990277262335698 0.8608796456077682 1.0 22.771086930749554 -10.490293068823183 8.760790418997523 1.0000045864703169 0.8660587217703042 0.1286469837257197 0.10324236611806346 9.685772266299976e-06 5.634982862113069e-07 0.10468773618041537 0.02538963630560333 3.2337536444556977e-11 10.490293068823183 -0.13394586470001268 LEDLLQDAQDEKEQLNEYK ddPTM_KYSE-520_SHP099_60min_R1 3 LEDLLQDAQDEKEQLNEYK 19 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;; 166.91 1.0541e-08 578994000.0 407350.0 384630.0 259378.0 237217.0 376980.0 358350.0 267325.0 290068.0 305742.0 318936.0 False True 384753.4834679074 366151.7974585997 276097.9208994738 259762.0323581084 406646.18127720925 356113.4047268167 294348.8198405814 289061.82181038026 250226.95992861164 316110.47516845324 1.2171487935123781 1.158303271232881 0.8734222450310859 0.8217444620260778 1.286405270374258 1.126547307668454 0.9311580696075472 0.9144329103815402 0.7915807275771779 1.0 18.270069318041074 -6.878329039829075 5.309518100821837 0.8962123640516589 1.0718404147992322 0.25817070330915604 0.14207306104848788 0.3340388218282948 14.149956706889698 0.06578289290446981 0.04394596075810218 1.32333853815762e-07 6.878329039829075 0.17562805074757326 LEDQLSEGRNS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 2 LEDQLSEGRNSPEK 14 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 LEDQLSEGRNS(1)PEK;LEDQLSEGRNS(1)PEK 187.78 7.0377e-09 0.0 364800.0 303760.0 280960.0 327670.0 373310.0 348040.0 289310.0 342850.0 388120.0 325560.0 True False 344563.8167892292 289166.91364694433 299071.1311518942 358811.6582824222 402687.3731566523 345867.75326111715 318556.2781935045 341660.7333717917 317647.1917089989 322675.7916818472 1.0678328702419773 0.8961531081701287 0.9268471291046626 1.1119881550835533 1.2479627649095386 1.0718738813915636 0.98723327378583 1.0588359653229373 0.9844159366693166 1.0 18.299725820062648 -5.2587570860683135 24.953701987319878 1.0730348262385152 0.9568652400451757 0.23603118668437084 0.0835286001831314 325.7694560750244 3030660.249510346 0.024621779376963488 0.04032612513274389 5.5111586584929524e-06 5.2587570860683135 -0.1161695861933395 LEDQLSEGRNS(ph)PEKAENKR ddPTM_KYSE-520_SHP099_60min_R1 2 LEDQLSEGRNSPEKAENKR 19 3 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 LEDQLSEGRNS(1)PEKAENKR;LEDQLSEGRNS(1)PEKAENKR 208.89 1.1443e-18 1453920000.0 1628500.0 1552370.0 1507240.0 1358340.0 1452520.0 1446330.0 1346190.0 1377680.0 1820290.0 1346950.0 True False 1538163.858665733 1477791.8150451237 1604399.102069268 1487436.225200187 1566825.0602917175 1437302.9179811277 1482276.0227483106 1372901.149632931 1489771.221776701 1335017.0709112433 1.15216793266608 1.1069460063431447 1.2017817127792625 1.114170191235762 1.173636723028754 1.0766176323124221 1.1103049204730788 1.0283772241922189 1.115919229976458 1.0 20.348426759148264 -7.428622091078717 0.4266044473009947 1.0029572276169998 1.1585651570804523 0.5656347081824635 0.03851429155535725 0.7166692128956834 0.35406829739578943 0.04306713917960924 0.031697110679730765 3.727158904223e-08 7.428622091078717 0.15560792946345248 LEDTYFDRDVEK ddPTM_KYSE-520_SHP099_60min_R1 1 LEDTYFDRDVEK 12 1 Q01581 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic 0 193.81 1.1889000000000001e-07 0.0 315920.0 306190.0 188290.0 163830.0 288530.0 276210.0 213230.0 208570.0 240550.0 243830.0 False True 298395.28782909317 291480.1727994404 200427.47467465172 179400.3539427145 311235.6694888667 274486.0709351027 234785.36932425766 207846.51935060415 196872.18377202837 241669.8558968692 1.2347228276431428 1.206108936167146 0.8293441229185928 0.7423364956996219 1.2878547402357212 1.1357894426528625 0.9715128452944108 0.8600432129992294 0.8146327684990307 1.0 17.882678007696626 -7.014524188610202 4.5671833130174955 0.88202817651051 1.0625122046166942 0.18932201509240187 0.16807672034858298 0.376867860481675 20.02407890427223 0.08580296022727527 0.05169669406629436 9.671098606768538e-08 7.014524188610202 0.18048402810618414 LEDVKNS(ph)PTFK ddPTM_KYSE-520_SHP099_60min_R1 2 LEDVKNSPTFK 11 1 H0YC42;P55327-2;P55327;P55327-3 H0YC42 TPD52 Tumor protein D52 1 LEDVKNS(0.929)PT(0.071)FK;LEDVKNS(0.979)PT(0.021)FK 103.21 0.00090401 300600000.0 1465040.0 1025280.0 887360.0 1122370.0 1105460.0 1290160.0 1426530.0 1957990.0 2137400.0 1533670.0 True False 1383771.310715166 976024.009823346 944560.6454261988 1229039.7073471549 1192453.412792995 1282107.632879447 1570737.5739911487 1951198.1896883033 1749302.0394692717 1520082.8769772027 0.9103262273876129 0.6420860497844972 0.6213875965135056 0.8085346700248287 0.7844660517223093 0.8434458754176699 1.033323641612671 1.2836130313949758 1.1507938586532125 1.0 20.535718552824942 -6.764108881547008 2.1213728328219768 1.1652440702253868 0.7439529251204348 0.7464892939349135 0.10150048883606344 0.14772659767109772 1.3605428220599636 0.05047079141097261 0.032550277700732135 1.721436941100393e-07 6.764108881547008 -0.421291145104952 LEEDRQS(ph)LDLSSEWWDDKLHAR ddPTM_KYSE-520_SHP099_60min_R1 6 LEEDRQSLDLSSEWWDDKLHAR 22 2 E9PJF5;G5E9I4;Q9HCU9;H0YCF7 E9PJF5 BRMS1 Breast cancer metastasis-suppressor 1 1 LEEDRQS(1)LDLSSEWWDDKLHAR;LEEDRQS(1)LDLSSEWWDDKLHAR;LEEDRQS(1)LDLSSEWWDDKLHAR;LEEDRQS(1)LDLSSEWWDDKLHAR;LEEDRQS(1)LDLSSEWWDDKLHAR;LEEDRQS(1)LDLSSEWWDDKLHAR 233.87 5.4409e-27 967337000.0 678433.0 705427.0 700919.0 788026.0 668138.0 599909.0 639214.0 686315.0 927968.0 504413.0 True False 640798.9690673436 671537.2280524859 746101.3602500514 862919.7541113448 720716.659414802 596164.7454060548 703831.9892474598 683934.3334521246 759472.4033696179 499944.2932473759 1.281740741363502 1.343224109411335 1.4923689905604647 1.7260318114769762 1.4415939318626971 1.19246234722209 1.4078208287482117 1.3680210829283517 1.519114056561149 1.0 18.931407824657935 -6.024876526549461 23.96095217573294 1.326230699572782 1.4708322108809904 0.1711362874775646 0.16957532149255958 932.4299340868816 898110.2993758341 0.05701155970638782 0.05730777191066301 9.4432931862341e-07 6.024876526549461 0.14460151130820842 LEEHFK ddPTM_KYSE-520_SHP099_60min_R1 4 LEEHFK 6 0 H0Y8C6;O00410-2;O00410;O00410-3 H0Y8C6 IPO5 Importin-5 0 ;;; 129.96 0.01242 1470860000.0 5196830.0 4618250.0 3226980.0 3142530.0 5299120.0 4960140.0 3789350.0 4197630.0 4057770.0 4257460.0 False True 4908551.480276231 4396382.337865425 3434996.294150553 3441195.106363902 5716130.596131585 4929181.926389483 4172414.4784921226 4183069.4012642046 3320981.2560574654 4219742.216653761 1.163234915370895 1.0418604057173282 0.8140298904027582 0.8154988929851633 1.3546160648326175 1.1681239453291306 0.9887842110414106 0.9913092285010153 0.7870104583523565 1.0 22.008723436949822 -7.428302409434439 2.8655586071967343 0.8943909883585778 1.0480792180529208 0.12379282369137501 0.16078937220651568 0.6431346755257242 9.956942735251639 0.12420589090799346 0.04771894737469874 3.7299034542321884e-08 7.428302409434439 0.15368822969434304 LEEHYELR ddPTM_KYSE-520_SHP099_60min_R1 14 LEEHYELR 8 0 P05120 P05120 SERPINB2 Plasminogen activator inhibitor 2 0 ;;;;;;;;;;;;; 223.83 7.217899999999999e-09 33594310000.0 54023690.0 49044250.0 31189190.0 27229290.0 49275770.0 44024810.0 33449200.0 38058880.0 36520000.0 38773470.0 False True 51026888.22214398 46688090.6130799 33199695.09186841 29817153.534815475 53153492.75822065 43750034.83061594 36830571.56873303 37926862.62828933 29888888.594281733 38429967.22110316 1.3277890123758271 1.2148875991609467 0.863901207639786 0.7758828771116384 1.3831261539310478 1.138435392851216 0.9583815504403592 0.9869085344278523 0.7777495208965143 1.0 25.19572841006393 -4.59346305008825 5.669230868378903 0.9969513687620394 1.3019353252742145 0.32022102530276986 0.16924779588412583 0.2278992853315569 12.881540873406498 0.046143604228737194 0.12852035147747873 2.549981031762255e-05 4.59346305008825 0.30498395651217514 LEELHVIDVK ddPTM_KYSE-520_SHP099_60min_R1 1 LEELHVIDVK 10 0 Q16531;F5H2L3;F5GY55;F5GWI0 Q16531 DDB1 DNA damage-binding protein 1 0 128.17 0.00013524 0.0 146820.0 127150.0 78745.0 76978.0 120150.0 120560.0 78880.0 98703.0 94804.0 101420.0 False True 138675.60192158617 121041.52314395897 83821.02869645477 84293.96597572035 129605.12144001435 119807.54032053874 86853.96019461344 98360.62233045342 77589.98341435613 100521.49770356608 1.3795616369598376 1.2041356914608021 0.8338617172581299 0.8385665544329624 1.2893274016093028 1.19185988129471 0.8640336861150072 0.9785033508007909 0.7718745262149388 1.0 16.617144546126262 -4.556766942563782 5.087622994198908 0.9814246092989354 1.3437702990401585 0.423549360576412 0.155328081525633 0.16964758993771312 10.915612488160567 0.04290520764890418 0.12891402523765672 2.774808763514283e-05 4.556766942563782 0.36234568974122316 LEELKESILADK ddPTM_KYSE-520_SHP099_60min_R1 1 LEELKESILADK 12 1 B1AJY6;B1AJY5;B1AJY7;O75832-2;O75832 B1AJY6 PSMD10 26S proteasome non-ATPase regulatory subunit 10 0 121.76 0.00012896 61542000.0 178870.0 191150.0 122600.0 105250.0 174020.0 168990.0 117750.0 136590.0 183530.0 155360.0 False True 168947.72453149498 181966.86707800065 130502.99216693574 115252.92835543356 187714.3839616422 167935.27072634222 129653.31912925633 136116.20117034556 150205.5784148009 153983.63126825105 1.0971797660569218 1.1817286394616886 0.8475121095150024 0.7484751944487807 1.2190541450125283 1.090604691831084 0.8419941656226467 0.8839653932645667 0.9754645813822347 1.0 17.23241747247882 -4.749939750980593 24.977914922907278 0.9501894403371697 1.1394542708525883 0.2552133644986827 0.12884953324355444 317.8546006823311 690387.2873953626 0.03514752801550539 0.09128236478597734 1.778526125176122e-05 4.749939750980593 0.18926483051541865 LEEPPELNRQS(ph)PNPR ddPTM_KYSE-520_SHP099_60min_R1 11 LEEPPELNRQSPNPR 15 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR;LEEPPELNRQS(1)PNPR 202.07 9.8872e-12 28664780000.0 11512110.0 10549190.0 9832490.0 8292730.0 8879690.0 9854590.0 8310670.0 9701360.0 12091950.0 9758420.0 True False 10873510.30947766 10042391.077743 10466308.037940245 9080868.56589981 9578471.084475078 9793083.848435443 9150793.627923017 9667708.24647445 9896356.693253694 9671967.990735888 1.1242293522779074 1.0382986262322118 1.0821280682447667 0.9388852997236703 0.9903332076418817 1.0125223592360482 0.9461149619899416 0.9995595783334356 1.0231999012747697 1.0 23.20537803933687 -5.243363723138663 24.742329403282085 0.9866823350224633 1.0772266920448348 0.6498149823925781 0.031680735569412435 455.6142074288738 623653.1485838541 0.008424653893108416 0.014551145094365772 5.710002216916557e-06 5.243363723138663 0.09054435702237151 LEEQAAQHK ddPTM_KYSE-520_SHP099_60min_R1 2 LEEQAAQHK 9 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 151.83 0.00042602 609540000.0 801950.0 749440.0 584540.0 627400.0 859360.0 817830.0 635700.0 762370.0 720440.0 704020.0 False True 757464.234852309 713435.777467626 622220.3836970677 687027.9073653116 926986.7429104527 812725.6196113643 699962.7598341252 759725.5164084951 589626.2568144677 697782.9305192722 1.0855299000917427 1.0224322583195111 0.8917105255556012 0.9845868640753981 1.3284743755778217 1.1647255673144006 1.0031239361404711 1.0887705662893283 0.8449995421580218 1.0 19.412418780544048 -7.74677183616363 24.98844081649674 0.9224997604158098 1.0701038685570852 0.2085120653211232 0.11584637465685108 353.0773623490631 601528.4499718474 0.08612442125396727 0.03224623455291343 1.7915468257873548e-08 7.74677183616363 0.14760410814127534 LEEQRPER ddPTM_KYSE-520_SHP099_60min_R1 2 LEEQRPER 8 1 Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;P13693-2;E9PJF7;Q9HAU6 Q5W0H4 TPT1;TPT1P8 Translationally-controlled tumor protein;Putative translationally-controlled tumor protein-like protein TPT1P8 0 ; 110.76 0.0011860999999999998 1508920000.0 1938040.0 1692130.0 1376840.0 1273870.0 2006580.0 1765200.0 1355670.0 1537060.0 1704270.0 1791560.0 False True 1830533.0578130418 1610837.5348610864 1465593.3094218906 1394938.221797018 2164486.430121551 1754182.732032306 1492714.3536641933 1531728.2976125 1394817.529150507 1775688.1722125867 1.030886552300518 0.9071623948781001 0.825366374770462 0.7855761183895609 1.2189563820907272 0.9878889545378432 0.8406399147234306 0.8626110831745295 0.7855081488843292 1.0 20.759946822239026 -6.766290535217085 24.9859180014583 0.8607406978022261 0.9547532567425925 0.10496241808807694 0.12238665949458255 296.01967104431833 1524630.683857892 0.05303863534159227 0.03703967416725919 1.7128110842624977e-07 6.766290535217085 0.09401255894036642 LEESPFVPYDFMNSSTSPAS(ph)PPGSIGDGWPR ddPTM_KYSE-520_SHP099_60min_R1 2 LEESPFVPYDFMNSSTSPASPPGSIGDGWPR 31 0 H7C269;Q8NDV7-2;Q8NDV7-6;Q8NDV7-5;Q8NDV7;Q8NDV7-3 H7C269 TNRC6A Trinucleotide repeat-containing gene 6A protein 1 LEESPFVPYDFMNS(0.004)S(0.052)T(0.052)S(0.2)PAS(0.687)PPGS(0.004)IGDGWPR;LEESPFVPYDFMNSST(0.002)S(0.031)PAS(0.967)PPGSIGDGWPR 142.46 1.1873e-06 208610000.0 153641.0 201532.0 133869.0 119436.0 126811.0 179467.0 141701.0 181912.0 195376.0 181047.0 True False 145118.22745425973 191850.10021430097 142498.40993797334 130787.16153025723 136790.3042441087 178346.8798830967 156025.5199484902 181280.9897305798 159900.64342815976 179443.06443243448 0.8087146076849404 1.0691419076079036 0.7941148931483397 0.7288504682191403 0.7623047715818196 0.9938911846339399 0.8694987484859764 1.0102423869318022 0.8910940299304072 1.0 17.453166637756325 -6.271172676989746 24.876786493704476 0.9483700111373737 0.8378603994708456 0.2811624468870112 0.0958714488259272 1034.4489170764014 2643882.244558285 0.035585869846836614 0.03176661063147989 5.355836652531586e-07 6.271172676989746 -0.11050961166652817 LEFLHK ddPTM_KYSE-520_SHP099_60min_R1 2 LEFLHK 6 0 Q15393;Q15393-3 Q15393 SF3B3 Splicing factor 3B subunit 3 0 ; 101.52 0.019806999999999998 1485190000.0 2906600.0 2404400.0 1744780.0 1577020.0 2885600.0 7255900.0 1883000.0 2096340.0 2091470.0 2254000.0 False True 2745365.1038365485 2288889.0149220214 1857251.3105467046 1726899.506651648 3112680.3031819044 7210613.236660557 2073352.016309039 2089068.285829433 1711711.7696681938 2234031.313585465 1.2288838957366397 1.0245554755669533 0.8313452453654042 0.7729970014968566 1.3933020026412561 3.227624068119271 0.9280765241295804 0.9351114611176259 0.7661986469298926 1.0 21.091217977006572 -5.82347612330048 8.189209433601716 1.4440079725660309 0.9598852396376079 0.07738036889988387 0.6702827692781977 0.682582231459 80.18235593553023 0.22415074959695092 0.2551047743588933 1.501494952873267e-06 5.82347612330048 -0.484122732928423 LEGDS(ph)DVDS(ph)ELEDRVDGVK ddPTM_KYSE-520_SHP099_60min_R1 1 LEGDSDVDSELEDRVDGVK 19 1 Q92614;Q92614-2 Q92614 MYO18A Unconventional myosin-XVIIIa 2 LEGDS(1)DVDS(1)ELEDRVDGVK 160.0 8.995200000000001e-09 104360000.0 278780.0 255330.0 204560.0 229850.0 216730.0 235040.0 208800.0 228320.0 317850.0 219180.0 True False 263315.517665848 243063.5635418564 217746.26490757256 251694.87489307747 233785.4179749839 233573.02817633914 229907.54169162372 227528.01121028842 260136.45234645283 217238.23571945945 1.2121048433015842 1.1188802134065738 1.0023385808968233 1.158612221552541 1.076170671340258 1.0751929898656256 1.0583198714084814 1.0473663186259583 1.1974708388001822 1.0 17.7289185261428 -1.0000000000001859 0.010619326309239776 1.054013239537444e-11 2.338474566567233 0.18093813876080267 0.06450563371992062 21670.032375472336 17.829686105344646 1676.233725450382 2294.990278728067 0.0999999999999572 1.0000000000001859 2.338474566556693 LEGDSDDLLEDS(ph)DSEEHSR ddPTM_KYSE-520_SHP099_60min_R1 5 LEGDSDDLLEDSDSEEHSR 19 0 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 LEGDSDDLLEDS(1)DSEEHSR;LEGDSDDLLEDS(1)DSEEHSR;LEGDSDDLLEDS(1)DSEEHSR;LEGDSDDLLEDS(1)DSEEHSR;LEGDSDDLLEDS(1)DSEEHSR 233.26 3.9736000000000004e-26 3111670000.0 3331890.0 3232530.0 3107220.0 3452540.0 3022610.0 3265350.0 3027670.0 3054810.0 3891730.0 3041380.0 True False 3147063.419741953 3077234.406673552 3307516.372927781 3780668.363555994 3260472.210701642 3244969.7394299163 3333736.4308116795 3044213.577108016 3185089.934529687 3014435.739357832 1.0439975145770979 1.0208326442311548 1.0972257028880585 1.2541877453859385 1.0816194115971514 1.0764766676105013 1.1059238673709026 1.0098784118571151 1.056612318167449 1.0 21.523456544180718 -7.257570496087286 24.441201962421843 1.0249340215660026 1.0988897265551623 0.24682817415922464 0.05994020965847601 393.4499631845913 2485590.2377320305 0.032075685978981625 0.017607602969105157 5.5262369699471494e-08 7.257570496087286 0.07395570498915971 LEGFHTQISK ddPTM_KYSE-520_SHP099_60min_R1 1 LEGFHTQISK 10 0 H0YLU2;Q06323-3;Q06323;Q06323-2;H0YKK6 H0YLU2 PSME1 Proteasome activator complex subunit 1 0 125.74 0.00073118 266940000.0 468840.0 441150.0 280350.0 308820.0 427300.0 432950.0 313180.0 381810.0 360310.0 376250.0 False True 442832.5105906314 419956.4918203504 298421.8095758597 338170.15994988143 460926.0789955739 430247.7984553521 344839.2907422546 380485.5902251243 294886.7866759493 372916.7177180707 1.1874836647184528 1.1261401590953675 0.8002371451780018 0.9068248857793013 1.2360027241901215 1.15373695523252 0.924708586014524 1.0202964151174787 0.7907577554591882 1.0 18.508493948481416 -6.790148228090426 24.963586747800814 0.9356319611891152 1.0591128155941645 0.1890709944307415 0.13558868827574486 442.60157781554193 384857.0716089538 0.0616018799280677 0.04154011469594121 1.6212566553889672e-07 6.790148228090426 0.1234808544050493 LEGPPEANADPLGVLINS(ph)DS(ph)ES(ph)DKEEKPQHSVIPK ddPTM_KYSE-520_SHP099_60min_R1 1 LEGPPEANADPLGVLINSDSESDKEEKPQHSVIPK 35 2 Q9UHK0 Q9UHK0 NUFIP1 Nuclear fragile X mental retardation-interacting protein 1 3 LEGPPEANADPLGVLINS(1)DS(1)ES(1)DKEEKPQHS(0.001)VIPK 82.554 0.01371 307730000.0 109000.0 97584.0 111020.0 94923.0 94228.0 97158.0 89375.0 104160.0 145260.0 103920.0 True False 102953.55271388705 92895.91816342984 118176.52683828073 103944.45338035928 101643.207516019 96551.60088306987 98409.89721594285 103798.69327112679 118884.44570660917 102999.3496485365 0.9995553667590551 0.901907812820348 1.1473521652469956 1.009175822323614 0.9868334883943923 0.9374001021611476 0.9554419280485345 1.007760666696614 1.1542252073656503 1.0 16.652275702507506 -7.549265886179606 24.062606001394144 1.0784062584776937 0.9913882802977594 0.1907395616876233 0.06988436845876342 238.46067224274512 217447.3158341123 0.04711722046679102 0.01781001900077071 2.8231510405121406e-08 7.549265886179606 -0.08701797817993429 LEGPVS(ph)PDVEPGKEETEESK ddPTM_KYSE-520_SHP099_60min_R1 1 LEGPVSPDVEPGKEETEESK 20 1 O14686-3;O14686;A0A3B3ISC8 O14686-3 KMT2D Histone-lysine N-methyltransferase 2D 1 LEGPVS(1)PDVEPGKEETEESK 147.39 9.454799999999999e-07 782800000.0 724930.0 713400.0 610200.0 644650.0 631370.0 739320.0 567100.0 775170.0 931300.0 767370.0 True False 684716.6877878719 679127.1931647686 649534.4683545203 705917.3421789102 681055.2269961039 734705.6296431709 624428.002362643 772481.1161960383 762199.3961625032 760571.6988048262 0.90026579856159 0.892916728602917 0.8540082011665809 0.9281404281650227 0.8954517083219429 0.9659912810293866 0.8209982087735824 1.015658507159715 1.0021400971929861 1.0 19.536724731110326 -7.285844040343385 24.904954573913642 1.006674505068909 0.8965317450964907 0.6604324449724002 0.036757729470248794 451.7055482734356 460962.687925868 0.019192471827905854 0.009227174920429423 5.177927433162558e-08 7.285844040343385 -0.11014275997241829 LEGPVS(ph)PDVEPGKEETEESKK ddPTM_KYSE-520_SHP099_60min_R1 1 LEGPVSPDVEPGKEETEESKK 21 2 O14686-3;O14686;A0A3B3ISC8 O14686-3 KMT2D Histone-lysine N-methyltransferase 2D 1 LEGPVS(1)PDVEPGKEETEESKK 146.5 7.1101e-07 636640000.0 453520.0 359570.0 344340.0 354510.0 395550.0 385530.0 372400.0 414880.0 533600.0 456860.0 True False 428362.34153029363 342295.71747442667 366536.70736348 388202.523812682 426677.53462836234 383123.76426490746 410045.8262737586 413440.8781137195 436711.69096135616 452812.57583170204 0.9460036323936023 0.755932444777436 0.809466712999843 0.857313918677396 0.9422828724327361 0.8460978884281342 0.9055530878766083 0.9130507856464307 0.9644424962341811 1.0 18.788554500711925 -7.324729770691399 0.45794405556169815 1.0044977694572106 0.8324841728561694 0.456706461727476 0.05293640513881754 0.8563358179478499 0.45229608216375256 0.058284911782969635 0.04219875239977681 4.734457575790191e-08 7.324729770691399 -0.1720135966010412 LEGVDGGQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 LEGVDGGQSPR 11 0 O00418;H3BRH4 O00418 EEF2K Eukaryotic elongation factor 2 kinase 1 LEGVDGGQS(1)PR 106.54 0.0023350000000000003 323330000.0 1035800.0 925650.0 961620.0 842770.0 876080.0 961380.0 782500.0 954890.0 1118600.0 865640.0 True False 978342.1091838921 881180.3845710238 1023607.5638464006 922866.6074119611 945022.5117866659 955379.6708141965 861602.7364640603 951577.7094630012 915490.4376112685 857971.1030577293 1.1402972730633605 1.0270513557281575 1.193055990112439 1.0756383334158344 1.1014619355112234 1.113533622996523 1.0042328155265232 1.1091022833655664 1.067041109366674 1.0 19.710569532211323 -6.7210846723351985 24.999278190059442 1.054185791523261 1.1068329091608708 0.27457835890143056 0.04957692665057582 233.41714173529647 144598.75749841693 0.01805152569439677 0.013982477109279356 1.9007076718372498e-07 6.7210846723351985 0.052647117637609764 LEGVLAEVAQHYQDTLIR ddPTM_KYSE-520_SHP099_60min_R1 3 LEGVLAEVAQHYQDTLIR 18 0 P46940;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 0 ;; 247.61 1.2667999999999999e-23 283475600.0 347860.0 280948.0 195240.0 329450.0 331765.0 259225.0 201344.0 288484.0 238473.0 128303.0 False True 328563.512358282 267450.8363684543 207825.4827950452 360760.8289472461 357873.01801536704 257607.08062036868 221697.8164480763 287483.3163366717 195172.3146151193 127166.33523822353 2.583730291061519 2.1031575366816435 1.6342806640273235 2.8369208585859202 2.8142119323086217 2.0257490328536054 1.743368762123756 2.2606872785798444 1.5347797374949799 1.0 16.956357270743002 -8.020295255196835 0.7339298260643946 0.9910283960363137 2.324444102758467 0.5385214006425632 0.3825130593960226 0.6414660493520715 0.7921151507869816 0.40129779930354326 0.15530425165889108 9.543435547536597e-09 8.020295255196835 1.3334157067221533 LEHEISHLK ddPTM_KYSE-520_SHP099_60min_R1 1 LEHEISHLK 9 0 P12270 P12270 TPR Nucleoprotein TPR 0 179.8 3.0160999999999998e-05 367220000.0 513370.0 496950.0 345730.0 362060.0 505260.0 479500.0 394100.0 468890.0 390920.0 379880.0 False True 484892.3427222771 473075.7760628427 368016.3089875588 396470.0735426913 545021.0874638516 476507.26263850555 433939.47404534894 467263.53002974903 319938.7822912544 376514.55874216754 1.2878448693781461 1.2564607797458347 0.9774291602879871 1.0530006458905325 1.4475431953670486 1.2655746014985088 1.1525171177842959 1.2410238042075956 0.8497381438850137 1.0 18.522346125307568 -7.756388478861864 24.999524410009858 0.9248690280150936 1.2065569550550945 0.44525784208182306 0.12733118109103597 111.49731790825695 551879.5619580258 0.09804627518919472 0.03450469327453754 1.7523123473136104e-08 7.756388478861864 0.2816879270400009 LEHEYIQNFK ddPTM_KYSE-520_SHP099_60min_R1 2 LEHEYIQNFK 10 0 Q15691 Q15691 MAPRE1 Microtubule-associated protein RP/EB family member 1 0 ; 146.11 0.00032543 990260000.0 1388260.0 1067120.0 757570.0 655220.0 998520.0 1162170.0 777720.0 862910.0 819770.0 975290.0 False True 1311250.4503723006 1015853.9534202238 806404.1743548574 717491.9118009238 1077097.8431983618 1154916.4659449267 856339.5274157561 859916.7666147086 670920.4327199983 966649.689364138 1.3564898068035804 1.0509018567920427 0.8342258661307903 0.7422460480723786 1.114258717557626 1.1947621549484289 0.8858840351762345 0.8895846924446453 0.6940678097784624 1.0 19.882633630961934 -6.973798593041987 24.219225579714575 0.8526425372948487 1.0292055896289842 0.19840110412194378 0.17629987454264845 286.47712572098357 264803.6182832078 0.07908485438062887 0.05331689111023601 1.062188039770572e-07 6.973798593041987 0.1765630523341355 LEIS(ph)PDS(ph)SPER ddPTM_KYSE-520_SHP099_60min_R1 1 LEISPDSSPER 11 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 2 LEIS(1)PDS(0.943)S(0.057)PER 119.39 0.0012373 496290000.0 1537500.0 1699600.0 1697600.0 1717100.0 1737300.0 1655200.0 1453600.0 1716900.0 1994800.0 1468200.0 True False 1452211.810069737 1617948.6648483912 1807030.0122560356 1880292.6677350616 1874015.6261151645 1644869.2828347364 1600544.07376889 1710944.4746274734 1632594.6048158058 1455192.890242315 0.997951419229322 1.1118448115692585 1.2417804020160748 1.2921260681956468 1.2878125220932795 1.1303445019998943 1.0998844788901982 1.17575098538488 1.121909415420488 1.0 20.472778968747534 -6.498597185837987 24.215907436340885 1.1141867342464544 1.1929227054984568 0.1614431364078297 0.09105649232026584 1116.17722593998 1113161.5168147106 0.03499006057453244 0.030685101531749515 3.172508644656489e-07 6.498597185837987 0.07873597125200238 LEITSENGEKS(ph)DDGTQDLLHFPTK ddPTM_KYSE-520_SHP099_60min_R1 3 LEITSENGEKSDDGTQDLLHFPTK 24 1 E9PRS0;E9PLV1;Q9NQV6-2;Q9NQV6-1;Q9NQV6-5;Q9NQV6;Q9NQV6-4;Q9NQV6-7;Q9NQV6-6 E9PRS0 PRDM10 PR domain zinc finger protein 10 1 LEIT(0.016)S(0.02)ENGEKS(0.964)DDGTQDLLHFPTK;LEIT(0.23)S(0.2)ENGEKS(0.569)DDGTQDLLHFPTK;LEIT(0.064)S(0.057)ENGEKS(0.879)DDGTQDLLHFPTK 153.25 2.4250999999999997e-07 1628110000.0 1119510.0 1133060.0 1038400.0 1032150.0 1102660.0 946480.0 1127300.0 1153940.0 1308000.0 996510.0 True False 1057408.5486121427 1078626.0968422676 1105336.9254987433 1130245.2256727868 1189433.068722817 940572.6672410709 1241258.4853877744 1149937.2514716196 1070500.1719967276 987681.6966730488 1.070596480803446 1.0920786529461464 1.1191226173594284 1.1443415722696446 1.2042676023352024 0.9523034297480027 1.2567393823018944 1.1642791957622782 1.0838513820825557 1.0 19.913686649222853 -4.629833107741543 2.6671602777165013 1.1251937818254336 1.0728379611457133 0.018731899947928232 0.08529315599773618 1.0780541693922285 14.483005899844077 0.022081363295127863 0.08696302160557601 2.345129837183208e-05 4.629833107741543 -0.05235582067972033 LEKHELIEFR ddPTM_KYSE-520_SHP099_60min_R1 3 LEKHELIEFR 10 1 A0A087WVQ6;Q00610-2;Q00610;J3KS13;K7EJJ5 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ;; 157.68 8.9611e-05 2014210000.0 3959530.0 3381070.0 2358440.0 1713430.0 3178860.0 2667200.0 2007360.0 1876720.0 2480460.0 2002810.0 False True 3739886.977772635 3218638.3221104606 2510468.816037422 1876273.8720384857 3429018.1967607504 2650553.0154523943 2210283.5387456813 1870210.0963497392 2030070.9913081075 1985066.6615626023 1.8840107741412953 1.6214258112504982 1.2646773353501561 0.9451943898758155 1.7274070756200701 1.335246350551238 1.1134555738323635 0.9421396936249736 1.0226714450536782 1.0 20.920756025403218 -1.0000000000000002 0.308324838916048 1.024853940520722 8.450587179558353 0.565457154274114 0.21694986195443522 45.772069911717495 0.6538471896683136 0.23362778255584732 189.23821321471536 0.09999999999999995 1.0000000000000002 7.425733239037631 LEKPAK ddPTM_KYSE-520_SHP099_60min_R1 2 LEKPAK 6 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 81.297 0.025276 48058000000.0 15997200.0 13294100.0 8701500.0 8270800.0 13226500.0 14749600.0 9639500.0 12749100.0 10769800.0 12616900.0 False True 15109803.426372405 12655431.481149068 9262412.612892259 9056854.345293308 14267350.301509358 14657542.27531367 10613954.732454052 12704876.347762309 8814275.804564511 12505124.081799654 1.2082889643905 1.0120196647683148 0.7406893807933551 0.7242514577264318 1.140920330592681 1.1721228977365137 0.8487684458806716 1.0159736332607352 0.7048531263590644 1.0 23.57601603690906 -7.715314858972331 24.999892762622153 0.8524220443647742 0.9742625863559958 0.08123788441894575 0.17355807242710938 321.93709223053924 174492.6356609532 0.12331237834695187 0.04660729723092694 1.9261279841619086e-08 7.715314858972331 0.12184054199122163 LEKPAKYDDIK ddPTM_KYSE-520_SHP099_60min_R1 2 LEKPAKYDDIK 11 2 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 120.14 0.0025024 2103650000.0 3519100.0 3238200.0 2307460.0 1665300.0 2927200.0 2442340.0 1678120.0 1909650.0 2630900.0 1983890.0 False True 3323888.5078480737 3082632.0113627077 2456202.5636665393 1823569.611309297 3157553.9865102787 2427096.4501199764 1847760.7464729308 1903025.869865662 2153194.8795918925 1966314.2780430624 1.690415690393151 1.5677209110390224 1.2491403795892837 0.9274049584404028 1.6058236578807612 1.2343380085382378 0.939707740062733 0.967813686304314 1.0950410642060837 1.0 20.907062496871422 -1.0000000000076879 0.31559740349693155 1.0030937475929993 7.767069630148903 0.5547158483418231 0.18676002780718665 44.93401217436595 0.6420838852723117 0.19110764190340454 174.59335093956142 0.09999999999822981 1.0000000000076879 6.763975882555904 LEKPAKYDDIKK ddPTM_KYSE-520_SHP099_60min_R1 2 LEKPAKYDDIKK 12 3 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 98.943 0.0034869 19983700000.0 11976900.0 10884000.0 9698100.0 5860600.0 9719800.0 7958400.0 5564500.0 5692700.0 10321600.0 5642600.0 False True 11312517.481641782 10361116.302782932 10323255.043508628 6417589.661946354 10484692.961903056 7908728.673581405 6127013.964286593 5672953.352386166 8447457.626361959 5592610.953876378 2.022761385502919 1.8526438524391518 1.845873980623187 1.1475122648211677 1.874740268610291 1.4141388948393894 1.0955551914512858 1.0143658121711652 1.5104675966252963 1.0 22.415090543052795 -1.8008561369905247 0.20770499484587898 0.979268365477262 5.063917613768661 0.6066305996586632 0.23749918964138397 25.28198981089919 0.41691962204462907 0.42249680021664104 31.755386643980803 0.01581771925234774 1.8008561369905247 4.084649248291399 LEKS(ph)PLAGNK ddPTM_KYSE-520_SHP099_60min_R1 1 LEKSPLAGNK 10 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 LEKS(1)PLAGNK 65.043 0.019875999999999998 297060000.0 370580.0 320790.0 321530.0 473800.0 420550.0 397770.0 567770.0 639300.0 686010.0 623040.0 True False 350023.18866708525 305378.7668843933 342256.33826618927 518829.80954683566 453644.8923978198 395287.36988470994 625165.732501213 637082.4175137411 561447.8769047979 617520.3503177857 0.5668204918055862 0.4945242156428376 0.5542430109227311 0.8401825288508106 0.7346233887909394 0.6401203938967984 1.0123807777014844 1.0316784170527957 0.9091973675294553 1.0 19.236127155779922 -5.962974768518277 0.5093659020562509 1.025983456091372 0.469795735251601 0.7431326844692581 0.09951822061167159 0.6011684678241274 0.3222223946214988 0.09032345261907379 0.15785029523112426 1.088993359432898e-06 5.962974768518277 -0.5561877208397711 LEKS(ph)PLAGNKDNK ddPTM_KYSE-520_SHP099_60min_R1 2 LEKSPLAGNKDNK 13 2 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 LEKS(1)PLAGNKDNK;LEKS(1)PLAGNKDNK 106.7 0.00040691 2656300000.0 1162210.0 1104610.0 1178630.0 1191390.0 1088500.0 1279700.0 1445790.0 1745400.0 2124690.0 1597150.0 True False 1097739.8944918034 1051542.8775465868 1254606.375674676 1304619.347395534 1174158.7572821935 1271712.9176193883 1591944.5627506352 1739345.6147794216 1738899.855076245 1583000.4935638986 0.693455181444953 0.6642719833770796 0.7925495795962195 0.8241433611043105 0.7417298744100473 0.8033559830144519 1.0056500735300469 1.0987650489378777 1.098483457299095 1.0 20.594230274617384 -6.772507084234879 2.574052010377217 1.0738317242645883 0.7464014544088349 0.8981982038020133 0.049663101001689226 0.08794705612369379 1.1911295385103517 0.025207986426744856 0.01674140985445753 1.6884683168763834e-07 6.772507084234879 -0.3274302698557534 LEKS(ph)PSFASEWDEIEK ddPTM_KYSE-520_SHP099_60min_R1 1 LEKSPSFASEWDEIEK 16 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 LEKS(0.926)PS(0.074)FASEWDEIEK 227.8 1.2385e-18 320100000.0 313420.0 276290.0 286920.0 281130.0 268640.0 293760.0 302000.0 308990.0 389590.0 256580.0 True False 296033.9678127197 263016.6136802553 305415.3222882318 307848.5106751837 289780.43964748643 291926.5348752609 332529.1072359693 307918.1858088084 318850.2767646833 254306.90081621925 1.1640815363742547 1.0342488262649638 1.2009714298274086 1.2105393510247584 1.1394910587066724 1.1479300559217949 1.3075897907948597 1.2108133315317802 1.2538011188108018 1.0 17.956211085651844 -4.78612598280525 24.98105964380158 1.1939204541932673 1.0991651636200033 0.13535988569448343 0.08260071391546028 323.93451727761703 327798.10242273175 0.020717160989416557 0.04315500490605013 1.6363417725210304e-05 4.78612598280525 -0.09475529057326404 LEKVPDS(ph)PENELK ddPTM_KYSE-520_SHP099_60min_R1 12 LEKVPDSPENELK 13 1 A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35;A0A0U1RR46 A0A0X1KG69 INADL InaD-like protein 1 LEKVPDS(1)PENELK;LEKVPDS(1)PENELK;LEKVPDS(1)PENELK;LEKVPDS(1)PENELK;LEKVPDS(1)PENELK;LEKVPDS(1)PENELK;LEKVPDS(1)PENELK;LEKVPDS(1)PENELK;LEKVPDS(1)PENELK;LEKVPDS(1)PENELK;LEKVPDS(1)PENELK;LEKVPDS(1)PENELK 238.05 5.4996e-16 25916468000.0 27017670.0 25256240.0 23262470.0 21702260.0 23117750.0 23232610.0 21657850.0 22396750.0 30205460.0 22414690.0 True False 25518945.98671011 24042892.320010904 24762006.037467968 23764836.26537759 24936985.40299538 23087606.663290873 23847236.838246834 22319060.901690725 24720909.88168219 22216113.284964945 1.1486683408290144 1.0822276611400905 1.1145966767385 1.0697116980160866 1.12247291338183 1.0392279858833688 1.073420743419857 1.0046339166264269 1.1127468412043253 1.0 24.405103103126613 -1.0000000001298004 0.08959274343452375 0.9536466404930761 1.438052668863453 0.4736272622526012 0.03447595266243336 132.45409442405344 0.8556552100170143 0.6086799525364844 7.887543649359076 0.09999999997011236 1.0000000001298004 0.48440602837037683 LELDGEKETAPEEPGS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 5 LELDGEKETAPEEPGSPAK 19 1 P35612 P35612 ADD2 Beta-adducin 1 LELDGEKETAPEEPGS(1)PAK;LELDGEKETAPEEPGS(1)PAK;LELDGEKETAPEEPGS(1)PAK;LELDGEKETAPEEPGS(1)PAK;LELDGEKETAPEEPGS(1)PAK 154.7 4.2777e-07 2930710000.0 3331880.0 3079400.0 2671070.0 2605590.0 2927130.0 3083760.0 2670590.0 3241840.0 3653550.0 2915860.0 True False 3147053.974461886 2931461.001726363 2843251.4460631036 2853224.490200803 3157478.477908523 3064513.1099773105 2940559.2996467124 3230594.813691143 2990157.4185004914 2890027.748904755 1.088935556295104 1.014336628026257 0.9838145834899411 0.9872654306804151 1.0925426162794198 1.0603749777623004 1.0174847977709236 1.1178421435280177 1.0346466118305206 1.0 21.462651914304484 -5.756668311777957 24.999981584219622 1.05821876746998 1.0158005619437662 0.13903197962394342 0.04186918127602251 206.124597203488 1080068.8826851791 0.0124602791637483 0.015563936006591509 1.7511836276290192e-06 5.756668311777957 -0.04241820552621367 LELKAS(ph)PNVEAPQPHR ddPTM_KYSE-520_SHP099_60min_R1 6 LELKASPNVEAPQPHR 16 1 E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494C0R9;A0A494BZW2 E9PEM5 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 LELKAS(1)PNVEAPQPHR;LELKAS(1)PNVEAPQPHR;LELKAS(1)PNVEAPQPHR;LELKAS(1)PNVEAPQPHR;LELKAS(1)PNVEAPQPHR;LELKAS(1)PNVEAPQPHR 171.68 2.1435e-08 5712180000.0 4337770.0 4448240.0 4177630.0 3875230.0 4230270.0 3685750.0 3646780.0 3967300.0 4974880.0 3896510.0 True False 4097145.250969882 4234539.873455638 4446926.71424434 4243530.694069613 4563168.18205618 3662745.8670904604 4015432.111543007 3953538.3622747767 4071567.1985191833 3861989.952838909 1.0608896711287694 1.096465792290027 1.1514599386711117 1.0987938202558598 1.1815587916539871 0.9484089580290114 1.0397313717999976 1.0237049838435162 1.0542666470497202 1.0 21.880912980373914 -6.260115632246025 24.999584923285088 1.0163607656977822 1.117456865043642 0.6280056707918596 0.04021959351419248 83.00858790219446 1567667.0442398356 0.013604081891908556 0.012893608343759692 5.493945763810365e-07 6.260115632246025 0.10109609934585984 LELQGPR ddPTM_KYSE-520_SHP099_60min_R1 5 LELQGPR 7 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ;;;; 189.62 0.00070481 1777130000.0 1577110.0 2019060.0 1430060.0 1066530.0 1718560.0 1979650.0 1391400.0 1651480.0 1644080.0 1689320.0 False True 1489624.5644091598 1922061.3269291513 1522243.9557768994 1167892.6905360622 1853800.8947311812 1967294.2700361186 1532056.2907553911 1645751.4013383284 1345556.5158840835 1674353.9390710716 0.8896712514891569 1.147942070119002 0.9091530292701658 0.6975184059255757 1.1071738486545244 1.174957232237032 0.9150134000970984 0.9829172691237482 0.8036272884039056 1.0 20.675173098507877 -7.633153578165309 18.63122777362324 0.8988717155286197 0.9808711563515781 0.044262488879235784 0.1410416498716686 6.100122205657133 1004.3271239516513 0.09841058629752979 0.037194453713306166 2.327268127766278e-08 7.633153578165309 0.0819994408229584 LELQSLEAAEIEPEAQAQRS(ph)PRPTGSDLLPGAPILSLR ddPTM_KYSE-520_SHP099_60min_R1 2 LELQSLEAAEIEPEAQAQRSPRPTGSDLLPGAPILSLR 38 2 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 LELQS(0.011)LEAAEIEPEAQAQRS(0.984)PRPT(0.002)GS(0.002)DLLPGAPILSLR;LELQSLEAAEIEPEAQAQRS(0.913)PRPT(0.043)GS(0.043)DLLPGAPILSLR 90.581 0.00059679 134338000.0 26814.0 45960.0 34562.0 22146.0 37327.0 38057.0 28859.0 34675.0 57931.0 31580.0 True False 25326.573967616216 43752.01261263353 36789.921821155236 24250.74918156232 40264.422538422106 37819.47214647262 31776.349356698123 34554.72051820585 47412.19072166854 31300.225768868215 0.8091498813662391 1.3978177964502125 1.1753883851453613 0.7747787303720527 1.2863939971471339 1.2082811295274607 1.0152115065030447 1.103976718039351 1.514755550703586 1.0 14.933885442919863 LELSSSAS(ph)PQEER ddPTM_KYSE-520_SHP099_60min_R1 4 LELSSSASPQEER 13 0 A0A075B6T1;Q9C0C7-6;Q9C0C7-3;Q9C0C7-4;Q9C0C7-2;Q9C0C7;Q9C0C7-5 A0A075B6T1 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 1 LELSS(0.015)S(0.102)AS(0.884)PQEER;LELS(0.007)S(0.073)S(0.319)AS(0.602)PQEER;LELS(0.013)S(0.154)S(0.196)AS(0.636)PQEER;LELS(0.001)S(0.024)S(0.08)AS(0.896)PQEER 155.37 3.1270999999999997e-06 1816830000.0 3153180.0 2898340.0 2847800.0 2763630.0 2867140.0 2978930.0 2967600.0 2742420.0 3534270.0 3063870.0 True False 2978266.819691504 2759099.3959029666 3031373.744641106 3026284.5642843433 3092767.6062049367 2960337.392892025 3267593.9689849797 2732907.185105639 2892535.6596963922 3036726.495454794 0.9807491139387136 0.9085768507742253 0.9982373286426356 0.9965614515544685 1.018454447851666 0.9748449184748432 1.0760251125268396 0.8999517043092636 0.9525176745504679 1.0 21.534085546509264 -4.786291147805011 24.939655559003135 0.9898434210596333 0.9446629417674859 0.13447436968050686 0.045571624831639124 387.167645291999 388536.4593986278 0.012065490090335118 0.025133839327146662 1.6357195794833237e-05 4.786291147805011 -0.04518047929214741 LENEGS(ph)DEDIETDVLYSPQMALK ddPTM_KYSE-520_SHP099_60min_R1 14 LENEGSDEDIETDVLYSPQMALK 23 0 O60502;O60502-3 O60502 MGEA5 Protein O-GlcNAcase 1 LENEGS(1)DEDIETDVLYSPQMALK;LENEGS(1)DEDIETDVLYSPQMALK;LENEGS(0.998)DEDIET(0.002)DVLYSPQMALK;LENEGS(1)DEDIETDVLYSPQMALK;LENEGS(1)DEDIETDVLYSPQMALK;LENEGS(1)DEDIETDVLYSPQMALK;LENEGS(1)DEDIETDVLYSPQMALK;LENEGS(1)DEDIETDVLYSPQMALK;LENEGS(1)DEDIETDVLYSPQMALK;LENEGS(1)DEDIETDVLYSPQMALK;LENEGS(1)DEDIETDVLYSPQMALK;LENEGS(1)DEDIETDVLYSPQMALK;LENEGS(0.994)DEDIET(0.006)DVLYSPQMALK;LENEGS(0.991)DEDIET(0.009)DVLYSPQMALK 287.57 2.2225e-48 4347959000.0 5484870.0 5124265.0 4414725.0 4014875.0 4263479.0 4518803.0 4074955.0 4426329.0 5509662.0 4537284.0 True False 5180613.327282725 4878087.617721427 4699305.237309745 4396447.512883818 4598990.541422821 4490599.474312142 4486891.2191283135 4410975.097811957 4509246.268076327 4497087.193713532 1.1519930799929103 1.0847216003595606 1.0449664493672466 0.977621140864158 1.0226598558844355 0.9985573507646328 0.997732760307723 0.98085158410494 1.0027037666469514 1.0 22.10055942591696 -4.525288104066174 1.2575539168616723 0.9964213591373771 1.181840706544258 0.9316675413642768 0.013543386663664584 0.20545563929333574 0.39761798512861424 0.0040825707245358625 0.043908053451998164 2.9834028202286714e-05 4.525288104066174 0.18541934740688093 LENGELEHIRPK ddPTM_KYSE-520_SHP099_60min_R1 2 LENGELEHIRPK 12 1 M0QZT2;M0R389;M0R1K3;Q15102;M0QXS6;M0R323 M0QZT2 PAFAH1B3 Platelet-activating factor acetylhydrolase IB subunit gamma 0 ; 215.53 9.9441e-11 1377020000.0 2094270.0 1715870.0 1295280.0 1080190.0 1962300.0 1824390.0 1415030.0 1579590.0 1476910.0 1484760.0 False True 1978096.6682762576 1633437.0296266223 1378775.8213212774 1182850.9328290352 2116721.846040284 1813003.3052868922 1558075.0417619657 1574110.7709690793 1208740.3738713206 1471606.1815258004 1.344175291670299 1.1099688558884901 0.936919019932171 0.8037822534848447 1.4383752070445983 1.2319894602556793 1.0587581523655412 1.0696549054564308 0.8213748957061776 1.0 20.488960210844116 -7.601490935527077 5.057170203840612 0.9125881233920154 1.1228962204821058 0.19185270643821428 0.17817111711682582 0.37980859851373416 17.059434176169674 0.13591928623195756 0.0485199127742908 2.5032778955538148e-08 7.601490935527077 0.21030809709009035 LENS(ph)PLGEALR ddPTM_KYSE-520_SHP099_60min_R1 2 LENSPLGEALR 11 0 D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;D6RDK6;D6RBN5;Q9NX40-3;Q9NX40-2;Q9NX40-4;Q9NX40 D6RI08 OCIAD1 OCIA domain-containing protein 1 1 LENS(1)PLGEALR;LENS(1)PLGEALR 209.22 1.4662999999999998e-09 870400000.0 671580.0 769450.0 644320.0 604620.0 666570.0 673520.0 588230.0 668030.0 878200.0 685190.0 True False 634326.1186384615 732484.4670320038 685853.8981484507 662082.9030143677 719025.2667355009 669316.3118504417 647694.0289715698 665712.7598493737 718741.0176204339 679119.7496697535 0.9340416310185728 1.0785792452482803 1.0099159956428478 0.9749133394166926 1.0587606487444268 0.9855644931191015 0.9537258035663585 0.9802582831276819 1.0583420935261385 1.0 19.373306462783344 LENSALLTVEPS(ph)PQDK ddPTM_KYSE-520_SHP099_60min_R1 1 LENSALLTVEPSPQDK 16 0 O75509 O75509 TNFRSF21 Tumor necrosis factor receptor superfamily member 21 1 LENSALLTVEPS(1)PQDK 175.51 2.2494e-08 77172000.0 166660.0 191350.0 148420.0 190510.0 215510.0 246880.0 219420.0 312730.0 389340.0 286580.0 True False 157415.03757152654 182157.25877779434 157987.39068039635 208616.0131210798 232469.41091583445 245339.13034451363 241601.1149328357 311645.21262173034 318645.6704626961 284041.12415586604 0.5541980515650469 0.6413059352554756 0.5562130876291759 0.7344570746262885 0.8184357515366969 0.8637451040712157 0.8505849836034954 1.0971834221114993 1.1218293527378134 1.0 18.11574029614064 -6.224888034247604 0.641214767678063 1.0867116991869277 0.5564260687681315 0.8906316815231521 0.06468062939604455 0.24680911804098096 0.22279549376503494 0.052347343376812266 0.05836755493064854 5.958157313841963e-07 6.224888034247604 -0.5302856304187962 LENSALLTVEPS(ph)PQDKNK ddPTM_KYSE-520_SHP099_60min_R1 1 LENSALLTVEPSPQDKNK 18 1 O75509 O75509 TNFRSF21 Tumor necrosis factor receptor superfamily member 21 1 LENSALLTVEPS(1)PQDKNK 172.61 9.1112e-09 502410000.0 496440.0 509400.0 450500.0 442800.0 499240.0 584500.0 521650.0 707130.0 1088800.0 502100.0 True False 468901.4835713957 484927.6593750117 479539.9508254853 484883.57886732504 538527.3477129654 580851.9186907341 574383.4728133891 704677.1310753835 891101.3664144032 497651.7846278892 0.9422280760472082 0.974431669601282 0.9636054077130523 0.9743430925901102 1.0821368763213424 1.1671854429800876 1.154187507320756 1.4160044288845341 1.7906122191055927 1.0 18.924777091614853 -6.807282978627624 1.3087619044248586 1.440365497021072 0.9803934775854288 0.4609293487036177 0.1869044864379058 0.36615134825758827 1.253802142538105 0.11802168538796617 0.06548799113943013 1.5585366569012294e-07 6.807282978627624 -0.45997201943564314 LENTS(ph)PMVK ddPTM_KYSE-520_SHP099_60min_R1 1 LENTSPMVK 9 0 A0A088AWL3;O75376-2;O75376;E7EVK1;J3QKP0;J3KS29 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 LENT(0.005)S(0.995)PMVK 135.5 0.00048584 466600000.0 946030.0 920700.0 709300.0 631390.0 680380.0 797920.0 667770.0 793080.0 927700.0 845660.0 True False 893551.830035949 876468.1900011257 755022.6129201271 691397.1157656743 733922.0351673497 792939.8853066046 735274.7084071622 790328.9905862638 759253.0654138868 838168.1103135243 1.0660771020048805 1.0456949855480364 0.9008009295864337 0.8248907435849009 0.8756262927884714 0.94603919613453 0.8772401375806652 0.9429241948737875 0.90584818972638 1.0 19.676880106895876 -4.743655879472958 5.95026588437765 0.9028436407165927 1.0586625590939627 0.6249408434282393 0.04530491416679054 0.09416320980607801 11.046650211174397 0.011669430438103798 0.029530254479710607 1.8044469584070798e-05 4.743655879472958 0.15581891837736994 LENVSQLSLDKS(ph)PTEK ddPTM_KYSE-520_SHP099_60min_R1 7 LENVSQLSLDKSPTEK 16 1 Q86W56-3;Q86W56-2;Q86W56 Q86W56-3 PARG Poly(ADP-ribose) glycohydrolase 1 LENVS(0.001)QLS(0.023)LDKS(0.806)PT(0.171)EK;LENVSQLSLDKS(0.989)PT(0.011)EK;LENVSQLSLDKS(1)PTEK;LENVSQLS(0.012)LDKS(0.986)PT(0.002)EK;LENVSQLSLDKS(0.986)PT(0.014)EK;LENVSQLSLDKS(0.99)PT(0.01)EK;LENVSQLSLDKS(0.98)PT(0.02)EK 273.78 1.6569999999999998e-29 11119150000.0 13503130.0 12543720.0 11308170.0 10688160.0 11841140.0 12784050.0 11056010.0 12942080.0 15984740.0 13070020.0 True False 12754084.46107769 11941100.862692423 12037112.73191173 11703959.512887528 12772970.351129536 12704260.001947448 12173659.387059445 12897186.945184188 13082314.15850382 12954229.791121691 0.984549808574403 0.9217916506990153 0.9292032738342717 0.9034855565792844 0.9860077022783412 0.9807036162547029 0.9397439742347925 0.9955965852962869 1.0098874552518677 1.0 23.626919905158978 -6.9145601402864365 0.7310958501127948 1.0067215961029352 0.9378067189572665 0.42687354051579085 0.027102350501772256 0.6780999004137178 0.697560883821652 0.024675526590797144 0.014118724301756274 1.217418395352784e-07 6.9145601402864365 -0.06891487714566868 LEPGGFGEKPVRPGGGDT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 LEPGGFGEKPVRPGGGDTSPR 21 2 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 LEPGGFGEKPVRPGGGDT(0.5)S(0.5)PR;LEPGGFGEKPVRPGGGDT(0.5)S(0.5)PR 72.033 0.032173 1121400000.0 1707260.0 1385820.0 1325280.0 1261810.0 1478460.0 1251480.0 1383750.0 1495190.0 1624820.0 1427320.0 True False 1612554.884461567 1319243.127041771 1410709.6693229717 1381732.0430229916 1594806.390713304 1243669.049107065 1523632.9540985858 1490003.5348699694 1329793.6463789959 1414675.0552381559 1.1398765239343949 0.9325414498240947 0.9971969634295159 0.976713371672749 1.1273305377147713 0.8791199395946777 1.0770197357032547 1.0532479026564388 0.9399993598919644 1.0 20.43203927960212 -4.241229293255644 23.749000050181262 1.0018792601712183 1.1398767857679541 0.2706526162901687 0.0695617263333033 3325.029247437739 3907143.8299393 0.016488460743316898 0.609136609158063 5.7381342753094636e-05 4.241229293255644 0.13799752559673584 LEPNS(ph)PMHGGTLLEDVVGGR ddPTM_KYSE-520_SHP099_60min_R1 11 LEPNSPMHGGTLLEDVVGGR 20 0 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 LEPNS(0.999)PMHGGT(0.001)LLEDVVGGR;LEPNS(0.994)PMHGGT(0.006)LLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(0.997)PMHGGT(0.003)LLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR;LEPNS(1)PMHGGTLLEDVVGGR 224.08 2.9846e-19 1674406000.0 576292.0 602297.0 498598.0 486753.0 476563.0 694881.0 539578.0 683171.0 781994.0 731975.0 True False 544323.9339503797 573361.7480537719 530738.4248650065 533013.8587723747 514065.79682744556 690543.98992598 594123.8100138071 680801.2392543098 640003.6020645342 725490.2709679323 0.7502842639421688 0.7903093549260226 0.7315582938926356 0.7346947024682219 0.7085771062671742 0.9518308067793552 0.8189273292681664 0.9384016112938366 0.8821670361073984 1.0 19.46859674190536 -6.259824421344454 24.999999999669225 0.9082068331834465 0.7446018587491727 0.7637091528566577 0.04855636274577824 73.24550184748863 1133866.3138849915 0.015836769569614408 0.015051289715972173 5.497630897933415e-07 6.259824421344454 -0.1636049744342738 LEPQELS(ph)PLSATVFPK ddPTM_KYSE-520_SHP099_60min_R1 7 LEPQELSPLSATVFPK 16 0 Q3T8J9-3;Q3T8J9;A0A087WUE6;Q3T8J9-2;Q9H869-7;Q9H869-5;Q9H869-6;Q9H869-4;Q9H869-3;Q9H869-2;Q9H869;Q9H869-8;Q9H869-9 Q3T8J9-3;Q9H869-7 GON4L;YY1AP1 GON-4-like protein;YY1-associated protein 1 1 LEPQELS(1)PLSATVFPK;LEPQELS(1)PLSATVFPK;LEPQELS(1)PLSATVFPK;LEPQELS(0.999)PLS(0.001)ATVFPK;LEPQELS(1)PLSATVFPK;LEPQELS(0.999)PLS(0.001)ATVFPK;LEPQELS(0.999)PLS(0.001)ATVFPK 280.54 4.5426999999999996e-37 2354610000.0 1885354.0 2386807.0 1667397.0 1430747.0 1566237.0 2185036.0 1602052.0 2078370.0 2407908.0 2260379.0 True False 1780769.655259979 2272141.209049654 1774880.0785495283 1566724.764710231 1689490.9412304943 2171398.3798260484 1764003.0506807927 2071160.619565206 1970692.6056210245 2240353.8006082494 0.7948609075836617 1.014188566302686 0.7922320474862736 0.6993202432066176 0.7541179168985731 0.9692211914191947 0.7873769983124411 0.9244792581434648 0.8796345492778808 1.0 21.09529515253435 -8.029271050857233 0.7371331848604472 0.9978598394525181 0.8284500624017219 0.23862896728481342 0.09191450498521606 1.1986116618963458 1.4894878405416834 0.09466606200876918 0.03648313494409401 9.348220530870094e-09 8.029271050857233 -0.16940977705079618 LEPTAPALS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 10 LEPTAPALSPR 11 0 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR;LEPTAPALS(1)PR 181.44 2.6875e-06 45306320000.0 22572590.0 22639720.0 18265740.0 14469370.0 16777720.0 22139340.0 17185120.0 20741990.0 25812310.0 21533310.0 True False 21320443.435357444 21552073.868287448 19443178.826617338 15844534.574425299 18098031.111831546 22001160.16688879 18922359.640208624 20670040.877906844 21125445.17938295 21342541.626061685 0.9989645942319608 1.009817586203974 0.9110057821264826 0.7423921129935765 0.8479791877145401 1.0308594239789537 0.8866029159855197 0.9684901283109767 0.9898279946933014 1.0 24.347228657289158 -7.462584863401109 1.17913703602158 1.0030319195449915 0.9123911900652992 0.12824598274503718 0.0806916433914736 1.1139954359320021 2.7580571710597708 0.08138659401667965 0.028787995224647187 3.44679247874072e-08 7.462584863401109 -0.09064072947969226 LEPTNVQTVTCS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 LEPTNVQTVTCSPR 14 0 J3KTI7;J3QR52;J3QLN7;Q99741 J3KTI7 CDC6 Cell division control protein 6 homolog 1 LEPTNVQTVTCS(1)PR;LEPTNVQTVT(0.041)CS(0.959)PR;LEPTNVQTVT(0.004)CS(0.996)PR;LEPTNVQTVT(0.001)CS(0.999)PR;LEPTNVQTVT(0.005)CS(0.995)PR 191.37 8.798500000000001e-11 1663670000.0 1841080.0 2139550.0 1759630.0 1423610.0 1631890.0 1955440.0 1568510.0 1643880.0 1933190.0 1876650.0 True False 1738951.6222980088 2036762.806469979 1873058.5653075431 1558909.466376048 1760310.458816021 1943235.373626362 1727070.2979824184 1638177.763964477 1582171.4277540944 1860024.3410116087 0.9349079923073736 1.0950194368758894 1.0070075557660958 0.8381124010066482 0.9463910874728895 1.0447365288614974 0.9285202671289341 0.8807292075938767 0.8506186681909771 1.0 20.826890070456923 -5.027990627140162 23.979253939234177 0.9274161960686816 1.0239761655378445 0.23837932103403192 0.06958931199231833 551.2801565207022 472276.29258411407 0.019348914275659213 0.0336337707330774 9.375822414268325e-06 5.027990627140162 0.0965599694691629 LEPVS(ph)PPS(ph)PPHTDPELELVPPR ddPTM_KYSE-520_SHP099_60min_R1 12 LEPVSPPSPPHTDPELELVPPR 22 0 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J330;H7C1Y3;H0YGK8 C9JE98 NCOR2 Nuclear receptor corepressor 2 2 LEPVS(1)PPS(0.986)PPHT(0.014)DPELELVPPR;LEPVS(1)PPS(0.999)PPHT(0.001)DPELELVPPR;LEPVS(1)PPS(0.997)PPHT(0.003)DPELELVPPR;LEPVS(1)PPS(0.999)PPHT(0.001)DPELELVPPR;LEPVS(1)PPS(1)PPHTDPELELVPPR;LEPVS(0.999)PPS(0.981)PPHT(0.02)DPELELVPPR;LEPVS(1)PPS(0.998)PPHT(0.002)DPELELVPPR;LEPVS(1)PPS(1)PPHTDPELELVPPR;LEPVS(1)PPS(1)PPHTDPELELVPPR;LEPVS(1)PPS(0.998)PPHT(0.002)DPELELVPPR;LEPVS(0.999)PPS(0.99)PPHT(0.011)DPELELVPPR;LEPVS(1)PPS(1)PPHTDPELELVPPR 155.87 1.1343e-07 6806330000.0 3228399.0 3079240.0 2977581.0 2858043.0 2833700.0 2864711.0 2768188.0 2912625.0 3653955.0 2951794.0 True False 3049313.271816149 2931308.6883665333 3169520.6355580483 3129670.5474180384 3056696.068452508 2846831.2760384106 3048023.4579514056 2902521.783686782 2990488.880709712 2925643.401620978 1.042270999304512 1.0019364242212214 1.0833584960497742 1.0697375304468129 1.0447944772623072 0.9730616091014712 1.04183013427495 0.9920969117694297 1.0221645191115245 1.0 21.48032250350839 -6.092823298054364 9.818316554102443 1.007633341414125 1.0494745841884816 0.4019707091343463 0.025973242652382118 0.4966833915208979 49.71953400076349 0.008678103275973903 0.008683372766584546 8.075635378131058e-07 6.092823298054364 0.041841242774356635 LEQEILDFIGNNES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 LEQEILDFIGNNESPR 16 0 Q15032-2;Q15032-4;Q15032;Q15032-3;H7C2F9 Q15032-2 R3HDM1 R3H domain-containing protein 1 1 LEQEILDFIGNNES(1)PR;LEQEILDFIGNNES(1)PR;LEQEILDFIGNNES(1)PR 174.02 2.6875e-08 78529000.0 92735.0 102156.0 155139.0 68516.0 105301.0 88442.0 90944.0 89966.0 141153.0 98592.0 True False 87590.80468736058 97248.27242071793 165139.50817117654 75027.74003991348 113587.58961926722 87890.00067210583 100137.50704790726 89653.92894422224 115523.17337756448 97718.5515834154 0.8963579920910976 0.9951874116523715 1.6899504290156064 0.7677942296951424 1.1623953464179781 0.8994198056351701 1.0247543114925006 0.9174709151075682 1.182203087393805 1.0 16.576344859211616 LEQGEEPWIMGGEFPCQHS(ph)PEAWR ddPTM_KYSE-520_SHP099_60min_R1 5 LEQGEEPWIMGGEFPCQHSPEAWR 24 0 I3L0D1;Q9NYW8 I3L0D1 RBAK-RBAKDN;RBAK RB-associated KRAB zinc finger protein 1 LEQGEEPWIMGGEFPCQHS(1)PEAWR;LEQGEEPWIMGGEFPCQHS(1)PEAWR;LEQGEEPWIMGGEFPCQHS(1)PEAWR;LEQGEEPWIMGGEFPCQHS(1)PEAWR;LEQGEEPWIMGGEFPCQHS(1)PEAWR 236.31 1.5967e-28 578503000.0 333540.0 355267.0 299776.0 327426.0 314532.0 315523.0 355569.0 352284.0 426068.0 345746.0 True False 315037.8713044945 338199.44005336164 319100.040618559 358544.46859578375 339283.8789577249 313553.7039196861 391513.38453902747 351062.009027704 348704.7915002307 342682.9594263178 0.9193275085282804 0.9869164215796958 0.9311815246161096 1.0462862501129895 0.9900809760885594 0.9149964866785419 1.1424944654220806 1.0244513167955989 1.017572604380428 1.0 18.38651492727322 -4.801261114793849 0.50829647757407 1.0333561175661525 0.898034368496423 0.23549778310905978 0.05667952394794598 4.106876395214474 1.2016649459823239 0.03900003093566213 0.3119087265571511 1.580297616974215e-05 4.801261114793849 -0.1353217490697295 LEQLCEEFS(ph)EEER ddPTM_KYSE-520_SHP099_60min_R1 7 LEQLCEEFSEEER 13 0 Q9H3C7-3;Q9H3C7 Q9H3C7-3 GGNBP2 Gametogenetin-binding protein 2 1 LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER;LEQLCEEFS(1)EEER 282.06 5.2074e-30 1309000000.0 1779180.0 1682910.0 1556240.0 1418710.0 1540680.0 1526180.0 1491840.0 1628140.0 1919260.0 1610490.0 True False 1680485.3386925994 1602060.4775005917 1656557.720472041 1553543.7718492833 1661922.7507299308 1516654.5445122735 1642649.7461553263 1622492.3623507342 1570770.7646073701 1596222.311542262 1.0527890297867863 1.003657489258303 1.037798875816667 0.9732627846482468 1.0411599554226185 0.9501524527914219 1.0290858198619002 1.0164576391512095 0.9840551364613487 1.0 20.606230164132597 -1.0000006844837668 0.7869272048616013 1.0016230333643608 12.002842210634554 0.2265827659295292 0.027406836308399816 715.0814633151209 2.62781318345209 0.00926223678481274 14005.327877818105 0.09999984239191242 1.0000006844837668 11.001219177270194 LEQLESGEEELVLAEYES(ph)DEEKK ddPTM_KYSE-520_SHP099_60min_R1 14 LEQLESGEEELVLAEYESDEEKK 23 1 F5GXJ8;F6WZM0;F5H235;C9K0E8;B4DMS8;Q96FC9-5;Q96FC9-4;Q96FC9-3;Q96FC9-2;A8MPP1;Q96FC9 F5GXJ8 DDX11;DDX11L8 Probable ATP-dependent RNA helicase DDX11;Putative ATP-dependent RNA helicase DDX11-like protein 8 1 LEQLESGEEELVLAEY(0.442)ES(0.558)DEEKK;LEQLESGEEELVLAEY(0.142)ES(0.858)DEEKK;LEQLESGEEELVLAEYES(1)DEEKK;LEQLESGEEELVLAEYES(1)DEEKK;LEQLESGEEELVLAEYES(1)DEEKK;LEQLESGEEELVLAEYES(1)DEEKK;LEQLESGEEELVLAEYES(1)DEEKK;LEQLESGEEELVLAEY(0.001)ES(0.999)DEEKK;LEQLESGEEELVLAEYES(1)DEEKK;LEQLESGEEELVLAEYES(1)DEEKK;LEQLESGEEELVLAEYES(1)DEEKK;LEQLESGEEELVLAEYES(1)DEEKK;LEQLESGEEELVLAEYES(1)DEEKK;LEQLESGEEELVLAEYES(1)DEEKK 256.01 8.692999999999999e-30 3798360000.0 3115579.0 3139738.0 2707320.0 3011411.0 2714160.0 3021345.0 2898420.0 3236090.0 3635604.0 3302833.0 True False 2942751.6221172404 2988900.2736371807 2881838.179065155 3297614.596026269 2927748.9505420667 3002487.6651439783 3191420.5794532364 3224864.759099086 2975469.9597186507 3273572.469185188 0.8989419509780119 0.9130392871312044 0.8803343155505159 1.007344308723083 0.8943589849015321 0.9171899181725816 0.9749045147143482 0.9851209311708851 0.9089366396276125 1.0 21.642434486474777 -1.0000000206260506 0.07822920881817172 1.0503608299266833 0.6469626326445944 0.3045530702524373 0.03811649696597548 255.48479954260273 1.4637149338217017 1.1687543126813884 11.171065697407919 0.09999999525067643 1.0000000206260506 -0.4033981972820889 LEQTSVRDPS(ph)PEADAPVLGS(ph)PEKEEAASEPPAAAPDAAPPPPDRPIEK ddPTM_KYSE-520_SHP099_60min_R1 3 LEQTSVRDPSPEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK 48 3 O15234 O15234 CASC3 Protein CASC3 2 LEQT(0.031)S(0.028)VRDPS(0.942)PEADAPVLGS(1)PEKEEAASEPPAAAPDAAPPPPDRPIEK;LEQT(0.121)S(0.104)VRDPS(0.775)PEADAPVLGS(1)PEKEEAASEPPAAAPDAAPPPPDRPIEK;LEQT(0.042)S(0.037)VRDPS(0.921)PEADAPVLGS(1)PEKEEAASEPPAAAPDAAPPPPDRPIEK 258.78 3.525e-43 2360940000.0 514011.0 474280.0 505873.0 503570.0 499690.0 490745.0 501726.0 525981.0 634640.0 533326.0 True False 485497.7851744756 451494.8768912063 538482.3830054182 551429.1413961594 539012.760152815 487682.078422385 552445.360453887 524156.4946758887 519405.37397248024 528601.146561349 0.9184576846507636 0.8541314747958197 1.0186931801195447 1.0431856702985054 1.0196965399322258 0.9225898990095833 1.0451081388068284 0.9915916718789324 0.982603570482794 1.0 19.011820028694725 -4.7664552120986725 24.99999993060162 1.0033063638229183 0.8862945671055481 0.6260029420478724 0.036061060499577524 69.22030966112932 345016.08757751115 0.009447548218149226 0.020689079726608713 1.712161739335429e-05 4.7664552120986725 -0.11701179671737016 LEQTSVRDPS(ph)PEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK ddPTM_KYSE-520_SHP099_60min_R1 2 LEQTSVRDPSPEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK 48 3 O15234 O15234 CASC3 Protein CASC3 1 LEQT(0.079)S(0.067)VRDPS(0.854)PEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK;LEQT(0.003)S(0.002)VRDPS(0.995)PEADAPVLGSPEKEEAASEPPAAAPDAAPPPPDRPIEK 154.66 1.2697e-09 1717120000.0 560780.0 581850.0 464970.0 383420.0 417045.0 533700.0 442209.0 536480.0 663770.0 562270.0 True False 529672.4155127848 553897.0526253448 494942.710178304 419860.1215205739 449864.0688385417 530368.9803340364 486911.8012639432 534619.0760953735 543246.1002800212 557288.7252394406 0.9504452387498235 0.9939139758970748 0.8881261862343448 0.7533978394057406 0.8072369823115593 0.9516951560542732 0.8737155072619498 0.959321536364607 0.974801885766869 1.0 19.08806544033141 -7.46177110930212 1.5962399890566348 0.9962290619303382 0.8844150331527192 0.2763181574881154 0.06684860694904414 0.605763188626496 2.730290443915161 0.06618678475851414 0.022390411289122277 3.4532569194280546e-08 7.46177110930212 -0.11181402877761903 LERLVPT(ph)AVY(ph)QHMKMHKR ddPTM_KYSE-520_SHP099_60min_R1 5 LERLVPTAVYQHMKMHKR 18 3 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 2 LERLVPT(1)AVY(1)QHMKMHKR;LERLVPT(1)AVY(1)QHMKMHKR;LERLVPT(1)AVY(1)QHMKMHKR;LERLVPT(1)AVY(1)QHMKMHKR;LERLVPT(1)AVY(1)QHMKMHKR 47.808 0.038597 5098965000.0 4320527.0 5376282.0 5487500.0 6193818.0 6714360.0 3568859.0 5017552.0 5844402.0 7095880.0 4593061.0 True False 4080858.7545529557 5117997.342756196 5841233.030310439 6782476.600480717 7242741.932517472 3546584.4271799717 5524775.122748512 5824129.13355568 5807447.064578088 4552370.05288738 0.8964250944328737 1.1242489699426041 1.2831191143183946 1.489878134177355 1.5909826855845561 0.7790632980134204 1.2136041355522877 1.2793619731905748 1.2756974931980023 1.0 22.118186405476173 -6.250692999197773 24.98727986519112 1.1335091591185493 1.2806226401688554 0.1175951944932988 0.2243970436569723 2061.0127029475257 4792232.416440408 0.08027871541231295 0.07945821104464688 5.614447185168097e-07 6.250692999197773 0.14711348105030608 LERT(ph)PNGPNIDKK ddPTM_KYSE-520_SHP099_60min_R1 1 LERTPNGPNIDKK 13 2 Q92598-2;Q92598-3;Q92598;Q92598-4;A0A0A0MSM0;Q5TBM3 Q92598-2 HSPH1 Heat shock protein 105 kDa 1 LERT(1)PNGPNIDKK 70.281 0.053021000000000006 2272000000.0 826770.0 845080.0 715070.0 598220.0 784690.0 723890.0 636310.0 712040.0 968840.0 663500.0 True False 780907.4199748668 804481.0883090601 761164.5563524535 655074.6489385985 846440.6387246348 719371.933996639 700634.4245871512 709570.0994313861 792923.0784688925 657621.9061951895 1.1874717259541607 1.2233185675999687 1.1574501232118801 0.9961265626455045 1.2871235443203162 1.0938989824087786 1.0654061520560039 1.0789940127401685 1.205743104052778 1.0 19.326898832204545 -13.999999988821182 0.021797080170793844 2.3878948206336496e-07 1.9028726629729118 0.23705803529636593 0.0810428426883126 4133.013807801836 6.798619089943444 410.89380120907555 212.6925888457573 1.0000000257401797e-14 13.999999988821182 1.9028724241834298 LES(ph)GREDER ddPTM_KYSE-520_SHP099_60min_R1 1 LESGREDER 9 1 K7EJ48;K7ENU5;Q96ED9-2;Q96ED9 K7EJ48 HOOK2 Protein Hook homolog 2 1 LES(1)GREDER 66.595 0.043164999999999995 63496000.0 182330.0 169250.0 154950.0 140970.0 140280.0 150040.0 135330.0 155300.0 183760.0 150130.0 True False 172215.7914341562 161118.97595057066 164938.32492876568 154367.74641582384 151319.2379159819 149103.54470548785 149010.4770935224 154761.3005472924 150393.81621262894 148799.96499937243 1.157364461980099 1.082789071564971 1.1084567454667165 1.0374178946646586 1.0169306015402633 1.0020401866769035 1.0014147321482962 1.040062748320842 1.0107113682000075 1.0 17.18301466153304 -5.085453795167645 1.0803385807464503 1.0105274407490041 1.142003898847106 0.8615009711636283 0.01893643937085354 0.22935754812486478 0.46681648677542636 0.006804599989374186 0.02530357400202871 8.21383935681535e-06 5.085453795167645 0.13147645809810182 LES(ph)LNIQR ddPTM_KYSE-520_SHP099_60min_R1 6 LESLNIQR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 LES(1)LNIQR;LES(1)LNIQR;LES(1)LNIQR;LES(1)LNIQR;LES(1)LNIQR;LES(1)LNIQR 199.17 2.8643000000000003e-06 2917960000.0 4601840.0 4297210.0 4491060.0 3635570.0 3835170.0 4305870.0 3488440.0 4259150.0 5035830.0 4878110.0 True False 4346566.76165939 4090765.581356293 4780560.913550071 3981093.4797260235 4136976.059867668 4278995.4681486245 3841085.5590935284 4244376.002743083 4121450.2149436404 4834893.7405121485 0.8989994392718482 0.84609213788491 0.9887623534501253 0.8234086814293288 0.8556498409062137 0.8850236836219199 0.794450874257818 0.8778633472704793 0.8524386338441153 1.0 22.205052752362228 -3.8374986980539587 16.169865814674754 0.8747446007973418 11.192504842440504 0.0005593658380825817 0.06290464046948392 686.2937578791953 68322.35288930472 0.01439942548623244 121.31119472107835 0.00014537887438294253 3.8374986980539587 10.317760241643162 LES(ph)LSYQLSGLQK ddPTM_KYSE-520_SHP099_60min_R1 2 LESLSYQLSGLQK 13 0 Q03252 Q03252 LMNB2 Lamin-B2 1 LES(0.999)LS(0.001)YQLSGLQK;LES(1)LSYQLSGLQK 126.71 6.1045e-05 175644000.0 284365.0 307625.0 251105.0 217000.0 288919.0 371808.0 241091.0 307169.0 370213.0 350844.0 True False 268590.70658242627 292846.2332454613 267291.63008220546 237623.61475657116 311655.2815757595 369487.4083568252 265462.83110141417 306103.5024327835 302991.6515102637 347735.7951125016 0.7723987876931973 0.842151533898654 0.7686629729784639 0.6833452813786217 0.8962415890343728 1.062552125924472 0.7634038106877379 0.8802760795268461 0.8713271850895821 1.0 18.40763205681233 -5.864759728242542 8.685327135718921 0.9072606297715581 0.7724311662895235 0.42625512275471533 0.08262811904350924 0.28724260070478813 21.850419537967387 0.026200469856929302 0.029751585650582488 1.3653382958540044e-06 5.864759728242542 -0.13482946348203462 LES(ph)PSFTGTGDTEIAHATEDLENNGSKK ddPTM_KYSE-520_SHP099_60min_R1 1 LESPSFTGTGDTEIAHATEDLENNGSKK 28 1 Q08J23-2;Q08J23;Q08J23-3 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 1 LES(0.909)PS(0.077)FT(0.006)GT(0.008)GDTEIAHATEDLENNGSKK 157.2 9.928499999999999e-08 339300000.0 185730.0 225570.0 211770.0 338650.0 211420.0 198710.0 171660.0 183430.0 238140.0 170620.0 True False 175427.18665642428 214733.27861252744 225421.0330439802 370835.1941811649 228057.55118475138 197469.77718226827 189013.068040154 182793.72414288388 194899.77902087226 169108.43954035136 1.0373650607459197 1.2697963460380073 1.3329969435983824 2.1928840168422172 1.3485876388229225 1.167710953510097 1.1177033420325138 1.0809260888441172 1.1525136152318807 1.0 17.36758913524436 -6.2241155014993055 4.064375545803084 1.1061001724027963 1.469159024310089 0.2616070935768908 0.2813577957435839 0.3343655866558049 12.328215937193699 0.10492160202301716 0.10139028206929523 5.968765249495035e-07 6.2241155014993055 0.3630588519072926 LES(ph)TSPK ddPTM_KYSE-520_SHP099_60min_R1 3 LESTSPK 7 0 Q03111 Q03111 MLLT1 Protein ENL 1 LES(0.333)T(0.333)S(0.333)PK;LES(0.431)T(0.285)S(0.285)PK;LES(0.496)T(0.338)S(0.166)PK 69.812 0.036539 2683700000.0 9694800.0 7470300.0 6963000.0 7954400.0 8251500.0 8494300.0 10103100.0 6387800.0 9054800.0 8555000.0 True False 9157010.117895333 7111415.574851103 7411846.121193906 8710383.784422427 8900846.105387261 8441283.922899405 11124419.944754045 6365642.212723722 7410676.572932696 8479209.355689282 1.0799367881807598 0.8386885234859272 0.8741199574487204 1.0272636774297872 1.0497259510894226 0.995527244204151 1.3119642973893446 0.7507353511035291 0.87398202616148 1.0 23.015498316211126 -3.858831421094266 18.32949149016571 0.9733523502288025 42.317889408107376 0.04886423226098935 0.1456068115967289 1094.1688098505722 142149.3773349293 0.03628366066695888 1083.240358338409 0.00013841035384104666 3.858831421094266 41.344537057878576 LESLLR ddPTM_KYSE-520_SHP099_60min_R1 1 LESLLR 6 0 O00141-3 O00141-3 0 154.34 0.051276999999999996 3497100000.0 2408100.0 2845600.0 1874500.0 1700800.0 2578200.0 2762900.0 2086900.0 2613000.0 2239900.0 2606000.0 False True 2274517.8925716644 2708893.10466732 1995333.269306042 1862443.5206358356 2781089.6720486484 2745655.7162542837 2297864.2181812744 2603936.1128787845 1833190.6232840014 2582912.8674373236 0.8806018666933825 1.0487744820269487 0.7725128069402288 0.7210632399240349 1.0767260897995172 1.063007486961195 0.8896406251834331 1.0081393552630056 0.7097376943662949 1.0 21.300567545402487 LESLSETPGPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 LESLSETPGPSSPR 14 0 A0A2R8YFR7;A0A2R8YF49;H0Y895;Q12774-2;C9J591;Q12774 A0A2R8YFR7;Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 LESLSETPGPS(0.5)S(0.5)PR;LES(0.001)LS(0.005)ET(0.003)PGPS(0.496)S(0.496)PR 108.06 0.00035617 7848300000.0 4514300.0 4695900.0 4010400.0 3289600.0 3540200.0 4517500.0 3690200.0 4203600.0 5152200.0 4503500.0 True False 4263882.779966056 4470301.915310402 4268916.800866876 3602242.594945695 3818793.5990173854 4489304.606818462 4063241.4288813705 4189018.6927276114 4216690.3563926155 4463602.493669981 0.9552559364353892 1.0015009001473412 0.9563837297162556 0.8070258496481673 0.8555406993416135 1.0057581545814014 0.910305394497745 0.9384838140645884 0.9446832154907338 1.0 22.089777122937075 -8.438973315061638 0.9239360792587817 1.0002035854596654 0.9259826776455985 0.12245878469526539 0.05764484831129685 3.64313368814088 5.0821805315763635 0.06227892584727862 0.020337054590903455 3.639373973338616e-09 8.438973315061638 -0.07422090781406687 LESLSETPGPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 LESLSETPGPSSPR 14 0 A0A2R8YFR7;A0A2R8YF49;H0Y895;Q12774-2;C9J591;Q12774 A0A2R8YFR7;Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 LESLSETPGPS(0.001)S(0.999)PR;LESLSETPGPS(0.151)S(0.848)PR;LESLSETPGPS(0.019)S(0.981)PR;LESLSETPGPSS(1)PR;LESLS(0.001)ET(0.002)PGPS(0.325)S(0.672)PR 328.41 2.1186999999999995e-43 10521500000.0 6170520.0 6371200.0 5105040.0 4156720.0 4600380.0 5635530.0 4597070.0 5485610.0 6758420.0 5668250.0 True False 5828228.954973339 6065117.988633831 5434119.046752798 4551773.4190365635 4962403.733418339 5600356.566876289 5061786.698679664 5466581.699260995 5531261.293903775 5618033.714831766 1.0374143785550187 1.0795802048360355 0.967263516487374 0.8102075655081519 0.883299030462821 0.9968534991328357 0.9009890213574914 0.973041810843724 0.9845546635473351 1.0 22.42163385168714 -4.885737972973461 5.048622983902884 0.9303804635795101 1.0569990557175653 0.41458782162871943 0.057138416505681924 0.18987356427315238 7.532320406016077 0.01578982863208106 0.03443377296521442 1.3009542584198154e-05 4.885737972973461 0.12661859213805515 LESLYS(ph)DEEDESAVGADK ddPTM_KYSE-520_SHP099_60min_R1 9 LESLYSDEEDESAVGADK 18 0 Q9UP95-3;Q9UP95-5;Q9UP95-2;Q9UP95-6;Q9UP95;I3L4N6;Q9UP95-7 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 LESLYS(1)DEEDESAVGADK;LES(0.022)LY(0.004)S(0.974)DEEDESAVGADK;LESLYS(1)DEEDESAVGADK;LESLYS(1)DEEDESAVGADK;LESLYS(1)DEEDESAVGADK;LESLYS(1)DEEDESAVGADK;LESLYS(1)DEEDESAVGADK;LESLYS(1)DEEDESAVGADK;LESLYS(1)DEEDESAVGADK 401.36 2.2123999999999995e-87 6402510000.0 5516274.0 5343274.0 4219869.0 4911860.0 5151540.0 5583830.0 5546801.0 6183540.0 6319200.0 5519408.0 True False 5210275.284800402 5086575.096622218 4491888.507769129 5378681.6975954445 5556936.88974692 5548979.245753422 6107525.776640995 6162090.742989084 5171792.574068598 5470510.339154447 0.9524294739941449 0.9298172896623074 0.8211095911142031 0.9832138802660235 1.0157986266791028 1.0143439828707286 1.1164453401956296 1.1264197233820659 0.9453948998235473 1.0 22.383243996386526 -5.633170300634111 2.5297531606791113 1.048357117315081 0.9037315957377385 0.49100280537242547 0.060346949467670954 0.2281980950131467 2.9636888920468687 0.019635023762614244 0.026986399269895756 2.327178518247777e-06 5.633170300634111 -0.14462552157734243 LESLYS(ph)DEEDESAVGADKIQMTWTR ddPTM_KYSE-520_SHP099_60min_R1 5 LESLYSDEEDESAVGADKIQMTWTR 25 1 Q9UP95-3;Q9UP95-5;Q9UP95-2;Q9UP95-6;Q9UP95;I3L4N6;Q9UP95-7 Q9UP95-3 SLC12A4 Solute carrier family 12 member 4 1 LES(0.015)LY(0.059)S(0.925)DEEDES(0.001)AVGADKIQMTWTR;LESLYS(1)DEEDESAVGADKIQMTWTR;LESLYS(1)DEEDESAVGADKIQMTWTR;LESLYS(0.999)DEEDES(0.001)AVGADKIQMTWTR;LESLYS(1)DEEDESAVGADKIQMTWTR 231.07 1.6006e-22 941400000.0 875152.0 990007.0 878639.0 740607.0 830489.0 773681.0 615914.0 773324.0 1153634.0 765706.0 True False 826605.573987739 942445.5776891971 935277.475812107 810994.0666083852 895843.7594639714 768852.169896604 678176.5978613737 770641.5195391783 944163.1463465389 758922.4405502533 1.0891832021575385 1.2418206753853283 1.232375570728925 1.0686125791989727 1.1804154306129675 1.0130839843649257 0.8936046183713646 1.0154417347053648 1.244083842957625 1.0 19.533592928785108 -6.262055240924055 24.772316920740273 1.0254805518656802 1.1655572918508816 0.31081674971707174 0.09582025033801111 61.92333803287531 2490752.2658373145 0.03394481963858679 0.03174747861698598 5.469463885687005e-07 6.262055240924055 0.14007673998520143 LESPTVSTLTPSS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 2 LESPTVSTLTPSSPGK 16 0 A0A087WTV6;A0A087WZR9;Q96C36 A0A087WTV6 PYCR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 1 LESPTVSTLTPS(0.018)S(0.982)PGK;LESPTVSTLTPS(0.007)S(0.993)PGK 228.84 1.9277e-15 0.0 665200.0 785540.0 554580.0 553250.0 586410.0 817860.0 599380.0 670370.0 943230.0 735470.0 True False 628300.0299566758 747801.4792804216 590329.1141593738 605830.7136593218 632557.1307835104 812755.4323702366 659971.1797850832 668044.6429355341 771963.2088933296 728954.3079870018 0.8619196334701944 1.0258550791001784 0.8098300643692747 0.8310955940878045 0.8677596439896336 1.114960736859695 0.905367006620189 0.9164424101976035 1.0590008186179685 1.0 19.475468861408103 LESS(ph)EGEIIQTVDR ddPTM_KYSE-520_SHP099_60min_R1 2 LESSEGEIIQTVDR 14 0 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 LES(0.006)S(0.994)EGEIIQTVDR;LES(0.04)S(0.96)EGEIIQTVDR 257.83 1.3778999999999999e-24 199413000.0 232930.0 213056.0 171226.0 164390.0 188278.0 184737.0 175976.0 205102.0 224630.0 201960.0 True False 220008.908565557 202820.46995642438 182263.50193128648 180013.57617434417 203094.40744471917 183583.9878582891 193765.37144025482 204390.5490331665 183842.85446148732 200170.79152250235 1.0991059529323215 1.0132370882573254 0.9105399471370786 0.8992999168617856 1.0146056070417655 0.9171367433877153 0.9680002260393348 1.0210807854561028 0.9184299720412531 1.0 17.61087194911073 -4.42576222649938 3.370803359143053 0.9560403771339794 1.098191060280387 0.5144909316817409 0.042755143271257116 0.20810234552918022 4.0129829175742975 0.010898459832126322 0.05862649630691787 3.751783538178648e-05 4.42576222649938 0.14215068314640766 LESTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 LESTSPK 7 0 Q03111 Q03111 MLLT1 Protein ENL 1 LEST(0.003)S(0.996)PK;LES(0.001)T(0.005)S(0.994)PK;LES(0.174)T(0.201)S(0.625)PK;LES(0.03)T(0.019)S(0.951)PK 123.5 0.0023695 6203250000.0 24821300.0 18356300.0 17890300.0 20112100.0 20997300.0 21607700.0 26609300.0 16625900.0 22898900.0 22445100.0 True False 23444413.00896518 17474435.794631954 19043537.3634921 22023547.93707666 22649668.05170548 21472838.329330675 29299227.725741982 16568228.633414222 18741036.994293474 22246253.876023553 1.0538589166346326 0.7855001517116307 0.856033445883522 0.9899890588236557 1.0181340273256845 0.9652338973112932 1.3170409673927144 0.7447648815727594 0.8424356342751301 1.0 24.40705908031303 -3.9371445462973154 20.367484006422295 0.9496456142142758 3.041514221269796 0.04219086510114789 0.15272630034117046 1263.9430173140263 500124.46977555414 0.03802141664913773 26050.8500859116 0.00011557275172093422 3.9371445462973154 2.0918686070555204 LET(ph)PPSK ddPTM_KYSE-520_SHP099_60min_R1 2 LETPPSK 7 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3;A0A0A0MSW3;H0Y837;E9PKD2;B7ZAV2 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 1 LET(1)PPSK;LET(0.999)PPS(0.001)K 133.57 0.008924 1282200000.0 2555000.0 2793200.0 2186500.0 1796480.0 2001240.0 2745200.0 2133130.0 2668200.0 3029400.0 2824000.0 True False 2413269.0567337754 2659010.4793213224 2327445.2885236964 1967216.9190685907 2158726.2025019918 2728066.188519767 2348767.5977425934 2658944.6369625633 2479337.324959397 2798981.5570387514 0.8621954119936933 0.9499921400462836 0.8315329133451211 0.7028331123231316 0.7712541717444781 0.9746638671695962 0.839150794629575 0.9499686163618943 0.885799807692363 1.0 21.41647055010553 -6.2612670611372865 24.999999944881633 0.9211167914413776 0.8243211899880661 0.3458748992882186 0.07262445350564554 22.65156033824144 3286503.978068421 0.026876360667401258 0.02527609718161216 5.479399160635437e-07 6.2612670611372865 -0.09679560145331145 LETHVPS(ph)PGLTHPAK ddPTM_KYSE-520_SHP099_60min_R1 1 LETHVPSPGLTHPAK 15 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 LETHVPS(0.998)PGLT(0.002)HPAK 116.06 0.0001051 610670000.0 704970.0 606220.0 547690.0 545710.0 502630.0 624370.0 545720.0 631380.0 875300.0 603290.0 True False 665863.9087771468 577096.281245228 582994.973734984 597574.1143263053 542184.1214265042 620473.075231708 600886.7033139517 629189.8901451997 716367.5845173824 597945.3199525173 1.1135866216496568 0.9651321985278773 0.9749971348237655 0.9993791980406479 0.9067453215781653 1.0376752765302681 1.0049191510716533 1.0522532230792667 1.1980486519641445 1.0 19.189654035381622 -7.434917289453281 3.7858379065404657 1.1058777611265953 0.9960842601630349 0.2526794224691996 0.0672123834869903 0.27455442787134815 7.195871211652548 0.04105018833219884 0.017207775193733794 3.6735225536523374e-08 7.434917289453281 -0.10979350096356044 LETLGSASTS(ph)TPGRR ddPTM_KYSE-520_SHP099_60min_R1 1 LETLGSASTSTPGRR 15 1 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 LETLGS(0.005)AS(0.038)T(0.084)S(0.602)T(0.271)PGRR 144.15 9.764199999999999e-06 683220000.0 447490.0 510720.0 417910.0 385310.0 302910.0 398710.0 383600.0 472290.0 545530.0 467720.0 True False 422666.8376508009 486184.24459365074 444849.1472796416 421929.7465523239 326747.2936778591 396221.5029960349 422378.03157522436 470651.7362233142 446475.503692183 463576.3646806541 0.9117523451437505 1.0487684050255035 0.9596027346780003 0.9101623350512715 0.7048402778319964 0.8547060057062698 0.9111293494572136 1.0152625804111781 0.963111016239468 1.0 18.82244748722803 -9.479662725779782 10.352793432015122 0.9999999843196303 0.9188963870608711 0.06725991894687422 0.08938299349986656 0.0 0.0 0.09678781628491234 0.023474493518562987 3.31388378650097e-10 9.479662725779782 -0.08110359725875926 LETLGSASTST(ph)PGRR ddPTM_KYSE-520_SHP099_60min_R1 1 LETLGSASTSTPGRR 15 1 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 LETLGSAS(0.003)T(0.012)S(0.244)T(0.74)PGRR 95.205 0.0031384 648880000.0 166040.0 223300.0 150490.0 153570.0 160580.0 155440.0 109040.0 208830.0 164440.0 110110.0 True False 156829.43020746615 212572.33281986666 160190.82619251354 168165.24662749606 173216.73242478186 154469.84130245977 120062.82732784789 208105.61747128837 134581.84119506256 109134.51106428383 1.4370287517491918 1.9478012110637903 1.4678292377940454 1.5408988869564935 1.587185673308707 1.4154078283401292 1.1001362094995497 1.9068726788788863 1.233173996773481 1.0 16.735747864532918 -12.032035645636373 0.13340873551761956 2.2254193290847338e-14 1.7762483324547045 0.3371013886507074 0.23812165712800967 88.67381013847226 1.23969512459425 27.565366579574125 1.871957359692433 9.28890143031722e-13 12.032035645636373 1.7762483324546823 LETVVCTGS(ph)VPVDK ddPTM_KYSE-520_SHP099_60min_R1 1 LETVVCTGSVPVDK 14 0 A0A087WX11;J3KNG8;Q8TF40-3;Q8TF40 A0A087WX11 FNIP1 Folliculin-interacting protein 1 1 LETVVCT(0.32)GS(0.68)VPVDK 94.48700000000001 0.0020305 106130000.0 168140.0 216730.0 190190.0 159620.0 178700.0 206100.0 187200.0 210660.0 263240.0 237480.0 True False 158812.93902121982 206317.96548163766 202449.95171475914 174790.23680849708 192762.6733360848 204813.65345108678 206124.00289593873 209929.26962841378 215442.25174038133 235376.1119566443 0.6747198672840375 0.8765458982500353 0.8601125663595375 0.7425997283899949 0.8189559753268045 0.8701547992636268 0.8757218444236442 0.8918885943153069 0.915310606286441 1.0 17.844608384828295 -2.031319423954323 0.0456185824542607 1.391593030284064 2.2840985978380584e-11 0.6342198013472069 0.051867853717830446 342.132325702115 1.4259915697264218 12.194666871415803 37.554028260159676 0.00930423296632432 2.031319423954323 -1.391593030261223 LEVAPISDIIAIKS(ph)PDTFVR ddPTM_KYSE-520_SHP099_60min_R1 2 LEVAPISDIIAIKSPDTFVR 20 1 H0YK49;H0YL12;H0YNX6;H0YKF0;H0YLU7;P13804-2;P13804 H0YK49 ETFA Electron transfer flavoprotein subunit alpha, mitochondrial 1 LEVAPISDIIAIKS(1)PDTFVR;LEVAPISDIIAIKS(1)PDTFVR 156.88 1.5194e-07 180938000.0 293900.0 371060.0 283620.0 258720.0 307310.0 325400.0 258170.0 304030.0 412410.0 287420.0 True False 277596.7811248749 353233.7206275852 301902.59900804475 283308.67101299553 331493.54864528397 323369.0578989984 284268.3430963913 302975.39089113544 337526.74001006904 284873.68240937655 0.9744556912981368 1.239966140922671 1.059777078930713 0.9945062970255988 1.163651011359177 1.1351313858270073 0.9978750605957508 1.0635429300757446 1.184829490584629 1.0 18.119962821225833 -10.16077661137196 4.373609269110313 0.9999805541102346 1.0910486813136977 0.09323967469998529 0.08456701099390758 55791206.020292 0.41057500070031616 10926.026448922608 0.01984424124414702 6.905949347293645e-11 10.16077661137196 0.09106812720346313 LEVFTT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 LEVFTTPK 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LEVFT(0.045)T(0.955)PK;LEVFT(0.012)T(0.988)PK;LEVFT(0.182)T(0.818)PK;LEVFT(0.038)T(0.962)PK;LEVFT(0.012)T(0.988)PK 137.95 0.0031717 1599873000.0 6309160.0 6361280.0 4374200.0 4130490.0 4565510.0 6005160.0 5410620.0 6416240.0 5724650.0 6965870.0 True False 5959178.317801354 6055674.560324058 4656167.930967459 4523050.527722898 4924789.662801502 5967679.568939002 5957578.272162517 6393983.561001666 4685197.866682779 6904157.811164855 0.8631289261906275 0.8771054668726289 0.6744005653286017 0.6551198062721829 0.7133078063246938 0.8643602496003996 0.8628971751671717 0.9261062298810471 0.6786052687130427 1.0 22.719034010489782 -6.274739518690574 23.201762164730177 0.8615569090214076 0.7531007549243998 0.22754742893246915 0.10083397178106603 507.70723513515946 885678.3495270652 0.03671485123354066 0.03260484269175379 5.312029538130824e-07 6.274739518690574 -0.10845615409700782 LEVNGRES(ph)EEENLNK ddPTM_KYSE-520_SHP099_60min_R1 1 LEVNGRESEEENLNK 15 1 O95793-2;O95793-3;O95793;Q5JW30;A0A087X1A5;Q5JW28 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 LEVNGRES(1)EEENLNK 146.78 0.0002705 0.0 144100.0 129070.0 139960.0 140330.0 125740.0 109270.0 128900.0 138700.0 137230.0 123230.0 True False 136106.48574377186 122869.28346198038 148982.04554391775 153666.9210082469 135635.0226372652 108588.00539835157 141930.46994276982 138218.8820728234 112312.49128678204 122138.27807148935 1.114363882419455 1.0059850638312025 1.219781774364924 1.2581389179099394 1.1105038058410814 0.889057935914189 1.1620474120299602 1.1316590036738676 0.9195519460413866 1.0 16.89815588548684 -6.012005102019644 24.847000800578183 1.033345388766153 1.1493261579156007 0.2716048379082696 0.09984124892372746 862.8879135863425 1785924.363145831 0.03356590801451895 0.03538962782205281 9.727357961708157e-07 6.012005102019644 0.11598076914944766 LEVPAERS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 LEVPAERSPR 10 1 Q9UJF2-2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LEVPAERS(1)PR;LEVPAERS(1)PR 102.87 0.0026669000000000003 1324120000.0 1151830.0 1184210.0 1071060.0 972440.0 1061570.0 1015040.0 949550.0 949760.0 1346490.0 964030.0 True False 1087935.6937838201 1127318.7740645502 1140102.2413565917 1064860.4052252541 1145109.519492935 1008704.7588500299 1045539.7807149482 946465.5042356495 1102001.3582506678 955489.4442039897 1.1386161305949019 1.1798338337517795 1.1932128065594712 1.1144659019361334 1.1984533439266993 1.0556942988421745 1.0942452447352558 0.9905556884766445 1.1533370304982657 1.0 19.865880409514293 -6.271520429543571 24.863203637399987 1.0603936007267083 1.1645143661189732 0.5427833655523848 0.04870003011963113 493.1631379295981 1216299.4570803272 0.015908368079750764 0.014185332224929275 5.351549790809102e-07 6.271520429543571 0.10412076539226489 LEVSVDGLTLSPDPEERPGAEGAPLLPPPLPPPS(ph)PPGSGR ddPTM_KYSE-520_SHP099_60min_R1 1 LEVSVDGLTLSPDPEERPGAEGAPLLPPPLPPPSPPGSGR 40 1 Q9H3P7 Q9H3P7 ACBD3 Golgi resident protein GCP60 1 LEVSVDGLTLSPDPEERPGAEGAPLLPPPLPPPS(0.829)PPGS(0.171)GR 59.29600000000001 0.016131 72215000.0 29319.0 39943.0 30160.0 24143.0 32268.0 45140.0 32158.0 41986.0 47522.0 42937.0 True False 27692.616624022525 38024.07832433466 32104.161857706215 26437.543461142366 34807.30802019463 44858.26451616716 35408.84447183545 41840.36036560606 38893.202732131904 42556.611584480524 0.6507241905067795 0.8934940285095728 0.7543871718728168 0.621232341504923 0.8179060015409709 1.0540844970027172 0.832040972095351 0.9831694490654499 0.9139168106681551 1.0 15.377095665612382 -6.009255428968184 23.75803541717727 0.9464909234556762 0.7404082792071128 0.601688784075721 0.08707558368840836 170.50186496533223 437668.6967744595 0.02722763746711528 0.029255602991470293 9.789140707542677e-07 6.009255428968184 -0.20608264424856337 LEVTEIVKPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 LEVTEIVKPSPK 12 1 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LEVT(0.005)EIVKPS(0.995)PK;LEVTEIVKPS(1)PK;LEVTEIVKPS(1)PK;LEVTEIVKPS(1)PK;LEVTEIVKPS(1)PK;LEVTEIVKPS(1)PK;LEVTEIVKPS(1)PK;LEVTEIVKPS(1)PK 168.1 1.6634e-06 24176130000.0 19552480.0 17617290.0 15818250.0 14045790.0 14716560.0 16214440.0 15109200.0 17523460.0 20339920.0 16715480.0 True False 18467864.957497463 16770928.944308573 16837919.70509487 15380697.658579262 15874669.546227694 16113239.665518858 16636585.387581805 17462675.207266327 16646703.255657274 16567393.85164665 1.1147115305441913 1.0122852812267569 1.0163288116326958 0.9283715831413375 0.9581874909462537 0.9725874696892864 1.0041763681454507 1.054038756103495 1.0047870778422245 1.0 23.981843340215978 -4.148552914378527 1.9061065083197468 0.9903206907822087 1.1796701179497957 0.5643135974747133 0.032159830499675524 0.9561356558584799 2.857993744688432 0.009798985887231415 0.35229218831365655 7.103086208281417e-05 4.148552914378527 0.18934942716758696 LEVVTMPSPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 LEVVTMPSPSPK 12 0 H3BTN9;Q96DP5-2;Q96DP5 H3BTN9 MTFMT Methionyl-tRNA formyltransferase, mitochondrial 1 LEVVT(0.016)MPS(0.021)PS(0.964)PK;LEVVT(0.002)MPS(0.002)PS(0.996)PK 57.019 0.052330999999999996 1448470000.0 216040.0 2038640.0 1179870.0 903190.0 2260980.0 1510230.0 2705400.0 2928700.0 6451400.0 1119170.0 True False 204055.83053493712 1940700.6743389755 1255926.3080587478 989028.9060460255 2438906.2627835516 1500804.0943786246 2978888.234159574 2918541.0232637175 5279988.386559402 1109255.0245010855 0.18395754450309226 1.749553196941211 1.1322250342058457 0.8916154393719021 2.198688497156467 1.3529838145683837 2.6854854549785805 2.6310820855433152 4.7599409242560835 1.0 20.081159657353965 -6.641230596834188 1.248458533634548 3.027619381904833 1.1370506918169243 0.3579833606489766 0.9841392617908647 0.46637735512958745 1.4783486102321477 0.5666110549011273 0.3636042843242665 2.2843855437763635e-07 6.641230596834188 -1.8905686900879088 LEYDDLRR ddPTM_KYSE-520_SHP099_60min_R1 1 LEYDDLRR 8 1 P15924 P15924 DSP Desmoplakin 0 124.92 0.0021554 191640000.0 441200.0 380570.0 283480.0 217640.0 404880.0 357640.0 259680.0 296950.0 373780.0 310000.0 False True 416725.75648960465 362286.84595278365 301753.57438403665 238324.4401641477 436741.75254792377 355407.8361001776 285930.98863257124 295919.9497586511 305910.97422701656 307253.6411763503 1.3562923286901654 1.1791132712560652 0.9820992624489132 0.7756602631353676 1.421437190706075 1.1567245704215718 0.9306024414807804 0.9631129142219208 0.9956301023994599 1.0 18.229070582108587 -4.471443817085528 3.1580419880366866 1.0337411971563064 1.350400633483819 0.29411937519730547 0.15945032540244247 0.37087364690392777 6.73113021391367 0.04366064874091534 0.22058890185006513 3.377195352217782e-05 4.471443817085528 0.3166594363275126 LFAPQQILQCS(ph)PAN ddPTM_KYSE-520_SHP099_60min_R1 3 LFAPQQILQCSPAN 14 0 K7ERV3;P04183 K7ERV3 TK1 Thymidine kinase;Thymidine kinase, cytosolic 1 LFAPQQILQCS(1)PAN;LFAPQQILQCS(1)PAN;LFAPQQILQCS(1)PAN 128.88 4.3788e-05 177397000.0 513830.0 663850.0 698130.0 404953.0 462963.0 580570.0 428746.0 506002.0 571990.0 616960.0 True False 485326.8256052891 631957.6495408354 743132.5768474938 443439.61136644136 499395.5542008609 576946.4472784937 472087.8298377251 504246.79716375406 468131.03469450166 611494.214387617 0.7936736181409686 1.0334646423003555 1.215273275466239 0.7251738461835252 0.8166807509388823 0.9435027081266479 0.7720233793389184 0.8246141750805178 0.7655526801072241 1.0 19.221979323289588 -5.280996826463698 24.959863751677 0.8291443219721132 1.0160699685831787 0.3082161729717767 0.12247719648616878 894.6007880704985 1141717.410090339 0.03428352229190873 0.0509352113786255 5.236042627247722e-06 5.280996826463698 0.18692564661106548 LFDANKDR ddPTM_KYSE-520_SHP099_60min_R1 1 LFDANKDR 8 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YXP8;A0A2R8Y6C7;K7ERC6;A0A0J9YYH3;A0A0J9YX90;K7EP41;K7EPY4;K7ERK8;A0A2R8YF08;K7ELR7;A0A0J9YYI8;K7EIL4;A0A0J9YXM3;A0A0J9YXH9;K7ENA0 P06744-2 GPI Glucose-6-phosphate isomerase 0 82.426 0.0090808 951430000.0 4486200.0 4383000.0 3062100.0 2704800.0 3907800.0 3795300.0 2823300.0 3282500.0 3842200.0 3434300.0 False True 4237341.542982013 4172434.1009828765 3259487.8655332257 2961863.3787722248 4215321.627659491 3771612.1249049506 3108706.716752689 3271113.773641261 3144553.3339799936 3403874.7738449676 1.2448582349566208 1.2257895422720724 0.9575816039352574 0.8701446367918367 1.23838916168409 1.1080349235775768 0.9132846897423136 0.9609970962434256 0.9238158107761267 1.0 21.698746531590103 -4.7534752697272316 24.641486263778464 1.0002712227427968 1.2353240783573576 0.47133999916901437 0.10109645523214504 137.67880723876434 425975.4545383298 0.027855952270388083 0.07086732914564388 1.764106216099966e-05 4.7534752697272316 0.2350528556145608 LFDDEAS(ph)VDEPR ddPTM_KYSE-520_SHP099_60min_R1 2 LFDDEASVDEPR 12 0 A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35;A0A0U1RR46;Q8NI35-5 A0A0X1KG69 INADL InaD-like protein 1 LFDDEAS(1)VDEPR;LFDDEAS(1)VDEPR 155.66 9.1664e-06 1043230000.0 1480690.0 1343500.0 1311240.0 1291060.0 1332290.0 1288290.0 1204060.0 1456050.0 1610160.0 1419390.0 True False 1398553.1740176647 1278956.2433653865 1395764.6284581777 1413761.954228656 1437133.6433068411 1280249.3042430894 1325778.1352931845 1450999.3023946239 1317795.5328304681 1406815.308868709 0.9941270650106244 0.9091145335871128 0.9921448961062147 1.0049378516967753 1.0215510410264959 0.9100336740524968 0.9423967218264844 1.0314071031551721 0.9367224855479955 1.0 20.42400150879497 LFDEEEDS(ph)S(ph)EKLFDDS(ph)DER ddPTM_KYSE-520_SHP099_60min_R1 2 LFDEEEDSSEKLFDDSDER 19 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 3 LFDEEEDS(1)S(1)EKLFDDS(1)DER;LFDEEEDS(1)S(1)EKLFDDS(1)DER 105.84 0.0016257 246910000.0 592130.0 464820.0 372270.0 491840.0 472990.0 530420.0 496250.0 567240.0 496490.0 504400.0 True False 559283.3685181087 442489.3494909561 396267.1198530603 538584.3257229124 510211.6220550351 527109.4520306914 546415.7929332777 565272.3768348111 406339.9314943851 499931.40841726196 1.1187202066154431 0.8851001198181121 0.7926429769787949 1.077316441125438 1.0205632482070277 1.0543635449900473 1.0929815245318975 1.1306998666565335 0.812791364280994 1.0 18.93137064227521 -5.306540830029626 24.999888574413795 1.0360315137647307 0.9274485777044366 0.12985643361262222 0.1105307307802159 757.157260777656 419693.2078201809 0.030898431986124023 0.04582994566340287 4.936955014740238e-06 5.306540830029626 -0.10858293606029412 LFDEEEDS(ph)SEKLFDDSDER ddPTM_KYSE-520_SHP099_60min_R1 4 LFDEEEDSSEKLFDDSDER 19 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFDEEEDS(0.5)S(0.5)EKLFDDSDER;LFDEEEDS(0.971)S(0.029)EKLFDDSDER;LFDEEEDS(0.5)S(0.5)EKLFDDSDER;LFDEEEDS(0.525)S(0.475)EKLFDDSDER 223.97 4.2621e-19 333201000.0 771130.0 632720.0 595620.0 624830.0 664420.0 663760.0 658920.0 688330.0 723040.0 668720.0 True False 728353.8816904561 602323.1814679176 634014.6182256956 684213.6553380097 716706.0739673272 659617.22763073 725530.0640394866 685942.343887429 591754.1623551334 662795.6610562874 1.0989116623510926 0.9087615035198093 0.9565762956493652 1.03231462657373 1.081337908617452 0.9952045047783024 1.094651197449332 1.0349228038008775 0.8928153835709544 1.0 19.338204632528665 -3.9156855224265597 17.49983763507253 1.0056596518874072 3.8861862592128293 0.17642609215497929 0.06315624370150368 195.83390682341116 42176.3296971673 0.015784524562369843 827.8611969680849 0.00012142677973203893 3.9156855224265597 2.880526607325422 LFDFPGR ddPTM_KYSE-520_SHP099_60min_R1 2 LFDFPGR 7 0 Q9P258 Q9P258 RCC2 Protein RCC2 0 ; 131.3 0.011059000000000001 199050000.0 1192970.0 1220850.0 824300.0 694350.0 1105870.0 1162170.0 926720.0 872660.0 908370.0 992620.0 False True 1126793.5759732632 1162198.5334667903 877435.6969266323 760340.815236061 1192895.6774604144 1154916.4659449267 1020401.9015156219 869632.9461403755 743432.9061442416 983826.1590466747 1.14531776331819 1.181304768916653 0.8918605069180774 0.7728406164487733 1.2125065658106993 1.1739029861373458 1.03717703796816 0.8839294809796964 0.7556547458187393 1.0 19.90804388996276 -7.264215265608968 4.6136028133031886 0.8613994567271961 1.0577824203527537 0.2519310515216465 0.14131356427795438 0.2879664185993868 17.146075309746703 0.08249091214251163 0.041408315331985156 5.442328275151933e-08 7.264215265608968 0.19638296362555763 LFDFVNAK ddPTM_KYSE-520_SHP099_60min_R1 1 LFDFVNAK 8 0 Q08945;A0A0U1RRK2 Q08945 SSRP1 FACT complex subunit SSRP1 0 133.12 0.0072435 0.0 231940.0 262990.0 175430.0 139410.0 240030.0 231910.0 159510.0 173700.0 201190.0 195750.0 False True 219073.82583907316 250355.5656439619 186738.49849792445 152659.48448485526 258918.9954161187 230462.5636673535 175634.82746758105 173097.47524188494 164658.96758717278 194015.80729119555 1.129154520436927 1.2903874645028628 0.9624911552575265 0.7868404467463356 1.3345252586945706 1.187854571671346 0.9052604007877216 0.8921823312163705 0.8486884130015163 1.0 17.56581467412539 -6.775836639117457 24.12690869884 0.9025478357926429 1.1112729216934965 0.3030504582446587 0.15100104474866238 216.0508715244761 362053.038061032 0.06737341209072405 0.045681573413699564 1.6755730282059428e-07 6.775836639117457 0.2087250859008536 LFDHPES(ph)PTPNPTEPLFLAQAEVYK ddPTM_KYSE-520_SHP099_60min_R1 5 LFDHPESPTPNPTEPLFLAQAEVYK 25 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 LFDHPES(0.5)PT(0.5)PNPT(0.001)EPLFLAQAEVYK;LFDHPES(0.5)PT(0.5)PNPT(0.001)EPLFLAQAEVYK;LFDHPES(0.5)PT(0.5)PNPTEPLFLAQAEVYK;LFDHPES(0.5)PT(0.5)PNPTEPLFLAQAEVYK;LFDHPES(0.5)PT(0.5)PNPT(0.001)EPLFLAQAEVYK 237.97 9.260899999999999e-29 2044518000.0 916730.0 962811.0 700074.0 584018.0 655899.0 959295.0 615601.0 764247.0 937220.0 756440.0 True False 865877.1594440517 916556.1143512262 745201.8901980051 639522.8951285863 707514.5197451853 953307.6840725878 677831.9567667883 761596.0055335915 767044.4733935571 749738.5301014147 1.1549055099608223 1.2225010154236662 0.9939490372693053 0.8529945700430791 0.9436816854663747 1.2715201977729982 0.9040911325113572 1.0158154809391655 1.023082638276309 1.0 19.516028020584 -4.7665663752640866 24.994516700071564 1.0001252410891766 1.1887032870250525 0.3380395567072576 0.10526493180465651 130.71344035621777 637250.6608872098 0.02835773404426371 0.06203977847531154 1.711723545966516e-05 4.7665663752640866 0.1885780459358759 LFDHPESPT(ph)PNPTEPLFLAQAEVYK ddPTM_KYSE-520_SHP099_60min_R1 3 LFDHPESPTPNPTEPLFLAQAEVYK 25 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 LFDHPES(0.199)PT(0.801)PNPTEPLFLAQAEVYK;LFDHPES(0.173)PT(0.827)PNPTEPLFLAQAEVYK;LFDHPES(0.422)PT(0.578)PNPTEPLFLAQAEVYK 358.32 1.4880999999999997e-85 1961150000.0 1690730.0 1849590.0 1333440.0 1184560.0 1214890.0 1571710.0 1113020.0 1375620.0 1676870.0 1578500.0 True False 1596941.8365133037 1760732.9201088091 1419395.6759794336 1297140.2262490487 1310494.931221466 1561900.3748937787 1225534.9236284064 1370848.2952921225 1372392.678452717 1564515.7180544175 1.0207259780676479 1.1254172136400145 0.9072428353385604 0.8291001562209496 0.8376361554559236 0.9983283369221172 0.7833318064406812 0.8762125426242865 0.8771996743883028 1.0 20.577284722147336 -4.842330020173874 5.938786485335276 0.8787965628718378 1.072026166963921 0.5295620096582181 0.06934202997194269 0.13017771123765148 7.293173131948278 0.017377164120473975 0.03743686715376682 1.4377056511984814e-05 4.842330020173874 0.19322960409208323 LFDQAFGLPR ddPTM_KYSE-520_SHP099_60min_R1 2 LFDQAFGLPR 10 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 0 ; 178.22 0.00015261 304990000.0 314760.0 514900.0 284190.0 314980.0 558610.0 540740.0 352630.0 315590.0 384610.0 285600.0 False True 297299.63534149644 490163.4311193431 302509.34212007694 344915.60449780995 602569.4289438743 537365.0410826819 388277.28173715156 314495.29194925964 314774.5192290993 283069.80619343807 1.0502696820244202 1.731599133481534 1.0686740001982222 1.2184824977839885 2.12869552230556 1.8983481435510965 1.3716661870740785 1.1110167353361124 1.1120031608528236 1.0 18.11079834597609 -7.168904635483137 3.7304154549999997 1.0795274013424825 1.5261646487669736 0.2609819116753641 0.3298274036656255 0.3611344087516303 9.273422841961326 0.184193928087509 0.09863406304881861 6.777903238017741e-08 7.168904635483137 0.44663724742449107 LFDTPHT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 LFDTPHTPK 9 0 P30291 P30291 WEE1 Wee1-like protein kinase 1 LFDTPHT(1)PK;LFDTPHT(1)PK;LFDTPHT(1)PK;LFDTPHT(1)PK;LFDTPHT(1)PK;LFDTPHT(1)PK 201.46 2.3547e-06 4411090000.0 8245010.0 8586050.0 8244320.0 9855310.0 7800580.0 8255810.0 7229520.0 7206700.0 9417740.0 7404460.0 True False 7787642.85928006 8173563.270076198 8775762.058578385 10791955.699293008 8414441.266771106 8204282.42745278 7960350.434915844 7181701.639756421 7707715.81790556 7338862.24498271 1.0611512519674509 1.113737115813032 1.195793266807539 1.470521633877382 1.1465593692705878 1.1179229359512401 1.0846845422610325 0.9785851539407577 1.050260321097459 1.0 22.8071249865137 -6.652562942450773 1.7602137816023156 1.0149682998237501 1.2060429092234561 0.3809953477362851 0.1035711872038575 0.41319725818049713 2.615821380074112 0.057025339347103354 0.038692247837466304 2.2255484719018163e-07 6.652562942450773 0.191074609399706 LFDVCGS(ph)QDFESDLDR ddPTM_KYSE-520_SHP099_60min_R1 7 LFDVCGSQDFESDLDR 16 0 A0A494C1B7;A0A1W2PQ90;Q92878-3;Q92878;Q92878-2;E7EN38 A0A494C1B7 RAD50 DNA repair protein RAD50 1 LFDVCGS(0.943)QDFES(0.057)DLDR;LFDVCGS(1)QDFESDLDR;LFDVCGS(0.994)QDFES(0.006)DLDR;LFDVCGS(1)QDFESDLDR;LFDVCGS(1)QDFESDLDR;LFDVCGS(1)QDFESDLDR;LFDVCGS(1)QDFESDLDR 211.29 8.863600000000001e-18 1899240000.0 769570.0 710731.0 559528.0 634785.0 690529.0 696428.0 691883.0 722699.0 802838.0 707229.0 True False 726880.4180002385 676586.4159310193 595596.0701564531 695114.7755449306 744869.7037274378 692081.3345251507 761825.2857673647 720192.1258482146 657062.857099013 700963.5012758367 1.0369732756088297 0.9652234598514071 0.8496820006639398 0.991656162239174 1.0626369309838337 0.9873286316127453 1.086825896613379 1.027431705841145 0.9373709984943306 1.0 19.418979800414192 -5.515389500454871 24.66484484572358 1.0209391795914424 0.9468498186220493 0.21007198167890673 0.057074588877642184 408.32477531157576 1344765.8044631993 0.01684744085235459 0.022716891374428966 3.0521825112077356e-06 5.515389500454871 -0.07408936096939311 LFECDRDQMYYNLLK ddPTM_KYSE-520_SHP099_60min_R1 1 LFECDRDQMYYNLLK 15 1 P42704 P42704 LRPPRC Leucine-rich PPR motif-containing protein, mitochondrial 0 121.24 0.00012886 261570000.0 139720.0 127720.0 91596.0 106220.0 141250.0 145230.0 123460.0 132790.0 155900.0 143670.0 False True 131969.4530750853 121584.13948837151 97500.42471878167 116315.11686379262 152365.571397437 144323.56569966697 135940.54165348585 132329.38248341897 127592.48991918204 142397.19557356864 0.9267700290270401 0.8538380197632179 0.684707478444747 0.8168357276650096 1.0700040178720953 1.0135281465224018 0.9546574362361864 0.9292976729661211 0.896032322864548 1.0 17.119561208016783 -5.735228303496119 23.78840165833721 0.9744020647064126 0.8132140161486534 0.5351855377878835 0.07138924348346547 108.52033892439249 98488.84901343811 0.022718575751689195 0.029317010266635725 1.8398045836018529e-06 5.735228303496119 -0.16118804855775914 LFEDDDS(ph)NEKLFDEEEDS(ph)S(ph)EKLFDDSDER ddPTM_KYSE-520_SHP099_60min_R1 1 LFEDDDSNEKLFDEEEDSSEKLFDDSDER 29 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 3 LFEDDDS(1)NEKLFDEEEDS(1)S(1)EKLFDDSDER 175.28 6.3169e-10 467490000.0 614240.0 587480.0 480290.0 503800.0 554290.0 556990.0 536670.0 556920.0 718480.0 551900.0 True False 580166.8827429168 559256.5789745429 511250.26189117134 551681.0005270066 597909.4695213112 553513.6188050507 590921.8409944624 554988.1745061048 588022.1434068887 547010.595371703 1.0606136108729 1.022387104941758 0.9346258851599905 1.0085380524524026 1.0930491558669382 1.011888295196419 1.0802749453014175 1.0145839572430602 1.0749739554995597 1.0 19.061209252138685 -5.5527139018429725 24.772194358131678 1.0469384467490317 1.001535880992287 0.17714334144264643 0.04111441660863617 283.3044771103396 235226.63894461223 0.011946199622085228 0.015422668258370104 2.800825799020097e-06 5.5527139018429725 -0.04540256575674473 LFEDDDS(ph)NEKLFDEEEDS(ph)SEK ddPTM_KYSE-520_SHP099_60min_R1 1 LFEDDDSNEKLFDEEEDSSEK 21 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 2 LFEDDDS(1)NEKLFDEEEDS(0.859)S(0.141)EK 195.27 1.6380999999999999e-13 123900000.0 250410.0 236610.0 197110.0 232840.0 253610.0 248680.0 264490.0 280470.0 257320.0 234260.0 True False 236519.25812004053 225242.90044114954 209816.02598715096 254969.0435941012 273567.66415648843 247127.89587683784 291227.2303736475 279497.11503218993 210597.1745093258 232184.638651522 1.0186688468870855 0.9701025087159574 0.9036602387036322 1.0981305441863256 1.1782332618786069 1.0643593706806058 1.2542915503154388 1.2037709154897092 0.9070245806631674 1.0 17.824913001014256 -5.3610991675512 6.135140802149266 1.1187455409534044 0.9653828358609668 0.27570412633970465 0.09892198480428062 0.27089100784697034 13.898265111063466 0.027842561491149956 0.04158040638045233 4.354124395059471e-06 5.3610991675512 -0.15336270509243755 LFEDDDS(ph)NEKLFDEEEDS(ph)SEKLFDDSDER ddPTM_KYSE-520_SHP099_60min_R1 2 LFEDDDSNEKLFDEEEDSSEKLFDDSDER 29 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 2 LFEDDDS(1)NEKLFDEEEDS(0.534)S(0.466)EKLFDDSDER;LFEDDDS(0.991)NEKLFDEEEDS(0.962)S(0.046)EKLFDDS(0.001)DER 93.374 0.0021614 245500000.0 152316.0 118797.0 94374.0 131101.0 125660.0 119271.0 121850.0 130063.0 149133.0 123687.0 True False 143866.72784558174 113089.8138020675 100457.4990437388 143560.799623047 135548.72709240293 118526.58544766897 134167.78714140033 129611.84180993255 122054.20653699398 122591.22940703 1.1735482916800875 0.9224951438131377 0.8194509470999568 1.1710527769192476 1.1056967757648566 0.9668439253034529 1.0944321856495427 1.0572684721155097 0.9956194021983988 1.0 16.90349624185374 -5.2753105020687885 24.973496246408907 1.0582075720578636 0.9668978093426985 0.1300843592844012 0.099182507796609 1487.3955662175383 2677895.2661723974 0.02823594044085956 0.042127807261852966 5.305050201027066e-06 5.2753105020687885 -0.09130976271516511 LFEDDDS(ph)NEKLFDEEEDSSEK ddPTM_KYSE-520_SHP099_60min_R1 3 LFEDDDSNEKLFDEEEDSSEK 21 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFEDDDS(1)NEKLFDEEEDSSEK;LFEDDDS(1)NEKLFDEEEDSSEK;LFEDDDS(1)NEKLFDEEEDSSEK 240.41 1.1479000000000001e-26 709220000.0 1041270.0 837250.0 819080.0 953260.0 1022840.0 985240.0 1003920.0 1102780.0 1136740.0 1007060.0 True False 983508.6773797164 797027.2532621282 871879.2073743368 1043857.5437919296 1103331.688836492 979090.7517037782 1105406.0309150133 1098954.713570786 930336.6708834573 998138.2318808255 0.9853431578574622 0.7985139009857011 0.873505472014057 1.0458045894354269 1.1053896680797877 0.9809169916864566 1.1074678793057144 1.101004528701389 0.9320719727671313 1.0 19.92888010226294 -5.262323751865528 23.84086050048742 1.0463644222933586 0.8770601363759188 0.505423165140005 0.06899754822788043 29.482715598672407 794815.0906851041 0.01850352521089706 0.029351291829725543 5.466083329282266e-06 5.262323751865528 -0.16930428591743973 LFEDDEHEKEQYCIR ddPTM_KYSE-520_SHP099_60min_R1 2 LFEDDEHEKEQYCIR 15 1 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 0 ; 204.82 7.7001e-12 851610000.0 1824240.0 1717500.0 1195800.0 1016680.0 1771570.0 1622220.0 1294060.0 1363500.0 1384400.0 1402190.0 False True 1723045.7706677185 1634988.7219799426 1272883.1813476498 1113304.9615240113 1910982.4801455382 1612095.1232480435 1424876.213608538 1358770.3367432929 1133027.8578839996 1389767.6874873138 1.2398084846705337 1.176447500327185 0.9158963708884397 0.8010727055662488 1.375037351458772 1.1599745322635149 1.025262154558148 0.9776960199729037 0.8152642114830737 1.0 20.406412312617814 -7.226340158960617 2.536861552440549 0.9109950195213068 1.101690996032391 0.20683930713317433 0.1575953994803646 0.5255052418997648 6.559732391236943 0.1061676543534109 0.048276007981969786 5.938268645257557e-08 7.226340158960617 0.19069597651108428 LFEELGK ddPTM_KYSE-520_SHP099_60min_R1 3 LFEELGK 7 0 P34932 P34932 HSPA4 Heat shock 70 kDa protein 4 0 ;; 132.29 0.011457 358620000.0 966760.0 1235120.0 758420.0 640177.0 1060780.0 1195970.0 853030.0 971840.0 1059470.0 1029040.0 False True 913131.8956117189 1175782.9812470835 807308.9667149048 701019.2296037661 1144257.350987421 1188505.507607453 939262.5971705255 968468.9138691605 867096.95506527 1019923.506181006 0.8952944903003983 1.1528148671165317 0.791538739741166 0.6873252997459166 1.1219050684222094 1.1652888676501674 0.9209147465259364 0.9495505378589502 0.8501588107445639 1.0 19.96002952407821 -3.9670960383194087 16.59874845600569 0.9589153392585421 0.6715662601845119 0.016505141762978015 0.14952473509499448 20926053.027246993 286238120.521415 0.03930108180364018 174088631.74998686 0.00010787081542120579 3.9670960383194087 -0.2873490790740302 LFEES(ph)DDKEDEDADGK ddPTM_KYSE-520_SHP099_60min_R1 2 LFEESDDKEDEDADGK 16 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFEES(1)DDKEDEDADGK;LFEES(1)DDKEDEDADGK 83.87700000000001 0.005488 1198770000.0 3284200.0 2469800.0 2135000.0 2741400.0 2717200.0 2774100.0 2841200.0 3139300.0 2777000.0 2814400.0 True False 3102018.879109616 2351147.1007546196 2272625.5161207826 3001941.8317680326 2931028.1812468315 2756785.8128998554 3128416.2234398522 3128410.5010181307 2272766.8024731744 2789466.6055700644 1.1120473257917627 0.8428661938665265 0.8147168751125241 1.0761705574010791 1.0507486181745622 0.9882842144068148 1.121510548716721 1.1215084972773133 0.8147675250654971 1.0 21.411557849418948 -5.280245021756131 24.62875531388369 1.033375908384289 0.9151757204550558 0.14565961494061963 0.11076289467527292 1076.5910381422777 1409952.1333021722 0.030943763272120443 0.045991309086043285 5.245114560780484e-06 5.280245021756131 -0.11820018792923326 LFEES(ph)DDKEDEDADGKEVEDADEK ddPTM_KYSE-520_SHP099_60min_R1 11 LFEESDDKEDEDADGKEVEDADEK 24 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK;LFEES(1)DDKEDEDADGKEVEDADEK 273.96 4.8058e-38 19678690000.0 17528710.0 13707243.0 12098940.0 14176520.0 14900560.0 15163780.0 15859850.0 16813670.0 15890990.0 14902080.0 True False 16556357.513682919 13048726.471288787 12878857.031388452 15523852.19847384 16073149.299410904 15069137.224301402 17463118.415219825 16755347.30311006 13005586.795258626 14770059.16484279 1.120940500569697 0.8834579689666175 0.8719570373857425 1.0510352074570768 1.0882251127111164 1.0202489411938516 1.1823323265208938 1.1344130118986155 0.8805372172249559 1.0 23.81617226937005 -5.402588583791419 7.84679073785789 1.06329475794822 0.9515729277749895 0.14507919388447132 0.09939096262928666 0.4472001864418115 26.982637754505415 0.028051503842814664 0.041657048362544406 3.957413365627149e-06 5.402588583791419 -0.11172183017323045 LFEES(ph)DDKEDEDADGKEVEDADEKLFEDDDS(ph)NEK ddPTM_KYSE-520_SHP099_60min_R1 1 LFEESDDKEDEDADGKEVEDADEKLFEDDDSNEK 34 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 2 LFEES(1)DDKEDEDADGKEVEDADEKLFEDDDS(1)NEK 106.52 0.00055901 149200000.0 68198.0 63026.0 51359.0 50438.0 50929.0 52065.0 68231.0 72355.0 68883.0 51332.0 True False 64414.920990657454 59998.136356045274 54669.683317305484 55231.61235526233 54936.82255362875 51740.04302246888 75128.45535038876 72104.01739278394 56375.583599121266 50877.23841569168 1.2660852474805402 1.1792726614961182 1.0745410918459781 1.0855858941083498 1.079791754905569 1.016958558161661 1.4766614244380343 1.4172156280114732 1.1080708260638175 1.0 15.634732743722966 -6.740011533363472 24.99999108689573 1.2852551017193055 1.1148135179076957 0.15458715442989313 0.14392053474686056 344.54218317210285 401979.21963494504 0.054831753147767906 0.04243225216197361 1.8196525342733545e-07 6.740011533363472 -0.1704415838116098 LFEES(ph)DDKEDEDADGKEVEDADEKLFEDDDSNEK ddPTM_KYSE-520_SHP099_60min_R1 1 LFEESDDKEDEDADGKEVEDADEKLFEDDDSNEK 34 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 LFEES(1)DDKEDEDADGKEVEDADEKLFEDDDSNEK 163.08 6.124700000000001e-10 163460000.0 196210.0 172040.0 143610.0 171040.0 165480.0 173990.0 180580.0 172230.0 209870.0 188160.0 True False 185325.84016506208 163774.94016269542 152867.33038412442 187295.59017494868 178502.33454759538 172904.06387168643 198834.78869096478 171632.57432878413 171762.8983921661 186493.0487862649 0.9937412754587945 0.8781825447574395 0.8196945214795749 1.0043033313783376 0.9571527502463243 0.9271340942570333 1.0661780156688008 0.9203162018413245 0.9210150164310914 1.0 17.50876233189599 -5.282889868413149 24.906459113669097 0.9691283029873798 0.8953037366313596 0.25098119351989323 0.0582351029679456 1050.3515201026842 1219575.0977291774 0.016562802857750407 0.024590654846506382 5.213268962503138e-06 5.282889868413149 -0.0738245663560202 LFEHYYQELK ddPTM_KYSE-520_SHP099_60min_R1 2 LFEHYYQELK 10 0 Q08J23-2;Q08J23;A0A140T9Y7 Q08J23-2 NSUN2 tRNA (cytosine(34)-C(5))-methyltransferase 0 ; 156.48 0.00017124 925750000.0 2160400.0 1976730.0 1376300.0 1232010.0 2283600.0 2105600.0 1585180.0 1480450.0 1555090.0 1547220.0 False True 2040558.3053493702 1881764.9236677813 1465018.5001578596 1349099.8599826866 2463306.3280933583 2092458.1693673357 1745425.4642659381 1475314.664489629 1272724.8566287397 1533512.8345189432 1.330643121737866 1.2270943426815748 0.9553350106896432 0.8797447465810704 1.6063160820340232 1.3644868971857882 1.1381877118840489 0.9620491144780208 0.829940792134282 1.0 20.54840881041189 -7.226786673703446 3.332871246379729 0.913018010305027 1.217780429905499 0.3122501752574022 0.196230165094672 0.33990649292696423 7.761635166207447 0.12131805757549126 0.059901890909283224 5.932166421979026e-08 7.226786673703446 0.304762419600472 LFENLR ddPTM_KYSE-520_SHP099_60min_R1 2 LFENLR 6 0 Q92769-3;Q92769;Q13547;Q96G03 Q92769-3;Q13547;Q96G03 HDAC2;HDAC1;PGM2 Histone deacetylase 2;Histone deacetylase 1;Phosphoglucomutase-2 0 ; 135.5 0.052564 587450000.0 597490.0 614320.0 431490.0 386250.0 625030.0 599920.0 491130.0 505630.0 508040.0 534950.0 False True 564346.0386332147 584807.1450868807 459304.5358084101 422959.08386970335 674216.30506577 596175.6767509748 540778.2133668929 503876.0875449288 415792.7426461914 530210.7591848028 1.0643805861293625 1.102971101503145 0.8662678526452183 0.7977187873742915 1.271600572765395 1.1244126348314638 1.019930667190416 0.9503316913440923 0.7842027636056864 1.0 19.016206420509707 -7.40437511803683 3.5988434978135784 0.8862546767182283 1.0347229494112882 0.1588749066776899 0.1335972991705119 0.46900967008788697 10.860789415050876 0.09081413043739436 0.038367662276736755 3.941167401518016e-08 7.40437511803683 0.14846827269305984 LFFDKR ddPTM_KYSE-520_SHP099_60min_R1 2 LFFDKR 6 1 O15371-2;O15371;O15371-3;B0QYA4 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 0 ; 119.7 0.02005 1845480000.0 2904800.0 2548100.0 1739300.0 1361580.0 2624300.0 2422100.0 1677560.0 1693030.0 1937840.0 1974030.0 False True 2743664.953424763 2425685.4512239248 1851418.0609783942 1490984.1538260474 2830817.479775531 2406982.775467625 1847144.136207855 1687157.2740861722 1585977.104971054 1956541.6299720993 1.4023033864420702 1.23978218202212 0.9462707220826146 0.7620508201746309 1.44684755816614 1.230223133816963 0.9440862938521761 0.862316062301333 0.8106022793870582 1.0 20.89987437658069 -6.881417011283489 5.07262275161421 0.8824871425609497 1.157318394602755 0.3123531582055761 0.1941113926702115 0.2927253690756999 11.752329977647793 0.09002936855954602 0.060001655472789885 1.313962554212683e-07 6.881417011283489 0.27483125204180525 LFIGGLNRET(ph)NEK ddPTM_KYSE-520_SHP099_60min_R1 1 LFIGGLNRETNEK 13 1 F2Z2U1;J3KQ82;J3KPK3;Q15415-2;P0DJD3-2;P0C7P1-2;Q15415;P0DJD4;P0DJD3;P0C7P1;A6NEQ0;A6NDE4 F2Z2U1 RBMY1A1;RBMY1J;RBMY1E;RBMY1F;RBMY1D;RBMY1C;RBMY1B RNA-binding motif protein, Y chromosome, family 1 member F/J;RNA-binding motif protein, Y chromosome, family 1 member A1;RNA-binding motif protein, Y chromosome, family 1 member D;RNA-binding motif protein, Y chromosome, family 1 member C;RNA-binding motif protein, Y chromosome, family 1 member E;RNA-binding motif protein, Y chromosome, family 1 member B 1 LFIGGLNRET(1)NEK 71.223 0.057814 0.0 13596.0 20822.0 20826.0 14263.0 19587.0 19688.0 16025.0 17009.0 28637.0 20288.0 True False 12841.802777045938 19821.679865540824 22168.477282778153 15618.551231672685 21128.385465214844 19565.11988910722 17644.963388928496 16949.999748930444 23437.242680023184 20108.26410382516 0.6386330869109216 0.9857479374249009 1.1024560433618475 0.776723000604592 1.050731448330024 0.9729890053207219 0.8774980922183097 0.842936996521051 1.165552757762156 1.0 14.295500922311671 -4.2594005836252755 24.210660555686133 0.9671012703096766 0.6386329078661614 0.4458303605509064 0.11218377390384647 109.91250540506005 1305056.824929962 0.026898928844635774 0.1706788297430122 5.502998778041977e-05 4.2594005836252755 -0.3284683624435152 LFIGGLS(ph)FETTDDSLR ddPTM_KYSE-520_SHP099_60min_R1 2 LFIGGLSFETTDDSLR 16 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 LFIGGLS(0.995)FET(0.003)T(0.003)DDSLR;LFIGGLS(1)FETTDDSLR 173.36 2.8817e-08 97746000.0 49119.0 66665.0 49494.0 42939.0 47147.0 44717.0 37963.0 50898.0 53449.0 41378.0 True False 46394.27115370107 63462.31333379502 52684.46243319997 47019.909649918925 50857.20067026516 44437.904616071064 41800.670523175846 50721.44671768248 43744.008939643056 41011.42311159689 1.1312524080780328 1.5474301674708197 1.2846289749526463 1.1465076332994406 1.240074028445118 1.083549441704335 1.0192445750890264 1.2367638786799346 1.0666298709169513 1.0 15.323738186136332 -5.490480082002002 1.3700004961828824 1.1012935661597865 1.348844565045429 0.39513650696129465 0.1196001019391438 0.42864968785647645 1.6241049379440848 0.04155519560243542 0.0771236442246539 3.2323614454187866e-06 5.490480082002002 0.24755099888564258 LFIGGLS(ph)FETTEESLR ddPTM_KYSE-520_SHP099_60min_R1 3 LFIGGLSFETTEESLR 16 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 LFIGGLS(0.979)FET(0.01)T(0.01)EES(0.001)LR;LFIGGLS(0.995)FET(0.005)T(0.001)EESLR;LFIGGLS(0.993)FET(0.004)T(0.004)EESLR 127.75 7.775100000000001e-05 93921000.0 78034.0 113880.0 84616.0 71277.0 78361.0 89701.0 76887.0 93113.0 104539.0 78817.0 True False 73705.29846307763 108409.03386263497 90070.4827503869 78051.1446497885 84527.56488689953 89141.14278610356 84659.48830480783 92790.01273573756 85557.35281373542 78118.7426986981 0.9435033887751753 1.387746782878543 1.1529945265220964 0.9991346756671402 1.0820394948357028 1.141098022147112 1.083728249843155 1.1878072986098376 1.0952218361184822 1.0 16.253381109151135 -13.888653384484497 0.30746220086756787 5.630276608079959e-16 1.1310637812281823 0.0873710035754327 0.1129311700621121 680.9862815306959 6.653171653503379 439.55282362413186 0.10849853119464019 1.2922502221989492e-14 13.888653384484497 1.1310637812281816 LFIGGLSFETTDDSLR ddPTM_KYSE-520_SHP099_60min_R1 2 LFIGGLSFETTDDSLR 16 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 195.77 1.9223e-11 160980000.0 61034.0 84760.0 79055.0 68992.0 78964.0 71781.0 57250.0 68328.0 88442.0 58802.0 False True 57648.322351737435 80688.00237264618 84151.01179247227 75548.97893679875 85178.01755629877 71332.98815318997 63037.388706156424 68090.98611587512 72383.16224138734 58281.06002726372 0.9891433396161585 1.3844635347212382 1.443882656786041 1.2962869738720804 1.4615042608431064 1.2239480222188923 1.0816101950902697 1.1683209962897438 1.2419671537807773 1.0 15.83073949720872 -6.516302027852428 12.693590851467638 1.1392280881437569 1.3268037206965628 0.3034868739333705 0.13573069040501415 0.6787205575823754 1302.8723886123203 0.04976466586528759 0.04065077060773621 3.04577608368951e-07 6.516302027852428 0.18757563255280596 LFIGGLSFETTEESLR ddPTM_KYSE-520_SHP099_60min_R1 6 LFIGGLSFETTEESLR 16 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;;; 310.85 1.1072e-36 222815000.0 132193.3 151444.0 167707.0 149126.0 174564.4 147926.5 140264.0 149582.0 194084.0 136103.7 False True 124860.27412818979 144168.4029179217 178517.6615606874 163298.8902036334 188301.62514442997 147003.2358429508 154443.2539647219 149063.1349547013 158843.23805949008 134897.9271050764 0.925590754489 1.0687221517171588 1.3233536303462556 1.2105366902816421 1.3958822732520988 1.0897368032085857 1.1448897494504937 1.1050068607695591 1.1775068858972302 1.0 17.041508653870483 LFIHNHEQHHK ddPTM_KYSE-520_SHP099_60min_R1 2 LFIHNHEQHHK 11 0 Q02809;Q02809-2 Q02809 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 0 ; 60.398 0.028161000000000002 791430000.0 647730.0 561830.0 619550.0 681250.0 570630.0 472140.0 589580.0 563740.0 676320.0 281660.0 False True 611799.1256822577 534838.8434759777 659487.1843150485 745995.7951747185 615535.3345594298 469193.1991285593 649180.5001463002 561784.5175179058 553517.3366397765 279164.7115281642 2.1915346045466597 1.9158540509946191 2.3623586975050554 2.6722424589092695 2.20491813306185 1.6807038273575763 2.325438973259362 2.012376544451711 1.9827625548006755 1.0 18.090757060250446 -9.655184182966746 0.40126575468122017 0.6431180187675077 2.240650589897776 0.6732823556254133 0.2468562721524161 6.419439795650799 0.9022463926377668 3.184743737756002 0.17707358773653603 2.2121563418747502e-10 9.655184182966746 1.5975325711302681 LFIS(ph)PANEK ddPTM_KYSE-520_SHP099_60min_R1 2 LFISPANEK 9 0 A0A087WYA9;A0A0B4J1R8;Q6PII3 A0A087WYA9 CCDC174 Coiled-coil domain-containing protein 174 1 LFIS(1)PANEK;LFIS(1)PANEK 117.09 0.00081915 354650000.0 810330.0 878300.0 716340.0 560830.0 654450.0 711970.0 582970.0 746150.0 804450.0 723920.0 True False 765379.3795471932 836105.1496448233 762516.4225845246 614131.1145803118 705951.4916888674 707526.3311381375 641902.2968389179 743561.77980272 658382.1585342262 717506.6320012372 1.0667209826513122 1.165292573411895 1.0627308356129728 0.8559239555283341 0.9838954236839028 0.9860903015833273 0.8946290782686606 1.036313459192441 0.9175973143243238 1.0 19.45263264129284 -5.037720728343955 8.150935320479922 0.955311017587088 1.1157288295035652 0.6032387031691288 0.05492561455160117 0.171115051054796 34.41717439630697 0.0140090947303866 0.024876402494098122 9.168098522057624e-06 5.037720728343955 0.1604178119164772 LFLDHDK ddPTM_KYSE-520_SHP099_60min_R1 1 LFLDHDK 7 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 0 128.57 0.0036061 338740000.0 314230.0 291990.0 209510.0 167930.0 315620.0 285470.0 198650.0 254130.0 269410.0 276010.0 False True 296799.03549802495 277962.3621140745 223015.34982785254 183890.01671000457 340457.49836785183 283688.27584028005 218731.48063717017 253248.48234438794 220491.9352734241 273564.7661325307 1.0849315125407568 1.016075154866301 0.8152195656651592 0.6721991991502207 1.2445224696915627 1.0370058975461955 0.7995601324302264 0.9257350130451362 0.8059953713725143 1.0 18.061522904225047 -6.757407180599312 24.997595333585874 0.8766338846960893 0.9708126193176914 0.08303223878762356 0.15372375741204042 312.1636802013724 1935272.5118104687 0.06399163976222715 0.04771539318717071 1.748206857249577e-07 6.757407180599312 0.09417873462160209 LFLGPYKGRS(ph)TELIPR ddPTM_KYSE-520_SHP099_60min_R1 2 LFLGPYKGRSTELIPR 16 2 O60502;O60502-3;O60502-2;O60502-4;H7C3X0 O60502 MGEA5 Protein O-GlcNAcase 1 LFLGPY(0.303)KGRS(0.349)T(0.349)ELIPR;LFLGPY(0.308)KGRS(0.346)T(0.346)ELIPR 57.159 0.037566 915510000.0 671320.0 509110.0 351460.0 642850.0 579150.0 448850.0 391750.0 488350.0 387960.0 224540.0 True False 634080.5413567589 484651.59141031 374115.67395588243 703946.2707200991 624725.8100872604 446048.56065754686 431351.9131115595 486656.0278317463 317516.24367572716 222550.7502894766 2.849150319789965 2.1777126825225848 1.6810353300056822 3.1630819927789995 2.8071161713661534 2.004255479154134 1.9382181931559015 2.186719331203073 1.426713876555019 1.0 17.76377483901977 -7.765758831155784 0.7617339411812105 0.9911132975619645 2.465902984589389 0.5632445347660208 0.4218044569991767 0.5076316473622813 0.6554649352635563 0.4282009212056766 0.17084552151016927 1.714909352517718e-08 7.765758831155784 1.4747896870274244 LFLINEQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 LFLINEQSPR 10 0 E9PFF8;Q6NW34-2;Q6NW34 E9PFF8 C3orf17 Uncharacterized protein C3orf17 1 LFLINEQS(1)PR;LFLINEQS(1)PR;LFLINEQS(1)PR;LFLINEQS(1)PR;LFLINEQS(1)PR;LFLINEQS(1)PR 167.83 5.313e-05 783389000.0 867818.0 863473.0 823059.0 726516.0 738236.0 732366.0 690770.0 749700.0 890468.0 754474.0 True False 819678.405587707 821990.4609806028 876114.7000809613 795563.862204999 796330.9732117391 727795.0321366251 760599.7728655316 747099.465681296 728781.4580715459 747789.9473318907 1.0961345609316009 1.0992264123280326 1.1716053461362144 1.0638868107863249 1.064912648335328 0.973261321221812 1.0171302457051559 0.9990766368910703 0.9745804429062374 1.0 19.512273551367166 -5.886130751726937 1.7629734047428371 0.9940199206597597 1.1179876613889683 0.8039972580369668 0.027054544943474975 0.14662649734107952 0.9363456669349683 0.009791579957210958 0.011775457082329369 1.2997781988270503e-06 5.886130751726937 0.12396774072920858 LFLLPHK ddPTM_KYSE-520_SHP099_60min_R1 1 LFLLPHK 7 0 Q08945;E9PMD4 Q08945 SSRP1 FACT complex subunit SSRP1 0 88.59100000000001 0.013248 183160000.0 419910.0 346070.0 316980.0 289290.0 445060.0 430250.0 293700.0 296280.0 286910.0 288110.0 False True 396616.7552301681 329444.27773833944 337413.03798593185 316784.03462178976 480083.68995499617 427564.6501568657 323390.06223577517 295252.27383227175 234814.37641252397 285557.5695461881 1.3889204753369933 1.1536877774309982 1.1815937449045848 1.1093526083907606 1.6812150723861097 1.497297553121625 1.1324863940735697 1.0339500868476035 0.8223013551547385 1.0 18.123422102428044 -7.1446985798812115 2.7015031142848223 0.9336946519622552 1.323997890330048 0.5042638566775397 0.16973161497184508 0.2662419971908653 3.731842456695315 0.10671973015588128 0.05352264833518418 7.166406188269775e-08 7.1446985798812115 0.3903032383677928 LFNAIIHR ddPTM_KYSE-520_SHP099_60min_R1 3 LFNAIIHR 8 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;E9PKG0;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;; 107.66 0.0023961 329320000.0 302435.0 302940.0 207927.0 176248.0 307383.0 246318.0 194510.0 187525.0 177845.0 164923.0 False True 285658.32766077446 288386.3076777898 221330.3071149629 192998.55692910656 331572.2933299701 244780.63799497744 214172.96903466375 186874.5195436639 145552.83110761337 163461.91052815254 1.7475528503111213 1.7642416312522051 1.3540176203730585 1.1806943666908079 2.028437648004025 1.497478141568764 1.3102316517815165 1.143229752667543 0.8904388223368114 1.0 17.31859497625207 -7.125523334031495 1.6876644553387319 0.9639408272381877 1.5947833477387614 0.5888136239714679 0.2222287485613458 0.2995386643530764 1.6086847042771801 0.1650367935034748 0.07275581077571339 7.489911151908096e-08 7.125523334031495 0.6308425205005737 LFNDIHK ddPTM_KYSE-520_SHP099_60min_R1 2 LFNDIHK 7 0 O00622 O00622 CYR61 Protein CYR61 0 ; 98.523 0.0093998 1110060000.0 2149400.0 2143400.0 1607840.0 1533440.0 2515300.0 2015520.0 1916780.0 2011330.0 2082500.0 1980310.0 False True 2030168.4972773292 2040427.8466910068 1711483.939034959 1679177.676554452 2713239.799900692 2002940.392060816 2110546.8283700706 2004353.1656779498 1704370.4955528956 1962765.9940578665 1.034340570105412 1.0395675556170507 0.8719755407503259 0.8555159818531818 1.3823552110209933 1.0204682565953225 1.0752921309822974 1.0211880436822247 0.8683513473907513 1.0 20.904456750617218 -2.650744452402506 2.5106284283336713 1.0203135569999544 41.12901830441214 0.00043072628247098343 0.14391915163497296 60813.96279329385 140.51516412368838 0.03714137494225582 14079377.77771139 0.0022348868883455167 2.650744452402506 40.10870474741219 LFNYHK ddPTM_KYSE-520_SHP099_60min_R1 2 LFNYHK 6 0 P04181 P04181 OAT Ornithine aminotransferase, mitochondrial;Ornithine aminotransferase, hepatic form;Ornithine aminotransferase, renal form 0 ; 99.51100000000001 0.020923 1378890000.0 2667700.0 2618000.0 1770870.0 1620610.0 2776200.0 2857400.0 1964390.0 1917470.0 1978380.0 1881900.0 False True 2519717.363071896 2492227.3503018823 1885023.1136921807 1774632.2871458344 2994671.1455827532 2839565.9067012873 2162969.711798891 1910818.7441108632 1619156.062901291 1865227.8300960427 1.3508898604317698 1.3361517076300296 1.0106127966121536 0.9514292348160259 1.6055256614032798 1.5223694719132916 1.1596276213011025 1.0244425443794032 0.8680741498575639 1.0 20.830920429978878 -7.21322973475618 3.0341318647614934 0.94683410279226 1.2853406322593903 0.37145346272609603 0.19208875964086755 0.3257743852618496 5.9503602197189265 0.1231331872009611 0.06004144223317497 6.120265539323951e-08 7.21322973475618 0.33850652946713033 LFPADT(ph)SPSTATK ddPTM_KYSE-520_SHP099_60min_R1 7 LFPADTSPSTATK 13 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 LFPADT(0.499)S(0.499)PS(0.002)T(0.001)ATK;LFPADT(0.449)S(0.449)PS(0.091)T(0.009)AT(0.001)K;LFPADT(0.475)S(0.475)PS(0.043)T(0.006)ATK;LFPADT(0.701)S(0.292)PS(0.006)T(0.001)ATK;LFPADT(0.66)S(0.335)PS(0.005)T(0.001)ATK;LFPADT(0.764)S(0.232)PS(0.004)TATK;LFPADT(0.493)S(0.401)PS(0.099)T(0.007)ATK 198.33 6.2035e-08 16390380000.0 14187980.0 14859820.0 11853720.0 9604810.0 10155800.0 13539200.0 10616660.0 13636970.0 15692950.0 13830130.0 True False 13400944.466363057 14145931.942155447 12617829.757822579 10517648.254608572 10955003.681402408 13454696.83068875 11689895.601416636 13589666.53396272 12843505.867076509 13707605.80787832 0.9776283804908505 1.0319768557996616 0.9204984396743155 0.7672855786795132 0.7991916192327416 0.9815497337219742 0.8528036015376206 0.9913960705050465 0.9369620083249566 1.0 23.708473273933222 -9.090873393229773 11.091919611626263 1.0000004741345947 0.9153699636191406 0.08226030912957649 0.08213797463252856 0.0 0.0 0.08651720907728916 0.02098350537995943 8.111975060055794e-10 9.090873393229773 -0.08463051051545412 LFPADTS(ph)PSTATK ddPTM_KYSE-520_SHP099_60min_R1 5 LFPADTSPSTATK 13 0 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 LFPADT(0.003)S(0.997)PSTATK;LFPADT(0.05)S(0.948)PS(0.001)TATK;LFPADT(0.01)S(0.988)PS(0.002)TATK;LFPADT(0.004)S(0.973)PS(0.023)TATK;LFPADT(0.195)S(0.783)PS(0.02)T(0.001)ATK 293.75 2.6585e-30 10528050000.0 13250300.0 14107300.0 10596860.0 8557920.0 9350630.0 12619070.0 9660530.0 12337870.0 13730900.0 12092390.0 True False 12515279.445181808 13429564.132510986 11279950.551175477 9371262.143767534 10086471.383193038 12540309.703323672 10637110.650087092 12295072.808650512 11237714.687821021 11985260.83233706 1.0442225346831604 1.1205066222903632 0.9411518621890476 0.7818988902171593 0.8415729556739427 1.0463109546593305 0.8875159914240194 1.0258494145974328 0.9376278785273403 1.0 23.514757970563995 -4.802936014979966 8.012913175641316 0.9271251345443032 1.0821816560610096 0.36311931224912464 0.07901286003054868 0.2230290979326368 37.69579141936527 0.021714412033184142 0.04614233974650807 1.5742147779457263e-05 4.802936014979966 0.15505652151670635 LFPDT(ph)PLALDANK ddPTM_KYSE-520_SHP099_60min_R1 8 LFPDTPLALDANK 13 0 Q12906;Q12906-5;Q12906-2;Q12906-3;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 LFPDT(1)PLALDANK;LFPDT(1)PLALDANK;LFPDT(1)PLALDANK;LFPDT(1)PLALDANK;LFPDT(1)PLALDANK;LFPDT(1)PLALDANK;LFPDT(1)PLALDANK;LFPDT(1)PLALDANK 217.19 1.2406e-10 18393840000.0 20891100.0 26651500.0 19422020.0 16266820.0 17285720.0 24186900.0 17281840.0 22933400.0 25570100.0 23053800.0 True False 19732229.037624635 25371121.935282923 20673994.48553076 17812813.68200223 18646007.821706917 24035940.585424997 19028857.041704874 22853849.388095804 20927214.40976572 22849561.267585006 0.8635714623377605 1.1103548833243932 0.9047873717759053 0.7795691774297637 0.8160335160639884 1.0519213171730795 0.8327887270509529 1.00018766752064 0.9158694193158808 1.0 24.445663128700307 -7.308712970157208 24.998298462976337 0.9685213941693022 0.9130669725199682 0.07726401994863696 0.099583662027557 1442.1332080825725 762593.9206910057 0.05633152523660972 0.027060944974809258 4.9123242962847445e-08 7.308712970157208 -0.05545442164933401 LFPDT(ph)PLALDANKK ddPTM_KYSE-520_SHP099_60min_R1 4 LFPDTPLALDANKK 14 1 Q12906;Q12906-5;Q12906-2;Q12906-3;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 LFPDT(1)PLALDANKK;LFPDT(1)PLALDANKK;LFPDT(1)PLALDANKK;LFPDT(1)PLALDANKK 161.87 7.528900000000001e-08 22874470000.0 6442700.0 6277480.0 5125020.0 4169150.0 4611690.0 5684240.0 4572940.0 5082090.0 6537370.0 5425520.0 True False 6085310.5877959635 5975900.438110425 5455386.989521924 4565384.762499348 4974603.766073246 5648762.549698238 5035217.40279356 5064461.415958721 5350348.401686744 5377454.113790686 1.1316341263033658 1.111288039220084 1.014492522684922 0.8489862797324936 0.9250853025999207 1.0504529523016795 0.9363571117939534 0.9417953754306739 0.994959378261466 1.0 22.358491878402717 -4.858115984692983 3.5638241591276154 0.9547401879424131 1.1244247413895494 0.6186398352007725 0.050978975932044465 0.1458726978834668 3.5531918811305205 0.014157576377603459 0.03421898366972556 1.3863855248961233e-05 4.858115984692983 0.1696845534471363 LFPEFDDS(ph)DYDEVPEEGPGAPAR ddPTM_KYSE-520_SHP099_60min_R1 7 LFPEFDDSDYDEVPEEGPGAPAR 23 0 Q96P48-3;Q96P48 Q96P48-3 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 1 LFPEFDDS(0.882)DY(0.118)DEVPEEGPGAPAR;LFPEFDDS(0.684)DY(0.316)DEVPEEGPGAPAR;LFPEFDDS(0.955)DY(0.045)DEVPEEGPGAPAR;LFPEFDDS(0.904)DY(0.096)DEVPEEGPGAPAR;LFPEFDDS(0.895)DY(0.105)DEVPEEGPGAPAR;LFPEFDDS(0.929)DY(0.071)DEVPEEGPGAPAR;LFPEFDDS(0.5)DY(0.5)DEVPEEGPGAPAR 127.17 2.7611e-07 580637000.0 271420.0 281397.0 244673.0 226516.0 254336.0 205271.0 201496.0 264034.0 303724.0 222588.0 True False 256363.79153764434 267878.26573449204 260445.01307064152 248044.01253548122 274350.7962261135 203989.82754758856 221865.18209145337 263118.12767999864 248575.37785897133 220616.04349084344 1.1620360309302917 1.2142284010528464 1.1805352364659334 1.12432445351952 1.243566840765596 0.9246373215647622 1.005662047876685 1.1926518285644045 1.1267330060213339 1.0 17.751178183874988 -6.237465253428536 24.981912033344358 1.0592103764412888 1.1829533862548167 0.4489117672192774 0.07441908242616269 869.3283266465779 905872.3191899601 0.02624272814358441 0.026229784214355015 5.788082951757503e-07 6.237465253428536 0.12374300981352793 LFPEFDDSDY(ph)DEVPEEGPGAPAR ddPTM_KYSE-520_SHP099_60min_R1 1 LFPEFDDSDYDEVPEEGPGAPAR 23 0 Q96P48-3;Q96P48 Q96P48-3 ARAP1 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 1 LFPEFDDS(0.22)DY(0.78)DEVPEEGPGAPAR 52.451 0.056632 106230000.0 135550.0 104560.0 151910.0 108980.0 114670.0 113290.0 95468.0 128850.0 154160.0 112880.0 True False 128030.77128777425 99536.78065224022 161702.36166459374 119337.4264339681 123693.87661694913 112582.91508720814 105118.83711789253 128403.04942381606 126168.4300573514 111879.97101931123 1.1443582807656902 0.8896747089348058 1.4453200174379992 1.0666558575830312 1.1055944642280855 1.0062830197531565 0.9395679687810101 1.1476857587105813 1.1277123948805268 1.0 16.77159225965689 -5.485381338565073 24.999530666244194 1.0566506023603761 1.1533090821000198 0.10585868509768359 0.13785528382973325 1445.512506131827 963722.2980600373 0.038982387756203406 0.05780571492169739 3.2705339478925435e-06 5.485381338565073 0.0966584797396437 LFPGS(ph)PAIYK ddPTM_KYSE-520_SHP099_60min_R1 4 LFPGSPAIYK 10 0 P49792;Q7Z3J3;J3KNE0;A6NKT7;A0A1W2PNU4;A0A286YES2;F8VYC4;P0DJD0;P0DJD1;J3KQ37;Q7Z3J3-2;H0YBN8;C9J6W1;Q99666;O14715;F8W705;Q99666-2;C9J1W9;C9JF75 P49792;Q99666 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2;RGPD8;RGPD5;RGPD6 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 LFPGS(1)PAIYK;LFPGS(0.983)PAIY(0.017)K;LFPGS(1)PAIYK;LFPGS(1)PAIYK 141.71 0.00023064 1299668000.0 2865260.0 2746910.0 2246870.0 2038390.0 2203510.0 2308950.0 2017320.0 2522760.0 2785890.0 2251740.0 True False 2706318.3160457993 2614944.320404031 2391706.8353191074 2232117.9727356983 2376913.7007431216 2294538.9865884837 2221250.392745913 2514009.1343766125 2280042.60257184 2231791.335427211 1.2126215713297201 1.1716795736656431 1.0716534280572807 1.0001463565626867 1.065025059920367 1.028115375378165 0.9952769138790117 1.1264534880432175 1.0216199724314248 1.0 21.089770715928108 -4.751567063312033 2.771483569360178 1.038118361527596 1.2062099692006178 0.7410609101878967 0.03716656502834901 0.12955722348581705 1.9732070526231853 0.009868229228980747 0.030776673188885877 1.771874412964563e-05 4.751567063312033 0.1680916076730219 LFPS(ph)PGLPTR ddPTM_KYSE-520_SHP099_60min_R1 1 LFPSPGLPTR 10 0 A0A384DVU0;Q8IY17-5;Q8IY17-2;Q8IY17-3;Q8IY17;M0QYT1;M0R2C2 A0A384DVU0 PNPLA6 Neuropathy target esterase 1 LFPS(1)PGLPTR 115.29 0.00059964 152860000.0 61002.0 106320.0 66134.0 73536.0 82833.0 87178.0 73792.0 87282.0 101400.0 74905.0 True False 57618.09745552784 101212.22761042649 70397.10345814133 80524.83933059551 89351.48584470019 86633.88976496283 81251.61550051867 86979.23911377203 82988.316085985 74241.39997520813 0.7760912034898129 1.3632855474738472 0.9482189651818184 1.0846352487626263 1.2035264134908268 1.16692155312121 1.0944246138630402 1.1715732615874366 1.1178172301936358 1.0 16.179936295271492 -4.233080705110445 24.55444643057575 1.1287658861269814 0.7760905319672631 0.4890920937134495 0.10784317330799202 7351.919762013628 6365559.334436053 0.025198934979657264 2.5583508782681768 5.846814224750777e-05 4.233080705110445 -0.3526753541597183 LFQLGPPS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 4 LFQLGPPSPVK 11 0 Q9NZH5-2;Q9NZH5;O95997 Q9NZH5-2 PTTG2;PTTG1 Securin-2;Securin 1 LFQLGPPS(1)PVK;LFQLGPPS(1)PVK;LFQLGPPS(1)PVK;LFQLGPPS(1)PVK 142.85 8.518e-05 20410810000.0 2521400.0 2781500.0 2166640.0 1893120.0 2049970.0 3063800.0 2319070.0 2931040.0 3038340.0 2992400.0 True False 2381532.915713715 2647872.5648833807 2306305.081146572 2073041.5556127194 2211290.9762662197 3044677.687741098 2553504.227542119 2920872.906349878 2486654.046318454 2965889.66405197 0.8029742119469433 0.892775141630145 0.7776098717022804 0.6989611180547256 0.7455742548578747 1.0265647183858784 0.8609572562633858 0.9848218366826935 0.838417583923608 1.0 21.50003349749908 -6.249107695396602 24.878448370386916 0.9361289570762568 0.784612769241891 0.55246402523597 0.07125512983037413 597.8386011206852 1206104.8010790227 0.02403901632061654 0.023866307131276798 5.634979035201756e-07 6.249107695396602 -0.1515161878343657 LFRPPS(ph)PAPAAPGAR ddPTM_KYSE-520_SHP099_60min_R1 10 LFRPPSPAPAAPGAR 15 1 Q86U90 Q86U90 YRDC YrdC domain-containing protein, mitochondrial 1 LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR;LFRPPS(1)PAPAAPGAR 127.83 9.7106e-05 15589500000.0 3896370.0 4203110.0 3472030.0 2705230.0 2997660.0 3922860.0 3062100.0 3580590.0 4210840.0 3956060.0 True False 3680230.5888789697 4001186.286603267 3695842.6092444197 2962334.2458429406 3233558.787647717 3898375.9756289674 3371646.951216096 3568169.7690059883 3446257.6026381506 3921012.3861681093 0.9385919314770519 1.0204472448794044 0.9425735614307147 0.7555023943033098 0.8246744639355194 0.9942268964466945 0.8598919409461769 0.9100123686406041 0.878920356078262 1.0 21.90279476854544 -5.008117156724671 24.89424777423809 0.8829448801499644 0.9800173155321531 0.21120844997356014 0.07096022984961733 505.0226273978479 1548854.9760742846 0.01890489146074369 0.03668275065344955 9.814831391466356e-06 5.008117156724671 0.09707243538218868 LFS(ph)ADPFDLEAQAK ddPTM_KYSE-520_SHP099_60min_R1 6 LFSADPFDLEAQAK 14 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3;H0YII4;H0YI90 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 LFS(1)ADPFDLEAQAK;LFS(1)ADPFDLEAQAK;LFS(1)ADPFDLEAQAK;LFS(1)ADPFDLEAQAK;LFS(1)ADPFDLEAQAK;LFS(1)ADPFDLEAQAK 205.27 1.3280999999999999e-11 425739200.0 313291.0 352295.0 296853.0 314157.0 387657.0 991788.0 994124.0 1586349.0 1743580.0 1522340.0 True False 295912.12369987514 335370.2193944241 315988.6193615934 344014.38682525355 418163.40043338935 985597.8832069209 1094619.7556352664 1580846.3255756386 1426989.8240749652 1508853.2519625975 0.19611723228549627 0.2222682815298313 0.20942302967540433 0.22799724650345335 0.2771398741988164 0.6532099009131158 0.7254646893006137 1.0477137677367883 0.9457446058580244 1.0 20.525021068388995 -6.575600588777457 1.209619594363556 1.0057106286301476 0.19896829006339484 0.9746407696806267 0.05458770393544386 0.06172442330490546 0.18424254562018855 0.030760917808057765 0.020879457809343006 2.657048068165475e-07 6.575600588777457 -0.8067423385667527 down LFS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 2 LFSPSK 6 0 Q96RY5;H7C194 Q96RY5 CRAMP1L Protein cramped-like 1 LFS(0.556)PS(0.444)K;LFS(0.95)PS(0.05)K 97.09299999999999 0.013141 823840000.0 945130.0 872010.0 767400.0 745780.0 811190.0 809590.0 771330.0 858100.0 876000.0 915710.0 True False 892701.7548300547 830117.3306863041 816867.8318834126 816658.7069730673 875026.0379602603 804537.0485078376 849303.5638553655 855123.4513820462 716940.4821629459 907597.5218116007 0.9835876954006955 0.9146315527937505 0.9000331228901022 0.8998027069785118 0.9641124142931479 0.8864469428056059 0.9357711358225416 0.9421835459347507 0.7899321725029661 1.0 19.791693144184176 LFS(ph)PVIAR ddPTM_KYSE-520_SHP099_60min_R1 2 LFSPVIAR 8 0 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-5 DENND4C DENN domain-containing protein 4C 1 LFS(1)PVIAR;LFS(1)PVIAR 120.99 0.00096985 105990000.0 72604.0 51877.0 48708.0 58978.0 67805.0 85812.0 92538.0 119479.0 118455.0 96813.0 True False 68576.51138751427 49384.7510510355 51847.79561555552 64583.2513876177 73140.86774232355 85276.41547765477 101892.64412384815 119064.55523560828 96946.55800754773 95955.3121393742 0.7146713387572282 0.514664065490242 0.5403327284293242 0.6730555083163205 0.7622388600652679 0.8887096876282531 1.0618760113650616 1.240833389845766 1.0103302865268549 1.0 16.55007505657971 -6.288173357858981 1.3017405217202154 1.1061675307823626 0.5896365534439242 0.862183285006574 0.08401320967311181 0.14323885482619905 0.49304498217961346 0.0410569654217618 0.036181306805382785 5.150230211763733e-07 6.288173357858981 -0.5165309773384384 LFS(ph)QGQDVSNK ddPTM_KYSE-520_SHP099_60min_R1 10 LFSQGQDVSNK 11 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;H0Y948;H0Y8L4;H0Y8U8 A8MQ02 MLLT4 Afadin 1 LFS(1)QGQDVSNK;LFS(1)QGQDVSNK;LFS(0.992)QGQDVS(0.008)NK;LFS(1)QGQDVSNK;LFS(0.995)QGQDVS(0.005)NK;LFS(0.999)QGQDVS(0.001)NK;LFS(1)QGQDVSNK;LFS(0.992)QGQDVS(0.008)NK;LFS(1)QGQDVSNK;LFS(1)QGQDVSNK 169.4 1.3409000000000002e-05 20668560000.0 22437120.0 24688090.0 21798360.0 22037890.0 22303550.0 24227250.0 23881910.0 31143450.0 33176760.0 32591790.0 True False 21192488.226310156 23502037.098821428 23203517.1642092 24132364.439666755 24058712.495159693 24076038.746107936 26296126.52778068 31035420.640885867 27152696.702059764 32303052.096628927 0.6560521947869364 0.7275485000153916 0.7183072700003683 0.747061434550488 0.7447814040355154 0.745317769791185 0.8140446434943801 0.9607581521414397 0.8405613383168012 1.0 24.94516714605482 -7.18762568534705 0.5523926523662351 0.9944559518774875 0.6938351163585355 0.8395196682252671 0.041816888483963394 0.30268186953949106 0.19967577925699284 0.04038044546571833 0.025583039660255415 6.491937269397637e-08 7.18762568534705 -0.300620835518952 LFSLS(ph)NPSLSTTNLSGPSR ddPTM_KYSE-520_SHP099_60min_R1 3 LFSLSNPSLSTTNLSGPSR 19 0 Q6UUV7;Q6UUV7-3 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 LFS(0.014)LS(0.978)NPS(0.005)LS(0.001)T(0.001)TNLSGPSR;LFSLS(0.997)NPS(0.002)LS(0.001)TTNLSGPSR;LFSLS(0.976)NPS(0.023)LS(0.001)TTNLSGPSR 253.53 8.4154e-27 3275730000.0 1259440.0 1504650.0 1410120.0 1171600.0 1241360.0 1293650.0 1231060.0 1549810.0 1808430.0 1523010.0 True False 1189576.3525686045 1432364.3554743063 1501018.5914717726 1282948.5117456159 1339047.969627768 1285575.850494898 1355507.558787789 1544434.0708383727 1480064.6988104319 1509517.316283851 0.7880508158045638 0.9488889859180412 0.9943699057172788 0.8499064554648469 0.8870702940488643 0.8516469712714161 0.8979741697331401 1.0231310725474023 0.9804887183765961 1.0 20.525655876009132 -7.250858923583208 21.440603894506197 1.0013574153113338 0.8917540115678273 0.48037104425697585 0.05374070952824017 92.45875830963391 187364.10105613837 0.02646606189093969 0.01499730853298863 5.612302567163438e-08 7.250858923583208 -0.10960340374350652 LFSS(ph)FLK ddPTM_KYSE-520_SHP099_60min_R1 1 LFSSFLK 7 0 P11171;P11171-2;P11171-5;P11171-7;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y570;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8YCW8;A0A3B3IUD6;A0A3B3ITC5;A0A2R8Y6T6;A0A2R8YFU8 P11171 EPB41 Protein 4.1 1 LFS(0.209)S(0.791)FLK 75.378 0.021254 29851000.0 81583.0 78318.0 100700.0 107360.0 86020.0 71571.0 78657.0 92451.0 100100.0 101290.0 True False 77057.42835832149 74555.4857222854 107191.28312569676 117563.46212103906 92789.28461315064 71124.29884108562 86608.41717834321 92130.30905922569 81924.36331565188 100392.6494024275 0.7675604620158399 0.7426388900588438 1.0677204333557997 1.1710365531821134 0.9242637301183426 0.7084612196654094 0.8626967979614751 0.917699748015595 0.8160394590968025 1.0 16.615294115648954 -6.020334806550036 24.799544470940752 0.8515451733794703 0.9470330330315583 0.06440071335600517 0.13674929273880926 1913.7274768802172 2333905.5546318577 0.04908019293407665 0.04968891298790049 9.542566463035596e-07 6.020334806550036 0.09548785965208795 LFT(ph)LLS(ph)WMLS(ph)VVLLLFLNVK ddPTM_KYSE-520_SHP099_60min_R1 1 LFTLLSWMLSVVLLLFLNVK 20 0 Q5GH70 Q5GH70 XKR9 XK-related protein 9 3 LFT(1)LLS(1)WMLS(1)VVLLLFLNVK 43.523 0.053736 845560000.0 426790.0 459860.0 390160.0 626390.0 568640.0 556670.0 416750.0 617480.0 1003600.0 478720.0 True False 403115.10791522753 437767.63533606747 415310.33787807246 685921.9172689797 613388.7328809809 553195.6160437487 458879.1570880468 615338.1060009159 821371.5386971843 474478.91323852364 0.8495954122888048 0.9226282203946939 0.8752977767618795 1.4456320357574295 1.292762893706567 1.165901372240021 0.9671223404977014 1.2968713441888646 1.731102301451014 1.0 18.85598444694726 -5.244580696593509 24.20077180518844 1.2675347795441119 0.8865191572590384 0.4286196534009288 0.20568315320761218 553.1831961466643 794096.4925636516 0.05752200276923056 0.09924311173151985 5.694024131951321e-06 5.244580696593509 -0.38101562228507346 LFVGEPVWTAYNRPADHFEAR ddPTM_KYSE-520_SHP099_60min_R1 1 LFVGEPVWTAYNRPADHFEAR 21 1 A0A0G2JQN5;Q9BV57-2;Q9BV57;H7C382 A0A0G2JQN5 ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 0 88.036 0.0024181 277350000.0 194340.0 200490.0 103970.0 122500.0 250740.0 180880.0 139700.0 125920.0 158960.0 90751.0 False True 183559.57279281475 190858.1594583748 110672.07255788185 134142.36316903206 270471.8114845547 179751.06082597078 153822.23934061226 125483.21290994892 130096.87105550464 89947.01674320965 2.040752205455132 2.1218953820698365 1.230414043345543 1.4913486630912507 3.0070125867178734 1.998410479128433 1.7101427585948783 1.3950792083320762 1.4463722729895432 1.0 16.45678781220853 -7.2502399406189575 1.8727967082328212 1.2355482036852146 1.9723037101445309 0.3350325073759809 0.4454063024470437 0.4985837220829865 3.2425080973457896 0.35381193374842396 0.14315467732605922 5.620307265868424e-08 7.2502399406189575 0.7367555064593163 LFVGGIKEDTEEHHLR ddPTM_KYSE-520_SHP099_60min_R1 3 LFVGGIKEDTEEHHLR 16 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;; 174.83 9.0577e-08 1298470000.0 1198420.0 1157630.0 1074990.0 671900.0 1186850.0 905480.0 633590.0 664790.0 1243600.0 717290.0 False True 1131941.2536089583 1102015.7171619441 1144285.5754448136 735757.1739858983 1280248.3427472413 899828.5634492475 697639.4604425097 662483.9986531526 1017793.5886048418 710935.3686431759 1.5921858772749968 1.5500926888264783 1.6095493710331066 1.034914292406207 1.8007942764060287 1.2656967189107151 0.9812980071225863 0.9318484181164133 1.431626042951424 1.0 19.439358884385246 -6.512152165300787 10.848078895641294 1.0864914544502913 1.5012387143211272 0.45817403423961334 0.2216216423743499 0.33397652033415565 329.5555620789365 0.07918727865680703 0.0657006915234395 3.0750192205608227e-07 6.512152165300787 0.41474725987083594 LFVGGLK ddPTM_KYSE-520_SHP099_60min_R1 4 LFVGGLK 7 0 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 0 ;;; 127.32 0.016505000000000002 3184070000.0 5441300.0 5994400.0 4312700.0 3412620.0 5574600.0 6277500.0 4861850.0 5451100.0 5004700.0 5089380.0 False True 5139460.24203737 5706420.026222168 4590703.542563976 3736954.3787583825 6013289.3048647875 6238319.793979602 5353333.245083437 5432191.406396303 4095972.6382202012 5044292.052677719 1.0188665105758759 1.1312628148072759 0.9100788563832343 0.7408283144063105 1.1920977695319375 1.236708685546477 1.061265523323866 1.0768986707485884 0.8120014851332585 1.0 22.26622037606727 -3.9586626306287775 18.658316223814964 1.0250421214610992 0.9824092164122464 0.0 0.15099730367223227 263911.60845889646 91406.24768833954 0.03858229296140888 413705.0065930659 0.0001099859902685023 3.9586626306287775 -0.042632905048852754 LFVGNLPADITEDEFKR ddPTM_KYSE-520_SHP099_60min_R1 2 LFVGNLPADITEDEFKR 17 1 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ; 256.45 1.5713999999999998e-24 734660000.0 637420.0 589390.0 454980.0 376730.0 605690.0 544830.0 403090.0 430050.0 510910.0 466870.0 False True 602061.0419347322 561074.8197075734 484308.73879373865 412534.3059319952 653354.3570953177 541429.5138755732 443838.27097929426 428558.2569244249 418141.6229930032 462733.8950193637 1.3010956154606703 1.2125215501753863 1.0466247318525739 0.8915152107340919 1.4119440225315183 1.1700666834724012 0.9591652475786786 0.9261440787831012 0.9036330113131339 1.0 18.819823253878916 -6.779797762857273 6.0946402139831894 0.9391450628059871 1.1669587634706575 0.40844626601051237 0.13257340380848037 0.18289020327477237 23.130426660751816 0.05807885892097918 0.04050024417859514 1.6603599043015055e-07 6.779797762857273 0.22781370066467044 LFVGS(ph)IPK ddPTM_KYSE-520_SHP099_60min_R1 2 LFVGSIPK 8 0 B4DT28;O43390-4;O43390-3;O43390;O43390-2;O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 B4DT28;O60506-2 HNRNPR;SYNCRIP Heterogeneous nuclear ribonucleoprotein R;Heterogeneous nuclear ribonucleoprotein Q 1 LFVGS(1)IPK;LFVGS(1)IPK 100.48 0.0026390999999999997 512850000.0 1219090.0 1098360.0 1032890.0 851940.0 890990.0 876670.0 827200.0 940870.0 1092210.0 998450.0 True False 1151464.647504336 1045593.136928029 1099471.7420824317 932908.1214548995 961105.8439603706 871198.3773457742 910821.4486940193 937606.3415707097 893892.1963735064 989604.5097823464 1.1635604285570496 1.0565767704090159 1.1110213536963867 0.9427080335962529 0.9712019644815041 0.880350047654275 0.9203893471487365 0.9474556070656214 0.903282258252955 1.0 19.916492549352753 -5.276940152495106 5.712467182177826 0.9333635742011385 1.1057519479591738 0.7974882336795195 0.03976682462917305 0.06846607945342917 8.410731040855953 0.010799060224127821 0.017042940710073173 5.28518078647989e-06 5.276940152495106 0.17238837375803528 LFVLLPEQS(ph)PVSYSK ddPTM_KYSE-520_SHP099_60min_R1 4 LFVLLPEQSPVSYSK 15 0 Q96K76-2;Q96K76-4;Q96K76 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 LFVLLPEQS(0.996)PVS(0.004)YSK;LFVLLPEQS(0.974)PVS(0.023)Y(0.001)S(0.002)K;LFVLLPEQS(1)PVSYSK;LFVLLPEQS(1)PVSYSK 220.6 2.6122000000000003e-14 1458883000.0 4776700.0 4955230.0 3801630.0 3103850.0 3395450.0 4628730.0 3656120.0 4356780.0 5043040.0 4111300.0 True False 4511726.92888462 4717173.312848129 4046689.152623069 3398838.9707934684 3662652.59753223 4599840.379129786 4025716.2898926283 4341667.347060097 4127351.0606929534 4074877.0805429956 1.1072056505526326 1.157623461913002 0.9930825084136844 0.8340960729889202 0.898837566173693 1.128829235388086 0.9879356383815592 1.0654719789686393 1.0128774387822677 1.0 21.9583251101487 -4.768954806250526 24.262044976119117 0.9885200355592053 1.1324145677149706 0.3522568027216777 0.07714608959620424 123.23620827502948 397850.0417067557 0.022090960333311545 0.047522591023601846 1.7023356484028036e-05 4.768954806250526 0.1438945321557653 LFVT(ph)PPEGSSR ddPTM_KYSE-520_SHP099_60min_R1 4 LFVTPPEGSSR 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LFVT(0.975)PPEGS(0.012)S(0.012)R;LFVT(0.998)PPEGS(0.001)SR;LFVT(0.999)PPEGS(0.001)SR;LFVT(1)PPEGSSR 148.89 0.00028976 1577520000.0 2228660.0 2377990.0 1882860.0 1542250.0 1765030.0 2069300.0 1610350.0 2029880.0 2463600.0 2223000.0 True False 2105031.787076435 2263747.7909642407 2004232.1682825163 1688824.97630563 1903927.8193530478 2056384.7311321388 1773139.8935014696 2022838.8200575537 2016272.3423020965 2203305.9494678294 0.9553969513788447 1.0274323416187434 0.9096476904474406 0.7664958998152466 0.8641232143964884 0.9333178316106409 0.8047633575036373 0.9180925692803288 0.9151122851500003 1.0 21.07123840986134 -4.914678994386332 5.90126332694799 0.8772297041604712 0.9893691490153976 0.2855760251663261 0.06456873713050136 0.22382131941549396 12.138990634117507 0.016609612005856308 0.03539074976366374 1.2170852680027357e-05 4.914678994386332 0.11213944485492644 LFYVLS(ph)T(ph)LAFSK ddPTM_KYSE-520_SHP099_60min_R1 1 LFYVLSTLAFSK 12 0 Q9BXW9;H7BZJ7;Q9BXW9-3;Q9BXW9-1 Q9BXW9 FANCD2 Fanconi anemia group D2 protein 2 LFY(0.011)VLS(0.993)T(0.993)LAFS(0.002)K 67.563 0.0636 176320000.0 249520.0 252440.0 232360.0 192130.0 244150.0 262250.0 173760.0 212440.0 309350.0 240210.0 True False 235678.62819421195 240312.40347983487 247338.29738914495 210389.97743400914 263363.2159765252 260613.2004733019 191325.35653417886 211703.09522386896 253179.83807889002 238081.92628055206 0.989905583662373 1.0093685280278455 1.0388789323624898 0.8836873118461284 1.1061873536178555 1.0946366427084404 0.8036114270544167 0.8892027149276392 1.0634147750491014 1.0 17.861098578643904 -6.739224484355891 24.99917986788262 0.9298239740064458 1.0184597513200229 0.17479506508399745 0.08563207643817565 399.57326875523427 449653.2747019471 0.03335863855965855 0.025818912843592452 1.8229531845819138e-07 6.739224484355891 0.08863577731357708 LGADES(ph)EEEGR ddPTM_KYSE-520_SHP099_60min_R1 2 LGADESEEEGR 11 0 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 LGADES(1)EEEGR;LGADES(1)EEEGR 191.29 5.3987999999999993e-08 1211680000.0 3296900.0 2905400.0 2724260.0 2747200.0 2959900.0 2841300.0 2702400.0 2745500.0 3314800.0 2759400.0 True False 3114014.384792788 2765820.2229056936 2899870.1585701145 3008293.0620242003 3192827.2904727347 2823566.3927732813 2975584.9648823934 2735976.501304519 2712915.8793079206 2734953.862780715 1.1385985069695728 1.0112858796431747 1.0602994800145271 1.0999428922598251 1.1674154119830327 1.0324000090818612 1.0879836056382397 1.0003739143602095 0.9919421004600101 1.0 21.38308506504808 -7.267231665889479 13.931033216148967 0.9971117728243026 1.0832746983024093 0.46340278735746754 0.043341181051317415 1.126713626394478 2694.2459891363446 0.023002635689001433 0.011773024420458147 5.404659450595975e-08 7.267231665889479 0.08616292547810667 LGADES(ph)EEEGRR ddPTM_KYSE-520_SHP099_60min_R1 1 LGADESEEEGRR 12 1 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 LGADES(1)EEEGRR 190.86 5.2851999999999996e-08 457690000.0 407840.0 374730.0 339070.0 315240.0 308150.0 356970.0 350510.0 352050.0 387980.0 327340.0 True False 385216.3021911165 356727.4083188024 360926.9947311814 345200.3148196379 332399.6518663377 354742.0178187021 385942.9714479456 350828.82071908796 317532.61217988614 324440.0222666663 1.1873267037150443 1.0995172723345403 1.1124613794858067 1.063988075231693 1.024533439321272 1.0933978346454734 1.1895664682538096 1.0813364463115835 0.9787097472176144 1.0 18.307592272919734 -1.0000180347146617 0.02212260340377763 0.4400828784832614 1.9350844465187542 0.3472656103153712 0.054219380717446454 3503.43227157278 5.981060008784654 145.18187572689206 279.12878640414004 0.09999584743970753 1.0000180347146617 1.495001568035493 LGAGEGGEAS(ph)VS(ph)PEKTSTTSK ddPTM_KYSE-520_SHP099_60min_R1 2 LGAGEGGEASVSPEKTSTTSK 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 2 LGAGEGGEAS(0.98)VS(0.735)PEKT(0.076)S(0.083)T(0.089)T(0.019)S(0.018)K;LGAGEGGEAS(1)VS(0.868)PEKT(0.025)S(0.027)T(0.029)T(0.027)S(0.025)K 56.468 0.029775 365190000.0 836520.0 790050.0 763240.0 702300.0 742790.0 740230.0 710410.0 668800.0 981830.0 696380.0 True False 790116.5680387218 752094.8121107739 812439.6716271784 769046.3808458066 801243.3471030236 735609.9499956225 782225.1757334602 666480.088899094 803554.4219201443 690210.6149754425 1.1447470538638904 1.0896598745261736 1.1770895057244009 1.1142198687760967 1.1608678999112922 1.065776060285302 1.1333137433148452 0.9656184278226541 1.1642162616533136 1.0 19.396677136061108 -6.74825104173119 1.3607472316373452 1.0513289764105702 1.1346616596556176 0.270928466685748 0.058161556277037424 0.5703845366212733 2.1369571788367705 0.03295939617947162 0.019456964192263188 1.785455203142191e-07 6.74825104173119 0.08333268324504739 LGAGEGGEASVS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 11 LGAGEGGEASVSPEK 15 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LGAGEGGEASVS(1)PEK;LGAGEGGEAS(0.003)VS(0.997)PEK;LGAGEGGEAS(0.005)VS(0.995)PEK;LGAGEGGEASVS(1)PEK;LGAGEGGEAS(0.001)VS(0.999)PEK;LGAGEGGEASVS(1)PEK;LGAGEGGEASVS(1)PEK;LGAGEGGEASVS(1)PEK;LGAGEGGEASVS(1)PEK;LGAGEGGEASVS(1)PEK;LGAGEGGEASVS(1)PEK 318.62 5.7185e-43 48379900000.0 32735880.0 34146460.0 24735310.0 22228780.0 24157820.0 33096360.0 27889250.0 35881330.0 35647530.0 36613390.0 True False 30919955.479041096 32506012.806718633 26329787.660495333 24341396.56787359 26058902.99480656 32889793.340768605 30708567.562850192 35756866.04099536 29174837.153102867 36289023.8493864 0.8520470434082483 0.8957532983425308 0.725557892374681 0.670764710257842 0.7180932477809591 0.906328962643748 0.8462219234747873 0.98533557114681 0.8039576174379839 1.0 25.113029914013346 -6.275820886011838 24.067614928709506 0.9035681257167771 0.7710402509816194 0.41015165649149343 0.08139173595546902 556.5383038761909 931369.7593398542 0.030319457502553486 0.02687587792566985 5.298819354955798e-07 6.275820886011838 -0.1325278747351577 LGAGEGGEASVS(ph)PEKTSTTSK ddPTM_KYSE-520_SHP099_60min_R1 13 LGAGEGGEASVSPEKTSTTSK 21 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 LGAGEGGEAS(0.001)VS(0.998)PEKTSTTSK;LGAGEGGEAS(0.008)VS(0.988)PEKT(0.003)S(0.001)TTSK;LGAGEGGEASVS(1)PEKTSTTSK;LGAGEGGEAS(0.006)VS(0.994)PEKT(0.001)STTSK;LGAGEGGEAS(0.001)VS(0.999)PEKTSTTSK;LGAGEGGEASVS(0.999)PEKTSTTSK;LGAGEGGEASVS(1)PEKTSTTSK;LGAGEGGEASVS(1)PEKTSTTSK;LGAGEGGEASVS(1)PEKTSTTSK;LGAGEGGEASVS(1)PEKTSTTSK;LGAGEGGEASVS(1)PEKTSTTSK;LGAGEGGEASVS(1)PEKTSTTSK;LGAGEGGEAS(0.001)VS(0.999)PEKTSTTSK 293.2 2.2668e-44 66679710000.0 18174730.0 21574410.0 17487040.0 11981690.0 12848790.0 17266480.0 12650490.0 15891770.0 23640820.0 17736120.0 True False 17166541.496473975 20537942.959750388 18614282.57865325 13120426.21517355 13859916.673385283 17158713.493644435 13929324.986084625 15836645.159036994 19348243.02457468 17578991.77529258 0.9765373188581665 1.1683231451656197 1.058893639441585 0.746369665728749 0.7884363819354824 0.9760920144328841 0.7923847490310797 0.9008847243045834 1.100645774905521 1.0 24.06734899279882 -5.104914010193593 8.376959641372865 0.8907356663469911 1.082526811914709 0.3202240030866309 0.11089791384764092 0.32293122841607524 23.190906166661527 0.030256673212787064 0.05264413211890674 7.85391125752889e-06 5.104914010193593 0.1917911455677178 LGAGGGS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 3 LGAGGGSPEK 10 0 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(1)PEK;LGAGGGS(1)PEK;LGAGGGS(1)PEK 116.24 0.00058435 3612750000.0 6028600.0 5091000.0 4444300.0 4621100.0 4622000.0 5190000.0 5236100.0 5741900.0 5810300.0 5413900.0 True False 5694181.540283843 4846420.7182532055 4730786.689131428 5060287.954615617 4985725.104417363 5157607.284867251 5765416.087411447 5721982.689069529 4755295.985743578 5365937.057950462 1.0611718845727114 0.903182550580329 0.8816329073636894 0.9430390069741913 0.9291434190474231 0.9611755093596303 1.0744472074768554 1.0663529272285315 0.8862004780130386 1.0 22.355398701314463 -6.537968227828103 23.997495229212273 1.0130698578376507 0.9386341272020751 0.16937757531811104 0.0651949822388176 233.2968042651819 371017.4714889875 0.024860139145683243 0.01926519572829697 2.897555559692017e-07 6.537968227828103 -0.07443573063557563 LGAGGGS(ph)PEKS(ph)PSAQELK ddPTM_KYSE-520_SHP099_60min_R1 2 LGAGGGSPEKSPSAQELK 18 1 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 2 LGAGGGS(1)PEKS(0.915)PS(0.085)AQELK;LGAGGGS(1)PEKS(0.914)PS(0.086)AQELK 123.14 9.280200000000001e-05 857060000.0 2953100.0 2515000.0 2423400.0 3168300.0 2668400.0 2533500.0 2451100.0 2484700.0 3192000.0 2338600.0 True False 2789285.6561410977 2394175.624908038 2579616.2415770954 3469414.27941587 2878387.898880852 2517687.4867458916 2698881.1084307423 2476081.15563334 2612413.263771835 2317881.8234032695 1.2033769918630628 1.032915311183876 1.1129196560114225 1.4968037819641051 1.2418182280987087 1.0862018336419128 1.1643739043037422 1.0682516816141177 1.127069222164275 1.0 21.14437558211539 -6.265360103772703 24.073729116532473 1.098144712161837 1.217007816368893 0.22605591581461315 0.11819605805069537 387.4021748976465 2378687.6790470476 0.0445703606757606 0.04080170335798774 5.428000715405262e-07 6.265360103772703 0.11886310420705604 LGAGGGS(ph)PEKSPSAQELK ddPTM_KYSE-520_SHP099_60min_R1 6 LGAGGGSPEKSPSAQELK 18 1 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(0.998)PEKS(0.002)PSAQELK;LGAGGGS(0.984)PEKS(0.016)PSAQELK;LGAGGGS(0.992)PEKS(0.007)PS(0.001)AQELK;LGAGGGS(0.969)PEKS(0.031)PSAQELK;LGAGGGS(0.996)PEKS(0.004)PSAQELK;LGAGGGS(0.973)PEKS(0.027)PSAQELK 255.2 8.6429e-25 42527090000.0 30510700.0 29405200.0 26402200.0 21362400.0 22572830.0 27600330.0 24695060.0 26930490.0 35288000.0 25698370.0 True False 28818210.649427433 27992530.053894978 28104128.05701362 23392676.07316026 24349183.299166054 27428066.10264745 27191477.66535991 26837074.41581362 28880588.73808908 25470702.434829336 1.1314258302519613 1.0990089545240507 1.1033903807294794 0.9184150351963782 0.9559682683061899 1.0768476516431507 1.0675590017563685 1.053644848801495 1.133874843537765 1.0 24.602335411231216 -5.037730749213767 24.96547856600091 1.0305674590473988 1.111713082652206 0.2912506006846025 0.05860270842219488 742.8081311309563 491496.4824391883 0.017319553744128767 0.030008325615634573 9.167886980659738e-06 5.037730749213767 0.08114562360480715 LGAGGGSPEKS(ph)PSAQELK ddPTM_KYSE-520_SHP099_60min_R1 1 LGAGGGSPEKSPSAQELK 18 1 Q9UNE7;H3BS86 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 LGAGGGS(0.14)PEKS(0.86)PSAQELK 243.16 1.7314e-23 6464900000.0 1789700.0 1592100.0 1390100.0 1234100.0 1266400.0 1577200.0 1345600.0 1424300.0 1869500.0 1394900.0 True False 1690421.7733215024 1515613.1262091808 1479708.0702386415 1351388.4929543056 1366058.4751696566 1567356.1097673639 1481626.3797904649 1419359.4357341204 1530045.9262598492 1382542.2712157795 1.2226908417309945 1.0962508400386062 1.0702805267121536 0.9774663104990794 0.9880771847709022 1.1336768085861584 1.0716680499667854 1.0266300461728122 1.1066901592197669 1.0 20.398892160844603 -4.26104969905102 1.947642631608932 1.0469605922522052 1.2758869743587842 0.5532062453133519 0.04794897132155249 0.6218886434963911 2.4954966698247643 0.013517691194221611 0.2567028796334685 5.48214225726784e-05 4.26104969905102 0.228926382106579 LGAHEGLS(ph)PTPFMNSNLMGK ddPTM_KYSE-520_SHP099_60min_R1 2 LGAHEGLSPTPFMNSNLMGK 20 0 H0YNQ5;Q99081;Q99081-3;B4DGI9 H0YNQ5 TCF12 Transcription factor 12 1 LGAHEGLS(0.994)PT(0.006)PFMNSNLMGK;LGAHEGLS(0.999)PT(0.001)PFMNSNLMGK 302.71 9.801499999999999e-45 1848310000.0 885460.0 1009730.0 777970.0 673410.0 713130.0 982300.0 803160.0 1026130.0 1106670.0 1005360.0 True False 836341.7686792514 961221.0551643715 828119.1909960109 737410.6839319016 769249.2738453386 976169.1013343158 884351.2508862298 1022570.5945305418 905726.6248804423 996453.2925582454 0.8393185861547695 0.9646423593990839 0.8310667415930136 0.7400353728961139 0.7719872869007294 0.9796436106183634 0.8874989500168038 1.0262102621039508 0.9089504060497648 1.0 19.926442656647307 -6.2723673533631334 24.818002047695558 0.9575386870102987 0.8320497501572255 0.4935259777135501 0.06631931482538514 653.5585288860549 1484261.7173933655 0.02499942679241672 0.022253665109823725 5.341123826988292e-07 6.2723673533631334 -0.12548893685307316 LGASNS(ph)PGQPNS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 1 LGASNSPGQPNSVK 14 0 P49756 P49756 RBM25 RNA-binding protein 25 2 LGAS(0.001)NS(0.999)PGQPNS(1)VK 167.41 5.0956e-06 0.0 578920.0 571070.0 543480.0 474350.0 476650.0 518950.0 462300.0 442950.0 572800.0 501970.0 True False 546806.1535515921 543634.9400064538 578513.590398746 519432.08138147154 514159.6432324839 515711.040555272 509033.7956132078 441413.50983530696 468793.95911294065 497522.9363267508 1.0990571763157355 1.092683171594362 1.1627877795342567 1.0440364523020338 1.033439075248597 1.036557318066189 1.0231363389423662 0.8872224325863166 0.9422559743156399 1.0 18.924403511373708 -6.355901555853388 0.8315565637874057 0.9411889455123906 1.1121390384271284 0.6917238571503983 0.04138921174584491 0.34527760928641793 0.5102789695132802 0.029130484355841514 0.0250018138812804 4.40654738050734e-07 6.355901555853388 0.17095009291473773 LGASNS(ph)PGQPNSVK ddPTM_KYSE-520_SHP099_60min_R1 12 LGASNSPGQPNSVK 14 0 P49756 P49756 RBM25 RNA-binding protein 25 1 LGASNS(1)PGQPNSVK;LGASNS(1)PGQPNSVK;LGAS(0.003)NS(0.997)PGQPNSVK;LGAS(0.001)NS(0.999)PGQPNSVK;LGASNS(1)PGQPNSVK;LGASNS(1)PGQPNSVK;LGASNS(1)PGQPNSVK;LGASNS(1)PGQPNSVK;LGASNS(1)PGQPNSVK;LGASNS(1)PGQPNSVK;LGASNS(1)PGQPNSVK;LGASNS(1)PGQPNSVK 370.28 1.8892999999999996e-67 154950800000.0 110403500.0 124923500.0 85247200.0 71174300.0 73961700.0 110566500.0 84883800.0 107478700.0 113324600.0 106749800.0 True False 104279197.77107926 118921987.54600377 90742370.91234258 77938684.07266636 79782065.0054924 109876413.4609392 93464682.89005497 107105881.47541729 92747709.32068834 105804079.82208781 0.9855876819346411 1.1239830046816157 0.8576452917971418 0.7366321242405982 0.7540547126315728 1.038489381937815 0.8833750366452613 1.0123038889948146 0.8765986101542201 1.0 26.65682001817287 -9.250066621475776 23.29913817506462 1.0 0.9180144894112312 0.04161913064714917 0.11693409844577905 0.0 0.0 0.12220335501283089 0.02963866708957384 5.622550677379472e-10 9.250066621475776 -0.0819855105887688 LGASNS(ph)PGQPNSVKR ddPTM_KYSE-520_SHP099_60min_R1 1 LGASNSPGQPNSVKR 15 1 P49756 P49756 RBM25 RNA-binding protein 25 1 LGAS(0.005)NS(0.995)PGQPNSVKR 156.67 9.1681e-06 268370000.0 1484600.0 1484000.0 1557200.0 1047100.0 1241200.0 1217700.0 1029400.0 1143900.0 1590000.0 1237600.0 True False 1402246.2785232721 1412706.4124705882 1657579.6036080935 1146616.0691779056 1338875.3785380423 1210099.8826171206 1133461.7979758517 1139932.0778882657 1301296.0806382257 1226635.826838229 1.1431642936255137 1.151691791125956 1.351321694133672 0.9347648618200056 1.0915019350030901 0.9865192717681078 0.9240410015558225 0.9293158188820797 1.060865867575742 1.0 20.226275563396023 -5.276280988972179 24.997114599343362 0.9880168399994729 1.2090225201166698 0.6628050708962243 0.07376291266405685 468.73377717532844 789467.9508635941 0.02100839348937872 0.031302746889620224 5.293208619413126e-06 5.276280988972179 0.2210056801171969 LGATPETDEDLAWDSDNDSS(ph)SSVLQYAGVLK ddPTM_KYSE-520_SHP099_60min_R1 1 LGATPETDEDLAWDSDNDSSSSVLQYAGVLK 31 0 J3QS80;Q8N9M1-3;Q8N9M1-2;Q8N9M1 J3QS80 C19orf47 Uncharacterized protein C19orf47 1 LGATPETDEDLAWDS(0.243)DNDS(0.243)S(0.4)S(0.102)S(0.012)VLQYAGVLK 230.12 3.1254000000000004e-23 81078000.0 83094.0 91719.0 63287.0 74701.0 67775.0 83731.0 70644.0 79599.0 98665.0 95035.0 True False 78484.61017621764 87312.6815669743 67366.58128278023 81800.56058032543 73108.50691300027 83208.40377056255 77785.38493899944 79322.88964754627 80749.92314224549 94193.06383611118 0.833231312156646 0.9269544700116323 0.7151968365737948 0.8684350763093579 0.7761559496589213 0.8833814336407922 0.8258079923415608 0.8421309002705561 0.8572809913343966 1.0 16.523333206503494 -9.079167908671153 0.7082412538294601 1.007356676613176 0.8310891673679234 0.45321701364075107 0.05453933473469091 5.2324233782552625 2.6733624114435917 0.15937512367924722 0.018961837042515816 8.333589257631794e-10 9.079167908671153 -0.1762675092452527 LGDAS(ph)DTEAADGER ddPTM_KYSE-520_SHP099_60min_R1 1 LGDASDTEAADGER 14 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 LGDAS(0.997)DT(0.003)EAADGER 200.55 1.5206e-12 699910000.0 1417100.0 1296400.0 1144000.0 1102000.0 1220800.0 1285700.0 1194800.0 1247800.0 1606900.0 1260600.0 True False 1338490.6380811878 1234118.9980639277 1217744.0704647177 1206733.7486716174 1316870.0145981647 1277675.469393799 1315582.0441242931 1243471.6730387085 1315127.4666525566 1249432.06473196 1.0712792442767456 0.987743978163937 0.9746380814437956 0.9658258201741423 1.0539748832848084 1.0226049942682542 1.0529440385432436 0.995229519185959 1.0525802112615785 1.0 20.25284102934119 -5.769538645015701 24.998093754982506 1.0301389706676298 0.9972031006716955 0.16118598913532522 0.03293339838617829 309.59264545832997 955543.7377327085 0.010120546553994523 0.01167355241759502 1.7000486707377093e-06 5.769538645015701 -0.03293586999593434 LGDASDT(ph)EAADGER ddPTM_KYSE-520_SHP099_60min_R1 1 LGDASDTEAADGER 14 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 LGDAS(0.21)DT(0.79)EAADGER 152.88 9.5087e-05 396790000.0 1081300.0 1101200.0 1012200.0 849290.0 1019600.0 1086100.0 1066100.0 1048000.0 1303600.0 981630.0 True False 1021318.13348189 1048296.6990651027 1077448.0315772616 930006.2662516513 1099836.7192695688 1079321.2470316621 1173871.7921333343 1044364.73260504 1066899.1010817555 972933.5218965827 1.0497306449992483 1.0774597395119156 1.1074220461403612 0.9558785315966385 1.1304335748711876 1.109347373423513 1.2065282629434473 1.0734183878968557 1.096579650171783 1.0 19.891981707082852 LGDDNLCNTPHLPPCS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 4 LGDDNLCNTPHLPPCSPPK 19 0 J3KTI7;J3QR52;J3QLN7;Q99741 J3KTI7 CDC6 Cell division control protein 6 homolog 1 LGDDNLCNTPHLPPCS(1)PPK;LGDDNLCNT(0.001)PHLPPCS(0.999)PPK;LGDDNLCNTPHLPPCS(1)PPK;LGDDNLCNTPHLPPCS(1)PPK 83.24700000000001 0.0018472000000000002 2204410000.0 1411570.0 1528240.0 1212150.0 1137900.0 1215320.0 1587300.0 1274460.0 1586150.0 1611600.0 1809540.0 True False 1333267.3982049685 1454821.0564649932 1290287.1285085739 1246045.6738778912 1310958.7697751017 1577393.0719209623 1403294.8543309725 1580648.0158601918 1318974.0651299153 1793508.8834008174 0.7433848867683623 0.811159102656012 0.7194205395079817 0.6947529981090269 0.7309463487514412 0.8795011201338125 0.7824298320006486 0.8813159669792084 0.7354154068246942 1.0 20.774353460427566 -6.2521521819520816 24.466646033420652 0.8437332987655634 0.7402402307143374 0.3950625317359654 0.07087330886763156 567.1770086512043 1494199.2173084733 0.022455766482296555 0.022155381659211507 5.595614901355126e-07 6.2521521819520816 -0.10349306805122593 LGDSS(ph)LSR ddPTM_KYSE-520_SHP099_60min_R1 3 LGDSSLSR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 LGDS(0.004)S(0.996)LSR;LGDS(0.028)S(0.972)LSR;LGDS(0.161)S(0.839)LSR 183.0 9.800800000000001e-06 1969730000.0 5353200.0 4561090.0 4871530.0 5311700.0 4834940.0 4985500.0 4868300.0 6019700.0 5477300.0 5799100.0 True False 5056247.32466037 4341968.390064331 5185556.6185235875 5816522.370979163 5215422.270954505 4954383.645222675 5360435.274029364 5998819.065708544 4482760.391496694 5747724.4856315255 0.8796954929381623 0.755423890083566 0.9021929689717599 1.0119695864893354 0.9073890517877642 0.8619730569215545 0.9326186889141385 1.0436859109556693 0.7799191493438737 1.0 22.454559477894037 -4.940244442542513 7.514575608992386 0.9335236984115834 0.8190077835128757 0.2604915400300071 0.07735969571570929 0.2908578020347523 30.855013096106234 0.01942573236189905 0.040731294402290306 1.1475075653462428e-05 4.940244442542513 -0.11451591489870772 LGDVS(ph)PTQIDVSQFGSFK ddPTM_KYSE-520_SHP099_60min_R1 11 LGDVSPTQIDVSQFGSFK 18 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 LGDVS(1)PTQIDVSQFGSFK;LGDVS(0.989)PT(0.011)QIDVSQFGSFK;LGDVS(1)PTQIDVSQFGSFK;LGDVS(1)PTQIDVSQFGSFK;LGDVS(0.951)PT(0.049)QIDVSQFGSFK;LGDVS(0.989)PT(0.011)QIDVSQFGSFK;LGDVS(0.994)PT(0.006)QIDVSQFGSFK;LGDVS(0.984)PT(0.016)QIDVSQFGSFK;LGDVS(1)PTQIDVSQFGSFK;LGDVS(0.885)PT(0.115)QIDVSQFGSFK;LGDVS(1)PTQIDVSQFGSFK 395.34 6.9805e-87 23547179000.0 5050703.0 4994741.0 3924506.0 4014356.0 4037247.0 5298031.0 4644004.0 6152238.0 5572376.0 5744234.0 True False 4770530.436263184 4754786.145100909 4177485.936191621 4395879.18727986 4354955.370106813 5264964.023324182 5113465.245431362 6130897.322321149 4560572.986567612 5693344.555706427 0.8379135303662048 0.835148145097805 0.7337490108524234 0.7721084055722359 0.7649203956472035 0.9247576660448418 0.8981478628947805 1.0768533789468553 0.8010358308626445 1.0 22.440844982203945 -6.333106787342519 4.470121287322836 0.9452621992648838 0.7872842688703748 0.5243534237668515 0.07212312402230779 0.178298967826662 6.859880401312065 0.025175734130547182 0.022265662080084413 4.64401071022982e-07 6.333106787342519 -0.15797793039450891 LGDVYVNDAFGTAHR ddPTM_KYSE-520_SHP099_60min_R1 2 LGDVYVNDAFGTAHR 15 0 P00558-2;P00558;P07205 P00558-2 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 0 ; 155.26 1.7844e-05 0.0 1422030.0 1334170.0 896430.0 880200.0 1359940.0 1333250.0 952410.0 1122970.0 1145530.0 1065980.0 False True 1343147.161153475 1270074.4705700031 954215.3121387127 963853.9433582213 1466959.540999861 1324928.6922060242 1048688.8974258588 1119074.6791731678 937530.6284613244 1056536.2465198906 1.2712740954961537 1.2021115931928346 0.9031543548853991 0.9122772138987619 1.3884611586510711 1.2540305139271724 0.9925725699237673 1.0591919424054514 0.8873624842966277 1.0 20.010910831890435 -6.80249180705663 19.01426627110069 0.9897096591250241 1.1454507674650771 0.24022461835840592 0.14777680969061727 23.96581162131665 11098.006141336247 0.06806549493011288 0.04589480412150233 1.5758257503363585e-07 6.80249180705663 0.15574110834005306 LGEAS(ph)DSELADADK ddPTM_KYSE-520_SHP099_60min_R1 1 LGEASDSELADADK 14 0 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LGEAS(0.983)DS(0.017)ELADADK 200.63 4.7005e-07 0.0 1065400.0 1015000.0 911770.0 904390.0 969640.0 990650.0 910810.0 1006800.0 1118900.0 929240.0 True False 1006300.1381777534 966237.8764539391 970544.1530835802 990342.9536852307 1045945.1515030834 984466.9858870419 1002883.5634489855 1003307.6457888873 915735.9651736552 921007.6565377804 1.0926077878229608 1.0491094939277559 1.053785108293253 1.0752819986405902 1.1356530470495365 1.0689020649272511 1.0888981826915425 1.0893586374303186 0.994276169881212 1.0 19.81285362424221 -7.763684229488976 24.99998276165126 0.9971380347208966 1.081080632553236 0.687206073060262 0.02281707088607514 35.492812557039905 395224.2196235557 0.019954221377078533 0.006118721825536675 1.7231209810261246e-08 7.763684229488976 0.08394259783233948 LGEKLS(ph)DEEVDEMIR ddPTM_KYSE-520_SHP099_60min_R1 6 LGEKLSDEEVDEMIR 15 1 P27482 P27482 CALML3 Calmodulin-like protein 3 1 LGEKLS(1)DEEVDEMIR;LGEKLS(1)DEEVDEMIR;LGEKLS(1)DEEVDEMIR;LGEKLS(1)DEEVDEMIR;LGEKLS(1)DEEVDEMIR;LGEKLS(1)DEEVDEMIR 229.59 3.9307e-15 2708150000.0 3647300.0 3748170.0 3205310.0 3387550.0 3794000.0 3582180.0 3148010.0 3442460.0 4434430.0 3443070.0 True False 3444976.998287705 3568102.287082127 3411929.4112773337 3709501.7334959526 4092566.215092925 3559822.2858777978 3466241.5724168997 3430518.909736202 3629249.2948833695 3412567.0784679228 1.0094972257173425 1.0455771872135717 0.9998131414926281 1.0870121079528607 1.1992632294074315 1.0431508609278342 1.0157284802656756 1.0052605064913007 1.0634953720859097 1.0 21.702425973692755 -9.715217805364334 10.17647780535512 1.0000047338221636 1.053005877894558 0.07237292910968163 0.05585845303479681 0.0 0.0 0.0587645506630307 0.014252497025037407 1.9265584721546064e-10 9.715217805364334 0.05300114407239431 LGELS(ph)DKIGSTIDDTISK ddPTM_KYSE-520_SHP099_60min_R1 1 LGELSDKIGSTIDDTISK 18 1 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 LGELS(1)DKIGSTIDDTISK 104.53 0.00028338 105180000.0 144270.0 127360.0 98117.0 123700.0 125410.0 117950.0 112080.0 118040.0 150740.0 120110.0 True False 136267.055504885 121241.4344287426 104441.77881275059 135456.4108082388 135279.0535147082 117213.83029866891 123410.14019538893 117630.54679074317 123369.41584616719 119045.91884416594 1.1446596139365515 1.0184425943022093 0.8773234717056322 1.1378501012332445 1.1363602786903755 0.9846102364256999 1.0366599829174814 0.9881107049517966 1.0363178934983972 1.0 16.861158637134885 LGELTMQLHPVADS(ph)SPAGAK ddPTM_KYSE-520_SHP099_60min_R1 1 LGELTMQLHPVADSSPAGAK 20 0 F8W038;H0YIS7;Q8IXM2;Q8IXM2-3 F8W038 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.696)S(0.304)PAGAK 128.98 1.6214e-05 387300000.0 164490.0 185150.0 183030.0 145070.0 148430.0 189460.0 148800.0 186150.0 243000.0 190480.0 True False 155365.4117973143 176255.11608418397 194828.4066583542 158857.40918311404 160110.5965488253 188277.5098633815 163842.1561480536 185504.28909773644 198877.32553150225 188792.49539119747 0.8229427312530679 0.933591749602998 1.0319711398202014 0.8414392153350436 0.8480771241307006 0.9972722139894975 0.867842526306757 0.9825829607969981 1.0534175371717396 1.0 17.52644189232996 -7.475818000826943 4.992222658356955 1.0252214519821399 0.9111518512692196 0.3664746662030166 0.06519270725302555 0.22178109076810795 12.700390469061354 0.03990745144650667 0.017386682077604965 3.3433512001743435e-08 7.475818000826943 -0.11406960071292027 LGELTMQLHPVADS(ph)SPAGAQIK ddPTM_KYSE-520_SHP099_60min_R1 3 LGELTMQLHPVADSSPAGAQIK 22 0 Q8IXM2-2 Q8IXM2-2 BAP18 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.5)S(0.5)PAGAQIK;LGELTMQLHPVADS(0.622)S(0.378)PAGAQIK;LGELTMQLHPVADS(0.649)S(0.351)PAGAQIK 149.62 4.0480000000000004e-10 463900000.0 475821.0 544909.0 398383.0 375284.0 356673.0 497786.0 398911.0 452836.0 565145.0 469932.0 True False 449426.260604353 518730.75371491566 424063.4056153376 410950.8785267509 384741.13590823335 494679.13292965834 439236.81687618507 451265.2176087165 462528.9141460941 465768.7680815631 0.9649128310072772 1.113708752631688 0.9104590832957647 0.8823066437438485 0.8260346383741629 1.0620702091451366 0.9430362166302831 0.9688610498024917 0.9930440721716626 1.0 18.82925437795191 -9.24627889524272 14.437487248863377 1.0000138510302181 0.9617581495303036 0.019682416285155657 0.07868050944309452 0.0 0.0 0.07958922521614456 0.019303222483955097 5.671802565990177e-10 9.24627889524272 -0.03825570149991453 LGELTMQLHPVADSS(ph)PAGAK ddPTM_KYSE-520_SHP099_60min_R1 1 LGELTMQLHPVADSSPAGAK 20 0 F8W038;H0YIS7;Q8IXM2;Q8IXM2-3 F8W038 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.037)S(0.963)PAGAK 202.15 1.2392000000000002e-13 312120000.0 281810.0 280420.0 260940.0 234900.0 209310.0 289740.0 232100.0 252160.0 345790.0 263760.0 True False 266177.43752569275 266948.2022809988 277760.6099187615 257224.82537473956 225781.506189009 287931.6251864041 255562.93307770995 251285.3158145865 283003.25265653554 261423.2916021748 1.0181856249088648 1.021133964938486 1.0624937365621125 0.98393996876979 0.8636625482192907 1.1014000451978425 0.9775828753109613 0.9612200744415079 1.0825479662584938 1.0 17.996028158730013 -5.282684283380289 24.257697562432877 0.9922885797540106 1.032657399372753 0.07054232474670286 0.062561833379971 1462.0313871313538 1669363.5564178478 0.017613431375635362 0.02615803168244232 5.215737388493655e-06 5.282684283380289 0.04036881961874239 LGELTMQLHPVADSS(ph)PAGAQIK ddPTM_KYSE-520_SHP099_60min_R1 5 LGELTMQLHPVADSSPAGAQIK 22 0 Q8IXM2-2 Q8IXM2-2 BAP18 Chromatin complexes subunit BAP18 1 LGELTMQLHPVADS(0.272)S(0.728)PAGAQIK;LGELTMQLHPVADS(0.237)S(0.763)PAGAQIK;LGELTMQLHPVADS(0.043)S(0.957)PAGAQIK;LGELTMQLHPVADS(0.206)S(0.794)PAGAQIK;LGELTMQLHPVADS(0.006)S(0.994)PAGAQIK 267.83 2.9227e-36 3418480000.0 1521810.0 1780480.0 1369730.0 1465380.0 1327010.0 1751540.0 1320550.0 1597780.0 2010040.0 1472950.0 True False 1437392.1656469754 1694943.068245036 1458024.987445488 1604649.274617436 1431438.137345931 1740607.9891592283 1454044.0813260244 1592237.6741046547 1645067.4049849422 1459900.8089377605 0.9845820735539131 1.160998786950666 0.9987151034640241 1.0991495208397042 0.9805036948965462 1.1922782551409867 0.9959882701784394 1.0906478470021426 1.1268350527060196 1.0 20.477438919720605 LGELWEEMALS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 10 LGELWEEMALSPR 13 0 Q9NWQ4-4;Q9NWQ4;G3V5D0;G3V290;G3V553;Q9NWQ4-1 Q9NWQ4-4 GPATCH2L G patch domain-containing protein 2-like 1 LGELWEEMALS(1)PR;LGELWEEMALS(1)PR;LGELWEEMALS(1)PR;LGELWEEMALS(1)PR;LGELWEEMALS(1)PR;LGELWEEMALS(1)PR;LGELWEEMALS(1)PR;LGELWEEMALS(1)PR;LGELWEEMALS(1)PR;LGELWEEMALS(1)PR 231.58 1.2215e-12 2484518000.0 1683474.0 1674544.0 1496385.0 1428289.0 1534148.0 1487587.0 1361196.0 1488405.0 1837899.0 1485874.0 True False 1590088.3412977834 1594096.3926982135 1592844.3714006536 1564033.1571292523 1654876.7194919297 1478302.4177406204 1498798.9756727563 1483242.070451337 1504182.8712634684 1472710.3123524785 1.079702048638342 1.0824235963635205 1.081573448654865 1.0620100531725731 1.123694663921014 1.0037971523260465 1.0177147284849282 1.0071512761270986 1.021370502159869 1.0 20.490042244073983 -6.277982274098877 24.999990566205735 1.0109354308860359 1.0841232519000155 0.8557070515688462 0.015567713689043325 287.17208024669975 433979.73313685827 0.005221167307342508 0.004617506459639013 5.272513809573957e-07 6.277982274098877 0.07318782101397958 LGEMWNNTAADDKQPYEK ddPTM_KYSE-520_SHP099_60min_R1 1 LGEMWNNTAADDKQPYEK 18 1 P09429;Q5T7C4 P09429 HMGB1 High mobility group protein B1 0 206.7 1.1167e-13 822190000.0 426690.0 369750.0 271750.0 264800.0 490820.0 389200.0 342770.0 408720.0 326630.0 417980.0 False True 403020.6551145727 351986.65499393514 289267.4398153732 289966.51238497667 529444.7416162123 386770.8584335907 377420.5367128252 407302.24571596505 267322.22567224095 414277.0223835193 0.9728288882540874 0.8496407861792574 0.6982464008046825 0.6999338527555085 1.2779968789243539 0.9336044181459221 0.9110342025279549 0.9831639789544078 0.6452740828690371 1.0 18.660236278792926 -4.238732291185662 20.945665082583968 0.8906457500598689 0.9728296805202763 0.020125910746976117 0.17552698221984814 3524.8799926739894 3250963.96412983 0.044954992144550954 1.616477893937924 5.771221047180533e-05 4.238732291185662 0.0821839304604074 LGEVVNTHGPVEPDKDNIR ddPTM_KYSE-520_SHP099_60min_R1 1 LGEVVNTHGPVEPDKDNIR 19 1 P30419;K7EN82;P30419-2 P30419 NMT1 Glycylpeptide N-tetradecanoyltransferase 1 0 114.46 4.1357e-05 671920000.0 283680.0 287870.0 164160.0 160050.0 274070.0 221560.0 205130.0 229480.0 218290.0 188560.0 False True 267943.7048979401 274040.2930983209 174742.0162652869 175261.10387921272 295637.7497550123 220177.1618564911 225866.54227587552 228683.9874410346 178654.03864309337 186889.50509746032 1.4337011848696968 1.4663225361713736 0.9350017603939895 0.9377792711678297 1.581885240697926 1.1781141040620324 1.2085565861929444 1.2236320456934113 0.9559340346582208 1.0 17.511826030309795 -1.000000000246301 0.09118442595292743 0.8658659462044003 2.1949612637744713 0.19042544707773612 0.2032784193089994 314.6501724383856 2.0640697530025074 3.870684428467099 52.299630236906715 0.09999999994328711 1.000000000246301 1.329095317570071 LGEWVGLCK ddPTM_KYSE-520_SHP099_60min_R1 4 LGEWVGLCK 9 0 P25398 P25398 RPS12 40S ribosomal protein S12 0 ;;; 128.69 0.0052585 1417867000.0 1778820.0 1968690.0 1227710.0 1205073.0 1953740.0 2055080.0 1465880.0 1567060.0 1489450.0 1620990.0 False True 1680145.3086102423 1874111.1773360644 1306850.1510054541 1319602.775601591 2107488.2227400206 2042253.4834267816 1614065.4560101407 1561624.2346145539 1219003.4259789977 1606629.2897111378 1.045757922732955 1.1664863757544333 0.8134111330936945 0.8213486359624674 1.3117451774571682 1.2711416980291492 1.0046284269474135 0.9719879032550965 0.758733476219749 1.0 20.615605652293343 -7.371587168919986 2.9915667898544815 0.8793610967229151 1.0660071711721204 0.1630009582556845 0.1645586122646102 0.5242681595945833 8.848604312085353 0.11948571237355274 0.04906855809293799 4.2502339015937015e-08 7.371587168919986 0.18664607444920533 LGFEEFK ddPTM_KYSE-520_SHP099_60min_R1 1 LGFEEFK 7 0 K7EIV0;K7EKD8;K7ELJ7;A0A0C4DGQ5;Q96L46;P04632;U3KPR7;U3KQE2;A0A075B7C0 K7EIV0 CAPNS1;CAPNS2 Calpain small subunit 2;Calpain small subunit 1 0 117.93 0.019877000000000002 605490000.0 774930.0 858210.0 539310.0 460360.0 721410.0 772340.0 611430.0 640250.0 564850.0 633560.0 False True 731943.0881153444 816980.3034005279 574074.7855265096 504112.47598771926 778180.8627385831 767519.5395750237 673239.3113817516 638029.122185474 462287.47870974976 627947.1513022212 1.1656125624544342 1.3010335371476636 0.9142087583899499 0.8027944309362711 1.2392457886381218 1.2222677306256755 1.072127343814849 1.0160554448926873 0.7361885116463535 1.0 19.26028361991912 -7.559003163098104 5.802535719270064 0.8664735670777478 1.0977512984841324 0.2659251118241761 0.15420899235936528 0.26562048502792984 23.961698909643076 0.11326123489875174 0.04229201360872555 2.76055775016985e-08 7.559003163098104 0.23127773140638463 LGFKS(ph)PTSK ddPTM_KYSE-520_SHP099_60min_R1 2 LGFKSPTSK 9 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 LGFKS(0.803)PT(0.098)S(0.098)K;LGFKS(0.923)PT(0.069)S(0.008)K 115.14 0.0013355 1107400000.0 1890270.0 1723160.0 1687660.0 1481540.0 1642830.0 1638540.0 1578500.0 1626770.0 1920530.0 1673610.0 True False 1785412.9549401777 1640376.8070841103 1796449.2639514734 1622345.116158758 1772111.3745759393 1628313.264074449 1738070.1846754234 1621127.114560972 1571810.164621465 1658783.1174488785 1.0763389958333127 0.9889037269724109 1.0829922520035762 0.9780332938605258 1.0683201172805241 0.9816312011775894 1.0477983326406675 0.9772990196899162 0.947568219188791 1.0 20.661693838477934 -7.330375258400671 6.400510990577126 0.9708824717681206 1.0296435945122773 0.31211665666911903 0.03859860146259337 0.2759880038447919 20.69896255573196 0.019447531801463854 0.009223780588431249 4.673311625602137e-08 7.330375258400671 0.05876112274415668 LGFS(ph)LT(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 LGFSLTPSK 9 0 P38432 P38432 COIL Coilin 2 LGFS(0.973)LT(0.877)PS(0.15)K 71.085 0.051226999999999995 59830000.0 242450.0 265570.0 246760.0 223720.0 246640.0 246290.0 230620.0 241570.0 300020.0 252390.0 True False 229000.81518790746 252811.6185713031 262666.54442995996 244982.28153612916 266049.16481036344 244752.8127533634 253933.3202343024 240732.05005286168 245543.93088872966 250154.02095644892 0.9154392734217766 1.010623845280172 1.0500192778259976 0.979325779371661 1.0635414285692486 0.9784084693804468 1.0151078893851218 0.9623353209851958 0.9815709935419272 1.0 17.932457116722677 -9.737080146352064 16.836704259092155 0.999999999999918 0.9978964365310397 0.0 0.040668444221347674 0.0 0.0 0.038667771832434736 0.00937831221014187 1.8319763113122309e-10 9.737080146352064 -0.0021035634688783 LGFSLT(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 5 LGFSLTPSK 9 0 P38432 P38432 COIL Coilin 1 LGFS(0.012)LT(0.987)PSK;LGFS(0.062)LT(0.927)PS(0.011)K;LGFS(0.001)LT(0.999)PSK;LGFS(0.001)LT(0.998)PS(0.001)K;LGFS(0.001)LT(0.987)PS(0.011)K 153.11 0.0011005000000000001 12711500000.0 13312080.0 14528530.0 10675000.0 8360280.0 9647250.0 12799310.0 8989680.0 10629390.0 12956700.0 12655340.0 True False 12573632.385426428 13830557.611031888 11363127.580603907 9154838.497590158 10406433.689656097 12719424.758627031 9898444.585222013 10592519.127008267 10604089.891827233 12543223.533305531 1.0024243251378047 1.1026318373668578 0.9059176495126503 0.7298632981610886 0.8296458770765187 1.0140475233382902 0.7891467898135642 0.8444814125238512 0.8454038839115485 1.0 23.580404823984487 -4.887839609326325 5.341623783033661 0.8569554625097415 1.0502254461752811 0.4281092982520853 0.08503383375809032 0.17350411614529976 7.374030167127405 0.02218842227596109 0.04798104630548901 1.2946738932942937e-05 4.887839609326325 0.1932699836655396 LGFSSPYEGVLNKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 LGFSSPYEGVLNKSPK 16 1 M0R0P8;Q13459-2;Q13459;M0R240;M0QXP0 M0R0P8 MYO9B Unconventional myosin-IXb 1 LGFSSPYEGVLNKS(1)PK 106.86 0.00025320000000000003 0.0 1338900.0 1450000.0 1405200.0 1271900.0 1199800.0 1059900.0 1176500.0 1189500.0 1778500.0 1051300.0 True False 1264628.54796902 1380339.8235056289 1495781.4403994957 1392780.9935893214 1294217.4340718198 1053284.7709500578 1295432.101533502 1185373.9021313877 1455569.2323365295 1041986.2998990228 1.2136709936508503 1.3247197430900919 1.4355096996423555 1.336659602649568 1.2420676108670914 1.0108432049942786 1.2432333339306287 1.1376098728421482 1.3969178217387181 1.0 19.990904878420753 -5.936971274045851 4.592862858124251 1.1672615642420425 1.333407723350337 0.315376461964742 0.11711042584262668 0.2605886393906886 11.029705508294246 0.036758614357048275 0.041568293991583724 1.1561887145559056e-06 5.936971274045851 0.16614615910829444 LGFSSS(ph)PTKK ddPTM_KYSE-520_SHP099_60min_R1 2 LGFSSSPTKK 10 1 Q8IVF2;Q8IVF2-3;Q8IVF2-2 Q8IVF2 AHNAK2 Protein AHNAK2 1 LGFSS(0.007)S(0.992)PT(0.001)KK;LGFSS(0.265)S(0.734)PTKK 132.5 0.00021029 1767770000.0 4076400.0 3810400.0 3059500.0 2840400.0 3117300.0 3478000.0 3045600.0 3421700.0 4392700.0 3242600.0 True False 3850273.965898064 3627342.664472994 3256720.2653730796 3110350.7620026004 3362613.7749892375 3456292.511901405 3353478.9701916175 3409830.921330785 3595096.4109556833 3213873.086704624 1.1980168046542186 1.1286514951317899 1.013331944825609 0.967788919503299 1.046280822008789 1.0754290597844822 1.0434385178632364 1.0609724868840693 1.1186180393457759 1.0 21.615881528580804 -4.5569481652168236 3.7474059971362013 1.0421304922857662 1.1879991112018164 0.62311743744409 0.03974031816984608 0.14475414081497684 4.215834524054707 0.011059021394068884 0.039045812412684185 2.773651131251232e-05 4.5569481652168236 0.1458686189160503 LGGAVPFAPPEVS(ph)PEQAK ddPTM_KYSE-520_SHP099_60min_R1 14 LGGAVPFAPPEVSPEQAK 18 0 A0A096LP25;A0A096LNZ0;Q6ZSR9 A0A096LP25 AAK1 Uncharacterized protein FLJ45252 1 LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK;LGGAVPFAPPEVS(1)PEQAK 321.68 6.734499999999999e-48 16139744000.0 7999450.0 9908520.0 6877990.0 5775698.0 6421670.0 9211200.0 6511220.0 8805280.0 9771410.0 8853100.0 True False 7555704.561991783 9432499.826208264 7321356.240573105 6324618.60139307 6927018.89469578 9153709.484078854 7169437.660983402 8774736.538847797 7997168.261200729 8774668.421607576 0.8610814903712941 1.07496937468096 0.8343741197723555 0.7207814925312425 0.789433692746501 1.043197194954728 0.8170608069164983 1.0000077629417943 0.9113926449354761 1.0 23.06491317901025 -6.250015249013719 24.956817171276 0.9457527416546194 0.8595580891829827 0.1849920740348393 0.10214645538200505 1591.1831920060588 3476053.3390131397 0.03608838504351466 0.035788955034847365 5.62321580523088e-07 6.250015249013719 -0.08619465247163671 LGGDEDGYEEEEDENSRQS(ph)EDDDS(ph)ETEKPEADDPK ddPTM_KYSE-520_SHP099_60min_R1 1 LGGDEDGYEEEEDENSRQSEDDDSETEKPEADDPK 35 2 J3KS14;F5H478;J3KRU5;J3QLH3;J3QQJ0;Q9UHR5 J3KS14 SAP30BP SAP30-binding protein 2 LGGDEDGYEEEEDENS(0.001)RQS(0.999)EDDDS(0.994)ET(0.006)EKPEADDPK 219.5 9.044799999999999e-23 900970000.0 1019300.0 969720.0 820790.0 921870.0 898470.0 895000.0 963800.0 995930.0 1052500.0 943570.0 True False 962757.3970758255 923133.1956206057 873699.4367104339 1009484.2476296773 969174.4774049924 889413.9730166064 1061230.309781546 992475.3512818104 861392.5313658683 935210.7038863512 1.029455066195245 0.9870857891001928 0.9342273704521327 1.0794190479585786 1.0363167074302098 0.9510305745224767 1.134749961021093 1.0612318134913243 0.921067870359348 1.0 19.834931916662438 -5.262115565421259 24.99892916732815 1.0306157058552656 0.983939049951686 0.08847451392882033 0.06166057335255523 140.82740247155704 5206589.327016767 0.017260291054188127 0.02735993121346794 5.468704217400183e-06 5.262115565421259 -0.04667665590357961 LGGKPSS(ph)PSLS(ph)PLMGFGSNK ddPTM_KYSE-520_SHP099_60min_R1 1 LGGKPSSPSLSPLMGFGSNK 20 1 R4GN62;A0A087WZG6;A0A087X1S9;Q8TEW8-5;Q8TEW8-2;Q8TEW8;A0A087WYL6;Q8TEW8-6;Q8TEW8-3 R4GN62 PARD3B Partitioning defective 3 homolog B 2 LGGKPS(0.17)S(0.827)PS(0.064)LS(0.939)PLMGFGSNK 93.637 0.00090755 242890000.0 341900.0 319800.0 254320.0 329340.0 347940.0 301860.0 307450.0 377780.0 457310.0 352610.0 True False 322934.12543924764 304436.32797041384 270713.8741263876 360640.37458031834 375320.8984922062 299975.9797707186 338530.04642284324 376469.5693545144 374274.0318469603 349486.14972642926 0.9240255320333409 0.8710969753986545 0.7746054438446187 1.0319160712452278 1.0739220961574583 0.8583343860852105 0.9686508226086721 1.0772088383165033 1.0709266508556476 1.0 18.41487575659852 -5.276315728711853 24.8472761127794 1.0092080371822294 0.8580280808289849 0.5064576289897209 0.07008223681320974 637.0453640449123 1064025.9543849546 0.021178545441848804 0.03156238416289059 5.2927852262023925e-06 5.276315728711853 -0.15117995635324455 LGGKS(ph)PPPPPPPPR ddPTM_KYSE-520_SHP099_60min_R1 1 LGGKSPPPPPPPPR 14 1 Q5T5P2-3;Q5T5P2;Q5T5P2-4;Q5T5P2-8;Q5T5P2-6;Q5T5P2-9;Q5T5P2-2;Q5T5P2-7;Q5T5P2-10 Q5T5P2-3 KIAA1217 Sickle tail protein homolog 1 LGGKS(1)PPPPPPPPR 75.548 0.010091 715530000.0 1097600.0 1071500.0 1010800.0 813860.0 817850.0 1051800.0 865230.0 1121700.0 1340200.0 1176600.0 True False 1036713.9399886454 1020023.5316457107 1075957.7853371825 891209.009704069 882210.1420700442 1045235.3260545995 952695.892231052 1117809.0845067492 1096853.4636926716 1166176.2393809494 0.8889856481203668 0.8746735675108402 0.9226373758981247 0.7642146869474519 0.7564981280516869 0.8962927649850335 0.8169398930103217 0.9585250039909273 0.940555489515824 1.0 20.153354402860295 -7.271893954462632 23.233568577158415 0.9621552339334386 0.8451939517869793 0.5166331578481945 0.05341364166403647 253.85790397225102 564149.8767274753 0.030624873300648173 0.015003356496671325 5.34694904657623e-08 7.271893954462632 -0.11696128214645929 LGGLRPES(ph)PES(ph)LTSVSR ddPTM_KYSE-520_SHP099_60min_R1 1 LGGLRPESPESLTSVSR 17 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 LGGLRPES(1)PES(1)LTSVSR 168.64 2.0064999999999998e-08 709250000.0 497870.0 446670.0 478660.0 437060.0 466510.0 423560.0 447320.0 474930.0 595000.0 446770.0 True False 470252.15862076124 425211.30273466144 509515.1894830783 478598.0509931189 503221.6829211908 420916.4049283952 492539.47102249647 473282.5786794955 486962.99872939824 442811.9653818007 1.0619680482556542 0.9602525134297948 1.1506355503374097 1.080815534378035 1.1364229566093673 0.9505533676477627 1.1122993720321441 1.0688116303980686 1.0997060531314453 1.0 18.756334680665937 -4.748641503519449 24.999954016988262 1.0766655890514523 1.0111103211307466 0.14622101952123623 0.061544280366922444 413.7330305839817 808190.8147530466 0.014991358509908678 0.03911315925083899 1.78385067266885e-05 4.748641503519449 -0.06555526792070565 LGGLRPES(ph)PESLTSVSR ddPTM_KYSE-520_SHP099_60min_R1 14 LGGLRPESPESLTSVSR 17 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LGGLRPES(0.999)PES(0.001)LTSVSR;LGGLRPES(0.992)PES(0.008)LTSVSR;LGGLRPES(0.998)PESLTS(0.001)VSR;LGGLRPES(0.898)PES(0.101)LT(0.001)SVSR;LGGLRPES(0.996)PES(0.004)LTSVSR;LGGLRPES(1)PESLTSVSR;LGGLRPES(0.7)PES(0.141)LT(0.141)S(0.01)VS(0.007)R;LGGLRPES(1)PESLTSVSR;LGGLRPES(0.999)PES(0.001)LTSVSR;LGGLRPES(0.618)PES(0.318)LT(0.057)S(0.007)VSR;LGGLRPES(1)PESLTSVSR;LGGLRPES(0.982)PES(0.002)LT(0.003)S(0.014)VSR;LGGLRPES(0.959)PES(0.037)LT(0.003)SVSR;LGGLRPES(0.845)PES(0.03)LT(0.022)S(0.101)VS(0.003)R 277.25 2.4349999999999998e-30 291001200000.0 41262000.0 37936120.0 33239170.0 28050000.0 29683290.0 35631980.0 31263800.0 36516140.0 42154820.0 37705170.0 True False 38973114.60624228 36113611.85192302 35381820.082752414 30715863.566460006 32019196.048182815 35409587.59580812 34424250.00928447 36389474.03327118 34500567.32453448 37371131.52797837 1.042866860401713 0.9663505057342486 0.9467687660531062 0.8219141971514614 0.8567895789885634 0.9475117864520181 0.921145509964351 0.9737321976999209 0.9231876561913893 1.0 25.1554209106995 -9.644143112604178 14.150527034239772 1.0000167288159223 0.9304415799398231 0.10418329401379423 0.058054102221159205 0.0 0.0 0.06079080242094266 0.014743935261623556 2.269116988932822e-10 9.644143112604178 -0.06957514887609917 LGGLRPESPES(ph)LTSVSR ddPTM_KYSE-520_SHP099_60min_R1 1 LGGLRPESPESLTSVSR 17 1 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 LGGLRPES(0.361)PES(0.5)LT(0.069)S(0.069)VS(0.001)R 83.41799999999999 0.0059248999999999994 1940000000.0 992750.0 988030.0 784690.0 714980.0 766510.0 929640.0 755140.0 978550.0 1040500.0 911820.0 True False 937680.178501939 940563.5557367337 835272.3729483908 782931.4842334237 826829.9761546849 923837.771927552 831476.9206561925 975155.6384452858 851571.4288704853 903741.9841852249 1.0375529685580684 1.0407434557604465 0.9242376558409385 0.8663219125968583 0.9148960550948836 1.022236200258467 0.9200379480054991 1.0790199586936802 0.9422727324527539 1.0 19.78555142045353 -7.234419010639648 24.995781580932164 1.0079848185482356 0.9594813068635407 0.10166953520632349 0.06287220466412141 1758.3945930515843 1626644.6165275848 0.03149289167834595 0.018173395684718454 5.828824634359722e-08 7.234419010639648 -0.04850351168469491 LGGPKET(ph)PPNGNLS(ph)PAPR ddPTM_KYSE-520_SHP099_60min_R1 2 LGGPKETPPNGNLSPAPR 18 1 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 2 LGGPKET(1)PPNGNLS(1)PAPR;LGGPKET(1)PPNGNLS(1)PAPR 65.854 0.016926 548300000.0 919930.0 1217370.0 980630.0 899530.0 1034590.0 814900.0 909560.0 986030.0 1517550.0 842370.0 True False 868899.6490650107 1158885.717890376 1043842.9788634765 985021.0607464433 1116006.3469881362 809813.9068281942 1001507.2012501609 982609.6920711319 1242001.174322351 834907.2571539421 1.040713973462086 1.3880412560322228 1.250250216319548 1.1797969802109685 1.3366830117064898 0.9699447452268088 1.1995430542359038 1.1769087927450559 1.4875917818179272 1.0 19.67125642402931 LGGSLADSYLDEGFLLDKK ddPTM_KYSE-520_SHP099_60min_R1 1 LGGSLADSYLDEGFLLDKK 19 1 P78371-2;P78371;F8VQ14;F5GWF6 P78371-2 CCT2 T-complex protein 1 subunit beta 0 220.34 2.2844999999999997e-18 395570000.0 393200.0 297330.0 172970.0 217590.0 303680.0 317270.0 227240.0 220330.0 224500.0 196940.0 False True 371388.41217523295 283045.8204985715 184119.92296178508 238269.68817918113 327577.8882971584 315289.80024466943 250211.63684868117 219565.72665540833 183736.4591844537 195195.26481700136 1.9026507252797114 1.4500649939635135 0.9432601919641873 1.220673505592273 1.67820612146646 1.6152533235898863 1.2818530054161843 1.1248517061172292 0.9412956782364036 1.0 17.574558529858667 -7.263559159286576 2.3442364079357416 0.9874408342148868 1.4407206903220406 0.3955863159363243 0.24693534669302697 0.38012187849080536 3.997492494622229 0.1817852173956915 0.0775418820291337 5.4505564353821145e-08 7.263559159286576 0.4532798561071538 LGGSVLGQIPFLQNCEDEDS(ph)DEDDELDSVQHKK ddPTM_KYSE-520_SHP099_60min_R1 2 LGGSVLGQIPFLQNCEDEDSDEDDELDSVQHKK 33 1 F5GYK2;Q9NRL3-2;Q9NRL3;Q9NRL3-3;R4GN16 F5GYK2 STRN4 Striatin-4 1 LGGSVLGQIPFLQNCEDEDS(1)DEDDELDSVQHKK;LGGSVLGQIPFLQNCEDEDS(1)DEDDELDSVQHKK 309.66 2.2819e-67 2740700000.0 1506920.0 1726490.0 1601510.0 1930730.0 1604790.0 1506830.0 1096360.0 1258630.0 2209100.0 1131510.0 True False 1423328.1436294548 1643546.8288856777 1704745.897106599 2114225.998704857 1731077.8429939316 1497425.315039792 1207190.7682424744 1254264.1062964508 1807983.1268791836 1121485.7017014585 1.2691451540309937 1.4655085003689086 1.5200781378846375 1.885201028864894 1.5435576578173331 1.3352156989322093 1.0764210068937916 1.1183950935741294 1.612132124498964 1.0 20.09697979633249 -6.403087601981488 3.6759016823990223 1.211092365820388 1.550472579581566 0.36463971510965465 0.20816603766087077 0.2821911102884136 6.852004456327163 0.0802499179124949 0.06913278798205741 3.9528687830789446e-07 6.403087601981488 0.3393802137611779 LGHDPYR ddPTM_KYSE-520_SHP099_60min_R1 4 LGHDPYR 7 0 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-6 P18583-10 SON Protein SON 0 ;;; 101.64 0.0081911 1702060000.0 1790840.0 1674880.0 1173120.0 1000090.0 1555120.0 1675920.0 1241130.0 1291280.0 1403660.0 1361400.0 False True 1691498.5352489685 1594416.2507538642 1248741.1922583668 1095138.252911976 1677499.0965775729 1665459.9616290429 1366595.53266152 1286800.8510670185 1148790.7273890902 1349339.055153174 1.2535756145122126 1.1816275862354473 0.9254465639969284 0.8116108762505643 1.2432005804405823 1.2342783344694515 1.0127888372032534 0.9536527132692706 0.8513729169861477 1.0 20.363821476340483 -7.096601977628213 3.6585226832516478 0.9280419607954108 1.0974134074582487 0.2324036716792406 0.13988182886850886 0.42085663391416483 10.31371260028524 0.07815241172001024 0.04331952219286212 8.00567623416506e-08 7.096601977628213 0.16937144666283788 LGHEEQQKR ddPTM_KYSE-520_SHP099_60min_R1 4 LGHEEQQKR 9 1 Q14257;Q14257-2;H0YL43 Q14257 RCN2 Reticulocalbin-2 0 ;;; 150.08 0.00055618 2323970000.0 3477990.0 3242800.0 1919450.0 1576280.0 3446050.0 3151180.0 2028930.0 2397820.0 2676710.0 2308860.0 False True 3285058.961498829 3087011.020457962 2043180.8182285863 1726089.1772741352 3717234.5296576107 3131512.316749127 2234034.0448485916 2389502.522075396 2190686.9383680127 2288405.296665901 1.4355232293357325 1.3489791449773307 0.8928404514730869 0.7542759928885701 1.624377698772786 1.3684255674952306 0.976240549741549 1.0441780245644376 0.9572984914690333 1.0 21.1259111580259 -4.603360451498501 7.427040213701989 1.094017041279118 1.4142091031036015 0.22282602938785123 0.2360012714982251 0.3399804637413889 26.010674300796772 0.06498496185279784 0.1742647958109481 2.4925251465046763e-05 4.603360451498501 0.32019206182448356 LGHPEALSAGT(ph)GSPQPPSFTYAQQR ddPTM_KYSE-520_SHP099_60min_R1 1 LGHPEALSAGTGSPQPPSFTYAQQR 25 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 LGHPEALS(0.029)AGT(0.549)GS(0.422)PQPPSFTYAQQR 68.55199999999999 0.024189 758180000.0 228820.0 253780.0 249030.0 293120.0 212710.0 235430.0 205720.0 220350.0 296540.0 238720.0 True False 216126.89845863884 241588.02786845388 265082.8722620883 320978.0366702587 229449.06684565535 233960.59404167568 226516.18523372058 219585.6572800765 242695.8111650688 236605.12652134942 0.9134497702404484 1.0210599889375382 1.1203598001422395 1.3565979798890626 0.9697552636288785 0.9888230127615806 0.9573595828798811 0.9280680453061222 1.025741980882945 1.0 17.852121807314862 LGHPEALSAGTGS(ph)PQPPSFTYAQQR ddPTM_KYSE-520_SHP099_60min_R1 4 LGHPEALSAGTGSPQPPSFTYAQQR 25 0 Q15942;Q15942-2;H0Y2Y8;H7C3D3 Q15942 ZYX Zyxin 1 LGHPEALSAGT(0.009)GS(0.991)PQPPSFTYAQQR;LGHPEALSAGT(0.004)GS(0.996)PQPPSFTYAQQR;LGHPEALSAGTGS(1)PQPPSFTYAQQR;LGHPEALSAGT(0.001)GS(0.999)PQPPSFTYAQQR 343.13 4.3124999999999996e-73 15598600000.0 3106650.0 3246080.0 3446150.0 3354140.0 2639780.0 3249260.0 2559050.0 2352760.0 3594640.0 3296540.0 True False 2934317.9315467593 3090133.4443345843 3668294.343034954 3672916.4571410343 2847515.667706375 3228980.163088197 2817743.7479212172 2344598.8246983127 2941943.9895002446 3267335.220269311 0.8980767915527496 0.9457656579479711 1.1227174733336953 1.124132116703438 0.8715101070871043 0.988261058448128 0.862398118944454 0.7175874731656883 0.9004108214086933 1.0 21.639683048529342 -6.462029727967177 1.5974159471290095 0.8491451745912605 1.0120750877026605 0.2332707477250371 0.1023636569787526 0.4873626294883022 2.4987659175330323 0.050679193478380034 0.03944488207597785 3.4512011465025523e-07 6.462029727967177 0.16292991311140004 LGHVVMGNNAVS(ph)PYQQVIEK ddPTM_KYSE-520_SHP099_60min_R1 4 LGHVVMGNNAVSPYQQVIEK 20 0 P60228;E5RGA2;H0YAW4 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E 1 LGHVVMGNNAVS(0.999)PY(0.001)QQVIEK;LGHVVMGNNAVS(1)PYQQVIEK;LGHVVMGNNAVS(1)PYQQVIEK;LGHVVMGNNAVS(1)PYQQVIEK 277.91 3.5376e-36 2657320000.0 1563170.0 1570790.0 1419330.0 1123820.0 1187550.0 1414060.0 1187310.0 1317110.0 1709300.0 1349520.0 True False 1476457.8439978613 1495326.89059614 1510822.2828082922 1230627.5149111962 1281003.428764786 1405234.3270210745 1307334.8818289351 1312541.252825785 1398934.2079464896 1337564.3027106735 1.1038406460203145 1.1179476661912617 1.1295324492037493 0.9200511051448054 0.957713529113133 1.050591978399291 0.9773996503790687 0.9812920770730966 1.0458818354463 1.0 20.351176819321587 -5.244290180110879 24.911506027422966 0.9902411563910778 1.1171910116806998 0.7156157659275597 0.0365980088625031 429.1707036693741 623426.9650358508 0.010227372810547143 0.017655048310853804 5.697834360580004e-06 5.244290180110879 0.126949855289622 LGIAVIHGEAQDAES(ph)DLVDGRHSPPMVR ddPTM_KYSE-520_SHP099_60min_R1 1 LGIAVIHGEAQDAESDLVDGRHSPPMVR 28 1 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 LGIAVIHGEAQDAES(0.702)DLVDGRHS(0.298)PPMVR 184.43 2.6395e-15 1476700000.0 412470.0 396350.0 527590.0 383060.0 372160.0 380020.0 374870.0 369220.0 480660.0 326730.0 True False 389589.4668614403 377308.75106652064 561599.2955738466 419465.90722881164 401446.87469925755 377648.154218738 412765.5179786349 367939.2619965958 393384.2604525598 323835.42639209336 1.2030477060583646 1.165124999664746 1.7342120404512924 1.2953058036366003 1.2396632424433818 1.166173072619576 1.2746150801884992 1.1361921272662194 1.2147659841769693 1.0 18.30490129418629 -5.7898030166825585 3.1327315732922005 1.1780251818906975 1.3677270871207228 0.2411698792148802 0.15820945279948082 0.39289271353673255 7.9381614522956445 0.05212356048688882 0.06373256892333876 1.6225458699937253e-06 5.7898030166825585 0.18970190523002528 LGIAVIHGEAQDAESDLVDGRHS(ph)PPMVR ddPTM_KYSE-520_SHP099_60min_R1 43 LGIAVIHGEAQDAESDLVDGRHSPPMVR 28 1 C9K0K7;I3L0S1;E7EPA1;O60256-4;O60256-3;O60256-2;O60256 C9K0K7 PRPSAP2 Phosphoribosyl pyrophosphate synthase-associated protein 2 1 LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.003)DLVDGRHS(0.997)PPMVR;LGIAVIHGEAQDAES(0.003)DLVDGRHS(0.997)PPMVR;LGIAVIHGEAQDAES(0.039)DLVDGRHS(0.961)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.196)DLVDGRHS(0.804)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.074)DLVDGRHS(0.926)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR;LGIAVIHGEAQDAES(0.002)DLVDGRHS(0.998)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.002)DLVDGRHS(0.998)PPMVR;LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR;LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR;LGIAVIHGEAQDAES(0.001)DLVDGRHS(0.999)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.008)DLVDGRHS(0.992)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAESDLVDGRHS(1)PPMVR;LGIAVIHGEAQDAES(0.142)DLVDGRHS(0.858)PPMVR 288.07 3.2824e-52 232791373000.0 31804014.0 32833878.5 31288704.0 32659538.0 29195922.7 27401072.4 27065669.7 28494048.3 35054816.0 25415972.6 True False 30039781.943689946 31256489.692203607 33305623.92353647 35763490.672071874 31493475.714413404 27230052.14323988 29801731.728757076 28395209.097008184 28689745.07439884 25190806.85609145 1.1924898680419183 1.2407895416277783 1.322134067154056 1.419704056181266 1.2501971808337649 1.0809519638969134 1.1830399835545817 1.1272052244782254 1.138897425489224 1.0 24.586393996233653 -6.134269325680765 4.844504177015113 1.119485578828928 1.296452529828856 0.6143241252770854 0.07100401621955127 0.17173822943916536 6.045183775355079 0.02473543782975544 0.024836865456903796 7.340585040462393e-07 6.134269325680765 0.1769669509999281 LGIHEDSQNR ddPTM_KYSE-520_SHP099_60min_R1 4 LGIHEDSQNR 10 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;;; 196.52 3.5274e-06 2741840000.0 1193490.0 1568630.0 1074160.0 1435700.0 1362840.0 1330610.0 925890.0 1097610.0 1244920.0 1070000.0 False True 1127284.7305366688 1493270.660238367 1143402.0723167665 1572148.4963410536 1470087.7545011172 1322305.169425283 1019487.9970156024 1093802.6470940986 1018873.9098793332 1060520.6324474039 1.062954077503604 1.4080543221420307 1.078151652437062 1.482430844096778 1.386194393133625 1.246845303116592 0.9613089701639195 1.0313827130075617 0.9607299270812291 1.0 20.01634125812286 -6.707626507559384 5.222285938320178 0.9905073416060507 1.291730313812019 0.554475052206582 0.12692802891521407 0.14563561585162357 8.328754599514161 0.049142682841607 0.03692564105335158 1.9605300008398442e-07 6.707626507559384 0.3012229722059684 LGIHEDSQNRK ddPTM_KYSE-520_SHP099_60min_R1 6 LGIHEDSQNRK 11 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;;;;; 184.24 2.2038e-06 6933980000.0 9092790.0 12007800.0 7646400.0 12611500.0 10480150.0 9994880.0 7567540.0 8427570.0 9499410.0 7732330.0 False True 8588394.812672522 11430927.263924737 8139299.178672567 13810093.168214269 11304878.181103352 9932498.246507507 8332540.795273132 8398336.726679618 7774556.604638709 7663827.571861719 1.1206404022195666 1.491542855934571 1.0620410104941003 1.8019838049226207 1.4750955805177568 1.2960231885925215 1.0872557761955188 1.0958410334693203 1.014448267753771 1.0 22.869633671627597 -6.695036559167655 2.9046080161846537 1.0489813151064835 1.399918774248276 0.41093476249149685 0.19352855944268155 0.2710908447285543 4.640440820953803 0.08465469816715195 0.060208292608945294 2.018196463552485e-07 6.695036559167655 0.3509374591417924 LGIHEDSTNR ddPTM_KYSE-520_SHP099_60min_R1 8 LGIHEDSTNR 10 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;;;;;;; 192.91 4.661e-06 6698570000.0 4257940.0 5314020.0 3682380.0 4952720.0 4731780.0 4847630.0 3608480.0 4320950.0 4510100.0 4058270.0 False True 4021743.5802070466 5058726.502693369 3919752.106816323 5423425.019710435 5104144.165854614 4817374.143032959 3973260.3737710244 4305961.632967308 3691179.5303688436 4022316.885086285 0.9998574689922208 1.2576648352718862 0.9745010696073585 1.3483336034063098 1.2689562537400936 1.1976615171456384 0.9878039168179042 1.0705177528236784 0.9176749708743204 1.0 21.93959531345719 -6.762245351301648 24.994469058491564 0.9998756094124234 1.1813809229269125 0.3756192221090273 0.11369695551863924 23.789790289524 737714.360797119 0.04537874706134799 0.03262221702494158 1.7288393888614196e-07 6.762245351301648 0.18150531351448917 LGIHEDSTNRR ddPTM_KYSE-520_SHP099_60min_R1 9 LGIHEDSTNRR 11 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;;;;;;;; 160.18 4.3457e-05 8983195000.0 6844091.0 9089203.0 6448557.0 9052724.0 7507279.0 7066599.0 5401193.0 5769446.0 6584719.0 5269992.0 False True 6464435.628872835 8652544.04470816 6864241.30227601 9913092.16715929 8098059.146725504 7022493.73441919 5947198.299003865 5749433.138424812 5389100.016857894 5223303.970871732 1.2376142887571537 1.6565269976551094 1.314156966654655 1.897858562787198 1.5503710279710174 1.3444543479722446 1.1385893549693835 1.1007272734818978 1.0317416039561818 1.0 22.316531233307867 -6.644289112650487 2.132667067402832 1.0576269805253022 1.5448294609223936 0.6214539760118845 0.1711294504563054 0.21022031137794447 1.950139874705028 0.07887051841202367 0.05569450316772217 2.2683542909958696e-07 6.644289112650487 0.48720248039709135 LGIYDADGDGDFDVDDAK ddPTM_KYSE-520_SHP099_60min_R1 1 LGIYDADGDGDFDVDDAK 18 0 E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2;Q12797;E5RHK2;G3XAN5;E5RG29;Q12797-4;Q12797-3;Q12797-9;Q12797-5;Q12797-8;Q12797-10 E5RHJ2 ASPH Aspartyl/asparaginyl beta-hydroxylase 0 150.22 0.00013752 0.0 86873.0 131350.0 263910.0 67961.0 120140.0 156340.0 107350.0 98047.0 229310.0 174210.0 False True 82053.981512968 125039.74883963057 280922.06087092985 74419.99300678034 129594.3344969065 155364.22406862144 118201.98563503734 97706.89784134184 187673.08443468646 172666.6349333292 0.47521619648550545 0.724168562663606 1.626962041505012 0.43100389971412667 0.7505464767234622 0.8997929688536026 0.6845676101852453 0.5658701687159703 1.0869099551696924 1.0 17.397629806483472 -4.517434830736579 24.99502407818763 0.8606623261450725 0.5374540936592178 0.13318759245870904 0.31270858999518775 442.06493679541285 2029661.1774072237 0.07931620056021939 0.22507247433816413 3.0378419095419155e-05 4.517434830736579 -0.32320823248585473 LGLAVIHGEAQCTELDMDDGRHS(ph)PPMVK ddPTM_KYSE-520_SHP099_60min_R1 50 LGLAVIHGEAQCTELDMDDGRHSPPMVK 28 1 C9JUN4;C9J168;B4DP31;Q14558;Q14558-2 C9JUN4 PRPSAP1 Phosphoribosyl pyrophosphate synthase-associated protein 1 1 LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.003)ELDMDDGRHS(0.997)PPMVK;LGLAVIHGEAQCT(0.004)ELDMDDGRHS(0.996)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.005)ELDMDDGRHS(0.995)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.001)ELDMDDGRHS(0.999)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.006)ELDMDDGRHS(0.994)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.025)ELDMDDGRHS(0.975)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.001)ELDMDDGRHS(0.999)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.001)ELDMDDGRHS(0.999)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.005)ELDMDDGRHS(0.995)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.039)ELDMDDGRHS(0.961)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCT(0.008)ELDMDDGRHS(0.992)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK;LGLAVIHGEAQCTELDMDDGRHS(1)PPMVK 285.63 3.615e-52 74358957000.0 17332242.0 18333318.0 17676302.0 16877130.0 16246471.0 15124738.0 15397362.0 16729583.0 19853536.0 13584166.0 True False 16370787.985292152 17452557.88440865 18815744.710003164 18481127.360905837 17524975.837924846 15030338.899905305 16953877.614731904 16671551.981287017 16248634.329314405 13463820.857561218 1.2159095221545817 1.2962559491132397 1.3975040895940272 1.3726510146283568 1.3016346565605783 1.1163501846108075 1.2592174089430703 1.2382482029181452 1.2068367888443234 1.0 23.68258455038691 -6.125292672093986 6.086314364489268 1.185463854147542 1.325726371149864 0.45114485419627315 0.08259938071244433 0.24746301579280428 11.257643663898154 0.02736870510058555 0.02744837568822465 7.493890240663812e-07 6.125292672093986 0.14026251700232195 LGLGIDEDDPTADDTSAAVTEEMPPLEGDDDTSR ddPTM_KYSE-520_SHP099_60min_R1 2 LGLGIDEDDPTADDTSAAVTEEMPPLEGDDDTSR 34 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ; 146.1 1.8912e-06 313890000.0 137247.0 134317.0 824940.0 74925.0 204560.0 180252.0 138535.0 120430.0 439730.0 204003.0 False True 129633.63531488857 127864.20970607271 878116.9523506685 82045.84947297741 220657.70821281214 179126.9804069155 152539.46977130804 120012.25643857318 359886.11669122416 202195.69213193248 0.6411295609122214 0.6323785059804412 4.342906335401538 0.40577446832765646 1.091307662820201 0.8859089850936851 0.7544150330946526 0.5935450709813606 1.7798901296888108 1.0 17.62539273475339 LGLHS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 LGLHSLR 7 0 P61204-2;P84077;P61204;H0YGG7 P61204-2 ARF3;ARF1 ADP-ribosylation factor 3;ADP-ribosylation factor 1 1 LGLHS(1)LR 101.9 0.004776600000000001 248830000.0 255000.0 274720.0 242740.0 229230.0 259390.0 251750.0 223780.0 249580.0 267130.0 255940.0 True False 240854.6416701025 261522.0388368731 258387.40879773197 251015.95027948756 279802.5172727867 250178.73486807893 246401.86628233496 248714.26523241017 218625.9257993015 253672.57071830722 0.9494705753487297 1.0309433065480398 1.0185863141059124 0.98952736422666 1.1030065902690587 0.9862269860697392 0.9713382317395045 0.980453915565814 0.8618429859414184 1.0 17.95260800555315 -6.987804022292962 1.7870952705327885 0.9389577223734081 1.0176532894256693 0.2737618171899733 0.04960141574744671 0.45328174543253336 2.8502888719018182 0.029991073643296826 0.015254404620216808 1.0284803006615241e-07 6.987804022292962 0.07869556705226122 LGLLGALMAEDGVRGS(ph)PPVPSGPPMEEDGLR ddPTM_KYSE-520_SHP099_60min_R1 4 LGLLGALMAEDGVRGSPPVPSGPPMEEDGLR 31 1 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 LGLLGALMAEDGVRGS(0.943)PPVPS(0.057)GPPMEEDGLR;LGLLGALMAEDGVRGS(0.997)PPVPS(0.003)GPPMEEDGLR;LGLLGALMAEDGVRGS(0.997)PPVPS(0.003)GPPMEEDGLR;LGLLGALMAEDGVRGS(1)PPVPSGPPMEEDGLR 137.47 1.5369e-06 435630000.0 253930.0 310430.0 235065.0 178783.0 214757.0 273395.0 164369.0 239557.0 345716.0 241196.0 True False 239843.996703095 295516.47683507024 250217.66601729818 195774.4825669312 231657.15409981838 271688.64039427415 180985.02260685095 238726.03268002428 282942.6891911472 239059.19108764865 1.0032828924580381 1.2361644640833829 1.0466766196224533 0.8189372752255003 0.969036802332706 1.1364910889147208 0.7570720112597328 0.9986063769139827 1.183567500182033 1.0 17.867008348357793 -4.998722811328369 24.998765521314667 0.973767434033384 1.125147926742793 0.15376096898023128 0.13035628007990915 71.33976691861125 1396224.7698164913 0.03392554151283176 0.06975854888418431 1.0029451640953355e-05 4.998722811328369 0.15138049270940912 LGLPKPEGEPLSLPT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 LGLPKPEGEPLSLPTPR 17 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LGLPKPEGEPLSLPT(1)PR 128.41 0.00014040000000000002 67216000.0 99041.0 92006.0 86354.0 71208.0 71881.0 80111.0 71409.0 83734.0 101090.0 105930.0 True False 93546.99829666142 87585.8936561784 91920.5170112853 77975.58691053418 77537.62575305597 79610.99753333343 78627.71860467993 83443.54629766259 82734.60427152092 104991.54261229304 0.890995559919589 0.8342185615808194 0.8755040141730682 0.7426844579137019 0.7385130632796074 0.7582610518193501 0.7488957362502238 0.794764456464825 0.7880120837641056 1.0 16.679913593540384 -5.249336118046206 24.331938173351983 0.7814094520812677 0.8636373065041578 0.14262751454064948 0.07395353435612788 818.1133567008413 1644698.8634956495 0.018717979352392874 0.03209302862814294 5.632016026329962e-06 5.249336118046206 0.08222785442289016 LGLPLLTDCAQPS(ph)RPHGSPSR ddPTM_KYSE-520_SHP099_60min_R1 1 LGLPLLTDCAQPSRPHGSPSR 21 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 LGLPLLTDCAQPS(0.619)RPHGS(0.372)PS(0.009)R 166.49 2.6674999999999997e-09 1535500000.0 339040.0 421960.0 364730.0 497110.0 359450.0 345420.0 290570.0 302200.0 402960.0 345240.0 True False 320232.775340516 401688.40822512703 388241.07938863325 544355.1849384292 387736.67000926496 343264.1056529567 319943.651289919 301151.73873401055 329792.6217949552 342181.44219265546 0.9358566416942568 1.1739047145606682 1.1346058889133013 1.5908378357700228 1.13313178974493 1.003164004024776 0.9350116980037271 0.8800937210512302 0.9637945871105276 1.0 18.38440199352007 -6.258977184730415 3.4229825428461753 0.9417477754367231 1.215657807048215 0.3750757921284138 0.15468812240265625 0.2635446661694389 6.595695422927458 0.058409210370856245 0.05454729558837498 5.508366333518902e-07 6.258977184730415 0.27391003161149186 LGLPLLTDCAQPSRPHGS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 7 LGLPLLTDCAQPSRPHGSPSR 21 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 LGLPLLTDCAQPS(0.202)RPHGS(0.767)PS(0.031)R;LGLPLLTDCAQPS(0.039)RPHGS(0.746)PS(0.215)R;LGLPLLTDCAQPS(0.123)RPHGS(0.753)PS(0.123)R;LGLPLLTDCAQPS(0.002)RPHGS(0.996)PS(0.001)R;LGLPLLTDCAQPS(0.028)RPHGS(0.929)PS(0.043)R;LGLPLLTDCAQPS(0.013)RPHGS(0.941)PS(0.046)R;LGLPLLTDCAQPS(0.002)RPHGS(0.739)PS(0.259)R 159.76 3.8593e-09 11101620000.0 2170069.0 2424723.0 2353836.0 2975220.0 2162839.0 1992745.0 1936791.0 2049216.0 2585850.0 2105651.0 True False 2049690.9466446976 2308235.6674965746 2505568.0348307593 3257984.0142674902 2333042.124429455 1980307.539283774 2132580.7355386093 2042107.747986611 2116324.8239738056 2086996.570311691 0.9821247316849103 1.106008366440124 1.2005616446492555 1.5610873829950347 1.1178945656250012 0.9488791536384831 1.0218419933580007 0.978491185388783 1.0140528518730314 1.0 20.992996798955424 -6.002689587507892 24.99938985055488 0.9976056686465878 1.2209311260216638 0.361662175184454 0.13782605283659186 128.78394842758917 1197049.7441061412 0.04642351467669384 0.05172618110194159 9.938261330221187e-07 6.002689587507892 0.22332545737507592 LGLPPLT(ph)PEQQEALQK ddPTM_KYSE-520_SHP099_60min_R1 2 LGLPPLTPEQQEALQK 16 0 Q9UHX1;H0YEM1;A0A0J9YXX5;A0A0J9YVP6;A0A0J9YXJ8;E9PMU7;A0A0J9YYL3;A0A0J9YWM1;E9PQ56;A0A0J9YVR6;E9PN18;Q9UHX1-4;Q9UHX1-6;Q9UHX1-3;Q9UHX1-5;Q9UHX1-2;E9PL19 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 1 LGLPPLT(1)PEQQEALQK;LGLPPLT(1)PEQQEALQK 154.39 1.8446e-05 248260000.0 385800.0 521250.0 369530.0 283320.0 364230.0 521720.0 356230.0 407550.0 505770.0 502610.0 True False 364398.9049267667 496208.36758779903 393350.495068905 310246.64761673583 392892.8288147852 518463.7519577927 392241.2048697662 406136.30417288555 413934.9174241477 498157.2664246627 0.73149370587747 0.9960877839826543 0.7896110758195517 0.6227885620206145 0.7886923574047738 1.040763202510067 0.7873842886703843 0.8152772860020226 0.8309322082060764 1.0 18.926241742178792 LGLSTLGELK ddPTM_KYSE-520_SHP099_60min_R1 2 LGLSTLGELK 10 0 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;A0A087WZ51;A0A087WYR3;O43399-6 O43399 TPD52L2 Tumor protein D54 0 ; 166.07 0.00044307 696040000.0 466740.0 576530.0 347450.0 3619100.0 636390.0 395160.0 580940.0 512950.0 691300.0 438170.0 False True 440849.0017768768 548832.6334108268 369847.18293965585 3963058.17587791 686470.2724362109 392693.6598628405 639667.084628026 511170.69617343013 565777.3462548454 434288.154691102 1.0151071287920377 1.2637522517766973 0.8516170172836481 9.125411626059043 1.5806792449231768 0.9042237408988357 1.4729093522778782 1.1770311730860188 1.3027694634159854 1.0 18.72829307792754 -5.975697368025565 24.99923602476608 1.2058646413792993 3.0993184937304963 0.14137841661159223 2.220227535357234 492.55876154974567 506674.92785982485 0.7235910477200759 0.8204418332716484 1.0575541942097466e-06 5.975697368025565 1.893453852351197 LGLVLQPDAGGLFLSHES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 LGLVLQPDAGGLFLSHESPK 20 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 LGLVLQPDAGGLFLSHES(1)PK;LGLVLQPDAGGLFLSHES(1)PK 239.02 2.1086000000000002e-26 944870000.0 1074880.0 1271760.0 1118080.0 912410.0 1100070.0 1075940.0 877680.0 1161530.0 1448450.0 1028250.0 True False 1015254.2636798419 1210662.7406493234 1190153.225791253 999125.1720739312 1186639.2504578999 1069224.6593603212 966404.4597313429 1157500.923533139 1185447.992453106 1019140.5049663937 0.9961867463145526 1.187925251473785 1.1678009263604907 0.9803605756076563 1.1643529470914606 1.0491435225563712 0.94825439183502 1.1357618678607106 1.1631840621349814 1.0 19.95892153333473 -5.22603126683814 24.993758342841232 1.0675284742481674 1.1243663861387765 0.07546611171261608 0.08500572731907866 1656.618150545408 1169366.4047228459 0.023124270690127124 0.040049441415089364 5.942493743559672e-06 5.22603126683814 0.05683791189060905 LGMLS(ph)PEGTCK ddPTM_KYSE-520_SHP099_60min_R1 8 LGMLSPEGTCK 11 0 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 LGMLS(1)PEGTCK;LGMLS(1)PEGTCK;LGMLS(0.999)PEGT(0.001)CK;LGMLS(0.998)PEGT(0.002)CK;LGMLS(1)PEGTCK;LGMLS(0.999)PEGT(0.001)CK;LGMLS(0.998)PEGT(0.002)CK;LGMLS(0.998)PEGT(0.002)CK 153.49 4.3209e-05 17324000000.0 21275300.0 20781700.0 15459800.0 14307530.0 15341520.0 20183700.0 15579320.0 18128600.0 21183400.0 19321300.0 True False 20095116.697740912 19783315.938032355 16456363.44455458 15667313.349484246 16548810.342691718 20057726.041536614 17154229.705110848 18065716.117847063 17337028.55005772 19150128.31374395 1.0493463212629626 1.033064406353558 0.8593343697203288 0.8181309854848281 0.8641618516370316 1.0473938196613173 0.8957762279221568 0.9433731107107721 0.9053217955524101 1.0 24.190850723044896 -4.7030270990628615 8.524143238141475 0.9132574589343598 1.0425762655300532 0.3745920273951173 0.06424997704631892 0.30181019746258286 39.56586628214885 0.017154792370433578 0.045468610133471477 1.9814033865409582e-05 4.7030270990628615 0.1293188065956934 LGMT(ph)PIRK ddPTM_KYSE-520_SHP099_60min_R1 2 LGMTPIRK 8 1 A6NHR9;A0A2R8YCU7;J3KTK7 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 1 LGMT(1)PIRK;LGMT(1)PIRK 83.883 0.007719 1158680000.0 2023480.0 1895790.0 1700590.0 1454240.0 1530380.0 1885870.0 1423500.0 1701980.0 1972240.0 2047500.0 True False 1911233.530692625 1804713.4027611974 1810212.7524402034 1592450.5323667994 1650812.1993289157 1874099.585802045 1567401.2720212007 1696076.228625119 1614130.932124485 2029360.742930897 0.9417909247285098 0.8893014261006875 0.8920113187100536 0.7847054979820436 0.8134641438587877 0.923492578798673 0.7723620738605039 0.835768719057592 0.7953888621070309 1.0 20.952593913362723 -4.824407938311449 2.172611335302049 0.8388706527497385 0.9261523083974562 0.14233257606753447 0.06694146402812766 0.5342701407261283 4.91122107467982 0.01777782595115699 0.05808667910051819 1.4982768239132667e-05 4.824407938311449 0.08728165564771773 LGNDFHTNKR ddPTM_KYSE-520_SHP099_60min_R1 3 LGNDFHTNKR 10 1 H3BNC9;H0YN88;A0A075B716;P08708;H0YN73;A0A0J9YYC4 H3BNC9 RPS17 40S ribosomal protein S17 0 ;; 161.67 0.00014611 5054400000.0 7137400.0 6960000.0 4684490.0 4053950.0 6961300.0 6477800.0 4624740.0 5822700.0 5858800.0 5129030.0 False True 6741474.193945841 6625631.152827012 4986459.720849011 4439236.1891354835 7509114.705621078 6437369.647382091 5092253.852312834 5802502.412728393 4794989.608329075 5083590.78452496 1.326124481629731 1.3033368407614951 0.9808932174533742 0.8732481384318016 1.4771280820792447 1.2663036660972378 1.0017041237493476 1.1414180760559807 0.9432288733636034 1.0 22.27741647124502 -6.76981405066051 24.97813363316409 1.033372580929272 1.1961686184308717 0.21787853051642458 0.1687507645263862 365.6793736975261 1090656.6536857698 0.07535962726106582 0.05176175749039085 1.698970935244928e-07 6.76981405066051 0.16279603750159977 LGNPYCS(ph)PTLVR ddPTM_KYSE-520_SHP099_60min_R1 9 LGNPYCSPTLVR 12 0 Q6ZV89;Q6ZV89-2 Q6ZV89 SH2D5 SH2 domain-containing protein 5 1 LGNPY(0.013)CS(0.649)PT(0.337)LVR;LGNPYCS(0.959)PT(0.041)LVR;LGNPYCS(0.916)PT(0.084)LVR;LGNPYCS(0.5)PT(0.5)LVR;LGNPYCS(0.997)PT(0.003)LVR;LGNPYCS(0.5)PT(0.5)LVR;LGNPYCS(0.667)PT(0.332)LVR;LGNPYCS(0.898)PT(0.102)LVR;LGNPYCS(0.691)PT(0.309)LVR 181.88 3.2558e-07 44462740000.0 30942640.0 31710520.0 25396150.0 21788820.0 23909170.0 28929210.0 22652740.0 26608470.0 32082700.0 28011590.0 True False 29226190.076576386 30187099.020739082 27033226.4642767 23859622.90175237 25790685.65443152 28748652.069644403 24942700.028637514 26516171.428033587 26257290.41905157 27763429.10528724 1.0526866103514059 1.0872972105232592 0.9736991191454992 0.8593903444444682 0.9289445319101438 1.03548635727312 0.8984012721932627 0.9550755177783091 0.9457509848468667 1.0 24.726682432691998 -4.858438101135562 4.873565202510168 0.9434630197785707 1.0694284945597783 0.5185715239948778 0.04681311685893468 0.14937020634367346 5.839407112644525 0.012442716251100026 0.027542502281135653 1.3853576232776302e-05 4.858438101135562 0.12596547478120756 LGNPYCSPT(ph)LVR ddPTM_KYSE-520_SHP099_60min_R1 1 LGNPYCSPTLVR 12 0 Q6ZV89;Q6ZV89-2 Q6ZV89 SH2D5 SH2 domain-containing protein 5 1 LGNPYCS(0.083)PT(0.917)LVR 131.66 0.0024348000000000004 955450000.0 942740.0 946400.0 778640.0 621260.0 732630.0 850790.0 660800.0 779080.0 964330.0 865200.0 True False 890444.332894402 900933.5234246394 828832.3802680497 680304.3636113697 790283.8129055165 845479.904025473 727600.1127865191 776377.5533186394 789231.9807810441 857535.0011154144 1.0383766630355398 1.0506084559263185 0.9665289220731158 0.7933254767752722 0.9215761594309003 0.9859421515456966 0.8484786181789825 0.9053596090057995 0.9203495831126111 1.0 19.709836031908967 -4.947263465249974 4.725694055319925 0.9058141270542918 1.0410607355866577 0.46677822419982296 0.056585468975120234 0.16237324511950152 7.714472184057784 0.014906144139754352 0.0320150646841001 1.1291107305287515e-05 4.947263465249974 0.13524660853236592 LGNSGAS(ph)PSSAGK ddPTM_KYSE-520_SHP099_60min_R1 1 LGNSGASPSSAGK 13 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 LGNS(0.009)GAS(0.715)PS(0.221)S(0.055)AGK 80.411 0.014009 0.0 634210.0 627920.0 587730.0 698670.0 632290.0 643840.0 560300.0 729260.0 731190.0 706970.0 True False 599029.1070337086 597753.7806728644 625616.0162012494 765071.3867372049 682047.6257620194 639821.5557396779 616940.5920010378 726730.367270563 598424.3277999149 700706.7958143372 0.8548926749562029 0.8530726178817427 0.8928356624173741 1.0918566671642813 0.9733709303751896 0.9131088203534538 0.8804547004343675 1.0371390310636022 0.8540295761002957 1.0 19.418451362733542 -5.012784137972815 24.51296647696651 0.9630248084717166 0.8587254784109531 0.3175955517412441 0.06693340521526328 554.7412381255041 1063696.8207434241 0.017995093076177297 0.033277891302040855 9.709924700871582e-06 5.012784137972815 -0.10429933006076342 LGNSGASPS(ph)SAGK ddPTM_KYSE-520_SHP099_60min_R1 1 LGNSGASPSSAGK 13 0 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 LGNS(0.041)GAS(0.381)PS(0.487)S(0.091)AGK 68.751 0.055480999999999996 0.0 313030.0 325510.0 248460.0 328940.0 260460.0 295380.0 260550.0 320860.0 416040.0 323770.0 True False 295665.60189016594 309872.0109995289 264476.1291500558 360202.35870058293 280956.7201853199 293536.4238543526 286888.93672295293 319747.01154928724 340497.623514923 320901.6496892483 0.9213589340425011 0.9656292240928018 0.8241656887902157 1.122469638437173 0.875522829058031 0.9147239477846394 0.8940089183111639 0.9964018940348883 1.0610653570795003 1.0 18.291771680673484 -7.469126993615424 5.399800408251384 1.030604762783657 0.9332532130237913 0.23271765154574087 0.07483671447240034 0.28648248579203067 18.524013464181266 0.042694662962629935 0.019105655408546994 3.395259760583721e-08 7.469126993615424 -0.09735154975986571 LGPELSPSPT(ph)SPTATSTTPSR ddPTM_KYSE-520_SHP099_60min_R1 2 LGPELSPSPTSPTATSTTPSR 21 0 M0QY76;P26651 M0QY76 ZFP36 Tristetraprolin 1 LGPELSPS(0.018)PT(0.557)S(0.422)PT(0.003)ATSTTPSR;LGPELSPS(0.006)PT(0.571)S(0.422)PTATSTTPSR 197.09 1.0059e-12 493640000.0 279140.0 413350.0 270380.0 230650.0 259420.0 438360.0 301620.0 475500.0 541880.0 476240.0 True False 263655.5477482056 393492.04554900085 287809.1274232956 252570.90665254882 279834.87810211006 435624.0326386138 332110.6931275269 473850.6014825344 443488.2516831707 472020.88410911284 0.5585675478020983 0.8336327031200611 0.6097381220038673 0.5350841777461784 0.5928442734695254 0.9228914382905026 0.703593218665206 1.0038763483460587 0.9395521821459355 1.0 18.848491166087737 -6.859794687086486 1.0427986682868722 0.9908278273892218 0.636829571583493 0.6220606548174973 0.11085235413022737 0.3715813101210947 0.7803821352162321 0.08512343300523711 0.04442509307651282 1.3810369961681624e-07 6.859794687086486 -0.35399825580572886 LGPGRPLPTFPTS(ph)ECTSDVEPDTR ddPTM_KYSE-520_SHP099_60min_R1 2 LGPGRPLPTFPTSECTSDVEPDTR 24 1 Q8TDD1;H0YHZ9;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 LGPGRPLPT(0.001)FPT(0.093)S(0.817)ECT(0.053)S(0.036)DVEPDTR;LGPGRPLPTFPT(0.002)S(0.433)ECT(0.282)S(0.282)DVEPDTR 189.34 2.8524e-15 10354900000.0 1498380.0 1279640.0 1292540.0 1246930.0 1294260.0 1256570.0 1326710.0 1433850.0 1651860.0 1427530.0 True False 1415261.8744535227 1218164.1736212 1375859.1965371226 1365437.8522968255 1396110.8986679416 1248727.2805290257 1460826.7942418307 1428876.3090131057 1351923.8640019249 1414883.1948015345 1.0002676402217368 0.8609644796806508 0.9724189258818033 0.965053410284059 0.9867322643999414 0.8825656316486143 1.032471655334588 1.0098899430447572 0.955502100080819 1.0 20.43225152610133 -6.7827303299218835 24.99995683971383 1.0002900761172018 0.9449625229391705 0.26438151336989635 0.044770282819984394 337.61330890251605 396423.8526418631 0.018279819062382723 0.012337917176626799 1.6491861164842796e-07 6.7827303299218835 -0.055327553178031286 LGPGRPLPTFPTSECT(ph)SDVEPDTR ddPTM_KYSE-520_SHP099_60min_R1 4 LGPGRPLPTFPTSECTSDVEPDTR 24 1 Q8TDD1;H0YHZ9;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 LGPGRPLPTFPT(0.001)S(0.012)ECT(0.494)S(0.494)DVEPDTR;LGPGRPLPTFPT(0.01)S(0.071)ECT(0.513)S(0.406)DVEPDTR;LGPGRPLPTFPT(0.001)S(0.025)ECT(0.487)S(0.487)DVEPDTR;LGPGRPLPTFPT(0.001)S(0.007)ECT(0.59)S(0.403)DVEPDTR 153.06 1.0754000000000001e-06 5068400000.0 1899979.0 1696453.0 1487832.0 1456989.0 1730399.0 1611547.0 1595081.0 1756973.0 2052379.0 1808432.0 True False 1794583.3773557656 1614952.8514521325 1583740.0313353685 1595460.7965002842 1866571.556676484 1601488.7373999942 1756327.3539703886 1750878.4707435824 1679718.7098642783 1792410.699418805 1.001212154077001 0.9009948735386294 0.8835809961684012 0.8901201030643354 1.041374924442108 0.8934831386128648 0.979868818312613 0.9768288435855188 0.9371282543721328 1.0 20.773469812817645 -5.695370295205128 24.999999999996557 0.9668170971215352 0.9151642964845879 0.2226261933583008 0.047349448854492875 89.28879381740819 33784.865223469846 0.013673483672172056 0.017652386945645596 2.0166461648721153e-06 5.695370295205128 -0.05165280063694733 LGPGRPLPTFPTSECTS(ph)DVEPDTR ddPTM_KYSE-520_SHP099_60min_R1 8 LGPGRPLPTFPTSECTSDVEPDTR 24 1 Q8TDD1;H0YHZ9;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 LGPGRPLPT(0.001)FPT(0.009)S(0.029)ECT(0.369)S(0.592)DVEPDTR;LGPGRPLPTFPT(0.005)S(0.005)ECT(0.163)S(0.827)DVEPDTR;LGPGRPLPT(0.001)FPT(0.008)S(0.037)ECT(0.169)S(0.785)DVEPDTR;LGPGRPLPTFPTSECT(0.029)S(0.971)DVEPDTR;LGPGRPLPTFPTS(0.005)ECT(0.152)S(0.843)DVEPDTR;LGPGRPLPTFPTSECT(0.027)S(0.973)DVEPDTR;LGPGRPLPTFPTS(0.003)ECT(0.177)S(0.819)DVEPDTR;LGPGRPLPTFPT(0.002)S(0.029)ECT(0.215)S(0.754)DVEPDTR 208.86 4.7925e-21 56140160000.0 4486010.0 4283050.0 3957320.0 3650420.0 3954540.0 3718440.0 3662450.0 4211650.0 5054140.0 3860320.0 True False 4237162.082660777 4077285.849010884 4212415.179135869 3997354.8192612114 4265739.7997452775 3695231.8366747163 4032686.1880674716 4197040.769156501 4136435.580501181 3826120.5680835163 1.107430361187794 1.0656448944715757 1.1009624773131093 1.0447540134009592 1.1148994716290304 0.9657907457227984 1.0539882673084249 1.0969442009138715 1.0811043475749902 1.0 21.867450905693907 LGPQNFIDET(ph)SDIENLLK ddPTM_KYSE-520_SHP099_60min_R1 4 LGPQNFIDETSDIENLLK 18 0 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 LGPQNFIDET(0.5)S(0.5)DIENLLK;LGPQNFIDET(0.5)S(0.5)DIENLLK;LGPQNFIDET(0.657)S(0.343)DIENLLK;LGPQNFIDET(0.697)S(0.303)DIENLLK 123.03 8.222299999999999e-05 415603200.0 364704.0 311747.0 302021.0 290939.0 299466.0 328656.0 313861.0 362634.0 382628.0 357772.0 True False 344473.1421006001 296770.2061782128 321489.7569106862 318589.755086 323032.2704715388 326604.73599524715 345589.13286817423 361376.10729341186 313152.40046694485 354602.4184224045 0.9714348357609385 0.8369097072110161 0.9066203167507044 0.8984421383908725 0.9109702971251056 0.921044863281766 0.9745819963825131 1.0191022072019218 0.883108473597368 1.0 18.43584285002511 -6.628849646135394 3.290664750402776 0.9708971138755736 0.9016244799872895 0.3143266962396256 0.044855539409397696 0.28123950549943383 6.0290936024263955 0.01772081934710663 0.013244123521349852 2.3504464105884374e-07 6.628849646135394 -0.0692726338882842 LGPQNFIDET(ph)SDIENLLKEEEDYK ddPTM_KYSE-520_SHP099_60min_R1 1 LGPQNFIDETSDIENLLKEEEDYK 24 1 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 LGPQNFIDET(0.5)S(0.5)DIENLLKEEEDYK 85.0 0.013857 16632000.0 17988.0 18800.0 20392.0 15589.0 16508.0 14921.0 19273.0 16920.0 23558.0 15512.0 True False 16990.169781811004 17896.8197806247 21706.5009483536 17070.573872996236 17807.085682328405 14827.872504336076 21221.30292635376 16861.30846915768 19280.461048852387 15374.575748153384 1.1050821863394615 1.1640529191691198 1.4118438976087346 1.1103118650312387 1.1582163940014532 0.9644410842437086 1.3802854318697293 1.0967007314776063 1.2540483304827539 1.0 13.908258980279056 LGPQNFIDET(ph)SDIENLLKEEEDYKEENNDSK ddPTM_KYSE-520_SHP099_60min_R1 1 LGPQNFIDETSDIENLLKEEEDYKEENNDSK 31 2 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 LGPQNFIDET(0.561)S(0.439)DIENLLKEEEDYKEENNDSK 134.19 2.1329e-06 1529900000.0 44926.0 52860.0 52209.0 42641.0 46184.0 51917.0 46353.0 57138.0 62996.0 49075.0 True False 42433.86522223936 50320.5262555224 55574.475677353556 46693.58781951586 49818.41804898562 51592.966745366684 51038.813601685084 56939.80161410946 51557.51439992805 48640.23367977228 0.8724025772903733 1.0345453228455375 1.1425618561628124 0.9599786902120505 1.0242224241143665 1.0607055690775256 1.049312672667325 1.170631744678247 1.0599767003456844 1.0 15.56986253941316 -6.4826097570725505 1.9087296185951321 1.0853246516147677 1.0127437602251819 0.13345019239427514 0.07493679535296127 0.6860079519890612 4.99842438820039 0.03407603264091697 0.026681163593157163 3.291472590804589e-07 6.4826097570725505 -0.07258089138958579 LGPQNFIDET(ph)SDIENLLKEEEDYKEENNDSKETSGALK ddPTM_KYSE-520_SHP099_60min_R1 2 LGPQNFIDETSDIENLLKEEEDYKEENNDSKETSGALK 38 3 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 LGPQNFIDET(0.5)S(0.5)DIENLLKEEEDYKEENNDSKETSGALK;LGPQNFIDET(0.448)S(0.448)DIENLLKEEEDY(0.094)KEENNDS(0.004)KET(0.005)S(0.001)GALK 150.6 2.9785e-07 1317610000.0 1127753.0 1320292.0 1285663.0 1074142.0 998881.0 918271.0 741840.0 936323.0 1736960.0 869178.0 True False 1065194.2929701307 1256863.1905213057 1368538.8941135306 1176228.1327274307 1077487.251844554 912539.7300736667 816832.4268606998 933075.1140524312 1421571.8491983467 861477.759130251 1.2364733525396547 1.4589618561833055 1.5885945743918093 1.3653609977290093 1.2507429709298432 1.0592725353640793 0.9481758736120766 1.0831099284495342 1.6501550204076858 1.0 19.716454025145094 -5.832831134572795 2.8364544882615217 1.1423583822432628 1.4344647378183406 0.28210835416101465 0.1983027359046861 0.3417869902964817 5.585740556207162 0.06679184194404757 0.08015569383362393 1.4694975469195176e-06 5.832831134572795 0.2921063555750778 LGPQNFIDETS(ph)DIENLLK ddPTM_KYSE-520_SHP099_60min_R1 6 LGPQNFIDETSDIENLLK 18 0 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 LGPQNFIDET(0.137)S(0.863)DIENLLK;LGPQNFIDET(0.252)S(0.748)DIENLLK;LGPQNFIDET(0.15)S(0.85)DIENLLK;LGPQNFIDET(0.149)S(0.851)DIENLLK;LGPQNFIDET(0.012)S(0.988)DIENLLK;LGPQNFIDET(0.151)S(0.849)DIENLLK 267.39 6.0220000000000004e-30 1636567000.0 1056206.0 974471.0 909697.0 878393.0 903561.0 959019.0 936433.0 1103769.0 1167750.0 1055558.0 True False 997616.1476855392 927655.950449209 968337.5241866643 961875.2066215135 974666.1101411647 953033.4066909655 1031096.7863453662 1099940.2829606202 955716.0365819421 1046206.5773316975 0.9535556067998674 0.8866852594400175 0.9255700978829299 0.9193931939089245 0.9316191766132904 0.9109418993729079 0.9855575454086055 1.0513605121523593 0.9135060486997248 1.0 19.996736314471832 -6.792397730733789 7.2195227596885365 0.9923260857059607 0.920280431507968 0.4602911217520391 0.035033518359039756 0.15678735653551237 26.669247368877567 0.013723583914568276 0.009399004268161974 1.6128807897384887e-07 6.792397730733789 -0.07204565419799269 LGPQNFIDETS(ph)DIENLLKEEEDYKEENNDSK ddPTM_KYSE-520_SHP099_60min_R1 4 LGPQNFIDETSDIENLLKEEEDYKEENNDSK 31 2 Q14692 Q14692 BMS1 Ribosome biogenesis protein BMS1 homolog 1 LGPQNFIDET(0.033)S(0.967)DIENLLKEEEDYKEENNDSK;LGPQNFIDET(0.017)S(0.983)DIENLLKEEEDYKEENNDSK;LGPQNFIDET(0.033)S(0.967)DIENLLKEEEDYKEENNDSK;LGPQNFIDET(0.15)S(0.85)DIENLLKEEEDYKEENNDSK 418.62 2.803699999999999e-125 5248240000.0 1047120.0 996193.0 971558.0 987433.0 991407.0 937780.0 954132.0 1044874.0 1340474.0 977380.0 True False 989034.1662180312 948334.3929638228 1034186.1832277634 1081278.3354374443 1069425.0905657958 931926.9671681722 1050584.97399096 1041249.575969426 1097077.7121996507 968721.173590134 1.0209688744105965 0.9789549550664236 1.067578795036566 1.116191495464239 1.103955523757623 0.9620177534825626 1.084507082773296 1.0748702561238521 1.13250101485221 1.0 19.88572194981446 -4.774396673296472 23.483308664694853 1.070228881529528 0.9999619353155575 0.22660146937567083 0.049884496330185324 137.60839917790764 249399.10561900106 0.013186733576968536 0.0277778301854442 1.6811378519737644e-05 4.774396673296472 -0.07026694621397045 LGS(ph)AEQSSPDLSFLVVK ddPTM_KYSE-520_SHP099_60min_R1 4 LGSAEQSSPDLSFLVVK 17 0 A0A5S6SZ32;Q96LW4-2;Q96LW4 A0A5S6SZ32 PRIMPOL DNA-directed primase/polymerase protein 1 LGS(1)AEQSSPDLSFLVVK;LGS(1)AEQSSPDLSFLVVK;LGS(0.999)AEQS(0.001)SPDLSFLVVK;LGS(1)AEQSSPDLSFLVVK 229.96 6.963600000000001e-19 235820000.0 324209.0 355282.0 290447.0 279418.0 292189.0 366583.0 261321.0 395112.0 463469.0 439466.0 True False 306224.48047538125 338213.719430846 309169.678351631 305973.8027099153 315182.61197200505 364295.01951994025 287737.87692718767 393741.4486918341 379314.7127027155 435572.67313937476 0.7030387794263562 0.7764805743968796 0.7098004475884618 0.7024632663583321 0.7236051097979527 0.8363587570687038 0.6605967147877461 0.9039626977834868 0.8708413913315957 1.0 18.73255391985302 -7.694373499089887 1.0851641418408073 0.9938689681918664 0.7298589010367097 0.7131854142937943 0.055848623921152654 0.24064791151017936 0.5676224729775312 0.04948605753939765 0.016859554557057073 2.021280102923512e-08 7.694373499089887 -0.26401006715515674 LGS(ph)ALLIR ddPTM_KYSE-520_SHP099_60min_R1 12 LGSALLIR 8 0 Q14993 Q14993 COL19A1 Collagen alpha-1(XIX) chain 1 LGS(1)ALLIR;LGS(1)ALLIR;LGS(1)ALLIR;LGS(1)ALLIR;LGS(1)ALLIR;LGS(1)ALLIR;LGS(1)ALLIR;LGS(1)ALLIR;LGS(1)ALLIR;LGS(1)ALLIR;LGS(1)ALLIR;LGS(1)ALLIR 130.56 0.00080232 7513500000.0 9362203.0 8665703.0 6704905.0 6029237.0 6626028.0 8305431.0 6654237.0 7509673.0 8936758.0 7353814.0 True False 8842862.936501026 8249389.620394615 7137113.904527317 6602253.871723791 7147458.706657802 8253593.724385793 7326912.215054821 7483623.6971338475 7314068.024536034 7288664.929140721 1.2132349370522555 1.1318107912208768 0.97920729981598 0.9058248576261753 0.9806265998155074 1.1323875915035142 1.0052475022910141 1.0267482138208417 1.0034852878602978 1.0 22.797223148416876 -4.594741522579307 3.7290613790588405 1.0056874351958194 1.1997333453956225 0.6285434166006039 0.05329650843132872 0.14873273771949144 3.9774450532073 0.015284332490184908 0.050304263567475485 2.542485456885084e-05 4.594741522579307 0.1940459101998031 LGS(ph)FGK ddPTM_KYSE-520_SHP099_60min_R1 8 LGSFGK 6 0 Q6GQQ9-2;Q6GQQ9 Q6GQQ9-2 OTUD7B OTU domain-containing protein 7B 1 LGS(1)FGK;LGS(1)FGK;LGS(1)FGK;LGS(1)FGK;LGS(1)FGK;LGS(1)FGK;LGS(1)FGK;LGS(1)FGK 105.14 0.010506999999999999 13637800000.0 16946320.0 14095580.0 13631430.0 12983310.0 12955450.0 12773750.0 11927970.0 12044930.0 14209550.0 11829110.0 True False 16006273.84794861 13418407.178903086 14510133.78885917 14217239.878825512 13974970.208572894 12694024.288068028 13133765.613368973 12003148.949137783 11629453.913605602 11724313.288308311 1.3652205851502062 1.1444940824196632 1.2376105475899324 1.2126287936201083 1.191964924931593 1.0827094070171879 1.1202161943647644 1.0237826859426837 0.9919091743482065 1.0 23.483000088481788 -6.457204909819343 0.5418619479404264 0.9786529531874799 1.2720608671129126 0.785355317653062 0.052184626928363564 0.4166872936945653 0.26129858974952697 0.04554691620687263 0.0471064653495034 3.4897562214955806e-07 6.457204909819343 0.29340791392543264 LGS(ph)FGS(ph)ITR ddPTM_KYSE-520_SHP099_60min_R1 1 LGSFGSITR 9 0 Q14315;Q14315-2 Q14315 FLNC Filamin-C 2 LGS(1)FGS(0.996)IT(0.004)R 55.04 0.059401999999999996 151050000.0 408480.0 340900.0 368770.0 396410.0 380920.0 362170.0 360300.0 400660.0 429450.0 386510.0 True False 385820.8001153079 324522.6522986679 392541.5042528622 434084.68721498764 410896.23686167574 359909.5626898602 396722.6401891381 399270.20397474663 351472.70555351273 383085.8221002296 1.007139334993094 0.8471278068175558 1.0246829342333599 1.1331264749897605 1.0725957818250185 0.9395011298426345 1.03559729257049 1.04224740499606 0.9174777172034163 1.0 18.54730810744426 -4.82798499713611 15.22648548126688 1.0256869619176765 0.92714679426462 0.2279237167537851 0.06834910280732162 2.294290758665498 523.1841783988833 0.018099377655764273 0.03768334196193049 1.4859869753713273e-05 4.82798499713611 -0.09854016765305651 LGS(ph)FGSITR ddPTM_KYSE-520_SHP099_60min_R1 33 LGSFGSITR 9 0 Q14315;Q14315-2 Q14315 FLNC Filamin-C 1 LGS(0.998)FGS(0.002)ITR;LGS(0.999)FGS(0.001)ITR;LGS(0.998)FGS(0.002)ITR;LGS(0.999)FGS(0.001)ITR;LGS(0.984)FGS(0.016)ITR;LGS(1)FGSITR;LGS(0.999)FGS(0.001)ITR;LGS(0.997)FGS(0.003)ITR;LGS(0.866)FGS(0.133)ITR;LGS(0.978)FGS(0.022)ITR;LGS(0.95)FGS(0.049)IT(0.001)R;LGS(1)FGSITR;LGS(0.997)FGS(0.003)ITR;LGS(1)FGSITR;LGS(0.995)FGS(0.005)ITR;LGS(0.813)FGS(0.187)ITR;LGS(1)FGSITR;LGS(0.997)FGS(0.003)ITR;LGS(0.984)FGS(0.016)ITR;LGS(0.987)FGS(0.013)ITR;LGS(0.924)FGS(0.076)ITR;LGS(0.964)FGS(0.036)ITR;LGS(0.996)FGS(0.004)ITR;LGS(0.995)FGS(0.005)ITR;LGS(0.931)FGS(0.069)ITR;LGS(0.994)FGS(0.006)ITR;LGS(0.996)FGS(0.004)ITR;LGS(0.963)FGS(0.037)ITR;LGS(0.989)FGS(0.011)ITR;LGS(0.921)FGS(0.079)ITR;LGS(0.996)FGS(0.004)ITR;LGS(0.987)FGS(0.013)ITR;LGS(0.988)FGS(0.012)ITR 187.85 5.603500000000001e-06 430372021000.0 152424543.0 142329906.0 142902964.0 145506035.0 138946843.0 149418263.0 137060226.0 147572005.0 173184276.0 153860511.0 True False 143969249.74899653 135492163.67421573 152114717.71226662 159334884.81841522 149881169.04470748 148485688.19672665 150915611.22298086 147060112.15821978 141738377.0987223 152497426.57420638 0.9440765853116874 0.888488197591218 0.9974903913427449 1.044836548378616 0.9828439234138432 0.9736930749088569 0.9896272652807305 0.964344877561978 0.9294476653332334 1.0 27.184209656200938 -4.769633620525984 24.999862689787204 0.985792753094763 0.9162823875961035 0.4535975902124739 0.03028939057593815 146.97559276175758 448413.477085824 0.008381774481331561 0.017933417249498925 1.6996769291132635e-05 4.769633620525984 -0.06951036549865952 LGS(ph)IAEIDLGVPPPVMK ddPTM_KYSE-520_SHP099_60min_R1 1 LGSIAEIDLGVPPPVMK 17 0 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C0U8 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 1 LGS(1)IAEIDLGVPPPVMK 124.16 7.836199999999999e-05 25566000.0 120150.0 119230.0 99240.0 86467.0 92816.0 169610.0 131970.0 190800.0 196270.0 186520.0 True False 113485.03998691302 113502.01183212142 105637.16918961405 94684.79768274841 100120.0911492 168551.40107636503 145310.8155030825 190138.15933305476 160632.31556406582 184867.57791036423 0.6138720551742065 0.6139638605919019 0.5714207455070017 0.5121763305010559 0.5415773402827007 0.911741274384466 0.7860265014860452 1.0285100366557842 0.868904744573171 1.0 17.49613270139952 -6.264406446447248 24.828894838964224 0.9125052804077021 0.5698106556932236 0.8657718281879226 0.0685734983806568 84.35005266312912 705851.8307830386 0.023704994360205085 0.021811443006060614 5.439933034258237e-07 6.264406446447248 -0.3426946247144784 LGS(ph)LSAR ddPTM_KYSE-520_SHP099_60min_R1 5 LGSLSAR 7 0 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79;H0Y4T4;Q00G26 H0Y2V6 CEP170;PLIN5 Centrosomal protein of 170 kDa;Perilipin-5 1 LGS(0.995)LS(0.005)AR;LGS(0.995)LS(0.005)AR;LGS(0.999)LS(0.001)AR;LGS(0.999)LS(0.001)AR;LGS(0.989)LS(0.011)AR 165.72 0.00079929 3875710000.0 2798430.0 2661100.0 2832180.0 3031340.0 2702530.0 3260890.0 3188780.0 3588930.0 3935190.0 3769780.0 True False 2643195.5093680997 2533256.761607465 3014746.8544482244 3319437.6421943973 2915203.7357077184 3240537.5759442705 3511133.0018937592 3576480.8394925594 3220658.694067129 3736382.6820444586 0.7074209828854594 0.6779971371190833 0.8068624418306712 0.8884094389330809 0.7802208670211985 0.8672927405206595 0.9397145048249052 0.9572041045687524 0.8619723856296385 1.0 21.833210793433306 -2.4233924461075693 0.21482314170117067 0.9957777347010538 9.357108988172622e-15 0.7689986154489313 0.04820325858150178 13.297874925075638 0.28360456919226745 0.084536872257805 4.022204308997347 0.0037723115549039726 2.4233924461075693 -0.9957777347010445 LGS(ph)LVDEFK ddPTM_KYSE-520_SHP099_60min_R1 7 LGSLVDEFK 9 0 B1AHC9;P12956-2;P12956 B1AHC9 XRCC6 X-ray repair cross-complementing protein 6 1 LGS(1)LVDEFK;LGS(1)LVDEFK;LGS(1)LVDEFK;LGS(1)LVDEFK;LGS(1)LVDEFK;LGS(1)LVDEFK;LGS(1)LVDEFK 159.94 0.00014603 728746000.0 1559120.0 1419410.0 1321340.0 1275950.0 1317180.0 1294220.0 1250955.0 1533910.0 1643440.0 1482300.0 True False 1472632.5055713356 1351219.4130221524 1406515.690618752 1397215.904371645 1420834.5722709803 1286142.2929134672 1377413.7395442796 1528589.2242272848 1345032.7237509973 1469167.9752119482 1.0023581580988978 0.9197174426751441 0.9573552611748445 0.9510252931902338 0.9671015134031934 0.8754222217019964 0.9375468038946114 1.0404455106685566 0.9155064270693468 1.0 20.486567923115654 LGS(ph)PDYGNSALLSLPGYRPTTR ddPTM_KYSE-520_SHP099_60min_R1 4 LGSPDYGNSALLSLPGYRPTTR 22 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 LGS(0.999)PDYGNSALLSLPGYRPTTR;LGS(0.901)PDY(0.09)GNS(0.009)ALLSLPGYRPTTR;LGS(0.994)PDYGNS(0.006)ALLSLPGYRPTTR;LGS(0.985)PDYGNS(0.015)ALLSLPGYRPTTR 201.17 3.0522000000000005e-14 12825420000.0 3114960.0 3527610.0 3081570.0 2702560.0 2797970.0 2784640.0 2388110.0 2551670.0 3662450.0 2666400.0 True False 2942166.9592811884 3358138.320549439 3280212.93288633 2959410.4898457043 3018154.320728398 2767260.02885024 2629523.464507584 2542818.8523342567 2997441.4028512384 2642777.77042781 1.113285798073333 1.2706850943451924 1.241198926974224 1.1198105731631904 1.1420386362035362 1.0471028097085435 0.9949847065960146 0.9621765707233976 1.1342010805418632 1.0 21.333623684057237 -5.981049913884479 1.372694278500017 1.018849198573338 1.2083444053618546 0.6177651273975964 0.06036526628704497 0.26494715814777126 1.0322491571575856 0.025119999451245618 0.028758379361242526 1.0446001554161127e-06 5.981049913884479 0.1894952067885165 LGS(ph)PGAPQQEDAMDDKELIEYFK ddPTM_KYSE-520_SHP099_60min_R1 11 LGSPGAPQQEDAMDDKELIEYFK 23 1 H0YGG4 H0YGG4 EIF2B1 1 LGS(1)PGAPQQEDAMDDKELIEYFK;LGS(1)PGAPQQEDAMDDKELIEYFK;LGS(1)PGAPQQEDAMDDKELIEYFK;LGS(1)PGAPQQEDAMDDKELIEYFK;LGS(1)PGAPQQEDAMDDKELIEYFK;LGS(1)PGAPQQEDAMDDKELIEYFK;LGS(1)PGAPQQEDAMDDKELIEYFK;LGS(1)PGAPQQEDAMDDKELIEYFK;LGS(1)PGAPQQEDAMDDKELIEYFK;LGS(1)PGAPQQEDAMDDKELIEYFK;LGS(1)PGAPQQEDAMDDKELIEYFK 295.78 1.2158999999999999e-48 10918207000.0 6598550.0 6654760.0 5435071.0 5371112.0 5376060.0 5860020.0 5231778.0 5940500.0 7879250.0 6022560.0 True False 6232515.277616687 6335055.340601595 5785424.373081077 5881580.869596298 5799125.336402869 5823445.441515945 5760657.1774727935 5919893.7920231195 6448576.819728764 5969204.80388078 1.044111482582189 1.061289660640051 0.9692119073079514 0.9853206688054136 0.9715071817660977 0.9755814439018624 0.9650627456654859 0.9917390986776661 1.0803075169302832 1.0 22.509107322940054 -4.754946265503987 24.995700803933765 0.9894786713934436 1.0527005961687443 0.3643910244421902 0.03170727222717328 154.83612340942545 596036.3615054198 0.008292310770282285 0.020860857120382905 1.7581411322265002e-05 4.754946265503987 0.06322192477530075 LGS(ph)PHR ddPTM_KYSE-520_SHP099_60min_R1 1 LGSPHR 6 0 M0QXN6;M0QX46;Q6UUV9-3;Q6UUV9;Q6UUV9-2 M0QXN6 CRTC1 CREB-regulated transcription coactivator 1 1 LGS(1)PHR 58.917 0.062321 408520000.0 372910.0 338440.0 298190.0 308280.0 337720.0 316100.0 333810.0 268480.0 367360.0 280940.0 True False 352223.9389223451 322180.834391203 317411.80452086905 337578.8385122381 364296.6426360522 314127.1026486589 367554.7724716521 267548.70554370305 300656.68439198623 278451.09016801295 1.2649400607834533 1.1570464105448617 1.1399194175513834 1.2123451853197933 1.3082967009259738 1.1281230842340018 1.3199976062218877 0.9608463209185801 1.0797468388813805 1.0 18.08706441539965 -7.270913868924947 24.999507303558058 1.015222425473736 1.2129898546682336 0.6558085612783973 0.06801214645324785 430.677335010732 1136383.9162482123 0.03539008828111248 0.017340610343372424 5.3590292945680746e-08 7.270913868924947 0.19776742919449752 LGS(ph)PKPER ddPTM_KYSE-520_SHP099_60min_R1 10 LGSPKPER 8 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER;LGS(1)PKPER 118.28 0.00063901 235551600000.0 177510400.0 159064000.0 147481900.0 139050400.0 149583800.0 148752800.0 147610500.0 150435000.0 174843900.0 138594900.0 True False 167663544.25379038 151422326.68006855 156988819.2533832 152265708.2089729 161355194.04460114 147824378.59815058 162532409.87965265 149913176.09679282 143096655.2160387 137367057.01120058 1.220551330877821 1.102319071068997 1.1428418331811732 1.1084586910568923 1.1746280189393927 1.076126851768378 1.1831978744831095 1.0913328083062104 1.0417101329059626 1.0 27.033460821588413 -7.740110568059457 2.1466407003045025 1.003860122347016 1.1397996029103201 0.5946828679478824 0.040758301119472234 0.19890455790985206 1.7300175446474582 0.035088820187749094 0.010206283703659353 1.819237635632967e-08 7.740110568059457 0.13593948056330407 LGS(ph)PLAVDEALR ddPTM_KYSE-520_SHP099_60min_R1 12 LGSPLAVDEALR 12 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR;LGS(1)PLAVDEALR 246.25 1.6305999999999997e-15 10673060000.0 7717980.0 7333880.0 5668450.0 5670160.0 6561830.0 8237470.0 6719660.0 8586180.0 9182990.0 8640180.0 True False 7289848.263988303 6981549.396421686 6033847.356840679 6209050.301604232 7078208.689294468 8186056.894195647 7398948.810361763 8556396.54560948 7515590.500339635 8563634.72715832 0.8512563293795813 0.8152553931662592 0.7045895287552623 0.7250484752593584 0.8265425738964508 0.9559091618229303 0.8639963106900246 0.9991547769399967 0.8776168928019589 1.0 23.029791829718786 -6.104038023121715 3.8247282741757163 0.9342458624884437 0.772006813679105 0.6555018034853246 0.05691005663297762 0.15503887371547911 4.066609352089574 0.019644985894467188 0.01995466294893853 7.869768856930625e-07 6.104038023121715 -0.1622390488093387 LGS(ph)PLAVDEALRR ddPTM_KYSE-520_SHP099_60min_R1 10 LGSPLAVDEALRR 13 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR;LGS(1)PLAVDEALRR 248.06 2.5553e-16 30615040000.0 8787380.0 8162090.0 8055590.0 7076170.0 7813680.0 7643320.0 7097850.0 7570730.0 10673690.0 8386580.0 True False 8299926.514192255 7769970.944853141 8574866.220799714 7748687.06927191 8428572.162242295 7595615.204734394 7815369.946340477 7544468.904651667 8735616.95782856 8312281.425860502 0.9985136557540257 0.9347579258661566 1.031589978910276 0.9321973923025293 1.013990230891365 0.9137822476875634 0.9402196034924811 0.9076291475382344 1.0509289219504783 1.0 22.986813069189513 -6.250787066705405 24.696035653938534 0.9553455301053546 0.979538486950083 0.02760548261372109 0.048853020987969516 2016.8601577773918 4675843.442329833 0.015462829765299738 0.015296341991325334 5.613231236352859e-07 6.250787066705405 0.02419295684472844 LGS(ph)PPPHK ddPTM_KYSE-520_SHP099_60min_R1 2 LGSPPPHK 8 0 E9PJM7;E7EMB1;Q9UH65 E9PJM7 SWAP70 Switch-associated protein 70 1 LGS(1)PPPHK;LGS(1)PPPHK 81.525 0.056673 248050000.0 1562920.0 1371970.0 1206350.0 1083760.0 1200680.0 1200480.0 1158770.0 1220340.0 1436300.0 1182970.0 True False 1476221.7119962235 1306058.501831044 1284113.2512282454 1186760.2245556745 1295166.6850653046 1192987.3590245557 1275909.7801053792 1216106.9253694974 1175504.126176531 1172489.806136734 1.259048653787672 1.1139188545565344 1.0952020601861796 1.012171038370014 1.1046293778303982 1.0174820734308638 1.0882054354991846 1.037200425116256 1.002570870999492 1.0 20.161143949037182 -1.0000001653934134 0.7220809011221722 1.0385413890816912 33.39101729280146 0.7953669886013517 0.03396232971636732 136.46724068893346 0.6607206761793561 0.012449791878053394 7153.283723896965 0.09999996191676644 1.0000001653934134 32.352475903719764 LGS(ph)PSGK ddPTM_KYSE-520_SHP099_60min_R1 6 LGSPSGK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LGS(0.977)PS(0.023)GK;LGS(0.981)PS(0.019)GK;LGS(0.991)PS(0.009)GK;LGS(0.972)PS(0.028)GK;LGS(0.969)PS(0.031)GK;LGS(0.983)PS(0.017)GK 126.82 0.0022113000000000002 7953800000.0 15513590.0 12811140.0 12672230.0 13114880.0 14499100.0 16408330.0 21600490.0 9399600.0 17158800.0 18431610.0 True False 14653020.237125056 12195673.60448683 13489102.222084887 14361314.25206755 15640096.681405852 16305919.52610904 23784078.329667136 9366994.981483128 14043194.458147911 18268320.27497559 0.8021000298093709 0.6675859313235697 0.7383876579261971 0.786132169564601 0.8561321701169239 0.8925790264606486 1.301930225202323 0.5127452792862558 0.7687184287755583 1.0 24.122840652179736 -5.665745789714842 2.303021440137404 0.8882042464993947 0.7306721889085351 0.12493407695947711 0.18662813985683202 0.703394672513352 7.61415546559641 0.06345040029944642 0.08648057181170665 2.1590077947390613e-06 5.665745789714842 -0.15753205759085953 LGS(ph)PVDNLEDMDRDDLTDDSVFTR ddPTM_KYSE-520_SHP099_60min_R1 13 LGSPVDNLEDMDRDDLTDDSVFTR 24 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR;LGS(1)PVDNLEDMDRDDLTDDSVFTR 299.91 5.209600000000001e-49 10995689000.0 1616641.0 1590182.0 1485142.0 1284338.0 1403340.0 1403365.0 1374488.0 1467586.0 1827489.0 1429575.0 True False 1526962.7010360628 1513787.2698081569 1580876.6296312183 1406401.0973696993 1513774.8740876382 1394606.0784831853 1513434.6607501756 1462495.2867031463 1495663.064848723 1416910.0776925206 1.0776708593411701 1.0683721526445797 1.115721212319784 0.9925831705989872 1.0683634042273626 0.9842587052202649 1.0681232948916901 1.032172266771412 1.0555807940080812 1.0 20.434316771769545 -5.2558644438567095 24.999886383775284 1.0315067740412789 1.0853664813027295 0.4342247645553452 0.03047741380935121 450.2650393275628 2019134.1195330052 0.007820938900121567 0.013044480073775967 5.5479885505475656e-06 5.2558644438567095 0.05385970726145062 LGS(ph)QHSPGR ddPTM_KYSE-520_SHP099_60min_R1 1 LGSQHSPGR 9 0 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 LGS(0.855)QHS(0.145)PGR 113.99 0.00087625 677950000.0 653900.0 768930.0 1116400.0 957040.0 534660.0 710170.0 486730.0 512920.0 698140.0 666170.0 True False 617626.8634826674 731989.4486125394 1188364.9303031568 1047996.793855433 576734.7002007334 705737.5656058145 535933.4184270306 511140.8002364283 571375.3746772142 660268.2520724175 0.9354180843075379 1.108624330058286 1.7998214007309536 1.587228812783338 0.8734854332167371 1.0688649096646403 0.8116904254367359 0.7741411140579373 0.8653685420793886 1.0 19.332692752404952 -5.776674616521421 24.932686321434375 0.891767264276127 1.3715516706486783 0.4766513519781296 0.235293913631944 214.36400755152943 350808.4224780534 0.08006171304684916 0.09112209249825594 1.6723431032184064e-06 5.776674616521421 0.4797844063725514 LGS(ph)SSNLQFK ddPTM_KYSE-520_SHP099_60min_R1 3 LGSSSNLQFK 10 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 LGS(0.435)S(0.435)S(0.129)NLQFK;LGS(0.495)S(0.495)S(0.011)NLQFK;LGS(0.829)S(0.158)S(0.014)NLQFK 203.78 7.3727e-07 3121940000.0 9195000.0 8615300.0 7599780.0 6951130.0 7446370.0 8021540.0 7521300.0 8652300.0 10089300.0 8369400.0 True False 8684935.020221943 8201408.05617106 8089673.97887793 7611763.305266558 8032356.9549503075 7971474.593420825 8281626.404814224 8622287.190761996 8257337.450555492 8295253.627294666 1.0469764289840482 0.9886868352264941 0.9752171955610498 0.9176046504739584 0.9683075787484876 0.960968157404075 0.9983572265427059 1.0394241789535235 0.9954291720973528 1.0 22.983854661565758 -6.960813268257956 5.951730655199224 1.0142471950314251 0.9740165911691636 0.20027097873069655 0.03181282175984015 0.2769760663102268 25.577161690596057 0.014525241990346615 0.00957176900957725 1.0944268311495517e-07 6.960813268257956 -0.040230603862261516 LGS(ph)VDSFER ddPTM_KYSE-520_SHP099_60min_R1 5 LGSVDSFER 9 0 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 1 LGS(1)VDSFER;LGS(0.999)VDS(0.001)FER;LGS(0.999)VDS(0.001)FER;LGS(1)VDSFER;LGS(1)VDSFER 217.78 5.7809e-09 15836700000.0 9374800.0 8512900.0 8048400.0 8748800.0 9786000.0 10677000.0 10906200.0 11592500.0 12911500.0 11511000.0 True False 8854761.155799534 8103927.50587659 8567212.741895314 9580283.321577363 10556102.525276586 10610360.882567955 12008705.130254729 11552288.32320983 10567097.072427941 11409021.495422484 0.7761192455770403 0.7103087244710722 0.7509156455996373 0.8397112167262683 0.9252417071448147 0.9299974486703381 1.0525622320084898 1.0125573282375553 0.9262053784952251 1.0 23.4436717271583 -5.706162521440663 1.294199082155125 0.9936415039917877 0.7342236797181596 0.889241588897902 0.03717506967938012 0.1331033579586837 0.466447926110323 0.014836477190678573 0.02239286753441141 1.967150006163015e-06 5.706162521440663 -0.25941782427362814 LGS(ph)VEAPK ddPTM_KYSE-520_SHP099_60min_R1 1 LGSVEAPK 8 0 P46087-2;P46087;P46087-4;P46087-3;F5H359;F5GWB7;F5H709;F5H5X6 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 LGS(1)VEAPK 98.257 0.0030174 348980000.0 774870.0 846240.0 755690.0 710250.0 748870.0 1034700.0 1040300.0 1498800.0 1511900.0 1295900.0 True False 731886.4164349502 805585.3601678644 804402.9865467506 777751.9464555517 807801.8085125552 1028242.0534975223 1145463.6763496003 1493601.0126225483 1237377.071897441 1284419.3341949428 0.5698189033363368 0.6271980954512761 0.6262775443589378 0.6055280590610514 0.6289237377595804 0.8005501210724228 0.8918144143848177 1.162860891967745 0.9633746853188042 1.0 20.29268485636224 -6.658841987320704 1.6022938418762676 1.046864193060088 0.6086159529595458 0.9144212443239497 0.0574277851286018 0.09377889622587747 0.4918596826413016 0.0288653900996555 0.01911597837562812 2.1936029054797613e-07 6.658841987320704 -0.4382482401005421 LGS(ph)YSGPTSVSR ddPTM_KYSE-520_SHP099_60min_R1 8 LGSYSGPTSVSR 12 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 LGS(0.998)YS(0.002)GPTSVSR;LGS(0.999)YS(0.001)GPTSVSR;LGS(0.982)YS(0.018)GPTSVSR;LGS(0.998)YS(0.002)GPT(0.001)SVSR;LGS(0.999)YS(0.001)GPTSVSR;LGS(0.85)YS(0.15)GPTSVSR;LGS(0.987)YS(0.013)GPTSVSR;LGS(0.985)YS(0.015)GPTSVSR 248.7 1.2534e-15 33227260000.0 14690190.0 13481880.0 11203190.0 12037830.0 10974980.0 12899390.0 11886150.0 14977710.0 15941250.0 13629020.0 True False 13875295.876532257 12834190.248085553 11925365.553137777 13181901.743894445 11838648.486905795 12818880.12222422 13087718.039645106 14925755.819833776 13046720.846210115 13508277.486017114 1.027169888307007 0.9500982091440354 0.8828191133534337 0.9758388334515254 0.8763995630945833 0.948964820680763 0.9688665378093289 1.1049340550846651 0.9658315695480217 1.0 23.687340384706655 -7.020405656473115 16.311278220342214 1.0286112498705642 0.9411181554738486 0.3205631766775592 0.051889281047095843 9.620293328882385 7687.840285517358 0.023202971199776302 0.013793529845605739 9.541009835026099e-08 7.020405656473115 -0.0874930943967156 LGSAPAASPALAS(ph)PEGPK ddPTM_KYSE-520_SHP099_60min_R1 5 LGSAPAASPALASPEGPK 18 0 Q6ZUT6-4;Q6ZUT6;Q6ZUT6-2 Q6ZUT6-4 C15orf52 Uncharacterized protein C15orf52 1 LGSAPAASPALAS(1)PEGPK;LGSAPAASPALAS(1)PEGPK;LGSAPAASPALAS(1)PEGPK;LGSAPAASPALAS(1)PEGPK;LGSAPAASPALAS(1)PEGPK 367.94 2.1588999999999995e-72 2181340000.0 1743250.0 2187960.0 1584600.0 1427350.0 1509070.0 2062990.0 1598820.0 2324650.0 2065670.0 2359360.0 True False 1646548.4474172783 2082847.117405083 1686745.851449645 1563004.914851573 1627825.2235662292 2050114.1141827172 1760444.328579512 2316586.3317273906 1690596.3993031231 2338457.9059543023 0.7041172061403165 0.8906925851013312 0.721306912198319 0.6683912979026774 0.6961105519245724 0.8766948975060063 0.7528227572953003 0.9906470096505816 0.7229535306145299 1.0 21.157126028691437 -6.824617275353639 1.3088692950683196 0.8920941255023216 0.7451256365684183 0.2921274281216929 0.1002794521669269 0.6212069840735562 2.1204082978287797 0.06441875742237436 0.03518030396770144 1.49755480400986e-07 6.824617275353639 -0.14696848893390324 LGSFGS(ph)ITR ddPTM_KYSE-520_SHP099_60min_R1 3 LGSFGSITR 9 0 Q14315;Q14315-2 Q14315 FLNC Filamin-C 1 LGSFGS(0.986)IT(0.014)R;LGSFGS(0.995)IT(0.005)R;LGS(0.063)FGS(0.937)ITR 131.42 0.00055523 174910000.0 507531.0 452977.0 464781.0 402783.0 420907.0 428214.0 385695.0 407360.0 460597.0 422442.0 True False 479377.24369203486 431215.30498766084 494741.52693589363 441063.3752188756 454029.98626676755 425541.3575880822 424684.81462045433 405946.9632385389 376964.1955054874 418699.4925349029 1.1449195717667937 1.0298921127823308 1.1816148234157506 1.0534127293744175 1.0843815059769137 1.016340753153908 1.0142950306658243 0.9695425250717232 0.9003215963393211 1.0 18.675555643965176 -6.54709243493644 0.9734959227257057 0.9502156575258264 1.1071260252908917 0.6456880883773686 0.04633969523157434 0.33390809124130083 0.6495291561025427 0.029640095106548466 0.0205305181390336 2.837315071998135e-07 6.54709243493644 0.15691036776506528 LGSFGSITR ddPTM_KYSE-520_SHP099_60min_R1 4 LGSFGSITR 9 0 Q14315;Q14315-2 Q14315 FLNC Filamin-C 0 ;;; 182.73 7.2117e-05 1652910000.0 3428030.0 3792210.0 3267100.0 3568030.0 3236260.0 3138780.0 3024800.0 3107610.0 3772810.0 2787230.0 False True 3237870.342291616 3610026.539376738 3477702.4935448286 3907134.498432665 3490935.2501994236 3119189.7097486746 3330576.3032031776 3096830.4262316236 3087762.808800443 2762537.310632125 1.172063931889747 1.3067792878246014 1.2588798276715616 1.4143282276750981 1.2636699011318064 1.1291031971745353 1.2056221975300938 1.1210094482028934 1.1177270970844915 1.0 21.397562518896276 -7.292087522827257 0.6468935471477653 1.0157334795470008 1.2893512139263674 0.6311443828710526 0.06754648175215477 0.48248053878914654 0.4102391437284203 0.06707605911815784 0.03488307628224054 5.104021289032344e-08 7.292087522827257 0.27361773437936665 LGSLS(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 1 LGSLSAR 7 0 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79;H0Y4T4;Q00G26 H0Y2V6 CEP170;PLIN5 Centrosomal protein of 170 kDa;Perilipin-5 1 LGS(0.486)LS(0.514)AR 146.27 0.0014723 983070000.0 284790.0 280970.0 280390.0 299810.0 275200.0 328820.0 310800.0 330140.0 419540.0 403570.0 True False 268992.1309852097 267471.7794554316 298464.3880398621 328303.8522588364 296856.6743261921 326767.7124104139 342218.6971156933 328994.8213952553 343362.1117427426 399994.68377270864 0.6724892652274866 0.6686883358865306 0.7461708871347408 0.8207705391539415 0.7421515494312838 0.8169301384917782 0.855558113642716 0.822497984953725 0.8584166882024195 1.0 18.60962130007252 -2.5153288520311983 0.08132136456388267 1.1882773359790537 1.4809763558994257e-11 0.8932452809726683 0.030557491781499406 43.73327159146938 0.3552094913229048 1.0112429799024523 6.0544430157594595 0.003052608772630622 2.5153288520311983 -1.188277335964244 LGSPKPER ddPTM_KYSE-520_SHP099_60min_R1 1 LGSPKPER 8 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 0 60.828 0.037172000000000004 447000000.0 530490.0 435440.0 411740.0 387830.0 454590.0 494760.0 441740.0 440930.0 544570.0 433610.0 False True 501062.66219440283 414520.8087912352 438281.41920729325 424689.24659465824 490363.6467367133 491672.0193180966 486395.3901669444 439400.5167438354 445689.8154925519 429768.55274347495 1.1658895444904334 0.9645210338101657 1.0198080255278696 0.9881812987097535 1.1409947135648313 1.1440390791263204 1.1317612400022892 1.022411979515192 1.0370461324995555 1.0 18.713200395404293 -4.214682401008865 22.266212348664062 1.056046474185131 1.1658913610159303 0.2290565853556521 0.0629451692705334 15867.498035439556 7555533.3852495635 0.017154292832753267 8.288667925708651 6.099828138115016e-05 4.214682401008865 0.1098448868307993 LGSPS(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 1 LGSPSGK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LGS(0.267)PS(0.733)GK 57.708 0.050813 2332200000.0 895340.0 746230.0 768740.0 786880.0 953970.0 1111900.0 1224900.0 536240.0 1118800.0 1235300.0 True False 845673.7053839605 710379.9906859337 818294.2104274889 861664.8386159017 1029042.0116531891 1104960.2196616377 1348724.8458719845 534379.9085993569 915654.1226528586 1224356.2030488572 0.6907088829852683 0.5802069601288952 0.6683465223517435 0.7037697334078173 0.8404760061579284 0.9024826410076553 1.1015788073057726 0.43645787661193625 0.7478657929552875 1.0 20.223591912984887 -5.587199304490941 2.9594247711890467 0.8264206040142517 0.6421674003458798 0.2165837878133151 0.16654446481906596 0.461642311815403 8.196818003998482 0.05422665556851229 0.07517624718184165 2.5870254165017546e-06 5.587199304490941 -0.18425320366837183 LGSQHS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 3 LGSQHSPGR 9 0 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 LGSQHS(1)PGR;LGS(0.003)QHS(0.997)PGR;LGSQHS(1)PGR 109.39 0.00097852 1374890000.0 1239554.0 1490500.0 1977940.0 1904710.0 1186086.0 1397130.0 1067939.0 1065723.0 1274683.0 1219810.0 True False 1170793.4686303625 1418894.1427138867 2105441.1772158938 2085733.0657280553 1279424.220293806 1388409.9934309407 1175896.696200244 1062026.2556546177 1043232.6993435066 1209003.4323978184 0.9683954877682407 1.173606380835323 1.7414683207641264 1.7251671995599034 1.0582469710249887 1.1483921023096724 0.9726165076869022 0.8784311336058818 0.8628864661487863 1.0 20.205386909772486 -5.924716791236235 8.536471993371478 0.9800465448416567 1.4098584087461252 0.4499291805341843 0.2265031646619957 0.2853151276074428 29.05445969378348 0.07837467546522163 0.08894850328774125 1.1892775170920226e-06 5.924716791236235 0.42981186390446857 LGSQPIRAS(ph)NPDLR ddPTM_KYSE-520_SHP099_60min_R1 9 LGSQPIRASNPDLR 14 1 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4;Q9UKE5-5;Q9UKE5-8;Q9UKE5-3;Q9UKE5-7 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 1 LGS(0.027)QPIRAS(0.973)NPDLR;LGSQPIRAS(1)NPDLR;LGS(0.001)QPIRAS(0.999)NPDLR;LGS(0.001)QPIRAS(0.999)NPDLR;LGSQPIRAS(1)NPDLR;LGSQPIRAS(1)NPDLR;LGSQPIRAS(1)NPDLR;LGSQPIRAS(1)NPDLR;LGSQPIRAS(1)NPDLR 171.98 1.3731e-08 17439350000.0 14215800.0 13831410.0 13890100.0 12367610.0 12959740.0 12519750.0 12001390.0 13415290.0 16785140.0 12863640.0 True False 13427221.235505266 13166928.302230343 14785478.07094577 13543023.935942473 13979597.807166142 12441609.596284533 13214607.623479096 13368755.490142226 13737381.694945857 12749678.157360492 1.0531419750194733 1.0327263276547078 1.1596746120536379 1.0622247690326188 1.096466721326264 0.9758371499834206 1.0364659766607673 1.0485563106096396 1.0774688996376867 1.0 23.603957493519953 -6.222772420662911 24.991686926169674 1.0312504099663211 1.0815182788072955 0.2992673259718507 0.04049696761977097 771.4501046291927 498613.1190714691 0.013608347632159073 0.013608295002667753 5.987252573521462e-07 6.222772420662911 0.05026786884097434 LGSQPIRAS(ph)NPDLRR ddPTM_KYSE-520_SHP099_60min_R1 2 LGSQPIRASNPDLRR 15 2 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4;Q9UKE5-5;Q9UKE5-8;Q9UKE5-3;Q9UKE5-7 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 1 LGSQPIRAS(1)NPDLRR;LGSQPIRAS(1)NPDLRR 145.52 5.2152e-06 1911120000.0 1088970.0 1077610.0 1152400.0 885330.0 935250.0 886640.0 810920.0 803190.0 1272450.0 856520.0 True False 1028562.6632921234 1025839.9980744129 1226685.5479051918 969471.4970158293 1008848.8541554172 881106.1508775912 892895.7074165314 800403.9213559544 1041405.1558541568 848931.8991624772 1.2115962002451113 1.2083890346050916 1.4449752083946796 1.1419897143366526 1.1883743032282186 1.037899685177169 1.0517872025982615 0.9428364302785669 1.2267240244848452 1.0 19.695289300675434 -5.902287658784526 1.6923020504274682 1.048124591106591 1.2742301754048726 0.49109527517899665 0.0980884111355996 0.2992243085154033 1.7607795909646509 0.03595737637085522 0.04289577672976139 1.2523114206479391e-06 5.902287658784526 0.22610558429828154 LGSS(ph)FTK ddPTM_KYSE-520_SHP099_60min_R1 2 LGSSFTK 7 0 E7EUC7;A0A087WYS1;Q16851-2;Q16851 E7EUC7 UGP2 UTP--glucose-1-phosphate uridylyltransferase 1 LGS(0.022)S(0.978)FTK;LGS(0.019)S(0.981)FTK 102.62 0.004610800000000001 527290000.0 1736180.0 1704290.0 1470590.0 1385840.0 1584130.0 1624870.0 1381560.0 1554960.0 1837290.0 1708630.0 True False 1639870.6344109743 1622413.3502085542 1565386.5844271956 1517549.81693201 1708792.0185332494 1614728.5836150765 1521221.5675262457 1549566.2066903939 1503684.4503118258 1693492.867494027 0.9683363100534336 0.958027861439621 0.9243538100893223 0.8961064118195128 1.0090340805874558 0.9534900409734214 0.8982745642013229 0.9150119474570857 0.8879189745492858 1.0 20.69157047995154 -6.740542943075989 24.428595517839057 0.9182190322118552 0.9507076346092455 0.08570618689845655 0.03932451964189742 380.0992861110921 444347.66114184883 0.014932772727880034 0.011553194127996217 1.817427339837677e-07 6.740542943075989 0.032488602397390265 LGSS(ph)SNLQFK ddPTM_KYSE-520_SHP099_60min_R1 3 LGSSSNLQFK 10 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 LGS(0.075)S(0.912)S(0.013)NLQFK;LGS(0.347)S(0.652)S(0.001)NLQFK;LGS(0.04)S(0.48)S(0.48)NLQFK 179.6 1.5853e-05 3704800000.0 4204200.0 3797600.0 3279740.0 3049910.0 3294770.0 3370530.0 3435550.0 3620200.0 4365400.0 3603500.0 True False 3970984.6451350837 3615157.5956861917 3491157.288169539 3339772.529411123 3554049.6543230666 3349493.2720353757 3782848.921736869 3607642.3711610283 3572753.4027786814 3571575.7934805737 1.1118298685928987 1.012202401608044 0.977483746681835 0.9350977614719598 0.9950928833179185 0.9378194572125336 1.0591540374537047 1.0100982254797137 1.000329717011818 1.0 21.76812930684238 -4.280008548086547 3.0894310234033635 0.988819220039562 1.128232039735721 0.5411586125256957 0.03367390538076151 0.2710708881760918 4.02871008941462 0.00903592124647771 0.09015546576248268 5.2479713072538574e-05 4.280008548086547 0.13941281969615904 LGSSGLGS(ph)ASSIQAAVR ddPTM_KYSE-520_SHP099_60min_R1 2 LGSSGLGSASSIQAAVR 17 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 LGSSGLGS(0.993)AS(0.006)S(0.001)IQAAVR;LGSS(0.004)GLGS(0.925)AS(0.037)S(0.034)IQAAVR 258.68 2.0404999999999998e-29 880420000.0 857290.0 863860.0 706050.0 562160.0 660030.0 836490.0 666350.0 901170.0 1094280.0 832130.0 True False 809734.4147347541 822358.8689197047 751563.112719942 615587.5173804326 711970.6059430112 831269.1556297903 733711.1609492988 898044.0516046592 895586.3365539594 824757.9755873427 0.9817842793919153 0.9970911385659174 0.9112529189969023 0.7463856496107824 0.8632479188042878 1.0078946554445996 0.8896078397141829 1.0888576748410665 1.0858777520959126 1.0 19.65361129846639 -7.261275796442077 24.999576927854786 1.065525792165305 0.9122179009167526 0.4338861380881299 0.07540539913112114 14.638777122982665 2237643.9283147375 0.04183785627314866 0.022163395810024057 5.4792889503003535e-08 7.261275796442077 -0.15330789124855237 LGSVDS(ph)FER ddPTM_KYSE-520_SHP099_60min_R1 2 LGSVDSFER 9 0 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 1 LGSVDS(1)FER;LGS(0.001)VDS(0.999)FER 99.34299999999999 0.0026259 756050000.0 1872030.0 1774580.0 1422380.0 1518980.0 1528870.0 1040000.0 1154670.0 981310.0 1315830.0 897120.0 True False 1768184.7641007153 1689326.5131011154 1514068.8906884675 1663343.4025020099 1649183.3709196402 1033508.9742315876 1271395.3120932349 977906.0646494768 1076908.4413749669 889172.2147487983 1.9885740183640899 1.8998867543093103 1.7027847537006202 1.870665069051808 1.8547401094686187 1.1623271140153273 1.4298639689865018 1.0997937727122375 1.2111359571432474 1.0 19.76210334152594 -6.259190666385056 24.954212508466526 1.2024387445925029 1.85684939778571 0.8870371481462517 0.12167953471450066 64.0053649764647 710276.6773828402 0.04097865692441085 0.03910007989747804 5.505659308137656e-07 6.259190666385056 0.654410653193207 LGSYS(ph)GPTSVSR ddPTM_KYSE-520_SHP099_60min_R1 1 LGSYSGPTSVSR 12 0 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 LGS(0.253)YS(0.747)GPTSVSR 289.45 1.2399e-29 9102400000.0 2603900.0 2417800.0 2132300.0 2222600.0 2017000.0 2482600.0 2477300.0 2690500.0 2840000.0 2550300.0 True False 2459456.476254042 2301645.258808212 2269751.469800629 2433835.2357509425 2175726.424839858 2467105.172526291 2727729.660118104 2681167.283467423 2324327.590573937 2527706.3261033758 0.9729992961822643 0.9105667201285793 0.8979490403458377 0.9628631343036034 0.8607512678080298 0.9760252395813301 1.0791323469617917 1.0607115453956304 0.9195402039275028 1.0 21.269397427425645 -6.519406255382463 24.814189461725018 1.0210015406961204 0.9211771847717347 0.44486722708817217 0.0494147876600978 114.73941943512466 819934.1680377616 0.01826321453313237 0.014449396935625853 3.0240832634338073e-07 6.519406255382463 -0.09982435592438565 LGTLNGS(ph)QEEMWQK ddPTM_KYSE-520_SHP099_60min_R1 3 LGTLNGSQEEMWQK 14 0 H0YDJ4;H9KV85;E9PN67;C9J066;Q8N4C6-11;Q8N4C6-4;Q8N4C6-9;Q8N4C6-2;Q8N4C6;Q8N4C6-5;Q8N4C6-10;Q8N4C6-7 H0YDJ4 NIN Ninein 1 LGTLNGS(1)QEEMWQK;LGTLNGS(1)QEEMWQK;LGTLNGS(1)QEEMWQK 276.67 2.7574e-25 1709860000.0 1570880.0 1461150.0 1308620.0 1193850.0 1339870.0 1411860.0 1227810.0 1300450.0 1655210.0 1366670.0 True False 1483740.1549283573 1390954.1607691357 1392975.7390660308 1307313.1450559096 1445310.1461825382 1403048.058037124 1351929.0170708462 1295939.0424773125 1354665.5884485529 1354562.36705317 1.0953649614201313 1.0268660894478676 1.0283585111672846 0.9651184595508508 1.0669941682543482 1.0357943585052005 0.9980559403934626 0.9567215759113464 1.000076202763264 1.0 20.369395389270103 -6.86941954447795 4.201115463622151 0.9827909395246613 1.0337431082520956 0.3325173373855649 0.033164830177448625 0.26859472083018504 8.491388927885819 0.014749810300799606 0.009752515670059662 1.3507670419521396e-07 6.86941954447795 0.050952168727434244 LGVADIIDCVVLTS(ph)SPEATETSQQLQLR ddPTM_KYSE-520_SHP099_60min_R1 1 LGVADIIDCVVLTSSPEATETSQQLQLR 28 0 Q8NCF5;H3BSZ7;Q8NCF5-3;Q8NCF5-2 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 LGVADIIDCVVLT(0.064)S(0.495)S(0.428)PEAT(0.013)ETSQQLQLR 116.72 0.00022221 56601000.0 34653.0 52223.0 40453.0 28604.0 37382.0 52121.0 31976.0 43588.0 50986.0 47174.0 True False 32730.72901095713 49714.12869167891 43060.665107088505 31322.515559893793 40323.75072551495 51795.693505696734 35208.44613568662 43436.80340151568 41728.227652465735 46756.075060816635 0.7000315781079478 1.0632656532229163 0.9209640683286304 0.6699132790584308 0.8624280518213938 1.1077853185564648 0.753023988645117 0.9290087618564324 0.8924664356062593 1.0 15.512866207452426 -6.027094305635685 24.989575997700495 0.927727750146637 0.8486933898584651 0.10887672657537306 0.13218826766402633 2140.1163948283474 1973864.982006316 0.043979157552731185 0.04409957349592503 9.395192748546391e-07 6.027094305635685 -0.0790343602881719 LGVADIIDCVVLTSS(ph)PEATETSQQLQLR ddPTM_KYSE-520_SHP099_60min_R1 1 LGVADIIDCVVLTSSPEATETSQQLQLR 28 0 Q8NCF5;H3BSZ7;Q8NCF5-3;Q8NCF5-2 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 LGVADIIDCVVLT(0.011)S(0.097)S(0.866)PEAT(0.022)ET(0.003)SQQLQLR 146.64 9.185799999999999e-07 62398000.0 33219.0 50855.0 37205.0 27771.0 32712.0 44319.0 25170.0 40056.0 50924.0 41390.0 True False 31376.275849565267 48411.84946508874 39603.29383010475 30410.347490344408 35286.24829418022 44042.38868170167 27714.42923552764 39917.05508514068 41677.48528957296 41023.31680093273 0.7648400542993607 1.1801056872122055 0.9653849790420727 0.7412942166015446 0.8601510322875194 1.0735940464155813 0.6755774860919465 0.9730333429361593 1.0159462603137286 1.0 15.324156520289916 -7.507958410589941 24.7180076680739 1.0034787656728048 0.9018565523184875 0.09615885543003988 0.1444351410763176 1559.0030848952836 2582771.95799993 0.08374762702062427 0.037973038999908594 3.104856904787114e-08 7.507958410589941 -0.10162221335431731 LGVATVAK ddPTM_KYSE-520_SHP099_60min_R1 2 LGVATVAK 8 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 0 ; 138.9 0.004919 1500960000.0 2709700.0 4072700.0 2319000.0 7734400.0 4339700.0 3121700.0 2449100.0 3528300.0 5147100.0 2928900.0 False True 2559387.53934697 3877041.3787526703 2468486.450531188 8469475.050567856 4681209.700484647 3102216.3123641834 2696678.928912626 3516061.150811409 4212516.387832085 2902952.224649718 0.8816499002686123 1.3355512177677984 0.8503365744605202 2.9175385590749148 1.6125686329713886 1.0686418763707037 0.928943613337632 1.211201865795663 1.451114610864939 1.0 21.469089398323508 -6.261348451953275 24.647295333927467 1.132490706164458 1.5497978383496314 0.10915619629200612 0.5501820380273582 16.65975823328814 4516158.060322278 0.1983027920555026 0.18635936395560923 5.478372366604466e-07 6.261348451953275 0.41730713218517335 LGVIEDHSNR ddPTM_KYSE-520_SHP099_60min_R1 11 LGVIEDHSNR 10 0 P14625;Q58FF3 P14625 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein 0 ;;;;;;;;;; 223.31 3.8852e-09 11962960000.0 14692940.0 14182380.0 9529690.0 8500950.0 13324830.0 13471550.0 9907120.0 11666580.0 11725030.0 11381760.0 False True 13877893.328550274 13501037.176613633 10143989.065443104 9308877.732096175 14373418.313088203 13387469.059432244 10908628.373773577 11626111.356980255 9596060.11595321 11280926.461275296 1.230208651407288 1.196802161857844 0.8992159553796379 0.8251873429058606 1.27413456354216 1.1867348932189392 0.9669975609911359 1.030598984656969 0.8506446832087926 1.0 23.427382220086617 -4.653606750838071 7.3733257108243695 1.014013316936033 1.2206059827278486 0.2836043127690778 0.13264164931451383 0.3074758363088642 18.765212786746282 0.036300531258834756 0.09709381406870848 2.220205883354897e-05 4.653606750838071 0.20659266579181557 LGVNNISGIEEVNMFTNQGTVIHFNNPK ddPTM_KYSE-520_SHP099_60min_R1 3 LGVNNISGIEEVNMFTNQGTVIHFNNPK 28 0 P20290-2;P20290 P20290-2 BTF3 Transcription factor BTF3 0 ;; 253.29 2.2555e-31 789167000.0 886714.0 855948.0 728884.0 1046316.0 766310.0 741557.0 671768.0 862591.0 787026.0 602494.0 False True 837526.2067994649 814826.9732758595 775869.0288956352 1145757.5580536227 826614.2372925307 736928.6676963973 739676.8652638831 859598.8731512523 644121.9177109302 597156.3718932385 1.402524106280826 1.364511896092665 1.2992727958939831 1.9186893282593405 1.3842508867012733 1.2340631405472933 1.2386652811202439 1.4394870650479035 1.0786486555754082 1.0 19.18774924079259 -6.1277173889816785 4.561806008722534 1.229604772782711 1.4908200447190103 0.34373821303091756 0.19138645344554917 0.3094322754675757 10.11520752215496 0.06542415288605816 0.06580173131370665 7.452167554659001e-07 6.1277173889816785 0.26121527193629923 LGVS(ph)VS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 4 LGVSVSPSR 9 0 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 2 LGVS(1)VS(1)PSR;LGVS(1)VS(1)PSR;LGVS(1)VS(0.955)PS(0.045)R;LGVS(1)VS(0.995)PS(0.005)R 118.23 0.0015179 954500000.0 5258520.0 5108210.0 5355580.0 4586450.0 5180740.0 4836290.0 4625670.0 5024450.0 6207800.0 5165410.0 True False 4966819.413000265 4862803.924020469 5700809.256030977 5022344.829033521 5588434.763621639 4806104.920179308 5093277.865788757 5007021.355665443 5080620.005903134 5119648.486028165 0.9701485222188634 0.9498316021678754 1.1135157563236686 0.9809940746400478 1.091566106320155 0.9387568176400126 0.9948491346014526 0.9780010032583121 0.992376726599191 1.0 22.287613327816402 -6.295249412897958 24.998702567498384 0.9803000872062728 1.020139488319242 0.13889374378689134 0.050271553317106546 1381.4984025654771 1021458.0337170708 0.017572243897413263 0.015498199083707736 5.066996299298605e-07 6.295249412897958 0.03983940111296924 LGVSVS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 14 LGVSVSPSR 9 0 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 LGVS(0.039)VS(0.96)PS(0.001)R;LGVS(0.005)VS(0.993)PS(0.002)R;LGVSVS(1)PSR;LGVS(0.001)VS(0.999)PSR;LGVSVS(0.996)PS(0.003)R;LGVS(0.004)VS(0.903)PS(0.093)R;LGVS(0.001)VS(0.996)PS(0.002)R;LGVSVS(0.992)PS(0.008)R;LGVS(0.001)VS(0.841)PS(0.158)R;LGVS(0.001)VS(0.992)PS(0.007)R;LGVSVS(0.998)PS(0.002)R;LGVS(0.001)VS(0.999)PSR;LGVSVS(0.965)PS(0.035)R;LGVSVS(0.991)PS(0.009)R 176.62 4.6168e-05 120892040000.0 26107470.0 24922180.0 22621280.0 18253590.0 19572990.0 23866880.0 19867340.0 22710750.0 27813030.0 23674470.0 True False 24659236.59514887 23724881.06384516 24079483.904127717 19988405.705458034 21113272.95792081 23717917.948950384 21875724.61375319 22631971.708978917 22762884.861429814 23464732.61425896 1.0509063538258279 1.0110867851708703 1.0261989471593291 0.8518488590537595 0.8997874940663408 1.0107900370676957 0.9322810096911068 0.964510104633624 0.9700892499238346 1.0 24.48399068484703 -5.066990624122861 24.999515737030283 0.9451282606911598 1.027909147177363 0.41476245535582057 0.04478262012285801 176.1926044287296 65750.9545178949 0.01251052297682308 0.021668878407558156 8.570563478101033e-06 5.066990624122861 0.08278088648620308 LGWDPKPGEGHLDALLR ddPTM_KYSE-520_SHP099_60min_R1 3 LGWDPKPGEGHLDALLR 17 1 E9PLK3;P55786-2;P55786 E9PLK3 NPEPPS Puromycin-sensitive aminopeptidase 0 ;; 89.846 0.0017139 1818172000.0 3532420.0 2955120.0 2083310.0 2098700.0 3801830.0 3141140.0 2288150.0 2404930.0 2460430.0 2117460.0 False True 3336469.620895311 2813151.599474446 2217603.4960138556 2298159.817002834 4101012.3915463216 3121534.9801132795 2519458.532192 2396587.859144881 2013677.934392899 2098700.9517589537 1.589778485638444 1.3404251792599131 1.056655305823942 1.0950392027395377 1.9540718214804256 1.4873653044742143 1.2004847713441036 1.1419387107707095 0.9594877882459645 1.0 21.00106517799762 -7.162441674470876 2.1999028131661644 1.0126528904818242 1.4055498412191108 0.34185699438949313 0.24168586978818943 0.44021219343164225 4.081349012716042 0.1684393767323975 0.07783831076607492 6.879522977504265e-08 7.162441674470876 0.3928969507372866 LGYLPVQTVLEGDNLET(ph)PSQS(ph)PQLFHDDTHSR ddPTM_KYSE-520_SHP099_60min_R1 3 LGYLPVQTVLEGDNLETPSQSPQLFHDDTHSR 32 0 Q5JT44;Q5JT49;H0Y337 Q5JT44 UTRN 2 LGYLPVQTVLEGDNLET(0.998)PS(0.073)QS(0.929)PQLFHDDTHSR;LGYLPVQTVLEGDNLET(0.992)PS(0.079)QS(0.929)PQLFHDDTHSR;LGYLPVQTVLEGDNLET(0.972)PS(0.206)QS(0.816)PQLFHDDT(0.003)HS(0.003)R 195.5 1.1197e-15 413520000.0 134403.0 133791.0 135735.0 168064.0 133662.0 130606.0 113384.0 136431.0 194079.0 148679.0 True False 126947.39766426195 127363.47953561472 144484.69528367886 184036.75202971583 144180.43896725084 129790.83950816406 124845.96124120263 135957.75270423485 158839.14593345043 147361.81973051155 0.8614673590243216 0.8642908982023372 0.9804757809580918 1.248876760386603 0.978411092038096 0.8807630073075884 0.8472069730783396 0.9226117928841275 1.0778853452266544 1.0 17.169003256532275 -4.7684699783830204 6.78089879524229 0.9890641569190008 0.8620025864571016 0.19241363502595477 0.10579318894468266 0.24075389296311336 53.60269823339104 0.030634948947956743 0.07112676278854851 1.704237124601941e-05 4.7684699783830204 -0.12706157046189925 LGYLVS(ph)PPQQIR ddPTM_KYSE-520_SHP099_60min_R1 3 LGYLVSPPQQIR 12 0 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LGYLVS(1)PPQQIR;LGYLVS(1)PPQQIR;LGYLVS(1)PPQQIR 115.83 0.00040073 382930000.0 991426.0 1003860.0 853448.0 763874.0 776102.0 1019161.0 687427.0 900927.0 1053580.0 953981.0 True False 936429.6234212682 955633.058775421 908462.6236450805 836472.3552929069 837176.8119836701 1012800.0381604233 756918.8298009953 897801.894514943 862276.4305904544 945529.4705259876 0.9903759244017458 1.0106856407593652 0.9607977878676937 0.884660268524033 0.8854053079043194 1.0711459237722267 0.8005237841819248 0.9495229101801616 0.9119508777561206 1.0 19.850762899633633 -4.980641737496804 5.041222625373802 0.9253378373474894 0.9986380581129236 0.14709651645086164 0.06831404347443791 0.31459330242803 22.28809531945063 0.017632620324187217 0.036409671424568954 1.0455823957346717e-05 4.980641737496804 0.07330022076543419 LHAVDEELAS(ph)SPVCMDSFQPMDDSLIAFR ddPTM_KYSE-520_SHP099_60min_R1 4 LHAVDEELASSPVCMDSFQPMDDSLIAFR 29 0 Q3T8J9-3;Q3T8J9;A0A087WUE6;Q3T8J9-2;A4PB68 Q3T8J9-3 GON4L GON-4-like protein 1 LHAVDEELAS(0.499)S(0.499)PVCMDS(0.001)FQPMDDSLIAFR;LHAVDEELAS(0.5)S(0.5)PVCMDSFQPMDDSLIAFR;LHAVDEELAS(0.552)S(0.448)PVCMDSFQPMDDSLIAFR;LHAVDEELAS(0.554)S(0.446)PVCMDSFQPMDDSLIAFR 169.6 2.3211000000000001e-10 465697000.0 163564.0 195732.0 151187.1 169916.0 138901.0 189247.0 147892.0 174784.0 206972.0 160147.0 True False 154490.77886324984 186328.7409202785 160932.86237391297 186064.76555289165 149831.71846141852 188065.83927538965 162842.36664682796 174177.71509889243 169391.10213953131 158728.22217248057 0.9733037814496143 1.1738853895673707 1.01388940272409 1.172222324462918 0.9439513428091273 1.1848292427230087 1.0259194264135132 1.09733299292941 1.0671769633724242 1.0 17.27619913927265 -8.043878536757298 19.973649393389213 0.9999999976790404 1.076100275256481 0.06687623557197309 0.08092772291016882 1658.8002581728815 755094.3948626184 0.06952341582924876 0.017950868775342164 9.039022412572013e-09 8.043878536757298 0.07610027757744064 LHAVDEELASS(ph)PVCMDSFQPMDDSLIAFR ddPTM_KYSE-520_SHP099_60min_R1 1 LHAVDEELASSPVCMDSFQPMDDSLIAFR 29 0 Q3T8J9-3;Q3T8J9;A0A087WUE6;Q3T8J9-2;A4PB68 Q3T8J9-3 GON4L GON-4-like protein 1 LHAVDEELAS(0.138)S(0.862)PVCMDSFQPMDDSLIAFR 232.53 5.612899999999999e-31 187720000.0 52397.0 66091.0 50142.0 50018.0 44798.0 59646.0 45898.0 57724.0 67097.0 44665.0 True False 49490.43395917005 62915.88915538652 53374.233550036646 54771.695681539924 48323.34773424692 59273.72718943971 50537.81776131296 57523.76891688288 54913.87617772509 44269.3028488442 1.1179402153260285 1.4212080404837266 1.2056714272705147 1.2372387220227012 1.0915768856637544 1.3389351847673665 1.141599585018819 1.2994053489682351 1.2404504395568725 1.0 15.434019033662105 -10.403365055431335 3.7128395977755653 0.9985633172831121 1.2358150806493884 0.3420288943161337 0.09672428918743219 63168198.40663733 1531.333274322301 775855.2068251021 0.021944204728137736 3.950344259120863e-11 10.403365055431335 0.2372517633662763 LHDAFFK ddPTM_KYSE-520_SHP099_60min_R1 1 LHDAFFK 7 0 Q13435;E9PPJ0 Q13435 SF3B2 Splicing factor 3B subunit 2 0 91.9 0.011966 908530000.0 1793300.0 1571900.0 1052900.0 1023000.0 1790200.0 1596700.0 1139400.0 1348000.0 1218800.0 1293200.0 False True 1693822.0741450775 1496383.5645299968 1120771.6186995644 1120225.612423835 1931078.555155337 1586734.403034207 1254581.6714723962 1343324.1026255654 997496.6434477152 1281743.2540943746 1.3214987235036086 1.1674596763041112 0.8744119503803857 0.8739859631368522 1.5066032522400559 1.237950266533937 0.9788088741366776 1.0480446051379464 0.7782343618827969 1.0 20.289675874073072 -6.866770481406641 6.2065021591819995 0.9505879282970197 1.1526566870629298 0.23174199668686535 0.18927683298490242 0.38955444995645655 20.119633873833138 0.08691001025155044 0.05836778719892344 1.3590314860719835e-07 6.866770481406641 0.20206875876591013 LHDFGYR ddPTM_KYSE-520_SHP099_60min_R1 2 LHDFGYR 7 0 P43490;A0A0C4DFS8 P43490 NAMPT Nicotinamide phosphoribosyltransferase 0 ; 160.03 0.0010538 160230000.0 184783.0 164641.0 128612.0 110435.0 197000.0 188063.0 135326.0 148221.0 146565.0 153709.0 False True 174532.71863422167 156731.39922882075 136902.53530647577 120930.70919650662 212502.77922332773 186889.22905857218 149006.0727344859 147706.8559460416 119952.49060298206 152347.25784379235 1.1456242869377862 1.0287772910853679 0.8986215915146128 0.7937833007831466 1.394857920194502 1.2267318211279987 0.9780686232453735 0.9695406273573449 0.7873623214536233 1.0 17.217004007078437 -6.990311580765074 24.13335870891403 0.9218317575443626 1.074417900050565 0.16871484537257375 0.16406197360032618 279.35061373835606 695844.7122698958 0.07523831954565563 0.05064431766159286 1.022559102995609e-07 6.990311580765074 0.15258614250620228 LHELRIARLRQEER ddPTM_KYSE-520_SHP099_60min_R1 1 LHELRIARLRQEER 14 3 Q9BYN8 Q9BYN8 MRPS26 28S ribosomal protein S26, mitochondrial 0 81.431 0.024051 3037000000.0 1866200.0 1683900.0 1307900.0 1068200.0 1790300.0 1563900.0 1144900.0 1343600.0 1381500.0 1230200.0 False True 1762678.1658225316 1603002.9164145703 1392209.3267139907 1169721.4068339595 1931186.4245864141 1554139.1200007505 1260637.6651472242 1338939.365198599 1130654.424780949 1219301.3850811177 1.4456459964615427 1.3146896542793032 1.14180902584751 0.959337388726201 1.5838466585994537 1.274614413644217 1.033901610030039 1.098120105153101 0.927296924792494 1.0 20.2176233425506 -6.7657842425284676 6.495664739888423 1.021624374706804 1.280553965381871 0.40694676039624866 0.16064809778623731 0.1703971455904553 31.386037669758288 0.06866723528595631 0.04896587381575096 1.7148090129380196e-07 6.7657842425284676 0.25892959067506705 LHEVGHERDS(ph)LQR ddPTM_KYSE-520_SHP099_60min_R1 4 LHEVGHERDSLQR 13 1 A0A2R8Y7R9;Q13136-2;Q13136;E9PJZ7;A0A3B3ITS2;E9PID5;E9PPF6 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 LHEVGHERDS(1)LQR;LHEVGHERDS(1)LQR;LHEVGHERDS(1)LQR;LHEVGHERDS(1)LQR 170.79 3.9608000000000004e-07 1522560000.0 332810.7 334275.7 367135.2 368167.5 310831.8 336214.0 357418.0 346790.0 374104.0 298698.8 True False 314349.02702931745 318216.59361394483 390801.32242908934 403158.02850640536 335292.4942689831 334115.56371374906 393549.29950352863 345587.0664313941 306176.1439943916 296052.5610161498 1.061801411041229 1.0748651946185528 1.3200403370527538 1.3617785541953575 1.1325438061341164 1.1285683953111383 1.3293223951609738 1.1673165915039734 1.03419522176567 1.0 18.175493808350424 -7.753687777380315 3.7066102999862376 1.0053173332194003 1.2044427150862984 0.34173074678406146 0.10104325522874093 0.26385487871780783 7.308760711465013 0.09618784826879605 0.027945386190953207 1.763243220176017e-08 7.753687777380315 0.1991253818668981 LHFDS(ph)PPHLLDIYPR ddPTM_KYSE-520_SHP099_60min_R1 3 LHFDSPPHLLDIYPR 15 0 Q8IU52;Q8TC44-2;Q8TC44 Q8IU52 TUWD12;POC1B POC1 centriolar protein homolog B 1 LHFDS(1)PPHLLDIYPR;LHFDS(1)PPHLLDIYPR;LHFDS(1)PPHLLDIYPR 159.8 3.7857e-08 858957000.0 458116.0 475136.0 416676.0 448713.0 453905.0 444796.0 412527.0 428475.0 517640.0 366586.0 True False 432703.39224839496 452309.7533663243 443535.60166517185 491358.54860951734 489624.7411338303 442019.8631753015 454229.2550355386 426988.7202318164 423649.62464249687 363338.3332395927 1.1909103792884455 1.2448720985023676 1.2207233894385028 1.3523443679296714 1.3475724864157443 1.216551689534571 1.2501550579195577 1.1751821406365381 1.1659920957559236 1.0 18.47095405669788 -8.063850816648968 0.8667942111344988 1.0018952469599258 1.2679301642574088 0.7101540613407997 0.05089676824158845 0.3971655485456659 0.6671008171800086 0.05296865733872528 0.018730638083103792 8.632750381702343e-09 8.063850816648968 0.26603491729748296 LHFFMPGFAPLT(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 LHFFMPGFAPLTSR 14 0 P04350;Q9BUF5;K7ESM5;Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A075B736;Q5SQY0;A6NNZ2;P68371;Q3ZCM7 P04350;Q5JP53;P68371 TUBB4A;TUBB6;TUBB;TUBB2B;TUBB2A;TUBB8;TUBB4B Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-8 chain 1 LHFFMPGFAPLT(0.5)S(0.5)R 87.21600000000001 0.0099897 10395000.0 14430.0 21642.0 24255.0 18590.0 24896.0 18769.0 15592.0 14772.0 24597.0 15829.0 True False 13629.539134508155 20602.285834695722 25818.516109372136 20356.788010712688 26855.17356113692 18651.85570899294 17168.191523255733 14720.75937981072 20130.80483991096 15688.767374775645 0.8687450587368444 1.3131870300926265 1.6456688720417305 1.2975390305960093 1.7117452837190121 1.1888668665571103 1.0942983035658176 0.9382992958056547 1.2831348925650596 1.0 13.937444387549858 -6.5114446978661755 23.25069031511372 1.0834756777240495 1.3833831368387093 0.2625850355830808 0.22842720197202226 300.39522835573484 610846.9845258832 0.08452721081112387 0.07033219074802836 3.0800325213097675e-07 6.5114446978661755 0.29990745911465977 LHFFMPGFAPLTS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 LHFFMPGFAPLTSR 14 0 P04350;Q9BUF5;K7ESM5;Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A075B736;Q5SQY0;A6NNZ2;P68371;Q3ZCM7 P04350;Q5JP53;P68371 TUBB4A;TUBB6;TUBB;TUBB2B;TUBB2A;TUBB8;TUBB4B Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-8 chain 1 LHFFMPGFAPLT(0.317)S(0.683)R 67.994 0.019196 11696000.0 14946.0 18596.0 34883.0 13146.0 18747.0 15816.0 14065.0 13601.0 27710.0 14774.0 True False 14116.91558588766 17702.62024683493 37131.6139947734 14395.391887510972 20222.282244161044 15717.28647735268 15486.827461171877 13553.821305497264 22678.562512254863 14643.113853998067 0.9640651385110458 1.2089382369994695 2.5357730852195215 0.9830826988742248 1.3810096981961029 1.073356844320467 1.057618455718245 0.9256105935280022 1.5487527269388024 1.0 13.837934754485586 LHFFMPGFAPLTSR ddPTM_KYSE-520_SHP099_60min_R1 2 LHFFMPGFAPLTSR 14 0 P04350;Q9BUF5;K7ESM5;Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;A0A075B736;Q5SQY0;A6NNZ2;P68371;Q3ZCM7 P04350;Q5JP53;P68371 TUBB4A;TUBB6;TUBB;TUBB2B;TUBB2A;TUBB8;TUBB4B Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-8 chain-like protein LOC260334;Tubulin beta-4B chain;Tubulin beta-8 chain 0 ; 150.14 3.9444000000000004e-05 326610000.0 78703.0 114678.0 96646.0 89979.0 116690.0 145994.0 78126.0 82755.0 56228.0 55519.0 False True 74337.18769945916 109168.69674481265 102875.95579906738 98530.57710682714 125872.83912472159 145082.79729227527 86023.73851628258 82467.94222016215 46018.41259253215 55027.144853128426 1.350918494824158 1.9839062527447515 1.8695492210917177 1.7905813098210464 2.28746811161447 2.6365677826736627 1.563296419356054 1.4986774698246705 0.8362856680163716 1.0 15.747855854262642 -7.424555837313232 1.9995410959796136 0.93379985684841 1.977353433754615 0.5894147131478952 0.3362404069956372 0.2527533717251866 1.839580317478093 0.28613412320196724 0.10069940898701811 3.7622197823625454e-08 7.424555837313232 1.043553576906205 LHGELQDR ddPTM_KYSE-520_SHP099_60min_R1 4 LHGELQDR 8 0 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 0 ;;; 134.26 0.0012686 1503816000.0 783566.0 795263.0 483267.0 435788.0 713281.0 639477.0 573186.0 625149.0 591128.0 638224.0 False True 740100.0319799037 757057.3717659005 514419.1640745398 477205.1604955599 769412.1566862671 635485.7868410504 631129.2346362789 622980.5040298738 483794.0563242223 632569.8318907587 1.1699894536034638 1.196796517315799 0.8132211467261011 0.7543912726112595 1.2163276177532607 1.004609696516155 0.9977226273181985 0.984840681016636 0.7648073492189094 1.0 19.270865227858632 -4.74137128047504 24.982082119281678 0.9487733250792459 1.1833932251997696 0.3514459850848686 0.13091434961612392 283.18416477377184 352520.7831781273 0.03472568183694566 0.09161931550771282 1.8139642328173564e-05 4.74137128047504 0.2346199001205237 LHGGFDS(ph)DCS(ph)EDGEALNGEPELDLTSK ddPTM_KYSE-520_SHP099_60min_R1 6 LHGGFDSDCSEDGEALNGEPELDLTSK 27 0 O00178;F8WAZ4 O00178 GTPBP1 GTP-binding protein 1 2 LHGGFDS(1)DCS(1)EDGEALNGEPELDLTSK;LHGGFDS(1)DCS(1)EDGEALNGEPELDLTSK;LHGGFDS(1)DCS(1)EDGEALNGEPELDLTSK;LHGGFDS(1)DCS(1)EDGEALNGEPELDLTSK;LHGGFDS(1)DCS(1)EDGEALNGEPELDLTSK;LHGGFDS(1)DCS(1)EDGEALNGEPELDLTSK 262.14 4.72e-41 2975330000.0 1312790.0 1358040.0 1273050.0 1178810.0 1342830.0 1346080.0 1218000.0 1390620.0 1582470.0 1354270.0 True False 1239966.9217180146 1292797.7199404028 1355112.83995202 1290843.747977851 1448503.0813424434 1337678.6154169762 1341127.3265344708 1385796.263793149 1295133.338822372 1342272.2214061168 0.9237820033398808 0.9631412312072686 1.0095663296469413 0.9616855116211886 1.0791425600874336 0.9965777389147422 0.9991470471835834 1.0324256448825544 0.9648812797940765 1.0 20.356245858332915 -4.3456015085555775 1.3058261643507543 1.0090965369540221 0.8930424005571452 0.40334975901495984 0.03166297551753591 1.1205549758521745 1.8897878829373291 0.009123403374525073 0.16683980280043106 4.5123054595730526e-05 4.3456015085555775 -0.1160541363968769 LHGS(ph)VPNLSR ddPTM_KYSE-520_SHP099_60min_R1 2 LHGSVPNLSR 10 0 J3QLK7;Q9BZF2-2;Q9BZF2 J3QLK7 OSBPL7 Oxysterol-binding protein-related protein 7 1 LHGS(1)VPNLSR;LHGS(1)VPNLSR 108.97 0.00051306 779810000.0 292790.0 290460.0 240350.0 293570.0 246680.0 223340.0 223480.0 262150.0 297710.0 244550.0 True False 276548.3550376053 276505.86561065173 255843.3455735971 321470.80453496083 266092.31258279475 221946.05221623363 246071.53935461736 261240.66283627017 243653.3686583685 242383.4772570208 1.1409538231203624 1.1407785247566522 1.0555312947437567 1.3262900927610535 1.0978153939950015 0.9156814430089409 1.015215814787927 1.0777989729029813 1.0052391830322704 1.0 17.886931831284777 -6.005473134648311 24.988576086214223 1.0082398714118554 1.1631922804625558 0.5297699915088883 0.07260840469163815 205.03747167633935 936140.6862490205 0.02304093645803777 0.025380084055586512 9.874767189287285e-07 6.005473134648311 0.1549524090507004 LHIACFPVQLDTLS(ph)DGASVDES(ph)HGISPPLQGEISQTQENSK ddPTM_KYSE-520_SHP099_60min_R1 1 LHIACFPVQLDTLSDGASVDESHGISPPLQGEISQTQENSK 41 0 E9PG22;Q8IW35;Q8IW35-2 E9PG22 CEP97 Centrosomal protein of 97 kDa 2 LHIACFPVQLDTLS(0.996)DGAS(0.052)VDES(0.934)HGIS(0.019)PPLQGEISQTQENSK 257.94 6.1587e-42 194550000.0 30379.0 37346.0 33975.0 40408.0 27696.0 37882.0 24561.0 32971.0 42383.0 32885.0 True False 28693.816310964892 35551.842102511175 36165.08286192203 44248.364170891786 29875.517631316172 37645.564386385595 27043.865572260416 32856.631296489264 34687.315588484205 32593.664484142853 0.880349502429367 1.0907592829829706 1.109574005694165 1.3575756169552233 0.9166050551281496 1.154996376817358 0.8297276786848417 1.0080680345861186 1.0642349099887167 1.0 14.992303941994052 LHIACFPVQLDTLSDGASVDESHGIS(ph)PPLQGEISQTQENSK ddPTM_KYSE-520_SHP099_60min_R1 1 LHIACFPVQLDTLSDGASVDESHGISPPLQGEISQTQENSK 41 0 E9PG22;Q8IW35;Q8IW35-2 E9PG22 CEP97 Centrosomal protein of 97 kDa 1 LHIACFPVQLDTLSDGASVDES(0.021)HGIS(0.979)PPLQGEISQTQENSK 396.79 5.483099999999999e-115 275660000.0 31486.0 70132.0 50221.0 60870.0 39205.0 50713.0 46508.0 46829.0 69456.0 51131.0 True False 29739.40881421509 66762.75344972186 53458.32601644111 66655.06649876724 42290.21045406379 50396.481355967786 51209.48251433929 46666.56112897077 56844.54124327583 50678.01911931603 0.586830529902852 1.3173907467167576 1.0548621857255143 1.3152658224828193 0.8344882295911363 0.9944445783745929 1.0104870593653628 0.920844222800013 1.1216804095961481 1.0 15.629072513685019 -5.7999014699528955 24.99997884919772 0.9785806642880563 1.0853804631617503 0.04178537623672374 0.2006145299982801 496.65371286461453 322817.4805364064 0.05956005686951188 0.06753609413964774 1.5852528040219754e-06 5.7999014699528955 0.10679979887369395 LHKTEDGGWEWS(ph)DDEFDEESEEGK ddPTM_KYSE-520_SHP099_60min_R1 16 LHKTEDGGWEWSDDEFDEESEEGK 24 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 LHKTEDGGWEWS(1)DDEFDEESEEGK;LHKT(0.14)EDGGWEWS(0.86)DDEFDEESEEGK;LHKT(0.029)EDGGWEWS(0.971)DDEFDEESEEGK;LHKT(0.004)EDGGWEWS(0.996)DDEFDEESEEGK;LHKT(0.001)EDGGWEWS(0.999)DDEFDEESEEGK;LHKTEDGGWEWS(1)DDEFDEESEEGK;LHKTEDGGWEWS(1)DDEFDEESEEGK;LHKT(0.048)EDGGWEWS(0.952)DDEFDEESEEGK;LHKTEDGGWEWS(1)DDEFDEESEEGK;LHKTEDGGWEWS(1)DDEFDEESEEGK;LHKTEDGGWEWS(1)DDEFDEESEEGK;LHKTEDGGWEWS(1)DDEFDEESEEGK;LHKTEDGGWEWS(1)DDEFDEESEEGK;LHKTEDGGWEWS(1)DDEFDEESEEGK;LHKT(0.013)EDGGWEWS(0.987)DDEFDEESEEGK;LHKTEDGGWEWS(1)DDEFDEESEEGK 338.33 9.507399999999998e-73 34395580000.0 10521033.0 13409230.0 12323650.0 13398211.0 11169480.0 10463658.0 10361297.0 10287536.0 14994450.0 9249939.0 True False 9937410.326330697 12765030.46313544 13118052.197537163 14671572.945120962 12048454.53035216 10398350.42912514 11408718.017273936 10251850.938744945 12271835.859324431 9167991.736803647 1.0839244418642224 1.3923475096396492 1.4308534054275528 1.600303901477566 1.3141868880602596 1.1342015490025352 1.2444075370918148 1.1182220962951237 1.3385522382247386 1.0 23.1281743131051 -6.071513495771347 5.5027264248412795 1.181734637945494 1.3903844352509882 0.32081698948014836 0.14417893695494705 0.274593790554205 15.318731040204405 0.048132368380050194 0.0487376080290745 8.481770248044878e-07 6.071513495771347 0.20864979730549416 LHKTEDGGWEWS(ph)DDEFDEESEEGKAAISQLR ddPTM_KYSE-520_SHP099_60min_R1 3 LHKTEDGGWEWSDDEFDEESEEGKAAISQLR 31 2 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 LHKTEDGGWEWS(1)DDEFDEESEEGKAAISQLR;LHKTEDGGWEWS(1)DDEFDEESEEGKAAISQLR;LHKTEDGGWEWS(1)DDEFDEESEEGKAAISQLR 305.8 5.5933999999999986e-55 2644260000.0 605497.0 946310.0 977068.0 711720.0 678553.0 586427.0 409939.0 526289.0 1235380.0 517256.0 True False 571908.8743816554 900847.8471597321 1040051.3666440748 779361.6548135795 731951.2606615579 582766.8915689489 451379.6347390923 524463.4262957755 1011066.1333955022 512673.5142590787 1.1155420720498586 1.7571569860823553 2.028681680868902 1.5201909853679907 1.4277142085628935 1.1367212765246315 0.880442664161091 1.0229969204743015 1.9721442697438853 1.0 18.967680841580858 -5.929864376164515 2.515211680232827 1.187627668853089 1.652269531292393 0.22384794066758695 0.3508254347473774 0.4113044829018077 5.283167633814413 0.12299294337247611 0.1401598365813978 1.175264515613348e-06 5.929864376164515 0.46464186243930405 LHLS(ph)PPLGR ddPTM_KYSE-520_SHP099_60min_R1 3 LHLSPPLGR 9 0 Q6P0Q8;A0A669KBJ4 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 LHLS(1)PPLGR;LHLS(1)PPLGR;LHLS(1)PPLGR 108.35 0.00076087 1801650000.0 558290.0 482900.0 494950.0 447590.0 495980.0 503420.0 463240.0 522040.0 574600.0 492730.0 True False 527320.5407764767 459700.75915232295 526855.2689480006 490128.8190271597 535010.8042598282 500277.96904583264 510068.81998672284 520229.1650850513 470267.1244872477 488364.79553813976 1.0797677178909073 0.9413060960828855 1.0788150041967037 1.0036121020702897 1.0955146831791758 1.0243940054986262 1.0444422379476943 1.0652470649769084 0.9629423103052508 1.0 18.897599679813094 -7.765729450297887 24.999874493946567 0.9814711425024739 1.039579362830379 0.23414050009040055 0.04339849487804084 162.98373364438064 949706.7412127589 0.03470405621008208 0.010226984461452418 1.715025373361796e-08 7.765729450297887 0.05810822032790519 LHLS(ph)PVGIPGSAR ddPTM_KYSE-520_SHP099_60min_R1 1 LHLSPVGIPGSAR 13 0 C9J7S4;C9JVL3;Q9H7P9-2;Q9H7P9-3;Q9H7P9 C9J7S4 PLEKHG2 Pleckstrin homology domain-containing family G member 2 1 LHLS(1)PVGIPGSAR 81.656 0.005183600000000001 122070000.0 92123.0 84460.0 77555.0 73717.0 73591.0 96058.0 80346.0 83085.0 103340.0 98410.0 True False 87012.75354735243 80402.41482295537 82554.31939238746 80723.04151617573 79382.19302448699 95458.466391094 88468.15778139472 82796.79752718472 84576.06098940506 97538.1639618215 0.8920893116402219 0.8243174933498499 0.846379673752122 0.8276046855646415 0.8138577742303911 0.9786781144297371 0.9070106939476842 0.8488656559046277 0.8671073716592607 1.0 16.57367919518645 -6.236837963423821 24.9838949984467 0.9100538791403198 0.8395027020465808 0.4068792406488507 0.047159004942168 904.4032422197807 918464.6648003488 0.015753758637173577 0.015747081553282364 5.796449233495512e-07 6.236837963423821 -0.07055117709373893 LHNGNAS(ph)PPRVPS(ph)PPPAPEPPWHCGDR ddPTM_KYSE-520_SHP099_60min_R1 4 LHNGNASPPRVPSPPPAPEPPWHCGDR 27 1 O15037 O15037 KHNYN Protein KHNYN 2 LHNGNAS(1)PPRVPS(1)PPPAPEPPWHCGDR;LHNGNAS(1)PPRVPS(1)PPPAPEPPWHCGDR;LHNGNAS(1)PPRVPS(1)PPPAPEPPWHCGDR;LHNGNAS(1)PPRVPS(1)PPPAPEPPWHCGDR 85.697 0.0098339 3562440000.0 675060.0 806210.0 616700.0 621720.0 682190.0 694160.0 581180.0 628150.0 876180.0 671680.0 True False 637613.0761012527 767478.4614541185 656453.4687548882 680808.0818730657 735874.4718698573 689827.4899544222 639931.3461702013 625971.0942613122 717087.7987003775 665729.4377591324 0.9577660832416841 1.1528384023958393 0.986066458116277 1.0226498082534679 1.1053656788061461 1.0361979669644845 0.9612483839143898 0.9402785257151192 1.0771459965990373 1.0 19.34457643835178 -6.618687236633597 6.7699161535452745 0.9900782468090826 1.0487473577411717 0.12889734332386948 0.061588199045145745 0.39473228715649045 23.787400720459125 0.02283259730240761 0.017605846121595492 2.406094959820806e-07 6.618687236633597 0.05866911093208904 LHPDGS(ph)PDVAGEK ddPTM_KYSE-520_SHP099_60min_R1 2 LHPDGSPDVAGEK 13 0 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 1 LHPDGS(1)PDVAGEK;LHPDGS(1)PDVAGEK 151.54 5.4013e-06 909290000.0 1025680.0 1096850.0 892310.0 930390.0 1021870.0 974410.0 915970.0 975090.0 1069880.0 984710.0 True False 968783.4857576103 1044155.679594585 949829.7303464783 1018813.9858680454 1102285.3553550357 968328.3457509624 1008565.1866057315 971707.6403777158 875616.7614800154 975986.2354927865 0.9926200293884888 1.0698467269544831 0.9731999241432934 1.043881510637939 1.129406660943819 0.9921536908377017 1.0333805436267198 0.9956161317040395 0.8971609738306469 1.0 19.896501275784065 -7.522356125367094 4.863945549230302 0.9466735702911376 1.034145567336273 0.3325135589667757 0.04796983510570914 0.19542927808323743 13.220453512724342 0.03133133673074616 0.01234687473272625 3.003612303509849e-08 7.522356125367094 0.08747199704513531 LHPFHVIR ddPTM_KYSE-520_SHP099_60min_R1 2 LHPFHVIR 8 0 X1WI28;P27635;F8W7C6;A0A087WV22;B8A6G2;A6QRI9;H7C123;H7C2C5;Q96L21;H7C2U2 X1WI28 RPL10;RPL10L 60S ribosomal protein L10;60S ribosomal protein L10-like 0 ; 162.07 0.00035237 1371010000.0 1106100.0 888960.0 840090.0 740390.0 1319650.0 943570.0 830930.0 797670.0 831810.0 573050.0 False True 1044742.428044315 846253.0272438367 894243.5455915246 810756.4429936303 1423498.947218603 937680.8296304796 914928.5134953114 794903.0689475772 680774.2722237002 567973.222826153 1.8394219763492141 1.489952330909199 1.574446663421732 1.4274553982658247 2.5062782715978704 1.6509243604209274 1.6108655773290839 1.3995432126047314 1.1986027595390243 1.0 19.11546338971863 -7.565239420590712 1.4101211617977802 1.0259179652614245 1.7418316403731287 0.4595747788112835 0.28243594911916237 0.40427181075238366 1.4514161938400145 0.2698745037205649 0.08839097727386948 2.7212007338547103e-08 7.565239420590712 0.7159136751117041 LHPPS(ph)PVPQGVCPAHR ddPTM_KYSE-520_SHP099_60min_R1 9 LHPPSPVPQGVCPAHR 16 0 Q96F44-2;Q96F44-3;Q96F44 Q96F44-2 TRIM11 E3 ubiquitin-protein ligase TRIM11 1 LHPPS(1)PVPQGVCPAHR;LHPPS(1)PVPQGVCPAHR;LHPPS(1)PVPQGVCPAHR;LHPPS(1)PVPQGVCPAHR;LHPPS(1)PVPQGVCPAHR;LHPPS(1)PVPQGVCPAHR;LHPPS(1)PVPQGVCPAHR;LHPPS(1)PVPQGVCPAHR;LHPPS(1)PVPQGVCPAHR 121.77 0.00021329 24525030000.0 3636310.0 2901540.0 2776250.0 2877300.0 2901030.0 3268520.0 3039160.0 3138890.0 3434650.0 3210100.0 True False 3434596.6354957283 2762145.6630996685 2955211.517157057 3150757.7269082083 3129324.5563972085 3248119.954284064 3346387.9521432705 3128001.9232124337 2811004.140480554 3181661.011420009 1.0794979801958322 0.8681458059753806 0.9288266432375567 0.990287059369028 0.9835505873080292 1.020888128127262 1.0517738816712412 0.983134882058467 0.8835020859830611 1.0 21.601348701914716 -4.185924274261769 22.017797348204134 0.971524650984381 1.0795066002184341 0.26642536944843176 0.05529671259904895 86171.23547459683 25117668.6476898 0.014639048208827022 131.59152453630054 6.517420251234558e-05 4.185924274261769 0.10798194923405313 LHPPS(ph)PVPQGVCPAHREPLAAFCGDELR ddPTM_KYSE-520_SHP099_60min_R1 5 LHPPSPVPQGVCPAHREPLAAFCGDELR 28 1 Q96F44-2;Q96F44-3;Q96F44 Q96F44-2 TRIM11 E3 ubiquitin-protein ligase TRIM11 1 LHPPS(1)PVPQGVCPAHREPLAAFCGDELR;LHPPS(1)PVPQGVCPAHREPLAAFCGDELR;LHPPS(1)PVPQGVCPAHREPLAAFCGDELR;LHPPS(1)PVPQGVCPAHREPLAAFCGDELR;LHPPS(1)PVPQGVCPAHREPLAAFCGDELR 214.03 1.8721e-22 5125260000.0 719205.0 689134.0 692637.0 578178.0 607643.0 639996.0 528033.0 593142.0 801265.0 554879.0 True False 679309.264950377 656026.9682287778 737285.4892783836 633127.8632844457 655461.047084267 636001.5475695379 581411.7287454655 591084.5288423841 655775.4742469105 549963.2037493292 1.2351903915011797 1.1928561106567994 1.3406087611898396 1.1512185887494804 1.1918270942777898 1.1564438188476052 1.057182962026802 1.0747710479768713 1.1923988182776863 1.0 19.068975570266428 -6.135648479322543 1.088129691843735 1.0857876104637276 1.2444814450479067 0.5374274759194221 0.06268052072652616 0.40203295095737823 1.0027825076173535 0.03142951771167282 0.032033386374780946 7.317311116064569e-07 6.135648479322543 0.15869383458417907 LHQLAMQQSHFPMTHGNTGFSGIESSS(ph)PEVK ddPTM_KYSE-520_SHP099_60min_R1 4 LHQLAMQQSHFPMTHGNTGFSGIESSSPEVK 31 0 Q15366;Q15366-2;Q15366-6;Q15366-3;Q15366-5;F8VRH0;Q15366-4;H3BRU6;F8VZX2 Q15366;H3BRU6 PCBP2 Poly(rC)-binding protein 2 1 LHQLAMQQSHFPMTHGNTGFSGIESS(0.165)S(0.834)PEVK;LHQLAMQQSHFPMTHGNTGFSGIES(0.16)S(0.16)S(0.68)PEVK;LHQLAMQQSHFPMTHGNTGFSGIES(0.008)S(0.248)S(0.744)PEVK;LHQLAMQQSHFPMTHGNTGFSGIES(0.03)S(0.155)S(0.816)PEVK 214.97 4.1266999999999997e-22 10912430000.0 1328223.0 2090990.0 1677620.0 4142670.0 1759380.0 1361217.0 2348830.0 1605090.0 2021280.0 1677080.0 True False 1254543.8224430925 1990535.7017600206 1785762.0694869051 4536388.111260852 1897833.196497149 1352721.1397851922 2586272.6587717277 1599522.3174208233 1654266.504322283 1662222.3759484969 0.7547388608141105 1.1975146830905712 1.0743220012712884 2.7291102423478684 1.1417444644939327 0.8138027494746621 1.5559125518906274 0.9622793800427 0.9952137140365024 1.0 20.664681971418645 -5.971109404047172 24.999901019797164 1.0808519817973803 1.4631088268959491 0.1058006252841669 0.5148952605809478 511.5157557774902 442627.77372627665 0.1660590142471427 0.18829070768853667 1.0687856052510574e-06 5.971109404047172 0.38225684509856883 LHQLHTPATAADES(ph)PAS(ph)EGEEEELLMEEEEEDVLAGVSAEDK ddPTM_KYSE-520_SHP099_60min_R1 1 LHQLHTPATAADESPASEGEEEELLMEEEEEDVLAGVSAEDK 42 0 M0R044;M0R0F2;W4VSR2;M0R189;Q8N594-2;Q8N594 M0R044 MPND MPN domain-containing protein 2 LHQLHT(0.143)PAT(0.538)AADES(0.559)PAS(0.76)EGEEEELLMEEEEEDVLAGVSAEDK 57.37 0.023837 29058000.0 7933.6 11906.0 8817.0 12688.0 10087.0 11258.0 12246.0 11959.0 13053.0 12885.0 True False 7493.5073927604935 11334.017888729662 9385.357927698791 13893.863705213707 10880.789512820857 11187.734646056939 13483.945189442647 11917.517020251584 10682.904239352669 12770.848924378313 0.5867665835789596 0.8874913450032378 0.7349047806667771 1.0879357971803791 0.8520020538376649 0.8760368799524859 1.0558378122932064 0.9331812701583369 0.8365069779315955 1.0 13.640566808919246 -3.7135033572257408 0.9445404029364423 0.9383672179102621 3.9121390603665196e-16 0.5185283929087183 0.0983535462715744 4.1611754303903 1.4317789455355543 0.03140215569762757 5.1056787969417154 0.000193417890678226 3.7135033572257408 -0.9383672179102617 LHQLS(ph)GSDQLESTAHSR ddPTM_KYSE-520_SHP099_60min_R1 1 LHQLSGSDQLESTAHSR 17 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 LHQLS(0.886)GS(0.114)DQLESTAHSR 143.74 6.3708e-06 585590000.0 75532.0 144820.0 168490.0 259380.0 128830.0 124440.0 78017.0 79616.0 137110.0 117460.0 True False 71342.08939069095 137862.62982074826 179351.1349935318 284031.3972145597 138968.1880575703 123663.3238013257 85903.719732545 79339.83067851403 112214.28026182842 116419.3957824973 0.6128024364941486 1.1841895321146716 1.5405606066587727 2.4397257459161414 1.1936858727320678 1.062222690387107 0.7378815115398487 0.681500106964497 0.9638795967595883 1.0 16.828971909557055 -6.293511918709638 2.9117404958236466 0.8354385196048251 1.4594688825707987 0.2603205748263716 0.4352437049192677 0.37525315545271126 6.3846424025486215 0.17620111463360852 0.16008613396183957 5.087308579232451e-07 6.293511918709638 0.6240303629659736 LHQLSGS(ph)DQLESTAHSR ddPTM_KYSE-520_SHP099_60min_R1 1 LHQLSGSDQLESTAHSR 17 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 LHQLS(0.218)GS(0.782)DQLESTAHSR 142.99 0.00037945 0.0 55989.0 87579.0 102340.0 139110.0 100970.0 84827.0 61331.0 60460.0 88256.0 59074.0 True False 52883.1785586956 83371.57338124089 108937.00014978946 152330.97257505328 108915.76455928625 84297.56322802202 67530.93601287837 60250.27837147007 72230.93515270887 58550.650318876535 0.9032039485588129 1.4239222438552859 1.86056003744622 2.6016956557345408 1.8601973499203335 1.4397374370553278 1.153376361237556 1.0290283377441083 1.2336487256644844 1.0 15.837397574299985 -6.565799821413798 2.962294319547898 1.1040431816634495 1.7645309259968982 0.3476117193696622 0.4020316053827981 0.32916230350698805 5.90170711003597 0.18504786269285908 0.14249786615167884 2.7176916409838324e-07 6.565799821413798 0.6604877443334487 LHS(ph)PQTHWK ddPTM_KYSE-520_SHP099_60min_R1 3 LHSPQTHWK 9 0 Q9H8Y5;B8ZZS4 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 LHS(0.982)PQT(0.018)HWK;LHS(1)PQTHWK;LHS(0.998)PQT(0.002)HWK 166.7 0.00017278 4909900000.0 4996770.0 4668130.0 4799590.0 4946670.0 5207770.0 5061060.0 4668610.0 5269080.0 6491030.0 4778940.0 True False 4719589.207285953 4443866.02779402 5108979.251015524 5416800.029529439 5617591.870841984 5029472.047235118 5140558.660042775 5250802.791292522 5312422.577550406 4736602.309559054 0.9964081632441959 0.9381969896070322 1.0786168897281005 1.14360456620934 1.1859961009403266 1.061831185844971 1.0852839913683459 1.1085589306697223 1.1215682107888338 1.0 22.17542111603502 -4.8605816590490685 5.078521897653052 1.1069161262374447 0.9681202083313792 0.5367757427572828 0.0486244672470706 0.13682454736118926 5.608265502470216 0.012663874902127085 0.02779118519972455 1.3785367265990809e-05 4.8605816590490685 -0.1387959179060655 LHS(ph)SNPNLSTLDFGEEK ddPTM_KYSE-520_SHP099_60min_R1 8 LHSSNPNLSTLDFGEEK 17 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5;Q9H4L5-6 OSBPL3 Oxysterol-binding protein-related protein 3 1 LHS(0.5)S(0.5)NPNLSTLDFGEEK;LHS(0.5)S(0.5)NPNLSTLDFGEEK;LHS(0.499)S(0.499)NPNLS(0.001)T(0.002)LDFGEEK;LHS(0.441)S(0.441)NPNLS(0.054)T(0.065)LDFGEEK;LHS(0.496)S(0.496)NPNLS(0.004)T(0.005)LDFGEEK;LHS(0.5)S(0.5)NPNLSTLDFGEEK;LHS(0.49)S(0.49)NPNLS(0.007)T(0.012)LDFGEEK;LHS(0.608)S(0.392)NPNLSTLDFGEEK 306.88 2.494e-47 27758597000.0 7430292.0 7822151.0 7192911.0 9339547.0 8237017.0 7616614.0 7614407.0 7715892.0 9352634.0 7259090.0 True False 7018118.89084011 7446363.124671978 7656577.55212452 10227174.738842793 8885223.375684248 7569075.886786484 8384145.569010974 7689127.37155474 7654431.426316855 7194780.110086555 0.975445918215238 1.034967436215698 1.0641850668084434 1.4214714810401283 1.2349541250368188 1.0520232405956638 1.165309493928385 1.0687091549573762 1.063886777524431 1.0 22.77851916470735 -7.710519466102345 1.2682940975773966 1.0052561247174656 1.1421611280939372 0.11662071655957595 0.11917519984185575 1.0176950287282727 3.2333050276486186 0.12280297402036155 0.03963926475851243 1.9475137558290935e-08 7.710519466102345 0.1369050033764716 LHS(ph)SSLELGPRPLEQENER ddPTM_KYSE-520_SHP099_60min_R1 1 LHSSSLELGPRPLEQENER 19 1 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 LHS(0.514)S(0.435)S(0.051)LELGPRPLEQENER 113.99 2.7961999999999998e-05 378270000.0 50235.0 44798.0 45926.0 54046.0 57227.0 60994.0 43433.0 52293.0 70343.0 59720.0 True False 47448.364409010224 42645.83683683112 48886.46344419809 59182.51559047759 61730.4393229106 60613.3138214245 47823.631505231315 52111.60778827796 57570.48440272617 59190.92726145692 0.8016154942027232 0.7204792830572974 0.8259114311262237 0.9998578891838917 1.0429037384434983 1.0240304828083642 0.8079554370551719 0.8803985711879738 0.972623458801837 1.0 15.853088437194167 -5.084524072791254 4.27831180713976 0.9551110160269897 0.7625235298533254 0.5918731015228372 0.06902201328341775 0.1701918777815358 5.6006568088632624 0.02117883884470811 0.03938252853428656 8.23144209061195e-06 5.084524072791254 -0.19258748617366428 LHSFLGDDVFLR ddPTM_KYSE-520_SHP099_60min_R1 3 LHSFLGDDVFLR 12 0 E9PK47;P06737-2;P06737 E9PK47 PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form 0 ;; 218.62 1.3885e-10 2877211000.0 1005443.0 1018529.0 626988.0 546055.0 1107409.0 984344.0 697459.0 671531.0 730821.0 660461.0 False True 949669.0724890699 969597.3379968023 667404.6496962691 597951.9030225773 1194555.788004701 978200.3439721325 767964.9622638805 669201.6156975144 598122.3288981817 654609.8293708825 1.450740624230706 1.4811835913442375 1.0195457198338789 0.9134477916368035 1.8248363137973922 1.4943257801555456 1.1731644222359734 1.0222908145767615 0.9137081388970457 1.0 19.320275739939195 -7.096789960762555 3.0828396284742183 0.9735145483776257 1.3532214788190808 0.33691723157419473 0.24146725623207227 0.35263787708727284 6.384403436653573 0.139890143006162 0.0752962418823045 8.00221174977045e-08 7.096789960762555 0.3797069304414551 LHSHDVR ddPTM_KYSE-520_SHP099_60min_R1 2 LHSHDVR 7 0 K7ELI9;Q99470 K7ELI9 SDF2 Stromal cell-derived factor 2 0 ; 121.29 0.004193 434300000.0 325390.0 326150.0 176902.0 170843.0 368090.0 349910.0 232450.0 268670.0 280850.0 265950.0 False True 307339.96805111645 310481.2644388696 188305.38597320762 187079.8673541791 397056.5888543898 347726.081897476 255948.3144933811 267738.04647804913 229854.7196523556 263593.8899059693 1.1659601372427582 1.1778773193476761 0.7143769001640401 0.7097276322334909 1.5063193953244896 1.319173528724504 0.9709948686014096 1.0157217474713018 0.8720032157587213 1.0 18.007957403566834 -6.948095274624725 24.9981252826032 0.9649844106198427 1.090782287860637 0.0738946662259119 0.23181898945676205 351.28413038706515 169182.66168663735 0.10800157256974928 0.07281463213961585 1.1269502010523106e-07 6.948095274624725 0.12579787724079428 LHSS(ph)NPNLSTLDFGEEK ddPTM_KYSE-520_SHP099_60min_R1 10 LHSSNPNLSTLDFGEEK 17 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5;Q9H4L5-6 OSBPL3 Oxysterol-binding protein-related protein 3 1 LHS(0.056)S(0.944)NPNLSTLDFGEEK;LHS(0.004)S(0.996)NPNLSTLDFGEEK;LHS(0.014)S(0.986)NPNLSTLDFGEEK;LHS(0.11)S(0.886)NPNLS(0.002)T(0.002)LDFGEEK;LHS(0.267)S(0.733)NPNLSTLDFGEEK;LHS(0.002)S(0.998)NPNLSTLDFGEEK;LHS(0.006)S(0.994)NPNLSTLDFGEEK;LHS(0.107)S(0.893)NPNLSTLDFGEEK;LHS(0.134)S(0.845)NPNLS(0.011)T(0.011)LDFGEEK;LHSS(0.999)NPNLSTLDFGEEK 370.13 3.6620999999999997e-72 37557400000.0 11982150.0 11799750.0 10193640.0 12853050.0 11448680.0 10590850.0 11136430.0 11152200.0 13784110.0 10388090.0 True False 11317476.253676146 11232872.298214164 10850738.344800673 14074600.007589621 12349625.981921475 10524748.576673653 12262209.025483001 11113515.621143037 11281263.093135964 10296059.604411729 1.0992046169611094 1.090987497139296 1.0538729146586596 1.3669889791196272 1.1994516792258876 1.0222113100592323 1.1909613479926633 1.0793950353959723 1.0956874305877258 1.0 23.295588974741793 -8.030067652144036 0.8486799375720533 1.001450934416303 1.1494097307113629 0.18783467198844472 0.09199369087392059 1.2225276384951163 1.9892844745616982 0.09344152809642414 0.033531839772157075 9.331089346002862e-09 8.030067652144036 0.14795879629505992 LHSS(ph)SLELGPRPLEQENER ddPTM_KYSE-520_SHP099_60min_R1 2 LHSSSLELGPRPLEQENER 19 1 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 LHS(0.193)S(0.64)S(0.167)LELGPRPLEQENER;LHS(0.002)S(0.983)S(0.015)LELGPRPLEQENER 190.37 5.4365e-13 1006780000.0 160080.0 201814.0 158388.0 182337.0 139149.0 146286.0 137909.0 172868.0 226168.0 194905.0 True False 151200.0432884316 192118.5525110104 168597.94390976036 199666.25365838208 150099.23465049165 145372.9748119636 151850.18758213677 172268.36125569433 185101.5924313122 193178.2933337953 0.7826968583223326 0.9945141827039865 0.8727582224698391 1.0335853486052708 0.776998450810067 0.7525326593540803 0.7860623725448949 0.8917583765895973 0.9581904324595762 1.0 17.559573467890758 -7.799078927577141 2.9243476369437027 0.9951589137899253 0.8615141483730439 0.2306966330977973 0.08871927666156021 0.4099332770739658 6.616478609719989 0.08832961318834537 0.024603096798886535 1.5882580763746182e-08 7.799078927577141 -0.13364476541688142 LHSYS(ph)SPSTK ddPTM_KYSE-520_SHP099_60min_R1 4 LHSYSSPSTK 10 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LHSYS(0.938)S(0.061)PS(0.002)TK;LHS(0.057)YS(0.49)S(0.382)PS(0.065)T(0.007)K;LHSYS(0.754)S(0.129)PS(0.058)T(0.058)K;LHSYS(0.975)S(0.025)PSTK 244.64 9.4303e-14 6512400000.0 7918100.0 8734000.0 8161800.0 12019400.0 7472400.0 7070330.0 7681300.0 7242200.0 9185900.0 6855900.0 True False 7478867.20865898 8314405.529998728 8687922.687341733 13161720.162235612 8060435.3678598665 7026201.4478642475 8457800.766263736 7217078.498542185 7517972.117694761 6795162.059809486 1.1006164595975305 1.2235772240333935 1.2785453254642927 1.9369251309077127 1.1862020797905524 1.0340005707032744 1.2446797724351646 1.062090710275794 1.1063712758464423 1.0 22.69607652798357 -5.98424762508249 24.99996351921298 1.1037998756969074 1.3902650940626227 0.2964803442758447 0.2145319204928795 332.58228169083753 527825.1474368357 0.06972944580496857 0.0790428467279252 1.0369370087435882e-06 5.98424762508249 0.28646521836571526 LHSYSS(ph)PSTK ddPTM_KYSE-520_SHP099_60min_R1 2 LHSYSSPSTK 10 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LHSYS(0.178)S(0.806)PS(0.015)TK;LHSYS(0.114)S(0.886)PSTK 206.36 2.5902e-07 4235700000.0 6072600.0 6873700.0 6216300.0 8703400.0 6070200.0 5817200.0 5983400.0 5816800.0 7200500.0 5547200.0 True False 5735740.772572014 6543477.134365947 6617012.64443167 9530568.519227378 6547890.20528652 5780892.697019223 6588260.464356618 5796622.878451321 5893070.70983368 5498056.12365629 1.0432306698167462 1.1901437502995944 1.2035185701289746 1.7334432942982414 1.1909464105164635 1.051443013130765 1.198289052745305 1.054304057303162 1.0718462266104878 1.0 22.39049020314982 -5.998346157409764 24.998960266099218 1.0901460543899484 1.3018162631795802 0.25837526903014096 0.172696342390363 83.86522285601616 1267640.0387795614 0.05663108405286234 0.063759211388595 1.0038153733706733e-06 5.998346157409764 0.21167020878963183 LHTDDELNWLDHGR ddPTM_KYSE-520_SHP099_60min_R1 10 LHTDDELNWLDHGR 14 0 Q9Y490 Q9Y490 TLN1 Talin-1 0 ;;;;;;;;; 278.97 1.5745000000000001e-25 7837100000.0 2323020.0 2019048.0 1354713.0 1390554.0 2125870.0 1972672.0 1565773.0 1673882.0 1590705.0 1537659.0 False True 2194157.4497744385 1922049.9034271673 1442039.9675974369 1522711.8340746933 2293163.8744542925 1960359.822322475 1724056.615311874 1668075.6940289957 1301873.0704098293 1524036.5375405983 1.4397013429318712 1.2611573647235912 0.946197766311113 0.999130792843036 1.5046646310428142 1.2862945041238905 1.1312436236561996 1.0945116163165218 0.8542269416392841 1.0 20.53946606001417 -7.406859688082407 2.140218223120182 0.9337069105903282 1.2240161635224203 0.3336675848368772 0.16695633655016634 0.43964585885234836 3.7103653752615218 0.14145661828125955 0.051192583230636586 3.9186846157165616e-08 7.406859688082407 0.2903092529320921 LHTGEKPYK ddPTM_KYSE-520_SHP099_60min_R1 2 LHTGEKPYK 9 1 A6NHJ4;Q9P0L1 A6NHJ4 ZNF860;ZKSCAN7 Zinc finger protein 860;Zinc finger protein with KRAB and SCAN domains 7 0 ; 173.37 6.4906e-05 1473460000.0 4288500.0 4445700.0 2687990.0 5197200.0 4193200.0 4164200.0 4166600.0 4208600.0 4723700.0 2772140.0 False True 4050608.3560871994 4232121.898868258 2861262.136336065 5691140.325404836 4523180.983955628 4138209.6831684415 4587800.590097316 4194001.3488946217 3865995.1547866594 2747580.996292288 1.474245294880579 1.540308331066228 1.0413749913823045 2.071327590736987 1.646241180900369 1.5061283684640168 1.6697599074561604 1.5264341086046962 1.4070541177871048 1.0 21.389730580517547 -8.186905824263116 1.9706045767543796 1.0005731395044157 1.5649349951057065 0.337584997656848 0.2369029575121727 0.8287921174997979 5.861553083792302 0.22822566255667434 0.06355461669676217 6.502706847238502e-09 8.186905824263116 0.5643618556012908 LHTLEEEKEELAQYQK ddPTM_KYSE-520_SHP099_60min_R1 1 LHTLEEEKEELAQYQK 16 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 0 150.59 7.2838e-06 196400000.0 272320.0 247240.0 175410.0 166210.0 295610.0 263320.0 203080.0 231150.0 211130.0 203770.0 False True 257213.86674353894 235362.21928519412 186717.20926592327 182006.54842714148 318872.8252091776 261676.52220640532 223609.30826980362 230348.19460081577 172794.11415418127 201964.75633066086 1.2735581762712258 1.1653628264718336 0.9245039216655504 0.9011797490506541 1.5788538109446801 1.2956543852531535 1.107169945550826 1.140536590570708 0.8555656803372128 1.0 17.623744033239994 -7.6772903662776875 5.887933709497909 0.9298612068080134 1.1730853745947991 0.2216350611962189 0.1846143390146179 0.3256404715044272 17.280885926888384 0.14216911775344113 0.05098623405188816 2.102372338203841e-08 7.6772903662776875 0.24322416778678568 LHVENEDKK ddPTM_KYSE-520_SHP099_60min_R1 6 LHVENEDKK 9 1 B0YIW6;P48444-2;P48444 B0YIW6 ARCN1 Coatomer subunit delta 0 ;;;;; 213.31 1.5216000000000002e-08 6592590000.0 17550400.0 16295600.0 11192430.0 10001860.0 15848600.0 16213400.0 11807580.0 15431010.0 14242720.0 12916910.0 False True 16576844.326144999 15512734.915805737 11913911.946321182 10952433.767231151 17095794.653801177 16112206.156544633 13001205.417275792 15377483.427934801 11656601.077753251 12802476.22660391 1.2948154741891138 1.2116980060130735 0.9305943424885049 0.8554933884174439 1.335350626801058 1.2585226382270494 1.015522715071239 1.2011335272765398 0.9104958190455766 1.0 23.609919544306546 -7.208150167354431 0.01787401533853241 1.7705515613836774e-05 2.1727154901201633 0.09227627360032808 0.16018828437505933 1085.1765674794133 18.05406222964294 1084.62694316365 1104.4303916621366 6.192269260343203e-08 7.208150167354431 2.1726977846045497 LHVGNIS(ph)PTCTNK ddPTM_KYSE-520_SHP099_60min_R1 13 LHVGNISPTCTNK 13 0 E9PB51;Q9BWF3;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-4;Q9BWF3-2 E9PB51 RBM4 RNA-binding protein 4 1 LHVGNIS(0.994)PT(0.006)CTNK;LHVGNIS(0.931)PT(0.066)CT(0.003)NK;LHVGNIS(0.982)PT(0.017)CT(0.002)NK;LHVGNIS(0.943)PT(0.057)CTNK;LHVGNIS(0.998)PT(0.002)CTNK;LHVGNIS(1)PTCTNK;LHVGNIS(1)PTCTNK;LHVGNIS(1)PTCTNK;LHVGNIS(0.999)PT(0.001)CTNK;LHVGNIS(0.987)PT(0.009)CT(0.004)NK;LHVGNIS(0.908)PT(0.09)CT(0.002)NK;LHVGNIS(1)PTCTNK;LHVGNIS(0.999)PT(0.001)CTNK 319.91 4.7798999999999994e-40 46036810000.0 22415900.0 21782860.0 20246310.0 19109730.0 19676070.0 21006100.0 19819570.0 20991590.0 24732850.0 20854020.0 True False 21172445.3420112 20736378.708860528 21551419.537841354 20925912.99365015 21224464.767475847 20874993.138082843 21823125.555962943 20918775.07376394 20241987.90441079 20669269.606982075 1.0243441468710222 1.003246805675987 1.0426792986705873 1.0124166645241002 1.0268608988634136 1.0099531108264839 1.055824708415971 1.0120713247988977 0.9793276825598642 1.0 24.300984073148935 -7.564719184599172 6.689591074544076 0.9910243334451633 1.024588223408333 0.45566816750121564 0.01531545913848551 0.17571040046597924 20.306275874703545 0.010000700423207673 0.0037419182333376455 2.724462379729538e-08 7.564719184599172 0.033563889963169724 LHVGNIS(ph)PTCTNQELR ddPTM_KYSE-520_SHP099_60min_R1 7 LHVGNISPTCTNQELR 16 0 Q9BQ04;E9PLB0;E9PM61;U3KQD5 Q9BQ04 RBM4B RNA-binding protein 4B 1 LHVGNIS(1)PTCTNQELR;LHVGNIS(1)PTCTNQELR;LHVGNIS(0.5)PT(0.5)CTNQELR;LHVGNIS(1)PTCTNQELR;LHVGNIS(1)PTCTNQELR;LHVGNIS(0.929)PT(0.061)CT(0.011)NQELR;LHVGNIS(1)PTCTNQELR 255.82 1.7579e-24 5168860000.0 2342693.0 2304070.0 2173584.0 1960211.0 2009725.0 2298044.0 1940822.0 2196808.0 3017920.0 2330396.0 True False 2212739.1492472845 2193379.0187204233 2313696.7024973617 2146508.864081075 2167878.9237289447 2283701.0549798617 2137019.22835738 2189187.785786839 2469941.8035721444 2309750.5044606533 0.9579992059635801 0.9496172917743756 1.0017084953673947 0.9293249898357759 0.9385770971982809 0.9887219639391855 0.9252164786760777 0.9478027092359196 1.0693543734711282 1.0 21.139305591780644 -7.748945171327823 24.99992152137477 1.0346771869963973 0.9550023573300237 0.5718484717796707 0.02762177609726065 132.76257916355354 265650.9327869008 0.018223547823591174 0.006781757983244588 1.7826038028429062e-08 7.748945171327823 -0.07967482966637363 LHY(ph)EELPAQEEPPEPPLQIGS(ph)CSGYMELMVK ddPTM_KYSE-520_SHP099_60min_R1 6 LHYEELPAQEEPPEPPLQIGSCSGYMELMVK 31 0 H7C3T2;Q2TAZ0;Q2TAZ0-3 H7C3T2 ATG2A Autophagy-related protein 2 homolog A 2 LHY(0.77)EELPAQEEPPEPPLQIGS(0.537)CS(0.537)GY(0.157)MELMVK;LHY(0.405)EELPAQEEPPEPPLQIGS(0.595)CS(0.595)GY(0.405)MELMVK;LHY(0.77)EELPAQEEPPEPPLQIGS(0.537)CS(0.537)GY(0.157)MELMVK;LHY(0.412)EELPAQEEPPEPPLQIGS(0.588)CS(0.588)GY(0.412)MELMVK;LHY(0.427)EELPAQEEPPEPPLQIGS(0.573)CS(0.601)GY(0.399)MELMVK;LHY(0.719)EELPAQEEPPEPPLQIGS(0.535)CS(0.535)GY(0.211)MELMVK 54.703 0.034565 2316720000.0 582923.0 538220.0 466196.0 297059.0 547147.0 499750.0 459017.0 584600.0 683478.0 569508.0 True False 550587.0991618086 512363.1033153097 496247.7400999739 325291.3980459549 590204.3560594227 496630.87487714994 505418.9179342155 582572.1590466654 559375.6242782727 564462.6021905189 0.9754182066715078 0.9077007074108615 0.8791507854978834 0.5762851193039034 1.0456040024069042 0.8798295457482334 0.8953984125304819 1.0320828284918584 0.9909879274685249 1.0 19.106518474528876 -7.175593888176108 4.537893460900408 1.0085364168232138 0.8739519902642295 0.20796948247284308 0.1143166443148703 0.36267391753695993 13.17587471803587 0.058274727874885766 0.03223929760466763 6.67430596539556e-08 7.175593888176108 -0.13458442655898428 LHYDILEDR ddPTM_KYSE-520_SHP099_60min_R1 1 LHYDILEDR 9 0 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 0 180.8 0.0018300999999999999 0.0 132010.0 135510.0 87904.0 87578.0 135710.0 146740.0 111010.0 123060.0 87093.0 120060.0 False True 124687.14214458925 128999.8961953431 93570.43249137286 95901.38678871411 146389.6049157251 145824.1412295606 122231.97415319536 122633.13358241988 71279.10663586475 118996.36180526651 1.0478231456238596 1.0840658843540698 0.7863301959138691 0.8059186460309893 1.2302023582476134 1.225450417284159 1.0271908510381504 1.030562041746325 0.5990024027164005 1.0 16.860557939686522 -7.715062040823277 24.727969913129883 0.79950114872257 1.0290598994472722 0.2379409903528391 0.1647787233682153 144.33378039444653 76957.38095498669 0.11726723284064462 0.044322459927922324 1.9272495776841323e-08 7.715062040823277 0.2295587507247021 LHYEELPAQEEPPEPPLQIGS(ph)CSGY(ph)MELMVK ddPTM_KYSE-520_SHP099_60min_R1 1 LHYEELPAQEEPPEPPLQIGSCSGYMELMVK 31 0 H7C3T2;Q2TAZ0;Q2TAZ0-3 H7C3T2 ATG2A Autophagy-related protein 2 homolog A 2 LHY(0.152)EELPAQEEPPEPPLQIGS(0.545)CS(0.545)GY(0.757)MELMVK 46.608000000000004 0.058071000000000005 645100000.0 92609.0 88197.0 70963.0 57782.0 87152.0 83129.0 74586.0 105720.0 100460.0 84075.0 True False 87471.79415853547 83959.88373360407 75537.38852481448 63273.58390720825 94010.36657295167 82610.16107586322 82125.880769212 105353.28199523337 82218.9963905133 83330.16090936029 1.0497014910805238 1.0075569615775584 0.9064831712850987 0.7593119131982964 1.1281673471770735 0.9913596730686716 0.9855480881471211 1.2642875142150274 0.9866655181422772 1.0 16.346551145473573 -5.806224892013716 24.999990667264637 1.0654639859283683 0.9345126789509959 0.2536395373221767 0.10766632196567594 189.15097044580372 105586.04526128383 0.03435451681983697 0.03895454398145802 1.562338402753998e-06 5.806224892013716 -0.13095130697737245 LHYTPPLQS(ph)PIIDNDPLLGQSPWR ddPTM_KYSE-520_SHP099_60min_R1 1 LHYTPPLQSPIIDNDPLLGQSPWR 24 0 C9J5J4;H7C4T7;H0Y322;Q5TKA1-3;Q5TKA1;Q5TKA1-2 C9J5J4 LIN9 Protein lin-9 homolog 1 LHYT(0.004)PPLQS(0.996)PIIDNDPLLGQSPWR 199.2 1.3367e-15 174230000.0 47739.0 67647.0 46309.0 77306.0 47874.0 57252.0 54579.0 52447.0 72301.0 61653.0 True False 45090.82250466289 64397.136579782906 49294.152237019785 84653.13899710352 51641.411434201 56894.66903144894 60096.377959708545 52265.07359822184 59172.960959889446 61106.8023853082 0.7379018496229479 1.0538456287358573 0.806688458777406 1.3853308583113904 0.8451008630524751 0.931069321426775 0.9834646162758045 0.8553069635138991 0.9683530908191704 1.0 15.899045368779996 -9.255392422065366 16.41243622042917 0.999999999999999 0.9577056371088466 0.006141145590455865 0.16966962928837492 0.0 0.0 0.1569375578480523 0.03806294868435304 5.554021772822823e-10 9.255392422065366 -0.042294362891152404 LIALSIDSVEDHLAWSK ddPTM_KYSE-520_SHP099_60min_R1 5 LIALSIDSVEDHLAWSK 17 0 P30041 P30041 PRDX6 Peroxiredoxin-6 0 ;;;; 226.67 2.8522e-18 237157800.0 516600.0 498981.0 407591.0 850868.0 539343.0 408041.0 388396.0 427909.0 386978.0 219052.0 False True 487943.1681834309 475009.2037742498 433864.96802865766 931734.2388972085 581786.225658108 405494.26476387586 427658.8580596735 426424.6835537118 316712.5501215217 217111.36969987708 2.247432591199332 2.187859642868435 1.9983521297314322 4.291503665538968 2.6796672438773594 1.8676786265242997 1.969767215097237 1.9640826924134744 1.4587561699754732 1.0 17.72807575349961 -7.347798369462765 0.8271437239829146 1.1000799072207919 2.639450121961582 0.41815828736078875 0.6310802237065156 0.6660299326023388 0.8513609262174713 0.6309468940966082 0.2688314575980933 4.489537779852414e-08 7.347798369462765 1.53937021474079 LICCDILDVLDK ddPTM_KYSE-520_SHP099_60min_R1 3 LICCDILDVLDK 12 0 P62258;P62258-2;K7EIT4 P62258 YWHAE 14-3-3 protein epsilon 0 ;; 236.92 2.3154e-14 360115400.0 559428.0 759285.0 899068.0 348116.0 586815.0 628550.0 433909.0 448095.0 567239.0 530294.0 False True 528395.41364793 722807.8088899803 957023.361839661 381200.8399751084 632994.0019793767 624626.9863012164 477772.7562637494 446540.6630311594 464242.6965315382 525596.0077224893 1.0053261552300807 1.375215561514724 1.8208345340875611 0.7252734693075894 1.2043356355050412 1.1884165349882465 0.9090113875370411 0.8495891454086718 0.8832690692290319 1.0 19.003594791838225 -6.038727598693697 0.8415528400931797 0.9018884632859128 1.336961365843497 0.24859577679517963 0.26284385502838403 0.8562035853682782 1.3373584348721197 0.15947700179346588 0.19103840505904882 9.14686777997533e-07 6.038727598693697 0.43507290255758413 LIDLES(ph)PTPESQK ddPTM_KYSE-520_SHP099_60min_R1 10 LIDLESPTPESQK 13 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 LIDLES(0.952)PT(0.048)PESQK;LIDLES(0.796)PT(0.203)PES(0.001)QK;LIDLES(0.628)PT(0.372)PESQK;LIDLES(0.952)PT(0.048)PESQK;LIDLES(0.992)PT(0.008)PESQK;LIDLES(0.897)PT(0.103)PESQK;LIDLES(0.976)PT(0.024)PESQK;LIDLES(0.975)PT(0.025)PESQK;LIDLES(0.977)PT(0.023)PESQK;LIDLES(0.979)PT(0.021)PESQK 350.18 9.205e-52 12727780000.0 13609610.0 14294470.0 10818590.0 9158020.0 10691440.0 15069190.0 11830330.0 15027970.0 17263880.0 14663120.0 True False 12854657.80321509 13607742.20476308 11515973.621756038 10028395.46734088 11532795.502027702 14975137.595577788 13026255.209294386 14975841.479624577 14129194.578999132 14533216.164534738 0.8845019338929385 0.9363200857061438 0.7923898943895401 0.6900327741503682 0.7935473725472457 1.030407683064776 0.896309190052662 1.030456115843785 0.9722001254944838 1.0 23.79285066733253 -6.256216580449414 24.981419982911937 0.982180292170178 0.8171732690650857 0.587961751045207 0.06965174223391712 353.2104408878698 1689459.4290194453 0.025756195346890384 0.025025208956297874 5.5434919289085e-07 6.256216580449414 -0.1650070231050923 LIDLESPT(ph)PESQK ddPTM_KYSE-520_SHP099_60min_R1 1 LIDLESPTPESQK 13 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 LIDLES(0.047)PT(0.953)PESQK 255.16 3.5398999999999996e-16 2354800000.0 2493400.0 2475700.0 1999800.0 1727000.0 2012200.0 2709400.0 2369700.0 2786800.0 3396400.0 2938700.0 True False 2355086.131530331 2356763.655898537 2128710.30779313 1891133.5607585143 2170548.692148123 2692489.6295990986 2609252.4020433025 2777133.241244007 2779699.3762765196 2912665.4042740036 0.8085673445616208 0.809143285885243 0.7308461537221169 0.6492793707040609 0.7452104484652068 0.9244074604821336 0.8958297778435254 0.9534679943562626 0.9543490207277597 1.0 21.47390854909972 -6.282639041624538 4.914495204733695 0.9414208501804036 0.7447594159296234 0.8055873525783962 0.04840133437279844 0.09455094151758163 6.509257233376977 0.018946855884282302 0.017300644587948825 5.216280755766448e-07 6.282639041624538 -0.1966614342507802 LIDLHS(ph)PSEIVK ddPTM_KYSE-520_SHP099_60min_R1 1 LIDLHSPSEIVK 12 0 P60866;P60866-2;G3XAN0 P60866 RPS20 40S ribosomal protein S20 1 LIDLHS(1)PSEIVK 139.58 2.4455999999999998e-05 394680000.0 219070.0 231640.0 221870.0 231640.0 209660.0 232220.0 199740.0 236010.0 294770.0 222100.0 True False 206917.7503947817 220511.66670127126 236172.09520455147 253654.99595489426 226159.0491977815 230770.6288423645 219931.66847454463 235191.33639514796 241247.19854699954 220132.36679118546 0.9399696801109718 1.0017230537953812 1.0728640165332028 1.1522839628372683 1.0273775387710835 1.0483266600284653 0.9990882834743189 1.068408702561433 1.0959187967839519 1.0 17.74801175949397 -4.50366688376799 3.1195570452849184 1.0600275750556396 0.9434808901753389 0.4256121878476977 0.04326697514821796 0.25693262196342204 4.73017346814748 0.011719491188088942 0.054616118523625926 3.135689965613856e-05 4.50366688376799 -0.11654668488030073 LIDLHSPSEIVK ddPTM_KYSE-520_SHP099_60min_R1 2 LIDLHSPSEIVK 12 0 P60866;P60866-2;G3XAN0 P60866 RPS20 40S ribosomal protein S20 0 ; 140.39 6.0213e-05 1053460000.0 1291800.0 1511610.0 975830.0 1032740.0 1546650.0 1358570.0 1196160.0 1182100.0 1200630.0 1491250.0 False True 1220141.2788605436 1438989.9866271315 1038733.563183204 1130891.2990953976 1668362.5557652805 1350090.6606940469 1317079.5261966144 1177999.5710042128 982625.8574192901 1478038.685174943 0.8255137643546359 0.9735807330758804 0.7027783329367039 0.7651297022456104 1.1287678546572077 0.9134339136287546 0.8910994951669501 0.7970018530771967 0.6648174146422866 1.0 20.49525259941694 -10.30431032207874 5.495641493287062 1.0000213929343997 0.8575929728277623 0.10552093106444282 0.12868942425287508 3.5151523028414364e-05 4.449898537918512e-06 0.12984916655552772 0.031488320823288604 4.9623761162969843e-11 10.30431032207874 -0.14242842010663748 LIDSWMGK ddPTM_KYSE-520_SHP099_60min_R1 2 LIDSWMGK 8 0 P46063 P46063 RECQL ATP-dependent DNA helicase Q1 0 ; 129.68 0.0061466 417070000.0 862570.0 894860.0 562750.0 528240.0 917090.0 971930.0 699670.0 755940.0 710980.0 734010.0 False True 814721.5226093344 851869.5823877557 599025.7654318358 578443.7707788522 989259.7654716838 965863.8243508715 770399.4717211606 753317.8205777223 581883.954347274 727507.2424511383 1.119880978592531 1.1709430953808957 0.8233949168857494 0.7951037969463269 1.3597937006628846 1.327634651576327 1.0589578038089469 1.0354781047122255 0.7998325245351151 1.0 19.47260208478946 -7.581664689761119 5.859119668152492 0.9007318916558477 1.091047330537145 0.15607014888543358 0.17771967970315788 0.4192504554680033 28.925792213184955 0.13643032627167387 0.05006576113770384 2.6202052364530613e-08 7.581664689761119 0.19031543888129743 LIEDKPR ddPTM_KYSE-520_SHP099_60min_R1 2 LIEDKPR 7 1 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80 Q13247;A0A590UK01;A0A590UK80 SRSF6 Serine/arginine-rich splicing factor 6 0 ; 143.85 0.0016989000000000001 1241930000.0 1965950.0 1906100.0 1303050.0 1251690.0 2110470.0 2027220.0 1483940.0 1825530.0 1773850.0 1723200.0 False True 1856894.8344758376 1814528.0948855688 1387046.687953716 1370650.24126568 2276551.9820683063 2014567.3680209212 1633951.1370587547 1819197.6625119043 1451763.5551195694 1707933.788629314 1.087217108085947 1.0624112638123995 0.8121197069746345 0.8025195416771292 1.3329275392433868 1.179534816532726 0.9566829510235679 1.065145308690148 0.850011613321772 1.0 20.703820616491196 -2.9415427172575215 1.9678208553323528 1.011331182147065 11.496642923396612 0.023084266351525717 0.157920710150933 1098.971615889798 41.985253284199615 0.045204191270579126 50749.44008813172 0.0011440823422055634 2.9415427172575215 10.485311741249546 LIEDNEY(ph)TAR ddPTM_KYSE-520_SHP099_60min_R1 2 LIEDNEYTAR 10 0 Q573B4;P06239;P06239-3;J3QRU1;P06241-3;P06241-2;P12931;P06241;P12931-2;P07947 Q573B4 LCK;YES1;FYN;SRC Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lck;Tyrosine-protein kinase Fyn;Proto-oncogene tyrosine-protein kinase Src;Tyrosine-protein kinase Yes 1 LIEDNEY(0.997)T(0.003)AR;LIEDNEY(0.999)T(0.001)AR 244.61 3.7753e-23 1945830000.0 1172410.0 1140170.0 1104000.0 1281820.0 1291460.0 1124860.0 1172810.0 1373370.0 1713630.0 1181210.0 True False 1107374.0801586083 1085394.5217699378 1175165.6064624544 1403643.7874067628 1393090.55459776 1117839.3314943698 1291369.080322572 1368606.1000169686 1402477.9890969063 1170745.3983674748 0.9458709653719471 0.9270969787995298 1.00377555026152 1.1989317142429508 1.189917599966936 0.9548099296850716 1.1030315234407915 1.1690040395848638 1.197935939831638 1.0 20.15899593683758 -5.047003470769124 4.983387186076464 1.1187969845334527 0.941398345251234 0.4694403278178929 0.07866620341740901 0.17375634300136808 9.900191954269896 0.022310628972000972 0.04149182192803939 8.974216225106939e-06 5.047003470769124 -0.17739863928221866 LIEDTEDWRPR ddPTM_KYSE-520_SHP099_60min_R1 6 LIEDTEDWRPR 11 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6;H0YBI4;Q96HC4-3;Q96HC4-2 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 0 ;;;;; 186.87 1.0665999999999999e-06 3871510000.0 3588960.0 3304490.0 2293730.0 2063910.0 3572550.0 3292270.0 2537750.0 2660360.0 2613600.0 2806950.0 False True 3389873.234385612 3145737.340259386 2441587.5058977623 2260063.38586283 3853689.359971069 3271721.721724451 2794290.5360532515 2651131.832092691 2139036.1234943783 2782082.6067740573 1.2184660606883682 1.1307131328882438 0.8776114339497944 0.8123638673991314 1.3851815005736243 1.1759973315523333 1.0043880542042387 0.9529306662704711 0.7688614702834727 1.0 21.40773382695197 -7.208237074264769 2.7058879810153136 0.8860877787044708 1.089994852102943 0.21617037452543808 0.1630899455296294 0.4842667699122113 6.912355275415905 0.1056255980079502 0.04995911783702016 6.191030245871304e-08 7.208237074264769 0.20390707339847225 LIEECISQIVLHK ddPTM_KYSE-520_SHP099_60min_R1 1 LIEECISQIVLHK 13 0 A0A2R8Y5N1;A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610;H9KV28 A0A2R8Y5N1 DIAPH1 Protein diaphanous homolog 1 0 143.86 1.6878e-05 227470000.0 185630.0 145110.0 96545.0 156030.0 148660.0 163500.0 128980.0 129610.0 108970.0 91452.0 False True 175332.73385576904 138138.69778544933 102768.4451774618 170859.0442878701 160358.69624030413 162479.53585275426 142018.5571234944 129160.41316120139 89183.79491015557 90641.80642857928 1.9343473035692589 1.524006451639895 1.1337863754782695 1.8849916061910965 1.769147180078079 1.7925452090452227 1.5668107545429066 1.4249540940357652 0.9839145800831701 1.0 16.467888992909817 -7.608590676812388 2.235664101659815 0.9666675365746591 1.6521442810673443 0.599327122524874 0.21521626947718775 0.2311883253357456 2.1236829021393517 0.20065237045600057 0.06216804467002662 2.4626875973580738e-08 7.608590676812388 0.6854767444926853 LIEFS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 2 LIEFSPLR 8 0 H0YK10;B7ZAX5;Q01415-2;Q01415 H0YK10 GALK2 N-acetylgalactosamine kinase 1 LIEFS(1)PLR;LIEFS(1)PLR 83.499 0.007012300000000001 48009000.0 146429.0 135718.0 125383.0 97056.0 110354.0 119441.0 103550.0 122835.0 155107.0 119400.0 True False 138306.29147102535 129197.90356312894 133465.38879989315 106280.17305904943 119038.23197163001 118695.5244146106 114017.84455061141 122408.91405490466 126943.47872927878 118342.20889179445 1.1686979038686438 1.091731384541422 1.1277919353518786 0.898074947681821 1.0058814440456487 1.0029855410518762 0.9634588167511982 1.0343639450471014 1.0726813359158174 1.0 16.852605203211795 -5.226506095913744 24.68548882042343 0.9974594931508689 1.1256395690403078 0.6354039310222646 0.046010802219645146 350.51662361626313 247690.9156628438 0.012655943239717297 0.021919439212111556 5.936000161493035e-06 5.226506095913744 0.12818007588943892 LIES(ph)LSPDFCHQNK ddPTM_KYSE-520_SHP099_60min_R1 2 LIESLSPDFCHQNK 14 0 Q9H6R7-2;Q9H6R7 Q9H6R7-2 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 1 LIES(0.595)LS(0.405)PDFCHQNK;LIES(0.552)LS(0.448)PDFCHQNK 78.069 0.0086164 722290000.0 1649980.0 1677500.0 1546540.0 1854660.0 1789990.0 1520870.0 1633140.0 1750740.0 2136100.0 1698200.0 True False 1558452.3202464166 1596910.3820211648 1646232.4429514916 2030926.328776136 1930852.0293500763 1511377.6861919183 1798233.7291104356 1744667.0915657887 1748238.0866989389 1683155.269179607 0.9259112030739907 0.9487599933662215 0.9780633273090057 1.2066185253164656 1.1471621571141206 0.8979431154492268 1.0683706738398053 1.0365455424775893 1.038667150150119 1.0 20.682736839125102 -5.01525603422571 24.333390732612834 1.0584855723443682 0.9438545585102719 0.2879514008973202 0.07766545459666807 630.8503316640896 1006212.9988521973 0.02207994740453144 0.04000111758937107 9.654815206296979e-06 5.01525603422571 -0.11463101383409635 LIESLS(ph)PDFCHQNK ddPTM_KYSE-520_SHP099_60min_R1 4 LIESLSPDFCHQNK 14 0 Q9H6R7-2;Q9H6R7 Q9H6R7-2 C2orf44 WD repeat and coiled-coil-containing protein C2orf44 1 LIES(0.144)LS(0.856)PDFCHQNK;LIES(0.049)LS(0.951)PDFCHQNK;LIES(0.002)LS(0.998)PDFCHQNK;LIESLS(1)PDFCHQNK 233.14 1.8966999999999997e-18 4940590000.0 3268600.0 2841300.0 2918560.0 2988660.0 3140230.0 3062260.0 2760460.0 3080450.0 3870470.0 3171230.0 True False 3087284.2422074424 2704799.683121754 3106695.047461106 3272701.3478266033 3387348.235535386 3043147.299452332 3039514.236293388 3069764.6379324347 3167690.2146086954 3143135.3693796056 0.9822307598596407 0.8605419001268244 0.9884063784609786 1.0412218893622045 1.0776972155049063 0.9681884302848179 0.967032557968806 0.976656833758435 1.0078122137112842 1.0 21.58377297716782 -4.937252317027906 9.619971222601807 1.0051903320731936 0.921730972286937 0.3843728967158957 0.04199293598292577 0.3660028910817836 52.84521604630668 0.011414961973712421 0.0238217811212298 1.1554407575306131e-05 4.937252317027906 -0.08345935978625663 LIFAGKQLEDGR ddPTM_KYSE-520_SHP099_60min_R1 2 LIFAGKQLEDGR 12 1 P62979;J3QTR3;A0A2R8Y422;P0CG48;F5H265;Q96C32;Q5PY61;J3QKN0;F5GXK7;F5H747;F5H388;B4DV12;M0R2S1;F5H2Z3;F5GYU3;F5H6Q2;M0R1M6;J3QS39;P62987;P0CG47;M0R1V7;Q49A90;F5GZ39 P62979 RPS27A;UBC;UBB;UBA52 Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a;Polyubiquitin-C;Ubiquitin;Ubiquitin-60S ribosomal protein L40;Ubiquitin;60S ribosomal protein L40;Polyubiquitin-B;Ubiquitin 0 ; 126.5 9.889700000000001e-05 1974130000.0 671270.0 757760.0 470910.0 26916000.0 1799690.0 555950.0 968340.0 796270.0 1169520.0 431080.0 False True 634033.3149564302 721356.0721790508 501265.61208264006 29474088.547409534 1941315.364164626 552480.1098308188 1066229.2572876762 793507.9252208152 957164.6492000106 427260.966575165 1.483948604148676 1.6883266401826755 1.1732071293586235 68.98380814813882 4.543629107348153 1.2930741468367317 2.495498865328954 1.8571973273884803 2.24023424576423 1.0 18.70475799669647 -5.970462918916277 24.999995389095794 1.991456832505072 18.523535344095418 0.15495538876418724 18.500944540498864 424.2501714003995 359080.8077263268 6.048498723544769 6.8582678082401705 1.07037777037997e-06 5.970462918916277 16.532078511590345 LIFYDLR ddPTM_KYSE-520_SHP099_60min_R1 2 LIFYDLR 7 0 Q15046-2;Q15046;H3BVA8 Q15046-2 KARS Lysine--tRNA ligase 0 ; 100.82 0.03789 920870000.0 2448100.0 2490400.0 1769940.0 1497210.0 2165500.0 2422200.0 1827390.0 1703400.0 1808410.0 1829130.0 False True 2312299.0128336432 2370757.4458333896 1884033.1644041308 1639504.388247399 2335912.5299904384 2407082.1513305306 2012120.4148077422 1697491.3029765505 1480048.3303062723 1812925.3312416086 1.2754518749263828 1.3076972366036397 1.0392227037358581 0.9043419273779799 1.2884769657836124 1.3277337515505976 1.109874951898715 0.9363272020773181 0.8163868113049307 1.0 20.789888075506177 -7.215614403870873 3.5107578897936853 0.9010947821745248 1.1822549795196788 0.4603148142915908 0.13153893008592074 0.2376190843044449 6.011129854491429 0.07895442095581763 0.04002971950855183 6.086751845947434e-08 7.215614403870873 0.2811601973451541 LIGDAAK ddPTM_KYSE-520_SHP099_60min_R1 4 LIGDAAK 7 0 E9PKE3;P11142;E9PNE6;P11142-2;P54652;E9PLF4;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PN25;E9PI65;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;P11021 E9PKE3;A0A0G2JIW1;P11021 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA5 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;78 kDa glucose-regulated protein 0 ;;; 125.08 0.017308 2758310000.0 7926800.0 10728000.0 6943000.0 5371300.0 9191500.0 10248000.0 7400600.0 8773400.0 8734900.0 9351200.0 False True 7487084.602315961 10212610.776943695 7390556.889192774 5881786.737059763 9914818.75751887 10184038.430697415 8148724.870895739 8742967.123126954 7148862.348909965 9268355.643123504 0.8078115353580411 1.1018794671005925 0.7973967739008883 0.6346095212071036 1.0697494937923535 1.0987966822629736 0.8791985530833125 0.9433137289691346 0.7713193822265484 1.0 23.14388197333771 LIHGEDS(ph)DS(ph)EGEEEGR ddPTM_KYSE-520_SHP099_60min_R1 1 LIHGEDSDSEGEEEGR 16 0 Q9C0C9 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 2 LIHGEDS(1)DS(1)EGEEEGR 125.52 0.0020715 0.0 372560.0 390350.0 409080.0 318760.0 347600.0 375400.0 366800.0 355010.0 547200.0 355720.0 True False 351893.35412005277 371597.00007270434 435449.95135114185 349054.85456131137 374954.14242654166 373056.9893524405 403879.72362302506 353778.55316995695 447842.2737894566 352568.5975459721 0.9980847885188321 1.053970780889671 1.2350786609529587 0.9900338742329354 1.0634927359849473 1.0581117885968188 1.1455351566594425 1.0034318303796954 1.2702273455623385 1.0 18.42754445736999 -6.721833790341932 24.991632433853837 1.1050847757419449 1.069949715745314 0.03714132527458458 0.09462572365051847 691.5693174929088 436387.53985402413 0.03497294534130369 0.02708956643605009 1.8974319520233658e-07 6.721833790341932 -0.03513505999663091 LIHPDEDISLEER ddPTM_KYSE-520_SHP099_60min_R1 1 LIHPDEDISLEER 13 0 J3KS31;J3QRS9;X6R4W8;O43670-3;O43670-2;O43670;O43670-4 J3KS31 ZNF207 BUB3-interacting and GLEBS motif-containing protein ZNF207 0 170.18 1.1059999999999999e-06 224120000.0 151580.0 251310.0 169840.0 105690.0 231960.0 180070.0 141640.0 170760.0 206240.0 155990.0 False True 143171.55523276128 239236.69037599952 180788.15815360832 115734.74582314286 250213.9323281378 178946.11633642518 155958.3534731879 170167.67341568353 168792.01488731272 154608.04995838355 0.9260291121406636 1.5473753820735452 1.1693321156451542 0.7485686926023298 1.6183758374514707 1.157417847159917 1.0087337206255935 1.1006391546978842 1.09174143864273 1.0 17.238255912281016 -6.533979632554953 20.714246786582112 1.0621517568945655 1.213505394771247 0.07921911328377373 0.24191370963898412 79.74779552603083 148797.05442631638 0.09147013044417183 0.07100441613906693 2.924289517300377e-07 6.533979632554953 0.15135363787668155 LIHTLDDR ddPTM_KYSE-520_SHP099_60min_R1 3 LIHTLDDR 8 0 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 0 ;; 114.89 0.0012562 0.0 587680.0 534840.0 367200.0 294184.0 484583.0 507163.0 329251.0 426885.0 418391.0 420842.0 False True 555080.2188889649 509145.48358879273 390870.2995407731 322143.15891035536 522716.9251998872 503997.607594437 362534.9042601002 425404.23557070765 342421.74117881 417113.66729012126 1.3307648787803485 1.2206396565631095 0.9370834144087282 0.7723150406536315 1.253176211165275 1.2082979943303658 0.8691513433625778 1.0198760408270677 0.8209314823065731 1.0 18.67008105928116 -4.629778906568484 4.334233060630647 0.9921462980678135 1.306811898153592 0.39524094089837136 0.1459587089085873 0.21813703180572885 7.015568013728651 0.03985532744424619 0.11737764312995795 2.3454225342483222e-05 4.629778906568484 0.3146656000857786 LIIMDNLGPEQERDTGQS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 5 LIIMDNLGPEQERDTGQSPQK 21 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 LIIMDNLGPEQERDT(0.063)GQS(0.937)PQK;LIIMDNLGPEQERDT(0.005)GQS(0.995)PQK;LIIMDNLGPEQERDT(0.004)GQS(0.996)PQK;LIIMDNLGPEQERDT(0.019)GQS(0.981)PQK;LIIMDNLGPEQERDT(0.333)GQS(0.667)PQK 184.0 3.1117e-13 2550860000.0 1108230.0 1390850.0 1226470.0 725491.0 886170.0 922580.0 665751.0 753410.0 1499820.0 894910.0 True False 1046754.2726982664 1324031.4782915881 1305530.218621384 794441.4465131775 955906.537382419 916821.8360063246 733051.6081836228 750796.5965572163 1227490.4953854228 886981.793629444 1.1801305057402012 1.4927380559569086 1.4718793869254971 0.895668267622946 1.077707055824609 1.0336422264709382 0.8264562062588076 0.8464622407693725 1.383895931350124 1.0 19.75854496621221 -5.259305767971199 24.99292962202293 0.9989901427237776 1.392698205444559 0.5083378439362839 0.1675474365717262 145.19208538682776 1700756.8579184639 0.04581235375332002 0.07465827634020077 5.504200330009966e-06 5.259305767971199 0.3937080627207813 LIIWS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 LIIWSPVR 8 0 H0YJK8;A0A087WTS0;P18283 H0YJK8 GPX2 Glutathione peroxidase;Glutathione peroxidase 2 1 LIIWS(1)PVR 121.6 0.00092897 112050000.0 231060.0 181850.0 161630.0 143510.0 180330.0 185660.0 165130.0 175630.0 208150.0 184170.0 True False 218242.64119330927 173113.65303758506 172048.92841714385 157149.14725214528 194520.94506265316 184501.22707292 181822.95191349552 175020.78052235002 170355.2070344947 182538.39708209204 1.1955985408108967 0.9483684299020746 0.9425355496014857 0.8609100866678008 1.0656439859892726 1.0107529704555542 0.9960805771277 0.9588162453494036 0.9332568366856083 1.0 17.47784044228312 -4.258369848965459 24.800711563658844 0.9682447929920673 1.1955986341145466 0.632550516547884 0.051929378266847646 179.53032175543473 1450460.3731752096 0.013565443815096641 0.09443786449035799 5.5160748545916055e-05 4.258369848965459 0.22735384112247925 LIIWS(ph)PVRR ddPTM_KYSE-520_SHP099_60min_R1 2 LIIWSPVRR 9 1 H0YJK8;A0A087WTS0;P18283 H0YJK8 GPX2 Glutathione peroxidase;Glutathione peroxidase 2 1 LIIWS(1)PVRR;LIIWS(1)PVRR 109.39 0.00063742 553880000.0 289410.0 278760.0 280530.0 215920.0 251320.0 253160.0 221870.0 222750.0 273190.0 225360.0 True False 273355.85037546814 265367.9511727097 298613.41266387026 236440.971881285 271097.45418480586 251579.9345350663 244298.78484253143 221977.3322402409 223585.58255946956 223363.48572742677 1.2238161912867338 1.188054306676345 1.3368944869900172 1.0585480035435015 1.2137053346115374 1.126325252830592 1.0937274910754762 0.9937941804468551 1.0009943291819587 1.0 17.769033835434556 -6.696441066155854 0.7399322157646894 0.9786567616248297 1.2265284200126343 0.6702585806852193 0.06293043406891694 0.40092760692234686 0.4396437458517977 0.05079500413812029 0.033696024161499166 2.0116801650622971e-07 6.696441066155854 0.24787165838780456 LILFPR ddPTM_KYSE-520_SHP099_60min_R1 2 LILFPR 6 0 P26373 P26373 RPL13 60S ribosomal protein L13 0 ; 161.85 0.045739999999999996 1200730000.0 806070.0 891300.0 714570.0 554200.0 934360.0 803350.0 683810.0 637390.0 682440.0 614700.0 False True 761355.6902392932 848480.6101314244 760632.3255524238 606871.0013736942 1007888.8162188244 798335.9946624474 752936.188142477 635179.0428579447 558526.0989124222 609254.2362293641 1.2496518611856937 1.392654428441265 1.2484645658927696 0.9960882752815646 1.654299233857748 1.3103495178027786 1.2358325036890205 1.0425517051617526 0.9167373252406169 1.0 19.216684851679393 -7.268437389922877 2.4693144423428297 0.9608241240425103 1.3095070063990804 0.47368101955697883 0.15358378740563522 0.27517075724109036 3.2369448197236887 0.10342306479633709 0.044609472541895664 5.389675400444422e-08 7.268437389922877 0.3486828823565701 LILTDSGSAPTFCS(ph)DDEDVAPLSAK ddPTM_KYSE-520_SHP099_60min_R1 1 LILTDSGSAPTFCSDDEDVAPLSAK 25 0 A0A1B0GVL4;P78312-6;P78312-2;E7EUR8;P78312-4;P78312;D6RFZ4;P78312-3 A0A1B0GVL4 FAM193A Protein FAM193A 1 LILTDSGSAPT(0.001)FCS(0.999)DDEDVAPLSAK 179.42 4.699800000000001e-11 218020000.0 317970.0 328390.0 291250.0 244570.0 259360.0 314010.0 235830.0 295420.0 362930.0 312090.0 True False 300331.57024251955 312613.6514765606 310024.44101647666 267813.8592673482 279770.15644346323 312050.1471139044 259669.99787900233 294395.25697154657 297031.0607207742 309325.1254023459 0.970925235549074 1.0106312931092722 1.0022607785682496 0.8658005356629109 0.90445338405524 1.0088095711850567 0.839472698964379 0.9517340584235446 0.960255201818538 1.0 18.238764497715795 -5.217723940690049 24.983031293814925 0.9290018978690127 0.996208361054825 0.22968741974998752 0.051380859131848554 626.4276844019157 357997.679030888 0.01360376464024575 0.02356221678363336 6.0572578203255905e-06 5.217723940690049 0.06720646318581236 LIPGPLS(ph)PVAR ddPTM_KYSE-520_SHP099_60min_R1 13 LIPGPLSPVAR 11 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR;LIPGPLS(1)PVAR 208.79 1.4932000000000002e-09 46746350000.0 13067265.0 14785820.0 11361510.0 8343345.0 9470029.0 13248820.0 10038606.0 13751070.0 15262390.0 14809090.0 True False 12342397.761503028 14075487.013231708 12093891.11365875 9136294.00028186 10215266.405205643 13166129.199979763 11053406.261833254 13703370.747693878 12491124.709542163 14677892.983897684 0.8408834820531257 0.9589582802295368 0.8239528062322228 0.6224526919704885 0.6959627254683117 0.8970040328283907 0.7530649170122267 0.933606121990881 0.8510161998895546 1.0 23.807141547934062 -7.9021250848246 0.9413592834224213 0.9922679675020339 0.7980316090033983 0.2775711794541956 0.09605662910666456 0.8012280805690815 1.593992674046306 0.09959896385326637 0.034710571049039046 1.2527802991314076e-08 7.9021250848246 -0.19423635849863563 LIPHKGT(ph)MPK ddPTM_KYSE-520_SHP099_60min_R1 2 LIPHKGTMPK 10 1 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 LIPHKGT(1)MPK;LIPHKGT(1)MPK 129.71 0.0010015 1352900000.0 2026630.0 1823900.0 1839790.0 1601800.0 1856510.0 1792180.0 1568030.0 1781180.0 2092350.0 1728940.0 True False 1914208.7939132552 1736277.1062702846 1958385.8071680802 1754034.5904012714 2002606.7749030495 1780994.3398445842 1726541.774898069 1775001.5023105352 1712431.9838511879 1713622.9366949662 1.1170536720319322 1.013220043388898 1.142833563458939 1.0235825821660898 1.1686391049161848 1.0393151852177913 1.0075389036447069 1.035818011244614 0.9993050088101206 1.0 20.708618265002702 -6.509958734737922 24.20349730022263 1.0150469727556841 1.0891788714170811 0.4198412851174901 0.04583056171997644 416.57568894894905 780389.25218992 0.015478622924515387 0.013008016190326129 3.090589076376877e-07 6.509958734737922 0.07413189866139702 LIPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 LIPSPK 6 0 Q96HE9 Q96HE9 PRR11 Proline-rich protein 11 1 LIPS(1)PK;LIPS(1)PK;LIPS(1)PK;LIPS(1)PK 81.548 0.022656 3181990000.0 7372600.0 7674600.0 6498100.0 5748400.0 6358700.0 6478700.0 5988100.0 6114500.0 8161100.0 6169300.0 True False 6963627.1810862655 7305900.696190554 6916977.923327603 6294726.207680522 6859093.513946071 6438264.030148257 6593435.586224195 6093290.226635021 6679249.964589073 6114644.801642767 1.1388441041113966 1.194820129899899 1.1312150006602641 1.0294508367827637 1.1217484803210973 1.052925270232957 1.0783023053853913 0.9965076344251412 1.0923365430473768 1.0 22.54383726467666 -2.3322400100727307 0.21274567207686337 1.004220464750424 1.5564785096475808 0.5612117288197804 0.04066999595318577 20.648572087891274 0.4216502612640229 0.0684997724011948 3.4507415261336103 0.0046532886142622845 2.3322400100727307 0.5522580448971568 LIQNLDANHDGR ddPTM_KYSE-520_SHP099_60min_R1 4 LIQNLDANHDGR 12 0 Q96FQ6 Q96FQ6 S100A16 Protein S100-A16 0 ;;; 193.15 1.1884e-07 2260930000.0 1581110.0 1757620.0 1007530.0 961910.0 1533650.0 1550330.0 1198240.0 1409880.0 1366350.0 1353810.0 False True 1493402.6764353574 1673181.2969585932 1072476.995904997 1053329.6371912132 1654339.5297251611 1540653.8154042847 1319369.792895458 1404989.4553484654 1118255.2828805286 1341816.2966482423 1.1129710379623252 1.246952582956457 0.79927259684054 0.7850028650139014 1.2329105957779607 1.148185350895442 0.9832715522915811 1.0470803334689145 0.8333892543069029 1.0 20.35575574007556 -4.7350864315682735 24.999789810563733 0.9887066351782611 1.179961880567503 0.24335159247486415 0.14110749273244563 355.04428563540176 336808.3395083162 0.038329652838569116 0.10134436330641004 1.8404056947651102e-05 4.7350864315682735 0.19125524538924188 LIRPEYAWIVQPVSGAVYDRPGAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 LIRPEYAWIVQPVSGAVYDRPGASPK 26 2 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 1 LIRPEYAWIVQPVS(0.048)GAVY(0.08)DRPGAS(0.871)PK;LIRPEYAWIVQPVS(0.002)GAVY(0.007)DRPGAS(0.991)PK;LIRPEYAWIVQPVS(0.009)GAVY(0.007)DRPGAS(0.984)PK;LIRPEYAWIVQPVSGAVY(0.001)DRPGAS(0.999)PK;LIRPEYAWIVQPVSGAVYDRPGAS(1)PK;LIRPEYAWIVQPVSGAVYDRPGAS(1)PK 152.84 4.5862999999999997e-07 19865070000.0 4515150.0 5163170.0 4832620.0 5167090.0 5832150.0 5557210.0 4328240.0 4559190.0 5052650.0 3071790.0 True False 4264685.628771622 4915123.563123825 5144138.417665389 5658168.680057745 6291107.024605749 5522525.3910476165 4765780.73875169 4543375.234012945 4135216.126941343 3044576.3304164554 1.4007484674192 1.6143867092507762 1.6896073080098286 1.8584420510435313 2.066332501424004 1.813889616061034 1.5653346218124864 1.4922848833261062 1.3582238308919992 1.0 21.53781005245318 -7.837544453298333 1.0973614214213994 1.015122191003135 1.7430302941379605 0.6505870361813157 0.1679447476942552 0.3224855398845626 0.8426581730508748 0.17851996890155017 0.059050924740555386 1.4536355874848246e-08 7.837544453298333 0.7279081031348256 LIRPEYAWIVQPVSGAVYDRPGAS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 5 LIRPEYAWIVQPVSGAVYDRPGASPKR 27 3 G3V198;Q12769 G3V198 NUP160 Nuclear pore complex protein Nup160 1 LIRPEYAWIVQPVS(0.001)GAVY(0.001)DRPGAS(0.999)PKR;LIRPEYAWIVQPVS(0.001)GAVY(0.02)DRPGAS(0.979)PKR;LIRPEYAWIVQPVS(0.003)GAVY(0.003)DRPGAS(0.993)PKR;LIRPEYAWIVQPVSGAVYDRPGAS(1)PKR;LIRPEYAWIVQPVSGAVYDRPGAS(1)PKR 142.47 2.4486e-06 6680170000.0 3451020.0 4584370.0 4955180.0 4123820.0 4463280.0 4266890.0 3530520.0 2896950.0 4208710.0 2168420.0 True False 3259585.04116219 4364129.983920341 5274598.831368327 4515746.612928308 4814514.743410638 4240258.756787521 3887419.4161547543 2886901.1566032106 3444514.3569452204 2149209.4858052297 1.5166437067631606 2.030574503204029 2.454204146317607 2.101119803701417 2.240132837310094 1.972938787397382 1.8087671033604624 1.343238607343851 1.6026889792246974 1.0 21.035374680011138 -7.417320965971059 0.9268368969039337 1.1048898088444117 2.099746618108567 0.638848418510519 0.2523226965415541 0.35556598999913025 0.5617599929340147 0.23878769657641077 0.09355673062620083 3.825419206543523e-08 7.417320965971059 0.9948568092641554 LIS(ph)PLAS(ph)PADGVK ddPTM_KYSE-520_SHP099_60min_R1 6 LISPLASPADGVK 13 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 2 LIS(1)PLAS(1)PADGVK;LIS(1)PLAS(1)PADGVK;LIS(1)PLAS(1)PADGVK;LIS(1)PLAS(1)PADGVK;LIS(1)PLAS(1)PADGVK;LIS(1)PLAS(1)PADGVK 239.87 7.9765e-16 1327880000.0 3777660.0 3596320.0 3281610.0 3027570.0 3177710.0 2676050.0 2937620.0 3198500.0 3748010.0 3220520.0 True False 3568105.669221487 3423547.3890136303 3493147.831361647 3315309.342527889 3427777.698303355 2659347.7793196514 3234583.2980083744 3187405.150035509 3067465.86364332 3191988.6983266426 1.117831548429986 1.072543706313365 1.0943484333741167 1.0386344238204526 1.0738689958709193 0.8331319533536503 1.013344220079495 0.9985640462030656 0.960988948755175 1.0 21.606024112834003 -6.056732015070948 24.999980501368277 0.963166403813453 1.0780921140513557 0.5783647326874715 0.050470193650194964 211.900292529101 93377.11730311753 0.016420599362268844 0.016420644680289403 8.775421486045391e-07 6.056732015070948 0.11492571023790277 LIS(ph)PQNLSVR ddPTM_KYSE-520_SHP099_60min_R1 2 LISPQNLSVR 10 0 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 LIS(1)PQNLSVR;LIS(1)PQNLSVR 102.73 0.0017293 242740000.0 576790.0 560910.0 397420.0 451850.0 459260.0 471730.0 474150.0 506470.0 614800.0 523820.0 True False 544794.3088976413 533963.0416569258 423038.3290944831 494793.6881463439 495401.149168048 468785.75809064147 522081.7092580624 504713.17378098605 503167.81784678064 519179.3623257928 1.0493373743846441 1.028475090506113 0.814821157758232 0.9530303476043285 0.954200388375947 0.9029360411989401 1.0055902586714307 0.9721364337750217 0.9691598980219776 1.0 18.985873510967256 -6.789106244528804 24.99579073182665 0.9843996731811858 0.9481330524310586 0.0760856627272064 0.06135783802091162 688.4371533250161 621966.1468766978 0.027076250313875696 0.018259041241095317 1.6251511349069848e-07 6.789106244528804 -0.03626662075012721 LIS(ph)PYK ddPTM_KYSE-520_SHP099_60min_R1 3 LISPYK 6 0 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 1 LIS(1)PYK;LIS(1)PYK;LIS(1)PYK 110.81 0.0089634 8249500000.0 6069590.0 5559880.0 4850720.0 4528660.0 4724070.0 5152170.0 4624840.0 5065270.0 5788400.0 4710900.0 True False 5732897.743272307 5292775.019249976 5163405.172626409 4959062.484808721 5095827.4327185135 5120013.395929576 5092363.961288738 5047699.760612902 4737372.473689496 4669165.091024736 1.227820741291055 1.133559194431563 1.10585191826944 1.062087629829418 1.0913787226144405 1.0965586558015434 1.0906369472943873 1.0810711684441832 1.014608046906688 1.0 22.154733169211184 -1.0000000000000002 0.5065842054505769 1.0586889923523852 6.516968759522338 0.7587081594271097 0.029403233058699088 56.787712509995785 0.5937864953048956 0.01611506379387783 330.86112387223875 0.09999999999999995 1.0000000000000002 5.458279767169953 LIS(ph)PYKK ddPTM_KYSE-520_SHP099_60min_R1 2 LISPYKK 7 1 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 1 LIS(1)PYKK;LIS(0.99)PY(0.01)KK 90.15 0.007879899999999999 9706600000.0 5422300.0 4329700.0 4077600.0 4145400.0 4236400.0 4159900.0 4170400.0 4183700.0 4844300.0 3820200.0 True False 5121514.209912926 4121694.712987803 4340448.620390676 4539377.569640043 4569780.578181245 4133936.5210634475 4591984.73118174 4169187.7211829233 3964697.234865254 3786356.0000706287 1.3526235276919 1.0885650247654788 1.1463392824947551 1.1988776463584956 1.2069072686498583 1.0917981618702348 1.2127715225657818 1.101108221494533 1.0471010213491014 1.0 21.852378631551982 -8.330299036713528 0.02567126238070216 1.9597544185111392e-07 2.1686279438949674 0.48498680691198337 0.06920230953086956 280.9251460908445 3.5246646718679564 156.1788862921023 140.42405866002062 4.674131896113913e-09 8.330299036713528 2.1686277479195257 LISDS(ph)VER ddPTM_KYSE-520_SHP099_60min_R1 3 LISDSVER 8 0 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LIS(0.006)DS(0.994)VER;LIS(0.027)DS(0.973)VER;LIS(0.007)DS(0.993)VER 111.06 0.0020914 682900000.0 2068270.0 1979150.0 2045280.0 1909400.0 1991160.0 1936720.0 1856940.0 1962230.0 2275210.0 1998430.0 True False 1953538.940105974 1884068.6632352835 2177122.0213637026 2090868.8019179555 2147852.9638493476 1924632.2120901921 2044657.617187948 1955423.4821179232 1862089.217376662 1980725.4649550156 0.9862744608831194 0.9512013131401189 1.0991538503864025 1.05560757354399 1.0843769123239537 0.9716804504928717 1.0322771395451233 0.9872259011737061 0.9401046486868648 1.0 20.9175975011442 -7.391980801028981 3.737707212594109 0.9681400079733488 1.0271192400564941 0.19862691231554686 0.046552698008297366 0.39977889102979064 9.805485100820766 0.03066193645482023 0.013204812517916437 4.055264622676997e-08 7.391980801028981 0.05897923208314537 LISHCYIPQS(ph)PEPDLHK ddPTM_KYSE-520_SHP099_60min_R1 4 LISHCYIPQSPEPDLHK 17 0 A0A087WTF0;A2A3K4;A2A3K4-2 A0A087WTF0 PTPDC1 Protein tyrosine phosphatase domain-containing protein 1 1 LISHCYIPQS(1)PEPDLHK;LISHCYIPQS(1)PEPDLHK;LISHCYIPQS(1)PEPDLHK;LISHCYIPQS(1)PEPDLHK 187.07 2.1124e-12 2803630000.0 1750474.0 1959939.0 1818987.0 1933744.0 2239881.0 2989384.0 2899660.0 3116460.0 3962210.0 3337810.0 True False 1653371.7177365946 1865780.5885115822 1936241.8125021043 2117526.4483586648 2416146.891520443 2970726.1456003077 3192785.9307544758 3105649.7276472286 3242772.543185898 3308239.6001768867 0.4997738729831392 0.5639798847737092 0.5852785911874631 0.6400765072292357 0.7303421709211313 0.8979779292411189 0.9651011766450538 0.9387620314686923 0.980210908246341 1.0 21.657632295208533 -6.013887645519207 1.0115433506443319 0.9829824599282917 0.532842119826948 0.9865320611738447 0.021618708527475005 0.05560881632443709 0.12234936941931748 0.01135977615302427 0.013273355773880972 9.685283877183503e-07 6.013887645519207 -0.45014034010134374 LISWYDNEFGYSNR ddPTM_KYSE-520_SHP099_60min_R1 6 LISWYDNEFGYSNR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;;;; 202.61 1.0224999999999999e-11 1486357000.0 919804.0 1016680.0 802158.0 777556.0 1035498.0 1040147.0 874335.0 901950.0 918040.0 779734.0 False True 868780.6385361837 967837.1667322074 853866.3881781803 851454.6884592635 1116985.8014223217 1033655.0567500612 962721.3144872894 898821.3459667133 751347.0779051052 772826.163383872 1.1241604900281437 1.2523348879578124 1.1048621651723955 1.1017415413721388 1.445326069877763 1.337500081808996 1.24571522044744 1.1630317250533584 0.9722070932682724 1.0 19.559784410672133 -7.649012813680064 3.435724723574697 0.9831178346384387 1.2325984975227007 0.4723675714914283 0.10149284965695136 0.2288235654854199 4.990109087160109 0.09139184282867796 0.029016014934622848 2.2438157199461746e-08 7.649012813680064 0.24948066288426196 LITS(ph)EEERS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 1 LITSEEERSPAK 12 1 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 LIT(0.419)S(0.581)EEERS(1)PAK 102.72 0.001547 0.0 554470.0 552670.0 467090.0 493930.0 516330.0 500900.0 476160.0 514980.0 589070.0 511520.0 True False 523712.4437914577 526118.9036254168 497199.3687704236 540872.9586945303 556962.2334841667 497773.6973005791 524294.8996737717 513193.654577235 482109.7372462632 506988.33075653797 1.0329871754838296 1.0377337538328186 0.9806919382710306 1.0668351239710567 1.0985701241940946 0.9818247622342537 1.0341360300964098 1.0122395791860481 0.9509286663991843 1.0 18.951593015840146 -7.563638614167794 5.103814014704232 0.9758234853369174 1.032698856905069 0.3028670041698033 0.03470969160690669 0.24473858121083042 15.151716129425463 0.02495261068026766 0.009166390105826478 2.7312495693193198e-08 7.563638614167794 0.05687537156815159 LITS(ph)GCK ddPTM_KYSE-520_SHP099_60min_R1 2 LITSGCK 7 0 O75410;O75410-9;O75410-7;O75410-3;E7EVI4;E5RFM9;R4GMT7 O75410 TACC1 Transforming acidic coiled-coil-containing protein 1 1 LIT(0.029)S(0.971)GCK;LIT(0.011)S(0.989)GCK 76.17 0.038615 0.0 1951970.0 1868400.0 1816650.0 1624380.0 1715660.0 1752290.0 1557580.0 1825290.0 2231280.0 1834260.0 True False 1843690.3329442758 1778639.2594744253 1933754.1657427733 1778760.5868123462 1850672.6812299204 1741353.3081310256 1715035.3869158975 1818958.495015889 1826135.797991483 1818009.8834326845 1.014125583004589 0.9783441089528505 1.0636653757302714 0.9784108452995703 1.0179662377497989 0.9578348962784958 0.9433586706787561 1.0005217857129651 1.0044696756782507 1.0 20.793928611947813 -6.245756448555316 24.738938065500435 0.9789022203759088 1.009886489037951 0.20412863743330179 0.028695735136787918 1164.4678861943053 1836884.3766531325 0.009566717946296582 0.00953471106946496 5.678629725075808e-07 6.245756448555316 0.03098426866204229 LITSEEERS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 7 LITSEEERSPAK 12 1 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LIT(0.01)S(0.01)EEERS(0.981)PAK;LIT(0.046)S(0.234)EEERS(0.72)PAK;LITS(0.005)EEERS(0.995)PAK;LITSEEERS(1)PAK;LITSEEERS(1)PAK;LITSEEERS(1)PAK;LITSEEERS(1)PAK 200.0 2.4378e-08 11120640000.0 10521530.0 8693110.0 7855450.0 8640590.0 9046740.0 8950740.0 8622290.0 9454020.0 10407760.0 8998250.0 True False 9937879.75674994 8275479.946975876 8361824.876164389 9461789.075711893 9758666.969090607 8894875.111551588 9493915.218641149 9421226.21120485 8517973.142278794 8918532.505532557 1.1142954012428654 0.9278970438065043 0.9375785613807184 1.0609132242151194 1.0942009756691335 0.9973473893865058 1.0645154023659897 1.0563650696300595 0.9550868527972199 1.0 23.088374911626314 -4.207799585001496 22.621415824113303 1.0153948258847627 1.1142973648874015 0.2385362794834337 0.05503155655003972 31721.013087983494 13376286.068777345 0.014561643704064585 15.864263813172473 6.197269961200788e-05 4.207799585001496 0.09890253900263879 LITSEEERS(ph)PAKR ddPTM_KYSE-520_SHP099_60min_R1 9 LITSEEERSPAKR 13 2 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LITSEEERS(1)PAKR;LITSEEERS(1)PAKR;LITSEEERS(1)PAKR;LITSEEERS(1)PAKR;LITSEEERS(1)PAKR;LIT(0.028)S(0.046)EEERS(0.926)PAKR;LITSEEERS(1)PAKR;LITS(0.001)EEERS(0.999)PAKR;LITSEEERS(1)PAKR 303.44 3.3935e-31 28136370000.0 13330250.0 11839430.0 10677560.0 10851930.0 11618460.0 11156760.0 10155920.0 10716200.0 13085700.0 10518170.0 True False 12590794.459305447 11270646.011453254 11365852.602300044 11883294.164448261 12532766.702005412 11087126.522449998 11182579.505827582 10679028.003379885 10709666.743652582 10424987.196812423 1.2077515513069645 1.0811184511477772 1.0902509890635936 1.139885732241641 1.2021853327395424 1.0635146416141434 1.0726708143341224 1.024368452619792 1.0273074241210776 1.0 23.313542276072692 -6.74750237196635 1.7368514707894145 1.0216015596060755 1.136261894760929 0.6147305803452882 0.04225779991492197 0.270009976258217 1.6657144899372742 0.023271517950940474 0.014543706678220353 1.7885357607169625e-07 6.74750237196635 0.11466033515485363 LIVPS(ph)PDVLK ddPTM_KYSE-520_SHP099_60min_R1 1 LIVPSPDVLK 10 0 A0A0A0MR97;Q9UIF8-4;Q9UIF8-2;Q9UIF8-5;Q9UIF8-3;Q9UIF8 A0A0A0MR97 BAZ2B Bromodomain adjacent to zinc finger domain protein 2B 1 LIVPS(1)PDVLK 105.03 0.0013774000000000002 23492000.0 168990.0 200670.0 160850.0 124440.0 135280.0 163200.0 141610.0 196420.0 200650.0 187600.0 True False 159615.78782678675 191029.51198818925 171218.64836909948 136266.7401857497 145925.76636209048 162181.4082640338 155925.32078041614 195738.66486477247 164217.0179748804 185938.00995059166 0.8584354961591802 1.027382793001552 0.9208372640677208 0.7328611305561414 0.7848086918907359 0.8722337531047547 0.8385876605963964 1.0527092600205041 0.8831815400117327 1.0 17.504462194462366 -7.2438424991316595 24.691745295355638 0.9759590582715291 0.8632139961239966 0.29139747105300806 0.08318532227151539 968.4287007943645 1358890.9162430537 0.04265516638462273 0.024552994354922513 5.703710850709998e-08 7.2438424991316595 -0.11274506214753244 LIY(ph)LVPEK ddPTM_KYSE-520_SHP099_60min_R1 2 LIYLVPEK 8 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3;E7EPJ2 A0A087WVF7 ITSN2 Intersectin-2 1 LIY(1)LVPEK;LIY(1)LVPEK 107.9 0.005981 255070000.0 533070.0 530540.0 421570.0 375870.0 398890.0 457360.0 375450.0 429950.0 519290.0 455490.0 True False 503499.5444513 505052.0620432245 448745.07673584885 411592.57179056416 430280.3736263616 454505.44659092155 413404.1500388893 428458.6038010847 425000.026235613 451454.71296585765 1.1152825078367903 1.1187214299420112 0.9939979888299145 0.9117029016854938 0.9530975339688227 1.0067575629126162 0.9157156591034503 0.9490622015800905 0.941401239215227 1.0 18.78422174751066 -4.84035192469731 3.6869747773843162 0.9523846808842399 1.1197209163872057 0.8277722515640001 0.029258926281008863 0.07872610077148576 2.0706260012739492 0.0077063800460831396 0.018700097020428397 1.4442689524941794e-05 4.84035192469731 0.16733623550296584 LKAEVDNRS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 7 LKAEVDNRSPQK 12 2 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK;LKAEVDNRS(1)PQK 188.44 7.0068e-08 25441730000.0 15831810.0 14371070.0 14281730.0 12887810.0 14492080.0 13970740.0 13089070.0 13767750.0 17271390.0 13040390.0 True False 14953587.939369226 13680662.225784147 15202353.167375946 14112663.587538619 15632524.247344198 13883543.429477131 14412240.932612931 13719992.888666997 14135340.952310853 12924862.289869897 1.156963037903265 1.0584764401324895 1.176210069123218 1.09190049928808 1.2094925188948806 1.0741734123046416 1.1150788773903453 1.061519463880114 1.0936550529741187 1.0 23.623645573395446 -8.029303018765049 0.5902842418097309 1.0003274880955375 1.1319160349131767 0.4326566681143502 0.04462875539946584 0.8490760140975372 0.6991120834263962 0.044981383147711204 0.01959457918255678 9.347532444637932e-09 8.029303018765049 0.1315885468176392 LKATVT(ph)PS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 10 LKATVTPSPVK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 LKAT(0.134)VT(0.866)PS(1)PVK;LKAT(0.003)VT(0.997)PS(1)PVK;LKAT(0.007)VT(0.993)PS(1)PVK;LKAT(0.168)VT(0.834)PS(0.998)PVK;LKAT(0.365)VT(0.635)PS(1)PVK;LKATVT(1)PS(1)PVK;LKAT(0.006)VT(0.994)PS(1)PVK;LKAT(0.002)VT(0.998)PS(1)PVK;LKAT(0.039)VT(0.961)PS(1)PVK;LKAT(0.082)VT(0.918)PS(1)PVK 127.87 0.00019239 20885610000.0 44738700.0 39915200.0 36632200.0 35125300.0 35037000.0 36592200.0 33654730.0 33826680.0 40591900.0 34154550.0 True False 42256955.12661265 37997613.87806337 38993570.22559231 38463597.95119349 37794212.56673976 36363814.506612636 37056878.5469126 33709343.14228649 33221434.198527563 33851967.25883783 1.248286541325911 1.1224639793465248 1.1518849090051673 1.1362293262632084 1.1164554271767684 1.0742009239394805 1.0946742995338938 0.9957868293012099 0.9813738133595279 1.0 25.012736340614474 -6.345620464283074 0.46422871867999993 0.9744858342227956 1.20252288719132 0.8246089134952925 0.0329167511816369 0.4663786932457398 0.21390497876952402 0.031723214509154926 0.04229239941033385 4.512108514482561e-07 6.345620464283074 0.2280370529685245 LKATVT(ph)PS(ph)PVKGK ddPTM_KYSE-520_SHP099_60min_R1 3 LKATVTPSPVKGK 13 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 LKAT(0.008)VT(0.992)PS(1)PVKGK;LKAT(0.018)VT(0.982)PS(1)PVKGK;LKAT(0.136)VT(0.87)PS(0.994)PVKGK 95.554 0.0059554 31965500000.0 33394100.0 33010100.0 31949900.0 23241000.0 23615900.0 24915300.0 20931000.0 20631200.0 32636600.0 21528600.0 True False 31541662.703512035 31424245.246829707 34009441.675647475 25449817.652338553 25474336.9739096 24759794.370838728 23046909.74687441 20559635.182558276 26710616.141734254 21337873.352997348 1.4782008582444488 1.4726980860262495 1.593853385153312 1.1927063785278114 1.1938554771828376 1.1603684191592927 1.0800940358771505 0.9635278475242355 1.2517937331361184 1.0 24.34691306080634 -5.388707077933433 3.778568746283287 1.1125140772119209 1.5102181644814567 0.8133764623763525 0.08710299197901704 0.09940655047836053 2.503205233674216 0.025665520614483434 0.03936767957051059 4.0859488166649185e-06 5.388707077933433 0.3977040872695359 LKATVT(ph)PSPVK ddPTM_KYSE-520_SHP099_60min_R1 2 LKATVTPSPVK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKATVT(0.662)PS(0.338)PVK;LKATVT(0.798)PS(0.202)PVK 124.16 0.00053783 35331750000.0 12565230.0 12650310.0 10485410.0 7221610.0 7618950.0 9863970.0 8485170.0 8894800.0 11610500.0 9285630.0 True False 11868211.64373501 12042570.119097566 11161316.305849189 7907949.643143783 8218518.019104441 9802405.304376116 9342933.790878903 8863946.01486193 9502325.87688686 9203366.542310815 1.2895511212308073 1.308496196879047 1.212742777823425 0.8592453214580136 0.8929904053393167 1.0650890909659338 1.015164803871111 0.9631199598659403 1.0324836931357273 1.0 23.133730257175944 -5.099945455879147 4.875103482600223 0.9767237972458402 1.291396629548993 0.8425330998651074 0.05907128927002195 0.08497098524146078 3.196229640746327 0.017533113565364297 0.0316719207664457 7.944280026418054e-06 5.099945455879147 0.3146728323031527 LKATVTPS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 4 LKATVTPSPVK 11 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKATVT(0.014)PS(0.986)PVK;LKAT(0.051)VT(0.038)PS(0.911)PVK;LKATVT(0.004)PS(0.996)PVK;LKATVT(0.092)PS(0.908)PVK 124.12 0.00020027 67312700000.0 58891400.0 59313100.0 53922100.0 37168900.0 38628000.0 52205500.0 40960500.0 43861900.0 58534800.0 47696800.0 True False 55624576.644904666 56463609.64522185 57398004.84441051 40701421.08076274 41667803.836744756 51879666.10985307 45101187.07595665 43709753.30634445 47906355.862227924 47274243.459548935 1.1766359982577161 1.1943842040229784 1.2141496223736326 0.8609639859300899 0.8814060424340491 1.0974192776716742 0.9540329738866853 0.924599742008468 1.0133711796619203 1.0 25.494551034795027 -5.248935653018928 24.830954614881627 0.9605349018849904 1.194989393812487 0.7346803233518189 0.06426522703542142 366.72983769133924 728281.6011511553 0.018155058229478514 0.031163607197784344 5.637211730476931e-06 5.248935653018928 0.23445449192749657 LKATVTPS(ph)PVKGK ddPTM_KYSE-520_SHP099_60min_R1 3 LKATVTPSPVKGK 13 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 LKAT(0.169)VT(0.169)PS(0.662)PVKGK;LKAT(0.002)VT(0.286)PS(0.711)PVKGK;LKATVT(0.04)PS(0.96)PVKGK 190.24 1.8451e-08 89443500000.0 27801100.0 29040500.0 29168000.0 16134000.0 17850200.0 18828000.0 15889400.0 14812700.0 29368500.0 17327200.0 True False 26258917.562881142 27645350.789320827 31048215.950450115 17667370.509136017 19254909.18625505 18710487.468108017 17495655.617600016 14761318.201010171 24035920.71963758 17173694.4883576 1.5290197214514676 1.6097497721333158 1.807893809424544 1.0287460581712975 1.121186195510136 1.089485286977257 1.018747342306612 0.8595307323661296 1.3995777516557095 1.0 24.033697096485838 -5.268988370107722 24.989671602422213 1.06836538312393 1.6449739728625346 0.770704659661265 0.14369556766509334 243.77907687049262 806989.639478609 0.039120000020472126 0.05931665951898338 5.382841969370718e-06 5.268988370107722 0.5766085897386046 LKDDEVAQLK ddPTM_KYSE-520_SHP099_60min_R1 5 LKDDEVAQLK 10 1 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 ;;;; 147.62 0.00019590000000000002 4341710000.0 9354300.0 8518900.0 6215970.0 6111560.0 8982100.0 8921700.0 7299580.0 8825900.0 7636200.0 7974870.0 False True 8835398.331665264 8109639.256870408 6616661.372103648 6692400.824892488 9688940.168841904 8866016.360963412 8037492.783435551 8795285.012880538 6249658.572936868 7904218.856154979 1.1178079064429218 1.025988703558666 0.8371050311886651 0.8466871865119405 1.2257935091583618 1.1216815377093823 1.0168611129962315 1.11273298132828 0.79067377645677 1.0 22.914191462896333 -4.300611400918053 4.826936907264209 1.0021959673406693 1.1210004117203247 0.07067376465797215 0.13157471661245335 0.5270064987247017 29.21687710766842 0.034565178721224714 0.18060805142144426 5.0048215733734234e-05 4.300611400918053 0.11880444437965543 LKDDEVAQLKK ddPTM_KYSE-520_SHP099_60min_R1 3 LKDDEVAQLKK 11 2 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 ;; 163.99 1.2064000000000002e-05 16739550000.0 27716400.0 23341000.0 16797820.0 14022870.0 24604200.0 22803300.0 15940710.0 20341590.0 21149600.0 18228890.0 False True 26178916.040726382 22219663.32444474 17880634.354662284 15355599.3486704 26540410.561251763 22660976.14624538 17552152.533137366 20271029.77205281 17309365.77802908 18067396.216461807 1.448958982638234 1.2298210023312415 0.989663044992097 0.849906603292366 1.4689670964911872 1.2542469249441826 0.9714821285175013 1.121967411861107 0.9580442898716053 1.0 24.106885271340076 -4.416570768108293 3.277588997976043 1.0900290556269958 1.450437162950416 0.31817295265237144 0.1675716062477415 0.35467216474230695 6.370431628434692 0.04517483223663576 0.25425136129477066 3.832032924923787e-05 4.416570768108293 0.3604081073234202 LKDIALGMQTEIEEQDDILDR ddPTM_KYSE-520_SHP099_60min_R1 1 LKDIALGMQTEIEEQDDILDR 21 1 O95721;C9JAF7 O95721 SNAP29 Synaptosomal-associated protein 29;Synaptosomal-associated protein 0 77.28699999999999 0.010323 23568000.0 26570.0 16343.0 25259.0 27091.0 31937.0 14437.0 17420.0 21034.0 19353.0 23325.0 False True 25096.109134018137 15557.857748656877 26887.23555582896 29665.72049479383 34450.260203326994 14346.893327866766 19180.983602816505 20961.03796337251 15838.983049428663 23118.358646575394 1.0855489145089336 0.6729654983945635 1.1630252807680126 1.2832104972637546 1.490168948842319 0.6205844258754081 0.8296862202048177 0.9066836570803674 0.6851257605078702 1.0 14.496751352798746 -6.28440383723322 24.993687696049644 0.8039131419640574 1.1224422185941516 0.3695733232631857 0.21529117561214123 1006.9923504029057 1095970.5591130492 0.08171598111960549 0.0721116982448769 5.195126928072936e-07 6.28440383723322 0.3185290766300942 LKDLFDYS(ph)PPLHK ddPTM_KYSE-520_SHP099_60min_R1 13 LKDLFDYSPPLHK 13 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 LKDLFDY(0.198)S(0.802)PPLHK;LKDLFDY(0.002)S(0.998)PPLHK;LKDLFDY(0.003)S(0.997)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDYS(1)PPLHK;LKDLFDY(0.004)S(0.996)PPLHK;LKDLFDY(0.002)S(0.998)PPLHK;LKDLFDYS(1)PPLHK 149.95 4.0287e-06 212650455000.0 17608787.0 16342130.0 15662201.0 15022963.0 15927964.0 16038896.0 14277584.0 15005958.0 18627943.0 13779968.0 True False 16631992.482863385 15557029.544762779 16671811.53686764 16450740.886701468 17181404.149081796 15938791.300737625 15720901.526511788 14953905.834114911 15245578.123429088 13657888.204172889 1.2177572575079227 1.1390508775734192 1.220672719503877 1.2044864213835986 1.2579839498050929 1.1670026187407108 1.1510492172361309 1.0948915096219671 1.1162471017130682 1.0 23.703231094186897 -7.707782087116533 0.7276658308213247 1.006334547649371 1.205434165376543 0.7844859501593613 0.03309548936208186 0.2965553490467801 0.34684016072983315 0.032984160461442466 0.01373047878413825 1.9598277958283125e-08 7.707782087116533 0.199099617727172 LKDLFGK ddPTM_KYSE-520_SHP099_60min_R1 4 LKDLFGK 7 1 P11940;P11940-2;E7ERJ7;E7EQV3;A0A087WTT1;Q9H361;H0YAP2;H0YBN4 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 ;;; 103.56 0.004817 906796000.0 3043490.0 2805280.0 1975510.0 1738280.0 2853430.0 2804610.0 1936060.0 2210480.0 2314770.0 2288020.0 False True 2874661.542653103 2670510.1379888733 2102854.5355277583 1903485.6085670595 3077978.7072041654 2787105.388672744 2131775.8389247363 2202812.3608099106 1894466.1186031078 2267749.9228526223 1.2676272254204473 1.177603452249098 0.9272867851683396 0.8393719207683396 1.357283127291368 1.22901796207177 0.9400400888309399 0.971364760554803 0.8353946347929062 1.0 21.11283012452826 -6.789509956962613 21.256122269856295 0.9343124637715238 1.1225505785326497 0.2904462321330641 0.14977853929900406 63.63951234317825 48187.68281510097 0.06838477570919435 0.046132434118132726 1.623641125235566e-07 6.789509956962613 0.18823811476112595 LKDLGHPVEEEDELES(ph)GDQEDEDDES(ph)EDPGKDLDHI ddPTM_KYSE-520_SHP099_60min_R1 1 LKDLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI 36 2 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 2 LKDLGHPVEEEDELES(1)GDQEDEDDES(1)EDPGKDLDHI 95.296 0.00064071 824930000.0 57374.0 60287.0 61083.0 47006.0 38903.0 62693.0 45525.0 38873.0 64714.0 59865.0 True False 54191.349847766534 57390.72202736809 65020.50791625559 51473.43610713078 41964.444772208735 62301.70973221246 50127.11128118379 38738.1586360264 52963.56890718371 59334.64267426526 0.9133172023174669 0.9672380154445541 1.095827074803577 0.8675106782004088 0.7072503158497934 1.0500056446658956 0.8448203110680401 0.6528759067226673 0.8926247217488541 1.0 15.856587051292054 -5.44173404067974 9.083697166082342 0.8439419050689704 0.9888865693169476 0.20189134498428662 0.11916302596756835 0.6079794818176197 64.1987130959447 0.033804848727625965 0.0501384346837881 3.616312556417598e-06 5.44173404067974 0.14494466424797725 LKDLGHPVEEEDELES(ph)GDQEDEDDESEDPGK ddPTM_KYSE-520_SHP099_60min_R1 1 LKDLGHPVEEEDELESGDQEDEDDESEDPGK 31 1 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 1 LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGK 155.11 2.4738000000000004e-07 2238700000.0 619190.0 546650.0 457980.0 560570.0 529000.0 616150.0 613860.0 573600.0 526910.0 546400.0 True False 584842.2963753361 520388.1134616212 487502.12359390815 613846.4042584837 570629.2904017282 612304.3793007624 675914.9594962655 571610.3154792463 431236.42632018105 541559.3210927668 1.0799228701211019 0.9609069462816631 0.9001823154113916 1.1334795291120736 1.0536782734166656 1.1306321495219491 1.2480903442533198 1.0554897556298026 0.7962865922980062 1.0 19.046759850237077 -3.883978381789684 18.717668652757137 1.041135867506498 6.84047797870868 0.008238861047157986 0.1215229808578576 2636.4445382272647 424849.1619165988 0.03089449192127656 750.103846494083 0.0001306235908022598 3.883978381789684 5.799342111202183 LKDLGHPVEEEDELES(ph)GDQEDEDDESEDPGKDLDHI ddPTM_KYSE-520_SHP099_60min_R1 14 LKDLGHPVEEEDELESGDQEDEDDESEDPGKDLDHI 36 2 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 1 LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI;LKDLGHPVEEEDELES(1)GDQEDEDDESEDPGKDLDHI 321.48 8.744699999999998e-68 75138460000.0 8608512.0 8121995.0 7017781.0 7435077.0 7606497.0 7366328.0 7323568.0 7442498.0 9375946.0 7310017.0 True False 8130980.678716785 7731802.168836964 7470158.39210661 8141704.482642594 8205085.038852307 7320352.014551362 8063905.724575875 7416681.711530095 7673510.554764549 7245255.93648716 1.1222489239847429 1.067153767460381 1.0310413403737528 1.1237290378716525 1.1324769077557966 1.0103648620176435 1.1129911483134765 1.0236604167672854 1.059108280236271 1.0 22.788605222774994 -7.869581204805905 0.6267481000899043 1.0006582098817534 1.0876484645339959 0.30272364104992255 0.04055439763448814 1.0067121814174524 0.9412371236595352 0.04087225860807365 0.01807451972954554 1.350264330507898e-08 7.869581204805905 0.08699025465224253 LKDPANFQYPAESVLAYK ddPTM_KYSE-520_SHP099_60min_R1 2 LKDPANFQYPAESVLAYK 18 1 B4DLR8;P15559-3;P15559-2;P15559;H3BNV2;H3BRK3 B4DLR8 NQO1 NAD(P)H dehydrogenase [quinone] 1 0 ; 189.48 1.982e-12 3159800000.0 1712550.0 1611800.0 1234260.0 1166050.0 1660720.0 1663140.0 1200250.0 1331580.0 1321800.0 1156950.0 False True 1617551.437616212 1534366.7086388764 1313822.3744858252 1276871.041414285 1791409.2157957598 1652759.7263495426 1321582.9833111663 1326961.0597731075 1081794.4398664176 1146700.3230934786 1.410613919818657 1.3380712272754767 1.145741697308934 1.1135176433626897 1.562229625054117 1.4413179215741883 1.152509471477171 1.1571995167781375 0.9433976934340064 1.0 20.129056978222955 -7.326658751505015 1.7890096047153698 0.9842721296675433 1.3219450325557256 0.5172866447941624 0.1329584468388087 0.345260402339038 2.0049959515092644 0.11427760974251373 0.042815741178263055 4.713475440035147e-08 7.326658751505015 0.3376729028881823 LKDRDPEFYK ddPTM_KYSE-520_SHP099_60min_R1 2 LKDRDPEFYK 10 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 0 ; 134.2 0.00019636 1400350000.0 1913630.0 1656940.0 1286210.0 1218900.0 1876340.0 1711740.0 1421260.0 1509340.0 1694260.0 1399490.0 False True 1807477.1291731705 1577338.1152823537 1369121.1546087642 1334743.8895243516 2023997.283085783 1701056.3957222875 1564934.8309609073 1504104.4518226048 1386625.0928189429 1387091.6073867455 1.3030697608923059 1.1371549700700945 0.9870445090415929 0.9622608070125837 1.4591662672510548 1.2263475509934385 1.1282130341118675 1.08435841137869 0.9996636742913602 1.0 20.4036316397242 -7.4641703870293705 2.0728874601781557 0.9988317461591808 1.170066769066696 0.2100592156807567 0.13542489126130433 0.6271230334799461 4.916890384892229 0.12111338744357972 0.04149209226200845 3.4342318602973817e-08 7.4641703870293705 0.17123502290751513 LKDVLLQVDDER ddPTM_KYSE-520_SHP099_60min_R1 2 LKDVLLQVDDER 12 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 103.76 0.0010446 71226000.0 236920.0 222659.0 176253.0 155699.0 226480.0 227510.0 178858.0 201732.0 195309.0 198261.0 False True 223777.5753116889 211962.12742202735 187614.55039477078 170496.5861473887 244302.68750507248 226090.0256994504 196938.71212586408 201032.23877660284 159845.808939227 196504.56178472415 1.1387907399159671 1.0786626300016249 0.9547592620282647 0.8676469624871719 1.243241812231883 1.1505586620789898 1.002209365203519 1.023041078287225 0.8134457922373437 1.0 17.584203278970605 -7.594400541903337 6.800040717231088 0.9071533769898641 1.058306068153493 0.2422493454283512 0.10829442183864656 0.3336080607454029 25.432233970831426 0.07859495608691841 0.02910201692261241 2.544482440194058e-08 7.594400541903337 0.15115269116362895 LKDVLLQVDDERR ddPTM_KYSE-520_SHP099_60min_R1 4 LKDVLLQVDDERR 13 2 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ;;; 175.01 2.7996e-07 4378470000.0 2026620.0 1835380.0 1425630.0 1158170.0 2079550.0 1685500.0 1320840.0 1489670.0 1631540.0 1356880.0 False True 1914199.3486331897 1747205.5898384533 1517528.3908886502 1268242.128583493 2243198.7539790403 1674980.16929552 1454363.3973561528 1484502.6824615905 1335293.4637764087 1344859.098836666 1.4233456503279907 1.2991737136996926 1.1283921060588036 0.9430297416885914 1.6679805013918996 1.2454688901940854 1.0814243652842224 1.103835103428842 0.9928872585473588 1.0 20.359023598568577 -6.76756151247839 4.312595340827799 1.0486908022284218 1.2817823273224163 0.3065226578104937 0.17799236241549943 0.2971880023537858 12.986853270068371 0.0782711053310753 0.05493822173402935 1.7078058132141765e-07 6.76756151247839 0.23309152509399444 LKDYAFIHFDER ddPTM_KYSE-520_SHP099_60min_R1 2 LKDYAFIHFDER 12 1 O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 ; 130.07 6.8858e-05 915780000.0 2401510.0 2510610.0 1926090.0 1669090.0 2551890.0 1941580.0 1685280.0 1707810.0 2078050.0 1613110.0 False True 2268293.4530085027 2389996.52709756 2050248.8432529597 1827719.811769794 2752709.224732069 1929461.8790274698 1855644.5491477975 1701886.0057158484 1700728.503377526 1598819.1003805897 1.4187305195869555 1.4948511226370982 1.2823519826382546 1.143168611967868 1.7217139975853442 1.2068043711562944 1.1606344637151707 1.064464394571421 1.063740421272599 1.0 20.608575282534023 -6.603175474729835 3.326983218814721 1.0754217659977192 1.3992455109459936 0.5439142414255391 0.1455583798666773 0.20458361759242957 4.541620855896526 0.06012182068121652 0.04556849025733402 2.493587000773725e-07 6.603175474729835 0.3238237449482744 LKDYAFVHFEDR ddPTM_KYSE-520_SHP099_60min_R1 3 LKDYAFVHFEDR 12 1 B4DT28;O43390-4;O43390-3;O43390;O43390-2 B4DT28 HNRNPR Heterogeneous nuclear ribonucleoprotein R 0 ;; 127.32 8.4584e-05 1624230000.0 2599350.0 2573770.0 1781710.0 1611150.0 2425350.0 2175410.0 1867700.0 1955730.0 2048040.0 1804680.0 False True 2455158.8738242383 2450122.2258924707 1896561.8774367932 1764273.2115900882 2616211.2466461817 2161832.4592626314 2056505.3429954308 1948946.0291008153 1676167.5628869862 1788691.939219795 1.3726001778121435 1.369784350323166 1.0603066049842265 0.9863482765845314 1.4626393675074874 1.2086108355839047 1.149725840377216 1.0895928954378367 0.9370912487133528 1.0 20.770473507284283 -7.310532770567925 1.6674997330418233 0.9718053635316706 1.2373610401570647 0.38266452856869504 0.13687366354780214 0.4687435514249586 2.3473031544578844 0.11717811680942701 0.04400022717971817 4.8917835180049094e-08 7.310532770567925 0.26555567662539414 LKDYEDLR ddPTM_KYSE-520_SHP099_60min_R1 1 LKDYEDLR 8 1 P11047 P11047 LAMC1 Laminin subunit gamma-1 0 63.283 0.033979 447900000.0 1054300.0 840250.0 634250.0 601840.0 972350.0 1013300.0 785170.0 866460.0 778370.0 839550.0 False True 995815.8773050566 799883.1287590362 675134.7698358811 659038.6926502053 1048868.413085293 1006975.618835451 864542.6461207481 863454.4524932845 637037.6291109272 832112.2401600166 1.1967326392333317 0.9612683123195224 0.8113506054255992 0.7920069683429619 1.2604891052721372 1.2101439808670618 1.0389735956227433 1.0376658470103033 0.7655669492236093 1.0 19.666418615063797 -7.727055261688404 24.565640955282756 0.8827834129210956 1.0333376139523798 0.13388970446775017 0.1580502665136798 297.8803052185707 212820.42039485494 0.11595041248538585 0.04381973784857962 1.8747559400574472e-08 7.727055261688404 0.15055420103128414 LKEDILENEDEQNS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 12 LKEDILENEDEQNSPPK 17 1 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK;LKEDILENEDEQNS(1)PPK 187.86 2.0086e-12 35181430000.0 18669790.0 18686180.0 15733730.0 15385070.0 16565710.0 16981130.0 16690230.0 17513710.0 20132640.0 17883310.0 True False 17634139.531396348 17788467.864272013 16747951.410658065 16847262.427110054 17869337.131003436 16875144.468839668 18377441.32934767 17452959.02774064 16477060.078553703 17724877.786404666 0.994880740160707 1.003587617281972 0.9448838865057833 0.950486803357947 1.00815008974051 0.9520598489984083 1.0368162506284548 0.984658920533004 0.9296007722655181 1.0 24.07927234428249 -5.76233279105589 24.99999942271151 0.9853696292569827 0.9735706222771365 0.031140956648779916 0.03211058665262431 117.67314813914462 3292813.606256349 0.010014245802321327 0.0120017349968374 1.7284913437432258e-06 5.76233279105589 -0.01179900697984615 LKEDILENEDEQNS(ph)PPKK ddPTM_KYSE-520_SHP099_60min_R1 11 LKEDILENEDEQNSPPKK 18 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK;LKEDILENEDEQNS(1)PPKK 221.83 1.2026e-18 51380560000.0 13805960.0 13413760.0 12468470.0 12751390.0 12636880.0 12461070.0 12161640.0 13262430.0 15318630.0 13070540.0 True False 13040115.87730107 12769342.835135758 13272207.526457349 13963278.271754786 13631330.56198827 12383295.839930786 13391057.257368388 13216425.725804446 12537152.943237176 12954745.184326231 1.0065899168034682 0.9856884603631734 1.0245054871874446 1.0778504766460992 1.0522268379682704 0.9558888008783967 1.0336797109348044 1.0201995900154655 0.9677653064458347 1.0 23.626977302660894 -9.33956087126361 9.244168130158215 0.9999992916998341 1.015388915462481 0.011874983913786163 0.035308777961035216 0.0 0.0 0.035691265692331886 0.008656403433027544 4.5755059952133697e-10 9.33956087126361 0.015389623762646742 LKEEEDEYET(ph)S(ph)GEGQDIWDMLDK ddPTM_KYSE-520_SHP099_60min_R1 1 LKEEEDEYETSGEGQDIWDMLDK 23 1 G3V554;G3V4W8;G3V5H9;G3V2U6;Q9BRS7;G3V2F4;E7EPD8;Q9NUW8;G3V2J6 G3V554 TDP1 Tyrosyl-DNA phosphodiesterase 1 2 LKEEEDEY(0.025)ET(0.982)S(0.994)GEGQDIWDMLDK 65.558 0.018744999999999998 28188000.0 45270.0 40716.0 34450.0 37327.0 36901.0 41316.0 33014.0 39147.0 46798.0 40656.0 True False 42758.782856492355 38759.94224403805 36670.70212194891 40874.54685722821 39804.898762030585 41058.13151860798 36351.37730559039 39011.20819397846 38300.66288157716 40295.819469889364 1.0611220573003464 0.9618849487103995 0.9100373836385364 1.0143619709178837 0.9878170809201283 1.018917894182255 0.9021128688734964 0.9681204826502954 0.9504872561332804 1.0 15.298342552225618 -6.739966185055361 24.9974034432251 0.9525234706216269 0.9880238693442187 0.14453238854163253 0.04335819558338733 503.48452848389076 586116.7889390206 0.016731418354398366 0.012947333612492382 1.8198425492875245e-07 6.739966185055361 0.03550039872259181 LKEEEDEYET(ph)SGEGQDIWDMLDK ddPTM_KYSE-520_SHP099_60min_R1 3 LKEEEDEYETSGEGQDIWDMLDK 23 1 G3V554;G3V4W8;G3V5H9;G3V2U6;Q9BRS7;G3V2F4;E7EPD8;Q9NUW8;G3V2J6 G3V554 TDP1 Tyrosyl-DNA phosphodiesterase 1 1 LKEEEDEY(0.001)ET(0.5)S(0.5)GEGQDIWDMLDK;LKEEEDEYET(0.583)S(0.417)GEGQDIWDMLDK;LKEEEDEY(0.01)ET(0.537)S(0.453)GEGQDIWDMLDK 135.41 3.3442e-06 297998000.0 325084.0 335810.0 259154.0 286000.0 304379.0 337622.0 305886.0 310087.0 380480.0 304324.0 True False 307050.9424811125 319677.1835389133 275859.4815010605 313181.35401096445 328331.89562039246 335514.7758634782 336807.94203967456 309011.38057185 311394.4231202713 301627.92612048954 1.0179791587283489 1.0598394772346569 0.9145687703693076 1.0383035750007437 1.088532815390693 1.1123465263274463 1.1166338156140485 1.0244786832118822 1.0323792863790748 1.0 18.20241048066414 -5.5182056708053056 24.626009033456825 1.0683367731638769 0.9991561715900801 0.25701318985039623 0.048739642136511815 214.58989178434865 1130840.989133869 0.014699392848678333 0.01949889938659799 3.0324547507575415e-06 5.5182056708053056 -0.0691806015737968 LKEEEDEYETS(ph)GEGQDIWDMLDK ddPTM_KYSE-520_SHP099_60min_R1 4 LKEEEDEYETSGEGQDIWDMLDK 23 1 G3V554;G3V4W8;G3V5H9;G3V2U6;Q9BRS7;G3V2F4;E7EPD8;Q9NUW8;G3V2J6 G3V554 TDP1 Tyrosyl-DNA phosphodiesterase 1 1 LKEEEDEYET(0.17)S(0.83)GEGQDIWDMLDK;LKEEEDEYET(0.078)S(0.922)GEGQDIWDMLDK;LKEEEDEYET(0.183)S(0.817)GEGQDIWDMLDK;LKEEEDEYET(0.169)S(0.831)GEGQDIWDMLDK 120.13 9.9775e-05 256568000.0 228603.0 293095.0 217069.0 203586.0 245691.0 265874.0 266230.0 272286.0 368033.0 231793.0 True False 215921.93588121774 279014.2762554357 231061.6150626801 222934.7522296371 265025.4839094346 264214.5817450475 293143.1265544108 271341.5034180302 301207.48455693555 229739.49435222492 0.939855537203269 1.2144811106255209 1.0057548690710887 0.9703806167860928 1.1535913085240406 1.1500616491301539 1.2759805508450308 1.1810834013677387 1.311082734843751 1.0 17.809639365145976 -5.936121024219847 5.197878859063632 1.196142275699109 1.0439151368883441 0.31965813990451086 0.10362087096150539 0.23799121686852875 12.612188788651547 0.03163223881620164 0.03583230721712632 1.1584544863216234e-06 5.936121024219847 -0.15222713881076477 LKEEEEDK ddPTM_KYSE-520_SHP099_60min_R1 2 LKEEEEDK 8 1 P27797 P27797 CALR Calreticulin 0 ; 152.97 0.00039273 2785500000.0 2272710.0 2060290.0 1467130.0 1359960.0 2248830.0 2475460.0 1793950.0 2444360.0 2037220.0 2296380.0 False True 2146638.2457649354 1961310.5758416606 1561703.5472909994 1489210.1895131164 2425800.126907598 2460009.735914736 1975299.973264792 2435881.085677913 1667312.2021369862 2276035.859756608 0.9431478140219153 0.861722176930638 0.6861506775460045 0.6542999676957496 1.0658004866263424 1.0808308337364252 0.8678685640199114 1.070229660589969 0.7325509371874673 1.0 21.118091857322568 -5.768521624401489 24.9999441525431 0.9735385221411307 0.7845596212681992 0.3387232380727141 0.1253278569980926 192.84640940087453 680736.1938790209 0.0394588984432602 0.045689912746109645 1.7040344698770447e-06 5.768521624401489 -0.18897890087293145 LKEEEEDKK ddPTM_KYSE-520_SHP099_60min_R1 7 LKEEEEDKK 9 2 P27797 P27797 CALR Calreticulin 0 ;;;;;; 113.63 0.0005846 30227500000.0 31730690.0 31816010.0 17772710.0 18266090.0 32872800.0 33227600.0 21956290.0 30425110.0 28730540.0 30490640.0 False True 29970525.37213765 30287521.122795336 18918367.32394145 20002093.70169979 35459702.33935338 33020214.22324756 24175846.065940518 30319572.394684076 23513798.17397471 30220516.650958963 0.9917277629066154 1.0022171848552512 0.6260107178988659 0.6618713350509539 1.173365192557956 1.092642280230499 0.799981229479522 1.0032777647341105 0.77807399673389 1.0 24.84902498928757 LKEEEEDKKR ddPTM_KYSE-520_SHP099_60min_R1 8 LKEEEEDKKR 10 3 P27797 P27797 CALR Calreticulin 0 ;;;;;;; 223.71 1.1034000000000001e-09 45279020000.0 33050560.0 29986390.0 21763950.0 20387670.0 33785770.0 30950230.0 25450740.0 29476230.0 30975360.0 19626780.0 False True 31217179.552142046 28545798.81391095 23166889.04055124 22325308.027023483 36444517.88426463 30757058.134165097 28023549.174485993 29373983.837933775 25351015.449281823 19452901.998603787 1.6047569434309918 1.4674313794394171 1.1909220044502369 1.1476595126334292 1.8734746048111692 1.5811038443710175 1.440584503869775 1.510005234182646 1.3031996691856755 1.0 24.213482057813305 -8.077338588115154 3.1158090211215734 1.0003359129647635 1.471187424480699 0.36175566080950494 0.19446949335166971 0.4045852482791282 9.24079171692978 0.20050650917169108 0.05342548408560595 8.36876575359704e-09 8.077338588115154 0.4708515115159355 LKEEHGIELS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 LKEEHGIELSSPR 13 1 O14647;O14647-2 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 1 LKEEHGIELS(0.5)S(0.5)PR;LKEEHGIELS(0.886)S(0.114)PR 98.281 0.0010834000000000002 892010000.0 698400.0 657630.0 509330.0 611060.0 558260.0 564120.0 586280.0 624430.0 680300.0 587040.0 True False 659658.3597741171 626036.4676772448 542162.2267568137 669134.958678112 602191.8859351011 560599.1178303112 645546.9039414042 622263.9980730582 556774.6689674116 581839.2823102096 1.1337466888707215 1.075961157506501 0.9318075338676739 1.1500340025535787 1.0349797688875197 0.9634947912152584 1.1094935037356737 1.0694774605151118 0.9569217581128621 1.0 19.15026117630817 -4.522808806876453 24.999999999999996 1.0327958227950211 1.119300340626864 0.20194457603597593 0.0655896648576955 3.3475281927051803 1195748.2865198134 0.016332856040072525 0.04418196166352567 3.0004831562811248e-05 4.522808806876453 0.08650451783184288 LKEEHGIELSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 LKEEHGIELSSPR 13 1 O14647;O14647-2 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 1 LKEEHGIELS(0.286)S(0.714)PR 113.33 9.3856e-05 605320000.0 1050000.0 988000.0 873780.0 997500.0 923750.0 943090.0 964180.0 982910.0 1035500.0 957180.0 True False 991754.4068768932 940534.9969817657 930105.2568974304 1092302.1000906895 996443.869581467 937203.8254885261 1061648.7238899893 979500.5146229186 847479.3028307436 948700.1298747704 1.0453823875915418 0.9913933469218745 0.9803996306190086 1.1513670818563868 1.0503254276069287 0.9878820461553413 1.1190561595370796 1.0324658801851474 0.8933057729660182 1.0 19.855592619103682 -7.6447956730570175 7.3275453795094885 0.9478198453240032 1.0459568909502601 0.3211930814019439 0.05731402538472379 0.2572502553043051 15.136354837340406 0.03968666345256692 0.014723032744183963 2.2657100285193238e-08 7.6447956730570175 0.09813704562625691 LKEEIER ddPTM_KYSE-520_SHP099_60min_R1 1 LKEEIER 7 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;E9PGZ1;C9J813;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 0 98.58200000000001 0.037646 0.0 347210.0 287810.0 251000.0 200180.0 311460.0 355540.0 253250.0 268330.0 296940.0 293610.0 False True 327949.5691540246 273983.17558838276 267179.8616141995 219205.04701368857 335970.13003501366 353320.9429791338 278850.98148181883 267399.22585869284 243023.18124824835 291008.84382512345 1.126940215435858 0.9414943270694138 0.9181159517432275 0.75325905609046 1.1545014427015452 1.2141244174402333 0.9582216740099807 0.9188697578530692 0.8351058272108348 1.0 18.15070347206787 -6.996946674611682 24.955948099103008 0.9139017843594079 1.011042614308407 0.10741688017712092 0.1299330544070965 235.72518249907392 1926659.3744839318 0.05974708096858991 0.040037508394727195 1.007055313800401e-07 6.996946674611682 0.09714082994899909 LKEELEEAR ddPTM_KYSE-520_SHP099_60min_R1 2 LKEELEEAR 9 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ; 141.88 0.00043209 756040000.0 1430070.0 1296750.0 866860.0 779050.0 1292440.0 1300200.0 911040.0 1081370.0 1093990.0 1097180.0 False True 1350741.166326131 1234452.183538567 922739.1826250406 853090.6777700762 1394147.675022325 1292084.9695152992 1003136.8140935668 1077618.9798636567 895348.9932436543 1087459.838793123 1.242106713407643 1.1351703662993 0.848527136090937 0.7844801686808475 1.2820222184660799 1.1881679887592649 0.9224587228957909 0.9909506001247939 0.8233398248870728 1.0 20.052530690796907 -6.801058858832405 24.972194328075716 0.9334329727401401 1.0678011716432727 0.17077757053377574 0.1560872091419752 349.5340422356149 220308.62377309863 0.07147025079057126 0.04818598304038812 1.5810337512453278e-07 6.801058858832405 0.13436819890313256 LKEENFFNPK ddPTM_KYSE-520_SHP099_60min_R1 1 LKEENFFNPK 10 1 F8W930;Q9Y6M1-1;Q9Y6M1;Q9Y6M1-5;Q9Y6M1-6;Q9Y6M1-3;Q9Y6M1-4 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 0 121.08 0.0020356 0.0 257910.0 235850.0 187340.0 155530.0 281650.0 278020.0 194630.0 230380.0 219870.0 234960.0 False True 243603.21816916126 224519.4119819325 199416.23615459807 170311.52443820031 303814.25263071223 276284.77405371703 214305.09980575097 229580.8655510964 179947.15047165207 232878.43719611378 1.0460531301316482 0.9641056281774087 0.85631043627566 0.7313323057676481 1.3046044807268322 1.1863905365400984 0.9202444948790099 0.9858399442871544 0.7727085110937656 1.0 17.829217537384476 -7.559294510409783 24.272434666131137 0.8839938258849497 0.9991411425242034 0.07447226830527787 0.15999597708475405 382.01538608196097 254618.77410230844 0.11529654696312384 0.04357829044542436 2.758706445591294e-08 7.559294510409783 0.1151473166392537 LKEFLEDYDDDRDDPK ddPTM_KYSE-520_SHP099_60min_R1 8 LKEFLEDYDDDRDDPK 16 2 P49756 P49756 RBM25 RNA-binding protein 25 0 ;;;;;;; 166.76 3.1902e-08 5226932000.0 6935820.0 6997270.0 4512049.0 3868520.0 6125090.0 6920700.0 5077830.0 5392600.0 5677010.0 6066270.0 False True 6551076.23838561 6661110.646083601 4802902.898073653 4236182.977687047 6607099.736005144 6877505.344196686 5591146.611245105 5373894.329242304 4646208.089776108 6012527.567286639 1.0895710938656054 1.1078719509455253 0.7988159462595411 0.7045594270096247 1.098888888585475 1.143862588109579 0.9299161706410776 0.8937829006358237 0.7727545591733346 1.0 22.519540172942246 -7.102697823535288 4.341918826955889 0.8769424700068554 0.9827780896933888 0.08852315918283182 0.14307048933411035 0.6441914013018046 20.387439230319853 0.07731831822303857 0.043556396553022216 7.89409187247044e-08 7.102697823535288 0.10583561968653332 LKEGHETPMDIDS(ph)DDSK ddPTM_KYSE-520_SHP099_60min_R1 4 LKEGHETPMDIDSDDSK 17 1 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 LKEGHETPMDIDS(0.997)DDS(0.003)K;LKEGHETPMDIDS(1)DDSK;LKEGHETPMDIDS(1)DDSK;LKEGHETPMDIDS(1)DDSK 221.14 2.124e-18 2329040000.0 1577430.0 1856860.0 1528580.0 3244160.0 1742570.0 1681340.0 1400480.0 1484970.0 2050970.0 1490500.0 True False 1489926.8133712567 1767653.658396316 1627114.7126144734 3552483.9910077327 1879700.3451329654 1670846.1333985922 1542054.1857676504 1479818.9856646045 1678565.5487462776 1477295.3295914512 1.0085504120447593 1.1965472461658455 1.1014146460914183 2.4047216015975486 1.272393073667132 1.1310170010898686 1.0438360934872164 1.0017082948971694 1.1362423715307406 1.0 20.494526836825518 -6.194519531738621 4.2528128937707725 1.0594974580583452 1.4328455679421577 0.1783877313484068 0.3633321685296561 0.4186901227386822 14.998254293473343 0.1313484977891448 0.12953816873285962 6.389699999910467e-07 6.194519531738621 0.3733481098838125 LKEHEDYCGAR ddPTM_KYSE-520_SHP099_60min_R1 1 LKEHEDYCGAR 11 1 O14545;F8VNX8;F8VVF3;O14545-2 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 0 159.99 2.1554e-05 747990000.0 929710.0 829650.0 542040.0 533600.0 849260.0 720520.0 584580.0 715240.0 630860.0 634090.0 False True 878137.1329690629 789792.3686699622 576980.7656946637 584313.1835673095 916091.9303715917 716022.9674166774 643675.0513510024 712758.9993782708 516311.72668643395 628472.4559145547 1.3972563549999906 1.256685732584182 0.918068501275907 0.9297355485802724 1.4576484963664675 1.139306839429771 1.0241897561195819 1.13411334525562 0.8215343756554866 1.0 19.261489991419495 -4.5579666002557975 6.155876332190221 1.070093167710809 1.3654030263520374 0.31733417384834106 0.16489472546876377 0.1941645700562261 20.738865848518607 0.043653504194146896 0.12330104487350681 2.7671544473253057e-05 4.5579666002557975 0.2953098586412284 LKEQNVAFS(ph)PLKR ddPTM_KYSE-520_SHP099_60min_R1 2 LKEQNVAFSPLKR 13 2 Q12882 Q12882 DPYD Dihydropyrimidine dehydrogenase [NADP(+)] 1 LKEQNVAFS(1)PLKR;LKEQNVAFS(1)PLKR 113.29 0.00010848 2500400000.0 3063000.0 2590000.0 2595000.0 2404820.0 2480600.0 2601600.0 2450280.0 2262930.0 3050700.0 2361440.0 True False 2893089.284060877 2465572.5123307393 2762277.852146804 2633373.3697645026 2675809.107316687 2585362.4493854824 2697978.2148283147 2255080.424001834 2496769.7818887024 2340519.4787725187 1.236088530900906 1.0534296059880708 1.1801986171016512 1.1251234581245915 1.143254363650932 1.1046105246436022 1.1527262384687629 0.9634956873695864 1.066758813388782 1.0 21.15839734112968 -7.252082485556297 24.96414197271924 1.0113454368929455 1.1381888725335914 0.5884239551650132 0.05055438998837828 416.86188751745385 1112188.8080640926 0.02210031061604105 0.012539372568402376 5.596512968225071e-08 7.252082485556297 0.12684343564064582 LKEQSIFGDHRDEEEETHMK ddPTM_KYSE-520_SHP099_60min_R1 2 LKEQSIFGDHRDEEEETHMK 20 2 Q16643;Q16643-2;Q16643-3;D6R9W4 Q16643 DBN1 Drebrin 0 ; 168.2 3.0389e-09 2710000000.0 2168360.0 2287700.0 1887050.0 2170710.0 2037790.0 2206400.0 1800690.0 1959460.0 2187910.0 1430490.0 False True 2048076.7482815061 2177795.4580922937 2008692.2623867516 2377013.6257522395 2198152.4795609396 2192629.0391774783 1982721.3182408523 1952663.0906014037 1790640.696722754 1417816.9715043802 1.4445283061525116 1.536020164705417 1.4167500479666433 1.6765306619443974 1.5503781685082958 1.546482432673225 1.3984324902932133 1.37723213210625 1.2629561732659949 1.0 20.435239873872085 -7.92983090790555 0.869094517776099 1.0029258446327773 1.5311118992281092 0.8429427211140488 0.07047376282248902 0.2233988196355077 0.38276342941163255 0.06901836026327181 0.024859250257362707 1.1753550891169254e-08 7.92983090790555 0.5281860545953319 LKERPS(ph)SREDTPSR ddPTM_KYSE-520_SHP099_60min_R1 2 LKERPSSREDTPSR 14 3 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;A0A3B3IT83;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 LKERPS(0.5)S(0.5)REDTPSR;LKERPS(0.43)S(0.43)REDT(0.116)PS(0.023)R 125.45 8.709299999999999e-05 1769870000.0 584790.0 580190.0 521050.0 407450.0 474090.0 410040.0 406830.0 338510.0 674770.0 312370.0 True False 552350.532950037 552316.8015170551 554637.7167094768 446173.9254956911 511398.1857968906 407480.78826338495 447956.34667817724 337335.7878188283 552248.7775674555 309602.6448201828 1.7840627080910183 1.7839537573648334 1.79145018942461 1.4411179392696365 1.6517888149628392 1.3161411734710786 1.446875064450274 1.0895765700411018 1.7837340436423001 1.0 18.240058270378643 -1.0000000001148135 0.09515771117677599 0.7589027021840122 3.873425713156282 0.5259483995815495 0.19565959040296557 104.46028632703214 0.7110219619999092 2.832749555177833 42.44476145224474 0.09999999997356322 1.0000000001148135 3.11452301097227 LKERPSS(ph)REDTPSR ddPTM_KYSE-520_SHP099_60min_R1 1 LKERPSSREDTPSR 14 3 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;A0A3B3IT83;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 LKERPS(0.295)S(0.421)REDT(0.283)PS(0.001)R 106.16 0.00076278 607900000.0 233350.0 238970.0 243780.0 207270.0 198840.0 180570.0 176720.0 180720.0 273520.0 182850.0 True False 220405.6103283078 227489.52249871695 259494.44886179105 226968.87848200224 214487.57675515985 179442.99565095932 194584.58222099504 180093.1245003652 223855.66287809287 181230.0912551475 1.2161645386913504 1.2552524855182157 1.4318507873863944 1.25237965124931 1.1835097321293642 0.9901390790469106 1.0736880441507157 0.9937263908719132 1.2352014024146483 1.0 17.467462993288358 -5.935582574339717 2.7492320905261844 1.0597717172959817 1.2988416741959474 0.6171334501197647 0.08536223324471393 0.17816227776642024 2.7350543150928215 0.02864326466718392 0.03244043045662154 1.1598916598255518e-06 5.935582574339717 0.23906995689996569 LKETAESVLK ddPTM_KYSE-520_SHP099_60min_R1 1 LKETAESVLK 10 1 P34932;A0A087WYC1;A0A087WTS8 P34932 HSPA4 Heat shock 70 kDa protein 4 0 103.75 0.0065355000000000005 0.0 762760.0 702570.0 443480.0 406000.0 604940.0 622450.0 463550.0 548970.0 580780.0 533500.0 False True 720448.182275638 668817.48262093 472067.43039308855 444586.11793164903 652545.3363622325 618565.0586638962 510410.15781203134 547065.7512005613 475324.99227236974 528773.6050567194 1.3624889279379944 1.2648465737036716 0.8927590671672271 0.8407872739486686 1.2340732028260688 1.1698107710908627 0.9652716265163835 1.0345935310857277 0.8989196656693625 1.0 19.012290637658776 -4.625827397284722 5.501020745879562 1.0133665854521616 1.3387437972985543 0.5360231573637175 0.11611849146281493 0.1572128973351407 6.917892847008795 0.032101197190730964 0.0888668410533795 2.3668601775983785e-05 4.625827397284722 0.3253772118463927 LKETCVSGEDPTQGADLS(ph)PDEK ddPTM_KYSE-520_SHP099_60min_R1 11 LKETCVSGEDPTQGADLSPDEK 22 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPT(0.001)QGADLS(0.999)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPT(0.003)QGADLS(0.997)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK;LKETCVSGEDPTQGADLS(1)PDEK 224.41 5.9929e-20 68006300000.0 30589990.0 27597060.0 26108880.0 25368130.0 26973260.0 26941030.0 26495050.0 26297010.0 32518400.0 28371530.0 True False 28893102.275066774 26271255.81356843 27791900.18048501 27779109.447993595 29095902.105144266 26772881.038502328 29173428.220769446 26205791.810078282 26613878.28215474 28120180.316916365 1.0274863798681062 0.9342491946171599 0.9883258168073029 0.9878709572599152 1.0346982763706154 0.9520878151124964 1.037455232931756 0.9319211866615792 0.9464334148008476 1.0 24.74510250974172 -9.952036174718597 4.444814812356058 1.0000003195292897 0.9820056853853355 0.018514175652733833 0.038656959704125644 8301475.83956142 18587181.924863927 15.87620034758475 0.009063916577855354 1.1167702221199301e-10 9.952036174718597 -0.01799463414395419 LKFDFQAQS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 LKFDFQAQSPK 11 1 O60504-2;O60504;E5RIA0;E5RJP2 O60504-2 SORBS3 Vinexin 1 LKFDFQAQS(1)PK;LKFDFQAQS(1)PK 127.66 0.00011133 2051320000.0 3619100.0 3322300.0 3494200.0 3253900.0 3346400.0 3192300.0 2972200.0 3220100.0 4123800.0 3169600.0 True False 3418341.3085030154 3162691.7211260335 3719441.7229176764 3563149.67767929 3609742.641588549 3172375.67157644 3272658.981876646 3208930.2246769937 3375021.8725383105 3141519.809911482 1.0881170628681578 1.0067393849141917 1.1839625238659497 1.1342120671776659 1.14904341210895 1.0098219535549666 1.0417438628116942 1.0214578989929752 1.07432773840551 1.0 21.583031246836473 -6.268288066376955 24.93252002384385 1.0315785058460256 1.1117298520234695 0.43619318985945854 0.04711653964443888 561.3119288744066 2043440.5806448245 0.01732117532134368 0.015603153615542754 5.391528852076343e-07 6.268288066376955 0.0801513461774439 LKFS(ph)DDEEEEEVVK ddPTM_KYSE-520_SHP099_60min_R1 17 LKFSDDEEEEEVVK 14 1 Q5JSZ5;Q5JSZ5-5 Q5JSZ5 PRRC2B Protein PRRC2B 1 LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK;LKFS(1)DDEEEEEVVK 247.36 7.4961e-19 19970850000.0 23085870.0 21023450.0 18385080.0 19634360.0 21063880.0 19619170.0 19857190.0 21638050.0 23800940.0 20623970.0 True False 21805250.770559113 20013451.905158203 19570211.673968084 21500403.67111443 22721487.518917102 19496719.482668404 21864548.552698735 21562992.654908855 19479289.26887143 20441257.67100587 1.0667274549103671 0.9790714557424481 0.9573878471150389 1.0518141308697881 1.1115503695814928 0.9537925599520615 1.0696283420814992 1.0548760258276118 0.9529398622326987 1.0 24.284980626627213 -5.2887677656329615 24.980845939352857 1.0322354642075005 0.9988631490423167 0.04477374695267866 0.05364949715436813 2032.0172812481826 1857461.9018076477 0.015045981080176778 0.02232446120518193 5.14318604479462e-06 5.2887677656329615 -0.0333723151651838 LKFS(ph)DDEEEEEVVKDGRPK ddPTM_KYSE-520_SHP099_60min_R1 7 LKFSDDEEEEEVVKDGRPK 19 3 Q5JSZ5;Q5JSZ5-5 Q5JSZ5 PRRC2B Protein PRRC2B 1 LKFS(1)DDEEEEEVVKDGRPK;LKFS(1)DDEEEEEVVKDGRPK;LKFS(1)DDEEEEEVVKDGRPK;LKFS(1)DDEEEEEVVKDGRPK;LKFS(1)DDEEEEEVVKDGRPK;LKFS(1)DDEEEEEVVKDGRPK;LKFS(1)DDEEEEEVVKDGRPK 228.64 1.7817999999999998e-19 15735650000.0 12267630.0 12693370.0 13323400.0 10425720.0 11348310.0 9580520.0 8753520.0 9055190.0 16312840.0 8556560.0 True False 11587120.108985892 12083561.452063207 14182247.682193724 11416577.294192972 12241357.433948636 9520724.420966553 9638411.227722533 9023779.659387229 13350839.469231727 8480755.535302946 1.3662839425982796 1.4248213383539727 1.6722858739598265 1.3461745532775993 1.4434276973309024 1.1226269147052423 1.136503839498804 1.0640301588489174 1.574251187132564 1.0 23.015761366952265 -6.251405890828376 22.68389795159007 1.180798145363127 1.455681292015513 0.4008345767896816 0.16567364266910944 204.75982853874982 462923.9543192048 0.05399348387317164 0.05325761027947926 5.605238665743592e-07 6.251405890828376 0.274883146652386 LKFS(ph)DEEDGRDS(ph)DEEGAEGHR ddPTM_KYSE-520_SHP099_60min_R1 7 LKFSDEEDGRDSDEEGAEGHR 21 2 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 2 LKFS(1)DEEDGRDS(1)DEEGAEGHR;LKFS(1)DEEDGRDS(1)DEEGAEGHR;LKFS(1)DEEDGRDS(1)DEEGAEGHR;LKFS(1)DEEDGRDS(1)DEEGAEGHR;LKFS(1)DEEDGRDS(1)DEEGAEGHR;LKFS(1)DEEDGRDS(1)DEEGAEGHR;LKFS(1)DEEDGRDS(1)DEEGAEGHR 187.32 2.3738e-13 8445040000.0 4094280.0 3559340.0 3514520.0 3894430.0 3560090.0 3446470.0 3477196.0 4091010.0 4348090.0 3598230.0 True False 3867162.126655165 3388343.9637217377 3741071.5826308224 4264555.45629692 3840248.828858764 3424959.302326866 3828704.9058426647 4076819.241158916 3558586.4624290937 3566352.481580578 1.0843465828541072 0.9500866729303358 1.0489909794257943 1.1957750890643608 1.0768001336639605 0.9603535601194845 1.0735632345981165 1.143134129959051 0.9978224196313757 1.0 21.766017868556695 LKGDDLQAIK ddPTM_KYSE-520_SHP099_60min_R1 2 LKGDDLQAIK 10 1 P07910;G3V2Q1;P07910-3;G3V5V7;G3V576;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;P07910-2;G3V2D6;G3V4C1;B2R5W2;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 0 ; 109.6 0.0040415 0.0 5540800.0 4412200.0 3208700.0 3311100.0 5467000.0 5124700.0 4063000.0 5121400.0 4103000.0 4708100.0 False True 5233440.778689039 4200231.2891527815 3415537.9361015195 3625785.9484814825 5897221.797025049 5092714.84638906 4473727.691058755 5103635.058743742 3357998.62821298 4666389.896846373 1.121518110226042 0.9001029451035308 0.7319443963329767 0.7770002140052317 1.2637653362421546 1.0913607647382413 0.9587127929627521 1.093700949034042 0.7196138133425957 1.0 22.15387542502741 -4.249030318269948 23.25795230742667 0.9539090088256733 1.1215183470242696 0.0884701295501461 0.16581541572268982 2161.968141143443 4051918.2422594964 0.043681402591647704 0.6809270008573247 5.635983094311699e-05 4.249030318269948 0.16760933819859625 LKGDDLQAIKK ddPTM_KYSE-520_SHP099_60min_R1 3 LKGDDLQAIKK 11 2 P07910;G3V2Q1;P07910-3;G3V5V7;G3V576;P07910-2;G3V2D6;G3V4C1;B2R5W2;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 ;; 122.42 0.00013981 9475180000.0 17093100.0 14689000.0 11928660.0 9724370.0 16316500.0 14668200.0 10671600.0 13626100.0 14794500.0 13216100.0 False True 16144911.668749943 13983318.391361501 12697600.510130828 10648571.20106156 17600515.721814375 14576650.322907493 11750389.472779376 13578834.23945564 12108191.738995112 13099015.63597021 1.232528620274002 1.0675090999176284 0.9693553212703184 0.8129291159726788 1.343651783534248 1.112805017415176 0.8970437015520866 1.0366301267835605 0.9243589041718316 1.0 23.642955064488532 -6.748791465588975 24.979158833625046 0.9675606851000228 1.0822628356183306 0.16407946377289573 0.13784237568539595 490.6707500884466 969057.4045451473 0.05554224756112595 0.04272624313355627 1.7832348146061506e-07 6.748791465588975 0.11470215051830779 LKGDNEKHS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 LKGDNEKHSPR 11 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 LKGDNEKHS(1)PR;LKGDNEKHS(1)PR 103.3 0.00072715 9903200000.0 14315200.0 13360600.0 12486500.0 13082300.0 14189100.0 12750200.0 12410500.0 13410900.0 15968900.0 10769300.0 True False 13521107.319356278 12718736.721330531 13291399.769106384 14325637.85866307 15305701.445064561 12670621.272353467 13665074.454807935 13364380.718027584 13069350.3032099 10673892.380388629 1.266745704144338 1.191574382434185 1.2452251995276773 1.342119383270518 1.4339381454872129 1.1870666127038596 1.2802334863254823 1.2520625318072578 1.2244221543045064 1.0 23.347583034738623 -8.63055921162884 0.8949208387096483 0.9980140035458206 1.2804827983344433 0.6010297942106999 0.06728745588751499 1.8191143055396917 1.9713235809597605 0.0768517529221772 0.02340328359148264 2.3412122529655805e-09 8.63055921162884 0.28246879478862275 LKGNKHDDGTQS(ph)DSENAGAHR ddPTM_KYSE-520_SHP099_60min_R1 2 LKGNKHDDGTQSDSENAGAHR 21 2 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 LKGNKHDDGT(0.016)QS(0.984)DSENAGAHR;LKGNKHDDGT(0.03)QS(0.97)DSENAGAHR 273.88 4.1941e-36 1696990000.0 750130.0 789430.0 952950.0 850360.0 747030.0 682720.0 569210.0 607880.0 1007010.0 486130.0 True False 708518.7935529179 751504.5978414131 1014378.6817739108 931177.9587299436 805817.010980723 678458.891237875 626751.3017542588 605771.4061602589 824162.3686562879 481823.26640341664 1.4704951855930006 1.559710064337574 2.105292028228045 1.9326131045533517 1.6724327511117651 1.4081073674632827 1.3007908614141064 1.2572481413819152 1.710507619958395 1.0 18.878144534917276 -6.232810253484768 3.1138227907328573 1.3412727888896394 1.778098688038115 0.4468962763696598 0.23182587806797234 0.2616954311191247 5.171636594975729 0.08691379353917326 0.08254196458643287 5.850456391395422e-07 6.232810253484768 0.4368258991484757 LKGSGNLEAIHIIK ddPTM_KYSE-520_SHP099_60min_R1 1 LKGSGNLEAIHIIK 14 1 P78371-2;P78371;F8VQ14;F5GWF6 P78371-2 CCT2 T-complex protein 1 subunit beta 0 73.156 0.018323 268790000.0 687770.0 647300.0 479680.0 412870.0 544030.0 461720.0 397540.0 455850.0 470200.0 375830.0 False True 649618.0270644963 616202.7363828917 510600.9403151367 452109.0406661078 586842.0658927262 458838.23421366216 437727.2228165136 454268.76274619024 384823.53277741716 372500.4385913151 1.7439389588939995 1.6542335861755908 1.3707391654250831 1.2137141163533887 1.5754130870610161 1.231779044204218 1.1751052548337033 1.2195120211511654 1.0330820930914988 1.0 18.506882598677766 -1.0000000000013922 0.19519167049099106 0.9709727563374082 4.604110843906501 0.7826140488815458 0.11364467465116307 25.430053524557444 0.30220285556002013 0.22875414129923075 28.064475460152128 0.09999999999967943 1.0000000000013922 3.633138087569092 LKGTS(ph)PSSSSR ddPTM_KYSE-520_SHP099_60min_R1 1 LKGTSPSSSSR 11 1 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 LKGT(0.202)S(0.761)PS(0.009)S(0.009)S(0.015)S(0.004)R 79.639 0.017284 1500100000.0 4134500.0 3629000.0 3329100.0 3346100.0 3267800.0 3562000.0 3443100.0 3451500.0 4131700.0 3423500.0 True False 3905151.0430785837 3454657.392759944 3543699.11274833 3664112.3379583536 3524957.268761374 3539768.236743186 3791162.149417767 3439527.552086159 3381487.4316811003 3393170.4534426997 1.1508856088017712 1.0181207929754486 1.0443622450952632 1.079849181829565 1.0388388432372926 1.0432037780924766 1.1172919844245568 1.013661883268029 0.9965569010098665 1.0 21.694202473926488 -1.0000000881787825 0.06260895423116285 0.9175768000212833 1.3363306751763142 0.30267231082610024 0.04047402241270656 463.9276494265099 2.1685856349727173 2.828338952620887 17.536234779333828 0.09999997969608705 1.0000000881787825 0.41875387515503093 LKGTSPSSS(ph)SRPQR ddPTM_KYSE-520_SHP099_60min_R1 3 LKGTSPSSSSRPQR 14 2 H3BVG0;Q8N1F7;Q8N1F7-2 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 LKGT(0.003)S(0.021)PS(0.025)S(0.183)S(0.384)S(0.384)RPQR;LKGTS(0.002)PS(0.002)S(0.062)S(0.467)S(0.467)RPQR;LKGT(0.006)S(0.237)PS(0.172)S(0.11)S(0.238)S(0.238)RPQR 116.96 9.541e-05 18642700000.0 10923490.0 10667260.0 8714420.0 8518660.0 8643260.0 7766850.0 7068670.0 7444360.0 11733790.0 7248050.0 True False 10317542.234262548 10154788.817716302 9276165.456764992 9328270.885171486 9323435.38857778 7718374.208183278 7783240.147171125 7418537.252686681 9603229.520774834 7183837.91589758 1.4362158995027146 1.4135604027540924 1.291254836949643 1.298507983389819 1.2978348756930256 1.0744081782667714 1.0834376051201111 1.0326704666136355 1.336782599106701 1.0 22.77632336921271 -5.711425297381273 0.9091256369813668 1.1012762081809162 1.4177931222649913 0.6201802494297501 0.09509187123245967 0.40926045124926247 0.7236227537512043 0.046263151762026104 0.079571679067791 1.9434559552596987e-06 5.711425297381273 0.3165169140840751 LKIS(ph)LGK ddPTM_KYSE-520_SHP099_60min_R1 2 LKISLGK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 LKIS(1)LGK;LKIS(1)LGK 73.499 0.037055000000000005 3196900000.0 3322600.0 3005370.0 3013100.0 2949700.0 2534040.0 2325700.0 2663530.0 2930470.0 3165100.0 2783590.0 True False 3138288.7545611085 2860987.5140476585 3207329.247130455 3230038.6011403534 2733454.5312846783 2311184.443625387 2932785.6059477543 2920304.8835468367 2590397.625678014 2758929.558200251 1.137502313255264 1.0369918672059115 1.162526689961128 1.1707579091825107 0.9907663365888215 0.8377105666782793 1.063015761758309 1.0584920063895566 0.9389140139438079 1.0 21.39567719117211 -5.796773472678365 10.753697474782236 0.9811878162917671 1.1230303910978725 0.5193663707285381 0.06851184132742599 0.4635136638909089 138.53992903406944 0.022290355623590864 0.025388470602189978 1.5967117724298305e-06 5.796773472678365 0.1418425748061054 LKIS(ph)PEQHWDFTAEDLK ddPTM_KYSE-520_SHP099_60min_R1 5 LKISPEQHWDFTAEDLK 17 1 P45985;P45985-2 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 1 LKIS(1)PEQHWDFTAEDLK;LKIS(1)PEQHWDFTAEDLK;LKIS(1)PEQHWDFTAEDLK;LKIS(1)PEQHWDFTAEDLK;LKIS(0.999)PEQHWDFT(0.001)AEDLK 182.17 1.3374e-09 1015385000.0 1524410.0 1404680.0 1322400.0 1514510.0 1599410.0 1490810.0 1549360.0 1578170.0 1592850.0 1494330.0 True False 1439847.9384640062 1337197.064332335 1407644.0199148112 1658448.5750459644 1725274.4676019414 1481505.3018021102 1705984.4290964298 1572695.6966176461 1303628.592480878 1481091.3987711465 0.9721533321026914 0.9028457429715682 0.9504099619258648 1.1197476242330286 1.1648669818982085 1.0002794581288548 1.1518427765577977 1.0618491862976878 0.8801810567278235 1.0 20.49822924201387 -5.163690142507208 6.482192233566033 1.0629272765095856 0.9356506645593122 0.28441978472441976 0.08081238847889667 0.291526279108501 16.350622656898224 0.02228088411735829 0.039006196494145697 6.859774784745732e-06 5.163690142507208 -0.1272766119502734 LKIS(ph)PEQHWDFTAEDLKDLGEIGR ddPTM_KYSE-520_SHP099_60min_R1 2 LKISPEQHWDFTAEDLKDLGEIGR 24 2 P45985;P45985-2 P45985 MAP2K4 Dual specificity mitogen-activated protein kinase kinase 4 1 LKIS(1)PEQHWDFTAEDLKDLGEIGR;LKIS(0.991)PEQHWDFT(0.009)AEDLKDLGEIGR 180.35 2.7485999999999998e-11 2172600000.0 919880.0 923420.0 956220.0 894040.0 866170.0 869670.0 727350.0 774340.0 1180100.0 773340.0 True False 868852.422664683 879057.5171183211 1017859.471206095 979009.2927970729 934332.6511668523 864242.0669422924 800877.6362519274 771653.9952723156 965823.587900107 766488.809249416 1.1335487383247076 1.1468628197965969 1.3279508571075338 1.2772649528383428 1.2189775504769567 1.1275338354758255 1.0448653999739235 1.0067387624718978 1.2600622164932709 1.0 19.547905203100736 -6.37791237864047 3.2550134119773775 1.0791345019095144 1.2264400801789193 0.3843291468814962 0.08574035976409305 0.2818151911635334 5.623667105831881 0.033224074035469085 0.02879014719544988 4.188780676042589e-07 6.37791237864047 0.14730557826940482 LKLDGLDEDGEK ddPTM_KYSE-520_SHP099_60min_R1 1 LKLDGLDEDGEK 12 1 A0A3B3IRQ7;P30533 A0A3B3IRQ7 LRPAP1 Alpha-2-macroglobulin receptor-associated protein 0 103.14 0.0043170000000000005 0.0 697300.0 670610.0 460210.0 366680.0 714440.0 711100.0 441090.0 607180.0 643020.0 499270.0 False True 658619.3789669116 638392.8889938676 489875.87296203506 401529.1569536381 770662.3633924582 706661.761130849 485679.6818235556 605073.8342968768 526263.7772150894 494846.8562261823 1.3309559729038127 1.2900817312701567 0.9899545016774338 0.8114210525975516 1.5573754863670537 1.428041326805664 0.9814747243772797 1.2227496783778948 1.0634881693065605 1.0 18.916622587614103 -7.877829467046367 1.2632236673532182 0.9995894398528279 1.2042718030114603 0.09457329718275731 0.21201949661898986 1.2500453763708141 4.377373377539736 0.21468274680987964 0.06741523886879336 1.3248616620429427e-08 7.877829467046367 0.20468236315863242 LKLEDDS(ph)EES(ph)DAEFDEGFKVPGFLFK ddPTM_KYSE-520_SHP099_60min_R1 2 LKLEDDSEESDAEFDEGFKVPGFLFK 26 2 Q03468 Q03468 ERCC6 DNA excision repair protein ERCC-6 2 LKLEDDS(1)EES(1)DAEFDEGFKVPGFLFK;LKLEDDS(1)EES(1)DAEFDEGFKVPGFLFK 195.08 1.2232e-15 312200000.0 368230.0 423970.0 353370.0 310620.0 304840.0 305200.0 289410.0 319510.0 464400.0 305820.0 True False 347803.54785169335 403601.84480805596 376148.79561199044 340141.23140869173 328829.1736976612 303295.13359180803 318666.38716941007 318401.6943841942 380076.66657131515 303110.6727243594 1.147447381926985 1.3315329387133805 1.2409618976170131 1.1221684421452456 1.0848485496803655 1.0006085594604464 1.0513202465133804 1.0504469919267412 1.2539204349196458 1.0 18.209485125686157 -5.374700188015517 2.8420505338371416 1.0723787362670185 1.251203512877326 0.4717176813260464 0.0785589038668301 0.22756735502175277 3.541408889933449 0.023246718551715593 0.03757915965842198 4.219877189994654e-06 5.374700188015517 0.1788247766103075 LKLEDFFAR ddPTM_KYSE-520_SHP099_60min_R1 4 LKLEDFFAR 9 1 P11413;P11413-3;P11413-2;E7EM57;E7EUI8;E9PD92 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;;; 125.74 0.00072318 7386510000.0 2632730.0 2269340.0 1885020.0 1436250.0 2780220.0 2332800.0 1703150.0 1628920.0 1544250.0 1463790.0 False True 2486687.2186828596 2160317.5000512125 2006531.4053386394 1572750.768175691 2999007.4967120853 2318240.1298917797 1875321.0231421909 1623269.6567127851 1263853.1273745778 1450821.9594113869 1.7139850982761067 1.4890300536446768 1.3830307656445382 1.0840411933203518 2.067109252970511 1.5978805082549985 1.2925921137167151 1.1188620672459093 0.8711290308063271 1.0 20.468439056313898 -7.17419335152988 2.1442672803623153 0.9595404706783524 1.5429777871621129 0.5250971256319664 0.23936634506616378 0.2884278240598358 2.532052415351784 0.1635548116855467 0.07410655666303353 6.695864375738262e-08 7.17419335152988 0.5834373164837605 LKLS(ph)PNKYQPIQPIQTSK ddPTM_KYSE-520_SHP099_60min_R1 2 LKLSPNKYQPIQPIQTSK 18 2 Q9C0D2-3;Q9C0D2;H0YDK0 Q9C0D2-3 CEP295 Centrosomal protein of 295 kDa 1 LKLS(1)PNKYQPIQPIQTSK;LKLS(0.989)PNKY(0.011)QPIQPIQTSK 157.9 2.3658000000000002e-07 983670000.0 1057730.0 954200.0 877200.0 707050.0 741270.0 819190.0 760410.0 827120.0 1098360.0 824980.0 True False 999055.6083675199 908358.7997166009 933745.7155696236 774247.8194176669 799603.731750641 814077.1313468992 837279.663686435 824250.9137712588 898925.511402391 817671.3190247274 1.2218303187632134 1.1109094554032302 1.1419572801982871 0.9468936984865096 0.9779036064324276 0.995604361319515 1.023980717197095 1.0080467476276154 1.0993726825035015 1.0 19.641161511118355 -5.179899534538288 6.525471497123653 1.0068790306633957 1.1555900031720625 0.7054415211972355 0.04468371330272853 0.14018346469758794 9.31980382114704 0.012405288886863137 0.0216825360549936 6.608463040837204e-06 5.179899534538288 0.14871097250866683 LKLS(ph)PS(ph)PSSR ddPTM_KYSE-520_SHP099_60min_R1 5 LKLSPSPSSR 10 1 Q03252;P20700 Q03252;P20700 LMNB2;LMNB1 Lamin-B2;Lamin-B1 2 LKLS(1)PS(0.993)PS(0.006)S(0.001)R;LKLS(0.997)PS(0.88)PS(0.11)S(0.013)R;LKLS(1)PS(0.778)PS(0.219)S(0.004)R;LKLS(0.998)PS(0.936)PS(0.062)S(0.004)R;LKLS(0.994)PS(0.749)PS(0.211)S(0.047)R 103.13 0.0010948 49639700000.0 50920200.0 49288100.0 44024200.0 42343000.0 43956300.0 41773500.0 43076200.0 44702900.0 52666100.0 41126900.0 True False 48095554.999097936 46920225.69305361 46862070.373210564 46367265.989112794 47415410.732864834 41512776.091406964 47430762.67919886 44547836.0736353 43103263.8443401 40762547.66224398 1.179895707148013 1.151062148564211 1.149635463453042 1.1374967623051724 1.1632101880811299 1.0184048464139026 1.1635868069927158 1.0928619192979792 1.0574232062600983 1.0 25.28074088707992 -7.171583324441834 0.019517541077900206 2.108712075738625e-07 2.1908043608406333 0.6135219079757273 0.038388380500567074 185.29289084486564 3.270070264231021 180.87423866527035 185.08944416728752 6.736226407419304e-08 7.171583324441834 2.1908041499694257 LKLS(ph)PSPS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 3 LKLSPSPSSR 10 1 Q03252;P20700 Q03252;P20700 LMNB2;LMNB1 Lamin-B2;Lamin-B1 2 LKLS(0.983)PS(0.018)PS(0.696)S(0.304)R;LKLS(0.938)PS(0.341)PS(0.412)S(0.308)R;LKLS(0.976)PS(0.026)PS(0.56)S(0.438)R 167.73 4.9328999999999995e-05 18959300000.0 15314600.0 14175300.0 13332400.0 13297700.0 12532600.0 12550000.0 13120900.0 13504700.0 15488900.0 12153900.0 True False 14465068.609101778 13494297.310440905 14191827.836594252 14561509.409900727 13518844.31926029 12471670.79481386 14447288.619643822 13457855.347720662 12676506.203394603 12046225.90159113 1.200796724822432 1.1202095511639465 1.178114037751834 1.2088026182521918 1.1222472855564372 1.035317691756597 1.199320744743426 1.1171843743975511 1.0523218065934015 1.0 23.52207788320518 -8.499857401850406 0.2236690340275939 0.9440942623435354 1.1974209332223358 0.5207444997961344 0.04901525638329024 4.652669828897192 0.572507727969278 0.3601030726974775 0.1474048511686535 3.163316146726959e-09 8.499857401850406 0.25332667087880034 LKLS(ph)PSPSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 LKLSPSPSSR 10 1 Q03252;P20700 Q03252;P20700 LMNB2;LMNB1 Lamin-B2;Lamin-B1 2 LKLS(0.999)PS(0.001)PS(0.343)S(0.657)R;LKLS(0.762)PS(0.263)PS(0.301)S(0.674)R;LKLS(0.903)PS(0.397)PS(0.288)S(0.412)R 195.94 3.0924e-10 39122400000.0 18809500.0 17032700.0 16202800.0 15481700.0 16081200.0 14894300.0 15576900.0 15645000.0 18875800.0 14381500.0 True False 17766099.539191343 16214423.52539607 17247258.41339661 16953076.11325715 17346698.950488232 14801339.148939941 17151565.06789394 15590731.146570463 15448430.540195622 14254091.098637683 1.24638599657114 1.1375277043757452 1.2099865430946346 1.1893480963424894 1.2169628235465761 1.0383923497131684 1.2032731479829801 1.0937723800615058 1.0837892387029915 1.0 23.76487271405961 -7.707466709087682 0.2984404497865681 0.976389385311203 1.2233458927016212 0.5892104917471768 0.05118094351760707 1.2018762673789236 0.3767162665776459 0.1118479991571312 0.08416008812310813 1.9612515097592373e-08 7.707466709087682 0.2469565073904182 LKLS(ph)PSPSSR ddPTM_KYSE-520_SHP099_60min_R1 4 LKLSPSPSSR 10 1 Q03252;P20700 Q03252;P20700 LMNB2;LMNB1 Lamin-B2;Lamin-B1 1 LKLS(0.995)PS(0.003)PS(0.001)SR;LKLS(0.817)PS(0.183)PSSR;LKLS(0.905)PS(0.095)PSSR;LKLS(0.827)PS(0.173)PSSR 142.1 0.00014875 29915800000.0 16487200.0 14296700.0 13630800.0 12236100.0 12799100.0 13027700.0 12307700.0 13171500.0 15926200.0 12363700.0 True False 15572622.149581632 13609865.0722158 14509463.178051108 13399015.2650824 13806316.353082703 12946389.291920045 13551882.427576616 13125811.140751215 13034403.54683049 12254167.23681306 1.2708021564125154 1.1106315761164132 1.1840431828335798 1.0934252002722857 1.1266629617724486 1.056488706391036 1.1058999086339427 1.0711304070765109 1.0636711002012036 1.0 23.54676910972661 -1.0000000000000002 0.21890452297751353 1.0241400420952427 2.097676110703638 0.7393977427841891 0.03627737342968171 26.004668788081073 0.3313034859441405 0.053584352442293225 9.850368379046099 0.09999999999999995 1.0000000000000002 1.0735360686083955 LKLSPS(ph)PS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 LKLSPSPSSR 10 1 Q03252;P20700 Q03252;P20700 LMNB2;LMNB1 Lamin-B2;Lamin-B1 2 LKLS(0.234)PS(0.767)PS(0.824)S(0.175)R 130.58 0.0011565999999999998 7604000000.0 5078200.0 4665500.0 4161600.0 4030300.0 4095000.0 3977200.0 4004300.0 4055000.0 4814300.0 3733100.0 True False 4796502.122859277 4441362.376941727 4429863.394795434 4413338.500246117 4417253.202637198 3952376.819532565 4409093.722201959 4040934.1514441185 3940144.4786267984 3700027.6383078494 1.2963422416630603 1.2003592435252497 1.197251433727496 1.192785279372802 1.1938432991428576 1.068201971956113 1.1916380506331543 1.0921362072020029 1.0648959585687752 1.0 21.819104616687586 -1.0000000000217055 0.09509356099600555 0.8915082588262779 1.9720433763697451 0.8014794576410111 0.03766270712663072 60.092862646411284 0.4087911414146808 0.5659162878478771 8.465433971252235 0.09999999999500211 1.0000000000217055 1.0805351175434672 LKLSPS(ph)PSSR ddPTM_KYSE-520_SHP099_60min_R1 4 LKLSPSPSSR 10 1 Q03252;P20700 Q03252;P20700 LMNB2;LMNB1 Lamin-B2;Lamin-B1 1 LKLS(0.233)PS(0.765)PS(0.003)SR;LKLS(0.306)PS(0.685)PS(0.009)SR;LKLS(0.404)PS(0.593)PS(0.002)SR;LKLS(0.31)PS(0.69)PSSR 167.3 4.1321000000000006e-05 38647700000.0 13204100.0 11357800.0 11359000.0 10387300.0 10530000.0 10565600.0 10644200.0 10530000.0 12377900.0 10302400.0 True False 12471642.251279214 10812154.239594636 12091219.315042602 11374505.868944364 11358651.09249564 10499656.171289673 11720219.613381129 10493473.887720471 10130385.381466601 10211128.75114591 1.2213774358568954 1.058859848220137 1.1841217175609213 1.1139322739092774 1.11237957813635 1.0282561729633841 1.1477888389239892 1.0276507273050373 0.9920926107537085 1.0 23.283639016585152 -6.67970468466993 0.39631606972490696 0.9847799695952913 1.1696468060472547 0.5373166791826317 0.05129557122940959 1.0459289842326998 0.3822677784781125 0.05543776960595383 0.06907221428693411 2.0907173117040848e-07 6.67970468466993 0.18486683645196333 LKMS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 4 LKMSPGR 7 1 Q9UGU0;Q9UGU0-2 Q9UGU0 TCF20 Transcription factor 20 1 LKMS(1)PGR;LKMS(1)PGR;LKMS(1)PGR;LKMS(1)PGR 74.267 0.014874 3105030000.0 7320890.0 6477420.0 6557400.0 5966940.0 6736780.0 6204370.0 5939790.0 6560900.0 7503300.0 6559740.0 True False 6914785.637867592 6166235.020394358 6980100.496210957 6534036.183574073 7266926.258965138 6165646.225435805 6540241.93996404 6538141.769225575 6140889.862800504 6501625.807000487 1.063547156223947 0.9484143202697078 1.0735930832400846 1.0049849649204186 1.1177090891851436 0.948323759081471 1.0059394579309646 1.0056164355361348 0.9445160403092456 1.0 22.63236909522025 -6.309298464314431 24.999950495254097 0.9827964459544792 1.0362079516066678 0.29683977627017977 0.04634241902729623 579.7048354878972 302815.8817150468 0.015742366056399705 0.013883482154592145 4.905706207793563e-07 6.309298464314431 0.05341150565218855 LKNDMAVPT(ph)PPPPPVPPTK ddPTM_KYSE-520_SHP099_60min_R1 1 LKNDMAVPTPPPPPVPPTK 19 1 G3V1P5;Q96RN5-3;Q96RN5-2;Q96RN5 G3V1P5 MED15 Mediator of RNA polymerase II transcription subunit 15 1 LKNDMAVPT(1)PPPPPVPPTK 74.793 0.021379 1257000000.0 1182200.0 1147900.0 1010800.0 736720.0 889950.0 1048000.0 831700.0 1034500.0 1443600.0 1042500.0 True False 1116621.009342726 1092753.1609669728 1075957.7853371825 806737.6472970548 959984.0018771611 1041459.0432641396 915776.352609788 1030911.5609541157 1181478.6301945543 1033264.2610527272 1.0806732134575834 1.0575737516108765 1.0413190757618556 0.7807660418595347 0.9290788794911908 1.0079309645366648 0.8862944235357194 0.9977230412516015 1.14344284877406 1.0 19.978777845166377 -9.840880338112036 14.559196916322046 0.9999999980753412 0.9845615558610096 0.0 0.09900486599983428 0.0 0.0 0.1008755923973112 0.024465924852992236 1.442512754735671e-10 9.840880338112036 -0.01543844221433166 LKNDSDLFGLGLEEAGPKES(ph)S(ph)EEGKEGK ddPTM_KYSE-520_SHP099_60min_R1 3 LKNDSDLFGLGLEEAGPKESSEEGKEGK 28 3 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 2 LKNDSDLFGLGLEEAGPKES(1)S(1)EEGKEGK;LKNDSDLFGLGLEEAGPKES(1)S(1)EEGKEGK;LKNDSDLFGLGLEEAGPKES(1)S(1)EEGKEGK 92.91 0.0097946 4970380000.0 1254970.0 1167480.0 1046300.0 1058820.0 1151140.0 1152930.0 928940.0 1033730.0 1330040.0 1118900.0 True False 1185354.3123793271 1111392.5083767923 1113746.172139191 1159449.9344541593 1241728.1689093472 1145734.136212331 1022846.3207807337 1030144.2319043957 1088538.2635799162 1108987.4164910289 1.0688618236354137 1.0021687278412712 1.004291081735823 1.045503237649711 1.1196954541092325 1.0331353802350376 0.922324550820553 0.9289052486852353 0.981560518535173 1.0 20.080811564878815 -6.682984703314938 6.548265760288285 0.9525436461205872 1.045910599451003 0.5620735613589831 0.03775829729998294 0.16215967919609967 10.847392585211473 0.015503843086990753 0.011899275474656405 2.0749866011778118e-07 6.682984703314938 0.09336695333041578 LKNDSDLFGLGLEEAGPKES(ph)SEEGK ddPTM_KYSE-520_SHP099_60min_R1 3 LKNDSDLFGLGLEEAGPKESSEEGK 25 2 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 1 LKNDSDLFGLGLEEAGPKES(0.953)S(0.047)EEGK;LKNDSDLFGLGLEEAGPKES(0.954)S(0.046)EEGK;LKNDSDLFGLGLEEAGPKES(0.884)S(0.116)EEGK 258.02 7.8493e-38 766830000.0 833830.0 711610.0 684980.0 784500.0 708330.0 702780.0 731060.0 792020.0 815300.0 674600.0 True False 787575.7877011055 677423.1874516135 729134.9068067505 859058.6441314736 764071.5411536031 698393.6893369958 804962.6792580384 789272.6674788583 667262.0720404685 668623.5688308581 1.1779061110248399 1.0131607963448586 1.0905013535219843 1.2848165756908727 1.1427529282128708 1.0445244856656686 1.2039101174156637 1.1804439811461698 0.9979637319803573 1.0 19.350834684965115 -7.771639469045803 24.634877038594002 0.9989816935658594 1.139790509513992 0.37015661278669465 0.07469964296958856 219.44715743866874 529978.4609761172 0.07181356399127671 0.019427769537011714 1.6918448392418258e-08 7.771639469045803 0.14080881594813255 LKNDSDLFGLGLEEAGPKES(ph)SEEGKEGK ddPTM_KYSE-520_SHP099_60min_R1 1 LKNDSDLFGLGLEEAGPKESSEEGKEGK 28 3 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 1 LKNDSDLFGLGLEEAGPKES(0.868)S(0.132)EEGKEGK 173.08 3.2823000000000006e-10 306260000.0 217270.0 168850.0 184890.0 147800.0 138640.0 118050.0 140710.0 146880.0 181610.0 135310.0 True False 205217.59998299298 160738.19255098302 196808.30523445952 161846.8675623097 149550.17924630543 117313.20616157597 154934.33999726252 146370.50756204978 148634.20201553951 134111.25866958706 1.5302041157379056 1.1985436133068987 1.467500247084703 1.2068104435665277 1.1151202421770985 0.874745396660568 1.1552672127175971 1.0914110344953671 1.1082902620557231 1.0 17.033070831328466 -5.571490942130906 2.6243133680368196 1.0557074287872952 1.378729793310893 0.6634289554961292 0.10845533442716083 0.17165959302847786 2.393392198540166 0.032902377974437735 0.046909334354316705 2.6823105506735975e-06 5.571490942130906 0.3230223645235979 LKNGELENIKPK ddPTM_KYSE-520_SHP099_60min_R1 1 LKNGELENIKPK 12 2 P68402-3;P68402-2;P68402-4;P68402 P68402-3 PAFAH1B2 Platelet-activating factor acetylhydrolase IB subunit beta 0 111.79 0.00011611 567100000.0 506650.0 450340.0 379020.0 304580.0 579130.0 523900.0 311090.0 426250.0 448810.0 400230.0 False True 478545.11451826524 428704.990425879 403452.2356534422 333527.19162468374 624704.2362010455 520630.1457691628 342538.01314582035 424771.43823749735 367317.4175793978 396684.27357422817 1.2063627080712065 1.0807209132924174 1.0170613319712247 0.8407875326629848 1.5748147275219617 1.3124547163872926 0.8635028811691072 1.0708048353170054 0.9259691952740465 1.0 18.597631677853446 -6.7689102733471875 24.998884224375036 0.9709696474610662 1.1640904714556521 0.22616538066358782 0.18707491268083157 319.13554171478734 1067870.2472777285 0.08333504846011115 0.05743335938328466 1.7025102162110028e-07 6.7689102733471875 0.19312082399458597 LKNGFPHPEPDCNPSEAAS(ph)EES(ph)NS(ph)EIEQEIPVEQK ddPTM_KYSE-520_SHP099_60min_R1 6 LKNGFPHPEPDCNPSEAASEESNSEIEQEIPVEQK 35 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 3 LKNGFPHPEPDCNPS(0.001)EAAS(0.999)EES(1)NS(1)EIEQEIPVEQK;LKNGFPHPEPDCNPS(0.023)EAAS(0.981)EES(0.997)NS(0.998)EIEQEIPVEQK;LKNGFPHPEPDCNPS(0.005)EAAS(0.995)EES(1)NS(1)EIEQEIPVEQK;LKNGFPHPEPDCNPS(0.002)EAAS(0.998)EES(1)NS(1)EIEQEIPVEQK;LKNGFPHPEPDCNPS(0.079)EAAS(0.923)EES(0.999)NS(0.999)EIEQEIPVEQK;LKNGFPHPEPDCNPS(0.034)EAAS(0.976)EES(0.996)NS(0.994)EIEQEIPVEQK 207.16 9.562e-17 9938080000.0 4111070.0 4164580.0 3866170.0 3748870.0 3271470.0 3738280.0 3096870.0 3465040.0 4692040.0 3647860.0 True False 3883020.7518851375 3964507.3256379766 4115389.504290711 4105161.4776611365 3528916.076881932 3714948.00787544 3409931.8421385987 3453020.584986418 3840083.812703006 3615542.7983921366 1.0739800269027242 1.096517880358387 1.13824942305229 1.1354205181824255 0.9760404657500589 1.0274938550105146 0.9431313725991641 0.9550490140849685 1.062104371827855 1.0 21.78578082335066 -5.763927415144635 24.999296803866677 0.9908565622822487 1.11194792707847 0.7131863063123577 0.036337203874953664 35.13209526413277 353000.9288719275 0.011335163306064535 0.013457538402880793 1.7221563797625457e-06 5.763927415144635 0.12109136479622129 LKNGFPHPEPDCNPSEAAS(ph)EES(ph)NSEIEQEIPVEQK ddPTM_KYSE-520_SHP099_60min_R1 2 LKNGFPHPEPDCNPSEAASEESNSEIEQEIPVEQK 35 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 2 LKNGFPHPEPDCNPS(0.14)EAAS(0.851)EES(0.833)NS(0.176)EIEQEIPVEQK;LKNGFPHPEPDCNPS(0.003)EAAS(0.992)EES(0.88)NS(0.125)EIEQEIPVEQK 202.23 9.270899999999998e-16 2723900000.0 1657380.0 1726720.0 1563550.0 1333890.0 1288060.0 1333500.0 1309360.0 1281030.0 1771210.0 1582190.0 True False 1565441.8274948807 1643765.7793404378 1664338.934768451 1460662.5045513494 1389422.993941116 1325177.1318632897 1441722.8869221483 1276586.4059246508 1449602.9125705843 1568173.0275251935 0.9982583554350357 1.0482043438373256 1.061323530984984 0.9314421807499703 0.8860138323727125 0.8450452268998742 0.9193646757191061 0.8140596627524521 0.9243896477790272 1.0 20.580653320218964 -5.417339553609974 3.628470789716923 0.8882139885614038 1.036746110353882 0.6023629109830289 0.04960312063205231 0.14368135351576639 3.4443458983959356 0.013737312399886535 0.02090440684481131 3.8252554835577365e-06 5.417339553609974 0.1485321217924782 LKNWEIR ddPTM_KYSE-520_SHP099_60min_R1 2 LKNWEIR 7 1 P49756 P49756 RBM25 RNA-binding protein 25 0 ; 122.74 0.0026365 767310000.0 2768300.0 2304800.0 1704700.0 1539410.0 2657900.0 2235200.0 1773990.0 1629700.0 1856150.0 1834000.0 False True 2614736.8805307625 2194073.948424667 1814587.689616437 1685715.0635595054 2867061.608617681 2221249.2876946577 1953322.2216739652 1624046.9510748407 1519119.9497337372 1817752.1868304084 1.4384451849237196 1.207025888523587 0.9982591151660286 0.9273624181406518 1.5772565861229635 1.221975857758599 1.074581142482325 0.8934369397770722 0.8357134491377548 1.0 20.793724100429404 -7.0404205291278465 2.9443380792065255 0.8993465561822498 1.2178574028358402 0.3846035229109923 0.1804181482150205 0.30986707843202055 5.340638171172915 0.10014705221979192 0.055761739392754306 9.11128162938616e-08 7.0404205291278465 0.3185108466535904 LKPEGLHQLLAGFEDK ddPTM_KYSE-520_SHP099_60min_R1 3 LKPEGLHQLLAGFEDK 16 1 Q9BY32-3;Q9BY32-2;Q9BY32 Q9BY32-3 ITPA Inosine triphosphate pyrophosphatase 0 ;; 156.49 1.9816e-06 6136910000.0 1941310.0 1876260.0 1344040.0 1127160.0 1926610.0 1803770.0 1158210.0 1402650.0 1352400.0 982480.0 False True 1833621.6643944602 1786121.6532763243 1430678.9689400345 1234284.94750699 2078223.2460886093 1792512.0023554917 1275293.169840306 1397784.5345309712 1106838.2512296443 973775.9915578725 1.8830015119401167 1.8342223147428802 1.4692074782529774 1.2675245212529305 2.134190269739361 1.8407847573729803 1.3096371043201203 1.4354271892601898 1.1366456565219845 1.0 19.893230405843422 -7.420823032450144 1.1759071298685206 1.0318553321783435 1.715944083655079 0.5257343075243537 0.2429455394526788 0.4295738314771907 1.049611704242439 0.2342428768897576 0.08426454927347231 3.794695808173015e-08 7.420823032450144 0.6840887514767355 LKPEYDIMCK ddPTM_KYSE-520_SHP099_60min_R1 2 LKPEYDIMCK 10 1 J3KQ32;Q9NTK5;Q9NTK5-2;Q9NTK5-3;C9JCJ9 J3KQ32 OLA1 Obg-like ATPase 1 0 ; 97.214 0.00282 1798430000.0 2632300.0 2188240.0 1619840.0 1412800.0 2761300.0 2577900.0 1908510.0 2101500.0 2078380.0 2087830.0 False True 2486281.071640045 2083113.6657847974 1724257.478235639 1547072.0872261894 2978598.6003521574 2561810.369876548 2101440.816062649 2094210.3869937886 1700998.5836961486 2069333.450507162 1.2014888518961 1.0066592531398253 0.8332429352132928 0.747618556519746 1.4394000153151483 1.2379881885390138 1.015515800775181 1.0120217147606296 0.8220031350091306 1.0 20.98073470781915 -7.552960338489361 4.617989345551752 0.909273485530177 1.0631816966561016 0.0954953808353809 0.1911462406664374 0.5418456814853201 27.899409037185347 0.14675512874133412 0.05406256296918626 2.7992369454854627e-08 7.552960338489361 0.15390821112592468 LKPFFEGMSQSSS(ph)QTEIGSLNSK ddPTM_KYSE-520_SHP099_60min_R1 1 LKPFFEGMSQSSSQTEIGSLNSK 23 1 Q6VY07-2;Q6VY07 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 LKPFFEGMSQS(0.004)S(0.016)S(0.975)QT(0.005)EIGSLNSK 106.43 2.0102000000000003e-06 0.0 172150.0 149660.0 115030.0 127550.0 151630.0 150550.0 141510.0 116880.0 132890.0 104290.0 True False 162600.49632748318 142470.10895576017 122445.01785450737 139672.3136506941 163562.4183433159 149610.361606313 155815.21180451015 116474.57055999713 108760.52588428544 103366.07173639213 1.5730548099201527 1.3783063104022426 1.1845764843107423 1.3512394473777765 1.5823607843049183 1.447383644295342 1.507411563456486 1.1268162618875057 1.0521878606517083 1.0 16.65740319616319 -7.388255221434723 4.22585345988975 1.043256662175828 1.423186539183466 0.7058839662901627 0.1109285080063373 0.14593918852660656 4.27277259161209 0.07303891960962942 0.03248126374370022 4.090202205545613e-08 7.388255221434723 0.37992987700763803 LKPGDLVGVNK ddPTM_KYSE-520_SHP099_60min_R1 1 LKPGDLVGVNK 11 1 E9PM69;P17980;R4GNH3;E9PKD5;E9PMD8;E9PLG2 E9PM69 PSMC3 26S protease regulatory subunit 6A 0 86.814 0.016409 0.0 601720.0 545290.0 413760.0 415580.0 592980.0 606230.0 431500.0 528230.0 522360.0 500020.0 False True 568341.3921009188 519093.4499030235 440431.6316394066 455076.5982513174 639644.1524053244 602446.293700399 475120.23103417485 526397.6934198084 427512.59162401437 495590.2118096734 1.1467970483629826 1.047424742323959 0.8887012316711173 0.9182517882860954 1.290671480515385 1.2156137860361185 0.958695752483183 1.0621632164558696 0.8626332430233639 1.0 18.918788168143948 -7.445685593278806 2.082297786248261 0.9421177531510527 1.0701902570831008 0.13704991892284057 0.1256673529038638 0.7771939452763176 6.160686602498517 0.1113706972947616 0.038766915487163746 3.583557742462226e-08 7.445685593278806 0.12807250393204805 LKPGGVGAPSSS(ph)SPSPS(ph)PSAR ddPTM_KYSE-520_SHP099_60min_R1 1 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 2 LKPGGVGAPS(0.013)S(0.076)S(0.482)S(0.423)PS(0.017)PS(0.867)PS(0.122)AR 75.896 0.0069756 584560000.0 387040.0 384280.0 371650.0 525280.0 427230.0 380230.0 456100.0 467910.0 431050.0 403820.0 True False 365570.1196548881 365818.6119839604 395607.15366102464 575202.4532688092 460850.57039381855 377856.84353084274 502207.0391070383 466286.92942101543 352782.1858862311 400242.46896720637 0.9133716384425984 0.913992492920419 0.9884187319797851 1.4371349815852204 1.1514284618096788 0.944069839729582 1.2547569986836813 1.1650111259413112 0.8814211715127513 1.0 18.61051473142973 -5.013916819335758 24.646272024395277 1.132395686871317 0.923062864636632 0.2388790293942673 0.1501412612280437 714.5638784351983 1265478.771558703 0.040753368006445134 0.07460726734392625 9.684633288201458e-06 5.013916819335758 -0.20933282223468497 LKPGGVGAPSSSS(ph)PS(ph)PSPSAR ddPTM_KYSE-520_SHP099_60min_R1 2 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 2 LKPGGVGAPS(0.007)S(0.028)S(0.17)S(0.794)PS(0.65)PS(0.339)PS(0.013)AR;LKPGGVGAPS(0.01)S(0.052)S(0.421)S(0.517)PS(0.692)PS(0.307)PS(0.001)AR 124.19 4.2692e-05 1544550000.0 1186630.0 1037910.0 967390.0 1092860.0 1171130.0 1171840.0 1203110.0 1307680.0 1313810.0 1335960.0 True False 1120805.2684117395 988047.245665328 1029749.5072787264 1196725.0858196598 1263291.2681818071 1164526.1118880222 1324732.100022078 1303143.9632948076 1075255.222454909 1324124.4337611536 0.84645010682879 0.7461891197482068 0.7776833362660184 0.903785970039373 0.9540578181111341 0.879468788730229 1.0004589193020164 0.9841552123566277 0.8120499818892883 1.0 20.336607274199466 -5.350454420635122 3.8049592580946414 0.9370734594876842 0.7851787608343629 0.5564610916707663 0.059133620068073545 0.16792264113966143 4.51383671606578 0.016741942215758445 0.02610129327891931 4.46216452703685e-06 5.350454420635122 -0.15189469865332128 LKPGGVGAPSSSS(ph)PSPS(ph)PSAR ddPTM_KYSE-520_SHP099_60min_R1 2 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 2 LKPGGVGAPSS(0.002)S(0.041)S(0.956)PS(0.002)PS(0.993)PS(0.006)AR;LKPGGVGAPSS(0.002)S(0.18)S(0.814)PS(0.04)PS(0.958)PS(0.006)AR 156.51 1.336e-07 2203200000.0 2047210.0 1833200.0 1608170.0 1816620.0 1851130.0 1891980.0 1992770.0 2098700.0 2048030.0 1930780.0 True False 1933647.180288044 1745130.3203107014 1711835.2113629787 1989271.0186132835 1996803.3995110628 1880171.451025652 2194218.639161003 2091420.09954026 1676159.3786349085 1913674.791324109 1.0104366682648913 0.9119262730650339 0.8945277531604658 1.039503173492121 1.0434392554909684 0.9824926677979201 1.1465995419434771 1.0928816688300342 0.8758851745521197 1.0 20.867914249300924 -5.275352477333898 24.13533525628429 1.0336590732825979 0.936259837323225 0.22550627828723868 0.07271320556401917 653.6832354739882 1133956.6383904633 0.020648109293165094 0.03082017045225652 5.304537484110328e-06 5.275352477333898 -0.09739923595937283 LKPGGVGAPSSSS(ph)PSPS(ph)PSARPGPPPSEEAMDFR ddPTM_KYSE-520_SHP099_60min_R1 2 LKPGGVGAPSSSSPSPSPSARPGPPPSEEAMDFR 34 2 Q92797 Q92797 SYMPK Symplekin 2 LKPGGVGAPS(0.012)S(0.062)S(0.43)S(0.496)PS(0.174)PS(0.804)PS(0.022)ARPGPPPSEEAMDFR;LKPGGVGAPS(0.026)S(0.023)S(0.152)S(0.795)PS(0.225)PS(0.773)PS(0.007)ARPGPPPSEEAMDFR 141.65 8.787200000000002e-07 3191100000.0 1271660.0 1263540.0 1045270.0 1185140.0 1068300.0 1045010.0 1067540.0 959880.0 1295520.0 1033460.0 True False 1201118.4848086396 1202837.6417877947 1112649.776691132 1297775.3492746667 1152369.132204474 1038487.7049632218 1175457.3613863804 956550.4003176773 1060286.2254015298 1024304.348419714 1.172618750141706 1.1742971155433635 1.0862491977191313 1.2669821730981234 1.1250261057490745 1.0138468186388057 1.1475665052089876 0.9338536947474969 1.0351281111295956 1.0 19.966213011925586 -6.575403233761702 1.0331315467360616 0.9971230753141321 1.170562280156275 0.5315445553592081 0.0652167343086609 0.415513184680274 0.9058264570424737 0.04216246265720418 0.02835831425201777 2.6582557761834225e-07 6.575403233761702 0.1734392048421428 LKPGGVGAPSSSSPS(ph)PSPSAR ddPTM_KYSE-520_SHP099_60min_R1 1 LKPGGVGAPSSSSPSPSPSAR 21 1 Q92797 Q92797 SYMPK Symplekin 1 LKPGGVGAPSSS(0.002)S(0.068)PS(0.928)PS(0.001)PSAR 147.17 7.0666e-07 685440000.0 314470.0 315410.0 213700.0 225200.0 216110.0 339090.0 239270.0 244480.0 309690.0 359990.0 True False 297025.722219597 300257.230159938 227475.44393208946 246602.9402911512 233116.6275023014 336973.6135309514 263457.746650167 243631.955942061 253458.1026495921 356800.76866798237 0.832469401140757 0.841526298502287 0.6375419110819367 0.6911502495125655 0.6533523690898376 0.9444307387255633 0.7383889548044251 0.6828235175938493 0.7103631071082281 1.0 18.444759197745174 LKPGYLEATVDWFR ddPTM_KYSE-520_SHP099_60min_R1 1 LKPGYLEATVDWFR 14 1 Q15181 Q15181 PPA1 Inorganic pyrophosphatase 0 73.91 0.016996 16031000.0 64836.0 61190.0 55798.0 56038.0 80286.0 60532.0 55250.0 52693.0 49320.0 32672.0 False True 61239.41783263836 58250.34055193751 59394.8283599566 61363.834671560944 86604.0514351478 60154.19733479468 60835.20918803744 52510.22028163863 40364.73125602343 32382.55149843137 1.8911239231906984 1.798818742085817 1.8341614731264682 1.894966018182151 2.6744048083840135 1.8576114157560617 1.8786416255984133 1.6215590758554728 1.2464963194138274 1.0 14.982929043050065 -7.655977412725446 1.4235059082049337 1.005413311081797 1.997008171467106 0.6788327689493723 0.23786232397983006 0.24888549371977636 0.9484893443454437 0.23618342655942612 0.07502659727138487 2.2081195723920504e-08 7.655977412725446 0.9915948603853089 LKPNLGNGADLPNYR ddPTM_KYSE-520_SHP099_60min_R1 2 LKPNLGNGADLPNYR 15 1 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 0 ; 150.59 5.6527999999999995e-06 1130780000.0 1477910.0 1402130.0 951830.0 908690.0 1561280.0 1372430.0 1036710.0 1395090.0 1189080.0 1113660.0 False True 1395927.3861594566 1334769.5701599629 1013186.4847818455 995051.6243923897 1684143.8535319646 1363864.155292942 1141510.7641145762 1390250.7584064538 973173.0462674843 1103793.83881437 1.2646631436708136 1.2092562245080958 0.9179127923654207 0.9014832203278242 1.5257775449634436 1.2356149376208911 1.034170262574322 1.2595203103323884 0.8816619662534165 1.0 20.074039307115576 -7.767466206817288 24.99898433707779 0.9408309109689678 1.16231367915892 0.21008431249876258 0.17629358362399974 267.0651788089861 1107719.1457770942 0.16278860650067645 0.04635673048518314 1.708180631291158e-08 7.767466206817288 0.22148276818995216 LKQVEDEK ddPTM_KYSE-520_SHP099_60min_R1 2 LKQVEDEK 8 1 P35579 P35579 MYH9 Myosin-9 0 ; 157.96 0.00027881 1573080000.0 2664600.0 2939300.0 1924940.0 1739570.0 2832000.0 2964200.0 2175450.0 2859100.0 2844100.0 2680360.0 False True 2516789.3262515916 2798091.6160207563 2049024.712412899 1904898.20977921 3054862.2881241874 2945699.3282858417 2395365.716345992 2849182.4494189587 2327683.1339265243 2656614.095688524 0.9473673012336051 1.0532548255924106 0.7712918168048212 0.7170398639647023 1.1499081831576474 1.1088171718528785 0.9016611483894037 1.0724863855999853 0.8761841389399277 1.0 21.341157244020817 -5.769249623620974 24.999985937459147 1.0205067628056705 0.8779577124024271 0.27335905094718826 0.11637791673487508 264.1212987924204 845429.8404745654 0.03803655460669333 0.04391855112390142 1.7011804234783944e-06 5.769249623620974 -0.1425490504032434 LKS(ph)DERPVHIK ddPTM_KYSE-520_SHP099_60min_R1 5 LKSDERPVHIK 11 2 H0Y612;Q9UPN9-2;Q9UPN9 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 1 LKS(1)DERPVHIK;LKS(1)DERPVHIK;LKS(1)DERPVHIK;LKS(1)DERPVHIK;LKS(1)DERPVHIK 153.09 2.7888e-05 6523570000.0 2050390.0 1971330.0 2028360.0 2134930.0 2169340.0 2488710.0 2726780.0 3053030.0 3590070.0 2370680.0 True False 1936650.7793488682 1876624.3477733436 2159111.331090746 2337833.1053098906 2340054.7161438274 2473177.0377498968 3002429.533208264 3042439.7515125615 2938203.786299921 2349677.6195611297 0.8242197836955155 0.7986731167503129 0.9188968363643105 0.9949590896416456 0.995904585660096 1.0525601542784555 1.2778048819178245 1.2948328426777225 1.2504710271057167 1.0 21.164031399065482 -5.931446542037471 0.8819796118717766 1.2269528775395315 0.8232443419897519 0.7158780252464032 0.09092493072070335 0.30224335148621656 0.5158857187053131 0.050063773531593664 0.06674268723561308 1.1709907324641302e-06 5.931446542037471 -0.4037085355497796 LKS(ph)EDELRPEVDEHTQK ddPTM_KYSE-520_SHP099_60min_R1 10 LKSEDELRPEVDEHTQK 17 2 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;H0YCR2;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 LKS(1)EDELRPEVDEHTQK;LKS(1)EDELRPEVDEHTQK;LKS(1)EDELRPEVDEHTQK;LKS(1)EDELRPEVDEHTQK;LKS(1)EDELRPEVDEHTQK;LKS(1)EDELRPEVDEHTQK;LKS(1)EDELRPEVDEHTQK;LKS(1)EDELRPEVDEHTQK;LKS(1)EDELRPEVDEHTQK;LKS(0.999)EDELRPEVDEHT(0.001)QK 265.41 8.9339e-30 29185700000.0 7350412.0 6499465.0 6240120.0 8006210.0 9366535.0 13475803.0 15107493.0 16376447.0 18738120.0 14437702.0 True False 6942669.99367696 6187220.945504147 6642368.119745009 8767117.791245196 10103628.016205952 13391695.514881697 16634705.827363107 16319640.927648464 15335749.757565234 14309795.192642182 0.4851690677758089 0.43237662469729093 0.4641833115235908 0.6126654975294878 0.7060637752104963 0.9358411727491003 1.1624698748949496 1.140452445891029 1.0716959642756156 1.0 23.770499688010993 -6.10632571142821 1.303665967361305 1.1117476616018238 0.4621185792043867 0.9599818531205195 0.05552865839139979 0.0765637913352422 0.26719700557325693 0.025642474692420637 0.02642800245540733 7.828423078226001e-07 6.10632571142821 -0.6496290823974371 down LKS(ph)EDGVEGDLGETQSR ddPTM_KYSE-520_SHP099_60min_R1 15 LKSEDGVEGDLGETQSR 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LKS(1)EDGVEGDLGETQSR;LKS(0.999)EDGVEGDLGET(0.001)QSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(0.943)EDGVEGDLGET(0.029)QS(0.029)R;LKS(1)EDGVEGDLGETQSR;LKS(0.999)EDGVEGDLGETQS(0.001)R;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR;LKS(1)EDGVEGDLGETQSR 261.06 1.196e-29 29577930000.0 4455684.0 4512645.0 4383445.0 6128200.0 8071570.0 15679850.0 20818410.0 27838230.0 34428640.0 25122900.0 True False 4208518.326334152 4295850.760581761 4666008.878459974 6710622.285489483 8706756.63804892 15581986.24000497 22922938.050901916 27741665.677621692 28177266.851386428 24900330.651320416 0.169014555881449 0.17252183598429285 0.18738742644819237 0.2694993243045 0.34966429803562543 0.6257742701572795 0.9205876970829042 1.1141083251499155 1.1316021158896636 1.0 24.56966156416967 -6.524773323100812 1.2400953965272232 1.110237004968851 0.18477212366927012 0.987795064821396 0.04308030398436611 0.043699331444640846 0.13718359067748748 0.024606133412607124 0.017546552352924252 2.986941224743624e-07 6.524773323100812 -0.9254648812995809 down LKS(ph)IEER ddPTM_KYSE-520_SHP099_60min_R1 5 LKSIEER 7 1 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 LKS(1)IEER;LKS(1)IEER;LKS(1)IEER;LKS(1)IEER;LKS(1)IEER 112.13 0.0019061 2619650000.0 2601740.0 2762510.0 2735040.0 3331320.0 3378660.0 4051640.0 4673640.0 5505490.0 6281490.0 4537100.0 True False 2457416.2957598963 2629794.872987952 2911345.054618728 3647927.6512021185 3644541.320054255 4026352.211880453 5146097.141530843 5486392.740181029 5140929.759476859 4496904.823810382 0.546468380373157 0.5848010967596233 0.6474108678492878 0.8112085521327765 0.8104555161490187 0.8953607802774858 1.1443642556727227 1.2200375491897157 1.1432151581809047 1.0 22.100500919270655 -6.0227842776516 0.7960874133124243 1.159442127519709 0.561578426649032 0.8916665011843687 0.07587979612269019 0.1968161511533985 0.2766659394201887 0.048642819229093436 0.060576012019294904 9.488896778528746e-07 6.0227842776516 -0.5978637008706771 LKS(ph)IS(ph)REPS(ph)PALGPNLDGSGLLPR ddPTM_KYSE-520_SHP099_60min_R1 8 LKSISREPSPALGPNLDGSGLLPR 24 2 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 3 LKS(1)IS(1)REPS(1)PALGPNLDGSGLLPR;LKS(1)IS(1)REPS(1)PALGPNLDGSGLLPR;LKS(1)IS(1)REPS(1)PALGPNLDGSGLLPR;LKS(1)IS(1)REPS(1)PALGPNLDGSGLLPR;LKS(1)IS(1)REPS(1)PALGPNLDGSGLLPR;LKS(1)IS(1)REPS(1)PALGPNLDGSGLLPR;LKS(1)IS(1)REPS(0.999)PALGPNLDGS(0.001)GLLPR;LKS(1)IS(1)REPS(1)PALGPNLDGSGLLPR 115.05 0.00081415 3016370000.0 2089675.0 1800226.0 1709105.0 1767440.0 1785094.0 1741940.0 1695749.0 1835867.0 2117401.0 1798189.0 True False 1973756.5620861647 1713740.4407656854 1819276.642964685 1935416.966199789 1925570.7420045051 1731067.9063201642 1867171.8578353887 1829498.8058715796 1732934.35373551 1782258.4444298742 1.1074468847404164 0.9615555174512824 1.0207703875105794 1.0859350798693557 1.0804105027654813 0.971277713246529 1.047643715012767 1.0265058985072264 0.9723249504871094 1.0 20.765275125859738 -7.652246457367502 5.406801060003086 0.9868012149902804 1.0363551613207482 0.1768148546669429 0.04478747214967945 0.3745727100685595 15.893535812454715 0.03225961851006778 0.011472964787371557 2.2271708954601614e-08 7.652246457367502 0.049553946330467835 LKS(ph)KGS(ph)DKDFVIVR ddPTM_KYSE-520_SHP099_60min_R1 3 LKSKGSDKDFVIVR 14 3 A0A0A0MTL5;Q13309-2;Q13309;D6RF40;D6RAG5;D6R9R7;H0Y9I9 A0A0A0MTL5 SKP2 S-phase kinase-associated protein 2 2 LKS(1)KGS(1)DKDFVIVR;LKS(1)KGS(1)DKDFVIVR;LKS(1)KGS(1)DKDFVIVR 73.809 0.027273000000000002 3019570000.0 3677870.0 3561380.0 3644370.0 3600760.0 3907060.0 4287750.0 3951630.0 4149770.0 5248910.0 4004130.0 True False 3473851.2194479248 3390285.9590596333 3879291.9213981647 3942975.147792033 4214523.393869516 4260988.561789891 4351099.324592297 4135375.4164335965 4295840.258253328 3968656.5233659963 0.8753217112630335 0.8542654016791 0.9774824045765398 0.9935289498038541 1.0619521666982128 1.0736602013055931 1.0963658101865499 1.042008899506929 1.0824419379608674 1.0 21.920219275658038 -5.068270733028328 1.2692914934401482 1.0643427806969996 0.8498701882494505 0.8562071827403952 0.030364122857815392 0.16814395580220534 0.4913131405174867 0.009614370562075331 0.0323143242128801 8.545338425168886e-06 5.068270733028328 -0.21447259244754913 LKS(ph)PQAVLQLGVNNEDSK ddPTM_KYSE-520_SHP099_60min_R1 1 LKSPQAVLQLGVNNEDSK 18 1 D6RJ90;Q9Y6G5 D6RJ90 COMMD10 COMM domain-containing protein 10 1 LKS(1)PQAVLQLGVNNEDSK 162.77 1.7604e-08 954710000.0 665690.0 714190.0 659930.0 523860.0 567780.0 734340.0 564180.0 766640.0 889340.0 718790.0 True False 628762.8486798842 679879.2403789546 702470.1437253332 573647.4968957475 612461.055773711 729756.7116704076 621212.8202661895 763980.704775121 727858.2744369813 712422.0798101581 0.88257069299064 0.9543208438460029 0.9860308427168949 0.8052073527095196 0.85968848121175 1.024331968858782 0.8719730029026143 1.0723708970091184 1.0216672041255888 1.0 19.44237270443472 -7.263057494382291 24.996574291035877 1.0352642911767622 0.9146903471754181 0.4309696744148326 0.06273345168755527 143.2245401743931 2212477.2534842147 0.032992111299683886 0.017150565692038853 5.456856153329132e-08 7.263057494382291 -0.12057394400134414 LKS(ph)PSMAVPSPGWVASPK ddPTM_KYSE-520_SHP099_60min_R1 4 LKSPSMAVPSPGWVASPK 18 1 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 LKS(0.958)PS(0.042)MAVPSPGWVASPK;LKS(0.961)PS(0.039)MAVPSPGWVASPK;LKS(0.97)PS(0.03)MAVPSPGWVASPK;LKS(0.961)PS(0.039)MAVPSPGWVASPK 213.23 2.3066e-18 5344400000.0 6679350.0 6862940.0 5189980.0 4859080.0 5355060.0 6592130.0 5387410.0 6417310.0 8280280.0 6559420.0 True False 6308833.140545886 6533234.060917049 5524534.415061603 5320885.5022643255 5776472.755876524 6550986.071443537 5932021.978854747 6395049.849421415 6776789.880872383 6501308.641951535 0.970394344891789 1.0049106142661042 0.8497572903112122 0.8184329948481149 0.8885092331414938 1.007641143072557 0.9124350658537721 0.9836557840302405 1.0423731980886475 1.0 22.63229871534636 -7.18986030402284 1.1620601385103657 1.021111314932412 0.9119579859059683 0.3140643670723876 0.05939034399194231 0.6793219813686076 1.6375780204287145 0.05547213049391391 0.022497636794548564 6.458619447896126e-08 7.18986030402284 -0.1091533290264437 LKS(ph)PSQDNTDSYFR ddPTM_KYSE-520_SHP099_60min_R1 6 LKSPSQDNTDSYFR 14 1 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LKS(0.675)PS(0.325)QDNTDSYFR;LKS(0.994)PS(0.006)QDNTDSYFR;LKS(0.962)PS(0.038)QDNTDSYFR;LKS(0.789)PS(0.211)QDNTDSYFR;LKS(0.975)PS(0.025)QDNTDSYFR;LKS(0.988)PS(0.012)QDNTDSYFR 267.6 5.280199999999999e-25 9107000000.0 2404810.0 2325690.0 2225650.0 2242030.0 2164950.0 2619010.0 2724120.0 3264810.0 3875710.0 3100610.0 True False 2271410.3954301164 2213960.361468142 2369118.9601659076 2455111.8571090996 2335319.2481195107 2602663.7871175664 2999500.634449165 3253485.136122384 3171978.762698351 3073141.0076380777 0.7391168806718221 0.72042264118877 0.7709112449697647 0.79889333128779 0.7599128195924748 0.8469067252849208 0.9760374245744388 1.0586839744860628 1.0321618027987063 1.0 21.551282534222185 -6.689658348595436 1.863269567805153 1.0363029737539693 0.7568020692958611 0.9630856279432171 0.02407948911070962 0.061668317705971684 0.43822298666991033 0.012917190646219531 0.008601818311050502 2.0433447739463852e-07 6.689658348595436 -0.27950090445810816 LKS(ph)PVLSNTTTEPASTMS(ph)PPPAK ddPTM_KYSE-520_SHP099_60min_R1 2 LKSPVLSNTTTEPASTMSPPPAK 23 1 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 2 LKS(0.794)PVLS(0.058)NT(0.029)T(0.049)T(0.07)EPAS(0.067)T(0.075)MS(0.857)PPPAK;LKS(0.731)PVLS(0.118)NT(0.068)T(0.078)T(0.005)EPAS(0.207)T(0.107)MS(0.686)PPPAK 120.31 9.880200000000001e-05 1868010000.0 954910.0 783820.0 771700.0 823900.0 936530.0 968830.0 854480.0 897970.0 1014880.0 881920.0 True False 901939.2387341097 746164.1106621943 821445.016763656 902203.2082854317 1010229.5828732151 962783.1726007578 940859.1773211623 894855.1516577742 830603.3750428433 874106.8749233772 1.031840916264584 0.8536302963268673 0.9397535248028597 1.0321429039950263 1.1557277626511864 1.1014478895216948 1.0763662937711553 1.0237365445000255 0.9502309144012312 1.0 19.737450159763917 -5.303208734324415 4.35997439110832 1.058700360936998 0.931938954573301 0.3461381190105365 0.0665808309775585 0.2133573079267545 9.218958197570766 0.019696498494720684 0.031070219543115857 4.9749791580895905e-06 5.303208734324415 -0.12676140636369704 LKS(ph)VEDEMDS(ph)PGEEPFYTGQGR ddPTM_KYSE-520_SHP099_60min_R1 4 LKSVEDEMDSPGEEPFYTGQGR 22 1 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;A0A590UK73;B1AKN7;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 2 LKS(1)VEDEMDS(1)PGEEPFYTGQGR;LKS(1)VEDEMDS(1)PGEEPFYTGQGR;LKS(1)VEDEMDS(1)PGEEPFYTGQGR;LKS(1)VEDEMDS(1)PGEEPFYTGQGR 165.1 1.1135000000000001e-09 970377000.0 719008.0 808475.0 763940.0 978166.0 857260.0 1261345.0 1350810.0 1712690.0 1937920.0 1438630.0 True False 679123.1929330874 769634.6474542847 813184.7947472174 1071130.6025436688 924721.4848578166 1253472.477982828 1487363.0574351663 1706749.0781348497 1586042.5789876897 1425884.8574372046 0.4762819307540025 0.539759324492426 0.5703018658945467 0.7512041361241828 0.6485246547325375 0.879083939663782 1.043115823607566 1.1969753863593535 1.1123216371329887 1.0 20.443426055796568 -6.332768179118432 0.9941826836648884 1.1347533363593083 0.5423148245555026 0.906115968423543 0.07545069401126024 0.14864024714549523 0.30885683033277067 0.04603177179518241 0.03906557393157171 4.6476329376886e-07 6.332768179118432 -0.5924385118038057 LKS(ph)VEDEMDSPGEEPFYTGQGR ddPTM_KYSE-520_SHP099_60min_R1 1 LKSVEDEMDSPGEEPFYTGQGR 22 1 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;A0A590UK73;B1AKN7;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 LKS(1)VEDEMDSPGEEPFYTGQGR 168.17 9.219299999999999e-10 392160000.0 167620.0 206430.0 168650.0 150830.0 199830.0 281880.0 276590.0 364360.0 386560.0 265530.0 True False 158321.7844578141 196512.792942253 179521.44884954081 165164.8378513071 215555.4841228302 280120.6823619233 304550.4164582672 363096.12020226335 316370.4483845991 263177.61077921407 0.6015777101595241 0.7466926702481247 0.6821303997631684 0.62757936498583 0.8190494756929183 1.0643788486890822 1.1572048836394435 1.3796618911738403 1.2021176400526328 1.0 18.005677234818034 -6.288775766558107 1.793102162508037 1.218635165496386 0.6694762306514499 0.8609213423419362 0.09562323318643734 0.11677566515692739 0.7406483060062936 0.03949556108531678 0.03537575475696957 5.143091293723125e-07 6.288775766558107 -0.5491589348449362 LKSHQKLS(ph)ET(ph)LKNLLS(ph)CVY(ph)S(ph)CPSYIAK ddPTM_KYSE-520_SHP099_60min_R1 1 LKSHQKLSETLKNLLSCVYSCPSYIAK 27 3 Q5T3Q7;Q9H583 Q5T3Q7 HEATR1 HEAT repeat-containing protein 1;HEAT repeat-containing protein 1, N-terminally processed 5 LKS(0.165)HQKLS(0.878)ET(0.903)LKNLLS(0.905)CVY(0.902)S(0.899)CPS(0.169)Y(0.179)IAK 54.841 0.028505000000000003 381070000.0 113060.0 183610.0 131840.0 243850.0 118710.0 128990.0 160890.0 181120.0 183900.0 137460.0 True False 106788.33642047775 174789.0999957714 140338.61735145855 267025.4306838243 128051.8016324935 128184.92556358904 177154.33133508312 180491.73699372594 150508.39574174176 136242.21134226167 0.783812412969493 1.282929117736308 1.0300670839737478 1.9599317131825964 0.9398834646834043 0.940860576914511 1.300289606207608 1.3247857269455394 1.1047119263474168 1.0 17.055814231085456 LKSIS(ph)REPS(ph)PALGPNLDGSGLLPR ddPTM_KYSE-520_SHP099_60min_R1 1 LKSISREPSPALGPNLDGSGLLPR 24 2 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 2 LKS(0.392)IS(0.716)REPS(0.892)PALGPNLDGSGLLPR 90.51799999999999 0.0023343000000000005 86710000.0 49951.0 45111.0 35545.0 40181.0 43141.0 49872.0 43003.0 55070.0 57118.0 51713.0 True False 47180.11845515019 42943.79984700853 37836.287574010836 43999.790159141834 46535.95126128724 49560.73034892091 47350.16290883575 54878.97502343463 46746.81102760638 51254.863052105226 0.9205003319819098 0.8378482994550636 0.7381989790031595 0.8584510335031439 0.9079324085595394 0.9669468885037878 0.92381795773603 1.0707076705608434 0.9120463550957887 1.0 15.64540127330532 -6.004404194365586 1.8350560818497312 0.9792997957023896 0.8293717260276574 0.5527681744767889 0.057809688715406087 0.25875094889963085 1.758825930237315 0.022015402263118954 0.024170026027714613 9.89910214596718e-07 6.004404194365586 -0.14992806967473216 LKSPVLSNTTTEPAS(ph)TMSPPPAKK ddPTM_KYSE-520_SHP099_60min_R1 1 LKSPVLSNTTTEPASTMSPPPAKK 24 2 A0A075B784;Q9P275 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LKSPVLSNTTT(0.004)EPAS(0.771)T(0.135)MS(0.09)PPPAKK 136.49 9.7831e-07 844120000.0 403460.0 418920.0 397510.0 269090.0 364730.0 345670.0 356390.0 393410.0 411010.0 368340.0 True False 381079.26952242973 398794.45438826055 423134.130638488 294664.2326951413 393432.1759701743 343512.5453102236 392417.37923121545 392045.3525325844 336380.9447189416 365076.7941641841 1.0438331759620112 1.0923577196991403 1.1590277371839584 0.8071294516808524 1.077669636249841 0.9409322937018492 1.0748899560423324 1.0738709192134297 0.9213977719100457 1.0 18.47784044228312 LKT(ph)PTKPPCQ ddPTM_KYSE-520_SHP099_60min_R1 1 LKTPTKPPCQ 10 2 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR70 Q96L91-4 EP400 E1A-binding protein p400 1 LKT(0.926)PT(0.074)KPPCQ 91.93700000000001 0.067797 448070000.0 484120.0 503480.0 355590.0 314300.0 398150.0 481100.0 433290.0 392540.0 578760.0 557310.0 True False 457264.8985307065 479292.06506111287 378511.90036411607 344170.9775022596 429482.13983638556 478097.2764450163 477091.1817028912 391178.3703595251 473671.7733523136 552372.6669806195 0.827819560714705 0.8676969258472184 0.6852473393246239 0.6230774947347913 0.7775224327880335 0.8655339140120609 0.8637125082795423 0.7081783617168912 0.8575221072061714 1.0 19.075282407017692 -6.091280578600003 5.769955023842081 0.8400984792184049 0.748426134457251 0.22794828073430462 0.09208953112908555 0.433435733649116 21.882359195650476 0.03212856732157248 0.032344805026002385 8.104373007205721e-07 6.091280578600003 -0.09167234476115382 LKTEEGEIDYS(ph)AEEGENRR ddPTM_KYSE-520_SHP099_60min_R1 2 LKTEEGEIDYSAEEGENRR 19 2 B7WPG3;C9IYN3;V9GYK2;Q8WVV9-3;Q8WVV9-2;Q8WVV9-5;Q8WVV9-4;Q8WVV9 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 LKTEEGEIDY(0.001)S(0.999)AEEGENRR;LKTEEGEIDY(0.001)S(0.999)AEEGENRR 103.58 8.409e-05 549910000.0 236900.0 381860.0 232543.0 202863.0 276123.0 210947.0 222666.0 288610.0 491170.0 200873.0 True False 223758.68475155812 363514.87241645483 247533.09386195548 222143.03852701496 297852.30917504063 209630.40152618318 245175.25229074262 287608.8792720804 401985.9093880986 199093.42149682928 1.1238878867482904 1.8258507472696384 1.2433012201053446 1.1157728711320216 1.496042947756484 1.052924802588325 1.2314583296999957 1.4445925792513479 2.019081827846836 1.0 17.603086026330498 -7.5234334071606686 24.999928819087955 1.5836396114466877 1.3099164058891253 0.06333628036517691 0.31305154734680385 43.391247103114345 1955157.4306494733 0.19741147718270063 0.0760999781118863 2.9961709771186756e-08 7.5234334071606686 -0.27372320555756247 LKTEKEPDATPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 LKTEKEPDATPPSPR 15 2 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 LKTEKEPDATPPS(1)PR;LKTEKEPDAT(0.003)PPS(0.997)PR;LKTEKEPDATPPS(1)PR;LKTEKEPDATPPS(1)PR;LKTEKEPDATPPS(1)PR;LKTEKEPDAT(0.001)PPS(0.999)PR 166.06 3.1631999999999995e-08 8929130000.0 11697190.0 11115120.0 11463760.0 9568940.0 9748830.0 10401630.0 9357850.0 9535760.0 13762100.0 9831070.0 True False 11048323.552929834 10581132.951064741 12202732.31226452 10478369.18059328 10516007.45774494 10336709.568881253 10303832.801814945 9502682.674223118 11263249.554308996 9743974.368256716 1.1338621321626565 1.085915515699145 1.2523362491611005 1.0753691239920569 1.0792318473253892 1.0608309482581881 1.0574568869333338 0.9752368299715912 1.155919456336182 1.0 23.216078907531724 -5.497772795667244 23.989910180046742 1.0560978692382872 1.1524969060409989 0.3767902266920037 0.05912485816941391 478.9907637452328 457697.83512694837 0.016050310614817435 0.023669331488469728 3.178536510362549e-06 5.497772795667244 0.09639903680271167 LKTNILQYASTRPPT(ph)LSPIPHIPR ddPTM_KYSE-520_SHP099_60min_R1 1 LKTNILQYASTRPPTLSPIPHIPR 24 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 LKTNILQY(0.042)AS(0.012)T(0.012)RPPT(0.876)LS(0.058)PIPHIPR 59.983000000000004 0.035566 114690000.0 164760.0 240200.0 216660.0 141810.0 153360.0 173420.0 106980.0 118670.0 179330.0 83671.0 True False 155620.43435908284 228660.4314524497 230626.25026825702 155287.57976326876 165428.55950096223 172337.62145311746 117794.58242418547 118258.36146778631 146768.19254141688 82929.74003505296 1.8765334883879388 2.757279009385522 2.7809836395336016 1.8725197944384173 1.9948037872907651 2.07811602183093 1.420414225034297 1.4260066583809445 1.7697896132241644 1.0 16.339601949386118 -6.578351921039864 0.4803024499486835 1.1483447541831788 2.5436899021522033 0.6195402793214151 0.32840068406748346 0.6869355146800429 0.3429344741370596 0.3262872254338311 0.3492891388741643 2.640268406458092e-07 6.578351921039864 1.3953451479690244 LKVPEWVDTVK ddPTM_KYSE-520_SHP099_60min_R1 3 LKVPEWVDTVK 11 1 P39019;M0R2L9;M0QYF7;M0R140 P39019 RPS19 40S ribosomal protein S19 0 ;; 162.32 2.1598000000000002e-05 4492450000.0 8367940.0 7206290.0 5910470.0 5202860.0 9827850.0 7480620.0 5615960.0 6268150.0 5742790.0 6376620.0 False True 7903753.687125181 6860089.011538194 6291468.353286365 5697338.250103107 10601245.88218266 7433930.675784912 6183676.0432878 6246407.250647214 4700044.099954969 6320128.107735293 1.2505685885467521 1.0854351200796128 0.9954653206453441 0.9014592984484057 1.677378322317177 1.1762310113123213 0.9784099211089586 0.9883355438637627 0.7436627897150565 1.0 22.59152237116346 -6.869334292511351 3.595470206175796 0.9124650687594196 1.178065888339189 0.2749503332999734 0.20373994942430887 0.35581093408611003 8.834829496997658 0.0970006127299307 0.06327923108714965 1.351032223424142e-07 6.869334292511351 0.26560081957976944 LKVSELKEELKK ddPTM_KYSE-520_SHP099_60min_R1 1 LKVSELKEELKK 12 3 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 66.00399999999999 0.0149 574010000.0 180400.0 153660.0 167700.0 120160.0 194460.0 180170.0 133600.0 141550.0 165400.0 131010.0 False True 170392.85238151575 146277.94295163784 178510.2103294872 131579.97027257865 209762.89567395067 179045.49219933184 147105.59181034938 141058.99608801826 135367.52939469332 129849.35332423764 1.312234893893078 1.1265203807860138 1.3747485509900228 1.0133278826889465 1.6154327326541749 1.3788708808757022 1.1328942966933566 1.0863280599926426 1.0424967543479144 1.0 16.986479303561037 -6.937009087857679 4.502834929899359 1.0575595867607468 1.299065776194843 0.3810481547269299 0.1512299933140934 0.2435695845634984 9.881951874319027 0.06797982547026103 0.04415046374248238 1.1560880501426288e-07 6.937009087857679 0.24150618943409619 LKWGMEYK ddPTM_KYSE-520_SHP099_60min_R1 2 LKWGMEYK 8 1 P62306;A0A0B4J254;F8W0W6 P62306 SNRPF Small nuclear ribonucleoprotein F 0 ; 103.55 0.0023190000000000003 1272610000.0 4025440.0 3772930.0 2609330.0 2290270.0 3562900.0 3443070.0 2460150.0 2546570.0 2777390.0 2522120.0 False True 3802140.818684303 3591672.7795166094 2777531.586875614 2507936.5722052134 3843279.959872057 3421580.5229880284 2708845.970750229 2537736.543043907 2273085.988304274 2499775.9789796676 1.520992621201289 1.4367978609757746 1.1111121997457218 1.0032645298195386 1.5374497523737174 1.3687548611394422 1.08363549115145 1.015185586381918 0.9093158776699977 1.0 21.253367380812975 -6.91684122488203 3.6186078179947123 0.9809391863760151 1.3187904439068638 0.5081629149972775 0.15996072260373986 0.22603385119358374 5.8147000186646185 0.08016521021031653 0.05110020793565236 1.211040800933148e-07 6.91684122488203 0.33785125753084877 LLAAVEAFYS(ph)PPSHDRPR ddPTM_KYSE-520_SHP099_60min_R1 4 LLAAVEAFYSPPSHDRPR 18 1 J3QK89;Q8IWX8 J3QK89 CHERP Calcium homeostasis endoplasmic reticulum protein 1 LLAAVEAFY(0.159)S(0.708)PPS(0.133)HDRPR;LLAAVEAFY(0.15)S(0.718)PPS(0.132)HDRPR;LLAAVEAFYS(0.997)PPS(0.003)HDRPR;LLAAVEAFYS(0.974)PPS(0.026)HDRPR 156.92 4.4521999999999996e-07 594963000.0 410658.0 480183.0 494326.0 421570.0 395863.0 400876.0 389289.0 401907.0 542273.0 353935.0 True False 387877.9821135723 457114.28791062284 526191.044909565 461635.8860503577 427015.16594763525 398373.9841865983 428642.1312145144 400512.8784227993 443809.8927898942 350799.41125726333 1.1056973577105491 1.3030645811870878 1.4999769897665989 1.3159539931833324 1.2172630632908277 1.135617596274828 1.2219009424168163 1.141714796462637 1.2651386477510944 1.0 18.420286800962504 -5.883052970215452 3.628110552800354 1.1668224403931264 1.3198659678337217 0.29409960180095496 0.10994877125665355 0.31209468190408063 7.8923135764505865 0.036037930753790616 0.041647740631444975 1.3090222538751678e-06 5.883052970215452 0.15304352744059524 LLAS(ph)PSSR ddPTM_KYSE-520_SHP099_60min_R1 2 LLASPSSR 8 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 LLAS(0.99)PS(0.01)SR;LLAS(0.915)PS(0.085)SR 115.82 0.0010107 1275480000.0 1736860.0 1715520.0 1427710.0 1357280.0 1454990.0 1561360.0 1303020.0 1523680.0 1763400.0 1574930.0 True False 1640512.9134554295 1633103.8441519819 1519742.4710167681 1486275.4831188866 1569489.4352393397 1551614.9730829168 1434741.9778497096 1518394.709709587 1443211.0116965072 1560977.345476998 1.0509524165798365 1.04620598683509 0.9735839379221551 0.9521441726399403 1.0054530514405002 0.9940022368542317 0.9191305575362377 0.9727205292948062 0.9245560263115131 1.0 20.57401816890447 -4.770407615589884 4.833943207714388 0.966245596883513 1.0502822377948113 0.5788000055733628 0.027657174517249826 0.11958242859106594 7.315173591432869 0.007330536652008198 0.017957077800381364 1.6966504803968954e-05 4.770407615589884 0.08403664091129837 LLASPS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 5 LLASPSSR 8 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 LLAS(0.188)PS(0.808)S(0.004)R;LLAS(0.28)PS(0.719)S(0.001)R;LLAS(0.033)PS(0.967)SR;LLAS(0.037)PS(0.962)SR;LLAS(0.326)PS(0.673)S(0.001)R 179.53 4.2651e-05 6737710000.0 4928820.0 4841860.0 4530000.0 3684550.0 3554610.0 4278110.0 3786720.0 4325060.0 5338820.0 4513950.0 True False 4655408.529240928 4609249.777819973 4822011.048256272 4034728.524199653 3834337.5840357053 4251408.728605674 4169518.612425797 4310057.37633659 4369424.868699983 4473959.914799956 1.0405566026286324 1.0302393999044284 1.0777948707821356 0.9018249159659845 0.8570344073382584 0.9502563298660593 0.9319526083890336 0.9633652197192979 0.976634782588425 1.0 22.09312089970905 -5.260442278379437 24.999754632210564 0.9352422221850697 1.0476012051199777 0.6178178047067143 0.039280988770633185 60.690225482620036 1521634.1150579557 0.011462978080370768 0.018444368527627274 5.489815153113936e-06 5.260442278379437 0.11235898293490798 LLCEHFR ddPTM_KYSE-520_SHP099_60min_R1 2 LLCEHFR 7 0 A8MU58;Q13155-2;Q13155 A8MU58 AIMP2 Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 0 ; 160.03 0.0017262 822360000.0 1132180.0 990170.0 729410.0 640740.0 1054670.0 931850.0 723160.0 736270.0 738830.0 750020.0 False True 1069375.7184551256 942600.7469245287 776428.9356972635 701635.7369544948 1137666.5287485656 926033.9784977925 796264.070161468 733716.0512167101 604677.0963886412 743375.40630673 1.438540620772006 1.2680009843311857 1.044464114779841 0.9438511564976194 1.5304064663650494 1.245715113308032 1.0711466419335847 0.9870060873576516 0.8134209058553931 1.0 19.5037314335724 -7.066568463800813 2.349253144359936 0.9180610058708835 1.2350368509798384 0.4195348526615905 0.1653086797808049 0.3367895255649613 3.630721012816028 0.1013160385369723 0.052183953786372354 8.578898631065842e-08 7.066568463800813 0.31697584510895493 LLCGS(ph)LTR ddPTM_KYSE-520_SHP099_60min_R1 2 LLCGSLTR 8 0 I3L2C7;P57678 I3L2C7 GEMIN4 Gem-associated protein 4 1 LLCGS(0.989)LT(0.011)R;LLCGS(0.89)LT(0.11)R 80.986 0.016133 0.0 859370.0 1043310.0 799720.0 704630.0 795010.0 1083590.0 849060.0 1200090.0 1364910.0 1325730.0 True False 811699.032988376 993187.821559762 851271.2307972411 771597.8233452655 857572.7640118684 1076826.9128726982 934891.2708270598 1195927.167893112 1117076.7505810806 1313985.0636023323 0.6177384016550972 0.7558592932836737 0.6478545718498913 0.5872196303585866 0.6526503137416229 0.8195122933289231 0.711493073036938 0.9101527871362854 0.8501441770719819 1.0 20.325517445601374 -7.300751906607564 0.6985247030351767 0.9867824222762676 0.6515523290343085 0.7630770051005893 0.06311804146602944 0.3308425452408217 0.3175138722588017 0.05981401632561973 0.029098213879843647 5.003202643834126e-08 7.300751906607564 -0.33523009324195907 LLCGSLTR ddPTM_KYSE-520_SHP099_60min_R1 5 LLCGSLTR 8 0 I3L2C7;P57678 I3L2C7 GEMIN4 Gem-associated protein 4 0 ;;;; 130.64 0.0060448 5618140000.0 1370880.0 1285657.0 1178954.0 1192415.0 1300881.0 1217575.0 1158013.0 1316884.0 1545109.0 1367878.0 False True 1294834.553618472 1223892.107909501 1254951.2612330958 1305741.7630873586 1403252.9336996032 1209975.6627884859 1275076.25515777 1312316.0367670376 1264556.1546282044 1355759.6651129804 0.9550620120495831 0.9027352999231687 0.9256443406055425 0.9631071027463752 1.035030743138877 0.8924706154963344 0.9404884124882954 0.9679562466240486 0.9327288509669774 1.0 20.370670024582967 LLDAEDVDVPS(ph)PDEK ddPTM_KYSE-520_SHP099_60min_R1 1 LLDAEDVDVPSPDEK 15 0 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;E9PNZ4;A0A5F9ZGX0;E9PLY5;E9PLY0 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 LLDAEDVDVPS(1)PDEK 213.02 4.3089e-14 277330000.0 794520.0 810870.0 639500.0 558580.0 631150.0 724460.0 583440.0 730320.0 873140.0 763290.0 True False 750446.3917636473 771914.5880593165 680723.1932361777 611667.2752567994 680817.9142477321 719938.3764152081 642419.8090256747 727786.6903779688 714599.786068214 756527.8444306345 0.9919613630724139 1.0203386349120596 0.899799258213017 0.8085191837415348 0.8999244631373986 0.9516350015603672 0.8491687566492176 0.9620091259505505 0.9445783011543009 1.0 19.52903365705427 -9.915485291872004 13.66944137369314 0.999996785694575 0.9227999026275507 0.1191572853381504 0.06055921104658976 0.0 0.0 0.06333670639958688 0.01536140767436652 1.2148277620016859e-10 9.915485291872004 -0.07719688306702421 LLDDAMAADKSDEWFAK ddPTM_KYSE-520_SHP099_60min_R1 1 LLDDAMAADKSDEWFAK 17 1 F6TLX2;Q9HC38-2;I3L1I0;Q9HC38 F6TLX2 GLOD4 Glyoxalase domain-containing protein 4 0 151.59 9.132799999999999e-05 0.0 397510.0 328400.0 234180.0 239120.0 296180.0 357160.0 224450.0 258610.0 303680.0 283810.0 False True 375459.32788346097 312623.17106155027 249275.6175012479 261845.89290595063 319487.68096632074 354930.83195822476 247139.59642090532 257712.94227002765 248539.36714982154 281295.6642008386 1.3347497870261935 1.111368609074417 0.8861694267824579 0.9308564838702907 1.1357717932623872 1.2617714281753463 0.8785759180577108 0.9161639337818821 0.8835520727129664 1.0 18.101727790032346 -4.378171020530556 3.2185041875247666 0.9929342030877737 1.346549748292853 0.4444594376756018 0.11855419558259414 0.2857193119537904 4.777921342796099 0.0333582024045069 0.21011862984860885 4.1862868114981254e-05 4.378171020530556 0.3536155452050793 LLDEDEKRPFVEEAK ddPTM_KYSE-520_SHP099_60min_R1 1 LLDEDEKRPFVEEAK 15 2 O60248-2;O60248 O60248-2 SOX15 Protein SOX-15 0 128.9 3.7557e-05 290350000.0 363480.0 336390.0 258790.0 230470.0 377520.0 301990.0 275550.0 286650.0 286230.0 340900.0 False True 343317.0398205838 320229.3194683156 275472.01747864013 252373.79950666754 407228.67620502954 300105.16839249764 303405.28310884576 285655.67805461294 234257.84727111922 337879.89121618663 1.0160919567744218 0.947760810256158 0.8152956853605239 0.7469334697553531 1.2052468548489952 0.8882007369905317 0.8979678607588906 0.8454355689129812 0.6933169252183563 1.0 18.366150966086934 -7.084661998542665 2.532507723406128 0.8272448907636483 0.9340643012902342 0.07983101310099294 0.13397332328226724 0.7361970459123267 9.177447878844715 0.07699571302116948 0.03988648198685504 8.228828316732838e-08 7.084661998542665 0.10681941052658595 LLDEDLDKT(ph)LEENK ddPTM_KYSE-520_SHP099_60min_R1 3 LLDEDLDKTLEENK 14 1 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-4 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 1 LLDEDLDKT(1)LEENK;LLDEDLDKT(1)LEENK;LLDEDLDKT(1)LEENK 186.75 3.0736e-10 586180000.0 1161920.0 964920.0 950340.0 940030.0 917540.0 932210.0 973510.0 1211740.0 1195750.0 1149520.0 True False 1097465.9813699056 918563.794825553 1011600.4369977635 1029370.168569676 989745.1779115335 926391.7316042589 1071921.8913420157 1207536.7567622424 978631.9424045021 1139336.1471130264 0.963250384138855 0.806227202703179 0.8878858443674121 0.9034824105054561 0.8687033940066391 0.8130978148561782 0.9408302317609845 1.0598599542567224 0.8589492617119767 1.0 20.119762028596295 -6.976085177567371 12.189567105412904 0.9757084709936742 0.8728173327721134 0.3484353108571988 0.062183152559031625 0.8222773759923789 416.76297447921206 0.024588221939913397 0.016520657322012283 1.05661025740308e-07 6.976085177567371 -0.10289113822156082 LLDEVFFSEK ddPTM_KYSE-520_SHP099_60min_R1 2 LLDEVFFSEK 10 0 P25789;H0YLS6;H0YLC2;H0YMI6;H0YMA1;H0YMZ1;H0YN18;H0YL69;H0YKT8 P25789 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type;Proteasome subunit beta type 0 ; 208.25 4.6358e-08 264960000.0 492820.0 638950.0 420820.0 310040.0 528860.0 581550.0 426330.0 447810.0 475880.0 481950.0 False True 465482.2921876863 608253.8829164968 447946.73053580656 339506.10838307516 570478.2731982197 577920.3307349811 469427.5969798375 446256.65162963996 389472.1879585656 477680.297951426 0.974464080230958 1.2733493207173232 0.9377542520737521 0.7107391907078374 1.1942679562978964 1.2098475344565043 0.9827233800368553 0.9342161557498831 0.815340698849945 1.0 18.865685848139556 -7.153880463494936 3.6206024261350054 0.9049846371436014 1.0487584263342864 0.12207154862089442 0.1577111383988272 0.5415885299693689 12.908115507923918 0.08713163893370515 0.046783982565156965 7.01648395635985e-08 7.153880463494936 0.14377378919068495 LLDGNLLDGQAEVFGS(ph)DDDHIQFVQK ddPTM_KYSE-520_SHP099_60min_R1 2 LLDGNLLDGQAEVFGSDDDHIQFVQK 26 0 Q9Y6Y0 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein 1 LLDGNLLDGQAEVFGS(1)DDDHIQFVQK;LLDGNLLDGQAEVFGS(1)DDDHIQFVQK 238.26 3.9914e-29 246530000.0 175358.0 171855.0 191887.0 141098.0 175853.0 168594.0 156405.0 148080.0 208858.0 149129.0 True False 165630.54217249338 163598.82784038578 204256.34305005544 154507.9114973396 189691.6306332989 167541.74230923108 172215.94376570135 147566.34504213172 170934.65208172225 147807.83308060636 1.1205802745390867 1.1068346273040068 1.3819047258386172 1.0453296572792552 1.2833665623786756 1.133510578007479 1.1651340810319852 0.9983662027008884 1.1564654492194861 1.0 17.17336320161437 -7.1399308706295335 5.902850929481687 1.0586647904610667 1.1805692157921919 0.25167888529735505 0.09867294368407149 0.33005651358049404 14.514398026923981 0.0450058491799519 0.025705406412302 7.245512822582539e-08 7.1399308706295335 0.12190442533112522 LLDHMAPPPVADQAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 LLDHMAPPPVADQASPR 17 0 A0A0C4DFS6;Q9C004 A0A0C4DFS6 SPRY4 Protein sprouty homolog 4 1 LLDHMAPPPVADQAS(1)PR;LLDHMAPPPVADQAS(1)PR 135.98 9.6747e-06 1083990000.0 295920.0 351860.0 274620.0 328340.0 376770.0 357170.0 277190.0 320400.0 368370.0 326220.0 True False 279504.7276981049 334956.11744737235 292322.44460753596 359545.33488097927 406419.6554719458 354940.76954451535 305211.07031370304 319288.6071819224 301483.2938520148 323329.9445953194 0.8644566714905846 1.0359576124834473 0.9040995104038616 1.112007535618104 1.2569811805727482 1.097766462641622 0.9439616571725393 0.9875008873104681 0.9324323307862874 1.0 18.302647600578883 -10.55225204025505 4.296956588965471 0.9997393813882045 1.021875482108055 0.0 0.11102267313110306 0.0003030817019202925 3.158140035729114e-05 0.11753808885286275 0.028171621132197892 2.8038059933389694e-11 10.55225204025505 0.022136100719850393 LLDIACWIHHK ddPTM_KYSE-520_SHP099_60min_R1 2 LLDIACWIHHK 11 0 A0A1B0GW44;A0A1B0GVP3;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;P07339;A0A1B0GV01;F8W787;F8WD96;C9JH19;A0A1B0GU92;A0A1B0GU03 A0A1B0GW44 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain 0 ; 130.94 0.00016082 550660000.0 896250.0 851010.0 793070.0 545300.0 1203670.0 1038690.0 688120.0 590080.0 627290.0 444970.0 False True 846533.2258699187 810126.2022079483 844192.5611568654 597125.1480495775 1298391.9810545342 1032207.1504275071 757681.8850040248 588033.1502057066 513389.9486940583 441027.9119814214 1.919454988838846 1.836904604446159 1.914147695015792 1.353939584836825 2.944013169645439 2.340457649925317 1.717990776592713 1.3333241144847945 1.1640758662814183 1.0 18.75051043906969 -7.2253776596959876 2.4469771660664974 1.128301362649787 2.041687708277721 0.5129088266178053 0.3870007314137457 0.27654780399713796 3.195756074179918 0.26419682401360883 0.11885049481706562 5.951443847019569e-08 7.2253776596959876 0.9133863456279339 LLDLPAAAS(ph)SEDIER ddPTM_KYSE-520_SHP099_60min_R1 8 LLDLPAAASSEDIER 15 0 P22466 P22466 GAL Galanin peptides;Galanin;Galanin message-associated peptide 1 LLDLPAAAS(0.958)S(0.042)EDIER;LLDLPAAAS(0.984)S(0.016)EDIER;LLDLPAAAS(0.938)S(0.062)EDIER;LLDLPAAAS(0.97)S(0.03)EDIER;LLDLPAAAS(0.957)S(0.043)EDIER;LLDLPAAAS(0.986)S(0.014)EDIER;LLDLPAAAS(0.991)S(0.009)EDIER;LLDLPAAAS(0.979)S(0.021)EDIER 250.52 3.6200000000000003e-19 1934401000.0 1342954.0 1389178.0 1181844.0 1129174.0 1209718.0 1324470.0 1280048.0 1356360.0 1623449.0 1358383.0 True False 1268457.6645075723 1322439.8036813098 1258027.5552572587 1236490.357461459 1304915.9242461207 1316203.4914428003 1409447.743904597 1351655.1037368053 1328671.5854188956 1346348.783425982 0.9421464037571272 0.982241615219622 0.9343994444411521 0.9184026997187369 0.9692257610435615 0.9776095968932562 1.0468667267021627 1.0039412672081305 0.9868702685183075 1.0 20.360620770457945 -6.342034763768497 2.559574122884682 1.0094456915170809 0.9471956971755049 0.6189359170322057 0.022066554341703282 0.19759390621682665 2.5369592161300227 0.008871410263848483 0.007790029681999403 4.5495164138993067e-07 6.342034763768497 -0.062249994341575965 LLDLPAAAS(ph)SEDIERS ddPTM_KYSE-520_SHP099_60min_R1 5 LLDLPAAASSEDIERS 16 1 P22466 P22466 GAL Galanin peptides;Galanin;Galanin message-associated peptide 1 LLDLPAAAS(0.851)S(0.149)EDIERS;LLDLPAAAS(0.932)S(0.068)EDIERS;LLDLPAAAS(0.908)S(0.091)EDIERS(0.001);LLDLPAAAS(0.978)S(0.022)EDIERS;LLDLPAAAS(0.971)S(0.029)EDIERS 192.16 3.5025e-12 1249598000.0 1169640.0 1453920.0 1227510.0 940630.0 939030.0 1270390.0 1057420.0 1181730.0 1679710.0 1224210.0 True False 1104757.737580465 1384071.5008215872 1306637.258685441 1030027.1923892784 1012926.3186501614 1262461.024782757 1164314.3330246976 1177630.8544478544 1374717.0060432917 1213364.451820968 0.9104912674196854 1.1406890145367528 1.0768712209464295 0.8489017383387618 0.834807973094978 1.040463170721795 0.9595751146964476 0.9705499882417966 1.1329794638207609 1.0 20.21058151950399 -9.375478535181378 11.422209678162671 0.9999999999995189 0.988760149294976 0.0004712558484759599 0.1024155241651341 0.0 0.0 0.10356946918240421 0.025119285942835638 4.212321054558499e-10 9.375478535181378 -0.01123985070454292 LLDPEDVDVS(ph)SPDEK ddPTM_KYSE-520_SHP099_60min_R1 1 LLDPEDVDVSSPDEK 15 0 Q03001;F8W9J4;Q03001-14;F6QMI7;E9PHM6;A0A494C1D7;E7ETB9;Q03001-13;Q5T0V7 Q03001 DST Dystonin 1 LLDPEDVDVS(0.719)S(0.281)PDEK 142.85 1.0072000000000001e-05 131000000.0 323120.0 314050.0 302750.0 231390.0 249010.0 288300.0 246830.0 317540.0 346720.0 320930.0 True False 305195.889476249 298962.56660133967 322265.74941712717 253381.2360300596 268605.670326908 286500.61276054493 271781.9852286567 316438.52785439324 283764.38809992786 318086.8098797619 0.9594735776425759 0.9398772829164113 1.0131377328690396 0.7965788840028882 0.8444413977066262 0.9006994438683055 0.854427083384537 0.994818137771913 0.8920973120739962 1.0 18.27906102325358 -9.823857712319846 11.298972396679094 1.0000057100833355 0.909724485859681 0.14654802339180928 0.0646785689130498 0.0 0.0 0.06527237224586338 0.015830875600254674 1.5001762569797366e-10 9.823857712319846 -0.09028122422365448 LLDT(ph)PIKNLLDT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 1 LLDTPIKNLLDTPVK 15 1 E7EPB1;E7EQS8;Q6N021-2;Q6N021-3;Q6N021 E7EPB1 TET2 Methylcytosine dioxygenase TET2 2 LLDT(1)PIKNLLDT(1)PVK 105.32 0.00055008 113640000.0 344300.0 266660.0 249130.0 255950.0 286680.0 282270.0 255020.0 264910.0 286600.0 271080.0 True False 325200.99265496637 253849.25333518008 265189.3184220935 280275.41104582633 309240.0850139271 280508.2482272598 280799.910355354 263991.08904045913 234560.66459806016 268678.4420970485 1.210372481382416 0.9448069273957156 0.9870137564900175 1.0431630050340581 1.1509672402455997 1.0440296066847754 1.0451151501538303 0.9825540411057755 0.8730163193120467 1.0 18.035521043173866 -7.380218065532887 3.1219826707920464 0.9344026852781833 1.0562399401749925 0.3055810068489192 0.07666099791750723 0.3343740519848261 6.08786783357452 0.05059293727859044 0.02087925991470921 4.166601198726171e-08 7.380218065532887 0.12183725489680919 LLDVVHPAAK ddPTM_KYSE-520_SHP099_60min_R1 2 LLDVVHPAAK 10 0 Q99832-3;Q99832;F8WAM2 Q99832-3 CCT7 T-complex protein 1 subunit eta 0 ; 122.26 0.00082606 964910000.0 3019700.0 2810500.0 2159700.0 2062800.0 2894000.0 2915000.0 2079150.0 2703100.0 2579100.0 2448200.0 False True 2852191.2213772885 2675479.361353496 2298917.7176421774 2258847.891796567 3121741.335392441 2896806.403735656 2289330.7725485633 2693723.577008281 2110800.4538201573 2426510.8526707753 1.1754289984889132 1.1026035009934902 0.9474170350863419 0.9309036839090715 1.2865144748709656 1.1938155564180737 0.9434661172146737 1.1101222044992685 0.8698912067493427 1.0 21.210451881954327 -7.439189587284561 1.6537195466775176 0.9532772386245376 1.0903806350425675 0.16903004323499027 0.11863452168219887 0.7941395417527758 3.8522246800253175 0.10765700916300637 0.03689162974737058 3.6375620701631734e-08 7.439189587284561 0.13710339641802993 LLEAIS(ph)SLDGK ddPTM_KYSE-520_SHP099_60min_R1 3 LLEAISSLDGK 11 0 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 LLEAIS(0.5)S(0.5)LDGK;LLEAIS(0.5)S(0.5)LDGK;LLEAIS(0.535)S(0.465)LDGK 186.76 9.7831e-07 240516000.0 1174200.0 1118710.0 1048460.0 886742.0 876474.0 969140.0 847726.0 1081960.0 1270260.0 1012070.0 True False 1109064.7852903304 1064965.4923820565 1116045.4091953125 971017.6930712974 945447.5173451119 963091.2377757705 933422.4170884746 1078206.9332913621 1039612.8046487494 1003103.8471785457 1.1056330692079626 1.0616702302334007 1.112592093365448 0.9680131282543699 0.942522072868522 0.9601111993386132 0.9305341811956303 1.0748706989052637 1.0363959898797053 1.0 19.9360395392365 -5.2631780030639375 24.999189439325175 0.9852241632477807 1.0901356439327916 0.5633677093023822 0.04262566173294564 123.18337008323056 1771232.9453768048 0.013058053504053337 0.02060305824533892 5.455342186790083e-06 5.2631780030639375 0.10491148068501088 LLEAISS(ph)LDGK ddPTM_KYSE-520_SHP099_60min_R1 4 LLEAISSLDGK 11 0 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 1 LLEAIS(0.235)S(0.765)LDGK;LLEAIS(0.41)S(0.59)LDGK;LLEAIS(0.23)S(0.77)LDGK;LLEAIS(0.377)S(0.623)LDGK 170.79 1.2168e-05 408073000.0 2017140.0 1887530.0 1818600.0 1433780.0 1505940.0 1710940.0 1503990.0 1939480.0 2132460.0 1756990.0 True False 1905245.2231310995 1796850.2255597075 1935829.8658628808 1570046.0201183262 1624448.9103734938 1700261.3888190314 1656027.9867278999 1932752.396558034 1745259.018942006 1741424.4355175353 1.0940728660241168 1.0318278467395572 1.111635869108251 0.901587222561123 0.9328276767235798 0.9763624272986209 0.9509617259021311 1.109868655302082 1.0022019809451743 1.0 20.731836441692206 -5.243105830151178 24.975080073932855 0.9829770594873585 1.0744437597487242 0.3928410787435228 0.055275251644129234 971.4401671591463 1323352.7814473792 0.0161568690859275 0.027912613519354895 5.713393940503264e-06 5.243105830151178 0.09146670026136572 LLEDGEDFNLGDALDS(ph)SNSMQTIQK ddPTM_KYSE-520_SHP099_60min_R1 1 LLEDGEDFNLGDALDSSNSMQTIQK 25 0 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 1 LLEDGEDFNLGDALDS(0.548)S(0.396)NS(0.056)MQTIQK 129.93 4.6507e-05 180490000.0 142730.0 110200.0 109200.0 77384.0 67846.0 90130.0 87045.0 114090.0 140830.0 120310.0 True False 134812.4823747989 104905.82658642765 116239.20672617767 84738.55209365199 73185.09420906554 89567.46523797413 95844.35807733433 113694.24841880631 115258.82203539705 119244.14699976363 1.1305584866573464 0.8797566104995962 0.9748001025694626 0.7106307036924836 0.6137416053570379 0.7511267218688031 0.8037657234239288 0.9534576855921632 0.9665784437673534 1.0 16.86355892891374 -9.967819204373995 19.96720344333192 0.9999999999509688 0.8541330791330877 0.06952836135346618 0.14341046401324012 0.0 0.0 0.15070558902027884 0.03655147422950206 1.076913436496662e-10 9.967819204373995 -0.1458669208178811 LLEDGEDFNLGDALDSSNS(ph)MQTIQK ddPTM_KYSE-520_SHP099_60min_R1 1 LLEDGEDFNLGDALDSSNSMQTIQK 25 0 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 1 LLEDGEDFNLGDALDS(0.007)S(0.216)NS(0.777)MQTIQK 243.52 6.534799999999999e-29 138630000.0 115200.0 97012.0 73325.0 66457.0 68325.0 97020.0 72726.0 85684.0 116730.0 96288.0 True False 108809.62635449333 92351.3979020193 78051.64682414805 72773.05329897442 73701.78878392835 96414.46219225839 80077.8538173612 85386.78220279604 95534.77452383643 95434.96323093037 1.140144268628253 0.9676893538330437 0.8178516990181183 0.7625408009314217 0.7722724071846415 1.0102635232221744 0.8390829849600451 0.8947117420287565 1.0010458566706264 1.0 16.5422302835056 -9.345791759834825 13.775969117476983 0.9999999993980996 0.9023888359002777 0.04574905513365313 0.11395736628152035 0.0 0.0 0.1157807910851275 0.028080966533032492 4.510329187909539e-10 9.345791759834825 -0.09761116349782184 LLEDS(ph)DS(ph)EDEAAPSPLQPALRPNPTAILDEAPKPK ddPTM_KYSE-520_SHP099_60min_R1 8 LLEDSDSEDEAAPSPLQPALRPNPTAILDEAPKPK 35 2 Q9BW85 Q9BW85 CCDC94 Coiled-coil domain-containing protein 94 2 LLEDS(0.991)DS(0.982)EDEAAPS(0.014)PLQPALRPNPT(0.012)AILDEAPKPK;LLEDS(0.958)DS(0.914)EDEAAPS(0.039)PLQPALRPNPT(0.089)AILDEAPKPK;LLEDS(1)DS(1)EDEAAPSPLQPALRPNPTAILDEAPKPK;LLEDS(1)DS(1)EDEAAPSPLQPALRPNPTAILDEAPKPK;LLEDS(1)DS(1)EDEAAPSPLQPALRPNPTAILDEAPKPK;LLEDS(1)DS(1)EDEAAPSPLQPALRPNPTAILDEAPKPK;LLEDS(0.981)DS(0.983)EDEAAPS(0.036)PLQPALRPNPTAILDEAPKPK;LLEDS(1)DS(1)EDEAAPSPLQPALRPNPTAILDEAPKPK 222.42 6.9754e-23 23199382000.0 2175790.0 2017565.0 1924971.0 1936877.0 2039542.0 2059434.0 1837982.0 1860546.0 2480089.0 1884068.0 True False 2055094.591370169 1920638.1489731967 2049057.7107224984 2120957.2077366957 2200042.351993426 2046580.3084977441 2023783.1575357008 1854092.2001807026 2029767.355555959 1867376.6233027256 1.1005249641261103 1.0285221122540724 1.0972921504706659 1.1357950941816313 1.1781460282512979 1.0959654752869674 1.083757359003642 0.9928860504323291 1.0869619605529932 1.0 20.832581497302964 -7.064277282767442 4.736767391863104 1.0300783966992024 1.1057792136221276 0.4126229909381425 0.04227218051219837 0.24563413039590154 10.860943063232472 0.021888902601377828 0.012594290340303748 8.62427740153519e-08 7.064277282767442 0.07570081692292518 LLEDS(ph)EES(ph)SEETVSR ddPTM_KYSE-520_SHP099_60min_R1 4 LLEDSEESSEETVSR 15 0 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 2 LLEDS(1)EES(0.976)S(0.024)EETVSR;LLEDS(1)EES(0.994)S(0.006)EETVSR;LLEDS(1)EES(0.804)S(0.196)EETVSR;LLEDS(1)EES(0.988)S(0.012)EETVSR 298.75 1.6708e-36 2484810000.0 3179840.0 2919440.0 2667030.0 2642190.0 2994390.0 2763800.0 2599020.0 2786090.0 3490360.0 2789790.0 True False 3003447.936346118 2779185.7202312197 2838951.0211988795 2893302.9431966124 3230031.4572514733 2746550.099020445 2861754.305590828 2776425.7040682943 2856598.608815366 2765074.6310237744 1.0862086334480185 1.0051033303221262 1.0267176839808307 1.046374268070067 1.1681534454842355 0.9933005309167836 1.034964580515231 1.0041051597367978 1.0331000027141057 1.0 21.39888698951466 LLEEEIQAPT(ph)SSKR ddPTM_KYSE-520_SHP099_60min_R1 1 LLEEEIQAPTSSKR 14 1 Q8N7H5;B4DGJ5;Q8N7H5-3;Q8N7H5-2 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog 1 LLEEEIQAPT(0.412)S(0.412)S(0.176)KR 75.23899999999999 0.028173 129750000.0 138780.0 109840.0 107500.0 103760.0 96139.0 128700.0 111510.0 106160.0 139630.0 114420.0 True False 131081.59674892895 104563.12152679864 114429.62200608141 113621.31920341842 103704.59234391636 127896.73556115899 122782.51903272497 105791.75573793019 114276.71178585867 113406.32781741285 1.1558578720578427 0.9220219324546687 1.0090232547721332 1.0018957618163222 0.9144515508066133 1.127774243489094 1.0826778487211757 0.932855844766067 1.0076749153702178 1.0 16.791141616093537 -7.904884913787104 0.003259605630711993 3.1685058592034374e-08 2.0129746232461154 0.016031232663403783 0.07881253247308599 113559.87289833938 270.0764275679459 83686.0196916578 83086.99572483056 1.2448444466148265e-08 7.904884913787104 2.012974591561057 LLEEEIQAPTSS(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 1 LLEEEIQAPTSSKR 14 1 Q8N7H5;B4DGJ5;Q8N7H5-3;Q8N7H5-2 Q8N7H5 PAF1 RNA polymerase II-associated factor 1 homolog 1 LLEEEIQAPT(0.257)S(0.257)S(0.487)KR 83.41799999999999 0.0033881000000000002 153110000.0 128750.0 96107.0 104990.0 95660.0 115890.0 114220.0 107320.0 99524.0 142290.0 117030.0 True False 121607.98084323807 91489.875460452 111757.82338993941 104751.49763877214 125009.88367609872 113507.11061224234 118168.95294226565 99178.77447307618 116453.7228390018 115993.20524796212 1.0484060732977685 0.7887520244385986 0.9634859486038979 0.9030830505531919 1.0777345397849933 0.9785668942382859 1.018757544372124 0.8550395194361494 1.0039702117900373 1.0 16.823680770805343 LLEEHAK ddPTM_KYSE-520_SHP099_60min_R1 1 LLEEHAK 7 0 A0A2R8Y5M6;P51572;P51572-2 A0A2R8Y5M6 BCAP31 B-cell receptor-associated protein 31 0 81.297 0.012103000000000001 0.0 65694.0 75862.0 59998.0 53524.0 75448.0 78509.0 53279.0 65219.0 80482.0 62859.0 False True 62049.82286225767 72217.47564881647 63865.56708019417 58610.90486742261 81385.32835960221 78018.99620956514 58664.961272931185 64992.77051122904 65868.4975861167 62302.11816356197 0.9959504538731421 1.1591496048211984 1.0250946350255326 0.9407530047943344 1.3063011460692397 1.2522687592216624 0.9416206543558897 1.0431871728759412 1.0572433093396905 1.0 15.926993592752483 -6.790752655860712 24.998885588718075 1.0141117755310063 1.1122661585351437 0.17622367919092097 0.10869831812305686 440.91581811299875 376016.90350320144 0.048734401976703846 0.032862666164622155 1.6190018467429044e-07 6.790752655860712 0.09815438300413737 LLEENETEAVTVPTPS(ph)PTPVR ddPTM_KYSE-520_SHP099_60min_R1 10 LLEENETEAVTVPTPSPTPVR 21 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 LLEENETEAVTVPT(0.021)PS(0.974)PT(0.004)PVR;LLEENETEAVTVPTPS(0.998)PT(0.002)PVR;LLEENETEAVTVPT(0.001)PS(0.977)PT(0.022)PVR;LLEENETEAVTVPT(0.023)PS(0.955)PT(0.023)PVR;LLEENETEAVTVPT(0.034)PS(0.964)PT(0.002)PVR;LLEENETEAVTVPTPS(0.97)PT(0.03)PVR;LLEENETEAVTVPT(0.005)PS(0.971)PT(0.024)PVR;LLEENETEAVTVPTPS(0.996)PT(0.004)PVR;LLEENETEAVTVPTPS(0.985)PT(0.015)PVR;LLEENETEAVTVPTPS(0.997)PT(0.003)PVR 345.35 2.2056999999999996e-65 4513340000.0 4045300.0 5959440.0 4105770.0 3346480.0 3502940.0 4912120.0 3392880.0 4882780.0 5727450.0 5186820.0 True False 3820899.14489438 5673139.557098197 4370434.503664271 3664528.453044102 3778601.448997791 4881461.637021601 3735865.421717799 4865842.775829414 4687489.457265028 5140868.810084892 0.7432399631359752 1.103537119245125 0.8501353886118912 0.7128227909366917 0.7350122301478053 0.9495402075706718 0.7266992330924912 0.9465020321631322 0.9118088071163252 1.0 22.293580765723856 -7.430352074960817 24.999999997067633 0.9469973453598841 0.8388284782687954 0.18384241737505602 0.11613289443938983 111.11138006814122 30014.531470255013 0.06508136851466154 0.03126405095494895 3.712341540225022e-08 7.430352074960817 -0.10816886709108875 LLELKS(ph)PTELMK ddPTM_KYSE-520_SHP099_60min_R1 1 LLELKSPTELMK 12 1 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 LLELKS(0.5)PT(0.5)ELMK 74.76899999999999 0.011459 1010600000.0 996190.0 892420.0 979920.0 697950.0 838740.0 862090.0 813870.0 949300.0 1165200.0 1099700.0 True False 940929.3548444678 849546.8036502701 1043087.2111274347 764282.9581536815 904744.066222203 856709.3765339516 896143.9222057563 946007.0998682857 953629.0523016739 1089957.5135536545 0.8632715891619471 0.7794311182648223 0.9569980463977851 0.7012043576467889 0.8300727826283898 0.7860025421915484 0.8221824346932606 0.8679302524223732 0.8749231419053201 1.0 20.05584046929879 -8.182031277132877 1.087767803447573 0.9990964696913959 0.8184681023911121 0.4289687337198621 0.06204829960169193 0.6940461655768858 1.6779700194905942 0.056688104371310694 0.018099607269467844 6.576104756878282e-09 8.182031277132877 -0.18062836730028375 LLELKSPT(ph)ELMK ddPTM_KYSE-520_SHP099_60min_R1 1 LLELKSPTELMK 12 1 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 LLELKS(0.087)PT(0.913)ELMK 75.695 0.044181 945490000.0 1093000.0 1148700.0 1052600.0 983460.0 979920.0 1101600.0 976900.0 1121500.0 1373800.0 1287700.0 True False 1032369.1111585177 1093514.7277661473 1120452.2802195465 1076927.7427119692 1057034.1290178844 1094724.5057822291 1075654.585625226 1117609.778260067 1124352.550679744 1276291.9798154414 0.808881609761274 0.8567904092951171 0.8778965142298942 0.8437941785606916 0.8282071389109075 0.8577382942894713 0.8427966348113942 0.8756693577449882 0.8809524532484575 1.0 20.28352698435517 -8.5763642141949 0.780457542758066 1.0018702726120283 0.8453793325421003 0.8688339700476375 0.017843473178591862 0.6793558503796058 0.6290857649294871 0.020295805409817805 0.006353688287234288 2.652380252268718e-09 8.5763642141949 -0.15649094006992803 LLELQEVDS(ph)LLR ddPTM_KYSE-520_SHP099_60min_R1 13 LLELQEVDSLLR 12 0 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 1 LLELQEVDS(1)LLR;LLELQEVDS(1)LLR;LLELQEVDS(1)LLR;LLELQEVDS(1)LLR;LLELQEVDS(1)LLR;LLELQEVDS(1)LLR;LLELQEVDS(1)LLR;LLELQEVDS(1)LLR;LLELQEVDS(1)LLR;LLELQEVDS(1)LLR;LLELQEVDS(1)LLR;LLELQEVDS(1)LLR;LLELQEVDS(1)LLR 204.17 1.7204999999999998e-08 1472222400.0 999695.0 1000596.0 821099.0 1011300.0 933490.0 1098250.0 859132.0 1236581.0 1553364.0 1047714.0 True False 944239.925507424 952525.8662347842 874028.3553448509 1107413.6479415668 1006950.3521684471 1091395.4143748463 945981.4468803082 1232291.5891311765 1271312.2547198215 1038432.0690691574 0.9092938802957362 0.9172731607649802 0.8416808199387787 1.0664285906869613 0.9696834122920238 1.051003187289049 0.910970948468761 1.1866848355673312 1.2242613576634014 1.0 19.98597541206184 -6.277399574993967 0.6453783219651943 1.1257198643993924 0.896198257831198 0.41131428043714613 0.09095907984671034 0.7758647283192538 0.7056151259915809 0.07319392614877743 0.07704893496703462 5.279592764510566e-07 6.277399574993967 -0.22952160656819443 LLELTSS(ph)YSPDVSDYK ddPTM_KYSE-520_SHP099_60min_R1 2 LLELTSSYSPDVSDYK 16 0 P38432 P38432 COIL Coilin 1 LLELT(0.001)S(0.013)S(0.361)Y(0.264)S(0.361)PDVS(0.001)DYK;LLELTS(0.025)S(0.929)YS(0.046)PDVSDYK 210.9 9.0268e-18 171866000.0 335830.0 347620.0 299040.0 281000.0 263650.0 326270.0 286720.0 350800.0 355440.0 357050.0 True False 317200.8404394924 330919.8134117424 318316.59688091755 307706.1555142694 284397.75503670255 324233.6279062885 315704.45571754035 349583.15667733585 290901.05591323954 353886.8147806969 0.8963341588074177 0.9351007146644129 0.8994870212335485 0.8695044366232024 0.803640438576225 0.916207144104014 0.8921057313570213 0.9878388854186952 0.8220172206571484 1.0 18.43292848484402 -6.896318625214707 2.7311350381910002 0.9293863031899748 0.884264447781763 0.12786888201880942 0.05566849824691133 0.6348402101031537 9.543066799128109 0.026826154151999446 0.016506938836396565 1.2696422755547656e-07 6.896318625214707 -0.045121855408211786 LLELTSSYS(ph)PDVSDYK ddPTM_KYSE-520_SHP099_60min_R1 4 LLELTSSYSPDVSDYK 16 0 P38432 P38432 COIL Coilin 1 LLELT(0.02)S(0.074)S(0.366)Y(0.055)S(0.484)PDVSDYK;LLELTS(0.005)S(0.408)YS(0.587)PDVSDYK;LLELT(0.005)S(0.014)S(0.126)Y(0.084)S(0.77)PDVS(0.001)DYK;LLELTSS(0.002)YS(0.998)PDVSDYK 287.01 2.6341e-37 390005000.0 567478.0 571192.0 467589.0 459522.0 420545.0 573684.0 510211.0 570996.0 619881.0 559818.0 True False 535998.8641006536 543751.078943328 497730.53510885243 503194.8327196723 453639.49892626645 570103.4253587247 561788.1070595075 569015.3481474683 507326.2363283665 554858.4480518131 0.9660100985803168 0.9799816166673057 0.8970405638707587 0.9068886568934129 0.8175769883635353 1.027475435150062 1.0124890574019834 1.0255144355201982 0.9143345264177938 1.0 19.081760241682183 -6.303864204101227 24.998509005410657 0.9985902500430909 0.9159112452039709 0.3983973748313324 0.050572242078125204 536.8244682050065 316318.1711512629 0.018658181991739176 0.016455095078059073 4.967476210164091e-07 6.303864204101227 -0.08267900483911994 LLEPLVTQVTTLVNTNS(ph)KGPSNK ddPTM_KYSE-520_SHP099_60min_R1 4 LLEPLVTQVTTLVNTNSKGPSNK 23 1 P35221;G3XAM7;P35221-2;E5RIB1;E5RG03;E5RGY6;E5RIE0;E5RJL0;E5RFM3;E5RHV7 P35221 CTNNA1 Catenin alpha-1 1 LLEPLVT(0.028)QVT(0.148)T(0.148)LVNT(0.06)NS(0.572)KGPS(0.044)NK;LLEPLVT(0.006)QVT(0.006)T(0.006)LVNT(0.046)NS(0.933)KGPS(0.004)NK;LLEPLVTQVTTLVNT(0.013)NS(0.987)KGPSNK;LLEPLVTQVTTLVNT(0.001)NS(0.965)KGPS(0.034)NK 270.45 8.508099999999999e-38 560007000.0 458844.0 615580.0 557620.0 423099.0 494925.0 638887.0 373797.0 529565.0 627615.0 373477.0 True False 433391.00863716344 586006.6127955825 593565.0774235448 463310.20175064745 533872.781761957 634899.4692498997 411584.0486671646 527728.0626164004 513655.93688664085 370168.2843407095 1.170794546618323 1.583081634990132 1.6035006307488433 1.251620469257189 1.4422434453367996 1.7151644160457757 1.1118836109911978 1.4256436462575763 1.3876281643131336 1.0 18.497821766229613 -9.631957995477626 0.42683754394674756 0.8851572304807579 1.445013388980335 0.31574177724642016 0.18215372480086403 12.065101079617564 1.8905354043447775 2.097430795517269 0.10976931491464395 2.33368376289572e-10 9.631957995477626 0.559856158499577 LLEPPVLTLDPNDENLILEIPDEKEEATSNS(ph)PSKESK ddPTM_KYSE-520_SHP099_60min_R1 1 LLEPPVLTLDPNDENLILEIPDEKEEATSNSPSKESK 37 2 P21675-10;P21675-11;P21675-8;P21675-6;P21675-7;P21675-3;P21675-5;P21675-9;P21675;P21675-2;P21675-12;P21675-4 P21675-10 TAF1 Transcription initiation factor TFIID subunit 1 1 LLEPPVLTLDPNDENLILEIPDEKEEAT(0.094)S(0.094)NS(0.676)PS(0.131)KES(0.005)K 199.99 5.1852e-16 233910000.0 77956.0 94926.0 78145.0 64734.0 51893.0 75571.0 44609.0 64837.0 121050.0 66239.0 True False 73631.6252785668 90365.61247316918 83182.35173642088 70886.2998970132 55976.68386921906 75099.33335736094 49118.513061885285 64612.09558006958 99070.3714221744 65652.17399316213 1.1215413108214172 1.3764298571831153 1.2670159520549096 1.0797250964514324 0.8526249850469415 1.143897129212854 0.7481627808243049 0.9841577460450758 1.5090189006154295 1.0 16.00255516457811 -5.323186302504991 4.372827266336828 1.0253225069643144 1.2681544834415024 0.18890538729105122 0.19775014548820422 0.32935232803733816 12.799512520064944 0.056770389079286845 0.0881274412444943 4.751313616170593e-06 5.323186302504991 0.24283197647718802 LLEPVLLLGK ddPTM_KYSE-520_SHP099_60min_R1 2 LLEPVLLLGK 10 0 M0R210;P62249;M0QX76;M0R1M5;M0R3H0;Q6IPX4 M0R210 RPS16 40S ribosomal protein S16 0 ; 161.92 0.00052028 0.0 191938.0 248410.0 205170.0 163429.0 245270.0 250760.0 161013.0 162825.0 177165.0 186983.0 False True 181290.81652108292 236476.01072898856 218395.5864836071 178961.24302327938 264571.3536045974 249194.91382530108 177289.76537544763 162260.19807864077 144996.30196620812 185326.4760905729 0.978224052738597 1.275996909440062 1.1784370538447655 0.9656539464756094 1.4275960952028024 1.3446266236860531 0.9566348484865296 0.8755370603353017 0.7823830950918498 1.0 17.49970947666545 -6.915132920028612 5.928615435763384 0.8799733455780242 1.1972970518562391 0.4996247266928311 0.14399252521250197 0.17365959446196177 9.521738257417894 0.06298554523432999 0.042077146390358526 1.215813832108312e-07 6.915132920028612 0.31732370627821493 LLEQEALMEQQDPKS(ph)PSHK ddPTM_KYSE-520_SHP099_60min_R1 2 LLEQEALMEQQDPKSPSHK 19 1 Q96PY5-3;Q96PY5;C9IZY8 Q96PY5-3 FMNL2 Formin-like protein 2 1 LLEQEALMEQQDPKS(0.996)PS(0.004)HK;LLEQEALMEQQDPKS(0.807)PS(0.193)HK 147.26 1.2232e-06 475270000.0 197502.0 245056.0 233652.0 171954.0 230665.0 226329.0 205714.0 315293.0 463360.0 221863.0 True False 186546.17034952386 233283.1419234447 248713.5817764182 188296.4564601449 248817.02319568009 224916.39675852007 226509.57869516645 314199.3221729391 379225.50435504946 219897.4664268019 0.8483325132425762 1.060872349800804 1.131043416815393 0.8562920688439303 1.1315138243236866 1.0228239570617739 1.0300690698069754 1.4288446669190151 1.7245560420373633 1.0 17.746471456553543 -7.258499015204405 6.89330181468434 1.4340299592353833 1.0165656840697295 0.4448950517875149 0.18845314653524714 0.10590328574773201 33.51308864146006 0.09035471758511467 0.047660961264867255 5.514434528200752e-08 7.258499015204405 -0.4174642751656539 LLEQWEKDDDIEEGDLPEHK ddPTM_KYSE-520_SHP099_60min_R1 6 LLEQWEKDDDIEEGDLPEHK 20 1 Q14696 Q14696 MESDC2 LDLR chaperone MESD 0 ;;;;; 179.95 1.3319000000000001e-09 3393300000.0 1773088.0 1429099.0 986014.0 931338.0 1568088.0 1562023.0 1185069.0 1203550.0 1253283.0 1305114.0 False True 1674731.2740767004 1360442.9389186678 1049574.0401181816 1019852.0835030199 1691487.6043997456 1552273.8350539887 1304867.3396788824 1199375.1659606805 1025718.3998934072 1293551.7053233269 1.2946767161951958 1.0517112948172578 0.8113893211990607 0.7884123064474682 1.307630454537535 1.2000091134091881 1.0087477248176386 0.9271953807682495 0.792947352372765 1.0 20.30290629131953 -7.2284342879849355 3.4626576520670116 0.8901297032809163 1.0620899182855257 0.1574741839541628 0.1715748937742081 0.5098932756224069 12.767451342835095 0.10450987755512563 0.05204225120078819 5.9097037706435766e-08 7.2284342879849355 0.17196021500460934 LLES(ph)PGVEAGEGEAEKEEAGAQGR ddPTM_KYSE-520_SHP099_60min_R1 1 LLESPGVEAGEGEAEKEEAGAQGR 24 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-3 A0A0G2JHC2 PPP1R18 Phostensin 1 LLES(1)PGVEAGEGEAEKEEAGAQGR 147.23 5.2971e-07 248400000.0 166480.0 142390.0 136420.0 125460.0 133420.0 174830.0 163460.0 193560.0 206680.0 139200.0 True False 157245.02253034775 135549.37066825276 145213.8514797174 137383.68067907562 143919.39494404267 173738.82112010446 179984.13201586623 192888.58553724375 169152.12197881012 137966.79629596137 1.1397309117262637 0.9824782071294688 1.0525275311040052 0.99577350759356 1.0431451538188363 1.2592799556453151 1.304546723182372 1.3980797606075173 1.226035006393503 1.0 17.073961577795718 -6.262692218741172 6.015752437620542 1.267461920612737 1.036641792435862 0.45748360244506303 0.10352677210504667 0.11854293927183959 19.618321047577343 0.034020044926347456 0.031842952552634154 5.461447726997343e-07 6.262692218741172 -0.23082012817687514 LLES(ph)PGVEAGEGEAEKEEAGAQGRPLR ddPTM_KYSE-520_SHP099_60min_R1 2 LLESPGVEAGEGEAEKEEAGAQGRPLR 27 2 A0A0G2JHC2;Q6NYC8;Q6NYC8-3 A0A0G2JHC2 PPP1R18 Phostensin 1 LLES(1)PGVEAGEGEAEKEEAGAQGRPLR;LLES(1)PGVEAGEGEAEKEEAGAQGRPLR 127.14 9.1629e-05 1626100000.0 866450.0 913300.0 848300.0 1132010.0 875420.0 782870.0 912620.0 783210.0 1134550.0 792470.0 True False 818386.2912747472 869423.6971087524 902982.7753279908 1239595.8900487819 944310.5735415524 777983.8179391182 1004876.5359128814 780493.2273125882 928544.3196780499 785449.3323323304 1.0419339066017321 1.1069125165936124 1.1496384784574887 1.5781996865003358 1.2022552374416005 0.9904952310914265 1.2793651920601665 0.9936901021928106 1.1821823273066006 1.0 19.583158687765923 -6.023558117709478 24.562450476819336 1.1001668857334284 1.2291911941341143 0.13570752320141866 0.15823718808794313 1369.1288314448161 1427495.8902382643 0.054234649968457956 0.054585289760641344 9.472004207421207e-07 6.023558117709478 0.1290243084006859 LLETTDRPDGHQNNLR ddPTM_KYSE-520_SHP099_60min_R1 4 LLETTDRPDGHQNNLR 16 1 Q14974;J3KTM9;Q14974-2 Q14974 KPNB1 Importin subunit beta-1 0 ;;; 245.19 3.0224999999999997e-23 3075910000.0 2872200.0 2805650.0 1777890.0 1776620.0 2613120.0 2578890.0 1763320.0 2061600.0 1882400.0 1945620.0 False True 2712873.340411252 2670862.362633494 1892495.6341245763 1945469.4306397208 2818757.6773810284 2562794.190919324 1941573.5939448008 2054448.790781057 1540603.6114423862 1928383.320469457 1.4068122823997533 1.3850266875277077 0.9813897548459691 1.008860328747349 1.4617206275642405 1.3289858731486135 1.0068400682246788 1.0653736572876549 0.7989094258849597 1.0 20.878960425649886 -6.844238529684971 5.6670911117494285 0.9670416773385072 1.2520885848686147 0.4412606609228866 0.16237066047820436 0.23314145196093514 12.17425375215563 0.07498983048755002 0.05041431174519291 1.4314015076770364e-07 6.844238529684971 0.28504690753010753 LLEVEHPAAK ddPTM_KYSE-520_SHP099_60min_R1 2 LLEVEHPAAK 10 0 P17987;E7ERF2;F5H726;F5GZI8;F5H676;F5H136 P17987 TCP1 T-complex protein 1 subunit alpha 0 ; 94.29700000000001 0.0051159 756810000.0 1452690.0 1379620.0 1022220.0 889650.0 1335050.0 1417320.0 1016190.0 1245880.0 1225350.0 1151020.0 False True 1372106.3898342808 1313340.9843481616 1088113.9368098297 974202.068516974 1440110.8396045894 1408473.9801518389 1118916.4022586748 1241558.3330705783 1002857.3285597799 1140822.8582800103 1.2027339563505686 1.1512225362737318 0.9537974532263067 0.8539468344680206 1.2623439556390095 1.234612341372051 0.980797670854559 1.0883007156277043 0.879064897132025 1.0 20.121643363298585 -7.746065921316202 24.108522536397153 0.9395324940977996 1.0873329477217 0.1854671632384126 0.12676100235763788 249.89556606801025 391889.9030064176 0.09212693106528694 0.03450393364276206 1.7944612258946824e-08 7.746065921316202 0.14780045362390037 LLEVQPQVANS(ph)PSSAAQK ddPTM_KYSE-520_SHP099_60min_R1 2 LLEVQPQVANSPSSAAQK 18 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 LLEVQPQVANS(0.997)PS(0.003)SAAQK;LLEVQPQVANS(1)PSSAAQK 200.67 6.993e-13 619260000.0 684900.0 999710.0 676520.0 520220.0 582430.0 887390.0 601810.0 860660.0 950850.0 920900.0 True False 646907.2316856994 951682.4310046984 720129.5616702712 569661.5523901543 628263.9274266139 881851.4698493934 662646.8278995986 857674.5713395543 778199.6089778974 912741.5424493577 0.7087518225035674 1.042663653120074 0.788974236603487 0.6241214252848158 0.6883262108796503 0.9661568240697468 0.7259961304285268 0.9396686043652289 0.8525958037250998 1.0 19.799846870008338 -7.278280065034364 24.18583364563966 0.9220991762681966 0.7978928165066058 0.2048683070970071 0.1244305501389174 1060.2541708350727 1522678.2089979572 0.06995789699294727 0.03377088978975446 5.268899744220426e-08 7.278280065034364 -0.12420635976159078 LLFGS(ph)GSK ddPTM_KYSE-520_SHP099_60min_R1 2 LLFGSGSK 8 0 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 LLFGS(0.994)GS(0.006)K;LLFGS(0.5)GS(0.5)K 147.73 0.00046769 820670000.0 2158800.0 1955230.0 1883090.0 1775310.0 1902980.0 1757040.0 1639920.0 1797570.0 2252000.0 1807610.0 True False 2039047.0605388912 1861297.8159399389 2004476.9944505286 1944034.9286335849 2052733.6995249146 1746073.661619103 1805699.1176768558 1791334.6492259898 1843093.568300178 1791595.9816993012 1.1381176790790113 1.0389048842220145 1.1188219972168687 1.0850855597419333 1.1457570347852244 0.9745911910133774 1.0078718283148738 0.9998541342601899 1.0287439730424224 1.0 20.772813904869654 -6.267312916695019 24.984234720843997 1.0025568319130758 1.1012707730967164 0.7401229796012513 0.030506018015895354 250.9313257021582 1067381.204025195 0.010188976474341528 0.009217539777008406 5.403648404227949e-07 6.267312916695019 0.09871394118364063 LLFIS(ph)EPIPHPS(ph)NELR ddPTM_KYSE-520_SHP099_60min_R1 4 LLFISEPIPHPSNELR 16 0 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 2 LLFIS(1)EPIPHPS(1)NELR;LLFIS(1)EPIPHPS(1)NELR;LLFIS(1)EPIPHPS(1)NELR;LLFIS(1)EPIPHPS(1)NELR 114.72 0.00012716 94855000.0 100486.0 125583.0 128025.0 135248.0 125582.0 121778.0 117221.0 142192.0 169252.0 129830.0 True False 94911.84126612531 119549.80417607383 136277.69634724242 148101.92925620612 135464.5889361621 121017.93833074442 129070.84264671373 141698.7691398623 138520.10329571116 128679.80720621158 0.7375814692823364 0.9290486733827106 1.0590449217013131 1.1509337204622188 1.052726079384606 0.9404578772550624 1.0030388251971463 1.1011733092884388 1.0764711752616347 1.0 16.97342615403209 -4.392760722987334 2.40865624380056 1.049735351872288 0.7090030984343494 0.7475104217981859 0.05557577849523461 0.21975164267449054 1.894357259315825 0.016256047294953065 0.1371301195915728 4.0479885650018245e-05 4.392760722987334 -0.34073225343793867 LLGHS(ph)PVLR ddPTM_KYSE-520_SHP099_60min_R1 4 LLGHSPVLR 9 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 LLGHS(1)PVLR;LLGHS(1)PVLR;LLGHS(1)PVLR;LLGHS(1)PVLR 156.01 0.00012668 1990240000.0 1270780.0 1096020.0 1097280.0 997125.0 1054010.0 991140.0 976020.0 987130.0 1264180.0 1033820.0 True False 1200287.3001628758 1043365.5540404398 1168012.4245100738 1091891.4602034371 1136954.590503451 984953.9276152834 1074685.6266372546 983705.8764278746 1034636.7793844214 1024661.159099788 1.1713992372047979 1.0182542246034625 1.139901141111103 1.0656122275218414 1.1095907953633353 0.9612484272172576 1.0488204974817386 0.9600304136560669 1.0097355308103972 1.0 19.966715479148185 -6.253466102668181 24.98210540454309 0.9967722195038132 1.0965578076875957 0.5756550377595211 0.04498690347190326 439.7962623156648 1377983.4700793019 0.013801888473909459 0.013569039585117047 5.578711431164315e-07 6.253466102668181 0.09978558818378247 LLGHWEEAAHDLALACK ddPTM_KYSE-520_SHP099_60min_R1 1 LLGHWEEAAHDLALACK 17 0 P50502;Q8IZP2;H7C3I1 P50502 ST13;ST13P4 Hsc70-interacting protein;Putative protein FAM10A4 0 107.5 0.00036847 868690000.0 1073100.0 992150.0 669790.0 687830.0 1174100.0 936740.0 660330.0 818130.0 782910.0 649510.0 False True 1013573.0038281837 944485.6247524889 712965.7351018906 753201.1563963692 1266494.9902848192 930893.4581939394 727082.6005997614 815292.0979829772 640753.2795550136 643755.8467111334 1.5744680363004067 1.467148810496628 1.1075095298075222 1.17001058746787 1.9673529906643656 1.4460349571188449 1.1294384420962291 1.26646165956892 0.9953358603708852 1.0 19.296154104506016 -6.763864807536277 7.3983231467435635 1.1189713106523436 1.450905819406068 0.36523808340351327 0.23027978421316514 0.17076394750363527 57.67510746763123 0.09975052445398151 0.07151776512655446 1.7224046625951836e-07 6.763864807536277 0.33193450875372443 LLGLELALS(ph)SDAESAAGGPAGVR ddPTM_KYSE-520_SHP099_60min_R1 3 LLGLELALSSDAESAAGGPAGVR 23 0 O94964-2 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 LLGLELALS(0.655)S(0.345)DAESAAGGPAGVR;LLGLELALS(0.583)S(0.415)DAES(0.002)AAGGPAGVR;LLGLELALS(0.589)S(0.392)DAES(0.019)AAGGPAGVR 166.57 2.03e-10 187496000.0 284822.0 329068.0 264056.0 245468.0 232454.0 288121.0 215934.0 298862.0 358110.0 289676.0 True False 269022.3558814194 313259.0793388622 281077.4722645382 268797.2049173548 250746.80731766194 286322.7299659417 237762.71603275443 297825.31747691525 293086.251218462 287109.69600451784 0.9370019878297184 1.0910780224361802 0.9789898292397458 0.9362177894302989 0.8733484476738684 0.9972590057057363 0.8281249966180629 1.0373223949644277 1.0208162778795535 1.0 18.13124252717428 -10.583611053771907 13.206298036918595 1.0000001078864 0.9659651982765028 0.018012951282288525 0.07362350996455837 2.3844712377400104e-07 7.545304491891271e-09 0.0726856277345843 0.017628798200901498 2.608488619118447e-11 10.583611053771907 -0.03403490960989719 LLGLELALSS(ph)DAESAAGGPAGVR ddPTM_KYSE-520_SHP099_60min_R1 3 LLGLELALSSDAESAAGGPAGVR 23 0 O94964-2 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 LLGLELALS(0.433)S(0.567)DAESAAGGPAGVR;LLGLELALS(0.233)S(0.767)DAESAAGGPAGVR;LLGLELALS(0.028)S(0.972)DAESAAGGPAGVR 228.38 1.6637e-21 408901000.0 604660.0 702690.0 561670.0 529840.0 507490.0 604020.0 486660.0 677550.0 780590.0 649570.0 True False 571118.3044401737 668931.7176408074 597876.1469037742 580195.8342977955 547426.5757768871 600250.0871301569 535856.342143897 675199.7371913581 638854.5330725736 643815.3151578122 0.8870840612112202 1.0390118126917167 0.9286454249029827 0.9011836479155172 0.8502851095468298 0.9323327249259726 0.8323137544693974 1.04874755429801 0.9922947125232294 1.0 19.296287370667475 -7.279480891727571 24.97097020651064 1.015390854781767 0.9140010856925721 0.43016345206262785 0.05448167870273116 861.4080532262905 1192254.4299361196 0.03077745856392066 0.014831849886141956 5.254351329188695e-08 7.279480891727571 -0.10138976908919484 LLGLNELDDLLGKES(ph)PSKDSEPSCWGK ddPTM_KYSE-520_SHP099_60min_R1 2 LLGLNELDDLLGKESPSKDSEPSCWGK 27 2 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 LLGLNELDDLLGKES(0.963)PS(0.037)KDSEPSCWGK;LLGLNELDDLLGKES(0.945)PS(0.05)KDS(0.004)EPS(0.001)CWGK 148.75 7.2218e-07 2312300000.0 272590.0 330370.0 272390.0 262760.0 293680.0 309290.0 277590.0 308110.0 427660.0 268260.0 True False 257468.88930530692 314498.5293045206 289948.6952394097 287732.6313983252 316790.94518937543 307359.6063847001 305651.50621732697 307041.2383234149 350007.7244312848 265883.42510312196 0.9683525372273526 1.182843681145387 1.0905106067704449 1.0821758869953217 1.1914655645289254 1.1559938580808178 1.1495696134453703 1.154796460908874 1.3163954251587346 1.0 18.020434318323424 -4.254915472829868 24.45896271483745 1.1498676661261913 0.9683524245942011 0.3191776801446673 0.07821570652839706 658.5196423634292 2468785.8561134716 0.018706902128535683 0.17321416237837822 5.560124640028066e-05 4.254915472829868 -0.18151524153199017 LLGLTPPEGGAGDRS(ph)EEEAS(ph)S(ph)TEKPTK ddPTM_KYSE-520_SHP099_60min_R1 10 LLGLTPPEGGAGDRSEEEASSTEKPTK 27 2 V9GYY5;Q9UGY1 V9GYY5 NOL12 Nucleolar protein 12 3 LLGLT(0.005)PPEGGAGDRS(0.995)EEEAS(0.965)S(0.835)T(0.199)EKPTK;LLGLTPPEGGAGDRS(1)EEEAS(0.679)S(0.679)T(0.639)EKPT(0.004)K;LLGLTPPEGGAGDRS(0.998)EEEAS(0.907)S(0.577)T(0.514)EKPT(0.003)K;LLGLTPPEGGAGDRS(1)EEEAS(0.995)S(0.841)T(0.164)EKPTK;LLGLTPPEGGAGDRS(0.838)EEEAS(0.73)S(0.73)T(0.699)EKPT(0.001)K;LLGLTPPEGGAGDRS(1)EEEAS(0.999)S(0.843)T(0.157)EKPT(0.001)K;LLGLTPPEGGAGDRS(0.927)EEEAS(0.849)S(0.887)T(0.335)EKPT(0.002)K;LLGLT(0.002)PPEGGAGDRS(0.987)EEEAS(0.893)S(0.909)T(0.205)EKPT(0.005)K;LLGLTPPEGGAGDRS(0.995)EEEAS(0.678)S(0.678)T(0.645)EKPT(0.004)K;LLGLT(0.001)PPEGGAGDRS(0.877)EEEAS(0.802)S(0.836)T(0.431)EKPT(0.052)K 114.0 0.00056181 3539843000.0 4760852.0 4145429.0 4135961.0 4042962.0 4248530.0 4127288.0 4016449.0 4221716.0 5190889.0 4140664.0 True False 4496758.049036834 3946276.3684242135 4402571.663831576 4427203.892919156 4582865.140170989 4101528.0646522534 4422470.86168477 4207071.8525519185 4248354.409262939 4103980.9383478495 1.0957063681799424 0.9615727820638651 1.0727563626559948 1.0787583956716493 1.1166877256539902 0.9994023184482471 1.0776051175971437 1.0251197351432073 1.0351788843768877 1.0 21.968592599437052 -7.932621200471598 0.9785309502119396 1.001037188353443 1.0559444084786513 0.14047821038849573 0.04370484628443744 1.1697524813349953 2.5230410226407622 0.04140523151290875 0.01413032539138639 1.1678277735461785e-08 7.932621200471598 0.05490722012520832 LLGLTPPEGGAGDRS(ph)EEEAS(ph)STEKPTK ddPTM_KYSE-520_SHP099_60min_R1 1 LLGLTPPEGGAGDRSEEEASSTEKPTK 27 2 V9GYY5;Q9UGY1 V9GYY5 NOL12 Nucleolar protein 12 2 LLGLT(0.003)PPEGGAGDRS(0.997)EEEAS(0.893)S(0.081)T(0.024)EKPT(0.002)K 64.885 0.018761 715870000.0 109370.0 79733.0 163160.0 132730.0 143200.0 128770.0 117560.0 107920.0 177260.0 122040.0 True False 103303.02807631034 75902.50699832711 173677.55466523045 145344.61929327037 154469.0253034546 127966.29866519365 129444.11207503488 107545.65070871724 145074.05236096334 120958.82054568335 0.8540346839550669 0.6275070032586874 1.4358403453482456 1.2016041379832822 1.2770381242690376 1.0579327583378983 1.0701502502345153 0.8891096178314646 1.1993672863747231 1.0 16.884156451638283 -4.744100369338776 24.999981911841033 1.1388915522397636 0.7407707029069467 0.5237230467327068 0.15279809240893943 195.64485653338352 282083.04738880997 0.04023242603789935 0.1058946115198585 1.802601095481892e-05 4.744100369338776 -0.3981208493328169 LLGLTPPEGGAGDRS(ph)EEEASSTEKPTK ddPTM_KYSE-520_SHP099_60min_R1 9 LLGLTPPEGGAGDRSEEEASSTEKPTK 27 2 V9GYY5;Q9UGY1 V9GYY5 NOL12 Nucleolar protein 12 1 LLGLTPPEGGAGDRS(0.77)EEEAS(0.15)S(0.039)T(0.039)EKPT(0.003)K;LLGLTPPEGGAGDRS(0.999)EEEAS(0.001)STEKPTK;LLGLTPPEGGAGDRS(1)EEEASSTEKPTK;LLGLT(0.005)PPEGGAGDRS(0.989)EEEAS(0.002)S(0.002)T(0.002)EKPTK;LLGLTPPEGGAGDRS(0.995)EEEAS(0.001)S(0.001)T(0.001)EKPTK;LLGLTPPEGGAGDRS(0.975)EEEAS(0.008)S(0.008)T(0.008)EKPTK;LLGLTPPEGGAGDRS(0.999)EEEAS(0.001)STEKPTK;LLGLTPPEGGAGDRS(0.396)EEEAS(0.197)S(0.197)T(0.197)EKPT(0.012)K;LLGLTPPEGGAGDRS(1)EEEASSTEKPTK 245.12 2.9458e-31 17626830000.0 5328730.0 4933590.0 4655010.0 4537200.0 4734250.0 4941760.0 4637060.0 5046276.0 5919750.0 4893210.0 True False 5033134.724340101 4696572.930930434 4955079.3928793445 4968414.123841082 5106808.540802238 4910916.642787206 5105819.278144449 5028771.646365671 4844872.6247535385 4849859.966259771 1.0377897010130939 0.9683935131332148 1.0216953535466136 1.0244448619972712 1.052980617240507 1.01258936896162 1.0527766396690572 1.0368900713320754 0.998971652472251 1.0 22.20951166118081 -4.980364330999863 24.978051603972013 1.0283591035153596 1.0010798030013472 0.11342419492287137 0.02371305426300726 372.6028323447934 473973.1603338678 0.00584481040518606 0.012165847051819258 1.0462504769950392e-05 4.980364330999863 -0.027279300514012395 LLGLTPPEGGAGDRSEEEAS(ph)STEKPTK ddPTM_KYSE-520_SHP099_60min_R1 1 LLGLTPPEGGAGDRSEEEASSTEKPTK 27 2 V9GYY5;Q9UGY1 V9GYY5 NOL12 Nucleolar protein 12 1 LLGLTPPEGGAGDRS(0.061)EEEAS(0.312)S(0.312)T(0.312)EKPT(0.001)K 76.765 0.013191999999999999 1153200000.0 259530.0 205590.0 201020.0 228750.0 182510.0 213160.0 214520.0 238520.0 216780.0 287160.0 True False 245133.35353977152 195713.1478031187 213978.07084337223 250490.33122380494 196872.49866015025 211829.58937231277 236205.77511344448 237692.62979098648 177418.2165790909 284615.9858070994 0.8612775310024662 0.6876393370812445 0.7518132554521989 0.8800993047297654 0.6917127233801339 0.7442645527151868 0.8299104298151921 0.8351345027825824 0.6233599847737906 1.0 18.11865716931928 -10.718803701767582 4.296837870781911 1.0143185172434879 0.768712028568603 0.43367706767532077 0.07977770708394245 0.010947542621369323 0.0007164353368354039 0.07727758520649446 0.018003835053252485 1.9107166947220518e-11 10.718803701767582 -0.24560648867488488 LLGPNAS(ph)PDGLIPWTR ddPTM_KYSE-520_SHP099_60min_R1 3 LLGPNASPDGLIPWTR 16 0 J3KPM9;A0A669KBI6;A0A669KB68;A0A669KB56;A0A669KBA4;A0A669KB53;P42224-2;P42224;A0A669KB75;A0A669KB52 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta 1 LLGPNAS(1)PDGLIPWTR;LLGPNAS(1)PDGLIPWTR;LLGPNAS(1)PDGLIPWTR 165.9 5.0716e-08 2003672000.0 2151970.0 2156310.0 1906774.0 1545235.0 1856590.0 2025050.0 1715813.0 1719888.0 2317070.0 1868920.0 True False 2032595.9342541583 2052717.6309127042 2029687.7029862674 1692093.6698081573 2002693.0704479082 2012410.911795844 1889264.1227611587 1713922.1099528782 1896348.4965813917 1852362.8227977573 1.0972990330178307 1.1081617519252176 1.0957290213375603 0.9134785307623838 1.0811559408340403 1.086402127611455 1.019921205235412 0.9252626369191636 1.0237457118239932 1.0 20.82093527666113 -2.1451146294859926 0.28586310151583594 0.987399925749225 1.5430436812442474 0.2822864240615127 0.0575103590409253 37.0258072624683 0.9382183970374435 0.06722118432001292 9.089045514900759 0.007159544132957325 2.1451146294859926 0.5556437554950224 LLGPSAAADILQLSSS(ph)LPLQSR ddPTM_KYSE-520_SHP099_60min_R1 2 LLGPSAAADILQLSSSLPLQSR 22 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 LLGPSAAADILQLS(0.001)S(0.036)S(0.963)LPLQSR;LLGPSAAADILQLS(0.001)S(0.045)S(0.954)LPLQSR 185.09 4.548999999999999e-12 0.0 74990.0 81302.0 65340.0 49960.0 55993.0 74923.0 48806.0 68686.0 74001.0 54671.0 True False 70830.15521114114 77396.1298832101 69551.92094769636 54708.183378978254 60399.33054341014 74455.37776572425 53739.78678065802 68447.74429743293 60564.28381340212 54186.65747339437 1.307151216070464 1.4283244896810912 1.2835617510057034 1.0096246184928448 1.1146531888051259 1.374053710588844 0.9917531231197317 1.2631844717685483 1.1176973564597368 1.0 15.72565003617171 -1.0000000000051186 0.28681677345455875 1.0961048675988492 3.433227124377283 0.31168389729803614 0.12781441247234995 67.31266159628194 0.9537123149266793 0.14009299715990836 79.49593495416859 0.0999999999988214 1.0000000000051186 2.337122256778434 LLGSLDEVVLLS(ph)PVPELRDS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 LLGSLDEVVLLSPVPELRDSSK 22 1 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 2 LLGS(0.004)LDEVVLLS(0.996)PVPELRDS(0.774)S(0.226)K 51.783 0.046472 16801000.0 30715.0 28614.0 28255.0 24788.0 27698.0 26683.0 25255.0 28702.0 40794.0 26110.0 True False 29011.1777211655 27239.34048951036 30076.36250959843 27143.844067216032 29877.675019937724 26516.46149944371 27808.021865047718 28602.439461097154 33386.83793305392 25878.685713272618 1.1210452510069433 1.0525782024370693 1.1622059498242956 1.0488880450870248 1.1545282998902109 1.0246448290781627 1.0745530964420493 1.105250853076653 1.290128807272872 1.0 14.659476729372468 -7.5466400308844825 24.995413996527144 1.1626061991035959 1.0906421098851502 0.0604077768898601 0.0778695906227011 465.1478490248484 489297.41194729804 0.04787725135220293 0.01809784233478566 2.840272239749438e-08 7.5466400308844825 -0.07196408921844566 LLGWIQNK ddPTM_KYSE-520_SHP099_60min_R1 2 LLGWIQNK 8 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;O75369-5;O75369-4;Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98;Q14315;Q14315-2 O75369-2;Q60FE5;Q14315 FLNB;FLNA;FLNC Filamin-B;Filamin-A;Filamin-C 0 ; 208.57 9.023899999999999e-08 919050000.0 1054110.0 1210910.0 962980.0 734257.0 1333220.0 1379120.0 864100.0 950430.0 843910.0 773853.0 False True 995636.4169838123 1152736.065987035 1025055.2316224779 804040.5645175829 1438136.8290158631 1370512.4005214118 951451.6608033159 947133.1801620286 690677.2172398774 766997.2644685229 1.2980964380280038 1.5029207004875083 1.3364522653581714 1.0482965217284426 1.8750221097755733 1.7868543526958782 1.2404889885267159 1.2348586155888415 0.9004950203029342 1.0 19.54886190673512 -7.402221526206279 2.0235754454855552 0.9637194459021415 1.4625985531099093 0.4172993400891202 0.23228076885040636 0.36833171949327004 2.7574479026960006 0.1980763616566873 0.07117503433957045 3.9607595113451335e-08 7.402221526206279 0.49887910720776774 LLHEDLDES(ph)DDDMDEK ddPTM_KYSE-520_SHP099_60min_R1 3 LLHEDLDESDDDMDEK 16 0 O43150;O43150-2 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK;LLHEDLDES(1)DDDMDEK 241.93 3.9088000000000004e-23 3041500000.0 2158900.0 1960770.0 1543970.0 1549170.0 1646780.0 1730720.0 1583780.0 1581390.0 1769290.0 1692270.0 True False 2039141.5133395488 1866571.6660242253 1643496.7766393444 1696402.6510250578 1776372.2171035125 1719917.9345020123 1743883.9386032582 1575904.5271892003 1448031.5361713255 1677277.804366138 1.2157446476853386 1.1128577872820677 0.9798596108296086 1.011402313086798 1.0590805008445356 1.0254222228571066 1.0397108541374227 0.9395608307025515 0.8633224218444557 1.0 20.677690228881612 -1.0000000000000002 0.5209512549557297 0.9749897634056512 9.827353267119586 0.6515198743325479 0.053379836450314765 80.9157307661002 0.8117344258983334 0.030699454079987656 791.5982389680125 0.09999999999999995 1.0000000000000002 8.852363503713935 LLHEVQELTTEVEK ddPTM_KYSE-520_SHP099_60min_R1 3 LLHEVQELTTEVEK 14 0 Q13561;Q13561-3;Q13561-2;F8VW18;F8W1I6;H0YHL1;F8VX93;F8VRV7 Q13561 DCTN2 Dynactin subunit 2 0 ;; 125.28 0.00011641 291550000.0 277228.0 232633.0 143736.2 271828.3 266939.2 278132.5 194826.8 246299.6 201990.9 191055.1 False True 261849.61019968332 221456.96149074828 153001.66543805157 297662.7799038416 287945.7963637143 276396.5718994876 214521.79427033375 245445.24417435864 165314.44433621867 189362.5004526186 1.3827954825997986 1.1694868886998047 0.8079829167461533 1.5719204129242124 1.5206062217992455 1.4596161924290085 1.132863126318985 1.2961660497072534 0.8730051828692602 1.0 17.53079113593237 -7.755786180555285 24.97585617076751 0.9365025323133516 1.2895596242179654 0.3109035330034823 0.2120653710053231 160.90942909086263 710922.7028726627 0.1632817735724787 0.05787399785005751 1.7547442155255488e-08 7.755786180555285 0.3530570919046139 LLHGAGGHLES(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 4 LLHGAGGHLESPAR 14 0 H7C3A6;H7C2E6;H7C361;Q6NZ36-5;Q6NZ36;Q6NZ36-4;Q6NZ36-3;Q6NZ36-2 H7C3A6 C1orf86;FAAP20 Fanconi anemia-associated protein of 20 kDa 1 LLHGAGGHLES(1)PAR;LLHGAGGHLES(1)PAR;LLHGAGGHLES(1)PAR;LLHGAGGHLES(1)PAR 147.49 2.3932e-06 1226360000.0 1905590.0 1756580.0 1350720.0 1349090.0 1720840.0 1805700.0 1381650.0 1623240.0 1729170.0 1544260.0 True False 1799883.124000512 1672191.260119666 1437789.5724284109 1477307.107981301 1856260.3177597527 1794429.9565095925 1521320.6656045604 1617609.3593070626 1415196.3168284271 1530579.0578160987 1.1759491382096061 1.092521978254182 0.939376221754867 0.9651949047892968 1.212783036773253 1.1723863248658115 0.9939510526004788 1.0568610298478425 0.924614974706171 1.0 20.54564613452462 -7.3297316579105996 1.889286741178462 0.9735175153197597 1.0821826313019733 0.2031174917682309 0.08921218214807204 0.6892804834137616 4.499746723744219 0.07536537728527076 0.028452362885411465 4.68024235011257e-08 7.3297316579105996 0.10866511598221362 LLHHDDPEVLADTCWAISYLTDGPNER ddPTM_KYSE-520_SHP099_60min_R1 1 LLHHDDPEVLADTCWAISYLTDGPNER 27 0 P52292 P52292 KPNA2 Importin subunit alpha-1 0 171.15 3.2956e-10 130830000.0 49146.0 39284.0 28134.0 53206.0 51735.0 35175.0 34458.0 33950.0 35814.0 24799.0 False True 46419.773409877875 37396.73767351383 29947.562655991605 58262.68224303282 55806.25016811606 34955.459777496246 37941.3509176723 33832.235373989555 29311.080397470054 24579.300153330063 1.8885718112518681 1.521472842604399 1.2184058321096762 2.3703963041901033 2.2704572473580087 1.4221503280987597 1.5436302368654673 1.3764523466062104 1.1925107799905734 1.0 14.585156217973854 -7.304829175218216 1.0990779434401339 1.0570331766380463 1.801057390401105 0.4208853453829251 0.3304042902564495 0.5788291439894756 1.2332150361847896 0.3200653096385205 0.1232432822756287 4.9564510881913026e-08 7.304829175218216 0.7440242137630586 LLHIEELR ddPTM_KYSE-520_SHP099_60min_R1 3 LLHIEELR 8 0 Q9Y224 Q9Y224 C14orf166 UPF0568 protein C14orf166 0 ;; 186.13 1.2220999999999999e-05 1309500000.0 1127605.0 1009221.0 713970.0 645069.0 1054894.0 1033535.0 748823.0 728053.0 887768.0 870467.0 False True 1065054.502825162 960736.5082883963 759993.6485923908 706376.1638129337 1137908.1562741802 1027084.3246946579 824521.3366482133 725527.5540718485 726571.7100100861 862755.3395930793 1.234480337528247 1.1135677337465453 0.8808912720851356 0.8187444706469135 1.318923342521273 1.1904699716829164 0.9556838408407891 0.8409424094831397 0.8421526667719905 1.0 19.718591971965314 -6.965879787619656 7.092888436529912 0.884195825614418 1.0817982042234606 0.27302955986043587 0.14798719100462457 0.2771309500455052 43.062634894974956 0.06877048553856628 0.045703233328895726 1.0817333328207087e-07 6.965879787619656 0.19760237860904262 LLHLLLDDMPVKPY(ph)SDGEGGIEDENR ddPTM_KYSE-520_SHP099_60min_R1 2 LLHLLLDDMPVKPYSDGEGGIEDENR 26 1 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 1 LLHLLLDDMPVKPY(0.556)S(0.444)DGEGGIEDENR;LLHLLLDDMPVKPY(0.563)S(0.437)DGEGGIEDENR 116.94 3.9142e-05 60425000.0 77009.0 95148.0 72063.0 70493.0 78299.0 79681.0 71215.0 76956.0 90851.0 60725.0 True False 72737.15725636453 90576.94725994024 76708.29628487665 77192.63352550664 84460.68583963113 79183.68132283379 78414.1071914223 76689.0575976655 74354.74856733554 60187.0237433351 1.2085189253841313 1.504924843039284 1.2744989121242443 1.282546115832064 1.4033039114844752 1.315627130201837 1.3028407506211936 1.2741792637014682 1.2353950061464756 1.0 15.877164856582853 -8.481998292186043 0.6800911158283525 0.9937066599047601 1.340281360731453 0.6292455807703395 0.0753545402805427 0.9892081840940559 0.7937650501928686 0.08279794223314205 0.027623866824263734 3.2961100833293975e-09 8.481998292186043 0.34657470082669284 LLHLLLDDMPVKPYS(ph)DGEGGIEDENR ddPTM_KYSE-520_SHP099_60min_R1 13 LLHLLLDDMPVKPYSDGEGGIEDENR 26 1 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 1 LLHLLLDDMPVKPYS(1)DGEGGIEDENR;LLHLLLDDMPVKPYS(1)DGEGGIEDENR;LLHLLLDDMPVKPYS(1)DGEGGIEDENR;LLHLLLDDMPVKPYS(1)DGEGGIEDENR;LLHLLLDDMPVKPYS(1)DGEGGIEDENR;LLHLLLDDMPVKPYS(1)DGEGGIEDENR;LLHLLLDDMPVKPYS(1)DGEGGIEDENR;LLHLLLDDMPVKPYS(1)DGEGGIEDENR;LLHLLLDDMPVKPYS(1)DGEGGIEDENR;LLHLLLDDMPVKPY(0.028)S(0.972)DGEGGIEDENR;LLHLLLDDMPVKPY(0.005)S(0.995)DGEGGIEDENR;LLHLLLDDMPVKPY(0.155)S(0.845)DGEGGIEDENR;LLHLLLDDMPVKPYS(1)DGEGGIEDENR 284.44 4.929899999999999e-49 5521456000.0 3032453.0 3408772.0 2963829.6 3004120.0 2960332.0 3198525.8 2721592.0 2675264.2 3481609.0 2717067.6 True False 2864236.787044818 3245009.476448914 3154882.7983110314 3289630.6615783847 3193293.286414987 3178562.614049299 2996717.0795382652 2665984.332901558 2849436.5698206103 2692996.4949106076 1.0635872688500825 1.2049809506182183 1.1715138895551203 1.221550294549337 1.1857769931932223 1.180307000048587 1.112781648695662 0.9899694774723625 1.058091451364921 1.0 21.36078092141464 -7.0435063539360545 3.2191390138785416 1.018444850938976 1.175365075608563 0.719037811785317 0.04322935297309704 0.13106008763843588 2.7183610883297553 0.021599513638782528 0.012189283463956733 9.046772017809986e-08 7.0435063539360545 0.15692022466958688 LLHMDS(ph)DDEIPIR ddPTM_KYSE-520_SHP099_60min_R1 12 LLHMDSDDEIPIR 13 0 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR;LLHMDS(1)DDEIPIR 247.38 2.7997e-16 7476730000.0 3479080.0 3641380.0 3257590.0 3034718.0 3276310.0 3147100.0 2852973.0 2989770.0 3640400.0 3210920.0 True False 3286088.4970259606 3466442.6389771886 3467579.4637282896 3323136.6862987666 3534136.957346097 3127457.7815425303 3141379.3531732606 2979399.1856875657 2979395.127015975 3182473.7468579593 1.032557927703347 1.089228981825723 1.0895861960061144 1.0441992458161464 1.110499956467931 0.9827128298011112 0.9870872795964866 0.9361897136242245 0.9361884383044847 1.0 21.60171718229321 -6.39132435678873 4.672492620094633 0.9625814763432843 1.0731351087771488 0.7767785718956521 0.028143798414883434 0.10510440667783226 3.5377675158077797 0.0101550240125213 0.008858176975196991 4.0613988659206223e-07 6.39132435678873 0.11055363243386451 LLHMDS(ph)DDEIPIRK ddPTM_KYSE-520_SHP099_60min_R1 1 LLHMDSDDEIPIRK 14 1 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 LLHMDS(1)DDEIPIRK 179.46 4.2475000000000005e-09 156800000.0 101200.0 103190.0 88724.0 89910.0 91657.0 92422.0 94435.0 82712.0 107190.0 97501.0 True False 95586.23426280158 98232.59750865224 94443.2910034193 98455.01936757281 98869.88444300786 91845.16001579979 103981.41139678392 82425.09137712591 87726.99804000717 96637.21699463017 0.9891244515879737 1.0165089658377757 0.9772972974652946 1.0188105828114198 1.0231035983631622 0.9504118896646552 1.0759975776471487 0.8529332066930903 0.9077972314215328 1.0 16.560291287380295 -7.266321208385187 24.99997642016847 0.9102739172667231 1.0053805931251636 0.4259303933532059 0.045852403267898446 347.58390688007705 1779969.7937001942 0.02236290231114853 0.01130680816173135 5.416001695252566e-08 7.266321208385187 0.09510667585844046 LLHQFSFS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 4 LLHQFSFSPER 11 0 Q9UJX6-2;Q9UJX6 Q9UJX6-2 ANAPC2 Anaphase-promoting complex subunit 2 1 LLHQFSFS(1)PER;LLHQFSFS(1)PER;LLHQFS(0.003)FS(0.997)PER;LLHQFS(0.025)FS(0.975)PER 176.56 4.6572e-06 744620000.0 397364.0 462969.0 392075.0 410739.0 377508.0 372596.0 351595.0 334121.0 445784.0 361953.0 True False 375321.4267945043 440727.2743093632 417348.7818421802 449775.5110668169 407215.7318732994 370270.4901565317 387137.653836525 332962.01223542733 364840.8629001452 358746.37801517255 1.0462026930307593 1.2285204849948992 1.1633532975335827 1.253742305511986 1.1351075769079317 1.0321232849934774 1.0791402438079853 0.9281264777573456 1.0169882826934489 1.0 18.452604740522204 -6.377086145871741 1.7182771312585328 0.9953112877702901 1.177989175333138 0.6156907751428133 0.06149679820888448 0.23421035308261198 1.3727415502979878 0.026916192676231722 0.022534052056163913 4.1967572961183755e-07 6.377086145871741 0.18267788756284786 LLHS(ph)PMTK ddPTM_KYSE-520_SHP099_60min_R1 4 LLHSPMTK 8 0 A0A6I8PS19;A0A6I8PL80;Q9NVN8 A0A6I8PS19 GNL3L Guanine nucleotide-binding protein-like 3-like protein 1 LLHS(1)PMTK;LLHS(1)PMTK;LLHS(1)PMTK;LLHS(1)PMTK 137.98 0.00044441 2897650000.0 2526920.0 2347480.0 2072960.0 2182920.0 2135040.0 2123530.0 2004310.0 2092590.0 2415120.0 2187650.0 True False 2386746.7103098673 2234703.537160683 2206586.318453269 2390384.060481173 2303055.501284129 2110276.261586541 2206925.2149805464 2085331.2937041773 1976595.0882207481 2168269.1229659477 1.1007612869776362 1.0306393765843331 1.0176717894847425 1.1024388232819535 1.0621631221376286 0.9732538453067675 1.0178280876691734 0.9617492919198514 0.9116004407778444 1.0 21.0481124027097 -6.542362814727834 1.3791640884311485 0.9596923925096319 1.061016192101531 0.5842594421786109 0.03698386991912596 0.31705370497876356 1.2270669318898333 0.02035400751579789 0.014503085220138417 2.868383299596097e-07 6.542362814727834 0.10132379959189919 LLIDPNCSGHS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 LLIDPNCSGHSPR 13 0 Q8WYQ5-3;Q8WYQ5;C9JSD5;Q8WYQ5-2 Q8WYQ5-3 DGCR8 Microprocessor complex subunit DGCR8 1 LLIDPNCS(0.001)GHS(0.999)PR;LLIDPNCS(0.011)GHS(0.989)PR;LLIDPNCSGHS(1)PR;LLIDPNCS(0.009)GHS(0.991)PR 146.81 5.437000000000001e-06 1100120000.0 1380580.0 1903710.0 1914530.0 2658560.0 1618040.0 1504520.0 1368080.0 1315700.0 1773480.0 1602940.0 True False 1303996.4752820022 1812252.9140730347 2037943.6671563073 2911228.7430747873 1745370.5426117452 1495129.7326066429 1506378.8775741216 1311136.1437866902 1451460.7377926286 1588739.1986684485 0.8207744080179463 1.1406862218745009 1.2827427364191337 1.832414499192027 1.0985884555971002 0.9410794004829355 0.9481599489939226 0.8252683290533636 0.9135928282056139 1.0 20.59945088616389 -5.998355702124766 24.999978278901978 0.9276331576470406 1.2865178168886124 0.3210858307691067 0.23509913131699592 68.13139853302452 1035838.382361652 0.07850949802534792 0.08839413575816543 1.0037933122421785e-06 5.998355702124766 0.35888465924157187 LLIPERDPLEEIAESS(ph)PQTAANSAAELLK ddPTM_KYSE-520_SHP099_60min_R1 1 LLIPERDPLEEIAESSPQTAANSAAELLK 29 1 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 LLIPERDPLEEIAES(0.144)S(0.654)PQT(0.197)AANS(0.005)AAELLK 78.645 0.0024321 3547000.0 14830.0 16289.0 13358.0 11510.0 12807.0 16795.0 12305.0 17015.0 18388.0 14361.0 True False 14007.350337127926 15506.451989712532 14219.078053555688 12603.906939392322 13814.838038137865 16690.17617521108 13548.909485227163 16955.978936330856 15049.202723758295 14233.772712688935 0.9840925958190156 1.089412645734398 0.9989676202205936 0.8854930589243116 0.9705675590718402 1.1725757121534155 0.9518846309207087 1.1912498027466158 1.0572883962340098 1.0 13.797030483613186 -6.218824636201973 24.991870185974108 1.0788832062897615 0.986637409515607 0.2310341725610957 0.08088990138862116 721.133136591528 422916.0570863842 0.026567538601094277 0.026567486021859696 6.041925470764724e-07 6.218824636201973 -0.09224579677415456 LLIVQDAS(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 3 LLIVQDASER 10 0 C9JPX5;C9JKL2;O95772-2;O95772 C9JPX5 STARD3NL MLN64 N-terminal domain homolog 1 LLIVQDAS(1)ER;LLIVQDAS(1)ER;LLIVQDAS(1)ER 143.31 0.00021662 273510000.0 432920.0 437350.0 379590.0 419310.0 572040.0 665160.0 616700.0 728910.0 806070.0 511940.0 True False 408905.0645953756 416339.04952426656 404058.97876547434 459161.0963298519 617056.2935376266 661008.4897114267 679042.0544119949 726381.5813388721 659708.0073711036 507404.60988329275 0.8058757382780325 0.8205267382573209 0.7963250055185964 0.9049210184264245 1.2161030497526513 1.3027246438763418 1.3382654417904878 1.4315628340584958 1.3001616353521934 1.0 18.95277710110227 -5.75647312876742 2.5183730548179257 1.3047943106044082 0.8092766650492161 0.804163694303633 0.10523910870694712 0.10790095962054863 1.4022917894222477 0.033054623765686506 0.04196151831794959 1.7519708310711631e-06 5.75647312876742 -0.49551764555519207 LLKEGEEPT(ph)VYSDEEEPKDESAR ddPTM_KYSE-520_SHP099_60min_R1 1 LLKEGEEPTVYSDEEEPKDESAR 23 2 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 LLKEGEEPT(0.352)VY(0.296)S(0.352)DEEEPKDESAR 70.837 0.008857799999999999 4261000000.0 474670.0 634140.0 506640.0 482170.0 485050.0 522830.0 426060.0 433600.0 925390.0 436080.0 True False 448339.108868814 603674.9625364539 539298.8250526614 527995.2918303029 523220.67544302123 519566.8240360589 469130.3027448907 432095.94280300074 757362.5031835273 432216.6704651066 1.0373017505001787 1.3966952313219239 1.2477510977823323 1.2215986284428348 1.210551816245277 1.202098066872236 1.085405387626677 0.9997206779137511 1.7522750854763018 1.0 18.7213951920149 -5.597371333503427 2.824319146485031 1.2015639746876696 1.2431105399667046 0.0 0.2154536022290152 2.526220313324167 40.7807983897455 0.06543780122069444 0.09068090605057806 2.527136302679594e-06 5.597371333503427 0.041546565279035 LLKEGEEPTVYS(ph)DEEEPKDESAR ddPTM_KYSE-520_SHP099_60min_R1 12 LLKEGEEPTVYSDEEEPKDESAR 23 2 O00264-2;O00264 O00264-2 PGRMC1 Membrane-associated progesterone receptor component 1 1 LLKEGEEPT(0.005)VY(0.45)S(0.545)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPT(0.004)VYS(0.996)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPT(0.001)VYS(0.999)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPT(0.002)VY(0.001)S(0.997)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR;LLKEGEEPT(0.036)VYS(0.964)DEEEPKDESAR;LLKEGEEPT(0.001)VYS(0.999)DEEEPKDESAR;LLKEGEEPTVYS(1)DEEEPKDESAR 257.5 1.7667000000000002e-37 51684840000.0 14132763.0 20088550.0 17206399.0 17024555.0 15390571.0 15175656.0 13311341.0 14535482.0 28679540.0 11854359.0 True False 13348790.463425426 19123465.9044717 18315551.01075179 18642563.588580888 16601721.377329703 15080939.10178023 14656981.254448866 14485061.805548988 23472058.488369327 11749338.601811752 1.1361312254093212 1.627620630621953 1.5588580456713987 1.5866904700240914 1.4129919938446334 1.2835564292491106 1.2474728792128567 1.23284061311463 1.9977344498991567 1.0 23.486076210555623 -5.992055967835402 22.54186242193711 1.3589819335401832 1.4946289602432423 0.04367839829853315 0.2701325271584095 194.2827481649987 551276.3574547697 0.08209655256887738 0.09283955752595614 1.018460129923222e-06 5.992055967835402 0.13564702670305917 LLKPGEEPS(ph)EYTDEEDTKDHNK ddPTM_KYSE-520_SHP099_60min_R1 1 LLKPGEEPSEYTDEEDTKDHNK 22 2 U3KPU8;U3KQM0;O15173;O15173-2 U3KPU8 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPS(0.55)EY(0.004)T(0.445)DEEDTKDHNK 102.69 0.00068653 621170000.0 270950.0 337410.0 268360.0 434460.0 323390.0 336300.0 370660.0 401470.0 450530.0 230960.0 True False 255919.86337456582 321200.3171372647 285658.9149911812 475750.9477748384 348838.95316259924 334201.0269558493 408129.93009299424 400077.3942738027 368725.10893706884 228913.87408416095 1.1179744539226837 1.403149190595474 1.2478881681333032 2.0782966942402408 1.5238873334271885 1.4599422088019847 1.7828973089806863 1.747720167134618 1.6107591137158677 1.0 17.804445379295608 -5.128146414404031 20.2085486809277 1.63278287167642 1.2708575095487646 0.2510443281662813 0.26801199014974664 4.755660775717543 737.0189899557922 0.0685906304664147 0.11880320465520035 7.444809435236086e-06 5.128146414404031 -0.36192536212765525 LLKPGEEPSEYT(ph)DEEDTKDHNK ddPTM_KYSE-520_SHP099_60min_R1 9 LLKPGEEPSEYTDEEDTKDHNK 22 2 U3KPU8;U3KQM0;O15173;O15173-2 U3KPU8 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPSEYT(1)DEEDTKDHNK;LLKPGEEPS(0.003)EYT(0.997)DEEDTKDHNK;LLKPGEEPS(0.042)EYT(0.958)DEEDTKDHNK;LLKPGEEPS(0.008)EY(0.199)T(0.793)DEEDTKDHNK;LLKPGEEPS(0.002)EY(0.035)T(0.963)DEEDTKDHNK;LLKPGEEPSEYT(1)DEEDTKDHNK;LLKPGEEPSEYT(0.993)DEEDT(0.007)KDHNK;LLKPGEEPS(0.001)EYT(0.999)DEEDTKDHNK;LLKPGEEPSEYT(1)DEEDTKDHNK 298.53 1.3509999999999998e-44 14895890000.0 6940560.0 7136790.0 5335020.0 9017990.0 7184950.0 7868330.0 8671110.0 9663880.0 9704800.0 6228760.0 True False 6555553.301136651 6793927.895859809 5678923.925533808 9875057.058242446 7750364.688226646 7819220.833861176 9547670.42067843 9630358.25584655 7942652.958099279 6173578.032301948 1.0618725910381464 1.1004846557882657 0.9198756208830654 1.5995678691632773 1.2554088808264012 1.266562242017311 1.546537578487265 1.5599314053305435 1.2865558540834858 1.0 22.557675446590487 -5.2508340943374225 24.91474209128449 1.3821721531819526 1.0347183164903513 0.4240870227531146 0.17571548965748793 617.0072699990716 1449517.7722664147 0.04647182387132085 0.07941426968842492 5.612623439818158e-06 5.2508340943374225 -0.34745383669160135 LLKPGEEPSEYT(ph)DEEDTKDHNKQD ddPTM_KYSE-520_SHP099_60min_R1 14 LLKPGEEPSEYTDEEDTKDHNKQD 24 3 U3KPU8;U3KQM0;O15173;O15173-2 U3KPU8 PGRMC2 Membrane-associated progesterone receptor component 2 1 LLKPGEEPS(0.019)EY(0.452)T(0.529)DEEDTKDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPS(0.001)EYT(0.999)DEEDTKDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPS(0.004)EYT(0.995)DEEDT(0.002)KDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPSEYT(0.999)DEEDTKDHNKQD;LLKPGEEPSEYT(0.999)DEEDTKDHNKQD;LLKPGEEPSEYT(1)DEEDTKDHNKQD;LLKPGEEPS(0.036)EY(0.245)T(0.718)DEEDT(0.001)KDHNKQD;LLKPGEEPS(0.002)EY(0.033)T(0.965)DEEDTKDHNKQD 248.4 8.7917e-29 70586660000.0 15529460.0 17171870.0 13891924.0 20309810.0 16335930.0 16021760.0 17859130.0 19062690.0 24935510.0 12661970.0 True False 14668009.896589004 16346907.58969763 14787419.648904273 22240048.236032944 17621474.752272777 15921762.252869902 19664505.148712326 18996565.977655303 20407849.957053643 12549794.796663595 1.168784839453195 1.3025637354678905 1.1782997163296691 1.7721443733841398 1.4041245325347873 1.2686870590985884 1.5669184610046532 1.5136953460550289 1.6261500915121845 1.0 23.581160438885103 LLLAADPGGS(ph)PAQR ddPTM_KYSE-520_SHP099_60min_R1 5 LLLAADPGGSPAQR 14 0 Q5SQI0-7;Q5SQI0-6;Q5SQI0-5;Q5SQI0-4;Q5SQI0-3;Q5SQI0-2;Q5SQI0 Q5SQI0-7 ATAT1 Alpha-tubulin N-acetyltransferase 1 1 LLLAADPGGS(1)PAQR;LLLAADPGGS(1)PAQR;LLLAADPGGS(1)PAQR;LLLAADPGGS(1)PAQR;LLLAADPGGS(1)PAQR 160.78 4.1831e-08 1468210000.0 836608.0 1120927.0 944055.0 880550.0 851772.0 947059.0 744246.0 944030.0 1120610.0 893674.0 True False 790199.6865032997 1067075.9843742708 1004910.2958414066 964237.2072529898 918801.6104802655 941148.0534873012 819481.6488209974 940755.3802682585 917135.472279246 885756.7436278505 0.8921181714821931 1.204705458977122 1.1345217556295775 1.0886027277689152 1.0373069322815098 1.0625355779201646 0.9251768668049808 1.062092258440107 1.035425898676058 1.0 19.756551018648786 -6.02608318854422 1.9539475469414722 1.0137647448357818 1.0924044307050071 0.10930441067702512 0.08223314722075374 0.657170639749644 5.034196488378792 0.030293731380223586 0.03267354941069688 9.417091960716489e-07 6.02608318854422 0.07863968586922532 LLLAEDS(ph)EEEVDFLSER ddPTM_KYSE-520_SHP099_60min_R1 11 LLLAEDSEEEVDFLSER 17 0 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER;LLLAEDS(1)EEEVDFLSER 222.64 2.8931999999999998e-18 2486840000.0 1465534.0 1512946.0 1267801.0 1142758.0 1210557.0 1361118.0 1206196.0 1415632.0 1634640.0 1488794.0 True False 1384237.9075504015 1440261.803181754 1349525.481013323 1251365.3767372777 1305820.948772863 1352622.7576809125 1328130.063018534 1410721.5030029938 1337830.5819210506 1475604.4434242053 0.9380819593753841 0.9760487030247502 0.9145577509116802 0.8480357878520812 0.884939696808345 0.9166567393508871 0.9000583245307595 0.9560295845473006 0.9066322535709879 1.0 20.49287460780162 -8.930706601802445 0.7630330139934783 1.0020716512463592 0.9126676661463956 0.3528533575921279 0.03415222935574666 5.712232681629225 3.689924990710266 0.07408892494426728 0.013230830523997393 1.1729875381860458e-09 8.930706601802445 -0.08940398509996361 LLLAS(ph)PPNER ddPTM_KYSE-520_SHP099_60min_R1 11 LLLASPPNER 10 0 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER;LLLAS(1)PPNER 179.67 1.5654e-05 33780210000.0 9640040.0 10037970.0 8674740.0 6949150.0 7618360.0 9494130.0 7830780.0 8922120.0 10799720.0 9318650.0 True False 9105287.764256688 9555730.853899844 9233927.62047475 7609595.126661865 8217881.5894610705 9434873.613001294 8622391.663447952 8891171.24815847 8838763.086786315 9236094.010799995 0.9858374929499037 1.0346073613722522 0.999765443019234 0.8238975391289626 0.8897572480154161 1.0215220418900957 0.9335539085424612 0.9626549099393966 0.9569806323377533 1.0 23.138851427172526 -5.028182173689757 24.91662128316791 0.9383173033328844 1.011963475689285 0.2416575799262971 0.05323193252857637 891.965908954679 788611.3130006888 0.015052232057383383 0.026146902567500005 9.371688098678704e-06 5.028182173689757 0.07364617235640059 LLLDGPPPHS(ph)PETPQFPPTTGAVLYTVK ddPTM_KYSE-520_SHP099_60min_R1 2 LLLDGPPPHSPETPQFPPTTGAVLYTVK 28 0 Q3T8J9-3;Q3T8J9 Q3T8J9-3 GON4L GON-4-like protein 1 LLLDGPPPHS(0.988)PET(0.012)PQFPPTTGAVLYTVK;LLLDGPPPHS(0.946)PET(0.054)PQFPPTTGAVLYTVK 197.59 9.4493e-16 656620000.0 258550.0 325369.0 256295.0 208246.0 220284.0 310667.0 200826.0 260846.0 312494.0 255216.0 True False 244207.71609335297 309737.78485117457 272816.1857864993 228037.63722855732 237619.09755549024 308728.0120169275 221127.45195288342 259941.18610791405 255752.9669326803 252954.98479504357 0.9654196626772228 1.2244778852732994 1.0785167408641827 0.9014949336275168 0.939373057811139 1.2204859780370565 0.8741770878010238 1.0276183579403704 1.0110611860047107 1.0 17.94852114397626 -5.017071341210759 24.43600078408353 0.9986268368189427 1.1090858990137051 0.13759763994255814 0.10611651162474789 913.6988852159596 1307879.097783919 0.027904644445785127 0.04994782899619112 9.614543280694395e-06 5.017071341210759 0.11045906219476243 LLLDIPLQT(ph)PHK ddPTM_KYSE-520_SHP099_60min_R1 2 LLLDIPLQTPHK 12 0 P49792;J3KNE0;A6NKT7;A0A1W2PNU4;A0A286YES2;F8VYC4;P0DJD0;P0DJD1;J3KQ37;Q99666;O14715 P49792;Q99666 RANBP2;RGPD3;RGPD1;RGPD2;RGPD8;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 LLLDIPLQT(1)PHK;LLLDIPLQT(1)PHK 184.99 1.451e-07 297280000.0 457530.0 475390.0 389700.0 362910.0 331160.0 453170.0 347070.0 451590.0 495460.0 629260.0 True False 432149.89883655705 452551.5508250622 414820.685542046 397400.85728713026 357220.40795734606 450341.59793512354 382155.222676781 450023.5396918978 405496.95353019855 623685.2459568714 0.6928974216370043 0.7256088768474037 0.665112231259566 0.6371817513134037 0.5727575091331377 0.7220654983495717 0.6127373144613517 0.7215555323927247 0.6501628123462763 1.0 19.25045860502874 -10.25202027093774 0.7494817498477963 1.0921564184320054 0.6649157462118236 0.8115911512500116 0.048161250307606304 35.24733968929374 8.214203086429954 6.907369014700585 0.016947714361171744 5.597314751058587e-11 10.25202027093774 -0.4272406722201818 LLLEAQAATGFLLDPVKGER ddPTM_KYSE-520_SHP099_60min_R1 2 LLLEAQAATGFLLDPVKGER 20 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 183.22 2.5911e-12 35024000.0 51597.0 40885.0 42374.0 43789.0 55458.0 41150.0 35276.0 46118.0 53564.0 34804.0 False True 48734.811553930514 38920.82323036388 45105.49584079717 47950.69339435711 59822.229087143714 40893.16758618251 38842.04234058298 45958.02742202214 43838.127838557186 34495.66363710228 1.41278080823797 1.1282816193888805 1.3075700272159234 1.3900498885541974 1.734195628658702 1.185458207628141 1.1259978282837235 1.3322841939063712 1.2708301049006776 1.0 15.074127395282353 -8.724058522966834 0.5121549598235573 0.9795768688083454 1.348955219051605 0.27374426415584086 0.1645711354436138 4.063074633832589 1.63643480693939 0.3761854259539987 0.08944339359923914 1.887736951641352e-09 8.724058522966834 0.3693783502432596 LLLERPS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 11 LLLERPSPIR 10 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR;LLLERPS(1)PIR 134.61 0.00019177 31672970000.0 9321890.0 8318350.0 7532920.0 7200230.0 7615190.0 8183420.0 7499580.0 7893960.0 8572400.0 8071750.0 True False 8804786.178972984 7918723.979902098 8018504.07629815 7884537.69437192 8214462.128495909 8132344.24029449 8257710.735247463 7866577.695224117 7015868.25261832 8000240.574726482 1.1005651763508384 0.9898107320569955 1.002282869046384 0.9855375748674261 1.0267768889908353 1.0165124616358834 1.032182802269016 0.9832926424831999 0.8769571598611813 1.0 22.93161195316747 -7.528561226323955 24.657542003970782 0.935693982556811 1.0177643421852154 0.3972057686700705 0.040977538257436025 124.95396421936574 542179.9627585111 0.025851722521341294 0.009833895052136402 2.961002497327406e-08 7.528561226323955 0.08207035962840437 LLLERPS(ph)PIRDR ddPTM_KYSE-520_SHP099_60min_R1 12 LLLERPSPIRDR 12 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR;LLLERPS(1)PIRDR 188.71 5.6935e-08 63708320000.0 13466150.0 12577640.0 13079800.0 11249540.0 12404920.0 12028790.0 11199170.0 11505710.0 15112120.0 11799050.0 True False 12719155.815395506 11973391.294977454 13922944.836419951 12318692.89930246 13381116.629660122 11953713.859756913 12331291.3969664 11465799.377462907 12368139.953543736 11694519.596522002 1.0876167858300254 1.02384635778783 1.190552952731867 1.0533731460816989 1.1442211472833583 1.022163737560626 1.0544504453721875 0.9804421022025465 1.0576013705789225 1.0 23.47932926211815 -6.2867400684873616 23.71087967443533 1.023679072201767 1.0981446438272686 0.3933291873385534 0.04777858254997184 428.9624649504609 402005.8761132581 0.016142537297435637 0.01424422007792583 5.16725544432674e-07 6.2867400684873616 0.0744655716255016 LLLINNAGS(ph)LGDVSK ddPTM_KYSE-520_SHP099_60min_R1 2 LLLINNAGSLGDVSK 15 0 P35270 P35270 SPR Sepiapterin reductase 1 LLLINNAGS(1)LGDVSK;LLLINNAGS(1)LGDVSK 217.35 3.3385e-14 572600000.0 719640.0 710410.0 597640.0 505920.0 573370.0 619690.0 537120.0 607490.0 808710.0 608260.0 True False 679720.1346332266 676280.8372528504 636164.830657809 554002.4846896051 618490.9569709619 615822.2848476656 591417.3313860387 605382.7589792324 661868.6499200874 602871.2896191195 1.1274713961957923 1.1217665344125267 1.0552249569882879 0.9189399034736111 1.0259087928398622 1.0214821894018675 0.9810009890497238 1.0041658466796446 1.0978606235142514 1.0 19.201490500361874 -4.90515772098687 3.945097761458486 1.0062534995158303 1.1241320024152335 0.5518317932085213 0.04194938031121952 0.15760901271768105 4.596077221283494 0.011260789767061847 0.02553687202351185 1.2440627284456198e-05 4.90515772098687 0.11787850289940316 LLLLEGGPGS(ph)PS(ph)CLLGGK ddPTM_KYSE-520_SHP099_60min_R1 1 LLLLEGGPGSPSCLLGGK 18 0 F8VWT9;J3KPF0;Q9Y4D8-5 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 2 LLLLEGGPGS(1)PS(1)CLLGGK 65.574 0.034174 14860000.0 127050.0 158930.0 124600.0 114360.0 137350.0 170690.0 120770.0 158390.0 203450.0 153970.0 True False 120002.2832321041 151294.76424120637 132631.91536704876 125228.74001641228 148158.66358540126 169624.66039575948 132978.6102016158 157840.5820585039 166508.60855713653 152605.9455868473 0.7863539180641648 0.9914080585746593 0.8691136826747592 0.8206019728447947 0.970857740933068 1.1115206536905662 0.8713855131282441 1.03430165483741 1.0911017124321496 1.0 17.219451645662748 -5.943701971203272 6.283964647136818 1.0173103597243038 0.8770314611674845 0.4655841097455483 0.07797954044153926 0.19758043606743858 16.191893661708534 0.024207039103745817 0.027417540512689322 1.1384082353050808e-06 5.943701971203272 -0.1402788985568193 LLLMS(ph)YR ddPTM_KYSE-520_SHP099_60min_R1 1 LLLMSYR 7 0 H0Y3V5;Q6YHU6-2;Q6YHU6-3;Q6YHU6 H0Y3V5 THADA Thyroid adenoma-associated protein 1 LLLMS(0.63)Y(0.37)R 57.102 0.046049 693020000.0 79451.0 64468.0 57291.0 58865.0 66025.0 55135.0 57671.0 53895.0 75107.0 71211.0 True False 75043.69464835823 61370.860511559185 60984.06952884101 64459.51190159244 71220.79186913816 54790.88201371021 63500.94749472049 53708.05082418756 61469.46209339314 70580.1259413196 1.0632411553182783 0.8695204165912511 0.8640402480939641 0.9132813386474283 1.0090771434490102 0.7762933443794563 0.8997001159719559 0.7609514733487511 0.8709174328266136 1.0 16.106974383976453 -6.262582881903502 24.999992149611337 0.8490149207080833 0.933573493228104 0.18067275348561773 0.08411465572926868 173.25100870632753 3787689.976809864 0.027901783717574086 0.025969356161001707 5.462822859819972e-07 6.262582881903502 0.08455857252002075 LLLPGELAK ddPTM_KYSE-520_SHP099_60min_R1 4 LLLPGELAK 9 0 P62807;O60814;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;P57053;Q5QNW6-2;A0A2R8Y619;Q16778;P06899;P33778;P23527;Q99880;Q96A08 P62807;Q16778;Q99880 HIST1H2BC;HIST1H2BK;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;H2BFS;HIST2H2BE;HIST1H2BJ;HIST1H2BB;HIST1H2BO;HIST1H2BL;HIST1H2BA Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-J;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-L;Histone H2B type 1-A 0 ;;; 173.23 0.00050101 9020390000.0 6798120.0 8471680.0 7218580.0 5056230.0 8563780.0 8093410.0 7284320.0 7447540.0 8059350.0 7479780.0 False True 6421014.731883757 8064687.7765490785 7683901.216936364 5536772.578989017 9237700.764757102 8042896.026091992 8020690.153712306 7421706.222008899 6595975.199680299 7413514.968380778 0.8661228525564307 1.0878359065767862 1.0364720715758724 0.7468485060870297 1.246062199126409 1.0848964439129851 1.081901120847692 1.0011049082200625 0.8897230568512574 1.0 22.82172629877825 -4.245104542363945 23.631168425783752 1.0225568065764157 0.8661225924464719 0.118662523118517 0.1250785773336619 3397.2627081470364 4914559.019935036 0.03134054059716203 0.7568435204664179 5.687160143608285e-05 4.245104542363945 -0.15643421412994374 LLLWSQR ddPTM_KYSE-520_SHP099_60min_R1 3 LLLWSQR 7 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;E9PKG0;E9PQ28;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;; 140.12 0.012606000000000001 1267229000.0 759710.0 859289.0 613878.0 489879.0 890423.0 811488.0 628253.0 584736.0 610179.0 600090.0 False True 717567.3718556609 818007.4666209164 653449.5581195288 536436.9528725083 960494.2242861576 806423.2023858096 691762.9443984088 582707.6872944077 499385.8749608499 594773.6694629558 1.2064545031113774 1.3753256215251206 1.0986524650789498 0.901917788924446 1.6148902912151863 1.3558488611541268 1.1630692142492258 0.9797133215741664 0.8396233737309937 1.0 19.18198125535767 -7.220947026972727 2.9851742886922312 0.919979795302606 1.2564195794425075 0.3882219807836069 0.17913275322673808 0.2946425036632262 5.221962206585725 0.11072705797911653 0.05329480995022116 6.012470700638278e-08 7.220947026972727 0.3364397841399015 LLMADQDS(ph)PLDLTVR ddPTM_KYSE-520_SHP099_60min_R1 1 LLMADQDSPLDLTVR 15 0 Q96JN0-3;Q96JN0-2;Q96JN0 Q96JN0-3;Q96JN0-2 LCOR Ligand-dependent corepressor 1 LLMADQDS(1)PLDLTVR 68.57600000000001 0.052110000000000004 0.0 27544.0 31043.0 26744.0 24501.0 25073.0 25803.0 25451.0 29056.0 34452.0 27688.0 True False 26016.0794123973 29551.64768350704 28467.961031912946 26829.567673505757 27046.10245414466 25641.95390586314 28023.835457823367 28955.211517721364 28196.385264244098 27442.70586093804 0.9480143665216555 1.0768489023369545 1.0373598425814947 0.9776575170633948 0.9855479481942083 0.9343813994071886 1.0211761041287297 1.055115033643101 1.027463742355627 1.0 14.744135118337711 -10.155868291226412 4.405645281488676 0.9999984338309031 1.0081994504722898 0.0017643733390240168 0.0433830651067082 7.001876016628493e-07 1.341826711267342e-07 0.044071759998317736 0.010686930540941037 6.984441895908111e-11 10.155868291226412 0.008201016641386616 LLNGNHENGDLDPT(ph)SPLENMDYIK ddPTM_KYSE-520_SHP099_60min_R1 1 LLNGNHENGDLDPTSPLENMDYIK 24 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73;F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9;F5H6X8;F5H221;F5H592 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 LLNGNHENGDLDPT(0.61)S(0.39)PLENMDYIK 204.92 8.834199999999999e-16 2259500000.0 375870.0 299900.0 255290.0 280250.0 252630.0 309310.0 271710.0 341760.0 319300.0 338060.0 True False 355019.7418217316 285492.35384092235 271746.4018784425 306884.8757397649 272510.5437319258 307379.48155728093 299177.0984340569 340574.51432738366 261323.1688979779 335065.0514067003 1.059554675521233 0.8520505276284192 0.8110258015199504 0.9158964041500991 0.8133063791280155 0.9173725527828483 0.8928925806437427 1.0164429650229203 0.7799177138912801 1.0 18.354081690099882 -6.483915865360168 24.8720580320467 0.9210335089561166 0.8832576540657023 0.026480542043663235 0.08903633212966866 1990.3454822915398 1270542.8436861772 0.03033842874153398 0.02675089898569789 3.281588602420589e-07 6.483915865360168 -0.03777585489041424 LLNGNHENGDLDPTS(ph)PLENMDYIK ddPTM_KYSE-520_SHP099_60min_R1 6 LLNGNHENGDLDPTSPLENMDYIK 24 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73;F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9;F5H6X8;F5H221;F5H592 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 LLNGNHENGDLDPT(0.142)S(0.858)PLENMDYIK;LLNGNHENGDLDPT(0.435)S(0.565)PLENMDYIK;LLNGNHENGDLDPT(0.144)S(0.856)PLENMDYIK;LLNGNHENGDLDPT(0.007)S(0.993)PLENMDYIK;LLNGNHENGDLDPT(0.213)S(0.787)PLENMDYIK;LLNGNHENGDLDPT(0.111)S(0.889)PLENMDYIK 251.47 4.171899999999999e-29 4644054000.0 1832486.0 1677729.0 1431732.0 1493018.0 1466884.0 1590775.0 1611430.0 1746758.0 1954365.0 1613405.0 True False 1730834.3486097252 1597128.3805174313 1524023.7355721947 1634913.9818277708 1582319.4253717347 1580846.3831569743 1774329.0704412528 1740698.9041943804 1599501.5815324062 1599111.4869100957 1.0823725317327018 0.9987598698346566 0.9530440798202318 1.0223889923940543 0.9894991301883475 0.9885779672632993 1.1095718372142542 1.0885413046202732 1.000243944606429 1.0 20.608839093511655 -6.730813624672073 24.994962233144964 1.0569677933535075 1.0030736138899097 0.17995559055350996 0.04450209296600865 284.68290169998033 232341.25899443615 0.01701627738372214 0.013179377455253376 1.8586018937769842e-07 6.730813624672073 -0.05389417946359787 LLNGNHENGDLDPTS(ph)PLENMDYIKDK ddPTM_KYSE-520_SHP099_60min_R1 1 LLNGNHENGDLDPTSPLENMDYIKDK 26 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73;F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9;F5H6X8;F5H221;F5H592 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 LLNGNHENGDLDPT(0.005)S(0.995)PLENMDYIKDK 142.59 1.07e-06 320770000.0 239280.0 205160.0 181340.0 165790.0 189400.0 186860.0 209380.0 182710.0 265680.0 205860.0 True False 226006.6614071456 195303.80564856186 193029.4665542589 181546.63175341883 204304.70246141273 185693.73742780223 230546.17375187826 182076.22165483446 217439.20924777602 204036.24055665673 1.1076790122703135 0.9572015496645555 0.9460548088301917 0.8897764007909517 1.0013157559854249 0.9101017393831016 1.1299275713123142 0.8923719686173868 1.0656891572524223 1.0 17.63846589833844 LLNSTNREDEDT(ph)PPNS(ph)PNVDLGK ddPTM_KYSE-520_SHP099_60min_R1 1 LLNSTNREDEDTPPNSPNVDLGK 23 1 P98174 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 2 LLNS(0.096)T(0.101)NREDEDT(0.805)PPNS(0.998)PNVDLGK 44.301 0.056633 0.0 190800.0 163810.0 178290.0 144630.0 145380.0 175080.0 173350.0 181320.0 209680.0 173420.0 True False 180215.94364962974 155940.3217161771 189782.85867408602 158375.59171540485 156820.5789009513 173987.26077737167 190873.90973296436 180691.04324040617 171607.3976026561 171883.63371871857 1.0484764590475595 0.9072435713767133 1.1041357141928876 0.9214117033072553 0.9123648104716159 1.0122386699253496 1.1104833287695248 1.0512405360018198 0.9983928887812872 1.0 17.391072656385305 -6.522467589418964 24.99998751121411 1.0467366327657694 0.9769145599372877 0.16314004128796677 0.06481741140470358 24.954500773079715 1517561.761016873 0.024189680356948656 0.01895673310620011 3.002841508918244e-07 6.522467589418964 -0.06982207282848174 LLPDPGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 LLPDPGSPR 9 0 A6ND36 A6ND36 FAM83G Protein FAM83G 1 LLPDPGS(1)PR;LLPDPGS(1)PR;LLPDPGS(1)PR 127.87 0.00062063 1247290000.0 2970750.0 3041840.0 3046420.0 2615080.0 2690750.0 2691730.0 2476200.0 2516020.0 3136400.0 2748910.0 True False 2805956.5754566942 2895705.440505074 3242797.107644338 2863616.416947528 2902496.7167267515 2674929.9146234556 2726518.4613831374 2507292.5138634797 2566908.822209891 2724556.796019621 1.029876337889521 1.062817058809524 1.190210867463592 1.0510393547791195 1.0653096756753566 0.9817853379057222 1.0007199943001306 0.9202570185090108 0.9421381216790773 1.0 21.377590134924535 -6.2961217235720905 1.4634152575445947 0.9552035426556305 1.0910045302309967 0.601030519844536 0.04553388401543072 0.2755358974289764 1.182427895869056 0.021587506628233697 0.019005720051700425 5.056829098980645e-07 6.2961217235720905 0.1358009875753663 LLPEGEETLES(ph)DDEKDEHTSK ddPTM_KYSE-520_SHP099_60min_R1 2 LLPEGEETLESDDEKDEHTSK 21 1 Q8N6N3 Q8N6N3 C1orf52 UPF0690 protein C1orf52 1 LLPEGEET(0.001)LES(0.999)DDEKDEHTSK;LLPEGEETLES(1)DDEKDEHTSK 187.79 2.8134e-13 455430000.0 324260.0 332890.0 381530.0 668230.0 287780.0 332180.0 305060.0 312580.0 380500.0 287800.0 True False 306272.65140371554 316897.4647219229 406124.0342695841 731738.3782893238 310426.64875578356 330106.74140408507 335898.44189869176 311495.7329367208 311410.7916244306 285250.315905012 1.0736978517692648 1.1109451841148856 1.4237461332201395 2.565250018979792 1.088260490688309 1.1572528512606808 1.1775567744175452 1.0920083714839721 1.0917105933307012 1.0 18.121868958687287 LLPETVS(ph)PSAPSWR ddPTM_KYSE-520_SHP099_60min_R1 2 LLPETVSPSAPSWR 14 0 B0QXZ6;O95503 B0QXZ6 CBX6 Chromobox protein homolog 6 1 LLPET(0.273)VS(0.679)PS(0.047)APSWR;LLPET(0.126)VS(0.822)PS(0.052)APSWR 91.845 0.0023563000000000004 1030120000.0 398350.0 437650.0 386500.0 427860.0 392720.0 350017.0 321503.0 365040.0 490060.0 325407.0 True False 376252.7314089626 416624.6370739571 411414.4084218652 468523.6857592002 423624.82972885977 347832.4140707861 354003.6608069068 363773.76144097606 401077.457407276 322524.1471428151 1.1665877880528313 1.2917626192170781 1.2756080810274621 1.4526778534561502 1.3134670178393708 1.0784693709050082 1.0976035870274 1.127896204558896 1.2435579194933182 1.0 18.299047652520144 -6.255526289034652 24.593178679397337 1.1167550624502114 1.3066866014073433 0.5500068606466476 0.08593201353621938 315.45280156692036 1312003.576347759 0.029559867420646924 0.02881210624766716 5.552310064485369e-07 6.255526289034652 0.18993153895713188 LLPIPDSLPIS(ph)PDDGQHADIYK ddPTM_KYSE-520_SHP099_60min_R1 1 LLPIPDSLPISPDDGQHADIYK 22 0 H7C357;H0Y6E6;Q92622-3;Q92622-2;Q92622 H7C357 KIAA0226 Run domain Beclin-1 interacting and cysteine-rich containing protein 1 LLPIPDSLPIS(1)PDDGQHADIYK 230.9 1.0580000000000002e-20 243280000.0 67410.0 81355.0 69007.0 62125.0 74297.0 80551.0 68847.0 83018.0 99606.0 88583.0 True False 63670.63292149655 77446.58368365541 73455.30163510377 68029.34132143778 80143.75120789638 80048.2513301237 75806.72664196952 82730.02993454678 81520.06126292518 87798.22353653109 0.7251927243722018 0.8820973883535517 0.836637675300349 0.7748373324789667 0.9128174577991337 0.9117297378667032 0.8634198231861474 0.9422745313306307 0.9284932881245178 1.0 16.42190412886629 -1.000000000271783 0.1103084420247738 1.061603760451897 0.1881447134832113 0.6765990280206751 0.043993810378147986 66.85422289877033 0.5156923835845959 0.4055769348471428 8.89167228798032 0.09999999993741965 1.000000000271783 -0.8734590469686858 LLPLEEHYR ddPTM_KYSE-520_SHP099_60min_R1 4 LLPLEEHYR 9 0 Q9NZN4;C9JIJ3;C9IZH1;C9JC03;Q9NZN3-2;A0A024R571;Q9H4M9;Q9NZN3 Q9NZN4;A0A024R571;Q9NZN3 EHD2;EHD1;EHD3 EH domain-containing protein 2;EH domain-containing protein 3;EH domain-containing protein 1 0 ;;; 168.8 0.00015754 1372430000.0 538369.0 424626.0 306422.0 296113.0 529723.0 451632.0 344825.0 386503.0 346240.0 359552.0 False True 508504.59835800563 404226.32958337956 326174.45241253497 324255.49049038015 571409.1863884212 448813.1971636159 379683.27616769297 385162.3113034784 283371.544000113 356366.6490072229 1.4269141059485035 1.1342989887226698 0.9152777155808539 0.9098929189746038 1.6034305903211492 1.2594141410649213 1.0654287577847878 1.0808034713025905 0.7951685287878034 1.0 18.44300280129866 -7.368834151497364 2.070580895447335 0.9099611815163227 1.1897646668561077 0.2333695443292242 0.20683198788064477 0.5701670124111934 4.5059496180200895 0.17057230230731432 0.06342193351824292 4.277261951707488e-08 7.368834151497364 0.27980348533978505 LLPNGDYLNVS(ph)PSDAVTTGT(ph)PPDFFSAALHPGGEPLR ddPTM_KYSE-520_SHP099_60min_R1 1 LLPNGDYLNVSPSDAVTTGTPPDFFSAALHPGGEPLR 37 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 2 LLPNGDYLNVS(0.911)PS(0.089)DAVT(0.011)T(0.225)GT(0.727)PPDFFS(0.037)AALHPGGEPLR 98.69200000000001 0.00047726 47582000.0 12489.0 14178.0 7805.4 13371.0 15356.0 10375.0 9421.4 11908.0 13106.0 13355.0 True False 11796.21027379573 13496.867598388137 8308.548573081567 14641.775819862258 16564.42983631179 10310.245776589161 10373.807056003181 11866.693927348095 10726.280775373954 13236.685090032777 0.8911755619749748 1.019656168186042 0.6276910356761379 1.1061512546587298 1.2514031816610038 0.7789144870079878 0.7837163901266079 0.8965004339556067 0.8103449392666177 1.0 13.692254247694736 LLPPAS(ph)P ddPTM_KYSE-520_SHP099_60min_R1 1 LLPPASP 7 0 Q9Y4R8 Q9Y4R8 TELO2 Telomere length regulation protein TEL2 homolog 1 LLPPAS(1)P 77.923 0.017906000000000002 47917000.0 24022.0 23635.0 21015.0 21509.0 23769.0 21419.0 19408.0 20503.0 27825.0 22315.0 True False 22689.45177333022 22499.539123141727 22369.66052518886 23553.208893083338 25639.485072889755 21285.316076025374 21369.95004382679 20431.879878436164 22772.681411168935 22117.306460807307 1.0258686704701938 1.0172820620364307 1.011409800955136 1.0649221203685224 1.1592498895977175 0.9623828341730377 0.966209428878473 0.923796028899008 1.0296317705559208 1.0 14.432888078311482 LLPPVGTGRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 LLPPVGTGRSPR 12 1 Q9NWZ5-3;Q9NWZ5-2;Q9NWZ5-4;Q9NWZ5 Q9NWZ5-3 UCKL1 Uridine-cytidine kinase-like 1 1 LLPPVGT(0.333)GRS(0.667)PR;LLPPVGT(0.286)GRS(0.714)PR 98.682 0.0010665 966130000.0 767590.0 788380.0 835490.0 541720.0 677940.0 680130.0 571620.0 544080.0 901110.0 640740.0 True False 725010.2525472715 750505.0414174951 889347.0222312649 593204.9059259428 731290.02104905 675885.056388587 629404.9280735913 542192.7134692265 737491.1391345345 635063.5420881772 1.1416341901210973 1.181779446745959 1.4004063582471893 0.9340874835538545 1.1515225998401148 1.0642794170897971 0.9910896884491597 0.8537613601410995 1.1612871630286965 1.0 19.27654142422583 -5.274613235595584 24.97468382480655 1.0220306744082335 1.235323953727282 0.46804220970610644 0.10692696878006555 672.9380141606613 1275738.483272489 0.030190062944571307 0.04507834817285348 5.313574381774482e-06 5.274613235595584 0.2132932793190485 LLPQLTYLDGYDR ddPTM_KYSE-520_SHP099_60min_R1 2 LLPQLTYLDGYDR 13 0 P39687;H0YN26;Q92688;Q92688-2 P39687;Q92688 ANP32A;ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member B 0 ; 110.86 0.0011962 599140000.0 142368.0 168497.0 169084.0 182426.0 186900.0 210956.0 109269.0 152272.0 188216.0 201339.0 False True 134470.56323642813 160402.15120084686 179983.4251839655 199763.71219162294 201607.96668446698 209639.3453538449 120314.97688267252 151743.80397255204 154040.7189392481 199555.29309937183 0.6738511474584957 0.8037980286545041 0.9019225818998436 1.001044417760181 1.0102862397344328 1.0505326223015872 0.6029154878029704 0.7604098173281163 0.7719199854174802 1.0 17.606429020521972 -9.498446428125204 9.780463217167432 1.0000000146066625 0.8488514758986608 0.09955857302182447 0.14127827898706835 0.0 0.0 0.15001988219493367 0.036385165896025286 3.173610116560633e-10 9.498446428125204 -0.1511485387080017 LLPQLTYLDGYDRDDK ddPTM_KYSE-520_SHP099_60min_R1 4 LLPQLTYLDGYDRDDK 16 1 P39687;H0YN26 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 0 ;;; 164.93 5.8686e-08 1653750000.0 788550.0 724818.0 500298.0 469255.0 732416.0 754242.0 598351.0 585365.0 604540.0 663164.0 False True 744807.5595645461 689996.6553060013 532548.0095851028 513852.8541133394 790052.9723230092 749534.4959061365 658838.1584230124 583334.5054402179 494770.77521322784 657288.8828937844 1.1331510070358277 1.049761639460898 0.8102191037227092 0.7817762744610062 1.2019874257491114 1.1403425729737446 1.002357069424949 0.8874857321061411 0.7527447794871361 1.0 19.32616805855861 -7.287400849712573 4.615242137818511 0.8614305633109663 1.0136828712713293 0.1671599225455096 0.13911416081842287 0.3866046579128716 21.35285068096971 0.08433973783092964 0.04074416859779816 5.1593994173452975e-08 7.287400849712573 0.15225230796036293 LLPS(ph)PLKDAVEVSTWR ddPTM_KYSE-520_SHP099_60min_R1 2 LLPSPLKDAVEVSTWR 16 1 Q9NV88-3;Q9NV88-2;Q9NV88;H0YBH8;E5RG70;G3XAN1 Q9NV88-3 INTS9 Integrator complex subunit 9 1 LLPS(1)PLKDAVEVSTWR;LLPS(1)PLKDAVEVSTWR 148.91 5.815399999999999e-06 437120000.0 491940.0 481010.0 409040.0 377680.0 399110.0 485240.0 353510.0 407910.0 530760.0 388730.0 True False 464651.1075419232 457901.5575892706 435407.3728871406 413574.5936463678 430517.68637473235 482211.4371693616 389246.24072512443 406495.05541690934 434387.36337078264 385286.15462736384 1.2059896312425722 1.1884713532780278 1.130088293227802 1.0734218935179842 1.1173972415155042 1.2515670012480484 1.0102782984807503 1.0550471397293215 1.1274408855696045 1.0 18.55557081769009 -1.00000000766868 0.07185019679236851 0.8771556391054735 1.6921035950491234 0.40145119860144995 0.061026564117669845 260.18953375175533 1.3804009562404942 2.6618061499573895 21.358304291381312 0.0999999982342212 1.00000000766868 0.81494795594365 LLPSAPQTLPDGPLAS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 5 LLPSAPQTLPDGPLASPAR 19 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5;A0A0C4DH09 O15027 SEC16A Protein transport protein Sec16A 1 LLPSAPQTLPDGPLAS(1)PAR;LLPSAPQTLPDGPLAS(1)PAR;LLPSAPQTLPDGPLAS(1)PAR;LLPSAPQTLPDGPLAS(1)PAR;LLPSAPQTLPDGPLAS(1)PAR 166.47 9.8756e-09 4601540000.0 1417674.0 1995260.0 1298807.0 1213240.0 1349545.0 2312142.0 1611161.0 2317455.0 2510707.0 2652985.0 True False 1339032.7971569458 1899404.7146536836 1382530.1773846752 1328545.9648260942 1455746.5136393197 2297711.0641324753 1774032.8772960631 2309416.289503065 2054825.898572929 2629481.616891095 0.5092383185169856 0.7223494936995983 0.52578050688914 0.5052501437134476 0.5536249062507184 0.8738266315963522 0.6746701957907386 0.87827816504515 0.781456651141149 1.0 21.32634698007594 -6.256354466784154 24.8258695790478 0.8236027091185593 0.5667838913489299 0.6720276841282323 0.09681840377634321 250.57659583433306 1223381.8264593682 0.031586498054752124 0.030667941626607388 5.541732177204739e-07 6.256354466784154 -0.25681881776962934 LLPSVWS(ph)ESEDGAGS(ph)PPPYR ddPTM_KYSE-520_SHP099_60min_R1 1 LLPSVWSESEDGAGSPPPYR 20 0 K7EPZ6;A0A0A0MS90;Q9UIS9-4;Q9UIS9-11;Q9UIS9-7;K7EN65;Q9UIS9-10;K7EMA9;Q9UIS9-8;Q9UIS9-2;Q9UIS9-6;Q9UIS9-5;Q9UIS9;Q9UIS9-9;Q9UIS9-12 K7EPZ6;Q9UIS9-6 MBD1 Methyl-CpG-binding domain protein 1 2 LLPS(0.024)VWS(0.711)ES(0.269)EDGAGS(0.995)PPPY(0.001)R 80.238 0.0064247 31552000.0 28405.0 24121.0 18831.0 19909.0 16594.0 25681.0 25609.0 23198.0 32479.0 26798.0 True False 26829.318026036348 22962.190953640875 20044.8763906653 21801.145374140873 17899.85339305534 25520.715353116728 28197.80763975478 23117.5315524539 26581.632328961587 26560.590568528514 1.0101175256933574 0.8645210991975697 0.7546848907198755 0.8208080056763843 0.6739252783883792 0.9608489422428759 1.0616408384068914 0.8703696362778065 1.0007922173409052 1.0 14.696999604578233 -6.485429754201382 24.25904096662643 0.9779476945014266 0.8223478774880801 0.41681123175262635 0.09123140778995419 410.67676957945866 266032.0959010417 0.03297264909381104 0.0290699197223342 3.270169365419487e-07 6.485429754201382 -0.15559981701334646 LLPSVWSESEDGAGS(ph)PPPYR ddPTM_KYSE-520_SHP099_60min_R1 5 LLPSVWSESEDGAGSPPPYR 20 0 K7EPZ6;A0A0A0MS90;Q9UIS9-4;Q9UIS9-11;Q9UIS9-7;K7EN65;Q9UIS9-10;K7EMA9;Q9UIS9-8;Q9UIS9-2;Q9UIS9-6;Q9UIS9-5;Q9UIS9;Q9UIS9-9;Q9UIS9-12 K7EPZ6;Q9UIS9-6 MBD1 Methyl-CpG-binding domain protein 1 1 LLPSVWSES(0.008)EDGAGS(0.992)PPPYR;LLPSVWSESEDGAGS(1)PPPYR;LLPSVWSES(0.001)EDGAGS(0.999)PPPYR;LLPSVWS(0.002)ES(0.072)EDGAGS(0.927)PPPYR;LLPSVWS(0.002)ES(0.061)EDGAGS(0.937)PPPYR 221.47 5.9431e-19 763209000.0 316491.0 294694.0 277583.0 232532.0 212522.0 256904.0 319923.0 329536.0 377565.0 382180.0 True False 298934.6133208333 280536.45789528766 295476.44432850304 254631.7713667052 229246.27231522856 255300.56684229968 352263.9389875926 328392.9165302808 309008.7136391019 378794.1825315407 0.7891742458213233 0.7406039237995121 0.7800448316122169 0.6722166894564253 0.6052000872429981 0.673982280129241 0.9299613226194702 0.8669428720778646 0.815769428067634 1.0 18.53105464870313 -6.760758331815441 24.999981716103324 0.8920803303111143 0.7082605201940676 0.661931526578337 0.0673636560110297 12.65034582037308 464397.49013404374 0.028739932252059498 0.02091414312015388 1.7347690615156444e-07 6.760758331815441 -0.18381981011704673 LLPYPTLAS(ph)PAS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 7 LLPYPTLASPASD 13 0 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 2 LLPYPTLAS(1)PAS(1)D;LLPYPTLAS(1)PAS(1)D;LLPYPTLAS(1)PAS(1)D;LLPYPTLAS(1)PAS(1)D;LLPYPTLAS(1)PAS(1)D;LLPYPTLAS(1)PAS(1)D;LLPYPTLAS(1)PAS(1)D 158.4 1.401e-06 769064000.0 656501.0 669168.0 604677.0 565468.0 617737.0 611895.0 568671.0 611798.0 761168.0 602027.0 True False 620083.5808277028 637020.1648383545 643655.4469374077 619209.9087058465 666349.387457263 608075.9363340747 626157.8143741257 609675.815532727 622959.078683797 596693.5091499186 1.039199473966303 1.0675835333719104 1.0787036176317615 1.0377352848835344 1.1167364438178318 1.019075835432452 1.0493792956893122 1.0217570765958286 1.0440185273194906 1.0 19.186630557734592 LLQAFLER ddPTM_KYSE-520_SHP099_60min_R1 1 LLQAFLER 8 0 P55060-4;P55060-3;P55060 P55060-4 CSE1L Exportin-2 0 127.02 0.0064305000000000005 61582000.0 97581.0 126330.0 66010.0 61728.0 97258.0 133770.0 73250.0 91078.0 93735.0 87709.0 False True 92167.98740709914 120260.91717480402 70265.11021973423 67594.61056080007 104911.65127767737 132935.09181053803 80654.8248511084 90762.07167576502 76715.08686705917 86931.96649656942 1.0602312488897434 1.383391196833789 0.8082770130652351 0.7775575922749606 1.2068247792578979 1.5291853752760098 0.9277924807359702 1.0440586510756862 0.8824726962789524 1.0 16.40759915987832 LLQAQGVEVPSKDS(ph)LPK ddPTM_KYSE-520_SHP099_60min_R1 1 LLQAQGVEVPSKDSLPK 17 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 LLQAQGVEVPS(0.102)KDS(0.898)LPK 198.9 8.920700000000001e-13 623390000.0 618530.0 625660.0 491010.0 360450.0 410010.0 542600.0 368340.0 425860.0 515090.0 522070.0 True False 584218.9078910135 595602.3544651944 522661.29024377785 394707.05962675606 442275.45436221635 539213.4321327498 405575.4018519771 424382.7910564711 421562.64036222885 517444.8659643142 1.1290457135027492 1.1510450555060108 1.0100811209513931 0.7628002239256485 0.8547296213635986 1.0420693441954778 0.7838040891489835 0.8201507425638249 0.8147005953505819 1.0 18.98104562528584 -4.997140543357865 3.980603878159549 0.8641745860918605 1.1350425515766738 0.6238247144014533 0.08503874860832257 0.13207774103585973 4.81846497170783 0.023448668818167345 0.04870018463083176 1.0066058653526036e-05 4.997140543357865 0.2708679654848133 LLQDFFNGK ddPTM_KYSE-520_SHP099_60min_R1 4 LLQDFFNGK 9 0 E9PKE3;P11142;E9PNE6;A8K7Q2;P11142-2;E9PN89;P54652;P17066 E9PKE3;P17066 HSPA8;HSPA2;HSPA6 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 6 0 ;;; 195.05 1.4103e-09 2806343000.0 1423520.0 1713790.0 1132090.0 1027679.0 1386550.0 1733190.0 1136000.0 1335490.0 1420190.0 1303790.0 False True 1344554.507883234 1631456.9559487654 1205066.3328080454 1125349.3031770426 1495663.5966096707 1722372.5183158119 1250837.9662915943 1330857.49689571 1162319.2960764775 1292239.4349332708 1.0404840399818511 1.2625036133748784 0.9325410602952797 0.870852005251762 1.1574198683132622 1.3328586574242354 0.967961457046995 1.0298846025887094 0.8994612489414532 1.0 20.301441976497582 LLQDFFNGR ddPTM_KYSE-520_SHP099_60min_R1 1 LLQDFFNGR 9 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 101.46 0.023400999999999998 27518000.0 106890.0 111850.0 95945.0 68480.0 113730.0 102420.0 82234.0 107970.0 111700.0 89550.0 False True 100960.59862006767 106476.55810972734 102129.76821742777 74988.31861073719 122679.90396481755 101780.75878922995 90547.0152464991 107595.4772703875 91418.0957278552 88756.65666884572 1.1374988920183788 1.1996458869219826 1.150671645941753 0.8448754316030774 1.3822051051623168 1.1467394402763234 1.0201715414352894 1.2122524812063404 1.029985796659054 1.0 16.43756770393295 -7.9210436414375 7.08585868150734 1.000411431605893 1.134003537464922 0.12466489382814272 0.13002809388428496 0.42278039025991787 29.116805342703557 0.12271947447517695 0.031780589588839635 1.1993787737713445e-08 7.9210436414375 0.13359210585902903 LLQDSSS(ph)PVDLAK ddPTM_KYSE-520_SHP099_60min_R1 1 LLQDSSSPVDLAK 13 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 LLQDS(0.001)S(0.056)S(0.943)PVDLAK 194.0 1.9185e-08 242060000.0 778700.0 760260.0 639210.0 476830.0 500790.0 628450.0 585550.0 641680.0 774870.0 707180.0 True False 735503.9587000356 723735.9684264753 680414.4993721609 522147.77983583265 540199.323894672 624527.6104383086 644743.1084172913 639454.1618492376 634173.1408831073 700914.935377714 1.049348389621177 1.0325589196304732 0.9707518916050695 0.7449517102306487 0.7707059681979319 0.8910176954665101 0.9198592808838459 0.9123135056390888 0.9047790379033079 1.0 19.41887984056236 -5.024065728097422 8.228715858178743 0.8706943694872911 1.0316507119660863 0.47452868059701037 0.06969404702281323 0.19996474705331146 61.57220101073634 0.02009436355340491 0.036542286345410686 9.460939643767311e-06 5.024065728097422 0.1609563424787952 LLQDYSELEEENIS(ph)LQK ddPTM_KYSE-520_SHP099_60min_R1 2 LLQDYSELEEENISLQK 17 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 LLQDYSELEEENIS(1)LQK;LLQDYSELEEENIS(1)LQK 228.49 1.0465e-15 21527000.0 108449.0 121464.0 98396.0 95301.0 102962.0 111535.0 89636.0 120384.0 137140.0 134221.0 True False 102433.11778227823 115628.68711881893 104738.76359916656 104358.37838670949 111064.52362635681 110838.86869319258 98697.28164305737 119966.41600183671 112238.8330180669 133031.9063623579 0.7699890994816432 0.8691801108514874 0.7873206245265306 0.7844612712867074 0.8348713227023492 0.8331750759948144 0.7419068428157496 0.9017867914714169 0.843698598983811 1.0 17.021412777533588 -8.326108917594796 0.8767578614075389 0.9997929077277432 0.8076897350036747 0.6418337467953543 0.042582363137114713 0.6790490677722603 0.9734045168807669 0.0398266453653449 0.013489240635949508 4.71944666459466e-09 8.326108917594796 -0.19210317272406852 LLQISPSS(ph)GTTVTSVVGFSCDGMRPEAIR ddPTM_KYSE-520_SHP099_60min_R1 1 LLQISPSSGTTVTSVVGFSCDGMRPEAIR 29 1 O95819-3;E7EX83;G5E948;C9J840;H7C360;E7ENQ1;H7C0P6;G3XAA2;A0A0D9SG62;A0A0D9SEY1;O95819-4;O95819-2;O95819;O95819-5;O95819-6;E7EN19 O95819-3 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 LLQIS(0.168)PS(0.168)S(0.198)GT(0.198)T(0.198)VT(0.01)S(0.01)VVGFS(0.05)CDGMRPEAIR 62.666000000000004 0.006136 0.0 40267.0 58029.0 54012.0 43571.0 50447.0 56095.0 43671.0 47595.0 61763.0 42587.0 True False 38033.30923972559 55241.19973669524 57493.69994225553 47711.97473990118 54416.891895833585 55744.89029761628 48085.69086788746 47429.90405375652 50548.39611852745 42209.712312184616 0.901055874497078 1.3087319650067561 1.3620964653118213 1.1303553643536262 1.2892030984093 1.3206650139030793 1.1392091590732456 1.1236727628694356 1.197553675435398 1.0 15.365287375933443 -8.367903145474958 0.7426804489992685 1.0007126933928752 1.2209442939010668 0.1725112132014729 0.12838413279657496 2.1351699339382915 2.2040352135118715 0.13237501360620307 0.04654732443039526 4.2864410414030774e-09 8.367903145474958 0.22023160050819168 LLQLS(ph)LER ddPTM_KYSE-520_SHP099_60min_R1 4 LLQLSLER 8 0 Q9Y2J4-3;Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4;D6RCL7 Q9Y2J4-3 AMOTL2 Angiomotin-like protein 2 1 LLQLS(1)LER;LLQLS(1)LER;LLQLS(1)LER;LLQLS(1)LER 108.47 0.0031234 0.0 275873.0 219257.0 195331.0 160351.0 165808.0 181197.0 139157.0 149350.0 236710.0 171777.0 True False 260569.77475080857 208723.5646085336 207922.3488006501 175590.71082871378 178856.14628153061 180066.08231138546 153224.34760144306 148831.93970855218 193729.430973506 170255.18942048374 1.5304659766186186 1.2259453900876025 1.2212394201221013 1.031338377563651 1.0505180305535642 1.0576246334945567 0.8999687358898697 0.8741697695979064 1.1378768050062034 1.0 17.377339247047708 -1.8793109887143626 0.4997478664909236 0.9724259188792489 7.780183233794269 0.8197071279553234 0.07680405387855527 16.49559855758119 0.43176516266290793 0.04236716946615091 106.89516062556973 0.013203498221587935 1.8793109887143626 6.807757314915021 LLQLVEDR ddPTM_KYSE-520_SHP099_60min_R1 4 LLQLVEDR 8 0 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ;;; 173.73 0.00073632 234525000.0 379552.0 467597.0 421744.0 279909.0 393380.0 485959.0 367475.0 375577.0 466949.0 448303.0 False True 358497.49394184654 445132.9382425938 448930.29305425874 306511.4672022902 424336.76797397324 482925.94962366193 404622.9592103905 374274.21104733093 382162.8324263763 444331.3841944564 0.8068246059003438 1.0018039555085458 1.0103501778703745 0.6898262830521759 0.9550006663231047 1.0868598681121184 0.9106333101901981 0.8423312517657637 0.8600851662081272 1.0 18.76127652040464 -4.230015977557206 22.15715091934926 0.9239272884360671 0.8068236849680758 0.10456058238743293 0.10608820628904136 6814.173997962394 4804411.932374626 0.0273947789134322 2.71423402815058 5.888219923814575e-05 4.230015977557206 -0.11710360346799131 LLQLVEDRGS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 6 LLQLVEDRGSGR 12 1 P17844-2;P17844;J3KTA4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 1 LLQLVEDRGS(1)GR;LLQLVEDRGS(1)GR;LLQLVEDRGS(1)GR;LLQLVEDRGS(1)GR;LLQLVEDRGS(1)GR;LLQLVEDRGS(1)GR 186.85 6.571900000000001e-08 3011320000.0 1685410.0 1673850.0 1651810.0 1394560.0 1443960.0 1381830.0 1196892.0 1316220.0 1775700.0 1465130.0 True False 1591916.9475184632 1593435.7334999274 1758288.3155894463 1527098.563110247 1557591.4369914536 1373205.486406189 1317885.5239002449 1311654.3400280566 1453277.6417542729 1452150.088053893 1.0962482188407119 1.0972941065860342 1.210817208258291 1.0516120721080535 1.07261050342177 0.9456360590429725 0.9075408490773955 0.9032498436755098 1.0007764718741234 1.0 20.46975914118455 -6.052354323757545 1.8568052732518339 0.9407438296778964 1.1241461994662625 0.7202884795423607 0.04841696152124556 0.17454145007865132 1.2049828086242216 0.018497162788042056 0.019613447596952927 8.864325115776128e-07 6.052354323757545 0.1834023697883661 LLQQQQAVPVPPAPS(ph)SPPPLWAGLAK ddPTM_KYSE-520_SHP099_60min_R1 1 LLQQQQAVPVPPAPSSPPPLWAGLAK 26 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 LLQQQQAVPVPPAPS(0.537)S(0.463)PPPLWAGLAK 47.757 0.065947 89167000.0 117830.0 170480.0 123900.0 104900.0 123480.0 223320.0 148610.0 209330.0 207850.0 222020.0 True False 111293.73501171834 162289.88490430315 131886.7922470092 114869.66446066504 133197.1734949062 221926.1770436522 163632.9490938324 208603.8830879891 170109.67947211012 220053.0755289465 0.5057585982118137 0.7375033705582316 0.5993408268891037 0.5220089025547598 0.605295668668739 1.0085120442429776 0.7436067353319386 0.9479707683546947 0.7730393181881856 1.0 17.747492009856398 -6.242994939802235 24.08125922801532 0.8819352443184765 0.5982541298648101 0.6942443269157029 0.09956135952161517 295.8172267816678 386222.08332117775 0.03123342630385898 0.03116869086190206 5.71485295314534e-07 6.242994939802235 -0.2836811144536664 LLQTCFS(ph)SPADDSMDR ddPTM_KYSE-520_SHP099_60min_R1 4 LLQTCFSSPADDSMDR 16 0 Q9NZL4-2;Q9NZL4;Q9NZL4-3 Q9NZL4-2 HSPBP1 Hsp70-binding protein 1 1 LLQTCFS(0.737)S(0.263)PADDSMDR;LLQT(0.006)CFS(0.744)S(0.25)PADDSMDR;LLQTCFS(0.662)S(0.338)PADDSMDR;LLQTCFS(0.851)S(0.149)PADDSMDR 268.21 1.8379999999999998e-29 2378070000.0 1844630.0 1726890.0 1611220.0 1330430.0 1502650.0 1699760.0 1418590.0 1440570.0 1872210.0 1600080.0 True False 1742304.69672126 1643927.6122852657 1715081.8192431505 1456873.6671916363 1620900.0060910333 1689151.1673460423 1561994.9213042164 1435572.9989015667 1532263.8585733895 1585904.5360434016 1.0986188998917008 1.0365867395692197 1.0814533789795615 0.9186389433164254 1.0220665678496264 1.0651026773403562 0.9849236734016562 0.9052077008891785 0.9661766037924088 1.0 20.59687449955781 -1.1364062440421365 0.32301333490806367 0.9647767244594863 2.1792427259123563 0.3735712828157073 0.049287953393543575 58.02579756236259 0.9006361405287009 0.0484763368071322 41.15478156968102 0.0730455487366182 1.1364062440421365 1.21446600145287 LLQTCFSS(ph)PADDSMDR ddPTM_KYSE-520_SHP099_60min_R1 7 LLQTCFSSPADDSMDR 16 0 Q9NZL4-2;Q9NZL4;Q9NZL4-3 Q9NZL4-2 HSPBP1 Hsp70-binding protein 1 1 LLQTCFS(0.371)S(0.629)PADDSMDR;LLQTCFS(0.27)S(0.73)PADDSMDR;LLQTCFS(0.009)S(0.991)PADDSMDR;LLQTCFS(0.395)S(0.605)PADDSMDR;LLQTCFS(0.079)S(0.921)PADDSMDR;LLQTCFS(0.227)S(0.773)PADDSMDR;LLQT(0.004)CFS(0.1)S(0.896)PADDSMDR 379.21 2.3277999999999998e-73 6723020000.0 4337940.0 4201100.0 3766830.0 3503520.0 3852290.0 4157010.0 3585960.0 3828160.0 4706300.0 4058490.0 True False 4097305.8207309977 3999272.8500203392 4009645.8889411003 3836493.487428305 4155443.3064681916 4131064.5586254355 3948463.8323970055 3814881.006459265 3851754.556168349 4022534.9360574386 1.018588001313133 0.994217058047506 0.9967957898884102 0.9537501969314215 1.033040948686208 1.026980405215416 0.9815859638665981 0.9483773459027558 0.9575440903301452 1.0 21.939673520256225 -6.996292084481849 24.736138139957205 0.9647727588768501 1.0023536523686551 0.30226716571639445 0.02415192086045201 112.89107865126842 753112.9878215413 0.010474470033676658 0.00702391665126158 1.0085743418829613e-07 6.996292084481849 0.037580893491805045 LLQTCFSSPADDS(ph)MDR ddPTM_KYSE-520_SHP099_60min_R1 1 LLQTCFSSPADDSMDR 16 0 Q9NZL4-2;Q9NZL4;Q9NZL4-3 Q9NZL4-2 HSPBP1 Hsp70-binding protein 1 1 LLQTCFSSPADDS(1)MDR 73.983 0.016002000000000002 342010000.0 226280.0 219520.0 179340.0 147080.0 173900.0 155310.0 165560.0 159020.0 189210.0 215120.0 True False 213727.79732200352 208973.92969376236 190900.54335414543 161058.4389787854 187584.94064434883 154340.6526806807 182296.4205098912 158468.39673554696 154854.23359594878 213214.20416082736 1.0024088130675795 0.9801126079580207 0.8953462744449673 0.7553832523151183 0.8797957030238642 0.7238760348455098 0.8549919140114376 0.7432356458578826 0.7262847904783225 1.0 17.701944026932498 -4.942959803725153 2.7057479395239166 0.8021595371203756 0.995562881240184 0.43321530498413674 0.08136817509503959 0.22330463820599875 3.2826209030948488 0.02116680409554879 0.052098992464954676 1.140355328655775e-05 4.942959803725153 0.19340334411980842 LLQYGDMEEGAS(ph)PPTLESLPEQLPVADMR ddPTM_KYSE-520_SHP099_60min_R1 2 LLQYGDMEEGASPPTLESLPEQLPVADMR 29 0 F8W9E7;Q96BJ8-2;Q96BJ8;Q96BJ8-3 F8W9E7 ELMO3 Engulfment and cell motility protein 3 1 LLQYGDMEEGAS(0.964)PPT(0.035)LESLPEQLPVADMR;LLQY(0.001)GDMEEGAS(0.918)PPT(0.078)LES(0.003)LPEQLPVADMR 98.34200000000001 0.0017940999999999999 110343000.0 68090.0 99208.0 50245.0 54805.0 53672.0 87023.0 54873.0 70426.0 86455.0 80645.0 True False 64312.91196595021 94441.89876575612 53483.87309484247 60013.65072227594 57895.68104809369 86479.85717745719 60420.09834887199 70181.70864355203 70756.95135319357 79930.54804086052 0.8046099212665654 1.1815494961635618 0.6691293179611567 0.750822460163753 0.7243248353370153 1.0819374982046746 0.7559074700449346 0.8780336224852996 0.8852304042382217 1.0 16.286459360603956 -8.276949113745436 1.8749043096074303 0.999867863442065 0.8566533376618471 0.0742978702856738 0.1527777319842853 3.421626972034042 18.313523773841137 0.14645796274905065 0.04097669749709404 5.2850717329657145e-09 8.276949113745436 -0.14321452578021787 LLRDDEAHLQEDQGEEECFHDCS(ph)ASFEEEPGADKVENK ddPTM_KYSE-520_SHP099_60min_R1 1 LLRDDEAHLQEDQGEEECFHDCSASFEEEPGADKVENK 38 2 Q99614 Q99614 TTC1 Tetratricopeptide repeat protein 1 1 LLRDDEAHLQEDQGEEECFHDCS(0.5)AS(0.5)FEEEPGADKVENK 51.617 0.031616000000000005 166710000.0 140120.0 126360.0 132530.0 131170.0 126990.0 123850.0 121470.0 120220.0 169370.0 129260.0 True False 132347.26427770514 120289.47592977314 141073.0958554975 143636.3573623015 136983.3905257382 123077.00621017508 133749.37303295766 119802.98487955898 138616.67747024927 128114.85696275835 1.0330360382494679 0.938919019866213 1.1011454814838997 1.1211530088509178 1.069223303005036 0.960677076242237 1.0439801924911583 0.9351217159332618 1.081971917671841 1.0 16.967078263337566 -6.241538374992972 24.782289516640553 1.0027721582778033 1.052869337397317 0.14291853937814647 0.05913180357754141 1555.749964323697 1937343.9054590254 0.020258231281316885 0.020238603376447898 5.734051972569583e-07 6.241538374992972 0.050097179119513724 LLRPNS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 LLRPNSLR 8 1 A0A0A0MRB5;Q8WXG6-6;Q8WXG6-8;Q8WXG6-5;Q8WXG6-4;Q8WXG6-7;Q8WXG6-3;Q8WXG6-2;Q8WXG6 A0A0A0MRB5 MADD MAP kinase-activating death domain protein 1 LLRPNS(1)LR 134.57 0.00048604 281300000.0 155830.0 139610.0 160280.0 173310.0 172710.0 166970.0 179250.0 180820.0 206780.0 194220.0 True False 147185.79926059642 132902.9260411177 170611.90525706732 189781.33029244863 186301.29441452256 165927.87829562314 197370.33931141548 180192.7776237054 169233.96449960503 192499.36190087357 0.7646040891106377 0.6904070991651146 0.8862985496280394 0.9858803084769467 0.9678021400946635 0.8619658613781107 1.0253038626333224 0.9360694801497296 0.8791403920951752 1.0 17.554494137989956 -4.892509962400495 4.305334936026182 0.9476658146781657 0.7287475278353579 0.7476384665976119 0.051058911721240836 0.09669563639393976 3.150907496004948 0.013275442562189129 0.02972918132425082 1.2808257129861936e-05 4.892509962400495 -0.21891828684280779 LLS(ph)DSLPPSTGTFQEAQSR ddPTM_KYSE-520_SHP099_60min_R1 5 LLSDSLPPSTGTFQEAQSR 19 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 LLS(0.999)DS(0.001)LPPSTGTFQEAQSR;LLS(0.922)DS(0.078)LPPSTGTFQEAQSR;LLS(0.996)DS(0.004)LPPSTGTFQEAQSR;LLS(0.993)DS(0.007)LPPSTGTFQEAQSR;LLS(0.996)DS(0.004)LPPSTGTFQEAQSR 269.61 2.1694e-29 1100400000.0 1208560.0 1249910.0 1134200.0 1001727.0 995852.0 1263770.0 1145575.0 1364120.0 1630140.0 1395720.0 True False 1141518.7675953694 1189862.4474468403 1207312.3467841633 1096930.8328997947 1074219.886777205 1255882.3426583216 1261380.9007345873 1359388.1861080022 1334147.6684852815 1383355.0066537287 0.8251813613315718 0.8601280522525178 0.8727422396833591 0.7929496243724301 0.7765323301758186 0.9078525299852296 0.9118273289701745 0.9826748589982689 0.9644289875471103 1.0 20.39974000825312 -6.789868246767982 1.6723343585319015 0.9796915502769661 0.8297505659382934 0.8077590253348185 0.03242937503106738 0.1719844589847235 0.9796823125768395 0.019511002585782304 0.011642800946114761 1.6223021854383543e-07 6.789868246767982 -0.14994098433867264 LLS(ph)FQR ddPTM_KYSE-520_SHP099_60min_R1 8 LLSFQR 6 0 Q13946-3;Q13946-2;Q13946;A1E5M1;Q9NP56 Q13946-3 PDE7A;PDE7B High affinity cAMP-specific 3,5-cyclic phosphodiesterase 7A;cAMP-specific 3,5-cyclic phosphodiesterase 7B 1 LLS(1)FQR;LLS(1)FQR;LLS(1)FQR;LLS(1)FQR;LLS(1)FQR;LLS(1)FQR;LLS(1)FQR;LLS(1)FQR 116.25 0.0084993 14770860000.0 4644960.0 4034340.0 3744530.0 3470350.0 3684920.0 3697470.0 3592520.0 3714660.0 4214480.0 3833780.0 True False 4387294.8093018085 3840524.250732203 3985908.3952598353 3800171.020601225 3974902.2396732233 3674392.718223141 3955686.9812164423 3701774.7114681583 3449236.670395089 3799815.691835702 1.1546072665388394 1.0107132982749578 1.0489741394099648 1.0000935121054126 1.0460776421903075 0.9669923533707055 1.0410207499578588 0.9741984905798997 0.9077378878681225 1.0 21.85749801237429 -1.0000000000000002 0.49772124140007673 0.9828464646252971 5.6359215918115675 0.5814657865378068 0.039999422012806665 80.66404370417561 0.8645259506585007 0.021982055134726352 391.897443799707 0.09999999999999995 1.0000000000000002 4.653075127186271 LLS(ph)FSPEEFPTLK ddPTM_KYSE-520_SHP099_60min_R1 2 LLSFSPEEFPTLK 13 0 Q5JSZ5;Q5JSZ5-5;A0A1W2PQP5 Q5JSZ5 PRRC2B Protein PRRC2B 1 LLS(0.674)FS(0.326)PEEFPTLK;LLS(1)FSPEEFPTLK 119.39 0.00010608 2367100000.0 191917.0 165700.0 126662.0 106225.0 101302.0 153975.0 139634.0 204600.0 205463.0 211756.0 True False 181270.98143294553 157739.5232792294 134826.83518636556 116320.5920622893 109273.89107046479 153013.98491087387 153749.56741651436 203890.29035399915 168156.09850073687 209880.0065836748 0.8636886589798946 0.7515700320713585 0.6423996138603745 0.5542242634527205 0.5206493598374248 0.7290546031590216 0.7325593796149306 0.9714612347923304 0.801201130292973 1.0 17.67920521478572 -7.07386835434547 2.645114446290391 0.9164625040873101 0.6660493413134027 0.523158098614736 0.10470206219065052 0.251133622894284 3.424657345169341 0.06215560488128642 0.032870811386439595 8.4359043263281e-08 7.07386835434547 -0.25041316277390746 LLS(ph)GASTK ddPTM_KYSE-520_SHP099_60min_R1 1 LLSGASTK 8 0 Q7Z6J0 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 1 LLS(0.993)GAS(0.006)T(0.001)K 77.533 0.02459 0.0 558580.0 487000.0 439580.0 414560.0 355610.0 441110.0 477040.0 571990.0 528260.0 528740.0 True False 527594.4538983764 463603.7889980974 467916.03015286813 453959.6577579913 383594.4838558758 438356.86886855337 525263.8586617444 570005.900193469 432341.300350911 524055.7749534949 1.0067524853536736 0.8846458929667133 0.892874484961818 0.8662430211713171 0.7319726299932794 0.8364698755727927 1.0023052578866376 1.0876817457913746 0.8249910048014971 1.0 18.99936083957105 -6.765013271252997 24.997569304023592 0.9860513342395082 0.8651186863068655 0.26884393597852996 0.08745836550011406 122.16706008043046 854482.2887725446 0.03658013053079845 0.025762967865968267 1.7178558917899526e-07 6.765013271252997 -0.12093264793264269 LLS(ph)GDSTEKR ddPTM_KYSE-520_SHP099_60min_R1 1 LLSGDSTEKR 10 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 LLS(0.509)GDS(0.245)T(0.245)EKR 99.28299999999999 0.0023829999999999997 476880000.0 574300.0 562770.0 493290.0 480430.0 532840.0 661540.0 577590.0 727310.0 843900.0 660770.0 True False 542442.4341613336 535733.6844650082 525088.262691906 526089.9227534535 574771.4765551172 657411.0834741964 635978.4339351769 724787.1313654294 690669.0329877977 654916.0918712815 0.8282624917818423 0.8180188135769648 0.8017641789676896 0.8032936268984703 0.8776261320940086 1.0038096355149648 0.9710838408596828 1.106687009773277 1.0545916363336865 1.0 19.320950554223394 -6.266616667139722 1.4953184121727818 1.0479556306178395 0.8090323783864947 0.9023145670494799 0.033776427429632015 0.11140376449628217 0.49812338083508223 0.01527707785125002 0.013783760094169569 5.412318339878268e-07 6.266616667139722 -0.2389232522313448 LLS(ph)NELK ddPTM_KYSE-520_SHP099_60min_R1 5 LLSNELK 7 0 P06753-4;P06753-3 P06753-4 TPM3 Tropomyosin alpha-3 chain 1 LLS(1)NELK;LLS(1)NELK;LLS(1)NELK;LLS(1)NELK;LLS(1)NELK 104.39 0.0042054 1711790000.0 2592780.0 2526780.0 2272110.0 2081420.0 2215620.0 2479230.0 2184590.0 2321790.0 2756830.0 2471140.0 True False 2448953.3248212095 2405389.696025897 2418573.846104538 2279237.5309982593 2389976.688846647 2463756.205946329 2405429.676743793 2313736.2523998623 2256259.1660288554 2449247.6221178295 0.9998798417546833 0.9820933066563481 0.9874762454656307 0.9305868097679054 0.9758003507951017 1.0059236900742416 0.9821096303295997 0.9446722460831493 0.9212050042036584 1.0 21.22390720894347 -7.258243751037347 24.218613526063812 0.9497039678916597 0.9797496173911235 0.15138783888827456 0.026383422624763505 292.91137825956474 2219912.263901323 0.013159494978421612 0.007179915681743705 5.517676686133089e-08 7.258243751037347 0.030045649499463867 LLS(ph)PLSSAR ddPTM_KYSE-520_SHP099_60min_R1 14 LLSPLSSAR 9 0 A0A087WZ13;Q8IY67-2;E9PAU2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 LLS(0.999)PLS(0.001)SAR;LLS(1)PLSSAR;LLS(1)PLSSAR;LLS(1)PLSSAR;LLS(0.952)PLS(0.048)SAR;LLS(0.989)PLS(0.011)SAR;LLS(0.999)PLS(0.001)SAR;LLS(1)PLSSAR;LLS(0.954)PLS(0.046)SAR;LLS(0.997)PLS(0.003)SAR;LLS(0.999)PLS(0.001)SAR;LLS(0.943)PLS(0.057)SAR;LLS(0.997)PLS(0.003)SAR;LLS(0.994)PLS(0.006)SAR 220.82 4.5717e-09 48247820000.0 18067174.0 19004084.0 15782052.0 13346736.0 14270699.0 18583215.0 14737932.0 18268840.0 20964750.0 19429892.0 True False 17064951.84220157 18091099.27892835 16799388.324096035 14615205.776597494 15393721.822129764 18467230.26209139 16227785.99491533 18205469.658019323 17158079.878339764 19257758.273107234 0.8861338687604237 0.9394187538531896 0.8723439190508365 0.7589256012734931 0.7993517004326792 0.9589501540207934 0.8426622540784952 0.9453576786994261 0.8909697398320968 1.0 24.19893643818727 -8.075647614151931 0.6874995181614232 0.9979197136258845 0.8616967146860426 0.31593089084653625 0.05867257726480434 1.0986264052896066 1.1814555139613447 0.06326244910205805 0.025024999157083852 8.401413994212335e-09 8.075647614151931 -0.1362229989398419 LLS(ph)PQMS(ph)GEEEDSDLAAK ddPTM_KYSE-520_SHP099_60min_R1 1 LLSPQMSGEEEDSDLAAK 18 0 P42858;A0A3B3IU44 P42858 HTT Huntingtin 2 LLS(1)PQMS(0.998)GEEEDS(0.002)DLAAK 61.648 0.022718000000000002 0.0 81275.0 84222.0 73298.0 71863.0 76323.0 89687.0 79184.0 86925.0 114480.0 87993.0 True False 76766.51373230437 80175.84870020064 78022.90636094652 78692.83791360114 82329.18588153317 89127.23016529651 87188.69148136754 86623.47746344745 93693.31780595212 87213.4504775181 0.8802141563255 0.9193060045350274 0.8946201065747225 0.9023016230035136 0.9439964298024879 1.0219436299939968 0.9997161103474866 0.9932352978715968 1.074298944634743 1.0 16.412263031074296 -6.074141686711773 2.42419091228988 1.0173266868326334 0.8997545865505475 0.8539499639939276 0.023238939611781112 0.10745679894218291 1.2473607353047962 0.008212128071862569 0.008549002364101227 8.430596682929407e-07 6.074141686711773 -0.11757210028208587 LLS(ph)PQQPALQR ddPTM_KYSE-520_SHP099_60min_R1 4 LLSPQQPALQR 11 0 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 LLS(1)PQQPALQR;LLS(1)PQQPALQR;LLS(1)PQQPALQR;LLS(1)PQQPALQR 187.1 9.626700000000001e-07 1908680000.0 1384250.0 1638070.0 1451710.0 1113100.0 1152970.0 1440960.0 1067680.0 1336080.0 1472430.0 1431640.0 True False 1307462.8930660386 1559374.6584068025 1545289.5494181253 1218888.689334282 1243702.179498072 1431966.434143026 1175611.513952649 1331445.4503234175 1205073.8289397112 1418956.7833990653 0.921425450276261 1.0989585283008907 1.0890321449511902 0.8590033915017999 0.8764905274414514 1.0091684615741408 0.8285041008342124 0.9383269919849023 0.8492674639836427 1.0 20.436399219804173 -5.261363174751215 24.999999971712406 0.9056155362042525 1.0427206923831 0.39219873811279404 0.07270756465273977 6.398613748608947 2098830.2775698206 0.019379810928203386 0.03098217854518917 5.478186650217051e-06 5.261363174751215 0.13710515617884755 LLS(ph)PRPS(ph)LLTPTGDPR ddPTM_KYSE-520_SHP099_60min_R1 1 LLSPRPSLLTPTGDPR 16 1 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J7T7;A0A384DVL6 C9JE98 NCOR2 Nuclear receptor corepressor 2 2 LLS(1)PRPS(0.611)LLT(0.386)PT(0.003)GDPR 103.17 0.00080839 0.0 116430.0 109940.0 107230.0 84427.0 87528.0 99829.0 77854.0 95433.0 136580.0 99501.0 True False 109971.39580254909 104658.31737669578 114142.21737406633 92450.91669609681 94415.95563380419 99205.93018131275 85724.2421018185 95101.96519722961 111780.51490161571 98619.49855060648 1.1151080406895133 1.0612335178624994 1.1574000988809974 0.9374506872863051 0.9573761479364524 1.0059464065354717 0.8692423238983434 0.9643322729777231 1.1334524768877796 1.0 16.589585296752784 -5.265052556871381 24.98814564325282 0.9750124192945882 1.1062458504017085 0.442237100929768 0.06665527389551286 283.1833004364314 1958453.9204964472 0.01882101638911935 0.029185315056925964 5.431845931249125e-06 5.265052556871381 0.13123343110712038 LLS(ph)PRPSLLT(ph)PTGDPR ddPTM_KYSE-520_SHP099_60min_R1 1 LLSPRPSLLTPTGDPR 16 1 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J7T7;A0A384DVL6 C9JE98 NCOR2 Nuclear receptor corepressor 2 2 LLS(1)PRPS(0.384)LLT(0.594)PT(0.022)GDPR 95.95700000000001 0.00063718 0.0 83836.0 75969.0 69387.0 68178.0 68044.0 66179.0 59501.0 75582.0 90925.0 71816.0 True False 79185.44995707739 72319.3352082062 73859.79704312536 74657.61662153683 73398.67568259958 65765.95231314632 65515.94175379941 75319.82368297149 74415.31203272364 71179.7661120025 1.1124713423822976 1.016009733642712 1.0376515838350155 1.0488601002714995 1.0311733192141372 0.923941674796494 0.9204292923737488 1.0581634050954107 1.045455978537917 1.0 16.11917957188565 -6.016774559899675 23.59773890868001 0.9876488128710544 1.0486670811596375 0.2915078802896851 0.04722547602174963 518.7087485730887 729697.7917218608 0.016616758018014037 0.017045686752101132 9.62111576103399e-07 6.016774559899675 0.06101826828858303 LLS(ph)PRPSLLTPTGDPR ddPTM_KYSE-520_SHP099_60min_R1 5 LLSPRPSLLTPTGDPR 16 1 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J7T7;A0A384DVL6 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 LLS(1)PRPSLLTPTGDPR;LLS(0.947)PRPS(0.047)LLT(0.003)PT(0.003)GDPR;LLS(1)PRPSLLTPTGDPR;LLS(0.994)PRPS(0.002)LLT(0.003)PTGDPR;LLS(0.999)PRPS(0.001)LLTPTGDPR 96.67299999999999 0.001097 3931620000.0 5031470.0 5474820.0 4459690.0 3269590.0 3837350.0 5036950.0 3774470.0 4564720.0 5897450.0 5195650.0 True False 4752364.329113223 5211801.429327639 4747168.753156294 3580330.850561919 4139327.613465166 5005512.5266882675 4156030.2628773153 4548886.051733661 4826621.742616288 5149620.5831545275 0.9228571799365546 1.0120748403050348 0.9218482559055445 0.6952610959871337 0.8038121540460207 0.9720157914278836 0.8070556258984494 0.883343923747316 0.937277157545386 1.0 22.296034709781953 -9.57905071049277 13.643429204213446 1.0000080056053733 0.8812367576976365 0.13390390427405563 0.08830080016717759 0.0 0.0 0.09166692560527248 0.022232495096833803 2.6360235719700344e-10 9.57905071049277 -0.11877124790773674 LLS(ph)PSNEK ddPTM_KYSE-520_SHP099_60min_R1 2 LLSPSNEK 8 0 Q14694;Q14694-3;Q14694-2;H3BNA1;J3KT19 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 LLS(0.998)PS(0.002)NEK;LLS(0.843)PS(0.157)NEK 126.29 0.00086267 1582420000.0 2656700.0 2606700.0 2189180.0 1839180.0 2034060.0 2374200.0 2096050.0 2402070.0 2867900.0 2390100.0 True False 2509327.554999848 2481470.2192635285 2330298.045611847 2013975.114230371 2194128.9497817387 2359381.7371352287 2307939.1894766665 2393737.779817351 2347161.6538757035 2368925.5734696607 1.059268211337069 1.0475087301409087 0.9836940728360505 0.8501639463837568 0.9262126992736606 0.9959712384207776 0.9742556774784317 1.010474033724643 0.9908127465726665 1.0 21.175801442248897 -9.825938490211566 13.993432431797348 1.0000155385678389 0.9795107196106506 0.007229179688480469 0.056532098055840696 0.0 0.0 0.060920293797642716 0.014775341533608318 1.4930058512961921e-10 9.825938490211566 -0.020504818957188253 LLS(ph)SNEDDANILSS(ph)PTDR ddPTM_KYSE-520_SHP099_60min_R1 1 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 2 LLS(0.958)S(0.042)NEDDANILS(0.03)S(0.964)PT(0.006)DR 165.14 2.4986000000000003e-08 61099000.0 113030.0 123660.0 118510.0 135110.0 139560.0 173910.0 182010.0 200910.0 237790.0 191930.0 True False 106760.00058028118 117719.18798255571 126149.34422270424 147950.81377769713 150542.5780122214 172824.56318136115 200409.34704641963 200213.09010274638 194613.3301980903 190229.64951928062 0.5612164079052282 0.6188267090857692 0.6631423889046194 0.7777484432714662 0.79137284010484 0.9085048709183718 1.0535126756153081 1.0524809913107362 1.0230441505300958 1.0 17.537382599082967 -5.870010405565842 0.7546023171223507 1.0530595732460366 0.5698475999823007 0.9607479583078743 0.0353546189843856 0.12960586207329092 0.16265439822469496 0.022720510099189392 0.0347351720886759 1.348930562231802e-06 5.870010405565842 -0.4832119732637359 LLS(ph)SNEDDANILSSPTDR ddPTM_KYSE-520_SHP099_60min_R1 2 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLS(0.919)S(0.081)NEDDANILSSPTDR;LLS(0.903)S(0.097)NEDDANILSSPTDR 225.29 1.2928999999999999e-18 401650000.0 229503.0 262005.0 222557.0 193493.0 219469.0 261336.0 232425.0 291550.0 318929.0 280760.0 True False 216772.011087112 249417.8865224773 236903.38032379062 211882.51654420813 236739.96169220578 259704.90508633305 255920.78724940468 290538.68109828135 261019.5331458291 278272.6848279745 0.7789913380147908 0.8963074714884972 0.8513353744017026 0.7614204630799171 0.8507481136301832 0.9332748747757263 0.9196762787106196 1.0440790524513377 0.9379991187679412 1.0 18.086139775498456 -6.517221607977922 1.57454547990338 0.9874261533772883 0.8272731452282358 0.7048447885188531 0.04618970246967954 0.21922268876850237 1.0989466648353112 0.022898364589194867 0.017015566688070957 3.039333745365239e-07 6.517221607977922 -0.16015300814905253 LLS(ph)TKGDTLDVVLLEAR ddPTM_KYSE-520_SHP099_60min_R1 3 LLSTKGDTLDVVLLEAR 17 1 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 LLS(0.969)T(0.031)KGDTLDVVLLEAR;LLS(0.964)T(0.036)KGDTLDVVLLEAR;LLS(0.97)T(0.027)KGDT(0.003)LDVVLLEAR 229.15 6.1494999999999995e-19 283429000.0 263300.0 348940.0 284381.0 237578.0 282865.0 408910.0 322709.0 494940.0 590650.0 464640.0 True False 248694.22412446316 332176.3986303821 302712.65428568795 260157.34168956976 305124.8662183076 406357.8410125373 355331.57505633286 493223.16865986434 483402.8490748221 460523.6510844498 0.5400248685139912 0.7213014963469668 0.6573227098605131 0.5649163535400329 0.6625606860794093 0.8823821318528119 0.7715815989463112 1.071005077585946 1.0496808316717197 1.0 18.812915725055376 -6.768665792875591 1.0474433621800936 1.0528928214992257 0.6252801155720732 0.8297566299879959 0.077306285315518 0.20639114005620773 0.4472834035274906 0.055657757746365395 0.031394386817361175 1.7034688921686437e-07 6.768665792875591 -0.4276127059271525 LLS(ph)WSDNWR ddPTM_KYSE-520_SHP099_60min_R1 6 LLSWSDNWR 9 0 J3KSX6;Q8TCD5;J3KSY6 J3KSX6 NT5C 5(3)-deoxyribonucleotidase, cytosolic type 1 LLS(0.997)WS(0.003)DNWR;LLS(0.993)WS(0.007)DNWR;LLS(0.992)WS(0.008)DNWR;LLS(0.998)WS(0.002)DNWR;LLS(0.999)WS(0.001)DNWR;LLS(0.964)WS(0.036)DNWR 153.11 0.00028628 1119421000.0 2793370.0 2665410.0 2695880.0 2345130.0 2455950.0 2650170.0 2522890.0 2352400.0 3183220.0 2576680.0 True False 2638416.197654958 2537359.702738024 2869660.7383605093 2568010.4501109538 2649219.292555998 2633629.305999356 2777928.342233626 2344240.0734542855 2605227.4904460474 2553852.619826706 1.0331121604949898 0.993541946406523 1.1236594923614789 1.005543714689851 1.0373422773064185 1.0312377799538264 1.0877402715674818 0.917923005914631 1.0201166152739178 1.0 21.284243840339677 -7.253763038445312 24.995749264629122 0.9767648568118101 1.0433791579266445 0.32508998670851885 0.043010454021989976 630.1720984898325 2051975.653035063 0.019731659616855555 0.01112021521634897 5.574898458827011e-08 7.253763038445312 0.06661430111483435 LLSAEFLEQHYDR ddPTM_KYSE-520_SHP099_60min_R1 1 LLSAEFLEQHYDR 13 0 Q9Y376 Q9Y376 CAB39 Calcium-binding protein 39 0 152.99 7.6935e-06 205820000.0 145210.0 130570.0 90043.0 111500.0 151650.0 143630.0 108830.0 102020.0 110680.0 105510.0 False True 137154.91183104154 124297.22121043448 95847.31585389399 122096.9264763026 163583.99222953137 142733.55189315687 119831.59847844549 101666.11643164705 90583.30201574774 104575.2634855379 1.3115425891325552 1.1885910402475248 0.9165390806512199 1.167550741989647 1.5642704285622384 1.3648882836704115 1.1458885637425857 0.9721813079218953 0.8662019965005858 1.0 16.67418210740609 -7.186995615129663 3.1722974498223673 0.9323437870053627 1.2445788195535203 0.42743493333215066 0.15779486088362069 0.2860505467102986 5.591414999638658 0.0990270658676323 0.05018223446677383 6.501362544347481e-08 7.186995615129663 0.31223503254815765 LLSAER ddPTM_KYSE-520_SHP099_60min_R1 2 LLSAER 6 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4;P15924;P15924-3;P15924-2;A0A075B730;P58107 Q15149;Q15149-4;P15924;A0A075B730 PLEC;DSP;EPPK1 Plectin;Desmoplakin;Epiplakin 0 ; 132.01 0.053986 834280000.0 1147360.0 1347770.0 856780.0 714490.0 1194320.0 1381860.0 959460.0 1144560.0 1068660.0 1207870.0 False True 1083713.6535945446 1283021.1061559848 912009.4096964698 782394.9147807481 1288306.189248757 1373235.299165059 1056451.5802272297 1140589.7885023113 874618.2827263181 1197169.2115086406 0.9052301405487013 1.0717124144373509 0.7618049319420602 0.6535374508961811 1.076127064465071 1.147068673303538 0.8824580268781869 0.9527389925647776 0.7305719812357583 1.0 20.191195650888123 -3.9410021438843588 18.709263167087784 0.9199627866816829 0.718253920569194 0.0007638759568053821 0.1548368176357237 72883.77396182605 894139.96411712 0.03921119432882561 609812.3630220483 0.00011455072866621602 3.9410021438843588 -0.20170886611248884 LLSFS(ph)PEEFPTLK ddPTM_KYSE-520_SHP099_60min_R1 4 LLSFSPEEFPTLK 13 0 Q5JSZ5;Q5JSZ5-5;A0A1W2PQP5 Q5JSZ5 PRRC2B Protein PRRC2B 1 LLS(0.001)FS(0.999)PEEFPTLK;LLSFS(1)PEEFPTLK;LLS(0.001)FS(0.999)PEEFPTLK;LLSFS(1)PEEFPTLK 239.61 2.5961999999999997e-18 266877000.0 775090.0 806692.0 708626.0 617436.0 632189.0 696911.0 626257.0 685648.0 845826.0 759770.0 True False 732094.2125963911 767937.3054506223 754305.1658016888 676116.9318010977 681938.6776366308 692561.3199429912 689565.1692393259 683269.6471194458 692245.319938307 753039.0288921159 0.9721862805351016 1.0197842023944297 1.001681369571821 0.8978511150953393 0.9055821165602942 0.9196884801069335 0.9157097345323869 0.9073495807045805 0.919268847136317 1.0 19.52236511400856 -5.253011603281277 24.55572783640335 0.9185283137395999 1.0000739860484062 0.57138651643842 0.02921710192678543 299.22407962846603 871836.4473837323 0.007393568579049705 0.012529273970662733 5.5845527398499235e-06 5.253011603281277 0.08154567230880638 LLSGDS(ph)TEKR ddPTM_KYSE-520_SHP099_60min_R1 1 LLSGDSTEKR 10 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 LLS(0.074)GDS(0.463)T(0.463)EKR 103.43 0.0017127 396450000.0 697330.0 665000.0 641040.0 596390.0 658760.0 702800.0 754970.0 836860.0 1059600.0 765530.0 True False 658647.7148071093 633052.4018146493 682362.4641002647 653070.7262888089 710600.6641683227 698413.5645095761 831289.7353971512 833957.1279845927 867203.350342304 758747.9997733285 0.8680717642799407 0.8343381491664822 0.8993268704551662 0.8607215129185314 0.9365437067123873 0.920481589036443 1.095607152368763 1.0991226708126183 1.1429398833359374 1.0 19.533261282548587 -6.6604256527087475 2.3580877540957563 1.0971522703366998 0.8771496226499361 0.8337916446350473 0.04321782030974511 0.10768323275997767 1.2205203538374394 0.019096256686793097 0.013527220730670775 2.185618445758709e-07 6.6604256527087475 -0.2200026476867637 LLSIS(ph)GKR ddPTM_KYSE-520_SHP099_60min_R1 2 LLSISGKR 8 1 P06748;P06748-3;P06748-2;E5RI98 P06748;E5RI98 NPM1 Nucleophosmin 1 LLSIS(1)GKR;LLS(0.004)IS(0.996)GKR 100.79 0.0016847000000000001 9121800000.0 9075600.0 10109100.0 9881200.0 8047400.0 8579800.0 7477700.0 7814400.0 8235000.0 10792400.0 8122200.0 True False 8572158.376239937 9623443.661931543 10518157.962479005 8812222.476460965 9254981.447615774 7431028.900588015 8604355.81319456 8206434.707063456 8832772.214264149 8050243.626975987 1.0648321682483046 1.1954226614563361 1.306563931460801 1.094652893103958 1.1496523430176409 0.923081243862855 1.0688317288139912 1.0194020314570456 1.0972055783089527 1.0 22.940601013931747 -5.953658525758362 2.4995901610918323 1.0268046418916086 1.1809144979862827 0.4430766405108195 0.07597143763250275 0.2632371286936378 3.333891363415662 0.026160479770038814 0.02937485645916261 1.1126061962169471e-06 5.953658525758362 0.1541098560946741 LLSISGK ddPTM_KYSE-520_SHP099_60min_R1 2 LLSISGK 7 0 P06748;P06748-3;P06748-2;E5RI98 P06748;E5RI98 NPM1 Nucleophosmin 0 ; 138.24 0.013063 3333900000.0 3165500.0 4140000.0 2881500.0 3147500.0 3679800.0 3896100.0 2993900.0 3413200.0 3554300.0 3469300.0 False True 2989903.4047321957 3941108.18573331 3067246.1005630107 3446637.453669617 3969379.324802043 3871782.9947150857 3296552.6296482375 3401360.4058468705 2908928.716611603 3438564.7010745592 0.8695207636482292 1.1461492012936982 0.8920134902811307 1.0023477099594884 1.1543709861156903 1.125988117514597 0.9587001892440928 0.9891802835014091 0.8459717845944722 1.0 21.71337506135932 -6.969138616184377 24.59412391773383 0.9453335977109848 1.035447568858487 0.14484627645779247 0.0992872494792042 317.10253361880206 252705.335080222 0.0417218361961517 0.02812850942425201 1.0736466758688092e-07 6.969138616184377 0.09011397114750219 LLSKDDT(ph)SPPKDK ddPTM_KYSE-520_SHP099_60min_R1 2 LLSKDDTSPPKDK 13 2 Q5T5U3;E7ESW5;Q5T5U3-3;A0A1B0GV73;A0A1B0GTZ9 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 LLS(0.002)KDDT(0.623)S(0.375)PPKDK;LLSKDDT(0.5)S(0.5)PPKDK 98.281 0.0013019 1398670000.0 1570160.0 1221970.0 1237290.0 1080660.0 1170880.0 1080230.0 1128290.0 1148120.0 1592250.0 1067410.0 True False 1483060.094763642 1163264.7269856369 1317047.6931339968 1183365.601487723 1263021.594604112 1073487.8838790273 1242348.5642492434 1144137.4396932223 1303137.537356108 1057953.577832415 1.4018196316346934 1.0995423158065105 1.2449012137493083 1.1185420856671784 1.1938346077451243 1.0146833531944188 1.1742940241240314 1.081462801078082 1.2317530415900075 1.0 20.01284489384577 -2.0611289081807693 1.4796136649257308 1.1302925712993024 199.9924128795324 0.4926281247148542 0.08130467037141101 914.6581468299147 3.4800451912874393 0.021566833061631915 615883.950217631 0.008687025409409837 2.0611289081807693 198.8621203082331 LLSLLEKDEFK ddPTM_KYSE-520_SHP099_60min_R1 2 LLSLLEKDEFK 11 1 P35270 P35270 SPR Sepiapterin reductase 0 ; 172.11 1.2042000000000001e-05 195579000.0 549540.0 524210.0 331080.0 313140.0 571140.0 503210.0 366030.0 420180.0 438550.0 399010.0 False True 519055.92071916955 499026.1647447482 352421.9465467301 342900.731451026 616085.4686579264 500069.2797337281 403031.88450854947 418722.49365074927 358920.374945845 395475.0818250826 1.3124870429857989 1.2618397155183243 0.8911356561842884 0.8670602705701946 1.5578363769842245 1.2644773405847785 1.0191081639040136 1.0587835059503166 0.9075676103016633 1.0 18.593227270374047 -6.851840429515503 6.847476115126216 0.9983112433545825 1.1834169114574908 0.20043091573322613 0.191614590738452 0.4481139428849848 28.500646708090013 0.08819283198996906 0.059358838874162795 1.406564235526031e-07 6.851840429515503 0.1851056681029083 LLSNS(ph)QTLGNDMLMNTPR ddPTM_KYSE-520_SHP099_60min_R1 1 LLSNSQTLGNDMLMNTPR 18 0 H3BU04;Q9BVW5 H3BU04 TIPIN TIMELESS-interacting protein 1 LLSNS(0.994)QT(0.006)LGNDMLMNTPR 372.98 4.474499999999999e-66 0.0 101090.0 122700.0 68461.0 81339.0 96517.0 99081.0 92305.0 93519.0 118680.0 117100.0 True False 95482.33618208116 116805.30782354526 72874.105601473 89069.43410453797 104112.33879339045 98462.59872676914 101636.09020998725 93194.60441649864 97130.7036793361 116062.58510242138 0.8226797300596154 1.0063993294692553 0.6278862868439818 0.7674259023779038 0.8970361869978578 0.8483577945457544 0.8757007275022934 0.8029685392088889 0.8368821321153711 1.0 16.824543442448203 -5.766713389635339 24.990272625798703 0.8654931576324176 0.8076756690123881 0.10288901532704797 0.09893092391320074 393.90253583678526 1866458.6157501678 0.031060232741372387 0.03626756850588638 1.7111442031862299e-06 5.766713389635339 -0.057817488620029556 LLSPQMS(ph)GEEEDSDLAAK ddPTM_KYSE-520_SHP099_60min_R1 2 LLSPQMSGEEEDSDLAAK 18 0 P42858;A0A3B3IU44 P42858 HTT Huntingtin 1 LLSPQMS(1)GEEEDSDLAAK;LLSPQMS(1)GEEEDSDLAAK 245.1 9.5168e-24 413030000.0 244763.0 277001.0 190718.0 187376.0 223198.0 228489.0 198651.0 241839.0 277815.0 209110.0 True False 231185.50846705618 263693.45617302257 203011.98743958902 205184.15870335116 240762.41277709798 227062.9153973091 218732.58172692897 241000.11695464695 227370.79914623158 207257.4480851183 1.1154509070868754 1.2722990590172985 0.979516004443972 0.9899965506623644 1.161658676209405 1.0955597373950918 1.055366568235936 1.1628055791542455 1.0970452509521056 1.0 17.661064422345476 -8.860591428010242 0.010107232011586555 1.262836427997182e-07 2.1310402473601555 0.09836083147745456 0.0826790537418618 8736.65919942006 29.171803304097416 3176.9645189831376 2972.078988644107 1.3785057183296707e-09 8.860591428010242 2.131040121076513 LLSSNEDDANILS(ph)SPTDR ddPTM_KYSE-520_SHP099_60min_R1 1 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLSSNEDDANILS(0.498)S(0.498)PT(0.003)DR 62.203 0.023533000000000002 1723600000.0 949970.0 891110.0 720250.0 651970.0 738750.0 960300.0 755220.0 792380.0 845920.0 868640.0 True False 897273.2703817539 848299.7380166213 766678.4674407465 713933.0327780723 796885.4220874796 954306.4114948021 831565.0078369157 789631.4187228824 692322.2519078545 860944.5253916942 1.0421963830637424 0.9853128895043267 0.8905085575542042 0.8292439428118348 0.9255943891680242 1.108441233261379 0.965875248998869 0.9171687552849387 0.8041426961776387 1.0 19.71556075558891 -7.426354829584833 4.911185375505583 0.8899705696538442 0.9603293305921806 0.08176363786256169 0.08494012386612172 0.5487079376291973 21.051253480062236 0.05305503194977793 0.023978948795731262 3.7466676492996584e-08 7.426354829584833 0.07035876093833637 LLSSNEDDANILSS(ph)PTDR ddPTM_KYSE-520_SHP099_60min_R1 5 LLSSNEDDANILSSPTDR 18 0 H0YEG1;F5GY88;A0A0B4J1W0;O75448-2;O75448 H0YEG1 MED24 Mediator of RNA polymerase II transcription subunit 24 1 LLSSNEDDANILS(0.028)S(0.971)PTDR;LLSSNEDDANILS(0.245)S(0.75)PT(0.005)DR;LLSSNEDDANILS(0.026)S(0.973)PT(0.001)DR;LLSSNEDDANILS(0.004)S(0.992)PT(0.003)DR;LLSSNEDDANILS(0.008)S(0.988)PT(0.004)DR 301.57 1.874e-38 4747770000.0 4891980.0 5219210.0 4322030.0 3592290.0 3783280.0 4715210.0 3839510.0 3985220.0 4978120.0 4559190.0 True False 4620612.1174796475 4968471.317406071 4600634.969292506 3933700.1615386284 4081002.612081376 4685780.625371663 4227645.140806547 3971396.2019773438 4074218.8961929292 4518799.123596146 1.0225309846927821 1.0995114368907968 1.0181100870957134 0.8705189263664624 0.9031166246738662 1.0369526277243832 0.9355682837793656 0.8788609746424912 0.9016154037293406 1.0 22.107507994925044 -5.055816494221107 5.797644841646345 0.9309920129910667 1.060989190479185 0.5143825913143951 0.05198885010770319 0.15947517396922956 11.762333590202864 0.014652866882715632 0.026409467616532022 8.793940154384164e-06 5.055816494221107 0.12999717748811834 LLSSS(ph)LTADCSLR ddPTM_KYSE-520_SHP099_60min_R1 5 LLSSSLTADCSLR 13 0 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLSS(0.026)S(0.965)LT(0.009)ADCSLR;LLSS(0.031)S(0.923)LT(0.046)ADCSLR;LLSS(0.005)S(0.991)LT(0.005)ADCSLR;LLSS(0.001)S(0.973)LT(0.026)ADCSLR;LLS(0.001)S(0.251)S(0.748)LTADCSLR 379.61 3.777699999999999e-78 3228780000.0 2818300.0 3139060.0 2435190.0 2020020.0 2241780.0 3094950.0 2529150.0 3033520.0 3184360.0 3554240.0 True False 2661963.280858236 2988254.8457748764 2592166.243841762 2212002.093458844 2418195.3320166096 3075633.2690365864 2784821.164125336 3022997.4271488944 2606160.4951831046 3522752.1987568773 0.7556487458293547 0.8482727927412503 0.7358355335798232 0.6279187319049645 0.6864505919178624 0.8730768148046087 0.790524285275602 0.8581351331540327 0.7398080671421557 1.0 21.748271564112155 -6.265319055539655 24.98144393776343 0.8395807713475123 0.731911457623986 0.3515122896466333 0.08158535979396338 455.08251685651857 2930290.538451942 0.028925666866977104 0.0264627664236695 5.428513778263823e-07 6.265319055539655 -0.10766931372352628 LLSSSLT(ph)ADCSLRSPSGR ddPTM_KYSE-520_SHP099_60min_R1 1 LLSSSLTADCSLRSPSGR 18 1 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLSSS(0.001)LT(0.985)ADCS(0.013)LRS(0.001)PSGR 88.596 0.0047428 1073700000.0 523250.0 545540.0 573840.0 436560.0 487270.0 553820.0 423880.0 515610.0 802070.0 520380.0 True False 494224.27942698554 519331.4395277658 610830.6445764636 478050.53114345 525615.3768129488 550363.4039509022 466729.9270701415 513821.469254279 656434.3065393094 515769.83804951364 0.9582264083064513 1.0069054086057476 1.1843085801341957 0.9268679474381312 1.0190890161407422 1.067071711739118 0.9049190019237527 0.9962224064854145 1.2727272091399267 1.0 18.976367881978987 -7.689503868819456 24.99992730772481 1.1363931043053155 1.0099993215203669 0.2231211542662369 0.09578434767945249 55.30857936788016 19220.1670858703 0.06224351600867274 0.02352580890980546 2.0440717267457155e-08 7.689503868819456 -0.12639378278494862 LLSSSLTADCSLRS(ph)PSGR ddPTM_KYSE-520_SHP099_60min_R1 5 LLSSSLTADCSLRSPSGR 18 1 Q147X3;Q147X3-2 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 LLSSSLTADCSLRS(0.994)PS(0.006)GR;LLSSSLTADCS(0.001)LRS(0.751)PS(0.247)GR;LLSSSLT(0.008)ADCS(0.174)LRS(0.778)PS(0.04)GR;LLSSSLTADCSLRS(0.999)PSGR;LLSSSLT(0.001)ADCS(0.042)LRS(0.955)PS(0.002)GR 188.44 2.9856e-12 1812900000.0 1507941.0 1581568.0 1571830.0 1250784.0 1411200.0 1398137.0 1232208.0 1350888.0 2099740.0 1435457.0 True False 1424292.5067241439 1505587.0992980348 1673152.6768169226 1369658.1352980768 1522253.4113703582 1389410.708370414 1356771.6098311888 1346202.0848276296 1718480.14613793 1422739.9677486455 1.0010912317153464 1.0582306910801749 1.17600736237454 0.962690418731565 1.0699449273075414 0.9765738925357021 0.9536328778182527 0.946203884999358 1.2078666411946422 1.0 20.44024057586883 -5.2977140429793526 24.97455500035618 1.0123789053386545 1.076422045230747 0.10204051769235101 0.08317849517772673 1280.2210118038188 881410.4842863977 0.02328232393500546 0.03453479596297097 5.038322430852744e-06 5.2977140429793526 0.06404313989209243 LLSTCGLVQSVELQEKPDLAES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 LLSTCGLVQSVELQEKPDLAESPK 24 1 Q9Y3A4 Q9Y3A4 RRP7A Ribosomal RNA-processing protein 7 homolog A 1 LLSTCGLVQS(0.001)VELQEKPDLAES(0.999)PK;LLSTCGLVQSVELQEKPDLAES(1)PK;LLSTCGLVQSVELQEKPDLAES(1)PK;LLSTCGLVQSVELQEKPDLAES(1)PK 357.39 1.2166999999999999e-85 1700704000.0 1232090.0 1268543.0 1010353.0 860808.0 987705.0 1213540.0 981820.0 1239310.0 1345060.0 1198990.0 True False 1163743.5115894782 1207600.2901581388 1075481.9710019573 942618.9335086382 1065431.764227295 1205965.8467201947 1081071.9472398001 1235011.1228671272 1100831.0102033024 1188367.8814001034 0.9792788325938148 1.0161838846867657 0.9050076056707734 0.7932046534260667 0.8965504545377242 1.0148085164497695 0.9097115162403329 1.0392498334876485 0.9263385753124971 1.0 20.18055008771265 -6.249686903055832 24.507181260573823 0.9762054183099004 0.915837356670296 0.17378180609072302 0.0652391124250953 1173.321687733362 2446702.590959355 0.023443389628091428 0.02325515634041779 5.627468814187029e-07 6.249686903055832 -0.0603680616396044 LLSVKGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 LLSVKGSPK 9 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LLSVKGS(1)PK 78.903 0.019449 925510000.0 1839400.0 1893300.0 1801600.0 1212300.0 1525100.0 1683100.0 1251600.0 1319900.0 2170800.0 1588000.0 True False 1737364.815247008 1802343.0260987629 1917734.0186619204 1327516.6275087155 1645116.6933680077 1672595.1485857558 1378123.9424388704 1315321.5749669771 1776637.441414754 1573931.5554453065 1.1038375901647528 1.1451216032001041 1.2184354599329088 0.843439870632193 1.0452275943489557 1.0626860760235122 0.875593311329833 0.835691723961172 1.1287895177322984 1.0 20.58594137397731 -5.25012509319041 24.999283424778135 0.9663951225923613 1.154730561468628 0.444752575758811 0.09496043182875637 685.8649106660808 1515437.895562734 0.02596780458368735 0.04447491629229798 5.6217937300501384e-06 5.25012509319041 0.1883354388762668 LLT(ph)PTHSFLAR ddPTM_KYSE-520_SHP099_60min_R1 3 LLTPTHSFLAR 11 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LLT(0.999)PT(0.001)HSFLAR;LLT(0.964)PT(0.031)HS(0.005)FLAR;LLT(0.685)PT(0.273)HS(0.042)FLAR 108.24 0.0022982 785260000.0 1203940.0 1294440.0 1107990.0 841870.0 893697.0 1140200.0 875664.0 1195820.0 1295170.0 1078650.0 True False 1137155.048205112 1232253.159405948 1179412.8082466805 921881.0716825556 964025.8694596469 1133083.588864284 964184.6627770795 1191671.9795264858 1059999.7765787474 1069094.0001770002 1.0636623608558684 1.1526144185655658 1.1031890629368566 0.862301230322056 0.9017222707264674 1.0598540340481657 0.9018708014612824 1.1146559416938 0.9914935229299322 1.0 20.027957277038432 -5.110448308072206 10.103635924916807 0.9781309683453163 1.1130334344503676 0.39337777461477663 0.07419658315877257 0.4184351042252158 35.47077689002355 0.020576754954351913 0.0356985558998892 7.754462354034865e-06 5.110448308072206 0.1349024661050513 LLTCLGQNLHS(ph)PDLARPR ddPTM_KYSE-520_SHP099_60min_R1 2 LLTCLGQNLHSPDLARPR 18 1 O15021;O15021-2;O15021-3;O15021-6;H7C1I9 O15021 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 LLTCLGQNLHS(1)PDLARPR;LLTCLGQNLHS(1)PDLARPR 148.2 2.6258999999999997e-06 942990000.0 301820.0 273680.0 247280.0 219520.0 307520.0 286400.0 266500.0 229180.0 323170.0 243390.0 True False 285077.4429367463 260532.00199794516 263220.0644619892 240383.1147989054 331720.0744505468 284612.47136531427 293440.4207893568 228385.02807101412 264490.4744527393 241233.7539545548 1.1817477374681615 1.0799981251671187 1.0911411033779972 0.9964737971295275 1.3750980905973815 1.1798202643686897 1.2164152651897837 0.9467374458469805 1.0964074061649174 1.0 17.88007226084486 -7.258937847511876 24.994331982514048 1.0161793199350766 1.1571005588833183 0.3085103572485046 0.09989079986342381 295.55272483525283 2953082.8542183144 0.05162268062484289 0.02805811736423362 5.50886528902696e-08 7.258937847511876 0.1409212389482417 LLTDDGNKWLYK ddPTM_KYSE-520_SHP099_60min_R1 2 LLTDDGNKWLYK 12 1 Q13200;Q13200-3;Q13200-2 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 ; 137.84 4.3781999999999995e-05 1048950000.0 1535140.0 1531330.0 1053160.0 759300.0 1376830.0 1334310.0 799140.0 789270.0 1229840.0 1020830.0 False True 1449982.7239742803 1457762.6082268099 1121048.3787155782 831463.6437081301 1485178.6879089077 1325982.0763528368 879924.8700548093 786532.2065870027 1006532.0577434694 1011786.2403937217 1.4330919576550487 1.4407812144782113 1.10798934988416 0.8217779709917564 1.467877925806712 1.3105357865282399 0.8696746752677714 0.7773699376272752 0.9948070230247371 1.0 19.948473094041848 -1.0000000095005024 0.2540077062164278 0.9078417762724217 4.586309255034786 0.36371983419165343 0.20452231129747198 59.313444724657444 0.8113988639378069 0.28425440072291164 93.73640765771098 0.0999999978124285 1.0000000095005024 3.6784674787623644 LLTHHKDHFTK ddPTM_KYSE-520_SHP099_60min_R1 2 LLTHHKDHFTK 11 1 P78371-2;P78371;F8VQ14;F5GWF6 P78371-2 CCT2 T-complex protein 1 subunit beta 0 ; 215.72 3.8917e-09 1525150000.0 1739380.0 1617390.0 1364480.0 1336660.0 932540.0 867570.0 900520.0 770370.0 1622910.0 599010.0 False True 1642893.1240319351 1539688.156648116 1452436.5640451908 1463695.7645185157 1005925.59257321 862155.1738212479 991553.3498282627 767697.7662757096 1328230.4542318135 593703.2374227276 2.7671958319845995 2.5933632488377856 2.4464016237307953 2.4653659812812125 1.694323913307167 1.4521651887294285 1.6701161242317069 1.2930664983541174 2.237195909521526 1.0 19.179382454481207 -5.7624572680621515 3.193414501370067 1.5551752652778772 2.5870051029255934 0.7297438655615742 0.303147062964798 0.1262377261720015 2.6709441118894466 0.09148632494844834 0.11365178713516906 1.7279959964486237e-06 5.7624572680621515 1.0318298376477162 LLVDSQGLSGCS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 LLVDSQGLSGCSPR 14 0 O94885;A0A087WW74 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 LLVDSQGLSGCS(1)PR;LLVDSQGLSGCS(1)PR;LLVDSQGLSGCS(1)PR 255.23 1.9323e-19 1395680000.0 1559110.0 1476760.0 1284400.0 1107570.0 1220420.0 1247570.0 1140360.0 1268890.0 1590360.0 1260150.0 True False 1472623.0602912693 1405814.2329380475 1367194.4791126603 1212833.1197969373 1316460.1107600704 1239783.4528674048 1255638.7176410938 1264488.516751153 1301590.7137130855 1248986.0513818641 1.179054849060945 1.1255643979231558 1.0946435131121053 0.9710541750687066 1.054023068795327 0.9926319445246985 1.0053264536076036 1.0124120404324268 1.0421178941694507 1.0 20.25232593440889 -4.9058843376598 2.0609695793863327 1.012254594864984 1.1644958986954526 0.8326442008911249 0.02581328441736748 0.11891464773945536 0.9876042416205811 0.006975477056013725 0.020862125387633795 1.2419830314281798e-05 4.9058843376598 0.15224130383046863 LLVDVDESTLS(ph)PEEQK ddPTM_KYSE-520_SHP099_60min_R1 1 LLVDVDESTLSPEEQK 16 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LLVDVDES(0.035)T(0.035)LS(0.93)PEEQK 99.74700000000001 0.0011595000000000002 75095000.0 138870.0 119360.0 140530.0 125830.0 134520.0 137890.0 120500.0 137180.0 180900.0 147730.0 True False 131166.6042695181 113625.7664369873 149588.78865594996 137788.84536783115 145105.95868589863 137029.37736230143 132681.31596666985 136704.15459805256 148053.12011789635 146421.22713220076 0.8958168623398467 0.7760197661394881 1.021633212518355 0.9410441919287044 0.9910172283618781 0.9358573210056516 0.9061617537658975 0.9336361760895853 1.0111451940245124 1.0 17.159765195124365 -4.761445597047591 24.999999999998796 0.9617572113237544 0.8359183119489484 0.572544912338519 0.04527709545616798 0.11014176075803628 441117.5181120558 0.011412445610868948 0.026507491272549342 1.732025983600132e-05 4.761445597047591 -0.12583889937480597 LLVDVDESTLS(ph)PEEQKER ddPTM_KYSE-520_SHP099_60min_R1 1 LLVDVDESTLSPEEQKER 18 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LLVDVDES(0.064)T(0.066)LS(0.871)PEEQKER 52.483000000000004 0.045183999999999995 333580000.0 211130.0 264680.0 299830.0 237900.0 257450.0 356220.0 238020.0 279100.0 273020.0 297830.0 True False 199418.1980227793 251964.37550722068 319157.5215449622 260509.9444727571 277709.85030987684 353996.69884689985 262081.3844513424 278131.86724242975 223446.45027411843 295191.4579082337 0.6755554494560359 0.8535625566290911 1.0811882017405086 0.882511798677257 0.940778748402024 1.1992105102070636 0.8878352588807491 0.9422083864259133 0.7569543233313388 1.0 18.171291448505393 -4.406037544028477 3.456299105072668 0.962082227268649 0.6751281290707515 0.3734347263122 0.11317263892890812 0.2735157455366999 5.377521263837999 0.029053748335767952 0.15959568392065118 3.926109933715963e-05 4.406037544028477 -0.2869540981978975 LMDIS(ph)PFLPEK ddPTM_KYSE-520_SHP099_60min_R1 2 LMDISPFLPEK 11 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 LMDIS(1)PFLPEK;LMDIS(1)PFLPEK 144.57 7.8393e-05 363200000.0 723980.0 723260.0 633490.0 605290.0 579300.0 641050.0 514090.0 673010.0 779160.0 625360.0 True False 683819.3861816508 688513.5039646066 674325.7790198378 662816.5796129263 624887.6142338776 637048.9691645768 566059.234234899 670675.4853917153 637684.1850252075 619819.7969227172 1.1032551550897194 1.110828514001876 1.0879384336669013 1.069369811844797 1.0081762753244106 1.0277970667077738 0.9132642052500924 1.0820491515783885 1.0288219062882202 1.0 19.241489309493417 -5.561656937875015 1.9727803170520455 1.0090069169118459 1.103810129789997 0.5219007123375149 0.039597685508425476 0.27641925225174474 2.1741450928848254 0.01322441173915881 0.02011929808046236 2.7437406784682018e-06 5.561656937875015 0.09480321287815108 LMEDLDR ddPTM_KYSE-520_SHP099_60min_R1 4 LMEDLDR 7 0 R4GN98;P06703 R4GN98 S100A6 Protein S100;Protein S100-A6 0 ;;; 189.31 0.00071683 3614820000.0 6325400.0 7175300.0 6488300.0 3895260.0 6503300.0 7229900.0 5086900.0 5665500.0 6758600.0 6416400.0 False True 5974517.452627716 6830587.8176551275 6906546.199647052 4265464.3392473785 7015072.711284606 7184775.512304768 5601133.495359774 5645847.7028376395 5531408.610441194 6359555.687883662 0.9394551672863675 1.07406682996249 1.086010806196025 0.6707173501718079 1.1030759152954421 1.1297606098478434 0.880742896242131 0.8877739231994161 0.8697790980869515 1.0 22.600494544066763 LMFEELR ddPTM_KYSE-520_SHP099_60min_R1 2 LMFEELR 7 0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog 0 ; 107.66 0.026095999999999998 15640000.0 88696.0 95859.0 68825.0 58353.0 97311.0 93088.0 68882.0 73191.0 81970.0 78277.0 False True 83775.8560689076 91253.7897527075 73261.56962389364 63898.85157553082 104968.82207614853 92507.00326275958 75845.26478353664 72937.11750390782 67086.31429554429 77583.52667858453 1.0798150026870632 1.176200588699152 0.9442928513343298 0.8236136498441606 1.3529782232124696 1.1923536763931923 0.977594961592179 0.9401108795437207 0.8646979219373666 1.0 16.243462736832324 -6.9479935656365965 7.592328682957028 0.9329589735437477 1.0910968690814387 0.22497786077364845 0.1373055316937623 0.37951541282811185 47.02397054852502 0.06239768050138868 0.041841492536450434 1.1272141564839197e-07 6.9479935656365965 0.15813789553769098 LMGDYLLR ddPTM_KYSE-520_SHP099_60min_R1 2 LMGDYLLR 8 0 H0YEB6;O60232;E9PK41;H0YEK1 H0YEB6 SSSCA1 Sjoegren syndrome/scleroderma autoantigen 1 0 ; 101.33 0.018817 284120000.0 462010.0 540970.0 374010.0 375710.0 553800.0 547710.0 405900.0 476640.0 485390.0 453070.0 False True 436381.38430589845 514980.98918747524 398119.28303715837 411417.36543866934 597380.9093090296 544291.5387272917 446932.3332022514 474986.64708861196 397255.4116861562 449056.1522831262 0.9717746479749009 1.1468075575162902 0.886569042675419 0.9161824492258022 1.3303033624453848 1.212079014973879 0.9952704821655896 1.0577444372460947 0.8846452936150621 1.0 18.77653633266648 -7.681453369663298 7.484029151964017 0.9431913995100051 1.06846540145302 0.12110861422837815 0.13154056714843418 0.4816951887601578 37.56317735500173 0.09676178983394643 0.03583344778114259 2.08231597214614e-08 7.681453369663298 0.12527400194301486 LMHLT(ph)SEELNPNPDK ddPTM_KYSE-520_SHP099_60min_R1 1 LMHLTSEELNPNPDK 15 0 Q96RS6-3;Q96RS6-2;Q96RS6 Q96RS6-3 NUDCD1 NudC domain-containing protein 1 1 LMHLT(0.581)S(0.419)EELNPNPDK 157.54 9.8502e-07 268190000.0 186820.0 190180.0 165290.0 212530.0 185930.0 230120.0 226120.0 228860.0 242440.0 218320.0 True False 176456.72218356305 181043.46733400016 175944.85787335082 232728.78730052523 200561.63320301182 228683.73572132032 248978.41631853458 228066.1380763256 198419.007415051 216385.85465039007 0.8154725384829814 0.8366696040575673 0.8131070219798845 1.0755268068540806 0.926870351701385 1.0568331099590575 1.150622422712444 1.0539789601534124 0.9169684762233292 1.0 17.723246666333768 -5.2554358555220455 24.636326178333444 1.0304460527557608 0.8232416898549638 0.6720679486205945 0.06526878595283112 241.3985004250538 990609.9718567806 0.018688919314730337 0.03132344760354266 5.553466347156859e-06 5.2554358555220455 -0.20720436290079702 LMHNAS(ph)DS(ph)EVDQDDVVEWK ddPTM_KYSE-520_SHP099_60min_R1 13 LMHNASDSEVDQDDVVEWK 19 0 A0A2R8Y6X0;A0A669KBJ7;Q9H2P0 A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein 2 LMHNAS(1)DS(1)EVDQDDVVEWK;LMHNAS(1)DS(1)EVDQDDVVEWK;LMHNAS(1)DS(1)EVDQDDVVEWK;LMHNAS(1)DS(1)EVDQDDVVEWK;LMHNAS(1)DS(1)EVDQDDVVEWK;LMHNAS(1)DS(1)EVDQDDVVEWK;LMHNAS(1)DS(1)EVDQDDVVEWK;LMHNAS(1)DS(1)EVDQDDVVEWK;LMHNAS(1)DS(1)EVDQDDVVEWK;LMHNAS(1)DS(1)EVDQDDVVEWK;LMHNAS(1)DS(1)EVDQDDVVEWK;LMHNAS(1)DS(1)EVDQDDVVEWK;LMHNAS(1)DS(1)EVDQDDVVEWK 185.71 6.9695e-13 14370660000.0 6956580.0 6610348.0 5986220.0 6020875.0 6135124.0 6019271.0 5887478.0 6387572.0 7462440.0 6146676.0 True False 6570684.639801574 6292776.95974536 6372101.319490644 6593097.14975792 6617923.354719492 5981702.496953788 6482641.732488113 6365415.003602508 6107449.008803714 6092221.232681562 1.0785367748225076 1.0329199678416012 1.045940565209233 1.0822156481103185 1.0862907143322067 0.9818590409791917 1.0640850824182402 1.0448430482884314 1.0024995441794633 1.0 22.53853690207146 -6.24237362986157 24.919064107949087 1.0242992617173863 1.0632659536705404 0.4204057330139558 0.02686129418966906 971.3866295918732 1269610.0346158284 0.009066865862344708 0.009054725094611178 5.723034581406227e-07 6.24237362986157 0.038966691953154164 LMHNAS(ph)DSEVDQDDVVEWK ddPTM_KYSE-520_SHP099_60min_R1 8 LMHNASDSEVDQDDVVEWK 19 0 A0A2R8Y6X0;A0A669KBJ7;Q9H2P0 A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein 1 LMHNAS(0.989)DS(0.011)EVDQDDVVEWK;LMHNAS(0.998)DS(0.002)EVDQDDVVEWK;LMHNAS(0.988)DS(0.012)EVDQDDVVEWK;LMHNAS(0.989)DS(0.011)EVDQDDVVEWK;LMHNAS(0.917)DS(0.083)EVDQDDVVEWK;LMHNAS(0.98)DS(0.02)EVDQDDVVEWK;LMHNAS(0.999)DS(0.001)EVDQDDVVEWK;LMHNAS(0.999)DS(0.001)EVDQDDVVEWK 288.64 7.496799999999999e-44 7774760000.0 4039250.0 3850590.0 3467860.0 3774410.0 3756880.0 3650860.0 3556940.0 3520300.0 4531370.0 3457860.0 True False 3815184.7504547513 3665601.876546576 3691403.8043721835 4133128.791582252 4052525.0822768314 3628073.6285222434 3916510.2075891057 3508088.900944201 3708587.434541905 3427226.0505743683 1.113199040318734 1.0695535755315173 1.0770820920182786 1.2059691221387574 1.1824504781637235 1.0586035397093854 1.1427638999571499 1.02359425645597 1.0820959515992192 1.0 21.708609920588128 -7.56700607848386 1.0228092769368224 1.0116719920063817 1.1234972865732042 0.36543033219912247 0.04984638671400716 0.5887215579338226 1.1667304003683574 0.04871674220912326 0.017491345574243877 2.710153699700833e-08 7.56700607848386 0.11182529456682255 LMIEMDGTENK ddPTM_KYSE-520_SHP099_60min_R1 5 LMIEMDGTENK 11 0 P06733;A0A2R8Y6G6;K7EM90;A0A2R8YEM5;A0A2R8Y879 P06733 ENO1 Alpha-enolase;Enolase 0 ;;;; 258.52 2.0463e-19 3015370000.0 1951790.0 2672970.0 2585740.0 1511980.0 2449140.0 2601610.0 2083150.0 2154080.0 2718180.0 2587070.0 False True 1843520.3179030984 2544556.5089902314 2752420.9377302825 1655678.1246066364 2641873.384299597 2585372.386971771 2293735.1315848003 2146607.999246054 2224627.0317416443 2564150.572510001 0.7189594627036702 0.9923584583020064 1.0734240676966125 0.6457023789308609 1.0303113290704744 1.0082763526796308 0.8945399525970522 0.837161445298736 0.8675882982815619 1.0 21.290049551965396 -6.98444495678719 24.919194677171678 0.8845950155074525 0.9188211831746415 0.0 0.13421554817524656 1565.1001305258824 2507285.068417362 0.0560410108479396 0.03776984438639322 1.0364659595450921e-07 6.98444495678719 0.034226167667189 LMIWDTR ddPTM_KYSE-520_SHP099_60min_R1 2 LMIWDTR 7 0 E9PC52;Q16576;Q16576-2;Q5JP02;Q5JP01;Q09028-4;Q09028-3;Q09028-2;Q09028;H0YF10;H0YCT5;H0YDK2 E9PC52;Q09028-4 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 0 ; 128.38 0.016123 1615670000.0 3396200.0 3472500.0 2546100.0 2306000.0 3581500.0 3563000.0 2776100.0 2706900.0 2651200.0 2797800.0 False True 3207806.0158431483 3305675.8876712327 2710225.67990404 2525161.546675821 3863343.674052533 3540761.9953722563 3056735.2801250825 2697510.395695211 2169808.911313248 2773013.6686554654 1.156794159402214 1.1920878447288852 0.9773574903502481 0.9106199422017927 1.3931931593852294 1.2768642417435485 1.1023152589100593 0.9727721237678344 0.7824732116684121 1.0 21.40302329700804 -7.328447091178442 3.155438811780417 0.8900449810061698 1.1471968456717134 0.3690533882150031 0.13788363736163203 0.3015156198877681 5.863097098856996 0.0942177700597877 0.04085215476055227 4.694106177511598e-08 7.328447091178442 0.25715186466554363 LMLSTSEYS(ph)QS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 11 LMLSTSEYSQSPK 13 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 LMLS(0.005)T(0.005)S(0.024)EY(0.013)S(0.96)QS(0.994)PK;LMLSTSEYS(1)QS(1)PK;LMLSTS(0.002)EY(0.001)S(0.997)QS(1)PK;LMLSTS(0.004)EY(0.001)S(0.995)QS(1)PK;LMLSTS(0.001)EY(0.002)S(0.998)QS(1)PK;LMLS(0.01)T(0.025)S(0.113)EY(0.002)S(0.86)QS(0.99)PK;LMLS(0.002)T(0.006)S(0.025)EY(0.04)S(0.938)QS(0.989)PK;LMLSTS(0.048)EYS(0.951)QS(1)PK;LMLSTS(0.008)EYS(0.992)QS(1)PK;LMLS(0.065)T(0.066)S(0.024)EY(0.017)S(0.912)QS(0.917)PK;LMLST(0.001)S(0.005)EY(0.021)S(0.973)QS(1)PK 223.15 1.6703e-11 5923430000.0 13966770.0 13630570.0 11910200.0 12310290.0 13103330.0 12792170.0 12169410.0 13151050.0 15573410.0 12277120.0 True False 13192005.426034287 12975736.957297318 12677950.548993781 13480256.260376366 14134487.52325079 12712329.322015483 13399612.7247963 13105432.077028155 12745671.31771832 12168354.26825484 1.0841240430063726 1.0663510176679192 1.0418788169299436 1.1078126066352336 1.1615775816229525 1.0447040776236916 1.101185290089195 1.077009412128803 1.0474441355615032 1.0 23.536630725477828 -8.022579568568204 1.8980861144588597 1.0002149429175393 1.0866740471147402 0.4107586853480403 0.03237429894228799 0.3848226891071048 3.159720886616562 0.03229047955082353 0.009116747316866762 9.493370519998448e-09 8.022579568568204 0.08645910419720093 LMLSTSEYSQS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 LMLSTSEYSQSPK 13 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LMLSTSEYSQS(1)PK;LMLSTSEYSQS(1)PK;LMLSTSEYSQS(1)PK;LMLSTSEYSQS(1)PK 352.73 4.3799000000000005e-52 3701910000.0 3604430.0 3514410.0 2682410.0 2658350.0 2568240.0 3391230.0 2829800.0 3237010.0 4159910.0 3430020.0 True False 3404485.082646935 3345572.468363047 2855322.440607751 2910998.784737931 2770345.8767132964 3370064.075657103 3115863.8001865754 3225781.567833816 3404575.206797336 3399632.691315181 1.001427328118167 0.9840982165249093 0.8398914529508014 0.8562686175404975 0.8148956455768053 0.9913024087179727 0.9165295439552833 0.9488617920619804 1.00145383808515 1.0 21.696947450085982 -7.427745794320888 1.1572659551164926 1.0042509566838984 0.9062058968365728 0.2354551739428553 0.06110344576676571 0.7768125677136365 1.843381027554674 0.06015866410298328 0.02166980207345591 3.734686963403159e-08 7.427745794320888 -0.09804505984732559 LMPS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 2 LMPSPLK 7 0 Q8NI77 Q8NI77 KIF18A Kinesin-like protein KIF18A 1 LMPS(1)PLK;LMPS(1)PLK 105.52 0.0039479 758780000.0 2282600.0 2398000.0 1824990.0 1798890.0 1867950.0 2374300.0 2053300.0 2569000.0 2391000.0 2804700.0 True False 2155979.627749711 2282796.480528617 1942631.7754872409 1969855.964744002 2014947.0378183515 2359481.112998135 2260867.602276872 2560088.7386091077 1956854.672205027 2779852.5400235783 0.7755733790582374 0.8211933718287282 0.6988254763580962 0.7086188696639621 0.7248395405179517 0.8487792352389031 0.8133048676954985 0.9209440794968906 0.7039418976477181 1.0 21.40657692514378 -6.269271642829076 23.06259211486249 0.8496974691889748 0.7453216450000463 0.3363260003882329 0.07799812447134558 261.23583676751923 769220.9077317598 0.026159500512715282 0.023544752723057536 5.379332104110584e-07 6.269271642829076 -0.10437582418892855 LMPS(ph)PLKGQHTLK ddPTM_KYSE-520_SHP099_60min_R1 2 LMPSPLKGQHTLK 13 1 Q8NI77 Q8NI77 KIF18A Kinesin-like protein KIF18A 1 LMPS(1)PLKGQHTLK;LMPS(0.996)PLKGQHT(0.004)LK 151.39 3.5958999999999997e-06 6111000000.0 2542000.0 2612600.0 2314100.0 2078420.0 2158260.0 2433300.0 2120230.0 2127040.0 2650800.0 2312690.0 True False 2400990.192648634 2487086.774407448 2463270.5886909147 2275952.411900242 2328102.783180401 2418112.8721131943 2334563.5398507267 2119661.7946948702 2169481.5412300685 2292201.365845592 1.047460414440033 1.0850210681599355 1.0746309750069516 0.99291120135104 1.0156624186119725 1.0549303861971802 1.0184810002455902 0.9247275681266021 0.9464620227332199 1.0 21.12830235720001 -7.096463300979323 4.49257191051698 0.9524640109687729 1.0441338365694617 0.6231078357650064 0.03049150086607372 0.15308567366853126 5.197305545225957 0.015997656610072995 0.009055077922357897 8.008232973126936e-08 7.096463300979323 0.09166982560068881 LMPVSLSVQS(ph)PAALTAEK ddPTM_KYSE-520_SHP099_60min_R1 1 LMPVSLSVQSPAALTAEK 18 0 P54198 P54198 HIRA Protein HIRA 1 LMPVSLSVQS(1)PAALTAEK 174.59 1.1309e-08 273220000.0 250980.0 379380.0 243610.0 218130.0 220930.0 338780.0 268510.0 330760.0 360850.0 329590.0 True False 237057.63908377374 361154.01533901005 259313.4903897817 238861.00961682427 238315.93408025312 336665.5483559401 295653.6112050666 329612.67075996444 295328.73628824105 326670.08901714016 0.7256790476196169 1.105561933832456 0.7938084909150519 0.7311995118239656 0.7295309307236539 1.0305980243519495 0.9050525932588639 1.0090078089233014 0.9040580886263675 1.0 18.317474837378786 -6.269911558189475 24.971708807372018 0.9662631212467682 0.8271060921725127 0.32024250021718326 0.11062246115306086 893.6729458925267 2634089.2041450758 0.039950914036393254 0.035799404799966274 5.371411712365046e-07 6.269911558189475 -0.13915702907425542 LMS(ph)DVEDVSLENVHTR ddPTM_KYSE-520_SHP099_60min_R1 3 LMSDVEDVSLENVHTR 16 0 Q9NSI6-3;Q9NSI6-2;Q9NSI6 Q9NSI6-3 BRWD1 Bromodomain and WD repeat-containing protein 1 1 LMS(1)DVEDVSLENVHTR;LMS(1)DVEDVSLENVHTR;LMS(1)DVEDVSLENVHTR 221.79 2.9329e-18 271371000.0 256811.0 241794.0 238239.0 282626.0 292294.0 243521.0 237916.0 252220.0 308205.0 242708.0 True False 242565.18188996357 230177.853299807 253596.2671358774 309486.6900653946 315295.87487463636 242001.09510947185 261966.8711164001 251345.1076885906 252242.74121578893 240557.79594396646 1.008344713743822 0.956850524825322 1.0542009920765487 1.2865377688174524 1.3106865800685952 1.0059998020843257 1.088997636050093 1.0448429106289985 1.0485743778370178 1.0 17.87602402915709 -10.117274530101813 13.762284015992405 0.9999999958526091 1.0930359450867018 0.05407707431262365 0.11132519000196466 0.0 0.0 0.11987988172965917 0.02907514204458457 7.633530934660128e-11 10.117274530101813 0.09303594923409264 LMS(ph)VEEELKK ddPTM_KYSE-520_SHP099_60min_R1 4 LMSVEEELKK 10 1 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 LMS(1)VEEELKK;LMS(1)VEEELKK;LMS(1)VEEELKK;LMS(1)VEEELKK 172.09 2.5821999999999998e-05 1033030000.0 981510.0 1178490.0 1013100.0 1181930.0 1154190.0 1239650.0 1380800.0 1502740.0 1543420.0 1262530.0 True False 927063.6837083226 1121873.5714504465 1078406.047017312 1294260.2718397882 1245018.1865572236 1231912.8845251806 1520384.7393093603 1497527.345682151 1263173.8344519797 1251344.9664334771 0.7408538081633833 0.896534210424769 0.8617975665742538 1.0342953434564301 0.9949440162017946 0.9844710432138621 1.2150004835538575 1.1967342226583058 1.0094529233231477 1.0 20.255048130815926 -4.940648744991154 0.6429387722538211 1.1073984536204358 0.6952417925227405 0.6477637423686805 0.08028412572189568 1.0333867843738622 0.5666888681811022 0.04410615909449952 0.2795746941842083 1.1464398008352193e-05 4.940648744991154 -0.4121566610976952 LMT(ph)PKPVSIATNR ddPTM_KYSE-520_SHP099_60min_R1 1 LMTPKPVSIATNR 13 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 LMT(0.998)PKPVS(0.001)IATNR 171.15 6.4525e-06 0.0 396780.0 438040.0 375620.0 347780.0 296010.0 417440.0 336720.0 401320.0 509390.0 433730.0 True False 374769.82243868016 416995.90088855557 399833.0662132498 380832.9066361299 319304.3029334887 414834.60211849445 370758.943670515 399927.91458879167 416897.61667692184 429887.48963683436 0.8717858311142825 0.9700117145554306 0.9300876993443696 0.8858897172324196 0.7427624916538849 0.9649841228665285 0.8624557648414688 0.9303083346915904 0.9697830868004875 1.0 18.71359960080474 -7.721933495885217 2.0340038009902255 0.9976794045522132 0.8911385141159391 0.28446004377916534 0.06059018856909936 0.43687010657194014 3.3992554666967814 0.05798092763959578 0.0170620302106663 1.8969963886518882e-08 7.721933495885217 -0.10654089043627402 LMT(ph)PTLSFLAR ddPTM_KYSE-520_SHP099_60min_R1 2 LMTPTLSFLAR 11 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 LMT(0.996)PT(0.003)LSFLAR;LMT(0.983)PT(0.017)LSFLAR 116.74 0.006684600000000001 17735400.0 99622.0 130082.0 118630.0 108060.0 111204.0 103142.0 92256.0 116658.0 147309.0 97248.0 True False 94095.76906846663 123832.66546293741 126277.07961471096 118329.98991057619 119955.1221357917 102498.25251941777 101582.13681179342 116253.3406261819 120561.3989576958 96386.4583777992 0.976234324324337 1.2847516917527901 1.3101122475083753 1.2276619755730258 1.2445225621384706 1.0634092614717994 1.053904651352881 1.2061169440473878 1.2508126243744717 1.0 16.55654285169456 -6.247636669136821 24.573470552655294 1.123922000295778 1.2195763537194582 0.14981655598743704 0.10914473631896929 1279.7811670318404 2278441.8163463473 0.03683009239557964 0.036642174127447205 5.654097989698385e-07 6.247636669136821 0.09565435342368023 LMTGVIS(ph)PERR ddPTM_KYSE-520_SHP099_60min_R1 6 LMTGVISPERR 11 1 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 LMTGVIS(1)PERR;LMTGVIS(1)PERR;LMTGVIS(1)PERR;LMTGVIS(1)PERR;LMTGVIS(1)PERR;LMTGVIS(1)PERR 220.32 4.9518e-10 3126420000.0 1814310.0 1669330.0 1537010.0 1463440.0 1580220.0 1738490.0 1450180.0 1589160.0 1835720.0 1652080.0 True False 1713666.607562682 1589132.881084587 1636088.123902951 1602524.8976007204 1704574.3237781073 1727639.4390498765 1596778.346792909 1583647.574872731 1502399.522735349 1637443.8564987888 1.0465498409373704 0.9704961026770705 0.999172043309786 0.9786747137866866 1.0409971108400982 1.0550831603740878 0.9751652494560445 0.9671461825011296 0.9175273501882415 1.0 20.64301401072885 -6.984629304609324 24.542484105663306 0.9596331949107884 1.012187816514588 0.371932231521919 0.032156334044068265 210.2290344346762 335672.82896802627 0.013827039726425095 0.009318276782651042 1.0360260974155056e-07 6.984629304609324 0.052554621603799534 LMTRERNELR ddPTM_KYSE-520_SHP099_60min_R1 2 LMTRERNELR 10 2 Q8TDM6-4;Q8TDM6;Q8TDM6-2;R4GMQ2 Q8TDM6-4 DLG5 Disks large homolog 5 0 ; 61.765 0.022925 3366200000.0 6259100.0 5480100.0 4416500.0 3574700.0 7519100.0 4835400.0 3462300.0 4547800.0 5414800.0 5189200.0 False True 5911895.245793486 5216827.770202197 4701194.656649845 3914438.413227256 8110810.392173226 4805220.474999447 3812303.0727917124 4532024.743264502 4431608.815999911 5143227.72513651 1.1494523598284916 1.0143100887222982 0.9140553185451392 0.7610859604944598 1.576988386598797 0.9342811035791554 0.7412277419021976 0.88116353882507 0.8616396264822765 1.0 22.294242602200182 -6.512571284006433 24.89274853249411 0.8577688963736351 1.0724198460040946 0.1944324298068858 0.20500782800437506 823.4394343872602 1988633.3624927222 0.07677077646459422 0.06337632190159315 3.072053084798642e-07 6.512571284006433 0.2146509496304595 LMTVFY(ph)SIIT(ph)LMLNPLIY(ph)SLRQSEMK ddPTM_KYSE-520_SHP099_60min_R1 1 LMTVFYSIITLMLNPLIYSLRQSEMK 26 1 Q8NH70 Q8NH70 OR4A16 Olfactory receptor 4A16 3 LMT(0.26)VFY(0.447)S(0.315)IIT(0.503)LMLNPLIY(0.564)S(0.477)LRQS(0.435)EMK 42.59 0.056402 847540000.0 332670.0 333670.0 282760.0 402440.0 318140.0 319480.0 325830.0 317340.0 404300.0 317150.0 True False 314216.1319387964 317639.99235111894 300987.1620319965 440687.77660200215 343175.8080310125 317486.0068149112 358768.0761943573 316239.2216077126 330889.31157360657 314340.2977389667 0.9996049956016984 1.0104972052132253 0.9575201276991253 1.4019448978442988 1.0917334191621566 1.0100073363121795 1.1413365666920763 1.0060409813263038 1.0526468096953399 1.0 18.26196770877986 -9.861779090537876 13.70819361680801 1.000008438083672 1.077443457437897 0.03296131551802428 0.12032072428450741 0.0 0.0 0.11980232740688533 0.029056332358436347 1.3747410768865895e-10 9.861779090537876 0.07743501935422503 LMYEHNLQRTACNMTYGSFGGVK ddPTM_KYSE-520_SHP099_60min_R1 2 LMYEHNLQRTACNMTYGSFGGVK 23 1 F8WCG5;A0A5F9ZGY2;A0A5F9ZHP5;A0A5F9ZH74;A0A5F9ZH37;A0A5F9ZHE7;A0A5F9ZH14;A0A5F9ZGX9;Q3SYG4-5;Q3SYG4-6;Q3SYG4-2;Q3SYG4-4;Q3SYG4-7;Q3SYG4-3;Q3SYG4 F8WCG5 BBS9 Protein PTHB1 0 ; 56.055 0.049158999999999994 10069900000.0 2692400.0 3689100.0 2814300.0 6359900.0 3407200.0 3008700.0 2997500.0 2507500.0 2768400.0 2873500.0 False True 2543047.204833667 3511870.0985480095 2995714.281039212 6964342.983826345 3675327.255683867 2989921.587279402 3300516.5527808527 2498802.067754897 2265728.34568482 2848043.0255491715 0.8929103886495204 1.2330818274316049 1.051850078866546 2.445308206846156 1.2904746251068924 1.0498161581329597 1.1588717316320856 0.8773751117306479 0.7955386647460962 1.0 21.44153951066976 -6.24591389590295 4.053487317963261 0.974123994963868 1.4203375953568447 0.20837018396714113 0.3983050538286927 0.3732594589436016 14.525473146002488 0.1479346281702518 0.14031389315471637 5.67657139098167e-07 6.24591389590295 0.44621360039297664 LNAS(ph)PAAR ddPTM_KYSE-520_SHP099_60min_R1 4 LNASPAAR 8 0 Q9UGU0;Q9UGU0-2 Q9UGU0 TCF20 Transcription factor 20 1 LNAS(1)PAAR;LNAS(1)PAAR;LNAS(1)PAAR;LNAS(1)PAAR 150.86 0.00040243 2803700000.0 5349650.0 4936020.0 4747890.0 3758530.0 4662760.0 4940930.0 4322650.0 4885300.0 5643550.0 4958450.0 True False 5052894.250237122 4698886.190082925 5053946.5862925965 4115739.5611567525 5029692.684524694 4910091.823125079 4759625.646998551 4868354.034537591 4618823.582318146 4914521.990615722 1.0281557921371849 0.9561227315811074 1.0283699199928509 0.8374648783779493 1.0234347702846567 0.9990985557702047 0.9684819105677123 0.9906058094426501 0.9398317051257046 1.0 22.228619669449536 LNCFLEQDLKLDIPTGT(ph)TPQRK ddPTM_KYSE-520_SHP099_60min_R1 1 LNCFLEQDLKLDIPTGTTPQRK 22 2 P52732 P52732 KIF11 Kinesin-like protein KIF11 1 LNCFLEQDLKLDIPT(0.136)GT(0.432)T(0.432)PQRK 73.865 0.030343000000000002 2296700000.0 155760.0 213190.0 210970.0 114820.0 121100.0 148290.0 79329.0 111660.0 253980.0 99760.0 True False 147119.68230013814 202948.03239528614 224569.46376393508 125732.45827810833 130629.88103525391 147364.46710461742 87348.34949643118 111272.67752163995 207863.6343147778 98876.20401210568 1.487917985627016 2.0525467621151665 2.2712185000188767 1.2716149404634767 1.3211457937772424 1.4903936551465427 0.8834112349796205 1.12537367947516 2.102261473239087 1.0 16.593335736889298 -5.278448271140266 24.50010985639045 1.3084552306647725 1.948759642266797 0.3855637446232726 0.3607215969051281 610.8455317517783 879878.6326306626 0.1014867713590537 0.15099401596250075 5.266859447741782e-06 5.278448271140266 0.6403044116020244 LNCQVIGASVDSHFCHLAWVNTPK ddPTM_KYSE-520_SHP099_60min_R1 1 LNCQVIGASVDSHFCHLAWVNTPK 24 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 60.45399999999999 0.048722 77672000.0 153030.0 142780.0 122440.0 154510.0 129950.0 118670.0 138340.0 140590.0 157010.0 103520.0 False True 144541.12084225795 135920.6344828506 130332.67831092679 169194.5839448746 140176.32568564208 117929.33651159867 152324.75726829132 140102.32610395266 128500.9419000047 102602.89333734139 1.4087431274187423 1.3247251618525608 1.2702631872418493 1.6490235162140188 1.3662024639477315 1.1493763253231706 1.48460489089204 1.3654812408000943 1.252410509297382 1.0 16.646711889052135 -8.11444070955122 2.3750716196217994 1.0004873246706767 1.3769651158659506 0.4646491975689363 0.12363062262638709 0.4251160773284443 5.011795849825601 0.12071066457509225 0.03291759841978405 7.68350344709929e-09 8.11444070955122 0.3764777911952739 LNCS(ph)TSPEIFR ddPTM_KYSE-520_SHP099_60min_R1 2 LNCSTSPEIFR 11 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.569)T(0.285)S(0.147)PEIFR;LNCS(0.349)T(0.326)S(0.325)PEIFR 196.02 5.468399999999999e-07 1862390000.0 2996500.0 2695200.0 2367810.0 2244750.0 2326000.0 2212780.0 1974180.0 2294740.0 2644100.0 2022880.0 True False 2830278.171625342 2565718.546422321 2520442.8212299533 2458090.3650913034 2509042.9668703577 2198969.219230938 2173749.3805400836 2286780.082536342 2163998.0923368125 2004958.8569768262 1.4116390277918083 1.279686382338556 1.257104509880267 1.2260053898550969 1.25141868030829 1.0967652585882235 1.084186527307482 1.1405620991068413 1.0793229421175223 1.0 20.935141201293888 -1.0000000000000002 0.17391715283876638 0.9790596943734999 2.7041379717916922 0.901970120240072 0.03663163599527172 17.556507155278066 0.19288256006300655 0.09446456768836492 7.931522996587861 0.09999999999999995 1.0000000000000002 1.7250782774181923 LNCST(ph)SPEIFR ddPTM_KYSE-520_SHP099_60min_R1 2 LNCSTSPEIFR 11 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.02)T(0.69)S(0.289)PEIFR;LNCS(0.126)T(0.56)S(0.314)PEIFR 255.63 1.0768000000000001e-14 1298340000.0 2548100.0 2253800.0 1911370.0 1820880.0 1902530.0 1679410.0 1628150.0 1824420.0 2161600.0 1556330.0 True False 2406751.8134885835 2145524.0649772314 2034579.9685001287 1993935.8877324671 2052248.2870850668 1668928.1792444906 1792739.2912127273 1818091.5128428296 1769107.9295016266 1542542.1270064185 1.5602502980967656 1.3909014395224384 1.318978543846059 1.292629778352997 1.3304325704658875 1.0819336146646101 1.1621979457325173 1.1786332969532343 1.1468781944613078 1.0 20.556878459407674 -1.0000000000155742 0.20568458122040445 1.0226358793407564 3.557111110334309 0.8733991205982845 0.0554878981736899 17.933888405417445 0.22027928669813063 0.1005707155252588 14.7805357359114 0.0999999999964139 1.0000000000155742 2.5344752309935528 LNCSTS(ph)PEIFR ddPTM_KYSE-520_SHP099_60min_R1 2 LNCSTSPEIFR 11 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 LNCS(0.066)T(0.124)S(0.81)PEIFR;LNCS(0.261)T(0.167)S(0.572)PEIFR 190.57 8.0074e-07 1958070000.0 2785000.0 2693600.0 2398820.0 1914360.0 2212060.0 2052810.0 1870320.0 2187140.0 2503700.0 1935950.0 True False 2630510.4982401393 2564195.4128239686 2553451.7754477076 2096300.1988266762 2386136.537100274 2039997.6513387924 2059390.198164167 2179553.3218223117 2049091.1931408336 1918798.9891463066 1.3709150948690465 1.336354369232186 1.3307552223507082 1.0925064119193337 1.2435573244500668 1.0631638138638004 1.073270420618895 1.1358945539115681 1.0679029980375878 1.0 20.87177215394182 -4.884277298608273 0.4764519106281924 1.049909936059965 1.5174083872658546 0.7958212431137448 0.05831216824523389 1.200367136279177 0.3220424320541237 0.042312092225217236 0.2970301283427632 1.3053371594607847e-05 4.884277298608273 0.4674984512058895 LNDNVFAT(ph)PS(ph)PIIQQLEK ddPTM_KYSE-520_SHP099_60min_R1 1 LNDNVFATPSPIIQQLEK 18 0 Q8IX90-3;Q8IX90 Q8IX90-3 SKA3 Spindle and kinetochore-associated protein 3 2 LNDNVFAT(1)PS(1)PIIQQLEK 113.54 0.00011514 16560000.0 32977.0 28265.0 30154.0 23327.0 27076.0 27867.0 29244.0 30191.0 41810.0 27568.0 True False 31147.700071980307 26907.106973370035 32097.77508810587 25543.991066481725 29206.727158633625 27693.071716261224 32200.268913936063 30086.27446763238 34218.3579443297 27323.76896757945 1.1399488887839038 0.9847509326146112 1.1747198977634066 0.9348633820169725 1.0689128279955948 1.0135158055654754 1.1784709844437178 1.101102651809519 1.2523293541579459 1.0 14.737868878397212 -6.761447968750368 24.999999999999787 1.1414009715526592 1.050608282194686 0.1621559000616999 0.08838999582454793 0.37757644411900443 1080062.3875859198 0.03285553093321914 0.023797165151014727 1.7320165249498607e-07 6.761447968750368 -0.09079268935797313 LNDPFQPFPGNDS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 16 LNDPFQPFPGNDSPK 15 0 P42566;B1AUU8;P42566-2 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK;LNDPFQPFPGNDS(1)PK 305.64 8.068399999999999e-35 29652570000.0 13513622.0 12332752.0 9493962.0 9888021.0 11098554.0 13615296.0 11891443.0 14329975.0 14121688.0 14202736.0 True False 12763994.448922401 11740268.082081843 10105957.981396297 10827775.542898076 11971947.057665894 13530317.887326397 13093546.107739788 14280267.661366314 11557545.437984804 14076910.808601387 0.9067326363340488 0.8340088419760542 0.7179102090510706 0.7691869111141915 0.8504669256233902 0.9611709608232364 0.9301434303142181 1.014446127813829 0.8210285335418066 1.0 23.74682743212882 -6.105290115136513 3.733176972012981 0.9450287567677038 0.802873203445574 0.49540810791322876 0.06637408187537631 0.20790483930480688 5.238562754605395 0.02290203251715958 0.023267221574312102 7.84711260757871e-07 6.105290115136513 -0.1421555533221298 LNDPFQPFPGNDS(ph)PKEKDPEIFCDPFTSATTTTNK ddPTM_KYSE-520_SHP099_60min_R1 1 LNDPFQPFPGNDSPKEKDPEIFCDPFTSATTTTNK 35 2 P42566;B1AUU8;P42566-2 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 LNDPFQPFPGNDS(0.96)PKEKDPEIFCDPFT(0.025)S(0.012)AT(0.002)T(0.001)TTNK 55.778999999999996 0.028288999999999998 372750000.0 55370.0 52132.0 46870.0 41324.0 44915.0 52719.0 41190.0 53541.0 67745.0 50725.0 True False 52298.515722641525 49627.50046827269 49891.31519465151 45251.420535486344 48449.55496860797 52389.96116587986 45353.88717566087 53355.27876756336 55444.21571247587 50275.6159634528 1.0402362004009904 0.987108750777887 0.9923561201302705 0.9000669542941307 0.9636789930893683 1.0420550830041357 0.9021050524498851 1.0612555956817968 1.1028052993479047 1.0 15.617571231703646 -7.314425897486585 21.222677914770486 1.0615236021868062 0.9756957059900152 0.33671217936551245 0.05074048484324426 70.0690876585248 28063.25876807932 0.02731937455501009 0.013123879998974025 4.8481282789197365e-08 7.314425897486585 -0.08582789619679099 LNDS(ph)PTLK ddPTM_KYSE-520_SHP099_60min_R1 12 LNDSPTLK 8 0 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 LNDS(1)PTLK;LNDS(0.981)PT(0.019)LK;LNDS(0.972)PT(0.028)LK;LNDS(0.996)PT(0.004)LK;LNDS(0.999)PT(0.001)LK;LNDS(1)PTLK;LNDS(0.997)PT(0.003)LK;LNDS(0.984)PT(0.016)LK;LNDS(0.994)PT(0.006)LK;LNDS(0.99)PT(0.01)LK;LNDS(0.811)PT(0.189)LK;LNDS(0.991)PT(0.009)LK 172.1 0.00011302 21650930000.0 30964020.0 29228470.0 25909760.0 22815430.0 24648480.0 27050690.0 25124550.0 27193680.0 32423800.0 27208050.0 True False 29246384.085356448 27824290.42837206 27579944.586681772 24983801.607490856 26588175.14533307 26881856.60976601 27664384.705978382 27099351.47113265 26536455.25748283 26967007.844542608 1.084524625570394 1.0317900520803587 1.0227291342692737 0.9264580539122327 0.9859519935844049 0.9968423921827935 1.0258603722539765 1.0049076125669176 0.984034098645953 1.0 24.684692118772926 -4.510510722358612 1.8830622795448748 0.9912534878827904 1.089056771600929 0.5655393521393243 0.025389140573819136 0.39493396470440484 2.1144453873777165 0.007550987130201631 0.05710425020880162 3.086663437667788e-05 4.510510722358612 0.09780328371813851 LNDYIFSFDK ddPTM_KYSE-520_SHP099_60min_R1 2 LNDYIFSFDK 10 0 P54136-2;P54136 P54136-2 RARS Arginine--tRNA ligase, cytoplasmic 0 ; 150.94 0.001129 543430000.0 958370.0 1025150.0 743660.0 664880.0 951600.0 997000.0 828800.0 828920.0 872730.0 843840.0 False True 905207.3056367703 975900.2552184799 791597.5134980705 728069.9952965386 1026485.5061366445 990777.3531816278 912583.1923085144 826044.6699913823 714264.2317329556 836364.2340975857 1.08231230931756 1.166836427757399 0.9464746114498581 0.8705178504938179 1.2273187497600189 1.18462424956592 1.0911312979483956 0.9876613995607573 0.8540109710736582 1.0 19.673771842924186 -7.442816694538486 3.9849184622478617 0.924452986041124 1.0802985289432916 0.2605039915555456 0.10632946309147198 0.33441434216006755 9.807497405092999 0.07255153069198167 0.03070337438662339 3.607308668883448e-08 7.442816694538486 0.15584554290216757 LNECIS(ph)PVANEMNHLPAHSHDLQR ddPTM_KYSE-520_SHP099_60min_R1 12 LNECISPVANEMNHLPAHSHDLQR 24 0 P23497;P23497-3;P23497-4;P23497-2;P23497-5 P23497 SP100 Nuclear autoantigen Sp-100 1 LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(0.997)PVANEMNHLPAHS(0.003)HDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR;LNECIS(1)PVANEMNHLPAHSHDLQR 265.75 2.1940999999999998e-37 39714390000.0 3070821.0 2961803.0 2792741.0 3222742.0 2847541.0 2958154.0 2575838.0 2819509.0 3580718.0 2740515.0 True False 2900476.4376001013 2819513.5381230596 2972765.5534035866 3529030.430727288 3071626.276407989 2939691.0636144886 2836228.842796306 2809728.7813573475 2930549.8737551873 2716236.169188406 1.0678292522946358 1.0380222346297348 1.0944429601244248 1.2992354901826302 1.1308391778487257 1.0822663717392622 1.044176082687152 1.0344199128299203 1.0789009832789382 1.0 21.373177492685965 -6.513466220883603 3.101870658460091 1.0426276630840077 1.1283700329604576 0.2678439976114477 0.06739822219554908 0.41190410824306434 8.136899819546409 0.029919304003374343 0.0239334017138474 3.0657291203867e-07 6.513466220883603 0.0857423698764499 LNEQAS(ph)EEILK ddPTM_KYSE-520_SHP099_60min_R1 8 LNEQASEEILK 11 0 Q01105;A0A0C4DFV9;Q01105-3;Q01105-4;Q01105-2 Q01105;Q01105-2 SET Protein SET 1 LNEQAS(1)EEILK;LNEQAS(1)EEILK;LNEQAS(1)EEILK;LNEQAS(1)EEILK;LNEQAS(1)EEILK;LNEQAS(1)EEILK;LNEQAS(1)EEILK;LNEQAS(1)EEILK 209.79 1.4296000000000001e-09 5384090000.0 7520010.0 6421620.0 5263640.0 5634050.0 5836690.0 6827710.0 6350860.0 7439230.0 7148140.0 6946590.0 True False 7102860.05453172 6113115.736151864 5602942.656521769 6169508.418061095 6296004.296776673 6785095.729279574 6992866.907220631 7413425.047459331 5850217.965945479 6885048.61696524 1.0316354247709707 0.8878827262147024 0.8137840367191784 0.8960733266078901 0.9144458735211948 0.9854826170087783 1.0156597718118823 1.0767425852581687 0.8496988607357302 1.0 22.715035410933073 -6.233667935834619 3.627282478289508 0.9932059357542731 0.8999797772729542 0.2122369599608369 0.07284610539024577 0.3387259020660031 9.602248746536208 0.02597448644620459 0.02479139229367766 5.838913804904587e-07 6.233667935834619 -0.09322615848131888 LNEQAS(ph)EEILKVEQK ddPTM_KYSE-520_SHP099_60min_R1 5 LNEQASEEILKVEQK 15 1 Q01105;A0A0C4DFV9;Q01105-3;Q01105-4;Q01105-2 Q01105;Q01105-2 SET Protein SET 1 LNEQAS(1)EEILKVEQK;LNEQAS(1)EEILKVEQK;LNEQAS(1)EEILKVEQK;LNEQAS(1)EEILKVEQK;LNEQAS(1)EEILKVEQK 261.69 3.5753000000000003e-25 2682800000.0 1626050.0 1608550.0 1548920.0 1128166.0 1243500.0 1355720.0 1212074.0 1260580.0 1972290.0 1333870.0 True False 1535849.7650496876 1531272.8435172273 1648765.8615596248 1235386.5574445247 1341356.3754528349 1347258.4486012002 1334602.2686222848 1256207.3422015829 1614171.853384884 1322052.9495351566 1.1617157736304764 1.158253793129567 1.247125436344545 0.9344455968113045 1.0146010989381822 1.019065423268339 1.0094922968792897 0.9501944249988432 1.2209585508299337 1.0 20.33434852869778 -5.2566998940167675 24.970529440800746 1.018317725345179 1.1859538829774687 0.5032562864747662 0.076330318975959 316.30606910197525 1666489.1607816753 0.020244254624338428 0.03365607352966498 5.537326171115629e-06 5.2566998940167675 0.16763615763228978 LNES(ph)DEQHQENEGTNQLVMGIQK ddPTM_KYSE-520_SHP099_60min_R1 1 LNESDEQHQENEGTNQLVMGIQK 23 0 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 LNES(1)DEQHQENEGTNQLVMGIQK 277.45 3.0986e-38 586800000.0 190420.0 188330.0 161310.0 187070.0 209910.0 213670.0 207730.0 199420.0 217500.0 205590.0 True False 179857.02300714108 179282.34411090668 171708.30070512547 204849.07655535365 226428.72277547565 212336.40627313772 228729.37564943024 198728.2585649781 178007.4827288138 203768.63254659975 0.8826531383136689 0.8798328863001359 0.8426630662393908 1.0053023077951255 1.1112049972838374 1.042046578118831 1.1224955126354996 0.9752642302270494 0.8735764700590282 1.0 17.636572459442082 -5.323757339877161 5.525524520450088 1.0278641926885292 0.8696514405069128 0.5123842349458523 0.0668715017233223 0.17482179055858843 10.91579133379477 0.02029218201903564 0.030712604630129797 4.745070399162404e-06 5.323757339877161 -0.15821275218161646 LNFDMTAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 LNFDMTASPK 10 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 LNFDMTAS(1)PK;LNFDMTAS(1)PK;LNFDMTAS(1)PK;LNFDMTAS(1)PK;LNFDMTAS(1)PK;LNFDMTAS(1)PK 194.86 2.3883e-06 14588090000.0 24187900.0 22035900.0 19239700.0 19267700.0 20470700.0 21232000.0 19879400.0 21024100.0 25231100.0 21155700.0 True False 22846148.96961675 20977262.28743975 20479921.846608426 21098896.41495477 22081627.627649628 21099483.21238951 21889003.756247457 20951172.30416182 20649768.264271125 20968276.95688556 1.0895577646457275 1.000428520215212 0.9767098120994263 1.0062293844333412 1.0530969079172938 1.006257369443075 1.0439104653784892 0.9991842604540702 0.9848099730240427 1.0 24.321704978774868 -7.1532614638616545 0.004386660038188858 8.591186846713841e-09 2.0226261341527634 0.11821609322467241 0.031220677039734714 15526.850300858043 60.46787879212837 13899.50394002268 13977.17248970435 7.026491676533125e-08 7.1532614638616545 2.0226261255615765 LNFS(ph)HGTHEYHAETIK ddPTM_KYSE-520_SHP099_60min_R1 1 LNFSHGTHEYHAETIK 16 0 P14618;H3BUW1;H3BTJ2;H3BT25;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 LNFS(0.661)HGT(0.339)HEYHAETIK 76.186 0.021783 627420000.0 282630.0 268430.0 253640.0 287310.0 210690.0 273720.0 269210.0 252610.0 269000.0 287800.0 True False 266951.9504910632 255534.21987835554 269990.04023834853 314615.8560170988 227270.10433788304 272011.61194872134 296424.37403640803 251733.75486961743 220156.38093816527 285250.315905012 0.9358515507480027 0.8958244938927539 0.9465021603280358 1.1029465647353236 0.796739185430258 0.9535891698689682 1.0391728159737321 0.8825012307907293 0.7718006559946354 1.0 18.121868958687287 -7.497179597279714 24.391591674928254 0.8663171944982917 0.9510412024188034 0.09576477393095062 0.09206666435378184 1014.9043274123862 963272.3514497984 0.049509930697159976 0.023627052173212197 3.182881007224012e-08 7.497179597279714 0.08472400792051171 LNGDTEEGFNRLS(ph)DEFSK ddPTM_KYSE-520_SHP099_60min_R1 5 LNGDTEEGFNRLSDEFSK 18 1 Q9BQ39;A0A087WVC1 Q9BQ39 DDX50 ATP-dependent RNA helicase DDX50 1 LNGDTEEGFNRLS(1)DEFSK;LNGDTEEGFNRLS(1)DEFSK;LNGDTEEGFNRLS(1)DEFSK;LNGDTEEGFNRLS(1)DEFSK;LNGDTEEGFNRLS(1)DEFSK 269.25 3.418e-30 4140900000.0 4168894.0 3838862.0 3773429.0 3756300.0 3834457.0 3613179.0 3685431.0 3677749.0 4603600.0 3762388.0 True False 3937637.1393358493 3654437.307270664 4016670.2710398645 4113297.6226272234 4136206.950824085 3590627.8096203045 4057990.3318204135 3664991.7471120665 3767702.2873120336 3729056.169413567 1.0559339844846274 0.979989879810623 1.077127854491805 1.1030398673973534 1.1091833329704301 0.9628784460452277 1.0882084225774948 0.9828202045260221 1.0103635118761283 1.0 21.830379097388825 -7.144352321440985 1.1955633050398122 0.9962103717485921 1.0560246153163835 0.18534307873247358 0.047692660287987514 0.8976060287295095 2.317570688499627 0.040322848563875476 0.01679809606755476 7.172122167181985e-08 7.144352321440985 0.059814243567791414 LNGLYPFR ddPTM_KYSE-520_SHP099_60min_R1 2 LNGLYPFR 8 0 P05120;H7C004;H7BYS2 P05120 SERPINB2;SERPINB10 Plasminogen activator inhibitor 2 0 ; 170.06 0.00099817 1408700000.0 1367720.0 1482720.0 982250.0 1117990.0 1800940.0 1675240.0 1246170.0 1357140.0 1177460.0 1176590.0 False True 1291849.8451177762 1411487.9055919051 1045567.4066555673 1224243.4334640484 1942663.7320530969 1664784.205761276 1372145.0250471784 1352432.3980988585 963662.9453511216 1166166.3279731693 1.1077749495331841 1.2103658558253108 0.8965851453392534 1.049801734193285 1.6658547631275742 1.4275701208546459 1.1766289183053382 1.1597251315337025 0.8263512007125052 1.0 20.153342141249112 -7.643628455010393 5.027121538260165 0.9167477530114161 1.221419834751127 0.2629119422479478 0.20149999307395539 0.3112449204077781 12.031686281292512 0.16343097567076764 0.05740193528263616 2.2718075838379738e-08 7.643628455010393 0.30467208173971083 LNHNDWIK ddPTM_KYSE-520_SHP099_60min_R1 2 LNHNDWIK 8 0 E7EV59;P21283 E7EV59 ATP6V1C1 V-type proton ATPase subunit C 1 0 ; 118.26 0.0011087999999999998 370730000.0 1176250.0 1031360.0 686790.0 643130.0 999510.0 916810.0 736640.0 759630.0 775220.0 747180.0 False True 1111001.0677037584 981811.9174970782 731061.5823028527 704252.8818359141 1078165.7505660336 911087.8487165977 811106.7601135914 756995.0208289751 634459.5897058904 740560.566497244 1.500216346866334 1.3257685622405226 0.9871732514204471 0.9509727005408071 1.4558778840542625 1.2302678402469167 1.0952605320993822 1.022191911202434 0.8567288327365342 1.0 19.498258205105547 -4.565829484024313 4.265172451496074 1.0918549738313208 1.4692476396987815 0.43330148902250953 0.15914839640949124 0.19708512583112928 7.645179055529325 0.04441124863997828 0.1422243882686159 2.7175060271225483e-05 4.565829484024313 0.3773926658674607 LNHS(ph)PPQSSSR ddPTM_KYSE-520_SHP099_60min_R1 9 LNHSPPQSSSR 11 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 LNHS(0.957)PPQS(0.025)S(0.015)S(0.003)R;LNHS(0.985)PPQS(0.005)S(0.005)S(0.005)R;LNHS(1)PPQSSSR;LNHS(1)PPQSSSR;LNHS(0.949)PPQS(0.05)S(0.001)SR;LNHS(1)PPQSSSR;LNHS(1)PPQSSSR;LNHS(0.676)PPQS(0.108)S(0.108)S(0.108)R;LNHS(0.999)PPQSSSR 156.08 3.2992e-05 23980260000.0 2270080.0 2114820.0 2065959.0 2796000.0 2199026.0 2147332.0 2060089.0 2294049.0 2452108.0 2100800.0 True False 2144154.137107713 2013220.8727904651 2199134.0227912758 3061730.9993519457 2372076.8354535913 2133929.7044756403 2268342.9006511294 2286091.4794540596 2006866.9998123515 2082188.5463976655 1.0297598365034004 0.9668773158288093 1.0561646910391156 1.4704388825156869 1.1392228814040175 1.0248494105721073 1.0894032169063288 1.0979272186513371 0.9638257799872996 1.0 20.989669282839873 -7.4931195268107835 1.1884987494809274 0.9840358311841052 1.1225989365951132 0.11958770008770725 0.13103985560912 1.1636752988329546 2.9476385094725606 0.13152248079601167 0.045918768391400015 3.2127761945896973e-08 7.4931195268107835 0.13856310541100803 LNHVAAGLVS(ph)PSLK ddPTM_KYSE-520_SHP099_60min_R1 5 LNHVAAGLVSPSLK 14 0 Q5T757;Q05519-2;Q05519;Q5T760 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 LNHVAAGLVS(0.971)PS(0.029)LK;LNHVAAGLVS(0.901)PS(0.099)LK;LNHVAAGLVS(0.993)PS(0.007)LK;LNHVAAGLVS(1)PSLK;LNHVAAGLVS(1)PSLK 334.14 6.913400000000001e-54 26503060000.0 13531800.0 13983200.0 11722770.0 10347010.0 11057210.0 14877600.0 12997380.0 15706800.0 18233300.0 15601400.0 True False 12781164.079025466 13311426.082788879 12478438.511295177 11330386.719457999 11927349.520081079 14784743.37983448 14311282.012604786 15652316.776794693 14922592.344088664 15463183.733705545 0.8265544986810185 0.8608464021399153 0.8069773163268807 0.7327331107604206 0.7713385371010429 0.9561254418524273 0.9255068205268799 1.0122311838458524 0.9650400978914492 1.0 23.882334052293878 -6.298824266786435 6.70681776447088 0.9704365091741027 0.7997675042538603 0.8348290399748667 0.03827712681129618 0.09648809417973243 13.350051602084184 0.015052323138097042 0.01342060348412455 5.025458988991963e-07 6.298824266786435 -0.1706690049202424 LNHYVLYK ddPTM_KYSE-520_SHP099_60min_R1 1 LNHYVLYK 8 0 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 0 112.94 0.0017814 664690000.0 367380.0 301150.0 245360.0 247840.0 359380.0 393110.0 287500.0 269470.0 231200.0 253950.0 False True 347000.69904612645 286682.3019646341 261176.29818988062 271394.63908418716 387661.16140751 390656.45467325 316563.30572960654 268535.27146477083 189219.90807770944 251700.20057011014 1.3786270263597613 1.138983208258429 1.0376483514844517 1.078245621058181 1.5401702522661616 1.552070494137068 1.257699854877267 1.0668854091356648 0.7517670134911273 1.0 17.941346840563785 -7.45764137280888 3.2966934807233477 0.8786878708864226 1.2798460667568834 0.4693380491261555 0.17460807065498862 0.2494059154587418 5.220215620856648 0.13531736787357135 0.05288224174384751 3.486250802072654e-08 7.45764137280888 0.40115819587046075 LNIGYIEDLK ddPTM_KYSE-520_SHP099_60min_R1 3 LNIGYIEDLK 10 0 P05120;H7C004;H7BYS2 P05120 SERPINB2;SERPINB10 Plasminogen activator inhibitor 2 0 ;; 163.64 0.00050107 1822739000.0 901145.0 1172798.0 771477.0 672970.0 1043163.0 1218497.0 874615.0 966655.0 929822.0 1083891.0 False True 851156.6904619791 1116455.0236743125 821207.6418268428 736928.8664641922 1125253.9933144397 1210891.908244486 963029.6196198261 963301.8994239726 760989.7637051551 1074288.5689944366 0.7922980054220301 1.0392505848957743 0.7644199757198529 0.6859691964831923 1.0474410933811835 1.1271570257681451 0.8964347638188573 0.8966882150907083 0.708366248760761 1.0 20.034950142850402 -3.9787007071422815 16.056704368658842 0.904319362955936 0.5461864214848701 0.05496917457543615 0.1425722033613388 29313780.645566966 548981290.9381433 0.03731209609752969 260137301.0725055 0.00010502659672382153 3.9787007071422815 -0.3581329414710659 LNIHQKT(ph)HT(ph)GEK ddPTM_KYSE-520_SHP099_60min_R1 3 LNIHQKTHTGEK 12 1 Q9GZX5 Q9GZX5 ZNF350 Zinc finger protein 350 2 LNIHQKT(1)HT(1)GEK;LNIHQKT(1)HT(1)GEK;LNIHQKT(1)HT(1)GEK 78.069 0.01072 1810090000.0 881640.0 927600.0 980050.0 1042860.0 997050.0 808430.0 1082080.0 1111130.0 1219790.0 1101010.0 True False 832733.6716942335 883036.7036440137 1043225.5911354441 1141973.1008527067 1075512.1625615172 803384.2884981175 1191467.206483105 1107275.7493696902 998306.8844035863 1091255.9079728175 0.7630965987081523 0.8091930565438089 0.9559862022405016 1.0464759846973974 0.9855728199991632 0.7362015478024145 1.091831162404835 1.014680187552553 0.9148238072388548 1.0 20.057558033836404 -4.722518276796133 3.826995762379032 0.969302424448442 0.7744260049875596 0.3980452398355324 0.09041241242423467 0.21898671740518122 6.634001241080753 0.024300521361323567 0.0685181587663446 1.894443787137161e-05 4.722518276796133 -0.1948764194608823 LNIHQKT(ph)HTGEK ddPTM_KYSE-520_SHP099_60min_R1 1 LNIHQKTHTGEK 12 1 Q9GZX5 Q9GZX5 ZNF350 Zinc finger protein 350 1 LNIHQKT(0.994)HT(0.006)GEK 85.522 0.006187 523700000.0 251380.0 301610.0 208830.0 320600.0 243070.0 311010.0 205450.0 223090.0 241090.0 257600.0 True False 237435.4502863937 287120.2028741599 222291.5159398138 351069.7276080956 262198.22612088476 309068.87122669787 226218.89099877424 222316.15285959723 197314.13338432054 255317.86440976727 0.9299601923088564 1.1245597856535103 0.8706461510388146 1.3750300176592944 1.026948218946697 1.210525835868124 0.8860284474090258 0.8707426461267724 0.7728175771815371 1.0 17.961934960061605 -6.841870610080451 8.297665939913179 0.8697886273588652 1.0911433084658753 0.3375322756793043 0.14184300737487893 0.2927304911715385 26.748454231362658 0.05751313856624721 0.038762468172526016 1.4392273052490365e-07 6.841870610080451 0.22135468110701007 LNIT(ph)PTKK ddPTM_KYSE-520_SHP099_60min_R1 2 LNITPTKK 8 1 Q7KZ85 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 LNIT(0.909)PT(0.091)KK;LNIT(0.5)PT(0.5)KK 98.04 0.0035957999999999997 1250140000.0 2121270.0 2012640.0 1599210.0 1481610.0 1860280.0 2138240.0 1673510.0 2076730.0 2281960.0 2093300.0 True False 2003598.9244530927 1915949.7533657686 1702297.6354264703 1622421.7689377107 2006673.452454682 2124894.451020143 1842684.722683668 2069526.3083424245 1867613.5875303156 2074754.9905627586 0.965703870368633 0.9234583177679618 0.8204812824500002 0.7819823431284497 0.9671857455855015 1.024166448899002 0.8881456996442053 0.9974798555761439 0.9001610291457799 1.0 20.98450954685831 -5.828648287289989 24.999977657329026 0.9620608275463687 0.8727708326938024 0.33782339441931086 0.061688619739566464 66.4059253052102 24700.300101640958 0.01992858411099442 0.02259689495764606 1.4837191863984013e-06 5.828648287289989 -0.08928999485256628 LNKDQWEER ddPTM_KYSE-520_SHP099_60min_R1 2 LNKDQWEER 9 1 P26038 P26038 MSN Moesin 0 ; 57.347 0.051908 11413400000.0 3783200.0 3477400.0 2779900.0 2303510.0 2849600.0 2893600.0 2371900.0 2574300.0 3261300.0 2555860.0 False True 3573338.3543777703 3310340.484316185 2959096.801997266 2522434.8978244644 3073847.307993883 2875539.9690735806 2611674.799513229 2565370.3541461355 2669130.1306826663 2533217.0688289935 1.4105930353728369 1.3067733219745061 1.1681181365816156 0.9957436845277877 1.2134164678650303 1.1351336624313957 1.0309715782550382 1.01269266882526 1.0536523551519017 1.0 21.272539274762025 -1.0000000000177494 0.41260981056111906 1.0327774304384898 8.135473540303217 0.7768073424459498 0.06385131288822012 36.44530035231967 0.47427781649649076 0.047053464277997066 212.44561344218766 0.09999999999591305 1.0000000000177494 7.102696109864727 LNKHEENLK ddPTM_KYSE-520_SHP099_60min_R1 2 LNKHEENLK 9 1 P42766 P42766 RPL35 60S ribosomal protein L35 0 ; 143.03 0.00037374 2016570000.0 3865670.0 3304910.0 2352200.0 2075660.0 3343670.0 3410750.0 2366200.0 3011830.0 2991740.0 2474170.0 False True 3651233.579077905 3146137.162828952 2503826.57565307 2272930.102330064 3606797.8061201284 3389462.2440965283 2605398.587886592 3001382.664696407 2448515.4316280545 2452250.77867513 1.4889315606826092 1.282958982086125 1.0210320238967585 0.9268750659987772 1.4708111574415574 1.3821841850643606 1.0624519362143714 1.223929742747581 0.998476767922939 1.0 21.225675092663963 -1.0009435451891355 0.026113881446493577 6.467117361172339e-07 2.830769783989993 0.1966012850085257 0.17962265204823633 3760.384569482179 7.564388377447119 277.34218495729164 599.5552530776531 0.09978297652850544 1.0009435451891355 2.830769137278257 LNLAQFLNEDLS(ph) ddPTM_KYSE-520_SHP099_60min_R1 4 LNLAQFLNEDLS 12 0 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 LNLAQFLNEDLS(1);LNLAQFLNEDLS(1);LNLAQFLNEDLS(1);LNLAQFLNEDLS(1) 250.57 9.656900000000001e-16 343719000.0 680710.0 722510.0 536320.0 550020.0 618230.0 728520.0 557480.0 611310.0 747110.0 679730.0 True False 642949.6593382575 687799.53509038 570892.0453423411 602293.7354304563 666881.1837524772 723973.0364492268 613835.5188804901 609189.5082908266 611453.6571104556 673708.1210219385 0.9543445288487484 1.0209162003970895 0.8473878041968128 0.8939980336244802 0.9898666246458397 1.074609335792245 0.9111297603914459 0.9042335831825145 0.9075943098072649 1.0 19.36176416442174 LNLGTDSDS(ph)SPQK ddPTM_KYSE-520_SHP099_60min_R1 1 LNLGTDSDSSPQK 13 0 Q16512-3;Q16512;Q16512-2;K7EN76 Q16512-3 PKN1 Serine/threonine-protein kinase N1 1 LNLGTDS(0.008)DS(0.624)S(0.368)PQK 64.827 0.038298 499900000.0 1346100.0 1318500.0 1077000.0 1097100.0 1031200.0 1265200.0 1040200.0 1224400.0 1433400.0 1175000.0 True False 1271429.149616176 1255157.2808911505 1146425.1432609276 1201368.0541448568 1112349.5732745982 1257303.4174978887 1145353.5673736925 1220152.842177109 1173130.6930734788 1164590.4141361662 1.0917393224116974 1.0777671408382339 0.9844020089340056 1.0315798924345176 0.9551423056317035 1.0796099660759206 0.9834818778095966 1.0477098449089985 1.007333289741739 1.0 20.15139121828671 -4.670824883753828 6.463005873629181 1.0131534686374777 1.087462407503122 0.4346611453807028 0.03359297474534046 0.17947703367956752 10.444362219581697 0.007961727388071294 0.02144742676038253 2.133905173065494e-05 4.670824883753828 0.07430893886564438 LNLGTDSDSS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 5 LNLGTDSDSSPQK 13 0 Q16512-3;Q16512;Q16512-2;K7EN76 Q16512-3 PKN1 Serine/threonine-protein kinase N1 1 LNLGTDSDS(0.056)S(0.944)PQK;LNLGTDS(0.001)DS(0.03)S(0.969)PQK;LNLGTDSDS(0.005)S(0.995)PQK;LNLGTDSDS(0.048)S(0.952)PQK;LNLGTDSDSS(1)PQK 316.54 6.3054e-40 8624140000.0 16530800.0 15905400.0 13247500.0 11545500.0 12147700.0 15328600.0 12107300.0 14444300.0 18152600.0 14622900.0 True False 15613803.570667183 15141280.709507855 14101455.046749448 12642780.848718848 13103654.879041715 15232928.52154454 13331224.039861094 14394196.094624966 14856545.429807203 14493352.482444044 1.0773079306240811 1.0447052003909139 0.9729601942566908 0.8723158333472664 0.9041148274641299 1.0510286381288492 0.9198164507493591 0.9931584919404128 1.0250592778864034 1.0 23.788888009994665 -4.706332939229225 3.628128514145398 0.9621925801325218 1.0692192288163105 0.342160829824517 0.05254136055201992 0.24996732853631298 6.5433678700262625 0.014453313485062553 0.0423519191020075 1.96637824505949e-05 4.706332939229225 0.10702664868378864 LNLT(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 LNLTSPK 7 0 Q8IWZ3-6;H0Y4P6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LNLT(0.5)S(0.5)PK 105.52 0.018639 9963200000.0 8799400.0 8169100.0 7953100.0 6817300.0 6746300.0 7193600.0 6812600.0 7341100.0 8413800.0 6863300.0 True False 8311279.740830983 7776644.173930908 8465769.551409917 7465214.142304011 7277195.428803733 7148702.074069573 7501284.0925687635 7315635.437525621 6886066.014637674 6802496.501566594 1.2217984586860018 1.1432044356274158 1.2445092106199946 1.0974227095280087 1.069783046140166 1.0508938993828587 1.1027251672736975 1.0754339139815585 1.0122851240058461 1.0 22.697632878840462 -4.396618752596081 0.27697909681343164 1.0025661800201102 1.3838095451318584 0.7401959791834363 0.0392137868428224 4.421674131954314 0.29990832444195925 0.0527787215815117 0.5740597872259093 4.012187748198545e-05 4.396618752596081 0.38124336511174817 LNLTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 LNLTSPK 7 0 Q8IWZ3-6;H0Y4P6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LNLT(0.093)S(0.907)PK;LNLT(0.002)S(0.998)PK;LNLT(0.01)S(0.99)PK;LNLT(0.007)S(0.993)PK 143.39 0.0015651 15212450000.0 25371200.0 23104300.0 20841600.0 18842400.0 20070400.0 21294500.0 18806100.0 20911300.0 24905100.0 20548500.0 True False 23963808.95976671 21994334.747738697 22185082.883739054 20633176.030825883 21649826.295045096 21161593.1267063 20707204.117848907 20838763.58103412 20382961.64647992 20366456.27649108 1.1766312526066716 1.0799293921901707 1.0892951911986382 1.0130960315684707 1.06301390880825 1.0390414925120304 1.0167308360733895 1.0231904509125735 1.0008104193368137 1.0 24.279691640239914 -1.0000000000007492 0.44283604469888155 1.0135106306434192 4.395004347957666 0.8614836176266998 0.019292895351098845 28.75975934912708 0.3527384697323379 0.011854481257400521 87.50571700773381 0.09999999999982749 1.0000000000007492 3.381493717314247 LNLTS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 1 LNLTSPKR 8 1 Q8IWZ3-6;H0Y4P6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 LNLT(0.12)S(0.88)PKR 70.399 0.016365 0.0 330180.0 318680.0 275500.0 218240.0 265270.0 276460.0 271610.0 232150.0 340480.0 300370.0 True False 311864.2572024881 303370.13445156824 293259.1708155852 238981.4639837514 286145.2398201633 274734.5105923702 299066.98945815134 231344.72583421733 278657.414802329 297708.95548432396 1.0475474501434991 1.0190158168337076 0.9850532387865198 0.8027352203596546 0.9611576492707504 0.9228291777297122 1.0045616161314934 0.7770835293075318 0.9360061552364078 1.0 18.183543094865616 -5.014679726997401 18.20337661433301 0.9102514141208217 1.0254714436256154 0.316623775100897 0.07084110189913219 20.652300768485247 25614.99092420748 0.018534072696449057 0.03394768641371592 9.667635616073652e-06 5.014679726997401 0.11522002950479371 LNLVQR ddPTM_KYSE-520_SHP099_60min_R1 1 LNLVQR 6 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2;F5GXH2;Q9BYZ2;A0A5F9ZHM4;P07195;C9J7H8;A8MW50;A0A3B3IS95 P00338;A0A5F9ZHM4 LDHA;LDHAL6B;LDHB L-lactate dehydrogenase A chain;L-lactate dehydrogenase A-like 6B;L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 122.51 0.06009400000000001 1500500000.0 804330.0 869880.0 761580.0 573740.0 859020.0 847000.0 675580.0 857300.0 946400.0 817060.0 False True 759712.211507897 828089.6590835002 810672.6653710833 628268.0770987786 926619.9868447876 841713.5588213037 743874.2194254181 854326.2263953233 774557.6168025265 809821.4840630615 0.93812306348832 1.0225582741134291 1.0010510727669897 0.7758105822861261 1.1442274687449894 1.0393816111153686 0.9185656765898939 1.0549562381439563 0.9564547644703028 1.0 19.627244391765945 -5.785328250339696 24.999851094084207 1.0176829493277988 0.9454453227906956 0.19304043543106153 0.08344309984291577 462.7546780723894 484272.93934668816 0.02621014825136282 0.02973463147616103 1.639350244010888e-06 5.785328250339696 -0.0722376265371032 LNLYELK ddPTM_KYSE-520_SHP099_60min_R1 1 LNLYELK 7 0 P49720;A0A087WXQ8;A0A087WY10;A0A087WUL2 P49720 PSMB3 Proteasome subunit beta type-3 0 94.11399999999999 0.049458999999999996 225360000.0 207660.0 219880.0 140330.0 152470.0 210460.0 214470.0 131410.0 177730.0 183010.0 183610.0 False True 196140.6858400529 209316.63475339155 149375.89633593854 166960.70295822292 227022.00464640366 213131.41317639273 144694.20523800922 177113.49611249374 149779.99730666782 181983.35824641856 1.0777946276519652 1.1501965716555345 0.8208217376320357 0.9174503897886427 1.2474877199430485 1.1711588094104597 0.7950958078380049 0.9732400688675572 0.8230422756780591 1.0 17.473447001382215 -6.763995060856867 24.999951701596945 0.895614555049958 1.0586675415161224 0.28521034116414257 0.12878530029814397 101.41847168548586 992063.5773045328 0.055927756907828606 0.03967209706001384 1.7218881575597296e-07 6.763995060856867 0.1630529864661644 LNLYTPPETPMEPDEQVT(ph)VEEQKETSEGKTSPSPIR ddPTM_KYSE-520_SHP099_60min_R1 1 LNLYTPPETPMEPDEQVTVEEQKETSEGKTSPSPIR 36 2 A0A3B3IT19;A0A3B3ITI0;A0A3B3ISI1;Q8WYB5-3;Q8WYB5-2;Q8WYB5 A0A3B3IT19 KAT6B Histone acetyltransferase KAT6B 1 LNLYTPPETPMEPDEQVT(0.233)VEEQKET(0.191)S(0.191)EGKT(0.191)S(0.191)PS(0.001)PIR 99.415 0.00065975 126230000.0 46918.0 56816.0 44428.0 38247.0 33055.0 41080.0 38154.0 51562.0 68623.0 46020.0 True False 44315.36501128577 54086.47407744531 47291.89996731339 41881.98338062012 35656.24044277715 40823.6044821477 42010.978667156225 51383.143456661266 56162.79304505462 45612.2986030182 0.9715661426533192 1.185787073529909 1.036823431744 0.9182168990240005 0.7817242615441824 0.8950130936713276 0.921044980275919 1.1265194921191979 1.2313081069178629 1.0 15.477135255283715 -9.241210980422917 8.150615851264119 1.0000023279160488 1.0020335198925885 0.0 0.13324468900665112 0.0 0.0 0.14304411197062858 0.03469329310456361 5.738376239490544e-10 9.241210980422917 0.00203119197653967 LNNLVLFDK ddPTM_KYSE-520_SHP099_60min_R1 1 LNNLVLFDK 9 0 P62851 P62851 RPS25 40S ribosomal protein S25 0 117.01 0.0065569 0.0 144150.0 182480.0 115280.0 100710.0 175020.0 179930.0 125750.0 165150.0 163730.0 153410.0 False True 136153.7121440992 173713.38689193563 122711.13325452145 110281.44812043442 188793.07827242033 178806.99012835548 138462.0372017324 164577.13319629966 134000.75929741937 152050.9067511738 0.8954482091113746 1.1424686021518553 0.8070397992123394 0.7252929329839927 1.2416438830014598 1.1759679304048287 0.9106294737743383 1.0823817937871598 0.8812887878183265 1.0 17.214194894301222 -5.758993565667845 24.999966613897502 1.0522357231381698 0.904304116982965 0.22226758032097338 0.14226871432999413 114.59901776230956 1171365.7686733538 0.04500409961203003 0.05539056319600364 1.7418326794919955e-06 5.758993565667845 -0.14793160615520484 LNNSS(ph)PNSSGGVK ddPTM_KYSE-520_SHP099_60min_R1 2 LNNSSPNSSGGVK 13 0 O00472;H0Y8G1;O00472-2 O00472 ELL2 RNA polymerase II elongation factor ELL2 1 LNNS(0.175)S(0.684)PNS(0.12)S(0.022)GGVK;LNNS(0.004)S(0.819)PNS(0.17)S(0.007)GGVK 147.1 0.00021106 374400000.0 1499660.0 1582180.0 1357150.0 1166210.0 1282530.0 1631130.0 1275200.0 1679320.0 1882820.0 1896440.0 True False 1416470.8703019049 1506169.6978994012 1444634.0605167763 1277046.247766179 1383457.8144025106 1620949.5126330485 1404109.6607526767 1673494.8308762345 1540947.3500297263 1879639.0170079924 0.7535866501412818 0.8013079555546366 0.768569947444666 0.6794103741254425 0.7360231416161479 0.862372773689958 0.7470102759346511 0.8903277787562114 0.8198102593563975 1.0 20.84202418953683 -8.181925578911345 0.5046373192754213 1.0064545463215688 0.750087957206547 0.6731623656031434 0.050064222453727276 0.7508330542737588 0.4359534154270734 0.06500773897793706 0.02792284557489556 6.57770543843778e-09 8.181925578911345 -0.25636658911502186 LNQLESSLWEEASDEGTLGGS(ph)PTKK ddPTM_KYSE-520_SHP099_60min_R1 3 LNQLESSLWEEASDEGTLGGSPTKK 25 1 Q9UPV0-2;Q9UPV0 Q9UPV0-2 CEP164 Centrosomal protein of 164 kDa 1 LNQLESSLWEEAS(0.005)DEGT(0.271)LGGS(0.56)PT(0.165)KK;LNQLESSLWEEASDEGT(0.002)LGGS(0.759)PT(0.239)KK;LNQLESSLWEEASDEGT(0.165)LGGS(0.625)PT(0.21)KK 156.4 1.2784e-07 1031264000.0 527470.0 547240.0 403529.0 422520.0 390000.0 515900.0 484580.0 596260.0 652610.0 584960.0 True False 498210.18761462317 520949.76897601364 429541.1250092284 462676.17376472935 420690.7812035429 512680.07673661195 533566.0754450536 594191.7132281304 534112.4749593163 579777.7094919934 0.8593124217403245 0.8985336284012619 0.740872092832952 0.7980233910167579 0.7256070288941533 0.8842700716897636 0.9202942208878109 1.0248612588931139 0.9212366502108379 1.0 19.145140342117696 -6.709731314474992 2.39653927512606 0.9766456396555079 0.80624022196315 0.656173178850378 0.05542325475702291 0.18759323256384527 2.201465516431208 0.026502446506646717 0.01818579946299647 1.95105128585385e-07 6.709731314474992 -0.17040541769235784 LNQPGT(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 7 LNQPGTPTR 9 0 P36507;G5E9C7;M0R1B6 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 LNQPGT(0.909)PT(0.091)R;LNQPGT(0.999)PT(0.001)R;LNQPGT(0.971)PT(0.029)R;LNQPGT(0.992)PT(0.008)R;LNQPGT(0.733)PT(0.267)R;LNQPGT(1)PTR;LNQPGT(0.998)PT(0.002)R 181.66 7.5348e-05 71147900000.0 30249200.0 32855700.0 27343280.0 21396020.0 24333860.0 30319420.0 25914330.0 31269170.0 35603600.0 32752300.0 True False 28571216.575714756 31277262.854588833 29105871.57959487 23429491.307851993 26248796.34127598 30130185.253362212 28534003.375888404 31160704.547549173 29138883.7337177 32462140.1029038 0.8801396483763868 0.9634997186088488 0.8966097579312491 0.7217482037099637 0.8085972230440831 0.928163859740936 0.8789932914292359 0.9599091264091301 0.897626701177079 1.0 24.952254778517325 -7.59688901517705 0.842073567947856 0.985961995582474 0.861878304432835 0.2772000052486623 0.06529043083843214 0.860865563741795 1.23270840397299 0.06800203340768118 0.026582174891784407 2.529944446202129e-08 7.59688901517705 -0.12408369114963902 LNQPGTPT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 LNQPGTPTR 9 0 P36507;G5E9C7;M0R1B6 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 LNQPGT(0.166)PT(0.834)R;LNQPGT(0.203)PT(0.797)R 171.55 0.00036117 32149000000.0 3194500.0 3286600.0 2707700.0 1918420.0 2082480.0 3088700.0 2720400.0 3147400.0 3393900.0 2998000.0 True False 3017294.71692213 3128706.802712823 2882242.674473182 2100746.060005994 2246359.3283096207 3069422.277604907 2995404.580545465 3136482.404008683 2777653.3132566498 2971440.0524087055 1.0154317986244594 1.0529261057030694 0.9699817676405019 0.7069791154975816 0.7559833914497718 1.0329746599184375 1.0080649542693394 1.0555428844900272 0.9347835609219279 1.0 21.50273084478221 LNQS(ph)PSLAPVK ddPTM_KYSE-520_SHP099_60min_R1 2 LNQSPSLAPVK 11 0 A0A2R8Y6X0;A0A669KBJ7;Q9H2P0 A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein 1 LNQS(1)PSLAPVK;LNQS(0.929)PS(0.071)LAPVK 215.02 1.0971999999999999e-09 832290000.0 2042000.0 2091300.0 1546240.0 1436610.0 1615850.0 2016310.0 1694510.0 2304900.0 2170400.0 2253500.0 True False 1928726.1893739202 1990830.808894705 1645913.1044714744 1573144.9824674546 1743008.202071139 2003725.4613777834 1865807.6076239138 2296904.8398677013 1776310.0713315755 2233535.7431964716 0.8635304786363838 0.8913359971779877 0.7369092298993009 0.7043294414514655 0.7803807068592841 0.8971091989377342 0.8353605324236753 1.0283716510309975 0.7952906402963812 1.0 21.09089791154971 -6.6205243099388325 1.738426111701724 0.9267791693603431 0.7944842595319205 0.332116047609721 0.08188124399112721 0.4446210474450424 2.7393655280834466 0.04166102462285431 0.028944458286893862 2.39593863164323e-07 6.6205243099388325 -0.13229490982842262 LNQS(ph)PSLAPVKR ddPTM_KYSE-520_SHP099_60min_R1 2 LNQSPSLAPVKR 12 1 A0A2R8Y6X0;A0A669KBJ7;Q9H2P0 A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein 1 LNQS(0.798)PS(0.202)LAPVKR;LNQS(0.956)PS(0.044)LAPVKR 131.24 4.092e-05 1625130000.0 1678820.0 1478470.0 1462260.0 1195250.0 1488620.0 1301110.0 1229580.0 1291860.0 1785380.0 1346120.0 True False 1585692.5079552997 1407442.0819712875 1556519.619298723 1308846.200634983 1605765.924910813 1292989.289867752 1353877.9459443807 1287378.8391823922 1461199.9977672184 1334194.424065513 1.1885018250364365 1.054900287832546 1.1666362797078316 0.9810011022581777 1.2035471711969656 0.969116094735127 1.0147531135821184 0.964910972464968 1.0951927031104642 1.0 20.34753748636898 -6.282206235806995 24.993808409943274 1.0069739190010474 1.1103498801363023 0.3798940034319066 0.06990107640670284 892.616602265796 1074299.2300067456 0.02295730595132402 0.020267908833286937 5.221481747429797e-07 6.282206235806995 0.10337596113525493 LNQSS(ph)PDNVTDTK ddPTM_KYSE-520_SHP099_60min_R1 6 LNQSSPDNVTDTK 13 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 LNQS(0.025)S(0.975)PDNVTDTK;LNQS(0.046)S(0.954)PDNVTDTK;LNQS(0.157)S(0.842)PDNVT(0.001)DTK;LNQS(0.027)S(0.973)PDNVTDTK;LNQS(0.135)S(0.865)PDNVTDTK;LNQS(0.017)S(0.983)PDNVTDTK 264.03 1.575e-17 5340920000.0 8217530.0 8470550.0 7853090.0 6320870.0 7121290.0 7551950.0 6748550.0 8139390.0 9872200.0 8092980.0 True False 7761687.229660075 8063612.06344524 8359312.746788264 6921603.584361135 7681695.008402504 7504815.478796387 7430759.293500996 8111156.355837906 8079657.337909871 8021282.493443169 0.9676366885226528 1.0052771573668766 1.0421416716867173 0.8629048521877962 0.9576641908175839 0.9356129128890602 0.9263804509534624 1.0112044255352186 1.0072774951529784 1.0 22.93540149166621 -9.936322509850633 5.445198528156566 1.0000000527363822 0.9673377999050541 0.03519944624137039 0.049232464577919695 3.295574234048881e-08 6.4091778692396976e-09 0.04983074357811471 0.012085710909784367 1.1579171601369746e-10 9.936322509850633 -0.032662252831328065 LNS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 3 LNSPLEK 7 0 Q9BX63;Q9BX63-2 Q9BX63 BRIP1 Fanconi anemia group J protein 1 LNS(1)PLEK;LNS(1)PLEK;LNS(1)PLEK 120.76 0.0025 1027890000.0 1720700.0 1764700.0 1603730.0 1432500.0 1786710.0 2371930.0 2357330.0 2844170.0 3519140.0 2859730.0 True False 1625249.3408695918 1679921.1631312994 1707109.0018587268 1568644.3693031704 1927313.912010719 2357125.9050472425 2595631.9217237365 2834304.2381042656 2880152.8863001266 2834395.017036273 0.5734025536669904 0.5926912632269141 0.6022833767340342 0.55343181168283 0.6799736453199016 0.8316151739188149 0.9157622371344011 0.9999679723780694 1.0161437869417718 1.0 21.434609403587867 -6.443626919317208 1.2592852181065943 1.0077294814595845 0.5768334000102434 0.9875774096688459 0.02067854387993457 0.04624314418297451 0.14951966568655212 0.011734324997770058 0.00901362993139154 3.6005851060840387e-07 6.443626919317208 -0.4308960814493411 LNS(ph)PPSSIYK ddPTM_KYSE-520_SHP099_60min_R1 2 LNSPPSSIYK 10 0 C9JKH7;Q53EP0-2;Q53EP0 C9JKH7 FNDC3B Fibronectin type III domain-containing protein 3B 1 LNS(0.943)PPS(0.046)S(0.011)IYK;LNS(0.988)PPS(0.004)S(0.008)IYK 114.79 0.00060769 1306450000.0 2150100.0 2654000.0 1764220.0 2293100.0 1992890.0 2240400.0 1943350.0 2793500.0 3286100.0 1840500.0 True False 2030829.6668819143 2526497.8562647854 1877944.444051806 2511035.534554345 2149719.1050069937 2226416.8325658175 2139802.783268281 2783810.0005077994 2689427.075839796 1824194.6018873304 1.1132746828549964 1.384993604109367 1.0294649716147966 1.3765173583763497 1.178448342508454 1.2204930495147523 1.1730123425726724 1.5260488095007194 1.4743093050803282 1.0 20.79882821121841 -7.232710050473987 24.954786814674033 1.3751343723760308 1.2160973153566659 0.08644734663871656 0.16622106082596258 1167.5618773021117 1014166.085248097 0.07292602766060559 0.042092705485377586 5.8518063992912626e-08 7.232710050473987 -0.15903705701936488 LNS(ph)SENGEDR ddPTM_KYSE-520_SHP099_60min_R1 2 LNSSENGEDR 10 0 Q7L4I2;H0YGP9;E1B6W4;Q7L4I2-2 Q7L4I2 RSRC2 Arginine/serine-rich coiled-coil protein 2 1 LNS(0.5)S(0.5)ENGEDR;LNS(0.973)S(0.027)ENGEDR 158.86 6.3782e-05 1969060000.0 1809580.0 1687730.0 1577930.0 1504210.0 1581280.0 1662510.0 1586190.0 1700780.0 2134840.0 1742990.0 True False 1709198.9900917022 1606648.9174656244 1679645.8925772654 1647169.666142774 1705717.7397475338 1652133.6584132272 1746537.5649225884 1694880.3911450352 1747206.8709369216 1727548.4646256985 0.989378315624869 0.9300166972819087 0.9722713585006069 0.9534723336978336 0.9873631765908838 0.9563457652524896 1.0109919349214924 0.9810899235826988 1.0113793660286585 1.0 20.720294753856308 -6.625663430121397 0.9956622278670835 1.002148516242723 0.960484866327944 0.41270391765267855 0.019241260025736184 0.5040187264428868 1.012544459914595 0.012336697578620154 0.007932301291806282 2.3677539504542898e-07 6.625663430121397 -0.041663649914779 LNSS(ph)IVEPK ddPTM_KYSE-520_SHP099_60min_R1 4 LNSSIVEPK 9 0 Q00653-3;Q00653-4;Q00653 Q00653-3 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit 1 LNS(0.043)S(0.957)IVEPK;LNS(0.004)S(0.996)IVEPK;LNS(0.05)S(0.95)IVEPK;LNS(0.001)S(0.999)IVEPK 162.38 0.00013138 2545690000.0 6997100.0 6047100.0 6084600.0 5500800.0 4750700.0 5393000.0 5248600.0 7078000.0 6963800.0 7904400.0 True False 6608956.914626964 5756588.239117844 6476823.051704222 6023594.378124172 5124553.062214537 5359340.286568218 5779179.709399701 7053448.0700176135 5699349.46311225 7834373.165530152 0.8435846461469565 0.7347860661585293 0.82671873229132 0.7688674321293394 0.6541114335428466 0.6840802924921118 0.7376697008545704 0.900320666502271 0.727479958216488 1.0 22.901386417454287 -8.915086225145346 0.7292204775402111 1.0065329773954996 0.7545982691701522 0.4928341864649566 0.07131065719400172 3.692847200977263 2.2595433487522207 0.14690815964354584 0.026713720094671305 1.215944562153216e-09 8.915086225145346 -0.25193470822534747 LNT(ph)SDFQK ddPTM_KYSE-520_SHP099_60min_R1 10 LNTSDFQK 8 0 Q96B36;Q96B36-3;Q96B36-2 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 1 LNT(0.99)S(0.01)DFQK;LNT(0.94)S(0.06)DFQK;LNT(0.979)S(0.021)DFQK;LNT(0.775)S(0.225)DFQK;LNT(0.755)S(0.245)DFQK;LNT(0.884)S(0.116)DFQK;LNT(0.976)S(0.024)DFQK;LNT(0.898)S(0.102)DFQK;LNT(0.933)S(0.067)DFQK;LNT(0.584)S(0.416)DFQK 177.57 0.00028921 195602400000.0 109900100.0 105386100.0 98223100.0 96500700.0 97938700.0 100619200.0 100690600.0 112678000.0 126493100.0 112643400.0 True False 103803722.37258211 100323193.56823888 104554718.18851675 105672097.5140066 105645918.49502413 99991198.25000289 110869388.49355668 112287146.31724279 103525141.67155904 111645467.11123906 0.9297620858100423 0.8985872527030666 0.9364886985007875 0.946496980560072 0.9462624970681772 0.8956135957618027 0.9930487225521738 1.0057474720882702 0.9272668595529341 1.0 26.734349436959775 -6.774628083742169 24.999861853460658 0.9819947316266303 0.9267031238778103 0.5307260824747276 0.025772580745216066 191.33369547447109 362679.6986117924 0.010688944737090821 0.007254878714072738 1.6802423093232248e-07 6.774628083742169 -0.055291607748820026 LNTQEIFDDWAR ddPTM_KYSE-520_SHP099_60min_R1 1 LNTQEIFDDWAR 12 0 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 84.479 0.031016000000000002 121740000.0 74327.0 85030.0 84792.0 76226.0 80480.0 69890.0 72658.0 65421.0 94500.0 76590.0 False True 70203.93314279887 80945.03116736801 90257.82799199692 83470.49612181753 86813.31813143863 69453.7905856209 80002.97971374531 65194.06982037622 77341.18215113984 75911.47218611841 0.9248132215203797 1.0663082777384216 1.1889879802449934 1.0995768323023172 1.143612627068953 0.9149314139941236 1.0538984083669911 0.8588170923695769 1.0188339117112115 1.0 16.212030310187902 -6.262142455724714 24.9998226642694 0.9657598728877138 1.0902649954095192 0.3323262467727839 0.08148930057165246 73.83633637357937 2625423.326630496 0.02806542829567286 0.026197365322553613 5.468365620965017e-07 6.262142455724714 0.12450512252180534 LNTS(ph)DFQK ddPTM_KYSE-520_SHP099_60min_R1 1 LNTSDFQK 8 0 Q96B36;Q96B36-3;Q96B36-2 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 1 LNT(0.297)S(0.703)DFQK 134.3 0.00074779 7536000000.0 2143700.0 2161400.0 2062300.0 1877400.0 2068400.0 2073400.0 2087200.0 2256100.0 2394400.0 2206000.0 True False 2024784.6876399962 2057563.0996724565 2195239.157796668 2055827.5315391084 2231171.3124138634 2060459.1415113208 2298194.545108991 2248274.1156776985 1959637.317912053 2186456.556242032 0.9260575893262161 0.9410491572761405 1.0040168196022752 0.9402553760649871 1.0204507864764918 0.9423736939245347 1.0511046005226872 1.0282729420162435 0.8962617218794303 1.0 21.060163252425735 -4.170541976966329 0.9277799907067386 0.9894398596117033 0.8758008967331606 0.1572444396793391 0.045143736216426665 4.326561689916324 2.643670972741623 0.015140169242821591 0.5165703698339138 6.75239785176848e-05 4.170541976966329 -0.1136389628785427 LNTVAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 LNTVASPK 8 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 LNT(0.004)VAS(0.996)PK;LNT(0.003)VAS(0.997)PK;LNTVAS(1)PK;LNTVAS(1)PK;LNTVAS(1)PK 159.12 0.00023583 12087650000.0 22681980.0 19701110.0 17528400.0 15188960.0 17497740.0 18346130.0 17075840.0 19915680.0 22014690.0 19851390.0 True False 21423765.353993855 18754639.10363101 18658308.71043162 16632514.19167264 18874712.58947814 18231624.997518618 18802032.55133859 19846597.15443465 18017377.24117329 19675522.12874771 1.0888537144684869 0.9531965139684294 0.9483005629197586 0.845340422624467 0.9592991975496541 0.9266145456379311 0.9556052656852816 1.0086948150380715 0.9157254950224818 1.0 24.229898585207838 -9.704461284258091 14.064267459777394 0.9999826347953177 0.9529983212402138 0.04583454940230758 0.05941631369496309 0.0 0.0 0.057840170831903265 0.014028301984923938 1.9748709239788192e-10 9.704461284258091 -0.04698431355510391 LNVWDLSK ddPTM_KYSE-520_SHP099_60min_R1 2 LNVWDLSK 8 0 E9PC52;Q16576;Q16576-2;Q5JP02;Q5JNZ6;Q09028-4;Q09028-3;Q09028-2;Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5 E9PC52;Q09028-4 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 0 ; 138.4 0.0049976000000000005 609880000.0 1127850.0 1230570.0 773980.0 853660.0 1336880.0 1241840.0 1055590.0 1097930.0 1011730.0 1045750.0 False True 1065285.9121867665 1171451.5700767736 823871.9892117846 934791.5897377619 1442084.850193313 1234089.2159228418 1162299.3387656193 1094121.5370887895 828025.3356378054 1036485.4685811882 1.0277866352000113 1.1302151410577286 0.7948707571747788 0.9018858614750944 1.3913218215855325 1.190647870454129 1.1213850787089699 1.055607213274777 0.7988779010778249 1.0 19.983268459478385 LNWLSVDFNNWK ddPTM_KYSE-520_SHP099_60min_R1 1 LNWLSVDFNNWK 12 0 A0A087WYT3;Q15185-4;Q15185;B4DDC6 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 0 152.7 0.00027336 11971000.0 94784.0 105050.0 92932.0 87437.0 113490.0 115540.0 84146.0 95985.0 129300.0 83991.0 False True 89526.1425727804 100003.24031673523 98922.54541645721 95746.98619110732 122421.01733023091 114818.87200261309 92652.2988658208 95652.05043806753 105822.3793877501 83246.90508400918 1.075429080305562 1.201284783089729 1.188302980352589 1.1501567066605491 1.4705774011260708 1.3792569451890475 1.1129819033190496 1.149016294858525 1.2711869502050404 1.0 16.345109016863077 -9.94214226080267 0.7170365577080469 0.9605219857561593 1.2267397786800163 0.24553319542886398 0.11612141322729516 61.08704313916754 16.797732047923063 5.602544183722037 0.044982727865680056 1.142504026181533e-10 9.94214226080267 0.26621779292385694 LNY(ph)GIPAIVK ddPTM_KYSE-520_SHP099_60min_R1 1 LNYGIPAIVK 10 0 P14923 P14923 JUP Junction plakoglobin 1 LNY(1)GIPAIVK 134.91 0.0010287 32452000.0 257040.0 250020.0 218790.0 201750.0 220520.0 263430.0 249350.0 293800.0 406990.0 279710.0 True False 242781.4788034632 238008.66391232904 232893.55347637736 220924.25934165053 237873.66941283367 261785.83565560335 274556.7314214866 292780.8763734357 333090.8753829881 277231.9870110871 0.8757340068184621 0.8585180464864992 0.840067396216669 0.7968931064683213 0.858031109531818 0.9442843824696677 0.9903501193406894 1.0560862024977182 1.2014878909686098 1.0 18.08073419958841 -6.797442270596882 1.3702982631497878 1.0996650490815951 0.8425231478460851 0.8024519601657402 0.05181651302067476 0.1767812857912018 0.6674057053055856 0.032262454702593646 0.018226851776766393 1.594254785915548e-07 6.797442270596882 -0.25714190123551006 LPAKLS(ph)ISK ddPTM_KYSE-520_SHP099_60min_R1 2 LPAKLSISK 9 1 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 LPAKLS(0.5)IS(0.5)K;LPAKLS(0.999)IS(0.001)K 109.72 0.0013404000000000003 36274000000.0 24135000.0 21878000.0 22269000.0 18476700.0 17301900.0 18931900.0 19957300.0 21454800.0 21698000.0 20895000.0 True False 22796183.438070316 20826948.040452518 23704495.371659815 20232720.012777567 18663461.09565529 18813738.989668246 21974778.648478173 21380378.30638796 17758190.16206806 20709886.556064032 1.1007391748070874 1.0056524445014021 1.1445980308723098 0.9769594805845643 0.9011860613109185 0.9084423972452627 1.061076727242804 1.0323754429319945 0.8574740433268241 1.0 24.303816315044124 -5.39513257419325 7.082981491025703 0.9620474761599567 1.0753632378955598 0.4116611805105751 0.06635861435794026 0.275180029329916 14.60862862581442 0.019205338259519873 0.028551350677672643 4.025941183318209e-06 5.39513257419325 0.1133157617356031 LPAKLSIS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 LPAKLSISK 9 1 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 LPAKLS(0.071)IS(0.929)K 69.65 0.045852 1241600000.0 3456700.0 3206800.0 3176300.0 2819200.0 2768900.0 3062900.0 2889100.0 3119500.0 3645800.0 3372000.0 True False 3264949.9602393904 3052740.5144950706 3381049.3802596866 3087135.920376612 2986796.677114071 3043783.3049749327 3181158.422898807 3108679.1825967696 2983814.6231388925 3342126.7033762992 0.9769078942881061 0.9134125619507831 1.011646080576199 0.9237040346968027 0.8936814615965142 0.9107324692089104 0.9518365715115235 0.9301500088121449 0.8927891992019839 1.0 21.67233499777643 -5.407019289309933 19.70031741483904 0.9247796804555451 0.9628949292340946 0.17560987648458637 0.03691881768020909 7.178252656413986 1199.7409276281376 0.009940981779834131 0.01474485485107122 3.9172447816999254e-06 5.407019289309933 0.03811524877854944 LPALGEAHVS(ph)PEVATADK ddPTM_KYSE-520_SHP099_60min_R1 6 LPALGEAHVSPEVATADK 18 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 LPALGEAHVS(1)PEVATADK;LPALGEAHVS(1)PEVATADK;LPALGEAHVS(1)PEVATADK;LPALGEAHVS(1)PEVATADK;LPALGEAHVS(1)PEVATADK;LPALGEAHVS(1)PEVATADK 266.53 4.2308999999999995e-30 3824240000.0 4684010.0 4611660.0 3540630.0 3583660.0 3658410.0 5415350.0 4219940.0 5765320.0 5307720.0 6149850.0 True False 4424178.627957558 4390108.931357217 3768864.6750083007 3924249.968933333 3946306.053494492 5381550.791927906 4646532.7178455535 5745321.45055581 4343971.844732775 6095367.113510902 0.7258264425371506 0.7202370012506983 0.6183162728056675 0.6438086329919157 0.6474271327722275 0.8828919885726388 0.7623056382520614 0.9425718490065699 0.7126677956942069 1.0 22.539281683835267 -6.259405367471214 24.877281268475546 0.8503868349649548 0.6694004587562805 0.5656342705540423 0.08257070085981642 129.73847822181105 1586791.551106556 0.02646329750223027 0.025219883704913033 5.502938161675759e-07 6.259405367471214 -0.1809863762086743 LPAYLATS(ph)PIPTEDQFFK ddPTM_KYSE-520_SHP099_60min_R1 5 LPAYLATSPIPTEDQFFK 18 0 Q92539;J3KTK1 Q92539 LPIN2 Phosphatidate phosphatase LPIN2 1 LPAYLAT(0.012)S(0.987)PIPT(0.001)EDQFFK;LPAYLAT(0.016)S(0.983)PIPTEDQFFK;LPAYLAT(0.002)S(0.998)PIPTEDQFFK;LPAYLAT(0.017)S(0.983)PIPTEDQFFK;LPAYLATS(0.995)PIPT(0.005)EDQFFK 247.9 7.239799999999999e-24 1736380000.0 1271616.0 1289442.0 913205.0 891169.0 944898.0 1393184.0 1133584.0 1394113.0 1328867.0 1441754.0 True False 1201076.9255763495 1227495.2708280992 972071.6554796617 975865.4338202704 1019256.0968658061 1384488.6218806345 1248177.7334337058 1389277.1473914208 1087578.2508109922 1428981.181227637 0.8405127662664563 0.8590003052199461 0.6802550434181054 0.6829099267646792 0.7132746814693275 0.9688641390583052 0.8734738776345514 0.9722151457571285 0.7610864755242293 1.0 20.446555486507844 -6.257335580398082 24.992230962500333 0.9107879973060883 0.7527790773058309 0.4784009854504494 0.08342061655374375 336.6783790702726 2050382.1754812761 0.028832134876620712 0.027833408164235424 5.529226993976299e-07 6.257335580398082 -0.15800892000025735 LPCPAEGEAELELRVS(ph)EDEEKLPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 11 LPCPAEGEAELELRVSEDEEKLPASPK 27 2 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 2 LPCPAEGEAELELRVS(1)EDEEKLPAS(1)PK;LPCPAEGEAELELRVS(1)EDEEKLPAS(1)PK;LPCPAEGEAELELRVS(1)EDEEKLPAS(1)PK;LPCPAEGEAELELRVS(1)EDEEKLPAS(1)PK;LPCPAEGEAELELRVS(1)EDEEKLPAS(1)PK;LPCPAEGEAELELRVS(1)EDEEKLPAS(1)PK;LPCPAEGEAELELRVS(1)EDEEKLPAS(1)PK;LPCPAEGEAELELRVS(1)EDEEKLPAS(1)PK;LPCPAEGEAELELRVS(1)EDEEKLPAS(1)PK;LPCPAEGEAELELRVS(1)EDEEKLPAS(1)PK;LPCPAEGEAELELRVS(1)EDEEKLPAS(1)PK 162.95 2.8882999999999997e-10 3757483000.0 1912773.0 1795032.0 1710428.0 1664364.0 1585945.0 1634800.0 1573261.0 1931292.0 2403497.0 1732081.0 True False 1806667.6686715558 1708795.9683220359 1820684.9256615634 1822544.6541507186 1710749.848707312 1624596.6068017292 1732301.575427709 1924592.7988189429 1967082.532028762 1716736.109878628 1.0523851966970543 0.995374861919137 1.060550258822414 1.061633551984627 0.9965129986275297 0.9463286741936051 1.0090668947076447 1.1210766685364415 1.1458269682274191 1.0 20.711236860132587 -7.2556509341900615 24.726139718707014 1.1000888649541094 1.0163829843139882 0.30500406921160084 0.04862309606537232 430.0371600797168 1836974.7555631269 0.02406602165505086 0.013408812171205693 5.5507167464137274e-08 7.2556509341900615 -0.08370588064012119 LPCPAEGEAELELRVS(ph)EDEEKLPASPK ddPTM_KYSE-520_SHP099_60min_R1 1 LPCPAEGEAELELRVSEDEEKLPASPK 27 2 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 LPCPAEGEAELELRVS(1)EDEEKLPASPK 143.83 1.0826e-06 879710000.0 221310.0 212530.0 166640.0 165620.0 163630.0 168740.0 152030.0 156600.0 246260.0 148850.0 True False 209033.49312945266 202319.73978596603 177381.88103342723 181360.47500453124 176506.75007265533 167686.83106907495 167398.6760698159 156056.79115071485 201545.39170941475 147531.30480354754 1.4168755126771322 1.371368199145088 1.2023338454820058 1.2293016403944272 1.1964020131706383 1.1366186403107224 1.134665461630152 1.0577876428227884 1.366119495640551 1.0 17.170661588185023 -1.0000000060125127 0.3695750735272919 1.1231139296554575 5.42075312716678 0.5186429365095071 0.09102850681416347 50.147147341044025 0.6942274606395585 0.06861038862276338 152.91362007530458 0.0999999986155678 1.0000000060125127 4.297639197511322 LPDAYER ddPTM_KYSE-520_SHP099_60min_R1 4 LPDAYER 7 0 P11413;P11413-3;P11413-2 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;;; 143.85 0.011695 1395820000.0 1530200.0 1700910.0 1143070.0 889830.0 1377200.0 1597710.0 1183180.0 1200160.0 1190300.0 1374530.0 False True 1445316.7556219269 1619195.7304820393 1216754.1211766652 974399.1756628547 1485577.8048038953 1587738.0992495671 1302787.3811240208 1195996.9250794493 974171.5250211817 1362352.733568159 1.0608976075061527 1.188528998830706 0.8931270816992056 0.7152326645323277 1.0904501956060937 1.1654383333537255 0.9562775843755753 0.8778907955408842 0.7150655634313693 1.0 20.377668856436724 -7.210925513241794 3.5929381655867436 0.8438705543075884 1.0128661837054764 0.18071034596706204 0.14424632489361822 0.41883170043931867 11.05260250419713 0.08392669451542893 0.04302219474429618 6.152823920352676e-08 7.210925513241794 0.16899562939788804 LPDGPT(ph)GS(ph)SEEEEEFLEIPPFNK ddPTM_KYSE-520_SHP099_60min_R1 3 LPDGPTGSSEEEEEFLEIPPFNK 23 0 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 LPDGPT(0.684)GS(0.684)S(0.633)EEEEEFLEIPPFNK;LPDGPT(0.667)GS(0.667)S(0.667)EEEEEFLEIPPFNK;LPDGPT(0.667)GS(0.667)S(0.667)EEEEEFLEIPPFNK 84.493 3.3540999999999996e-05 27931000.0 124482.0 101213.0 95177.0 93670.0 111750.0 104463.0 100020.0 112410.0 124788.0 98241.0 True False 117576.73531128523 96350.5755561897 101312.26170858438 102572.36863708754 120544.08922947661 103811.00766841775 110130.99770113117 112020.0759466913 102129.64484948608 97370.66117034151 1.207517068263457 0.9895236860683603 1.0404803715089024 1.0534217124976288 1.237991893868269 1.066142577452662 1.1310490899149443 1.1504499877095617 1.04887492415009 1.0 16.571199517768754 -4.216337282268423 23.02207611538031 1.0885418306050776 1.207518312351147 0.2145381336790705 0.07158042732130912 21186.328466447285 10813733.801158465 0.018077765890523918 8.103144284245506 6.076628941387622e-05 4.216337282268423 0.11897648174606945 LPDGYEFK ddPTM_KYSE-520_SHP099_60min_R1 2 LPDGYEFK 8 0 P09382 P09382 LGALS1 Galectin-1 0 ; 102.51 0.017291 704840000.0 1875330.0 2079750.0 1377640.0 1247500.0 1751420.0 2012320.0 1492100.0 1532000.0 1795400.0 1786670.0 False True 1771301.7065223274 1979835.6882316058 1466444.8787019362 1366062.0249254492 1889246.7897833548 1999760.3644477993 1642936.02949268 1526685.8495714897 1469400.618350863 1770841.4938082243 1.000259883629174 1.1180197071020377 0.8281062330137307 0.7714197062254905 1.0668638590123039 1.1292712371152323 0.9277713647648489 0.862124506857091 0.8297753488884498 1.0 20.756003653051042 -6.995028415251826 24.995518294644626 0.8865595200004852 0.9826364116869829 0.10744700380925665 0.1150728402350993 315.4953500100041 1586201.105295945 0.05265790190107252 0.03536582129885505 1.0115132702630829e-07 6.995028415251826 0.09607689168649769 LPDLS(ph)PVENK ddPTM_KYSE-520_SHP099_60min_R1 12 LPDLSPVENK 10 0 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3;H7C5N8;A0A2R8YET2;A0A2R8Y7F4 E7EPN9 PRRC2C Protein PRRC2C 1 LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK;LPDLS(1)PVENK 240.8 1.2406e-13 57755180000.0 70560800.0 59987500.0 55602400.0 49802900.0 54413400.0 60395000.0 57034300.0 67015100.0 67140700.0 66466600.0 True False 66646651.76453241 57105610.4569268 59186619.670985565 54536152.64221215 58695425.01010468 60018052.40261227 62799883.645127274 66782640.25954196 54949641.3593125 65877757.63423229 1.0116715285691598 0.8668420496943693 0.8984310000289113 0.8278386302249204 0.8909748467152526 0.9110518414401051 0.9532790110101493 1.0137357836363188 0.8341152360468144 1.0 25.97328811324924 -6.639336995665277 3.748744414542772 0.9513867374938756 0.8939179256175493 0.12841594696412262 0.06246991310524902 0.44998248355115766 11.989189814941659 0.024764309164929412 0.018590236348007376 2.2943676169577536e-07 6.639336995665277 -0.05746881187632624 LPDNFRPPGEDFRS(ph)PPDDFR ddPTM_KYSE-520_SHP099_60min_R1 4 LPDNFRPPGEDFRSPPDDFR 20 2 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 LPDNFRPPGEDFRS(1)PPDDFR;LPDNFRPPGEDFRS(1)PPDDFR;LPDNFRPPGEDFRS(1)PPDDFR;LPDNFRPPGEDFRS(1)PPDDFR 113.31 6.8163e-05 871250000.0 523142.0 450684.0 436776.0 511295.0 487737.0 449214.0 473465.0 455670.0 514522.0 471824.0 True False 494122.2704022774 429032.4641495248 464931.2798263088 559888.3230735525 526119.1270560821 446410.2887985269 521327.4627731068 454089.3871241776 421097.7748441136 467644.0064335179 1.056620556672362 0.9174338989641637 0.9941991631029387 1.1972532853431286 1.1250419546024424 0.9545942696947413 1.114795561583276 0.9710150902762242 0.900466528066106 1.0 18.835051171791687 -9.61578269555089 5.9931799900401215 1.000000003580963 1.0284880631909852 0.006168664182429562 0.09203612359909759 1.4513624487605332e-10 0.0 0.0936570365183754 0.022715167891034845 2.4222407407536745e-10 9.61578269555089 0.0284880596100221 LPDS(ph)DDDEDEETAIQR ddPTM_KYSE-520_SHP099_60min_R1 3 LPDSDDDEDEETAIQR 16 0 H3BRM1;H3BRF9;Q96K21-3;Q96K21-2;Q96K21;Q96K21-4 H3BRM1 ZFYVE19 Abscission/NoCut checkpoint regulator 1 LPDS(1)DDDEDEETAIQR;LPDS(1)DDDEDEETAIQR;LPDS(1)DDDEDEETAIQR 318.32 1.8804999999999996e-60 1797430000.0 1137843.0 1056859.0 974885.0 962423.0 965409.0 1014709.0 919342.0 952619.0 1293795.0 1013396.0 True False 1074724.5805562148 1006085.9072622983 1037727.6469711512 1053891.3925569728 1041381.195874181 1008375.8247438079 1012278.06127328 949314.5870319456 1058874.44191782 1004418.0998501573 1.069997225972477 1.001660471284209 1.03316302954513 1.0492556762111278 1.0368005077064402 1.0039403161833116 1.0078253880772312 0.9451388691358387 1.0542168068016562 1.0 19.937928500984082 -6.31973967727697 3.6210597056521796 0.9981953394487278 1.036683521579796 0.26995745620952294 0.029261030560829415 0.3202025960391973 8.483663534476115 0.010301587341098052 0.009201001120660418 4.789170764881505e-07 6.31973967727697 0.038488182131068194 LPDS(ph)PALAK ddPTM_KYSE-520_SHP099_60min_R1 3 LPDSPALAK 9 0 H0YDB2;E9PNJ4;G0XQ39;Q13586 H0YDB2 STIM1 Stromal interaction molecule 1 1 LPDS(1)PALAK;LPDS(1)PALAK;LPDS(1)PALAK 121.9 0.0009484999999999999 1150110000.0 2238760.0 2726040.0 1807590.0 2103180.0 2000300.0 2622090.0 2255230.0 2774300.0 2963680.0 2170810.0 True False 2114571.5199425844 2595076.9465305414 1924110.1436462607 2303065.5948558743 2157712.2298498596 2605724.563695101 2483210.657323757 2764676.600826486 2425550.4202930173 2151578.3122646217 0.9828001648319804 1.2061271168880299 0.8942784618520616 1.0704075151379482 1.0028508920871124 1.2110758640955404 1.154134452447645 1.2849528111837836 1.1273354106920834 1.0 21.036963921188214 -6.2601424336651 24.99823828877316 1.1732239318566355 1.0355669722948944 0.26856394244017645 0.10025694961906075 144.84508297510482 2791863.0695644533 0.03230949121604304 0.03065360002532086 5.493606728879985e-07 6.2601424336651 -0.13765695956174118 LPDSSNKIEEDRCS(ph)NSADITGPSFIR ddPTM_KYSE-520_SHP099_60min_R1 6 LPDSSNKIEEDRCSNSADITGPSFIR 26 2 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 LPDSSNKIEEDRCS(0.986)NS(0.013)ADIT(0.001)GPSFIR;LPDSSNKIEEDRCS(0.995)NS(0.005)ADITGPSFIR;LPDSSNKIEEDRCS(1)NSADITGPSFIR;LPDSSNKIEEDRCS(0.993)NS(0.007)ADITGPSFIR;LPDSSNKIEEDRCS(0.945)NS(0.054)ADIT(0.001)GPSFIR;LPDSSNKIEEDRCS(1)NSADITGPSFIR 219.93 7.472699999999999e-22 10928040000.0 3810446.0 3690235.0 3841470.0 2832587.0 3172487.0 2737545.0 2038972.0 2285939.0 4775290.0 2837280.0 True False 3599072.96444422 3512950.5714443345 4089097.302769317 3101795.2168316636 3422143.6779181627 2720458.966214245 2245091.18820907 2278009.611151175 3908217.71126472 2812143.90657044 1.2798324282179008 1.2492072554453892 1.454085366405089 1.1030001734919992 1.2169162715757493 0.9673967821696544 0.7983557253110416 0.810061535552542 1.38976447902732 1.0 21.423238993031674 -5.924008206041703 1.649992586168756 0.9721786548101632 1.3037512371823765 0.3774294980332096 0.1716106672415032 0.3753956386044186 2.097358640034031 0.06587500775800448 0.07746175152607009 1.1912194995920822e-06 5.924008206041703 0.3315725823722133 LPDVKPS(ph)PINLR ddPTM_KYSE-520_SHP099_60min_R1 1 LPDVKPSPINLR 12 1 A2AJT9-3;A2AJT9-2;A2AJT9;H7BXX2 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 LPDVKPS(1)PINLR 120.77 8.081e-05 378200000.0 710850.0 593960.0 535800.0 554020.0 479030.0 619290.0 544070.0 629910.0 654400.0 670840.0 True False 671417.7334556567 565425.2700478641 570338.5253103105 606673.8942278138 516726.93569213594 615424.7813960379 599069.9052115032 627724.9892320985 535577.4560815435 664896.8795056223 1.0098073162185435 0.8503954334516964 0.857784933107793 0.9124330598135765 0.777153497962486 0.9255943295351771 0.9009967164486256 0.9440937513480847 0.8055045415159219 1.0 19.342771081273316 LPEASQS(ph)PLVLK ddPTM_KYSE-520_SHP099_60min_R1 4 LPEASQSPLVLK 12 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 LPEAS(0.067)QS(0.933)PLVLK;LPEAS(0.003)QS(0.997)PLVLK;LPEASQS(1)PLVLK;LPEAS(0.46)QS(0.54)PLVLK 213.99 1.0972e-10 4024060000.0 3075360.0 3116820.0 2528760.0 1896690.0 2055130.0 2970060.0 2122650.0 2965500.0 3287450.0 3237750.0 True False 2904763.6502218307 2967083.288757799 2691767.915759054 2076950.847339357 2216857.038909837 2951522.753852181 2337228.1770676486 2955213.3726529055 2690531.949870524 3209066.053931383 0.9051741539141098 0.924594021716339 0.8388010313659346 0.6472134921607217 0.6908106600654094 0.9197450922633116 0.728320370409435 0.9208951523551576 0.8384158832051432 1.0 21.61372205501696 -8.223668168328608 0.9456047125043194 0.9978419339692379 0.808898868228452 0.24471882739093387 0.09590838198015335 1.3402326865724306 2.4132145104235656 0.09889360811949627 0.0330617538506964 5.9749163804944e-09 8.223668168328608 -0.1889430657407859 LPEEVATPT(ph)TDEEKDSLIAIDR ddPTM_KYSE-520_SHP099_60min_R1 1 LPEEVATPTTDEEKDSLIAIDR 22 1 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 LPEEVAT(0.15)PT(0.425)T(0.425)DEEKDSLIAIDR 81.97399999999999 0.016478 414180000.0 115540.0 105570.0 101060.0 81930.0 91007.0 95122.0 104530.0 105260.0 111860.0 102100.0 True False 109130.7658767202 100498.25873619938 107574.48930171704 89716.60256684721 98168.7331410021 94528.30831428568 115096.91251448965 104894.87762786866 91549.04376112689 101195.47343259807 1.0784154881137789 0.9931102185428968 1.0630365732056954 0.886567348554415 0.970090161259911 0.9341159748340612 1.1373721433414778 1.0365570125795656 0.9046752849286658 1.0 16.62678523282479 -3.7133272066483354 1.3160844691252342 0.9910111598044196 1.2824052038345755 0.11906571890411477 0.071211709674404 12.335665182710425 6.858913281922054 0.021365633027074858 6.866516938898074 0.00019349635721427268 3.7133272066483354 0.2913940440301559 LPEEVATPTT(ph)DEEKDSLIAIDR ddPTM_KYSE-520_SHP099_60min_R1 3 LPEEVATPTTDEEKDSLIAIDR 22 1 B9ZVN9;O95602 B9ZVN9 POLR1A DNA-directed RNA polymerase;DNA-directed RNA polymerase I subunit RPA1 1 LPEEVAT(0.016)PT(0.187)T(0.797)DEEKDSLIAIDR;LPEEVAT(0.019)PT(0.15)T(0.831)DEEKDSLIAIDR;LPEEVAT(0.155)PT(0.155)T(0.689)DEEKDSLIAIDR 188.69 3.6843000000000003e-13 785190000.0 297379.0 266715.0 253216.0 198849.0 236286.0 252937.0 249807.0 250261.0 278709.0 263309.0 True False 280882.7940596606 253901.61105262337 269538.7085199251 217747.54917386826 254880.36391656453 251358.32636078406 275059.9294413765 249392.90300235632 228102.47128213785 260976.2871113023 1.0762770716401082 0.9728914985457598 1.0328091931393408 0.8343576023096778 0.9766418502530922 0.9631462273566014 1.0539652183957529 0.9556151854363464 0.8740352382469742 1.0 17.99355920069135 -3.920722671051185 1.3449321247940034 0.9582890494616455 1.223195626299831 0.2367020247273891 0.062359741027822845 4.527168345289357 3.974889151574819 0.01820002134856646 2.0353424373374467 0.00012002655162373647 3.920722671051185 0.2649065768381854 LPEGPVDS(ph)EDDEEEDEEIDRTDPLQGR ddPTM_KYSE-520_SHP099_60min_R1 5 LPEGPVDSEDDEEEDEEIDRTDPLQGR 27 1 E9PCH4;Q8TEU7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RD23;D6RIH0;D6RB02;Q8TEU7-6 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 LPEGPVDS(1)EDDEEEDEEIDRTDPLQGR;LPEGPVDS(1)EDDEEEDEEIDRTDPLQGR;LPEGPVDS(1)EDDEEEDEEIDRTDPLQGR;LPEGPVDS(1)EDDEEEDEEIDRTDPLQGR;LPEGPVDS(1)EDDEEEDEEIDRTDPLQGR 197.01 9.840400000000001e-16 4201730000.0 1085179.0 834315.0 819314.0 963709.0 808983.0 850580.0 786251.0 855656.0 1149944.0 861849.0 True False 1024981.9576192942 794233.255067654 872128.29138875 1055299.6136103238 872645.3596163731 845271.2147133684 865732.9241502916 852687.9290476121 941143.1573292096 854213.6883683765 1.199912822255401 0.9297828703549689 1.0209720392734423 1.2354047095944332 1.0215773541199074 0.9895313388479071 1.0134851922168537 0.9982138435129989 1.101765483443465 1.0 19.704237491104465 -5.9478419444769735 24.999998964624726 1.0184309624636994 1.0853720849175352 0.15448945889181598 0.08516892774603414 222.67495382507968 106729.63447763647 0.02677901899028498 0.030364543442296194 1.1276077588946417e-06 5.9478419444769735 0.06694112245383588 LPELDPRGS(ph)DEENLDSETSASTESLLEER ddPTM_KYSE-520_SHP099_60min_R1 1 LPELDPRGSDEENLDSETSASTESLLEER 29 1 M0R0P8;Q13459-2;Q13459;M0R300;M0R240;M0QXP0 M0R0P8 MYO9B Unconventional myosin-IXb 1 LPELDPRGS(0.998)DEENLDS(0.001)ETSASTESLLEER 59.358999999999995 0.028364 88624000.0 106730.0 109180.0 96982.0 79848.0 96261.0 87392.0 75261.0 86707.0 143580.0 92122.0 True False 100809.47413901972 103934.82891747887 103233.61489668633 87436.72991282337 103836.19304983117 86846.55411158365 82869.11635657708 86406.23365456604 117509.49135725558 91305.8707498315 1.1040853486324782 1.138314853841648 1.130635018853668 0.9576244024044284 1.1372345742622776 0.9511606800129434 0.9075989930990281 0.9463382030637443 1.2869872483798905 1.0 16.478420004593247 -5.238007091500051 23.340712479879528 1.0209651988502373 1.1257421043218867 0.14934697322187984 0.10615210127517548 638.6867653681643 636186.9223603791 0.028918424906510403 0.050034944761258 5.780866078782775e-06 5.238007091500051 0.10477690547164942 LPEPSVLSEVTKPPPCLENS(ph)SPPSR ddPTM_KYSE-520_SHP099_60min_R1 2 LPEPSVLSEVTKPPPCLENSSPPSR 25 1 K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-3;Q9BZL4-4;Q9BZL4 K7EL81 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 LPEPSVLSEVTKPPPCLENS(0.562)S(0.437)PPS(0.001)R;LPEPSVLSEVTKPPPCLENS(0.499)S(0.499)PPS(0.002)R 121.26 0.00013959 926450000.0 577380.0 565630.0 431990.0 446760.0 510000.0 585010.0 488830.0 596690.0 587430.0 593730.0 True False 545351.5804215053 538456.2857720606 459836.76660843793 489219.9360767084 550134.0984969398 581358.7355915585 538245.7069210556 594620.2216584934 480767.51990522834 588470.0141149509 0.9267279000472182 0.915010574637163 0.7814107016141252 0.8313421658578255 0.9348549378923449 0.9879156484564678 0.9146527333777035 1.0104511825514038 0.8169787896980523 1.0 19.166609378078064 -5.84613008555058 6.567391243846135 0.9462206455345714 0.8616599000834901 0.27578997505685765 0.06399164874555746 0.2854484830275025 18.066613001161667 0.019871475545307986 0.022669966375845882 1.4251806409585802e-06 5.84613008555058 -0.08456074545108128 LPEQPVDVPSEIADS(ph)SMTRPQELPELPK ddPTM_KYSE-520_SHP099_60min_R1 1 LPEQPVDVPSEIADSSMTRPQELPELPK 28 1 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;P18583-8 P18583-10 SON Protein SON 1 LPEQPVDVPSEIADS(0.588)S(0.405)MT(0.007)RPQELPELPK 134.38 1.8381e-06 165090000.0 91045.0 91612.0 64153.0 61133.0 65518.0 95529.0 77949.0 117160.0 91904.0 94824.0 True False 85994.55235629216 87210.82200758444 68288.40502842932 66943.06193969329 70673.89385357358 94932.76807631657 85828.84562892896 116753.59930534963 75216.55031130531 93983.93313195577 0.9149920575844989 0.9279333084000463 0.7265965868075632 0.7122819795773345 0.7519784658761374 1.0100957143709726 0.9132289186963812 1.2422719013198213 0.800312859919359 1.0 16.52012652387109 -6.269665260103361 24.25119995609872 1.0033268302401035 0.8037866139557128 0.3633217209104014 0.12299531753732958 445.2828643725204 1312759.5794448198 0.043126222897438 0.03870736628118368 5.374458823698492e-07 6.269665260103361 -0.19954021628439067 LPES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 LPESPK 6 0 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 UBTF Nucleolar transcription factor 1 1 LPES(1)PK;LPES(1)PK 93.374 0.01436 973560000.0 3497900.0 2702700.0 2552470.0 2482970.0 2986300.0 3131400.0 2907800.0 3149700.0 3281600.0 3222200.0 True False 3303864.514109223 2572858.2351645925 2717006.300296398 2718950.722267847 3221304.8202772806 3111855.7710661464 3201748.8013932165 3138774.425845507 2685744.1624040264 3193653.8148336634 1.0345092817398243 0.8056158821016722 0.8507516649665139 0.8513605042722702 1.0086581098161567 0.9743873166879932 1.002534710093484 0.9828161121492704 0.8409628338329805 1.0 21.606776505526415 -5.756394946431711 24.99308645120223 0.9693907709809411 0.8773628176062644 0.23842909680394742 0.0717657511318033 169.3563134601938 839085.2042091751 0.021185149839068114 0.026493684976983487 1.7522862518447878e-06 5.756394946431711 -0.09202795337467662 LPES(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 1 LPESPKR 7 1 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 UBTF Nucleolar transcription factor 1 1 LPES(1)PKR 73.985 0.015040000000000001 289620000.0 176200.0 154540.0 147270.0 139780.0 171430.0 160260.0 158480.0 171150.0 199880.0 176150.0 True False 166425.83475400813 147115.66643073078 156763.25984033124 153064.6491736107 184920.56569672632 159259.7578945714 174500.70501574964 170556.32059671025 163586.8305647599 174589.44804262606 0.9532410842685936 0.8426377887099594 0.897896531536416 0.8767119140913942 1.059173780374046 0.9121957809024523 0.9994917045224019 0.9768993630993603 0.9369800546297629 1.0 17.41360684144195 -5.724190892447512 24.999981691365473 0.9771405358894767 0.8894282247943165 0.48004340577934757 0.04480757960012461 141.4082036911989 94907.96368663371 0.012415033808846664 0.01602732478899037 1.8871616722083822e-06 5.724190892447512 -0.0877123110951602 LPFPIIDDR ddPTM_KYSE-520_SHP099_60min_R1 4 LPFPIIDDR 9 0 P30041 P30041 PRDX6 Peroxiredoxin-6 0 ;;; 110.31 0.0071221999999999995 618236000.0 455796.0 489220.0 483748.0 336688.0 440902.0 497417.0 432095.0 421964.0 427535.0 499526.0 False True 430512.08727320057 465717.13686580886 514931.170104167 368686.7262910617 475598.4790107798 494312.43599553243 475775.37944081496 420500.3053711384 349905.42128029146 495100.58826534724 0.869544689457063 0.9406515522381274 1.0400536422473239 0.7446703458438743 0.9606098039129872 0.998408096680765 0.9609671059122737 0.8493229766589833 0.706736024100139 1.0 18.91736213790977 -7.357133100662891 5.832515578886393 0.8306057894230499 0.9317016329253915 0.10491505613719221 0.10048725237304267 0.43350745045319433 21.43078468727242 0.055161936607205496 0.025886002261975773 4.394069272968926e-08 7.357133100662891 0.10109584350234169 LPGSGAVQAAS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 4 LPGSGAVQAASPER 14 0 Q86U90 Q86U90 YRDC YrdC domain-containing protein, mitochondrial 1 LPGSGAVQAAS(1)PER;LPGSGAVQAAS(1)PER;LPGSGAVQAAS(1)PER;LPGSGAVQAAS(1)PER 201.75 3.2225000000000004e-11 1528850000.0 533950.0 563510.0 468273.0 387992.0 447607.0 537855.0 413607.0 477770.0 580180.0 555600.0 True False 504330.7290970634 536438.1337542452 498458.62684329145 424866.643025952 482831.12436454825 534498.0474378176 455418.431975323 476112.72738235636 474833.9371476006 550677.816250259 0.9158362915928088 0.9741415359838238 0.9051728835518658 0.7715339722943708 0.8767942163573964 0.9706184481470224 0.8270143058901708 0.8645939845994883 0.8622717733227322 1.0 19.07084896592838 -4.996000882446151 24.233781626993554 0.874392616598793 0.9436560326848009 0.1289063649510258 0.06309772585828877 138.46314148303912 839012.572439997 0.01620477004636235 0.03348682176165728 1.0092508353704073e-05 4.996000882446151 0.06926341608600795 LPIGDVATQYFADR ddPTM_KYSE-520_SHP099_60min_R1 1 LPIGDVATQYFADR 14 0 Q99832-3;Q99832;Q99832-2;Q99832-4 Q99832-3 CCT7 T-complex protein 1 subunit eta 0 89.301 0.020144 323810000.0 42185.0 70180.0 77053.0 43351.0 59114.0 116230.0 98381.0 40557.0 41566.0 85483.0 False True 39844.91395628738 66808.4474576723 82019.95966915906 47471.0660060466 63765.93548734928 115504.56545667075 108326.3115860328 40416.31723307494 34018.66219359024 84725.68712476759 0.4702813905493798 0.788526475557404 0.9680648508447732 0.5602913073592476 0.7526163274833895 1.3632768216630453 1.2785533556843367 0.4770255468516603 0.4015153296248178 1.0 16.370511811553495 -6.024976108963209 24.947212046126236 0.9129213797573863 0.7144368422052116 0.09276070638498102 0.30802921099514047 2191.9484523762812 2189408.5138817313 0.11165764510529029 0.11215509853139363 9.441128115843366e-07 6.024976108963209 -0.19848453755217466 LPISDS(ph)PPDTQEIHVIEQEK ddPTM_KYSE-520_SHP099_60min_R1 4 LPISDSPPDTQEIHVIEQEK 20 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 LPIS(0.04)DS(0.948)PPDT(0.011)QEIHVIEQEK;LPIS(0.047)DS(0.952)PPDT(0.001)QEIHVIEQEK;LPISDS(1)PPDTQEIHVIEQEK;LPIS(0.004)DS(0.996)PPDTQEIHVIEQEK 241.7 1.7922e-26 640220000.0 915838.0 750870.0 572382.0 727968.0 710324.0 772182.0 805728.0 908717.0 792160.0 804275.0 True False 865034.6404622098 714797.0781211526 609278.6595635806 797153.8598484398 766222.4576092958 767362.5257116309 887178.8493874944 905564.8728231424 648323.7127285383 797149.7492164823 1.085159521548431 0.8966910907564432 0.7643214592520916 1.0000051566621724 0.9612026577972522 0.9626328383918715 1.1129387549321839 1.1360034594669588 0.8133022852554054 1.0 19.60449124276587 -6.035438861203996 1.6706269148800694 1.0217964678523337 0.9197980535942737 0.07515910089018352 0.11186621807205913 0.8002108151392686 4.5104868239808384 0.044963906859352226 0.04845267049124817 9.216396255226284e-07 6.035438861203996 -0.10199841425806 LPISSS(ph)TSNLHVDR ddPTM_KYSE-520_SHP099_60min_R1 2 LPISSSTSNLHVDR 14 0 Q86TV6;Q86TV6-2;G3V3H1 Q86TV6 TTC7B Tetratricopeptide repeat protein 7B 1 LPISS(0.005)S(0.975)T(0.021)SNLHVDR;LPISSS(0.973)T(0.026)SNLHVDR 151.95 1.4468e-06 716370000.0 265010.0 336680.0 328370.0 456770.0 287160.0 251964.0 208555.0 237660.0 299670.0 322470.0 True False 250309.3670156625 320505.3874330168 349537.2556105762 500181.2834670914 309757.85828310065 250391.3992146996 229637.77470065447 236835.61293026104 245257.48206594746 319613.1666778638 0.7831635023595501 1.0027915644540772 1.093625958040936 1.5649583171622623 0.9691648861115404 0.7834201632471155 0.7184865914241418 0.7410070598529698 0.7673572544435913 1.0 18.285967316712675 -6.002551424187801 24.99998700821219 0.7912717380586384 1.1227599031811886 0.3592038583964482 0.19445606042699787 113.66196470518841 1113728.9128450602 0.0644066127656296 0.07180555200745696 9.94142352010913e-07 6.002551424187801 0.3314881651225502 LPKS(ph)PPYTAFLGNLPYDVTEESIK ddPTM_KYSE-520_SHP099_60min_R1 2 LPKSPPYTAFLGNLPYDVTEESIK 24 1 E7EX17;P23588-2;P23588;F8VX11;F8VP89;F8W0K0;F8VSC7;F8VRU1;F8VYE9 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 LPKS(0.961)PPYT(0.039)AFLGNLPYDVTEESIK;LPKS(0.932)PPY(0.001)T(0.067)AFLGNLPYDVTEESIK 95.87799999999999 0.0019513999999999998 228956000.0 593810.0 678420.0 548260.0 375000.0 416060.0 549950.0 367900.0 512790.0 830020.0 570020.0 True False 560870.1755691124 645827.6848708189 583601.7168470153 410639.8872521393 448801.55494242505 546517.5580564056 405090.9223579903 511011.2511760853 679309.2911014719 564970.0662688493 0.9927431718164943 1.143118411805365 1.0329781198873285 0.7268347683693569 0.7943811216519501 0.9673389630457646 0.7170130712114964 0.9044926124155277 1.202381031596482 1.0 19.107814905877017 -5.024526495747171 22.84332019793735 0.8877062340512205 1.0729602130932563 0.2038647791433048 0.1390451651776583 335.3555250558212 312342.9246230344 0.03815177548704257 0.06663919714475121 9.450907319131344e-06 5.024526495747171 0.18525397904203578 LPLLPELQPQPLLPQHDS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 1 LPLLPELQPQPLLPQHDSPAK 21 0 Q8TE04 Q8TE04 PANK1 Pantothenate kinase 1 1 LPLLPELQPQPLLPQHDS(1)PAK 111.55 9.6251e-05 51960000.0 80290.0 95150.0 63433.0 58429.0 64614.0 87347.0 54333.0 78630.0 96974.0 80776.0 True False 75836.15364585319 90578.85117693819 67521.9926763886 63982.074592680605 69698.75419662993 86801.8349732754 59825.50987897985 78357.2508823799 79365.96611560455 80060.387482777 0.9472369049196452 1.1313816236078544 0.8433882822627392 0.7991726820763233 0.8705772778282378 1.084204532384366 0.747254813022855 0.9787268503944789 0.9913262802116485 1.0 16.288800977764634 -9.737266502834991 14.049839618818556 1.0000223374949444 0.9304268765206265 0.029692702085531764 0.11501823332802437 0.0 0.0 0.11287952208382211 0.027377305442402352 1.8311903758719098e-10 9.737266502834991 -0.0695954609743179 LPLLPELQPQPLLPQHDS(ph)PAKK ddPTM_KYSE-520_SHP099_60min_R1 3 LPLLPELQPQPLLPQHDSPAKK 22 1 Q8TE04 Q8TE04 PANK1 Pantothenate kinase 1 1 LPLLPELQPQPLLPQHDS(1)PAKK;LPLLPELQPQPLLPQHDS(1)PAKK;LPLLPELQPQPLLPQHDS(1)PAKK 145.87 4.7336000000000005e-07 1545145000.0 1956505.0 1881234.0 1659119.0 1339619.0 1506220.0 1913186.0 1300790.0 1503994.0 1854920.0 1884858.0 True False 1847973.7674539762 1790856.6948501975 1766068.4654242597 1466935.986988862 1624750.944780513 1901245.0965136858 1432286.5476870097 1498776.99584884 1518113.2867279586 1868159.6245173325 0.989194789996293 0.9586208112772444 0.9453520150241713 0.7852305379781812 0.8697067014283065 1.017710195404154 0.7666831725137314 0.8022745894832579 0.8126250384627525 1.0 20.833186300421406 -5.078683955165771 6.967906697692042 0.8591760717868565 0.9687638784402152 0.24442504882163496 0.08064526941139258 0.3443306167493039 26.058667420353867 0.022256050128762212 0.039070078286168396 8.342880919972655e-06 5.078683955165771 0.10958780665335865 LPLLPPES(ph)PGPLR ddPTM_KYSE-520_SHP099_60min_R1 12 LPLLPPESPGPLR 13 0 A0A0G2JNZ2;A0A669KB89;Q14160;A0A0G2JMS7;A0A0G2JPP5;Q14160-2;Q14160-3;A0A669KAX5 A0A0G2JNZ2 SCRIB Protein scribble homolog 1 LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR;LPLLPPES(1)PGPLR 194.98 1.7819999999999997e-08 4242631000.0 1932503.0 2451140.0 1810984.0 1849596.0 1945738.0 2938430.0 2250290.0 3184730.0 3889490.0 2924240.0 True False 1825303.206240777 2333383.5551638505 1927722.92631685 2025381.0477386874 2098856.510865175 2920090.168414736 2477771.273914006 3173682.914951569 3183256.6620638836 2898333.508624292 0.6297768013271757 0.8050776586685506 0.665114252925245 0.6988088298713574 0.7241597644369807 1.007506610169501 0.8548951549368424 1.095002664637436 1.098305854930695 1.0 21.466792183388954 -6.452443371448015 1.1699486046766696 1.0551151431736971 0.694241850801286 0.792218710824496 0.07786422672010572 0.20804806621907893 0.5839649389241334 0.04344177322832163 0.03290125894382109 3.528227889097752e-07 6.452443371448015 -0.36087329237241117 LPLPS(ph)PALEYTLGSR ddPTM_KYSE-520_SHP099_60min_R1 5 LPLPSPALEYTLGSR 15 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 LPLPS(0.98)PALEY(0.001)T(0.01)LGS(0.01)R;LPLPS(1)PALEYTLGSR;LPLPS(1)PALEYTLGSR;LPLPS(1)PALEYTLGSR;LPLPS(0.969)PALEY(0.001)T(0.015)LGS(0.015)R 165.36 4.3594999999999994e-08 356952000.0 212742.0 257990.0 217532.0 181010.0 190123.0 219260.0 170066.0 217991.0 282741.0 238918.0 True False 200940.7771693371 245595.77314911483 231554.46078350642 198213.13597735894 205084.5984481052 217891.5170096327 187257.9309642132 217234.84010048205 231402.36172058652 236801.3723953912 0.8485625532347968 1.03713830145815 0.9778425624868258 0.8370438649586843 0.8660616970820254 0.9201446545918476 0.7907805983976542 0.9173715418243498 0.9772002559774449 1.0 17.853317916646443 -1.0001589239532471 18.834425508243168 0.9128561475231909 6.072294037040571e-05 0.0 0.07645282407821785 0.0 0.0 0.01786387590750918 0.0 0.09996341310207181 1.0001589239532471 -0.9127954245828205 LPLQDVYK ddPTM_KYSE-520_SHP099_60min_R1 1 LPLQDVYK 8 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A0A2U3TZH3;Q05639 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 111.95 0.0080381 3333000000.0 894330.0 1025500.0 647910.0 571880.0 802980.0 1022400.0 844690.0 845630.0 774690.0 966290.0 False True 844719.7320973455 976233.4406931181 689675.3152926526 626231.3032580086 866169.9576687702 1016018.8223599773 930079.5085799692 842696.7069015268 634025.8243456777 957729.4223622433 0.8820024866875668 1.0193207161634803 0.7201149919687815 0.653870799660103 0.9043994446075998 1.0608620750670508 0.971129722929389 0.8798901727619604 0.6620093416174379 1.0 19.869258597879107 -5.969281707511009 24.983440531724376 0.9187754729752557 0.8202270536898454 0.10684764175035322 0.13346131472433376 508.0243537549713 413178.3190164373 0.044761369135684737 0.050754159273418135 1.0732929890792247e-06 5.969281707511009 -0.09854841928541036 LPLQES(ph)EEEEREER ddPTM_KYSE-520_SHP099_60min_R1 7 LPLQESEEEEREER 14 1 P23497;P23497-3;P23497-4;P23497-2;E9PHV6;P23497-7;P23497-6;P23497-5;C9JBL0 P23497 SP100 Nuclear autoantigen Sp-100 1 LPLQES(1)EEEEREER;LPLQES(1)EEEEREER;LPLQES(1)EEEEREER;LPLQES(1)EEEEREER;LPLQES(1)EEEEREER;LPLQES(1)EEEEREER;LPLQES(1)EEEEREER 181.08 6.2770000000000006e-09 4569390000.0 3505230.0 3236970.0 3073840.0 3147140.0 3230470.0 3258700.0 3072770.0 3500730.0 3757020.0 3391040.0 True False 3310787.9043972325 3081461.1024089763 3271984.6447178912 3446243.23937786 3484689.6101400205 3238361.244546612 3383395.578945263 3488586.784706523 3074839.8747669305 3360998.0237891995 0.9850609494452008 0.9168291919835548 0.9735157895240432 1.0253630662634412 1.0368020407853054 0.9635117966822466 1.0066639596326845 1.0379615697522724 0.9148591736749511 1.0 21.680458263689708 -5.001700390617738 24.740478340770306 0.9999731958493406 0.9495019171481668 0.19857474718820867 0.037940315071125635 80.09869798802295 1165515.56294533 0.009622980484184813 0.019565063252988246 9.96092360681746e-06 5.001700390617738 -0.05047127870117385 LPLS(ph)PPLVEDSAFEPSR ddPTM_KYSE-520_SHP099_60min_R1 11 LPLSPPLVEDSAFEPSR 17 0 O96007 O96007 MOCS2 Molybdopterin synthase catalytic subunit 1 LPLS(0.999)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR;LPLS(1)PPLVEDSAFEPSR 246.03 1.8265e-23 5741264000.0 893439.0 1047744.0 715015.0 666337.0 773804.0 1099534.0 811292.0 1040689.0 1090691.0 1182057.0 True False 843878.157643509 997408.8055441928 761106.0109644505 729665.4681384763 834697.9724575032 1092671.4004545724 893305.3128069018 1037079.0927576376 892649.0084826329 1171584.8946064299 0.7202876731583269 0.8513329338197485 0.6496379515204732 0.6228020449031075 0.7124519753542086 0.9326438105209893 0.7624759562191091 0.8851932945977622 0.7619157711848958 1.0 20.160030066922715 -6.238342776566378 23.465697813128276 0.8546472243258779 0.7107394389451963 0.4425389136740613 0.08750179266188784 383.7614845122327 389893.7184930218 0.02885451282857481 0.028829742271955908 5.776399522749351e-07 6.238342776566378 -0.1439077853806816 LPLS(ph)PPLVEDSAFEPSRK ddPTM_KYSE-520_SHP099_60min_R1 13 LPLSPPLVEDSAFEPSRK 18 1 O96007 O96007 MOCS2 Molybdopterin synthase catalytic subunit 1 LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK;LPLS(0.998)PPLVEDS(0.002)AFEPSRK;LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK;LPLS(1)PPLVEDSAFEPSRK;LPLS(0.829)PPLVEDS(0.171)AFEPSRK 187.07 1.3337e-12 24248810000.0 5665016.0 5667455.0 5268755.0 4192830.0 4557849.0 6030153.0 4993846.0 5584037.0 7409310.0 6295795.0 True False 5350766.269550579 5395181.954776614 5608387.377606066 4591315.302579692 4916525.785686628 5992516.57835532 5498672.688920254 5564667.278971036 6063966.077505419 6240019.154354398 0.8574919623150062 0.8646098387393184 0.8987772695685449 0.7357854501737849 0.7879023547957842 0.9603362473933487 0.8811948413785206 0.8917708650121547 0.97178645249412 1.0 22.57311902691325 -6.265550075488687 24.99127630944674 0.9305144344343993 0.829604065330499 0.5183126989470959 0.05355697041178674 347.1952409548972 2110791.831830137 0.019636644752307166 0.01793733752272964 5.42562688576537e-07 6.265550075488687 -0.10091036910390028 LPLVPES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 11 LPLVPESPR 9 0 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR;LPLVPES(1)PR 192.38 4.3276e-06 15380740000.0 4910100.0 4218590.0 3826827.0 3464051.0 3850051.0 4536961.0 3772009.0 4029688.0 4593597.0 4443339.0 True False 4637726.96495832 4015922.6041673194 4073510.391559687 3793273.365535091 4153028.109906359 4508644.143498768 4153320.480980269 4015709.952864253 3759515.579956926 4403974.473325429 1.0530776218274458 0.9118859858274582 0.9249623076229574 0.8613295532275874 0.9430182066360661 1.0237670928401872 0.9430845946398296 0.9118376996022872 0.8536642532167373 1.0 22.070374675984507 -7.238157357285992 6.286307689049948 0.9119639220003503 0.9481200245884847 0.03845145146368545 0.061083289517492215 0.5464986309890725 85.12177995092851 0.030746946360715694 0.016858713396950897 5.778866246505159e-08 7.238157357285992 0.0361561025881344 LPLVPES(ph)PRR ddPTM_KYSE-520_SHP099_60min_R1 13 LPLVPESPRR 10 1 C9J0I9;Q86WB0;Q86WB0-2;Q86WB0-3 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR;LPLVPES(1)PRR 131.69 0.00021878 78358990000.0 12769110.0 11596990.0 11973830.0 9424060.0 9988370.0 11159820.0 9949220.0 10077650.0 11790590.0 10869040.0 True False 12060782.013710294 11039853.192963136 12745682.240605382 10319719.828953052 10774397.892948793 11090167.423854956 10954984.25262996 10042692.984291181 9649716.072586317 10772748.76158516 1.1195640296298535 1.0247944547198995 1.1831411390615143 0.9579467652445794 1.0001530836186874 1.0294649647267082 1.0169163409523332 0.9322312444622023 0.8957524477871891 1.0 23.360883077392863 -5.678865581924726 0.578170860165698 0.9485272754712498 1.117686326211937 0.4523518238449372 0.05932972396113634 1.0477245820385972 0.6999226478097339 0.04347439233834242 0.09707083429896596 2.0947607029349997e-06 5.678865581924726 0.16915905074068716 LPNGLGGPNGFPKPTPEEGPPELNRQS(ph)PNSSSAAASVASR ddPTM_KYSE-520_SHP099_60min_R1 2 LPNGLGGPNGFPKPTPEEGPPELNRQSPNSSSAAASVASR 40 2 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 LPNGLGGPNGFPKPT(0.006)PEEGPPELNRQS(0.948)PNS(0.025)S(0.009)S(0.009)AAAS(0.002)VAS(0.001)R;LPNGLGGPNGFPKPTPEEGPPELNRQS(1)PNSSSAAASVASR 240.48 1.4969e-31 1098780000.0 269764.0 272641.0 212530.0 195732.0 171667.0 258366.0 176416.0 231345.0 321000.0 264213.0 True False 254799.65315879803 259542.9171175156 226230.02386002292 214334.3104310286 185176.21624838092 256753.44195799876 194249.85093424094 230542.51819132888 262714.4917514906 261872.2783746034 0.9729920812553969 0.9911049719674578 0.8638945109585258 0.8184688801784028 0.7071241652523823 0.9804529274790887 0.7417732496922418 0.8803624408901431 1.0032161226920036 1.0 17.998503819469835 -9.875535241436683 18.83589528096504 0.9999999999999963 0.8782749763975045 0.10522265018035903 0.0997325461251042 0.0 0.0 0.09906842124942845 0.024027621469092864 1.3318789607360993e-10 9.875535241436683 -0.12172502360249182 LPNNS(ph)SRPST(ph)PTINVLESK ddPTM_KYSE-520_SHP099_60min_R1 1 LPNNSSRPSTPTINVLESK 19 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 2 LPNNS(0.459)S(0.396)RPS(0.553)T(0.582)PT(0.011)INVLESK 103.63 0.00030682 1259300000.0 1384200.0 1230900.0 1050000.0 1110900.0 1091600.0 950590.0 1035200.0 1052200.0 1399100.0 1151700.0 True False 1307415.6666657107 1171765.7163814318 1117684.6800594004 1216479.6019957364 1177502.7096456084 944657.0152065426 1139848.1185783963 1048550.1637853257 1145058.7084408423 1141496.8340090418 1.1453519867190054 1.0265168342745927 0.9791395357041763 1.0656881085892707 1.0315426855019043 0.8275599082380459 0.9985556548371185 0.9185747454968589 1.0031203541925657 1.0 20.122495427515094 -1.0000000000002467 0.5252564159367463 0.9587010183212756 7.668204689160768 0.41491044474970007 0.06116962617429575 119.18587517271543 1.1804597312488396 0.032345444274802994 892.7735634983483 0.0999999999999432 1.0000000000002467 6.709503670839492 LPNNSS(ph)RPS(ph)TPTINVLESK ddPTM_KYSE-520_SHP099_60min_R1 1 LPNNSSRPSTPTINVLESK 19 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 2 LPNNS(0.471)S(0.529)RPS(0.528)T(0.47)PT(0.002)INVLESK 73.546 0.007186199999999999 954470000.0 508780.0 465190.0 446790.0 355470.0 443650.0 407970.0 448580.0 425090.0 590890.0 451850.0 True False 480556.95917221444 442841.57413557457 475590.7982892761 389253.7619240471 478562.73097679944 405423.7079012124 493926.844118911 423615.4620067523 483599.27112473035 447846.96053398063 1.0730383401491277 0.9888234445256969 1.061949371549191 0.869166916885913 1.0685854167820978 0.9052728803111987 1.102892031532352 0.9458933504911222 1.0798315356391417 1.0 18.772646289311783 -6.777914235747284 24.999993933113096 1.0276452757785366 0.9949560677924112 0.05629123652202084 0.07466120378287584 922.0085701176247 1399098.8857042969 0.029170916455584436 0.01972904063026503 1.6675764921919118e-07 6.777914235747284 -0.0326892079861254 LPNNSS(ph)RPST(ph)PTINVLESK ddPTM_KYSE-520_SHP099_60min_R1 1 LPNNSSRPSTPTINVLESK 19 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 2 LPNNS(0.449)S(0.544)RPS(0.505)T(0.495)PT(0.006)INVLESK 72.30199999999999 0.010133 1045100000.0 1020400.0 880490.0 759960.0 743820.0 652410.0 692510.0 719680.0 797770.0 993740.0 707940.0 True False 963796.37788303 838189.9387575655 808948.237578993 814512.4291623617 703750.9552948806 688187.7882164592 792432.2777999413 795002.7220709181 813301.8661468113 701668.2023689864 1.3735785298935324 1.1945673694883872 1.1528928271906942 1.1608227740866528 1.002968287459603 0.9807880503819122 1.129354693749147 1.133018026735163 1.1590975099069973 1.0 19.42042945944485 -3.840833318550145 0.8800977748435017 1.079263356894994 1.7694253647031233 0.6726340601801601 0.06296722409020558 2.788183935131349 1.0182552064014672 0.023676628185692893 2.202738175623336 0.0001442668939058452 3.840833318550145 0.6901620078081292 LPPKVES(ph)LESLYFTPIPAR ddPTM_KYSE-520_SHP099_60min_R1 3 LPPKVESLESLYFTPIPAR 19 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 LPPKVES(0.992)LES(0.007)LY(0.001)FTPIPAR;LPPKVES(0.997)LES(0.003)LYFTPIPAR;LPPKVES(1)LESLYFTPIPAR 171.29 4.6017e-09 1801759000.0 1281870.0 1462390.0 1164187.0 907980.0 1088240.0 1339590.0 848517.0 1127495.0 1494790.0 1127401.0 True False 1210762.1157555063 1392134.58930786 1239232.356785061 994274.1462058594 1173878.2967613922 1331229.1219143204 934293.3790878907 1123583.9830043123 1223373.8165894414 1117413.104244705 1.0835402870757442 1.2458548982641902 1.1090189940296946 0.8897999696163584 1.0505320658064536 1.1913491231285858 0.8361217311116189 1.0055224685804793 1.0948268030348172 1.0 20.09173121375327 -5.009083335847339 24.361614827086704 1.011030794539232 1.1678824611048197 0.29186825980386133 0.09986602918428904 369.33889087613824 990584.3303874442 0.026536709965186523 0.05096510886001027 9.793020511838456e-06 5.009083335847339 0.1568516665655877 LPPKVESLESLYFT(ph)PIPAR ddPTM_KYSE-520_SHP099_60min_R1 2 LPPKVESLESLYFTPIPAR 19 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 LPPKVESLESLYFT(1)PIPAR;LPPKVESLES(0.002)LYFT(0.998)PIPAR 103.53 0.0010029 396920000.0 405580.0 461500.0 459800.0 333186.0 343933.0 362393.0 267706.0 375060.0 503760.0 464070.0 True False 383081.6688963149 439328.8472743773 489439.4437060118 364851.89726397657 370998.570388918 360131.1708641422 294768.3350387827 373759.00439966226 412289.8827561716 459958.7008409962 0.8328610116427452 0.9551484654407038 1.0640943258842859 0.7932275149853133 0.8065910476540132 0.7829641448366392 0.6408582651003738 0.8125925299733976 0.8963628299721993 1.0 18.811144803504916 -5.292155696573096 24.474582361405204 0.8016997664797316 0.9511459992396999 0.25302014040025855 0.10073933535533715 608.704257983191 485010.5711789058 0.028453534739183092 0.0422098135676323 5.1032201438293355e-06 5.292155696573096 0.14944623275996827 LPPQSSGVDTSPCPNS(ph)PVFR ddPTM_KYSE-520_SHP099_60min_R1 2 LPPQSSGVDTSPCPNSPVFR 20 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 LPPQSSGVDTSPCPNS(1)PVFR;LPPQSSGVDTS(0.001)PCPNS(0.999)PVFR 164.74 7.6923e-09 1167480000.0 112271.0 144737.0 137480.0 103796.0 113496.0 245230.0 175245.0 227463.0 313290.0 248480.0 True False 106043.10382331006 137783.6172653337 146342.18077577732 113660.74063259459 122427.48949609564 243699.42860655024 192960.47482638236 226673.98394326342 256404.43339820753 246278.6605145147 0.43058177919990875 0.5594622651328465 0.594213808334208 0.46151274493348104 0.49710961250286745 0.9895271807042639 0.7835046464166149 0.920396365116271 1.0411151045833145 1.0 17.909932101446927 -6.257990177178826 24.994594286129104 0.9317206889940006 0.513546064517823 0.8878006912803957 0.07780959023801284 100.55731061554467 728688.2715210831 0.026808552371076277 0.0257781502176302 5.520899262441306e-07 6.257990177178826 -0.4181746244761776 LPPTFFCGVCS(ph)DTDEDNGNGEDFQSELQK ddPTM_KYSE-520_SHP099_60min_R1 5 LPPTFFCGVCSDTDEDNGNGEDFQSELQK 29 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 LPPTFFCGVCS(0.998)DT(0.002)DEDNGNGEDFQSELQK;LPPTFFCGVCS(0.5)DT(0.5)DEDNGNGEDFQSELQK;LPPTFFCGVCS(0.877)DT(0.123)DEDNGNGEDFQSELQK;LPPTFFCGVCS(0.874)DT(0.126)DEDNGNGEDFQSELQK;LPPTFFCGVCS(0.952)DT(0.048)DEDNGNGEDFQSELQK 160.0 3.9620999999999997e-10 653085000.0 568929.0 551192.0 497366.0 438668.0 478138.0 519544.0 454172.0 516385.0 678868.0 533174.0 True False 537369.3742381557 524711.9089639408 529427.0081737366 480358.87482965604 515764.74036692176 516301.33318093815 500084.13805157115 514593.7809601649 555602.6840696288 528450.4931630952 1.0168774202890332 0.9929253842175892 1.0018478836206517 0.908995035569781 0.9759944347478199 0.977009842663904 0.946321641329665 0.9737785991645319 1.0513807655737273 1.0 19.011408796350235 -7.741559106923046 24.240721657607942 1.0256903528867192 0.9728114795144138 0.31200001267559396 0.03051626514714367 173.96886342200136 212128.35008114658 0.021164280092336105 0.007974270143196346 1.813179887615751e-08 7.741559106923046 -0.052878873372305346 LPPTFFCGVCSDT(ph)DEDNGNGEDFQSELQK ddPTM_KYSE-520_SHP099_60min_R1 1 LPPTFFCGVCSDTDEDNGNGEDFQSELQK 29 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 LPPT(0.001)FFCGVCS(0.474)DT(0.525)DEDNGNGEDFQSELQK 100.86 0.0029149 105540000.0 39315.0 37717.0 30877.0 35216.0 32808.0 33214.0 32933.0 34484.0 45466.0 36472.0 True False 37134.118577490546 35905.0187056288 32867.38082494676 38562.918051923545 35389.80294801494 33006.69910589229 36262.18903510657 34364.38305262612 37210.52050458964 36148.88645478662 1.0272548401715282 0.9932537963662356 0.9092224975188595 1.0667802478551114 0.9790011925340742 0.9130765105911509 1.0031343311352525 0.9506346231607308 1.0293683749050158 1.0 15.141663586037028 -7.776650839736839 24.997416309307432 1.0146841888567293 0.9797180864266043 0.08162553954294594 0.04610796314342818 725.2306141273554 1191756.758511776 0.0429659895322871 0.011264127383849382 1.672434663281593e-08 7.776650839736839 -0.03496610243012499 LPQT(ph)SDDEKKDF ddPTM_KYSE-520_SHP099_60min_R1 1 LPQTSDDEKKDF 12 2 Q9GZT3-2;Q9GZT3 Q9GZT3-2 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial 1 LPQT(0.5)S(0.5)DDEKKDF 136.6 0.00084394 5970200000.0 3805400.0 3549200.0 2965400.0 3048700.0 3284500.0 3126000.0 3741000.0 2880500.0 3954600.0 2998500.0 True False 3594306.8761231713 3378691.1045421925 3156554.4288077573 3338447.5313749234 3542971.4637513678 3106489.4744691746 4119176.78864159 2870508.217813754 3236544.327353416 2971935.622797703 1.209416128852611 1.1368655090050641 1.0621207285224634 1.1233243095058014 1.1921427357218817 1.0452748204366575 1.386024904793834 0.965871600916958 1.0890358130660371 1.0 21.502971434300136 LPQTS(ph)DDEKKDF ddPTM_KYSE-520_SHP099_60min_R1 7 LPQTSDDEKKDF 12 2 Q9GZT3-2;Q9GZT3 Q9GZT3-2 SLIRP SRA stem-loop-interacting RNA-binding protein, mitochondrial 1 LPQT(0.184)S(0.816)DDEKKDF;LPQT(0.131)S(0.869)DDEKKDF;LPQT(0.184)S(0.816)DDEKKDF;LPQT(0.008)S(0.992)DDEKKDF;LPQT(0.168)S(0.832)DDEKKDF;LPQT(0.029)S(0.971)DDEKKDF;LPQT(0.246)S(0.754)DDEKKDF 159.22 5.4756e-05 46158300000.0 25145600.0 24864500.0 23431800.0 21662900.0 23456900.0 23697700.0 24344400.0 20871100.0 27673900.0 21597200.0 True False 23750723.441489156 23669972.097624637 24942251.320205547 23721735.50281164 25302824.57849585 23549793.864084546 26805369.530448105 20798703.025451355 22649017.362247888 21405865.610367328 1.1095427708368946 1.1057703775436558 1.1652063866142124 1.1081885654426742 1.1820509872883225 1.1001561110744742 1.2522441287058104 0.9716356910779674 1.0580752852750077 1.0 24.351502840626267 -7.281616036692414 24.998750932827033 1.0111416057520026 1.143494252555297 0.6248936540309808 0.04834530931779256 536.2195398854118 664368.7554957136 0.024777811115729024 0.011925524765056131 5.228582479723163e-08 7.281616036692414 0.13235264680329428 LPRLS(ph)CEPVMEEK ddPTM_KYSE-520_SHP099_60min_R1 2 LPRLSCEPVMEEK 13 1 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 LPRLS(1)CEPVMEEK;LPRLS(1)CEPVMEEK 190.46 1.5792e-08 1637580000.0 981110.0 1016650.0 943940.0 922430.0 895920.0 1042890.0 1029400.0 1224350.0 1699060.0 1354290.0 True False 926685.8725057029 967808.6079772379 1004787.8827573999 1010097.4698613076 966423.8069125059 1036380.936669598 1133461.7979758517 1220103.0156154383 1390553.5338170978 1342292.0442216753 0.6903757468390863 0.7210119527590729 0.748561303840569 0.7525169162773442 0.7199802837786201 0.7720979507634205 0.8444226447256392 0.9089698630545874 1.0359545374668497 1.0 20.35626716404578 -7.194319296443674 1.1765746592970772 1.0220133407045169 0.7270029556639027 0.9568886275644636 0.02422299738867343 0.09137714940635541 0.2257111837296313 0.0203336757555552 0.00821144352441811 6.392646706608573e-08 7.194319296443674 -0.29501038504061416 LPS(ph)AESLSR ddPTM_KYSE-520_SHP099_60min_R1 2 LPSAESLSR 9 0 O43281-3;O43281-2;O43281 O43281-3 EFS Embryonal Fyn-associated substrate 1 LPS(1)AESLSR;LPS(1)AESLSR 181.44 1.7264e-05 702050000.0 412610.0 393690.0 452070.0 326340.0 397650.0 446610.0 413150.0 474340.0 567340.0 449640.0 True False 389721.70078235667 374776.5414592629 481211.1555375745 357355.25548230164 428942.79268099676 443822.54132843233 454915.23395543307 472694.62525178806 464325.357477541 445656.53941462684 0.8744889086430977 0.8409537576886781 1.079780308328133 0.8018624745228476 0.9624963503159099 0.995884727533442 1.0207754037514352 1.060670232445542 1.0418905960348654 1.0 18.765572750109897 -6.265583858942795 2.192707282479541 1.0338277602917216 0.9067322638077312 0.40365880096307805 0.07062692938249594 0.32721582017523704 3.0910540480868627 0.027414581318181294 0.025181538225843608 5.425204846583485e-07 6.265583858942795 -0.12709549648399043 LPS(ph)ALNR ddPTM_KYSE-520_SHP099_60min_R1 2 LPSALNR 7 0 Q53ET0;H0YDQ8 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 1 LPS(1)ALNR;LPS(1)ALNR 68.398 0.03044 1873850000.0 880850.0 935230.0 562580.0 754540.0 1113990.0 859800.0 708880.0 850070.0 842740.0 671490.0 True False 831987.4945690595 890300.1469911513 598844.8069598258 826251.2547392778 1201654.6752639331 854433.6692733834 780540.5084020986 847121.3055778294 689719.6597465774 665541.1210113151 1.2500917949364612 1.3377086988078306 0.8997863363421605 1.2414728837246862 1.805530323112076 1.283817997564206 1.1727908069993294 1.2728309023048736 1.0363291432669435 1.0 19.344168281440002 -7.770724822534225 1.8725606862732453 0.9879583948799867 1.2920522878123304 0.19997302100470404 0.2099225392582025 0.5867253302697304 4.022766955548375 0.21181725701497697 0.062102697324094965 1.6954117061570486e-08 7.770724822534225 0.3040938929323437 LPS(ph)EPGMTLLTIR ddPTM_KYSE-520_SHP099_60min_R1 3 LPSEPGMTLLTIR 13 0 Q96BJ3 Q96BJ3 AIDA Axin interactor, dorsalization-associated protein 1 LPS(1)EPGMTLLTIR;LPS(1)EPGMTLLTIR;LPS(1)EPGMTLLTIR 116.98 0.00012088 91471000.0 89258.0 86763.0 75881.0 76509.0 80680.0 81327.0 60085.0 86652.0 103339.0 85014.0 True False 84306.68080858831 82594.77524608198 80772.41067389263 83780.39235673031 87029.05699359438 80819.40802628102 66158.97817309025 86351.42443672879 84575.24256419715 84260.84209989119 1.000544009620065 0.9802272703157405 0.9585996135445333 0.9942980662050434 1.0328529222437806 0.959157373842403 0.7851687275408287 1.0248108407741667 1.0037312760764157 1.0 16.36257471376514 -6.510310017635681 24.983541548687636 0.9435906952766393 0.9912350486626681 0.07505131563093459 0.06442628349961196 1490.6536080653575 2963062.904268329 0.024263664068686616 0.0203701802900991 3.0880902370574163e-07 6.510310017635681 0.04764435338602879 LPS(ph)GSGAAS(ph)PTGSAVDIR ddPTM_KYSE-520_SHP099_60min_R1 7 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 LPS(1)GS(0.001)GAAS(0.973)PT(0.026)GS(0.001)AVDIR;LPS(0.967)GS(0.034)GAAS(0.85)PT(0.14)GS(0.008)AVDIR;LPS(1)GSGAAS(0.964)PT(0.036)GSAVDIR;LPS(0.999)GS(0.001)GAAS(0.734)PT(0.266)GSAVDIR;LPS(0.999)GS(0.001)GAAS(0.998)PT(0.002)GSAVDIR;LPS(1)GSGAAS(0.982)PT(0.018)GSAVDIR;LPS(1)GSGAAS(0.998)PT(0.002)GSAVDIR 306.43 1.9328999999999998e-47 7505240000.0 3946990.0 3702830.0 3537130.0 3376020.0 3765040.0 3770890.0 3952970.0 4459420.0 5242980.0 4250130.0 True False 3728042.5965704997 3524940.4887388563 3765139.0594080985 3696875.925762576 4061327.2278527822 3747354.4767693747 4352574.7848694315 4443951.312856455 4290986.996770195 4212477.1547511 0.8850000746866428 0.8367856629829326 0.8938064044244217 0.8776014183466857 0.9641185171229141 0.8895845221481783 1.0332577780179344 1.054949653043052 1.018637452295865 1.0 22.006237431567236 -6.466705564589121 1.0230453803924235 1.0366642096237315 0.8710778629950742 0.7600348071027182 0.036075470845163334 0.24055750795119052 0.5209134436855622 0.02223261960071734 0.016564481088204096 3.414243060808081e-07 6.466705564589121 -0.16558634662865734 LPS(ph)GSGAASPTGSAVDIR ddPTM_KYSE-520_SHP099_60min_R1 3 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPS(0.999)GS(0.001)GAASPTGSAVDIR;LPS(0.999)GS(0.001)GAASPTGSAVDIR;LPS(0.971)GS(0.028)GAASPTGSAVDIR 198.98 5.681799999999999e-14 11790200000.0 2001290.0 1976110.0 1779880.0 1576090.0 1550940.0 2098700.0 1800004.0 2325230.0 2753950.0 2342510.0 True False 1890274.454227293 1881174.7093984198 1894613.9127086902 1725881.1197312607 1672990.1543585202 2085601.2348267604 1981965.97066614 2317164.3198427605 2253902.101429964 2321757.183845205 0.8141568237108641 0.8102374884366204 0.8160258643287164 0.7433512564276522 0.7205706806892606 0.8982856817837719 0.8536491173395161 0.9980218155307532 0.9707742554271492 1.0 21.14678566815128 -6.953805774209756 1.3796263188731928 0.9955931415063353 0.7862401831789472 0.8028122651666331 0.042574816102199875 0.19314996484520783 0.7134567762602881 0.03057036461518262 0.01499389547687602 1.112229028705053e-07 6.953805774209756 -0.2093529583273881 LPS(ph)IVVEPTEGEVESGELR ddPTM_KYSE-520_SHP099_60min_R1 1 LPSIVVEPTEGEVESGELR 19 0 B5MBX5;B5MCP4;Q53QV2 B5MBX5 LBH Protein LBH 1 LPS(1)IVVEPTEGEVESGELR 92.439 0.00054467 0.0 10983.0 12085.0 14194.0 10206.0 11356.0 10050.0 11263.0 9961.7 14986.0 15524.0 True False 10373.751095932304 11504.418460045183 15108.967951202978 11175.975171454216 12249.652593198527 9987.274222141787 12401.573956287157 9927.145187778266 12264.920166317266 15386.46943748925 0.6742125695617073 0.7476970923566507 0.9819645769022141 0.7263508511071336 0.7961314740178247 0.649094599818183 0.8060051727052229 0.6451866835409753 0.7971237466883531 1.0 13.909374609957712 -8.030144056376862 23.410152060741385 1.0000000038797252 0.7571713526924219 0.385043139428787 0.09304708589978658 1755.584377830611 1363402.1502960226 0.09027455642846521 0.023308790259282435 9.32944789752958e-09 8.030144056376862 -0.24282865118730335 LPS(ph)KPKEEVPHAEEFLDDSTVWGIR ddPTM_KYSE-520_SHP099_60min_R1 2 LPSKPKEEVPHAEEFLDDSTVWGIR 25 2 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 LPS(1)KPKEEVPHAEEFLDDSTVWGIR;LPS(1)KPKEEVPHAEEFLDDSTVWGIR 209.47 2.8785999999999998e-21 826200000.0 224402.0 227371.0 223456.0 246600.0 232170.0 203522.0 226903.0 250854.0 293810.0 231638.0 True False 211953.97372570352 216447.75586917094 237860.33130224136 270036.78985700663 250440.458133401 202251.74370534727 249840.56959987798 249983.84602376388 240461.51034736933 229585.86753163705 0.9232013102744495 0.9427747369482328 1.036040823677721 1.176190820281198 1.0908356896092055 0.8809416096897902 1.0882227738405972 1.0888468384898125 1.0473706980863429 1.0 17.808674312140564 -4.771921615385526 4.3412620123983245 1.056330797031402 0.9292431593880653 0.3032951981907287 0.07196302892677618 0.23620059811157204 10.442601686324963 0.01994831156679193 0.050104886721899486 1.6907460622047845e-05 4.771921615385526 -0.12708763764333664 LPS(ph)LGNKEPPGQEK ddPTM_KYSE-520_SHP099_60min_R1 3 LPSLGNKEPPGQEK 14 1 Q9UPY5 Q9UPY5 SLC7A11 Cystine/glutamate transporter 1 LPS(1)LGNKEPPGQEK;LPS(1)LGNKEPPGQEK;LPS(1)LGNKEPPGQEK 120.9 6.4845e-05 1791510000.0 1053020.0 1326450.0 1112190.0 1552640.0 1373030.0 1610160.0 1371590.0 2400230.0 2655170.0 1418070.0 True False 994606.881456673 1262725.3509579578 1183883.5469669178 1700202.4387817606 1481079.6495279497 1600110.3941814743 1510243.7026284214 2391904.1623478956 2173058.059388803 1405507.0030417643 0.7076498938135269 0.8984127067493781 0.8423177859696079 1.2096719796502071 1.0537689576235714 1.138457788341541 1.0745188030795922 1.7018087830024287 1.546102619685226 1.0 20.42265921139423 -5.6396573630772675 0.5850120474130391 1.3964956701659341 0.7114949240168776 0.4911162923527287 0.20742348034157806 0.9283688449597647 0.6277073163998236 0.15167204150270386 0.3538228068229604 2.2926757474936515e-06 5.6396573630772675 -0.6850007461490565 LPS(ph)PDVR ddPTM_KYSE-520_SHP099_60min_R1 4 LPSPDVR 7 0 Q9H425;Q9H425-2;Q9H425-3;E5RFY9 Q9H425 C1orf198 Uncharacterized protein C1orf198 1 LPS(1)PDVR;LPS(1)PDVR;LPS(1)PDVR;LPS(1)PDVR 97.431 0.005797699999999999 802900000.0 2149930.0 1782390.0 1626290.0 1657880.0 2027440.0 2053280.0 1953720.0 2131190.0 2283730.0 2156470.0 True False 2030669.0971207994 1696761.3089780658 1731123.2555560018 1815444.4167402019 2186987.9934443836 2040464.7178944577 2151221.084069729 2123797.399313488 1869062.2001483857 2137365.3535082745 0.9500804781866873 0.7938564673526682 0.8099332445501344 0.84938422612696 1.0232167326258277 0.9546635134443608 1.0064826214847693 0.9936520192149105 0.8744701494671954 1.0 21.02740210747737 -5.746039482743201 24.123173626213813 0.9756126505603584 0.8438251228983001 0.5545376340968544 0.05456607982262063 113.30045830705228 177478.18759552573 0.015852139132145664 0.020379495941892593 1.7945704707509258e-06 5.746039482743201 -0.13178752766205826 LPS(ph)PGLHGQR ddPTM_KYSE-520_SHP099_60min_R1 3 LPSPGLHGQR 10 0 P10070;P10070-3;P10070-1;P10070-4;P10070-2 P10070;P10070-4 GLI2 Zinc finger protein GLI2 1 LPS(1)PGLHGQR;LPS(1)PGLHGQR;LPS(1)PGLHGQR 132.79 0.00021068 836800000.0 604550.0 578610.0 580300.0 431690.0 509500.0 556030.0 518960.0 560340.0 692790.0 631050.0 True False 571014.4063594525 550812.7070886835 617707.0665128279 472717.68780766864 549594.7513415503 552559.6105211442 571421.5413615193 558396.3113243392 566996.7998146891 625459.3879494712 0.9129520115310554 0.8806530331161674 0.9876053959921222 0.7557927771416838 0.8787057352250506 0.8834460257006865 0.9136029490817755 0.892777887873753 0.9065285624276134 1.0 19.254556685436935 -8.734232904843644 0.7724884851135395 1.0019080840418833 0.8845261183831284 0.2815413206362597 0.05361166647880845 3.8730549538522747 3.0394005613353228 0.0709421874780215 0.018689453759850976 1.8440262336330821e-09 8.734232904843644 -0.1173819656587548 LPS(ph)PSMDK ddPTM_KYSE-520_SHP099_60min_R1 1 LPSPSMDK 8 0 D6RAU9;Q9NQ86-4;Q9NQ86 D6RAU9 TRIM36 E3 ubiquitin-protein ligase TRIM36 1 LPS(0.889)PS(0.111)MDK 105.2 0.0039458 0.0 547890.0 503900.0 406010.0 411310.0 448500.0 568830.0 441950.0 635380.0 572610.0 648910.0 True False 517497.449508363 479691.8876306796 432182.05423896847 450400.77873513923 483794.3983840743 565279.7209732253 486626.6190163463 633176.0150788069 468638.45832343074 643161.1622443415 0.8046155145664129 0.7458346613417576 0.6719654102415772 0.700292252043709 0.7522133281429039 0.8789083578999933 0.756616922138519 0.9844748909733745 0.7286485656069384 1.0 19.2948207653921 -6.179044148456921 4.220048756327518 0.861927431465432 0.7274807990617863 0.38076162373718003 0.0857516872675342 0.2507647588239665 8.25782810390127 0.02771688372195581 0.027503466254272656 6.621491891213069e-07 6.179044148456921 -0.13444663240364574 LPS(ph)PSMDKIDR ddPTM_KYSE-520_SHP099_60min_R1 2 LPSPSMDKIDR 11 1 D6RAU9;Q9NQ86-4;Q9NQ86 D6RAU9 TRIM36 E3 ubiquitin-protein ligase TRIM36 1 LPS(0.966)PS(0.034)MDKIDR;LPS(0.959)PS(0.041)MDKIDR 106.76 0.00045276 1448860000.0 1668250.0 1476620.0 1224400.0 1637760.0 1462810.0 1457970.0 1378750.0 1559840.0 1864620.0 1340020.0 True False 1575708.8469260733 1405680.9587481946 1303326.7831092672 1793412.2179895032 1577924.8247496246 1448870.2684234874 1518127.505303288 1554429.2791093923 1526052.0112450616 1328148.4653197834 1.1863951117442912 1.058376375422565 0.9813110635906659 1.35031004802441 1.1880635832152255 1.0908948105245428 1.143040514629336 1.1703731319940398 1.1490070960384902 1.0 20.340984994780598 -11.505196277296548 1.6590082777564537 3.578046662066248e-05 1.1451673549360981 0.18739809141352626 0.09143578706737925 1992223.3494281159 133161.2825669633 7455391.601866196 0.023970563532535717 3.1246668698403834e-12 11.505196277296548 1.1451315744694774 LPS(ph)PTPENK ddPTM_KYSE-520_SHP099_60min_R1 4 LPSPTPENK 9 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 LPS(0.998)PT(0.002)PENK;LPS(0.968)PT(0.032)PENK;LPS(0.819)PT(0.181)PENK;LPS(0.992)PT(0.008)PENK 143.24 0.00037476 4947600000.0 7345060.0 7450330.0 5901000.0 5623120.0 6402480.0 7984710.0 7497650.0 8980110.0 9160900.0 8870000.0 True False 6937614.879785907 7092404.963626686 6281387.901933829 6157539.634147318 6906318.7508719405 7934874.463112205 8255585.6320124585 8948960.094383422 7497511.4874960445 8791418.700755581 0.789134850236362 0.8067418018683522 0.7144908137970921 0.7004034097042957 0.7855750005716796 0.9025704193147165 0.9390504437358819 1.0179199056477997 0.8528215687021787 1.0 23.067664566022778 -6.321238419112005 2.5065999495255293 0.9523985771864727 0.752435809152065 0.7739314874376494 0.05028706432388724 0.13960953246471358 1.7247017713759065 0.019825000652371104 0.01762946709439055 4.772671914426006e-07 6.321238419112005 -0.1999627680344077 LPS(ph)PTS(ph)PFSSLSQDQAATSK ddPTM_KYSE-520_SHP099_60min_R1 1 LPSPTSPFSSLSQDQAATSK 20 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDG6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 2 LPS(0.505)PT(0.505)S(0.987)PFS(0.002)SLSQDQAATSK 147.17 9.739700000000001e-07 102370000.0 37597.0 36169.0 29246.0 41915.0 37588.0 38015.0 26781.0 40289.0 38224.0 42238.0 True False 35511.41946223861 34431.38694922418 31131.24395525448 45898.588997795756 40545.96175353526 37777.73428405172 29488.28483737249 40149.246862523316 31283.48514862613 41863.804180666746 0.8482606910013747 0.8224619721760749 0.7436315109086836 1.0963788383806823 0.9685207196784069 0.9023961157714849 0.7043861735573129 0.95904439761986 0.7472680937838242 1.0 15.35341579537657 LPS(ph)PTSPFSSLSQDQAATSK ddPTM_KYSE-520_SHP099_60min_R1 1 LPSPTSPFSSLSQDQAATSK 20 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDG6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 LPS(0.781)PT(0.174)S(0.044)PFSSLSQDQAATSK 117.29 7.3521e-05 396930000.0 566700.0 601450.0 478450.0 445240.0 428320.0 661130.0 469780.0 641640.0 646250.0 708490.0 True False 535264.0213115575 572555.4392051449 509291.65254706715 487555.475733713 462026.34719256696 657003.6424362789 517269.9470109725 639414.300599902 528907.2906367624 702213.3297968791 0.7622527209308131 0.8153582606738058 0.7252662843845245 0.6943124760601488 0.6579572440275547 0.9356183008179616 0.7366279235408377 0.9105698702484868 0.7532002999569278 1.0 19.42154985694048 -6.259479229993742 24.999100738280877 0.853452934951072 0.7333543337154999 0.3932638890014627 0.08367937871322675 207.70006799014968 2648948.6571742906 0.027443295322661716 0.026139327432215236 5.502002330463371e-07 6.259479229993742 -0.12009860123557214 LPS(ph)SPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 2 LPSSPVYEDAASFK 14 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 LPS(0.587)S(0.408)PVY(0.006)EDAASFK;LPS(0.498)S(0.498)PVY(0.004)EDAASFK 92.781 0.0027716 1090980000.0 1036840.0 1145100.0 899680.0 787620.0 925890.0 1349030.0 849580.0 1150350.0 1317860.0 1431500.0 True False 979324.4183107035 1090087.677169859 957674.812338896 862475.1679934124 998752.275406534 1340610.2033727297 935463.83750177 1146359.704343708 1078569.8445471006 1418818.0236901476 0.6902396233758135 0.7683068998057222 0.6749807208172599 0.6078828670009667 0.7039326106169125 0.9448781880328738 0.6593261587337037 0.8079681010551208 0.76018899290685 1.0 20.436258131833704 -6.031904698538574 24.72800033340048 0.8129549894138062 0.6862083235745952 0.35625933201837257 0.09582164013759768 734.269726475832 569100.307815126 0.030637973354726056 0.03066824909092949 9.291702612761113e-07 6.031904698538574 -0.12674666583921101 LPS(ph)TS(ph)GSEGVPFR ddPTM_KYSE-520_SHP099_60min_R1 1 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 2 LPS(0.999)T(0.056)S(0.632)GS(0.313)EGVPFR 153.39 4.525e-06 381550000.0 253370.0 332480.0 275000.0 392160.0 436410.0 531580.0 573940.0 792860.0 913040.0 652570.0 True False 239315.06101942694 316507.16173734545 292726.94001555716 429430.7684927964 470752.98416676425 528262.2120404113 631959.4563146099 790109.7537149156 747254.9518653619 646788.7374917773 0.3700049910384678 0.4893516899579119 0.45258509161854205 0.663942866658614 0.727831140029319 0.8167461512842549 0.9770724499089535 1.221588608328172 1.1553308036302377 1.0 19.302935031872032 -6.171872268266055 0.7529282471350667 1.1540951583517463 0.40909775378065916 0.9239413405653213 0.07799814740838716 0.16827098963685386 0.2106702814242727 0.05450651695076328 0.05880153008898612 6.731746167030844e-07 6.171872268266055 -0.7449974045710871 down LPS(ph)TSGS(ph)EGVPFR ddPTM_KYSE-520_SHP099_60min_R1 1 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 2 LPS(0.898)T(0.117)S(0.246)GS(0.739)EGVPFR 56.527 0.057367999999999995 349710000.0 212410.0 260900.0 204950.0 307390.0 304950.0 339000.0 406220.0 518560.0 592550.0 444770.0 True False 200627.19387116263 248365.97238111607 218161.4049315945 336604.25317982654 328947.8300718468 336884.17525433487 447284.68192515115 516761.2363928139 484957.85696992424 440829.6838258235 0.45511271412120374 0.5634057358062305 0.4948881913718687 0.763569844613328 0.7462016332861504 0.764204833782113 1.014642839028685 1.1722469138375713 1.100102544731394 1.0 18.749861847316957 -6.20404426315508 0.7194961080140369 1.124275237349573 0.4885196381301569 0.885661468352587 0.08197137407874741 0.2222389338512881 0.25367355011381104 0.06074478848587383 0.06468465440869112 6.251089786211519e-07 6.20404426315508 -0.6357555992194162 down LPS(ph)TSGSEGVPFR ddPTM_KYSE-520_SHP099_60min_R1 7 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 LPS(0.973)T(0.026)SGS(0.001)EGVPFR;LPS(0.972)T(0.027)S(0.001)GSEGVPFR;LPS(0.838)T(0.158)S(0.004)GSEGVPFR;LPS(0.905)T(0.085)S(0.008)GS(0.001)EGVPFR;LPS(0.707)T(0.146)S(0.146)GS(0.001)EGVPFR;LPS(0.828)T(0.165)S(0.008)GSEGVPFR;LPS(0.971)T(0.026)S(0.001)GS(0.002)EGVPFR 183.52 3.3803999999999996e-08 5214580000.0 927544.0 974581.0 786875.0 848037.0 933124.0 1427370.0 1422380.0 1989290.0 2374060.0 1554560.0 True False 876091.2853068782 927760.6658840957 837598.2215445145 928634.1815083795 1006555.5500507031 1418461.2543739835 1566168.0514910542 1982389.6172937744 1942990.5491823808 1540787.8078293772 0.5685995702036956 0.6021339610618424 0.5436168545002323 0.6027008889800445 0.6532733092356909 0.9206077872411749 1.0164722510995412 1.2866078036316464 1.2610370742221906 1.0 20.55523676169549 -6.521153469174311 1.405834360531472 1.1993263029437549 0.5733360914221823 0.9128270924092369 0.08079983698958294 0.10520582913255369 0.42235771287709495 0.04154931232273675 0.030244804843419737 3.011941488774105e-07 6.521153469174311 -0.6259902115215725 LPS(ph)VDLK ddPTM_KYSE-520_SHP099_60min_R1 1 LPSVDLK 7 0 Q8WUM9;H7BZK4 Q8WUM9 SLC20A1 Sodium-dependent phosphate transporter 1 1 LPS(1)VDLK 76.221 0.020144 83068000.0 247740.0 255410.0 201590.0 324070.0 318840.0 352110.0 342820.0 436370.0 424680.0 345730.0 True False 233997.36834255367 243139.72022177384 214584.81395540427 354869.51536480204 343930.89404855785 349912.35088142694 377475.59120077826 434856.3343195238 347568.817311598 342667.1011738701 0.6828708316058123 0.7095508129868708 0.6262194801318947 1.0356101129905098 1.0036881068254244 1.0211436980169293 1.1015810677700462 1.269034385938546 1.0143046009404935 1.0 18.386448162495675 -5.3055568414647265 5.468830609923686 1.0745589493898264 0.6760409563071282 0.8413533245478424 0.07769963291418838 0.07567085824622678 5.732658001490933 0.023588240712989986 0.03611747692024513 4.948153441070282e-06 5.3055568414647265 -0.3985179930826982 LPS(ph)VEEAEVPKPLPPASK ddPTM_KYSE-520_SHP099_60min_R1 6 LPSVEEAEVPKPLPPASK 18 1 E9PDI4;O00515;A0A0J9YYF6;A0A0J9YVY2;A0A0J9YW63 E9PDI4 LAD1 Ladinin-1 1 LPS(1)VEEAEVPKPLPPASK;LPS(1)VEEAEVPKPLPPASK;LPS(1)VEEAEVPKPLPPASK;LPS(1)VEEAEVPKPLPPASK;LPS(1)VEEAEVPKPLPPASK;LPS(1)VEEAEVPKPLPPASK 122.3 3.7102e-05 3404900000.0 3271810.0 2717750.0 2256050.0 2627110.0 2714420.0 3919140.0 3787990.0 4862390.0 4007960.0 4394520.0 True False 3090316.1771084643 2587185.2105740826 2401478.5928076315 2876789.7445305763 2928029.41106287 3894679.193528833 4170916.9964198023 4845523.503980363 3280215.4964495464 4355587.971684823 0.7095060867093615 0.593992183694389 0.5513557775481446 0.660482525719204 0.6722466473178026 0.8941798946198987 0.9576013671482368 1.1124843615788624 0.7531050957468546 1.0 22.054436054296804 -6.2811124559383025 2.2690916052340993 0.9652034104624926 0.6211685273276109 0.7420198435253209 0.09098510937870949 0.14976444259653884 1.515924406883504 0.03462866117534884 0.0315165025740243 5.23464873372143e-07 6.2811124559383025 -0.34403488313488173 LPS(ph)VEEAEVPKPLPPASKDEDEDIQSILR ddPTM_KYSE-520_SHP099_60min_R1 8 LPSVEEAEVPKPLPPASKDEDEDIQSILR 29 2 E9PDI4;O00515;A0A0J9YYF6;A0A0J9YVY2;A0A0J9YW63 E9PDI4 LAD1 Ladinin-1 1 LPS(0.998)VEEAEVPKPLPPAS(0.002)KDEDEDIQSILR;LPS(1)VEEAEVPKPLPPASKDEDEDIQSILR;LPS(1)VEEAEVPKPLPPASKDEDEDIQSILR;LPS(1)VEEAEVPKPLPPASKDEDEDIQSILR;LPS(1)VEEAEVPKPLPPASKDEDEDIQSILR;LPS(1)VEEAEVPKPLPPASKDEDEDIQSILR;LPS(1)VEEAEVPKPLPPASKDEDEDIQSILR;LPS(1)VEEAEVPKPLPPASKDEDEDIQSILR 241.83 3.2586999999999994e-31 23108960000.0 2858624.0 2761522.0 2320180.0 2563788.0 2724063.0 3317567.0 3369419.0 3964051.0 4627689.0 3974785.0 True False 2700050.428194336 2628854.3379909717 2469742.5152192544 2807449.640689028 2938431.2603017045 3296860.8337640055 3710032.75488051 3950300.632297455 3787417.3321463047 3939571.497235932 0.6853665252905642 0.6672944861732854 0.6269063823190076 0.712628173561206 0.7458758553724323 0.8368577232516625 0.9417350992318656 1.0027234269181435 0.9613779911860005 1.0 21.90960728722108 -6.426469414031674 1.1316903243188785 0.9958610055303321 0.6619530362475767 0.9768479049661453 0.021334478830542212 0.06558823324271226 0.17289328845516425 0.012403292330288574 0.009603230733439144 3.745679257256215e-07 6.426469414031674 -0.33390796928275535 LPSANQGS(ph)PFK ddPTM_KYSE-520_SHP099_60min_R1 2 LPSANQGSPFK 11 0 E5RFE4;Q56NI9;E5RFP7;E5RIE3 E5RFE4 ESCO2 N-acetyltransferase ESCO2 1 LPSANQGS(1)PFK;LPSANQGS(1)PFK 140.31 9.521200000000001e-05 2243300000.0 2933300.0 2475700.0 2393100.0 1927020.0 2022050.0 2346500.0 2130140.0 2640600.0 2653400.0 2597100.0 True False 2770584.001611421 2356763.655898537 2547363.0550953797 2110163.401420312 2181173.831109288 2331854.6231100196 2345475.3393630087 2631440.3749206727 2171609.4467707356 2574091.7145132255 1.0763346099870235 0.9155709730972867 0.9896162754158508 0.8197700919212799 0.8473566885015827 0.9058941489778991 0.9111856139929927 1.022279183015937 0.8436410538625266 1.0 21.295632026812928 -3.488553119916366 1.3722496386813547 0.9104237118965023 1.912253560177119 0.33854696527038863 0.06600494754748441 10.786821205186524 3.743282770055399 0.018824455010991864 25.050742102390554 0.0003246735279044282 3.488553119916366 1.0018298482806167 LPSGSGAAS(ph)PTGSAVDIR ddPTM_KYSE-520_SHP099_60min_R1 13 LPSGSGAASPTGSAVDIR 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LPSGSGAAS(0.921)PT(0.079)GSAVDIR;LPS(0.001)GS(0.021)GAAS(0.75)PT(0.223)GS(0.005)AVDIR;LPSGSGAAS(0.991)PT(0.008)GSAVDIR;LPSGSGAAS(1)PTGSAVDIR;LPSGSGAAS(0.982)PT(0.017)GS(0.001)AVDIR;LPSGSGAAS(0.972)PT(0.028)GSAVDIR;LPSGSGAAS(0.965)PT(0.035)GSAVDIR;LPSGSGAAS(0.778)PT(0.222)GSAVDIR;LPSGSGAAS(0.999)PT(0.001)GSAVDIR;LPSGSGAAS(0.969)PT(0.028)GS(0.002)AVDIR;LPSGSGAAS(0.979)PT(0.02)GS(0.001)AVDIR;LPSGSGAAS(0.996)PT(0.004)GSAVDIR;LPSGSGAAS(0.981)PT(0.018)GS(0.001)AVDIR 298.68 3.1164999999999993e-38 117096130000.0 12931140.0 18203810.0 11562030.0 9334510.0 11038580.0 14637400.0 11469600.0 13940700.0 17866040.0 15511670.0 True False 12213823.88661148 17329271.643124137 12307336.953702085 10221659.023877226 11907253.445071297 14546042.55713217 12629059.100508865 13892342.96548384 14622017.502217442 15374248.671696637 0.7944338710415574 1.1271621796404672 0.8005163189768999 0.6648558405780753 0.7744933556975739 0.9461303031939922 0.8214423592457202 0.9036111788057049 0.95107200452247 1.0 23.874012572933168 -7.754448134337306 1.4929764684065376 0.9995647797153397 0.8484426910481812 0.16989540798528324 0.11522144954833338 0.763145211459073 3.388901907023338 0.11542185344058928 0.0354226790719343 1.7601588584007395e-08 7.754448134337306 -0.1511220886671586 LPSGSPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 LPSGSPSPK 9 0 A0A075B784;Q9P275;E9PEW0 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 LPSGS(0.187)PS(0.813)PK 104.43 0.0023696999999999998 0.0 331920.0 358290.0 250490.0 254940.0 278050.0 321300.0 356370.0 359730.0 296760.0 321130.0 True False 313507.73593388457 341077.2105957458 266636.98619817075 279169.42094949406 299930.95311190997 319294.6475198168 392395.357436034 358482.18059161305 242875.8647108172 318285.0380353591 0.9849904911303313 1.0716093118956307 0.8377301925469376 0.8771050712050134 0.9423344401083341 1.003172029356735 1.232842611321371 1.1262929065229523 0.7630766001757063 1.0 18.279959814698334 -6.519459444646022 24.950361541025227 1.052067401651615 0.9436629651853262 0.09024012329884679 0.12575671045440603 300.0488344239611 2189469.6437632022 0.049047406472302685 0.03880707469525239 3.0237129181519134e-07 6.519459444646022 -0.10840443646628872 LPSPEPSMS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 LPSPEPSMSPK 11 0 O43303-2;O43303 O43303-2 CCP110 Centriolar coiled-coil protein of 110 kDa 1 LPSPEPS(0.003)MS(0.997)PK;LPSPEPSMS(1)PK 132.79 0.00012982 1181580000.0 1771860.0 1702920.0 1409800.0 1092790.0 1185290.0 1581520.0 1239940.0 1501400.0 1633510.0 1690780.0 True False 1673571.393684661 1621109.1670649662 1500677.9637597562 1196648.4330407074 1278565.5796224265 1571649.1470449432 1365285.2358482375 1496191.9938293926 1336905.7614360682 1675801.004606935 0.9986695252502269 0.9673637637215781 0.8954989044846321 0.714075495688932 0.7629578787144352 0.9378495076231196 0.8147060612178533 0.8928219936115445 0.7977711898732536 1.0 20.676419413640975 -4.853779669998673 3.5568124179430134 0.8384516308466264 0.9861332865807841 0.3131754142050619 0.07952850203579552 0.24997222678787623 6.085704776661822 0.021091413336317266 0.05121301464858371 1.400297553361754e-05 4.853779669998673 0.1476816557341577 LPSPS(ph)MDK ddPTM_KYSE-520_SHP099_60min_R1 1 LPSPSMDK 8 0 D6RAU9;Q9NQ86-4;Q9NQ86 D6RAU9 TRIM36 E3 ubiquitin-protein ligase TRIM36 1 LPS(0.274)PS(0.726)MDK 96.665 0.0071181 0.0 468110.0 409220.0 333140.0 387460.0 402370.0 501490.0 406720.0 493230.0 460170.0 516500.0 True False 442143.00514585036 389560.4569482576 354614.7374428464 424284.0819059036 434034.2298278704 498360.0148917297 447835.2268046801 491519.1002507476 376614.7279416935 511924.21183091955 0.8636884033371002 0.7609729095542822 0.6927094465302807 0.8288025299456591 0.8478486068778185 0.973503505742233 0.8748076696802005 0.9601403662718117 0.7356845393084931 1.0 18.96557071569941 -5.7623226012270345 2.5276880841879152 0.9036299499020579 0.7718652936588926 0.3436878809433197 0.07967724476645639 0.3098113546848551 4.056390463846673 0.025328548293919277 0.032022367372834835 1.728531899721561e-06 5.7623226012270345 -0.13176465624316536 LPSPS(ph)MDKIDR ddPTM_KYSE-520_SHP099_60min_R1 1 LPSPSMDKIDR 11 1 D6RAU9;Q9NQ86-4;Q9NQ86 D6RAU9 TRIM36 E3 ubiquitin-protein ligase TRIM36 1 LPS(0.398)PS(0.602)MDKIDR 108.09 0.00033281 390320000.0 400610.0 365250.0 346670.0 339330.0 344920.0 363720.0 330180.0 374800.0 460770.0 401600.0 True False 378387.3647037643 347702.8417485726 369016.9028916114 371579.8211767153 372063.241673656 361449.8885649165 363557.816646266 373499.9062789777 377105.7830664625 398042.13644007227 0.9506213791532417 0.8735327492166685 0.9270799975900772 0.9335188090888438 0.934733304873798 0.9080694114386431 0.9133651524880755 0.9383426328162381 0.947401665660686 1.0 18.60256163589776 -8.143594338662414 1.2285335869833076 0.9997246544172579 0.9192883986205632 0.5982115066728063 0.019656127296043175 0.4358245336974971 1.3719105441413406 0.0184092505324566 0.0056745054320607525 7.184650744350091e-09 8.143594338662414 -0.08043625579669467 LPSPTS(ph)PFSSLSQDQAATSK ddPTM_KYSE-520_SHP099_60min_R1 1 LPSPTSPFSSLSQDQAATSK 20 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDG6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 LPS(0.159)PT(0.062)S(0.679)PFS(0.096)S(0.003)LS(0.001)QDQAATSK 205.72 1.1200000000000002e-16 0.0 201320.0 258340.0 192830.0 144130.0 188410.0 272600.0 183030.0 274780.0 277730.0 261880.0 True False 190152.37827852945 245928.9586237544 205260.13033890884 157828.07186573546 203236.79509374226 270898.6022841645 201532.45860066035 273826.8523141342 227301.23300355606 259559.946939557 0.7325952271164923 0.9474842383174905 0.790800478884006 0.6080601946743672 0.7830052266926586 1.0436841487999222 0.7764389728727701 1.0549657431464166 0.8757176740234388 1.0 17.985708250648145 -6.181267329580894 8.827484973267254 0.942600341326292 0.7735160096120728 0.4004442909641722 0.10858039323031146 0.4347489113039854 44.880533770570075 0.036081554543100275 0.036090957657454535 6.587682661962708e-07 6.181267329580894 -0.16908433171421922 LPSS(ph)PLGCR ddPTM_KYSE-520_SHP099_60min_R1 8 LPSSPLGCR 9 0 Q8NCD3;C9JWC4;Q8NCD3-3;Q8NCD3-2 Q8NCD3 HJURP Holliday junction recognition protein 1 LPS(0.191)S(0.809)PLGCR;LPS(0.023)S(0.977)PLGCR;LPS(0.006)S(0.994)PLGCR;LPS(0.203)S(0.797)PLGCR;LPSS(1)PLGCR;LPS(0.182)S(0.818)PLGCR;LPS(0.169)S(0.831)PLGCR;LPS(0.039)S(0.961)PLGCR 163.65 0.00012379 9139110000.0 10174710.0 9164130.0 8302570.0 6163580.0 7669830.0 8800180.0 7635390.0 7699750.0 8576690.0 9291310.0 True False 9610298.553518467 8723871.439160436 8837766.946781697 6749364.790052108 8273401.985636839 8745254.812358964 8407249.735425333 7673041.3643851625 7019379.296760417 9208996.221929807 1.043577206670258 0.9473205579546096 0.9596884105279482 0.7329099314841213 0.8984043196733 0.9496425670729982 0.9129387756077868 0.8332114792395067 0.762230663103634 1.0 23.134612480845465 -5.023132208583504 24.295600430490015 0.8674926341408205 0.9849628500011647 0.30695810555676095 0.07908733558905938 633.2764735726279 665127.4322936606 0.021638831719437628 0.03783963374978883 9.481297882585043e-06 5.023132208583504 0.11747021586034423 LPSS(ph)PVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 22 LPSSPVYEDAASFK 14 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 LPS(0.021)S(0.979)PVYEDAASFK;LPSS(1)PVYEDAASFK;LPS(0.003)S(0.997)PVYEDAASFK;LPS(0.001)S(0.999)PVYEDAASFK;LPSS(1)PVYEDAASFK;LPS(0.023)S(0.977)PVYEDAASFK;LPS(0.001)S(0.999)PVYEDAASFK;LPS(0.001)S(0.999)PVYEDAASFK;LPS(0.035)S(0.965)PVYEDAASFK;LPS(0.038)S(0.962)PVYEDAASFK;LPSS(1)PVYEDAASFK;LPSS(1)PVYEDAASFK;LPSS(1)PVYEDAASFK;LPSS(1)PVYEDAASFK;LPS(0.015)S(0.985)PVYEDAASFK;LPS(0.028)S(0.972)PVYEDAASFK;LPS(0.141)S(0.859)PVYEDAASFK;LPS(0.056)S(0.944)PVYEDAASFK;LPS(0.001)S(0.999)PVYEDAASFK;LPSS(1)PVYEDAASFK;LPS(0.165)S(0.835)PVYEDAASFK;LPSS(1)PVYEDAASFK 388.0 1.6651999999999998e-81 551418560000.0 56108679.0 52125588.0 40668341.0 40889829.0 40979526.0 56161499.0 48888479.0 58255205.0 58206172.0 59489404.0 True False 52996218.72599148 49621396.51037729 43289887.33250624 44775986.05418459 44204381.554591954 55810974.252690755 53830603.56289553 58053131.29072199 47637398.42299016 58962374.16261593 0.8988141925871229 0.8415773146027568 0.7341951192995454 0.7593993065932889 0.7497049123679788 0.9465523572501722 0.9129653330178465 0.984579269664646 0.8079287698220575 1.0 25.81329128097275 -6.268185410407167 24.949317548271452 0.928351367314796 0.7936802368326084 0.5070477142971848 0.06584791984612072 455.4310978347079 1684348.0546422384 0.023301592569434797 0.02101424455430627 5.39280342051888e-07 6.268185410407167 -0.1346711304821876 LPSSPVY(ph)EDAASFK ddPTM_KYSE-520_SHP099_60min_R1 2 LPSSPVYEDAASFK 14 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 LPSS(0.008)PVY(0.992)EDAASFK;LPSS(0.001)PVY(0.999)EDAASFK 199.19 2.8844e-12 209321000.0 591730.0 577730.0 485030.0 373530.0 434140.0 519970.0 408450.0 553950.0 573280.0 592620.0 True False 558905.5573154894 549974.9836095909 516295.809875439 409030.1788941101 468304.34808129666 516724.67435692204 449740.11208785296 552028.4767429022 469186.80321275606 587369.8478513837 0.951539408023722 0.9363350631998146 0.878996107416927 0.6963758531193839 0.7972904121557615 0.8797262512659038 0.7656847108053224 0.9398311451672888 0.7987927962748773 1.0 19.16390968243565 -9.976227281715229 13.895450241858992 0.9999985235592982 0.8478810231740908 0.2425429286951949 0.07980312285027151 0.0 0.0 0.08085490458526119 0.01961019482083939 1.0562645838006377e-10 9.976227281715229 -0.15211750038520744 LPSTS(ph)GSEGVPFR ddPTM_KYSE-520_SHP099_60min_R1 2 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 LPS(0.001)T(0.026)S(0.689)GS(0.284)EGVPFR;LPS(0.001)T(0.014)S(0.743)GS(0.242)EGVPFR 147.26 0.00020746 0.0 448840.0 442540.0 440050.0 445130.0 472170.0 417160.0 447580.0 517350.0 532770.0 474910.0 True False 423941.9504596427 421279.71413391765 468416.3271048941 487435.0213667854 509327.0927201959 414556.3497023545 492825.75435985194 515555.4336003974 436032.3980387587 470702.6668743892 0.9006576344144126 0.8950017575454687 0.9951427091231985 1.0355476092869924 1.0820569513707767 0.8807180814486063 1.0470001320204256 1.0952889581523817 0.9263435895406079 1.0 18.844456501408224 -4.803480310395267 4.539016303321552 1.0127884645918335 0.8963216805228091 0.33490459111724546 0.06201985966590331 0.20503016443247518 9.181928013738453 0.016288701864858462 0.03836998411676311 1.5722430716160928e-05 4.803480310395267 -0.11646678406902433 LPSTSDDCPAIGT(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 8 LPSTSDDCPAIGTPLR 16 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR;LPSTSDDCPAIGT(1)PLR 231.37 1.81e-18 4431520000.0 2161890.0 2376770.0 1695530.0 1689300.0 1777120.0 2674560.0 2145070.0 2598860.0 2685350.0 2849870.0 True False 2041965.6520791298 2262586.4015955 1804826.5767439173 1849850.5640934352 1916969.2335703573 2657867.0789623414 2361914.6094657616 2589845.1612384818 2197758.1321646883 2824622.3689653086 0.7229163354771296 0.8010226168478269 0.6389620773997644 0.6549019027881793 0.6786639002198955 0.9409636870984451 0.8361877451005806 0.9168819130279604 0.7780714888871153 1.0 21.42962657213069 -6.254855904943293 24.99941255372024 0.8855865114785274 0.6991270538003095 0.6634891440035984 0.06933921716578935 341.05746841140774 1295097.548885228 0.023000060618437707 0.02248680951957944 5.560887319736867e-07 6.254855904943293 -0.18645945767821792 LPSTSGS(ph)EGVPFR ddPTM_KYSE-520_SHP099_60min_R1 1 LPSTSGSEGVPFR 13 0 P29317 P29317 EPHA2 Ephrin type-A receptor 2 1 LPS(0.029)T(0.029)S(0.029)GS(0.912)EGVPFR 75.08800000000001 0.015886 196550000.0 553630.0 564850.0 545280.0 508200.0 534500.0 588260.0 462980.0 540290.0 669120.0 521660.0 True False 522919.040265957 537713.7581428651 580429.6212788476 556499.1752040986 576562.1091110092 584588.4511360328 509782.53664936835 538415.8600946341 547624.6751425463 517038.49824533815 1.011373509014465 1.039987853840076 1.1226042610920433 1.0763205778538294 1.1151241369214768 1.1306478204619916 0.9859663030497842 1.041345783576743 1.0591564786781018 1.0 18.979912180818037 -6.766094319903509 24.99999898383222 1.0250626301439816 1.0837368769537703 0.3647926657425099 0.039352390906085694 149.428881795103 802519.05218304 0.01713915956551498 0.011991254448358649 1.7135851113576333e-07 6.766094319903509 0.05867424680978872 LPT(ph)PTSSVPAQK ddPTM_KYSE-520_SHP099_60min_R1 1 LPTPTSSVPAQK 12 0 Q9BTA9-2;Q9BTA9;Q9BTA9-3 Q9BTA9-2 WAC WW domain-containing adapter protein with coiled-coil 1 LPT(0.994)PT(0.004)S(0.001)S(0.001)VPAQK 111.79 0.00082805 538920000.0 413170.0 519900.0 379100.0 267570.0 338550.0 490220.0 335890.0 466410.0 515400.0 483580.0 True False 390250.63646602456 494923.2236141906 403537.3925814464 292999.77235214616 365191.9589139978 487160.35514212406 369845.0391704961 464792.1325709127 421816.3521766925 479295.85741954687 0.8142165854866185 1.032604843026975 0.8419379936935569 0.6113129663369314 0.7619343110539982 1.016408440842611 0.7716424697715589 0.969739515532807 0.8800751052756539 1.0 18.870556945155 -6.243682912277902 24.894601393329 0.9159361725276653 0.8151042197880577 0.19430244359804594 0.11599490436440442 1662.7694177490514 2331206.5456047156 0.041033124006006755 0.040949951083532866 5.705807134606698e-07 6.243682912277902 -0.10083195273960766 LPT(ph)S(ph)AS(ph)WWPSGK ddPTM_KYSE-520_SHP099_60min_R1 1 LPTSASWWPSGK 12 0 Q96CN9 Q96CN9 GCC1 GRIP and coiled-coil domain-containing protein 1 3 LPT(1)S(1)AS(1)WWPSGK 101.56 0.0027759 848910000.0 1565300.0 1322300.0 1382000.0 1294100.0 1816800.0 1619600.0 1286300.0 1309500.0 1385400.0 1544000.0 True False 1478469.6886518102 1258774.7231872352 1471085.9312781803 1417090.8749146487 1959771.82382204 1609491.4756398823 1416331.7570782364 1304957.6501395965 1133846.2830919486 1530321.3612138242 0.9661171346906599 0.8225558076172949 0.9612921629162522 0.9260086873456677 1.280627633837368 1.051734306553273 0.9255126360876429 0.8527343884846036 0.7409203790977612 1.0 20.545403214102432 -7.037726249728399 3.776723018194418 0.8503582707634846 1.0004317736922754 0.193349372285184 0.124795284773121 0.39231252777763664 11.73330508483719 0.06611967764507073 0.03827081339918865 9.167981964567514e-08 7.037726249728399 0.15007350292879085 LPVDSVFNKFEDEDS(ph)DDVPR ddPTM_KYSE-520_SHP099_60min_R1 11 LPVDSVFNKFEDEDSDDVPR 20 1 P49756 P49756 RBM25 RNA-binding protein 25 1 LPVDS(0.044)VFNKFEDEDS(0.956)DDVPR;LPVDS(0.025)VFNKFEDEDS(0.975)DDVPR;LPVDSVFNKFEDEDS(1)DDVPR;LPVDSVFNKFEDEDS(1)DDVPR;LPVDSVFNKFEDEDS(1)DDVPR;LPVDS(0.001)VFNKFEDEDS(0.999)DDVPR;LPVDSVFNKFEDEDS(1)DDVPR;LPVDSVFNKFEDEDS(1)DDVPR;LPVDSVFNKFEDEDS(1)DDVPR;LPVDSVFNKFEDEDS(1)DDVPR;LPVDSVFNKFEDEDS(1)DDVPR 173.35 2.6828000000000003e-09 3368797000.0 2122083.0 2066769.0 1922158.0 1900733.0 1960336.0 1953807.0 1785067.0 1844266.0 2286021.0 1940358.0 True False 2004366.825722417 1967478.3149564846 2046063.3802415403 2081378.0928437854 2114603.2904139156 1941612.565785094 1965518.9929350645 1837868.6717009183 1870937.2122997977 1923167.9376956804 1.0422214235351845 1.023040305733204 1.0639026057667704 1.0822653872535286 1.0995416723448557 1.0095907526991708 1.02202150649939 0.9556464808284154 0.972841308149893 1.0 20.875053318638457 -6.7704717403951555 1.8751683249309616 0.9758206198176415 1.0599061001662407 0.6561511917669818 0.025564671829303717 0.21793211225269468 1.5673579974562295 0.014277943038278099 0.00891275805237176 1.696399983661435e-07 6.7704717403951555 0.0840854803485992 LQAALDDEEAGGRPAMEPGNGS(ph)LDLGGDSAGR ddPTM_KYSE-520_SHP099_60min_R1 14 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(0.994)LDLGGDS(0.006)AGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR;LQAALDDEEAGGRPAMEPGNGS(1)LDLGGDSAGR 265.7 1.145e-41 17029360000.0 6786620.0 6918720.0 6177290.0 5140300.0 5417950.0 6306260.0 5503420.0 6408020.0 7627220.0 6434180.0 True False 6410152.659808443 6586334.3059895625 6575487.997413456 5628832.566512455 5844311.841081363 6266900.292151634 6059759.401803248 6385792.074263118 6242309.114569485 6377178.170916289 1.005170702152017 1.0327975994189953 1.031096798800695 0.8826525487688688 0.9164416744281801 0.9827074176369122 0.9502258270655415 1.001350739012768 0.9788512955523359 1.0 22.60448675830072 -5.149783693952532 21.77314717525145 0.9577188411597042 1.02400496498032 0.4055654523383897 0.03555305437659977 9.475632852381088 1833.5462898314297 0.010244508912550646 0.01774401685693879 7.082984738657954e-06 5.149783693952532 0.06628612382061583 LQAALDDEEAGGRPAMEPGNGSLDLGGDS(ph)AGR ddPTM_KYSE-520_SHP099_60min_R1 2 LQAALDDEEAGGRPAMEPGNGSLDLGGDSAGR 32 1 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 LQAALDDEEAGGRPAMEPGNGS(0.001)LDLGGDS(0.999)AGR;LQAALDDEEAGGRPAMEPGNGS(0.002)LDLGGDS(0.998)AGR 203.64 3.7851e-16 1599270000.0 1154590.0 1130760.0 1034200.0 982710.0 996820.0 1087450.0 977480.0 1145190.0 1332150.0 1036190.0 True False 1090542.5910818966 1076436.5922946366 1100866.1867785058 1076106.4629374645 1075264.0628700382 1080662.8211809052 1076293.2176854815 1141217.6031793559 1090265.1407686856 1027010.1627436202 1.0618615381259244 1.0481265242974573 1.071913625311732 1.0478050772766312 1.046984832163208 1.0522416042057012 1.047986920411969 1.1112038074975175 1.0615913847006948 1.0 19.970019027189903 LQAKES(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 12 LQAKESPQR 9 1 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR;LQAKES(1)PQR 145.95 0.00052456 70828040000.0 29090890.0 29818680.0 27861730.0 21359210.0 24140840.0 23839360.0 19996920.0 20600240.0 31444990.0 21833680.0 True False 27477160.340448514 28386145.854048856 29657741.696144205 23389182.89651937 26040586.76540956 23690569.711478435 22018403.824732095 20528782.575572148 25735372.47969071 21640250.581546023 1.2697246844211676 1.3117290738886116 1.3704897540066006 1.0808184872158906 1.2033403526119968 1.0947456279309835 1.0174745316261977 0.9486388569399611 1.1892363437619733 1.0 24.367213869044505 -5.678191607207359 0.9812547489494131 1.0387420189235055 1.323218185329144 0.6326088603550037 0.08175318415772313 0.3558660608228033 0.7262022975210145 0.03680003598546027 0.06383052986292688 2.098014052599186e-06 5.678191607207359 0.28447616640563855 LQAKES(ph)PQRK ddPTM_KYSE-520_SHP099_60min_R1 5 LQAKESPQRK 10 2 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 LQAKES(1)PQRK;LQAKES(1)PQRK;LQAKES(1)PQRK;LQAKES(1)PQRK;LQAKES(1)PQRK 114.79 0.0007986000000000001 8464490000.0 8192590.0 8075290.0 8575760.0 6578460.0 6373390.0 6076670.0 5479820.0 5260380.0 9064980.0 5148630.0 True False 7738130.701176727 7687340.947142593 9128567.211301142 7203674.860513875 6874939.533371399 6038743.24850371 6033773.683489432 5242132.969561917 7419008.141549618 5103017.143773525 1.516383442022814 1.5064305548184067 1.7888568574454848 1.4116501390365657 1.3472303423005143 1.1833672273415574 1.182393378954561 1.0272614850918411 1.4538473872465747 1.0 22.28291905784175 -5.825548987859721 1.7832339410995555 1.1715319764937158 1.5920152070801206 0.6377274470294689 0.140019349001715 0.2186179011947656 1.4344818227026501 0.04881201268736238 0.061430886937310615 1.4943454726095419e-06 5.825548987859721 0.4204832305864048 LQALVNSLCAGQS(ph)P ddPTM_KYSE-520_SHP099_60min_R1 2 LQALVNSLCAGQSP 14 0 Q6XQN6-3;Q6XQN6;Q6XQN6-2 Q6XQN6-3 NAPRT Nicotinate phosphoribosyltransferase 1 LQALVNSLCAGQS(1)P;LQALVNSLCAGQS(1)P 188.09 1.0562e-10 1440960000.0 579360.0 640800.0 541910.0 364730.0 449010.0 632790.0 433160.0 587000.0 698150.0 631750.0 True False 547221.7458744732 610015.006139591 576842.3856866572 399393.8295399268 484344.5324825704 628840.5228884674 476948.04003421374 584963.8340068299 571383.5589292931 626153.1864940622 0.873942283897748 0.974226466138691 0.9212480238525902 0.6378532253044986 0.773524024040343 1.0042918194019774 0.7617114315184222 0.9342184095271343 0.9125299866771683 1.0 19.256156125779125 -7.897908267952971 1.235282854275816 0.9969703450681966 0.8515087400314529 0.16346568969299025 0.10364865489420749 0.8799131695639801 2.9751218496187497 0.10380641603107757 0.032729838116757407 1.2650035143645656e-08 7.897908267952971 -0.14546160503674366 LQAYLEEHAEEEANEEDVLGDET(ph)EEEETKPIELPVK ddPTM_KYSE-520_SHP099_60min_R1 3 LQAYLEEHAEEEANEEDVLGDETEEEETKPIELPVK 36 1 H0YHG0;F8VZQ9;P82979 H0YHG0 SARNP SAP domain-containing ribonucleoprotein 1 LQAYLEEHAEEEANEEDVLGDET(0.823)EEEET(0.177)KPIELPVK;LQAYLEEHAEEEANEEDVLGDET(0.972)EEEET(0.028)KPIELPVK;LQAYLEEHAEEEANEEDVLGDET(0.999)EEEET(0.001)KPIELPVK 213.61 3.9511e-22 289074000.0 179562.0 206280.0 131386.0 162758.0 147481.0 158476.0 153809.0 184759.0 177478.0 159493.0 True False 169601.33791202723 196369.99916740775 139855.3517850326 178226.47138502295 159086.91564789665 157486.89250031268 169357.5147511829 184118.11415207482 145252.46905629628 158080.0161036765 1.0728828481444137 1.2422189977423765 0.8847124085141079 1.1274446687058373 1.0063695561845072 0.9962479532961661 1.0713404447030805 1.1647146722917923 0.918854088179196 1.0 17.270295473439987 -4.742815042697132 24.99490409365248 1.0312559832476107 1.1575508508644738 0.2657636712633419 0.0894084642490997 329.3409011999259 441987.13221448346 0.02149029072617587 0.05663629081690273 1.8079439291085703e-05 4.742815042697132 0.12629486761686315 LQAYLEEHAEEEANEEDVLGDET(ph)EEEETKPIELPVKEEEPPEK ddPTM_KYSE-520_SHP099_60min_R1 8 LQAYLEEHAEEEANEEDVLGDETEEEETKPIELPVKEEEPPEK 43 2 H0YHG0;F8VZQ9;P82979 H0YHG0 SARNP SAP domain-containing ribonucleoprotein 1 LQAYLEEHAEEEANEEDVLGDET(0.988)EEEET(0.012)KPIELPVKEEEPPEK;LQAYLEEHAEEEANEEDVLGDET(0.998)EEEET(0.002)KPIELPVKEEEPPEK;LQAYLEEHAEEEANEEDVLGDET(1)EEEETKPIELPVKEEEPPEK;LQAYLEEHAEEEANEEDVLGDET(0.999)EEEET(0.001)KPIELPVKEEEPPEK;LQAYLEEHAEEEANEEDVLGDET(0.965)EEEET(0.035)KPIELPVKEEEPPEK;LQAYLEEHAEEEANEEDVLGDET(0.995)EEEET(0.005)KPIELPVKEEEPPEK;LQAYLEEHAEEEANEEDVLGDET(0.999)EEEET(0.001)KPIELPVKEEEPPEK;LQAYLEEHAEEEANEEDVLGDET(0.988)EEEET(0.012)KPIELPVKEEEPPEK 289.72 5.9067e-54 8267640000.0 2252235.0 2344126.0 2068943.0 1986040.0 1858288.0 1874599.0 1939118.0 2352134.0 2698896.0 2100845.0 True False 2127299.034830838 2231510.66835514 2202310.3762058457 2174792.644475301 2004524.693387611 1862898.9322938062 2135142.9714079415 2343974.9961461998 2208844.5200315597 2082233.1477326779 1.021643055268442 1.0716910691701402 1.0576675232569026 1.0444520330700766 0.9626802337530345 0.8946639497706093 1.025410134178719 1.1257024693409237 1.0608055694612044 1.0 20.989700185630017 -9.723763919074626 7.523797155935398 0.9999978623223298 1.0287181036573103 0.021192534432410093 0.059799991016533015 0.0 0.0 0.06524269401829323 0.015823677572780977 1.889017933432226e-10 9.723763919074626 0.028720241334980523 LQDYEEK ddPTM_KYSE-520_SHP099_60min_R1 3 LQDYEEK 7 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ;; 137.9 0.013144999999999999 693910000.0 1614390.0 1850010.0 1353150.0 1078410.0 1647220.0 1819640.0 1343230.0 1571930.0 1652230.0 1605380.0 False True 1524836.5684933225 1761132.742678378 1440376.2141165494 1180901.762164211 1776846.8426002539 1808282.951798816 1479016.7970614953 1566477.3417212206 1352226.6813288652 1591157.5821667404 0.9583190160316453 1.1068248440108464 0.9052379413955554 0.7421651855224368 1.116700735687444 1.1364574898586774 0.9295225147011908 0.9844891287185322 0.8498383167602332 1.0 20.60164529107266 -7.351635295529256 2.603483977748864 0.9287705582723853 0.9892178368782457 0.031516578054970434 0.1169770900932746 1.2367675758349728 15.941077343142565 0.08633914499189048 0.03470536451053273 4.450048092120427e-08 7.351635295529256 0.06044727860586041 LQEDKEQMAQQLAEETQGFQR ddPTM_KYSE-520_SHP099_60min_R1 2 LQEDKEQMAQQLAEETQGFQR 21 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 221.48 3.8813e-19 891790000.0 657350.0 587200.0 469240.0 540320.0 659720.0 545500.0 538600.0 586650.0 518370.0 463800.0 False True 620885.485105263 558990.0305948305 499487.96121054515 591671.850346869 711636.2107066698 542095.3321570496 593046.9442294472 584615.0480751398 424247.0750442998 459691.0928309397 1.3506580718839503 1.2160123163413348 1.0865730683066368 1.2871074936500189 1.5480748306958991 1.1792600305101313 1.2900988369760553 1.2717563102536409 0.9228960092127017 1.0 18.81030518659299 -7.756628570455344 24.98257228433603 0.9614479318265535 1.2765250150448764 0.5499831732494167 0.11477391911197551 84.356894204233 438084.3470856857 0.08712846359477612 0.03054894070650902 1.751343881882086e-08 7.756628570455344 0.31507708321832284 LQEDPNYS(ph)PQRFPNAQR ddPTM_KYSE-520_SHP099_60min_R1 6 LQEDPNYSPQRFPNAQR 17 1 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710;P46379-4;H0Y4L1 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 LQEDPNYS(1)PQRFPNAQR;LQEDPNYS(1)PQRFPNAQR;LQEDPNY(0.001)S(0.999)PQRFPNAQR;LQEDPNY(0.042)S(0.958)PQRFPNAQR;LQEDPNY(0.001)S(0.999)PQRFPNAQR;LQEDPNYS(1)PQRFPNAQR 154.49 4.2221e-06 4304010000.0 2610280.0 2440410.0 2407070.0 1932787.0 2082920.0 2177580.0 1830490.0 1968470.0 2619580.0 2135660.0 True False 2465482.564935825 2323169.040469909 2562233.5836481703 2116478.4953663987 2246833.9538063654 2163988.915487715 2015533.7930608252 1961641.8370143494 2143930.3062379127 2116739.7139183395 1.1647547162857923 1.0975223005427739 1.2104622815930297 0.9998765939193075 1.0614597246097897 1.0223216871014866 0.952187829144959 0.9267279411426145 1.0128455058223669 1.0 21.013412447774122 -5.646867686585703 0.9804310047775875 0.971536697835906 1.1582718482576564 0.680270576621302 0.04829845902780058 0.3231000573242086 0.6542217351571318 0.02140139779561902 0.03860937281410073 2.254926099826925e-06 5.646867686585703 0.18673515042175037 LQEEDKFDKEEYR ddPTM_KYSE-520_SHP099_60min_R1 2 LQEEDKFDKEEYR 13 2 Q13206;E9PIF2 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 0 ; 89.648 0.001853 885590000.0 1542600.0 1311620.0 830100.0 855620.0 1267180.0 1314990.0 964850.0 1169650.0 1061290.0 1123190.0 False True 1457028.9029031394 1248607.8064182429 883609.5742069596 936937.867548467 1366899.8567320646 1306782.6596392274 1062386.4540285587 1165592.7571483625 868586.4889437368 1113239.4104285983 1.3088190098679509 1.1215986379223923 0.7937282546139549 0.8416319605391486 1.2278579467518194 1.1738559086190767 0.9543198381914442 1.0470279314847541 0.780233326997766 1.0 20.08633245768724 -4.490137432633032 5.149671746668346 0.9870955162777096 1.2753027570551985 0.34450457853440786 0.1417010907274848 0.2335392715317561 16.099355576427108 0.038274959437406185 0.14477186111651472 3.2349127181018075e-05 4.490137432633032 0.2882072407774888 LQEES(ph)DLELAK ddPTM_KYSE-520_SHP099_60min_R1 3 LQEESDLELAK 11 0 O75822-3;O75822;O75822-2 O75822-3 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 LQEES(1)DLELAK;LQEES(1)DLELAK;LQEES(1)DLELAK 185.27 4.9074e-05 308920000.0 737380.0 629120.0 605790.0 519230.0 602980.0 590890.0 559990.0 616380.0 715510.0 624810.0 True False 696476.0614694137 598896.1308716284 644840.1926982698 568577.4630878076 650431.095513108 587202.0363304839 616599.2541757303 614241.9216441736 585591.420539281 619274.6694948239 1.124664217313405 0.967092891689209 1.0412830113401879 0.9181345388333536 1.050311158445573 0.9482093572622574 0.9956797598046823 0.991873157261937 0.9456085472008403 1.0 19.240219910413803 -4.256940968912912 24.896814641880912 0.9850021316267794 1.124664276722411 0.5334425059543284 0.03939104590588205 316.7800299896459 1753178.2120327177 0.00889849643131895 0.06900119052750237 5.5342532794385765e-05 4.256940968912912 0.13966214509563168 LQEKEDLQELNDR ddPTM_KYSE-520_SHP099_60min_R1 9 LQEKEDLQELNDR 13 1 P02545-3;P02545;P02545-2;P02545-6;Q3BDU5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ;;;;;;;; 179.56 2.2619e-07 8914230000.0 9781230.0 9583660.0 7306560.0 5288490.0 9065690.0 8665470.0 6144860.0 7391320.0 8574900.0 7677120.0 False True 9238645.673501398 9123246.588233067 7777552.548509337 5791106.499557508 9779108.226279851 8611385.587437108 6766042.416854367 7365681.236067063 7017914.315638184 7609106.689508971 1.2141564115849695 1.1989904939579452 1.0221374027036065 0.7610757393561028 1.2851847957083795 1.1317209678910174 0.8892032524899439 0.968008668642072 0.9223046281259413 1.0 22.859295660337672 -4.773378194311089 5.244340195538253 0.9980456031417186 1.2099472093077401 0.28704664823058057 0.13233232142692622 0.21761130536885673 17.261840609134122 0.03622975013875118 0.08658359616072728 1.685084972854643e-05 4.773378194311089 0.2119016061660215 LQEKLS(ph)PPYSSPQEFAQDVGR ddPTM_KYSE-520_SHP099_60min_R1 2 LQEKLSPPYSSPQEFAQDVGR 21 1 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LQEKLS(0.996)PPYS(0.002)S(0.002)PQEFAQDVGR;LQEKLS(0.997)PPYS(0.002)SPQEFAQDVGR 119.14 6.361600000000001e-05 613000000.0 163500.0 184166.0 162747.0 156507.0 142691.0 184456.0 130579.0 141657.0 200156.0 199677.0 True False 154430.32907083037 175318.3889211984 173237.9320244069 171381.37822445482 153919.9698992684 183304.74168352093 143779.19964823063 141165.62492999248 163812.715922154 197908.01712635506 0.780313659411957 0.8858579428304099 0.8753457011991715 0.8659648088689392 0.7777348898453046 0.926211804580354 0.7264950745094592 0.7132890672127992 0.8277214753638161 1.0 17.594470530653265 -6.766160926909244 24.999393489519104 0.7929838489016782 0.851781349973134 0.008991193667180708 0.08537124118559708 292.1775043641306 1546981.065447872 0.03328941657278549 0.023259720718840998 1.7133223218770823e-07 6.766160926909244 0.05879750107145587 LQELAS(ph)PPAGRPTPAPR ddPTM_KYSE-520_SHP099_60min_R1 7 LQELASPPAGRPTPAPR 17 1 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 LQELAS(1)PPAGRPTPAPR;LQELAS(1)PPAGRPTPAPR;LQELAS(1)PPAGRPTPAPR;LQELAS(1)PPAGRPTPAPR;LQELAS(1)PPAGRPTPAPR;LQELAS(0.797)PPAGRPT(0.203)PAPR;LQELAS(1)PPAGRPTPAPR 186.9 2.1063e-12 18901100000.0 3568030.0 3594880.0 3417150.0 2715320.0 2879710.0 3612530.0 3192450.0 3892130.0 4972270.0 4066180.0 True False 3370104.263208536 3422176.568775111 3637424.956633318 2973383.196409276 3106326.7936914163 3589982.8602700406 3515174.001309506 3878629.1094599687 4069431.108726435 4030156.8086401704 0.8362216219437018 0.84914228683072 0.9025517192867328 0.7377835001443868 0.7707707022793322 0.8907799449821779 0.8722176749483784 0.962401537613786 1.0097451047071084 1.0 21.942404542729122 -7.192669474979386 1.4178913941256683 1.0089668044474955 0.8251602507846764 0.7208231380667087 0.04533989061113744 0.2534620966321509 0.9233902016953569 0.03875822504116992 0.01563764179833199 6.416977625648602e-08 7.192669474979386 -0.18380655366281917 LQELESCSGLGS(ph)TSDDTDVR ddPTM_KYSE-520_SHP099_60min_R1 2 LQELESCSGLGSTSDDTDVR 20 0 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7;B4DGD8 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 LQELESCS(0.003)GLGS(0.959)T(0.037)S(0.002)DDTDVR;LQELESCSGLGS(0.966)T(0.03)S(0.003)DDTDVR 174.01 3.8249e-09 811800000.0 399300.0 378400.0 336470.0 328420.0 339310.0 482220.0 399410.0 486100.0 628640.0 532960.0 True False 377150.0330151847 360221.0960100203 358159.39457103435 359632.9380569262 366011.7665901899 479210.28610957303 439786.2606659555 484413.832556593 514494.8227247889 528238.3890366053 0.7139769483680016 0.6819290371284585 0.6780260617261102 0.6808156043198987 0.6928912668723636 0.9071856496146578 0.8325526311482819 0.9170364036586985 0.973982265210066 1.0 19.010829625733976 -6.624920386203939 0.8517892159722795 0.978937149791946 0.6743903736047873 0.8917447919271468 0.04133076386663794 0.19169833492981161 0.2817281529702764 0.03187939531676934 0.021096627065057768 2.3718084599036331e-07 6.624920386203939 -0.30454677618715875 LQELNAHIVVS(ph)DPEDITDCPR ddPTM_KYSE-520_SHP099_60min_R1 3 LQELNAHIVVSDPEDITDCPR 21 0 Q16513-3;Q16513-2;Q16513;B1AL79 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 LQELNAHIVVS(1)DPEDITDCPR;LQELNAHIVVS(1)DPEDITDCPR;LQELNAHIVVS(1)DPEDITDCPR 219.26 2.8271999999999996e-19 3943800000.0 1860940.0 1994720.0 1905000.0 1520340.0 1788300.0 2017940.0 1604230.0 1875030.0 2504540.0 1831770.0 True False 1757709.9485080817 1898890.657064241 2027799.34810777 1664832.6564931103 1929029.035964859 2005345.2879431637 1766401.2241760248 1868525.9585652906 2049778.6703155078 1815541.942895497 0.9681461534867201 1.0459084487113617 1.1169113200842702 0.9169893667330926 1.0625086594740787 1.1045436299560014 0.9729333057207697 1.0291835811764793 1.1290175246771996 1.0 20.791968829183233 -7.606195694989797 24.99999774642454 1.0693735854263775 1.0290170837594668 0.048221684261273046 0.06527453585421991 84.96322741210511 25484.81721885468 0.04287271016784151 0.01620436153881184 2.476305971912432e-08 7.606195694989797 -0.04035650166691074 LQEYKS(ph)ELDER ddPTM_KYSE-520_SHP099_60min_R1 1 LQEYKSELDER 11 1 R4GN29;Q8NF67;Q8IVF6 R4GN29 ANKRD18A;ANKRD20A12P Putative ankyrin repeat domain-containing protein 20A12 pseudogene;Ankyrin repeat domain-containing protein 18A 1 LQEYKS(1)ELDER 51.211000000000006 0.048506 419480000.0 303030.0 183900.0 207610.0 142110.0 258170.0 250440.0 232170.0 253970.0 299320.0 265040.0 True False 286220.3218246712 175065.1679604722 220992.87278774485 155616.09167307048 278486.5102136372 248876.91106399862 255640.00936084424 253089.03734704384 244971.03324316573 262691.9517979997 1.0895663908453652 0.6664276037474144 0.8412624417122613 0.5923900241631059 1.0601257796728503 0.9474097297635357 0.9731550875887582 0.9634442000022135 0.9325410678418474 1.0 18.00301247514064 -5.7866196444715845 24.999929739702054 0.9757018295800057 0.7911876161161056 0.33532934527277025 0.12536383913472438 251.54543111090118 249742.5907236506 0.037099050843942466 0.042082597946561745 1.634482802854603e-06 5.7866196444715845 -0.18451421346390018 LQFHDVAGDIFHQQCK ddPTM_KYSE-520_SHP099_60min_R1 4 LQFHDVAGDIFHQQCK 16 0 P11413;P11413-3;P11413-2 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ;;; 230.93 6.3259e-19 6026450000.0 7190770.0 6058050.0 3917210.0 3916140.0 7320300.0 6058390.0 4645310.0 4820190.0 5067060.0 4366630.0 False True 6791883.653655384 5767012.184681567 4169719.6243575984 4288328.768169581 7896365.963190495 6020577.340764332 5114903.268656694 4803469.885930805 4147009.634187881 4327945.05538673 1.5693091217047546 1.3325058684614581 0.9634409797249627 0.9908463978377358 1.8245069801342255 1.3910937555158853 1.181831840099376 1.1098731209519903 0.9581936880243779 1.0 22.04525075314134 -7.220575193825168 2.145325903158454 0.9979063889494451 1.3292717312161677 0.27123641718576486 0.23792297940619866 0.5295186261448649 4.626964470534725 0.17497589459794766 0.07578750882196238 6.017620646866368e-08 7.220575193825168 0.33136534226672265 LQGQLQGGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 LQGQLQGGSR 10 0 U3KQU7;Q9UP83-3;Q9UP83;Q9UP83-2 U3KQU7 COG5 Conserved oligomeric Golgi complex subunit 5 1 LQGQLQGGS(1)R 93.839 0.0043674 0.0 386490.0 363960.0 373030.0 305180.0 356950.0 342450.0 267150.0 328690.0 380950.0 315430.0 True False 365050.62925128604 346474.8152849021 397076.11066910333 334184.21544428694 385039.9342323187 340312.64252462244 294156.129132746 327549.8511068231 311779.08296800737 312635.53560082626 1.1676555851199957 1.1082387503360525 1.2700926972552826 1.0689258813846871 1.2315936302389456 1.088528346179861 0.9408915354661577 1.047705119244792 0.9972605397170448 1.0 18.25412224548505 -6.532890831462385 5.936460412761236 1.0013824013135901 1.1657312177325896 0.6620791645110248 0.05812241638504053 0.09476120693871783 12.610872425602919 0.020564345231963325 0.0164341552274134 2.9316300760425786e-07 6.532890831462385 0.16434881641899945 LQGQVS(ph)AK ddPTM_KYSE-520_SHP099_60min_R1 1 LQGQVSAK 8 0 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 LQGQVS(1)AK 99.568 0.002794 1003700000.0 1474500.0 1293500.0 1289900.0 1068000.0 1037200.0 1134400.0 1164700.0 1250700.0 1326800.0 1044500.0 True False 1392706.5456571246 1231358.318416918 1373049.0179129723 1169502.3988940904 1118821.7391392684 1127319.7888156848 1282439.2423766013 1246361.6136155748 1085886.5659061614 1035246.5426087044 1.345289733735948 1.1894348522179403 1.3263014764126078 1.1296849115255931 1.0807297518907564 1.0889384725448745 1.2387766484541927 1.2039273374194366 1.0489159067074494 1.0 19.98154295390146 -1.0000000000000002 0.171321380536173 1.0330778618479133 2.1511522212561975 0.5147499327685456 0.07659802925630749 58.20532471304048 0.6326632927640699 0.20891164783109942 16.72041756581004 0.09999999999999995 1.0000000000000002 1.1180743594082843 LQGS(ph)GVSLASK ddPTM_KYSE-520_SHP099_60min_R1 3 LQGSGVSLASK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LQGS(0.995)GVS(0.005)LASK;LQGS(0.989)GVS(0.011)LASK;LQGS(0.998)GVS(0.002)LASK 143.81 8.1387e-05 1685140000.0 2970810.0 2625030.0 2176830.0 2573200.0 2923900.0 2641030.0 2374250.0 2508450.0 2592950.0 2329180.0 True False 2806013.247137086 2498919.6185496403 2317151.944851147 2817756.154339208 3153994.2952847136 2624546.352129661 2614262.360447023 2499748.7724266327 2122135.642950244 2308545.277274617 1.2154898042328028 1.0824650671351668 1.0037281779401315 1.2205765172020997 1.366225876673384 1.1368832043130224 1.1324284544825234 1.0828242343930734 0.9192523377559908 1.0 21.138552597426845 -7.49138030838585 2.301889343591806 0.9604503180744022 1.166457644730448 0.43571896971032464 0.09235295086524126 0.33253348977066755 3.2661757711838613 0.08260633627861896 0.028136333513437816 3.2256681913857127e-08 7.49138030838585 0.20600732665604582 LQGSGVSLAS(ph)KK ddPTM_KYSE-520_SHP099_60min_R1 1 LQGSGVSLASKK 12 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 LQGSGVSLAS(1)KK 80.361 0.006377600000000001 781130000.0 654060.0 488790.0 428360.0 492610.0 560330.0 533250.0 502940.0 593270.0 539310.0 557130.0 True False 617777.987963715 465307.79471125273 455972.77100023325 539427.506291403 604424.7831584121 529921.7889509562 553782.0834213855 591212.0848402588 441384.89889874286 552194.2616405815 1.1187693007317439 0.8426523544971526 0.8257470290356295 0.9768799565007281 1.0945872225521731 0.9596655122357605 1.0028754767861703 1.0706595955628992 0.7993290216152888 1.0 19.074816370067083 -4.227377299776142 22.863271049826025 0.9577376130304291 1.1187703139242016 0.2122570436840845 0.09562023389372037 8652.691677214754 5807572.990400761 0.024697459042458823 3.5656286374784356 5.924104355962862e-05 4.227377299776142 0.16103270089377242 LQILT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 LQILTPR 7 0 O15231-3;O15231-2;O15231;O15231-6 O15231-3 ZNF185 Zinc finger protein 185 1 LQILT(1)PR;LQILT(1)PR;LQILT(1)PR 102.55 0.021851 1208230000.0 1980930.0 2042960.0 1698850.0 1251730.0 1303660.0 1713380.0 1362400.0 1673980.0 2018800.0 1860240.0 True False 1871043.8640139466 1944813.1350545215 1808360.5892561057 1370694.0428536513 1406250.6251892552 1702686.1598739605 1500124.6877426654 1668173.3540898704 1652236.8098065716 1843759.7208448185 1.0147981013256036 1.0548083424685077 0.9808005722283093 0.7434233579121652 0.7627081822488807 0.9234859296599572 0.8136226596030105 0.9047672184342471 0.8961237145637988 1.0 20.814219225019652 -5.05434071504155 7.164013620921346 0.8557730688310475 1.0310230908805946 0.4882363013020975 0.07302270979492595 0.1909184822210282 21.82559343344335 0.01989287211177647 0.03514619693417068 8.823873735159573e-06 5.05434071504155 0.1752500220495471 LQINS(ph)PPFDQPMSR ddPTM_KYSE-520_SHP099_60min_R1 6 LQINSPPFDQPMSR 14 0 Q00537;F5H6Z0;Q00537-2;F8VQZ9 Q00537 CDK17 Cyclin-dependent kinase 17 1 LQINS(1)PPFDQPMSR;LQINS(1)PPFDQPMSR;LQINS(1)PPFDQPMSR;LQINS(1)PPFDQPMSR;LQINS(1)PPFDQPMSR;LQINS(1)PPFDQPMSR 177.88 3.7080000000000005e-08 4250321000.0 3859520.0 4066690.0 3615740.0 3204550.0 3395950.0 4195710.0 3921830.0 4537040.0 5339670.0 4846810.0 True False 3645424.7318376275 3871320.1081738626 3848816.385788549 3509109.468516914 3663191.9446876165 4169523.017570401 4318286.849772323 4521302.067193101 4370120.530126736 4803871.034161125 0.7588514982842808 0.8058751121011081 0.8011906144896431 0.7304753694599737 0.7625500182328063 0.8679506564435702 0.8989181472742018 0.9411789023979559 0.9097081289339539 1.0 22.19576598996105 -6.583301886909989 1.8078079806635325 0.9406547373946971 0.7725448651153575 0.8628451346395163 0.031339662199707526 0.12976118208724066 0.8610420153550838 0.015376565485702225 0.011078052267727522 2.6103462189600906e-07 6.583301886909989 -0.1681098722793396 LQIQCVVEDDKVGTDLLEEEITK ddPTM_KYSE-520_SHP099_60min_R1 4 LQIQCVVEDDKVGTDLLEEEITK 23 1 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;E9PQZ1;H0YE72;H0YE58 P29692-2 EEF1D Elongation factor 1-delta 0 ;;; 217.94 6.7088e-21 711661000.0 771986.0 890805.0 304800.0 639361.0 344365.0 691177.0 471054.0 1151943.0 621436.0 621897.0 False True 729162.3976640624 848009.3906744355 324447.8956972427 700125.6772091051 371464.56633117417 686863.1079639102 518672.7353640137 1147947.1785985176 508598.88752672746 616387.4764085445 1.1829610846615746 1.375773232148492 0.5263700320254352 1.1358531832743768 0.6026478157790567 1.1143365727772414 0.8414718910029169 1.8623791406132542 0.8251285222245913 1.0 19.23347802430568 LQIS(ph)TPDIK ddPTM_KYSE-520_SHP099_60min_R1 10 LQISTPDIK 9 0 O14896;O14896-2 O14896 IRF6 Interferon regulatory factor 6 1 LQIS(0.913)T(0.087)PDIK;LQIS(0.932)T(0.068)PDIK;LQIS(0.959)T(0.041)PDIK;LQIS(0.796)T(0.204)PDIK;LQIS(0.737)T(0.263)PDIK;LQIS(0.966)T(0.034)PDIK;LQIS(0.943)T(0.057)PDIK;LQIS(0.862)T(0.138)PDIK;LQIS(0.937)T(0.063)PDIK;LQIS(0.923)T(0.077)PDIK 202.05 1.6055000000000001e-06 6572633000.0 12700570.0 9796080.0 7522860.0 7664740.0 8855290.0 9720230.0 9108860.0 11249730.0 11940010.0 9053710.0 True False 11996044.064141398 9325461.61258414 8007795.592601582 8393194.585111897 9552150.943292098 9659562.439033752 10029672.462706733 11210707.312336726 9772005.167157989 8973501.173079787 1.336829831830762 1.0392221979710912 0.8923825202836893 0.9353310846262782 1.064484280890077 1.0764541345369327 1.1176989080689514 1.2493125142690664 1.0889846648121793 1.0 23.097239557759416 -6.575796989315168 2.467942790255548 1.1350546397310688 1.0380629448636445 0.033299060688538606 0.12459081250420036 0.7321930585105936 9.037690402501427 0.05609418974646985 0.04229743313835982 2.6558467457633306e-07 6.575796989315168 -0.09699169486742432 LQIS(ph)TPDIKDNIVAQLK ddPTM_KYSE-520_SHP099_60min_R1 3 LQISTPDIKDNIVAQLK 17 1 O14896;O14896-2 O14896 IRF6 Interferon regulatory factor 6 1 LQIS(0.5)T(0.5)PDIKDNIVAQLK;LQIS(0.942)T(0.058)PDIKDNIVAQLK;LQIS(0.863)T(0.137)PDIKDNIVAQLK 161.8 2.9422999999999998e-08 4330550000.0 1267860.0 1355090.0 1072650.0 867950.0 985370.0 1071830.0 879250.0 1044980.0 1621760.0 893400.0 True False 1197529.2783837505 1289989.4423684415 1141794.7353006827 950439.707041317 1062913.0130116267 1065140.31139485 968133.1706530672 1041355.2082801654 1327289.2652426711 885485.1710546829 1.35239902093154 1.4568165391544186 1.2894566421035767 1.0733547416827638 1.200373589255722 1.2028889316420552 1.0933364016699951 1.176027834593581 1.4989401388413592 1.0 19.756108621250245 -4.991610004600591 5.653328526559515 1.1831000662150801 1.3999780568395674 0.3419597866175239 0.12638578992126198 0.1764580919083277 19.930957472033814 0.033077973846083984 0.06662343741891202 1.019506491487702e-05 4.991610004600591 0.21687799062448732 LQIT(ph)PDSNGEQFSSLIQR ddPTM_KYSE-520_SHP099_60min_R1 2 LQITPDSNGEQFSSLIQR 18 0 A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5;Q96PU5-3;K7ERN1 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 LQIT(0.817)PDS(0.183)NGEQFSSLIQR;LQIT(1)PDSNGEQFSSLIQR 248.94 3.0235e-23 1045330000.0 236650.0 349420.0 263530.0 200041.0 252860.0 331320.0 285033.0 315470.0 368480.0 357850.0 True False 223522.5527499208 332633.3387098868 280517.56546290853 219052.8364954801 272758.64342340454 329252.10898308584 313846.9172940066 314375.7082012512 301573.32062488893 354679.727403087 0.6302095538037096 0.9378414186381031 0.7909038599888892 0.6176074344574268 0.7690280056898187 0.9283082272387585 0.8848741358632132 0.886365032766502 0.8502694045497458 1.0 18.436157346263723 -6.221204397081237 7.000746752537527 0.9012729429700181 0.7540742313876972 0.4366765646790196 0.09101904565951828 0.2594769431709629 37.184200136205604 0.030731101333453158 0.03044086004737839 6.008908666407454e-07 6.221204397081237 -0.1471987115823209 LQKEFER ddPTM_KYSE-520_SHP099_60min_R1 2 LQKEFER 7 1 Q7L775 Q7L775 EPM2AIP1 EPM2A-interacting protein 1 0 ; 56.721000000000004 0.059641999999999994 1616580000.0 1834650.0 1888120.0 3245500.0 1890150.0 2978200.0 1447230.0 3032900.0 1646940.0 5566100.0 1883080.0 False True 1732878.3072158992 1797411.8810741005 3454710.1229836033 2069789.287705679 3212567.3963599717 1438197.3007472884 3339495.1302515576 1641227.1495386858 4555436.549962526 1866397.3762140723 0.9284616069976415 0.9630381525289611 1.851004596883528 1.1089756737143408 1.7212665626848247 0.77057400480525 1.7892733738329707 0.8793556883732139 2.4407645488674468 1.0 20.831824753616186 -4.635430306878215 11.275266389714618 1.4267710681414667 0.9373856059181179 0.13989424904701087 0.4939423328627567 0.6474081844696298 60.70018901313096 0.11432204652238283 0.30275279927097987 2.315099670306879e-05 4.635430306878215 -0.4893854622233488 LQLEETMPS(ph)PYGR ddPTM_KYSE-520_SHP099_60min_R1 2 LQLEETMPSPYGR 13 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 LQLEETMPS(1)PYGR;LQLEETMPS(1)PYGR 213.55 1.0665999999999998e-09 0.0 697290.0 576750.0 507810.0 481690.0 497980.0 564900.0 557530.0 569040.0 691900.0 612310.0 True False 658609.933686846 549042.0642805999 540544.245124728 527469.6727746209 537168.1928813842 561374.2495609849 613890.573368444 567066.1330549337 566268.4013796153 606885.4097699709 1.0852294734461987 0.9046881922712634 0.8906858468217445 0.8691421218620973 0.885122931337216 0.9250086433512444 1.011542811024454 0.934387487202683 0.9330730188327467 1.0 19.21106461140689 -6.555916055121295 24.784604996630517 0.9648535351710036 0.9189626515759985 0.09707739609274924 0.06134211403725578 416.7169656449348 312617.5821628727 0.023996568029067356 0.018587768984712434 2.7802506110959075e-07 6.555916055121295 -0.04589088359500504 LQLELS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 4 LQLELSK 7 0 P02545-3;P02545;P02545-2;P02545-6;Q3BDU5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 LQLELS(1)K;LQLELS(1)K;LQLELS(1)K;LQLELS(1)K 104.79 0.004113800000000001 403077000.0 996810.0 978483.0 912432.0 950198.0 976777.0 871203.0 848697.0 1012620.0 975845.0 1088236.0 True False 941514.9622085294 931475.207947073 971248.826662819 1040504.532232554 1053643.7927991096 865765.4989206555 934491.5752445223 1009107.4575672856 798656.147050572 1078595.0756747967 0.8729086414746456 0.8636004641170073 0.9004758584264636 0.9646850386198803 0.976866867429302 0.802678890758898 0.8663970347350978 0.9355758062736956 0.7404596637444429 1.0 20.040721921676933 -6.26145800493928 24.99999987667923 0.8648316921001347 0.9146873291881327 0.09094761523644068 0.07316582915826855 4.216879311985981 5656724.973734105 0.024575170066062944 0.023084150753962047 5.476990593673056e-07 6.26145800493928 0.049855637087998006 LQLERPVS(ph)PETQADLQR ddPTM_KYSE-520_SHP099_60min_R1 7 LQLERPVSPETQADLQR 17 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 LQLERPVS(0.99)PET(0.01)QADLQR;LQLERPVS(0.772)PET(0.228)QADLQR;LQLERPVS(0.992)PET(0.008)QADLQR;LQLERPVS(0.99)PET(0.01)QADLQR;LQLERPVS(0.994)PET(0.006)QADLQR;LQLERPVS(0.998)PET(0.002)QADLQR;LQLERPVS(0.818)PET(0.182)QADLQR 202.95 4.824e-13 6348200000.0 3554540.0 3325100.0 3107900.0 2513420.0 2970500.0 3561380.0 2928980.0 3806850.0 4624080.0 3682850.0 True False 3357362.580400182 3165357.2049231483 3308240.2068158216 2752294.681112723 3204261.4501669835 3539152.1063931626 3225069.8824900966 3793644.9258754733 3784463.6355708167 3650222.8142139423 0.9197692171904234 0.8671682157585748 0.9063118541513568 0.7540073089224325 0.8778262624652972 0.9695715265960557 0.8835268548351889 1.039291330683444 1.0367760622267062 1.0 21.799553099933362 -6.9900250900717635 1.2349156388930485 1.032455902139372 0.8663236828760356 0.581005079385789 0.05418439334468901 0.34285117264968556 0.9907939120753783 0.04156983250164429 0.019471034897669232 1.0232338762798337e-07 6.9900250900717635 -0.16613221926333643 LQLERPVSPET(ph)QADLQR ddPTM_KYSE-520_SHP099_60min_R1 1 LQLERPVSPETQADLQR 17 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 LQLERPVS(0.484)PET(0.516)QADLQR 111.01 0.00052016 745540000.0 374310.0 383800.0 289800.0 227510.0 291520.0 355400.0 254990.0 351030.0 445750.0 336350.0 True False 353546.27813151386 365361.67190445494 308480.9716963943 249132.48199662415 314460.96547809406 353181.81677106384 280766.87766258244 349812.35886101815 364813.036443075 333370.2006763402 1.0605215385605566 1.0959637998933636 0.9253405705445457 0.7473147914576201 0.9432785679107396 1.0594282753963309 0.8422074831312567 1.0493210195491984 1.0943180755296775 1.0 18.346765624778342 -7.474582252969863 24.870128829278112 1.0553794038282864 0.9530363829477208 0.1525062478100062 0.10166136420109997 677.8138456620488 349039.0476441689 0.059811208825709644 0.028731059531485477 3.3528779678477594e-08 7.474582252969863 -0.10234302088056568 LQLLEDDKENR ddPTM_KYSE-520_SHP099_60min_R1 3 LQLLEDDKENR 11 1 P09874 P09874 PARP1 Poly [ADP-ribose] polymerase 1 0 ;; 103.88 0.0047888 0.0 442225.0 491271.0 294097.0 277773.0 429461.0 374953.0 313013.0 370567.0 343185.0 361095.0 False True 417693.8976963185 467669.6037471955 313054.96319183777 304172.4624045026 463257.1374011655 372612.7792452466 344655.40875249123 369281.5895679878 280871.25498982996 357895.9792276591 1.1670818392475477 1.306719356714843 0.8747093607126059 0.8498906946675063 1.2943904494285634 1.0411203278934467 0.9630044168036168 1.0318126243410135 0.7847846058398062 1.0 18.449180810365178 -1.000000000916866 0.44412991870309787 0.9737393972735714 6.695629455977146 0.19455681379107792 0.15215922509092872 145.6529044179937 1.7814325815675 0.09985931025529474 752.728066034339 0.09999999978888383 1.000000000916866 5.721890058703575 LQLLSPQVDINS(ph)PINAK ddPTM_KYSE-520_SHP099_60min_R1 2 LQLLSPQVDINSPINAK 17 0 O94915;F2Z2S2;A0A669KB90;A0A6E1XQM6 O94915 FRYL Protein furry homolog-like 1 LQLLSPQVDINS(1)PINAK;LQLLSPQVDINS(1)PINAK 215.75 4.9595e-18 598900000.0 1013860.0 1052200.0 644740.0 551670.0 663000.0 907200.0 618600.0 812250.0 886840.0 909890.0 True False 957619.164720197 1001650.7326156006 686300.9720204737 604100.550934367 715174.3280460213 901537.8282912464 681134.1249542072 809432.4943305757 725812.2114171095 901829.0824837091 1.0618632547121207 1.1106879918498245 0.761010024350009 0.6698614656234261 0.7930264635914981 0.9996770405854949 0.7552807268959542 0.897545344292218 0.8048223610378198 1.0 19.782494509671164 -4.755801652750812 24.99899354340971 0.8271093273123684 1.086275732088666 0.4966475848568417 0.10086511410906868 106.20660230689228 470931.055832991 0.02615292764656384 0.06524557999507809 1.754681702039609e-05 4.755801652750812 0.2591664047762976 LQLQGLDLS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 6 LQLQGLDLSSR 11 0 P49454 P49454 CENPF Centromere protein F 1 LQLQGLDLS(0.95)S(0.05)R;LQLQGLDLS(0.933)S(0.067)R;LQLQGLDLS(0.691)S(0.309)R;LQLQGLDLS(0.911)S(0.089)R;LQLQGLDLS(0.935)S(0.065)R;LQLQGLDLS(0.951)S(0.049)R 194.98 2.1609e-05 1805699000.0 1624330.0 1378150.0 1520350.0 1307820.0 1295660.0 1294010.0 1291130.0 1317070.0 1672620.0 1402420.0 True False 1534225.176878422 1311941.6053546774 1618354.1936460105 1432114.8195895788 1397621.070703029 1285933.6036013635 1421650.0206144946 1312501.3915764482 1368914.371318936 1389995.6498662492 1.103762574383633 0.9438458354030946 1.1642872362958365 1.0303016557838742 1.0054859314397953 0.9251349842174693 1.0227729998660724 0.9442485605640148 0.9848335650911271 1.0 20.40664893721813 -5.773713519277441 3.090570597791439 0.9747399691667127 1.0621174525280452 0.3300215578413256 0.05774255695449438 0.29244036251611377 5.765999212962058 0.017680559384116182 0.021854370935155968 1.683784396864161e-06 5.773713519277441 0.08737748336133255 LQLQGLDLSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 LQLQGLDLSSR 11 0 P49454 P49454 CENPF Centromere protein F 1 LQLQGLDLS(0.257)S(0.743)R;LQLQGLDLS(0.262)S(0.738)R 194.98 5.9552e-07 1487630000.0 1039830.0 941670.0 1049290.0 839090.0 799360.0 887700.0 862810.0 873860.0 1048980.0 861570.0 True False 982148.5570502845 896430.7597245137 1116928.9123233592 918836.8613183933 862265.0842637537 882159.5350244036 950031.255014129 870828.7836204564 858511.6746338898 853937.1600913163 1.15014148926984 1.049761975024782 1.3079755332393774 1.0760005586595351 1.0097523852592933 1.033049709337007 1.1125306397399743 1.0197808741890724 1.0053569685878108 1.0 19.703770382502405 -5.509266479742479 24.850390464918643 1.0360238924223306 1.1631145937419474 0.47164628470899606 0.06561718244874373 547.0382937554507 998667.1767048622 0.018557218548654175 0.026224340928784864 3.0955193296015103e-06 5.509266479742479 0.12709070131961675 LQLS(ph)DEESVFEEALMSPDTR ddPTM_KYSE-520_SHP099_60min_R1 9 LQLSDEESVFEEALMSPDTR 20 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 LQLS(0.828)DEES(0.172)VFEEALMSPDTR;LQLS(0.813)DEES(0.187)VFEEALMSPDTR;LQLS(0.977)DEES(0.023)VFEEALMSPDTR;LQLS(0.957)DEES(0.043)VFEEALMSPDTR;LQLS(0.824)DEES(0.176)VFEEALMSPDTR;LQLS(0.846)DEES(0.154)VFEEALMSPDTR;LQLS(0.936)DEES(0.064)VFEEALMSPDTR;LQLS(0.973)DEES(0.027)VFEEALMSPDTR;LQLS(0.915)DEES(0.085)VFEEALMSPDTR 174.2 2.4782e-09 624639600.0 436547.0 444784.0 398931.0 363463.0 396335.0 372576.0 284057.6 349564.0 473576.0 341766.0 True False 412330.8676751308 423415.9090056045 424646.73057216854 398006.41424086393 427524.3096623229 370250.61498394975 312772.91434301995 348351.4440728512 387586.5362794518 338738.21912992443 1.2172552265706387 1.249979733887665 1.253613281852006 1.1749675465118004 1.262108275707573 1.093028758121736 0.9233469879672911 1.02837951078452 1.1442066893868608 1.0 18.369811246738347 -6.418372186741224 4.2740639042333735 1.0240613032297934 1.229867022596873 0.7584409562445293 0.05561504289592897 0.11535416508000404 3.5742296417635053 0.020767042147796923 0.017938721343961753 3.8161708800866914e-07 6.418372186741224 0.2058057193670797 LQLS(ph)PWESSVVNR ddPTM_KYSE-520_SHP099_60min_R1 7 LQLSPWESSVVNR 13 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 LQLS(0.996)PWES(0.003)SVVNR;LQLS(1)PWESSVVNR;LQLS(0.999)PWES(0.001)SVVNR;LQLS(1)PWESSVVNR;LQLS(0.963)PWES(0.03)S(0.007)VVNR;LQLS(0.999)PWESSVVNR;LQLS(1)PWESSVVNR 196.8 1.5276e-08 3653905000.0 2146534.0 2026688.0 2000989.0 1797904.0 1817903.0 1827541.0 1806596.0 1915778.0 2187995.0 1870722.0 True False 2027461.4800105598 1929322.8663592942 2129975.952635597 1968776.2556004503 1960961.623646829 1816134.6387270864 1989224.3543578607 1909132.6132639446 1790710.2628654286 1854148.858479692 1.0934728734094066 1.0405436745468437 1.1487621087672915 1.0618221113135151 1.0576074378702895 0.9794977519853636 1.0728504053277168 1.0296544446972486 0.9657855973515095 1.0 20.82232564326034 -5.895587096158762 2.4543034690604437 1.015442294513232 1.0890886309089578 0.4759329609719535 0.03774112191122832 0.2751804654935621 3.372592294166308 0.012795099111786773 0.014911288635148044 1.2717826731782746e-06 5.895587096158762 0.07364633639572582 LQLS(ph)VTEVGTEK ddPTM_KYSE-520_SHP099_60min_R1 2 LQLSVTEVGTEK 12 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6;H0Y7R8 A8MQ02 MLLT4 Afadin 1 LQLS(0.998)VT(0.002)EVGTEK;LQLS(0.999)VT(0.001)EVGTEK 139.6 3.6896999999999996e-05 348438000.0 403560.0 444880.0 339710.0 319320.0 355260.0 423480.0 320290.0 401630.0 509220.0 442400.0 True False 381173.72232308483 423507.2970215059 361608.2501552181 349668.07679294096 383216.9408471038 420836.90423806955 352668.038929168 400236.8392711469 416758.48439157 438480.6801819922 0.8693056263388343 0.9658516695552662 0.8246845676419129 0.7974537821091926 0.8739653949817102 0.9597615659221301 0.8042955023304391 0.9127810126207337 0.9504603126837735 1.0 18.742153752181697 -7.8196278424231505 2.2155411452248948 0.996198529216527 0.8728597398555472 0.37591597058191695 0.0543965205674866 0.31827648526554697 3.0864036212979906 0.05284372877173277 0.014971146517226587 1.5148588120127384e-08 7.8196278424231505 -0.12333878936097975 LQLSDEES(ph)VFEEALMSPDTR ddPTM_KYSE-520_SHP099_60min_R1 1 LQLSDEESVFEEALMSPDTR 20 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 LQLS(0.477)DEES(0.523)VFEEALMSPDTR 67.274 0.011377 38707000.0 37959.0 38165.0 31047.0 34942.0 32757.0 36163.0 24989.0 30019.0 40597.0 29062.0 True False 35853.33860060951 36331.49611316709 33048.3392969564 38262.877174304645 35334.789538165234 35937.293303016246 27515.131989137873 29914.871095487266 33225.60816708807 28804.533289893865 1.2447116653401475 1.2613117437981223 1.1473311844476746 1.3283630319304378 1.2267093232356772 1.2476263003929637 0.9552361675928149 1.0385473284506563 1.1534853848420223 1.0 14.814008262056388 -6.747001918933654 24.9915351837174 1.0400295053504227 1.2423580006783457 0.7241286880759381 0.06223432166468043 123.41242478120813 213629.48891003287 0.02362127707764581 0.01821231584166437 1.790597942246437e-07 6.747001918933654 0.20232849532792296 LQMEAPHIIVGTPGR ddPTM_KYSE-520_SHP099_60min_R1 1 LQMEAPHIIVGTPGR 15 0 P60842;P60842-2;J3KT12;J3QS69;J3KSZ0;J3QL43;J3KTB5;J3QR64;J3QLN6;J3KS25;J3QKZ9 P60842 EIF4A1 Eukaryotic initiation factor 4A-I 0 119.47 0.00022296 562000000.0 461990.0 428300.0 344900.0 351260.0 428930.0 451430.0 314320.0 370960.0 378990.0 392790.0 False True 436362.4937457674 407723.8251085935 367132.8058595118 384643.6447898298 462684.3507221418 448612.45792054414 346094.53306758264 369673.226342715 310174.9695604284 389310.1861859961 1.120860715258274 1.0472981174805431 0.9430341637249406 0.9880133077382752 1.188472244343205 1.1523265350838159 0.888994291308456 0.9495596042948143 0.7967296530284974 1.0 18.570560567305332 -6.777169266027803 24.999111572624713 0.9046174623400299 1.0675833228417853 0.48066181260935803 0.08360078176338427 236.63670139038956 376077.3396706239 0.037333909534651225 0.025265154123577816 1.6704394345990461e-07 6.777169266027803 0.16296586050175532 LQMYFQS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 LQMYFQSPK 9 0 H7C4Y3;A0A3B3ITD5;Q460N5-4;Q460N5-1;Q460N5 H7C4Y3 PARP14 Poly [ADP-ribose] polymerase 14 1 LQMYFQS(1)PK;LQMYFQS(1)PK 157.68 0.00016741 2099300000.0 3056700.0 2623400.0 2313100.0 2543200.0 2688500.0 2838300.0 2398400.0 2639100.0 3049200.0 2458400.0 True False 2887138.7576196175 2497367.9261963195 2462206.1270908574 2784904.96335904 2900069.6545274965 2820585.116886071 2640853.6781283086 2629945.57807057 2495542.1440767744 2436620.4886062583 1.1848947224731967 1.0249310214184437 1.0105004610296264 1.1429375138152926 1.1902016206825587 1.1575808091884836 1.0838182189130616 1.0793414856225283 1.0241817122305408 1.0 21.21645013353995 -7.685087376164691 1.698802787644997 1.0005013176955488 1.1124309526910425 0.33523160844152144 0.057394294923876585 0.48090057870535086 2.603995103955672 0.058752017671492816 0.01790779039999289 2.064964661597713e-08 7.685087376164691 0.11192963499549369 LQNAT(ph)PTNFK ddPTM_KYSE-520_SHP099_60min_R1 4 LQNATPTNFK 10 0 Q9NXF1-2;Q9NXF1 Q9NXF1-2 TEX10 Testis-expressed sequence 10 protein 1 LQNAT(0.5)PT(0.5)NFK;LQNAT(0.977)PT(0.023)NFK;LQNAT(0.953)PT(0.047)NFK;LQNAT(1)PTNFK 199.4 7.3088e-06 3453060000.0 5668440.0 5852150.0 4402760.0 3610240.0 3662440.0 5434120.0 4124570.0 5152440.0 5780290.0 5761120.0 True False 5354000.333445005 5571003.9297437705 4686568.954265071 3953356.1241417686 3950653.191566925 5400203.641395538 4541521.787524047 5134567.388228534 4730735.045253039 5710080.958883533 0.9376400040555378 0.9756435976755475 0.8207535038489918 0.6923467727705827 0.6918734112553421 0.9457315369573002 0.7953515580998051 0.8992109613157697 0.8284882612554094 1.0 22.445079769930118 -8.985962749408245 12.87506988733783 0.9999981248116632 0.840647945989077 0.1994692425657676 0.09424753728379055 0.0 0.0 0.09880779857088838 0.023964411184854505 1.032849992250602e-09 8.985962749408245 -0.15935017882258617 LQPERGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 LQPERGSPK 9 1 S4R3H4;Q9UKV3;E7EQT4;A0A087WYN3;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK;LQPERGS(1)PK 124.39 0.0010694 65479200000.0 42358500.0 39161300.0 37815060.0 32501030.0 34140840.0 33979110.0 31518500.0 31495960.0 43743000.0 31109500.0 True False 40008789.56542372 37279932.365690276 40252679.27383525 35589918.11940902 36827529.87319273 33767033.770579144 34704697.570916854 31386707.865972295 35800373.871294245 30833894.032824755 1.297558768374558 1.2090569010194845 1.3054685610252006 1.15424662488368 1.1943846545618708 1.0951271264872307 1.1255372913317847 1.0179287712592848 1.161072092716617 1.0 24.878013764071355 -5.434084880612379 0.29217303334960215 1.008845531107074 1.3927178898067463 0.7218971512057992 0.05132709479213702 2.060221539234277 0.24839363058627553 0.06381255269581193 0.2722556007084987 3.680570317674111e-06 5.434084880612379 0.3838723586996722 LQPQEIS(ph)PPPTANLDR ddPTM_KYSE-520_SHP099_60min_R1 7 LQPQEISPPPTANLDR 16 0 E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397-7;Q05397;B4DWJ1;Q05397-6;Q05397-2;Q05397-5 E9PEI4 PTK2 Focal adhesion kinase 1 1 LQPQEIS(0.999)PPPT(0.001)ANLDR;LQPQEIS(0.996)PPPT(0.004)ANLDR;LQPQEIS(0.998)PPPT(0.002)ANLDR;LQPQEIS(1)PPPTANLDR;LQPQEIS(0.997)PPPT(0.003)ANLDR;LQPQEIS(1)PPPTANLDR;LQPQEIS(0.999)PPPT(0.001)ANLDR 172.12 3.2429e-08 12286730000.0 2791110.0 3331350.0 2472390.0 2193980.0 2214270.0 3078640.0 2297260.0 2966770.0 3513260.0 3129230.0 True False 2636281.5643601585 3171306.9455417036 2631764.215363869 2402495.1995558576 2388520.4515270963 3059425.0657964754 2529489.4598970274 2956478.967319324 2875340.546077389 3101507.4567041034 0.8500000729199184 1.022505020481806 0.8485435718283202 0.7746217712173199 0.770115979042436 0.9864316331670704 0.8155677505883072 0.9532393549235901 0.9270783921096689 1.0 21.56453816279328 -7.2949378163124825 20.139099524932917 0.9551197353105451 0.8694452537500809 0.22506276373530387 0.07905237300795993 113.16937230080073 68032.84396123221 0.04507660352033298 0.021662915867215728 5.070633060401283e-08 7.2949378163124825 -0.0856744815604642 LQPS(ph)SSPENSLDPFPPR ddPTM_KYSE-520_SHP099_60min_R1 1 LQPSSSPENSLDPFPPR 17 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 LQPS(0.565)S(0.331)S(0.104)PENSLDPFPPR 85.57600000000001 0.0062943999999999995 279560000.0 458560.0 522610.0 352680.0 387110.0 345350.0 415010.0 375930.0 485380.0 566100.0 454820.0 True False 433122.7626833026 497503.031146397 375414.3171079519 423900.818011135 372527.080227291 412419.76864985726 413932.6731232382 483696.33006854384 463310.51021968544 450790.6486446058 0.9608068933674082 1.103623228747627 0.8327908270429117 0.9403496263413613 0.8263859983506086 0.9148809317360099 0.9182370449959673 1.0729954836527236 1.0277731173277953 1.0 18.782098062498 -7.252824812918448 24.332036105181743 1.03778822565146 0.9272790052143931 0.29935697555838303 0.07382610406923804 541.8470986507467 1530464.9941981533 0.037044888939929355 0.020939109441610478 5.586955176528075e-08 7.252824812918448 -0.11050922043706679 LQPSS(ph)SPENSLDPFPPR ddPTM_KYSE-520_SHP099_60min_R1 1 LQPSSSPENSLDPFPPR 17 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 LQPS(0.066)S(0.472)S(0.461)PENSLDPFPPR 151.9 4.3708e-06 2565600000.0 472630.0 589250.0 422770.0 297010.0 321770.0 515160.0 330320.0 445240.0 555310.0 524360.0 True False 446412.27173545357 560941.5455177181 450022.4306559166 325237.74110068736 347091.4683791383 511944.6953511002 363711.9692125346 443695.56635979743 454479.7022259195 519714.5783459065 0.8589566087529199 1.079326170343392 0.8659030348700265 0.6258006887854103 0.6678501678437132 0.9850497112866538 0.6998302229083495 0.8537293061355822 0.8744794184384633 1.0 18.987360002583205 -4.991669911778647 24.39743193016586 0.8007069880328839 0.9700097915957532 0.17778196227195664 0.12831828862524977 207.09763460198982 606538.408493613 0.03303587394647703 0.06857477486443309 1.019365869059334e-05 4.991669911778647 0.1693028035628693 LQPSSS(ph)PENSLDPFPPR ddPTM_KYSE-520_SHP099_60min_R1 7 LQPSSSPENSLDPFPPR 17 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 LQPS(0.184)S(0.184)S(0.63)PENS(0.002)LDPFPPR;LQPS(0.01)S(0.069)S(0.92)PENS(0.001)LDPFPPR;LQPSS(0.002)S(0.998)PENSLDPFPPR;LQPS(0.37)S(0.214)S(0.416)PENSLDPFPPR;LQPS(0.017)S(0.049)S(0.934)PENSLDPFPPR;LQPS(0.016)S(0.081)S(0.903)PENSLDPFPPR;LQPS(0.001)S(0.158)S(0.839)PENS(0.001)LDPFPPR 300.2 5.142299999999999e-38 10368270000.0 3558590.0 3815950.0 2968400.0 2327530.0 2473850.0 3568720.0 2607870.0 3232710.0 3792830.0 3456140.0 True False 3361187.9188267086 3632626.034142278 3159747.8136079255 2548737.751402589 2668527.9207189353 3546446.294730529 2871498.949958502 3221496.483530187 3104147.6814635717 3425521.288436233 0.9812193928478276 1.060459336920539 0.922413713870208 0.7440437635014961 0.7790136729633729 1.0353011983030176 0.8382662690353195 0.9404397790214335 0.9061825690421063 1.0 21.707892120321564 -4.9065759041300305 5.767446915738081 0.884533665390586 1.0185206851522017 0.25012529622667734 0.087155624536445 0.2645102462129894 13.184009599710174 0.023454199875179573 0.050134428733782 1.2400068830851226e-05 4.9065759041300305 0.13398701976161576 LQPST(ph)PEKK ddPTM_KYSE-520_SHP099_60min_R1 1 LQPSTPEKK 9 1 K7EQT1;Q9UM11-2;Q9UM11;Q9UM11-3 K7EQT1 FZR1 Fizzy-related protein homolog 1 LQPS(0.281)T(0.719)PEKK 58.098 0.03495 0.0 829260.0 799500.0 666600.0 572810.0 611990.0 773110.0 659770.0 758270.0 827520.0 745790.0 True False 783259.2947111737 761090.8199260343 709570.1025977109 627249.6901783943 660150.1312532205 768284.7337194072 726465.990334687 755639.7383515483 677263.2280815992 739182.8808158403 1.0596285642420262 1.02963804990453 0.9599384956190468 0.8485717221780018 0.893080925419443 1.0393703015300448 0.9827960159641176 1.0222635804518965 0.9162322960376192 1.0 19.495571819329196 -9.35212710904571 14.358633398373398 0.9999984698622837 0.9714770277944694 0.01556721662882632 0.06550348772680716 0.0 0.0 0.06866957182794545 0.016654817524268117 4.4450115210123683e-10 9.35212710904571 -0.028521442067814262 LQQELDDLLVDLDHQR ddPTM_KYSE-520_SHP099_60min_R1 13 LQQELDDLLVDLDHQR 16 0 P35579 P35579 MYH9 Myosin-9 0 ;;;;;;;;;;;; 211.17 1.5106e-17 1286968000.0 346473.9 329690.0 268980.0 243285.6 388676.0 307313.3 263195.9 273807.6 298280.0 326476.5 False True 327254.30208840367 313851.1975252209 286318.88118321635 266407.39027751744 419262.5899360716 305395.24370261945 289802.3101164489 272857.82534277457 244119.87102689903 323584.1722048731 1.0113421180601097 0.9699213511794085 0.8848358658344304 0.8233016728297979 1.2956832439586103 0.9437891897545051 0.8956010058890159 0.8432360071370184 0.7544246350601403 1.0 18.303781515950078 -6.7823013226630104 3.4759551181786787 0.8549690747297646 0.9906448831085591 0.16382626494662145 0.12883187450554656 0.4258556204489785 10.778594292325202 0.057965277532977845 0.03964454208072286 1.6508160298483029e-07 6.7823013226630104 0.13567580837879456 LQQELEFLEVQEEYIKDEQK ddPTM_KYSE-520_SHP099_60min_R1 4 LQQELEFLEVQEEYIKDEQK 20 1 P43686 P43686 PSMC4 26S protease regulatory subunit 6B 0 ;;; 280.69 1.1769e-36 606030000.0 593377.0 458030.0 361346.0 641936.0 440833.0 461364.0 427783.0 517686.0 441988.0 313569.0 False True 560461.1949422759 436025.5512829534 384638.941334042 702945.4044349041 475524.04910333693 458484.4561417133 471027.4803997503 515890.26809482067 361734.12081077206 310791.0226129907 1.803337787012543 1.4029541381763453 1.2376127794817602 2.2617944319139474 1.5300443529717984 1.4752178241410672 1.515576210791302 1.65992654407276 1.16391431698855 1.0 18.245585305663855 -7.870685231662999 3.95331812036117 1.0073846761809453 1.603097342659492 0.4005207383379704 0.26149439207469516 0.21713065445445992 5.796095666566542 0.251658297412913 0.066831868048334 1.3468361614889936e-08 7.870685231662999 0.5957126664785468 LQQGAGLES(ph)PQGQPEPGAAS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 1 LQQGAGLESPQGQPEPGAASPQR 23 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 LQQGAGLES(1)PQGQPEPGAAS(1)PQR 101.05 0.0020844 0.0 150650.0 142970.0 144680.0 129780.0 134470.0 131240.0 136260.0 136450.0 152950.0 134570.0 True False 142293.1441866706 136101.50659765492 154006.30429618494 142114.2521802201 145052.02397035994 130420.88247899369 150034.4905694478 135976.6867976695 125178.13555573359 133377.8144938758 1.066842673398312 1.0204208781956325 1.1546620769022746 1.0655014308001383 1.087527371180761 0.9778304058579556 1.1248834083747625 1.0194850418988761 0.9385229172538383 1.0 17.02515918907426 -7.521396362955394 7.298922469501766 0.9718292548223973 1.0694746618218842 0.41878569959398704 0.04836070600204965 0.11543560518531773 43.62805071552268 0.029574526160280747 0.012157352136768298 3.010257430273819e-08 7.521396362955394 0.09764540699948687 LQQQAALS(ph)PTTAPAVSSVSK ddPTM_KYSE-520_SHP099_60min_R1 3 LQQQAALSPTTAPAVSSVSK 20 0 A0A0U1RRM1;Q8WXI9;A0A0U1RR30 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LQQQAALS(0.658)PT(0.117)T(0.225)APAVSSVSK;LQQQAALS(0.875)PT(0.099)T(0.026)APAVSSVSK;LQQQAALS(0.998)PT(0.002)TAPAVSSVSK 331.8 8.920899999999998e-65 1687860000.0 1907760.0 2821990.0 1811000.0 1708958.0 1582680.0 2686530.0 1818100.0 2608000.0 2833440.0 2642590.0 True False 1801932.7497747259 2686417.364506651 1927739.9577024514 1871376.8545030411 1707227.911782624 2669762.369752295 2001891.2909460766 2598953.456711775 2318958.721209797 2619178.70850391 0.6879762514578474 1.0256716564564425 0.7360093266807242 0.7144899461907975 0.6518180322097237 1.019312794917029 0.7643202368919563 0.9922780176371824 0.8853762874906691 1.0 21.320683068522598 -6.267071913332233 24.963838788013064 0.9212787618762712 0.7735592542533171 0.33855756366002465 0.11720870455733469 642.2897552839042 2846670.4185878304 0.04100855338863017 0.03715003429251613 5.406647887068076e-07 6.267071913332233 -0.14771950762295416 LQQQHSEQPPLQPS(ph)PVMTR ddPTM_KYSE-520_SHP099_60min_R1 15 LQQQHSEQPPLQPSPVMTR 19 0 H0YDU3;A0A0A0MSK5;J3KN66;Q5JTV8-2;Q5JTV8;Q5JTV8-3 H0YDU3 TOR1AIP1 Torsin-1A-interacting protein 1 1 LQQQHSEQPPLQPS(0.986)PVMT(0.014)R;LQQQHSEQPPLQPS(0.972)PVMT(0.028)R;LQQQHSEQPPLQPS(0.987)PVMT(0.013)R;LQQQHSEQPPLQPS(0.998)PVMT(0.002)R;LQQQHSEQPPLQPS(0.998)PVMT(0.002)R;LQQQHSEQPPLQPS(1)PVMTR;LQQQHSEQPPLQPS(0.998)PVMT(0.002)R;LQQQHSEQPPLQPS(0.996)PVMT(0.004)R;LQQQHSEQPPLQPS(0.998)PVMT(0.002)R;LQQQHSEQPPLQPS(1)PVMTR;LQQQHSEQPPLQPS(1)PVMTR;LQQQHSEQPPLQPS(0.978)PVMT(0.022)R;LQQQHSEQPPLQPS(1)PVMTR;LQQQHSEQPPLQPS(0.988)PVMT(0.012)R;LQQQHSEQPPLQPS(0.987)PVMT(0.013)R 268.84 2.7478000000000003e-35 37514340000.0 11185166.0 13547159.0 10446146.0 10669937.0 11312117.0 12688979.0 11423922.0 12533473.0 15337396.0 10815935.0 True False 10564702.54490437 12896333.146939773 11119521.28558455 11684004.60444645 12202316.250758654 12609782.375323234 12578763.522494538 12489997.30749758 12552511.510689562 10720114.230570095 0.9855027957423678 1.2030033327596312 1.0372577237913645 1.0899141887059067 1.138263640508776 1.1762731351653375 1.1733796162940326 1.1650992740245607 1.170930760690413 1.0 23.35381694304817 -5.791353820587853 4.252300908882719 1.1502659487851923 1.0841990282787894 0.12504615449243728 0.07107944082334343 0.37966926890829084 15.275610974155013 0.020913778189815616 0.025029607697140327 1.6167623214280514e-06 5.791353820587853 -0.06606692050640284 LQQTVPADAS(ph)PDSK ddPTM_KYSE-520_SHP099_60min_R1 7 LQQTVPADASPDSK 14 0 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 LQQTVPADAS(1)PDSK;LQQTVPADAS(1)PDSK;LQQTVPADAS(1)PDSK;LQQTVPADAS(1)PDSK;LQQTVPADAS(1)PDSK;LQQTVPADAS(1)PDSK;LQQTVPADAS(1)PDSK 283.85 1.2375e-32 4849780000.0 8911480.0 8497010.0 6818910.0 5989890.0 6487530.0 8719630.0 6935880.0 8522800.0 9222250.0 8048350.0 True False 8417142.43980504 8088800.885327966 7258467.849241755 6559167.344673903 6998061.702003637 8665207.55478748 7637026.438065622 8493236.396036478 7547721.874003689 7977047.880521557 1.0551701037620835 1.014009318544933 0.909919052506324 0.8222549799017942 0.877274626756545 1.0862674619198762 0.9573750280117782 1.06470921614691 0.9461798383376635 1.0 22.927423506734918 -6.25265386032377 24.96315372507542 1.0116049309962813 0.9323370913008315 0.2092829645238803 0.07291185155720824 1099.055923364222 3122857.1497063595 0.026241690783271338 0.02585120976761038 5.589154818772038e-07 6.25265386032377 -0.07926783969544982 LQQWYR ddPTM_KYSE-520_SHP099_60min_R1 1 LQQWYR 6 0 P06744-2;P06744;A0A2U3TZU2;A0A0J9YXP8;A0A2R8Y6C7;K7ERC6;A0A0J9YYH3;A0A0J9YX90;K7EP41;K7EPY4;K7ERK8;A0A2R8YF08;K7ELR7;A0A0J9YYI8;K7EIL4;A0A0J9YXM3;A0A0J9YXH9;K7ENA0 P06744-2 GPI Glucose-6-phosphate isomerase 0 115.83 0.064394 1679300000.0 2466200.0 2070800.0 1439100.0 1396600.0 2198900.0 2277600.0 1675900.0 1713000.0 1746000.0 1733500.0 False True 2329394.969752183 1971315.6596658328 1531866.688641413 1529332.4440968982 2371940.9199704337 2263384.653567179 1845316.3272078189 1707058.0028172042 1428970.4130782026 1718142.5386425941 1.3557635163334611 1.147352804164465 0.8915830055937345 0.8901080147314996 1.3805262756862817 1.317343935477757 1.0740181828369708 0.9935485353653212 0.8316949152583989 1.0 20.712418298037186 -7.273259505493681 2.9184246831398415 0.9203507121499819 1.1495058637793094 0.2607711488875817 0.1662040191133864 0.43083257633231437 7.3350354891000995 0.11347242436767312 0.05117593798307989 5.3301630522447524e-08 7.273259505493681 0.22915515162932754 LQRPPS(ph)VDSIIR ddPTM_KYSE-520_SHP099_60min_R1 3 LQRPPSVDSIIR 12 1 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 LQRPPS(0.919)VDS(0.081)IIR;LQRPPS(1)VDSIIR;LQRPPS(0.992)VDS(0.008)IIR 197.47 3.2332e-08 2726060000.0 625550.0 604570.0 596150.0 444455.0 479658.0 541590.0 460626.0 530038.0 673680.0 584260.0 True False 590849.4944969909 575525.549721929 634578.7828737252 486695.8695697312 517404.3557193045 538209.7359173896 507190.5713565413 528199.4218897987 551356.6940907922 579083.9109474021 1.0203175797620416 0.9938551889316843 1.095832177128754 0.840458283106984 0.8934877069418358 0.9294157992351387 0.8758498755849723 0.9121293337707232 0.9521188271122104 1.0 19.143412888517382 -5.259938946351919 24.9999999107909 0.9092192581769478 1.032387002080221 0.5816726870371642 0.04716208784767383 90.86335050247602 1513935.9957824093 0.012602350844705706 0.020401653274068808 5.496181344146456e-06 5.259938946351919 0.12316774390327323 LQS(ph)AS(ph)PSTR ddPTM_KYSE-520_SHP099_60min_R1 1 LQSASPSTR 9 0 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 2 LQS(0.997)AS(0.758)PS(0.24)T(0.005)R 59.225 0.041993 743600000.0 1295100.0 1608500.0 1294800.0 1719400.0 1645400.0 1471600.0 1498300.0 1762100.0 2334200.0 1569800.0 True False 1223258.221282157 1531225.245592276 1378264.8797532506 1882811.25904354 1774883.6189546376 1462415.198537696 1649762.7859988525 1755987.6863772317 1910368.1203935486 1555892.793285918 0.7862098382104695 0.9841457279061329 0.885835377412134 1.2101163185332309 1.1407493026600046 0.9399202855417789 1.0603319156165565 1.1286045503615514 1.2278276039565732 1.0 20.569311226098677 -5.24200194895393 24.197827384802345 1.099677331041156 0.8952718040461061 0.5252182305839976 0.09382486044269812 470.74338468017584 586030.9805376532 0.026190536530003052 0.0452613493349682 5.7279346049364665e-06 5.24200194895393 -0.20440552699505 LQS(ph)EPESIRK ddPTM_KYSE-520_SHP099_60min_R1 2 LQSEPESIRK 10 1 F8WF69;P09496-2;P09496-4;P09496-3;P09496 F8WF69 CLTA Clathrin light chain A 1 LQS(0.972)EPES(0.028)IRK;LQS(0.996)EPES(0.004)IRK 77.527 0.009193799999999999 652970000.0 452910.0 417490.0 454750.0 370160.0 407420.0 428180.0 368250.0 380790.0 539420.0 442270.0 True False 427786.17944629834 397433.1537347345 484063.9126257263 405339.8951073383 439481.63609730056 425507.56979469396 405476.30377366155 379469.12836705387 441474.9256716176 438351.8318808536 0.9758968671598318 0.906653342885445 1.1042817148698434 0.9246907749150501 1.0025773913424731 0.9706987375162817 0.9250019602607071 0.8656725049804186 1.0071246281265978 1.0 18.7417297514658 -6.618881663140327 5.4148625997742945 0.9385769490586651 0.9825108264073507 0.04941728160590697 0.06193288823676592 0.5136654580635862 23.527757963133173 0.023330022880498093 0.01790510839026505 2.405018031704309e-07 6.618881663140327 0.04393387734868559 LQS(ph)LTENLTK ddPTM_KYSE-520_SHP099_60min_R1 1 LQSLTENLTK 10 0 P15924 P15924 DSP Desmoplakin 1 LQS(0.99)LT(0.01)ENLTK 128.46 0.00025713 0.0 123130.0 110070.0 96551.0 83372.0 98233.0 112020.0 77526.0 116550.0 133330.0 109320.0 True False 116299.7334464304 104782.07198156166 102774.83194706212 91295.64981329408 105963.37823068623 111320.84162829093 85363.08466084686 116145.71525297445 109120.63297578286 108351.50984967314 1.073355909924879 0.9670568700605675 0.9485316087394804 0.8425877031151447 0.9779594061744021 1.0274046183826828 0.787834749873625 1.07193444202222 1.0070984070935127 1.0 16.725359731582834 LQS(ph)PLEPHSK ddPTM_KYSE-520_SHP099_60min_R1 1 LQSPLEPHSK 10 0 O15211-2;O15211 O15211-2 RGL2 Ral guanine nucleotide dissociation stimulator-like 2 1 LQS(1)PLEPHSK 112.42 0.00042752 299490000.0 208170.0 197100.0 182340.0 153430.0 190470.0 195570.0 178410.0 198370.0 255800.0 192360.0 True False 196622.3951233932 187631.02014686828 194093.92815431507 168011.94106958827 205458.9053739453 194349.3750869918 196445.4239138057 197681.9007699062 209353.16819324414 190655.84005381545 1.0312948980104337 0.9841346590479821 1.0180329545611042 0.881231548019533 1.0776428632658275 1.0193727872806506 1.0303666746235314 1.0368520613588734 1.0980684784381696 1.0 17.54061119793533 LQSAS(ph)PSTR ddPTM_KYSE-520_SHP099_60min_R1 1 LQSASPSTR 9 0 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 1 LQS(0.213)AS(0.698)PS(0.085)T(0.005)R 92.943 0.0036753999999999997 736830000.0 503900.0 482880.0 422540.0 465610.0 494260.0 479000.0 474650.0 516080.0 735150.0 482630.0 True False 475947.6625002536 459681.71998234326 449777.60448790423 509861.4344092486 533155.4500452894 476010.3833239722 522632.2541375923 514289.83893397806 601665.29162339 478354.27368045825 0.9949689773613013 0.9609650112364454 0.9402604497025079 1.065865745248546 1.1145619039696055 0.9951000952945351 1.0925631543258916 1.0751233285260138 1.257781783769123 1.0 18.867719962034357 -5.356526974356961 4.811023085340271 1.0883487757654846 0.9652990488732541 0.39179197573745794 0.06911824283022258 0.2285351109620311 8.695528404747876 0.019607831250007684 0.02969334679733815 4.400206169757047e-06 5.356526974356961 -0.12304972689223048 LQSFDS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 3 LQSFDSPER 9 0 E9PGM9;P78332-2;P78332 E9PGM9 RBM6 RNA-binding protein 6 1 LQS(0.005)FDS(0.995)PER;LQS(0.003)FDS(0.997)PER;LQSFDS(1)PER 163.09 0.00012713 1848010000.0 2639860.0 2408210.0 2461450.0 2265950.0 2501520.0 2394880.0 2279880.0 2372680.0 2861260.0 2477910.0 True False 2493421.7033695565 2292515.9768030928 2620119.005459248 2481305.2067172914 2698375.3922981666 2379932.665584372 2510352.5198845747 2364449.7268676725 2341727.310494926 2455957.645184808 1.0152543584203095 0.9334509417529404 1.0668420974589272 1.0103208463640163 1.0987059966561912 0.9690446699072796 1.0221481322393382 0.9627404330459252 0.9534884752944156 1.0 21.227854249898417 -7.261388823735542 24.81094177042004 0.9685858382964005 1.0163717576717517 0.17232901274633927 0.044454555130094345 6.962845989618201 3418955.946501837 0.022412817628969666 0.011894570063638654 5.4778631237153676e-08 7.261388823735542 0.04778591937535115 LQSIGTENTEENRR ddPTM_KYSE-520_SHP099_60min_R1 9 LQSIGTENTEENRR 14 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;;;;;;;; 238.07 5.5454999999999995e-18 31376280000.0 13071552.0 12470083.0 10071461.0 8394992.0 11428831.0 12442717.0 10347079.0 10955387.0 11808339.0 11576929.0 False True 12346446.953067116 11871001.494703807 10720683.490967365 9192849.515633628 12328214.978546841 12365057.387811473 11393062.723079618 10917385.319503551 9664242.301602198 11474366.415774463 1.0760025003292344 1.0345670570868355 0.9343159441229829 0.8011640192172786 1.0744135695020638 1.0776244142606886 0.9929143196453033 0.9514586621963547 0.8422462688934367 1.0 23.451911158237902 -7.443456193815632 4.287452016331223 0.9143209929831302 0.9954659372488202 0.11555553535436458 0.0867264999406889 0.4972397069771443 16.669040391668847 0.05691660537364251 0.02461382064264109 3.602000810322322e-08 7.443456193815632 0.08114494426568997 LQSSSYLDDSS(ph)PTGLMK ddPTM_KYSE-520_SHP099_60min_R1 2 LQSSSYLDDSSPTGLMK 17 0 Q8WYA1-9;Q8WYA1-6;Q8WYA1-4;Q8WYA1-3;H0Y5R1;Q8WYA1-8;Q8WYA1-5;Q8WYA1-7;Q8WYA1-2;Q8WYA1 Q8WYA1-9;Q8WYA1-7 ARNTL2 Aryl hydrocarbon receptor nuclear translocator-like protein 2 1 LQSSSYLDDS(0.287)S(0.711)PT(0.002)GLMK;LQSSSYLDDS(0.354)S(0.643)PT(0.003)GLMK 122.14 9.114799999999999e-05 1141960000.0 968690.0 1160530.0 753590.0 729420.0 755210.0 1054460.0 797070.0 914510.0 1107770.0 1132830.0 True False 914954.8346643609 1104776.3968089565 802167.6171866311 798743.8574918808 814640.7304428912 1047878.7240079241 877645.6142535568 911337.7782582378 906626.8926091864 1122794.0075284038 0.8148910918027097 0.9839528795142849 0.7144388122915221 0.7113894909807618 0.7255478075058064 0.9332778025014669 0.7816621823494677 0.8116696136135936 0.8074739324668608 1.0 20.0986618384902 -6.250882178803893 24.852512237332114 0.8497239028111272 0.7922467543838727 0.12620937073167404 0.09577811818309068 1992.4048105569896 4690282.62237119 0.03328700676027194 0.032949028678042794 5.612002052545151e-07 6.250882178803893 -0.05747714842725449 LQSVQATGPSS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 5 LQSVQATGPSSPGR 14 0 D6REY2;P23508;P23508-2;A0A096LNU0 D6REY2 MCC Colorectal mutant cancer protein 1 LQSVQATGPS(0.001)S(0.999)PGR;LQSVQATGPS(0.237)S(0.763)PGR;LQSVQATGPS(0.116)S(0.884)PGR;LQSVQATGPS(0.002)S(0.998)PGR;LQSVQATGPS(0.018)S(0.982)PGR 259.68 1.2696e-24 7206950000.0 8917830.0 9703940.0 7242080.0 5458960.0 6501600.0 8021770.0 6447310.0 8011850.0 9640070.0 8349540.0 True False 8423140.192646641 9237748.15648911 7708916.064537696 5977777.917103832 7013238.930956285 7971703.1579055 7099067.014481913 7984058.762329845 7889676.294388764 8275569.571443814 1.0178320803092566 1.1162673549824833 0.9315269478415785 0.7223403616508908 0.8474629897568134 0.9632815106060066 0.857834249738941 0.9647745322424847 0.9533695809426052 1.0 22.9804271790832 -4.8748948064183955 5.753548010664787 0.8933991925943245 1.0651369815422607 0.40132972631620245 0.07919399674394141 0.18871402995998027 8.684869521358445 0.021645802732879374 0.046490781554413864 1.3338444730760482e-05 4.8748948064183955 0.17173778894793612 LQT(ph)PNT(ph)FPK ddPTM_KYSE-520_SHP099_60min_R1 10 LQTPNTFPK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 2 LQT(1)PNT(1)FPK;LQT(1)PNT(1)FPK;LQT(1)PNT(1)FPK;LQT(1)PNT(1)FPK;LQT(1)PNT(1)FPK;LQT(1)PNT(1)FPK;LQT(1)PNT(1)FPK;LQT(1)PNT(1)FPK;LQT(1)PNT(1)FPK;LQT(1)PNT(1)FPK 155.88 0.00043305 11585810000.0 21971530.0 22488170.0 20994980.0 21428920.0 22390680.0 19527080.0 20410060.0 21121800.0 25566710.0 21226250.0 True False 20752725.431740828 21407804.557768684 22348350.00395571 23465518.113960296 24152699.13045779 19405204.250517458 22473308.04778995 21048533.405665178 20924439.94831078 21038201.9387726 0.9864305653181487 1.0175681657620617 1.062274716679497 1.1153765983543606 1.1480400844496739 0.9223794080403045 1.068214294795436 1.0004910812683825 0.9945925991777766 1.0 24.32650807203257 -6.263073689403679 24.99975751005998 1.0016085996408761 1.0657938792583312 0.2907378202022298 0.05350343356312061 229.1300094577697 3504937.8448735527 0.019543684229992874 0.018106040799745156 5.456652668693551e-07 6.263073689403679 0.06418527961745513 LQTLS(ph)PSHK ddPTM_KYSE-520_SHP099_60min_R1 4 LQTLSPSHK 9 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 LQT(0.014)LS(0.946)PS(0.04)HK;LQT(0.001)LS(0.813)PS(0.185)HK;LQT(0.041)LS(0.951)PS(0.007)HK;LQTLS(0.996)PS(0.004)HK 162.31 0.00013185 3289290000.0 4419420.0 4411480.0 3572270.0 3369740.0 3156040.0 3582380.0 3307520.0 3302640.0 4000070.0 3693840.0 True False 4174265.9627046427 4199545.879033524 3802544.2400340857 3689999.076450724 3404402.392588789 3560021.037603615 3641876.399884478 3291183.912681973 3273758.1215588297 3661115.4513640297 1.1401623407285415 1.147067317275911 1.0386299723537435 1.0078892964372193 0.9298811899855285 0.9723869910404629 0.9947450301048596 0.8989566039103655 0.8941969093979591 1.0 21.803851838318753 -5.037161267411413 1.2371736405547555 0.9452518680361602 1.1635570234218497 0.8123858425405562 0.03620901474700947 0.22908143630722688 0.6243610950960415 0.012528576427678335 0.04517922471633445 9.179916535666684e-06 5.037161267411413 0.2183051553856895 LQWDGSSDLS(ph)PSDSGSSK ddPTM_KYSE-520_SHP099_60min_R1 2 LQWDGSSDLSPSDSGSSK 18 0 K7EJK2;K7ENU1;K7EKG9;Q14CW9;Q14CW9-2 K7EJK2 ATXN7L3 Ataxin-7-like protein 3 1 LQWDGSSDLS(0.98)PS(0.02)DSGSSK;LQWDGSSDLS(1)PSDSGSSK 284.48 9.209799999999999e-38 718270000.0 1434740.0 1304160.0 1200890.0 1065310.0 1149210.0 1302880.0 1177300.0 1182340.0 1506660.0 1287400.0 True False 1355152.112116718 1241506.1960159296 1278301.2908919356 1166556.7421028703 1239646.2888895457 1294748.242641202 1296312.973340751 1178238.7385002319 1233088.5238077915 1275994.6375820453 1.0620358990572818 0.9729713271903165 1.001807729626718 0.9142332637960335 0.9715137135988454 1.0146972444137334 1.015923527544918 0.9233884718614048 0.96637437767328 1.0 20.2831908354567 -4.2608046161574755 24.025770828941752 0.9745091514856591 1.0620359420103596 0.37759966041662574 0.033240408900576494 34.0299127875831 1287508.4111732827 0.008563422336272967 0.04955635630228544 5.485236835996609e-05 4.2608046161574755 0.08752679052470047 LQY(ph)S(ph)IPMIIPR ddPTM_KYSE-520_SHP099_60min_R1 1 LQYSIPMIIPR 11 0 B9EIJ4;O14649 B9EIJ4 KCNK3 Potassium channel subfamily K member 3 2 LQY(1)S(1)IPMIIPR 61.765 0.022044 241910000.0 16598.0 13226.0 25342.0 17904.0 19212.0 19106.0 13142.0 18279.0 18588.0 23510.0 True False 15677.275852707302 12590.603107369268 26975.585868633636 19605.590776966106 20723.875098672965 18986.752366989145 14470.521613559971 18215.594415350664 15212.887765348007 23301.71969050323 0.6727948005956265 0.5403293522795509 1.1576650233084607 0.8413795650007967 0.8893710581849938 0.8148219367142814 0.6210065954684679 0.7817274715039402 0.6528654523102911 1.0 14.508148810712648 -9.499966401979751 14.784980628635585 0.9999128935162575 0.7812407284870506 0.14366028169220546 0.16434294600682225 0.0 0.0 0.16462392975738305 0.03992716769964428 3.16252231070648e-10 9.499966401979751 -0.21867216502920683 LQYKT(ph)PPPSYNSALAQPVTTVPSMGETER ddPTM_KYSE-520_SHP099_60min_R1 1 LQYKTPPPSYNSALAQPVTTVPSMGETER 29 1 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 LQYKT(0.948)PPPS(0.037)YNS(0.015)ALAQPVTTVPSMGETER 121.15 0.00062636 374230000.0 219860.0 237680.0 199230.0 198550.0 186530.0 231220.0 186040.0 259130.0 268360.0 273900.0 True False 207663.9275199561 226261.49603504688 212072.68457927072 217420.13230376592 201208.84978947873 229776.8702132961 204846.73877542964 258231.1385113965 219632.58880507777 271473.4590909752 0.7649511234553671 0.8334571519170976 0.7811912269044382 0.8008890925536293 0.7411731904224581 0.8464063889807147 0.7545737231969412 0.9512205700552814 0.809038900305445 1.0 18.050451632652365 -8.23504913119742 0.5492129854086106 1.0032565691862398 0.7852712700611522 0.5793850548118253 0.05241863688554281 0.8239431617208457 0.540781439110132 0.05888478536531994 0.02385086990772761 5.820373688788077e-09 8.23504913119742 -0.21798529912508768 LRAPS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 5 LRAPSSR 7 1 Q6EEV4-2;Q6EEV4 Q6EEV4-2 POLR2M DNA-directed RNA polymerase II subunit GRINL1A, isoforms 4/5 1 LRAPS(0.754)S(0.246)R;LRAPS(0.787)S(0.213)R;LRAPS(0.787)S(0.213)R;LRAPS(0.787)S(0.213)R;LRAPS(0.752)S(0.248)R 65.535 0.022397999999999998 2075390000.0 655370.0 547346.0 537428.0 463875.0 500066.0 594680.0 594490.0 670150.0 783350.0 712840.0 True False 619015.3196522946 521050.6765769046 572071.4687952029 507961.5405308959 539418.3492136687 590968.3815346537 654586.850863283 667825.4060641859 641113.3866465109 706524.7921811282 0.876140974106965 0.7374839246169376 0.8096976569345126 0.7189578428844042 0.7634811335472298 0.8364439409270583 0.9264881545663721 0.9452257209581103 0.9074181030043061 1.0 19.43038066051508 -6.651358866645478 2.513198556384571 0.9442304517786481 0.7772840665205016 0.7435030975610588 0.04543400542049244 0.14213254483453494 1.8254213283917278 0.0195336998566055 0.014037492904495989 2.2317273375627167e-07 6.651358866645478 -0.16694638525814642 LRDDFEK ddPTM_KYSE-520_SHP099_60min_R1 5 LRDDFEK 7 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ;;;; 156.51 0.0012507999999999998 2384410000.0 5239830.0 4564870.0 3118570.0 2827620.0 4877140.0 4898710.0 3649380.0 4094720.0 3995130.0 4069760.0 False True 4949166.184557857 4345566.793190433 3319598.0120884213 3096356.1546450504 5260943.17086934 4868135.333805789 4018294.944916564 4080516.372034836 3269715.1010315684 4033705.0926253637 1.2269529058051836 1.0773139566239562 0.8229649753417742 0.7676208556510428 1.3042458608309464 1.2068644638166472 0.9961796543488086 1.0116050326770432 0.810598451287239 1.0 21.943674180553323 -7.581881635407279 6.983525935173601 0.9047981354002034 1.049936465860276 0.1154975832325329 0.16536784007774158 0.5491986463001501 51.92031972412883 0.12282753404307066 0.0456855120913929 2.6188966769690828e-08 7.581881635407279 0.14513833046007252 LRDDFEKK ddPTM_KYSE-520_SHP099_60min_R1 1 LRDDFEKK 8 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 111.46 0.011715 727990000.0 1140500.0 900570.0 739070.0 686780.0 1058700.0 974870.0 653640.0 684270.0 846830.0 713140.0 False True 1077234.1914696165 857305.2654168706 786711.6347538099 752051.3647120631 1142013.666821002 968785.4747203357 719716.3101116532 681896.427079819 693067.0188470872 706822.134414524 1.5240527128680157 1.212900988346941 1.113026313763448 1.0639895499806376 1.6157016188619455 1.370621302801732 1.0182424616736285 0.9647355308767298 0.9805394951605039 1.0 19.430987693599207 -6.808738896302114 6.844842628922795 0.9849971433186612 1.3047138262381714 0.5003429648745739 0.15929599625154522 0.1991796354341572 21.92211169850418 0.07210243741357245 0.048908618109669226 1.5533206065758072e-07 6.808738896302114 0.3197166829195103 LRDDTELRK ddPTM_KYSE-520_SHP099_60min_R1 2 LRDDTELRK 9 2 P16930;P16930-2;H0YLC7 P16930 FAH Fumarylacetoacetase 0 ; 125.68 0.00043759 1199450000.0 1979870.0 1710070.0 1192490.0 972660.0 1598500.0 1503940.0 1051570.0 1383070.0 1333300.0 1154550.0 False True 1870042.6643270038 1627915.6703326 1269359.8134514603 1065101.3139591066 1724292.855779133 1494553.352601782 1157872.957934201 1378272.4529809663 1091206.329757828 1144321.5852263083 1.6341932971203827 1.4226033060546113 1.1092684345375026 0.9307709718229822 1.5068254221894504 1.3060606143387652 1.0118422765792823 1.2044450360589767 0.953583628803108 1.0 20.1260611146345 -4.569700079156531 3.1832819116129083 1.1441158513060858 1.6113785298909948 0.48987147177802914 0.16897212667206304 0.21986293507775245 4.327591399833083 0.04577705670188358 0.17669477803992517 2.6933942017001985e-05 4.569700079156531 0.467262678584909 LRDEELAELEDALR ddPTM_KYSE-520_SHP099_60min_R1 3 LRDEELAELEDALR 14 1 Q15628-2;Q15628 Q15628-2 TRADD Tumor necrosis factor receptor type 1-associated DEATH domain protein 0 ;; 213.83 9.5397e-14 180092000.0 104481.0 101274.0 65591.0 63206.0 94652.0 100222.0 74264.0 80379.0 82197.0 75284.0 False True 98685.23065229019 96408.6450246269 69819.10080931066 69213.07923642316 102100.57390378893 99596.47732253672 81771.32986679472 80100.18400959972 67272.09681774849 74617.04233006576 1.3225561824838847 1.2920459189224733 0.9356991195184128 0.9275773613521378 1.368327807100029 1.3347684954058532 1.095880073952573 1.073483771378655 0.9015647728326303 1.0 16.187217555298975 -7.380321687616992 2.283132622446477 0.9582355613252335 1.1834629171214281 0.27588601179446026 0.15078957641828977 0.49435426362173784 4.806694896246995 0.12477095564294026 0.04699821760588833 4.165607171829172e-08 7.380321687616992 0.22522735579619468 LRDEYR ddPTM_KYSE-520_SHP099_60min_R1 2 LRDEYR 6 1 K7EIT8;E7EVE9;A8MX75;P18074-2;P18074 K7EIT8 ERCC2 TFIIH basal transcription factor complex helicase XPD subunit 0 ; 120.52 0.06161900000000001 0.0 141763.0 124949.0 88321.0 101644.0 143220.0 114999.0 109798.0 121187.0 106683.0 114678.0 False True 133899.12379246578 118946.26248772748 94014.31297859643 111304.21519961706 154490.5991896701 114281.24858428692 120897.45336521503 120766.63058225857 87312.05645957726 113662.04213813391 1.1780460853390058 1.0464906335500432 0.8271390449270696 0.9792558105224665 1.3592101310472415 1.005447785685572 1.063657234121202 1.0625062537191654 0.7681725122751761 1.0 16.794391015720777 -7.733638102804477 24.10254425703068 0.8840863574094177 1.0615487503158505 0.2124947320077898 0.13933606952257963 202.13388600739606 175242.64156740645 0.09720441264008901 0.0367178111478512 1.8465535096005678e-08 7.733638102804477 0.17746239290643284 LRDFVLVK ddPTM_KYSE-520_SHP099_60min_R1 1 LRDFVLVK 8 1 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 0 131.5 0.00086468 198030000.0 185220.0 148910.0 122200.0 117650.0 186920.0 158370.0 125980.0 118590.0 137380.0 132680.0 False True 174945.47737308417 141756.14008153306 130077.20752691301 128831.42062723765 201629.5405706823 157381.55408563136 138715.2878463161 118178.63896911408 112435.25506797445 131504.55842347804 1.33033774243563 1.0779560935450034 0.9891459968104787 0.9796726605656344 1.5332513411541524 1.196776415756044 1.0548325435200328 0.8986657222067457 0.8549913129695809 1.0 17.00475328384765 -7.040300072620527 3.1961333961238996 0.9094379586407958 1.1761163034472746 0.36579120788596475 0.15712449140194554 0.3078330383112863 6.309139239333516 0.08594584118056708 0.048572059881879695 9.113809097327765e-08 7.040300072620527 0.2666783448064788 LRDLEDSLAR ddPTM_KYSE-520_SHP099_60min_R1 4 LRDLEDSLAR 10 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ;;; 197.73 2.0348e-06 2048960000.0 1707970.0 1633070.0 1360720.0 811030.0 1554940.0 1376600.0 889160.0 986060.0 1519110.0 1104070.0 False True 1613225.4993462162 1554614.8659119555 1448434.1884289794 888110.04735494 1677304.9316016305 1368008.1287761582 979044.9701653449 982639.5880081342 1243277.9176467524 1094288.798753462 1.4742228022290742 1.4206623221245296 1.3236306449256678 0.8115865284983392 1.5327808650808636 1.250134452929152 0.8946860931781492 0.8979709827309657 1.1361515525545072 1.0 20.061562105941654 -1.0000000000142564 0.24544471438692333 0.9578937632500443 4.399129014280399 0.3716487037542663 0.19819459742405923 55.60209299470779 0.7500411964575403 0.27447440777421983 78.53965188917414 0.09999999999671735 1.0000000000142564 3.441235251030355 LREDLER ddPTM_KYSE-520_SHP099_60min_R1 6 LREDLER 7 1 P62269;J3JS69 P62269 RPS18 40S ribosomal protein S18 0 ;;;;; 171.53 0.00063038 8715670000.0 4141227.0 3511421.0 2581848.0 2325893.0 3689460.0 3461508.0 2838120.0 3067490.0 2958336.0 2961486.0 False True 3911504.882978641 3342727.0644096276 2748278.0531828594 2546945.1714147734 3979799.5118441535 3439903.4445908065 3125024.86698195 3056849.5931475447 2421176.75598174 2935249.5380412424 1.332597052579344 1.138822107315722 0.936301332327897 0.8677099300778383 1.3558641131751825 1.1719287917463845 1.0646538996024675 1.0414275016588364 0.8248623241748112 1.0 21.485051727511735 -7.470940130289422 2.7437309403057033 0.9149224853669242 1.1189401428940284 0.23590443682929907 0.14894001874442014 0.45414644131836296 6.512036862758238 0.11887738453994112 0.04311524421263362 3.381114433812758e-08 7.470940130289422 0.2040176575271042 LREEIEELKR ddPTM_KYSE-520_SHP099_60min_R1 1 LREEIEELKR 10 2 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 0 215.08 2.9124e-09 313810000.0 428690.0 369610.0 277850.0 247940.0 423940.0 365980.0 295230.0 319610.0 298170.0 295980.0 False True 404909.71112767194 351853.3808040791 295760.6555757188 271504.14305412094 457301.66611135803 363695.7830666117 325074.72956713627 318501.3475075348 244029.84425402473 293357.8474689556 1.3802586657257268 1.1993999268804758 1.0081907067681817 0.9255049605681767 1.5588526779047616 1.2397683791469036 1.1081166990139477 1.0857093145982397 0.8318504050921938 1.0 18.162302059775275 -7.395143959613108 2.0921683669811104 0.923880975449078 1.2050917946305548 0.3009195496274977 0.17300759911051858 0.46736902935100944 3.7622928672635805 0.1432544302848504 0.052137220121089616 4.025835641038067e-08 7.395143959613108 0.28121081918147683 LREEWQR ddPTM_KYSE-520_SHP099_60min_R1 5 LREEWQR 7 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDG6;H0YDQ3;U3KQE6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 0 ;;;; 166.68 0.00083546 3622650000.0 2401080.0 1938670.0 1455460.0 1357160.0 2276840.0 1913320.0 1620380.0 1667770.0 1728290.0 1687430.0 False True 2267887.3059656858 1845533.3831970019 1549281.280418337 1486144.0783549673 2456014.354552497 1901378.2601699824 1784183.8237848328 1661984.895130446 1414476.1026454319 1672480.6830006726 1.3560020925902518 1.1034706720114984 0.9263373240513021 0.8885866924864027 1.468485932014504 1.1368611186340487 1.0667888974261566 0.993724419075863 0.8457353899643594 1.0 20.673558117291016 -7.2394066068850496 2.3525133325913288 0.9255068929971811 1.135234757348515 0.22379652234412306 0.1671653807873911 0.5337288890379062 5.667691034010649 0.11652098649111337 0.05101210448760015 5.76226720254615e-08 7.2394066068850496 0.20972786435133395 LREQEKEEK ddPTM_KYSE-520_SHP099_60min_R1 1 LREQEKEEK 9 2 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;A0A087WT54 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 0 53.756 0.040767000000000005 586220000.0 499410.0 492100.0 368890.0 334720.0 565320.0 469610.0 400820.0 434670.0 468580.0 414520.0 False True 471706.73175084655 468458.77734284074 392669.2396448689 366531.68816276285 609807.4677691966 466678.98979701527 441338.797226229 433162.2312227408 383497.68394054053 410847.6752916797 1.1481304632330223 1.140224967830864 0.9557538310666962 0.8921352369890985 1.484266565062748 1.1358929789871595 1.074215150208413 1.0543134530704572 0.9334303368475382 1.0 18.648244077991684 -7.418174649292132 2.165129983978334 0.9700796725895522 1.1214560095258872 0.14333853557475473 0.1475381024446166 0.7252963741417328 6.266986350519203 0.12311538560672607 0.04421455421259932 3.8179070479600096e-08 7.418174649292132 0.151376336936335 LREQLQLLEEQHR ddPTM_KYSE-520_SHP099_60min_R1 4 LREQLQLLEEQHR 13 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;; 187.98 2.7291e-08 1311001000.0 1172349.0 1014611.0 830972.0 732342.0 1232441.0 881723.0 749858.0 743916.0 844001.0 725139.0 False True 1107316.4639502089 965867.5645978396 884537.7847222087 801943.563493349 1329427.0950699355 876219.8396984602 825660.9645488396 741335.5290272993 690751.6939338003 718714.8326096048 1.540689594410648 1.3438814962129555 1.230721483109667 1.1158021611736415 1.8497282019947687 1.2191481237655348 1.1488018990103774 1.031473813244622 0.9610928599118065 1.0 19.45505993468765 -6.7957724038816165 2.446928706011263 1.0108441815635474 1.3920253598605112 0.47319690650637936 0.1887025603495557 0.28144745142409044 3.4398779050552046 0.09291401943940274 0.0601741308408698 1.60039651177077e-07 6.7957724038816165 0.38118117829696385 LRESTPGDS(ph)PSTVNK ddPTM_KYSE-520_SHP099_60min_R1 1 LRESTPGDSPSTVNK 15 1 Q5T6F2 Q5T6F2 UBAP2 Ubiquitin-associated protein 2 1 LRES(0.385)T(0.064)PGDS(0.473)PS(0.068)T(0.01)VNK 89.40299999999999 0.0037335999999999997 646590000.0 1947500.0 1684000.0 1634500.0 1659300.0 1726300.0 1556000.0 1470300.0 1529900.0 1855000.0 1643400.0 True False 1839468.2927549987 1603098.112264466 1739862.4852924652 1816999.3731132655 1862149.9886966024 1546288.4268311053 1618932.272745183 1524593.1339813434 1518178.7607445964 1628840.754545853 1.1293113139644348 0.9841957280295554 1.0681599661825547 1.1155168901823518 1.1432363682573745 0.9493183557174902 0.9939168505128467 0.9359988873844358 0.9320608884002838 1.0 20.635414133373523 -6.276563679439015 24.660489744663387 0.9602375322856768 1.0827296324488866 0.6519448125403119 0.045872809258150384 463.5648484106945 755849.5954146732 0.016872048954055398 0.014941641637461046 5.28976429123069e-07 6.276563679439015 0.12249210016320988 LREVIEIEDAS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 1 LREVIEIEDASPTK 14 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100 P46100-2 ATRX Transcriptional regulator ATRX 1 LREVIEIEDAS(0.999)PT(0.001)K 88.264 0.0018319000000000002 206620000.0 184750.0 197820.0 181960.0 148120.0 160520.0 201690.0 163590.0 185590.0 230060.0 210520.0 True False 174501.54921000573 188316.43026612658 193689.432746294 162197.28026609807 173152.010766135 200431.17789689315 180127.27368454385 184946.2316070318 188286.90334064772 208654.95658208156 0.836316338075389 0.9025255539139128 0.9282762121689625 0.7773468836926106 0.8298485384794573 0.9605867082196377 0.8632781920696172 0.8863735357002022 0.9023840431347656 1.0 17.6707596665524 -6.24691425611113 24.886006724319035 0.9117199510805867 0.8572827362209869 0.27948019862053686 0.05284551596376308 1317.4146023765634 2257137.477893947 0.01797223026264609 0.01790118389169702 5.663510941701215e-07 6.24691425611113 -0.054437214859599736 LRGQS(ph)TDSLPQTICR ddPTM_KYSE-520_SHP099_60min_R1 2 LRGQSTDSLPQTICR 15 1 Q96NE9-3;Q96NE9-2;Q96NE9 Q96NE9-3 FRMD6 FERM domain-containing protein 6 1 LRGQS(0.976)T(0.024)DSLPQTICR;LRGQS(0.971)T(0.029)DSLPQTICR 124.35 6.0789e-05 881040000.0 515570.0 566840.0 445990.0 370030.0 481180.0 504600.0 374200.0 409430.0 591900.0 430130.0 True False 486970.3043366853 539608.1555558133 474739.22900923016 405197.5399464237 519046.128460309 501450.60422813444 412027.7878400655 408009.7828916808 484425.8805847583 426319.38283607614 1.1422663944977842 1.265736856640407 1.1135764596276212 0.9504553540372948 1.2175053477685465 1.176232243751739 0.9664767881278673 0.9570519176899925 1.1362980434108592 1.0 18.7015751241224 -3.7855333573428327 0.23814581115713515 0.9956720259471054 1.4184038839920639 0.22944243990115099 0.09633926244327472 20.653679353001806 0.8436500637605095 0.15723869403938742 2.6704264852374844 0.00016385762004931227 3.7855333573428327 0.4227318580449585 LRIDYER ddPTM_KYSE-520_SHP099_60min_R1 2 LRIDYER 7 1 P15924 P15924 DSP Desmoplakin 0 ; 110.38 0.0032819000000000004 567010000.0 442150.0 418450.0 299700.0 249740.0 406700.0 336710.0 264320.0 299360.0 346920.0 273580.0 False True 417623.0580958273 398347.0338937451 319019.14153695485 273475.21451293124 438704.97619354044 334608.4679937674 291040.045114607 298321.59003114945 283928.07314151793 271156.2940420193 1.5401562393057011 1.4690679974849337 1.176513872429303 1.0085519699223822 1.617904455227424 1.2340059048819843 1.0733294838050356 1.1001831658936914 1.0471011714650424 1.0 18.048765132814353 -1.0000000000019018 0.1720454490806367 0.956048945688038 3.2105702690421647 0.4459175439572314 0.16365521218531645 61.70378873422418 0.6727110239560932 0.4429929112400065 35.93386481356541 0.09999999999956209 1.0000000000019018 2.2545213233541266 LRLCDDGPQLPTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 LRLCDDGPQLPTSPR 15 1 O60504-2;O60504;H0YB51;H0YAZ3 O60504-2 SORBS3 Vinexin 1 LRLCDDGPQLPT(0.024)S(0.976)PR;LRLCDDGPQLPT(0.038)S(0.962)PR 148.24 4.3524e-06 2166700000.0 1013980.0 1219010.0 1262620.0 690880.0 782330.0 781720.0 591550.0 632550.0 1467030.0 764940.0 True False 957732.508080983 1160446.9298286857 1344010.5054634283 756541.0274793541 843894.920151199 776840.9955156898 651349.646971648 630355.8316882796 1200654.3328167906 758163.2267143138 1.2632273293332248 1.530603027078703 1.7727191956909163 0.9978603562164443 1.1130781478395153 1.0246355509516343 0.8591153250658586 0.8314249616406234 1.583635674365427 1.0 19.53214895742455 -5.277347652717037 24.766707746325128 1.0440626417900207 1.5230251692795336 0.4688898410121378 0.22575995824260506 583.765783155271 908831.2816594621 0.06336723656932428 0.09434718242515687 5.280224006390106e-06 5.277347652717037 0.47896252748951285 LRLDT(ph)GSPEPETR ddPTM_KYSE-520_SHP099_60min_R1 1 LRLDTGSPEPETR 13 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LRLDT(0.5)GS(0.5)PEPETR 110.44 0.00096549 0.0 219340.0 205550.0 193730.0 176330.0 184040.0 194890.0 175260.0 157600.0 233590.0 175230.0 True False 207172.7729565503 195675.06946316003 206218.14577895982 193088.35018445255 198522.900955641 193673.6192192252 192976.9911727684 157053.3223841165 191175.9443247061 173677.59852687723 1.1928583462333489 1.126656927104382 1.1873617986895806 1.1117631279002942 1.1430541568947297 1.115132986994022 1.1111219455450065 0.904280826751597 1.1007518870956805 1.0 17.406052157222234 -7.073345188471805 6.897611349273973 1.0017373908810576 1.1429358753245458 0.6183501808060313 0.05079763821392865 0.16054282191524644 12.809635296297898 0.022347368630545195 0.012891538162110394 8.446072626319933e-08 7.073345188471805 0.14119848444348815 LRLDTGPQSLS(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 7 LRLDTGPQSLSGK 13 1 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 LRLDTGPQS(0.039)LS(0.961)GK;LRLDT(0.003)GPQS(0.083)LS(0.914)GK;LRLDTGPQS(0.002)LS(0.998)GK;LRLDTGPQS(0.006)LS(0.994)GK;LRLDTGPQS(0.029)LS(0.971)GK;LRLDTGPQS(0.023)LS(0.977)GK;LRLDTGPQS(0.001)LS(0.999)GK 189.44 1.6724e-08 3598580000.0 4415470.0 3587980.0 3553140.0 3132060.0 3267130.0 3157290.0 2968540.0 2992230.0 3959540.0 3022030.0 True False 4170535.077078779 3415608.0551322186 3782181.0896250047 3429730.0407118197 3524234.543573152 3137584.181972738 3268628.993358493 2981850.652521732 3240587.347880674 2995257.1653037644 1.3923796345065496 1.140338831235489 1.262723325875571 1.145053613573108 1.1766049955232278 1.0475174613778244 1.0912682327318644 0.9955240862329519 1.081906216741169 1.0 21.514248443851066 -1.0000000000011324 0.23015587845557284 0.9902713114462985 2.971437486957528 0.7628190902356472 0.056471033635706526 23.148979831108733 0.30293723984573734 0.07789750310822398 17.28747474973351 0.09999999999973926 1.0000000000011324 1.9811661755112295 LRLDTGS(ph)PEPETR ddPTM_KYSE-520_SHP099_60min_R1 3 LRLDTGSPEPETR 13 1 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LRLDT(0.361)GS(0.639)PEPETR;LRLDT(0.086)GS(0.914)PEPETR;LRLDT(0.068)GS(0.932)PEPETR 82.57799999999999 0.004207 0.0 660180.0 659390.0 594860.0 544240.0 614250.0 571770.0 514850.0 564110.0 760660.0 624670.0 True False 623558.499363797 627711.914635432 633205.6274096522 595964.4059682777 662587.9803955792 568201.3713426874 566896.0624517839 562153.2340742637 622543.318678159 619135.9097859062 1.007143164381178 1.0138515707358846 1.022724764306776 0.9625744469810497 1.0701817967959548 0.9177328634340856 0.9156245882229855 0.907964188781512 1.005503490975723 1.0 19.23989661223125 -6.279319833084353 24.997515517620773 0.941504008961853 1.0126987820710223 0.39938504961863264 0.03978304874494068 779.8532532151145 1090259.193167363 0.013542289516371342 0.011967630315732617 5.256300273208897e-07 6.279319833084353 0.07119477310916922 LRLPLDKEPAR ddPTM_KYSE-520_SHP099_60min_R1 2 LRLPLDKEPAR 11 2 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 161.99 1.3244e-05 1078710000.0 1574090.0 1322580.0 1069960.0 895090.0 1630480.0 1201520.0 1006780.0 1040620.0 1152980.0 978500.0 False True 1486772.089829378 1259041.2715669458 1138931.3335965297 980159.0844813774 1758789.499837825 1194020.867998787 1108555.1476259236 1037010.3321025347 943627.8962605422 969831.2512614804 1.5330214281046333 1.2982065384357162 1.174360314864155 1.0106491033429408 1.8135005420274195 1.2311635312284466 1.1430392103615985 1.0692688349170776 0.9729815316150568 1.0 19.887374217461154 -6.8759667761913486 2.408910489312647 1.022402093976123 1.3430523469492566 0.35890266407610427 0.20259473706430906 0.37104941780015377 4.362098978947005 0.10563316675233596 0.06425713123668986 1.3305562024944905e-07 6.8759667761913486 0.32065025297313365 LRLPS(ph)PSMDK ddPTM_KYSE-520_SHP099_60min_R1 1 LRLPSPSMDK 10 1 D6RAU9;Q9NQ86-4;Q9NQ86 D6RAU9 TRIM36 E3 ubiquitin-protein ligase TRIM36 1 LRLPS(0.719)PS(0.281)MDK 95.17 0.0046904 0.0 734460.0 615010.0 556730.0 530990.0 694450.0 704750.0 658360.0 639800.0 772570.0 755350.0 True False 693718.0396902888 585463.9964511703 592617.7065994954 581455.1299520351 749099.2641200001 700351.3938362608 724913.453774413 637580.6831304429 632290.7629048268 748658.1866534069 0.9266151790729662 0.7820177577543972 0.7915731333261291 0.7766630223483032 1.0005891573410355 0.9354755031357055 0.9682836128659251 0.8516312176862795 0.8445653492834204 1.0 19.51394765510062 -5.750403243290644 24.999889770090256 0.9278512476274637 0.8145855752625826 0.43372992863674287 0.06365076567366937 220.5328667839457 499565.3426807944 0.01947684467840277 0.02490379520001602 1.776629040372454e-06 5.750403243290644 -0.11326567236488116 LRLPS(ph)PSMDKIDR ddPTM_KYSE-520_SHP099_60min_R1 1 LRLPSPSMDKIDR 13 2 D6RAU9;Q9NQ86-4;Q9NQ86 D6RAU9 TRIM36 E3 ubiquitin-protein ligase TRIM36 1 LRLPS(0.907)PS(0.093)MDKIDR 56.746 0.040432 991830000.0 486000.0 499740.0 420780.0 402630.0 446430.0 372650.0 343450.0 338540.0 539630.0 416290.0 True False 459040.611183019 475731.74027496774 447904.1520718046 440895.8341448761 481561.5011607623 370324.1531225012 378169.27774898557 337365.68375582976 441646.7949652863 412601.9944687193 1.1125506355685355 1.1530039763562863 1.0855598326628102 1.0685741708849201 1.1671332364276077 0.8975335991755045 0.9165473817835745 0.8176540304664149 1.0703942319376476 1.0 18.654391269493434 -6.265591453156496 24.97958484202748 0.9275368152876418 1.1148668650217264 0.6275126713835357 0.0677848388970621 217.41855444250106 1308022.099935398 0.02263541105317664 0.02068839185681371 5.425109980527207e-07 6.265591453156496 0.18733004973408462 LRLPSPS(ph)MDKIDR ddPTM_KYSE-520_SHP099_60min_R1 2 LRLPSPSMDKIDR 13 2 D6RAU9;Q9NQ86-4;Q9NQ86 D6RAU9 TRIM36 E3 ubiquitin-protein ligase TRIM36 1 LRLPS(0.169)PS(0.831)MDKIDR;LRLPS(0.409)PS(0.591)MDKIDR 82.48200000000001 0.0050798 1296980000.0 1566620.0 1505050.0 1337680.0 1287900.0 1502770.0 1426800.0 1425380.0 1358520.0 1947030.0 1351280.0 True False 1479716.4656204558 1432745.1388738945 1423908.993163675 1410301.6287787468 1621029.4494083286 1417894.8119554124 1569471.3207682306 1353807.6112009517 1593498.432632103 1339308.7104799303 1.1048359904194243 1.0697646686404974 1.06316712645991 1.0530071355045372 1.210347873290129 1.0586766149286981 1.1718517982353922 1.0108256599897911 1.189791733722904 1.0 20.35305710933298 -2.12798046017091 12.69910781211265 1.0954012986066823 1.1089408026368235 0.0 0.07010895385445007 0.0 0.0 0.014736930671022726 0.0 0.0074476548172950656 2.12798046017091 0.013539504030141147 LRLS(ph)PS(ph)PTSQR ddPTM_KYSE-520_SHP099_60min_R1 7 LRLSPSPTSQR 11 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 LRLS(1)PS(0.985)PT(0.012)S(0.003)QR;LRLS(0.75)PS(0.75)PT(0.475)S(0.025)QR;LRLS(1)PS(0.805)PT(0.162)S(0.033)QR;LRLS(0.998)PS(0.964)PT(0.027)S(0.011)QR;LRLS(0.998)PS(0.765)PT(0.13)S(0.107)QR;LRLS(0.998)PS(0.411)PT(0.411)S(0.18)QR;LRLS(0.995)PS(0.874)PT(0.128)S(0.004)QR 108.66 0.00028220000000000003 195570800000.0 44625850.0 41831780.0 39515670.0 37293630.0 38978040.0 37767470.0 35858950.0 36101280.0 46506980.0 38686830.0 True False 42150365.141073585 39822118.49801813 42062913.31550745 40838005.3824613 42045389.993289545 37531749.2105983 39483922.6156267 35976053.08578208 38062484.77755995 38344094.78409831 1.0992661419811056 1.0385463191201156 1.0969854302819888 1.0650402783637296 1.0965284284329018 0.9788143238724493 1.029726293916869 0.9382423366192417 0.9926557137905065 1.0 25.192501075533386 -6.2658742687248035 24.99671045437555 0.9866427860677648 1.077203991187957 0.7388691798922233 0.02714497741516257 192.1704152769438 1083140.8284078871 0.00905999853115867 0.008260283343835538 5.421578261476155e-07 6.2658742687248035 0.09056120512019217 LRLS(ph)PSPTS(ph)QR ddPTM_KYSE-520_SHP099_60min_R1 1 LRLSPSPTSQR 11 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 LRLS(0.816)PS(0.313)PT(0.254)S(0.617)QR 149.35 0.00019481 57723000000.0 8361700.0 7337500.0 7423800.0 6585300.0 6317300.0 6231000.0 5941400.0 6701800.0 7166800.0 5865300.0 True False 7897859.832364301 6984995.486187954 7902350.026499973 7211164.932057365 6814435.569479844 6192110.017727904 6542014.694476122 6678553.020011881 5865489.780325805 5813338.005134346 1.3585757142263022 1.2015464230737658 1.3593481093857969 1.240451686395743 1.172207011438407 1.065155683749857 1.1253456600490472 1.1488327384565247 1.008971055036779 1.0 22.470935363005697 -5.935060479294589 0.4180046996159089 1.0112659938761297 1.370786805432872 0.7714650432916577 0.0576848963991268 0.8062098153254226 0.26804234514792963 0.05809520710178358 0.12387089414075314 1.1612868832519893e-06 5.935060479294589 0.3595208115567423 LRLS(ph)PSPTSQR ddPTM_KYSE-520_SHP099_60min_R1 5 LRLSPSPTSQR 11 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 LRLS(0.999)PS(0.001)PTSQR;LRLS(1)PSPTSQR;LRLS(0.902)PS(0.097)PTSQR;LRLS(0.995)PS(0.005)PTSQR;LRLS(0.887)PS(0.112)PT(0.001)SQR 105.95 0.0010456 33439000000.0 12157850.0 11313190.0 10106857.0 9614770.0 9893718.0 10658349.0 9210179.0 10117623.0 12113123.0 9666661.0 True False 11483429.824426902 10769687.370955622 10758361.173762975 10528554.850014001 10672297.319044992 10591826.290377181 10141233.77600488 10082527.32728395 9913685.210181605 9581021.904088447 1.1985600220292423 1.124064580873147 1.1228824316926078 1.098896856244658 1.1138996889769006 1.1055006862949974 1.0584709937545784 1.0523436255772987 1.0347210672747968 1.0 23.19174811018482 -1.0000000000000142 0.12314676854228025 0.9591941462124799 1.6635903358474917 0.9031901597928221 0.0166036786462709 27.272906648229853 0.23023948906437508 0.1113251269941749 3.307684027376393 0.09999999999999673 1.0000000000000142 0.7043961896350118 LRLS(ph)TDTVEHSLDNK ddPTM_KYSE-520_SHP099_60min_R1 2 LRLSTDTVEHSLDNK 15 1 P42575;P42575-2 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 1 LRLS(0.821)T(0.136)DT(0.043)VEHSLDNK;LRLS(0.796)T(0.204)DTVEHSLDNK 188.26 3.2925e-11 829500000.0 538440.0 525950.0 536170.0 634190.0 551010.0 720010.0 808400.0 986530.0 1096130.0 824250.0 True False 508571.6598464707 500682.5725329555 570732.3761023323 694463.2269238238 594371.3521819582 715516.1505158514 890120.9612237001 983107.957687834 897100.4231886661 816947.7862567956 0.6225265168741256 0.6128697340953112 0.698615487676872 0.8500705168757621 0.7275512121837444 0.8758407361556144 1.0895689739269379 1.2033914213690131 1.0981123130269133 1.0 19.639884348504737 -6.498798301260078 1.4328648410788576 1.128855388193198 0.686203467088753 0.851722054587991 0.07750634807888584 0.15225515528586134 0.63357478781948 0.04231405766362148 0.03148400815212783 3.171039842424482e-07 6.498798301260078 -0.44265192110444496 LRLSPS(ph)PT(ph)SQR ddPTM_KYSE-520_SHP099_60min_R1 3 LRLSPSPTSQR 11 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 LRLS(0.146)PS(0.874)PT(0.892)S(0.088)QR;LRLS(0.371)PS(0.636)PT(0.913)S(0.08)QR;LRLS(0.523)PS(0.708)PT(0.738)S(0.031)QR 118.24 0.00040916 33938600000.0 30384290.0 35961900.0 30975440.0 26001640.0 29731590.0 30906620.0 29104270.0 29765980.0 42571270.0 28205030.0 True False 28698812.86411952 34234236.344087586 32972166.42485637 28472828.04792187 32071296.983393412 30713720.320351403 32046413.641902644 29662728.76281197 34841400.50238471 27955155.37738131 1.0266018012312643 1.2246126298330904 1.1794663982277256 1.018517967922275 1.1472408774140637 1.0986782189449773 1.1463507610417933 1.0610825932597845 1.2463318494224898 1.0 24.736611027835643 -11.203912099953934 2.535154755519652 0.5819563024528015 1.1271352567592432 0.21262958297640566 0.07368794700561877 8046002.061627004 4186036.3047759566 20287089.482125085 0.018181962322256415 6.252992388689484e-12 11.203912099953934 0.5451789543064417 LRLSPS(ph)PTS(ph)QR ddPTM_KYSE-520_SHP099_60min_R1 3 LRLSPSPTSQR 11 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 LRLS(0.289)PS(0.711)PT(0.219)S(0.781)QR;LRLS(0.315)PS(0.686)PT(0.364)S(0.636)QR;LRLS(0.36)PS(0.65)PT(0.025)S(0.965)QR 128.15 0.00054351 160306000000.0 40804800.0 37042700.0 36608200.0 34346600.0 32149300.0 30994000.0 31570200.0 34968900.0 40252100.0 31060600.0 True False 38541276.40164785 35263113.089773774 38968023.14719095 37610890.53731818 34679267.00550525 30800554.94935944 34761623.9114603 34847601.04770258 32943333.312866572 30785427.248781115 1.2519324838401849 1.1454482279816318 1.2657944563278332 1.2217108514811112 1.126483213153337 1.0004913916073366 1.1291584044147582 1.1319511912598939 1.0700950500588196 1.0 24.875744255029293 -5.8865882759857735 3.9711713182422876 1.0771441101680346 1.2189140962317482 0.6641575222567133 0.051524990142737995 0.1480679840680352 4.321548822853776 0.016412440657444544 0.018887710517016033 1.2984096184110065e-06 5.8865882759857735 0.1417699860637136 LRLSPS(ph)PTSQR ddPTM_KYSE-520_SHP099_60min_R1 9 LRLSPSPTSQR 11 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 LRLS(0.225)PS(0.774)PT(0.001)SQR;LRLS(0.245)PS(0.755)PTSQR;LRLS(0.202)PS(0.749)PT(0.025)S(0.025)QR;LRLS(0.417)PS(0.531)PT(0.047)S(0.004)QR;LRLS(0.022)PS(0.941)PT(0.018)S(0.018)QR;LRLS(0.271)PS(0.729)PTSQR;LRLS(0.231)PS(0.713)PT(0.035)S(0.02)QR;LRLS(0.225)PS(0.775)PTSQR;LRLS(0.094)PS(0.902)PT(0.003)S(0.001)QR 245.85 2.0135e-16 266703500000.0 52104480.0 45950230.0 45114260.0 40467630.0 40575390.0 41935920.0 40337930.0 42816630.0 51150030.0 40825250.0 True False 49214140.62669418 43742711.9780986 48022397.38496816 44313661.38816342 43768442.35061133 41674182.36794032 44415681.62465899 42668109.104006596 41862473.939325586 40463570.04656387 1.2162579962682605 1.081039362759174 1.1868057447651281 1.0951495712604946 1.0816752525850868 1.0299185741639536 1.0976708573550773 1.0544820700424067 1.0345719344870439 1.0 25.270120276773486 -1.0000000000161662 0.18022674699590768 0.9963261836395777 1.8148543334906588 0.6814322667431243 0.03637789495668768 33.84640585932179 0.3812477126902133 0.08062724245722705 7.592984217269837 0.0999999999962776 1.0000000000161662 0.8185281498510811 LRLSPSPTSQR ddPTM_KYSE-520_SHP099_60min_R1 3 LRLSPSPTSQR 11 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ;; 134.18 0.00021829 716800000.0 528250.0 472091.0 417109.0 355491.0 430805.0 455429.0 391871.0 413917.0 479772.0 424974.0 False True 498946.9194597323 449411.0397369626 443996.51353799703 389276.7577577332 464706.902554851 452586.49867819046 431485.1449724062 412481.218535954 392657.49886790133 421209.0609847694 1.184558846605092 1.066954824490855 1.0541001005532775 0.9241889451466695 1.1032690072440166 1.0744937386201092 1.0243966356364977 0.9792790724197383 0.9322152233617299 1.0 18.684176946168883 -4.18691482065463 1.4632944289171927 1.0120582522140493 1.2747504482219536 0.4961558829450359 0.05371040611820239 1.2934858889008847 2.2313152040235367 0.016212313144368464 0.5201747765237423 6.502572145341008e-05 4.18691482065463 0.2626921960079043 LRLSTDT(ph)VEHSLDNK ddPTM_KYSE-520_SHP099_60min_R1 1 LRLSTDTVEHSLDNK 15 1 P42575;P42575-2 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 1 LRLS(0.405)T(0.06)DT(0.535)VEHSLDNK 154.26 7.6897e-06 441740000.0 239180.0 234960.0 225990.0 251700.0 305630.0 301810.0 411720.0 463450.0 484650.0 394350.0 True False 225912.20860649098 223672.16891784975 240557.6769967847 275621.4923236358 329681.3422031758 299926.29183926503 453340.67559997836 461842.4001200426 396649.77703227417 390856.3657996572 0.5779929108850378 0.5722618037964828 0.6154631164945342 0.7051733486794793 0.8434846430828299 0.7673568043995974 1.1598651455311055 1.1816166769476923 1.0148223535281669 1.0 18.57627900928619 -6.204396996406026 0.9797996987162513 1.1066297956991853 0.5839396930486771 0.8414126005507652 0.08808450923312965 0.19814271131391342 0.4055529015844014 0.05093291094278664 0.04917383000080607 6.246014722813013e-07 6.204396996406026 -0.5226901026505082 LRPGEER ddPTM_KYSE-520_SHP099_60min_R1 1 LRPGEER 7 1 P16144-4;P16144-2;P16144-3;P16144;P16144-5 P16144-4 ITGB4 Integrin beta-4 0 82.45200000000001 0.013088999999999998 251320000.0 91356.0 124550.0 72338.0 83809.0 136110.0 112070.0 93190.0 120650.0 121100.0 89021.0 False True 86288.30056632905 118566.43104663846 77001.02322489231 91774.18216190534 146821.08264003636 111370.52955974432 102610.5546467549 120231.49330992169 99111.2926825718 88232.3431972901 0.9779667799752965 1.343797826852682 0.8727074498374794 1.040142184104706 1.6640279212775764 1.2622415491189727 1.1629585130399938 1.3626691636317598 1.12329888441199 1.0 16.42901997883562 -4.238086125626348 22.860742468500103 1.2143836540764332 0.9779659180326016 0.09093581446138876 0.21147364715752026 4966.127848183158 4861152.131675214 0.053852665503876636 2.503539662971787 5.779814156300073e-05 4.238086125626348 -0.23641773604383165 LRPHVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 LRPHVSPR 8 1 Q01201;D6R992 Q01201 RELB Transcription factor RelB 1 LRPHVS(1)PR 97.456 0.002065 346510000.0 348100.0 343400.0 335340.0 339190.0 340350.0 336720.0 318850.0 290020.0 380560.0 346540.0 True False 328790.1990798541 326902.54854609125 356956.55296297115 371426.5156188077 367133.6086733995 334618.4055800577 351082.4696761221 289013.9883111768 311459.89713690756 343469.9252040405 0.9572605196351157 0.951764694832867 1.0392658185455943 1.0813945803207061 1.06889594032229 0.9742291275758002 1.022163642035207 0.8414535512519363 0.906803985681957 1.0 18.38982425424139 -7.2408558462895245 24.46960724289384 0.9055965767056687 1.0154028221122937 0.3953061947195917 0.05475854671322312 557.9624567458615 663304.2293106037 0.027092086622986893 0.01561749150079815 5.7430705812442016e-08 7.2408558462895245 0.10980624540662498 LRPKS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 2 LRPKSPPPK 9 2 Q9HCE5 Q9HCE5 METTL14 N6-adenosine-methyltransferase subunit METTL14 1 LRPKS(1)PPPK;LRPKS(1)PPPK 87.001 0.0035125 25582000000.0 22571200.0 20080800.0 19517700.0 18073100.0 18045500.0 17692700.0 16364000.0 17166100.0 22320600.0 16047800.0 True False 21319130.541428298 19116088.226104677 20775842.17142416 19790761.990124326 19465578.185150065 17582273.29652616 18018232.817249663 17106554.805697866 18267741.69653683 15905628.976999458 1.3403513040733632 1.2018442184051787 1.3061943165823457 1.2442615138793327 1.2238169401096 1.1054120099212195 1.1328211442191418 1.0755031964114732 1.1485079730548937 1.0 23.923034087585727 -6.13501118220245 0.2924393304511713 0.9990168916019664 1.3757460105540997 0.8012723896850789 0.044627753376778594 1.2005555956585823 0.20386211647483068 0.06434454948763288 0.1573843589829114 7.328056646357681e-07 6.13501118220245 0.37672911895213335 LRPLS(ph)YPQTVGETYGK ddPTM_KYSE-520_SHP099_60min_R1 3 LRPLSYPQTVGETYGK 16 1 P63000-2 P63000-2 RAC1 Ras-related C3 botulinum toxin substrate 1 1 LRPLS(0.998)YPQT(0.002)VGETYGK;LRPLS(1)YPQTVGETYGK;LRPLS(1)YPQTVGETYGK 243.06 2.3649e-23 1555420000.0 1032301.0 1358408.0 1160999.0 1631824.0 1495388.0 1821913.0 1568762.0 2302770.0 2674450.0 1740670.0 True False 975037.2056889752 1293148.0406680214 1235838.8532040794 1786912.062334226 1613066.5280061597 1810541.7651626854 1727347.7726017025 2294782.2283405573 2188837.2973980512 1725249.018020768 0.5651573746771656 0.7495428353592345 0.7163249132706957 1.0357415327696862 0.9349760591990913 1.0494379340321356 1.0012164937113497 1.3301165248441449 1.2687080383961724 1.0 20.71837318114848 -5.095899012019534 0.5266968991897679 1.1920433668027646 0.44379988166193624 0.7564893500901779 0.11135943541860588 0.9565702763263102 0.37073639549495674 0.07825501780792983 0.401824146038961 8.018645020039733e-06 5.095899012019534 -0.7482434851408284 LRPLWK ddPTM_KYSE-520_SHP099_60min_R1 1 LRPLWK 6 1 P56559;P40617;P56559-2;P36406-3;P36406-2;P36406 REV__E5RG38 ARL4C;ARL4A;TRIM23 ADP-ribosylation factor-like protein 4C;ADP-ribosylation factor-like protein 4A;E3 ubiquitin-protein ligase TRIM23 0 91.09299999999999 0.016555 271420000.0 234240.0 242010.0 180030.0 147900.0 188220.0 229200.0 162050.0 178780.0 199730.0 180190.0 False True 221246.24025413662 230383.47633558395 191635.02185818474 161956.37153224365 203031.84317469405 227769.47778257707 178431.59545559212 178159.85390756573 163464.06678356757 178593.6567856985 1.2388247389974136 1.2899868924909808 1.073022554704365 0.9068427986027602 1.1368368106058766 1.275350322525097 0.9990925695065372 0.9975710062387417 0.9152848411616012 1.0 17.446321314770916 -1.000000000000001 0.2977924162542076 0.9931016661646174 3.397673829969956 0.3645664687017359 0.10915534443569687 65.90500970046968 0.938974097267168 0.12376365847159407 84.2133530265517 0.09999999999999974 1.000000000000001 2.4045721638053386 LRPS(ph)LDFDK ddPTM_KYSE-520_SHP099_60min_R1 6 LRPSLDFDK 9 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 LRPS(1)LDFDK;LRPS(1)LDFDK;LRPS(1)LDFDK;LRPS(1)LDFDK;LRPS(1)LDFDK;LRPS(1)LDFDK 108.32 0.0018009 2975260000.0 5277080.0 4561830.0 4393190.0 4378490.0 4764860.0 4817580.0 4316670.0 4628030.0 5503320.0 4854280.0 True False 4984349.852801825 4342672.8393535735 4676382.056752533 4794620.373158985 5139827.373655155 4787511.696229435 4753041.130239377 4611976.444120319 4504055.81540752 4811274.855772687 1.0359727935354759 0.9026033576408812 0.9719631899935406 0.9965384470617554 1.0682880375225836 0.995060943251924 0.987896404325469 0.9585767977039921 0.936146021673121 1.0 22.197987788560052 -5.145107053938549 5.234335584853559 0.9931013989113472 0.962251728800882 0.042059808786439556 0.04382108322680271 0.6259762866832823 24.42604736734599 0.012423846924484923 0.02206318423958851 7.159669020427826e-06 5.145107053938549 -0.030849670110465244 LRPSTSVDEEDEES(ph)ERER ddPTM_KYSE-520_SHP099_60min_R1 2 LRPSTSVDEEDEESERER 18 2 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 LRPSTSVDEEDEES(1)ERER;LRPSTSVDEEDEES(1)ERER 199.89 5.8678e-13 928040000.0 234000.0 211051.0 208886.0 163158.0 204768.0 191198.0 163804.0 164570.0 210682.0 164081.0 True False 221019.5535325648 200911.79316599068 222351.12578941678 178664.48726475867 220882.0766294539 190004.66236070296 180362.9068929826 163999.14508092694 172427.4596610205 162627.36999308635 1.3590550812077995 1.2354119308117193 1.3672429542386957 1.0986126583265419 1.3582097320939523 1.1683436949683221 1.1090562855480615 1.0084350813021137 1.0602610106057224 1.0 17.311210556144577 -6.7363641318067895 1.6343229154027084 1.0233615142019061 1.277799368403778 0.6813516276984555 0.07776638007632525 0.21772932456343755 1.188056717639339 0.04060923741912851 0.025257511838214456 1.8349991532829274e-07 6.7363641318067895 0.2544378542018719 LRPVS(ph)PEEIR ddPTM_KYSE-520_SHP099_60min_R1 2 LRPVSPEEIR 10 1 Q08AE8-5;Q08AE8-2;Q08AE8;J3KNG6;Q08AE8-4;Q08AE8-3;K7EMJ7 Q08AE8-5 SPIRE1 Protein spire homolog 1 1 LRPVS(1)PEEIR;LRPVS(1)PEEIR 124.51 0.00029546 1252220000.0 765080.0 636750.0 587280.0 694740.0 664800.0 650040.0 581500.0 677180.0 668810.0 682120.0 True False 722639.4872508313 606159.5742187643 625137.0084812235 760767.8807188025 717115.9778054236 645982.8592399044 640283.6948930998 674831.0206349996 547370.9633280825 676076.9474813291 1.0688716572025823 0.896583704675871 0.9246536371490283 1.1252681866361258 1.060701715207096 0.9554871847745471 0.9470574278244892 0.9981571227195793 0.8096282018892517 1.0 19.366827930163353 -6.4544703706638655 7.886129482138699 0.9402926366677885 1.0097443577636969 0.17464809602882914 0.07969841057102381 0.6562219745472325 69.00904291094304 0.02940133813913913 0.02581281574756638 3.51179882619108e-07 6.4544703706638655 0.06945172109590836 LRPVS(ph)PEEIRR ddPTM_KYSE-520_SHP099_60min_R1 1 LRPVSPEEIRR 11 2 Q08AE8-5;Q08AE8-2;Q08AE8;J3KNG6;Q08AE8-4;Q08AE8-3;K7EMJ7 Q08AE8-5 SPIRE1 Protein spire homolog 1 1 LRPVS(1)PEEIRR 133.48 7.746e-05 461500000.0 233790.0 221310.0 228750.0 193080.0 223950.0 206060.0 175080.0 207350.0 242810.0 202720.0 True False 220821.2026511895 210677.93540691762 243495.591012941 211430.2651483811 241573.5908988035 204773.9031059242 192778.79501613765 206630.75124585393 198721.8247419922 200924.05851377334 1.0990281815159144 1.0485450919381845 1.2118787208165487 1.052289440658932 1.2023129170578826 1.0191606949442888 0.9594609846233156 1.0284022370157797 0.9890394719872225 1.0 17.616290796200435 -6.43598458034416 7.412790119485442 0.9955557414066788 1.119442379697465 0.5812093992345089 0.05274630330638824 0.19771043721550635 14.829157529972994 0.01774615285678692 0.015590681799426527 3.6645058527042353e-07 6.43598458034416 0.12388663829078628 LRPVS(ph)SRPQETVQAQSSR ddPTM_KYSE-520_SHP099_60min_R1 2 LRPVSSRPQETVQAQSSR 18 2 Q8N3J3-2;Q8N3J3-3;Q8N3J3-4;Q8N3J3 Q8N3J3-2 C17orf53 Uncharacterized protein C17orf53 1 LRPVS(0.499)S(0.499)RPQET(0.001)VQAQSSR;LRPVS(0.853)S(0.147)RPQETVQAQSSR 68.369 0.018272999999999998 0.0 113195.0 88943.0 128528.0 108187.0 88895.0 102676.0 97013.0 123749.0 122139.0 116307.0 True False 106915.84770136196 84670.04477383514 136813.12053207116 118469.05995239239 95890.5307566383 102035.16099827168 106820.02079563936 123319.7436022336 99961.6364736304 115276.61046547687 0.9274721669005109 0.7344945729402079 1.1868246297287173 1.0276938181477118 0.8318298948020828 0.8851332511102002 0.926640888939304 1.0697724638526347 0.8671458682727923 1.0 16.814740295418293 -1.0001825259625232 0.008742190462743469 1.79530381584508 1.5146486836909545e-05 0.01793922906485179 0.12190191960522027 99598.60678330668 67.52384641371192 6088.830749351908 7885.284896507874 0.0999579806745533 1.0001825259625232 -1.795288669358243 LRQLLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 LRQLLSPK 8 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 LRQLLS(1)PK 113.67 0.00068166 521100000.0 342710.0 412550.0 434790.0 233070.0 280910.0 259340.0 179570.0 171890.0 504170.0 271950.0 True False 323699.1931245524 392730.4787498253 462817.25908859645 255220.90272494956 303016.01884073584 257721.36286271169 197722.68803431466 171293.75370942772 412625.43709143 269540.73457389825 1.200928659767401 1.4570357217830945 1.7170586843589268 0.9468732179884197 1.1241937858474593 0.9561499610443996 0.73355401493167 0.635502288662292 1.5308463032265838 1.0 18.0401437924123 -5.280490477628612 24.14044851163575 0.9679482292699038 1.4582104808565612 0.4166201265342627 0.25328567232682014 468.99096571947865 594277.1779660626 0.07173860698651444 0.1066271392772506 5.24215094859534e-06 5.280490477628612 0.4902622515866575 LRQPFFQK ddPTM_KYSE-520_SHP099_60min_R1 4 LRQPFFQK 8 1 Q01105;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105-2 Q01105;Q01105-2 SET;SETSIP Protein SET;Protein SETSIP 0 ;;; 174.27 0.00010131 3460880000.0 2958170.0 2480130.0 2118290.0 1951580.0 2427150.0 2459830.0 1868350.0 2114580.0 2066650.0 1668280.0 False True 2794074.4131343053 2360980.832048977 2254838.362783836 2137057.576436076 2618152.8964055823 2444477.28854239 2057221.05133882 2107245.0155266845 1691398.4560069102 1653500.3371022008 1.6897936761422063 1.4278683705542223 1.3636757805175261 1.2924445967645346 1.5834002797930833 1.4783651588643734 1.2441612530567423 1.2744146271053576 1.0229199341870874 1.0 20.657091908978163 -7.416242242183065 1.1140739320951663 0.9908036916597359 1.4631410993558636 0.7046864865257043 0.1141017643973071 0.2941448929575816 0.6484851952909116 0.1067019107866868 0.03901767583313568 3.8349327970063606e-08 7.416242242183065 0.47233740769612764 LRQYAEK ddPTM_KYSE-520_SHP099_60min_R1 1 LRQYAEK 7 1 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;A0A087X1X7;E9PK01;E9PQZ1;E9PI39;E9PQ49;E9PL71;H0YE72;H0YE58 P29692-2 EEF1D Elongation factor 1-delta 0 95.815 0.0067586 565390000.0 949090.0 1391200.0 586600.0 805380.0 1512100.0 1195700.0 815880.0 644560.0 1045900.0 777480.0 False True 896442.0857359903 1324364.6637662274 624413.1745931844 881923.0730536737 1631093.667327889 1188237.1927776046 898357.1126214649 642324.1718014344 855990.9249934088 770592.1320702878 1.1633159078948698 1.7186324757925617 0.8103030755266392 1.1444745363338735 2.11667573473111 1.5419793991216384 1.1658010447211824 0.8335462368085095 1.11082230062963 1.0 19.55560793024854 -6.967780139048978 5.018718958166319 0.9806585906724132 1.4196394495100098 0.25272401458219174 0.3380499497180641 0.28061699095020787 17.78824761576748 0.15833494725358835 0.1020305418971382 1.0770103105472092e-07 6.967780139048978 0.4389808588375965 LRRES(ph)PESEGPIYEGLIL ddPTM_KYSE-520_SHP099_60min_R1 5 LRRESPESEGPIYEGLIL 18 2 Q96QK1 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 1 LRRES(0.99)PES(0.01)EGPIYEGLIL;LRRES(0.999)PES(0.001)EGPIYEGLIL;LRRES(0.999)PES(0.001)EGPIYEGLIL;LRRES(1)PESEGPIYEGLIL;LRRES(0.998)PES(0.002)EGPIYEGLIL 161.47 2.1608e-08 1150250000.0 1162180.0 1195930.0 1178520.0 1020490.0 1020540.0 1093120.0 983370.0 993640.0 1328370.0 1025090.0 True False 1097711.5586516073 1138475.7276724726 1254489.2848986713 1117477.0627784943 1100850.6919216998 1086297.4326077239 1082778.6363663417 990193.2947573207 1087171.4934826412 1016008.5001079513 1.0804157234265017 1.1205376013601354 1.2347232181279795 1.099869797014259 1.0835053956780223 1.0691814413878469 1.0657180882357737 0.9745915458897364 1.070041730327186 1.0 19.95448104132824 -6.291358950892405 1.0534386526396404 1.0196867086320944 1.1412319978311662 0.5269858622251711 0.04557975676043291 0.41298708167044346 0.9591307035777925 0.026234301768342533 0.023072011241161185 5.11259097565025e-07 6.291358950892405 0.12154528919907182 LRRPLS(ph)PETR ddPTM_KYSE-520_SHP099_60min_R1 3 LRRPLSPETR 10 2 Q9P227 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 LRRPLS(0.998)PET(0.002)R;LRRPLS(1)PETR;LRRPLS(0.994)PET(0.006)R 78.486 0.009718700000000002 6974000000.0 4886200.0 4582000.0 3863620.0 3698260.0 3912300.0 3970220.0 3402640.0 3438210.0 4730600.0 3667120.0 True False 4615152.745601787 4361873.842277783 4112675.1272105738 4049741.5184775842 4220175.752057999 3945440.3843016694 3746612.057766218 3426283.6519942502 3871642.2887215028 3634632.169776188 1.2697716109979782 1.2000867318979287 1.131524439091679 1.1142094521017123 1.1611011939945128 1.085512976281344 1.0308091390708527 0.9426768630084602 1.0652088321113136 1.0 21.793377937955697 -4.498544597360133 0.3112136335683759 0.9776966816881039 1.4397719768891577 0.8022042274524657 0.040937313830910815 2.900463712391875 0.25636266712428885 0.04897673834645273 0.5049798826757776 3.172892825227705e-05 4.498544597360133 0.46207529520105384 LRRPS(ph)PPEPWDEEDGASCSTFFGSEER ddPTM_KYSE-520_SHP099_60min_R1 4 LRRPSPPEPWDEEDGASCSTFFGSEER 27 2 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 LRRPS(0.94)PPEPWDEEDGAS(0.056)CS(0.004)T(0.001)FFGSEER;LRRPS(1)PPEPWDEEDGASCSTFFGSEER;LRRPS(1)PPEPWDEEDGASCSTFFGSEER;LRRPS(1)PPEPWDEEDGASCSTFFGSEER 292.69 2.9402999999999998e-52 3770870000.0 510637.0 622810.0 588364.0 407651.0 503346.0 457137.0 405610.0 420571.0 751180.0 466781.0 True False 482310.9476803767 592889.272743131 626290.8848556841 446394.0284752578 542956.4665530208 454283.83841663983 446613.0171721243 419112.1373630095 614784.6477068065 462645.68349012267 1.0425061010877752 1.281519084476207 1.3537160449245935 0.9648723513591112 1.1735902569263088 0.9819260281206939 0.9653456913354285 0.9059030535015408 1.3288455283295255 1.0 18.819548204938727 -5.270002657645874 24.978651341876144 1.041175572766843 1.2314742802207208 0.2647909636208714 0.1373029940758674 778.3669026151476 2270455.0975108705 0.037995180576944385 0.05740152315555217 5.370285100379825e-06 5.270002657645874 0.19029870745387778 LRRPS(ph)VNGEPGSVPPPR ddPTM_KYSE-520_SHP099_60min_R1 4 LRRPSVNGEPGSVPPPR 17 2 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 LRRPS(1)VNGEPGSVPPPR;LRRPS(1)VNGEPGSVPPPR;LRRPS(1)VNGEPGSVPPPR;LRRPS(1)VNGEPGSVPPPR 147.02 5.6747e-06 13155000000.0 2776430.0 2408090.0 2441030.0 2157100.0 1910470.0 2044360.0 1999280.0 2199090.0 2954360.0 2346860.0 True False 2622415.893224011 2292401.7417832213 2598382.699586091 2362110.1354442346 2060813.1199126474 2031600.3909231604 2201386.7334924797 2191461.8700614623 2417922.6973549337 2326068.6462294543 1.1274026230803353 0.9855262635946678 1.1170705145774853 1.0154945939678965 0.8859640162611775 0.8734051740976667 0.9463980080987363 0.9421312107937189 1.0394889683390791 1.0 21.149462243140224 -5.5471118973489215 6.542519450721259 0.9415962021524005 1.0675941965031412 0.4974940671243816 0.057914743238349276 0.1377932709679682 21.1228411036276 0.01717234974498394 0.022679691240798775 2.837187923804322e-06 5.5471118973489215 0.12599799435074077 LRS(ph)AGAAQK ddPTM_KYSE-520_SHP099_60min_R1 1 LRSAGAAQK 9 1 Q6PL18;E5RHW7;E5RIP2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 LRS(1)AGAAQK 135.02 0.00032265 246350000.0 296220.0 286700.0 249860.0 236140.0 300610.0 308450.0 288120.0 361400.0 394040.0 342410.0 True False 279788.08610007 272926.50165452645 265966.3753901352 258582.67460192007 324266.2967630686 306524.8491362822 317245.98138022335 360146.3877513937 322492.26894005446 339376.5137909487 0.8244179391636264 0.8041997326386747 0.7836911647750818 0.7619345007509961 0.9554765388473881 0.9031999466088491 0.9347906189396551 1.0612000922763882 0.9502492241955944 1.0 18.372527202517933 -6.14255598408817 1.0984604887343001 0.9947122841293704 0.7914024943278113 0.7563361964466173 0.04689301922196626 0.2379625937868631 0.603578768965109 0.023977134229711212 0.024247775754834 7.201849075668867e-07 6.14255598408817 -0.20330978980155912 LRS(ph)PFLQK ddPTM_KYSE-520_SHP099_60min_R1 4 LRSPFLQK 8 1 Q9UJU6;H0Y5J4;Q9UJU6-5;B4DDD6;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;Q9UJU6-4 Q9UJU6;B4DDD6 DBNL Drebrin-like protein 1 LRS(1)PFLQK;LRS(1)PFLQK;LRS(1)PFLQK;LRS(1)PFLQK 108.3 0.00085508 14378200000.0 8516100.0 7671620.0 7465110.0 6973070.0 7478660.0 7699280.0 7766470.0 8959300.0 10296100.0 8428800.0 True False 8043694.956575543 7303063.859863619 7946322.935198308 7635788.476270067 8067187.994245341 7651225.937617088 8551580.581042852 8928222.279416334 8426587.783559259 8354127.389507174 0.9628408308303348 0.874186317656145 0.9511852722259095 0.9140138904107036 0.9656529782365745 0.9158617747710032 1.0236354058694006 1.0687199109065808 1.0086736041568023 1.0 22.994057712203503 -6.785768104274959 8.315463015839708 1.0313125815435107 0.9298141959304693 0.6961297685388474 0.030525509787113943 0.107726080353544 30.567624095664407 0.011989577258926947 0.008239570413387395 1.6376907487679807e-07 6.785768104274959 -0.10149838561304136 LRS(ph)PLPWQHR ddPTM_KYSE-520_SHP099_60min_R1 1 LRSPLPWQHR 10 1 P98160 P98160 HSPG2 Basement membrane-specific heparan sulfate proteoglycan core protein;Endorepellin;LG3 peptide 1 LRS(1)PLPWQHR 71.176 0.014213 2441800000.0 1174900.0 1191400.0 1158300.0 807680.0 1190900.0 1039300.0 1112500.0 1152200.0 1397600.0 1018500.0 True False 1109725.9548949169 1134163.3556721404 1232965.8713455268 884441.6643621543 1284617.054705894 1032813.343191239 1224962.3569536947 1148203.287125502 1143831.0706289213 1009476.8823810099 1.099307942820299 1.1235159273752142 1.2213908935065287 0.87613860188265 1.2725571799880377 1.0231173801178948 1.2134625154212828 1.1374240531564073 1.133092882653257 1.0 19.94517644180024 LRS(ph)PPEALVQGR ddPTM_KYSE-520_SHP099_60min_R1 7 LRSPPEALVQGR 12 1 Q9UHB6;Q9UHB6-4;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 LRS(1)PPEALVQGR;LRS(1)PPEALVQGR;LRS(1)PPEALVQGR;LRS(1)PPEALVQGR;LRS(1)PPEALVQGR;LRS(1)PPEALVQGR;LRS(1)PPEALVQGR 137.17 2.6915e-05 12066640000.0 2711770.0 2453170.0 2413100.0 2243240.0 2382320.0 2415400.0 2273300.0 2448590.0 2785370.0 2442670.0 True False 2561342.7123205294 2335316.0309167597 2568652.287096514 2456436.8551453 2569795.030453395 2400324.5926528648 2503107.349269961 2440096.412795204 2279617.021463705 2421029.8441685033 1.057955860597917 0.9645961352115501 1.060975061205291 1.014624772619834 1.0614470683387982 0.9914477504003055 1.033901897285222 1.0078753959488052 0.9415898060714052 1.0 21.207189432952028 -7.571857255307033 6.867993185963649 0.9712360210180996 1.0246667850141327 0.3170443368741447 0.03222945468763555 0.23750897536383223 25.575777599972213 0.020386077599475142 0.007603805853981551 2.6800490634256904e-08 7.571857255307033 0.05343076399603308 LRS(ph)PRGSPDGS(ph)LQTGKPSAPK ddPTM_KYSE-520_SHP099_60min_R1 1 LRSPRGSPDGSLQTGKPSAPK 21 3 E7EV54;C9JFV4;Q8IZL8 E7EV54 PELP1 Proline-, glutamic acid- and leucine-rich protein 1 2 LRS(1)PRGS(0.099)PDGS(0.445)LQT(0.389)GKPS(0.067)APK 89.181 0.0051387 2005900000.0 962440.0 1026300.0 945920.0 545630.0 722660.0 735990.0 615110.0 551270.0 838420.0 598310.0 True False 909051.5346234249 976995.0074922927 1006895.516725513 597486.5111503594 779529.2306270562 731396.4134083723 677291.321695089 549357.7730373853 686184.0628482394 593009.4388781359 1.5329461472707453 1.6475201631538723 1.6979418044852255 1.007549748753904 1.3145308987016822 1.2333638648181369 1.142125702040087 0.9263895935226066 1.157121654161817 1.0 19.17769554263862 -5.2582572523059525 24.990374477126533 1.1233189301734727 1.6282744770772573 0.8080199298656806 0.11483506674843467 120.610035377708 947188.8436570038 0.03308616596650064 0.05435559121945746 5.517505156260665e-06 5.2582572523059525 0.5049555469037845 LRS(ph)PS(ph)NDSAHR ddPTM_KYSE-520_SHP099_60min_R1 1 LRSPSNDSAHR 11 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 LRS(1)PS(0.999)NDS(0.001)AHR 48.423 0.05782999999999999 568930000.0 335370.0 391200.0 380810.0 379410.0 339150.0 333760.0 280830.0 331500.0 425750.0 329230.0 True False 316766.3575564799 372406.16479682823 405357.6219175435 415469.01232622424 365839.1755004655 331676.8800380145 309219.0370366795 330350.1038726812 348444.53228410345 326313.27833706385 0.9707430821410753 1.141253480994276 1.2422345299072726 1.2732212873576887 1.1211286815076325 1.0164369704116372 0.9476140186893439 1.0123710121641067 1.0678221065959175 1.0 18.315898169195023 -6.195596158189689 3.8622057102066973 1.0049169193832868 1.164792129490583 0.4390701557592498 0.07986737575553939 0.22779446885930027 6.755020885030166 0.02966518273286031 0.029121289008678906 6.373879398077723e-07 6.195596158189689 0.15987521010729622 LRS(ph)PSNDSAHR ddPTM_KYSE-520_SHP099_60min_R1 7 LRSPSNDSAHR 11 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LRS(0.999)PS(0.001)NDSAHR;LRS(0.998)PS(0.002)NDSAHR;LRS(0.996)PS(0.004)NDSAHR;LRS(0.996)PS(0.004)NDSAHR;LRS(1)PSNDSAHR;LRS(1)PSNDSAHR;LRS(0.995)PS(0.005)NDSAHR 99.48100000000001 0.0016713000000000001 2654720000.0 1031495.0 1082674.0 1136797.0 1356989.0 954184.0 934510.0 811600.0 799456.0 1054614.0 892084.0 True False 974275.9161156974 1030660.715913195 1210076.7535595119 1485956.8265663795 1029272.8522356941 928677.3764511166 893644.4484526906 796682.8737304322 863122.6822554714 884180.8297908499 1.101896674627247 1.1656673399682218 1.3685851499921702 1.6806028546421639 1.1640976795201103 1.0503251655781682 1.0107032615308786 0.9010406546802027 0.9761834380187141 1.0 19.753981929532355 -6.166946528980466 3.2123866297855717 0.9786159971127061 1.3273250248549249 0.5319757973670989 0.14917240144971383 0.22095666319368748 4.372212754278771 0.05738587718023662 0.05679280199522713 6.808531812477609e-07 6.166946528980466 0.3487090277422188 LRS(ph)PSVLEVR ddPTM_KYSE-520_SHP099_60min_R1 1 LRSPSVLEVR 10 1 H0YI02;J3KPG1;Q96QF0-5;Q96QF0-7;Q96QF0-6;Q96QF0-3;Q96QF0-4;Q96QF0-2;Q96QF0;H0YI66;F8VNX9 H0YI02 RAB3IP Rab-3A-interacting protein 1 LRS(0.995)PS(0.005)VLEVR 143.86 6.221199999999999e-05 0.0 116940.0 108250.0 97725.0 90613.0 94062.0 82812.0 93886.0 101560.0 112830.0 100830.0 True False 110453.10508588931 103049.50751343735 104024.5098655285 99224.83227620804 101464.14426042984 82295.1395904484 103376.91311906025 101207.71206428228 92342.91621283698 99936.72464455306 1.1052303893162405 1.0311475374038481 1.0409037341929561 0.9928765689402267 1.0152838670799886 0.8234724510248775 1.0344236664423712 1.0127179215073314 0.9240138351669506 1.0 16.608727315088785 -4.813192821956722 0.9308747301957558 0.9656457648894731 1.1086171045065718 0.35234686119640235 0.05816868180932349 1.2256385170653143 1.46090986317984 0.022006759423123995 0.1501845379713226 1.537471868201976e-05 4.813192821956722 0.14297133961709874 LRS(ph)SLVFKPTLPEQK ddPTM_KYSE-520_SHP099_60min_R1 1 LRSSLVFKPTLPEQK 15 2 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 LRS(0.5)S(0.5)LVFKPTLPEQK 89.859 0.0017686 4124500000.0 3232400.0 3313600.0 4069000.0 3565600.0 3174600.0 3045300.0 3028600.0 3652700.0 3741300.0 3292500.0 True False 3053092.32837035 3154409.6821850003 4331294.250630191 3904473.5519632706 3424422.9589968384 3026293.1531033213 3334760.4442876065 3640029.636246589 3061974.230497982 3263331.011526237 0.9355754342990907 0.9666226536760992 1.3272616952837017 1.1964687425739187 1.0493642682589102 0.9273632194877912 1.0218885036513543 1.115433777140546 0.9382971631388133 1.0 21.637913901978227 -5.992678421040633 24.448371092494146 1.006833203938048 1.1135939550917249 0.1598342626149366 0.11353122800767412 279.57481631149085 933550.882428253 0.03826438458379973 0.043293387580054125 1.0170014660091947e-06 5.992678421040633 0.10676075115367678 LRS(ph)YEDMIGEEVPSDQYYWAPLAQHER ddPTM_KYSE-520_SHP099_60min_R1 9 LRSYEDMIGEEVPSDQYYWAPLAQHER 27 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12 O60716-5 CTNND1 Catenin delta-1 1 LRS(0.826)Y(0.174)EDMIGEEVPSDQYYWAPLAQHER;LRS(0.864)Y(0.136)EDMIGEEVPSDQYYWAPLAQHER;LRS(0.985)Y(0.015)EDMIGEEVPSDQYYWAPLAQHER;LRS(0.997)Y(0.003)EDMIGEEVPSDQYYWAPLAQHER;LRS(1)YEDMIGEEVPSDQYYWAPLAQHER;LRS(0.998)Y(0.002)EDMIGEEVPSDQYYWAPLAQHER;LRS(1)YEDMIGEEVPSDQYYWAPLAQHER;LRS(0.518)Y(0.476)EDMIGEEVPS(0.006)DQYYWAPLAQHER;LRS(0.542)Y(0.458)EDMIGEEVPSDQYYWAPLAQHER 250.66 1.5856e-31 7460654000.0 1189890.0 1173276.0 805696.0 926326.0 1093781.0 1320406.0 1477811.0 1744201.0 2425528.0 1606791.0 True False 1123884.429713093 1116910.05983682 857632.45331918 1014363.744529933 1179855.3419374146 1312164.856374262 1627202.557925482 1738150.7738305756 1985113.2577850765 1592556.0818044827 0.7057110531640742 0.7013316972619759 0.538525746827967 0.6369406742527928 0.7408563851645036 0.8239363570088426 1.0217552628236126 1.091422018784496 1.246495040561333 1.0 20.602912747153688 -6.639378350685352 1.384258161890981 1.1332432519409883 0.6459624035316174 0.8852716064486746 0.07307251605454002 0.12937867495437488 0.5053378959345244 0.04186340301928742 0.027386144133369487 2.2941491497531656e-07 6.639378350685352 -0.4872808484093709 LRSDAGLES(ph)DTAMK ddPTM_KYSE-520_SHP099_60min_R1 2 LRSDAGLESDTAMK 14 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 LRSDAGLES(0.745)DT(0.255)AMK;LRSDAGLES(0.795)DT(0.205)AMK 150.85 1.6605e-06 953220000.0 1070680.0 1141690.0 1021490.0 846710.0 907470.0 975630.0 817070.0 971410.0 1268350.0 999810.0 True False 1011287.2460523364 1086841.4986883732 1087336.879841788 927181.0638273568 978882.7262019974 969540.7312784259 899667.4094347457 968040.4054387977 1038049.6125015669 990952.4612404102 1.020520444327342 1.0967645181767198 1.0972644222314458 0.935646360539608 0.9878200665415324 0.9783927778582007 0.9078815025178909 0.9768787538274715 1.0475271550385006 1.0 19.918456323394725 -5.256524565350627 24.998130702867243 0.9730588723806707 1.0740412713083454 0.5405656081634358 0.040125070765867105 304.9060407015667 1550834.968032384 0.011166783188435381 0.018609637332107694 5.539562091785435e-06 5.256524565350627 0.10098239892767469 LRSS(ph)LVFKPTLPEQK ddPTM_KYSE-520_SHP099_60min_R1 1 LRSSLVFKPTLPEQK 15 2 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 LRS(0.015)S(0.985)LVFKPTLPEQK 230.99 1.7923e-15 1948600000.0 1532800.0 1904000.0 1737200.0 1781900.0 1712800.0 1543300.0 1539200.0 1726300.0 2037700.0 1659800.0 True False 1447772.5284389528 1812528.9820377338 1849182.6916182782 1951251.240252232 1847587.6155010972 1533667.6922419316 1694797.3571443849 1720311.868221448 1667705.0462368012 1645095.4633048596 0.880053808871674 1.1017773876760406 1.1240579850019308 1.186102134360234 1.1230883901347875 0.9322666838804121 1.030212163943166 1.0457216049732974 1.0137436297383744 1.0 20.649739873917166 -6.239903264391027 24.806642896872404 1.0088603646316743 1.092065369235147 0.1901498111322858 0.07978451927102471 1279.0495107268885 1473289.1760217238 0.02743862170813348 0.02741722707294604 5.755681262390908e-07 6.239903264391027 0.08320500460347269 LRT(ph)STSDLSR ddPTM_KYSE-520_SHP099_60min_R1 1 LRTSTSDLSR 10 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 LRT(0.727)S(0.265)T(0.007)SDLSR 88.075 0.010814 2022000000.0 1412900.0 1124200.0 955980.0 990420.0 1226500.0 993610.0 946110.0 1193000.0 1203000.0 1076200.0 True False 1334523.6204536776 1070191.744541399 1017604.0004220824 1084549.2190193676 1323018.5721696012 987408.5114290839 1041752.0319437853 1188861.7614482928 984565.5251621295 1066665.705270929 1.251117021817734 1.0033056647954894 0.9540046102481703 1.0167658092503276 1.2403310293299057 0.9256963138027259 0.9766434102043097 1.1145589059191947 0.9230310117751969 1.0 20.02467667340176 LRTACER ddPTM_KYSE-520_SHP099_60min_R1 1 LRTACER 7 1 E9PKE3;P11142;E9PNE6;A8K7Q2;P11142-2;E9PN89;P54652;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37;P17066;P48741 E9PKE3;A0A0G2JIW1;P17066 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 86.095 0.009194299999999999 121330000.0 110190.0 151620.0 126770.0 51549.0 85350.0 82605.0 46130.0 58764.0 96553.0 71157.0 False True 104077.54104168079 144335.94761374002 134941.7970391715 56448.20146122803 92066.5594249291 82089.43155423107 50793.2705854148 58560.1613996207 79021.40910305825 70526.60433930822 1.4757202904730358 2.0465461078961082 1.913346010392865 0.8003816714278764 1.3054160240296089 1.1639498643560564 0.7202001437790053 0.8303272495281899 1.1204482314628528 1.0 16.105879959162674 -5.256662218293119 24.99830764748671 0.9934192778721785 1.835338387951046 0.7537556239292091 0.21474001080950098 193.51686143961993 1012647.0585998126 0.060502071536325974 0.10058740689877968 5.537806563634311e-06 5.256662218293119 0.8419191100788675 LRTS(ph)TSDLSR ddPTM_KYSE-520_SHP099_60min_R1 7 LRTSTSDLSR 10 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 LRT(0.064)S(0.925)T(0.01)SDLSR;LRT(0.061)S(0.344)T(0.344)S(0.243)DLS(0.009)R;LRT(0.266)S(0.676)T(0.045)S(0.012)DLSR;LRT(0.147)S(0.413)T(0.147)S(0.147)DLS(0.145)R;LRT(0.213)S(0.54)T(0.213)S(0.033)DLS(0.001)R;LRT(0.007)S(0.963)T(0.025)S(0.004)DLSR;LRT(0.304)S(0.662)T(0.028)S(0.007)DLSR 128.46 0.00060564 9097340000.0 8983380.0 8047480.0 8419900.0 7192140.0 7618690.0 7298830.0 7394690.0 7898050.0 9349570.0 7798230.0 True False 8485054.003475958 7660866.98128626 8962660.226316337 7875678.823204265 8218237.558583635 7253275.294606489 8142217.430419711 7870653.50796873 7651923.771479709 7729143.749131134 1.0977999994410506 0.9911663219030505 1.1595929015195077 1.0189587719971702 1.063279171060505 0.9384319311465595 1.0534436536175191 1.0183085945132673 0.9900092455053504 1.0 22.881877167522834 -5.852960935873726 2.2302971003811636 1.0054105845730008 1.0715696200444553 0.27916582561061065 0.05065940312831919 0.421093485367847 4.286195106378103 0.0166248177744384 0.020033513800304863 1.4029398911902168e-06 5.852960935873726 0.06615903547145452 LRVEFPR ddPTM_KYSE-520_SHP099_60min_R1 3 LRVEFPR 7 1 Q13242;S4R3G0;J3KTL2;Q07955;Q07955-3;Q07955-2 Q13242;J3KTL2 SRSF9;SRSF1 Serine/arginine-rich splicing factor 9;Serine/arginine-rich splicing factor 1 0 ;; 155.75 0.0012775 2925080000.0 1781578.0 1565376.0 1301354.0 1002202.0 1934013.0 1591817.0 1196227.0 1250864.0 1289028.0 1245604.0 False True 1682750.3168523053 1490172.9872827204 1385241.3610800188 1097450.9767569813 2086208.8200712975 1581881.879648463 1317153.2992104704 1246525.0447378526 1054973.008951527 1234568.9176252491 1.363026634502636 1.2070391259721147 1.1220445787219357 0.888934559334265 1.6898277530623542 1.2813232676319817 1.0668932940123554 1.0096844549882251 0.8545274337384233 1.0 20.23557594395064 -6.984728066030221 2.932397739712169 0.952654985959353 1.2516765585201326 0.3387890196392479 0.19287259081609123 0.3419722740997585 5.97597937564678 0.10191853882304543 0.059427513739190724 1.035790525054911e-07 6.984728066030221 0.29902157256077955 LRVQS(ph)PEPPAPER ddPTM_KYSE-520_SHP099_60min_R1 4 LRVQSPEPPAPER 13 1 A0A0G2JNZ2;A0A669KB89;Q14160;A0A0G2JMS7;A0A0G2JPP5;Q14160-2;Q14160-3;H0YCG0 A0A0G2JNZ2 SCRIB Protein scribble homolog 1 LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER;LRVQS(1)PEPPAPER 100.11 0.0020285 1934710000.0 1736370.0 1728340.0 1529580.0 1759890.0 1686110.0 1819360.0 1647210.0 1949140.0 2660450.0 1711780.0 True False 1640050.0947322212 1645307.9521087683 1628179.1742145317 1927149.4164697765 1818797.2643464236 1808004.6993826753 1813726.0620203991 1942378.8882726983 2177379.344486771 1696614.960944687 0.9666601630219209 0.9697591910852003 0.9596633365227135 1.1358790655699078 1.0720153400826458 1.0656541059710836 1.0690263281720114 1.144855452171168 1.2833668184055098 1.0 20.69422775826822 -5.2001455394070435 0.6980046365377012 1.1304928894676238 0.9238196983836198 0.401537390420589 0.07467760447080744 1.170391506043971 0.9332885347466511 0.03968811027563625 0.16053281853506027 6.307459354557181e-06 5.2001455394070435 -0.20667319108400406 LRVTS(ph)AEIK ddPTM_KYSE-520_SHP099_60min_R1 4 LRVTSAEIK 9 1 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 LRVT(0.189)S(0.811)AEIK;LRVT(0.032)S(0.968)AEIK;LRVT(0.023)S(0.977)AEIK;LRVT(0.007)S(0.993)AEIK 121.82 0.00047925 5006130000.0 2970900.0 2830740.0 2550040.0 2582490.0 2908780.0 2703930.0 2396050.0 2515790.0 3218510.0 2942850.0 True False 2806098.2546576755 2694747.0013726316 2714419.658608258 2827929.0731460713 3137684.4373057475 2687053.769898093 2638266.117194518 2507063.3116797996 2634109.7160345525 2916778.6385026556 0.9620538965885329 0.9238777896275306 0.9306224417502317 0.9695384613066846 1.075736223478548 0.9212402115223618 0.9045136584478302 0.8595315662921936 0.9030886613276856 1.0 21.475944470043448 -6.502052268904351 24.65369108334499 0.9061919135880244 0.9703250778035551 0.2133174979358925 0.05089575868994037 922.2738181623106 1091759.5302326675 0.01867395541202336 0.01628319694401529 3.1473694940564987e-07 6.502052268904351 0.06413316421553072 LRYDS(ph)YSSYCNAVAEAEIEAEEGGVEMK ddPTM_KYSE-520_SHP099_60min_R1 2 LRYDSYSSYCNAVAEAEIEAEEGGVEMK 28 1 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 1 LRYDS(0.72)Y(0.001)S(0.14)S(0.14)Y(0.001)CNAVAEAEIEAEEGGVEMK;LRYDS(0.748)YS(0.126)S(0.126)YCNAVAEAEIEAEEGGVEMK 259.91 4.410399999999999e-41 247894000.0 74351.0 111901.0 86868.0 131491.0 100047.0 108972.0 107658.0 157179.0 189890.0 113466.0 True False 70226.6018149561 106525.10799317471 92467.65027371433 143987.86510578947 107920.12971043802 108291.86532688905 118541.12128082775 156633.78273485453 155410.76273735389 112460.77951521211 0.6244541618658871 0.947220074877442 0.8222213172656038 1.280338494242011 0.9596245924637229 0.9629300614285787 1.0540663313185836 1.3927858530774928 1.3819107728693283 1.0 16.77906242641779 -3.6804264115571126 0.4159791820374758 1.2118518240119547 3.3029860556956006e-18 0.48796159685702456 0.16658614892471066 7.979354448507941 0.7511848189293986 0.13165312630657608 5.285230766241818 0.00020872457644965556 3.6804264115571126 -1.2118518240119547 LRYEDR ddPTM_KYSE-520_SHP099_60min_R1 2 LRYEDR 6 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 0 ; 134.12 0.03216 0.0 290560.0 285740.0 195852.0 185181.0 279980.0 279670.0 184761.0 217686.0 240410.0 233203.0 False True 274442.0575829998 272012.621495516 208476.9332942798 202780.54656330214 302012.8331317125 277924.4757916809 203438.44497359227 216930.8980742945 196757.6042429153 231137.00284918872 1.187356650817466 1.1768458452885522 0.9019626054003388 0.8773175392241783 1.3066399122981125 1.2024231186082304 0.8801638961561291 0.9385381630817314 0.8512596504130273 1.0 17.8183887145698 -6.7748540180997034 24.96082967067473 0.9123685607685265 1.1009274094664636 0.34124873714097836 0.12983705486208516 307.3738129949969 571930.1482000559 0.05923603636926335 0.040190855897733344 1.6793684190183916e-07 6.7748540180997034 0.18855884869793715 LS(ph)AAPVK ddPTM_KYSE-520_SHP099_60min_R1 1 LSAAPVK 7 0 A7E2S9-2;A7E2S9 A7E2S9-2 ANKRD30BL Putative ankyrin repeat domain-containing protein 30B-like 1 LS(1)AAPVK 78.516 0.024888 239580000.0 1924900.0 1740000.0 1658800.0 1774300.0 1922500.0 1644200.0 1773700.0 1952700.0 2011400.0 2092300.0 True False 1818121.9598069815 1656407.788206753 1765728.902173842 1942928.9385372552 2073789.812471308 1633937.937914976 1953002.905643838 1945926.5394636083 1646180.4632677538 2073763.8497847705 0.8767256503172619 0.7987446537746651 0.8514609329105152 0.9369094454698426 1.0000125195964527 0.7879093552935438 0.9417672633489749 0.9383549335502063 0.7938128844509493 1.0 20.98382018568269 LS(ph)AETWDLLR ddPTM_KYSE-520_SHP099_60min_R1 8 LSAETWDLLR 10 0 A0A0A0MSK4;A0A0A0MRC4;Q86YR5-4;Q86YR5 A0A0A0MSK4 GPSM1 G-protein-signaling modulator 1 1 LS(1)AETWDLLR;LS(1)AETWDLLR;LS(1)AETWDLLR;LS(0.998)AET(0.002)WDLLR;LS(1)AETWDLLR;LS(1)AETWDLLR;LS(1)AETWDLLR;LS(1)AETWDLLR 163.46 6.6971e-05 202426000.0 403580.0 393188.0 368637.0 390963.0 415889.0 416694.0 437241.0 477006.0 508453.0 441325.0 True False 381192.61288321536 374298.6582927796 392399.9308600548 428120.005972688 448617.09821528173 414093.2581812086 481441.5873409357 475351.37752003747 416130.7522570736 437415.20384565485 0.8714663082852556 0.8557056430641437 0.8970880010803556 0.9787497147075694 1.0256092935754002 0.9466823616111077 1.1006512419051988 1.086728063727224 0.9513403937461405 1.0 18.738643841442663 -5.306321368047419 1.534450504241454 1.026399785612787 0.8578251677311084 0.6540312283139045 0.04695394430051488 0.24745826014407316 1.135019081056052 0.015844847451989073 0.0340409411160817 4.939450436120806e-06 5.306321368047419 -0.1685746178816787 LS(ph)AEYEK ddPTM_KYSE-520_SHP099_60min_R1 12 LSAEYEK 7 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 LS(1)AEYEK;LS(1)AEYEK;LS(1)AEYEK;LS(1)AEYEK;LS(1)AEYEK;LS(1)AEYEK;LS(1)AEYEK;LS(1)AEYEK;LS(1)AEYEK;LS(1)AEYEK;LS(1)AEYEK;LS(1)AEYEK 150.35 0.0013402999999999998 98394600000.0 64200100.0 55341900.0 44996070.0 59933200.0 57519900.0 60019300.0 65078700.0 65043900.0 56215400.0 58855700.0 True False 60638792.473273546 52683192.05411453 47896588.668457545 65629233.30842634 62046388.88653759 59644697.28567111 71657490.1029056 64818277.89226033 46008100.43491196 58334284.28704164 1.0395052106046636 0.9031257124006158 0.8210709920220497 1.1250542302960114 1.0636350414660107 1.0224638566264292 1.2283940906912536 1.111152364076558 0.788697435774183 1.0 25.797840699149916 -5.269865525932687 24.98362415132099 1.060159849814815 0.9194231437196339 0.1929320742408449 0.11756566679403417 911.1707709895666 2701630.855965932 0.03346708795192308 0.050550553875184624 5.371981075591762e-06 5.269865525932687 -0.14073670609518119 LS(ph)AEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEK ddPTM_KYSE-520_SHP099_60min_R1 6 LSAEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEK 38 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 LS(1)AEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEK;LS(1)AEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEK;LS(1)AEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEK;LS(1)AEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEK;LS(1)AEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEK;LS(1)AEYEKVELPSEEQVSGSQGPSEEKPAPLATEVFDEK 397.5 3.3136999999999994e-115 17671540000.0 2201235.0 2179981.0 1741475.0 2016928.0 1966222.0 1982247.0 1795768.0 2153526.0 2730222.0 1963344.0 True False 2079128.1064968184 2075251.4405418104 1853733.2649585183 2208616.2307084845 2120952.4851271575 1969875.0611958092 1977301.7544467647 2146055.920942748 2234482.508095761 1945950.2996185187 1.068438442083751 1.0664462709806308 0.9526107965459969 1.1349808014837062 1.089931477460111 1.0122946416370349 1.0161111282412465 1.102831825336679 1.1482731642908894 1.0 20.892043432881255 -7.283324974978396 24.116127266959776 1.0941643816016378 1.049180946278833 0.06307213923551014 0.05774165491963891 1256.4805095846345 1384528.5900167776 0.03139351010828067 0.015104919196499849 5.208048560814213e-08 7.283324974978396 -0.04498343532280469 LS(ph)AKPAPPKPEPK ddPTM_KYSE-520_SHP099_60min_R1 3 LSAKPAPPKPEPK 13 2 Q15651;A0A087WZE9;Q15651-2;P05204 Q15651;P05204 HMGN3;HMGN2 High mobility group nucleosome-binding domain-containing protein 3;Non-histone chromosomal protein HMG-17 1 LS(1)AKPAPPKPEPK;LS(1)AKPAPPKPEPK;LS(1)AKPAPPKPEPK 117.67 8.8128e-05 4992070000.0 4068760.0 3818600.0 3633130.0 3981950.0 3637180.0 3454070.0 3752680.0 4259340.0 4209180.0 4379110.0 True False 3843057.771928029 3635148.724164547 3867327.3730135337 4360393.330783074 3923405.373276673 3432511.8679077867 4132037.5170274116 4244565.343677425 3444899.0167929563 4340314.492296025 0.8854330207521558 0.8375311813503068 0.8910246895421899 1.004626125254907 0.9039449515099982 0.7908440445964064 0.9520133908180384 0.9779395827678955 0.7936980195577039 1.0 22.04936815117312 -10.229834872854594 4.357363632110405 1.0000457633505806 0.896149676007196 0.17914528268017993 0.0684113352186924 14568329.004243763 34202245.38028167 3913.4441626147473 0.01675732395443509 5.890675876490677e-11 10.229834872854594 -0.10389608734338462 LS(ph)AKPAPPKPEPKPK ddPTM_KYSE-520_SHP099_60min_R1 1 LSAKPAPPKPEPKPK 15 3 P05204 P05204 HMGN2 Non-histone chromosomal protein HMG-17 1 LS(1)AKPAPPKPEPKPK 87.654 0.0033281 1121700000.0 845680.0 813530.0 865800.0 851720.0 664480.0 678680.0 710930.0 893960.0 953140.0 897640.0 True False 798768.4445787162 774446.7976665748 921610.8533289799 932667.2127210443 716770.7956259744 674444.1063764369 782797.7424081713 890859.0614118336 780073.8027041 889687.6079533515 0.8978077669489105 0.8704704783380337 1.0358814094860387 1.0483086471964735 0.8056432271489573 0.7580684504844758 0.8798568569578361 1.0013167020064233 0.8767951758916723 1.0 19.762939332346164 -1.0032963329502573 24.985685188405277 0.9144998100206325 0.0011952958456582508 0.0 0.09415161107414682 0.0 0.0 0.02318869897944491 0.0 0.09924386448597022 1.0032963329502573 -0.9133045141749743 LS(ph)AKPPAK ddPTM_KYSE-520_SHP099_60min_R1 2 LSAKPPAK 8 1 A6NEL0;P05114;F2Z2W6;F2Z2Y5;H7BXJ5;A0A494C035 A6NEL0 HMGN1 Non-histone chromosomal protein HMG-14 1 LS(1)AKPPAK;LS(1)AKPPAK 90.82700000000001 0.006689799999999999 724100000.0 1571750.0 1513790.0 1444180.0 1493660.0 1456000.0 1319120.0 1407770.0 1598610.0 1651430.0 1687300.0 True False 1484561.8942940533 1441065.2561548853 1537274.1535697002 1635616.997314744 1570578.9164932233 1310886.882777281 1550081.1301111933 1593064.795028377 1351571.9411625068 1672351.834699537 0.8877090714351846 0.8616998087688852 0.919228909654585 0.9780340257219899 0.939143835588521 0.7838583099427768 0.9268869731528047 0.9525894981988614 0.8081863595439753 1.0 20.673446967447678 -10.163143256142817 4.417489029708589 1.0000115988059572 0.8980426981677372 0.21938418244132862 0.059062630124322404 1.2068592344365517e-05 2.286323392335286e-06 0.05790152298676474 0.014040360639475228 6.868418413652695e-11 10.163143256142817 -0.10196890063822006 LS(ph)ALLQETK ddPTM_KYSE-520_SHP099_60min_R1 2 LSALLQETK 9 0 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 1 LS(1)ALLQETK;LS(1)ALLQETK 155.86 0.00019357 41527000.0 103985.0 96532.0 95178.0 97316.0 97277.0 96584.0 94186.0 106606.0 98891.0 112076.0 True False 98216.74476104163 91894.45782251406 101313.32617018434 106564.88338087765 104932.14646958203 95981.18342998432 103707.24004677821 106236.20866802732 80934.88723924205 111083.09383380857 0.8841736520949237 0.8272587182348141 0.91204991392983 0.9593258497130931 0.9446275112446096 0.8640485254541234 0.9336005729362798 0.9563670312150949 0.7285977050686826 1.0 16.761279738525936 -4.782166032512218 23.59651813514089 0.9126364884842021 0.8557162150734487 0.09128217968313557 0.07144132081100489 260.996903333322 297136.03086376056 0.018052399677081245 0.03766370284745294 1.6513303673531748e-05 4.782166032512218 -0.05692027341075334 LS(ph)AQAQVAEDILDK ddPTM_KYSE-520_SHP099_60min_R1 4 LSAQAQVAEDILDK 14 0 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;F8W9S7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 LS(1)AQAQVAEDILDK;LS(1)AQAQVAEDILDK;LS(1)AQAQVAEDILDK;LS(1)AQAQVAEDILDK 174.19 1.6855e-08 514100000.0 226927.0 248717.0 186676.0 181933.0 194083.0 232799.0 202382.0 242325.0 262086.0 252904.0 True False 214338.9069422408 236768.2619881718 198709.43365216046 199223.8576198492 209356.22791878734 231346.01508859554 222840.74761798023 241484.43113408022 214497.78905040864 250663.46731633478 0.8550863404109353 0.9445662924999464 0.7927339224163493 0.7947861718853139 0.8352083778310697 0.9229347122875277 0.8890036908998687 0.9633810372108564 0.8557201866984253 1.0 17.935392221856677 -6.26516825003484 23.774170174512463 0.9215939827962762 0.8444016477370834 0.36668311922235597 0.053534874816993296 204.76570663571133 1305516.6035642298 0.01883698018434203 0.017261973284241595 5.430399116315072e-07 6.26516825003484 -0.07719233505919287 LS(ph)CEPVMEEK ddPTM_KYSE-520_SHP099_60min_R1 2 LSCEPVMEEK 10 0 C9JEZ4;Q9UKI2 C9JEZ4 CDC42EP3 Cdc42 effector protein 3 1 LS(1)CEPVMEEK;LS(1)CEPVMEEK 127.52 0.00040294 906390000.0 1446780.0 1427150.0 1227480.0 1345720.0 1443670.0 1555730.0 1571280.0 1778070.0 1877650.0 1699130.0 True False 1366524.2293155743 1358587.571804177 1306605.3248374423 1473616.824194527 1557278.6156413304 1546020.112001256 1730120.316615015 1771902.290174656 1536716.0917046298 1684077.0301031377 0.8114380784778499 0.8067253145308758 0.7758584087792124 0.8750293471458835 0.9247074734734421 0.9180222070403593 1.0273403684563394 1.0521503817827975 0.912497507082866 1.0 20.683526698468494 -5.87259538153625 1.107750798272556 0.997895807208939 0.7945510999249323 0.7969840553256783 0.040790661999307566 0.2096511256081592 0.5485980154736486 0.018621294068923232 0.024719007367423284 1.3409254035237733e-06 5.87259538153625 -0.20334470728400666 LS(ph)DELLVK ddPTM_KYSE-520_SHP099_60min_R1 4 LSDELLVK 8 0 Q66GS9 Q66GS9 CEP135 Centrosomal protein of 135 kDa 1 LS(1)DELLVK;LS(1)DELLVK;LS(1)DELLVK;LS(1)DELLVK 85.676 0.0051614 133001700.0 339621.0 295780.0 273437.0 266100.0 297038.0 286734.0 261272.0 279728.0 344683.0 293729.0 True False 320781.54611232167 281570.2848251687 291063.18653466896 291390.0639941177 320413.2006849685 284944.386747423 287683.92352899397 278757.6888570057 282097.2559513368 291126.789577704 1.1018619982641706 0.9671740798351209 0.9997815280307 1.0009043290615598 1.1005967576867322 0.9787638820898312 0.9881739978182561 0.957513010950863 0.9689841885060972 1.0 18.15128807725232 -6.470763379652579 24.999749990662362 0.9763186881112532 1.0279088485038834 0.30396855543020573 0.04131646661423579 465.6388563761615 223367.1667113512 0.014548599526836516 0.012830502818786073 3.382490771252742e-07 6.470763379652579 0.0515901603926302 LS(ph)DGDMTSALR ddPTM_KYSE-520_SHP099_60min_R1 2 LSDGDMTSALR 11 0 A0A0U1RQJ8;Q8WXE1-5;Q8WXE1-3;Q8WXE1-2;Q8WXE1 A0A0U1RQJ8 ATRIP ATR-interacting protein 1 LS(1)DGDMTSALR;LS(1)DGDMTSALR 199.4 3.8937e-07 644420000.0 501530.0 473560.0 409980.0 433610.0 423350.0 478640.0 496760.0 466700.0 490720.0 480910.0 True False 473709.1311247318 450809.4667719483 436407.9667911929 474820.16403039946 456665.23646799877 475652.63021750696 546977.3487103981 465081.1266285992 401617.6180445222 476649.51154231786 0.9938311477377334 0.9457881647948035 0.9155741403764089 0.9961620698907273 0.9580734384691699 0.9979085653070634 1.147546227290818 0.9757297875407733 0.842584767883195 1.0 18.86256929240766 -6.2756319467610275 8.346124027910186 1.0009621988816877 0.9603065589680052 0.03774935183977546 0.07200169315080729 0.6561354238639372 314.5996433445978 0.026444956900909585 0.02407150950877246 5.301125100959943e-07 6.2756319467610275 -0.040655639913682484 LS(ph)DVDANTAIK ddPTM_KYSE-520_SHP099_60min_R1 2 LSDVDANTAIK 11 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LS(1)DVDANTAIK;LS(1)DVDANTAIK 226.23 3.8488999999999995e-10 1216260000.0 1620220.0 1333690.0 1137750.0 1319530.0 1406040.0 1438730.0 1430870.0 1583220.0 1402420.0 1471560.0 True False 1530343.1667715064 1269617.5304904957 1211091.1854643654 1444937.73446884 1516687.3487267422 1429750.3524002028 1575516.3035454685 1577728.1793463267 1147775.8801312319 1458523.1232563553 1.04924162145253 0.87048159212992 0.8303544634660548 0.9906855170337073 1.0398788504226983 0.980272667332203 1.0802134559429608 1.0817299734157313 0.7869439036171486 1.0 20.47607682806135 -5.486640112093776 21.65390047335127 1.0036316918575081 0.9118126887005157 0.12094360746177213 0.09381940578888028 216.22093308732494 129198.2224626634 0.02621563438023323 0.03885044095118417 3.261068248313907e-06 5.486640112093776 -0.09181900315699243 LS(ph)DVLK ddPTM_KYSE-520_SHP099_60min_R1 10 LSDVLK 6 0 Q14669-3;Q14669;Q14669-2;Q14669-4;Q92797;M0R3C7;A0A087WUE9;Q92797-2 Q14669-3;Q92797 TRIP12;SYMPK E3 ubiquitin-protein ligase TRIP12;Symplekin 1 LS(1)DVLK;LS(1)DVLK;LS(1)DVLK;LS(1)DVLK;LS(1)DVLK;LS(1)DVLK;LS(1)DVLK;LS(1)DVLK;LS(1)DVLK;LS(1)DVLK 139.97 0.006927 2758915000.0 5445162.0 4904932.0 4318880.0 4854034.0 4770493.0 4591661.0 4786202.0 5174222.0 5296055.0 4795970.0 True False 5143108.009198666 4669291.704266975 4597281.915252328 5315359.931941463 5145903.6587077705 4563002.740508832 5270038.006990099 5156273.831554492 4334424.914682061 4753481.437008201 1.0819665706816544 0.9822888268615572 0.9671399743901843 1.1182035740286602 1.0825546974149027 0.9599285914916175 1.108669104282232 1.084736292732807 0.9118421881142571 1.0 22.18055309585604 -7.759434066782637 24.999725207727824 0.9559210907193874 1.045841589464596 0.2803580896574993 0.059033105209783526 68.69372985278746 856478.517018653 0.04558230934104112 0.015256503877295068 1.7400668494429097e-08 7.759434066782637 0.08992049874520869 LS(ph)ELLR ddPTM_KYSE-520_SHP099_60min_R1 2 LSELLR 6 0 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538;P08238;P07900;P07900-2 Q92538-3;P08238;P07900 GBF1;HSP90AB1;HSP90AA1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1;Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha 1 LS(1)ELLR;LS(1)ELLR 116.37 0.014341999999999999 7882300.0 64809.0 60544.0 57026.0 51296.0 61666.0 60682.0 52010.0 56777.0 66654.0 57280.0 True False 61213.915576461506 57635.375361603226 60701.987204826044 56171.156417295206 66518.76336845542 60303.26112915499 57267.678368684654 56580.05383885145 54551.313810603926 56772.54376316564 1.0782309813670434 1.015198043653584 1.0692137991570823 0.989407074159312 1.1716713565970807 1.0621905789657446 1.0087213743246126 0.9966094539445477 0.9608749264111209 1.0 15.792905764323882 -6.882032943113537 3.3843053401003 0.9865461202484069 1.0638157149405836 0.38700507189853095 0.04552659325091862 0.27143129283785444 6.073215509879434 0.021150321321792367 0.013610711907426607 1.3121003667603647e-07 6.882032943113537 0.07726959469217665 LS(ph)ES(ph)SASPQPK ddPTM_KYSE-520_SHP099_60min_R1 1 LSESSASPQPK 11 0 Q8N5Y2;Q8N5Y2-3;Q8N5Y2-2;A0A3B3IT59;Q8N5Y2-6;Q8N5Y2-4;A0A3B3ITL5;A0A3B3ITF3;A0A3F2YNX2;A0A3B3IRN2;A0A3B3IU80;A0A3B3IUB0;A0A3B3IS72;A0A3B3ISB4;A0A3B3IRI6;A0A3B3ITV8;A0A3B3IRT2;A0A3B3ITF8;A0A3B3IT49;Q8N5Y2-5;A0A3B3ITX5 Q8N5Y2 MSL3 Male-specific lethal 3 homolog 2 LS(0.998)ES(0.998)S(0.002)AS(0.002)PQPK 55.353 0.041688 3340900000.0 585460.0 555490.0 556450.0 420430.0 463890.0 551630.0 471710.0 576990.0 635840.0 514980.0 True False 552983.3667144243 528803.4265925114 592319.6573514794 460387.5407931109 500395.50382695184 548187.0725532415 519395.0502459572 574988.556360478 520387.48422201857 510417.67784837674 1.0833938374655825 1.0360209874031758 1.1604607031800969 0.9019819664825017 0.9803647591837482 1.0739970348677548 1.0175882865880035 1.126505960342703 1.0195326431789524 1.0 18.96131877082512 -5.227435915605753 24.999164231656966 1.0232652466944143 1.0875647184778894 0.23552205836179863 0.06193373402361741 1149.444642941325 845064.5109807701 0.017485879941691384 0.030284461932153856 5.923304845783734e-06 5.227435915605753 0.06429947178347506 LS(ph)ETDFK ddPTM_KYSE-520_SHP099_60min_R1 1 LSETDFK 7 0 Q15007;A0A087X1R4;Q15007-2 Q15007 WTAP Pre-mRNA-splicing regulator WTAP 1 LS(0.999)ET(0.001)DFK 78.098 0.033341 0.0 108210.0 85630.0 76391.0 85576.0 85723.0 93864.0 80292.0 98108.0 98990.0 104570.0 True False 102207.37558871294 81516.20626674953 81315.28608992166 93709.11731063752 92468.91240284932 93278.159958917 88408.69893440547 97767.68624657925 81015.91133482878 103643.59115422893 0.986142746024896 0.7865050347922401 0.7845664665258348 0.9041477265216697 0.8921816715637448 0.8999896560908678 0.8530069052011825 0.9433066256947242 0.7816779641904865 1.0 16.661271383977518 LS(ph)FSDTYQDYEEYWR ddPTM_KYSE-520_SHP099_60min_R1 7 LSFSDTYQDYEEYWR 15 0 E9PJ60;Q9UHI6 E9PJ60 DDX20 Probable ATP-dependent RNA helicase DDX20 1 LS(0.999)FS(0.001)DTYQDYEEYWR;LS(0.995)FS(0.005)DTYQDYEEYWR;LS(1)FSDTYQDYEEYWR;LS(0.999)FSDTYQDYEEYWR;LS(1)FSDTYQDYEEYWR;LS(1)FSDTYQDYEEYWR;LS(0.801)FS(0.198)DT(0.001)YQDYEEYWR 261.17 5.6058e-25 671295000.0 479910.0 474674.0 357857.0 405700.0 364534.0 410390.0 380699.0 459992.0 434146.0 452960.0 True False 453288.43562313326 451869.9485398003 380925.03481144435 444257.6060218471 393220.7518852618 407828.6037835591 419183.7701841929 458396.3951149403 355316.03033003956 448947.12679754733 1.009669977969463 1.0065103919098497 0.8484852938667373 0.9895544029668889 0.8758731895450679 0.9084112124576964 0.9337040937856894 1.0210476195377325 0.7914429319652808 1.0 18.776186020965373 -4.657747400801391 12.028990935945435 0.9226627722648675 1.0087635200084808 0.21053879929768649 0.0673588903324078 0.653165880174826 71.50716891532727 0.015924641197747495 0.042156311903969214 2.1991385883828194e-05 4.657747400801391 0.08610074774361332 LS(ph)GFSFK ddPTM_KYSE-520_SHP099_60min_R1 3 LSGFSFK 7 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 LS(0.999)GFS(0.001)FK;LS(1)GFSFK;LS(0.997)GFS(0.003)FK 98.58200000000001 0.005534399999999999 2324069000.0 2541440.0 2060820.0 2016010.0 2308380.0 2156740.0 2137730.0 2401520.0 2525550.0 2356920.0 2338190.0 True False 2400461.256964966 1961815.1138461134 2145965.2303300514 2527767.741160249 2326463.16782802 2124387.634119317 2644289.078176575 2516789.456517803 1928962.7411181417 2317475.4556842954 1.035808707737173 0.8465311289637094 0.9259926464664106 1.09074196879201 1.0038782340161057 0.9166818267303012 1.141021395368254 1.0860047947194569 0.8323551977160271 1.0 21.144122628714328 -5.21502218579397 23.450822243877596 1.014984861618899 0.9271527109871979 0.11151339426236817 0.09398961410886199 403.76769222675057 203989.0302255705 0.02526775608343037 0.04376481665342231 6.095057600390811e-06 5.21502218579397 -0.08783215063170113 LS(ph)GSARPQELVGTFIQQEVGKPEDEASGSFFK ddPTM_KYSE-520_SHP099_60min_R1 2 LSGSARPQELVGTFIQQEVGKPEDEASGSFFK 32 2 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 LS(0.878)GS(0.12)ARPQELVGT(0.002)FIQQEVGKPEDEASGSFFK;LS(0.976)GS(0.024)ARPQELVGTFIQQEVGKPEDEASGSFFK 146.61 8.089199999999999e-07 332936000.0 144833.0 141723.0 112458.0 137868.0 133937.0 121065.0 122214.0 129201.0 159175.0 137555.0 True False 136798.8247725724 134914.4143494401 119707.22261916206 150970.93326847436 144477.07990271517 120309.3884282183 134568.58381369797 128752.83188674005 130272.83247521345 136336.36971617053 1.003392015332113 0.9895702418240218 0.8780285324332195 1.1073415962502928 1.0597104808019475 0.8824452981891939 0.9870336440221139 0.944376266984238 0.9555251672493528 1.0 17.056810947877892 -6.250999374899887 24.91888422624426 0.9524719375317332 1.0049482706484507 0.15786548451078997 0.06185696683375792 1418.759287536966 3386391.2822738294 0.021287552785239052 0.021086605565138496 5.610487835753246e-07 6.250999374899887 0.05247633311671751 LS(ph)GVMVPAPIQDLEALR ddPTM_KYSE-520_SHP099_60min_R1 4 LSGVMVPAPIQDLEALR 17 0 A0A1W2PQD2;Q9UBB4-2;Q9UBB4 A0A1W2PQD2 ATXN10 Ataxin-10 1 LS(1)GVMVPAPIQDLEALR;LS(1)GVMVPAPIQDLEALR;LS(1)GVMVPAPIQDLEALR;LS(1)GVMVPAPIQDLEALR 238.65 3.0739e-23 1021338000.0 1477496.0 1293356.0 1200239.0 1142177.0 1152538.0 1456745.0 1110672.0 1201705.0 1569782.0 1271456.0 True False 1395536.3515647464 1231221.2363930661 1277608.3263902983 1250729.158671962 1243236.1835558165 1447652.9141028777 1222949.5648741357 1197536.5658350557 1284749.1597839205 1260191.8890177992 1.1073998838799346 0.9770109196248573 1.0138204645850193 0.9924910401119845 0.986545139982453 1.1487559368686198 0.9704471005818881 0.95028112485982 1.0194869297129514 1.0 20.26521199849091 LS(ph)LDLSHR ddPTM_KYSE-520_SHP099_60min_R1 5 LSLDLSHR 8 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 LS(1)LDLSHR;LS(1)LDLSHR;LS(0.999)LDLS(0.001)HR;LS(1)LDLSHR;LS(0.867)LDLS(0.133)HR 172.27 7.372100000000001e-05 3094530000.0 4236220.0 3791400.0 3386260.0 3775370.0 3788700.0 3445610.0 3565050.0 3722610.0 3864760.0 3894800.0 True False 4001228.431904793 3609255.4529925743 3604543.737807563 4134180.0296936235 4086849.1352457977 3424104.669905868 3925440.045535074 3709697.134773708 3163017.0066713137 3860295.1021085437 1.0365084342177024 0.9349687931943731 0.9337482349053351 1.0709492202903037 1.0586882679030178 0.8870059359025627 1.0168756381839688 0.9609879650774426 0.8193718156271608 1.0 21.88027970854683 -7.535926433270885 24.6488350560195 0.9031838539510112 0.9885520647536191 0.17917432811765222 0.06884365138654877 321.44445965006776 607236.6823039895 0.045503199922969334 0.01722184100499221 2.9112102168371375e-08 7.535926433270885 0.08536821080260792 LS(ph)LEGDHSTPPSAYGSVK ddPTM_KYSE-520_SHP099_60min_R1 4 LSLEGDHSTPPSAYGSVK 18 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LS(1)LEGDHSTPPSAYGSVK;LS(1)LEGDHSTPPSAYGSVK;LS(1)LEGDHSTPPSAYGSVK;LS(1)LEGDHSTPPSAYGSVK 207.43 1.9149e-14 19958400000.0 2680070.0 3802050.0 3359090.0 7658190.0 2973080.0 2967640.0 3004040.0 2766630.0 3534620.0 2861500.0 True False 2531401.174512909 3619393.8110065986 3575622.3161340323 8386022.075081226 3207044.4814887866 2949117.8579698363 3307717.679805108 2757033.206266298 2892822.1085191737 2836149.33621331 0.892548619422387 1.2761647508445515 1.2607313269716718 2.956833749198073 1.130774194623573 1.0398316549534576 1.1662706323572558 0.972104385006523 1.0199822948609365 1.0 21.435502068383318 -5.968980134902656 24.99992418272644 1.0501952316887782 1.6114584030915624 0.21541344582680944 0.5084691613259917 328.2748489598742 264566.0713646077 0.16481129226675612 0.1868768026320449 1.0740385388972095e-06 5.968980134902656 0.5612631714027843 LS(ph)LENLEK ddPTM_KYSE-520_SHP099_60min_R1 3 LSLENLEK 8 0 A0A3B3ITL0;Q9Y2H2;A0A3B3IRJ9;Q9Y2H2-4;A0A3B3ITR9;A0A3B3ISI3;A0A1B0GUS5;A0A0J9YY79 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 LS(1)LENLEK;LS(1)LENLEK;LS(1)LENLEK 92.19 0.004051300000000001 320099000.0 404400.0 361146.0 293868.0 312023.0 381771.0 329335.0 306499.0 339761.0 420120.0 367146.0 True False 381967.12584858603 343796.00406880234 312811.20148542454 341677.5721068643 411814.2057201474 327279.49810438434 337482.9100619781 338582.44839181367 343836.7983633533 363893.37207526545 1.0496677190635457 0.9447712721673142 0.8596232454069667 0.9389496988040602 1.1316892181124154 0.8993829600081089 0.9274225252780235 0.9304441201028069 0.9448833772444645 1.0 18.473156248723765 -9.614640227490554 20.929060667378895 0.9999999999999941 0.9562583955424357 0.026971371052684656 0.07357531032557704 0.0 0.0 0.07303277409284988 0.017713049512746656 2.4286211482977604e-10 9.614640227490554 -0.04374160445755837 LS(ph)LGASR ddPTM_KYSE-520_SHP099_60min_R1 1 LSLGASR 7 0 O43318-3;O43318;Q9UG54;O43318-4;O43318-2 O43318-3 MAP3K7;DKFZp586F0420 Mitogen-activated protein kinase kinase kinase 7 1 LS(1)LGASR 114.51 0.0065815 0.0 188180.0 157990.0 135910.0 155190.0 160330.0 175630.0 166730.0 163820.0 182680.0 177510.0 True False 177741.28027247044 150399.92325217515 144670.97606368855 169939.2109404252 172947.0588470872 174533.82802335924 183584.69552799073 163251.7466558753 149509.91698804474 175937.3995006901 1.010252969390816 0.8548490751767944 0.8222866569260681 0.9659072569147449 0.9830033826685544 0.9920223245238693 1.0434660058009475 0.9278967810095143 0.8497904221180573 1.0 17.424702667530795 -5.3920896662018105 11.658229376008588 0.9682125049747099 0.8917286154018457 0.1916497025051972 0.06583233295304607 0.8359798607025707 74.04149265086262 0.019295231893742236 0.02862151804586645 4.0542482115223285e-06 5.3920896662018105 -0.07648388957286423 LS(ph)LGEFFAQR ddPTM_KYSE-520_SHP099_60min_R1 5 LSLGEFFAQR 10 0 H0Y966;Q8TEP8 H0Y966 CEP192 Centrosomal protein of 192 kDa 1 LS(1)LGEFFAQR;LS(1)LGEFFAQR;LS(1)LGEFFAQR;LS(1)LGEFFAQR;LS(1)LGEFFAQR 149.23 0.00011481 128071000.0 187747.4 165221.1 171833.6 173846.4 176838.0 163292.4 154056.4 175013.1 198816.0 162921.2 True False 177332.67745683697 157283.63035407278 182910.268799481 190368.7095871739 190754.1445294156 162273.23156135972 169629.924357574 174406.02040446457 162716.02614350276 161477.84491877575 1.0981858071368014 0.9740260679920971 1.1327267148721603 1.1789153470739617 1.1813022685890189 1.0049256704099814 1.050484197648902 1.0800616053068566 1.0076678087037254 1.0 17.300976712307047 -6.28295283350439 24.874728508314345 1.0349977273495363 1.1100631620152577 0.33979982124765495 0.058414995085462405 1134.1031977856492 1311291.82880499 0.0227680709308808 0.020100495148358984 5.2125131846262e-07 6.28295283350439 0.07506543466572135 LS(ph)LGLSR ddPTM_KYSE-520_SHP099_60min_R1 6 LSLGLSR 7 0 Q9NR12-2;Q9NR12;D6RAN1;H0Y8W6;D6RF83;H7BYK4;D6RH06;Q9NR12-3;Q9NR12-5;Q9NR12-6;Q9NR12-4 Q9NR12-2 PDLIM7 PDZ and LIM domain protein 7 1 LS(1)LGLSR;LS(1)LGLSR;LS(1)LGLSR;LS(1)LGLSR;LS(1)LGLSR;LS(1)LGLSR 147.4 0.0014355000000000001 3010690000.0 2353900.0 2204170.0 2133390.0 2128010.0 2034590.0 2101880.0 2088930.0 2011190.0 2279680.0 2128550.0 True False 2223324.474616687 2098278.3646733784 2270911.732944691 2330255.4305904666 2194700.657766451 2088761.3872672024 2300099.430392164 2004213.6513052757 1865747.5780561948 2109692.702986839 1.053861764544652 0.9945895730229807 1.0764182526344253 1.1045473244948714 1.0402939985805801 0.9900785002052654 1.0902532995140726 0.9500026465787034 0.8843693564540114 1.0 21.008601441164945 -7.35325568345488 6.129175957985708 0.9352106639807114 1.0481514545306012 0.5488493434289214 0.043548979718876085 0.17520792068904162 9.57126741931326 0.024287790543554025 0.011445681071227036 4.433475537865431e-08 7.35325568345488 0.11294079054988981 LS(ph)LPGK ddPTM_KYSE-520_SHP099_60min_R1 1 LSLPGK 6 0 Q8TCT6-3;Q8TCT6 REV__A6NCT7 SPPL3 Signal peptide peptidase-like 3 1 LS(1)LPGK 77.282 0.06189 0.0 1066000.0 935880.0 831250.0 685970.0 730470.0 726110.0 664530.0 646550.0 836460.0 803930.0 True False 1006866.8549816832 890918.9200154808 884833.7050470263 751164.3825555989 787953.8331942344 721578.0781531719 731707.1775878107 644307.2689559042 684579.94944066 796807.805648075 1.2636257424244972 1.118110181276226 1.1104731891115907 0.9427171486411927 0.9888881956337774 0.9055861062584399 0.9182982049136487 0.8086106390886367 0.8591531666583817 1.0 19.60387225476777 -4.597290146366523 0.6147044056207969 0.8798265716047812 1.4015908577207419 0.8255388498194032 0.05452353793268446 0.9272211725942525 0.3517217338106331 0.027753764648976803 0.3233593435057596 2.5276087704361226e-05 4.597290146366523 0.5217642861159607 LS(ph)LQDVPELVDAK ddPTM_KYSE-520_SHP099_60min_R1 5 LSLQDVPELVDAK 13 0 Q8N5W9 Q8N5W9 FAM101B Filamin-interacting protein FAM101B 1 LS(1)LQDVPELVDAK;LS(1)LQDVPELVDAK;LS(1)LQDVPELVDAK;LS(1)LQDVPELVDAK;LS(1)LQDVPELVDAK 212.69 3.4109000000000003e-11 437229000.0 1299680.0 1182800.0 1075210.0 1191440.0 1268680.0 1426960.0 1331050.0 1459800.0 1440140.0 1444800.0 True False 1227584.1595521527 1125976.5125810052 1144519.7569968256 1304674.0993805015 1368517.8981982325 1418053.813336065 1465605.5237961498 1454736.29451988 1178646.8789750522 1432000.196037391 0.8572513907114712 0.7862963396910072 0.7992455309461012 0.9110851402051311 0.9556687924940055 0.9902609072680869 1.0234674044401326 1.0158771615712094 0.8230773167745268 1.0 20.449600259427847 -5.480442227790056 2.5049831684945314 0.9732225059102743 0.8108435301394568 0.5995941346384992 0.05596881076256286 0.19290742379356568 2.4019283079784515 0.017416466734076257 0.026760653946705088 3.307941131615051e-06 5.480442227790056 -0.1623789757708175 LS(ph)LQGHPTDLQTSNVK ddPTM_KYSE-520_SHP099_60min_R1 1 LSLQGHPTDLQTSNVK 16 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 LS(0.661)LQGHPT(0.338)DLQTSNVK 185.2 4.8012e-12 410250000.0 363460.0 473070.0 476330.0 870360.0 370530.0 303540.0 340010.0 263670.0 472040.0 318720.0 True False 343298.1492604534 450343.007107453 507034.99395494704 953078.7527167245 399688.60297268874 301645.4942675537 374381.528977821 262755.39031104033 386329.43516004295 315896.3887604078 1.0867428735338551 1.4256035305582948 1.605067395498176 3.0170612473813017 1.2652522067158967 0.9548874409461428 1.1851402621185751 0.831777125854793 1.2229624931010377 1.0 18.269091919127707 -5.984712075498826 24.99999903173765 1.0456307990205562 1.7947755659179072 0.35308230503672433 0.47692023469706524 282.1257848887849 461351.49211156904 0.15524472277978393 0.17597239808678708 1.0358286631075956e-06 5.984712075498826 0.749144766897351 LS(ph)LS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 5 LSLSPLR 7 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 2 LS(1)LS(1)PLR;LS(1)LS(1)PLR;LS(1)LS(1)PLR;LS(1)LS(1)PLR;LS(1)LS(1)PLR 93.096 0.0071387 1197137000.0 2458580.0 1886350.0 1757400.0 2357000.0 2245430.0 2223260.0 2360320.0 2643970.0 2229550.0 2352820.0 True False 2322197.6663422757 1795726.914530926 1870684.8159394169 2581008.57134211 2422132.566250952 2209383.809663578 2598924.1801033188 2634798.685177238 1824719.9223817312 2331975.8452662607 0.9958069124327192 0.7700452464703352 0.8021887618333481 1.106790439781513 1.0386610869781103 0.9474299719478074 1.114473027402468 1.1298567652515294 0.7824780544300141 1.0 21.153121414425595 -5.254061969460347 24.958296849528722 1.024562037719304 0.8474167942599062 0.3074981920949551 0.11015449819903902 626.8980740192076 2120834.940886097 0.029500829244951832 0.04979799342718828 5.571062497941444e-06 5.254061969460347 -0.17714524345939786 LS(ph)LT(ph)SDPEEGDPLALGPESPGEPQPPQLK ddPTM_KYSE-520_SHP099_60min_R1 4 LSLTSDPEEGDPLALGPESPGEPQPPQLK 29 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 2 LS(0.718)LT(0.718)S(0.565)DPEEGDPLALGPESPGEPQPPQLK;LS(0.667)LT(0.667)S(0.667)DPEEGDPLALGPESPGEPQPPQLK;LS(0.667)LT(0.667)S(0.667)DPEEGDPLALGPESPGEPQPPQLK;LS(0.667)LT(0.667)S(0.667)DPEEGDPLALGPESPGEPQPPQLK 122.5 1.6436000000000002e-06 428069000.0 237515.0 207508.0 195509.0 209051.0 234056.0 227334.0 233764.0 261896.0 267015.0 262744.0 True False 224339.56947558615 197539.00420414173 208111.82296546007 228919.1441865251 252474.87560352913 225915.12418073413 257395.1464367852 260987.54390298584 218531.80690038716 260416.29257173877 0.8614651843021138 0.7585508658208251 0.7991505481867268 0.8790507764542539 0.9695049150351376 0.8675153230610548 0.9883987821763444 1.0021936082631608 0.8391633439762093 1.0 17.99046018590945 -5.470592256318219 3.085631479324867 0.9428015183369469 0.8018846710560283 0.5459059088431356 0.056309030897929685 0.18985367503942935 3.5854123018251998 0.016513985487904618 0.024757817510734415 3.383823823303849e-06 5.470592256318219 -0.14091684728091858 LS(ph)LTSDPEEGDPLALGPES(ph)PGEPQPPQLK ddPTM_KYSE-520_SHP099_60min_R1 2 LSLTSDPEEGDPLALGPESPGEPQPPQLK 29 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 2 LS(0.345)LT(0.345)S(0.31)DPEEGDPLALGPES(1)PGEPQPPQLK;LS(0.333)LT(0.333)S(0.333)DPEEGDPLALGPES(1)PGEPQPPQLK 109.09 0.00034449999999999997 298550000.0 287280.0 272280.0 271560.0 258040.0 258540.0 223500.0 200388.0 197743.0 229450.0 215802.0 True False 271344.0057215177 259199.26009938752 289065.1921113628 282564.04401744535 278885.6271086253 222105.05359688454 220645.1746384154 197057.07568656313 187787.6639637994 213890.1621714157 1.2686137733817668 1.211833482512675 1.3514655801686681 1.3210707830077435 1.3038730920458184 1.0384070559490495 1.0315816884630071 0.9213003238953916 0.8779630725292673 1.0 17.706510602040712 -6.432530274163017 2.1051454227677513 0.9454885263208638 1.2952553564228382 0.8999380030612767 0.05327839168955305 0.09894472411815666 0.8677603182951287 0.023984902486764322 0.019640602832696367 3.693768946272605e-07 6.432530274163017 0.3497668301019744 LS(ph)LTSDPEEGDPLALGPESPGEPQPPQLK ddPTM_KYSE-520_SHP099_60min_R1 1 LSLTSDPEEGDPLALGPESPGEPQPPQLK 29 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 LS(0.333)LT(0.333)S(0.333)DPEEGDPLALGPESPGEPQPPQLK 95.794 0.0021376999999999998 163560000.0 66563.0 86402.0 54243.0 55389.0 50924.0 71156.0 49089.0 63944.0 81086.0 65657.0 True False 62870.61769994926 82251.11822795404 57739.59057186865 60653.15390668994 54931.42908207488 70711.88901002193 54051.39518247188 63722.193188641795 66362.82641171775 65075.330060372995 0.9661206119372989 1.2639370119467144 0.8872731113050263 0.9320452750745878 0.8441206372847098 1.0866159102753634 0.8305973267031643 0.9792066076272553 1.0197847072024113 1.0 15.989823103508929 -4.782475725009158 24.999946887797577 0.9432684336816968 1.115028973428636 0.3071186201848516 0.10052221255964493 225.0730969354792 267480.6108294937 0.02464429749404209 0.051381353213370035 1.650153234440456e-05 4.782475725009158 0.17176053974693928 LS(ph)MQELR ddPTM_KYSE-520_SHP099_60min_R1 1 LSMQELR 7 0 O14777;I3L4G3 O14777 NDC80 Kinetochore protein NDC80 homolog 1 LS(1)MQELR 88.056 0.0184 0.0 200270.0 166220.0 144870.0 166770.0 168660.0 182220.0 157190.0 190680.0 173780.0 175390.0 True False 189160.6238716528 158234.54169869336 154208.55200019557 182619.77065877133 181932.5824558705 181082.6973889231 173080.29922656302 190018.57558504678 142225.93263730247 173836.18105135506 1.0881545068904301 0.9102509083074447 0.8870912319147126 1.0505279715321254 1.0465748922666656 1.041685892394445 0.9956517577628518 1.0930899104882608 0.8181607061149473 1.0 17.407368860334234 -4.219253779439706 22.157791249946232 0.9888663057783587 1.0881558768630526 0.1268137879770913 0.08162956759120864 14117.276573379955 7414340.6123038875 0.020337820095393276 6.142571192737051 6.035958158399704e-05 4.219253779439706 0.09928957108469394 LS(ph)NAAAELAIK ddPTM_KYSE-520_SHP099_60min_R1 1 LSNAAAELAIK 11 0 A0A494BZV2;H0Y2S9 A0A494BZV2 MPRIP 1 LS(1)NAAAELAIK 125.67 0.00018567 90359000.0 150090.0 123830.0 114830.0 113160.0 109940.0 113780.0 130860.0 120040.0 153490.0 121750.0 True False 141764.20850300294 117881.02092738061 122232.12553449601 123914.6923772053 118591.65252696796 113069.85681545189 144088.6058705264 119623.60925754659 125620.0851680259 120671.38972006679 1.174795523875769 0.9768763018379149 1.01293376846036 1.0268771468088858 0.9827652834866376 0.9370063366117776 1.1940577315367198 0.9913170763596008 1.0410096830693596 1.0 16.880724138916694 -9.96796715064037 13.834068980121666 1.0000325126498248 1.0333750059189064 0.017310934926722754 0.07946464267560524 0.0 0.0 0.074486262553651 0.01806557224507015 1.076546638864952e-10 9.96796715064037 0.03334249326908156 LS(ph)NIFVIGK ddPTM_KYSE-520_SHP099_60min_R1 3 LSNIFVIGK 9 0 P62701 P62701 RPS4X 40S ribosomal protein S4, X isoform 1 LS(1)NIFVIGK;LS(1)NIFVIGK;LS(1)NIFVIGK 138.89 0.00043713 414460500.0 738832.0 786763.0 723443.0 797470.0 838323.0 819360.0 782195.0 798116.0 830839.0 796081.0 True False 697847.5161349233 748965.7245246615 770077.2933297259 873261.3090319022 904294.2506946085 814246.0703138396 861266.9040875466 795347.5218776752 679979.5813467809 789028.341681647 0.8844390996749356 0.9492253762753307 0.9759817900691236 1.1067553127061702 1.1460858918797474 1.0319604851942914 1.0915538246090608 1.0080088126905051 0.8617936079425845 1.0 19.589717596816488 -4.801492600339005 2.333355534911441 1.0417223936962474 0.9019765738314877 0.2888255831381067 0.07424224862684631 0.3897827003898658 4.156817079635192 0.021863506748491676 0.07045752508575974 1.5794555188238144e-05 4.801492600339005 -0.13974581986475976 LS(ph)PATPTSEGPK ddPTM_KYSE-520_SHP099_60min_R1 1 LSPATPTSEGPK 12 0 Q8N1G0;F8WCX2;Q8N1G0-2 Q8N1G0 ZNF687 Zinc finger protein 687 1 LS(1)PATPTSEGPK 184.1 7.2893e-08 0.0 425240.0 389740.0 339300.0 342770.0 341900.0 392970.0 335080.0 424160.0 446810.0 379680.0 True False 401651.0895050758 371016.3053883333 361171.82089919515 375346.75774244167 368805.5848551057 390517.3284651799 368953.15646565723 422688.68795968813 365680.56716350035 376316.3305865699 1.0673230387823358 0.9859160372073797 0.959755906251082 0.9974235164266803 0.9800414036782378 1.0377368631769839 0.9804335514500909 1.1232270661781723 0.9717371728022235 1.0 18.521586372253573 -6.566447945032729 1.829770604919623 1.0314484825223387 0.9961326128822643 0.031847151277623276 0.04767096705617863 0.8810259139431103 5.975801787462871 0.021844008522023062 0.015974479653712622 2.7136388921071193e-07 6.566447945032729 -0.03531586964007438 LS(ph)PCLHR ddPTM_KYSE-520_SHP099_60min_R1 1 LSPCLHR 7 0 D6RFX7;Q9C073;K7ENS5;D6RJ87 D6RFX7 FAM117A Protein FAM117A 1 LS(1)PCLHR 133.23 0.0094085 0.0 68237.0 62629.0 59924.0 63876.0 63198.0 68178.0 61406.0 66944.0 73184.0 65668.0 True False 64451.757582912986 59620.20883195444 63786.79692178999 69946.75583498029 68171.32305256788 67752.47581265497 67613.51774480766 66711.786888847 59895.63041850806 65086.23260893092 0.9902517782857373 0.9160187407094377 0.9800351681906593 1.0746782081435517 1.0474000463688482 1.0409647800594652 1.0388297960194113 1.024975393639438 0.9202503819569574 1.0 15.990064788572504 -5.008411396532066 24.050537538315506 1.0249299740557496 0.9518581656212773 0.30124748600966134 0.042152067021206684 265.7798391947563 759952.2657674312 0.011308411811440842 0.021862719708091494 9.808183975620835e-06 5.008411396532066 -0.07307180843447225 LS(ph)PCVPAKPPLAEFEEGLLDR ddPTM_KYSE-520_SHP099_60min_R1 2 LSPCVPAKPPLAEFEEGLLDR 21 1 Q15742 Q15742 NAB2 NGFI-A-binding protein 2 1 LS(1)PCVPAKPPLAEFEEGLLDR;LS(1)PCVPAKPPLAEFEEGLLDR 83.881 0.0024245 68698000.0 68052.0 54389.0 37266.0 42145.0 49372.0 56006.0 49013.0 59964.0 65080.0 51796.0 True False 64277.019901701235 51776.070800446614 39668.22598770818 46150.448128643686 53257.29551174694 55656.445779629124 53967.7123607833 59755.99887970278 53263.11253329286 51337.1277366782 1.2520571900982693 1.0085502068993784 0.7727005334458343 0.8989682548147536 1.0374031010250084 1.0841363401767596 1.05124136740953 1.1639918615277274 1.0375164112510062 1.0 15.647714960309505 -5.974198992593557 9.863972587511167 1.074887145850402 0.9695564743623329 0.09539793863888302 0.1185966548034225 0.7411224191999379 270.52934378931764 0.03923222662744877 0.04427787682062629 1.0612092025082776e-06 5.974198992593557 -0.10533067148806896 LS(ph)PDFAEELR ddPTM_KYSE-520_SHP099_60min_R1 2 LSPDFAEELR 10 0 A0A0G2JNZ2;A0A669KB89;Q14160;A0A0G2JMS7;Q14160-2;H0YCG0 A0A0G2JNZ2 SCRIB Protein scribble homolog 1 LS(1)PDFAEELR;LS(1)PDFAEELR 178.1 2.0614e-05 181783000.0 175640.0 174659.0 131959.0 209810.0 199041.0 175244.0 182872.0 250800.0 254090.0 176480.0 True False 165896.89907034067 166268.11947149626 140465.2882818653 229750.27931832342 214704.3943116263 174150.23719253863 201358.48641872907 249930.03333715993 207953.66108765206 174916.52449936228 0.9484346864606581 0.9505569582255361 0.8030418434387394 1.313485275195718 1.2274677588417844 0.9956191257000053 1.151169033314878 1.4288531861269125 1.1888737309573643 1.0 17.416307062651008 -5.259740695206628 24.99944560394408 1.1966463945097954 0.9056657373950342 0.5099277050143984 0.12810454793832118 125.8309724192301 1851830.63207339 0.03656313659176226 0.059352997899617094 5.4986908694359105e-06 5.259740695206628 -0.2909806571147612 LS(ph)PENNQVLTK ddPTM_KYSE-520_SHP099_60min_R1 12 LSPENNQVLTK 11 0 Q16514-2;Q16514 Q16514-2 TAF12 Transcription initiation factor TFIID subunit 12 1 LS(1)PENNQVLTK;LS(0.979)PENNQVLT(0.021)K;LS(1)PENNQVLTK;LS(1)PENNQVLTK;LS(1)PENNQVLTK;LS(1)PENNQVLTK;LS(1)PENNQVLTK;LS(1)PENNQVLTK;LS(1)PENNQVLTK;LS(1)PENNQVLTK;LS(1)PENNQVLTK;LS(1)PENNQVLTK 236.22 3.898e-14 19971380000.0 18662610.0 16571940.0 14225420.0 14512800.0 15525160.0 17150680.0 16262100.0 17714740.0 18408540.0 16375890.0 True False 17627357.820309304 15775799.127410952 15142413.334676756 15892092.148567569 16746901.765923051 17043636.244398296 17906031.770801518 17653291.7015914 15066013.177529568 16230812.35484964 1.0860428569394671 0.9719660841681326 0.9329424186308408 0.9791310379987934 1.0317968934511899 1.0500790639296491 1.103212296422818 1.0876406747636838 0.928235312450517 1.0 23.952231873030485 -5.849736329071558 4.805579724575001 1.0432497156992375 0.9868855819685061 0.09221248274717009 0.05811060759039179 0.3984573171986229 15.962786784102292 0.018713420301394366 0.021584569566636003 1.41339539150908e-06 5.849736329071558 -0.05636413373073146 LS(ph)PEPWTPETGLVTDAFK ddPTM_KYSE-520_SHP099_60min_R1 1 LSPEPWTPETGLVTDAFK 18 0 O95573;O60488-2;O60488 O95573 ACSL3;ACSL4 Long-chain-fatty-acid--CoA ligase 3;Long-chain-fatty-acid--CoA ligase 4 1 LS(1)PEPWTPETGLVTDAFK 126.77 3.8816e-05 11270000.0 25559.0 22943.0 22950.0 20187.0 22478.0 24955.0 20578.0 23836.0 31222.0 25574.0 True False 24141.19131939669 21840.783841854914 24429.39372129832 22105.56641055715 24246.890717674956 24799.24658841276 22658.225061926405 23753.318479364225 25552.871842570214 25347.434256270913 0.9524116356441165 0.8616565929725822 0.9637817174830832 0.8721027219979185 0.9565816592137453 0.9783730510032772 0.8939060590055894 0.9371093831119295 1.0081048671128705 1.0 14.629552100226165 -7.717542920187609 4.974302388505087 1.004911166323085 0.9251955803539886 0.40671251578917167 0.03736183674068045 0.1739096054175257 9.40648868595874 0.028007998258715642 0.009271099065015847 1.916271673260268e-08 7.717542920187609 -0.07971558596909634 LS(ph)PEVAPPAHR ddPTM_KYSE-520_SHP099_60min_R1 7 LSPEVAPPAHR 11 0 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 LS(1)PEVAPPAHR;LS(1)PEVAPPAHR;LS(1)PEVAPPAHR;LS(1)PEVAPPAHR;LS(1)PEVAPPAHR;LS(1)PEVAPPAHR;LS(1)PEVAPPAHR 178.65 5.1672e-06 4499990000.0 3890690.0 3515190.0 3123050.0 3440490.0 3569580.0 3371180.0 3430650.0 3779500.0 3861970.0 3503770.0 True False 3674865.6698017726 3346314.995992238 3324366.8000566727 3767473.1351789646 3850485.6378680584 3350139.215144269 3777453.5819174745 3766389.7966419333 3160733.600341137 3472729.32369181 1.058206766859409 0.9635979899622057 0.9572778325615613 1.0848738222919765 1.108777931985399 0.964699204250904 1.0877477712261536 1.0845618663529863 0.9101583526184543 1.0 21.72763853587899 -5.253106592625187 24.7688298424571 1.0403434845227286 0.9900845797475395 0.07397450146413265 0.06448638298340903 1301.1786639522463 3867684.1528708297 0.017395300054041964 0.029564685095775884 5.583331414195756e-06 5.253106592625187 -0.05025890477518913 LS(ph)PEVK ddPTM_KYSE-520_SHP099_60min_R1 1 LSPEVK 6 0 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 LS(1)PEVK 84.49799999999999 0.046426 0.0 1131000.0 961490.0 796530.0 1079400.0 1178900.0 1066700.0 1009600.0 1127800.0 1161100.0 1066600.0 True False 1068261.175407396 915298.577174086 847875.5982930609 1181985.8514665556 1271672.7229765558 1060042.3296277248 1111660.2207464732 1123887.925030498 950273.5089490847 1057150.7538022443 1.0105097797690545 0.8658165109205476 0.8020384937943 1.1180863724642092 1.2029246712474473 1.0027352539976728 1.0515626241084113 1.0631292850033174 0.8989006587104486 1.0 20.011749694629984 -5.266834387648095 24.998762212799114 1.0555153522745753 0.8900910853371929 0.38923076149707625 0.0888579099056465 439.9601922081498 2038637.587647622 0.025777341274326994 0.039493974799067175 5.409605716467247e-06 5.266834387648095 -0.16542426693738232 LS(ph)PGESAYQK ddPTM_KYSE-520_SHP099_60min_R1 7 LSPGESAYQK 10 0 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 LS(1)PGESAYQK;LS(1)PGESAYQK;LS(1)PGESAYQK;LS(1)PGESAYQK;LS(1)PGESAYQK;LS(1)PGESAYQK;LS(1)PGESAYQK 267.07 7.1058e-20 19028000000.0 18829970.0 17728510.0 15892090.0 16412190.0 16837500.0 16491190.0 16130630.0 18530600.0 21720500.0 17898700.0 True False 17785434.027485434 16876805.76856396 16916519.54964303 17971999.60309514 18162515.457729857 16388262.36611366 17761271.500177972 18466321.673674572 17776604.729246896 17740131.442977905 1.0025536780633866 0.9513348772420919 0.9535735179876084 1.0130702616754859 1.0238095200201656 0.9237959943414423 1.001191651666619 1.0409348844472128 1.002055976100641 1.0 24.080513363333594 -6.993435260819961 24.99126399856965 1.0171099202197142 0.97796622433245 0.22719063298266262 0.030436967966850473 230.89079195599635 878973.2296366341 0.013050013633212768 0.008775257177498975 1.0152306931652753e-07 6.993435260819961 -0.039143695887264296 LS(ph)PGKETR ddPTM_KYSE-520_SHP099_60min_R1 8 LSPGKETR 8 1 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7 P28290-3 SSFA2 Sperm-specific antigen 2 1 LS(1)PGKETR;LS(1)PGKETR;LS(1)PGKETR;LS(1)PGKETR;LS(0.933)PGKET(0.067)R;LS(1)PGKETR;LS(1)PGKETR;LS(1)PGKETR 164.04 0.00012395 21039780000.0 34765400.0 33767900.0 32410700.0 27451310.0 30092400.0 30369260.0 26869570.0 27793210.0 40829500.0 27551200.0 True False 32836893.95889331 32145639.39734873 34499945.58095352 30060274.248862702 32460500.67766531 30179714.183434978 29585808.357332367 27696801.841493975 33415892.027936094 27307117.802509226 1.2025031054678337 1.1771890255805355 1.263404868667002 1.1008219346422745 1.1887193995509313 1.1051958834213471 1.083446761804124 1.0142704199616754 1.2237062977355133 1.0 24.70277371352311 -6.011123499516426 0.9268179433178557 1.0782074316006443 1.2073604620465304 0.3752499557743141 0.06664118862798202 0.6110460281887437 1.1439507766821473 0.03461660280939328 0.041494289977982816 9.747124211398636e-07 6.011123499516426 0.1291530304458861 LS(ph)PGTDSSSNLGGVK ddPTM_KYSE-520_SHP099_60min_R1 7 LSPGTDSSSNLGGVK 15 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;A0A1W2PRR3;I3L233;A0A1W2PPV8 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 LS(1)PGTDSSSNLGGVK;LS(1)PGTDSSSNLGGVK;LS(0.999)PGT(0.001)DSSSNLGGVK;LS(1)PGTDSSSNLGGVK;LS(0.981)PGT(0.019)DSSSNLGGVK;LS(1)PGTDSSSNLGGVK;LS(0.898)PGT(0.101)DSSSNLGGVK 250.6 3.5731e-19 8238600000.0 8568360.0 8481510.0 7134390.0 6077720.0 6998760.0 8066690.0 6789500.0 8002470.0 9459220.0 8289830.0 True False 8093055.990197805 8074045.528593943 7594284.194827604 6655344.68146685 7549522.594502827 8016342.795523276 7475848.919134492 7974711.299360546 7741664.095531265 8216388.555590146 0.9849894434083901 0.9826757186526485 0.9242849389907097 0.8100085136478586 0.9188370953277756 0.9756528359493458 0.9098704216036841 0.9705859509205939 0.9422222480294101 1.0 22.97007297809422 -8.092956867234818 0.8003423329987168 0.998622726994376 0.9272499339017899 0.14720513097838628 0.04897055294074168 1.6038347826384687 2.2863082491325333 0.05219324152767328 0.019069675644422048 8.073152062803917e-09 8.092956867234818 -0.07137279309258615 LS(ph)PHKVQGR ddPTM_KYSE-520_SHP099_60min_R1 16 LSPHKVQGR 9 1 Q9GZP8;Q9GZP8-2;K7EQZ3 Q9GZP8 IMUP Immortalization up-regulated protein 1 LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR;LS(1)PHKVQGR 103.91 0.0026524 546802550000.0 38651520.0 36722840.0 34273520.0 31786570.0 32896990.0 32227550.0 28752190.0 28710330.0 39012030.0 29714890.0 True False 36507443.135705136 34958619.64429341 36482845.938770935 34807556.05581923 35485795.954731114 32026405.906247277 31658741.959533025 28610740.566271413 31928428.765245806 29451639.19243463 1.2395725377853657 1.186983835292719 1.2387373653600389 1.1818546271190364 1.204883562604777 1.087423545324229 1.0749398956260927 0.9714481553753646 1.0840968326627944 1.0 24.811844596704788 -6.4530413116268095 1.4546174273910055 1.0215711551985929 1.2154837029971957 0.8619949580871662 0.03410300413542197 0.13115607176951413 0.5601965448458668 0.015698750698600248 0.012162074845968571 3.523373538733905e-07 6.4530413116268095 0.19391254779860279 LS(ph)PIPEEVPK ddPTM_KYSE-520_SHP099_60min_R1 12 LSPIPEEVPK 10 0 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 LS(1)PIPEEVPK;LS(1)PIPEEVPK;LS(1)PIPEEVPK;LS(1)PIPEEVPK;LS(1)PIPEEVPK;LS(1)PIPEEVPK;LS(1)PIPEEVPK;LS(1)PIPEEVPK;LS(1)PIPEEVPK;LS(1)PIPEEVPK;LS(1)PIPEEVPK;LS(1)PIPEEVPK 184.55 4.2983e-06 63398830000.0 59173180.0 56737250.0 45276770.0 43035800.0 49862170.0 53134420.0 50015420.0 54719700.0 63344280.0 50694840.0 True False 55890725.74659014 54011507.34565156 48195383.039593406 47125909.4928149 53786039.1020611 52802788.37556769 55071466.757059716 54529890.13237405 51842555.53135242 50245723.15758875 1.1123479220569006 1.0749473577333528 0.9591937385085545 0.9379088712687249 1.0704600455917141 1.050891201425424 1.096042872829906 1.0852643111802491 1.0317804635581704 1.0 25.58249746563886 LS(ph)PISHGNTIALFFR ddPTM_KYSE-520_SHP099_60min_R1 4 LSPISHGNTIALFFR 15 0 Q9BQ70 Q9BQ70 TCF25 Transcription factor 25 1 LS(0.999)PIS(0.001)HGNTIALFFR;LS(0.998)PIS(0.002)HGNTIALFFR;LS(0.991)PIS(0.009)HGNTIALFFR;LS(0.994)PIS(0.006)HGNTIALFFR 171.35 1.9166e-08 552470000.0 277607.0 362154.0 318918.0 336734.0 393063.0 391714.0 315621.0 267530.0 344721.0 252384.0 True False 262207.5863141656 344755.5782357639 339475.9645668421 368737.0981172316 423994.82187745627 389269.16762706946 347527.05084411864 266602.0008719713 282128.35610923887 250148.0741117808 1.0482094944972309 1.378206006422048 1.3571000527277473 1.4740753029042244 1.694975359626357 1.556154965451068 1.3892853346087455 1.065776747706792 1.1278454056103082 1.0 17.932422819511466 -7.232668943525916 4.80745264796854 1.0695763894438188 1.4313540041486135 0.5044995840382719 0.15839375928196278 0.17363922378300622 10.670654238083987 0.08827187712879743 0.04702470295189928 5.852360312123341e-08 7.232668943525916 0.36177761470479464 LS(ph)PLPVVSR ddPTM_KYSE-520_SHP099_60min_R1 7 LSPLPVVSR 9 0 O14686-3;O14686 O14686-3 KMT2D Histone-lysine N-methyltransferase 2D 1 LS(1)PLPVVSR;LS(1)PLPVVSR;LS(1)PLPVVSR;LS(1)PLPVVSR;LS(1)PLPVVSR;LS(1)PLPVVSR;LS(1)PLPVVSR 192.44 4.3104e-06 6342710000.0 4899820.0 3859646.0 3394065.0 3765337.0 3910962.0 3784517.0 3825926.0 4674170.0 4271090.0 4174323.0 True False 4628017.217050989 3674222.8127132435 3612851.8605960044 4123193.4963901513 4218732.459070172 3760896.4256076952 4212687.9375194805 4657956.395229478 3495567.721417054 4137341.7457941514 1.1185967950932838 0.8880636501561189 0.8732302242783494 0.9965803527304984 1.0196722239246394 0.9090127566645577 1.018211256491423 1.125833127022819 0.8448825202729511 1.0 21.9802726989058 LS(ph)PNLRKMPKEK ddPTM_KYSE-520_SHP099_60min_R1 1 LSPNLRKMPKEK 12 3 A0A087WWV9;Q9UI46 A0A087WWV9 DNAI1 Dynein intermediate chain 1, axonemal 1 LS(1)PNLRKMPKEK 46.001000000000005 0.06763200000000001 0.0 139110.0 138640.0 114080.0 99874.0 132690.0 150850.0 109000.0 130210.0 168070.0 161820.0 True False 131393.29099109 131979.52629711738 121433.77933445372 109365.99493178705 143131.9480971745 149908.48919503376 120018.78373748566 129758.33190124256 137552.72469991597 160386.4006940551 0.8192296255948104 0.8228847690701332 0.7571326422250387 0.681890699326859 0.8924194786951151 0.9346708233760512 0.748310225917641 0.8090357495381602 0.857633341135353 1.0 17.291192294016387 -5.790238943732332 24.999847515888522 0.860911293769122 0.7731020693789475 0.3120365664529089 0.07371591401991859 313.19173344240784 271868.7101146089 0.023647517643218596 0.026818383079561282 1.6209180418789872e-06 5.790238943732332 -0.08780922439017447 LS(ph)PPCK ddPTM_KYSE-520_SHP099_60min_R1 3 LSPPCK 6 0 A0A499FJN1;A0A499FIS5;Q9BUB5-2;Q9BUB5;Q7Z319 A0A499FJN1 MKNK1;DKFZp686E14208 MAP kinase-interacting serine/threonine-protein kinase 1 1 LS(1)PPCK;LS(1)PPCK;LS(1)PPCK 62.54600000000001 0.05354400000000001 2547460000.0 5772100.0 4967630.0 4451000.0 4883990.0 5149360.0 5087150.0 5238950.0 5301300.0 5592800.0 5103390.0 True False 5451910.106603921 4728977.598235347 4737918.581851806 5348162.941174857 5554585.336149414 5055399.209867523 5768554.193224769 5282911.02763272 4577288.503014755 5058177.934977342 1.0778407119496367 0.9349172091267149 0.9366848384452946 1.0573299338072444 1.098139568744589 0.9994506470223983 1.140441136586985 1.044429653433373 0.9049283283141875 1.0 22.27018635788606 -3.91718194128978 19.192038676633782 1.0187704924502279 3.37310363521655 0.06431466712704947 0.07120637109782568 873.778145035613 210916.58805900178 0.018008723118483522 3689.3134166054656 0.000121009107747549 3.91718194128978 2.354333142766322 LS(ph)PPLHMAPGAGEHHLAR ddPTM_KYSE-520_SHP099_60min_R1 2 LSPPLHMAPGAGEHHLAR 18 0 Q6ZN04 Q6ZN04 MEX3B RNA-binding protein MEX3B 1 LS(1)PPLHMAPGAGEHHLAR;LS(1)PPLHMAPGAGEHHLAR 189.11 3.0215e-12 2518170000.0 1310630.0 1081380.0 944870.0 1150310.0 1198580.0 1207810.0 1163670.0 1175310.0 1164050.0 1121460.0 True False 1237926.7412238694 1029428.8816155293 1005777.8320454541 1259635.1165466884 1292901.427012671 1200271.6097756287 1281305.1199247695 1171233.1239294151 952687.8633125324 1111524.7368826773 1.1137194703337798 0.9261412251630228 0.9048632015749867 1.1332497377245903 1.1631782758507678 1.0798424631932584 1.1527454832163693 1.0537175512748307 0.8571000101935561 1.0 20.08410862509425 -3.8561157182466563 19.10970424027744 1.0394108869678835 42.86219639057363 0.05009469724063742 0.10224078927184045 1720.782150239269 228778.46278929606 0.026415121970221993 3260.401410268827 0.0001392785644219142 3.8561157182466563 41.82278550360574 LS(ph)PQACSFTK ddPTM_KYSE-520_SHP099_60min_R1 1 LSPQACSFTK 10 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 LS(1)PQACSFTK 88.075 0.0055961000000000006 0.0 492500.0 467900.0 448620.0 522520.0 429550.0 455520.0 434180.0 480880.0 597930.0 511680.0 True False 465180.04322558997 445421.38166778104 477538.76301737886 572180.1436986332 463353.1411948247 452676.93071343494 478071.1515884538 479211.9395182359 489360.98458868783 507146.91328101675 0.9172490870861865 0.8782886575925332 0.9416181988132665 1.1282335132375747 0.9136467738650608 0.8925952595961099 0.942667970698164 0.9449173936955391 0.9649294351862229 1.0 18.95204421053996 -4.9893052795506785 20.352451854652728 0.9663325990309315 0.9008144282897564 0.17741642039340144 0.06111995925852686 44.16624977818312 84033.78085533378 0.016942188330371682 0.03513439803526223 1.0249312158802567e-05 4.9893052795506785 -0.06551817074117505 LS(ph)PSWNPK ddPTM_KYSE-520_SHP099_60min_R1 5 LSPSWNPK 8 0 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 LS(0.976)PS(0.024)WNPK;LS(1)PSWNPK;LS(0.992)PS(0.008)WNPK;LS(0.999)PS(0.001)WNPK;LS(0.999)PS(0.001)WNPK 197.79 0.0001056 3663250000.0 5978940.0 4919340.0 4769080.0 5207810.0 5521390.0 5420150.0 5627150.0 5958660.0 6222910.0 5623990.0 True False 5647276.279478602 4683007.522320115 5076502.527597799 5702758.696614826 5955891.98058828 5386320.833347437 6195997.23769167 5937990.799221706 5092986.410795226 5574165.823998009 1.0131159455583179 0.8401270558114253 0.91071968217062 1.023069437953065 1.0684813061977554 0.9663007889284783 1.1115559589233137 1.0652698514381023 0.9136768749987307 1.0 22.410324490657377 -5.268029721863361 8.214798937873224 1.027446230486014 0.9130767338654209 0.3226630826764262 0.06555563762346663 0.13462641447860385 92.68586192158932 0.017848218608423227 0.028101173160230492 5.394737012255844e-06 5.268029721863361 -0.11436949662059304 LS(ph)PTFPESIEHPLAR ddPTM_KYSE-520_SHP099_60min_R1 3 LSPTFPESIEHPLAR 15 0 M9T4I7;Q5U5Q3 M9T4I7 MEX3C RNA-binding E3 ubiquitin-protein ligase MEX3C 1 LS(0.998)PT(0.002)FPESIEHPLAR;LS(0.983)PT(0.017)FPESIEHPLAR;LS(0.995)PT(0.005)FPESIEHPLAR 254.53 8.745899999999999e-20 519610000.0 280854.0 303192.0 249665.0 481260.0 281537.0 284557.0 259829.0 277711.0 322807.0 240280.0 True False 265274.46875143115 288626.20121953014 265758.80537812377 526998.8057039053 303692.36017359403 282780.97421194013 286095.05100667133 276747.68535923486 264193.38610225386 238151.30613501102 1.1138904634058302 1.2119446494066435 1.1159241983223125 2.2128738836525335 1.2752076194846773 1.1874004757783188 1.2013163213326254 1.1620666283574488 1.1093509852617782 1.0 17.861518935586094 -5.996192538707636 24.998575983932156 1.15591071854334 1.4237405099801839 0.16329684294384172 0.29797886348019864 234.22502669243732 1537824.1793884335 0.09748369798504442 0.11005496295119123 1.0088055463425435e-06 5.996192538707636 0.26782979143684393 LS(ph)PTPSMQDGLDLPSETDLR ddPTM_KYSE-520_SHP099_60min_R1 4 LSPTPSMQDGLDLPSETDLR 20 0 Q9UK58;Q9UK58-6;Q9UK58-5;Q9UK58-4 Q9UK58 CCNL1 Cyclin-L1 1 LS(0.789)PT(0.211)PSMQDGLDLPSETDLR;LS(0.991)PT(0.009)PSMQDGLDLPSETDLR;LS(0.831)PT(0.169)PSMQDGLDLPSETDLR;LS(0.993)PT(0.007)PSMQDGLDLPSETDLR 269.0 1.9048999999999998e-35 594130000.0 768400.0 684400.0 521161.0 467393.0 543952.0 652270.0 584603.0 572602.0 689660.0 708000.0 True False 725775.3202325753 651520.3966946566 554755.8719470823 511813.8901931701 586757.9277364849 648198.9409827286 643700.376415462 570615.7773083118 564435.1289138107 701727.6708156655 1.0342692050164668 0.9284519106070741 0.7905572133164595 0.7293625596925004 0.8361618789443724 0.9237186560268931 0.9173079574690928 0.8131584388642484 0.8043506795987246 1.0 19.42055172691735 -4.4662273827469905 3.537268311307015 0.8453199171019486 1.0274912372272187 0.3644335284573256 0.07419004432285269 0.263388770647672 6.153885919323921 0.019754859208757903 0.0933317089977316 3.418004398428092e-05 4.4662273827469905 0.18217132012527004 LS(ph)PTQLR ddPTM_KYSE-520_SHP099_60min_R1 2 LSPTQLR 7 0 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 LS(0.5)PT(0.5)QLR;LS(0.5)PT(0.5)QLR 91.265 0.0072075 1248450000.0 1468680.0 1235640.0 1191300.0 1145670.0 1224250.0 1381450.0 1258440.0 1417360.0 1373850.0 1415470.0 True False 1387209.3926590048 1176277.9996665488 1268093.104147393 1254554.1323417549 1320591.5099703493 1372827.8581271418 1385655.3963908395 1412443.5089743102 1124393.4719401416 1402930.0370189962 0.9887944202881311 0.838443805912056 0.9038890541126982 0.8942385573321129 0.94130959857157 0.9785433499194182 0.9876867411971144 1.006781144963956 0.8014608300277749 1.0 20.420011634046435 -5.884186445922298 4.349350104793223 0.957610340519635 0.9014415682001087 0.10965756444226471 0.06452349929449364 0.44146250337580817 14.66276380203326 0.01996655711361712 0.02293192780905191 1.3056102593906278e-06 5.884186445922298 -0.05616877231952633 LS(ph)PTSLVHPVMSTLPELSCK ddPTM_KYSE-520_SHP099_60min_R1 3 LSPTSLVHPVMSTLPELSCK 20 0 C9JRJ5;Q9UGP4 C9JRJ5 LIMD1 LIM domain-containing protein 1 1 LS(0.974)PT(0.013)S(0.013)LVHPVMSTLPELSCK;LS(0.937)PT(0.032)S(0.032)LVHPVMSTLPELSCK;LS(0.586)PT(0.207)S(0.207)LVHPVMSTLPELSCK 204.12 8.0266e-14 853444000.0 356918.0 489206.0 430494.0 727331.0 412054.0 504588.0 435975.0 485874.0 550853.0 427836.0 True False 337119.0470416063 465703.8094468239 458244.3320547537 796456.3195599607 444480.3055334473 501438.67912458454 480047.6077059656 484188.6164978444 450831.981074093 424045.70589137106 0.7950063928438105 1.0982396543030304 1.0806484435244896 1.8782322483038918 1.0481896157847452 1.1825109231339308 1.132065720832793 1.1418311983139862 1.0631683679626363 1.0 18.693860248916394 -7.702516808842983 1.0779692645715344 1.0032379110959797 1.1959779217411286 0.04553757411014925 0.2594097757080872 1.6949414638694005 3.9685513902602225 0.25298082053750487 0.08625759573741441 1.98373287736744e-08 7.702516808842983 0.1927400106451489 LS(ph)PVKGEFHQEFQPEPSLLGDSTNSGEER ddPTM_KYSE-520_SHP099_60min_R1 2 LSPVKGEFHQEFQPEPSLLGDSTNSGEER 29 1 Q9Y2L9-2;Q9Y2L9;Q9Y2L9-3 Q9Y2L9-2 LRCH1 Leucine-rich repeat and calponin homology domain-containing protein 1 1 LS(1)PVKGEFHQEFQPEPSLLGDSTNSGEER;LS(1)PVKGEFHQEFQPEPSLLGDSTNSGEER 153.01 4.0720999999999995e-07 882030000.0 600300.0 519240.0 486970.0 599380.0 568360.0 508110.0 567130.0 629660.0 640620.0 516500.0 True False 567000.1623316176 494294.93100487016 518360.8653795492 656344.8949898313 613086.698473962 504938.6970161652 624461.0350554156 627475.8564237492 524299.5567160128 511924.21183091955 1.1075861411276415 0.9655627133497017 1.0125734501316292 1.2821134062840762 1.1976122330319763 0.9863543965037903 1.2198310230766447 1.2257202178024635 1.02417417383099 1.0 18.96557071569941 LS(ph)PVPVPR ddPTM_KYSE-520_SHP099_60min_R1 2 LSPVPVPR 8 0 Q9UKM9-2;Q9UKM9;Q5QPM0;Q5QPM1;Q5QPL9 Q9UKM9-2 RALY RNA-binding protein Raly 1 LS(1)PVPVPR;LS(1)PVPVPR 105.52 0.001779 1602280000.0 2874800.0 2398100.0 2038960.0 2259000.0 2365200.0 2412000.0 2288800.0 2365600.0 2795500.0 2489900.0 True False 2715329.1132282764 2282891.676378512 2170394.624051347 2473694.6808068836 2551327.783852869 2396945.8133140276 2520174.240535389 2357394.2857351922 2287907.668820227 2467841.4231128893 1.1002850863096425 0.9250560651903292 0.8794708621567959 1.0023718127263668 1.0338297104336112 0.9712722182491632 1.0212059076942182 0.9552454479678921 0.9270886076360217 1.0 21.234818263066444 -4.249017613948901 24.393609652306253 0.969063058721335 1.100285201413441 0.4281951897405969 0.04571783478478006 1530.2027338033406 3004905.8054791098 0.012260158471981798 0.2059535357270347 5.636147964898149e-05 4.249017613948901 0.13122214269210597 LS(ph)RGS(ph)IDREDGSLQGPIGNQHIYQPVGKPDPAAPPK ddPTM_KYSE-520_SHP099_60min_R1 3 LSRGSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK 36 3 E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397-7;Q05397;B4DWJ1;Q05397-6 E9PEI4 PTK2 Focal adhesion kinase 1 2 LS(0.997)RGS(0.997)IDREDGS(0.005)LQGPIGNQHIYQPVGKPDPAAPPK;LS(0.706)RGS(0.838)IDREDGS(0.456)LQGPIGNQHIYQPVGKPDPAAPPK;LS(0.991)RGS(0.992)IDREDGS(0.014)LQGPIGNQHIY(0.002)QPVGKPDPAAPPK 124.62 0.00016412 6137160000.0 1457510.0 1278850.0 1221590.0 1485910.0 1470470.0 1422880.0 1406730.0 1622370.0 1709770.0 1483500.0 True False 1376659.0148258486 1217412.1264070147 1300335.6460131065 1627130.4396448678 1586187.6231701886 1413999.2781294626 1548935.996761774 1616742.377134003 1399318.8677942245 1470357.3441455362 0.9362751308770194 0.8279702422369205 0.8843670902115065 1.1066224453011704 1.0787769581903672 0.9616704971478721 1.0534418744729717 1.099557453547821 0.9516862505334756 1.0 20.48773538831462 -5.242714127808222 22.883001612185826 1.039529706940004 0.8773806609141711 0.6116354397854031 0.05580192517529699 171.64218957611553 209751.93673181027 0.014933598824608393 0.025785210409207584 5.718549334882588e-06 5.242714127808222 -0.1621490460258329 LS(ph)RGSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK ddPTM_KYSE-520_SHP099_60min_R1 2 LSRGSIDREDGSLQGPIGNQHIYQPVGKPDPAAPPK 36 3 E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397-7;Q05397;B4DWJ1;Q05397-6 E9PEI4 PTK2 Focal adhesion kinase 1 1 LS(0.5)RGS(0.5)IDREDGS(0.001)LQGPIGNQHIYQPVGKPDPAAPPK;LS(0.485)RGS(0.485)IDREDGS(0.03)LQGPIGNQHIYQPVGKPDPAAPPK 136.69 9.752200000000001e-07 1747410000.0 666910.0 690810.0 690600.0 653870.0 595470.0 604530.0 498990.0 597780.0 909200.0 545360.0 True False 629915.1728478759 657622.4506730498 735117.1809990676 716013.6082068167 642330.1012391621 600756.9040309824 549432.778873101 595706.4407029011 744112.1990668398 540528.5346836598 1.1653689535863798 1.2166285560815366 1.3599969915173662 1.3246545968675978 1.1883370812515586 1.1114249581339324 1.0164732176343887 1.1020813934486062 1.376638144556653 1.0 19.044011254764886 -5.99338385731689 4.492646729030476 1.122934686271659 1.2695228713572526 0.2864241753432216 0.1078983841001314 0.27248833975894887 13.972416425239045 0.036241112142063776 0.0394240971881848 1.0153508639359549e-06 5.99338385731689 0.14658818508559368 LS(ph)S(ph)GFDDIDLPSAVK ddPTM_KYSE-520_SHP099_60min_R1 11 LSSGFDDIDLPSAVK 15 0 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 2 LS(1)S(1)GFDDIDLPSAVK;LS(1)S(1)GFDDIDLPSAVK;LS(1)S(1)GFDDIDLPSAVK;LS(1)S(1)GFDDIDLPSAVK;LS(1)S(1)GFDDIDLPSAVK;LS(1)S(1)GFDDIDLPSAVK;LS(1)S(1)GFDDIDLPSAVK;LS(1)S(1)GFDDIDLPSAVK;LS(1)S(1)GFDDIDLPSAVK;LS(1)S(1)GFDDIDLPSAVK;LS(1)S(1)GFDDIDLPSAVK 283.07 6.3842e-33 1905120000.0 3921243.0 3295713.0 3050725.0 3084530.0 3470740.0 3379490.0 3836753.0 4146349.0 4093401.0 4227752.0 True False 3703723.833985878 3137382.000513937 3247379.6148325857 3377682.8038022416 3743867.4921907266 3358397.3493518373 4224609.436340815 4131966.28308413 3350142.564641881 4190297.406421283 0.8838808978833409 0.7487253758423351 0.7749759264953953 0.8060723323901122 0.8934610432313373 0.8014699253101635 1.0081884474039844 0.9860794789296422 0.7994999494565864 1.0 21.998621212184897 -6.396464532736264 1.4424325960499786 0.9426081667812237 0.8027148863293566 0.3844632996616444 0.07347430623073074 0.4226036451432147 1.769707101276628 0.03546561892045644 0.028759011189057715 4.013612746518558e-07 6.396464532736264 -0.1398932804518671 LS(ph)S(ph)SDSIGPDVTDILSDIAEEASK ddPTM_KYSE-520_SHP099_60min_R1 1 LSSSDSIGPDVTDILSDIAEEASK 24 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 2 LS(0.501)S(0.534)S(0.53)DS(0.432)IGPDVT(0.003)DILS(0.001)DIAEEASK 72.425 0.011802 69651000.0 10561.0 10796.0 9458.7 11880.0 10225.0 12543.0 11134.0 9456.5 15709.0 9972.1 True False 9975.160277168443 10277.343954873624 10068.422936455101 13009.071628147758 11029.649327708254 12464.714484410386 12259.533377368489 9423.697608663695 12856.64159166408 9883.754952176407 1.0092480363418874 1.0398218090798121 1.0186839905655523 1.31620742228976 1.115937149502024 1.2611314773304503 1.2403720485470893 0.9534531819395818 1.3007851422735892 1.0 13.27084352705052 -5.202497081212864 24.97088620250909 1.1722731747172246 1.0243080945544072 0.2573445883229679 0.11445468883791655 345.90930099566543 146543.469312763 0.02958875625514175 0.051249212670069 6.273399121681912e-06 5.202497081212864 -0.1479650801628174 LS(ph)SDLTR ddPTM_KYSE-520_SHP099_60min_R1 1 LSSDLTR 7 0 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 LS(0.965)S(0.034)DLTR 94.69200000000001 0.014987 0.0 398810.0 359320.0 362480.0 359010.0 452830.0 485870.0 538460.0 655210.0 602550.0 548820.0 True False 376687.21429197484 342057.72784968384 385846.04078850604 393130.20245970786 488465.144749744 482837.5051056741 592892.791663179 652937.2294371634 493142.10904941015 543957.8817754992 0.6924933472099962 0.6288312740927559 0.7093307289327069 0.7227217687820165 0.8979833937792668 0.8876376669636151 1.0899608435269923 1.2003451945690198 0.9065814203110277 1.0 19.053135423511687 -6.042917943865719 1.1507244198600863 1.061173846625834 0.6636430191576353 0.7929780470173675 0.08061158587095034 0.19764558398894597 0.5504031675071595 0.03781928664651759 0.041870168059139214 9.059037472990965e-07 6.042917943865719 -0.3975308274681987 LS(ph)SDSFAR ddPTM_KYSE-520_SHP099_60min_R1 5 LSSDSFAR 8 0 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 LS(0.962)S(0.025)DS(0.013)FAR;LS(0.701)S(0.298)DS(0.002)FAR;LS(0.859)S(0.14)DS(0.001)FAR;LS(0.868)S(0.132)DSFAR;LS(0.634)S(0.353)DS(0.012)FAR 201.18 2.195e-06 2415280000.0 3508350.0 3302190.0 2965710.0 3616850.0 3640310.0 3557280.0 3369060.0 3907020.0 4233700.0 3297420.0 True False 3313734.831777662 3143547.835711761 3156884.411903777 3960594.3365543936 3926781.6864694 3535077.696013979 3709637.4636570057 3893467.4595253253 3464966.80289186 3268207.4241539394 1.0139303911028563 0.9618568920929338 0.9659375927527057 1.2118552535201148 1.2015093220363606 1.0816564670552165 1.1350679385404499 1.191315897133809 1.0602040670013033 1.0 21.640068119607577 -5.246314928724472 24.649631987540392 1.135599018999217 0.9787031296751276 0.5104015476650916 0.06475557674781465 496.71886286585055 809544.4428435324 0.017092379280449307 0.02945401316847046 5.671331995157448e-06 5.246314928724472 -0.15689588932408927 LS(ph)SGFDDIDLPSAVK ddPTM_KYSE-520_SHP099_60min_R1 2 LSSGFDDIDLPSAVK 15 0 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 LS(0.625)S(0.375)GFDDIDLPSAVK;LS(0.992)S(0.008)GFDDIDLPSAVK 283.1 6.0642999999999996e-33 481350000.0 722920.0 630840.0 609300.0 493220.0 552030.0 561820.0 584640.0 629530.0 768600.0 681500.0 True False 682818.186494709 600533.499489855 648576.4529144692 540095.4805079999 595471.6203789526 558313.4729834519 643741.1167365473 627346.3073634062 629041.6148292697 675462.4401989774 1.0108899412579695 0.8890701595679401 0.9601961771899735 0.7995936537180348 0.8815762134805584 0.8265647943636721 0.9530376204884381 0.9287656426589802 0.9312754897873625 1.0 19.36551602363956 -9.578863534288747 6.459451128585249 1.0000000000602471 0.905344509970531 0.16976733040335323 0.059886071011490044 4.54554171460779e-11 0.0 0.05843990687490996 0.014173759340971382 2.637159914352834e-10 9.578863534288747 -0.09465549008971619 LS(ph)SLPR ddPTM_KYSE-520_SHP099_60min_R1 2 LSSLPR 6 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ES05 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 LS(0.529)S(0.471)LPR;LS(0.5)S(0.5)LPR 96.25299999999999 0.013415999999999999 865580000.0 1157070.0 1101070.0 1137430.0 1070380.0 1040770.0 1334970.0 1337890.0 1525510.0 1674020.0 1528350.0 True False 1092885.020538139 1048172.9444602359 1210750.5577523457 1172108.5933785175 1122672.677828745 1326637.9570480224 1473136.977748117 1520218.361866712 1370060.1666100638 1514810.0080383066 0.7214667283281522 0.691950105226483 0.7992755205785043 0.7737660743979433 0.7411310143657004 0.875778447467502 0.9724895993101098 1.0035703182575413 0.9044435667442577 1.0 20.530705427280175 -6.466917835605774 2.4540752716199017 0.9712005794892836 0.7455696795512063 0.8896074283546958 0.03735864947722621 0.09483287085863774 1.132627475756321 0.015981589487947572 0.012951365365044747 3.412574681892066e-07 6.466917835605774 -0.22563089993807728 LS(ph)SLRAS(ph)TSK ddPTM_KYSE-520_SHP099_60min_R1 1 LSSLRASTSK 10 1 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 2 LS(0.716)S(0.284)LRAS(0.921)T(0.034)S(0.045)K 117.0 0.00037564 5355800000.0 7754900.0 5954100.0 5124400.0 5125800.0 5018900.0 5262400.0 5143700.0 5839400.0 6730600.0 4680800.0 True False 7324720.23799012 5668056.0987137 5454727.023329895 5612954.490872036 5413858.876365284 5229555.409611832 5663675.393674351 5819144.484326211 5508492.704618639 4639331.753607299 1.5788308806100804 1.2217397676522095 1.1757570514522027 1.2098627106172561 1.166947992489598 1.12722169643195 1.220795514196754 1.254306609955529 1.1873461518106625 1.0 22.14548558476626 -4.256051961611505 3.5148770891860712 1.1793035191667969 1.629363611294771 0.7746279178337079 0.0658772200359115 0.13271208324322073 2.8635025506283784 0.015834053999764345 0.15986932411636134 5.545593581617e-05 4.256051961611505 0.45006009212797404 LS(ph)SLRAS(ph)TSKSESSQK ddPTM_KYSE-520_SHP099_60min_R1 1 LSSLRASTSKSESSQK 16 2 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 2 LS(0.866)S(0.134)LRAS(0.74)T(0.141)S(0.101)KS(0.009)ES(0.007)S(0.002)QK 69.922 0.053065 0.0 729110.0 754910.0 700520.0 484720.0 514430.0 460070.0 338090.0 436020.0 982540.0 334650.0 True False 688664.8148552496 718642.9904569893 745676.640071629 530787.6430636181 554912.7142936883 457198.5324756983 372267.43664042646 434507.5483878331 804135.5038177877 331685.2613537601 2.0762599219648523 2.1666413138885843 2.2481452357219 1.6002750345228776 1.6730098649208418 1.37841075786624 1.1223514578882157 1.3099995658969228 2.4243932351282083 1.0 18.339455380912284 -5.362328978797077 3.42879688419906 1.4850200982869086 2.1668823858359123 0.4071950827479063 0.36718917478633617 0.2519087038007221 5.54471281274805 0.10742887838209193 0.16911433889840316 4.341812065807858e-06 5.362328978797077 0.6818622875490037 LS(ph)SLRASTS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 LSSLRASTSK 10 1 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 2 LS(0.467)S(0.533)LRAS(0.025)T(0.159)S(0.816)K 163.62 0.00021744 7848700000.0 11414000.0 9438500.0 7813600.0 8068800.0 7866500.0 7607400.0 7968700.0 9306400.0 10363000.0 6542800.0 True False 10780842.666755108 8985060.292522667 8317277.1582020195 8835656.326026825 8485548.7957376 7559919.394778245 8774253.963017449 9274118.270530093 8481340.42997103 6484835.882221375 1.6624696233734353 1.3855493732934445 1.2825732692795524 1.3625103991066894 1.3085217497949821 1.1657842283263153 1.3530417920170765 1.4301238210138407 1.3078727949342883 1.0 22.628638632636704 -11.452348092898204 0.04640358504323658 6.907371659061121e-31 2.1069173948992077 0.5232613665614445 0.11221425886824782 371.9109169006787 2.131545481899321 72.84880406005944 31.0498853124921 3.5290020212325885e-12 11.452348092898204 2.1069173948992077 LS(ph)SPVKR ddPTM_KYSE-520_SHP099_60min_R1 1 LSSPVKR 7 1 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 LS(0.5)S(0.5)PVKR 89.698 0.0068301 0.0 254150.0 227320.0 228650.0 241940.0 220540.0 232300.0 232170.0 275020.0 277110.0 299300.0 True False 240051.79286453564 216399.20598572347 243389.1448529353 264933.90485808655 237895.24329904915 230850.12953269004 255640.00936084424 274066.01981015044 226793.80937462792 296648.4348518763 0.809213077373556 0.7294803564150838 0.8204632698448767 0.8930905197270784 0.8019433624109157 0.7781943284074938 0.8617608567140813 0.9238748215442236 0.7645204987778599 1.0 18.17839464544509 -13.999999999959156 0.15006145498683482 1.629376934746619 0.7675389622457262 0.49307042240900234 0.055336847834044654 115.64165795973366 1.0292306802574562 21.720243538998616 0.28512003577263956 1.0000000000940463e-14 13.999999999959156 -0.8618379725008928 LS(ph)SPVLHR ddPTM_KYSE-520_SHP099_60min_R1 5 LSSPVLHR 8 0 Q16643;Q16643-2;Q16643-3;D6R9W4;D6RCR4 Q16643 DBN1 Drebrin 1 LS(0.5)S(0.5)PVLHR;LS(0.733)S(0.267)PVLHR;LS(0.5)S(0.5)PVLHR;LS(0.826)S(0.174)PVLHR;LS(0.785)S(0.215)PVLHR 179.37 4.4156e-05 40808600000.0 23786240.0 22048330.0 20619140.0 22072230.0 20854100.0 19022710.0 19241550.0 19477360.0 24653090.0 18527410.0 True False 22466769.850506134 20989095.131581977 21948282.756190464 24169968.102942064 22495199.026402038 18903982.21077402 21186673.653431326 19409797.58420999 20176710.30982481 18363271.561506875 1.223462266800052 1.1429932330565409 1.1952272601685257 1.3162125290140128 1.2250104209947272 1.029445224259526 1.153752673235137 1.0569901729764126 1.0987535767928884 1.0 24.13031977334977 -6.250673287464598 24.6047631818331 1.076722987216249 1.220175018871327 0.6532579537433512 0.05546775627161433 403.00743511128195 921030.6962346575 0.018908229947437776 0.018717414523831 5.61470201915988e-07 6.250673287464598 0.14345203165507803 LS(ph)SSLGR ddPTM_KYSE-520_SHP099_60min_R1 1 LSSSLGR 7 0 Q9BST9;Q9BST9-3;Q9BST9-2 Q9BST9 RTKN Rhotekin 1 LS(0.333)S(0.333)S(0.333)LGR 94.11399999999999 0.011143 4684800000.0 3208700.0 2784400.0 2917600.0 2646900.0 2634400.0 2653200.0 2504500.0 2664800.0 3151000.0 2676100.0 True False 3030707.014615129 2650633.2445303947 3105673.1643250524 2898460.580180495 2841712.2923143916 2636640.3946454297 2757679.3015645193 2655556.430768999 2578857.8302459414 2652391.8359742933 1.142631708298058 0.9993369790164308 1.1708953112443348 1.0927723954163862 1.0713772579798926 0.9940614199172131 1.0396952909303279 1.001193109838367 0.9722763414021214 1.0 21.33886248883924 -6.116924324136105 2.90012098587728 1.003361596632016 1.0985729900535377 0.5361575228879384 0.04423380985376011 0.22699433499895982 3.6776638550655836 0.015257823744959292 0.015474574450362922 7.6396889364855e-07 6.116924324136105 0.09521139342152174 LS(ph)STDDGYIDLQFK ddPTM_KYSE-520_SHP099_60min_R1 1 LSSTDDGYIDLQFK 14 0 Q5JWB9;A0A087WTT2;Q96A57;Q96A57-2 Q5JWB9 TMEM230 Transmembrane protein 230 1 LS(0.543)S(0.396)T(0.061)DDGYIDLQFK 94.023 0.0034406 109450000.0 305470.0 317180.0 281050.0 324880.0 294240.0 384870.0 373310.0 473510.0 507480.0 354900.0 True False 288524.9701606518 301942.19670311385 299166.9326958998 355756.49752126646 317395.01400341094 382467.88356972253 411047.81795450236 471867.50432806514 415334.4245297397 351755.8621080217 0.8202421089205554 0.8583856851556594 0.8504959402894835 1.0113733297556706 0.9023162033499849 1.0873106173061287 1.1685599651165801 1.341463086074051 1.1807462768088668 1.0 18.424214941007932 -6.3317180919430465 1.4039137998769107 1.206941250043285 0.8711051449876611 0.6841748803324479 0.09145194184199353 0.22246589680713755 0.8827562823982414 0.04320204250558745 0.03685679092246681 4.6588841161536743e-07 6.3317180919430465 -0.3358361050556239 LS(ph)T(ph)IWKGFINMQSVAK ddPTM_KYSE-520_SHP099_60min_R1 1 LSTIWKGFINMQSVAK 16 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 2 LS(0.999)T(0.999)IWKGFINMQS(0.002)VAK 48.111999999999995 0.058929999999999996 0.0 495970.0 612600.0 793830.0 530050.0 744180.0 351540.0 657240.0 478250.0 1356500.0 483580.0 True False 468457.5554083175 583169.776468653 845001.5519729091 580425.7926346558 802742.7321950054 349345.90846285765 723680.2332442665 476591.0623743889 1110193.7945822342 479295.85741954687 0.9773870317394748 1.2167219212123945 1.7630061660083272 1.210996889811601 1.6748376180775804 0.728873206506897 1.509882094830626 0.9943567318530142 2.316301669201445 1.0 18.870556945155 LS(ph)TGSFPEDLLESDSSR ddPTM_KYSE-520_SHP099_60min_R1 10 LSTGSFPEDLLESDSSR 17 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 LS(0.93)T(0.031)GS(0.039)FPEDLLESDSSR;LS(0.38)T(0.38)GS(0.24)FPEDLLESDSSR;LS(0.43)T(0.43)GS(0.139)FPEDLLESDSSR;LS(0.417)T(0.235)GS(0.347)FPEDLLESDSSR;LS(0.964)T(0.02)GS(0.016)FPEDLLESDSSR;LS(0.473)T(0.473)GS(0.054)FPEDLLESDSSR;LS(0.987)T(0.013)GSFPEDLLESDSSR;LS(0.812)T(0.157)GS(0.031)FPEDLLESDSSR;LS(0.333)T(0.333)GS(0.333)FPEDLLESDSSR;LS(0.985)T(0.009)GS(0.006)FPEDLLESDSSR 370.7 3.440799999999999e-72 200616000.0 727418.0 732552.0 663487.0 599904.0 603610.0 627125.0 598926.0 671148.0 744432.0 588535.0 True False 687066.6734681684 697359.1023370313 706256.4336367338 656918.6957922862 651110.6729288986 623210.8802547926 659471.285034471 668819.9442351209 609261.91440357 583321.0377733017 1.1778534100036793 1.195497945692212 1.2107508351365324 1.1261700731726172 1.11621325267878 1.0683840285167179 1.1305460326818588 1.146572643407809 1.044471011587876 1.0 19.15393058106559 -1.0000000002211697 0.06130437807129648 0.8142139572702688 1.7863669039175587 0.7308659647790403 0.033175303502546806 182.2876699134863 0.8355634903259253 2.634653387867106 15.745487976221742 0.09999999994907378 1.0000000002211697 0.9721529466472899 LS(ph)TGTTVEDVQK ddPTM_KYSE-520_SHP099_60min_R1 7 LSTGTTVEDVQK 12 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 LS(0.962)T(0.038)GTTVEDVQK;LS(0.999)T(0.001)GTTVEDVQK;LS(0.998)T(0.002)GTTVEDVQK;LS(0.889)T(0.111)GTTVEDVQK;LS(0.999)T(0.001)GTTVEDVQK;LS(0.841)T(0.159)GTTVEDVQK;LS(0.999)T(0.001)GTTVEDVQK 265.77 1.1949000000000002e-17 7342320000.0 6939790.0 6577350.0 6214770.0 6138570.0 7204040.0 11286400.0 11693610.0 14825520.0 16781340.0 14341200.0 True False 6554826.014571617 6261364.233196374 6615384.018183587 6721977.847171625 7770956.962619409 11215957.391122501 12875714.217435777 14774093.73142239 13734271.679155638 14214148.12528476 0.4611480024547937 0.4405022501530275 0.4654084057570673 0.47290754169180715 0.5467057817412276 0.7890699669276035 0.9058379090993067 1.0393935395355545 0.966239521222134 1.0 23.76082430299102 -6.425039014424169 1.4024479618407817 1.0038229028254648 0.451243885303793 0.9908779596629101 0.023003809075933253 0.03313552065394747 0.13167182301007913 0.011034392396189493 0.00871236489932258 3.758036428157142e-07 6.425039014424169 -0.5525790175216718 down LS(ph)TPQKK ddPTM_KYSE-520_SHP099_60min_R1 2 LSTPQKK 7 1 B5MC51;P53671-3;F5GXC4;F5H2U0;Q96C90 B5MC51;Q96C90 LIMK2;PPP1R14B LIM domain kinase 2;Protein phosphatase 1 regulatory subunit 14B 1 LS(0.5)T(0.5)PQKK;LS(0.5)T(0.5)PQKK 93.551 0.004354600000000001 4093910000.0 2003130.0 1796750.0 1587000.0 1182850.0 1369210.0 2074880.0 1638010.0 1342510.0 1784640.0 2160400.0 True False 1892012.3857593443 1710431.4330232686 1689300.5592897774 1295267.7083631784 1476959.0372607738 2061929.904282341 1803596.0362370517 1337853.146154188 1460594.3631133358 2141260.536765765 0.8835974666665768 0.7987965049814836 0.7889280777767269 0.6049089711986175 0.6897614801660823 0.962951433923474 0.8423057377974501 0.6247969937254475 0.6821189379034972 1.0 21.030028914898978 -10.245445239564289 3.319259608937383 1.0007383611302776 0.7631454706439343 0.29632987164240265 0.10897834399365226 38710594.10426537 54654285.940001726 289600.47827715136 0.028732883373554775 5.68270040532002e-11 10.245445239564289 -0.23759289048634324 LS(ph)TSTTIENIEITIK ddPTM_KYSE-520_SHP099_60min_R1 2 LSTSTTIENIEITIK 15 0 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 LS(0.97)T(0.029)S(0.001)TTIENIEITIK;LS(0.936)T(0.049)S(0.005)T(0.008)T(0.002)IENIEITIK 181.72 5.745e-09 49576000.0 145198.0 165397.0 136972.0 134582.0 134001.0 148237.0 142035.0 201714.0 207310.0 164028.0 True False 137143.5774949629 157451.07985404143 145801.43428294876 147372.63281644628 144546.1163386048 147311.79789727664 156393.2839280161 201014.30121440138 169667.7298598178 162574.83953185313 0.8435719690074951 0.9684836860822624 0.8968265612489319 0.9064910243234268 0.8891050838791327 0.906116827926587 0.9619771692739338 1.2364416400055362 1.0436284627337735 1.0 17.31074447421551 -7.056970125971112 6.891359490598009 1.1052986376266223 0.9064312484776211 0.6436715223391472 0.06349733121260431 0.1383807087166559 13.978127130871373 0.02782616382232569 0.01613394862143736 8.77061149906901e-08 7.056970125971112 -0.19886738914900115 LS(ph)VDYGK ddPTM_KYSE-520_SHP099_60min_R1 6 LSVDYGK 7 0 Q9BQE3;F5H5D3;F8VQQ4;C9JQ00;C9JEV8;C9JJQ8;P68363;P68366-2;P68366;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2;C9JDS9 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1A;TUBA4A;TUBA1B Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain 1 LS(1)VDYGK;LS(1)VDYGK;LS(1)VDYGK;LS(1)VDYGK;LS(1)VDYGK;LS(1)VDYGK 129.38 0.0020894999999999998 4314740000.0 12598370.0 10115980.0 8769730.0 9413680.0 9963500.0 10673580.0 11031020.0 9955620.0 10436040.0 10413180.0 True False 11899513.301872049 9629993.136404462 9335040.827864114 10308353.3168739 10747570.765439726 10606962.228056531 12146143.15398053 9921086.277879177 8541118.207159588 10320927.326531447 1.1529500136371096 0.9330550280738013 0.9044769459685111 0.9987816976847397 1.0413377040076166 1.0277140699159648 1.176846107883843 0.9612591934811496 0.8275533716048362 1.0 23.299069265717286 -7.519501125214376 24.94600865739307 0.9073198555576218 1.026748409232765 0.23349364362573433 0.08839295368410144 208.64557959872317 1541057.8427527917 0.05860691576274327 0.023162055861595345 3.023422737109631e-08 7.519501125214376 0.11942855367514316 LS(ph)VDYGKK ddPTM_KYSE-520_SHP099_60min_R1 1 LSVDYGKK 8 1 Q9BQE3;F5H5D3;F8VQQ4;C9JQ00;C9JEV8;C9JJQ8;P68363;P68366-2;P68366;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2;C9JDS9 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1A;TUBA4A;TUBA1B Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain 1 LS(1)VDYGKK 61.353 0.021689 71465000.0 222990.0 196960.0 175800.0 166820.0 170140.0 198720.0 159830.0 158530.0 221410.0 188050.0 True False 210620.30018045587 187497.7459570129 187132.34928994544 182674.52264373802 183529.05003582232 197479.7147685588 175987.17619047992 157980.09643118005 181207.5252918929 186384.02330068612 1.1300340901036905 1.0059754191191057 1.0040149685365043 0.9800975395248137 0.9846823069150193 1.059531344325433 0.9442181420591326 0.8476053560466226 0.9722267074338117 1.0 17.507918672987294 -1.0000000000000002 0.4946230156466227 0.9545793686109603 5.838125406237347 0.4617989218665912 0.05068347840356814 102.00102817511744 1.1024208222108776 0.030411285357469085 516.0511076199745 0.09999999999999995 1.0000000000000002 4.883546037626386 LS(ph)VGSVTSRPST(ph)PTLGT(ph)PTPQTMSVSTK ddPTM_KYSE-520_SHP099_60min_R1 1 LSVGSVTSRPSTPTLGTPTPQTMSVSTK 28 1 D6RIE8;Q16594 D6RIE8 TAF9 Transcription initiation factor TFIID subunit 9 3 LS(0.951)VGS(0.045)VT(0.042)S(0.142)RPS(0.362)T(0.454)PT(0.022)LGT(0.959)PT(0.017)PQT(0.004)MS(0.001)VSTK 79.68 0.012178 202820000.0 130310.0 129890.0 126970.0 128490.0 108810.0 135350.0 104470.0 139970.0 172510.0 117960.0 True False 123081.44453345514 123649.8894311351 135154.689359183 140701.65096807276 117372.72795578842 134505.2304444666 115030.84712894603 139484.47673924352 141186.53262320778 116914.96617149124 1.0527432762792652 1.0576053133331542 1.1560084545629314 1.2034528647229914 1.003915339492343 1.150453486401167 0.9838847060881704 1.193042099799672 1.2076001665699063 1.0 16.835100094121362 LS(ph)VPT(ph)SDEEDEVPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 2 LSVPTSDEEDEVPAPKPR 18 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 2 LS(1)VPT(0.5)S(0.5)DEEDEVPAPKPR;LS(0.994)VPT(0.745)S(0.261)DEEDEVPAPKPR 276.14 1.1170999999999999e-24 648390000.0 2841370.0 2926410.0 2465240.0 2489810.0 2509440.0 2626600.0 2553030.0 2758210.0 3050690.0 2682140.0 True False 2683753.5419693305 2785820.870969038 2624153.3149234615 2726440.7938113273 2706918.6512395334 2610206.4151122016 2811115.1875716764 2748642.413281051 2496761.5976366233 2658378.326273343 1.0095453741272258 1.0479399577690474 0.987125605482249 1.02560300272738 1.0182593743284978 0.9818792115911239 1.057454900150517 1.0339545677587 0.9392047674180061 1.0 21.342115005239314 -7.749612201927835 24.999573966420755 0.9696023736430649 1.020118270610965 0.37256959128360057 0.02627472864137698 195.8855223532252 414056.8949394789 0.017439974673080734 0.006474104825381576 1.7798680125618378e-08 7.749612201927835 0.050515896967900153 LS(ph)VPTS(ph)DEEDEVPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 1 LSVPTSDEEDEVPAPKPR 18 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 2 LS(0.852)VPT(0.158)S(0.99)DEEDEVPAPKPR 199.05 2.8106e-12 946070000.0 2042700.0 2056700.0 1802300.0 1825500.0 1680200.0 1671000.0 1741900.0 1998100.0 2086300.0 1810300.0 True False 1929387.358978503 1957893.0448303611 1918479.1417819583 1998994.9711434126 1812422.1809697247 1660570.669174024 1917988.251305744 1991169.057460045 1707480.511343102 1794262.1503920897 1.075309624380632 1.091196759850568 1.0692301241280289 1.1141041852254332 1.0101211690686707 0.9254894379905128 1.0689565350785655 1.1097425518478035 0.9516338016548898 1.0 20.774959259715484 -5.772918888549807 24.946605380781193 1.015100937252028 1.0864249254840603 0.3543689051471455 0.05037531328416749 272.4166993806752 591997.6017167702 0.016319673848088974 0.018656616566268207 1.6868680455948294e-06 5.772918888549807 0.07132398823203223 LS(ph)WGYR ddPTM_KYSE-520_SHP099_60min_R1 5 LSWGYR 6 0 Q8N1Q1;Q9BTY2 Q8N1Q1 CA13;FUCA2 Carbonic anhydrase 13;Plasma alpha-L-fucosidase 1 LS(1)WGYR;LS(1)WGYR;LS(1)WGYR;LS(1)WGYR;LS(1)WGYR 130.27 0.0073038 3258010000.0 4271070.0 3849640.0 3581218.0 4109520.0 4256100.0 4138820.0 4048500.0 4257070.0 4416780.0 4266590.0 True False 4034145.232933037 3664697.5159725514 3812069.042431395 4500087.545227764 4591030.856103577 4112988.0891626687 4457761.889552395 4242303.217777605 3614804.0899630776 4228791.331956795 0.9539712216223992 0.8666063724352131 0.9014559346127468 1.0641545519687374 1.0856602976385599 0.9726155220951654 1.0541456268757645 1.0031952122391807 0.8548078649911518 1.0 22.011813942228496 -5.241078056412006 23.574970611084176 1.0091397425653705 0.9032706531671665 0.3308912540053629 0.06332210312934793 442.05433585410157 511821.8262236092 0.0176150993161962 0.030448547348931473 5.740132846491848e-06 5.241078056412006 -0.10586908939820405 LS(ph)YSDKNLIDSMDQSAFAGFSFVNPK ddPTM_KYSE-520_SHP099_60min_R1 2 LSYSDKNLIDSMDQSAFAGFSFVNPK 26 1 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 LS(0.999)YS(0.001)DKNLIDSMDQSAFAGFSFVNPK;LS(0.953)YS(0.047)DKNLIDSMDQSAFAGFSFVNPK 303.1 6.707799999999999e-50 284430000.0 304470.0 339350.0 339320.0 327220.0 327370.0 298410.0 250098.0 290110.0 411320.0 247548.0 True False 287580.4421541025 323047.1166252652 361193.1101311956 358318.8904177192 353132.1565194964 296547.51250043063 275380.34656126297 289103.67612218275 336634.6565334054 245354.9173094294 1.1720997700299618 1.3166523017668086 1.4721250101365477 1.4604104712758834 1.4392707527200024 1.2086471131387175 1.1223754941661388 1.1783080579452156 1.372031423804148 1.0 17.904510660075022 -6.346457358825273 5.821619649589353 1.1815867980762036 1.3791168688272628 0.40870690148690003 0.11778421088160626 0.2537057237982287 13.744898934518348 0.04336302666040594 0.03816509593772694 4.503421959359063e-07 6.346457358825273 0.19753007075105922 LS(ph)YSDSDLKR ddPTM_KYSE-520_SHP099_60min_R1 1 LSYSDSDLKR 10 1 A0A087WTF0;A2A3K4;A2A3K4-2 A0A087WTF0 PTPDC1 Protein tyrosine phosphatase domain-containing protein 1 1 LS(0.89)YS(0.11)DSDLKR 71.176 0.014987 0.0 175630.0 215540.0 187700.0 258930.0 175570.0 208750.0 183760.0 167090.0 218130.0 186060.0 True False 165887.45379027489 205185.1348678641 199799.44233061856 283538.629349857 189386.36014334866 207447.11381811905 202336.25412477372 166510.4037890991 178523.09060982155 184411.6531524894 0.899549735358118 1.1126473374120083 1.0834426074224552 1.5375309775863233 1.0269760988843026 1.1249132593946312 1.0971988519481604 0.9029277756726805 0.9680683815691484 1.0 17.492570298393403 -7.120458970546161 4.175500287809875 0.952578588874571 1.1398707010038691 0.20139297382443622 0.15431000267127232 0.3745655115449909 10.869714767101296 0.07923208783950063 0.04419658193905672 7.57776319499387e-08 7.120458970546161 0.18729211212929808 LSAMLVPVT(ph)PEVKPK ddPTM_KYSE-520_SHP099_60min_R1 4 LSAMLVPVTPEVKPK 15 1 Q5JSK7;Q5JSK8;Q5JSL0;Q5JSK6;P82970 Q5JSK7 HMGN5 High mobility group nucleosome-binding domain-containing protein 5 1 LSAMLVPVT(1)PEVKPK;LSAMLVPVT(1)PEVKPK;LSAMLVPVT(1)PEVKPK;LSAMLVPVT(1)PEVKPK 177.6 3.728e-08 2488091000.0 4543050.0 4722530.0 3179840.0 2936030.0 2930260.0 4258790.0 2931700.0 3880840.0 4473490.0 4185480.0 True False 4291037.960154356 4495652.570137951 3384817.5743238926 3215069.4084503963 3160854.7911012657 4232209.31189206 3228064.846634743 3867378.271834866 3661216.9835058465 4148399.9034541664 1.034383873305325 1.0837076161328236 0.815933288279542 0.7750143388474596 0.7619455367524667 1.0202028276898063 0.7781469775724597 0.9322578251471592 0.8825612449892628 1.0 21.984123545182396 -4.757435926113174 24.982166009170797 0.8630626239248028 1.059045813523324 0.421384735096651 0.08788544421622069 87.16196861285633 543882.7580855327 0.022300809574375247 0.054634159547594395 1.7480911490297457e-05 4.757435926113174 0.19598318959852123 LSAMPHIDNDVKLDFK ddPTM_KYSE-520_SHP099_60min_R1 1 LSAMPHIDNDVKLDFK 16 1 H0YKK3;H0YN74;H0YLV5;Q9P2T1-2;H0YNJ6 H0YKK3 GMPR2 GMP reductase 0 61.409 0.05134400000000001 13340000.0 70464.0 63840.0 63488.0 57871.0 62745.0 61064.0 60077.0 61772.0 77347.0 59082.0 False True 66555.22145349842 60773.030574206416 67580.53806439153 63371.04244044939 67682.67452978523 60682.876925459335 66150.16945501762 61557.72734969317 63302.73455919796 58558.57944510043 1.1365579917438906 1.0378159981012187 1.1540672383924429 1.0821820310696013 1.155811414333211 1.036276451725583 1.1296409523908348 1.0512161997953602 1.0810155430519834 1.0 15.837592935692461 -8.433684211986364 0.5133486648658862 0.9954396907100861 1.106980854861056 0.3571445285290631 0.04197298907012158 1.8423542611035513 0.9333705753552657 0.05829894976248905 0.02015273030671119 3.683967481528253e-09 8.433684211986364 0.11154116415096993 LSAS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 8 LSASPPK 7 0 H0YCV3;Q8TEY7-3;Q8TEY7-2;Q8TEY7 H0YCV3 USP33 Ubiquitin carboxyl-terminal hydrolase 33 1 LSAS(1)PPK;LSAS(1)PPK;LSAS(1)PPK;LS(0.001)AS(0.999)PPK;LSAS(1)PPK;LSAS(1)PPK;LSAS(1)PPK;LSAS(1)PPK 130.56 0.0020333 10036200000.0 14235670.0 16266620.0 12017640.0 10416920.0 12621730.0 15431000.0 12234160.0 15107260.0 18741690.0 15926520.0 True False 13445989.006995423 15485147.158505604 12792316.30330387 11406940.944838786 13614988.343179977 15334689.40516118 13470908.286695383 15054856.441120977 15338671.535557603 15785423.423445068 0.8517978039806626 0.9809776236668138 0.8103879104252769 0.7226249584092116 0.8625038415477988 0.9714461876509158 0.8533764299719648 0.9537188859160389 0.971698453953162 1.0 23.912089623798856 -7.259882744333106 0.8659114412398107 0.9983542922872111 0.8522766865235494 0.3647956268553232 0.069039289193393 0.7409897027623009 1.0134737319780454 0.06797474022895972 0.029251525782468812 5.4968926506174565e-08 7.259882744333106 -0.1460776057636617 LSASTASELS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 LSASTASELSPK 12 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;H0YF21 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 LSASTASELS(1)PK;LSASTASELS(1)PK;LSASTASELS(1)PK;LSASTASELS(1)PK;LSASTASELS(1)PK;LSASTASELS(1)PK;LSASTASELS(1)PK;LSASTASELS(1)PK 323.24 1.1304e-39 79525800000.0 66428300.0 68101400.0 51039300.0 39836500.0 44931800.0 55124800.0 45654900.0 61199400.0 64378300.0 60188700.0 True False 62743389.77746696 64829706.52171458 54329374.94376744 43622548.98271956 48467677.0330291 54780745.67569362 50270142.84088563 60987113.56544736 52688823.56487537 59655474.944100015 1.0517624716970315 1.086735233982515 0.9107190076799594 0.731241332393983 0.8124598300230715 0.9182852994972508 0.8426744215512678 1.0223221527042599 0.8832185748960557 1.0 25.830151213066433 -4.81392682485715 5.412919633573144 0.8803328079093821 1.0697170128629345 0.439576459967583 0.08073058473810206 0.16036491531848934 9.966261910139085 0.022207365528495098 0.04939331857662215 1.534875575258145e-05 4.81392682485715 0.18938420495355246 LSCS(ph)ELSLYQPLQNSSK ddPTM_KYSE-520_SHP099_60min_R1 5 LSCSELSLYQPLQNSSK 17 0 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 LS(0.027)CS(0.973)ELSLYQPLQNSSK;LS(0.026)CS(0.502)ELS(0.471)LY(0.001)QPLQNSSK;LS(0.06)CS(0.939)ELSLYQPLQNSSK;LS(0.023)CS(0.976)ELS(0.001)LYQPLQNSSK;LSCS(0.999)ELS(0.001)LYQPLQNSSK 233.63 2.3509000000000002e-21 625609000.0 1700470.0 1727910.0 1461870.0 1398640.0 1383460.0 1717170.0 1385720.0 1835940.0 2167080.0 2068770.0 True False 1606141.5392970948 1644898.6099542144 1556104.479274699 1531566.325083552 1492330.4311893673 1706452.5050781306 1525802.1009239329 1829571.552651619 1773592.8996411855 2050442.3072787076 0.7833146700083081 0.8022164798858837 0.7589116132411057 0.7469443639778414 0.727809032174111 0.832236293125891 0.7441331538603184 0.8922814097997118 0.8649806401990655 1.0 20.967503720853802 -7.8709166211293295 0.8791163442571633 0.9965829780406067 0.7667087525533163 0.7944802906843285 0.03642603198953991 0.23714843806340805 0.4108860360708928 0.03361530967302527 0.01215343532698122 1.3461187664783967e-08 7.8709166211293295 -0.22987422548729042 LSDDFDS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 1 LSDDFDSPVK 10 0 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 LSDDFDS(1)PVK 165.35 6.0991000000000006e-05 301220000.0 1139900.0 1011500.0 887850.0 1197800.0 953470.0 1009800.0 1017500.0 1031100.0 1157300.0 1002300.0 True False 1076667.4746656858 962906.0217075458 945082.2316102262 1311638.5518682986 1028502.6644977985 1003497.4636337083 1120358.8298430422 1027523.3547605487 947163.4931588789 993420.4017776003 1.0837984329082888 0.9692835178183851 0.9513416776211974 1.3203257649241822 1.0353146187227713 1.0101438040109467 1.1277791636232772 1.0343288228447145 0.9534367237315133 1.0 19.922044850003115 -9.69421745250871 7.599085432937371 0.9999874418249485 1.0560522043582754 0.023401193827134792 0.10382085295283434 0.0 0.0 0.10169436428117773 0.02466450620360798 2.022006500645232e-10 9.69421745250871 0.05606476253332693 LSDDFDS(ph)PVKGPLCK ddPTM_KYSE-520_SHP099_60min_R1 11 LSDDFDSPVKGPLCK 15 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 LSDDFDS(1)PVKGPLCK;LSDDFDS(1)PVKGPLCK;LS(0.004)DDFDS(0.996)PVKGPLCK;LSDDFDS(1)PVKGPLCK;LSDDFDS(1)PVKGPLCK;LSDDFDS(1)PVKGPLCK;LSDDFDS(1)PVKGPLCK;LSDDFDS(1)PVKGPLCK;LSDDFDS(1)PVKGPLCK;LS(0.003)DDFDS(0.997)PVKGPLCK;LSDDFDS(1)PVKGPLCK 236.17 8.385099999999999e-19 23872690000.0 25915756.0 21944856.0 21215926.0 19652013.0 21759206.0 21166746.0 19371914.0 18634947.0 24843760.0 20554308.0 True False 24478157.35290124 20890592.177859616 22583538.536641818 21519734.40692685 23471531.719253365 21034636.486808255 21330216.118781377 18570306.71828634 20332759.444224346 20372212.82212963 1.2015463203050512 1.0254454123494572 1.1085461718773182 1.0563277830845508 1.15213462200616 1.0325160389036903 1.0470249994448861 0.9115507912873391 0.9980633729752506 1.0 24.280099358021786 -6.805813410701232 1.8751387661681984 0.9685475603048941 1.0998136952035484 0.52253624065641 0.05442534553767853 0.2634061614330626 1.8895159025264834 0.02736020441051516 0.016580245951315804 1.563819374148343e-07 6.805813410701232 0.13126613489865435 LSDIPLKPEVLAEDGVVLDS(ph)EDEVDSAVQHPELPVK ddPTM_KYSE-520_SHP099_60min_R1 1 LSDIPLKPEVLAEDGVVLDSEDEVDSAVQHPELPVK 36 1 A0A087WVA8;Q8IWB9;Q8IWB9-2 A0A087WVA8 TEX2 Testis-expressed sequence 2 protein 1 LSDIPLKPEVLAEDGVVLDS(0.98)EDEVDS(0.02)AVQHPELPVK 86.186 0.0010724 35952000.0 18452.0 22667.0 21744.0 26428.0 17875.0 38179.0 19978.0 32977.0 31257.0 28349.0 True False 17428.430776849927 21578.043296139345 23145.653031630085 28939.70917413208 19281.660805162355 37940.71069921901 21997.571206490727 32862.61048388967 25581.51672484844 28097.849915188253 0.6202763140046887 0.7679606575332786 0.8237517497422012 1.0299616967662981 0.6862326072408722 1.3503065470753408 0.7828916188565721 1.1695774083456056 0.9104439237188888 1.0 14.778172117277723 -4.148257641575591 0.581340633542296 1.0223666925719765 0.30419425217191587 0.34016708338560686 0.1744749962913966 4.605711529194151 1.0809331411863787 0.08489007048580263 2.298183050879819 7.107917173000217e-05 4.148257641575591 -0.7181724404000607 LSDIS(ph)PIGR ddPTM_KYSE-520_SHP099_60min_R1 4 LSDISPIGR 9 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 LSDIS(1)PIGR;LSDIS(1)PIGR;LSDIS(1)PIGR;LSDIS(1)PIGR 119.27 0.00077893 841970000.0 1538740.0 1361730.0 1201410.0 1280250.0 1386500.0 1463270.0 1366690.0 1489740.0 1540530.0 1474100.0 True False 1453383.0247978563 1296310.4468015989 1278854.810923967 1401924.575078803 1495609.6618941338 1454137.189157554 1504848.362809028 1484572.43964793 1260808.5856010101 1461040.620832445 0.9947588068905122 0.8872514756386518 0.8753040762106425 0.9595383968722513 1.0236605612251852 0.9952749899103025 1.0299839315566892 1.016106204358697 0.8629524515770476 1.0 20.4785648587995 -5.508707510337653 9.607910592441785 0.9913196683911485 0.9161150930361471 0.24914104073154497 0.05329917453668869 0.35121671018370226 220.42121502365114 0.015343922126607987 0.021519410217922863 3.099506059022007e-06 5.508707510337653 -0.07520457535500136 LSDIS(ph)PIGRDPSESSFSSATLTPSSTCPSLVDSR ddPTM_KYSE-520_SHP099_60min_R1 1 LSDISPIGRDPSESSFSSATLTPSSTCPSLVDSR 34 1 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 LS(0.002)DIS(0.994)PIGRDPS(0.002)ESSFSS(0.001)ATLTPSSTCPSLVDSR 96.47399999999999 0.00090592 362630000.0 57978.0 77432.0 53955.0 53514.0 54690.0 60713.0 48436.0 58787.0 77939.0 60693.0 True False 54761.84476372237 73712.05049219842 57433.025631052355 58599.95447042919 58993.79185646603 60334.067646656156 53332.38356980597 58583.08161798892 63787.24228230355 60155.307238439505 0.9103410368541732 1.225362380745952 0.954745778346759 0.9741443799489659 0.9806913897493775 1.0029716481624489 0.8865781926507449 0.9738638917723634 1.060375970310783 1.0 15.876404405210284 LSDPLLPS(ph)PEDETGSLVHLEDPER ddPTM_KYSE-520_SHP099_60min_R1 2 LSDPLLPSPEDETGSLVHLEDPER 24 0 Q8WYL5-4;Q8WYL5;Q8WYL5-2;Q8WYL5-5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 LSDPLLPS(1)PEDETGSLVHLEDPER;LSDPLLPS(1)PEDETGSLVHLEDPER 142.32 7.665600000000001e-07 198665000.0 197780.0 240010.0 196396.0 238910.0 189502.0 207111.0 169446.0 170113.0 214794.0 201454.0 True False 186808.7491353448 228479.5593376452 209056.0004047103 261615.93456908927 204414.7292811119 205818.34342507523 186575.25531359625 169522.91770767263 175792.82411610507 199669.27428884024 0.935590865448374 1.1442900273535737 1.0470113699231023 1.3102463335978143 1.0237665760501884 1.0307962712747671 0.9344214625816576 0.8490185498568092 0.8804200082472596 1.0 17.607252818026943 -6.5885087782024865 1.8906969326710186 0.8977249578159282 1.105445323290389 0.4220682428208812 0.0973315821915052 0.30661748671641553 2.225576206883622 0.04571605502703064 0.03303720522191101 2.579236830926085e-07 6.5885087782024865 0.2077203654744607 LSDPPT(ph)SPS(ph)SPSQMMPHVQTHF ddPTM_KYSE-520_SHP099_60min_R1 1 LSDPPTSPSSPSQMMPHVQTHF 22 0 Q13496-2;Q13496 Q13496-2 MTM1 Myotubularin 2 LS(0.003)DPPT(0.496)S(0.495)PS(0.563)S(0.424)PS(0.018)QMMPHVQTHF 58.294 0.0084821 0.0 49348.0 79053.0 65157.0 71314.0 73100.0 72433.0 76184.0 84378.0 123090.0 79183.0 True False 46610.56806720087 75255.17521902783 69357.124474886 78091.66111866405 78852.55411789476 71980.91877934292 83885.42220418896 84085.31241197328 100739.95884638936 78481.50022344176 0.5939051615284832 0.9588906303367243 0.8837385151586287 0.995032726137143 1.004727915411869 0.9171705252117851 1.0688559974689817 1.0714029697772993 1.283614081784578 1.0 16.26006499939703 -3.456511787893437 0.4593046952739477 1.089715126676828 1.410679534856404e-17 0.644597487253318 0.09838318184264505 6.690516015537406 0.6254377539821466 0.06467688087261698 4.617825493913129 0.000349533022225151 3.456511787893437 -1.089715126676828 LSDPPTSPSS(ph)PSQMMPHVQTHF ddPTM_KYSE-520_SHP099_60min_R1 3 LSDPPTSPSSPSQMMPHVQTHF 22 0 Q13496-2;Q13496 Q13496-2 MTM1 Myotubularin 1 LSDPPTS(0.001)PS(0.005)S(0.993)PS(0.001)QMMPHVQTHF;LSDPPT(0.014)S(0.018)PS(0.073)S(0.822)PS(0.073)QMMPHVQTHF;LSDPPTS(0.001)PS(0.036)S(0.955)PS(0.008)QMMPHVQTHF 166.49 1.0371e-09 1755500000.0 632350.0 922990.0 640090.0 736620.0 521531.0 753470.0 528840.0 603900.0 841820.0 708220.0 True False 597272.2849415266 878648.174963765 681351.2255802109 806628.1433271222 562572.5225945244 748767.314244495 582300.3081810272 601805.2118513195 688966.7085552653 701945.7217868227 0.8508810103167993 1.2517323600564745 0.97066084233096 1.149131789383697 0.8014473272413146 1.0667025825565069 0.8295517589291168 0.8573386704593161 0.9815099475234084 1.0 19.420999952350613 -5.753883862382172 24.999944964007096 0.9181621903062015 1.0635436455310883 0.21359305357134772 0.124314633799906 241.65799121090603 799601.7012627932 0.03449134608492802 0.04365148564762088 1.762447291321798e-06 5.753883862382172 0.14538145522488677 LSDS(ph)PSMKK ddPTM_KYSE-520_SHP099_60min_R1 2 LSDSPSMKK 9 1 F6VRR5;Q9BY77-2;Q9BY77 F6VRR5 POLDIP3 Polymerase delta-interacting protein 3 1 LSDS(0.992)PS(0.008)MKK;LSDS(0.988)PS(0.012)MKK 150.09 0.00029178 1516090000.0 1357740.0 1390370.0 1234280.0 1085430.0 1170510.0 1162470.0 1093370.0 1069430.0 1390520.0 1119920.0 True False 1282423.455612411 1323574.5382120817 1313843.6637178247 1188588.9408535706 1262622.4777091255 1155214.5935336482 1203898.5098628865 1065720.3969368385 1138036.6201566446 1109998.3800845763 1.1553381325788032 1.1924112340697577 1.1836446676775478 1.0708024103269467 1.1374993877134487 1.0407353868801381 1.0845948349682777 0.9601098668771354 1.025259712604204 1.0 20.08212614045302 -6.136558499190487 0.601324986743663 0.9900644149016616 1.18994219881296 0.768633678352854 0.036481694917215285 0.38561020869874935 0.30564884325513253 0.027928083611166027 0.03570718600084867 7.301994488473988e-07 6.136558499190487 0.1998777839112983 LSDVDANTAIKHEEQS(ph)NEDIPIAEQSSK ddPTM_KYSE-520_SHP099_60min_R1 1 LSDVDANTAIKHEEQSNEDIPIAEQSSK 28 1 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LS(0.005)DVDANT(0.014)AIKHEEQS(0.981)NEDIPIAEQSSK 115.74 0.00022511 568570000.0 324980.0 310750.0 303360.0 320980.0 308300.0 281150.0 259300.0 271540.0 414690.0 321210.0 True False 306952.7115684315 295821.1035547408 322915.0709931613 351485.84269384376 332561.4560129542 279395.23856270255 285512.5745241289 270598.09111791226 339392.749484192 318364.32929759845 0.9641554763552055 0.9291904787430351 1.014294131838209 1.104036508956015 1.0445939617251676 0.877595926588658 0.8968108178263885 0.8499635989839942 1.0660514330640878 1.0 18.28031917455096 -6.254906021601237 24.987811884946694 0.9261274836771844 1.0120184890507802 0.1936716124162995 0.07261995858087184 805.6235096146567 3081230.0981391766 0.025331384733724257 0.024753769351306826 5.560245642212497e-07 6.254906021601237 0.08589100537359573 LSEAACEDEDS(ph)ASEGLGELFLDGLSTENPHGAR ddPTM_KYSE-520_SHP099_60min_R1 6 LSEAACEDEDSASEGLGELFLDGLSTENPHGAR 33 0 O95801 O95801 TTC4 Tetratricopeptide repeat protein 4 1 LSEAACEDEDS(0.997)AS(0.003)EGLGELFLDGLSTENPHGAR;LSEAACEDEDS(0.828)AS(0.172)EGLGELFLDGLSTENPHGAR;LSEAACEDEDS(0.883)AS(0.117)EGLGELFLDGLSTENPHGAR;LSEAACEDEDS(0.996)AS(0.004)EGLGELFLDGLSTENPHGAR;LSEAACEDEDS(1)ASEGLGELFLDGLSTENPHGAR;LSEAACEDEDS(0.98)AS(0.02)EGLGELFLDGLSTENPHGAR 248.5 1.4519999999999998e-31 1521672000.0 587134.0 613658.0 551314.0 594717.0 536529.0 584757.0 482396.0 530335.0 708121.0 645376.0 True False 554564.5065973882 584176.9485605626 586852.5825735894 651238.7248718136 578750.7798675784 581107.3146584047 531161.2954112669 528495.3916661198 579544.0766777492 639658.470734931 0.8669696908105122 0.9132638357612567 0.9174467460726806 1.0181038079955036 0.9047809203599335 0.9084649719259492 0.8303826490423756 0.8262149503920566 0.9060211084391429 1.0 19.286942295030805 -6.403655851244168 3.136458417537643 0.8760708566285066 0.9285279756651833 0.0369313833386552 0.058142163222578425 0.532376932299207 9.93197117510276 0.02223409495498133 0.019000831290234624 3.9477000646528044e-07 6.403655851244168 0.052457119036676714 LSEAY(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 LSEAYSR 7 0 O75815;O75815-3 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 LSEAY(1)SR 140.98 0.0027881 689770000.0 2844400.0 2474000.0 2346100.0 2267700.0 2385500.0 2400100.0 2150000.0 2433200.0 2717400.0 2263400.0 True False 2686615.46182918 2355145.3264502897 2497333.3598927245 2483221.5261911326 2573225.2783616693 2385120.085628107 2367342.981977925 2424759.79711315 2223988.6600794424 2243348.0368985515 1.197591910679829 1.0498350178897335 1.1132170839373234 1.1069265603674268 1.1470468407207899 1.0631966357416198 1.0552722729776687 1.0808665250468232 0.9913703194953764 1.0 21.097222029318747 -7.232715233694815 0.6967626500537143 0.9949427828806411 1.1197506914548403 0.5577524528703064 0.04001635707617135 0.5422926089586024 0.5123518226722389 0.03613339737775981 0.018114102428080984 5.8517365595279695e-08 7.232715233694815 0.12480790857419921 LSEEAECPNPST(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 LSEEAECPNPSTPSK 15 0 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 LSEEAECPNPS(0.005)T(0.956)PS(0.039)K 165.36 2.0586e-07 388540000.0 568330.0 660880.0 444040.0 541230.0 488330.0 901190.0 831240.0 1238000.0 1362100.0 1190200.0 True False 536803.6019622333 629130.3327988955 472663.5288891206 592668.3364732672 526758.7927823745 895565.3389305439 915269.8513206196 1233705.666951373 1114776.9757467469 1179655.7539615885 0.45505106058229977 0.5333168856135474 0.40067920433719284 0.502407871519241 0.44653602630545614 0.7591751542117302 0.7758787665358365 1.0458183777837482 0.9450019397633912 1.0 20.1699344844111 -6.656986637860533 1.3175367826306792 0.998839094035366 0.46110942386365045 0.9305078422837023 0.06225330794635452 0.09778638979908753 0.34543832743020514 0.03464176053430771 0.02210274475382258 2.2029942425549199e-07 6.656986637860533 -0.5377296701717156 down LSELEDLLPSRPEVPNIIGETEEVELQEFDSTRGS(ph)GGGQR ddPTM_KYSE-520_SHP099_60min_R1 1 LSELEDLLPSRPEVPNIIGETEEVELQEFDSTRGSGGGQR 40 2 O60884 O60884 DNAJA2 DnaJ homolog subfamily A member 2 1 LSELEDLLPSRPEVPNIIGETEEVELQEFDS(0.044)T(0.044)RGS(0.913)GGGQR 115.14 4.368e-05 47843000.0 23116.0 22741.0 24262.0 21744.0 22500.0 19872.0 19041.0 20486.0 27618.0 20283.0 True False 21833.709399396455 21648.488225063087 25825.967340572544 23810.54322242801 24270.62199251205 19747.971476855888 20965.850102251967 20414.938847468344 22603.26739312358 20103.30839993522 1.0860754342039947 1.0768619669154977 1.2846625454273868 1.184409190205963 1.2072949143331184 0.9823244554572681 1.0429054603927543 1.0155014508723414 1.1243556007525815 1.0 14.295145324705452 -6.257527337028085 24.98883248875182 1.0346042373918871 1.1702136607850298 0.5143137699114626 0.06548941087787706 300.75978130287075 1921158.3785371508 0.02311845409137125 0.02226894412905649 5.526786180333166e-07 6.257527337028085 0.13560942339314264 LSELLR ddPTM_KYSE-520_SHP099_60min_R1 1 LSELLR 6 0 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538;P08238;P07900;P07900-2 Q92538-3;P08238;P07900 GBF1;HSP90AB1;HSP90AA1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1;Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha 0 150.07 0.051567999999999996 2922300000.0 581260.0 611910.0 439910.0 371430.0 550260.0 560440.0 438640.0 495140.0 484970.0 495440.0 False True 549016.3490869176 582512.9251043648 468267.30248088675 406730.5955254982 593562.3314488755 556942.0860753378 482982.0119138598 493422.47490654443 396911.673098818 491050.7870464875 1.118043924517613 1.1862580011489088 0.9536025902684403 0.828286210417973 1.2087595562547857 1.1341842855505135 0.9835683490476438 1.0048298219300733 0.8082904733461767 1.0 18.905512717777153 -7.300778570580302 2.2081400814804546 0.9120920648746202 1.0638535213457618 0.20999337467283652 0.11717541197857637 0.5513197911652218 5.065681204810467 0.0882966054385455 0.03561884737721677 5.0028954763031945e-08 7.300778570580302 0.1517614564711416 LSESSAS(ph)PQPK ddPTM_KYSE-520_SHP099_60min_R1 1 LSESSASPQPK 11 0 Q8N5Y2;Q8N5Y2-3;Q8N5Y2-2;A0A3B3IT59;Q8N5Y2-6;Q8N5Y2-4;A0A3B3ITL5;A0A3B3ITF3;A0A3F2YNX2;A0A3B3IRN2;A0A3B3IU80;A0A3B3IUB0;A0A3B3IS72;A0A3B3ISB4;A0A3B3IRI6;A0A3B3ITV8;A0A3B3IRT2;A0A3B3ITF8;A0A3B3IT49;Q8N5Y2-5;A0A3B3ITX5 Q8N5Y2 MSL3 Male-specific lethal 3 homolog 1 LSES(0.007)S(0.48)AS(0.513)PQPK 149.69 6.4816e-05 0.0 389510.0 425470.0 277650.0 315120.0 322890.0 411170.0 299450.0 378840.0 427060.0 407210.0 True False 367903.1038310656 405029.78255651036 295547.76325570716 345068.91005571745 348299.60600721004 408603.73551423283 329721.32835036766 377525.8924619207 349516.6693065161 403602.4362045858 0.9115482733225518 1.003536515699328 0.7322744779119573 0.8549723170669917 0.86297696634977 1.0123916479709054 0.816945832763091 0.9353905194728632 0.8659924667286854 1.0 18.622575357230108 LSFASETPLEKEPHS(ph)PADQPEQQAESTLTSAETR ddPTM_KYSE-520_SHP099_60min_R1 3 LSFASETPLEKEPHSPADQPEQQAESTLTSAETR 34 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2 H3BSS6 ZNF106 Zinc finger protein 106 1 LSFAS(0.001)ET(0.001)PLEKEPHS(0.998)PADQPEQQAESTLTSAETR;LS(0.036)FAS(0.033)ET(0.029)PLEKEPHS(0.903)PADQPEQQAESTLTSAETR;LS(0.018)FAS(0.015)ET(0.013)PLEKEPHS(0.954)PADQPEQQAESTLTSAETR 177.58 8.3924e-11 2552600000.0 674760.0 675130.0 676265.0 521693.0 559950.0 543980.0 484749.0 617280.0 788520.0 555570.0 True False 637329.7176992886 642695.7414092104 719858.1239622575 571274.5458672796 604014.8793203174 540584.8190408644 533752.1596143338 615138.7997542347 645344.6449716059 550648.0820269202 1.1574174840549627 1.1671624080546423 1.307292529400048 1.0374585229906441 1.0969163410084997 0.9817246925676864 0.969316296625618 1.1171178468286425 1.171972927965372 1.0 19.07077106452493 -5.283306162285417 24.88524185998067 1.053691450259258 1.2062779725750004 0.5115545230730716 0.07031912330564305 634.2071297046449 721750.4217059079 0.020885479802403295 0.03100474704894145 5.208274167044074e-06 5.283306162285417 0.15258652231574232 LSFDKDAMVAR ddPTM_KYSE-520_SHP099_60min_R1 1 LSFDKDAMVAR 11 1 P37837;F2Z393 P37837 TALDO1 Transaldolase 0 120.53 0.00024769 848860000.0 2200600.0 2007100.0 1188000.0 1259100.0 2004600.0 1927200.0 1407900.0 1584700.0 1653200.0 1675100.0 False True 2078528.3312126584 1910675.9032814782 1264580.380867206 1378764.4854377822 2162350.615386208 1915171.62994146 1550224.2717798701 1579203.0455717624 1353020.5537805737 1660259.9172080788 1.2519294778301622 1.1508293873012987 0.7616761494752857 0.8304509861060405 1.3024169245875992 1.1535372323883148 0.9337238439067743 0.9511782036076477 0.8149450214131748 1.0 20.66297768554309 -6.874900740486364 7.79718737921416 0.9185045210072074 1.063323337602392 0.16374667392526188 0.16499602247707762 0.5277873786630046 34.0025183614968 0.07621315357448814 0.051312451006924505 1.3338262479545744e-07 6.874900740486364 0.1448188165951847 LSFLS(ph)WGTNK ddPTM_KYSE-520_SHP099_60min_R1 2 LSFLSWGTNK 10 0 Q8IUC4-2;A8MT19;Q8IUC4 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 LSFLS(0.996)WGT(0.004)NK;LSFLS(1)WGTNK 128.85 0.0003816 313390000.0 484740.0 478540.0 470300.0 436020.0 461720.0 461400.0 415940.0 468280.0 563720.0 468760.0 True False 457850.5058947669 455550.22009681613 500616.2905066053 477459.2097058069 498054.73717256304 458520.2314523599 457987.2743832088 466655.64597737323 461362.6582247677 464607.15108976094 0.9854572940189449 0.9805062600269899 1.0775044881086806 1.027662205770834 1.0719911133617919 0.9868987818566204 0.9857516684988061 1.0044090903095388 0.9930166962402901 1.0 18.82565183427087 LSFS(ph)PENILIQNQDIVR ddPTM_KYSE-520_SHP099_60min_R1 3 LSFSPENILIQNQDIVR 17 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 LS(0.006)FS(0.994)PENILIQNQDIVR;LSFS(1)PENILIQNQDIVR;LSFS(1)PENILIQNQDIVR 290.57 1.3767999999999998e-37 913230000.0 504350.0 549630.0 473050.0 385160.0 438910.0 556600.0 384980.0 469670.0 587610.0 489720.0 True False 476372.7001032008 523224.9497885511 503543.55990676157 421765.49059742375 473449.71994370973 553126.0529397132 423897.5354427267 468040.82439180184 480914.8364426593 485381.4617963945 0.9814398315505246 1.077966488155724 1.0374181948423602 0.8689361333176419 0.9754178047745675 1.1395697950486126 0.8733286472744218 0.9642742074647536 0.9907977009727479 1.0 18.888759483038882 -5.100685464623713 22.78361966586652 0.9729194944968155 1.0369070049461222 0.11782798813689588 0.07375659344094448 38.68790599254332 8739.566122110526 0.02027732297568832 0.03512140055632912 7.930755030810433e-06 5.100685464623713 0.06398751044930673 LSFSGLR ddPTM_KYSE-520_SHP099_60min_R1 1 LSFSGLR 7 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 106.43 0.049868 0.0 106610.0 130640.0 105790.0 98062.0 132770.0 128160.0 129350.0 125510.0 131840.0 116210.0 False True 100696.13077823396 124363.85830536234 112609.39266998465 107381.78299658463 143218.24364203686 127360.10590146197 142425.9603343463 125074.63510425434 107901.17941593946 115180.46981001191 0.8742465710057477 1.0797304309532534 0.9776778377074845 0.9322915870521186 1.2434247219018357 1.1057439348141238 1.2365460964803785 1.0859014146283885 0.9368010010197084 1.0 16.813536586209207 -4.260428544027747 23.52704624513282 1.074248026250564 0.8742464464761247 0.22917332600492524 0.1048814359116474 58.292289879973616 1356270.7056538363 0.027382785975184103 0.16166809380799527 5.489988768592392e-05 4.260428544027747 -0.20000157977443933 LSGEMPPAS(ph)PSFPR ddPTM_KYSE-520_SHP099_60min_R1 6 LSGEMPPASPSFPR 14 0 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 LSGEMPPAS(0.983)PS(0.017)FPR;LSGEMPPAS(0.987)PS(0.013)FPR;LSGEMPPAS(0.985)PS(0.015)FPR;LSGEMPPAS(0.993)PS(0.007)FPR;LSGEMPPAS(0.861)PS(0.139)FPR;LSGEMPPAS(0.996)PS(0.004)FPR 201.97 6.9521e-12 3740550000.0 2845300.0 3024320.0 2265480.0 2034370.0 2121710.0 3039130.0 2323840.0 2969430.0 3246590.0 3157030.0 True False 2687465.5370350713 2879027.1276031304 2411516.4656961607 2227715.9131443542 2288676.5061214557 3020161.6623619646 2558756.4256928335 2959129.7404001714 2657091.095873748 3129061.1703321766 0.8588728026527439 0.9200929514898224 0.7706837081232764 0.7119438681052896 0.7314259394547065 0.9651973860393879 0.817739343018724 0.9456925190395158 0.8491655967184799 1.0 21.577298431569442 -6.26417726316325 24.987210345181936 0.9060510235602686 0.7989876860100502 0.37547174927241933 0.07491735895829206 313.41867077772116 2860395.479648778 0.027348272630482423 0.025198019100048603 5.442804520747002e-07 6.26417726316325 -0.10706333755021835 LSGFS(ph)FK ddPTM_KYSE-520_SHP099_60min_R1 6 LSGFSFK 7 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 LSGFS(1)FK;LSGFS(1)FK;LSGFS(1)FK;LSGFS(1)FK;LS(0.001)GFS(0.999)FK;LS(0.001)GFS(0.999)FK 109.83 0.0030207 30797301000.0 15459219.0 16015230.0 15610719.0 19774511.0 18691185.0 12816565.0 16891086.0 18179216.0 15418518.0 17538772.0 True False 14601665.30488095 15245834.311449684 16617010.92477351 21653874.58001648 20162074.921204947 12736572.063771607 18598601.813993298 18116156.54275693 12618903.80040875 17383392.125038143 0.8399779053392844 0.8770344822107746 0.9559130234909229 1.2456645069190697 1.1598469836140055 0.7326862313268827 1.0699063612104123 1.0421531317045625 0.7259172266057976 1.0 24.051206295527322 -9.836017606083846 14.425418845002834 1.000000673262504 0.9714854199335717 0.0014126713774946786 0.16404918567231272 0.0 0.0 0.16376704929270972 0.03971934366056331 1.4587551218643132e-10 9.836017606083846 -0.028515253328932233 LSGFS(ph)FKK ddPTM_KYSE-520_SHP099_60min_R1 7 LSGFSFKK 8 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 LSGFS(1)FKK;LS(0.005)GFS(0.995)FKK;LS(0.048)GFS(0.952)FKK;LSGFS(1)FKK;LS(0.028)GFS(0.972)FKK;LS(0.003)GFS(0.997)FKK;LSGFS(1)FKK 155.11 0.00017109999999999998 45075025000.0 25167220.0 27275200.0 28199710.0 29638170.0 29163960.0 20658220.0 24240220.0 25942760.0 29720710.0 26231050.0 True False 23771144.136990763 25964858.451090127 30017508.427731335 32454972.765759278 31458997.731766343 20529284.386202402 26690657.99934932 25852770.620645694 24324178.262129113 25998663.304448113 0.9143217810326332 0.998699746484574 1.1545789133934297 1.2483323617720976 1.2100236601927155 0.7896284568864756 1.0266165489663006 0.9943884544334455 0.9355934179111235 1.0 24.63193411463382 -6.246302061233136 24.991286835993677 0.9537303399338187 1.10997112797751 0.3389221251009158 0.10870554232551587 1071.6810067082292 1769316.3913901616 0.039139329494098936 0.03899068671203752 5.671500030671246e-07 6.246302061233136 0.15624078804369124 LSGINEIPRPFS(ph)PPVT(ph)SNTSPPPAAPLAR ddPTM_KYSE-520_SHP099_60min_R1 3 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 2 LS(0.005)GINEIPRPFS(0.951)PPVT(0.326)S(0.268)NT(0.233)S(0.218)PPPAAPLAR;LS(0.02)GINEIPRPFS(0.961)PPVT(0.613)S(0.149)NT(0.132)S(0.125)PPPAAPLAR;LSGINEIPRPFS(0.999)PPVT(0.496)S(0.377)NT(0.066)S(0.061)PPPAAPLAR 74.846 0.0014625 4056500000.0 290920.0 294270.0 255948.0 258098.0 233336.0 265384.0 267538.0 222592.0 319102.0 251843.0 True False 274782.08766535803 280132.8274917246 272446.81761127926 282627.5563200069 251698.21569976883 263727.6400168037 294583.3519592611 221819.8803053636 261161.1207068044 249611.86695088935 1.1008374362242195 1.1222736759820804 1.091481831129778 1.1322681079726602 1.0083583716365936 1.0565508893400952 1.180165653010479 0.8886591932306096 1.0462688489012717 1.0 17.929326998317368 -7.2607397403358975 24.999957565396727 0.9755980190312946 1.0956438745474253 0.49099493257409377 0.056155073073953204 53.39261029395001 1907956.3976061693 0.02758046370391337 0.014677540905403364 5.486056293396919e-08 7.2607397403358975 0.12004585551613067 LSGINEIPRPFS(ph)PPVTS(ph)NTSPPPAAPLAR ddPTM_KYSE-520_SHP099_60min_R1 1 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 2 LS(0.006)GINEIPRPFS(0.991)PPVT(0.111)S(0.339)NT(0.288)S(0.265)PPPAAPLAR 50.88 0.063836 0.0 71097.0 52952.0 57241.0 48946.0 45401.0 45742.0 52334.0 62819.0 75214.0 52354.0 True False 67153.10768164428 50408.106437427574 60930.846448838216 53597.813123848515 48973.80040364622 45456.50721086663 57624.43145061992 62601.09555106481 61557.03359064372 51890.18429079564 1.2941389320437624 0.9714381848200343 1.1742268269347085 1.0329085135539937 0.943797002708531 0.8760136012646572 1.110507357763257 1.2064149782210176 1.1862943720853734 1.0 15.663174039244666 -10.101193070131426 13.5299722986704 1.0000019307849362 1.0794860521603589 0.038640206114889164 0.12537516870668602 0.0 0.0 0.12678659852399496 0.030750266919247735 7.921490940678046e-11 10.101193070131426 0.07948412137542271 LSGINEIPRPFS(ph)PPVTSNTS(ph)PPPAAPLAR ddPTM_KYSE-520_SHP099_60min_R1 3 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 2 LSGINEIPRPFS(0.651)PPVT(0.195)S(0.195)NT(0.219)S(0.739)PPPAAPLAR;LS(0.005)GINEIPRPFS(0.989)PPVT(0.161)S(0.161)NT(0.161)S(0.523)PPPAAPLAR;LSGINEIPRPFS(0.996)PPVT(0.078)S(0.245)NT(0.192)S(0.489)PPPAAPLAR 75.414 0.0029558 2272030000.0 497240.0 453150.0 437660.0 431590.0 456140.0 455880.0 415400.0 450970.0 573810.0 408380.0 True False 469657.1059766342 431379.9938079828 465872.2638807595 472608.1838377353 492035.6229184201 453034.68381990073 457392.6859133173 449405.69032718963 469620.56857296865 404762.0709148319 1.1603288443384243 1.0657619001528227 1.150978061822364 1.1676197395906183 1.2156169223226252 1.1192617005737826 1.1300285248554323 1.1102959556251293 1.1602385754958349 1.0 18.626714580015406 -9.929007616729496 7.347415940252415 0.999999998091327 1.1411751023315846 0.5597594293548418 0.037831731906259915 1.2631901380051903e-09 1.551841099915118e-10 0.03825883766211656 0.00927913096727522 1.177585320650754e-10 9.929007616729496 0.1411751042402576 LSGINEIPRPFS(ph)PPVTSNTSPPPAAPLAR ddPTM_KYSE-520_SHP099_60min_R1 4 LSGINEIPRPFSPPVTSNTSPPPAAPLAR 29 1 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 LSGINEIPRPFS(0.989)PPVT(0.008)S(0.002)NTSPPPAAPLAR;LSGINEIPRPFS(0.979)PPVT(0.009)S(0.009)NT(0.003)S(0.001)PPPAAPLAR;LSGINEIPRPFS(0.989)PPVT(0.011)S(0.001)NTSPPPAAPLAR;LSGINEIPRPFS(0.968)PPVT(0.01)S(0.014)NT(0.007)S(0.001)PPPAAPLAR 181.32 3.1219e-11 4327510000.0 1078420.0 1452420.0 965283.0 1063107.0 984351.0 1295970.0 1020574.0 1243730.0 1493090.0 1322310.0 True False 1018597.8928230269 1382643.5630731336 1027506.6866874067 1164144.369645226 1061813.823508943 1287881.3705143374 1123743.579762392 1239415.7909187651 1221982.4937359306 1310595.3621416138 0.7772024243688451 1.0549736425236447 0.7839999410713476 0.8882561340236428 0.8101766984539434 0.9826689516204605 0.8574298461777771 0.9456891323752773 0.9323873172716841 1.0 20.321790900848878 -7.834983533455026 0.640267990127914 0.9995460796171104 0.8764846406717877 0.18765704487658408 0.08183173136613081 1.3015086688663597 1.2597769225860003 0.0772909106128857 0.03401286374025915 1.462232614863307e-08 7.834983533455026 -0.12306143894532273 LSGKPGVDDSWPT(ph)SDDEDLNFDTK ddPTM_KYSE-520_SHP099_60min_R1 1 LSGKPGVDDSWPTSDDEDLNFDTK 24 1 E7ESJ3;Q9UPS8 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 LSGKPGVDDSWPT(0.5)S(0.5)DDEDLNFDTK 157.16 2.8199e-07 794700000.0 322920.0 303420.0 301810.0 296790.0 282550.0 279460.0 292600.0 310670.0 374060.0 312210.0 True False 305006.98387493915 288843.247757295 321265.155513074 324996.8323668331 304785.07751041243 277715.7864795763 322178.8635008098 309592.3582809228 306140.133285242 309444.0622957042 0.9856611292268875 0.9334263699048678 1.0382010665503532 1.0502603603240792 0.9849440162117583 0.8974668456045267 1.0411538069615187 1.0004792335781738 0.9893230169422189 1.0 18.23931911378832 -6.212027864281869 0.0050726271374885975 1.3525341599874305 0.6309616408851316 0.006648934638167736 0.04517591868414133 97219.22050680657 188.15532146431255 13191.029733075027 13570.909836615238 6.137226275314038e-07 6.212027864281869 -0.7215725191022989 LSGKPGVDDSWPTS(ph)DDEDLNFDTK ddPTM_KYSE-520_SHP099_60min_R1 2 LSGKPGVDDSWPTSDDEDLNFDTK 24 1 E7ESJ3;Q9UPS8 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 LSGKPGVDDSWPT(0.171)S(0.829)DDEDLNFDTK;LSGKPGVDDSWPT(0.046)S(0.954)DDEDLNFDTK 202.14 2.4827e-16 1385600000.0 372420.0 372640.0 340260.0 337470.0 325680.0 327440.0 310780.0 354320.0 467630.0 375400.0 True False 351761.1201991354 354737.81505595695 362193.70403524867 369543.0473359446 351309.16313428164 325396.3255022988 342196.6753205114 353090.94661890954 382720.1799929893 372074.24805678066 0.9454057141451365 0.9534059852533033 0.9734446980054794 0.9931970547973807 0.9441910182417942 0.8745467529713087 0.9196999714645401 0.9489798029908961 1.028612385812264 1.0 18.505231016777863 -7.735935449297776 9.962483195311723 1.0142928330846728 0.9438609162753371 0.46078206212687456 0.03037469067425831 0.303789403890914 116.12347932052047 0.024085731515606234 0.008817888428794095 1.836811334729399e-08 7.735935449297776 -0.07043191680933569 LSGLANVVLHELS(ph)GDDDTDQNMR ddPTM_KYSE-520_SHP099_60min_R1 14 LSGLANVVLHELSGDDDTDQNMR 23 0 F8WF12;C9J8Q0;E7EU81;Q14789;Q14789-2 F8WF12 GOLGB1 Golgin subfamily B member 1 1 LSGLANVVLHELS(1)GDDDTDQNMR;LSGLANVVLHELS(1)GDDDTDQNMR;LSGLANVVLHELS(1)GDDDTDQNMR;LSGLANVVLHELS(1)GDDDTDQNMR;LSGLANVVLHELS(1)GDDDTDQNMR;LSGLANVVLHELS(1)GDDDTDQNMR;LSGLANVVLHELS(1)GDDDTDQNMR;LSGLANVVLHELS(1)GDDDTDQNMR;LSGLANVVLHELS(1)GDDDTDQNMR;LSGLANVVLHELS(1)GDDDTDQNMR;LSGLANVVLHELS(1)GDDDTDQNMR;LSGLANVVLHELS(0.987)GDDDT(0.013)DQNMR;LSGLANVVLHELS(0.998)GDDDT(0.002)DQNMR;LSGLANVVLHELS(1)GDDDTDQNMR 226.19 1.7219000000000003e-21 1162750000.0 602928.1 642107.5 601967.0 612711.9 559424.0 589222.8 495094.2 555753.7 746916.4 476708.3 True False 569482.476385631 611259.6918769934 640770.7560012547 670943.8547574508 603447.486112848 585545.2419441001 545143.1533897562 553825.9201285882 611295.2099901972 472485.0353354448 1.205292091380888 1.293712279041863 1.3561715357743214 1.4200319683799265 1.2771779865671837 1.239288439110854 1.1537786651861413 1.1721554731048673 1.2937874520326405 1.0 18.8499091110949 -6.408388306062603 2.289177623351005 1.1698134361762538 1.3202515443478953 0.4255375327701165 0.08436471887469597 0.3267611597210208 3.36740247840524 0.03479594482104761 0.0291357845178547 3.9049159809611973e-07 6.408388306062603 0.1504381081716415 LSGLS(ph)FK ddPTM_KYSE-520_SHP099_60min_R1 1 LSGLSFK 7 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 LSGLS(1)FK 125.57 0.0022711 2573300000.0 2079400.0 2122700.0 2110300.0 2657100.0 2950000.0 1977100.0 2509500.0 2482200.0 2281900.0 2669600.0 True False 1964051.5368188692 2020722.3057623424 2246333.314599381 2909629.985113754 3182148.21679603 1964760.1855319925 2763184.7503598193 2473589.827549837 1867564.4820178414 2645949.4209173718 0.742286122815574 0.7637040563918799 0.8489706178210161 1.0996544235168948 1.202648921268024 0.7425539467987239 1.0443074718343637 0.9348590747786191 0.7058201745104946 1.0 21.335354053129308 -5.002829594100905 5.023155198587559 0.9643131752708105 0.7614836616522006 0.26173072002647924 0.14153206908327412 0.24400566010971494 18.357052752875646 0.039313332679341235 0.07824998095346558 9.935057978785532e-06 5.002829594100905 -0.2028295136186099 LSGLS(ph)FKR ddPTM_KYSE-520_SHP099_60min_R1 2 LSGLSFKR 8 1 P49006 P49006 MARCKSL1 MARCKS-related protein 1 LSGLS(1)FKR;LSGLS(1)FKR 146.11 0.00032674 8018400000.0 4674100.0 5697800.0 5686100.0 6090400.0 6725900.0 4593900.0 5318000.0 5285900.0 6315000.0 6008100.0 True False 4414818.355412659 5424069.135427835 6052635.104081674 6669229.784854476 7255190.064863861 4565227.766079321 5855595.3386784205 5267564.446638329 5168355.188195216 5954872.908231073 0.741379106397101 0.9108622835477247 1.0164171758754867 1.1199617334630247 1.2183618654288046 0.7666373130766692 0.9833283478786883 0.8845804986630835 0.8679203180056623 1.0 22.505639287048933 -6.298262276542496 24.99880785477554 0.8984568220544669 1.0037884982105771 0.12790911908007685 0.13160816064990485 1339.2584072937382 909208.9696383729 0.049505654552428655 0.04366089224124956 5.031966294904775e-07 6.298262276542496 0.10533167615611028 LSGPS(ph)NSSMEDFTKR ddPTM_KYSE-520_SHP099_60min_R1 1 LSGPSNSSMEDFTKR 15 1 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LS(0.081)GPS(0.377)NS(0.301)S(0.241)MEDFTKR 53.278 0.045795999999999996 395160000.0 88310.0 76435.0 70135.0 61662.0 80727.0 60656.0 62241.0 51935.0 98364.0 77330.0 True False 83411.26825837945 72762.94786872598 74656.01431996761 67522.33794064364 87079.75562620105 60277.42340479921 68532.92769362245 51754.84960672012 80503.57715465307 76644.91636182969 1.0882818093845492 0.9493512593219166 0.9740504375727576 0.8809760796382156 1.1361452234497846 0.7864503774815033 0.8941614257896544 0.6752548252827738 1.0503446409231787 1.0 16.22590248476946 -6.280820284187854 24.989930692112935 0.8617531331264313 0.9939329168773312 0.2047617040749372 0.11851140602716613 1211.2231667583114 1561758.2548600002 0.039499478127147554 0.03488756821016366 5.238171530165696e-07 6.280820284187854 0.1321797837508999 LSGQNAMGS(ph)QDSLLEITFR ddPTM_KYSE-520_SHP099_60min_R1 2 LSGQNAMGSQDSLLEITFR 19 0 E9PIP8;H7C2G1;O75052-2;O75052-3;O75052 E9PIP8 NOS1AP Carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein 1 LSGQNAMGS(1)QDSLLEITFR;LSGQNAMGS(1)QDSLLEITFR 188.34 9.276e-13 74659000.0 95718.0 110995.0 91443.0 79645.0 80109.0 106944.0 84047.0 99829.0 128124.0 100410.0 True False 90408.33173089754 105662.63359310832 97337.56209397297 87214.43685385762 86413.12254213999 106276.5228271374 92543.29097967385 99482.71649926384 104859.91134320259 99520.44551779793 0.9084397809968525 1.0617178514761767 0.9780659801866083 0.8763469295187235 0.8682951738463243 1.067886325007772 0.9298922497601129 0.999620891784218 1.0536519485782423 1.0 16.602705323467312 -6.269040713491385 24.992870347265576 1.0051667065600163 0.9441515499826629 0.24527633371527457 0.06213475664458802 1117.5706423635206 3674518.7906785323 0.023163936831859876 0.02081940136971821 5.38219324092613e-07 6.269040713491385 -0.06101515657735335 LSGWEEEEESWLYS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 LSGWEEEEESWLYSSPK 17 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 LSGWEEEEES(0.002)WLY(0.026)S(0.541)S(0.431)PK 63.461999999999996 0.042357 15918000.0 103470.0 106840.0 99981.0 88976.0 96895.0 91163.0 85359.0 95104.0 111370.0 89678.0 True False 97730.31283766868 101707.24602989042 106425.9352352562 97432.25228839017 104520.08524286462 90594.01790180209 93987.92074355994 94774.10642144042 91148.01540923206 88883.52268842822 1.0995323979254508 1.144275597473948 1.1973640559715557 1.0961790143031191 1.175921949102408 1.0192442329200861 1.057427945031214 1.0662730678852708 1.0254770811541953 1.0 16.439628375219016 -6.265692728379862 24.996299923089833 1.0393104967124625 1.1432020960278027 0.7228994817722906 0.03364228084926189 202.29210316731016 1188836.4670074692 0.01139048386085197 0.010383861836364666 5.423845020480722e-07 6.265692728379862 0.1038915993153402 LSGWEEEEESWLYS(ph)SPKK ddPTM_KYSE-520_SHP099_60min_R1 2 LSGWEEEEESWLYSSPKK 18 1 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 LSGWEEEEESWLYS(0.621)S(0.379)PKK;LSGWEEEEESWLYS(0.635)S(0.365)PKK 165.06 1.5549e-08 342350000.0 291440.0 292770.0 251250.0 227000.0 255230.0 269710.0 228150.0 233340.0 313110.0 253280.0 True False 275273.2422287635 278704.8897432706 267445.97701421374 248574.01174996153 275315.148939949 268026.6398461556 251213.6285294254 232530.59800196526 256257.11686077673 251036.13624885833 1.0965482752486213 1.110218209648445 1.065368440617999 0.9901921510755884 1.096715210223847 1.0676815053449284 1.0007070387682797 0.9262833689069049 1.0207977253392027 1.0 17.937535527196808 -6.8286638240278 4.070987943556067 0.977573590500315 1.0704518894406418 0.5413363849940898 0.03807956076701966 0.1715876760940542 5.592973185264484 0.017116454654636445 0.011477853891179845 1.483666107797111e-07 6.8286638240278 0.09287829894032684 LSGWEEEEESWLYSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 LSGWEEEEESWLYSSPK 17 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 LSGWEEEEESWLYS(0.19)S(0.809)PK;LSGWEEEEESWLYS(0.153)S(0.847)PK;LSGWEEEEESWLYS(0.019)S(0.981)PK;LSGWEEEEESWLYS(0.013)S(0.987)PK;LSGWEEEEESWLYS(0.026)S(0.974)PK;LSGWEEEEESWLYS(0.017)S(0.983)PK;LSGWEEEEESWLYS(0.15)S(0.85)PK 240.63 2.7385e-23 749076000.0 1070560.0 1069894.0 916018.0 886201.0 945845.0 899725.0 852721.0 880113.0 1165680.0 961704.0 True False 1011173.9026915503 1018494.6862963657 975065.9859606203 970425.2765939544 1020277.6203781135 894109.4825389578 938922.3604349769 877060.0934229195 954021.8964014882 953184.0507543894 1.0608380426542654 1.068518388962013 1.0229566736758895 1.0180880343370409 1.0703888924396328 0.9380239648694526 0.9850378420535623 0.920137189379929 1.0008789967125822 1.0 19.862395286130695 -6.260310296666462 24.999913870320558 0.9648380621989239 1.0462185118297953 0.6536248451937701 0.028789177783313073 62.33986871078064 1380324.9792812443 0.009481034766280975 0.008969546998056088 5.491483756665266e-07 6.260310296666462 0.08138044963087143 LSHS(ph)DEKPYQCPVCQQR ddPTM_KYSE-520_SHP099_60min_R1 5 LSHSDEKPYQCPVCQQR 17 1 I3L2Z5;A0A087WWR2;P56270-3;P56270;P56270-2 I3L2Z5 MAZ Myc-associated zinc finger protein 1 LSHS(1)DEKPYQCPVCQQR;LS(0.004)HS(0.996)DEKPYQCPVCQQR;LS(0.003)HS(0.997)DEKPYQCPVCQQR;LSHS(1)DEKPYQCPVCQQR;LS(0.086)HS(0.913)DEKPY(0.001)QCPVCQQR 196.62 1.1229e-12 3551210000.0 1112337.0 1071659.0 1100366.0 1051061.0 1032357.0 1097409.0 1027180.0 1162064.0 1183215.0 1084049.0 True False 1050633.4492211635 1020174.8930470473 1171297.3530078502 1150953.5214269878 1113597.6225921682 1090559.6633678 1131017.3787107384 1158033.0712117762 968372.9824228666 1074445.1692373601 0.9778381245521368 0.9494899528201762 1.0901415786896187 1.0712073118109258 1.0364396941563787 1.0149979678738543 1.0526524862255495 1.0777963402578716 0.9012772453621031 1.0 20.03516043078906 -4.738984958728352 24.99463862579518 1.0352368550324478 0.9636639853011897 0.20911414397417483 0.05140302384686854 335.4200374303212 373359.7627083521 0.012764186951106362 0.03371412124932366 1.8239588718668727e-05 4.738984958728352 -0.07157286973125809 LSHS(ph)TPGK ddPTM_KYSE-520_SHP099_60min_R1 1 LSHSTPGK 8 0 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 1 LS(0.079)HS(0.546)T(0.375)PGK 51.927 0.043309 446380000.0 613060.0 625910.0 491450.0 537440.0 546870.0 546310.0 536940.0 514160.0 695960.0 655440.0 True False 579052.3396951884 595840.3440899361 523129.65334780153 588518.1360127714 589905.5577353373 542900.2766465946 591219.1352294085 512376.4989658465 569591.2077238861 649633.3115246032 0.8913525975695881 0.9171948752005619 0.8052691327051651 0.9059235811531854 0.9080592809363597 0.8357026448851271 0.9100813100884492 0.7887164803223635 0.8767887939538247 1.0 19.309266086546067 -6.219536010426636 24.943627839105453 0.8707914671904373 0.8839880942091813 0.0 0.058869537482622455 3560.018508499652 2119158.6927708643 0.018619876863946984 0.018619640818105455 6.032036899694409e-07 6.219536010426636 0.013196627018744023 LSHST(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 1 LSHSTPGK 8 0 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 1 LS(0.036)HS(0.166)T(0.798)PGK 92.428 0.018938999999999998 1036300000.0 894330.0 851150.0 760700.0 689380.0 642990.0 787120.0 703370.0 789400.0 906940.0 798960.0 True False 844719.7320973455 810259.4763978041 809735.939163035 754898.4679303445 693589.6548873484 782207.2921126604 774473.5038296817 786661.7556473446 742262.5580968761 791881.8359814737 1.0667244703881653 1.0232075539320242 1.0225464234312593 0.9532968602502528 0.8758751916915735 0.9877828440693774 0.9780165027649412 0.9934080059714223 0.9373400479339213 1.0 19.594925642921044 -5.138864641840801 3.44392638030591 0.958897860094328 1.0413682979996957 0.5016637683526143 0.03534690697645046 0.21576230924262543 4.702929404259266 0.010380965590540053 0.019592888406421444 7.263323008214845e-06 5.138864641840801 0.08247043790536768 LSKDPNIVIAK ddPTM_KYSE-520_SHP099_60min_R1 2 LSKDPNIVIAK 11 1 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ; 129.34 0.00047089 0.0 3035200.0 2919900.0 2248840.0 2022550.0 2911800.0 2966200.0 2030280.0 2537300.0 2647500.0 2411700.0 False True 2866831.4054788086 2779623.6211407436 2393803.8246712224 2214772.5438981703 3140942.094124295 2947686.845543975 2235520.5160233267 2528498.698510274 2166780.7380438363 2390334.2142742057 1.1993433338146335 1.162859822924277 1.0014515168532907 0.9265535048079699 1.3140179625793464 1.2331693316948995 0.9352334509013894 1.0578013247733309 0.9064760589145278 1.0 21.188780917892622 -6.774814086598554 24.999568063716108 0.9796944651676078 1.1325940640946677 0.3467555761261838 0.11040984411522416 325.0095991039267 607491.8052611835 0.04987724693962882 0.03384329348199767 1.679522836787366e-07 6.774814086598554 0.15289959892705984 LSKEDIER ddPTM_KYSE-520_SHP099_60min_R1 7 LSKEDIER 8 1 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PS65;E9PM13 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ;;;;;; 132.01 0.00085684 27931900000.0 48408500.0 49891600.0 34932000.0 26295490.0 42835100.0 40629300.0 27805710.0 32281210.0 42455700.0 33552900.0 False True 45723184.0050477 47494732.647181675 37183772.61317619 28794605.46357264 46205978.671620175 40375717.46802642 30616582.52437833 32169234.01700105 34746815.10110207 33255647.409761224 1.3748998310472522 1.428170441608693 1.1181190417078448 0.865856108852081 1.3894175056131297 1.2141010809543076 0.9206431060305181 0.9673314616499907 1.0448395327556654 1.0 24.987096021313235 -1.0000000000155878 0.3201011365493269 0.9964235537148565 5.285857680363929 0.40440304877777256 0.15192961006223507 60.08437302819245 0.858241718228143 0.15330145252444263 150.891838753091 0.0999999999964108 1.0000000000155878 4.2894341266490725 LSKEEIER ddPTM_KYSE-520_SHP099_60min_R1 4 LSKEEIER 8 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ;;; 112.11 0.0011652000000000001 4862920000.0 8561000.0 8839000.0 5887400.0 4774910.0 8630000.0 8031100.0 5771200.0 6777400.0 8442400.0 6857600.0 False True 8086104.264069604 8414361.172390506 6266911.224173065 5228716.010770958 9309131.902016848 7980974.9259147225 6354609.217484196 6753890.781257054 6909472.975584993 6796846.999132073 1.1896846089226614 1.2379800771541543 0.9220321165053917 0.7692855248085828 1.3696250486741255 1.1742172402783022 0.9349348629291864 0.993679978690045 1.0165703268688118 1.0 22.696434216623537 -4.745016257337232 24.972215190299718 1.0279563520305295 1.2138324692620956 0.20354827131599618 0.15105152137494865 419.0575206014423 637188.6295039384 0.04095102711808792 0.10766796457809132 1.7988035776309488e-05 4.745016257337232 0.18587611723156616 LSKPPFQTNPS(ph)PEMVSK ddPTM_KYSE-520_SHP099_60min_R1 2 LSKPPFQTNPSPEMVSK 17 1 Q4LE39-2;Q4LE39;Q4LE39-3;H0Y7Y8;Q4LE39-4 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 LSKPPFQTNPS(0.999)PEMVS(0.001)K;LSKPPFQTNPS(1)PEMVSK 138.22 8.6263e-06 5939200000.0 1344640.0 1423190.0 1011860.0 985220.0 1056570.0 1359570.0 1020560.0 1210480.0 1469390.0 1163090.0 True False 1270050.1387266146 1354817.8161482594 1077086.1146332438 1078855.012582806 1139716.047939042 1351084.4193231144 1123728.1645057634 1206281.127408155 1202585.8163075468 1152785.9274703274 1.1017224520719227 1.175255339142863 0.9343331567178312 0.935867611561016 0.9886623533304524 1.1720167527443133 0.9747934440626559 1.0464051465784436 1.0431995981652034 1.0 20.136693198488082 -4.7487785475816775 24.99999999752653 1.0144135488747559 1.138488926345658 0.36549164181849014 0.06664638262673703 259.6117921717074 512618.933454995 0.017860830612080283 0.04657717018642034 1.7832878573776113e-05 4.7487785475816775 0.12407537747090203 LSKS(ph)DEQLSSLDR ddPTM_KYSE-520_SHP099_60min_R1 6 LSKSDEQLSSLDR 13 1 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 LS(0.011)KS(0.989)DEQLSSLDR;LSKS(1)DEQLSSLDR;LS(0.005)KS(0.995)DEQLSSLDR;LS(0.007)KS(0.972)DEQLS(0.02)S(0.001)LDR;LS(0.001)KS(0.999)DEQLSSLDR;LSKS(1)DEQLSSLDR 211.09 2.4146999999999996e-11 4782260000.0 4225160.0 3643060.0 3478690.0 3561150.0 3772590.0 3723110.0 3554260.0 3706360.0 4610860.0 3677470.0 True False 3990781.9521523523 3468041.929255455 3702931.923500793 3899600.6253012107 4069471.3698991565 3699872.6894724686 3913559.287034824 3693503.502230924 3773644.054321743 3644890.476828369 1.094897632047634 0.9514804220600889 1.0159240578122746 1.0698814271902293 1.116486598368311 1.0150847365630429 1.0737110790885107 1.0133373075848513 1.0353244022864057 1.0 21.797444033832353 -5.186108322448191 8.876718046602388 1.0495685010703382 1.0136682543864703 0.05118295939389539 0.0459396125737483 0.9250851048409976 102.67240914925081 0.012202143202886932 0.0211863090906234 6.514658840963101e-06 5.186108322448191 -0.03590024668386782 LSLDLLSQMS(ph)PGDLAK ddPTM_KYSE-520_SHP099_60min_R1 2 LSLDLLSQMSPGDLAK 16 0 Q6UWE0-3;Q6UWE0-2;Q6UWE0 Q6UWE0-3 LRSAM1 E3 ubiquitin-protein ligase LRSAM1 1 LSLDLLSQMS(1)PGDLAK;LSLDLLS(0.001)QMS(0.999)PGDLAK 147.64 1.004e-05 120696000.0 298840.0 317680.0 259490.0 215680.0 261650.0 288640.0 228600.0 284720.0 359510.0 273790.0 True False 282262.749477229 302418.1759525988 276217.1405986795 236178.1623534437 282240.3664151458 286838.49069442844 251709.11892100197 283732.3727741478 294232.04650959023 271364.4336053971 1.0401611800302453 1.1144355652456588 1.0178826197995383 0.8703357297621422 1.0400786966267064 1.0570231584273597 0.9275685673938509 1.0455768613610412 1.0842690127087395 1.0 18.04987212067796 -4.911203168976699 7.284395094383572 1.0014168992906423 1.0760930290219206 0.1781239149613254 0.0623033474496727 0.37017792690892687 25.80473609376668 0.016756438921611758 0.03525687309505388 1.2268651523687926e-05 4.911203168976699 0.07467612973127835 LSLEGDHS(ph)TPPSAYGSVK ddPTM_KYSE-520_SHP099_60min_R1 1 LSLEGDHSTPPSAYGSVK 18 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LS(0.001)LEGDHS(0.509)T(0.044)PPS(0.423)AY(0.005)GS(0.017)VK 109.14 0.00013179 1218500000.0 348390.0 614760.0 404930.0 782940.0 371150.0 475290.0 338610.0 407170.0 516080.0 477860.0 True False 329064.1122017531 585226.0068264267 431032.4357109072 857350.3822005057 400357.39344537124 472323.53881012584 372840.0033151378 405757.6223041928 422372.8813180981 473626.5321694542 0.6947755031680118 1.2356275822340215 0.9100681791126776 1.8101823355912896 0.8453018702552991 0.9972489012527234 0.7872025277117352 0.8567037417553727 0.8917846713177408 1.0 18.8533903762591 LSLEGDHST(ph)PPSAYGSVK ddPTM_KYSE-520_SHP099_60min_R1 3 LSLEGDHSTPPSAYGSVK 18 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LSLEGDHS(0.006)T(0.994)PPSAYGSVK;LSLEGDHS(0.073)T(0.927)PPSAYGSVK;LSLEGDHS(0.142)T(0.858)PPSAYGSVK 141.1 9.1977e-06 2585200000.0 2663300.0 4477900.0 3287130.0 4605800.0 2695360.0 3726100.0 2730810.0 3160810.0 4004180.0 3905880.0 True False 2515561.439843078 4262774.962535071 3499023.6593939583 5043533.847215732 2907469.4974994347 3702844.0277733873 3006866.9249372794 3149845.8878485975 3277121.849163505 3871276.9419286535 0.6498014679853507 1.1011289108165367 0.9038422494389564 1.302808846505067 0.7510362965794294 0.9564916391459832 0.776711914451481 0.8136451964295166 0.8465221936643098 1.0 21.884378087612 LSLEGDHSTPPSAY(ph)GSVK ddPTM_KYSE-520_SHP099_60min_R1 2 LSLEGDHSTPPSAYGSVK 18 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8;H0YMD9;H0YNB8;H0YKN4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 LSLEGDHSTPPS(0.122)AY(0.871)GS(0.007)VK;LSLEGDHSTPPS(0.02)AY(0.918)GS(0.062)VK 156.72 3.6585999999999997e-07 1700590000.0 1043790.0 2013660.0 2548400.0 5016900.0 1231300.0 1487660.0 1208940.0 1125170.0 1574470.0 1754980.0 True False 985888.8879562219 1916920.7510347166 2712673.9415841647 5493704.667614018 1328196.3048613379 1478374.9621205437 1331151.4533173933 1121267.0478866517 1288585.9371587853 1739432.2425537813 0.5667877505298913 1.1020381847242018 1.5595168786807698 3.158332088606296 0.7635803639648077 0.8499181088824931 0.765279279498141 0.6446166860977819 0.7408083543782785 1.0 20.730185050963467 -5.908199648913209 22.789978600796292 0.7769905790291608 1.608975216033915 0.2877590741196374 0.6181033034818013 12.759870828126477 3159.581253107571 0.20312157161315428 0.23031830446042836 1.2353793883437493e-06 5.908199648913209 0.8319846370047542 LSLFPAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 LSLFPASPR 9 0 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 LSLFPAS(1)PR;LSLFPAS(1)PR;LSLFPAS(1)PR;LSLFPAS(1)PR;LSLFPAS(1)PR;LS(0.001)LFPAS(0.999)PR;LSLFPAS(1)PR;LSLFPAS(1)PR 128.33 0.00061215 4048380000.0 2931730.0 2827881.0 2623375.0 2221224.0 2483561.0 2450259.0 2307124.0 2548861.0 3080363.0 2524444.0 True False 2769101.09264114 2692025.352024084 2792481.9500484113 2432328.461124653 2679003.1211709003 2434966.0247035716 2540350.609280395 2540019.5960996323 2521046.728832076 2502079.3901477107 1.1067199160605634 1.0759152417882152 1.1160644866202893 0.9721228154079715 1.0707106783740963 0.973176964045023 1.0152957653076007 1.015163470072659 1.0075806302386134 1.0 21.254696135788453 -5.253813629946527 24.99814168946719 1.0098540766468675 1.097201421751939 0.7010875792885549 0.027444450790339497 314.07165296553956 1029561.8570561337 0.007004637566986252 0.011846727557885121 5.574249069836812e-06 5.253813629946527 0.08734734510507147 LSLGGIS(ph)PAGQETVDANLQK ddPTM_KYSE-520_SHP099_60min_R1 1 LSLGGISPAGQETVDANLQK 20 0 Q5HYI7-5;Q5HYI7 Q5HYI7-5 MTX3 Metaxin-3 1 LSLGGIS(1)PAGQETVDANLQK 147.06 1.4853e-06 68654000.0 100200.0 121050.0 91957.0 73742.0 85889.0 110680.0 75501.0 100040.0 130110.0 108750.0 True False 94641.706256252 115234.57630024578 97884.69535640217 80750.41750865919 92647.97565843855 109989.20506533871 83133.37789875138 99692.98458951151 106485.30380618827 107786.55960621971 0.8780473799517282 1.06909967922936 0.9081345180141907 0.7491696349124364 0.8595503557856613 1.0204352515486717 0.7712777752853914 0.9249110923822346 0.9879274762569158 1.0 16.71781776757044 -9.655231037547633 6.791184642470192 0.9999928079785204 0.906127574620556 0.0765249377789855 0.09615218253953202 1.4717439667946616e-10 0.0 0.09536188345270445 0.023128654007843617 2.2119176925905257e-10 9.655231037547633 -0.09386523335796437 LSLGQY(ph)DNDAGGQLPFSK ddPTM_KYSE-520_SHP099_60min_R1 1 LSLGQYDNDAGGQLPFSK 18 0 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 LSLGQY(1)DNDAGGQLPFSK 159.18 4.5813e-06 0.0 100260.0 106320.0 84371.0 71806.0 84998.0 91341.0 73445.0 82859.0 105170.0 86522.0 True False 94698.37793664512 101212.22761042649 89809.68965837308 78630.42065073882 91686.85902753517 90770.90693777631 80869.53735412497 82571.58146843607 86073.77911995101 85755.48239309738 1.1042836597029926 1.1802420648335512 1.047276362421839 0.9169142130214164 1.0691661508852432 1.0584851767457684 0.9430246918024954 0.9628723338052426 1.0037116778772766 1.0 16.387941286036085 -4.940642378965909 5.250137450330852 0.9946155956296977 1.1396445088476184 0.6068310505163232 0.047408434422644946 0.12944329047461411 7.234173117679373 0.012906975137362784 0.027563377820018983 1.14645660583392e-05 4.940642378965909 0.14502891321792066 LSLLS(ph)STSK ddPTM_KYSE-520_SHP099_60min_R1 2 LSLLSSTSK 9 0 Q92754-2;Q92754;C9JXZ2;H7C5E5;C1K3N0;A0A6E1XE14;P05549-2;P05549-5;P05549-6;P05549;Q6VUC0;Q92481;Q92481-2;Q7Z6R9 Q92754-2 TFAP2C;TFAP2A;TFAP2E;TFAP2B;TFAP2D Transcription factor AP-2 gamma;Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta;Transcription factor AP-2-delta 1 LSLLS(0.483)S(0.483)T(0.031)S(0.003)K;LS(0.001)LLS(0.492)S(0.492)T(0.015)S(0.001)K 68.786 0.031484 88320000.0 844680.0 945060.0 829380.0 664430.0 798520.0 800870.0 712940.0 885810.0 1022450.0 1021090.0 True False 797823.9165721668 899657.8990360191 882843.161854919 727577.2274318365 861358.9810427002 795871.4732623565 785010.9328238805 882737.3318596082 836798.8538670156 1012043.9369959997 0.788329327815854 0.8889514240917539 0.8723367924869142 0.7189186169045865 0.8511082864637575 0.7864001197662452 0.7756688263495652 0.8722322219327692 0.8268404397054584 1.0 19.94884049405033 -8.711246573825251 1.0267365039494536 1.0006237792832249 0.8167195141896294 0.5395563144619901 0.05017788771940295 2.832384149892042 3.4264409215734464 0.053037696817667686 0.015494049499025216 1.9442559028842034e-09 8.711246573825251 -0.18390426509359548 LSLLSS(ph)TSK ddPTM_KYSE-520_SHP099_60min_R1 1 LSLLSSTSK 9 0 Q92754-2;Q92754;C9JXZ2;H7C5E5;C1K3N0;A0A6E1XE14;P05549-2;P05549-5;P05549-6;P05549;Q6VUC0;Q92481;Q92481-2;Q7Z6R9 Q92754-2 TFAP2C;TFAP2A;TFAP2E;TFAP2B;TFAP2D Transcription factor AP-2 gamma;Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta;Transcription factor AP-2-delta 1 LSLLS(0.015)S(0.984)T(0.001)SK 226.93 2.1335e-09 540350000.0 1647100.0 1934400.0 1741200.0 1327500.0 1396000.0 1474400.0 1514500.0 1680000.0 1871000.0 2068500.0 True False 1555732.0795875543 1841468.5204064052 1853440.538018503 1453665.20087257 1505857.2578465252 1465197.7226990908 1667600.4400956144 1674172.4721149483 1531273.5640717729 2050174.6992686465 0.7588290305906743 0.8982007831153644 0.9040402940684401 0.7090445518575232 0.7345019223892021 0.7146696928909361 0.8133943125385817 0.8165999086381134 0.7468990640739153 1.0 20.967315419069486 -10.07629176311267 17.565377840957282 1.0 0.7905585360129265 0.47694088130021184 0.0664255143818555 0.0 0.0 0.0699519913107951 0.01696584993509983 8.388962188080613e-11 10.07629176311267 -0.20944146398707353 LSLPGLLSQVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 LSLPGLLSQVSPR 13 0 Q96Q42;Q96Q42-3 Q96Q42 ALS2 Alsin 1 LSLPGLLS(0.004)QVS(0.996)PR;LSLPGLLS(0.002)QVS(0.998)PR 115.56 0.00012964 598150000.0 371990.0 413390.0 405290.0 309590.0 339740.0 398100.0 338250.0 417750.0 537290.0 363550.0 True False 351354.9731563198 393530.1238889593 431415.6418869278 339013.3405183727 366475.60514382477 395615.310232303 372443.6110018765 416300.9227535834 439731.67997868627 360329.22983761976 0.9750942861744962 1.092140440747206 1.1972818360623776 0.9408432967570993 1.0170576650386505 1.097927332763386 1.0336203120954577 1.1553348667860972 1.2203608354971611 1.0 18.458956162091976 -7.26387389613499 24.92254445652533 1.1408858930663284 1.0541210023718504 0.13274797731275645 0.08432342635467689 372.2775235676734 3811014.25049887 0.04322391321327408 0.022375517118764107 5.446607802459442e-08 7.26387389613499 -0.08676489069447801 LSLS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 12 LSLSPLR 7 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 LSLS(1)PLR;LSLS(1)PLR;LSLS(1)PLR;LSLS(1)PLR;LSLS(1)PLR;LSLS(1)PLR;LSLS(1)PLR;LSLS(1)PLR;LSLS(1)PLR;LS(0.005)LS(0.995)PLR;LSLS(1)PLR;LSLS(1)PLR 197.66 5.2223000000000005e-05 63177380000.0 8976740.0 8495210.0 8363514.0 6648244.0 7108425.0 7404352.0 6661235.0 7396942.0 9051730.0 7801698.0 True False 8478782.33751245 8087087.360029831 8902639.494535536 7280091.11089255 7667817.6060943445 7358138.6926630745 7334617.641188712 7371283.734661246 7408164.007544307 7732581.025349204 1.0965009367140188 1.045845796315418 1.1513153842618147 0.9414826804952594 0.991624605155439 0.9515760220993973 0.9485342109114827 0.9532759773866524 0.9580454421697772 1.0 22.882518614904416 -5.27195657249104 24.99806351258456 0.9616094805721171 1.0926832157365531 0.8115791173553053 0.029630500632045535 263.6278357231768 626610.6329887381 0.00790634927290703 0.011868107064182242 5.346178161186242e-06 5.27195657249104 0.131073735164436 LSLS(ph)QSITDDDLEAIANDSEEEIIKPR ddPTM_KYSE-520_SHP099_60min_R1 1 LSLSQSITDDDLEAIANDSEEEIIKPR 27 1 P01583 P01583 IL1A Interleukin-1 alpha 1 LS(0.281)LS(0.325)QS(0.325)IT(0.07)DDDLEAIANDSEEEIIKPR 113.37 0.00028414 21361000.0 21954.0 15038.0 15103.0 16513.0 19559.0 22373.0 11888.0 15740.0 22236.0 14636.0 True False 20736.167855786018 14315.551907501818 16076.563545654406 18082.39055518551 21098.182024513033 22233.361808157024 13089.755055699343 15685.401613743616 18198.502923944387 14506.336426635698 1.4294558767926726 0.9868481942288632 1.1082442232716696 1.2465166961096854 1.4544114657215428 1.5326655300323386 0.9023474067280481 1.0812793218377994 1.2545209478617458 1.0 13.824395592511351 -6.777957061451873 24.99979561961003 1.0663102747542814 1.2759294595849553 0.29996561709577296 0.17344147924128445 389.4959257468831 589503.333425178 0.07876990122655939 0.05327608101348903 1.6674120608666063e-07 6.777957061451873 0.20961918483067388 LSLSPALQDALHTFPQLQVEQS(ph)GEGSPEEGAVR ddPTM_KYSE-520_SHP099_60min_R1 1 LSLSPALQDALHTFPQLQVEQSGEGSPEEGAVR 33 0 Q9ULL5;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 LSLSPALQDALHT(0.001)FPQLQVEQS(0.639)GEGS(0.359)PEEGAVR 56.048 0.031418 11095000.0 22538.0 28608.0 23281.0 22435.0 23121.0 21314.0 20815.0 24881.0 25308.0 23712.0 True False 21287.77221161088 27233.62873851656 24781.730510917045 24567.215654671283 24940.491159505396 21180.971419973142 22919.18333482353 24794.693618269044 20712.705162762402 23501.930127656848 0.905788252112946 1.1587826442590043 1.0544551182098079 1.0453275761279206 1.061210335663268 0.9012439108159707 0.9752043006822003 1.0550066944965888 0.881319323572828 1.0 14.520491624478097 -6.233047828602169 24.30008383138041 0.9667833466570181 1.0519587441504075 0.2381645812480705 0.07312324770709229 727.4072926895051 622581.5762882831 0.023149064606642025 0.023143905985149572 5.847256850941454e-07 6.233047828602169 0.08517539749338932 LSLSPALQDALHTFPQLQVEQSGEGS(ph)PEEGAVR ddPTM_KYSE-520_SHP099_60min_R1 3 LSLSPALQDALHTFPQLQVEQSGEGSPEEGAVR 33 0 Q9ULL5;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 LSLSPALQDALHTFPQLQVEQS(0.013)GEGS(0.987)PEEGAVR;LSLSPALQDALHTFPQLQVEQS(0.009)GEGS(0.991)PEEGAVR;LSLSPALQDALHTFPQLQVEQS(0.014)GEGS(0.986)PEEGAVR 238.67 3.1658e-31 513990000.0 304746.0 380719.0 302910.0 266538.0 314583.0 332250.0 224673.0 313098.0 389484.0 269440.0 True False 287841.1318839103 362428.6877691302 322436.0632731362 291869.69138242793 339338.89236757427 330176.3045081201 247385.1394371755 312011.93611562287 318763.5236926402 267052.97122114804 1.0778428360774441 1.3571415667530657 1.2073861668669663 1.0929280810762037 1.27068008573687 1.236370084175919 0.9263523199384833 1.1683522362207461 1.1936340653130961 1.0 18.026766410126022 LSLSQS(ph)ITDDDLEAIANDS(ph)EEEIIKPR ddPTM_KYSE-520_SHP099_60min_R1 2 LSLSQSITDDDLEAIANDSEEEIIKPR 27 1 P01583 P01583 IL1A Interleukin-1 alpha 2 LSLS(0.104)QS(0.895)ITDDDLEAIANDS(1)EEEIIKPR;LS(0.059)LS(0.359)QS(0.58)IT(0.003)DDDLEAIANDS(1)EEEIIKPR 226.44 6.148500000000001e-23 154244000.0 325300.0 329360.0 295290.0 294680.0 294660.0 214495.0 162900.0 171932.0 199453.0 171167.0 True False 307254.9605305267 313537.05122056114 314324.8658807054 322686.298601227 317848.0656139376 213156.25714211966 179367.52175079283 171335.60802123064 163237.36300096614 169650.5935459109 1.8111045420385001 1.848134124775176 1.852777873103301 1.9020640709630146 1.873545261295661 1.2564427432105343 1.057276122657669 1.0099322639555854 0.9621974175810402 1.0 17.372206951961353 -6.395420321987434 2.6564518526612138 1.010069799856989 1.865641776129154 0.9911101281024652 0.038416905544566005 0.027964106772175222 0.3839504343092778 0.01784301772012053 0.015191722573473298 4.023274623984342e-07 6.395420321987434 0.855571976272165 LSLSQSITDDDLEAIANDS(ph)EEEIIKPR ddPTM_KYSE-520_SHP099_60min_R1 12 LSLSQSITDDDLEAIANDSEEEIIKPR 27 1 P01583 P01583 IL1A Interleukin-1 alpha 1 LSLSQSITDDDLEAIANDS(1)EEEIIKPR;LSLSQSITDDDLEAIANDS(1)EEEIIKPR;LSLSQSITDDDLEAIANDS(1)EEEIIKPR;LSLSQSITDDDLEAIANDS(1)EEEIIKPR;LSLSQSITDDDLEAIANDS(1)EEEIIKPR;LSLSQSITDDDLEAIANDS(1)EEEIIKPR;LSLSQSITDDDLEAIANDS(1)EEEIIKPR;LSLSQSITDDDLEAIANDS(1)EEEIIKPR;LSLSQSITDDDLEAIANDS(1)EEEIIKPR;LSLSQSITDDDLEAIANDS(1)EEEIIKPR;LSLSQSITDDDLEAIANDS(1)EEEIIKPR;LSLSQSITDDDLEAIANDS(1)EEEIIKPR 279.72 4.0474999999999996e-42 8849400000.0 2388796.0 2534049.0 2053601.0 1936653.0 1924956.0 2130979.0 1480668.0 1692143.0 2145795.0 1816963.0 True False 2256284.7239332353 2412309.4823549055 2185979.4063377744 2120711.9188440447 2076439.0856985808 2117678.769614478 1630348.3713671137 1686273.350882147 1756172.7190900012 1800866.1213958238 1.2528886501481984 1.3395273827935423 1.2138489254511908 1.177606649182957 1.1530224601533203 1.1759223767134326 0.905313477774492 0.936367968083681 0.9751822738099035 1.0 20.780259502829605 -6.344168979972478 0.9885460822333718 0.9416583738055785 1.267448350955517 0.823364211397248 0.058971871984932665 0.21517584728980807 0.44188049645761796 0.0367560411903034 0.030865888088975973 4.527213959155025e-07 6.344168979972478 0.3257899771499385 LSLTS(ph)DPEEGDPLALGPES(ph)PGEPQPPQLK ddPTM_KYSE-520_SHP099_60min_R1 2 LSLTSDPEEGDPLALGPESPGEPQPPQLK 29 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 2 LS(0.058)LT(0.445)S(0.497)DPEEGDPLALGPES(1)PGEPQPPQLK;LS(0.265)LT(0.343)S(0.391)DPEEGDPLALGPES(1)PGEPQPPQLK 117.32 0.00019681 281320000.0 379520.0 375160.0 336390.0 333700.0 352630.0 320804.0 290850.0 266303.0 362610.0 275447.0 True False 358467.2690456366 357136.75047335913 358074.2376430298 365414.7476694366 380379.9748097565 318801.74323979806 320251.95642245567 265379.2570485877 296769.16465423105 273006.7538745236 1.3130344358088348 1.3081608619745078 1.3115947959573335 1.3384824458862454 1.3932987715922316 1.1677430639181998 1.173055068702243 0.9720611423794975 1.087039644413445 1.0 18.05857711664698 -6.754190551271696 1.5622519242283261 1.0234634420380555 1.3293505267492522 0.8726073645220295 0.05041790226670195 0.123764245730779 0.6154471832690896 0.02756650726648987 0.016696016247069415 1.7612031304643034e-07 6.754190551271696 0.30588708471119674 LSMEDS(ph)KSPPPKATEEK ddPTM_KYSE-520_SHP099_60min_R1 1 LSMEDSKSPPPKATEEK 17 2 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LSMEDS(0.629)KS(0.371)PPPKATEEK 160.3 3.6336e-08 2998300000.0 1591400.0 1504600.0 1685000.0 1150000.0 1226000.0 1205000.0 915710.0 934560.0 1817600.0 1130400.0 True False 1503121.8696227502 1432316.7575493585 1793617.7960953228 1259295.6542398923 1322479.2250142128 1197479.1480279444 1008278.9032683768 931318.2294879435 1487569.657967321 1120385.5354378917 1.34161127761728 1.2784141817660575 1.6008933883587715 1.1239842129412254 1.1803787028519024 1.0688098963718962 0.8999392364292715 0.8312479945788901 1.3277301526263627 1.0 20.095563832280927 -5.7161915771383836 1.6122236814561284 1.012154049415151 1.388220334504536 0.49682496529206144 0.15550453913484302 0.3054718021408513 1.644269923214354 0.055598412616672976 0.07806008090402368 1.9222435966444423e-06 5.7161915771383836 0.376066285089385 LSMEDSKS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 20 LSMEDSKSPPPK 12 1 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LS(0.216)MEDS(0.353)KS(0.431)PPPK;LSMEDS(0.001)KS(0.999)PPPK;LSMEDSKS(1)PPPK;LSMEDS(0.017)KS(0.983)PPPK;LSMEDSKS(1)PPPK;LSMEDS(0.001)KS(0.999)PPPK;LSMEDS(0.001)KS(0.999)PPPK;LSMEDSKS(1)PPPK;LSMEDS(0.004)KS(0.996)PPPK;LSMEDSKS(1)PPPK;LSMEDS(0.001)KS(0.999)PPPK;LSMEDS(0.082)KS(0.917)PPPK;LSMEDS(0.029)KS(0.971)PPPK;LSMEDS(0.002)KS(0.998)PPPK;LSMEDS(0.033)KS(0.966)PPPK;LSMEDS(0.349)KS(0.651)PPPK;LS(0.002)MEDS(0.235)KS(0.763)PPPK;LSMEDS(0.011)KS(0.988)PPPK;LS(0.012)MEDS(0.118)KS(0.87)PPPK;LS(0.001)MEDS(0.075)KS(0.924)PPPK 219.61 1.1868e-10 105145960000.0 46473830.0 39931800.0 38597060.0 34504830.0 36194740.0 37054140.0 35762260.0 37251520.0 47791420.0 37775900.0 True False 43895834.00661677 38013416.38914624 41085088.245079525 37784158.66894458 39043060.11810026 36822871.367724665 39377458.24682327 37122303.1716901 39113702.85165738 37441234.915205486 1.1723927938282284 1.0152821207750384 1.0973219323060899 1.0091589861957204 1.0427823816848587 0.9834844243550926 1.051713661047848 0.9914818049074053 1.044669144600588 1.0 25.15812468397958 -1.0000000005060508 1.0039005147858182 1.021679241584578 146.94608052800058 0.6222073583231292 0.03348773840918798 1149.5808227409038 1.5584410543623866 0.009982043331172438 385893.9772793198 0.0999999998834775 1.0000000005060508 145.924401286416 LSMEDSKS(ph)PPPKATEEK ddPTM_KYSE-520_SHP099_60min_R1 3 LSMEDSKSPPPKATEEK 17 2 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LSMEDS(0.176)KS(0.824)PPPKATEEK;LS(0.003)MEDS(0.019)KS(0.975)PPPKAT(0.002)EEK;LSMEDS(0.005)KS(0.948)PPPKAT(0.047)EEK 120.23 7.7948e-05 9596080000.0 5317320.0 5399220.0 5485650.0 4035870.0 4259730.0 3918790.0 3446940.0 3404150.0 6672840.0 3636640.0 True False 5022357.659785377 5139833.36680555 5839263.776350337 4419437.87137144 4594946.516451705 3894331.378008657 3795390.3340925607 3392341.798184586 5461220.4646075275 3604422.1988631105 1.3933877283769656 1.4259798334464624 1.6200276921477539 1.2261154846858389 1.2748080726783397 1.0804315263725177 1.052981622211095 0.9411610546773855 1.5151444984247626 1.0 21.78133657840332 -5.640403062961165 1.847246351538595 1.118958693452311 1.4703585629855318 0.4487896094779128 0.16355465769972102 0.3060840893799213 2.138567652623171 0.054166224502720614 0.07851342687212866 2.2887425151253723e-06 5.640403062961165 0.3513998695332208 LSMEDSKS(ph)PPPKATEEKK ddPTM_KYSE-520_SHP099_60min_R1 1 LSMEDSKSPPPKATEEKK 18 3 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 LSMEDS(0.057)KS(0.943)PPPKATEEKK 86.557 0.0020701 668030000.0 706620.0 890910.0 769080.0 513480.0 594880.0 574870.0 406380.0 388730.0 1046900.0 436550.0 True False 667422.3799879525 848109.3463168257 818656.1273715082 562280.9848166091 641693.6715958032 571282.0230928008 447460.8562865998 387381.5863602643 856809.3502013565 432682.50663076073 1.5425222183930636 1.960119333043845 1.8920481295772067 1.299523267522447 1.483058967630986 1.320326138307036 1.034155181754206 0.8953021682728787 1.9802264641416016 1.0 18.722949268163518 -5.26823610756928 23.057690811207493 1.2821090576772436 1.8144188512759438 0.3724145262437417 0.3035426720332934 182.50634684620042 619149.4177942607 0.0839125802537975 0.12800377936518778 5.392173930889918e-06 5.26823610756928 0.5323097935987002 LSNIFVIGK ddPTM_KYSE-520_SHP099_60min_R1 1 LSNIFVIGK 9 0 P62701 P62701 RPS4X 40S ribosomal protein S4, X isoform 0 103.7 0.021730000000000003 6107800.0 51239.0 55497.0 42617.0 43362.0 53668.0 60749.0 44194.0 50524.0 57932.0 46491.0 False True 48396.670527585855 52830.84081730472 45364.16000961094 47483.11144273929 57891.366270850565 60369.84295730262 48661.56081187558 50348.74403639027 47413.00914687653 46079.12590945065 1.0502948910682328 1.1465243702999435 0.9844839526417085 1.0304690140183559 1.2563468843704186 1.3101342910873446 1.056043487185491 1.092658401015023 1.0289476679754532 1.0 15.491825729618274 -7.6875004933208935 1.8073669670890873 1.0027257661949298 1.123696423034296 0.16358828654947433 0.09515528962532131 0.7063082331891758 4.311291302372702 0.09738437871721381 0.029399612832455773 2.0535226938320088e-08 7.6875004933208935 0.12097065683936625 LSNPPIDVKRT(ph)S(ph)IPLEIQK ddPTM_KYSE-520_SHP099_60min_R1 1 LSNPPIDVKRTSIPLEIQK 19 2 Q9BXD7;Q5XX13-3;Q5XX13-4;Q5XX13;Q5XX13-2 Q9BXD7 CDRT1;FBXW10 F-box/WD repeat-containing protein 10 2 LSNPPIDVKRT(1)S(1)IPLEIQK 46.982 0.06804199999999999 9223400000.0 3771400.0 3398500.0 3849000.0 3436100.0 3217400.0 3277900.0 3020200.0 2908600.0 4288400.0 1929500.0 True False 3562192.923900487 3235230.958747502 4097112.6986177466 3762665.9108988615 3470591.075498143 3257441.4102247353 3325511.290311508 2898510.745472343 3509734.661766643 1912406.1311282855 1.8626759587927364 1.6917070626827437 2.142386301700739 1.9675035807791286 1.8147772165165337 1.7033209406743026 1.7389147818457973 1.5156355641687227 1.8352454557839983 1.0 20.866957505375606 -11.092607566009407 0.22198091253844784 4.271284155985058e-09 1.9629644667390607 0.7539451314137225 0.14405385545818525 16.743683100615826 0.5308003759807456 8.822769138616048 0.31245060511910744 8.079647876985e-12 11.092607566009407 1.9629644624677764 LSNRPAFMPSEGK ddPTM_KYSE-520_SHP099_60min_R1 2 LSNRPAFMPSEGK 13 1 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ; 122.33 9.6425e-05 1405170000.0 1840990.0 1861920.0 1284080.0 1236860.0 1699450.0 1894940.0 1437660.0 1859100.0 1568800.0 1577450.0 False True 1738866.6147774188 1772470.5684011043 1366853.8514006431 1354410.8025244824 1833187.0464522042 1883112.976567699 1582992.7030094822 1852651.2160172015 1283945.4662297152 1563475.0202375285 1.112180618346716 1.1336737366816545 0.8742409272346328 0.8662823422140224 1.1725080495201645 1.2044407183951107 1.0124835270914585 1.184957349517321 0.8212126510563973 1.0 20.57632473871995 -7.768447219820961 24.99983579231757 0.9106063657277556 1.0648643719046367 0.21595923516798843 0.12122829696696762 303.03119825489625 1080989.4796975218 0.11450214787994636 0.03210224708039168 1.7043264349760306e-08 7.768447219820961 0.15425800617688112 LSPEELLLR ddPTM_KYSE-520_SHP099_60min_R1 1 LSPEELLLR 9 0 P13797;A0A0A0MSQ0;P13797-3;P13797-2;C9JAM8;P13796;Q14651 P13797 PLS3;PLS1;LCP1 Plastin-3;Plastin-2;Plastin-1 0 81.594 0.059965 0.0 22842.0 21833.0 16899.0 18828.0 19927.0 22813.0 17932.0 18062.0 18513.0 19790.0 False True 21574.908725601897 20784.109907998867 17988.336579356 20617.40745915539 21495.141530879453 22670.615604947317 19744.741559454986 17999.347137702487 15151.505874751858 19614.675996387028 1.0999370435471858 1.0596203532409736 0.9170855834003786 1.0511214899982575 1.0958703337663493 1.1557986279825976 1.0066310329618453 0.9176469262616379 0.7724576168142021 1.0 14.259645884107139 -7.23336698246487 3.273168015116801 0.8778557008490794 1.0581950816640375 0.4755642132208474 0.07749595983614614 0.21531480230071776 4.745836545294746 0.045415624717884004 0.022145432448577543 5.842961403613302e-08 7.23336698246487 0.18033938081495815 LSPEPWT(ph)PETGLVTDAFK ddPTM_KYSE-520_SHP099_60min_R1 2 LSPEPWTPETGLVTDAFK 18 0 O95573;O60488-2;O60488 O95573 ACSL3;ACSL4 Long-chain-fatty-acid--CoA ligase 3;Long-chain-fatty-acid--CoA ligase 4 1 LSPEPWT(0.875)PET(0.125)GLVTDAFK;LSPEPWT(0.999)PET(0.001)GLVTDAFK 116.43 0.00037823 163413000.0 261080.0 321510.0 218576.0 205193.0 204227.0 307140.0 219560.0 282840.0 333020.0 284970.0 True False 246597.37194992334 306064.1770036515 232665.75869396536 224694.48102647523 220298.5030073229 305223.02533220215 241755.26749910438 281858.8940553522 272551.96275103255 282445.38750330504 0.8730798336971878 1.0836225002968762 0.8237548531085246 0.7955324851033228 0.7799684921558334 1.0806443965335797 0.8559363267926458 0.9979235155753925 0.9649722559121037 1.0 18.10761241525724 -6.256887018342439 24.899776442315545 0.9720180809627957 0.8761546911941096 0.2478609151241089 0.09398308359935217 664.9889668003298 3637254.2624488585 0.03321778265095004 0.03214328032310966 5.534940819069404e-07 6.256887018342439 -0.09586338976868614 LSPFFTLDLS(ph)PTEDK ddPTM_KYSE-520_SHP099_60min_R1 3 LSPFFTLDLSPTEDK 15 0 A7KAX9;A7KAX9-2;G3V174 A7KAX9 ARHGAP32 Rho GTPase-activating protein 32 1 LSPFFTLDLS(0.975)PT(0.025)EDK;LSPFFTLDLS(0.999)PT(0.001)EDK;LSPFFTLDLS(0.994)PT(0.006)EDK 298.1 2.0811999999999996e-33 178327000.0 357900.0 372202.0 308360.0 287906.0 281301.0 387260.0 299822.0 369620.0 398780.0 358160.0 True False 338046.57354403863 354320.85723340773 328237.37899344484 315268.4996779047 303437.7883162503 384842.96669319685 330130.9337407381 368337.8744899562 326371.60442573 354986.9810442637 0.9522787921675563 0.998123526082854 0.9246462448506431 0.888112850647313 0.854785680938576 1.0841044523973975 0.9299803975052643 1.0376095298098489 0.9193903490929274 1.0 18.43740658996317 -6.25039889786267 24.998529228648202 0.9925527608427636 0.9258180011487239 0.2789669789457573 0.05668530371562808 1085.809613899136 2458557.3162222696 0.018915482097396914 0.018738766479236443 5.618250539123688e-07 6.25039889786267 -0.06673475969403964 LSPFVLSAGSGS(ph)PSATSILQK ddPTM_KYSE-520_SHP099_60min_R1 2 LSPFVLSAGSGSPSATSILQK 21 0 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2 Q9UMZ2-4 SYNRG Synergin gamma 1 LSPFVLSAGS(0.223)GS(0.737)PS(0.037)AT(0.002)SILQK;LSPFVLSAGS(0.043)GS(0.931)PS(0.025)AT(0.001)SILQK 174.82 2.102e-09 622630000.0 695980.0 915020.0 673940.0 603090.0 675080.0 874280.0 601620.0 811030.0 913190.0 805780.0 True False 657372.6019982672 871061.0657269789 717383.2507421252 660407.4922743794 728204.9553202239 868823.2942223005 662437.6208453778 808216.7262258258 747377.7156465543 798641.416087354 0.8231135885975203 1.090678555082227 0.8982545060794331 0.8269136548287213 0.9118046480581896 1.0878765823074596 0.8294556324047707 1.0119894985979847 0.9358113673944596 1.0 19.607188363881512 LSPHKVQGR ddPTM_KYSE-520_SHP099_60min_R1 2 LSPHKVQGR 9 1 Q9GZP8;Q9GZP8-2;K7EQZ3 Q9GZP8 IMUP Immortalization up-regulated protein 0 ; 112.71 0.00098614 3232500000.0 1357970.0 1291910.0 1280860.0 1175790.0 1166700.0 1234260.0 1217330.0 1009520.0 1404610.0 1175070.0 False True 1282640.6970539195 1229844.704403555 1363426.2850484587 1287536.7280858476 1258512.6523850576 1226556.5255145007 1340389.5963959037 1006018.2107437381 1149568.231336641 1164659.7939906255 1.1013007435064284 1.0559690570149913 1.1706648517304556 1.1055045728625978 1.0805839257770304 1.053145761400237 1.1508850939235673 0.8637871899884917 0.9870420849660531 1.0 20.151477163516336 -7.254668266004627 24.999231537168903 0.9440609762544094 1.1007703933798898 0.6737304884392326 0.04850011710519645 283.74393323018273 1047599.2357865274 0.022539120413291265 0.01263368396617689 5.5632904459150536e-08 7.254668266004627 0.15670941712548037 LSPLPPGS(ph)PGSAAR ddPTM_KYSE-520_SHP099_60min_R1 4 LSPLPPGSPGSAAR 14 0 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 LSPLPPGS(0.997)PGS(0.003)AAR;LSPLPPGS(1)PGSAAR;LSPLPPGS(0.973)PGS(0.027)AAR;LSPLPPGS(0.999)PGS(0.001)AAR 176.42 1.2698e-08 1829780000.0 1419480.0 1644720.0 1387370.0 1007280.0 1100350.0 1553150.0 1100420.0 1440910.0 1583940.0 1582180.0 True False 1340738.6147367726 1565705.1824249497 1476802.090070485 1103011.5883502264 1186941.2848649172 1543456.2147382589 1211661.192664257 1435911.8195209214 1296336.423878058 1568163.1161174118 0.8549739507050035 0.9984326033005115 0.9417401001796765 0.7033780969680973 0.7568991214406603 0.9842446865857142 0.7726627289029653 0.9156648340741944 0.8266591724766715 1.0 20.58064420184759 -6.144379200744789 0.005349307045412939 1.7392649802186468 0.00014240333683579977 0.03062341671705271 0.10113467317149545 79619.9211431462 154.99314787436123 24794.210699479634 25590.600044054325 7.171678284763508e-07 6.144379200744789 -1.739122576881811 LSPPYSS(ph)PQEFAQDVGR ddPTM_KYSE-520_SHP099_60min_R1 3 LSPPYSSPQEFAQDVGR 17 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 LSPPYS(0.173)S(0.827)PQEFAQDVGR;LSPPYS(0.218)S(0.782)PQEFAQDVGR;LSPPYS(0.059)S(0.941)PQEFAQDVGR 115.66 0.00013205 910650000.0 575230.0 570660.0 480414.0 477068.0 421623.0 594470.0 409264.0 594830.0 623150.0 567650.0 True False 543320.8452074238 543244.6370218769 511382.2551295777 522408.39928427566 454802.3313932853 590759.69222255 450636.3991517275 592766.6735643655 510001.66833315056 562621.0626250172 0.9656958853841259 0.9655604333177007 0.9089283873298754 0.9285262034927707 0.8083635000639989 1.050013466375124 0.8009589919175729 1.0535806654637103 0.9064745389261455 1.0 19.10180403771129 -7.299955699015515 24.999535040384306 0.9850206458344654 0.920981894013464 0.1419488910872463 0.07682493695600351 1167.980451283378 758087.5919008981 0.03908265859734716 0.018775323866258235 5.0123836073401056e-08 7.299955699015515 -0.06403875182100138 LSPS(ph)PSLR ddPTM_KYSE-520_SHP099_60min_R1 2 LSPSPSLR 8 0 Q5T200-2;Q5T200;A0A087WX14 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 LS(0.002)PS(0.499)PS(0.499)LR;LS(0.001)PS(0.849)PS(0.15)LR 120.33 0.00094694 474950000.0 1074410.0 987780.0 871170.0 781810.0 892890.0 977310.0 871360.0 930280.0 1082230.0 926760.0 True False 1014810.3355167639 940325.5661119922 927327.012121284 856112.987340253 963155.3631508497 971210.245775262 959445.572454088 927053.0758089841 885724.3127981803 918549.62740837 1.1047964151702803 1.0237068722841483 1.0095557000416828 0.9320269278816452 1.0485610514788755 1.0573301831447808 1.0445223032326554 1.0092574730280017 0.9642639726469605 1.0 19.808998143821107 -4.261979163701294 3.2465052105917596 1.0104981963712003 1.1180503012375447 0.3850507578883876 0.0363455816367586 0.38791646548577513 6.560622348694583 0.00994367614429051 0.10519350330847625 5.4704220790029146e-05 4.261979163701294 0.10755210486634437 LSPS(ph)PSSR ddPTM_KYSE-520_SHP099_60min_R1 4 LSPSPSSR 8 0 Q03252;P20700 Q03252;P20700 LMNB2;LMNB1 Lamin-B2;Lamin-B1 1 LS(0.024)PS(0.971)PS(0.005)SR;LS(0.155)PS(0.84)PS(0.005)SR;LS(0.006)PS(0.979)PS(0.013)S(0.002)R;LSPS(0.985)PS(0.015)SR 157.49 0.00026418 21439400000.0 10749300.0 10226600.0 9916600.0 7811800.0 8415100.0 9451000.0 8515500.0 9141400.0 11547900.0 9648400.0 True False 10153014.900801703 9735298.785560455 10555839.903121008 8554231.12329668 9077320.49463058 9392012.803329544 9376329.84327119 9109690.617018806 9451092.458869275 9562922.682341611 1.0617062626209166 1.0180254623973009 1.1038298911077535 0.8945205778033186 0.9492203164407345 0.9821278614614694 0.980487885841117 0.9526052776564095 0.9883058530130295 1.0 23.189020180721794 -5.253444841098196 24.99991390235036 0.9627601935423086 1.0568710299050486 0.634577896565617 0.03377773816385593 399.1800096353693 1248282.9093084699 0.009131984125522657 0.015457068215916287 5.5789845524493655e-06 5.253444841098196 0.09411083636273998 LSPS(ph)PTSQR ddPTM_KYSE-520_SHP099_60min_R1 12 LSPSPTSQR 9 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 LSPS(0.993)PT(0.005)S(0.002)QR;LS(0.001)PS(0.999)PTSQR;LSPS(1)PTSQR;LSPS(0.988)PT(0.012)SQR;LSPS(1)PTSQR;LSPS(1)PTSQR;LS(0.002)PS(0.998)PTSQR;LSPS(1)PTSQR;LSPS(0.999)PT(0.001)SQR;LS(0.003)PS(0.828)PT(0.164)S(0.005)QR;LS(0.028)PS(0.951)PT(0.02)S(0.001)QR;LS(0.002)PS(0.995)PT(0.002)SQR 217.74 5.7965e-09 296105800000.0 62894700.0 62186200.0 52867600.0 43472600.0 46982900.0 57872700.0 47594900.0 55527900.0 68034600.0 55914200.0 True False 59405805.61352388 59198681.60861078 56275530.087150835 47604222.83348626 50680186.93386639 57511495.012511864 52406256.97346105 55335286.67520932 55681231.65269769 55418843.6885894 1.0719423513658655 1.0682049221607928 1.015458395403833 0.8589898248506374 0.9144937635048728 1.037760645741393 0.9456396684843023 0.9984922635006677 1.0047346344067138 1.0 25.723873273584797 -5.001524292332475 8.72309439390365 0.963510852351332 1.063377335506508 0.42590579380323135 0.04849038230014051 0.1017938735095323 99.91617187171504 0.013724246257585256 0.02679047152862734 9.964963393910432e-06 5.001524292332475 0.09986648315517588 LSPT(ph)SLVHPVMSTLPELSCK ddPTM_KYSE-520_SHP099_60min_R1 1 LSPTSLVHPVMSTLPELSCK 20 0 C9JRJ5;Q9UGP4 C9JRJ5 LIMD1 LIM domain-containing protein 1 1 LS(0.405)PT(0.578)S(0.017)LVHPVMSTLPELSCK 186.7 9.3759e-13 859560000.0 249320.0 352360.0 259890.0 463360.0 262400.0 319550.0 282900.0 316710.0 356780.0 279940.0 True False 235489.72259290188 335432.0966968569 276642.9252387025 507397.59508573666 283049.3871482297 317555.5699189464 311498.29283793323 315611.40693067 291997.7456918903 277459.94939002424 0.8487341077896435 1.208938794353132 0.9970553438320814 1.8287237354479946 1.0201450255090634 1.1445095791917699 1.1226784028568442 1.1375025751446977 1.0523960172768227 1.0 18.08192001171415 -7.591250141256355 0.9371979923227622 1.0051083520534387 1.1920733287241514 0.050793061168260545 0.24379671152989218 1.7708030425610377 3.042078462959199 0.22941043591760257 0.08501298772668232 2.563007392022024e-08 7.591250141256355 0.18696497667071266 LSPVIS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 LSPVISPR 8 0 Q08499-7;Q08499-12;Q08499-6 Q08499-7 1 LSPVIS(1)PR 76.282 0.015578 223750000.0 236890.0 242880.0 254940.0 207810.0 198470.0 207800.0 188820.0 204640.0 230690.0 173750.0 True False 223749.23947149277 231211.68022968742 271373.8403184224 227560.1999196452 214088.459860172 206503.04312050363 207907.7683056152 203930.15160333525 188802.51122165538 172210.71017545435 1.2992759814039971 1.3426091791510575 1.575824407447929 1.3214056180814704 1.2431773821851795 1.199130082618619 1.2072870966840066 1.184189713842792 1.096345930106767 1.0 17.39381534444522 -6.8062759606717345 0.48088024322249634 1.0168578792833778 1.4171394302425233 0.7087471542999393 0.07951234311287023 0.5902141404684623 0.30093511763996234 0.08621660642376461 0.07885737029296165 1.562154698290639e-07 6.8062759606717345 0.4002815509591455 LSPYPSS(ph)PMR ddPTM_KYSE-520_SHP099_60min_R1 4 LSPYPSSPMR 10 0 A0A0A0MRE6;O94967-2;O94967;O94967-3;O94967-4 A0A0A0MRE6 WDR47 WD repeat-containing protein 47 1 LSPYPS(0.001)S(0.999)PMR;LSPYPS(0.013)S(0.987)PMR;LSPYPS(0.031)S(0.969)PMR;LSPYPS(0.002)S(0.998)PMR 147.58 0.00017918 1585640000.0 2848230.0 2684790.0 2427160.0 2086260.0 2418230.0 2736440.0 2191120.0 2611990.0 3026800.0 2740210.0 True False 2690233.004094261 2555808.6584480484 2583618.617193308 2284537.5231430586 2608530.9431534405 2719360.862929121 2412619.7928704526 2602929.6163330483 2477209.419418732 2715933.871251118 0.9905370055475551 0.9410423005883768 0.9512818572431376 0.841160952895612 0.960454512816175 1.0012618096906847 0.8883205215004218 0.9583921184111845 0.9121022590574286 1.0 21.373016921962957 LSQELEYLTEDVKR ddPTM_KYSE-520_SHP099_60min_R1 1 LSQELEYLTEDVKR 14 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 0 83.37 0.012861000000000001 26392000.0 72495.0 69386.0 48569.0 45315.0 75713.0 71528.0 58180.0 62491.0 63927.0 64801.0 False True 68473.55783480039 66052.59240949062 51699.83545314766 49621.72397554846 81671.18235195856 71081.56722003555 64061.40218208178 62274.233306509064 52319.46826852818 64226.91355441511 1.066119388981496 1.0284254489907683 0.8049559381262482 0.7726001644701072 1.2716037223673236 1.1067255654409263 0.9974230215469859 0.9695971651159655 0.8146034952185807 1.0 15.970890348472185 -7.535743201276793 23.28394914671908 0.9022344838548918 1.0033889717741111 0.07283244603948846 0.1403893000813852 314.13952346228336 568546.2429444575 0.10167290264108572 0.038500261226967175 2.9124387367001397e-08 7.535743201276793 0.10115448791921933 LSQMQS(ph)PIPLTETR ddPTM_KYSE-520_SHP099_60min_R1 1 LSQMQSPIPLTETR 14 0 H3BSW6;Q2VPK5-3;Q2VPK5-5;Q2VPK5 H3BSW6 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 1 LSQMQS(1)PIPLTETR 139.6 6.1451e-06 429550000.0 523160.0 564300.0 407950.0 340800.0 358490.0 560060.0 388460.0 628960.0 605910.0 547840.0 True False 494139.2719063961 537190.1809684312 434247.1097430789 373189.5295347437 386701.1234709179 556564.4577962917 427729.327804254 626778.2845603678 495892.0177481175 542986.5638130701 0.9100395936804612 0.9893249976501548 0.799738223159006 0.6872905416186668 0.7121743874385161 1.025005948375356 0.7877346444828517 1.1543163796888058 0.9132675664490928 1.0 19.050556973460772 -7.246656874703413 24.927020917959524 1.0253439913440343 0.8441330399426479 0.3299706425140947 0.1162501879186371 903.917312154898 1524235.3886892605 0.05762669323231489 0.033091237974508546 5.666868374289567e-08 7.246656874703413 -0.18121095140138643 LSQSSQDSS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 3 LSQSSQDSSPVR 12 0 O95251;O95251-4;O95251-2 O95251 KAT7 Histone acetyltransferase KAT7 1 LSQSS(0.002)QDS(0.246)S(0.752)PVR;LSQSSQDS(0.069)S(0.931)PVR;LSQSSQDS(0.001)S(0.999)PVR 222.45 5.895e-11 1391130000.0 3034320.0 2985800.0 2566130.0 2033740.0 2248470.0 2371990.0 1923240.0 2116750.0 2637420.0 2127120.0 True False 2866000.2208330403 2842357.6862228313 2731546.8457531678 2227026.038133771 2425411.7969557177 2357185.530564985 2117659.8682135954 2109407.4883031663 2158531.0119477133 2108275.3716743197 1.3594050660265322 1.3481909073222862 1.295630960951684 1.0563259752757743 1.150424574295311 1.1180634001776482 1.0044512669764873 1.0005369870767629 1.0238373226517758 1.0 21.007631885731318 -5.04208855023577 0.5824958366996037 1.003497786808583 1.4810396384922604 0.8832857152761796 0.04758732202256762 0.5736358024367927 0.27019929331422843 0.030309054495168616 0.16601811129685032 9.076354494769899e-06 5.04208855023577 0.47754185168367735 LSS(ph)AGPRS(ph)PYCK ddPTM_KYSE-520_SHP099_60min_R1 1 LSSAGPRSPYCK 12 1 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 2 LS(0.43)S(0.57)AGPRS(0.965)PY(0.035)CK 114.69 0.00051862 275460000.0 491490.0 537830.0 468020.0 478360.0 589500.0 466490.0 530110.0 555850.0 738590.0 508570.0 True False 464226.0699389751 511991.8395007119 498189.3180584762 523823.1905758221 635890.2962038167 463578.46287432103 583698.6921750316 553921.8860863651 604480.6743387334 504064.4654614734 0.920965673535376 1.0157269051528577 0.9883444523358367 1.0391988058437316 1.261525736835379 0.919680903215252 1.157984210691489 1.098910802171399 1.199213028804418 1.0 18.943248728110657 -5.527133425054265 24.985163701135594 1.1086020223918123 0.9848650829110648 0.2852923111930459 0.09309232961633035 154.6820331731069 908346.9973946307 0.026292069669831806 0.034084828896163925 2.970753209175819e-06 5.527133425054265 -0.12373693948074749 LSS(ph)ATANALYSSNLR ddPTM_KYSE-520_SHP099_60min_R1 6 LSSATANALYSSNLR 15 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 LS(0.009)S(0.991)ATANALYSSNLR;LS(0.01)S(0.99)ATANALYSSNLR;LS(0.005)S(0.995)ATANALYSSNLR;LS(0.037)S(0.963)ATANALYSSNLR;LS(0.001)S(0.999)ATANALYSSNLR;LS(0.007)S(0.947)AT(0.046)ANALYSSNLR 181.81 1.5293e-08 5592090000.0 3048870.0 3061270.0 2733130.0 2720420.0 2551620.0 5187670.0 4951380.0 6456530.0 6345600.0 6632380.0 True False 2879743.1033283365 2914201.9941400536 2909311.9329626146 2978967.8988759047 2752417.977268162 5155291.827261525 5451913.8112120265 6434133.804395428 5193398.999558446 6573622.273113559 0.4380755363913483 0.4433175307408952 0.44257363932543625 0.45316992292971126 0.41870643960266596 0.7842391322584695 0.8293621970812993 0.9787805774468293 0.7900361146090954 1.0 22.64825712942933 -6.387090710143243 2.635388808720633 0.896546925813341 0.436756836364689 0.9302065030808135 0.06039836054879778 0.06627479167182548 0.8961277990658517 0.022583943034098546 0.019315713582898013 4.1011843349549014e-07 6.387090710143243 -0.45979008944865196 LSS(ph)ATANALYSSNLRDDTK ddPTM_KYSE-520_SHP099_60min_R1 2 LSSATANALYSSNLRDDTK 19 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 LS(0.01)S(0.986)AT(0.004)ANALYSSNLRDDTK;LSS(0.999)ATANALYSSNLRDDTK 216.38 8.1501e-19 2174900000.0 670800.0 708930.0 664450.0 577050.0 634780.0 839580.0 814700.0 912280.0 1494440.0 994670.0 True False 633589.3867933528 674871.938674376 707281.5101575892 631892.6585035907 684733.5745958578 834339.8697936123 897057.8267057763 909115.5136077526 1223087.3677666595 985857.9976415489 0.6426781426017517 0.6845528872199247 0.7174273697120748 0.640957074969475 0.6945559870021181 0.8463083646829352 0.9099260023774137 0.922156655200459 1.2406323940087014 1.0 19.911020331129233 -6.861522329099086 1.0312101277450165 1.091932140642526 0.6692174496978337 0.8328754771939726 0.07489851350854099 0.20259361538831513 0.41550164499156733 0.05513811214024684 0.028763229326258716 1.375554084824378e-07 6.861522329099086 -0.4227146909446923 LSS(ph)FSCGQASATPFTDIK ddPTM_KYSE-520_SHP099_60min_R1 2 LSSFSCGQASATPFTDIK 18 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 LS(0.129)S(0.824)FS(0.016)CGQAS(0.03)AT(0.001)PFTDIK;LS(0.103)S(0.897)FSCGQASATPFTDIK 155.03 1.4441999999999999e-06 207570000.0 283360.0 323430.0 288870.0 245250.0 228900.0 362330.0 295180.0 421090.0 454380.0 452870.0 True False 267641.4559358441 307891.9373216727 307491.0224083417 268558.48626289883 246913.12773715617 360068.5640705108 325019.6750791834 419629.33707314474 371876.04598767066 448857.9241275284 0.5962720975820458 0.6859451972918611 0.6850520083967107 0.5983151278545695 0.5500919432738005 0.8021882754334733 0.7241036809385583 0.9348823191409688 0.828493886368405 1.0 18.775899339018192 -7.0767230850048515 0.94734155181193 0.9551857665358789 0.6299876615506782 0.7633224341590505 0.06884656187238292 0.2774187435751382 0.4542810820128342 0.05823851189812958 0.026499784035997995 8.380634781214085e-08 7.0767230850048515 -0.32519810498520074 LSS(ph)GFDDIDLPSAVK ddPTM_KYSE-520_SHP099_60min_R1 12 LSSGFDDIDLPSAVK 15 0 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 LS(0.038)S(0.962)GFDDIDLPSAVK;LS(0.011)S(0.989)GFDDIDLPSAVK;LS(0.003)S(0.997)GFDDIDLPSAVK;LS(0.016)S(0.984)GFDDIDLPSAVK;LS(0.009)S(0.991)GFDDIDLPSAVK;LS(0.107)S(0.893)GFDDIDLPSAVK;LS(0.003)S(0.997)GFDDIDLPSAVK;LS(0.111)S(0.889)GFDDIDLPSAVK;LS(0.022)S(0.978)GFDDIDLPSAVK;LS(0.007)S(0.993)GFDDIDLPSAVK;LSS(1)GFDDIDLPSAVK;LS(0.001)S(0.999)GFDDIDLPSAVK 467.53 4.096099999999999e-132 25703820000.0 10540480.0 9112760.0 8338330.0 6186690.0 6578110.0 7096630.0 7825910.0 7942010.0 9650270.0 10421000.0 True False 9955778.56247405 8674969.33106838 8875832.09359972 6774671.157503828 7095769.832673933 7052337.299808767 8617029.356321337 7914461.020989065 7898024.23150983 10328678.047415314 0.9638966881115458 0.8398915419034904 0.8593386349011857 0.6559088323213973 0.6869969031951387 0.6827918604330561 0.8342819203738946 0.7662607920061569 0.7646694180274367 1.0 23.30015228177547 -4.556666906651436 1.6312766441837663 0.759013909232274 0.9697798753422943 0.24507364916436203 0.0961712590615869 0.7369864074308311 2.883242878916953 0.02685018479765448 0.20690056515532415 2.7754479899133835e-05 4.556666906651436 0.2107659661100203 LSS(ph)LDDKIPHK ddPTM_KYSE-520_SHP099_60min_R1 1 LSSLDDKIPHK 11 1 Q96S53-3;Q96S53-2;Q96S53 Q96S53-3 TESK2 Dual specificity testis-specific protein kinase 2 1 LS(0.168)S(0.832)LDDKIPHK 75.462 0.018234 0.0 318270.0 350190.0 305480.0 286340.0 359520.0 333710.0 307370.0 350900.0 415810.0 321900.0 True False 300614.9286444849 333366.3467540938 325171.7295852816 313553.66750873957 387812.17861101904 331627.1921065606 338441.9592421187 349682.809800676 340309.3857170949 319048.2164344105 0.942224131524913 1.0448776378683404 1.0191930649834238 0.9827783117327018 1.2155284331161431 1.0394265663438869 1.0607862442374605 1.0960186949440707 1.0666393610354354 1.0 18.283414943424667 -3.094838370273952 0.7019138034712996 1.0739403910287817 0.4128826012009001 0.2576398869816041 0.06063525328153324 17.658861812332198 1.8973821598028915 0.02396101494337715 13.464768029178966 0.000803825223101503 3.094838370273952 -0.6610577898278815 LSS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 3 LSSLPR 6 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ES05 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 LS(0.272)S(0.728)LPR;LS(0.227)S(0.773)LPR;LS(0.272)S(0.728)LPR 108.09 0.0095398 2177150000.0 3041650.0 2894820.0 3107290.0 2944250.0 3007210.0 3458180.0 3650630.0 4082690.0 4278570.0 3862870.0 True False 2872923.6111210496 2755748.501986592 3307590.8852397827 3224070.63477896 3243860.318315657 3436596.21587326 4019671.3071153867 4068528.101297006 3501689.541972514 3828647.9770673825 0.7503754924268629 0.719770665387055 0.8639057194736633 0.8420911648420839 0.8472600086885884 0.8976004679609063 1.0498931558064843 1.0626540036238494 0.9146021161900322 1.0 21.86840358780789 -5.950851456097533 0.7367035407001268 1.016777095118163 0.7461722551469328 0.7550096342265666 0.05448714905073767 0.35761321919293665 0.4310021390484878 0.03663585021702257 0.0513397478608962 1.1198208358639928e-06 5.950851456097533 -0.2706048399712302 LSS(ph)LQDLEK ddPTM_KYSE-520_SHP099_60min_R1 1 LSSLQDLEK 9 0 A0A0A0MRF6;Q99996-5;Q99996-3;Q99996;Q99996-1;Q99996-6;A0A087WX84;A0A6I8PUA5;A0A0A0MRE9;Q99996-4 A0A0A0MRF6 AKAP9 A-kinase anchor protein 9 1 LS(0.003)S(0.997)LQDLEK 130.1 0.00057955 59110000.0 286970.0 260930.0 223070.0 206780.0 264090.0 227750.0 219050.0 269340.0 324900.0 234490.0 True False 271051.20203948754 248394.53113608537 237449.4491246197 226432.3090293259 284872.38053344475 226328.52777042682 241193.71172198365 268405.72240442864 265906.35006249044 232412.6010304596 1.1662500261935627 1.0687653338707361 1.0216720094858367 0.9742686413102449 1.2257183098953823 0.9738221024460054 1.037782420800726 1.1548673403007603 1.1441133091903275 1.0 17.826328765861334 -7.248883182875706 24.56338748191882 1.1121177483157767 1.0641954984943296 0.023984348972235003 0.08408766407706776 1826.1855732170745 3572535.4639128568 0.03938318793045684 0.0225422852139356 5.637892842459377e-08 7.248883182875706 -0.047922249821447105 LSS(ph)LRAS(ph)TSK ddPTM_KYSE-520_SHP099_60min_R1 5 LSSLRASTSK 10 1 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 2 LS(0.372)S(0.628)LRAS(0.955)T(0.043)S(0.002)K;LS(0.039)S(0.961)LRAS(0.786)T(0.026)S(0.188)K;LS(0.422)S(0.578)LRAS(0.977)T(0.02)S(0.003)K;LS(0.425)S(0.575)LRAS(0.394)T(0.283)S(0.323)K;LS(0.434)S(0.566)LRAS(0.967)T(0.029)S(0.005)K 115.68 0.00038951 25970200000.0 37100000.0 28146500.0 25534400.0 27275100.0 26700900.0 25104700.0 25216300.0 29665000.0 33292700.0 21921300.0 True False 35041989.042983554 26794299.891242165 27180388.280484542 29867317.303442135 28802108.922660664 24948012.255184352 27765409.691372074 29562099.03886308 27247584.920669336 21727094.33651333 1.6128244532032967 1.2332205805455163 1.2509904849451827 1.3746576896501437 1.3256309599695282 1.1482443012758559 1.277916377649776 1.3606098717573425 1.2540832427315687 1.0 24.37299191343865 -13.999999999999998 0.11049336572785882 0.07622909781824125 1.4738642962994213 0.472556429440946 0.10957328508590827 166.78869541600875 1.221749597865285 35.4098955674788 1.3886696958751152 1.0000000000000041e-14 13.999999999999998 1.3976351984811801 LSS(ph)LRAS(ph)TSKS(ph)ES(ph)SQK ddPTM_KYSE-520_SHP099_60min_R1 3 LSSLRASTSKSESSQK 16 2 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 4 LS(0.45)S(0.55)LRAS(0.985)T(0.017)S(0.184)KS(0.798)ES(0.605)S(0.41)QK;LS(0.443)S(0.557)LRAS(0.957)T(0.043)SKS(0.997)ES(0.664)S(0.338)QK;LS(0.457)S(0.543)LRAS(0.875)T(0.12)S(0.007)KS(0.984)ES(0.631)S(0.383)QK 146.25 3.3852e-05 3764580000.0 3627120.0 2497810.0 2439050.0 2685600.0 2276760.0 2542390.0 2210060.0 2744020.0 2988800.0 2305100.0 True False 3425916.4231155403 2377811.458310754 2596275.0656179837 2940838.6165449205 2455928.0590076325 2526522.0009583123 2433474.4329070393 2734501.635079083 2446109.2615166805 2284678.607340661 1.4995178805929588 1.0407640928885393 1.1363852479189698 1.2872001370766202 1.0749555981820584 1.105854448341491 1.0651276836436854 1.1968867858670111 1.0706579269650198 1.0 21.12355980059994 -4.254212626676834 24.9681832136401 1.1187470508697597 1.4995180621434105 0.6869338901974684 0.07889682680394362 498.98644919944496 1723938.3985443858 0.019270677249163985 0.19279204884950207 5.569130225623964e-05 4.254212626676834 0.3807710112736509 LSS(ph)LRAS(ph)TSKS(ph)ESSQK ddPTM_KYSE-520_SHP099_60min_R1 6 LSSLRASTSKSESSQK 16 2 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 3 LS(0.261)S(0.739)LRAS(0.88)T(0.123)S(0.25)KS(0.687)ES(0.054)S(0.005)QK;LS(0.02)S(0.98)LRAS(0.995)T(0.057)S(0.123)KS(0.684)ES(0.139)S(0.003)QK;LS(0.087)S(0.913)LRAS(0.999)T(0.008)S(0.276)KS(0.705)ES(0.01)S(0.002)QK;LS(0.447)S(0.553)LRAS(0.934)T(0.066)S(0.016)KS(0.947)ES(0.03)S(0.007)QK;LS(0.042)S(0.958)LRAS(0.982)T(0.021)S(0.175)KS(0.691)ES(0.115)S(0.016)QK;LS(0.099)S(0.901)LRAS(0.978)T(0.022)S(0.11)KS(0.418)ES(0.418)S(0.053)QK 157.3 7.493000000000001e-07 7761780000.0 14519100.0 11319800.0 10828700.0 11689000.0 10909700.0 11293200.0 10484100.0 12204700.0 14957800.0 9131960.0 True False 13713696.579891715 10775979.816633796 11526735.328532588 12799919.045574017 11768231.322298186 11222714.949800158 11543935.142955715 12162364.744298391 12241840.5754531 9051057.938957365 1.5151484690939303 1.1905768242021808 1.2735235379412904 1.414190377732628 1.3002050590843777 1.2399340525150762 1.2754238477767954 1.3437506230016942 1.3525314563242423 1.0 23.109655001750244 -10.319747417158705 3.6975625782453863 0.9990351710778465 1.3162781490358146 0.5494481841731629 0.08751563686911076 8923621.578288011 4981494.939777213 65826.63003433179 0.020494636937879618 4.7890854143035604e-11 10.319747417158705 0.3172429779579682 LSS(ph)LRASTS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 LSSLRASTSK 10 1 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 2 LS(0.024)S(0.976)LRAS(0.026)T(0.135)S(0.839)K 138.97 0.0008329 7121900000.0 12968000.0 10135000.0 8466500.0 9194900.0 9156900.0 8806300.0 8525600.0 9775600.0 11245000.0 7492400.0 True False 12248639.188932914 9648099.387054855 9012264.136878958 10068780.531452497 9877495.934365941 8751336.615168868 9387450.849837678 9741690.725242186 9203191.463381665 7426023.164998999 1.6494210853885163 1.2992282911975208 1.2136057128607372 1.3558778780693252 1.3301191923183655 1.1784688009615234 1.264128947790448 1.311831448514408 1.2393162879909903 1.0 22.824158384917723 -1.0000000000000053 0.03137464002661353 5.249823223796623e-07 3.1800912491705535 0.5608412292928051 0.10287121007866035 1069.074373937597 2.575556717325246 81.54389583633707 205.70631577829388 0.09999999999999877 1.0000000000000053 3.180090724188231 LSS(ph)PAAFLPACNS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 4 LSSPAAFLPACNSPSK 16 0 Q86YS7;Q86YS7-3;H0YFE9;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 2 LS(0.414)S(0.586)PAAFLPACNS(0.999)PS(0.001)K;LS(0.099)S(0.901)PAAFLPACNS(0.994)PS(0.006)K;LS(0.095)S(0.905)PAAFLPACNS(0.999)PS(0.001)K;LS(0.05)S(0.95)PAAFLPACNS(0.994)PS(0.006)K 283.08 3.3448e-37 934320000.0 2048420.0 1847270.0 1724130.0 1746490.0 1898970.0 1836750.0 1770680.0 1758550.0 2181500.0 1948110.0 True False 1934790.0591759682 1758524.3763911999 1835270.178505536 1912475.884498634 2048408.135338696 1825286.1619421802 1949677.614571476 1752450.0004986562 1785394.591139805 1930851.2610066442 1.0020399283201495 0.9107508236933786 0.9504979568176176 0.9904832770503357 1.0608834438499233 0.9453271719078828 1.0097502868009711 0.9076048662521115 0.9246670767426147 1.0 20.880805602969062 -9.869811236984605 13.093577934025856 0.9999999999999981 0.967097421196355 0.04357678653154362 0.04652642828946057 0.0 0.0 0.04675871123242201 0.011340653254648878 1.3495493271759196e-10 9.869811236984605 -0.03290257880364311 LSS(ph)PIDMTSK ddPTM_KYSE-520_SHP099_60min_R1 4 LSSPIDMTSK 10 0 Q16649 Q16649 NFIL3 Nuclear factor interleukin-3-regulated protein 1 LS(0.028)S(0.972)PIDMTSK;LS(0.027)S(0.973)PIDMTSK;LSS(1)PIDMTSK;LSS(1)PIDMTSK 248.69 6.2949e-14 1998600000.0 2454380.0 2835480.0 2307560.0 2580900.0 3209650.0 5628000.0 6338200.0 8999900.0 9493600.0 7892300.0 True False 2318230.648714771 2699259.2846577484 2456309.009826545 2826187.960024117 3462231.1945896144 5592873.564399397 6978927.110870936 8968681.44749245 7769801.554180539 7822380.362116482 0.29635872220454557 0.3450687846541147 0.31401042855476125 0.36129513385864587 0.4426058353486722 0.7149835862604548 0.8921743494690745 1.1465412102596628 0.9932784132831766 1.0 22.899176257938834 -6.495016253211655 1.355520641908151 1.0578435235572257 0.32187883535782585 0.9765991818710873 0.04854479461318248 0.05465050646492091 0.20404655857418896 0.02478962121345999 0.018361194680699463 3.1987753951922103e-07 6.495016253211655 -0.7359646881993998 down LSS(ph)PISK ddPTM_KYSE-520_SHP099_60min_R1 6 LSSPISK 7 0 A0A494C142;Q99728-3;Q99728-2;Q99728 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 LS(0.03)S(0.969)PIS(0.001)K;LS(0.004)S(0.996)PISK;LSS(1)PISK;LS(0.001)S(0.999)PISK;LSS(1)PISK;LSS(1)PISK 179.28 0.00027632 11019890000.0 43612000.0 40464900.0 35530100.0 33485400.0 36444300.0 36948800.0 35252200.0 40657500.0 45100000.0 40509200.0 True False 41192755.42163336 38520905.464946814 37820427.09616999 36667842.34824739 39312259.07029815 36718188.833738565 38815836.40431738 40516468.62203185 36910976.87848052 40150320.003680706 1.0259633153075018 0.9594171468973468 0.9419707512344329 0.9132640124633111 0.9791269177106003 0.91451796225715 0.9667628153588567 1.0091194445851883 0.9193196187501562 1.0 25.258908150481734 -6.9936061917981425 24.99437338342157 0.9761199501981784 0.9532433316841316 0.054615598151797395 0.03755907929066633 468.34161288490765 1830816.1947889074 0.015554889192938242 0.010454180956636212 1.0148311941224105e-07 6.9936061917981425 -0.022876618514046876 LSS(ph)PKPK ddPTM_KYSE-520_SHP099_60min_R1 2 LSSPKPK 7 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 LS(0.1)S(0.9)PKPK;LS(0.009)S(0.991)PKPK 124.74 0.0036083 2590500000.0 6643800.0 5426800.0 4539200.0 4933500.0 5522200.0 5070900.0 4679500.0 4603100.0 5887100.0 4863000.0 True False 6275255.169913048 5166088.382207133 4831804.0949767865 5402378.35668914 5956765.72298 5039250.632145158 5152549.52751893 4587132.920471619 4818151.041714022 4819917.603356746 1.3019424160991377 1.0718208914213185 1.0024661192572593 1.1208445457504812 1.23586463777545 1.045505555662541 1.0690119523890882 0.9517035970235241 0.9996334871696783 1.0 22.200577053073047 -6.823921680514589 1.8960575649359874 0.9848296039078833 1.1312154050757404 0.3965217077640383 0.08218648237558215 0.39111155878143516 2.8639165099557093 0.045828086161648074 0.02742653127691597 1.4999553089733549e-07 6.823921680514589 0.14638580116785704 LSS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 10 LSSPVK 6 0 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 LS(0.005)S(0.995)PVK;LS(0.02)S(0.98)PVK;LSS(1)PVK;LSS(1)PVK;LSS(1)PVK;LSS(1)PVK;LSS(1)PVK;LSS(1)PVK;LS(0.002)S(0.998)PVK;LS(0.005)S(0.995)PVK 155.38 0.0067874 156862400000.0 214742100.0 196534100.0 161680700.0 161260900.0 159411100.0 183304600.0 189146500.0 194309000.0 193271000.0 215505600.0 True False 202829927.6352369 187092306.83230165 172102896.62026656 176587087.4511426 171955846.64491305 182160527.99801114 208267274.1119482 193634987.43106166 158177858.36542785 213596388.04481986 0.9495943704472952 0.8759151245246865 0.8057387964077064 0.8267325541763776 0.8050503485519184 0.8528258818673825 0.9750505428408581 0.9065461696404266 0.7405455673353273 1.0 27.670312010085578 -6.561701655211404 24.987928492831077 0.9000607061803216 0.8477676788362072 0.10319208887539044 0.07502873207583698 406.2645381634299 261484.37276464712 0.028998382603015942 0.022462071395903376 2.743458182457658e-07 6.561701655211404 -0.05229302734411445 LSS(ph)PVKR ddPTM_KYSE-520_SHP099_60min_R1 2 LSSPVKR 7 1 P26358;P26358-2;P26358-3 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 LS(0.181)S(0.819)PVKR;LS(0.065)S(0.935)PVKR 98.23299999999999 0.0059283999999999995 979030000.0 3582200.0 3335500.0 3040170.0 3081200.0 3230100.0 3235400.0 3318900.0 3548100.0 3563700.0 3525900.0 True False 3383488.2250613365 3175257.573312426 3236144.2226439873 3374036.3216034407 3484290.493245034 3215206.668489309 3654406.8013425823 3535792.469232767 2916621.913566319 3494663.2691086903 0.9681871941625698 0.9086018677050598 0.9260246190956652 0.9654825262932942 0.9970318239369879 0.9200333253593682 1.0457107079946601 1.0117691453959645 0.8345931178399915 1.0 21.73672201966278 -5.31589166716797 5.717516505328564 0.9710135668197707 0.9317208707433237 0.0668202219656846 0.05646357127576442 0.540370212809251 39.80490203025666 0.015844050030319596 0.02400419228928787 4.831793139451026e-06 5.31589166716797 -0.03929269607644703 LSS(ph)PVLHR ddPTM_KYSE-520_SHP099_60min_R1 9 LSSPVLHR 8 0 Q16643;Q16643-2;Q16643-3;D6R9W4;D6RCR4 Q16643 DBN1 Drebrin 1 LS(0.017)S(0.983)PVLHR;LS(0.131)S(0.869)PVLHR;LS(0.206)S(0.794)PVLHR;LS(0.032)S(0.968)PVLHR;LS(0.318)S(0.682)PVLHR;LS(0.126)S(0.874)PVLHR;LS(0.001)S(0.999)PVLHR;LS(0.002)S(0.998)PVLHR;LS(0.324)S(0.676)PVLHR 187.14 6.7328999999999995e-06 155333900000.0 65515600.0 63674680.0 58793090.0 62890400.0 58507170.0 56589020.0 54099800.0 56389400.0 70134700.0 52466630.0 True False 61881319.06588932 60615652.79515675 62582986.65366998 68867484.70731173 63111351.41873972 56235826.93554887 59568735.74716719 56193798.33278485 57400006.431910515 52001816.47662046 1.1899837978488808 1.1656449120851191 1.2034769339606959 1.324328444147214 1.2136374398981622 1.0814204338579594 1.1455125951984533 1.0806122197298447 1.1038077190576032 1.0 25.632058683158366 -6.246370725858979 8.270846145353968 1.0912084238545388 1.2215249798900927 0.6357152837647275 0.051676853648426765 0.1454608074708608 65.48752162082147 0.018035076233263385 0.01749034787378383 5.670603402554445e-07 6.246370725858979 0.13031655603555392 LSS(ph)SKENLDASK ddPTM_KYSE-520_SHP099_60min_R1 5 LSSSKENLDASK 12 1 Q8NFA0;K7EQL6;K7EN13 Q8NFA0 USP32 Ubiquitin carboxyl-terminal hydrolase 32;Ubiquitin carboxyl-terminal hydrolase 1 LS(0.087)S(0.907)S(0.006)KENLDASK;LS(0.002)S(0.6)S(0.399)KENLDASK;LSS(0.606)S(0.394)KENLDASK;LS(0.042)S(0.58)S(0.378)KENLDASK;LS(0.074)S(0.529)S(0.397)KENLDASK 177.3 6.9547e-07 5162090000.0 5489310.0 4824040.0 4477130.0 4015780.0 4438480.0 4459080.0 4408600.0 4556560.0 5483000.0 4429000.0 True False 5184807.03163181 4592285.87736834 4765732.963461279 4397438.5238117175 4787763.124503337 4431249.22770826 4854264.311789717 4540754.356869095 4487425.415182003 4389762.505709854 1.1811133346935796 1.0461353823572597 1.0856471067084819 1.0017486180839805 1.0906656381241115 1.0094507896371256 1.105814791910878 1.0343963599312818 1.0222478800037853 1.0 22.065711458719665 LSS(ph)SLGR ddPTM_KYSE-520_SHP099_60min_R1 1 LSSSLGR 7 0 Q9BST9;Q9BST9-3;Q9BST9-2 Q9BST9 RTKN Rhotekin 1 LS(0.058)S(0.471)S(0.471)LGR 125.31 0.0032324 4595400000.0 3479400.0 3150600.0 3053700.0 2882200.0 2977200.0 2872800.0 2889900.0 2934600.0 3586100.0 2908300.0 True False 3286390.745988063 2999240.446852988 3250546.388092756 3156123.421434975 3211488.702049195 2854869.78958895 3182039.294706051 2924420.5575407897 2934954.638224366 2882534.724623165 1.1401044774639078 1.0404871869306205 1.1276694640747826 1.0949125415471193 1.1141196928578316 0.9904025666029638 1.103903195865937 1.0145309031526413 1.018185353728238 1.0 21.4589065568161 -6.861539637919754 0.5868759825118743 0.9996939454141248 1.1055946737375786 0.45769990711218766 0.0400076674437159 0.7669441503793227 0.5406980787458516 0.03587128703267422 0.0255058733021461 1.37549926316416e-07 6.861539637919754 0.10590072832345376 LSS(ph)TDDGYIDLQFK ddPTM_KYSE-520_SHP099_60min_R1 6 LSSTDDGYIDLQFK 14 0 Q5JWB9;A0A087WTT2;Q96A57;Q96A57-2 Q5JWB9 TMEM230 Transmembrane protein 230 1 LS(0.133)S(0.837)T(0.029)DDGYIDLQFK;LS(0.184)S(0.799)T(0.017)DDGYIDLQFK;LS(0.015)S(0.985)T(0.001)DDGYIDLQFK;LS(0.097)S(0.891)T(0.012)DDGYIDLQFK;LSS(1)TDDGYIDLQFK;LSS(1)TDDGYIDLQFK 393.1 1.1391999999999999e-81 4711082000.0 10274710.0 10000330.0 8584610.0 10709190.0 9921470.0 13185190.0 13368720.0 17007800.0 19558100.0 12635560.0 True False 9704751.354173403 9519899.135998638 9137987.696461635 11726988.197764615 10702233.24355772 13102896.338412093 14720160.683733951 16948803.911450345 16006842.059578897 12523618.768716926 0.7749159035737462 0.7601556157057928 0.7296603214469969 0.9363897459940065 0.8545639596033622 1.0462548070484354 1.1753919498494976 1.3533471614280694 1.2781323318115372 1.0 23.578148161412006 -6.3738106886455475 1.2990502038183616 1.2440645513683883 0.781223915532158 0.7796972884847951 0.09853872640380978 0.1858159537165735 0.636925435028599 0.04951385558679731 0.04053751168459059 4.228528980026081e-07 6.3738106886455475 -0.46284063583623036 LSS(ph)TDSLESLLSK ddPTM_KYSE-520_SHP099_60min_R1 9 LSSTDSLESLLSK 13 0 Q9Y450-2 Q9Y450-2 HBS1L HBS1-like protein 1 LS(0.004)S(0.993)T(0.003)DSLESLLSK;LS(0.009)S(0.749)T(0.184)DS(0.048)LES(0.01)LLSK;LS(0.002)S(0.989)T(0.009)DSLESLLSK;LS(0.004)S(0.994)T(0.002)DSLESLLSK;LS(0.023)S(0.976)T(0.001)DSLESLLSK;LS(0.122)S(0.861)T(0.016)DSLESLLSK;LS(0.224)S(0.729)T(0.045)DS(0.001)LES(0.002)LLSK;LS(0.156)S(0.838)T(0.006)DSLESLLSK;LS(0.004)S(0.987)T(0.009)DSLESLLSK 230.96 2.3025e-12 418450000.0 855451.0 778876.0 708860.0 759702.0 872454.0 1763935.0 1915235.0 2953590.0 3420006.0 2835640.0 True False 807997.4277307087 741457.6278432889 754554.2498161012 831903.8496672641 941111.166215782 1752925.6273665344 2108845.644692323 2943344.685663091 2799019.1217353577 2810518.435694534 0.2874905275371506 0.26381525145913526 0.26847511129370555 0.2959965816632989 0.3348532264593437 0.6237018783096338 0.7503404417879886 1.0472604087137871 0.9959084723255571 1.0 21.42240484767691 -6.666074501631036 1.2109397060772604 1.032537314655325 0.26723543964327556 0.9842025650339941 0.04017127599875029 0.04890937110977227 0.14541863003018687 0.024061300953023577 0.015026755151788888 2.1573742877331677e-07 6.666074501631036 -0.7653018750120494 down LSSAGPRS(ph)PYCK ddPTM_KYSE-520_SHP099_60min_R1 3 LSSAGPRSPYCK 12 1 Q6PL18;Q6PL18-2 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 LSSAGPRS(1)PYCK;LSS(0.007)AGPRS(0.993)PYCK;LSS(0.005)AGPRS(0.995)PYCK 183.28 1.8355999999999998e-07 5523420000.0 3330080.0 2946670.0 2963870.0 2336640.0 2569190.0 2588730.0 2445430.0 2203220.0 3472500.0 2343780.0 True False 3145353.824050103 2805107.55015816 3154925.802559672 2558713.563063564 2771370.6363085364 2572572.7758293618 2692637.9294968736 2195577.544055416 2841981.534601404 2323015.932633249 1.3539958034143549 1.2075283301989397 1.3581162996946876 1.1014619086848623 1.19300543632822 1.1074279516082475 1.159112983975379 0.945140975234993 1.2234016541504658 1.0 21.14756761837066 -1.0000000171078984 0.18536271519597478 0.9972176580823047 2.544651627092477 0.5250702463006472 0.08770552435633273 41.23825895468635 0.4735402615046225 0.17563708816977147 18.132028864997736 0.09999999606076089 1.0000000171078984 1.5474339690101724 LSSERPS(ph)SDGEGVVENGITTCNGK ddPTM_KYSE-520_SHP099_60min_R1 4 LSSERPSSDGEGVVENGITTCNGK 24 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 LSSERPS(0.5)S(0.5)DGEGVVENGITTCNGK;LS(0.026)S(0.026)ERPS(0.474)S(0.474)DGEGVVENGITTCNGK;LSS(0.001)ERPS(0.499)S(0.499)DGEGVVENGITTCNGK;LSSERPS(0.663)S(0.337)DGEGVVENGITTCNGK 282.21 2.0483999999999997e-48 7703960000.0 2049770.0 1875860.0 1960580.0 2051770.0 1868290.0 2078720.0 2176750.0 2269220.0 2389060.0 2074300.0 True False 1936065.1719848078 1785740.8698767342 2086962.1238389118 2246769.603912857 2015313.7938840147 2065745.9374179696 2396797.13303277 2261348.605459928 1955266.9273016087 2055923.3157809784 0.9417010630327716 0.8685834029750226 1.0150972596203778 1.0928275323631815 0.9802475502927319 1.0047777179049404 1.1658008421983894 1.099918750909693 0.9510407865377345 1.0 20.971355023541904 -4.880776874214142 5.165581106756215 1.0476656419099548 0.90646157425349 0.4209878612119531 0.06291261380938185 0.1830626900099244 7.437672523058193 0.017070949392692377 0.03714482076569423 1.3159007237461372e-05 4.880776874214142 -0.14120406765646476 LSSERPSS(ph)DGEGVVENGITTCNGK ddPTM_KYSE-520_SHP099_60min_R1 4 LSSERPSSDGEGVVENGITTCNGK 24 1 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 LSSERPS(0.007)S(0.993)DGEGVVENGITTCNGK;LSSERPS(0.015)S(0.985)DGEGVVENGITTCNGK;LSSERPS(0.282)S(0.718)DGEGVVENGITTCNGK;LSSERPS(0.106)S(0.894)DGEGVVENGITTCNGK 250.38 4.9674999999999996e-29 7230150000.0 5036690.0 4317110.0 4088130.0 4199830.0 4198600.0 4400690.0 4240150.0 4844570.0 5148970.0 4394820.0 True False 4757294.765307405 4109709.5554857813 4351657.40103927 4598980.580475063 4529005.933233829 4373223.661356932 4668785.741876145 4827765.31740114 4214046.842970942 4355885.313918223 1.0921533563123371 0.9434843342532817 0.9990293792021008 1.0558084635011133 1.03974407194846 1.0039804416758422 1.071833945434266 1.1083315949515782 0.9674375102360779 1.0 22.054534539168806 -5.25108162182686 23.948893928107815 1.0402207555931116 1.0047485510747878 0.03317883689650125 0.05053292819286868 1017.5164753949373 2352663.713773263 0.013362902639672283 0.022797172795645512 5.609425419096104e-06 5.25108162182686 -0.03547220451832378 LSSGLVS(ph)PAPSFYSK ddPTM_KYSE-520_SHP099_60min_R1 1 LSSGLVSPAPSFYSK 15 0 Q15911;Q15911-2 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 LSSGLVS(1)PAPSFYSK 134.9 1.512e-05 644660000.0 1003200.0 1086500.0 971380.0 617540.0 795360.0 984450.0 816160.0 1131500.0 1197700.0 1285200.0 True False 947550.4961703799 1034302.9091302524 1033996.7090629514 676230.8159298294 857950.3070206394 978305.682386815 898665.417754003 1127575.0905940868 980227.8715600003 1273814.127870471 0.7438687289129615 0.8119731807806001 0.8117328002881864 0.5308708712944912 0.6735286477430881 0.7680128999843334 0.7054917967163453 0.8851959370863135 0.7695219028530634 1.0 20.2807233474184 -8.13927698206689 0.7589041083156007 0.9961550602524799 0.7183889415767629 0.4730735803385916 0.08619893336324946 0.7852624800952975 0.9909083937252251 0.09014381550656066 0.03347823633045169 7.2564301301199675e-09 8.13927698206689 -0.277766118675717 LSSGNEENKKEEDNDEIK ddPTM_KYSE-520_SHP099_60min_R1 2 LSSGNEENKKEEDNDEIK 18 2 Q9UHD1;E9PPQ5;Q9UHD1-2 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 0 ; 151.57 1.8587e-06 1305650000.0 1160950.0 1087980.0 710480.0 646590.0 1213260.0 1067160.0 777160.0 1064390.0 933510.0 879200.0 False True 1096549.7892035525 1035711.8077087267 756278.6776081938 708041.7191956274 1308736.6594948974 1060499.4585970982 855722.9171506815 1060697.8795204933 764008.1158720698 871410.9720072502 1.2583612376118087 1.1885457504890236 0.8678783053031166 0.8125233006473281 1.501859285154845 1.2169911702560876 0.9819969505084013 1.2172188709963458 0.8767483316307305 1.0 19.73299375289622 -7.76751705314595 24.999351386285575 0.9383741280135297 1.1235306477973475 0.13616393801404958 0.19307050217738264 352.9084062804233 1451550.4082299108 0.178591338502786 0.05080156118156737 1.707980652628705e-08 7.76751705314595 0.18515651978381775 LSSKLS(ph)AVSLR ddPTM_KYSE-520_SHP099_60min_R1 2 LSSKLSAVSLR 11 1 Q15036-2;Q15036 Q15036-2 SNX17 Sorting nexin-17 1 LSSKLS(0.997)AVS(0.003)LR;LSS(0.027)KLS(0.815)AVS(0.157)LR 162.96 2.9893000000000003e-05 1633230000.0 4986000.0 2458900.0 1433630.0 1345690.0 1417360.0 2125300.0 1670430.0 1796460.0 1892710.0 1513570.0 True False 4709416.640655414 2340770.7531158547 1526044.0836891034 1473583.973003548 1528898.1683247504 2112035.214359996 1839293.3662257646 1790228.4995569151 1549041.5753363373 1500160.9473396423 3.1392742552104203 1.5603464130078404 1.0172535729551964 0.9822839180134469 1.0191560919087184 1.407872414026935 1.226064022988689 1.1933576212150259 1.0325835891698014 1.0 20.51668586036028 -4.2731717753560705 2.672699310777204 1.1253363819056619 3.5101246441625755 0.9562002923611673 0.13014404952013758 0.08810070205679806 0.852810485887312 0.036779585769099565 0.46211030149004345 5.3312398864928615e-05 4.2731717753560705 2.3847882622569134 up LSSLGEEMREDGLS(ph)PNESK ddPTM_KYSE-520_SHP099_60min_R1 1 LSSLGEEMREDGLSPNESK 19 1 Q96BU1-2;Q96BU1 Q96BU1-2 S100PBP S100P-binding protein 1 LSSLGEEMREDGLS(0.969)PNES(0.031)K 52.79 0.057427 0.0 157140.0 131740.0 144310.0 126810.0 118170.0 152700.0 134780.0 148390.0 184970.0 117180.0 True False 148423.13094917638 125411.01265422859 153612.453504164 138861.98427318313 127469.30670467325 151746.94265881108 148404.8777260395 147875.26972448648 151384.110714247 116141.8763646605 1.2779467285611927 1.0798087354854247 1.3226276198763482 1.1956237372744556 1.097530974137589 1.3065652752359393 1.2777895654111884 1.2732295564107297 1.303441234571874 1.0 16.825528721667574 -6.296761127157572 24.9775851829928 1.252130981927825 1.1954817527275556 0.012969180130566249 0.10780100152321496 1860.9236929508827 1315937.2942081403 0.035915913752147074 0.03167661585407554 5.049389502679549e-07 6.296761127157572 -0.05664922920026938 LSSLRASTS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 LSSLRASTSK 10 1 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 1 LSSLRAS(0.227)T(0.227)S(0.546)K 90.975 0.005509 390960000.0 1463400.0 1010800.0 888180.0 599990.0 679420.0 786810.0 584780.0 659810.0 1268300.0 615280.0 True False 1382222.2847844255 962239.6507582677 945433.5039382465 657012.869206429 732886.4886290024 781899.2269376499 643895.2693028157 657521.2731108111 1038008.6912411711 609829.0978805969 2.266573191715856 1.5778841221293642 1.5503253406962882 1.0773721219433687 1.2017899624273092 1.2821612311630692 1.0558618333244716 1.0782058045376384 1.7021304736829905 1.0 19.21804546434909 -3.9028572619910924 0.9778742988058012 1.2009368788345054 3.5648270183897597 0.7178605317125437 0.20096151983025862 1.864758340569896 0.8909079522257723 0.06389623691856035 5.468270851709343 0.00012506700159015406 3.9028572619910924 2.363890139555254 LSSPAAFLPACNS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 4 LSSPAAFLPACNSPSK 16 0 Q86YS7;Q86YS7-3;H0YFE9;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 LSSPAAFLPACNS(0.998)PS(0.002)K;LSSPAAFLPACNS(0.969)PS(0.031)K;LSSPAAFLPACNS(0.981)PS(0.019)K;LSSPAAFLPACNS(1)PSK 400.27 9.988099999999997e-87 17181530000.0 5730770.0 6297900.0 4254530.0 3809450.0 3757300.0 5758270.0 4482310.0 5541880.0 6041810.0 5815710.0 True False 5412872.7640932305 5995339.430659368 4528783.811288686 4171498.9826470916 4052978.1338873594 5722330.501008199 4935425.637929987 5522656.51176451 4944769.605635743 5764187.333953915 0.9390521942631413 1.0401014199076863 0.7856760283642948 0.723692472323878 0.703130883691672 0.9927384676241942 0.8562222828633428 0.9580980269730879 0.8578433210365325 1.0 22.458685792653366 -9.156575009687089 9.81815739163161 0.9999999997610445 0.8714507315556032 0.11362381735398719 0.10638135292425344 0.0 0.0 0.11129932939663997 0.02699405242133879 6.973085500063278e-10 9.156575009687089 -0.12854926820544132 LSSS(ph)KENLDASK ddPTM_KYSE-520_SHP099_60min_R1 3 LSSSKENLDASK 12 1 Q8NFA0;K7EQL6;K7EN13 Q8NFA0 USP32 Ubiquitin carboxyl-terminal hydrolase 32;Ubiquitin carboxyl-terminal hydrolase 1 LS(0.028)S(0.173)S(0.798)KENLDASK;LS(0.005)S(0.197)S(0.798)KENLDASK;LS(0.039)S(0.218)S(0.742)KENLDASK 179.55 1.093e-06 6205300000.0 5617900.0 4747800.0 4385100.0 4173700.0 4282800.0 4080700.0 4443900.0 4537800.0 5291700.0 4021700.0 True False 5306263.887994001 4519708.561406915 4667770.5624080775 4570367.1931313425 4619831.994201367 4055230.8376411963 4893132.780284513 4522059.430930482 4330860.672901449 3986070.866835258 1.3312015930632237 1.1338756164652284 1.171020465603025 1.1465845304351017 1.1589939437954055 1.0173504117504182 1.2275578994332874 1.1344653875962754 1.086498664370194 1.0 21.92653592885462 -1.0000000000000002 0.11189023910075192 0.9782439955954308 1.7635181925908674 0.4701571652247789 0.06637844620528373 109.5487773295928 0.8550672998175229 0.5839783617087968 13.30417276229899 0.09999999999999995 1.0000000000000002 0.7852741969954365 LSSS(ph)LDNKEK ddPTM_KYSE-520_SHP099_60min_R1 1 LSSSLDNKEK 10 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YHI8;H0YIS4;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 LS(0.032)S(0.161)S(0.807)LDNKEK 86.46700000000001 0.0027611000000000003 326420000.0 591060.0 539780.0 467630.0 428390.0 508700.0 554600.0 481970.0 452710.0 681560.0 496450.0 True False 558272.7235511012 513848.1585737016 497774.17803445447 469104.05679985014 548731.7958929279 551138.535681575 530692.2311739082 451139.6546733079 557805.884729427 492051.83923225536 1.1345811132871075 1.0442967947756376 1.0116295445844234 0.9533630796539436 1.1151910269233214 1.1200822591000008 1.078529107831287 0.9168539139640604 1.1336323538588275 1.0 18.908450790537042 -13.999999967897143 0.24590013142748138 0.6961431936424455 1.0566680644142032 0.04558173292067802 0.07257602385302277 715.9404158205815 7.12547572720768 109.21678214711869 0.1116985590779841 1.0000000739195633e-14 13.999999967897143 0.36052487077175777 LSSS(ph)LGR ddPTM_KYSE-520_SHP099_60min_R1 10 LSSSLGR 7 0 Q9BST9;Q9BST9-3;Q9BST9-2 Q9BST9 RTKN Rhotekin 1 LSS(0.027)S(0.973)LGR;LSS(0.011)S(0.989)LGR;LSS(0.017)S(0.983)LGR;LSS(0.002)S(0.998)LGR;LSS(0.002)S(0.998)LGR;LSS(0.003)S(0.997)LGR;LSS(0.001)S(0.999)LGR;LS(0.002)S(0.131)S(0.867)LGR;LS(0.071)S(0.304)S(0.625)LGR;LSS(0.013)S(0.987)LGR 171.46 0.00057782 76235020000.0 60326500.0 53045800.0 54216500.0 51533200.0 52036000.0 51563400.0 50429900.0 52390100.0 61077900.0 52064400.0 True False 56980068.787103675 50497400.144630924 57711382.33946712 56430899.83397849 56130937.155660406 51241573.694127895 55527846.44039473 52208370.97104124 49987693.0085619 51603149.9214903 1.1041974932498093 0.978572048827607 1.1183693713905056 1.0935553337312391 1.0877424583781947 0.9929931365059592 1.0760553672571445 1.0117283741490923 0.9686946065233194 1.0 25.6209557964766 -7.433472439215839 3.645889853809379 0.9848601952460381 1.06248891960345 0.3652696592159286 0.04369194988330502 0.2692139018611568 6.583824112234293 0.02818090722478598 0.011682845067619952 3.685764313579298e-08 7.433472439215839 0.07762872435741186 LSSS(ph)PGLFGAFSVR ddPTM_KYSE-520_SHP099_60min_R1 2 LSSSPGLFGAFSVR 14 0 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 LSS(0.001)S(0.999)PGLFGAFSVR;LSS(0.024)S(0.976)PGLFGAFSVR 312.67 1.8106999999999995e-42 1187670000.0 1122730.0 1147010.0 1001780.0 827230.0 847320.0 1003280.0 760610.0 926800.0 1133680.0 998660.0 True False 1060449.9287932315 1091905.9179028894 1066356.3417046713 905849.6904842308 913999.2634086807 997018.1573721792 837499.8816382468 923585.147116746 927832.2897471333 989812.6493457224 1.0713642925196007 1.1031440329891236 1.077331495419406 0.9151728774965726 0.9234063274629242 1.0072796685627525 0.8461195986855128 0.9330908710120511 0.9373817260877007 1.0 19.916795953731782 -5.254047580302297 20.6621119019669 0.9332187293071746 1.0858665571681698 0.7076366561641774 0.043072006098681385 26.922125641562435 75251.24366155826 0.011490649935192077 0.01926906348054196 5.571247082895048e-06 5.254047580302297 0.15264782786099518 LSSS(ph)SATLLNSPDR ddPTM_KYSE-520_SHP099_60min_R1 1 LSSSSATLLNSPDR 14 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LS(0.004)S(0.06)S(0.906)S(0.014)AT(0.014)LLNSPDR 89.13600000000001 0.006372999999999999 106360000.0 449480.0 451450.0 433450.0 375710.0 403940.0 401040.0 359010.0 415780.0 490110.0 420080.0 True False 424546.4483838343 429761.6643597349 461390.88054452155 411417.36543866934 435727.77989579266 398536.96060176555 395302.23439995176 414337.7562237816 401118.3786676733 416358.41801729443 1.0196658215907615 1.0321916064679728 1.1081579249476268 0.9881326944170975 1.046520884507957 0.9571968365611654 0.949427746128894 0.9951468213297205 0.9633968266519158 1.0 18.667466467387865 -6.257791612750772 24.90278905660298 0.9712549526106192 1.0395827257884336 0.5205830146224728 0.03159433671898271 242.40388078689384 1654861.1812542176 0.01059457157856768 0.010204453485175612 5.523424058169294e-07 6.257791612750772 0.06832777317781435 LSSSPPRAS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 LSSSPPRASPVR 12 1 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 LSS(0.009)S(0.034)PPRAS(0.957)PVR 71.513 0.051894 0.0 175700.0 181260.0 164820.0 104550.0 141920.0 149210.0 128230.0 125490.0 170740.0 170480.0 True False 165953.57075073328 172551.9975231932 175444.56092132424 114486.40056589618 153088.29658565822 148278.7250433607 141192.73980419993 125054.70447958606 139737.92000513876 168969.6798314331 0.9821499982499301 1.0212009497522505 1.0383197807816797 0.6775558826891882 0.9060104554756899 0.8775463455413182 0.8356099150158542 0.7401014466284286 0.8269999691337734 1.0 17.36640486484233 -5.230668803651595 24.998137335151643 0.8312808262907035 1.014621358962401 0.4817304582495848 0.08356589782425501 550.5712999368056 447285.66216677753 0.021857306474282162 0.037852407979341356 5.879375473542722e-06 5.230668803651595 0.18334053267169736 LSSSSATLLNS(ph)PDR ddPTM_KYSE-520_SHP099_60min_R1 6 LSSSSATLLNSPDR 14 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR;LSSSSATLLNS(1)PDR 272.12 5.416999999999999e-25 8835200000.0 4318380.0 4841510.0 3608120.0 3185780.0 3226510.0 3639190.0 2898220.0 3115870.0 3957960.0 3642600.0 True False 4078830.8529228983 4608916.592345329 3840705.188396119 3488555.5733603192 3480417.9806693336 3616476.4653210123 3191200.3615014316 3105061.7742195223 3239294.236052119 3610329.397899913 1.1297669556953742 1.2765917134946974 1.063810186026298 0.9662707162924169 0.9640167411577051 1.0017026334008954 0.8839083667428562 0.8600494392632707 0.8972295541610079 1.0 21.783699040518897 -5.0816627224914015 2.3677083318220538 0.9316112843545515 1.2038900906156673 0.7697218637274331 0.057441993316250155 0.13473526980607795 1.476242172159806 0.017146918883372508 0.038171900563171796 8.285854017517343e-06 5.0816627224914015 0.2722788062611158 LSSWDQAET(ph)PGHT(ph)PSLR ddPTM_KYSE-520_SHP099_60min_R1 5 LSSWDQAETPGHTPSLR 17 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 LS(0.002)S(0.003)WDQAET(0.995)PGHT(0.975)PS(0.025)LR;LSSWDQAET(1)PGHT(0.901)PS(0.099)LR;LSSWDQAET(1)PGHT(0.993)PS(0.007)LR;LSSWDQAET(1)PGHT(0.807)PS(0.193)LR;LSSWDQAET(1)PGHT(1)PSLR 217.84 9.0356e-18 1785370000.0 1283160.0 1332390.0 1209760.0 1385480.0 1234300.0 1277480.0 1258650.0 1334460.0 1489830.0 1441670.0 True False 1211980.5568839565 1268379.9844418375 1287743.0652844394 1517155.6026402477 1331432.3877936741 1269506.7734628534 1385886.62524024 1329831.069725306 1219314.4275580172 1428897.9254022862 0.8481925372960006 0.8876631156733906 0.9012141751986191 1.0617662575254379 0.9317897129837515 0.8884516877617004 0.9698989694103328 0.9306690464617412 0.8533250737380252 1.0 20.446471429231863 -5.009263112011008 24.137892556065626 0.9458266156462336 0.8745554772195312 0.26055183803773985 0.05486187499569357 413.9767597941651 1078759.9923222838 0.014904041830668326 0.028542916133935496 9.788967530757943e-06 5.009263112011008 -0.07127113842670241 LSSWDQAET(ph)PGHTPSLR ddPTM_KYSE-520_SHP099_60min_R1 3 LSSWDQAETPGHTPSLR 17 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LSSWDQAET(0.983)PGHT(0.014)PS(0.003)LR;LSSWDQAET(1)PGHTPSLR;LSSWDQAET(1)PGHTPSLR 178.22 1.383e-08 891680000.0 761580.0 874320.0 652920.0 782130.0 628210.0 850610.0 684200.0 754730.0 862290.0 844320.0 True False 719333.6392279085 832316.3548189251 695008.2679089368 856463.4000440411 677646.5529740447 845301.0274722407 753365.6131485109 752112.0177853069 705719.8725619711 836839.9816710206 0.8595832596233357 0.9945943944467583 0.8305151320819172 1.023449427373004 0.8097683760530956 1.0101107093190325 0.9002505014688397 0.8987524906296577 0.8433151952811504 1.0 19.674592255252744 LSSWDQAETPGHT(ph)PSLR ddPTM_KYSE-520_SHP099_60min_R1 1 LSSWDQAETPGHTPSLR 17 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LSSWDQAET(0.143)PGHT(0.855)PS(0.002)LR 114.63 0.00018395 476040000.0 337520.0 350520.0 318270.0 351930.0 300620.0 352520.0 331210.0 318210.0 337080.0 412920.0 True False 318797.0927705612 333680.49305875396 338786.1934500054 385377.3213883873 324277.0837061764 350319.79191934527 364691.9390980973 317106.20378077263 275874.7690953038 409261.8500468989 0.778956291024998 0.8153227402469012 0.8277981282916611 0.9416399826766786 0.7923462293615108 0.8559795932095816 0.8910968345969845 0.7748247332225914 0.6740788789956607 1.0 18.642664664517763 -9.600274654464348 14.102914951145923 1.0000008285392619 0.8222099502005025 0.38807911459184996 0.06868688345153166 0.0 0.0 0.06867698060218327 0.01665661441595864 2.5102983783678536e-10 9.600274654464348 -0.1777908783387594 LST(ph)GTTVEDVQK ddPTM_KYSE-520_SHP099_60min_R1 1 LSTGTTVEDVQK 12 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 LS(0.257)T(0.743)GTTVEDVQK 349.17 1.8124e-50 1541600000.0 913560.0 1031000.0 800290.0 889990.0 1115200.0 1594300.0 1662200.0 2181800.0 2446500.0 2191200.0 True False 862883.0056632902 981469.2124374503 851877.973909273 974574.3820147483 1202959.895379976 1584349.3823244413 1830231.3975087015 2174231.845035949 2002277.2712461757 2171787.6727278014 0.39731462541156004 0.45191766431048425 0.3922473566853339 0.4487429384801078 0.5539030866074667 0.7295139401608594 0.8427303555001306 1.0011254195512942 0.921948907063867 1.0 21.050451632652365 -6.453313051639321 1.0829259917840035 0.984141050292225 0.40879205119955325 0.9840879611609392 0.030293778673773267 0.05334675374182201 0.1290546938530183 0.01735287856340239 0.013087462214650986 3.5211696376158956e-07 6.453313051639321 -0.5753489990926717 down LST(ph)PQKK ddPTM_KYSE-520_SHP099_60min_R1 5 LSTPQKK 7 1 B5MC51;P53671-3;F5GXC4;F5H2U0;Q96C90 B5MC51;Q96C90 LIMK2;PPP1R14B LIM domain kinase 2;Protein phosphatase 1 regulatory subunit 14B 1 LS(0.261)T(0.739)PQKK;LS(0.069)T(0.931)PQKK;LS(0.079)T(0.921)PQKK;LS(0.009)T(0.991)PQKK;LS(0.383)T(0.617)PQKK 114.19 0.0033119 40633110000.0 41750720.0 33555890.0 27133880.0 25870080.0 28331170.0 39610600.0 32467250.0 28093310.0 38834310.0 42339090.0 True False 39434724.333603084 31943814.675982248 28882973.320543 28328764.62507685 30560671.896693278 39363375.55259401 35749356.47982457 27995860.864637855 31782978.23728917 41963998.60191362 0.9397275199557555 0.7612195153043771 0.6882798180063301 0.6750730523517131 0.7282592916514792 0.938027282052168 0.8519053872572179 0.6671399722942799 0.7573867909680041 1.0 25.322648818015658 LSTEADTDT(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 4 LSTEADTDTPKK 12 1 Q9BYW2;H7C3H4;A0A1W2PPX9 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 LSTEADT(0.011)DT(0.988)PKK;LSTEADT(0.009)DT(0.991)PKK;LSTEADT(0.004)DT(0.996)PKK;LSTEADT(0.001)DT(0.999)PKK 143.97 5.2292e-05 2859880000.0 3669240.0 3783970.0 2785330.0 2472930.0 2757360.0 3556800.0 2612340.0 2933130.0 3835300.0 3451020.0 True False 3465699.9427514058 3602182.4013452334 2964876.828485573 2707956.5236864844 2974348.544767691 3534600.6918720314 2876420.8211814985 2922955.6566276914 3138906.200045145 3420446.6476529352 1.0132302297799392 1.053132170272851 0.8668098450008077 0.7916967585343417 0.8695789910386846 1.0333740168984735 0.8409488927872212 0.8545537930355921 0.9176889814080336 1.0 21.705753296271666 -4.7607054050574105 24.999973007280964 0.8897895031860004 1.033181239467974 0.3768900474921495 0.06965846638068188 18.415968763961075 627152.3088247655 0.018372763369520484 0.04311769606083518 1.734980487866026e-05 4.7607054050574105 0.14339173628197366 LSTFRES(ph)FK ddPTM_KYSE-520_SHP099_60min_R1 1 LSTFRESFK 9 1 P23497;P23497-3;P23497-4;P23497-2;E9PHV6;P23497-7;P23497-6;P23497-5;H7C4B4;H7C1G8 P23497 SP100 Nuclear autoantigen Sp-100 1 LSTFRES(1)FK 90.61399999999999 0.0038481 0.0 72503.0 92008.0 71847.0 66801.0 109930.0 74343.0 79577.0 83182.0 103310.0 77793.0 True False 68481.11405885278 87587.79757317646 76478.37257926447 73149.74695554709 118580.86558386013 73878.9977608643 87621.41975667786 82893.46105682473 84551.50823316663 77103.81454203825 0.8881676537743248 1.1359723003772033 0.9918883136134233 0.9487176139082543 1.5379377309433624 0.95817565187497 1.136408364191959 1.0750889764556315 1.096593063979575 1.0 16.23451461562685 -3.423307423224983 1.1258823909530633 1.1108350452709514 1.0616556839695403e-14 0.11836844756197551 0.16243180124262566 21.01744053504252 5.458171031966274 0.04859179319868632 43.44644899140566 0.0003773050141768751 3.423307423224983 -1.1108350452709408 LSTGS(ph)FPEDLLESDSSR ddPTM_KYSE-520_SHP099_60min_R1 3 LSTGSFPEDLLESDSSR 17 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 LS(0.138)T(0.096)GS(0.766)FPEDLLESDSSR;LS(0.009)T(0.015)GS(0.977)FPEDLLESDSSR;LS(0.074)T(0.015)GS(0.911)FPEDLLESDSSR 213.51 5.6338e-18 169221000.0 241344.0 210108.0 203060.0 180344.0 171058.0 188309.0 164112.0 180333.0 242781.0 184930.0 True False 227956.16721266348 200014.09630146256 216149.57250748746 197483.8395375994 184519.29141311662 187133.69368132314 180702.04253877286 179707.4669130386 198698.09041096177 183291.66407336277 1.2436799478312537 1.0912340029899374 1.1792656998354998 1.077429464869478 1.0066976714187204 1.020961289360233 0.9858715804252101 0.9804453891646181 1.0840541571570463 1.0 17.48378164943907 -5.482318153148256 2.483563997629025 1.0105035188961875 1.1652557055430077 0.7201275781757472 0.043984210547077816 0.15222722261250396 1.8641320513742097 0.013048221387609353 0.02005387537515903 3.293683368661254e-06 5.482318153148256 0.15475218664682022 LSTIQNS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 3 LSTIQNSPTK 10 0 Q5VYV7 Q5VYV7 SLX4IP Protein SLX4IP 1 LSTIQNS(0.971)PT(0.028)K;LSTIQNS(1)PTK;LSTIQNS(1)PTK 158.11 8.6759e-05 3691400000.0 4812030.0 5684110.0 4081150.0 3535110.0 4264480.0 5138680.0 4101450.0 5279410.0 5991260.0 5871600.0 True False 4545097.1033560205 5411036.823576953 4344227.459070876 3871085.791530425 4600070.3144279085 5106607.59202344 4516064.592294596 5261096.958933563 4903398.211373945 5819582.192035674 0.7810005861891879 0.9297981616244151 0.7464844237471414 0.6651827680736527 0.7904468332319947 0.8774869781909829 0.7760118240919438 0.9040334486784257 0.8425687703293265 1.0 22.472484150101184 -8.146500763828127 0.624977338549657 1.000190151207175 0.7892855989301034 0.43191887969805587 0.0706064689740333 1.0153208409304124 0.8873781705650609 0.07951388217537012 0.032203088832619145 7.136729499281877e-09 8.146500763828127 -0.2109045522770715 LSTIQNS(ph)PTKK ddPTM_KYSE-520_SHP099_60min_R1 1 LSTIQNSPTKK 11 1 Q5VYV7 Q5VYV7 SLX4IP Protein SLX4IP 1 LSTIQNS(0.86)PT(0.14)KK 145.49 7.8946e-05 583450000.0 401010.0 409930.0 357230.0 292800.0 325530.0 373140.0 320140.0 409100.0 502310.0 411130.0 True False 378765.1759063837 390236.3474825257 380257.61738820944 320627.6239664698 351147.3589876648 370811.0948507451 352502.87546530913 407680.9275846576 411103.1662046462 407487.7080542997 0.9295131323468325 0.9576640957977678 0.9331756759090714 0.7868399895972926 0.8617373040878885 0.909993326231408 0.865063825234052 1.0004741726597852 1.0088725575738464 1.0 18.636397015261338 -7.2714226618812745 23.53563114676856 1.0035050618254109 0.8915912482216046 0.5585732130199315 0.045265509260624 269.2716228129736 634801.5511158434 0.027031097596526357 0.013258927851092376 5.352754658544836e-08 7.2714226618812745 -0.11191381360380626 LSTS(ph)WTEEDVNDNTLFK ddPTM_KYSE-520_SHP099_60min_R1 2 LSTSWTEEDVNDNTLFK 17 0 P19883-2;P19883 P19883-2 FST Follistatin 1 LS(0.001)T(0.007)S(0.992)WTEEDVNDNTLFK;LS(0.001)T(0.012)S(0.986)WTEEDVNDNTLFK 265.45 1.4315e-29 89247000.0 235311.0 250511.0 236045.0 215765.0 262018.0 282206.0 234251.0 250059.0 313240.0 298042.0 True False 222257.82974915107 238476.07553532324 251260.83838535336 236271.24072788746 282637.3259215121 280444.6476749992 257931.37714944698 249191.6036932092 256363.5121378096 295401.5797531673 0.7523921501532459 0.8072945166190036 0.8505737802597494 0.7998306607747725 0.9567901639445503 0.9493674607608197 0.8731550364929335 0.8435689609426924 0.8678474649730131 1.0 18.172318015827145 -4.927894223875053 0.9640137135771539 0.9030770432615799 0.7498872953787655 0.49231135448080976 0.052605966301050806 0.8443704508347836 1.1948258502036881 0.020464259654245982 0.10923962911844907 1.1806081478205036e-05 4.927894223875053 -0.15318974788281436 LSTT(ph)PAHS(ph)PVLK ddPTM_KYSE-520_SHP099_60min_R1 2 LSTTPAHSPVLK 12 0 Q8IY63;Q8IY63-2 Q8IY63 AMOTL1 Angiomotin-like protein 1 2 LS(0.304)T(0.304)T(0.392)PAHS(1)PVLK;LS(0.041)T(0.406)T(0.553)PAHS(1)PVLK 136.81 5.2407e-05 703540000.0 970510.0 892860.0 763410.0 1034910.0 899480.0 793340.0 834470.0 788860.0 994650.0 846760.0 True False 916673.8756362792 849965.6653898164 812620.6300991878 1133267.5352429617 970263.9586588781 788388.4707854696 918826.3712423824 786123.628781309 814046.6330860449 839258.3651693116 1.092242762991525 1.0127580500414133 0.968260387771351 1.3503202139836126 1.1560968575667845 0.9393870868673683 1.0948075221830154 0.9366884637756536 0.9699595105278689 1.0 19.678755486256136 -6.258504612268295 24.880535494011568 0.9908764833110205 1.1150207490206372 0.27688082153498783 0.103188231159726 381.0920298521721 3230855.083300809 0.03739726139017439 0.03588624283782712 5.514363460193283e-07 6.258504612268295 0.12414426570961667 LSVAS(ph)TPISQR ddPTM_KYSE-520_SHP099_60min_R1 1 LSVASTPISQR 11 0 H0YMD2;Q9BXS6-7;Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6 H0YMD2 NUSAP1 Nucleolar and spindle-associated protein 1 1 LS(0.001)VAS(0.729)T(0.269)PISQR 74.524 0.01816 374580000.0 785420.0 926720.0 711950.0 626820.0 536030.0 781150.0 644110.0 751160.0 807330.0 770570.0 True False 741851.1869040468 882198.9801649218 757843.4361602765 686392.7843396956 578212.5114065 776274.5530971205 709222.9247078147 748554.4012820614 660739.2231331177 763743.3492943886 0.9713357079828353 1.155098739622378 0.9922750055505388 0.8987217826169537 0.757076983964184 1.0164076110309954 0.9286142070671457 0.9801124971806824 0.8651325392798053 1.0 19.542728386380578 -5.0089246537339065 5.780777908867894 0.9190889138572963 1.0665870420178676 0.33089240243500595 0.08147673608188577 0.16388586751336132 20.70975691736069 0.021683529163606063 0.0420435092230779 9.796599330327797e-06 5.0089246537339065 0.14749812816057128 LSVDYGK ddPTM_KYSE-520_SHP099_60min_R1 2 LSVDYGK 7 0 Q9BQE3;F5H5D3;F8VQQ4;C9JQ00;C9JEV8;C9JJQ8;P68363;P68366-2;P68366;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2;C9JDS9 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1A;TUBA4A;TUBA1B Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain 0 ; 120.65 0.018903 2573500000.0 5803400.0 6434900.0 4705000.0 3734000.0 5506400.0 6601800.0 5000500.0 5526300.0 5413400.0 5847800.0 False True 5481473.833208921 6125757.745018178 5008291.828266172 4088878.237331959 5939722.352869711 6560595.717386639 5505999.340177032 5507130.555148117 4430463.020708781 5795993.041519559 0.945735061091761 1.056895289752136 0.864095555738129 0.7054663813502373 1.0247980476029817 1.1319191845797352 0.9499665201001521 0.9501616919995974 0.7644010248064805 1.0 22.466624432167386 -11.182857138491691 2.4259105877061136 1.1745715803176875 0.937165265165993 0.02547473140843881 0.12215610216753152 62666262.077350505 13110090.098209025 60182580.77870633 0.03228482517377565 6.563611413038299e-12 11.182857138491691 -0.23740631515169452 LSVEEFFMDLHNFR ddPTM_KYSE-520_SHP099_60min_R1 1 LSVEEFFMDLHNFR 14 0 A0A2R8Y5N1;A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610;H9KV28 A0A2R8Y5N1 DIAPH1 Protein diaphanous homolog 1 0 150.22 4.6435000000000005e-06 30314000.0 46293.0 41096.0 32997.0 30606.0 51474.0 43331.0 34885.0 35127.0 29986.0 29918.0 False True 43725.03500719239 39121.686473646405 35124.03941706669 33514.78503797055 55524.71095300294 43060.555156181676 38411.51624479072 35005.15263570344 24541.2982855458 29652.94979585178 1.4745593712673128 1.319318541426163 1.1845040597607013 1.1302344376767202 1.8724852446474118 1.4521508130771368 1.2953691457085392 1.1804947864107735 0.8276174361910847 1.0 14.855888006889678 -7.460720737572826 2.2798320719882414 0.9177967542857527 1.3944794128950522 0.4809886777332101 0.19655976638879097 0.2986089510427938 2.874237784971001 0.16762030057639984 0.058573483714646574 3.461618972033059e-08 7.460720737572826 0.4766826586092995 LSVHDMKPLDS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 3 LSVHDMKPLDSPGR 14 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 LSVHDMKPLDS(1)PGR;LSVHDMKPLDS(1)PGR;LSVHDMKPLDS(1)PGR 133.95 5.5369e-06 480600000.0 709860.0 788480.0 1011920.0 1239390.0 700430.0 811290.0 635360.0 706150.0 827050.0 795610.0 True False 670482.6507291723 750600.2372673913 1077149.9823292464 1357181.2529638105 755549.8560984539 806226.4381772556 699588.3893160454 703700.5304666485 676878.5682338646 788561.5143752142 0.8502604280154389 0.9518600940880305 1.3659682379791054 1.721084821187501 0.9581368635484121 1.0224014531270111 0.8871703431663627 0.8923850804768199 0.8583712949397014 1.0 19.588863776088605 -5.960631585889614 24.999851900287517 0.9300586549514219 1.2290357585748293 0.28093835086644015 0.22427140953700286 224.27614064268002 142419.59351588087 0.07639932699727638 0.08662856504714402 1.0948847684792118e-06 5.960631585889614 0.29897710362340735 LSVPT(ph)S(ph)DEEDEVPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 8 LSVPTSDEEDEVPAPKPR 18 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 2 LSVPT(1)S(1)DEEDEVPAPKPR;LSVPT(1)S(1)DEEDEVPAPKPR;LS(0.003)VPT(0.997)S(1)DEEDEVPAPKPR;LS(0.007)VPT(0.994)S(0.999)DEEDEVPAPKPR;LSVPT(1)S(1)DEEDEVPAPKPR;LSVPT(1)S(1)DEEDEVPAPKPR;LS(0.001)VPT(0.999)S(1)DEEDEVPAPKPR;LS(0.001)VPT(1)S(0.999)DEEDEVPAPKPR 166.69 1.8354e-08 14349500000.0 17774750.0 17458520.0 15887800.0 15544590.0 15214820.0 14664570.0 15537430.0 16698460.0 17735210.0 16343960.0 True False 16788749.184414353 16619786.49342722 16911953.00937882 17021943.159948595 16412139.7735161 14573042.97908395 17108105.055103853 16640536.939709872 14514942.932261556 16199165.229808457 1.0363959467195871 1.0259656135147488 1.0440015130075189 1.050791378349924 1.0131472542372582 0.8996169106459732 1.0561102879315556 1.0272465712670944 0.8960303031882332 1.0 23.94941613473839 -6.005454857862091 24.36736731482131 0.9796185147442721 1.0378355832682133 0.28668528191415377 0.04719206913800762 252.98528894891368 1130119.9204754138 0.014896718201098776 0.016404594291058772 9.875182766307226e-07 6.005454857862091 0.05821706852394126 LSVPT(ph)SDEEDEVPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 3 LSVPTSDEEDEVPAPKPR 18 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 LSVPT(0.633)S(0.367)DEEDEVPAPKPR;LSVPT(0.5)S(0.5)DEEDEVPAPKPR;LS(0.004)VPT(0.554)S(0.442)DEEDEVPAPKPR 206.63 9.6904e-14 3848100000.0 6181500.0 6215800.0 5474000.0 5038420.0 5029180.0 5545400.0 5526100.0 5732380.0 6554300.0 5909900.0 True False 5838599.872485248 5917183.637893991 5826862.798709667 5517269.921943792 5424947.853880076 5510789.101638312 6084732.117538709 5712495.711727553 5364204.340457307 5857542.88383263 0.9967660482009162 1.0101818723727956 0.9947622944071579 0.9419085837462627 0.9261473558910585 0.9408021777951655 1.038785756794567 0.9752375398726623 0.915777220387582 1.0 22.48186418060912 -5.103586303591455 5.906335472685638 0.9624779524853518 1.0032509852106877 0.20484415086067387 0.03447252067319644 0.38048373301181354 18.041340267944367 0.009980912513346214 0.017649359405175827 7.877958640272113e-06 5.103586303591455 0.040773032725335834 LSVPTS(ph)DEEDEVPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 11 LSVPTSDEEDEVPAPKPR 18 1 Q5STZ8;Q8NE71;Q8NE71-2;F5GYK6 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 LSVPT(0.206)S(0.794)DEEDEVPAPKPR;LSVPT(0.02)S(0.98)DEEDEVPAPKPR;LSVPT(0.164)S(0.836)DEEDEVPAPKPR;LSVPT(0.198)S(0.802)DEEDEVPAPKPR;LSVPT(0.001)S(0.999)DEEDEVPAPKPR;LSVPT(0.016)S(0.984)DEEDEVPAPKPR;LSVPT(0.042)S(0.958)DEEDEVPAPKPR;LSVPT(0.004)S(0.996)DEEDEVPAPKPR;LSVPT(0.127)S(0.873)DEEDEVPAPKPR;LSVPT(0.111)S(0.889)DEEDEVPAPKPR;LSVPT(0.029)S(0.971)DEEDEVPAPKPR 291.7 4.0004e-38 24899570000.0 18563440.0 17080910.0 15659600.0 14690390.0 15384880.0 15070510.0 16803000.0 16732760.0 18410330.0 17266720.0 True False 17533688.9778998 16260317.444631396 16669042.872245885 16086560.248773193 16595582.52800706 14976449.35696815 18501611.22147682 16674717.961015556 15067478.158651784 17113750.29410488 1.0245380864263034 0.950131745829699 0.9740146131492766 0.9399786705030094 0.9697221382109149 0.8751120648363695 1.0810962473754224 0.9743462230344357 0.880431109471197 1.0 24.02865260976849 -9.7396575426247 16.190480978970026 0.999999999844135 0.9638974823364673 0.03512140912602968 0.05767961801728425 0.0 0.0 0.05430095540039309 0.013169916158104382 1.8211363264015653e-10 9.7396575426247 -0.036102517507667686 LSVPYVPQVTDEDRLS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 7 LSVPYVPQVTDEDRLSR 17 1 A0A1B0GUZ7;Q14156-3;Q14156-2;Q14156 A0A1B0GUZ7 EFR3A Protein EFR3 homolog A 1 LSVPYVPQVTDEDRLS(1)R;LSVPYVPQVTDEDRLS(1)R;LSVPYVPQVTDEDRLS(1)R;LSVPYVPQVTDEDRLS(1)R;LSVPYVPQVTDEDRLS(1)R;LSVPYVPQVTDEDRLS(1)R;LSVPYVPQVTDEDRLS(1)R 221.05 2.206e-18 5292280000.0 1807052.0 2079926.0 1799963.0 2803220.0 2351225.0 2345838.0 2185206.0 2785010.0 3773220.0 1826844.0 True False 1706811.2232911477 1980003.2329274258 1915991.4950226247 3069637.1859811763 2536253.0308597432 2331196.7548975768 2406107.948035376 2775349.4503362174 3088098.3631356987 1810659.583423126 0.9426461157675764 1.0935259454922768 1.058173227349762 1.695314356207091 1.4007343258111793 1.2874848349408419 1.328857157946018 1.5327836749353547 1.7055101861264956 1.0 20.78808390441892 -5.159291388074545 8.13625559119587 1.4330870975603656 1.0336370239995942 0.4526110837450946 0.19639662624064905 0.2702865127203 19.38742198408416 0.05235306803430166 0.09107320588195537 6.929607109032089e-06 5.159291388074545 -0.39945007356077133 LSVQSNPS(ph)PQLR ddPTM_KYSE-520_SHP099_60min_R1 6 LSVQSNPSPQLR 12 0 O75152;E9PBY7;E9PQ61;A0A1W2PPR9 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 LSVQSNPS(1)PQLR;LSVQSNPS(1)PQLR;LSVQSNPS(1)PQLR;LSVQSNPS(1)PQLR;LSVQSNPS(1)PQLR;LSVQS(0.056)NPS(0.944)PQLR 283.66 1.6751e-29 5131480000.0 4631550.0 5039590.0 4101660.0 3297810.0 3479600.0 4334000.0 3614570.0 4441530.0 5189390.0 4853890.0 True False 4374628.688733973 4797480.531821191 4366059.566488036 3611232.8708772673 3753424.7237842255 4306949.898384323 3979966.0104036983 4426123.369090894 4247127.589876223 4810888.310869273 0.909318280960783 0.9972130346452257 0.9075370876151433 0.7506374368987915 0.7801936942298343 0.8952504444249105 0.8272829783663308 0.9200220589388707 0.8828156705032331 1.0 22.19787187566066 -9.725389063782645 12.57463307782476 1.000000175523524 0.8732043763196611 0.23384610922665383 0.0681276848465321 0.0 0.0 0.07312129266280581 0.017734518419438242 1.881962373444806e-10 9.725389063782645 -0.12679579920386286 LSYLEEAVMHLDHSDPITR ddPTM_KYSE-520_SHP099_60min_R1 2 LSYLEEAVMHLDHSDPITR 19 0 Q6P2E9;Q6P2E9-2;I3L0V0;I3L3M2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 0 ; 166.91 1.0717000000000001e-08 41641000.0 41684.0 36888.0 26986.0 24799.0 43864.0 32250.0 27144.2 25156.6 29327.0 20609.0 False True 39371.705425006105 35115.84510998317 28725.560739126646 27155.88950390879 47315.847247979946 32048.715787469904 29888.20063786293 25069.337626194567 24001.956073507703 20426.420293559368 1.9274892447709182 1.7191384787600552 1.4062944131323916 1.3294492678421626 2.316404272896463 1.5689834697847254 1.463212849257143 1.2272996083459202 1.1750446592482842 1.0 14.318148775141244 -7.152033807120074 1.64661990225847 1.0957780657806657 1.7086061092376512 0.5022413055220214 0.2610852747182763 0.3715441541111023 1.8801730208212035 0.19919745720077453 0.08522868734965 7.046382151365006e-08 7.152033807120074 0.6128280434569855 LSYLPATVEPAS(ph)PTPAHSLPR ddPTM_KYSE-520_SHP099_60min_R1 2 LSYLPATVEPASPTPAHSLPR 21 0 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5 E9PCV4 SPHK2 Sphingosine kinase 2 1 LSYLPATVEPAS(0.958)PT(0.042)PAHSLPR;LSYLPATVEPAS(0.915)PT(0.085)PAHSLPR 199.92 1.0358e-13 2071920000.0 941060.0 1254460.0 908440.0 847810.0 700990.0 1109630.0 902790.0 995940.0 1199650.0 1051160.0 True False 888857.5258434003 1194193.8586171519 966999.4959553923 928385.6074966287 756153.9249124895 1102704.3875736499 994052.8235813268 992485.3165941443 981823.8007155003 1041847.5401901059 0.8531550841701948 1.1462270750279329 0.9281583520165954 0.8910954546451453 0.7257817442027209 1.0584124308365113 0.9541250377189948 0.9526204922584408 0.9423872139068897 1.0 19.990712744153257 -9.226263443748955 14.47051219147544 1.0000210515774233 0.9415385070899006 0.028259024354740925 0.1062661827957146 0.0 0.0 0.10385446277166234 0.025188407041137707 5.939317693294762e-10 9.226263443748955 -0.05848254448752266 LSYLPATVEPASPT(ph)PAHSLPR ddPTM_KYSE-520_SHP099_60min_R1 1 LSYLPATVEPASPTPAHSLPR 21 0 E9PCV4;M0R344;Q9NRA0-4;Q9NRA0-2;Q9NRA0;Q9NRA0-5 E9PCV4 SPHK2 Sphingosine kinase 2 1 LSYLPATVEPAS(0.157)PT(0.823)PAHS(0.019)LPR 72.21 0.010276 150240000.0 176470.0 187120.0 145300.0 122550.0 115240.0 175820.0 138300.0 141200.0 196690.0 168970.0 True False 166680.8573157764 178130.47432715382 154666.27048821977 134197.1151539988 124308.73237409281 174722.6421628826 152280.71367792893 140710.21015632767 160976.05415140413 167473.0572566706 0.995269687232854 1.0636366066581657 0.9235292710467269 0.8013056986732331 0.7422610801424387 1.043288066898434 0.9092848495895207 0.8401961035480114 0.9612056816081818 1.0 17.3535694906717 -4.879058593650683 5.343595240967724 0.890787117325221 1.028007983642712 0.25205135167354964 0.08697155153738877 0.25741001730522717 10.874766472214196 0.023449908927264018 0.0507974599125125 1.321117381144691e-05 4.879058593650683 0.13722086631749109 LSYLSAPGS(ph)EYSMYSTDSR ddPTM_KYSE-520_SHP099_60min_R1 1 LSYLSAPGSEYSMYSTDSR 19 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 LSYLSAPGS(0.348)EY(0.076)S(0.107)MY(0.153)S(0.061)T(0.128)DS(0.128)R 90.79299999999999 0.0023329 55307000.0 149220.0 143210.0 151860.0 132080.0 140390.0 137080.0 119020.0 149680.0 186190.0 144750.0 True False 140942.46913730487 136329.97663740753 161649.13858459095 144632.84348869993 151437.89429016763 136224.43287275574 131051.7031232619 149160.79501557472 152382.589467944 143467.62761379583 0.9823991062061157 0.9502490485477161 1.1267290138771822 1.0081218034638502 1.0555544606747604 0.9495133859706788 0.913458355051659 1.0396825924877247 1.062139187790479 1.0 17.130365714823586 -6.250304918475834 24.65921250468254 0.9904700925150931 1.0252366723118573 0.06734841880894504 0.0585050367022934 1844.5616945866675 4085108.3659584345 0.02059499823383906 0.020408553738521497 5.61946643500834e-07 6.250304918475834 0.03476657979676423 LSYLSAPGSEYSMYS(ph)TDSR ddPTM_KYSE-520_SHP099_60min_R1 1 LSYLSAPGSEYSMYSTDSR 19 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 LSYLSAPGS(0.019)EY(0.003)S(0.072)MY(0.003)S(0.301)T(0.301)DS(0.301)R 66.436 0.016924 1266200000.0 1215800.0 1181800.0 1100200.0 1219600.0 1050500.0 1191100.0 1067500.0 1088800.0 1386300.0 992640.0 True False 1148357.1503627873 1125024.5540820358 1171120.65238224 1335510.4173138896 1133168.3734726203 1183665.9030838895 1175413.3177960184 1085023.2069278318 1134582.8657791023 983845.9818622331 1.167212319340031 1.1434966192092166 1.1903495811057048 1.3574385035206655 1.1517741540477182 1.2031008154786944 1.1947127288878945 1.102838479732457 1.1532118712641921 1.0 19.908072958095715 -8.130221247220103 0.7172396555708829 1.0013712334450178 1.2064685741397634 0.5012815824264194 0.059864745723112275 0.748178544344133 0.8523641660990874 0.0622486046105522 0.023785174559634373 7.409326839828896e-09 8.130221247220103 0.2050973406947456 LSYLSAPGSEYSMYST(ph)DSR ddPTM_KYSE-520_SHP099_60min_R1 1 LSYLSAPGSEYSMYSTDSR 19 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 LSYLSAPGSEYSMYS(0.084)T(0.458)DS(0.458)R 163.53 2.6995e-07 0.0 352130.0 285880.0 311800.0 288340.0 254890.0 249770.0 252800.0 255650.0 367110.0 242150.0 True False 332596.64694624825 272145.8956853715 331899.1268976393 315743.7469074181 274948.3928742842 248211.0927825228 278355.4910902419 254763.20981915874 300452.07808999956 240004.73938984942 1.385791996407196 1.1339188400080462 1.3828857202628908 1.315572966226066 1.1455956810405914 1.034192463921904 1.159791643272918 1.0614924124699743 1.251858937676906 1.0 17.872703369548613 -5.8356359728491265 4.807261958924991 1.1075362485735014 1.297996555752049 0.5215288840010739 0.09227880194365674 0.17229282563446546 7.3574229718050645 0.027680246363702955 0.03205731875483828 1.4600375560948904e-06 5.8356359728491265 0.19046030717854756 LSYLSAPGSEYSMYSTDS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 LSYLSAPGSEYSMYSTDSR 19 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 LSYLSAPGSEYSMYS(0.01)T(0.041)DS(0.949)R 161.99 3.9795e-08 227480000.0 541280.0 593920.0 477890.0 542300.0 509950.0 575330.0 542340.0 508200.0 640240.0 497430.0 True False 511254.1193850712 565387.1917079051 508695.55405103514 593840.028951559 550080.1637814012 571739.1520621724 597165.0199283292 506437.17281477177 523988.5551369915 493023.1571946843 1.0369779024054804 1.1467761370986593 1.0317883584729106 1.204487092108463 1.11572885726377 1.1596598328471717 1.2112311789292312 1.0272076786340292 1.0628071876349605 1.0 18.9112958857161 -7.29805412379006 24.6242296612419 1.03375551614226 1.1299380235465764 0.3801775548581664 0.05816889467606558 551.9807397592473 371216.2113163176 0.03133988632812659 0.015055959085029998 5.034378641195853e-08 7.29805412379006 0.09618250740431633 LSYS(ph)DSDLKR ddPTM_KYSE-520_SHP099_60min_R1 3 LSYSDSDLKR 10 1 A0A087WTF0;A2A3K4;A2A3K4-2 A0A087WTF0 PTPDC1 Protein tyrosine phosphatase domain-containing protein 1 1 LS(0.019)YS(0.94)DS(0.042)DLKR;LS(0.001)YS(0.989)DS(0.01)DLKR;LSYS(0.775)DS(0.225)DLKR 185.3 4.3926999999999995e-06 1554390000.0 3688680.0 3684700.0 3584230.0 3397950.0 3733750.0 3487500.0 3541700.0 3527290.0 4313200.0 3313820.0 True False 3484061.5671987263 3507681.4811525447 3815275.2007707655 3720890.1463690777 4027574.88286853 3465733.218877564 3899729.5996610397 3515054.654265671 3530031.6069237697 3284462.132912944 1.0607708130611815 1.0679622230997166 1.1616133925060816 1.1328765550629356 1.2262509719655468 1.0551904934899807 1.187326704297371 1.0702070878035113 1.0747670285341464 1.0 21.647225701907335 -7.934907074455844 1.4460267525777335 1.0026929359416414 1.1273046584298176 0.33359489371473705 0.054397203019117 0.46122183929341826 2.1611885773959414 0.05156534303443489 0.015502411487162974 1.1616971543961624e-08 7.934907074455844 0.1246117224881762 LSYSGRPGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 5 LSYSGRPGSR 10 1 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9K0F0;A0A087WXJ0 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 LSYSGRPGS(1)R;LSYSGRPGS(1)R;LSYS(0.027)GRPGS(0.973)R;LSYSGRPGS(1)R;LSYSGRPGS(1)R 121.21 0.00043444 8339090000.0 6004820.0 5948330.0 5729400.0 5586150.0 5323230.0 5112480.0 5114660.0 5584210.0 6191150.0 5490310.0 True False 5671720.664288099 5662563.298174641 6098726.291364126 6117056.016462761 5742137.915964443 5080571.115941836 5631699.747071273 5564839.678874411 5066993.22619078 5441670.124796546 1.0422757231172946 1.0405929003986352 1.1207453137545977 1.124113714388644 1.0552160980502527 0.9336418782150615 1.0349211947649677 1.0226345131647372 0.9311467086366662 1.0 22.375618072081426 -6.049446611954125 7.861102546147362 0.9893988421381487 1.082764765248615 0.5696262760127497 0.040452772751245654 0.24048640338671626 34.88309586600948 0.013832327195033835 0.013954168886043929 8.923873144806029e-07 6.049446611954125 0.09336592311046632 LT(ph)PAAIGIANAT(ph)PIPGDLLR ddPTM_KYSE-520_SHP099_60min_R1 6 LTPAAIGIANATPIPGDLLR 20 0 Q8IWY7;A0A0B4J292;Q6IQ55-3;Q6IQ55-2;Q6IQ55 Q8IWY7 TTBK2 Tau-tubulin kinase 2 2 LT(1)PAAIGIANAT(1)PIPGDLLR;LT(1)PAAIGIANAT(1)PIPGDLLR;LT(1)PAAIGIANAT(1)PIPGDLLR;LT(1)PAAIGIANAT(1)PIPGDLLR;LT(1)PAAIGIANAT(1)PIPGDLLR;LT(1)PAAIGIANAT(1)PIPGDLLR 176.7 6.052300000000001e-09 382914000.0 156615.0 143499.0 131324.0 133190.0 128850.0 145581.0 122909.0 154134.0 178160.0 134232.0 True False 147927.25374573775 136605.0926436096 139789.35516582915 145848.33755496642 138989.76194378574 144672.37497847006 135333.84119624423 153599.34512914598 145810.635048117 133042.80891091586 1.1118771090047292 1.0267754699547798 1.0507095897188303 1.096251189740176 1.0446995450678729 1.0874122108722257 1.017220263944235 1.1545106901042248 1.095967803459038 1.0 17.021531007879002 -7.242550242629136 24.99449622509486 1.0939294579414751 1.0619493949807655 0.029890469017117782 0.04525099106681075 1936.514955546249 2562443.0211049695 0.020036240621276964 0.011531096935386741 5.720707691415124e-08 7.242550242629136 -0.031980062960709654 LT(ph)PAAIGIANATPIPGDLLR ddPTM_KYSE-520_SHP099_60min_R1 3 LTPAAIGIANATPIPGDLLR 20 0 Q8IWY7;A0A0B4J292;Q6IQ55-3;Q6IQ55-2;Q6IQ55 Q8IWY7 TTBK2 Tau-tubulin kinase 2 1 LT(1)PAAIGIANATPIPGDLLR;LT(1)PAAIGIANATPIPGDLLR;LT(1)PAAIGIANATPIPGDLLR 178.77 8.673e-09 166237000.0 97292.0 155807.0 122008.0 99536.0 108806.0 146593.0 104439.0 117913.0 180827.0 126143.0 True False 91895.0188132064 148321.79784892517 129872.83089970208 108995.87151341027 117368.41317854528 145678.05871108762 114996.71334641537 117503.98732410122 147993.3750777158 125025.47115776908 0.7350103779832551 1.1863326446637306 1.0387709776019651 0.8717893282391144 0.9387560158076798 1.1651870403852118 0.9197862825991797 0.9398403880104037 1.1837057977647103 1.0 16.931862516280507 LT(ph)PEEEEILNK ddPTM_KYSE-520_SHP099_60min_R1 2 LTPEEEEILNK 11 0 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 1 LT(1)PEEEEILNK;LT(1)PEEEEILNK 227.93 1.3050000000000001e-09 1586440000.0 937200.0 929910.0 689910.0 686420.0 740620.0 874240.0 692960.0 782930.0 987410.0 863470.0 True False 885211.6477381178 885235.7277766336 734382.7024950288 751657.1504203017 798902.5804486349 868783.5438771371 763011.1594378724 780214.1985672357 808121.2345804959 855820.3275694954 1.0343428628905005 1.0343709996824648 0.8581038318880017 0.8782884984223102 0.9334933451715207 1.0151471236310277 0.8915553123221571 0.9116565398522621 0.9442650618915963 1.0 19.706948420908635 -4.73537325295088 24.501780330575457 0.9259882207262757 1.0343571574367338 0.444296045239978 0.0470021324115227 161.36743546225551 151679.90399957143 0.012274008972408995 0.03244842156634616 1.8391906357296372e-05 4.73537325295088 0.10836893671045811 LT(ph)PPPADLPLALPAHGLWSR ddPTM_KYSE-520_SHP099_60min_R1 5 LTPPPADLPLALPAHGLWSR 20 0 Q15742 Q15742 NAB2 NGFI-A-binding protein 2 1 LT(1)PPPADLPLALPAHGLWSR;LT(1)PPPADLPLALPAHGLWSR;LT(1)PPPADLPLALPAHGLWSR;LT(1)PPPADLPLALPAHGLWSR;LT(1)PPPADLPLALPAHGLWSR 173.89 5.1435e-09 4740071000.0 682581.0 733968.0 616908.0 881929.0 715195.0 631813.0 509410.0 600792.0 792827.0 514264.0 True False 644716.8712385114 698707.0755715718 656674.8767676991 965747.266998378 771476.7775970959 627869.620707868 560906.1341624999 598707.9927779072 648869.6023422407 509708.0210513373 1.2648748785799 1.3707986665197067 1.2883353795634294 1.894706826481565 1.5135660922224208 1.2318221310561437 1.1004459631723276 1.1746097138965876 1.273022152964878 1.0 18.959311530917173 -6.376514954169733 4.267035520341347 1.1538709032913468 1.4741847410477749 0.4423796857510456 0.17597269137359384 0.2477365303090496 7.5314051234705905 0.06855259334175991 0.059844158663567786 4.202280576111355e-07 6.376514954169733 0.3203138377564281 LT(ph)PVRPAAAS(ph)PIVSGAR ddPTM_KYSE-520_SHP099_60min_R1 6 LTPVRPAAASPIVSGAR 17 1 I3VM54;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 2 LT(1)PVRPAAAS(0.947)PIVS(0.053)GAR;LT(1)PVRPAAAS(1)PIVSGAR;LT(1)PVRPAAAS(1)PIVSGAR;LT(1)PVRPAAAS(0.994)PIVS(0.006)GAR;LT(1)PVRPAAAS(1)PIVSGAR;LT(1)PVRPAAAS(1)PIVSGAR 152.5 3.3688e-06 6784700000.0 5064730.0 4557650.0 4613210.0 4103770.0 4193780.0 3960750.0 4056550.0 4114740.0 5251140.0 4159360.0 True False 4783779.330611051 4338693.652827883 4910584.897996977 4493791.066956559 4523806.626655874 3936029.490084384 4466625.662112816 4100466.927327533 4297665.346467047 4122511.3063331135 1.1604041748198677 1.0524394793442202 1.1911634761202967 1.0900615506021962 1.0973424426286666 0.9547649958018912 1.0834720223207308 0.9946526819776782 1.0424872188621672 1.0 21.975092019704526 -6.079410233311152 6.049113727139178 1.0190017592039795 1.1199803092675156 0.5514631197266726 0.046879314185860194 0.18055005617515213 10.916953671403181 0.014616227219707574 0.014725419404875753 8.328940635992049e-07 6.079410233311152 0.10097855006353607 LT(ph)VSDGES(ph)GEEKK ddPTM_KYSE-520_SHP099_60min_R1 1 LTVSDGESGEEKK 13 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6 P46100-2 ATRX Transcriptional regulator ATRX 2 LT(0.639)VS(0.361)DGES(1)GEEKK 180.7 5.2554999999999996e-08 0.0 952990.0 744100.0 754140.0 810430.0 774230.0 744040.0 780460.0 812380.0 977560.0 792060.0 True False 900125.7449615347 708352.3190831289 802753.0710666637 887453.0235353364 835157.4962338932 739396.170372376 859356.5133555791 809562.0433909174 800059.7462822032 785042.9646133545 1.1465942445645128 0.9023102569067708 1.02255941044199 1.1304515339137142 1.0638366737611882 0.9418543999519055 1.094661760046248 1.0312327858254724 1.0191286112298894 1.0 19.582412087853058 LTAEAIQT(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 3 LTAEAIQTPLK 11 0 Q53HL2 Q53HL2 CDCA8 Borealin 1 LTAEAIQT(1)PLK;LTAEAIQT(1)PLK;LTAEAIQT(1)PLK 139.86 0.0053831 0.0 1507790.0 1814640.0 1470700.0 1299290.0 1109040.0 1422600.0 1230830.0 1689250.0 1891970.0 1997350.0 True False 1424149.8829951521 1727461.9705698285 1565503.6752032002 1422774.1309542179 1196315.1384255826 1413721.025713325 1355254.308143207 1683390.386023912 1548435.9406824536 1979655.032914787 0.71939295448777 0.8726075714445881 0.7907961989206764 0.7186980091472635 0.604304850357773 0.7141249370259236 0.6845911462401455 0.8503453167521497 0.7821746288809627 1.0 20.91681762303174 -8.268908586955764 1.082029218061959 0.9979758306911563 0.7352865059083994 0.5384202912071905 0.07234593240971236 0.808730515457907 1.7724129457685094 0.07590558477337775 0.024109639107092965 5.383830928629101e-09 8.268908586955764 -0.26268932478275686 LTAEDLFEAR ddPTM_KYSE-520_SHP099_60min_R1 3 LTAEDLFEAR 10 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;; 162.49 0.00048237 405420000.0 655950.0 771610.0 615260.0 423130.0 654190.0 750930.0 572580.0 625110.0 726850.0 682200.0 False True 619563.1458960936 734540.697389778 654920.644050807 463344.1479813262 705671.0311680657 746243.1673266591 630461.9742422898 622941.6393117714 594872.3623974182 676156.2387435683 0.9163017515705603 1.0863475855147022 0.9685936570928914 0.6852619578609688 1.0436508468506358 1.1036549314598147 0.9324205532937365 0.9212983680655226 0.8797853636650731 1.0 19.36699712156039 -10.91302903443125 3.9293318656624745 1.0220511523333315 0.9515639101841005 0.01755522232775053 0.11342976443910154 0.03197672223716941 0.0007077655920395725 0.16027586692245238 0.027695902715128742 1.2217179803970249e-11 10.91302903443125 -0.07048724214923108 LTAGVPDT(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 7 LTAGVPDTPTR 11 0 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 1 LTAGVPDT(0.994)PT(0.006)R;LTAGVPDT(1)PTR;LTAGVPDT(1)PTR;LTAGVPDT(0.999)PT(0.001)R;LTAGVPDT(0.998)PT(0.002)R;LTAGVPDT(1)PTR;LTAGVPDT(1)PTR 227.48 1.4394000000000002e-09 18287990000.0 7560870.0 10267940.0 8124640.0 7903210.0 7381160.0 9765870.0 6870460.0 10007210.0 11728980.0 8318530.0 True False 7141453.468879335 9774652.749907851 8648367.294283634 8654328.702213278 7962015.298944469 9704917.582864467 7564993.146027932 9972497.324210381 9599292.895524612 8244834.2959184 0.8661730742623543 1.1855487204572184 1.0489437366333734 1.0496667842672833 0.9656974310431028 1.177090676967138 0.9175433822572974 1.2095449060931716 1.164279662997804 1.0 22.975059068098005 -7.282501587286625 24.98374638651665 1.1401841992357584 1.0407284001516486 0.12935615124083422 0.1077180873589631 1543.1760845707543 1830487.5712754638 0.054795802703161534 0.02636927559684839 5.217931971531167e-08 7.282501587286625 -0.09945579908410984 LTALNDSSLDLSMDS(ph)DNSMSVPS(ph)PTSATK ddPTM_KYSE-520_SHP099_60min_R1 2 LTALNDSSLDLSMDSDNSMSVPSPTSATK 29 0 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 LT(0.002)ALNDS(0.003)S(0.011)LDLS(0.139)MDS(0.525)DNS(0.258)MS(0.258)VPS(0.62)PT(0.145)S(0.036)AT(0.003)K;LTALNDSSLDLS(0.009)MDS(0.464)DNS(0.464)MS(0.287)VPS(0.731)PT(0.036)S(0.009)AT(0.001)K 74.65 0.012216 264191000.0 197867.0 213725.0 190287.0 169125.0 215726.0 200691.0 178201.0 226671.0 252490.0 207142.0 True False 186890.9230719146 203457.33019223463 202553.20448996508 185198.58915071472 232702.40888696274 199438.41302645323 196215.296154162 225884.73120640888 206644.18075493412 205306.88303403754 0.9103003285132444 0.990991276987551 0.9865875001199257 0.9020573807065733 1.1334369576317778 0.9714161068500982 0.9557170868043023 1.1002297042762066 1.0065136526410314 1.0 17.64742246989411 -1.597652929731771 0.4013768178512761 1.0250304075773644 3.1540869295152395e-13 0.19109126847297486 0.06256375761006028 75.80722893501269 1.6098416846783454 0.04484722947552054 57.42767606690706 0.02525498240443046 1.597652929731771 -1.025030407577049 LTALNDSSLDLSMDSDNS(ph)MS(ph)VPSPTSATK ddPTM_KYSE-520_SHP099_60min_R1 1 LTALNDSSLDLSMDSDNSMSVPSPTSATK 29 0 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 LT(0.001)ALNDS(0.007)S(0.017)LDLS(0.179)MDS(0.491)DNS(0.558)MS(0.444)VPS(0.209)PT(0.071)S(0.021)AT(0.002)K 57.507 0.034391000000000005 38022000.0 67679.0 69163.0 54290.0 52837.0 65144.0 60119.0 58821.0 62807.0 83399.0 59859.0 True False 63924.710955258415 65840.30566422046 57789.6202670713 57858.61259397668 70270.46218134245 59743.77502098923 64767.20071763894 62589.137176264 68255.84391770273 59328.69582959728 1.0774669839172215 1.109754811623126 0.974058496634639 0.9752213795522668 1.1844262072298353 1.0069962635380378 1.0916673594791637 1.0549555539874211 1.1504693127545873 1.0 15.856442449203039 LTAS(ph)PSDPK ddPTM_KYSE-520_SHP099_60min_R1 3 LTASPSDPK 9 0 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 LTAS(0.881)PS(0.118)DPK;LTAS(0.849)PS(0.151)DPK;LTAS(0.915)PS(0.085)DPK 133.91 0.00050929 982150000.0 3799530.0 3697870.0 3087350.0 2684760.0 2924970.0 3347070.0 3019740.0 3466730.0 4179900.0 3639020.0 True False 3588762.4967247294 3520218.7745839697 3286365.5209346577 2939918.7831974737 3155148.4981972487 3326179.6945974207 3325004.7890223386 3454704.7227708627 3420935.5267042243 3606781.113914721 0.9950042387877442 0.9760001129547896 0.9111630057771121 0.8151087327854366 0.874782360932549 0.9222017054944757 0.9218759564295964 0.9578359799664145 0.9484732837006612 1.0 21.782280441728375 -7.770278566853641 1.0857455603567754 0.9953936129762845 0.9124909878142506 0.22526657720882748 0.04743063276358875 0.7931771632577225 1.9586949950251236 0.050734246900838165 0.01703369229123495 1.6971547076961188e-08 7.770278566853641 -0.08290262516203384 LTAT(ph)PTPLGGMTGFHMQTEDR ddPTM_KYSE-520_SHP099_60min_R1 3 LTATPTPLGGMTGFHMQTEDR 21 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LT(0.001)AT(0.929)PT(0.069)PLGGMTGFHMQTEDR;LT(0.002)AT(0.841)PT(0.157)PLGGMTGFHMQTEDR;LTAT(0.864)PT(0.136)PLGGMTGFHMQTEDR 248.47 1.1853e-26 2333490000.0 1346960.0 1843630.0 1303840.0 1240580.0 1200950.0 1696710.0 1254600.0 1509760.0 1731570.0 1636500.0 True False 1272241.4437018097 1755059.2474549534 1387887.6126177593 1358484.3502060212 1295457.9325292178 1686120.2035273837 1381427.2117160503 1504522.9949406323 1417160.5373275026 1622001.8831777333 0.7843649609144147 1.0820328050523231 0.8556633793166067 0.8375356183585659 0.7986784392575617 1.0395303612250026 0.851680399414603 0.9275716696413797 0.8737107842014848 1.0 20.629344063879113 -6.236987093502146 24.983176449445867 0.9285457792740777 0.8805587644620718 0.10747265881250934 0.09239025993907367 2556.686355478435 2612196.678250303 0.030416874452830055 0.0304019012038153 5.794459163241226e-07 6.236987093502146 -0.047987014812005846 LTATPT(ph)PLGGMTGFHMQTEDR ddPTM_KYSE-520_SHP099_60min_R1 1 LTATPTPLGGMTGFHMQTEDR 21 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 LT(0.002)AT(0.396)PT(0.602)PLGGMTGFHMQTEDR 264.98 1.9987999999999996e-35 634630000.0 308590.0 406270.0 308510.0 301060.0 283260.0 435880.0 281690.0 356760.0 413650.0 397490.0 True False 291471.89754108584 386752.17937629763 328397.048233453 329672.65188301046 305550.95047106507 433159.5112385234 310165.9742294711 355522.48282840964 338541.58726792544 393968.5478425408 0.7398354491424523 0.9816828817788588 0.833561587674519 0.836799418858107 0.7755719387863064 1.0994773913059839 0.7872861321747862 0.9024133646590056 0.8593112042112354 1.0 18.587720932334665 LTDCVVMRDPASK ddPTM_KYSE-520_SHP099_60min_R1 1 LTDCVVMRDPASK 13 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 92.935 0.0025898 465210000.0 292130.0 288880.0 231910.0 153510.0 274890.0 285960.0 228270.0 242830.0 304490.0 234160.0 False True 275924.9665532829 275001.77118227974 246859.28966911967 168099.5442455356 296522.27908985055 284175.217568524 251345.75930051235 241987.67940694813 249202.29156825962 232085.52457372306 1.1888934782127443 1.1849156542071375 1.0636565555845499 0.7242999948156524 1.2776422813722657 1.2244418004547044 1.0829876605280102 1.042665973465655 1.0737519801201532 1.0 17.824297017468375 -7.869828115831583 1.3478158708204144 1.0069264156445301 1.1019418405749617 0.04579423849910025 0.14390409689352623 1.7071205739139075 6.756079777511957 0.14462810481266486 0.044640392756996945 1.3494968779855941e-08 7.869828115831583 0.09501542493043158 LTDEDFS(ph)PFGS(ph)GGGLFSGGK ddPTM_KYSE-520_SHP099_60min_R1 1 LTDEDFSPFGSGGGLFSGGK 20 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 2 LT(0.002)DEDFS(0.998)PFGS(1)GGGLFSGGK 70.094 0.015535 89888000.0 223950.0 232540.0 220790.0 191440.0 207080.0 204960.0 191530.0 223360.0 274440.0 208880.0 True False 211527.0470667432 221368.42935034411 235022.47667649062 209634.40004146498 223376.01787597308 203680.76861394846 210891.72155266636 222585.21629261592 224608.61406940536 207029.48570618095 1.0217242550993206 1.0692603934905833 1.135212580347312 1.012582334957741 1.0789575074972235 0.9838249267691993 1.0186554868419408 1.0751377540903129 1.0849112304136859 1.0 17.659476729372468 LTDEDFS(ph)PFGSGGGLFSGGK ddPTM_KYSE-520_SHP099_60min_R1 5 LTDEDFSPFGSGGGLFSGGK 20 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 LTDEDFS(0.834)PFGS(0.166)GGGLFSGGK;LTDEDFS(1)PFGSGGGLFSGGK;LTDEDFS(0.998)PFGS(0.002)GGGLFSGGK;LTDEDFS(1)PFGSGGGLFSGGK;LTDEDFS(1)PFGSGGGLFSGGK 299.06 3.1546999999999996e-44 3732460000.0 10698410.0 11093240.0 9555940.0 8629890.0 9551390.0 11373060.0 9319600.0 11690670.0 14553620.0 12362890.0 True False 10104947.870548403 10560304.099107303 10171931.182444591 9450072.150928965 10303030.05302488 11302076.513917608 10261716.118530933 11650117.794392882 11911049.474904453 12253364.412782876 0.8246672122153476 0.8618289429220476 0.8301337363176022 0.7712226481300533 0.840832746496678 0.922365167082367 0.8374611064228018 0.9507688992126375 0.9720635960584576 1.0 23.54667458937556 -7.298766956342527 0.8386893421171142 1.0044972362830336 0.8270681951940834 0.7627618835026726 0.034688403458090905 0.3011343456763612 0.3909850820042637 0.03299065529134405 0.014211232792479671 5.026122203243215e-08 7.298766956342527 -0.1774290410889502 LTDEDFSPFGS(ph)GGGLFSGGK ddPTM_KYSE-520_SHP099_60min_R1 8 LTDEDFSPFGSGGGLFSGGK 20 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 LTDEDFSPFGS(1)GGGLFSGGK;LTDEDFS(0.244)PFGS(0.756)GGGLFSGGK;LTDEDFSPFGS(1)GGGLFSGGK;LTDEDFSPFGS(1)GGGLFSGGK;LTDEDFSPFGS(1)GGGLFSGGK;LTDEDFSPFGS(1)GGGLFSGGK;LTDEDFSPFGS(1)GGGLFSGGK;LTDEDFS(0.002)PFGS(0.998)GGGLFSGGK 318.13 1.1631999999999998e-53 1251354000.0 1986283.0 1827867.0 1719243.0 1544252.0 1673315.0 1679735.0 1543610.0 1646336.0 2068141.0 1723787.0 True False 1876099.9224330059 1740053.5256356993 1830068.1546660622 1691017.2457837046 1804995.3706400143 1669251.1507989382 1699653.1629818352 1640625.244673711 1692618.7279919633 1708515.588265991 1.0980876822652228 1.0184592622896211 1.0711451316188678 0.989758160474236 1.0564699456280306 0.9770183908553605 0.9948127922595366 0.9602635503834159 0.9906955134719245 1.0 20.704311980106542 -4.670821520469325 0.441123716181698 0.9784426543740716 1.1248109456783795 0.5606845479592886 0.028184668847829792 2.645560808161433 0.5232699927855224 0.020849499714469297 0.19602793360694848 2.1339216986219754e-05 4.670821520469325 0.14636829130430784 LTDPNSAFS(ph)RCHS(ph)IINPK ddPTM_KYSE-520_SHP099_60min_R1 1 LTDPNSAFSRCHSIINPK 18 1 Q9HC84 Q9HC84 MUC5B Mucin-5B 2 LT(0.026)DPNS(0.031)AFS(0.944)RCHS(0.999)IINPK 60.332 0.032677 523610000.0 497180.0 649900.0 553670.0 482560.0 534570.0 541820.0 665220.0 534620.0 793700.0 131050.0 True False 469600.43429624225 618677.8284802118 589360.4541033226 528422.3573130452 576637.6177127634 538438.300402076 732466.9295215606 532765.5280012463 649584.0875487787 129888.99895535721 3.6153980558249104 4.763127235223755 4.537416246512805 4.068261065701674 4.439464637886335 4.145372623798086 5.639176030398919 4.101698621792886 5.00107085875718 1.0 16.986919720275406 -5.25318803944018 22.261544422932374 4.271285152248944 4.351094718798155 0.0 1.1817305971134506 3523.0188483010793 9504687.103775676 0.3001402689628347 0.5070740414206987 5.582284424327465e-06 5.25318803944018 0.07980956654921112 LTEDLEYHELLDR ddPTM_KYSE-520_SHP099_60min_R1 1 LTEDLEYHELLDR 13 0 P22059;H0YCV6 P22059 OSBP Oxysterol-binding protein 1 0 138.02 2.2745e-05 113400000.0 163690.0 134430.0 84540.0 74617.0 149630.0 135050.0 89274.0 102860.0 112700.0 101500.0 False True 154609.78939207506 127971.7810164561 89989.5836687826 81708.57724558096 161405.02972175906 134207.1028557461 98298.68715027794 102503.20266770446 92236.52093580381 100600.7889658051 1.5368645810981463 1.2720753219932956 0.8945216493219618 0.8122061276612281 1.6044111719304879 1.3340561663126125 0.9771164636063674 1.01891052467338 0.916856834663152 1.0 16.618282094019527 -4.446802586225519 3.7915088547489373 1.0857704197748248 1.5189842796794746 0.29538771308098566 0.22311105878516352 0.3380055212885317 8.682125247120561 0.06154070839170158 0.29141383437675766 3.574352777295178e-05 4.446802586225519 0.4332138599046498 LTEGCSFR ddPTM_KYSE-520_SHP099_60min_R1 2 LTEGCSFR 8 0 P42677;H0YMV8;Q71UM5;C9J1C5 P42677 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like 0 ; 117.4 0.007456699999999999 840260000.0 932360.0 711150.0 740400.0 532340.0 705040.0 684690.0 589000.0 821770.0 940500.0 773220.0 False True 880640.1321864184 676985.2865420879 788127.3686818848 582933.433546143 760522.636871142 680416.5957371396 648541.868086046 818919.4716725604 769728.9080756296 766369.8723560572 1.1491058873166025 0.8833662582022261 1.0283903335851896 0.7606424189850078 0.9923702174422137 0.8878436121781892 0.846251779303678 1.0685695004618978 1.0043830477172149 1.0 19.547681321188293 -7.278153894118556 24.950320642345183 1.0273572059374587 0.9306355484329327 0.13608002822507792 0.10205634057322395 1543.0918592722294 2303412.8740029936 0.053405873282996986 0.025766279055909284 5.270430683500259e-08 7.278153894118556 -0.09672165750452599 LTEVPVEPVLTVHPES(ph)K ddPTM_KYSE-520_SHP099_60min_R1 5 LTEVPVEPVLTVHPESK 17 0 Q9H307 Q9H307 PNN Pinin 1 LTEVPVEPVLTVHPES(1)K;LTEVPVEPVLTVHPES(1)K;LTEVPVEPVLTVHPES(1)K;LTEVPVEPVLTVHPES(1)K;LTEVPVEPVLTVHPES(1)K 234.22 2.5305e-23 1837760000.0 3269230.0 2933810.0 2656960.0 2552930.0 2539670.0 2647350.0 2363700.0 2757140.0 3153440.0 2687910.0 True False 3087879.29485157 2792865.3638614123 2828231.892886312 2795559.699633605 2739527.5802543606 2630826.9066653806 2602645.8634889405 2747576.1248613163 2580854.787753339 2664097.2085623373 1.1590715552447592 1.0483346309155752 1.0616098706144994 1.0493459813135761 1.0283136709312228 0.9875116036344219 0.9769335199647018 1.0313347861446946 0.9687539851993916 1.0 21.345215294282966 -1.0000000000000002 0.41018209914523757 0.9916186420725953 3.684315898931139 0.8119116365181109 0.022798123748793152 31.593844803460005 0.41289003851305944 0.015965333915289533 69.28073704435232 0.09999999999999995 1.0000000000000002 2.6926972568585437 LTFDEYR ddPTM_KYSE-520_SHP099_60min_R1 3 LTFDEYR 7 0 P12429;D6RA82 P12429 ANXA3 Annexin A3;Annexin 0 ;; 153.15 0.0094293 2245660000.0 3686080.0 3921980.0 2755130.0 2564530.0 4082230.0 3862690.0 3180350.0 3170830.0 3123530.0 3230230.0 False True 3481605.7943816967 3733562.1937880004 2932730.0881638615 2808262.1601459426 4403478.2762885615 3838581.518917896 3501850.8152248873 3159831.130807289 2556375.6897835922 3201612.6752809114 1.0874537764241636 1.1661504911615879 0.9160165159286615 0.8771398807319951 1.3753938164622608 1.198952499331012 1.093777158699446 0.9869498441219294 0.7984650078133809 1.0 21.610367353364847 -7.431861912532834 3.53546830603861 0.8967043565211792 1.1026628866089347 0.25728497975192244 0.13961720722243687 0.35536383863902543 8.206005541479193 0.09781889280041613 0.04019611914556589 3.6994578835800754e-08 7.431861912532834 0.20595853008775555 LTFDSSFS(ph)PNTGK ddPTM_KYSE-520_SHP099_60min_R1 5 LTFDSSFSPNTGK 13 0 C9JI87;P21796 C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 1 LTFDS(0.029)S(0.153)FS(0.818)PNTGK;LTFDSS(0.001)FS(0.998)PNT(0.002)GK;LTFDSS(0.004)FS(0.995)PNTGK;LTFDSS(0.003)FS(0.996)PNT(0.001)GK;LTFDS(0.001)S(0.009)FS(0.989)PNT(0.001)GK 196.74 1.5357e-08 2378210000.0 2671220.0 3372130.0 3006500.0 4039830.0 3659430.0 4121590.0 4062770.0 5009570.0 6029560.0 3730090.0 True False 2523042.1016549445 3210127.813129676 3200303.8005700805 4423774.228580819 3947406.3216914856 4095865.6279838127 4473474.440414165 4992192.970912424 4934743.89683837 3697044.3045661114 0.6824484355080108 0.8682957380751269 0.8656384768279566 1.1965705207041055 1.0677195068547487 1.107875721944995 1.210013749331894 1.350320028555436 1.3347808385048596 1.0 21.817940901893103 -4.690163701656032 0.6203228993569657 1.2379232836288474 0.5005329601749571 0.714761161045389 0.10987854950210645 1.1726722014901116 0.48865069647129206 0.05826690538987377 0.5734951417449484 2.0409684831367898e-05 4.690163701656032 -0.7373903234538903 LTFDSSFS(ph)PNTGKK ddPTM_KYSE-520_SHP099_60min_R1 2 LTFDSSFSPNTGKK 14 1 C9JI87;P21796 C9JI87 VDAC1 Voltage-dependent anion-selective channel protein 1 1 LT(0.03)FDS(0.156)S(0.13)FS(0.682)PNT(0.002)GKK;LTFDS(0.014)S(0.044)FS(0.941)PNT(0.001)GKK 83.751 0.0062563 1589310000.0 2601110.0 2860100.0 2641600.0 3408900.0 3056200.0 2802800.0 2877400.0 3177800.0 4869900.0 2406550.0 True False 2456821.2431157664 2722696.502902378 2811881.7627094374 3732880.831076838 3296705.552600685 2785306.685554128 3168275.672717812 3166776.9535040925 3985648.920188735 2385229.839267568 1.0300144676498688 1.141481822036251 1.178872457663401 1.564998378614571 1.3821332847374588 1.167730941354235 1.328289467354095 1.32766113410543 1.6709705935142112 1.0 21.18569685945232 -5.033687998861105 11.069085118224397 1.3567794820800636 1.1042042260325078 0.2724930229363244 0.17728475532532795 1.0976221891338571 359.8600234661956 0.04690481598731329 0.08244806898778968 9.253627242681154e-06 5.033687998861105 -0.2525752560475558 LTFDTTFS(ph)PNTGK ddPTM_KYSE-520_SHP099_60min_R1 5 LTFDTTFSPNTGK 13 0 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880-2;P45880;P45880-1 Q5JSD2 VDAC2 Voltage-dependent anion-selective channel protein 2 1 LTFDT(0.005)T(0.043)FS(0.866)PNT(0.086)GK;LTFDT(0.002)T(0.035)FS(0.963)PNTGK;LTFDTT(0.004)FS(0.996)PNTGK;LTFDT(0.002)T(0.035)FS(0.962)PNTGK;LTFDTT(0.001)FS(0.999)PNTGK 354.61 8.2837e-53 1355158000.0 1944590.0 2285030.0 1847120.0 2336290.0 2256710.0 2523140.0 2354160.0 3054550.0 3629050.0 2377310.0 True False 1836719.716255939 2175253.7289000438 1966188.310696493 2558330.299168799 2434300.23807653 2507392.147348738 2592141.4671875127 3043954.4789873324 2970106.000905752 2356248.882919195 0.7795100634617159 0.9231850441049702 0.8344569730938398 1.0857640369464037 1.0331252592725415 1.0641457129275278 1.1001136110783283 1.2918645823255002 1.2605230383074133 1.0 21.1680605037342 -5.426328012772856 0.6417030866868979 1.186797044747234 0.7731777537914669 0.6562133727798323 0.0915278214421477 0.6649070665933908 0.5021123142026351 0.0561789880588706 0.16774596424132657 3.7468990056446363e-06 5.426328012772856 -0.4136192909557671 LTFDTTFS(ph)PNTGKK ddPTM_KYSE-520_SHP099_60min_R1 2 LTFDTTFSPNTGKK 14 1 Q5JSD2;Q5JSD1;A0A0A0MR02;P45880-2;P45880;P45880-1 Q5JSD2 VDAC2 Voltage-dependent anion-selective channel protein 2 1 LTFDTTFS(0.998)PNT(0.002)GKK;LTFDT(0.003)T(0.01)FS(0.987)PNTGKK 290.63 9.0577e-33 2014490000.0 1167260.0 1412760.0 1251560.0 1478610.0 1355940.0 1280920.0 1273690.0 1595330.0 2269300.0 1128070.0 True False 1102509.760924878 1344888.8890040065 1332237.560166803 1619136.6498396948 1462644.7637567453 1272925.303146851 1402447.015216497 1589796.1725828229 1857252.3243976873 1118076.1774251796 0.986077499177069 1.2028598016471064 1.1915445361109618 1.448145200238868 1.3081798837044123 1.1384960424416464 1.2543394122269877 1.4219032698147351 1.6611142978421722 1.0 20.092587055402895 -4.072313325130698 1.0676672674399597 1.3246938837740192 0.7120848830483284 0.2473132200130721 0.17137393005335963 3.5718543088304493 2.5718533768955014 0.05481681013198785 2.721284641355011 8.466163957737765e-05 4.072313325130698 -0.6126090007256908 LTGIKHELQANCYEEVKDR ddPTM_KYSE-520_SHP099_60min_R1 1 LTGIKHELQANCYEEVKDR 19 2 E9PP50;P23528;G3V1A4;E9PK25 E9PP50 CFL1 Cofilin-1 0 144.92 1.4908000000000002e-06 726000000.0 482870.0 517360.0 418200.0 323620.0 483880.0 347250.0 290580.0 238350.0 469900.0 246210.0 False True 456084.2385225199 492505.2490268074 445157.8411436578 354376.7475000994 521958.6030994105 345082.68394415255 319954.66218750976 237523.21948130836 384578.0052150326 244028.77094848145 1.8689773207881577 2.018226158794954 1.8242022832530598 1.4521924858397712 2.1389223945630764 1.4141065522843832 1.3111349983197578 0.9733410472794353 1.5759535390858623 1.0 17.896691725740236 -6.4653906771854475 4.447952607692943 1.2264112553272872 1.8442447305409055 0.6444724469948767 0.2280809754935822 0.14230352008328506 5.772290478889382 0.08252149011100689 0.07010182296520062 3.4245958244415197e-07 6.4653906771854475 0.6178334752136183 LTGMAFR ddPTM_KYSE-520_SHP099_60min_R1 4 LTGMAFR 7 0 P04406;P04406-2;E7EUT5;O14556 P04406 GAPDH;GAPDHS Glyceraldehyde-3-phosphate dehydrogenase;Glyceraldehyde-3-phosphate dehydrogenase, testis-specific 0 ;;; 169.69 0.0048751 15173060000.0 5585150.0 6343790.0 3999330.0 3790170.0 5832110.0 5683200.0 4519620.0 5043240.0 4726480.0 4883550.0 False True 5275330.595779499 6039024.806177075 4257133.210954253 4150386.6172438324 6291063.876833313 5647729.040723999 4976507.296840506 5025746.177541062 3868270.3768647546 4840285.546344405 1.0898800381237135 1.2476587896220317 0.8795210882071669 0.85746730797285 1.2997299057252105 1.1668173265086417 1.028143329394891 1.0383160516917695 0.7991822672086446 1.0 22.20666072925036 -7.600031006461239 6.398030701869852 0.9008323869396763 1.0796947934038896 0.2067046680940955 0.14025066708265854 0.35407453288381996 23.06501913624479 0.10235659371286973 0.037666642813469216 2.511707101740732e-08 7.600031006461239 0.17886240646421336 LTGS(ph)PGVK ddPTM_KYSE-520_SHP099_60min_R1 2 LTGSPGVK 8 0 H7C5W6;F5H619;Q86XA9-2;Q86XA9 H7C5W6 HEATR5A HEAT repeat-containing protein 5A 1 LT(0.069)GS(0.931)PGVK;LT(0.001)GS(0.999)PGVK 85.154 0.0052503 631120000.0 1998510.0 1912630.0 1819990.0 1710570.0 1880110.0 1988000.0 1762520.0 2035290.0 2229700.0 1894520.0 True False 1887648.6663690836 1820744.3838838385 1937309.4674869599 1873142.0584983777 2028063.960637415 1975592.1545888411 1940692.7221375532 2028230.054030255 1824842.6861629258 1877736.0267142563 1.0052790379019212 0.9696487461391768 1.0317262064130217 0.9975534536534844 1.0800580762069145 1.0521138895363358 1.0335279797200574 1.080146530276324 0.971831322508156 1.0 20.840562831614115 -5.711527049968727 24.99988534550047 1.0409412029014846 1.0009997158900026 0.19635209418806854 0.03414165383828115 156.5329118789082 78402.52895297538 0.009687240611352406 0.012506149569351466 1.943000668545072e-06 5.711527049968727 -0.039941487011482035 LTGS(ph)QLSITQVASIK ddPTM_KYSE-520_SHP099_60min_R1 4 LTGSQLSITQVASIK 15 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 LT(0.083)GS(0.913)QLS(0.002)IT(0.002)QVASIK;LT(0.309)GS(0.691)QLSITQVASIK;LTGS(1)QLSITQVASIK;LT(0.001)GS(0.999)QLSITQVASIK 357.3 2.1421999999999995e-67 2582859000.0 1726170.0 2386660.0 1708680.0 1355070.0 1529310.0 1731500.0 1250830.0 1837680.0 2115640.0 1910820.0 True False 1630415.9090654154 2272001.271150304 1818824.246784662 1483855.4453833494 1649657.9964163846 1720693.0662326864 1377276.1033243942 1831305.5169977376 1731493.106944313 1893891.6213954657 0.8608813147734848 1.1996469309454139 0.9603634264164006 0.783495437975489 0.8710413931716305 0.9085488561192523 0.7272201258853362 0.9669537033214112 0.9142514214559472 1.0 20.852922343768796 -5.000766470058715 24.999757482948407 0.8743136762898186 1.0426994010760233 0.2365677130475049 0.10711293762189955 33.199478852112506 1083019.3034982604 0.026546027173084286 0.05421842133639196 9.982366939226766e-06 5.000766470058715 0.16838572478620473 LTGS(ph)T(ph)SSLNK ddPTM_KYSE-520_SHP099_60min_R1 5 LTGSTSSLNK 10 0 Q9NV70-2;Q9NV70 Q9NV70-2 EXOC1 Exocyst complex component 1 2 LT(0.011)GS(0.985)T(0.7)S(0.207)S(0.097)LNK;LT(0.01)GS(0.966)T(0.655)S(0.245)S(0.124)LNK;LT(0.001)GS(0.98)T(0.721)S(0.208)S(0.09)LNK;LTGS(0.987)T(0.613)S(0.234)S(0.166)LNK;LTGS(0.976)T(0.793)S(0.168)S(0.062)LNK 177.04 5.5568999999999996e-05 8169230000.0 26920700.0 23866400.0 21972200.0 23721800.0 22951900.0 23692500.0 22296000.0 24006500.0 27950900.0 22958100.0 True False 25427355.10591506 22719822.31980328 23388563.168763034 25976312.739780795 24758083.951552752 23544626.319213346 24549897.26799064 23923227.0546592 22875721.14484967 22754709.095131498 1.1174546332194328 0.9984668327253772 1.0278559515299255 1.1415796453903504 1.088042209111339 1.0347144505684256 1.0788930399133616 1.0513527971130034 1.0053181101640214 1.0 24.4396618066726 -7.707388542087584 3.1431832461170037 0.9993806440677945 1.0673563701862994 0.3029924016815704 0.039957202306795114 0.3335274347863613 6.194318227671684 0.0364693686790819 0.010832645278955434 1.9616045396745964e-08 7.707388542087584 0.06797572611850489 LTGS(ph)TS(ph)SLNK ddPTM_KYSE-520_SHP099_60min_R1 1 LTGSTSSLNK 10 0 Q9NV70-2;Q9NV70 Q9NV70-2 EXOC1 Exocyst complex component 1 2 LT(0.281)GS(0.697)T(0.079)S(0.66)S(0.282)LNK 122.46 0.0011480000000000001 847150000.0 2863900.0 2492800.0 2397300.0 2427000.0 2354300.0 2282000.0 2277900.0 2458400.0 2868100.0 2243200.0 True False 2705033.757956888 2373042.146230917 2551833.7938156174 2657661.350295845 2539570.015865383 2267757.1915350817 2508172.362161639 2449872.3841948737 2347325.338917292 2223326.993183193 1.2166603321286644 1.067338341821404 1.1477546045361926 1.195353341386282 1.1422386467001047 1.0199836544458434 1.128116723204366 1.101894769283276 1.055771528935817 1.0 21.084288715957612 -6.12642048297441 7.381228675071319 1.071901879629029 1.1519991723051994 0.4519107199580099 0.05044146005274653 0.29025744181185825 16.151384463700843 0.016448842670632 0.01647339628126289 7.474454749817655e-07 6.12642048297441 0.0800972926761705 LTGS(ph)TSS(ph)LNK ddPTM_KYSE-520_SHP099_60min_R1 2 LTGSTSSLNK 10 0 Q9NV70-2;Q9NV70 Q9NV70-2 EXOC1 Exocyst complex component 1 2 LTGS(0.976)T(0.034)S(0.125)S(0.864)LNK;LTGS(0.969)T(0.166)S(0.242)S(0.623)LNK 202.72 9.807700000000002e-07 5220000000.0 17063800.0 15050500.0 14348500.0 14448000.0 13798800.0 13806700.0 14248100.0 15073500.0 17063500.0 13936800.0 True False 16117236.998158012 14327451.388738938 15273427.268411737 15821133.576050399 14884687.0555678 13720527.263964681 15688436.996055663 15021213.54668136 13965198.535830399 13813330.79466633 1.166788607160648 1.0372191618165783 1.1057019842244846 1.145352544670785 1.0775595891264074 0.9932815964461315 1.1357461302608751 1.0874432654925938 1.0109942883017549 1.0 23.719557901370834 -7.0406848689226695 0.013085243840406704 6.964948971386454e-08 2.134827264632513 0.32386306096472717 0.04932663535015259 954.095274730918 9.994342363579335 804.7174990697855 823.7079566267507 9.105737599727367e-08 7.0406848689226695 2.134827194983023 LTGS(ph)TSSLNK ddPTM_KYSE-520_SHP099_60min_R1 6 LTGSTSSLNK 10 0 Q9NV70-2;Q9NV70 Q9NV70-2 EXOC1 Exocyst complex component 1 1 LT(0.026)GS(0.883)T(0.025)S(0.025)S(0.041)LNK;LT(0.001)GS(0.957)T(0.011)S(0.015)S(0.015)LNK;LTGS(0.966)T(0.019)S(0.005)S(0.009)LNK;LT(0.019)GS(0.924)T(0.015)S(0.017)S(0.025)LNK;LTGS(0.922)T(0.072)S(0.005)SLNK;LTGS(0.949)T(0.05)SSLNK 261.35 9.943599999999999e-20 11182200000.0 17732100.0 17090800.0 13782300.0 12139000.0 13768800.0 15804100.0 13806100.0 15038900.0 19388700.0 15244000.0 True False 16748465.064935016 16269732.314186202 14670729.11045968 13292686.910276579 14852326.226244457 15705460.749666777 15201755.322551379 14986733.566005647 15868200.829352424 15108950.019652532 1.1085128379635865 1.076827462730621 0.9709959389221058 0.8797889259668275 0.9830151140169052 1.0394806210384142 1.0061424058440946 0.9919109896129171 1.0502517255475938 1.0 23.84890006964652 -4.666791504936906 4.7596934478681225 0.9881528348285429 1.1001382224619385 0.4703231300656422 0.04384994932121023 0.1859425968541742 7.015610548224138 0.012454825232154076 0.03501702584251191 2.1538154851854693e-05 4.666791504936906 0.1119853876333956 LTGST(ph)SSLNK ddPTM_KYSE-520_SHP099_60min_R1 4 LTGSTSSLNK 10 0 Q9NV70-2;Q9NV70 Q9NV70-2 EXOC1 Exocyst complex component 1 1 LTGS(0.019)T(0.607)S(0.259)S(0.115)LNK;LTGS(0.002)T(0.6)S(0.076)S(0.321)LNK;LTGS(0.019)T(0.734)S(0.069)S(0.178)LNK;LTGS(0.204)T(0.436)S(0.218)S(0.142)LNK 183.99 2.0790999999999998e-05 9016430000.0 13109190.0 12543480.0 10558890.0 8681330.0 9722950.0 11170730.0 10118530.0 11570600.0 13885720.0 10400540.0 True False 12381997.098177614 11940872.392652683 11239532.944221336 9506400.993062953 10488090.84898202 11101009.33049809 11141409.759736322 11530464.289198348 11364423.2785156 10308399.307097677 1.2011561377577016 1.158363392503722 1.0903276647890952 0.9221995297094747 1.0174315659037982 1.0768897284425794 1.0808089042558808 1.1185504117267981 1.102443060261627 1.0 23.297316991971062 -4.775076511275228 3.285081227249586 1.049536632470829 1.1881173421499034 0.48641633548365937 0.05459750310914226 0.2199559074888357 4.8544321456692945 0.01617201630868345 0.044663518561293934 1.678508283021681e-05 4.775076511275228 0.13858070967907432 LTGSTSS(ph)LNK ddPTM_KYSE-520_SHP099_60min_R1 5 LTGSTSSLNK 10 0 Q9NV70-2;Q9NV70 Q9NV70-2 EXOC1 Exocyst complex component 1 1 LTGS(0.001)T(0.176)S(0.235)S(0.589)LNK;LTGS(0.246)T(0.246)S(0.123)S(0.384)LNK;LTGSTS(0.057)S(0.943)LNK;LTGST(0.024)S(0.021)S(0.955)LNK;LTGS(0.001)T(0.285)S(0.117)S(0.597)LNK 224.49 1.9926e-09 11303000000.0 23169900.0 21394600.0 17430580.0 15617300.0 17295200.0 20481800.0 17907300.0 19622800.0 24349500.0 18136000.0 True False 21884619.45894943 20366771.302050676 18554183.076714084 17101563.49648755 18656233.843773086 20353965.48886206 19717544.64240621 19554733.08679595 19928244.600943666 17975329.149594497 1.2174808748602595 1.1330402426878579 1.0322026886018187 0.9513908398652796 1.0378799569405353 1.1323278321900003 1.0969225919766268 1.087865091318068 1.1086442109124452 1.0 24.099514852575137 LTIQMMS(ph)PLQIER ddPTM_KYSE-520_SHP099_60min_R1 1 LTIQMMSPLQIER 13 0 Q8WUJ0 Q8WUJ0 STYX Serine/threonine/tyrosine-interacting protein 1 LT(0.001)IQMMS(0.999)PLQIER 70.197 0.050338 0.0 155900.0 145610.0 123560.0 117890.0 119510.0 144230.0 115330.0 137430.0 147880.0 145480.0 True False 147251.91622105503 138614.67703493402 131524.87530299005 129094.23015507896 128914.75708111614 143329.80707059806 126988.6819123323 136953.28740640322 121028.71975143428 144191.16038172733 1.021227069892667 0.9613257613571435 0.9121562996982274 0.8952991973524507 0.8940545088882779 0.9940263098733033 0.8806967193838117 0.9498036290424269 0.8393629639363919 1.0 17.137623197515243 -4.4227902940815245 2.4987693151131287 0.9182835879785316 1.0274826148300145 0.30171400655367253 0.04721582050691727 0.4310840000444799 4.224427601940707 0.011670427976712684 0.0852121234754951 3.777545516182373e-05 4.4227902940815245 0.10919902685148286 LTLEDLEDSWDR ddPTM_KYSE-520_SHP099_60min_R1 3 LTLEDLEDSWDR 12 0 Q6P2Q9;I3L3Z8 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 ;; 172.27 1.4108e-05 147397000.0 251767.0 299926.0 476360.0 212606.0 303985.0 303799.0 254332.0 260066.0 380810.0 302197.0 False True 237800.9826249284 285517.10476189567 507066.92780294875 232812.01031767533 327906.8900619459 301902.8777524825 280042.3606011208 259163.89174586048 311664.503438895 299519.76968570804 0.7939408569740075 0.9532496137450104 1.6929330853019284 0.777284285982089 1.0947754480648306 1.0079564299521033 0.9349712070591358 0.8652647269921656 1.0405473527371187 1.0 18.192291705117754 LTLEGLEEDDDDRVS(ph)PTVLHK ddPTM_KYSE-520_SHP099_60min_R1 3 LTLEGLEEDDDDRVSPTVLHK 21 1 Q9NPB8 Q9NPB8 GPCPD1 Glycerophosphocholine phosphodiesterase GPCPD1 1 LTLEGLEEDDDDRVS(0.963)PT(0.037)VLHK;LTLEGLEEDDDDRVS(0.5)PT(0.5)VLHK;LTLEGLEEDDDDRVS(0.975)PT(0.025)VLHK 262.63 1.0929999999999999e-35 1008990000.0 365105.0 389075.0 349175.0 304953.0 329825.0 340305.0 342036.0 362678.0 474621.0 340773.0 True False 344851.89783122647 370383.25298651896 371683.37919975317 333935.64143253723 355780.3510524577 338181.0302652696 376612.3368296755 361419.95466768154 388441.79062175745 337754.01633738185 1.0210149432738487 1.096606509681128 1.1004558383355516 0.9886948053312549 1.0533711927708638 1.0012642749078704 1.115049173696511 1.0700685622836823 1.1500730467517037 1.0 18.36561339962233 -6.778721450254171 24.999174882845416 1.0896367349530327 1.0465159440770238 0.1323746006647144 0.0492167405986653 487.5441471597556 705245.2118714977 0.02015417336152418 0.013623864916236798 1.6644798796641582e-07 6.778721450254171 -0.04312079087600895 LTLNS(ph)PIFDKPLSR ddPTM_KYSE-520_SHP099_60min_R1 4 LTLNSPIFDKPLSR 14 1 E5RJM2;E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RIY8;H0YBX5;E5RIU4 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 LT(0.432)LNS(0.568)PIFDKPLSR;LT(0.05)LNS(0.949)PIFDKPLSR;LTLNS(1)PIFDKPLSR;LTLNS(1)PIFDKPLSR 204.63 1.0970999999999998e-11 9566890000.0 4276930.0 4331240.0 4072350.0 3358700.0 3346670.0 3698000.0 3333810.0 3538980.0 4030350.0 3307160.0 True False 4039680.1670514224 4123160.729076213 4334860.196990375 3677909.8381700194 3610033.8890524553 3674919.4102965537 3670824.049650152 3526704.1043841434 3298540.0368555165 3277861.1353315488 1.232413455075429 1.2578814534372165 1.3224660893244073 1.1220456530407614 1.101338262972909 1.1211333423143452 1.1198839420263775 1.0759162633127912 1.0063086569778912 1.0 21.644323306125152 -5.790754772191387 0.4095689362601101 1.0044006591326908 1.326019426233439 0.7865870259897206 0.04613261815921353 0.8714914743010053 0.26238739396765703 0.04859881804708807 0.12111750898867896 1.618993957315187e-06 5.790754772191387 0.3216187671007482 LTPEEEEILNK ddPTM_KYSE-520_SHP099_60min_R1 2 LTPEEEEILNK 11 0 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 0 ; 113.93 0.0020958 205646000.0 359490.0 405850.0 341000.0 299090.0 347790.0 368910.0 286330.0 345330.0 384650.0 378490.0 False True 339548.3730744517 386352.3568067302 362981.40561929066 327515.4236753122 375159.0943455895 366607.49584978406 315275.0307115071 344132.13083062775 314807.25623741694 375136.8730607643 0.9051319597139469 1.0298970443893134 0.9675972469933536 0.8730558022811625 1.0000592351390145 0.9772632928845717 0.8404266638444767 0.9173508538972269 0.8391797203748211 1.0 18.51705755019923 -6.741626774284244 24.997948665012213 0.8923518619879496 0.9604374216601171 0.19132585584110007 0.05929563742296882 348.0727540606445 439169.92769948504 0.021851257915085416 0.016902802530205787 1.8128973983243056e-07 6.741626774284244 0.06808555967216756 LTPEELER ddPTM_KYSE-520_SHP099_60min_R1 1 LTPEELER 8 0 Q5H8X8;O95399;O95399-2 Q5H8X8 UTS2 Urotensin-2 0 91.853 0.049629 0.0 266540.0 333230.0 243690.0 295630.0 302890.0 286530.0 266710.0 335620.0 315780.0 297770.0 False True 251754.49486568314 317221.130611573 259398.64731778618 323726.58631559956 326725.71979164326 284741.6599870935 293671.6496387599 334455.81255429675 258442.31216599944 295131.98946155416 0.8530234059852002 1.0748449573030656 0.8789241985968355 1.0968874872094145 1.107049494660777 0.9647942959574899 0.9950519094000669 1.1332414800729866 0.8756838343329293 1.0 18.171000777911885 -4.248037437546336 23.672046769175598 1.0173556806939201 0.8530231757499428 0.2392360926559287 0.0859653384482452 1516.0659519916783 2677752.1934409337 0.02043182119017243 0.36407586488820814 5.6488827757232575e-05 4.248037437546336 -0.16433250494397733 LTPIHDR ddPTM_KYSE-520_SHP099_60min_R1 4 LTPIHDR 7 0 I3L3X7;A0A087X2I4;P28072 I3L3X7 PSMB6 Proteasome subunit beta type;Proteasome subunit beta type-6 0 ;;; 130.27 0.0034685000000000002 2350760000.0 3803100.0 3580260.0 2637110.0 2574370.0 3570940.0 3501520.0 2630960.0 3247880.0 2973530.0 3076850.0 False True 3592134.461708108 3408258.93552018 2807102.3301251875 2819037.3507874333 3851952.662130714 3479665.714857102 2896923.1124951886 3236613.862340889 2433611.9085913086 3049591.502753074 1.1779067650422175 1.1176116317360252 0.920484703472916 0.9243983491698795 1.2631044710917163 1.1410268266145713 0.9499380851107235 1.0613270201661362 0.7980124244162936 1.0 21.540184573828594 -7.275315277509736 1.7715976507277598 0.9212310295065634 1.079239020920165 0.2253333792689629 0.11847183523134378 0.632125684327278 3.629839116365678 0.09514904195348044 0.03716315011594271 5.3049918677630456e-08 7.275315277509736 0.15800799141360156 LTPIVHS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 3 LTPIVHSPLR 10 0 H0YJL1;A0A3B3ISJ2;Q96KQ4 H0YJL1 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 LTPIVHS(1)PLR;LTPIVHS(1)PLR;LTPIVHS(1)PLR 185.2 2.7660000000000003e-06 2671440000.0 1851860.0 1674300.0 1564410.0 1450130.0 1519570.0 1636040.0 1339500.0 1421770.0 1878280.0 1547330.0 True False 1749133.634208612 1593864.1148244634 1665254.3717445028 1587949.919202518 1639151.5138294043 1625828.8675017743 1474909.7322602035 1416838.2117136123 1537231.699585637 1533621.8600045233 1.140524714614757 1.039281035560984 1.085831139456757 1.0354246771090199 1.0688107391900177 1.0601236914404566 0.9617166856606056 0.9238510800240115 1.0023538002914898 1.0 20.548511375537394 -6.738031451567466 5.88587931231008 0.9652917617510008 1.0696289086173758 0.6687217082736054 0.034256930974259095 0.0956645339191709 10.205441677705394 0.013048722019899948 0.009667682373121734 1.8279678300826397e-07 6.738031451567466 0.10433714686637496 LTPPS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 4 LTPPSPVR 8 0 Q8TAP8 Q8TAP8 PPP1R35 Protein phosphatase 1 regulatory subunit 35 1 LTPPS(1)PVR;LTPPS(1)PVR;LTPPS(1)PVR;LT(0.001)PPS(0.999)PVR 119.21 0.00096283 5025850000.0 2669950.0 2843760.0 2273050.0 1745190.0 2099840.0 2647310.0 1978690.0 2329320.0 2926660.0 2629380.0 True False 2521842.5510866274 2707141.5010292144 2419574.4400085886 1911052.3328894915 2265085.461544732 2630787.156320217 2178715.2953534448 2321240.132587373 2395252.3190947627 2606085.7388266874 0.9676744373813319 1.0387768371151227 0.9284324011142971 0.7333037069416933 0.8691523182827129 1.0094783594896808 0.8360105973851599 0.8906998330885468 0.9190995842574058 1.0 21.313453117906086 -4.971546002750458 8.716590883740631 0.8862140647111673 0.9988792284727783 0.23884555093557913 0.07616138834743288 0.3361941162075769 91.4630494314485 0.020179210101666813 0.04178906430222642 1.0677116889240955e-05 4.971546002750458 0.11266516376161106 LTPRPS(ph)PS(ph)PMIESTPMSIAGDAT(ph)PLLDEMDR ddPTM_KYSE-520_SHP099_60min_R1 2 LTPRPSPSPMIESTPMSIAGDATPLLDEMDR 31 1 Q7KZ85;Q7KZ85-3;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 3 LT(0.001)PRPS(0.999)PS(0.981)PMIES(0.011)T(0.011)PMS(0.006)IAGDAT(0.991)PLLDEMDR;LT(0.002)PRPS(0.996)PS(0.974)PMIES(0.014)T(0.014)PMS(0.003)IAGDAT(0.997)PLLDEMDR 112.72 0.0017437999999999998 78620000.0 70836.0 67893.0 52609.0 67776.0 73476.0 61865.0 53562.0 50480.0 81327.0 59955.0 True False 66906.58587193482 64631.31837052935 56000.26031737621 74217.41066240249 79258.14317874736 61478.87758734344 58976.56967474498 50304.89666212056 66560.06688683323 59423.845344284164 1.1259215132292075 1.0876327170696314 0.9423870164060788 1.2489499835025617 1.3337767476936093 1.0345826196731804 0.992473128136562 0.8465439483202221 1.1200902011844556 1.0 15.858754345201229 -6.509594286734005 23.83490688585917 0.9822086221179789 1.1431666552342976 0.3055106525331869 0.11360207887216972 454.33078489579225 815162.1766187823 0.04377852355330693 0.03689247772403987 3.093183702382443e-07 6.509594286734005 0.16095803311631873 LTPRPS(ph)PSPMIESTPMSIAGDAT(ph)PLLDEMDR ddPTM_KYSE-520_SHP099_60min_R1 4 LTPRPSPSPMIESTPMSIAGDATPLLDEMDR 31 1 Q7KZ85;Q7KZ85-3;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 2 LT(0.006)PRPS(0.898)PS(0.088)PMIES(0.085)T(0.084)PMS(0.053)IAGDAT(0.786)PLLDEMDR;LT(0.004)PRPS(0.983)PS(0.012)PMIESTPMSIAGDAT(1)PLLDEMDR;LT(0.001)PRPS(0.997)PS(0.002)PMIESTPMSIAGDAT(1)PLLDEMDR;LT(0.001)PRPS(0.91)PS(0.053)PMIES(0.018)T(0.02)PMS(0.001)IAGDAT(0.997)PLLDEMDR 182.43 1.6975e-11 451234000.0 246601.0 245327.0 221194.0 203856.0 227924.0 228603.0 210037.0 238958.0 280211.0 240299.0 True False 232921.55094309387 233541.12267666587 235452.5191629131 223230.41294845843 245860.32208983638 227176.20388102293 231269.58972358072 238129.11047121655 229331.74594447654 238170.13780979294 0.9779628675745626 0.9805642505156381 0.9885895911558392 0.9372728882020228 1.0322886166618628 0.9538399984571114 0.9710268123885324 0.9998277393675225 0.9628904280503255 1.0 17.86163301133968 -10.610684873878812 2.8208773585905123 1.0016975589998491 0.9787117492069211 0.06533067060522224 0.02462333402812491 20438749.565586634 16462804.708723318 250146.60920001392 0.005664506914831375 2.4508409385403652e-11 10.610684873878812 -0.02298580979292808 LTPRPS(ph)PSPMIESTPMSIAGDATPLLDEMDR ddPTM_KYSE-520_SHP099_60min_R1 3 LTPRPSPSPMIESTPMSIAGDATPLLDEMDR 31 1 Q7KZ85;Q7KZ85-3;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 LT(0.036)PRPS(0.655)PS(0.275)PMIES(0.015)T(0.015)PMS(0.004)IAGDATPLLDEMDR;LT(0.023)PRPS(0.97)PS(0.006)PMIESTPMSIAGDATPLLDEMDR;LT(0.002)PRPS(0.961)PS(0.035)PMIES(0.001)T(0.001)PMSIAGDATPLLDEMDR 218.16 1.3458000000000002e-22 472379000.0 49886.0 55052.0 40639.0 38936.0 45811.0 56902.0 38647.6 48936.2 59853.0 53869.0 True False 47118.7241347245 52407.2192852633 43258.65496469903 42636.465733464756 49416.065071065364 56546.853511274814 42554.47657222798 48766.45174399496 48985.203971345705 53391.76256944785 0.8825092461301709 0.9815600153131501 0.8102121541395368 0.7985588727850399 0.9255372494359743 1.0590932156945196 0.7970232583514437 0.9133703290009083 0.9174674446761252 1.0 15.704329555602424 -5.959621366181995 24.9983180358161 0.930882711805145 0.870899265384446 0.14959712132961522 0.07804920893870806 355.6237411819269 220164.3282140713 0.025123609776096248 0.02848744537721903 1.097434562786419e-06 5.959621366181995 -0.05998344642069908 LTPRPSPS(ph)PMIESTPMSIAGDATPLLDEMDR ddPTM_KYSE-520_SHP099_60min_R1 1 LTPRPSPSPMIESTPMSIAGDATPLLDEMDR 31 1 Q7KZ85;Q7KZ85-3;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 LT(0.044)PRPS(0.165)PS(0.747)PMIES(0.021)T(0.021)PMS(0.002)IAGDATPLLDEMDR 50.645 0.05915599999999999 21014000.0 8298.6 11240.0 7595.8 10435.0 11844.0 9860.2 7803.1 9993.8 15002.0 10114.0 True False 7838.260115151031 10700.013528416037 8085.4374217097065 11426.739262602852 12776.055416858348 9798.658834344524 8591.913498917194 9959.133840370452 12278.014969644437 10024.397828572928 0.7819183006493752 1.0673971356082232 0.8065758721849079 1.1398928352616629 1.2744960480760514 0.9774810419449863 0.8571002114887472 0.9934894854216129 1.2248132186701466 1.0 13.291227955299547 -3.472142664055043 0.991436569414017 1.0468549863110974 6.197091734465034e-18 0.22549541694339215 0.14037619858170194 13.79270949783624 3.4737165184485916 0.047337767459491364 22.377136518044104 0.00033717652928076896 3.472142664055043 -1.0468549863110974 LTPRPSPSPMIESTPMSIAGDAT(ph)PLLDEMDR ddPTM_KYSE-520_SHP099_60min_R1 3 LTPRPSPSPMIESTPMSIAGDATPLLDEMDR 31 1 Q7KZ85;Q7KZ85-3;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 LTPRPSPSPMIESTPMSIAGDAT(1)PLLDEMDR;LTPRPSPSPMIESTPMSIAGDAT(1)PLLDEMDR;LTPRPSPSPMIESTPMSIAGDAT(1)PLLDEMDR 160.6 1.6585e-09 436180000.0 104749.0 147716.0 102800.0 95434.0 93163.0 122437.0 93132.0 101650.0 142846.0 114257.0 True False 98938.36415804554 140619.50163376372 109426.65248581555 104504.01866672162 100494.39807504014 121672.8252673008 102546.69144072941 101297.39987528847 116908.76725462123 113244.77187060086 0.8736682720425935 1.2417306274804685 0.9662843650817886 0.9228153930685041 0.8874087202000819 1.074423333258424 0.9055313525458322 0.894499571168159 1.0323546537601491 1.0 16.78908492187863 -4.963172337856229 24.9998953868101 0.9539252523963877 1.0692765556274892 0.12582704916045118 0.10102598770036614 263.87862931269245 179127.3299879475 0.02468465669636454 0.051385032586682707 1.0884980670103284e-05 4.963172337856229 0.11535130323110154 LTPS(ph)PDIIVLS(ph)DNEAS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 3 LT(0.018)PS(0.982)PDIIVLS(1)DNEAS(0.583)S(0.417)PR 178.56 3.522e-08 0.0 159280.0 129440.0 101230.0 104890.0 124400.0 110400.0 97897.0 124530.0 167750.0 132530.0 True False 150444.42088319204 123221.50810659902 107755.44777372688 114858.71406367162 134189.57226082237 109710.9526491993 107793.38414264812 124098.0344955204 137290.82863337244 131355.88730677983 1.145319208508951 0.9380737371810136 0.8203320763390342 0.8744085736745145 1.0215725767009172 0.8352191508019045 0.8206208823430822 0.9447466500354963 1.0451821494131561 1.0 17.00312133724527 -12.454263902102548 9.945142490243933 1.0162988057714852 0.9330939333623461 0.0 0.10414301706224485 0.0 0.0 0.0 0.02424900959514302 3.513468772422354e-13 12.454263902102548 -0.0832048724091391 LTPS(ph)PDIIVLSDNEASSPR ddPTM_KYSE-520_SHP099_60min_R1 5 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LT(0.002)PS(0.998)PDIIVLSDNEASSPR;LTPS(1)PDIIVLSDNEASSPR;LT(0.003)PS(0.997)PDIIVLSDNEASSPR;LTPS(1)PDIIVLSDNEASSPR;LTPS(1)PDIIVLSDNEASSPR 351.47 1.9596999999999996e-65 293543000.0 93853.8 110255.0 89835.0 74486.2 92236.9 118748.2 75811.4 85783.0 124088.0 117209.1 True False 88647.54262108805 104958.18430387115 95625.90784108205 81565.34605290745 99495.41927382823 118007.04843639176 83475.15615996347 85485.43879490267 101556.74720392215 116170.71856129987 0.7630799199568638 0.9034822681972807 0.8231498352196477 0.7021162222549895 0.8564586713934065 1.0158071663654462 0.7185559080097803 0.7358604634075196 0.874202625770397 1.0 16.82588695015094 LTPSPDIIVLS(ph)DNEAS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 3 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 2 LTPSPDIIVLS(1)DNEAS(0.539)S(0.461)PR;LTPSPDIIVLS(1)DNEAS(0.55)S(0.451)PR;LTPSPDIIVLS(0.999)DNEAS(0.785)S(0.215)PR 81.003 0.0049172 2101910000.0 2200520.0 2250540.0 2232870.0 2015190.0 2195990.0 2207410.0 2105870.0 2194600.0 2608620.0 2249690.0 True False 2078452.7689721328 2142420.680270591 2376804.3729183157 2206713.0517110326 2368801.9195260704 2193632.7353928364 2318751.8909106296 2186987.444823491 2134960.365958799 2229759.496832337 0.9321421309898421 0.9608303870054943 1.0659465185796382 0.9896641565361444 1.0623575873950806 0.9837979111689742 1.0399112075561143 0.980817638821761 0.9574845937383774 1.0 21.088456677927613 -4.537979640254613 24.21866313800075 1.0107754916490972 0.9393141724525516 0.3692377763845841 0.03410552040299289 134.83970835737136 216254.36438177797 0.008480430471700637 0.022458298583547327 2.8974794184864977e-05 4.537979640254613 -0.07146131919654564 LTPSPDIIVLS(ph)DNEASS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 2 LTPSPDIIVLS(1)DNEAS(0.262)S(0.738)PR;LTPSPDIIVLS(1)DNEAS(0.288)S(0.712)PR 149.33 1.6105e-06 1633710000.0 1982070.0 1950080.0 1934300.0 1803750.0 1914660.0 1813740.0 1816170.0 1826780.0 2242750.0 1875990.0 True False 1872120.6259414153 1856395.2296702433 2058988.0729894256 1975177.857682789 2065332.8490748045 1802419.7758873058 1999766.1877110929 1820443.3265536588 1835523.1351266536 1859370.1880981354 1.0068573960822302 0.9984000182174938 1.107357795757428 1.0622832775990174 1.1107701211383512 0.9693711276133337 1.0755072876351546 0.9790644908724211 0.9871746610093421 1.0 20.82638259905716 -7.273496317755996 24.205128148124142 0.987339672519752 1.047685515995922 0.27421386983913654 0.0435723818142104 690.3833461689695 1385980.6794491308 0.023983776408912996 0.01167433840224642 5.3272574111498116e-08 7.273496317755996 0.06034584347617 LTPSPDIIVLS(ph)DNEASSPR ddPTM_KYSE-520_SHP099_60min_R1 10 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR;LTPSPDIIVLS(1)DNEASSPR 329.56 1.2599e-54 6161330000.0 3286170.0 3651070.0 3079800.0 2477520.0 2568660.0 3573020.0 2552330.0 3258600.0 3905250.0 3414960.0 True False 3103879.599282514 3475667.116832197 3278328.8358542304 2712982.7559064473 2770798.928323824 3550719.45683553 2810344.4247403373 3247296.6771629555 3196155.043341149 3384706.111198677 0.9170307546090878 1.0268741221970692 0.9685711929338604 0.8015416011837014 0.8186231942431654 1.0490480828121471 0.8303067777264324 0.9594028463561172 0.9442932232037263 1.0 21.690599141581465 -9.234331698973948 12.527435887679525 1.000004739350201 0.9235718589190773 0.07430743622618607 0.08049880898452429 0.0 0.0 0.07972804131210182 0.019336890332553196 5.829996593871672e-10 9.234331698973948 -0.07643288043112362 LTPSPDIIVLSDNEAS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 3 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LTPSPDIIVLSDNEAS(0.664)S(0.336)PR;LTPSPDIIVLSDNEAS(0.5)S(0.5)PR;LTPSPDIIVLS(0.001)DNEAS(0.5)S(0.5)PR 203.56 1.9945e-13 2058920000.0 1145340.0 1354830.0 1088310.0 805290.0 899330.0 1268820.0 1036380.0 1177310.0 1424270.0 1335200.0 True False 1081805.707021316 1289741.9331587085 1158464.2039575684 881824.5194807337 970102.1545122603 1260900.82373512 1141147.4044940863 1173226.1863962186 1165658.47092491 1323371.1667698817 0.8174620500927303 0.9745882074087677 0.8753887292143273 0.6663470850986678 0.7330537183155581 0.9527945412417886 0.8623033606508355 0.8865435607607042 0.8808250475715584 1.0 20.335786321309588 -6.277393295470944 24.85079673318126 0.9060154008435228 0.8176024042715405 0.265038000498806 0.08482707324425465 1406.5241158284311 2190880.8417898444 0.03302425874715168 0.02921806876485137 5.279669103412822e-07 6.277393295470944 -0.08841299657198232 LTPSPDIIVLSDNEASS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 LTPSPDIIVLSDNEASSPR 19 0 A0A0U1RRM1;Q8WXI9;A0A0U1RRK3;A0A0U1RR34 A0A0U1RRM1 GATAD2B Transcriptional repressor p66-beta 1 LTPSPDIIVLS(0.031)DNEAS(0.257)S(0.712)PR;LTPSPDIIVLSDNEAS(0.199)S(0.801)PR;LTPSPDIIVLSDNEAS(0.179)S(0.821)PR 174.02 1.9786999999999998e-10 494660000.0 655820.0 743340.0 568800.0 467938.0 521580.0 683660.0 504954.0 662970.0 732660.0 671980.0 True False 619440.3572552415 707628.8306239122 605465.7581121778 512410.6868293104 562625.3786157536 679393.0243491994 555999.6781961318 660670.3118083619 599627.412855598 666026.7799925288 0.9300532288839648 1.062463029837704 0.9090711909796925 0.7693544797628984 0.8447488832537107 1.0200686290074108 0.8348007841401944 0.9919575783661027 0.9003052592905113 1.0 19.34522066162174 -9.141328194166643 13.265984660692387 1.00000212160304 0.9182627578210083 0.07769038344845913 0.084663403179041 0.0 0.0 0.08536500337247377 0.020704054449171602 7.2222381640441e-10 9.141328194166643 -0.08173936378203162 LTPVS(ph)LSNS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 1 LTPVSLSNSPIK 12 0 P46100-2;P46100-5;P46100-3;P46100-4;P46100 P46100-2 ATRX Transcriptional regulator ATRX 2 LTPVS(0.997)LS(0.011)NS(0.993)PIK 176.56 3.732e-07 0.0 572380.0 446090.0 391020.0 430500.0 433720.0 392780.0 425400.0 492300.0 466110.0 451860.0 True False 540628.9403887584 424659.1668052588 416225.7748541211 471414.5905654552 467851.2964707701 390328.51432565704 468403.58350391197 490592.32620368357 381476.17367690796 447856.87194176053 1.2071466896215495 0.9482028599094079 0.9293723082767551 1.0526009984429985 1.0446446750773752 0.8715474491511553 1.045877852611857 1.0954221246547722 0.8517814453152239 1.0 18.77267821758614 -4.25529336310225 24.53404151943947 0.9861817032081059 1.2071468175496392 0.4333011498206495 0.07706596726372593 521.0592784798781 2079920.184221441 0.018822012904032348 0.1679909318294812 5.555288743532534e-05 4.25529336310225 0.2209651143415332 LTPVS(ph)LSNS(ph)PIKGADCQEVPQDKDGYK ddPTM_KYSE-520_SHP099_60min_R1 1 LTPVSLSNSPIKGADCQEVPQDKDGYK 27 2 P46100-2;P46100-5;P46100-3;P46100-4;P46100 P46100-2 ATRX Transcriptional regulator ATRX 2 LTPVS(0.95)LS(0.292)NS(0.758)PIKGADCQEVPQDKDGYK 145.79 8.7632e-07 1021400000.0 993650.0 924930.0 934320.0 760010.0 683080.0 607900.0 619990.0 848920.0 949320.0 722990.0 True False 938530.2537078342 880494.9744517658 994547.7621648551 832241.1218946618 736834.5098064515 604105.8706109443 682664.6397193001 845975.2946594178 776947.4184097355 716584.871077709 1.309726581718548 1.228737878777072 1.387899469143276 1.1613992361337624 1.028258535096182 0.8430346425014504 0.9526640420032947 1.1805653856285185 1.0842364244185678 1.0 19.450778059359216 -5.571403838947556 3.2691547885510617 1.0123315571163238 1.2999926090313951 0.6848821341520825 0.08941639234880469 0.15673376667797492 3.436619128049536 0.030255373428129877 0.04185234155765883 2.6828485755127036e-06 5.571403838947556 0.2876610519150713 LTPVS(ph)PES(ph)SSTEEK ddPTM_KYSE-520_SHP099_60min_R1 1 LTPVSPESSSTEEK 14 0 E7EMC7;Q13501;Q13501-2 E7EMC7 SQSTM1 Sequestosome-1 2 LTPVS(0.995)PES(0.87)S(0.111)S(0.02)T(0.004)EEK 112.96 0.0010102 174530000.0 706900.0 649750.0 726230.0 658050.0 618900.0 726200.0 651410.0 689860.0 806670.0 716480.0 True False 667686.8478297867 618535.0347053672 773043.947809084 720590.8741500523 667603.9089406978 721667.5164297879 717260.8799489504 687467.0366745342 660199.0624958719 710132.5446130043 0.9402284867730588 0.8710135021940807 1.0885910717278335 1.014727292272948 0.9401116932396288 1.0162434068179056 1.010038034997862 0.968082707784049 0.9296842786661126 1.0 19.43772879991222 -4.733555723276446 24.99999784075664 0.9947014359776473 0.9056209697957236 0.39162149600465124 0.045005402642167194 224.54789108329763 201322.48181936727 0.011637924282991744 0.030776764779616002 1.8469038079377425e-05 4.733555723276446 -0.08908046618192367 LTPVS(ph)PESS(ph)STEEK ddPTM_KYSE-520_SHP099_60min_R1 1 LTPVSPESSSTEEK 14 0 E7EMC7;Q13501;Q13501-2 E7EMC7 SQSTM1 Sequestosome-1 2 LTPVS(1)PES(0.008)S(0.818)S(0.147)T(0.027)EEK 141.82 0.00011209 166230000.0 425890.0 390830.0 430520.0 403060.0 413520.0 405190.0 389190.0 451010.0 507960.0 430740.0 True False 402265.0327093338 372053.9401522102 458272.00805635506 441366.70121559215 446061.67139304866 402661.05891240115 428533.1233283669 449445.5515765257 415727.2686295556 426923.9787106496 0.9422404286688508 0.871475856839543 1.0734276613845384 1.0338297290036529 1.044826933217002 0.9431680556535504 1.0037691596114537 1.0527531223097222 0.973773527280175 1.0 18.70361967004044 -4.754423012327297 24.999694507776454 1.01624970024469 0.9068581256591499 0.5453776609804739 0.03974460642961864 118.13174886357538 420899.2889614856 0.010236676041697633 0.02588252026727469 1.760260678730618e-05 4.754423012327297 -0.10939157458554005 LTPVS(ph)PESSSTEEK ddPTM_KYSE-520_SHP099_60min_R1 10 LTPVSPESSSTEEK 14 0 E7EMC7;Q13501;Q13501-2 E7EMC7 SQSTM1 Sequestosome-1 1 LTPVS(0.999)PES(0.001)SSTEEK;LTPVS(0.703)PES(0.285)S(0.011)STEEK;LTPVS(1)PESSSTEEK;LTPVS(0.999)PESSSTEEK;LTPVS(1)PESSSTEEK;LTPVS(0.793)PES(0.164)S(0.034)S(0.007)T(0.002)EEK;LTPVS(0.971)PES(0.014)S(0.014)STEEK;LTPVS(0.998)PES(0.002)SSTEEK;LTPVS(0.991)PES(0.002)S(0.001)S(0.005)T(0.001)EEK;LTPVS(0.98)PES(0.014)S(0.004)S(0.001)TEEK 355.75 4.833699999999999e-67 50702170000.0 19398680.0 23172000.0 16765170.0 14356070.0 14872660.0 21044220.0 16797290.0 20613300.0 22444100.0 21132900.0 True False 18322596.550090153 22058782.338118903 17845879.68342044 15720466.576490153 16043053.728140185 20912875.217022933 18495323.99895259 20541797.273480408 18368817.209718462 20945678.947147407 0.8747673730855837 1.0531423876867496 0.852007697074478 0.7505350681712384 0.7659361994720677 0.9984338664692012 0.8830138209232635 0.9807176613999422 0.8769740649643688 1.0 24.320149313649065 -6.2819173898534775 24.99448798391018 0.9425718520832105 0.8636028367721157 0.20695122277899014 0.08615760322657769 1687.4413523258916 2059604.5425419135 0.03310188510121247 0.0292283871008357 5.224955670299287e-07 6.2819173898534775 -0.07896901531109479 LTPVSLSNS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 4 LTPVSLSNSPIK 12 0 P46100-2;P46100-5;P46100-3;P46100-4;P46100 P46100-2 ATRX Transcriptional regulator ATRX 1 LTPVSLS(0.001)NS(0.998)PIK;LTPVSLS(0.003)NS(0.997)PIK;LTPVS(0.001)LS(0.008)NS(0.991)PIK;LTPVSLS(0.001)NS(0.999)PIK 172.58 1.632e-07 5335220000.0 4894550.0 5288080.0 3637620.0 3730120.0 3706060.0 5605800.0 4517040.0 5577860.0 5324930.0 5676230.0 True False 4623039.554456477 5034032.699230101 3872106.805597789 4084629.483298532 3997705.837403082 5570812.122834071 4973666.485262124 5558511.705542307 4358056.942561579 5625943.018240115 0.8217359364408632 0.8947891372004737 0.688259158161372 0.7260346345591445 0.710584132196495 0.9902005947754355 0.8840591646834643 0.988014220464163 0.7746358127752331 1.0 22.423663509868945 -6.259572322397706 24.999945625229632 0.9239251736314403 0.7685162168364726 0.4798128465676289 0.08279072136254648 159.193503539061 2131615.406467444 0.028401842438805416 0.027028201196603395 5.500823085150459e-07 6.259572322397706 -0.1554089567949677 LTPVSLSNS(ph)PIKGADCQEVPQDK ddPTM_KYSE-520_SHP099_60min_R1 2 LTPVSLSNSPIKGADCQEVPQDK 23 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100 P46100-2 ATRX Transcriptional regulator ATRX 1 LTPVSLS(0.034)NS(0.966)PIKGADCQEVPQDK;LTPVSLS(0.004)NS(0.996)PIKGADCQEVPQDK 284.86 2.523e-48 6647800000.0 3477900.0 3809800.0 2517200.0 2687900.0 2912100.0 3997300.0 3078300.0 3599500.0 4014700.0 3791300.0 True False 3284973.9539782316 3626771.4893736145 2679462.7396624 2943357.2078533974 3141265.7024175264 3972351.3679768513 3389484.6053128666 3587014.1746296175 3285731.682351122 3757712.031586768 0.8741952353893085 0.965154183952233 0.7130569658183583 0.7832843983551626 0.8359516844325787 1.05711968734854 0.9020075452353357 0.9545739919604563 0.8743968815949041 1.0 21.84142308086125 -6.131944717739862 10.978101230893007 0.951262607962466 0.8315634229293085 0.3945799450469204 0.07613566832797017 0.5345011658876406 44.587006271738304 0.02604219284512823 0.0260486416801197 7.379981654926189e-07 6.131944717739862 -0.11969918503315746 LTPYEVDELRR ddPTM_KYSE-520_SHP099_60min_R1 3 LTPYEVDELRR 11 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 ;; 176.8 1.6655e-05 1766450000.0 1262950.0 1087940.0 735470.0 680580.0 1173000.0 1027930.0 779440.0 791810.0 884390.0 847390.0 False True 1192891.6458715925 1035673.729368768 782879.5729936071 745262.1185761616 1265308.4265429613 1021514.3075787276 858233.4018013377 789063.3959198437 723807.0696576348 839882.7838594444 1.4203072962038767 1.2331169887893423 0.9321295638375928 0.8873406300240132 1.5065297811304017 1.216258181748466 1.021849022619047 0.9394922852138073 0.8617953404540376 1.0 19.679828470251245 -6.934803039900823 3.5668401937807355 0.9314792964477788 1.1878005662003113 0.31139206398187136 0.18010817235689672 0.33326828563062505 8.556254789164404 0.09022372813506004 0.05674652079610071 1.1619754704425983e-07 6.934803039900823 0.25632126975253244 LTQAEISEQPTMATVVPQVPT(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 LTQAEISEQPTMATVVPQVPTSPK 24 0 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 LTQAEISEQPTMATVVPQVPT(0.598)S(0.402)PK 102.16 0.0023403 218940000.0 231910.0 317360.0 193490.0 200730.0 238020.0 366690.0 258040.0 340470.0 376010.0 422320.0 True False 219045.4899988766 302113.5492329286 205962.67499494582 219807.3188483248 256750.81985145423 364401.3516932505 284125.20142771397 339288.9890362951 307736.0624407412 418578.5733599878 0.5233079377201951 0.7217606644502168 0.4920525992089253 0.5251279755767267 0.6133873929343303 0.8705685739433595 0.6787858230463205 0.8105741923500185 0.7351930605776151 1.0 18.675138937730253 -6.14461661675506 5.160147009575769 0.7977255526840694 0.5715178792092442 0.600538439437063 0.09911811449051182 0.1726551954909951 6.648372116440773 0.031853503641420436 0.031930961492642684 7.167758810763906e-07 6.14461661675506 -0.22620767347482518 LTQLGTFEDHFLSLQR ddPTM_KYSE-520_SHP099_60min_R1 2 LTQLGTFEDHFLSLQR 16 0 P00533;E9PFD7;Q504U8;P00533-3;P00533-4;P00533-2 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 0 ; 214.5 1.2725e-17 255900000.0 121503.0 160176.0 98745.0 189033.0 177910.0 158546.0 110175.0 119453.0 142995.0 89008.0 False True 114762.98637977445 152480.9045309223 105110.26069758623 206998.6394851561 191910.50483057002 157556.45560434743 121312.56420438048 119038.64542353983 117030.71261060568 88219.45836717622 1.3008806504129962 1.7284271220107128 1.1914634553763546 2.346405694576039 2.1753761401688005 1.7859603597721634 1.375122523417319 1.3493468178878605 1.3265861611110192 1.0 16.428809282425878 -6.839897974500035 3.906589070798417 1.272270611283549 1.7749877561923735 0.3402107588499691 0.3374707398476917 0.29961026508525895 8.830893725770167 0.1588917056764982 0.10576681466433406 1.4457793768081416e-07 6.839897974500035 0.5027171449088246 LTQT(ph)SSTEQLNVLETETEVLNK ddPTM_KYSE-520_SHP099_60min_R1 1 LTQTSSTEQLNVLETETEVLNK 22 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 LT(0.105)QT(0.349)S(0.175)S(0.089)T(0.282)EQLNVLETETEVLNK 194.77 9.3388e-15 60295000.0 77749.0 95002.0 67492.0 65654.0 56140.0 82483.0 79322.0 79345.0 103490.0 100770.0 True False 73436.10798121095 90437.96131909077 71842.64231101806 71893.73642040513 60557.898607094554 81968.19300148473 87340.6418681178 79069.77071426218 84698.82477059745 99877.25619787369 0.7352635702739133 0.9054910473303143 0.7193093307317701 0.7198208997448979 0.606323210232359 0.8206892752349135 0.8744797884223137 0.7916694323041036 0.8480291509289641 1.0 16.60786856801528 -8.195216722246773 0.6252562637337176 1.0010304266746124 0.7534264478065142 0.4665759269909129 0.07800718265259701 1.038869673530243 0.8857568938636866 0.09047857147285089 0.035923089330985224 6.379450585004195e-09 8.195216722246773 -0.24760397886809815 LTQTS(ph)STEQLNVLETETEVLNK ddPTM_KYSE-520_SHP099_60min_R1 1 LTQTSSTEQLNVLETETEVLNK 22 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 LT(0.009)QT(0.046)S(0.315)S(0.315)T(0.315)EQLNVLETETEVLNK 208.44 1.837e-19 112870000.0 91935.0 103150.0 76839.0 63242.0 74270.0 111040.0 62747.0 90471.0 114710.0 112410.0 True False 86835.18228212123 98194.51916869347 81792.1648867469 69252.50066559925 80114.62646150547 110346.95817180343 69090.07911170654 90157.1772170901 93881.5556037803 111414.13485365671 0.7793910745362774 0.881347050781956 0.7341273617946369 0.621577331786159 0.7190705790314363 0.9904215323912444 0.6201195135828759 0.8092077126076705 0.8426359521356461 1.0 16.765572750109897 -8.115047279647902 1.9562197231330494 0.9991231432726774 0.7669118572753284 0.3107646567562391 0.10510665674173204 0.6228868227696858 4.986698337010002 0.1021871411662561 0.02856479230204031 7.672779547838687e-09 8.115047279647902 -0.23221128599734897 LTQTSS(ph)TEQLNVLETETEVLNK ddPTM_KYSE-520_SHP099_60min_R1 5 LTQTSSTEQLNVLETETEVLNK 22 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 LT(0.105)QT(0.07)S(0.047)S(0.389)T(0.389)EQLNVLETETEVLNK;LT(0.226)QT(0.124)S(0.065)S(0.292)T(0.292)EQLNVLETETEVLNK;LT(0.056)QT(0.025)S(0.025)S(0.446)T(0.446)EQLNVLETETEVLNK;LT(0.036)QT(0.018)S(0.159)S(0.394)T(0.394)EQLNVLETETEVLNK;LT(0.003)QT(0.03)S(0.113)S(0.427)T(0.427)EQLNVLETETEVLNK 266.45 3.2195999999999994e-36 2052790000.0 535850.0 741968.0 508895.0 496521.0 458706.0 640997.0 481286.0 614157.0 753656.0 666326.0 True False 506125.3323095074 706322.7435633262 541699.1859607892 543710.2065555175 494803.55251987727 636996.2999572356 529939.0857787108 612026.6327123218 616811.0685216868 660422.8700337835 0.7663655443725275 1.0695007329579527 0.8202308105003677 0.8232758604009343 0.7492223164448649 0.9645279242444321 0.8024238860044355 0.9267193195187411 0.9339638230428547 1.0 19.33303055518621 -7.813387316134983 1.5082860105684646 0.9962432900271605 0.8617595148358089 0.2001797996987834 0.09166640424792258 0.6297365754889478 2.97783672047795 0.08491090403027932 0.025708706513898734 1.536783481884627e-08 7.813387316134983 -0.13448377519135157 LTQTSST(ph)EQLNVLETETEVLNK ddPTM_KYSE-520_SHP099_60min_R1 2 LTQTSSTEQLNVLETETEVLNK 22 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 LT(0.037)QT(0.019)S(0.074)S(0.293)T(0.577)EQLNVLETETEVLNK;LTQT(0.006)S(0.006)S(0.308)T(0.68)EQLNVLETETEVLNK 323.36 1.8234999999999998e-54 298240000.0 217456.0 364718.0 246322.0 180402.0 208847.0 330040.0 220319.0 245593.0 321549.0 297974.0 True False 205393.28219221107 347196.39982712147 262200.31024913484 197547.35184016093 225282.07072311876 327980.0979378783 242590.99462623041 244741.09520483736 263163.80719065457 295334.1821802642 0.695460581893783 1.1756051983688158 0.8878088825122676 0.6688943026567213 0.7628039160926265 1.1105389004300485 0.8214118421218146 0.8286920714631463 0.8910712781293508 1.0 18.171988819083413 -8.042513431125913 19.54823029359715 1.0000000092020553 0.8750148060415976 0.05932429090134228 0.15437798101104702 1536.6272965255944 706566.1054990215 0.15024234517485574 0.03879238300930165 9.06747921782675e-09 8.042513431125913 -0.12498520316045769 LTQYHGGS(ph)LPNVSQLR ddPTM_KYSE-520_SHP099_60min_R1 8 LTQYHGGSLPNVSQLR 16 0 Q6UUV7;Q6UUV7-3;H0YK33 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 LTQYHGGS(1)LPNVSQLR;LTQYHGGS(1)LPNVSQLR;LTQYHGGS(1)LPNVSQLR;LTQYHGGS(1)LPNVSQLR;LTQYHGGS(1)LPNVSQLR;LTQYHGGS(1)LPNVSQLR;LTQYHGGS(1)LPNVSQLR;LTQYHGGS(1)LPNVSQLR 232.49 4.2286e-23 3850320000.0 2335710.0 2537360.0 2558840.0 2891530.0 2444370.0 2397640.0 2235190.0 2249140.0 3052130.0 2368510.0 True False 2206143.5101775527 2415461.4169449946 2723786.920688757 3166340.141829807 2636728.0124371867 2382675.4394006007 2461144.818552205 2241338.258293225 2497940.129936069 2347526.844072899 0.9397734964129102 1.0289387842544246 1.1602793499745703 1.348798268196281 1.1231939771400148 1.0149726063480151 1.0483990096923372 0.9547657629356692 1.0640730845071857 1.0 21.16271022457891 -6.252867656791149 7.1328817429890305 1.0154538841758542 1.1302717484226097 0.20474309548841207 0.10129908470802669 0.24914764290680064 84.00142779116176 0.03805415942541723 0.03632575740529176 5.586404041296646e-07 6.252867656791149 0.11481786424675544 LTRPAAS(ph)PAVGEK ddPTM_KYSE-520_SHP099_60min_R1 8 LTRPAASPAVGEK 13 1 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-4;Q8N2M8-3 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 1 LTRPAAS(1)PAVGEK;LTRPAAS(1)PAVGEK;LT(0.003)RPAAS(0.997)PAVGEK;LTRPAAS(1)PAVGEK;LT(0.001)RPAAS(0.999)PAVGEK;LTRPAAS(1)PAVGEK;LTRPAAS(1)PAVGEK;LTRPAAS(1)PAVGEK 138.05 8.7789e-06 24331970000.0 22638980.0 19363840.0 18159010.0 15451480.0 17013930.0 18520680.0 16152990.0 17619760.0 21498080.0 17484690.0 True False 21383150.649712224 18433572.06068359 19329568.840043277 16919984.013543136 18352829.4949805 18405085.566222593 17785891.867190532 17558641.16504292 17594570.594494972 17329789.24948297 1.2338955968752006 1.0636928006053825 1.1153954939538557 0.9763525551268859 1.0590336230158166 1.0620490129025488 1.0263189939093558 1.0132056952491084 1.0152789708634167 1.0 24.046750773956326 -1.0000000000000249 0.7948404924108613 1.0258569725341413 50.009696263487974 0.763348908917509 0.034096909634321784 228.53269621024825 0.8087665475635959 0.011769372244294538 20147.03678041986 0.09999999999999427 1.0000000000000249 48.98383929095383 LTS(ph)DEEGEPSGK ddPTM_KYSE-520_SHP099_60min_R1 2 LTSDEEGEPSGK 12 0 Q8WVC0-2;Q8WVC0 Q8WVC0-2 LEO1 RNA polymerase-associated protein LEO1 1 LT(0.159)S(0.841)DEEGEPSGK;LT(0.001)S(0.999)DEEGEPSGK 165.51 2.848e-06 237980000.0 1366120.0 1233240.0 1160950.0 1182360.0 1294350.0 1253300.0 1286350.0 1370900.0 1521520.0 1249320.0 True False 1290338.6003072967 1173993.2992690196 1235786.694585678 1294731.1389105038 1396207.9811559115 1245477.6898119694 1416386.8115661896 1366144.667870466 1245250.3223979056 1238251.9967562535 1.0420646231037707 0.9481053148667904 0.9980090464808183 1.0456119936024364 1.1275636823630748 1.005835397862991 1.143859905153863 1.1032848494888297 1.005651778200225 1.0 20.239873516731407 -5.344915311969366 3.696092913313963 1.0715001195875398 0.9906566635783632 0.24114386951782552 0.052708337836441514 0.280717340988609 7.2637032732829505 0.014741149254061633 0.023156420172656875 4.5194406550686224e-06 5.344915311969366 -0.08084345600917653 LTS(ph)HQMLSSTEILK ddPTM_KYSE-520_SHP099_60min_R1 1 LTSHQMLSSTEILK 14 0 H0Y465;P21359-2;P21359-6;P21359;P21359-4;J3KSB5 H0Y465;J3KSB5 NF1 Neurofibromin;Neurofibromin truncated 1 LT(0.1)S(0.636)HQMLS(0.088)S(0.088)T(0.088)EILK 53.169 0.046917 508070000.0 578580.0 591920.0 471030.0 389170.0 450220.0 470040.0 413010.0 377220.0 573350.0 461100.0 True False 546485.0140293642 563483.2747099664 501393.34747464693 426156.59979177325 485649.7525986129 467106.3060075154 454761.081389164 375911.5118638094 469244.0929773126 457015.01273037127 1.1957703769170889 1.2329644738441208 1.0971047635375117 0.9324783386124696 1.0626560158213785 1.0220808791747455 0.9950681459505204 0.8225364624631902 1.026758596339933 1.0 18.801882032358915 -4.994030063932423 3.3420353830907708 0.979028347289013 1.2130408351768425 0.6893932676030747 0.0631090009317785 0.13376622585804765 3.138026164780502 0.018087688184253558 0.03920130990579133 1.0138412003909791e-05 4.994030063932423 0.23401248788782947 LTS(ph)PGALLFQ ddPTM_KYSE-520_SHP099_60min_R1 2 LTSPGALLFQ 10 0 O60566-3;O60566;O60566-2 O60566-3 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 LT(0.08)S(0.92)PGALLFQ;LT(0.011)S(0.989)PGALLFQ 90.65700000000001 0.0035762 39094000.0 80491.0 124188.0 83957.0 51815.0 71466.0 113853.0 72567.0 92773.0 117561.0 109454.0 True False 76026.00377516946 118221.82207001158 89369.00255594956 56739.48202125222 77089.967614083 113142.40119537406 79902.78054567092 92451.19211638102 96214.88587164164 108484.32271392338 0.7008017552513321 1.0897595072955037 0.823796474183818 0.5230201065169208 0.7106092906840715 1.0429378030384555 0.7365375802398388 0.8522078564308113 0.8869012910313628 1.0 16.72712704542867 -6.2158688705107545 24.99955791904878 0.8840316437748165 0.7766965409557599 0.15335601026272905 0.15368196802848152 1140.4292327682147 625628.6248052396 0.05404905547966767 0.05404889385121937 6.083186473427015e-07 6.2158688705107545 -0.10733510281905656 LTS(ph)SCPDLPSQTDKK ddPTM_KYSE-520_SHP099_60min_R1 2 LTSSCPDLPSQTDKK 15 1 P56962 P56962 STX17 Syntaxin-17 1 LT(0.078)S(0.461)S(0.461)CPDLPSQTDKK;LT(0.018)S(0.579)S(0.404)CPDLPSQTDKK 168.08 2.4061e-08 3714260000.0 2500440.0 2046620.0 1930490.0 1980700.0 2066160.0 1931860.0 1936450.0 1725890.0 2429140.0 2032800.0 True False 2361735.6086964393 1948297.3031607515 2054932.4742932094 2168945.1324808286 2228755.0371577223 1919802.5451529184 2132205.2639307696 1719903.2904157548 1988069.4096361867 2014790.973494469 1.1721988234840197 0.9669972363344519 1.019923407106157 1.0765112416197664 1.1061966558705354 0.952854450118564 1.05827616461506 0.8536385724583336 0.9867373021768426 1.0 20.942198742000343 -6.706651007393464 1.582563693089197 0.9493048152442711 1.0574890012318425 0.2800572359845107 0.0718714544852051 0.4945856031901087 2.530636992795479 0.03828282340258292 0.024257733087559213 1.9649386381334366e-07 6.706651007393464 0.1081841859875714 LTSCTPGLEDEKEAS(ph)ENETDMEDPR ddPTM_KYSE-520_SHP099_60min_R1 1 LTSCTPGLEDEKEASENETDMEDPR 25 1 A0A0C4DGK3;Q8WXH0-7;Q8WXH0;Q8WXH0-2;Q8WXH0-10;Q8WXH0-4;Q8WXH0-3;Q8WXH0-13 A0A0C4DGK3 SYNE2 Nesprin-2 1 LTSCTPGLEDEKEAS(0.5)ENET(0.5)DMEDPR 53.25899999999999 0.045467 285590000.0 115400.0 138850.0 110270.0 144520.0 127440.0 123390.0 157770.0 147140.0 185830.0 129030.0 True False 108998.53195580334 132179.4375819009 117378.18063823806 158255.13734847747 137468.8029655882 122619.8772408036 173718.93128681768 146629.60568273417 152087.95639308266 127886.8945838209 0.8523041575957764 1.0335651515509006 0.9178280622124645 1.2374617263440728 1.074924865545836 0.9588150344868595 1.3583794637609024 1.1465569334520727 1.1892380129177322 1.0 16.96450890372543 -4.222754770315379 0.639045674557892 1.1543048230272814 0.6750231894104696 0.3400981954514427 0.12048159840577113 3.954595608824686 1.1870295843887333 0.05647198395154878 1.4104256740343573 5.9874959089552544e-05 4.222754770315379 -0.47928163361681186 LTSGKLS(ph)GINEIPRPFS(ph)PPVT(ph)SNTSPPPAAPLAR ddPTM_KYSE-520_SHP099_60min_R1 1 LTSGKLSGINEIPRPFSPPVTSNTSPPPAAPLAR 34 2 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 3 LT(0.264)S(0.288)GKLS(0.449)GINEIPRPFS(0.996)PPVT(0.617)S(0.162)NT(0.116)S(0.107)PPPAAPLAR 73.168 0.035598000000000005 133350000.0 61563.0 56013.0 69682.0 44295.0 71252.0 76526.0 66525.0 60829.0 90705.0 68897.0 True False 58147.97766720208 53322.05140277291 74173.8132151421 48504.783482222636 76859.12703157638 76048.3728481217 73249.99622143332 60617.99839659534 74235.25848697498 68286.62618105485 0.8515280505003835 0.7808564338995906 1.086212884767187 0.7103116114364367 1.125537038948043 1.1136642282851608 1.0726843646839224 0.887699419149411 1.0871126989075133 1.0 16.05931543637333 -5.777945504894132 24.9999963490978 1.0467070630050392 0.8681282553382469 0.41767545687150265 0.109922191721093 253.73706698880147 384305.8091112175 0.033785526621063815 0.03841618539109821 1.6674564312211594e-06 5.777945504894132 -0.17857880766679235 LTSPVTSIS(ph)PIQASEK ddPTM_KYSE-520_SHP099_60min_R1 1 LTSPVTSISPIQASEK 16 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-6;Q7Z589-4 Q7Z589 EMSY;C11orf30 Protein EMSY 1 LTSPVTSIS(1)PIQASEK 175.48 2.2588e-08 561060000.0 338790.0 376300.0 324520.0 264360.0 241630.0 306890.0 239470.0 323370.0 378530.0 375340.0 True False 319996.64333887905 358221.9831621845 345439.0784503585 289484.6949172676 260644.90631336422 304974.5856749343 263677.96460197854 322248.3049451253 309798.4939647716 372014.7796101009 0.8601718557371814 0.9629240632257344 0.9285627813292909 0.7781537476029018 0.7006305141600542 0.8197915846100801 0.708783572734214 0.8662244690462714 0.8327585648329978 1.0 18.50500041309979 -5.256882402902109 24.794055960942327 0.8006023945793871 0.9217900259837167 0.2250426209561599 0.08362511638137908 422.2327581484022 2297316.552489001 0.02209301369802557 0.03663972785459864 5.534999641656135e-06 5.256882402902109 0.12118763140432964 LTSS(ph)CPDLPSQTDKK ddPTM_KYSE-520_SHP099_60min_R1 2 LTSSCPDLPSQTDKK 15 1 P56962 P56962 STX17 Syntaxin-17 1 LTS(0.021)S(0.978)CPDLPSQTDKK;LTS(0.012)S(0.988)CPDLPSQTDKK 188.96 3.2556999999999995e-11 4401600000.0 3609300.0 2724620.0 2735000.0 2723300.0 2852900.0 2934100.0 2493750.0 2708100.0 3462200.0 2436950.0 True False 3409084.934038832 2593725.1654620045 2911302.4761547204 2982121.613209999 3077406.9992194483 2915787.193550865 2745842.5866546305 2698706.2331752935 2833551.754959539 2415360.518918409 1.4114186711826398 1.0738459725355893 1.2053283364333507 1.234648653835488 1.2740984110303755 1.20718508508889 1.1368251510065297 1.1173099055141325 1.173138226267106 1.0 21.20380711243785 -13.999999999999998 0.09652756870559036 0.3202696169142318 1.3511054626010024 0.451559951550632 0.07982058588183974 190.98462144751036 1.2615319722498215 25.925959659827946 1.5071356282826005 1.0000000000000041e-14 13.999999999999998 1.0308358456867706 LTSS(ph)LEAGLQR ddPTM_KYSE-520_SHP099_60min_R1 2 LTSSLEAGLQR 11 0 B7Z879;A0A087WXL6;Q9H270 B7Z879 VPS11 Vacuolar protein sorting-associated protein 11 homolog 1 LTS(0.253)S(0.747)LEAGLQR;LTS(0.003)S(0.997)LEAGLQR 246.49 1.9562e-14 404860000.0 768530.0 722840.0 581230.0 465480.0 537280.0 640260.0 533270.0 681910.0 816520.0 643480.0 True False 725898.108873427 688113.6813950407 618697.0158008817 509719.07924833545 579560.8792949729 636263.899847612 587178.1358136609 679544.6133689911 668260.5507941651 637779.2678198641 1.1381651074278123 1.078921370001938 0.9700801625549671 0.7992092326718618 0.9087170256820977 0.9976239930510252 0.9206604313445713 1.0654855804452448 1.0477928407401764 1.0 19.28269767535153 -9.938112678333056 13.966822964954318 0.9999966216303531 0.9859019125738592 0.0 0.09351823162932475 0.0 0.0 0.09945955575439143 0.024122485520727342 1.1531540315198734e-10 9.938112678333056 -0.014094709056493904 LTSVVTPRPFGS(ph)QTR ddPTM_KYSE-520_SHP099_60min_R1 1 LTSVVTPRPFGSQTR 15 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 LTSVVTPRPFGS(0.996)QT(0.004)R 98.165 0.00094334 317860000.0 140340.0 139280.0 99436.0 110500.0 104990.0 133880.0 75735.0 137870.0 151070.0 105040.0 True False 132555.06043914607 132588.7797364579 105845.80366322518 121001.88677696358 113252.11568861513 133044.40525973542 83391.0329023714 137391.76114909982 123639.49616479031 104109.42731988333 1.2732282162292718 1.2735520994565632 1.016678377626713 1.1622567705149027 1.0878180641666606 1.277928509307302 0.8009940602799279 1.3196860715308159 1.1875917421474187 1.0 16.66774118795251 -4.735716243443897 24.218952008403566 1.1145551653976218 1.2733905308556186 0.18171716125911197 0.14075424637427963 273.1351917030801 257157.17754006226 0.03436933902725163 0.09085066775921803 1.837738681138706e-05 4.735716243443897 0.1588353654579968 LTTPTYGDLNHLVSATMSGVTTCLR ddPTM_KYSE-520_SHP099_60min_R1 1 LTTPTYGDLNHLVSATMSGVTTCLR 25 0 P04350;M0R2D3;Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371 P04350;Q5JP53;P68371 TUBB4A;TUBB;TUBB2B;TUBB2A;TUBB4B Tubulin beta-4A chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain 0 66.31 0.042689 18721000.0 20974.0 29678.0 14791.0 23706.0 19714.0 24622.0 19041.0 22531.0 26811.0 22447.0 False True 19810.530409367577 28252.224332413807 15744.451526436751 25959.0111125312 21265.379642683674 24468.324964932846 20965.850102251967 22452.84521977494 21942.79825030908 22248.13704350175 0.890435471996243 1.2698692154391298 0.7076750514279757 1.1667948224956357 0.9558274295552706 1.0997920822354683 0.9423643004921028 1.0092011378693382 0.9862757590626289 1.0 14.441396916049825 LTTTGQVT(ph)SPVK ddPTM_KYSE-520_SHP099_60min_R1 1 LTTTGQVTSPVK 12 0 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTTT(0.001)GQVT(0.5)S(0.5)PVK 164.22 5.9951e-05 434750000.0 1066000.0 1203600.0 910420.0 797020.0 842310.0 1132500.0 897690.0 1153000.0 1168900.0 1144400.0 True False 1006866.8549816832 1145777.249359569 969107.1299235034 872768.5411671989 908595.0049116812 1125431.6474204555 988437.2658101242 1149000.512112224 956657.2255710817 1134261.5063297285 0.8876849380525377 1.010152634966079 0.8543947974214202 0.769459720088117 0.8010454377947951 0.9922153234858115 0.8714368426453385 1.0129943630284945 0.8434185769617245 1.0 20.113321864270173 -6.268058679351299 24.966001795269737 0.940289154580504 0.8667899853871899 0.2056585000529646 0.07785302143653842 1027.2555728927694 3874487.3382903594 0.02850390571483955 0.025731406586186133 5.394377318935985e-07 6.268058679351299 -0.07349916919331412 LTTTGQVTS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 7 LTTTGQVTSPVK 12 0 P49916-4;P49916-3;P49916-2;P49916;K7ENR9;K7ERZ5 P49916-4 LIG3 DNA ligase 3 1 LTTTGQVT(0.001)S(0.999)PVK;LTTTGQVT(0.018)S(0.982)PVK;LTTTGQVT(0.009)S(0.991)PVK;LTTTGQVT(0.103)S(0.897)PVK;LTTTGQVT(0.011)S(0.989)PVK;LTTTGQVT(0.013)S(0.987)PVK;LTTTGQVT(0.013)S(0.987)PVK 268.2 1.0085999999999999e-21 29812840000.0 25759000.0 30304100.0 20913400.0 19081300.0 19672000.0 29658800.0 21964000.0 28880600.0 29350600.0 30531200.0 True False 24330096.92070656 28848245.548618536 22261511.226623107 20894781.01499797 21220074.48163098 29473688.42782673 24184335.4679829 28780419.93938272 24021270.908415273 30260717.320914153 0.8040158685825748 0.9533232554497506 0.7356570893723482 0.6904919269893486 0.701241621492069 0.9739917304424411 0.7991990147328176 0.9510818806496583 0.7938103599353014 1.0 24.8509428508098 -6.26096782570646 24.999998339667762 0.894033114295776 0.7796478657911274 0.3136278174016778 0.09311470877067791 63.40509356421705 3361548.214950834 0.032823430795781976 0.030925244622275267 5.483175850028466e-07 6.26096782570646 -0.1143852485046486 LTVAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 LTVASPK 7 0 O75179-6;O75179-2;O75179;H0YM23;O75179-4;O75179-7 O75179-6 ANKRD17 Ankyrin repeat domain-containing protein 17 1 LTVAS(1)PK;LTVAS(1)PK;LTVAS(1)PK;LT(0.004)VAS(0.996)PK;LT(0.004)VAS(0.996)PK;LTVAS(1)PK;LTVAS(1)PK;LTVAS(1)PK;LTVAS(1)PK;LTVAS(1)PK 142.98 0.0015784 77926780000.0 154172800.0 148318000.0 128405800.0 107292300.0 117187700.0 129023900.0 113835700.0 128570900.0 152604300.0 122924300.0 True False 145620527.44814262 141192580.65014327 136683043.32454428 117489327.93339372 126409705.28319581 128218613.9811145 125343323.48536953 128124917.55657354 124895205.96134573 121835286.33565834 1.1952245677574518 1.1588808537877544 1.1218674608600674 0.9643292306114714 1.0375459284835993 1.0523930942951123 1.0287932770153836 1.051624052522741 1.025115216762878 1.0 26.860356790937285 -5.0385476953317445 4.062047662918722 1.027160233298213 1.1723031291155377 0.8522863655066808 0.026443449502779635 0.0773142817602375 2.7657671809221624 0.007402184359903751 0.01449728095282028 9.150657588986707e-06 5.0385476953317445 0.14514289581732465 LTVENS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 11 LTVENSPK 8 0 O43583;F8VVL1 O43583 DENR Density-regulated protein 1 LTVENS(1)PK;LTVENS(1)PK;LTVENS(1)PK;LTVENS(1)PK;LTVENS(1)PK;LTVENS(1)PK;LTVENS(1)PK;LTVENS(1)PK;LTVENS(1)PK;LTVENS(1)PK;LTVENS(1)PK 173.28 0.00010183 134049900000.0 120513200.0 109659000.0 98024400.0 95790600.0 96820000.0 96108100.0 98287000.0 106773100.0 113936300.0 98641700.0 True False 113828092.55889185 104390817.03848523 104343209.6685854 104894509.82350595 104439183.16955647 95508253.69841054 108222809.14868127 106402729.03712885 93248340.02039053 97767811.28008142 1.1642696207323446 1.0677421911331377 1.0672552479431807 1.0728941197528525 1.0682368951715935 0.9768885326153228 1.106937014664763 1.0883206614118675 0.9537734229649093 1.0 26.542856219875926 -1.0000000000000002 0.5481098100392835 1.0365195673153589 6.150761782870476 0.40188077914330766 0.04633978455475309 150.80303459402043 1.3921787557983374 0.022931672014762084 907.1267829864055 0.09999999999999995 1.0000000000000002 5.114242215555118 LTVENS(ph)PKQEAGISEGQGTAGEEEEK ddPTM_KYSE-520_SHP099_60min_R1 10 LTVENSPKQEAGISEGQGTAGEEEEK 26 1 O43583;F8VVL1 O43583 DENR Density-regulated protein 1 LT(0.001)VENS(0.999)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK;LTVENS(1)PKQEAGISEGQGTAGEEEEK 369.42 1.5262999999999996e-86 13341710000.0 9132350.0 11107360.0 9160020.0 6410660.0 7294150.0 9311530.0 6752300.0 8587660.0 13370090.0 9174090.0 True False 8625760.340611622 10573745.753112728 9750489.545750193 7019927.198964796 7868158.106963634 9253413.28733333 7434888.380097476 8557871.411834903 10942418.688541096 9092814.699934028 0.948634787495912 1.1628682758914513 1.0723290716372937 0.7720301612454203 0.8653160068268761 1.0176621423287628 0.8176663250545971 0.9411685703764527 1.2034137997577898 1.0 23.116295522166453 LTVENS(ph)PKQEAGISEGQGTAGEEEEKKK ddPTM_KYSE-520_SHP099_60min_R1 3 LTVENSPKQEAGISEGQGTAGEEEEKKK 28 3 O43583;F8VVL1 O43583 DENR Density-regulated protein 1 LTVENS(1)PKQEAGISEGQGTAGEEEEKKK;LT(0.001)VENS(0.999)PKQEAGISEGQGTAGEEEEKKK;LT(0.002)VENS(0.998)PKQEAGISEGQGTAGEEEEKKK 324.99 6.407499999999999e-65 8655530000.0 4457200.0 5363200.0 5845500.0 3306810.0 3820780.0 3222330.0 2555200.0 3103980.0 7007900.0 3311300.0 True False 4209950.230792087 5105543.821672681 6222310.283130694 3621088.2281713192 4121453.6487355693 3202218.2432073806 2813504.5523488387 3093213.017854379 5735442.014782773 3281964.4581524204 1.2827531450971517 1.555636536218568 1.8959103191000244 1.1033295071726061 1.2557886294282843 0.9757016823424307 0.8572623464462193 0.9424882741099826 1.74756371920357 1.0 21.646128184676442 -5.290937439312386 23.958178568509886 1.111568372452321 1.575853636187866 0.3668248389068369 0.2717125868586548 426.5779972853601 346463.4910665941 0.07759420055792317 0.1151151723261335 5.11755549286489e-06 5.290937439312386 0.4642852637355448 LTVNGVCAS(ph)TPPLTPIK ddPTM_KYSE-520_SHP099_60min_R1 1 LTVNGVCASTPPLTPIK 17 0 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 LTVNGVCAS(0.681)T(0.319)PPLTPIK 203.26 6.8901e-13 362310000.0 420580.0 629880.0 412680.0 420170.0 543980.0 954060.0 666820.0 834700.0 965190.0 901470.0 True False 397249.58899455593 599619.6193308448 439282.0131113458 460102.83047128277 586788.131177187 948105.3576494127 734228.6731360572 831804.6205204442 789935.8264598802 893483.6771330471 0.4446075503799071 0.6711030483006312 0.49165085423931376 0.5149538175645593 0.6567418590790991 1.0611333837587633 0.8217594701808127 0.9309678976895083 0.8841077309823672 1.0 19.76908184764951 -6.079791491064022 4.516643237882081 0.9264745842231663 0.5416046533601561 0.84998674636459 0.08173294120701492 0.0825734823057634 3.058518438564824 0.026269370210230285 0.02674752770658177 8.321632047255562e-07 6.079791491064022 -0.38486993086301025 LTVNGVCAST(ph)PPLT(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 1 LTVNGVCASTPPLTPIK 17 0 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 2 LTVNGVCAS(0.459)T(0.541)PPLT(1)PIK 83.41799999999999 0.0085047 1094700000.0 538400.0 429500.0 308500.0 436350.0 585730.0 907600.0 943400.0 1007400.0 1184600.0 1202100.0 True False 508533.87872620893 408866.1753073569 328386.4036174523 477820.5728065885 631823.6186521824 901935.3317428739 1038768.0786967328 1003905.5645289264 969506.5013358763 1191450.329219649 0.42681920198828405 0.3431667819296734 0.27561904643774104 0.4010411186167881 0.5302979093270307 0.7570062382152384 0.8718517702513735 0.8425912015874327 0.8137196134486472 1.0 20.184287377098943 -6.1734327759701495 1.5661352801386037 0.8749145016773967 0.3453714711052005 0.9446826631506057 0.057698973916002295 0.08228232450825865 0.4033952571158514 0.024520089465310906 0.023814699146050413 6.707601049858784e-07 6.1734327759701495 -0.5295430305721962 down LTVS(ph)DGES(ph)GEEKK ddPTM_KYSE-520_SHP099_60min_R1 2 LTVSDGESGEEKK 13 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6 P46100-2 ATRX Transcriptional regulator ATRX 2 LT(0.012)VS(0.988)DGES(1)GEEKK;LT(0.001)VS(0.999)DGES(1)GEEKK 174.39 1.4047999999999999e-06 0.0 1859800.0 1621170.0 1487200.0 1719550.0 1694710.0 1625030.0 1635570.0 1786590.0 2021750.0 1680300.0 True False 1756633.1865806144 1543286.5597742214 1583067.2916041322 1882975.51499844 1828074.0354191172 1614887.5849957264 1800909.3772249504 1780392.7362832401 1654651.164170018 1665413.849253617 1.054772774567642 0.9266685037270892 0.9505548979994433 1.1306351966763857 1.0976695289512568 0.9696614362366839 1.081358473169932 1.0690392283462473 0.9935375311737544 1.0 20.6674492956155 -5.230036905826094 24.991603851569103 1.051809720360268 0.9722656923193558 0.2507601861565 0.05627849128797956 868.3878761789524 691103.8170945169 0.015240924340519886 0.026395379429515167 5.887936182514963e-06 5.230036905826094 -0.07954402804091232 LTWHS(ph)CPEDEAQ ddPTM_KYSE-520_SHP099_60min_R1 4 LTWHSCPEDEAQ 12 0 Q13185 Q13185 CBX3 Chromobox protein homolog 3 1 LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ;LTWHS(1)CPEDEAQ 166.45 3.4447000000000002e-06 4390460000.0 3139350.0 3218600.0 2922640.0 2734670.0 3172610.0 2827310.0 2716810.0 2804590.0 3567700.0 2973230.0 True False 2965203.9973609275 3063973.624782902 3111038.050789338 2994572.2145914827 3422276.357318383 2809663.7095526047 2991451.6683104406 2794861.5318862265 2919895.614398112 2946889.495337937 1.0062148587695483 1.0397314285554975 1.055702311101617 1.0161806947050376 1.1613181840488154 0.9534336845672607 1.0151217658629557 0.948410700946804 0.9908398733707083 1.0 21.490761531544816 LTWHSYPS(ph)EDDDKKDDKN ddPTM_KYSE-520_SHP099_60min_R1 7 LTWHSYPSEDDDKKDDKN 18 3 P83916 P83916 CBX1 Chromobox protein homolog 1 1 LTWHSYPS(1)EDDDKKDDKN;LTWHSYPS(1)EDDDKKDDKN;LTWHSYPS(1)EDDDKKDDKN;LTWHSYPS(1)EDDDKKDDKN;LTWHS(0.002)Y(0.002)PS(0.996)EDDDKKDDKN;LTWHSYPS(1)EDDDKKDDKN;LTWHSYPS(1)EDDDKKDDKN 260.45 1.1615999999999999e-29 12238010000.0 6337990.0 5375440.0 5610150.0 5468460.0 5249440.0 5212820.0 5095100.0 5027580.0 6379990.0 4755850.0 True False 5986409.06023018 5117195.793700067 5971789.24555738 5988180.794247545 5662541.062772118 5180284.856782602 5610162.431384058 5010140.498426 5221544.642459791 4713716.868995307 1.2699975892922346 1.085596767035089 1.266896042237306 1.2703734570133145 1.2012900265643331 1.0989809105540826 1.1901780669698605 1.0628853275809655 1.1077340424930366 1.0 22.168433674547035 -7.395665016140115 0.5966351973700648 1.0064585706293314 1.2192220068502286 0.558080952218641 0.06133706796953988 0.5903687522357018 0.4566171354117196 0.06057542525233161 0.03252586873421319 4.02100843242957e-08 7.395665016140115 0.21276343622089722 LTWHSYPSEDDDKKDDKN ddPTM_KYSE-520_SHP099_60min_R1 1 LTWHSYPSEDDDKKDDKN 18 3 P83916 P83916 CBX1 Chromobox protein homolog 1 0 167.69 4.4636e-08 471760000.0 200940.0 173600.0 155770.0 152980.0 173320.0 184060.0 137510.0 149640.0 174660.0 99071.0 False True 189793.45763604066 165259.99542108775 165811.18344081214 167519.17320488568 186959.29794409737 182911.2132664097 151410.85276827193 149120.93376623854 142946.14682029697 98193.30801607159 1.9328553184599566 1.6830067013735717 1.6886199965243387 1.7060141529957145 1.9039922548845913 1.862766587275704 1.5419671241088044 1.5186466041232818 1.4557626146671885 1.0 16.583337086156607 -8.006401580067008 0.7262836350635912 1.0028971061088563 1.7879080021743647 0.847821635037417 0.10175578198872463 0.2884941635113483 0.35018753547701287 0.10693218692916433 0.04174133077977102 9.853679218483517e-09 8.006401580067008 0.7850108960655084 LVAAAS(ph)PSAMLSQSLDLSDR ddPTM_KYSE-520_SHP099_60min_R1 3 LVAAASPSAMLSQSLDLSDR 20 0 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 LVAAAS(0.976)PS(0.023)AMLSQSLDLSDR;LVAAAS(0.985)PS(0.012)AMLS(0.002)QS(0.001)LDLSDR;LVAAAS(0.83)PS(0.17)AMLSQSLDLSDR 123.19 8.681e-07 81153000.0 143815.0 169664.0 207125.0 132244.0 113798.0 155755.0 123593.0 130698.0 174983.0 169618.0 True False 135837.29526190518 161513.08676914405 220476.60891171743 144812.42999939143 122753.25517795047 154782.87527061615 136086.9865914408 130244.63914314251 143210.49816246447 168115.31648080726 0.80800071109174 0.9607279702416825 1.3114605707974736 0.8613874870581695 0.7301729416900838 0.9206946666771245 0.8094859495266575 0.7747339259121686 0.8518587191239888 1.0 17.359091644604455 -5.490912594549472 24.998697099272828 0.8344232879512024 1.0311786722260479 0.2608909556659623 0.13547873062512375 811.9312422228112 634959.564964174 0.03814606214739277 0.05651955699621417 3.229143948945687e-06 5.490912594549472 0.1967553842748455 LVAIVDVIDQNR ddPTM_KYSE-520_SHP099_60min_R1 1 LVAIVDVIDQNR 12 0 P50914;E7EPB3 P50914 RPL14 60S ribosomal protein L14 0 82.749 0.049012 91639000.0 46138.0 75422.0 89941.0 82606.0 74626.0 77734.0 65272.0 73842.0 86226.0 66507.0 False True 43578.63316617725 71798.61390927002 95738.74077068816 90456.84940360046 80498.64163614246 77248.83327203682 71870.33075333171 73585.85933685231 70569.53198057333 65917.7997216631 0.6611057005875098 1.0892143580707876 1.4523958805503752 1.372267426788411 1.2211973393536608 1.171896416418916 1.0903023319468046 1.1163276026743532 1.0705686821852685 1.0 16.008380466979215 -6.793545839384346 2.99864879140756 1.0743441935454152 1.184951466416658 0.04157468747693538 0.19970612390909545 0.9406872649463361 17.30783565414606 0.09778851883204415 0.06540059147244683 1.6086225802896142e-07 6.793545839384346 0.11060727287124283 LVARPEPATGYTLEFR ddPTM_KYSE-520_SHP099_60min_R1 2 LVARPEPATGYTLEFR 16 1 Q16658 Q16658 FSCN1 Fascin 0 ; 121.82 0.00014233 972420000.0 1783400.0 1291710.0 1294710.0 705650.0 1308640.0 1521300.0 1089830.0 1258080.0 1529430.0 1425650.0 False True 1684471.2468802389 1229654.3127037622 1378169.0782092453 772714.7638385908 1411622.522856933 1511805.0024024162 1200000.652115816 1253716.0141180784 1251724.0657927797 1413019.8501389166 1.1921072776965131 0.8702314497442287 0.975335964370037 0.5468534385858937 0.9990111056954747 1.0699106613780323 0.8492454313347698 0.8872600154872723 0.8858503054077551 1.0 20.430350302155137 -4.25869355598699 24.221294819534588 0.8930847363982927 1.1921074467533475 0.29744154457835037 0.13531093094636795 213.80329735994334 1885822.8921581027 0.03386938013178472 0.22603718369697579 5.5119649085889006e-05 4.25869355598699 0.2990227103550548 LVDTGDKFR ddPTM_KYSE-520_SHP099_60min_R1 2 LVDTGDKFR 9 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ; 93.556 0.015569999999999999 352820000.0 1104470.0 1013410.0 684190.0 633870.0 1057690.0 1042190.0 760100.0 918040.0 928720.0 924610.0 False True 1043202.847393641 964724.2624405785 728293.982142705 694112.814220035 1140924.185567115 1035685.3056292478 836938.3258611278 914855.5335121476 760087.8591259952 916418.6747356959 1.1383474345877018 1.0527112650981434 0.7947175261926566 0.7574188887194206 1.2449813791672988 1.130144260676431 0.9132707014100394 0.9982942935727503 0.8294111415235094 1.0 19.805647332549135 LVDVS(ph)PDRGS(ph)PPSR ddPTM_KYSE-520_SHP099_60min_R1 1 LVDVSPDRGSPPSR 14 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 2 LVDVS(0.999)PDRGS(0.508)PPS(0.493)R 95.001 0.005800100000000001 0.0 432530.0 436430.0 397290.0 396740.0 446130.0 419940.0 391950.0 411670.0 444590.0 403280.0 True False 408536.69867282204 415463.24770521506 422899.949086475 434446.0503157698 481237.8928675297 417318.9986911664 431572.1310633711 410242.0128545005 363863.66320185486 399707.25294709275 1.0220897811101215 1.0394188362656702 1.0580242063869982 1.0869106004770828 1.2039758831477314 1.0440616116275598 1.0797205401736758 1.0263561890101658 0.9103253956965791 1.0 18.60858422606899 -7.534836488508029 4.10484497742516 0.9556253172707933 1.0774178133750298 0.4677440267785232 0.051291723583230656 0.18920810635277877 7.423386975299221 0.03809968138474459 0.01418665472636682 2.9185256295170258e-08 7.534836488508029 0.12179249610423659 LVDVS(ph)PDRGSPPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 LVDVSPDRGSPPSR 14 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 2 LVDVS(0.984)PDRGS(0.134)PPS(0.882)R 80.596 0.020859 0.0 381920.0 369330.0 362820.0 310840.0 370700.0 327940.0 341720.0 396590.0 382350.0 374560.0 True False 360734.13626135566 351586.83242436824 386207.95773252536 340382.1401425461 399871.98100552097 325893.20481683384 376264.3924658125 395214.3218548014 312924.8782591358 371241.6898032706 0.971696191913459 0.9470564381136237 1.0403140820126795 0.9168747732048151 1.0771203557914582 0.8778464643600024 1.0135294682695888 1.0645741917192393 0.8429141630751702 1.0 18.50199920617164 -6.263101060418535 24.99532214221663 0.967168541564354 0.9868572621820647 0.036392161457283634 0.07338205302289601 1000.0064665225711 15042295.455138331 0.02423215839985113 0.022487509672197387 5.456308778957152e-07 6.263101060418535 0.019688720617710764 LVEALCAEHQINLIK ddPTM_KYSE-520_SHP099_60min_R1 3 LVEALCAEHQINLIK 15 0 P25398 P25398 RPS12 40S ribosomal protein S12 0 ;; 216.46 5.9934e-14 2431143000.0 1068800.0 926352.0 562601.0 1084080.0 1020480.0 1002300.0 793804.0 908410.0 693610.0 618003.0 False True 1009511.5334000225 881848.6594373003 598867.1606534269 1187110.6372594621 1100785.970263054 996044.2739156927 874049.4551004675 905258.937734489 567667.9084852071 612527.9742190582 1.6481068226918094 1.4396871596952159 0.9776976495105417 1.9380513008780822 1.797119505711555 1.6261204644336418 1.4269543463950947 1.4779062766702986 0.9267624212738278 1.0 19.22441620809571 -7.72346377048012 4.9750452514852705 0.956335534468077 1.5441616565665277 0.4776425516349879 0.24229438020289634 0.1665399069076292 9.411141686911462 0.20183187084565185 0.06616517470264154 1.890323918365365e-08 7.72346377048012 0.5878261220984508 LVEDERS(ph)DREET(ph)ES(ph)S(ph)EGEEAAAGGGAK ddPTM_KYSE-520_SHP099_60min_R1 1 LVEDERSDREETESSEGEEAAAGGGAK 27 2 H0YLQ6;Q96G23 H0YLQ6 CERS2 Ceramide synthase 2 4 LVEDERS(1)DREET(1)ES(1)S(1)EGEEAAAGGGAK 122.45 0.00014998 749640000.0 820260.0 969220.0 695200.0 1114200.0 879840.0 905680.0 921430.0 1145700.0 1342800.0 784720.0 True False 774758.5426522299 922657.2163711202 740013.7043593281 1220093.233003556 949078.4023951917 900027.3151750609 1014577.1366901967 1141725.83410839 1098981.3692333398 777767.991302922 0.9961306601912857 1.186288490511777 0.9514581631466376 1.5687110380560247 1.2202590142663101 1.1571925371566516 1.304472732274017 1.4679516859465551 1.4129938253081347 1.0 19.56898033695545 -5.238655389558338 24.98344741524392 1.314359132104136 1.058792041457259 0.34898943769477453 0.16192355224785476 909.3909969685794 997178.1484226506 0.043216075161133946 0.07478802127940833 5.772243062437064e-06 5.238655389558338 -0.255567090646877 LVEDKPGS(ph)RR ddPTM_KYSE-520_SHP099_60min_R1 1 LVEDKPGSRR 10 2 Q08170;A0A0D9SEM4 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 LVEDKPGS(1)RR 55.291000000000004 0.04919 0.0 988130.0 950450.0 888130.0 841040.0 867240.0 834480.0 859040.0 899120.0 1158300.0 891870.0 True False 933316.4591116812 904788.955345464 945380.2808582424 920972.1887321033 935486.8540793841 829271.7007853616 945880.1466224743 896001.1625761846 947981.9183668277 883968.7256643599 1.0558252028772097 1.0235531292868494 1.069472542875007 1.0418606020704329 1.0582804876680507 0.9381233483821615 1.0700380218899532 1.0136118355349977 1.0724156758536425 1.0 19.753635803185787 LVEIDNGK ddPTM_KYSE-520_SHP099_60min_R1 1 LVEIDNGK 8 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;H0YAB0 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 107.47 0.017899 0.0 393550.0 450680.0 309640.0 203300.0 386670.0 426650.0 276390.0 361870.0 373750.0 406810.0 False True 371718.9969775255 429028.6563155282 329599.88984151714 222621.57087562644 417098.7291486508 423987.11909221846 304330.19850645575 360614.75743109314 305886.42147077754 403205.97989339125 0.9219084426173664 1.0640433865315304 0.8174479206103645 0.5521286438620979 1.0344557123357465 1.0515397594160727 0.7547760045297975 0.8943685744106291 0.7586356272584418 1.0 18.621157509848466 -10.383178536635171 5.407174015729911 1.0000582154657383 0.874019771080745 0.05989712977384165 0.15179468342041588 0.00011056227511950632 1.261220693167872e-05 0.1525382258212171 0.036978885172721146 4.1382951627253366e-11 10.383178536635171 -0.12603844438499323 LVEPHS(ph)PS(ph)PSSK ddPTM_KYSE-520_SHP099_60min_R1 2 LVEPHSPSPSSK 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 2 LVEPHS(0.944)PS(0.568)PS(0.408)S(0.079)K;LVEPHS(0.974)PS(0.487)PS(0.301)S(0.239)K 82.54299999999999 0.0071304 2152800000.0 2817200.0 2479800.0 2469700.0 2458400.0 2481500.0 2459000.0 2257600.0 2411400.0 2866700.0 2264600.0 True False 2660924.3000510302 2360666.6857443154 2628900.813659712 2692045.5968550886 2676779.9321963857 2443652.4688802627 2485820.2400527312 2403035.416224989 2346179.543626165 2244537.4058321416 1.1855112296800938 1.0517386253445484 1.1712439306330344 1.1993765797175644 1.1925753276559872 1.0887109577816552 1.1074978004793536 1.0706150006593835 1.0452842253953618 1.0 21.097986708686946 -7.359108804782725 0.8891644718111497 1.0069170639120615 1.1535889947829014 0.6026705234060439 0.042722525592139265 0.43492748735329584 0.6309767039742448 0.04144014792947688 0.016909554005986063 4.374125054814452e-08 7.359108804782725 0.14667193087083996 LVEPHS(ph)PSPS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 2 LVEPHSPSPSSK 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 2 LVEPHS(0.63)PS(0.374)PS(0.652)S(0.344)K;LVEPHS(0.995)PS(0.072)PS(0.544)S(0.389)K 233.28 3.8169e-15 1760870000.0 2205930.0 1959360.0 1911950.0 2016570.0 1955780.0 1818340.0 1862380.0 1953830.0 2292010.0 1893710.0 True False 2083562.665487568 1865229.4045406815 2035197.356228162 2208224.2064961204 2109688.759134008 1806991.0655810258 2050647.5454772348 1947052.619757352 1875838.7608701987 1876933.2026840856 1.110088873971644 0.9937644034818782 1.0843206105138705 1.1765065498006408 1.124008438934893 0.9627359476602364 1.0925522243118355 1.0373585042733502 0.9994168989006526 1.0 20.839945876993657 -6.242899109370223 24.960421553991527 1.0253813346991407 1.0955921220539564 0.35614508783889776 0.052876188113246514 1125.584640779319 1515354.4835000006 0.018652051516330655 0.01861786521648664 5.71611411873e-07 6.242899109370223 0.07021078735481567 LVEPHS(ph)PSPSS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 LVEPHSPSPSSK 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 2 LVEPHS(0.87)PS(0.131)PS(0.164)S(0.836)K 201.3 3.2572e-08 950270000.0 1314800.0 1141100.0 1099700.0 1021600.0 1063000.0 1041400.0 1029300.0 1152800.0 1313700.0 1011800.0 True False 1241865.4230111798 1086279.8431739805 1170588.421582213 1118692.5568447588 1146652.0523573484 1034900.2363122831 1133351.6889999453 1148801.2058655438 1075165.1956820346 1002836.2391684883 1.2383531572820752 1.0832076073304653 1.1672777427277838 1.115528650791812 1.1434090707652391 1.0319733131806057 1.1301463237304579 1.1455521459995142 1.072124394480916 1.0 19.93565460575426 -13.999999999734918 0.01974620479648327 8.754407283906322e-08 1.9034082164287962 0.4809312483723037 0.04715402430253336 3145.974229658522 4.692535448178953 303.83658112412024 167.29618278105445 1.0000000006103743e-14 13.999999999734918 1.9034081288847233 LVEPHS(ph)PSPSSK ddPTM_KYSE-520_SHP099_60min_R1 7 LVEPHSPSPSSK 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 LVEPHS(0.991)PS(0.009)PSSK;LVEPHS(0.895)PS(0.084)PS(0.016)S(0.005)K;LVEPHS(0.996)PS(0.004)PSSK;LVEPHS(0.5)PS(0.5)PSSK;LVEPHS(0.989)PS(0.011)PSSK;LVEPHS(0.998)PS(0.001)PSSK;LVEPHS(0.996)PS(0.003)PSSK 263.7 1.3529e-21 3867300000.0 5642700.0 6183620.0 5743670.0 7372580.0 5447860.0 5419760.0 5331250.0 5310870.0 7315480.0 5628810.0 True False 5329688.182556423 5886549.613397147 6113916.158396923 8073267.786553001 5876575.587916747 5385933.267482101 5870184.7779859705 5292447.831536371 5987173.240243599 5578943.122547909 0.9553221937352087 1.0551370544729184 1.095891466196682 1.4470962706043742 1.053349256092238 0.9654038675738175 1.0522037326856724 0.9486470313967469 1.0731733786719897 1.0 22.411560412476366 -5.988002946270168 24.995971706153743 1.0076603851578436 1.1444884007975578 0.2021207735913534 0.12218986649347559 375.5224891890078 782399.8536447898 0.03993723503001595 0.045253830112344344 1.0280093240487367e-06 5.988002946270168 0.13682801563971414 LVEPHSPS(ph)PS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 LVEPHSPSPSSK 12 0 O15014 O15014 ZNF609 Zinc finger protein 609 2 LVEPHS(0.317)PS(0.7)PS(0.591)S(0.392)K 118.73 0.0011312000000000002 378100000.0 691790.0 630440.0 566090.0 596620.0 622670.0 574640.0 572700.0 599860.0 701130.0 557150.0 True False 653415.0296508255 600152.7160902676 602581.067176025 653322.5854196555 671670.5864923333 571053.4586081154 630594.1050133758 597779.2256683767 573822.4660489805 552214.0844561411 1.1832639696148899 1.0868116786288415 1.0912091598849545 1.183096563107573 1.2163228092123752 1.0341160696227598 1.1419377425594437 1.0825135441033007 1.0391304427052432 1.0 19.074868159385424 -7.6726390730071925 0.8837296339733787 0.9985499511897462 1.1386004826786609 0.46583640831077844 0.05031271449712721 0.5276283873544106 0.8507996548274223 0.04876123605522634 0.018251061827444896 2.1250097498325543e-08 7.6726390730071925 0.14005053148891466 LVEQANS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 LVEQANSPK 9 0 O95391 O95391 SLU7 Pre-mRNA-splicing factor SLU7 1 LVEQANS(1)PK;LVEQANS(1)PK;LVEQANS(1)PK;LVEQANS(1)PK;LVEQANS(1)PK;LVEQANS(1)PK;LVEQANS(1)PK;LVEQANS(1)PK;LVEQANS(1)PK;LVEQANS(1)PK 222.2 4.0209e-09 56961450000.0 57741800.0 54860200.0 49080900.0 42142000.0 46209700.0 50749800.0 45548900.0 49055000.0 60846300.0 49430100.0 True False 54538747.24857541 52224633.645160936 52244733.3462166 46147163.00954572 49846140.492772676 50433051.67351754 50153427.32642527 48884839.654523045 49798145.73040104 48992187.77003582 1.1132131413394837 1.0659788023816752 1.0663890657720347 0.9419290117468453 1.0174303855697406 1.0294100747295667 1.0237025454311244 0.9978088727938288 1.0164507444359967 1.0 25.54604838152137 -5.04960540225124 10.801556162342507 1.0060049420783226 1.0837863113234534 0.6677324997642193 0.025480891936685394 0.48677101696265956 105.28128138048922 0.007018882093387066 0.012212006374480678 8.920610921806081e-06 5.04960540225124 0.0777813692451308 LVES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 LVESPK 6 0 Q96S94;Q96S94-3 Q96S94 CCNL2 Cyclin-L2 1 LVES(1)PK;LVES(1)PK;LVES(1)PK;LVES(1)PK;LVES(1)PK;LVES(1)PK;LVES(1)PK;LVES(1)PK 118.32 0.0083225 8057600000.0 18029080.0 15471480.0 14217660.0 13610870.0 15299120.0 14931280.0 14785350.0 15536290.0 17119460.0 15318930.0 True False 17028970.99232004 14728206.877635052 15134153.112660322 14904442.992542716 16503073.703914713 14838088.343042921 16279997.469110379 15482398.236187339 14010997.610467223 15183216.198147204 1.1215654687442356 0.9700320857864307 0.9967685973217671 0.9816393837796694 1.0869287171138728 0.9772691206790299 1.0722364258434924 1.0197047867945557 0.9227951066241799 1.0 23.855974087484512 LVES(ph)PKEGK ddPTM_KYSE-520_SHP099_60min_R1 3 LVESPKEGK 9 1 Q96S94;Q96S94-3 Q96S94 CCNL2 Cyclin-L2 1 LVES(1)PKEGK;LVES(1)PKEGK;LVES(1)PKEGK 76.32600000000001 0.010236 1234530000.0 2875900.0 3032330.0 3038140.0 2247480.0 2658910.0 2508080.0 2088500.0 2246600.0 3772290.0 2516810.0 True False 2716368.094035481 2886652.315179878 3233983.3655958725 2461079.8234705003 2868151.0898715677 2492426.1423949613 2299625.961795766 2238807.068960382 3087337.2276923056 2494513.021448548 1.0889372276990974 1.1572007403287143 1.2964387589036992 0.9865973046880977 1.149783971945775 0.9991634122429336 0.9218737052173765 0.8974926367232675 1.2376512774824115 1.0 21.250326769610666 -5.762923252933322 1.4261957312634415 1.0049562757925241 1.1671531488511149 0.22755557635009738 0.1119194568847108 0.5660588630565407 2.4025228511321703 0.04264377600638131 0.05914097480897112 1.7261429032332794e-06 5.762923252933322 0.16219687305859076 LVETTMVPS(ph)PEAK ddPTM_KYSE-520_SHP099_60min_R1 1 LVETTMVPSPEAK 13 0 Q16236-3;Q16236-2;Q16236;C9J0Y1;K7EIW5;C9J1A8 Q16236-3 NFE2L2 Nuclear factor erythroid 2-related factor 2 1 LVETTMVPS(1)PEAK 152.16 5.0327999999999995e-06 380960000.0 625450.0 703180.0 469960.0 445850.0 496090.0 797070.0 571000.0 720900.0 657930.0 758890.0 True False 590755.0416963355 669398.1773053013 500254.37356258696 488223.4499503094 535129.4606340138 792095.190471896 628722.2524229755 718399.3661593253 538466.4970656018 752166.8250074855 0.7854042774227066 0.8899597204365395 0.6650843362542724 0.6490893159844568 0.7114504958772786 1.0530844543217033 0.835881391627075 0.9551064235679045 0.7158870601082985 1.0 19.520693150859366 -6.229039094113175 24.98966723063696 0.904429150275715 0.7392831899351722 0.39346100727278877 0.10643915752528572 734.7289055717562 566681.4785458113 0.035496925783581906 0.03549436858394347 5.901479541241684e-07 6.229039094113175 -0.16514596034054285 LVFDDFCDSSNVS(ph)NKDSSEDDISR ddPTM_KYSE-520_SHP099_60min_R1 1 LVFDDFCDSSNVSNKDSSEDDISR 24 1 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 LVFDDFCDS(0.141)S(0.141)NVS(0.534)NKDS(0.078)S(0.105)EDDISR 134.69 3.9808e-11 0.0 151870.0 107190.0 100400.0 111060.0 98106.0 89326.0 108450.0 126580.0 120100.0 89989.0 True False 143445.46835466084 102040.43150452984 106871.94464567983 121615.10900859348 105826.38405321739 88768.48330020272 119413.18437000288 126140.92352399418 98292.86747462326 89191.76747038253 1.608281486318724 1.144056614175898 1.1982265592075891 1.363523926678296 1.1865039459876006 0.995254223767677 1.338836394397676 1.4142664407438856 1.1020396866477937 1.0 16.444622932993575 -1.0016688363829047 0.024291201240958404 1.054864811940828e-07 2.9089046643816148 0.2516152267385974 0.1597805097233522 3828.081164746855 7.170469519558024 298.53617439571934 611.6726808259957 0.09961647357070562 1.0016688363829047 2.9089045588951334 LVFDFVEYEKDT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 LVFDFVEYEKDTPK 14 1 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 LVFDFVEYEKDT(1)PK;LVFDFVEYEKDT(1)PK 233.63 7.6423e-18 1803410000.0 2411970.0 2385560.0 2058280.0 1773620.0 1764980.0 2238530.0 1731160.0 2121950.0 2550120.0 2294800.0 True False 2278173.215957011 2270954.1168014403 2190960.0221644426 1942184.311541704 1903873.8846375078 2224558.5039294567 1906162.5472934453 2114589.4507168517 2087082.4912938073 2274469.857327383 1.0016282293729668 0.9984542593454837 0.9632838241870267 0.8539063752745744 0.8370627021079347 0.9780558299169659 0.8380689421548468 0.9297065177208377 0.9176127283332014 1.0 21.117098884598956 -5.041950062895906 5.099517643537332 0.9019498361581745 0.9966133375444064 0.34144838224769336 0.05204733176452298 0.19563780476683687 12.370682081162382 0.013709694301596367 0.0255412703504939 9.079249214072965e-06 5.041950062895906 0.09466350138623192 LVGATAT(ph)SSPPPK ddPTM_KYSE-520_SHP099_60min_R1 1 LVGATATSSPPPK 13 0 Q96QD9-4;Q96QD9;H9KVD1 Q96QD9-4 FYTTD1 UAP56-interacting factor 1 LVGAT(0.008)AT(0.377)S(0.377)S(0.239)PPPK 80.469 0.044459 983140000.0 1584300.0 1926900.0 1410100.0 1159300.0 1089900.0 1738400.0 1201000.0 1747600.0 1820200.0 1936100.0 True False 1496415.7207762494 1834328.8316641347 1500997.302239771 1269479.5234437457 1175668.929317285 1727550.00077326 1322408.8006304614 1741537.9834929055 1489697.5635079874 1918947.6602630052 0.7798105971119375 0.9559035244414781 0.7821981460578497 0.6615498430372794 0.6126633642296171 0.9002590516390047 0.6891322926698356 0.9075484545806818 0.7763096380147304 1.0 20.871883931556386 -10.05921384613731 7.34585312566564 1.0000000263417816 0.7854523356483812 0.27119749550991834 0.10571332316130957 4.704675136973365e-08 5.992982042282258e-09 0.10551325534411012 0.02559072028385526 8.725416240336877e-11 10.05921384613731 -0.2145476906934004 LVGATATSS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 9 LVGATATSSPPPK 13 0 Q96QD9-4;Q96QD9;H9KVD1 Q96QD9-4 FYTTD1 UAP56-interacting factor 1 LVGATAT(0.034)S(0.034)S(0.932)PPPK;LVGATAT(0.027)S(0.009)S(0.964)PPPK;LVGATAT(0.004)S(0.014)S(0.981)PPPK;LVGAT(0.007)AT(0.136)S(0.136)S(0.721)PPPK;LVGATAT(0.009)S(0.08)S(0.911)PPPK;LVGATAT(0.153)S(0.063)S(0.784)PPPK;LVGATAT(0.001)S(0.014)S(0.985)PPPK;LVGATAT(0.041)S(0.021)S(0.938)PPPK;LVGATAT(0.021)S(0.021)S(0.957)PPPK 218.68 2.3678e-11 45004630000.0 18105000.0 21223200.0 14495900.0 11679260.0 11947150.0 18602400.0 13617120.0 17547100.0 19624400.0 19466100.0 True False 17100679.55857731 20203605.615327325 15430328.908260064 12789253.358902443 12887322.735015128 18486295.52139006 14993671.379884316 17486233.205623932 16061103.650865922 19293645.49839663 0.8863373984972636 1.047163721185108 0.7997622279077522 0.6628738648673355 0.6679568532595931 0.9581546174322699 0.777130033882417 0.9063208509287215 0.8324556213184623 1.0 24.201622427896925 -8.95230446777422 12.304128546757628 0.999999999999998 0.8362890510970389 0.15437299203267596 0.11401135108661581 0.0 0.0 0.11876448350909422 0.028804618239995434 1.116080530727176e-09 8.95230446777422 -0.16371094890295912 LVGIISS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 8 LVGIISSR 8 0 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 1 LVGIIS(0.069)S(0.931)R;LVGIIS(0.312)S(0.688)R;LVGIIS(0.003)S(0.997)R;LVGIIS(0.004)S(0.996)R;LVGIIS(0.002)S(0.998)R;LVGIIS(0.02)S(0.98)R;LVGIIS(0.006)S(0.994)R;LVGIIS(0.003)S(0.997)R 125.18 0.00087839 7542201000.0 6611000.0 5926000.0 5899080.0 5409020.0 5562270.0 5568330.0 5388150.0 5571640.0 6434190.0 5525800.0 True False 6244274.65129823 5641306.064892661 6279344.135661725 5923091.634518837 5999989.004012887 5533575.987002867 5932836.785276446 5552313.281270552 5265903.2887306 5476845.711007349 1.1401224319225396 1.0300282977763606 1.1465256585631975 1.0814786369852676 1.0955190853658934 1.010358202328304 1.083257973353649 1.01377938584458 0.9614846878281056 1.0 22.384913807897696 -6.904595295871946 0.7601384425909411 0.9816887474346666 1.1002923388398698 0.5557081211714485 0.03934023208482117 0.5111103081512982 0.5658209830608483 0.0328394849234956 0.018445372100687647 1.245674872761442e-07 6.904595295871946 0.11860359140520316 LVGLNLS(ph)PPMS(ph)PVQLPLR ddPTM_KYSE-520_SHP099_60min_R1 4 LVGLNLSPPMSPVQLPLR 18 0 Q8N0Z3 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 2 LVGLNLS(1)PPMS(1)PVQLPLR;LVGLNLS(1)PPMS(1)PVQLPLR;LVGLNLS(1)PPMS(1)PVQLPLR;LVGLNLS(1)PPMS(1)PVQLPLR 144.33 5.947899999999999e-06 540705000.0 594203.0 625670.0 584601.0 524006.0 605828.0 758796.0 609377.0 803270.0 979530.0 768050.0 True False 561241.3750756857 595611.874050184 622285.3158546715 573807.3726918509 653503.2169102037 754060.0727029145 670978.7741064023 800483.6438546268 801672.0439418618 761245.6745338571 0.7372670792768149 0.7824174165782976 0.8174566196855215 0.753774230695258 0.8584655897196017 0.9905607321376996 0.8814221171335666 1.0515444233490019 1.0531055489185661 1.0 19.53800259995656 -6.320584284759739 0.8431034941236089 1.0335936109752766 0.760500084886762 0.833067731070008 0.04740758081394711 0.23855621556185302 0.3639506414938109 0.03190073765925055 0.02825215110260633 4.779865929355957e-07 6.320584284759739 -0.27309352608851456 LVGLNLS(ph)PPMSPVQLPLR ddPTM_KYSE-520_SHP099_60min_R1 3 LVGLNLSPPMSPVQLPLR 18 0 Q8N0Z3 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 LVGLNLS(0.798)PPMS(0.202)PVQLPLR;LVGLNLS(0.999)PPMS(0.001)PVQLPLR;LVGLNLS(0.997)PPMS(0.003)PVQLPLR 283.83 9.486799999999998e-38 1238430000.0 434698.0 629400.0 520040.0 382364.0 461380.0 627610.0 361162.0 515900.0 592520.0 437229.0 True False 410584.43539102055 599162.679251339 553562.6104934192 418703.7595980714 497687.98110689834 623692.8531898911 397671.7795614474 514110.46331196546 484933.3042136867 433355.4912190143 0.9474540964879907 1.3826124080392168 1.2773868606955145 0.9661900404683276 1.148452001166338 1.4392176073169496 0.917657183581106 1.1863480992609328 1.11901963639502 1.0 18.72519146013641 -8.412683039574498 0.49609077942040447 0.9925979101367758 1.1818785819403614 0.07400966792935892 0.16839212125912917 4.7040081484688425 2.2763530950229818 0.25855306350199775 0.09134824515469889 3.866490615518588e-09 8.412683039574498 0.18928067180358565 LVGS(ph)PPWK ddPTM_KYSE-520_SHP099_60min_R1 4 LVGSPPWK 8 0 Q86UA6-6;Q86UA6-5;Q86UA6-7;Q86UA6-3;Q86UA6-4;Q86UA6-9;Q86UA6-2;Q86UA6;Q86UA6-8 Q86UA6-6 RPAIN RPA-interacting protein 1 LVGS(1)PPWK;LVGS(1)PPWK;LVGS(1)PPWK;LVGS(1)PPWK 109.66 0.0010978 4707850000.0 6811970.0 5821280.0 5274390.0 4783710.0 5618740.0 5665420.0 5097610.0 4809520.0 5785710.0 5477390.0 True False 6434096.444774471 5541616.9708805755 5614385.61872238 5238352.360125146 6060902.8717425475 5630060.012299161 5612926.166679303 4792836.897670403 4735170.909880117 5428864.585944939 1.185164290417563 1.0207690545878685 1.0341730816527908 0.9649075376989472 1.1164218181890047 1.0370603140249817 1.033904249741445 0.8828433315649131 0.8722212232257991 1.0 22.372219067996646 -7.190616598792275 5.0095173637883645 0.9083156516209073 1.0532708396765318 0.48906829346221614 0.06436010956516532 0.17402259503325712 8.278229086726675 0.031131428574415348 0.01734434802508992 6.44738198194188e-08 7.190616598792275 0.14495518805562446 LVHDS(ph)LEDLQMTR ddPTM_KYSE-520_SHP099_60min_R1 7 LVHDSLEDLQMTR 13 0 A0A087WYY3;A0A2R8Y635;A0A2R8YDN7;Q9H7F0-2;Q9H7F0 A0A087WYY3 ATP13A3 Probable cation-transporting ATPase 13A3 1 LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(0.994)LEDLQMT(0.006)R;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR;LVHDS(1)LEDLQMTR 252.37 1.3216e-16 2525690000.0 1406020.0 1702060.0 1538300.0 1681290.0 1587981.0 1626120.0 1470080.0 1758060.0 2021080.0 1539910.0 True False 1328025.26776862 1620290.4827558533 1637461.2793670227 1841079.2961017282 1712946.070324057 1615970.7819014138 1618690.0329981898 1751961.7001942873 1654102.8192806945 1526267.5954318517 0.8701129944338891 1.0616031471842906 1.0728533346760265 1.2062624546390908 1.1223104490005145 1.058772908982701 1.0605545435433212 1.14787322055316 1.0837567568304902 1.0 20.54157649660627 -4.200323885044241 2.2126015481347414 1.1017942618475625 0.7860913818722961 0.608477136898644 0.05334433818870846 0.518320716891183 2.548647946833852 0.014123111588988229 0.3401383768424681 6.304869690260078e-05 4.200323885044241 -0.31570287997526636 LVIEEAER ddPTM_KYSE-520_SHP099_60min_R1 1 LVIEEAER 8 0 P50991-2;P50991 P50991-2 CCT4 T-complex protein 1 subunit delta 0 103.56 0.015941999999999998 46301000.0 81635.0 86095.0 77638.0 45024.0 77426.0 78362.0 53609.0 65643.0 72021.0 67455.0 False True 77106.54381466199 81958.86696877045 82642.66970519212 49303.067423040826 83518.98570632163 77872.91369109202 59028.32089342079 65415.2997541914 58943.801901663915 66857.40117919592 1.1532985496698502 1.2258757523209514 1.2361035315101079 0.737436193352704 1.2492107714816518 1.1647613026771941 0.8828988242484765 0.9784301902322033 0.8816346561793298 1.0 16.0287996564498 -5.166162616996895 0.3947797593272963 0.9359091031846782 1.2931227968871821 0.23278299393073543 0.14933449500746385 4.491968627147122 0.9262159920722203 0.1438893570563682 0.7140619997033235 6.8208324742833425e-06 5.166162616996895 0.3572136937025039 LVIGDHK ddPTM_KYSE-520_SHP099_60min_R1 2 LVIGDHK 7 0 E9PM92;O00193;E9PRZ9 E9PM92 C11orf58;SMAP Small acidic protein 0 ; 128.57 0.0036061 302740000.0 378940.0 337960.0 268250.0 245530.0 369070.0 382720.0 267280.0 318270.0 304870.0 297400.0 False True 357919.44280183775 321723.89431169786 285541.824215175 268865.0973787138 398113.7092789521 380331.30251722457 294299.27080142323 317165.99565477675 249513.29314728052 294765.26737369905 1.214252432082077 1.0914579495006143 0.9687091927732764 0.9121328973872983 1.3506126852260019 1.2902853375701355 0.9984190926684553 1.0759951417636948 0.8464813218002081 1.0 18.169207013999408 -7.405420753316635 2.096788866600138 0.9353085240148726 1.1225701126112584 0.22834506272692312 0.1370777970539237 0.56843634161247 4.5916010143394015 0.11681338137468289 0.04214778549000308 3.931689807837579e-08 7.405420753316635 0.18726158859638575 LVIGS(ph)LPAHLS(ph)PHMFGGFK ddPTM_KYSE-520_SHP099_60min_R1 1 LVIGSLPAHLSPHMFGGFK 19 0 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 2 LVIGS(1)LPAHLS(1)PHMFGGFK 106.43 0.00013086 48720000.0 23789.0 30777.0 32184.0 31854.0 29578.0 34739.0 22143.0 28749.0 40631.0 23803.0 True False 22469.37674780421 29298.42672278117 34258.63213622071 34881.39458274569 31905.62032420095 34522.181015222224 24381.430534854542 28649.276429067046 33253.43462415831 23592.12393845378 0.9524100842476688 1.241873211552032 1.4521215735214559 1.4785186223056017 1.3523843977521948 1.463292627034444 1.0334563602013906 1.214357660370307 1.4095142391973094 1.0 14.526017686110693 -6.756976179086049 24.999608277290466 1.1821952121757813 1.333940861502301 0.15775000280990914 0.17720339632338086 239.94540056930254 1344009.3048189518 0.07242657360958367 0.05414298187469804 1.74994266979021e-07 6.756976179086049 0.15174564932651968 LVIIEGDLER ddPTM_KYSE-520_SHP099_60min_R1 2 LVIIEGDLER 10 0 J3KN67;A0A2R2Y2Q3;P06753;P06753-7;A0A494C0P6;P06753-5;P06753-2;A0A087WWU8;P06753-6;P06753-4;P06753-3 J3KN67;P06753-5;P06753-4 TPM3 Tropomyosin alpha-3 chain 0 ; 128.86 0.0028776 116551000.0 85270.0 125378.0 147604.0 78180.0 117346.0 127525.0 103678.0 112323.0 133392.0 119195.0 False True 80539.90311846932 119354.65268378513 157118.7900147503 85610.20369432596 126580.46259259203 126729.06917200312 114158.78403977092 111933.37772938532 109171.37533867547 118139.02503230672 0.6817383425709209 1.0102898060242667 1.3299482535240497 0.724656426366433 1.0714534215766287 1.0727113173428284 0.9663088383246151 0.9474716563707515 0.9240924013789776 1.0 16.850126085408327 -4.261161886061994 22.72535722315558 1.007917086404904 0.6817380704147756 0.3149903940629467 0.14305789678079922 7.7103755510858 630166.0555357357 0.03487865748469179 0.19725506270917928 5.4807262924113856e-05 4.261161886061994 -0.32617901599012844 LVINGNPITIFQER ddPTM_KYSE-520_SHP099_60min_R1 2 LVINGNPITIFQER 14 0 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 140.14 4.506e-05 709275000.0 261616.0 273704.0 237921.0 222050.0 236183.0 328113.0 192379.0 193886.0 192516.0 219679.0 False True 247103.63896143364 260554.8490019201 253257.7683470594 243153.56523823296 254769.25840255446 326065.12505966274 211826.54675810772 193213.45471933243 157559.94733342677 217732.81496767566 1.1348938789870435 1.1966723942856374 1.1631584719311039 1.1167520397618118 1.1701004207398742 1.4975470055263371 0.972873780139917 0.8873878507840752 0.7236389579440192 1.0 17.732199329934673 -6.985832537878067 24.93703729138655 0.8693341562837171 1.2064365869888296 0.6404923212291697 0.11824643502430737 141.26647877434235 248651.3663993858 0.0500740222162928 0.03374381457156813 1.0331597109944685e-07 6.985832537878067 0.3371024307051125 LVINGNPITIFQERDPS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 3 LVINGNPITIFQERDPSK 18 1 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 LVINGNPITIFQERDPS(1)K;LVINGNPITIFQERDPS(1)K;LVINGNPITIFQERDPS(1)K 204.18 2.301e-13 7724990000.0 2735200.0 2630770.0 2741540.0 2110720.0 2427930.0 2386640.0 2141550.0 2286080.0 2689300.0 2286490.0 True False 2583473.003513981 2504383.8603337253 2918264.0550190913 2311322.194188889 2618994.2779679927 2371744.094480841 2358038.7735138778 2278150.122055085 2200990.911736088 2266233.477462303 1.1399853674418925 1.105086428754949 1.287715535067871 1.0198958832684246 1.155659513467565 1.0465576994020438 1.0405100784912846 1.0052583481407777 0.9712110131744798 1.0 21.111865071005646 -6.435802662840219 0.8369131454847772 0.9845807192676423 1.1587689289210867 0.5360317553388203 0.062104608081447306 0.47717127252933034 0.7041703797763701 0.04236757688423151 0.0335579060061759 3.6660411644016455e-07 6.435802662840219 0.1741882096534444 LVINGNPITIFQERDPS(ph)KIK ddPTM_KYSE-520_SHP099_60min_R1 3 LVINGNPITIFQERDPSKIK 20 2 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 LVINGNPITIFQERDPS(1)KIK;LVINGNPITIFQERDPS(1)KIK;LVINGNPITIFQERDPS(1)KIK 192.12 3.9591e-13 7449190000.0 4005950.0 4445590.0 4807960.0 2998730.0 3594460.0 3562320.0 2771200.0 3245970.0 4834010.0 3184310.0 True False 3783731.967836657 4232017.183433364 5117888.794607991 3283728.397598954 3877323.552320218 3540086.239504489 3051339.94030569 3234710.4876850937 3956275.6394754676 3156099.490755694 1.198863337141087 1.3409010697631885 1.621586648202452 1.0404388097450947 1.2285175304761495 1.1216649696479795 0.9668072724713375 1.0249076422209291 1.2535332460410429 1.0 21.58971125393964 -5.288047944439376 24.939361048105738 1.0937293895718625 1.3824954756107375 0.5206982645477006 0.13021971845637695 569.0341795187105 533336.4128988755 0.03730781508336701 0.05535422037956626 5.15171768461814e-06 5.288047944439376 0.288766086038875 LVINGNPITIFQERDPSK ddPTM_KYSE-520_SHP099_60min_R1 4 LVINGNPITIFQERDPSK 18 1 P04406;P04406-2 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;; 195.48 1.3297e-12 2270120000.0 2033300.0 2352990.0 2194290.0 1226780.0 2129970.0 1902470.0 1253350.0 1431160.0 1809370.0 1267480.0 False True 1920508.795716938 2239948.828490006 2335737.444388132 1343372.802355142 2297586.5211284845 1890595.9790445855 1380050.8495172246 1426195.639995254 1480834.018505904 1256251.1132845178 1.5287618656875794 1.7830422634480871 1.8592918403719898 1.0693505368069616 1.8289229731477448 1.504950689437837 1.098546966385588 1.1352791053584899 1.178772303440357 1.0 20.26069344412666 -6.694826227450229 4.315980977454123 1.1121360258441084 1.6112823127960327 0.5623443765530851 0.21420960226261684 0.16670022413633 6.077731006748559 0.08655273669457711 0.06429600081249992 2.0191741263007306e-07 6.694826227450229 0.4991462869519243 LVINSGNGAVEDRKPS(ph)GLNGEASK ddPTM_KYSE-520_SHP099_60min_R1 2 LVINSGNGAVEDRKPSGLNGEASK 24 2 P16070;P16070-14;H0YD13;P16070-8;P16070-7;P16070-5;P16070-3;P16070-6;P16070-17;P16070-4;P16070-16;P16070-10;P16070-11;P16070-13;P16070-12;P16070-18;H0Y2P0;H0YE40;J3KN83 P16070 CD44 CD44 antigen 1 LVINSGNGAVEDRKPS(1)GLNGEASK;LVINSGNGAVEDRKPS(0.999)GLNGEAS(0.001)K 117.94 0.00013881 1151600000.0 391113.0 561500.0 451809.0 908097.0 581670.0 548294.0 421227.0 487255.0 780200.0 440237.0 True False 369417.18222556397 534524.6971713173 480933.331059959 994402.2658506815 627444.1197504222 544871.8937666669 463808.735939357 485564.826131172 638535.3472414736 436336.84267920296 0.8466330277252369 1.2250276504024267 1.1022065615796364 2.2789784601841907 1.4379810696199273 1.248741432011643 1.062960287954303 1.112821056204419 1.4634000267333098 1.0 18.73508276916086 -10.593499077571428 5.84565629325219 0.9986637744275985 1.3177930951529946 0.059340856588999236 0.36719477836366593 0.006761845991924796 0.00047021106685159295 0.37595518195416205 0.09083020356796793 2.5497695034281757e-11 10.593499077571428 0.3191293207253961 LVLAES(ph)PQPK ddPTM_KYSE-520_SHP099_60min_R1 10 LVLAESPQPK 10 0 A0A1B0GVL4;P78312-6;P78312-2;E7EUR8;P78312-4;P78312-5;P78312 A0A1B0GVL4 FAM193A Protein FAM193A 1 LVLAES(1)PQPK;LVLAES(1)PQPK;LVLAES(1)PQPK;LVLAES(1)PQPK;LVLAES(1)PQPK;LVLAES(1)PQPK;LVLAES(1)PQPK;LVLAES(1)PQPK;LVLAES(1)PQPK;LVLAES(1)PQPK 178.1 2.0614e-05 10700390000.0 19935070.0 21695200.0 16637650.0 12957030.0 14801970.0 19580630.0 14889160.0 18196070.0 22181600.0 19529710.0 True False 18829231.927523173 20652930.026840873 17710139.540181205 14188462.235526884 15966800.827311277 19458420.02510407 16394301.596998354 18132952.08016468 18153980.592631977 19356691.96328448 0.9727505073303957 1.0669658878704624 0.9149362697806818 0.7330003629979427 0.8248723933612673 1.0052554466441137 0.846957818417261 0.9367794928265131 0.9378658619492529 1.0 24.206329082942446 -4.875689430684893 6.272043361101236 0.8894675437391519 1.0184065849635318 0.257579102652038 0.08077126148004114 0.2559638968216369 12.93389772136165 0.021853169375090256 0.04652598872829763 1.3314061825328228e-05 4.875689430684893 0.12893904122437982 LVLPAPQIS(ph)DAELQEVVK ddPTM_KYSE-520_SHP099_60min_R1 3 LVLPAPQISDAELQEVVK 18 0 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 LVLPAPQIS(1)DAELQEVVK;LVLPAPQIS(1)DAELQEVVK;LVLPAPQIS(1)DAELQEVVK 205.62 2.0809e-13 463913000.0 198380.0 218578.0 176464.0 145390.0 166729.0 202589.0 153548.0 220066.0 251730.0 224191.0 True False 187375.46593927415 208077.18478773316 187839.151792383 159207.8218869026 179849.62374175744 201324.5669044263 169070.13032406842 219302.6424097903 206022.17759689325 222204.84215795863 0.8432555479869995 0.9364205692683216 0.8453422975312747 0.7164912354777877 0.8093866091986773 0.9060314120486664 0.7608750947195004 0.9869390796348838 0.9271723136007918 1.0 17.761530729872902 -7.276144593507314 24.78841990433653 0.967791790169775 0.833349246398391 0.5159677839588728 0.06219710951685073 671.3299172794945 1131647.0693044537 0.03553585372760526 0.01719140953263765 5.294871277042695e-08 7.276144593507314 -0.13444254377138398 LVLPSNT(ph)PNVR ddPTM_KYSE-520_SHP099_60min_R1 3 LVLPSNTPNVR 11 0 Q03188;H0Y8J2;H0Y9W1 Q03188 CENPC Centromere protein C 1 LVLPS(0.03)NT(0.97)PNVR;LVLPS(0.018)NT(0.982)PNVR;LVLPS(0.006)NT(0.994)PNVR 171.26 5.5488e-05 744260000.0 498124.0 700080.0 618621.0 496690.0 539717.0 533053.0 530977.0 651950.0 662090.0 748030.0 True False 470492.0687344249 666447.1059584959 658498.2994885962 543895.2682647064 582189.6573303394 529726.0185010288 584653.3369961362 649688.5376162732 541871.1459306682 741403.036158533 0.634596900455396 0.8988998877204364 0.888178584890217 0.7336026988543465 0.7852539427770172 0.7144912991531888 0.7885769392386476 0.8762960305403327 0.7308725747041598 1.0 19.49989849766225 -10.62017964955936 3.0251897396350897 1.0149419414910699 0.7893413515712149 0.39041209083380357 0.08088513463854106 79468541.73732975 89016416.9724841 9435597.857165923 0.02058276808715933 2.3978408268464886e-11 10.62017964955936 -0.225600589919855 LVLS(ph)GEKK ddPTM_KYSE-520_SHP099_60min_R1 1 LVLSGEKK 8 1 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-2 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 LVLS(1)GEKK 64.297 0.033320999999999996 0.0 573800.0 416260.0 469320.0 419550.0 473890.0 494360.0 444040.0 467210.0 597040.0 488400.0 True False 541970.1701580584 396262.24478100217 499573.11813855084 459423.9058576931 511182.44693473534 491274.51586646924 488927.89661278145 465589.35755763383 488632.58615361346 484073.15596944996 1.1196038521753153 0.8185999159309103 1.032019875462954 0.9490794938579232 1.0560024670465227 1.0148765941846065 1.0100289400134344 0.9618161053058215 1.0094188866454128 1.0 18.88486556693439 -5.728639527899853 24.995814100619835 1.0071576370846576 0.9720378165083428 0.03126118104300801 0.07349130014499161 658.2377662580734 501620.2580866108 0.02040497722777196 0.02634091192750072 1.8679294620633565e-06 5.728639527899853 -0.0351198205763148 LVNHFVEEFK ddPTM_KYSE-520_SHP099_60min_R1 2 LVNHFVEEFK 10 0 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ; 169.65 8.024800000000001e-05 5218900000.0 6343800.0 5626800.0 3530500.0 3544600.0 6061100.0 5938400.0 4014600.0 4850700.0 4988900.0 4982700.0 False True 5991896.767948218 5356480.08200101 3758081.678999727 3881477.718277154 6538074.087058434 5901336.242862366 4420434.9467202695 4833874.053861887 4083041.5199346174 4938557.154481939 1.2132889385537091 1.08462449951395 0.7609675379759687 0.7859537911299775 1.3238834506805028 1.1949514925643143 0.895086319434118 0.9788028978210674 0.8267681009278375 1.0 22.23565817588687 -6.828087773260469 24.99997477385452 0.9233973441958765 1.0475713962504647 0.12662470062788633 0.1722111626655153 151.2202394914906 56720.34636022265 0.07956062506670332 0.05363977687216862 1.485635357013645e-07 6.828087773260469 0.1241740520545882 LVNHFVEEFKR ddPTM_KYSE-520_SHP099_60min_R1 3 LVNHFVEEFKR 11 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ;; 214.04 2.3313000000000004e-09 4260380000.0 5379700.0 4701880.0 3403120.0 3427400.0 6016370.0 4693940.0 3756010.0 3666900.0 4119890.0 3334970.0 False True 5081277.316833922 4475994.62713423 3622490.5603845213 3753139.0655146167 6489824.090537331 4664643.379331368 4135704.145925079 3654180.379760897 3371821.829975232 3305424.7603674014 1.537253964379795 1.354135989057188 1.0959228610551939 1.135448342529343 1.9633858160534807 1.4112084580660333 1.251186896011934 1.1055100765187984 1.0200873032730748 1.0 21.656404245081443 -7.151049207730472 2.2598534841748443 1.0284826582247137 1.4080557127683437 0.35950530356832844 0.2245675140517427 0.40979792184043845 4.020401673829222 0.15185442102381888 0.07156789911247581 7.062375294955968e-08 7.151049207730472 0.37957305454363 LVNTTIT(ph)PEPEPKPQPNSR ddPTM_KYSE-520_SHP099_60min_R1 1 LVNTTITPEPEPKPQPNSR 19 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 LVNT(0.001)T(0.028)IT(0.971)PEPEPKPQPNSR 118.37 9.3317e-05 1707600000.0 936930.0 1124400.0 670250.0 434840.0 664420.0 823460.0 539050.0 677200.0 1067900.0 740490.0 True False 884956.6251763499 1070382.1362411904 713455.387437917 476167.06286058715 716706.0739673272 818320.480693022 593542.4346210235 674850.9512596686 873996.2795682763 733929.8346925032 1.2057782411136384 1.458425704535709 0.9721029909307822 0.6487909883920828 0.9765321425686527 1.1149846238855738 0.8087182269538092 0.91950336307341 1.1908444625833436 1.0 19.485282619276713 -4.8073311626574595 8.645775750045665 0.9408490736405462 1.3315133970684159 0.49344441478120915 0.15283823051179254 0.19553364689888006 33.91426706857531 0.040439231812086016 0.08526074636611644 1.5583637502349978e-05 4.8073311626574595 0.3906643234278697 LVNTTITPEPEPKPQPNS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 LVNTTITPEPEPKPQPNSR 19 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 LVNTTITPEPEPKPQPNS(1)R;LVNTTITPEPEPKPQPNS(1)R 93.09299999999999 0.0006037999999999999 2463540000.0 1185320.0 1156350.0 1049640.0 1332300.0 998720.0 1114110.0 962010.0 1189700.0 1308070.0 1200060.0 True False 1119567.9367231622 1100797.2102832634 1117301.4738833793 1458921.3914293994 1077313.5820605177 1107156.4262318795 1059259.35911283 1185573.2083780682 1070557.4617612856 1189428.4020325525 0.9412655144353292 0.925484214436252 0.9393600085335786 1.2265735280377736 0.9057405895298553 0.9308306614672369 0.8905616826559014 0.9967587845994795 0.9000604491467208 1.0 20.181837000278968 LVNWSCTLNSAISDIEVDKK ddPTM_KYSE-520_SHP099_60min_R1 1 LVNWSCTLNSAISDIEVDKK 20 1 A0A140T936;P26640-2;P26640 A0A140T936 VARS Valine--tRNA ligase 0 82.406 0.010403 65025000.0 25735.0 23342.0 17174.0 29172.0 25863.0 21291.0 18873.0 25665.0 19158.0 15538.0 False True 24307.428248549386 22220.615282943698 18281.063519371564 31944.498109118365 27898.270959659545 21158.11497150455 20780.86702272995 25575.97410525602 15679.390133878687 15400.34540838108 1.57836903030246 1.44286473411505 1.1870554221090885 2.0742715349575036 1.8115354052044133 1.3738727548273049 1.3493766842022075 1.6607402903662942 1.0181193809682831 1.0 13.910675088480673 -7.768846432173681 24.82122702021999 1.0090591389724266 1.555774476133944 0.4596242581956953 0.23881709574233612 161.1946178251185 540142.4553896515 0.2270106270216176 0.06334401321243507 1.702760503156267e-08 7.768846432173681 0.5467153371615174 LVPIKPAPLPLS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 1 LVPIKPAPLPLSPGK 15 1 A0A1B0GVH1;Q9BRW5;Q02086-2;Q02086 A0A1B0GVH1 SP2 Transcription factor Sp2 1 LVPIKPAPLPLS(1)PGK 62.035 0.031664 37280000.0 260660.0 297170.0 211910.0 194590.0 249310.0 306570.0 224900.0 272330.0 303210.0 282350.0 True False 246200.67018717263 282893.5071387364 225570.05766798815 213083.7750943834 268929.27862014115 304656.5829136327 247635.08681248152 271385.35079229996 248154.70730208556 279848.59866497625 0.8797638128676656 1.0108805564447558 0.8060431917260796 0.7614251995932948 0.9609813302731336 1.0886478773415462 0.8848895009438318 0.9697577621862307 0.8867462924092274 1.0 18.09428699792828 -5.950788116855344 24.998845565359545 0.9663558924556493 0.8696041019581958 0.27188941104990694 0.08054701122742468 168.40608502339308 85546.72245149717 0.02618238210997816 0.029688024697153165 1.1199841669183663e-06 5.950788116855344 -0.09675179049745353 LVPLLDRPFDETTYEETED ddPTM_KYSE-520_SHP099_60min_R1 3 LVPLLDRPFDETTYEETED 19 1 O15270 O15270 SPTLC2 Serine palmitoyltransferase 2 0 ;; 145.17 4.1241999999999996e-05 86838000.0 83089.0 104782.0 214548.0 55233.0 98556.0 93453.0 74089.0 60582.0 178301.0 106847.0 False True 78479.88753618485 99748.1154390115 228378.1073689375 60482.327713593055 106311.79649306757 92869.72516236984 81578.63915895947 60371.85518194506 145926.03300243767 105900.41870570823 0.7410724952304144 0.9419048258553758 2.1565363967406816 0.5711245380593849 1.0038845718684317 0.8769533331161795 0.7703334902354095 0.5700813643590523 1.3779552034440823 1.0 16.692348767860118 LVPLLDTGDIIIDGGNSEYR ddPTM_KYSE-520_SHP099_60min_R1 1 LVPLLDTGDIIIDGGNSEYR 20 0 P52209-2;P52209;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 89.62899999999999 0.01286 28264000.0 13686.0 19054.0 25417.0 17737.0 18099.0 19003.0 14096.0 15393.0 30680.0 18424.0 False True 12926.810297635397 18138.617239362928 27055.420488637876 19422.719147176496 19523.2883307767 18884.395228195055 15520.961243702737 15339.605275753212 25109.285379862093 18260.777693655094 0.7079003158845177 0.9933102271797212 1.4816138141826554 1.0636304473453577 1.0691378351076624 1.0341506558483893 0.8499616776505452 0.8400302294399611 1.3750392125186752 1.0 14.156460587965109 -6.352854895463604 3.965834923469088 0.9965287364660642 1.0828358009298529 0.00188924999537754 0.22314209766977436 1.1514999460730553 33.12495599638388 0.08491016533834476 0.07459131460373843 4.437568852376096e-07 6.352854895463604 0.08630706446378866 LVPLLDTGDIIIDGGNSEYRDTTR ddPTM_KYSE-520_SHP099_60min_R1 1 LVPLLDTGDIIIDGGNSEYRDTTR 24 1 P52209-2;P52209;K7EMN2;K7EM49 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 121.21 0.00019532 42911000.0 9957.9 14298.0 12578.0 12351.0 14918.0 12545.0 8191.9 9684.4 14280.0 12500.0 False True 9405.515436418495 13611.102618264455 13388.798005511555 13524.835326536437 16091.961728190889 12466.70200166852 9020.017197239533 9650.807076755955 11687.111969505571 12389.259724852847 0.7591668626940669 1.0986211380297881 1.0806778050389592 1.0916580673020864 1.2988638615679695 1.0062507590070393 0.7280513442740557 0.778965595288671 0.9433260928464703 1.0 13.596802366609076 -6.570117178870784 7.934990156556433 0.8463206782468317 1.078030433083867 0.3093796775746682 0.14235284862629496 0.27180906382484793 39.71592694751818 0.05511648346797993 0.042706334153157395 2.690808687253873e-07 6.570117178870784 0.23170975483703538 LVPS(ph)QEETK ddPTM_KYSE-520_SHP099_60min_R1 7 LVPSQEETK 9 0 P49321-4;P49321;P49321-3 P49321-4 NASP Nuclear autoantigenic sperm protein 1 LVPS(1)QEETK;LVPS(1)QEETK;LVPS(1)QEETK;LVPS(1)QEETK;LVPS(1)QEETK;LVPS(1)QEETK;LVPS(1)QEETK 163.12 0.00012699 3412550000.0 7836150.0 7234190.0 5823850.0 5484170.0 6159870.0 7624180.0 6305920.0 7756210.0 8191100.0 7353140.0 True False 7401463.138522262 6886648.653659438 6199264.689489462 6005383.867924164 6644616.724134012 7576594.664574025 6943383.933448482 7729305.517823022 6703802.720827525 7287996.900256351 1.0155689196659674 0.9449302391192297 0.8506129701113632 0.8240102116005192 0.9117205749497906 1.0395990514633071 0.9527149954199696 1.060552799844241 0.91984159880635 1.0 22.797090914854678 -6.175871025912159 7.247852738949993 0.9955570643991506 0.902760477090425 0.325346491052546 0.06100876831184591 0.3280692086808787 24.24915030942977 0.020988888343378493 0.02099544211527705 6.670048227686764e-07 6.175871025912159 -0.09279658730872564 LVPS(ph)QEETKLSVEESEAAGDGVDTK ddPTM_KYSE-520_SHP099_60min_R1 1 LVPSQEETKLSVEESEAAGDGVDTK 25 1 P49321-4;P49321;P49321-3 P49321-4 NASP Nuclear autoantigenic sperm protein 1 LVPS(0.897)QEET(0.08)KLS(0.022)VEESEAAGDGVDTK 133.25 1.0192999999999999e-05 440300000.0 772660.0 860350.0 723950.0 534190.0 605930.0 806090.0 530890.0 648320.0 1017500.0 760580.0 True False 729799.0095404761 819017.4945883225 770616.9753609558 584959.2569899206 653613.243729904 801058.893306096 584557.5421870981 646071.1292390248 832747.6490876691 753841.8529222851 0.9681062502849818 1.0864579771120195 1.0222528403983429 0.7759707884648653 0.8670429231226117 1.0626352068418237 0.775437898441228 0.8570380202883607 1.1046715512802903 1.0 19.523902369369083 -5.039127196635259 24.89411788972047 0.9111063958092 1.0340505247499674 0.16172470520194304 0.1081472439125172 761.8692818135843 484727.75984338054 0.029112919294968138 0.050437208169831944 9.13845554202477e-06 5.039127196635259 0.12294412894076734 LVPTGPTHREPS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 4 LVPTGPTHREPSPVR 15 1 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 LVPTGPTHREPS(1)PVR;LVPTGPTHREPS(1)PVR;LVPT(0.002)GPT(0.006)HREPS(0.993)PVR;LVPTGPTHREPS(1)PVR 139.46 8.0042e-06 1899760000.0 768470.0 951870.0 720480.0 923440.0 967970.0 896270.0 810880.0 1057730.0 1406700.0 800500.0 True False 725841.4371930347 906140.7364140006 766923.2936087579 1011203.45995764 1044143.7320040836 890676.0464755232 892851.6638261679 1054060.9815060375 1151278.740021252 793408.1927795769 0.9148398564554356 1.1420864375492312 0.9666188231835199 1.2745059468254958 1.3160233805326556 1.1225949701315587 1.1253370861954513 1.328522935732874 1.4510547666364948 1.0 19.59770376935061 -5.264572874130889 24.95566695263724 1.2394414889974739 1.0212721739596593 0.37512315528456885 0.1314252870572148 288.9711255178855 2301418.19405612 0.03677629614736906 0.0572092976749403 5.437848775669818e-06 5.264572874130889 -0.21816931503781456 LVPTGPTHREPS(ph)PVRYDNLSR ddPTM_KYSE-520_SHP099_60min_R1 2 LVPTGPTHREPSPVRYDNLSR 21 2 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 LVPTGPTHREPS(1)PVRYDNLSR;LVPTGPTHREPS(1)PVRYDNLSR 179.64 5.530099999999999e-10 1587840000.0 273052.0 306033.0 267894.0 319290.0 299150.0 261153.0 208097.0 297287.0 551390.0 212105.0 True False 257905.26124433262 291330.7153151017 285162.8758855556 349635.22560196073 322691.40306933253 259523.04725721307 229133.47559100488 296255.78078430734 451271.47541076125 210225.9147151932 1.2268005188310573 1.385798300413089 1.356459199009239 1.663140465225871 1.5349744274225356 1.2344959830894584 1.0899392489333533 1.4092257901965342 2.1466025062710665 1.0 17.681580996860767 -10.493677724114375 5.856584782608431 0.9995279991787602 1.4357747862490204 0.18771098546284648 0.2793010649745239 0.0017551878097264743 0.00015174180423661903 0.27575298908530965 0.06681028684875581 3.208649476256181e-11 10.493677724114375 0.4362467870702602 LVPVS(ph)PLPPK ddPTM_KYSE-520_SHP099_60min_R1 8 LVPVSPLPPK 10 0 O95396 O95396 MOCS3 Adenylyltransferase and sulfurtransferase MOCS3;Molybdopterin-synthase adenylyltransferase;Molybdopterin-synthase sulfurtransferase 1 LVPVS(1)PLPPK;LVPVS(1)PLPPK;LVPVS(1)PLPPK;LVPVS(1)PLPPK;LVPVS(1)PLPPK;LVPVS(1)PLPPK;LVPVS(1)PLPPK;LVPVS(1)PLPPK 124.42 0.00045274 5518770000.0 5733470.0 7073970.0 5343130.0 4010590.0 4312200.0 6487720.0 4311250.0 5490490.0 6673060.0 6436240.0 True False 5415422.989710919 6734125.862954561 5687556.709110267 4391755.267772146 4651545.606938247 6447227.732982451 4747073.223745273 5471444.771680005 5461400.518153283 6379219.920918945 0.8489161773452092 1.055634693024424 0.8915755812806275 0.6884470706787453 0.729171538934525 1.0106608351658315 0.7441463505872429 0.8576980946742195 0.8561235677491037 1.0 22.604948585002507 -4.9987807916404865 24.98664796885782 0.8300169926298998 0.9576078847400201 0.13488374479498244 0.11044590314340076 66.92167962552405 1371363.3319253079 0.028212859260916285 0.05799593411411246 1.002811275237593e-05 4.9987807916404865 0.1275908921101203 LVQAEYWHDPIKEDVYR ddPTM_KYSE-520_SHP099_60min_R1 1 LVQAEYWHDPIKEDVYR 17 1 Q5T0S4;A0A286YFE3;A0A2C9F2P4;A0A286YFL8;A0A286YFF7;P50897-2;P50897 Q5T0S4 PPT1 Palmitoyl-protein thioesterase 1 0 127.78 5.4921000000000005e-05 225790000.0 114740.0 98362.0 68318.0 61731.0 111340.0 102030.0 74677.0 79990.0 78573.0 75579.0 False True 108375.14347148068 93636.54187562788 72721.88759266479 67597.89567989804 120101.82456205745 101393.1929238931 82226.07993728641 79712.53335980634 64306.12386414297 74909.4288595722 1.4467490290794296 1.2499967400787713 0.9707975177462873 0.9023950216817082 1.6032938228270899 1.3535437990585708 1.0976732994644807 1.0641188242035353 0.8584516641382148 1.0 16.19285970187575 -7.235223370411479 2.264133780931344 0.9464850544620548 1.2380991607299687 0.2843805069700802 0.19943084469061254 0.4833264165167338 4.729990105680031 0.14442166773895526 0.06271901294960316 5.818039019640164e-08 7.235223370411479 0.29161410626791395 LVQAFQFTDK ddPTM_KYSE-520_SHP099_60min_R1 2 LVQAFQFTDK 10 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5 Q06830 PRDX1 Peroxiredoxin-1 0 ; 202.05 7.9749e-06 5077400000.0 4250400.0 5540500.0 3795200.0 2924300.0 4730400.0 5370200.0 3979400.0 4409300.0 5036700.0 4678100.0 False True 4014621.8390376647 5274326.063539955 4039844.664534698 3202224.592777144 5102655.567705738 5336682.589825451 4381676.587201381 4394005.1674383525 4122162.2448745593 4636655.6735067265 0.8658442898783091 1.137528088116786 0.8712841644933583 0.6906323907281399 1.10050345054986 1.1509766878568515 0.945007974656763 0.9476669127158075 0.8890378184492072 1.0 22.144653162853754 -3.9725335856120223 16.11198680455242 0.967863714557318 0.583226869485615 0.05306270220870768 0.13201175523236205 12143175.957372336 193354785.48442146 0.03458401586179189 123865599.94383517 0.00010652864779055959 3.9725335856120223 -0.38463684507170304 LVQS(ph)PNSYFMDVK ddPTM_KYSE-520_SHP099_60min_R1 2 LVQSPNSYFMDVK 13 0 P42677;H0YMV8;Q71UM5;C9JLI6 P42677 RPS27;RPS27L 40S ribosomal protein S27;40S ribosomal protein S27-like 1 LVQS(0.996)PNS(0.004)YFMDVK;LVQS(0.965)PNS(0.035)YFMDVK 102.52 0.0021744 0.0 291660.0 300280.0 296420.0 232976.0 223995.0 264440.0 229976.0 268990.0 357810.0 288020.0 True False 275481.0383902043 285854.09807053074 315527.7074887686 255117.96899321137 241622.13214278818 262789.53187096276 253224.21842946755 268056.93647273805 292840.72365607746 285468.3668761691 0.9650142374958935 1.0013512221987417 1.1052983240894032 0.8936820978973016 0.8464059776108201 0.9205556985056631 0.8870482610751458 0.9390074963682971 1.0258254771293323 1.0 18.12297136195372 -5.283188666368612 24.9836941211812 0.9221080162285177 1.0216342721198475 0.3349410494059164 0.05957969797347278 847.5005164828206 973533.2309295705 0.01732349251106447 0.025718990202855518 5.209683426800141e-06 5.283188666368612 0.0995262558913298 LVRDPLS(ph)PAVR ddPTM_KYSE-520_SHP099_60min_R1 2 LVRDPLSPAVR 11 1 Q6P444;E9PN39 Q6P444 MTFR2 Mitochondrial fission regulator 2 1 LVRDPLS(1)PAVR;LVRDPLS(1)PAVR 120.21 0.00029 0.0 111772.0 118689.0 106087.0 95976.0 108000.0 120141.0 99046.0 121421.0 151339.0 115684.0 True False 105571.78434804204 112987.00228417886 112925.53776520163 105097.53018376336 116498.98556405788 119391.15545495872 109058.5362758073 120999.81889087433 123859.65254572846 114659.12976079005 0.9207446852971354 0.9854165343823933 0.9848804713658201 0.9166084759497585 1.0160463088033744 1.0412703785912292 0.9511544043926803 1.055300342356624 1.080242391549048 1.0 16.806991708868924 -6.219137306202335 0.7740469173726772 1.0392538919465684 0.9527751974894556 0.3903765818592576 0.040785611394838064 0.7283919595555086 0.9571300689738482 0.028402753164897942 0.028785739315012413 6.037577156331731e-07 6.219137306202335 -0.08647869445711276 LVREDENDAS(ph)DDEDDDEKRR ddPTM_KYSE-520_SHP099_60min_R1 1 LVREDENDASDDEDDDEKRR 20 3 Q9Y5B6-2;Q9Y5B6;Q9Y5B6-3;Q9Y5B6-4 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 1 LVREDENDAS(1)DDEDDDEKRR 112.13 5.9462e-05 79071000.0 55952.0 63284.0 51741.0 39227.0 48968.0 46406.0 40167.0 39212.0 68958.0 46131.0 True False 52848.231022453256 60243.74164877939 55076.30764852709 42955.122285972415 52821.50301019251 46116.36294056833 44227.47235214297 39075.9827241496 56436.965489717484 45722.31522937493 1.1558520332430626 1.3176004177950063 1.2045826501179135 0.9394782847386369 1.1552674606524869 1.0086182799190413 0.9673060546095973 0.8546370088241879 1.234341813326609 1.0 15.480610838337375 -5.150104489061585 5.581612949392036 1.0198161632124085 1.241529891017401 0.4306645883983513 0.10718843189386563 0.20076449525790085 8.596318549186217 0.028416843632697135 0.05019320153816711 7.077754766879945e-06 5.150104489061585 0.22171372780499254 LVREIAQDFK ddPTM_KYSE-520_SHP099_60min_R1 1 LVREIAQDFK 10 1 Q71DI3;P68431;K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00 Q71DI3 HIST2H3A;HIST1H3A;H3F3B;H3F3A Histone H3.2;Histone H3.1;Histone H3;Histone H3.3 0 88.155 0.010398000000000001 289840000.0 118400.0 130020.0 122730.0 119040.0 170450.0 108420.0 171300.0 132780.0 261700.0 103280.0 False True 111832.11597545173 123773.6440360013 130641.3721749432 130353.52580931886 183863.44527216358 107743.31056364308 188616.67572689248 132319.41717108485 214181.87692014076 102365.01955062409 1.0924837065082154 1.2091400419729288 1.276230618119847 1.2734186578731927 1.796155034984728 1.0525403212604203 1.8425891633187554 1.2926233761489878 2.092334645764594 1.0 16.643363272366816 -5.547237780383586 23.72262858624125 1.5220935819967079 1.2076959389926896 0.1706752780515015 0.32660273469596457 212.95638496261464 207390.73162984772 0.08952210374026016 0.11557976935195882 2.8363656659033296e-06 5.547237780383586 -0.3143976430040183 LVREIAQDFKTDLR ddPTM_KYSE-520_SHP099_60min_R1 2 LVREIAQDFKTDLR 14 2 Q71DI3;P68431;K7EK07;P84243;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00 Q71DI3 HIST2H3A;HIST1H3A;H3F3B;H3F3A Histone H3.2;Histone H3.1;Histone H3;Histone H3.3 0 ; 127.76 3.4142e-05 1492120000.0 1642960.0 1733380.0 1663560.0 2163990.0 2562200.0 1333090.0 2856610.0 1702040.0 4526700.0 1131760.0 False True 1551821.7336404372 1650105.8229435761 1770795.73939011 2369654.9589726855 2763830.5630761953 1324769.6908253718 3145384.016626962 1696136.0204991233 3704765.3888207856 1121733.486895957 1.3834139318909107 1.4710319716938491 1.578624298976959 2.11249373104654 2.4638923553260614 1.18100217770199 2.8040386182379367 1.5120668503822987 3.3027144434036226 1.0 20.097298515496966 -5.175446080862227 3.7666704539006894 2.0879260093732177 1.447704644040055 0.13528194376476566 0.6690121993159488 0.4408872672434289 11.743718764278297 0.1731092959689197 0.31520629405726885 6.67657787805162e-06 5.175446080862227 -0.6402213653331628 LVRLS(ph)SDSFAR ddPTM_KYSE-520_SHP099_60min_R1 1 LVRLSSDSFAR 11 1 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 LVRLS(0.736)S(0.231)DS(0.033)FAR 172.09 1.7199000000000003e-05 494520000.0 464700.0 518660.0 450750.0 469480.0 487810.0 449500.0 369120.0 473860.0 654290.0 426460.0 True False 438922.1646435162 493742.7950754679 479806.06622549926 514099.2380456912 526197.8717407688 446694.50376644114 406434.25186404295 472216.2902597559 535487.4293086696 422681.8961808598 1.0384219636785847 1.1681190974505378 1.1351469522607536 1.2162792934611875 1.2449027897698648 1.0568101160767638 0.961560586191123 1.1171907160596748 1.2668804463760186 1.0 18.68921279629352 -6.292650460295875 24.84415285727145 1.080379799940729 1.1626753421697689 0.16150182470524255 0.09117734153882388 1261.7720030450027 1004371.7589596686 0.03362035856864039 0.029653389727127402 5.097409684276085e-07 6.292650460295875 0.0822955422290399 LVRLSS(ph)DSFAR ddPTM_KYSE-520_SHP099_60min_R1 2 LVRLSSDSFAR 11 1 A0A087WSV0;Q9HB09-3;Q9HB09 A0A087WSV0 BCL2L12 Bcl-2-like protein 12 1 LVRLS(0.237)S(0.762)DSFAR;LVRLS(0.4)S(0.578)DS(0.022)FAR 154.74 5.9803e-05 1766270000.0 1351610.0 1456000.0 1418000.0 1398180.0 1422380.0 1290930.0 1213190.0 1350320.0 1986640.0 1247620.0 True False 1276633.4989322643 1386051.5744994425 1509406.548880217 1531062.606821855 1534313.2137648591 1282872.827023829 1335831.0847933958 1345636.0550870558 1625916.2551189442 1236567.0574336718 1.0324013495731845 1.1208867049846902 1.2206426977060076 1.2381557454711507 1.240784480341179 1.0374470347659581 1.080273873352031 1.0882030594278826 1.3148629872878177 1.0 20.23790904666127 -6.259179842820804 24.986426323089738 1.1081773650455378 1.1743498895047912 0.10346858114731283 0.09707580427158602 530.469346169495 5866058.4944734145 0.03401850626813081 0.03238712324337024 5.505796522867125e-07 6.259179842820804 0.06617252445925348 LVRPEGHQQQHHHR ddPTM_KYSE-520_SHP099_60min_R1 4 LVRPEGHQQQHHHR 14 1 R4GNH4;R4GMZ8;Q9H4M3-2;B7Z1P2 R4GNH4 FBXO44 0 ;;; 173.25 6.876e-08 4096099000.0 362226.0 375300.0 227616.9 235808.6 115210.7 327146.7 178822.6 344955.0 379693.0 117571.2 False True 342132.60170037125 357270.02466321556 242289.44957391638 258219.7784455593 124277.126630787 325104.8560963936 196899.7335483938 343758.431618102 310750.3224816164 116529.6106370096 2.9360142870992356 3.0659162311638863 2.079209294954648 2.215915568875583 1.0664853847140274 2.7898905206943247 1.689697000376476 2.9499663625317645 2.6667069492715068 1.0 16.830337070442226 -4.76276987166824 24.901446736938365 2.1101987853375324 3.0009655111354214 0.25979513076581184 0.6321523841422116 43.383530543279086 812041.9800260457 0.16036386714285852 0.36604069130552447 1.7267526386812044e-05 4.76276987166824 0.8907667257978891 LVS(ph)FHDDS(ph)DEDLLHI ddPTM_KYSE-520_SHP099_60min_R1 2 LVSFHDDSDEDLLHI 15 0 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 2 LVS(1)FHDDS(1)DEDLLHI;LVS(1)FHDDS(1)DEDLLHI 58.32 0.046808999999999996 47118000.0 84787.8 94092.0 84623.0 99920.0 99568.0 94069.0 99961.0 131847.0 166018.0 116442.0 True False 80084.45171371102 89571.67908502855 90077.93398158722 109416.36675795665 107403.43513557522 93481.88047787617 110066.03340534671 131389.65353032114 135873.3161732056 115410.41447050511 0.6939100953855236 0.7761143523829901 0.7805009140194017 0.9480631991484587 0.9306216915374115 0.8099951889676896 0.953692384784527 1.1384557809026825 1.1773055039840454 1.0 16.81641389102868 -6.015300859636593 0.47775791515729854 1.1129070965001127 0.6960579208961039 0.686101154752621 0.08417770305497027 0.7734946495803747 0.3601890545353043 0.08298932652642557 0.14516580936392093 9.653818742508425e-07 6.015300859636593 -0.4168491756040088 LVS(ph)PETEASEESLQFNLEKPATGER ddPTM_KYSE-520_SHP099_60min_R1 2 LVSPETEASEESLQFNLEKPATGER 25 1 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LVS(0.759)PET(0.218)EAS(0.018)EES(0.005)LQFNLEKPATGER;LVS(0.855)PET(0.145)EASEESLQFNLEKPATGER 132.51 3.1804000000000005e-11 197080000.0 196137.0 192226.0 163064.0 130041.0 133651.0 211816.0 134109.0 185729.0 201296.0 192882.0 True False 185256.8896205841 182991.17442289146 173575.36635162495 142400.05754174787 144168.57332983243 210493.97777484404 147666.04649771072 185084.74944847426 164745.7206592152 191173.21553992547 0.9690525374978286 0.9572009023652938 0.9079481446258076 0.744874521985578 0.7541253774628467 1.101064169373055 0.7724201639892984 0.9681520966509053 0.8617615192270958 1.0 17.544520882093522 -9.728317576819355 4.845136214056416 1.0000000604337596 0.8916348144293442 0.08164230788264581 0.10762251856882936 15043582.273962922 8630084.007490931 10.638018952890437 0.02599769098427521 1.869314708473133e-10 9.728317576819355 -0.10836524600441533 LVS(ph)PGSANETSSILVESVTR ddPTM_KYSE-520_SHP099_60min_R1 15 LVSPGSANETSSILVESVTR 20 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-2 FLNB Filamin-B 1 LVS(0.996)PGS(0.004)ANETSSILVESVTR;LVS(0.987)PGS(0.013)ANETSSILVESVTR;LVS(1)PGSANETSSILVESVTR;LVS(0.998)PGS(0.002)ANETSSILVESVTR;LVS(1)PGSANETSSILVESVTR;LVS(1)PGSANETSSILVESVTR;LVS(0.995)PGS(0.005)ANETSSILVESVTR;LVS(1)PGSANETSSILVESVTR;LVS(0.997)PGS(0.003)ANETSSILVESVTR;LVS(0.999)PGS(0.001)ANETSSILVESVTR;LVS(0.656)PGS(0.344)ANETSSILVESVTR;LVS(0.993)PGS(0.007)ANETSSILVESVTR;LVS(0.999)PGS(0.001)ANETSSILVESVTR;LVS(1)PGSANETSSILVESVTR;LVS(0.968)PGS(0.031)ANETSSILVESVTR 316.54 1.3127999999999999e-53 12350285000.0 1570832.0 2190307.0 1685105.0 1354469.9 1447429.0 2003070.0 1517153.3 1960188.0 2105936.0 2167880.0 True False 1483694.8175840417 2085081.364002166 1793729.5645633275 1483198.312059776 1561333.4275555431 1990568.097128912 1670521.961553328 1953388.565339318 1723551.1087263771 2148674.2697851206 0.69051639815672 0.9704036546268532 0.8348075786948901 0.6902853228693915 0.7266496599839143 0.9264168725434497 0.7774663591612653 0.9091133974134981 0.8021462968878674 1.0 21.03501536200911 -9.242524551424355 0.4139130162933945 1.0359971653850821 0.8013228414658877 0.2819615985683386 0.09177737071408533 8.45291090677223 1.6307515157231813 0.5649710140757289 0.06096638030675908 5.721046116668385e-10 9.242524551424355 -0.2346743239191944 LVSDEMVVELIEK ddPTM_KYSE-520_SHP099_60min_R1 2 LVSDEMVVELIEK 13 0 F8VZG5;A0A5F9ZHP2;F8W1A4;P54819-4;P54819-6;P54819-3;P54819-2;P54819;G3V213;P54819-5 F8VZG5 AK2 Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial;Adenylate kinase 2, mitochondrial, N-terminally processed 0 ; 207.88 3.204700000000001e-10 41659000.0 57047.0 93120.0 108624.0 84150.0 96077.0 81232.0 75709.0 76480.0 127181.0 76352.0 False True 53882.48918962489 88646.3754240304 115626.07684454518 92147.59069938002 103637.71329664811 80725.00095651964 83362.40456863583 76214.70873056611 104088.13637210702 75675.58068095721 0.712019500937688 1.1714000028325797 1.5279179334218311 1.2176661199055427 1.3695000733932554 1.066724565971293 1.1015760145942681 1.0071242010270371 1.3754521000761804 1.0 16.207540219867493 LVSFHDDS(ph)DEDLLHI ddPTM_KYSE-520_SHP099_60min_R1 13 LVSFHDDSDEDLLHI 15 0 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 1 LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI;LVSFHDDS(1)DEDLLHI 317.3 4.2058e-43 2405300000.0 846664.0 1583960.0 2229953.0 2356985.0 862041.0 1238796.0 695000.0 688149.0 948203.0 1159673.0 True False 799697.8601371609 1507864.184027568 2373699.3384309537 2580992.145746619 929878.722357648 1231064.214655955 765257.3825463526 685761.9717341849 776033.2374524566 1149399.1994319428 0.6957529294716651 1.3118716149904976 2.0651652964471228 2.2455141320980556 0.8090128502066241 1.0710501758347952 0.6657890338922794 0.5966264567376616 0.6751642404449112 1.0 20.132448518758935 -5.853708123043603 11.480578138327235 0.7876422888368981 1.5947938485839033 0.456271847303104 0.41504201139100255 0.43685673749167075 51.399622512311545 0.14010373475940108 0.15891645547131492 1.4005282615178928e-06 5.853708123043603 0.8071515597470051 LVSNDNEFDS(ph)DEDEHS(ph)DS(ph)GNDLALEDHEDDDEEELLKR ddPTM_KYSE-520_SHP099_60min_R1 1 LVSNDNEFDSDEDEHSDSGNDLALEDHEDDDEEELLKR 38 1 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 3 LVS(0.013)NDNEFDS(0.987)DEDEHS(1)DS(1)GNDLALEDHEDDDEEELLKR 112.45 5.1819e-05 165700000.0 38527.0 37945.0 45420.0 44934.0 39393.0 32747.0 45029.0 41889.0 51613.0 39687.0 True False 36389.83050832959 36122.06524339384 48347.84587456949 49204.51385010028 42493.00498449012 32542.613826117104 49580.97076069028 41743.69683596609 42241.380257849516 39335.40405601877 0.9251164792029517 0.9183092460916705 1.2291178147227322 1.2508963624735265 1.0802737636551163 0.8273110346031315 1.2604667970381207 1.0612245593439842 1.073876861610275 1.0 15.26354078269383 -4.7314851095314125 24.86939280642902 1.1010597859122804 0.9217124896253205 0.24573912880792514 0.12336649258821798 279.24184008842315 231835.09184919434 0.03236742628030342 0.08561034598576117 1.8557304349761287e-05 4.7314851095314125 -0.1793472962869599 LVSPETEAS(ph)EESLQFNLEKPATGER ddPTM_KYSE-520_SHP099_60min_R1 4 LVSPETEASEESLQFNLEKPATGER 25 1 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 LVSPET(0.007)EAS(0.992)EES(0.001)LQFNLEKPATGER;LVS(0.001)PET(0.011)EAS(0.988)EESLQFNLEKPATGER;LVSPETEAS(1)EESLQFNLEKPATGER;LVSPETEAS(1)EESLQFNLEKPATGER 273.41 2.8170999999999993e-38 1908550000.0 803325.0 956185.0 747815.0 646202.0 680092.0 928745.0 625019.0 867202.0 932217.0 879438.0 True False 758762.9608613142 910248.4373370534 796020.3514463044 707616.8437922848 733611.3712058451 922948.3579545357 688202.0201176109 864193.8786684675 762949.8920781909 871646.8635124109 0.8704935365725786 1.0442857944432824 0.9132372119583383 0.8118159697619441 0.8416382848550222 1.0588558240609036 0.7895422434544354 0.9914495363249394 0.8752970084740375 1.0 19.733384238512734 -10.11336421516728 4.729210030172768 1.0000040003660493 0.912960914553206 0.08326662045151689 0.08857963792136636 5.062754460841442e-06 9.491414693271976e-07 0.08332269228617152 0.02020742585735077 7.702572323596522e-11 10.11336421516728 -0.08704308581284326 LVSPGS(ph)ANETSSILVESVTR ddPTM_KYSE-520_SHP099_60min_R1 2 LVSPGSANETSSILVESVTR 20 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-2 FLNB Filamin-B 1 LVS(0.001)PGS(0.983)ANET(0.005)S(0.005)S(0.005)ILVESVTR;LVS(0.417)PGS(0.471)ANET(0.078)S(0.017)S(0.017)ILVESVTR 87.654 0.01222 73173000.0 74025.6 89109.2 78740.9 62019.4 74907.5 87717.3 62877.1 77633.0 97256.0 89161.0 True False 69919.25240162491 84828.26027636389 83816.66440389442 67913.70512918747 80802.29408462663 87169.82379361967 69233.33088936008 77363.70924267841 79596.76202424604 88371.10290620825 0.7912004049087514 0.9599094894899691 0.9484623553114683 0.7685057999249706 0.9143519932119134 0.9864064261610094 0.7834385745172848 0.8754412550988254 0.9007102933718643 1.0 16.431287069195896 -8.179563047441349 3.9406081312316745 0.999991992599876 0.881680615882502 0.19741005429247394 0.07301003617441737 2.41891573854552 51.03598428187531 0.06981297064994862 0.01834040253976261 6.613585197104443e-09 8.179563047441349 -0.11831137671737402 LVTSGAESGNLNTS(ph)PSSNQTR ddPTM_KYSE-520_SHP099_60min_R1 1 LVTSGAESGNLNTSPSSNQTR 21 0 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 LVTSGAESGNLNT(0.009)S(0.99)PSSNQTR 356.49 4.1314999999999992e-78 386150000.0 341600.0 482780.0 372330.0 280980.0 288990.0 461820.0 312750.0 443300.0 518730.0 427890.0 True False 322650.76703728235 459586.524132446 396330.9875490633 307684.25472028233 311731.86887182493 458937.6100765694 344365.8221458588 441762.2957669983 424541.70811916084 424099.227493383 0.7607907445252692 1.0836768716812073 0.934524191169971 0.7255006252636548 0.7350446514941806 1.0821467720870348 0.8119935143037528 1.041648433028308 1.0010433422111922 1.0 18.694042329470946 -7.2739521999600925 24.783998624105095 1.0160094279809613 0.8831509693888064 0.20858894358512203 0.12264230392186178 1236.9944783349056 2450085.703555693 0.06823076900978924 0.03313609383991609 5.3216682827207225e-08 7.2739521999600925 -0.13285845859215484 LVVSSPTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 LVVSSPTSPK 10 0 Q9Y4G2 Q9Y4G2 PLEKHM1 Pleckstrin homology domain-containing family M member 1 1 LVVS(0.013)S(0.08)PT(0.353)S(0.554)PK 53.751000000000005 0.06388300000000001 570960000.0 1517700.0 1477600.0 1288300.0 1029900.0 1295000.0 1627900.0 1167400.0 1709700.0 1905400.0 1857100.0 True False 1433510.1555400593 1406613.8780771827 1371345.879352882 1127781.3863492752 1396909.132457915 1617739.6722611545 1285412.1847260604 1703769.4497469796 1559427.3912252034 1840647.5388019353 0.7788075257868876 0.7641951261308495 0.745034478597397 0.6127090399302304 0.7589226633618045 0.8788970393072266 0.6983478138148742 0.9256359046642636 0.8472167312598173 1.0 20.811781964233287 -7.675412412407164 0.6519256697283362 0.9961335899736402 0.7319434099627755 0.5661091343993012 0.07096896473641634 0.5177508980743468 0.4992128341030367 0.07025813920908884 0.03189694083511571 2.1114829922955894e-08 7.675412412407164 -0.2641901800108647 LVWVPSDK ddPTM_KYSE-520_SHP099_60min_R1 2 LVWVPSDK 8 0 P35579;Q5BKV1;B1AH99 P35579 MYH9 Myosin-9 0 ; 161.68 0.0015965 875640000.0 1875750.0 1988800.0 1377110.0 1223920.0 1996720.0 2028170.0 1641640.0 1874820.0 1695060.0 1832450.0 False True 1771698.408285079 1893255.0627503418 1465880.7140539056 1340240.9888150336 2153850.5042172745 2015511.438718538 1807592.9920624401 1868316.6870062766 1387279.832985303 1816215.9186245285 0.9754888667790316 1.0424173928528042 0.8071070730202928 0.737930427253405 1.1859000255038212 1.1097311823172114 0.9952522569185394 1.0286864396724402 0.7638297951027371 1.0 20.79250429519732 LVY(ph)DGIR ddPTM_KYSE-520_SHP099_60min_R1 1 LVYDGIR 7 0 P35221;G3XAM7;P35221-2;P35221-3 P35221 CTNNA1 Catenin alpha-1 1 LVY(1)DGIR 75.189 0.049216 306920000.0 762240.0 752010.0 718310.0 557620.0 795790.0 666270.0 639310.0 764260.0 894000.0 705310.0 True False 719957.0277122319 715882.3108099778 764613.4119366367 610616.037145433 858414.1455742742 662111.5617896921 703937.6938643296 761608.9604396252 731672.1359060211 699061.5021228766 1.02989082580846 1.0240619868724292 1.093771305692983 0.8734797085680494 1.2279522516509394 0.9471435056558305 1.006975340119067 1.0894734699691049 1.0466491627476469 1.0 19.415059861231324 LVY(ph)LLR ddPTM_KYSE-520_SHP099_60min_R1 1 LVYLLR 6 0 Q8TC56 REV__A6PWC8 FAM71B Protein FAM71B 1 LVY(1)LLR 92.279 0.040339 16673000.0 51680.0 53694.0 59355.0 56113.0 58239.0 59359.0 44734.0 47370.0 55462.0 40156.0 True False 48813.20737847416 51114.45964366289 63181.11827135782 61445.96264901139 62822.077965418255 58988.51846289696 49256.149281767706 47205.6845262411 45391.49888324357 39800.249080895286 1.2264548214072668 1.2842748682243448 1.5874553484059901 1.543858746313886 1.5784342916480336 1.4821143039331461 1.2375839453078044 1.1860650527662284 1.1404827841902168 1.0 15.280489839128624 -6.996712164909209 2.194676448879216 1.1133581169749827 1.4596179819264588 0.6243568827199295 0.12004867313569667 0.24151122029274924 2.308689376870487 0.07543913855947235 0.04051537515453454 1.0075992489069858e-07 6.996712164909209 0.3462598649514761 LWAPDS(ph)PNR ddPTM_KYSE-520_SHP099_60min_R1 1 LWAPDSPNR 9 0 E5RIM3;Q9Y263 E5RIM3 PLAA Phospholipase A-2-activating protein 1 LWAPDS(1)PNR 120.63 0.00075395 126710000.0 218930.0 193000.0 181240.0 147950.0 184800.0 190600.0 164120.0 157040.0 184860.0 185570.0 True False 206785.5164738651 183727.99030109405 192923.02039425302 162011.12351721057 199342.70863183256 189410.39470052006 180710.85125684552 156495.26489341148 151294.0839413724 183925.9941712755 1.1242865229876229 0.9989234590190821 1.0489165561589915 0.8808495191079007 1.0838202045883776 1.029818517790027 0.9825193663956169 0.8508599646207704 0.8225813030021433 1.0 17.48876586398449 -7.111256014904292 3.980461521887713 0.878466846789321 1.0223998698005463 0.4014990901732688 0.07373076641599925 0.22434548734263307 6.145285159406039 0.03611665695207578 0.020099757722394456 7.740053901298949e-08 7.111256014904292 0.14393302301122535 LWCNSHRPELVR ddPTM_KYSE-520_SHP099_60min_R1 1 LWCNSHRPELVR 12 1 H0Y804;Q04828;A6NHU4 H0Y804 AKR1C1 Aldo-keto reductase family 1 member C1 0 136.7 4.1476999999999996e-05 236210000.0 249090.0 326800.0 215010.0 474140.0 400950.0 196590.0 179080.0 249980.0 241000.0 162450.0 False True 235272.48115139554 311100.03746319946 228869.8886281632 519202.12304461154 432502.48390656523 195363.00888864216 197183.15405237558 249112.87772577076 197240.4751156051 161010.81938418772 1.461221562943619 1.9321685254012901 1.421456579772177 3.224641207531178 2.686170317999386 1.2133532990878502 1.2246577888773866 1.547180982486418 1.225013796401904 1.0 17.296798110276473 -6.282544542106011 24.680090152996968 1.2751534159696614 2.153068940890968 0.4337910767211308 0.5151468048932812 765.4134996863397 895061.067121383 0.1965304155471432 0.17350914989680138 5.217415906393756e-07 6.282544542106011 0.8779155249213066 LWCNSHRPELVRPALER ddPTM_KYSE-520_SHP099_60min_R1 2 LWCNSHRPELVRPALER 17 2 H0Y804;Q04828;A6NHU4 H0Y804 AKR1C1 Aldo-keto reductase family 1 member C1 0 ; 214.54 7.518600000000001e-18 3176100000.0 633120.0 526970.0 397090.0 350060.0 671510.0 471940.0 394240.0 414680.0 406990.0 341790.0 False True 597999.5715065702 501653.57020190393 422687.05676646397 383329.5971506234 724354.016630746 468994.4474027453 434093.62661161774 413241.57186703966 333090.8753829881 338762.00650859607 1.7652498214595267 1.480843661814757 1.247740445048221 1.1315601802615265 2.138238653431655 1.3844363842225755 1.2814117825240907 1.2198580830420063 0.9832592468557595 1.0 18.369912554256665 -7.206332471783828 1.5034181157200648 1.009717092722402 1.517102421634921 0.3887685117153534 0.26479270576098535 0.4955465675950064 2.0364852936554314 0.21613693138923798 0.08685149468024321 6.218240688685556e-08 7.206332471783828 0.507385328912519 LWCTYHEK ddPTM_KYSE-520_SHP099_60min_R1 2 LWCTYHEK 8 0 P15121;E9PCX2 P15121 AKR1B1 Aldose reductase 0 ; 126.41 0.0014588 1486620000.0 1884190.0 1438750.0 992230.0 844020.0 1345930.0 1195460.0 997930.0 931140.0 1005120.0 1087780.0 False True 1779670.2246603547 1369630.2903922212 1056190.7334241308 924235.4070361328 1451847.0337058571 1187998.6907066277 1098810.5032582474 927910.0926697089 822615.5450132658 1078143.1154800348 1.650680878176336 1.2703603730590107 0.9796387123928998 0.8572474226899127 1.3466181000093234 1.1018933142078087 1.0191694288832986 0.8606557694861912 0.7629929025211116 1.0 20.04011726716311 -4.4101390883473535 2.300838138190746 0.9985222439297945 1.710839676769687 0.6469203447479122 0.1516832800634215 0.29255183402638324 2.298497491606604 0.04388652372669807 0.3674254244910931 3.8892056827394434e-05 4.4101390883473535 0.7123174328398925 LWDCETGK ddPTM_KYSE-520_SHP099_60min_R1 1 LWDCETGK 8 0 Q5TFK1;Q13347 Q5TFK1 EIF3I Eukaryotic translation initiation factor 3 subunit I 0 117.1 0.013130000000000001 0.0 399980.0 449410.0 309310.0 287310.0 484020.0 524780.0 352600.0 420930.0 394570.0 438890.0 False True 377792.31205963786 427819.66902183753 329248.61751349794 314615.8560170988 522109.6203029191 521504.653362743 388244.2490443798 419469.89207580045 322926.0343002667 435001.7760512526 0.8684845277852975 0.9834894765382087 0.7568902833047406 0.7232518884705204 1.2002471002357546 1.1988563773157985 0.8925118710288581 0.9642946653771313 0.7423556685943715 1.0 18.73066176573175 -5.7422008086631156 24.999464814744314 1.002523083481918 0.838337781505739 0.24887780264744508 0.14168815188016864 399.09696941245005 518602.308222932 0.04535139142071081 0.05845555932853372 1.8105027605342264e-06 5.7422008086631156 -0.1641853019761791 LWDLRK ddPTM_KYSE-520_SHP099_60min_R1 2 LWDLRK 6 1 Q9UMS4 Q9UMS4 PRPF19 Pre-mRNA-processing factor 19 0 ; 79.027 0.065375 1014320000.0 3403000.0 3268700.0 2321000.0 1608880.0 2938600.0 2722600.0 1728410.0 1796620.0 2393200.0 2137400.0 False True 3214228.806287681 3111666.7455812725 2470615.3737313054 1761787.4714725914 3169851.101653154 2705607.2435028087 1903134.5504560329 1790387.944554259 1958655.2076625153 2118464.298872037 1.5172447361983288 1.4688313356227245 1.1662294120541796 0.8316342514767155 1.4962966821489139 1.277154986724767 0.8983557341369146 0.8451348203071158 0.9245637081094022 1.0 21.014587385411268 -1.0000000000000433 0.26358228209463924 0.9078400248652816 5.3285274166311245 0.4615447725375649 0.19459622322309503 49.48630854739933 0.685978212499379 0.25554352714722617 98.73751637381531 0.09999999999999003 1.0000000000000433 4.420687391765843 LWDWDKK ddPTM_KYSE-520_SHP099_60min_R1 1 LWDWDKK 7 1 P35606-2;P35606;D6RBT6 P35606-2 COPB2 Coatomer subunit beta 0 107.66 0.0084493 3907800000.0 4658200.0 3809300.0 2092100.0 1855800.0 3062900.0 3074200.0 2108200.0 2070000.0 2078500.0 2458100.0 False True 4399800.360108515 3626295.510124128 2226960.1134783556 2032174.6740333864 3303932.8044828973 3055012.777483411 2321317.4300492387 2062819.6531416322 1701096.7947211005 2436323.146372861 1.8059182201091966 1.4884296098088912 0.914065983732002 0.8341154074979088 1.3561143600354133 1.253943994265145 0.9527953767155887 0.84669377960502 0.6982229747534321 1.0 21.216274069871567 -4.595725807531185 3.4247518538194424 0.9934566121196651 1.760954533551307 0.681383907433092 0.18710465135420545 0.1448811040758814 3.272352449343137 0.05453645456668971 0.18933457933964462 2.5367296931028715e-05 4.595725807531185 0.767497921431642 LWEEQLAAAK ddPTM_KYSE-520_SHP099_60min_R1 2 LWEEQLAAAK 10 0 K7ELL7;P14314-2;P14314 K7ELL7 PRKCSH Glucosidase 2 subunit beta 0 ; 161.63 0.00054896 191075000.0 232430.0 288600.0 194981.0 172133.0 256020.0 286240.0 236610.0 226850.0 260590.0 256990.0 False True 219536.64456228228 274735.2228025681 207549.7872406302 188492.46856632634 276167.31744546373 284453.46998466336 260528.84789106878 226063.11029718828 213273.42493931763 254713.2685351944 0.8618971670568796 1.0786058550562208 0.8148369672071186 0.7400182552338527 1.084228234491463 1.116759529727285 1.022831866550646 0.8875199615521896 0.837307872360992 1.0 17.95851458894225 -5.7800857491580535 24.99776172957268 0.9936526555088029 0.884251163878382 0.20902220753348288 0.11128961211694974 466.7187318069075 625691.3371997268 0.03803140989558321 0.043197855204041014 1.6592592630905036e-06 5.7800857491580535 -0.1094014916304209 LWEVQCES(ph)PTFTVAWHPK ddPTM_KYSE-520_SHP099_60min_R1 1 LWEVQCESPTFTVAWHPK 18 0 D6REC9;Q96J01 D6REC9 THOC3 THO complex subunit 3 1 LWEVQCES(0.938)PT(0.056)FT(0.006)VAWHPK 77.681 0.0057518000000000005 170890000.0 198510.0 161240.0 166140.0 160480.0 177890.0 190080.0 163500.0 202560.0 208310.0 177770.0 True False 187498.25458012577 153493.78837382593 176849.65023339892 175731.97094992865 191888.93094435407 188893.64021340405 180028.17560622827 201857.3666378596 170486.15506776655 176195.0961029674 1.0641513795057773 0.8711581182947625 1.0037149395466092 0.9973715207557872 1.0890707811312483 1.0720709281432879 1.0217547456656844 1.1456469056317853 0.9675987518298207 1.0 17.42681424587798 -5.491636835945329 2.734450640712866 1.056026695997802 0.9687532571577016 0.18421193953685122 0.06462395445213913 0.3637198114986816 5.42919962732701 0.018597652917068896 0.027917602047153798 3.2237634274823564e-06 5.491636835945329 -0.08727343884010041 LWGIDR ddPTM_KYSE-520_SHP099_60min_R1 1 LWGIDR 6 0 K7EPB2;P10644-2;P10644;K7EM13;H7BYW5;C9JSK5;P31321 K7EPB2 PRKAR1A;PRKAR1B cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed;cAMP-dependent protein kinase type I-beta regulatory subunit 0 110.23 0.067992 273890000.0 423700.0 356270.0 266600.0 245120.0 355490.0 342760.0 276480.0 276660.0 279410.0 312100.0 False True 400196.5163749903 339154.2544278278 283785.46257508174 268416.1311019846 383465.040538583 340620.7076996337 304429.2965847711 275700.33103292965 228676.18735290976 309335.03681012563 1.293731613792707 1.0963978019599687 0.9174048484823702 0.8677197832806193 1.2396430889073826 1.1011384653097402 0.9841410133299392 0.8912677137254211 0.739250845009434 1.0 18.238810723866198 -7.110164180742855 2.7380783740661303 0.8585771484999811 1.0748263995615033 0.3254335031216684 0.13392926793336832 0.35889961713485646 5.174609532738497 0.07866499341686534 0.040752004209146056 7.759537195284247e-08 7.110164180742855 0.21624925106152215 LWNEWCR ddPTM_KYSE-520_SHP099_60min_R1 1 LWNEWCR 7 0 O95456;O95456-2 O95456 PSMG1 Proteasome assembly chaperone 1 0 110.63 0.042589 0.0 317610.0 269300.0 214190.0 167360.0 301800.0 275940.0 197160.0 200730.0 193050.0 194830.0 False True 299991.540160162 256362.42377245892 227997.0301161171 183265.84408138142 325549.94299289514 274217.75610525435 217090.85689617132 200033.7144807341 157996.9863944715 193103.95777544653 1.553523519745831 1.3275876202940042 1.1806957907162443 0.9490527599361507 1.6858791851975667 1.4200524901935572 1.1242175427011096 1.035886145396077 0.8181965207476501 1.0 17.55901820788382 -7.097723384479258 2.437499446210753 0.933294168971872 1.3383111906181722 0.46098024689870654 0.19516648318986718 0.3038002852270666 3.4987976336006956 0.11973652700532357 0.06066313767430539 7.985031165421627e-08 7.097723384479258 0.40501702164630016 LWPSGDR ddPTM_KYSE-520_SHP099_60min_R1 2 LWPSGDR 7 0 E9PBS1;P22234;P22234-2;D6RF62 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 0 ; 101.72 0.036336 950380000.0 1112290.0 1173570.0 3901100.0 690420.0 1437320.0 983560.0 1391620.0 903370.0 3461500.0 1146550.0 False True 1050589.056404856 1117189.9356355178 4152571.1479806933 756037.3092176575 1550428.9067678868 977421.2372069437 1532298.5305023848 900236.4203181426 2832978.857313974 1136392.459002402 0.9244949208191071 0.9831022080314213 3.654169926141613 0.6652959575966876 1.364342832870391 0.8601088730076462 1.3483885064210428 0.7921879568863277 2.492958163239612 1.0 20.116029732402197 LWS(ph)LER ddPTM_KYSE-520_SHP099_60min_R1 4 LWSLER 6 0 K7EKI8;O60437;K7EQ71;M0QZ12;Q96CP6-2;Q96CP6-3;Q96CP6 K7EKI8 PPL;GRAMD1A Periplakin;GRAM domain-containing protein 1A 1 LWS(1)LER;LWS(1)LER;LWS(1)LER;LWS(1)LER 99.44200000000001 0.015233000000000002 588570000.0 583020.0 509020.0 470782.0 456070.0 507270.0 485220.0 433681.0 485570.0 611460.0 487530.0 True False 550678.7183784436 484565.91514540365 501129.36099783337 499414.7556775544 547189.2630285157 482191.5619967802 477521.7077986841 483885.6710028903 500434.2776522316 483210.86349260056 1.1396240440419572 1.0028042657050567 1.0370821495521017 1.0335337911648628 1.1324026514501053 0.997890565852653 0.9882263497703759 1.0013965073247988 1.0356436815909764 1.0 18.88229336397299 LWSLGQDDMAIPSKPPAAS(ph)PEKPSALLGNSLALPR ddPTM_KYSE-520_SHP099_60min_R1 2 LWSLGQDDMAIPSKPPAASPEKPSALLGNSLALPR 35 2 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 LWSLGQDDMAIPS(0.003)KPPAAS(0.997)PEKPSALLGNSLALPR;LWSLGQDDMAIPS(0.005)KPPAAS(0.995)PEKPSALLGNSLALPR 187.53 1.5175000000000001e-15 1427960000.0 739380.0 1068240.0 701720.0 640070.0 791240.0 1052190.0 614630.0 748180.0 940090.0 679100.0 True False 698365.1174825113 1016920.1469390708 746953.9939916978 700902.0603559366 853506.0864602335 1045622.8919199357 676762.798610742 745584.7382065238 769393.3537403703 673083.7023318054 1.0375605813409565 1.5108375725278915 1.109749042212698 1.04132971564719 1.26805341371865 1.5534812212768188 1.0054660308460759 1.1077147398214346 1.1430871837706267 1.0 19.360426398931008 LWSSPAFS(ph)PTCPFR ddPTM_KYSE-520_SHP099_60min_R1 2 LWSSPAFSPTCPFR 14 0 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 LWS(0.002)S(0.051)PAFS(0.941)PT(0.006)CPFR;LWS(0.001)S(0.034)PAFS(0.949)PT(0.016)CPFR 186.67 1.1326e-10 397230000.0 241780.0 242230.0 225910.0 233950.0 246170.0 300450.0 268420.0 299550.0 348090.0 279420.0 True False 228367.98142351944 230592.9072053572 240472.52006878037 256184.53766036738 265542.17848429765 298574.7801037313 295554.51312675147 298510.9309654959 284885.6306348177 276944.5561854702 0.8245981960034666 0.8326320270795602 0.8683056398759308 0.9250390807061042 0.958827940659948 1.0781030839392103 1.067197410187829 1.0778725354889542 1.0286738781174285 1.0 18.07923765460111 -5.694523789575424 1.2537850208535384 1.0574410744808422 0.8311331296509606 0.9140263709214549 0.02773336294851884 0.11487318700776816 0.3781332554646262 0.010914439684533829 0.01685771699999442 2.020580746554977e-06 5.694523789575424 -0.2263079448298816 LWSWGR ddPTM_KYSE-520_SHP099_60min_R1 3 LWSWGR 6 0 Q9P258 Q9P258 RCC2 Protein RCC2 0 ;; 169.6 0.026364 916485000.0 697018.0 610627.0 426302.0 340503.0 529334.0 559082.0 396583.0 369565.0 375016.0 423498.0 False True 658353.022069065 581291.5623501873 453782.1090273168 372864.30274404044 570989.5743015284 555592.561857062 436673.47991709376 368283.06527211977 306922.5477840405 419746.1371964588 1.5684552250231385 1.3848645903752974 1.0810870400337425 0.8883090747051338 1.360321212519655 1.3236394873528554 1.040327572360034 0.8773947694478671 0.7312099399747135 1.0 18.679157522950742 -1.0000000000000002 0.30193652230668533 0.9307002679930808 6.189516080119913 0.5056335001043839 0.1801033512223666 52.69371626772875 0.75175450697835 0.20584834914918254 150.00997942158747 0.09999999999999995 1.0000000000000002 5.258815812126832 LWT(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 1 LWTPIK 6 0 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 LWT(1)PIK 101.43 0.055344000000000004 788030000.0 2309500.0 2276700.0 1741500.0 1376100.0 1576800.0 2049800.0 1587500.0 1610700.0 2199900.0 1998200.0 True False 2181387.431125891 2167323.914603629 1853759.876498519 1506884.1302604473 1700885.189235244 2037006.437865295 1747979.9925069562 1605112.857640208 1800453.6149660558 1980497.502576076 1.1014340731500611 1.094333071253331 0.9360071770286473 0.7608614140136054 0.8588171340902302 1.0285326970701638 0.8825964133927565 0.8104594201974014 0.9090915856365216 1.0 20.917431451317334 -4.818688279535958 4.084424069572522 0.8863907160924691 1.1014710575550033 0.5347712845323018 0.075032868128734 0.15167026649489077 5.073943526126225 0.020517429226893612 0.0490875966246351 1.5181396407941756e-05 4.818688279535958 0.21508034146253419 LWTLSANDMEDDS(ph)MDLIDS(ph)DELLDPEDLKKPDPASLR ddPTM_KYSE-520_SHP099_60min_R1 2 LWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLR 37 2 Q6FI81-3;Q6FI81 Q6FI81-3 CIAPIN1 Anamorsin 2 LWTLSANDMEDDS(1)MDLIDS(1)DELLDPEDLKKPDPASLR;LWT(0.001)LS(0.013)ANDMEDDS(0.987)MDLIDS(1)DELLDPEDLKKPDPASLR 130.95 1.2471e-05 294020000.0 97646.0 108304.0 98735.0 106502.0 93796.0 84109.0 80370.0 95845.0 128869.0 104929.0 True False 92229.38172752477 103100.91327238185 105099.61608158553 116623.91805900607 101177.21157376285 83584.0445323505 88494.58393561217 95512.53606539122 105469.63812312408 103999.41069352666 0.8868260032675886 0.991360552765125 1.0105789579068003 1.1213901817451857 0.9728633162347383 0.8036972899650584 0.8509142825471839 0.918394973860523 1.0141368823130161 1.0 16.666215827880723 -6.011286735311221 24.87015946240205 0.9059611143689004 1.007916253606092 0.20104101779351669 0.07874535887123182 740.3537047069048 1631360.836273663 0.026418827756531527 0.02796549353963812 9.743461303725736e-07 6.011286735311221 0.10195513923719157 LWTLSANDMEDDS(ph)MDLIDSDELLDPEDLKKPDPASLR ddPTM_KYSE-520_SHP099_60min_R1 4 LWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLR 37 2 Q6FI81-3;Q6FI81 Q6FI81-3 CIAPIN1 Anamorsin 1 LWTLSANDMEDDS(1)MDLIDSDELLDPEDLKKPDPASLR;LWTLSANDMEDDS(1)MDLIDSDELLDPEDLKKPDPASLR;LWTLSANDMEDDS(1)MDLIDSDELLDPEDLKKPDPASLR;LWTLSANDMEDDS(0.999)MDLIDSDELLDPEDLKKPDPASLR 286.85 8.411499999999998e-54 4889178000.0 1079911.0 959682.0 921069.0 955897.0 870050.0 902153.0 858541.0 979720.0 1355194.0 870703.0 True False 1020006.1840807927 913577.4362079503 980442.5815025074 1046745.1634790878 938517.9850926722 896522.3284903361 945330.702832703 976321.5799883679 1109124.931260654 862989.2488166837 1.181945412969406 1.0586197191455542 1.1361005746559112 1.2129295526153623 1.087519904077081 1.038856891577308 1.0954142292374147 1.1313253106305594 1.2852129186794243 1.0 19.718983060752432 -10.933337022656286 2.5656648460852636 0.9118384271834026 1.1307217562783476 0.24755083809167866 0.07073166240328116 15612641.758717356 8401993.620531747 8243225.491715579 0.018298875582691988 1.1659044968023422e-11 10.933337022656286 0.218883329094945 LWTLSANDMEDDSMDLIDS(ph)DELLDPEDLKKPDPASLR ddPTM_KYSE-520_SHP099_60min_R1 11 LWTLSANDMEDDSMDLIDSDELLDPEDLKKPDPASLR 37 2 Q6FI81-3;Q6FI81 Q6FI81-3 CIAPIN1 Anamorsin 1 LWTLSANDMEDDSMDLIDS(1)DELLDPEDLKKPDPASLR;LWTLSANDMEDDS(0.021)MDLIDS(0.979)DELLDPEDLKKPDPASLR;LWT(0.001)LS(0.008)ANDMEDDS(0.188)MDLIDS(0.802)DELLDPEDLKKPDPASLR;LWTLSANDMEDDS(0.081)MDLIDS(0.919)DELLDPEDLKKPDPASLR;LWTLSANDMEDDS(0.011)MDLIDS(0.989)DELLDPEDLKKPDPASLR;LWTLSANDMEDDS(0.011)MDLIDS(0.989)DELLDPEDLKKPDPASLR;LWTLSANDMEDDSMDLIDS(1)DELLDPEDLKKPDPASLR;LWTLSANDMEDDSMDLIDS(1)DELLDPEDLKKPDPASLR;LWTLSANDMEDDS(0.001)MDLIDS(0.999)DELLDPEDLKKPDPASLR;LWTLSANDMEDDSMDLIDS(1)DELLDPEDLKKPDPASLR;LWTLSANDMEDDSMDLIDS(1)DELLDPEDLKKPDPASLR 235.88 2.8850999999999997e-31 7745100000.0 1386061.0 1389542.0 1286829.0 1317475.0 1245731.0 1216803.0 1164764.0 1259718.0 1866662.0 1216439.0 True False 1309173.4332858988 1322786.3165749367 1369780.0563391987 1442687.4278866984 1343762.942460181 1209208.481126844 1282509.7121211821 1255348.3322783906 1527723.235519691 1205662.2968352207 1.0858541705437648 1.097144963433922 1.1361224946112818 1.1965933011869512 1.1145433891293315 1.0029412749332312 1.0637387562733616 1.0412105741164772 1.267123670973089 1.0 20.201394437667552 -6.015817905756218 24.632007011101045 1.07485982185004 1.1307218087946276 0.1055426705185043 0.07517069801174599 1412.3840710823706 2199397.883321095 0.024481305253408605 0.025212102755647715 9.642332298106598e-07 6.015817905756218 0.05586198694458755 LWTLVSEQTR ddPTM_KYSE-520_SHP099_60min_R1 1 LWTLVSEQTR 10 0 P46776;E9PLL6;E9PJD9 P46776 RPL27A 60S ribosomal protein L27a 0 150.61 0.0011511 249460000.0 261000.0 239410.0 218390.0 184160.0 304840.0 288160.0 219370.0 227280.0 266770.0 244530.0 False True 246521.80970939895 227908.38423826385 232467.7688363545 201662.51103027715 328829.1736976612 286361.48655247537 241546.06044488295 226491.61872755064 218331.2927244396 242363.6544414613 1.0171566783704444 0.9403571041354765 0.9591692672405343 0.8320658124049917 1.3567594301854535 1.181536428027582 0.996626581661089 0.9345114854350232 0.9008417257430558 1.0 17.886813838723914 -1.7493445764525568 17.11444382824719 1.015502768019475 1.1840250099419527 0.0 0.14380502795166125 0.0 0.0 0.03534877693825883 0.0 0.017809651594052674 1.7493445764525568 0.16852224192247767 LWVLETK ddPTM_KYSE-520_SHP099_60min_R1 1 LWVLETK 7 0 Q15061;C9IZK7;C9JEE7 Q15061 WDR43 WD repeat-containing protein 43 0 91.626 0.053751 43875000.0 199270.0 227730.0 139040.0 149310.0 194770.0 174880.0 145350.0 153580.0 153970.0 135110.0 False True 188216.09586510345 216789.50897030128 148002.74087186568 163500.37750831156 210097.29091029233 173788.50905155778 160043.39647929865 153047.26682584142 126012.92926784114 133913.03051398927 1.4055099428538538 1.6188828535820066 1.1052153797415891 1.2209444956981348 1.5689084931010089 1.2977714594652752 1.1951293751251464 1.142885544733104 0.941005731736294 1.0 17.03093682451841 -7.191709074424453 1.3136622492803882 0.9762935394028887 1.3752324854396047 0.5449968090338716 0.14443802137274311 0.3863552425626724 1.1990940569048179 0.1233666901148267 0.049619772450812026 6.431183857714695e-08 7.191709074424453 0.3989389460367161 LY(ph)DLNMPAYVK ddPTM_KYSE-520_SHP099_60min_R1 2 LYDLNMPAYVK 11 0 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 LY(1)DLNMPAYVK;LY(1)DLNMPAYVK 175.93 5.013800000000001e-07 163623000.0 516560.0 481610.0 347040.0 390230.0 335710.0 406550.0 354920.0 408840.0 439430.0 466260.0 True False 487905.3870631696 458472.73268865206 369410.75368363276 427317.3418730727 362128.46707138786 404012.5706479351 390798.77728539775 407421.8294639732 359640.5891288397 462129.29914479126 1.0557767879380926 0.9920875684296452 0.7993666585677603 0.924670525465187 0.7836085436295356 0.874241411214554 0.8456481292326702 0.881618694633604 0.7782250331116953 1.0 18.817937034166118 -4.615495242748205 4.89381909306677 0.8565250292429596 1.0416235549608786 0.5141160011958027 0.0644141477505715 0.1315303485046966 5.17090996420418 0.015056026792648487 0.04299935643340239 2.42384451514645e-05 4.615495242748205 0.18509852571791896 LY(ph)EEYTR ddPTM_KYSE-520_SHP099_60min_R1 2 LYEEYTR 7 0 P27986-5;P27986-3;P27986-2;P27986;P27986-4;E5RJY0;H0YBC2;Q5T4P3;F6TDL0;Q92569-3;Q92569-2;Q92569 P27986-5 PIK3R1;PIK3R3 Phosphatidylinositol 3-kinase regulatory subunit alpha;Phosphatidylinositol 3-kinase regulatory subunit gamma 1 LY(1)EEYTR;LY(1)EEYTR 113.89 0.009241899999999999 1539700000.0 2300900.0 2091300.0 1885590.0 1685890.0 1820350.0 2035010.0 1791920.0 2002400.0 2449700.0 2247300.0 True False 2173264.4902695664 1990830.808894705 2007138.1484506724 1846116.4787186908 1963601.1886253047 2022308.7477413674 1973064.7610539035 1995454.141763674 2004896.2319116115 2227390.670372944 0.9756997365467484 0.8937950739289797 0.901116348895637 0.8288247334759581 0.8815701774922711 0.9079272777068611 0.8858189033913583 0.8958707461181763 0.9001098274223808 1.0 21.086923189317513 -8.666041824423225 1.7312781237042048 1.0000085823577338 0.8936496506579908 0.45579681984135056 0.033770663474283376 7.680088503551509 18.78829982228273 0.03323375996543143 0.009353576419014006 2.157536619107616e-09 8.666041824423225 -0.10635893169974298 LY(ph)EWISIDKDEAGAK ddPTM_KYSE-520_SHP099_60min_R1 2 LYEWISIDKDEAGAK 15 1 O15357;A0A0A0MTP6;O15357-2 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 1 LY(1)EWISIDKDEAGAK;LY(1)EWISIDKDEAGAK 137.81 8.804e-05 442970000.0 802320.0 832140.0 724800.0 806310.0 851940.0 642800.0 649540.0 795690.0 866950.0 760870.0 True False 757813.7102147319 792162.7453323961 771521.7677210022 882941.4599740588 918982.8311244772 638788.0467654464 715201.8420995092 792929.9371054419 709533.7340310125 754129.2837479017 1.0048856695346973 1.0504336092022235 1.023063000400492 1.1708091424138594 1.2186011747976153 0.8470537619103878 0.9483809441069184 1.0514509304886124 0.9408648481394909 1.0 19.52445234678132 -6.265136553766017 24.999587741064637 0.9601927135560689 1.0915379725696437 0.43686043844793954 0.07716358939463133 358.63896659111197 2425036.992992906 0.02872011988037896 0.02632348906663669 5.43079545953057e-07 6.265136553766017 0.13134525901357474 LY(ph)SVSYLLK ddPTM_KYSE-520_SHP099_60min_R1 1 LYSVSYLLK 9 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 LY(0.969)S(0.025)VS(0.003)Y(0.003)LLK 76.827 0.034494 6840100.0 49051.0 47364.0 47494.0 48164.0 40763.0 52955.0 42733.0 50602.0 52805.0 45003.0 True False 46330.043249255694 45088.5623451866 50555.53923308682 52741.492078965355 43970.81619025642 52624.48820234011 47052.86867388965 50426.47347259557 43216.94310572422 44604.308431804195 1.0386898682688912 1.0108566622913295 1.1334227793349043 1.1824304407634108 0.9857975100652815 1.179807288858609 1.0548951508984625 1.1305292077264895 0.9688961588049028 1.0 15.444895449627571 -7.769887767441184 24.94796640885615 0.9844480125496291 1.0898832195964545 0.2981473943577597 0.0645033395827499 245.49184541820338 724905.0576879638 0.057444400223764056 0.015798395352948212 1.6986825778184983e-08 7.769887767441184 0.10543520704682541 LYADS(ph)DS(ph)GDDSDKR ddPTM_KYSE-520_SHP099_60min_R1 2 LYADSDSGDDSDKR 14 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 2 LYADS(1)DS(1)GDDSDKR;LYADS(1)DS(0.986)GDDS(0.015)DKR 165.49 9.4237e-06 0.0 1906740.0 1781190.0 1576390.0 1660090.0 1664340.0 1742420.0 1692640.0 1804790.0 2111300.0 1603390.0 True False 1800969.3312080468 1695618.9587793027 1678006.6217131775 1817864.4544757425 1795314.0892007782 1731544.9104621178 1863748.569774473 1798529.6047311523 1727941.1415418163 1589185.2120185448 1.1332658506937017 1.0669737837703437 1.0558911629827048 1.1438971623494627 1.1297072711370209 1.089580306541332 1.1727698921934873 1.1317306448168514 1.0873126231441752 1.0 20.599855843091383 -3.900769141905045 18.454994873263107 1.1046295261907906 3.0752287910483465 0.029617825958012434 0.04776556869999458 951.2214467666021 178713.54826761613 0.011335155115614734 800.6268807077385 0.00012566978095430062 3.900769141905045 1.9705992648575559 LYDAYELK ddPTM_KYSE-520_SHP099_60min_R1 4 LYDAYELK 8 0 P08758;D6RBL5;E9PHT9 P08758 ANXA5 Annexin A5;Annexin 0 ;;; 145.63 0.0059995 1042080000.0 2015200.0 2264220.0 1446490.0 1396630.0 2143210.0 2286220.0 1725930.0 1833050.0 1836080.0 1852330.0 False True 1903412.838798395 2155443.4725364894 1539733.0598658307 1529365.2952878806 2311868.433803188 2271950.8529497483 1900403.8478535628 1826691.577387086 1502694.1558102104 1835919.7972909312 1.0367625217654148 1.1740401055193395 0.8386712002004928 0.8330240229146175 1.2592426081000723 1.2375000565396272 1.0351235662133955 0.9949735168619772 0.8184966238871513 1.0 20.808071604885278 -7.499730078012295 3.889639486655594 0.906674443475579 1.0596977499940015 0.14778863618273153 0.1424691416431126 0.44801152971860325 14.868253554517437 0.10530189442605696 0.04110738979347249 3.164243684643519e-08 7.499730078012295 0.15302330651842244 LYDIDVAK ddPTM_KYSE-520_SHP099_60min_R1 1 LYDIDVAK 8 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 RPL23A 60S ribosomal protein L23a 0 91.064 0.032011000000000005 122030000.0 557000.0 593100.0 435500.0 418310.0 548960.0 652580.0 533910.0 524710.0 546230.0 610990.0 False True 526102.099648028 564606.5857387509 463573.02682463644 458066.05663051276 592160.0288448632 648507.0061577401 587882.8332594577 522889.90347823524 447048.40133774705 605577.1039430267 0.8687615436952256 0.9323446709964609 0.7655061986429557 0.7564124430199859 0.9778441506278847 1.0708908938848394 0.9707811431965339 0.8634571883144202 0.7382187972876296 1.0 19.207951134429724 -5.774421531111401 24.996834081076177 0.9384352906419463 0.833351805362776 0.228261333532065 0.09550839174641639 395.28703426928314 761113.5408223742 0.0326300567059067 0.037227989427517566 1.6810416310467124e-06 5.774421531111401 -0.10508348527917033 LYDSMK ddPTM_KYSE-520_SHP099_60min_R1 1 LYDSMK 6 0 P07355;P07355-2;H0YM50 P07355 ANXA2 Annexin A2;Annexin 0 120.76 0.061222000000000006 2340200000.0 2196400.0 2796800.0 1749500.0 1482400.0 2560100.0 2767400.0 2026200.0 2317300.0 2162400.0 2302500.0 False True 2074561.3135851528 2662437.529917616 1862275.5692989703 1623286.850300189 2761565.30502356 2750127.6300850892 2231028.0698063592 2309261.8271618877 1769762.669667988 2282101.641317891 0.9090573688852501 1.166660363286924 0.8160353314603134 0.711312248722961 1.2100974185482745 1.205085514288013 0.9776199400645288 1.0119013918364792 0.7754968655322327 1.0 21.121931617813047 -3.9706783730967556 17.451970013817526 0.9891293684486858 0.6489615076428468 0.01835180625944366 0.16749123467039975 46626739.19634605 713625298.8919026 0.04374526748785166 474822182.7050698 0.00010698468859695855 3.9706783730967556 -0.34016786080583905 LYEEDDLDRLEQMEDS(ph)EGTVR ddPTM_KYSE-520_SHP099_60min_R1 1 LYEEDDLDRLEQMEDSEGTVR 21 1 Q86W92-4;Q86W92;Q86W92-3;H0YFE4;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 LYEEDDLDRLEQMEDS(0.999)EGT(0.001)VR 193.53 1.8622000000000001e-13 81540000.0 95055.0 90662.0 94455.0 86695.0 92551.0 80707.0 77963.0 80841.0 109410.0 103160.0 True False 89782.10966255527 86306.4614335637 100543.72043334343 94934.4667341979 99834.23715684362 80203.27767625832 85844.26088555592 80560.58143943117 89543.90200165307 102246.08265726549 0.8780982833690544 0.8441053113288234 0.9833503428231234 0.9284900141595005 0.9764113652304264 0.784414185774766 0.8395848393851002 0.7879087329875971 0.8757685348377519 1.0 16.64168604484884 -6.259730681223763 24.991557650045088 0.8431576544982695 0.9215173105508325 0.16659232756305575 0.0685143260862276 230.6815282232881 3373975.073666684 0.022725037901883544 0.021621669894729186 5.498817659973848e-07 6.259730681223763 0.07835965605256301 LYEEGSNKR ddPTM_KYSE-520_SHP099_60min_R1 2 LYEEGSNKR 9 1 P25788-2;P25788 P25788-2 PSMA3 Proteasome subunit alpha type-3 0 ; 125.18 0.0016375 2372100000.0 2774100.0 2813500.0 1582050.0 1535720.0 2470560.0 2409080.0 1830670.0 2117360.0 2197480.0 2151910.0 False True 2620215.142968754 2678335.2368504046 1684031.4743694982 1681674.3670689445 2664979.0164364716 2394044.0381171484 2015731.9892174555 2110015.372355541 1798473.0259628212 2132845.7515606475 1.2285066283164114 1.2557566504237876 0.7895702130063824 0.788465066373613 1.2494944908634162 1.1224646866119488 0.9450903740894073 0.9892958132633826 0.8432269537761187 1.0 21.024348202370128 -4.735176047346797 24.976493967795967 0.9742011808778587 1.242132036219512 0.39560239593371016 0.1362429553035542 245.1284468324665 233114.02158299767 0.03737519472245963 0.09881970068356706 1.8400259699913538e-05 4.735176047346797 0.2679308553416534 LYENFISEFEHR ddPTM_KYSE-520_SHP099_60min_R1 5 LYENFISEFEHR 12 0 J3KNQ3;A0A087WUL9;Q9UNM6;E9PPD2;E9PQG3 J3KNQ3 PSMD13 26S proteasome non-ATPase regulatory subunit 13 0 ;;;; 175.28 2.3494999999999997e-06 560046000.0 586315.0 527609.0 325494.0 414234.0 555445.0 494624.0 425321.0 382329.0 354658.0 423227.0 False True 553790.9381600246 502261.87168274494 346475.8640488138 453602.67481600604 599155.361450261 491536.86814454355 468316.5974129461 381002.7899352594 290261.04740062356 419477.5380456239 1.3201921150299882 1.1973510525088404 0.8259700046468992 1.0813515234435997 1.428337174480829 1.1717835248930115 1.1164283064949483 0.9082793603452018 0.6919584985479096 1.0 18.67823403452314 -7.285558098650757 3.2335453306159305 0.8345642486932792 1.1623040905935835 0.41377715305468077 0.16299762476163607 0.26509337060521393 5.69576460350888 0.10476662517584011 0.047840703702297954 5.1813377294377784e-08 7.285558098650757 0.32773984190030436 LYESLLVGS(ph)LPDMNK ddPTM_KYSE-520_SHP099_60min_R1 1 LYESLLVGSLPDMNK 15 0 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 1 LYESLLVGS(1)LPDMNK 244.36 7.1488e-19 284310000.0 522550.0 514330.0 455610.0 414480.0 417890.0 486970.0 454100.0 492550.0 562880.0 450500.0 True False 493563.1098224007 489620.81477493036 484979.34960177436 453872.05458204437 450775.56553114933 483930.63959765073 500004.85958891996 490841.4590120344 460675.1810500904 446508.9204836962 1.105382417192766 1.0965532653738064 1.0861582542996089 1.016490452397618 1.0095555650776946 1.0838095666116057 1.1198093400850142 1.0992870164392536 1.0317267134350823 1.0 18.76832947264789 -5.016076213235159 22.530435856855043 1.0575825405395383 1.0985648707446 0.21982506948233227 0.037853986767494706 351.60951350306254 492780.42097413674 0.011156736258318365 0.020140573212887092 9.636598985576419e-06 5.016076213235159 0.04098233020506181 LYEVAIDGKEEDLGS(ph)PTGELTSK ddPTM_KYSE-520_SHP099_60min_R1 6 LYEVAIDGKEEDLGSPTGELTSK 23 1 Q8ND04;Q8ND04-2;Q8ND04-3 Q8ND04 SMG8 Protein SMG8 1 LYEVAIDGKEEDLGS(0.978)PT(0.022)GELTSK;LYEVAIDGKEEDLGS(1)PTGELTSK;LYEVAIDGKEEDLGS(0.998)PT(0.002)GELTSK;LYEVAIDGKEEDLGS(0.791)PT(0.209)GELTSK;LYEVAIDGKEEDLGS(0.945)PT(0.054)GELTSK;LYEVAIDGKEEDLGS(0.814)PT(0.182)GELT(0.002)S(0.002)K 281.63 2.9088e-48 1359570000.0 1677181.0 1733531.0 1439191.0 1285761.0 1302145.0 1513128.0 1330512.0 1497671.0 1907600.0 1605906.0 True False 1584144.426552565 1650249.5686769208 1531963.5546470156 1407959.3388618587 1404616.4033084286 1503684.0068856664 1465013.1375057732 1492475.9288600408 1561227.926682691 1591678.9222159619 0.9952663218955572 1.0367980285743912 0.9624827804556151 0.8845749725086981 0.8824747150341717 0.9447156621212351 0.9204200150280043 0.9376739919268335 0.9808686317898359 1.0 20.602117910203 -4.9480058224537276 5.233636036466581 0.9301515067461695 1.0144030983350265 0.4287312998712749 0.036154567415891715 0.16388739955302858 9.727506873428718 0.009657709031526946 0.020548754299930198 1.1271823442841334e-05 4.9480058224537276 0.08425159158885698 LYFHSDTCLPLRPQEMEVDS(ph)EDEKDPEWLR ddPTM_KYSE-520_SHP099_60min_R1 4 LYFHSDTCLPLRPQEMEVDSEDEKDPEWLR 30 2 J3QQW9;Q15022 J3QQW9 SUZ12 Polycomb protein SUZ12 1 LYFHS(0.014)DT(0.036)CLPLRPQEMEVDS(0.95)EDEKDPEWLR;LYFHSDTCLPLRPQEMEVDS(1)EDEKDPEWLR;LYFHSDTCLPLRPQEMEVDS(1)EDEKDPEWLR;LYFHSDTCLPLRPQEMEVDS(1)EDEKDPEWLR 344.74 2.5470999999999996e-79 5435690000.0 1513940.0 1457440.0 1169598.0 1399582.0 1217480.0 1166810.0 1015849.0 1283460.0 1581050.0 977893.0 True False 1429958.7302354337 1387422.3947379603 1244992.158502967 1532597.852480326 1313288.7494863824 1159527.505983807 1118540.930650836 1279007.9768218172 1293971.1750270852 969229.6288092404 1.4753559814223054 1.4314692344295088 1.2845172304859462 1.5812536131022108 1.3549820501255623 1.19633931064237 1.154051524430835 1.319612957347537 1.3350511958830749 1.0 19.886478982283027 -6.098047188232019 4.361777990041788 1.2194219960972945 1.4348224688053486 0.5131033146574416 0.11083520634329361 0.21119194129244676 6.864283003036117 0.036835370796162975 0.03733759112025534 7.979079859297304e-07 6.098047188232019 0.21540047270805407 LYGPS(ph)SVSFADDFVR ddPTM_KYSE-520_SHP099_60min_R1 1 LYGPSSVSFADDFVR 15 0 P50454;E9PR70;E9PPV6;E9PK86;E9PMI5;E9PNX1;E9PQ34;E9PIG2;E9PRS3;E9PJH8 P50454 SERPINH1 Serpin H1 1 LYGPS(0.925)S(0.033)VS(0.042)FADDFVR 86.49700000000001 0.0027058000000000004 41713000.0 39929.0 52337.0 40901.0 33097.0 49562.0 59478.0 41817.0 65653.0 67847.0 70823.0 True False 37714.05877351189 49822.65196056142 43537.54390391382 36242.52892902409 53462.24743079482 59106.775739756136 46044.27045459113 65425.26506652541 55527.69508368662 70195.56331946015 0.5372712603199027 0.7097692447287364 0.6202321321331146 0.5163079718312719 0.7616186109581886 0.842030079176957 0.6559427444871916 0.9320427384958063 0.7910428018218184 1.0 16.09909222803815 -6.984008247096035 0.3341638006917978 1.012408844181852 0.5480407252687869 0.6472219669320887 0.09033338930495213 0.9408079370037272 0.3002920523083138 0.12751903438520235 0.15426328608648854 1.0375087137135687e-07 6.984008247096035 -0.46436811891306506 LYGPSS(ph)VSFADDFVR ddPTM_KYSE-520_SHP099_60min_R1 2 LYGPSSVSFADDFVR 15 0 P50454;E9PR70;E9PPV6;E9PK86;E9PMI5;E9PNX1;E9PQ34;E9PIG2;E9PRS3;E9PJH8 P50454 SERPINH1 Serpin H1 1 LYGPS(0.011)S(0.981)VS(0.007)FADDFVR;LYGPS(0.025)S(0.636)VS(0.339)FADDFVR 158.29 1.0596e-05 27627000.0 163329.0 171264.0 156369.0 115020.0 124054.0 132303.0 104576.0 142704.0 178167.0 171729.0 True False 154268.81478171077 163036.22036749506 166448.79593924602 125951.46621797586 133816.34402929305 131477.2479016939 115147.5626434065 142208.99313136394 145816.36402457274 170207.61466314047 0.9063567166899417 0.9578667833995653 0.9779162716583887 0.7399872588970101 0.7861948144572161 0.7724522088033592 0.6765124044026829 0.8355031201912507 0.856697065599323 1.0 17.376936055473685 -5.255686129870781 24.994265095987057 0.7946959643877719 0.9484286174026713 0.3605296859418373 0.08241068550327722 447.15398493205475 1942597.743336816 0.021896184303129475 0.03663637151202509 5.550266928728762e-06 5.255686129870781 0.15373265301489936 LYHEADK ddPTM_KYSE-520_SHP099_60min_R1 2 LYHEADK 7 0 O75663 O75663 TIPRL TIP41-like protein 0 ; 100.19 0.0059847 0.0 764940.0 738560.0 473470.0 503370.0 754960.0 786800.0 592100.0 705040.0 607490.0 680760.0 False True 722507.2533299143 703078.4689988393 503990.63377878553 551210.1334562905 814371.0568651955 781889.2893513583 651955.2463391311 702594.3807975726 497185.12957667676 674728.9960232653 1.0708110331529335 1.0420160881519258 0.7469526828537356 0.8169355944461059 1.2069602190878947 1.1588197542415948 0.9662475604007555 1.0412986323969193 0.7368664048929259 1.0 19.3639486364517 -7.731758330636963 24.9784029648784 0.8684326385451181 1.0029352401188356 0.12630466908785598 0.1447829400570393 408.1462829582425 343481.20320427686 0.10509746542832894 0.03971104202339997 1.854563334570252e-08 7.731758330636963 0.13450260157371752 LYHS(ph)LGPVTR ddPTM_KYSE-520_SHP099_60min_R1 3 LYHSLGPVTR 10 0 Q86X27 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 LY(0.165)HS(0.835)LGPVTR;LYHS(1)LGPVTR;LYHS(1)LGPVTR 96.866 0.001739 3265260000.0 2777310.0 2905140.0 2745200.0 2566730.0 2712580.0 2542350.0 2567520.0 2739350.0 2958450.0 2784450.0 True False 2623247.077869779 2765572.7136959555 2922159.9844753034 2810671.247484484 2926044.6135310396 2526482.2506131483 2827069.9781804476 2729847.834219095 2421270.056455445 2759781.9392693187 0.9505269385755569 1.002098272455602 1.058837273661185 1.0184396120182737 1.060244859166569 0.9154644483549527 1.0243816505766916 0.9891534528057137 0.8773410761201306 1.0 21.396122848080115 -6.256171555334434 24.99692221399748 0.9645348119042011 1.0194342218671564 0.2519716771364293 0.04870728785626727 702.2755484204589 3332450.3848554394 0.01642538872897165 0.015957293268412883 5.54406667556241e-07 6.256171555334434 0.05489940996295528 LYIGNLS(ph)PAVTADDLR ddPTM_KYSE-520_SHP099_60min_R1 2 LYIGNLSPAVTADDLR 16 0 F8W930;Q9Y6M1-1;Q9Y6M1 F8W930 IGF2BP2 Insulin-like growth factor 2 mRNA-binding protein 2 1 LYIGNLS(1)PAVTADDLR;LYIGNLS(1)PAVTADDLR 187.63 2.5506999999999995e-09 29785000.0 103495.0 102396.0 76221.0 87236.0 73404.0 73013.0 63971.0 86499.0 122343.0 91532.0 True False 97753.92603783241 97476.74246047053 81134.3276179119 95526.88321154019 79180.47718837143 72557.29878420272 70437.81297679537 86198.9551580184 100128.59521605191 90721.09769081834 1.0775214203313794 1.0744660827702475 0.8943270053281477 1.0529731853234425 0.8727901139183978 0.79978418064871 0.7764215245372214 0.9501533529916977 1.1036969102522851 1.0 16.469150475997132 -4.670578758583701 1.1737836512353401 0.9128658596223445 1.1194058260515467 0.21199410640887784 0.10089790164957062 1.2652562737958049 2.3900369490121647 0.034768978177436446 0.27182843867114603 2.1351148514006553e-05 4.670578758583701 0.20653996642920225 LYINHT(ph)PPPLSK ddPTM_KYSE-520_SHP099_60min_R1 1 LYINHTPPPLSK 12 0 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;B7ZBA0;H0Y594 A0A0C4DG98 THOC2 THO complex subunit 2 1 LYINHT(1)PPPLSK 128.85 0.000362 738670000.0 600160.0 708810.0 530850.0 489680.0 517440.0 577570.0 504890.0 484810.0 681750.0 483810.0 True False 566867.9284107009 674757.7036544988 565069.4403900316 536219.0399723396 558159.5841691305 573965.1713912861 555929.2084515521 483128.30726550455 557961.3855189373 479523.8197984847 1.18214759101836 1.40714115919843 1.1783970202512497 1.1182323334796602 1.163987191300928 1.1969481967183393 1.1593359610064335 1.007516805877411 1.1635738674116651 1.0 18.871242955689855 -1.0000000000011773 0.10865573254358911 0.9205246421691721 2.044258202262942 0.4603837502259416 0.0783793176537798 94.16313254376927 0.7172656934147984 0.7528148670272369 15.85092266218513 0.09999999999972892 1.0000000000011773 1.1237335600937701 LYKDDQLLDDGK ddPTM_KYSE-520_SHP099_60min_R1 4 LYKDDQLLDDGK 12 1 B8ZZU8;Q15370;Q15370-2 B8ZZU8 TCEB2 Transcription elongation factor B polypeptide 2 0 ;;; 188.09 1.0345999999999999e-07 2027270000.0 3362240.0 3108870.0 2056290.0 1991330.0 3377660.0 3243180.0 2426260.0 2605000.0 2709270.0 2752570.0 False True 3175729.8447407326 2959515.218690996 2188841.7435803255 2180585.404484806 3643462.6257434813 3222938.1106234626 2671530.0388157037 2595963.8630115716 2217334.8631388205 2728184.3712670575 1.1640451716486524 1.0847929670224234 0.80230711920828 0.7992808064771925 1.335489882617918 1.1813490849691457 0.9792336863123947 0.9515353472265226 0.8127511052740978 1.0 21.379509714611693 -7.159951643074383 3.2027947049000645 0.9087444614272585 1.0518970364928408 0.12850416189413172 0.16048385976534832 0.6149737464027215 11.930190180485512 0.09583810320447504 0.049785463738903364 6.919080077747863e-08 7.159951643074383 0.14315257506558232 LYKS(ph)EPELTTVAEVDESNGEEK ddPTM_KYSE-520_SHP099_60min_R1 6 LYKSEPELTTVAEVDESNGEEK 22 1 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;A0JP02 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 LY(0.176)KS(0.809)EPELT(0.012)T(0.003)VAEVDESNGEEK;LY(0.133)KS(0.852)EPELT(0.014)T(0.001)VAEVDESNGEEK;LY(0.001)KS(0.967)EPELT(0.015)T(0.018)VAEVDESNGEEK;LYKS(0.921)EPELT(0.077)T(0.002)VAEVDESNGEEK;LYKS(0.782)EPELT(0.109)T(0.109)VAEVDESNGEEK;LYKS(0.588)EPELT(0.289)T(0.123)VAEVDESNGEEK 253.49 8.328899999999999e-28 4681760000.0 3430590.0 3129730.0 2821780.0 2585010.0 2580700.0 2663480.0 2722010.0 3032070.0 3598870.0 2965250.0 True False 3240288.3339883806 2979373.0729794963 3003676.453807632 2830688.573188403 2783786.4078255943 2646856.2333522597 2997177.3350575543 3021552.4568604603 2945405.928129867 2938980.1919295895 1.102521324535014 1.0137438425617245 1.0220131670351837 0.9631533349430003 0.947194681838906 0.9006036313618243 1.0198018153670356 1.028095549999831 1.0021863829562114 1.0 21.48688420490367 -4.061288421715728 1.2403321772760791 0.9802896246850019 1.2015227661205399 0.4847094470958181 0.03688037108528489 2.12930516402953 2.0547056265270336 0.012274513371055534 0.6758107681927887 8.683835307436941e-05 4.061288421715728 0.22123314143553796 LYKS(ph)EPELTTVAEVDESNGEEKSEPVSEIETSVVK ddPTM_KYSE-520_SHP099_60min_R1 3 LYKSEPELTTVAEVDESNGEEKSEPVSEIETSVVK 35 2 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;A0JP02 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 LYKS(0.997)EPELT(0.002)T(0.001)VAEVDESNGEEKSEPVSEIETSVVK;LYKS(0.87)EPELT(0.097)T(0.033)VAEVDESNGEEKSEPVSEIETSVVK;LYKS(0.67)EPELT(0.261)T(0.069)VAEVDESNGEEKSEPVSEIETSVVK 334.46 6.369199999999999e-82 1657240000.0 767020.0 915260.0 784000.0 560637.0 612548.0 644000.0 481670.0 573688.0 1084230.0 628621.0 True False 724471.8715835375 871289.5357667308 834537.8944443528 613919.771918339 660752.0426786352 639980.5571203289 530361.9042461901 571698.0102277861 887361.1632140782 623051.906999737 1.1627793181344734 1.3984220672116465 1.3394355832454021 0.9853428984346212 1.060508819980089 1.0271705293417857 0.851232294272416 0.9175768564464525 1.4242170728392503 1.0 19.24899283487969 -5.259888575009024 24.836766822137015 1.0272764087561144 1.3100333125716739 0.37921823951931066 0.15315190371069248 124.70534809009298 1997189.9899492324 0.04223378116746551 0.06843695657187383 5.496818851880001e-06 5.259888575009024 0.2827569038155595 LYKSEPELT(ph)TVAEVDESNGEEK ddPTM_KYSE-520_SHP099_60min_R1 1 LYKSEPELTTVAEVDESNGEEK 22 1 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;A0JP02 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 LYKS(0.136)EPELT(0.729)T(0.135)VAEVDESNGEEK 174.31 2.2643e-09 1308500000.0 784180.0 767060.0 762480.0 650200.0 627250.0 675650.0 689120.0 693270.0 982680.0 818460.0 True False 740679.972175925 730209.2862194665 811630.6808111354 711994.8125102425 676611.0064356973 671433.0177303582 758782.974763083 690865.2081804347 804250.0833469009 811209.0811522446 0.9130568054340076 0.9001492995890459 1.000519717627288 0.8776958111698185 0.8340772091390254 0.8276941584241785 0.9353728803002361 0.8516487601434725 0.9914214498246752 1.0 19.629714277246478 -7.779278659565073 23.431944476624473 0.9957111144797532 0.8932051124713845 0.4199027760071192 0.048506615711729165 138.27041027214005 181607.50830500017 0.04915893212764385 0.012833402551154139 1.6623456850066926e-08 7.779278659565073 -0.10250600200836879 LYLADPMK ddPTM_KYSE-520_SHP099_60min_R1 1 LYLADPMK 8 0 P49458;Q6P2S0;Q659G3;E9PE20;P49458-2 P49458 SRP9;DKFZp564M2223 Signal recognition particle 9 kDa protein 0 92.925 0.047409 0.0 489660.0 642320.0 422990.0 363280.0 580450.0 651100.0 470210.0 530560.0 534960.0 568450.0 False True 462497.5836869904 611461.9830580248 450256.6122079294 397806.02197588485 626128.1126912719 647036.2433867174 517743.41560736805 528719.6111936354 437824.7492441661 563413.9752474085 0.8208841171962351 1.0852801135958994 0.7991576921928694 0.7060634621304854 1.1113109368938252 1.1484206494923885 0.918939604542139 0.9384211865910177 0.7770924550671765 1.0 19.10383582403903 -3.9727360891473906 16.061491239996055 0.9406633580878461 0.4926941215158994 0.06275707567163935 0.14107157271547194 19247951.527202755 307514051.3823843 0.03696985926170305 227306897.88730407 0.00010647898701875014 3.9727360891473906 -0.44796923657194665 LYPLRK ddPTM_KYSE-520_SHP099_60min_R1 2 LYPLRK 6 1 P42766 P42766 RPL35 60S ribosomal protein L35 0 ; 145.21 0.016811000000000003 837130000.0 1490980.0 1212540.0 931120.0 988070.0 953630.0 1096870.0 791670.0 976150.0 1070060.0 818490.0 False True 1408272.3672050564 1154287.7583403538 991141.485044676 1081975.8757259224 1028675.2555875247 1090024.0274667325 871699.7295546355 972763.9634851228 875764.0780174456 811238.8153755851 1.735952891446717 1.422870474714582 1.2217628967689373 1.3337328727607691 1.2680301239176672 1.34365368965004 1.0745291189636412 1.1991092450806304 1.0795391707335735 1.0 19.62976715711603 -1.0000000000000002 0.33599563192611825 1.1033304462613418 7.210938086881663 0.7892600740062128 0.09234669937334107 28.342108296419887 0.40288686032093063 0.08446944565784822 108.14810168529525 0.09999999999999995 1.0000000000000002 6.107607640620321 LYPPGDEEEAELADSSGLYHEGS(ph)PSPGSPWK ddPTM_KYSE-520_SHP099_60min_R1 3 LYPPGDEEEAELADSSGLYHEGSPSPGSPWK 31 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 LYPPGDEEEAELADS(0.002)S(0.002)GLYHEGS(0.98)PS(0.015)PGSPWK;LYPPGDEEEAELADSS(0.002)GLYHEGS(0.659)PS(0.337)PGS(0.002)PWK;LYPPGDEEEAELADSSGLYHEGS(0.999)PS(0.001)PGSPWK 325.38 6.456399999999998e-66 611970000.0 205724.0 244598.0 212526.0 315853.0 184910.0 187152.0 185997.0 185939.0 271822.0 202505.0 True False 194312.0796193734 232847.14493091684 226225.76601362295 345871.57415533304 199461.36500601785 185983.91494749064 204799.39191578983 185294.02100748869 222465.976874996 200710.96324650617 0.9681189132689584 1.160111740607523 1.1271221180667665 1.7232320973446065 0.993774140583673 0.9266255910449283 1.0203697326899996 0.9231883401402297 1.1083897624554324 1.0 17.614759896266342 -5.932674562130628 24.999999999767798 0.98883942183289 1.2462498664455652 0.2983626164170803 0.18710205471995386 68.9667674860887 25608.464910128652 0.059125241789570335 0.0670424887624625 1.1676842916421714e-06 5.932674562130628 0.25741044461267526 LYPPGDEEEAELADSSGLYHEGS(ph)PSPGSPWKTK ddPTM_KYSE-520_SHP099_60min_R1 1 LYPPGDEEEAELADSSGLYHEGSPSPGSPWKTK 33 1 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 LYPPGDEEEAELADSSGLYHEGS(0.25)PS(0.25)PGS(0.25)PWKT(0.25)K 183.7 2.0516999999999998e-15 329220000.0 63324.0 88223.0 71478.0 38083.0 72330.0 67721.0 64571.0 88471.0 93838.0 80529.0 True False 59811.291486735594 83984.6346545772 76085.58624884355 41702.39686992854 78021.95949859545 67298.32811917053 71098.46683223094 88164.11475028662 76799.3846634778 79815.57571061405 0.7493686658803584 1.0522336512246535 0.953267398893491 0.5224844461578301 0.9775279925497037 0.8431728709590833 0.8907843638190548 1.1045978678390007 0.9622104956296751 1.0 16.284382690003998 -7.105707138716825 5.609172006915777 1.0238564530727783 0.8554310272182913 0.2323981683947417 0.1401712854734989 0.3600591880480286 15.871548534120759 0.06795726806448545 0.038852849662420634 7.839581173294248e-08 7.105707138716825 -0.16842542585448694 LYPWGVVEVENPEHNDFLK ddPTM_KYSE-520_SHP099_60min_R1 2 LYPWGVVEVENPEHNDFLK 19 0 B5MCX3;Q15019;Q15019-3;Q15019-2;H7C2Y0 B5MCX3 SEPT2 Septin-2 0 ; 109.38 9.848e-05 128336000.0 100205.0 102101.0 89013.0 87389.0 98611.0 89858.0 92812.0 94025.0 138455.0 90458.0 False True 94646.4288962848 97195.91470327457 94750.92040583566 95694.42428553903 106371.12468016033 89297.16289086732 102194.34271783031 93698.84922059996 113315.06216651922 89656.61249525918 1.0556547505214906 1.084090866230464 1.0568202140232084 1.0673437421093632 1.1864281029554287 0.9959908188098132 1.139841667821591 1.045085762364204 1.2638784693377862 1.0 16.45212237047703 -5.588131253088166 24.999755107705475 1.1058347380882791 1.0664890416849577 0.05784327158364877 0.07752895807775353 185.42984459868438 71040.50098779624 0.021513167159027582 0.027773380432395703 2.581479894250793e-06 5.588131253088166 -0.03934569640332142 LYQTDPSGTYHAWK ddPTM_KYSE-520_SHP099_60min_R1 1 LYQTDPSGTYHAWK 14 0 O14818;H0Y586;O14818-2;Q8TAA3-2;Q8TAA3-5;Q8TAA3;A0A087WYS6 O14818 PSMA7;PSMA8 Proteasome subunit alpha type-7;Proteasome subunit alpha type-7-like 0 145.43 7.2465e-06 755500000.0 1364900.0 1449700.0 927790.0 1185000.0 1241900.0 1413200.0 1194300.0 1289700.0 1123500.0 1387100.0 False True 1289186.2761393073 1380054.2359559357 987596.8279164869 1297622.043716759 1339630.464555588 1404379.6946000755 1315031.4992447637 1285226.331718244 919500.721130218 1374811.3731474697 0.9377186582242669 1.0038135142833908 0.7183507841192058 0.9438546036653779 0.9744103741945783 1.0215071842073233 0.9565177630398511 0.9348383035091342 0.668819547968336 1.0 20.390802260912505 -10.121830510263093 4.532085259630595 1.0000091396751793 0.9127289625473942 0.056588596757405574 0.11189635598456543 1.0403239878375991e-05 2.0158906122425575e-06 0.10907481540162346 0.026451758532644625 7.553869708977176e-11 10.121830510263093 -0.08728017712778513 LYQYS(ph)SYLS(ph)SCCKGMVTAMALSK ddPTM_KYSE-520_SHP099_60min_R1 1 LYQYSSYLSSCCKGMVTAMALSK 23 1 B1AM31;Q5T1B0 B1AM31 AXDND1 Axonemal dynein light chain domain-containing protein 1 2 LY(0.066)QY(0.218)S(0.251)S(0.251)Y(0.218)LS(0.49)S(0.49)CCKGMVT(0.014)AMALS(0.001)K 44.441 0.050552 101360000.0 94295.0 97742.0 90454.0 100600.0 87237.0 87146.0 91985.0 98550.0 108130.0 91123.0 True False 89064.26837757778 93046.32760626693 96284.8095715172 110160.99375350698 94102.05558936785 86602.0894888326 101283.74148708818 98208.15305174283 88496.3177354788 90315.7211126212 0.9861435781099185 1.0302340108677286 1.0660913558056266 1.219732206047929 1.041923315565683 0.9588816700122694 1.1214408769519777 1.0873871330693354 0.9798550755646002 1.0 16.462689516725113 -7.766778970458973 24.8947387618337 0.989927495189424 1.0657935304545463 0.15671196179999847 0.06860871442435387 259.01555710317905 1207535.9642767003 0.06299064519625795 0.01812402731780677 1.7108858306336846e-08 7.766778970458973 0.07586603526512226 LYSGS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 3 LYSGSPTR 8 0 Q6PJI9;H3BMH3;Q6PJI9-4;Q6PJI9-3 Q6PJI9 WDR59 WD repeat-containing protein 59 1 LYS(0.004)GS(0.99)PT(0.006)R;LYSGS(0.999)PT(0.001)R;LY(0.003)S(0.281)GS(0.629)PT(0.087)R 191.48 5.4283e-06 1044770000.0 1483310.0 1366850.0 1323740.0 1190930.0 1281250.0 1231880.0 1075630.0 1085280.0 1377460.0 1132390.0 True False 1401027.837394824 1301184.4743163236 1409070.3984588848 1304115.62913384 1382077.0856847165 1224191.3799773152 1184365.1775371719 1081515.416986255 1127347.9869408365 1122357.9055860883 1.248289721506631 1.1593311436932885 1.2554554936939453 1.1619427480691544 1.2314049545211734 1.090731729944959 1.0552473249775915 0.9636101029835883 1.0044460695914486 1.0 20.098101375642464 -6.6041934973064285 1.60970888316562 0.9895213127151911 1.2106942005349621 0.883765885186395 0.035380783880451176 0.10999992405051652 0.580615606141279 0.01666831733467743 0.01157149990720911 2.487748669798418e-07 6.6041934973064285 0.22117288781977107 LYSGSPT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 LYSGSPTR 8 0 Q6PJI9;H3BMH3;Q6PJI9-4;Q6PJI9-3 Q6PJI9 WDR59 WD repeat-containing protein 59 1 LYSGS(0.488)PT(0.512)R 146.88 0.002292 421150000.0 519310.0 446100.0 489710.0 373860.0 497500.0 437030.0 330710.0 371130.0 529490.0 445980.0 True False 490502.8390811806 424668.6863902484 521277.49016370345 409391.5419948919 536650.4196122106 434302.33366195316 364141.39421856793 369842.63665239344 433347.96335668786 442028.96416719013 1.1096622141160324 0.9607259270675859 1.1792835592704256 0.9261645167669291 1.2140616636362125 0.9825200809639377 0.8237953250521327 0.836693218393957 0.9803610136117261 1.0 18.753781380459174 -6.522055905868698 24.99943181235028 0.8975397773216509 1.0716224718647545 0.3996430086434226 0.096582046892492 28.83572716651749 876143.3758492968 0.034325889283238 0.026918072286451017 3.00568936128383e-07 6.522055905868698 0.17408269454310354 LYSILQGDS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 5 LYSILQGDSPTK 12 0 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYSILQGDS(0.999)PT(0.001)K;LYSILQGDS(0.999)PT(0.001)K;LYSILQGDS(0.997)PT(0.003)K;LYSILQGDS(1)PTK;LYSILQGDS(0.978)PT(0.022)K 258.68 1.7366e-21 5192590000.0 5762820.0 5225640.0 3899420.0 3733890.0 3907600.0 4879580.0 4422070.0 4993970.0 5095580.0 4498050.0 True False 5443144.8867031345 4974592.410554451 4150782.852492593 4088757.782965034 4215105.888797337 4849124.731231698 4869095.990844248 4976647.083671366 4170351.1211185674 4458200.776429942 1.2209286121613214 1.1158296048160548 0.9310443967524665 0.9171318179705777 0.94547242266032 1.0876864848412686 1.0921661528988706 1.1162904797788376 0.9354336716208013 1.0 22.08803015959552 -4.529947374972476 4.630088609356261 1.008451749425977 1.2023092767748171 0.49550111017999954 0.07016834542283797 0.1645048559517817 9.168382724378137 0.02022026146360647 0.06825349052333396 2.951566856991469e-05 4.529947374972476 0.1938575273488401 LYSILQGDS(ph)PTKWR ddPTM_KYSE-520_SHP099_60min_R1 2 LYSILQGDSPTKWR 14 1 O15042-2;O15042;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 1 LYSILQGDS(0.86)PT(0.14)KWR;LYSILQGDS(0.844)PT(0.156)KWR 190.23 6.1636e-11 2005370000.0 719090.0 717500.0 636400.0 570810.0 610010.0 641040.0 476090.0 482350.0 820220.0 537940.0 True False 679200.6442296243 683030.2230105437 677423.3622760022 625059.6107797151 658014.3165178797 637039.0315782856 524217.8233906376 480676.84043133655 671288.7240635747 533174.2701109874 1.273881134752132 1.2810637371311295 1.270547736924716 1.1723364119757702 1.2341449192229499 1.1948045269432777 0.983201652400658 0.901537953681218 1.2590418587225467 1.0 19.02424763506073 -6.6467118628317055 4.657501567116665 1.028486194890634 1.2427500289544813 0.5511259983181565 0.08990981305464311 0.16092183820932393 5.841161124164312 0.03509652500293616 0.026650717667215326 2.2557353067304552e-07 6.6467118628317055 0.2142638340638472 LYSLLGIDLTAPSNNS(ph)SPRDS(ph)PCKENK ddPTM_KYSE-520_SHP099_60min_R1 2 LYSLLGIDLTAPSNNSSPRDSPCKENK 27 2 A3KN83-3;A3KN83-2;A3KN83;A3KN83-4 A3KN83-3 SBNO1 Protein strawberry notch homolog 1 2 LYSLLGIDLTAPS(0.001)NNS(0.627)S(0.375)PRDS(0.998)PCKENK;LYSLLGIDLTAPS(0.003)NNS(0.816)S(0.198)PRDS(0.984)PCKENK 112.57 5.7149e-05 155965000.0 170122.0 193388.0 166750.0 165371.0 189278.0 174295.0 145592.0 164564.0 219590.0 129620.0 True False 160684.99353020077 184097.35019869416 177498.97180943354 181087.81011939593 204173.10175549772 173207.16025355266 160309.86020099095 163993.1658935264 179717.99141342612 128471.66764283401 1.2507426460511395 1.4329801548969219 1.381619582481805 1.4095544445086587 1.589246138869485 1.348212905082609 1.2478226767217715 1.2764928556033555 1.3988920258516668 1.0 16.971090705778106 -9.483327429008018 0.40962546847741543 0.9059369648912368 1.4031843914774027 0.5786045272719655 0.09552789495823846 6.13865124295952 0.9933545225465075 0.9114721084414573 0.0660472104200411 3.2860379216773755e-10 9.483327429008018 0.49724742658616594 LYSLLGIDLTAPSNNSS(ph)PRDS(ph)PCKENK ddPTM_KYSE-520_SHP099_60min_R1 1 LYSLLGIDLTAPSNNSSPRDSPCKENK 27 2 A3KN83-3;A3KN83-2;A3KN83;A3KN83-4 A3KN83-3 SBNO1 Protein strawberry notch homolog 1 2 LYSLLGIDLTAPS(0.007)NNS(0.172)S(0.821)PRDS(1)PCKENK 160.27 3.2710000000000004e-10 255480000.0 96741.0 125820.0 105420.0 97257.0 104870.0 108620.0 56538.0 77412.0 115110.0 73062.0 True False 91374.5838815976 119775.41834032975 112215.54187796384 106500.27603861662 113122.67237132172 107942.06228945691 62253.412797706085 77143.47584009664 94208.92568695989 72414.7275213759 1.2618232092998622 1.6540201481110812 1.5496232012312585 1.4706991199708526 1.56215007973246 1.490609244612483 0.8596788930722645 1.0653009198622596 1.3009636148827686 1.0 16.14399551831227 -6.741911268299507 24.0655823158091 1.0619277166329673 1.509239678507598 0.7105900967502756 0.13795951967776146 81.7293952497999 100719.55329381353 0.0519847861653806 0.04019686264489881 1.8117102094718233e-07 6.741911268299507 0.44731196187463085 LYSLLGIDLTAPSNNSSPRDS(ph)PCKENK ddPTM_KYSE-520_SHP099_60min_R1 2 LYSLLGIDLTAPSNNSSPRDSPCKENK 27 2 A3KN83-3;A3KN83-2;A3KN83;A3KN83-4 A3KN83-3 SBNO1 Protein strawberry notch homolog 1 1 LYSLLGIDLTAPSNNSS(0.001)PRDS(0.999)PCKENK;LYSLLGIDLTAPSNNSSPRDS(1)PCKENK 139.69 1.2289e-07 151605000.0 214160.0 301620.0 294660.0 228510.0 263850.0 316600.0 214455.0 245010.0 337420.0 219160.0 True False 202280.11788262404 287129.7224591501 313654.25507266907 250227.52169596349 284613.4938988582 314623.9819631929 236134.20427910506 244160.1174957639 276153.03366600606 217218.41290390014 0.9312291494004932 1.3218479898671367 1.4439579540222183 1.151962756521322 1.3102641258352918 1.4484222481746338 1.0870818966142317 1.1240304826450558 1.271315032525255 1.0 17.728786875365607 -8.519307163207005 0.6121850075868042 0.9968560426071649 1.2596697574702391 0.16208678638226814 0.15468912992327932 3.1947170154166358 2.069159638812367 0.20592348912007105 0.06598898123294336 3.0247733416899342e-09 8.519307163207005 0.26281371486307425 LYSS(ph)EES(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 LYSSEESR 8 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61;A0A2R8YD28;Q9BVE2;A0A087X209;A0A2R8YEB7;A0A2R8Y644 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 2 LY(0.021)S(0.024)S(0.978)EES(0.978)R 51.995 0.050361 158630000.0 29864.0 33524.0 48123.0 37067.0 31170.0 37771.0 31925.0 37447.0 54860.0 26573.0 True False 28207.38438759196 31913.456719450114 51225.085579522376 40589.83653540006 33622.90166696003 37535.257178558946 35152.29055797458 37317.105097195505 44898.80690805852 26337.583893481155 1.0709936227131904 1.2117078335097036 1.9449424740969181 1.5411374368871589 1.2766129878482162 1.4251594728797177 1.334681673920559 1.4168765536018626 1.704742815045061 1.0 14.684835384036415 -10.092993258791491 5.532605947378946 0.999995787777981 1.4391671483604036 0.2335428299669121 0.23707819270387848 1.2775361951958506e-05 2.094223437187088e-06 0.2380741782604287 0.057740915692757425 8.072475604146942e-11 10.092993258791491 0.43917136058242257 LYTSAPNT(ph)SQGK ddPTM_KYSE-520_SHP099_60min_R1 1 LYTSAPNTSQGK 12 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 LYTSAPNT(0.632)S(0.368)QGK 151.66 7.5895e-05 1091200000.0 2514900.0 2270200.0 1823000.0 1981100.0 2145500.0 2276300.0 2175400.0 2316600.0 2520200.0 2443100.0 True False 2375393.4836711423 2161136.18436033 1940513.4969031322 2169383.148360564 2314338.6437748745 2262092.767349386 2395310.6618580413 2308564.255298504 2062595.2090719852 2421456.0347030386 0.9809773333185686 0.8924944964467902 0.801382915523846 0.8959002836599558 0.9557632311332463 0.9341870077053881 0.9892026233512831 0.953378554974103 0.8517995699744088 1.0 21.207443378131266 -5.697722954246505 5.803901850518517 0.9464526054540355 0.8852327258092186 0.1883570497719268 0.05499024224641876 0.33249556980959083 21.329569994344016 0.01682362749899703 0.021615724192498808 2.0057511309517816e-06 5.697722954246505 -0.0612198796448169 LYTSAPNTS(ph)QGK ddPTM_KYSE-520_SHP099_60min_R1 2 LYTSAPNTSQGK 12 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 LYTSAPNT(0.057)S(0.943)QGK;LYTSAPNT(0.112)S(0.888)QGK 175.15 1.4075e-06 2169780000.0 4422300.0 4049700.0 3253700.0 3274500.0 3484800.0 4055000.0 3854000.0 3987300.0 4375800.0 4094400.0 True False 4176986.2033635117 3855146.333276371 3463438.7081040638 3585707.4954856774 3759033.9342002696 4029691.240874127 4243599.931415313 3973468.9869428114 3581265.0249413485 4058126.8013950014 1.0292892282044148 0.9499817334320715 0.8534574885421248 0.883586854470164 0.926297801465465 0.9929929344467257 1.045704123872264 0.9791386965968909 0.8824921448265911 1.0 21.952382513986436 -6.251805637015213 20.506642233415576 0.982864156320936 0.9230480225671488 0.16415096320305933 0.05732077900795708 107.35304113597176 228512.50124947916 0.020454392524033155 0.020102734119451415 5.600081699723082e-07 6.251805637015213 -0.05981613375378725 LYWDDLKR ddPTM_KYSE-520_SHP099_60min_R1 1 LYWDDLKR 8 1 P02786;G3V0E5 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form 0 97.635 0.0076324 182890000.0 230220.0 297140.0 178860.0 245440.0 441520.0 421220.0 345030.0 377550.0 367040.0 332630.0 False True 217449.23766780816 282864.94838376704 190389.60178611858 268766.5438057731 476265.1120948416 418591.0097363747 379908.9995682992 376240.36717083224 300394.78832544293 329683.1569822243 0.6595703573644572 0.8579902927798596 0.577492655460054 0.8152267961334291 1.444614630769629 1.2696766603668022 1.1523457948104487 1.1412180428468723 0.9111620717149328 1.0 18.330720658203024 -5.594404360867652 7.5312139183789535 1.1649976044524817 0.7113113583707575 0.6645080368787533 0.14961856115496683 0.1392987756173055 12.486176562847493 0.04528084592177306 0.05857625695571725 2.5444600654107693e-06 5.594404360867652 -0.45368624608172414 MAAAGGTVSGPS(ph)SACKPGR ddPTM_KYSE-520_SHP099_60min_R1 1 MAAAGGTVSGPSSACKPGR 19 1 A0A087X2H1;Q9ULT8;G3V4V5;A0A087WVU6 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 MAAAGGTVSGPS(0.551)S(0.449)ACKPGR 105.06 6.9209e-05 0.0 124520.0 68979.0 73034.0 55173.0 92621.0 86421.0 82838.0 79100.0 83817.0 81994.0 True False 117612.62737553408 65665.14530041006 77741.88849853173 60416.62533163265 99909.74575859826 85881.61448275765 91212.07346097092 78825.62056207881 68597.94565462517 81267.59695036676 1.447226592012615 0.808011406323658 0.9566160612084013 0.7434282247638182 1.22939215022707 1.0567756117510014 1.1223670550598122 0.9699514138485065 0.844099594780938 1.0 16.31039261453841 -7.519143024667545 23.859636614027533 0.9170416641463771 1.0349283336334387 0.06722106660541605 0.19254295930609058 281.7178585218244 1799430.6805010543 0.12218586068164657 0.04857051333337335 3.02591674952017e-08 7.519143024667545 0.11788666948706161 MAAT(ph)KTASYDEHFRPEK ddPTM_KYSE-520_SHP099_60min_R1 1 MAATKTASYDEHFRPEK 17 2 F2Z3J0;Q86W67 F2Z3J0 FAM228A Protein FAM228A 1 MAAT(0.53)KT(0.35)AS(0.093)Y(0.027)DEHFRPEK 42.172 0.056636 585290000.0 286030.0 427290.0 314170.0 533700.0 324160.0 279870.0 351720.0 410630.0 419160.0 271440.0 True False 270163.3457133311 406762.3470246343 334421.90088977286 584422.6875372434 349669.5477818979 278123.22751749435 387275.29005640734 409205.6203717623 343051.11016372195 269035.2527771242 1.0041931045264965 1.5119295439010993 1.2430411904673946 2.1722903653128105 1.299716465304914 1.0337798658226358 1.439496445386792 1.521011154291958 1.2751158319311948 1.0 18.0374357017706 -5.956320936267772 24.999996707997646 1.283451999010579 1.5013333067255379 0.10314902794010705 0.31427595799939023 344.2295047502959 197020.49761945585 0.0987033666479925 0.11191903818372506 1.1058063098278834e-06 5.956320936267772 0.21788130771495884 MADFHKEEMDDQDKDK ddPTM_KYSE-520_SHP099_60min_R1 8 MADFHKEEMDDQDKDK 16 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ;;;;;;; 214.22 1.0767e-17 23221500000.0 17722930.0 19632640.0 12067380.0 10638280.0 15928070.0 18924790.0 13554410.0 16893080.0 15820820.0 14303640.0 False True 16739803.743114935 18689458.50520655 12845262.623290675 11649338.93268449 17181518.49067872 18806673.365815606 14924622.041093696 16834481.848354526 12948157.898416888 14176920.877663514 1.1807785264210213 1.318301672590469 0.9060685838720496 0.8217115009112196 1.21193583846187 1.326569678148272 1.05274073050716 1.1874568528401777 0.9133265262711167 1.0 23.757040888121796 -7.766164137453778 24.999930459334593 0.9566632101904264 1.1218006077231872 0.15876901978055535 0.15542707827154276 260.8283050973055 1380029.5729130532 0.1444801700126466 0.0420781670854588 1.713309656099567e-08 7.766164137453778 0.1651373975327608 MADHLEGLS(ph)S(ph)DDEETSTDITNFNLEK ddPTM_KYSE-520_SHP099_60min_R1 11 MADHLEGLSSDDEETSTDITNFNLEK 26 0 Q9Y5B6-2;Q9Y5B6 Q9Y5B6-2 PAXBP1 PAX3- and PAX7-binding protein 1 2 MADHLEGLS(0.95)S(0.95)DDEET(0.055)S(0.018)T(0.024)DIT(0.002)NFNLEK;MADHLEGLS(0.999)S(1)DDEET(0.001)STDITNFNLEK;MADHLEGLS(1)S(1)DDEETSTDITNFNLEK;MADHLEGLS(1)S(1)DDEETSTDITNFNLEK;MADHLEGLS(1)S(1)DDEETSTDITNFNLEK;MADHLEGLS(0.999)S(0.999)DDEET(0.002)STDITNFNLEK;MADHLEGLS(1)S(1)DDEETSTDITNFNLEK;MADHLEGLS(1)S(1)DDEETSTDITNFNLEK;MADHLEGLS(0.933)S(0.933)DDEET(0.081)S(0.029)T(0.022)DIT(0.001)NFNLEK;MADHLEGLS(0.856)S(0.856)DDEET(0.18)S(0.049)T(0.049)DIT(0.01)NFNLEK;MADHLEGLS(0.998)S(0.998)DDEET(0.002)S(0.001)TDITNFNLEK 267.24 2.1976e-38 4676172000.0 3203497.0 3186701.0 3051697.0 2907937.0 3120107.0 3068747.0 2818998.0 2908778.0 3582363.0 3047846.0 True False 3025792.635397057 3033607.1006242805 3248414.2715078383 3184306.4581768573 3365641.6699195937 3049593.8116790988 3103969.8286092174 2898688.128031892 2931896.18322226 3020844.4556283033 1.0016380120994097 1.0042248600295187 1.0753331789247 1.054111360233725 1.1141393472440726 1.009516993169652 1.0275172635340555 0.9595621921649043 0.970555163063653 1.0 21.5265204704139 -6.984031925580415 2.0964531939005937 0.974364884457136 1.0476714847370479 0.4254242723616014 0.034160804607068516 0.31867862864998214 2.782893878230374 0.020654365366264204 0.011067407874896623 1.0374521484906625e-07 6.984031925580415 0.07330660027991187 MAEDEVEVYIPQFK ddPTM_KYSE-520_SHP099_60min_R1 2 MAEDEVEVYIPQFK 14 0 P05120 P05120 SERPINB2 Plasminogen activator inhibitor 2 0 ; 134.75 0.0015956 19522000.0 132799.0 172022.0 149795.0 112622.0 155598.0 168904.0 137854.0 142928.0 197121.0 170634.0 False True 125432.37474175682 163757.804909714 159451.0253804742 123325.56101896112 167842.67736848426 167849.80748424234 151789.62764538865 142432.21612764592 161328.79541602978 169122.31551124319 0.7416666118991146 0.9682802911885833 0.9428148195491917 0.729209274637459 0.9924336528926376 0.9924758124133166 0.8975138921587065 0.8421846383612048 0.9539178489151227 1.0 17.36770750883461 MAETVDTSEMVNGATEQRTSS(ph)KES(ph)S(ph)PIPSPTS(ph)DRK ddPTM_KYSE-520_SHP099_60min_R1 1 MAETVDTSEMVNGATEQRTSSKESSPIPSPTSDRK 35 3 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 4 MAET(0.006)VDT(0.104)S(0.108)EMVNGAT(0.42)EQRT(0.466)S(0.472)S(0.475)KES(0.474)S(0.474)PIPS(0.329)PT(0.329)S(0.344)DRK 53.309 0.029651 404720000.0 110790.0 135310.0 126140.0 97050.0 117290.0 92387.0 95909.0 97158.0 177870.0 106230.0 True False 104644.25784561057 128809.50449554932 134271.1862311358 106273.60282085344 126520.05571118837 91810.37846378243 105604.4177016376 96820.98157484773 145573.29173781187 105288.88484568935 0.9938775398654517 1.2233912884948077 1.2752645868357586 1.0093525349480839 1.2016468395179156 0.8719854768937774 1.0029968296882497 0.9195745753860712 1.382608353684846 1.0 16.683993616171698 -6.217024133383236 24.98447460224903 1.0283788490219292 1.1454781530267637 0.10592052376006278 0.15192375771404648 986.6104103860968 554988.654812872 0.04931500207373203 0.04931479885486449 6.067026146919445e-07 6.217024133383236 0.11709930400483448 MAFTHHPLPVLAGVRPGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 MAFTHHPLPVLAGVRPGSPR 20 1 K7EN08;Q14938-6;Q14938-5;Q14938-3;Q14938-4;Q14938 K7EN08 NFIX Nuclear factor 1;Nuclear factor 1 X-type 1 MAFTHHPLPVLAGVRPGS(1)PR 90.475 0.0010395 884550000.0 251390.0 306190.0 292660.0 321860.0 354800.0 307500.0 304610.0 262510.0 394220.0 203920.0 True False 237444.89556645916 291480.1727994404 311525.33187255595 352449.47762926214 382720.7414641454 305580.77843866684 335402.95150711434 261599.41408029487 322639.58547748515 202113.4274473594 1.1748100982964225 1.442161347124533 1.5413391173809714 1.743820200768491 1.8935938413286537 1.5119271505019407 1.6594788171333659 1.2943198152850515 1.5963292966347666 1.0 17.62480564508183 -8.904226466382324 0.7922537890201428 0.9889961827120234 1.5649379138181907 0.3973191570888559 0.1979711298511151 4.781603472015407 3.3401146222327127 0.3715118881987823 0.07191348771090532 1.246733225549565e-09 8.904226466382324 0.5759417311061673 MAGFDGSAWDEEEEEPPDHQY(ph)Y(ph)NDFPGKEPPLGGVVDMR ddPTM_KYSE-520_SHP099_60min_R1 1 MAGFDGSAWDEEEEEPPDHQYYNDFPGKEPPLGGVVDMR 39 1 P29353;P29353-6;P29353-2;P29353-7;Q5T188;X6R6D0;P29353-5;P29353-3 P29353 SHC1 SHC-transforming protein 1 2 MAGFDGS(0.077)AWDEEEEEPPDHQY(0.961)Y(0.961)NDFPGKEPPLGGVVDMR 43.382 0.051812000000000004 446690000.0 85386.0 79038.0 69994.0 73954.0 69067.0 86184.0 80091.0 71747.0 99717.0 75212.0 True False 80649.4683672289 75240.89584154323 74505.92523435972 80982.56592491904 74502.17996252587 85646.09368766847 88187.37989283453 71498.12640287571 81610.90646100741 74545.68019405063 1.081879837400228 1.009326035334078 0.9994667033745293 1.08634820574596 0.9994164620751796 1.148907535147875 1.1829978566601453 0.9591183045987133 1.0947771386425775 1.0 16.18583713255194 -3.8688919275300564 18.555415601340076 1.0561333900800731 8.057652672841535 0.013539625591376558 0.06949075144286306 2242.348780129234 317650.4265031803 0.01701989892522885 621.5175993498908 0.00013524090629886903 3.8688919275300564 7.001519282761461 MAGFDGSAWDEEEEEPPDHQY(ph)YNDFPGK ddPTM_KYSE-520_SHP099_60min_R1 1 MAGFDGSAWDEEEEEPPDHQYYNDFPGK 28 0 P29353;P29353-6;P29353-2;P29353-7;Q5T188;X6R6D0;P29353-5;P29353-3;Q5T187 P29353 SHC1 SHC-transforming protein 1 1 MAGFDGSAWDEEEEEPPDHQY(0.929)Y(0.071)NDFPGK 112.37 6.8482e-05 249690000.0 109140.0 70988.0 62700.0 90095.0 84190.0 89387.0 82303.0 103010.0 97352.0 93317.0 True False 103085.78663480395 67577.62992483964 66741.74232354702 98657.60171195041 90815.2740244263 88829.10257657587 90622.99043987415 102652.68235271475 79675.33084420911 92490.2839795274 1.1145580076024186 0.7306457177685588 0.7216081457628588 1.0666807092276647 0.9818898820175331 0.9604155026298553 0.9798109221930102 1.109875307285647 0.8614454125997184 1.0 16.49701419933216 -5.27353215701244 24.93891678048843 0.9963477001509362 0.8431081259261439 0.22313702593930929 0.11786260132823125 955.6284952621284 1970789.206306601 0.032511671585276555 0.04864145974033429 5.326817808357635e-06 5.27353215701244 -0.15323957422479229 MAGFDGSAWDEEEEEPPDHQY(ph)YNDFPGKEPPLGGVVDMR ddPTM_KYSE-520_SHP099_60min_R1 2 MAGFDGSAWDEEEEEPPDHQYYNDFPGKEPPLGGVVDMR 39 1 P29353;P29353-6;P29353-2;P29353-7;Q5T188;X6R6D0;P29353-5;P29353-3 P29353 SHC1 SHC-transforming protein 1 1 MAGFDGS(0.01)AWDEEEEEPPDHQY(0.495)Y(0.495)NDFPGKEPPLGGVVDMR;MAGFDGSAWDEEEEEPPDHQY(0.5)Y(0.5)NDFPGKEPPLGGVVDMR 85.23899999999999 0.00084146 368410000.0 103379.0 91761.0 82707.0 79869.0 94028.0 78914.0 80384.0 76971.0 104287.0 83677.0 True False 97644.36078907263 87352.6638239309 88038.42555587896 87459.7257465096 101427.46865386337 78421.46845433796 88509.999192239 76704.0055661664 85351.10966133245 82935.68687972082 1.1773503598117343 1.0532578569056272 1.061526453425996 1.0545487598523162 1.222965317704074 0.9455696504698913 1.0672124693511305 0.9248612804932569 1.0291240462638798 1.0 16.339705400520867 -6.287688168665122 24.999572512257103 0.9932735045857536 1.1043488778809205 0.4724278399294145 0.06330605322028753 730.5382057655345 695768.3450837076 0.021703189820868152 0.019146283954625483 5.155987209619668e-07 6.287688168665122 0.11107537329516692 MAGFDGSAWDEEEEEPPDHQYY(ph)NDFPGK ddPTM_KYSE-520_SHP099_60min_R1 1 MAGFDGSAWDEEEEEPPDHQYYNDFPGK 28 0 P29353;P29353-6;P29353-2;P29353-7;Q5T188;X6R6D0;P29353-5;P29353-3;Q5T187 P29353 SHC1 SHC-transforming protein 1 1 MAGFDGSAWDEEEEEPPDHQY(0.394)Y(0.606)NDFPGK 86.508 0.0021736999999999998 234240000.0 214500.0 202280.0 148680.0 169200.0 201530.0 210780.0 209630.0 190290.0 232000.0 208030.0 True False 202601.25740485123 192562.16517152978 158264.15069641126 185280.71712816512 217389.26445115358 209464.44383512888 230821.4461916433 189629.92840401994 189874.6482440679 206187.01604489083 0.9826091928152308 0.933919937662832 0.7675757364952318 0.8986051628383137 1.0543305229453623 1.015895413072589 1.1194761465551695 0.9196986892847506 0.9208855721677868 1.0 17.653593960986555 -5.701835920080986 8.260797096103017 1.0071984140612322 0.8886423063862643 0.33862586528061567 0.07461541773337772 0.3192675624533554 39.524749966713316 0.023564714705560222 0.030367332493596053 1.9868454216217337e-06 5.701835920080986 -0.11855610767496794 MAGNEALS(ph)PTSPFR ddPTM_KYSE-520_SHP099_60min_R1 5 MAGNEALSPTSPFR 14 0 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 MAGNEALS(0.569)PT(0.329)S(0.103)PFR;MAGNEALS(0.502)PT(0.435)S(0.063)PFR;MAGNEALS(0.946)PT(0.054)SPFR;MAGNEALS(0.913)PT(0.044)S(0.044)PFR;MAGNEALS(0.955)PT(0.043)S(0.002)PFR 152.94 1.8684e-06 6893330000.0 2723180.0 3033660.0 2185510.0 2074850.0 2605950.0 4697790.0 3704110.0 5309380.0 6023320.0 5598840.0 True False 2572119.7768752584 2887918.4199835053 2326391.471539638 2272043.1201736 2811023.43917275 4668469.350053283 4078557.587429885 5290962.999998607 4929636.92354078 5549238.633431601 0.46350859041804837 0.5204170537170865 0.419227145418509 0.40943330612700435 0.506560201292774 0.8412810582568769 0.7349760673218229 0.9534574649796095 0.888344735049236 1.0 22.40385841373795 -6.332157957618992 1.7590461259133183 0.9022125972622619 0.4481262753098152 0.8995712774594221 0.07035371642538893 0.10864538415416747 0.6646605617971273 0.030702507340850484 0.026617182691437116 4.6541678559646343e-07 6.332157957618992 -0.4540863219524467 MAGNEALSPTS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 4 MAGNEALSPTSPFR 14 0 Q86WR7;Q86WR7-2;D3DRR9 Q86WR7 PROSER2;C10orf47 Proline and serine-rich protein 2 1 MAGNEALSPTS(1)PFR;MAGNEALS(0.018)PT(0.066)S(0.917)PFR;MAGNEALSPT(0.014)S(0.986)PFR;MAGNEALS(0.002)PT(0.015)S(0.983)PFR 200.81 3.7250999999999996e-11 2996510000.0 3405960.0 3485100.0 2655090.0 2338010.0 2840230.0 4349450.0 3183580.0 3864880.0 4448310.0 4547920.0 True False 3217024.609187073 3317670.5647582524 2826241.349694201 2560213.767451662 3063739.942301887 4322303.469203446 3505407.3351466483 3851473.633349771 3640609.036769701 4507628.967028223 0.7136844298229772 0.7360123446330404 0.6269906796604595 0.5679734925342697 0.6796788211079717 0.958886257236261 0.7776610188610273 0.8544344846308324 0.8076549918814351 1.0 22.103937338281927 -6.1739352948515505 7.009359494642865 0.8638853466881562 0.6599036874791502 0.6684028647778363 0.07527545820159275 0.17206110952810486 11.87193124125638 0.025121100302118306 0.025129946590889685 6.699844223637966e-07 6.1739352948515505 -0.20398165920900602 MAKCKR ddPTM_KYSE-520_SHP099_60min_R1 4 MAKCKR 6 2 Q8WUH2 Q8WUH2 TGFBRAP1 Transforming growth factor-beta receptor-associated protein 1 0 ;;; 59.287 0.040391 1840380000.0 1376490.0 1266210.0 1020490.0 979530.0 1217030.0 1050110.0 959770.0 873330.0 1227000.0 922420.0 False True 1300133.355735213 1205379.3709800423 1086272.4182417316 1072624.2366935667 1312803.3370465324 1043555.8739714747 1056792.9180525367 870300.6220667548 1004207.7301528946 914248.0764319013 1.4220793997284988 1.3184379623573932 1.1881593696988693 1.173231056585616 1.4359377622866871 1.1414362259795303 1.1559148389756038 0.9519304929394402 1.098397421925223 1.0 19.802226160591832 -6.755181552440158 1.825581295634469 1.0232895161904418 1.2927777169605479 0.6251165660843319 0.09401886206290477 0.24242826489474228 1.6531577449358608 0.05010366014845362 0.03147826274971116 1.75718888525621e-07 6.755181552440158 0.26948820077010605 MALLQEFASRPLGAAPQAEHQGLPVPGS(ph)PGGQK ddPTM_KYSE-520_SHP099_60min_R1 5 MALLQEFASRPLGAAPQAEHQGLPVPGSPGGQK 33 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 MALLQEFASRPLGAAPQAEHQGLPVPGS(1)PGGQK;MALLQEFASRPLGAAPQAEHQGLPVPGS(1)PGGQK;MALLQEFASRPLGAAPQAEHQGLPVPGS(1)PGGQK;MALLQEFASRPLGAAPQAEHQGLPVPGS(1)PGGQK;MALLQEFASRPLGAAPQAEHQGLPVPGS(1)PGGQK 208.35 2.0495e-22 9798460000.0 4108900.0 4988800.0 4041120.0 3589410.0 4279490.0 5297000.0 3752690.0 4674300.0 6187520.0 4261850.0 True False 3880971.1261109244 4749130.559658539 4301617.06122061 3930546.4472045302 4616261.516032692 5263939.458177617 4132048.5279250033 4658085.944289824 5064022.342685927 4224093.324669127 0.9187702135854019 1.1242958416479913 1.0183527518435107 0.9305065359824666 1.0928407971181089 1.2461702556228302 0.9782095731155906 1.1027421948956802 1.1988424387102268 1.0 22.010210278440525 -5.940367212803948 11.280438934779403 1.110975156021785 1.00873401110566 0.23731553156281715 0.09147064432425665 0.9180312248985486 170.08133354419402 0.02802897902142705 0.03178750193187872 1.1471832234562151e-06 5.940367212803948 -0.10224114491612513 MALPPQEDAT(ph)ASPPRQK ddPTM_KYSE-520_SHP099_60min_R1 1 MALPPQEDATASPPRQK 17 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.562)AS(0.438)PPRQK 66.325 0.037518 0.0 223370.0 228610.0 245030.0 135230.0 147340.0 187510.0 132200.0 156580.0 286020.0 168400.0 True False 210979.22082294425 217627.23244939436 260825.02586186185 148082.2185416178 158934.8197500766 186339.680536697 145564.06614766602 156036.86052604663 234085.97797744974 166908.10701321746 1.2640441773522528 1.3038745471612139 1.562686381921563 0.887208064314642 0.9522294788083034 1.1164207890869 0.8721210056988951 0.9348668756616481 1.4024841702800719 1.0 17.348694505013384 -5.267874938792764 24.997385455866485 1.0154845516811757 1.3695689898121963 0.5009347337411305 0.1613848247136055 411.58553308897973 1598705.3508771912 0.04511183665474522 0.06877406761586347 5.396660045617502e-06 5.267874938792764 0.35408443813102064 MALPPQEDATAS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 6 MALPPQEDATASPPR 15 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MALPPQEDAT(0.036)AS(0.964)PPR;MALPPQEDAT(0.113)AS(0.887)PPR;MALPPQEDATAS(1)PPR;MALPPQEDAT(0.007)AS(0.993)PPR;MALPPQEDAT(0.094)AS(0.906)PPR;MALPPQEDAT(0.006)AS(0.994)PPR 179.9 8.0563e-09 6105550000.0 3341170.0 3894440.0 3148260.0 2619040.0 2777990.0 3743510.0 2917730.0 3399450.0 4011780.0 3936350.0 True False 3155828.6396427327 3707345.2567263874 3351201.876994102 2867952.7741569136 2996602.00839905 3720145.365505468 3212682.622700679 3387658.101387597 3283341.8807439073 3901477.001433955 0.8088804928192155 0.950241474027345 0.8589572297266896 0.735094112589366 0.7680686076831094 0.9535223106885315 0.8234529183485856 0.8683014407473097 0.8415638178918247 1.0 21.89558896490102 -6.255911071512953 24.907453512892342 0.8845172380954086 0.8282232580579388 0.19202548379017803 0.07241101904296124 1026.713581783848 4625806.002024148 0.02540848412092062 0.024720600787591748 5.54739292746863e-07 6.255911071512953 -0.05629398003746977 MALRQS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 MALRQSR 7 1 Q12923-3;Q12923;Q12923-4;Q12923-2 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 MALRQS(1)R;MALRQS(1)R 74.267 0.035477999999999996 947690000.0 1471890.0 1322080.0 1258120.0 1130900.0 1168900.0 1209170.0 1153590.0 1203560.0 1479650.0 1146170.0 True False 1390241.3275600276 1258565.292317463 1339220.4282631725 1238380.395982517 1260885.7798687702 1201623.1215111618 1270206.1351534496 1199385.131273017 1210982.8589411005 1136015.825506767 1.2237869370700472 1.1078765489521485 1.1788747992711788 1.0901084018174536 1.1099192031997438 1.057752096873411 1.1181236270074155 1.0557820624884178 1.0659911875795316 1.0 20.11555150207267 -1.0000000000000868 0.14248687048094005 0.987669378253706 1.7063446785893588 0.7313007017652742 0.03153974452810909 37.5667655409235 0.35590276335893595 0.12151320487316576 5.519299979029578 0.09999999999998001 1.0000000000000868 0.7186753003356527 MANSS(ph)PVLSK ddPTM_KYSE-520_SHP099_60min_R1 7 MANSSPVLSK 10 0 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 1 MANS(0.017)S(0.983)PVLSK;MANS(0.038)S(0.962)PVLSK;MANS(0.006)S(0.994)PVLSK;MANS(0.034)S(0.966)PVLSK;MANS(0.194)S(0.806)PVLSK;MANS(0.046)S(0.954)PVLSK;MANS(0.011)S(0.988)PVLS(0.001)K 277.1 2.1296e-20 12789200000.0 20896160.0 20479480.0 16851400.0 14769450.0 15646620.0 18664370.0 16823990.0 18788520.0 21234670.0 19603730.0 True False 19737008.349337775 19495615.040473823 17937668.207193315 16173134.087402947 16877919.97691017 18547878.74363349 18524723.095519453 18723347.009393547 17378989.21046923 19430056.203671157 1.0157978001941457 1.0033740940384042 0.923191781802676 0.8323771129569435 0.8686500852077421 0.954597276982092 0.9534055332284295 0.9636280416860511 0.8944384426013964 1.0 24.21178673830208 -9.653283795165692 19.98420206248509 0.9999999855108463 0.9331648362769221 0.11583635546062443 0.054290056615209636 0.0 0.0 0.05835701613553095 0.014153655383686372 2.2218575155600208e-10 9.653283795165692 -0.0668351492339242 MAPALSGANLTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 11 MAPALSGANLTSPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MAPALSGANLT(0.019)S(0.981)PR;MAPALSGANLT(0.021)S(0.979)PR;MAPALSGANLT(0.473)S(0.527)PR;MAPALSGANLT(0.025)S(0.975)PR;MAPALSGANLT(0.066)S(0.934)PR;MAPALSGANLT(0.014)S(0.986)PR;MAPALS(0.001)GANLT(0.487)S(0.511)PR;MAPALSGANLT(0.006)S(0.994)PR;MAPALSGANLT(0.258)S(0.742)PR;MAPALS(0.007)GANLT(0.281)S(0.713)PR;MAPALSGANLT(0.231)S(0.769)PR 234.63 2.6849000000000003e-18 28116810000.0 15030530.0 14831870.0 12495980.0 9725670.0 10557610.0 14189950.0 11031050.0 13115650.0 15377410.0 13892260.0 True False 14196756.538281297 14119324.702109253 13301490.865074914 10649994.75267069 11388433.842416236 14101385.258555323 12146176.186673312 13070154.871365711 12585259.976960395 13769185.384414734 1.031052755985879 1.0254291962755355 0.9660332469726784 0.77346585548375 0.827095686815775 1.0241263273654957 0.8821274351074903 0.9492322535042449 0.9140163071088855 1.0 23.714939873166667 -5.003775575660886 13.218445265361195 0.905087950753474 1.0201469214860577 0.31093417267690404 0.07020546917295215 0.4543568865125438 1591.537884572528 0.019294641245282403 0.0377166158101599 9.913440956989076e-06 5.003775575660886 0.11505897073258364 MAPPVDDLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 12 MAPPVDDLSPK 11 0 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 PHF3 PHD finger protein 3 1 MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK;MAPPVDDLS(1)PK 189.3 8.602799999999999e-07 23339840000.0 33865450.0 35654080.0 28361800.0 25971440.0 28495170.0 30505130.0 27960800.0 33969240.0 38265170.0 34816540.0 True False 31986865.979399107 33941204.47893482 30190047.00848451 28439757.84900187 30737577.7636609 30314736.168366563 30787350.535110876 33851408.63492021 31317179.714437384 34508092.54245825 0.9269381070554085 0.9835723153105045 0.8748686115101586 0.8241474898680653 0.8907353463782977 0.8784819424912506 0.8921776970787525 0.9809701476043607 0.9075314631170989 1.0 25.040431394270367 -7.871991583224543 0.9307592783089044 0.9931561266860351 0.8955440150901743 0.30460955910520293 0.04473358442520983 0.7292845710930143 1.4087052434372904 0.04607265679888247 0.016211870755028956 1.342790984633803e-08 7.871991583224543 -0.0976121115958608 MAPS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 4 MAPSPTK 7 0 Q15287-2;Q15287-3;H3BMS0 Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 MAPS(0.991)PT(0.009)K;MAPS(0.999)PT(0.001)K;MAPS(1)PTK;MAPS(1)PTK 110.76 0.0029766 2725060000.0 10377200.0 10306400.0 8157200.0 6958400.0 7888370.0 10202300.0 7624400.0 9219800.0 10876500.0 10370300.0 True False 9801556.02956466 9811265.073778212 8683026.163981458 7619724.243880752 8509139.840314323 10138623.661348967 8395148.758973254 9187818.66571749 8901601.774252618 10278427.209971324 0.9536046546164144 0.9545492586900934 0.8447815980598536 0.7413317318128879 0.8278639977193615 0.9863983520273676 0.8167736743642003 0.8938934408957228 0.8660470704717335 1.0 23.293116186528373 -9.866747506032427 5.434662096413299 1.0000000872943526 0.874156570280133 0.21674261725763488 0.07054759655583519 7.924256748911983e-08 1.6603817267575798e-08 0.07252263974051246 0.01758931157106004 1.3591033844823966e-10 9.866747506032427 -0.12584351701421959 MAPTPIPTRS(ph)PS(ph)DSSTASTPVAEQIER ddPTM_KYSE-520_SHP099_60min_R1 1 MAPTPIPTRSPSDSSTASTPVAEQIER 27 1 Q16643;Q16643-2;Q16643-3;D6R9Q9 Q16643 DBN1 Drebrin 2 MAPT(0.008)PIPT(0.155)RS(0.848)PS(0.982)DS(0.004)S(0.001)T(0.002)ASTPVAEQIER 69.20100000000001 0.017668 161180000.0 77058.0 72216.0 76992.0 65598.0 68194.0 72030.0 63675.0 76536.0 86174.0 73370.0 True False 72783.43912868542 68746.6349615741 81955.02751155553 71832.41419724222 73560.47982921635 71580.43405182812 70111.89040811376 76270.51447963662 70526.97386975998 72719.99888099617 1.000872390658216 0.9453607813453857 1.1269943450586706 0.9877944898595715 1.0115577689927582 0.984329416299457 0.9641349214381798 1.0488244726798024 0.9698428899204881 1.0 16.150064556881507 MAPTPIPTRS(ph)PSDSSTASTPVAEQIER ddPTM_KYSE-520_SHP099_60min_R1 7 MAPTPIPTRSPSDSSTASTPVAEQIER 27 1 Q16643;Q16643-2;Q16643-3;D6R9Q9 Q16643 DBN1 Drebrin 1 MAPTPIPT(0.004)RS(0.995)PS(0.001)DSSTASTPVAEQIER;MAPTPIPT(0.103)RS(0.894)PS(0.002)DSSTASTPVAEQIER;MAPTPIPT(0.123)RS(0.686)PS(0.181)DS(0.006)S(0.002)T(0.002)ASTPVAEQIER;MAPTPIPT(0.159)RS(0.835)PS(0.005)DS(0.001)STASTPVAEQIER;MAPTPIPT(0.289)RS(0.71)PS(0.001)DSSTASTPVAEQIER;MAPT(0.003)PIPT(0.095)RS(0.69)PS(0.123)DS(0.023)S(0.026)T(0.028)AS(0.006)T(0.006)PVAEQIER;MAPTPIPT(0.149)RS(0.84)PS(0.011)DSSTASTPVAEQIER 244.14 3.3593e-31 11408910000.0 1978652.0 2379998.0 1922904.0 1541558.0 1561356.0 1942146.0 1628314.0 1852875.0 2616715.0 2059612.0 True False 1868892.229215027 2265659.32363017 2046857.4685951828 1688067.2088336858 1684225.8342995844 1930024.3464115183 1792919.8699332105 1846447.809089278 2141585.518017143 2041365.4400338887 0.9155108598213565 1.1098744395283568 1.0026903701089418 0.8269304337814508 0.8250486665785939 0.9454575396257703 0.878294417438284 0.9045160522844088 1.0490946285352958 1.0 20.96110304240091 -5.068010304942118 9.695163541903197 0.9103000163854814 1.0235215385903655 0.20975346312467757 0.07933875154318705 0.6298251925641072 87.17744195836441 0.02137015380010534 0.03713678262374479 8.550464240972072e-06 5.068010304942118 0.11322152220488413 MAPVPLDDSNRPAS(ph)LTK ddPTM_KYSE-520_SHP099_60min_R1 4 MAPVPLDDSNRPASLTK 17 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 MAPVPLDDSNRPAS(0.997)LT(0.003)K;MAPVPLDDSNRPAS(0.999)LT(0.001)K;MAPVPLDDSNRPAS(0.999)LT(0.001)K;MAPVPLDDSNRPAS(1)LTK 220.63 2.2880999999999998e-18 2743940000.0 1513530.0 1550090.0 1193950.0 954000.0 1039130.0 1364000.0 1090820.0 1383020.0 1582510.0 1447200.0 True False 1429571.4737527457 1475621.3496674744 1270913.9273875426 1044667.8731694407 1120903.6191590684 1355486.770049889 1201090.7309772843 1378222.6264192942 1295166.07583069 1434378.9339045642 0.9966484029860003 1.0287528035918954 0.8860377807752315 0.7283067594458601 0.7814557176378939 0.944999078005196 0.8373594331225714 0.9608497404989034 0.9029455503122046 1.0 20.45199477456823 -9.687847653317261 14.178224148935717 0.9999985045581078 0.8932302091528457 0.10777438645064097 0.08903654133773689 0.0 0.0 0.09511115694964241 0.02306784389871029 2.0518818346860775e-10 9.687847653317261 -0.10676829540526211 MAS(ph)PPAPS(ph)PAPPAIS(ph)PIIK ddPTM_KYSE-520_SHP099_60min_R1 2 MASPPAPSPAPPAISPIIK 19 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 3 MAS(1)PPAPS(1)PAPPAIS(1)PIIK;MAS(1)PPAPS(1)PAPPAIS(1)PIIK 92.31 0.00020365 72844000.0 193660.0 194801.0 190929.0 161217.0 165516.0 178546.0 133738.0 165352.0 211488.0 201009.0 True False 182917.29374836106 185442.46755773775 203236.58883720118 176539.0152083415 178541.16754278354 177431.628185724 147257.54219709957 164778.43250544675 173087.11037862697 199228.21664263544 0.9181294539039517 0.9308042338720233 1.020119500450861 0.8861145182311572 0.8961640602497628 0.8905948724321066 0.7391399907034354 0.8270838101262392 0.8687881330037756 1.0 17.604062464852504 -5.830206116531438 1.6299686112709324 0.8475712137399578 0.9509753021098826 0.20751451489520478 0.06786461181976869 0.4739691642131314 2.607143736996574 0.02496983115845985 0.03173523455822134 1.4784065686211843e-06 5.830206116531438 0.10340408836992476 MAS(ph)PPAPSPAPPAIS(ph)PIIK ddPTM_KYSE-520_SHP099_60min_R1 4 MASPPAPSPAPPAISPIIK 19 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 2 MAS(1)PPAPS(0.202)PAPPAIS(0.798)PIIK;MAS(1)PPAPSPAPPAIS(1)PIIK;MAS(0.998)PPAPS(0.002)PAPPAIS(1)PIIK;MAS(1)PPAPSPAPPAIS(1)PIIK 240.44 4.3868999999999997e-26 569323000.0 1121426.0 1052630.0 931374.0 1019426.0 1068026.0 1044550.0 971600.0 1062090.0 1206224.0 1011342.0 True False 1059218.2642726928 1002060.0747701586 991411.8582910895 1116311.940538397 1152073.5699633183 1038030.575993852 1069818.8099022126 1058405.8576836702 987204.1280325552 1002382.2966921703 1.056700889239644 0.9996785438818353 0.9890556343250645 1.1136588746850289 1.1493355117754218 1.0355635563590058 1.0672762412430672 1.0558904134444271 0.984857904304872 1.0 19.935001409547553 -10.085060304595062 10.654956017746455 1.000004242868099 1.051956220659103 0.08227112684627202 0.050022974126383866 0.0 0.0 0.05207245169299609 0.012629424618535064 8.221284841686099e-11 10.085060304595062 0.05195197779100402 MAS(ph)VVIDDLPK ddPTM_KYSE-520_SHP099_60min_R1 2 MASVVIDDLPK 11 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 MAS(1)VVIDDLPK;MAS(1)VVIDDLPK 156.14 3.2776e-05 105850000.0 295560.0 251990.0 232010.0 188333.0 175704.0 225490.0 201011.0 232080.0 283760.0 283820.0 True False 279164.69761574717 239884.02215529894 246965.73582912533 206232.11169561898 189530.90518099276 224082.6332687317 221331.1535583096 231274.9686478794 232236.33700748612 281305.57560861873 0.9923894932112893 0.8527524619314701 0.877926913801131 0.7331248634138355 0.6737545275131257 0.7965808455232986 0.7867997393206606 0.8221485413060313 0.8255660646079664 1.0 18.101778622266057 -4.242084317491859 1.39128991450693 0.7956259148532441 1.0741813205801625 0.2895792926444467 0.08196797547966406 1.5333382128336719 2.57714679012936 0.023427828615975976 0.6075020115040124 5.726848344621938e-05 4.242084317491859 0.2785554057269184 MASNIFGT(ph)PEENQASWAK ddPTM_KYSE-520_SHP099_60min_R1 15 MASNIFGTPEENQASWAK 18 0 Q9UK76-3;Q9UK76;J3KSH8;J3KT51;Q9UK76-2 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 MAS(0.056)NIFGT(0.944)PEENQASWAK;MAS(0.001)NIFGT(0.999)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK;MASNIFGT(1)PEENQASWAK 350.88 4.920700000000001e-59 10506912000.0 12621530.0 13191290.0 11729680.0 9267460.0 9977000.0 12033970.0 10087710.0 11230000.0 14344100.0 12560040.0 True False 11921388.570503721 12557560.62787005 12485793.940951554 10148236.61203656 10762133.138635246 11958861.529455472 11107474.173362117 11191045.7511017 11739573.025335072 12448767.817163242 0.957636028368011 1.0087392432973818 1.0029742802124773 0.8152000873568453 0.8645139259322826 0.9606462025075019 0.8922549071923512 0.8989681481304915 0.9430309246469842 1.0 23.569499615176216 -5.205220978709155 24.999943119136475 0.9058425651689235 0.9916788827898062 0.34178587754051803 0.04998560284837358 306.2352570269239 136180.0714240999 0.013455685581465992 0.023305914060393645 6.234175460291517e-06 5.205220978709155 0.08583631762088273 MATAAET(ph)S(ph)AS(ph)EPEAESKAGPKADGEEDEVK ddPTM_KYSE-520_SHP099_60min_R1 1 MATAAETSASEPEAESKAGPKADGEEDEVK 30 2 A0A494C0L2;F8W667;A0A499FI31;Q15020-2;Q15020-4;Q15020;Q15020-3 A0A494C0L2 SART3 Squamous cell carcinoma antigen recognized by T-cells 3 3 MAT(0.553)AAET(0.655)S(0.663)AS(0.642)EPEAES(0.487)KAGPKADGEEDEVK 60.574 0.017036000000000003 362740000.0 82961.0 88266.0 79410.0 45288.0 93068.0 82155.0 83106.0 102090.0 110420.0 103480.0 True False 78358.98795134667 84025.56887003292 84528.89566049226 49592.157903666324 100391.92211551621 81642.24017115007 91507.16551639895 101735.87361798501 90370.51146168093 102563.2477062217 0.7640065004161648 0.8192561248714803 0.8241636019816148 0.48352756969744404 0.9788293990365345 0.7960184763747247 0.8922023001700241 0.9919330354026368 0.8811198307656445 1.0 16.646154325744366 -6.54223451761278 1.1488542783450624 0.9542892760144766 0.7526715469375277 0.3433354272980085 0.11679698840354545 0.5801502209339767 1.5661019432618348 0.07002933578817123 0.04876631107650632 2.869230788293389e-07 6.54223451761278 -0.20161772907694886 MATIDENGNQNGSGRPGFAFCQPLEHDLLS(ph)PVEK ddPTM_KYSE-520_SHP099_60min_R1 1 MATIDENGNQNGSGRPGFAFCQPLEHDLLSPVEK 34 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 MATIDENGNQNGSGRPGFAFCQPLEHDLLS(1)PVEK 110.56 0.00015549999999999999 246450000.0 58919.0 60942.0 60789.0 51753.0 79668.0 122340.0 124440.0 184510.0 216880.0 139640.0 True False 55650.645617885435 58014.254844193056 64707.55620583893 56671.58955989317 85937.41835108676 121576.43068028112 137019.60961736427 183869.97787495778 177500.05909988587 138402.89823827596 0.40209162037977464 0.41916936410041844 0.4675303554296796 0.40946822849277864 0.6209221009457183 0.8784240231080551 0.9900053493205742 1.3285124821476295 1.2824880212717786 1.0 17.07851462861238 -6.451402035427267 1.2372742334544031 1.222797964021693 0.4173124620105977 0.9243812461044134 0.09481327034081999 0.10807318937712772 0.33780864472475514 0.05118220330342343 0.03897823093225382 3.536697900219378e-07 6.451402035427267 -0.8054855020110954 down MCHNVNR ddPTM_KYSE-520_SHP099_60min_R1 4 MCHNVNR 7 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 0 ;;; 148.28 0.0017638999999999999 1914320000.0 638640.0 607420.0 449965.0 441409.0 599250.0 565380.0 448249.0 533463.0 504123.0 466136.0 False True 603213.3661027226 578238.6314439918 478970.46386945475 483360.3786455448 646407.5657339053 561851.2537029375 493562.38340866205 531612.5413642008 412586.97110665654 462006.3976883208 1.3056385563510378 1.2515814376970678 1.0367182495004719 1.0462200979555047 1.3991312002782814 1.216111414288194 1.0683020535608028 1.1506605623302164 0.8930330254538951 1.0 18.817553304106948 -7.444795380332808 1.5377559742787452 0.9568668038779373 1.1981328461309935 0.3962898276503597 0.11472901550890406 0.4603583405374594 1.9199930939668994 0.10551844871324985 0.036094274976620225 3.5909108206446694e-08 7.444795380332808 0.24126604225305615 MDELQLFR ddPTM_KYSE-520_SHP099_60min_R1 5 MDELQLFR 8 0 P55072;C9JUP7;C9IZA5 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ;;;; 174.69 0.00066778 1233970000.0 1043886.0 1181030.0 752150.0 734748.0 1186050.0 1112266.0 818035.0 957608.0 869917.0 936327.0 False True 985979.5626448508 1124291.5460378297 800634.7924825508 804578.2290099593 1279385.3872986198 1105323.935319876 900729.9610522392 954286.2813553875 711962.0016229961 928031.8712313831 1.0624414884982112 1.2114794554911508 0.8627233797694985 0.8669726266430741 1.3786006999964713 1.1910409217446902 0.9705808485403442 1.0282904186137143 0.7671740849571371 1.0 19.823814826856367 -7.313336131964537 2.1435887942838394 0.8975228013431905 1.088019321241043 0.1781367044758596 0.15945264689693886 0.6133684067191134 5.274311137100534 0.12280006614919278 0.048524178289928825 4.86030885563867e-08 7.313336131964537 0.19049651989785243 MDFAFPGS(ph)T(ph)NSLHR ddPTM_KYSE-520_SHP099_60min_R1 1 MDFAFPGSTNSLHR 14 0 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 2 MDFAFPGS(0.872)T(0.726)NS(0.402)LHR 67.645 0.018986000000000003 0.0 267690.0 324560.0 231000.0 499080.0 318580.0 334680.0 337340.0 551270.0 523180.0 329160.0 True False 252840.7020732147 308967.650425508 245890.62961306813 546512.4131461267 343650.4335277554 332591.1379767577 371441.61932113254 549357.7730373853 428183.70029453275 326243.89848260494 0.7750051518180223 0.9470449926038444 0.7537018493119154 1.6751651622850696 1.0533543619546912 1.019455504068197 1.1385396663316831 1.6838867350240319 1.3124650063527952 1.0 18.31559139462906 -5.228981064632737 24.992525774013643 1.2726598899559693 0.8374300004489025 0.4243549279919231 0.23667791417730452 669.5744279274934 515563.81441831385 0.06604008848151853 0.11437427246862879 5.902268136736797e-06 5.228981064632737 -0.43522988950706687 MDFAFPGS(ph)TNS(ph)LHR ddPTM_KYSE-520_SHP099_60min_R1 8 MDFAFPGSTNSLHR 14 0 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 2 MDFAFPGS(0.72)T(0.598)NS(0.681)LHR;MDFAFPGS(0.917)T(0.085)NS(0.998)LHR;MDFAFPGS(0.993)T(0.175)NS(0.832)LHR;MDFAFPGS(0.979)T(0.098)NS(0.923)LHR;MDFAFPGS(0.965)T(0.082)NS(0.953)LHR;MDFAFPGS(0.954)T(0.076)NS(0.969)LHR;MDFAFPGS(0.914)T(0.227)NS(0.859)LHR;MDFAFPGS(0.984)T(0.021)NS(0.995)LHR 152.01 2.2763e-06 5278430000.0 3696350.0 4257050.0 3412200.0 6773740.0 4622160.0 5239320.0 4463380.0 7286160.0 7120900.0 4848010.0 True False 3491306.0970089557 4052534.928037678 3632155.871713036 7417514.213000806 4985897.695507093 5206619.460452924 4914582.008790996 7260886.01156253 5827924.063280967 4805060.403094701 0.7265894295023594 0.8433889666460055 0.7559022295273843 1.5436880269441677 1.0376347594498343 1.083570033188261 1.0227929716816375 1.51109151653664 1.2128721752441427 1.0 22.196123136160338 -5.227917146562633 24.862218259623578 1.2037515943587112 0.7821029265778494 0.5333132431751066 0.18273510918329802 473.5855157829612 351240.4965034889 0.04964176210263766 0.08597553307041915 5.916745013483634e-06 5.227917146562633 -0.42164866778086174 MDFAFPGS(ph)TNSLHR ddPTM_KYSE-520_SHP099_60min_R1 2 MDFAFPGSTNSLHR 14 0 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 1 MDFAFPGS(0.333)T(0.333)NS(0.333)LHR;MDFAFPGS(0.448)T(0.36)NS(0.192)LHR 69.92 0.022716 2294420000.0 453290.0 522210.0 425640.0 676490.0 562710.0 505410.0 509240.0 536460.0 715890.0 498660.0 True False 428145.1000887875 497122.2477468097 453077.4354480788 740783.4062058656 606992.0756180657 502255.54871767975 560718.9489034604 534599.1454707053 585902.4221183012 494242.2603516099 0.866265664502667 1.0058270763676722 0.9167112402038508 1.4988265181509637 1.2281266178781316 1.0162132804272324 1.1345022348039566 1.0816540558275713 1.1854559375426195 1.0 18.914858848505048 MDFAFPGSTNS(ph)LHR ddPTM_KYSE-520_SHP099_60min_R1 20 MDFAFPGSTNSLHR 14 0 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 1 MDFAFPGST(0.002)NS(0.998)LHR;MDFAFPGS(0.001)T(0.007)NS(0.992)LHR;MDFAFPGSTNS(1)LHR;MDFAFPGST(0.002)NS(0.998)LHR;MDFAFPGS(0.003)T(0.025)NS(0.972)LHR;MDFAFPGST(0.001)NS(0.999)LHR;MDFAFPGSTNS(1)LHR;MDFAFPGST(0.001)NS(0.999)LHR;MDFAFPGSTNS(1)LHR;MDFAFPGSTNS(1)LHR;MDFAFPGSTNS(1)LHR;MDFAFPGST(0.001)NS(0.999)LHR;MDFAFPGS(0.003)T(0.038)NS(0.96)LHR;MDFAFPGST(0.003)NS(0.997)LHR;MDFAFPGS(0.002)T(0.02)NS(0.978)LHR;MDFAFPGST(0.007)NS(0.993)LHR;MDFAFPGS(0.007)T(0.054)NS(0.938)LHR;MDFAFPGS(0.002)T(0.022)NS(0.976)LHR;MDFAFPGS(0.023)T(0.406)NS(0.571)LHR;MDFAFPGS(0.001)T(0.019)NS(0.98)LHR 214.34 5.605e-14 24766886000.0 10866766.0 14159890.0 11529014.0 22579160.0 13239770.0 14726800.0 12938037.0 15315110.0 19389970.0 12704227.0 True False 10263964.827619027 13479627.629971806 12272192.689514615 24725076.577728037 14281664.575013407 14634884.578570917 14245940.043032907 15261985.457983553 15869240.229366513 12591677.432519032 0.8151387996258149 1.0705188170687705 0.9746273088143664 1.963604667466585 1.1342146152926253 1.162266477758963 1.1313774609760576 1.2120692846346455 1.2602959625047978 1.0 23.585967152381624 -5.0561107307795465 24.99998333593761 1.2757555390231876 0.9627558495883743 0.24221015345222197 0.2531076371753078 403.21888181236767 179652.38018068965 0.06908773933193287 0.11966412332148282 8.787984236290402e-06 5.0561107307795465 -0.31299968943481327 MDFKEDLSGIAEMFKT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 MDFKEDLSGIAEMFKTPVK 19 2 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MDFKEDLSGIAEMFKT(1)PVK;MDFKEDLSGIAEMFKT(1)PVK 202.2 2.0807e-13 385740000.0 1198130.0 1229400.0 1193080.0 1065140.0 1050820.0 952980.0 835690.0 1141490.0 1498820.0 926170.0 True False 1131667.340487059 1170337.7786329798 1269987.845795496 1166370.585353983 1133513.5556520673 947032.0983300178 920169.7007484346 1137530.437615769 1226672.0701774734 917964.8543493574 1.232800291999383 1.27492656509437 1.3834819925602142 1.270604838330867 1.2348114966291255 1.031664876757469 1.0024018854192844 1.2391873525724872 1.3362952452541594 1.0 19.808079393406476 -6.030986650846125 4.807938450247952 1.1288237759990305 1.2924686826108145 0.3674507937830691 0.10492394366374566 0.2471152426949595 14.31705565093841 0.03711459281687329 0.03880437418204131 9.311364958944074e-07 6.030986650846125 0.163644906611784 MDIDAPDVDVHGPDWHLK ddPTM_KYSE-520_SHP099_60min_R1 2 MDIDAPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 188.27 2.149e-12 2047370000.0 2116900.0 2239370.0 1464610.0 1339420.0 2192880.0 2215960.0 1515630.0 1859680.0 2037280.0 1736270.0 False True 1999471.3370644713 2131787.303837102 1559021.1040588554 1466718.074088693 2365447.1802195474 2202129.3716713763 1668844.6715233529 1853229.2041325772 1667361.3076494613 1720887.9985976177 1.1618834803275264 1.2387716722845028 0.9059399015678705 0.8523030408044844 1.3745503380505835 1.2796471202460187 0.969757865057647 1.0769028580842022 0.9688958892201142 1.0 20.71472177412478 MDKEETKDWILPSDYDHAEAEAR ddPTM_KYSE-520_SHP099_60min_R1 2 MDKEETKDWILPSDYDHAEAEAR 23 2 O43852;O43852-3;O43852-2;O43852-4;H0Y875;O43852-15 O43852 CALU Calumenin 0 ; 209.76 1.3579e-20 1336010000.0 774220.0 861690.0 538770.0 548320.0 726110.0 742910.0 581860.0 555850.0 658910.0 568050.0 False True 731272.4732306944 820293.1189769402 573499.9762624791 600432.1679415803 783250.7259992422 738273.2231215273 640680.0872063616 553921.8860863651 539268.5537693918 563017.5189362128 1.2988449713117083 1.4569584273804375 1.0186183501821973 1.0664537918394799 1.3911658157265632 1.3112793088862484 1.1379398787037525 0.9838448493271873 0.9578184259493503 1.0 19.102820288552564 -7.091697588881193 3.0690072283420124 0.9768730401748954 1.2522102414836196 0.49131777509172514 0.12566984047673752 0.25244388459949063 4.547177342215343 0.0724121314583971 0.03908091090983979 8.096594909683177e-08 7.091697588881193 0.2753372013087242 MDMMSLNSQLLDAIQQK ddPTM_KYSE-520_SHP099_60min_R1 1 MDMMSLNSQLLDAIQQK 17 0 H0YHW1;H0YHP2;Q6ZP65-2;Q6ZP65 H0YHW1 CCDC64 Bicaudal D-related protein 1 0 63.037 0.060374000000000004 1151900000.0 418170.0 918200.0 1929000.0 205280.0 185920.0 698090.0 237520.0 125680.0 251990.0 599770.0 False True 394973.2764987715 874088.2937537013 2053346.426509129 224789.74948031755 200550.8462599041 693732.9613666632 261530.8395718127 125244.04541393256 206234.96815096017 594456.5044139997 0.6644275461131108 1.4703990742188202 3.4541575561247604 0.37814330873864294 0.33736841092789804 1.1670037357073377 0.4399494961025336 0.21068664315044378 0.34693029114764484 1.0 19.18121172820612 MDRDPLGGLADMFGQMPGSGIGTGPGVIQDRFS(ph)PTMGR ddPTM_KYSE-520_SHP099_60min_R1 4 MDRDPLGGLADMFGQMPGSGIGTGPGVIQDRFSPTMGR 38 2 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 MDRDPLGGLADMFGQMPGSGIGT(0.002)GPGVIQDRFS(0.982)PT(0.016)MGR;MDRDPLGGLADMFGQMPGS(0.035)GIGT(0.032)GPGVIQDRFS(0.818)PT(0.116)MGR;MDRDPLGGLADMFGQMPGSGIGT(0.001)GPGVIQDRFS(0.854)PT(0.145)MGR;MDRDPLGGLADMFGQMPGSGIGTGPGVIQDRFS(0.996)PT(0.004)MGR 309.41 1.8083999999999998e-67 4942471000.0 919607.0 999916.0 966362.0 814737.0 811327.0 861942.0 697812.0 828595.0 945979.0 597031.0 True False 868594.5665188956 951878.5344554859 1028655.2407538688 892169.3595203895 875173.8190808365 856562.3002568495 768353.6469488288 825720.7973405258 774213.0597899791 591741.7698230897 1.4678608318939108 1.6086046025448983 1.7383515803885217 1.5077004954156223 1.4789792840591314 1.4475271882749328 1.298461062126035 1.3954073203035637 1.3083630381905302 1.0 19.17460820996707 -7.876292247796754 0.3020795334779098 0.9359606990290258 1.6530822575777175 0.817051992447227 0.08060239912511839 0.7783904784252533 0.2308893824123417 0.20608622084867984 0.13364451207367298 1.3295594225460899e-08 7.876292247796754 0.7171215585486918 MDRT(ph)PEKDK ddPTM_KYSE-520_SHP099_60min_R1 11 MDRTPEKDK 9 2 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK;MDRT(1)PEKDK 147.24 0.0002809 47036190000.0 53803640.0 48098220.0 46044470.0 46416710.0 48780040.0 44977660.0 47678820.0 50346110.0 57592770.0 47662830.0 True False 50819044.83430269 45787509.31429995 49012570.209956765 50828140.16270727 52618751.62753854 44696937.74032415 52498660.42604135 50171471.09528042 47135374.76358407 47240574.40732062 1.0757499347092516 0.9692411637400519 1.037510039301333 1.0759424668390718 1.1138465670177053 0.9461556786955093 1.111304447176788 1.0620419358725157 0.9977731082854859 1.0 25.4935231710625 -4.990182201710542 24.95844031668472 1.048768994186433 1.017715565665508 0.01620286662831516 0.0550332492994076 673.73171894956 1712708.215816515 0.013924862968539597 0.028924588519683936 1.022863775156048e-05 4.990182201710542 -0.031053428520925186 MDRT(ph)PPPPTLS(ph)PAAITVGR ddPTM_KYSE-520_SHP099_60min_R1 7 MDRTPPPPTLSPAAITVGR 19 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C4H9 E7EX82 PHC3 Polyhomeotic-like protein 3 2 MDRT(1)PPPPT(0.085)LS(0.91)PAAIT(0.006)VGR;MDRT(1)PPPPT(0.043)LS(0.926)PAAIT(0.031)VGR;MDRT(1)PPPPT(0.012)LS(0.988)PAAITVGR;MDRT(1)PPPPT(0.035)LS(0.964)PAAIT(0.001)VGR;MDRT(1)PPPPT(0.065)LS(0.935)PAAITVGR;MDRT(1)PPPPT(0.002)LS(0.998)PAAITVGR;MDRT(1)PPPPT(0.039)LS(0.96)PAAITVGR 180.68 2.4697e-09 10891900000.0 6224040.0 5607780.0 5260560.0 5276580.0 5660280.0 5281740.0 5134050.0 5525090.0 7183930.0 5491570.0 True False 5878780.093883861 5338373.8313506115 5599664.114793598 5778064.576738376 6105711.83341228 5248774.701498027 5653049.877499435 5505924.752355705 5879509.404137962 5442918.9621768035 1.0800785634943098 0.9807924513385772 1.0287979949189077 1.061574610404917 1.1217715854013752 0.9643308559197927 1.038606291363668 1.0115757354861854 1.0802125559823788 1.0 22.37594912573699 MDRT(ph)PPPPTLSPAAITVGR ddPTM_KYSE-520_SHP099_60min_R1 6 MDRTPPPPTLSPAAITVGR 19 1 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C4H9 E7EX82 PHC3 Polyhomeotic-like protein 3 1 MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(1)PPPPTLSPAAITVGR;MDRT(0.873)PPPPT(0.018)LS(0.03)PAAIT(0.08)VGR;MDRT(0.998)PPPPT(0.001)LS(0.001)PAAIT(0.001)VGR 109.42 0.00018049 7841820000.0 2317200.0 2413750.0 2102600.0 2451950.0 2360630.0 2092990.0 1873300.0 2341290.0 3003160.0 2315920.0 True False 2188660.296776322 2297789.826887388 2238136.9602789464 2684982.5907943547 2546398.150852613 2079926.873054779 2062671.4456461635 2333168.611451194 2457861.847502824 2295402.7505584974 0.9534972876737193 1.0010399379055852 0.9750519640766233 1.1697217798232002 1.1093469981392354 0.9061272025350275 0.8986098170111072 1.0164528254936995 1.0707758570493995 1.0 21.130315879937285 -9.93995327738241 14.903728800295942 1.000002353032444 1.0111241626882925 0.0016810152817765545 0.0817283551214386 0.0 0.0 0.08638924237560944 0.020952468895983702 1.1482771497261307e-10 9.93995327738241 0.011121809655848525 MDS(ph)DEDEKEGEEEK ddPTM_KYSE-520_SHP099_60min_R1 3 MDSDEDEKEGEEEK 14 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK;MDS(1)DEDEKEGEEEK 241.8 2.2066999999999997e-19 2008550000.0 4662110.0 3997910.0 3747380.0 4036040.0 4215630.0 4295550.0 4159120.0 4378780.0 4939840.0 4154060.0 True False 4403493.464614123 3805844.4026147514 3988942.110819994 4419624.028120327 4547376.097346389 4268739.879096629 4579564.438699551 4363591.034194939 4042889.5792326634 4117258.260209779 1.0695208282585995 0.9243637785356801 0.968834563857734 1.0734386207522337 1.1044670530613483 1.0367918671390637 1.112284959862153 1.059829322917579 0.9819373290969301 1.0 21.973252515685093 -5.260605015481505 24.99784344074549 1.0591508620117036 0.9812521258013713 0.24453107174751443 0.05120928980271527 89.74005421074288 2688571.6717097564 0.013893448979596197 0.022451529781006018 5.487758416770238e-06 5.260605015481505 -0.07789873621033228 MDS(ph)DEDEKEGEEEKVAK ddPTM_KYSE-520_SHP099_60min_R1 2 MDSDEDEKEGEEEKVAK 17 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 1 MDS(1)DEDEKEGEEEKVAK;MDS(1)DEDEKEGEEEKVAK 168.81 2.2810999999999998e-08 1970860000.0 1027270.0 1147070.0 990900.0 785800.0 891990.0 818410.0 656900.0 721610.0 1285620.0 740450.0 True False 970285.285288025 1091963.0354128291 1054774.9994960574 860482.1957406154 962184.5382711479 813301.9996162257 723305.8627261857 719106.9033350402 1052183.8158428404 733890.1890613821 1.3221123537963948 1.4879106597805984 1.4372381797950928 1.1724944801907486 1.3110742623521725 1.108206665981471 0.9855777792196223 0.9798562701250317 1.4337074286120977 1.0 19.4852046852596 -5.6712187907969005 1.191860925373724 1.0976933405820015 1.425057382861161 0.4449938048497516 0.14115346930965014 0.43097461005424126 1.282472476138918 0.05685069426809561 0.09176295239679849 2.131970588972946e-06 5.6712187907969005 0.3273640422791595 MDS(ph)FDEDLARPSGLLAQER ddPTM_KYSE-520_SHP099_60min_R1 11 MDSFDEDLARPSGLLAQER 19 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 MDS(1)FDEDLARPSGLLAQER;MDS(1)FDEDLARPSGLLAQER;MDS(1)FDEDLARPSGLLAQER;MDS(1)FDEDLARPSGLLAQER;MDS(1)FDEDLARPSGLLAQER;MDS(1)FDEDLARPSGLLAQER;MDS(1)FDEDLARPSGLLAQER;MDS(1)FDEDLARPSGLLAQER;MDS(1)FDEDLARPSGLLAQER;MDS(1)FDEDLARPSGLLAQER;MDS(1)FDEDLARPSGLLAQER 261.49 2.8541e-35 9205880000.0 2217170.0 2217760.0 2026007.0 1950228.0 1950473.0 2065064.0 2147719.0 2301330.0 2719450.0 1940866.0 True False 2094179.160281181 2111215.4806743725 2156606.652945816 2135577.08276257 2103964.128426712 2052175.1695794053 2364831.3962375154 2293347.2233644617 2225666.4317557374 1923671.437210897 1.0886366142221775 1.0974927629717228 1.1210888778764883 1.1101568809790678 1.093723225145568 1.0668012893900551 1.2293322812269074 1.192171999335579 1.1569888644719384 1.0 20.875430977379594 -6.737422977229492 24.98656118121101 1.1606376946768044 1.0980073074348597 0.12041109551217899 0.05769902556029637 344.1367366173473 358038.31202465657 0.020936041659383335 0.016207809356686875 1.8305307248635008e-07 6.737422977229492 -0.0626303872419447 MDSNFGLAGLPGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 MDSNFGLAGLPGSPK 15 0 O43463;O43463-2 O43463 SUV39H1 Histone-lysine N-methyltransferase SUV39H1 1 MDSNFGLAGLPGS(1)PK;MDSNFGLAGLPGS(1)PK;MDSNFGLAGLPGS(1)PK;MDSNFGLAGLPGS(1)PK 163.44 4.8281e-08 1873210000.0 2584820.0 2633670.0 2154830.0 2053610.0 2237900.0 2403160.0 2143320.0 2392890.0 2893770.0 2575630.0 True False 2441434.8818890774 2507144.539980735 2293733.789649901 2248784.476959638 2414009.9980907897 2388160.9870330575 2359987.7023874116 2384589.6230947236 2368334.3140053293 2552811.922009818 0.9563708398725066 0.9821109492495911 0.8985126439883022 0.8809048788792789 0.9456278299539788 0.9355021286303257 0.924465951463202 0.9341031364415388 0.9277355270813488 1.0 21.283655820669313 -10.478326704798915 6.346377940292459 1.0000336910849883 0.9310949757437189 0.37082108237331335 0.026677816183420966 1.3669575155343076e-05 1.1236721517547716e-06 0.027765038426016818 0.006730721553266462 3.3240939905862917e-11 10.478326704798915 -0.06893871534126939 MDY(ph)VEINIDHK ddPTM_KYSE-520_SHP099_60min_R1 2 MDYVEINIDHK 11 0 Q00341;Q00341-2;A0A024R4E5;H0Y394;H7C0A4 Q00341 HDLBP Vigilin 1 MDY(1)VEINIDHK;MDY(1)VEINIDHK 100.09 0.0024113000000000003 361730000.0 533690.0 513690.0 539370.0 454920.0 560480.0 471000.0 441410.0 547590.0 604580.0 501280.0 True False 504085.1518153611 489011.5613355909 574138.6532225132 498155.4600233143 604586.5873050299 468060.31429142127 486032.0305464545 545690.538098467 494803.5122215461 496839.04918993835 1.0145844064335061 0.9842454254207482 1.1555827871392284 1.002649572000273 1.2168660822670168 0.9420763425390198 0.9782484515637329 1.098324576114091 0.9959030253928086 1.0 18.92241904143068 MDYEDDRLR ddPTM_KYSE-520_SHP099_60min_R1 2 MDYEDDRLR 9 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 0 ; 127.4 0.00068964 2127200000.0 2144810.0 2211800.0 1619320.0 1209000.0 2266000.0 2243530.0 1595600.0 1706570.0 1887110.0 1887750.0 False True 2025833.1137272643 2105541.8080205144 1723703.9582036084 1323902.9965008956 2444321.3082236582 2229527.2970747994 1756898.8195553406 1700650.306986432 1544458.394171825 1871026.0036472743 1.082739154762263 1.12534075096556 0.9212613586575042 0.7075812917191704 1.3064069144195931 1.1916067936675827 0.93900288725573 0.9089399632454486 0.8254606783450061 1.0 20.835398178716485 -6.979116363387152 24.638734853943333 0.9051144214080502 1.049833736386049 0.1586622245528031 0.15548108889983867 402.7164419245433 475127.7678134152 0.07014307897490205 0.04728487194316168 1.049261255491749e-07 6.979116363387152 0.14471931497799884 MDYVEINIDHK ddPTM_KYSE-520_SHP099_60min_R1 1 MDYVEINIDHK 11 0 Q00341;Q00341-2;A0A024R4E5;H0Y394;H7C0A4 Q00341 HDLBP Vigilin 0 158.04 4.2821e-05 325990000.0 232040.0 239260.0 156970.0 144710.0 244680.0 220770.0 141190.0 239310.0 217710.0 180610.0 False True 219168.27863972785 227765.59046341854 167088.53736088023 158463.19489135197 263934.92396123766 219392.0925395266 155462.86308161114 238479.8894653738 178179.35202248284 179009.9359124536 1.2243358309837844 1.2723628400984923 0.9334037047116556 0.885220108501965 1.4744149402428555 1.2255861185650738 0.8684594086310473 1.3322159367846738 0.9953601240862018 1.0 17.449680140662654 -7.900296005142061 20.743764752698983 0.9970797783374737 1.1448533699612113 0.09444973597928152 0.19008967275139282 9.037233224204227 1841.839612611646 0.18603374604552086 0.04803378653255768 1.2580676495028201e-08 7.900296005142061 0.1477735916237376 MEANKENR ddPTM_KYSE-520_SHP099_60min_R1 1 MEANKENR 8 1 P16949;P16949-2 P16949 STMN1 Stathmin 0 88.948 0.0050453 304290000.0 472170.0 580360.0 233800.0 234350.0 566160.0 739490.0 320560.0 366240.0 386190.0 1406500.0 False True 445977.78885244014 552478.6344618805 248871.12209322676 256622.55354010317 610713.5709902506 734874.5686101128 352965.3331641137 364969.59892105893 316067.6310576577 1394039.5042404435 0.3199176117289701 0.3963149055542039 0.17852515752688566 0.18408556770414233 0.43808914247591857 0.5271547659695028 0.25319607664664456 0.2618072140788552 0.2267278869043746 1.0 20.410840014149052 -10.469396527815611 3.081631294739289 1.0158975578152134 0.3116655231076165 0.7860498609524188 0.10806206398126933 44228530.61747779 53790949.097297676 6052046.4884359315 0.030856150851580617 3.3931532297809905e-11 10.469396527815611 -0.7042320347075969 MEDGEFWMSFR ddPTM_KYSE-520_SHP099_60min_R1 2 MEDGEFWMSFR 11 0 P07384 P07384 CAPN1 Calpain-1 catalytic subunit 0 ; 191.4 5.7502e-06 207706000.0 418430.0 325000.0 237810.0 263810.0 337760.0 289440.0 272690.0 264560.0 306490.0 284200.0 False True 395218.85378047486 309386.51216505433 253139.6131094534 288882.42308263126 364339.7904084837 287633.49759768316 300256.16639793525 263642.3031087682 250839.1419841572 281682.20910425397 1.4030664380163236 1.0983530452594068 0.8986709310269695 1.0255614793751933 1.2934426762949631 1.021127669057816 1.0659394050932298 0.935956530400509 0.8905040285711429 1.0 18.103708921189767 -4.294461796740834 3.6574783022342863 1.0249650984611252 1.4325933126732973 0.531719327258531 0.10820539130644198 0.2041765286224419 5.019727024234482 0.029261351256811976 0.21395457272552218 5.0761939044173635e-05 4.294461796740834 0.4076282142121721 MEDTLEHT(ph)DKEVSVETVSILSK ddPTM_KYSE-520_SHP099_60min_R1 1 MEDTLEHTDKEVSVETVSILSK 22 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 MEDT(0.43)LEHT(0.49)DKEVS(0.079)VETVSILSK 98.565 0.0030101 129420000.0 151030.0 140080.0 139140.0 170780.0 116460.0 118640.0 132800.0 177410.0 176010.0 146270.0 True False 142652.06482915938 133350.34653563343 148109.18703187158 187010.8798531208 125624.73943324255 117899.52375272661 146224.7200031019 176794.60611780532 144051.02085102774 144974.1615963381 0.9839826853170961 0.9198214707178671 1.0216247185085474 1.289960071463138 0.8665319257581119 0.8132450807406818 1.008626077867902 1.2194904538235383 0.9936323774171517 1.0 17.145436269445845 -7.019881106800102 24.825760743123087 1.0867485108229982 0.9835544686783115 0.07824751134198604 0.132631715955704 1769.2863139940953 2209320.8973128055 0.06502141907295707 0.03822651471962879 9.552540622140294e-08 7.019881106800102 -0.10319404214468664 MEEEQHHWDDR ddPTM_KYSE-520_SHP099_60min_R1 3 MEEEQHHWDDR 11 0 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 0 ;; 196.57 5.807399999999999e-07 450966700.0 261379.8 301951.1 216272.7 212141.8 304078.7 287444.4 251266.8 311837.1 267695.4 233378.3 False True 246880.54144628675 287444.9159181585 230213.98429055503 232303.69288924185 328007.96371886606 285650.35287751374 276667.30027165206 310755.4098834264 219088.66341187517 231310.74982756982 1.0673111458517315 1.2426785877112663 0.9952584757179147 1.004292680138784 1.4180402941211292 1.2349203532064605 1.1960849224599082 1.3434542498136315 0.9471616151657215 1.0 17.819472789103294 -4.220390827762125 21.199243403905083 1.1668038693049128 1.0673091476409922 0.021063500437942806 0.15410492255540542 12488.940051654787 6448852.901878356 0.03833251350643329 8.218291487757298 6.0201757807607906e-05 4.220390827762125 -0.0994947216639206 MEEEQHHWDDRR ddPTM_KYSE-520_SHP099_60min_R1 2 MEEEQHHWDDRR 12 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 0 ; 113.24 0.00017433 157248000.0 39265.7 40100.8 44360.0 46967.0 44138.0 36672.0 40696.0 43115.0 53151.0 23645.9 False True 37087.55334676765 38174.29737547206 47219.51657850954 51430.72955885654 47611.40948913325 36443.11644521231 44809.94883468546 42965.444128116644 43500.1182276744 23436.41572223182 1.5824754854295549 1.628845375842171 2.014792583394782 2.1944793166503387 2.0315141211618375 1.554978238871327 1.9119796032709335 1.833277094814441 1.8560909118201945 1.0 14.516464325795985 -11.100349679310629 0.6754762341675072 1.034904267142132e-09 1.8555462598162291 0.6215932615720303 0.1977540250729025 196.53026061299812 19.351913400431304 301.2853370010482 0.08021857930298695 7.936889257541221e-12 11.100349679310629 1.855546258781325 MEEFKDQLPADECNK ddPTM_KYSE-520_SHP099_60min_R1 1 MEEFKDQLPADECNK 15 1 P38646 P38646 HSPA9 Stress-70 protein, mitochondrial 0 199.41 2.4293e-11 902910000.0 1445600.0 1723700.0 979380.0 957130.0 1866900.0 1859700.0 1304300.0 1459400.0 1526100.0 1475200.0 False True 1365409.6862678432 1640890.8646735516 1042512.4018634064 1048095.3474283726 2013814.408792036 1848092.92247931 1436151.3727413078 1454337.6820265197 1248998.709850312 1462130.8756882343 0.9338491573985374 1.1222599098053885 0.7130089509755336 0.716827313379199 1.3773147412977793 1.2639722976983172 0.9822317527254886 0.9946699753139087 0.8542318137303545 1.0 20.479641022376327 -5.7345006498514906 24.999966960213122 1.0829071399301877 0.8780790292979944 0.2475267532293285 0.17678602291013248 363.9289454510351 337735.5649153492 0.057038951909293624 0.07361748870452416 1.8428897313819023e-06 5.7345006498514906 -0.2048281106321933 MEGAEINKS(ph)LLALK ddPTM_KYSE-520_SHP099_60min_R1 2 MEGAEINKSLLALK 14 1 Q99661-2;Q99661 Q99661-2 KIF2C Kinesin-like protein KIF2C 1 MEGAEINKS(1)LLALK;MEGAEINKS(1)LLALK 110.74 0.00011088 1328090000.0 786230.0 951110.0 748940.0 962540.0 838240.0 661430.0 610650.0 691680.0 851840.0 772220.0 True False 742616.2545893525 905417.2479547851 797217.8707463685 1054019.512201796 904204.7190668128 657301.7700249988 672380.461369684 689280.7235193256 697167.3291389095 765378.7315780696 0.970259851692266 1.1829663023010608 1.0415991950843113 1.377121506928475 1.1813820815251943 0.8587928340649915 0.8784937882757202 0.9005747025373386 0.9108788895942785 1.0 19.545814286243893 -6.258679304490476 24.97697076518197 0.9015805663444542 1.158981886937811 0.567217844849183 0.10497345951769146 175.11235735203155 1584663.5309583717 0.035879739065975344 0.034348655805734415 5.512145788247397e-07 6.258679304490476 0.25740132059335685 MEHYT(ph)SRDMDELLAEIQK ddPTM_KYSE-520_SHP099_60min_R1 1 MEHYTSRDMDELLAEIQK 18 1 H3BUS3;A6NCI4 H3BUS3 VWA3A von Willebrand factor A domain-containing protein 3A 1 MEHYT(0.5)S(0.5)RDMDELLAEIQK 63.69 0.051883000000000006 8002600000.0 8271800.0 7195000.0 7144000.0 6745800.0 7754300.0 7467100.0 7802300.0 7612500.0 10034000.0 7713100.0 True False 7812946.764575502 6849341.40008482 7604513.670804148 7386918.803801273 8364519.294068278 7420495.059119885 8591032.62710995 7586094.01427086 8212078.536555942 7644767.934700993 1.0219992066876373 0.8959515133212105 0.9947344034193473 0.9662711630879866 1.0941495367178122 0.9706632199307068 1.1237793874832602 0.9923249572869568 1.074209002379238 1.0 22.866041276987744 -5.732105188536763 24.291246983988422 1.0426072839367413 0.9662538219721319 0.3067278709977912 0.05350227373841477 173.24377645876712 143459.77095476902 0.014583337086969175 0.01882341646416642 1.8530827421190602e-06 5.732105188536763 -0.07635346196460935 MEIGDTLSTAEESS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 1 MEIGDTLSTAEESSPPK 17 0 Q9BYW2;C9JG86;Q9BYW2-3;Q9BYW2-2 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 MEIGDTLSTAEES(0.017)S(0.983)PPK 200.77 1.0735e-12 436630000.0 750290.0 859970.0 598860.0 560740.0 566470.0 826600.0 634380.0 859080.0 945500.0 889800.0 True False 708669.9180339655 818655.7503587133 637463.4738098787 614032.5610073713 611047.966226592 821440.882788298 698509.3213521659 856100.051990779 773821.0341153713 881917.064253924 0.8035561922520227 0.928268409287751 0.7228156701437161 0.6962475111271658 0.6928632985954531 0.9314264527619872 0.792035158025981 0.9707262583869092 0.8774306173222777 1.0 19.750283465122774 -7.099977922410798 1.0870486105783186 0.9614156121347224 0.7797158077540469 0.4136190692026458 0.08384645415608885 0.5699933334225582 1.2235501015168426 0.07294777430763555 0.031633447547015144 7.943686158457173e-08 7.099977922410798 -0.18169980438067546 MEIQVPPS(ph)PTDVAK ddPTM_KYSE-520_SHP099_60min_R1 3 MEIQVPPSPTDVAK 14 0 Q5T5U3;A0A087WW76;A0A452Q6Z5;E7ESW5;Q5T5U3-3;A0A1B0GV73 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 MEIQVPPS(0.921)PT(0.079)DVAK;MEIQVPPS(0.939)PT(0.061)DVAK;MEIQVPPS(0.961)PT(0.039)DVAK 114.29 0.0010218 231460000.0 1080020.0 1249490.0 953740.0 792040.0 912380.0 1437600.0 1067420.0 1368000.0 1626010.0 1448210.0 True False 1020109.1376335057 1189462.6248772743 1015219.606437955 867315.243464491 984179.1152679189 1428627.4051493567 1175325.2306152913 1363254.7272936015 1330767.5723764545 1435379.9860903295 0.7106892582584118 0.8286743833715545 0.7072828214661108 0.6042408643490103 0.685657543511258 0.995295614397296 0.8188251487444992 0.9497518012681911 0.9271186621468668 1.0 20.453001279381294 -6.254176524237087 24.915277502266132 0.9275969157624151 0.7083240286954883 0.7344357230626872 0.06927168031845073 315.07487313273094 1080867.129719473 0.0242633929437855 0.02379015507465986 5.569593200757066e-07 6.254176524237087 -0.21927288706692682 MEITIRNS(ph)PYR ddPTM_KYSE-520_SHP099_60min_R1 6 MEITIRNSPYR 11 1 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;Q9UQ88-9;A0A087WYI9;A0A087X1I0 P21127 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 MEITIRNS(1)PYR;MEITIRNS(1)PYR;MEIT(0.004)IRNS(0.996)PYR;MEITIRNS(1)PYR;MEIT(0.004)IRNS(0.996)PYR;MEIT(0.052)IRNS(0.934)PY(0.014)R 180.27 1.2148e-05 8780290000.0 3924510.0 4003500.0 3935410.0 3469080.0 3515040.0 3213010.0 3179030.0 3240930.0 4580530.0 3080560.0 True False 3706809.606983277 3811165.850623988 4189092.8254786334 3798780.320183068 3791653.6501582055 3192956.4127844544 3500397.376742924 3229687.9702687473 3748821.2177646584 3053268.635039417 1.2140463385513482 1.2482248718265128 1.3720027047094574 1.244168389439479 1.2418342777458413 1.0457502416072977 1.1464426472575135 1.0577804825964987 1.2278058912809229 1.0 21.54192309676256 -6.1366564576064055 4.841106368663602 1.102825958644888 1.271848088931703 0.5951995202010052 0.06951962506043749 0.1643553631848037 5.791167910973099 0.02261758991417422 0.022702402949419484 7.300347653942915e-07 6.1366564576064055 0.1690221302868149 MEITIRNS(ph)PYRR ddPTM_KYSE-520_SHP099_60min_R1 1 MEITIRNSPYRR 12 2 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;Q9UQ88-9;A0A087WYI9;A0A087X1I0 P21127 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 MEIT(0.001)IRNS(0.997)PY(0.002)RR 56.793 0.040288 382590000.0 389960.0 405370.0 329580.0 219290.0 286820.0 273040.0 194970.0 252390.0 383450.0 202810.0 True False 368328.1414340125 385895.41672722506 350825.2541466447 240131.2556680575 309391.1022174361 271335.85608095425 214679.4703238312 251514.51799826906 313825.1459878792 201013.26118379246 1.8323574239076645 1.9197510375914417 1.745284127428163 1.1946040487771514 1.539157667486179 1.349840575109439 1.0679866047620774 1.2512334585144698 1.5612161314120436 1.0 17.616931156005194 -5.15038378021505 4.158335877242056 1.296084018484044 1.8674501311344154 0.6886144902096214 0.1708511303064333 0.13202154961582063 3.8810459362451604 0.04722066753638782 0.08583490567743102 7.073204585161614e-06 5.15038378021505 0.5713661126503713 MELQEIQLK ddPTM_KYSE-520_SHP099_60min_R1 2 MELQEIQLK 9 0 J3KN67;A0A2R2Y2Q3;P06753;P06753-7;A0A494C0P6;P06753-5;P06753-2;A0A087WWU8;P06753-6;P06753-4;P06753-3 J3KN67;P06753-5;P06753-4 TPM3 Tropomyosin alpha-3 chain 0 ; 136.57 0.0035499000000000004 56000000.0 176750.0 227723.0 158589.0 127512.0 210106.0 246925.0 170797.0 185452.0 183694.0 205407.0 False True 166945.3251576104 216782.8452608081 168811.90069137176 139630.70214211923 226640.14686038822 245383.84948282174 188062.82757808565 184808.71029682198 150339.80014890461 203587.25378422794 0.8200185525099105 1.0648154107455348 0.8291869827483755 0.6858518868283714 1.1132334792461658 1.2053006508103496 0.9237455885986071 0.907761693630838 0.7384538931314547 1.0 17.635287714249635 -4.0182852536987905 15.258806878015797 0.9398538726086272 0.7569988610817932 0.05226967453936804 0.15439265834172497 1634683.1909901267 65516875.75069337 0.04089444116446702 3793874.6907385373 9.587706840197074e-05 4.0182852536987905 -0.18285501152683403 MENGVLGNALEGVHVEEEEGEKT(ph)EDESLVENNDNIDEEAR ddPTM_KYSE-520_SHP099_60min_R1 1 MENGVLGNALEGVHVEEEEGEKTEDESLVENNDNIDEEAR 40 1 P49321-4;P49321;P49321-3;E9PPR5;E9PNB5 P49321-4 NASP Nuclear autoantigenic sperm protein 1 MENGVLGNALEGVHVEEEEGEKT(1)EDESLVENNDNIDEEAR 234.75 5.9443e-31 227340000.0 56832.0 51554.0 39557.0 49869.0 51664.0 51485.0 44335.0 44953.0 53049.0 52752.0 True False 53679.41566821674 49077.268455868354 42106.907513437814 54608.534766338445 55729.66287205079 51163.66301760894 48816.814467903 44797.06853510906 43416.63885646366 52284.65832043499 1.0266762257340145 0.9386552390777878 0.8053396324286719 1.044446622021726 1.0658893959008497 0.9785597661180867 0.9336737780463488 0.8567918386415184 0.8303896449007616 1.0 15.674100063842651 -7.011869420004244 3.944797510699554 0.8834207023968625 0.9736954950777497 0.16796338506193276 0.07942783656807727 0.38424099778089826 13.466298801048952 0.040116433338828236 0.023916153151679623 9.73039745168349e-08 7.011869420004244 0.09027479268088712 MEPQS(ph)PGEVKK ddPTM_KYSE-520_SHP099_60min_R1 4 MEPQSPGEVKK 11 1 Q03112-8;Q03112;Q03112-3;E7EUL6;A0A0C3SFZ7;Q03112-5;Q03112-6;Q03112-1;Q03112-4;H9KVD4 Q03112-8 MECOM MDS1 and EVI1 complex locus protein EVI1 1 MEPQS(1)PGEVKK;MEPQS(1)PGEVKK;MEPQS(1)PGEVKK;MEPQS(1)PGEVKK 190.27 2.1983000000000003e-05 1089900000.0 2333120.0 2343300.0 2131490.0 2063530.0 2135130.0 2232560.0 2411210.0 2597340.0 2990880.0 2623720.0 True False 2203697.1826405865 2230724.3506349893 2268889.2559045814 2259647.270777083 2303152.5837721033 2218625.7649139194 2654958.637941862 2588330.4337637126 2447811.585949214 2600475.8820232702 0.8474207347487589 0.8578138970854058 0.8724900206108808 0.8689360614331061 0.885665812051355 0.853161446430237 1.020951071415514 0.9953295285899333 0.9412937081518797 1.0 21.310344227121092 -6.755880321384564 24.999999945963417 0.9890043773886971 0.8655167910468191 0.8938272225819914 0.021127181590697337 41.14010953705914 185014.75685349284 0.008332645348422183 0.006269216124321952 1.754363885635182e-07 6.755880321384564 -0.12348758634187795 MEREDS(ph)S(ph)EEEEEEIDDEEIER ddPTM_KYSE-520_SHP099_60min_R1 2 MEREDSSEEEEEEIDDEEIER 21 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 2 MEREDS(1)S(1)EEEEEEIDDEEIER;MEREDS(1)S(1)EEEEEEIDDEEIER 170.98 1.9896e-12 945360000.0 880970.0 790420.0 795340.0 741300.0 836700.0 805340.0 739040.0 780610.0 958220.0 825720.0 True False 832100.8379298438 752447.0367553926 846608.8889889929 811752.9291200272 902543.5298282155 800313.574334295 813749.3755353346 777902.2461057437 784231.4027604784 818404.7632004395 1.0167350867752096 0.9194069616761347 1.0344623187165465 0.9918721953005262 1.1028082562700936 0.9778945704135477 0.994311631756761 0.9505104088882531 0.9582439375030964 1.0 19.642455016178967 -9.573956676150488 7.626783444311347 0.9999999999510473 0.9944118366521526 0.0013366908557591595 0.04795061611447993 0.0 0.0 0.04736739179786805 0.011488279890442444 2.6671247152113727e-10 9.573956676150488 -0.005588163298894666 MES(ph)EGGADDS(ph)AEEGDLLDDDDNEDRGDDQLELIKDDEK ddPTM_KYSE-520_SHP099_60min_R1 10 MESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEK 38 2 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4 P07910;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 MES(1)EGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(1)EGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(1)EGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(1)EGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(1)EGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(1)EGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(1)EGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(1)EGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(1)EGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(1)EGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK 306.71 1.9087999999999997e-67 24620323000.0 5679612.0 4759722.0 4204328.0 5034297.0 4760412.0 4919201.0 5450601.0 5500461.0 5360514.0 4937176.0 True False 5364552.600334177 4531057.810631627 4475345.710042642 5512755.073263418 5135029.34136082 4888498.4418740375 6001600.94181948 5481381.1846082425 4387179.785161218 4893436.461704801 1.096275111021927 0.9259459780648861 0.9145609113484837 1.1265610816458533 1.0493708013880807 0.9989908891492906 1.2264593581191838 1.1201496591413 0.8965437314849265 1.0 22.222416536553446 -5.261886540356865 24.99997177440119 1.0687165524061837 0.9736291993906213 0.12516093873718426 0.09554072230401595 73.69961072315839 4120590.561787857 0.026764703857783057 0.04254050959535909 5.4715888974749535e-06 5.261886540356865 -0.09508735301556237 MES(ph)EGGADDSAEEGDLLDDDDNEDRGDDQLELIK ddPTM_KYSE-520_SHP099_60min_R1 2 MESEGGADDSAEEGDLLDDDDNEDRGDDQLELIK 34 1 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4 P07910;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 MES(0.98)EGGADDS(0.02)AEEGDLLDDDDNEDRGDDQLELIK;MES(0.92)EGGADDS(0.08)AEEGDLLDDDDNEDRGDDQLELIK 94.19200000000001 0.00011502 491580000.0 227984.0 223431.0 164478.0 225874.0 244792.0 201404.0 175411.0 197127.0 248057.0 211365.0 True False 215337.27304516334 212697.03938323146 175080.51505410488 247340.99704850584 264055.73772404506 200146.96292897972 193143.2557263861 196443.21244678783 203016.10180809832 209492.47053948144 1.0278998213665171 1.0152968211005278 0.8357365522648166 1.1806677176108407 1.2604545501996 0.9553897684893623 0.9219579836402085 0.9377101331656962 0.969085434360933 1.0 17.676538866759724 -6.471006797848028 24.99736847574033 0.9500933876098341 1.0603855958575958 0.20281614683217264 0.10575783896751371 615.649209300088 296684.7720118462 0.04074990267203151 0.03593765426705192 3.3805954464578426e-07 6.471006797848028 0.11029220824776176 MES(ph)HS(ph)EDEDLAGAVGGLGWNSR ddPTM_KYSE-520_SHP099_60min_R1 3 MESHSEDEDLAGAVGGLGWNSR 22 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2;K7EIM4 K7ESM2 HEXIM2 Protein HEXIM2 2 MES(1)HS(1)EDEDLAGAVGGLGWNSR;MES(1)HS(1)EDEDLAGAVGGLGWNSR;MES(1)HS(1)EDEDLAGAVGGLGWNSR 206.94 3.7e-15 770960000.0 572560.0 500820.0 451240.0 422235.0 486775.0 458140.0 441745.0 474498.0 553980.0 454510.0 True False 540798.9554299371 476759.85545385355 480327.6524095277 462364.08745041786 525081.4231291142 455280.57832159573 486400.89561573917 472852.0771866661 453391.1966993489 450483.3950034293 1.200485881229474 1.0583294761624327 1.0662494061648402 1.02637320837741 1.1655955112954097 1.010648968133731 1.0797310200790784 1.049654842845132 1.0064548476773432 1.0 18.781114403144407 -4.260973384141148 6.375933887059326 1.05565620220348 1.2036301819605424 0.48322315297631824 0.04606097218907295 0.10478715394947521 24.462482848979988 0.010951475660560999 0.06699708971928306 5.4831056725772683e-05 4.260973384141148 0.14797397975706228 MES(ph)SFGS(ph)PSKQESSESLPK ddPTM_KYSE-520_SHP099_60min_R1 1 MESSFGSPSKQESSESLPK 19 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 2 MES(0.501)S(0.501)FGS(0.861)PS(0.137)KQESSESLPK 68.55199999999999 0.009942900000000001 621460000.0 1098900.0 974110.0 901020.0 848450.0 1060800.0 909530.0 854080.0 970860.0 1293400.0 1079100.0 True False 1037941.8263971593 927312.2934310802 959101.1908829729 929086.4329042063 1144278.9248736345 903853.2858969766 940418.7414175387 967492.313260427 1058551.1639606804 1069540.0135270962 0.9704562833271347 0.8670197296995165 0.8967417569727741 0.8686785170760406 1.0698794906233255 0.8450859944138761 0.8792740145515965 0.9045873001701549 0.9897256302453078 1.0 20.028559026803524 -7.782541525438989 7.164034536746532 0.9961963856841063 0.9110176166222554 0.22030955326445956 0.06176279235662054 0.2652876779529885 54.30242237055005 0.05440615479568995 0.015367974786696919 1.6499032368663313e-08 7.782541525438989 -0.08517876906185085 MESAECLEMTYVPNIDRIS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 2 MESAECLEMTYVPNIDRISPEK 22 1 H0YC63;Q9ULD2-5;Q9ULD2-2;Q9ULD2 H0YC63 MTUS1 Microtubule-associated tumor suppressor 1 1 MESAECLEMT(0.027)Y(0.002)VPNIDRIS(0.971)PEK;MESAECLEMTYVPNIDRIS(1)PEK 161.39 1.3387000000000001e-09 161363000.0 66815.0 85620.0 52623.0 68131.0 61986.0 67180.0 53425.0 71557.0 94152.0 75093.0 True False 63108.6387575996 81506.68668175992 56015.162779777 74606.1497556679 66863.94554790463 66760.70470084423 58825.720377753874 71308.78546852942 77056.37017877372 74427.73444146992 0.847918309366629 1.0951117522710154 0.7526114183124492 1.0023971616970053 0.8983740543719833 0.8969869256647192 0.7903736533054692 0.9580942642370331 1.0353179598577056 1.0 16.183552700953026 -7.521069157701072 17.069313452704705 1.0106788608882282 0.9016167173511659 0.21290030127550552 0.09263434416859144 1.9592387418159287 18584.363940167023 0.05658877804748613 0.02264521584525432 3.012526266812419e-08 7.521069157701072 -0.10906214353706234 MESEGGADDS(ph)AEEGDLLDDDDNEDRGDDQLELIK ddPTM_KYSE-520_SHP099_60min_R1 2 MESEGGADDSAEEGDLLDDDDNEDRGDDQLELIK 34 1 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4 P07910;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 MES(0.005)EGGADDS(0.995)AEEGDLLDDDDNEDRGDDQLELIK;MES(0.162)EGGADDS(0.838)AEEGDLLDDDDNEDRGDDQLELIK 201.9 4.7186e-16 850840000.0 152724.0 133957.0 94062.0 77558.0 116953.0 155529.0 124213.0 141695.0 170253.0 134877.0 True False 144252.09527225382 127521.50464644373 100125.38702452132 84929.08900133698 126156.53572845628 154558.28582044676 136769.66224205794 141203.4931168616 139339.34692886783 133682.09471271798 1.0790681847277357 0.9539161165935249 0.74898128458931 0.6353063900131808 0.94370555757348 1.1561629562477427 1.0230963431263933 1.0562633194842364 1.0423186981645316 1.0 17.028446719232015 -6.002433185082822 24.99984234015152 1.056264020713737 0.8458578262532437 0.4018366848876933 0.11585363233168901 103.74602671302749 1065961.1635518917 0.03932702243298337 0.04384848988081673 9.94413049681782e-07 6.002433185082822 -0.21040619446049336 MESEGGADDS(ph)AEEGDLLDDDDNEDRGDDQLELIKDDEK ddPTM_KYSE-520_SHP099_60min_R1 22 MESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEK 38 2 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4 P07910;P07910-2 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 MES(0.012)EGGADDS(0.988)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(0.044)EGGADDS(0.956)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(0.002)EGGADDS(0.998)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(0.015)EGGADDS(0.985)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(0.004)EGGADDS(0.996)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQLELIKDDEK;MES(0.007)EGGADDS(0.993)AEEGDLLDDDDNEDRGDDQLELIKDDEK 402.27 9.364399999999998e-116 242529263000.0 14877635.2 12501259.1 10772869.3 13504001.3 12559707.2 12684735.6 14723696.1 13962608.8 14530986.7 12168995.8 True False 14052343.117625529 11900679.848063545 11467305.692278316 14787417.52342595 13548084.701681443 12605565.459956635 16212110.991214333 13914175.76897019 11892525.811645383 12061187.964547472 1.1650878138149274 0.9866921801603853 0.9507608807677315 1.2260332536804772 1.1232794598263902 1.0451346498379182 1.3441554048297764 1.1536322798276066 0.986016124332209 1.0 23.523868676437505 -5.258267508969257 24.95007718407959 1.1375398035726016 1.0294314855816755 0.11378203133964904 0.11305623403847875 512.4969624080281 4031302.919587624 0.031177912120168315 0.05118905756616216 5.517374851762728e-06 5.258267508969257 -0.10810831799092613 MESEGGADDS(ph)AEEGDLLDDDDNEDRGDDQVK ddPTM_KYSE-520_SHP099_60min_R1 7 MESEGGADDSAEEGDLLDDDDNEDRGDDQVK 31 1 B4DY08 B4DY08 HNRNPC 1 MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK;MESEGGADDS(1)AEEGDLLDDDDNEDRGDDQVK 318.71 1.4694999999999996e-65 15090430000.0 8699800.0 7929550.0 7356390.0 7563650.0 7950430.0 7965250.0 7659920.0 8510870.0 10287300.0 8024850.0 True False 8217204.751378667 7548602.515502801 7830594.670040164 8282497.021905697 8576083.609241229 7915535.920190534 8434259.467215054 8481347.778421996 8419385.641729318 7953756.072238829 1.033122549490719 0.9490613550307201 0.9845153156470893 1.0413315352747967 1.0782432263889161 0.9951947040239647 1.060412136179702 1.0663323970953336 1.0585420982566571 1.0 22.923204887216908 -5.274624415785648 6.181557803378344 1.0460166804919053 0.9847074416283689 0.3718970646483316 0.031845450642308745 0.14522879599309046 24.930267500386115 0.008662606687005157 0.013641353780493349 5.313437594388682e-06 5.274624415785648 -0.06130923886353645 MESMNRPYTSLVPPLS(ph)PQPK ddPTM_KYSE-520_SHP099_60min_R1 4 MESMNRPYTSLVPPLSPQPK 20 1 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 MESMNRPYTSLVPPLS(1)PQPK;MESMNRPY(0.001)T(0.001)S(0.001)LVPPLS(0.998)PQPK;MESMNRPYT(0.001)S(0.001)LVPPLS(0.997)PQPK;MESMNRPYTSLVPPLS(1)PQPK 95.71 0.00079596 4348920000.0 1830830.0 2022990.0 1564130.0 1550220.0 1618470.0 2478440.0 2138660.0 2647250.0 3202830.0 2530520.0 True False 1729270.2102308804 1925802.5238301014 1664956.3224964857 1697552.4427093612 1745834.3811653764 2462971.136629362 2354856.6241101935 2638067.307622797 2621276.808773919 2508101.56151477 0.6894737584655408 0.7678327518232599 0.6638313009505619 0.6768276328029248 0.6960780248910567 0.9820061413868139 0.9389000271137249 1.0518183745436265 1.0451238693822258 1.0 21.258164338248445 -6.282048571339645 4.806890563504573 1.0056962296642578 0.6982250541143613 0.9395117100829876 0.038690483403025874 0.047621426097030024 3.06219854312052 0.014728280127504644 0.013463346303802722 5.223377676630117e-07 6.282048571339645 -0.30747117554989645 MESS(ph)FGS(ph)PSKQESSESLPK ddPTM_KYSE-520_SHP099_60min_R1 2 MESSFGSPSKQESSESLPK 19 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 2 MES(0.169)S(0.826)FGS(0.801)PS(0.134)KQES(0.032)S(0.03)ES(0.009)LPK;MES(0.147)S(0.853)FGS(0.989)PS(0.011)KQESSESLPK 144.22 1.5530000000000002e-06 2321630000.0 2090340.0 1866370.0 1703780.0 1812850.0 1864330.0 1769860.0 1526700.0 1869200.0 2371230.0 1791820.0 True False 1974384.6732105208 1776706.7837215161 1813608.3849443863 1985142.7189467743 2011042.1644133332 1758813.6472437656 1681033.7351561403 1862716.1814745574 1940674.4058438838 1775945.8688148677 1.1117369666948667 1.0004284561370984 1.0212070180689976 1.1177946095122306 1.1323780751016645 0.9903531848172068 0.946556854392153 1.048858647205049 1.0927553817498634 1.0 20.76015617804907 -6.287888878162068 24.892251143768615 1.0144367313855704 1.0716703187565917 0.24831699057041212 0.05268297983856422 1249.3555189033475 1175793.379725024 0.02023351543277559 0.017848737740664117 5.153604917075253e-07 6.287888878162068 0.057233587371021244 MESSFGS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 4 MESSFGSPSK 10 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 MESSFGS(0.993)PS(0.007)K;MESSFGS(1)PSK;MESSFGS(0.999)PS(0.001)K;MESSFGS(0.973)PS(0.027)K 242.97 1.0724e-13 3018720000.0 5223700.0 4328460.0 3779110.0 4319880.0 4486250.0 4628800.0 4746810.0 4929380.0 4616130.0 4399730.0 True False 4933930.947812219 4120514.2844490856 4022717.4773897864 4730440.096380717 4839292.3517292105 4599909.942233825 5226663.879201233 4912281.131305935 3777957.1551676267 4360751.815138147 1.1314404389363109 0.9449091484970348 0.9224825552844144 1.0847762718252423 1.1097380811560593 1.0548433245536817 1.1985694441626127 1.1264757407778125 0.8663545451159647 1.0 22.05614545351616 -3.9315839329604483 18.386271093580415 1.0440494022341917 2.7141309967156904 0.07449318210802791 0.09740833338565244 329.62225790973434 116970.46234535599 0.02465481373429436 7077.536991934157 0.00011706203431112263 3.9315839329604483 1.6700815944814986 MESSFGS(ph)PSKQESSESLPK ddPTM_KYSE-520_SHP099_60min_R1 8 MESSFGSPSKQESSESLPK 19 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 MES(0.092)S(0.36)FGS(0.451)PS(0.097)KQESSESLPK;MES(0.047)S(0.254)FGS(0.554)PS(0.127)KQES(0.009)S(0.009)ES(0.001)LPK;MESSFGS(0.813)PS(0.187)KQESSESLPK;MESS(0.002)FGS(0.825)PS(0.173)KQESSESLPK;MESSFGS(0.963)PS(0.037)KQESSESLPK;MESSFGS(0.998)PS(0.002)KQESSESLPK;MESSFGS(0.931)PS(0.069)KQESSESLPK;MESSFGS(0.992)PS(0.008)KQESSESLPK 204.8 9.1542e-14 27046140000.0 9930210.0 8821190.0 7532650.0 6603320.0 6881330.0 8419040.0 7204690.0 8012180.0 10078360.0 7891510.0 True False 9379361.455917135 8397406.79152386 8018216.671666139 7230897.5474394495 7422851.521588127 8366493.648475684 7933010.376198395 7984387.617636861 8248383.8787805345 7821597.360901868 1.1991618876729866 1.0736178818792583 1.0251379995277077 0.9244783659645824 0.9490198969705386 1.0696656018497719 1.0142442790335198 1.0208129170070477 1.0545651352512802 1.0 22.899031840452402 -4.348081519943604 2.048829966872509 1.0052232061769892 1.2333460001010739 0.6725884371079209 0.04108279314755451 0.3703726994226135 1.9745639966313264 0.012122295770789366 0.147117509535286 4.48661165363616e-05 4.348081519943604 0.22812279392408463 METVSNASSSSNPSS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 10 METVSNASSSSNPSSPGR 18 0 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 METVSNASSSSNPSS(1)PGR;METVSNASSSSNPS(0.002)S(0.998)PGR;METVSNASSSSNPS(0.041)S(0.959)PGR;METVSNASSSSNPS(0.001)S(0.999)PGR;METVSNASSSSNPSS(1)PGR;METVSNASSSSNPSS(1)PGR;METVSNASSSSNPS(0.002)S(0.998)PGR;METVSNASSSSNPSS(1)PGR;METVSNASSSSNPS(0.045)S(0.955)PGR;METVSNASSSSNPS(0.014)S(0.986)PGR 424.13 6.5227999999999984e-108 6555810000.0 5640080.0 7616090.0 5284630.0 4516710.0 4728000.0 6655610.0 5365870.0 6782730.0 7180780.0 7046000.0 True False 5327213.519179265 7250201.604415847 5625285.705506958 4945976.760401625 5100066.701359872 6614069.869216827 5908304.505444609 6759202.292731078 5876931.364732932 6983577.921705057 0.7628200871965947 1.0381786651054783 0.8055019602521355 0.7082296232464824 0.7302942357826057 0.947089005574092 0.8460282926150958 0.9678709636393379 0.8415358761112048 1.0 22.735534936329316 -6.282280160408881 24.90172887537297 0.9138419817518286 0.8159435442015006 0.24862238562026928 0.09619368340186617 1394.917697444814 1666720.4862881752 0.035575512817997854 0.03140823902388348 5.22059303452712e-07 6.282280160408881 -0.09789843755032801 MEVDRS(ph)PGLPMSDLK ddPTM_KYSE-520_SHP099_60min_R1 22 MEVDRSPGLPMSDLK 15 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(1)PGLPMSDLK;MEVDRS(0.999)PGLPMS(0.001)DLK;MEVDRS(0.999)PGLPMS(0.001)DLK;MEVDRS(0.982)PGLPMS(0.018)DLK;MEVDRS(0.999)PGLPMS(0.001)DLK;MEVDRS(1)PGLPMSDLK 213.01 2.8214999999999996e-14 70307440000.0 31429497.0 30230138.0 29472470.0 26353862.0 27472047.0 30050938.0 30280963.0 31572358.0 42679658.0 32449869.0 True False 29686040.148261048 28777836.794117764 31372312.573819276 28858525.12090246 29633940.80433446 29863378.949112512 33342058.253759637 31462840.859141722 34930107.973823816 32162388.406276036 0.9230048394810205 0.8947667825720983 0.9754347897775344 0.8972755616392943 0.9213849553085994 0.9285186961825601 1.0366785523693696 0.9782495149832279 1.0860545408688522 1.0 24.938871210465475 -6.754528418788207 23.567088343047175 1.0234331201966715 0.9231826422158398 0.6948283074704953 0.033057851315155574 42.878105991236396 146219.58583836452 0.012140691797862105 0.009176524407362534 1.759833502375239e-07 6.754528418788207 -0.10025047798083175 MEVEDGLGS(ph)PKPEEIK ddPTM_KYSE-520_SHP099_60min_R1 4 MEVEDGLGSPKPEEIK 16 1 F8VRB8;H0YHC1;A0A3B3IS46;A0A3B3IRX3;Q71F56 F8VRB8 MED13L Mediator of RNA polymerase II transcription subunit 13-like 1 MEVEDGLGS(1)PKPEEIK;MEVEDGLGS(1)PKPEEIK;MEVEDGLGS(1)PKPEEIK;MEVEDGLGS(1)PKPEEIK 157.14 9.2346e-07 803350000.0 1404810.0 1274540.0 1036860.0 1165240.0 1276690.0 1419570.0 1329610.0 1459630.0 1492740.0 1438580.0 True False 1326882.3888806945 1213309.1852764557 1103697.654634658 1275984.0592578202 1377158.2396275671 1410709.9370672454 1464019.9545431049 1454566.8842102047 1221696.044913148 1425835.3003983044 0.9306000409093761 0.8509462382769736 0.7740709283367737 0.894902839690795 0.965860670754091 0.9893919281372584 1.0267805504142966 1.0201507031028578 0.8568283058862897 1.0 20.443375913643543 -5.683098294758055 3.3108975327011234 0.9819042703098562 0.8497074484429715 0.5005499711909076 0.05669073477896078 0.19565284061924879 4.281785231034005 0.017929199869297387 0.023299465454596706 2.074443951177055e-06 5.683098294758055 -0.13219682186688464 MEVEDGLGS(ph)PKPEEIKDFSYVHK ddPTM_KYSE-520_SHP099_60min_R1 5 MEVEDGLGSPKPEEIKDFSYVHK 23 2 F8VRB8;H0YHC1;A0A3B3IS46;A0A3B3IRX3;Q71F56 F8VRB8 MED13L Mediator of RNA polymerase II transcription subunit 13-like 1 MEVEDGLGS(1)PKPEEIKDFSYVHK;MEVEDGLGS(1)PKPEEIKDFSYVHK;MEVEDGLGS(1)PKPEEIKDFSYVHK;MEVEDGLGS(1)PKPEEIKDFSYVHK;MEVEDGLGS(1)PKPEEIKDFSYVHK 193.75 2.3357e-15 3991820000.0 1945490.0 2144530.0 1863940.0 2447780.0 2106670.0 2061490.0 1986100.0 1939020.0 2316150.0 1830760.0 True False 1837569.7914618345 2041503.559794842 1984092.554809445 2680416.2752481103 2272452.9436873524 2048623.4762391092 2186874.370468073 1932293.9921906688 1895595.5453900804 1814540.8907097266 1.0126913098900188 1.1250799418448723 1.0934405308625486 1.4771870333545978 1.252356976534445 1.1290037533614496 1.2051943175624522 1.0648941570200081 1.04466951122201 1.0 20.791173137664945 -7.426986055650873 1.9476950329717342 1.014075537209374 1.1929938275300722 0.2526042043326656 0.1171465378596968 0.5402998272464024 3.715567594723851 0.10366696876854573 0.03627075723116289 3.741226004265311e-08 7.426986055650873 0.17891829032069828 MEVEELS(ph)PLALGR ddPTM_KYSE-520_SHP099_60min_R1 1 MEVEELSPLALGR 13 0 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 MEVEELS(1)PLALGR 150.11 6.2501e-06 321520000.0 602560.0 674390.0 563850.0 408270.0 625740.0 622920.0 768700.0 710350.0 855080.0 682970.0 True False 569134.7956264198 641991.2921199731 600196.6731918986 447071.8580491482 674982.1780264223 619032.1252195582 846407.697789039 707885.9616469363 699819.0268126628 676919.4171426193 0.8407718573487302 0.9484013545215129 0.8866589700224894 0.6604506337494456 0.9971381540148835 0.9144842200458481 1.250381768278794 1.045746278981081 1.0338291517278473 1.0 19.368624574990054 -6.342651974511018 2.217261116207173 1.0813398732867052 0.8526819096217718 0.46768510658695417 0.10612727723717999 0.2736185385707035 2.6406452832454756 0.042607992408558365 0.0371800455882574 4.543055323276935e-07 6.342651974511018 -0.2286579636649334 MEVGPFSTGQES(ph)PTAENAR ddPTM_KYSE-520_SHP099_60min_R1 5 MEVGPFSTGQESPTAENAR 19 0 Q9Y4W2-3;Q9Y4W2-2;Q9Y4W2 Q9Y4W2-3 LAS1L Ribosomal biogenesis protein LAS1L 1 MEVGPFS(0.032)T(0.447)GQES(0.506)PT(0.014)AENAR;MEVGPFSTGQES(0.997)PT(0.003)AENAR;MEVGPFSTGQES(0.976)PT(0.024)AENAR;MEVGPFSTGQES(0.976)PT(0.024)AENAR;MEVGPFSTGQES(0.739)PT(0.261)AENAR 389.84 2.8665999999999993e-92 2909210000.0 3011680.0 2850370.0 2212310.0 1981300.0 2156310.0 2923200.0 2830350.0 2734080.0 2730730.0 2793590.0 True False 2844616.106764765 2713433.946707406 2354919.0424211523 2169602.1563004362 2325999.3292743866 2904955.224494018 3116469.3995540575 2724596.1146190693 2234898.268101398 2768840.965980135 1.0273670975385207 0.9799890929260665 0.8505071513154027 0.7835777435243285 0.8400624513481265 1.0491592909041276 1.125550162629462 0.9840204432451383 0.8071602145305128 1.0 21.400850761280815 -6.262522255542494 24.99801198419365 1.0004525589823337 0.8921435885595307 0.19100730003551059 0.09893872986915972 173.35419466757273 4001806.182984908 0.03732836782154728 0.034773125587880344 5.463585508673222e-07 6.262522255542494 -0.10830897042280296 MEVS(ph)QEDDKALQLLHDIR ddPTM_KYSE-520_SHP099_60min_R1 3 MEVSQEDDKALQLLHDIR 18 1 O14578-4;H7BYJ3;O14578;O14578-3 O14578-4 CIT Citron Rho-interacting kinase 1 MEVS(1)QEDDKALQLLHDIR;MEVS(1)QEDDKALQLLHDIR;MEVS(1)QEDDKALQLLHDIR 219.07 1.5507e-18 434487000.0 325517.0 324837.0 303184.0 342628.0 341503.0 323172.0 281578.0 337883.0 487917.0 272621.0 True False 307459.9231079485 309231.34292972216 322727.7257515519 375191.2621051359 368377.3432137269 321154.9636734332 310042.6521764565 336710.96273548494 399323.5721866421 270205.79003592883 1.1378731857191737 1.1444290031261142 1.194377536131403 1.3885389430598334 1.3633214268456066 1.1885569277798589 1.1474315636805217 1.2461278594019507 1.4778497978653407 1.0 18.04369906385475 -5.009892858041897 20.371591862373673 1.2678397600242703 1.1482135625470573 0.12122077019268906 0.1268479203208569 80.49034283040231 165765.6851392634 0.0336627594288092 0.06392998048590895 9.774783385157165e-06 5.009892858041897 -0.11962619747721304 MEWWSR ddPTM_KYSE-520_SHP099_60min_R1 2 MEWWSR 6 0 Q9Y266 Q9Y266 NUDC Nuclear migration protein nudC 0 ; 153.88 0.051308000000000006 4699100000.0 1948100.0 1826120.0 1266870.0 1366770.0 1945140.0 1599130.0 1498410.0 1470050.0 1441280.0 1424490.0 False True 1840035.009558931 1738390.4541379984 1348534.467263669 1496667.4098656145 2098211.451667332 1589149.236502845 1649883.9058723466 1464950.739662249 1179579.883712115 1411870.1268364484 1.303260813147073 1.2312679623253862 0.9551405909304884 1.0600602572555096 1.4861221381379859 1.1255633264680107 1.1685805050420688 1.0375959600085438 0.8354733635133835 1.0 20.429175955393337 -7.419078783062524 2.77747960515685 0.9184837576425107 1.188003949418191 0.38526872148166036 0.13922489780057232 0.31343837657000795 4.552418927359954 0.10431066517075777 0.0400387983178451 3.8099670252997655e-08 7.419078783062524 0.26952019177568043 MFGMVLEK ddPTM_KYSE-520_SHP099_60min_R1 1 MFGMVLEK 8 0 P55060-4;P55060-3;P55060 P55060-4 CSE1L Exportin-2 0 109.86 0.016712 0.0 72542.0 91431.0 42181.0 51742.0 71106.0 84731.0 56826.0 71623.0 68021.0 85830.0 False True 68517.95065110826 87038.51751927118 44900.05475198626 56659.54412320047 76701.63766220288 84202.16239963146 62570.52664831523 71374.55652993389 55670.1010698696 85069.61297472958 0.8054339058937756 1.0231446279781062 0.527803679620878 0.6660374032738519 0.9016337911985981 0.9898030501754392 0.735521468363823 0.8390135329654799 0.6544064222603989 1.0 16.376356270103965 MFPMDSKPSLLNPTGSILVS(ph)SPLKPNPLDLPQLQHR ddPTM_KYSE-520_SHP099_60min_R1 2 MFPMDSKPSLLNPTGSILVSSPLKPNPLDLPQLQHR 36 2 A0A088AWL3;O75376-2;O75376;O75376-3 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 MFPMDSKPSLLNPT(0.006)GS(0.006)ILVS(0.494)S(0.494)PLKPNPLDLPQLQHR;MFPMDSKPSLLNPT(0.001)GS(0.001)ILVS(0.537)S(0.46)PLKPNPLDLPQLQHR 81.179 0.0031245 106439000.0 55910.0 67663.0 79625.0 61044.0 65360.0 85623.0 51264.0 57149.0 69619.0 32458.0 True False 52808.56084617821 64412.36791576634 84757.7549045045 66845.60340645225 70503.46015247064 85088.5950967608 56446.26540842629 56950.76345767689 56977.94455217147 32170.447371941897 1.641523981175228 2.002221702765156 2.6346464481693124 2.0778574395814275 2.1915598293470313 2.6449304267671616 1.7545999518072304 1.7702819858000372 1.7711268946127847 1.0 14.973448378231872 -8.039175112657235 0.8437827781591173 1.0167791475331154 2.1850596519525003 0.562910643407827 0.30506674667404 0.5106680239102881 0.8199831603237447 0.30336001378798755 0.10901253304975683 9.137447345282719e-09 8.039175112657235 1.168280504419385 MFS(ph)PMEEK ddPTM_KYSE-520_SHP099_60min_R1 7 MFSPMEEK 8 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 MFS(1)PMEEK;MFS(1)PMEEK;MFS(1)PMEEK;MFS(1)PMEEK;MFS(1)PMEEK;MFS(1)PMEEK;MFS(1)PMEEK 192.12 5.2168e-06 10745080000.0 13306200.0 13086100.0 11078600.0 11832500.0 12528900.0 12476200.0 11323370.0 12277500.0 14197600.0 12563500.0 True False 12568078.560747936 12457424.113363434 11792744.28238675 12957057.242429145 13514853.15031043 12398331.407988582 12468046.745041572 12234912.21809003 11619673.732370593 12452197.16425509 1.0093061003583763 1.0004197611906875 0.9470412431501369 1.0405438551537949 1.0853388339453673 0.995674196645301 1.0012728340691537 0.9825504733583249 0.9331424469992883 1.0 23.569896989501096 -3.152190822217785 3.169754757819938 1.0004790082124833 5.45502180881714 0.004098895590402329 0.040672322593266794 21889.02642087502 452.0043647938523 0.011382406174375383 706305.7416348263 0.0007043835058436067 3.152190822217785 4.454542800604656 MFVLDEADEMLSR ddPTM_KYSE-520_SHP099_60min_R1 4 MFVLDEADEMLSR 13 0 P60842;P60842-2;J3KT12;J3QS69;J3KSZ0;J3QL43;Q14240-2;Q14240;E7EQG2;J3KTB5;J3KTN0;J3QR64;J3QLN6 P60842 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 ;;; 234.92 7.393e-15 455350000.0 299790.0 427169.0 508373.0 221492.0 378710.0 393040.0 310755.0 296124.0 406062.0 379790.0 False True 283160.051083451 406647.16004625947 541143.5370055595 242542.53308600216 408512.3224348551 390586.89156921423 342169.14807653497 295096.81495986116 332331.3767900117 376425.35607214895 0.7522342650827648 1.0802863130408196 1.4375852430669926 0.6443310185499681 1.085241245960477 1.0376210987613463 0.9089960135707539 0.7839451041212546 0.8828612935583282 1.0 18.522004285944984 -6.873071166199089 4.788430844492326 0.8702567486243193 1.0160246148498329 0.06396392406194817 0.20482700738796347 0.5480322277929246 20.587932287490176 0.08861093994615048 0.05898411425218899 1.3394571776445023e-07 6.873071166199089 0.14576786622551352 MFVSSSGLPPS(ph)PVPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 MFVSSSGLPPSPVPSPR 17 0 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 2 MFVS(0.004)S(0.004)S(0.004)GLPPS(0.988)PVPS(1)PR;MFVS(0.009)S(0.009)S(0.01)GLPPS(0.971)PVPS(1)PR 58.711999999999996 0.039924 1920540000.0 474800.0 410680.0 341250.0 237672.0 341530.0 345530.0 382220.0 376230.0 415760.0 394480.0 True False 448461.89750966616 390950.316356753 363247.5210193049 260260.27542130754 368406.4679601176 343373.419102154 420858.52770772245 374924.9459427422 340268.4644566971 390985.2141007958 1.147004749376668 0.9999107440824251 0.9290569257323882 0.6656524749148508 0.9422516623995469 0.8782260983752508 1.0764052258999883 0.9589235920468511 0.8702847375936218 1.0 18.576754524560744 -4.40500761537891 2.4555536013820065 0.9108491199579621 1.1638133654416856 0.33260714037524064 0.10092243281533085 0.4802504008781171 4.410978912656727 0.028082072715921252 0.22191881935759505 3.9354317459289965e-05 4.40500761537891 0.2529642454837234 MFVSSSGLPPS(ph)PVPSPR ddPTM_KYSE-520_SHP099_60min_R1 1 MFVSSSGLPPSPVPSPR 17 0 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 MFVSS(0.001)S(0.001)GLPPS(0.998)PVPSPR 99.021 0.00078035 0.0 175050.0 190480.0 142270.0 128320.0 156020.0 213610.0 139910.0 181230.0 235190.0 185990.0 True False 165339.6275464763 181329.05488369096 151440.95184004836 140515.49421918526 168297.88636763245 212276.78075539382 154053.46819001474 180601.3554294001 192485.424657424 184342.27329803052 0.8969165053051494 0.9836542190761204 0.821520474553388 0.7622532352739869 0.9129641473800276 1.1515360907598275 0.8356925703143134 0.9797066738860143 1.0441740855947255 1.0 17.492027421607737 -6.010146117287399 24.97167982999535 0.9951793217265497 0.8670890808897732 0.3422629629647804 0.08949343598990715 621.9481192264222 1530745.523747127 0.02936661099328124 0.03136758351632181 9.769084872517567e-07 6.010146117287399 -0.12809024083677645 MGAGLGHGMDR ddPTM_KYSE-520_SHP099_60min_R1 2 MGAGLGHGMDR 11 0 A0A087X0X3;P52272-2;P52272;M0R2T0;M0QZM1 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 ; 177.57 1.0385e-05 982070000.0 1030610.0 1059640.0 632950.0 626570.0 1033810.0 1070790.0 727150.0 880240.0 776070.0 918600.0 False True 973440.0088298997 1008733.3038479346 673750.9697558072 686119.0244148611 1115164.9654257288 1064106.8024206161 800657.4183001162 877186.6528895608 635155.2511326459 910461.9186599851 1.069171580797806 1.1079357446740716 0.7400100497859721 0.7535944231744354 1.2248342765033216 1.1687548711392182 0.8793969323599181 0.9634523255850187 0.6976186901561631 1.0 19.79623915016793 MGAPESGLAEYLFDKHTLGDS(ph)DNES ddPTM_KYSE-520_SHP099_60min_R1 13 MGAPESGLAEYLFDKHTLGDSDNES 25 1 G3V1D1;G3V192;P02794 G3V1D1 FTH1 Ferritin;Ferritin heavy chain;Ferritin heavy chain, N-terminally processed 1 MGAPESGLAEY(0.001)LFDKHT(0.127)LGDS(0.687)DNES(0.184);MGAPESGLAEYLFDKHT(0.003)LGDS(0.791)DNES(0.205);MGAPESGLAEYLFDKHTLGDS(1)DNES;MGAPESGLAEYLFDKHT(0.09)LGDS(0.455)DNES(0.455);MGAPESGLAEYLFDKHT(0.002)LGDS(0.499)DNES(0.499);MGAPESGLAEYLFDKHTLGDS(0.947)DNES(0.053);MGAPESGLAEYLFDKHT(0.002)LGDS(0.997)DNES(0.001);MGAPESGLAEYLFDKHTLGDS(1)DNES;MGAPESGLAEYLFDKHT(0.005)LGDS(0.995)DNES;MGAPESGLAEYLFDKHTLGDS(0.88)DNES(0.12);MGAPESGLAEYLFDKHTLGDS(0.577)DNES(0.423);MGAPESGLAEYLFDKHTLGDS(0.999)DNES(0.001);MGAPESGLAEYLFDKHT(0.001)LGDS(0.976)DNES(0.023) 229.96 3.0836e-22 5501214000.0 3397165.0 2807667.0 2176423.0 1341184.0 2868700.0 2073664.0 2293123.0 1757125.0 1907967.0 1221751.0 True False 3208717.4853694676 2672782.4629259175 2316718.708979923 1468649.7241183256 3094450.369329746 2060721.493789394 2524934.2515638005 1751029.94349106 1561528.2887340097 1210927.2366478955 2.649802059330898 2.2072197090262407 1.9131774716646837 1.2128306967343974 2.5554387379177657 1.7017715279853725 2.085124667402276 1.446024080140673 1.2895310646877947 1.0 20.20768074692363 -1.0000000001044467 0.07074143768493145 3.339354445252889e-09 6.135693479484616 0.5181374192697693 0.3759204592757789 218.71055110783075 1.1440126316319175 17.14709621227185 133.4317963752973 0.09999999997595027 1.0000000001044467 6.135693476145262 MGIDHK ddPTM_KYSE-520_SHP099_60min_R1 1 MGIDHK 6 0 Q9Y3I0 Q9Y3I0 RTCB tRNA-splicing ligase RtcB homolog 0 84.025 0.022994999999999998 0.0 367820.0 339490.0 244550.0 245170.0 386150.0 345780.0 273700.0 363240.0 322840.0 295390.0 False True 347416.29136900813 323180.3908151211 260314.0842938344 268470.88308695174 416537.8081070455 343621.85875942133 301368.2670545853 361980.0052208537 264220.3941341161 292773.0744099423 1.1866401719802762 1.1038596751646714 0.8891325980658362 0.9169930794627564 1.4227326366898316 1.173679852397493 1.0293578658555462 1.2363842062675734 0.9024750471559875 1.0 18.159423353190423 -2.8804819640147006 2.2984714892257103 1.0852169366744577 41.46429537212482 0.03847418104763267 0.15985018467215958 2955.854031167173 48.3136958072197 0.04338061534485802 625078.7544710225 0.0013167945972636526 2.8804819640147006 40.37907843545037 MGKIT(ph)LYEDR ddPTM_KYSE-520_SHP099_60min_R1 6 MGKITLYEDR 10 1 P07320 P07320 CRYGD Gamma-crystallin D 1 MGKIT(0.999)LY(0.001)EDR;MGKIT(1)LYEDR;MGKIT(0.999)LY(0.001)EDR;MGKIT(0.999)LY(0.001)EDR;MGKIT(0.998)LY(0.002)EDR;MGKIT(0.999)LY(0.001)EDR 72.29 0.017059 31110960000.0 8722920.0 8500800.0 8087070.0 6558670.0 7992570.0 8142020.0 7605300.0 8007060.0 9797730.0 7743350.0 True False 8239042.238890094 8092408.8080390645 8608375.471969493 7182004.024863956 8621539.78749743 8091202.6330510285 8374117.944575221 7979285.377721861 8018709.2126739295 7674749.943235132 1.0735258216656758 1.0544198661706334 1.1216489834378642 0.935796485616381 1.1233642595869642 1.0542627046999722 1.091125835566349 1.0396801767795913 1.0448170001606343 1.0 22.871688315047177 -8.11620284596762 1.4595288539481088 1.0006079976592692 1.0629761018459487 0.128047600904035 0.049697035400395544 1.173376995802622 5.2829152260015135 0.04509777315736825 0.013315674587124047 7.652391031227392e-09 8.11620284596762 0.062368104186679485 MGLLS(ph)PSGIGGVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 MGLLSPSGIGGVSPR 15 0 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 SAMD4B Protein Smaug homolog 2 2 MGLLS(0.875)PS(0.125)GIGGVS(1)PR;MGLLS(0.985)PS(0.015)GIGGVS(1)PR 195.96 3.2972e-11 358490000.0 427030.0 413680.0 411670.0 382200.0 391780.0 393640.0 404100.0 394750.0 513970.0 417180.0 True False 403341.7946367999 393806.1918536607 438206.9068952891 418524.17308737943 422610.8570767273 391183.14674665616 444950.3716359443 393380.70438534225 420646.00412932644 413484.109761129 0.9754710885257758 0.9524094942394852 1.0597914080626762 1.0121892551787832 1.0220727885307874 0.9460657314561467 1.076100292930225 0.9513804644454159 1.017320845466915 1.0 18.65747236197287 -4.717076852841454 24.99998883536423 1.009377675620071 0.9639401915098434 0.1885157071847421 0.03866726013373544 217.34371313152857 122478.36620680524 0.009315554248412926 0.02464640586598204 1.918329242692313e-05 4.717076852841454 -0.04543748411022752 MGLLS(ph)PSGIGGVSPR ddPTM_KYSE-520_SHP099_60min_R1 4 MGLLSPSGIGGVSPR 15 0 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 SAMD4B Protein Smaug homolog 2 1 MGLLS(0.937)PS(0.063)GIGGVSPR;MGLLS(0.814)PS(0.186)GIGGVSPR;MGLLS(0.955)PS(0.045)GIGGVSPR;MGLLS(0.686)PS(0.312)GIGGVS(0.003)PR 170.35 3.14e-08 1038845000.0 869217.0 855550.0 726668.0 667863.0 756915.0 1153720.0 905230.0 1231690.0 1409810.0 1316610.0 True False 820999.800268869 814448.0937932684 773510.1819899091 731336.4987196677 816479.9042427664 1146519.2055292947 996739.4825934315 1227417.5548686073 1153824.042417973 1304945.8597070815 0.6291447221060629 0.6241240490820714 0.5927527002258449 0.5604343607663764 0.62568105655053 0.878595228300622 0.7638167324559868 0.9405888725101004 0.8841930366957673 1.0 20.31555852205621 MGLLSPS(ph)GIGGVSPR ddPTM_KYSE-520_SHP099_60min_R1 1 MGLLSPSGIGGVSPR 15 0 M0QZ22;Q5PRF9;A0A087WZT0 M0QZ22 SAMD4B Protein Smaug homolog 2 1 MGLLS(0.093)PS(0.906)GIGGVSPR 128.88 0.00020141 30723000.0 129280.0 148810.0 117130.0 106200.0 119860.0 165960.0 151010.0 188360.0 217200.0 188250.0 True False 122108.58068670932 141660.94423163624 124680.38721462617 116293.2160698057 129292.30008988875 164924.18208026394 166275.56451557548 187706.62312355445 177761.9551664291 186582.25145628402 0.6544490686206518 0.7592412629066555 0.6682328369471875 0.6232812347483815 0.69295069107997 0.8839221351067545 0.8911649592487291 1.0060261448154615 0.9527270347473458 1.0 17.50945223150628 -6.45004317168167 1.8189124525600322 0.9715786517641977 0.6761650401722157 0.9097984473456407 0.04271551563936504 0.1025108775850138 0.6764002734469517 0.02007006679262528 0.016008333135745473 3.5477812023982373e-07 6.45004317168167 -0.295413611591982 MGLS(ph)MER ddPTM_KYSE-520_SHP099_60min_R1 5 MGLSMER 7 0 A0A087X0X3;P52272-2;P52272;M0QZM1;M0R2I7 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGLS(1)MER;MGLS(1)MER;MGLS(1)MER;MGLS(1)MER;MGLS(1)MER 112.8 0.0028791999999999997 2229810000.0 2029930.0 2056150.0 1993480.0 1711030.0 2066310.0 1798220.0 1743630.0 1744940.0 2311790.0 1750400.0 True False 1917325.7363348694 1957369.4676559307 2121982.910480774 1873645.7767600701 2228916.841304337 1786996.6419641583 1919893.1365889197 1738887.2104120594 1892027.2114834227 1734892.8177905928 1.1051551523376568 1.1282365386402744 1.2231204652649061 1.0799778277635508 1.284757662518247 1.0300328779041925 1.1066350133571519 1.0023023858191733 1.0905729691664425 1.0 20.726415104739544 -6.321195629163361 24.999612611308013 1.0498478660998343 1.1608382779192874 0.46603979641413384 0.06321261861903746 233.6253894506556 97738.59168396691 0.020959547437575575 0.018484585764744325 4.773142177014443e-07 6.321195629163361 0.11099041181945313 MGPLGLDHMAS(ph)SIER ddPTM_KYSE-520_SHP099_60min_R1 1 MGPLGLDHMASSIER 15 0 A0A087X0X3;P52272-2;P52272;M0QZM1 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGPLGLDHMAS(0.588)S(0.412)IER 129.77 0.00060133 0.0 117920.0 131850.0 113570.0 116220.0 98958.0 99933.0 106700.0 132530.0 138120.0 119620.0 True False 111378.74253230786 125515.72808911512 120890.9039184247 127265.51385718289 106745.43160600038 99309.2810787357 117486.27729164883 132070.2843627346 113040.8897218563 118560.2598629517 0.9394272807857774 1.058666101391845 1.019657885856248 1.0734247209334218 0.9003474834602376 0.8376270530575006 0.9909414624044826 1.1139506991246446 0.9534467101584001 1.0 16.855260989326975 -10.446335595311862 8.686628656205302 1.0000001563983827 0.9899142234631196 0.0013957407014583145 0.07941284906476022 2.5763951478519055e-07 1.645934240264824e-08 0.08235898136534693 0.019974677317554538 3.578198297073283e-11 10.446335595311862 -0.010085932935263053 MGPLGLDHMASS(ph)IER ddPTM_KYSE-520_SHP099_60min_R1 3 MGPLGLDHMASSIER 15 0 A0A087X0X3;P52272-2;P52272;M0QZM1 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 MGPLGLDHMAS(0.056)S(0.944)IER;MGPLGLDHMAS(0.054)S(0.946)IER;MGPLGLDHMAS(0.016)S(0.984)IER 197.67 1.7742e-11 671644000.0 566210.0 508390.0 465920.0 528910.0 543970.0 541460.0 462814.0 509580.0 608350.0 514550.0 True False 534801.2025883478 483966.18129105197 495953.94869835774 579177.4473774106 586777.3442340798 538080.547295611 509599.75574936427 507812.3859168659 497888.97525551217 509991.487313842 1.0486473125368823 0.948969136406831 0.9724749550440128 1.1356610096140536 1.150563016894015 1.055077507528049 0.9992318860721754 0.9957271808428537 0.9762691880955219 1.0 18.960113640515843 -9.590814934870941 7.071561260567675 0.9999995523648773 1.032516713725085 0.02065356397962903 0.0644617756378147 0.0 0.0 0.07015423669189157 0.01701490164501477 2.565577068372425e-10 9.590814934870941 0.03251716136020777 MGPSGGEGMEPERRDS(ph)QDGSSYR ddPTM_KYSE-520_SHP099_60min_R1 13 MGPSGGEGMEPERRDSQDGSSYR 23 2 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 1 MGPSGGEGMEPERRDS(0.967)QDGS(0.025)S(0.007)Y(0.001)R;MGPSGGEGMEPERRDS(0.996)QDGS(0.002)S(0.002)YR;MGPSGGEGMEPERRDS(0.932)QDGS(0.032)S(0.032)Y(0.004)R;MGPSGGEGMEPERRDS(0.95)QDGS(0.011)S(0.039)YR;MGPSGGEGMEPERRDS(0.784)QDGS(0.107)S(0.107)Y(0.002)R;MGPSGGEGMEPERRDS(0.969)QDGS(0.011)S(0.021)YR;MGPSGGEGMEPERRDS(0.647)QDGS(0.297)S(0.056)YR;MGPSGGEGMEPERRDS(0.81)QDGS(0.143)S(0.043)Y(0.003)R;MGPSGGEGMEPERRDS(1)QDGSSYR;MGPSGGEGMEPERRDS(0.381)QDGS(0.309)S(0.309)YR;MGPSGGEGMEPERRDS(0.711)QDGS(0.038)S(0.251)YR;MGPSGGEGMEPERRDS(0.518)QDGS(0.127)S(0.355)YR;MGPSGGEGMEPERRDS(0.761)QDGS(0.118)S(0.118)Y(0.003)R 182.95 1.9962e-12 24033260000.0 7540980.0 7583353.0 7818380.0 6032178.0 5985136.0 6258606.0 5489100.0 5660532.0 8331050.0 5625794.0 True False 7122666.806829068 7219037.339035078 8322365.284650299 6605474.383479553 6456132.152434469 6219543.718441982 6043991.796453506 5640896.935670108 6818341.328679921 5575953.841961506 1.27738984373003 1.29467308081151 1.4925455842228892 1.1846357718692813 1.157852510156959 1.1154223823800655 1.0839386350313391 1.0116469927028227 1.222811651948928 1.0 22.41078718787469 -5.507407778303414 3.7436782073702184 1.1014580213021945 1.349918097769261 0.6592730246205027 0.0818533765569114 0.1375805072429919 4.197199884156933 0.024140355961908555 0.03461984746911597 3.1087959802071144e-06 5.507407778303414 0.24846007646706658 MGPSGGEGMEPERRDSQDGS(ph)SYR ddPTM_KYSE-520_SHP099_60min_R1 2 MGPSGGEGMEPERRDSQDGSSYR 23 2 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 1 MGPSGGEGMEPERRDS(0.104)QDGS(0.68)S(0.216)YR;MGPSGGEGMEPERRDS(0.232)QDGS(0.675)S(0.093)YR 205.59 4.427e-16 11712400000.0 1979710.0 2272900.0 1995690.0 1631630.0 1645860.0 1797990.0 1469390.0 1603770.0 2196430.0 1545070.0 True False 1869891.5398459553 2163706.472307547 2124335.3706168984 1786699.6246325527 1775379.8183375949 1786768.0774794735 1617930.2810644386 1598206.8961927316 1797613.679494475 1531381.8818462712 1.2210484935289745 1.4129111085596298 1.3872015829622772 1.1667237583341814 1.1593318684149208 1.1667684583843336 1.0565165359758746 1.0436370673694366 1.1738506905457367 1.0 20.546402662969236 -5.4462987671000604 2.669625237364823 1.103002290508599 1.3477579680548024 0.6868544042049488 0.0720791062270037 0.15885792935752285 2.218137103567709 0.02203066422716006 0.0342969140545781 3.5785017414821362e-06 5.4462987671000604 0.24475567754620342 MGPSGGEGMEPERRDSQDGSS(ph)YR ddPTM_KYSE-520_SHP099_60min_R1 1 MGPSGGEGMEPERRDSQDGSSYR 23 2 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 1 MGPSGGEGMEPERRDS(0.162)QDGS(0.134)S(0.688)Y(0.016)R 69.782 0.009291500000000001 888030000.0 147380.0 149300.0 231960.0 120500.0 108950.0 118040.0 108260.0 119500.0 242640.0 107360.0 True False 139204.5376052539 142127.4038961311 246912.51274912246 131952.28377035388 117523.74515929725 117303.26857528527 119203.97731578167 119085.48239150975 198582.692456641 106408.87392481614 1.3082042170995036 1.3356724740509152 2.3204127968084696 1.2400496208952045 1.1044543638562925 1.1023823883162849 1.1202447025236446 1.119131121297744 1.8662230426096873 1.0 16.69925894325981 -5.477411043025699 24.987641059727565 1.210161567388243 1.649083722094876 0.25028103274302727 0.3433445305597665 604.2927622704394 332100.04125406983 0.09689192849407655 0.14370721782874188 3.3311098677877814e-06 5.477411043025699 0.43892215470663287 MGQAPSQSLLPPAQDQPRS(ph)PVPSAFSDQSR ddPTM_KYSE-520_SHP099_60min_R1 8 MGQAPSQSLLPPAQDQPRSPVPSAFSDQSR 30 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MGQAPSQS(0.001)LLPPAQDQPRS(0.998)PVPS(0.001)AFSDQSR;MGQAPSQS(0.001)LLPPAQDQPRS(0.935)PVPS(0.058)AFS(0.006)DQSR;MGQAPSQSLLPPAQDQPRS(1)PVPSAFSDQSR;MGQAPSQSLLPPAQDQPRS(1)PVPSAFSDQSR;MGQAPSQSLLPPAQDQPRS(1)PVPSAFSDQSR;MGQAPSQSLLPPAQDQPRS(0.996)PVPS(0.004)AFS(0.001)DQSR;MGQAPSQSLLPPAQDQPRS(0.999)PVPS(0.001)AFSDQSR;MGQAPSQSLLPPAQDQPRS(0.997)PVPS(0.003)AFSDQSR 224.51 7.586100000000001e-23 17782780000.0 3507470.0 4626430.0 3842720.0 2437953.0 2672293.0 3474080.0 2486478.0 3269120.0 5294200.0 3759449.0 True False 3312903.647131905 4404169.3583869925 4090427.8797693932 2669655.3201227053 2882587.255832714 3452396.97807546 2737835.461926753 3257780.185738342 4332906.73592132 3726143.2066670605 0.8890972416745121 1.1819645982759768 1.0977645390683135 0.7164661077292956 0.7736115055038677 0.9265336264849414 0.7347638858936065 0.8743035372095488 1.1628395624109664 1.0 21.82925169169233 -1.7912788141480767 8.960682533271136 0.9271471056663729 1.1753076754218155 0.0 0.16251532832090518 0.0 0.0 0.039506764744662644 0.0 0.016170415744771575 1.7912788141480767 0.24816056975544254 MGS(ph)LDSK ddPTM_KYSE-520_SHP099_60min_R1 2 MGSLDSK 7 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 MGS(0.995)LDS(0.005)K;MGS(0.999)LDS(0.001)K 67.881 0.031122000000000004 488520000.0 1194620.0 1129520.0 971590.0 1136400.0 1169880.0 1206110.0 1151660.0 1140510.0 1410100.0 1060400.0 True False 1128352.04718407 1075256.163755916 1034220.2459989655 1244403.11432888 1261942.9002933349 1198582.2201062113 1268081.0319184654 1136553.837007036 1154061.3857282768 1051005.6809787157 1.0735927194354726 1.023073598188944 0.9840291681733639 1.1840117868535869 1.200700360742285 1.1404145969887334 1.2065406066479158 1.0813964734697308 1.098054374600139 1.0 20.003339036814246 -5.261003565742189 24.999986049199965 1.1401002770975732 1.0265160038772323 0.35814227141311683 0.062362082518080564 38.73542025070498 2221960.531733811 0.017154715927825685 0.02749417767749946 5.482724633525385e-06 5.261003565742189 -0.11358427322034093 MGS(ph)PAPLLPGDLLGGGS(ph)DSI ddPTM_KYSE-520_SHP099_60min_R1 2 MGSPAPLLPGDLLGGGSDSI 20 0 Q9UPQ9-1;Q9UPQ9;Q9UPQ9-2 Q9UPQ9-1 TNRC6B Trinucleotide repeat-containing gene 6B protein 2 MGS(1)PAPLLPGDLLGGGS(0.601)DS(0.399)I;MGS(1)PAPLLPGDLLGGGS(0.5)DS(0.5)I 93.37100000000001 0.0014761 22320000.0 48294.0 52394.0 40427.0 33236.0 37375.0 49152.0 35766.0 41925.0 43144.0 36946.0 True False 45615.0355482978 49876.913595002676 43032.98910548701 36394.73944723225 40316.19986533948 48845.224135991346 39381.57632252211 41779.57196036859 35310.13717173308 36618.687183553055 1.2456764307155548 1.3620617622087892 1.1751647154847997 0.9938843319205231 1.1009733817941765 1.333887910594723 1.0754502509912474 1.1409358219464922 0.9642655127077384 1.0 15.160292449556136 -1.0000000000071145 0.1576328400739675 0.9794133190553438 2.179178108083726 0.36988518509701696 0.10555572877209272 78.36001055871235 0.8015174018212681 0.3526292584160162 21.754921915873886 0.09999999999836182 1.0000000000071145 1.199764789028382 MGS(ph)PAPLLPGDLLGGGSDSI ddPTM_KYSE-520_SHP099_60min_R1 1 MGSPAPLLPGDLLGGGSDSI 20 0 Q9UPQ9-1;Q9UPQ9;Q9UPQ9-2 Q9UPQ9-1 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 MGS(1)PAPLLPGDLLGGGSDSI 78.285 0.0077773 41417000.0 76329.0 132870.0 111750.0 56413.0 87035.0 122390.0 76405.0 90123.0 126860.0 124120.0 True False 72094.87821191091 126486.72575806407 118953.58380632191 61774.474558813046 93884.15933859047 121626.11861173475 84128.76304094127 89810.38434786625 103825.42188035541 123020.39336389875 0.5860400559657752 1.0281768924597061 0.9669419886705526 0.5021482444466092 0.763159316690508 0.9886663120313745 0.683860299422758 0.7300446852108813 0.8439691911343193 1.0 16.908537968588345 -8.02411127334939 18.836195595451695 1.000000012212053 0.7891898804530377 0.13961657075137812 0.16353417662815165 161.20198151337033 125937.30859335305 0.15927679363958705 0.04112508379721166 9.45994750984896e-09 8.02411127334939 -0.2108101317590152 MGS(ph)SPLEVPKPR ddPTM_KYSE-520_SHP099_60min_R1 1 MGSSPLEVPKPR 12 1 Q8NCE2-2;Q8NCE2 Q8NCE2-2 MTMR14 Myotubularin-related protein 14 1 MGS(0.5)S(0.5)PLEVPKPR 98.105 0.0026639 393070000.0 304290.0 331130.0 262300.0 245550.0 300970.0 306900.0 264190.0 315350.0 330920.0 305440.0 True False 287410.4271129235 315222.01776373654 279208.2776948386 268886.99817270046 324654.626714949 304984.52326122514 290896.9034459297 314256.12445324357 270833.26981434046 302734.03922872443 0.949382592869831 1.0412506587195405 0.9222890111933814 0.8881954565061264 1.0724087305876526 1.0074338651782742 0.960899224240022 1.0380600914712925 0.8946244383497225 1.0 18.207691374463565 -5.753360871881641 24.999970819947634 0.9963336140451426 0.9547780875946933 0.13042537871359028 0.05679872383446247 438.35518549698975 1356538.9628017503 0.01704368446570251 0.021613886095255285 1.7645709618904745e-06 5.753360871881641 -0.041555526450449354 MGSIFDREDQAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 MGSIFDREDQASPR 14 1 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;H7BZZ8;A0A096LNK9;B5MCI0;P53814-2 A0A087WVP4 SMTN Smoothelin 1 MGSIFDREDQAS(1)PR;MGSIFDREDQAS(1)PR;MGSIFDREDQAS(1)PR 155.79 6.228100000000001e-07 1005300000.0 713440.0 775040.0 695280.0 593230.0 737220.0 608240.0 589590.0 615470.0 889060.0 604670.0 True False 673864.0609926191 737805.9150412434 740098.8612873338 649610.4008388963 795235.0197919896 604443.7485448283 649191.5110438907 613335.0782217779 727629.1153787544 599313.0942261417 1.1243940228983997 1.2310859251188722 1.2349118823158378 1.0839249252140912 1.3269108041412487 1.0085608914073727 1.0832259753679405 1.023396758940737 1.2141051520295911 1.0 19.192950369734685 -6.282472792509623 24.937194414617768 1.0684055676130713 1.1974225399213028 0.394267585197545 0.08321976300209605 840.2357480995737 996179.3803247976 0.0277780058887439 0.02451971769009932 5.218277944539919e-07 6.282472792509623 0.1290169723082315 MGSPAPLLPGDLLGGGS(ph)DSI ddPTM_KYSE-520_SHP099_60min_R1 1 MGSPAPLLPGDLLGGGSDSI 20 0 Q9UPQ9-1;Q9UPQ9;Q9UPQ9-2 Q9UPQ9-1 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 MGSPAPLLPGDLLGGGS(0.5)DS(0.5)I 75.045 0.010545 32011000.0 55939.0 74935.0 62603.0 37032.0 46744.0 62466.0 44565.0 60210.0 84821.0 69303.0 True False 52835.952158368156 71335.01012027184 66638.48954834157 40551.51014592319 50422.4868630215 62076.126523413834 49070.06511248666 60001.14556311968 69419.64456340561 68689.02933691804 0.7692051069641569 1.0385211555454557 0.9701474921341715 0.5903637092761786 0.734068996894692 0.9037269433366414 0.714379946640375 0.8735186119578936 1.01063656356103 1.0 16.06779207706319 -7.669141602177245 4.108054492013573 1.0065412340830655 0.8213725120161931 0.2649874114330628 0.12316852171359698 0.32525271564640784 9.740642739547091 0.10396079897830916 0.03409443313157608 2.142192023255046e-08 7.669141602177245 -0.1851687220668724 MGTLRDLQYALQEK ddPTM_KYSE-520_SHP099_60min_R1 2 MGTLRDLQYALQEK 14 1 A0A2R8YE50;A0A2R8YH74;B1ALS0;A0A2R8Y507;Q13976-2 A0A2R8YE50 PRKG1 0 ; 111.31 0.0011509 295550000.0 410760.0 486010.0 358700.0 295680.0 320300.0 451070.0 323550.0 401770.0 524550.0 437550.0 False True 387974.32397024025 462661.35008411686 381822.37594029197 323781.3383005668 345505.7877422936 448254.70481407904 356257.59154370154 400376.35364382336 429304.9428294215 433673.6474087494 0.8946227797986621 1.0668422046130135 0.8804371172233434 0.7466013677224752 0.7966953717541543 1.0336221891564157 0.8214877562249452 0.9232203894244411 0.9899262853405287 1.0 18.726250253566324 -7.69404245370608 3.7060668064681104 0.998066647651483 0.892854520306472 0.1616880131041022 0.09280574269681093 0.45514381523730524 11.762276688954573 0.08234929778688932 0.02562593163317082 2.022821431602109e-08 7.69404245370608 -0.10521212734501095 MGVMSS(ph)PTENSFTLDADF ddPTM_KYSE-520_SHP099_60min_R1 1 MGVMSSPTENSFTLDADF 18 0 P31350;P31350-2 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 MGVMS(0.09)S(0.78)PT(0.13)ENSFTLDADF 127.17 3.7204e-05 9212600.0 16958.0 24384.0 20270.0 13030.0 15046.0 24863.0 22905.0 28251.0 29312.0 27233.0 True False 16017.305935065098 23212.556038869803 21576.636633146714 14268.367282387644 16230.034599970504 24707.820794538442 25220.46093125786 28153.00387483297 23989.679695388455 26991.736806953388 0.5934151644120527 0.8599874919086339 0.7993793355153167 0.5286198285214438 0.6012964158641861 0.9153846220141498 0.9343771062839045 1.0430230583598616 0.8887786609273854 1.0 14.720230190817412 -6.377906861029076 4.926394561278719 0.964057166082247 0.6861162621923622 0.6665097762493262 0.09919002526489122 0.1578847915563031 5.756982809432743 0.03842928507936766 0.03363522491065185 4.188833893874653e-07 6.377906861029076 -0.2779409038898848 MHDGELEEQEEDDEKS(ph)DS(ph)EGGDLDK ddPTM_KYSE-520_SHP099_60min_R1 2 MHDGELEEQEEDDEKSDSEGGDLDK 25 1 Q9NU22 Q9NU22 MDN1 Midasin 2 MHDGELEEQEEDDEKS(1)DS(1)EGGDLDK;MHDGELEEQEEDDEKS(1)DS(1)EGGDLDK 167.61 1.931e-10 3012900000.0 3121300.0 3840600.0 2760900.0 2690200.0 3157500.0 3642000.0 3224400.0 3456600.0 3315300.0 3115000.0 True False 2948155.2668427103 3656091.8111418737 2938872.0315961917 2945875.799161877 3405977.286282527 3619268.9270686973 3550353.81911146 3444609.8613765016 2713325.0919118905 3087403.5234333314 0.9548979407668192 1.184196294197441 0.9518911309422987 0.9541596285690349 1.1031850098088012 1.172269481329058 1.1499481011031907 1.1156979757365635 0.8788372078083758 1.0 21.557962624745716 -3.9778538239740033 18.017610882443428 1.0622589832987284 0.685837128278186 0.08251513338818206 0.10028824780684145 27411798.457485773 527391322.2976718 0.025671366858244712 298753115.18780774 0.0001052316005625403 3.9778538239740033 -0.3764218550205424 MHEFHS(ph)QENLVVHIPK ddPTM_KYSE-520_SHP099_60min_R1 7 MHEFHSQENLVVHIPK 16 0 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 MHEFHS(1)QENLVVHIPK;MHEFHS(1)QENLVVHIPK;MHEFHS(1)QENLVVHIPK;MHEFHS(1)QENLVVHIPK;MHEFHS(1)QENLVVHIPK;MHEFHS(1)QENLVVHIPK;MHEFHS(1)QENLVVHIPK 165.19 8.6454e-08 14319270000.0 8741860.0 10372980.0 10413710.0 11507210.0 9112540.0 9820770.0 9772270.0 10969540.0 10896160.0 8907470.0 True False 8256931.5993341245 9874646.4706396 11084994.409125132 12600851.778631147 9829645.054739816 9759474.931600325 10760146.419764383 10931489.226049872 8917692.013840871 8828556.745706787 0.9352527074540653 1.1184893244800755 1.2555839791725438 1.4272833195254455 1.113392068247151 1.1054439828283633 1.2187888382772079 1.2381966317842057 1.0100962445733193 1.0 23.073746180924434 -7.774079156509303 24.488168254144306 1.0050478329710413 1.1825424643337983 0.2430517784849665 0.12069643430474575 297.57518099487254 576495.6274465852 0.11966988518123628 0.03179003391979839 1.6823673971064403e-08 7.774079156509303 0.177494631362757 MHLPS(ph)PTDS(ph)NFYR ddPTM_KYSE-520_SHP099_60min_R1 5 MHLPSPTDSNFYR 13 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 2 MHLPS(0.999)PT(0.221)DS(0.559)NFY(0.221)R;MHLPS(1)PT(0.001)DS(0.999)NFYR;MHLPS(1)PTDS(1)NFYR;MHLPS(1)PT(0.001)DS(0.999)NFYR;MHLPS(1)PT(0.002)DS(0.998)NFYR 173.28 3.3436e-07 2353569000.0 298215.0 396846.0 378858.0 691750.0 553952.0 583260.0 583030.0 898980.0 810750.0 718910.0 True False 281672.4194731362 377780.92248201027 403279.7928742323 757493.7120177789 597544.8708442681 579619.6579906878 641968.3622244616 895861.6482035095 663538.237344303 712541.016703517 0.3953069547859278 0.530188317059651 0.565974145235816 1.0630878703968931 0.8386111912669052 0.813454445994178 0.900956362055407 1.257277303625415 0.9312281283315883 1.0 19.44261353827392 -4.452551962462545 0.541111687486865 1.0310070995778262 7.475356842365365e-12 0.7165211018171926 0.133635970338351 1.8797442616181084 0.48736938275195635 0.08242102762775448 1.1950378879506534 3.527345801098662e-05 4.452551962462545 -1.0310070995703509 down MHLPS(ph)PTDSNFYR ddPTM_KYSE-520_SHP099_60min_R1 28 MHLPSPTDSNFYR 13 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 MHLPS(0.999)PT(0.001)DSNFYR;MHLPS(0.497)PT(0.497)DS(0.006)NFYR;MHLPS(1)PTDSNFYR;MHLPS(0.932)PT(0.067)DS(0.001)NFYR;MHLPS(0.987)PT(0.013)DSNFYR;MHLPS(0.944)PT(0.055)DS(0.001)NFYR;MHLPS(0.5)PT(0.5)DSNFYR;MHLPS(0.976)PT(0.024)DSNFYR;MHLPS(0.989)PT(0.011)DSNFYR;MHLPS(1)PTDSNFYR;MHLPS(0.986)PT(0.014)DSNFYR;MHLPS(0.98)PT(0.02)DSNFYR;MHLPS(0.989)PT(0.011)DSNFYR;MHLPS(1)PTDSNFYR;MHLPS(0.937)PT(0.063)DSNFYR;MHLPS(0.884)PT(0.107)DS(0.009)NFYR;MHLPS(1)PTDSNFYR;MHLPS(0.999)PT(0.001)DSNFYR;MHLPS(0.998)PT(0.002)DSNFYR;MHLPS(0.998)PT(0.002)DSNFYR;MHLPS(0.998)PT(0.002)DSNFYR;MHLPS(0.983)PT(0.017)DSNFYR;MHLPS(0.985)PT(0.015)DSNFYR;MHLPS(0.999)PT(0.001)DSNFYR;MHLPS(0.708)PT(0.289)DS(0.003)NFYR;MHLPS(0.998)PT(0.002)DSNFYR;MHLPS(0.958)PT(0.016)DS(0.026)NFYR;MHLPS(1)PTDSNFYR 214.89 2.0043999999999998e-11 210814810000.0 9604408.0 13457800.0 11327380.0 16892190.0 15322620.0 15943420.0 15773890.0 20201790.0 24192740.0 15500230.0 True False 9071632.342327317 12811267.087430382 12057561.039248804 18497618.6587779 16528423.020218018 15843911.20186862 17368468.73953108 20131714.705623224 19799948.265345648 15362910.021196444 0.5904891931158255 0.833908879877216 0.7848487703574909 1.2040439365495503 1.0758653795025486 1.0313092493550071 1.1305454966258044 1.3104102463561387 1.2888149600581762 1.0 23.872948179457346 -4.4770078170215974 0.6422374163204932 1.1891750704521664 0.325338898343993 0.7307398834341104 0.1137444033076198 1.375969193095888 0.5194429977564977 0.0567823844090075 0.8407103518111336 3.334204113560753e-05 4.4770078170215974 -0.8638361721081734 MHNLHGT(ph)KPPPSEGSDEEEEEEDEEDEEER ddPTM_KYSE-520_SHP099_60min_R1 1 MHNLHGTKPPPSEGSDEEEEEEDEEDEEER 30 1 Q9BQ67;M0QX71 Q9BQ67 GRWD1 Glutamate-rich WD repeat-containing protein 1 1 MHNLHGT(0.333)KPPPS(0.333)EGS(0.333)DEEEEEEDEEDEEER 117.81 0.0006190000000000001 66806000.0 68767.0 5949.2 16064.0 14198.0 27295.0 10256.0 21260.0 9882.6 37914.0 13702.0 True False 64952.357426384195 5663.391502068743 17099.511143308766 15547.37365121564 29442.96121269406 10191.988499729969 23409.168277604997 9848.319567216186 31029.773334162055 13580.61093999469 4.782727206704707 0.41702037758773736 1.2591120693216362 1.144821372168822 2.168014483500517 0.7504808542681036 1.7237198224024926 0.725175002121078 2.2848584258297135 1.0 13.72926076195057 -4.252555053898543 24.86109108565901 1.2872165847739439 4.782729147170706 0.7636962827704918 0.5853552311720659 482.8039616529104 1351004.2195614306 0.135492115258646 1.5879155757569308 5.590426553173654e-05 4.252555053898543 3.495512562396762 MHNLHGTKPPPS(ph)EGS(ph)DEEEEEEDEEDEEER ddPTM_KYSE-520_SHP099_60min_R1 1 MHNLHGTKPPPSEGSDEEEEEEDEEDEEER 30 1 Q9BQ67;M0QX71 Q9BQ67 GRWD1 Glutamate-rich WD repeat-containing protein 1 2 MHNLHGT(0.03)KPPPS(0.989)EGS(0.981)DEEEEEEDEEDEEER 175.67 9.9023e-11 77176000.0 96326.0 16101.0 17941.0 27370.0 38887.0 12731.0 27050.0 11713.0 63470.0 17325.0 True False 90982.60475887966 15327.483791906281 19097.505566614953 29971.236570909434 41947.185663236305 12651.541106675337 29784.477982559492 11672.370336834749 51945.44794849569 17171.513978646028 5.298461444461034 0.89261108897952 1.1121620138075203 1.745404430161531 2.4428356005999556 0.7367749356526401 1.7345283601433492 0.6797519631262656 3.0250942353186487 1.0 14.067729624084201 -4.255956608194622 24.87028023674436 1.4862170111950515 5.298463187970437 0.709682699511715 0.7316311456989114 287.92808858200897 1306021.9253920617 0.17245126833284213 1.4540878153706165 5.546811302250066e-05 4.255956608194622 3.812246176775386 MHPHLSTLS(ph)LPRR ddPTM_KYSE-520_SHP099_60min_R1 2 MHPHLSTLSLPRR 13 1 O95140-2 O95140-2 1 MHPHLS(0.001)T(0.001)LS(0.997)LPRR;MHPHLSTLS(1)LPRR 60.208999999999996 0.024191 927080000.0 292650.0 310360.0 296670.0 237700.0 261990.0 500790.0 515360.0 658980.0 951180.0 675920.0 True False 276416.12111668853 295449.8397401422 315793.8228887829 260290.9365328889 282607.12248081056 497664.3838513818 567457.6182289048 656694.1521870879 778469.6892965205 669931.8746578025 0.41260332814867234 0.441014752270231 0.4713819939528756 0.3885334410545014 0.4218445683378847 0.7428581960002814 0.8470377954754862 0.9802401960983326 1.1620132117077704 1.0 19.35365486987225 -6.677673440487985 1.3024058837676737 1.0628972707521314 0.41847641701338933 0.954942932603735 0.059283228276569476 0.08517840744563933 0.2935506607723252 0.03635867709722525 0.02271647957908527 2.1005187352436037e-07 6.677673440487985 -0.644420853738742 down MHRDS(ph)CPLDCK ddPTM_KYSE-520_SHP099_60min_R1 2 MHRDSCPLDCK 11 1 P84103;P84103-2;A0A087X2D0 P84103 SRSF3 Serine/arginine-rich splicing factor 3 1 MHRDS(1)CPLDCK;MHRDS(1)CPLDCK 109.79 0.00020312 545270000.0 897410.0 822990.0 825090.0 806460.0 854660.0 904400.0 804580.0 902680.0 1106660.0 829350.0 True False 847628.878357516 783452.3250668243 878276.6215906771 883105.7159289606 921916.8796497931 898755.3041298536 885914.7983440929 899548.8137670963 905718.4406283633 822002.604224537 1.0311754172082634 0.9531019987533004 1.0684596582503871 1.0743344502686427 1.1215498283238574 1.0933728184203548 1.0777518146427887 1.0943381555533087 1.1018437605593747 1.0 19.648783439020015 -4.886390085512163 5.926319796601587 1.0853842415214143 0.9929584820505767 0.49315096772441025 0.03506369043881239 0.1403532969625931 6.690305061978838 0.00859661103655617 0.018376576355380467 1.299002283420006e-05 4.886390085512163 -0.09242575947083764 MHS(ph)PPTIVR ddPTM_KYSE-520_SHP099_60min_R1 2 MHSPPTIVR 9 0 O15021;O15021-2;O15021-3;O15021-6;H7C1I9 O15021 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 MHS(1)PPTIVR;MHS(0.999)PPT(0.001)IVR 103.43 0.0012946 888480000.0 760970.0 695130.0 488750.0 444350.0 687140.0 657000.0 506830.0 617960.0 609910.0 584500.0 True False 718757.4771439133 661734.9113885979 520255.6070276495 486580.8904013006 741214.0087082103 652899.4192982243 558065.3225841267 615816.4409929478 499165.7185799117 579321.7847341193 1.2406878113064368 1.142257945111286 0.8980425399787472 0.8399147127267409 1.2794512967407081 1.1270065039896153 0.9633080220524621 1.0629954840651776 0.8616380942915941 1.0 19.144005391366008 -4.555088708374967 6.799835134629043 1.0131704213675152 1.2176617064955868 0.2773616067725674 0.12482755450219675 0.2136479762363454 31.313448285383014 0.03351146957593593 0.09310317511167392 2.785552137587794e-05 4.555088708374967 0.20449128512807158 MHS(ph)QPR ddPTM_KYSE-520_SHP099_60min_R1 1 MHSQPR 6 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 MHS(1)QPR 90.37 0.015344 283490000.0 178300.0 174840.0 151480.0 167570.0 213790.0 259420.0 288330.0 152370.0 199190.0 336410.0 True False 168409.34356776217 166440.42395980973 161244.64317656943 183495.80241824247 230614.05670129566 257800.86355303688 317477.2102296256 151841.46403342547 163022.1171712753 333429.6691230193 0.5050820582664686 0.49917700604621756 0.4835941672517391 0.550328358303776 0.6916422803881027 0.7731791361911495 0.9521564504581982 0.45539278023097385 0.48892504857187163 1.0 18.347022957862006 -5.705951919579014 3.154748281135889 0.7156283251934181 0.49845600840880094 0.3073530974248645 0.16114091313408552 0.35700517952944755 7.219920594302217 0.05297765235869948 0.06817301503579783 1.9681041650031624e-06 5.705951919579014 -0.21717231678461718 MHVEHER ddPTM_KYSE-520_SHP099_60min_R1 2 MHVEHER 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0 Q15424-2 SAFB Scaffold attachment factor B1 0 ; 70.69 0.046465 382410000.0 341010.0 298584.0 242239.0 197536.0 263787.0 324390.0 185774.0 293525.0 290750.0 200396.0 False True 322093.49551341846 284239.5764562785 257854.1135361039 216309.76204863584 284545.53615727904 322365.3616836388 204553.84889951983 292506.8302842502 237957.12921104647 198620.6473457286 1.6216516249328659 1.4310676168601824 1.2982241120545273 1.0890597978573533 1.4326080392940492 1.6230203958731153 1.0298720280750249 1.4726909522910718 1.1980483015788732 1.0 17.5996560785466 -13.583026491514628 0.10159340157911965 3.662206729372357e-14 1.5868069246650516 0.30605211650925745 0.18372136760386681 234.10167238857665 1.7591984180299955 51.20002271791082 3.1256303137957233 2.6120020201154646e-14 13.583026491514628 1.586806924665015 MIDALFS(ph)FDSR ddPTM_KYSE-520_SHP099_60min_R1 1 MIDALFSFDSR 11 0 Q9NR99 Q9NR99 MXRA5 Matrix-remodeling-associated protein 5 1 MIDALFS(1)FDSR 67.494 0.032418 5126100.0 17106.0 15791.0 13011.0 15311.0 14917.0 13053.0 12261.0 13143.0 18741.0 13193.0 True False 16157.096080034407 15032.37665722577 13849.70987833605 16766.152836579997 16090.883033880104 12971.53138523549 13500.461535828543 13097.410000599266 15338.106822164142 13076.12028399869 1.2356184960921415 1.1496052598736768 1.0591604831965338 1.2821962839464558 1.230554834645456 0.9920015343625137 1.032451617346249 1.0016281371032223 1.1729860607762574 1.0 13.67464693282342 -6.260567441722746 24.999929159336496 1.0394551108864336 1.1867982297674569 0.5141924223546153 0.07361559477361246 72.14115276181917 2068418.8421422332 0.025720801475744844 0.024311711701126143 5.48823322047929e-07 6.260567441722746 0.14734311888102325 MIDQVFGVLES(ph)PELSR ddPTM_KYSE-520_SHP099_60min_R1 4 MIDQVFGVLESPELSR 16 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 MIDQVFGVLES(1)PELSR;MIDQVFGVLES(0.999)PELS(0.001)R;MIDQVFGVLES(0.919)PELS(0.081)R;MIDQVFGVLES(0.999)PELS(0.001)R 161.51 1.1312999999999999e-06 1720403000.0 773338.0 767308.0 620015.0 467600.0 559445.0 734306.0 547994.0 623056.0 794421.0 734718.0 True False 730439.3995289168 730445.371927212 659982.1589590745 512040.56341093424 603470.1386933739 729722.9238770199 603390.5814260528 620894.7641583632 650174.1721237106 728208.9701219541 1.0030628974627835 1.0030710989523837 0.9063087465793596 0.7031505850926035 0.8287046211368557 1.0020790100330847 0.828595370536293 0.8526326777523506 0.8928401033220246 1.0 19.4739929865331 -4.847720984651124 4.424311569513424 0.864160868179252 1.0035782976243564 0.27595028786264864 0.08201035525682693 0.2463941756750883 8.659136329399507 0.022126124885110808 0.05037510193734502 1.419969497456661e-05 4.847720984651124 0.13941742944510438 MIFEGPNKLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 MIFEGPNKLSPR 12 1 E9PQ01;E9PKN0;O94913 E9PQ01 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 MIFEGPNKLS(1)PR 105.53 0.00047031 1186800000.0 1318700.0 1145600.0 1187400.0 1102700.0 1253100.0 1193500.0 1087100.0 1220000.0 1442400.0 1185100.0 True False 1245549.0822367235 1090563.6564193433 1263941.7039071731 1207500.2764611575 1351711.840836306 1186050.923793654 1196994.6770735842 1215768.1047501403 1180496.519945016 1174600.9359938472 1.060401915296318 0.9284546121160727 1.076060528453209 1.0280089513460788 1.1507838955471312 1.0097479811644443 1.0190649780649028 1.0350477915475702 1.0050192229296842 1.0 20.163739261900233 -9.974053999878567 13.672432792252641 1.0000004731293408 1.0348511274930932 0.03616937146567922 0.053784616507463315 0.0 0.0 0.05186209186659313 0.01257840486655589 1.0615635549066738e-10 9.974053999878567 0.03485065436375234 MIIEEAKR ddPTM_KYSE-520_SHP099_60min_R1 1 MIIEEAKR 8 1 B7ZAR1;E9PCA1;P48643;E7ENZ3;P48643-2 B7ZAR1 CCT5 T-complex protein 1 subunit epsilon 0 85.676 0.012612 244610000.0 196810.0 172670.0 121460.0 93346.0 150280.0 167260.0 106800.0 113900.0 120270.0 136440.0 False True 185892.55696899173 164374.6740170459 129289.5059428712 102217.57577450163 162106.18102376512 166216.06829805308 117596.38626755468 113504.90748445984 98431.99975997451 135231.24774871374 1.3746272408461147 1.215508077855544 0.9560623605508435 0.7558724590372929 1.1987331605857123 1.2291247109315684 0.869594773584223 0.8393393492558339 0.7278791063355455 1.0 17.04506902667303 -4.62334466277058 3.0988830482999803 0.9499201473443323 1.3527995621220494 0.4512277754765386 0.15791167768156925 0.25047575463793337 4.581622131870711 0.04577088571924355 0.16260912070040584 2.3804295740651404e-05 4.62334466277058 0.40287941477771716 MIKPFFHSLSEK ddPTM_KYSE-520_SHP099_60min_R1 8 MIKPFFHSLSEK 12 1 P10599 P10599 TXN Thioredoxin 0 ;;;;;;; 189.3 9.7138e-08 20071760000.0 21104170.0 19291410.0 15595360.0 16282520.0 24271780.0 19948390.0 16904000.0 16358950.0 16450770.0 14097280.0 False True 19933479.61998012 18364621.706603225 16600661.859058274 17830005.80528187 26181830.998462863 19823884.69853046 18612821.28714181 16302204.620657647 13463724.858164096 13972389.066717865 1.426633593210021 1.3143508686247243 1.1881047528658457 1.276088557235557 1.873826363798286 1.4187899151585193 1.3321144435834116 1.1667442513098485 0.963595044045445 1.0 23.73607538503215 -7.40829202842961 2.0416171541073065 0.9810267369240618 1.412612436798659 0.5024332297019776 0.1719923761231588 0.3205206248218395 2.443979824274409 0.1502205832204154 0.05378687006332689 3.905781747759535e-08 7.40829202842961 0.43158569987459716 MILELFSK ddPTM_KYSE-520_SHP099_60min_R1 1 MILELFSK 8 0 Q5TA02;P78417-3;P78417;Q5TA01;P78417-2 Q5TA02 GSTO1 Glutathione S-transferase omega-1 0 100.15 0.020331000000000002 16384000.0 201330.0 230870.0 196830.0 161890.0 219810.0 191450.0 191190.0 190500.0 235790.0 184720.0 False True 190161.82355859497 219778.65865706513 209517.97673913505 177275.9769259968 237107.79645218144 190255.08953522847 210517.35103458603 189839.19996303442 192976.47978219326 183083.52450998535 1.0386615839276327 1.2004283795895487 1.1443846588593938 0.968279245226832 1.2950799209638857 1.039171001565747 1.1498432291929384 1.0368994177446078 1.0540352022318007 1.0 17.48214244483374 -7.530241037664118 1.3885527704138836 1.0095017975156648 1.123042158259499 0.16954297515371175 0.08786675018448582 0.7310448365615002 2.5190773327709564 0.07591048231436068 0.025258671086025867 2.9495717312786557e-08 7.530241037664118 0.11354036074383411 MIPLEKPGSGGSS(ph)PGATSGSGR ddPTM_KYSE-520_SHP099_60min_R1 1 MIPLEKPGSGGSSPGATSGSGR 22 1 Q9UEE5 Q9UEE5 STK17A Serine/threonine-protein kinase 17A 1 MIPLEKPGS(0.021)GGS(0.412)S(0.566)PGATSGS(0.001)GR 92.463 0.0016009 527190000.0 633010.0 609120.0 522680.0 492690.0 586580.0 684630.0 463160.0 604150.0 689600.0 571770.0 True False 597895.6734258505 579856.9608922404 556372.7891175688 539515.1094673502 632740.5088163438 680356.9702193954 509980.73280599795 602054.3446596697 564386.0234013333 566704.5626303287 1.0550394559217062 1.0232085625018892 0.981768677730764 0.9520218206171128 1.1165262299627743 1.2005496604113353 0.8999058176608811 1.0623777967575678 0.9959087337884945 1.0 19.112237292302726 -3.142325299376307 2.9972951400590313 1.0287136235116205 11.082672922390017 0.010375831854176343 0.08061726871632319 8375.248248802469 207.27056818407146 0.021416987022934413 575523.5865765671 0.0007205675506486252 3.142325299376307 10.053959298878397 MIS(ph)TPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 MISTPSPK 8 0 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 2 MIS(0.502)T(0.502)PS(0.997)PK 70.41199999999999 0.018624 0.0 1844400.0 1727500.0 1377300.0 1485900.0 1709300.0 1798300.0 1555100.0 1708900.0 1843900.0 1703400.0 True False 1742087.4552797528 1644508.3069696373 1466082.9617579172 1627119.4892478734 1843812.185413372 1787076.142654483 1712304.684313431 1702972.2247602593 1509094.2409363664 1688309.2012251483 1.0318533204791986 0.9740563551843903 0.8683734950292463 0.9637568095151815 1.092105749394353 1.0585005053325913 1.014212730150893 1.008685034426437 0.893849444071778 1.0 20.687147716392538 -4.24787027753144 21.77306848649496 0.9883204609593622 1.031853500291106 0.0430445041872517 0.06406016581555111 1613.2018598722227 2588267.4236144936 0.017472613889682333 0.2810104226335884 5.65105745008807e-05 4.24787027753144 0.043533039331743795 MIST(ph)PS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 MISTPSPK 8 0 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 2 MIS(0.005)T(0.995)PS(1)PK 85.62200000000001 0.011984999999999999 450670000.0 1661100.0 1563800.0 1479300.0 1309400.0 1521700.0 1485800.0 1385000.0 1547000.0 1655300.0 1390600.0 True False 1568955.471679245 1488672.700688347 1574658.0449636872 1433844.9823145343 1641449.1327113598 1476526.5710704753 1525009.3162974108 1541633.818072516 1354739.2467172656 1378280.365870428 1.1383427570546574 1.0800942519036776 1.142480212267437 1.0403144511233136 1.1909399374449714 1.0712817273124264 1.1064579849356837 1.1185197556659128 0.9829199343354967 1.0 20.394437956139075 -7.761464125274064 24.999999999858503 0.9914599120121715 1.1098954005826898 0.5900497481308262 0.03986469091454577 0.41484137079060823 414659.03764856566 0.02880033569663128 0.009248411405266464 1.7319520920669116e-08 7.761464125274064 0.11843548857051822 MIST(ph)PS(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 1 MISTPSPKK 9 1 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 2 MIS(0.43)T(0.57)PS(1)PKK 89.40299999999999 0.004836 1278500000.0 2285800.0 2264100.0 2124100.0 2036100.0 2188900.0 2071700.0 1877300.0 1907000.0 2824300.0 2207000.0 True False 2159002.1173706716 2155329.237516617 2261022.8846801613 2229610.3318242147 2361153.97686265 2058769.7518419041 2067075.8046824005 1900385.0620971448 2311478.3148091445 2187447.6970200175 0.9869959955211283 0.9853169245842285 1.0336351757166016 1.0192748081984477 1.0794104837703202 0.9411743899735693 0.9449715334901032 0.8687682291494598 1.0567010667080612 1.0 21.060817091113964 -6.293198613556115 24.897241245380375 0.9530365792410719 1.0195626288238557 0.2366663456174204 0.05125626070561766 833.7589026510014 653611.9887372814 0.017712901297405513 0.015622126949163595 5.090979947674951e-07 6.293198613556115 0.06652604958278385 MISTPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 MISTPSPK 8 0 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 MIS(0.001)T(0.007)PS(0.993)PK;MIS(0.003)T(0.001)PS(0.996)PK;MISTPS(1)PK;MISTPS(1)PK;MISTPS(1)PK;MISTPS(1)PK;MIS(0.002)T(0.002)PS(0.997)PK;MIS(0.064)T(0.029)PS(0.907)PK;MIS(0.044)T(0.027)PS(0.929)PK 155.5 0.00030571 35512430000.0 38008470.0 35220800.0 30834520.0 28223490.0 30686410.0 33284980.0 30651710.0 34497410.0 37548690.0 33200120.0 True False 35900064.40109351 33528739.90050135 32822162.49617639 30905842.003898293 33101255.885210782 33077236.09338359 33750283.978661686 34377746.53646605 30730794.42144638 32905992.76610254 1.0909886432016498 1.0189250371148297 0.9974524315214551 0.9392162158296994 1.0059339683350745 1.0052040164385332 1.0256576733168457 1.0447260102688531 0.933896589593343 1.0 24.971847012506966 -4.284633594044319 2.5139067320961273 0.9958216059359959 1.1088140032105829 0.44663698382197115 0.03246311381228248 0.4656489471420118 3.871473395279795 0.008647487611861411 0.11002850276250895 5.192379253005416e-05 4.284633594044319 0.11299239727458699 MISTPS(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 2 MISTPSPKK 9 1 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 MIS(0.104)T(0.104)PS(0.793)PKK;MIS(0.145)T(0.145)PS(0.709)PKK 113.63 0.00057514 2768300000.0 4277100.0 4604500.0 4425500.0 3118300.0 3435000.0 3847800.0 3091700.0 3006700.0 5203500.0 3572000.0 True False 4039840.736812536 4383292.9085046 4710774.811050361 3414662.2944489177 3705314.9575235103 3823784.4529310614 3404239.208084264 2996270.4594690567 4258675.569560378 3540354.858973948 1.141083563014174 1.238094225892076 1.330593965491815 0.9644971847366007 1.0465942271666435 1.0800568319412072 0.9615531051796506 0.846319247313368 1.2028951162241999 1.0 21.755462541955573 -5.268983514973386 24.92883936407046 1.0100112679727764 1.2367409508860214 0.5271694432542404 0.09629354853373567 410.8540647697475 1357626.2103696282 0.026778245140043126 0.04059246221370811 5.382902146434992e-06 5.268983514973386 0.22672968291324502 MITVT(ph)RY(ph)LPK ddPTM_KYSE-520_SHP099_60min_R1 2 MITVTRYLPK 10 1 H7C1T0;H0Y770;A0A2R8Y5T1;A0A2R8Y842;A0A2R8YEW8;A0A5F9UWT1;A0A2R8Y5K9;A0A2R8Y721;A0A2R8Y6V4;A0A2R8Y6H3;A0A2R8Y7U0;O75140-9;O75140-4;O75140-8;O75140-1;O75140-5;O75140-6;O75140 H7C1T0 DEPDC5 DEP domain-containing protein 5 2 MITVT(1)RY(1)LPK;MITVT(1)RY(1)LPK 94.465 0.0046138 26136700.0 103193.0 135090.0 121978.0 153399.0 129435.0 146946.0 110048.0 143400.0 213255.0 134187.0 True False 97468.67857985447 128600.07362577603 129840.89705170038 167977.99483890893 139620.7981155912 146028.85550714898 121172.72580497984 142902.57886981158 174533.26772107196 132998.2075759062 0.7328570839890911 0.9669308780148783 0.976260503192091 1.2630094638158087 1.0497945849075092 1.0979761168871827 0.9110854049354221 1.0744699607192272 1.3122978941010193 1.0 17.02104727701458 -4.293232192337752 1.4821212869833622 1.0917642272993702 0.6114882592929269 0.4810260991869926 0.11400946595364794 0.9703384885115658 2.0651145733328145 0.033015616071974015 0.6752376283153158 5.090586338493714e-05 4.293232192337752 -0.48027596800644323 MIYAS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 2 MIYASSK 7 0 P60981;F6RFD5;P60981-2;E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;Q9Y281-3;Q9Y281 P60981;E9PP50;Q9Y281-3 DSTN;CFL1;CFL2 Destrin;Cofilin-1;Cofilin-2 1 MIYAS(0.987)S(0.013)K;MIYAS(0.995)S(0.005)K 99.802 0.0052555 869020000.0 1503290.0 1488740.0 1250430.0 1484970.0 1593970.0 1439660.0 1383220.0 1441870.0 1736240.0 1551380.0 True False 1419899.5069656821 1417218.695755703 1331034.7185587375 1626101.1023274905 1719406.3705513072 1430674.5479252383 1523049.3765262826 1436868.489504988 1420982.5830486224 1537635.9801553749 0.9234302040865383 0.921686741235397 0.865637079085675 1.057533202470442 1.1182141890160275 0.9304377410449719 0.9905136171256748 0.9344659646685658 0.9241345815184652 1.0 20.55228256951336 -5.251509954853132 24.997375653254224 0.9933137258424275 0.9053948816863495 0.3324926903897609 0.05843834537086416 927.722114689598 2335541.3494958607 0.01743765087691602 0.0297531776181918 5.603895720252378e-06 5.251509954853132 -0.08791884415607798 MIYASSK ddPTM_KYSE-520_SHP099_60min_R1 2 MIYASSK 7 0 P60981;F6RFD5;P60981-2;E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;Q9Y281-3;Q9Y281 P60981;E9PP50;Q9Y281-3 DSTN;CFL1;CFL2 Destrin;Cofilin-1;Cofilin-2 0 ; 178.84 0.0022132 1899200000.0 6381300.0 7659400.0 5107100.0 4647300.0 6588800.0 7451500.0 5327500.0 6253600.0 5665500.0 5492200.0 False True 6027316.568193822 7291430.927006203 5436311.837648914 5088977.994738304 7107301.074856148 7404992.424506412 5866055.691389489 6231907.72120122 4636788.015632618 5443543.380866939 1.1072413952608036 1.3394640984462898 0.9986715375056177 0.9348649654607571 1.305638731535972 1.3603257853209378 1.0776171476850176 1.1448255823780586 0.8517959151258133 1.0 22.376114624081687 -7.725346843277358 10.067010465793622 0.926123243791711 1.1609179573552457 0.3118503643248458 0.1382272226249077 0.4501583868822365 122.93464132820816 0.09965280624632744 0.03709372947832195 1.8821453397684668e-08 7.725346843277358 0.23479471356353476 MKDTDSEEEIR ddPTM_KYSE-520_SHP099_60min_R1 7 MKDTDSEEEIR 11 1 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2;A0A590UJC0;G3V226 P0DP25 CALM2;CALM1 0 ;;;;;; 151.1 5.7714e-05 8317060000.0 16108040.0 15708520.0 10299250.0 9159570.0 15959040.0 15611140.0 10705240.0 13185630.0 13353310.0 12700330.0 False True 15214494.910618363 14953859.12023077 10963156.134382645 10030092.77887487 17214925.653483555 15513705.084601637 11787430.132274134 13139892.12707918 10928685.51355172 12587814.956907216 1.2086684593555952 1.187963055655283 0.8709340081589708 0.7968096777090875 1.3675864883950601 1.232438285573059 0.9364159047957809 1.04385806210704 0.8681955963735314 1.0 23.585524540245665 -6.795988111296665 24.933515666234687 0.9657721338597652 1.1007498379400968 0.16209473948010444 0.16451235648282053 421.1396537896094 303929.04934104066 0.07532619670403602 0.05078756611268056 1.5996018167168734e-07 6.795988111296665 0.1349777040803316 MKDTDSEEEIREAFR ddPTM_KYSE-520_SHP099_60min_R1 2 MKDTDSEEEIREAFR 15 2 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2;A0A590UJC0;G3V226 P0DP25 CALM2;CALM1 0 ; 162.41 3.3636e-08 1273820000.0 1529960.0 2314680.0 1519220.0 1282300.0 1604380.0 1150270.0 671960.0 935660.0 1798800.0 1062660.0 False True 1445090.0689003542 2203479.298394486 1617151.3520379441 1404169.4064624473 1730635.5783265107 1143090.7382590072 739888.2744976224 932414.4138446864 1472183.264057885 1053245.6591369703 1.3720351528288863 2.092084861000061 1.535398069775135 1.3331831888232266 1.6431452276239087 1.0853030613918275 0.7024840483120405 0.8852772434957927 1.3977586817345082 1.0 20.00641053929083 -6.319624026799865 4.433783722633402 0.976821466933326 1.6065650053952436 0.5698571743104313 0.25242267768421556 0.16293686019751732 6.672006749683056 0.09306798703794587 0.08282961998849388 4.790446267242077e-07 6.319624026799865 0.6297435384619176 MKEDGGAEFSARS(ph)RK ddPTM_KYSE-520_SHP099_60min_R1 1 MKEDGGAEFSARSRK 15 3 C9J2U0;P24864-3 C9J2U0 CCNE1 G1/S-specific cyclin-E1 1 MKEDGGAEFS(0.031)ARS(0.969)RK 40.015 0.068123 0.0 223380.0 297310.0 186490.0 206500.0 200200.0 295630.0 223290.0 332210.0 355840.0 336100.0 True False 210988.66610301007 283026.781328592 198511.44379455023 226125.69791351122 215954.6010178187 293784.8635116196 245862.33230039632 331057.6410483968 291228.425996419 333122.415481843 0.6333667633798425 0.849617942758999 0.5959113964378966 0.6788066110364654 0.6482740007316902 0.8819126238823533 0.7380540031951022 0.9938017547379404 0.8742384554794168 1.0 18.34569290925499 -6.950211693616314 0.9608553493016484 0.971855967103788 0.6867419662995381 0.6068411795984621 0.08913509780623077 0.3872203468025433 0.6708826337246736 0.06997559159833472 0.03449627215016982 1.1214716680226688e-07 6.950211693616314 -0.28511400080424987 MKEEQVQGPVELLS(ph)IPEDAPEKDWTSR ddPTM_KYSE-520_SHP099_60min_R1 1 MKEEQVQGPVELLSIPEDAPEKDWTSR 27 2 Q9H501;A0A087WX71 Q9H501 ESF1 ESF1 homolog 1 MKEEQVQGPVELLS(1)IPEDAPEKDWTSR 94.96799999999999 0.0027971999999999997 413550000.0 171550.0 143000.0 145580.0 151200.0 134770.0 158030.0 123220.0 144940.0 177770.0 154570.0 True False 162033.7795235533 136130.06535262393 154964.3197362359 165570.00254006256 145375.63226359352 157043.67615174802 135676.28011131161 144437.2369692502 145491.44921701733 153200.63005364037 1.057657396492561 0.888573795714551 1.0115122873971079 1.0807396972329113 0.9489232009861378 1.0250850541330154 0.8856117632401843 0.9427979305220753 0.9496791832127335 1.0 17.225062704946374 -6.743739842996612 24.981238955333307 0.9397553559479451 0.9985101484272969 0.1939560508573882 0.05687612967886543 395.8488789226369 558703.3996217062 0.021498227130453684 0.01661535463185614 1.804098132699185e-07 6.743739842996612 0.05875479247935178 MKEIAEAYLGK ddPTM_KYSE-520_SHP099_60min_R1 2 MKEIAEAYLGK 11 1 E9PKE3;P11142;P11142-2;E9PN89;E9PLF4;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PI65 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ; 153.34 6.016e-05 228560000.0 775120.0 757870.0 537410.0 440150.0 696860.0 639510.0 470190.0 531140.0 656720.0 479510.0 False True 732122.5484365873 721460.7876139387 572052.3084864017 481981.7236640772 751698.9174089768 635518.5808758109 517721.3938121873 529297.5993090079 537476.2025639849 475261.91445313464 1.5404612197445111 1.5180277772606616 1.2036569543861724 1.0141391704375782 1.5816519156051616 1.3371965258505458 1.089339116112237 1.11369664433989 1.1309052676405553 1.0 18.858363269026565 -1.0000000000037963 0.15304163098808438 0.9575324607292157 3.02828363985261 0.4464948326499708 0.15827193388417948 70.78448915291507 0.7081859642411128 0.5802799210808324 32.69820644151354 0.09999999999912587 1.0000000000037963 2.0707511791233943 MKETAEAYLGK ddPTM_KYSE-520_SHP099_60min_R1 2 MKETAEAYLGK 11 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 162.32 2.1598000000000002e-05 2117700000.0 5363600.0 4845400.0 3236100.0 3116900.0 5069000.0 4689700.0 3847700.0 4564300.0 4387700.0 4025100.0 False True 5066070.415928476 4612619.710906318 3444704.1839430695 3413129.2388698477 5467901.461335273 4660429.842744111 4236663.065933247 4548467.508615632 3591004.2849159413 3989440.745480411 1.2698698236507875 1.1562070989854654 0.8634554073388689 0.8555407779239584 1.3705934766745922 1.168191267917403 1.0619691671653253 1.1401265988894647 0.9001272393841534 1.0 21.927755087633493 -7.758217246664431 24.985887926419935 0.9500635981016725 1.1044606083537292 0.149594760966565 0.15265506719915012 166.34218355686002 1289975.6855374193 0.1210670220412034 0.04143921977531599 1.7449490605624283e-08 7.758217246664431 0.15439701025205665 MKETIMNQEK ddPTM_KYSE-520_SHP099_60min_R1 1 MKETIMNQEK 10 1 P20290-2;D6RDG3 P20290-2 BTF3 Transcription factor BTF3 0 131.17 0.00037722 304280000.0 636180.0 600360.0 472420.0 383990.0 650560.0 650640.0 386910.0 558390.0 534550.0 571800.0 False True 600889.827206611 571517.8044412688 502872.94909872505 420484.29414919653 701755.3708199393 646579.1144173462 426022.63867771154 556453.0754192054 437489.1949089079 566734.2968536683 1.0602672725871076 1.0084404766292723 0.8873169523893621 0.7419425584151055 1.2382440496646592 1.1408858048770851 0.7517149412746963 0.981858833157723 0.7719476257881537 1.0 19.112312986578086 -6.764886749775875 24.999968753852695 0.8748686181978167 1.0048743283436201 0.17296008088613646 0.14555373512866998 187.04375706067995 1356396.9765823346 0.06220410293466547 0.04384123357830133 1.718356421583253e-07 6.764886749775875 0.13000571014580342 MKETIQGTGSWGPEPPGPGIPPAYS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 MKETIQGTGSWGPEPPGPGIPPAYSSPR 28 1 Q9H4L4 Q9H4L4 SENP3 Sentrin-specific protease 3 1 MKETIQGTGSWGPEPPGPGIPPAY(0.024)S(0.488)S(0.488)PR 60.527 0.007718000000000001 0.0 63767.0 82312.0 72578.0 56177.0 59788.0 50204.0 50100.0 51745.0 72305.0 56151.0 True False 60229.71739363698 78357.60796716908 77256.49400890584 61516.045189769095 64492.97545281385 49890.65821377177 55164.596928881016 51565.508672373806 59176.234660721326 55653.54582481695 1.0822260558783556 1.4079535599370196 1.3881684062339785 1.105339188690794 1.1588295857342343 0.8964506658895505 0.9912144161043211 0.9265448931985172 1.0632967546576977 1.0 15.764185987708128 -5.76355899392061 1.6969239063178099 0.9758816142620764 1.2956835603169106 0.6066240352675194 0.10426233425248052 0.22676658423372437 1.3516755622813594 0.03673985307607948 0.0489966404306527 1.723617941410097e-06 5.76355899392061 0.31980194605483414 MKGDY(ph)DVTVPK ddPTM_KYSE-520_SHP099_60min_R1 2 MKGDYDVTVPK 11 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MKGDY(0.994)DVT(0.006)VPK;MKGDY(0.999)DVT(0.001)VPK 90.697 0.0063872 830920000.0 2256000.0 2041580.0 1760880.0 1683110.0 1980020.0 1618650.0 1400180.0 1657920.0 1966390.0 1639970.0 True False 2130855.1827754937 1943499.432325946 1874389.1423076163 1843072.2683545258 2135836.3092272785 1608547.4049422708 1541723.858839932 1652169.0624814383 1609343.1446579872 1625441.1416773517 1.310939613954023 1.1956750586000169 1.1531571917598729 1.1338904996908057 1.3140040906207355 0.9896066758113139 0.9484956540776193 1.0164434873209283 0.99009622889036 1.0 20.63239988533547 -6.279402502536986 24.51807613057248 0.9874290484624777 1.2114290012853268 0.8051516677147739 0.05710302771744815 291.13798544291814 397376.23943727347 0.020460527936940816 0.01808242844103888 5.255299813544934e-07 6.279402502536986 0.22399995282284912 MKGDYFR ddPTM_KYSE-520_SHP099_60min_R1 4 MKGDYFR 7 1 P31946-2;P31946;P27348;E9PG15 P31946-2;P27348 YWHAB;YWHAQ 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein theta 0 ;;; 106.04 0.0041959 13477700000.0 12060470.0 10918150.0 6757300.0 6090830.0 10548480.0 10961120.0 7857120.0 8564690.0 8610430.0 9040310.0 False True 11391451.687149107 10393625.685522748 7192886.370062265 6669700.651925185 11378585.363358835 10892707.584258974 8651394.367701584 8534981.08940367 7046992.963276593 8960219.886654746 1.271336176036864 1.1599743998473633 0.8027577962428435 0.7443679659981296 1.269900237638808 1.215674137694149 0.9655337120227236 0.9525414774826652 0.7864754495335887 1.0 23.095102706238066 -6.988671847676958 24.68844560673464 0.9135125553321012 1.0645933638955125 0.15164503175536692 0.17693512259187175 429.1352044505544 935249.5258519573 0.0817605585270521 0.05506878103753313 1.0264272003205842e-07 6.988671847676958 0.15108080856341133 MKGDYHR ddPTM_KYSE-520_SHP099_60min_R1 1 MKGDYHR 7 1 P62258;P62258-2 P62258 YWHAE 14-3-3 protein epsilon 0 65.672 0.051826 274100000.0 565530.0 494090.0 381660.0 335770.0 552410.0 474220.0 360950.0 446190.0 535180.0 334650.0 False True 534158.9235438945 470353.1747557905 406262.41427759116 367681.47984706826 595881.524217048 471260.2170770231 397438.34853252716 444642.2710315294 438004.8027899148 331685.2613537601 1.6104391294438176 1.4180707723824173 1.2248431317672888 1.1085252276401762 1.7965269900295884 1.4208054200346238 1.1982393999371528 1.340554805530821 1.3205434603943984 1.0 18.339455380912284 -12.789123342077788 0.19330920586806402 8.989694657010772e-12 1.4537572156673686 0.3004773534330917 0.18644718586255912 114.65617364710945 1.716980313956426 45.27009230761111 0.5358821318888518 1.6250871563040966e-13 12.789123342077788 1.453757215658379 MKGDYYR ddPTM_KYSE-520_SHP099_60min_R1 2 MKGDYYR 7 1 P31947;P31947-2;P61981;Q04917;A2IDB2;P63104;E7EX29;B0AZS6;B7Z2E6;H0YB80;P63104-2;E7ESK7 P31947;P61981;P63104 SFN;YWHAG;YWHAH;YWHAZ 14-3-3 protein sigma;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein eta;14-3-3 protein zeta/delta 0 ; 104.44 0.0045981 65579000000.0 18254000.0 15202800.0 9910700.0 9142000.0 13226700.0 12928600.0 10698000.0 11208800.0 10853600.0 9838400.0 False True 17241414.23155316 14472434.668131959 10549559.57968067 10010852.931357466 14267566.040371524 12847907.811779335 11779458.242418537 11169919.288953587 8882859.836990593 9751239.430159366 1.7681254116505045 1.4841636052305849 1.0818685824749825 1.0266236413388792 1.4631541090298454 1.3175666440967864 1.2079960016145377 1.1454871320671731 0.9109467468839927 1.0 23.217154173427474 -4.533065774905216 3.21874913534236 1.1657498785049958 1.7443095864643487 0.6294962310362024 0.1540733236183239 0.1723709538383258 3.4979309550449584 0.042748617440768855 0.17912416424996347 2.9304493882920952e-05 4.533065774905216 0.578559707959353 MKLDYILGLK ddPTM_KYSE-520_SHP099_60min_R1 2 MKLDYILGLK 10 1 P46781;B5MCT8;C9JM19 P46781 RPS9 40S ribosomal protein S9 0 ; 127.42 0.0024888 0.0 189927.0 171109.0 143137.0 111320.0 219851.0 180327.0 114515.0 119742.0 125634.0 80818.0 False True 179391.37069991202 162888.66680015475 152363.84004729756 121899.81933042163 237152.02291892303 179201.5123040959 126091.29375869891 119326.64294999295 102822.03257541047 80102.01539545256 2.2395362939906276 2.0335152117708395 1.9021224284445077 1.5218071446594583 2.9606249199615804 2.2371660865135894 1.5741338483957446 1.4896834038556188 1.2836385210508416 1.0 16.289550921365038 -6.961489351200568 2.8507169970425363 1.298567660371333 2.1390337251494005 0.5608567432023523 0.358201046887814 0.23067013272553175 3.7976995689074875 0.18937587525465038 0.11190101044493607 1.0927244202084212e-07 6.961489351200568 0.8404660647780675 MKPAGS(ph)VNDMALDAFDLDR ddPTM_KYSE-520_SHP099_60min_R1 1 MKPAGSVNDMALDAFDLDR 19 1 H0YJN0;Q9UI08-5;Q9UI08;Q9UI08-2 H0YJN0 EVL Ena/VASP-like protein 1 MKPAGS(1)VNDMALDAFDLDR 87.48899999999999 0.00044478 0.0 236070.0 187070.0 163970.0 167530.0 178360.0 168140.0 151990.0 156580.0 201590.0 149780.0 True False 222974.72650612204 178082.87640220538 174539.76856127623 183452.00083026866 192395.91727041992 167090.57589163378 167354.63247945352 156036.86052604663 164986.33767035208 148453.06572707684 1.5019880216960244 1.19959042630754 1.1757235709915106 1.2357575771963882 1.2960050122786262 1.1255447981035367 1.127323519119007 1.051085471100423 1.1113703638405878 1.0 17.179647361386042 -1.0000000000000016 0.18513162755459484 0.9953325599339132 2.7244026936392007 0.6965432265602397 0.07391795423163586 34.87868780508861 0.40017468684811347 0.1664037100247773 17.10840008958809 0.09999999999999964 1.0000000000000016 1.7290701337052874 MKPILLQGHER ddPTM_KYSE-520_SHP099_60min_R1 1 MKPILLQGHER 11 1 Q5TFK1;Q13347 Q5TFK1 EIF3I Eukaryotic translation initiation factor 3 subunit I 0 128.28 0.00016346 465510000.0 569500.0 441820.0 342520.0 339340.0 626020.0 444120.0 408780.0 403750.0 413750.0 372570.0 False True 537908.6997298957 420594.3040146596 364599.3872513767 371590.771573709 675284.2124334401 441348.08234205097 450103.47170834284 402349.4854859586 338623.42978872074 369269.3196550735 1.4566839731834331 1.138990654321154 0.9873535867857668 1.0062866092444502 1.8287038117984145 1.1951929360237799 1.2189029733874852 1.0895827626887187 0.9170093797801062 1.0 18.49431387719108 -7.40348402542178 2.235391592319127 0.9598394832926626 1.25981616106721 0.2253930454855564 0.22911392768180627 0.550832970773272 5.104012284026545 0.18619868587092017 0.06826245902128367 3.949262255843262e-08 7.40348402542178 0.2999766777745475 MKPPAACAGDMADAAS(ph)PCSVVNDLR ddPTM_KYSE-520_SHP099_60min_R1 3 MKPPAACAGDMADAASPCSVVNDLR 25 1 P52888 P52888 THOP1 Thimet oligopeptidase 1 MKPPAACAGDMADAAS(0.973)PCS(0.027)VVNDLR;MKPPAACAGDMADAAS(1)PCSVVNDLR;MKPPAACAGDMADAAS(1)PCSVVNDLR 256.46 1.79e-30 3119110000.0 2191570.0 1894460.0 1681700.0 1416478.0 1540640.0 1853100.0 1473040.0 1738170.0 2370080.0 1815120.0 True False 2069999.2433135158 1803447.2979575663 1790105.0728151347 1551099.6432403612 1661879.6029575027 1841534.1155274552 1621949.2586850072 1732140.693961929 1939733.2168547467 1799039.4489419921 1.1506135924539476 1.0024501124853968 0.9950338075509618 0.8621821184369007 0.9237594005705919 1.0236207530693415 0.9015640316497057 0.9628141811901868 1.078204937637969 1.0 20.77879539136048 -4.20076722627428 1.948933927541885 0.9611582921313258 1.2271306018284018 0.4584540001737889 0.058997160488026994 0.837751016622809 2.9770061455047276 0.016136152985569394 0.42195116756087503 6.298436768434496e-05 4.20076722627428 0.2659723096970761 MKS(ph)LEQDALR ddPTM_KYSE-520_SHP099_60min_R1 4 MKSLEQDALR 10 1 A0A0G2JNZ2;A0A669KB89;Q14160;A0A0G2JMS7;A0A0G2JPP5;Q14160-2;Q14160-3;H0YCG0 A0A0G2JNZ2 SCRIB Protein scribble homolog 1 MKS(1)LEQDALR;MKS(1)LEQDALR;MKS(1)LEQDALR;MKS(1)LEQDALR 178.67 1.2322999999999999e-05 1678150000.0 1885260.0 2028510.0 1814830.0 2649260.0 2275150.0 2181410.0 1825060.0 2209350.0 2760810.0 1642170.0 True False 1780680.8696273624 1931057.3347444138 1931816.8456306665 2901044.873870936 2454191.3611672837 2167795.011037048 2009554.8756691332 2201686.2805161667 2259516.4983564904 1627621.6513889278 1.0940385734656588 1.1864288811202222 1.186895519595819 1.7823828230567804 1.5078389741700746 1.3318789469205967 1.2346572521656267 1.3527015191997243 1.3882320233503507 1.0 20.63433394638424 -10.437937836818113 5.916374792501227 0.9998362353047682 1.3464102192753944 0.23157546491164993 0.18583602907406724 0.0004360979728339181 4.142996675210725e-05 0.19547539008352097 0.047387581024777505 3.6480616008907404e-11 10.437937836818113 0.3465739839706262 MKS(ph)S(ph)RNMNRSEK ddPTM_KYSE-520_SHP099_60min_R1 1 MKSSRNMNRSEK 12 3 G3V217 G3V217 CCDC63 2 MKS(0.983)S(0.983)RNMNRS(0.034)EK 40.475 0.056557 174090000.0 75378.0 65996.0 60838.0 70529.0 72825.0 69008.0 60472.0 70054.0 92556.0 52061.0 True False 71196.63207768231 62825.45309798441 64759.71482424169 77232.05495468294 78555.9131824308 68577.29547478208 66585.09990984626 69810.99902472646 75750.16354688778 51599.78004284513 1.3797855730889788 1.2175527307639336 1.2550385829255357 1.4967516313161495 1.5224079078864878 1.3290230194361277 1.2904144136769244 1.3529321048802905 1.4680326831624035 1.0 15.655077295357419 -10.067215238908409 4.889087341981856 0.9999899677296678 1.3647040097751613 0.5648364313360283 0.0968617684133449 1.1554485651271583e-05 2.2045511395017975e-06 0.10229044667316804 0.024808395309856096 8.566131974537568e-11 10.067215238908409 0.3647140420454935 MKT(ph)PADTGFAFPDWAYKPES(ph)SPGSR ddPTM_KYSE-520_SHP099_60min_R1 2 MKTPADTGFAFPDWAYKPESSPGSR 25 2 P50548 P50548 ERF ETS domain-containing transcription factor ERF 2 MKT(1)PADTGFAFPDWAY(0.001)KPES(0.523)S(0.46)PGS(0.016)R;MKT(1)PADTGFAFPDWAYKPES(0.542)S(0.457)PGS(0.001)R 173.41 7.2726e-10 1439320000.0 48848.0 67844.0 51002.0 134719.0 176232.0 366790.0 447480.0 613860.0 652940.0 496940.0 True False 46138.30406392615 64584.6724040799 54289.67052608526 147522.65325525586 190100.45577708405 364500.72755615733 492715.6453839451 611730.6629360012 534382.5552779394 492537.49821347004 0.0936747034109663 0.13112640689965974 0.11022444123138751 0.29951557757602093 0.3859613866286641 0.7400466540685183 1.0003616926043626 1.2419981527393713 1.0849581142882514 1.0 18.90987403946721 -6.329916392554555 1.1854661322804763 1.1408947171516304 0.12200952938345573 0.9723731565315331 0.07127172380081127 0.06683065355800953 0.19293015237501934 0.037452028578075926 0.031720102606145696 4.6782519517092083e-07 6.329916392554555 -1.0188851877681746 down MKT(ph)PVQYSQQQNS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 3 MKTPVQYSQQQNSPQK 16 1 P46013 P46013 MKI67 Antigen KI-67 2 MKT(1)PVQYS(0.024)QQQNS(0.976)PQK;MKT(1)PVQYSQQQNS(1)PQK;MKT(1)PVQYSQQQNS(1)PQK 197.79 1.7888e-12 3747770000.0 2608210.0 2348810.0 2185180.0 2179670.0 2010440.0 1951880.0 2122040.0 2332310.0 2603100.0 2173670.0 True False 2463527.3919622693 2235969.6419643117 2326040.1992116207 2386825.181458317 2168650.1901611523 1939697.5929068741 2336556.5123146237 2324219.760975248 2130442.6588109224 2154412.97488967 1.1434796488302943 1.0378556330774134 1.0796631037420947 1.1078772776053065 1.006608396550439 0.9003369435269059 1.0845443930889256 1.078818122646274 0.9888738527115605 1.0 21.03886339289161 -1.000008619368549 0.4378534780475927 1.0165944201389758 3.3861474129866163 0.28922720466610374 0.05664305475496726 126.63843296377773 1.5697162153375441 0.039077475400510826 266.0837734270396 0.09999801533674153 1.000008619368549 2.36955299284764 MKVEMMSEAALNGNGDDLNNYDS(ph)DDQEKQSK ddPTM_KYSE-520_SHP099_60min_R1 2 MKVEMMSEAALNGNGDDLNNYDSDDQEKQSK 31 2 J3KP58;P30622-2;P30622-1;P30622;F5H0N7;A0A3B3ITA2 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 MKVEMMSEAALNGNGDDLNNYDS(1)DDQEKQSK;MKVEMMSEAALNGNGDDLNNYDS(0.999)DDQEKQS(0.001)K 255.98 1.5773999999999998e-32 773370000.0 585690.0 724630.0 642150.0 431910.0 451050.0 428270.0 290740.0 359430.0 826230.0 393190.0 True False 553200.6081559306 689817.6871081959 683544.0164763283 472958.59654152306 486545.0688765589 425597.00807130977 320130.8365489591 358183.2212215927 676207.459563347 389706.6424971915 1.4195308671442965 1.7700947633017756 1.7539963191190777 1.2136272389684288 1.2484905716742185 1.0920958527782265 0.8214662046753954 0.9191098692247054 1.7351704739500822 1.0 18.572028996695842 -5.362446119351522 4.119455340070992 1.1225736325972855 1.6594964504296457 0.4590367879086691 0.24921500192894316 0.20240936364906453 6.001358085479925 0.07300321921267243 0.11202336565656465 4.34064112372043e-06 5.362446119351522 0.5369228178323602 MLAES(ph)DES(ph)GDEESVSQTDKTELQNTLR ddPTM_KYSE-520_SHP099_60min_R1 21 MLAESDESGDEESVSQTDKTELQNTLR 27 1 P22059 P22059 OSBP Oxysterol-binding protein 1 2 MLAES(0.999)DES(0.821)GDEES(0.17)VS(0.009)QT(0.001)DKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(0.988)GDEES(0.008)VS(0.002)QT(0.002)DKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(0.998)GDEES(0.003)VSQTDKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(0.999)GDEES(0.001)VSQTDKTELQNTLR;MLAES(1)DES(0.997)GDEES(0.003)VSQTDKTELQNTLR;MLAES(1)DES(0.997)GDEES(0.002)VSQTDKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(1)GDEESVSQTDKTELQNTLR;MLAES(1)DES(0.99)GDEES(0.01)VSQTDKTELQNTLR 190.25 1.6091999999999998e-15 27814684000.0 16055233.0 16026208.0 14665710.0 14366538.0 15370499.0 14270457.0 13990666.0 14955391.0 19066724.0 14538574.0 True False 15164617.220176497 15256284.91185137 15611085.132565673 15731929.452062843 16580069.825123753 14181389.784505768 15404979.055021951 14903514.239235487 15604687.554597966 14409773.545199417 1.0523841455668508 1.0587456398254065 1.0833678325060474 1.091754107218701 1.1506127957609276 0.9841507737802212 1.0690646183092922 1.034264292390671 1.0829238575922404 1.0 23.780544327428228 -6.269306225364376 24.999111162068164 1.0384087257387917 1.0858033973977192 0.3421393043688832 0.03667190447150365 830.14655467555 2638015.6951208278 0.012882508724781718 0.011564443729538548 5.378903769090039e-07 6.269306225364376 0.04739467165892752 MLAESDES(ph)GDEESVSQTDKTELQNTLR ddPTM_KYSE-520_SHP099_60min_R1 1 MLAESDESGDEESVSQTDKTELQNTLR 27 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 MLAESDES(0.98)GDEES(0.015)VS(0.003)QT(0.001)DKTELQNTLR 93.77600000000001 0.0031557 150850000.0 83317.0 106620.0 103060.0 89127.0 88224.0 95645.0 80613.0 90668.0 98314.0 91375.0 True False 78695.23992167828 101497.8151601172 109703.41250183029 97597.60328299043 95166.72687410601 95048.04407728866 88762.14874706347 90353.49387007035 80462.6558942556 90565.48858867426 0.8689318762370104 1.120711837829251 1.2113158578548135 1.0776467372274032 1.0508056474616885 1.0494951836341662 0.9800880018458124 0.9976592107887063 0.8884472125987948 1.0 16.466673772786788 -6.75256088130257 1.4150826071944829 0.954044116511288 1.079679599629559 0.2362407436798929 0.0848674686915266 0.5930402218270443 2.4076134711622728 0.052458517111541376 0.03110014756397295 1.7678243789991054e-07 6.75256088130257 0.125635483118271 MLDAEDIVGTARPDEK ddPTM_KYSE-520_SHP099_60min_R1 2 MLDAEDIVGTARPDEK 16 1 P12814-3;P12814;P12814-2;P12814-4;H9KV75;G3V2N5;G3V2W4 P12814-3 ACTN1 Alpha-actinin-1 0 ; 164.01 6.164399999999999e-08 1324050000.0 1028980.0 1057340.0 706050.0 643020.0 999100.0 1022100.0 773650.0 840320.0 868490.0 901620.0 False True 971900.4281792251 1006543.7993003037 751563.112719942 704132.427468988 1077723.4858986135 1015720.6947712548 851858.0920963829 837405.1260521618 710794.1088512527 893632.3482497457 1.0875842062821182 1.126351123335793 0.8410204869955097 0.7879442019395233 1.2060032159863348 1.1366203302293494 0.9532534198933362 0.9370801400512083 0.7953988127706019 1.0 19.76932188475984 -6.991503337282182 24.667337997158995 0.9087770140521282 1.0253234870827148 0.1486104226275834 0.1309232483812092 353.23497503342196 1025500.8862935451 0.059833740261388164 0.04026382248306583 1.0197569238187691e-07 6.991503337282182 0.11654647303058663 MLDAEDIVNTARPDEK ddPTM_KYSE-520_SHP099_60min_R1 6 MLDAEDIVNTARPDEK 16 1 O43707 O43707 ACTN4 Alpha-actinin-4 0 ;;;;; 234.57 6.4001e-23 6852140000.0 6547540.0 6189560.0 4695740.0 3787520.0 6144670.0 6308110.0 4932800.0 5679300.0 5412570.0 5574660.0 False True 6184334.904002607 5892204.246881026 4998434.913849647 4147484.7620405927 6628220.570610188 6268738.7456154125 5431455.563488707 5659599.833858587 4429783.727786187 5525272.84941985 1.1192813590467225 1.0664096430097028 0.9046494263852471 0.7506389050951712 1.199618688750574 1.1345573180650483 0.9830203342915466 1.0243113757636133 0.8017312173554129 1.0 22.39761427885728 -7.723201989642035 24.650399704259712 0.9008654186065905 1.0195452641177472 0.12608523636293223 0.1281879522003453 275.7056455307035 177738.75112011103 0.09126763284741071 0.03449415677459091 1.8914636974125265e-08 7.723201989642035 0.11867984551115662 MLDAKEQEMT(ph)EMRDVMQQQLAEY(ph)QELLDVK ddPTM_KYSE-520_SHP099_60min_R1 2 MLDAKEQEMTEMRDVMQQQLAEYQELLDVK 30 2 Q03252 Q03252 LMNB2 Lamin-B2 2 MLDAKEQEMT(1)EMRDVMQQQLAEY(1)QELLDVK;MLDAKEQEMT(1)EMRDVMQQQLAEY(1)QELLDVK 42.582 0.064387 695310000.0 494098.0 435567.0 410185.0 279423.0 456456.0 405299.0 508212.0 515996.0 524470.0 418869.0 True False 466689.39898005634 414641.7075206039 436626.1814192049 305979.27790841146 492376.4903206263 402769.3786029694 559587.0286311466 514206.1303103724 429239.4688127866 415158.1465351505 1.1241243918130432 0.9987560426819112 1.0517104989104118 0.7370186047463358 1.185997419127937 0.9701589188708546 1.347888830561025 1.2385789237230727 1.0339179717299463 1.0 18.663301482608222 -6.722402136075203 24.99986218978073 1.1749785901549286 1.008035382054367 0.188567909807403 0.14369557481551076 229.97440279638323 147277.66597629135 0.05401869881043795 0.04184203433183301 1.8949504744163443e-07 6.722402136075203 -0.1669432081005615 MLDGT(ph)VKT(ph)IMVDDSK ddPTM_KYSE-520_SHP099_60min_R1 2 MLDGTVKTIMVDDSK 15 1 Q9Y490 Q9Y490 TLN1 Talin-1 2 MLDGT(1)VKT(1)IMVDDSK;MLDGT(1)VKT(1)IMVDDSK 57.136 0.032695999999999996 217676000.0 322050.0 301780.0 214278.0 259325.0 239796.0 267071.0 194407.0 212351.0 234271.0 244662.0 True False 304185.2445092415 287282.0358189853 228090.70273692213 283971.17003109556 258666.58094739667 265404.1108240426 214059.55678948047 211614.40394409583 191733.29189131915 242494.48502415544 1.25440067009747 1.184695131480489 0.9406016087920577 1.171041766177934 1.0666905720417943 1.0944748322734228 0.8827398972317144 0.8726565633977879 0.790670731634248 1.0 17.88759241134987 -6.747549806876518 4.408596418141443 0.8730742665600599 1.1158750490257032 0.608433949545462 0.09113641639999813 0.1386343182958389 6.379729040463482 0.038093657605633026 0.02729627490390562 1.7883404222918572e-07 6.747549806876518 0.2428007824656433 MLEDSQRT(ph)EEENGK ddPTM_KYSE-520_SHP099_60min_R1 1 MLEDSQRTEEENGK 14 1 Q6P996-4 Q6P996-4 PDXDC1 Pyridoxal-dependent decarboxylase domain-containing protein 1 1 MLEDS(0.164)QRT(0.836)EEENGK 82.069 0.0033192 0.0 260330.0 284350.0 273340.0 189770.0 208740.0 271610.0 206050.0 262460.0 336130.0 290670.0 True False 245888.97594501099 270689.3991819483 290959.9337594636 207805.6837435689 225166.6504318652 269914.7812413863 226879.54485421043 261549.5875186245 275097.26514775254 288094.8899378381 0.8534999562056313 0.9395841739516957 1.0099447922253801 0.721309856583735 0.7815711360949483 0.9368954142144816 0.7875167272254082 0.9078591695085559 0.9548842230666083 1.0 18.136184545463156 -7.770314224509656 2.5097843198578222 0.9941097251037033 0.8639964571325246 0.24543018728433375 0.0813563230129282 0.42254244294389043 5.022078616026889 0.07972278140029823 0.022660395471818025 1.6970153688902806e-08 7.770314224509656 -0.13011326797117873 MLERPPVCS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 MLERPPVCSK 10 1 O15519-6 O15519-6 1 MLERPPVCS(1)K;MLERPPVCS(1)K 143.01 0.00038968 1005040000.0 4453500.0 4245300.0 3541700.0 3982700.0 3582900.0 3969500.0 3761800.0 4558000.0 5607800.0 4108000.0 True False 4206455.477167853 4041349.415674784 3770003.648920364 4361214.610557585 3864853.84608762 3944724.87808874 4142079.455630036 4542189.361845202 4589564.881133984 4071606.3159756423 1.0331194007296598 0.9925688050482336 0.9259253857938355 1.0711287565906398 0.9492209084466753 0.9688374985103395 1.0173084365690956 1.1155767550568794 1.1272123395442342 1.0 21.957166643152547 -7.107631343106149 4.477666671288806 1.0901353207661024 0.9893523100229297 0.39332810672424434 0.04990538050053257 0.20707430434930604 6.755928928506158 0.023735124573389877 0.01338551787753936 7.804923611679798e-08 7.107631343106149 -0.10078301074317275 MLESGLPEMNDPYVLS(ph)PEDDDDHQK ddPTM_KYSE-520_SHP099_60min_R1 2 MLESGLPEMNDPYVLSPEDDDDHQK 25 0 Q8TF68-3;Q8TF68-2;Q8TF68;F5H8L7;E9PHB3 Q8TF68-3 ZNF384 Zinc finger protein 384 1 MLESGLPEMNDPYVLS(1)PEDDDDHQK;MLESGLPEMNDPY(0.001)VLS(0.999)PEDDDDHQK 144.43 8.304799999999999e-07 170551000.0 180278.0 210125.0 142850.0 154362.0 179127.0 180782.0 208070.0 195458.0 223311.0 181936.0 True False 170277.61996471678 200030.27959594462 152058.33956808143 169032.51806937237 193223.27580678713 179653.67248032222 229103.7461675102 194780.00181824004 182763.35161220288 180324.1885840663 0.9442860733313887 1.1092814622742164 0.8432498200162013 0.937381276447947 1.0715327617664967 0.9962816075369085 1.2705103401072735 1.0801656912901316 1.0135265437614847 1.0 17.460233406479716 -5.806604356644678 6.687342186103321 1.0828424757161086 0.9611311404200695 0.24870330431480403 0.09548968932759305 0.279236505349883 30.436653902916035 0.030336620042712256 0.034896789729706064 1.560973906396391e-06 5.806604356644678 -0.12171133529603906 MLESGLPEMNDPYVLS(ph)PEDDDDHQKDGK ddPTM_KYSE-520_SHP099_60min_R1 3 MLESGLPEMNDPYVLSPEDDDDHQKDGK 28 1 Q8TF68-3;Q8TF68-2;Q8TF68;F5H8L7;E9PHB3 Q8TF68-3 ZNF384 Zinc finger protein 384 1 MLESGLPEMNDPYVLS(1)PEDDDDHQKDGK;MLESGLPEMNDPYVLS(1)PEDDDDHQKDGK;MLESGLPEMNDPYVLS(1)PEDDDDHQKDGK 208.37 2.3761e-22 850890000.0 509600.0 625780.0 461820.0 490320.0 519670.0 535570.0 546870.0 524360.0 588450.0 497460.0 True False 481331.47213758563 595716.5894850702 491589.6561381263 536919.8653799165 560565.0724821665 532227.3089703955 602152.9565368701 522541.11754654365 481602.3136173354 493052.8914180238 0.9762268521603691 1.2082204563729153 0.997032295509536 1.088970118065287 1.1369268535673265 1.0794527691333597 1.2212745671262037 1.0598074296729332 0.9767761674254531 1.0 18.911382892020796 -7.589781745494782 5.17078461135013 0.9926826650480104 1.1038722629987856 0.2655494098876814 0.07398547945222134 0.2629397664686582 13.324750101946696 0.05018879994717001 0.01807743618160612 2.571687858703633e-08 7.589781745494782 0.11118959795077521 MLFDYLADK ddPTM_KYSE-520_SHP099_60min_R1 3 MLFDYLADK 9 0 P60228;H0YBR5;E5RIT4;E5RGA2 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E 0 ;; 161.92 0.0010122999999999998 341573700.0 428362.0 489471.0 343524.0 265275.0 449037.0 477212.0 350346.0 357366.0 378655.0 350810.0 False True 404599.905941524 465956.0784490507 365668.10669783404 290486.65624216263 484373.657228962 474233.54289519653 385762.39272745984 356126.3807558513 309900.79711576586 347702.0963260498 1.163639535730954 1.3401014356039742 1.0516706990312104 0.8354469510294965 1.3930708567680061 1.3639076321544368 1.1094623725412338 1.0242284545270666 0.8912825099137837 1.0 18.407492239661913 -7.2717255777247205 2.8782589222628787 0.953671176657056 1.186493411534387 0.2785220290067407 0.15798996542347657 0.3988535022280948 6.582175757654636 0.10606487027767308 0.047731236191719886 5.3490224700771655e-08 7.2717255777247205 0.232822234877331 MLFKDDYPSS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 1 MLFKDDYPSSPPK 13 1 H3BPC4;H3BQQ9;B0QYN7;P63279 H3BPC4 UBE2I SUMO-conjugating enzyme UBC9 1 MLFKDDYPS(0.136)S(0.864)PPK 86.455 0.0021094 486770000.0 790520.0 842500.0 658320.0 552690.0 712530.0 681580.0 610400.0 660000.0 802470.0 588850.0 True False 746668.2797374498 802025.035381718 700756.3605492424 605217.4914276919 768602.0572588729 677326.0064007356 672105.188929919 657710.6140451573 656761.6766224876 583633.247118368 1.279345005487695 1.3741935356521204 1.2006793033281744 1.03698254754316 1.3169264449100015 1.1605336223475382 1.151588248696202 1.1269245151686251 1.1252986012451895 1.0 19.15470254427002 -1.0000000000007825 0.09782481232123276 0.905441941876695 2.075827056161668 0.5139795775467335 0.0784196986497223 115.3293785265008 0.8038652569633264 1.1284694695254538 18.109238210883692 0.09999999999981983 1.0000000000007825 1.170385114284973 MLGEDS(ph)DEEEEMDTSER ddPTM_KYSE-520_SHP099_60min_R1 4 MLGEDSDEEEEMDTSER 17 0 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER;MLGEDS(1)DEEEEMDTSER 442.92 3.0054999999999994e-118 2567210000.0 1847230.0 1668150.0 1497800.0 1570020.0 1679120.0 1601140.0 1546860.0 1705860.0 1953290.0 1540010.0 True False 1744760.4695382891 1588009.5700558017 1594350.5845647338 1719234.2287562755 1811257.1911140804 1591146.6913472747 1703231.704698781 1699942.769810718 1598621.7744338599 1526366.709509649 1.1430807935393192 1.0403853544250552 1.0445396736128534 1.1263572626715541 1.1866461577217924 1.0424406411867018 1.1158732001210576 1.1137184525970374 1.0473379460348837 1.0 20.541670180535814 -7.980655698782086 3.747458481124717 1.0003346985382566 1.099654538554762 0.34398433365429937 0.04528840959654707 0.22792030466192104 7.803764853913954 0.04486877263051979 0.011843704623031547 1.045548783888132e-08 7.980655698782086 0.0993198400165054 MLGEDS(ph)DEEEEMDTSERK ddPTM_KYSE-520_SHP099_60min_R1 2 MLGEDSDEEEEMDTSERK 18 1 A0A087X0M4;Q9BWU0;A0A087WWF4;H7C256 A0A087X0M4 SLC4A1AP Kanadaptin 1 MLGEDS(1)DEEEEMDTSERK;MLGEDS(1)DEEEEMDTSERK 231.06 1.4676e-19 678010000.0 800770.0 696590.0 643030.0 694610.0 715160.0 709100.0 676470.0 749130.0 822670.0 704210.0 True False 756349.691804581 663124.7707970935 684480.7426843769 760625.5255578886 771439.0232962182 704674.2438727102 744854.1893109806 746531.4428782559 673293.8658230497 697971.2472670891 1.083640185417484 0.9500746246977405 0.9806718333519692 1.089766274092411 1.105259029389524 1.0096035425984475 1.0671703056930526 1.0695733467550483 0.96464412890837 1.0 19.41280808067177 -5.244307702958056 24.759376507709685 1.0487356733654625 0.9993234544799307 0.09905618702290642 0.051490742004532346 1380.624046024899 1995330.2751031348 0.013799990133133174 0.023814740741199814 5.697604469870552e-06 5.244307702958056 -0.04941221888553182 MLGTPEEAES(ph)S(ph)EDEAGPWILLSDDKGDHPPPPESK ddPTM_KYSE-520_SHP099_60min_R1 1 MLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESK 35 1 Q96NA2-2;Q96NA2 Q96NA2-2 RILP Rab-interacting lysosomal protein 2 MLGT(0.107)PEEAES(0.933)S(0.935)EDEAGPWILLS(0.024)DDKGDHPPPPESK 70.794 0.022309 150180000.0 60356.0 50293.0 57431.0 50922.0 56460.0 53562.0 49809.0 46720.0 71534.0 61978.0 True False 57007.93236329693 47876.84878866797 61133.09415284894 55761.611569742396 60903.08078654363 53227.69969018488 54844.1798089947 46557.93922452997 58545.228825392966 61428.92313815439 0.9280307947949112 0.7793860992971073 0.995184206881828 0.9077419678078006 0.991439824682778 0.8664924757101007 0.8928071176772785 0.757915601414998 0.9530564078703454 1.0 15.906630472327734 MLHDYIGDKDFK ddPTM_KYSE-520_SHP099_60min_R1 2 MLHDYIGDKDFK 12 1 E9PLK3;P55786-2;P55786;E9PJ74;E9PRQ5;A6NEC2-2;A6NEC2 E9PLK3 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein 0 ; 180.18 5.9234e-07 3457600000.0 7546000.0 6476700.0 3688500.0 3907400.0 6341900.0 6978200.0 5042600.0 5944700.0 5203100.0 5061800.0 False True 7127408.337421947 6165549.610275099 3926266.6118086674 4278758.121197358 6840971.449524987 6934646.465368138 5552355.219033446 5924079.2232034085 4258348.199477202 5016956.390020808 1.420663801582773 1.228942237277356 0.782599310533848 0.8528593411153035 1.3635700448049166 1.3822417271080516 1.1067178558852129 1.1808113849637905 0.8487911531277115 1.0 22.25838096682958 -13.999703039032406 0.02417414548373121 2.777731964881312e-06 1.8533552190120952 0.07232665610673683 0.2169327457024987 9303.110428410426 16.952279380114426 931.6856260584685 449.0064841963137 1.0006840117265821e-14 13.999703039032406 1.8533524412801303 MLHDYIGDKDFKK ddPTM_KYSE-520_SHP099_60min_R1 1 MLHDYIGDKDFKK 13 2 E9PLK3;P55786-2;P55786;E9PJ74;E9PRQ5;A6NEC2-2;A6NEC2 E9PLK3 NPEPPS;NPEPPSL1 Puromycin-sensitive aminopeptidase;Puromycin-sensitive aminopeptidase-like protein 0 173.25 7.152500000000001e-07 1868100000.0 3348500.0 3260600.0 2569500.0 1928600.0 3061400.0 2866700.0 2109300.0 2528200.0 2844600.0 1755100.0 False True 3162752.0299307397 3103955.881739618 2735134.081345362 2111893.5641452665 3302314.7630167305 2848807.861951629 2322528.6287842067 2519430.2642863137 2328092.346530501 1739551.1794471394 1.8181425572864829 1.7843429491543392 1.5723217078411207 1.2140450876624764 1.8983717191156546 1.6376683225020328 1.335130955745923 1.4483220120531515 1.3383293196756707 1.0 20.73028369452998 -10.024306988250533 0.08932219626771103 5.104344165272163e-11 2.2502868445589694 0.5711896854516884 0.17963179555542455 54.182531140473515 0.9497502713668768 18.84400277241521 6.6930022451517726 9.45568534292601e-11 10.024306988250533 2.250286844507926 MLISAAS(ph)PDIR ddPTM_KYSE-520_SHP099_60min_R1 4 MLISAASPDIR 11 0 F8VSE7;Q96AV8-2;Q96AV8-3;Q96AV8;F8VXV5 F8VSE7 E2F7 Transcription factor E2F7 1 MLIS(0.018)AAS(0.982)PDIR;MLIS(0.261)AAS(0.739)PDIR;MLIS(0.216)AAS(0.784)PDIR;MLIS(0.112)AAS(0.888)PDIR 92.295 0.0026835 615379000.0 1391220.0 1299270.0 983223.0 950711.0 1031578.0 1300190.0 1012259.0 1039467.0 1189960.0 1356690.0 True False 1314046.2532716873 1236851.1189559712 1046603.1277924236 1041066.2875983146 1112757.3197240718 1292075.0319290082 1114588.0184158124 1035861.3315904208 973893.2604504799 1344670.7820888474 0.9772252589815426 0.9198170551713883 0.7783341035837802 0.7742164858978303 0.827531418504896 0.9608857789873775 0.8288928660176447 0.7703456826668653 0.724261487215189 1.0 20.358821567990248 -4.5834232782247835 4.967247621974227 0.8272829207234035 0.9651388834592561 0.25088833820735734 0.08186414229186405 0.23618839026572655 11.478992531300936 0.02125915247293292 0.06191421063064488 2.6096166930469748e-05 4.5834232782247835 0.13785596273585266 MLISAVS(ph)PEIR ddPTM_KYSE-520_SHP099_60min_R1 5 MLISAVSPEIR 11 0 E9PMT9;A0AVK6 E9PMT9 E2F8 Transcription factor E2F8 1 MLIS(0.345)AVS(0.655)PEIR;MLISAVS(1)PEIR;MLISAVS(1)PEIR;MLISAVS(1)PEIR;MLIS(0.094)AVS(0.906)PEIR 193.15 6.808199999999999e-07 1271059000.0 1457456.0 1552085.0 1248259.0 1096987.0 1265551.0 1264185.0 1123257.0 1347396.0 1604721.0 1398715.0 True False 1376608.0103134941 1477520.5068729182 1328723.7724250148 1201244.314658833 1365142.6636998071 1256294.752489385 1236806.7794918972 1342722.19776059 1313344.118124436 1386323.4732838047 0.992991922045944 1.065783372601413 0.9584514711257448 0.8664964114135845 0.9847215963718581 0.9062060743396209 0.8921487685426367 0.9685489884839533 0.9473576286012805 1.0 20.402832492638638 -4.912817979957238 6.050432489499969 0.9336884498606222 1.0279742587697154 0.41502813227908475 0.04253996247578593 0.17244926108776285 9.540399360669335 0.010704459827754075 0.022769544693783554 1.2223118440545362e-05 4.912817979957238 0.09428580890909322 MLLADQGQSWK ddPTM_KYSE-520_SHP099_60min_R1 3 MLLADQGQSWK 11 0 P09211;A8MX94;A0A087X2E9 P09211 GSTP1 Glutathione S-transferase P 0 ;; 276.57 4.3093e-20 2245310000.0 3456610.0 3876470.0 1932120.0 1915000.0 2844320.0 3716400.0 2578640.0 2843430.0 2454060.0 3046260.0 False True 3264864.9527187953 3690238.5624999 2056667.5467013018 2097001.0242342572 3068151.802032978 3693204.56907142 2839314.09630119 2833566.8049915493 2008464.5658182665 3019272.5063544144 1.0813415966420727 1.2222277236431487 0.6811798346697103 0.6945385088033199 1.016189097067486 1.2232100816665723 0.9403967645601777 0.9384932294213174 0.6652147368583712 1.0 21.52576954340787 -4.73680823435122 24.99671168451068 0.9032318718844569 1.1517848002845001 0.2681994736415657 0.16928404326901678 342.4654690926385 347542.79002026987 0.04660617783752455 0.12318787016714815 1.833123671776921e-05 4.73680823435122 0.24855292840004328 MLLADQGQSWKEEVVTVETWQEGSLK ddPTM_KYSE-520_SHP099_60min_R1 15 MLLADQGQSWKEEVVTVETWQEGSLK 26 1 P09211;A8MX94;A0A087X2E9 P09211 GSTP1 Glutathione S-transferase P 0 ;;;;;;;;;;;;;; 410.71 2.2907999999999995e-115 6045767000.0 5254224.0 4987179.0 3186985.0 5738101.0 3097946.0 2978570.0 2583470.0 3310329.0 3702273.0 2089317.0 False True 4962761.720684126 4747587.434931702 3392423.152456293 6283448.393817031 3341736.7252984364 2959979.6397855557 2844632.3598374473 3298846.241335593 3030033.549907372 2070807.276844027 2.3965348085156073 2.2926264013168667 1.6382128797743305 3.0342989731971564 1.6137362286998258 1.4293844110383147 1.3736828103930334 1.5930242655719922 1.4632136866571355 1.0 20.981761862293922 -5.977975611055293 24.85106689196628 1.4215412230715505 2.2914937672101945 0.6356393013007924 0.34652018256557787 147.39158421386782 166307.402537691 0.10307361791159847 0.11686619445373782 1.0520209511577357e-06 5.977975611055293 0.869952544138644 MLLNLHK ddPTM_KYSE-520_SHP099_60min_R1 1 MLLNLHK 7 0 O00487 O00487 PSMD14 26S proteasome non-ATPase regulatory subunit 14 0 60.788000000000004 0.039708999999999994 0.0 369870.0 348100.0 267450.0 251560.0 421810.0 384750.0 266000.0 297930.0 260010.0 266640.0 False True 349352.5737824348 331376.7534912479 284690.25493513007 275468.1867657279 455004.047229401 382348.6325342343 292889.8759098272 296896.55036738486 212798.73831870753 264277.7770427811 1.3219143043036943 1.2538956441941194 1.0772387225318782 1.0423433625337906 1.7216886426123723 1.4467680060451695 1.1082652472228656 1.1234260923850719 0.8052085979376912 1.0 18.011695589169875 -7.3089649334581095 2.0291208218391725 0.9235408700746947 1.2976095386921203 0.3849113772038335 0.1920917607041149 0.4033414729079604 3.0833910696407676 0.1547713118979057 0.06052907755406176 4.909475154695144e-08 7.3089649334581095 0.3740686686174256 MLLS(ph)WDGGESR ddPTM_KYSE-520_SHP099_60min_R1 5 MLLSWDGGESR 11 0 E7ER68;Q658Y4 E7ER68 FAM91A1 Protein FAM91A1 1 MLLS(1)WDGGESR;MLLS(1)WDGGESR;MLLS(1)WDGGESR;MLLS(1)WDGGESR;MLLS(1)WDGGESR 232.78 4.5486000000000004e-14 249576000.0 476124.0 481885.0 453867.0 459843.0 473908.0 471325.0 449424.0 510542.0 599320.0 507847.0 True False 449712.45259033685 458734.52127586806 483123.99303287547 503546.3404631608 511201.8634323291 468383.2858458689 494856.1638755574 508771.048963399 490498.59562773607 503347.8706789867 0.893442644316149 0.911366766401658 0.9598212710846866 1.0003942994412718 1.0156035084498278 0.9305359436885018 0.9831295465857947 1.0107742152104404 0.9744723762635218 1.0 18.941196285677112 -4.814811512701394 2.563287376951349 0.986740353270083 0.8963552290944655 0.6898763857938749 0.022741513625386494 0.16222658061248219 2.111704281320968 0.006475120950316495 0.019251640032511994 1.5317521101774147e-05 4.814811512701394 -0.0903851241756175 MLLVDELR ddPTM_KYSE-520_SHP099_60min_R1 2 MLLVDELR 8 0 U3KQF2;C9JPM4;C9JAK5;P18085 U3KQF2 ARF4 ADP-ribosylation factor 4 0 ; 136.16 0.0099112 0.0 95642.0 116182.0 80238.0 63319.0 103821.0 115355.0 82792.0 89244.0 85859.0 98746.0 False True 90336.5476023998 110600.44232726254 85410.26986533913 69336.81872244841 111991.1220393154 114635.02665623541 91161.42333205428 88934.43339370622 70269.16992925621 97871.18726322545 0.9230147311837429 1.1300613124248882 0.87268043081594 0.7084497558608991 1.1442705986401724 1.1712847249714409 0.9314429085944855 0.90868861286536 0.7179760652158703 1.0 16.578596580435086 -5.804683270554934 24.999970839641268 0.9816198828664765 0.9218078245328709 0.04595106599022314 0.15212396032654793 654.507457464175 378377.32572653505 0.051481576111129204 0.05837494010139353 1.5678941129358506e-06 5.804683270554934 -0.05981205833360559 MLNSS(ph)FEDDPFFSESILAHR ddPTM_KYSE-520_SHP099_60min_R1 5 MLNSSFEDDPFFSESILAHR 20 0 A0A0S2Z4A4;P58340;A0A494C175 A0A0S2Z4A4 MLF1 Myeloid leukemia factor 1 1 MLNS(0.141)S(0.859)FEDDPFFSESILAHR;MLNS(0.183)S(0.817)FEDDPFFSESILAHR;MLNS(0.137)S(0.863)FEDDPFFSESILAHR;MLNS(0.18)S(0.82)FEDDPFFSESILAHR;MLNS(0.159)S(0.841)FEDDPFFSESILAHR 219.64 4.602700000000001e-19 714921000.0 240963.0 308042.0 291040.0 381895.0 280226.0 289892.0 252783.0 252108.0 368414.0 270903.0 True False 227596.30204216854 293243.1999395312 309800.90408046433 418190.18597908196 302278.1919321635 288082.67649802275 278336.77256433776 251233.4961904493 301519.3045611639 268503.0101793449 0.8476489775297007 1.09214120073984 1.1538079363562246 1.5574878870063855 1.1257907005595902 1.0729215896149533 1.036624402752224 0.9356822332183146 1.122964336078638 1.0 18.034578736749808 -6.34209353385543 3.160054454361081 1.0232859719645433 1.17465383688565 0.11782913458524424 0.16764151325821203 0.5669332437686999 11.020052452476575 0.06755466588938547 0.059584385096737365 4.548900800770285e-07 6.34209353385543 0.15136786492110677 MLPDKDCR ddPTM_KYSE-520_SHP099_60min_R1 10 MLPDKDCR 8 1 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 0 ;;;;;;;;; 126.28 0.0023158000000000002 29333640000.0 64962750.0 64545040.0 45094830.0 38492250.0 63756280.0 60545380.0 46362250.0 54175250.0 53691590.0 51820360.0 False True 61359136.7574685 61444199.39431973 48001714.89607904 42150541.86688303 68773536.51238915 60167493.82525156 51048998.681956336 53987328.70234846 43942550.710839346 51361271.92602999 1.1946576565673324 1.1963138195411336 0.9345896839394993 0.8206677966929604 1.3390154475036393 1.171456460655885 0.9939200640411829 1.0511291227386366 0.8555580705657949 1.0 25.61417759444929 -7.299021306177769 1.9590630685312491 0.9420453713104063 1.0985125664596826 0.16421653217393883 0.1444493769546055 0.7339906665669249 5.210652531899607 0.11551468747885155 0.04519656227865667 5.023179455574673e-08 7.299021306177769 0.15646719514927632 MLPHAPGVQMQAIPEDAIPEES(ph)GDEDEDDPDKR ddPTM_KYSE-520_SHP099_60min_R1 45 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKR 33 1 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKR 285.41 1.1406e-53 514775190000.0 78375870.0 73204620.0 70673656.0 65113778.0 69716778.0 66718839.0 66772441.0 69118570.0 88851830.0 66718719.0 True False 74028204.25267671 69687760.17282522 75229392.94760773 71302171.88394873 75203091.7943948 66302421.97770422 73522450.97250482 68878813.81306545 72718577.44436094 66127643.056037895 1.1194744108744918 1.0538370483546557 1.137639109318577 1.0782506163651686 1.1372413762073177 1.0026430538514464 1.1118262737748028 1.0416039439768958 1.0996698821208213 1.0 25.978750145674635 -6.244549432728722 24.996398303516337 1.057541224026793 1.1027252446783997 0.29457090616422443 0.041207318375762456 1207.647462432469 1787267.226784252 0.01265002505441427 0.012622749751907632 5.69443404645784e-07 6.244549432728722 0.04518402065160676 MLPHAPGVQMQAIPEDAIPEES(ph)GDEDEDDPDKRIS(ph)ICS(ph)SDKR ddPTM_KYSE-520_SHP099_60min_R1 3 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKRISICSSDKR 42 3 Q13547 Q13547 HDAC1 Histone deacetylase 1 3 MLPHAPGVQMQAIPEDAIPEES(0.999)GDEDEDDPDKRIS(0.7)ICS(0.661)S(0.64)DKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKRIS(0.675)ICS(0.675)S(0.65)DKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKRIS(0.676)ICS(0.676)S(0.648)DKR 95.149 0.00017962 1642070000.0 309238.0 313065.0 301255.0 320926.0 305008.0 319076.0 279796.0 312595.0 386010.0 309253.0 True False 292083.9516893299 298024.88747985504 320674.37932504236 351426.71055007936 329010.3943418719 317084.5283287676 308080.51022581256 311510.6809052213 315920.3145202274 306513.259015193 0.9529243616663647 0.9723066742280235 1.0462006777630048 1.1465302077932626 1.0733969401485624 1.0344887831199845 1.0051131595926879 1.016304096945381 1.030690533699125 1.0 18.225589957167646 -4.726181703958648 4.8022887199147615 1.0478492296388606 0.95916722701519 0.398485823137412 0.04005533298020429 0.19898915312155277 10.607258923619415 0.011607738016270693 0.031006539856879865 1.878530696109149e-05 4.726181703958648 -0.08868200262367065 MLPHAPGVQMQAIPEDAIPEES(ph)GDEDEDDPDKRIS(ph)ICSSDKR ddPTM_KYSE-520_SHP099_60min_R1 3 MLPHAPGVQMQAIPEDAIPEESGDEDEDDPDKRISICSSDKR 42 3 Q13547 Q13547 HDAC1 Histone deacetylase 1 2 MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKRIS(0.392)ICS(0.352)S(0.256)DKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKRIS(0.448)ICS(0.295)S(0.257)DKR;MLPHAPGVQMQAIPEDAIPEES(1)GDEDEDDPDKRIS(0.462)ICS(0.29)S(0.248)DKR 223.51 4.1281999999999995e-23 3241820000.0 568990.0 534770.0 517660.0 558160.0 437900.0 493510.0 496610.0 550040.0 690820.0 478990.0 True False 537426.9904465564 509078.846493865 551029.1918852846 611207.3585830764 472360.23868982395 490429.8210317605 546812.1852465384 548132.0396203009 565384.5021550312 474746.52124858124 1.1320293385892028 1.0723171707609145 1.1606808417175556 1.287439362326666 0.9949735649405469 1.033035102062322 1.1517981928723242 1.154578317243307 1.1909186836547478 1.0 18.856797903361752 -5.780403209600391 24.999995066390767 1.0957662147578076 1.1564571188301327 0.17065974423954133 0.07985514235374017 588.6963713976999 776073.9586571698 0.026531672788668737 0.030132291068568837 1.6580468214708611e-06 5.780403209600391 0.060690904072325136 MLPHAPGVQMQAIPEDAVHEDS(ph)GDEDGEDPDKR ddPTM_KYSE-520_SHP099_60min_R1 35 MLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKR 33 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 1 MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR;MLPHAPGVQMQAIPEDAVHEDS(1)GDEDGEDPDKR 335.91 7.838099999999999e-82 346219210000.0 52008743.0 47349411.0 47339978.0 44684562.0 47813608.0 43913576.0 44658585.0 43015832.0 55494999.0 44513313.0 True False 49123714.348931186 45074674.22264511 50391588.72852295 48931369.337576516 51576266.927384436 43639495.08327005 49173110.597588286 42866620.1187627 45418506.09668062 44118959.67765344 1.1134377308042622 1.0216622185104638 1.1421753617197514 1.109078040259426 1.169027268644056 0.9891324591992535 1.1145573457955948 0.971614481210783 1.0294555091172155 1.0 25.39489543688187 -7.258835010856037 24.83811594951898 1.0004012442536792 1.0926264098337257 0.4069809212721677 0.05186215316499068 212.21036704386455 2023891.6056908548 0.025407891465633176 0.013788830566587024 5.510169888521259e-08 7.258835010856037 0.09222516558004656 MLPLLDS(ph)S(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 1 MLPLLDSSKR 10 1 Q8N9W5-6;Q8N9W5-3 Q8N9W5-6 2 MLPLLDS(1)S(1)KR 45.161 0.041052 789440000.0 620840.0 549590.0 523270.0 475860.0 539590.0 537730.0 499270.0 520390.0 622930.0 501570.0 True False 586400.7675861436 523186.8714485917 557000.821461602 521085.5913274741 582052.6631528699 534373.8276091841 549741.0840056372 518584.88854993857 509821.6147874028 497126.480015555 1.179580632212139 1.0524220545085856 1.1204408613360801 1.0481952023782146 1.1708341570029777 1.0749252938456701 1.1058374600935277 1.0431648874019186 1.025537031886635 1.0 18.923253426580043 -7.4924596520189715 1.4626310017577175 1.0031515598131995 1.1068423062797546 0.4775886886379769 0.04148735234497271 0.35724270831636373 1.3521760955680446 0.03466702244352735 0.0116276048253627 3.217661454552067e-08 7.4924596520189715 0.10369074646655507 MLPSLQESMDGDEKELES(ph)SEEGGSAEER ddPTM_KYSE-520_SHP099_60min_R1 1 MLPSLQESMDGDEKELESSEEGGSAEER 28 1 J3QKQ1;J9JIC5;Q9HAS0 J3QKQ1 C17orf75 Protein Njmu-R1 1 MLPSLQESMDGDEKELES(0.944)S(0.056)EEGGSAEER 148.89 7.3783e-07 65198000.0 142810.0 114530.0 102980.0 103200.0 100250.0 118280.0 104750.0 137040.0 144640.0 128590.0 True False 134888.0446153229 109027.80688696512 109618.25557382577 113008.0969717885 108139.10465552592 117541.77064626187 115339.15226148276 136564.64022537647 118377.02207768102 127450.79264150628 1.0583539091415157 0.8554502065251068 0.8600829645850858 0.8866802208885259 0.848477301821886 0.9222521744284751 0.9049700662585037 1.071508755614456 0.9288056953137359 1.0 16.95958082022858 -7.149982954120444 8.362117946057175 0.999894562973729 0.8988751974402852 0.3064436415061804 0.06500229410852458 0.34192196752942494 23.146551559776025 0.02979319476454532 0.017166775492977553 7.079735715099301e-08 7.149982954120444 -0.10101936553344382 MLQDDDDTVHLPFEGGS(ph)LLQIPVK ddPTM_KYSE-520_SHP099_60min_R1 2 MLQDDDDTVHLPFEGGSLLQIPVK 24 0 Q9Y6M7-7;Q9Y6M7-13;Q9Y6M7-6;Q9Y6M7;Q9Y6M7-9;Q9Y6M7-2;Q9Y6M7-8;Q9Y6M7-3;E9PFN4;Q9Y6M7-4;A0A0A0MST8;Q9Y6M7-12;H7C3C4;Q9Y6M7-5 Q9Y6M7-7 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 MLQDDDDTVHLPFEGGS(1)LLQIPVK;MLQDDDDTVHLPFEGGS(1)LLQIPVK 185.02 3.5611999999999996e-15 170670000.0 80822.0 143504.0 109067.0 147690.0 151229.0 160752.0 117898.0 160724.0 197227.0 103639.0 True False 76338.64254533734 136609.85243610461 116097.63333336997 161726.41319538254 163129.86192469372 159748.68714007313 129816.28041359721 160166.48595726377 161415.5484880726 102720.83908992201 0.7431660724510861 1.329913712216818 1.1302247368884701 1.574426519762041 1.5880892657223091 1.5551731134149793 1.2637774531802237 1.5592404362765546 1.5714002136097152 1.0 16.648369366919372 -3.940847538697926 1.1043171444668465 1.4569637254495127 1.4127463075024994e-11 0.4953960758071494 0.19908045690203563 2.4723006418243862 1.5619037344839948 0.05902968637244804 4.9523687362503805 0.00011459151502248713 3.940847538697926 -1.4569637254353853 MLQHIDYR ddPTM_KYSE-520_SHP099_60min_R1 2 MLQHIDYR 8 0 J3KRY3;S4R3P3;J3QLE5;P14678-2;P63162;P14678;P63162-2;P14678-3 J3KRY3 SNRPN;SNRPB Small nuclear ribonucleoprotein-associated proteins B and B;Small nuclear ribonucleoprotein-associated protein N 0 ; 123.92 0.0015186 759150000.0 1261420.0 1123810.0 856650.0 691880.0 1161200.0 1046780.0 856780.0 916170.0 924470.0 888240.0 False True 1191446.518021572 1069820.4807267988 911871.0296884612 757636.0671786923 1252579.833675778 1040246.6577366736 943391.6837669996 912992.0201056845 756609.551992213 880370.8846402635 1.3533461167430814 1.2151929367404601 1.0357805393133477 0.8605873733412674 1.4227865272800408 1.181600477577968 1.071584374524707 1.0370538554086222 0.8594213702346349 1.0 19.747751908081003 -7.246138865713313 2.0071787496401807 0.9389036193172094 1.167416966499247 0.28786815450391856 0.15148844252192156 0.5029715090524276 3.7981375149365855 0.11347576497475857 0.04697508041046389 5.673631619618946e-08 7.246138865713313 0.22851334718203764 MLRPVS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 MLRPVSR 7 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 MLRPVS(1)R 58.083 0.054823000000000004 0.0 38166.0 39526.0 49920.0 51852.0 58241.0 41347.0 52834.0 52314.0 51409.0 53591.0 True False 36048.855897965266 37627.111630264444 53137.92307482405 56779.99849012771 62824.23535403976 41088.9380361091 58174.976330149686 52132.53494417937 42074.421515428025 53116.22543316712 0.6786787954901525 0.7083920463740091 1.0004084936661064 1.0689765326335263 1.1827691979560488 0.7735666023145561 1.095239276807191 0.9814804142996669 0.7921199439965417 1.0 15.696865008494573 -4.749136904725304 6.941895163454813 0.9926596616817421 0.6905507157248115 0.4930835494643757 0.11886865343918222 0.11322799149021893 25.30856855475059 0.03070031100641876 0.07595150984825383 1.7818169882209175e-05 4.749136904725304 -0.3021089459569306 MLS(ph)FQGLAELAHR ddPTM_KYSE-520_SHP099_60min_R1 1 MLSFQGLAELAHR 13 0 C9JZL3;O15294 C9JZL3 OGT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit 1 MLS(1)FQGLAELAHR 151.04 3.772e-06 68050000.0 37443.0 44013.0 40520.0 35867.0 42654.0 39215.0 32956.0 40397.0 56824.0 41020.0 True False 35365.96214923003 41898.549415140136 43131.9840342923 39275.78889619321 46010.62713193821 38970.244638934324 36287.51409956493 40256.87223573066 46506.194016469504 40656.59471307707 0.8698702485738352 1.030547435436436 1.0608853087348957 0.9660373470373373 1.1316891504722855 0.9585221023540287 0.8925369759974796 0.9901683237327832 1.1438782402873235 1.0 15.311201763539477 -4.257863949890512 23.649864433880616 1.016332311142634 0.8698701263949444 0.27089936266035486 0.07342369733682222 235.75117756148134 1559234.2257166274 0.018657934913485583 0.13125015937997297 5.522504139907521e-05 4.257863949890512 -0.14646218474768946 MLS(ph)PANSLDIAMEK ddPTM_KYSE-520_SHP099_60min_R1 1 MLSPANSLDIAMEK 14 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 MLS(1)PANSLDIAMEK 106.93 0.000496 55034000.0 86654.0 109140.0 76114.0 87684.0 95484.0 91413.0 79479.0 118880.0 118290.0 86558.0 True False 81847.12987953363 103896.75057752017 81020.43022670587 96017.46099684417 102998.04757035646 90842.45755906943 87513.5129602901 118467.63302680047 96811.5178482363 85791.163461105 0.9540275079337341 1.21104256412869 0.9443913214143316 1.1191998933593603 1.2005670912372288 1.058878955526166 1.020076071120844 1.3808838608478593 1.128455588460781 1.0 16.38854143651241 -5.497186537318576 0.7361641126304693 1.1525825468460824 1.0379327640199743 0.06702448646337644 0.12448148477781885 2.355239712423198 2.508954167477233 0.06775893217355085 0.17173937493475439 3.182830145096324e-06 5.497186537318576 -0.11464978282610816 MLS(ph)SSDAITQEFMDLR ddPTM_KYSE-520_SHP099_60min_R1 15 MLSSSDAITQEFMDLR 16 0 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;E9PNZ4;A0A5F9ZGX0;E9PLY5;A0A669KBB0 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 MLS(0.907)S(0.084)S(0.009)DAITQEFMDLR;MLS(0.98)S(0.02)SDAITQEFMDLR;MLS(0.911)S(0.065)S(0.024)DAITQEFMDLR;MLS(0.856)S(0.141)S(0.002)DAITQEFMDLR;MLS(0.954)S(0.038)S(0.007)DAITQEFMDLR;MLS(0.972)S(0.023)S(0.005)DAITQEFMDLR;MLS(0.981)S(0.017)S(0.002)DAITQEFMDLR;MLS(0.856)S(0.141)S(0.003)DAITQEFMDLR;MLS(0.957)S(0.041)S(0.003)DAITQEFMDLR;MLS(0.99)S(0.01)SDAITQEFMDLR;MLS(0.965)S(0.028)S(0.007)DAITQEFMDLR;MLS(0.86)S(0.07)S(0.07)DAITQEFMDLR;MLS(0.985)S(0.015)SDAITQEFMDLR;MLS(0.981)S(0.018)S(0.001)DAITQEFMDLR;MLS(0.978)S(0.021)S(0.001)DAITQEFMDLR 239.86 4.4512000000000003e-23 2259086000.0 933218.0 1096837.0 857747.0 759038.0 823349.0 1085440.0 1071401.0 1429507.0 1611515.0 1403546.0 True False 881450.5372160376 1044143.304134098 913038.7440637249 831176.7433069041 888141.8820850143 1078665.3663364763 1179708.668946109 1424548.3738664433 1318904.498987238 1391111.6743822629 0.6336303213093619 0.7505819434645751 0.6563374895614825 0.5974910272218056 0.6384403915518879 0.7753981123157985 0.8480330448452102 1.0240359563505412 0.9480939045191399 1.0 20.407806809197503 -6.812778638534981 1.6659765867340837 0.9920983873951904 0.6583778237768572 0.9086845007211682 0.04595494177199201 0.10730352741023365 0.6049697392768618 0.027333311969095685 0.015966304599388845 1.5389388431137145e-07 6.812778638534981 -0.33372056361833324 MLWGSDPYPHAEPQQAT(ph)TPK ddPTM_KYSE-520_SHP099_60min_R1 3 MLWGSDPYPHAEPQQATTPK 20 0 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 MLWGSDPYPHAEPQQAT(0.5)T(0.5)PK;MLWGSDPYPHAEPQQAT(0.883)T(0.117)PK;MLWGSDPYPHAEPQQAT(0.682)T(0.318)PK 153.17 9.362600000000001e-07 3483320000.0 750800.0 804490.0 585370.0 560870.0 656490.0 771480.0 636960.0 922750.0 1106450.0 977210.0 True False 709151.6273173064 765841.092835892 623103.8868251157 614174.916168285 708152.0280828549 766664.9071540252 701350.1329305401 919549.1956214684 905546.5713346939 968552.6796578767 0.7321766200345458 0.7907066997186061 0.6433350502372421 0.6341161705166423 0.7311445654489299 0.7915572619393664 0.7241218238932332 0.9494054530377037 0.9349481864575104 1.0 19.885470993698274 -7.2950015209796115 1.4479571464405683 0.9907973107899054 0.7103220924612055 0.8051841222765705 0.05358382145401521 0.19207691126597812 0.7149688960008979 0.046936728760228814 0.017619275318709025 5.069889327025699e-08 7.2950015209796115 -0.2804752183286999 MLWGSDPYPHAEPQQATT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 MLWGSDPYPHAEPQQATTPK 20 0 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 MLWGSDPYPHAEPQQAT(0.267)T(0.733)PK;MLWGSDPYPHAEPQQAT(0.166)T(0.834)PK;MLWGSDPYPHAEPQQAT(0.031)T(0.969)PK;MLWGSDPYPHAEPQQAT(0.207)T(0.793)PK;MLWGSDPYPHAEPQQAT(0.48)T(0.52)PK 192.3 6.8778e-13 7668200000.0 2929971.0 3289556.0 2499515.0 2636557.0 2685069.0 3326183.0 2880147.0 4004198.0 4477478.0 4213552.0 True False 2767439.6678776173 3131520.792035777 2660637.7362653986 2887134.5845702332 2896368.654347213 3305423.058112059 3171300.366285943 3990308.371724843 3664480.8632351435 4176223.2073738473 0.6626656503874654 0.7498451678795648 0.6370918421140854 0.6913266942898301 0.6935377997117518 0.7914862051136923 0.7593704188718796 0.9554825433370661 0.8774628848297347 1.0 21.993767391281217 -7.134111148919682 0.8416387484906978 0.9840482620475579 0.6816987665825034 0.8540196407229149 0.04515189631532917 0.20697593563171682 0.26895868498164327 0.0377669273413526 0.017506462819720025 7.343259081895832e-08 7.134111148919682 -0.3023494954650545 MMGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 MMGSPK 6 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 MMGS(1)PK;MMGS(1)PK;MMGS(1)PK 75.738 0.0321 990280000.0 2699300.0 2527090.0 2244330.0 2324990.0 2701930.0 2746780.0 2429120.0 2262280.0 2888000.0 2491880.0 True False 2549564.448078855 2405684.80316058 2389003.102854966 2545956.350566268 2914556.519121248 2729636.32715369 2674679.1555266147 2254432.678700121 2363612.00055547 2469803.881853307 1.032294291385475 0.9740387975078356 0.967284536399016 1.0308334071674619 1.1800760945173527 1.1052036751620167 1.0829520413254723 0.912798257086075 0.9570039216157713 1.0 21.235965056514317 -7.258585329684735 24.97256649610157 0.9511758155211908 1.052903271762328 0.3384344213787972 0.06177683921215899 316.2762302944199 2767405.0513358684 0.03520039611315043 0.01915136079560835 5.513338662896552e-08 7.258585329684735 0.1017274562411371 MMS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 3 MMSPLK 6 0 B9EGE7;Q8TCN5-2;Q8TCN5 B9EGE7 ZNF507 Zinc finger protein 507 1 MMS(1)PLK;MMS(1)PLK;MMS(1)PLK 90.65700000000001 0.01525 2317430000.0 4483900.0 4043750.0 3469410.0 3400880.0 3770000.0 4145120.0 3406400.0 3720800.0 4237220.0 4045420.0 True False 4235169.128566949 3849482.180207502 3693053.719852269 3724098.612688147 4066677.5516342446 4119248.768525808 3750752.155260288 3707893.4132412476 3467847.6596238376 4009580.7260891367 1.0562623420972612 0.9600710007308442 0.9210573304641752 0.9288000085536516 1.01424009876484 1.0273514988046242 0.9354474723143174 0.9247583891041524 0.8648903455315403 1.0 21.935019954129892 -6.976988225517836 23.765143101937344 0.92291519298529 0.9795964597962094 0.20742172815017257 0.050059048553495265 208.96463135684758 215804.65729748792 0.021711873478943114 0.014636863245563098 1.0544154830496639e-07 6.976988225517836 0.05668126681091934 MMVDKDGDVTVTNDGATILSMMDVDHQIAK ddPTM_KYSE-520_SHP099_60min_R1 2 MMVDKDGDVTVTNDGATILSMMDVDHQIAK 30 1 B7ZAR1;E9PCA1;P48643 B7ZAR1 CCT5 T-complex protein 1 subunit epsilon 0 ; 320.67 4.082399999999999e-65 678840000.0 416520.0 362590.0 253970.0 427440.0 355240.0 299110.0 293500.0 361540.0 302470.0 220160.0 False True 393414.80528796546 345170.6321413142 270341.31256636773 468063.7690854774 383195.3669608886 297243.14354077895 323169.84428396355 360285.9021240701 247549.07264820347 218209.5536818883 1.8029220015797112 1.5818309799785997 1.238906858131787 2.1450195978487416 1.7560888627246862 1.3621912447248206 1.4810068525005518 1.6511004951199546 1.1344557031131968 1.0 17.735354741761725 -7.874631659449371 0.8217264049839316 0.9830193416298352 1.6611986317630192 0.4447444060656147 0.24394100859977147 0.6122282683110841 0.9351532145615484 0.24111582271867668 0.09017917102774368 1.334652918737095e-08 7.874631659449371 0.678179290133184 MNDFHIS(ph)DDEEKNPSK ddPTM_KYSE-520_SHP099_60min_R1 6 MNDFHISDDEEKNPSK 16 1 A8MSM7;A0A0C4DG83;A2VCS9;E7ETZ8;Q49MG5-2;Q49MG5 A8MSM7 MAP9 Microtubule-associated protein 9 1 MNDFHIS(0.855)DDEEKNPS(0.145)K;MNDFHIS(1)DDEEKNPSK;MNDFHIS(1)DDEEKNPSK;MNDFHIS(1)DDEEKNPSK;MNDFHIS(1)DDEEKNPSK;MNDFHIS(1)DDEEKNPSK 287.37 1.6911999999999999e-37 10829730000.0 9480860.0 9362250.0 8277020.0 8880980.0 9068160.0 8779020.0 8241870.0 9323740.0 10679950.0 9200160.0 True False 8954937.79617416 8912473.45697626 8810569.952900246 9725025.669035988 9781772.601227487 8724226.879767887 9075038.65249974 9291398.122117285 8740740.299630314 9118653.74001618 0.9820460400723879 0.977389175099925 0.9662138956144434 1.0664979662906613 1.0727211362683162 0.9567450556305922 0.995216937855087 1.0189440664188218 0.9585560049585571 1.0 23.120389412796452 MNGVMFPGNS(ph)PSYTER ddPTM_KYSE-520_SHP099_60min_R1 9 MNGVMFPGNSPSYTER 16 0 Q9NY27-2;Q9NY27-3;Q9NY27 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 1 MNGVMFPGNS(0.987)PS(0.013)YTER;MNGVMFPGNS(0.943)PS(0.054)Y(0.004)TER;MNGVMFPGNS(1)PSYTER;MNGVMFPGNS(0.975)PS(0.025)YTER;MNGVMFPGNS(0.997)PS(0.003)YTER;MNGVMFPGNS(1)PSYTER;MNGVMFPGNS(0.983)PS(0.015)Y(0.001)TER;MNGVMFPGNS(0.994)PS(0.006)YTER;MNGVMFPGNS(0.999)PS(0.001)YTER 326.38 1.0191000000000001e-47 15045390000.0 14470540.0 13305200.0 11799220.0 11039170.0 11294620.0 12958670.0 11756170.0 12004470.0 13840390.0 12566430.0 True False 13667830.299893683 12665998.220487643 12559816.600619508 12088329.397752512 12183442.336402956 12877790.133755442 12944598.392762523 11962829.295434352 11327324.0638393 12455101.206734603 1.0973680641393218 1.0169325812976138 1.008407430188386 0.9705524826419095 0.9781889471773414 1.033937012634814 1.0393009400648823 0.960476281715473 0.9094525910166428 1.0 23.570233408781927 -3.9011920128326225 1.2418019062430814 0.9872021450496069 1.2441833300010456 0.47365816113185544 0.03525684911830429 3.123038311154857 2.28824477681154 0.01130667579146551 1.2716062876701715 0.00012554747630775845 3.9011920128326225 0.25698118495143873 MNIAS(ph)PGTVHK ddPTM_KYSE-520_SHP099_60min_R1 2 MNIASPGTVHK 11 0 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 MNIAS(1)PGTVHK;MNIAS(0.999)PGT(0.001)VHK 138.01 6.9035e-05 3832500000.0 4677300.0 4012300.0 3330100.0 3911200.0 4120200.0 4347400.0 4053300.0 4228600.0 4757000.0 4177600.0 True False 4417840.845033609 3819543.085414921 3544763.574348392 4282919.2720548455 4444436.29926881 4320266.264013851 4463047.120395875 4213931.973562661 3893248.714211341 4140589.7141236174 1.066959334310348 0.922463549669362 0.8561011399552936 1.0343742239048075 1.0733824421455638 1.0433939516579858 1.077877169325024 1.0177129985105435 0.9402643060555862 1.0 21.98140482425983 -5.3817388935066095 23.924554008217516 1.0322271190154455 0.9457738321395596 0.2547636249524958 0.06073223684296796 15.039805529674368 2935.9532022576705 0.017563903789983997 0.026051501729561145 4.152035962812104e-06 5.3817388935066095 -0.08645328687588594 MNIASPGT(ph)VHK ddPTM_KYSE-520_SHP099_60min_R1 1 MNIASPGTVHK 11 0 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 MNIAS(0.357)PGT(0.643)VHK 159.58 0.00010459 907930000.0 1550800.0 1522600.0 1295200.0 1400800.0 1460400.0 1586500.0 1498700.0 1547800.0 1653600.0 1590600.0 True False 1464774.0325568432 1449452.0105308075 1378690.6643932713 1533931.6108341233 1575325.1714606509 1576598.065017705 1650203.221902473 1542431.0430592361 1353347.9238637546 1576508.5214680755 0.9291253504883165 0.9194063912709141 0.8745215427756824 0.972992908027986 0.9992493855939817 1.0000567986461286 1.0467455135388495 0.9783842091908861 0.8584463105873291 1.0 20.588301537535404 -5.380216298149247 6.093534388038499 0.983812159909964 0.909224466374268 0.3261918419674805 0.04712115124045437 0.28002278223299437 12.888806733549988 0.013946167037852978 0.020803041920882538 4.166618154957672e-06 5.380216298149247 -0.07458769353569594 MNLASEPQEVLHIGS(ph)AHNR ddPTM_KYSE-520_SHP099_60min_R1 2 MNLASEPQEVLHIGSAHNR 19 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 MNLASEPQEVLHIGS(1)AHNR;MNLASEPQEVLHIGS(1)AHNR 171.52 4.563399999999999e-09 1117190000.0 308180.0 641140.0 436210.0 384770.0 459490.0 415080.0 424900.0 415690.0 636530.0 418460.0 True False 291084.6410584008 610338.6720292402 464328.79456067685 421338.4251146808 495649.2488595277 412489.33175389137 467853.0386243825 414248.06841277576 520952.1976155027 414752.76995695324 0.7018268764994919 1.4715722624169252 1.1195315093588623 1.0158785079564654 1.1950474710776993 0.9945426809245981 1.1280287258188546 0.9987831267667486 1.2560547761249956 1.0 18.661892090795323 -6.255174386947266 24.377662734987073 1.0786899894000885 1.1176973245284632 0.0003122782192988005 0.1918540478442309 2891.5730775871034 11251428.280976238 0.06106304135014097 0.05956546509267363 5.55681083848065e-07 6.255174386947266 0.03900733512837462 MNLRSVFT(ph)VEQQRILQRY(ph)YENGMT(ph)NQSK ddPTM_KYSE-520_SHP099_60min_R1 2 MNLRSVFTVEQQRILQRYYENGMTNQSK 28 3 Q7Z353 Q7Z353 HDX Highly divergent homeobox 3 MNLRS(0.397)VFT(0.838)VEQQRILQRY(0.385)Y(0.385)ENGMT(0.928)NQS(0.068)K;MNLRS(0.401)VFT(0.831)VEQQRILQRY(0.385)Y(0.385)ENGMT(0.942)NQS(0.056)K 40.671 0.058533 2686830000.0 388820.0 481290.0 469320.0 736480.0 454910.0 407100.0 432340.0 460390.0 520660.0 395140.0 True False 367251.37950654613 458168.1059689816 499573.11813855084 806474.8377692134 490708.82891616336 404559.13789392274 476045.1464317848 458793.01454583416 426121.2687705019 391639.3670142686 0.9377284574488807 1.1698724504176035 1.275594744080847 2.0592282229376373 1.2529609386747 1.0329889484250532 1.2155191396130538 1.1714680728945182 1.0880450349491475 1.0 18.579166264255104 -6.00047907494278 24.999999999961208 1.1220555513245187 1.3803079217569638 0.1640235076893073 0.27335351963531357 35.58922039426228 1857361.7754366528 0.09147782806213202 0.10257444396794363 9.988974973814105e-07 6.00047907494278 0.2582523704324451 MNLRSVFT(ph)VEQQRILQRYY(ph)ENGMT(ph)NQSK ddPTM_KYSE-520_SHP099_60min_R1 1 MNLRSVFTVEQQRILQRYYENGMTNQSK 28 3 Q7Z353 Q7Z353 HDX Highly divergent homeobox 3 MNLRS(0.237)VFT(0.827)VEQQRILQRY(0.44)Y(0.497)ENGMT(0.908)NQS(0.091)K 46.608000000000004 0.045607 1524600000.0 246230.0 317540.0 238390.0 431140.0 271340.0 235130.0 303150.0 287540.0 351280.0 224940.0 True False 232571.131052664 302284.90176274284 253757.000837486 472115.4159730321 292692.9142865879 233662.46645295504 333795.36045888794 286542.59085234086 287496.4070481737 222947.20660067158 1.043166831281408 1.355858664352659 1.1381932283726655 2.1176108154548636 1.3128350821225596 1.0480618708601985 1.497194629833422 1.2852486255437914 1.2895268410477034 1.0 17.76634259806887 -8.602535975904537 0.7543805812551828 0.9946969956309542 1.3721147367416229 0.11477423907012763 0.29088292224982093 4.8706070019744905 4.165920590426693 0.3477998008651766 0.10608194562531637 2.497261513481586e-09 8.602535975904537 0.3774177411106687 MNS(ph)LTFK ddPTM_KYSE-520_SHP099_60min_R1 5 MNSLTFK 7 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 MNS(0.937)LT(0.063)FK;MNS(0.999)LT(0.001)FK;MNS(1)LTFK;MNS(0.999)LT(0.001)FK;MNS(1)LTFK 152.54 0.0012696 7980820000.0 18121400.0 15659500.0 13731600.0 15755700.0 16772200.0 16327000.0 16122700.0 18018500.0 18066800.0 17211300.0 True False 17116169.817884702 14907194.1146113 14616760.907336833 17253116.990876056 18092076.719236054 16225097.136806866 17752539.85838864 17955998.029049497 14786324.546965213 17058821.272188783 1.0033618117442509 0.8738701154525074 0.8568447182905145 1.0113897505335867 1.0605701549105155 0.951126509734811 1.040666267330606 1.0525931271888869 0.8667846571012237 1.0 24.024014627191395 -5.278114686968361 24.59075266132479 1.002264483325501 0.9076100050054797 0.2716264817866535 0.06430349975853794 755.1683210175776 1113630.2567582217 0.017835496647234612 0.026539478732309957 5.270906507863057e-06 5.278114686968361 -0.09465447832002127 MNS(ph)LTFKK ddPTM_KYSE-520_SHP099_60min_R1 2 MNSLTFKK 8 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 MNS(0.987)LT(0.013)FKK;MNS(0.5)LT(0.5)FKK 150.46 0.00043384 6739700000.0 7437100.0 7571200.0 6514500.0 6401000.0 7177400.0 6405600.0 5707500.0 6391600.0 8420600.0 6754300.0 True False 7024549.237508708 7207468.187397115 6934435.093568531 7009349.115469168 7742220.546180274 6365620.274363331 6284469.799832108 6369429.031410653 6891631.30605173 6694462.156765891 1.0493074832619984 1.076631403482167 1.0358464849278604 1.0470369316204184 1.156511212533399 0.9508785209771916 0.9387564904643735 0.9514474624332984 1.0294525750790249 1.0 22.674536721223866 -6.290356230772642 24.99980692063817 0.9688630568551974 1.0697508667386202 0.6054070094944403 0.03978921784045376 493.33352510589924 426505.43589637656 0.014103530337697743 0.012440001710899188 5.124408810690218e-07 6.290356230772642 0.10088780988342283 MNS(ph)PGLQTK ddPTM_KYSE-520_SHP099_60min_R1 1 MNSPGLQTK 9 0 O14578-4;H7BYJ3;O14578;O14578-3 O14578-4 CIT Citron Rho-interacting kinase 1 MNS(1)PGLQTK 125.54 0.00066348 428050000.0 589200.0 636330.0 513800.0 490030.0 550670.0 665440.0 670910.0 776030.0 909600.0 695610.0 True False 556515.9014589201 605759.7516491967 546920.3701090668 536602.3038671084 594004.5961162945 661286.7421275646 738732.13025061 773338.1330567633 744439.5691500192 689447.436576391 0.8071911967972891 0.8786162940241469 0.7932734840888307 0.7783077801140722 0.8615661827186715 0.9591546897488448 1.071484338122937 1.1216781614229372 1.0797626180854398 1.0 19.39508103940123 -6.451770581187709 2.001788886303949 1.0805748204844083 0.8181172427626319 0.8986745073815414 0.03882769902248302 0.0949514404822636 0.7563377209480808 0.017102480189341785 0.013757682636468531 3.53369790327004e-07 6.451770581187709 -0.26245757772177647 MNS(ph)TGGQTPR ddPTM_KYSE-520_SHP099_60min_R1 3 MNSTGGQTPR 10 0 Q96ST2;Q96ST2-3;Q96ST2-2;A0A1B0GW95 Q96ST2 IWS1 Protein IWS1 homolog 1 MNS(0.958)T(0.042)GGQTPR;MNS(0.873)T(0.127)GGQTPR;MNS(0.915)T(0.085)GGQTPR 208.0 6.2092000000000004e-09 1746590000.0 1528150.0 1500840.0 1443030.0 1374070.0 1490020.0 2003040.0 1862970.0 2295330.0 2477300.0 2171540.0 True False 1443380.4732084977 1428737.393593231 1536050.0227296334 1504661.1996707895 1607276.0969459014 1990538.2843700394 2051297.1884350765 2287368.0359640517 2027484.767650992 2152301.845032553 0.6706217701479816 0.6638183193917309 0.7136777893281047 0.6990939505736621 0.7467707657526965 0.924841601081252 0.9530713329867777 1.0627542977966715 0.9420076335158866 1.0 21.03744898913058 -6.290699039716221 1.6258634950490787 1.0002962500857542 0.6822400112947926 0.9511629073191427 0.032008358649796745 0.07126736638575537 0.37394734728612794 0.01350312270057168 0.012011442535112025 5.120365471190449e-07 6.290699039716221 -0.31805623879096157 MNS(ph)YPYLADR ddPTM_KYSE-520_SHP099_60min_R1 3 MNSYPYLADR 10 0 G3V1T9;J3KPD3;Q9Y580 G3V1T9 RBM7 RNA-binding protein 7 1 MNS(1)YPYLADR;MNS(1)YPYLADR;MNS(1)YPYLADR 126.09 0.00042599 573630000.0 434590.0 563890.0 520000.0 539940.0 578330.0 760230.0 753430.0 1019640.0 1078880.0 797640.0 True False 410482.42636631324 536799.8779838542 553520.0320294172 591255.7352611201 623841.2807524226 755485.1225769998 829594.0571682001 1016103.1068257642 882982.5883515526 790573.5301545295 0.5192210600398907 0.6790005704832143 0.7001499682404284 0.7478820283112063 0.7890996307838481 0.9556165160618632 1.049357239428499 1.2852733718862956 1.1168886316987623 1.0 19.592540126338474 -6.259956173894856 1.005641135285643 1.157786419252105 0.633142032145115 0.8605191365673882 0.08331075754890763 0.17805234513487656 0.3804558774835777 0.047480091274210184 0.04322122713796891 5.495963326589071e-07 6.259956173894856 -0.52464438710699 MNST(ph)GGQTPR ddPTM_KYSE-520_SHP099_60min_R1 1 MNSTGGQTPR 10 0 Q96ST2;Q96ST2-3;Q96ST2-2;A0A1B0GW95 Q96ST2 IWS1 Protein IWS1 homolog 1 MNS(0.496)T(0.504)GGQTPR 88.163 0.044773 387700000.0 596830.0 598060.0 598090.0 534650.0 579760.0 744100.0 713960.0 839750.0 940950.0 809480.0 True False 563722.6501488911 569328.299893638 636643.8383778348 585462.9752516166 625383.8136168348 739455.7958901193 786134.0443781221 836837.1032491239 770097.1994192053 802308.636965911 0.7026256781688404 0.7096125775819462 0.7935148757533379 0.7297228875232613 0.7794803455959886 0.9216600218670433 0.9798399370983262 1.0430363886069944 0.9598515632730571 1.0 19.61379780259428 -6.342471425581082 1.8039678707560662 1.002492880737929 0.7339657898720539 0.9431382641901983 0.029826925039756823 0.07698217424171573 0.4949135268163686 0.013034104284531167 0.011235192511214622 4.5449443970154847e-07 6.342471425581082 -0.2685270908658751 MNYMQNHQAGAPAPS(ph)LSR ddPTM_KYSE-520_SHP099_60min_R1 1 MNYMQNHQAGAPAPSLSR 18 0 H0YJG4;Q9HCK8-2;Q9HCK8;A0A2R8Y840 H0YJG4 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 MNYMQNHQAGAPAPS(0.5)LS(0.5)R 72.145 0.0092671 1024800000.0 201090.0 255270.0 182410.0 170100.0 180360.0 149620.0 166530.0 220360.0 207370.0 179850.0 True False 189935.13683702354 243006.4460319184 194168.44046631912 186266.25285757036 194553.30589197655 148686.166081279 183364.4775761787 219595.62259241083 169716.83537229497 178256.66892118249 1.0655149004327282 1.3632390165406125 1.0892632609003376 1.0449328711506967 1.091422312945833 0.8341127823218871 1.0286542359728188 1.2319069122149178 0.952092487756161 1.0 17.443596526082366 -4.985062665346799 24.14951874870236 1.0334483410599749 1.2173456622943633 0.2903794224894205 0.11606521709012929 192.9068408720428 311870.22344575095 0.03014732695230726 0.06271333665740363 1.0349928144175815e-05 4.985062665346799 0.1838973212343884 MNYMQNHQAGAPAPSLS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 MNYMQNHQAGAPAPSLSR 18 0 H0YJG4;Q9HCK8-2;Q9HCK8;A0A2R8Y840 H0YJG4 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 MNYMQNHQAGAPAPS(0.402)LS(0.598)R 104.18 0.00030142 1118100000.0 542640.0 518150.0 444140.0 479790.0 449200.0 447850.0 458930.0 411860.0 469100.0 468170.0 True False 512538.67747397785 493257.2962409944 472769.9750491255 525389.0973458762 484549.4844016189 445054.80202847783 505323.12312517734 410431.3537888467 383923.265048674 464022.37803074875 1.1045559476013334 1.0630032506930267 1.018851670592915 1.1322494823968616 1.0442373198852706 0.9591235748526464 1.089005933872637 0.8845076729503102 0.8273809264932328 1.0 18.82383485715063 -7.2669647450051365 24.928410564129553 0.8919582085969381 1.0557902640749075 0.5796099637977359 0.06010038171896067 300.06252480645884 1353759.935025558 0.031252881566518405 0.015676241510297867 5.407982218793463e-08 7.2669647450051365 0.16383205547796942 MPARAS(ph)PPHSK ddPTM_KYSE-520_SHP099_60min_R1 2 MPARASPPHSK 11 1 A0A3B3IRR3;Q9HCM7 A0A3B3IRR3 FBRSL1 Fibrosin-1-like protein 1 MPARAS(0.999)PPHS(0.001)K;MPARAS(0.997)PPHS(0.003)K 63.062 0.022298 1952540000.0 2134340.0 1750800.0 1694240.0 1324470.0 1339960.0 1436190.0 1370660.0 1308300.0 1923420.0 1555450.0 True False 2015943.905498694 1666688.9399956237 1803453.4212798446 1450347.2305835756 1445407.2286705112 1427226.2054823688 1509219.6891524969 1303761.8126595144 1574175.413472439 1541669.9231217883 1.3076365279388271 1.0810932450577224 1.169805153640126 0.9407637840185078 0.937559465221744 0.9257663940101537 0.9789512440486731 0.8456815516122126 1.021084597852716 1.0 20.55606248162658 -4.478109558863175 0.8288936321998825 0.9369898734514812 1.407009575495002 0.7319461921507149 0.06616731862705037 0.8898523232634113 0.5917423154708877 0.02418173481151359 0.36202444887332336 3.3257564431674966e-05 4.478109558863175 0.47001970204352084 MPCQSLQPEPINT(ph)PTHTK ddPTM_KYSE-520_SHP099_60min_R1 2 MPCQSLQPEPINTPTHTK 18 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MPCQSLQPEPINT(0.985)PT(0.014)HT(0.001)K;MPCQSLQPEPINT(0.967)PT(0.032)HT(0.001)K 118.35 9.6181e-05 1762560000.0 432240.0 521740.0 433240.0 337420.0 381680.0 445260.0 390740.0 533050.0 594130.0 497710.0 True False 408262.78555092175 496674.8272522934 461167.3436085089 369488.2953509775 411716.04453786643 442480.96717918967 430239.8124549091 531200.9739648054 486250.968798484 493300.6766125209 0.8276144852556224 1.006839947317613 0.9348605535579831 0.7490123425093215 0.8346147979465721 0.8969802559722633 0.8721654618626339 1.0768300129092556 0.9857091057274704 1.0 18.912107740574932 -7.249178634978908 24.590412960411722 1.0234521677742765 0.8764835083863538 0.49354333109553805 0.06786254662886615 522.2209114121714 1047380.5783204488 0.03440969490126517 0.01966558214064929 5.6340586679634086e-08 7.249178634978908 -0.1469686593879227 MPEMHFK ddPTM_KYSE-520_SHP099_60min_R1 2 MPEMHFK 7 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 97.602 0.0097567 1605790000.0 3503900.0 2965400.0 2162800.0 2238200.0 3758200.0 3235900.0 2731100.0 3052900.0 2701100.0 2996500.0 False True 3309531.68214852 2822937.7328438535 2302217.5486023505 2450917.855060632 4053948.9587670583 3215703.547803839 3007186.240967406 3042310.2024522135 2210648.329189882 2969953.341241722 1.1143379379707097 0.9504990174908263 0.7751696017014885 0.825237831526308 1.364987423362053 1.082745477226713 1.01253652682305 1.0243629622747674 0.744337730324619 1.0 21.50200883540478 -3.1745043386163156 14.5665358416392 0.9921717324834847 41.94917875945086 0.0 0.17370871195932946 0.0 0.0 0.04162469075635519 0.0 0.0006691071356099361 3.1745043386163156 40.957007026967375 MPFLSISS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 MPFLSISSPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPFLSIS(0.02)S(0.98)PK;MPFLSIS(0.048)S(0.951)PK;MPFLSIS(0.006)S(0.994)PK;MPFLSISS(1)PK 205.97 3.3062e-07 13074770000.0 4351850.0 3785710.0 3625860.0 3353480.0 3166350.0 3890140.0 3713910.0 3992370.0 4352820.0 3768260.0 True False 4110444.205302104 3603838.809133441 3859588.737181123 3672193.730939477 3415523.7309329147 3865860.193285838 4089348.2670686673 3978521.4002961614 3562457.61366269 3734876.148061921 1.1005570311709185 0.9649152117141885 1.0333913586890737 0.9832170024821384 0.9144945094645983 1.0350705190831793 1.094908667638333 1.0652351624459278 0.9538355416447474 1.0 21.832628972033614 -6.479944500953039 24.992541305225036 1.0383681587872076 0.9960406985185557 0.05544654644626279 0.05712994281633707 1095.9639211138867 637973.6083188693 0.020229747573684845 0.017839798598261708 3.3117343985576183e-07 6.479944500953039 -0.04232746026865186 MPFQTS(ph)PGGK ddPTM_KYSE-520_SHP099_60min_R1 1 MPFQTSPGGK 10 0 I6LM39;A0A087X1U4;P51608;P51608-2 I6LM39 MECP2 Methyl-CpG-binding protein 2 1 MPFQT(0.083)S(0.917)PGGK 90.434 0.005093199999999999 0.0 774200.0 695200.0 628360.0 498240.0 548620.0 623840.0 689340.0 614750.0 634680.0 823170.0 True False 731253.5826705622 661801.5484835254 668865.0910115482 545592.5797986818 591793.2727791991 619946.3831583011 759025.2145100763 612617.5757337284 519438.1109807977 815877.35421657 0.8962788081950551 0.8111532267236503 0.8198108300895453 0.6687188668480402 0.725345874255153 0.7598524213894774 0.9303177868429933 0.7508696896263068 0.6366620035428949 1.0 19.637992771533025 -10.041325896708297 5.025943093660093 1.0000033687788816 0.7783263887731907 0.36983568643300224 0.08706171266525879 3.4145319810354068e-06 6.515338793617191e-07 0.08758448814512128 0.021242035743642522 9.092307253771584e-11 10.041325896708297 -0.22167698000569092 MPGGPKPGGGPGLS(ph)TPGGHPKPPHR ddPTM_KYSE-520_SHP099_60min_R1 1 MPGGPKPGGGPGLSTPGGHPKPPHR 25 2 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 MPGGPKPGGGPGLS(0.649)T(0.351)PGGHPKPPHR 115.66 0.0001862 789430000.0 578210.0 712440.0 963410.0 2961300.0 559650.0 562690.0 790920.0 725140.0 790540.0 638210.0 True False 546135.5386669412 678213.3130057575 1025512.9501105006 3242741.0616526874 603691.2710270829 559178.0429907418 870873.91223534 722624.6585889491 646997.8638916615 632555.9559198659 0.8633790158101481 1.0721791592642527 1.6212209220592901 5.126409816088251 0.9543681715069653 0.8839977519104731 1.3767539520972671 1.1423885141324848 1.0228310362690272 1.0 19.27083358073771 MPGGPKPGGGPGLST(ph)PGGHPKPPHR ddPTM_KYSE-520_SHP099_60min_R1 1 MPGGPKPGGGPGLSTPGGHPKPPHR 25 2 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 MPGGPKPGGGPGLS(0.276)T(0.724)PGGHPKPPHR 97.469 0.0060849 653090000.0 469600.0 712620.0 992060.0 2704400.0 481210.0 466560.0 774440.0 497800.0 666280.0 563740.0 True False 443550.3518756088 678384.6655355735 1056009.7749521213 2961425.362892493 519078.4892896326 463648.02597835497 852727.9530060396 496073.2479873929 545300.3475519728 558745.702183084 0.7938322391431493 1.2141205970534472 1.8899649175397129 5.300130902702002 0.9290066791771874 0.8298015074958583 1.5261467778174096 0.8878336711122384 0.9759365404000808 1.0 19.091832303707267 MPIEDS(ph)SPEK ddPTM_KYSE-520_SHP099_60min_R1 1 MPIEDSSPEK 10 0 A0A088AWL3;O75376-2;O75376 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 MPIEDS(0.657)S(0.343)PEK 69.979 0.04187 0.0 548600.0 419290.0 374720.0 449650.0 439180.0 489910.0 449170.0 525860.0 505340.0 461490.0 True False 518168.06439301354 399146.67903287866 398875.05077319854 492384.60080779815 473740.96740761935 486852.2899671123 494576.4870767562 524035.91439664725 413582.9945847303 457401.55763378734 1.1328515518696116 0.8726395272847984 0.8720456765312389 1.076482125148379 1.0357222434010904 1.0643870398817143 1.0812741645115527 1.1456802139187507 0.9042011066255707 1.0 18.803101753143796 -5.282396155672488 24.60732617620066 1.052096018748764 0.9505249667083068 0.15152744677697905 0.0898210721272115 978.9662652949617 1149494.317655551 0.024760171664249733 0.036772502328937376 5.219198857930564e-06 5.282396155672488 -0.10157105204045724 MPIEDS(ph)SPEKGR ddPTM_KYSE-520_SHP099_60min_R1 2 MPIEDSSPEKGR 12 1 A0A088AWL3;O75376-2;O75376 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 MPIEDS(0.651)S(0.349)PEKGR;MPIEDS(0.5)S(0.5)PEKGR 96.059 0.003089 1147700000.0 1014170.0 939860.0 856110.0 774440.0 860260.0 884550.0 870330.0 827560.0 905800.0 860100.0 True False 957911.9684022275 894707.7148413798 911296.2204244323 848042.5447561232 927957.5677901522 879029.1953428364 958311.4500022558 824689.3875139559 741329.5533598133 852480.183147675 1.123676523324283 1.0495349129850562 1.068994022898675 0.9947944380652154 1.0885385797049105 1.031143260242288 1.1241451343347506 0.9674000684319662 0.8696149987000846 1.0 19.70130677190867 -7.444253675065353 5.806545307392106 0.9294131315256157 1.0639757540396597 0.5886963002611234 0.047440412533119425 0.13815485099312724 7.823978052774561 0.025497467794579582 0.011774572476181402 3.595392638967378e-08 7.444253675065353 0.13456262251404405 MPIEDSS(ph)PEKGREEAASK ddPTM_KYSE-520_SHP099_60min_R1 2 MPIEDSSPEKGREEAASK 18 2 A0A088AWL3;O75376-2;O75376 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 MPIEDS(0.234)S(0.766)PEKGREEAASK;MPIEDS(0.159)S(0.841)PEKGREEAASK 165.13 1.4805e-08 418680000.0 589140.0 627210.0 613920.0 458869.0 522270.0 512977.0 434464.0 467111.0 769180.0 493049.0 True False 556459.2297785267 597077.8901385968 653494.2655067303 502479.7717960039 563369.6776901896 509775.320263844 478383.86108002707 465490.7009655274 629516.3014498808 488680.9694463174 1.1386963368125487 1.2218153099251945 1.337261539460292 1.0282368318236759 1.1528373579361921 1.0431658937761108 0.9789287715092382 0.9525451778753223 1.2881948363226254 1.0 18.89853339768314 -5.2774706744593285 24.830617895988926 1.0608001523682118 1.2315134919683868 0.3670344034733284 0.10176492010740981 761.2784195813224 1179130.0557633133 0.028558992702593634 0.04250730524507702 5.27872849956294e-06 5.2774706744593285 0.17071333960017498 MPLDLS(ph)PLATPIIR ddPTM_KYSE-520_SHP099_60min_R1 7 MPLDLSPLATPIIR 14 0 C9JCI8;E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336-3;P15336-7;P15336-4;P15336-5;P15336 C9JCI8 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 MPLDLS(1)PLATPIIR;MPLDLS(1)PLATPIIR;MPLDLS(1)PLATPIIR;MPLDLS(1)PLATPIIR;MPLDLS(1)PLATPIIR;MPLDLS(1)PLATPIIR;MPLDLS(1)PLATPIIR 293.75 6.8286e-33 3372339000.0 1755760.0 1904080.0 1481540.0 1280950.0 1391146.0 2027010.0 1454444.0 1898650.0 1987230.0 2034480.0 True False 1658364.4927792125 1812605.138717652 1577042.4389478145 1402691.1028683393 1500621.2756620068 2014358.6787088201 1601473.3935255364 1892064.0262982436 1626399.1259916364 2016456.0900014904 0.8224153756692946 0.8989063276435205 0.7820861791970134 0.6956219427854253 0.7441874301666036 0.9989598527321918 0.7942019672366646 0.938311543544122 0.8065631253048681 1.0 20.943390559532716 -6.240725977855914 24.91538135793524 0.8966639497565698 0.7892370113916475 0.3469476645682338 0.08091136159142634 1034.7679785811279 1244684.7405185094 0.02708340574501918 0.02705382064498468 5.744788206354967e-07 6.240725977855914 -0.10742693836492234 MPLLELGGET(ph)TPPLS(ph)TERSPEAVGSECPSR ddPTM_KYSE-520_SHP099_60min_R1 1 MPLLELGGETTPPLSTERSPEAVGSECPSR 30 1 A0A0J9YWL0;Q9Y4K1 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 2 MPLLELGGET(0.5)T(0.5)PPLS(0.445)T(0.391)ERS(0.164)PEAVGSECPSR 132.34 2.5689e-05 448200000.0 153980.0 154630.0 121460.0 108610.0 138200.0 116390.0 104980.0 134000.0 173640.0 148360.0 True False 145438.42244847998 147201.34269563822 129289.5059428712 118932.26174521267 149075.55374956288 115663.56683732175 115592.40290606632 133535.18527583507 142111.35310818953 147045.64582233343 0.9890699016290807 1.0010588336188675 0.8792474283739354 0.80881185621036 1.0138046109143692 0.7865827389208873 0.7860987808216354 0.908120635120184 0.9664438026263918 1.0 17.165904539562636 -4.761841706296272 24.999778004572324 0.8839552840267364 0.9950644022944414 0.20082783701652263 0.0790654285539174 14.360571051880898 892608.1599679405 0.020517316291823184 0.047431976728778955 1.7304469657670457e-05 4.761841706296272 0.11110911826770498 MPLLELGGET(ph)TPPLSTER ddPTM_KYSE-520_SHP099_60min_R1 4 MPLLELGGETTPPLSTER 18 0 A0A0J9YWL0;Q9Y4K1 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 MPLLELGGET(0.498)T(0.498)PPLS(0.002)T(0.002)ER;MPLLELGGET(0.586)T(0.41)PPLS(0.004)TER;MPLLELGGET(0.499)T(0.499)PPLS(0.001)T(0.001)ER;MPLLELGGET(0.766)T(0.234)PPLSTER 195.38 9.0272e-12 303834000.0 293297.0 395415.0 277639.0 231891.0 273082.0 356551.0 269854.0 382483.0 410845.0 392745.0 True False 277027.23073692556 376418.6698699844 295536.05417810654 253929.85091942866 294571.9997759634 354325.6329531218 297133.4758412428 381156.2557452037 336245.90455962974 389265.58485098626 0.7116663828449505 0.9669970439695568 0.7592144429907409 0.652330595874883 0.7567378449053691 0.9102413538272598 0.7633181236789471 0.9791676186609539 0.8637956131887363 1.0 18.57039527542932 -7.347587725508232 0.888699451671553 0.9781830433220366 0.7804902260028589 0.3606826054336041 0.09375514820373607 0.682429249365377 0.9871158164504776 0.08745943016154466 0.03585072789074606 4.4917158489078275e-08 7.347587725508232 -0.19769281731917776 MPLLELGGET(ph)TPPLSTERS(ph)PEAVGSECPSR ddPTM_KYSE-520_SHP099_60min_R1 3 MPLLELGGETTPPLSTERSPEAVGSECPSR 30 1 A0A0J9YWL0;Q9Y4K1 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 2 MPLLELGGET(0.505)T(0.425)PPLS(0.075)T(0.075)ERS(0.912)PEAVGS(0.009)ECPSR;MPLLELGGET(0.5)T(0.5)PPLS(0.053)T(0.046)ERS(0.9)PEAVGSECPSR;MPLLELGGET(0.5)T(0.5)PPLS(0.118)T(0.071)ERS(0.811)PEAVGSECPSR 171.2 2.6721e-10 1071071000.0 463608.0 439873.0 403080.0 405512.0 418582.0 437676.0 368986.0 430961.0 566445.0 436543.0 True False 437890.7400603647 418740.8408171658 429063.181750803 444051.73855837196 451522.021994208 434944.3017363306 406286.70583632914 429466.0968780531 463592.8669164277 432675.56864531426 1.0120533068954618 0.9677940497731883 0.9916510495246555 1.0262926098385354 1.0435579328130336 1.0052434971036606 0.9390100465075777 0.9925822671769754 1.0714560758951885 1.0 18.722926134624966 -5.027112508724942 22.368009358366173 1.0089524970876806 0.9873734085975917 0.06810156534535394 0.03413384895441765 567.575003379113 468256.6887997361 0.009864104805523334 0.017178710067120715 9.394798965168395e-06 5.027112508724942 -0.021579088490088938 MPLLELGGETT(ph)PPLS(ph)TERSPEAVGSECPSR ddPTM_KYSE-520_SHP099_60min_R1 1 MPLLELGGETTPPLSTERSPEAVGSECPSR 30 1 A0A0J9YWL0;Q9Y4K1 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 2 MPLLELGGET(0.166)T(0.833)PPLS(0.416)T(0.372)ERS(0.213)PEAVGSECPSR 86.697 0.0036225000000000003 295920000.0 168730.0 169780.0 164830.0 158490.0 146640.0 160240.0 136940.0 165480.0 195410.0 168320.0 True False 159370.21054508415 161623.51395502454 175455.20553732468 173552.84194824382 158179.73373253216 159239.8827219899 150783.23160560802 164905.98850332235 159928.46988522992 166828.81575097833 0.9552918650634823 0.968798544948472 1.0517080322575854 1.0403049447243111 0.9481559466839562 0.9545106581568243 0.9038200680551421 0.9884742498530581 0.9586381655070404 1.0 17.348008976351927 -5.78388013318627 24.981906539433005 0.9553800986042033 1.004915489850716 0.26945076938977497 0.03607915159183003 309.0227606139591 344014.05259220593 0.011846100920390384 0.013441829168759202 1.6448256382672477e-06 5.78388013318627 0.04953539124651274 MPLLELGGETT(ph)PPLSTER ddPTM_KYSE-520_SHP099_60min_R1 6 MPLLELGGETTPPLSTER 18 0 A0A0J9YWL0;Q9Y4K1 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 MPLLELGGET(0.122)T(0.878)PPLSTER;MPLLELGGET(0.087)T(0.913)PPLSTER;MPLLELGGET(0.022)T(0.978)PPLSTER;MPLLELGGET(0.041)T(0.957)PPLS(0.001)T(0.001)ER;MPLLELGGET(0.233)T(0.766)PPLS(0.001)TER;MPLLELGGET(0.025)T(0.969)PPLS(0.003)T(0.003)ER 191.93 7.3932e-12 844237000.0 582881.0 743776.0 496942.0 490040.0 497240.0 680648.0 510081.0 684608.0 776326.0 716972.0 True False 550547.4289855335 708043.8845294638 528975.676455313 536613.2542641017 536369.9590914083 676399.8233584446 561644.9653908288 682233.2546367091 635364.7679858815 710620.1858757759 0.7747421758179203 0.996374573369124 0.7443859419830549 0.7551337056416063 0.7547913354450806 0.9518443703155467 0.7903588675836045 0.9600533001970913 0.8940989583666994 1.0 19.43871914488086 -7.2680981569646494 24.596412798965616 0.9453071080326501 0.8271316472444136 0.3221188614811158 0.08449144496956272 577.8462733888813 2134448.2484014053 0.04521870775325812 0.022539948486119572 5.393886989281178e-08 7.2680981569646494 -0.11817546078823649 MPLLELGGETT(ph)PPLSTERS(ph)PEAVGSECPSR ddPTM_KYSE-520_SHP099_60min_R1 4 MPLLELGGETTPPLSTERSPEAVGSECPSR 30 1 A0A0J9YWL0;Q9Y4K1 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 2 MPLLELGGET(0.145)T(0.855)PPLS(0.156)T(0.31)ERS(0.534)PEAVGSECPSR;MPLLELGGET(0.104)T(0.896)PPLS(0.004)T(0.08)ERS(0.917)PEAVGSECPSR;MPLLELGGET(0.099)T(0.901)PPLS(0.107)T(0.074)ERS(0.819)PEAVGSECPSR;MPLLELGGET(0.098)T(0.902)PPLS(0.007)T(0.284)ERS(0.709)PEAVGSECPSR 174.92 1.8424e-10 2398310000.0 978470.0 986600.0 916350.0 908280.0 973900.0 890470.0 793640.0 941900.0 1219170.0 937140.0 True False 924192.3185684141 939202.2550832095 975419.387211839 994602.6581156594 1050540.3892670006 884912.2464269246 873868.8763799834 938632.7687411136 997799.460774657 928837.6686838871 0.9949987492194893 1.0111586628630258 1.0501505484741545 1.0708035339748416 1.1310269002715616 0.9527092583150698 0.9408198072093786 1.0105455456722654 1.0742452577192363 1.0 19.825066955814997 -6.291882060623964 24.99037417961432 0.9928953169599302 1.050362704590871 0.25422314716120054 0.04778421880777067 1082.154978471277 888336.0647976384 0.01834591238272203 0.016182437338502324 5.106436543210244e-07 6.291882060623964 0.057467387630940836 MPLLELGGETTPPLSTERS(ph)PEAVGSECPSR ddPTM_KYSE-520_SHP099_60min_R1 13 MPLLELGGETTPPLSTERSPEAVGSECPSR 30 1 A0A0J9YWL0;Q9Y4K1 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 MPLLELGGETTPPLS(0.006)T(0.006)ERS(0.987)PEAVGSECPSR;MPLLELGGETTPPLS(0.002)T(0.002)ERS(0.997)PEAVGSECPSR;MPLLELGGETTPPLS(0.001)T(0.003)ERS(0.996)PEAVGSECPSR;MPLLELGGETTPPLS(0.002)T(0.011)ERS(0.986)PEAVGSECPSR;MPLLELGGETTPPLS(0.013)T(0.013)ERS(0.973)PEAVGSECPSR;MPLLELGGETTPPLS(0.008)T(0.005)ERS(0.987)PEAVGSECPSR;MPLLELGGETTPPLST(0.001)ERS(0.999)PEAVGSECPSR;MPLLELGGETTPPLSTERS(0.999)PEAVGSECPSR;MPLLELGGETTPPLS(0.001)T(0.001)ERS(0.998)PEAVGSECPSR;MPLLELGGETTPPLST(0.001)ERS(0.998)PEAVGSECPSR;MPLLELGGETTPPLS(0.001)T(0.004)ERS(0.995)PEAVGSECPSR;MPLLELGGETTPPLST(0.002)ERS(0.997)PEAVGSECPSR;MPLLELGGETTPPLS(0.05)T(0.05)ERS(0.901)PEAVGSECPSR 337.16 4.747899999999999e-79 14941280000.0 1294463.0 1316621.0 1048486.0 977810.0 904950.0 1225034.0 1017506.0 1320106.0 1539330.0 1287398.0 True False 1222656.5569419856 1253368.5508715883 1116073.0851969148 1070740.7684107039 976164.4165388342 1217388.108402709 1120365.4363815961 1315526.860401056 1259826.4753514712 1275992.6553004894 0.9582003092753356 0.9822694085777686 0.8746704619033138 0.8391433633750425 0.7650235387200977 0.954071407343658 0.8780343928529558 1.0309830976975776 0.987330507051225 1.0 20.283188594201206 -7.258119818491216 24.98644136059481 1.006867605538893 0.8911314138857411 0.4212998932531059 0.060683345056130183 300.6466406018473 2262995.46095685 0.03275207927245625 0.01794121376294079 5.519251463910401e-08 7.258119818491216 -0.11573619165315185 MPMFIVNTNVPR ddPTM_KYSE-520_SHP099_60min_R1 1 MPMFIVNTNVPR 12 0 P14174 P14174 MIF Macrophage migration inhibitory factor 0 133.23 0.00038704 314510000.0 61245.0 47327.0 32722.0 155690.0 81811.0 60685.0 45234.0 54681.0 58628.0 53425.0 False True 57847.61776111937 45053.33988072472 34831.31247705116 170486.73079009447 88249.06025908467 60306.242405042234 49806.694161297455 54491.32437364131 47982.633091608724 52951.69606402107 1.0924601487963466 0.850838466557391 0.6577940852912147 3.219665156409118 1.6665955355308628 1.138891610424134 0.9406062102539424 1.0290760905516372 0.9061585682467184 1.0 15.6923892746068 -6.442228573024738 4.620780164655281 0.978242198499229 1.5075313950852767 0.12828619515521478 0.6552638522950224 0.5455373859029035 20.918560795371263 0.26186547754207584 0.2255398053739371 3.61219699480917e-07 6.442228573024738 0.5292891965860477 MPNS(ph)PAPHFAMPPIHEDHLEK ddPTM_KYSE-520_SHP099_60min_R1 2 MPNSPAPHFAMPPIHEDHLEK 21 0 A0A0J9YWL0;Q9Y4K1 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 MPNS(1)PAPHFAMPPIHEDHLEK;MPNS(1)PAPHFAMPPIHEDHLEK 221.5 5.7904e-19 5014900000.0 1469370.0 1403880.0 1113740.0 1507450.0 1636310.0 2537500.0 2942100.0 3254100.0 3646300.0 3201200.0 True False 1387861.1169835243 1336435.4975331586 1185533.4624470077 1650717.594768631 1765078.287669662 2521662.5212621656 3239516.180128957 3242812.286612652 2984223.8357428648 3172839.8584959167 0.43741921397868444 0.4212111411657238 0.37365058285954883 0.5202650207348167 0.5563086592420698 0.7947651421832423 1.0210147138231704 1.0220535643894444 0.9405529332821527 1.0 21.597343275835268 -6.306411288385543 1.512270169242544 1.0066989804813362 0.4244266991281344 0.9751733117224556 0.04075365003734025 0.05612906874852628 0.2564233647654274 0.019133912238910922 0.016741908474166244 4.938427832579076e-07 6.306411288385543 -0.5822722813532017 down MPQDGS(ph)DDEDEEWPTLEK ddPTM_KYSE-520_SHP099_60min_R1 1 MPQDGSDDEDEEWPTLEK 18 0 F8WBL2;Q13895 F8WBL2 BYSL Bystin 1 MPQDGS(1)DDEDEEWPTLEK 69.979 0.011909000000000001 105910000.0 282230.0 265180.0 246820.0 388060.0 265010.0 300290.0 254720.0 292760.0 350930.0 295320.0 True False 266574.1392884438 252440.3547567052 262730.4121259632 424941.1057255063 285864.7792993611 298415.7787230806 280469.5834276362 291744.48389069765 287209.9582253914 292703.6945554833 0.910730353756821 0.8624433495452651 0.8975985510704289 1.4517790982134557 0.9766353640786525 1.0195149028654114 0.9582030860716448 0.9967229294244394 0.9812310659814698 1.0 18.159081430238942 -5.043878147478466 24.999403916471472 1.0558735653788425 0.8849440017653679 0.23328574291017756 0.13683739600023806 644.8906703886721 367423.2451612006 0.03818079120695547 0.06613656072729755 9.039030514682e-06 5.043878147478466 -0.17092956361347456 MPQPSSGRES(ph)PRH ddPTM_KYSE-520_SHP099_60min_R1 3 MPQPSSGRESPRH 13 2 P56181-2;P56181 P56181-2 NDUFV3 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial 1 MPQPS(0.008)S(0.008)GRES(0.984)PRH;MPQPS(0.013)S(0.057)GRES(0.93)PRH;MPQPS(0.06)S(0.044)GRES(0.895)PRH 53.255 0.052907 4449530000.0 1803460.0 2075890.0 1684710.0 2037920.0 1765300.0 1831330.0 1652930.0 1442220.0 2175880.0 1630140.0 True False 1703418.4786916194 1976161.1284255856 1793309.1022313086 2231603.3040770083 1904219.0668169593 1819899.9901726278 1820024.2954422215 1437217.2754366782 1780795.041471134 1615698.2278297301 1.0542924720414644 1.2231003874281916 1.1099282473312806 1.381200564337182 1.178573469981942 1.1263860780593846 1.1264630140041374 0.8895332375076039 1.1021829514928467 1.0 20.623726333089202 -6.914815483193381 2.2334064596039265 0.9976848866040747 1.1913373220155203 0.40814144898906324 0.09566040254516445 0.29319554027588496 2.9496201002510603 0.04985154468822402 0.02886117654559751 1.2167028260829318e-07 6.914815483193381 0.1936524354114456 MPS(ph)LEISAPK ddPTM_KYSE-520_SHP099_60min_R1 2 MPSLEISAPK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPS(1)LEISAPK;MPS(1)LEISAPK 142.08 0.00022736 1189340000.0 1368780.0 1339810.0 1094980.0 979380.0 1116830.0 1417110.0 1198650.0 1372680.0 1626100.0 1448280.0 True False 1292851.044804719 1275443.5165041892 1165564.1628299444 1072459.980738667 1204718.1671065437 1408265.2908397357 1319821.23969667 1367918.4934659211 1330841.2306451688 1435449.3659447911 0.9006594558309509 0.8885325715858403 0.8119855638814454 0.7471249116702838 0.8392620427357369 0.9810623239314586 0.919448133113343 0.9529548905861809 0.9271251652747983 1.0 20.45307101112757 -6.249568386785644 22.947367782662326 0.9508859067620441 0.8339075651544663 0.6319980880698406 0.04512225463020679 182.90287015017813 353562.05591428024 0.01624725752162426 0.016095660373120095 5.629004725080046e-07 6.249568386785644 -0.11697834160757781 MPS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 8 MPSPFR 6 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7 P28290-3 SSFA2 Sperm-specific antigen 2 1 MPS(1)PFR;MPS(1)PFR;MPS(1)PFR;MPS(1)PFR;MPS(1)PFR;MPS(1)PFR;MPS(1)PFR;MPS(1)PFR 98.29899999999999 0.012745999999999999 23166830000.0 4340850.0 3904000.0 3616140.0 3208870.0 3434730.0 3495950.0 3385770.0 3395450.0 3895180.0 3559840.0 True False 4100054.3972300594 3716445.9799765325 3849242.170428568 3513840.0400180523 3705023.7100595958 3474130.479293196 3728036.673530883 3383671.976453991 3187913.5014971094 3528302.5871136105 1.1620472723072712 1.053324052633716 1.0909614681255293 0.995900990139457 1.0500867254388617 0.9846464109914306 1.056609114860715 0.9590084446872974 0.9035261071826148 1.0 21.750542861004426 -1.0000000000000002 0.28521724533381626 0.9620749039257854 2.4188040869330245 0.6341309712336327 0.04180653674218319 34.154277137466146 0.48340093591064354 0.04515502203687722 24.9538416894504 0.09999999999999995 1.0000000000000002 1.456729183007239 MPS(ph)RT(ph)NLAT(ph)GIPS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 MPSRTNLATGIPSSK 15 1 Q5JWB9;A0A087WTT2;Q96A57 Q5JWB9 TMEM230 Transmembrane protein 230 4 MPS(1)RT(1)NLAT(0.934)GIPS(0.871)S(0.195)K 41.644 0.046744 729720000.0 916400.0 821310.0 912310.0 856610.0 863040.0 847630.0 821400.0 847790.0 1084100.0 825750.0 True False 865565.4652018908 781853.0347885564 971118.9623476104 938021.9568508131 930956.3379741159 842339.6267576171 904435.1280914738 844849.2143656736 887254.7679370432 818434.4974237778 1.0575867316522816 0.9553031271893224 1.186556731668135 1.1461173249703744 1.1374842347243768 1.0292083598737425 1.1050794302273474 1.0322746866426604 1.084087695142243 1.0 19.642507431119874 -8.305048660593325 0.695001597620161 1.000642376451896 1.0894027449439811 0.13548474549659595 0.06343447184756343 2.556004134350681 2.4635066244324326 0.07067358543560118 0.025908096291433654 4.953946811203253e-09 8.305048660593325 0.08876036849208524 MPSARPPS(ph)PPLSSWER ddPTM_KYSE-520_SHP099_60min_R1 8 MPSARPPSPPLSSWER 16 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 MPS(0.007)ARPPS(0.99)PPLS(0.002)S(0.001)WER;MPSARPPS(1)PPLSSWER;MPSARPPS(0.996)PPLS(0.002)S(0.002)WER;MPS(0.001)ARPPS(0.927)PPLS(0.052)S(0.019)WER;MPSARPPS(0.73)PPLS(0.136)S(0.133)WER;MPSARPPS(0.954)PPLS(0.019)S(0.026)WER;MPSARPPS(0.883)PPLS(0.097)S(0.021)WER;MPSARPPS(1)PPLSSWER 128.88 4.4423999999999993e-05 14826410000.0 2648850.0 2489880.0 2176220.0 1980900.0 1892340.0 2333860.0 2011220.0 2221420.0 2655030.0 2275230.0 True False 2501913.0101484377 2370262.427413929 2316502.6232751096 2169164.140420697 2041256.3920582337 2319293.514038589 2214533.7452156525 2213714.412503323 2172943.4798596897 2255073.232302157 1.1094597613551942 1.051080024125947 1.0272405304151655 0.9619040789226356 0.9051840813055804 1.0284781357946724 0.9820229842180696 0.9816596555684306 0.9635800065088693 1.0 21.10474285431864 -4.720916892588279 1.677211830527415 0.9743494665123213 1.1065566004508636 0.6598633110269523 0.03116762409869024 0.28631185549182653 1.3903439329027218 0.009348990167115642 0.04647006419126078 1.9014421086613066e-05 4.720916892588279 0.13220713393854222 MPT(ph)TPVK ddPTM_KYSE-520_SHP099_60min_R1 1 MPTTPVK 7 0 F8WDP1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-4;Q8WUA7;B0QYI1;Q8WUA7-2 F8WDP1 TBC1D22A TBC1 domain family member 22A 1 MPT(0.5)T(0.5)PVK 87.639 0.037948 1420200000.0 2968700.0 3631300.0 2867700.0 2223900.0 2402800.0 4009700.0 2558700.0 2814300.0 3794600.0 3581600.0 True False 2804020.2930432702 3456846.897307577 3052556.5304822302 2435258.7873600847 2591886.689938135 3984673.974977303 2817358.3665055493 2804537.85016256 3105596.2940816414 3549869.8104426353 0.7898938391471982 0.9737954014929187 0.859906614463026 0.6860135490592628 0.7301357030935597 1.1224845382373196 0.7936511807328087 0.790039635231823 0.8748479408867118 1.0 21.759334684850533 MPTFS(ph)TPGAK ddPTM_KYSE-520_SHP099_60min_R1 1 MPTFSTPGAK 10 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MPT(0.001)FS(0.732)T(0.267)PGAK 110.54 0.00067595 235640000.0 676250.0 819470.0 678470.0 504750.0 488490.0 672450.0 529160.0 705180.0 785630.0 763640.0 True False 638737.0644290467 780101.4311504537 722205.2617903824 552721.2882413793 526931.3838720983 668252.9901173383 582652.656903926 702733.8951702495 642979.3961206349 756874.7437029305 0.8439138308461615 1.030687623864801 0.9541938977340805 0.7302678452939891 0.6961936413601828 0.88291093827227 0.7698138453575011 0.9284678885335735 0.8495188952599018 1.0 19.529695040710568 -5.225638794987358 23.95679767927107 0.8270377271778646 0.9517074618496802 0.19949705593305556 0.09563154347610874 506.3010753942151 338801.73256284645 0.025821021984880534 0.04472048536591152 5.947866401432883e-06 5.225638794987358 0.12466973467181564 MPTT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 MPTTPVK 7 0 F8WDP1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-4;Q8WUA7;B0QYI1;Q8WUA7-2 F8WDP1 TBC1D22A TBC1 domain family member 22A 1 MPT(0.032)T(0.968)PVK;MPT(0.016)T(0.984)PVK 95.60799999999999 0.029345 1574910000.0 4825500.0 5868900.0 4460400.0 3394700.0 3656200.0 5987500.0 3741100.0 4468300.0 5948300.0 5810500.0 True False 4557819.895604238 5586949.2346014995 4747924.52089233 3717331.2673462327 3943922.139067676 5950129.791549647 4119286.8976174984 4452800.510209058 4868238.664440471 5759023.490500591 0.7914223484454062 0.970120931754676 0.8244322199282481 0.6454794416931805 0.6848248050338928 1.0331838030117924 0.7152752379656361 0.7731867247205843 0.8453236338539938 1.0 22.45739277598393 -8.088387768543347 6.767398876943149 0.9999987099955691 0.8063475389849506 0.20967210721766183 0.11352016162964057 2.3777168260459396 181.38193726615657 0.11305827840311802 0.029288476959092737 8.158535948014074e-09 8.088387768543347 -0.19365117101061846 MQAS(ph)IEK ddPTM_KYSE-520_SHP099_60min_R1 14 MQASIEK 7 0 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 1 MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK;MQAS(1)IEK 152.54 0.00077763 221922900000.0 287312900.0 250620300.0 249960400.0 223158200.0 224563100.0 233428900.0 237559600.0 236560700.0 276079900.0 227065800.0 True False 271375080.6929338 238580124.59926045 266073247.3347804 244367088.2330409 242234938.38074163 231971983.64904627 261574442.72627178 235740126.14538264 225950749.56792012 225054173.66651908 1.2058211419578122 1.060100866881873 1.1822631102547008 1.0858145141317812 1.0763405736242007 1.0307384211979906 1.1622732361047778 1.0474816898739137 1.0039838225916644 1.0 27.74569707908633 -1.000000000000012 0.11418060338554412 0.9565678112108738 1.5943128096937347 0.4694031336877952 0.050918058781172004 98.40483407379928 0.781054837216833 0.4122581812285514 9.924421642446449 0.09999999999999724 1.000000000000012 0.6377449984828609 MQEAMTQEVSDVFSDTT(ph)TPIK ddPTM_KYSE-520_SHP099_60min_R1 1 MQEAMTQEVSDVFSDTTTPIK 21 0 P18206-2;P18206 P18206-2 VCL Vinculin 1 MQEAMTQEVSDVFSDT(0.018)T(0.59)T(0.392)PIK 153.24 6.774899999999999e-07 49185000.0 73543.0 96332.0 51554.0 52378.0 61115.0 79278.0 60346.0 86247.0 86973.0 81096.0 True False 69463.4231856641 91704.06612272003 54877.25332931648 57355.98937198004 65924.40280321667 78783.196595319 66446.36260020474 85947.82928720114 71180.89561091093 80377.55253173319 0.8642142115267795 1.1409163781954559 0.6827435222993491 0.7135821826539915 0.8201842520296896 0.9801641641702794 0.8266781023715745 1.0693013979651693 0.8855817746230652 1.0 16.29450502805722 -6.904555496608448 1.4627062834420284 0.9772862390378099 0.8529210832697665 0.12958727362965572 0.13137490018420128 0.9557872232768302 4.046046497309401 0.09017758752775452 0.046841653502520765 1.245789033121001e-07 6.904555496608448 -0.12436515576804341 MQEAMTQEVSDVFSDTTT(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 2 MQEAMTQEVSDVFSDTTTPIK 21 0 P18206-2;P18206 P18206-2 VCL Vinculin 1 MQEAMTQEVSDVFSDTT(0.003)T(0.997)PIK;MQEAMTQEVSDVFSDT(0.004)T(0.141)T(0.855)PIK 204.31 9.0849e-14 191193000.0 123523.0 176034.0 126313.0 110416.0 112906.0 150066.0 124649.0 160272.0 171069.0 147660.0 True False 116670.93295300438 167577.06240757924 134455.3380879456 120909.90344221907 121791.05985273636 149129.3824298436 137249.73737700775 159716.05383976607 140007.18189855386 146351.84727774165 0.7971948091067834 1.1450286793412119 0.9187129550389668 0.8261590522513891 0.8321798605083909 1.0189784768950052 0.9378066620268878 1.0913155987478742 0.9566478626870552 1.0 17.159081430238942 -6.294461545548078 24.671064172863964 1.0027105184463536 0.913762571581011 0.19388744395756896 0.09792028260293945 1078.7573652740025 805942.6832570428 0.035450688358926084 0.031266809938913655 5.076196840451692e-07 6.294461545548078 -0.08894794686534258 MQFS(ph)FEGPEK ddPTM_KYSE-520_SHP099_60min_R1 2 MQFSFEGPEK 10 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;A0A2R8Y695;A0A3B3IU98;A0A0C4DGT3;Q6DN90-2 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 MQFS(1)FEGPEK;MQFS(1)FEGPEK 170.0 4.6253e-05 851060000.0 774260.0 920490.0 775180.0 784150.0 1028780.0 651280.0 809430.0 763270.0 886920.0 836700.0 True False 731310.2543509563 876268.278716341 825149.3431318534 858675.3802367054 1109739.133042513 647215.11993995 891255.0836755323 760622.3945185571 725877.6854337458 829287.48894275 0.8818537167168603 1.0566519939104426 0.9950099985034474 1.0354375191785683 1.3381838600475062 0.7804472255635712 1.0747238992014507 0.9171998910634317 0.875302829371223 1.0 19.661512801696457 MQHLIAR ddPTM_KYSE-520_SHP099_60min_R1 3 MQHLIAR 7 0 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;; 114.72 0.0085519 1585430000.0 1337290.0 1373510.0 901040.0 820310.0 1195840.0 1150790.0 957100.0 998060.0 1151250.0 890400.0 False True 1263107.8578784761 1307524.5179194591 959122.4801149726 898272.0157648054 1289945.8046011387 1143607.4927461252 1053853.0083958488 994597.9628089542 942212.0206507894 882511.7487207175 1.431264637223774 1.4815944601472297 1.0868098713760008 1.0178584217909097 1.4616755034378122 1.2958552613082943 1.1941518171554162 1.1270081834612582 1.0676481327490688 1.0 19.751255959288947 -1.0000000001143874 0.10511041442459816 0.8851211806004211 2.403140401556853 0.3816531993713328 0.13992229003825668 146.73660658623433 1.087085880080536 1.6695510367137267 32.20404114095608 0.09999999997366132 1.0000000001143874 1.518019220956432 MQMELSHK ddPTM_KYSE-520_SHP099_60min_R1 3 MQMELSHK 8 0 Q9Y6D9;C9JJ38 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 0 ;; 87.476 0.0033715000000000004 1845270000.0 1914080.0 2211500.0 1316430.0 2941010.0 3259400.0 1717910.0 1908730.0 2638550.0 1913360.0 1795370.0 False True 1807902.1667761202 2105256.2204708257 1401289.1841624733 3220522.7061531004 3515896.236550839 1707187.8864636414 2101683.0558096436 2629397.4858921967 1565942.055880476 1779464.4185767218 1.0159810715530597 1.1830841901040559 0.7874780577423817 1.8098269752024532 1.9758171053304772 0.9593829854879089 1.1810761900429814 1.4776342018657957 0.8800075121102852 1.0 20.76301165493606 -7.7729220501891865 24.962562047287054 0.9400035151559698 1.3022502643369207 0.1421180863311654 0.3525148724186281 515.0070104833984 1119553.802355078 0.3492419138818986 0.09335708289937197 1.6868557653351196e-08 7.7729220501891865 0.3622467491809509 MQNNS(ph)SPSIS(ph)PNTSFTSDGSPSPLGGIK ddPTM_KYSE-520_SHP099_60min_R1 1 MQNNSSPSISPNTSFTSDGSPSPLGGIK 28 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 2 MQNNS(0.436)S(0.292)PS(0.274)IS(0.525)PNT(0.46)S(0.012)FTSDGSPSPLGGIK 118.37 4.6902e-06 0.0 112180.0 112250.0 93643.0 87977.0 99420.0 88673.0 87824.0 96724.0 107730.0 88399.0 True False 105957.15177471416 106857.34150931492 99679.37761409742 96338.30762875045 107243.78837757993 88119.55891542065 96702.10699964155 96388.48701955126 88168.94765229936 87615.85363338124 1.2093376641410132 1.2196119432499914 1.137686542793895 1.0995533757151685 1.2240226389430569 1.0057490198537256 1.1037055851134057 1.100126096161525 1.0063127162035366 1.0 16.418904321166462 -3.391231290726535 0.17210933165810346 0.9703117714135191 1.535522881006134 0.6171544136742915 0.051624373528769044 17.65640525245045 0.4020769649817351 0.15085037254600206 2.2522538284785827 0.0004062269286607673 3.391231290726535 0.565211109592615 MQNNSS(ph)PSIS(ph)PNTSFTSDGSPSPLGGIK ddPTM_KYSE-520_SHP099_60min_R1 1 MQNNSSPSISPNTSFTSDGSPSPLGGIK 28 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 2 MQNNS(0.048)S(0.893)PS(0.069)IS(0.984)PNT(0.004)S(0.001)FTSDGSPSPLGGIK 184.78 2.138e-15 551880000.0 487240.0 462450.0 418950.0 412500.0 410090.0 377370.0 436300.0 430880.0 514190.0 422390.0 True False 460211.8259111403 440233.2078483988 445956.1873437011 451703.87597735313 442361.7499070792 375014.69385170616 480405.4618776609 429385.37784814805 420826.05767507525 418647.95321444736 1.099281203640335 1.051559441454846 1.065229589490589 1.0789587588070049 1.0566437659865608 0.8957757728714116 1.1475165665782654 1.0256478612907503 1.005202711356652 1.0 18.675378046189 -6.016489057246255 24.985380772955985 1.0193340436792226 1.0710924229945449 0.18861336023649922 0.05795098474642197 1413.720790917282 2142169.1073456258 0.018716552554425323 0.019223784258988016 9.627442705708451e-07 6.016489057246255 0.051758379315322234 MQNNSSPS(ph)ISPNTSFTSDGSPSPLGGIK ddPTM_KYSE-520_SHP099_60min_R1 1 MQNNSSPSISPNTSFTSDGSPSPLGGIK 28 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 MQNNSS(0.001)PS(0.996)IS(0.003)PNTSFTSDGSPSPLGGIK 136.4 1.7040000000000001e-06 88438000.0 123960.0 154220.0 108390.0 111520.0 109860.0 171400.0 113570.0 156210.0 165360.0 149180.0 True False 117083.69169186635 146811.03971106067 115376.99283013183 122118.82727028948 118505.35698210564 170330.2290223983 125050.76393638739 155668.14396968816 135334.7923863755 147858.3812602837 0.7918637462002044 0.9929165899132946 0.7803209520265679 0.8259175180290701 0.8014787932345464 1.151982238480997 0.8457468752904393 1.0528192087782733 0.9153001083390587 1.0 17.17385649848307 -6.21730484689633 24.99997909905568 0.9872571990385575 0.8431470796783499 0.4039283269357281 0.09372259465123085 484.74213602062207 274581.83493518253 0.029309127461950593 0.02930901598001004 6.063105890041076e-07 6.21730484689633 -0.14411011936020757 MQS(ph)LQLDCVAVPSSR ddPTM_KYSE-520_SHP099_60min_R1 4 MQSLQLDCVAVPSSR 15 0 Q13546-2;Q13546 Q13546-2 RIPK1 Receptor-interacting serine/threonine-protein kinase 1 1 MQS(1)LQLDCVAVPSSR;MQS(1)LQLDCVAVPSSR;MQS(1)LQLDCVAVPSSR;MQS(1)LQLDCVAVPSSR 242.67 1.1497e-17 1096010000.0 1402700.0 1225050.0 922540.0 862370.0 1045650.0 1331220.0 1074200.0 1474350.0 1561840.0 1408950.0 True False 1324889.4347868732 1166196.7591624612 982008.4045161908 944329.3855190041 1127936.706065345 1322911.3621890147 1182790.6191817166 1469235.8239658768 1278249.2267823939 1396467.7991465137 0.9487432761404255 0.8351046546688807 0.7032087708118797 0.6762271110699113 0.8077069208145808 0.9473267933550241 0.8469873919789692 1.0521086306922631 0.915344576913 1.0 20.41335087652797 -6.232319151718732 4.204158554046468 0.9503298006373861 0.7828014881751714 0.4612389972321691 0.08534261460069265 0.21090516543070723 8.762753963534992 0.03149542933727155 0.03028242577119209 5.857075850526077e-07 6.232319151718732 -0.16752831246221478 MQS(ph)LSLNK ddPTM_KYSE-520_SHP099_60min_R1 1 MQSLSLNK 8 0 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 1 MQS(0.998)LS(0.002)LNK 122.77 0.00091254 485320000.0 1480900.0 1078900.0 1025400.0 892910.0 826200.0 1112000.0 1018900.0 1154400.0 1030400.0 1329300.0 True False 1398751.5248990376 1027068.0245380844 1091498.9246980096 977771.8979368196 891217.2395650428 1105059.5955245432 1121900.3555057268 1150395.6558389843 843305.3342702055 1317523.436179751 1.0616521015784075 0.7795444060685084 0.8284474452028612 0.7421286567561453 0.6764336899760871 0.8387399913953248 0.8515221245390163 0.8731500512618089 0.6400685643326594 1.0 20.32939719415409 -4.259127766236137 24.65011482135489 0.7968914570931298 1.0616522134414252 0.385322019202892 0.09757224203026427 173.80703652146065 1853261.270569718 0.023180622129171564 0.15062349358003127 5.5064567667385266e-05 4.259127766236137 0.26476075634829543 MQVDQEEPHVEEQQQQT(ph)PAENKAESEEMETSQAGSK ddPTM_KYSE-520_SHP099_60min_R1 1 MQVDQEEPHVEEQQQQTPAENKAESEEMETSQAGSK 36 1 P34932;A0A087WYC1 P34932 HSPA4 Heat shock 70 kDa protein 4 1 MQVDQEEPHVEEQQQQT(0.955)PAENKAES(0.045)EEMETSQAGSK 220.85 2.4177e-22 970680000.0 315230.0 256130.0 243090.0 255640.0 270320.0 265580.0 249670.0 315820.0 374850.0 322900.0 True False 297743.5635045746 243825.1303410322 258759.97035775214 279935.94873903116 291592.64608959376 263922.416708101 274909.08014438587 314724.494132942 306786.6891995214 320039.3572123986 0.9303342129479809 0.7618598301933666 0.8085254657789556 0.8746922602811246 0.911114959826876 0.8246561266930217 0.8589852277510313 0.9833930953812993 0.9585905054668576 1.0 18.28788980756097 -7.24184763836083 5.823044809578333 0.9788252480879264 0.849231972096729 0.6098980730168777 0.04678482388105328 0.1160518622091629 14.685565215194373 0.024066375558065886 0.012995375403280213 5.729970177730698e-08 7.24184763836083 -0.1295932759911974 MQYAPDLMKR ddPTM_KYSE-520_SHP099_60min_R1 1 MQYAPDLMKR 10 1 Q9P2G3-2;Q9P2G3 Q9P2G3-2 KLHL14 Kelch-like protein 14 0 53.756 0.033449 333110000.0 189610.0 97647.0 70418.0 128100.0 89531.0 80229.0 72724.0 31126.0 144680.0 31359.0 False True 179091.95532183582 92955.89154886479 74957.25695278365 140274.58548533067 96576.58033829328 79728.26105156352 80075.65163784314 31018.03117086302 118409.7590859991 31081.183656932833 5.762069980944511 2.99074490131686 2.4116603080547097 4.513167420959582 3.107236243132952 2.565161672463516 2.576338550091924 0.9979681441103764 3.8096927193307564 1.0 14.923753826135181 -1.000000000000002 0.150635327271356 1.0120473764114934 14.11007660963346 0.4513874687750441 1.0290353447974812 67.25273628617408 0.6648447369814529 3.5888565028908346 192.70674157181998 0.09999999999999953 1.000000000000002 13.098029233221967 MQYAPNTQVEILPQGHES(ph)PIFK ddPTM_KYSE-520_SHP099_60min_R1 8 MQYAPNTQVEILPQGHESPIFK 22 0 H7C0X8;P40121-2;P40121 H7C0X8 CAPG Macrophage-capping protein 1 MQYAPNTQVEILPQGHES(1)PIFK;MQYAPNTQVEILPQGHES(1)PIFK;MQYAPNTQVEILPQGHES(1)PIFK;MQYAPNTQVEILPQGHES(1)PIFK;MQYAPNTQVEILPQGHES(1)PIFK;MQYAPNT(0.001)QVEILPQGHES(0.999)PIFK;MQYAPNTQVEILPQGHES(1)PIFK;MQYAPNTQVEILPQGHES(1)PIFK 214.3 1.3851e-19 2509380000.0 1758239.0 1808177.0 1416545.0 1327599.0 1369080.0 1823840.0 1302430.0 1611192.0 1889730.0 1640441.0 True False 1660705.9777074475 1721309.4627909902 1507857.757252135 1453773.609802805 1476818.807000374 1812456.7380409027 1434092.3348918646 1605603.1510070404 1546602.66821665 1625907.9689837843 1.021402200731824 1.0586758264471963 0.9273942843115331 0.8941303182808275 0.908304058515321 1.114735134223934 0.8820255280427666 0.9875117052354232 0.9512239915911714 1.0 20.632814168404835 -4.757050799181169 24.999982260183288 0.9565243485148394 1.0400390348033233 0.206139565490707 0.06420327979330541 165.79847357516604 944453.403832403 0.01646257933450674 0.04054149734810338 1.7496420220122378e-05 4.757050799181169 0.08351468628848391 MRDAGDPS(ph)PPNK ddPTM_KYSE-520_SHP099_60min_R1 7 MRDAGDPSPPNK 12 1 Q9BTA9-2;Q9BTA9;A0A0A0MRT2;Q9BTA9-5;Q9BTA9-3;E9PMZ7;C9JMU2;A0A494C0B7;A0A494C0C1;A0A494C0S5;C9JVK6;C9JD58;J3QTA0 Q9BTA9-2 WAC WW domain-containing adapter protein with coiled-coil 1 MRDAGDPS(1)PPNK;MRDAGDPS(1)PPNK;MRDAGDPS(1)PPNK;MRDAGDPS(1)PPNK;MRDAGDPS(1)PPNK;MRDAGDPS(1)PPNK;MRDAGDPS(1)PPNK 89.992 0.0043494 5446590000.0 7619910.0 6926600.0 6507020.0 5846460.0 6263970.0 6495600.0 5625680.0 5762140.0 7795840.0 5914240.0 True False 7197218.40238601 6593835.738961443 6926472.920800118 6402105.800597709 6756908.80188603 6455058.550979514 6194378.63574586 5742152.481233589 6380311.973133772 5861844.434809101 1.2278078141492674 1.124873887782759 1.1816200511342447 1.0921657631479267 1.152693299358443 1.101199225391885 1.056728595348264 0.9795811787728875 1.0884478501759414 1.0 22.482923250741685 -6.0798086694425395 0.39860588535471725 0.9976436124930758 1.2149727547495908 0.6979629060393917 0.0399943710039293 0.8965969308400951 0.27977897530737106 0.04034195812452155 0.07897718300004533 8.321302894286838e-07 6.0798086694425395 0.217329142256515 MREEFDK ddPTM_KYSE-520_SHP099_60min_R1 5 MREEFDK 7 1 H3BV41;H3BND3;O43809 H3BV41 NUDT21 Cleavage and polyadenylation specificity factor subunit 5 0 ;;;; 129.29 0.0022948 6443380000.0 6609540.0 5993240.0 3612880.0 3463130.0 5931260.0 6118720.0 4375820.0 4939900.0 5067270.0 5253070.0 False True 6242895.64040867 5705315.75436336 3845772.0256123873 3792264.833971999 6398016.417746979 6080530.798856054 4818170.589487746 4922764.63988133 4147181.5034815446 5206531.886626617 1.1990506879337537 1.0957996375702428 0.738643709354888 0.728366773996473 1.2288441820899594 1.167865852214287 0.9254088315224944 0.9454978375386184 0.7965343521920808 1.0 22.311891270809166 -4.534248490324059 24.827721864437926 0.9474636925801111 1.1732380223207666 0.22707112715480748 0.15686224579277214 272.39694146344425 594823.7756325658 0.04362815450037493 0.1156455091618448 2.92247974379954e-05 4.534248490324059 0.22577432974065548 MRKET(ph)PPPLVPPAAR ddPTM_KYSE-520_SHP099_60min_R1 1 MRKETPPPLVPPAAR 15 2 Q9BQA1-2;Q9BQA1 Q9BQA1-2 WDR77 Methylosome protein 50 1 MRKET(1)PPPLVPPAAR 59.294 0.04498 175220000.0 299740.0 262000.0 246730.0 211130.0 203530.0 231160.0 200390.0 255570.0 292220.0 249590.0 True False 283112.8246831237 249413.12672998267 262634.61058195785 231195.73172145063 219546.65307271047 229717.24469555178 220647.37681793346 254683.48732048634 239160.21426673108 247378.8267780816 1.1444505108640455 1.0082234198391038 1.0616697233250358 0.934581729295901 0.887491690101923 0.9286051182610966 0.8919412372178143 1.0295282366625402 0.966777219302106 1.0 17.91636249936926 -4.397950304483567 1.0519702718536141 0.9465210349394201 1.195591802379181 0.5659836836164157 0.0502897221540044 1.124051487647891 1.2012441461318684 0.017294957248946186 0.2986085271984458 3.9999051731954415e-05 4.397950304483567 0.24907076743976087 MRPFEGFQR ddPTM_KYSE-520_SHP099_60min_R1 1 MRPFEGFQR 9 1 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 0 128.27 0.0018862000000000002 0.0 282270.0 257570.0 183860.0 195970.0 330950.0 220210.0 218260.0 218360.0 201410.0 265500.0 False True 266611.9204087053 245195.95057954814 195711.90978640132 214594.9298794711 356993.88215208263 218835.58770724817 240323.85081232665 217602.560125607 164839.02113292116 263147.8765558742 1.0131638677771948 0.9317800842200058 0.7437335704468275 0.8154917785700093 1.3566283977833358 0.8316068918032208 0.9132654002674374 0.8269212086133002 0.6264121272432951 1.0 18.005514227638503 -7.098473802073082 2.2085761383265226 0.7943764889916899 0.9499670059218689 0.09705967596294351 0.1774117608153336 0.7513068923175921 7.095353702296833 0.11038669102894258 0.054215862237387974 7.971245740506121e-08 7.098473802073082 0.155590516930179 MRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVK ddPTM_KYSE-520_SHP099_60min_R1 1 MRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVK 41 2 A0A2R8Y5Y7;P32969;H0Y9V9 A0A2R8Y5Y7 RPL9 60S ribosomal protein L9 0 72.857 0.0058574 28804000.0 18504.0 16030.0 16073.0 27425.0 13640.0 8507.1 12480.0 17102.0 16928.0 6826.2 False True 17477.546233190515 15259.894738479463 17109.091297709274 30031.463754373068 14713.390399016203 8454.004033351477 13741.600193062572 17042.677153636796 13854.301920153384 6765.725178703241 2.583248029081247 2.2554706754146148 2.528788983561479 4.438764945538193 2.1746952485345052 1.249534057333943 2.03106094765977 2.518972719625496 2.0477186930032505 1.0 12.724028861236146 -5.984770571066952 24.998543269437572 1.862006515927174 2.9260336533397093 0.3991230903588603 0.6801593000246737 279.8788650417481 459408.32695870334 0.21904719246801302 0.24829337190827774 1.0356891556805391e-06 5.984770571066952 1.0640271374125354 MRT(ph)AGPT(ph)PAVSWR ddPTM_KYSE-520_SHP099_60min_R1 1 MRTAGPTPAVSWR 13 1 A0A6E1WCP9 A0A6E1WCP9 2 MRT(0.965)AGPT(0.987)PAVS(0.048)WR 76.357 0.007137699999999999 878590000.0 269960.0 252070.0 249530.0 257130.0 219320.0 249850.0 227000.0 244890.0 323040.0 213760.0 True False 254984.78064808177 239960.17883521627 265615.10306211613 281567.5578910462 236579.2362398999 248290.59347284798 249947.3753065069 244040.53374775584 264384.0791757056 211866.2527027636 1.2035176787018131 1.1326021760146334 1.2536923633362183 1.32898729410233 1.1166442660021332 1.171921390525492 1.1797413326471062 1.1518612834018966 1.2478819812168083 1.0 17.69279427953368 -5.8249762749330065 24.999994991036598 1.155383778468025 1.2244871086327598 0.22898532237790947 0.07465654449053023 115.96728308847129 45628.62832426843 0.023059709592412027 0.026147261768774185 1.496317396163197e-06 5.8249762749330065 0.0691033301647348 MRVSS(ph)GER ddPTM_KYSE-520_SHP099_60min_R1 2 MRVSSGER 8 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 MRVS(0.053)S(0.947)GER;MRVS(0.014)S(0.986)GER 103.22 0.0014218 849980000.0 318540.0 328490.0 323780.0 218799.0 255739.0 249705.0 190840.0 192131.0 375860.0 230637.0 True False 300869.9512062533 312708.8473264581 344651.37686631706 239593.59117568165 275864.20434413495 248146.4984716331 210131.969618915 191464.54240471232 307613.2986595489 228593.73561287066 1.316177586405011 1.367967702562237 1.507702632105339 1.048119671929416 1.2067881195629877 1.0855349898646196 0.9192376556406553 0.8375756312454792 1.3456768525822593 1.0 17.80242634288825 -5.2728542039399215 24.29257490526078 1.0574139417145565 1.394351143218648 0.5433642812844037 0.14023517080070544 370.89935996987754 789332.6340287334 0.040209606849179326 0.06026844499168028 5.3351397024719526e-06 5.2728542039399215 0.33693720150409145 MS(ph)ADMSEIEAR ddPTM_KYSE-520_SHP099_60min_R1 6 MSADMSEIEAR 11 0 O43318-3;O43318;Q9UG54;O43318-4;O43318-2 O43318-3 MAP3K7;DKFZp586F0420 Mitogen-activated protein kinase kinase kinase 7 1 MS(1)ADMSEIEAR;MS(1)ADMSEIEAR;MS(1)ADMSEIEAR;MS(1)ADMSEIEAR;MS(0.97)ADMS(0.03)EIEAR;MS(0.999)ADMS(0.001)EIEAR 178.15 5.6154e-06 2069240000.0 2361130.0 2342490.0 1993230.0 2029360.0 2357300.0 2212350.0 2161720.0 2370040.0 2671120.0 2201760.0 True False 2230153.4121040376 2229953.2642508284 2121716.7950807586 2222229.764250667 2542806.09879772 2198541.9030204345 2380247.753954107 2361818.884411497 2186111.9414555817 2182254.1193433586 1.021949456910679 1.0218577408032674 0.9722592691080287 1.0183185104580474 1.1652199788550985 1.0074637428944238 1.0907289544584866 1.0822840765777404 1.0017678152503082 1.0 21.057387679862742 -5.544331961962412 24.99844875841926 1.0639276783462541 1.0050528494004578 0.19251474733804896 0.04908919145234473 327.97510769107834 382172.2651394005 0.013894124844152 0.01793847151323986 2.8554071195667577e-06 5.544331961962412 -0.05887482894579632 MS(ph)AMESFIEKQTK ddPTM_KYSE-520_SHP099_60min_R1 1 MSAMESFIEKQTK 13 1 E9PJV7 E9PJV7 SNX19 1 MS(0.5)AMES(0.5)FIEKQTK 45.257 0.063003 577210000.0 37002.0 40421.0 29337.0 30834.0 33908.0 35166.0 30665.0 40418.0 56687.0 35414.0 True False 34949.425298341725 38479.11448684206 31228.109960859645 33764.45408941987 36576.36668987107 34946.51594983464 33764.917461559606 40277.79939163212 46394.06976298053 35100.25951167508 0.9957027607364787 1.096262962786446 0.8896831646065899 0.9619431468359688 1.0420540246349177 0.9956198739274477 0.9619563482238268 1.1475071680947224 1.3217585969000853 1.0 15.09919407659845 -7.337728218584409 5.207927796520281 1.1815923457066055 0.9930152835660041 0.4138665133143802 0.08875950993850952 0.19404478495115726 9.460224525086431 0.04821918718549355 0.02251142905904145 4.594854688136067e-08 7.337728218584409 -0.18857706214060144 MS(ph)DEFVDSFK ddPTM_KYSE-520_SHP099_60min_R1 11 MSDEFVDSFK 10 0 Q92934;F5H1R6;F5H3B1 Q92934 BAD Bcl2-associated agonist of cell death 1 MS(1)DEFVDSFK;MS(1)DEFVDSFK;MS(1)DEFVDSFK;MS(1)DEFVDSFK;MS(1)DEFVDSFK;MS(1)DEFVDSFK;MS(1)DEFVDSFK;MS(1)DEFVDSFK;MS(1)DEFVDSFK;MS(1)DEFVDSFK;MS(1)DEFVDSFK 260.6 1.0318000000000001e-19 2712166000.0 4543630.0 3931180.0 3355490.0 3870620.0 3975230.0 4139030.0 4240660.0 4434750.0 4311460.0 4010350.0 True False 4291585.786398157 3742320.211978519 3571790.2543738284 4238482.561055667 4288057.985035273 4113196.778474775 4669347.297653268 4419366.887328436 3528607.5470619393 3974821.419005089 1.0796927293081646 0.9415065024267767 0.8986039567201133 1.0663328271277588 1.0788051922364321 1.0348129751963353 1.1747313414704355 1.1118403624871827 0.8877398944743439 1.0 21.92245861369519 -5.2944346569121 24.311308727630735 1.0609574202206704 0.9700915937265955 0.14725833570063285 0.08259822606401891 724.895184958571 534109.6758174442 0.023487564696350997 0.03484086702623767 5.076511134646327e-06 5.2944346569121 -0.09086582649407493 MS(ph)DEFVDSFKK ddPTM_KYSE-520_SHP099_60min_R1 3 MSDEFVDSFKK 11 1 Q92934;F5H1R6;F5H3B1 Q92934 BAD Bcl2-associated agonist of cell death 1 MS(1)DEFVDSFKK;MS(1)DEFVDSFKK;MS(1)DEFVDSFKK 148.41 4.1216000000000007e-05 1313216000.0 1579580.0 1379660.0 1319510.0 1281840.0 1308800.0 1377640.0 1201350.0 1275120.0 1534170.0 1218570.0 True False 1491957.5485853353 1313379.06268812 1404567.725890646 1403665.6882007502 1411795.1139466565 1369041.6377503898 1322794.1820461315 1270696.9063352444 1255603.4012784578 1207774.4178331157 1.23529487506622 1.087437391698088 1.1629387948211387 1.162191935410493 1.168922849417176 1.1335242885890942 1.0952328203965227 1.0520978815025896 1.0396009244268916 1.0 20.203919589662487 -7.183027589852353 1.0001594952424404 1.0080258441236774 1.1612163097824206 0.752362098695353 0.0338418299199922 0.2708240711272632 0.4849924566613011 0.02830491803943537 0.011907034638886694 6.561035840417582e-08 7.183027589852353 0.15319046565874328 MS(ph)EREERR ddPTM_KYSE-520_SHP099_60min_R1 1 MSEREERR 8 2 E9PLV8;E9PK90;E9PP94;Q9Y6J9 E9PLV8 TAF6L TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L 1 MS(1)EREERR 61.65 0.048760000000000005 496590000.0 797800.0 619190.0 726690.0 566130.0 628260.0 617080.0 659280.0 649090.0 744180.0 685830.0 True False 753544.4436251292 589443.1829768613 773533.6001451103 619934.8249868086 677700.487689583 613228.5748257966 725926.4563527483 646838.458288745 609055.671251166 679754.0797676657 1.1085544994193848 0.8671418098414768 1.1379609525984715 0.9119986822273978 0.9969789190838183 0.9021329817327365 1.067925118744214 0.951577162302327 0.8959941387322548 1.0 19.37465337952159 -4.221005326589906 23.14910092351308 0.9738657301443572 1.108555515382198 0.21115505137231738 0.07994717763476439 15488.482281123295 8866913.225781703 0.018546962113024187 5.509138095406269 6.0116636417678206e-05 4.221005326589906 0.1346897852378408 MS(ph)GFIYQGK ddPTM_KYSE-520_SHP099_60min_R1 11 MSGFIYQGK 9 0 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;E7EUY6;F6SJA5;Q15052-2;Q15052 B1ALK7;Q15052-2 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK;MS(1)GFIYQGK 150.09 0.00011442 23310620000.0 20892670.0 19028420.0 19343430.0 16276630.0 17006990.0 18056190.0 16622910.0 15924690.0 20659970.0 18965070.0 True False 19733711.9465949 18114266.14095926 20590338.448382284 17823556.021452747 18345343.356463697 17943494.620606378 18303315.96676777 15869450.967240592 16908640.243461214 18797054.2344012 1.0498300265836062 0.9636757927637223 1.0954024067611152 0.9482100652150688 0.9759690602418537 0.9545907777276776 0.973733210455401 0.8442520178612514 0.8995367057310539 1.0 24.164003253007593 -6.0251819012647125 0.881670567331498 0.9149451437427443 1.0279592391494357 0.3637896964834456 0.053253436394237456 0.6068946534701135 1.0349246169721174 0.02972262005410366 0.03560197084819569 9.436655456601939e-07 6.0251819012647125 0.11301409540669138 MS(ph)GSEKEPQFK ddPTM_KYSE-520_SHP099_60min_R1 3 MSGSEKEPQFK 11 1 P86791;P86790 P86791 CCZ1;CCZ1B Vacuolar fusion protein CCZ1 homolog;Vacuolar fusion protein CCZ1 homolog B 1 MS(0.999)GS(0.001)EKEPQFK;MS(0.998)GS(0.002)EKEPQFK;MS(0.758)GS(0.242)EKEPQFK 103.67 0.0017436 1618870000.0 1174390.0 1175370.0 974430.0 1032680.0 1080370.0 997790.0 1003810.0 1159400.0 1302930.0 1074880.0 True False 1109244.245611576 1118903.460933661 1037243.3169431239 1130825.596713436 1165388.9725355671 991562.4224985916 1105284.9110415184 1155378.3120059934 1066350.7561924295 1065357.3994439847 1.0411944819555352 1.0502611250624647 0.9736106563717174 1.0614518632935948 1.0938948498821046 0.9307321871665724 1.0374780440989775 1.0844983219800144 1.000932416435051 1.0 20.022906067294123 -7.9390635960032325 24.999996689160383 0.9999881009179836 1.032882030973752 0.07719280976536824 0.04641441663384164 172.14901053267192 70625.28648155091 0.044783263262718316 0.011562988854767075 1.1506318835868033e-08 7.9390635960032325 0.03289393005576846 MS(ph)LGTK ddPTM_KYSE-520_SHP099_60min_R1 6 MSLGTK 6 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 MS(1)LGTK;MS(1)LGTK;MS(1)LGTK;MS(1)LGTK;MS(1)LGTK;MS(1)LGTK 137.84 0.006946300000000001 1673190000.0 4369820.0 4342920.0 4239140.0 4434510.0 4036680.0 3931880.0 4101770.0 4818230.0 5237300.0 5122290.0 True False 4127417.3735798006 4134279.6043441785 4512401.747263818 4855964.497115948 4354343.750432605 3907339.6784631643 4516416.941017495 4801516.6847133385 4286338.341589041 5076910.495681318 0.8129781640016688 0.814329818865432 0.8888086073414726 0.9564802257685421 0.8576758944512877 0.7696294196612189 0.8895994807982909 0.9457556300820659 0.8442808564845138 1.0 22.2755193953608 -13.999999999999895 0.16974292758778922 1.5227519426610403 0.8346613831454166 0.372900099601149 0.054555447637380815 159.11234396397188 1.498896131686055 27.952092120293084 0.21498566331368663 1.0000000000002414e-14 13.999999999999895 -0.6880905595156237 MS(ph)LPAR ddPTM_KYSE-520_SHP099_60min_R1 1 MSLPAR 6 0 C9JXU1;A6NN40;Q2M3G4-2;Q2M3G4 C9JXU1 SHROOM1 Protein Shroom1 1 MS(1)LPAR 110.12 0.0090221 847800000.0 1442400.0 1321400.0 1231500.0 1282500.0 1476000.0 1509200.0 1372700.0 1399500.0 1651400.0 1484200.0 True False 1362387.196646886 1257917.9605381642 1310884.4604696683 1404388.4144023135 1592152.802708791 1499780.5229906833 1511465.9122609782 1394645.461145756 1351547.3884062688 1471051.1426901263 0.9261317687129996 0.8551150425931465 0.8911209287206973 0.9546836093231226 1.0823232153555211 1.0195298310621745 1.027473395314418 0.9480604859157742 0.918763018622643 1.0 20.488415973648276 -5.406237074013508 3.851114715431134 1.000410829430703 0.887667931423481 0.5362234385787524 0.04484817854855853 0.19148362711220643 4.9826083750766 0.014132770141629728 0.021491803894068698 3.924306556603749e-06 5.406237074013508 -0.11274289800722204 MS(ph)LPDVDLDLK ddPTM_KYSE-520_SHP099_60min_R1 4 MSLPDVDLDLK 11 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MS(1)LPDVDLDLK;MS(1)LPDVDLDLK;MS(1)LPDVDLDLK;MS(1)LPDVDLDLK 191.53 7.5624e-07 271268000.0 1235620.0 1143460.0 933940.0 837280.0 853730.0 1229810.0 1023220.0 1013300.0 1109690.0 1240070.0 True False 1167077.6954525963 1088526.4652315497 994143.2667568356 916854.839462589 920913.6939407694 1222134.2996151447 1126657.0632648624 1009785.098805999 908198.269008447 1229083.9445598596 0.949550842819391 0.8856404560889093 0.8088489571091442 0.7459660046172996 0.7492683457601854 0.9943456710377878 0.9166640474408958 0.8215753718657578 0.738922897030989 1.0 20.22915202227188 -6.238935983192977 24.92077213580175 0.8845477455502 0.8254599724721599 0.11260678633982268 0.09110927902118479 2201.2487541027112 2437714.188483299 0.03226396009888066 0.03224043139778565 5.768514874262633e-07 6.238935983192977 -0.05908777307804014 MS(ph)LPDVDLDLKGPK ddPTM_KYSE-520_SHP099_60min_R1 2 MSLPDVDLDLKGPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MS(1)LPDVDLDLKGPK;MS(1)LPDVDLDLKGPK 58.723 0.037199 74092000.0 759640.0 751140.0 658280.0 541910.0 576460.0 799660.0 601610.0 679300.0 832680.0 793590.0 True False 717501.2548952026 715054.1069158735 700713.7820852408 593412.9634688178 621824.1223912671 794669.0253211838 662426.6099477864 676943.6668498112 681486.3021546145 786559.4100036783 0.9122022389788043 0.9090910334573832 0.8908593212074902 0.7544413758473028 0.7905621806601477 1.0103102387618343 0.8421825503869932 0.8606389526846364 0.8664142765152699 1.0 19.58519621309835 -6.207261547316416 24.999978804097086 0.9025923526885757 0.8514367304850317 0.16112949049834913 0.07035206822310333 785.3827026842 362409.1052783694 0.024480419615749004 0.024480397756697893 6.204952377650482e-07 6.207261547316416 -0.05115562220354408 MS(ph)LPLLAGGVADDINTNKK ddPTM_KYSE-520_SHP099_60min_R1 4 MSLPLLAGGVADDINTNKK 19 1 Q15398-1;Q15398-3;Q15398 Q15398-1 DLGAP5 Disks large-associated protein 5 1 MS(1)LPLLAGGVADDINTNKK;MS(1)LPLLAGGVADDINTNKK;MS(1)LPLLAGGVADDINTNKK;MS(1)LPLLAGGVADDINTNKK 196.92 3.3675e-13 5630841000.0 2393720.0 2241460.0 2220710.0 2108070.0 1962710.0 1889360.0 2108750.0 2304110.0 2532650.0 2089580.0 True False 2260935.579837485 2133776.897099949 2363860.5198616274 2308420.3389856433 2117164.110707705 1877567.803417491 2321923.029416723 2296117.5801933175 2072784.602910945 2071067.9468686418 1.0916761969378719 1.0302785576524036 1.1413727509209315 1.1146038653516257 1.0222571953318857 0.9065698719620889 1.1211235406000863 1.108663568312638 1.0008288748058212 1.0 20.981943455090423 -1.000000381554375 0.057813569344652184 0.9215155467755454 1.3290049741673975 0.11364695867287 0.06608269380839198 1017.0805988842465 4.413458042444946 6.517568003131791 35.28588893827741 0.09999991214389699 1.000000381554375 0.4074894273918521 MS(ph)LS(ph)SMEVDVQAPRAK ddPTM_KYSE-520_SHP099_60min_R1 1 MSLSSMEVDVQAPRAK 16 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 2 MS(0.939)LS(0.531)S(0.531)MEVDVQAPRAK 60.401 0.028368 469020000.0 953650.0 846680.0 743930.0 485070.0 671400.0 798030.0 759180.0 871740.0 989030.0 870220.0 True False 900749.1334458569 806004.22190741 791884.9181300849 531170.9069583864 724235.3602565607 793049.1987558012 835925.3232827927 868716.1374056463 809447.083417374 862510.5278209157 1.0443340740681146 0.9344862420911363 0.9181162346281587 0.6158428098267505 0.839682922000153 0.9194661087319077 0.9691769506799076 1.007194821842243 0.9384779168578921 1.0 19.71818254088725 -6.578380483905427 3.158954676207818 0.9795004078582027 0.8633560182334264 0.195162990577887 0.10282983884669109 0.45089780048004285 9.192814654826382 0.046131554554872195 0.035372523014322144 2.64009476586439e-07 6.578380483905427 -0.11614438962477625 MS(ph)NELENYFK ddPTM_KYSE-520_SHP099_60min_R1 6 MSNELENYFK 10 0 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 MS(1)NELENYFK;MS(1)NELENYFK;MS(1)NELENYFK;MS(1)NELENYFK;MS(1)NELENYFK;MS(1)NELENYFK 178.67 1.8812e-05 947675000.0 917052.0 826503.0 692572.0 933589.0 946939.0 1050084.0 1078362.0 1264592.0 1089602.0 1136291.0 True False 866181.2974621609 786796.5552737039 737216.2992743793 1022317.0178662314 1021457.7119541062 1043530.0362471181 1187373.3547589232 1260205.425509991 891757.7434311779 1126224.345761022 0.7691019118192276 0.698614408607943 0.6545909809614541 0.9077383398024684 0.9069753427003728 0.9265738573090204 1.0542955843816189 1.1189648228199454 0.7918118151038475 1.0 20.10306281261947 -5.485229701172117 2.1112693308422967 0.9793831899784027 0.7051661004446633 0.625001360195172 0.08858299231543036 0.204545120794436 1.8144681262610742 0.028434383998967038 0.04524770901267101 3.271676080367299e-06 5.485229701172117 -0.27421708953373936 MS(ph)PDTVPK ddPTM_KYSE-520_SHP099_60min_R1 1 MSPDTVPK 8 0 A0A087WV20;A0A087WTU9;Q8TCU4-3;Q8TCU4-2;Q8TCU4 A0A087WV20 ALMS1 Alstrom syndrome protein 1 1 MS(0.992)PDT(0.008)VPK 83.43799999999999 0.012037 0.0 628010.0 540790.0 556230.0 557660.0 572630.0 539470.0 512670.0 527650.0 597770.0 513280.0 True False 593173.0333931022 514809.6366576611 592085.475799467 610659.8387334073 617692.7231809859 536102.967623764 564495.6867770343 525819.7053044352 489230.0365554168 508732.73852579755 1.1659816411894293 1.011945168202607 1.1638438633126078 1.2003549063953962 1.2141792269373737 1.0538008015314282 1.1096114797188525 1.0335873150765806 0.9616641499682219 1.0 18.956548413514547 -7.219598507216506 1.3471387334153277 0.9793328509122218 1.1405526644513357 0.5389281648059673 0.058546736427902854 0.38514262253368264 1.2514962154237181 0.05079484999995158 0.020043729541705652 6.03116892684441e-08 7.219598507216506 0.16121981353911397 MS(ph)PKPELTEEQK ddPTM_KYSE-520_SHP099_60min_R1 5 MSPKPELTEEQK 12 1 P41208 P41208 CETN2 Centrin-2 1 MS(1)PKPELTEEQK;MS(1)PKPELTEEQK;MS(1)PKPELTEEQK;MS(1)PKPELTEEQK;MS(1)PKPELTEEQK 191.93 4.9757e-08 3138160000.0 5636690.0 4423450.0 3772310.0 4564600.0 5059820.0 4809750.0 4849330.0 5566150.0 5075120.0 4863800.0 True False 5324011.569237067 4210940.822266185 4015479.1385094067 4998418.211602967 5457999.047562331 4779730.566163825 5339547.601300012 5546842.324799183 4153606.141363939 4820710.515979147 1.1044039154787735 0.8735104106144175 0.8329641709866938 1.0368633824899411 1.132198050364313 0.9914991888271478 1.1076266835772617 1.1506275488671507 0.8616170018083505 1.0 22.200814367716163 -5.435543071545703 9.768580506276479 1.05222335654984 0.9309253866517064 0.16954473466954012 0.10241269814407565 0.6963512583956647 74.16741393797467 0.028344161067451936 0.04204434273656968 3.6682331260544473e-06 5.435543071545703 -0.12129796989813357 MS(ph)PKPELTEEQKQEIR ddPTM_KYSE-520_SHP099_60min_R1 2 MSPKPELTEEQKQEIR 16 2 P41208 P41208 CETN2 Centrin-2 1 MS(1)PKPELTEEQKQEIR;MS(1)PKPELTEEQKQEIR 118.36 9.9743e-05 2593700000.0 3342200.0 3131200.0 2930100.0 2863800.0 3049800.0 2902400.0 2613900.0 2803800.0 3827600.0 2907200.0 True False 3156801.5034894794 2980772.4519729814 3118978.934325761 3135974.6909671333 3289801.909011706 2884285.045009383 2878138.5212056283 2794074.2722118394 3132604.325943946 2881444.469767373 1.0955621517649226 1.0344715934135726 1.0824358987482292 1.0883342448103153 1.141719697717201 1.0009858164097256 0.9988526766361694 0.9696783337412062 1.087164565832098 1.0 21.458360786181103 -6.287730246152021 24.99803134606669 1.0086609393988526 1.0851562528771688 0.517286064153718 0.03715740452073222 639.6980832881148 608238.9115683372 0.013122478266372705 0.011575781311339958 5.155487685716464e-07 6.287730246152021 0.07649531347831617 MS(ph)PPPSGFGER ddPTM_KYSE-520_SHP099_60min_R1 2 MSPPPSGFGER 11 0 A0A087WZ13;Q8IY67-2;E9PAU2;K7EQG2 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 MS(1)PPPSGFGER;MS(0.999)PPPS(0.001)GFGER 108.72 0.00042163 1787730000.0 1917950.0 1748300.0 1540430.0 1884720.0 1667710.0 1800430.0 1652110.0 1659030.0 2013020.0 1775430.0 True False 1811557.4901614625 1664309.0437482 1639728.582575143 2063843.222138269 1798949.289028104 1789192.8485344013 1819121.4018397941 1653275.2121505134 1647506.3121046275 1759701.0714636403 1.0294688794243276 0.9457907770459573 0.931822233427005 1.1728373958547726 1.0223039118410144 1.016759538053944 1.033767286580516 0.9395204895655336 0.9362421486362487 1.0 20.746898941740607 -9.674435800579339 5.518132472473943 0.9999999999613851 1.0043629298134358 0.0 0.06920401573596843 2.1604299154809025e-10 2.0652019447829265e-18 0.07013191598979827 0.017009487319197943 2.1162364939945446e-10 9.674435800579339 0.004362929852050668 MS(ph)PSKSPFLPSMK ddPTM_KYSE-520_SHP099_60min_R1 3 MSPSKSPFLPSMK 13 1 A0A1B0GV63;A0A1B0GWJ2;A0A1B0GTJ8;A0A1B0GVK1;H0Y7H8;A0A3F2YNW7;Q8NFD5-4;Q8NFD5;Q8NFD5-2;Q8NFD5-3 A0A1B0GV63 ARID1B AT-rich interactive domain-containing protein 1B 1 MS(0.786)PS(0.152)KS(0.061)PFLPSMK;MS(0.996)PS(0.004)KSPFLPSMK;MS(0.994)PS(0.006)KSPFLPSMK 200.33 6.778499999999999e-09 2165870000.0 3671820.0 3361280.0 2931260.0 2557690.0 3019000.0 3083570.0 2446580.0 2359120.0 3547610.0 2798320.0 True False 3468136.825008298 3199799.063415857 3120213.709781829 2800772.0886024637 3256578.124239734 3064324.295837783 2693904.182719795 2350936.763342749 2903453.451970427 2773529.061860017 1.2504418549998733 1.1536922786992432 1.124997661891927 1.0098225135323358 1.1741640529469588 1.104846651140821 0.9712911322130431 0.8476337225636048 1.04684443076406 1.0 21.403291411853118 -6.741800242478087 4.002923935320586 0.9510336169355427 1.1349678139322823 0.565501374447423 0.07306752104852278 0.15783905275140625 5.577243228045341 0.030861615185721575 0.022037678621749258 1.812173425874425e-07 6.741800242478087 0.18393419699673963 MS(ph)PSQFAR ddPTM_KYSE-520_SHP099_60min_R1 1 MSPSQFAR 8 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 MS(0.977)PS(0.023)QFAR 114.45 0.0025915 0.0 277970.0 258330.0 228940.0 238130.0 260490.0 259610.0 222550.0 240500.0 258220.0 245610.0 True False 262550.44998054276 245919.43903876486 243697.8387169517 260761.80360360516 280989.08101464325 257989.67769255996 245047.52587869173 239665.76163312196 211333.7571964795 243434.08648168878 1.078527883153668 1.0102095503263182 1.001083464682678 1.0711803238911646 1.154271717144178 1.0597927407013563 1.006627828585231 0.9845201429962839 0.8681354376079791 1.0 17.89317166777608 -7.172328550412209 2.0981806757744623 0.937242080737928 1.0609148922528422 0.4994269349461553 0.05047366050601606 0.294279857930816 2.4696619471905077 0.035085295385194386 0.015812909924179306 6.724677316886682e-08 7.172328550412209 0.12367281151491416 MS(ph)PTPPLFSLPEAR ddPTM_KYSE-520_SHP099_60min_R1 5 MSPTPPLFSLPEAR 14 0 A0A087WWS1;Q96FV9;J3KRD7;J3QQZ3;J3KT14;Q96FV9-2 A0A087WWS1 THOC1 THO complex subunit 1 1 MS(0.965)PT(0.035)PPLFSLPEAR;MS(0.968)PT(0.032)PPLFSLPEAR;MS(0.988)PT(0.012)PPLFSLPEAR;MS(1)PTPPLFSLPEAR;MS(0.995)PT(0.005)PPLFSLPEAR 183.81 1.2866999999999998e-10 1090438000.0 860940.0 786041.0 760691.0 629845.0 769738.0 777585.0 665086.0 783757.0 896520.0 793276.0 True False 813181.9419586605 748278.4104884041 809726.3590086331 689705.2794301965 830312.0013898778 772731.8035844899 732319.3834938472 781038.3298972597 733734.5674300514 786248.1917993899 1.034256040828063 0.9517076392581724 1.0298610126600247 0.8772106398766432 1.0560431299557516 0.9828090056602016 0.9314099429823521 0.9933737693053296 0.9332098630978636 1.0 19.58462526854632 -6.549020307404714 24.89049284402318 0.9629695235679354 0.9872433532573878 0.05046520786976949 0.05129051647664747 748.9995417579764 713147.9505559105 0.01857522764867426 0.014388795680420018 2.8247478879513854e-07 6.549020307404714 0.024273829689452353 MS(ph)S(ph)PEDDSDTKR ddPTM_KYSE-520_SHP099_60min_R1 1 MSSPEDDSDTKR 12 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 2 MS(1)S(0.999)PEDDS(0.001)DTKR 141.73 0.00020613 182430000.0 837270.0 773640.0 610520.0 840930.0 808580.0 775390.0 773820.0 865110.0 858670.0 783850.0 True False 790824.9640436338 736473.1731426853 649875.0960665382 920851.7343651771 872210.6458091285 770550.503393684 852045.2773554231 862109.135328193 702757.1733091973 776905.6988260711 1.0179162866723659 0.9479569711684692 0.8364916064440252 1.1852812197884672 1.1226724776598578 0.9918198625109972 1.0967164723374925 1.1096702426444638 0.9045591689841964 1.0 19.56737996870375 -5.255587493955262 24.99884854442818 1.064709890853905 0.9355051647017282 0.30731765184203075 0.08534745654599254 585.1717095544914 2499805.6022962593 0.02340247037290134 0.03924187379499309 5.551527635129178e-06 5.255587493955262 -0.12920472615217682 MS(ph)SPEDDS(ph)DTKR ddPTM_KYSE-520_SHP099_60min_R1 1 MSSPEDDSDTKR 12 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 2 MS(0.99)S(0.024)PEDDS(0.98)DT(0.006)KR 99.669 0.0030480999999999998 212910000.0 835630.0 723560.0 658490.0 777950.0 789640.0 808160.0 816430.0 825160.0 837670.0 829940.0 True False 789275.9381128934 688799.0915142972 700937.3190212521 851886.1341008029 851780.1755629873 803115.9736682686 898962.7119889476 822297.7125537916 685570.2439422777 822587.3772835495 0.9595040720407584 0.8373567483966692 0.8521129042071793 1.0356178050215255 1.0354889937356466 0.9763290756058259 1.0928476862331806 0.999647861445778 0.8334315148455756 1.0 19.64980940809112 -5.259075414364772 24.873217919039853 1.0010167689037124 0.8784277874205076 0.3550851286083253 0.06961922332876956 206.95748135073822 2177557.717649812 0.01948500544722947 0.031783481965831986 5.507120580588213e-06 5.259075414364772 -0.12258898148320474 MS(ph)SPEDDSDTKR ddPTM_KYSE-520_SHP099_60min_R1 3 MSSPEDDSDTKR 12 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 MS(0.875)S(0.125)PEDDSDTKR;MS(0.496)S(0.496)PEDDS(0.003)DT(0.004)KR;MS(0.499)S(0.499)PEDDS(0.002)DTKR 184.34 4.2130999999999995e-08 779490000.0 2415990.0 2360890.0 2194130.0 2186820.0 2275440.0 2175250.0 2210680.0 2417650.0 2987720.0 2080370.0 True False 2281970.2185433363 2247469.300631862 2335567.130532128 2394654.71530859 2454504.1825174075 2161673.4578819806 2434157.108557655 2409263.7364337547 2445225.3622920997 2061939.5403033702 1.1067105382767883 1.089978273708838 1.1327039832547656 1.1613602962171568 1.1903861071291546 1.0483689825182443 1.180518177656907 1.168445383262442 1.185886062368413 1.0 20.975570600292425 -4.857367745522069 5.136215157409608 1.1417017254100628 1.0985911156679808 0.03986220364842963 0.05990130729787172 0.5218135833882527 21.93678736021974 0.015080988350662876 0.033065615513552686 1.3887761656426278e-05 4.857367745522069 -0.04311060974208192 MS(ph)T(ph)VARATTTASSPRK ddPTM_KYSE-520_SHP099_60min_R1 1 MSTVARATTTASSPRK 16 2 Q969X2-3 Q969X2-3 2 MS(0.989)T(0.888)VARAT(0.076)T(0.015)T(0.015)AS(0.015)S(0.002)PRK 52.453 0.05757 0.0 216230.0 253050.0 203190.0 167700.0 168830.0 249630.0 172100.0 213060.0 282370.0 231430.0 True False 204235.29085618132 240893.0981642062 216287.95251549466 183638.1575791566 182115.96048870267 248071.9665744531 189497.54753414012 212320.94458857787 231098.72596843744 229379.71024981563 0.8903808040988032 1.050193575978675 0.9429253889977329 0.800585881720566 0.7939497364015397 1.0814904522474107 0.8261303814873593 0.9256308866958669 1.0074941925628456 1.0 17.807378258046192 -7.730211024347692 5.649289005822134 1.0046025472548987 0.9138530057486202 0.13521782821168848 0.09114724168844601 0.3531945962401494 30.428251423358898 0.07137343802592587 0.023971963582278367 1.861182565481957e-08 7.730211024347692 -0.09074954150627856 MS(ph)TSQNS(ph)IPFEHHGK ddPTM_KYSE-520_SHP099_60min_R1 1 MSTSQNSIPFEHHGK 15 0 P48730-2 P48730-2 CSNK1D Casein kinase I isoform delta 2 MS(0.334)T(0.334)S(0.336)QNS(0.995)IPFEHHGK 63.302 0.019993 421480000.0 546140.0 536880.0 540820.0 581320.0 533920.0 467810.0 487220.0 544430.0 666220.0 533120.0 True False 515844.525496902 511087.47892669076 575682.1225425947 636568.4780197687 575936.4664107576 464890.2242646916 536472.9524089708 542541.4994009171 545251.2420394956 528396.9715610832 0.9762442884048018 0.9672414991644375 1.089487929580318 1.2047163634172735 1.0899692795536373 0.8798124313453788 1.0152839272034964 1.0267687526634486 1.0318969853832025 1.0 19.011262672425172 MS(ph)TVARATTTASSPR ddPTM_KYSE-520_SHP099_60min_R1 1 MSTVARATTTASSPR 15 1 Q969X2-3 Q969X2-3 1 MS(0.788)T(0.184)VARAT(0.008)T(0.008)T(0.003)AS(0.008)S(0.002)PR 68.413 0.05776799999999999 0.0 195260.0 160520.0 152390.0 151470.0 155980.0 169510.0 165490.0 154970.0 184990.0 159110.0 True False 184428.53855883997 152808.37825456788 162213.30323262108 165865.66325888407 168254.73859520126 168452.02521345802 182219.34422675674 154432.44524026997 151400.47921840582 157700.40918570684 1.1694867471247856 0.9689789585429792 1.0286168822910275 1.0517769999160997 1.0669264554479736 1.0681774770482058 1.1554779417989751 0.9792773908304288 0.9600512769761917 1.0 17.266826877935078 -7.462454572898811 24.91734955283679 0.9765717094320433 1.0659842204200736 0.3683109543929942 0.05527892073444974 248.42365741936615 102443.48939916494 0.03005752531939516 0.014439116159433376 3.447826688735527e-08 7.462454572898811 0.08941251098803027 MS(ph)VDAVEIETLRK ddPTM_KYSE-520_SHP099_60min_R1 2 MSVDAVEIETLRK 13 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347;P78347-5 A0A494C1K3 GTF2I General transcription factor II-I 1 MS(1)VDAVEIETLRK;MS(1)VDAVEIETLRK 168.05 4.9137e-07 395100000.0 200353.0 274780.0 221386.0 222080.0 218250.0 243230.0 276560.0 317820.0 391170.0 259660.0 True False 189239.0196961963 261579.15634681136 235656.8957901244 243186.41642921345 235425.03332736713 241711.91134841254 304517.3837654953 316717.5565997456 320143.388593242 257359.61441242317 0.7353096954557041 1.0163955092333419 0.9156716228696248 0.9449284301440671 0.9147706949470887 0.9391990732511166 1.1832368666728768 1.230642023313729 1.243953482461342 1.0 17.97342615403209 -6.74478317675455 5.362472931800019 1.1853041020652526 0.9160686929185776 0.6463045131174879 0.09139777404082 0.1013454898131581 8.410714945557645 0.034944647753674105 0.025501810018028283 1.799769232805375e-07 6.74478317675455 -0.269235409146675 MSAQESTPIMNGVTGPDGEDYS(ph)PWADRK ddPTM_KYSE-520_SHP099_60min_R1 2 MSAQESTPIMNGVTGPDGEDYSPWADRK 28 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;Q9UQB8-6;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 MSAQESTPIMNGVTGPDGEDYS(1)PWADRK;MSAQESTPIMNGVTGPDGEDYS(1)PWADRK 251.8 1.2322e-31 2081600000.0 716650.0 626000.0 594060.0 492690.0 490600.0 499510.0 464890.0 591780.0 641970.0 547580.0 True False 676895.995893644 595926.020354844 632354.0581296071 539515.1094673502 529207.4288678407 496392.37280617387 511885.6180891713 589727.253302491 525404.4307467432 542728.8672107942 1.2472083885501888 1.098017917155286 1.1651380575708399 0.9940785207170566 0.9750862002007682 0.9146231254608695 0.9431700597019405 1.0865964368787533 0.9680790215691213 1.0 19.04987212067796 -5.27815836666198 4.8004420886195485 0.9807669457829457 1.1644746717138315 0.7176580359256914 0.053747746376895014 0.10586246244689951 6.933641544517155 0.015618278737017297 0.025035125399454863 5.27037640671411e-06 5.27815836666198 0.1837077259308858 MSCFSRPS(ph)MS(ph)PTPLDR ddPTM_KYSE-520_SHP099_60min_R1 16 MSCFSRPSMSPTPLDR 16 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 MS(0.147)CFS(0.101)RPS(0.82)MS(0.785)PT(0.147)PLDR;MSCFSRPS(0.999)MS(0.646)PT(0.354)PLDR;MSCFSRPS(1)MS(0.694)PT(0.306)PLDR;MSCFS(0.009)RPS(0.991)MS(0.985)PT(0.015)PLDR;MSCFS(0.001)RPS(0.999)MS(0.639)PT(0.361)PLDR;MSCFS(0.424)RPS(0.576)MS(0.88)PT(0.119)PLDR;MS(0.018)CFS(0.026)RPS(0.956)MS(0.961)PT(0.039)PLDR;MSCFS(0.196)RPS(0.804)MS(0.865)PT(0.135)PLDR;MSCFS(0.013)RPS(0.987)MS(0.739)PT(0.261)PLDR;MSCFS(0.001)RPS(0.998)MS(0.859)PT(0.143)PLDR;MS(0.018)CFS(0.45)RPS(0.535)MS(0.896)PT(0.102)PLDR;MSCFS(0.002)RPS(0.997)MS(0.907)PT(0.094)PLDR;MSCFSRPS(0.998)MS(0.758)PT(0.244)PLDR;MS(0.004)CFS(0.007)RPS(0.99)MS(0.815)PT(0.184)PLDR;MS(0.046)CFS(0.386)RPS(0.569)MS(0.594)PT(0.406)PLDR;MSCFS(0.017)RPS(0.974)MS(0.616)PT(0.393)PLDR 268.6 5.834299999999999e-29 42064730000.0 17084850.0 16595100.0 15935470.0 15092160.0 15587690.0 15898260.0 14648860.0 15048190.0 19923610.0 15265820.0 True False 16137119.312695893 15797846.486247055 16962695.893853478 16526514.348776631 16814352.521176007 15799033.062179906 16129709.727896368 14995991.341163935 16305984.657336209 15130576.711428257 1.0665237433089636 1.0441007495976544 1.1210872009287924 1.0922593807210277 1.111282989529142 1.0441791719840234 1.0660340339647105 0.9911050733338758 1.0776842792132408 1.0 23.850963642041197 -6.716094440953925 1.7970595668436584 1.0276965577163353 1.0858379552916297 0.3925113133172724 0.031778019524005344 0.3724770169003371 2.4627347876646444 0.016229299521921935 0.010496228142159794 1.9226735820556138e-07 6.716094440953925 0.05814139757529446 MSCFSRPS(ph)MSPT(ph)PLDR ddPTM_KYSE-520_SHP099_60min_R1 2 MSCFSRPSMSPTPLDR 16 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 MSCFS(0.073)RPS(0.924)MS(0.076)PT(0.927)PLDR;MS(0.002)CFS(0.016)RPS(0.979)MS(0.192)PT(0.812)PLDR 174.15 1.0177e-08 2416250000.0 1336250.0 1262110.0 1222600.0 1252950.0 1259530.0 1178890.0 1148010.0 1163050.0 1597530.0 1169110.0 True False 1262125.5487516655 1201476.3411342662 1301410.7522291648 1372029.991286846 1358647.8452546096 1171532.1102229587 1264062.0542978973 1159015.6510079112 1307458.8224540784 1158752.594953818 1.0892105478322294 1.0368704642962643 1.1231135601306097 1.1840577507759784 1.172508999048894 1.0110286831932833 1.0908817462870721 1.0002270165825204 1.1283330265216684 1.0 20.14414113900373 -6.268649711534552 24.992396786570843 1.0489075122393299 1.1200736526313393 0.3262310113146998 0.053846788916360015 804.017163464514 2786870.7333174245 0.01964504183275429 0.01768633666801913 5.387041093695919e-07 6.268649711534552 0.07116614039200941 MSCFSRPSMS(ph)PTPLDR ddPTM_KYSE-520_SHP099_60min_R1 4 MSCFSRPSMSPTPLDR 16 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 MSCFSRPSMS(0.989)PT(0.011)PLDR;MSCFSRPS(0.082)MS(0.757)PT(0.161)PLDR;MSCFSRPS(0.011)MS(0.855)PT(0.134)PLDR;MSCFS(0.001)RPS(0.185)MS(0.629)PT(0.185)PLDR 189.51 2.5424e-12 2833160000.0 2985280.0 3175270.0 2821020.0 2205783.0 2675650.0 2481880.0 2152666.0 2333703.0 3241570.0 2470227.0 True False 2819680.5673918594 3022725.2630225597 3002867.4629915887 2415419.9531271593 2886208.432633996 2466389.666313357 2370278.487275579 2325607.9289833726 2652982.601329842 2448342.710587524 1.1516690678958201 1.2346005524272385 1.226489841477706 0.986553043690332 1.1788416793747793 1.0073710905126931 0.9681154835986128 0.9498702607795055 1.0835830253082548 1.0 21.223374084977035 -5.625846458928164 0.9082591218530262 0.9965305596395715 1.2136226595619117 0.5462804037574345 0.0706856117352591 0.46211935943026156 0.8000255925328668 0.033378590556256645 0.06407887294053194 2.3667562958854445e-06 5.625846458928164 0.21709209992234024 MSDS(ph)ADKPIDNDAEGVWSPDIEQSFQEALAIYPPCGR ddPTM_KYSE-520_SHP099_60min_R1 1 MSDSADKPIDNDAEGVWSPDIEQSFQEALAIYPPCGR 37 1 H0YCZ6;H0YEJ9;H0YE88;P28347-2;P28347 H0YCZ6 TEAD1 Transcriptional enhancer factor TEF-1 1 MS(0.479)DS(0.518)ADKPIDNDAEGVWS(0.002)PDIEQS(0.001)FQEALAIYPPCGR 54.287 0.037547000000000004 31343000.0 77561.0 73967.0 67948.0 70869.0 67306.0 63222.0 66061.0 70402.0 98889.0 63493.0 True False 73258.53671597967 70413.51429326953 72328.03680064387 77604.36845245825 72602.59928124525 62827.40804698988 72739.09057322968 70157.79189395039 80933.25038882605 62930.50141680654 1.1641181154869182 1.118909157054079 1.149331964186886 1.233175752699991 1.1536949117944837 0.9983617901097936 1.1558638328885715 1.1148455886164874 1.2860735027801893 1.0 15.941471817591438 -6.019885071114936 24.923941909104023 1.1160111303135274 1.1657323080479085 0.09717341508382504 0.08051295493143498 2063.274691446083 2586106.0105223497 0.026313082874649292 0.026659461743622628 9.55245342530214e-07 6.019885071114936 0.04972117773438112 MSDT(ph)GSPGMQR ddPTM_KYSE-520_SHP099_60min_R1 3 MSDTGSPGMQR 11 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 MSDT(0.5)GS(0.5)PGMQR;MS(0.013)DT(0.493)GS(0.493)PGMQR;MS(0.001)DT(0.607)GS(0.391)PGMQR 126.76 0.0037784 1416280000.0 5421610.0 4525970.0 4473030.0 4232140.0 4546160.0 4605520.0 4456550.0 4670860.0 5377200.0 4671770.0 True False 5120862.4855884155 4308535.60758053 4761368.670901053 4634361.31316071 4903916.927887943 4576775.2413491 4907061.565736623 4654657.876846919 4400836.028181051 4630381.752382057 1.1059266296896655 0.930492524804039 1.0282885786796327 1.0008594455039492 1.0590740008348487 0.9884228744195056 1.059753132279478 1.0052427911483484 0.950426177262184 1.0 22.14269971087975 -7.54110837513875 14.55083144653946 0.9760764437305812 1.021092173235928 0.15191967582091437 0.04593601878456987 4.0114661746319005 3188.1072555309374 0.028597915162120537 0.010873763188632925 2.8766804697464606e-08 7.54110837513875 0.04501572950534671 MSDTGS(ph)PGMQR ddPTM_KYSE-520_SHP099_60min_R1 1 MSDTGSPGMQR 11 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4;A0A0U1RQL3 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 MSDT(0.217)GS(0.783)PGMQR 121.71 0.00021674 301180000.0 955840.0 892630.0 772720.0 832110.0 843720.0 862770.0 826650.0 839760.0 931930.0 878220.0 True False 902817.6497801987 849746.7149350538 822530.7675957145 911193.484217005 910115.9638898798 857385.1324017189 910215.8493265362 836847.0685614583 762715.0040435103 870439.6540448202 1.0371972894214114 0.9762270261773932 0.9449601287964314 1.0468198225836873 1.0455819190459543 0.9850023817476161 1.04569667190239 0.9614073355605278 0.8762411047098699 1.0 19.731384756427964 -7.514409584642724 24.075791224298477 0.9316884338427899 1.0089339705007456 0.33587728978761444 0.042900717103407114 264.78295636733037 752733.1391490678 0.026107156161099397 0.010923782973799045 3.059077046576803e-08 7.514409584642724 0.07724553665795575 MSES(ph)PTPCSGSSFEETEALVNTAAK ddPTM_KYSE-520_SHP099_60min_R1 2 MSESPTPCSGSSFEETEALVNTAAK 25 0 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;H0Y911;Q4VXL4;O95359-2 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 1 MS(0.087)ES(0.522)PT(0.379)PCS(0.006)GS(0.006)S(0.001)FEETEALVNTAAK;MS(0.15)ES(0.634)PT(0.15)PCS(0.021)GS(0.021)S(0.025)FEET(0.001)EALVNTAAK 180.42 3.4491000000000004e-11 394980000.0 153415.0 202440.0 142372.0 106775.0 125999.0 203066.0 128946.0 168315.0 219042.0 202087.0 True False 144904.7641247797 192714.47853136505 151549.52692325407 116922.86389692574 135914.40446375683 201798.58977049217 141981.1200716865 167731.15455001654 179269.49439947048 200296.6664013067 0.7234507030409287 0.9621452118691268 0.7566253080798423 0.5837484267594528 0.6785654844172192 1.0074984940896434 0.7088541343330128 0.8374136103391598 0.8950198603919499 1.0 17.61177888457233 -6.237930711235673 24.98926375441551 0.8682891580076258 0.7453402450228442 0.27175658762869237 0.11916209369877422 1391.6398192345205 1479287.373155104 0.04145365314153708 0.04143179828087695 5.781882861007135e-07 6.237930711235673 -0.12294891298478161 MSILERLEQMER ddPTM_KYSE-520_SHP099_60min_R1 1 MSILERLEQMER 12 1 Q9Y6Y1-2;Q9Y6Y1 Q9Y6Y1-2 CAMTA1 Calmodulin-binding transcription activator 1 0 83.99799999999999 0.0042805 84194000.0 203020.0 257260.0 260330.0 158680.0 172810.0 272220.0 176960.0 195640.0 271720.0 293930.0 False True 191758.07588966354 244900.84344486755 277111.28834272723 173760.89949111856 186409.1638456004 270520.9740051182 194848.8437631691 194961.3705027192 222382.4975037851 291326.00887407945 0.6582250470212826 0.8406418788056841 0.9512068263788411 0.5964482888523134 0.6398644754240685 0.9285850413790075 0.6688343567957542 0.6692206138964675 0.7633458418740293 1.0 18.152274981952246 -8.055293412232439 21.19201095796285 1.0000000012382948 0.7474133527180884 0.29712004955418647 0.11732307835702124 3800.902830509847 1456751.5666936955 0.1159468944560707 0.029937359466200103 8.804538315754416e-09 8.055293412232439 -0.2525866485202064 MSILGKGS(ph)MR ddPTM_KYSE-520_SHP099_60min_R1 1 MSILGKGSMR 10 1 E5RG12;H0YAQ1;H0YAQ3;E5RJZ9;O75525-2;O75525;Q5VWX1 E5RG12 KHDRBS3;KHDRBS2 KH domain-containing, RNA-binding, signal transduction-associated protein 3;KH domain-containing, RNA-binding, signal transduction-associated protein 2 1 MSILGKGS(1)MR 61.65 0.031104000000000003 627020000.0 609370.0 535750.0 683940.0 569380.0 460770.0 588470.0 596780.0 455920.0 699670.0 573200.0 True False 575567.0313510217 510011.76582285535 728027.8667426924 623493.7040096603 497029.977577324 584797.1404481364 657108.3464115286 454338.51993252756 572627.565245375 568121.8939428525 1.0131048239603984 0.8977153868922318 1.2814641972166714 1.0974646649903228 0.8748650296292232 1.0293515294570943 1.1566326758701317 0.7997201388936959 1.0079308179293223 1.0 19.115840976209135 -7.255891075972995 24.995438918738827 0.9278691105831041 1.0474098314467906 0.15243419827644733 0.12285542378702254 845.8881371686934 3810794.467113033 0.061093774414658644 0.033985090131427 5.547648343263983e-08 7.255891075972995 0.1195407208636865 MSMTGAGKS(ph)PPSVQSLAMR ddPTM_KYSE-520_SHP099_60min_R1 2 MSMTGAGKSPPSVQSLAMR 19 1 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7-2;Q96KQ7;Q96KQ7-3 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 MSMT(0.009)GAGKS(0.961)PPS(0.012)VQS(0.018)LAMR;MSMTGAGKS(0.986)PPS(0.013)VQSLAMR 145.61 1.4004e-06 2371000000.0 1561040.0 1718980.0 1250550.0 1115570.0 1202730.0 1650120.0 1131930.0 1387530.0 1866080.0 1400600.0 True False 1474445.9993439089 1636397.6205584176 1331162.4539507453 1221593.4373916504 1297378.0084024016 1639820.9889990662 1246356.5309722223 1382716.9822819363 1527246.9120486674 1388191.7736503126 1.0621342290963063 1.1787979525735386 0.9589182699522804 0.879988961596722 0.9345812538500267 1.1812640156245007 0.8978273424678723 0.9960561707162549 1.1001699772594842 1.0 20.40477545408679 -4.7686771700198705 24.9997979460835 0.9905762683360684 1.120466099186436 0.24237631490682787 0.08959143754656354 206.9621854187396 714869.2141716721 0.023850189338971452 0.051313621514594246 1.703424267246349e-05 4.7686771700198705 0.12988983085036754 MSPNETLFLES(ph)TNK ddPTM_KYSE-520_SHP099_60min_R1 6 MSPNETLFLESTNK 14 0 Q9HB90;Q9NQL2 Q9HB90 RRAGC;RRAGD Ras-related GTP-binding protein C;Ras-related GTP-binding protein D 1 MSPNETLFLES(0.754)T(0.246)NK;MSPNETLFLES(0.974)T(0.026)NK;MSPNETLFLES(0.98)T(0.02)NK;MSPNETLFLES(0.952)T(0.048)NK;MSPNETLFLES(0.928)T(0.072)NK;MSPNETLFLES(0.936)T(0.064)NK 326.05 4.5116999999999996e-43 3020660000.0 3140450.0 3508170.0 3000340.0 2629090.0 2708440.0 2838900.0 2962930.0 3333930.0 3685880.0 3877590.0 True False 2966242.9781681327 3339632.2473294768 3193746.7171137333 2878957.92313527 2921578.819084417 2821181.3720635124 3262451.8798101647 3322365.374975115 3016617.1054734746 3843237.5693193697 0.7718083841206436 0.8689632600362301 0.8310042404376631 0.7490970493518381 0.7601868909711516 0.7340637473428785 0.8488811375737927 0.8644704666444807 0.7849155955268495 1.0 21.87389072852101 -9.40206221861294 0.5651396134811414 1.0251520553513798 0.7956286521565934 0.6228596499086839 0.046468666902622524 6.251349606102315 1.7698906322309382 0.37899996287815313 0.021930685485842445 3.9622126608407944e-10 9.40206221861294 -0.22952340319478637 MSPS(ph)KSPFLPSMK ddPTM_KYSE-520_SHP099_60min_R1 1 MSPSKSPFLPSMK 13 1 A0A1B0GV63;A0A1B0GWJ2;A0A1B0GTJ8;A0A1B0GVK1;H0Y7H8;A0A3F2YNW7;Q8NFD5-4;Q8NFD5;Q8NFD5-2;Q8NFD5-3 A0A1B0GV63 ARID1B AT-rich interactive domain-containing protein 1B 1 MS(0.142)PS(0.814)KS(0.044)PFLPSMK 67.952 0.019315 103280000.0 480880.0 479930.0 374330.0 410650.0 419960.0 413130.0 330650.0 367540.0 453970.0 348240.0 True False 454204.62778948626 456873.44241038384 398459.9107491763 449678.0525335759 453008.4627544605 410551.5024272076 364075.3288330239 366265.089524481 371540.4916524116 345154.86452662054 1.315944448334597 1.323676672026585 1.1544380557859544 1.3028298272727774 1.3124788589486087 1.1894704221836145 1.0548173189804315 1.0611616035799265 1.0764457634458633 1.0 18.396884291847527 -6.6097042900775245 2.9393119818915707 1.0512123176776298 1.277704539903772 0.8321080371948459 0.04941034980784741 0.10968731123828426 1.9144251592771204 0.02143208212344809 0.016054215199117417 2.4563808894147725e-07 6.6097042900775245 0.2264922222261423 MSQPGS(ph)PSPK ddPTM_KYSE-520_SHP099_60min_R1 18 MSQPGSPSPK 10 0 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 MSQPGS(0.837)PS(0.163)PK;MSQPGS(0.734)PS(0.266)PK;MSQPGS(0.981)PS(0.019)PK;MSQPGS(0.996)PS(0.004)PK;MSQPGS(0.996)PS(0.004)PK;MSQPGS(0.985)PS(0.015)PK;MSQPGS(0.977)PS(0.023)PK;MSQPGS(0.995)PS(0.005)PK;MSQPGS(0.996)PS(0.004)PK;MSQPGS(0.771)PS(0.229)PK;MSQPGS(0.959)PS(0.041)PK;MS(0.009)QPGS(0.592)PS(0.399)PK;MS(0.034)QPGS(0.486)PS(0.481)PK;MSQPGS(0.999)PS(0.001)PK;MSQPGS(0.999)PS(0.001)PK;MSQPGS(0.908)PS(0.092)PK;MS(0.003)QPGS(0.997)PSPK;MS(0.004)QPGS(0.81)PS(0.187)PK 211.52 5.3075000000000005e-09 127706090000.0 224225200.0 221940670.0 192634010.0 161920180.0 170241770.0 209083410.0 181220600.0 214204060.0 235863700.0 217131800.0 True False 211786981.1741453 211278307.0734627 205051506.5099134 177309025.22412264 183638828.75583017 207778442.88263708 199540146.79061818 213461036.1114637 193036797.7200191 215208181.177984 0.9841028348220218 0.9817391974458853 0.9528053505564889 0.8238953754155027 0.8533078424372493 0.9654765062616171 0.9271959165232299 0.9918816047932891 0.8969770417806354 1.0 27.681157682349188 MSQPGSPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 MSQPGSPSPK 10 0 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 MSQPGS(0.224)PS(0.776)PK 174.23 6.1078e-07 3783600000.0 2211300.0 2099300.0 1883300.0 1501700.0 1640900.0 1914900.0 1805900.0 2082400.0 2183900.0 2016100.0 True False 2088634.7808827374 1998446.4768864585 2004700.531386539 1644421.1164974303 1770029.4945561355 1902948.3988039114 1988457.995885555 2075176.6404358149 1787358.8116388826 1998238.9225020641 1.0452377627933929 1.0001038686525705 1.0032336517979463 0.8229351845666151 0.8857947238560544 0.9523127476774218 0.9951052266541469 1.0385027621408827 0.8944670186890709 1.0 20.93029766081348 -9.593557537356862 14.202626223092944 0.9999999827859681 0.959149029583239 0.0301668606906772 0.06840135141202172 0.0 0.0 0.07117863805050301 0.017263355468813663 2.549426305546497e-10 9.593557537356862 -0.040850953202729134 MSS(ph)PLADAK ddPTM_KYSE-520_SHP099_60min_R1 4 MSSPLADAK 9 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 MSS(1)PLADAK;MSS(1)PLADAK;MSS(1)PLADAK;MS(0.028)S(0.972)PLADAK 198.02 2.7397000000000002e-06 4804690000.0 12904800.0 13080600.0 10850400.0 9981100.0 10432200.0 11530700.0 10764600.0 12213400.0 14238800.0 11929400.0 True False 12188945.01891897 12452188.341619125 11549834.145253826 10929700.74307287 11253154.788901536 11458732.624204017 11852790.82037191 12171034.56602898 11653392.850938087 11823714.79693276 1.030889633948288 1.0531536454896053 0.9768363279745226 0.9243880566121393 0.951744437528277 0.9691313450132081 1.002459127604016 1.0293748432756784 0.9855948871467318 1.0 23.4951800395852 -9.836873329025376 13.951234343337461 0.999999999925428 0.9905236675669072 0.004069050724443857 0.03708208430130397 0.0 0.0 0.040713649868018606 0.00987451051825031 1.4558836572630182e-10 9.836873329025376 -0.009476332358520745 MSSEGPPRMS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 MSSEGPPRMSPK 12 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 MS(0.002)S(0.002)EGPPRMS(0.996)PK;MS(0.005)S(0.005)EGPPRMS(0.99)PK;MSS(0.003)EGPPRMS(0.997)PK;MSSEGPPRMS(1)PK;MSSEGPPRMS(1)PK;MSSEGPPRMS(1)PK;MSSEGPPRMS(1)PK;MSSEGPPRMS(1)PK 191.57 1.2134e-07 14940150000.0 20057810.0 17343580.0 16001620.0 14042180.0 15453890.0 14420230.0 12539770.0 12881630.0 17578740.0 12943490.0 True False 18945163.295047056 16510368.38355566 17033110.02869724 15376744.56526465 16670023.22239387 14330227.995657291 13807412.32796155 12836946.63212505 14386883.939973814 12828820.748482851 1.476765765652118 1.286974750622203 1.3277221938510282 1.198609355196043 1.299419763454508 1.1170339251448345 1.0762807118958637 1.0006334084637638 1.12145022695677 1.0 23.612885225246547 -4.917580277843988 0.319535012965292 0.9859218298300777 1.6419701913547224 0.8406067890978606 0.05888841284647156 1.7993678687988626 0.20501011560868931 0.06614186671577792 0.4445058385964861 1.2089816861734486e-05 4.917580277843988 0.6560483615246447 MSSPEDDS(ph)DTKR ddPTM_KYSE-520_SHP099_60min_R1 1 MSSPEDDSDTKR 12 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 MS(0.014)S(0.088)PEDDS(0.892)DT(0.006)KR 116.98 0.00015346 242320000.0 335720.0 316010.0 301190.0 296400.0 334560.0 289680.0 306340.0 319280.0 384960.0 264590.0 True False 317096.94235877175 300828.4052593196 320605.189321039 324569.76688409026 360887.9686139925 287871.99966865993 337307.83679028763 318172.4922005124 315060.96805188095 262245.9384479049 1.209158640303453 1.1471232196760184 1.2225363382881416 1.237654122710335 1.3761432140756789 1.097717666753667 1.286227114847362 1.2132599424937034 1.2013950336716759 1.0 18.00056090357323 -8.450163360814708 1.9747919136204897 1.0000165138738137 1.224525149476555 0.4741214679788178 0.07027046315496885 2.9774251535043894 12.003519232010891 0.0664845649950663 0.01841730099268738 3.5467995050309175e-09 8.450163360814708 0.22450863560274126 MST(ph)SQNS(ph)IPFEHHGK ddPTM_KYSE-520_SHP099_60min_R1 1 MSTSQNSIPFEHHGK 15 0 P48730-2 P48730-2 CSNK1D Casein kinase I isoform delta 2 MS(0.098)T(0.776)S(0.127)QNS(0.999)IPFEHHGK 122.64 0.00013369 417980000.0 1256000.0 1164600.0 1085200.0 1225100.0 1188800.0 1171300.0 1090700.0 1271900.0 1389300.0 1181600.0 True False 1186327.1762260734 1108650.8678997618 1155153.728381392 1341533.135660254 1282351.796653261 1163989.4822283245 1200958.6002061993 1267488.0757636921 1137038.1414029477 1171131.94327089 1.0129748258020732 0.9466489871357936 0.986356605691352 1.1455012762383077 1.0949678249503993 0.9939012328340928 1.025468229354248 1.0822760689318116 0.9708881633159789 1.0 20.159472192711778 -5.032300875906427 24.788947242776324 1.048749221732373 0.9764845704436281 0.23305949056895514 0.05179962076583709 740.1848688042589 568046.2694634501 0.01430844844190687 0.02481248290345599 9.283230288311789e-06 5.032300875906427 -0.07226465128874493 MSTSQNS(ph)IPFEHHGK ddPTM_KYSE-520_SHP099_60min_R1 1 MSTSQNSIPFEHHGK 15 0 P48730-2 P48730-2 CSNK1D Casein kinase I isoform delta 1 MS(0.048)T(0.008)S(0.005)QNS(0.94)IPFEHHGK 131.67 2.2978000000000003e-05 370990000.0 139310.0 160180.0 122800.0 141060.0 126890.0 110520.0 105660.0 110860.0 140520.0 130460.0 True False 131582.19659239988 152484.71236491812 130715.88448694715 154466.29998876437 136875.52109466022 109830.20368468745 116341.14394222696 110475.4525349185 115005.11022093309 129304.22589634401 1.0176171403545773 1.1792709117423323 1.0109173430397764 1.194595914541814 1.0585541202990976 0.8493937682495559 0.8997474222960908 0.8543839288244184 0.8894149392543927 1.0 16.980409900242925 -6.162011961428421 4.807151663450357 0.8899866601705718 1.1022479240881704 0.673736994111173 0.06754047127676521 0.12005827809690439 4.491805762616159 0.020995793076434965 0.020986635375509762 6.886333296015296e-07 6.162011961428421 0.21226126391759859 MSVQPTVS(ph)LGGFEITPPVVLR ddPTM_KYSE-520_SHP099_60min_R1 2 MSVQPTVSLGGFEITPPVVLR 21 0 P06748;P06748-3;P06748-2;E5RI98 P06748;E5RI98 NPM1 Nucleophosmin 1 MSVQPTVS(1)LGGFEITPPVVLR;MSVQPT(0.027)VS(0.973)LGGFEITPPVVLR 180.52 6.6721e-10 94885000.0 46605.0 74305.0 57301.0 62769.0 54040.0 64569.0 49789.0 69771.0 76776.0 69731.0 True False 44019.72774523585 70735.27626592111 60994.71414484163 68734.54688781204 58292.64055446009 64166.00092034554 54822.158013813496 69528.98068567374 62835.41376545936 69113.23758989708 0.6369218008052139 1.0234692908708583 0.8825330178680241 0.9945207211340308 0.8434366929871806 0.9284183921623327 0.7932222527197504 1.0060153902533635 0.9091661157347459 1.0 16.07667444293048 -4.248956716948463 24.891192270696695 0.9247028766895092 0.63692161079161 0.5948022029157601 0.07268807765728497 1302.579322246176 2597375.9502622066 0.017065079575671948 0.2933096947172403 5.636938323938096e-05 4.248956716948463 -0.2877812658978992 MSYLTAMGADYLS(ph)CDSR ddPTM_KYSE-520_SHP099_60min_R1 2 MSYLTAMGADYLSCDSR 17 0 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 MSYLTAMGADYLS(0.972)CDS(0.028)R;MSYLTAMGADYLS(0.999)CDS(0.001)R 206.62 1.7019e-13 350350000.0 347920.0 381180.0 336850.0 416160.0 323440.0 304000.0 326310.0 380050.0 406500.0 344420.0 True False 328620.18403867504 362867.5406371557 358563.88997905585 455711.7212769331 348892.887878138 302102.623236926 359296.5992787059 378731.6952543373 332689.8470310936 341368.7067547057 0.9626546825652907 1.0629783382514268 1.0503712932208105 1.3349545879856817 1.02204121518625 0.8849745663828676 1.0525176800604705 1.1094505376747352 0.9745762878908277 1.0 18.380971287111105 -5.969549994381544 24.999882963554985 1.007418667273994 1.1064513382606618 0.1714546363338849 0.10319725112676083 383.7447077469462 315058.2159761678 0.03349690648970186 0.03798148682231298 1.0726301634934845e-06 5.969549994381544 0.09903267098666779 MT(ph)GSEFDFEEMK ddPTM_KYSE-520_SHP099_60min_R1 1 MTGSEFDFEEMK 12 0 P50395-2;P50395 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 1 MT(0.998)GS(0.002)EFDFEEMK 100.19 0.006746500000000001 18265000.0 45980.0 45273.0 40862.0 41020.0 43031.0 50247.0 44438.0 48625.0 47491.0 45265.0 True False 43429.397741142406 43098.01712384159 43496.02990151161 44918.52846688728 46417.2948871016 49933.3898348217 48930.226713086086 48456.33122416034 38867.831550685485 44863.98731563713 0.9680235828259807 0.9606372438684241 0.9695087865351476 1.0012157000416932 1.0346225929616173 1.1129949169145215 1.0906348196124709 1.0800718822259276 0.8663481307899328 1.0 15.45327022611855 -5.5355539591067675 2.541137352077409 1.041884362266381 0.9655118405838332 0.15670278850509356 0.06444701024601097 0.47170461303835903 6.13319561905751 0.020688968656939453 0.030434834419466806 2.913708097350871e-06 5.5355539591067675 -0.07637252168254771 MT(ph)MGDKK ddPTM_KYSE-520_SHP099_60min_R1 1 MTMGDKK 7 1 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 MT(1)MGDKK 47.907 0.057734 0.0 401180.0 408380.0 368410.0 512790.0 370520.0 327640.0 313870.0 350330.0 471960.0 341430.0 True False 378925.74566749745 388760.8118091225 392158.29807684186 561525.4074240642 399677.8160295813 325595.0772281126 345599.042676006 349114.7869976371 386263.9611434067 338405.19582852063 1.119739739042038 1.1488027270305816 1.1588424259170047 1.6593285633492603 1.181062882474503 0.9621456208169473 1.0212580862710237 1.031647242126103 1.141424440005163 1.0 18.368392194013154 -6.00733964450224 24.99295627258748 1.036974420359591 1.2755110324088743 0.37179417487877886 0.14812116556330482 402.3210660685143 1369988.729827034 0.049670020623947 0.05408220315500807 9.83241850515095e-07 6.00733964450224 0.23853661204928334 MTDQEAIQDLWQWR ddPTM_KYSE-520_SHP099_60min_R1 10 MTDQEAIQDLWQWR 14 0 P06748;P06748-2 P06748 NPM1 Nucleophosmin 0 ;;;;;;;;; 264.3 7.537099999999999e-24 6321793000.0 2574005.0 2938838.0 1817229.0 1895777.0 3056407.0 2941918.0 2373214.0 2049191.0 2122391.0 2432738.0 False True 2431219.8114982448 2797651.8111942294 1934370.4890092036 2075951.076093859 3296928.842323012 2923556.398512926 2613121.631456635 2042082.8347057737 1737018.2955231713 2411185.833961527 1.008308765444181 1.1602804610865465 0.802248612182278 0.8609668516022739 1.367347466912672 1.2124973352674295 1.083749578589441 0.8469205508522233 0.7204000086004517 1.0 21.2013114153716 -7.268820986710209 10.377589196402694 0.837592008565484 1.0726976824018655 0.2578465904124867 0.1662738704250547 0.3681400531790724 473.53227945078805 0.09312391427899938 0.047675927581299606 5.3849169946493964e-08 7.268820986710209 0.23510567383638148 MTEEEVEMLVAGHEDS(ph)NGCINYEELVR ddPTM_KYSE-520_SHP099_60min_R1 3 MTEEEVEMLVAGHEDSNGCINYEELVR 27 0 G8JLA2;P60660-2;F8VZU9;F8W180;F8VXL3 G8JLA2 MYL6 Myosin light polypeptide 6 1 MTEEEVEMLVAGHEDS(1)NGCINYEELVR;MTEEEVEMLVAGHEDS(1)NGCINYEELVR;MTEEEVEMLVAGHEDS(1)NGCINYEELVR 207.99 2.5786e-22 417330000.0 357676.0 378598.0 331819.0 336292.0 337493.0 333659.0 307906.0 364999.0 411739.0 326179.0 True False 337834.9992705711 360409.5837928164 353208.58366917126 368253.09057012375 364051.7790275051 331576.51041647856 339032.14335297473 363732.9036604068 336977.5766955356 323289.3078234217 1.0449928008602565 1.1148206113567773 1.092546444072599 1.1390821832290876 1.1260866667027154 1.0256340138461468 1.0486958125387544 1.1251003199248244 1.0423406173382954 1.0 18.30246626830598 -6.25428027481848 24.888707398527657 1.0561942762388448 1.1055019643257236 0.33331251859759925 0.038151440598997347 745.0074639319553 2590029.255997859 0.01285691251543955 0.012609127191518401 5.568262814257026e-07 6.25428027481848 0.0493076880868788 MTGS(ph)PTLVK ddPTM_KYSE-520_SHP099_60min_R1 4 MTGSPTLVK 9 0 B7ZBM3;Q8IVH2-3;Q8IVH2-2;Q8IVH2 B7ZBM3 FOXP4 Forkhead box protein P4 1 MTGS(0.925)PT(0.075)LVK;MT(0.002)GS(0.894)PT(0.104)LVK;MT(0.227)GS(0.754)PT(0.019)LVK;MTGS(0.671)PT(0.328)LVK 138.65 0.0004406000000000001 1559890000.0 2804590.0 2662170.0 2200810.0 2500340.0 2306220.0 3151160.0 2651580.0 3156650.0 3502800.0 3456540.0 True False 2649013.8018884435 2534275.357201361 2342677.7340205023 2737971.561845368 2487706.393403166 3131492.4415765502 2919627.5833269916 3145700.3179176482 2866779.8184022503 3425917.74474743 0.7732274967634221 0.7397361950930892 0.6838102688286266 0.7991936076232968 0.7261430596859143 0.9140594360088509 0.8522176540295879 0.9182066098173526 0.8367917831061641 1.0 21.70805908248877 -6.2613309520206455 24.99999983325142 0.8958906736891485 0.7438373270403725 0.7181448623705182 0.04992807368352296 5.384961174792266 1241683.198604105 0.016087843247580582 0.015123280649239451 5.478593122526823e-07 6.2613309520206455 -0.152053346648776 MTGSAPPPS(ph)PTPNK ddPTM_KYSE-520_SHP099_60min_R1 5 MTGSAPPPSPTPNK 14 0 Q9UBW7 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 MTGSAPPPS(0.99)PT(0.01)PNK;MTGSAPPPS(0.95)PT(0.05)PNK;MTGSAPPPS(1)PTPNK;MTGSAPPPS(0.952)PT(0.048)PNK;MTGSAPPPS(0.946)PT(0.054)PNK 257.54 1.395e-24 4243420000.0 5840700.0 7441170.0 4751130.0 4376130.0 4609300.0 7277690.0 5244050.0 7123150.0 7605160.0 7324890.0 True False 5516704.727853217 7083685.023776113 5057395.441876783 4792036.079468538 4972025.686670482 7232267.237187974 5774169.750995975 7098441.455205712 6224254.654482143 7259997.1732781865 0.7598769801396766 0.9757145705027236 0.6966112136367626 0.6600603230406958 0.6848522896084557 0.9961804480871869 0.795340495757893 0.9777471376067319 0.8573356856655134 1.0 22.791537555823666 -6.260079460849469 24.998300762324376 0.9158061834890395 0.7590962354395356 0.4138631523509714 0.10072976925231125 145.0740183225133 2666799.9009964066 0.035682393010918266 0.03383460562812962 5.494403361074464e-07 6.260079460849469 -0.1567099480495039 MTGSEFDFEEMKR ddPTM_KYSE-520_SHP099_60min_R1 2 MTGSEFDFEEMKR 13 1 P50395-2;P50395 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 0 ; 188.09 6.700300000000001e-08 228210000.0 506850.0 430160.0 249680.0 278282.0 489870.0 423810.0 330910.0 332160.0 338480.0 379730.0 False True 478734.02011957485 409494.4679166767 265774.7723021248 304729.83761146606 528419.982020973 421164.84458566253 364361.61217037914 331007.8144867264 277020.5643864316 376365.88762546924 1.2719909956238504 1.0880222713599765 0.70616062996284 0.8096638075624698 1.404006046761646 1.1190303330698605 0.9681047729090798 0.8794841014287678 0.7360405751280558 1.0 18.521776348029896 -7.109891489803093 3.217865378582764 0.8552988868650893 1.0540704600166277 0.15919714836202747 0.19812783819778249 0.5382067108506513 10.449743325500698 0.11362256212075995 0.06114948594824855 7.764410892775528e-08 7.109891489803093 0.19877157315153848 MTNNEDS(ph)LS(ph)PTSSTLSNLELDAAEKDR ddPTM_KYSE-520_SHP099_60min_R1 1 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 2 MT(0.005)NNEDS(0.577)LS(0.577)PT(0.577)S(0.179)S(0.065)T(0.018)LS(0.001)NLELDAAEKDR 63.979 0.02195 102030000.0 140640.0 125550.0 126590.0 119640.0 127600.0 121400.0 118550.0 139640.0 154940.0 120280.0 True False 132838.4188411109 119518.38954560796 134750.1939511615 131010.5496289223 137641.39405531273 120642.29756895649 130534.19093650382 139155.6214322209 126806.80171955127 119214.412776424 1.1142815348194308 1.0025498323743292 1.1303179776079044 1.0989489154689787 1.1545700796551077 1.0119774510420176 1.0949531008579394 1.1672717936647046 1.0636868375753032 1.0 16.86319913963363 -8.012265147381216 24.824859997949705 0.9999999933929707 1.0952777516889425 0.2534308971711424 0.050831755223924434 803.64126558681 1626584.6679861697 0.048535558309356415 0.012531827281238687 9.721535191086224e-09 8.012265147381216 0.09527775829597174 MTNNEDS(ph)LSPTSSTLSNLELDAAEKDR ddPTM_KYSE-520_SHP099_60min_R1 1 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MT(0.001)NNEDS(0.731)LS(0.234)PT(0.018)S(0.005)S(0.005)T(0.005)LSNLELDAAEKDR 89.079 0.0015465 67383000.0 268310.0 320120.0 228050.0 209470.0 248560.0 299930.0 232020.0 303520.0 369400.0 288220.0 True False 253426.30943727525 304740.9546900835 242750.4678929011 229377.96582054786 268120.2578870579 298058.0256166156 255474.84589698576 302467.1599621002 302326.2718162014 285666.5950317666 0.8871401621498439 1.0667714041125311 0.8497684787607274 0.802956907842307 0.9385775675214754 1.043377247463852 0.8943112367358756 1.0588117939672481 1.0583186031344762 1.0 18.123972816277487 -6.809033569330664 1.0927137206842166 1.03711165491575 0.9133135388272658 0.2759430141979301 0.07903818913604627 0.7447257621510588 1.7465255971006903 0.06005351900209356 0.03267352141249276 1.5522670209160264e-07 6.809033569330664 -0.12379811608848412 MTNNEDSLS(ph)PTSSTLSNLELDAAEKDR ddPTM_KYSE-520_SHP099_60min_R1 3 MTNNEDSLSPTSSTLSNLELDAAEKDR 27 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 MTNNEDS(0.147)LS(0.551)PT(0.241)S(0.048)S(0.01)T(0.002)LSNLELDAAEKDR;MTNNEDS(0.009)LS(0.602)PT(0.188)S(0.188)S(0.009)T(0.003)LSNLELDAAEKDR;MTNNEDSLS(0.794)PT(0.205)SSTLSNLELDAAEKDR 195.2 1.1503e-15 1497550000.0 1294970.0 1399990.0 991600.0 946570.0 994110.0 1315710.0 1012420.0 1219440.0 1550710.0 1394300.0 True False 1223135.432641306 1332732.3789721692 1055520.1226160962 1036531.7282033523 1072340.8012878303 1307498.1658521558 1114765.2938670204 1215210.047259437 1269140.154217926 1381947.5867489872 0.8850809136102733 0.9643870663050282 0.7637917188300845 0.7500514043674977 0.7759634385342337 0.946127174712919 0.8066624990383974 0.8793459744144146 0.9183706866941032 1.0 20.398271468862756 -7.999148858824672 1.195075241944829 1.0001645297852246 0.8393627879556539 0.3376081128448335 0.06942818201381742 0.6291195436649246 2.023116590642434 0.07099673178571243 0.02235141174159403 1.0019617466945264e-08 7.999148858824672 -0.16080174182957074 MTSLETKTS(ph)DTETEPSK ddPTM_KYSE-520_SHP099_60min_R1 7 MTSLETKTSDTETEPSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 MTSLET(0.004)KT(0.094)S(0.901)DT(0.001)ETEPSK;MTSLET(0.035)KT(0.137)S(0.827)DTETEPSK;MTSLET(0.003)KT(0.127)S(0.87)DTETEPSK;MTSLETKT(0.017)S(0.983)DTETEPSK;MTSLETKT(0.019)S(0.981)DTETEPSK;MTSLETKT(0.02)S(0.979)DTETEPSK;MTSLETKT(0.058)S(0.942)DTETEPSK 225.23 1.3847e-18 5698390000.0 6291610.0 6191640.0 6427760.0 4995350.0 5433880.0 5462650.0 4940720.0 5977430.0 9057390.0 5352800.0 True False 5942601.851286414 5894184.32055888 6842103.694379629 5470106.562093253 5861495.441452069 5428555.5750828665 5440176.194380463 5956695.690472649 7412796.294221298 5305378.356415386 1.120108963407008 1.110982841295663 1.2896542404192528 1.0310492851991742 1.1048213808095728 1.0232174239785428 1.0254077709277938 1.1227654825540718 1.3972229304357855 1.0 22.33902421084306 -10.945408909450743 2.8226775233320804 0.9095996038301453 1.1289290992392065 0.1106511065365281 0.11415133309675503 84969712.0939758 12009745.686920105 49869735.13337539 0.0289196008828572 1.1339426505381175e-11 10.945408909450743 0.21932949540906121 MTSSDKDFR ddPTM_KYSE-520_SHP099_60min_R1 2 MTSSDKDFR 9 1 Q86VP6-2;Q86VP6;O75155-2;O75155;A0A3B3ISC4;F8WBB8 Q86VP6-2 CAND1;CAND2 Cullin-associated NEDD8-dissociated protein 1;Cullin-associated NEDD8-dissociated protein 2 0 ; 66.435 0.030507999999999997 1436910000.0 4337500.0 4175800.0 2498700.0 2709800.0 4206000.0 4428600.0 3052600.0 3725200.0 3407500.0 3614200.0 False True 4096890.228408114 3975188.299996411 2659770.2000613576 2967338.577268923 4536988.271133583 4400959.464694243 3361186.598505032 3712278.150668219 2788783.89608475 3582180.9998050537 1.1436859914758835 1.1097117371268357 0.7425002254788647 0.8283608721698901 1.266543558625455 1.2285698195969852 0.9383073045968228 1.036317860786556 0.7785156295107698 1.0 21.772406804728433 -7.726615815222893 24.13620632945376 0.8892577908765555 1.0331996311824565 0.11364164762728046 0.1645257602671728 264.9310302278445 183624.1962475449 0.11999478758608667 0.04534804954889932 1.8766538960771622e-08 7.726615815222893 0.14394184030590096 MTTTSAAAYGTHLS(ph)PHVPHR ddPTM_KYSE-520_SHP099_60min_R1 12 MTTTSAAAYGTHLSPHVPHR 20 0 P16144-4;P16144-2;P16144-3;P16144;J3QRK0 P16144-4 ITGB4 Integrin beta-4 1 MTTTSAAAYGT(0.006)HLS(0.994)PHVPHR;MTTTSAAAY(0.002)GT(0.056)HLS(0.942)PHVPHR;MTTTSAAAYGTHLS(1)PHVPHR;MTTTSAAAYGTHLS(1)PHVPHR;MTTTSAAAYGTHLS(1)PHVPHR;MTTTSAAAYGTHLS(1)PHVPHR;MTTTSAAAYGTHLS(1)PHVPHR;MTTTSAAAYGTHLS(1)PHVPHR;MTTTSAAAYGT(0.026)HLS(0.974)PHVPHR;MTTTSAAAYGT(0.001)HLS(0.999)PHVPHR;MTTTSAAAYGT(0.005)HLS(0.995)PHVPHR;MTTTSAAAYGTHLS(1)PHVPHR 280.89 1.2561e-36 37002960000.0 3969379.0 4834538.0 4084084.0 7963670.0 4305946.0 4463550.0 4837599.0 4857351.0 6321140.0 4005348.0 True False 3749189.634109136 4602279.5376905175 4347350.589405445 8720534.80243531 4644799.452718634 4435691.3287801985 5326630.717336479 4840501.983095243 5173380.318972016 3969863.7328335945 0.9444126767124709 1.1593041593912645 1.0950881143475446 2.1966836620386463 1.170014833079242 1.1173409535682242 1.341766638809654 1.2193118728637589 1.3031631983195 1.0 21.920658056455828 -9.221003992406196 0.6755047131805091 0.9815535124427687 1.3004677264495343 0.06270010951714533 0.324043025796102 24.39848825888395 10.3853039998648 1.5596890321353554 0.1263547210465448 6.011682110056865e-10 9.221003992406196 0.3189142140067657 MVEGFFDR ddPTM_KYSE-520_SHP099_60min_R1 4 MVEGFFDR 8 0 P00367;P49448 P00367 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial 0 ;;; 134.81 0.0055618 436769000.0 526988.0 567201.0 417806.0 344453.0 600350.0 604314.0 438667.0 442410.0 537018.0 493789.0 False True 497754.9251154665 539951.8125739417 444738.443273236 377189.70955642953 647594.1294757606 600542.2521671031 483011.7413373538 440875.38296927 439509.06832212495 489414.41362202883 1.0170418182654486 1.1032609533869235 0.9087154585044653 0.7706959563469873 1.3232019970214708 1.2270628642149013 0.9869176875333716 0.9008222289704668 0.8980304954025211 1.0 18.900697064932196 -6.996833507097866 24.947146437893828 0.9284297816137783 1.05707466528854 0.1304892681885429 0.14638557149417966 205.63774557564494 1620100.9181656626 0.06741838124502395 0.04518717078571939 1.0073177642819927e-07 6.996833507097866 0.1286448836747618 MVEMQKDPMEPPR ddPTM_KYSE-520_SHP099_60min_R1 1 MVEMQKDPMEPPR 13 1 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 0 41.401 0.063769 1168100000.0 481980.0 537500.0 532530.0 575060.0 503990.0 487960.0 551750.0 568630.0 617990.0 519630.0 False True 455243.60859669006 511677.69319605123 566857.7358781263 629713.5295019061 543651.1456891624 484914.46064042894 607526.2745610797 566657.5552492391 505778.5942601369 515026.4824660224 0.8839227187249029 0.9934978309194186 1.100638035473299 1.22268184441069 1.0555790123375421 0.9415330612099543 1.17960201124446 1.1002493552098516 0.9820438588679843 1.0 18.97428709147075 -4.460153128982186 2.9401320404687565 1.0797503995251947 0.8838464717686799 0.3354920220355304 0.08201767776572826 0.33456863076593873 5.053917748699245 0.02196412464474557 0.12156833990619974 3.4661461518642245e-05 4.460153128982186 -0.19590392775651477 MVEPENAVTITPLRPEDDYS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 MVEPENAVTITPLRPEDDYSPR 22 1 A0A0G2JNZ2;A0A669KB89;Q14160;A0A0G2JMS7;A0A0G2JPP5;Q14160-2;Q14160-3;A0A669KAX5;H0YDF9 A0A0G2JNZ2 SCRIB Protein scribble homolog 1 MVEPENAVTITPLRPEDDY(0.035)S(0.965)PR;MVEPENAVTITPLRPEDDY(0.016)S(0.984)PR;MVEPENAVTITPLRPEDDYS(1)PR;MVEPENAVTITPLRPEDDYS(1)PR;MVEPENAVTITPLRPEDDYS(1)PR;MVEPENAVTITPLRPEDDYS(1)PR;MVEPENAVTITPLRPEDDYS(1)PR;MVEPENAVTITPLRPEDDYS(1)PR 201.17 3.0522000000000005e-14 5918530000.0 2209980.0 2491320.0 2016850.0 2620590.0 2720660.0 2749050.0 2719650.0 3522660.0 4494520.0 2719470.0 True False 2087388.003914091 2371633.2476524445 2146859.3780740974 2869650.0856908886 2934760.4635621305 2731892.159241681 2994578.763226171 3510440.714655026 3678428.4656290053 2695377.6115156445 0.7744324932417639 0.8798890506176037 0.7964967019470387 1.0646560516903785 1.0888123619576546 1.0135470991411493 1.111005281943513 1.3023929187721721 1.3647173033987543 1.0 21.362055972208672 -5.594701061214421 0.6502951868186985 1.2205171432597905 0.7549211004429964 0.6430695677479884 0.11017437509543646 0.6118886429141283 0.51761451752267 0.0716786903185382 0.16830948062046638 2.542722340447545e-06 5.594701061214421 -0.4655960428167941 MVINHLEK ddPTM_KYSE-520_SHP099_60min_R1 2 MVINHLEK 8 0 P50990-2;P50990;H7C4C8 P50990-2 CCT8 T-complex protein 1 subunit theta 0 ; 135.0 0.0012424 1508120000.0 4715500.0 4275100.0 2979800.0 2701300.0 4528200.0 4305300.0 3245100.0 3597100.0 3577900.0 3585800.0 False True 4453921.814883804 4069717.778944078 3171882.675848575 2958030.739824538 4884543.578066366 4278429.025730048 3573146.3771239882 3584622.4996694503 2928243.551519183 3554032.6017101854 1.2532022955390436 1.1450986062946489 0.892474276775705 0.8323026464082367 1.3743665648187764 1.2038237982598377 1.0053780529206753 1.0086070954848712 0.8239214097558151 1.0 21.761025484824103 -7.223729760732746 2.3913731910983635 0.9234292016101733 1.1045993970036017 0.19261759801618594 0.15784219038543398 0.5862481205942974 6.4507438721249155 0.11011757298545756 0.04924931780391898 5.974069067472727e-08 7.223729760732746 0.18117019539342838 MVIQGPS(ph)SPQGEAMVTDVLEDQK ddPTM_KYSE-520_SHP099_60min_R1 3 MVIQGPSSPQGEAMVTDVLEDQK 23 0 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.765)S(0.235)PQGEAMVTDVLEDQK;MVIQGPS(0.5)S(0.5)PQGEAMVTDVLEDQK;MVIQGPS(0.638)S(0.362)PQGEAMVTDVLEDQK 248.03 9.489e-29 1078901000.0 707862.0 863382.0 553237.0 609770.0 603136.0 884989.0 706107.0 950770.0 850034.0 907016.0 True False 668595.4837720875 821903.832757197 588899.5422304976 667722.357465965 650599.3718255897 879465.455380998 777487.186500228 947472.0007813856 695689.2532133542 898980.5438877699 0.7437263112287733 0.9142620920390071 0.6550748469858061 0.7427550707363523 0.7237079559163535 0.978291979020618 0.8648542972219104 1.0539404965138706 0.7738646380540635 1.0 19.777930367106045 -6.2593697321296276 24.993839570257474 0.9332280667281905 0.7583705984314214 0.4750721392111158 0.09368265020048208 167.36641854477338 2021186.8721555094 0.030486735332606853 0.029076296958491114 5.503389715022183e-07 6.2593697321296276 -0.17485746829676907 MVIQGPS(ph)SPQGEAMVTDVLEDQKEGR ddPTM_KYSE-520_SHP099_60min_R1 2 MVIQGPSSPQGEAMVTDVLEDQKEGR 26 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.499)S(0.499)PQGEAMVT(0.001)DVLEDQKEGR;MVIQGPS(0.411)S(0.589)PQGEAMVTDVLEDQKEGR 99.98700000000001 0.0021587 1474190000.0 821170.0 1014910.0 784290.0 551680.0 642510.0 857050.0 631310.0 749940.0 1152530.0 827500.0 True False 775618.0631381889 966152.2001890332 834846.5883083685 604111.50133136 693071.8816181739 851700.8330434443 695128.9757918536 747338.6331773113 943259.6049169655 820168.9937852586 0.9456807914165867 1.1779916182030123 1.017895817367308 0.7365695434830495 0.8450354583870529 1.0384455392694856 0.8475435929169693 0.9112007876915471 1.1500795714839411 1.0 19.64556167852893 -5.010419482200788 24.551060021370414 0.9224351601333141 1.070863105346595 0.16170539234070924 0.1202977637803754 596.2625996199888 1404966.3970296744 0.0320758555765721 0.06080376735172752 9.762937696230485e-06 5.010419482200788 0.14842794521328084 MVIQGPSS(ph)PQGEAMVTDVLEDQK ddPTM_KYSE-520_SHP099_60min_R1 7 MVIQGPSSPQGEAMVTDVLEDQK 23 0 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.213)S(0.787)PQGEAMVTDVLEDQK;MVIQGPS(0.183)S(0.817)PQGEAMVTDVLEDQK;MVIQGPS(0.293)S(0.707)PQGEAMVTDVLEDQK;MVIQGPS(0.181)S(0.819)PQGEAMVTDVLEDQK;MVIQGPS(0.36)S(0.64)PQGEAMVTDVLEDQK;MVIQGPS(0.297)S(0.703)PQGEAMVTDVLEDQK;MVIQGPS(0.322)S(0.678)PQGEAMVTDVLEDQK 262.19 1.5097e-37 1466230000.0 1304074.0 1624713.0 1044715.0 1065812.0 1036203.0 1689675.0 1213259.0 1607834.0 1533189.0 1652057.0 True False 1231734.4156129318 1546659.3487360668 1112059.0005031026 1167106.4520319363 1117746.2809114212 1679129.1115718824 1335907.0599867718 1602256.7991252767 1254800.5261494599 1637421.0602608954 0.7522404868889837 0.9445703284710609 0.6791527405454982 0.712771125495343 0.6826260563262373 1.0254717936169342 0.8158604359063988 0.9785246067801181 0.7663273403540618 1.0 20.642993925613773 -6.251978884946341 24.99527862688811 0.9095586004727095 0.758365357252448 0.3872282375862355 0.1022086601813678 785.85193077648 2076276.1979034608 0.033596501538683564 0.03317998513432597 5.597848171278464e-07 6.251978884946341 -0.1511932432202615 MVIQGPSS(ph)PQGEAMVTDVLEDQKEGR ddPTM_KYSE-520_SHP099_60min_R1 25 MVIQGPSSPQGEAMVTDVLEDQKEGR 26 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 MVIQGPS(0.128)S(0.872)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.247)S(0.753)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.208)S(0.792)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.007)S(0.993)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.153)S(0.847)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.132)S(0.868)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.004)S(0.996)PQGEAMVTDVLEDQKEGR;MVIQGPSS(1)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.398)S(0.602)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.108)S(0.892)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.381)S(0.619)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.159)S(0.841)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.255)S(0.745)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.051)S(0.949)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.099)S(0.901)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.145)S(0.855)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.225)S(0.775)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.022)S(0.978)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.012)S(0.988)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.485)S(0.515)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.168)S(0.832)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.045)S(0.955)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.471)S(0.528)PQGEAMVT(0.001)DVLEDQKEGR;MVIQGPS(0.035)S(0.965)PQGEAMVTDVLEDQKEGR;MVIQGPS(0.257)S(0.743)PQGEAMVT(0.001)DVLEDQKEGR 275.97 8.329000000000001e-39 41530970000.0 18371640.0 20225601.0 16507890.0 11977340.0 13098866.0 15999652.0 11751465.0 13608754.0 22258820.0 16000833.0 True False 17352528.506243642 19253932.768713985 17572015.00295788 13115662.792481413 14129672.23184749 15899792.237098439 12939417.765446167 13561548.408681065 18217179.38718976 15859078.06807969 1.0941700666175476 1.21406381165796 1.1080098683873623 0.8270129408644455 0.8909516789810716 1.0025672469007323 0.8158997458679481 0.8551284223751335 1.1486909459041212 1.0 23.918805569851855 -5.117525254862403 5.549626430140592 0.9250286280437086 1.1555464411423344 0.47717916589563203 0.09834208686882077 0.1776860409586714 7.366394895248323 0.02645750085001621 0.04693260141897131 7.6291252538697855e-06 5.117525254862403 0.23051781309862585 MVIQLRPGRS(ph)PEPDGPAPAFLR ddPTM_KYSE-520_SHP099_60min_R1 3 MVIQLRPGRSPEPDGPAPAFLR 22 2 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 MVIQLRPGRS(1)PEPDGPAPAFLR;MVIQLRPGRS(1)PEPDGPAPAFLR;MVIQLRPGRS(1)PEPDGPAPAFLR 199.85 3.4863e-14 6093890000.0 651000.0 712850.0 715590.0 582850.0 624930.0 628540.0 537490.0 547570.0 776970.0 560590.0 True False 614887.7322636734 678603.6159903354 761718.0763844817 638243.888759758 674108.4356346912 624617.0487149258 591824.7345968917 545670.6074737989 635891.8338198003 555623.6087324206 1.1066623566742526 1.2213369002416525 1.3709246050977524 1.14869828914546 1.2132465666327201 1.1241729813099632 1.0651540454644448 0.9820867920257599 1.1444651088000035 1.0 19.083748375911547 -6.468525833366163 1.7137711544972913 1.0425935582524013 1.2228756561333198 0.5137281145613598 0.07537924671429962 0.2992476443339681 1.761326132684285 0.03534012354028105 0.02760947132125322 3.399962810256722e-07 6.468525833366163 0.18028209788091853 MVISEPGLNWDIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 MVISEPGLNWDISPK 15 0 Q659A1;H0YN09;H0YK14;H0YMX6;H0YL35;H0YK97;H0YNU9;Q659A1-2 Q659A1 ICE2 Little elongation complex subunit 2 1 MVISEPGLNWDIS(1)PK;MVISEPGLNWDIS(1)PK;MVISEPGLNWDIS(1)PK 218.36 4.1864e-14 66098000.0 344357.0 320037.0 315102.0 283444.0 308569.0 285042.0 294424.0 361186.0 418438.0 360765.0 True False 325254.83075133956 304661.9421346692 335413.9791010256 310382.43253945396 332851.6247825533 283262.9471470386 324187.2512213343 359933.1300674462 342460.2071635836 357568.9027709225 0.9096284051292765 0.8520370193653326 0.9380401273762597 0.8680353076964897 0.930874083856771 0.7921912251091694 0.9066427441231537 1.0066119488529413 0.9577460581995344 1.0 18.447861747398232 -7.1542808520259324 4.9989598348355075 0.9860269265403812 0.8821967272582705 0.5694549240518576 0.041272672890824286 0.1604561766249167 6.073289189894158 0.01939544751174041 0.010930648629602031 7.010018239610614e-08 7.1542808520259324 -0.10383019928211068 MVNHFIAEFK ddPTM_KYSE-520_SHP099_60min_R1 6 MVNHFIAEFK 10 0 E9PKE3;P11142;A8K7Q2;P11142-2;E9PN89 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ;;;;; 136.96 0.00046141 13558780000.0 25923450.0 23677950.0 16531120.0 16302300.0 28451470.0 24466510.0 17819840.0 18582930.0 18853020.0 17570470.0 False True 24485424.551383592 22540425.74067247 17596742.445927195 17851665.69053477 30690438.822279863 24313805.43569891 19621243.332078885 18518470.153118473 15429786.813958535 17414809.30541879 1.406011637679243 1.294325154261597 1.0104470360437305 1.0250853384297496 1.7623183971776384 1.396156857608164 1.1266987187722775 1.0633748454171283 0.8860152611121274 1.0 24.053811339511544 -7.1160119004156535 2.519298694265467 0.9700845291128735 1.3053581362624627 0.3512552175946706 0.20297926153327758 0.3869293013661329 4.740432154932129 0.12859651499994437 0.06475283700572103 7.655756285350657e-08 7.1160119004156535 0.3352736071495892 MVPPVVVGS(ph)PPGS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 MVPPVVVGSPPGSPSR 16 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 2 MVPPVVVGS(1)PPGS(0.968)PS(0.032)R 67.646 0.024994 689520000.0 788240.0 611210.0 535350.0 554350.0 650330.0 579090.0 469680.0 615720.0 684150.0 519070.0 True False 744514.7558825158 581846.5541550862 569859.5175902861 607035.2573285949 701507.2711284609 575475.6845074717 517159.8380350662 613584.211030129 559925.6060180141 514471.4436303495 1.4471449583846168 1.130959864456823 1.1076601522702458 1.1799202168444418 1.3635494832877404 1.1185765344848841 1.0052255464088466 1.192649696357088 1.0883511863494677 1.0 18.972731475217405 -1.0000000000001654 0.1231486406919759 0.9625987783596573 2.0246260336256023 0.3765717465230901 0.10745730833792852 117.34714467361738 0.9906669892968953 0.7221784015344487 21.458093008583084 0.09999999999996191 1.0000000000001654 1.0620272552659449 MVPPVVVGS(ph)PPGSPSR ddPTM_KYSE-520_SHP099_60min_R1 3 MVPPVVVGSPPGSPSR 16 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 MVPPVVVGS(0.993)PPGS(0.006)PS(0.002)R;MVPPVVVGS(0.91)PPGS(0.08)PS(0.011)R;MVPPVVVGS(0.986)PPGS(0.011)PS(0.003)R 84.41 0.0032243000000000003 2195990000.0 541490.0 644020.0 411180.0 402900.0 489660.0 533560.0 407210.0 624470.0 661260.0 564560.0 True False 511452.47026644665 613080.3125062714 437685.32071126136 441191.4948636983 528193.4562157096 530229.8541259669 448374.7607866192 622303.8593223937 541191.8530080705 559558.4376210336 0.9140286981300652 1.0956501971675852 0.7821976960477682 0.7884636620607972 0.9439469065310274 0.947586200969898 0.8013010449683995 1.112133813883895 0.9671766461228808 1.0 19.093929281712775 -7.265564777722317 24.99969594485931 1.0297414178555624 0.8991295342553183 0.28249052089555005 0.09501411902871403 498.40776747761754 3020295.584121662 0.05122256259246627 0.026018099451375468 5.4254432143461066e-08 7.265564777722317 -0.13061188360024412 MVPPVVVGSPPGS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 MVPPVVVGSPPGSPSR 16 0 E9PIR9;E7ET48;Q8N1P7 E9PIR9 AIM1L Absent in melanoma 1-like protein 1 MVPPVVVGS(0.231)PPGS(0.671)PS(0.098)R 113.35 0.00020421 1007500000.0 351230.0 349440.0 273550.0 234740.0 268010.0 346070.0 272620.0 369370.0 426620.0 389000.0 True False 331746.5717403532 332652.37787986686 291183.4706954753 257049.6190228456 289100.862231696 343910.0487618512 300179.0901148015 368088.7416816062 349156.5622150184 385553.76263742015 0.8604417953828454 0.862791159407508 0.7552344158272631 0.6667024003720552 0.7498328125604893 0.8919898651988225 0.778566102069386 0.9547014641062179 0.9055976002583324 1.0 18.55657252182054 -7.367324889710352 1.0577632817607643 0.9847137777787105 0.7834352186022432 0.5301802413881556 0.06707256789961062 0.440483499909294 0.8753231584947795 0.06509908430199007 0.02465980848765635 4.292152166513494e-08 7.367324889710352 -0.2012785591764673 MVQEAEK ddPTM_KYSE-520_SHP099_60min_R1 4 MVQEAEK 7 0 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PS65;E9PM13;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 E9PKE3;A0A0G2JIW1 HSPA8;HSPA1B;HSPA1A Heat shock cognate 71 kDa protein;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ;;; 148.04 0.010674 1957180000.0 4007110.0 5310100.0 4434460.0 2548040.0 4085060.0 5214300.0 3447790.0 4351670.0 4207080.0 5024200.0 False True 3784827.620324257 5054994.825377406 4720312.386986866 2790204.955503842 4406530.981188061 5181755.619553628 3796326.260387754 4336575.072457416 3443180.3238562657 4979689.4967684485 0.7600529355857242 1.0151224948177644 0.9479129953885871 0.5603170553735399 0.8849007521548609 1.0405780567074132 0.7623620434268775 0.8708525050149454 0.6914447830714556 1.0 22.247624356710276 -10.07832449360397 4.64921388179164 1.0000070016178026 0.843608140314548 0.10587536687646992 0.14090105974047154 1.1933040556387232e-05 2.3655339948644377e-06 0.1374076554234968 0.03332452319952428 8.349789104562971e-11 10.07832449360397 -0.15639886130325464 MVQS(ph)SPPISGEDNKWER ddPTM_KYSE-520_SHP099_60min_R1 1 MVQSSPPISGEDNKWER 17 1 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y4W8;A0A2R8YG73;A0A2R8YGU1;A0A2R8Y4X4 Q3V6T2 CCDC88A Girdin 1 MVQS(0.5)S(0.5)PPISGEDNKWER 92.133 0.0010151 854120000.0 558480.0 552880.0 455670.0 459550.0 579150.0 538650.0 529920.0 582230.0 658960.0 573230.0 True False 527500.0010977219 526318.8149102009 485043.2172977781 503225.49383125425 624725.8100872604 535288.0855479274 583489.4851208102 580210.380023504 539309.4750297898 568151.6281661921 0.9284493345558467 0.9263703363994329 0.8537214244432234 0.8857239315770365 1.099575851086921 0.9421570915420282 1.0269960626604622 1.021224531022174 0.9492351131167303 1.0 19.115916481649915 -5.72649345620455 24.99998126307386 1.005397240854671 0.8973489631424196 0.5755944979317849 0.045406226653173454 129.0772046205943 92340.03882830906 0.013029632544558257 0.016820518680511307 1.8771827028861031e-06 5.72649345620455 -0.10804827771225134 MVQSS(ph)PPISGEDNKWER ddPTM_KYSE-520_SHP099_60min_R1 1 MVQSSPPISGEDNKWER 17 1 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y4W8;A0A2R8YG73;A0A2R8YGU1;A0A2R8Y4X4 Q3V6T2 CCDC88A Girdin 1 MVQS(0.263)S(0.735)PPIS(0.001)GEDNKWER 68.40100000000001 0.013184999999999999 910280000.0 535950.0 555210.0 493010.0 552880.0 522140.0 514260.0 489440.0 490400.0 550050.0 467150.0 True False 506219.78511016275 528536.8782128002 524790.2134438908 605425.5489705666 563229.4474297882 511050.3125849382 538917.3716740822 488698.9168602206 450174.7856321104 463011.41443720093 1.093320314198911 1.1415201909336226 1.1334282418971964 1.3075823405055202 1.2164482988273715 1.1037531616928482 1.1639397104910392 1.0554791990479184 0.972275783264018 1.0 18.820688234550744 -7.401878934638209 1.9329691027863236 0.982290254921929 1.1720373764050034 0.611285427631859 0.05862263079402912 0.25661260538241404 1.7408001017204986 0.05136107017228112 0.018317367187839488 3.963885174255424e-08 7.401878934638209 0.18974712148307438 MVS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 3 MVSPLR 6 0 Q53ET0;H0YDQ8 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 1 MVS(1)PLR;MVS(1)PLR;MVS(1)PLR 85.64200000000001 0.016891999999999997 630270000.0 726010.0 651780.0 592210.0 601580.0 674140.0 673910.0 619380.0 705650.0 724720.0 624640.0 True False 685736.7780349457 620467.5104582744 630384.8041695018 658753.9823283779 727190.9826680922 669703.8777157782 681992.974966273 703202.2648499475 593129.1167044867 619106.1755625671 1.1076238698666396 1.0021988714528172 1.0182175999079415 1.0640403994190235 1.1745820206159485 1.0817270189676822 1.1015767599904203 1.135834680070772 0.9580410277211729 1.0 19.239827324622514 -3.8979701841642593 19.641705529912073 1.0674839989212161 5.159737907537702 0.035856539088208406 0.0638279094535427 1951.568537054305 359665.4914981024 0.015651058828294078 15260.991423160098 0.0001264823179027217 3.8979701841642593 4.0922539086164855 MVS(ph)PLRR ddPTM_KYSE-520_SHP099_60min_R1 1 MVSPLRR 7 1 Q53ET0;H0YDQ8 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 1 MVS(1)PLRR 105.94 0.0025099 407590000.0 217110.0 180630.0 173260.0 169370.0 177250.0 173920.0 151550.0 173900.0 212390.0 178520.0 True False 205066.475501945 171952.26366884253 184428.61682580144 185466.87387705283 191198.56658545593 172834.50076765174 166870.15298546758 173296.78148856515 173825.32991619676 176938.45168645846 1.1589706677513516 0.971819647057545 1.0423320373155285 1.0481999368102703 1.0805936457738814 0.9768057712741882 0.9430971696370878 0.9794184352627517 0.9824056233080514 1.0 17.432888078311482 -6.276810367103566 22.548713077806788 0.9729810046675106 1.0537832956144955 0.4596699032515942 0.04520120159773479 211.81982820743247 310730.41117566027 0.015382912910202648 0.013632445838727 5.286760456013413e-07 6.276810367103566 0.08080229094698488 MVS(ph)QSQPGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 MVSQSQPGSR 10 0 E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 2 MVS(0.552)QS(0.448)QPGS(1)R 75.669 0.06819299999999999 128440000.0 243180.0 211980.0 245040.0 219060.0 214810.0 211480.0 219550.0 232630.0 263830.0 248450.0 True False 229690.32063268847 201796.16261153322 260835.67047786224 239879.3965372094 231714.32489828937 210160.07487547732 241744.25660151363 231823.06082625015 215925.12261307111 246248.9262911752 0.9327566381389736 0.8194803756135808 1.059235767669659 0.9741337765410835 0.940975980639609 0.8534456496552401 0.9817068453556015 0.9414175497851013 0.8768571131057525 1.0 17.9097579084971 -10.631072534557406 2.66786174423728 1.0069806986596448 0.9326595597133732 0.09091459884074737 0.06518546086264315 47390594.330533214 42095467.20296291 2282333.3825453115 0.016845500574966026 2.338446645720964e-11 10.631072534557406 -0.07432113894627157 MVSDINNGWQHLEQAEK ddPTM_KYSE-520_SHP099_60min_R1 1 MVSDINNGWQHLEQAEK 17 0 O43707;O43707-2 O43707 ACTN4 Alpha-actinin-4 0 285.47 3.1078e-37 259070000.0 316510.0 341590.0 234740.0 305920.0 367590.0 295110.0 266590.0 276460.0 283070.0 253690.0 False True 298952.55935295747 325179.5036629571 249871.71599727974 334994.5448217978 396517.2416990006 293268.1090245041 293539.5188676725 275501.02478624927 231671.6236140015 251442.50396783312 1.1889499771733194 1.2932559075396304 0.9937528940184499 1.332290839995188 1.5769698258721079 1.1663426206653655 1.1674220318185535 1.0956819966344828 0.921370173929063 1.0 17.93986901870802 -7.272964159309861 1.6107255268341987 0.9669428593644628 1.2640197659473755 0.40909011602927137 0.14063488032415317 0.4392937193458392 2.058013917802861 0.1189436568016401 0.04578179071489296 5.333789114267955e-08 7.272964159309861 0.29707690658291275 MVSQS(ph)QPGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 MVSQSQPGSR 10 0 E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 2 MVS(0.165)QS(0.835)QPGS(1)R 80.905 0.018359 0.0 183410.0 174880.0 170550.0 188870.0 161600.0 146690.0 163460.0 173150.0 232860.0 188300.0 True False 173235.88168122934 166478.5022997684 181543.9258896482 206820.14801416374 174317.00062177549 145774.45329810743 179984.13201586623 172549.38306351384 190578.4939229036 186631.80849518313 0.9282227026466416 0.8920156946561718 0.972738395204126 1.1081720189166022 0.9340154930035655 0.7810804303590607 0.9643807958947765 0.9245443445829721 1.0211469066261678 1.0 17.509835366561216 -7.76329014457629 24.999149904958802 1.0105734842669356 0.9389304124356321 0.12612203282356982 0.0762367370584647 116.66317280838551 1575610.5483931547 0.06714275841222661 0.02076082444035916 1.724685274829848e-08 7.76329014457629 -0.07164307183130347 MVSQSQPGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 MVSQSQPGSR 10 0 E3W994;J3KR49;O75122;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 MVSQSQPGS(1)R;MVSQSQPGS(1)R;MVSQSQPGS(1)R 142.12 0.00022707 2387210000.0 2769470.0 2341670.0 2299920.0 2225040.0 2411380.0 2407610.0 2124360.0 2147610.0 2678010.0 2188180.0 True False 2615841.978298431 2229172.6582816737 2448176.523202113 2436507.1326173325 2601141.887124611 2392583.2129324186 2339111.0405556434 2140160.44216594 2191750.891138349 2168794.427578281 1.2061272129047895 1.0278395360738786 1.128819076659006 1.123438488053469 1.1993492117319287 1.1031857987591864 1.078530547114851 0.9867972800703319 1.0105848960455426 1.0 21.0484618808089 -7.022741729940681 2.29014590647345 0.9978702527945825 1.1300731188285644 0.6126485841474141 0.04705831568735706 0.21632904933682276 2.2410720273928955 0.026439509496684048 0.01404981831244618 9.489826448674792e-08 7.022741729940681 0.1322028660339819 MVTLQLLNQQEQEKEES(ph)S(ph)S(ph)EEEEEKAEERPR ddPTM_KYSE-520_SHP099_60min_R1 3 MVTLQLLNQQEQEKEESSSEEEEEKAEERPR 31 3 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 3 MVTLQLLNQQEQEKEES(1)S(1)S(1)EEEEEKAEERPR;MVT(0.001)LQLLNQQEQEKEES(0.999)S(1)S(1)EEEEEKAEERPR;MVTLQLLNQQEQEKEES(1)S(1)S(1)EEEEEKAEERPR 104.35 0.0005447999999999999 2108680000.0 1796960.0 1815910.0 1639660.0 1679140.0 1714160.0 1686510.0 1661130.0 1923800.0 2252480.0 1487090.0 True False 1697279.0466490502 1728670.9578635204 1745355.1071487584 1838724.9607481488 1849054.6397637539 1675983.8655108796 1829053.231466507 1917126.7868182955 1843486.4123999933 1473915.5395385146 1.1515443057072803 1.1728426164804329 1.18416222661933 1.2475103975929698 1.2545187225196743 1.1370962721755637 1.2409484684849628 1.300703286850854 1.2507408755437859 1.0 20.491222424706883 -5.003777900378268 3.855556439120943 1.2179031528133732 1.1637512938691446 0.023621009297841056 0.08061263540046877 0.6072642354934317 20.304400485683637 0.021097141363338907 0.04370251345704845 9.91338789187361e-06 5.003777900378268 -0.05415185894422869 MVVS(ph)MPNLQDIAMPELAPR ddPTM_KYSE-520_SHP099_60min_R1 1 MVVSMPNLQDIAMPELAPR 19 0 H0YAY3;E9PF32;A2RUS2-2;A2RUS2 H0YAY3 DENND3 DENN domain-containing protein 3 1 MVVS(1)MPNLQDIAMPELAPR 207.56 7.763600000000002e-15 82587000.0 41085.0 68109.0 45047.0 51429.0 41749.0 53451.0 37732.0 49332.0 64363.0 51533.0 True False 38805.93314908303 64836.94140630672 47950.8016977484 56316.796697307334 45034.40878068383 53117.39248235825 41546.31878883312 49160.87880617538 52676.30165919378 51076.45771206734 0.7597616375012382 1.2694095148847475 0.9388043698735108 1.1025979329808127 0.8817057955458799 1.039958424325278 0.8134142548224791 0.9624958544171048 1.0313225313342052 1.0 15.640370853328514 -5.763259644093127 24.99895546958348 0.9501279638066441 1.0299952961828667 0.04516049531196897 0.13587009837933067 135.44808363335136 1860209.61188051 0.03879221165688397 0.046257351258051076 1.7248064036574086e-06 5.763259644093127 0.07986733237622257 MVY(ph)MFLGVS(ph)IIADRFMAAIEVIT(ph)S(ph)KEK ddPTM_KYSE-520_SHP099_60min_R1 1 MVYMFLGVSIIADRFMAAIEVITSKEK 27 2 M0R1Z4 M0R1Z4 SLC8A2 4 MVY(1)MFLGVS(1)IIADRFMAAIEVIT(1)S(1)KEK 41.763000000000005 0.068466 194940000.0 145540.0 167740.0 78049.0 275060.0 148430.0 128330.0 159630.0 207790.0 176740.0 95807.0 True False 137466.60607320283 159681.51861712703 83080.16342281543 301201.6197001956 160110.5965488253 127529.04486840361 175766.95823866825 207069.2249885508 144648.4712528301 94958.22451671801 1.4476534999767288 1.6815975596617654 0.8749127718598891 3.17193819948863 1.6861161564856006 1.3430015727173932 1.8509924667738848 2.180634969139455 1.5232853393058523 1.0 16.53500533996237 -8.013345135456127 22.925358575861488 0.9999999326739515 1.781969442246056 0.14865549590190807 0.5694019350781541 455.63962820234747 782738.3974439226 0.5467724822291199 0.141176047859429 9.697390057125402e-09 8.013345135456127 0.7819695095721044 MWFS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 MWFSPR 6 0 A0A494C142;Q99728-3;Q99728-2;Q99728;A0A087X2H0 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 MWFS(1)PR;MWFS(1)PR 89.75200000000001 0.015546 582450000.0 571090.0 587800.0 507970.0 492770.0 525830.0 486460.0 468560.0 486580.0 566950.0 541930.0 True False 539410.4992603089 559561.2056942119 540714.5589807362 539602.7126432969 567209.8294365605 483423.8226968251 515926.61750492046 484892.16754862526 464006.1716464408 537128.9218151595 1.00424772778468 1.041763314109479 1.0066755615271274 1.0046055811326964 1.0560031426342606 0.9000145087387125 0.9605266008790059 0.9027482003947829 0.8638636885878169 1.0 19.034908880227277 -6.2658432733636955 24.997132891318277 0.9215458597274713 1.021829469669568 0.6235665545878227 0.03770856191031127 241.88814324640387 1372986.7188810098 0.012644155258265483 0.011524129190877669 5.421965210377721e-07 6.2658432733636955 0.10028360994209673 MWGT(ph)SPEDK ddPTM_KYSE-520_SHP099_60min_R1 2 MWGTSPEDK 9 0 Q9H4Z3 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 1 MWGT(0.5)S(0.5)PEDK;MWGT(0.77)S(0.23)PEDK 164.33 0.00056522 1987670000.0 4290000.0 3621400.0 3325000.0 3429100.0 3721000.0 3913000.0 3558500.0 3775000.0 4064000.0 3798800.0 True False 4052025.148097023 3447422.508167783 3539334.820188105 3755000.6330034877 4013821.5304061035 3888577.515546349 3918227.907613233 3761905.4060916193 3326080.0451029846 3765145.587421674 1.0761934841600111 0.9156146629986056 0.9400260197141006 0.9973055611841206 1.0660468333057793 1.0327827769892957 1.0406577426123882 0.999139427346215 0.883386835349611 1.0 21.84427422019493 -3.6795451702609356 6.433921916802274 0.990850550791307 10.919494702121538 0.1918792780593317 0.054667416777400196 11008.264283022636 2257.8141534299198 0.014863381383951244 1588882.1168893795 0.00020914853638074113 3.6795451702609356 9.92864415133023 MWGTS(ph)PEDK ddPTM_KYSE-520_SHP099_60min_R1 3 MWGTSPEDK 9 0 Q9H4Z3 Q9H4Z3 PCIF1 Phosphorylated CTD-interacting factor 1 1 MWGT(0.077)S(0.923)PEDK;MWGTS(1)PEDK;MWGT(0.001)S(0.999)PEDK 247.96 1.2435e-13 3234490000.0 8246600.0 7156200.0 6411500.0 6656300.0 7134700.0 7197900.0 6821400.0 6970000.0 7670400.0 6670200.0 True False 7789144.658810461 6812405.4103248045 6824795.548762708 7288912.750710433 7696160.299110028 7152975.236174566 7510973.68244848 6945822.696810225 6277648.7150487 6611107.21733708 1.1781906423154165 1.0304484840995827 1.0323226237906484 1.102525267113482 1.164125772900413 1.0819632780143817 1.1361143353947694 1.0506292620085453 0.9495608691061743 1.0 22.656460481479364 -7.570366500797743 4.4891271395193275 0.9772876899952804 1.0994180510569984 0.5350082457118663 0.04765264659547925 0.1694630556270997 7.371931535405536 0.03543137671263342 0.01270872266739173 2.6892643778016306e-08 7.570366500797743 0.12213036106171804 MWMT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 MWMTPK 6 0 Q7L775 Q7L775 EPM2AIP1 EPM2A-interacting protein 1 1 MWMT(1)PK 44.692 0.052152 0.0 107110.0 241670.0 345850.0 57774.0 69138.0 163650.0 64584.0 72553.0 93019.0 163730.0 True False 101168.39478150848 230059.8104459348 368144.04437956493 63264.8235896135 74578.76725859109 162628.59964711472 71112.7809990988 72301.33057699757 76129.09441816794 162279.47958001262 0.6234207494585103 1.4176765358216643 2.268580385716913 0.3898510381802186 0.4595699188314176 1.0021513506698791 0.43821178859546644 0.44553587899170627 0.46912335814234696 1.0 17.30812105546966 -5.295463745522953 24.99921846225724 0.5816165464851782 1.434671462888565 0.44742670569664844 0.4253378173070552 537.1643490058052 394677.4433930309 0.12083211415912717 0.17923332673064488 5.06449625676862e-06 5.295463745522953 0.8530549164033868 MWNDLS(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 2 MWNDLSEK 8 0 E9PKP7;P17480-2;P17480;E9PLT2 E9PKP7 UBTF Nucleolar transcription factor 1 1 MWNDLS(1)EK;MWNDLS(1)EK 79.693 0.0193 128250000.0 346320.0 350470.0 299150.0 320090.0 357410.0 345450.0 299380.0 336180.0 394160.0 360120.0 True False 327108.9392281961 333632.89513380546 318433.6876569233 350511.2573614321 385536.13361527695 343293.9184118293 329644.25206723344 335013.87004500197 322590.47996500775 356929.61696912075 0.9164522182436193 0.9347302080641552 0.8921470018680802 0.9820178564553136 1.08014609964023 0.9617972342192295 0.9235553352686676 0.9385992479127481 0.9037929738201473 1.0 18.44528009137907 -5.269466487753146 24.906382962026566 0.9697426743408424 0.9164718487845462 0.2296008221748126 0.04657879976544013 973.0986414186513 3019311.0627334053 0.014514630309792324 0.02194356230571093 5.3769192241115276e-06 5.269466487753146 -0.05327082555629614 MY(ph)EENSQPR ddPTM_KYSE-520_SHP099_60min_R1 2 MYEENSQPR 9 0 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 MY(0.999)EENS(0.001)QPR;MY(1)EENSQPR 98.58200000000001 0.0059907 155250000.0 1074480.0 1075270.0 976570.0 833680.0 969570.0 970040.0 832410.0 888040.0 1199290.0 894190.0 True False 1014876.4524772223 1023612.4151868253 1039521.2647672461 912912.6965449688 1045869.6429013298 963985.6205419324 916558.1263387183 884959.5965100944 981529.1676406397 886268.1722692926 1.1451121502858754 1.1549691698460323 1.172919548837626 1.0300637268824093 1.180082593086218 1.0876906682473364 1.0341769624783752 0.9985234990941312 1.1074855200175258 1.0 19.75738377848037 -6.317720653742682 0.48956401820702056 1.0142387438981566 1.1653805707193579 0.4681541117134753 0.04931357430678955 0.9619299192003551 0.4913543954434318 0.04576751104237278 0.05905757687586015 4.811487327177674e-07 6.317720653742682 0.15114182682120125 MY(ph)QVEFKT(ph)MNAKLLMDPK ddPTM_KYSE-520_SHP099_60min_R1 1 MYQVEFKTMNAKLLMDPK 18 2 E7ENE1;E9PGR3;P29459 E7ENE1 IL12A Interleukin-12 subunit alpha 2 MY(1)QVEFKT(1)MNAKLLMDPK 42.647 0.049532 89823000.0 108380.0 109390.0 117700.0 86905.0 93098.0 89186.0 91121.0 101560.0 152910.0 76600.0 True False 102367.94534982638 104134.74020226242 125287.13032665859 95164.42507105903 100424.28294483955 88629.3570921331 100332.39993526074 101207.71206428228 125145.3985474156 75921.38359389815 1.3483414092845083 1.3716127824971802 1.6502219058179546 1.2534600999909524 1.3227404216183267 1.1673833233362767 1.3215301827471504 1.3330593737021466 1.6483550828949016 1.0 16.212218663871944 MY(ph)SLDRIFAGFRT(ph)RS(ph)QMLLGHIEEQDK ddPTM_KYSE-520_SHP099_60min_R1 2 MYSLDRIFAGFRTRSQMLLGHIEEQDK 27 3 Q86VH2-4 Q86VH2-4 3 MY(0.711)S(0.405)LDRIFAGFRT(0.946)RS(0.938)QMLLGHIEEQDK;MY(0.808)S(0.578)LDRIFAGFRT(0.823)RS(0.791)QMLLGHIEEQDK 66.083 0.016102 4949200000.0 2130710.0 1970790.0 1757920.0 1641120.0 1717050.0 1827670.0 1788370.0 1771020.0 2264630.0 1977850.0 True False 2012515.2688349178 1876110.2901839004 1871238.335971449 1797091.5513792795 1852172.066321902 1816262.8335902349 1969155.8924092408 1764876.7449791739 1853430.2786765688 1960327.7877440164 1.0266218136666623 0.9570390737270347 0.9545537984363863 0.9167301318762653 0.9448277364131118 0.9265097627782064 1.0045033818937923 0.9002967544576964 0.9454695741519497 1.0 20.90266347785536 -4.197850653001665 2.369928448751 0.9454476032883928 1.0545136706402618 0.3488593793205972 0.0312546148118338 0.7591147382401313 4.4454103938122325 0.007759514771311272 0.18112810279318634 6.340877265016172e-05 4.197850653001665 0.10906606735186897 MYEEHLK ddPTM_KYSE-520_SHP099_60min_R1 6 MYEEHLK 7 0 G3V279;P84090 G3V279 ERH Enhancer of rudimentary homolog 0 ;;;;; 128.86 0.0035823 7297100000.0 14692500.0 12824100.0 8261640.0 8179030.0 14034700.0 13604300.0 10692800.0 11741900.0 10143200.0 11362100.0 False True 13877477.736227384 12208010.986633472 8794198.533491366 8956362.552084971 15139151.043480393 13519390.517441137 11773732.575671421 11701170.089480069 8301450.569263931 11261440.633580042 1.232300394573558 1.0840541085152897 0.7809123911969393 0.7953123266821076 1.3443351997379056 1.200502756026454 1.0454907998683398 1.0390473537274454 0.7371570689197762 1.0 23.42488806196497 -7.630658639655643 8.207438421822594 0.8699604064610552 1.0620547951458155 0.16578825534888664 0.17702533890506605 0.4809305231417009 33.1350087361367 0.1301278170069777 0.048655861240542574 2.340676313690211e-08 7.630658639655643 0.19209438868476025 MYEEHLKR ddPTM_KYSE-520_SHP099_60min_R1 6 MYEEHLKR 8 1 G3V279;P84090 G3V279 ERH Enhancer of rudimentary homolog 0 ;;;;; 214.64 1.7893e-08 6692760000.0 5317120.0 5062450.0 3830440.0 3083250.0 5034700.0 4581280.0 3400090.0 3676970.0 4227380.0 3055150.0 False True 5022168.754184059 4819242.303107628 4077356.2913206965 3376281.1529870825 5430902.246475583 4552686.532180471 3743804.2788806194 3664215.4492812525 3459794.3555776225 3028083.7478707335 1.658530335468929 1.5915155274342687 1.3465137132312748 1.1149893576626446 1.7935112429748505 1.5034876546534743 1.2363608772423025 1.210077314360222 1.1425689127688283 1.0 21.529973675891867 -6.888507978399522 3.1801803706009117 1.141940348975854 1.4946496370069693 0.49293038430109004 0.17817746492295772 0.25262680541952465 5.063569574191243 0.08804489187192084 0.05594663198846041 1.2926829527827439e-07 6.888507978399522 0.35270928803111534 MYFPDVEFDIKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 MYFPDVEFDIKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 MYFPDVEFDIKS(1)PK;MYFPDVEFDIKS(1)PK;MYFPDVEFDIKS(1)PK;MYFPDVEFDIKS(1)PK;MYFPDVEFDIKS(1)PK;MYFPDVEFDIKS(1)PK 203.56 1.4744e-11 7911380000.0 8480270.0 8591570.0 8773300.0 8815660.0 8489370.0 11471910.0 12734510.0 15483290.0 21533030.0 14676930.0 True False 8009852.518100865 8178818.080990511 9338840.955776311 9653497.675875176 9157435.121092094 11400309.554401053 14021838.54764081 15429582.080817057 17623174.55551276 14546903.818678752 0.5506224979514833 0.5622377230877551 0.6419813502709011 0.6636118445685834 0.6295109416571254 0.7836931966074212 0.9639053589971676 1.0606780847072705 1.2114725425546544 1.0 23.794208784989863 -6.7112468366932045 1.3209406410075604 1.1144223967446547 0.5998928131160118 0.9328375991193715 0.05767589153390326 0.1011495380563522 0.35784905350389834 0.035153821745102544 0.021349416804041822 1.9442547260734532e-07 6.7112468366932045 -0.5145295836286429 MYPESTTGS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 1 MYPESTTGSPAR 12 0 A0A590UJJ4;A0A590UJY1;Q13303-2;Q13303-5;Q13303;Q5TG84;A0A5F9UN28;Q5TG78;A0A590UJU4;A0A590UJ15;K7EKU4;A0A590UJU1;K7EIR5;A0A590UK89;A0A590UJK5;A0A590UJX9;A0A590UJV4;A0A590UJ72;A0A590UJI8 A0A590UJJ4 KCNAB2 Voltage-gated potassium channel subunit beta-2 1 MYPESTT(0.002)GS(0.998)PAR 107.09 0.00051806 0.0 211970.0 167670.0 146910.0 119010.0 176550.0 147820.0 145650.0 158270.0 266490.0 166380.0 True False 200211.60154828086 159614.88152219923 156380.05366431107 130320.67461833874 190443.4805679112 146897.4005489551 160373.7234070165 157720.99831049587 218102.13366621404 164906.00264168135 1.2140952927184454 0.9679143206752818 0.9482981283835008 0.7902724735952039 1.154860814749839 0.8907947448592486 0.9725159838813577 0.9564296980335062 1.3225845643722307 1.0 17.33128438882026 -7.726893489725061 24.999955374468378 1.1612928775738445 0.9803399590066663 0.20880039123556204 0.13530984739721938 223.41149257772426 161677.5239548068 0.08715581876550779 0.03293829886637912 1.8754544049340743e-08 7.726893489725061 -0.1809529185671782 MYPPRS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 14 MYPPRSPK 8 1 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 MY(0.001)PPRS(0.999)PK;MYPPRS(1)PK;MYPPRS(1)PK;MYPPRS(1)PK;MYPPRS(1)PK;MYPPRS(1)PK;MYPPRS(1)PK;MY(0.001)PPRS(0.999)PK;MYPPRS(1)PK;MYPPRS(1)PK;MYPPRS(1)PK;MY(0.001)PPRS(0.999)PK;MYPPRS(1)PK;MY(0.001)PPRS(0.999)PK 106.4 0.0025453000000000003 35693110000.0 16118350.0 15771560.0 14342360.0 13800830.0 14560300.0 15184730.0 15828380.0 16564430.0 20589850.0 16222330.0 True False 15224232.994365877 15013870.584005795 15266891.474187363 15112456.73382916 15706112.773225475 15089956.46758041 17428467.12050221 16506971.85849703 16851252.267879866 16078612.776981756 0.9468623447515936 0.9337789765980152 0.9495154641726021 0.9399104850304155 0.9768325782253084 0.938511094015728 1.0839534083097588 1.0266415447313038 1.0480538651944045 1.0 23.938639603930998 -6.748862449541552 24.999975669500003 1.0418823338196432 0.9480122725358309 0.8030441430118131 0.022331978887068806 88.34710371354036 175613.39081645064 0.008129929802611504 0.006253411815356905 1.7829433747727408e-07 6.748862449541552 -0.09387006128381237 MYS(ph)FDDVLEEGK ddPTM_KYSE-520_SHP099_60min_R1 16 MYSFDDVLEEGK 12 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MYS(1)FDDVLEEGK;MY(0.003)S(0.997)FDDVLEEGK 278.46 2.2406e-22 6707903000.0 6536010.0 5489831.0 4468195.0 5793524.0 6431646.0 8211810.0 9356250.0 10637730.0 10713190.0 9779150.0 True False 6173444.496087096 5226091.278355678 4756221.9990647705 6344138.779073501 6937779.949140107 8160557.047773749 10302071.058200445 10600830.197494853 8767944.753542537 9692514.339063566 0.6369291063317155 0.5391883979261249 0.4907108550663531 0.6545400457655072 0.7157874320782687 0.8419442842487632 1.0628894317628392 1.0937131302215894 0.9046099336892643 1.0 23.20843953361898 -6.235038534511983 1.412732755790664 1.0252597662810528 0.5626878429686972 0.8973068196982869 0.06616110366589584 0.12018076957992892 0.48302179366887293 0.030941592155526033 0.028574698271054327 5.82051570629952e-07 6.235038534511983 -0.4625719233123555 MYS(ph)FDDVLEEGKR ddPTM_KYSE-520_SHP099_60min_R1 1 MYSFDDVLEEGKR 13 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 MYS(1)FDDVLEEGKR 92.8 0.0016055999999999998 0.0 85000.0 72184.0 42463.0 69402.0 71046.0 81558.0 92056.0 95714.0 121920.0 109420.0 True False 80284.88055670093 68716.17228960707 45200.2329232022 75997.94521352778 76636.9160035561 81048.966269596 101361.91885998132 95381.99047381555 99782.40135308949 108450.62392747193 0.7402897064971494 0.6336171227153299 0.4167816771015589 0.7007607928964301 0.7066526058421596 0.7473351773780369 0.9346365672157747 0.8794969269849823 0.9200721742257615 1.0 16.726678827442207 -6.44614803482413 1.1148211581660272 0.9428223922662051 0.6060924950183182 0.7286334778893708 0.08528632750695185 0.26941616210656877 0.6894359580308057 0.05159201571062615 0.039201307467967995 3.5797439615662235e-07 6.44614803482413 -0.33672989724788693 MYS(ph)FDDVLEEGKRPPTMTVSEASYQSER ddPTM_KYSE-520_SHP099_60min_R1 3 MYSFDDVLEEGKRPPTMTVSEASYQSER 28 2 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 MYS(1)FDDVLEEGKRPPTMTVSEASYQSER;MYS(1)FDDVLEEGKRPPTMTVSEASYQSER;MYS(1)FDDVLEEGKRPPTMTVSEASYQSER 238.86 4.2076e-31 7612190000.0 981460.0 973440.0 751940.0 817570.0 893280.0 1007100.0 1147690.0 1239010.0 1821160.0 1215490.0 True False 927016.4573079948 926674.4812367713 800411.2555465379 895271.6069886171 963576.0539320527 1000814.3153352229 1263709.7055749993 1234712.1634971085 1490483.2517076172 1204721.704236909 0.7694859767594066 0.7692021136314984 0.6643951484658707 0.7431356169977009 0.7998328996175909 0.8307431598645892 1.0489640064843475 1.024894097246464 1.2372012942621584 1.0 20.20026848566542 -6.703902002639635 1.5065725399981738 1.1070090346111585 0.738163376625838 0.845627925292587 0.06683077861689081 0.13940795292569624 0.6455656390578602 0.036159744809098754 0.022716810798239565 1.9774157882306433e-07 6.703902002639635 -0.36884565798532054 MYSFDDVLEEGKRPPT(ph)MTVSEASYQSER ddPTM_KYSE-520_SHP099_60min_R1 2 MYSFDDVLEEGKRPPTMTVSEASYQSER 28 2 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 MYS(0.005)FDDVLEEGKRPPT(0.572)MT(0.15)VS(0.224)EAS(0.018)YQS(0.03)ER;MYS(0.208)FDDVLEEGKRPPT(0.444)MT(0.17)VS(0.17)EAS(0.006)YQS(0.002)ER 211.77 7.3895e-22 2833600000.0 821540.0 820390.0 710140.0 737730.0 809270.0 957420.0 1061230.0 1453010.0 1632550.0 1161710.0 True False 775967.5385006118 780977.2329695043 755916.7606641746 807843.6373933883 872954.9448835655 951444.3866430846 1168509.4850067142 1447969.8474450852 1336120.0732364377 1151418.1531967048 0.673923314780367 0.6782742054233398 0.6565093303119358 0.701607522124396 0.7581563157224538 0.8263239414817031 1.0148437227279754 1.2575534295903343 1.1604125482362262 1.0 20.134980432323022 -6.709811235446424 1.7078824276465876 1.1597732974430008 0.6869341643930309 0.900355816061998 0.06590488374517396 0.09897671421685847 0.5907140723988179 0.03438186777921731 0.022102774789401508 1.9506922769924268e-07 6.709811235446424 -0.47283913304996994 NAASFPLRS(ph)PQPVCSPAGSEGTPK ddPTM_KYSE-520_SHP099_60min_R1 2 NAASFPLRSPQPVCSPAGSEGTPK 24 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 NAASFPLRS(1)PQPVCSPAGSEGTPK;NAASFPLRS(0.999)PQPVCS(0.001)PAGSEGTPK 244.04 9.8415e-29 2885800000.0 794960.0 878120.0 576440.0 673290.0 658990.0 788770.0 693320.0 847640.0 1008370.0 851560.0 True False 750861.9840865295 835933.7971150076 613598.2447366096 737279.27916798 710848.7638598016 783846.9938506244 763407.5517511328 844699.7346806634 825275.4269390985 844015.8409036541 0.8896302032466731 0.9904242984586719 0.7269984933927952 0.8735372530195694 0.8422220643379443 0.9287112348642541 0.9044943409282257 1.0008102854755394 0.9777961347923387 1.0 19.686910550832163 -6.9837748814541944 1.3380721135970202 0.9976367143679373 0.8663575436170277 0.4168850753825003 0.06273742394106721 0.4638086041439701 1.5916731982617565 0.04594632455929345 0.021831564374534273 1.038066362864621e-07 6.9837748814541944 -0.13127917075090967 NADHSMNYQYR ddPTM_KYSE-520_SHP099_60min_R1 1 NADHSMNYQYR 11 0 Q12906;K7ELV3;Q12906-7 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 0 106.26 0.0012882 784840000.0 502220.0 382330.0 343090.0 288690.0 330950.0 376120.0 367870.0 330820.0 381220.0 289480.0 False True 474360.8554492504 363962.29291096976 365206.1303634092 316127.0108021865 356993.88215208263 373772.49556536967 405057.88966521836 329672.4626339688 312000.0577741534 286915.4324120324 1.6533124463240167 1.2685350866323992 1.2728702924523956 1.1018125032333712 1.2442477532522973 1.3027270524389358 1.4117675241794747 1.1490231106165598 1.0874286375997286 1.0 18.13026604332948 -4.1297138484013685 2.061172053125319 1.2105360577347566 1.8957180341919957 0.5879702709362606 0.11366950379511603 0.8562440604317586 2.9449226034264653 0.030887738595717435 1.2354025915880043 7.417988429729862e-05 4.1297138484013685 0.6851819764572391 NAEAVLQS(ph)PGLSGK ddPTM_KYSE-520_SHP099_60min_R1 11 NAEAVLQSPGLSGK 14 0 Q13045-2;Q13045-3;Q13045 Q13045-2 FLII Protein flightless-1 homolog 1 NAEAVLQS(1)PGLSGK;NAEAVLQS(1)PGLSGK;NAEAVLQS(1)PGLSGK;NAEAVLQS(1)PGLSGK;NAEAVLQS(1)PGLSGK;NAEAVLQS(1)PGLSGK;NAEAVLQS(1)PGLSGK;NAEAVLQS(1)PGLSGK;NAEAVLQS(1)PGLSGK;NAEAVLQS(1)PGLSGK;NAEAVLQS(1)PGLSGK 379.68 2.5222999999999998e-81 27688650000.0 32130600.0 37183600.0 26011230.0 21925640.0 22574550.0 34425480.0 24513210.0 32136190.0 36995200.0 34326050.0 True False 30348251.56723689 35397244.042278536 27687955.505239524 24009446.233415943 24351038.65338056 34210617.8098366 26991244.492674954 32024717.05753313 30277804.253098924 34021947.90226279 0.892019811870279 1.0404237918406862 0.8138262860427814 0.7057046322682505 0.7157449868342483 1.005545535138547 0.7933480049471174 0.9412958114430354 0.8899491686978086 1.0 25.01996240804894 -8.022766078221634 0.8881820535247464 0.9967840821311235 0.8516372978070798 0.14610131152358385 0.10501223422663569 1.380919953941802 2.4581454491908103 0.10813134116916905 0.038032019649571196 9.489294426065205e-09 8.022766078221634 -0.1451467843240437 NAEEES(ph)ES(ph)EAEEGD ddPTM_KYSE-520_SHP099_60min_R1 2 NAEEESESEAEEGD 14 0 H0Y503;Q7L1Q6-2;Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3 H0Y503 BZW1 Basic leucine zipper and W2 domain-containing protein 1 2 NAEEES(1)ES(1)EAEEGD;NAEEES(1)ES(1)EAEEGD 192.46 4.2293e-07 0.0 277810.0 298830.0 243562.0 248560.0 233210.0 286370.0 240300.0 271080.0 332330.0 285900.0 True False 262399.32549949497 284473.7582470255 259262.39623297844 272183.0676677112 251562.30021661034 284582.6586064424 264591.869101998 270139.68675054744 271987.2493575483 283367.14842683414 0.9260047502198262 1.0039052156410329 0.9149345563602636 0.9605314842556256 0.887760989984921 1.0042895239845422 0.9337422159587989 0.9533204122294294 0.9598404432819277 1.0 18.112312986578086 -6.28909323511141 24.996206729994235 0.9650400139977026 0.9421545397518152 0.16068639055391554 0.03466687706896083 1880.9802129744864 1700203.205167218 0.011835085981115835 0.010439795920493924 5.13933307622344e-07 6.28909323511141 -0.022885474245887383 NAEEES(ph)ESEAEEGD ddPTM_KYSE-520_SHP099_60min_R1 2 NAEEESESEAEEGD 14 0 H0Y503;Q7L1Q6-2;Q7L1Q6;Q7L1Q6-4;Q7L1Q6-3 H0Y503 BZW1 Basic leucine zipper and W2 domain-containing protein 1 1 NAEEES(0.987)ES(0.013)EAEEGD;NAEEES(0.995)ES(0.005)EAEEGD 117.2 0.0001246 22636000.0 39311.0 45297.0 29061.0 29052.0 33303.0 41708.0 34958.0 38340.0 40648.0 41896.0 True False 37130.34046546435 43120.86412781686 30934.318559244013 31813.09334519771 35923.7566318502 41447.68490120293 38491.895797202036 38207.007488623276 33267.347852693456 41524.83403459478 0.8941719173285719 1.0384355562238348 0.7449594749366681 0.7661221070430742 0.8651149960508387 0.9981420965264406 0.926960858293474 0.9201001852720859 0.801143427207393 1.0 15.341686781621615 -6.04049781135579 24.64611721478395 0.9249643435901859 0.8591061799942771 0.121903226345762 0.09022679087405865 1097.7852176339322 668086.6049286578 0.03164612129764469 0.03165032874748515 9.109660431037324e-07 6.04049781135579 -0.06585816359590879 NAEQYKDQADK ddPTM_KYSE-520_SHP099_60min_R1 6 NAEQYKDQADK 11 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ;;;;; 213.73 1.2922e-09 11911790000.0 8237590.0 8987690.0 5201040.0 5146910.0 8590560.0 9275170.0 6529740.0 8019050.0 8276340.0 8065570.0 False True 7780634.461471446 8555907.881602278 5536307.360358234 5636070.778925085 9266588.198399752 9217280.223580373 7189829.843321182 7991233.787210343 6773565.285553055 7994115.324718499 0.9732952484952335 1.0702757633664188 0.6925478474446686 0.7050274545699716 1.159176196738951 1.1530081627769044 0.8993903079043161 0.9996395426646842 0.8473189352933905 1.0 22.930506954842024 NAFDLFKLT(ph)PEEK ddPTM_KYSE-520_SHP099_60min_R1 1 NAFDLFKLTPEEK 13 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 NAFDLFKLT(1)PEEK 97.095 0.0049339 112610000.0 140290.0 141490.0 110300.0 94155.0 97868.0 124210.0 92312.0 134150.0 124040.0 130340.0 True False 132507.8340388183 134692.6080191802 117410.11448623975 103103.46289126709 105569.65480725214 123434.75931664002 101643.79783830077 133684.66496084532 101517.46279394056 129185.28900298553 1.025719221294276 1.0426311622530595 0.9088504998702007 0.7981052926922997 0.8171956390855957 0.9554861878567875 0.7868062890345954 1.0348288570051951 0.7858283522638126 1.0 16.979082266676023 -4.822168963967498 4.678031763793528 0.8787721859189236 1.035165962541761 0.32769692223571467 0.08527203937439749 0.20034570342625307 8.660877128584037 0.021267093969835074 0.0486328178264624 1.506021028820025e-05 4.822168963967498 0.1563937766228375 NAFMMLIHADQDR ddPTM_KYSE-520_SHP099_60min_R1 1 NAFMMLIHADQDR 13 0 P53618;E9PP73 P53618 COPB1 Coatomer subunit beta 0 104.17 0.00073352 0.0 299570.0 241610.0 156130.0 160740.0 262640.0 264030.0 165670.0 185580.0 178840.0 193480.0 False True 282952.2549220101 230002.69293599657 166194.3896168326 176016.68127175688 283308.27378281637 262382.0908330446 182417.54038338742 184936.2662946974 146367.164189522 191765.91772516235 1.4755085693983194 1.1993929665105294 0.8666523832197404 0.9178725988422136 1.4773650977378154 1.3682415204201661 0.9512511010680585 0.9643854783400397 0.7632595297736612 1.0 17.54898680950549 -6.888823702407271 7.176883890893165 0.9099285818668815 1.1983895266387035 0.3432743259766865 0.20125510417175763 0.30652511057865184 18.16529642329935 0.09321015341444792 0.06268197673224005 1.291743537838027e-07 6.888823702407271 0.28846094477182194 NAHGHAQAGALLQVHQPPES(ph)PPADPDEAPAPVVEPLK ddPTM_KYSE-520_SHP099_60min_R1 1 NAHGHAQAGALLQVHQPPESPPADPDEAPAPVVEPLK 37 0 A6NN50;O75147-2;O75147-1;O75147-4;O75147 A6NN50 OBSL1 Obscurin-like protein 1 1 NAHGHAQAGALLQVHQPPES(1)PPADPDEAPAPVVEPLK 57.507 0.020797 819530000.0 36271.0 50774.0 30546.0 36720.0 38857.0 37880.0 38671.0 44871.0 63624.0 41700.0 True False 34258.975325554085 48334.74082667221 32515.04403532802 40209.85775972945 41914.82483391295 37643.57686912743 42580.24207258996 44715.35297397014 52071.48543051978 41330.57044210908 0.828901584446795 1.1694670629909099 0.7867068779239621 0.9728841709564743 1.0141361318160906 0.9107925795956301 1.0302360121603273 1.081895374190445 1.2598782178304384 1.0 15.334921655391652 -7.165013076614873 2.4793793341322665 1.1348954845903083 0.9547751405829423 0.2938146567654907 0.11498875178886316 0.3587223036661901 4.246822465801031 0.06541633055835053 0.03136360827288507 6.838910549991145e-08 7.165013076614873 -0.18012034400736598 NAIS(ph)LPVIGGPQALTLPTAQAPPKPPR ddPTM_KYSE-520_SHP099_60min_R1 2 NAISLPVIGGPQALTLPTAQAPPKPPR 27 1 O14613 O14613 CDC42EP2 Cdc42 effector protein 2 1 NAIS(1)LPVIGGPQALTLPTAQAPPKPPR;NAIS(1)LPVIGGPQALTLPTAQAPPKPPR 162.19 3.3788e-10 581260000.0 350540.0 442830.0 502270.0 343970.0 425990.0 385470.0 388280.0 489980.0 619740.0 518480.0 True False 331094.84741583484 421555.7820986182 534647.1278604142 376660.8053816488 459512.98944845435 383064.1387471638 427531.1316476236 488280.3737421912 507210.8383740469 513886.67057133606 0.644295457299419 0.820328306297447 1.0403989020886586 0.7329647312371026 0.8941912989055946 0.7454253256292394 0.8319560637217873 0.9501713153978562 0.9870091353218658 1.0 18.971090705778106 -7.333431080692758 3.2060601858053994 0.9876281720200787 0.8207553797101316 0.3672789478907591 0.09919416790444752 0.3097908686621848 6.186770965484582 0.0632572371636869 0.027403498113479294 4.640544261284746e-08 7.333431080692758 -0.16687279230994712 NAKPLSFK ddPTM_KYSE-520_SHP099_60min_R1 1 NAKPLSFK 8 1 Q00688 Q00688 FKBP3 Peptidyl-prolyl cis-trans isomerase FKBP3 0 98.249 0.0033082999999999997 287440000.0 604390.0 476640.0 372540.0 410940.0 630860.0 522390.0 411450.0 548780.0 580620.0 446810.0 False True 570863.2818784057 453741.4989487737 396554.52448507486 449995.6140463836 680505.0928976065 519129.5702392689 453043.38136503164 546876.4102662149 475194.0442390988 442851.61101292004 1.2890622223834498 1.0245903766973898 0.895456885835977 1.0161318212597743 1.5366435979336497 1.1722427046203598 1.0230139624620542 1.2348976421591022 1.073032213097753 1.0 18.756463841573016 -4.237325191674599 22.507951807977445 1.1189504568849915 1.2890629749560745 0.09033929400695562 0.16900821449200343 5017.464096934329 4682966.09903407 0.04469683432318354 2.1924669391900657 5.789949933317876e-05 4.237325191674599 0.17011251807108296 NALGPGLS(ph)PELGPLPALR ddPTM_KYSE-520_SHP099_60min_R1 1 NALGPGLSPELGPLPALR 18 0 Q8N1G4 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 NALGPGLS(1)PELGPLPALR 76.71300000000001 0.015312000000000001 0.0 22633.0 35117.0 28342.0 14956.0 29711.0 32592.0 26917.0 38556.0 30715.0 41635.0 True False 21377.502372233073 33429.92660830835 30168.970668803344 16377.413743314626 32049.086667534502 32388.581238611463 29638.033044604595 38422.25823503807 25137.930262140304 41266.14629153983 0.5180397079292034 0.8101053675361486 0.7310828216345568 0.396872865898608 0.7766435576782957 0.784870508861924 0.7182166426497846 0.931084234606981 0.6091659270663214 1.0 15.332671095682654 -5.9654762358199385 24.9999791506004 0.7967128852122288 0.6301878583647007 0.2879724908671122 0.1450587023060769 267.41650506690326 193645.44107454905 0.043764846497116525 0.04962448093368734 1.0827389599501497e-06 5.9654762358199385 -0.16652502684752812 NALPPVLTTVNGQS(ph)PPEHSAPAK ddPTM_KYSE-520_SHP099_60min_R1 10 NALPPVLTTVNGQSPPEHSAPAK 23 0 Q6PKG0;A0A0B4J210;H0YBM7 Q6PKG0 LARP1 La-related protein 1 1 NALPPVLT(0.002)T(0.002)VNGQS(0.992)PPEHS(0.003)APAK;NALPPVLTTVNGQS(0.997)PPEHS(0.003)APAK;NALPPVLTTVNGQS(1)PPEHSAPAK;NALPPVLTTVNGQS(1)PPEHSAPAK;NALPPVLTTVNGQS(1)PPEHSAPAK;NALPPVLTTVNGQS(1)PPEHSAPAK;NALPPVLTTVNGQS(1)PPEHSAPAK;NALPPVLTTVNGQS(0.998)PPEHS(0.001)APAK;NALPPVLTT(0.001)VNGQS(0.999)PPEHSAPAK;NALPPVLTTVNGQS(1)PPEHSAPAK 225.44 1.9347e-21 79947700000.0 9635430.0 10951850.0 8259110.0 7149320.0 7188620.0 9753740.0 7386140.0 9861920.0 11234950.0 10068490.0 True False 9100933.4901465 10425706.686937995 8791505.445643239 7828789.223278557 7754323.496347208 9692863.290693862 8132803.112979738 9827711.301309424 9194966.290041784 9979291.011766694 0.9119819714061336 1.0447342075348767 0.8809749545611082 0.7845035498060476 0.7770415240124772 0.9712977885167291 0.8149680276274395 0.9848105731881612 0.9214047650479273 1.0 23.250505890884487 -9.940426786525178 8.022203619320901 1.0000000409113297 0.8980433047689789 0.11585638996867442 0.0835934092022734 5.122545556189122e-10 1.58685475076685e-10 0.0854300691808115 0.020719835225665267 1.1470258710392268e-10 9.940426786525178 -0.10195673614235079 NALTTLAGPLT(ph)PPVK ddPTM_KYSE-520_SHP099_60min_R1 2 NALTTLAGPLTPPVK 15 0 H0Y3X6;A0A0C4DFX9;Q9H3P2;H7C2C7;C9JEM7;C9JHL4;H7C0W2 H0Y3X6 NELFA Negative elongation factor A 1 NALTTLAGPLT(1)PPVK;NALTTLAGPLT(1)PPVK 118.21 0.00066888 657270000.0 914080.0 1425390.0 1152190.0 960470.0 887120.0 1225290.0 940820.0 1298240.0 1433790.0 1135100.0 True False 863374.1602266965 1356912.1248459897 1226462.0109691827 1051752.7800241648 956931.296977657 1217642.5106117518 1035927.2671183597 1293736.7084514939 1173449.878904579 1125043.8970944379 0.7674137537712661 1.2060970495021393 1.0901459170941412 0.9348548823209866 0.8505724082847327 1.0823066671055779 0.9207883086106838 1.149943314916623 1.043025860533225 1.0 20.101549863108644 -7.257610747374562 24.98799295406643 1.072363438247266 0.989250536082942 0.08538844711025884 0.12412360040879795 884.7041783204547 5774166.191574616 0.060731989305810495 0.03333680823035773 5.525724810908962e-08 7.257610747374562 -0.08311290216432399 NAMS(ph)LPQLNEK ddPTM_KYSE-520_SHP099_60min_R1 7 NAMSLPQLNEK 11 0 Q9H3Q1;J3KRZ9 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK;NAMS(1)LPQLNEK 214.48 1.1317000000000001e-09 8246400000.0 9872540.0 10838860.0 8185650.0 7148170.0 7874600.0 8497950.0 7202910.0 8551830.0 9927230.0 9305330.0 True False 9324890.525779443 10318144.89613945 8713310.096503075 7827529.927624328 8494286.219654907 8444911.141895493 7931050.436427274 8522165.69774212 8124695.277103281 9222892.015637187 1.0110592761976742 1.1187537356661326 0.944748142093594 0.8487066653662368 0.9210002898497621 0.9156467545730075 0.8599309655778656 0.9240231462423063 0.8809270739945843 1.0 23.136787775770276 -4.90726062429532 5.436539543233542 0.9025219667169748 1.062921274567843 0.6395330097664826 0.04650897362780562 0.1059192569180577 4.910684784493096 0.011258499315331785 0.024204768070918033 1.2380533958051975e-05 4.90726062429532 0.1603993078508681 NAPAAVDEGSIS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 NAPAAVDEGSISPR 14 0 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;A0A090HNM7 A0A494C0S2 BIVM-ERCC5;ERCC5;ERCC5-201 DNA repair protein complementing XP-G cells 1 NAPAAVDEGS(0.005)IS(0.995)PR 117.4 0.00072005 485380000.0 1090200.0 952770.0 885200.0 830360.0 846110.0 1067000.0 834080.0 967650.0 1097400.0 829190.0 True False 1029724.4327401806 906997.4990630727 942261.4083700771 909277.1647431618 912694.0432926399 1060340.4572164465 918396.9462363482 964293.4480012072 898139.8232027596 821844.0217000593 1.2529438744472483 1.1036126991431607 1.146520974163593 1.1063865414050698 1.1105441168807788 1.290196715214933 1.1174832717485252 1.1733290290370164 1.0928348926173066 1.0 19.648505084313758 -8.043667067898593 3.0027853232455444 1.000135486547634 1.1592465839145758 0.41365402291324394 0.06035119092205471 0.27481891070490716 6.11063922925176 0.0570061641201042 0.015244175019729848 9.043424810669015e-09 8.043667067898593 0.15911109736694184 NAPLRT(ph)SIR ddPTM_KYSE-520_SHP099_60min_R1 3 NAPLRTSIR 9 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 NAPLRT(0.692)S(0.308)IR;NAPLRT(0.896)S(0.104)IR;NAPLRT(0.684)S(0.316)IR 111.86 0.0024934000000000002 2731160000.0 1105650.0 1145260.0 1177350.0 995210.0 1109250.0 987650.0 993150.0 1105000.0 1445080.0 1103490.0 True False 1044317.3904413687 1090239.9905296932 1253243.864826605 1089794.4591792033 1196541.6642308433 981485.7099998338 1093547.2942099439 1101167.0129089383 1182689.8995023177 1093713.9371022298 0.9548359539133824 0.9968237155487469 1.145860743209551 0.9964163591684576 1.0940170218558731 0.8973879519175352 0.9998476357604736 1.0068144654227003 1.081352133662873 1.0 20.060804017243754 NAPLRTS(ph)IR ddPTM_KYSE-520_SHP099_60min_R1 4 NAPLRTSIR 9 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 NAPLRT(0.19)S(0.81)IR;NAPLRT(0.191)S(0.809)IR;NAPLRT(0.294)S(0.706)IR;NAPLRT(0.23)S(0.77)IR 105.2 0.0010900999999999999 7471740000.0 1761470.0 1792710.0 1823280.0 1571790.0 1717530.0 1522310.0 1506300.0 1690310.0 2154520.0 1774580.0 True False 1663757.74769661 1706585.5206874323 1940811.5461511458 1721172.4490241057 1852689.8395910782 1512808.6986177766 1658571.5040713253 1684446.7091313188 1763313.4790293528 1758858.6018023489 0.9459303584675388 0.9702801117376059 1.1034494439532234 0.978573517655356 1.0533478004954906 0.8601081957739876 0.9429817168769242 0.9576930785710812 1.0025328228331936 1.0 20.746208075625756 -6.226465055583453 24.999947876822432 0.9494138082334262 1.0115025918287388 0.21151060743359995 0.0554568250827307 956.1741451705198 683481.7119560968 0.01851075040260575 0.01850985824025727 5.936561133203339e-07 6.226465055583453 0.06208878359531256 NAS(ph)AS(ph)FQELEDK ddPTM_KYSE-520_SHP099_60min_R1 4 NASASFQELEDK 12 0 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed 2 NAS(1)AS(1)FQELEDK;NAS(1)AS(1)FQELEDK;NAS(1)AS(1)FQELEDK;NAS(1)AS(1)FQELEDK 156.17 3.0648e-05 1831350000.0 6045820.0 5651730.0 5037070.0 5731780.0 5453840.0 5578410.0 5996840.0 6823200.0 6291200.0 6386250.0 True False 5710446.312556634 5380212.407380314 5361767.59179696 6276526.647877501 5883026.179895198 5543593.073983872 6603059.110718378 6799531.911746852 5148876.668246041 6329672.793427323 0.9021708544691776 0.8499985043408688 0.8470844807909459 0.9916036504122285 0.9294360659533746 0.8758103704413112 1.0431912242880765 1.0742311859796965 0.8134506847798815 1.0 22.593699492121413 -5.257427400903861 24.785732656331714 0.9627432668731244 0.8647759978806283 0.25821902577377087 0.07348954440439556 423.221281661131 2614621.528353816 0.020337238192677045 0.03365746017725903 5.528058103340216e-06 5.257427400903861 -0.09796726899249608 NAS(ph)AS(ph)FQELEDKK ddPTM_KYSE-520_SHP099_60min_R1 10 NASASFQELEDKK 13 1 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed 2 NAS(1)AS(1)FQELEDKK;NAS(1)AS(1)FQELEDKK;NAS(1)AS(1)FQELEDKK;NAS(1)AS(1)FQELEDKK;NAS(1)AS(1)FQELEDKK;NAS(1)AS(1)FQELEDKK;NAS(1)AS(1)FQELEDKK;NAS(1)AS(1)FQELEDKK;NAS(1)AS(1)FQELEDKK;NAS(1)AS(1)FQELEDKK 190.55 2.6848999999999998e-08 7193140000.0 21022600.0 19887890.0 18064380.0 22273290.0 20143670.0 20845680.0 21379680.0 23332200.0 22358380.0 23469640.0 True False 19856434.47048588 18932445.91206849 19228838.838829935 24390136.78489116 21728862.227195777 20715574.378807645 23540946.69996925 23251266.043976404 18298661.800893143 23261717.248703618 0.8536100004221522 0.8138885753640395 0.8266302368498424 1.0485097262649612 0.9341039612372871 0.8905436411820425 1.0120038193345848 0.9995507122446948 0.7866427747037005 1.0 24.471454268965037 -5.224984284152968 23.894194398435772 0.9520944212278182 0.8296274041885502 0.38446483010815846 0.07053393306126406 357.5874408422531 234376.66619731582 0.018793966357241253 0.03255023157804403 5.956836991897483e-06 5.224984284152968 -0.12246701703926799 NAS(ph)ASFQELEDK ddPTM_KYSE-520_SHP099_60min_R1 4 NASASFQELEDK 12 0 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed 1 NAS(0.985)AS(0.015)FQELEDK;NAS(0.998)AS(0.002)FQELEDK;NAS(0.905)AS(0.095)FQELEDK;NAS(0.976)AS(0.024)FQELEDK 246.18 1.6420000000000003e-15 2539840000.0 2366650.0 2136200.0 1899810.0 1974670.0 1986840.0 2217630.0 2103750.0 2196190.0 2429430.0 2075720.0 True False 2235367.20670019 2033573.7454984277 2022274.792403474 2162342.0430938154 2143193.004426787 2203788.948581918 2316417.580621425 2188571.929484601 1988306.7529464918 2057330.7356857255 1.0865376032770557 0.9884525177331882 0.9829604726774438 1.051042501619502 1.0417347912281314 1.0711884629708683 1.125933492579327 1.0637919764296584 0.9664497391975105 1.0 20.972342308922705 -3.8906922110539015 14.094900022567133 1.037831857322621 2.7780672944620086 0.09848923135685306 0.046598377157814265 717331.2520749177 1065783.9919361393 0.01248652397311987 38926373.96602131 0.00012861978786165256 3.8906922110539015 1.7402354371393876 NAS(ph)ASFQELEDKK ddPTM_KYSE-520_SHP099_60min_R1 9 NASASFQELEDKK 13 1 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed 1 NAS(0.97)AS(0.03)FQELEDKK;NAS(0.955)AS(0.045)FQELEDKK;NAS(0.976)AS(0.024)FQELEDKK;NAS(0.806)AS(0.194)FQELEDKK;NAS(0.992)AS(0.008)FQELEDKK;NAS(0.998)AS(0.002)FQELEDKK;NAS(0.997)AS(0.003)FQELEDKK;NAS(0.993)AS(0.007)FQELEDKK;NAS(0.997)AS(0.003)FQELEDKK 231.83 5.1338e-13 23151180000.0 18462310.0 17877510.0 14640440.0 15995170.0 16912570.0 16313430.0 16661880.0 17952490.0 19070940.0 18148100.0 True False 17438168.860597443 17018647.584910426 15584186.187932223 17515346.147676785 18243493.03964 16211611.832210382 18346225.43467833 17890217.002332658 15608138.0352747 17987321.953008138 0.969469991483704 0.9461468266021827 0.8663983570564809 0.9737606406020647 1.0142417580171805 0.9012799056225937 1.019953136025909 0.994601478145042 0.8677299531331538 1.0 24.10047707077219 NAS(ph)ASFQELEDKKELS(ph)EES(ph)EDEELQLEEFPMLK ddPTM_KYSE-520_SHP099_60min_R1 2 NASASFQELEDKKELSEESEDEELQLEEFPMLK 33 2 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed 3 NAS(0.919)AS(0.289)FQELEDKKELS(0.907)EES(0.885)EDEELQLEEFPMLK;NAS(0.791)AS(0.246)FQELEDKKELS(0.97)EES(0.993)EDEELQLEEFPMLK 142.27 4.9931e-06 332904000.0 157013.0 188385.0 144986.0 169429.0 157346.0 177506.0 141341.0 166003.0 238818.0 177572.0 True False 148303.17589234427 179334.7018283503 154332.029545802 185531.48121931375 169728.23502372464 176398.11921149248 155629.12763522883 165427.17433839157 195454.67131186137 175998.8502289254 0.8426371859784493 1.0189538260908289 0.8768922600633987 1.0541630299174627 0.9643712717608982 1.0022685885847988 0.8842621837176705 0.9399332673095134 1.1105451601395655 1.0 17.42520647844458 -4.249861795493752 23.929611946405835 0.9773768544040264 0.8426370379131967 0.27225442595861726 0.06843144773997235 1331.929576901253 2752860.8275087876 0.016417852477669175 0.2425643418984609 5.6252030621766146e-05 4.249861795493752 -0.13473981649082978 NAS(ph)ASFQELEDKKELSEESEDEELQLEEFPMLK ddPTM_KYSE-520_SHP099_60min_R1 1 NASASFQELEDKKELSEESEDEELQLEEFPMLK 33 2 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed 1 NAS(0.817)AS(0.171)FQELEDKKELS(0.006)EES(0.006)EDEELQLEEFPMLK 159.09 3.8035e-10 53880000.0 40976.0 52988.0 42589.0 35894.0 33573.0 36486.0 34664.0 29195.0 60787.0 31835.0 True False 38702.979596369114 50442.3769433905 45334.355084809344 39305.3549680754 36215.004095760356 36258.27734020551 38168.175408038565 29093.72935916421 49749.613115569686 31552.96666725522 1.2266035078259052 1.5986571873046151 1.4367699735776687 1.2456944344591658 1.1477527446997011 1.1491241924276276 1.2096540972056495 0.9220600289657347 1.576701602743378 1.0 14.945488035943463 -5.38090824613552 3.2701316465259276 1.166352939661527 1.4395566639789361 0.27771100867880993 0.1814899177592214 0.300511707028861 6.013319549525487 0.05027260615083882 0.07891030537292522 4.159984896609609e-06 5.38090824613552 0.273203724317409 NAS(ph)IHTLLDALER ddPTM_KYSE-520_SHP099_60min_R1 4 NASIHTLLDALER 13 0 F8U8C0;O00220 F8U8C0 TNFRSF10A Tumor necrosis factor receptor superfamily member 10A 1 NAS(0.953)IHT(0.047)LLDALER;NAS(0.989)IHT(0.011)LLDALER;NAS(0.986)IHT(0.014)LLDALER;NAS(0.997)IHT(0.003)LLDALER 127.22 3.8333e-05 163295000.0 516241.0 514877.0 442102.0 519076.0 522251.0 532323.0 510747.0 565425.0 618190.0 532420.0 True False 487604.08262908 490141.53607386735 470600.6023082107 568408.8269741104 563349.182498285 529000.5747018093 562378.291170363 563463.672646187 505942.27930172585 527703.1730164925 0.9240120347236205 0.9288205209608409 0.8917903593759571 1.077137406100732 1.0675493559722795 1.0024585823084984 1.06570951232993 1.0677663153421608 0.9587630038485925 1.0 19.009367132747823 -5.257364459236089 24.99692626280649 1.0384015130968318 0.9162689213124147 0.6819621485832017 0.03726077033782723 193.14257039248292 1184796.8918907235 0.010092966273458603 0.016687858857099 5.528859334822259e-06 5.257364459236089 -0.12213259178441715 NAS(ph)ILLEELDLEK ddPTM_KYSE-520_SHP099_60min_R1 6 NASILLEELDLEK 13 0 O75179-6;O75179-2;O75179;H0YM23;O75179-7;H0YLQ3 O75179-6 ANKRD17 Ankyrin repeat domain-containing protein 17 1 NAS(1)ILLEELDLEK;NAS(1)ILLEELDLEK;NAS(1)ILLEELDLEK;NAS(1)ILLEELDLEK;NAS(1)ILLEELDLEK;NAS(1)ILLEELDLEK 225.68 1.1493e-11 242098000.0 427833.0 451613.0 345455.0 316787.0 281996.0 412734.0 306278.0 429564.0 519289.0 470053.0 True False 404100.2506260587 429916.8335950673 367723.5820475431 346894.3412345157 304187.48086224176 410157.9740100967 337239.5692252257 428073.94274499157 424999.2078104045 465888.69611570024 0.8673750919376314 0.9227887200944246 0.7892949219704216 0.7445863016783024 0.6529187838176244 0.8803776039851303 0.7238629570473085 0.9188330738951485 0.9122333539186339 1.0 18.829625801114858 -7.40465824032771 5.680815076058762 0.9434763895534093 0.7976912107950879 0.42752551149894635 0.07805043012953618 0.24749690502769436 10.450101129687694 0.04708175171471108 0.021903524407951146 3.938598939895623e-08 7.40465824032771 -0.14578517875832142 NAS(ph)VPNLR ddPTM_KYSE-520_SHP099_60min_R1 4 NASVPNLR 8 0 E9PPF9;E9PLD2;Q9H019-3;Q9H019;E9PNJ0;E9PPQ0;E9PRW1;E9PSD6;C9JF50;E9PLU1;E9PRK5;Q9H019-2 E9PPF9 MTFR1L Mitochondrial fission regulator 1-like 1 NAS(1)VPNLR;NAS(1)VPNLR;NAS(1)VPNLR;NAS(1)VPNLR 146.71 0.000489 4534180000.0 2388610.0 2107530.0 1986470.0 1762050.0 1996950.0 1976890.0 1923190.0 2198970.0 2462480.0 1962610.0 True False 2256109.0417240146 2006281.0953329755 2114521.0346643794 1929514.7022203503 2154098.603908756 1964551.496219888 2117604.8137256424 2191342.2863134556 2015355.7060691947 1945222.8022874736 1.15982037588237 1.0313888429508953 1.0870328232723885 0.991924781033488 1.1073788572577166 1.0099364936035529 1.088618132193113 1.126525086862317 1.0360539181934576 1.0 20.891503977669934 -4.252030631669105 24.39308885579206 1.0577497807664262 1.1598204524699474 0.3329471089133149 0.044858810376411026 1067.2378686669038 2766839.191314998 0.010608534018262618 0.12776381781342513 5.597181220504598e-05 4.252030631669105 0.10207067170352113 NASAS(ph)FQELEDKK ddPTM_KYSE-520_SHP099_60min_R1 1 NASASFQELEDKK 13 1 F2Z3H0;F2Z3N9;H7C3L7;Q99543-2;Q99543 F2Z3H0 DNAJC2 DnaJ homolog subfamily C member 2;DnaJ homolog subfamily C member 2, N-terminally processed 1 NAS(0.086)AS(0.914)FQELEDKK 221.78 1.9304000000000003e-11 973720000.0 522150.0 499350.0 406920.0 477300.0 509530.0 478590.0 467500.0 466560.0 508770.0 439890.0 True False 493185.2986197806 475360.4764603686 433150.7142950202 522662.4484945229 549627.1121708741 475602.942286053 514759.4623603168 464941.6122559222 416390.1930479938 435992.9168292413 1.131177318674053 1.0902940348605383 0.9934810809430322 1.198786558955099 1.2606331225929943 1.0908501581743015 1.1806601494902835 1.0663971691035954 0.9550388939255978 1.0 18.733945171507052 -7.559596149821383 4.160406201238645 0.9806054048414908 1.1333584294640835 0.4552024432870574 0.0686873672090884 0.21045626011700638 8.01944047840392 0.05369635910552245 0.019285603506981483 2.7567910501375928e-08 7.559596149821383 0.15275302462259266 NAT(ph)SPQVQRPSFMDYFDK ddPTM_KYSE-520_SHP099_60min_R1 1 NATSPQVQRPSFMDYFDK 18 1 A0A087WZ06;Q13188;Q13188-2 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 NAT(0.817)S(0.183)PQVQRPSFMDYFDK 140.45 1.9566e-05 2284100000.0 623610.0 557020.0 493720.0 657960.0 615100.0 635650.0 751820.0 783780.0 809860.0 692990.0 True False 589017.1101642845 530259.9230959342 525545.9811799299 720492.320577112 663504.870559741 631682.6725676042 827821.3026561149 781061.2501156277 662809.8389092278 686850.6477380623 0.8575621382960569 0.7720163398581439 0.7651532147646054 1.0489796041538848 0.9660104023266141 0.9196798090645508 1.205242079020086 1.1371631557571065 0.9649984914362303 1.0 19.389636900711103 -5.264479630833072 24.93128382325495 1.0397631767133317 0.7956211338329533 0.628170373532818 0.08325112293816092 167.88464964414894 1376725.4331124453 0.02500256976469249 0.03895601801895558 5.4390164105561e-06 5.264479630833072 -0.24414204288037844 NAT(ph)SPQVQRPSFMDYFDKQDFK ddPTM_KYSE-520_SHP099_60min_R1 1 NATSPQVQRPSFMDYFDKQDFK 22 2 A0A087WZ06;Q13188;Q13188-2 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 NAT(0.5)S(0.5)PQVQRPSFMDYFDKQDFK 130.9 2.2151999999999997e-05 2363700000.0 1707200.0 1430700.0 1350700.0 1436300.0 1389500.0 1625900.0 1658600.0 1653500.0 2459300.0 1481500.0 True False 1612498.2127811743 1361967.0244755168 1437768.2831964125 1572805.52016066 1498845.7448264663 1615752.1550030173 1826267.4743760894 1647764.3944297999 2012753.1139079153 1468375.0625895602 1.0981514558940038 0.9275334750466363 0.9791560207109681 1.071119743335147 1.0207512937349736 1.1003674716142002 1.2437336487827342 1.1221686042010797 1.3707350153157154 1.0 20.485789087795634 -6.481579876067255 2.8740866548627566 1.1944164088023177 1.0143710238709807 0.38026643247538094 0.0981595582093191 0.25732411410110406 4.247166466260012 0.037194005293519156 0.030224805063349888 3.2992872136411973e-07 6.481579876067255 -0.18004538493133704 NATDLQNS(ph)SMSEEELTK ddPTM_KYSE-520_SHP099_60min_R1 2 NATDLQNSSMSEEELTK 17 0 Q5QNY5;P40855;H0YJ60;P40855-5 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 NATDLQNS(0.587)S(0.357)MS(0.055)EEELT(0.001)K;NATDLQNS(0.608)S(0.311)MS(0.081)EEELTK 99.663 0.00056287 826610000.0 1912490.0 2006500.0 1705590.0 1402010.0 1575160.0 1979390.0 1649980.0 1997700.0 2274040.0 2077600.0 True False 1806400.3672457044 1910104.728182097 1815535.0604404898 1535256.6088703214 1699116.1305655688 1967035.8927925623 1816776.080652997 1990770.4449666843 1861131.6598833655 2059194.0803483403 0.8772365773993132 0.9275982028167918 0.8816726299705405 0.7455618795342556 0.8251364680876222 0.9552455067566102 0.8822753027464341 0.966771643316845 0.9038155643728978 1.0 20.973648380625395 -6.264299266294635 24.978242465840527 0.9358356891313214 0.8514694429018693 0.4132763958718856 0.053503684038448074 302.9638343318716 2646074.3825793513 0.019825794437110526 0.01826316466914047 5.441275728741492e-07 6.264299266294635 -0.0843662462294521 NATDLQNSS(ph)MSEEELTK ddPTM_KYSE-520_SHP099_60min_R1 7 NATDLQNSSMSEEELTK 17 0 Q5QNY5;P40855;H0YJ60;P40855-5 Q5QNY5 PEX19 Peroxisomal biogenesis factor 19 1 NATDLQNS(0.151)S(0.846)MS(0.003)EEELTK;NATDLQNS(0.007)S(0.993)MSEEELTK;NATDLQNS(0.004)S(0.996)MSEEELTK;NATDLQNS(0.001)S(0.993)MS(0.006)EEELTK;NATDLQNS(0.063)S(0.925)MS(0.012)EEELTK;NATDLQNS(0.003)S(0.996)MS(0.002)EEELTK;NATDLQNS(0.063)S(0.937)MSEEELTK 465.58 1.2387999999999996e-136 5019790000.0 7484920.0 7747270.0 5973760.0 5253410.0 5289630.0 7368120.0 6233700.0 7444950.0 8521350.0 7907850.0 True False 7069716.566781899 7375079.520310656 6358838.127953953 5752692.506904688 5705893.787122296 7322132.830014654 6863863.231049208 7419125.206114394 6974087.645752549 7837792.601214212 0.902003526565206 0.9409638523948856 0.8113047195161629 0.7339684525479143 0.7279975469417693 0.9342085460235738 0.8757393286964336 0.9465835068109661 0.8898025248425354 1.0 22.902015967071836 -6.306250586313593 24.99302334163078 0.9225828200387721 0.8241638977104445 0.37116004189305074 0.06871918286870907 599.1468000569558 334166.52490425284 0.026952827372851144 0.023770254066925785 4.940255538126634e-07 6.306250586313593 -0.09841892232832761 NATS(ph)PQVQRPSFMDYFDK ddPTM_KYSE-520_SHP099_60min_R1 1 NATSPQVQRPSFMDYFDK 18 1 A0A087WZ06;Q13188;Q13188-2 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 NAT(0.043)S(0.957)PQVQRPSFMDYFDK 135.64 5.9437e-06 2143600000.0 1438000.0 1318700.0 988150.0 1407400.0 1308500.0 1457700.0 1720000.0 1973800.0 2042000.0 1486300.0 True False 1358231.2734180684 1255347.672590946 1051847.7300959018 1541158.8728497599 1411471.5056534244 1448601.9535936387 1893874.385582341 1966953.348488382 1671224.2746309785 1473132.5383239016 0.9220020860875388 0.8521620695577423 0.7140211099353432 1.0461780136926833 0.9581429158162281 0.9833480124210865 1.2856103142879123 1.3352181812006807 1.1344697311027163 1.0 20.490455805387437 -6.3496649666133615 1.4238268105620493 1.2124694572735668 0.8682407511966342 0.5520847923366587 0.11982806251811022 0.28833545610582273 1.1756144477975172 0.05808887609596255 0.04888506560564427 4.470283159787886e-07 6.3496649666133615 -0.34422870607693257 NATS(ph)PQVQRPSFMDYFDKQDFK ddPTM_KYSE-520_SHP099_60min_R1 1 NATSPQVQRPSFMDYFDKQDFK 22 2 A0A087WZ06;Q13188;Q13188-2 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 NAT(0.165)S(0.815)PQVQRPS(0.02)FMDYFDKQDFK 97.839 0.0013141 1246300000.0 166250.0 210430.0 181110.0 172920.0 209120.0 205350.0 160380.0 210920.0 326860.0 211380.0 True False 157027.7810888413 200320.62693813047 192784.6403862458 189354.26480970628 225576.55426996085 204068.33447928505 176592.77555796297 210188.36774909825 267510.4634700696 209507.3376511516 0.7495096966498928 0.9561508880022244 0.9201808516475418 0.9038073173599199 1.0767000182378619 0.9740390802878561 0.8428954209327297 1.0032506264724752 1.27685486565391 1.0 17.676641247275747 -2.1828612177494215 0.2917863419275991 1.056730643634901 8.659348056143447e-15 0.35674020601730916 0.10742247330192581 34.8250019112035 0.9152729891609505 0.12047888206854909 16.60461915003606 0.006563549762388875 2.1828612177494215 -1.0567306436348924 NAVALS(ph)ASPQLK ddPTM_KYSE-520_SHP099_60min_R1 1 NAVALSASPQLK 12 0 A0A2R8YD63;Q92547 A0A2R8YD63 TOPBP1 DNA topoisomerase 2-binding protein 1 1 NAVALS(0.63)AS(0.37)PQLK 112.15 0.0016444000000000003 77725000.0 507060.0 568450.0 429250.0 383080.0 446660.0 601690.0 443670.0 513720.0 628550.0 593750.0 True False 478932.3710009496 541140.8087391552 456920.141824283 419487.8080227979 481809.6008522416 597934.6295244273 488520.4934019284 511938.02522314887 514421.16445607366 588489.8369305099 0.8138328666795701 0.9195414683143529 0.7764282629034375 0.7128208198306267 0.8187220417693206 1.0160492025540837 0.8301256245137397 0.8699182094517626 0.8741377202692756 1.0 19.166657974940023 -6.033722401705755 24.74111564842121 0.905861538617892 0.8059614102405378 0.3641523912428515 0.07179651052429768 714.5730104556256 524259.1650323129 0.024464473454374462 0.02448014648611434 9.252894241215776e-07 6.033722401705755 -0.09990012837735418 NAVALSAS(ph)PQLK ddPTM_KYSE-520_SHP099_60min_R1 2 NAVALSASPQLK 12 0 A0A2R8YD63;Q92547 A0A2R8YD63 TOPBP1 DNA topoisomerase 2-binding protein 1 1 NAVALSAS(1)PQLK;NAVALS(0.001)AS(0.999)PQLK 204.67 1.479e-08 2821600000.0 4340800.0 5049400.0 3527200.0 2987300.0 3340000.0 4881700.0 3228300.0 4349800.0 5104200.0 4635200.0 True False 4100007.170829734 4806819.2446960835 3754568.9557195427 3271212.093835501 3602838.997999566 4851231.499525329 3554648.0691717844 4334711.559050957 4177405.94641109 4594135.734131028 0.8924436299018584 1.0462945639557348 0.8172525090684357 0.7120408022629406 0.7842256316532268 1.0559617260509457 0.773735970133268 0.9435314518130709 0.9092909282971454 1.0 22.13136205121739 -8.098342454775944 0.925604813036822 0.9991504208014412 0.8701861535989939 0.11568251695218146 0.10674937235583166 1.682902794130682 3.1663710710148947 0.10769908306325934 0.03684386967175683 7.973656915340575e-09 8.098342454775944 -0.12896426720244736 NAVASVQNGPGGGPSSSSIGS(ph)ASKSDESSTEETDKSR ddPTM_KYSE-520_SHP099_60min_R1 1 NAVASVQNGPGGGPSSSSIGSASKSDESSTEETDKSR 37 2 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y815 A0A0C4DG98 THOC2 THO complex subunit 2 1 NAVASVQNGPGGGPSSSSIGS(0.364)AS(0.364)KS(0.27)DESSTEETDKSR 141.36 6.7241e-07 936730000.0 165100.0 193210.0 139220.0 135010.0 135070.0 136480.0 114190.0 110090.0 182340.0 110770.0 True False 155941.57388130948 183927.90158587767 148194.34395987607 147841.3098077634 145699.24055682702 135628.17769531452 125733.43958700458 109708.12348519907 149231.65241734195 109788.66397775592 1.4203795567901667 1.6752904618927047 1.3498146219349336 1.3465990426636147 1.3270882008942824 1.2353568463388342 1.1452315296639297 0.9992664042931321 1.3592628511043499 1.0 16.744369573703707 -5.677941625557687 0.5649894286882573 1.095301286815423 1.5880188354608713 0.6152279209709524 0.11944560765935208 0.7226296898118383 0.45699945379993573 0.08512915646567185 0.19275896856067848 2.0992220255456873e-06 5.677941625557687 0.49271754864544826 NAVEEYVYEMR ddPTM_KYSE-520_SHP099_60min_R1 3 NAVEEYVYEMR 11 0 P34932;A0A087WYC1 P34932 HSPA4 Heat shock 70 kDa protein 4 0 ;; 122.7 0.0019412 318230000.0 288494.0 363903.0 412824.0 297737.0 304727.0 337431.0 238648.0 269558.0 342850.0 295829.0 False True 272490.6627214693 346420.5536504613 439435.29558175465 326033.8349621066 328707.2812405433 335324.96796532604 262772.8688200317 268622.9662133099 280597.0825451671 293208.185211479 0.9293419367707384 1.1814832297420428 1.4987142847489336 1.1119533880916448 1.1210712995732375 1.1436412244885656 0.8961989537587582 0.9161509799583637 0.956989254385187 1.0 18.161565852803424 -6.690918276852506 5.053836403110483 0.9354134909704499 1.1791482964092046 0.3955801905324846 0.13399131292921562 0.21318677438525885 10.111963974525052 0.05585323513113063 0.04215706748754045 2.037425433150285e-07 6.690918276852506 0.2437348054387547 NCAS(ph)PSSAGQLILPECMK ddPTM_KYSE-520_SHP099_60min_R1 1 NCASPSSAGQLILPECMK 18 0 P53992;G5EA31;P53992-2 P53992 SEC24C Protein transport protein Sec24C 1 NCAS(0.84)PS(0.143)S(0.016)AGQLILPECMK 143.04 5.136e-05 0.0 126090.0 139480.0 108840.0 109490.0 96518.0 137490.0 117100.0 119870.0 146610.0 120690.0 True False 119095.53634581667 132779.17143625158 115856.00055015736 119895.89668063111 104113.41748770131 136631.87391067392 128937.61078586754 119454.19894786832 119989.31973733983 119620.78049539911 0.9956090894290508 1.1100008784958444 0.9685273751797118 1.002299902944059 0.8703622987287376 1.1422085138119384 1.0778863860600438 0.9986074196570118 1.0030808964831566 1.0 16.86810851040641 -6.284443029276673 24.998943692812478 1.0463651929885807 0.9956236718970031 0.13760245803774518 0.0678490562339929 1942.3957341155572 2110868.187187794 0.024944851246155385 0.02201459168867167 5.194658125308943e-07 6.284443029276673 -0.05074152109157759 NCEEVGLFNELAS(ph)PFENEFKK ddPTM_KYSE-520_SHP099_60min_R1 2 NCEEVGLFNELASPFENEFKK 21 1 C9JCI8;E9PEK8;H7C2N6;B8ZZU6;E9PBF9;P15336-3;P15336-7;P15336-4;P15336-5;P15336 C9JCI8 ATF2 Cyclic AMP-dependent transcription factor ATF-2 1 NCEEVGLFNELAS(1)PFENEFKK;NCEEVGLFNELAS(1)PFENEFKK 160.47 3.7226e-09 272010000.0 205123.0 209184.0 200994.0 197025.0 196058.0 217903.0 195607.0 247404.0 280569.0 219011.0 True False 193744.418287437 199134.48664841446 213950.39484177064 215750.1967622736 211486.64918257462 216542.98654998618 215380.86450035192 246545.81326852774 229624.74216892212 217070.7329279799 0.8925404897937939 0.9173714206533943 0.9856252473830982 0.9939165628277286 0.9742752803656033 0.9975687815170882 0.9922151254347649 1.1357856028906814 1.0578337257704262 1.0 17.727805698750185 -4.688059964698991 0.41017071371439423 1.0590978802891255 0.8143727185055653 0.5951226498869033 0.040668422361024824 2.824430068176372 0.48415402348419306 0.036539030292201936 0.32842907802439036 2.0508789865751565e-05 4.688059964698991 -0.2447251617835603 NCGEIFCNACSDNELPLPS(ph)SPKPVR ddPTM_KYSE-520_SHP099_60min_R1 1 NCGEIFCNACSDNELPLPSSPKPVR 25 1 H0YD93;Q8WXA3;Q8WXA3-3;Q8WXA3-1 H0YD93 RUFY2 RUN and FYVE domain-containing protein 2 1 NCGEIFCNACSDNELPLPS(0.568)S(0.432)PKPVR 98.236 0.0019355 828320000.0 237190.0 270930.0 190250.0 182460.0 177230.0 199910.0 151320.0 209200.0 265560.0 228220.0 True False 224032.59787345742 257914.11612577923 202513.81941076278 199800.94354140086 191176.9926992404 198662.28753715078 166616.9023408836 208474.33402764722 217340.99822282183 226198.14835247333 0.9904263120861562 1.1402132068909976 0.8952938867350743 0.8833005265368529 0.8451748791565649 0.878266639157387 0.7365971098987634 0.9216447417721211 0.9608434012649394 1.0 17.787227593978347 -4.830317636968418 7.581195749115059 0.878858649883814 1.0646052834444955 0.46229482124647603 0.07484921901453248 0.16751921468735256 15.640805693146243 0.01937737192418136 0.0409037356063632 1.4780269842911383e-05 4.830317636968418 0.18574663356068144 NCHHVIAR ddPTM_KYSE-520_SHP099_60min_R1 1 NCHHVIAR 8 0 H0YIM9;H0YID9;A0A0C4DGJ7;H0YHA3;B4DL54;Q8WUH1;Q8WUH1-2 H0YIM9 CHURC1-FNTB;CHURC1 Protein Churchill 0 69.825 0.039379000000000004 26229000.0 63528.0 44927.0 34395.0 34731.0 59261.0 47430.0 37105.0 46523.0 50237.0 35396.0 False True 60003.97520007172 42768.63948319816 36612.156733945805 38031.8237977441 63924.50355103363 47133.97177673483 40855.93550990278 46361.622571549844 41115.2271717123 35082.41897767128 1.7103716604679435 1.2190903800111073 1.0436041128534537 1.0840707370250042 1.822123599621774 1.3435211467810682 1.1645700809829032 1.321505868824421 1.1719610098118003 1.0 15.098460606430525 -8.059980335223415 0.9781362201891445 1.0007844242884862 1.3404969056835114 0.1755319808839909 0.23775098375879644 1.2781061118528656 2.7202931768898875 0.23820278351384105 0.08002884628251489 8.710030279247646e-09 8.059980335223415 0.3397124813950252 NCLTNFHGMDLTR ddPTM_KYSE-520_SHP099_60min_R1 2 NCLTNFHGMDLTR 13 0 P61247;H0Y8L7;E9PFI5;D6RG13;D6RB09;D6RAT0;D6RAS7;D6RED7 P61247 RPS3A 40S ribosomal protein S3a 0 ; 160.78 1.8643e-06 1246970000.0 528040.0 460500.0 352180.0 356470.0 496380.0 439560.0 300930.0 477600.0 370530.0 416600.0 False True 498748.568578357 438376.8887754077 374882.0863079233 390348.8016233863 535442.2819841399 436816.5429934967 331350.94119377603 475943.3170726784 303251.09230118344 412909.2481098956 1.2078890721421074 1.0616785426388267 0.9079043107509875 0.9453622155721131 1.2967553631582314 1.0578996353146302 0.8024788563359742 1.1526584092057108 0.734425527375142 1.0 18.655465205987635 -6.55682408450542 24.273033075111197 0.9344087463080372 1.0764184570941278 0.21076561587439424 0.14864615954605787 248.70092735661243 177834.14006596472 0.056624472068473014 0.043861429357562355 2.774443694335608e-07 6.55682408450542 0.1420097107860906 NCPAVTLTS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 1 NCPAVTLTSPAK 12 0 Q9UGU0;Q9UGU0-2 Q9UGU0 TCF20 Transcription factor 20 1 NCPAVTLT(0.001)S(0.999)PAK 185.95 1.0472000000000001e-07 1694300000.0 2891100.0 3592800.0 2736700.0 2065900.0 2356600.0 3327400.0 2330800.0 3279500.0 3603200.0 3529800.0 True False 2730724.9197350377 3420196.495097259 2913112.060874823 2262242.514864515 2542051.012780172 3306632.46236364 2566420.010415887 3268124.1799410563 2948949.709280286 3498528.7181428433 0.7805352305881925 0.9776099528240643 0.8326677570968225 0.6466268243370037 0.7266057298879606 0.9451494410252921 0.7335712287016022 0.9341424476503669 0.8429113912907094 1.0 21.73831690358145 -8.148160797681408 0.797890581468214 0.9976193416053055 0.8089754417483543 0.24443160837228572 0.09895279740980675 1.2770551240074983 1.7635850052673998 0.100941143224033 0.03658067105436291 7.109502353475501e-09 8.148160797681408 -0.18864389985695118 NCPHIVVGT(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 4 NCPHIVVGTPGR 12 0 Q13838-2;Q13838;Q5STU3;A0A0G2JJZ9;F6WLT2;F6TRA5;A0A140T9X9;F6S4E6;A0A0A0MT12;F6UJC5;A0A140T996;A0A140TA18;A0A140T9X3;A0A140T9L4;A0A140T973;A0A140T9K1 Q13838-2 DDX39B Spliceosome RNA helicase DDX39B 1 NCPHIVVGT(1)PGR;NCPHIVVGT(1)PGR;NCPHIVVGT(1)PGR;NCPHIVVGT(1)PGR 127.3 0.00040417 1570590000.0 1956020.0 1843370.0 1632380.0 1485420.0 1737860.0 1718040.0 1565090.0 1595950.0 1969730.0 1720700.0 True False 1847515.6713708015 1754811.7382452213 1737605.8267003475 1626593.870192193 1874619.6949292005 1707317.0750854209 1723304.5710064343 1590414.021947529 1612076.6848525354 1705455.936684344 1.0832972178470013 1.0289399453244346 1.018851199450223 0.9537589539572213 1.0991897560096073 1.00109128495263 1.010465608602466 0.9325447745308076 0.9452467520132173 1.0 20.701726050309972 -7.044527148204855 2.7963451000382546 0.9546038162803224 1.0297046449035416 0.3667818782381056 0.04152294992187158 0.2919979761427548 4.513426870130864 0.021865799763366573 0.012003828055694027 9.025532861522921e-08 7.044527148204855 0.0751008286232192 NCPHVVVGT(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 7 NCPHVVVGTPGR 12 0 O00148;K7EQN7;O00148-3;O00148-2;A0A0D9SEM9;K7EPJ3 O00148 DDX39A ATP-dependent RNA helicase DDX39A 1 NCPHVVVGT(1)PGR;NCPHVVVGT(1)PGR;NCPHVVVGT(1)PGR;NCPHVVVGT(1)PGR;NCPHVVVGT(1)PGR;NCPHVVVGT(1)PGR;NCPHVVVGT(1)PGR 155.64 4.3475e-05 3368890000.0 3396980.0 3058970.0 3068120.0 2816270.0 2990400.0 3046830.0 2811920.0 2931300.0 3454780.0 2922540.0 True False 3208542.747688255 2912012.4895924213 3265895.924365566 3083927.4540575515 3225727.4669514718 3027813.603805796 3096176.315294591 2921132.004470562 2827479.039916556 2896648.569301715 1.1076741520155229 1.005304033238112 1.1274739914869494 1.064653643780123 1.1136067734060975 1.0452816526982769 1.0688822759196415 1.008452331921904 0.9761208418176066 1.0 21.46595323215815 -7.294180996500139 2.061450758447922 0.9861170169467961 1.0774028593730798 0.5528642439857607 0.03384581885073056 0.25090252339843916 1.9899054717450395 0.02345218800878897 0.009340356016712827 5.079477062356703e-08 7.294180996500139 0.09128584242628368 NCPPS(ph)PLPLISK ddPTM_KYSE-520_SHP099_60min_R1 4 NCPPSPLPLISK 12 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 NCPPS(1)PLPLISK;NCPPS(1)PLPLISK;NCPPS(1)PLPLISK;NCPPS(1)PLPLISK 130.98 6.4303e-05 1102380000.0 1567960.0 2018780.0 1398680.0 1234270.0 1299620.0 2194060.0 1784640.0 2641190.0 2674910.0 2955590.0 True False 1480982.1331492309 1921794.7785494437 1488841.150767127 1351574.6497031918 1401892.7001737119 2180366.057694768 1965048.8276079497 2632028.328348383 2189213.772993705 2929405.7720142216 0.5055571840875177 0.6560357042063321 0.5082399867545215 0.4613818483650582 0.4785587280418952 0.744303188900859 0.6708011728456477 0.8984854039318131 0.747323499498818 1.0 21.482176613933238 -7.058348449207119 0.8181816893750741 0.9364490710210129 0.5229978080709751 0.7525162708005739 0.08703639398949987 0.3204012356889703 0.3978622834161461 0.07744909350377001 0.03796878156772918 8.742820275945114e-08 7.058348449207119 -0.41345126295003787 NCPS(ph)PVLIDCPHPNCNK ddPTM_KYSE-520_SHP099_60min_R1 4 NCPSPVLIDCPHPNCNK 17 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 NCPS(1)PVLIDCPHPNCNK;NCPS(1)PVLIDCPHPNCNK;NCPS(1)PVLIDCPHPNCNK;NCPS(1)PVLIDCPHPNCNK 208.27 4.7705e-18 9057400000.0 11047300.0 9920930.0 8737110.0 8591270.0 9208150.0 9945110.0 9691390.0 10638310.0 10970310.0 10287680.0 True False 10434484.246753423 9444313.631180467 9300318.090470282 9407781.717740485 9932779.017793324 9883038.879538756 10671090.280051652 10601408.185610227 8978378.243010266 10196539.158893922 1.0233358676068 0.9262273683265044 0.9121053668840263 0.9226445925561475 0.9741323858036152 0.9692542465173867 1.0465404107965204 1.0397065141816435 0.8805319239301781 1.0 23.281576229590655 -6.1287560120273215 2.482276375655648 0.9943056726487602 0.9430080257474295 0.1131883007770913 0.05157221396452666 0.5587497269298907 6.734057659417586 0.019035516913595698 0.019165946535046552 7.43436685607329e-07 6.1287560120273215 -0.05129764690133076 NCPS(ph)PVLIDCPHPNCNKK ddPTM_KYSE-520_SHP099_60min_R1 3 NCPSPVLIDCPHPNCNKK 18 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 NCPS(1)PVLIDCPHPNCNKK;NCPS(1)PVLIDCPHPNCNKK;NCPS(1)PVLIDCPHPNCNKK 133.95 6.6002e-06 11487930000.0 1473520.0 1316270.0 1275020.0 1146330.0 1255450.0 1212400.0 1169300.0 1086500.0 1520570.0 1179800.0 True False 1391780.9082107055 1253034.4134384512 1357209.829304129 1255276.8585433168 1354246.7724666346 1204832.9618830562 1287504.2552682753 1082731.1850910075 1244472.8184503545 1169347.8898705107 1.1902197115734534 1.0715668316442661 1.1606553028922995 1.0734845202331718 1.1581213633665504 1.0303460350165552 1.101044664655656 0.9259273433254369 1.0642451482835984 1.0 20.15727277577559 -6.681734934673743 1.2000325054181484 0.9998395265191042 1.1277366420929065 0.4808872720275099 0.054921219327592405 0.38852377445989783 1.1321259190770125 0.03205069939069691 0.019705948906564658 2.0809663871884896e-07 6.681734934673743 0.12789711557380223 NCS(ph)AST(ph)SQER ddPTM_KYSE-520_SHP099_60min_R1 1 NCSASTSQER 10 0 Q66PJ3-4;Q66PJ3-3;H7BZV4;A0A0C4DG62;F8WEP2 Q66PJ3-4 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 2 NCS(0.995)AS(0.13)T(0.655)S(0.22)QER 94.402 0.010827 169250000.0 368170.0 283900.0 288920.0 359930.0 313600.0 355640.0 415710.0 317770.0 397130.0 305580.0 True False 347746.87617130106 270261.0178574122 307544.2454883448 394137.63898309943 338278.53586007963 353420.3188420406 457734.0237386256 316667.73003807536 325021.2028326154 302872.7989376424 1.148161463792916 0.8923251569813486 1.0154237903406578 1.3013305927953183 1.116899692037801 1.1668935608668023 1.5113078009784136 1.0455469462719005 1.0731277419849548 1.0 18.208352489678315 -5.170918937048221 8.51391050146521 1.186789090327737 1.0046973776332577 0.1780055526342239 0.1499144152635273 0.5189287432136416 44.760772160018554 0.04072356574983226 0.07077327855887844 6.746539430356419e-06 5.170918937048221 -0.1820917126944792 NCS(ph)ASTSQER ddPTM_KYSE-520_SHP099_60min_R1 1 NCSASTSQER 10 0 Q66PJ3-4;Q66PJ3-3;H7BZV4;A0A0C4DG62;F8WEP2 Q66PJ3-4 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCS(0.709)AS(0.015)T(0.03)S(0.246)QER 122.46 0.0010918 1548000000.0 458270.0 433350.0 509610.0 341200.0 375610.0 452120.0 384380.0 338950.0 447960.0 403350.0 True False 432848.8495614042 412531.21552838926 542460.2760048293 373627.5454144792 405168.3700714424 449298.15137460135 423236.8815872912 337774.2615615247 366621.7561526407 399776.6328015516 1.0827267379988905 1.0319042727371437 1.3569084120884716 0.9345907558332637 1.0134868744881527 1.1238729693279301 1.0586833918264182 0.8449074654375691 0.917066496817064 1.0 18.608834622541018 -7.141538171707392 5.494982402436043 0.9119516919993773 1.0893931212190013 0.32831949751050116 0.108778046632344 0.26082351059272946 10.629746426550572 0.05274825081444485 0.03000653156698172 7.218747119783616e-08 7.141538171707392 0.17744142921962403 NCSAST(ph)SQER ddPTM_KYSE-520_SHP099_60min_R1 1 NCSASTSQER 10 0 Q66PJ3-4;Q66PJ3-3;H7BZV4;A0A0C4DG62;F8WEP2 Q66PJ3-4 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCS(0.007)AS(0.082)T(0.813)S(0.099)QER 158.86 0.00030118 1158500000.0 766350.0 737490.0 746170.0 618400.0 590840.0 716750.0 688340.0 603330.0 728740.0 687510.0 True False 723839.03781915 702059.8734049416 794269.3121142123 677172.550071261 637335.7465802595 712276.4973850865 757924.124751018 601237.1890482804 596419.186040441 681419.1962746861 1.0622521962638751 1.0302907186106554 1.1656104149347082 0.9937679386981736 0.9353064164681146 1.0452838741249102 1.1122729281690094 0.882330865251874 0.8752603233091473 1.0 19.37818306463626 -7.271659403836448 24.95466067646891 0.9090966849570876 1.0463312629877806 0.44244641537370455 0.06655962682261014 658.1212301996804 1606952.3909619737 0.037254920358300275 0.01821869363759413 5.349837568123466e-08 7.271659403836448 0.13723457803069294 NCSASTS(ph)QER ddPTM_KYSE-520_SHP099_60min_R1 7 NCSASTSQER 10 0 Q66PJ3-4;Q66PJ3-3;H7BZV4;A0A0C4DG62;F8WEP2 Q66PJ3-4 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCS(0.012)AS(0.007)T(0.03)S(0.951)QER;NCSAS(0.003)T(0.006)S(0.991)QER;NCSAS(0.001)T(0.005)S(0.993)QER;NCSAST(0.006)S(0.994)QER;NCSAS(0.005)T(0.022)S(0.973)QER;NCS(0.013)AS(0.004)T(0.025)S(0.958)QER;NCS(0.001)AS(0.008)T(0.052)S(0.939)QER 139.48 0.00025024 3468455000.0 2195330.0 1887347.0 1940894.0 1799076.0 1884750.0 2022821.0 1998062.0 1791007.0 2269460.0 1907551.0 True False 2073550.6686181414 1796676.0171543988 2066007.1327801987 1970059.6421280748 2033069.1022394288 2010195.8238116505 2200045.606165944 1784794.414741174 1857383.272430959 1890651.5821922228 1.0967386525093354 0.9502946148708908 1.0927487392386968 1.0420003667961804 1.0753272159654461 1.0632291230945976 1.1636441250666487 0.9440102193084636 0.9824037860414826 1.0 20.85045209075205 -7.296830016335317 24.998387323621145 0.9724052350281932 1.0644442114860384 0.4031618228247559 0.05196749390842344 641.9264956964406 453425.39498565777 0.028060700403478144 0.013480719675370853 5.0485886159114586e-08 7.296830016335317 0.0920389764578452 NCSASTS(ph)QGRK ddPTM_KYSE-520_SHP099_60min_R1 2 NCSASTSQGRK 11 1 Q66PJ3;Q66PJ3-2;F5GYV5;A0A0A0MTG7;F8WCT1;Q66PJ3-6;Q66PJ3-5;A0A0C4DH18 Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 NCS(0.001)AS(0.003)T(0.009)S(0.987)QGRK;NCS(0.006)AS(0.023)T(0.066)S(0.905)QGRK 48.527 0.05709500000000001 465570000.0 147374.0 120762.0 115247.0 127247.0 103925.0 163317.0 162708.0 116045.0 187405.0 173037.0 True False 139198.87043721438 114960.41225254239 122676.00602171979 139340.51662179446 112103.30624763628 162297.67802363492 179156.11251705314 115642.46698010663 153376.9760956018 171504.02680074875 0.8116361640822224 0.6703073647716853 0.7152951934139905 0.8124620699645645 0.6536482456932426 0.9463199264247617 1.0446175279907246 0.6742842668904714 0.894305393037758 1.0 17.387882924754837 -6.268303717441282 24.95470350288432 0.8998426997634882 0.7326728736670943 0.4263172782939433 0.10348743802133716 585.3752540320617 2128074.4632121343 0.036564043400360804 0.03293733492640028 5.391334556159808e-07 6.268303717441282 -0.16716982609639386 NCSEEKS(ph)PQTSILK ddPTM_KYSE-520_SHP099_60min_R1 4 NCSEEKSPQTSILK 14 1 Q8ND24 Q8ND24 RNF214 RING finger protein 214 1 NCS(0.012)EEKS(0.988)PQTSILK;NCSEEKS(0.999)PQT(0.001)SILK;NCSEEKS(1)PQTSILK;NCSEEKS(0.993)PQT(0.007)SILK 157.54 2.5557e-07 2682760000.0 2719870.0 2555340.0 2154420.0 2179610.0 2246740.0 2389170.0 2146890.0 2285160.0 2986660.0 2360500.0 True False 2568993.3891735757 2432577.630756462 2293297.3603938813 2386759.47907636 2423545.6557980664 2374258.3038123883 2363918.5928272544 2277233.313320355 2444357.831571674 2339587.8064412107 1.098053846109464 1.0397462425044435 0.9802142728219538 1.020162386085822 1.0358857441151421 1.0148190622620468 1.01039960386144 0.97334808595378 1.0447814033061793 1.0 21.157822944438344 -4.3688554537890125 3.252286959903437 1.0104100476708526 1.1015269399891285 0.6165302079822028 0.021087982578084554 0.17572176463268022 2.99667940993763 0.005304184434520442 0.033865138220230434 4.277052155703246e-05 4.3688554537890125 0.09111689231827591 NCVAIAADRR ddPTM_KYSE-520_SHP099_60min_R1 2 NCVAIAADRR 10 1 P49720;A0A087WXQ8;A0A087WY10;A0A087WUL2 P49720 PSMB3 Proteasome subunit beta type-3 0 ; 166.69 0.00013867 802108000.0 563179.0 518274.0 375991.0 322052.0 474283.0 480723.0 337504.0 438880.0 426119.0 408814.0 False True 531938.3382004976 493375.33909486583 400227.98146687075 352659.72525153524 511606.3737988704 477722.62944185757 371622.1980416175 437357.6277153616 348746.5311858361 405192.2260124791 1.3128048961731928 1.2176327861721385 0.9877484210532325 0.8703516568471233 1.2626263312937154 1.1790024555583272 0.9171503651458809 1.0793830671911555 0.8606940330960235 1.0 18.628246969403026 -4.627474075724162 4.154936695680952 1.028207837561414 1.2930018312223086 0.3998073933544415 0.12212734373468845 0.21838415810705925 6.625620807007224 0.03286065447817419 0.09854222142902373 2.35790294170964e-05 4.627474075724162 0.2647939936608945 NCWPPVLSGGIS(ph)PCIIIETPHK ddPTM_KYSE-520_SHP099_60min_R1 1 NCWPPVLSGGISPCIIIETPHK 22 0 O96020;O96020-2;Q8WUE3 O96020 CCNE2 G1/S-specific cyclin-E2 1 NCWPPVLSGGIS(1)PCIIIETPHK 161.24 1.3634e-09 157260000.0 93543.0 135940.0 108930.0 105620.0 120120.0 102250.0 94509.0 101400.0 159590.0 85026.0 True False 88353.98331665249 129409.23834989987 115951.80209416231 115658.09304418898 129572.7606106911 101611.81982228822 104062.89203895444 101048.26706693802 130612.47893651231 84272.73578922708 1.0484290380418282 1.535600299883023 1.3759112126627422 1.3724259923572342 1.5375406932885511 1.2057496279274424 1.2348346243229142 1.1990623790791353 1.5498782342035824 1.0 16.362778340447328 -6.302869220776118 24.86121188004484 1.2501544593182126 1.3829812448863827 0.12481366171586972 0.17790342882369148 1042.234013699235 625420.4898472801 0.05999778478318249 0.05291370473128891 4.978869912618973e-07 6.302869220776118 0.13282678556817018 NCWQNYLDFHR ddPTM_KYSE-520_SHP099_60min_R1 4 NCWQNYLDFHR 11 0 A0A494C160;P14854 A0A494C160 COX6B1 Cytochrome c oxidase subunit 6B1 0 ;;; 207.88 2.6287e-09 2141950000.0 1615810.0 1734730.0 1311290.0 1469750.0 2399220.0 1763030.0 1448370.0 1218180.0 1472760.0 1112950.0 False True 1526177.798262623 1651390.966917183 1395817.8515381813 1609434.598103549 2588024.964305544 1752026.275807226 1594785.3743290082 1213954.4179053488 1205343.9092583347 1103090.1288619973 1.3835476887433522 1.4970589652731643 1.265370630211492 1.4590236608897245 2.34615911845343 1.5882893246580891 1.4457434914899185 1.1005033824006065 1.0926975754028616 1.0 20.073119241622518 -7.178079653492507 2.6396944365357493 1.0542716978380096 1.5965282387487785 0.4245932901072458 0.27402795760879123 0.3167213507228011 4.262231176153812 0.1786634143458474 0.08633757421677993 6.636213451490713e-08 7.178079653492507 0.5422565409107689 NDADEKHPEHAEQNIR ddPTM_KYSE-520_SHP099_60min_R1 1 NDADEKHPEHAEQNIR 16 1 A0A0A0MRK1;E9PAV9;Q5T3I0;Q5T3I0-3;F8W895 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 0 225.68 1.0307e-17 720990000.0 496940.0 443390.0 353390.0 320320.0 475760.0 478200.0 385950.0 470350.0 436300.0 362700.0 False True 469373.7475746702 422088.8788580416 376170.0848439918 350763.11649228 513199.60529589024 475215.3764207163 424965.5925090147 468718.4656305148 357078.91822796117 359486.76017632976 1.305677425628806 1.174143043963581 1.0464087318806368 0.9757330598774464 1.4275897255413905 1.3219273393757844 1.1821453237959787 1.3038545992642578 0.9933020010328405 1.0 18.455579111917267 -7.776933997193738 24.77629561070334 0.9966506837373412 1.2113461603422724 0.3244957801670455 0.12705226511210704 322.78628348234736 516126.9420829815 0.12977517363828647 0.03401051672099965 1.6713446010785954e-08 7.776933997193738 0.21469547660493116 NDDIS(ph)ELEDLSELEDLKDAK ddPTM_KYSE-520_SHP099_60min_R1 3 NDDISELEDLSELEDLKDAK 20 1 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 NDDIS(0.999)ELEDLS(0.001)ELEDLKDAK;NDDIS(1)ELEDLSELEDLKDAK;NDDIS(1)ELEDLSELEDLKDAK 213.05 6.923100000000001e-19 424865000.0 474810.0 501210.0 434025.0 411476.0 436760.0 522550.0 428863.0 493240.0 569880.0 482280.0 True False 448471.34278973105 477131.1192684518 462002.94596455304 450582.5553252295 471130.5271755363 519288.57161991956 472216.6573395347 491529.06556308124 466404.15750573075 478007.3744081621 0.9382100921455435 0.9981668585326844 0.9665184486673983 0.9426267866329714 0.985613512257755 1.086361004917276 0.9878857160398477 1.0282876203984528 0.9757258621442866 1.0 18.866673349839527 -6.007304389483736 24.88786670299458 1.0179404704539061 0.9643432535636564 0.3921598597269217 0.0317788762143366 331.4626457209075 1129379.445676641 0.009778557642440915 0.010646290794405107 9.833216710472366e-07 6.007304389483736 -0.053597216890249766 NDDISELEDLS(ph)ELEDLKDAK ddPTM_KYSE-520_SHP099_60min_R1 8 NDDISELEDLSELEDLKDAK 20 1 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 NDDISELEDLS(1)ELEDLKDAK;NDDISELEDLS(1)ELEDLKDAK;NDDISELEDLS(1)ELEDLKDAK;NDDISELEDLS(1)ELEDLKDAK;NDDISELEDLS(1)ELEDLKDAK;NDDISELEDLS(1)ELEDLKDAK;NDDISELEDLS(1)ELEDLKDAK;NDDISELEDLS(1)ELEDLKDAK 234.37 2.6296e-26 1261869000.0 2077823.0 1894355.0 1761795.0 1660546.0 1772266.0 1947288.0 1712560.0 1841585.0 2301150.0 1911862.0 True False 1962562.0161525395 1803347.3423151758 1875363.1246716678 1818363.79257864 1911733.251385841 1935134.25328219 1885682.27777494 1835196.9714641692 1883319.1672708497 1894924.3900861263 1.0356941028466782 0.9516724528693262 0.989677020615282 0.959597017217132 1.0088704654326344 1.0212197718317595 0.9951227012752915 0.9684803156609102 0.9938756275047211 1.0 20.853708853486232 -5.794137450312105 24.999971052447783 0.9973764648525321 0.9822335881216236 0.06893193339825421 0.024330335537721574 525.3908428445246 401696.0410549475 0.0075463716375266604 0.008557305818859573 1.6064327509774195e-06 5.794137450312105 -0.015142876730908417 NDEELNK ddPTM_KYSE-520_SHP099_60min_R1 6 NDEELNK 7 0 A0A0U1RRH7;A0A0U1RR32;A0A3B3IS11;P20671;P04908;Q7L7L0;Q96QV6;P0C0S8;Q93077;Q9BTM1-2;Q96KK5;Q99878;Q16777;Q6FI13;Q9BTM1;Q8IUE6;H0YFX9;P16104 A0A0U1RRH7;P16104 HIST1H2AD;HIST1H2AB;HIST3H2A;HIST1H2AA;HIST1H2AG;HIST1H2AC;H2AFJ;HIST1H2AH;HIST1H2AJ;HIST2H2AC;HIST2H2AA3;HIST2H2AB;H2AFX Histone H2A type 1-D;Histone H2A type 1-B/E;Histone H2A type 3;Histone H2A type 1-A;Histone H2A type 1;Histone H2A type 1-C;Histone H2A.J;Histone H2A type 1-H;Histone H2A type 1-J;Histone H2A type 2-C;Histone H2A type 2-A;Histone H2A type 2-B;Histone H2A;Histone H2AX 0 ;;;;; 127.02 0.016612000000000002 13958000000.0 12549900.0 14829300.0 11847200.0 11550300.0 13316900.0 14694600.0 11899700.0 12586100.0 14466200.0 13276000.0 False True 11853732.029394595 14116878.168766897 12610889.4681902 12648037.03927568 14364864.267203724 14602885.550714884 13102637.805880338 12542441.756717818 11839502.743225591 13158384.968571696 0.9008500707120809 1.072842769267241 0.9583918921897202 0.961215002409873 1.0916890105825037 1.1097779541785198 0.9957633734820415 0.9531900599256644 0.8997686852530759 1.0 23.64947909091265 -7.203612837928185 4.068267839700346 0.9440191386346435 1.0189223254498 0.1584182281387969 0.06536368724959153 0.37943733226485865 12.866781641415486 0.03483925392241272 0.01853622120988083 6.257302662302824e-08 7.203612837928185 0.07490318681515662 NDHQEDFWK ddPTM_KYSE-520_SHP099_60min_R1 5 NDHQEDFWK 9 0 A6NKB8;Q9H4A4 A6NKB8 RNPEP Aminopeptidase B 0 ;;;; 172.27 0.00012226 5657260000.0 8789200.0 8349900.0 5178300.0 4626480.0 7823800.0 8026100.0 5955490.0 6732110.0 6454020.0 6655410.0 False True 8301645.555164184 7948758.270544587 5512101.503572945 5066179.268198066 8439488.548667366 7976006.13276938 6557529.049181274 6708757.881696284 5282132.660604229 6596448.245230631 1.258502340432436 1.2050057811477115 0.8356165770812055 0.7680162232548431 1.2793988878438167 1.2091364680282601 0.9940999770478763 1.017025773915054 0.8007540519132127 1.0 22.653258006183094 -4.614538065074926 7.86174429213035 0.9995750668680655 1.2450756916594534 0.2815494181546617 0.15583318581251063 0.30819285570102223 22.452390534221678 0.043020541716969826 0.11488488829189064 2.4291925186435457e-05 4.614538065074926 0.2455006247913879 NDHSAYKR ddPTM_KYSE-520_SHP099_60min_R1 2 NDHSAYKR 8 1 Q7L576;A0A0G2JR96;A0A0G2JQT1;A0A087WTQ3;A0A087WWZ1;E7EVJ5;Q96F07-2;Q96F07 Q7L576 CYFIP1;CYFIP2 Cytoplasmic FMR1-interacting protein 1;Cytoplasmic FMR1-interacting protein 2 0 ; 117.89 0.0019737 751130000.0 454880.0 819040.0 237338.0 131605.0 971000.0 1504540.0 294150.0 303870.0 319760.0 1419730.0 False True 429646.8996192009 779692.088995896 252637.18723422688 144112.69963151382 1047412.1757657423 1495149.6077792246 323885.55262735253 302815.9458937914 261699.64449363446 1407152.2967332269 0.30533077380227236 0.5540921837714293 0.17953791343036324 0.10241442945875762 0.744348837149583 1.0625357406233056 0.2301709298839001 0.21519770574712735 0.18597819518269845 1.0 20.42434704988957 -5.7602078298018355 24.999998819138533 0.5411299159380881 0.2969825984489799 0.1651406375023774 0.31154598824985513 79.80472918757333 1619979.7006226033 0.10158081296614677 0.12394482766003426 1.7369694104070544e-06 5.7602078298018355 -0.24414731748910823 NDIS(ph)PPGR ddPTM_KYSE-520_SHP099_60min_R1 2 NDISPPGR 8 0 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 NDIS(1)PPGR;NDIS(1)PPGR 76.068 0.015831 885590000.0 2151700.0 1940680.0 1913680.0 1944650.0 2019660.0 2016090.0 1676750.0 1876620.0 2353900.0 2085200.0 True False 2032340.91169239 1847446.819779933 2037038.8747962613 2129468.9513196587 2178595.7517065294 2003506.8344793844 1846252.2535030164 1870110.4432264029 1926491.096990139 2066726.7502610497 0.9833621747217834 0.8938998924490529 0.9856353165888821 1.0303582469480708 1.0541285883251617 0.9694106074866066 0.8933218933126089 0.9048658430487668 0.9321460114390073 1.0 20.978916226543 -6.57265772945757 7.836343297694273 0.9252753268878592 0.988737231088583 0.24039842941237266 0.04702396405171245 0.3463470625930971 47.14518760432009 0.01944896260956746 0.01506385066412235 2.6751138541926435e-07 6.57265772945757 0.06346190420072384 NDKS(ph)EEEQS(ph)S(ph)SSVKKDETNVK ddPTM_KYSE-520_SHP099_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 3 NDKS(0.998)EEEQS(0.97)S(0.685)S(0.201)S(0.145)VKKDETNVK 150.26 5.0972e-07 1245100000.0 4297900.0 3884100.0 3611200.0 3850300.0 3779000.0 3821700.0 3648700.0 4207700.0 4847800.0 3682500.0 True False 4059486.919348762 3697502.0058470364 3843983.730124293 4216231.354365095 4076385.800431251 3797847.352712364 4017546.203880399 4193104.4707845664 3967561.723093074 3649875.914941648 1.112226008213121 1.0130486876856333 1.0531820313090694 1.1551711489985 1.1168559960473128 1.04054149818216 1.1007350105886076 1.1488348011007938 1.0870401667220801 1.0 21.799415986757563 -5.117883247889757 18.361625741690325 1.0985771615565583 1.0547875535139783 0.07653407226557052 0.04932657580038977 5.443381291317866 824.1535937751902 0.01303245879750235 0.02257328069611405 7.622839085376694e-06 5.117883247889757 -0.04378960804257992 NDKS(ph)EEEQS(ph)SS(ph)SVKKDETNVK ddPTM_KYSE-520_SHP099_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 3 NDKS(1)EEEQS(0.953)S(0.145)S(0.475)S(0.368)VKKDET(0.06)NVK 56.533 0.022808000000000002 1712200000.0 778050.0 886100.0 653930.0 778360.0 742450.0 829250.0 617040.0 811910.0 834920.0 662130.0 True False 734890.0154957771 843530.425936783 696083.3741249942 852335.1003775336 800876.5910373592 824074.3431553305 679416.4249300752 809093.673711218 683319.5746204199 656264.0433293448 1.1198084413821434 1.2853521909525962 1.060675777075396 1.2987685506179574 1.2203572619556742 1.2557054611352072 1.035279064632696 1.2328782628506374 1.0412265940303806 1.0 19.32391686452172 -7.88236832448767 0.8852091376368046 0.9968628547709083 1.2008940271454367 0.34300704996518516 0.08863488218244665 0.6368484743823353 1.1211174024394555 0.08001011592538956 0.028776723045520015 1.3110874960666519e-08 7.88236832448767 0.2040311723745284 NDKS(ph)EEEQS(ph)SSS(ph)VKKDETNVK ddPTM_KYSE-520_SHP099_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 3 NDKS(0.982)EEEQS(0.97)S(0.053)S(0.046)S(0.948)VKKDETNVK 118.43 6.5608e-05 2498800000.0 2246400.0 2113400.0 2034900.0 1996000.0 1954400.0 1868000.0 1889400.0 2145900.0 2425700.0 1768400.0 True False 2121787.71391262 2011869.0917219282 2166072.909955117 2185699.2398807197 2108200.160985138 1856341.1191005842 2080398.990767022 2138456.373756823 1985254.026920846 1752733.3517943793 1.2105593310816032 1.1478466417394613 1.2358256934733267 1.247023249510878 1.2028071234148912 1.0591121103504622 1.1869455149222734 1.2200694256017641 1.1326617507953627 1.0 20.741175100901053 -6.039385137313051 24.68017161597746 1.1369611214526099 1.2098292387635636 0.314188590108298 0.06335954322598847 685.9556624052187 429843.2707090107 0.020881230383401377 0.02088526938198211 9.133029547329858e-07 6.039385137313051 0.07286811731095377 NDKS(ph)EEEQS(ph)SSSVKK ddPTM_KYSE-520_SHP099_60min_R1 1 NDKSEEEQSSSSVKK 15 2 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKS(0.994)EEEQS(0.297)S(0.284)S(0.251)S(0.174)VKK 55.383 0.034579 275690000.0 406000.0 354590.0 258920.0 348020.0 370360.0 351730.0 390840.0 384800.0 353470.0 305640.0 True False 383478.37065906543 337554.96414955886 275610.39748664765 381095.7161639718 399505.22493985604 349534.7226023807 430349.92143081495 383465.2186129953 289288.7582535811 302932.2673843216 1.265888160314587 1.1142918747619328 0.9098086508459944 1.2580228559161262 1.3187938953793095 1.153837871483449 1.420614334506803 1.2658447445167793 0.9549618492326822 1.0 18.208635732054976 -3.414521434798852 4.50723115870006 1.1729864249962962 41.88849693684818 0.03158197754617298 0.15780262159341718 13832.08123970367 494.81968607600965 0.03992402051391935 5804455.08897083 0.0003850158115816792 3.414521434798852 40.71551051185188 NDKS(ph)EEEQSSS(ph)SVKK ddPTM_KYSE-520_SHP099_60min_R1 1 NDKSEEEQSSSSVKK 15 2 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKS(0.924)EEEQS(0.141)S(0.142)S(0.43)S(0.363)VKK 85.06200000000001 0.0022279 138050000.0 409870.0 360490.0 331470.0 372490.0 361520.0 408180.0 393030.0 398550.0 440140.0 373400.0 True False 387133.69404441206 343171.51929347875 352837.08657075214 407891.3376067983 389969.567232576 405632.39721331646 432761.30800315615 397167.5230722694 360221.67102648324 370091.9665008038 1.0460472776665126 0.9272601146632384 0.9533767779582046 1.1021350759471629 1.0537098951909538 1.0960313487713478 1.169334509189397 1.0731589956611682 0.9733301547514159 1.0 18.49752429417319 -5.25809781657758 24.990080000173474 1.0748056128830046 0.9707312576567989 0.3307494131194125 0.0585981709549181 305.4809161399444 2284548.42722005 0.016367965725604252 0.02698900095833139 5.519531083328006e-06 5.25809781657758 -0.10407435522620567 NDKS(ph)EEEQSSSS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 2 NDKSEEEQSSSSVK 14 1 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKS(1)EEEQS(0.032)S(0.017)S(0.217)S(0.734)VK;NDKS(1)EEEQS(0.08)S(0.054)S(0.214)S(0.652)VK 71.148 0.013868 295670000.0 730800.0 636100.0 532970.0 647020.0 667370.0 647610.0 722380.0 765070.0 815660.0 671580.0 True False 690261.067186318 605540.8011944349 567326.0989821512 708512.5862663431 719888.2221841232 643568.0257712672 795405.220149403 762416.1507386811 667556.7051153296 665630.3236813343 1.0370036379484049 0.9097253830706384 0.8523140830551382 1.0644235412050405 1.081513561766102 0.966855028797292 1.1949654212721799 1.1454047744130154 1.0028940710263037 1.0 19.34436163331872 -5.3445437447628645 7.978747928982609 1.0736724648880538 0.9309524590938454 0.37729274334232665 0.07726840134564716 0.3012452815373418 26.131734492645524 0.022237452466616583 0.033054100423734877 4.523308985381403e-06 5.3445437447628645 -0.1427200057942084 NDKS(ph)EEEQSSSS(ph)VKKDETNVK ddPTM_KYSE-520_SHP099_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKS(0.991)EEEQS(0.013)S(0.132)S(0.156)S(0.708)VKKDETNVK 138.92 2.8607e-06 1718200000.0 3375600.0 3040100.0 2791200.0 2770000.0 2956700.0 2889900.0 2627200.0 2834500.0 3979000.0 2503800.0 True False 3188348.7389082303 2894049.0327168666 2971125.2180779 3033259.9671691353 3189375.468678238 2871863.062146023 2892783.01500112 2824667.781077276 3256513.9024273534 2481618.2799269245 1.2847861271404386 1.1661942757780164 1.197253115884281 1.2222911120957953 1.2851998611052118 1.1572541536205116 1.1656841176582173 1.1382362081731818 1.3122541563979966 1.0 21.24284978793154 -10.96858505285978 2.7374085013611817 0.8282225300799534 1.209399183277432 0.5483118079057934 0.05820889369622492 11883383.473084573 12187921.692411082 13012629.125440737 0.014517364048986995 1.0750160470776094e-11 10.96858505285978 0.3811766531974786 NDKS(ph)EEEQSSSSVK ddPTM_KYSE-520_SHP099_60min_R1 16 NDKSEEEQSSSSVK 14 1 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(0.831)EEEQS(0.056)S(0.056)S(0.056)SVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(0.724)EEEQS(0.001)S(0.018)S(0.238)S(0.018)VK;NDKS(1)EEEQSSSSVK;NDKS(0.971)EEEQS(0.001)S(0.013)S(0.013)S(0.001)VK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK;NDKS(0.724)EEEQS(0.001)S(0.018)S(0.251)S(0.005)VK;NDKS(1)EEEQSSSSVK;NDKS(0.997)EEEQS(0.003)SSSVK;NDKS(1)EEEQSSSSVK;NDKS(1)EEEQSSSSVK 301.04 4.2878999999999996e-33 141870500000.0 56244590.0 49559870.0 46415140.0 49159230.0 49318930.0 47851390.0 48793940.0 53083790.0 61205070.0 45948760.0 True False 53124590.4718895 47178939.454318576 49407134.19124981 53831308.43893858 53200049.20467395 47552731.72543807 53726507.63816378 52899654.72233966 50091772.1422568 45541689.73399429 1.1665045979230544 1.0359505703430711 1.08487705396601 1.182022642404429 1.1681615134487013 1.0441582647282113 1.179721436599661 1.1615654805810394 1.099910267599626 1.0 25.440684485014774 NDKS(ph)EEEQSSSSVKK ddPTM_KYSE-520_SHP099_60min_R1 13 NDKSEEEQSSSSVKK 15 2 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(1)EEEQSSSSVKK;NDKS(0.993)EEEQS(0.003)S(0.002)S(0.002)SVKK;NDKS(0.973)EEEQS(0.003)S(0.021)S(0.003)SVKK;NDKS(0.968)EEEQS(0.03)S(0.002)SSVKK;NDKS(0.998)EEEQS(0.002)SSSVKK;NDKS(0.932)EEEQS(0.02)S(0.041)S(0.008)SVKK;NDKS(1)EEEQSSSSVKK;NDKS(1)EEEQSSSSVKK;NDKS(0.999)EEEQSSSSVKK;NDKS(0.986)EEEQS(0.013)SSSVKK;NDKS(0.918)EEEQS(0.041)S(0.041)SSVKK;NDKS(0.951)EEEQS(0.017)S(0.031)S(0.001)SVKK;NDKS(0.978)EEEQS(0.014)S(0.008)SSVKK 187.43 3.3648000000000004e-11 67666000000.0 24434370.0 22462480.0 21403388.0 20221450.0 20960150.0 19370650.0 18836050.0 19873740.0 28731500.0 17894940.0 True False 23078946.787391003 21383348.74393014 22783084.63711165 22143290.52819938 22609594.55806008 19249750.588172212 20740181.756132703 19804802.634505793 23514583.862174343 17736404.75365265 1.3012189960672895 1.20561912298074 1.2845379293917885 1.2484655619758096 1.2747563484309772 1.0853242726211412 1.1693565885646273 1.116618779824991 1.325780742420852 1.0 24.080210262929516 -6.244767928362091 24.339708646549994 1.148576031096571 1.2601342591700717 0.36859847169228943 0.08033404878804133 689.9290755815796 1007271.6704189923 0.025149908902979055 0.025075475557308647 5.691569869973397e-07 6.244767928362091 0.1115582280735008 NDKSEEEQS(ph)S(ph)SS(ph)VKKDETNVK ddPTM_KYSE-520_SHP099_60min_R1 2 NDKSEEEQSSSSVKKDETNVK 21 3 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 3 NDKS(0.418)EEEQS(0.637)S(0.607)S(0.607)S(0.721)VKKDET(0.009)NVK;NDKS(0.217)EEEQS(0.965)S(0.71)S(0.183)S(0.924)VKKDETNVK 113.93 8.4075e-05 4614800000.0 6175000.0 5328800.0 5061100.0 5286300.0 5095200.0 5108500.0 5107100.0 5589900.0 6605100.0 4986000.0 True False 5832460.440442678 5072796.449308129 5387346.604046312 5788708.362615957 5496163.252277661 5076615.956598142 5623375.508492775 5570509.941592474 5405780.34102109 4941827.9190492965 1.180223297124583 1.0265020418363795 1.0901526099845913 1.1713698771869787 1.1121721238191165 1.0272749354604755 1.1379140675490365 1.1272164941478016 1.0938827554442745 1.0 22.23661334432585 NDKSEEEQS(ph)S(ph)SSVKK ddPTM_KYSE-520_SHP099_60min_R1 1 NDKSEEEQSSSSVKK 15 2 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKS(0.002)EEEQS(0.876)S(0.4)S(0.375)S(0.347)VKK 56.93600000000001 0.040172 864330000.0 1144000.0 925160.0 995770.0 963370.0 1123400.0 1138000.0 1167300.0 1217800.0 1410000.0 1115700.0 True False 1080540.0394925387 880713.9249065297 1059958.927488332 1054928.3951522491 1211805.1887283574 1130897.3198803347 1285302.0757501544 1213575.736036656 1153979.5432074836 1105815.7660014646 0.9771429135973339 0.7964382060595103 0.9585312129533593 0.9539820534181568 1.0958472703912892 1.0226814941964184 1.1623112233222148 1.0974483936188053 1.043554974243291 1.0 20.07667961528013 -5.52821376477466 1.8057190453420455 1.079528473041247 0.8927639634634751 0.5721242239470277 0.0627655381415578 0.22542225394082252 1.4801647941781153 0.019899029726988586 0.031938727437773165 2.963372424260437e-06 5.52821376477466 -0.18676450957777202 NDKSEEEQS(ph)SS(ph)SVKKDETNVK ddPTM_KYSE-520_SHP099_60min_R1 1 NDKSEEEQSSSSVKKDETNVK 21 3 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKSEEEQS(0.996)S(0.053)S(0.774)S(0.177)VKKDETNVK 103.53 0.0017578 4714800000.0 950620.0 1006000.0 873200.0 853090.0 971330.0 777990.0 868830.0 902520.0 1097500.0 653210.0 True False 897887.2135860116 957670.2499632157 929487.8691693981 934167.4171091389 1047768.1448882985 773134.2758292629 956659.8153636667 899389.368769752 898221.6657235554 647423.0675896894 1.3868631788619805 1.4792031639041758 1.4356730794746257 1.442901039326539 1.6183670266632075 1.1941716545682988 1.4776424617140134 1.3891833853219278 1.3873797686381049 1.0 19.304349243914036 -12.176003428730835 0.2897650830287855 1.1054082643855651e-09 1.4570859224744208 0.6314839291098877 0.09832707908083915 46.78608523561622 1.1597008567379907 28.329363628065884 0.10478861144308912 6.668015048319616e-13 12.176003428730835 1.4570859213690126 NDKSEEEQS(ph)SSS(ph)VKKDETNVK ddPTM_KYSE-520_SHP099_60min_R1 4 NDKSEEEQSSSSVKKDETNVK 21 3 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 2 NDKS(0.094)EEEQS(0.879)S(0.121)S(0.111)S(0.795)VKKDETNVK;NDKSEEEQS(0.876)S(0.124)S(0.209)S(0.791)VKKDETNVK;NDKS(0.071)EEEQS(0.67)S(0.272)S(0.271)S(0.714)VKKDET(0.002)NVK;NDKSEEEQS(0.967)S(0.034)S(0.17)S(0.829)VKKDETNVK 191.18 7.336800000000001e-13 26119500000.0 9815200.0 8485600.0 7764600.0 8012500.0 8186000.0 8557000.0 7843000.0 8568400.0 10954100.0 8097400.0 True False 9270731.289883895 8077939.038854723 8265118.5397992525 8774005.59095404 8830191.628031282 8503592.588942021 8635846.980303677 8538678.220279597 8965111.570389422 8025663.335681873 1.1551358314105309 1.0065135679116308 1.029836188499556 1.0932436639779115 1.1002444606382251 1.0595501248021815 1.0760290606645488 1.063921804733183 1.1170555249347163 1.0 22.936189207858064 -1.007508046512541 6.5984376664576265 1.070388153750379 1.0832400304518637 0.0 0.04652289648426768 0.0 0.0 0.010109175617621396 0.0 0.09828606626053757 1.007508046512541 0.012851876701484688 NDKSEEEQS(ph)SSSVK ddPTM_KYSE-520_SHP099_60min_R1 1 NDKSEEEQSSSSVK 14 1 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(0.416)EEEQS(0.546)S(0.019)S(0.019)SVK 233.43 4.4197e-18 2600400000.0 1334200.0 1148200.0 1110000.0 1161000.0 1172200.0 1088000.0 1163500.0 1238300.0 1479200.0 1085000.0 True False 1260189.2663382385 1093038.748516664 1181552.3760627934 1271341.090932623 1264445.4710943406 1081209.388426893 1281117.9346657284 1234004.6263213921 1210614.5675975226 1075387.744117227 1.171846409104014 1.0164136187119432 1.0987221888349823 1.182216459028229 1.175804241782864 1.0054135304605363 1.1913079181661894 1.1474973869396028 1.1257470379591334 1.0 20.036425504166193 -5.012509064803931 24.25814615623359 1.1263431335455603 1.0849894966451266 0.008724370777240198 0.0728490503089564 1270.9051759230106 2464613.471319721 0.01878691216796204 0.034807044135550115 9.716076715014342e-06 5.012509064803931 -0.0413536369004337 NDKSEEEQS(ph)SSSVKK ddPTM_KYSE-520_SHP099_60min_R1 2 NDKSEEEQSSSSVKK 15 2 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(0.414)EEEQS(0.578)S(0.005)S(0.003)SVKK;NDKS(0.001)EEEQS(0.729)S(0.088)S(0.061)S(0.122)VKK 134.83 1.1457e-05 6927490000.0 1090166.0 1059120.0 996966.0 983186.0 1191911.0 1036420.0 906222.0 1083243.0 1435070.0 1009815.0 True False 1029692.3187879585 1008238.2854284681 1061232.0235620013 1076627.7018343494 1285707.614654092 1029951.3183395223 997831.7636344188 1079485.4828638157 1174497.4631707547 1000868.8247241813 1.0287984732382092 1.0073630634926787 1.060310799324232 1.0756931130620895 1.2845915297725516 1.0290572479598967 0.9969655752934462 1.0785484133360828 1.173477916543581 1.0 19.932821474246545 -5.028334530596419 2.923422801713944 1.0955361242680726 1.0188966863194222 0.11192634379047817 0.08126691714320629 0.5830080017496969 9.995403103182717 0.023748301480005656 0.051574106514937684 9.36840094895937e-06 5.028334530596419 -0.07663943794865036 NDKSEEEQSSS(ph)SVK ddPTM_KYSE-520_SHP099_60min_R1 2 NDKSEEEQSSSSVK 14 1 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKS(0.035)EEEQS(0.153)S(0.012)S(0.788)S(0.012)VK;NDKSEEEQSS(0.056)S(0.627)S(0.317)VK 212.39 1.4655e-13 507250000.0 628350.0 528110.0 483310.0 552170.0 595360.0 524160.0 587480.0 615390.0 677000.0 545940.0 True False 593494.1729153298 502738.80289072916 514464.93592334125 604648.0707840365 642211.444864977 520888.52301272 646868.2116522766 613255.355723105 554073.8657811813 541103.3963348932 1.096822117427649 0.9290993298064242 0.9507701104964694 1.1174353642567327 1.1868553204709646 0.9626413852526218 1.1954613776845058 1.1333422777918702 1.023970408491505 1.0 19.04554477112611 -5.266201332362069 24.86592873495917 1.0973924507137878 0.9859173987922445 0.2138922337061303 0.08313401741988488 484.09656741507865 2527856.5754934154 0.02266128829200001 0.03491504696034966 5.417496852073773e-06 5.266201332362069 -0.11147505192154328 NDKSEEEQSSS(ph)SVKK ddPTM_KYSE-520_SHP099_60min_R1 4 NDKSEEEQSSSSVKK 15 2 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.001)S(0.004)S(0.874)S(0.12)VKK;NDKSEEEQS(0.001)S(0.111)S(0.777)S(0.111)VKK;NDKSEEEQSS(0.012)S(0.725)S(0.263)VKK;NDKSEEEQS(0.005)S(0.052)S(0.553)S(0.389)VKK 153.25 2.159e-06 7218129000.0 3192752.0 2439731.3 2246757.5 2625269.0 2725226.0 2562521.4 2758215.0 2995395.0 2973379.0 2616736.6 True False 3015643.6819666824 2322522.9462366584 2391587.0833891 2874773.776444093 2939685.7817851445 2546527.753423548 3037042.2897843057 2985004.673875447 2433488.326384911 2593554.3495142693 1.16274551274835 0.8954980822636817 0.9221272281558339 1.1084301267804515 1.1334583300078904 0.9818678964257954 1.1709962007748536 1.1509319920110754 0.9382831429156917 1.0 21.306499171897375 -5.2736904886372615 24.683409626997776 1.0787148965854376 0.9836610521368592 0.10310872862801312 0.09825365694697519 1143.8585172629237 2304630.521396374 0.027194749920371613 0.040671643877985546 5.324876153485564e-06 5.2736904886372615 -0.09505384444857845 NDKSEEEQSSS(ph)SVKKDETNVK ddPTM_KYSE-520_SHP099_60min_R1 4 NDKSEEEQSSSSVKKDETNVK 21 3 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.001)S(0.037)S(0.713)S(0.249)VKKDETNVK;NDKSEEEQSS(0.001)S(0.886)S(0.114)VKKDETNVK;NDKSEEEQSS(0.013)S(0.592)S(0.396)VKKDETNVK;NDKSEEEQS(0.102)S(0.102)S(0.423)S(0.357)VKKDET(0.016)NVK 238.69 6.0814e-24 22903270000.0 13297160.0 11392590.0 12300070.0 11515360.0 12017980.0 11138080.0 11484290.0 11460640.0 15182800.0 8452710.0 True False 12559540.027568704 10845272.875773782 13092952.193007821 12609776.352180777 12963726.653047573 11068563.11125901 12645234.109069454 11420885.71477349 12425986.247241538 8377825.565508865 1.4991407889030026 1.2945212085130164 1.5628103128466797 1.505137132968567 1.5473856016313658 1.3211737371123828 1.509369467076197 1.3632279194010397 1.4831994471690566 1.0 22.99814441552489 -11.80284886554299 0.41864353927803716 3.233298929038909e-08 1.4618381003747583 0.6982051645881147 0.08958904527512382 63.4111249673982 2.4279940983692008 56.78283168649476 0.052152521540199094 1.5745307057396525e-12 11.80284886554299 1.4618380680417689 NDKSEEEQSSSS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 8 NDKSEEEQSSSSVK 14 1 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.002)S(0.001)S(0.008)S(0.99)VK;NDKSEEEQS(0.018)S(0.018)S(0.196)S(0.768)VK;NDKSEEEQSSS(0.038)S(0.962)VK;NDKSEEEQS(0.001)S(0.17)S(0.17)S(0.659)VK;NDKSEEEQSS(0.001)S(0.019)S(0.979)VK;NDKSEEEQSS(0.002)S(0.107)S(0.892)VK;NDKSEEEQSSS(0.112)S(0.888)VK;NDKSEEEQS(0.001)S(0.001)S(0.172)S(0.826)VK 281.65 2.1248999999999997e-32 8911989000.0 11644884.0 9797680.0 8424970.0 9481676.0 10129971.0 9969776.0 10193122.0 11158264.0 11451431.0 9873174.0 True False 10998919.071019256 9326984.746182498 8968057.046628613 10382811.636270175 10927142.086049298 9907550.92988338 11223542.247044113 11119558.586542383 9372139.797483692 9785705.359573137 1.1239781565934088 0.9531233982083996 0.9164446217313669 1.0610182153208714 1.1166432755263287 1.012451383506151 1.1469323707017576 1.1363062935125434 0.9577377872219642 1.0 23.222244414257197 -5.489151947510685 23.577672346658744 1.0719802292985792 0.9926020142714539 0.11843680910272159 0.07625275505702975 538.4945865094807 376448.4572723947 0.021249151787809322 0.03148745263709523 3.242261598240318e-06 5.489151947510685 -0.07937821502712528 NDKSEEEQSSSS(ph)VKK ddPTM_KYSE-520_SHP099_60min_R1 8 NDKSEEEQSSSSVKK 15 2 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQSSS(0.004)S(0.996)VKK;NDKSEEEQSS(0.001)S(0.046)S(0.954)VKK;NDKSEEEQSSS(0.136)S(0.864)VKK;NDKSEEEQSS(0.001)S(0.042)S(0.957)VKK;NDKSEEEQSS(0.003)S(0.183)S(0.813)VKK;NDKSEEEQSSS(0.135)S(0.865)VKK;NDKSEEEQSS(0.002)S(0.137)S(0.862)VKK;NDKSEEEQS(0.041)S(0.101)S(0.056)S(0.802)VKK 171.79 1.736e-08 14179310000.0 7353100.0 5953860.0 5932790.0 6639250.0 6153890.0 6136770.0 6204050.0 6663280.0 7334320.0 6196330.0 True False 6945208.8849585485 5667827.628673939 6315227.136199622 7270242.323836693 6638166.132155563 6098468.142110754 6831215.919693096 6640166.6369012445 6002592.371161352 6141435.3368717935 1.130877149069873 0.9228832215566253 1.0282982380819712 1.1838018191265154 1.0808818733792587 0.9930037210514822 1.112315858587652 1.0812076123370022 0.9773924240678951 1.0 22.55014444175782 -9.649936158383795 12.306549204038626 0.9999999782165276 1.0568934734086861 0.0500451538006107 0.07415950804075648 0.0 0.0 0.07239914878947268 0.01755937280375323 2.239050256452921e-10 9.649936158383795 0.05689349519215847 NDKSEEEQSSSS(ph)VKKDETNVK ddPTM_KYSE-520_SHP099_60min_R1 7 NDKSEEEQSSSSVKKDETNVK 21 3 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 NDKSEEEQS(0.036)S(0.206)S(0.206)S(0.55)VKKDET(0.003)NVK;NDKSEEEQS(0.129)S(0.167)S(0.167)S(0.536)VKKDET(0.001)NVK;NDKSEEEQS(0.001)S(0.096)S(0.123)S(0.582)VKKDET(0.199)NVK;NDKSEEEQSSS(0.038)S(0.962)VKKDETNVK;NDKSEEEQSSS(0.021)S(0.979)VKKDETNVK;NDKSEEEQS(0.284)S(0.284)S(0.109)S(0.323)VKKDETNVK;NDKSEEEQSS(0.012)S(0.151)S(0.836)VKKDETNVK 272.35 1.0694e-35 42819100000.0 22804920.0 20025769.0 20866061.0 19315037.0 19324501.0 18305118.0 17583014.0 18327416.0 24289541.0 15589410.0 True False 21539885.627119027 19063700.997947916 22211120.678938005 21150732.309202358 20845229.28732983 18190868.968623243 19360476.64879983 18263842.471547056 19879172.643900316 15451299.955777451 1.3940500597857444 1.2337926939810484 1.4374920390198602 1.3688642618897455 1.3490922671225158 1.17730346447785 1.2529998578896713 1.182026271175841 1.2865695896653164 1.0 23.881224884921032 -9.838722966167426 0.16566061676405736 0.7272722451248494 1.4359989900551413 0.6734758743822874 0.07011211327399038 13.398902888421041 0.5095139073016308 2.046435551574423 0.38412230050509477 1.4496963112002292e-10 9.838722966167426 0.7087267449302919 NDKSEEEQSSSSVK ddPTM_KYSE-520_SHP099_60min_R1 8 NDKSEEEQSSSSVK 14 1 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 0 ;;;;;;; 224.86 3.8378e-14 6608250000.0 3973972.0 4542393.0 2779064.0 2935338.0 4139259.0 4210561.0 3025243.0 4102570.0 4150991.0 3472840.0 False True 3753527.851243217 4324169.622009104 2958206.912099617 3214311.6409784504 4464995.134137936 4184281.326970699 3331064.085966444 4088339.142217039 3397275.6723676426 3442073.339428634 1.0904845658710698 1.2562688808736695 0.8594258809693648 0.9338300855356002 1.2971818708775977 1.2156281735894876 0.9677493061549303 1.187754803299944 0.9869852665404196 1.0 21.71484640618596 -7.798652353391901 24.88302129201673 0.9934921886420978 1.098501858597393 0.08957677123113517 0.13695553031723073 512.7568415713989 342849.8417256371 0.13659803330508416 0.03527359187153539 1.5898188669559267e-08 7.798652353391901 0.10500966995529515 NDLAVVDVR ddPTM_KYSE-520_SHP099_60min_R1 2 NDLAVVDVR 9 0 P19338 P19338 NCL Nucleolin 0 ; 115.82 0.0063558 822240000.0 1465730.0 2226800.0 1429840.0 1039200.0 1799290.0 2067090.0 1462800.0 1779150.0 1793800.0 1908290.0 False True 1384423.0350396861 2119821.185505055 1522009.774224887 1137965.2555531256 1940883.8864403141 2054188.5245618955 1610674.0995522395 1772978.5439067336 1468091.138018143 1891384.0352271535 0.7319629484307338 1.12077777226795 0.8047068949918967 0.6016574288237857 1.0261712324367884 1.0860769078634998 0.8515849079580494 0.9373974353620895 0.7761993919134601 1.0 20.85101089372552 NDLFLSEVFHQAMVDVNEEGTEAAAGTGGVMTGR ddPTM_KYSE-520_SHP099_60min_R1 17 NDLFLSEVFHQAMVDVNEEGTEAAAGTGGVMTGR 34 0 P05120 P05120 SERPINB2 Plasminogen activator inhibitor 2 0 ;;;;;;;;;;;;;;;; 444.3 1.7378999999999997e-151 6466342000.0 2998115.4 3005514.4 1571069.7 6254685.0 2175345.9 1896869.0 2131161.5 2684319.6 2388604.2 1496875.1 False True 2831803.962167123 2861124.9768549134 1672343.3666623975 6849128.381860375 2346533.2463049334 1885029.9369631715 2346600.1025518873 2675008.3218325046 1954893.8890918246 1483613.9511652044 1.908720230045743 1.9284834674194293 1.1272092483013982 4.616516565162514 1.5816333113219967 1.2705663326249406 1.5816783744240936 1.8030352975122672 1.317656717609379 1.0 20.500684308725713 -5.968392782578749 24.999242278291707 1.4530923881565498 2.374788893505326 0.23457706401589962 0.859892560079305 322.12174258701015 254775.89947078153 0.26964893286930824 0.3057508417977527 1.0754920821331282e-06 5.968392782578749 0.921696505348776 NDNGASGQTSESIKKS(ph)EEK ddPTM_KYSE-520_SHP099_60min_R1 7 NDNGASGQTSESIKKSEEK 19 2 Q9NWH9;Q9NWH9-3 Q9NWH9 SLTM SAFB-like transcription modulator 1 NDNGASGQTSESIKKS(1)EEK;NDNGASGQT(0.001)S(0.001)ES(0.009)IKKS(0.989)EEK;NDNGASGQTSES(0.001)IKKS(0.999)EEK;NDNGAS(0.001)GQT(0.005)S(0.004)ES(0.063)IKKS(0.927)EEK;NDNGASGQTSES(0.003)IKKS(0.997)EEK;NDNGASGQTSESIKKS(1)EEK;NDNGASGQTSESIKKS(1)EEK 276.23 7.032999999999999e-36 7559240000.0 5367930.0 4748880.0 4843310.0 4587490.0 4536880.0 4172830.0 4428000.0 4695190.0 5683960.0 4809790.0 True False 5070160.222196838 4520736.676585798 5155517.512169991 5023483.670320841 4893906.644683919 4146785.8201373075 4875625.453115476 4678903.481755583 4651896.144971353 4767179.002559992 1.0635556624733715 0.9483043691369984 1.0814608617384538 1.0537644312544614 1.0265833613665176 0.8698615717829075 1.0227485585284817 0.9814826502724138 0.9758173843426623 1.0 22.184704367430967 -6.034416381092573 24.99853572192805 0.969467030904233 1.0344606037735269 0.2988985866257622 0.049727471465990464 804.7107547249835 584504.2299199767 0.01614188080790943 0.01614979890129513 9.238120417441103e-07 6.034416381092573 0.06499357286929386 NDQDTWDYTNPNLSGQGDPGS(ph)NPNKR ddPTM_KYSE-520_SHP099_60min_R1 1 NDQDTWDYTNPNLSGQGDPGSNPNKR 26 1 P14866;M0QXS5;P14866-2;A0A3B3ITJ4 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 1 NDQDTWDYTNPNLS(0.016)GQGDPGS(0.984)NPNKR 90.03 0.0035713 351900000.0 96047.0 89537.0 89648.0 82127.0 84789.0 61021.0 79934.0 81357.0 90973.0 83107.0 True False 90719.0814450524 85235.50812222298 95426.85352187151 89932.32538761703 91461.41191658238 60640.145304409314 88014.5088006622 81074.79155586663 74454.59644270528 82370.73663626767 1.1013508577160032 1.0347789955868132 1.1585043113461153 1.0917994552451291 1.110362923187846 0.7361855408940168 1.0685167135182518 0.9842669237483735 0.903896207356765 1.0 16.329844270257247 NDQDTWDYTNPNLSGQGDPGSNPNKR ddPTM_KYSE-520_SHP099_60min_R1 2 NDQDTWDYTNPNLSGQGDPGSNPNKR 26 1 P14866;M0QXS5;P14866-2;A0A3B3ITJ4 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 ; 103.63 0.0048481 1148030000.0 256790.0 257860.0 219067.0 188256.0 253870.0 271950.0 232720.0 257860.0 272200.0 244000.0 False True 242545.3468018264 245472.0185442492 233188.4093395931 206147.79363876957 273848.1246772906 270252.65917526936 256245.6087283268 256965.54384497658 222775.3416036008 241838.34982912755 1.0029234278731987 1.0150251964491532 0.96423255246471 0.8524197828194934 1.1323602103255326 1.117492983913503 1.0595739216273135 1.0625508486414055 0.9211745852591376 1.0 17.883683514397237 -5.774884169104343 24.99985616183824 1.055953750261335 0.9630757295581825 0.28727363627862335 0.06892793624292128 310.82033945652483 577951.5856968215 0.022362100023726194 0.02549767918551041 1.679251832486712e-06 5.774884169104343 -0.09287802070315243 NDQWHWDNIR ddPTM_KYSE-520_SHP099_60min_R1 1 NDQWHWDNIR 10 0 E9PF63;O75116;C9JFJ0;D6REE7 E9PF63 ROCK2 Rho-associated protein kinase 2 0 119.74 0.00089456 585460000.0 545490.0 610960.0 413490.0 417980.0 681530.0 624840.0 449510.0 536460.0 692980.0 536530.0 False True 515230.58229264384 581608.5645303437 440144.2270073918 457704.6935297306 735162.5336247439 620940.1417873708 494950.85759483645 534599.1454707053 567152.3006042 531776.7616140242 0.9688851027052026 1.0937081243736044 0.8276860870555653 0.8607083396057521 1.3824645729035105 1.16767069682158 0.9307493168610538 1.0053074599350953 1.0665232886123222 1.0 19.020461207937906 -4.20839420175248 19.79478072981767 1.0368449639773913 0.9688804995803327 0.018002624537458933 0.15134811235146975 17693.383574661602 6599982.754457309 0.04028439387372007 20.245269453522642 6.188790739925862e-05 4.20839420175248 -0.06796446439705861 NDREYDS(ph)GDT(ph)DEIIAMKK ddPTM_KYSE-520_SHP099_60min_R1 2 NDREYDSGDTDEIIAMKK 18 2 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 2 NDREYDS(1)GDT(1)DEIIAMKK;NDREYDS(1)GDT(1)DEIIAMKK 155.87 3.0608e-06 733050000.0 1783820.0 2038790.0 1728370.0 1480960.0 1672430.0 1517650.0 1165290.0 1241360.0 2349300.0 1471370.0 True False 1684867.948642989 1940843.468113818 1839783.4956897777 1621709.9931331407 1804040.7261749753 1508177.783406316 1283088.885334445 1237054.0118956023 1922726.3410335733 1458334.8065085371 1.1553368548315766 1.3308627480135895 1.2615645512119973 1.1120285862309953 1.2370552483034454 1.0341780067754882 0.8798314897292645 0.8482647512592031 1.3184395877081587 1.0 20.475890542925004 -6.3203884524987055 4.521854559988924 0.9943781696920774 1.2224694449485751 0.3743415676522628 0.13048437968311533 0.22585377144210766 9.603259584802649 0.04694860838545542 0.04174961627546488 4.782021754644098e-07 6.3203884524987055 0.22809127525649775 NDREYDS(ph)GDTDEIIAMK ddPTM_KYSE-520_SHP099_60min_R1 2 NDREYDSGDTDEIIAMK 17 1 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 NDREYDS(0.999)GDT(0.001)DEIIAMK;NDREYDS(0.981)GDT(0.019)DEIIAMK 174.01 1.262e-08 627770000.0 963990.0 979520.0 781360.0 788550.0 962990.0 937870.0 896950.0 796300.0 1229800.0 840580.0 True False 910515.5530335786 932462.3889105063 831727.7158202024 863493.5549137967 1038771.8343364084 932016.4054447878 987622.4593884193 793537.8211578169 1006499.3207351493 833133.1151613451 1.092881241261485 1.119223773418159 0.9983131154967108 1.036441283151459 1.246825765814433 1.1186884646450441 1.1854317652433677 0.9524742285680721 1.2080894426339421 1.0 19.668187497326805 -3.849649661574711 15.253216219414655 1.0984335938761471 0.0023947524546968336 0.0 0.09344318088985426 23496551.707123403 11915292.91211857 0.022737516996726024 895420734.5583352 0.00014136774758299867 3.849649661574711 -1.0960388414214504 NDS(ph)GEENVPLDLTR ddPTM_KYSE-520_SHP099_60min_R1 2 NDSGEENVPLDLTR 14 0 Q6R327-3;Q6R327;Q6R327-4 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 NDS(1)GEENVPLDLTR;NDS(1)GEENVPLDLTR 92.211 0.0045281 315210000.0 1451560.0 1589130.0 1386510.0 1426500.0 1364070.0 1422140.0 1261310.0 1429480.0 1811970.0 1436020.0 True False 1371039.0731868783 1512785.8094672388 1475886.6530944388 1562074.131107138 1471414.5485033735 1413263.8967439504 1388815.523999341 1424521.4675231408 1482961.9240465672 1423297.9800066527 0.96328322842169 1.0628735730097558 1.036948463235745 1.0975032305602208 1.0338063913338063 0.9929501176818537 0.9757728483482072 1.000859614454369 1.0419195030682442 1.0 20.44080630376317 -6.161459498472358 5.231190611899133 1.0008332902892143 1.0441053659027082 0.21134423302496674 0.034929907274970355 0.33143731561891215 13.865635042351851 0.011786808304172182 0.011790847096019758 6.895098926336279e-07 6.161459498472358 0.04327207561349389 NDS(ph)LPVLR ddPTM_KYSE-520_SHP099_60min_R1 4 NDSLPVLR 8 0 Q9GZY8-5 Q9GZY8-5 MFF Mitochondrial fission factor 1 NDS(1)LPVLR;NDS(1)LPVLR;NDS(1)LPVLR;NDS(1)LPVLR 120.77 0.00094074 1479710000.0 1753970.0 1659740.0 1437520.0 1669800.0 1785440.0 1730840.0 1718410.0 1733590.0 2178480.0 1539970.0 True False 1656673.78764749 1580003.5990794695 1530184.8393133213 1828497.289956326 1925943.9702360313 1720037.1855375017 1892123.652865437 1727576.5809129463 1782922.947011801 1526327.06387853 1.0853989468271221 1.0351671253633823 1.0025274893737313 1.197972134039185 1.2618160391797286 1.1269125905208923 1.2396580638866392 1.131852157900564 1.168113302322792 1.0 20.541632707694017 -5.264718855854223 24.974031794263535 1.1724671571238081 1.0404447786955189 0.3684202791073078 0.07079793365941879 256.2915532180311 1951728.947385406 0.018762974396467583 0.0291775788962391 5.436021229691344e-06 5.264718855854223 -0.13202237842828923 NDS(ph)WGSFDLR ddPTM_KYSE-520_SHP099_60min_R1 12 NDSWGSFDLR 10 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 NDS(1)WGSFDLR;NDS(0.998)WGS(0.002)FDLR;NDS(0.943)WGS(0.057)FDLR;NDS(1)WGSFDLR;NDS(0.998)WGS(0.002)FDLR;NDS(0.998)WGS(0.002)FDLR;NDS(1)WGSFDLR;NDS(1)WGSFDLR;NDS(1)WGSFDLR;NDS(0.981)WGS(0.019)FDLR;NDS(0.998)WGS(0.002)FDLR;NDS(0.993)WGS(0.007)FDLR 203.76 7.4003e-07 14803370000.0 13474170.0 11902670.0 11092150.0 10789570.0 11892440.0 11352110.0 10886380.0 11032050.0 13865140.0 12345030.0 True False 12726730.93000804 11330847.866928095 11807167.737067498 11815007.488797478 12828307.369272461 11281257.270638604 11986881.531230174 10993782.39344984 11347580.087736012 12235662.638488011 1.0401341803896542 0.9260510200147423 0.9649798368849549 0.9656205665259733 1.0484358508643619 0.9219980645063498 0.9796675411370626 0.8985032293116874 0.9274185161040251 1.0 23.54458889880201 -7.22380399074844 24.536497456565453 0.9347206293350123 0.9756825662962674 0.10972377207829331 0.04544277469512195 829.7340709829759 540948.3528477193 0.02065428016851231 0.011924173523989166 5.973048061304374e-08 7.22380399074844 0.04096193696125505 NDSDLFGLGLEEAGPKES(ph)S(ph)EEGKEGK ddPTM_KYSE-520_SHP099_60min_R1 4 NDSDLFGLGLEEAGPKESSEEGKEGK 26 2 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 2 NDSDLFGLGLEEAGPKES(1)S(1)EEGKEGK;NDSDLFGLGLEEAGPKES(1)S(1)EEGKEGK;NDSDLFGLGLEEAGPKES(1)S(1)EEGKEGK;NDSDLFGLGLEEAGPKES(1)S(1)EEGKEGK 129.25 5.504e-05 737225000.0 405502.0 396480.0 353863.0 343257.0 372614.0 365600.0 337573.0 427929.0 428649.0 394278.0 True False 383007.99571180367 377432.50567138713 376673.5751808182 375880.0420760195 401936.60191635095 363318.1547875657 371698.17323499295 426444.614178379 350817.1469619467 390785.0036636422 0.9800990112749249 0.9658316008365871 0.9638895342694112 0.9618589212792522 1.0285364027487278 0.9297136568226199 0.9511577203584871 1.0912512255598985 0.8977241799787773 1.0 18.57601557952404 NDSYTLHK ddPTM_KYSE-520_SHP099_60min_R1 1 NDSYTLHK 8 0 J3QSA9;J3QQM1;P62195-2;P62195;J3QRW1;J3QSE0;J3QLH6;J3KRP2 J3QSA9 PSMC5 26S protease regulatory subunit 8 0 111.46 0.0018170000000000003 330280000.0 219490.0 267270.0 176780.0 274690.0 242550.0 239700.0 179370.0 194800.0 212430.0 196610.0 False True 207314.4521575328 254429.94801955114 188175.5216580007 300796.45501144003 261637.30507928014 238203.94338779937 197502.47008250278 194124.28426666156 173858.06692451442 194868.1883602655 1.0638701673269373 1.3056515286587975 0.9656554168303159 1.543589323339621 1.3426373349126344 1.2223849638680697 1.0135182748113156 0.9961825267640471 0.8921829077770851 1.0 17.57213906867165 -6.791205854997229 3.4207291231470496 0.9654780574417257 1.2523936310077977 0.43562223463265126 0.14869547593022944 0.23272811778966457 5.651802082896018 0.06658817049624956 0.045203126392042804 1.617313251635089e-07 6.791205854997229 0.286915573566072 NDVDDEEVHGS(ph)SDDSK ddPTM_KYSE-520_SHP099_60min_R1 2 NDVDDEEVHGSSDDSK 16 0 Q03188;H0Y8J2 Q03188 CENPC Centromere protein C 1 NDVDDEEVHGS(0.961)S(0.039)DDSK;NDVDDEEVHGS(0.87)S(0.13)DDSK 154.65 2.4306e-06 102350000.0 243570.0 224156.0 231460.0 225200.0 225020.0 211524.0 214570.0 221090.0 277190.0 220690.0 True False 230058.6865552429 213387.20929498438 246380.2819490941 246602.9402911512 242727.79381133642 210203.80025515595 236260.8296013973 220323.09039279408 226859.28339126383 218734.85829422166 1.0517696555058886 0.9755519122971972 1.126387828032816 1.1274057652001859 1.109689583563502 0.9609981778597423 1.080124272115793 1.0072609921937365 1.0371428000109335 1.0 17.738823625690742 -6.241939449016275 24.993860734579567 1.0214977414375221 1.0778755394849606 0.26966748402485985 0.049977332455471396 1345.686474532343 1724822.033432777 0.017534148507230993 0.01750791702715795 5.72875897948341e-07 6.241939449016275 0.05637779804743848 NEDEDS(ph)PNKLYTLVTYVPVTTFK ddPTM_KYSE-520_SHP099_60min_R1 2 NEDEDSPNKLYTLVTYVPVTTFK 23 1 H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899;P62899-2 H7C2W9 RPL31 60S ribosomal protein L31 1 NEDEDS(0.998)PNKLY(0.002)TLVTYVPVTTFK;NEDEDS(1)PNKLYTLVTYVPVTTFK 266.67 1.145e-37 1288493000.0 1060090.0 1104730.0 941140.0 964790.0 947950.0 1033280.0 933000.0 1058620.0 1281690.0 889140.0 True False 1001284.6944629779 1051657.112566463 1001807.3902772424 1056483.351525308 1022548.271902302 1026830.9162442456 1027316.7452025138 1054947.8943037665 1048967.4047756018 881262.9113404535 1.1361929358174896 1.1933522891220165 1.1367860571295727 1.1988287921005705 1.1603214645070505 1.1651811315676208 1.165732418762414 1.1970864548232578 1.1903001831542641 1.0 19.749212963845977 -9.985461804739233 4.613575097134523 0.9999967576803361 1.1720186408603899 0.844261377595904 0.022100739811383455 2461178.2266189586 5329123.02806369 49.13915262796067 0.005065192442255566 1.0340420387452002e-10 9.985461804739233 0.17202188318005374 NEDEDSPNKLY(ph)TLVTYVPVTTFK ddPTM_KYSE-520_SHP099_60min_R1 1 NEDEDSPNKLYTLVTYVPVTTFK 23 1 H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899;P62899-2 H7C2W9 RPL31 60S ribosomal protein L31 1 NEDEDS(0.299)PNKLY(0.596)T(0.104)LVT(0.001)Y(0.001)VPVTTFK 73.98100000000001 0.0056671000000000004 26318000.0 154760.0 156110.0 140670.0 139640.0 137850.0 160600.0 141690.0 164760.0 186980.0 136170.0 True False 146175.1542935885 148610.24127411284 149737.81327995795 152911.343615703 148698.01074079052 159597.6358284548 156013.4079611409 164188.48601527314 153029.14538222356 134963.63973865705 1.0830706298128991 1.101113170642708 1.109467806069172 1.1329817713259644 1.101763489994258 1.1825232050461807 1.1559662162582791 1.2165386642891889 1.133854612090697 1.0 17.042211260718677 -5.382247345748664 1.0705722082861966 1.1488965669594375 1.0900956107470874 0.04628327043625258 0.05473842951342834 1.150746409980216 2.5831523798870903 0.020450780035745575 0.04957714202117476 4.1471777922217776e-06 5.382247345748664 -0.05880095621235015 NEDEEEEEEEKDEAEDLLGR ddPTM_KYSE-520_SHP099_60min_R1 1 NEDEEEEEEEKDEAEDLLGR 20 1 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 0 191.65 5.9194e-13 316930000.0 225240.0 230990.0 239780.0 137650.0 239250.0 254400.0 195360.0 194830.0 248740.0 224060.0 False True 212745.48819519172 219892.89367694152 255236.602461565 150732.2146140186 258077.61385371155 252812.19523511117 215108.8953298641 194154.18020366403 203575.086225127 222075.002716042 0.9579893531160751 0.9901739997189568 1.1493261255879632 0.6787446257819191 1.1621191520763126 1.138409060646828 0.96863173567047 0.8742730060974977 0.9166951873706827 1.0 17.760687483318016 -7.000927286419851 24.993896017726378 0.921580916738532 1.0132371462190637 0.07027135693540254 0.13425163131716014 89.81021262052029 2420760.4729335587 0.057229721388122955 0.03804522101726234 9.97867121936588e-08 7.000927286419851 0.09165622948053165 NEEDEGHS(ph)NS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 NEEDEGHSNSSPR 13 0 Q14103-3;Q14103;D6RAF8;D6RD83 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 2 NEEDEGHS(0.725)NS(0.725)S(0.55)PR 58.04 0.037991000000000004 652620000.0 771670.0 738510.0 668300.0 806830.0 719140.0 712650.0 662600.0 762690.0 842320.0 741160.0 True False 728863.9268139928 703030.8710738898 711379.6873178062 883510.8806177154 775732.2266531169 708202.0870059053 729582.0743528248 760044.406403185 689375.9211592391 734593.8990137554 0.992199809707846 0.957033364989498 0.9683985781434941 1.2027201448363398 1.0560014556268336 0.9640729224088534 0.9931774213376136 1.0346456830414719 0.9384449313896772 1.0 19.48658738861263 -9.315488046309135 12.40015763536231 0.9999999999600939 1.0145921324949703 0.0011285976987124302 0.0722955565282524 0.0 0.0 0.07409709232256766 0.017971184599828823 4.836285757005715e-10 9.315488046309135 0.014592132534876345 NEEDEGHS(ph)NSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 NEEDEGHSNSSPR 13 0 Q14103-3;Q14103;D6RAF8;D6RD83 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 2 NEEDEGHS(1)NS(0.127)S(0.873)PR;NEEDEGHS(1)NS(0.017)S(0.983)PR 241.11 1.8019999999999997e-18 514370000.0 775390.0 722980.0 648690.0 854130.0 716170.0 706040.0 720720.0 737620.0 861970.0 701670.0 True False 732377.570998357 688246.9555848965 690505.5953406974 935306.2583964525 772528.5045501051 701633.3424677596 793577.4111493628 735061.3683818032 705457.9764954278 695453.7496909992 1.0530931371406995 0.9896372776632454 0.9928849986753249 1.3448863548611587 1.1108265717071069 1.0088856991273771 1.1410930079850192 1.0569521966175353 1.01438517918535 1.0 19.407595047708824 -9.648155136509374 12.140776054595513 0.9999999991398689 1.0818558639860358 0.05220647250770516 0.10063691577820161 0.0 0.0 0.10176789576679515 0.02468234020843205 2.2482513532390643e-10 9.648155136509374 0.08185586484616691 NEEDEGHSNS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 3 NEEDEGHSNSSPR 13 0 Q14103-3;Q14103;D6RAF8;D6RD83 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHS(0.005)NS(0.498)S(0.498)PR;NEEDEGHS(0.064)NS(0.468)S(0.468)PR;NEEDEGHSNS(0.896)S(0.103)PR 152.32 3.2715e-06 88447700000.0 1353170.0 1346990.0 1263930.0 1680410.0 1363550.0 1288700.0 1342100.0 1266390.0 1520800.0 1307600.0 True False 1278106.962622483 1282278.5785267905 1345404.9501595018 1840115.6611663122 1470853.6274617708 1280656.745281008 1477772.5656337568 1261997.1886676487 1244661.0562481845 1296015.6812974056 0.9861817114303781 0.9894005119159798 1.038108542647149 1.419825151594017 1.1349041903484838 0.9881491125161216 1.1402428126135011 0.9737514806952784 0.9603749971622169 1.0 20.305651743714254 -7.272352737651006 23.42494630649893 0.9752973865891743 1.1023393679774083 0.1732793965893461 0.12146705417775741 614.2407086006724 1318418.9445146872 0.07116506077725868 0.03478778923316343 5.3413035797715914e-08 7.272352737651006 0.12704198138823397 NEEDEGHSNSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 NEEDEGHSNSSPR 13 0 Q14103-3;Q14103;D6RAF8;D6RD83 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 1 NEEDEGHSNS(0.112)S(0.888)PR;NEEDEGHSNS(0.078)S(0.922)PR;NEEDEGHSNS(0.04)S(0.96)PR 266.44 4.8469e-26 22139700000.0 4054300.0 4049900.0 3636590.0 4941300.0 3980200.0 4035800.0 4163600.0 4070500.0 4755400.0 3894700.0 True False 3829399.896953323 3855336.724976171 3871010.410149724 5410919.66634398 4293419.095759844 4010611.0751960054 4584497.320820135 4056380.3855618453 3891939.2338786265 3860195.98803075 0.9920221431313551 0.9987411874760644 1.0028015215166552 1.4017214885258507 1.112228267443514 1.0389656607155817 1.1876333054164128 1.050822392992325 1.008223221294023 1.0 21.880242666502003 -10.021153170407292 13.570914010120726 1.0000000490660865 1.093305629106522 0.044838673277935004 0.11990186169466145 0.0 0.0 0.12131094222617342 0.029422225196571457 9.524601836003491e-11 10.021153170407292 0.09330558004043543 NEEPS(ph)EEEIDAPKPK ddPTM_KYSE-520_SHP099_60min_R1 15 NEEPSEEEIDAPKPK 15 1 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK;NEEPS(1)EEEIDAPKPK 272.4 3.8884999999999996e-25 105517590000.0 44395380.0 40813040.0 39145150.0 36193160.0 37226150.0 36956630.0 39007560.0 41961200.0 43978080.0 40514930.0 True False 41932679.77140406 38852320.296778 41668509.00345451 39632947.04452966 40155636.21718013 36725969.96380414 42950824.84189901 41815646.39101767 35992769.269178845 40155999.24033854 1.0442444607200998 0.9675346406957062 1.0376658479860856 0.9869744943295186 0.9999909596781235 0.914582395123447 1.0695992044634002 1.041329992580833 0.896323586763655 1.0 25.25911220432589 -5.3773262920940255 16.813994176674566 0.9896577218083773 1.0117469414895632 0.0589395337953853 0.05226107757514439 8.086405880344175 1139.012512623608 0.01469714168151858 0.02179933470586603 4.194437310811247e-06 5.3773262920940255 0.022089219681185934 NEEPVRS(ph)PERR ddPTM_KYSE-520_SHP099_60min_R1 10 NEEPVRSPERR 11 2 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR;NEEPVRS(1)PERR 117.93 0.00083094 15589995000.0 2601199.0 2399530.0 2374732.0 2347637.0 2388078.0 2313465.0 2234789.0 2239343.0 2894886.0 2224994.0 True False 2456905.306108351 2284252.977032039 2527811.0244255443 2570755.714637201 2576006.1522948546 2299025.8067987333 2460703.2815588256 2231575.2417995837 2369247.676537401 2205282.2841791376 1.1141001420699634 1.035809788805471 1.1462528142361876 1.165726371213335 1.168107217282485 1.0425086272592488 1.1158223594376546 1.0119227174720777 1.0743512037141747 1.0 21.072531907156634 -7.253685615793976 24.21312804693551 1.032352719141563 1.1124379573002456 0.41125391696019864 0.045919851971100156 406.31595762276675 1268832.7904778558 0.023279419610519134 0.013092557344506931 5.5758923970719665e-08 7.253685615793976 0.08008523815868274 NEES(ph)EKEDA ddPTM_KYSE-520_SHP099_60min_R1 1 NEESEKEDA 9 1 Q9BYD6 Q9BYD6 MRPL1 39S ribosomal protein L1, mitochondrial 1 NEES(1)EKEDA 76.92699999999999 0.030325 431010000.0 1874800.0 1718400.0 1519400.0 1831300.0 1868600.0 1890000.0 2046200.0 1735400.0 2173800.0 1794300.0 True False 1770801.1066788558 1635845.4846290129 1617342.9551259563 2005346.201399578 2015648.1891203597 1878203.8089400977 2253049.8649875536 1729380.3024454045 1779092.7170386012 1778403.8979442767 0.9957249355592342 0.9198391245767891 0.9094351159461038 1.12761010236068 1.1334029302625364 1.056117685701872 1.2668943582455807 0.9724339360954278 1.0003873243277979 1.0 20.762151584935495 -5.259067326125113 24.997261393318468 1.0874744980340543 0.9394836594226682 0.3611626277494854 0.08355670404644741 221.5793371491031 2335045.4774912777 0.02347872258063453 0.03834846302052456 5.507223145386357e-06 5.259067326125113 -0.14799083861138607 NEGNLENEGKPEDEVEPDDEGKS(ph)DEEEKPDVEGK ddPTM_KYSE-520_SHP099_60min_R1 3 NEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGK 34 3 Q969E4 Q969E4 TCEAL3 Transcription elongation factor A protein-like 3 1 NEGNLENEGKPEDEVEPDDEGKS(1)DEEEKPDVEGK;NEGNLENEGKPEDEVEPDDEGKS(1)DEEEKPDVEGK;NEGNLENEGKPEDEVEPDDEGKS(1)DEEEKPDVEGK 170.49 1.8722e-10 6921200000.0 3337000.0 2854190.0 2583090.0 2645620.0 2794570.0 2910320.0 3008570.0 2876610.0 3320570.0 2775700.0 True False 3151889.9578554207 2717070.42817347 2749600.114490129 2897058.929365341 3014486.7600717563 2892155.6133516124 3312705.616413646 2866631.7113158214 2717638.192757784 2751109.45746192 1.1456795909397393 0.9876271628538351 0.9994513693493011 1.0530511323377403 1.0957349413690065 1.0512688273842135 1.2041344292676146 1.0419911514391282 0.9878335394422962 1.0 21.391582110140067 -4.226963499362145 22.493738628063337 1.0534034293206727 1.1456803105852802 0.17721670598406347 0.06247831094752253 8146.560348800115 5314854.033102888 0.016337959798882768 2.3203857440613245 5.929751595720183e-05 4.226963499362145 0.09227688126460754 NEGRPET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 NEGRPETPK 9 1 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 NEGRPET(1)PK;NEGRPET(1)PK 76.52199999999999 0.041911000000000004 1043080000.0 349490.0 317580.0 279310.0 250920.0 270280.0 294840.0 264580.0 263280.0 355400.0 284330.0 True False 330103.0930089575 302322.9801027016 297314.7695118007 274767.36135815125 291549.4983171626 292999.79419465497 291326.328451963 262366.74313001387 290868.3189049216 281811.0574053926 1.1713631681034276 1.0727860818740056 1.0550145627682226 0.9750056079697795 1.0345566316716985 1.0397029729503022 1.0337647185819343 0.9310023018457805 1.0321394823287573 1.0 18.10436869414312 -1.000002198899871 0.6628712083434338 1.0034088513536645 17.653927884491956 0.6982683995363266 0.03300059472310257 131.5710315201158 0.8078442784942619 0.013796012708892979 3223.7009423133904 0.09999949368587537 1.000002198899871 16.65051903313829 NEGS(ph)ES(ph)APEGQAQQR ddPTM_KYSE-520_SHP099_60min_R1 3 NEGSESAPEGQAQQR 15 0 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 2 NEGS(1)ES(1)APEGQAQQR;NEGS(1)ES(1)APEGQAQQR;NEGS(1)ES(1)APEGQAQQR 259.56 4.6805e-27 480160000.0 694570.0 613620.0 543160.0 598840.0 631760.0 632100.0 682460.0 702170.0 667800.0 616020.0 True False 656040.8175090327 584140.7741376023 578172.9626867272 655753.5735521895 681475.9177773081 628154.8294344109 751449.716967748 699734.3361577105 546544.353868055 610562.5420563077 1.0744858590564026 0.9567255340792448 0.9469512504640459 1.0740154011801697 1.1161443272988416 1.0288132437978497 1.2307497843496062 1.1460485830019673 0.8951488442565665 1.0 19.219779557516947 -5.350440706158001 6.809034693822163 1.0836524589585848 0.9894134629389038 0.1209138607238347 0.09070896712049224 0.43504446515344314 28.259020940830712 0.025814535789566505 0.038469542021871056 4.462305438842382e-06 5.350440706158001 -0.094238996019681 NEGS(ph)PS(ph)PRQS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 1 NEGSPSPRQSPKR 13 2 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 3 NEGS(1)PS(1)PRQS(1)PKR 47.047 0.058601 61465000.0 100120.0 115600.0 112760.0 82588.0 88740.0 82493.0 69602.0 79464.0 156780.0 84010.0 True False 94566.14401572822 110046.4024808626 120028.69002237907 90437.13868901241 95723.33313846754 81978.13058777529 76638.04941005948 79188.35793103706 128312.70410217662 83265.73675879088 1.1357149734911134 1.3216288807922463 1.441513576827949 1.0861266855897291 1.1496125160792676 0.9845361823345705 0.9204031861516956 0.9510317330216459 1.541002447067519 1.0 16.34543533880037 -5.323378956844122 11.203661539845548 1.0792075035201203 1.3017505587856222 0.22008588046559974 0.17962153531741817 1.2791150880890865 229.15487582953952 0.05101055589388276 0.07569443530389498 4.74920638657318e-06 5.323378956844122 0.2225430552655019 NEGSES(ph)APEGQAQQR ddPTM_KYSE-520_SHP099_60min_R1 12 NEGSESAPEGQAQQR 15 0 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NEGS(0.003)ES(0.997)APEGQAQQR;NEGS(0.002)ES(0.998)APEGQAQQR;NEGSES(1)APEGQAQQR;NEGS(0.002)ES(0.998)APEGQAQQR;NEGSES(1)APEGQAQQR;NEGSES(1)APEGQAQQR;NEGSES(1)APEGQAQQR;NEGSES(1)APEGQAQQR;NEGSES(1)APEGQAQQR;NEGSES(1)APEGQAQQR;NEGSES(1)APEGQAQQR;NEGSES(1)APEGQAQQR 402.5 1.2343999999999998e-87 8661355000.0 4168298.0 3518898.0 3230395.0 3586402.0 3545412.0 3885349.0 4032860.0 4412365.0 3967547.0 3831608.0 True False 3937074.20064394 3349844.8581064194 3438631.430514751 3927252.567788918 3824415.7537651625 3861099.095693966 4440540.845720698 4397059.535668738 3247140.4785207217 3797662.9340659124 1.0367097525500424 0.8820806154378628 0.9054598815680649 1.0341235217482196 1.0070445482297208 1.0167039999940533 1.1692825094844577 1.1578330178347582 0.8550365145345372 1.0 21.856680432438957 -5.3310697471097015 5.8894341118247295 1.0453562478765517 0.9357225735228403 0.17222243557666084 0.090915206767504 0.3386517017789413 21.88864700412329 0.026226240597058244 0.039423801167724745 4.6658444146313104e-06 5.3310697471097015 -0.10963367435371141 NEIIQS(ph)PISQVPSVEK ddPTM_KYSE-520_SHP099_60min_R1 3 NEIIQSPISQVPSVEK 16 0 Q7Z3T8 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 1 NEIIQS(0.973)PIS(0.027)QVPSVEK;NEIIQS(1)PISQVPSVEK;NEIIQS(0.998)PIS(0.002)QVPSVEK 186.56 4.5111e-12 2247170000.0 1813580.0 2196530.0 1522620.0 1360670.0 1676850.0 2684980.0 2018240.0 3124620.0 3250460.0 3179670.0 True False 1712977.1021179003 2091005.4017412518 1620770.5214781377 1489987.667699646 1808808.555028616 2668222.0438772407 2222263.395324245 3113781.422511791 2660258.4014285076 3151500.597545829 0.5435433213789801 0.663495162707436 0.5142853289446563 0.4727867317746807 0.5739515189802569 0.8466512892160223 0.7051445260885529 0.9880313603419871 0.8441243525386393 1.0 21.587607505601053 -6.608960972644049 1.1239009086358107 0.9348485049867808 0.5466209763042538 0.777491593660849 0.08707727414580181 0.2337871463875018 0.6009236637402194 0.05549145202200727 0.03626433257496878 2.460588712084348e-07 6.608960972644049 -0.3882275286825271 NEIIQSPISQVPS(ph)VEK ddPTM_KYSE-520_SHP099_60min_R1 3 NEIIQSPISQVPSVEK 16 0 Q7Z3T8 Q7Z3T8 ZFYVE16 Zinc finger FYVE domain-containing protein 16 1 NEIIQSPISQVPS(1)VEK;NEIIQSPISQVPS(1)VEK;NEIIQSPISQVPS(1)VEK 240.68 4.236199999999999e-23 896530000.0 1716640.0 1301630.0 806660.0 803290.0 863070.0 1497150.0 1045840.0 1524570.0 1852530.0 1748520.0 True False 1621414.557163001 1239097.7410135388 858658.5943016337 879634.4400820541 930988.69880344 1487805.7315104052 1151563.7136147895 1519281.622507312 1516157.250480963 1733029.4731279775 0.9355954888848367 0.7149894218342796 0.4954668155480499 0.5075703868407878 0.5372030385167547 0.8584999589332065 0.6644801669392908 0.8766623107483176 0.8748594723807104 1.0 20.724864759525662 -7.398616763555799 0.9588308210583653 0.9835316973629352 0.6428006333285232 0.41301860218556186 0.1365402532944203 0.5683637412750272 0.9492718169102834 0.1335791381242265 0.051883768390530514 3.993771711159226e-08 7.398616763555799 -0.340731064034412 NEKQT(ph)PSLPEPK ddPTM_KYSE-520_SHP099_60min_R1 3 NEKQTPSLPEPK 12 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 NEKQT(0.999)PS(0.001)LPEPK;NEKQT(1)PSLPEPK;NEKQT(0.98)PS(0.02)LPEPK 109.35 0.00057037 1171010000.0 1379500.0 1289780.0 997710.0 948640.0 929750.0 1326030.0 1084290.0 1270280.0 1364920.0 1353680.0 True False 1302976.3850349267 1227817.032800752 1062023.9829924416 1038798.4603809844 1002916.0354461377 1317753.7549041463 1193900.6148506277 1265873.69516558 1117084.9348331622 1341687.4483471035 0.9711474804658364 0.9151289551924819 0.7915584097479675 0.774247729350629 0.7475034790566786 0.9821614985871393 0.889850029022376 0.9434937300226497 0.832596992846105 1.0 20.35561719821172 -6.27490870012032 24.993109314623464 0.9236031527122874 0.8377607317360958 0.2583078791314133 0.07561441039830671 1292.5016914279565 2398305.222560032 0.02829495411993803 0.025096617878081862 5.309960615391678e-07 6.27490870012032 -0.08584242097619166 NELDS(ph)PHEEK ddPTM_KYSE-520_SHP099_60min_R1 1 NELDSPHEEK 10 0 Q8TBZ6 Q8TBZ6 TRMT10A tRNA methyltransferase 10 homolog A 1 NELDS(1)PHEEK 135.58 0.0025271 0.0 954010.0 852320.0 768050.0 832950.0 879200.0 806110.0 778530.0 900820.0 905950.0 816750.0 True False 901089.1635282144 811373.2678415972 817559.731923449 912113.3175644518 948388.0380362944 801078.7684786784 857231.410120594 897695.2656729682 741452.317141007 809514.2304218856 1.113123314779289 1.0022964851633833 1.009938678282864 1.126741548556961 1.1715520276178881 0.9895796001772433 1.0589454488945056 1.1089308031127831 0.9159225239988585 1.0 19.626696916272415 -7.760451446946929 24.999744266179 0.9579612473679594 1.0700792527391747 0.37341191103452065 0.05934614786180433 28.39569338867983 718716.2965897808 0.047272253098080745 0.015511068419828043 1.7359953320240323e-08 7.760451446946929 0.1121180053712153 NELESYAYSLK ddPTM_KYSE-520_SHP099_60min_R1 2 NELESYAYSLK 11 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 199.43 2.9266e-06 499990000.0 822040.0 1077670.0 701450.0 554930.0 844570.0 952540.0 753390.0 890390.0 883930.0 864570.0 False True 776439.8025038869 1025897.1155843507 746666.589359683 607670.3803542115 911032.8540540409 946594.8445332274 829550.0135778377 887301.4449085873 723430.5940619796 856910.5824252818 0.9060919755552074 1.197204395213317 0.8713471448169313 0.7091409451781363 1.0631597657197545 1.104660000643376 0.9680706839096251 1.0354656169577126 0.8442311355456495 1.0 19.708785143159655 NELLS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 1 NELLSPLK 8 0 H7C4C2;P51826;P51826-2 H7C4C2 AFF3 AF4/FMR2 family member 3 1 NELLS(1)PLK 64.439 0.056662 0.0 137490.0 687570.0 356450.0 209840.0 463010.0 261040.0 410440.0 407290.0 754380.0 205520.0 True False 129863.15562047994 654538.1051363893 379427.337340165 229783.13050930345 499446.25283346674 259410.7525321285 451931.28070838185 405877.20605220104 617403.6083722423 203699.25269214067 0.637523966849047 3.213257272600899 1.86268399282549 1.1280509254326252 2.4518806339869155 1.27349879345992 2.2186202194438325 1.992531640092075 3.0309566687775265 1.0 17.636081161960444 NELMYQLEQDHDLQAILQER ddPTM_KYSE-520_SHP099_60min_R1 1 NELMYQLEQDHDLQAILQER 20 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 153.82 1.0546e-06 138000000.0 202790.0 195150.0 147900.0 153270.0 246830.0 198210.0 155600.0 147360.0 161430.0 143500.0 False True 191540.83444815746 185774.70107387824 157433.87064836704 167836.73471769431 266254.1167294112 196972.89786773367 171329.56650965833 146848.84255408257 132118.38131913758 142228.70164131076 1.3467101382336168 1.306168859942116 1.1069064740913017 1.1800482798539842 1.8720139722633653 1.384902594164737 1.204606134574283 1.0324838858785579 0.9289150487524621 1.0 17.11785310351004 -7.125296400739131 2.523884593607994 0.974736279756223 1.3637696370198622 0.4393828360339077 0.1917811255768259 0.31568102565301814 3.8766455633560892 0.12235933392042325 0.06114913704942585 7.493825901975011e-08 7.125296400739131 0.3890333572636392 NELS(ph)NSILSLQPEPEIPPELPPPRPHVR ddPTM_KYSE-520_SHP099_60min_R1 1 NELSNSILSLQPEPEIPPELPPPRPHVR 28 1 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 NELS(0.499)NS(0.499)ILS(0.003)LQPEPEIPPELPPPRPHVR 76.47800000000001 0.010779 386660000.0 98699.0 116850.0 79260.0 73730.0 84502.0 88994.0 88291.0 82584.0 136700.0 93346.0 True False 93223.96971842134 111236.3506045741 84369.22642048387 80737.27703226711 91151.82664938908 88438.55543535185 97216.31591712235 82297.53537925055 111878.72592656939 92519.02706208898 1.0076194343879046 1.202307829393018 0.9119121666061639 0.8726559238251046 0.985222494700659 0.9558958653553636 1.050771057632081 0.8895201127009383 1.2092509992727034 1.0 16.497462474100296 -9.575331152253918 11.47282255494217 0.999999890534113 1.0036397971127984 0.0 0.11189051005898364 0.0 0.0 0.10710798401356827 0.025977501849112346 2.658697013625982e-10 9.575331152253918 0.0036399065786854035 NELSNS(ph)ILSLQPEPEIPPELPPPRPHVR ddPTM_KYSE-520_SHP099_60min_R1 1 NELSNSILSLQPEPEIPPELPPPRPHVR 28 1 A0A3B3ITT1;Q6IQ22 A0A3B3ITT1 RAB12 Ras-related protein Rab-12 1 NELS(0.242)NS(0.738)ILS(0.02)LQPEPEIPPELPPPRPHVR 60.193999999999996 0.024291999999999998 138980000.0 164590.0 175580.0 135840.0 116310.0 115950.0 158650.0 141440.0 143370.0 191320.0 150460.0 True False 155459.86459796934 167144.873249047 144596.46375168464 127364.06743012353 125074.60533474546 157659.80650177057 155738.13552137598 142872.68293280937 156581.11078472008 149127.04145610856 1.0424659611028673 1.1208220294388491 0.9696193416017217 0.8540642004730553 0.8387117729520418 1.0572180937967135 1.0443319601912253 0.9580601984574341 1.0499846926206566 1.0 17.186182362087038 -9.466841018333202 14.349104781625288 0.9999980778536814 0.9896665396709751 0.0 0.08588103899619377 0.0 0.0 0.09169023000983746 0.02223814724516107 3.4131783457092615e-10 9.466841018333202 -0.010331538182706379 NENLAANFLLQQNFDED ddPTM_KYSE-520_SHP099_60min_R1 14 NENLAANFLLQQNFDED 17 0 P54727;P54727-2 P54727 RAD23B UV excision repair protein RAD23 homolog B 0 ;;;;;;;;;;;;; 244.57 8.3031e-27 1314977000.0 1251949.0 1654782.0 5197828.0 728183.0 2136943.0 1450301.0 1355736.0 1038239.0 3583879.0 2094142.0 False True 1182500.893271542 1575283.788841578 5532888.309698843 797389.2933837974 2305108.2565575438 1441249.1334971588 1492787.0255882929 1034637.5912358036 2933136.915837511 2075589.5310978212 0.5697180851775125 0.7589572818901137 2.6656948432248004 0.38417484836804033 1.110580016916122 0.6943806142319734 0.7192110979663343 0.49847890237168563 1.4131584650487785 1.0 20.9850897336362 NENLAANFLLSQNFDDE ddPTM_KYSE-520_SHP099_60min_R1 6 NENLAANFLLSQNFDDE 17 0 P54725-2;P54725-3;P54725;K7EQ16 P54725-2 RAD23A UV excision repair protein RAD23 homolog A 0 ;;;;; 186.69 2.4505e-11 314485000.0 697923.0 815105.0 2885575.0 401130.0 1170289.0 801451.0 762590.0 596453.0 1953407.0 1151324.0 False True 659207.8199149916 775946.1323024519 3071583.781583244 439253.2745958681 1262384.0862664427 796448.8470258462 839680.039361185 594384.0437561763 1598717.5301831919 1141124.1650765182 0.5776828149728898 0.6799839632266667 2.691717409539985 0.38493030648107773 1.106263564387661 0.6979510831517973 0.7358358231813277 0.5208758713091662 1.401002256468725 1.0 20.12202434832513 NENTEGS(ph)PQEDGVELEGLK ddPTM_KYSE-520_SHP099_60min_R1 8 NENTEGSPQEDGVELEGLK 19 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 NENTEGS(1)PQEDGVELEGLK;NENTEGS(1)PQEDGVELEGLK;NENTEGS(1)PQEDGVELEGLK;NENTEGS(1)PQEDGVELEGLK;NENTEGS(1)PQEDGVELEGLK;NENTEGS(1)PQEDGVELEGLK;NENTEGS(1)PQEDGVELEGLK;NENTEGS(1)PQEDGVELEGLK 334.57 5.4184e-54 2617550000.0 4848140.0 5267460.0 4203670.0 4282680.0 4403490.0 5016300.0 4538830.0 5170510.0 5772640.0 5207540.0 True False 4579204.009672517 5014403.314981351 4474645.294309813 4689704.61956531 4750019.610569201 4984991.410997999 4997659.23111204 5152574.707616101 4724474.092412233 5161405.2470048135 0.8872010219174031 0.971519009845474 0.8669432218883548 0.908610038377972 0.9202958076825413 0.9658205803333911 0.9682749158307621 0.9982891210889056 0.9153464737445034 1.0 22.29933247739078 -6.228172767463757 3.2256715905927944 0.9702170264935294 0.9103909115569849 0.4449135651190732 0.032953334350655984 0.24753961841796446 5.279394796207815 0.011426205129902082 0.010900458462874928 5.913263507872529e-07 6.228172767463757 -0.05982611493654444 NENTFLDLTVQQIEHLNK ddPTM_KYSE-520_SHP099_60min_R1 2 NENTFLDLTVQQIEHLNK 18 0 E7EUC7;A0A087WYS1;Q16851-2;Q16851;C9JWG0;C9JVG3;C9JQU9;C9JNZ1 E7EUC7 UGP2 UTP--glucose-1-phosphate uridylyltransferase 0 ; 212.76 6.1136e-18 250050000.0 354640.0 296052.0 202772.0 273161.0 344240.0 274419.0 222828.0 289090.0 264576.0 195098.0 False True 334967.4122426868 281829.2175368886 215843.0075666712 299122.1393111506 371329.7295423272 272706.24923044036 245353.62883171046 288087.21426411305 216535.66781820092 193369.58350394716 1.7322652620589074 1.4574640562906098 1.1162200572370025 1.5468934353113748 1.9203109548754207 1.4102851352776158 1.2688325867273855 1.4898269368110444 1.1198021110377003 1.0 17.561001355192246 -7.809436975117655 0.9914084671489722 0.9924335588955836 1.5139757615240375 0.4030747887749574 0.21159368013061247 0.5797286605767473 1.2322383383090811 0.21331580654922272 0.07374658259701079 1.550825826548617e-08 7.809436975117655 0.5215422026284539 NES(ph)PPQVPVYNNSHK ddPTM_KYSE-520_SHP099_60min_R1 2 NESPPQVPVYNNSHK 15 0 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 NES(1)PPQVPVYNNSHK;NES(1)PPQVPVYNNSHK 128.41 0.00010735 563650000.0 666640.0 623690.0 605490.0 637160.0 550840.0 546280.0 567350.0 628190.0 669120.0 605110.0 True False 629660.1502861062 593726.9962222244 644520.8542182543 697715.494830861 594187.9741491257 542870.4638877233 624703.2748024077 626010.9555106487 547624.6751425463 599749.196168456 1.0498724371933112 0.9899588028050644 1.0746506345249407 1.1633454438759905 0.9907274206370621 0.9051624701723539 1.0416075232670137 1.043787902526536 0.9130894691332456 1.0 19.19399979334225 -5.960727191185236 24.99498311030692 0.98290139599822 1.065760342612893 0.34885713483267256 0.058277930894106954 200.4841267295145 127596.32685458817 0.018909498531193464 0.02144132490114311 1.0946437678093196e-06 5.960727191185236 0.08285894661467297 NES(ph)SPIRFDILLDDLDTVPVSTLQR ddPTM_KYSE-520_SHP099_60min_R1 2 NESSPIRFDILLDDLDTVPVSTLQR 25 1 F5H1U6;A0A0A0MTP3;Q99550-2;Q99550 F5H1U6 MPHOSPH9 M-phase phosphoprotein 9 1 NES(0.572)S(0.428)PIRFDILLDDLDTVPVSTLQR;NES(0.5)S(0.5)PIRFDILLDDLDTVPVSTLQR 148.76 5.707e-07 257520000.0 59082.0 75179.0 68734.0 59764.0 63191.0 71204.0 47883.0 66696.0 78227.0 61813.0 True False 55804.60368295294 71567.28799402046 73164.70361828833 65443.952591298184 68163.77219239248 70759.58942421722 52723.48093304612 66464.64714296338 64022.948742192784 61265.38490978631 0.9108667768124789 1.1681520992548038 1.1942258050940813 1.0682043814409203 1.1125984484185334 1.154968495316094 0.8605753642237259 1.0848645975346929 1.0450101445778395 1.0 15.902784557475815 -6.7013908661508 24.999998684289466 1.0046760049464238 1.1077376927736244 0.23579321387649954 0.09085689807725161 108.51836359759159 45178.743472399474 0.03429264321651488 0.026562954058870006 1.9888825338472085e-07 6.7013908661508 0.1030616878272006 NFAFLEFR ddPTM_KYSE-520_SHP099_60min_R1 2 NFAFLEFR 8 0 P26368-2;P26368;K7ENG2 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 0 ; 126.41 0.0064954999999999995 539040000.0 571830.0 672820.0 457270.0 570360.0 914140.0 820810.0 633590.0 493210.0 468790.0 501940.0 False True 540109.4499851565 640496.7172765902 486746.3558578685 624566.8429150129 986077.617254889 815687.0203259903 697639.4604425097 491499.16962607886 383669.5532342094 497493.20210341044 1.0856619702572092 1.2874481793290002 0.978398003831803 1.2554278938372077 1.9820926458607568 1.6395943037558112 1.4023095340657465 0.9879515288812215 0.7712056197191187 1.0 18.924317286809273 -7.331903442069047 4.18625555680158 0.8880071160954011 1.3865976764888541 0.3759828926060125 0.27047525004004447 0.27334318205611774 9.299509215769486 0.1794637691554965 0.08196529190822394 4.6568962011543536e-08 7.331903442069047 0.49859056039345306 NFCKDVVS(ph)NK ddPTM_KYSE-520_SHP099_60min_R1 1 NFCKDVVSNK 10 1 Q9BY64-2;P36537-2;P36537;Q9BY64;O75310 Q9BY64-2 UGT2B28;UGT2B10;UGT2B11 UDP-glucuronosyltransferase 2B28;UDP-glucuronosyltransferase 2B10;UDP-glucuronosyltransferase 2B11 1 NFCKDVVS(1)NK 63.943999999999996 0.06749 0.0 457540.0 489100.0 301560.0 344990.0 350300.0 493660.0 368160.0 466640.0 408730.0 473430.0 True False 432159.344116623 465602.9018459324 320999.0401130595 377777.74587497395 377866.6170656435 490578.88482612075 405377.20569534623 465021.3347545942 334514.9352448188 469235.7785229664 0.9209854915090864 0.992257886454291 0.6840890119749222 0.8050915193724596 0.8052809149700189 1.0454848229398384 0.8639094123883082 0.9910184944088488 0.7128930711502559 1.0 18.839953495326093 NFDEILR ddPTM_KYSE-520_SHP099_60min_R1 6 NFDEILR 7 0 P30041 P30041 PRDX6 Peroxiredoxin-6 0 ;;;;; 125.58 0.017128 4643747000.0 8140080.0 8213270.0 6040110.0 5343910.0 7999720.0 7981570.0 6112540.0 6344220.0 6674010.0 6926540.0 False True 7688533.535552826 7818692.1808303865 6429465.1551177 5851793.599694877 8629252.451819485 7931754.061016938 6730455.19584156 6322213.381572082 5462178.022100832 6865176.244366584 1.1199324331785177 1.138891690835503 0.9365331531573687 0.8523879637462669 1.2569600757009645 1.1553605877963533 0.980376170439095 0.9209105719259507 0.7956355128658172 1.0 22.71086532736732 -7.072172481826119 3.3634927771300056 0.8948740339125764 1.0710847587531338 0.29920605219603835 0.11707855645347384 0.34105781720827527 7.453170554979238 0.06423610225205884 0.03571603911559164 8.468910011233223e-08 7.072172481826119 0.17621072484055744 NFDFEGS(ph)LS(ph)PVIAPK ddPTM_KYSE-520_SHP099_60min_R1 1 NFDFEGSLSPVIAPK 15 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 2 NFDFEGS(1)LS(1)PVIAPK 109.54 0.00031394 0.0 87174.0 80693.0 72799.0 70361.0 73883.0 71274.0 72641.0 77225.0 92738.0 74688.0 True False 82338.28444293923 76816.38715733767 77491.74002251837 77048.08828519391 79697.17176323416 70829.15252825206 79984.26118784114 76957.1244994505 75899.11693473432 74026.32242638466 1.1122838707112646 1.037690170732547 1.0468133156226946 1.0408201536934951 1.0766058497973996 0.956810364295592 1.0804840571052456 1.0395913504413292 1.0252990348157853 1.0 16.17575073787961 -1.6482423880879802 1.2395260461955715 1.0341292702255855 65.07474902861239 0.323149042621686 0.03388748923550067 1499.8333595242332 3.7320918528332974 0.009612279619938775 272571.698566514 0.022477997155044505 1.6482423880879802 64.0406197583868 NFDFEGSLS(ph)PVIAPK ddPTM_KYSE-520_SHP099_60min_R1 13 NFDFEGSLSPVIAPK 15 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 NFDFEGS(0.349)LS(0.651)PVIAPK;NFDFEGS(0.002)LS(0.998)PVIAPK;NFDFEGS(0.085)LS(0.915)PVIAPK;NFDFEGS(0.011)LS(0.989)PVIAPK;NFDFEGS(0.025)LS(0.975)PVIAPK;NFDFEGS(0.003)LS(0.997)PVIAPK;NFDFEGS(0.089)LS(0.911)PVIAPK;NFDFEGS(0.08)LS(0.92)PVIAPK;NFDFEGS(0.34)LS(0.66)PVIAPK;NFDFEGS(0.097)LS(0.903)PVIAPK;NFDFEGSLS(1)PVIAPK;NFDFEGSLS(1)PVIAPK;NFDFEGS(0.005)LS(0.995)PVIAPK 337.52 2.7468999999999995e-54 12173102000.0 5958435.0 6297421.0 5286178.0 4567133.0 4911739.0 6652302.0 5130929.0 6196530.0 7524430.0 6309696.0 True False 5627908.732704301 5994883.44253837 5626933.492063843 5001191.9471613895 5298264.915327965 6610782.515671869 5649613.376361409 6175035.6837109765 6158183.187444446 6253797.002309211 0.8999186783047483 0.9585989823981756 0.8997627345412876 0.7997048745449689 0.8472076905233068 1.057083003050921 0.9033893128087294 0.9874058402328775 0.9847110779532083 1.0 22.576300959595294 -6.245609918835676 24.867687872233237 0.9805351830645207 0.8818691913850967 0.5082013822537547 0.05171112329712333 740.7116774667458 1163639.8403786423 0.018190942649405198 0.01813527960108897 5.680546001805268e-07 6.245609918835676 -0.09866599167942403 NFEDVAFDEKK ddPTM_KYSE-520_SHP099_60min_R1 2 NFEDVAFDEKK 11 1 H7BZ94;P07237;H0Y3Z3 H7BZ94 P4HB Protein disulfide-isomerase 0 ; 192.63 1.7225e-06 736090000.0 1621640.0 1521360.0 995930.0 919860.0 1671860.0 1508400.0 1059770.0 1235220.0 1285610.0 1213590.0 False True 1531684.3965408064 1448271.5819920853 1060129.2413443425 1007283.2178340056 1803425.8704178326 1498985.5160874305 1166901.8939584887 1230935.3101225148 1052175.631590761 1202838.5367587325 1.2733915232448478 1.2040448802835306 0.8813562327334921 0.8374218043830834 1.499308357111248 1.2462067603243907 0.9701234690259578 1.023358723972624 0.874743865810984 1.0 20.19801156441399 -6.784477606023599 23.7675406520104 0.969002844682749 1.1476054259970763 0.20559465982043057 0.18229883588492235 266.64745050988637 275084.1859241976 0.08336051601098203 0.05625411192106429 1.6425643547389148e-07 6.784477606023599 0.17860258131432727 NFEES(ph)PERK ddPTM_KYSE-520_SHP099_60min_R1 6 NFEESPERK 9 1 Q6MZP7-3;Q6MZP7;Q6MZP7-4;Q6MZP7-2 Q6MZP7-3 LIN54 Protein lin-54 homolog 1 NFEES(1)PERK;NFEES(1)PERK;NFEES(1)PERK;NFEES(1)PERK;NFEES(1)PERK;NFEES(1)PERK 102.97 0.0021447 2180630000.0 3979900.0 3734470.0 3454060.0 3387090.0 3575450.0 3609240.0 3249860.0 3561640.0 4302220.0 3698770.0 True False 3759127.013266046 3555060.455646248 3676714.234291405 3708998.0152342627 3856817.5734723187 3586713.3943803958 3578387.5643771114 3549285.5021330235 3521045.2981404928 3666001.775399513 1.0254023984634826 0.9697377888636798 1.0029221095755538 1.0117283739804146 1.0520501106555005 0.9783719741896534 0.9761008814533775 0.9681625158913705 0.9604592452104791 1.0 21.805776053881583 -6.488111511669069 24.88950576138208 0.9740573641021382 1.0100166406529747 0.4079558640140578 0.021391673241845575 615.4472465877247 440592.9842177306 0.007770487131049628 0.006849379606177916 3.250038370260843e-07 6.488111511669069 0.03595927655083653 NFEHLNSDFDR ddPTM_KYSE-520_SHP099_60min_R1 1 NFEHLNSDFDR 11 0 P48163 P48163 ME1 NADP-dependent malic enzyme 0 100.38 0.0026607 272930000.0 188370.0 193930.0 162710.0 144170.0 188740.0 191030.0 152490.0 174550.0 188490.0 188100.0 False True 177920.74059371446 184613.31170513527 173198.54694520478 157871.87345370906 203592.76421629888 189837.71091101939 167905.1773589832 173944.52679027605 154264.967446226 186433.5803395857 0.954338484889014 0.9902363692681606 0.9290093910642412 0.8467995581383356 1.0920391264570364 1.0182592136311126 0.9006166005777859 0.933010708014291 0.8274526893987386 1.0 17.508302215470184 -6.787627040406124 24.992725143063808 0.9096875249312986 0.9704605072850035 0.13025760543315457 0.07090308693481695 476.17795026265816 454445.43805848365 0.030536162807928723 0.0205946572661973 1.6306958261158318e-07 6.787627040406124 0.060772982353704985 NFELVDS(ph)SPCKK ddPTM_KYSE-520_SHP099_60min_R1 4 NFELVDSSPCKK 12 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 NFELVDS(0.576)S(0.424)PCKK;NFELVDS(0.617)S(0.383)PCKK;NFELVDS(0.519)S(0.481)PCKK;NFELVDS(0.794)S(0.206)PCKK 137.52 2.6384e-05 18037840000.0 13839440.0 13073760.0 11628580.0 10336030.0 12390000.0 12742030.0 11226770.0 10834770.0 13004000.0 12561330.0 True False 13071738.674960345 12445676.945486167 12378176.873185834 11318363.18355926 13365022.510543294 12662502.264353972 12361681.474316422 10797186.71172434 10642801.4041632 12450046.388766853 1.0499349373311908 0.9996490420080179 0.9942273696549545 0.9091020892718389 1.073491784143229 1.017064665379786 0.9929024429555412 0.8672406812448653 0.8548403011386164 1.0 23.569647781984347 -7.199242707455944 6.299298214138859 0.8960108126193996 1.00446569542124 0.3998947307016161 0.054444038660016514 0.20471141906190887 16.421874368471645 0.025886606641974202 0.014701462782757982 6.320585238614895e-08 7.199242707455944 0.10845488280184046 NFELVDSS(ph)PCK ddPTM_KYSE-520_SHP099_60min_R1 3 NFELVDSSPCK 11 0 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 NFELVDS(0.072)S(0.928)PCK;NFELVDS(0.013)S(0.987)PCK;NFELVDS(0.008)S(0.992)PCK 200.19 3.5285e-07 1742230000.0 3724550.0 3431350.0 2827590.0 2851860.0 3223870.0 3412050.0 3114010.0 3190970.0 3598000.0 3417190.0 True False 3517941.786793652 3266502.7954386463 3009860.975703965 3122899.9169570287 3477570.22768888 3390754.1303143185 3428804.5206088787 3179901.2698479956 2944693.898198953 3386916.355133587 1.0386857595291565 0.9644474362313588 0.8886729579671742 0.9220481374521146 1.026765902387252 1.0011331177916203 1.0123676409698756 0.9388780047751057 0.869432129239226 1.0 21.691540927126404 -8.995857712876973 0.0017421084598432926 0.32138734683819864 1.6017449702471283 0.001070048178013927 0.05608593955775512 2133430.8001638046 1131.8661294416959 418543.19162483397 413315.0910620956 1.0095835999642214e-09 8.995857712876973 1.2803576234089296 NFELVDSS(ph)PCKK ddPTM_KYSE-520_SHP099_60min_R1 4 NFELVDSSPCKK 12 1 A0A087WUU7;Q96GX5-2;Q96GX5-3;Q96GX5 A0A087WUU7 MASTL Serine/threonine-protein kinase greatwall 1 NFELVDS(0.35)S(0.65)PCKK;NFELVDS(0.274)S(0.726)PCKK;NFELVDS(0.202)S(0.798)PCKK;NFELVDS(0.042)S(0.958)PCKK 135.47 2.8691e-05 2245270000.0 4808420.0 4655310.0 4284630.0 4062890.0 4359410.0 4449360.0 3972980.0 3937070.0 5078330.0 4487400.0 True False 4541687.357252375 4431661.91983723 4560824.105450392 4449025.844047576 4702470.765350087 4421589.893833715 4374607.59094822 3923413.223089042 4156233.2862814553 4447645.127144368 1.0211442746486357 0.9964063663241495 1.025446944410039 1.000310437740363 1.0572945077498417 0.9941417913152206 0.9835783804444304 0.8821327041458652 0.9344795206154374 1.0 22.0846102508808 -6.955438311576525 3.0704638662341783 0.9310785363080966 1.016724107504016 0.5242795973697494 0.03218588568640144 0.17306413936158685 3.324550555192556 0.014879674580437843 0.008969975702709021 1.1080559456148197e-07 6.955438311576525 0.08564557119591953 NFEWVAER ddPTM_KYSE-520_SHP099_60min_R1 6 NFEWVAER 8 0 E9PBS1;P22234;P22234-2;D6RF62 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 0 ;;;;; 152.79 0.0027316999999999997 1829500000.0 1927480.0 1784010.0 1092040.0 978520.0 1615130.0 1624280.0 1251920.0 1248080.0 1177630.0 1361310.0 False True 1820558.8420638808 1698303.4817463965 1162434.6457257797 1071518.246597235 1742231.5421673781 1614142.2660239276 1378476.2911617707 1243750.7017840615 963802.0776364738 1349249.8524831533 1.3493118703799245 1.2587019954983478 0.861541428806859 0.7941585056505418 1.2912593905131677 1.196325693905593 1.0216612502308813 0.9218090329934581 0.7143243898546269 1.0 20.363726098901292 -7.215847070926792 2.792868183944255 0.8526407043492281 1.1108175198295012 0.26856618265613785 0.18047786096486432 0.416626992858911 6.376479154226156 0.11691603421999859 0.05542462932288892 6.083491829051137e-08 7.215847070926792 0.25817681548027305 NFHENCYR ddPTM_KYSE-520_SHP099_60min_R1 2 NFHENCYR 8 0 Q8WUP2-3;Q8WUP2 Q8WUP2-3 FBLIM1 Filamin-binding LIM protein 1 0 ; 114.89 0.0017346 1524290000.0 2410780.0 2282600.0 2028950.0 1693900.0 2263260.0 2166440.0 1595370.0 1733710.0 2128470.0 1594210.0 False True 2277049.2276292136 2172940.4697475485 2159739.363434782 1854887.7467103957 2441365.6858121282 2152918.444359886 1756645.568910758 1727696.164660955 1741993.5023622906 1580086.5396766136 1.4410914658479674 1.375203455750133 1.3668487827741398 1.173915288899318 1.5450835283438256 1.362531981824559 1.111740100811364 1.0934186965573112 1.1024671488681965 1.0 20.591572144779253 -6.7778678409264765 4.77331577574917 1.0800821253814314 1.3766681941876957 0.7292003814414152 0.08994502034538546 0.1063596971960108 6.1169917124615 0.03803134457951732 0.026532126023487423 1.6677546456071315e-07 6.7778678409264765 0.29658606880626426 NFIQYFHK ddPTM_KYSE-520_SHP099_60min_R1 1 NFIQYFHK 8 0 B0QY89;Q9Y262-2;Q9Y262;H7C3A0;C9JHP4;C9K0Q7 B0QY89 EIF3L Eukaryotic translation initiation factor 3 subunit L 0 70.919 0.054041 0.0 103910.0 121190.0 78541.0 88113.0 122070.0 85991.0 65989.0 80224.0 84394.0 66130.0 False True 98145.90516055038 115367.8504901014 83603.87853004318 96487.2330278606 131676.21451670874 85454.29827225815 72659.81211057738 79945.72166842245 69070.17699961159 65544.13964836147 1.4974016851406473 1.760155081888934 1.275535524282882 1.4720955000020763 2.008970065411493 1.303767182401248 1.1085630614787358 1.219723412303895 1.053796378595661 1.0 16.000179173296157 -6.509677095416154 16.201708967065777 1.1270111856201972 1.5931522974345 0.6165773121014461 0.1886599675225214 4.520430499502347 5548.892435588737 0.06943938569309317 0.05825596850404576 3.09259396878369e-07 6.509677095416154 0.46614111181430284 NFITAEELR ddPTM_KYSE-520_SHP099_60min_R1 5 NFITAEELR 9 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ;;;; 199.46 1.7626e-05 2334500000.0 2035380.0 2264200.0 1543470.0 1596300.0 2283120.0 2395910.0 1913410.0 2159790.0 1987780.0 2192230.0 False True 1922473.4139705612 2155424.433366514 1642964.5458393157 1748011.8720549045 2462788.554824184 2380956.23697231 2106836.1558820396 2152298.192588773 1626849.2598560075 2172808.5477291327 0.8847873025811666 0.9919992424639587 0.7561478656536156 0.8044941989398026 1.133458609318395 1.095796608247293 0.9696372734192146 0.9905604406969977 0.7487310658623266 1.0 21.051129629526717 -5.7357844330378 24.999999368493267 0.9935274156110184 0.8614594908731492 0.24922387338091656 0.11068283198136294 350.316307004678 341371.44728887064 0.03453253920848155 0.04456510991291286 1.8374501561352138e-06 5.7357844330378 -0.1320679247378692 NFKPS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 2 NFKPSPSK 8 1 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 NFKPS(0.911)PS(0.089)K;NFKPS(0.97)PS(0.03)K 94.76700000000001 0.002365 4108100000.0 10396300.0 9932400.0 9395600.0 8528900.0 9787000.0 9967100.0 9548300.0 8973000.0 10273500.0 9560100.0 True False 9819596.514489746 9455232.595163647 10001255.409491522 9339484.09169271 10557181.219587363 9904891.631791992 10513535.346427843 8941874.757313943 8408091.373859635 9475404.951645251 1.0363247338346981 0.9978710823880829 1.0554963572037062 0.9856554035794596 1.1141667584090196 1.0453264723078846 1.1095605306665375 0.9436931511577592 0.8873595816503552 1.0 23.175756170575845 -7.350747285095866 7.765555920185757 0.9353134691869802 1.0472771052717615 0.5210328848620953 0.04615757731125393 0.2296775069197384 17.802441787672343 0.024980087105989084 0.011910377197540413 4.459156501512685e-08 7.350747285095866 0.11196363608478133 NFLNALT(ph)SPIEYQR ddPTM_KYSE-520_SHP099_60min_R1 3 NFLNALTSPIEYQR 14 0 E7EPJ7;O75962-4;O75962;O75962-5;O75962-2;E7EWP2 E7EPJ7 TRIO Triple functional domain protein 1 NFLNALT(0.5)S(0.5)PIEYQR;NFLNALT(0.642)S(0.358)PIEYQR;NFLNALT(0.703)S(0.297)PIEYQR 146.2 2.3301999999999998e-05 219482000.0 474460.0 468459.0 428505.0 372397.0 402792.0 523991.0 474736.0 599242.0 695217.0 583145.0 True False 448140.75798743905 445953.52646870574 456127.1179322415 407789.4989147594 434489.4388270188 520720.5778044073 522726.94785687095 597163.3693661343 568983.1177943808 577978.7889799449 0.7753584846571056 0.7715742082088409 0.7891762234687622 0.7055440557506499 0.7517394186624641 0.9009337154455258 0.9044050712992668 1.0331925336222936 0.984435983885429 1.0 19.140657023226872 -6.628587941291234 1.5315904384080001 1.002221637239173 0.7570852203977088 0.9073073598317699 0.033940466866523904 0.11088072711085373 0.5306302924459315 0.018544495578502074 0.012490353675400582 2.3518632109632297e-07 6.628587941291234 -0.24513641684146426 NFLNALTS(ph)PIEYQR ddPTM_KYSE-520_SHP099_60min_R1 1 NFLNALTSPIEYQR 14 0 E7EPJ7;O75962-4;O75962;O75962-5;O75962-2;E7EWP2 E7EPJ7 TRIO Triple functional domain protein 1 NFLNALT(0.328)S(0.672)PIEYQR 166.35 3.1449e-08 165560000.0 215380.0 188820.0 187580.0 161550.0 177590.0 221970.0 209190.0 256500.0 288650.0 232960.0 True False 203432.4420506146 179748.803775402 199671.7069386115 176903.66342822122 191565.3226511208 220584.60289440944 230336.96669765725 255610.26136754995 236238.4362743545 230896.15564013735 0.8810559945730484 0.7784833111537338 0.8647684340392802 0.7661611469353955 0.8296600786618746 0.9553411674735764 0.9975781799357819 1.1070355877467735 1.0231371571319852 1.0 17.81688462725832 -6.491926343196061 1.9995519634742491 1.0452487618926567 0.8186656103826359 0.8414260582585962 0.04283483809526872 0.11540274540719779 0.9229529295615605 0.01827818869315553 0.014289507877670056 3.2216151342896e-07 6.491926343196061 -0.22658315151002084 NFLYAWCGK ddPTM_KYSE-520_SHP099_60min_R1 2 NFLYAWCGK 9 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ; 160.75 0.00227 347300000.0 1024750.0 1131100.0 868260.0 797160.0 1234250.0 996700.0 848770.0 804480.0 807930.0 663370.0 False True 967905.0747115206 1076760.2581842872 924229.4288651198 872921.8467251065 1331378.4530781354 990479.2255929082 934571.9547969331 801689.4466470432 661230.2782578869 657493.0578940505 1.472114516025035 1.6376754784805623 1.4056869768715514 1.3276518074899135 2.0249315747036767 1.5064481878567844 1.4214172204195827 1.219312412536877 1.005684045358299 1.0 19.326616136302285 -7.351383960194382 1.6851613541341741 0.9957337478422297 1.5662128838830245 0.6160898885814293 0.17714363997311985 0.2728946851571272 1.3883302671629036 0.1499253661329159 0.05463221192939744 4.4526241737263405e-08 7.351383960194382 0.5704791360407948 NFMEST(ph)PEPRPNEWEK ddPTM_KYSE-520_SHP099_60min_R1 1 NFMESTPEPRPNEWEK 16 1 O43491;H0Y5B0;E9PMV8;Q6ZSX4;Q6R5J7;E9PMG5;E9PN54 O43491 EPB41L2 Band 4.1-like protein 2 1 NFMES(0.114)T(0.886)PEPRPNEWEK 121.44 0.00036272 425040000.0 398490.0 425570.0 349650.0 421760.0 419160.0 349990.0 353470.0 446950.0 507770.0 417380.0 True False 376384.9653298794 405124.9784064069 372188.9984597806 461843.94359323184 452145.5073058376 347805.5825878012 389202.19713476236 445399.63476891414 415571.76784004463 413682.3379167267 0.9098405487295539 0.9793141772660297 0.8996975803562137 1.116421711207308 1.09297754790018 0.8407552141078203 0.940823819297569 1.0766706575192777 1.0045673449169548 1.0 18.658163837753406 NFQTAHR ddPTM_KYSE-520_SHP099_60min_R1 2 NFQTAHR 7 0 O75475;O75475-3;O75475-2;V9GYT7 O75475 PSIP1 PC4 and SFRS1-interacting protein 0 ; 122.74 0.004076099999999999 113014000.0 169693.0 167751.0 129057.0 132098.0 190929.0 154276.0 133715.0 157838.0 152893.0 137980.0 False True 160279.791015391 159691.99016061574 137376.22071850108 144652.55420328825 205954.02606259272 153313.10625822362 147232.21713264132 157290.49681766614 125131.48531888069 136757.60454681562 1.1719991114682264 1.1677009895705586 1.0045234498932283 1.0577295111495608 1.5059786016659087 1.121057266001911 1.076592542115199 1.1501407716147996 0.9149874022255559 1.0 17.06126153222207 -7.752291401252728 23.872943218211013 0.957493705531981 1.1566916869477355 0.2764179448191554 0.12909211350410457 135.4891429953108 353590.14311987744 0.0942479562398123 0.03440535460015483 1.7689216557397207e-08 7.752291401252728 0.1991979814157545 NFRNPLAK ddPTM_KYSE-520_SHP099_60min_R1 2 NFRNPLAK 8 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 98.39200000000001 0.0032814999999999997 1382540000.0 2167800.0 2335700.0 1909120.0 1496230.0 2147400.0 1810740.0 1652370.0 1556820.0 2413200.0 1317140.0 False True 2047547.812597837 2223489.4660428236 2032184.9299000022 1638431.2493420467 2316388.1629653513 1799438.5000001013 1819407.6851771479 1551419.754784518 1975023.7118214879 1305471.1643194137 1.5684358786011892 1.7032084099705136 1.5566678035048358 1.255049743052897 1.7743694585341245 1.3783824179205133 1.3936789527830487 1.1883983324850576 1.5128819125247661 1.0 20.316139160599725 -11.216952324054901 0.0902628893176403 5.202724230346059e-14 1.985324324202232 0.5263511437894215 0.1558905739384509 79.23883866975281 0.9464259996367103 20.95811518133448 4.538685354205418 6.0680293949712835e-12 11.216952324054901 1.98532432420218 NFS(ph)AAK ddPTM_KYSE-520_SHP099_60min_R1 4 NFSAAK 6 0 Q13557-9;Q13557-3;H0Y9J2;Q13555-2;A0A2Q3DQE3;E9PF82;Q13554-5;H0Y6G2;E9PBG7;Q8WU40;Q13554-4;Q13557-10;Q13555-3;Q13555-8;Q13555-9;Q13554-3;Q13557-8;Q13555-7;Q13555-4;Q13557-11;Q13555-10;Q13557-4;Q13557-12;Q13557-6;Q13557;Q13557-5;Q13555 Q13557-9 CAMK2D;CAMK2G Calcium/calmodulin-dependent protein kinase type II subunit delta;Calcium/calmodulin-dependent protein kinase type II subunit gamma 1 NFS(1)AAK;NFS(1)AAK;NFS(1)AAK;NFS(1)AAK 86.898 0.016481 1912490000.0 3451130.0 4083720.0 3794450.0 4031710.0 3997310.0 3130650.0 3535710.0 3674290.0 4369980.0 4618740.0 True False 3259688.9392429083 3887531.961411309 4039046.318334655 4414882.5062221885 4311875.555417261 3111110.4520943486 3893134.072004269 3661544.7455757363 3576501.790231087 4577821.55692535 0.7120611624347034 0.849210025569964 0.8823075054606195 0.9644068584419446 0.9419055552513259 0.6796050071868455 0.8504337758894768 0.7998443582923267 0.7812671913391945 1.0 22.126229797190188 NFS(ph)CGS(ph)VEFDEADLESLR ddPTM_KYSE-520_SHP099_60min_R1 2 NFSCGSVEFDEADLESLR 18 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 2 NFS(1)CGS(1)VEFDEADLESLR;NFS(1)CGS(1)VEFDEADLESLR 120.4 6.756e-05 44248000.0 99722.0 79079.0 76597.0 81569.0 110743.0 206992.0 237300.0 306680.0 389210.0 279600.0 True False 94190.22186912145 75279.92614000107 81534.56517953312 89321.29323538586 119457.84405852275 205700.08614821642 261288.59982481934 305616.1986596501 318539.2751856624 277122.9615255084 0.33988602514429866 0.27164810063229555 0.29421800608185295 0.3223164646613525 0.4310644033281486 0.7422700920049251 0.9428616033347654 1.1028180305857442 1.1494510358584695 1.0 18.080166727322425 -6.475345554820563 1.3537314458499032 1.0982501557379307 0.2942221377677956 0.9848697851974458 0.04245998389452295 0.04497313636394864 0.16734007832736364 0.022073213365248586 0.01662727123105738 3.346990234184654e-07 6.475345554820563 -0.8040280179701351 down NFS(ph)CGSVEFDEADLESLR ddPTM_KYSE-520_SHP099_60min_R1 3 NFSCGSVEFDEADLESLR 18 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 NFS(0.993)CGS(0.007)VEFDEADLESLR;NFS(0.998)CGS(0.002)VEFDEADLESLR;NFS(0.996)CGS(0.004)VEFDEADLESLR 315.96 1.1100999999999997e-47 281980000.0 327533.0 288072.0 273623.0 233340.0 209088.0 329164.0 309467.0 359599.0 429111.0 405769.0 True False 309364.0915691522 274232.5887151125 291261.17639227933 255516.5634437707 225542.03605201608 327109.5653788137 340750.9444668669 358351.63500003715 351195.2594080187 402174.2023435049 0.769229079753152 0.68187513549386 0.724216458179253 0.6353380250519624 0.5608068213668668 0.8133529288370989 0.8472720091972106 0.8910358568796563 0.8732416384779846 1.0 18.617461016684864 -6.5303160825392785 3.3744805213645988 0.8926348361560785 0.6751547530772847 0.7365472112176428 0.06429054876959536 0.13476789294340671 3.2377766843399347 0.026161255144734167 0.020780162981700708 2.949062097543202e-07 6.5303160825392785 -0.21748008307879385 NFS(ph)DNQLQEGK ddPTM_KYSE-520_SHP099_60min_R1 2 NFSDNQLQEGK 11 0 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 1 NFS(1)DNQLQEGK;NFS(1)DNQLQEGK 208.79 1.4935e-09 1036910000.0 2039220.0 1024640.0 808560.0 765430.0 890080.0 954830.0 829800.0 862670.0 1104510.0 902820.0 True False 1926100.4015157104 975414.7563840039 860681.0713417423 838176.2370650781 960124.2321375621 948870.5517937962 913684.2820675747 859677.5991186921 903958.8264312738 894821.7171833314 2.1524962621365282 1.0900660295263718 0.9618464268513117 0.9366963507584967 1.0729782410285997 1.0604017912982675 1.021079690537259 0.9607250054510703 1.0102110946487797 1.0 19.77124074524208 -4.261174290839684 4.30080043162686 1.0051519220882141 2.238895788591304 0.9861068111366994 0.04070310268892273 0.023032961656499068 1.0069771233333271 0.011183661538175906 0.08726898682233189 5.4805697483540225e-05 4.261174290839684 1.23374386650309 up NFS(ph)GPR ddPTM_KYSE-520_SHP099_60min_R1 1 NFSGPR 6 0 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 NFS(1)GPR 79.71300000000001 0.055291999999999994 0.0 243390.0 210590.0 203190.0 201710.0 239330.0 183620.0 180300.0 209320.0 267100.0 215080.0 True False 229888.671514064 200472.9402979655 216287.95251549466 220880.45775367733 258163.90939857374 182473.95946961932 198526.48355842798 208593.9177756553 218601.37304306304 213174.55852970807 1.0784057586404086 0.9404168193458581 1.0146049041089147 1.0361483062384078 1.2110446536357946 0.8559837568242915 0.9312860077097862 0.9785122540623702 1.025457139683011 1.0 17.701675743335095 -6.292945212891791 24.99979828662783 0.9552197610401932 1.0462796344209082 0.286249251183301 0.07641610402453994 1022.2468268389977 811146.6248330673 0.02800691233279975 0.0247021158533799 5.093951282073652e-07 6.292945212891791 0.09105987338071497 NFS(ph)INSVASTYSEFAR ddPTM_KYSE-520_SHP099_60min_R1 1 NFSINSVASTYSEFAR 16 0 O43663-2;O43663-4 O43663-2 PRC1 Protein regulator of cytokinesis 1 1 NFS(0.999)INS(0.001)VASTYSEFAR 76.52600000000001 0.022421 0.0 56075.0 51224.0 47506.0 55840.0 42038.0 43838.0 55462.0 62132.0 68023.0 53315.0 True False 52964.40796725884 48763.12215120847 50568.31277228746 61147.016811091824 45346.15143649878 43564.390781119575 61068.64021695808 61916.478593717795 55671.737920285595 52842.67057844231 1.0023037705604947 0.9227982162412106 0.9569598246784542 1.1571522813238995 0.858135119594016 0.8244169021785227 1.1556690747925908 1.1717136533023227 1.0535375542317391 1.0 15.689415759323358 -6.783922121928182 24.999957224006426 1.1095395747684655 0.9572883093841965 0.33973692448856463 0.09580010366860515 275.31985049637564 306142.3438015956 0.041554684981315884 0.028038784216822085 1.6446666198510636e-07 6.783922121928182 -0.15225126538426903 NFS(ph)S(ph)EIEDLEK ddPTM_KYSE-520_SHP099_60min_R1 1 NFSSEIEDLEK 11 0 Q7Z3K6-3;Q7Z3K6;Q7Z3K6-2;A8MQD4;Q7Z3K6-5 Q7Z3K6-3 MIER3 Mesoderm induction early response protein 3 2 NFS(1)S(1)EIEDLEK 95.236 0.0023958 29039000.0 258220.0 224510.0 208410.0 256660.0 240420.0 233530.0 245840.0 232180.0 249730.0 250400.0 True False 243896.02185119173 213724.2026036199 221844.4420677903 281052.8892323574 259339.68619732253 232072.452646445 270691.9063671879 231374.62177121936 204385.3271809964 248181.6508082519 0.9827318863296172 0.8611603714762368 0.8938793071337493 1.1324483027534626 1.0449591472727024 0.9350910991632775 1.090700724592761 0.9322793245097002 0.8235311777296015 1.0 17.921036928879605 NFSCGS(ph)VEFDEADLESLR ddPTM_KYSE-520_SHP099_60min_R1 7 NFSCGSVEFDEADLESLR 18 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 NFS(0.29)CGS(0.71)VEFDEADLESLR;NFS(0.025)CGS(0.975)VEFDEADLESLR;NFS(0.144)CGS(0.856)VEFDEADLESLR;NFS(0.011)CGS(0.989)VEFDEADLESLR;NFS(0.001)CGS(0.999)VEFDEADLESLR;NFS(0.001)CGS(0.999)VEFDEADLESLR;NFSCGS(1)VEFDEADLESLR 247.35 7.6849e-24 1323856000.0 1479750.0 1594080.0 1282150.0 1192223.0 1326070.0 1349480.0 1291342.0 1395288.0 1827540.0 1470330.0 True False 1397665.3176915073 1517498.0040371376 1364799.4405125326 1305531.5154650854 1430424.1646937996 1341057.394755811 1421883.4516434157 1390448.0715906662 1495704.8045343282 1457304.0200994287 0.9590760050165426 1.0413050284000465 0.9365234856206704 0.8958539175483863 0.9815550804534285 0.920231726708826 0.9756944549884682 0.9541235407391513 1.0263505650881821 1.0 20.474870450526026 -7.755580311370399 24.898441945293253 1.013175290892096 0.9581417751838583 0.2588843604192228 0.037310725777435605 172.9650925869467 735049.7342346867 0.027622027375945504 0.009798111635830956 1.755576216417333e-08 7.755580311370399 -0.05503351570823756 NFSES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 NFSESPK 7 0 F8VX61;F8W1Y6;F8VV63;Q96LP6-3;Q96LP6 F8VX61 C12orf42 Uncharacterized protein C12orf42 1 NFS(0.079)ES(0.921)PK 65.465 0.047827 8674600000.0 5309100.0 4503400.0 4767700.0 4501700.0 4786100.0 4829300.0 4718600.0 4829300.0 5646600.0 4688700.0 True False 5014593.639571536 4287049.904258789 5075033.570589718 4929540.214514542 5162738.840816085 4799158.5473621255 5195602.137098157 4812548.285467097 4621319.7792023895 4647161.765753399 1.079065866939661 0.9225092906925678 1.092071639939341 1.0607636366011814 1.1109445078633067 1.0327074436549306 1.1180161997773377 1.0355887158765358 0.9944391893689933 1.0 22.14791843465662 -3.9165697286076475 22.402377049669077 1.045670271455589 3.5506047158771783 0.03332612174844585 0.05658997579555805 6127.000256836281 1977964.3877522012 0.013618952402849601 157992.98631348994 0.00012117981116338115 3.9165697286076475 2.5049344444215893 NFSS(ph)EIEDLEK ddPTM_KYSE-520_SHP099_60min_R1 4 NFSSEIEDLEK 11 0 Q7Z3K6-3;Q7Z3K6;Q7Z3K6-2;A8MQD4;Q7Z3K6-5 Q7Z3K6-3 MIER3 Mesoderm induction early response protein 3 1 NFS(0.023)S(0.977)EIEDLEK;NFS(0.002)S(0.998)EIEDLEK;NFS(0.027)S(0.973)EIEDLEK;NFS(0.201)S(0.799)EIEDLEK 254.1 5.8754e-11 466230000.0 1672440.0 1550830.0 1412050.0 1454120.0 1546760.0 1569720.0 1359240.0 1622340.0 1848620.0 1639550.0 True False 1579666.4192735157 1476325.7989567125 1503073.002359883 1592319.1276028813 1668481.2121394651 1559922.7952219318 1496645.244104037 1616712.481197004 1512957.2079178845 1625024.8625506002 0.9720875388910106 0.9084942839825274 0.9249538496295345 0.9798737018113158 1.026741959824945 0.9599378022890765 0.920998366606489 0.9948847666610163 0.9310363446028653 1.0 20.632030360575456 -5.2617050698479275 24.993390169756555 0.9726242387905564 0.9325101291775358 0.2165345511574882 0.0331394101146745 36.56526783241902 3439841.5883973115 0.009358468550791584 0.014909164592672764 5.473875685682409e-06 5.2617050698479275 -0.04011410961302053 NFTKPQDGDVIAPLIT(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 6 NFTKPQDGDVIAPLITPQK 19 1 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 NFTKPQDGDVIAPLIT(1)PQK;NFTKPQDGDVIAPLIT(1)PQK;NFTKPQDGDVIAPLIT(1)PQK;NFTKPQDGDVIAPLIT(1)PQK;NFTKPQDGDVIAPLIT(1)PQK;NFTKPQDGDVIAPLIT(1)PQK 172.77 5.7093e-10 3343460000.0 5641960.0 5612070.0 3978980.0 3842560.0 4105940.0 5554720.0 4400720.0 5998440.0 5683800.0 6240060.0 True False 5328989.23183158 5342457.733311194 4235471.417393099 4207755.74709221 4429054.118397116 5520050.932061234 4845587.724488326 5977632.8116864255 4651765.196938073 6184777.923093212 0.8616298431563371 0.8638075287009261 0.6848219079262913 0.6803406362225165 0.7161217708172777 0.8925220922565436 0.7834699620168234 0.9665072676848538 0.7521313222207939 1.0 22.56029036258497 -6.267870649275401 24.878075806242272 0.8708668260818454 0.758285284681678 0.29153052625870224 0.09115525043480688 707.8491340312063 2738162.7851240705 0.03231447520848232 0.029183998196239683 5.396713348577262e-07 6.267870649275401 -0.1125815414001674 NFTKPQDGDVIAPLIT(ph)PQKK ddPTM_KYSE-520_SHP099_60min_R1 6 NFTKPQDGDVIAPLITPQKK 20 2 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 NFTKPQDGDVIAPLIT(1)PQKK;NFTKPQDGDVIAPLIT(1)PQKK;NFTKPQDGDVIAPLIT(1)PQKK;NFTKPQDGDVIAPLIT(1)PQKK;NFTKPQDGDVIAPLIT(1)PQKK;NFTKPQDGDVIAPLIT(1)PQKK 207.55 4.6278e-15 47207240000.0 14796610.0 14779300.0 11692420.0 10077210.0 10389730.0 13527480.0 10759920.0 13385910.0 15468800.0 13975950.0 True False 13975812.546989247 14069280.243818428 12446132.101733467 11034945.00857633 11207342.641522773 13443049.979556065 11847637.720299501 13339477.40250488 12660055.856714841 13852133.956124574 1.0089284864885377 1.015676017022478 0.8984992594755078 0.7966241911555689 0.8090697561127442 0.9704678009998858 0.8552933257666913 0.96299078862192 0.913942638499921 1.0 23.723604908411595 -9.845223359658554 14.008934202932267 0.9999984106151759 0.9118558220889934 0.10828500394855722 0.07312814547805514 0.0 0.0 0.07692004689908817 0.0186558516524944 1.4281592606919528e-10 9.845223359658554 -0.08814258852618251 NFTTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 NFTTSPK 7 0 Q13107 Q13107 USP4 Ubiquitin carboxyl-terminal hydrolase 4 1 NFT(0.029)T(0.078)S(0.893)PK;NFT(0.061)T(0.283)S(0.655)PK 77.533 0.018418 1398750000.0 5183000.0 4749900.0 4311600.0 4183200.0 4664200.0 4723300.0 4168700.0 4644100.0 5620900.0 4562600.0 True False 4895488.657945653 4521707.674254751 4589532.634803917 4580770.070275055 5031246.004332216 4693820.132680824 4590112.878591341 4627990.70104109 4600286.251358108 4522178.913649082 1.0825508568822493 0.99989579373056 1.0148940858911053 1.0129563995022688 1.112571196408581 1.0379554242123603 1.0150223965569378 1.0233984080268566 1.0172720582711308 1.0 22.108586640743155 -6.728589896773474 6.036816716825897 1.0158102520829868 1.0421011908002547 0.1679959210928329 0.03208156020606113 0.4071590306386792 41.67454888855375 0.013279791032186895 0.009954589719579136 1.8681429410380214e-07 6.728589896773474 0.026290938717267842 NFVFHTLS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 5 NFVFHTLSPVK 11 0 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 1 NFVFHT(0.207)LS(0.793)PVK;NFVFHTLS(1)PVK;NFVFHTLS(1)PVK;NFVFHTLS(1)PVK;NFVFHTLS(1)PVK 242.4 2.7287e-14 8295033000.0 9244090.0 8052940.0 7368330.0 8099340.0 8325990.0 8266010.0 7694100.0 8047070.0 8423340.0 8427530.0 True False 8731301.90006345 7666064.6746906275 7843304.341544846 8869098.838444645 8981198.04459714 8214418.765469286 8471894.715179704 8019156.592370255 6893873.791121494 8352868.640719129 1.0453057836321655 0.9177762759633951 0.9389952935821085 1.0618027434561776 1.075223187494532 0.9834248709988185 1.0142497242061654 0.9600482106563879 0.8253300857043019 1.0 22.99384031936587 -7.527199113746198 24.955820674121295 0.9060063847038073 1.0022090736845886 0.26690175778558245 0.06140517934078762 162.97933457705898 941377.4161315559 0.04158996756370633 0.015858912015451167 2.9703039054359882e-08 7.527199113746198 0.09620268898078121 NFVFHTLS(ph)PVKAEAAK ddPTM_KYSE-520_SHP099_60min_R1 5 NFVFHTLSPVKAEAAK 16 1 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 1 NFVFHT(0.014)LS(0.986)PVKAEAAK;NFVFHT(0.022)LS(0.978)PVKAEAAK;NFVFHT(0.021)LS(0.979)PVKAEAAK;NFVFHT(0.004)LS(0.996)PVKAEAAK;NFVFHTLS(1)PVKAEAAK 206.28 1.9519e-13 8619970000.0 7676360.0 7755310.0 7229350.0 5596730.0 6610470.0 6749480.0 5594050.0 5790570.0 8206590.0 6678390.0 True False 7250537.008355718 7382733.266642374 7695365.46836897 6128641.536481769 7130676.380570727 6707353.99172751 6159551.166666801 5770483.864199203 6716480.127298652 6619224.6603088025 1.0953755734916335 1.115347135883125 1.1625780757243498 0.9258851075460933 1.077267617660535 1.01331414719116 0.9305547828889439 0.87177640287707 1.0146928789972982 1.0 22.65823080686467 -5.58397543573936 0.8250527214512015 0.951461436426509 1.13120413081294 0.46568772916852463 0.06442350134815415 0.6098752508216687 0.8574878652626523 0.03291056480314137 0.06995207736676629 2.606300961601505e-06 5.58397543573936 0.17974269438643087 NFYES(ph)DDDQKEK ddPTM_KYSE-520_SHP099_60min_R1 14 NFYESDDDQKEK 12 1 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK;NFYES(1)DDDQKEK 239.58 1.0678e-17 41763870000.0 15400390.0 12762810.0 11494800.0 12908580.0 13428770.0 13402510.0 14024730.0 14199670.0 14965220.0 12879290.0 True False 14546099.66678365 12149665.450231615 12235773.200330267 14135407.562093917 14485537.799750494 13318859.963681344 15442486.576574566 14150414.658997893 12247913.290496083 12765189.510536004 1.1395130213129805 0.9517810479980455 0.9585265608654872 1.1073402044228937 1.1347687230020804 1.0433734612939634 1.209734220070043 1.1085158310668688 0.9594775918044165 1.0 23.60571162020028 -5.278071200550396 24.437687291969308 1.0910842675259544 1.0101242901844965 0.10207393143539734 0.08200911357799447 1056.9842913953785 1553059.985032891 0.02299660794018173 0.03423113637673706 5.2714343163641255e-06 5.278071200550396 -0.08095997734145799 NFYQEHPDLAR ddPTM_KYSE-520_SHP099_60min_R1 4 NFYQEHPDLAR 11 0 P17844-2;P17844;J3KTA4;J3QR02;J3KRX8;J3QRQ7;X6RLV5;J3KTQ4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ;;; 208.95 2.5130000000000003e-09 6281000000.0 4382940.0 3930270.0 2680840.0 2420000.0 4294930.0 3840680.0 3061130.0 3058690.0 3027420.0 3271660.0 False True 4139809.5810257248 3741453.9297444583 2853651.2358956565 2649996.0724004684 4632916.556191107 3816708.891492087 3370578.8941498087 3048080.118293614 2477716.843047655 3242675.6377129657 1.2766647187522897 1.1538168931331279 0.8800298132527109 0.8172251462898369 1.428732649762857 1.17702456795339 1.0394437405176462 0.9399892122554082 0.7640964190902455 1.0 21.628753288687797 -7.2331186236244 2.8470552443695833 0.8784435065927297 1.1116213325125648 0.24076706914705837 0.1745301037401819 0.4366251336466198 7.009566845790906 0.11281493938905317 0.052826312392789454 5.8463037581484936e-08 7.2331186236244 0.23317782591983505 NFYVEHPEVAR ddPTM_KYSE-520_SHP099_60min_R1 2 NFYVEHPEVAR 11 0 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 ; 98.902 0.0030048 601080000.0 548430.0 492410.0 382270.0 422920.0 542110.0 509880.0 449920.0 478680.0 544760.0 482820.0 False True 518007.49463189975 468753.8844775215 406911.73585362575 463114.18964446575 584770.972816032 506697.64978961734 495402.3043960503 477019.5708047516 445845.31628206227 478542.5904282756 1.082468948413358 0.9795447549569338 0.8503145675904349 0.9677596078334385 1.2219831306816107 1.0588350126498545 1.0352313760676681 0.9968173791549861 0.9316732203147255 1.0 18.868287805136138 -4.245712255082774 22.283334038719712 1.0080443220092379 1.0824692053351879 0.06088439357680542 0.09078860409302679 2365.5727964719813 3351456.8304635836 0.024828939415123995 0.5122321927670731 5.6792076074721705e-05 4.245712255082774 0.07442488332594999 NGAAGPHS(ph)PDPLLDEQAFGDLTDLPVVPK ddPTM_KYSE-520_SHP099_60min_R1 11 NGAAGPHSPDPLLDEQAFGDLTDLPVVPK 29 0 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 NGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;NGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;NGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;NGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;NGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;NGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;NGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;NGAAGPHS(0.994)PDPLLDEQAFGDLT(0.006)DLPVVPK;NGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;NGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;NGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK 278.42 5.0795999999999994e-42 5314033000.0 544096.8999999999 744707.0 688236.7 786991.0 831430.0 1725860.0 1641299.0 2374395.0 2583604.0 2237652.0 True False 513914.76032671967 708930.1578920046 732601.5388996542 861786.3880225286 896858.810810414 1715088.2675647384 1807217.5204546005 2366158.7779329577 2114486.6409567567 2217828.144146912 0.23171982990791973 0.31965062746766376 0.33032385346586424 0.38857221209717085 0.4043860716518191 0.7733188308981658 0.8148591337990019 1.0668810314169321 0.9534041880283265 1.0 21.08071614709034 -6.414719997318422 1.1437906279059735 1.0130140497594053 0.29406625481617177 0.9666130209804195 0.05605036440476037 0.07393647732459331 0.1989820910240967 0.030043500889129875 0.023524616725884673 3.8483981985533877e-07 6.414719997318422 -0.7189477949432336 down NGDECAYHHPIS(ph)PCK ddPTM_KYSE-520_SHP099_60min_R1 9 NGDECAYHHPISPCK 15 0 H0YJA2;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-11;G3V5I6;Q6PJT7-6;H0YJ51;Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4;G3V411;Q6PJT7-8 H0YJA2;Q6PJT7-5 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 NGDECAYHHPIS(1)PCK;NGDECAYHHPIS(1)PCK;NGDECAYHHPIS(1)PCK;NGDECAYHHPIS(1)PCK;NGDECAYHHPIS(1)PCK;NGDECAYHHPIS(1)PCK;NGDECAYHHPIS(1)PCK;NGDECAYHHPIS(1)PCK;NGDECAYHHPIS(1)PCK 242.1 8.444499999999999e-19 11229620000.0 11850160.0 10234400.0 9440640.0 9402670.0 10123900.0 10679230.0 9693660.0 10656160.0 12215560.0 9928930.0 True False 11192808.002091706 9742724.061852409 10049198.759958064 10296296.92978418 10920593.332888564 10612576.964310773 10673589.753804734 10619196.268126452 9997522.233208217 9840967.404790644 1.1373686693284826 0.9900169019063706 1.021159642807683 1.046268776865563 1.1097072964160364 1.0784078970878925 1.0846077742934872 1.0790805244367503 1.0159084795201498 1.0 23.230368714308597 -4.225397191869115 23.211447082375436 1.0529594974071033 1.1373691650535893 0.32239478266725496 0.038401965650815044 10117.606432424673 6515514.8654765645 0.010084453256963553 1.941161672952889 5.951176189882668e-05 4.225397191869115 0.08440966764648605 NGDLDEVKDYVAK ddPTM_KYSE-520_SHP099_60min_R1 2 NGDLDEVKDYVAK 13 1 C9JL85;P58546 C9JL85 MTPN Myotrophin 0 ; 124.09 8.4504e-05 514680000.0 694020.0 764940.0 508680.0 403530.0 707220.0 741660.0 455710.0 528450.0 721990.0 561200.0 False True 655521.3271054293 728191.134201651 541470.3267167768 441881.36987428117 762874.1904686396 737031.0248351913 501777.6141010059 526616.9302911572 590894.8158867873 556228.2046069934 1.1785114844519473 1.3091589534122225 0.9734679439697888 0.7944246016551701 1.3715129584405978 1.3250515143437311 0.9021074622699871 0.9467641624955747 1.0623244398480078 1.0 19.085317375566888 -6.784762803941615 24.9858644822169 0.973362685039294 1.1502249389593837 0.21924738563034796 0.16668486306668007 426.19214020917025 456565.6647377459 0.07600256737179886 0.051276805642297564 1.6414860491844724e-07 6.784762803941615 0.1768622539200897 NGFVVLK ddPTM_KYSE-520_SHP099_60min_R1 2 NGFVVLK 7 0 I3L397;I3L504;P63241;P63241-2;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like 0 ; 122.78 0.018137 1185590000.0 1013310.0 1237870.0 811330.0 766860.0 1190610.0 1344660.0 918780.0 1002120.0 1104040.0 1138390.0 False True 957099.6743165948 1178400.8671192492 863629.6299738984 839742.1438351341 1284304.233355769 1336267.4781636978 1011659.2488286895 998643.8796165665 903574.1665835386 1128304.7502540178 0.8482634448726027 1.0443994557799683 0.7654223114628096 0.7442511818248404 1.1382600605613251 1.1843143245323224 0.8966187978920875 0.8850834664940829 0.8008245701173508 1.0 20.105725355411476 -3.9722734904947403 15.61112860155071 0.9377692172887983 0.6057791600431424 0.03511028242772318 0.14373566507341815 3212123.3919820962 50291502.96808264 0.038602203893684336 27219542.876719568 0.00010659246596201897 3.9722734904947403 -0.3319900572456559 NGHDGDTHQEDDGEKS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 6 NGHDGDTHQEDDGEKSD 17 1 K7EQH5;Q08117;Q08117-2 K7EQH5 AES Amino-terminal enhancer of split 1 NGHDGDTHQEDDGEKS(1)D;NGHDGDTHQEDDGEKS(1)D;NGHDGDTHQEDDGEKS(1)D;NGHDGDTHQEDDGEKS(1)D;NGHDGDTHQEDDGEKS(1)D;NGHDGDTHQEDDGEKS(1)D 292.36 7.964699999999999e-38 1262240000.0 1912590.0 1774660.0 1653320.0 1910200.0 1826040.0 2031000.0 1950480.0 2062330.0 1992420.0 1784720.0 True False 1806494.8200463585 1689402.6697810327 1759895.6526055315 2091744.8336774274 1969738.9592536301 2018323.7756388048 2147653.553250374 2055176.2585814428 1630646.7528208867 1768908.7692911476 1.0212481567210911 0.9550535895969495 0.9949047023554369 1.1825057741760472 1.1135333791368793 1.140999361118892 1.214112107155758 1.1618328170790915 0.9218376781942992 1.0 20.754428212895082 -5.190304437611987 8.094255869563792 1.118038226977066 0.9860486269069598 0.2718215859088229 0.08398830219645773 0.3886524986360333 40.556004884163585 0.022655137610930322 0.039372778576678646 6.45201788209833e-06 5.190304437611987 -0.13198960007010607 NGIDILVGT(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 1 NGIDILVGTPGR 12 0 Q9NR30;Q9NR30-2;Q9BQ39;A0A087WVC1 Q9NR30;Q9BQ39 DDX21;DDX50 Nucleolar RNA helicase 2;ATP-dependent RNA helicase DDX50 1 NGIDILVGT(1)PGR 119.0 0.00063111 102020000.0 123940.0 147380.0 114510.0 97714.0 107550.0 120100.0 111910.0 115140.0 143250.0 123140.0 True False 117064.80113173526 140299.64357811 121891.49782247817 107000.70918121464 116013.57312420777 119350.41135116712 123222.9549363488 114740.60621387814 117239.4110386326 122049.07540147043 0.9591617203707623 1.149534669694185 0.998708899854637 0.876702333297033 0.950548562064814 0.9778886973012595 1.0096180944510804 0.9401186025903787 0.9605923736249797 1.0 16.897101840274715 -4.993223685042275 24.996427932941735 0.9576919652115167 1.059291617661255 0.3223863664729576 0.05476457759645194 170.9415641359841 630554.4379684041 0.013734721808058497 0.02848466006017194 1.015725404847429e-05 4.993223685042275 0.10159965244973834 NGIS(ph)FTIWDR ddPTM_KYSE-520_SHP099_60min_R1 2 NGISFTIWDR 10 0 A0AVT1;A0AVT1-2 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 1 NGIS(0.933)FT(0.067)IWDR;NGIS(0.996)FT(0.004)IWDR 126.32 0.00042224 221730000.0 290200.0 290120.0 273330.0 267510.0 238030.0 253980.0 254120.0 241140.0 283470.0 272140.0 True False 274102.02750064206 276182.19972100167 290949.2891434625 292934.0699701861 256761.60679456234 252394.81661090278 279808.92957220046 240303.541622499 231998.99369718085 269729.05132171605 1.0162124775121468 1.0239245582471155 1.078672422261391 1.0860308466394766 0.9519241829398386 0.9357346395359614 1.0373703840987516 0.890907154587067 0.8601186730177866 1.0 18.041151390673292 -5.79961110984931 9.861421442658877 0.9444782367428238 1.051187742325562 0.5074965087328185 0.050758674948507214 0.34167530777580896 85.12233287354742 0.016562096052957026 0.018874970252561133 1.5863130248936223e-06 5.79961110984931 0.10670950558273817 NGIS(ph)PPNK ddPTM_KYSE-520_SHP099_60min_R1 1 NGISPPNK 8 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 NGIS(1)PPNK 60.898999999999994 0.033835000000000004 312290000.0 449350.0 410600.0 387860.0 322360.0 397120.0 452980.0 368460.0 417640.0 501550.0 427870.0 True False 424423.6597429827 390874.15967683477 412862.0761979415 352996.9974789321 428371.0846962844 450152.7837956001 405707.53262306406 416191.3043179083 410481.16304660466 424079.4046778225 1.0008117702990593 0.9217004064929442 0.9735489902217654 0.8323842034892205 1.0101199916127084 1.061482304564132 0.9566782261715451 0.9813994731342663 0.9679346804366777 1.0 18.693974894907928 NGIS(ph)PTNPTK ddPTM_KYSE-520_SHP099_60min_R1 2 NGISPTNPTK 10 0 Q9UJF2-2;Q9UJF2;A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8 Q9UJF2-2;A0A3B3ITG3 RASAL2;DAB2IP Ras GTPase-activating protein nGAP;Disabled homolog 2-interacting protein 1 NGIS(0.805)PT(0.195)NPTK;NGIS(0.92)PT(0.08)NPTK 144.51 0.00010176 0.0 1010860.0 1048780.0 783710.0 709370.0 832340.0 995680.0 790300.0 1007220.0 1138010.0 1014490.0 True False 954785.5807005486 998395.0345491255 834229.2005803353 776788.3115201319 897840.4226332216 989465.591791257 870191.236584723 1003726.1889069149 931376.0708975506 1005502.4078612776 0.949560710382977 0.9929315203458641 0.8296640505861705 0.7725374951337761 0.8929271731362086 0.9840509421512663 0.8654292916469848 0.9982335010433832 0.9262793043714385 1.0 19.939485105771382 -6.138199711587396 6.993933332028715 0.948872011575375 0.8829976876027221 0.1968291339756557 0.06733928382986312 0.4966389786476648 26.290645320326924 0.02405450182390693 0.024091082593085483 7.274452098037322e-07 6.138199711587396 -0.06587432397265292 NGLHRPVS(ph)TDFAQYNSYGDVSGGVR ddPTM_KYSE-520_SHP099_60min_R1 2 NGLHRPVSTDFAQYNSYGDVSGGVR 25 1 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;O14639-3;O14639-5 F8W8M4;J3QSX6 ABLIM1 Actin-binding LIM protein 1 1 NGLHRPVS(0.498)T(0.498)DFAQY(0.001)NS(0.001)Y(0.001)GDVSGGVR;NGLHRPVS(0.712)T(0.288)DFAQYNSYGDVSGGVR 221.77 1.3943e-21 1118700000.0 1172210.0 1149250.0 952550.0 1093410.0 998600.0 1052070.0 1013530.0 1117670.0 1378880.0 1013370.0 True False 1107185.1745572973 1094038.3049405802 1013952.8971338863 1197327.357654295 1077184.138743225 1045503.640884449 1115987.5034995761 1113793.0636361388 1128510.150736122 1004392.3301899291 1.1023433187188219 1.0892539419667802 1.009518757418378 1.1920912990523156 1.0724734810943162 1.0409315259175125 1.1111071540028035 1.1089223106925978 1.1235750381752938 1.0 19.93789148628079 -11.33315647938765 2.3816495739721204 0.4195376193133851 1.0933808513316938 0.2714395937819164 0.04639984765817658 20849365.3271407 15390233.771404881 59524160.84531994 0.011676360127053656 4.64347937216883e-12 11.33315647938765 0.6738432320183088 NGLHRPVST(ph)DFAQYNSYGDVSGGVR ddPTM_KYSE-520_SHP099_60min_R1 1 NGLHRPVSTDFAQYNSYGDVSGGVR 25 1 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;O14639-3;O14639-5 F8W8M4;J3QSX6 ABLIM1 Actin-binding LIM protein 1 1 NGLHRPVS(0.382)T(0.618)DFAQYNSYGDVSGGVR 189.98 9.716299999999999e-15 888370000.0 435090.0 414660.0 301130.0 379960.0 364540.0 338390.0 332680.0 354450.0 465090.0 365330.0 True False 410954.69036958826 394739.11118265113 320541.3216250357 416071.2841608608 393227.2240511267 336277.9824906029 366310.54104391445 353220.4956792522 380641.3799647998 362093.46042243904 1.1349409345591188 1.0901580788620866 0.8852447134810825 1.1490715233449622 1.0859826730711049 0.9287049318656063 1.0116463871414731 0.9754953742251099 1.051224121862686 1.0 18.46600259573775 -6.2371804099321855 24.771039083419897 0.9930221265125553 1.0644815636089253 0.20953466186280612 0.07320815073064846 1264.4286471930643 1291120.182333509 0.024608829396846832 0.02459679594409533 5.791880463913581e-07 6.2371804099321855 0.07145943709637004 NGLPGSRPGS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 NGLPGSRPGSPER 13 1 H0YEP0;E9PRM3;E9PRL6;Q92993-2;Q92993-4;Q92993;Q92993-3 H0YEP0 KAT5 Histone acetyltransferase KAT5 1 NGLPGS(0.055)RPGS(0.945)PER 83.633 0.007182600000000001 0.0 423720.0 379550.0 366600.0 310650.0 346300.0 390910.0 333390.0 395690.0 433700.0 360640.0 True False 400215.4069351216 361315.84828383493 390231.6225807395 340174.08259967156 373551.83982253016 388470.18568929774 367092.3147728467 394317.44374474 354951.01268729457 357445.0101736747 1.1196558786501614 1.0108291849095319 1.0917249128506075 0.951682280959492 1.0450610001270673 1.0867970586595925 1.0269896188912655 1.1031555414723786 0.9930227100242123 1.0 18.44736178723185 -7.48662003247575 0.0052026075359980625 8.432456159584176e-08 2.0741642348291864 0.09421496290259634 0.05015178246974464 12098.98252452117 63.79986844512896 12723.929493164202 12706.136557877042 3.261219027384999e-08 7.48662003247575 2.074164150504625 NGLQSCPIKEDS(ph)FLQR ddPTM_KYSE-520_SHP099_60min_R1 6 NGLQSCPIKEDSFLQR 16 1 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 NGLQSCPIKEDS(1)FLQR;NGLQSCPIKEDS(1)FLQR;NGLQSCPIKEDS(1)FLQR;NGLQSCPIKEDS(1)FLQR;NGLQSCPIKEDS(1)FLQR;NGLQSCPIKEDS(1)FLQR 294.52 1.0404999999999998e-37 36132020000.0 6190160.0 8271320.0 6676530.0 10505320.0 9062400.0 10081860.0 9833500.0 13281100.0 14438900.0 10517270.0 True False 5846779.485021964 7873953.371695573 7106909.8066257 11503742.45426036 9775559.321997404 10018935.372063918 10827566.145711616 13235030.963932058 11817159.735048587 10424095.170112252 0.56089083892727 0.7553608484189216 0.6817771413870513 1.103572278123827 0.9377849264102733 0.9611323773011974 1.0387056112799302 1.2696575336226075 1.133638895482315 1.0 23.313418824836344 -4.674063379481981 0.5362459122244438 1.1274836166259599 0.34157918447591096 0.7409967810930229 0.1056594377268051 1.4289050630259668 0.42872179160576684 0.0673548075361322 0.6666748925541838 2.1180520112768684e-05 4.674063379481981 -0.7859044321500489 NGLS(ph)PPPCK ddPTM_KYSE-520_SHP099_60min_R1 6 NGLSPPPCK 9 0 H0YBR2;H0YBB3;Q6NXG1-2;Q6NXG1-4;Q6NXG1 H0YBR2 ESRP1 Epithelial splicing regulatory protein 1 1 NGLS(1)PPPCK;NGLS(1)PPPCK;NGLS(1)PPPCK;NGLS(1)PPPCK;NGLS(1)PPPCK;NGLS(1)PPPCK 146.16 0.00033275 6344110000.0 12778700.0 12349200.0 9335000.0 8242500.0 8569500.0 11591700.0 10237400.0 11732500.0 13555900.0 11440600.0 True False 12069840.037293088 11755925.8954729 9936749.036528105 9025864.72180202 9243870.896214772 11519351.900577221 11272296.299395734 11691802.69588608 11094490.276430018 11339245.184652109 1.064430642493722 1.0367467767065108 0.8763148582392142 0.7959846158030612 0.8152104258867718 1.0158834836880404 0.9940958252364989 1.0310917971604638 0.9784152380307138 1.0 23.43482127233975 -6.3549100204505615 24.99999997512139 1.0052284650623409 0.9152690478092398 0.22329648647885603 0.08026003776791613 100.0918524059429 26764.687382745265 0.03238369128796793 0.02855973564846073 4.416619438558445e-07 6.3549100204505615 -0.08995941725310108 NGMVLKPHFHK ddPTM_KYSE-520_SHP099_60min_R1 3 NGMVLKPHFHK 11 1 P26373;J3QSB4;P26373-2;H3BTH3 P26373 RPL13 60S ribosomal protein L13 0 ;; 121.6 0.00080437 2581240000.0 6192200.0 4723700.0 4719000.0 4351700.0 7406700.0 5295400.0 4813700.0 4677300.0 4898600.0 3249900.0 False True 5848706.3221553285 4496766.36158175 5023194.290666963 4765284.259613689 7989565.15164174 5262349.44437111 5300315.773184717 4661075.537990023 4009137.723656863 3221108.4143839376 1.8157433931865778 1.396030739450225 1.559461416522265 1.4793926954877386 2.4803775979610445 1.6337076457507487 1.6454943737739556 1.4470408748665142 1.244645385344362 1.0 21.61912578833794 -7.703530270581611 1.398463939386327 1.0156224325506449 1.7217867510388773 0.4312965476250502 0.2804891805465624 0.41080772019026385 1.5587580725531978 0.2756177276433129 0.08685275920968913 1.9791090713601446e-08 7.703530270581611 0.7061643184882325 NGQAEAEEATEQTHIS(ph)PNAIFK ddPTM_KYSE-520_SHP099_60min_R1 1 NGQAEAEEATEQTHISPNAIFK 22 0 P48436 P48436 SOX9 Transcription factor SOX-9 1 NGQAEAEEATEQT(0.001)HIS(0.999)PNAIFK 288.64 1.0747999999999999e-44 682510000.0 324270.0 363290.0 273880.0 209390.0 245770.0 313400.0 258930.0 294500.0 374720.0 329780.0 True False 306282.09668378107 345837.003090593 291534.7430234937 229290.36264460097 265110.70075998636 311443.9543501728 285105.17131327686 293478.4482368166 306680.2939224879 326858.40576495766 0.9370482486658981 1.0580636660734457 0.891929771061586 0.7014975249236288 0.8110872967746964 0.9528405843542254 0.8722589545954484 0.8978763986502938 0.9382665047415676 1.0 18.318306273644783 -9.355464312200066 14.673353185106203 0.9999965735707788 0.8931812085389002 0.11024579797586564 0.0886825031273453 0.0 0.0 0.09466655183660166 0.022960011319724607 4.4109860855576857e-10 9.355464312200066 -0.1068153650318786 NGS(ph)EEDDDEKPGKR ddPTM_KYSE-520_SHP099_60min_R1 1 NGSEEDDDEKPGKR 14 2 Q6ZU65;Q6ZU65-2;H7C4P8 Q6ZU65 UBN2 Ubinuclein-2 1 NGS(1)EEDDDEKPGKR 79.676 0.007596800000000001 395370000.0 339230.0 305040.0 273200.0 304210.0 314550.0 307510.0 275400.0 331010.0 355220.0 278170.0 True False 320412.2356617606 290385.42052562546 290810.90913545503 333122.0269359281 339303.2954553186 305590.7160249575 303240.119644987 329861.8035683145 290721.00236749084 275705.6302129854 1.1621534004011413 1.0532444342950116 1.0547877056801511 1.2082525361509229 1.230672348595868 1.1083949057873268 1.0998691590401362 1.1964275205895976 1.0544616087198 1.0 18.07276920350931 -10.77062638648516 4.668128015003941 0.9888631158072727 1.1310717490564388 0.27298975841318196 0.06351999676616 0.008183816914802555 0.00040212054559556434 0.06836494060299599 0.015499149080957486 1.695796027283978e-11 10.77062638648516 0.1422086332491661 NGS(ph)IPTYMR ddPTM_KYSE-520_SHP099_60min_R1 1 NGSIPTYMR 9 0 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4M5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 NGS(0.998)IPT(0.002)YMR 67.385 0.046820999999999995 0.0 210480.0 197240.0 176440.0 159290.0 168500.0 186650.0 211150.0 184920.0 227500.0 193260.0 True False 198804.2548185224 187764.29433672407 187813.60471398148 174428.87370771525 181759.99136614593 185485.0481156979 232495.1026254135 184278.55568065267 186191.73480829966 191547.86675400464 1.037882896779199 0.980247378989923 0.9805048100858315 0.9106281195588857 0.9489011516874328 0.968348284211941 1.2137702526543683 0.9620496370095962 0.9720376319691224 1.0 17.547345433163596 NGS(ph)PEIK ddPTM_KYSE-520_SHP099_60min_R1 3 NGSPEIK 7 0 O96028-5;O96028-3;O96028;O96028-6;D6RIS1;D6R9V2;O96028-7 O96028-5 WHSC1 Histone-lysine N-methyltransferase NSD2 1 NGS(1)PEIK;NGS(1)PEIK;NGS(1)PEIK 76.85 0.019316999999999997 2058510000.0 4433100.0 3580400.0 3405700.0 4167000.0 4356400.0 4411700.0 5024400.0 3692000.0 4487200.0 4524400.0 True False 4187187.1058342448 3408392.2097100336 3625236.871312669 4563030.427145769 4699223.895474649 4384164.943862972 5532315.385418555 3679193.3137192773 3672437.593106818 4484317.335929939 0.9337401419576217 0.7600693604800864 0.8084255862683908 1.017552970791151 1.047924030224802 0.9776660783427368 1.2337029186341664 0.8204578396449059 0.818951318115234 1.0 22.096456944428507 -5.260076779292961 24.735818476584036 0.9928548497606303 0.8266774538259608 0.26362297546738556 0.11752766323379596 141.4782175799502 2568280.3057553256 0.033979348401420466 0.05495576878204262 5.494437286438918e-06 5.260076779292961 -0.16617739593466951 NGS(ph)PNKQPSSEPEWTPEPR ddPTM_KYSE-520_SHP099_60min_R1 3 NGSPNKQPSSEPEWTPEPR 19 1 Q5JSZ5;A0A494C0D3 Q5JSZ5 PRRC2B Protein PRRC2B 1 NGS(1)PNKQPSSEPEWTPEPR;NGS(1)PNKQPSSEPEWTPEPR;NGS(1)PNKQPSSEPEWTPEPR 195.7 3.7678000000000004e-13 2669100000.0 956410.0 873700.0 780330.0 783200.0 831140.0 813420.0 780350.0 854640.0 1147730.0 817510.0 True False 903356.030743932 831726.1405495635 830631.3203721445 857635.092522334 896545.9894602873 808343.1440571711 859235.3934820814 851675.4533144747 939331.1639188115 810267.4974131564 1.1148861747854482 1.0264834060417276 1.02513222241297 1.0584592066945822 1.1064814920042847 0.9976250394318802 1.0604342346512217 1.0511040564178082 1.1592852569277443 1.0 19.62803874475762 NGS(ph)PPPGAPSSR ddPTM_KYSE-520_SHP099_60min_R1 2 NGSPPPGAPSSR 12 0 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 NGS(1)PPPGAPSSR;NGS(1)PPPGAPSSR 161.04 3.6583999999999996e-06 0.0 700930.0 662610.0 574400.0 497120.0 479360.0 582730.0 502580.0 576210.0 764150.0 572910.0 True False 662048.0156306862 630777.2210021127 611426.7430724943 544366.1353354224 517082.9048146927 579092.9659172822 553385.6911081246 574211.2619984243 625399.6226538995 567834.4631172348 1.1659172851120172 1.1108470196390368 1.0767693452700131 0.9586704765100403 0.9106226169790193 1.0198270861163334 0.9745546053513714 1.011230031453503 1.101376656888083 1.0 19.115110886478153 -4.933096215292737 2.473551937119022 0.9940996061684529 1.1447259042149613 0.5906102463730954 0.04786882366544654 0.20639380937569551 2.518455394826308 0.0141967165865135 0.03682486708580357 1.1665511461416553e-05 4.933096215292737 0.1506262980465084 NGS(ph)PS(ph)KCPR ddPTM_KYSE-520_SHP099_60min_R1 1 NGSPSKCPR 9 1 C9J5P6;P29475-2;P29475;P29475-5 C9J5P6 NOS1 Nitric oxide synthase;Nitric oxide synthase, brain 2 NGS(1)PS(1)KCPR 53.472 0.045376 588710000.0 620180.0 521870.0 510800.0 492170.0 516640.0 504100.0 492690.0 521800.0 582440.0 540860.0 True False 585777.3791018205 496798.58185715985 543726.9853088962 538945.6888236941 557296.6287205083 500953.7249135997 542495.9133910257 519989.9975890356 476683.5781175643 536068.4011827126 1.0927287969397868 0.9267447601109992 1.014286580050767 1.0053673890022867 1.0395998486218558 0.9344959035234303 1.0119900971482971 0.9700068059258786 0.8892215565511243 1.0 19.032057571670258 -6.8032287820352995 1.0835529745774306 0.9508396518756788 1.0079135347739157 0.17296902466737762 0.05147359235472427 0.9693733081176096 2.2367437175543134 0.03583282805893539 0.019595087890226202 1.5731539242272404e-07 6.8032287820352995 0.057073882898236894 NGSLDS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 4 NGSLDSPGK 9 0 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 NGSLDS(1)PGK;NGSLDS(1)PGK;NGSLDS(1)PGK;NGSLDS(1)PGK 186.14 6.0835e-06 1918820000.0 4356110.0 3718620.0 3176050.0 3380800.0 3569350.0 4078560.0 3950520.0 4059480.0 4031360.0 4019470.0 True False 4114467.894610004 3539971.9134375835 3380783.264859671 3702110.215525418 3850237.5381765766 4053104.1941749817 4349877.114959738 4045398.6113697523 3299366.6463155476 3983860.622900339 1.0327840966521014 0.8885782532372846 0.8486198652196787 0.9292770420342165 0.9664588956863451 1.01738102253794 1.0918748236209457 1.015446822641253 0.8281832520319287 1.0 21.925735744298475 -5.869998840898064 3.1529491429776355 0.9973557155955111 0.9160834387748683 0.1369143702422999 0.07575317197442001 0.4470527268076679 8.857873794920799 0.025721861117474633 0.030073522680715753 1.3489664828850966e-06 5.869998840898064 -0.08127227682064275 NGSLDS(ph)PGKQDT(ph)EEDEEEDEKDK ddPTM_KYSE-520_SHP099_60min_R1 1 NGSLDSPGKQDTEEDEEEDEKDK 23 2 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 2 NGS(0.023)LDS(0.977)PGKQDT(1)EEDEEEDEKDK 63.427 0.011381 0.0 368500.0 263420.0 208360.0 308760.0 295120.0 301280.0 249960.0 313950.0 278570.0 273870.0 True False 348058.57041346177 250764.90779851895 221791.21898778743 338104.4575679214 318344.2649968957 299399.59976585844 275228.39617451275 312860.98072648083 227988.71017823322 271443.72486763593 1.2822494628792231 0.9238191375424111 0.8170799273254132 1.2455784628389963 1.1727818174913782 1.1029895788228468 1.0139427474653258 1.1525813716233124 0.8399115149536329 1.0 18.050293607016535 -7.759754217965037 24.999998871529822 0.9199557537015479 1.0803086404689408 0.18900524051409318 0.13906122296498147 77.18011940574117 1145145.811338669 0.10860062640870356 0.0361482767073952 1.738784587755292e-08 7.759754217965037 0.1603528867673929 NGSLDS(ph)PGKQDT(ph)EEDEEEDEKDKGK ddPTM_KYSE-520_SHP099_60min_R1 3 NGSLDSPGKQDTEEDEEEDEKDKGK 25 3 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 2 NGSLDS(1)PGKQDT(1)EEDEEEDEKDKGK;NGS(0.006)LDS(0.994)PGKQDT(1)EEDEEEDEKDKGK;NGS(0.013)LDS(0.987)PGKQDT(1)EEDEEEDEKDKGK 187.89 1.137e-14 11607900000.0 3067290.0 2461500.0 2525890.0 2363060.0 2288320.0 2272240.0 2312814.0 2461700.0 3039390.0 2185600.0 True False 2897141.3092089794 2343245.845213172 2688712.910966897 2587644.511920104 2468397.765240232 2258058.1073153694 2546615.8100094427 2453160.937265099 2487513.392786803 2166237.2843710673 1.337407185312166 1.0817124523334463 1.2411903951452494 1.194534195579311 1.1394863263822421 1.0423872415117077 1.1755941181433465 1.1324525503111427 1.148310672488962 1.0 21.046759850237077 -1.0000000026543328 0.05053272918474431 0.7469862661413292 1.8981613032973612 0.44412550342312707 0.06883338647150049 490.6364907621652 1.8747684952146126 9.984690878113149 43.911178264865136 0.0999999993888173 1.0000000026543328 1.1511750371560319 NGSLDS(ph)PGKQDTEEDEEEDEKDK ddPTM_KYSE-520_SHP099_60min_R1 3 NGSLDSPGKQDTEEDEEEDEKDK 23 2 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 NGSLDS(1)PGKQDTEEDEEEDEKDK;NGS(0.253)LDS(0.612)PGKQDT(0.135)EEDEEEDEKDK;NGSLDS(0.999)PGKQDT(0.001)EEDEEEDEKDK 222.47 3.164e-21 4600200000.0 3306440.0 2800870.0 2480580.0 3109520.0 2867930.0 3047000.0 3226350.0 3532490.0 3320580.0 2937760.0 True False 3123025.181975275 2666312.001008421 2640482.155868328 3405047.845888719 3093619.7747104494 3027982.5427727415 3552500.9441416217 3520236.6166793643 2717646.3770098593 2911733.731942697 1.0725655123319278 0.9157128523663008 0.906841902094739 1.1694228110675782 1.0624665781669531 1.0399242587173256 1.2200638077477666 1.2089830117572862 0.9333430276252137 1.0 21.473447001382215 -5.257801004358775 24.990031040042 1.1014186728209412 0.9601073636591471 0.26027097386862474 0.09568711692353175 391.04978583333946 2685900.173781878 0.02624572079827531 0.04329304433097238 5.523304615544829e-06 5.257801004358775 -0.14131130916179413 NGSLDS(ph)PGKQDTEEDEEEDEKDKGK ddPTM_KYSE-520_SHP099_60min_R1 5 NGSLDSPGKQDTEEDEEEDEKDKGK 25 3 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 NGS(0.468)LDS(0.525)PGKQDT(0.007)EEDEEEDEKDKGK;NGSLDS(1)PGKQDTEEDEEEDEKDKGK;NGSLDS(0.714)PGKQDT(0.286)EEDEEEDEKDKGK;NGS(0.062)LDS(0.938)PGKQDTEEDEEEDEKDKGK;NGSLDS(1)PGKQDTEEDEEEDEKDKGK 242.9 1.3320999999999999e-28 17752500000.0 6543470.0 5850150.0 5341250.0 5431840.0 5609970.0 5982770.0 5495970.0 5956640.0 7015990.0 5435990.0 True False 6180490.675015947 5569100.012745822 5685555.521302164 5948080.440457755 6051442.722637011 5945429.313234154 6051556.283098252 5935977.806130224 5742063.074715078 5387831.357736224 1.1471202910131117 1.0336440847854897 1.0552586270426683 1.1039841534603874 1.1231685479442348 1.1034920951446061 1.1231896251557698 1.1017378629728143 1.0657466229840737 1.0 22.361273263634914 -8.09772757522588 3.0633697431185807 1.0000834710419109 1.0971082464928683 0.48219138843487885 0.031257855708969516 0.3700540928979952 7.653476709993031 0.03157975014111849 0.008421411721061445 7.984954113830315e-09 8.09772757522588 0.09702477545095745 NGSLDSPGKQDT(ph)EEDEEEDEKDK ddPTM_KYSE-520_SHP099_60min_R1 6 NGSLDSPGKQDTEEDEEEDEKDK 23 2 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 NGS(0.004)LDS(0.141)PGKQDT(0.855)EEDEEEDEKDK;NGS(0.002)LDS(0.038)PGKQDT(0.961)EEDEEEDEKDK;NGSLDSPGKQDT(1)EEDEEEDEKDK;NGSLDSPGKQDT(1)EEDEEEDEKDK;NGSLDSPGKQDT(1)EEDEEEDEKDK;NGSLDSPGKQDT(1)EEDEEEDEKDK 238.12 2.3963999999999998e-28 7121190000.0 7553570.0 6446430.0 5854010.0 6522720.0 6352200.0 6633570.0 7137390.0 7169560.0 7622470.0 6918960.0 True False 7134558.414431523 6136733.826511298 6231368.851347174 7142637.347672715 6852082.000926004 6592167.429032155 7858907.035413683 7144690.469747875 6238421.594831735 6857663.397269433 1.040377458198421 0.8948724180534738 0.908672311596449 1.0415555465316002 0.9991861081508241 0.9612847769193523 1.146003613788178 1.041854937440168 0.9097007586163727 1.0 22.709285661843865 -5.266543831466694 24.961536518453745 1.0186286115947691 0.9426638976251305 0.1631366456338399 0.06793785563335333 674.5723313215566 3298763.91289294 0.019348928574516495 0.029683309124420076 5.4132261177196535e-06 5.266543831466694 -0.07596471396963866 NGSLDSPGKQDTEEDEEEDEKDKGK ddPTM_KYSE-520_SHP099_60min_R1 1 NGSLDSPGKQDTEEDEEEDEKDKGK 25 3 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 0 164.83 1.7462000000000001e-10 1666400000.0 950910.0 844630.0 639390.0 375140.0 741700.0 887630.0 649630.0 670600.0 774680.0 704510.0 False True 898161.1267079104 804052.7069845232 680606.1024601713 410793.1928100462 800067.5703042749 882089.9719203688 715300.9401778246 668273.8451192166 634017.640093598 698268.5895004853 1.2862688372541868 1.1514948818759152 0.9747053106699972 0.5883025514636309 1.1457877131156833 1.2632531166143135 1.0243922624237236 0.9570441162150429 0.9079853363404905 1.0 19.4134225512817 -4.570601334939947 3.3603986340713616 0.9850377999936544 1.2681817108536693 0.2649967427873684 0.16436124367084154 0.34902250697730985 7.755068623410662 0.04672730585237309 0.17271310131015563 2.687810616798701e-05 4.570601334939947 0.2831439108600149 NGSTAVAESVAS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 2 NGSTAVAESVASPQK 15 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 NGSTAVAESVAS(1)PQK;NGSTAVAES(0.001)VAS(0.999)PQK 272.13 2.5648000000000005e-25 1016420000.0 925960.0 1060460.0 689100.0 601610.0 706870.0 955900.0 740000.0 976260.0 1021750.0 838790.0 True False 874595.1529445038 1009513.9098170886 733520.4885989833 658786.8335193578 762496.6474598661 949933.8735269 814806.4217040312 972873.581920798 836225.9562214516 831358.9731687458 1.052006631516783 1.2142936353586236 0.882314995414257 0.7924216310655494 0.9171689631899814 1.1426277988029683 0.9800897662755427 1.170220823157373 1.0058542497402239 1.0 19.665112028429363 -6.252314570720693 24.70550410339242 1.0654180328385934 0.9702026607628 0.1204759292866382 0.11851939121479343 1338.986205760461 3625316.0620540623 0.043076787466873066 0.04249782820972321 5.593523013957939e-07 6.252314570720693 -0.09521537207579334 NGSVVSLQS(ph)PGSR ddPTM_KYSE-520_SHP099_60min_R1 1 NGSVVSLQSPGSR 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 NGSVVSLQS(0.999)PGS(0.001)R 126.16 0.00060766 0.0 419630.0 389670.0 349070.0 339390.0 333010.0 415490.0 330240.0 398300.0 447250.0 401840.0 True False 396352.28738833364 370949.66829340573 371571.6107317475 371645.52355867595 359215.99243228673 412896.7727918099 363623.8820318095 396918.39026391885 366040.6742549976 398280.01022678945 0.9951598805138171 0.9313790769518631 0.9329406477622777 0.9331262278190984 0.9019182063085245 1.0366997142455063 0.9129855194709722 0.9965812495533098 0.9190535925882043 1.0 18.603423546731456 NGT(ph)KSPEAATPVGK ddPTM_KYSE-520_SHP099_60min_R1 1 NGTKSPEAATPVGK 14 1 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 NGT(0.535)KS(0.462)PEAAT(0.003)PVGK 74.77199999999999 0.044716000000000006 2167300000.0 533610.0 496140.0 520000.0 513280.0 503670.0 471680.0 440780.0 495040.0 704790.0 539940.0 True False 504009.5895748373 472304.6896786769 553520.0320294172 562061.976876741 543305.9635097136 468736.07015918783 485338.3439982468 493322.82178320433 576817.9023100715 535156.551666964 0.9417984102126626 0.8825542511018332 1.0343142213343977 1.0502758027085142 1.0152280894578698 0.8758858855396942 0.9069090950796772 0.9218289867638706 1.0778489033037832 1.0 19.02960146553001 NGTKS(ph)PEAATPVGK ddPTM_KYSE-520_SHP099_60min_R1 5 NGTKSPEAATPVGK 14 1 A0A2R8YH03;Q5VWN6 A0A2R8YH03 FAM208B Protein FAM208B 1 NGT(0.02)KS(0.978)PEAAT(0.002)PVGK;NGT(0.048)KS(0.948)PEAAT(0.004)PVGK;NGT(0.063)KS(0.936)PEAATPVGK;NGTKS(1)PEAATPVGK;NGT(0.011)KS(0.947)PEAAT(0.042)PVGK 230.82 1.072e-14 2970970000.0 3998760.0 4072750.0 3501840.0 3239510.0 3383590.0 3534360.0 3161630.0 3549540.0 4694480.0 3526280.0 True False 3776940.8114695665 3877088.9766776185 3727574.2095421012 3547392.0564057995 3649859.283006391 3512300.7482357286 3481238.4149352894 3537227.4742088597 3842080.7702104007 3495039.902604326 1.0806574221528007 1.109311791773424 1.0665326615482995 1.0149789860088474 1.0442968849330452 1.0049386691174944 0.9960511215741049 1.0120706981265357 1.099295251921867 1.0 21.736877496158293 -5.068361416900446 3.524636425185699 1.0239511244681514 1.0945643365578241 0.49358528627763165 0.029153551189592404 0.1926115802815763 4.653213168176496 0.008110769436798395 0.015984830310320608 8.543554282127869e-06 5.068361416900446 0.07061321208967275 NGTLILS(ph)PVDIK ddPTM_KYSE-520_SHP099_60min_R1 1 NGTLILSPVDIK 12 0 Q5TBI2;Q8NDD1-6;Q8NDD1;Q8NDD1-5 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 1 NGTLILS(1)PVDIK 101.62 0.0012380000000000002 108790000.0 274160.0 324060.0 189930.0 204010.0 248000.0 240420.0 208960.0 270090.0 291520.0 295910.0 True False 258951.79827558945 308491.67117602355 202173.19169874454 223399.04906215667 267516.1890730218 238919.44960072945 230083.71605307312 269153.12082947977 238587.3166211669 293288.4676144964 0.8829252659738408 1.0518370315927679 0.6893322241516996 0.7617041709113376 0.9121265191533199 0.8146227212546572 0.7844962944656223 0.9177078219906669 0.8134902765245113 1.0 18.161960818486072 -10.232895191054753 5.194971300624492 1.0000157780095422 0.8475456988698391 0.18733532066802183 0.09523615983965585 1.7727182109919085e-05 2.617803307827662e-06 0.09392689264292706 0.02277826111027744 5.84931229452128e-11 10.232895191054753 -0.15247007913970312 NGTLILS(ph)PVDIKK ddPTM_KYSE-520_SHP099_60min_R1 1 NGTLILSPVDIKK 13 1 Q5TBI2;Q8NDD1-6;Q8NDD1;Q8NDD1-5 Q5TBI2 C1orf131 Uncharacterized protein C1orf131 1 NGTLILS(1)PVDIKK 96.67299999999999 0.0018872 0.0 219180.0 232570.0 163420.0 182930.0 198000.0 203900.0 172580.0 173780.0 221270.0 174350.0 True False 207021.64847550212 221396.98810531295 173954.31468124507 200315.61220009005 213581.47353410625 202627.38446713536 190026.07061848868 173177.19774055705 181092.94576277994 172805.39464224724 1.198004546698855 1.2811925725100373 1.0066486352545672 1.159197677912754 1.2359653121725525 1.1725755719989386 1.0996535785928025 1.0021515711305167 1.0479588680532232 1.0 17.39878873072369 -7.000030936615861 2.823392356880134 1.018998687255669 1.174743384414649 0.525253735864424 0.06770492079746827 0.23652231182883443 3.800860093903721 0.036358340791035455 0.02076271054391456 9.999287683465854e-08 7.000030936615861 0.1557446971589802 NGVAAEVS(ph)PAKEENPR ddPTM_KYSE-520_SHP099_60min_R1 5 NGVAAEVSPAKEENPR 16 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 NGVAAEVS(1)PAKEENPR;NGVAAEVS(1)PAKEENPR;NGVAAEVS(1)PAKEENPR;NGVAAEVS(1)PAKEENPR;NGVAAEVS(1)PAKEENPR 281.65 5.277399999999999e-37 8805230000.0 6440990.0 6012560.0 4747650.0 4486500.0 4850730.0 6782440.0 5514040.0 6581890.0 7153950.0 6754750.0 True False 6083695.444904757 5723707.592563441 5053691.115508583 4912895.611084588 5232454.854121695 6740108.276141626 6071452.975044457 6559058.959814681 5854973.016403662 6694908.170115977 0.9087048381127187 0.8549344437780823 0.7548559273847423 0.7338256905470716 0.7815573748237167 1.0067514153857118 0.9068762140973893 0.9797085774965988 0.8745411987185234 1.0 22.674632836460486 -6.252602393784308 24.881676848990537 0.9493885637253893 0.8025139321077538 0.6011035031378701 0.05969397587012799 451.54356391018416 1271380.3085908731 0.020854242018317266 0.0205479835570638 5.589817206884489e-07 6.252602393784308 -0.14687463161763548 NGVAAEVS(ph)PAKEENPRR ddPTM_KYSE-520_SHP099_60min_R1 8 NGVAAEVSPAKEENPRR 17 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR;NGVAAEVS(1)PAKEENPRR 201.27 6.2065e-13 12715800000.0 3477550.0 3094180.0 3279710.0 2620850.0 3008350.0 2786110.0 2534360.0 2582820.0 3470630.0 2613360.0 True False 3284643.3691759417 2945530.9483411317 3491125.354321537 2869934.7960127173 3245090.029829939 2768720.8540349733 2790557.841770039 2573860.8002547193 2840451.0794625417 2590207.6635633144 1.2681003980419474 1.1371794585338397 1.3478167806510317 1.1079940949848732 1.2528300628088296 1.0689184859510765 1.0773490793904552 0.9936889757765187 1.09661133329942 1.0 21.304636336418625 -6.342557114895875 4.6100612490976305 1.045563714491673 1.2185942869652877 0.6169540772378612 0.06919108246532023 0.15205154492175915 5.8576160345510635 0.023409613128272316 0.02062990740457148 4.5440477364107566e-07 6.342557114895875 0.17303057247361475 NGYGFVEFEDS(ph)RDADDAVYELNGK ddPTM_KYSE-520_SHP099_60min_R1 10 NGYGFVEFEDSRDADDAVYELNGK 24 1 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;Q13247-2;A0A590UK01;A0A590UK80 Q13247;A0A590UK01;A0A590UK80 SRSF6 Serine/arginine-rich splicing factor 6 1 NGY(0.001)GFVEFEDS(0.999)RDADDAVYELNGK;NGY(0.005)GFVEFEDS(0.995)RDADDAVYELNGK;NGYGFVEFEDS(1)RDADDAVYELNGK;NGYGFVEFEDS(1)RDADDAVYELNGK;NGYGFVEFEDS(1)RDADDAVYELNGK;NGYGFVEFEDS(1)RDADDAVYELNGK;NGYGFVEFEDS(1)RDADDAVYELNGK;NGYGFVEFEDS(1)RDADDAVYELNGK;NGY(0.002)GFVEFEDS(0.997)RDADDAVYELNGK;NGYGFVEFEDS(1)RDADDAVYELNGK 305.23 6.165099999999999e-50 4756340000.0 3516966.0 3399624.0 3139760.0 3192067.0 3127269.0 2971970.0 3039176.0 3288163.0 4165842.0 3239433.0 True False 3321872.8850820917 3236300.9601003393 3342153.9533936256 3495440.087950062 3373367.2785733854 2953420.8328337055 3346405.5695794164 3276757.1300160103 3409430.10513088 3210734.143860737 1.0346147442427969 1.0079629191001345 1.0409313894095458 1.0886731605086994 1.0506529433536627 0.9198584188232957 1.0422555775843658 1.0205632055464686 1.0618848999535109 1.0 21.614471780880336 NHAGS(ph)PGCEESDAGK ddPTM_KYSE-520_SHP099_60min_R1 2 NHAGSPGCEESDAGK 15 0 P42575 P42575 CASP2 Caspase-2;Caspase-2 subunit p18;Caspase-2 subunit p13;Caspase-2 subunit p12 1 NHAGS(1)PGCEESDAGK;NHAGS(1)PGCEESDAGK 294.53 3.0291e-33 992040000.0 1175560.0 1503560.0 1402650.0 1269970.0 1309970.0 1580560.0 1362510.0 1605280.0 1474980.0 1512080.0 True False 1110349.3433792382 1431326.72071043 1493067.0633193506 1390667.5669695952 1413057.186290268 1570695.1387610387 1500245.8076161626 1599711.6583551667 1207160.8132199806 1498684.147580439 0.7408828238904437 0.9550556219742802 0.9962519892732855 0.9279257201824468 0.9428652385304722 1.0480494781351082 1.0010420207875321 1.0674108089672079 0.8054804710978559 1.0 20.515264932107048 -4.263138397027027 4.046153637706457 0.9769822885268566 0.7205957764826955 0.5020653634568255 0.06906693294996735 0.18208268393579422 6.392814909586012 0.01679845348353263 0.13659656353433117 5.4558397163361635e-05 4.263138397027027 -0.2563865120441612 NHDDWSHDYDNRR ddPTM_KYSE-520_SHP099_60min_R1 3 NHDDWSHDYDNRR 13 1 G3V1T9;J3KPD3;Q9Y580 G3V1T9 RBM7 RNA-binding protein 7 0 ;; 185.95 3.1753e-08 4607470000.0 1411750.0 2362210.0 2091770.0 2453960.0 1449250.0 1880410.0 2138470.0 2148420.0 2051990.0 905850.0 False True 1333437.4132461473 2248725.885850501 2226608.8411503374 2687183.620590023 1563297.72989547 1868673.663687329 2354647.417055971 2140967.632465 1679400.3424583846 897824.8737406367 1.4851865349760294 2.5046375430450722 2.480003513239219 2.9929930648883936 1.7412056355514547 2.0813342538638007 2.622613257801299 2.384616081691987 1.870521068837673 1.0 19.776074540310642 -5.811901803692796 24.999998770658177 2.05947237885984 2.3838094533664624 0.10583075998108904 0.5371486501461653 300.19419906227415 148719.7694003021 0.16624015322072383 0.1884989041891439 1.5420490790865666e-06 5.811901803692796 0.3243370745066225 NHETDGGS(ph)AHGDDDDDGPHFEPVVPLPDKIEVK ddPTM_KYSE-520_SHP099_60min_R1 8 NHETDGGSAHGDDDDDGPHFEPVVPLPDKIEVK 33 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NHETDGGS(1)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.216)DGGS(0.784)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.193)DGGS(0.807)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.046)DGGS(0.954)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.246)DGGS(0.754)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.001)DGGS(0.999)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.001)DGGS(0.999)AHGDDDDDGPHFEPVVPLPDKIEVK;NHET(0.173)DGGS(0.827)AHGDDDDDGPHFEPVVPLPDKIEVK 261.73 1.3162e-41 11598620000.0 2674162.0 4981000.0 4509140.0 6140310.0 3655341.0 4167357.0 3639358.0 4314322.0 4394841.0 3292516.0 True False 2525820.9030502173 4741705.283366568 4799806.379279085 6723883.216248486 3942995.540654716 4141346.97916041 4007259.823351269 4299356.623952323 3596848.659325894 3263346.8697786867 0.7739970661535938 1.4530190851848186 1.4708232286703247 2.060425533833762 1.2082673702786986 1.2690489685643707 1.2279601229222172 1.3174684750088783 1.1021962429540395 1.0 21.63792091277992 -5.915882914177223 24.69965375762689 1.2092566906186222 1.4667066020696746 0.13969767367449093 0.3005740765451561 48.24420137149433 14159.750197147847 0.09562327981399836 0.10842660490806806 1.213716024285216e-06 5.915882914177223 0.25744991145105245 NHIRT(ph)PASTK ddPTM_KYSE-520_SHP099_60min_R1 1 NHIRTPASTK 10 1 Q8IWZ3-6;H0Y4P6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 NHIRT(0.999)PAS(0.001)TK 94.09 0.0055853000000000005 309810000.0 349750.0 405740.0 364740.0 327090.0 388680.0 392030.0 395100.0 324060.0 423400.0 643910.0 True False 330348.6702906606 386247.64137184416 388251.72400463355 358176.535256806 419266.9047133152 389583.1953538555 435040.5638044085 322935.9114961729 346521.23304542457 638205.4583543991 0.5176211923076598 0.605208928121324 0.608349112221217 0.5612244937239452 0.656946598035039 0.6104353860563784 0.6816622423226408 0.5060061885538509 0.5429618761627691 1.0 19.283661421987205 -10.203743390052763 4.2673613628512665 1.0001543474296348 0.5912082647455617 0.8392620261807091 0.054096350706448165 75629768.2687708 98128019.06443526 149674.84033732367 0.01380585216537623 6.255421953660835e-11 10.203743390052763 -0.4089460826840732 NHKPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 NHKPSR 6 1 P84103 P84103 SRSF3 Serine/arginine-rich splicing factor 3 1 NHKPS(1)R 47.869 0.066588 159400000.0 160420.0 191130.0 134120.0 166490.0 167580.0 173840.0 178300.0 209910.0 215480.0 323080.0 True False 151521.18281065827 181947.82790802122 142765.58979958744 182313.15954295621 180767.59260023007 172755.00007732605 196324.30404030927 209181.8712033621 176354.26380875788 320217.7625524362 0.47318169236738206 0.5682002973780287 0.4458390710796667 0.5693411823558729 0.5645145702079193 0.5394922464647386 0.6130962332489623 0.6532488064871423 0.5507322966816357 1.0 18.288693811134085 -13.999999999996332 0.20005655114046547 3.0358998263008696 0.4833884565397729 0.8940768195499885 0.04739912136857951 39.35704508427242 0.3893974842853975 31.95734481211828 0.109088854745818 1.0000000000084463e-14 13.999999999996332 -2.552511369761097 NHLLHVFDEYKR ddPTM_KYSE-520_SHP099_60min_R1 2 NHLLHVFDEYKR 12 1 Q6P452;P09525-2;P09525 Q6P452 ANXA4 Annexin;Annexin A4 0 ; 213.06 1.204e-10 1003010000.0 966990.0 1572470.0 1369940.0 905210.0 1465450.0 1559260.0 1230780.0 1351020.0 1192530.0 895540.0 False True 913349.1370532261 1496926.1808744092 1458248.5243815004 991240.8862386892 1580772.5777300792 1549528.0799618706 1355199.2536552513 1346333.6269504372 975996.6132349065 887606.2123195772 1.029002641460085 1.6864755564998795 1.642900313384092 1.116757490518553 1.7809390648574366 1.7457382096419718 1.5268023531670822 1.5168141099779706 1.0995829002642274 1.0 19.759560239370657 -7.811042281296987 3.9833838982780163 1.0080804622927475 1.5231255115400262 0.37056561293759793 0.23820309502962506 0.22021648657303014 6.722546020486068 0.2199483192682368 0.06007421044059549 1.54510400663102e-08 7.811042281296987 0.5150450492472787 NHLLQFALES(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 4 NHLLQFALESPAK 13 0 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 NHLLQFALES(1)PAK;NHLLQFALES(1)PAK;NHLLQFALES(1)PAK;NHLLQFALES(1)PAK 251.28 2.4833e-16 1281880000.0 1581910.0 2135660.0 1824390.0 1524550.0 1859160.0 2225030.0 1666880.0 2068590.0 2035330.0 2071000.0 True False 1494158.2988405945 2033059.6879089873 1941993.0985272103 1669442.7736273268 2005465.3148266089 2211142.762437031 1835384.4975811027 2061414.5441025347 1665765.3784939607 2052652.551213619 0.7279158364902925 0.9904548564280654 0.9460895354057939 0.8133099645335877 0.9770115812541625 1.077212390927878 0.8941525425215983 1.004268619588705 0.8115184313629146 1.0 20.969058015054863 -4.254075357962703 24.76552367024904 0.9454405756223848 0.7279157187920139 0.3976035146354173 0.08052876606449974 810.9498954586072 2727185.4425822916 0.01975247327736901 0.19774803062199833 5.5708907549495484e-05 4.254075357962703 -0.21752485683037093 NHLLQFALES(ph)PAKS(ph)PASSSSK ddPTM_KYSE-520_SHP099_60min_R1 1 NHLLQFALESPAKSPASSSSK 21 1 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 2 NHLLQFALES(1)PAKS(0.998)PAS(0.002)SSSK 164.35 6.6287e-09 549610000.0 185960.0 188320.0 202650.0 179480.0 264480.0 199640.0 185960.0 227150.0 242050.0 223480.0 True False 175644.42809793065 179272.82452591733 215713.14325146444 196537.7252373705 285293.0713146487 198393.9727073023 204758.65159470495 226362.06966720865 198099.82158395107 221500.14106480908 0.7929765970060424 0.8093576088218545 0.9738736156757055 0.8873029348539566 1.2880040163548896 0.8956832792682236 0.9244177028979602 1.021950002284545 0.8943552840717547 1.0 17.756948092013655 -4.772925982908119 2.2315798702474208 0.9932399185753261 0.7833068915515322 0.3034711525222066 0.11120565316820098 0.39395632738001646 3.7907223419174274 0.030972115110685504 0.10804477361855813 1.6868404902168643e-05 4.772925982908119 -0.2099330270237939 NHLS(ph)PQQGGATPQVPSPCCR ddPTM_KYSE-520_SHP099_60min_R1 6 NHLSPQQGGATPQVPSPCCR 20 0 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 NHLS(1)PQQGGATPQVPSPCCR;NHLS(1)PQQGGATPQVPSPCCR;NHLS(1)PQQGGATPQVPSPCCR;NHLS(1)PQQGGATPQVPSPCCR;NHLS(1)PQQGGATPQVPSPCCR;NHLS(1)PQQGGATPQVPSPCCR 279.46 2.958e-36 16723800000.0 2456340.0 3221910.0 2375070.0 3040740.0 2485930.0 2867740.0 2174450.0 2682230.0 3184810.0 2790160.0 True False 2320081.923607608 3067124.607414498 2528170.8124463647 3329731.015368184 2681558.547993134 2849841.370925862 2394264.6265869327 2672925.9701671912 2606528.786526683 2765441.3531116336 0.838955388078321 1.109090454571895 0.9142015648249797 1.2040504896701643 0.9696674800121449 1.0305195471671322 0.86578029358422 0.9665458886552248 0.9425362731319018 1.0 21.399078316378134 -6.722016909863625 24.998998303957205 0.9409275719477997 1.018021173847491 0.09733690986963373 0.09901184220375205 325.37786616813423 206331.52123494295 0.03578380281531838 0.027717613398294625 1.8966320717486151e-07 6.722016909863625 0.07709360189969117 NHS(ph)GS(ph)RT(ph)PPVALNSSR ddPTM_KYSE-520_SHP099_60min_R1 5 NHSGSRTPPVALNSSR 16 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 NHS(1)GS(1)RT(1)PPVALNSSR;NHS(1)GS(1)RT(1)PPVALNSSR;NHS(1)GS(0.998)RT(0.786)PPVALNS(0.018)S(0.198)R;NHS(1)GS(1)RT(1)PPVALNSSR;NHS(1)GS(1)RT(0.999)PPVALNS(0.001)S(0.001)R 178.76 4.286000000000001e-08 3842800000.0 2779350.0 3668130.0 3223080.0 3177060.0 3218200.0 3660490.0 3120390.0 4256450.0 3627850.0 3398260.0 True False 2625173.915003135 3491907.528824617 3430844.893910333 3479006.8271820773 3471454.03094677 3637643.524120177 3435829.473271674 4241685.368412897 2969123.890656215 3368154.0602062754 0.7794102847072149 1.036742223308741 1.0186128165705752 1.0329120239140763 1.0306696097904051 1.0800110265435416 1.0200927308714773 1.259350164093481 0.8815285279659617 1.0 21.683526698468494 -4.257228878790996 4.637938424565862 1.0486022129607042 0.7620314258809863 0.43723465360065883 0.08829881004006412 0.16901660793294537 9.775452871616165 0.020715264657954514 0.158242963712491 5.530585634052005e-05 4.257228878790996 -0.28657078707971795 NHS(ph)PS(ph)PPVTPTGAAPSLASPK ddPTM_KYSE-520_SHP099_60min_R1 1 NHSPSPPVTPTGAAPSLASPK 21 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 2 NHS(0.988)PS(0.99)PPVT(0.021)PT(0.001)GAAPSLASPK 81.53399999999999 0.0037967 682600000.0 558300.0 686200.0 636100.0 557240.0 709290.0 784150.0 674410.0 837830.0 896650.0 702930.0 True False 527329.9860565424 653233.9219928009 677104.0237959858 610199.9220596843 765107.08769195 779255.8289843262 742585.9444073188 834923.7632809917 733840.9627070841 696702.5870712646 0.7568939685917982 0.9376080039243239 0.9718695414098211 0.8758398969419471 1.0981832160380487 1.1184913669692134 1.0658578828147238 1.1983933729753593 1.0533059246872305 1.0 19.410183394909616 -5.764985909130745 24.939760765952446 1.0992719256444174 0.8954365377173388 0.660842664033594 0.07104817757696547 52.9603796697758 372426.0217356736 0.02132257656701609 0.025146691357581342 1.717964126330404e-06 5.764985909130745 -0.20383538792707867 NHSPS(ph)PPVTPTGAAPSLASPK ddPTM_KYSE-520_SHP099_60min_R1 1 NHSPSPPVTPTGAAPSLASPK 21 0 Q5SYE7-2;Q5SYE7 Q5SYE7-2 NHSL1 NHS-like protein 1 1 NHS(0.217)PS(0.782)PPVT(0.001)PTGAAPSLASPK 102.69 0.00027303 0.0 175780.0 203750.0 185700.0 157630.0 173710.0 248760.0 218710.0 259840.0 250490.0 211560.0 True False 166029.13299125747 193961.54416501478 197670.5191305053 172611.1078068125 187379.9887253009 247207.39656716314 240819.34120390378 258938.67568711218 205007.33033903717 209685.74299118956 0.7917998173019974 0.9250106440148606 0.9426988993658519 0.8231895280265439 0.8936229333110841 1.178942321212321 1.1484774203939196 1.2348892776081208 0.9776884561371969 1.0 17.677869247100965 -6.250173904041187 22.011064282385885 1.1252099368125668 0.8788812602358879 0.656637165195205 0.0836665385537833 84.81914845943204 165723.4553871607 0.026922539204459247 0.02661323897502561 5.621161925763991e-07 6.250173904041187 -0.2463286765766789 NHSVNEEEQEEQGEGS(ph)EDEWEQVGPR ddPTM_KYSE-520_SHP099_60min_R1 5 NHSVNEEEQEEQGEGSEDEWEQVGPR 26 0 Q14694;Q14694-3;Q14694-2;H3BNA1 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR;NHSVNEEEQEEQGEGS(1)EDEWEQVGPR 337.93 2.6924999999999996e-73 5574290000.0 882917.0 1069794.0 1002920.0 952909.0 1028924.0 1027051.0 1001227.0 1083770.0 1173055.0 1007338.0 True False 833939.8339585962 1018399.4904464696 1067569.827928736 1043473.1848574611 1109894.465023267 1020640.7937437746 1102440.7961938677 1080010.65482382 960057.7823101095 998413.7690171046 0.8352647567947447 1.0200174737664527 1.0692659306769303 1.0451310040372495 1.1116578110855886 1.0222623379368572 1.1041923002315694 1.0817265229495423 0.9615830751765824 1.0 19.929278304826596 -4.2642126296965985 3.0892752971733595 1.0552892708835289 0.8017904267823835 0.67466001443995 0.04419735405146037 0.19389883196230048 2.8256317137972347 0.010810639224374512 0.11970310846512504 5.442361306987589e-05 4.2642126296965985 -0.2534988441011453 NHTHQQDIDDLKR ddPTM_KYSE-520_SHP099_60min_R1 3 NHTHQQDIDDLKR 13 1 Q6V3B1;G3V563;G3V2R5;P61244-2;G3V570;G3V5L1;P61244-3;P61244-4;P61244 Q6V3B1 MAX Protein max 0 ;; 220.48 2.1438999999999997e-11 1723160000.0 1395710.0 1587600.0 1212460.0 1121130.0 1643290.0 1755680.0 1338350.0 1694550.0 1373450.0 1141180.0 False True 1318287.1840210934 1511329.3129638182 1290617.11160459 1227681.858119975 1772607.5739588935 1744722.1498835722 1473643.4790372844 1688672.0015609425 1124066.101856962 1131070.0330246065 1.1655221564803087 1.3361942840288645 1.141058532117005 1.0854163069257683 1.5671952418531898 1.5425412210930847 1.3028755391004379 1.4929862451091969 0.9938076945165675 1.0 20.10925682948239 -7.780032283287664 24.6434132276792 0.9969032176341395 1.3292216438598472 0.4127889213156133 0.15854381295498124 249.17585442071646 330251.7225631182 0.16295715026137514 0.042395827069408164 1.659463546601775e-08 7.780032283287664 0.33231842622570773 NIDDAS(ph)QMDLFHRDSDDDQTEEQLDESEAR ddPTM_KYSE-520_SHP099_60min_R1 1 NIDDASQMDLFHRDSDDDQTEEQLDESEAR 30 1 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 1 NIDDAS(0.637)QMDLFHRDS(0.363)DDDQTEEQLDESEAR 89.08 0.00086737 259900000.0 178940.0 181650.0 158990.0 160670.0 178210.0 163370.0 162200.0 166230.0 208410.0 183900.0 True False 169013.84149195356 172923.26133779113 169238.74979299417 175940.02849280296 192234.11312380337 162350.3472309753 178596.75891945095 165653.38692837366 170567.99758856147 182270.78907203485 0.927267843368791 0.9487162601213653 0.9285017673682736 0.9652672783638967 1.0546622094658895 0.8907096307506146 0.9798430117558119 0.9088312382457846 0.9357944762128158 1.0 17.475723846358925 -5.097541448942598 0.0031262697939066345 1.8971670430310459 3.411948331543324e-08 0.044228139099946495 0.04460172734139994 272639.6893587894 178.80472539982605 53345.957101354565 55167.893262228645 7.988376971850607e-06 5.097541448942598 -1.8971670089115626 NIDDGTSDRPYSHALVAGIDR ddPTM_KYSE-520_SHP099_60min_R1 7 NIDDGTSDRPYSHALVAGIDR 21 1 K7ELC7;P61353 K7ELC7 RPL27 60S ribosomal protein L27 0 ;;;;;; 204.83 5.729299999999999e-14 13378920000.0 7201440.0 7001090.0 5334560.0 5454400.0 7170340.0 6825620.0 5768250.0 5861990.0 5315180.0 5763550.0 False True 6801961.767485279 6664747.127549664 5678434.273197791 5972784.536074841 7734604.964346183 6783018.77374482 6351361.002694974 5841656.124888745 4350077.296784074 5712489.4309740495 1.1907176108902595 1.1666974981891989 0.9940384733857701 1.0455659670352175 1.353981492273385 1.1874015445816295 1.1118376811792172 1.0226112792812068 0.7615029050552365 1.0 22.44568816027905 -7.450305102935675 3.033629389284025 0.881101021709413 1.1503132741727105 0.5048557709430894 0.10601321441010325 0.22333833266862965 3.916290114507606 0.07851883197510444 0.030059722290470447 3.5456421132716585e-08 7.450305102935675 0.2692122524632975 NIDDGTSDRPYSHALVAGIDRYPR ddPTM_KYSE-520_SHP099_60min_R1 3 NIDDGTSDRPYSHALVAGIDRYPR 24 2 K7ELC7;P61353 K7ELC7 RPL27 60S ribosomal protein L27 0 ;; 226.56 2.5251e-21 1938970000.0 719460.0 724540.0 534990.0 475510.0 603530.0 486430.0 386420.0 396470.0 562340.0 400030.0 False True 679550.1195920471 689732.0108432883 569476.3114142651 520702.3274327056 651024.3773840351 483394.0099379526 425483.1046957729 395094.738106794 460233.23143779876 396486.04541863024 1.7139319969623226 1.7396123238461871 1.4363085863790814 1.3132929480101159 1.6419856005188034 1.2191955190442088 1.0731351320234388 0.9964909047167922 1.1607804026289525 1.0 18.596910564679764 -5.770626475668131 0.4455210703702989 0.971835385902448 1.8322825223995334 0.7862386936078487 0.1267124019054278 0.74014878388298 0.2714323625858391 0.12276385840007883 0.29227033698261157 1.6957956790499627e-06 5.770626475668131 0.8604471364970854 NIDEHANEDVER ddPTM_KYSE-520_SHP099_60min_R1 2 NIDEHANEDVER 12 0 P61026 P61026 RAB10 Ras-related protein Rab-10 0 ; 122.34 0.0001937 238650000.0 604590.0 625760.0 387310.0 442700.0 629880.0 614760.0 486760.0 619990.0 616260.0 541610.0 False True 571052.1874797158 595697.5503150908 412276.6223179106 484774.0748973921 679447.9724730445 610923.054806356 535966.4511198025 617839.3993967538 504362.71865038504 536811.7567662039 1.0637848003176735 1.1096954245257584 0.7680096740084407 0.9030615831100816 1.2657099325955385 1.1380582617761659 0.9984253220318915 1.1509423771168252 0.9395522961134563 1.0 19.034056742924538 NIEDVIAQGIGK ddPTM_KYSE-520_SHP099_60min_R1 1 NIEDVIAQGIGK 12 0 P05387;H0YDD8 P05387 RPLP2 60S acidic ribosomal protein P2 0 147.72 0.00017269 351400000.0 348480.0 468210.0 413730.0 272150.0 453020.0 532440.0 381150.0 392620.0 467050.0 465200.0 False True 329149.1197223429 445716.4888024625 440399.69779140525 298015.05417511903 488670.0966687922 529116.8444614107 419680.3616655284 391258.0928581972 382245.4933723791 461078.6899201235 0.7138675608264701 0.9666820404987221 0.9551508395838015 0.646343152893808 1.0598409932010706 1.1475629996109211 0.9102141800095622 0.8485711905834948 0.8290244197548984 1.0 18.814653463420207 -5.79940604285621 24.999999104677023 0.9645994116512968 0.8405676979444106 0.2332072310763298 0.1270476963807247 307.50842032126667 202484.15135164929 0.04216805989278258 0.04781504644359991 1.5870622337107766e-06 5.79940604285621 -0.12403171370688626 NIGLGFK ddPTM_KYSE-520_SHP099_60min_R1 1 NIGLGFK 7 0 P62280;M0QZC5 P62280 RPS11 40S ribosomal protein S11 0 108.24 0.025096 443390000.0 414770.0 595280.0 360670.0 301460.0 615840.0 465020.0 389220.0 480400.0 528060.0 398770.0 False True 391761.8812765038 566681.8552665034 383919.36529240344 330110.6677627461 664303.1043497161 462117.63768958935 428566.1560211389 478733.6045262033 432177.6153093219 395237.2080383655 0.9912069848405457 1.433776587176721 0.9713644299783044 0.8352216366499138 1.6807706633866122 1.169215924743431 1.0843264432217579 1.2112564171330065 1.0934638908474694 1.0 18.592359244551744 -8.009433827902713 4.018611323710327 1.0002203010247541 1.176543183776749 0.05292391547006958 0.22874918358820007 0.6214051849222477 28.630234600675077 0.2190205151720061 0.05756585467350027 9.785120362574566e-09 8.009433827902713 0.17632288275199492 NIGNGIIS(ph)SPLTGK ddPTM_KYSE-520_SHP099_60min_R1 2 NIGNGIISSPLTGK 14 0 A0A075B784;Q9P275;E9PEW0;K7EMM6 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 NIGNGIIS(0.742)S(0.258)PLTGK;NIGNGIIS(0.5)S(0.5)PLT(0.001)GK 85.958 0.0056301 108010000.0 451650.0 509690.0 385620.0 324800.0 407870.0 493130.0 354670.0 427760.0 553020.0 470730.0 True False 426596.074158047 485203.7273397122 410477.68221381493 355668.89434531936 439967.048537151 490052.1927527141 390523.5048456334 426276.2003999342 452605.50849971775 466559.69842239784 0.9143440284287694 1.0399606502240901 0.8797966982613031 0.7623223684942373 0.9430026854544747 1.0503526009849384 0.8370279434038784 0.9136584275095421 0.9700913088510128 1.0 18.831702166676894 -5.961682744232743 24.999995622959446 0.9476356170793867 0.9008971702916359 0.09146772378866352 0.08145750269146264 524.7636643320919 342378.4356046448 0.027025528268243684 0.03064403124517347 1.0922379340734296e-06 5.961682744232743 -0.046738446787750854 NIGNGIISS(ph)PLTGK ddPTM_KYSE-520_SHP099_60min_R1 1 NIGNGIISSPLTGK 14 0 A0A075B784;Q9P275;E9PEW0;K7EMM6 A0A075B784 USP36 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 36 1 NIGNGIIS(0.216)S(0.784)PLTGK 88.507 0.0027679000000000002 103710000.0 202570.0 189820.0 154270.0 130510.0 146250.0 189910.0 127740.0 182080.0 218900.0 185940.0 True False 191333.03828671627 180700.76227437108 164214.49104072741 142913.63116073754 157759.04295132836 188724.70124646224 140653.20582226067 181448.40697779137 179153.27801994164 184292.71625913118 1.0382018463371379 0.9805095173717582 0.8910525297691523 0.7754708599540573 0.8560242973981987 1.024048617206875 0.7632054520510205 0.9845663499943185 0.9721126350323958 1.0 17.491639527367 -9.97619964192354 7.878494331841945 1.0000000007249845 0.9156015864438577 0.05966224018202615 0.09271869863559867 1.1689153625421392e-09 1.741349924314792e-10 0.09206809536515446 0.022329793055292434 1.056331809757511e-10 9.97619964192354 -0.08439841428112682 NIGRDT(ph)PTSAGPNSFNK ddPTM_KYSE-520_SHP099_60min_R1 4 NIGRDTPTSAGPNSFNK 17 1 Q8WW12;Q8WW12-3 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 NIGRDT(0.99)PT(0.008)S(0.001)AGPNSFNK;NIGRDT(0.946)PT(0.048)S(0.005)AGPNSFNK;NIGRDT(0.982)PT(0.013)S(0.004)AGPNSFNK;NIGRDT(0.847)PT(0.076)S(0.076)AGPNSFNK 154.31 9.0876e-06 8111600000.0 4299890.0 4786080.0 4235620.0 3302730.0 3442400.0 3938400.0 3168730.0 4445260.0 5241910.0 4375520.0 True False 4061366.5300817965 4556149.532747458 4508654.842431613 3616620.4661980188 3713297.2954232697 3913818.984724696 3489056.1522246134 4429840.430591487 4290111.281797682 4336756.296903052 0.9364986759763475 1.0505892470833738 1.0396375848122517 0.8339459768077597 0.8562384052050597 0.9024761173505684 0.8045312932885357 1.0214639992002565 0.989244261860257 1.0 22.048184942862296 -5.244038935540508 24.91924934293919 0.908683746334758 1.0130765843926712 0.2472992474012956 0.0739915031836768 1078.392285606714 1544367.9267646838 0.020931341593754774 0.03614642481953142 5.701131579793962e-06 5.244038935540508 0.10439283805791322 NIHLNLDR ddPTM_KYSE-520_SHP099_60min_R1 5 NIHLNLDR 8 0 Q9Y5S9;Q9Y5S9-2;A0A0J9YW13 Q9Y5S9 RBM8A RNA-binding protein 8A 0 ;;;; 149.72 0.00072213 2362380000.0 2169750.0 2103760.0 1499010.0 1510920.0 2324520.0 2225280.0 1657980.0 2028770.0 1664280.0 1791430.0 False True 2049389.642210607 2002692.2117918632 1595638.5831008032 1654517.3825253374 2507446.4992904062 2211391.202094295 1825584.798725471 2021732.6703884762 1362088.7050846464 1775559.3239114506 1.1542220046446685 1.1279218806274816 0.8986681332537554 0.9318288385208865 1.4122009135502451 1.2454617383454882 1.0281744879713832 1.1386455204068995 0.767132185752063 1.0 20.759842132940204 -7.746649964412701 24.979953226797996 0.8835660872924234 1.1151875828772373 0.28160285838684085 0.149201387401374 282.1536979728018 476574.6422067841 0.1085095362946855 0.040633351291104444 1.7920496403420872e-08 7.746649964412701 0.23162149558481393 NIIEATHMYDNAAEACSTTEEVFNS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 NIIEATHMYDNAAEACSTTEEVFNSPR 27 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 NIIEATHMYDNAAEACSTTEEVFNS(1)PR;NIIEATHMYDNAAEACSTTEEVFNS(1)PR;NIIEATHMYDNAAEACSTTEEVFNS(1)PR;NIIEATHMYDNAAEACSTTEEVFNS(1)PR 234.83 5.888499999999999e-31 2816350000.0 931920.0 939780.0 811170.0 789340.0 845120.0 792520.0 793980.0 873000.0 1015920.0 813240.0 True False 880224.5398635379 894631.558161462 863459.3161178901 864358.6362762754 911626.1359249688 787573.5887096319 874243.2468980624 869971.7667597322 831454.5372591112 806035.3262911465 1.0920421365571684 1.1099160656865725 1.071242522447461 1.0723582553800652 1.1310002256596903 0.9770956222645185 1.084621502782967 1.0793221319005706 1.0315361003901995 1.0 19.620483543895023 -6.239930971355193 24.99570671126919 1.042604343604379 1.0935107996326432 0.4265215744355185 0.034587170755013004 954.6527474348345 1109436.9717717208 0.011352269028508407 0.011340732285592495 5.755314075207428e-07 6.239930971355193 0.05090645602826416 NIIFFGK ddPTM_KYSE-520_SHP099_60min_R1 2 NIIFFGK 7 0 P36952 P36952 SERPINB5 Serpin B5 0 ; 108.24 0.025096 958960000.0 2192680.0 2188680.0 1367790.0 1190060.0 1840470.0 1859660.0 1441310.0 1638460.0 1547570.0 1652310.0 False True 2071047.669400787 2083532.5275243449 1455959.931941377 1303162.9445954151 1985304.518158161 1848053.1721341475 1587011.6806300485 1632776.5646794373 1266570.2990649682 1637671.818877728 1.2646292410527311 1.2722527819720062 0.8890425512354023 0.7957412038075207 1.2122725049507541 1.128463682913339 0.9690657568484045 0.9970108454319955 0.7733968945822918 1.0 20.643214846501834 -4.7508577587931 24.9851125884425 0.9784833696902829 1.2684412092727007 0.46680505151048945 0.12709456884713238 196.46547548435808 463881.3979497659 0.03448820785647871 0.08919320855683073 1.7747706630034886e-05 4.7508577587931 0.2899578395824177 NIIGSS(ph)PVADFSAIK ddPTM_KYSE-520_SHP099_60min_R1 8 NIIGSSPVADFSAIK 15 0 P42566;B1AUU8 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 NIIGS(0.003)S(0.997)PVADFSAIK;NIIGS(0.102)S(0.898)PVADFSAIK;NIIGS(0.005)S(0.995)PVADFSAIK;NIIGS(0.021)S(0.979)PVADFSAIK;NIIGS(0.018)S(0.982)PVADFSAIK;NIIGS(0.016)S(0.984)PVADFSAIK;NIIGS(0.035)S(0.965)PVADFSAIK;NIIGS(0.023)S(0.977)PVADFSAIK 218.28 3.1304e-14 6331380000.0 10377800.0 11993310.0 8628080.0 7443920.0 8282990.0 11878580.0 8130800.0 10407540.0 13078430.0 12281110.0 True False 9802122.746368593 11417133.385274662 9184259.842216097 8151387.918703842 8934814.189233659 11804441.376084467 8952740.61296099 10371438.672878109 10703716.792390812 12172308.919959009 0.8052804780772522 0.9379595490346059 0.7545207653378407 0.6696665334658046 0.7340278864088957 0.9697783266680534 0.7355006081287608 0.8520518778382299 0.8793497489075276 1.0 23.537099517672036 -8.18388016686392 0.9187592417855682 1.0007593669453918 0.79942829287589 0.32493988773691107 0.0873492121680738 1.0445658678197278 1.8402495056133672 0.08851904464792106 0.030063125733773764 6.548168301262217e-09 8.18388016686392 -0.2013310740695018 NIIHGS(ph)DSVK ddPTM_KYSE-520_SHP099_60min_R1 2 NIIHGSDSVK 10 0 Q32Q12;P22392-2;P22392;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 1 NIIHGS(0.999)DS(0.001)VK;NIIHGS(0.994)DS(0.006)VK 170.95 2.8644000000000002e-05 1538410000.0 1292910.0 1406740.0 1610980.0 1886830.0 1659930.0 1228480.0 1698480.0 1863530.0 2053550.0 1697460.0 True False 1221189.7049478148 1339158.0988402122 1714826.3484591348 2066153.7559038757 1790557.047290248 1220812.600638481 1870178.9339673803 1857065.849381173 1680677.0857827824 1682421.825003898 0.7258522724792787 0.79597047478691 1.0192606414001801 1.2280830676332248 1.0642735494031643 0.7256281287456864 1.1115993065312544 1.1038051348251325 0.9989629597077346 1.0 20.68210803980647 -4.722153012444562 4.089556580600306 1.0365052491840634 0.7450049084726682 0.446451874342357 0.12150059366157487 0.1941548987688353 6.845014982603343 0.03363946427063878 0.09319143442165694 1.8960377835717725e-05 4.722153012444562 -0.2915003407113952 NIIHGSDS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 1 NIIHGSDSVK 10 0 Q32Q12;P22392-2;P22392;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 1 NIIHGS(0.346)DS(0.654)VK 173.72 3.4494e-05 551580000.0 484290.0 558560.0 643250.0 742730.0 668460.0 528360.0 591560.0 663900.0 841860.0 678650.0 True False 457425.46829181927 531725.9391843468 684714.9242363891 813318.8358900826 721063.9989828708 525062.30925481 651360.6578692386 661597.0858554256 688999.4455635824 672637.6889817099 0.6800473357124914 0.790508691223226 1.01795503798332 1.209148475045082 1.071994642575667 0.780601976154041 0.9683677684717875 0.9835861068935962 1.024324769262695 1.0 19.359470092111383 -4.6425212269313985 3.6570067345105475 1.0066314571611146 0.7015893093862025 0.5515704822527455 0.10001901141053596 0.1817019997364555 4.484229773282298 0.029041524627103646 0.09096403623611699 2.2776069169629775e-05 4.6425212269313985 -0.3050421477749121 NIILEEGK ddPTM_KYSE-520_SHP099_60min_R1 5 NIILEEGK 8 0 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 0 ;;;; 132.76 0.0058187 3501970000.0 6065660.0 7263660.0 4755970.0 4211430.0 6731930.0 8173100.0 5962110.0 6874300.0 6039000.0 7383600.0 False True 5729185.748206566 6914702.870624067 5062547.436021048 4611683.040987399 7261694.591557854 8122088.651242481 6564818.263386249 6850454.657773676 4942469.830801408 7318187.048353879 0.782869542736717 0.944865555490199 0.6917761738762601 0.6301674185855541 0.9922805393709181 1.1098498299615651 0.8970552706579029 0.9360863028657607 0.6753680656349369 1.0 22.803054859869153 -5.781228907099056 24.99890946629661 0.9387455878637142 0.7704055033394317 0.30353712967825097 0.12784704175058986 332.60860023219135 420162.39314488857 0.04190163119305893 0.04757486066677167 1.6548974733816473e-06 5.781228907099056 -0.1683400845242825 NIILEEGKEILVGDVGQTVDDPYATFVK ddPTM_KYSE-520_SHP099_60min_R1 9 NIILEEGKEILVGDVGQTVDDPYATFVK 28 1 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 0 ;;;;;;;; 244.62 5.033699999999999e-31 3961177700.0 913917.0 965537.0 415493.0 763108.0 342917.2 660027.0 445616.9 772914.0 695354.0 507660.0 False True 863220.2021616286 919151.1532194165 442276.3435923049 835633.5548832141 369902.83270802925 655907.5266684156 490664.20505384135 770232.9417334845 569095.2420478694 503162.52735350374 1.7155892087233304 1.8267480252432515 0.8789930083199093 1.6607626948660432 0.7351557649843605 1.3035699023898073 0.9751604668070174 1.530783593493533 1.131036615626274 1.0 18.940664957038916 -4.746750754766825 24.999017022224034 1.1732792335875915 1.7711690276355385 0.4523988821299254 0.27170229257772766 202.73226780117992 345030.52392409707 0.06416562505779776 0.1682019393678492 1.7916337926446075e-05 4.746750754766825 0.5978897940479471 NIIS(ph)PPWDFR ddPTM_KYSE-520_SHP099_60min_R1 10 NIISPPWDFR 10 0 Q5T8C6;Q13042-4;Q13042-3;Q13042-2;Q13042 Q5T8C6 CDC16 Cell division cycle protein 16 homolog 1 NIIS(1)PPWDFR;NIIS(1)PPWDFR;NIIS(1)PPWDFR;NIIS(1)PPWDFR;NIIS(1)PPWDFR;NIIS(1)PPWDFR;NIIS(1)PPWDFR;NIIS(1)PPWDFR;NIIS(1)PPWDFR;NIIS(1)PPWDFR 129.76 0.00036689 2846239000.0 1488619.0 1369304.0 1307457.0 1302849.0 1431488.0 1419693.0 1300752.0 1340085.0 1693664.0 1446644.0 True False 1406042.336581594 1303520.580472793 1391737.7702251638 1426671.3772441652 1544137.9615474264 1410832.1693786213 1432244.7062761632 1335436.5579131902 1386137.3113950053 1433827.8596319996 0.9806214373198628 0.90911930028152 0.9706449493751373 0.9950088273569526 1.076933992581047 0.9839620285664694 0.9988958553530668 0.9313785814260422 0.966739000141039 1.0 20.45144039882952 -4.991822498575048 7.86301822129557 0.992960026704924 0.9435008235833764 0.2088873290962765 0.03776570738181198 0.20826261032059498 92.53088031080311 0.01071312126791369 0.021474879981906315 1.0190077838023037e-05 4.991822498575048 -0.04945920312154761 NIIS(ph)PPWDFREFEVEK ddPTM_KYSE-520_SHP099_60min_R1 3 NIISPPWDFREFEVEK 16 1 Q5T8C6;Q13042-4;Q13042-3;Q13042-2;Q13042 Q5T8C6 CDC16 Cell division cycle protein 16 homolog 1 NIIS(1)PPWDFREFEVEK;NIIS(1)PPWDFREFEVEK;NIIS(1)PPWDFREFEVEK 93.77600000000001 0.0011282 307191000.0 541300.0 665000.0 641640.0 369650.0 516320.0 464125.0 326312.0 357206.0 858370.0 422510.0 True False 511273.0099452023 633052.4018146493 683001.1410602989 404781.42486067524 556951.446541059 461228.22371657315 359298.80145822396 355966.935758507 702511.6457468133 418766.8901078057 1.2209012269656327 1.5117059556730448 1.630981716067547 0.9666032210819482 1.3299796609939232 1.1013961098926335 0.8579923817896097 0.8500360084983516 1.6775720868618849 1.0 18.675787854227988 -5.264727192517745 24.95977168947938 1.103755939029427 1.460247266485313 0.2827187320628878 0.24977634910181695 349.4642944992125 2653000.1079849782 0.06952726567858437 0.10812910702178107 5.435916881497168e-06 5.264727192517745 0.3564913274558861 NILFVITKPDVYK ddPTM_KYSE-520_SHP099_60min_R1 2 NILFVITKPDVYK 13 1 F8VZJ2;F8W0W4;H0YHX9;Q13765;E9PAV3-2;E9PAV3;F8W1N5;F8VZ58;F8VNW4;Q9BZK3 F8VZJ2 NACA;NACAP1 Nascent polypeptide-associated complex subunit alpha;Nascent polypeptide-associated complex subunit alpha, muscle-specific form;Putative nascent polypeptide-associated complex subunit alpha-like protein 0 ; 124.48 0.00067097 52885000.0 161063.0 156847.0 142668.0 110448.0 197594.0 202221.0 117068.0 126273.0 132756.0 101937.0 False True 152128.51431886957 149311.83468785314 151864.60755687102 120944.94471259792 213143.52364393006 200958.86372892885 128902.37591357777 125834.98843533978 108650.85690642019 101033.91748578582 1.5057172690574143 1.477838714002745 1.503105207993508 1.1970727031307415 2.1096234704936254 1.9890237727068358 1.2758327017430824 1.2454727240784578 1.0753899245934513 1.0 16.624480167158353 -6.98142216544893 23.279123220493826 1.1483892249888974 1.6208186108493867 0.4723451094871911 0.25266327534723093 110.02343964087581 137864.91442441542 0.11608347912624693 0.07824162868472063 1.0437051695147756e-07 6.98142216544893 0.4724293858604893 NIMTQQKDS(ph)FEMEEVQSTEGEAPHVPATYQLGLTK ddPTM_KYSE-520_SHP099_60min_R1 1 NIMTQQKDSFEMEEVQSTEGEAPHVPATYQLGLTK 35 1 P28290-3;P28290;E9PHV5;P28290-2 P28290-3 SSFA2 Sperm-specific antigen 2 1 NIMT(0.002)QQKDS(0.998)FEMEEVQSTEGEAPHVPATYQLGLTK 275.94 3.2413e-42 868080000.0 604470.0 704430.0 500390.0 589460.0 512340.0 538190.0 512570.0 554390.0 699680.0 617150.0 True False 570938.8441189292 670588.1254290127 532645.9400523083 645482.1011723881 552658.2431841609 534830.9565785556 564385.5778011284 552466.9504855981 572635.7494974546 611682.5311354351 0.933390795155004 1.0963009262079695 0.8707882160106563 1.0552567194852083 0.9035050292482435 0.8743603574648048 0.9226772861299279 0.9031922972527625 0.9361649554295757 1.0 19.222423549590218 -4.770569267328409 24.999812837058574 0.930600945591715 1.014845876386954 0.20171002252558357 0.06476488639494463 251.9443425039179 689889.68725857 0.016288872501982337 0.03469340510783147 1.6960190759598727e-05 4.770569267328409 0.08424493079523887 NINDGLSSLFSVVEHSGS(ph)TESVWK ddPTM_KYSE-520_SHP099_60min_R1 2 NINDGLSSLFSVVEHSGSTESVWK 24 0 O94964-2;H0YDM2;O94964-3;O94964 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 NINDGLSSLFSVVEHS(0.001)GS(0.96)T(0.024)ES(0.014)VWK;NINDGLSSLFSVVEHS(0.001)GS(0.944)T(0.024)ES(0.031)VWK 121.5 0.00011535 85221000.0 76435.0 100794.0 95646.0 163177.0 87752.0 86393.0 81010.0 78649.0 113431.0 78011.0 True False 72194.9981806051 95951.70494512146 101811.49419901075 178685.2930190458 94657.58315941857 85853.78924114385 89199.28138141008 78376.18497581455 92834.78976281415 77319.88323163957 0.9337184067430491 1.2409706395658093 1.3167569575085587 2.310987621175392 1.2242333951260334 1.1103714290920215 1.1536396286862138 1.0136614503285066 1.2006586906590908 1.0 16.238551838344566 -5.987139334574768 24.999907181079305 1.1076053590282127 1.4687654838223345 0.20188296740956035 0.3319338315718472 397.1377217145246 771993.2017073798 0.10901166734481946 0.12353821718596478 1.0300555949804916e-06 5.987139334574768 0.36116012479412185 NINMDNDLEVLTSS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 12 NINMDNDLEVLTSSPTR 17 0 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 NINMDNDLEVLT(0.001)S(0.08)S(0.919)PTR;NINMDNDLEVLTS(0.381)S(0.619)PTR;NINMDNDLEVLT(0.001)S(0.173)S(0.822)PT(0.004)R;NINMDNDLEVLT(0.001)S(0.281)S(0.714)PT(0.003)R;NINMDNDLEVLTSS(1)PTR;NINMDNDLEVLTS(0.001)S(0.977)PT(0.023)R;NINMDNDLEVLTS(0.006)S(0.994)PTR;NINMDNDLEVLTSS(1)PTR;NINMDNDLEVLTS(0.108)S(0.89)PT(0.003)R;NINMDNDLEVLT(0.001)S(0.17)S(0.827)PT(0.002)R;NINMDNDLEVLTS(0.058)S(0.942)PTR;NINMDNDLEVLTS(0.125)S(0.873)PT(0.002)R 434.45 5.4670999999999985e-118 9533510000.0 6602270.0 7897070.0 6078530.0 4844560.0 5189710.0 6902450.0 5458660.0 6689480.0 8286790.0 7199710.0 True False 6236028.9218010595 7517682.9034562735 6470361.769791879 5304985.525829922 5598110.651589328 6859369.249216182 6010474.62418774 6666275.755216375 6782117.828976125 7135926.170689625 0.8738920180277596 1.0534978534860255 0.9067304810927682 0.7434193402420308 0.7844967167097694 0.9612444250601438 0.8422837457141011 0.9341850792399857 0.9504187216556773 1.0 22.766669258330857 -9.536630817888922 7.904818039184887 1.0000037294100461 0.8934224348609013 0.12111151403201481 0.08524880009447598 0.0 0.0 0.08842581902840484 0.02144641128740384 2.906492335925779e-10 9.536630817888922 -0.10658129454914478 NINPSTANS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 NINPSTANSPK 11 0 P46937-6;P46937;P46937-7;P46937-9;P46937-4;H0YCI3 P46937-6 YAP1 Transcriptional coactivator YAP1 1 NINPSTANS(1)PK;NINPSTANS(1)PK;NINPSTANS(1)PK;NINPSTANS(1)PK;NINPSTANS(1)PK;NINPST(0.001)ANS(0.999)PK;NINPSTANS(1)PK 229.48 1.7808000000000002e-10 10913220000.0 14563930.0 14170290.0 11816470.0 9383190.0 10634230.0 12517730.0 10845750.0 13001770.0 15126740.0 12811080.0 True False 13756039.770425322 13489527.998361073 12578178.56322048 10274965.556441044 11471083.400508069 12439602.203853829 11942144.254319593 12956669.894505933 12380105.330083929 12697583.798069408 1.0833588491470987 1.062369677009895 0.9905962239156805 0.8092063592447637 0.9034067884830324 0.9796826232204269 0.9405052523563834 1.0204043620075118 0.9749969385487537 1.0 23.598050659305073 -4.84652654958527 3.873947072547315 0.9442754203374333 1.0748350636373791 0.4366297359776973 0.05622276187797254 0.2067503227668762 5.874888378457003 0.01624807506299973 0.03853396929663693 1.4238801983740412e-05 4.84652654958527 0.13055964329994585 NINTFVET(ph)PVQK ddPTM_KYSE-520_SHP099_60min_R1 4 NINTFVETPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 NINTFVET(1)PVQK;NINTFVET(1)PVQK;NINTFVET(1)PVQK;NINTFVET(1)PVQK 336.06 5.8562e-50 4382520000.0 4736980.0 5512300.0 4121150.0 3254760.0 3311530.0 4242930.0 3724330.0 5029220.0 5549200.0 5248410.0 True False 4474210.276464476 5247480.833869016 4386805.923073142 3564091.4118207255 3572128.570971714 4216448.300035024 4100821.622358069 5011774.809648772 4541605.163948202 5201913.170601196 0.8601086042248149 1.008759789287785 0.843306256602924 0.6851501159156826 0.6866951549979209 0.8105572241890613 0.7883295026018531 0.9634483785644485 0.873064392849779 1.0 22.310610887599978 -7.260842923620261 24.99962756912873 0.9386922946597743 0.8108918628678576 0.31034194919551583 0.09113078598970849 80.2386069757733 3363258.297782076 0.05208755018538658 0.0277747667886466 5.4847530254767676e-08 7.260842923620261 -0.1278004317919167 NISFNDKK ddPTM_KYSE-520_SHP099_60min_R1 2 NISFNDKK 8 1 E7EQR4;P15311;P26038;A0A2R8Y7M3;A0A2R8Y5S7;P35241;P35241-5;P35241-4 E7EQR4;P26038;A0A2R8Y7M3 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 ; 142.43 0.0014133 1810190000.0 1842610.0 1758550.0 1205050.0 1152800.0 1678900.0 1804880.0 1392360.0 1578490.0 1615490.0 1378780.0 False True 1740396.7501480295 1674066.6183626363 1282729.451148171 1262361.765398043 1811019.8783657094 1793615.0744337586 1533113.3369240882 1573014.586612337 1322157.7391888332 1366565.0818746092 1.2735557005163707 1.2250178499118436 0.9386522955705591 0.9237480030342766 1.3252350015276344 1.3124988324546798 1.1218736357737267 1.151071842443484 0.9675044070167083 1.0 20.382122738341465 -7.756911094532792 23.099431286948384 0.9837520928141865 1.155399553657698 0.21914436987843122 0.13215307998368062 69.46713121395271 354404.99503438035 0.10640925964511827 0.03697206801838993 1.7502049406140667e-08 7.756911094532792 0.17164746084351146 NISSS(ph)PSVESLPGGR ddPTM_KYSE-520_SHP099_60min_R1 4 NISSSPSVESLPGGR 15 0 Q92609;Q92609-2;C9J3F6 Q92609 TBC1D5 TBC1 domain family member 5 1 NIS(0.022)S(0.099)S(0.781)PS(0.099)VESLPGGR;NIS(0.001)S(0.143)S(0.856)PS(0.001)VESLPGGR;NISS(0.015)S(0.803)PS(0.182)VESLPGGR;NISS(0.093)S(0.897)PS(0.01)VESLPGGR 248.25 4.9174e-19 1972610000.0 1989720.0 2275160.0 1837560.0 1567840.0 1897210.0 2217660.0 1710680.0 1857330.0 2412550.0 2317670.0 True False 1879346.2651915178 2165857.8985152165 1956012.0577999558 1716847.042211716 2046509.633351724 2203818.7613407923 1883612.2290279057 1850887.3557340791 1974491.7354363194 2297137.2469199756 0.8181253722263935 0.942850890350248 0.8514998659407905 0.7473854879649362 0.8908956729057893 0.9593761819393658 0.8199824505712368 0.8057365132256539 0.8595445213749145 1.0 21.131405625228343 NIVQNS(ph)FS(ph)KVQEK ddPTM_KYSE-520_SHP099_60min_R1 1 NIVQNSFSKVQEK 13 1 Q9NZL3 Q9NZL3 ZNF224 Zinc finger protein 224 2 NIVQNS(1)FS(1)KVQEK 86.49700000000001 0.0044987 518050000.0 447350.0 404090.0 439460.0 213240.0 401440.0 410290.0 394730.0 434290.0 467730.0 424150.0 True False 422534.6037298837 384676.9098485441 467788.2947608614 233506.26548705608 433031.04411884665 407729.2279206523 434633.1605935572 432783.5493540475 382802.0225137842 420392.3609837071 1.0050958174909834 0.9150425781962598 1.1127421384780851 0.5554484028697798 1.0300640171138347 0.9698778231045316 1.0338750199373912 1.0294752938453624 0.9105827270934169 1.0 18.68137692853459 NIYAFMGT(ph)PVQK ddPTM_KYSE-520_SHP099_60min_R1 3 NIYAFMGTPVQK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 NIYAFMGT(1)PVQK;NIYAFMGT(1)PVQK;NIYAFMGT(1)PVQK 214.58 5.0136e-10 2583371000.0 5939840.0 5870740.0 5196140.0 4443540.0 4497020.0 4637740.0 4419610.0 5566980.0 6509400.0 5460580.0 True False 5610345.234422526 5588700.838239602 5531091.498517953 4865852.705600989 4850909.889456298 4608794.144377693 4866387.310036963 5547669.445722898 5327457.048620414 5412203.509466959 1.0366101763558928 1.0326109926324676 1.021966651631454 0.899052058387993 0.8962911097062679 0.851555957996784 0.8991508359810821 1.0250297195992322 0.984341597521544 1.0 22.367784657821677 -5.196230008467384 6.6006821178560475 0.9308441869705243 1.0317481293129858 0.412343049554308 0.05109276960294028 0.2573476999082153 21.433293091432095 0.015514547031892058 0.02703851243814177 6.364583543333991e-06 5.196230008467384 0.10090394234246147 NIYSEELR ddPTM_KYSE-520_SHP099_60min_R1 4 NIYSEELR 8 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;H0YAB0 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ;;; 141.48 0.0045122 2079220000.0 2675720.0 2725330.0 1935800.0 1751090.0 2617170.0 2702890.0 2060820.0 2305220.0 2437350.0 2393980.0 False True 2527292.4776844205 2594401.055996272 2060584.765389514 1917513.0671155956 2823126.389339682 2686020.2609238625 2269147.7972649983 2297223.729862394 1994788.6805934438 2372771.199688258 1.0651227046318095 1.0934054898917906 0.8684296090833536 0.8081323084870232 1.1898013553563838 1.1320182330587796 0.9563281101705574 0.9681606596389108 0.8406999717695179 1.0 21.17814156113736 -6.980309835244886 24.787044321463597 0.9351070063547857 1.0216185182631352 0.11774953484673656 0.11435868297015002 544.1063920417372 684949.0796058138 0.05230594300372583 0.03525961486770472 1.046381769906631e-07 6.980309835244886 0.08651151190834949 NKAGT(ph)PVSELTK ddPTM_KYSE-520_SHP099_60min_R1 4 NKAGTPVSELTK 12 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 NKAGT(0.99)PVS(0.01)ELTK;NKAGT(0.993)PVS(0.007)ELTK;NKAGT(0.999)PVS(0.001)ELTK;NKAGT(1)PVSELTK 115.66 0.00041658 5517050000.0 8207000.0 8586600.0 7470400.0 4567020.0 5248340.0 6153500.0 4130970.0 4688420.0 8899600.0 5452710.0 True False 7751741.349751111 8174086.847250638 7951953.937062614 5001068.207675372 5661354.499030255 6115093.723975069 4548568.761982032 4672156.965305453 7283656.9806590825 5404403.23154419 1.434338079088192 1.5124864850092008 1.471384276185942 0.9253691838694328 1.047544799393632 1.131502121877722 0.8416412630784358 0.8645093204806049 1.347726412815784 1.0 22.36570388988827 -5.25401556974576 24.41206406321162 1.0150031977348921 1.4767113638789415 0.6917448821827146 0.13762324106697305 226.2005666215319 743822.9926436847 0.037406167112249 0.0631249234019977 5.571657738106501e-06 5.25401556974576 0.4617081661440494 NKAS(ph)PQSEFMPSK ddPTM_KYSE-520_SHP099_60min_R1 5 NKASPQSEFMPSK 13 1 Q9NQW6;Q9NQW6-2;H7C1K5 Q9NQW6 ANLN Actin-binding protein anillin 1 NKAS(1)PQSEFMPSK;NKAS(1)PQSEFMPSK;NKAS(0.957)PQS(0.043)EFMPSK;NKAS(0.999)PQS(0.001)EFMPSK;NKAS(0.998)PQS(0.002)EFMPSK 116.19 0.00010640000000000001 2958560000.0 5998070.0 5532140.0 5819700.0 4987520.0 5484270.0 5402830.0 5160240.0 5628250.0 6753770.0 5914190.0 True False 5665345.1002438925 5266367.690488567 6194847.173849224 5461532.401247429 5915850.84777218 5369108.933891969 5681887.4182892 5608726.914393425 5527455.616686815 5861794.8777702 0.9664864121616898 0.898422377497431 1.0568174600141784 0.9317167378134136 1.009221743702936 0.9159496444089754 0.9693084689532098 0.9568275641414049 0.9429629886314674 1.0 22.482911053898647 -6.25980722424734 24.998378431972743 0.9550801288749763 0.9708305958372876 0.02828209913712587 0.044227425404850515 718.3909334888828 11003022.157240774 0.014349984838496654 0.013676778528140452 5.497848596219399e-07 6.25980722424734 0.015750466962311305 NKASPQS(ph)EFMPSK ddPTM_KYSE-520_SHP099_60min_R1 2 NKASPQSEFMPSK 13 1 Q9NQW6;Q9NQW6-2;H7C1K5 Q9NQW6 ANLN Actin-binding protein anillin 1 NKAS(0.43)PQS(0.57)EFMPSK;NKAS(0.474)PQS(0.526)EFMPSK 162.29 1.6059e-06 1892110000.0 847030.0 745360.0 674740.0 706640.0 670650.0 754870.0 728600.0 795300.0 883730.0 804800.0 True False 800043.5573875571 709551.78679183 718234.8200221714 773798.8531409369 723426.3395234762 750158.5763251903 802253.998450752 792541.2899244159 723266.9090203891 797670.0981249245 1.0029754898274512 0.8895303816198785 0.9004158758245033 0.9700737873462959 0.9069242299843352 0.9404371281919441 1.0057466117090297 0.9935702639317121 0.9067243597579573 1.0 19.605432671752514 -6.5924486883609505 8.354229876636056 0.9758136481428091 0.930866154904045 0.19912453416535647 0.04064086880592423 0.42754939161236166 45.9017989053679 0.015248643935961554 0.011794001202179397 2.5559438664983076e-07 6.5924486883609505 -0.044947493238764125 NKDGETPGQILGWGPPWDS(ph)AEEEEEDDASKER ddPTM_KYSE-520_SHP099_60min_R1 2 NKDGETPGQILGWGPPWDSAEEEEEDDASKER 32 2 Q5STV6;A0A0A0MRT5;Q9UBC1-2;Q9UBC1-3;Q9UBC1;A0A140TA04 Q5STV6 NFKBIL1 NF-kappa-B inhibitor-like protein 1 1 NKDGETPGQILGWGPPWDS(0.99)AEEEEEDDAS(0.01)KER;NKDGETPGQILGWGPPWDS(1)AEEEEEDDASKER 146.61 8.089199999999999e-07 824210000.0 208205.0 239866.0 239379.0 159220.0 167972.0 204371.0 149282.0 158014.0 261203.0 169046.0 True False 196655.45360362242 228342.4773137937 254809.75335994206 174352.22092876158 181190.4407700551 203095.44478142672 164372.8814119204 157465.8863147447 213775.1195917899 167548.38395579776 1.1737233685017434 1.3628449998899095 1.5208129576896747 1.0406081921670984 1.0814215959125955 1.2121599742496287 0.981047250537999 0.9398233668209358 1.2759008147054858 1.0 17.354218245907873 -5.279715399176997 24.65233662109856 1.0753056400455525 1.3534989041159406 0.5113788938856081 0.12390338860903385 524.5496916685596 707558.5233632402 0.034977141093372285 0.05199153276098427 5.251514885332313e-06 5.279715399176997 0.27819326407038814 NKDGVLVDEFGLPQIPAS(ph) ddPTM_KYSE-520_SHP099_60min_R1 1 NKDGVLVDEFGLPQIPAS 18 1 Q9NZZ3 Q9NZZ3 CHMP5 Charged multivesicular body protein 5 1 NKDGVLVDEFGLPQIPAS(1) 59.871 0.063766 0.0 86998.0 70035.0 64790.0 62204.0 58707.0 60225.0 63937.0 69846.0 75210.0 53270.0 True False 82172.04751378654 66670.41347532177 68966.46706766527 68115.84945768537 63326.90690286251 59849.11343567055 70400.37592498735 69603.72052817901 61553.75988981185 52798.069243432845 1.5563456901221309 1.2627434001029194 1.3062308538156155 1.2901200826800647 1.1994170963124615 1.1335473871161441 1.3333892116470514 1.3183004894982309 1.1658335384578113 1.0 15.688197552620775 -1.0000000000127847 0.028830327220182365 6.8860665236297866e-15 3.060054045608553 0.5578839963456632 0.09301001142757535 1305.7743147430626 2.8950241900551115 99.74455274198215 233.55446879145666 0.09999999999705622 1.0000000000127847 3.060054045608546 NKDQGTYEDYVEGLR ddPTM_KYSE-520_SHP099_60min_R1 7 NKDQGTYEDYVEGLR 15 1 G8JLA2;P60660-2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;F8VZU9;G3V1Y7;F8VPF3;F8W180 G8JLA2 MYL6 Myosin light polypeptide 6 0 ;;;;;; 246.38 6.5677e-19 10474190000.0 5919150.0 6158270.0 4009680.0 3766730.0 5882140.0 5550730.0 3958520.0 4774470.0 5322600.0 5043330.0 False True 5590802.949967007 5862417.465448271 4268150.388514831 4124718.8866913267 6345030.9532015575 5516085.835131252 4358685.833032221 4757908.477939678 4356150.011827057 4998650.019851366 1.11846257044682 1.1728001444723246 0.8538606166794096 0.8251665690357682 1.2693489098062973 1.1035151117251598 0.8719725957453259 0.9518386882547047 0.8714652945349806 1.0 22.253107089684235 -6.762325951928377 24.99994605764307 0.9198056953852848 1.0523017304457907 0.19837141733022912 0.13102699630499798 45.066059667951535 1270721.3173519927 0.056840422875814575 0.040838575365645974 1.7285185636741205e-07 6.762325951928377 0.1324960350605059 NKDSGSDTASAIIPSTTPSVDS(ph)DDESVVK ddPTM_KYSE-520_SHP099_60min_R1 7 NKDSGSDTASAIIPSTTPSVDSDDESVVK 29 1 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPSTTPS(0.018)VDS(0.978)DDES(0.002)VVK;NKDSGSDTASAIIPSTTPS(0.006)VDS(0.994)DDESVVK;NKDSGSDTASAIIPSTTPS(0.022)VDS(0.977)DDESVVK;NKDSGSDTASAIIPSTTPS(0.009)VDS(0.991)DDESVVK;NKDSGSDTASAIIPSTTPS(0.012)VDS(0.984)DDES(0.005)VVK;NKDSGSDTASAIIPSTTPS(0.207)VDS(0.792)DDESVVK;NKDSGSDTASAIIPS(0.008)T(0.008)T(0.008)PS(0.044)VDS(0.715)DDES(0.215)VVK 214.87 1.7413e-22 8916970000.0 5095137.0 6408413.0 4757085.0 5065830.0 5065212.0 5313021.0 5133254.0 4610752.0 7935100.0 4332041.0 True False 4812499.5937062055 6100543.220255978 5063734.31070511 5547284.960102677 5463815.367286041 5279860.465173933 5652173.410051228 4594758.377469611 6494285.867592685 4293662.487016903 1.1208378879937937 1.4208250505722533 1.1793508050566937 1.2919704277819821 1.2725302428421947 1.2296868887899495 1.3163990945124737 1.070125654115375 1.5125282639774285 1.0 22.03377735869401 -10.267501143490646 3.8944064628008443 0.9996280189098979 1.2654015031083088 0.2927301547304222 0.1250188580094048 14483670.300207516 12907506.619286187 40281.99081323538 0.027127101291776097 5.401306926070123e-11 10.267501143490646 0.26577348419841085 NKDSGSDTASAIIPSTTPSVDS(ph)DDESVVKDK ddPTM_KYSE-520_SHP099_60min_R1 1 NKDSGSDTASAIIPSTTPSVDSDDESVVKDK 31 2 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPSTT(0.001)PS(0.03)VDS(0.955)DDES(0.014)VVKDK 120.99 0.00012034 2388200000.0 1551800.0 2047300.0 1450600.0 1517900.0 1572500.0 1361800.0 1421100.0 1204900.0 2249700.0 1154800.0 True False 1465718.5605633948 1948944.6349400515 1544107.9970420613 1662160.759626725 1696246.803698899 1353300.5010659392 1564758.656599456 1200720.4831257747 1841211.190321897 1144569.3704208042 1.2805851689221066 1.7027754588815498 1.349073316957945 1.4522149575046086 1.4819956286924478 1.1823665179580984 1.3671156131184674 1.049058723879992 1.6086497139487232 1.0 20.12637347418297 -6.252735016301532 24.008049176042498 1.2523591266231533 1.4613332007938349 0.23919224377939496 0.18817645267057742 546.2528301383354 1506653.759273855 0.05808325244850559 0.05717089478465937 5.588110479125651e-07 6.252735016301532 0.2089740741706816 NKDSGSDTASAIIPSTTPSVDSDDES(ph)VVK ddPTM_KYSE-520_SHP099_60min_R1 1 NKDSGSDTASAIIPSTTPSVDSDDESVVK 29 1 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 NKDSGSDTASAIIPS(0.005)T(0.005)T(0.001)PS(0.093)VDS(0.277)DDES(0.62)VVK 90.601 0.00089666 243440000.0 147020.0 208960.0 157610.0 146260.0 150820.0 161020.0 132110.0 137030.0 224160.0 135460.0 True False 138864.50752289605 198921.2479446453 167769.79278491627 160160.5064253276 162688.67595158535 160015.01445266383 145464.9680693508 136554.67491304257 183458.19461375134 134259.92978628536 1.034295993927155 1.4816129299433396 1.2495894571967365 1.1929136763312085 1.2117440863446958 1.191830017395178 1.0834577993665095 1.0170918093761108 1.3664404182676073 1.0 17.034669267479227 -6.047062884770658 1.199907417827186 1.1223478320414944 1.2676018504247033 0.1275533777574922 0.13894820125488427 0.8745258428771056 2.630540947641647 0.06214378053518577 0.06812909766787556 8.972988584304623e-07 6.047062884770658 0.14525401838320895 NKEDQYDHLDAADMTK ddPTM_KYSE-520_SHP099_60min_R1 2 NKEDQYDHLDAADMTK 16 1 P34932 P34932 HSPA4 Heat shock 70 kDa protein 4 0 ; 188.47 4.0616e-12 2276490000.0 3011500.0 2856590.0 1633930.0 1605830.0 2864590.0 2669090.0 2018230.0 2366410.0 2317380.0 2153810.0 False True 2844446.0917235883 2719355.128570992 1739255.7421804331 1758447.6003896038 3090016.9357124497 2652431.219261332 2222252.3844266576 2358201.4760342436 1896602.2083958534 2134728.919038824 1.332462434155021 1.2738643788998747 0.8147431398285196 0.8237334420809537 1.4474985128808537 1.2425143050273602 1.040999803116567 1.1046842786465083 0.888451077549374 1.0 21.025621448542942 -6.715342653123663 0.023136774586241107 2.171805926773128e-06 2.1782417252270547 0.08496802955048766 0.20092300203044916 1025.076094010045 13.746913555062545 620.3713471089068 669.2388352952063 1.9260047189999858e-07 6.715342653123663 2.178239553421128 NKEEAAEYAK ddPTM_KYSE-520_SHP099_60min_R1 4 NKEEAAEYAK 10 1 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 0 ;;; 151.13 0.00016223 9946000000.0 16270000.0 16047700.0 10497400.0 9716000.0 15914800.0 16435400.0 12215300.0 16649500.0 15976400.0 15460800.0 False True 15367470.666559108 15276744.403911224 11174079.200433845 10639405.71877809 17167204.21717471 16332820.572197925 13450141.733839527 16591746.770522516 13075488.49226952 15323829.340320403 1.0028479386757378 0.9969273387634716 0.7291962702189823 0.6943046338152206 1.12029466237946 1.065844588155432 0.8777271943670902 1.0827415525221193 0.8532781331533759 1.0 23.86927352805096 -5.772250894922993 24.99999813160509 1.0012985594741348 0.8568537013575476 0.2548507874176823 0.12074539157181668 325.4179058485529 752477.5436025695 0.03951514208812592 0.045243898090522545 1.6894646342708186e-06 5.772250894922993 -0.14444485811658725 NKEES(ph)S(ph)DDEDKES(ph)EEEPPKK ddPTM_KYSE-520_SHP099_60min_R1 2 NKEESSDDEDKESEEEPPKK 20 3 A0A494C198;B4DFG0;H0Y993;A0A494C028;P35659;P35659-2 A0A494C198 DEK Protein DEK 3 NKEES(1)S(1)DDEDKES(1)EEEPPKK;NKEES(1)S(1)DDEDKES(1)EEEPPKK 106.28 0.00020343 5922600000.0 2969410.0 2562490.0 2477910.0 2229350.0 2522280.0 2575880.0 2624740.0 2879600.0 3043400.0 2657850.0 True False 2804690.9079279215 2439384.134024092 2637640.043396179 2441226.7537214807 2720769.0861899224 2559802.977445827 2890074.3341938327 2869611.3397036954 2490795.277870675 2634303.516776007 1.0646802428295898 0.9260072419481612 1.0012665687909248 0.926706713245092 1.032822933600201 0.9717190753245633 1.097092387338438 1.0893244918169755 0.9455232709551386 1.0 21.328990147614444 -6.724669012836523 24.99999556527489 1.0404288917871731 0.9843823298525058 0.1287674869426887 0.05675995711891901 284.6712786183418 193546.07853737532 0.0209424406217774 0.0162214562322211 1.885085214825123e-07 6.724669012836523 -0.05604656193466728 NKEES(ph)S(ph)DDEDKESEEEPPKK ddPTM_KYSE-520_SHP099_60min_R1 2 NKEESSDDEDKESEEEPPKK 20 3 A0A494C198;B4DFG0;H0Y993;A0A494C028;P35659;P35659-2 A0A494C198 DEK Protein DEK 2 NKEES(1)S(0.999)DDEDKES(0.002)EEEPPKK;NKEES(1)S(1)DDEDKESEEEPPKK 125.05 9.0709e-05 4501700000.0 1332220.0 1223910.0 1034500.0 1163430.0 1204810.0 1163320.0 1308150.0 1422860.0 1443380.0 1336350.0 True False 1258319.1008852704 1165111.526473638 1101185.525258524 1274002.0374020154 1299621.6925688195 1156059.2883683555 1440390.5683136878 1417924.430758022 1181298.5766488072 1324510.9786645672 0.9500254215740556 0.8796541102651764 0.8313902587419773 0.9618659701005444 0.9812086977785248 0.8728197100592912 1.0874885837231456 1.0705267480588485 0.8918752624005024 1.0 20.337028371355064 -6.027446306553471 1.0572486111398 1.0060268388656284 0.8920888706135883 0.2566540713276454 0.06968411182968215 0.669046146179545 1.595592025475762 0.03537822868148807 0.04036981494248966 9.387580916618673e-07 6.027446306553471 -0.11393796825204006 NKEFER ddPTM_KYSE-520_SHP099_60min_R1 1 NKEFER 6 1 Q32MZ4-2;Q32MZ4;Q32MZ4-4;Q32MZ4-3 Q32MZ4-2;Q32MZ4-3 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 0 78.49600000000001 0.030264999999999997 389520000.0 331210.0 315750.0 201620.0 205950.0 315640.0 304340.0 237210.0 252140.0 287220.0 277570.0 False True 312837.12104923406 300580.8960495877 214616.74780340586 225523.42607887462 340479.0722540668 302440.5011708091 261189.50174650448 251265.38518991868 235068.08822698827 275110.9457461921 1.1371307681005423 1.0925806504510849 0.7801098106849005 0.8197544647566831 1.2376064184962712 1.099340123856178 0.9493969825085364 0.9133238392547546 0.8544483302523848 1.0 18.069654015252706 -6.984364972052286 21.26875063876422 0.9166036473874074 1.0199315983999289 0.11411956317618144 0.1345793217013012 103.04355504524074 140170.15280703243 0.06202673063392549 0.04178218651252007 1.0366568647787151e-07 6.984364972052286 0.10332795101252146 NKEIFLR ddPTM_KYSE-520_SHP099_60min_R1 2 NKEIFLR 7 1 P14625;Q96GW1;A0A1W2PRR1;F8W026 P14625 HSP90B1 Endoplasmin 0 ; 141.39 0.0017862000000000002 1087240000.0 2552300.0 2474300.0 1642520.0 1308860.0 2440200.0 2026550.0 1336270.0 1558890.0 2164060.0 1731450.0 False True 2410718.8311160887 2355430.913999983 1748399.4673249195 1433253.6608768904 2632229.8571612393 2013901.5497394453 1471353.2123384397 1553482.5744376625 1771121.2555131807 1716110.7000477172 1.4047571820681835 1.3725401944842424 1.018815084176274 0.8351755285000194 1.5338345347348799 1.173526596905111 0.8573766321120939 0.9052344784019278 1.0320553653467308 1.0 20.710711188163216 -1.0000000000000002 0.35043616158612484 0.9857273318338312 6.164290463592172 0.29802028300644035 0.19597909158937107 85.06786158329548 1.198656787626729 0.17913820223514057 291.16804501581794 0.09999999999999995 1.0000000000000002 5.178563131758341 NKELYEINPPEIS(ph)EEIIGSPIPEPR ddPTM_KYSE-520_SHP099_60min_R1 2 NKELYEINPPEISEEIIGSPIPEPR 25 1 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 NKELYEINPPEIS(0.501)EEIIGS(0.499)PIPEPR;NKELYEINPPEIS(0.644)EEIIGS(0.356)PIPEPR 101.94 0.00013529 76271000.0 144289.0 169351.0 141005.0 126551.0 132574.0 161096.0 122723.0 147544.0 242490.0 160376.0 True False 136285.00153700955 161215.12375896654 150094.40791597692 138578.3689910543 143006.81955712402 160090.54010847304 135129.03850105932 147032.20430102848 198459.9286754487 158955.19341064006 0.8573799862262756 1.0142174049166688 0.9442560805687396 0.8718077466840302 0.8996674879799901 1.0071425580597417 0.8501077291131409 0.9249915095330664 1.2485274901509715 1.0 17.27826062765618 -7.735847390145989 24.99252213663548 1.124263653493491 0.9231969517297004 0.525568776944392 0.07715546272498497 139.06151292939163 135804.807879312 0.048835186954778335 0.018442969783229485 1.8371838111349123e-08 7.735847390145989 -0.2010667017637907 NKELYEINPPEISEEIIGS(ph)PIPEPR ddPTM_KYSE-520_SHP099_60min_R1 5 NKELYEINPPEISEEIIGSPIPEPR 25 1 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 NKELYEINPPEISEEIIGS(1)PIPEPR;NKELYEINPPEISEEIIGS(1)PIPEPR;NKELYEINPPEISEEIIGS(1)PIPEPR;NKELYEINPPEIS(0.007)EEIIGS(0.993)PIPEPR;NKELYEINPPEISEEIIGS(1)PIPEPR 127.77 6.9383e-05 6226320000.0 1502810.0 1605950.0 1346790.0 1160860.0 1165950.0 1424250.0 1092020.0 1348320.0 1793180.0 1424160.0 True False 1419446.1335225354 1528797.7514199067 1433606.2383401897 1271187.785374714 1257703.631651975 1415360.7274512874 1202412.0386881565 1343642.992620254 1467583.7143892155 1411543.050379714 1.0055988962863693 1.0830684554811492 1.0156305455611436 0.9005660755672712 0.8910133001707916 1.002704612566047 0.8518422717356726 0.9518965732280043 1.039701703745009 1.0 20.42884169926105 -5.079949343611303 5.445957757907642 0.942499534084615 1.0457080168278319 0.33214941587030233 0.05669783425942173 0.2211790885465364 11.177395540291029 0.01536481338367001 0.027548377081791774 8.31860794224128e-06 5.079949343611303 0.10320848274321692 NKENLQPQSSGVQGQVPIS(ph)PEPLQRPEMLK ddPTM_KYSE-520_SHP099_60min_R1 3 NKENLQPQSSGVQGQVPISPEPLQRPEMLK 30 2 Q9H467 Q9H467 CUEDC2 CUE domain-containing protein 2 1 NKENLQPQS(0.003)S(0.005)GVQGQVPIS(0.992)PEPLQRPEMLK;NKENLQPQSSGVQGQVPIS(1)PEPLQRPEMLK;NKENLQPQSSGVQGQVPIS(1)PEPLQRPEMLK 245.41 2.2944e-31 2542350000.0 1492090.0 1539430.0 1116650.0 1121660.0 1187220.0 1613020.0 1274510.0 1650320.0 1753720.0 1537770.0 True False 1409320.7932923278 1465473.4720684611 1188631.0457031701 1228262.2291606236 1280647.4596422303 1602952.5438606103 1403349.9088189246 1644595.4251075832 1435288.6556835638 1524146.5541669556 0.9246622573395591 0.9615043042035002 0.7798666358254726 0.8058688488994735 0.8402390545325129 1.0517049948236292 0.9207447308673973 1.0790270926449461 0.9416998987135077 1.0 20.53957020102969 -6.252972188499094 24.947378877230044 0.9987063740904627 0.860203499752851 0.5198774048652028 0.06543037217842762 523.5284926566795 1542504.0251725437 0.02255470730800752 0.022207716059365116 5.585059593903159e-07 6.252972188499094 -0.13850287433761166 NKEVYMT(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 1 NKEVYMTPLR 10 1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 NKEVYMT(1)PLR 83.499 0.017272 191220000.0 467290.0 497220.0 453750.0 450890.0 376470.0 409450.0 350830.0 390990.0 507440.0 437030.0 True False 441368.4921804795 473332.80485756445 482999.4510256698 493742.45003497857 406096.0471787119 406894.4706722341 386295.3201708452 389633.74694775185 415301.68752142164 433158.25420419546 1.0189543611292091 1.0927479743568047 1.1150646359332188 1.139866192650742 0.93752351071965 0.939366771204179 0.8918110561705732 0.8995182318840779 0.95877588269539 1.0 18.724534683785024 -5.7732858424957065 24.967730335977546 0.9305840801116092 1.0934080012549154 0.7751490206418304 0.04047002644470657 95.079453998239 200389.90122563034 0.01273861618634163 0.014557427534680624 1.6854433407597836e-06 5.7732858424957065 0.16282392114330624 NKFEEAER ddPTM_KYSE-520_SHP099_60min_R1 8 NKFEEAER 8 1 K7ELL7;P14314-2;P14314;A0A0C4DGP4 K7ELL7 PRKCSH Glucosidase 2 subunit beta 0 ;;;;;;; 147.4 0.00052002 18026800000.0 17187500.0 16864800.0 12958380.0 9266070.0 15753500.0 16625800.0 11584690.0 12503100.0 13190900.0 13173500.0 False True 16234075.112568209 16054589.693419112 13793697.908941073 10146714.506854476 16993210.82484616 16522032.215172628 12755783.520879027 12459729.66434549 10795765.075528791 13056793.038827922 1.2433432209802036 1.2295967046177745 1.0564384277151184 0.7771214935153268 1.3014842752207398 1.2653974192621325 0.9769461369990501 0.9542718205989096 0.8268312933677244 1.0 23.63829725519043 -6.931614629514801 7.179846980606373 0.9270915602828071 1.135459179584174 0.32330807247404725 0.14689081640708493 0.30087344305160857 26.146988709527047 0.06685564526216353 0.044863257582298886 1.1705376049172538e-07 6.931614629514801 0.20836761930136682 NKFGS(ph)ADNIAHLK ddPTM_KYSE-520_SHP099_60min_R1 2 NKFGSADNIAHLK 13 1 G3V207;A0A0C4DFR1;O75069-3;Q9ULS5;O75069-5;O75069-2;O75069 G3V207 TMCC3;TMCC2 Transmembrane and coiled-coil domains protein 2;Transmembrane and coiled-coil domains protein 3 1 NKFGS(1)ADNIAHLK;NKFGS(1)ADNIAHLK 103.88 0.00059756 1334060000.0 837760.0 951730.0 713630.0 917270.0 840290.0 840320.0 708930.0 953900.0 1398730.0 737240.0 True False 791287.7827668437 906007.4622241451 759631.7316483716 1004447.0650127188 906416.0424039089 835075.2511791222 780595.5628900526 950591.143541933 1144755.8911139031 730708.6271640408 1.0829046672651412 1.23990251181303 1.0395822676907271 1.3746205090134032 1.24046166790422 1.1428293305091246 1.0682719949805826 1.3009168199248995 1.5666379847694212 1.0 19.478936715163293 -7.497970687772959 23.222553542055074 1.3334716352060028 1.1775822426215106 0.08876668398580634 0.15918414684145415 520.184850214912 484989.52853287413 0.08352282138141419 0.03975772919671356 3.177088497497333e-08 7.497970687772959 -0.1558893925844922 NKFGS(ph)ADNIPNLK ddPTM_KYSE-520_SHP099_60min_R1 1 NKFGSADNIPNLK 13 1 Q6N039;E9PC87;O94876-2;O94876 Q6N039 DKFZp686H13261;TMCC1 Transmembrane and coiled-coil domains protein 1 1 NKFGS(1)ADNIPNLK 117.0 7.9089e-05 563600000.0 383100.0 467270.0 363270.0 480330.0 404020.0 439250.0 362670.0 440170.0 665640.0 344720.0 True False 361848.6793090837 444821.6478134308 386686.9654525504 525980.4187835192 435814.0754406542 436508.47781848593 399332.22291810904 438643.15300645045 544776.5554188853 341666.04898810136 1.0590712199258792 1.3019193716520598 1.131768774210331 1.539457667337139 1.2755556975338558 1.2775880984115209 1.1687793507748143 1.2838359395250487 1.594470849627372 1.0 18.382227370170007 -3.500913594663688 1.3027137079320499 1.3005678028914573 1.4701568336010151e-08 0.13549227349486892 0.16774270893548326 16.9031012152559 5.8164201833177716 0.04668117718016637 47.32353741429348 0.00031556323917835766 3.500913594663688 -1.300567788189889 NKGNECFQK ddPTM_KYSE-520_SHP099_60min_R1 2 NKGNECFQK 9 1 P31948;P31948-2;P31948-3 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ; 117.52 0.00088906 2619600000.0 4221400.0 4472000.0 3107300.0 2699200.0 4281100.0 4281800.0 3210500.0 3722200.0 4071100.0 3425900.0 False True 3987230.52684773 4257158.407391146 3307601.5298557826 2955731.1564559313 4617998.213873044 4255075.697946938 3535048.6714605284 3709288.556968014 3331890.8640794232 3395549.1913098698 1.1742520288182345 1.253746645251486 0.974099134926636 0.8704721946071192 1.3600151120448356 1.2531332807184268 1.0410830390876609 1.0923972376725062 0.9812524208474537 1.0 21.69521350211577 -7.4392710314324555 1.7849538649594836 0.9948405411886063 1.1372471298400908 0.14650377925546265 0.13589466530890146 0.8465697402321917 4.825673362898497 0.12432764294393807 0.04272199759854401 3.6368799745383294e-08 7.4392710314324555 0.14240658865148448 NKHEAMITDLEER ddPTM_KYSE-520_SHP099_60min_R1 8 NKHEAMITDLEER 13 1 P35579 P35579 MYH9 Myosin-9 0 ;;;;;;; 234.69 9.800700000000002e-16 12501680000.0 17608790.0 15131150.0 10706560.0 10262100.0 16611850.0 15010640.0 11572710.0 13511820.0 13060760.0 12094290.0 False True 16631995.316447398 14404226.841680806 11396721.988701679 11237406.898587124 17919108.086502716 14916953.027845802 12742592.465565471 13464950.65010251 10689255.218966354 11987143.99981524 1.3874860698014264 1.2016395933762722 0.9507453976424525 0.9374549015812548 1.4948605011151035 1.2444125997047937 1.0630215559070513 1.1232826309844985 0.8917266046967575 1.0 23.51498463421385 -7.431048040441172 1.7818915344442783 0.9555286859043708 1.1856214217247865 0.23204869221796287 0.1674344722225557 0.6396387921380132 3.634623231082717 0.15108429260119785 0.05221009714386909 3.706397203854375e-08 7.431048040441172 0.23009273582041567 NKHPDEDAVEAEGHEVK ddPTM_KYSE-520_SHP099_60min_R1 2 NKHPDEDAVEAEGHEVK 17 1 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559;C9IZ04 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 0 ; 141.22 4.1561000000000004e-05 141835000.0 315680.0 250710.0 188289.0 194413.0 279340.0 287610.0 243540.0 296100.0 244641.0 219137.0 False True 298168.60110752145 238665.51527661763 200426.41021305163 212889.95306760017 301322.46877281414 285814.91930648766 268159.3999213506 295072.8982102592 200220.36129774578 217195.6166660063 1.3728113195121787 1.0988505152183932 0.9227921506411356 0.9801761027018 1.3873321819204774 1.3159331836148473 1.2346446214598985 1.3585582560996574 0.9218434716646962 1.0 17.728635462118557 -4.252432490948977 23.59458275195563 1.1518696242343844 1.3728115726578993 0.14156236761470953 0.1710771644128327 1243.4763385097388 3257271.4445225094 0.045248552093048025 0.5103982932068265 5.592004459152426e-05 4.252432490948977 0.2209419484235149 NKHPDEDAVEAEGHEVKR ddPTM_KYSE-520_SHP099_60min_R1 3 NKHPDEDAVEAEGHEVKR 18 2 Q9NY27-2;Q9NY27-3;Q9NY27;H7C559;C9IZ04 Q9NY27-2 PPP4R2 Serine/threonine-protein phosphatase 4 regulatory subunit 2 0 ;; 157.42 2.4479e-07 1643110000.0 859310.0 832510.0 710480.0 626116.0 739940.0 814140.0 633340.0 750760.0 865460.0 551336.0 False True 811642.3613079849 792514.9699770148 756278.6776081938 685621.87639136 798169.068317305 809058.6502701 697364.1880027449 748155.7887887015 708314.2804711693 546451.5919729178 1.4852959955292984 1.4502930938780978 1.3839811041225316 1.254679987143929 1.4606400274827314 1.4805678346531326 1.2761682795816731 1.3691163129153812 1.2962068202855075 1.0 19.059734173236354 -12.711046217324721 0.20144401499151418 8.426505443689944e-19 1.4548510017077536 0.7443578990763723 0.07131053662202674 41.81470705916218 0.6609070154933312 17.243736767759756 0.18472552462856923 1.9451530687351799e-13 12.711046217324721 1.4548510017077536 NKKS(ph)PEIHR ddPTM_KYSE-520_SHP099_60min_R1 10 NKKSPEIHR 9 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR;NKKS(1)PEIHR 132.06 0.00033826 238601819000.0 33229320.0 29217230.0 27854100.0 26227320.0 28932370.0 27624570.0 25797220.0 26256430.0 34054390.0 20118591.0 True False 31386023.378592826 27813590.414843645 29649619.854135744 28719956.607268717 31209182.916333202 27452154.81181605 28405054.75420497 26165352.572626825 27870971.21731165 19940355.935766943 1.5739951422981289 1.3948392147280837 1.4869152762189832 1.4402930770033968 1.5651266716033592 1.3767133796531297 1.4245008888359374 1.312180818482489 1.3977168365043873 1.0 24.249187826313882 -11.282570007121018 0.21839528984027004 0.3964599397674298 1.5246695653274744 0.8350073494350596 0.06233819505205445 13.812709731393836 0.39898980002705886 4.192825440739381 0.12929110845268404 5.217109990282057e-12 11.282570007121018 1.1282096255600447 NKKS(ph)PEIHRR ddPTM_KYSE-520_SHP099_60min_R1 2 NKKSPEIHRR 10 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 NKKS(1)PEIHRR;NKKS(1)PEIHRR 115.37 0.00037369 266470000.0 674250.0 601150.0 330240.0 638990.0 345340.0 533040.0 396570.0 547810.0 434070.0 126407.0 True False 636848.0084159472 572269.8516554533 351527.7988026821 699719.4174806506 372516.29328418267 529713.0996388514 436659.16575022595 545909.7749698149 355253.83001423563 125287.13232315793 5.083107870753244 4.567666615430032 2.8057773554587624 5.584926436625889 2.9733005008314586 4.227992849836661 3.4852674624552353 4.357269296911744 2.835517290777442 1.0 16.934878723997986 -9.436082182899062 0.31590975142591526 1.179112094029705e-16 4.436065433040264 0.5743012906900746 0.8340239402920719 6.033029254281954 0.6748946578172763 7.702228052097288 0.8488712064966939 3.6636823908342744e-10 9.436082182899062 4.436065433040264 NKKSPEIHR ddPTM_KYSE-520_SHP099_60min_R1 2 NKKSPEIHR 9 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ; 64.73 0.019825 2569700000.0 2745100.0 2442900.0 2215710.0 2091170.0 2207020.0 2131360.0 2406100.0 2249740.0 2839000.0 1637060.0 False True 2592823.8307788186 2325539.417132343 2358538.2118613464 2289914.168066815 2380699.9177739522 2118057.391652152 2649332.0692730686 2241936.177033263 2323509.165365987 1622556.9220134087 1.597986360664265 1.433255983553793 1.4535935102570507 1.4112997436325943 1.4672520177719093 1.305382487921523 1.6328130208125755 1.3817303705137658 1.4320047166559655 1.0 20.62983766059387 -11.84498417872679 0.3928762139851072 2.040504239648013e-11 1.466590386477742 0.7018313976418431 0.0898925269577814 54.93150394549289 1.969982967344435 46.01776563963012 0.05642797051197844 1.4289460138201982e-12 11.84498417872679 1.466590386457337 NKLEGDS(ph)DVDS(ph)ELEDRVDGVK ddPTM_KYSE-520_SHP099_60min_R1 4 NKLEGDSDVDSELEDRVDGVK 21 2 Q92614;Q92614-2 Q92614 MYO18A Unconventional myosin-XVIIIa 2 NKLEGDS(1)DVDS(1)ELEDRVDGVK;NKLEGDS(1)DVDS(1)ELEDRVDGVK;NKLEGDS(1)DVDS(1)ELEDRVDGVK;NKLEGDS(1)DVDS(1)ELEDRVDGVK 133.44 4.8662e-06 2256360000.0 2367860.0 2027760.0 1903600.0 1832840.0 2024080.0 1811140.0 1755880.0 1961740.0 2587540.0 1916290.0 True False 2236510.0855881125 1930343.3658701894 2026309.1018676877 2007032.5625365623 2183363.580560171 1799836.0034517276 1933381.4861373955 1954935.181813557 2117707.962575243 1899313.1614510606 1.1775362436173695 1.0163375924775997 1.0668641396238223 1.0567149237270619 1.149554283555903 0.9476246676860106 1.0179371813863003 1.0292853340309618 1.1149861989885492 1.0 20.85704636803116 -6.2546511501545545 24.999870723778983 1.0235451663349944 1.085607674012427 0.2721766302593863 0.057678982129718656 877.5655293075906 3231925.2092431146 0.01919705265738319 0.01876041998024736 5.563509703413193e-07 6.2546511501545545 0.0620625076774326 NKLEGDS(ph)DVDSELEDRVDGVK ddPTM_KYSE-520_SHP099_60min_R1 1 NKLEGDSDVDSELEDRVDGVK 21 2 Q92614;Q92614-2 Q92614 MYO18A Unconventional myosin-XVIIIa 1 NKLEGDS(1)DVDSELEDRVDGVK 138.78 1.1615e-06 259750000.0 253300.0 216950.0 221060.0 185100.0 199800.0 210550.0 195480.0 229420.0 346820.0 214070.0 True False 239248.94405896845 206527.39635141107 235309.88130850592 202691.8483476555 215523.1232935071 209235.87935044314 215241.0261009512 228624.19556703037 283846.23062072246 212173.50634393992 1.1276098895737643 0.9733891846827646 1.1090445992208906 0.955311772145037 1.015787159326751 0.9861546003357516 1.0144576003378984 1.0775341347115381 1.3378024217623044 1.0 17.694884995663664 -7.534597983354624 24.834332764337066 1.181823636294866 1.0241765408402257 0.2739462741830885 0.09177280675369809 228.00079943783683 483146.5041597884 0.056306286013830635 0.021317602876155233 2.9201288609739748e-08 7.534597983354624 -0.15764709545464028 NKNSDGGS(ph)DPETQK ddPTM_KYSE-520_SHP099_60min_R1 1 NKNSDGGSDPETQK 14 1 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NKNS(0.005)DGGS(0.995)DPETQK 89.26100000000001 0.0030886999999999998 0.0 541390.0 501860.0 431480.0 356780.0 428740.0 384920.0 300920.0 310090.0 596740.0 426240.0 True False 511358.0174657917 477749.89229278284 459293.89119241 390688.2639301812 462479.3988030945 382517.57150117616 331339.9302961848 309014.37016555003 488387.058591229 422463.8452097016 1.2104184139401681 1.1308657479449833 1.0871791666915942 0.9247850871978223 1.0947194749257894 0.9054445151662693 0.7843036369933977 0.7314575523312822 1.1560446275557725 1.0 18.688468354130887 -4.962060908026451 0.7658762706014529 0.9030382199246237 1.252811175704021 0.3780015917985322 0.12102868161229782 1.2453505106857736 1.0416657652997594 0.055337081797895794 0.3189755277037579 1.0912872771346915e-05 4.962060908026451 0.34977295577939727 NKNSDGGS(ph)DPETQKEK ddPTM_KYSE-520_SHP099_60min_R1 1 NKNSDGGSDPETQKEK 16 2 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NKNS(0.025)DGGS(0.975)DPETQKEK 80.975 0.004233 0.0 187030.0 232010.0 235560.0 128800.0 158470.0 140060.0 86560.0 92399.0 291790.0 139490.0 True False 176655.07306493854 220863.89134589027 250744.57450932622 141041.1132748679 170940.68742903927 139185.8335873808 95310.32954419054 92078.48943508873 238808.29142731288 138254.227121578 1.277755311666468 1.5975199886775757 1.8136485207705544 1.020157692182816 1.236422863792204 1.0067383579164169 0.6893845600856495 0.666008492847866 1.727312765759485 1.0 17.07696406595724 -5.279038426140529 23.680754636084625 1.0265261114194049 1.566429117595179 0.3728424873292632 0.304195402044803 405.6291247427798 545801.6816197849 0.0868414404012252 0.12920260424295413 5.259707267268187e-06 5.279038426140529 0.5399030061757741 NKPEWFFK ddPTM_KYSE-520_SHP099_60min_R1 3 NKPEWFFK 8 1 Q5TA02;P78417-3;P78417;Q5TA01;P78417-2 Q5TA02 GSTO1 Glutathione S-transferase omega-1 0 ;; 142.92 0.00062249 6009280000.0 3885550.0 3126860.0 2153440.0 1817860.0 3255000.0 3227280.0 2449520.0 2392060.0 2445630.0 2517160.0 False True 3670010.7958481098 2976640.952087454 2292254.188025825 1990628.867840462 3511149.9815834085 3207137.348421265 2697141.386611432 2383762.5021710023 2001565.2413152608 2494859.9207208483 1.4710288002012237 1.1931094517031655 0.9187907381042526 0.7978920384697602 1.4073535561743764 1.2854979639476576 1.081079287943404 0.9554694764114267 0.8022756006024345 1.0 21.250527383942945 -4.3801143274660115 3.2431532767866416 1.0456765314489684 1.4842245880715979 0.3460468793604685 0.18412820728493448 0.35145861245698784 5.976189055122485 0.05154055770565455 0.32027318971040014 4.167596575823975e-05 4.3801143274660115 0.4385480566226294 NKPGPNIES(ph)GNEDDDASFK ddPTM_KYSE-520_SHP099_60min_R1 16 NKPGPNIESGNEDDDASFK 19 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK;NKPGPNIES(1)GNEDDDASFK 276.78 6.6006e-36 319175810000.0 26585097.0 23128891.0 23551668.0 22530944.0 22583250.0 21592544.0 21945155.0 24412410.0 26766960.0 22726707.0 True False 25110368.673333015 22017744.35918682 25069846.203281164 24672278.143584695 24360423.293884344 21457776.923548497 24163585.431473423 24327729.04760933 21906754.804151054 22525366.057090472 1.1147596274214084 0.9774644417934392 1.1129606568764172 1.0953108633641238 1.0814662559597445 0.952605026225271 1.0727277581296966 1.0800148146738557 0.972537127637724 1.0 24.425047215509306 NKPLS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 4 NKPLSPIK 8 1 P35251-2;P35251;A0A1W2PP02;D6RAD2 P35251-2 RFC1 Replication factor C subunit 1 1 NKPLS(1)PIK;NKPLS(1)PIK;NKPLS(1)PIK;NKPLS(1)PIK 99.75200000000001 0.0018088000000000002 22123160000.0 20858900.0 22024400.0 16147200.0 15668300.0 14312300.0 19018000.0 18476700.0 19597100.0 18877000.0 22514500.0 True False 19701815.235813756 20966314.764701623 17188074.348433495 17157410.52115382 15438596.584152462 18899301.607631072 20344505.15121467 19529122.234097518 15449412.65044514 22315039.04601592 0.8828940516387435 0.9395598511598798 0.7702462143574971 0.7688720815488364 0.6918471687330001 0.846931146688059 0.9116948040853613 0.8751551899069703 0.6923318672482202 1.0 24.411512995177027 -8.854208690936948 13.670600165111475 1.000006298946394 0.8218501053699498 0.2991790705294822 0.08262558825456982 0.0 0.0 0.0849725400708895 0.020608868117018037 1.3989149423412141e-09 8.854208690936948 -0.1781561935764442 NKPLS(ph)PIKLT(ph)PTSVLDYFGTGSVQR ddPTM_KYSE-520_SHP099_60min_R1 2 NKPLSPIKLTPTSVLDYFGTGSVQR 25 2 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 2 NKPLS(0.986)PIKLT(0.865)PT(0.122)S(0.027)VLDYFGTGSVQR;NKPLS(1)PIKLT(0.859)PT(0.14)S(0.001)VLDYFGTGSVQR 150.55 1.9563e-06 479770000.0 705600.0 793000.0 719750.0 724160.0 661770.0 634200.0 618660.0 696190.0 763400.0 548960.0 True False 666458.961421273 754903.0896827325 766146.236640718 792983.9486733567 713847.534043765 630241.7225554547 681200.1903397518 693775.0793819677 624785.8037479375 544096.6414844173 1.2248907833781586 1.3874430241348084 1.408106902756282 1.4574321696048687 1.3119866575471397 1.1583268017167214 1.251983817583004 1.275095316687113 1.148299320582796 1.0 19.05350339761728 -6.097638306450826 4.282184985597955 1.1901417389599755 1.3748652071066032 0.528619939578473 0.08997572718305598 0.2014135461524391 6.3755865756634895 0.030016577114158834 0.030448093596443498 7.986595581465064e-07 6.097638306450826 0.18472346814662766 NKPLS(ph)PIKLTPTSVLDYFGTGSVQR ddPTM_KYSE-520_SHP099_60min_R1 2 NKPLSPIKLTPTSVLDYFGTGSVQR 25 2 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 NKPLS(0.96)PIKLT(0.035)PT(0.005)SVLDYFGTGSVQR;NKPLS(0.999)PIKLTPT(0.001)SVLDYFGTGSVQR 227.77 5.692899999999999e-22 933210000.0 543240.0 1003180.0 798460.0 464850.0 483160.0 615030.0 342610.0 451550.0 686250.0 373330.0 True False 513105.3942779082 954985.7269961208 849930.0091811703 509029.20423775155 521181.94319564966 611191.3696362046 377244.362351376 449983.67844256177 561644.2989547055 370022.5866463452 1.3866866856112126 2.5808849552983184 2.2969679145384276 1.3756706282480644 1.4085138637598287 1.6517677344393036 1.0195171212938228 1.2160978672165237 1.5178649066942114 1.0 18.497253811794934 -5.272016285317436 21.523713622829852 1.3276743813212382 2.1374503371714026 0.521468683203991 0.33919825240557255 78.14544414795476 159024.53354947842 0.09345087270914904 0.14085091471668734 5.3454431450249144e-06 5.272016285317436 0.8097759558501645 NKPPPPPPASASPSAVPNGPQS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 NKPPPPPPASASPSAVPNGPQSPK 24 1 H0Y7W6 H0Y7W6 FNBP1 1 NKPPPPPPASASPSAVPNGPQS(1)PK;NKPPPPPPASASPSAVPNGPQS(1)PK 220.09 2.4945e-21 2592500000.0 4637400.0 4641400.0 3598100.0 2958100.0 3223600.0 4786500.0 3643100.0 4707600.0 5681400.0 4942200.0 True False 4380154.177572295 4418420.177116567 3830039.28316355 3239236.934614802 3477278.980224973 4756625.678037981 4011380.101229671 4691270.434362098 4649800.976439007 4898415.952973414 0.8941980876314666 0.902010000689002 0.7818934365585383 0.6612825382149377 0.7098782572995278 0.9710538516335337 0.8189137345093573 0.9577117336298123 0.9492458421413774 1.0 22.22388385605019 -7.083465208787197 1.11145083054909 0.9826210136058859 0.8000564239057892 0.3989289104481707 0.08562640439357631 0.5942517044947404 1.3405809250443468 0.07705810399078504 0.03368910689589232 8.251535856604174e-08 7.083465208787197 -0.1825645897000967 NKPRPPPLSPLGGPVPSALPNGPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 NKPRPPPLSPLGGPVPSALPNGPPSPR 27 2 Q15642 Q15642 TRIP10 Cdc42-interacting protein 4 1 NKPRPPPLSPLGGPVPSALPNGPPS(1)PR;NKPRPPPLSPLGGPVPSALPNGPPS(1)PR;NKPRPPPLSPLGGPVPSALPNGPPS(1)PR;NKPRPPPLSPLGGPVPSALPNGPPS(1)PR 132.34 2.4113e-05 5535580000.0 4140530.0 3726540.0 3579640.0 3552500.0 3475850.0 3448620.0 3024750.0 3361750.0 4318860.0 2907930.0 True False 3910846.5469580744 3547511.4247494237 3810389.3220265037 3890128.531901931 3749379.620118802 3427095.8833793662 3330521.24871523 3350088.873888347 3534663.893600756 2882168.0025353082 1.3569113748809527 1.230848243970804 1.322056631908578 1.3497230308850723 1.3008886424457728 1.1890687428230104 1.1555611073974612 1.1623503109261606 1.2263906512359715 1.0 21.45872300246359 -6.342958454594935 2.859489534082377 1.1507994566716622 1.3118609641679937 0.6428903209987495 0.062287504388609125 0.18861844670532008 3.0147848077313117 0.02294495635659428 0.020196723094210254 4.539850436132578e-07 6.342958454594935 0.16106150749633152 NKPRS(ph)PVVELSK ddPTM_KYSE-520_SHP099_60min_R1 2 NKPRSPVVELSK 12 2 P25098 P25098 ADRBK1 Beta-adrenergic receptor kinase 1 1 NKPRS(0.995)PVVELS(0.005)K;NKPRS(1)PVVELSK 140.49 2.6722e-05 3328100000.0 2204940.0 1817740.0 2009110.0 1646150.0 1723220.0 1707170.0 1629840.0 1744530.0 2282510.0 1844850.0 True False 2082627.5827610819 1730413.0419166363 2138620.4452896607 1802599.6010669535 1858827.610219404 1696514.9187874417 1794600.1329055363 1738478.6326063627 1868063.721394688 1828506.0642715832 1.1389776733339587 0.9463534607450023 1.1695998646532337 0.985831896480502 1.01658268820667 0.9278147619725163 0.9814570309453395 0.9507644883304861 1.0216338670656053 1.0 20.802233980734126 -5.476373037867267 24.96979936965683 0.9798731190343576 1.072214909415056 0.3642657006541038 0.06069492400117568 452.70696104635226 243066.53369581187 0.01598016894927407 0.02370157962101263 3.3390810596667127e-06 5.476373037867267 0.09234179038069834 NKQDDDLNCEPLS(ph)PHNITPEPVSK ddPTM_KYSE-520_SHP099_60min_R1 11 NKQDDDLNCEPLSPHNITPEPVSK 24 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73;F8WE35;F5H8I0;F5H2W9;F5H2H9;F5GZ10;F5H502;F5H1K9 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(0.91)PHNIT(0.09)PEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK;NKQDDDLNCEPLS(1)PHNITPEPVSK 277.69 2.0718999999999998e-38 32681970000.0 16925140.0 14390450.0 14333840.0 13656920.0 15667930.0 15172900.0 14152480.0 15355940.0 19217700.0 14160190.0 True False 15986268.744769903 13699111.181494184 15257822.261354908 14954869.570697263 16900906.952672858 15078200.30299853 15583150.793294426 15302673.828243345 15728250.118793217 14034741.733061124 1.1390497273713016 0.9760857336778554 1.0871466359379183 1.065560724603049 1.204219306213524 1.0743482559055126 1.1103268652664817 1.0903423888588843 1.1206654470700204 1.0 23.742499179871007 -5.562209797849626 24.99997193156571 1.106568364932161 1.061302805235192 0.05817432274642609 0.060316856098699835 337.06917417389764 214249.21906282046 0.016822158112444644 0.02171736405561748 2.7402500992425565e-06 5.562209797849626 -0.04526555969696888 NKQPT(ph)PVNIR ddPTM_KYSE-520_SHP099_60min_R1 6 NKQPTPVNIR 10 1 A0A087X1B7;X6R700;Q9Y3Y2-4;Q9Y3Y2;Q9Y3Y2-3 A0A087X1B7 CHTOP Chromatin target of PRMT1 protein 1 NKQPT(1)PVNIR;NKQPT(1)PVNIR;NKQPT(1)PVNIR;NKQPT(1)PVNIR;NKQPT(1)PVNIR;NKQPT(1)PVNIR 173.72 9.3934e-05 13530650000.0 11547200.0 11341870.0 8954730.0 7478000.0 7642160.0 10768610.0 8345150.0 10223820.0 11721520.0 10937720.0 True False 10906653.797227483 10796989.54070605 9531966.223874582 8188706.871657313 8243554.514057598 10701399.11057695 9188759.20281539 10188355.95467752 9593187.443473315 10840820.310217394 1.006072740357853 0.9959568770390896 0.8792661395642518 0.7553586017784574 0.7604179645232297 0.987139238945872 0.847607371017399 0.9398141158261861 0.8849134261944925 1.0 23.369970591817175 -9.489315580415688 17.235862357688887 0.9999999694997174 0.8922117569033533 0.11802998702910805 0.08562323316975334 0.0 0.0 0.08954112028024348 0.02171691157362233 3.241040213280239e-10 9.489315580415688 -0.10778821259636406 NKS(ph)HENCNQNMHEPFPMSK ddPTM_KYSE-520_SHP099_60min_R1 3 NKSHENCNQNMHEPFPMSK 19 1 A0A087WZ06;Q13188;Q13188-2 A0A087WZ06 STK3 Serine/threonine-protein kinase 3;Serine/threonine-protein kinase 3 36kDa subunit;Serine/threonine-protein kinase 3 20kDa subunit 1 NKS(1)HENCNQNMHEPFPMSK;NKS(1)HENCNQNMHEPFPMSK;NKS(1)HENCNQNMHEPFPMSK 150.09 8.934200000000001e-07 4320130000.0 2820230.0 2648510.0 2440780.0 3061560.0 2725020.0 2514110.0 2431930.0 2598450.0 3129950.0 2092410.0 True False 2663786.21991088 2521271.6041054414 2598116.5841860776 3352529.74190842 2939463.5707571246 2498418.5069282483 2677773.2177495705 2589436.58343279 2561629.9796186257 2073872.8752703448 1.2844500989790109 1.2157310287289305 1.252784881449107 1.6165550848778003 1.4173788595281875 1.2047115021949264 1.2911944843294711 1.2485994750740146 1.2351914189941358 1.0 20.98389603153797 -8.303986202532387 0.6660360754923853 0.9974595263260803 1.339950552186911 0.4368534266361066 0.11234157528107835 1.2541419803609346 1.119529455376192 0.13344118288655912 0.04951219470124252 4.966080983611593e-09 8.303986202532387 0.3424910258608308 NKS(ph)NEDQSMGNWQIK ddPTM_KYSE-520_SHP099_60min_R1 10 NKSNEDQSMGNWQIK 15 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 NKS(1)NEDQSMGNWQIK;NKS(1)NEDQSMGNWQIK;NKS(1)NEDQSMGNWQIK;NKS(1)NEDQSMGNWQIK;NKS(1)NEDQSMGNWQIK;NKS(1)NEDQSMGNWQIK;NKS(0.774)NEDQS(0.226)MGNWQIK;NKS(1)NEDQSMGNWQIK;NKS(1)NEDQSMGNWQIK;NKS(1)NEDQSMGNWQIK 289.76 2.8128000000000002e-33 14197650000.0 11952980.0 10153770.0 10116470.0 9701130.0 10173280.0 10588900.0 9903900.0 10180580.0 12778900.0 10498180.0 True False 11289924.371725123 9665967.64808052 10768593.843124308 10623122.4784489 10973859.257954817 10522810.747346986 10905082.864749387 10145265.944145247 10458573.88985396 10405174.292660454 1.0850298182596279 0.928957783523016 1.0349268104735354 1.0209461350341993 1.0546540547327015 1.011305572725438 1.0480442285759264 0.9750212402786429 1.005132023327199 1.0 23.310797795459788 -7.270087534123448 24.557888678304984 0.992557475963043 1.0231685989839623 0.1271060545269601 0.038881327567379866 1152.0584739979108 3271446.1187874717 0.020046041988925182 0.00984904774703925 5.369235659587893e-08 7.270087534123448 0.030611123020919284 NKS(ph)PAAVTEPETNK ddPTM_KYSE-520_SHP099_60min_R1 1 NKSPAAVTEPETNK 14 1 B7ZBC9;B7ZBC8;O75449 B7ZBC9 KATNA1 Katanin p60 ATPase-containing subunit A1 1 NKS(1)PAAVTEPETNK 141.22 3.6842000000000002e-06 528960000.0 575530.0 462260.0 467200.0 526390.0 522520.0 537610.0 494740.0 573400.0 636520.0 612140.0 True False 543604.203609389 440052.3357335937 497316.4595464306 576417.9473350758 563639.3512678843 534254.5765736958 544753.1473970979 571411.0092325659 520944.0133634227 606716.9158377128 0.895976672842256 0.7253009175226305 0.8196845127678208 0.9500607817060741 0.9289989063345134 0.8805664761069566 0.897870379376089 0.9418082705731075 0.8586278044417786 1.0 19.210664010061752 -1.0000000000932423 0.11389364178712853 1.0215306464364284 0.3639089450839279 0.34246419090462576 0.059118587977725616 116.70083208687981 0.9243516774297216 0.506214258980759 12.102757440593047 0.09999999997853017 1.0000000000932423 -0.6576217013525005 NKS(ph)PAAVTEPETNKFDSTGYDK ddPTM_KYSE-520_SHP099_60min_R1 1 NKSPAAVTEPETNKFDSTGYDK 22 2 B7ZBC9;B7ZBC8;O75449 B7ZBC9 KATNA1 Katanin p60 ATPase-containing subunit A1 1 NKS(1)PAAVTEPETNKFDSTGYDK 95.794 0.0012499 590560000.0 248960.0 190260.0 188240.0 224300.0 218780.0 191280.0 226760.0 233530.0 190600.0 211120.0 True False 235149.69251054418 181119.62401391755 200374.25159464907 245617.40456174593 235996.74131207934 190086.1505682866 249683.11376433232 232719.93893631184 155991.84463499748 209249.6410488746 1.1237758465526835 0.8655671909688644 0.9575846849259231 1.1738008406159077 1.1278238764431496 0.9084180484872996 1.1932307865035412 1.1121641010698569 0.7454820178093513 1.0 17.674865622385894 -7.747521488402347 24.999909446767408 0.8727409384175762 1.0537840596817796 0.27263220249483655 0.12076396528173484 276.2283909053899 496178.7950686945 0.0832853189617767 0.03112746140218591 1.7884570360765407e-08 7.747521488402347 0.1810431212642034 NKS(ph)PAAVTEPETNKFDSTGYDKDLVEALER ddPTM_KYSE-520_SHP099_60min_R1 5 NKSPAAVTEPETNKFDSTGYDKDLVEALER 30 3 B7ZBC9;B7ZBC8;O75449 B7ZBC9 KATNA1 Katanin p60 ATPase-containing subunit A1 1 NKS(1)PAAVTEPETNKFDSTGYDKDLVEALER;NKS(1)PAAVTEPETNKFDSTGYDKDLVEALER;NKS(1)PAAVTEPETNKFDSTGYDKDLVEALER;NKS(0.994)PAAVT(0.005)EPET(0.001)NKFDSTGYDKDLVEALER;NKS(1)PAAVTEPETNKFDSTGYDKDLVEALER 188.2 1.7297999999999998e-15 6709130000.0 1218620.0 1189624.0 1081919.0 1009520.0 1011700.0 1016438.0 988454.0 986400.0 1301060.0 944423.0 True False 1151020.7193412557 1132472.6773779728 1151661.2298716055 1105464.4772767432 1091315.0342144214 1010094.0334134683 1088376.5767014003 982978.4086274913 1064820.3010535645 936056.146969975 1.2296492289133762 1.2098341333944556 1.230333493989166 1.1809809495457564 1.1658649299478683 1.079095561396776 1.1627257405706788 1.0501276144699272 1.1375602889852288 1.0 19.836235543268693 -5.202948820396556 0.14319998519570767 0.9409632429243276 1.440725610587284 0.7827503864563853 0.034603989887348266 8.182096907440005 0.28903901026818235 0.22842513508688647 0.8613451626718011 6.266877125800546e-06 5.202948820396556 0.49976236766295645 NKS(ph)PPADPPR ddPTM_KYSE-520_SHP099_60min_R1 1 NKSPPADPPR 10 1 O60566-3;O60566;O60566-2 O60566-3 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 NKS(1)PPADPPR 47.711999999999996 0.058169000000000005 572780000.0 1531500.0 1218700.0 1204100.0 1318700.0 1374100.0 1409500.0 1321300.0 1483500.0 1689800.0 1323900.0 True False 1446544.6420304384 1160151.822694007 1281718.2126281196 1444028.8515183884 1482233.8524404815 1400702.7876725215 1454869.8986453183 1478354.0847515038 1382974.9163914914 1312171.2759786153 1.102405355544464 0.8841466384247496 0.9767918533898833 1.1004880825800991 1.1296039469657144 1.0674694785007237 1.1087499972595258 1.1266471929504398 1.053959145203869 1.0 20.323524614644132 -5.258774829059112 24.289442280442028 1.0913843418935365 0.9774178059895366 0.3308786265285143 0.061428092816224834 147.4505241257931 1344111.8555801364 0.015987738128424505 0.026166968265486312 5.5109335061044496e-06 5.258774829059112 -0.11396653590399985 NKS(ph)TESLQANVQR ddPTM_KYSE-520_SHP099_60min_R1 3 NKSTESLQANVQR 13 1 P26373;J3QSB4 P26373 RPL13 60S ribosomal protein L13 1 NKS(0.903)T(0.095)ES(0.003)LQANVQR;NKS(0.861)T(0.109)ES(0.03)LQANVQR;NKS(0.842)T(0.141)ES(0.016)LQANVQR 206.19 3.3989000000000003e-09 2166780000.0 1630720.0 1487370.0 1445580.0 1400470.0 1393660.0 1528990.0 1372030.0 1523860.0 1807260.0 1462050.0 True False 1540260.7108402746 1415914.5126121128 1538764.399809779 1533570.24773334 1503333.1131593063 1519447.006259957 1510728.1821224068 1518574.0853315983 1479107.1413171322 1449097.3744576892 1.0629104282358544 0.9771010130647744 1.0618778468118104 1.0582934416724505 1.0374272562062397 1.0485472081050422 1.0425304805260462 1.0479448186840516 1.0207092824736321 1.0 20.466723111718785 -3.91748464220873 21.8640244924263 1.035880191044049 2.7846947010303587 0.10097304136775187 0.025501757923479723 3358.300201295725 778573.3321988115 0.00597138120740461 36401.8271548902 0.00012092479443641669 3.91748464220873 1.7488145099863097 NKSEDS(ph)TKDDIDLDALAAEIEGAGAAK ddPTM_KYSE-520_SHP099_60min_R1 1 NKSEDSTKDDIDLDALAAEIEGAGAAK 27 2 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 NKS(0.017)EDS(0.491)T(0.491)KDDIDLDALAAEIEGAGAAK 128.04 9.690000000000001e-05 49183000.0 63768.0 55092.0 64528.0 45694.0 75954.0 49889.0 44476.0 71558.0 75054.0 67870.0 True False 60230.66192164355 52445.29762522212 68687.57812845038 50036.74402159796 81931.14768085604 49577.624245615065 48972.06812393039 71309.78199976274 61426.085557371975 67268.72460206099 0.8953739241816723 0.7796386498401858 1.0210923209081613 0.7438336956378823 1.2179679065647964 0.7370085361198613 0.7280064905887925 1.0600733464415637 0.9131447923347427 1.0 16.03764828484634 -7.294271641567438 24.999634456273142 0.9899567827016423 0.8795501536722792 0.11506591758042528 0.1474494233028998 1615.6934840035487 1230237.5132416675 0.0788425000047957 0.037878723945541544 5.0784169947925905e-08 7.294271641567438 -0.11040662902936316 NKST(ph)ESLQANVQR ddPTM_KYSE-520_SHP099_60min_R1 1 NKSTESLQANVQR 13 1 P26373;J3QSB4 P26373 RPL13 60S ribosomal protein L13 1 NKS(0.095)T(0.902)ES(0.003)LQANVQR 168.67 2.3343000000000002e-06 556140000.0 465270.0 437320.0 433710.0 384840.0 443720.0 443680.0 458870.0 457600.0 574670.0 423040.0 True False 439460.54560725 416310.4907692971 461667.64056053536 421415.07789363444 478638.2395785529 440910.8285452602 505257.05773963314 456012.69240464293 470324.4142518039 419292.1947201398 1.0481009452145222 0.9928887205905829 1.101064237240761 1.005063016197837 1.1415386348844965 1.051559828914893 1.2050237617155535 1.0875773461726674 1.1217103971270583 1.0 18.677596448567318 -5.761416504505656 24.999999999939778 1.108319542636331 1.0382359791535793 0.2252969797276091 0.057637742152444195 0.8386014779772841 914643.531213207 0.016445599418307782 0.019882009767699743 1.7321420125354064e-06 5.761416504505656 -0.07008356348275169 NKVPWNR ddPTM_KYSE-520_SHP099_60min_R1 1 NKVPWNR 7 1 P28482 P28482 MAPK1 Mitogen-activated protein kinase 1 0 117.17 0.0029273000000000003 436550000.0 680130.0 594510.0 452290.0 377590.0 640680.0 624640.0 499570.0 531920.0 501810.0 482120.0 False True 642401.8330944591 565948.8472222968 481445.3370895872 413476.04007342714 691097.87102945 620741.3900615574 550071.4109333545 530074.8936710614 410693.95360067155 477848.79188368394 1.344362158083744 1.1843680612675018 1.0075265340563604 0.8652863564716804 1.4462689511155535 1.2990330845341047 1.1511411565256207 1.1092942007481106 0.8594642501484885 1.0 18.86619464554948 -7.605193308846629 4.3830639575599655 0.9325169685382565 1.1780013559154048 0.2856415771935966 0.1588955121527309 0.30907700775395663 10.83395440485984 0.12708247060214847 0.04411044949076202 2.4820280836951137e-08 7.605193308846629 0.24548438737714828 NLADEIESYMNLKS(ph)PLGS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 NLADEIESYMNLKSPLGSK 19 1 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-5 DENND4C DENN domain-containing protein 4C 2 NLADEIESYMNLKS(1)PLGS(1)K 84.93299999999999 0.00090131 70646000.0 194720.0 201380.0 175410.0 189980.0 181540.0 172570.0 136290.0 173070.0 220500.0 151290.0 True False 183918.4934353035 191705.4025224576 186717.20926592327 208035.6420804304 195826.16517869508 171492.9266184087 150067.52326221933 172469.66056484182 180462.7583526596 149949.68830183885 1.2265346831871213 1.2784648283934226 1.2451990489641687 1.3873696200132697 1.3059457968629444 1.1436697772469173 1.000785829978808 1.150183521673428 1.203488719425678 1.0 17.194118997738105 -6.351116540312435 4.401985254923888 1.098293106067517 1.2911158914002447 0.647945639855086 0.0702673706538002 0.15480198239622447 5.3040235235580315 0.02617507349206485 0.02301115891545759 4.4553667526744024e-07 6.351116540312435 0.1928227853327278 NLADEIESYMNLKS(ph)PLGSK ddPTM_KYSE-520_SHP099_60min_R1 2 NLADEIESYMNLKSPLGSK 19 1 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-5 DENND4C DENN domain-containing protein 4C 1 NLADEIESYMNLKS(0.995)PLGS(0.005)K;NLADEIESYMNLKS(1)PLGSK 196.41 3.5434000000000003e-13 301410000.0 461250.0 490970.0 430250.0 366810.0 434680.0 493170.0 384270.0 529040.0 741140.0 389540.0 True False 435663.54302092077 467383.06423900503 457984.6034243397 401671.51211455197 468886.8430091171 490091.9430978774 423115.7617137942 527204.8837188642 606567.6586190021 386088.97865753435 1.128401915371326 1.2105579026475644 1.1862151699248003 1.0403599540996986 1.2144528047381158 1.2693756366782873 1.0959022015728221 1.3655009929369193 1.5710566531271928 1.0 18.558573845958062 -7.272812586772834 24.685272989816255 1.3512091435107016 1.1675676239387738 0.1659373840074616 0.14473966931492274 885.2621961673913 1921428.0099115444 0.07393392975368436 0.03601718754135198 5.3356509777665526e-08 7.272812586772834 -0.18364151957192787 NLAS(ph)PEGTLATLGLK ddPTM_KYSE-520_SHP099_60min_R1 2 NLASPEGTLATLGLK 15 0 Q8TDJ6-2;Q8TDJ6;Q8TDJ6-3 Q8TDJ6-2 DMXL2 DmX-like protein 2 1 NLAS(1)PEGTLATLGLK;NLAS(1)PEGTLATLGLK 222.5 2.1863999999999997e-14 457280000.0 713190.0 855610.0 607070.0 586210.0 607100.0 851160.0 546760.0 768150.0 876810.0 740250.0 True False 673627.928990983 814505.2113032079 646202.7035463429 641923.2221495372 654875.3160735146 845847.5947182293 602031.8366633726 765485.4669375578 717603.4065813851 733691.960905786 0.9181345372237003 1.1101460213597723 0.880754782631893 0.8749219786421608 0.892575291768268 1.1528647440459625 0.8205512241406172 1.0433335891980073 0.9780717860060254 1.0 19.484814952011906 NLAS(ph)PNCVKPK ddPTM_KYSE-520_SHP099_60min_R1 2 NLASPNCVKPK 11 1 Q8NG27;Q8NG27-3 Q8NG27 PJA1 E3 ubiquitin-protein ligase Praja-1 1 NLAS(1)PNCVKPK;NLAS(1)PNCVKPK 187.47 1.4761000000000001e-06 1229690000.0 794350.0 735430.0 700590.0 833450.0 947970.0 1341090.0 1307420.0 1551000.0 1732580.0 1274800.0 True False 750285.8220025327 700098.8388970655 745751.152383633 912660.8374141204 1022569.8457885189 1332719.7598579233 1439586.7727895735 1545619.9430061225 1417987.1467875321 1263506.2637793925 0.5938125069188673 0.5540920998705096 0.5902235499434301 0.7223239516709437 0.8093112595499242 1.0547789101349603 1.1393586356141125 1.2232784176177118 1.1222636463598188 1.0 20.26900138572484 -6.027898138647293 1.3033724365795778 1.1470969964500863 0.5766295664869112 0.9418912836468505 0.05858667564959637 0.08818851377748999 0.31005831958454566 0.025142345267269182 0.02777744275795853 9.377819326647066e-07 6.027898138647293 -0.5704674299631751 NLATS(ph)ADT(ph)PPSTVPGTGK ddPTM_KYSE-520_SHP099_60min_R1 1 NLATSADTPPSTVPGTGK 18 0 J3KRA9;Q96Q15-4;Q96Q15-3;Q96Q15-2;Q96Q15 J3KRA9 SMG1 Serine/threonine-protein kinase SMG1 2 NLAT(0.001)S(0.999)ADT(0.973)PPS(0.026)T(0.002)VPGTGK 269.39 1.1965999999999999e-29 401070000.0 545080.0 572490.0 500940.0 481400.0 503170.0 528230.0 456010.0 512790.0 582730.0 455830.0 True False 514843.325809959 544986.7210749916 533231.3939323392 527152.1112618117 542766.6163543246 524933.1206330301 502107.94102872314 511011.2511760853 476920.92142787 451791.70083037316 1.139559059769579 1.2062787343665902 1.1802593827028771 1.1668034412604955 1.2013647336963995 1.1618919065317628 1.1113704393105739 1.1310771097319168 1.0556212532264546 1.0 18.78529824388221 -7.709758322144919 0.7540290111624518 0.9992041652660842 1.1814152975274521 0.8698704684256726 0.022350043865943976 0.19830430256371956 0.24663670884450847 0.020784017130800872 0.00845029097895623 1.9509299587061786e-08 7.709758322144919 0.18221113226136787 NLDIERPTYTNLNR ddPTM_KYSE-520_SHP099_60min_R1 7 NLDIERPTYTNLNR 14 1 Q9BQE3;F5H5D3;F8VQQ4;Q9NY65;C9J2C0;Q9NY65-2;F8VVB9;P68363;P68366-2;P68366;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2;C9JDS9 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1A;TUBA8;TUBA1B;TUBA4A;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain 0 ;;;;;; 263.75 1.1305e-24 23528620000.0 15535740.0 14441470.0 9534330.0 9120570.0 15890390.0 14564680.0 10843490.0 12496400.0 11520210.0 12053830.0 False True 14673941.532470113 13747680.10411161 10148928.167267378 9987386.230600638 17140873.28904862 14473776.429626273 11939655.791464124 12453052.9050817 9428430.264861183 11947042.443937832 1.2282488826275129 1.150718277651006 0.8494929364226999 0.8359714362334452 1.4347377913389971 1.2114945182077725 0.9993817170644224 1.042354454126898 0.7891852991319501 1.0 23.510150179525365 -7.388268473454935 2.2413536535196457 0.9045044226605051 1.1042173873595067 0.16865190109980488 0.17656690573757167 0.6475402514116843 6.046357349107265 0.14454813518039392 0.05378610925646516 4.090077399411559e-08 7.388268473454935 0.19971296469900157 NLDKDMYGDDLEAR ddPTM_KYSE-520_SHP099_60min_R1 1 NLDKDMYGDDLEAR 14 1 G3V4X8;Q13573;G3V3A4 G3V4X8 SNW1 SNW domain-containing protein 1 0 75.574 0.016854 274630000.0 188790.0 213460.0 148280.0 126260.0 166540.0 203090.0 142360.0 194420.0 217220.0 180150.0 False True 178317.44235646553 203205.06119000757 157838.3660563885 138259.71243854682 179645.75051702055 201822.43997758982 156751.1380997107 193745.60239796917 177778.32367058803 178554.0111545791 0.9986750855016707 1.1380593461666195 0.8839810712498837 0.7743299158866367 1.0061143368070087 1.130315912101614 0.8778920007795677 1.0850812095743865 0.9956557263599106 1.0 17.446001018373778 -5.9759325961347045 24.999967480098242 1.0203466679529756 0.9492263413213179 0.0895988599206693 0.10514254331603443 630.7141764928692 655150.1875318083 0.03461032187025518 0.03924315481778784 1.0569815433336514e-06 5.9759325961347045 -0.07112032663165768 NLDSLEEDLDFLR ddPTM_KYSE-520_SHP099_60min_R1 2 NLDSLEEDLDFLR 13 0 P61758-2;P61758 P61758-2 VBP1 Prefoldin subunit 3 0 ; 158.42 9.9696e-06 44163000.0 59244.0 82882.0 83725.0 52708.0 77147.0 81549.0 67087.0 68556.0 86819.0 69633.0 False True 55957.617220013955 78900.22431158161 89122.04746473643 57717.35247276192 83218.02999361455 81040.02244193439 73868.80866602481 68318.19523709068 71054.85812888689 69016.10579365431 0.8107907071331599 1.1432146656822255 1.291322459299504 0.8362881650455095 1.2057769565037677 1.1742189958417737 1.070312614955112 0.9898877146350411 1.029540240090162 1.0 16.074645452124948 -7.163279611736914 5.346514552097475 1.0077253701361202 1.087278147834325 0.043671706350914885 0.1437899305935074 0.745413561900248 32.15602421736123 0.06921591347057016 0.03916904763943501 6.866262272362253e-08 7.163279611736914 0.07955277769820479 NLEELEEKS(ph)TT(ph)PPPAEPVSLPQEPPKPR ddPTM_KYSE-520_SHP099_60min_R1 2 NLEELEEKSTTPPPAEPVSLPQEPPKPR 28 2 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 2 NLEELEEKS(0.962)T(0.076)T(0.961)PPPAEPVS(0.001)LPQEPPKPR;NLEELEEKS(0.798)T(0.21)T(0.992)PPPAEPVSLPQEPPKPR 107.94 0.0033431999999999993 1922290000.0 1685230.0 1595710.0 1510780.0 1432010.0 1578800.0 1510530.0 1399340.0 1456450.0 1933150.0 1524250.0 True False 1591746.9324772842 1519049.6963904586 1608167.2961334677 1568107.7998504941 1703042.5778568012 1501102.2219673453 1540798.9434423211 1451397.9148879857 1582138.6907457747 1510746.3308485553 1.0536162822141242 1.0054962010314725 1.0644853231119171 1.037968961321071 1.1272855959214787 0.9936163281126137 1.0198925603723863 0.9607158298195337 1.0472563516716402 1.0 20.52683000749082 NLEQILNGGES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 13 NLEQILNGGESPK 13 0 G3V340;Q13033-2;Q13033;G3V3G7 G3V340 STRN3 Striatin-3 1 NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK;NLEQILNGGES(1)PK 299.65 1.3708000000000001e-30 34377750000.0 30829900.0 28518420.0 24163990.0 21972680.0 24678580.0 28122650.0 25046060.0 28350840.0 33379030.0 28880080.0 True False 29119703.989118 27148352.296178896 25721639.459150992 24060956.900872864 26620643.84408748 27947126.109782636 27577960.17078983 28252497.553175826 27318239.56887154 28624224.95956223 1.0173097797496957 0.9484397336358166 0.8985968876183807 0.8405802055728688 0.930004004709115 0.9763452512430942 0.9634482753594038 0.9870135381163491 0.954374820889101 1.0 24.770733294988503 -6.2241358822868165 5.43102542252162 0.9747297468297672 0.9213850553664831 0.24426464865018604 0.042841286964594376 0.30660926782961867 24.70949869913619 0.01570694951541112 0.015387238168716665 5.968485150882264e-07 6.2241358822868165 -0.05334469146328413 NLEQILNGGES(ph)PKQK ddPTM_KYSE-520_SHP099_60min_R1 2 NLEQILNGGESPKQK 15 1 G3V340;Q13033-2;Q13033 G3V340 STRN3 Striatin-3 1 NLEQILNGGES(1)PKQK;NLEQILNGGES(1)PKQK 183.65 4.1985e-11 1382050000.0 932770.0 1115470.0 1102010.0 580800.0 716430.0 793780.0 593520.0 617830.0 1373970.0 798450.0 True False 881027.3886691048 1061881.1468453957 1173047.327878344 635999.0573761121 772808.9650709076 788825.7245822588 653518.7937969946 615686.8919326054 1124491.6829650954 791376.3541847011 1.1132849547631036 1.3418156117886242 1.482287563528293 0.8036619416451187 0.9765378520401685 0.9967769701622309 0.8258002533703053 0.7779950571898296 1.4209316174522038 1.0 19.594004433593632 -5.262698258843721 24.999999951862733 0.9575925492427817 1.3153980023306584 0.40173685203984977 0.1900249179025201 106.23221500570213 2109669.5069109653 0.05197580240985117 0.08213048044945447 5.461371770529284e-06 5.262698258843721 0.3578054530878767 NLESHLMS(ph)PAEIPGQPVPK ddPTM_KYSE-520_SHP099_60min_R1 1 NLESHLMSPAEIPGQPVPK 19 0 Q9NRA8;Q9NRA8-3;Q9NRA8-2;B0QYZ7 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 NLES(0.274)HLMS(0.726)PAEIPGQPVPK 105.16 0.00049264 0.0 257600.0 286430.0 226450.0 219050.0 206900.0 305490.0 210730.0 263450.0 382570.0 301870.0 True False 243310.41448713106 272669.472859805 241047.32933281042 239868.44614021594 223181.85290003338 303583.3235942384 232032.6449266088 262536.15343969245 313104.9318048841 299195.666651306 0.8132150348644397 0.911341651139568 0.8056511380351513 0.8017109633468313 0.7459394562693918 1.0146648412125765 0.7755214088612736 0.8774731144273626 1.0464888589773211 1.0 18.190729754789555 -7.679482342256854 4.822286644644089 1.0228796540220182 0.840916343539797 0.49701376790489793 0.07310100406056388 0.16332997933580587 6.514142138190385 0.05383625466973555 0.018378039610469656 2.0917879542426966e-08 7.679482342256854 -0.18196331048222114 NLFASFPTEESSINYTFKT(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 3 NLFASFPTEESSINYTFKTPEK 22 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NLFASFPTEESSINY(0.009)T(0.041)FKT(0.95)PEK;NLFASFPTEESSINYT(0.005)FKT(0.994)PEK;NLFASFPTEESSINYT(0.043)FKT(0.957)PEK 136.3 3.7416000000000003e-06 3760437000.0 1335550.0 1618550.0 1136670.0 982310.0 1056150.0 1396330.0 931240.0 1186410.0 1562640.0 1314410.0 True False 1261464.3791470823 1540792.428506918 1209941.5669363043 1075668.4470577291 1139262.9963285157 1387614.9865276858 1025378.8272265707 1182294.6206201743 1278903.966948753 1302765.3499955074 0.968297459823776 1.1827090953196073 0.9287486552666425 0.8256808849432774 0.8744959300095327 1.065130406279589 0.7870786763173481 0.9075269162050185 0.9816840515087105 1.0 20.313145822928355 -4.878052077985543 8.293255718288275 0.9121856198022498 1.074646999586262 0.31045743667649184 0.09140168368267247 0.247592940907363 16.770789782389855 0.0231633342160681 0.04854195427600977 1.3241827376340553e-05 4.878052077985543 0.1624613797840122 NLFNQELLS(ph)PSKR ddPTM_KYSE-520_SHP099_60min_R1 6 NLFNQELLSPSKR 13 1 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 1 NLFNQELLS(0.995)PS(0.005)KR;NLFNQELLS(0.931)PS(0.069)KR;NLFNQELLS(0.933)PS(0.067)KR;NLFNQELLS(0.949)PS(0.051)KR;NLFNQELLS(0.861)PS(0.139)KR;NLFNQELLS(0.998)PS(0.002)KR 223.15 1.0347000000000002e-11 3086288000.0 2313363.0 2328903.0 1956520.0 1755777.0 2088106.0 2204970.0 1796508.0 2128906.0 2719757.0 2184691.0 True False 2185036.1428151904 2217019.004125327 2082640.4097426822 1922645.5181863955 2252428.062502063 2191207.9643379096 1978116.5608684649 2121521.3219763944 2225917.6882945774 2165336.3374038804 1.0090978039166556 1.0238681935127967 0.9618091996921152 0.8879200357813891 1.0402208763570655 1.011948086995597 0.913537784730532 0.9797652610956421 1.0279778018057604 1.0 21.046159702644584 -7.722354783846181 10.910335419787744 1.013957207887105 0.9774415941562781 0.08699035303219926 0.04585665943749946 1.2931251944470346 357.2609492792294 0.032610823617845945 0.012217220389302945 1.895157096937512e-08 7.722354783846181 -0.03651561373082701 NLGS(ph)GSPKPR ddPTM_KYSE-520_SHP099_60min_R1 1 NLGSGSPKPR 10 1 A0A1C7CYX9 A0A1C7CYX9 1 NLGS(0.5)GS(0.5)PKPR 86.288 0.0066288 604910000.0 757580.0 741340.0 697090.0 588880.0 690750.0 629870.0 698620.0 664740.0 863750.0 692510.0 True False 715555.5272017109 705724.9136259742 742025.5367834347 644846.9781467722 745108.0951701207 625938.7476915863 769243.3274741484 662434.172091482 706914.7733655773 686374.900164628 1.042514123156432 1.0281916099448056 1.0810790671475001 0.9394967356645832 1.0855701381146154 0.911948772516964 1.1207334756699934 0.9651200414417779 1.0299251519774728 1.0 19.38863727076187 -5.179306512348114 24.999998645742128 1.0100640338149736 1.0483544427736506 0.09483499741205459 0.06048354251160978 253.12097921320358 77042.83176215886 0.01507948272050816 0.026118420859700647 6.617492955446081e-06 5.179306512348114 0.03829040895867708 NLGS(ph)INTELQDVQR ddPTM_KYSE-520_SHP099_60min_R1 2 NLGSINTELQDVQR 14 0 A0A087X1A9;O75396 A0A087X1A9 SEC22B Vesicle-trafficking protein SEC22b 1 NLGS(0.961)INT(0.039)ELQDVQR;NLGS(1)INTELQDVQR 128.74 4.4772e-05 427520000.0 273873.0 261826.0 187947.0 177712.0 210152.0 237561.0 214678.0 257729.0 252861.0 235107.0 True False 258680.71873770966 249247.485951162 200062.3643458325 194601.695048939 226689.76679868423 236078.2936802213 236379.74729537536 256834.99825340067 206947.81650708301 233024.13489047793 1.1101026889737855 1.0696209045827338 0.8585478256999535 0.8351139041473211 0.97281668658583 1.0131066200124672 1.0144002783508865 1.102181962285211 0.8880960618278838 1.0 17.830119860576378 -6.200538997798884 5.43728382636641 1.01062289105012 0.9606783100843022 0.027746279292265363 0.09165171927260263 0.7650359813972626 47.04392104633899 0.033280886210473724 0.03302976516745052 6.301747564350201e-07 6.200538997798884 -0.049944580965817886 NLGSGS(ph)PKPR ddPTM_KYSE-520_SHP099_60min_R1 10 NLGSGSPKPR 10 1 A0A1C7CYX9 A0A1C7CYX9 1 NLGS(0.072)GS(0.928)PKPR;NLGS(0.009)GS(0.991)PKPR;NLGS(0.013)GS(0.987)PKPR;NLGS(0.027)GS(0.973)PKPR;NLGS(0.003)GS(0.997)PKPR;NLGS(0.297)GS(0.703)PKPR;NLGS(0.075)GS(0.925)PKPR;NLGS(0.002)GS(0.998)PKPR;NLGS(0.11)GS(0.89)PKPR;NLGSGS(1)PKPR 143.76 0.00013926 88906120000.0 45139660.0 40567710.0 37576040.0 34779390.0 36807290.0 36238290.0 35687790.0 36562150.0 44444310.0 34992050.0 True False 42635673.076118656 38618776.318225905 39998251.66218972 38084812.76879514 39703814.318167485 36012113.39019889 39295460.092466034 36435324.43531997 36374343.65388064 34682047.66040293 1.2293297527757137 1.1135091185033346 1.153284029070071 1.098113154728093 1.144794410841491 1.0383502653251502 1.1330201860408118 1.050552862163291 1.0487945812787125 1.0 25.047685743345077 -1.0000000000051465 0.12713676890742914 0.9686205303921428 1.7008826767431917 0.6970805930680835 0.03554392892813483 48.04234345828127 0.4161078630606462 0.1931224778972568 6.283652238098882 0.09999999999881497 1.0000000000051465 0.7322621463510489 NLHNPIVQS(ph)LEDLEDQKR ddPTM_KYSE-520_SHP099_60min_R1 1 NLHNPIVQSLEDLEDQKR 18 1 A0A1B0GWK2;Q674X7-4;Q674X7-3;Q674X7-2;Q674X7 A0A1B0GWK2 KAZN Kazrin 1 NLHNPIVQS(1)LEDLEDQKR 132.36 9.931e-06 518540000.0 1346700.0 1316800.0 987520.0 1015800.0 1312300.0 1244600.0 1114700.0 1135100.0 1255800.0 1143000.0 True False 1271995.8664201065 1253538.9514429031 1051177.1192878648 1112341.3265885927 1415570.5440343807 1236831.9897390709 1227384.754423625 1131162.6030343326 1027778.3761418131 1132873.9092405434 1.1228044498551721 1.1065123322358543 0.9278853636876089 0.9818756681705951 1.2495393639909596 1.091764917216797 1.0834257408632881 0.9984894115821257 0.9072310411233813 1.0 20.111555865048828 -7.411384389927825 3.599682519316286 0.9528464397120588 1.0787329953925597 0.2849722858363575 0.08292335100235387 0.3453540677183381 8.033798076864489 0.057061289711208975 0.023985159018190868 3.87806969773051e-08 7.411384389927825 0.1258865556805009 NLINEELS(ph)LKDELEKNENLNDDKLDEENPK ddPTM_KYSE-520_SHP099_60min_R1 1 NLINEELSLKDELEKNENLNDDKLDEENPK 30 3 P29374-3;P29374-2;P29374;H7C485 P29374-3 ARID4A AT-rich interactive domain-containing protein 4A 1 NLINEELS(1)LKDELEKNENLNDDKLDEENPK 88.346 0.0025021 96799000.0 58194.0 60975.0 61375.0 55007.0 56327.0 55909.0 42310.0 51984.0 75628.0 46204.0 True False 54965.862813137064 58045.66947465905 65331.33070347206 60234.8487415424 60759.61444321009 55560.05119260948 46587.10770580747 51803.67963715678 61895.86162673437 45794.66850616806 1.2002677299811382 1.2675202456556904 1.4266143381881367 1.3153244844086904 1.3267835847534613 1.2132427857868677 1.0173041802788174 1.1312163910560762 1.351595363516992 1.0 15.482892026617606 -6.472912939547228 4.633711320218773 1.1330345292996664 1.3103518750107115 0.406410065724502 0.10345509847701574 0.2273629316539752 10.588832859689147 0.03892569276525269 0.033013431939522296 3.3657903462658977e-07 6.472912939547228 0.17731734571104507 NLKPIKPMQFLGDEETVR ddPTM_KYSE-520_SHP099_60min_R1 2 NLKPIKPMQFLGDEETVR 18 2 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 0 ; 164.59 1.6215999999999998e-08 3585200000.0 2502500.0 2331900.0 1728830.0 1781310.0 2544300.0 2498800.0 1984420.0 2193900.0 2296400.0 2439600.0 False True 2363681.3363899295 2219872.02374674 1840273.1480258023 1950605.166829618 2744521.9349132613 2483204.0623172023 2185024.5396728544 2186289.872960112 1879431.6475330954 2417987.041980079 0.9775409443279404 0.9180661373308671 0.7610765136767692 0.8067062118051204 1.1350441037375387 1.0269716169709981 0.9036543627973901 0.9041776630737314 0.7772711825593727 1.0 21.205375082512877 -4.268951614093593 6.970490495857668 0.9135674758876953 0.9783627079979442 0.02802048113066491 0.11082903564166373 0.5204589477089021 188.19242512160898 0.02972921513081759 0.1573403412363062 5.383297559290549e-05 4.268951614093593 0.06479523211024896 NLKPIKPMQFLGDEETVRK ddPTM_KYSE-520_SHP099_60min_R1 1 NLKPIKPMQFLGDEETVRK 19 3 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 0 156.39 1.9044e-07 3819800000.0 1614600.0 1318200.0 1148600.0 962630.0 1685100.0 1449400.0 1001200.0 1013700.0 1346500.0 919090.0 False True 1525034.919374699 1254871.693341461 1222640.5938249792 1054118.0657747374 1817707.7830925381 1440353.756972367 1102411.066770373 1010183.7112993591 1102009.5425027476 910947.5776411989 1.6741192981967343 1.377545452824867 1.3421635051611598 1.1571665501370156 1.9954032786379405 1.5811598738777137 1.2101805788044886 1.108937260599695 1.2097398023235137 1.0 19.79700850798866 -6.865051637238268 4.822791117586821 1.1278070543153795 1.5108452728600361 0.4429945838337678 0.21507011221365832 0.2311546428613415 8.869705202698865 0.098306940278456 0.06556775624889083 1.364420898479418e-07 6.865051637238268 0.3830382185446566 NLKPSS(ph)ETK ddPTM_KYSE-520_SHP099_60min_R1 2 NLKPSSETK 9 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 NLKPS(0.143)S(0.855)ET(0.001)K;NLKPS(0.023)S(0.977)ETK 101.89 0.001446 855660000.0 637860.0 625460.0 599820.0 566200.0 634600.0 546470.0 523690.0 595380.0 684050.0 593070.0 True False 602476.6342576145 595411.9627653993 638485.356945932 620011.4777657622 684539.409619918 543059.2780272453 576629.6959218703 593314.7657427369 559843.7634972186 587815.8612014788 1.0249410980951918 1.012922586927808 1.0861996061843011 1.0547716022811575 1.1645473604960899 0.9238595177021044 0.980969949914682 1.0093548080346428 0.9524135030193197 1.0 19.16500476259922 -6.281839524044739 24.99969372836259 0.9743823836055624 1.0657800439783836 0.5350486369707215 0.044399085774759144 710.3567749074488 870515.6722845352 0.015986473634775997 0.01411517541497233 5.225892550435279e-07 6.281839524044739 0.09139766037282115 NLLEDDS(ph)DEEEDFFLR ddPTM_KYSE-520_SHP099_60min_R1 4 NLLEDDSDEEEDFFLR 16 0 O75379 O75379 VAMP4 Vesicle-associated membrane protein 4 1 NLLEDDS(1)DEEEDFFLR;NLLEDDS(1)DEEEDFFLR;NLLEDDS(1)DEEEDFFLR;NLLEDDS(1)DEEEDFFLR 383.39 5.3357999999999994e-86 1080849000.0 806190.0 866460.0 729540.0 763660.0 838470.0 842920.0 795430.0 855880.0 1060480.0 792310.0 True False 761469.033600078 824833.9610170252 776567.3157052721 836238.0167972494 904452.8187582928 837659.0236147024 875839.8270486982 852911.1520438931 867923.5645252995 785290.7498078523 0.9696651002019275 1.0503548669315772 0.9888914594948245 1.06487694780801 1.1517426112297866 1.0666864773584355 1.1153064355628812 1.0861087466681434 1.1052257584056173 1.0 19.582867377669473 -5.432973880052402 4.898533039322651 1.0934572795117652 1.0086915437149717 0.4468708513185141 0.04152948878022807 0.1872321270716631 7.482291043085268 0.011030716581949653 0.016440055853963107 3.6899979080553014e-06 5.432973880052402 -0.08476573579679347 NLLEENFEEHSMS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 2 NLLEENFEEHSMSPER 16 0 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 NLLEENFEEHS(0.002)MS(0.998)PER;NLLEENFEEHS(0.004)MS(0.996)PER 200.58 6.798600000000001e-10 0.0 364020.0 355420.0 313160.0 330410.0 336990.0 305350.0 297750.0 308470.0 365500.0 310810.0 True False 343827.0849441204 338345.08970370336 333346.7946737158 361812.0670586113 363509.1957891837 303444.1973861689 327849.4757599663 307399.98956743925 299134.413505202 308056.4652065211 1.1161170881890716 1.098321664753495 1.082096408690011 1.1744991841546077 1.1800083323863602 0.9850278493026915 1.0642512421876165 0.9978689762649787 0.9710376093053662 1.0 18.232835288367312 -6.270096710518468 24.9945882437807 1.007292323699585 1.1282247390180251 0.7518844393620777 0.03631513257090984 361.4580131124622 1043562.946991246 0.013764297225315874 0.012332867860179174 5.369122211895376e-07 6.270096710518468 0.12093241531844012 NLLEIS(ph)GPETVPLPNVPSIALPSKPAK ddPTM_KYSE-520_SHP099_60min_R1 1 NLLEISGPETVPLPNVPSIALPSKPAK 27 1 Q9H444 Q9H444 CHMP4B Charged multivesicular body protein 4b 1 NLLEIS(0.969)GPET(0.031)VPLPNVPSIALPSKPAK 138.1 1.5796999999999999e-06 171300000.0 254570.0 280280.0 181740.0 218910.0 231570.0 312700.0 185800.0 289090.0 296210.0 216110.0 True False 240448.49462728656 266814.928091143 193455.25119428124 239715.14058230878 249793.2415469341 310748.3233098248 204582.4772332552 288087.21426411305 242425.73084644595 214195.4335310358 1.1225659233881233 1.2456611408220473 0.9031716876739606 1.1191421620460238 1.1661931229301412 1.4507700663226277 0.9551206291408275 1.3449736510016248 1.1317969148549554 1.0 17.7085681977913 NLLQQS(ph)WEDMKR ddPTM_KYSE-520_SHP099_60min_R1 5 NLLQQSWEDMKR 12 1 Q8TDM6-4;Q8TDM6;Q8TDM6-2;R4GMQ2 Q8TDM6-4 DLG5 Disks large homolog 5 1 NLLQQS(1)WEDMKR;NLLQQS(1)WEDMKR;NLLQQS(1)WEDMKR;NLLQQS(1)WEDMKR;NLLQQS(1)WEDMKR 213.94 7.167699999999999e-11 1669810000.0 1826620.0 1721860.0 1510220.0 1566060.0 1734590.0 1641110.0 1528800.0 1675050.0 2033890.0 1600550.0 True False 1725293.7473233053 1639139.2610354463 1607571.197637437 1714897.8715468927 1871092.3645329557 1630867.2237511545 1683346.0236501636 1669239.6425096071 1664586.8461945166 1586370.3722090563 1.0875731024406332 1.0332639147520817 1.013364360429184 1.08101985613792 1.1794801499774719 1.028049472129346 1.0611305235775845 1.0522382866903606 1.0493053043322678 1.0 20.597298207811555 -8.240001306261352 0.8861105969941816 1.0003600709257916 1.0695058833702586 0.18807544612618765 0.0433476819703637 1.755903004344305 2.76973358886359 0.04487471854788236 0.01534511446439231 5.754382065442243e-09 8.240001306261352 0.06914581244446705 NLLSVAYK ddPTM_KYSE-520_SHP099_60min_R1 4 NLLSVAYK 8 0 P31947;P31947-2;P31946-2;P31946;Q4VY20;Q4VY19;A0A0J9YWE8;A0A0J9YWZ2;P61981;Q04917;A2IDB2;P27348;E9PG15;P62258;P62258-2;B4DJF2;I3L3T1;K7EIT4;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1 P31947;P31946-2;P61981;P27348;P62258;P63104 SFN;YWHAB;YWHAG;YWHAH;YWHAQ;YWHAE;YWHAZ 14-3-3 protein sigma;14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein eta;14-3-3 protein theta;14-3-3 protein epsilon;14-3-3 protein zeta/delta 0 ;;; 128.69 0.0062529 5740050000.0 7343500.0 9448950.0 5861400.0 5228300.0 7707890.0 8970410.0 6055450.0 7327230.0 6741790.0 7001140.0 False True 6936141.416095684 8995008.258836888 6239235.222571593 5725196.060054286 8314457.091105064 8914422.34378536 6667593.981496853 7301813.549318334 5517650.882695586 6939115.346404503 0.9995714251514266 1.296275938617686 0.8991398630957255 0.8250613765947545 1.1982013089627042 1.2846626549311306 0.9608708961656994 1.0522686516663486 0.7951519188327879 1.0 22.72632031761659 -7.65441413157719 7.794246980586676 0.8988439510611342 1.068085847398437 0.15646599926955784 0.15516314554163324 0.42751464331426814 27.530168336072173 0.11040460404772896 0.04112196099269207 2.2160822153350026e-08 7.65441413157719 0.1692418963373027 NLMPS(ph)AGK ddPTM_KYSE-520_SHP099_60min_R1 1 NLMPSAGK 8 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 NLMPS(1)AGK 88.338 0.010215 0.0 925060.0 972690.0 821690.0 777160.0 670340.0 753040.0 752820.0 832610.0 939760.0 798660.0 True False 873745.0777386077 925960.5123625448 874657.452150484 851021.0527383254 723091.9442871358 748339.9980339943 828922.3924151738 829721.8702426351 769123.273421747 791584.4937480773 1.1037925636990535 1.1697557489765997 1.10494515627645 1.0750855524074527 0.9134741142583077 0.945369703353682 1.0471685574464769 1.0481785290082946 0.9716249869676217 1.0 19.59438382632216 -5.549703355928811 5.359981089196367 0.9905490573706317 1.1250612363710002 0.68919970070486 0.04233641393745937 0.11256545262325854 9.017356675285747 0.013870988914350142 0.018532620246812175 2.8203086803132036e-06 5.549703355928811 0.1345121790003685 NLNDQVLFIDQGNRPLFEDMTDS(ph)DCR ddPTM_KYSE-520_SHP099_60min_R1 1 NLNDQVLFIDQGNRPLFEDMTDSDCR 26 1 Q14116-2;Q14116 Q14116-2 IL18 Interleukin-18 1 NLNDQVLFIDQGNRPLFEDMT(0.03)DS(0.97)DCR 107.0 0.00073123 53291000.0 47378.0 41570.0 45986.0 45795.0 45746.0 52616.0 46521.0 45209.0 48532.0 47073.0 True False 44749.84789429852 39572.91480215791 48950.33114020152 50147.343031231205 49345.94994086474 52287.60402708581 51223.79668120704 45052.18053085993 39719.81219215998 46655.96984223981 0.9591451650370455 0.8481854505643717 1.0491761570002671 1.0748322926475853 1.057655646377531 1.120705543232485 1.0979044451205848 0.9656252068748575 0.8513339734757759 1.0 15.509774071789533 -4.772672155628793 24.985810771342862 1.0345865483715855 0.9036653050542467 0.2871295190619214 0.07712317732659112 235.7946288180664 524496.7112913482 0.021661140906654185 0.045747078374982236 1.6878266673323245e-05 4.772672155628793 -0.1309212433173388 NLNDQVLFIDQGNRPLFEDMTDS(ph)DCRDNAPR ddPTM_KYSE-520_SHP099_60min_R1 6 NLNDQVLFIDQGNRPLFEDMTDSDCRDNAPR 31 2 Q14116-2;Q14116 Q14116-2 IL18 Interleukin-18 1 NLNDQVLFIDQGNRPLFEDMT(0.286)DS(0.714)DCRDNAPR;NLNDQVLFIDQGNRPLFEDMT(0.011)DS(0.989)DCRDNAPR;NLNDQVLFIDQGNRPLFEDMT(0.029)DS(0.971)DCRDNAPR;NLNDQVLFIDQGNRPLFEDMT(0.014)DS(0.986)DCRDNAPR;NLNDQVLFIDQGNRPLFEDMT(0.036)DS(0.964)DCRDNAPR;NLNDQVLFIDQGNRPLFEDMT(0.043)DS(0.957)DCRDNAPR 253.43 6.292999999999999e-32 1583170000.0 429801.0 456044.0 422324.0 367448.0 379218.0 367607.0 359524.0 418473.0 513667.0 367310.0 True False 405959.08174294786 434134.96170400083 449547.6807822915 402370.1474427305 409060.29914473085 365312.62835610675 395868.1945361083 417021.4148353324 420398.02129131806 364055.91916285595 1.1151008962481586 1.192495270238405 1.2348314012199644 1.1052427010882775 1.1236194156253856 1.0034519674783495 1.0873829367927994 1.1454872531513023 1.1547622196557616 1.0 18.473800540527872 -5.409644882350155 6.164320079428581 1.0911774805117966 1.181677482635967 0.3636975846064623 0.05609973695763516 0.2746739742145213 13.100045266981091 0.016393727566958664 0.024405758985823905 3.893633928729706e-06 5.409644882350155 0.09050000212417042 NLNDQVLFIDQGNRPLFEDMTDSDCR ddPTM_KYSE-520_SHP099_60min_R1 4 NLNDQVLFIDQGNRPLFEDMTDSDCR 26 1 Q14116-2;Q14116 Q14116-2 IL18 Interleukin-18 0 ;;; 190.81 3.0885999999999997e-15 777010000.0 492379.0 388486.0 328473.0 311122.0 461989.0 396130.0 341264.0 391953.0 374105.0 342679.0 False True 465065.75533679745 369822.54943062563 349646.8951553822 340690.94133775996 498344.90594216227 393657.6057330375 375762.2955356819 390593.4065255176 306176.9624195997 339643.13066022773 1.3692776722224953 1.0888562613109016 1.0294537518709956 1.0030850342107476 1.4672603711237624 1.1590330267178135 1.1063444586829787 1.150011206663442 0.9014666712806068 1.0 18.373660150166906 -7.7302346316164 9.167115634174383 0.9508669443011201 1.1660126692590278 0.28856747702594154 0.1385376143754554 0.3421446943416157 95.54598660862283 0.09888830938832484 0.036309209532294655 1.861081398544264e-08 7.7302346316164 0.21514572495790774 NLNDQVLFIDQGNRPLFEDMTDSDCRDNAPR ddPTM_KYSE-520_SHP099_60min_R1 2 NLNDQVLFIDQGNRPLFEDMTDSDCRDNAPR 31 2 Q14116-2;Q14116 Q14116-2 IL18 Interleukin-18 0 ; 183.48 2.2851999999999997e-15 550150000.0 110986.0 124114.0 69864.0 74550.0 116725.0 98667.0 79216.0 64753.0 89370.0 73082.0 False True 104829.38533489418 118151.377141088 74367.54522635229 81635.20958572526 125910.59342559871 98051.18265433474 87223.92635365744 64528.386956463844 73142.66083436366 72434.55033693557 1.4472290481168342 1.631146691620182 1.0266860894479943 1.1270203129030556 1.7382670678552528 1.3536521204071978 1.2041757137709534 0.890850935862851 1.0097758665462029 1.0 16.14439038776976 -7.01347253265793 3.0067725840264625 0.9645234151671641 1.385157963211528 0.47169578331054196 0.1989356512709383 0.25220751904650107 4.6174643946590175 0.10779763841809473 0.061641276161052326 9.694545813815011e-08 7.01347253265793 0.42063454804436395 NLNDS(ph)SLFVSAEEFGHLLDENMGSK ddPTM_KYSE-520_SHP099_60min_R1 2 NLNDSSLFVSAEEFGHLLDENMGSK 25 0 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 NLNDS(0.888)S(0.075)LFVS(0.037)AEEFGHLLDENMGSK;NLNDS(0.775)S(0.207)LFVS(0.018)AEEFGHLLDENMGSK 64.273 0.03167 62132000.0 23080.0 24953.0 25214.0 26848.0 21437.0 18631.8 19046.3 20504.1 30495.0 24962.0 True False 21799.706391160675 23754.22042478339 26839.33478382641 29399.625847854473 23123.969940154708 18515.5120250847 20971.68587797498 20432.97606279291 24957.876716391624 24740.856100142144 0.8811217486946795 0.9601211990658203 1.0848183537057237 1.1883026896423994 0.9346471216095814 0.748377984583093 0.8476540097516871 0.8258799121617912 1.0087717504750466 1.0 14.594607801854863 -5.993063683211151 24.981502265021266 0.8693672123844292 1.0319363501201035 0.2875074373009531 0.10423480728475462 202.8251422879838 730478.4207058579 0.033627642627891564 0.03804843142582696 1.0160996851397085e-06 5.993063683211151 0.16256913773567438 NLNIINTHAYNQPEDLVYS(ph)QPEMR ddPTM_KYSE-520_SHP099_60min_R1 10 NLNIINTHAYNQPEDLVYSQPEMR 24 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 NLNIINTHAYNQPEDLVYS(1)QPEMR;NLNIINTHAYNQPEDLVY(0.023)S(0.977)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR;NLNIINTHAYNQPEDLVYS(1)QPEMR 264.57 9.545e-38 10165200000.0 2737659.0 2794507.0 2719537.0 2502349.0 2445462.0 2533968.0 2336080.0 2237817.0 3064355.0 2631022.0 True False 2585795.5978820818 2660254.689079476 2894842.706433052 2740171.496601337 2637905.9466245594 2518152.5657842983 2572233.764343722 2230054.5351374126 2507945.3781032385 2607713.1919841394 0.9915950902233305 1.0201484953394584 1.1101077815349945 1.0507948132579772 1.0115782497604529 0.9656554921472416 0.9863944287471959 0.85517630619517 0.9617412627325821 1.0 21.314353773534332 -6.327255836611778 1.5931248980279957 0.9374078441691902 1.0456304519280444 0.45516978751988724 0.04603545934681205 0.32464071823812957 1.6394797080789976 0.021100698272030566 0.01823129581301088 4.706999621545283e-07 6.327255836611778 0.10822260775885417 NLNNSNLFS(ph)PVNR ddPTM_KYSE-520_SHP099_60min_R1 7 NLNNSNLFSPVNR 13 0 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;P52948-4;P52948-3;H0YEN4 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 NLNNS(0.008)NLFS(0.992)PVNR;NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR;NLNNSNLFS(1)PVNR 253.79 1.3599000000000002e-16 21981340000.0 10038420.0 9850290.0 8771660.0 7457790.0 8373320.0 10340490.0 9285630.0 10995330.0 13097040.0 11467950.0 True False 9481568.831505846 9377067.28281328 9337095.238752238 8166576.1193336835 9032252.646326274 10275951.166300004 10224312.099415665 10957189.766559307 10718947.685510732 11366352.884930085 0.8341786435362962 0.8249847050979501 0.8214680059011445 0.7184869414147101 0.7946482691296304 0.9040675817767567 0.8995244299489787 0.9640022509847234 0.9430419584915662 1.0 23.438266075971168 -6.576066034179665 1.6737478270964175 0.9588000904252706 0.7971598829078607 0.7930140735910434 0.03735108664773235 0.17924064100835563 1.0198668866746068 0.019830605453314103 0.01418707928263298 2.654201961695362e-07 6.576066034179665 -0.16164020751740993 NLNNYEVEY(ph)LCDY(ph)KVVKDMEY(ph)YLVK ddPTM_KYSE-520_SHP099_60min_R1 14 NLNNYEVEYLCDYKVVKDMEYYLVK 25 2 Q9H5I1-3;Q9H5I1 Q9H5I1-3 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 3 NLNNY(0.008)EVEY(0.748)LCDY(0.748)KVVKDMEY(0.748)Y(0.748)LVK;NLNNY(0.007)EVEY(0.782)LCDY(0.768)KVVKDMEY(0.721)Y(0.721)LVK;NLNNY(0.002)EVEY(0.888)LCDY(0.703)KVVKDMEY(0.703)Y(0.703)LVK;NLNNY(0.006)EVEY(0.952)LCDY(0.681)KVVKDMEY(0.681)Y(0.681)LVK;NLNNY(0.008)EVEY(0.748)LCDY(0.748)KVVKDMEY(0.748)Y(0.748)LVK;NLNNY(0.004)EVEY(0.962)LCDY(0.708)KVVKDMEY(0.663)Y(0.663)LVK;NLNNY(0.005)EVEY(0.749)LCDY(0.749)KVVKDMEY(0.749)Y(0.749)LVK;NLNNY(0.008)EVEY(0.748)LCDY(0.748)KVVKDMEY(0.748)Y(0.748)LVK;NLNNY(0.001)EVEY(0.754)LCDY(0.754)KVVKDMEY(0.754)Y(0.736)LVK;NLNNY(0.008)EVEY(0.748)LCDY(0.748)KVVKDMEY(0.748)Y(0.748)LVK;NLNNY(0.002)EVEY(0.931)LCDY(0.689)KVVKDMEY(0.689)Y(0.689)LVK;NLNNY(0.034)EVEY(0.961)LCDY(0.932)KVVKDMEY(0.537)Y(0.537)LVK;NLNNY(0.008)EVEY(0.748)LCDY(0.748)KVVKDMEY(0.748)Y(0.748)LVK;NLNNY(0.006)EVEY(0.748)LCDY(0.748)KVVKDMEY(0.748)Y(0.748)LVK 50.215 0.028488999999999997 71703150000.0 25625960.0 22695200.0 24540430.0 15700290.0 26812950.0 21861620.0 27149840.0 27220960.0 30114720.0 24192560.0 True False 24204436.914715238 21604888.525810312 26122345.3838763 17192440.841135684 28922976.620183367 21725173.520423815 29894410.784103982 27126536.843179837 24646645.97831291 23978232.739926845 1.0094337300518288 0.9010208867409728 1.0894191272228013 0.7170020004229943 1.2062180284046908 0.9060373112589154 1.2467311960954461 1.1312984212556525 1.0278758341215477 1.0 24.515221996387442 -5.791593786804099 24.99999245435554 1.0919274068252265 0.9386471308277198 0.2636919567071453 0.12805095877220982 277.7143007622583 230242.02062653034 0.037774025828995916 0.04283699969073278 1.6158692380751192e-06 5.791593786804099 -0.1532802759975067 NLNNYEVEY(ph)LCDYKVVKDMEY(ph)Y(ph)LVK ddPTM_KYSE-520_SHP099_60min_R1 4 NLNNYEVEYLCDYKVVKDMEYYLVK 25 2 Q9H5I1-3;Q9H5I1 Q9H5I1-3 SUV39H2 Histone-lysine N-methyltransferase SUV39H2 3 NLNNY(0.015)EVEY(0.506)LCDY(0.506)KVVKDMEY(0.987)Y(0.987)LVK;NLNNY(0.024)EVEY(0.553)LCDY(0.553)KVVKDMEY(0.935)Y(0.935)LVK;NLNNY(0.008)EVEY(0.589)LCDY(0.589)KVVKDMEY(0.907)Y(0.907)LVK;NLNNY(0.003)EVEY(0.908)LCDY(0.295)KVVKDMEY(0.897)Y(0.897)LVK 57.945 0.014665000000000001 6895250000.0 7648950.0 6900290.0 7187950.0 4587770.0 7650530.0 6245340.0 7686630.0 7693670.0 8694610.0 6813690.0 True False 7224647.495696198 6568789.710853558 7651296.758126632 5023790.281436653 8252583.185438806 6206360.5164687615 8463669.574679535 7666982.454486069 7115887.997281702 6753326.007570599 1.0697910166926992 0.9726747536680189 1.1329671852875742 0.7438986768600974 1.2220027844335537 0.9190079835493385 1.25325944063586 1.1352898476826447 1.0536864338112308 1.0 22.687166772647107 NLPFDFTWK ddPTM_KYSE-520_SHP099_60min_R1 2 NLPFDFTWK 9 0 A0A087X0X3;P52272-2;P52272;M0R2I7;M0QY96 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 ; 118.18 0.010486 355689000.0 302160.0 335390.0 294730.0 251080.0 375560.0 339920.0 294720.0 279710.0 318960.0 276690.0 False True 285398.5824589733 319277.36096934654 313728.76738467306 274942.56771004526 405114.43535590335 337798.4331930778 324513.17379001627 278739.75129480485 261044.90432727544 274238.74186156294 1.040693887820722 1.1642314240579448 1.1439987116883903 1.0025664712567768 1.4772326936957985 1.231767732378236 1.183323594570136 1.0164127409668253 0.9518892281786071 1.0 18.065072870292717 -7.319270190814222 3.949025334585944 0.9793561202762193 1.1833310785525788 0.34088178310324546 0.12044756222037617 0.2794484548798389 8.898724858908432 0.0744551363067852 0.03405598620787839 4.7943508136685565e-08 7.319270190814222 0.20397495827635947 NLPIMSTAS(ph)VEIDDALYSR ddPTM_KYSE-520_SHP099_60min_R1 4 NLPIMSTASVEIDDALYSR 19 0 A0AVT1;A0AVT1-4;A0AVT1-3 A0AVT1 UBA6 Ubiquitin-like modifier-activating enzyme 6 1 NLPIMS(0.014)T(0.019)AS(0.967)VEIDDALYSR;NLPIMS(0.015)T(0.212)AS(0.773)VEIDDALYSR;NLPIMS(0.002)T(0.061)AS(0.937)VEIDDALYSR;NLPIMSTAS(1)VEIDDALYSR 235.25 5.4939e-26 96048000.0 66707.0 84335.0 73589.0 56080.0 47598.5 71944.0 59470.0 79278.0 80938.0 59333.0 True False 63006.629732892376 80283.4200105843 78332.66468656308 61409.82633893317 51344.23115158157 71494.97080972814 65481.807971268565 79003.00312162424 66241.69948094129 58807.3557803755 1.0714072907511718 1.3651935025001676 1.332021541303568 1.044254167255487 0.8730919877325203 1.2157487759989813 1.113496893412786 1.3434204288434983 1.1264186019233786 1.0 15.843709002028506 -5.260738144432983 24.999745817152988 1.1122937766898118 1.2671060519364439 0.20312541960711983 0.13817141050211731 107.63712967564672 3837290.1081345878 0.040175713460399984 0.06458064372228974 5.486076453057426e-06 5.260738144432983 0.1548122752466321 NLQEILHGAVR ddPTM_KYSE-520_SHP099_60min_R1 2 NLQEILHGAVR 11 0 P00533;P00533-3;P00533-4;P00533-2;C9JYS6 P00533 EGFR Epidermal growth factor receptor 0 ; 173.28 1.686e-05 538160000.0 355290.0 453980.0 273220.0 440720.0 632490.0 504470.0 410540.0 561580.0 511840.0 330840.0 False True 335581.35544694425 432170.119362128 290832.19836745656 482605.8962927008 682263.3646241757 501321.4156063545 452041.38968428713 559632.0100537573 418902.7584363961 327909.0149896255 1.0233977722679002 1.3179574199135733 0.886929559947164 1.47176769845126 2.0806483915843588 1.5288430408728333 1.378557371161598 1.7066685710713478 1.2774969253274402 1.0 18.322936039790974 -5.389049475837889 6.518293088837011 1.5476070721364832 1.1031154156940906 0.2976898304603042 0.284884906073484 0.27394313794541686 13.321317944573508 0.07889594895357788 0.11745822658572935 4.082728722876734e-06 5.389049475837889 -0.44449165644239264 NLRMEK ddPTM_KYSE-520_SHP099_60min_R1 1 NLRMEK 6 1 Q8WVV4;Q8WVV4-1 Q8WVV4 POF1B Protein POF1B 0 65.89699999999999 0.05271 2415100000.0 1554200.0 1518200.0 1434000.0 1484900.0 1471800.0 1550900.0 1554300.0 1497500.0 1692000.0 1439900.0 False True 1467985.4277791108 1445263.3931353397 1526437.9344811228 1626024.4495485357 1587622.2866035241 1541220.257822854 1711423.8125061812 1492305.5220191285 1384775.451848979 1427143.6062252503 1.0286178779596582 1.0126965407202544 1.0695755688654927 1.1393558731271052 1.1124474647668674 1.0799335477523055 1.1991952351822834 1.0456589760901704 0.9703126201235392 1.0 20.444699082529528 -7.529515275261722 9.988725441984554 0.9925192182226438 1.092291974670883 0.41219882697301324 0.05065347261150596 0.1809168272112071 212.31642050305518 0.035515897529911314 0.014076180249858562 2.9545049690600626e-08 7.529515275261722 0.09977275644823924 NLS(ph)DSEKELYIQHAK ddPTM_KYSE-520_SHP099_60min_R1 1 NLSDSEKELYIQHAK 15 1 Q00059-2;Q00059 Q00059-2 TFAM Transcription factor A, mitochondrial 1 NLS(0.974)DS(0.026)EKELYIQHAK 72.801 0.011572 663610000.0 406210.0 579010.0 526210.0 502810.0 500440.0 497200.0 405270.0 458270.0 639410.0 481240.0 True False 383676.72154044086 551193.4904882719 560130.3385657684 550596.9112246607 539821.7808858996 494096.79037302505 446238.64665404457 456680.3683310226 523309.2622143946 476976.5879990545 0.804393194957404 1.1555986275983938 1.1743350777771902 1.1543478759291894 1.1317573953692033 1.0358931712891628 0.9355567084037448 0.957448184714525 1.0971382566379377 1.0 18.86355892891374 -6.495265108913706 6.394012445642728 0.9926680987398792 1.096069341241397 0.12158331248460452 0.10719132351201129 0.34554879107339664 49.792380802316124 0.03955537987907344 0.03354646673058071 3.196942985375264e-07 6.495265108913706 0.10340124250151794 NLS(ph)FEIK ddPTM_KYSE-520_SHP099_60min_R1 11 NLSFEIK 7 0 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK;NLS(1)FEIK 135.87 0.0018081 29551190000.0 9614400.0 7636390.0 7185290.0 6776090.0 6859490.0 6465980.0 6601700.0 7031110.0 8074010.0 6340190.0 True False 9081070.066168765 7269526.361944923 7648465.29027049 7420087.556294249 7399292.8378407415 6425623.420386502 7269064.262383107 7006720.720483404 6607973.3132288335 6284020.849193178 1.445105018602016 1.156827218814571 1.2171292033909302 1.1807865910003996 1.17747744882017 1.0225337526070595 1.1567536831639254 1.1150059633209228 1.0515517805892143 1.0 22.583256536553627 -1.0000000000000002 0.4047217616559201 1.073832592109655 6.391261483846506 0.7322424639654104 0.061878141397583526 40.13374068163927 0.5293484564049195 0.04302487237399209 170.76153800056565 0.09999999999999995 1.0000000000000002 5.317428891736851 NLS(ph)FEIKK ddPTM_KYSE-520_SHP099_60min_R1 1 NLSFEIKK 8 1 Q05209-2;Q05209-3;Q05209 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 NLS(1)FEIKK 71.03 0.023681999999999998 0.0 221760.0 217160.0 256950.0 205620.0 204780.0 207050.0 181150.0 219860.0 301220.0 181610.0 True False 209458.5307323998 206727.30763619466 273513.40813453635 225162.0629780929 220895.02096118315 205757.72414870237 199462.40985362855 219097.3569757099 246526.04113826802 180001.0766904418 1.1636515435550292 1.148478172670686 1.5195098449600557 1.2508928675205484 1.2271872203357372 1.1430916299603904 1.1081178708539365 1.217200257932369 1.3695809251309814 1.0 17.45764601061018 -5.90765267697491 3.2042179984366936 1.178120693787047 1.2797014827300592 0.12136113269992266 0.12850485067984077 0.5965766698474695 12.256207161678352 0.043540375303718064 0.04992471369162104 1.2369362664107835e-06 5.90765267697491 0.10158078894301226 NLS(ph)FNELYPSGTLK ddPTM_KYSE-520_SHP099_60min_R1 6 NLSFNELYPSGTLK 14 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 NLS(1)FNELYPSGTLK;NLS(1)FNELYPSGTLK;NLS(1)FNELYPSGTLK;NLS(1)FNELYPSGTLK;NLS(1)FNELYPSGTLK;NLS(1)FNELYPSGTLK 337.35 5.8506e-54 2770051000.0 4784660.0 5195110.0 4184080.0 3718370.0 3531560.0 4509240.0 4051510.0 4640930.0 5329990.0 5093690.0 True False 4519245.371816753 4945529.117580915 4453792.4915646985 4071762.766831291 3809473.680172265 4481096.1605423475 4461076.169727157 4624831.69703121 4362198.174113791 5048563.869430859 0.89515463975426 0.9795912749616141 0.8821899864499069 0.8065190165238643 0.7545658089498865 0.8875981915719562 0.8836327092421372 0.9160687705734785 0.8640473383979504 1.0 22.267441621918973 -10.05661501543282 9.13189591711161 0.9999999983777597 0.8740667343396472 0.3032762563087815 0.057121316999627116 3.658944740465935e-10 5.036823243440687e-11 0.06173444818187829 0.014972802976064957 8.777785917309586e-11 10.05661501543282 -0.12593326403811245 NLS(ph)GSTLYPVSNIPR ddPTM_KYSE-520_SHP099_60min_R1 2 NLSGSTLYPVSNIPR 15 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 NLS(0.961)GS(0.039)TLYPVSNIPR;NLS(0.996)GS(0.003)T(0.001)LYPVSNIPR 184.99 6.0554e-11 1072160000.0 875720.0 784160.0 663570.0 623780.0 683850.0 765410.0 647110.0 821430.0 1017180.0 815310.0 True False 827142.0658954604 746487.776551844 706344.7839495386 683063.8636537049 737665.1044257509 760632.7922755757 712526.193984994 818580.6510532042 832485.7530211254 808086.987701581 1.0235804789383842 0.9237715591424855 0.8740949856878344 0.8452850671392744 0.9128535858792516 0.9412758822401313 0.8817444221093228 1.0129858090915065 1.0301932411867456 1.0 19.624151076783694 -7.2736883415564115 23.34222782880518 1.0161921886400038 0.9117345795787968 0.5010926967374827 0.045528584373039374 274.9397510721279 523932.60404616746 0.025906157851627476 0.012614933454487585 5.324902478866971e-08 7.2736883415564115 -0.10445760906120705 NLS(ph)LVR ddPTM_KYSE-520_SHP099_60min_R1 4 NLSLVR 6 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L0N7 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 NLS(1)LVR;NLS(1)LVR;NLS(1)LVR;NLS(1)LVR 87.476 0.016291 1385400000.0 1327760.0 1098700.0 1183610.0 971900.0 1049320.0 1178950.0 1175520.0 1155920.0 1327410.0 1236690.0 True False 1254106.505976062 1045916.802817678 1259907.394442958 1064269.08378761 1131895.5141858996 1171591.7357407026 1294353.0335696249 1151910.3833137571 1086385.8052830114 1225733.8887302615 1.0231474527274365 0.853298429972548 1.0278800366269525 0.8682709139176099 0.9234431099546664 0.955828786747795 1.055982089970969 0.9397719961116697 0.8863145706189124 1.0 20.225214368025714 -6.518394999866627 24.989580978562227 0.9712706208428089 0.9358420511385063 0.04625495681271541 0.06620979512171114 639.6413015304109 3565000.0246886276 0.02427570975660722 0.019278803006771258 3.0311330515229217e-07 6.518394999866627 -0.03542856970430264 NLS(ph)NEELTK ddPTM_KYSE-520_SHP099_60min_R1 9 NLSNEELTK 9 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 NLS(1)NEELTK;NLS(1)NEELTK;NLS(1)NEELTK;NLS(1)NEELTK;NLS(1)NEELTK;NLS(1)NEELTK;NLS(1)NEELTK;NLS(1)NEELTK;NLS(0.998)NEELT(0.002)K 169.98 8.5881e-05 13641830000.0 18655380.0 17052530.0 15074920.0 14166610.0 15679670.0 15532620.0 14506220.0 15416160.0 19888180.0 15432980.0 True False 17620528.88282194 16233300.862430627 16046673.4639248 15513000.355053395 16913570.823881414 15435675.157047173 15972650.284664128 15362684.9391188 16276987.852218581 15296255.803876763 1.1519504582524112 1.0612597664793482 1.0490589115185853 1.0141697781441195 1.1057327388310771 1.009114606538881 1.0442196109596922 1.0043428363184932 1.0641158242197581 1.0 23.86667521946675 NLS(ph)PGAVESDVR ddPTM_KYSE-520_SHP099_60min_R1 7 NLSPGAVESDVR 12 0 A0A3B3IT15;P53621;P53621-2;A0A3B3IU78;A0A3B3ISK1;A0A3B3ITV3;A0A3B3ISC6;A0A3B3IS84 A0A3B3IT15 COPA Coatomer subunit alpha;Xenin;Proxenin 1 NLS(0.999)PGAVES(0.001)DVR;NLS(0.999)PGAVES(0.001)DVR;NLS(1)PGAVESDVR;NLS(1)PGAVESDVR;NLS(1)PGAVESDVR;NLS(0.998)PGAVES(0.002)DVR;NLS(1)PGAVESDVR 179.97 6.322500000000001e-07 5078320000.0 5462540.0 5381960.0 4862250.0 3284850.0 4544210.0 5202820.0 4412010.0 5114490.0 6104850.0 5356730.0 True False 5159522.016896483 5123402.563113339 5175678.414875068 3597041.156373833 4901813.473981927 5170347.27049191 4858019.027868108 5096749.027920934 4996363.130744824 5309273.539672874 0.9717943478222789 0.9649912600715262 0.9748374002960041 0.6775015695641595 0.923255024883112 0.9738332809295179 0.9150063547427301 0.9599710751077568 0.9410634229730553 1.0 22.340083041952397 -6.000032472129319 24.999999998105295 0.9523160213117605 0.894247467747375 0.10466148938217368 0.08294920776709164 3.1497940354696263 2427429.298284264 0.027417376946569455 0.03077785646961608 9.999252329542876e-07 6.000032472129319 -0.05806855356438556 NLS(ph)PTAVINITSEK ddPTM_KYSE-520_SHP099_60min_R1 5 NLSPTAVINITSEK 14 0 Q92870;Q92870-4;H0YAJ5;G5E9Y1;Q92870-2;D6RB55 Q92870 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 1 NLS(0.591)PT(0.409)AVINITSEK;NLS(0.982)PT(0.018)AVINITSEK;NLS(0.792)PT(0.208)AVINITSEK;NLS(0.978)PT(0.022)AVINITSEK;NLS(1)PTAVINITSEK 232.01 1.2613e-15 1616232000.0 2085560.0 2468570.0 1920200.0 1499030.0 1681490.0 2388400.0 1865210.0 2361000.0 2873440.0 2541920.0 True False 1969869.829339214 2349976.1918008868 2043979.1644286267 1641497.3605001965 1813813.6966306248 2373493.1096680053 2053763.6294953704 2352810.2420615433 2351695.7295277393 2519400.566383833 0.7818803629811927 0.9327521090359499 0.8112958263569845 0.6515428242743805 0.7199385920731307 0.9420864396624102 0.8151794743950525 0.9338769997335511 0.9334346276277912 1.0 21.264649087661713 -7.2719988036491685 0.9666254807541398 0.9862010130043324 0.7933513824612545 0.4362994616937308 0.08066406473486575 0.5994109935886623 1.0014862710727472 0.07845650127822944 0.0319600881357677 5.345658319632219e-08 7.2719988036491685 -0.1928496305430779 NLS(ph)PTAVINITSEKLEGK ddPTM_KYSE-520_SHP099_60min_R1 1 NLSPTAVINITSEKLEGK 18 1 Q92870;Q92870-4;H0YAJ5;G5E9Y1;Q92870-2;D6RB55 Q92870 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 1 NLS(0.982)PT(0.016)AVINIT(0.001)SEKLEGK 66.845 0.012492 445280000.0 163280.0 170390.0 140670.0 152030.0 140780.0 199990.0 149300.0 214980.0 231010.0 180970.0 True False 154222.53290938956 162204.20863939586 149737.81327995795 166478.88549051373 151858.58507137105 198741.78822747618 164392.7010275834 214234.28455670903 189064.40728819894 179366.74659252964 0.8598167488633743 0.9043159432884056 0.8348136771422842 0.9281479909356137 0.8466373391738585 1.1080191395730734 0.9165171591200066 1.1943924312982526 1.0540661013253456 1.0 17.452552923373723 -6.25770042508754 24.99894865703234 1.058118382605463 0.8771373679080638 0.6135964269700742 0.07132187112946699 218.17526479491187 1458740.04470839 0.023132146799535163 0.022301700496248796 5.524583918666091e-07 6.25770042508754 -0.18098101469739913 NLS(ph)SDEATNPISR ddPTM_KYSE-520_SHP099_60min_R1 3 NLSSDEATNPISR 13 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 NLS(0.972)S(0.028)DEATNPISR;NLS(0.958)S(0.042)DEATNPISR;NLS(0.616)S(0.384)DEATNPISR 248.81 3.5895999999999997e-16 397660000.0 1699210.0 1611860.0 1448430.0 1289410.0 1449000.0 1558960.0 1387310.0 1527600.0 1906670.0 1501050.0 True False 1604951.4340088428 1534423.8261488138 1541798.1153699392 1411955.1387247469 1563028.0563177755 1549229.9523731498 1527552.8336408378 1522301.112144522 1560466.7912392968 1487751.8647992292 1.078776287889533 1.0313707967396049 1.0363274628313126 0.9490528441819759 1.0505972758627358 1.0413228099581089 1.0267524240992834 1.0232224527239662 1.04887570848374 1.0 20.504702495450793 -4.209955446667292 2.2768057354978266 1.0223384990650646 1.0974948344676483 0.26631708009273236 0.02817517279648708 1.0495030678357338 5.695482230715464 0.0074901409274827765 0.16584310674644417 6.166582602554305e-05 4.209955446667292 0.07515633540258371 NLS(ph)STTDDEAPR ddPTM_KYSE-520_SHP099_60min_R1 2 NLSSTTDDEAPR 12 0 E9PDI4;O00515;A0A0J9YYF6;A0A0J9YVY2;A0A0J9YW63 E9PDI4 LAD1 Ladinin-1 1 NLS(0.765)S(0.205)T(0.015)T(0.015)DDEAPR;NLS(0.955)S(0.041)T(0.002)T(0.002)DDEAPR 155.06 3.1397e-05 655070000.0 1078840.0 1151570.0 1093790.0 881280.0 1176490.0 1498790.0 1319980.0 1713550.0 2001960.0 1812380.0 True False 1018994.5945857796 1096246.8486581913 1164297.4535258766 965036.5862335055 1269073.069687579 1489435.4956620785 1453416.4601633602 1707606.0949955755 1638454.5293047172 1796323.7232103047 0.5672666799526984 0.6102724327990452 0.6481556962600813 0.5372286597144293 0.7064834992100153 0.8291576158668271 0.809106087830251 0.9506115590033085 0.9121153988750695 1.0 20.776615937100622 -6.509210630770114 0.8330415816339568 0.9684869589062455 0.5814175784380937 0.9168548829218179 0.04547722092707306 0.16551958284530052 0.23864731014550078 0.03339895652511367 0.02471199874654124 3.0959174297321865e-07 6.509210630770114 -0.38706938046815176 NLSDIGWPVFEIPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 NLSDIGWPVFEIPSPR 16 0 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4;F5H1X6 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 1 NLSDIGWPVFEIPS(1)PR;NLSDIGWPVFEIPS(1)PR;NLSDIGWPVFEIPS(1)PR 203.81 8.3424e-13 315722000.0 328460.0 316136.0 238798.0 260890.0 266370.0 278651.0 279227.0 259056.0 314517.0 270349.0 True False 310239.66903122293 300948.3520301899 254191.30117030916 285684.9071605611 287331.8035620193 276911.83574866 307453.9901529076 258157.39520012465 257408.64112836015 267953.9181883395 1.157809787327542 1.1231347317663003 0.9486381199010612 1.0661717846564902 1.0723179773025728 1.0334308138536872 1.1474136755738884 0.9634395232790398 0.960645184323943 1.0 18.031625386621705 -4.58783985167621 8.433733418260928 1.030757436611161 1.149268797249738 0.39264191698963624 0.05814962237599227 0.24810797855149458 28.678493769475956 0.015223052189605549 0.04060016043091447 2.5832125879504367e-05 4.58783985167621 0.11851136063857703 NLSDIGWPVFEIPS(ph)PRPSK ddPTM_KYSE-520_SHP099_60min_R1 2 NLSDIGWPVFEIPSPRPSK 19 1 F5H4R1;J3KNB8;F5H538;Q9Y6R4-2;Q9Y6R4;F5H1X6 F5H4R1 MAP3K4 Mitogen-activated protein kinase kinase kinase 4 1 NLSDIGWPVFEIPS(0.994)PRPS(0.006)K;NLSDIGWPVFEIPS(0.976)PRPS(0.024)K 209.16 1.1854e-18 1117870000.0 335790.0 377370.0 306850.0 255563.0 284549.0 337170.0 257498.0 282270.0 411120.0 254463.0 True False 317163.0593192307 359240.57875608205 326630.04197735933 279851.6306821825 306941.3874376588 335065.5969631389 283528.41077830375 281290.8712523132 336470.9714918154 252208.65578921803 1.2575423247340805 1.4243784680265508 1.2950786362000937 1.109603593129916 1.2170136924015142 1.3285253668818096 1.12418191949471 1.115310140217394 1.3340976360978631 1.0 17.944258264178636 -13.999999999967415 0.04410428023408262 1.5892110978725073e-08 1.7928409013242261 0.3790623187070983 0.0978978014298216 753.9019384293055 2.468606134728219 95.81866496944993 25.459944644570083 1.000000000075031e-14 13.999999999967415 1.7928408854321152 NLSDS(ph)EKELYIQHAK ddPTM_KYSE-520_SHP099_60min_R1 2 NLSDSEKELYIQHAK 15 1 Q00059-2;Q00059 Q00059-2 TFAM Transcription factor A, mitochondrial 1 NLS(0.207)DS(0.793)EKELYIQHAK;NLS(0.049)DS(0.951)EKELYIQHAK 189.55 3.0751e-11 2140200000.0 1660080.0 1980080.0 1544420.0 1899890.0 1830530.0 1589590.0 1818000.0 1932820.0 2215400.0 1870310.0 True False 1567992.0531125658 1884953.9846393266 1643975.7843593713 2080454.9743772442 1974582.296709025 1579668.7791815302 2001781.1819701714 1926115.4985435817 1813139.205689259 1853740.5084791626 0.8458530446631771 1.0168381043718853 0.8868424554783638 1.1223010798226996 1.0651880819764805 0.8521520525424106 1.079860515975056 1.0390426760020455 0.9780976341595872 1.0 20.822007875136865 -3.3607666857368628 1.1439189010047355 1.0112310263789577 1.132101091559347e-16 0.25837555857533956 0.0793972877561081 15.522874834440215 3.5937361459723562 0.023770373770536573 30.71606667334701 0.0004357459048213259 3.3607666857368628 -1.0112310263789575 NLSELQDT(ph)SLQQLVSQR ddPTM_KYSE-520_SHP099_60min_R1 1 NLSELQDTSLQQLVSQR 17 0 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 NLSELQDT(0.5)S(0.5)LQQLVSQR 101.92 0.0036508 107820000.0 200540.0 217780.0 196550.0 173550.0 148920.0 171340.0 150580.0 187600.0 255280.0 236660.0 True False 189415.6464334211 207317.5219055554 209219.9274911192 190044.13982029006 160639.15676110645 170270.60350465422 165802.09591917958 186949.25938616937 208927.5870851109 234563.37651869416 0.8075243852840986 0.8838443792142149 0.891954791051726 0.8102038035129665 0.6848432996883632 0.7259044699635113 0.7068541491001497 0.7970095850460694 0.8907084737009652 1.0 17.83961825063592 -7.986851219861532 2.7036961614699884 0.9987686124203459 0.7872942717197916 0.5184189093973204 0.06486084213794596 0.23842822242895245 4.071590519648144 0.07298707819926943 0.019748222696938645 1.0307391694853109e-08 7.986851219861532 -0.21147434070055426 NLSES(ph)PVITK ddPTM_KYSE-520_SHP099_60min_R1 2 NLSESPVITK 10 0 E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-4;Q12830;F5GXF5;Q12830-2 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF 1 NLS(0.014)ES(0.984)PVIT(0.003)K;NLSES(0.999)PVITK 89.62899999999999 0.0037332999999999997 1139270000.0 1605700.0 1489160.0 1383500.0 1156310.0 1233910.0 1497600.0 1290610.0 1565810.0 1953480.0 1643420.0 True False 1516628.6201164061 1417618.5183252688 1472682.6236782672 1266205.354742721 1331011.6970124692 1488252.9228934871 1421077.4539397839 1560378.5705728019 1598777.2752233727 1628860.5773614114 0.9310978736886065 0.8703129893545994 0.9041182800702706 0.7773564983651609 0.8171428024666009 0.9136772929358421 0.8724365201604823 0.9579571095645624 0.9815310760441077 1.0 20.635431690709073 -7.364073448712279 1.4857225592303631 0.9988080398113444 0.8626304830813258 0.5878741426258082 0.04290147018974198 0.31433633158230245 1.2236855130958384 0.03874845357422528 0.013912126829094417 4.324406896548847e-08 7.364073448712279 -0.13617755673001852 NLSFDIPTGSLRDS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 NLSFDIPTGSLRDSR 15 1 Q5THJ4-2;Q5THJ4 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 NLSFDIPT(0.001)GSLRDS(0.999)R;NLSFDIPTGSLRDS(1)R;NLSFDIPTGSLRDS(1)R 176.48 1.0746e-08 1655735000.0 1992290.0 1998940.0 1754150.0 1845080.0 1907550.0 1803030.0 1639137.0 1885960.0 2372510.0 1878660.0 True False 1881773.7021683461 1902907.9219298898 1867225.3157392365 2020435.8484564722 2057663.3325251741 1791776.6209699821 1804836.9643955145 1879418.0449463746 1941721.990110062 1862016.5339753625 1.0106106298373208 1.0219608081928386 1.002797387492985 1.0850794348978674 1.1050725355977964 0.9622775030598575 0.9692915886961696 1.0093455190399734 1.042805987315553 1.0 20.828434452842984 -6.284647449986489 24.98613439761127 0.9956124354405322 1.0436889035049444 0.3103057470058904 0.03599807375779376 1132.4318382493261 1219188.6027180217 0.013988630029108733 0.012343927589574073 5.19221359545743e-07 6.284647449986489 0.048076468064412126 NLSFKPINGEEEAES(ph)IEEELNIDSHSDLK ddPTM_KYSE-520_SHP099_60min_R1 1 NLSFKPINGEEEAESIEEELNIDSHSDLK 29 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 NLSFKPINGEEEAES(1)IEEELNIDSHSDLK 313.04 7.288799999999998e-65 139230000.0 107320.0 116060.0 100730.0 96744.0 92041.0 103230.0 83532.0 110800.0 141450.0 104750.0 True False 101366.74566288397 110484.3033903883 107223.21697369842 105938.52067285577 99284.10305834677 102585.70327877578 91976.22975375826 110415.66066091435 115766.24566432525 103821.99649426683 0.9763513425450411 1.0641704756321977 1.0327601143715186 1.0203860862828409 0.9562915991875512 0.9880921841494416 0.8859031116670666 1.063509317767855 1.1150454583168992 1.0 16.663752610533702 -7.475250812206282 24.986721980246926 1.068108030089887 0.9922491885171054 0.2705839967795647 0.05226832318601969 487.89352697346334 255961.19023641516 0.02954892496137819 0.014194227956924741 3.3477204695639216e-08 7.475250812206282 -0.07585884157278167 NLSPS(ph)FSR ddPTM_KYSE-520_SHP099_60min_R1 1 NLSPSFSR 8 0 Q1ED39;H3BNU8 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 NLS(0.203)PS(0.797)FSR 123.38 0.0009038000000000001 250560000.0 343350.0 262390.0 244120.0 253260.0 277040.0 264260.0 268540.0 277630.0 323110.0 299740.0 True False 324303.69104874384 249784.39054458047 259856.3658058101 277329.7542546045 298841.47185802425 262610.6553177302 295686.6438978383 276666.966329329 264441.36894026236 297084.5367941911 1.0916209054441939 0.8407855664248914 0.8746882911170457 0.9335045076638507 1.0059139229621037 0.8839593543020952 0.9952946292276356 0.9312735335026655 0.8901216192327684 1.0 18.18051398950274 -5.528459294187143 24.845559306768696 0.9486197715205507 0.9225218799064452 0.0010469352096861284 0.07319039756407213 665.9808534242787 2965032.0757846185 0.021059397707135812 0.027268423893025365 2.9616975481439795e-06 5.528459294187143 -0.026097891614105473 NLSPT(ph)AVINITSEKLEGK ddPTM_KYSE-520_SHP099_60min_R1 1 NLSPTAVINITSEKLEGK 18 1 Q92870;Q92870-4;H0YAJ5;G5E9Y1;Q92870-2;D6RB55 Q92870 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 1 NLS(0.358)PT(0.642)AVINITSEKLEGK 72.935 0.036052 486390000.0 241370.0 270440.0 225990.0 178900.0 173990.0 247480.0 169730.0 230950.0 287940.0 209660.0 True False 227980.7249408341 257447.65646128438 240557.6769967847 195902.60221175375 187682.02313231878 245935.38552195538 186887.96480516932 230148.88835413533 235657.35437671116 207802.57551301195 1.0971024992255625 1.2389050319790853 1.1576260611924982 0.9427342357433243 0.9031746727343459 1.1835049922495098 0.8993534576931506 1.1075362650629137 1.1340444351805208 1.0 17.664854009606866 -5.146767648944367 6.9169735502238865 1.0254421391430268 1.1748060869360364 0.308995073815886 0.09595774830175699 0.29854094832992517 16.09771294347781 0.026058448440900536 0.045544417191053434 7.1323451429483685e-06 5.146767648944367 0.14936394779300954 NLTANDPSQEYVAS(ph)EGEEDPEVEFLK ddPTM_KYSE-520_SHP099_60min_R1 3 NLTANDPSQEYVASEGEEDPEVEFLK 26 0 Q86X95 Q86X95 CIR1 Corepressor interacting with RBPJ 1 1 NLTANDPSQEYVAS(1)EGEEDPEVEFLK;NLTANDPSQEY(0.002)VAS(0.997)EGEEDPEVEFLK;NLTANDPSQEYVAS(1)EGEEDPEVEFLK 242.57 3.064e-29 440488000.0 370910.0 435970.0 337829.0 300767.0 331874.0 391344.0 321496.0 394260.0 457940.0 407860.0 True False 350334.8829092458 415025.34679568885 359605.99788551155 329351.8052511038 357990.5956952423 388901.4769343138 353995.95317859337 392892.40408097574 374789.63972796756 404246.6777102782 0.866636393633714 1.0266635934931188 0.8895706946124603 0.8147297761767849 0.8855746142997681 0.9620400076931188 0.8756929189466356 0.9719125121977131 0.9271310325933653 1.0 18.624876391436672 -7.948142792687969 0.8071705220969602 0.9974560622769167 0.9040654966247225 0.20882749406308598 0.05643397681823816 1.1147709566404587 1.660177110956019 0.056384444795049095 0.021019376891465862 1.1268269032355805e-08 7.948142792687969 -0.09339056565219428 NLVS(ph)PAMR ddPTM_KYSE-520_SHP099_60min_R1 1 NLVSPAMR 8 0 Q14686 Q14686 NCOA6 Nuclear receptor coactivator 6 1 NLVS(1)PAMR 64.266 0.057086000000000005 0.0 123080.0 137460.0 79763.0 94126.0 96614.0 136850.0 117090.0 160330.0 176760.0 169890.0 True False 116252.50704610297 130856.21526833344 84904.65060531223 103071.7067399862 104216.97214153611 135995.8683880699 128926.59988827696 159773.85265130343 144664.83975698912 168384.90677242 0.6903974309480339 0.777125561765412 0.5042295787238508 0.6121196294587874 0.6189211024856888 0.8076488029409584 0.7656660110429447 0.9488608908828461 0.8591318695357318 1.0 17.361403302268364 -6.857971130932345 1.12385594253491 0.9454063455898213 0.6391476143107006 0.7072310483569317 0.07983488211988944 0.2936040704838323 0.7216642510376665 0.060270949566783416 0.03143548839650978 1.386848014428357e-07 6.857971130932345 -0.30625873127912073 NLVS(ph)PAYCTQESR ddPTM_KYSE-520_SHP099_60min_R1 1 NLVSPAYCTQESR 13 0 Q9NUQ3 Q9NUQ3 TXLNG Gamma-taxilin 1 NLVS(0.999)PAY(0.001)CTQESR 94.48700000000001 0.0021574000000000003 490390000.0 264850.0 238650.0 217530.0 121200.0 200200.0 234220.0 238500.0 309850.0 301110.0 233000.0 True False 250158.24253461463 227184.8957790472 231552.3318603058 132718.8115598914 215954.6010178187 232758.14610050264 262609.90753569093 308775.20266953396 246436.01436539346 230935.8012712572 1.0832371644307275 0.9837577999099231 1.0026697055443752 0.5747000284464333 0.93512829032584 1.0078911317310428 1.1371554609119672 1.3370607803977808 1.067119143107351 1.0 17.817132321488632 -6.603183997046547 2.7047957131677314 1.1653560731921013 0.907989069073116 0.3163343692162909 0.1496603997858165 0.3111294466463245 4.616096474998767 0.06652319775685209 0.049690146595746956 2.493538068699874e-07 6.603183997046547 -0.2573670041189853 NLYPSSS(ph)PYTR ddPTM_KYSE-520_SHP099_60min_R1 7 NLYPSSSPYTR 11 0 Q9Y2Z0-2;Q9Y2Z0 Q9Y2Z0-2 SUGT1 Suppressor of G2 allele of SKP1 homolog 1 NLYPS(0.077)S(0.337)S(0.586)PYTR;NLYPS(0.006)S(0.022)S(0.972)PYTR;NLYPS(0.016)S(0.021)S(0.962)PYTR;NLYPS(0.039)S(0.176)S(0.785)PYTR;NLYPS(0.003)S(0.015)S(0.981)PYTR;NLYPS(0.003)S(0.015)S(0.982)PYTR;NLYPS(0.193)S(0.375)S(0.43)PYT(0.002)R 204.85 1.3551999999999999e-07 5892670000.0 8080010.0 7583510.0 6783650.0 6498380.0 6806550.0 7055560.0 6647210.0 7013530.0 8197200.0 7007530.0 True False 7631795.738199404 7219186.796519417 7220934.933223767 7115984.081390806 7342186.761028127 7011523.632912898 7319174.857317914 6989201.701400203 6708795.114596014 6945448.735975837 1.0988196772180387 1.0394125809504113 1.0396642762361739 1.0245535388565514 1.0571220147371152 1.009513409348889 1.0538087797561964 1.0062995159978267 0.9659268061177946 1.0 22.7276364771022 -1.0000000001147422 0.18840696395870693 0.9870495986501999 1.3983091276082624 0.5649897916615643 0.023069912297796296 44.572009674868944 0.5174700920703587 0.04882000286150346 5.318983348421459 0.09999999997357963 1.0000000001147422 0.4112595289580625 NLYSDDIPHALR ddPTM_KYSE-520_SHP099_60min_R1 2 NLYSDDIPHALR 12 0 P60228;H0YBR5;E5RIT4 P60228 EIF3E Eukaryotic translation initiation factor 3 subunit E 0 ; 125.82 0.00015958 1016950000.0 1302810.0 1256760.0 809100.0 826780.0 1182760.0 1197910.0 922930.0 990680.0 948730.0 1038850.0 False True 1230540.5322126532 1196383.3631647802 861255.8806057726 905356.922619528 1275836.4830161578 1190433.3993478478 1016228.7713287856 987243.5623064499 776464.547537046 1029646.5972130697 1.195109599296827 1.1619359170447556 0.8364577544731582 0.8792889959234995 1.2391013445481653 1.156157270436262 0.9869685133514723 0.958817874966623 0.7541078168360794 1.0 19.973717819416393 -7.248445096728778 2.5621688904678837 0.8794507129215701 1.0677028395315813 0.24199123297700365 0.13674017152095289 0.46265446232704555 5.905636655101493 0.09392226508899101 0.04186068772658595 5.643582827014283e-08 7.248445096728778 0.18825212661001123 NMAPGAVCS(ph)PGESK ddPTM_KYSE-520_SHP099_60min_R1 11 NMAPGAVCSPGESK 14 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NMAPGAVCS(1)PGESK;NMAPGAVCS(1)PGESK;NMAPGAVCS(1)PGESK;NMAPGAVCS(1)PGESK;NMAPGAVCS(1)PGESK;NMAPGAVCS(1)PGESK;NMAPGAVCS(1)PGESK;NMAPGAVCS(1)PGESK;NMAPGAVCS(1)PGESK;NMAPGAVCS(1)PGESK;NMAPGAVCS(1)PGESK 264.64 9.7924e-25 13925820000.0 14400690.0 14567810.0 11426440.0 10118300.0 11274190.0 15439220.0 12879180.0 16035190.0 18458450.0 16678720.0 True False 13601855.018636214 13867950.540871382 12163006.605350414 11079940.189822188 12161404.611633755 15342858.101092137 14181133.203083947 15979567.66853149 15106860.779658265 16530959.516647825 0.8228109811132379 0.8389077794852375 0.7357713624004355 0.6702539062335685 0.735674453705266 0.9281287081757603 0.8578529993254512 0.9666448975595733 0.9138526269116204 1.0 23.978667130507468 -6.2659400649683645 24.635670239497536 0.9264959847410091 0.7586215803757387 0.7033300328921368 0.0559578944038177 200.43490263075628 1097128.6574272716 0.02108466518437449 0.01922180833330516 5.420756946727187e-07 6.2659400649683645 -0.16787440436527046 NMAPSQQS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 2 NMAPSQQSPVR 11 0 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H7C3Q7 ABI2 Abl interactor 2 1 NMAPSQQS(1)PVR;NMAPSQQS(1)PVR 225.63 4.2273000000000005e-10 1067770000.0 600220.0 577680.0 450790.0 446270.0 477580.0 570280.0 418730.0 505100.0 625710.0 484900.0 True False 566924.6000910935 549927.3856846424 479848.64468950185 488683.36662403174 515162.8289415069 566720.6709853748 461059.3148109847 503347.92599122564 512096.83686549915 480604.1632464916 1.1796081753880479 1.1442418267246603 0.9984279816639827 1.0168105147549389 1.0719067131286812 1.179183857162544 0.9593327525432136 1.0473232745032823 1.0655272592860492 1.0 18.87448962034332 -4.63011309325068 5.640108021603158 1.0463518812007184 1.170842034321387 0.4223881802235654 0.05633398188453427 0.18958642101046858 8.488686378318029 0.01477163591248968 0.04067350239703286 2.343618441594178e-05 4.63011309325068 0.12449015312066858 NMAS(ph)LY(ph)GQLDT(ph)TK ddPTM_KYSE-520_SHP099_60min_R1 2 NMASLYGQLDTTK 13 0 Q9Y2I2-2;Q9Y2I2-1;Q9Y2I2-5;Q9Y2I2-4;Q9Y2I2-6;Q9Y2I2 Q9Y2I2-2 NTNG1 Netrin-G1 3 NMAS(1)LY(0.974)GQLDT(0.564)T(0.462)K;NMAS(1)LY(0.998)GQLDT(0.8)T(0.203)K 67.648 0.013587 877920000.0 2654960.0 2528310.0 1767230.0 2782630.0 3219310.0 1795700.0 1716710.0 2735550.0 2281550.0 1513380.0 True False 2507684.076268455 2406846.1925293193 1881148.473467975 3047090.318571787 3472651.38163173 1784492.3702189054 1890251.8002750343 2726061.015532169 1867278.0331950563 1499972.6305918235 1.6718198886595903 1.6045934062008074 1.2541218653608073 2.0314306117502547 2.3151431638199784 1.1896832874309333 1.2601908606353862 1.8174071712605748 1.2448747364532313 1.0 20.516504745998873 -8.121979702641438 0.5940288295782254 0.9907476439563371 1.6909157034817366 0.2719865996382287 0.3415382278606827 1.5228032665766116 1.2257190227345092 0.39697160044871654 0.16606906232870336 7.551275187789212e-09 8.121979702641438 0.7001680595253995 NMGGPYGGGNYGPGGS(ph)GGSGGYGGR ddPTM_KYSE-520_SHP099_60min_R1 1 NMGGPYGGGNYGPGGSGGSGGYGGR 25 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 NMGGPYGGGNYGPGGS(0.493)GGS(0.493)GGY(0.013)GGR 131.56 3.9237999999999997e-07 311000000.0 535230.0 444740.0 410120.0 384120.0 418420.0 460750.0 425670.0 437120.0 546180.0 444010.0 True False 505539.72494544677 423374.0228316506 436556.9914152014 420626.6493101112 451347.27351586265 457874.28834346565 468700.8777388584 435603.7327445746 447007.48007734935 440076.4168345529 1.1487544108402084 0.9620466051713433 0.9920026947940848 0.955803658681956 1.0256111353623092 1.0404426841068466 1.0650442964206075 0.9898365740155992 1.015749681140951 1.0 18.7473945359501 NMGGPYGGGNYGPGGSGGS(ph)GGYGGR ddPTM_KYSE-520_SHP099_60min_R1 6 NMGGPYGGGNYGPGGSGGSGGYGGR 25 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 NMGGPYGGGNYGPGGS(0.025)GGS(0.975)GGYGGR;NMGGPYGGGNYGPGGS(0.01)GGS(0.99)GGYGGR;NMGGPYGGGNYGPGGS(0.015)GGS(0.985)GGYGGR;NMGGPYGGGNYGPGGSGGS(1)GGYGGR;NMGGPYGGGNYGPGGSGGS(1)GGYGGR;NMGGPYGGGNYGPGGSGGS(1)GGYGGR 453.82 1.3550999999999996e-149 8898670000.0 3471630.0 3220990.0 2772960.0 3075110.0 2800640.0 2981240.0 2809900.0 3149940.0 3857470.0 2902810.0 True False 3279051.7633771743 3066248.8055954394 2951709.4384928737 3367367.5298344623 3021034.4345381777 2962632.9753251728 3093952.113981294 3139013.5933415247 3157050.6869053706 2877093.3617520053 1.1397098915762667 1.0657453269880155 1.025934534392527 1.1704060683605708 1.050030031941167 1.0297312609699527 1.0753742492726175 1.091036403292114 1.0973056101950356 1.0 21.456180606651362 NMPGLSAATLASLGGTS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 2 NMPGLSAATLASLGGTSSR 19 0 Q32MZ4-2;Q32MZ4;Q32MZ4-4;C9JTC6;Q32MZ4-3 Q32MZ4-2;Q32MZ4-3 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NMPGLSAATLASLGGT(0.009)S(0.496)S(0.496)R;NMPGLSAATLASLGGT(0.138)S(0.431)S(0.431)R 417.41 1.8934e-107 10058770000.0 2123730.0 1927220.0 1902810.0 1515070.0 1429250.0 1727690.0 1505920.0 1764630.0 1952780.0 1559470.0 True False 2005922.4633492024 1834633.4583838019 2025468.177203644 1659061.7972775926 1541723.8436799059 1716906.845855934 1658153.089962884 1758508.910397738 1598204.3775778052 1545654.3090493013 1.2977820794761037 1.1869623418655917 1.3104276715337895 1.0733718319577201 0.9974570863961082 1.1107961436163345 1.0727839208644128 1.1377116474895081 1.0339985909014975 1.0 20.559786260910954 -5.273279244179043 23.89377790370152 1.0665460829799693 1.2572478570302656 0.7649258959909089 0.05174967576863221 187.38449695874073 378156.62822128163 0.014085005764662312 0.021101559415720225 5.329920801824983e-06 5.273279244179043 0.1907017740502963 NMPGLSAATLASLGGTSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 5 NMPGLSAATLASLGGTSSR 19 0 Q32MZ4-2;Q32MZ4;Q32MZ4-4;C9JTC6;Q32MZ4-3 Q32MZ4-2;Q32MZ4-3 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NMPGLSAATLASLGGT(0.031)S(0.051)S(0.918)R;NMPGLSAATLASLGGT(0.009)S(0.226)S(0.765)R;NMPGLSAATLASLGGT(0.03)S(0.256)S(0.715)R;NMPGLSAATLASLGGT(0.09)S(0.329)S(0.581)R;NMPGLSAATLASLGGT(0.25)S(0.25)S(0.499)R 303.37 1.6789e-44 10662287000.0 2579310.0 2382650.0 2303500.0 2080120.0 2030240.0 2245430.0 1824561.0 2123060.0 2622340.0 1998960.0 True False 2436230.532572988 2268183.9175694375 2451987.295730311 2277813.9793891166 2190008.3375145635 2231415.438470035 2009005.4318793605 2115695.600385929 2146189.15981185 1981250.7695673492 1.2296426933905968 1.144824245577326 1.2375956306963392 1.1496848427150534 1.1053665548822984 1.1262660298965157 1.0140086569243691 1.0678585633296378 1.0832496283549804 1.0 20.917980064955163 -6.0097290069060785 0.8499822432686781 1.0428313377325544 1.2064329526390694 0.7520063444374965 0.03764100509741283 0.3078575477443451 0.49030518264514344 0.02130388194864842 0.0262841801259763 9.778471922758548e-07 6.0097290069060785 0.16360161490651492 NMS(ph)LKWAK ddPTM_KYSE-520_SHP099_60min_R1 1 NMSLKWAK 8 1 F8W1Z7 F8W1Z7 ATP2A2 1 NMS(1)LKWAK 51.268 0.044405 595480000.0 398960.0 318850.0 283630.0 329890.0 366200.0 400120.0 397420.0 366530.0 476890.0 610110.0 True False 376828.8934929576 303531.96739639284 301913.2436240457 361242.6464149545 395017.85660701816 397622.7026630217 437595.09204542736 365258.5929787447 390298.79741859337 604704.9000583976 0.6231616338094275 0.5019505669080574 0.49927368472603634 0.597386669729431 0.6532407072753511 0.6575483390735257 0.7236506467917954 0.6040278372863706 0.6454368029445461 1.0 19.205871743952667 -13.999999999267306 0.16112575986345387 2.4631407253249207 0.5063441592995424 0.821913771049387 0.05634145451739627 56.63146224879912 0.5217985219114273 26.440198826705565 0.2567987151014345 1.0000000016870901e-14 13.999999999267306 -1.9567965660253783 NMS(ph)PDEIKIPPEPPGR ddPTM_KYSE-520_SHP099_60min_R1 6 NMSPDEIKIPPEPPGR 16 1 J3KS14;F5H478;J3KRU5;J3QLH3;J3QQJ0;Q9UHR5;X6R3T8;Q9UHR5-2 J3KS14 SAP30BP SAP30-binding protein 1 NMS(1)PDEIKIPPEPPGR;NMS(1)PDEIKIPPEPPGR;NMS(1)PDEIKIPPEPPGR;NMS(1)PDEIKIPPEPPGR;NMS(1)PDEIKIPPEPPGR;NMS(1)PDEIKIPPEPPGR 127.58 5.1891e-05 1945240000.0 3487760.0 3289660.0 3081290.0 2841240.0 3100460.0 3020710.0 2759140.0 2945100.0 3905600.0 3044130.0 True False 3294287.0001228144 3131619.7957196687 3279914.883638313 3111270.595350046 3344448.5627957312 3001856.628414517 3038060.797811435 2934884.135491511 3196441.492163932 3017161.3764972994 1.0918497849615314 1.0379357962467513 1.0870863286225847 1.031191311007037 1.108475200845368 0.9949274347066744 1.0069268490167398 0.9727302484889601 1.059420128158595 1.0 21.524760432148202 -6.279761546723024 24.751644131861198 1.0051044375557925 1.0681015958270927 0.5357349808650287 0.029929920133208037 562.6357638087678 760069.4568170595 0.009812447120743535 0.008670439477849215 5.250956896088065e-07 6.279761546723024 0.06299715827130026 NMS(ph)Y(ph)QGFT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 NMSYQGFTK 9 0 A0A6I8PTV8;A0A6I8PIP7;A0A6I8PS05;A0A6I8PLB8;A0A6I8PRS0;A0A6I8PL42;B4DER1;A0A6I8PIT3;A0A6I8PIV1;Q9P2J5-2;Q9P2J5;A0A6I8PRU9 A0A6I8PTV8 LARS Leucine--tRNA ligase, cytoplasmic 3 NMS(1)Y(1)QGFT(1)K 51.841 0.041693 1836200000.0 2095400.0 2246000.0 2391700.0 2489100.0 2315100.0 1629100.0 1731900.0 1962300.0 2795500.0 1678000.0 True False 1979163.9849236598 2138098.788685269 2545872.808855304 2725663.315624794 2497285.1988828764 1618932.1826160392 1906977.353715152 1955493.2393042615 2287907.668820227 1663134.2254642441 1.1900205976286728 1.285584023194787 1.5307680942857478 1.6388715197439687 1.501553609231864 0.9734224440989623 1.146616625716329 1.1757879847361141 1.375660264691856 1.0 20.665473177274173 -6.247692708776421 24.909414685520666 1.1460541562423343 1.4386454092036947 0.4717002779962758 0.1557284676824569 755.9766088164827 1369854.6685341368 0.05581854436930899 0.05552537663352658 5.653368454360213e-07 6.247692708776421 0.29259125296136035 NMTVEQLLTGS(ph)PT(ph)SPTVEPEKPTR ddPTM_KYSE-520_SHP099_60min_R1 1 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 2 NMT(0.007)VEQLLT(0.2)GS(0.791)PT(0.514)S(0.449)PT(0.04)VEPEKPTR 69.439 0.013153 100690000.0 165050.0 157030.0 151150.0 152470.0 156100.0 151260.0 150810.0 143010.0 180820.0 152700.0 True False 155894.347480982 149486.04309316477 160893.3708485509 166960.70295822292 168384.18191249462 150315.9302329518 166055.34656376345 142513.93168878488 147987.6461012604 151347.19679880238 1.0300444988632627 0.9877027540317659 1.0630746670679272 1.103163497505519 1.1125688844857882 0.9931860874356231 1.0971815142669195 0.9416357534407442 0.9778023592864552 1.0 17.20750242874384 -7.2673948654502505 24.986325653923014 0.9697892898570302 1.0546331388019161 0.43671124432491426 0.042688299474466014 478.3196419715345 2006780.1715958465 0.023693844224699195 0.011834137201820921 5.4026288644857574e-08 7.2673948654502505 0.08484384894488595 NMTVEQLLTGS(ph)PTS(ph)PTVEPEKPTR ddPTM_KYSE-520_SHP099_60min_R1 7 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 2 NMTVEQLLT(0.154)GS(0.843)PT(0.167)S(0.816)PT(0.019)VEPEKPTR;NMTVEQLLT(0.019)GS(0.975)PT(0.042)S(0.96)PT(0.004)VEPEKPTR;NMTVEQLLTGS(0.996)PT(0.009)S(0.98)PT(0.015)VEPEKPTR;NMTVEQLLT(0.001)GS(0.992)PT(0.047)S(0.941)PT(0.02)VEPEKPTR;NMTVEQLLT(0.001)GS(0.995)PT(0.007)S(0.977)PT(0.02)VEPEKPTR;NMTVEQLLT(0.011)GS(0.987)PT(0.116)S(0.871)PT(0.015)VEPEKPTR;NMTVEQLLT(0.032)GS(0.906)PT(0.091)S(0.787)PT(0.183)VEPEKPTR 184.75 3.5734e-15 4736890000.0 1780210.0 1698210.0 1512720.0 1551540.0 1666020.0 1672100.0 1525230.0 1663300.0 1961060.0 1579560.0 True False 1681458.2025393483 1616625.442534824 1610232.3516375762 1698997.8951124894 1797126.295642885 1661663.8036659977 1679415.1332103224 1657530.4005171373 1604980.9382996229 1565566.3272790865 1.0740255288076352 1.0326138307691357 1.0285302663836149 1.0852289459146094 1.147908117547625 1.0613819259602537 1.0727205254402106 1.0587417291976904 1.0251759445344215 1.0 20.578253200770778 -7.849304842534893 1.9375310215007455 1.0002053755502205 1.0717560661543055 0.37746336684105275 0.030822652179316064 0.37295262778857297 2.9022524107596532 0.03242798819502963 0.009304953091255395 1.414800346366226e-08 7.849304842534893 0.07155069060408503 NMTVEQLLTGS(ph)PTSPTVEPEKPTR ddPTM_KYSE-520_SHP099_60min_R1 2 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLT(0.002)GS(0.869)PT(0.112)S(0.015)PT(0.003)VEPEKPTR;NMTVEQLLTGS(0.989)PT(0.01)S(0.001)PTVEPEKPTR 240.16 1.2829e-28 2170400000.0 1053530.0 1069210.0 781790.0 755500.0 762790.0 944140.0 699190.0 798320.0 1161170.0 810860.0 True False 995088.5907400128 1017843.5466830697 832185.4343082272 827302.4928506429 822817.2333185907 938247.2720490503 769870.948636812 795550.8142492891 950330.7987136407 803676.4112395345 1.2381707075429245 1.266484287019472 1.0354732609667145 1.0293975053649629 1.0238165781791886 1.1674440843696818 0.9579364752654824 0.9898894668592885 1.182479397706742 1.0 19.616255212320382 -4.761813910648304 24.999645005016912 1.047421214695909 1.2523275590692986 0.5829724662611216 0.06902030266892709 6.192222388390602 413461.83821046236 0.017561262208748325 0.040583347919228976 1.7305577211091757e-05 4.761813910648304 0.20490634437338962 NMTVEQLLTGSPTS(ph)PTVEPEKPTR ddPTM_KYSE-520_SHP099_60min_R1 6 NMTVEQLLTGSPTSPTVEPEKPTR 24 1 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 NMTVEQLLTGSPT(0.173)S(0.796)PT(0.03)VEPEKPTR;NMTVEQLLTGS(0.001)PT(0.194)S(0.736)PT(0.069)VEPEKPTR;NMTVEQLLTGSPT(0.059)S(0.883)PT(0.059)VEPEKPTR;NMTVEQLLTGSPT(0.06)S(0.939)PT(0.001)VEPEKPTR;NMTVEQLLTGSPT(0.008)S(0.969)PT(0.023)VEPEKPTR;NMTVEQLLTGSPT(0.249)S(0.748)PT(0.003)VEPEKPTR 231.07 2.4675e-22 3918530000.0 1664100.0 1893700.0 1569440.0 1177491.0 1314887.0 1830510.0 1548059.0 1993520.0 2514560.0 2132580.0 True False 1571789.0556988919 1802723.8094983478 1670608.6135927865 1289399.3906144213 1418361.1262163646 1819085.1080967898 1704551.911319893 1986604.9444110673 2057979.2908991557 2113687.0003221342 0.743624318765903 0.8528811546949031 0.7903765379349824 0.6100238069392071 0.6710364997278219 0.8606217986956224 0.8064353478353761 0.9398765967280401 0.9736442957663606 1.0 21.01133032423036 -7.164870952841534 1.2550849369458306 0.9963154922514431 0.7435182790375511 0.6769670010548983 0.06868642363879075 0.3167012114382361 0.8997674192028478 0.06206842609355881 0.025442578748234704 6.841148963949049e-08 7.164870952841534 -0.25279721321389204 NMVDLVNTHHLHS(ph)S(ph)S(ph)DDEDDRLK ddPTM_KYSE-520_SHP099_60min_R1 1 NMVDLVNTHHLHSSSDDEDDRLK 23 1 Q9UPN7 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 3 NMVDLVNT(0.237)HHLHS(0.851)S(0.961)S(0.951)DDEDDRLK 60.348 0.038234 845080000.0 211580.0 206790.0 175560.0 208490.0 179500.0 188470.0 188210.0 177430.0 229350.0 162910.0 True False 199843.23562572664 196855.49800188188 186876.8785059319 228304.8269151959 193625.62878470757 187293.6888206031 207236.1035525888 176814.53674247314 187705.82144300445 161466.7441420623 1.2376742758242514 1.219170542193405 1.1573706988326535 1.4139433363091032 1.1991672329402463 1.1599520992125638 1.2834599759456196 1.0950523445676683 1.1625045295881882 1.0 17.300877530985773 -7.971820136559075 0.6982140274090021 1.0014294565525421 1.2444217855028745 0.48397764937433174 0.07529006932001314 0.6433731065900896 0.7289056333057953 0.07396711290303669 0.029751915958121114 1.0670379444345933e-08 7.971820136559075 0.2429923289503324 NMVVDDDS(ph)PEMYK ddPTM_KYSE-520_SHP099_60min_R1 1 NMVVDDDSPEMYK 13 0 Q0ZGT2-4;Q0ZGT2-2;Q0ZGT2;E7ETM8;E7EUA0;H7BXY5;Q0ZGT2-3 Q0ZGT2-4 NEXN Nexilin 1 NMVVDDDS(1)PEMYK 195.38 1.7254e-08 276190000.0 214020.0 212040.0 162500.0 164540.0 172850.0 207440.0 156980.0 174570.0 201100.0 178330.0 True False 202147.88396170756 201853.2801214713 172975.0100091928 180177.8321292452 186452.31161803173 206145.2900140388 172849.07037716042 173964.45741494416 164585.30931845715 176750.13493864075 1.1436929540782739 1.142026172662019 0.9786414594209023 1.019392897164092 1.0548920468024485 1.1663090955240438 0.9779289302221206 0.9842394602716221 0.9311750136744922 1.0 17.431351790887234 -6.88803909409106 10.386529182406697 0.9708708933696153 1.077667077449896 0.47222904200299176 0.057171360757558985 0.33226240154786507 29.01726252533508 0.025775590902911195 0.017373956812448802 1.2940793464563434e-07 6.88803909409106 0.10679618408028069 NNAYLAQS(ph)PQLYK ddPTM_KYSE-520_SHP099_60min_R1 1 NNAYLAQSPQLYK 13 0 P14868;P14868-2 P14868 DARS Aspartate--tRNA ligase, cytoplasmic 1 NNAYLAQS(1)PQLYK 193.77 1.9508000000000002e-08 800630000.0 695930.0 654370.0 535060.0 549870.0 536160.0 681220.0 497360.0 604640.0 806110.0 617920.0 True False 657325.3755979391 622933.0829706045 569550.8237262691 602129.4794755559 578352.7416669003 676968.2532942711 547638.0025658337 602542.6449640363 659740.7443794213 612445.7095344854 1.0732794194893887 1.0171237601518843 0.929961325321684 0.9831556823758784 0.9443330774682073 1.1053522667483926 0.894182119394858 0.9838302980716833 1.0772232282937937 1.0 19.224222436010276 NNESQWKDS(ph)PLATR ddPTM_KYSE-520_SHP099_60min_R1 6 NNESQWKDSPLATR 14 1 O95155-2;O95155;O95155-4;O95155-3;K7EP75 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 NNESQWKDS(0.999)PLATR;NNESQWKDS(1)PLATR;NNESQWKDS(1)PLATR;NNESQWKDS(1)PLATR;NNESQWKDS(1)PLATR;NNESQWKDS(1)PLATR 176.11 8.691399999999998e-09 9408090000.0 4314670.0 3730350.0 3479060.0 3682830.0 4111450.0 3896080.0 3916200.0 4302660.0 4662670.0 4208630.0 True False 4075326.65401859 3551138.3866304965 3703325.77429282 4032845.0559167834 4434997.724049499 3871763.1195425 4312087.714428814 4287735.0767083885 3816046.6643455597 4171344.8124645953 0.9769814861243097 0.8513173919401651 0.8878014023742978 0.9667973368842695 1.0632057342267822 0.9281810288070885 1.0337404142528948 1.0279023359315687 0.9148240761450954 1.0 21.9920811428008 -5.396064514708036 4.51860685535571 0.9961264152921612 0.9006590279391745 0.37011036551398047 0.05171242831469665 0.22138317590089185 7.1248912722216575 0.014361115981159477 0.021651134859779295 4.017311290138998e-06 5.396064514708036 -0.09546738735298665 NNHHEENIS(ph)S(ph)KMK ddPTM_KYSE-520_SHP099_60min_R1 1 NNHHEENISSKMK 13 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3;A0A1B0GV13 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 2 NNHHEENIS(1)S(1)KMK 53.038000000000004 0.046934 811390000.0 1537200.0 1337300.0 1196400.0 1186500.0 1402300.0 1329200.0 1174800.0 1312900.0 1674400.0 1315900.0 True False 1451928.4516677703 1273054.100671776 1273521.858307681 1299264.6032657684 1512653.0320044286 1320903.969758294 1293560.2489431007 1308345.8563331624 1370371.168189086 1304242.1497547077 1.1132353389597462 0.976087224992079 0.9764458682363514 0.9961835718237787 1.1597946227155114 1.012775097022221 0.9918098791596208 1.0031464299625852 1.0507030220168971 1.0 20.314780319121468 -9.860223262024714 9.295089963859937 0.9999989674178292 1.028140760546466 0.022976916548640314 0.058023124552226156 0.0 0.0 0.057231053937759485 0.013880569438282586 1.3796748192938741e-10 9.860223262024714 0.02814179312863685 NNLNPVWRPFK ddPTM_KYSE-520_SHP099_60min_R1 1 NNLNPVWRPFK 11 1 A0A087WYQ3;H0YB26;O75131 A0A087WYQ3 CPNE3 Copine-3 0 83.86200000000001 0.0057104 266790000.0 631020.0 600500.0 523480.0 416350.0 609010.0 652630.0 543460.0 531040.0 590110.0 575690.0 False True 596016.062692817 571651.078631124 557224.3583976135 455919.77881980815 656935.6222071014 648556.6940891929 598398.240458477 529197.9461856678 482960.89946253016 570589.8344800428 1.0445613059965293 1.0018599072169736 0.9765760354027184 0.7990324244652393 1.1513272450879577 1.1366425668627596 1.048736245018762 0.9274577186744066 0.8464239463758312 1.0 19.12209451880497 -7.330929469444811 6.143172558058324 0.9132168624500344 1.0207320040658696 0.17229296905144686 0.09767628696050126 0.43869901353163526 30.475540521267472 0.05841289963434088 0.027645091511395468 4.66735173167601e-08 7.330929469444811 0.1075151416158352 NNRPAFFS(ph)PSLK ddPTM_KYSE-520_SHP099_60min_R1 2 NNRPAFFSPSLK 12 1 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 NNRPAFFS(0.712)PS(0.288)LK;NNRPAFFS(0.999)PS(0.001)LK 141.65 5.2116999999999996e-05 1082560000.0 1045390.0 996660.0 827800.0 918940.0 1057830.0 957230.0 904010.0 1035880.0 1078900.0 912720.0 True False 987400.1327666993 948778.9575828398 881161.3125268307 1006275.7813106138 1141075.2027706236 951255.5725035599 995396.1530873798 1032286.7740562108 882998.9568557118 904634.010885416 1.0914912781139805 1.0487986811972907 0.9740528234886823 1.1123567865038761 1.2613666842503406 1.0515363794165917 1.1003302342271322 1.1411098429141018 0.9760841912095161 1.0 19.786974711411375 -3.7751525766759473 17.45021985716171 1.081704405408004 83.3282997328626 0.0 0.08276897353630402 4419.80143425637 343125.0436393488 0.020463020308012315 4483.489813102465 0.00016782143229783044 3.7751525766759473 82.2465953274546 NNRPAFFS(ph)PSLKR ddPTM_KYSE-520_SHP099_60min_R1 2 NNRPAFFSPSLKR 13 2 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 NNRPAFFS(0.889)PS(0.111)LKR;NNRPAFFS(0.953)PS(0.047)LKR 118.71 8.3283e-05 5233200000.0 2935400.0 2507900.0 2305930.0 2239300.0 2384370.0 2515700.0 2063850.0 2433900.0 2997800.0 2252880.0 True False 2772567.5104251727 2387416.7195653515 2454573.93741845 2452122.3987299027 2572006.3537904904 2499998.583148468 2272484.0992349493 2425457.3689765306 2453475.088388222 2232921.2359141163 1.2416772548137531 1.0691898492281515 1.0992657949323472 1.0981678884548964 1.1518571781317486 1.1196089422854252 1.0177179842640696 1.086226119383738 1.0987736821732608 1.0 21.09050093174286 NNRPSEGPLQTR ddPTM_KYSE-520_SHP099_60min_R1 4 NNRPSEGPLQTR 12 1 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ;;; 179.46 7.834e-07 1864130000.0 940350.0 786030.0 665420.0 624960.0 839760.0 885120.0 673990.0 801490.0 751360.0 640640.0 False True 888186.9109587482 748267.9389449161 708314.0379096436 684356.0104989237 905844.3344191979 879595.6377614067 742123.4867085131 798709.8182591727 614931.9642442374 634964.4280103773 1.398797903910662 1.1784407219307835 1.1155176678622813 1.0777863771728313 1.4266064277925086 1.3852675818668558 1.1687638771102693 1.2578812025137875 0.9684510456295788 1.0 19.276316245895618 -7.760924492136119 24.999596871065016 0.9842254032592695 1.2459856157632299 0.4631929996961377 0.11482704692334161 12.824971291951789 622969.2984579799 0.09560275089913382 0.031074277018184042 1.73410546881376e-08 7.760924492136119 0.2617602125039603 NNS(ph)FTAPSTVGK ddPTM_KYSE-520_SHP099_60min_R1 3 NNSFTAPSTVGK 12 0 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;O95453-4 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 1 NNS(0.964)FT(0.036)APSTVGK;NNS(0.999)FT(0.001)APSTVGK;NNS(0.998)FT(0.002)APSTVGK 280.5 6.7569e-23 1797430000.0 2831450.0 2365730.0 2278900.0 1803390.0 1823070.0 3169990.0 2489240.0 3098680.0 3474780.0 2785330.0 True False 2674383.8241443583 2252076.7797668776 2425801.540368921 1974783.6433910278 1966535.2371506195 3150204.9165619174 2740876.67184127 3087931.402317349 2843847.5440755277 2760654.1431539515 0.9687500445416055 0.8157765018670387 0.8787053410455563 0.7153317804362506 0.7123439355948882 1.1411081407549726 0.9928359474649415 1.1185506195968085 1.0301353942245481 1.0 21.396578726641405 -6.264606049233195 24.99747700531143 1.0599548075079022 0.8156964672608457 0.6788046171281288 0.08195023783623558 168.54147093140324 1330449.4386669302 0.028841320587793862 0.026504012908187102 5.437433402445283e-07 6.264606049233195 -0.2442583402470565 NNS(ph)NTCNIENELEDSRK ddPTM_KYSE-520_SHP099_60min_R1 5 NNSNTCNIENELEDSRK 17 1 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 NNS(0.979)NT(0.021)CNIENELEDSRK;NNS(0.999)NT(0.001)CNIENELEDSRK;NNS(0.989)NT(0.011)CNIENELEDSRK;NNS(0.945)NT(0.055)CNIENELEDSRK;NNS(0.996)NT(0.004)CNIENELEDSRK 184.38 2.349e-12 1104940000.0 1224430.0 1121280.0 1027350.0 947347.0 1088456.0 1096690.0 1014449.0 1047258.0 1368380.0 1033672.0 True False 1156508.4270593086 1067412.0257244068 1093574.6248181178 1037382.5740497382 1174111.2947325213 1089845.1509135002 1116999.4049881517 1043625.3064298551 1119916.6860526619 1024514.470264648 1.1288356198234706 1.0418711074414377 1.0674076907236172 1.0125601972042095 1.1460172880029993 1.0637674552629564 1.0902719653140804 1.018653554166268 1.093119441996139 1.0 19.966508930473353 -13.999986071403036 0.2775107630393754 0.48307724082028025 1.076150711518859 0.22642953349970651 0.040988025737996904 345.8681701905346 3.3313215155733933 102.73993248107342 0.04646394906297167 1.0000320722940402e-14 13.999986071403036 0.5930734706985789 NNS(ph)PPTVGAFGHTR ddPTM_KYSE-520_SHP099_60min_R1 1 NNSPPTVGAFGHTR 14 0 Q86XL3;F5H1D4;Q86XL3-3 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 NNS(1)PPTVGAFGHTR 209.12 1.0927999999999999e-13 418150000.0 449680.0 464280.0 420360.0 397620.0 409720.0 349980.0 354250.0 412900.0 532010.0 329360.0 True False 424735.3539851437 441975.2919015126 447457.0781997802 435409.6852511877 441962.6330120906 347795.6450015107 390061.0471468281 411467.7462715845 435410.394880718 326442.1266382027 1.3011046042347343 1.3539162253753967 1.3707087464716186 1.333803604746621 1.3538774470181043 1.0654128760378228 1.1948857555971462 1.2604615418634864 1.3338057785761375 1.0 18.316467720380896 -6.228711296984873 24.693095730769656 1.1886903105838238 1.3443700593456498 0.47454837089778934 0.08939136192856145 555.0313108735807 418767.13539346674 0.02947342541432678 0.029471015036077457 5.905935546021634e-07 6.228711296984873 0.155679748761826 NNS(ph)RVSPVPLSGAAAGTEQK ddPTM_KYSE-520_SHP099_60min_R1 1 NNSRVSPVPLSGAAAGTEQK 20 1 Q96JM2;Q96JM2-3;H3BLX4;Q96JM2-2;H0Y6H9 Q96JM2 ZNF462 Zinc finger protein 462 1 NNS(0.614)RVS(0.385)PVPLS(0.001)GAAAGTEQK 56.688 0.030444 0.0 243260.0 290760.0 223190.0 192590.0 179040.0 257600.0 173750.0 222570.0 300570.0 260380.0 True False 229765.88287321234 276791.45316034235 237577.18451662606 210893.69569570493 193129.42940174937 255992.22284813164 191314.34563658814 221797.95661822858 245994.06475310127 258073.23577257435 0.8903127136968682 1.0725306416674039 0.9205804848589169 0.8171854592529458 0.7483512531766123 0.9919363473774685 0.7413180412291296 0.8594380426712936 0.953194793782809 1.0 17.97742100478645 -4.998257339737479 24.64737920768592 0.862041588674056 0.9852051797819293 0.16519528298482844 0.09505940926637038 68.61967416423128 970438.7525557359 0.02382072437078782 0.04902155537428662 1.0040206848952667e-05 4.998257339737479 0.12316359110787334 NNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPS(ph)PHTLR ddPTM_KYSE-520_SHP099_60min_R1 2 NNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLR 38 0 Q68EM7-2;Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-7 Q68EM7-2;Q68EM7-3 ARHGAP17 Rho GTPase-activating protein 17 1 NNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPS(1)PHTLR;NNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPS(0.995)PHT(0.005)LR 254.15 9.131099999999999e-32 855930000.0 103468.0 160892.0 183295.0 522220.0 97408.0 122282.0 121778.0 91517.0 128614.0 103703.0 True False 97728.4237816556 153162.50681618435 195110.48898236942 571851.6317888324 105073.45542429389 121518.79267979533 134088.50867874784 91199.54888722835 105260.93969509717 102784.27209971307 0.9508110704607345 1.4901356373628678 1.8982523784678735 5.5636102694200895 1.0222717277441051 1.1822703045647638 1.304562516614078 0.8872908960113455 1.0240957837691493 1.0 16.649259996753646 NNT(ph)AAETEDDES(ph)DGEDRGGGTSGVR ddPTM_KYSE-520_SHP099_60min_R1 1 NNTAAETEDDESDGEDRGGGTSGVR 25 1 A0A590UJS4;Q6KC79-2 A0A590UJS4 NIPBL Nipped-B-like protein 2 NNT(0.807)AAET(0.193)EDDES(1)DGEDRGGGTSGVR 85.274 0.0029017 328940000.0 250380.0 230990.0 189290.0 232900.0 204990.0 194140.0 194710.0 208060.0 246910.0 219430.0 True False 236490.9222798445 219892.89367694152 201491.9362747083 255034.74597606182 221121.54676644638 192928.30024742373 214393.18698647575 207338.28842156884 202077.36809458112 217486.02091395686 1.087384473199804 1.0110667929500483 0.9264592520841777 1.1726489128097122 1.0167161357645502 0.8870836821450294 0.9857791598996392 0.953340759788866 0.9291510656426428 1.0 17.730563148013168 -6.014980331581166 24.688466772825542 0.9504990863287476 1.044973077045307 0.34489064661687696 0.0644013656676085 703.8921236103826 1160056.414220277 0.020895786412284748 0.021634400910537005 9.660946306936808e-07 6.014980331581166 0.09447399071655938 NNTAAET(ph)EDDES(ph)DGEDRGGGTSGSLR ddPTM_KYSE-520_SHP099_60min_R1 2 NNTAAETEDDESDGEDRGGGTSGSLR 26 1 Q6KC79 Q6KC79 NIPBL Nipped-B-like protein 2 NNT(0.455)AAET(0.545)EDDES(0.999)DGEDRGGGTSGSLR;NNT(0.002)AAET(0.998)EDDES(1)DGEDRGGGTSGSLR 100.37 0.0023846999999999996 40238000.0 48668.0 44272.0 40547.0 46130.0 41708.0 40728.0 42960.0 46544.0 50289.0 42249.0 True False 45968.28902274727 42145.10666637322 43160.724497493815 50514.18133050978 44990.1823139419 40473.80144471547 47302.816049196146 46382.54972745129 41157.785282525576 41874.7067292246 1.09775787374448 1.0064573571558868 1.0307110871625924 1.2063172563130011 1.0743999380070401 0.9665453111452735 1.129627399066254 1.1076507359771106 0.9828793679359985 1.0 15.353791466084239 -7.771318895128467 24.993139958081898 0.991439618978204 1.075748641182394 0.22637725111078688 0.06352688211041214 362.3536552703954 916647.9848457804 0.06056197167672131 0.0164011510357882 1.693094133375575e-08 7.771318895128467 0.08430902220419001 NNTAAETEDDES(ph)DGEDRGGGTSGSLR ddPTM_KYSE-520_SHP099_60min_R1 1 NNTAAETEDDESDGEDRGGGTSGSLR 26 1 Q6KC79 Q6KC79 NIPBL Nipped-B-like protein 1 NNTAAETEDDES(1)DGEDRGGGTSGSLR 144.51 9.7104e-07 69076000.0 18487.0 24604.0 28419.0 14161.0 19419.0 25138.0 16613.0 12022.0 18517.0 20128.0 True False 17461.489257079174 23421.986908643077 30250.93421200771 15506.857182340105 20947.16482100407 24981.104417532362 18292.4041672555 11980.298487955888 15154.77957558366 19949.68157934703 0.8752765896352067 1.1740531704972554 1.5163617570380212 0.7772984807132775 1.0499999580288883 1.2522056714626526 0.9169271246009645 0.6005257998883816 0.7596501986915266 1.0 14.284078099051552 -6.985298622295057 6.581381646094692 0.7588825929397309 1.1103324777816184 0.32161322204859355 0.21028359193473317 0.16572008780241224 30.918509624627042 0.09218607758913615 0.05979941786646544 1.0344306442170754e-07 6.985298622295057 0.35144988484188744 NNTAAETEDDES(ph)DGEDRGGGTSGVR ddPTM_KYSE-520_SHP099_60min_R1 4 NNTAAETEDDESDGEDRGGGTSGVR 25 1 A0A590UJS4;Q6KC79-2 A0A590UJS4 NIPBL Nipped-B-like protein 1 NNTAAETEDDES(0.999)DGEDRGGGTSGVR;NNTAAETEDDES(1)DGEDRGGGTSGVR;NNTAAETEDDES(1)DGEDRGGGTSGVR;NNTAAETEDDES(1)DGEDRGGGTSGVR 124.9 0.00010038 909002000.0 539727.8 556853.0 465706.9 424952.39999999997 539655.0 499208.5 473316.1 429266.8 537129.0 380572.9 True False 509788.0230133058 530100.9460266061 495727.11193138594 465339.748329402 582122.7782830717 496092.75457950943 521163.51050798234 427777.7736624245 439599.9135202068 377201.32018723595 1.3515011632521758 1.405352838541163 1.3142242229834082 1.2336641560491244 1.543268135949568 1.315193579739482 1.3816587657998816 1.1340834476668409 1.1654251721653501 1.0 18.52497519982481 -7.559252446786382 1.3559323932088 1.0288504731622905 1.3675399574151867 0.6750576483267048 0.0840972718936996 0.24647760691179804 0.8190156055110377 0.07567108599642534 0.025029672566068233 2.7589736532432628e-08 7.559252446786382 0.33868948425289624 NNTVIDELPFKS(ph)PITK ddPTM_KYSE-520_SHP099_60min_R1 2 NNTVIDELPFKSPITK 16 1 Q9UQC2-2;Q9UQC2 Q9UQC2-2 GAB2 GRB2-associated-binding protein 2 1 NNTVIDELPFKS(1)PITK;NNTVIDELPFKS(1)PITK 205.55 3.0323e-13 1707790000.0 1105570.0 908790.0 803315.0 1186360.0 1591320.0 3434650.0 2930190.0 4215770.0 4760850.0 3936900.0 True False 1044241.8282008457 865130.3642783994 855097.970249445 1299111.2977078587 1716547.830627747 3413213.075331273 3226402.2010985613 4201146.477838117 3896399.6512619467 3902022.128861855 0.26761555770710893 0.22171334136711862 0.21914226573052795 0.3329328370792158 0.4399123772084889 0.8747292974288801 0.8268538964025919 1.0766588038452543 0.998559086182951 1.0 21.89579052900067 -6.225462130237675 1.3004561037759645 1.0107729159526258 0.22914334762232685 0.9709479813374489 0.058099896406076365 0.06292330956647582 0.21666918703479 0.026577389788124222 0.02471229169811255 5.950286400126137e-07 6.225462130237675 -0.781629568330299 down NNTVTPGGKPNK ddPTM_KYSE-520_SHP099_60min_R1 2 NNTVTPGGKPNK 12 1 C9K025;P18077 C9K025 RPL35A 60S ribosomal protein L35a 0 ; 115.12 0.00017108 1215180000.0 1338230.0 1616220.0 1190910.0 1170220.0 1354760.0 1532400.0 1196470.0 1521110.0 1745560.0 1409650.0 False True 1263995.7142046343 1538574.3652043226 1267677.9641233718 1281437.3569605292 1461371.9044700274 1522835.723185082 1317420.8640219225 1515833.6244397438 1428610.3059867048 1397161.597691105 0.9046882739215454 1.1012143246328205 0.9073237957715752 0.9171718998562391 1.0459576808330788 1.0899495990311079 0.9429266207996563 1.0849379391365692 1.0225089984920648 1.0 20.414067463875863 -5.780651148833145 24.996729922198426 1.0338328476767114 0.9642666343327125 0.22746319713286267 0.06573380002431763 387.6052926406305 504317.112518165 0.020160541016258075 0.022894453707390582 1.6571005107324827e-06 5.780651148833145 -0.06956621334399882 NPDDITNEEYGEFYK ddPTM_KYSE-520_SHP099_60min_R1 4 NPDDITNEEYGEFYK 15 0 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;;; 327.58 1.0573e-42 2536590000.0 1193700.0 1680230.0 1401120.0 863630.0 1301670.0 1575900.0 1195450.0 1352030.0 1401720.0 1623660.0 False True 1127483.0814180458 1599509.2287233528 1491438.4370712654 945709.1355401722 1404104.0235108072 1566064.2235495762 1316297.752467682 1347340.1234961755 1147202.9824856694 1609275.635588364 0.7006152684377335 0.9939311783208347 0.9267762489463054 0.5876613767251957 0.8725068549226221 0.9731485327415714 0.8179442497968553 0.8372339043109773 0.712869167416583 1.0 20.617980020332197 NPDDITNEEYGEFYKS(ph)LTNDWEDHLAVK ddPTM_KYSE-520_SHP099_60min_R1 2 NPDDITNEEYGEFYKSLTNDWEDHLAVK 28 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 1 NPDDITNEEYGEFY(0.003)KS(0.979)LT(0.018)NDWEDHLAVK;NPDDITNEEYGEFYKS(0.979)LT(0.021)NDWEDHLAVK 188.54 1.7157e-15 199173000.0 141522.0 163456.0 140985.0 105844.0 103214.0 124964.0 96706.0 114249.0 160350.0 109168.0 True False 133671.49254288746 155603.32840754197 150073.11868397566 115903.38193684103 111336.3545926728 124184.05332295777 106481.98623960806 113852.69688491704 131234.48209455304 108200.85645141882 1.2354014277410523 1.4380970124520818 1.3869864214185503 1.0711872875875117 1.0289784965118256 1.147717840650506 0.9841140794242925 1.0522347106932175 1.2128784040954066 1.0 16.72335239313319 -5.2645264997648 24.43375375294912 1.0710157202460353 1.3619551738193363 0.7259929545464201 0.0794753084506793 93.31438252421718 738561.932320481 0.02160027441228584 0.03364744360768306 5.438429465189673e-06 5.2645264997648 0.290939453573301 NPDDITQEEYGEFYK ddPTM_KYSE-520_SHP099_60min_R1 8 NPDDITQEEYGEFYK 15 0 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;;;;;;; 325.29 1.8893e-42 2684040000.0 1621897.0 2035750.0 1713669.0 1009454.0 1734670.0 1985940.0 1547416.0 1580352.0 1900920.0 1879720.0 False True 1531927.140238489 1937949.5142769543 1824134.845707345 1105392.2046565884 1871178.6600778196 1973545.01181296 1703843.9106048183 1574870.1277689287 1555760.846293593 1863067.1432000329 0.8222608325361948 1.0401930608621557 0.9791031162592363 0.5933185009950579 1.0043538510715477 1.0592989195350033 0.9145370400758985 0.8453104513796037 0.8350535577700083 1.0 20.82924823792267 -11.539562705095806 2.077329158847858 2.2760342365245867 0.9034236258124404 0.050198657662255286 0.13032459236944 7202867.301172431 347401.5890280075 43707233.21659236 0.03362877135844238 2.886936922118287e-12 11.539562705095806 -1.3726106107121463 NPDTQWITKPVHK ddPTM_KYSE-520_SHP099_60min_R1 2 NPDTQWITKPVHK 13 1 A0A2R8YEM3;E7EQV9;E7ENU7;P61313 A0A2R8YEM3 RPL15 Ribosomal protein L15;60S ribosomal protein L15 0 ; 194.12 1.8811e-08 1731940000.0 3425900.0 2458700.0 2253800.0 1928180.0 3640700.0 2679900.0 2538400.0 2399800.0 2357410.0 2038770.0 False True 3235858.4976376668 2340580.3614160614 2399083.554207503 2111433.6474715415 3927202.3772506095 2663173.7500415696 2795006.2443966377 2391475.653917529 1929363.7694700377 2020708.08393906 1.6013488159704183 1.1582971236763004 1.1872489516302909 1.0448979069533022 1.943478332404714 1.3179408600425457 1.3831816018413714 1.183483984116951 0.9547958880379392 1.0 20.94642949110523 -7.5329205534666865 2.708662909145806 0.9754696644873081 1.367819486494017 0.3085284348842341 0.23922729140195653 0.37547157466080117 5.277593908075895 0.19741720603128576 0.06679639026080547 2.9314294496385667e-08 7.5329205534666865 0.39234982200670887 NPEAALS(ph)PTFR ddPTM_KYSE-520_SHP099_60min_R1 1 NPEAALSPTFR 11 0 F5H6D8;B4DTN4;Q86U44;B4E349 F5H6D8 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 NPEAALS(0.907)PT(0.093)FR 85.90899999999999 0.0035631 732580000.0 542170.0 558340.0 507900.0 379830.0 462630.0 500140.0 452090.0 550060.0 606780.0 481450.0 True False 512094.74931089964 531516.5083145736 540640.0466687323 415928.92899994686 499036.3489953715 497018.44074248744 497791.66917321034 548151.9702449687 496604.0476790331 477184.7275624322 1.0731582964249418 1.1138590101776318 1.1329785205625593 0.8716308485491692 1.0457927929599975 1.041564015012321 1.043184411445947 1.1487206915549315 1.0406956027612182 1.0 18.864188344329694 NPEAALSPT(ph)FR ddPTM_KYSE-520_SHP099_60min_R1 1 NPEAALSPTFR 11 0 F5H6D8;B4DTN4;Q86U44;B4E349 F5H6D8 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 NPEAALS(0.296)PT(0.704)FR 147.39 0.00031773 718670000.0 636430.0 590410.0 552850.0 520640.0 519090.0 616910.0 538370.0 612490.0 691660.0 646550.0 True False 601125.9592082493 562045.8173765225 588487.5955912755 570121.4690638758 559939.4297819153 613059.6358588549 592793.6935848631 610365.4151462399 566071.9793297078 640822.0700082881 0.938054395037416 0.8770700069197885 0.9183322846288116 0.889672025585046 0.873782998414323 0.9566768445583121 0.925051931462342 0.9524725250775862 0.8833528148030021 1.0 19.28956430967284 -6.2679931037436045 24.96509370655584 0.9393866753341702 0.8986560803304889 0.3109392168124322 0.0325486807721092 671.9556186965618 2559671.2940676967 0.010677424543100182 0.009650149736240099 5.395191895894891e-07 6.2679931037436045 -0.04073059500368126 NPEDKS(ph)PQLSLSPR ddPTM_KYSE-520_SHP099_60min_R1 2 NPEDKSPQLSLSPR 14 1 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785 M0QXA7 WIZ Protein Wiz 1 NPEDKS(0.996)PQLS(0.004)LSPR;NPEDKS(0.772)PQLS(0.056)LS(0.171)PR 98.508 0.001492 405630000.0 417730.0 393580.0 382550.0 321690.0 346650.0 349860.0 381650.0 429780.0 481860.0 431310.0 True False 394557.68417589035 374671.8260243759 407209.7851016418 352263.32088037475 373929.3828313028 347676.39396602276 420230.9065450585 428289.1934914061 394366.37070209713 427488.9289541023 0.9229658535046 0.8764480215687712 0.952562177687091 0.8240291081741576 0.8747112673681663 0.8132991766983312 0.9830217301140375 1.0018720123097966 0.9225183250171108 1.0 18.705527532213512 -6.785296827031541 24.98282894819967 0.9770090801349066 0.8781726065783474 0.5576954504833661 0.04341362631606922 180.80813623429148 189335.20626005298 0.018193759816429934 0.012273662440687538 1.63946886322831e-07 6.785296827031541 -0.09883647355655922 NPEDKS(ph)PQLSLSPRPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 NPEDKSPQLSLSPRPASPK 19 2 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785 M0QXA7 WIZ Protein Wiz 2 NPEDKS(0.718)PQLS(0.142)LS(0.141)PRPAS(0.999)PK 63.361000000000004 0.011331 982650000.0 800040.0 867070.0 823580.0 714230.0 831710.0 756760.0 650360.0 785060.0 1178300.0 841330.0 True False 755660.1863597991 825414.655701397 876669.2845745916 782110.2044589212 897160.8452174318 752036.7801341313 716104.7357019372 782336.8100943812 964350.4225257981 833876.4707448349 0.9062015932465736 0.9898524357739946 1.0513179293709214 0.9379209414079342 1.0758917857654264 0.9018563378606873 0.8587659693315227 0.9381926910536073 1.1564667625942502 1.0 19.669474155176967 -7.743363771477362 24.9992270252556 1.0782334258009165 0.9598534672233894 0.307664803196367 0.07237583978521979 264.27157338044185 365500.0982175189 0.05040934546093314 0.018969724503656832 1.8056610440294643e-08 7.743363771477362 -0.11837995857752714 NPEDKSPQLSLS(ph)PRPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 NPEDKSPQLSLSPRPASPK 19 2 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785 M0QXA7 WIZ Protein Wiz 2 NPEDKSPQLS(0.006)LS(0.994)PRPAS(1)PK;NPEDKSPQLS(0.004)LS(0.996)PRPAS(1)PK 140.21 2.3514e-06 2140230000.0 2153500.0 1965650.0 2067140.0 1667060.0 1872270.0 1869040.0 1647470.0 1830020.0 2851800.0 1959380.0 True False 2034041.0621041828 1871217.223499197 2200391.151940939 1825496.8811801355 2019606.9972409124 1857374.6280748162 1814012.3453577552 1823672.0877498789 2333985.008027728 1942021.4175745717 1.047383434444578 0.9635409818683651 1.133041650327961 0.9399983257960327 1.03995093924517 0.9564130504773358 0.9340846238571923 0.9390586896963775 1.20183278459549 1.0 20.88912768092486 -7.7455172441444375 24.999626776965357 1.1009165049728196 0.9942481588965926 0.24382460226250036 0.07518444767340644 285.1105922920672 447661.2652104976 0.04928314410961239 0.018497457299727075 1.7967297376086718e-08 7.7455172441444375 -0.106668346076227 NPEVGLKPVWYSPK ddPTM_KYSE-520_SHP099_60min_R1 2 NPEVGLKPVWYSPK 14 1 P07814;V9GYZ6 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 0 ; 151.48 9.940200000000001e-05 384960000.0 606070.0 501770.0 358000.0 358210.0 571770.0 585800.0 433720.0 444240.0 412840.0 441770.0 False True 572450.0889294079 477664.21602787485 381077.2528202527 392254.17070023634 616765.0460737165 582143.8049085233 477564.65029928664 442699.03512639564 337878.66284948733 437856.2614918595 1.3073927205676166 1.090915576724613 0.8703250046530111 0.8958514590239085 1.4086016355510842 1.3295317575796421 1.090688183085776 1.0110601904333534 0.7716657098799284 1.0 18.740097817170156 -7.428414828852487 3.091466872900278 0.8865999306944127 1.137729851849601 0.2585320012188198 0.173552079101149 0.40787365122434116 7.323044364806943 0.1317327626316902 0.05189357091854024 3.7289380739957626e-08 7.428414828852487 0.2511299211551884 NPFRGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 NPFRGSPK 8 1 Q14966;Q14966-3;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LPI0;A0A096LNQ0;A0A096LNR2;A0A096LNX0 Q14966 ZNF638 Zinc finger protein 638 1 NPFRGS(1)PK;NPFRGS(1)PK 117.99 0.0015307 1537520000.0 2763200.0 2602200.0 2720300.0 2255710.0 2300380.0 2168460.0 1927630.0 2101320.0 3134400.0 2257500.0 True False 2609919.7876973613 2477186.406018166 2895654.8906338904 2470092.000196059 2481406.8186282194 2154925.836790607 2122493.6522558643 2094031.0113717734 2565271.9717939943 2237500.3063084213 1.1664444381701036 1.1071222645351029 1.2941472599891335 1.103951580802857 1.1090084822031652 0.9630952142062267 0.9486003851135544 0.935879653498974 1.1464901097718072 1.0 21.09345644920257 -5.950945854737038 2.1316267431036886 0.9925635748701312 1.1773209161413507 0.5443638201965139 0.07330691374391306 0.2356579829033882 2.1707355657498693 0.02604709949591448 0.02947764215262894 1.1195774570506093e-06 5.950945854737038 0.18475734127121946 NPGFEIIHGLLDR ddPTM_KYSE-520_SHP099_60min_R1 1 NPGFEIIHGLLDR 13 0 Q9NSD9-2;Q9NSD9 Q9NSD9-2 FARSB Phenylalanine--tRNA ligase beta subunit 0 79.652 0.017802000000000002 73489000.0 70668.0 61341.0 45733.0 38843.0 69374.0 70990.0 46542.0 40491.0 51786.0 39741.0 False True 66747.90516683456 58394.086285281875 48681.02235538717 42534.62704142619 74833.33911593474 70546.92507759649 51246.919566147284 40350.54617167043 42382.9678188246 39388.92565803016 1.6945855732733541 1.4825001014816246 1.235906324991696 1.0798625839837985 1.8998573295862051 1.791034507771963 1.3010489296170904 1.024413474030466 1.0760122829139427 1.0 15.265502447200326 -7.060675374805819 4.200970851625643 1.0460064532223097 1.5142427889934014 0.4803920200311511 0.23071191323733742 0.23156059401619075 8.145202055680906 0.12493668879205086 0.07162818780069029 8.696102001507934e-08 7.060675374805819 0.4682363357710917 NPLPNIDHELQELLIDRGEDVPS(ph)EEEEEEENGFEDR ddPTM_KYSE-520_SHP099_60min_R1 2 NPLPNIDHELQELLIDRGEDVPSEEEEEEENGFEDR 36 1 Q9ULX3 Q9ULX3 NOB1 RNA-binding protein NOB1 1 NPLPNIDHELQELLIDRGEDVPS(1)EEEEEEENGFEDR;NPLPNIDHELQELLIDRGEDVPS(1)EEEEEEENGFEDR 198.39 6.7679e-16 104185000.0 41623.0 58010.0 50023.0 31088.1 39016.0 40291.1 25484.0 33121.5 73859.0 32054.8 True False 39314.08921660661 55223.11252521479 53247.56261962986 34042.7036770219 42086.33722932671 40039.62829967533 28060.171419872324 33006.60924711621 60448.067433873366 31770.819410257045 1.2374276127078505 1.738170860880796 1.67598959070093 1.0715085197340357 1.3246852933147626 1.2602642627073302 0.8832057825620085 1.0388970086323992 1.9026285300768169 1.0 14.955414679039617 -5.258741843361283 24.9457654479773 1.2062758545524597 1.5692935120940137 0.22118798058327682 0.2906859377401527 336.00989625910273 3107272.138194735 0.07950113355117529 0.13011793067874808 5.511352090494825e-06 5.258741843361283 0.363017657541554 NPLPPILGS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 2 NPLPPILGSPTK 12 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 NPLPPILGS(0.993)PT(0.007)K;NPLPPILGS(0.819)PT(0.181)K 118.21 0.00013822 2012080000.0 1350210.0 1340750.0 941100.0 861010.0 912310.0 1412170.0 1089670.0 1356560.0 1566910.0 1377650.0 True False 1275311.1597230951 1276338.3574932215 1001764.8118132406 942840.1315279045 984103.6066661631 1403356.1232121368 1199824.4777543661 1351854.4099834857 1282398.6425866939 1365445.0927954807 0.9339893390455898 0.9347416195844018 0.7336544084407846 0.690500216012073 0.7207200141980108 1.027764595307923 0.8787057671414389 0.9900467013403148 0.9391799416564122 1.0 20.38093987101849 -6.26413995871016 24.999831669014988 0.9609902185838846 0.7999840571479996 0.4803852563383608 0.08535656442678592 249.78279464653076 2312281.5826260103 0.0326758737318059 0.03012779424050466 5.443272059651825e-07 6.26413995871016 -0.16100616143588498 NPNQSSQVMDPPTARPTEPES(ph)PKNDR ddPTM_KYSE-520_SHP099_60min_R1 1 NPNQSSQVMDPPTARPTEPESPKNDR 26 2 Q15025-4;Q15025-3;Q15025 Q15025-4 TNIP1 TNFAIP3-interacting protein 1 1 NPNQSSQVMDPPT(0.004)ARPT(0.004)EPES(0.992)PKNDR 57.076 0.032760000000000004 648530000.0 206360.0 176850.0 145540.0 157380.0 179820.0 174640.0 179560.0 199360.0 267780.0 213980.0 True False 194912.79943153894 168353.86054273814 154921.74127223334 172337.3478819778 193970.81096415644 173550.00698058124 197711.67713672385 198668.46669097376 219157.90218446773 212084.30367392066 0.9190345351121181 0.7938063195925238 0.7304724517021557 0.8125888851583578 0.9145929595166378 0.8183067015058981 0.9322315405326049 0.9367429048234812 1.0333527676872434 1.0 17.694278325622342 -7.0474929106299715 0.9258648113108918 1.0177163800376021 0.8162643220325912 0.6371184548743691 0.05517538912788498 0.37985037492925516 0.5979199337538774 0.048415123938197434 0.022606589875275234 8.964108187311332e-08 7.0474929106299715 -0.20145205800501087 NPPENSDSGT(ph)GKK ddPTM_KYSE-520_SHP099_60min_R1 1 NPPENSDSGTGKK 13 1 P55010;H0YN40 P55010 EIF5 Eukaryotic translation initiation factor 5 1 NPPENS(0.001)DS(0.167)GT(0.831)GKK 63.918 0.036085 0.0 340120.0 255080.0 240410.0 231480.0 254240.0 267360.0 239190.0 214540.0 296060.0 306660.0 True False 321252.86558758974 242825.57391711438 255907.2132696001 253479.7896030004 274247.24157227855 265691.3070678434 263369.6594694421 213795.81081401263 242302.96706525332 303943.23097786977 1.056950222428149 0.7989175252756151 0.8419572709228481 0.8339708332621376 0.9022975793537136 0.8741478012622313 0.8665093761822192 0.7034070478430203 0.7971981027039076 1.0 18.21344236378099 -7.030634199408374 24.875778780356878 0.8071731802169904 0.8767718586058255 0.02982878665607691 0.09501424430980779 1534.072266599722 1245701.0613979734 0.04253428077951805 0.024598754071585186 9.318924658957275e-08 7.030634199408374 0.06959867838883516 NPPS(ph)PRPSQLPVLDR ddPTM_KYSE-520_SHP099_60min_R1 9 NPPSPRPSQLPVLDR 15 1 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 NPPS(1)PRPSQLPVLDR;NPPS(1)PRPSQLPVLDR;NPPS(1)PRPSQLPVLDR;NPPS(1)PRPSQLPVLDR;NPPS(1)PRPSQLPVLDR;NPPS(1)PRPSQLPVLDR;NPPS(1)PRPSQLPVLDR;NPPS(1)PRPSQLPVLDR;NPPS(0.97)PRPS(0.03)QLPVLDR 155.86 1.1837e-06 18620500000.0 6184330.0 6393030.0 5288700.0 4192190.0 4810790.0 6004070.0 4791680.0 5921290.0 7292250.0 6346690.0 True False 5841272.886743789 6085899.242666339 5629618.064219185 4590614.477172117 5189371.8033492 5966596.372033318 5276069.776690231 5900750.4270294765 5968161.222662949 6290463.2642501015 0.9285918447280112 0.967480293105543 0.8949449075099722 0.7297736723559696 0.8249586056469618 0.9485146198917683 0.8387410521376284 0.9380470371021102 0.9487633854538415 1.0 22.584734838324636 -7.7209331647021315 1.449293910568114 0.9963070006036495 0.8747650198395058 0.27583746632982653 0.06586001997859425 0.5705458432579097 2.3412153361609667 0.06777424229301164 0.021094249783304844 1.9013708669022346e-08 7.7209331647021315 -0.12154198076414369 NPPSTEVVIKEESS(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 1 NPPSTEVVIKEESSPKK 17 2 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 NPPSTEVVIKEES(0.179)S(0.821)PKK 70.917 0.01083 882490000.0 444430.0 375780.0 358810.0 326390.0 408300.0 401490.0 360500.0 401220.0 589280.0 446930.0 True False 419776.58195075934 357726.96474272094 381939.4667162982 357410.0074672686 440430.88709078555 398984.1519848462 396942.85814095056 399828.261465452 482281.60653993336 442970.5479062788 0.9476399366387972 0.8075637679153486 0.862223162513971 0.806848241167689 0.9942667501767395 0.9007013081810148 0.8960931150324095 0.9026068738774149 1.0887441813444712 1.0 18.756851254928012 -7.702292596752302 6.908778894351818 1.043646999007868 0.8867310030942782 0.5374590957306155 0.05737895532857277 0.1437996344838945 13.249928138242584 0.04055597986755427 0.014775007694844954 1.984757278427081e-08 7.702292596752302 -0.15691599591358985 NPQMPQYSS(ph)PQPGSALSPR ddPTM_KYSE-520_SHP099_60min_R1 1 NPQMPQYSSPQPGSALSPR 19 0 O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 NPQMPQY(0.074)S(0.125)S(0.497)PQPGS(0.012)ALS(0.292)PR 56.817 0.0422 569560000.0 183500.0 193940.0 187350.0 202730.0 142620.0 208990.0 157430.0 170720.0 247100.0 201860.0 True False 173320.88920181882 184622.83129012535 199426.8807705985 221997.39824700312 153843.3826032033 207685.6158890957 173344.5607687373 170127.8121663477 202232.86888409156 200071.67744470356 0.8662939773158137 0.9227834426547056 0.996777171649979 1.109589328596295 0.7689413342661807 1.038056053418638 0.8664122927476671 0.8503343118786424 1.0108020858673779 1.0 17.610157425278143 -5.754090305673284 24.9999820746348 0.9179220432848967 0.9718493910142603 0.06302189659544566 0.096101724517071 524.1489555931977 1783034.6359470189 0.02830539984270026 0.035796263222632 1.7616097053736922e-06 5.754090305673284 0.053927347729363584 NPQMPQYSSPQPGSALS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 NPQMPQYSSPQPGSALSPR 19 0 O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 NPQMPQYSSPQPGS(0.001)ALS(0.999)PR;NPQMPQYSSPQPGSALS(1)PR 291.99 9.1321e-44 1268570000.0 401610.0 421180.0 282320.0 262020.0 297220.0 377170.0 331140.0 327370.0 392190.0 364530.0 True False 379331.89271031367 400945.880595931 300518.7989279714 286922.3020208144 320609.5230495303 374815.9421258925 364614.8628149631 326234.4298787322 320978.1823053492 361300.54780004855 1.0499067743463375 1.109729512001247 0.8317695634778969 0.794137467457158 0.8873762439656262 1.0374076220147987 1.009173290865722 0.9029447418919423 0.888396611241745 1.0 18.462839916607706 -4.749046153573471 24.999896459885328 0.9173091397716441 1.0798182154838918 0.42548016171208536 0.07477726315026186 233.7095332458392 471435.7157162107 0.021237794909511623 0.05532983536055551 1.782189359611189e-05 4.749046153573471 0.1625090757122477 NPS(ph)PDHSYK ddPTM_KYSE-520_SHP099_60min_R1 1 NPSPDHSYK 9 0 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 NPS(0.943)PDHS(0.057)YK 90.697 0.0061598 0.0 239340.0 193880.0 180820.0 199770.0 208670.0 220180.0 211390.0 222700.0 236210.0 203630.0 True False 226063.33308753857 184565.7137801868 192475.94652222944 218756.0807369594 225091.14183011092 218805.7749483758 232759.3641675881 221927.50567857048 193320.21836953133 201825.9966217427 1.120090260281092 0.9144793875394324 0.9536727168153818 1.0838845559967514 1.1152732829159326 1.0841307790415928 1.1532675079703432 1.0995982152611465 0.9578558838079086 1.0 17.622752490217536 -5.273977478288811 24.065524723530665 1.0805958600456051 0.9879206495212421 0.17005752698802945 0.07243219952252403 622.4073177411466 1194642.8275658162 0.020214214672650825 0.03023662468960161 5.321358541356567e-06 5.273977478288811 -0.092675210524363 NPS(ph)PDHSYKR ddPTM_KYSE-520_SHP099_60min_R1 1 NPSPDHSYKR 10 1 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 NPS(0.905)PDHS(0.095)YKR 62.376999999999995 0.022034 615910000.0 913690.0 843290.0 947880.0 789070.0 965830.0 794610.0 773740.0 795630.0 1041400.0 871140.0 True False 863005.7943041407 802777.0825959038 1008981.8614616222 864062.9755574542 1041835.3261790188 789650.5442443871 851957.1901746993 792870.1452314374 852308.0115576391 863422.3773366644 0.9995175211536576 0.9297617292155101 1.1685843313141298 1.000741929138744 1.206634613053106 0.9145588126638137 0.9867212299994692 0.9182876956202429 0.9871275449064583 1.0 19.719706958079684 NPS(ph)PPPPGR ddPTM_KYSE-520_SHP099_60min_R1 1 NPSPPPPGR 9 0 E9PL53;E9PMD2;J3KND1;E9PRZ1;Q96ER3 E9PL53 SAAL1 Protein SAAL1 1 NPS(1)PPPPGR 66.56 0.027683 1234700000.0 1564900.0 1459900.0 1228000.0 1063900.0 1364300.0 1708400.0 1363900.0 1329100.0 1515600.0 1763600.0 True False 1478091.87744919 1389764.2126454243 1307158.844869471 1165012.7361268003 1471662.6481948548 1697737.241901198 1501776.3223812554 1324489.6623142723 1240405.2451668512 1747975.876060039 0.8456019889592692 0.7950705908928053 0.7478128633078304 0.6664924568368498 0.8419238894257524 0.9712589659577684 0.8591516295787098 0.7577276554294843 0.7096237780825335 1.0 20.737253843562737 -5.96308741085686 24.98955160282225 0.851297201507468 0.7635145161587582 0.1993899726248738 0.09098660288729826 320.58312626824045 217031.10158893708 0.02983472956387714 0.03382934747582257 1.0887109454091335e-06 5.96308741085686 -0.08778268534870981 NPS(ph)PTTRPVSR ddPTM_KYSE-520_SHP099_60min_R1 4 NPSPTTRPVSR 11 1 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3;A0A0U1RQR2 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 NPS(0.461)PT(0.201)T(0.201)RPVS(0.137)R;NPS(0.772)PT(0.055)T(0.055)RPVS(0.118)R;NPS(0.594)PT(0.086)T(0.086)RPVS(0.234)R;NPS(0.899)PT(0.006)T(0.006)RPVS(0.089)R 77.185 0.022599 15346030000.0 9152700.0 8291430.0 8513100.0 7629000.0 8067600.0 8085680.0 8227760.0 7588000.0 9677100.0 8347400.0 True False 8644981.485544903 7893097.25710984 9061868.047441607 8354057.866257516 8702474.221635118 8035214.271889302 9059502.275999404 7561678.999052517 7919982.579839093 8273448.530178938 1.0449066618364433 0.9540274805987254 1.0952951498261896 1.0097431362248208 1.051855727377916 0.9712049627890192 1.0950092023843734 0.9139694253816761 0.957277071459318 1.0 22.980057366721848 -7.274939222804377 24.961682740232863 0.9517174381674824 1.0287789797295854 0.3377022661969161 0.047597722644716206 854.0889040087586 1579231.1622112817 0.024083698845332645 0.011668268325391579 5.3095874387529406e-08 7.274939222804377 0.07706154156210299 NPSDSAVHS(ph)PFTK ddPTM_KYSE-520_SHP099_60min_R1 5 NPSDSAVHSPFTK 13 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 NPSDSAVHS(1)PFTK;NPSDSAVHS(1)PFTK;NPSDSAVHS(1)PFTK;NPSDSAVHS(1)PFTK;NPSDSAVHS(1)PFTK 163.41 6.456999999999999e-07 3782870000.0 3247050.0 3995670.0 3604340.0 7559270.0 3408420.0 3394050.0 3850750.0 3385370.0 4370770.0 3717640.0 True False 3066929.6636663033 3803712.015577057 3836681.5235479004 8277700.748022599 3676643.2627430195 3372866.4749910804 4240021.389698376 3373626.941621299 3577148.346145364 3684704.6018801513 0.8323407152099457 1.0322976809691016 1.0412453474805556 2.246503218683754 0.9978122156297092 0.9153695721687016 1.1507086314422246 0.9155759568622889 0.9708100737085122 1.0 21.813117534238856 -5.935979369613829 24.99999999984841 0.9908742635658887 1.298436817725277 0.14020962676769733 0.35922931213078796 131.340065736012 51286.725277637175 0.11697619757372703 0.13264007434904965 1.1588324031178563e-06 5.935979369613829 0.30756255415938827 NPSDSAVHS(ph)PFTKR ddPTM_KYSE-520_SHP099_60min_R1 2 NPSDSAVHSPFTKR 14 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 NPSDSAVHS(1)PFTKR;NPSDSAVHS(0.938)PFT(0.062)KR 149.86 1.7197999999999998e-06 1137950000.0 308450.0 466740.0 405570.0 664370.0 302020.0 372690.0 322700.0 262634.0 542750.0 347720.0 True False 291339.6636201695 444317.10980897653 431713.6911349439 727511.5250498761 325787.25574126677 370363.90346766345 355321.66524850077 261722.9839532363 444200.2816140854 344639.4713220664 0.8453461888812843 1.2892229323139865 1.252653068085479 2.1109350077026288 0.9452987334605613 1.074641572675689 1.0309952713351624 0.7594109373173208 1.2888839456203183 1.0 18.394728416334953 NPSINQILLS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 2 NPSINQILLSPEK 13 0 Q14997-3;Q14997-2;Q14997 Q14997-3 PSME4 Proteasome activator complex subunit 4 1 NPSINQILLS(1)PEK;NPSINQILLS(1)PEK 203.2 6.3508e-09 656400000.0 676850.0 772530.0 460650.0 499050.0 523350.0 717020.0 566850.0 707430.0 741530.0 786350.0 True False 639303.7812329761 735416.4992088302 490344.2360660593 546479.561955147 564534.6675458306 712544.8122149359 624152.7299228781 704976.0904454034 606886.844450102 779383.5507710435 0.8202685065658795 0.9435874011984 0.6291436810296576 0.7011689705466778 0.7243348502638232 0.9142415329525698 0.800828718165022 0.9045303685816451 0.7786754594059745 1.0 19.571973957558505 -6.259118414308742 24.99256771561901 0.868761708230757 0.7627450148604945 0.26318537784387264 0.09614099878570719 341.2774964052661 3674942.764518945 0.033618182016292256 0.032110830742546226 5.506575341900045e-07 6.259118414308742 -0.10601669337026254 NPVDYMDLPFS(ph)SSPSR ddPTM_KYSE-520_SHP099_60min_R1 1 NPVDYMDLPFSSSPSR 16 0 Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-5;Q9BX66-12;A0A0U1RQI5;Q9BX66-3;Q9BX66-2;Q9BX66-11;Q9BX66;A0A3B3IT56 Q9BX66-4 SORBS1 Sorbin and SH3 domain-containing protein 1 1 NPVDYMDLPFS(0.3)S(0.3)S(0.3)PS(0.099)R 68.48100000000001 0.022746000000000002 47072000.0 111300.0 103650.0 99250.0 87403.0 93166.0 107130.0 86157.0 92718.0 106990.0 88200.0 True False 105125.96712895067 98670.49841817819 105647.81380561483 95709.75484132979 100497.63415797248 106461.36193214411 94866.5903712894 92396.38289854377 87563.31299841733 87418.61661856173 1.202558118571612 1.1287126499463196 1.2085276328106807 1.0948440794818937 1.1496136411821651 1.2178339814809995 1.0851989432093831 1.0569417187382613 1.0016552124187341 1.0 16.41565292750451 -7.195476964310376 1.9370495203786744 1.0080140185930022 1.1626709545663445 0.7449545329366054 0.03882758141067803 0.17928492194135973 1.266693198862139 0.026315619454094497 0.01131271946305406 6.375628975168992e-08 7.195476964310376 0.1546569359733423 NPVDYMDLPFSS(ph)SPSR ddPTM_KYSE-520_SHP099_60min_R1 1 NPVDYMDLPFSSSPSR 16 0 Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-5;Q9BX66-12;A0A0U1RQI5;Q9BX66-3;Q9BX66-2;Q9BX66-11;Q9BX66;A0A3B3IT56 Q9BX66-4 SORBS1 Sorbin and SH3 domain-containing protein 1 1 NPVDYMDLPFS(0.311)S(0.333)S(0.333)PS(0.023)R 74.428 0.029147000000000003 0.0 48466.0 54853.0 43966.0 37637.0 39657.0 45580.0 41076.0 40359.0 47245.0 38532.0 True False 45777.49436542432 52217.77954396842 46800.118708087204 41214.00916402333 42777.78028253557 45295.518312957494 45228.36294312809 40219.0040488614 38666.49894953014 38190.63645744239 1.198657540479492 1.3672927289954209 1.2254343747383931 1.0791652872805622 1.1201117407457937 1.1860372728648396 1.18427884786702 1.0531116467168415 1.0124601875283756 1.0 15.22093134261919 -4.840855799612695 0.20537713930505067 0.9649315199878968 1.491063046785333 0.5907638373629958 0.06828007656791465 8.09933990335359 0.4010652536310631 0.1699430589842852 1.1098655947615237 1.4425942618691474e-05 4.840855799612695 0.5261315267974361 NPVSLPSLPNPTKPNNVPSVPS(ph)PSIQR ddPTM_KYSE-520_SHP099_60min_R1 1 NPVSLPSLPNPTKPNNVPSVPSPSIQR 27 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 NPVSLPSLPNPTKPNNVPS(0.001)VPS(0.963)PS(0.036)IQR 155.92 2.0813000000000002e-07 262400000.0 58037.0 92085.0 58578.0 44856.0 61933.0 82970.0 61173.0 89657.0 111440.0 72760.0 True False 54817.57191610878 87661.09837759715 62354.03160811389 49119.100753551844 66806.77474943343 82452.15345384125 67356.96383094697 89346.00079310105 91205.30517378866 72115.40300642335 0.7601368033847936 1.2155669208392157 0.8646423511293417 0.6811180234155633 0.926387040276027 1.14333623631691 0.9340163269273758 1.2389308950425328 1.2647132425463248 1.0 16.13801981471111 -6.615598140488637 1.3831684134028206 1.1614947480837645 0.8991133800291494 0.31049060630236847 0.1621676612762778 0.544887386951233 2.1250064698954323 0.0938620036802155 0.06271698400553448 2.4232702997459346e-07 6.615598140488637 -0.2623813680546151 NPWGEVEWTGR ddPTM_KYSE-520_SHP099_60min_R1 2 NPWGEVEWTGR 11 0 P17655-2;P17655 P17655-2 CAPN2 Calpain-2 catalytic subunit 0 ; 138.76 0.00076427 479840000.0 236850.0 223000.0 173132.0 146712.0 236440.0 230852.0 235910.0 213021.0 215579.0 214550.0 False True 223711.45835123077 212286.74527017586 184292.3657409946 160655.46436942875 255046.48284042446 229411.16703779873 259758.08505972679 212282.07987047525 176435.28790434476 212649.25391737395 1.05202089464257 0.9982952743048938 0.8666494819332986 0.7554950765632703 1.1993763351717386 1.0788242272739772 1.2215330186893447 0.9982733348923888 0.8297009495876232 1.0 17.698116267695372 -4.2608863105021815 17.49591080734058 0.9988935904376397 1.0520209054554461 0.013752411863299563 0.14195422208035866 5.913943457769925 182462.454284561 0.038031088782074986 0.2167621622358235 5.4842051151174755e-05 4.2608863105021815 0.05312731501780643 NQAAIQGRPPYAAS(ph)AEEVAK ddPTM_KYSE-520_SHP099_60min_R1 2 NQAAIQGRPPYAASAEEVAK 20 1 A0A0C4DG79;Q9NZB2-4;Q9NZB2;Q9NZB2-6;A0A494C0Y9 A0A0C4DG79 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 NQAAIQGRPPYAAS(1)AEEVAK;NQAAIQGRPPYAAS(1)AEEVAK 116.38 5.0659e-05 1477510000.0 1895490.0 1752210.0 1575100.0 1503550.0 1556150.0 1409110.0 1444280.0 1614900.0 1852200.0 1538930.0 True False 1790343.3911343652 1668031.2014791702 1676633.4662491065 1646446.939941211 1678610.1517176733 1400315.2218071837 1590281.9172144549 1609298.2888204937 1515887.1701623409 1525296.2774694234 1.1737676263818555 1.09357849102376 1.099218224691902 1.0794276261348945 1.100514160109673 0.9180611285109852 1.0426052568966124 1.05507258661277 0.9938312920276099 1.0 20.54065807201271 -6.100239333472117 11.535290443343113 1.0079036059652253 1.1069267536702327 0.6246591260679386 0.04150063247764597 0.4767887370741326 52.75987401589564 0.013811938096127827 0.01381496471236906 7.938906123995886e-07 6.100239333472117 0.09902314770500742 NQAS(ph)DS(ph)ENEELPKPR ddPTM_KYSE-520_SHP099_60min_R1 5 NQASDSENEELPKPR 15 1 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 2 NQAS(1)DS(1)ENEELPKPR;NQAS(1)DS(1)ENEELPKPR;NQAS(1)DS(1)ENEELPKPR;NQAS(1)DS(1)ENEELPKPR;NQAS(1)DS(1)ENEELPKPR 186.67 1.8341999999999997e-10 2206200000.0 4904350.0 4230960.0 3643290.0 4293940.0 4482240.0 4254670.0 4333970.0 4727100.0 4693260.0 4164640.0 True False 4632295.928920655 4027698.3307995633 3878142.302870106 4702034.766579861 4834966.787542986 4228115.026340295 4772089.983071101 4710702.793413435 3841082.2914567012 4127744.52964089 1.1222341633927766 0.9757625022278134 0.9395306020083323 1.1391293072560702 1.1713338247615879 1.0243160631620136 1.156101098021749 1.1412292499175722 0.9305523304250788 1.0 21.976922252966784 -3.9195029358970728 19.544722771430408 1.0618676767763149 3.3824273413569848 0.04423816465243402 0.08831325403301515 1270.2054348537251 312506.0801859431 0.022013539306054302 1717.0704553002927 0.00012036412529648831 3.9195029358970728 2.32055966458067 NQESLGS(ph)PHICDLGK ddPTM_KYSE-520_SHP099_60min_R1 1 NQESLGSPHICDLGK 15 0 A0A087WUA7;A4D1E1 A0A087WUA7 ZNF804B Zinc finger protein 804B 1 NQES(0.015)LGS(0.985)PHICDLGK 58.676 0.042694 390440000.0 302950.0 319370.0 1409100.0 150860.0 473950.0 313850.0 362500.0 237410.0 981730.0 473400.0 True False 286144.7595841474 304026.9858158565 1499932.8406397149 165197.68904228695 511247.16859338206 311891.14573325345 399145.03765906947 236586.48012191034 803472.5793993499 469206.0442996263 0.6098488351983391 0.6479605058576579 3.1967466294655944 0.3520792007035501 1.089600559934196 0.6647210740833627 0.8506817900329153 0.5042272643249041 1.7124088428968898 1.0 18.8398620726816 NQGET(ph)PTTEVPAPFFLPASLSANNT(ph)PTRR ddPTM_KYSE-520_SHP099_60min_R1 1 NQGETPTTEVPAPFFLPASLSANNTPTRR 29 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 2 NQGET(1)PTTEVPAPFFLPAS(0.285)LS(0.183)ANNT(0.464)PT(0.068)RR 123.55 0.00013289 47398000.0 49979.0 49088.0 46793.0 41012.0 46828.0 43121.0 38334.0 44567.0 57689.0 50493.0 True False 47206.5652393336 46729.73879740983 49809.35165144719 44909.76814929256 50513.09718512686 42851.8658440772 42209.17482378693 44412.40747901598 47214.13182134502 50045.671302959556 0.9432696976639804 0.9337418717899458 0.9952779202404587 0.8973756766579076 1.009339986256507 0.8562551910766968 0.8434131009706489 0.8874375410044616 0.943420891200093 1.0 15.610957668194615 -6.271813209540609 24.98724521175568 0.8951519280744855 0.9535228306583439 0.1754203940147444 0.05106892102225974 1050.0183799078027 2529150.465766885 0.017349734946675747 0.015470030772962504 5.347943254744205e-07 6.271813209540609 0.05837090258385835 NQGETPTTEVPAPFFLPAS(ph)LSANNT(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 1 NQGETPTTEVPAPFFLPASLSANNTPTR 28 0 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 2 NQGETPTTEVPAPFFLPAS(0.588)LS(0.423)ANNT(0.68)PT(0.309)R 61.96 0.044237 20517000.0 19764.0 22561.0 18169.0 15176.0 16564.0 17712.0 16011.0 20270.0 21289.0 16435.0 True False 18667.651521442778 21477.135695248588 19340.20281142784 16618.32247716923 17867.492563732005 17601.45283806719 17629.54813230167 20199.68810105357 17423.454252017083 16289.398686236516 1.1460000384922575 1.3184732051156298 1.1872877068058414 1.0201925066276776 1.096878583911687 1.0805465061727095 1.0822712656175266 1.2400511823755038 1.0696192405640346 1.0 13.991645728139936 -5.027872715457325 9.654257111235657 1.0951566861452595 1.2374330180561603 0.4215006836368148 0.07185523924096485 0.3992769159918558 136.13395347518832 0.019037397516260563 0.034001039228064446 9.378368311427137e-06 5.027872715457325 0.14227633191090083 NQGETPTTEVPAPFFLPAS(ph)LSANNTPTRR ddPTM_KYSE-520_SHP099_60min_R1 2 NQGETPTTEVPAPFFLPASLSANNTPTRR 29 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 NQGETPTTEVPAPFFLPAS(0.317)LS(0.317)ANNT(0.317)PT(0.049)RR;NQGETPTTEVPAPFFLPAS(0.369)LS(0.313)ANNT(0.243)PT(0.075)RR 65.624 0.019454 279837000.0 96129.0 113928.0 84850.0 77402.0 89591.0 101073.0 75870.0 87014.0 119550.0 108010.0 True False 90796.5327415894 108454.7278705857 90319.56676480023 84758.26280824006 96641.30199693984 100442.16591587431 83539.68001984432 86712.16874322033 97842.73361025138 107053.11543050845 0.8481447025287955 1.0130926823982724 0.8436892882713862 0.7917402727364746 0.9027416120334467 0.9382460801066036 0.7803572991210384 0.8099920155944265 0.9139643738230503 1.0 16.707967255687965 -4.819936645217638 24.99986942220502 0.8630452978475893 0.930624582282979 0.07519116952359206 0.07569366968855916 144.15324162457037 61605.57739827881 0.019261339987504966 0.04009571975232758 1.5137820625200306e-05 4.819936645217638 0.06757928443538963 NQGETPTTEVPAPFFLPASLS(ph)ANNT(ph)PTRR ddPTM_KYSE-520_SHP099_60min_R1 1 NQGETPTTEVPAPFFLPASLSANNTPTRR 29 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 2 NQGETPTTEVPAPFFLPAS(0.347)LS(0.7)ANNT(0.681)PT(0.273)RR 110.99 0.00046462 141890000.0 126370.0 126240.0 113910.0 104710.0 124710.0 111600.0 92673.0 97792.0 131630.0 121310.0 True False 119360.00418765051 120175.24090989692 121252.82086244418 114661.6069177906 134523.96749716342 110903.46300408192 102041.29124132117 97452.78237682444 107729.31012227018 120235.28777775196 0.9927202437297828 0.999500588646105 1.0084628489979837 0.9536435520471828 1.1188393190011179 0.9223869718603794 0.848680059966577 0.8105173129951693 0.8959874601988863 1.0 16.8755008482774 -6.510153252218489 21.258654237120684 0.8747955006428875 1.011116700982832 0.4944568227531285 0.06027163460251511 63.35155669679585 105834.39055461006 0.02105650285745995 0.017658567881819003 3.089205132958283e-07 6.510153252218489 0.13632120033994444 NQGGYDRYS(ph)GGNYR ddPTM_KYSE-520_SHP099_60min_R1 5 NQGGYDRYSGGNYR 14 1 P98179 P98179 RBM3 RNA-binding protein 3 1 NQGGYDRYS(1)GGNYR;NQGGYDRYS(1)GGNYR;NQGGYDRYS(1)GGNYR;NQGGYDRYS(1)GGNYR;NQGGYDRYS(1)GGNYR 228.93 2.4686e-14 4617830000.0 3390690.0 3334160.0 3065890.0 3091590.0 3043230.0 3307480.0 3614170.0 3244610.0 3733900.0 3307180.0 True False 3202601.666527062 3173981.9489238104 3263522.1749974424 3385413.7840795717 3282714.8873898867 3286836.7904725852 3979525.574500079 3233355.2052076636 3055917.8839591607 3277880.958147107 0.9770341593910115 0.9683029949684238 0.9956194921862626 1.0328055921814958 1.0014747116519789 1.0027322018217955 1.214054331231599 0.9864162995825777 0.9322845835397829 1.0 21.644332030775175 -5.093360200502743 1.5350012497104761 1.0316216541712537 0.9692034417281138 0.07571915267147789 0.06932741689068296 1.1134580203618885 4.975637384982174 0.023084042733023866 0.06468951663258704 8.065657932922725e-06 5.093360200502743 -0.06241821244313994 NQGGYDRYS(ph)GGNYRDNYDN ddPTM_KYSE-520_SHP099_60min_R1 1 NQGGYDRYSGGNYRDNYDN 19 2 P98179 P98179 RBM3 RNA-binding protein 3 1 NQGGYDRYS(1)GGNYRDNYDN 108.64 7.3602e-05 466930000.0 177450.0 191850.0 221290.0 160470.0 145810.0 142860.0 161620.0 143710.0 265680.0 178270.0 True False 167606.49476219487 182633.23802727895 235554.7074765187 175721.02055293505 157284.4174545858 141968.3577487738 177958.12685919652 143211.50355216628 217439.20924777602 176690.6664919611 0.9485871443572853 1.033632628442138 1.3331474273839796 0.9945121835902397 0.8901682277696416 0.8034853258942963 1.0071733294825342 0.810521044464349 1.2306207994165264 1.0 17.43086630741404 -5.509145030149213 24.845994777514736 0.9423529969268005 1.1089494892196294 0.1678040982166077 0.14548668287960345 932.0269062259018 1686152.7785864198 0.041140292747955096 0.058206380780080426 3.0963851065129624e-06 5.509145030149213 0.1665964922928289 NQGGYGGSSSS(ph)SSYGSGR ddPTM_KYSE-520_SHP099_60min_R1 2 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-3;P09651-2;P09651;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 NQGGYGGS(0.007)S(0.208)S(0.108)S(0.456)S(0.22)SYGSGR;NQGGYGGS(0.001)S(0.025)S(0.012)S(0.757)S(0.205)S(0.002)YGSGR 218.14 3.6392e-15 574630000.0 1090780.0 1007670.0 988250.0 993620.0 841710.0 902670.0 949080.0 1109600.0 1258900.0 1069560.0 True False 1030272.2589839787 959260.0206564931 1051954.1762559076 1088053.3460572534 907947.7883252142 897036.1017015646 1045022.2685281923 1105751.0565825873 1030315.4942864534 1060084.5305050896 0.9718774581995773 0.9048901224881025 0.9923304660947103 1.0263835710712974 0.8564862161441144 0.8461929930004368 0.9857914519611746 1.0430781930717727 0.9719182429683675 1.0 20.015747878337354 -6.984630040911448 24.93135575841326 1.00738592027594 0.9336065474099108 0.26644837974462143 0.05524535428119393 326.00381677252005 528804.1604310172 0.02499161829501429 0.01684292111297242 1.0360243409401175e-07 6.984630040911448 -0.07377937286602931 NQGGYGGSSSSS(ph)SYGSGR ddPTM_KYSE-520_SHP099_60min_R1 3 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-3;P09651-2;P09651;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 NQGGYGGSSS(0.002)S(0.192)S(0.738)S(0.068)YGSGR;NQGGYGGSSSS(0.028)S(0.964)S(0.008)YGSGR;NQGGYGGSSSS(0.084)S(0.914)S(0.002)YGSGR 345.14 5.357599999999999e-54 0.0 786630.0 671910.0 819580.0 644370.0 681910.0 633960.0 649630.0 773810.0 873900.0 829340.0 True False 742994.0657919723 639630.4350425284 872411.4381743653 705610.7310630952 735572.4374628408 630003.2204844778 715300.9401778246 771125.8337186113 715221.7892262544 821992.6928167575 0.9038937599869931 0.7781461327237345 1.061337218442704 0.8584148462988749 0.8948649347991444 0.7664340887576736 0.8702035266599175 0.9381176261751931 0.8701072351085912 1.0 19.648766043424203 -8.913853717276398 0.9765602848729763 1.0009628222654232 0.880132798093004 0.16827674981870977 0.0781234885027201 11.423395076374668 10.570019931246014 0.11321639979221251 0.024163212320633454 1.219400258420931e-09 8.913853717276398 -0.12083002417241917 NQGGYGGSSSSSS(ph)YGSGR ddPTM_KYSE-520_SHP099_60min_R1 4 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-3;P09651-2;P09651;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 NQGGYGGSSSSS(0.016)S(0.984)YGSGR;NQGGYGGSSSSS(0.014)S(0.986)YGSGR;NQGGYGGSSSSSS(1)YGSGR;NQGGYGGSSSSSS(1)YGSGR 318.69 9.017399999999999e-48 3631650000.0 3458810.0 3240770.0 3050510.0 3141270.0 2765430.0 2929560.0 3036970.0 3350550.0 3975920.0 2997230.0 True False 3266942.9143332047 3085078.544705061 3247150.7555885697 3439815.3563427352 2983053.607855675 2911275.5293748975 3343976.56557093 3338927.724074248 3253993.152786876 2970676.8740096577 1.099730146659695 1.0385103044010944 1.093067638556644 1.1579230937021636 1.0041663009377764 0.9800041043997547 1.125661493118709 1.1239619338226934 1.0953709510636926 1.0 21.50236025843687 -10.060090950806522 9.76054243643456 1.000013973763083 1.0787789050637262 0.16791875282301494 0.05326046047563781 8.120520614758778e-11 0.0 0.054823362067381684 0.013296618385605608 8.707812101419837e-11 10.060090950806522 0.0787649313006431 NQGGYGGSSSSSSYGS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 1 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-3;P09651-2;P09651;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 NQGGYGGSSSSSSYGS(1)GR 195.48 1.2133e-12 361940000.0 252010.0 235060.0 235920.0 208210.0 222030.0 219180.0 189720.0 239440.0 300940.0 206560.0 True False 238030.50293051993 223767.3647677466 251127.78068534628 227998.21579938103 239502.49782210885 217812.0163193069 208898.7490887686 238609.4385257161 246296.88208004273 204730.03910124817 1.1626554851230366 1.0929874567995546 1.226628890356204 1.1136529685642549 1.1698454163029008 1.0638986700509987 1.0203619850111925 1.1654832850772479 1.2030324575781373 1.0 17.643363272366816 -6.251876405105582 24.37640074252379 1.0965109032319154 1.1516988880931676 0.18181686132759411 0.0657563504034679 1024.091686505716 2610450.3562537106 0.022320089846500604 0.022029021602729328 5.599169243274668e-07 6.251876405105582 0.055187984861252204 NQGGYGGSSSSSSYGSGR ddPTM_KYSE-520_SHP099_60min_R1 4 NQGGYGGSSSSSSYGSGR 18 0 F8W6I7;P09651-3;P09651-2;P09651;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ;;; 452.75 5.416899999999999e-119 1164220000.0 58212.0 75711.0 40107.0 58177.0 63721.0 71294.0 59524.0 84442.0 69803.0 63399.0 False True 54982.86431725496 72073.72991547213 42692.361393468906 63706.12458844714 68735.48017710492 70849.02770083348 65541.26681825765 84149.09041091098 57128.53479043399 62837.33418367561 0.87500313359154 1.1469889811811276 0.6794107666738013 1.0138260226353975 1.0938637208285895 1.1274989402596143 1.0430306706945645 1.3391575486786311 0.9091495610467081 1.0 15.939334356464649 -5.517883239142772 16.482252235673602 1.0979794758496557 0.9120366177793848 0.23556165698039255 0.14765505966861223 3.570750410529649 11778.333355044215 0.0411659215395161 0.055421162148439125 3.034706960984977e-06 5.517883239142772 -0.1859428580702709 NQIGDKEK ddPTM_KYSE-520_SHP099_60min_R1 1 NQIGDKEK 8 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 66.435 0.02988 867330000.0 1226300.0 1467900.0 663020.0 733800.0 1844600.0 2002400.0 1107500.0 1438200.0 1650100.0 2621100.0 False True 1158274.694431557 1397379.8806371796 705759.330069509 803540.1313749858 1989759.525661677 1989902.2788474348 1219456.9081583982 1433211.2198784037 1350483.4356359334 2597879.0931849396 0.445853965055602 0.5378925771807279 0.2716675044350368 0.3093062080844818 0.7659169092516457 0.765971859147556 0.4694047969196951 0.5516851125359032 0.5198407574773898 1.0 21.308902857799918 -5.757117493490794 24.999792334408482 0.6502760080029574 0.3931229025862941 0.4325608634200605 0.15938278418381888 121.92318773252178 705255.4239421557 0.04866509370742655 0.06061515656377975 1.749373351301514e-06 5.757117493490794 -0.25715310541666325 NQKDPGVLDR ddPTM_KYSE-520_SHP099_60min_R1 5 NQKDPGVLDR 10 1 P31949 P31949 S100A11 Protein S100-A11;Protein S100-A11, N-terminally processed 0 ;;;; 97.734 0.0027329 5321730000.0 11973000.0 13691300.0 9444700.0 5883460.0 10203200.0 10053100.0 5457900.0 6729530.0 11625000.0 7839200.0 False True 11308833.822416242 13033549.396939738 10053520.474054301 6442622.269473251 11006133.791733298 9990354.873891901 6009637.795970857 6706186.831114106 9514193.042402115 7769750.786805311 1.4554950516071952 1.677473287698426 1.293930880141911 0.8291929105904134 1.4165362691457304 1.2858011985220488 0.7734659657522736 0.8631147915970017 1.224517143916538 1.0 22.88943689454582 -4.982008191717164 5.212196653070477 1.062121387024765 1.5565100133474112 0.5053817825458344 0.20220027615694353 0.14609367685734004 11.617263551876006 0.05672508353879087 0.11664165251667329 1.0422977692562141e-05 4.982008191717164 0.49438862632264624 NQKPEVR ddPTM_KYSE-520_SHP099_60min_R1 2 NQKPEVR 7 1 C9JXB8;C9JNW5;P83731 C9JXB8 RPL24 60S ribosomal protein L24 0 ; 104.37 0.0046159999999999994 1289390000.0 2472900.0 2031680.0 1291850.0 1295100.0 2447800.0 2288200.0 1580620.0 1948600.0 1803810.0 2202690.0 False True 2335723.307396064 1934075.0431861486 1375124.718033083 1418185.9146139873 2640427.933923158 2273918.4950353066 1740404.494964628 1941840.7614066585 1476283.574349707 2183175.8802668885 1.0698740896269552 0.8858997851101726 0.6298735390320348 0.6495976469108926 1.2094435257320502 1.0415645004090668 0.7971893197866712 0.889456859137374 0.6762091811719881 1.0 21.057996930238144 -4.278185824893942 5.242201239638373 0.8603097932536196 1.0766997452813332 0.10968896852452381 0.17627416756942363 0.35394091313200626 32.08289887503923 0.04692793290726602 0.2635704685756149 5.270043198144292e-05 4.278185824893942 0.2163899520277136 NQKPSQVNGAPGS(ph)PTEPAGQK ddPTM_KYSE-520_SHP099_60min_R1 12 NQKPSQVNGAPGSPTEPAGQK 21 1 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 NQKPSQVNGAPGS(0.999)PT(0.001)EPAGQK;NQKPSQVNGAPGS(0.987)PT(0.013)EPAGQK;NQKPSQVNGAPGS(0.998)PT(0.002)EPAGQK;NQKPSQVNGAPGS(0.997)PT(0.003)EPAGQK;NQKPSQVNGAPGS(0.817)PT(0.183)EPAGQK;NQKPSQVNGAPGS(0.9)PT(0.1)EPAGQK;NQKPSQVNGAPGS(0.976)PT(0.024)EPAGQK;NQKPSQVNGAPGS(0.951)PT(0.049)EPAGQK;NQKPSQVNGAPGS(0.886)PT(0.114)EPAGQK;NQKPSQVNGAPGS(0.898)PT(0.102)EPAGQK;NQKPSQVNGAPGS(0.976)PT(0.024)EPAGQK;NQKPSQVNGAPGS(0.951)PT(0.049)EPAGQK 254.27 1.7933e-27 234801400000.0 52926600.0 48782700.0 44846000.0 37537550.0 37123770.0 48502800.0 44493550.0 47131600.0 54564500.0 48674300.0 True False 49990655.99143871 46439105.86767452 47736844.91613703 41105107.46592407 40045199.49364264 48200076.03399985 48991392.24920186 46968111.4801981 44656962.25910966 48243083.570032395 1.0362243101411508 0.9626065008937682 0.9895065029754891 0.8520414621974477 0.8300713082635102 0.9991085243137473 1.0155112116347864 0.9735719196310602 0.9256655867422546 1.0 25.52381878763979 NQNNYHCHCR ddPTM_KYSE-520_SHP099_60min_R1 5 NQNNYHCHCR 10 0 Q99519 Q99519 NEU1 Sialidase-1 0 ;;;; 154.56 0.00013142 1071963000.0 53104.8 39993.8 27085.199999999997 30158.5 53439.4 41867.6 35687.9 30792.8 42295.6 25022.899999999998 False True 50158.97088220574 38072.437816082325 28831.15532985225 33024.754772516324 57644.7767514066 41606.28877840234 39295.58121233958 30685.98696389354 34615.78522530952 24801.216573521615 2.022439936908445 1.5351036390984703 1.1624895595094755 1.331578016530623 2.3242721412686493 1.6775906397600766 1.5844215180271641 1.2372774889057117 1.3957293233053 1.0 14.598123270384917 -7.5870604988691 1.264762173959718 1.078475676324602 1.6569787200849038 0.30175969712784134 0.3189682003390993 0.6298390960748482 1.8563299996804388 0.3163165692973555 0.10540933954372401 2.5878523923856655e-08 7.5870604988691 0.5785030437603018 NQNYLVPS(ph)PVLR ddPTM_KYSE-520_SHP099_60min_R1 4 NQNYLVPSPVLR 12 0 C9J3R1;C9IZP0;J3KR59;J3KR68;Q9UID6 C9J3R1 ZNF639 Zinc finger protein 639 1 NQNYLVPS(1)PVLR;NQNYLVPS(1)PVLR;NQNYLVPS(1)PVLR;NQNYLVPS(1)PVLR 227.06 3.1314e-11 3719440000.0 4213570.0 4622460.0 3628720.0 3137210.0 3344010.0 4475070.0 3566430.0 4360530.0 5191000.0 4334060.0 True False 3979834.872556445 4400390.083146086 3862633.0973572796 3435369.495163417 3607164.562185792 4447139.428187073 3926959.5494025755 4345404.339185354 4248445.254461025 4295663.600247654 0.9264773136162243 1.0243795819794628 0.8991935721257573 0.7997296378062194 0.8397223101869129 1.0352624977269371 0.9141683136398712 1.0115792910168366 0.9890079042074181 1.0 22.03444958749454 -6.265700278935691 24.998501192588737 0.9859876004264222 0.8995450023554923 0.3553784058624859 0.06188492696410014 511.44538559073794 3000614.985016617 0.023829638867735568 0.021767320265104556 5.423750723430343e-07 6.265700278935691 -0.08644259807092991 NQQFHK ddPTM_KYSE-520_SHP099_60min_R1 1 NQQFHK 6 0 Q15233-2;Q15233;H7C367 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 0 74.832 0.056883 319160000.0 345370.0 268410.0 242900.0 261410.0 406130.0 451560.0 356760.0 277770.0 353090.0 553480.0 False True 326211.6376219737 255515.18070837643 258557.72265374157 286254.32780421735 438090.12043639715 448741.6465423234 392824.7824420673 276806.4807020055 288977.75667456 548576.5978009236 0.5946510276407283 0.4657784924341631 0.47132474059269147 0.5218128679781888 0.798594256832258 0.8180109183315364 0.7160800953171939 0.5045903923201214 0.5267774050752142 1.0 19.065333552771946 -5.69044127464271 8.041801629650765 0.706322967410512 0.5056306485256604 0.3590175515562313 0.13824944698325078 0.32609729505755763 32.453936886187854 0.042644248060859376 0.05500310037596645 2.0396644446583546e-06 5.69044127464271 -0.20069231888485162 NQQGFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 NQQGFSPK 8 0 D6RCT7;C9JKA9;Q9NS87-4;Q9NS87-2;Q9NS87 D6RCT7 KIF15 Kinesin-like protein;Kinesin-like protein KIF15 1 NQQGFS(1)PK;NQQGFS(1)PK;NQQGFS(1)PK;NQQGFS(1)PK;NQQGFS(1)PK;NQQGFS(1)PK;NQQGFS(1)PK;NQQGFS(1)PK 155.53 0.00030495 7078440000.0 13465700.0 11403800.0 10581400.0 11231300.0 11974300.0 11568500.0 12491000.0 12933900.0 13090500.0 11835600.0 True False 12718730.777792554 10855944.330547217 11263493.974838609 12298719.37518653 12916609.285552774 11496296.700382818 13753712.180412225 12889035.319694957 10713595.184650749 11730745.791957473 1.0842218392041567 0.9254266116643654 0.960168617971484 1.048417516950922 1.1010902047172757 0.9800141358671848 1.1724499383356926 1.0987396324393628 0.9132919061289286 1.0 23.483791401035386 -5.30961376622356 8.288988794957094 1.0540450109646766 0.9835414726293324 0.08499709035542546 0.07780253375078668 0.6588475312531985 106.52851615167438 0.021749832607612825 0.032446451772388675 4.90214591116238e-06 5.30961376622356 -0.07050353833534417 NQRGS(ph)FEAPR ddPTM_KYSE-520_SHP099_60min_R1 1 NQRGSFEAPR 10 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 NQRGS(1)FEAPR 108.23 0.00058128 420930000.0 215370.0 207870.0 207120.0 165440.0 173860.0 174360.0 148210.0 153890.0 262490.0 158120.0 True False 203422.9967705493 197883.6131807689 220471.28660371708 181163.36785865034 187541.79287191763 173271.75456444212 163192.51319020847 153356.19150819612 214828.4328344198 156719.17981549836 1.2980095800018492 1.2626636600174428 1.4067919884679878 1.1559744510654633 1.1966741600658322 1.1056193298639687 1.0413053040625342 0.9785413099324448 1.3707858418307959 1.0 17.257822226879238 -5.646425116115457 1.6400098718593372 1.0988924793581887 1.3145711528428374 0.3975663156306787 0.11171835083102383 0.37469706444486983 2.0730008837096903 0.038246504750669146 0.05687142119063318 2.2572251674165036e-06 5.646425116115457 0.21567867348464875 NQS(ph)PTEAEKPASSS(ph)LPSSPPPQLLTR ddPTM_KYSE-520_SHP099_60min_R1 1 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 2 NQS(0.898)PT(0.102)EAEKPAS(0.005)S(0.166)S(0.499)LPS(0.271)S(0.058)PPPQLLT(0.001)R 82.26100000000001 0.006551 624610000.0 397120.0 401200.0 357170.0 374660.0 349630.0 361940.0 357830.0 351110.0 424520.0 367240.0 True False 375090.96196090686 381925.7497865226 380193.7496922055 410267.57375436375 377143.891877422 359680.99820517417 394002.9484842608 349892.0813596904 347437.8692783269 363986.5393083965 1.0305077838142302 1.049285367838635 1.0445269498553544 1.1271504010392936 1.0361479097387103 0.9881711529459215 1.0824657121466577 0.9612775297254489 0.9545349395021218 1.0 18.473525573124242 -7.272187814681257 24.840114351840533 0.9684296657773201 1.05077106209472 0.5093898247039875 0.03558600878927804 563.626072260399 1302556.8531577557 0.01979994473477993 0.00964726154104148 5.343332320563399e-08 7.272187814681257 0.08234139631739978 NQS(ph)PTEAEKPASSSLPS(ph)SPPPQLLTR ddPTM_KYSE-520_SHP099_60min_R1 4 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 2 NQS(0.998)PT(0.002)EAEKPASSSLPS(0.539)S(0.459)PPPQLLT(0.003)R;NQS(0.997)PT(0.003)EAEKPAS(0.007)S(0.006)S(0.014)LPS(0.526)S(0.447)PPPQLLTR;NQS(0.997)PT(0.003)EAEKPASSSLPS(0.795)S(0.205)PPPQLLTR;NQS(0.999)PT(0.001)EAEKPASSSLPS(0.626)S(0.374)PPPQLLTR 174.07 1.3182e-10 4464860000.0 3377550.0 3075100.0 2763290.0 2989570.0 3090910.0 3021860.0 3006590.0 3048800.0 3677690.0 3106480.0 True False 3190190.568521004 2927367.5801807977 2941416.094820322 3273697.833953006 3334147.0321277957 3002999.450837951 3310525.4586907094 3038224.4243952697 3009914.2030203757 3078959.00400487 1.0361263545150983 0.9507653646486056 0.9553281128440999 1.063248269851867 1.0828812685686937 0.9753294691263779 1.075209333539237 0.9867700155940317 0.9775752775874293 1.0 21.55401122751151 -5.249419977358683 24.87554852850899 1.025134625563481 0.9777424873884591 0.16429442025481544 0.04333553518819174 1201.2900128126473 2486202.622658932 0.011947521706783643 0.020483322057827418 5.630928627305169e-06 5.249419977358683 -0.04739213817502186 NQS(ph)PTEAEKPASSSLPSSPPPQLLTR ddPTM_KYSE-520_SHP099_60min_R1 5 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQS(0.495)PT(0.495)EAEKPAS(0.005)S(0.002)S(0.002)LPSSPPPQLLTR;NQS(0.866)PT(0.134)EAEKPASSSLPSSPPPQLLTR;NQS(0.852)PT(0.148)EAEKPASSSLPSSPPPQLLTR;NQS(0.996)PT(0.004)EAEKPASSSLPSSPPPQLLTR;NQS(0.886)PT(0.114)EAEKPASSSLPSSPPPQLLTR 209.47 1.4521e-21 18737250000.0 3779120.0 4275390.0 3034370.0 3075750.0 3025720.0 4164100.0 2941660.0 3839670.0 4094690.0 4020150.0 True False 3569484.6801110567 4069993.84690878 3229970.345363662 3368068.35524204 3263826.9500081586 4138110.3073055306 3239031.700634973 3826351.0809557103 3351197.5147349266 3984534.598629377 0.8958347811407908 1.0214477365333456 0.8106267533665603 0.8452852577564787 0.8191237569202859 1.0385429477081167 0.812900884773131 0.9603006289045453 0.8410511771908545 1.0 21.925979793800852 NQSLGQS(ph)APSLTAGLK ddPTM_KYSE-520_SHP099_60min_R1 4 NQSLGQSAPSLTAGLK 16 0 Q6P0Q8;Q6P0Q8-2 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 NQSLGQS(1)APSLTAGLK;NQSLGQS(1)APSLTAGLK;NQSLGQS(0.992)APS(0.008)LTAGLK;NQSLGQS(0.988)APS(0.012)LTAGLK 334.44 1.6719000000000003e-58 1297050000.0 1846330.0 2118940.0 1602990.0 1411180.0 1566480.0 1865100.0 1468780.0 2068040.0 2309290.0 2227520.0 True False 1743910.3943323947 2017142.9418062156 1706321.300274682 1545298.1229132616 1689753.0639480124 1853459.2190762851 1617258.6163114125 2060866.4519241634 1889981.148463552 2207785.9057843387 0.7898910803639959 0.9136497051282718 0.7728653832802206 0.6999311477007906 0.76536092540536 0.8395103955597654 0.7325251112774293 0.9334539397704957 0.8560527284424876 1.0 21.07416884667631 -7.850941395922929 1.031335938338498 0.9919052889478712 0.7895537821853182 0.49226976433979774 0.06485345723740778 0.43582953016457776 1.0170601136991329 0.06314084748517342 0.021339301577393933 1.4094789819158832e-08 7.850941395922929 -0.20235150676255298 NQSLLASSEWPELRLS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 NQSLLASSEWPELRLSK 17 1 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 NQSLLASSEWPELRLS(1)K;NQSLLASSEWPELRLS(1)K 108.96 0.00014052 1230040000.0 424390.0 468350.0 371917.0 383730.0 433870.0 458470.0 374710.0 375170.0 461860.0 397390.0 True False 400848.2406995092 445849.7629923174 395891.36490824004 420199.5838273683 468013.10061738704 455608.5186691886 412589.3436171855 373868.6228353366 377997.8665431265 393869.43376474135 1.0177185796523025 1.1319735038353445 1.0051335061067632 1.066849945198728 1.188244277155388 1.1567501298953908 1.0475282117566542 0.9492196925812952 0.9597034807451067 1.0 18.587357935392106 -7.084125944577164 4.272845581343482 0.96745695749196 1.0956926959924824 0.5045285814666687 0.05512397761690645 0.19773974841436395 6.498461219473363 0.02885736913587031 0.016351667403547102 8.238991511718359e-08 7.084125944577164 0.1282357385005224 NQSPTEAEKPASSSLPS(ph)SPPPQLLTR ddPTM_KYSE-520_SHP099_60min_R1 6 NQSPTEAEKPASSSLPSSPPPQLLTR 26 1 Q99567;I3L2W3 Q99567 NUP88 Nuclear pore complex protein Nup88 1 NQSPTEAEKPASSSLPS(0.436)S(0.436)PPPQLLT(0.129)R;NQSPTEAEKPAS(0.001)S(0.001)S(0.002)LPS(0.497)S(0.497)PPPQLLT(0.002)R;NQSPTEAEKPASSS(0.001)LPS(0.499)S(0.499)PPPQLLT(0.002)R;NQSPTEAEKPASSS(0.066)LPS(0.569)S(0.365)PPPQLLTR;NQSPTEAEKPAS(0.001)S(0.001)S(0.004)LPS(0.561)S(0.434)PPPQLLTR;NQSPTEAEKPAS(0.025)S(0.019)S(0.019)LPS(0.468)S(0.468)PPPQLLTR 165.1 2.6082e-10 17542660000.0 5034660.0 5888470.0 4263330.0 4741910.0 4248910.0 5786160.0 4328550.0 5678640.0 6044250.0 5627240.0 True False 4755377.373454118 5605579.062426333 4538151.073369184 5192579.700692776 4583275.044009084 5750046.429172933 4766122.076577003 5658942.123244537 4946766.563143143 5577387.031526474 0.8526174257899078 1.0050547022719603 0.8136697431462162 0.9310058045714678 0.8217602648161012 1.0309570407559117 0.854543901944808 1.0146224551491707 0.8869326326434376 1.0 22.411157956689678 -6.255356557050105 24.999417205719705 0.9518959026014814 0.8901141194972693 0.1955118306326028 0.072802742914561 942.7942447000232 3874736.2383911526 0.022612320979010097 0.022077390904825737 5.554480455373861e-07 6.255356557050105 -0.06178178310421212 NQSRS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 6 NQSRSPIK 8 1 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 NQS(0.003)RS(0.997)PIK;NQS(0.011)RS(0.989)PIK;NQS(0.036)RS(0.964)PIK;NQS(0.002)RS(0.998)PIK;NQS(0.006)RS(0.994)PIK;NQS(0.04)RS(0.96)PIK 81.525 0.0061254 4048950000.0 6191330.0 5895140.0 5633210.0 4675140.0 5250400.0 5265650.0 4613440.0 4250320.0 7039980.0 4864830.0 True False 5847884.58278963 5611928.625614454 5996335.730054676 5119463.899967904 5663576.609310458 5232785.125156308 5079811.538035469 4235576.631952145 5761697.095453774 4821731.39098047 1.2128184066264416 1.1638824668068668 1.2436063405090172 1.0617480495791143 1.174593968445597 1.0852502349974855 1.0535243724977637 0.8784347962383832 1.1949436059900813 1.0 22.201119852845654 -6.106581401590064 0.8517890527285005 1.0184433363161645 1.1990364733467282 0.38988070345345316 0.0835701073746801 0.6021425694878956 0.9589198629984219 0.048520365444731296 0.05367551810002116 7.823815463511472e-07 6.106581401590064 0.1805931370305638 NQTAEKEEFEHQQK ddPTM_KYSE-520_SHP099_60min_R1 12 NQTAEKEEFEHQQK 14 1 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PS65;E9PM13 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ;;;;;;;;;;; 268.38 8.336799999999999e-25 45160520000.0 33122870.0 26250950.0 19681170.0 20843300.0 34632210.0 28316900.0 24424670.0 29171190.0 23881730.0 23677130.0 False True 31285478.372295674 24989814.95852071 20949849.7091854 22824240.965233363 37357567.89667985 28140163.723479267 26893754.00540782 29070001.9504969 19545409.841421574 23467369.048728414 1.3331480962920677 1.064875014605644 0.8927225572531989 0.9725947939813944 1.5918941667090747 1.1991188132358641 1.1460063524617843 1.238741415372767 0.8328760587024836 1.0 24.484152773089573 -7.759041986613799 24.964375937157616 0.916437988820872 1.172817187373909 0.2395541433369015 0.18741582822955483 92.53212350915658 963636.6541133128 0.14991519340822426 0.05056789804546484 1.7416384875600618e-08 7.759041986613799 0.25637919855303704 NQTYS(ph)FS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 4 NQTYSFSPSK 10 0 Q86YS7;Q86YS7-3;H0YFE9 Q86YS7 C2CD5 C2 domain-containing protein 5 2 NQTY(0.011)S(0.989)FS(0.997)PS(0.003)K;NQT(0.003)Y(0.006)S(0.991)FS(0.976)PS(0.024)K;NQT(0.021)Y(0.057)S(0.923)FS(0.996)PS(0.004)K;NQTY(0.001)S(0.999)FS(0.998)PS(0.002)K 114.7 0.00064037 1887150000.0 5908600.0 5024300.0 4324270.0 5146290.0 4929010.0 4716400.0 4680520.0 4711710.0 5177500.0 4538040.0 True False 5580838.179497914 4782925.086371948 4603019.363276631 5635391.854311494 5316895.044769417 4686963.198140254 5153672.639073178 4695366.177731376 4237396.514153716 4497836.496141691 1.2407828039736968 1.0633834934806567 1.0233852135855022 1.2529116741227955 1.1821005608652795 1.0420483719585625 1.1458114681345293 1.0439165989602177 0.9420966097341724 1.0 22.10079978702218 -7.4755992070616575 3.144703228386826 0.9720847220558051 1.1313922042953284 0.4430210297614109 0.07473720644862611 0.2535004376731039 4.893838016696824 0.05485092034926762 0.020661997718546116 3.3450359756480305e-08 7.4755992070616575 0.1593074822395233 NQTYSFS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 6 NQTYSFSPSK 10 0 Q86YS7;Q86YS7-3;H0YFE9 Q86YS7 C2CD5 C2 domain-containing protein 5 1 NQT(0.013)Y(0.003)S(0.34)FS(0.643)PS(0.001)K;NQT(0.005)Y(0.002)S(0.062)FS(0.929)PS(0.002)K;NQTYSFS(1)PSK;NQTYSFS(0.998)PS(0.002)K;NQTYSFS(1)PSK;NQTYS(0.014)FS(0.802)PS(0.184)K 248.67 6.3173e-14 14018670000.0 16795200.0 14158500.0 12958260.0 12786190.0 13319400.0 13575730.0 12640290.0 13884400.0 15924800.0 13227480.0 True False 15863536.775598865 13478304.407658216 13793570.173549064 14001385.6532918 14367561.002980677 13490998.833408639 13918093.870542234 13836238.257043313 13033257.751539385 13110294.818023715 1.2100061055675162 1.0280702756682916 1.0521174668464357 1.0679687869446715 1.0958991542454486 1.029038554866176 1.061615628308219 1.0553720148246848 0.9941239256970468 1.0 23.64419679277032 -4.257303657833874 24.98544472277707 1.04733215572175 1.2100061698265718 0.7384908517350255 0.02975450559757511 216.13968837719193 1305731.9320400234 0.007280868942947367 0.05522014617817024 5.529633431539464e-05 4.257303657833874 0.16267401410482174 NQVEEDAEDS(ph)GEADDEEKPEIHKPGQNSFSK ddPTM_KYSE-520_SHP099_60min_R1 4 NQVEEDAEDSGEADDEEKPEIHKPGQNSFSK 31 2 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 NQVEEDAEDS(1)GEADDEEKPEIHKPGQNSFSK;NQVEEDAEDS(1)GEADDEEKPEIHKPGQNSFSK;NQVEEDAEDS(1)GEADDEEKPEIHKPGQNSFSK;NQVEEDAEDS(1)GEADDEEKPEIHKPGQNSFSK 270.94 1.0052e-41 8019470000.0 1927780.0 2632210.0 2344810.0 6207420.0 2512130.0 2270350.0 2288990.0 2215720.0 2980490.0 1949360.0 True False 1820842.2004658452 2505754.680572243 2495960.2044286476 6797371.330471117 2709820.3389355247 2256179.90350643 2520383.4475896084 2208034.184472934 2439308.1480386285 1932090.1869791304 0.9424209142704544 1.2969139315851765 1.291844563597283 3.5181439128879233 1.40253304799006 1.16774047024897 1.304485403722426 1.142821489055461 1.2625229217961846 1.0 20.881731007840912 -5.988441176747981 24.999688513276 1.2027936359335332 1.7910875456036108 0.15137671388192497 0.652400897275815 463.9687016060057 1003475.9068944452 0.21439125622210467 0.24290722724833355 1.0269725210993458e-06 5.988441176747981 0.5882939096700777 NQVIIPLVLS(ph)PDRDEDLMR ddPTM_KYSE-520_SHP099_60min_R1 13 NQVIIPLVLSPDRDEDLMR 19 1 Q96G25;Q96G25-2 Q96G25 MED8 Mediator of RNA polymerase II transcription subunit 8 1 NQVIIPLVLS(1)PDRDEDLMR;NQVIIPLVLS(1)PDRDEDLMR;NQVIIPLVLS(1)PDRDEDLMR;NQVIIPLVLS(1)PDRDEDLMR;NQVIIPLVLS(1)PDRDEDLMR;NQVIIPLVLS(1)PDRDEDLMR;NQVIIPLVLS(1)PDRDEDLMR;NQVIIPLVLS(1)PDRDEDLMR;NQVIIPLVLS(1)PDRDEDLMR;NQVIIPLVLS(1)PDRDEDLMR;NQVIIPLVLS(1)PDRDEDLMR;NQVIIPLVLS(1)PDRDEDLMR;NQVIIPLVLS(1)PDRDEDLMR 255.58 2.0846e-27 5278162000.0 2452973.0 2577889.0 2187580.0 1840797.0 2040121.0 2459125.0 1952866.0 2349754.0 2877884.0 2441397.0 True False 2316901.697809555 2454043.342949726 2328594.9070517533 2015745.7934242003 2200666.9159993622 2443776.688708899 2150280.7534154905 2341603.2518107034 2355332.811151861 2419768.1219581235 0.9574891398828219 1.0141646716809651 0.9623215075531324 0.8330326261976786 0.9094536356725534 1.0099218460367796 0.888630912153451 0.9676973717282599 0.9733712870164931 1.0 21.20643737495256 -7.776351264650729 2.2282897684849368 0.9960848357403256 0.9402536973527291 0.12177592218737876 0.051619721446130196 0.6875791618144746 6.5404852632339585 0.051540476786000065 0.014761889980925563 1.6735887018887712e-08 7.776351264650729 -0.05583113838759646 NQWIDNVEK ddPTM_KYSE-520_SHP099_60min_R1 1 NQWIDNVEK 9 0 P18206-2;P18206 P18206-2 VCL Vinculin 0 156.83 0.016177 0.0 448160.0 406260.0 328160.0 299560.0 493110.0 397610.0 331150.0 412130.0 420620.0 378000.0 False True 423299.67141518864 386742.65979130805 349313.7186745649 328030.0923340022 531914.9515878949 395128.36850405915 364625.8737125538 410700.4172218648 344246.01096732746 374651.21407955023 1.1298499924927743 1.0322738730247125 0.9323704436211826 0.8755612687387451 1.419760384054041 1.0546565809877797 0.9732408704676779 1.0962207028499318 0.9188439754908501 1.0 18.515188601055424 -7.759608881825695 24.99977432756616 0.9594219766777901 1.0609888612666634 0.0813794035882136 0.1405289145039269 134.46833867008706 1836700.939148431 0.11034005689994805 0.03680379833065828 1.7393665673535572e-08 7.759608881825695 0.10156688458887331 NRDEAIK ddPTM_KYSE-520_SHP099_60min_R1 6 NRDEAIK 7 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ;;;;; 138.54 0.0018869 6173800000.0 5701070.0 5298650.0 2644710.0 2564900.0 6009180.0 7486570.0 3847410.0 4520790.0 4508540.0 9077890.0 False True 5384820.282298713 5044094.9005642 2815192.238285619 2808667.3248346974 6482068.278442824 7439843.539627867 4236343.7499031145 4505108.434650321 3689902.7870444423 8997466.957091544 0.5984818069328449 0.5606127729747971 0.31288719944303495 0.3121620049541818 0.720432573896128 0.8268820074703355 0.47083737790936264 0.5007085278706719 0.41010462218326543 1.0 23.1010874682327 -5.769364645680433 24.9979150062404 0.6292661571587678 0.44470937406555366 0.22517993039058748 0.18614268287086796 322.3447350685231 1016739.152961223 0.05964269975693489 0.06883386191383876 1.700729928769356e-06 5.769364645680433 -0.1845567830932141 NRDS(ph)DKTDTDWR ddPTM_KYSE-520_SHP099_60min_R1 4 NRDSDKTDTDWR 12 2 E7EX17;P23588-2;P23588;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 NRDS(0.795)DKT(0.181)DT(0.023)DWR;NRDS(0.774)DKT(0.196)DT(0.03)DWR;NRDS(0.718)DKT(0.235)DT(0.048)DWR;NRDS(0.803)DKT(0.163)DT(0.034)DWR 119.56 9.8518e-05 3490940000.0 4743060.0 3996910.0 4069830.0 4055630.0 4256250.0 4111730.0 4108250.0 4162680.0 4521540.0 3726270.0 True False 4479953.0067443 3804892.444115777 4332177.753758234 4441075.8558303835 4591192.660250203 4086067.167901197 4523552.002656191 4148240.634656816 3700542.3147477745 3693258.146794191 1.2130083597413772 1.030226508108697 1.1729961951126096 1.2024818410501066 1.243128012656097 1.106358398328579 1.2248133823471583 1.1231927121740886 1.0019722877914468 1.0 21.81646267510728 -7.686645925381901 3.660800266315151 0.9969255561219378 1.1671354933544407 0.5586533727657403 0.05927092668106935 0.17212332506485473 4.299355628617081 0.04970960090740645 0.015527985834342728 2.0575674201854096e-08 7.686645925381901 0.17020993723250288 NRDSDKT(ph)DTDWR ddPTM_KYSE-520_SHP099_60min_R1 1 NRDSDKTDTDWR 12 2 E7EX17;P23588-2;P23588;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 NRDS(0.218)DKT(0.679)DT(0.103)DWR 121.79 0.00027056 1547600000.0 2422300.0 2055300.0 2097100.0 2106000.0 2236500.0 2226400.0 2236100.0 2360800.0 2557400.0 2106500.0 True False 2287930.190264668 1956560.3029318051 2232282.4214786366 2306153.6068080114 2412499.8260556967 2212504.211758853 2462146.810232952 2352610.9358148626 2093040.6268076708 2087838.048832202 1.0958370030397635 0.9371226393858351 1.0691837054733373 1.1045653699519082 1.155501418036274 1.0597106480535599 1.1792805536857196 1.1268167744767161 1.002491849393385 1.0 20.993578377396606 -4.988945548109771 24.476057005160612 1.099236864338748 1.013148119107416 0.15001735200244037 0.06614297895445709 241.83730636796201 535449.5980328408 0.016503639611150717 0.03430229967598463 1.0257805306655372e-05 4.988945548109771 -0.08608874523133192 NREEEWDPEYT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 NREEEWDPEYTPK 13 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 NREEEWDPEYT(1)PK;NREEEWDPEYT(1)PK;NREEEWDPEY(0.022)T(0.978)PK;NREEEWDPEYT(1)PK;NREEEWDPEYT(1)PK;NREEEWDPEYT(1)PK;NREEEWDPEYT(1)PK;NREEEWDPEY(0.008)T(0.992)PK;NREEEWDPEY(0.017)T(0.983)PK 244.56 1.7690999999999999e-15 9292950000.0 11810570.0 10830150.0 9544380.0 9242810.0 9364910.0 9646350.0 9458040.0 8813510.0 11161980.0 9986870.0 True False 11155414.138312416 10309853.33761342 10159626.006347952 10121243.883447833 10101875.137950946 9586143.551518144 10414150.98477513 8782937.990898693 9135245.802617766 9898394.101467285 1.126992320568323 1.0415682818776777 1.026391342090728 1.0225137309846568 1.0205569746362693 0.968454423338948 1.0521051069517824 0.8873093858322691 0.9229018069975216 1.0 23.23876305312473 -1.0000264961794445 0.2867191027742701 0.9481011042296468 2.278218666170873 0.5562876793063841 0.04283971009271856 39.886466633819204 0.565101608942522 0.047301231843372545 26.79678915670483 0.09999389921532442 1.0000264961794445 1.3301175619412262 NREELDK ddPTM_KYSE-520_SHP099_60min_R1 1 NREELDK 7 1 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 Keratin, type I cytoskeletal 18 0 101.72 0.0052786000000000005 1036800000.0 2024200.0 1945400.0 1332800.0 1372500.0 2185900.0 2389200.0 1701700.0 2171700.0 2153700.0 2456400.0 False True 1911913.5908573405 1851940.0638950681 1418714.4205554 1502941.9873428275 2357917.8939303146 2374288.116571262 1873724.4429915547 2164166.87957859 1762642.370358835 2434638.2070502797 0.7852967990565409 0.7606633538125619 0.5827208397728479 0.6173163564880295 0.968488002489324 0.9752118855671227 0.7696110401806648 0.888906973246188 0.7239853401029097 1.0 21.215275969691554 -5.757742202945278 24.9999574155454 0.8806169845037236 0.6843840068624217 0.49528383481349547 0.09933871171176777 88.5231730316452 598580.8351891338 0.031032095719607824 0.03851103777846919 1.746858779988851e-06 5.757742202945278 -0.19623297764130188 NREELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELR ddPTM_KYSE-520_SHP099_60min_R1 9 NREELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELR 38 2 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;;;;;;; 281.42 1.0560999999999999e-53 2554004000.0 1229450.0 1133285.0 845159.6 2112325.0 819094.3 706528.8 884401.0 1360853.0 1057523.0 525344.1 False True 1161249.9576521877 1078840.2875045354 899639.940119172 2313079.7329063294 883552.3614009463 702119.0916856484 973804.884001983 1356132.5185684795 865503.4811853957 520689.95998552453 2.23021384488472 2.07194371010059 1.7277843040111287 4.442335959331028 1.6968876477386072 1.3484398502808999 1.8702202055692707 2.6044913917798236 1.6622242556961482 1.0 18.99006506319159 NREELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELRR ddPTM_KYSE-520_SHP099_60min_R1 2 NREELDKYWSQQIEESTTVVTTQSAEVGAAETTLTELRR 39 3 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ; 202.52 2.2285e-16 466210000.0 249720.0 245063.0 185322.0 384638.0 142478.0 135570.0 146788.0 196675.0 212649.0 87936.0 False True 235867.53379552191 233289.80563293782 197268.15264568376 421193.8798743687 153690.20801107274 134723.85734286203 161626.76355282622 195992.78032929014 174037.30204505546 87156.95545317273 2.70623879148977 2.676663089250274 2.2633667229423935 4.832590556707385 1.7633728394017465 1.5457613984146774 1.8544333348089959 2.2487336703103655 1.9968263134037694 1.0 16.411328180990363 NREELGFRPEYSASQLK ddPTM_KYSE-520_SHP099_60min_R1 1 NREELGFRPEYSASQLK 17 2 P09874 P09874 PARP1 Poly [ADP-ribose] polymerase 1 0 77.468 0.006799600000000001 327830000.0 112430.0 102660.0 74115.0 72356.0 110570.0 101130.0 78980.0 111690.0 103720.0 99284.0 False True 106193.28377635143 97728.0595041984 78892.57148819277 79232.6924853753 119271.22994275819 100498.81015773116 86964.06917051932 111302.57345864204 84887.06256842552 98404.42100178327 1.0791515533070106 0.9931267163538048 0.8017177550057746 0.8051741139144496 1.2120515392351812 1.0212834863985425 0.883741485242247 1.131072896172267 0.8626346428773481 1.0 16.586435512330134 -4.308641575814001 4.751399903539685 0.9675632225377974 1.0818006564989326 0.06623519917572007 0.1275233838972542 0.5352071086956502 26.360312553107036 0.03283258206745794 0.16819259177644497 4.913131907272235e-05 4.308641575814001 0.11423743396113528 NRENS(ph)PSSQSAGLSSINK ddPTM_KYSE-520_SHP099_60min_R1 4 NRENSPSSQSAGLSSINK 18 1 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2 H3BSS6 ZNF106 Zinc finger protein 106 1 NRENS(0.975)PS(0.012)S(0.012)QS(0.001)AGLSSINK;NRENS(0.897)PS(0.092)S(0.01)QS(0.001)AGLSSINK;NRENS(0.473)PS(0.048)S(0.473)QS(0.007)AGLSSINK;NRENS(0.965)PS(0.032)S(0.003)QSAGLSSINK 338.53 1.1594e-53 1825850000.0 3319670.0 2998970.0 2749990.0 2694430.0 2657050.0 2979400.0 2753130.0 2967180.0 3749370.0 2905050.0 True False 3135521.287501921 2854894.9796542535 2927258.75553957 2950507.8170900783 2866144.7184535214 2960804.459447686 3031443.248359482 2956887.5451250174 3068578.9219261273 2879313.517094697 1.0889822413870875 0.9915193196935767 1.0166516213535688 1.0247261368283431 0.995426410301278 1.0283022122701024 1.0528354173179055 1.0269418483154953 1.0657328226703162 1.0 21.457293456152495 -6.528115907675817 24.617513587360406 1.0389006991775367 1.0204271445308046 0.03309669912274149 0.029603469383689875 331.50199236344764 1558220.2646311347 0.010704266522629438 0.00832087625760634 2.964040219301197e-07 6.528115907675817 -0.01847355464673206 NRENS(ph)SPCQGNGEQAGR ddPTM_KYSE-520_SHP099_60min_R1 2 NRENSSPCQGNGEQAGR 17 1 Q5T5X7 Q5T5X7 BEND3 BEN domain-containing protein 3 1 NRENS(0.5)S(0.5)PCQGNGEQAGR;NRENS(0.894)S(0.106)PCQGNGEQAGR 86.546 0.0010852 0.0 33535.0 31416.0 33878.0 29853.0 27617.0 29892.0 28909.0 28827.0 41585.0 28725.0 True False 31674.746699634863 29906.728203622624 36061.830086716545 32690.220144368286 29790.30078076471 29705.432940125593 31831.40384465111 28727.00586527237 34034.212272541256 28470.51884771184 1.1125454674381723 1.050445492883113 1.2666376148467984 1.1482130100693821 1.0463560899649338 1.0433751874709163 1.1180479012313254 1.0090088634819925 1.195419460199847 1.0 14.797181164593102 -5.750903626303335 24.82834830237346 1.0703527236442514 1.146472013772135 0.20668030760074663 0.07262756248368703 322.20000668756785 759286.313365217 0.021253173934240352 0.02714437757204508 1.7745832325470104e-06 5.750903626303335 0.07611929012788354 NREPVQLETLSIR ddPTM_KYSE-520_SHP099_60min_R1 2 NREPVQLETLSIR 13 1 J3QLI9;P62314 J3QLI9 SNRPD1 Small nuclear ribonucleoprotein Sm D1 0 ; 254.45 7.4958e-17 529140000.0 601840.0 496530.0 428310.0 371980.0 514040.0 527050.0 367870.0 452550.0 456380.0 458790.0 False True 568454.7354617037 472675.9534932757 455919.54792022984 407332.86736013513 554492.0235124847 523760.48545072885 405057.88966521836 450980.20967596374 373512.89640356845 454725.47753321845 1.2501053130900879 1.0394754128522432 1.0026259148563414 0.8957775349862133 1.2193995078535669 1.1518168902521353 0.8907745654863339 0.9917636727161805 0.8214030549372126 1.0 18.794636312654102 -6.769004807967186 24.996476280310127 0.925298938846375 1.0834036432288738 0.3632732300052459 0.10798477284027136 217.87512642064638 719859.942457033 0.04627051617625761 0.031874893504334555 1.702139664321875e-07 6.769004807967186 0.1581047043824988 NRHDKDQQHR ddPTM_KYSE-520_SHP099_60min_R1 7 NRHDKDQQHR 10 2 E9PM95;J3KQL8;Q9BQE5 E9PM95 APOL2 Apolipoprotein L2 0 ;;;;;; 84.26799999999999 0.0035373000000000006 577762000.0 142785.0 104373.0 41094.6 34072.50000000001 69359.3 209784.0 67278.1 53285.7 70586.20000000001 65764.8 False True 134864.43141515928 99358.76441293313 43743.623669684785 37310.74015572936 74817.4823095663 208474.66024057628 74079.22691898105 53100.864343675894 57769.52541329931 65182.17503624011 2.0690385268699165 1.5243241631272884 0.6710979442671884 0.572407105700067 1.1478211990926834 3.198338504731825 1.1364951672415708 0.8146531519415051 0.8862779645076357 1.0 15.992189873105566 -4.399806483198209 3.9119932150408654 1.2138914273783652 2.0535980975173085 0.12838378503832482 0.7059007160128352 0.5571725015012748 13.518954051693905 0.1938665879434176 0.9726047595993217 3.982846022187742e-05 4.399806483198209 0.8397066701389433 NRHS(ph)LVGPQQLGGR ddPTM_KYSE-520_SHP099_60min_R1 2 NRHSLVGPQQLGGR 14 1 M0R0S1;M0R2P6;Q8TBC3;M0QXA4;Q8TBC3-2 M0R0S1 SHKBP1 SH3KBP1-binding protein 1 1 NRHS(1)LVGPQQLGGR;NRHS(1)LVGPQQLGGR 130.56 2.1075e-05 1651430000.0 584720.0 400440.0 476500.0 608060.0 563230.0 503690.0 479500.0 534910.0 647780.0 580430.0 True False 552284.4159895781 381202.2613273056 507215.9524269568 665849.8395800947 607552.9966596698 500546.28387568105 527972.5394690302 533054.5220589325 530159.4812049239 575287.8417677068 0.9600140588623509 0.662628746256782 0.8816733391556074 1.1574203229015148 1.0560852369012714 0.8700797192891044 0.9177536897819895 0.9265874982182788 0.9215551637174959 1.0 19.133924454815773 -5.00270281074822 24.999791850573896 0.9753094145202549 0.8015287894957662 0.3078511554637212 0.10215617400737378 127.116989309133 1175821.935624679 0.027601517870326508 0.05587724893483194 9.93795873826377e-06 5.00270281074822 -0.17378062502448866 NRHS(ph)PDHPGMGSSQASSSSSLR ddPTM_KYSE-520_SHP099_60min_R1 1 NRHSPDHPGMGSSQASSSSSLR 22 1 J3KR33;A0JLT2 J3KR33 MED19 Mediator of RNA polymerase II transcription subunit 19 1 NRHS(1)PDHPGMGSSQASSSSSLR 181.05 1.2681e-10 432520000.0 28521.0 47733.0 140670.0 238650.0 25312.0 48513.0 24787.0 18708.0 24286.0 26772.0 True False 26938.883274796055 45439.835031306306 149737.81327995795 261331.22424726145 27303.910394420676 48210.212372016336 27292.71185780785 18643.106314480032 19876.274600238943 26534.820908300826 1.0152276274217786 1.7124605886106232 5.643068547454029 9.848614586485105 1.0289841596737237 1.8168659414970783 1.028562127934692 0.7025902446791322 0.74906383084052 1.0 14.69559919113756 NRMGRQPPPPT(ph)QQHSITDNSLSLK ddPTM_KYSE-520_SHP099_60min_R1 1 NRMGRQPPPPTQQHSITDNSLSLK 24 2 F8VUA1;A0A494C1T1;A0A1B0GW90;E9PS57;I3L0I5;O75200;E9PJ23;F8W1W9;E9PQR5;A6NHN6 F8VUA1 NPIPB9;NPIPB6;NPIPB7;NPIPB8;NPIPB15 Nuclear pore complex-interacting protein family member B7;Nuclear pore complex-interacting protein family member B6;Nuclear pore complex-interacting protein family member B9;Nuclear pore complex-interacting protein family member B8;Nuclear pore complex-interacting protein family member B15 1 NRMGRQPPPPT(0.333)QQHS(0.333)IT(0.333)DNS(0.002)LSLK 61.703 0.018105 48700000.0 110840.0 109330.0 119890.0 120620.0 88121.0 78348.0 97604.0 123910.0 131320.0 99322.0 True False 104691.48424593799 104077.62269232428 127618.3012307825 132083.68853427464 95055.6213600958 77859.00107028507 107470.76484324357 123480.18513081138 107475.59830780611 98442.08435134667 1.0634830107039055 1.0572472472328398 1.2963795115847392 1.3417400637603196 0.9655994383543898 0.7909117486013488 1.0917156574994178 1.2543434644283027 1.0917647570750149 1.0 16.58698758439465 NRNS(ph)ASQVASSLENMDMNPECFVSPR ddPTM_KYSE-520_SHP099_60min_R1 3 NRNSASQVASSLENMDMNPECFVSPR 26 1 Q9BQL6-2;Q9BQL6;G3V1L6;Q9BQL6-3 Q9BQL6-2 FERMT1 Fermitin family homolog 1 1 NRNS(0.749)AS(0.221)QVAS(0.015)S(0.015)LENMDMNPECFVSPR;NRNS(0.993)AS(0.007)QVASSLENMDMNPECFVSPR;NRNS(0.469)AS(0.132)QVAS(0.199)S(0.199)LENMDMNPECFVSPR 215.82 1.048e-21 1087400000.0 389189.0 456571.0 373359.0 335927.0 332968.0 430355.0 384095.0 411756.0 491682.0 397182.0 True False 367599.91034096334 434636.64383295673 397426.3185355219 367853.4010798649 359170.6872712339 427668.9948129183 422923.0710059587 410327.7145405732 402404.9430945685 393663.27648292045 0.9337927419219458 1.104082269791843 1.0095590375770414 0.9344366697507397 0.9123804752125944 1.0863827549112859 1.0743269597927754 1.0423317059354296 1.0222059489260673 1.0 18.586602609064578 -6.283193816971127 24.99701827754206 1.0495250461265624 0.9850461863254567 0.25928682294964955 0.05519370616530561 1281.3576594477695 1472343.8276225743 0.020707384461895944 0.018278221358846134 5.209621641881004e-07 6.283193816971127 -0.06447885980110568 NRPCLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 NRPCLSPK 8 1 A0A0G2JQJ7;A0A0G2JS76;A0A0G2JPD5;A0A0G2JMX7;P10636;P10636-9 A0A0G2JQJ7 MAPT Microtubule-associated protein tau 1 NRPCLS(1)PK 68.49 0.053683 0.0 499110.0 447300.0 418810.0 421840.0 421290.0 470250.0 366900.0 487540.0 627270.0 433310.0 True False 471423.3733488817 425811.0365890117 445807.16271969327 461931.5467691797 454443.1261877954 467314.99531961954 403989.8325989312 485848.8375326914 513373.58018989954 429471.21051007876 1.097683294740471 0.9914774871248765 1.038037362714517 1.0755821006501183 1.0581457268068277 1.0881171633474431 0.9406680185130837 1.1312721915763655 1.195362035048102 1.0 18.71220189835833 NRPDS(ph)GVEEAWK ddPTM_KYSE-520_SHP099_60min_R1 2 NRPDSGVEEAWK 12 1 K7EKI8;O60437;K7EQ71 K7EKI8 PPL Periplakin 1 NRPDS(1)GVEEAWK;NRPDS(1)GVEEAWK 130.95 4.2233e-05 1086860000.0 655020.0 731170.0 662290.0 756580.0 674230.0 656960.0 631970.0 752640.0 869530.0 753810.0 True False 618684.7348500026 696043.4956914554 704982.2731014666 828485.1357259287 727288.065156063 652859.6689530613 695855.6950328336 750029.2675074968 711645.27106752 747131.829855305 0.8280797446011925 0.9316207232480729 0.9435848466501535 1.1088874849387411 0.9734400758925167 0.8738212492961234 0.9313693611040478 1.0038780808639258 0.9525029487839414 1.0 19.511003300447527 -4.301654701952545 2.0854371120777495 0.9730908882045096 0.7962303630108712 0.37298569876384924 0.05730605672216569 0.7456579696912748 3.857267051002831 0.016543817177849078 0.2410791181640131 4.992812973352598e-05 4.301654701952545 -0.17686052519363837 NRPDYVS(ph)EEEEDDEDFETAVK ddPTM_KYSE-520_SHP099_60min_R1 8 NRPDYVSEEEEDDEDFETAVK 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NRPDY(0.252)VS(0.748)EEEEDDEDFETAVK;NRPDY(0.108)VS(0.892)EEEEDDEDFETAVK;NRPDYVS(1)EEEEDDEDFETAVK;NRPDY(0.114)VS(0.886)EEEEDDEDFETAVK;NRPDYVS(1)EEEEDDEDFETAVK;NRPDYVS(1)EEEEDDEDFETAVK;NRPDYVS(1)EEEEDDEDFETAVK;NRPDY(0.22)VS(0.78)EEEEDDEDFETAVK 224.79 1.6084000000000001e-19 2640550000.0 2768753.0 2542900.0 2395285.0 2151519.0 2434360.0 2244773.0 2300652.0 2415954.0 3094167.0 2479824.0 True False 2615164.7517177314 2420735.2670292845 2549688.9036915065 2355998.718882224 2625930.2823862997 2230762.5390507355 2533224.356359759 2407573.619461902 2532344.270402598 2457854.6886338755 1.0640029957065085 0.9848976337876091 1.0373635656665587 0.9585589944667294 1.0683830474314346 0.9076055429015772 1.0306648184184457 0.9795427006305565 1.0303067476336958 1.0 21.228968193666052 -4.25327643729771 23.855449847810664 0.9991902442932163 1.0640030579041653 0.16489515720471504 0.04339740676134237 925.0282102739679 2703190.5243691257 0.009826563208089473 0.10313610871179692 5.581148301750069e-05 4.25327643729771 0.06481281361094893 NRPDYVS(ph)EEEEDDEDFETAVKK ddPTM_KYSE-520_SHP099_60min_R1 2 NRPDYVSEEEEDDEDFETAVKK 22 2 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NRPDYVS(1)EEEEDDEDFETAVKK;NRPDYVS(0.998)EEEEDDEDFET(0.002)AVKK 220.99 9.9281e-20 608410000.0 246200.0 258040.0 254100.0 199941.0 209100.0 226630.0 190730.0 194122.0 290050.0 184031.0 True False 232542.79521246787 245643.37107406385 270479.6925743749 218943.33252554652 225554.9803837452 225215.51810586997 210010.84974541885 193448.63609041544 237384.23156548236 182400.62851395126 1.2749012824518935 1.346724367538434 1.4828879416590757 1.20034308165117 1.2365910261460156 1.2347299455091731 1.1513713053316357 1.060570008264084 1.3014441534521664 1.0 17.47675117516972 -6.517406213913664 0.24376685554853397 0.9896161048333642 1.4535151868697518 0.5126089907934295 0.09193677394514962 2.539407579709804 0.39898102502399485 0.2041690636592281 0.4052095554338388 3.038042087650988e-07 6.517406213913664 0.46389908203638763 NRPEDYQGGR ddPTM_KYSE-520_SHP099_60min_R1 5 NRPEDYQGGR 10 1 Q15084-3;Q15084;Q15084-4;Q15084-5;Q15084-2 Q15084-3 PDIA6 Protein disulfide-isomerase A6 0 ;;;; 175.49 3.1651e-05 7955750000.0 1814010.0 1637300.0 1141460.0 1123180.0 1669570.0 1639140.0 1251000.0 1517460.0 1432860.0 1451090.0 False True 1713383.2491607158 1558641.6503625968 1215040.338000575 1229926.68950362 1800955.6604461477 1628909.5192518905 1377463.2885834351 1512196.2854378284 1172688.7434611872 1438234.4715309371 1.1913100979542612 1.083718740730426 0.8448138061294125 0.8551642404971821 1.2521989259019148 1.1325757736275006 0.95774598359973 1.051425421494843 0.8153668728388298 1.0 20.455867463001045 -7.736166264834271 24.61442571595203 0.9076833840465486 1.0411025894086494 0.1486148386728049 0.1321020054848777 344.5563249410434 335578.0953250425 0.09469233257429907 0.03575704512804408 1.8358353795456702e-08 7.736166264834271 0.13341920536210083 NRPEPHSDENGSTT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 NRPEPHSDENGSTTPK 16 1 Q03701;C9J9W7 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 NRPEPHSDENGS(0.059)T(0.207)T(0.734)PK 105.91 0.001574 38976000.0 52653.0 46578.0 53010.0 60177.0 54469.0 41142.0 42770.0 48631.0 60336.0 41856.0 True False 49732.23312884675 44340.32296499666 56427.10941899888 65896.2039871252 58755.400413784 40885.21751714999 47093.60899497486 48462.31041156075 49380.50334678488 41485.18840347526 1.198794920374054 1.0688229865019059 1.3601748380699634 1.5884272561627082 1.4162982663196004 0.9855377085312934 1.1351909152961632 1.1681834475530792 1.1903164779323556 1.0 15.340308717670347 -6.255761519724888 24.99083097707127 1.1088162497804335 1.3286099942696414 0.3997382726995147 0.14086617805032817 593.5498013923636 2612483.9921863377 0.053396877991672455 0.05198501645487734 5.549303532887323e-07 6.255761519724888 0.21979374448920797 NRPGPQTR ddPTM_KYSE-520_SHP099_60min_R1 2 NRPGPQTR 8 1 O14744-4;O14744-3;O14744-5;O14744-2;O14744;G3V5L5;G3V580;G3V2L6;C9JSX3 O14744-4 PRMT5 Protein arginine N-methyltransferase 5;Protein arginine N-methyltransferase 5, N-terminally processed 0 ; 76.827 0.016363 274610000.0 193571.0 176762.0 142571.0 131317.0 183490.0 192163.0 133496.0 168983.0 159020.0 146310.0 False True 182833.23075577806 168270.0881948287 151761.35478166543 143797.32819810425 197929.61908471276 190963.63943775423 146991.0784754072 168396.8374139286 130145.97656798143 145013.8072274575 1.2607987766916562 1.1603728735353676 1.0465303799908119 0.991611288244814 1.364901886716591 1.3168652219317527 1.0136350550733995 1.1612469228519342 0.8974729996837092 1.0 17.14583074481665 -7.558559787997897 1.8457421615771998 0.955837656551942 1.170926424629044 0.3037110541251824 0.1234811118800631 0.48724753067254395 2.989945544980938 0.11593402148569198 0.0369881251431466 2.7633774672280702e-08 7.558559787997897 0.2150887680771021 NRPGS(ph)ALEK ddPTM_KYSE-520_SHP099_60min_R1 1 NRPGSALEK 9 1 P31930 P31930 UQCRC1 Cytochrome b-c1 complex subunit 1, mitochondrial 1 NRPGS(1)ALEK 53.251999999999995 0.065606 0.0 74509.0 70440.0 74296.0 73969.0 88708.0 70773.0 78800.0 56236.0 78872.0 66025.0 True False 70375.8372399909 67055.95666740439 79085.23903780311 80998.99152040922 95688.81492052275 70331.27945508869 86765.87301388869 56040.93044158109 64550.83300131955 65440.0698666727 1.075424237525637 1.024692620347501 1.2085139762064898 1.2377583288868153 1.4622358306688656 1.0747433430065298 1.3258829519996707 0.8563702721552503 0.9864114316020005 1.0 15.99788666811408 -7.266798994760403 24.995844217963295 0.9410431315700938 1.2013729995762574 0.4565930286292028 0.12678519911156935 425.9623559523968 1986561.2469147372 0.06963162809506802 0.03501665754370139 5.410046590982968e-08 7.266798994760403 0.26032986800616364 NRPLLDFVSMEELNDMDDYDS(ph)EDDNDWRPTVVK ddPTM_KYSE-520_SHP099_60min_R1 10 NRPLLDFVSMEELNDMDDYDSEDDNDWRPTVVK 33 2 A0A0U1RRH6;O94880 A0A0U1RRH6 PHF14 PHD finger protein 14 1 NRPLLDFVSMEELNDMDDY(0.046)DS(0.954)EDDNDWRPTVVK;NRPLLDFVSMEELNDMDDYDS(1)EDDNDWRPTVVK;NRPLLDFVSMEELNDMDDYDS(1)EDDNDWRPTVVK;NRPLLDFVSMEELNDMDDYDS(1)EDDNDWRPTVVK;NRPLLDFVSMEELNDMDDYDS(1)EDDNDWRPTVVK;NRPLLDFVSMEELNDMDDYDS(1)EDDNDWRPTVVK;NRPLLDFVSMEELNDMDDYDS(1)EDDNDWRPTVVK;NRPLLDFVSMEELNDMDDYDS(1)EDDNDWRPTVVK;NRPLLDFVSMEELNDMDDY(0.006)DS(0.993)EDDNDWRPTVVK;NRPLLDFVSMEELNDMDDY(0.194)DS(0.805)EDDNDWRPTVVK 419.76 1.6140999999999993e-132 5039512000.0 619800.0 670722.6 617330.4 659971.6 654140.6 658494.3 600615.0 671668.0 842393.0 575599.8 True False 585418.4584593314 638500.079520852 657124.5053475637 722695.1024363037 705617.7436691123 654384.3928176411 661331.0256375227 669338.1404764898 689435.6661994193 570500.4335818675 1.026149015845267 1.1191929785435062 1.1518387483456058 1.2667739757862886 1.2368399779101225 1.147035750190602 1.1592121350116746 1.17324738260771 1.2084752712120148 1.0 19.121868457403306 -4.408549567201736 2.0175948449203513 1.1794208267808066 1.0079617490748163 0.28190381141623355 0.06779757661629678 0.6150786587391497 3.4470496446055416 0.017738910364341186 0.1737204406039569 3.903466286505893e-05 4.408549567201736 -0.17145907770599034 NRPLS(ph)DEELDAMFPEGYK ddPTM_KYSE-520_SHP099_60min_R1 7 NRPLSDEELDAMFPEGYK 18 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 NRPLS(1)DEELDAMFPEGYK;NRPLS(1)DEELDAMFPEGYK;NRPLS(1)DEELDAMFPEGYK;NRPLS(1)DEELDAMFPEGYK;NRPLS(1)DEELDAMFPEGYK;NRPLS(1)DEELDAMFPEGYK;NRPLS(1)DEELDAMFPEGYK 180.37 2.4165e-09 854086000.0 1258835.0 1206508.0 1024825.0 1120049.0 1147896.0 1214465.0 1158381.0 1100659.0 1369362.0 1179812.0 True False 1189004.9131246416 1148545.5446745716 1090886.8592779762 1226498.1202049882 1238228.8845651834 1206885.073452083 1275481.456189104 1096841.0708247416 1120720.3796068693 1169359.7835598455 1.0167999018274692 0.9822003123607435 0.9328924037023262 1.0488629226423352 1.0588947062944836 1.0320904570345324 1.0907519431754318 0.93798425963108 0.9584050994084089 1.0 20.157287449663066 -3.8241577130446567 17.088586547883267 1.0066683249593458 11.265109344142196 0.003793660063240334 0.05035592831308824 2648.3118790005556 257951.6788561997 0.01307317668870512 2423.9643036282127 0.00014991403272696837 3.8241577130446567 10.25844101918285 NRPT(ph)SISWDGLDSGK ddPTM_KYSE-520_SHP099_60min_R1 7 NRPTSISWDGLDSGK 15 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 NRPT(0.681)S(0.317)IS(0.002)WDGLDSGK;NRPT(0.608)S(0.365)IS(0.026)WDGLDS(0.001)GK;NRPT(0.496)S(0.496)IS(0.009)WDGLDSGK;NRPT(0.909)S(0.089)IS(0.002)WDGLDSGK;NRPT(0.415)S(0.415)IS(0.17)WDGLDSGK;NRPT(0.855)S(0.137)IS(0.009)WDGLDSGK;NRPT(0.705)S(0.225)IS(0.064)WDGLDS(0.005)GK 205.98 1.5138e-11 21657570000.0 16057020.0 13973260.0 13903120.0 12998400.0 14369080.0 13236970.0 12937450.0 14066800.0 16408750.0 14396750.0 True False 15166305.091724213 13301963.61530913 14799337.36097854 14233764.027888522 15499844.847118473 13154353.16022528 14245293.703344326 14018005.554015785 13429334.63092609 14269205.995502021 1.0628695875933796 0.9322147020305273 1.037152127850956 0.9975161920274561 1.086244381923169 0.9218700160591858 0.9983242030309722 0.9823956258277146 0.9411409881642554 1.0 23.766401723046116 -6.277904746409344 24.921195697715874 0.9694945267241499 1.0174930069715813 0.26751379109950957 0.044546518518044816 1235.9343433760403 1870645.3497340286 0.015130285110393991 0.013380402425431419 5.273455111658427e-07 6.277904746409344 0.04799848024743136 NRPTS(ph)ISWDGLDSGK ddPTM_KYSE-520_SHP099_60min_R1 5 NRPTSISWDGLDSGK 15 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 NRPT(0.055)S(0.943)IS(0.001)WDGLDSGK;NRPTS(0.999)IS(0.001)WDGLDSGK;NRPT(0.239)S(0.758)IS(0.002)WDGLDSGK;NRPT(0.138)S(0.716)IS(0.138)WDGLDS(0.008)GK;NRPT(0.006)S(0.536)IS(0.458)WDGLDSGK 248.7 7.284399999999999e-19 7758140000.0 6498700.0 5635400.0 5340970.0 5336620.0 5833300.0 5457650.0 5078280.0 5855160.0 6714320.0 6017300.0 True False 6138204.156162725 5364666.9250921495 5685257.472054146 5843810.760286691 6292347.523063144 5423586.7819375275 5591642.1016366845 5834849.816564616 5495168.7422332335 5963991.403388562 1.0292107652393967 0.8995094999707924 0.9532638609814147 0.979848957690719 1.0550564374536187 0.9093887658617361 0.93756709616645 0.9783464498707072 0.921391123922654 1.0 22.507846747418764 -4.208970405922907 22.144618032056332 0.9598933866771693 1.029212394162373 0.1826981000724972 0.0443001766937151 23750.006452112655 10022493.226321977 0.011134277440554551 9.863139057719088 6.18058514991173e-05 4.208970405922907 0.0693190074852037 NRPTSISWDGLDS(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 1 NRPTSISWDGLDSGK 15 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 NRPT(0.184)S(0.24)IS(0.055)WDGLDS(0.522)GK 121.92 0.00017514 1843400000.0 937900.0 865750.0 914090.0 851410.0 879540.0 854020.0 867380.0 872800.0 1059500.0 898980.0 True False 885872.8173427039 824158.0704827565 973013.703995712 932327.7504142498 948754.7941019578 848689.7443973658 955063.23521303 869772.4605130524 867121.5078215081 891015.7365958568 0.9942280264624713 0.9249646629491288 1.0920275187429684 1.0463650776542133 1.064801389172647 0.9524969195715911 1.0718814449471654 0.9761583603854577 0.9731831573866057 1.0 19.765091386440258 -9.355311662118668 12.007960470340631 1.0 1.0122651483894094 0.0028289106863129687 0.05309336698065031 0.0 0.0 0.051864845451712015 0.012579072709043787 4.4125367746927034e-10 9.355311662118668 0.012265148389409397 NRPTSISWDGLDSGK ddPTM_KYSE-520_SHP099_60min_R1 2 NRPTSISWDGLDSGK 15 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 0 ; 160.93 5.9627e-08 2162200000.0 3204400.0 2956600.0 2076530.0 2154800.0 3236500.0 3072900.0 2337200.0 2759800.0 2585000.0 2698600.0 False True 3026645.5441869674 2814560.498052924 2210386.4463654733 2359591.544135758 3491194.136834012 3053720.891265622 2573466.9848738667 2750226.897942165 2115629.1625470496 2674692.5034790314 1.1315863562821307 1.0522931119715493 0.8264076874221523 0.8821917065481679 1.305269346772737 1.141709144992772 0.9621543341997263 1.0282404030986307 0.79098033130732 1.0 21.350941610667657 -6.969116787956965 22.722617503596442 0.9448056086312248 1.0495167074311436 0.13388724448649225 0.13859916533163813 182.70895153557748 134428.38359100424 0.06326353541201221 0.04265119238928787 1.073700640157432e-07 6.969116787956965 0.1047110987999188 NRS(ph)AEEGELAESK ddPTM_KYSE-520_SHP099_60min_R1 10 NRSAEEGELAESK 13 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(0.941)AEEGELAES(0.059)K;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK;NRS(1)AEEGELAESK 246.03 8.043200000000001e-25 12883180000.0 14682870.0 13440900.0 12733990.0 12209590.0 12901060.0 13245700.0 13487980.0 14844600.0 19250350.0 14075340.0 True False 13868381.931524303 12795178.988797799 13554843.3705044 13369985.762652919 13916300.02500966 13163028.673057059 14851476.64839937 14793107.54735568 15754971.701832753 13950643.438048815 0.994103389790599 0.9171748274993814 0.9716285439232921 0.958377713689376 0.9975382201407652 0.9435427642825688 1.064572878975147 1.0603889070097754 1.1293365622737397 1.0 23.733828328450546 -6.769545542725525 24.58637549791532 1.0686070396365543 0.9632643480107832 0.6432735339404537 0.03634774168073597 86.30124844352719 261752.29866636364 0.014274622599017623 0.00981674549520061 1.7000216698206285e-07 6.769545542725525 -0.10534269162577115 NRSAEEGELAES(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 NRSAEEGELAESK 13 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 NRSAEEGELAES(1)K;NRS(0.007)AEEGELAES(0.993)K 272.09 3.2220999999999996e-22 6316800000.0 5922200.0 5454100.0 4994300.0 5122600.0 5433500.0 5190300.0 5309800.0 5971600.0 7424600.0 5864400.0 True False 5593683.760386992 5192076.849228991 5316240.569162537 5609450.363834152 5861085.537613974 5157905.412455978 5846566.402654142 5950885.91338192 6076479.798934949 5812445.978434162 0.9623631395700123 0.8932688352705698 0.9146305340105201 0.965075698707019 1.008368173977062 0.8873898237666694 1.0058702350691218 1.023817844580648 1.045425595606467 1.0 22.47071397191482 -6.922789232973631 7.329647056916096 1.0238090880301252 0.939884073776325 0.5572779961434264 0.03527156343284204 0.17602925729157132 14.048467140895285 0.015380220273326627 0.010332671834108539 1.194567698282474e-07 6.922789232973631 -0.08392501425380017 NRT(ph)LPDLSEVGPFHGQPLGPGLRPGEDPK ddPTM_KYSE-520_SHP099_60min_R1 1 NRTLPDLSEVGPFHGQPLGPGLRPGEDPK 29 2 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 NRT(1)LPDLSEVGPFHGQPLGPGLRPGEDPK 169.13 2.8527e-10 301650000.0 98546.0 92560.0 78235.0 68197.0 87695.0 89816.0 54441.0 83930.0 103660.0 71565.0 True False 93079.45693341926 88113.27866460755 83278.1532804258 74678.42237582422 94596.09758370418 89255.42502844648 59944.42757295833 83638.86641940918 84837.95705594873 70930.9897767275 1.312253744469229 1.242239519594545 1.1740729058281014 1.0528320923039798 1.3336356630785549 1.2583417390536857 0.845109137228283 1.1791583154652545 1.1960633472477515 1.0 16.114128458765087 NRT(ph)PSDVK ddPTM_KYSE-520_SHP099_60min_R1 5 NRTPSDVK 8 1 P39687;H0YN26;H7BZ09;O95626 P39687 ANP32A;ANP32D Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member D 1 NRT(0.934)PS(0.066)DVK;NRT(0.773)PS(0.227)DVK;NRT(0.914)PS(0.086)DVK;NRT(0.5)PS(0.5)DVK;NRT(0.876)PS(0.124)DVK 135.56 0.0023250999999999996 5996970000.0 8435910.0 7206030.0 6932600.0 6635550.0 6839560.0 6913730.0 7050890.0 6997630.0 8582120.0 6947500.0 True False 7967953.255730333 6859841.5023284545 7379486.4885521885 7266190.676949153 7377794.460226919 6870578.8465520805 7763662.771255046 6973356.854789118 7023823.345639569 6885950.555073203 1.1571319300078284 0.9962083589569907 1.0716728837263252 1.0552196997110022 1.0714271619030653 0.9977676707960389 1.1274642054371407 1.012693425405374 1.02002233235102 1.0 22.715224390922273 -1.0000001568605108 0.057967753189390576 0.9186627865186304 1.318873026902698 0.2131740553187368 0.047633708903648035 659.6036111431607 2.8693893610203207 4.140978700699241 22.517666037938596 0.09999996388153913 1.0000001568605108 0.4002102403840676 NRTPS(ph)DVK ddPTM_KYSE-520_SHP099_60min_R1 4 NRTPSDVK 8 1 P39687;H0YN26;H7BZ09;O95626 P39687 ANP32A;ANP32D Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member D 1 NRT(0.438)PS(0.562)DVK;NRT(0.072)PS(0.928)DVK;NRT(0.018)PS(0.982)DVK;NRT(0.058)PS(0.942)DVK 102.51 0.0079856 4077900000.0 2314560.0 2079780.0 1984000.0 2050020.0 2261040.0 2485960.0 2491960.0 2655890.0 3271000.0 2470780.0 True False 2186166.7428390305 1979864.2469865736 2111891.814512238 2244853.284439013 2438970.984442199 2470444.201519961 2743871.6359859174 2646677.337479383 2677068.85519977 2448890.8114377554 0.8927171161034826 0.8084738763114497 0.8623870875126263 0.9166816560192199 0.9959492571292992 1.0088012866811125 1.1204548700866648 1.0807657593870044 1.09317607902169 1.0 21.22369701929425 -5.846670967715609 1.2254205155647144 1.0770571378524127 0.8449023339451172 0.8538171475986247 0.03804474137220895 0.14916902394790277 0.47271033385701594 0.015592322111386758 0.020704466376425312 1.4234067870410434e-06 5.846670967715609 -0.2321548039072956 NRTPSDVK ddPTM_KYSE-520_SHP099_60min_R1 3 NRTPSDVK 8 1 P39687;H0YN26;H7BZ09;O95626 P39687 ANP32A;ANP32D Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member D 0 ;; 117.31 0.0010845999999999998 902700000.0 1267160.0 1352580.0 924830.0 822490.0 1153700.0 1199580.0 752920.0 977980.0 1224250.0 974530.0 False True 1196868.108779167 1287600.0265360277 984446.0215803195 900659.202309364 1244489.6263449397 1192092.9762583931 829032.50139108 974587.6156422476 1001957.0608310347 965896.4223728671 1.2391267645850514 1.3330622173471232 1.01920454282446 0.9324594039770452 1.2884296882347563 1.234183033135003 0.8583037292491873 1.0089980592826189 1.0373338565325454 1.0 19.881508964801363 -1.0000000008878336 0.27825137816665424 0.99432561135467 3.190954206126594 0.27355930983851573 0.1326354315781516 74.02324600638678 1.0420785555450631 0.16020378824352963 78.89746749719433 0.09999999979556876 1.0000000008878336 2.196628594771924 NRTS(ph)VDFK ddPTM_KYSE-520_SHP099_60min_R1 2 NRTSVDFK 8 1 P49902-2;P49902 P49902-2 NT5C2 Cytosolic purine 5-nucleotidase 1 NRT(0.002)S(0.998)VDFK;NRT(0.355)S(0.645)VDFK 145.23 0.00034045 2287280000.0 3223100.0 2924590.0 2634070.0 2637550.0 3027600.0 3297100.0 3232800.0 3320200.0 3761600.0 3375900.0 True False 3044308.217909442 2784088.3065009103 2803866.366861011 2888221.958991674 3265854.895312423 3276521.5759028564 3559602.9730875543 3308683.001140507 3078588.2622193373 3345992.152410453 0.9098372259230559 0.8320665977937972 0.8379775681306082 0.8631885035686645 0.976049777331277 0.9792376750024503 1.0638408014565175 0.9888495998883116 0.9200823319330028 1.0 21.67400263105077 -5.782490839982568 4.044540010825884 0.9926654052431124 0.855510606722461 0.7299729332650287 0.03795280453021787 0.11118559138117595 4.024771623473712 0.01235743080093591 0.014936505951909332 1.6500958043112007e-06 5.782490839982568 -0.13715479852065138 NRVPS(ph)AGDVEK ddPTM_KYSE-520_SHP099_60min_R1 8 NRVPSAGDVEK 11 1 Q15785 Q15785 TOMM34 Mitochondrial import receptor subunit TOM34 1 NRVPS(1)AGDVEK;NRVPS(1)AGDVEK;NRVPS(1)AGDVEK;NRVPS(1)AGDVEK;NRVPS(1)AGDVEK;NRVPS(1)AGDVEK;NRVPS(1)AGDVEK;NRVPS(1)AGDVEK 166.3 1.0583e-05 14164190000.0 12368450.0 11192000.0 10952990.0 10867350.0 11032880.0 11242530.0 10488510.0 11152010.0 13196100.0 11636710.0 True False 11682347.422606213 10654319.520465512 11659037.260803632 11900179.676612077 11901104.887499839 11172361.200065238 11548790.948793165 11113326.28020869 10800020.88661012 11533617.802623386 1.0128953137279266 0.9237621449569906 1.0108742512823443 1.0317820375411881 1.0318622561598032 0.9686779457460454 1.001315558260161 0.9635594373242455 0.9363948997992283 1.0 23.45934178493962 -9.293073687586105 7.623235403804245 0.9999999996191924 0.9875060343230205 0.011666283114862508 0.03593438302213817 0.0 0.0 0.03625238218530196 0.00879249423787742 5.092444592326125e-10 9.293073687586105 -0.01249396529617186 NRWDET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 NRWDETPK 8 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 NRWDET(1)PK 68.786 0.056981 0.0 394510.0 379070.0 334750.0 369810.0 372380.0 375670.0 340780.0 365680.0 427100.0 399730.0 True False 372625.7438638127 360858.9082043297 356328.5206189371 404956.63121256884 401684.18744762824 373325.3041822889 375229.368092297 364411.54143035354 349549.4063148342 396188.7031852343 0.9405259182506147 0.9108258395636626 0.899390915879646 1.0221306866067688 1.0138708757170811 0.9422916433024698 0.9470975953518342 0.9197928625945107 0.8822800940677142 1.0 18.595828218644538 -4.570998690087779 0.002639858867915575 1.8840543305473918 4.773384032046727e-06 0.02986108349313321 0.04565650247967051 613222.157828818 279.04435433430746 97855.40691662629 101315.66037243926 2.6853525451646205e-05 4.570998690087779 -1.8840495571633598 NRWDETPKT(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 1 NRWDETPKTER 11 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 NRWDET(0.166)PKT(0.834)ER 76.196 0.036474 546950000.0 428590.0 404940.0 400750.0 362480.0 402070.0 393070.0 360190.0 408050.0 563030.0 378710.0 True False 404815.2583270168 385486.0745726683 426582.9862226714 396929.99021641404 433710.62153463694 390616.70432808663 396601.52031564136 406634.5697895856 460797.9448312828 375354.92403192143 1.0784866066991836 1.0269908555665712 1.1364789933763952 1.057479107914028 1.1554680484163644 1.0406595979406075 1.0566040164213033 1.0833335165066438 1.2276326093755865 1.0 18.51789588331578 -4.748155974862339 24.999176205233034 1.0952325744691094 1.0527387444952119 0.06687417210469282 0.06268316523122394 664.3416021290834 1250260.186673145 0.01533454731203079 0.040052050418845575 1.7858460812716904e-05 4.748155974862339 -0.0424938299738975 NS(ph)DMHLLDLESMGK ddPTM_KYSE-520_SHP099_60min_R1 7 NSDMHLLDLESMGK 14 0 Q9Y3P9;Q9Y3P9-2;Q9Y3P9-3 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 NS(1)DMHLLDLESMGK;NS(1)DMHLLDLESMGK;NS(1)DMHLLDLESMGK;NS(1)DMHLLDLESMGK;NS(1)DMHLLDLESMGK;NS(1)DMHLLDLESMGK;NS(1)DMHLLDLESMGK 275.23 2.3825e-25 5371730000.0 8382540.0 8734880.0 6917820.0 8849380.0 8953100.0 9222320.0 8362550.0 8787780.0 9090800.0 9381540.0 True False 7917543.796020788 8315243.253477819 7363753.746103358 9690422.414536884 9657658.03382932 9164760.0800341 9207918.164623033 8757297.24226327 7440139.880418861 9298426.854327664 0.8514928299227104 0.8942634473279475 0.791935438269983 1.0421571913561678 1.0386335436229692 0.9856247969266594 0.9902662363082949 0.9418041760674236 0.8001503907035715 1.0 23.1485552251753 -5.258489349645035 24.97896621634941 0.9730099064213025 0.8507338600501632 0.4144406598459627 0.06817628966654316 276.2628925577398 2339209.137037593 0.01980814620755118 0.032482374528191645 5.51455725756912e-06 5.258489349645035 -0.12227604637113931 NS(ph)EEEEEEK ddPTM_KYSE-520_SHP099_60min_R1 2 NSEEEEEEK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 NS(1)EEEEEEK;NS(1)EEEEEEK 198.14 1.6327000000000002e-10 3246000000.0 6237500.0 4087500.0 3775100.0 6328500.0 5841100.0 6167600.0 8539900.0 6170900.0 5185700.0 6248600.0 True False 5891493.440852022 3891130.364537419 4018448.9863735647 6929958.737267102 6300761.338687213 6129105.720644937 9403196.433392242 6149494.588198881 4244107.600858893 6193242.26533724 0.9512777295708152 0.6282864770712365 0.6488441456366553 1.1189548931507438 1.0173607084534289 0.989644108538872 1.5182994674729087 0.9929362238284768 0.6852804103292719 1.0 22.562263451382265 -5.264127150365517 24.932400641483728 1.061902836747377 0.7313511469204219 0.3051040131482511 0.20856375868106844 266.9053940735515 2475884.9517140538 0.060267855950651525 0.09411064066327908 5.443432596650418e-06 5.264127150365517 -0.33055168982695515 NS(ph)EEEEEEKKK ddPTM_KYSE-520_SHP099_60min_R1 15 NSEEEEEEKKK 11 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK;NS(1)EEEEEEKKK 179.17 2.9301e-06 58316770000.0 43022640.0 36135160.0 34004810.0 38200240.0 37455480.0 37809990.0 40224510.0 42551150.0 42977900.0 36764080.0 True False 40636088.39569346 34399172.67361903 36196814.462219715 41830779.324279025 40403013.183470875 37574003.8275063 44290796.02418647 42403549.99216303 35174196.74469279 36438378.853221394 1.1152002277428694 0.9440368577368232 0.9933706054274606 1.147986838074738 1.1088038067286021 1.0311656283848234 1.215498532538883 1.163705722556158 0.9653063020827326 1.0 25.11895543914611 -5.249046355255018 24.559863775840963 1.100690591327584 1.0101859860605416 0.12997235934775153 0.08272980712941592 1006.5194375703186 1994662.477710247 0.02215794763394231 0.038000508683253276 5.635774980896167e-06 5.249046355255018 -0.0905046052670424 NS(ph)EGWEQNGLYEFFR ddPTM_KYSE-520_SHP099_60min_R1 4 NSEGWEQNGLYEFFR 15 0 J3QK89;Q8IWX8 J3QK89 CHERP Calcium homeostasis endoplasmic reticulum protein 1 NS(1)EGWEQNGLYEFFR;NS(1)EGWEQNGLYEFFR;NS(1)EGWEQNGLYEFFR;NS(1)EGWEQNGLYEFFR 141.6 1.0868e-05 198875000.0 139874.0 155626.0 144369.0 133711.0 132562.0 139237.0 117868.0 121207.0 163168.0 153796.0 True False 132114.9103880938 148149.49336061173 153675.25673856732 146418.85323832207 142993.87522539502 138367.97023565738 129783.24772082533 120786.56120692648 133540.8043305521 152433.4870914775 0.8667052949383082 0.9718959802559992 1.0081463047968233 0.9605425686447365 0.9380738967126191 0.9077268576334595 0.8514090322091796 0.7923886247805952 0.8760594989893027 1.0 17.217820348093422 -6.418939616516465 2.404728112946814 0.8634509624592017 0.9555643281445971 0.2098248059870944 0.05941221949303801 0.3576874464495075 4.063354505679926 0.02387622712877308 0.019922079768973956 3.811188097487572e-07 6.418939616516465 0.09211336568539541 NS(ph)EKFEKPENEIEAQLICEPPINGSSTPNPK ddPTM_KYSE-520_SHP099_60min_R1 1 NSEKFEKPENEIEAQLICEPPINGSSTPNPK 31 2 Q8NHV4-2;Q8NHV4;Q8NHV4-3 Q8NHV4-2 NEDD1 Protein NEDD1 1 NS(1)EKFEKPENEIEAQLICEPPINGSSTPNPK 76.164 0.0093304 532130000.0 51738.0 37805.0 43779.0 46334.0 43677.0 59640.0 28224.0 55619.0 53561.0 52424.0 True False 48867.990002854014 35988.791053538094 46601.06438887668 50737.569429174946 47114.1314118644 59267.764637665285 31077.15735969538 55426.07067057215 43835.672562933345 51959.56414525486 0.9405003834566773 0.6926307340248297 0.8968717339237431 0.9764818135759611 0.9067460858631363 1.1406516896866203 0.5981027337492295 1.066715465811579 0.8436497357904913 1.0 15.665101708562405 -4.983436508060673 24.859308003221344 0.930100476509458 0.8111119190309525 0.08797224461519593 0.14800454916771846 510.24799016841126 765794.8978893821 0.03647937822228927 0.07590766553799588 1.0388754703366012e-05 4.983436508060673 -0.11898855747850556 NS(ph)FTPLSSSNTIR ddPTM_KYSE-520_SHP099_60min_R1 8 NSFTPLSSSNTIR 13 0 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 NS(1)FTPLSSSNTIR;NS(0.998)FT(0.002)PLSSSNTIR;NS(0.963)FT(0.037)PLSSSNTIR;NS(0.97)FT(0.03)PLSSSNTIR;NS(0.755)FT(0.245)PLSSSNTIR;NS(0.997)FT(0.003)PLSSSNTIR;NS(0.999)FT(0.001)PLSSSNTIR;NS(1)FTPLSSSNTIR 241.39 6.906699999999999e-16 12440350000.0 5692100.0 5395010.0 4970400.0 5414310.0 5505390.0 5547010.0 5873680.0 5869190.0 6564940.0 5452120.0 True False 5376347.866079966 5135825.621524899 5290799.93692118 5928884.39452834 5938632.871615816 5512389.0530311195 6467448.895992614 5848831.149769243 5372912.384669885 5403818.458485175 0.9949164479494913 0.9504067653236077 0.9790854333038278 1.097165724584751 1.0989697224729793 1.0200914585454781 1.196829417138784 1.082351525074885 0.9942806972416401 1.0 22.36554777739959 -5.249955494802406 19.084656717714687 1.0778044608181456 0.972362839514221 0.3642119511076535 0.05692707230017871 30.91795977179874 51376.69199702517 0.01543056655047803 0.02621398146150296 5.623989551977088e-06 5.249955494802406 -0.10544162130392465 NS(ph)GSCLGGDEIFLLCDK ddPTM_KYSE-520_SHP099_60min_R1 2 NSGSCLGGDEIFLLCDK 17 0 E9PKV4;A0A087WVP0;Q2TAM5;E9PKH5;A0A087X0W8;Q04206-2;Q04206-3;Q04206-4;Q04206 E9PKV4 RELA Transcription factor p65 1 NS(0.998)GS(0.002)CLGGDEIFLLCDK;NS(0.97)GS(0.03)CLGGDEIFLLCDK 165.06 2.5783999999999997e-06 34113000.0 84254.0 76589.0 83340.0 92338.0 88597.0 82773.0 83060.0 99040.0 106273.0 83278.0 True False 79580.26266381495 72909.54947756733 88712.2297487146 101113.77575756804 95569.07985202633 82256.38300391453 91456.51538748221 98696.45335610968 86976.5021243182 82540.22170930351 0.9641391919697869 0.8833214639808671 1.0747757627929342 1.2250242810550993 1.1578485963923002 0.9965612073785235 1.1080236216178434 1.1957376817293563 1.0537468924016065 1.0 16.332809693088038 -4.858169434587471 5.3272849521638435 1.113688873285222 0.9250104012891966 0.4784974174068095 0.07416555620813273 0.15458374047715395 6.790615428771309 0.019659016546915056 0.042827093787928594 1.3862149088664124e-05 4.858169434587471 -0.18867847199602528 NS(ph)GVNYLILDDDDRERPWEPAAAQMEK ddPTM_KYSE-520_SHP099_60min_R1 1 NSGVNYLILDDDDRERPWEPAAAQMEK 27 2 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 NS(1)GVNYLILDDDDRERPWEPAAAQMEK 169.03 2.1656999999999998e-10 1029100000.0 160940.0 225050.0 220480.0 202540.0 227900.0 188220.0 218910.0 204420.0 285010.0 268720.0 True False 152012.33737406408 214238.26019306286 234692.49358047283 221789.34070412847 245834.43342637745 187045.24916333583 241039.55915571563 203710.9147319866 233259.36851742168 266339.3498609962 0.5707468215019675 0.8043808033055381 0.881178442851047 0.8327321547487497 0.9230120654521371 0.7022816916124323 0.9050091895227474 0.7648547420360691 0.8757976192371157 1.0 18.022906067294123 -1.0000000000010285 0.04883814383790421 1.2780053679778383 1.1269224765852739e-12 0.3646703075202913 0.09301095429865278 676.4227254631078 2.501994962464976 15.703047684095464 65.77886732487264 0.09999999999976318 1.0000000000010285 -1.2780053679767114 NS(ph)IEVAGLSHGLEGLR ddPTM_KYSE-520_SHP099_60min_R1 2 NSIEVAGLSHGLEGLR 16 0 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 NS(1)IEVAGLSHGLEGLR;NS(1)IEVAGLSHGLEGLR 220.52 3.2875e-18 298510000.0 194020.0 184695.0 177115.0 168459.0 180972.0 181783.0 168911.0 197529.0 225720.0 194567.0 True False 183257.323830719 175821.97496715287 188532.11629401954 184469.29271095467 195213.46681017298 180648.42486802014 185986.1722924993 196843.818002615 184734.937938151 192843.28775083562 0.9502914307678563 0.9117350000500134 0.9776441715597259 0.9565761653540121 1.0122907003245027 0.9367628346049984 0.9644420319819682 1.0207449805406155 0.9579536840133059 1.0 17.557069405743853 -1.000000000001451 0.2208312447211788 0.9956415542276345 0.647149896919125 0.26515448338852765 0.027847195432463088 64.97023632805708 0.8317701345615184 0.04256275178753189 8.081618993995537 0.09999999999966588 1.000000000001451 -0.3484916573085095 NS(ph)IQFTDGYEVK ddPTM_KYSE-520_SHP099_60min_R1 2 NSIQFTDGYEVK 12 0 B4DG22;B1AXG1;B7ZB17;P51812;A0A2R8Y603 B4DG22 RPS6KA3 Ribosomal protein S6 kinase alpha-3 1 NS(1)IQFTDGYEVK;NS(1)IQFTDGYEVK 165.34 2.9849e-06 845050000.0 1422710.0 1157970.0 1105110.0 1171440.0 1138890.0 1115100.0 1133830.0 1252030.0 1398440.0 1268310.0 True False 1343789.4401979293 1102339.3830515938 1176347.158838518 1282773.3053937203 1228514.163602315 1108140.2472746568 1248448.6015144342 1247687.0001559998 1144518.5478035961 1257073.7601302497 1.068982173375964 0.8769090709023921 0.9357821284223072 1.0204439437673154 0.9772808904029819 0.8815236483496709 0.9931387012525648 0.9925328486903765 0.9104625234441364 1.0 20.261637873221105 -10.332050371403133 4.62831331203106 1.0000321934040608 0.9602582064002765 0.036271174227570646 0.05837865421425042 1.8711125378756084e-05 2.700335166567563e-06 0.05453730587744777 0.013216534510975653 4.655320959112161e-11 10.332050371403133 -0.03977398700378432 NS(ph)ISPGR ddPTM_KYSE-520_SHP099_60min_R1 1 NSISPGR 7 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 NS(0.5)IS(0.5)PGR 64.711 0.049785 256150000.0 931860.0 755390.0 758150.0 756760.0 835090.0 858310.0 780880.0 736630.0 1006900.0 789600.0 True False 880167.8681831437 719099.930536494 807021.5620828903 828682.2428718098 900806.8319878625 852952.9689160702 859818.9710543834 734074.8024607344 824072.3418834147 782604.7582995045 1.1246646009355101 0.9188545340549704 1.03119940624491 1.0588770820566251 1.1510367429214143 1.0898898324735757 1.0986631015669457 0.9379891888924631 1.0529866233806369 1.0 19.577924356403386 -7.248421996033507 24.964340543835956 0.9966159240329414 1.06420821064333 0.1986214751824289 0.06474005991791466 1355.3994276492613 2599350.128265132 0.032351922188770824 0.018511672879321792 5.6438830245989034e-08 7.248421996033507 0.06759228661038852 NS(ph)KITEDFR ddPTM_KYSE-520_SHP099_60min_R1 4 NSKITEDFR 9 1 O95864-3;O95864-4;O95864-2;O95864 O95864-3 FADS2 Fatty acid desaturase 2 1 NS(1)KITEDFR;NS(0.999)KIT(0.001)EDFR;NS(1)KITEDFR;NS(0.999)KIT(0.001)EDFR 51.092 0.045802999999999996 871000000.0 810310.0 759740.0 782910.0 514495.0 742020.0 698900.0 569030.0 595870.0 983820.0 641190.0 True False 765360.4889870626 723240.9500070111 833377.6313002896 563392.4501114378 800412.7524837247 694537.9058562086 626553.1055976286 593803.0660471033 805183.088083961 635509.5554382709 1.2043256980758403 1.1380488992148 1.3113534236720668 0.8865208167057402 1.2594818530017704 1.092883497836991 0.985906663772403 0.9343731513802254 1.2669881690900415 1.0 19.277554292003423 -5.241024721761561 24.97552439298008 1.064629463164776 1.2099232782478349 0.2502614086212599 0.12420297906195593 1238.7015613927344 1515439.474492971 0.03287215384422493 0.05684294140279468 5.740837821551502e-06 5.241024721761561 0.14529381508305894 NS(ph)KSPEEHLEEMMK ddPTM_KYSE-520_SHP099_60min_R1 2 NSKSPEEHLEEMMK 14 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 NS(0.893)KS(0.107)PEEHLEEMMK;NS(0.616)KS(0.384)PEEHLEEMMK 153.36 1.1331e-06 1005980000.0 1104010.0 1005350.0 1028720.0 1014980.0 875740.0 943010.0 943750.0 1110940.0 1198080.0 1040240.0 True False 1042768.3645106268 957051.4769388852 1095032.9372101976 1111443.3940351368 944655.7557210004 937124.324798202 1039153.460112403 1107086.408435344 980538.8731390228 1031024.282894474 1.0113906935180834 0.9282530904627005 1.062082586586639 1.0779992406336891 0.9162303656602494 0.9089255610618022 1.0078845642656518 1.0737733599516541 0.9510337335472647 1.0 19.97564688107858 -6.980382043959964 24.9899006614207 1.0156079746745523 0.9840008429144506 0.0321713046384946 0.0606764059219721 842.5251956448301 1073229.0156097466 0.027026032343259936 0.018218850407385318 1.0462078059139891e-07 6.980382043959964 -0.03160713176010177 NS(ph)LESISSIDR ddPTM_KYSE-520_SHP099_60min_R1 3 NSLESISSIDR 11 0 A0A0G2JNZ2;A0A669KB89;Q14160;A0A0G2JMS7;A0A0G2JPP5;Q14160-2;Q14160-3;H0YCG0 A0A0G2JNZ2 SCRIB Protein scribble homolog 1 NS(0.999)LESISSIDR;NS(0.993)LES(0.007)IS(0.001)SIDR;NS(1)LESISSIDR 241.83 2.8367e-14 406815000.0 1085370.0 1034890.0 975966.0 1076030.0 1151150.0 1240380.0 1068520.0 1261530.0 1520500.0 1118180.0 True False 1025162.3624685471 985172.3309984402 1038878.3299608114 1178295.5676797843 1241738.9558524569 1232638.3283244008 1176536.4293502592 1257154.0468733143 1244415.5286857984 1108273.7951308773 0.9250082127471799 0.8889250430053705 0.9373841865837215 1.0631809331381312 1.1204261630185153 1.1122146293992607 1.061593655393901 1.1343352629977645 1.1228412456859038 1.0 20.079882907463517 -5.270819470918485 2.89876323590105 1.097996273489758 0.9072649258712745 0.8121360318771876 0.03791219313816069 0.09779780564792245 1.6549721529568702 0.010519916080879937 0.018441682225100342 5.3601942567910045e-06 5.270819470918485 -0.19073134761848343 NS(ph)LGGDVLFVGK ddPTM_KYSE-520_SHP099_60min_R1 4 NSLGGDVLFVGK 12 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 NS(1)LGGDVLFVGK;NS(1)LGGDVLFVGK;NS(1)LGGDVLFVGK;NS(1)LGGDVLFVGK 174.52 1.5084e-06 1049730000.0 2183600.0 1919600.0 1898730.0 1735330.0 1873410.0 1962130.0 1943740.0 1881870.0 2077340.0 2072410.0 True False 2062471.3551013162 1827379.5346216555 2021125.1738754155 1900255.2414540113 2020836.7087551986 1949883.6188548314 2140232.2082743137 1875342.2322017585 1700147.4214798796 2054050.0597105832 1.004099849149694 0.8896470297706056 0.9839707480937407 0.9251260613004526 0.9838303108542231 0.949287292019344 1.0419571802334133 0.9129973358419489 0.8277049594981299 1.0 20.970039911650264 NS(ph)LIELPDDYSCLLNQASHFR ddPTM_KYSE-520_SHP099_60min_R1 4 NSLIELPDDYSCLLNQASHFR 21 0 Q8IWV7 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 1 NS(1)LIELPDDYSCLLNQASHFR;NS(1)LIELPDDYSCLLNQASHFR;NS(1)LIELPDDYSCLLNQASHFR;NS(1)LIELPDDYSCLLNQASHFR 228.55 8.0958e-20 348112000.0 375207.0 400001.0 350347.0 367310.0 381340.0 386082.0 358912.0 344683.0 450206.0 353340.0 True False 354393.51975338865 380784.3515462579 372930.9281950193 402219.0319642218 411349.2884722024 383672.3190281537 395194.32760356326 343487.3751226172 368459.9391696933 350209.6824943601 1.011946663579457 1.0873038941531556 1.0648789763287745 1.1485091705615516 1.1745799988806047 1.0955502894593228 1.128450603617813 0.9808049071520141 1.0521123703529445 1.0 18.41785944596811 -7.258740168689703 24.996727065503727 1.0123439774347003 1.104018505630895 0.45453395064554725 0.04543578057085658 228.13337996898542 2112708.549534594 0.023762127995709422 0.012928341978427972 5.511373342716287e-08 7.258740168689703 0.09167452819619482 NS(ph)LPQIPMLNLEAR ddPTM_KYSE-520_SHP099_60min_R1 1 NSLPQIPMLNLEAR 14 0 Q14289;Q14289-2;H0YB74 Q14289 PTK2B Protein-tyrosine kinase 2-beta 1 NS(1)LPQIPMLNLEAR 74.816 0.016364 30700000.0 36451.0 31097.0 29650.0 32944.0 27955.0 28734.0 31891.0 32727.0 41522.0 30259.0 True False 34428.99036673299 29603.053442451364 31561.286441677363 36074.987855025225 30154.899457807773 28554.660447663904 35114.85350616656 32613.47767553922 33982.65148444051 29990.928801145757 1.1479801307593276 0.9870669107560425 1.0523610872788844 1.2028633089098273 1.0054673417335362 0.9521099075322075 1.170849150387935 1.0874447367663143 1.1330976679569276 1.0 14.872238581851388 NS(ph)LQHHQDDTK ddPTM_KYSE-520_SHP099_60min_R1 1 NSLQHHQDDTK 11 0 Q6ZU80;H0YJH2 Q6ZU80 CEP128 Centrosomal protein of 128 kDa 1 NS(1)LQHHQDDTK 78.95 0.0079601 259330000.0 146290.0 165680.0 145520.0 134680.0 144370.0 144860.0 118270.0 153660.0 154680.0 146240.0 True False 138175.00207811513 157720.4841092501 154900.45204023217 147479.94670698137 155731.09764706515 143955.8750069113 130225.88580396716 153126.9893245137 126594.01116548468 144944.42737299835 0.9532964087162671 1.0881445183358032 1.0686885646290705 1.0174930446098363 1.0744193513994746 0.9931797835625433 0.8984538982574704 1.0564530979204771 0.8733968836187754 1.0 17.145140342117696 -6.51610867995121 24.33602734811701 0.9594998851031588 1.0424025544550457 0.3094445303744544 0.05877862700532994 263.8751860697987 948548.4776421329 0.02051193011344145 0.016515635308743403 3.047132365072897e-07 6.51610867995121 0.08290266935188695 NS(ph)MDRPK ddPTM_KYSE-520_SHP099_60min_R1 2 NSMDRPK 7 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 NS(1)MDRPK;NS(1)MDRPK 76.143 0.013257 938370000.0 1661910.0 1409460.0 1276740.0 1430470.0 1511910.0 1444480.0 1454570.0 1329100.0 1530740.0 1500060.0 True False 1569720.5393645512 1341747.4259574078 1359040.703256226 1566421.4387135108 1630888.7154088402 1435464.464517351 1601612.1308351797 1324489.6623142723 1252796.2028151923 1486770.635429022 1.055791997742539 0.902457577506724 0.9140890133763381 1.0535730269259083 1.096933633571685 0.9654915360250803 1.0772422407798088 0.8908500280758357 0.8426291002537092 1.0 20.503750668865106 -7.285890743983613 24.682558144108302 0.9000546438772904 1.0049723813465334 0.27401628330684713 0.07233516825719097 899.7987518449606 908300.4727602255 0.040741636115448364 0.019586836084419947 5.177370633416024e-08 7.285890743983613 0.10491773746924304 NS(ph)NPVIAELSQAINSGTLLSKPS(ph)PPLPPKR ddPTM_KYSE-520_SHP099_60min_R1 4 NSNPVIAELSQAINSGTLLSKPSPPLPPKR 30 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 2 NS(0.984)NPVIAELS(0.016)QAINS(0.001)GT(0.003)LLS(0.012)KPS(0.985)PPLPPKR;NS(0.994)NPVIAELS(0.006)QAINS(0.003)GT(0.022)LLS(0.071)KPS(0.905)PPLPPKR;NS(1)NPVIAELSQAINSGTLLS(0.003)KPS(0.997)PPLPPKR;NS(1)NPVIAELSQAINSGTLLS(0.002)KPS(0.998)PPLPPKR 199.1 7.107e-16 630982000.0 262297.0 277587.0 250896.0 259247.0 230515.0 240713.0 192778.0 252459.0 298186.0 191334.0 True False 247746.86253389402 264251.30385341827 267069.1576077934 283885.7569345475 248655.21904906275 239210.62087904647 212265.88157197263 251583.27865337385 244042.93905735182 189638.92961559966 1.3064135250925526 1.3934443966176078 1.4083034435447708 1.496980380083284 1.3112034514911564 1.2614003958149798 1.119315965357103 1.3266436335795404 1.2868820740131244 1.0 17.532895629592115 -6.153872113347626 2.7499110746498396 1.2113850333967275 1.4008204018436505 0.48937906069675075 0.09683738987574514 0.26035475521189083 3.8248493442732987 0.034379936027084355 0.03415212431942593 7.01661886306559e-07 6.153872113347626 0.189435368446923 NS(ph)PAS(ph)PLKELSGK ddPTM_KYSE-520_SHP099_60min_R1 1 NSPASPLKELSGK 13 1 E7EMD6;O43572 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 2 NS(1)PAS(1)PLKELSGK 84.829 0.002356 77886000.0 147450.0 152970.0 132680.0 128280.0 138630.0 130730.0 120950.0 140520.0 186970.0 144970.0 True False 139270.65456571218 145621.09158734896 141232.76509550598 140471.69263121166 149539.39230319782 129914.06557816883 133176.8063582465 140032.56891761473 153020.96113014396 143685.67858495325 0.9692730405512842 1.0134697697185695 0.9829286153386748 0.9776318281307254 1.0407397158568146 0.9041545883875821 0.92686207609415 0.9745756869904147 1.0649701670836407 1.0 17.13255674733774 -7.7384327046539 24.255516110930742 1.0324850420340763 0.9738230612011366 0.26493424859346915 0.03916373303979789 201.30418065296408 212233.0333312858 0.027733197903484934 0.010464755969622602 1.826279715148061e-08 7.7384327046539 -0.05866198083293972 NS(ph)PATLFEVPDTW ddPTM_KYSE-520_SHP099_60min_R1 7 NSPATLFEVPDTW 13 0 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;O95453-4 A0A494C0Q6 PARN Poly(A)-specific ribonuclease PARN 1 NS(0.645)PAT(0.355)LFEVPDTW;NS(1)PATLFEVPDTW;NS(0.5)PAT(0.5)LFEVPDTW;NS(0.5)PAT(0.5)LFEVPDTW;NS(0.5)PAT(0.5)LFEVPDTW;NS(0.5)PAT(0.5)LFEVPDTW;NS(0.5)PAT(0.5)LFEVPDTW 159.83 1.1456e-06 145248600.0 355033.0 350069.0 309403.0 268244.0 307778.0 337644.0 302366.0 319304.0 376474.0 325438.0 True False 335338.6117492606 333251.1597757182 329347.6124423037 293737.8291095004 331998.377582728 335536.6385533172 332932.1060877853 318196.408950114 308115.8117372295 322554.8725069329 1.0396327581194824 1.0331611399500884 1.0210591763273544 0.910660027630452 1.029277204843936 1.0402466902623067 1.0321719944894938 0.9864876834042393 0.9552353351307907 1.0 18.299185084769917 -5.011794535959609 24.89298230988388 0.9954669094299449 1.0340752715312271 0.1886548317884741 0.03665966665409726 1005.0504178306061 2121228.0615539746 0.010479214325397621 0.019595984036214476 9.7320753784604e-06 5.011794535959609 0.03860836210128227 NS(ph)PEDLGLSLTGDSCK ddPTM_KYSE-520_SHP099_60min_R1 12 NSPEDLGLSLTGDSCK 16 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK;NS(1)PEDLGLSLTGDSCK 406.21 4.5854999999999985e-101 28324490000.0 15351080.0 13580520.0 12578570.0 11834650.0 13704850.0 12774160.0 12637800.0 13405490.0 15830830.0 12828430.0 True False 14499524.990780698 12928091.434423888 13389404.748623582 12959411.577782748 14783343.725070184 12694431.729105938 13915352.157042172 13358989.484054882 12956350.334748454 12714780.0905675 1.1403677364060127 1.0167766443726882 1.0530583032699523 1.0192399306533606 1.16268969024775 0.9983996293041154 1.0944233449515435 1.0506661844639602 1.0189991680910129 1.0 23.60000317421507 -7.791218460829919 2.6123370822497107 1.0014757525182687 1.065979016585095 0.18316359612231414 0.050096230900866075 0.4584567429932618 5.932069259555162 0.04427742570148604 0.012452913513891124 1.617266308178001e-08 7.791218460829919 0.06450326406682638 NS(ph)PFKR ddPTM_KYSE-520_SHP099_60min_R1 1 NSPFKR 6 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 NS(1)PFKR 85.73100000000001 0.010985 653150000.0 590160.0 478420.0 497820.0 460180.0 494390.0 473100.0 414910.0 466060.0 520360.0 442730.0 True False 557422.6483452065 455435.98507693986 529910.2737401623 503915.36884183844 533295.6803056902 470147.20741246524 456853.1519313781 464443.34663922136 425875.7412081173 438807.7566387279 1.2703117479396215 1.0378941078106376 1.20761373454125 1.148373886327433 1.2153287453046426 1.071419546030357 1.0411236925957694 1.058421004671527 0.970529200464299 1.0 18.74322950237783 -6.477047828163661 3.3933095797623727 1.0236494593497858 1.1682682446332 0.6029814405345151 0.060703703369278834 0.1804856444803729 4.202363548612504 0.022434425094054952 0.01851395274410928 3.3338969506218927e-07 6.477047828163661 0.1446187852834142 NS(ph)PGSQVASNPR ddPTM_KYSE-520_SHP099_60min_R1 4 NSPGSQVASNPR 12 0 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 NS(0.909)PGS(0.091)QVASNPR;NS(0.993)PGS(0.007)QVASNPR;NS(0.993)PGS(0.007)QVASNPR;NS(0.999)PGS(0.001)QVASNPR 318.82 1.8190999999999997e-39 10093200000.0 4007050.0 3634100.0 3399120.0 3221950.0 3318760.0 3438080.0 3254430.0 3490470.0 3956860.0 3228150.0 True False 3784770.948643858 3459512.381104693 3618232.7139842967 3528163.1592854084 3579927.5308386353 3416621.6674289787 3583419.544576011 3478362.3742518183 3238393.9683233732 3199551.102462699 1.1829068601938297 1.081249297266076 1.1308563601935715 1.1027056753585764 1.118884311015742 1.0678440687505195 1.119975718411826 1.087140746579893 1.0121400986003244 1.0 21.60943807828695 -7.720215488648955 2.8091748621111754 0.9987077242715876 1.1120192796016704 0.6844960180166784 0.02914968007347056 0.1447575522366089 2.1323015020519325 0.02497760894283147 0.00727445857428849 1.904515499171682e-08 7.720215488648955 0.11331155533008275 NS(ph)PGVPTGAK ddPTM_KYSE-520_SHP099_60min_R1 3 NSPGVPTGAK 10 0 R4GND7;B7ZC06;Q08379 R4GND7 GOLGA2 Golgin subfamily A member 2 1 NS(1)PGVPTGAK;NS(1)PGVPTGAK;NS(0.999)PGVPT(0.001)GAK 116.19 0.00058515 3827100000.0 5075300.0 4397200.0 4181000.0 3797600.0 4129710.0 4072300.0 3785320.0 4037500.0 5053500.0 4165650.0 True False 4793762.991640286 4185951.91166824 4450513.949836531 4158522.762209931 4454694.682164309 4046883.2651570104 4167977.0867631114 4023494.854859584 4135911.7883680947 4128745.5818266575 1.1610700869389505 1.0138556199959101 1.077933687516661 1.007212161610137 1.0789462789309103 0.9801725935766115 1.009502039822734 0.9745078196558413 1.001735686154405 1.0 21.977272090006895 -1.0000000000000002 0.4506929235099411 0.9971771158726757 4.117841517985572 0.6106253654269486 0.03436609869898952 60.02208893723693 0.723557642649415 0.020567960813279027 172.4044719107594 0.09999999999999995 1.0000000000000002 3.1206644021128964 NS(ph)PMAQT(ph)PPCHLPNIPGVTSPGTLIEDSK ddPTM_KYSE-520_SHP099_60min_R1 2 NSPMAQTPPCHLPNIPGVTSPGTLIEDSK 29 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 NS(1)PMAQT(1)PPCHLPNIPGVTSPGTLIEDSK;NS(1)PMAQT(1)PPCHLPNIPGVTSPGTLIEDSK 154.33 6.1551e-07 261170000.0 264390.0 304240.0 266070.0 327660.0 367190.0 339820.0 343530.0 350740.0 381370.0 338240.0 True False 249723.75965160184 289623.8537264498 283221.2979270518 358800.707885429 396085.76397468935 337699.0573301716 378257.3649297104 349523.36480333155 312122.8215553455 335243.4567467377 0.7449027106299575 0.8639209741392458 0.8448227466554658 1.0702690855394914 1.1814869343562324 1.0073248277752038 1.1283064809090901 1.042595635408275 0.931033299155906 1.0 18.354849648442308 -5.222976783895452 4.769046216448478 1.060552181577598 0.8177528360363046 0.6933873314697347 0.07117037243895806 0.11398817163855064 6.363947622948178 0.01998244030236889 0.03456657991788771 5.984435852376603e-06 5.222976783895452 -0.24279934554129345 NS(ph)PNNISGISNPPGTPR ddPTM_KYSE-520_SHP099_60min_R1 1 NSPNNISGISNPPGTPR 17 0 Q9NW25;A0A087WVT6;Q9BWW4-2;Q9BWW4-3;Q9BWW4 Q9NW25 SSBP3 Single-stranded DNA-binding protein 3 1 NS(0.995)PNNIS(0.005)GISNPPGTPR 191.53 1.0267000000000002e-09 0.0 66215.0 73154.0 62069.0 58550.0 56790.0 53020.0 51080.0 55326.0 69307.0 56772.0 True False 62541.92195367002 69639.5720336074 66070.06705391138 64114.57439630058 61259.04990910043 52689.082513229594 56243.66489275935 55134.087019185456 56722.59588729151 56269.04424794765 1.1114800826913134 1.2376178228075632 1.1741814338053416 1.1394288858680781 1.088681187460098 0.9363777760478199 0.9995489641679985 0.9798298115077085 1.0080604112866267 1.0 15.780053838405086 -5.938717431627821 2.343517286629945 0.9845534329821527 1.1754627926867458 0.8475363369657459 0.03609718063120136 0.10257908820438533 1.1431352080804194 0.012210380560745767 0.013873389713643845 1.151549386724117e-06 5.938717431627821 0.1909093597045931 NS(ph)PNSGQSSALATLTVEQLSSR ddPTM_KYSE-520_SHP099_60min_R1 1 NSPNSGQSSALATLTVEQLSSR 22 0 Q86VQ1 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 NS(0.999)PNS(0.001)GQSSALATLTVEQLSSR 197.15 7.5157e-14 182370000.0 96906.0 129410.0 95247.0 94772.0 83062.0 109840.0 79622.0 93547.0 128140.0 105180.0 True False 91530.43100267823 123192.94935162971 101386.77402058836 103779.10238575909 89598.50684186842 109154.44781692068 87670.96879583556 93222.50729103386 104873.00614652978 104248.18702880175 0.8780050148727301 1.1817274991803348 0.9725519158676319 0.9955003088647185 0.8594730459639945 1.0470632720621167 0.8409831508303716 0.8942362447538612 1.0059935729870813 1.0 16.66966276854032 -5.31073280411122 2.556564008646419 0.9369620576330563 1.0324556169881625 0.08814154895077408 0.09386579937486728 0.5253111838577971 6.7436476497825595 0.026571061959254162 0.04635695772851738 4.8895309094294615e-06 5.31073280411122 0.09549355935510617 NS(ph)PPFLK ddPTM_KYSE-520_SHP099_60min_R1 8 NSPPFLK 7 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 NS(1)PPFLK;NS(1)PPFLK;NS(1)PPFLK;NS(1)PPFLK;NS(1)PPFLK;NS(1)PPFLK;NS(1)PPFLK;NS(1)PPFLK 103.26 0.0044659 10916985000.0 14640570.0 13323660.0 12558170.0 12554600.0 13475200.0 12910810.0 12859440.0 13512430.0 15534300.0 12141900.0 True False 13828428.396847285 12683571.374378607 13367689.731982443 13747785.409321887 14535621.576599939 12830228.845768198 14159397.691240102 13465558.534154873 12713662.70783547 12034332.212255258 1.1490814906011149 1.0539489147110457 1.110796136936402 1.1423804135406632 1.2078461289108733 1.066135504610919 1.1765835811662875 1.1189286033205992 1.0564493719799766 1.0 23.520652752779473 -7.9341525480682575 2.685020276280333 1.001105870884814 1.1282984638105527 0.4805605944397261 0.04364090201636264 0.2156640462064658 3.358075623606425 0.04195673649163232 0.011407771807755722 1.1637171962357393e-08 7.9341525480682575 0.1271925929257387 NS(ph)PQALR ddPTM_KYSE-520_SHP099_60min_R1 4 NSPQALR 7 0 Q7L7X3-3;Q7L7X3 Q7L7X3-3 TAOK1 Serine/threonine-protein kinase TAO1 1 NS(1)PQALR;NS(1)PQALR;NS(1)PQALR;NS(1)PQALR 111.61 0.0029361 1806210000.0 3555360.0 3349680.0 3193280.0 3662670.0 3638910.0 3062000.0 3218380.0 3922490.0 3997760.0 3574220.0 True False 3358137.0933655566 3188756.3448278173 3399123.938228651 4010769.055578115 3925271.5144343134 3042888.9222087716 3543725.2587619196 3908883.797706048 3271867.5593284746 3542555.191501079 0.9479420677543828 0.9001289104762409 0.9595119213339193 1.1321684035298376 1.1080339761117644 0.8589531447552169 1.0003302890703432 1.1034080166439821 0.9235897205435192 1.0 21.75635889921684 -5.0105188394622875 24.31243962788037 1.0208406315078593 0.9254816847674999 0.18845025150247563 0.08030034953301543 572.9438420604057 1324273.3745957338 0.022187091667422332 0.041991284468800766 9.760704400983092e-06 5.0105188394622875 -0.09535894674035938 NS(ph)PQPLRR ddPTM_KYSE-520_SHP099_60min_R1 3 NSPQPLRR 8 1 Q9UL54-2 Q9UL54-2 TAOK2 Serine/threonine-protein kinase TAO2 1 NS(1)PQPLRR;NS(1)PQPLRR;NS(1)PQPLRR 85.958 0.0033308 3606850000.0 1804460.0 2014040.0 2013530.0 1984270.0 2039540.0 1903610.0 1893070.0 1840800.0 2384190.0 1795990.0 True False 1704363.0066981704 1917282.4952643283 2143325.365561908 2172854.424207471 2200040.1946048005 1891728.8638817244 2084439.9901827706 1834414.6944459502 1951281.1965389012 1780078.9258590785 0.9574648527877117 1.07707723933591 1.204061985356927 1.2206506086008722 1.235922836142249 1.0627219031699748 1.170981780584142 1.0305243592278635 1.096176786429399 1.0 20.76350977872997 -7.64743784832461 1.1031149157733942 1.0131140048014564 1.139267848842107 0.17641718385402372 0.08399429944384355 0.8380600338906958 1.982264612681934 0.08341536031166977 0.028541185085586035 2.2519676717005778e-08 7.64743784832461 0.12615384404065066 NS(ph)PRPS(ph)PKQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 NSPRPSPKQSPR 12 2 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 3 NS(1)PRPS(1)PKQS(1)PR;NS(1)PRPS(1)PKQS(1)PR 84.65299999999999 0.002282 1553600000.0 1019690.0 1090120.0 1085660.0 1265800.0 1021570.0 697170.0 705090.0 788330.0 1185840.0 713830.0 True False 963125.7629983795 1037748.9988965198 1155643.3807174163 1386101.2514233533 1101961.747061802 692818.7034279201 776367.3782152644 785595.4672276061 970521.3485937308 707506.0215513367 1.3612969129033696 1.4667705535863351 1.6334043040134927 1.9591370379916655 1.5575298492096912 0.9792407164377033 1.0973297110785525 1.110372835421307 1.3717499484537032 1.0 19.432382901144983 -6.198918634579869 6.5744751746329655 1.1182739386271552 1.6138111459289177 0.6569646567052063 0.17470530023795253 0.16129093473247216 13.915296254783174 0.06217095343845999 0.06198800959190615 6.325303453443284e-07 6.198918634579869 0.49553720730176254 NS(ph)PRPSPKQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 NSPRPSPKQSPR 12 2 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 2 NS(0.844)PRPS(0.298)PKQS(0.858)PR;NS(0.996)PRPS(0.005)PKQS(0.999)PR 75.23899999999999 0.013122 787130000.0 857120.0 726250.0 687850.0 541220.0 680150.0 550890.0 540230.0 558140.0 896510.0 612110.0 True False 809573.8449736417 691359.8598765263 732189.9115989136 592657.3860762739 733673.9354758698 547451.6911677301 594841.7205367142 556203.9426108559 733726.3831779727 606687.1816143738 1.334417257373715 1.1395656292536813 1.2068656365057546 0.9768747453988279 1.2093117469922285 0.9023623833801465 0.9804751749556678 0.9167886836356361 1.2093981963250846 1.0 19.210593304158163 -3.5692132148048956 0.5446756935113715 1.006956113100089 1.8395473669519167 0.4417390912567114 0.1062953558469238 7.266449180716518 0.9430151398439025 0.05470403121587229 4.512744112835353 0.00026964153151962344 3.5692132148048956 0.8325912538518276 NS(ph)PSAASTSSNDSK ddPTM_KYSE-520_SHP099_60min_R1 2 NSPSAASTSSNDSK 14 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 NS(0.787)PS(0.212)AAS(0.001)TSSNDSK;NS(0.999)PS(0.001)AASTSSNDSK 303.07 1.6064999999999996e-33 808690000.0 925150.0 710930.0 710920.0 865150.0 828170.0 881350.0 1018400.0 997830.0 924510.0 914030.0 True False 873830.0852591976 676775.8556723145 756747.0407122175 947373.5958831668 893342.2673572754 875849.1677298169 1121349.810626196 994368.7606252729 756642.2890005321 905932.4053045806 0.964564331888989 0.7470489538839026 0.8353239560492308 1.0457442413318392 0.9861025636420718 0.9667930660183752 1.237785296187954 1.0976191543683211 0.8352083274316078 1.0 19.78904388434422 -5.259746062238713 24.053025713643517 1.0331690895755352 0.8387860476911931 0.3514386074700828 0.10832233555789589 92.43308704682879 1312959.072004754 0.030548168211885288 0.049544768603044964 5.498622916769698e-06 5.259746062238713 -0.19438304188434208 NS(ph)PVTKT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 6 NSPVTKTPPR 10 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 NS(1)PVT(0.202)KT(0.798)PPR;NS(1)PVT(0.006)KT(0.994)PPR;NS(1)PVT(0.086)KT(0.914)PPR;NS(1)PVT(0.045)KT(0.955)PPR;NS(1)PVT(0.31)KT(0.69)PPR;NS(1)PVT(0.047)KT(0.953)PPR 132.44 0.00027366 7977220000.0 7311330.0 7159520.0 7432670.0 6371060.0 7419460.0 7278270.0 6197590.0 6397960.0 9094860.0 6760820.0 True False 6905755.950124992 6815565.912541385 7911791.800892485 6976563.626870967 8003329.29104726 7232843.617192828 6824102.879849569 6375766.970055085 7443462.686763125 6700924.394638369 1.030567656553552 1.0171083138909527 1.1807015472705484 1.0411345086139379 1.1943619745136937 1.0793799767357568 1.0183823123433178 0.9514757359680922 1.1108113221989022 1.0 22.67592869886022 -6.723750405853761 5.02290776117223 1.0157313206019372 1.0945670120729298 0.21325288768212336 0.06619421940508009 0.2881341352614796 17.08144416409506 0.02634512265964499 0.019518936995561197 1.889076711783682e-07 6.723750405853761 0.07883569147099267 NS(ph)QLGIFSSSEK ddPTM_KYSE-520_SHP099_60min_R1 10 NSQLGIFSSSEK 12 0 O14777 O14777 NDC80 Kinetochore protein NDC80 homolog 1 NS(1)QLGIFSSSEK;NS(1)QLGIFSSSEK;NS(0.999)QLGIFS(0.001)SSEK;NS(0.999)QLGIFS(0.001)SSEK;NS(0.996)QLGIFS(0.003)SSEK;NS(0.873)QLGIFS(0.111)S(0.015)SEK;NS(0.99)QLGIFS(0.01)SSEK;NS(0.984)QLGIFS(0.015)S(0.001)SEK;NS(1)QLGIFSSSEK;NS(1)QLGIFSSSEK 234.09 3.5063e-15 14446500000.0 12574820.0 11655690.0 10343480.0 11838320.0 10732410.0 11881830.0 12186700.0 11603200.0 12363190.0 11118460.0 True False 11877269.667317808 11095733.156852622 11010237.270953149 12963430.373479309 11576989.607940273 11807671.091628935 13418650.56673043 11562951.207407247 10118346.346657673 11019959.094430994 1.0777961665320572 1.006876074745134 0.9991177985875865 1.176359209902191 1.0505474211597372 1.0714804828627735 1.217667910719526 1.0492735143863336 0.9181836574848126 1.0 23.39361553291452 -7.603912258955199 6.143223766322096 0.9626342973358691 1.0844516019772499 0.35958294629496845 0.06656384045762781 0.24044706680408895 14.204361819591702 0.04816444148336536 0.0176383666203854 2.4893601959640822e-08 7.603912258955199 0.12181730464138074 NS(ph)RDGDPLPSSLSCK ddPTM_KYSE-520_SHP099_60min_R1 6 NSRDGDPLPSSLSCK 15 1 P53602;H3BP35 P53602 MVD Diphosphomevalonate decarboxylase 1 NS(1)RDGDPLPSSLSCK;NS(1)RDGDPLPSSLSCK;NS(1)RDGDPLPSSLSCK;NS(0.992)RDGDPLPS(0.005)S(0.002)LS(0.001)CK;NS(1)RDGDPLPSSLSCK;NS(1)RDGDPLPSSLSCK 144.5 5.9097e-06 4331100000.0 3875300.0 3382670.0 3258210.0 2924950.0 3347810.0 3379260.0 3321950.0 3237770.0 4284810.0 3082430.0 True False 3660329.3837809786 3220161.4557088125 3468239.4299203265 3202936.3685817183 3611263.600566746 3358168.7848671507 3657765.1251077126 3226538.931571198 3506796.515270106 3055122.068294252 1.1980959522918928 1.0540205542447298 1.1352212292639188 1.0483824531338595 1.1820357811702764 1.0991929977914425 1.1972566212877809 1.0561080243096972 1.1478417021903269 1.0 21.542798593821374 -10.596705739073489 2.716264625291073 0.9902619428629518 1.121373048075141 0.3094694284287697 0.0555270326637217 15533448.354433084 15348562.648228364 1085185.441554048 0.012617532329121738 2.5310123303949876e-11 10.596705739073489 0.13111110521218916 NS(ph)RPTGRPR ddPTM_KYSE-520_SHP099_60min_R1 1 NSRPTGRPR 9 2 O75494;O75494-4;O75494-3 O75494;O75494-3 SRSF10 Serine/arginine-rich splicing factor 10 1 NS(0.976)RPT(0.024)GRPR 53.034 0.048669 2356300000.0 663440.0 586760.0 471130.0 602780.0 461890.0 532270.0 559630.0 631330.0 598290.0 433380.0 True False 626637.6606651492 558571.1688552847 501499.7936346527 660068.0299675848 498238.1152053955 528947.905494469 616202.861862469 629140.0635835299 489655.61766354914 429540.59036453755 1.4588555184815981 1.3003920499835486 1.1675259681722876 1.5366837145877317 1.1599325567405785 1.2314270580239404 1.434562590090769 1.464681284368489 1.1399519129216493 1.0 18.712434942821936 -7.9726233361730845 5.68413712502443 1.0005000821873504 1.3356613303335911 0.45723956134352584 0.1239017871099678 0.13206831410824393 12.2232321979947 0.11922302667609788 0.030983031349398674 1.0650663503551853e-08 7.9726233361730845 0.3351612481462407 NS(ph)SEASSGDFLDLK ddPTM_KYSE-520_SHP099_60min_R1 9 NSSEASSGDFLDLK 14 0 Q9UK76-3;Q9UK76;J3KSH8;J3KT51;Q9UK76-2 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 NS(0.932)S(0.068)EASSGDFLDLK;NS(0.943)S(0.057)EASSGDFLDLK;NS(0.774)S(0.226)EASSGDFLDLK;NS(0.921)S(0.079)EASSGDFLDLK;NS(0.995)S(0.005)EASSGDFLDLK;NS(0.996)S(0.004)EASSGDFLDLK;NS(0.583)S(0.416)EASSGDFLDLK;NS(0.752)S(0.248)EASSGDFLDLK;NS(0.984)S(0.016)EASSGDFLDLK 319.53 8.140100000000001e-47 15108380000.0 10380350.0 8547340.0 8181930.0 8927050.0 9467710.0 9337190.0 9573680.0 10135990.0 9954910.0 9227670.0 True False 9804531.292785307 8136712.956581092 8709350.29935086 9775474.14798455 10212764.913098961 9278913.133755237 10541481.004512776 10100830.616447842 8147349.28685929 9145920.022818632 1.072011483625865 0.889654942999762 0.9522661774454017 1.0688344227366093 1.116647082810543 1.0145412501535978 1.1525883648897306 1.1044083691139603 0.8908179020297623 1.0 23.124696872769572 -5.262052574005972 24.917035511431475 1.059654053297026 0.9631452725441692 0.15502307050194464 0.08089664582201879 77.81195225566728 3161905.3411683715 0.02207306113397472 0.03509296802128344 5.469497472705801e-06 5.262052574005972 -0.09650878075285685 NS(ph)SEKLPTELSK ddPTM_KYSE-520_SHP099_60min_R1 8 NSSEKLPTELSK 12 1 P38432 P38432 COIL Coilin 1 NS(0.973)S(0.027)EKLPTELSK;NS(0.992)S(0.008)EKLPTELSK;NS(0.977)S(0.023)EKLPTELSK;NS(0.938)S(0.062)EKLPTELSK;NS(0.576)S(0.394)EKLPT(0.03)ELSK;NS(0.922)S(0.078)EKLPTELSK;NS(0.995)S(0.005)EKLPTELSK;NS(0.5)S(0.5)EKLPTELSK 185.33 7.0514e-08 12656010000.0 12484340.0 12091650.0 10865960.0 10399650.0 11131540.0 10820710.0 10426780.0 10563170.0 14150080.0 10375890.0 True False 11791808.7732852 11510748.984063338 11566397.167750701 11388029.609231222 12007528.868201226 10753173.935151417 11480820.677966435 10526528.828732409 11580782.1664889 10283967.686920274 1.1466205585498566 1.119290660423151 1.1247018193631133 1.1073575837577898 1.1675969075119785 1.0456250216371163 1.1163804698227888 1.0235863383857806 1.1261005984312833 1.0 23.293893646435347 -13.999999940628797 0.07377289410180263 0.613926175718009 1.235315101386502 0.5035225400722296 0.03693186276836978 221.2757211733812 1.1658569926202687 14.073020854842817 1.5687079310441527 1.0000001367072565e-14 13.999999940628797 0.621388925668493 NS(ph)SGPQSGWMK ddPTM_KYSE-520_SHP099_60min_R1 2 NSSGPQSGWMK 11 0 F8VXG7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 NS(0.992)S(0.008)GPQSGWMK;NS(0.967)S(0.033)GPQSGWMK 116.63 0.00025656 387250000.0 703390.0 667200.0 571590.0 541490.0 605250.0 617770.0 595580.0 580040.0 708360.0 621440.0 True False 664371.5545267989 635146.7105123834 608435.6059763358 592953.0467950951 652879.7315985748 613914.2682798544 655787.0387006584 578027.9766223537 579739.6803024493 615934.5250730042 1.078639899992704 1.0311919281308384 0.9878251359659056 0.9626884395298588 1.0599823601724414 0.9967200137175127 1.0647025162665311 0.9384568539226509 0.9412358890480041 1.0 19.23241747247882 -7.275440007858761 24.98256579430006 0.9548847736271323 1.0224484145480135 0.3855217540302073 0.037883597181493284 849.2440928663574 1515373.9738197718 0.020709964395627275 0.010036414471359858 5.3034684809737124e-08 7.275440007858761 0.06756364092088119 NS(ph)SNKPAVTTK ddPTM_KYSE-520_SHP099_60min_R1 1 NSSNKPAVTTK 11 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2;S4R349 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 NS(0.908)S(0.091)NKPAVT(0.001)TK 69.878 0.054216999999999994 0.0 340530.0 351820.0 310930.0 265440.0 283790.0 334720.0 302660.0 316530.0 378050.0 392160.0 True False 321640.1220702747 334918.03910741344 330973.04530559026 290667.33779255394 306122.65845577745 332630.88832192065 333255.82647694845 315432.0313086571 309405.64986495674 388685.76749586297 0.8275068164766237 0.8616678744507366 0.8515183034303231 0.7478208931219682 0.7875839149655401 0.8557835561227773 0.8573913797358055 0.8115348121462009 0.7960303045267794 1.0 18.568244755926465 -10.323378240419371 6.158476312497083 1.0000120871690537 0.8224651264383416 0.6981906864339953 0.0351326830326815 6.343549211788548e-06 6.969249817282261e-07 0.0370099414656861 0.008975618426713497 4.749214221007992e-11 10.323378240419371 -0.17754696073071208 NS(ph)TELAPPLPVR ddPTM_KYSE-520_SHP099_60min_R1 4 NSTELAPPLPVR 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.995)T(0.005)ELAPPLPVR;NS(0.827)T(0.173)ELAPPLPVR;NS(0.795)T(0.205)ELAPPLPVR;NS(0.795)T(0.205)ELAPPLPVR 215.96 9.790299999999998e-11 6316170000.0 3076280.0 2805790.0 2505940.0 2664600.0 2803540.0 3025510.0 3072490.0 3075910.0 3121060.0 2895560.0 True False 2905632.615987859 2670995.636823347 2667476.9020457645 2917842.7828587987 3024162.6480394327 3006626.669834046 3383087.273812723 3065240.3861327926 2554354.1795199625 2869907.5911115934 1.0124481446674136 0.9306904672107569 0.9294643877409927 1.0167026952002447 1.053749137221555 1.0476388435453066 1.1788140093048645 1.0680623988124793 0.8900475358269607 1.0 21.452572853266467 -5.463272638061162 3.931250446551198 1.0498563516386659 0.9554278619365534 0.20517871342339655 0.07044720806580197 0.330819952086917 10.187379520284969 0.021457739199011165 0.03174349794291979 3.4413382524273428e-06 5.463272638061162 -0.09442848970211248 NS(ph)TELAPPLPVRR ddPTM_KYSE-520_SHP099_60min_R1 2 NSTELAPPLPVRR 13 1 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.931)T(0.069)ELAPPLPVRR;NS(0.933)T(0.067)ELAPPLPVRR 101.78 0.00077561 1104770000.0 405730.0 416690.0 431250.0 353100.0 419470.0 369920.0 275540.0 309410.0 501650.0 300730.0 True False 383223.3480972967 396671.5869355587 459049.06502439704 386658.5178366137 452479.9025421791 367611.1920651429 303394.2722112547 308336.72892683727 410563.00556740013 298065.7661643993 1.2857006459639129 1.3308190069596018 1.5400932181228986 1.297225517751511 1.5180539126140777 1.2333224200674746 1.0178769474784852 1.0344587132383831 1.3774242203344902 1.0 18.185271161000422 -6.5033774476471145 6.037985266374114 1.1113581115412896 1.3927595216555209 0.5349145141845828 0.12640892358005565 0.13400957735578647 18.009960569045077 0.045530939117667535 0.038070342838370096 3.137780446783947e-07 6.5033774476471145 0.28140141011423125 NS(ph)TPFMAEHLEETLSAVTNNR ddPTM_KYSE-520_SHP099_60min_R1 1 NSTPFMAEHLEETLSAVTNNR 21 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2;B0QYZ7 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 NS(0.5)T(0.5)PFMAEHLEETLSAVTNNR 85.35 0.0018072 47683000.0 23454.0 24111.0 23862.0 20713.0 29826.0 24575.0 18481.0 27639.0 36398.0 22168.0 True False 22152.959865610144 22952.67136865116 25400.1827005499 22681.557292409467 32173.13651327399 24421.618309366615 20349.239837178633 27543.126759991093 29789.040718912034 21971.608766443012 1.008253883504612 1.0446513777228055 1.1560456482978756 1.0323120866347644 1.4643049972021918 1.111507972355009 0.9261606673179889 1.2535780630709845 1.355796975795805 1.0 14.42335288765368 -4.745147896771831 1.472001377005335 1.1748709603799579 0.9962453141928937 0.11172799810839407 0.15453801940385725 1.2565351620925869 4.494116884333949 0.047885985065466076 0.25601824595374395 1.7982584231055053e-05 4.745147896771831 -0.1786256461870641 NS(ph)WDSPAFSNDVIR ddPTM_KYSE-520_SHP099_60min_R1 10 NSWDSPAFSNDVIR 14 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;A0A2R8Y695;A0A3B3IU98;A0A0C4DGT3;Q6DN90-2 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 NS(1)WDSPAFSNDVIR;NS(1)WDSPAFSNDVIR;NS(1)WDSPAFSNDVIR;NS(1)WDSPAFSNDVIR;NS(1)WDSPAFSNDVIR;NS(1)WDSPAFSNDVIR;NS(1)WDSPAFSNDVIR;NS(1)WDSPAFSNDVIR;NS(1)WDSPAFSNDVIR;NS(0.999)WDS(0.001)PAFSNDVIR 248.75 9.2613e-18 7333830000.0 7117900.0 6817430.0 6363130.0 6074760.0 6367110.0 6632760.0 5962270.0 6531490.0 7807230.0 6487010.0 True False 6723055.897818136 6489910.429628948 6773307.541167976 6652103.363956813 6868165.333099712 6591362.484542594 6564994.4377477 6508833.785651231 6389633.836252316 6429540.138217418 1.0456511279641991 1.009389519330113 1.0534668725228407 1.0346157300452128 1.0682203058777235 1.0251685723778747 1.021067494193735 1.01233270898528 0.9937932883056599 1.0 22.61628412428978 -7.086232749200567 1.4530498571973751 0.998633753317066 1.040326861598796 0.5758603049897923 0.014846735586417682 0.3265170965117206 1.2926018099631107 0.0110280077841902 0.004864711194464782 8.199120153477507e-08 7.086232749200567 0.041693108281729896 NS(ph)YLGLVSLPAASVAGR ddPTM_KYSE-520_SHP099_60min_R1 1 NSYLGLVSLPAASVAGR 17 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5;F6R503;F8WA47 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 NS(0.999)Y(0.001)LGLVSLPAASVAGR 77.899 0.0098006 146540000.0 70164.0 79153.0 72984.0 65227.0 60994.0 72782.0 58714.0 66001.0 96800.0 58419.0 True False 66271.8630515337 75350.37106892478 77688.66541852875 71426.1544687874 65793.88079161258 72327.74054088785 64649.38411341953 65772.05793574921 79223.56012942154 57901.45310929424 1.1445630375880127 1.3013554414030701 1.3417394771057705 1.2335813806600684 1.1363079380308585 1.2491524246267651 1.1165416520961566 1.1359310415163242 1.3682482196065078 1.0 15.821311934452504 -5.5495368990566085 7.966887330558634 1.1766149019153065 1.269961390992907 0.15295798272751326 0.1009614775721558 0.372824173811388 91.42246218526049 0.028741430848803547 0.037531399976268684 2.8213898585463177e-06 5.5495368990566085 0.09334648907760057 NSAIS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 2 NSAISPQK 8 0 Q9H582;Q9H582-2 Q9H582 ZNF644 Zinc finger protein 644 1 NSAIS(1)PQK;NSAIS(1)PQK 167.2 0.0001594 2730900000.0 2596300.0 2704600.0 2196300.0 1720600.0 1950900.0 2325200.0 1927490.0 2348200.0 2650400.0 2677100.0 True False 2452278.0634042663 2574666.9563126373 2337877.012204251 1884125.3066827473 2104424.730897411 2310687.5643108548 2122339.4996896 2340054.6422740016 2169154.171146886 2653382.976752286 0.9242081090027305 0.9703337131769812 0.8810929416098798 0.7100841918375831 0.7931100596240372 0.8708458539743529 0.7998617305849012 0.8819136411051393 0.8175051208785205 1.0 21.33940149170021 -4.99208909093004 9.973985213212679 0.8291172390828032 0.9420936047457564 0.2572282268908036 0.07162666771664439 0.21005396196963164 218.3141581174543 0.01821941507660788 0.03674250402303283 1.0183824562104267e-05 4.99208909093004 0.11297636566295322 NSAPPHRRAQKVMIR ddPTM_KYSE-520_SHP099_60min_R1 2 NSAPPHRRAQKVMIR 15 3 H0YLL1;Q14005-2;Q14005 H0YLL1 IL16 Pro-interleukin-16;Interleukin-16 0 ; 59.185 0.018308 1647180000.0 2893600.0 1842580.0 1838610.0 1098570.0 1942720.0 2265100.0 1519560.0 2135580.0 1801940.0 1297360.0 False True 2733086.2397514093 1754059.691031036 1957129.7424800135 1202977.7625028843 2095601.0114352475 2250962.6707038176 1673171.9542764577 2128172.1714281184 1474753.1192108449 1285866.3997308055 2.1254822743043738 1.3641072598197186 1.5220319489565448 0.9355386864099771 1.6297190842485338 1.7505416357212955 1.301202018053146 1.655049211857195 1.1468945137065425 1.0 20.29430932516386 -10.922418761981547 0.06934476180344763 9.055131373643228e-32 2.159800175339844 0.2653359586431897 0.2986702792156791 255.6003508313671 2.53996428869223 65.82264678035656 22.00709644121137 1.1955871482414644e-11 10.922418761981547 2.159800175339844 NSASATT(ph)PLSGNSSR ddPTM_KYSE-520_SHP099_60min_R1 1 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASAT(0.008)T(0.822)PLS(0.156)GNS(0.007)S(0.007)R 157.84 3.7522e-05 387590000.0 1053900.0 1002900.0 825880.0 712610.0 728500.0 811020.0 727120.0 825550.0 1063800.0 795050.0 True False 995438.0661024355 954719.1786164086 879117.5462547215 780336.2401459917 785828.8054020026 805958.1233474057 800624.3856073436 822686.3597348178 870640.7362156888 788006.4755395394 1.2632358958990406 1.2115626054503206 1.115622236039113 0.9902662787278544 0.9972364819260582 1.0227810917360483 1.0160124446428755 1.0440096436663588 1.1048649512931612 1.0 19.58784795969003 -4.861485500649851 2.300800573437799 1.0254754332448708 1.2527861614031768 0.8731193052443993 0.03237700336339748 0.10192127597857402 1.0643367709391962 0.009580544397102545 0.028468755978618886 1.3756707376347029e-05 4.861485500649851 0.227310728158306 NSASATTPLS(ph)GNSSR ddPTM_KYSE-520_SHP099_60min_R1 6 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASATTPLS(0.998)GNS(0.001)S(0.001)R;NSASATT(0.014)PLS(0.986)GNSSR;NSASATT(0.003)PLS(0.997)GNSSR;NSASAT(0.005)T(0.03)PLS(0.965)GNSSR;NSASATT(0.001)PLS(0.999)GNSSR;NSASAT(0.002)T(0.007)PLS(0.946)GNS(0.037)S(0.007)R 265.23 4.480399999999999e-25 3463950000.0 3940320.0 3938620.0 3136260.0 2705000.0 2783290.0 3147930.0 2870780.0 3178280.0 4019290.0 3085850.0 True False 3721742.594766818 3749402.7832108536 3338428.337793421 2962082.3867120943 3002319.088246176 3128282.601204655 3160986.458512838 3167255.288496128 3289488.2540556067 3058511.769754975 1.2168475634360485 1.2258912390947665 1.0915205136061552 0.9684717959903074 0.981627443103382 1.0228120199306179 1.0335047554079129 1.0355543894963872 1.0755192399730853 1.0 21.544398397184853 -4.89843881391541 3.384738519887988 1.0180237032298407 1.2230598526712178 0.8857160183276889 0.029059296229205653 0.07512752875257668 1.679404319535315 0.008593258583644892 0.020424432778959806 1.2634590951769659e-05 4.89843881391541 0.20503614944137705 NSASATTPLSGNSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 10 NSASATTPLSGNSSR 15 0 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 NSASATTPLSGNS(0.212)S(0.788)R;NSASATTPLS(0.002)GNS(0.235)S(0.763)R;NSASATTPLSGNS(0.096)S(0.904)R;NSASATTPLSGNS(0.082)S(0.918)R;NSASATTPLSGNS(0.094)S(0.906)R;NSASATTPLSGNS(0.14)S(0.86)R;NSASATTPLS(0.001)GNS(0.142)S(0.858)R;NSASATTPLSGNS(0.236)S(0.764)R;NSASATTPLS(0.001)GNS(0.313)S(0.686)R;NSASATTPLSGNS(0.213)S(0.787)R 297.76 2.1725999999999995e-33 16013260000.0 15601090.0 13580640.0 13279750.0 12684320.0 12563200.0 12495710.0 12091620.0 12825980.0 15947750.0 11921180.0 True False 14735666.437698113 12928205.66944376 14135783.933351258 13889833.95912012 13551852.365170103 12417719.638841724 13313958.952439036 12781489.668986224 13052040.610061798 11815567.619737688 1.2471399523017797 1.0941671264144288 1.196369432962128 1.1755536768218742 1.1469489068415115 1.0509625976917225 1.1268150105796282 1.0817499489093507 1.1046477858802657 1.0 23.494185602241902 -1.0000001056765229 0.057102842166314935 0.7968899580071687 1.781030006322379 0.6246923413712253 0.04214596484366982 253.74642111191966 1.0883790243685856 3.9722159387334486 21.075675923616075 0.09999997566708434 1.0000001056765229 0.9841400483152103 NSATFKS(ph)FEDR ddPTM_KYSE-520_SHP099_60min_R1 9 NSATFKSFEDR 11 1 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;O43399-6 O43399 TPD52L2 Tumor protein D54 1 NSAT(0.003)FKS(0.997)FEDR;NSATFKS(1)FEDR;NSATFKS(1)FEDR;NSAT(0.001)FKS(0.999)FEDR;NSATFKS(1)FEDR;NSAT(0.19)FKS(0.81)FEDR;NSATFKS(1)FEDR;NSAT(0.008)FKS(0.992)FEDR;NSATFKS(1)FEDR 163.64 2.5199e-05 18681160000.0 19578760.0 25659840.0 24775820.0 15147970.0 21109260.0 13011080.0 13037770.0 12166160.0 28102400.0 14211570.0 True False 18492687.15350956 24427102.770194903 26372908.99991363 16587628.51439676 22770438.666740257 12929873.02350494 14355755.027973184 12123958.430563096 22999712.563853886 14085666.54623414 1.3128727059390495 1.7341815305663038 1.8723224004592478 1.1776246768266376 1.61656806172428 0.9179454150120993 1.0191747036501622 0.8607301891442607 1.632845168410078 1.0 23.747724499148642 -6.254718761779134 24.653283399478795 1.0732494540328865 1.551379838431988 0.4166511820896227 0.2698090881697908 434.05100003255006 1592233.0220407352 0.08950956123160114 0.0875543323509218 5.562643635189471e-07 6.254718761779134 0.4781303843991014 NSDDAPWS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 NSDDAPWSPK 10 0 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1;H0Y589;Q9UPP1-5 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 NSDDAPWS(1)PK;NSDDAPWS(1)PK 157.33 9.3568e-05 1391740000.0 3279500.0 3079500.0 2889100.0 2951700.0 3038200.0 2880800.0 2761400.0 3098900.0 3679300.0 3330900.0 True False 3097579.597478832 2931556.197576263 3075336.008723444 3232228.6805390352 3277289.0550066708 2862819.8586215014 3040549.260666906 3088150.639188696 3011231.867605171 3301390.8174009826 0.9382650430697567 0.8879761166489608 0.9315274012740181 0.979050606036278 0.9926995125002238 0.8671556979961719 0.9209904033902221 0.9354089866948381 0.9121100875829542 1.0 21.65464250368952 -6.828733803757402 0.004997919329442201 1.8730705470382618 1.1191571742453534e-07 0.1041051940998523 0.039058985159944506 20048.70772775466 64.69761084368625 12037.691770833155 12204.746992551836 1.4834270575839284e-07 6.828733803757402 -1.8730704351225445 NSDGGS(ph)DPETQK ddPTM_KYSE-520_SHP099_60min_R1 1 NSDGGSDPETQK 12 0 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NSDGGS(1)DPETQK 149.0 4.3777e-05 396780000.0 1174600.0 845380.0 854500.0 1191500.0 1191300.0 1171100.0 1455200.0 1064000.0 1145300.0 1213300.0 True False 1109442.596492952 804766.6758587497 909582.4372483399 1304739.8017624635 1285048.5324302046 1163790.7305025125 1602305.8173833878 1060309.2323394665 937342.3906634975 1202551.1059331174 0.9225741766975316 0.6692161953768213 0.7563773653865221 1.0849765929490813 1.0686020129124354 0.9677682094013552 1.3324222226215336 0.881716566645807 0.7794615846585317 1.0 20.19766677617567 -5.255058018208532 24.52477765291352 1.0248062761068555 0.7713719149520508 0.34276915771522387 0.14772482631059244 435.4294893765064 1673431.4703639322 0.04159467467918476 0.06984110581221542 5.5582999794586385e-06 5.255058018208532 -0.25343436115480467 NSDGGS(ph)DPETQKEK ddPTM_KYSE-520_SHP099_60min_R1 7 NSDGGSDPETQKEK 14 1 O75554-2;O75554 O75554-2 WBP4 WW domain-binding protein 4 1 NSDGGS(1)DPETQKEK;NSDGGS(0.999)DPET(0.001)QKEK;NSDGGS(1)DPETQKEK;NSDGGS(1)DPETQKEK;NSDGGS(1)DPETQKEK;NSDGGS(1)DPETQKEK;NSDGGS(1)DPETQKEK 219.66 3.8986e-14 10954180000.0 20945270.0 19646360.0 19077570.0 17804110.0 19480130.0 18422600.0 16909070.0 17509830.0 24332080.0 17836260.0 True False 19783394.119739395 18702519.37581245 20307340.687391255 19496207.261399157 21013105.404221952 18307617.719883516 18618403.812220242 17449092.486555047 19913987.633821208 17678244.612800322 1.1190813654323344 1.0579398455811884 1.1487192949399103 1.1028361519153604 1.1886420775627773 1.0356015611769216 1.0531817055376176 0.9870376198958491 1.1264686098642422 1.0 24.07547169153493 -6.300224631690237 24.634089099431165 1.0404429601427376 1.1200639853958345 0.44095234652755066 0.04664241371333068 447.7803574562536 284402.21150509425 0.015784683967181787 0.01392106322948722 5.009280697893923e-07 6.300224631690237 0.07962102525309689 NSDLLT(ph)SPDVGLLK ddPTM_KYSE-520_SHP099_60min_R1 4 NSDLLTSPDVGLLK 14 0 P05412 P05412 JUN Transcription factor AP-1 1 NSDLLT(0.873)S(0.127)PDVGLLK;NSDLLT(0.888)S(0.112)PDVGLLK;NSDLLT(0.683)S(0.317)PDVGLLK;NSDLLT(0.5)S(0.5)PDVGLLK 259.96 8.7114e-26 2090400000.0 2856570.0 2865800.0 2216440.0 2162090.0 2244120.0 3917300.0 3189660.0 4459920.0 4405720.0 4349220.0 True False 2698110.367668884 2728122.666346499 2359315.2688293885 2367574.38354394 2420719.4767038287 3892850.6776513476 3512101.960881728 4444449.578473149 3605752.307163169 4310689.294441959 0.6259115847546067 0.632873881646733 0.5473174027808966 0.5492333642780985 0.561562040628865 0.9030691872575096 0.8147425437064325 1.0310299060996244 0.836467687850361 1.0 22.03948714911686 -6.264732518061576 24.180821104162277 0.9126063030412824 0.5822288487024613 0.8625651835072251 0.06658445714068492 63.74061832443107 468031.35252117 0.022545656112927935 0.020710924781814296 5.435850223878134e-07 6.264732518061576 -0.33037745433882115 NSDLLTS(ph)PDVGLLK ddPTM_KYSE-520_SHP099_60min_R1 8 NSDLLTSPDVGLLK 14 0 P05412 P05412 JUN Transcription factor AP-1 1 NSDLLT(0.16)S(0.84)PDVGLLK;NSDLLT(0.313)S(0.687)PDVGLLK;NSDLLT(0.002)S(0.998)PDVGLLK;NSDLLT(0.004)S(0.996)PDVGLLK;NSDLLT(0.007)S(0.993)PDVGLLK;NSDLLT(0.184)S(0.816)PDVGLLK;NSDLLT(0.067)S(0.933)PDVGLLK;NSDLLT(0.023)S(0.977)PDVGLLK 246.38 1.2643e-18 12213325000.0 10821400.0 10985630.0 8630880.0 8358110.0 8615980.0 14820570.0 12473890.0 17258160.0 17851010.0 17422450.0 True False 10221115.370073922 10457863.845033202 9187240.334696274 9152462.261442598 9294008.60777973 14728069.325218711 13734872.53463473 17198295.47104481 14609716.571341973 17268100.64746101 0.591907331254568 0.6056174942767003 0.5320353710149998 0.5300213641497578 0.5382183482435436 0.8529061548748983 0.7953898819007763 0.9959575648856053 0.8460523174846154 1.0 24.041606070924196 -6.333728016753488 3.4546924542678537 0.9011011412022791 0.5573353793282647 0.8791431342206877 0.06286234270887973 0.08295227722977974 1.9397048596012134 0.02329409669784574 0.020647455671218732 4.6373725102432385e-07 6.333728016753488 -0.3437657618740144 NSEEEEEEKKK ddPTM_KYSE-520_SHP099_60min_R1 1 NSEEEEEEKKK 11 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 0 63.181000000000004 0.02244 358910000.0 219800.0 197980.0 130360.0 133420.0 151580.0 174370.0 128090.0 163590.0 182020.0 182490.0 False True 207607.25583956315 188468.7436259613 138763.21418337483 146100.1966858143 163508.48362777667 173281.69215073274 141038.58723793158 163022.54447219308 148969.75635079845 180873.28057507152 1.1478050001608484 1.041993284064626 0.7671847038003001 0.8077489180342221 0.9039946812924224 0.9580281377094396 0.7797646329491628 0.9013080536488114 0.8236139460574913 1.0 17.464619776652786 -4.586538733597299 5.095195301191845 0.8639969868159858 1.1250686124385914 0.6239671371164363 0.07247056821726969 0.10668455300253128 5.311681483936646 0.018283243842452567 0.05263505247151283 2.5909633297570203e-05 4.586538733597299 0.26107162562260555 NSESESNKVAAETQS(ph)PSLFGSTK ddPTM_KYSE-520_SHP099_60min_R1 2 NSESESNKVAAETQSPSLFGSTK 23 1 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 NSESESNKVAAET(0.001)QS(0.998)PS(0.001)LFGSTK;NSESESNKVAAETQS(0.997)PS(0.003)LFGSTK 184.46 4.178899999999999e-15 1051200000.0 849050.0 1063410.0 943310.0 663810.0 784720.0 1059190.0 870400.0 1132500.0 1919760.0 1184670.0 True False 801951.5039607871 1012322.1873890471 1004117.2719493639 726898.3028182451 846472.9995539588 1052579.2023234188 958388.5262853889 1128571.6218274876 1571179.977211347 1174174.7454593133 0.6829916135243396 0.8621563283521715 0.8551685137433046 0.6190716549042258 0.7209088790466497 0.8964416977914742 0.8162230792236013 0.9611615529901499 1.3381142656042508 1.0 20.163215701491932 -7.468081563474681 3.1278273413917534 1.1695593525409345 0.7810643294872316 0.6523609537982109 0.11312302213054673 0.15249069348862196 2.890330147039447 0.07964455917731764 0.03021084428056481 3.4034426471722795e-08 7.468081563474681 -0.38849502305370287 NSFNNPAY(ph)YVLEGVPHQLLPPEPPSPAR ddPTM_KYSE-520_SHP099_60min_R1 1 NSFNNPAYYVLEGVPHQLLPPEPPSPAR 28 0 O15357;A0A0A0MTP6;O15357-2 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 1 NS(0.001)FNNPAY(0.916)Y(0.082)VLEGVPHQLLPPEPPSPAR 106.36 0.0001145 170090000.0 12877.0 14213.0 8126.2 8559.2 8536.4 9446.4 8754.3 9700.0 13694.0 7912.3 True False 12162.687140336915 13530.18614585206 8650.027854379716 9372.663794582682 9208.166114528001 9387.44151363584 9639.270077734593 9666.352963997018 11207.514797647706 7842.203177676251 1.5509273178434637 1.725304208435624 1.1030099142295922 1.195156970845013 1.1741810185102222 1.1970413544446656 1.2291533207369458 1.2326068000269903 1.42912833851987 1.0 12.937043304689091 -4.76034334011491 24.999958923975207 1.2038918624718262 1.6381158635253554 0.7229189856523615 0.10961432713206128 13.521720862532256 308383.35505243007 0.027332451447751187 0.06447871415918792 1.7364275187631368e-05 4.76034334011491 0.4342240010535292 NSFNNPAYYVLEGVPHQLLPPEPPS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 3 NSFNNPAYYVLEGVPHQLLPPEPPSPAR 28 0 O15357;A0A0A0MTP6;O15357-2 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 1 NSFNNPAYYVLEGVPHQLLPPEPPS(1)PAR;NSFNNPAYYVLEGVPHQLLPPEPPS(1)PAR;NSFNNPAYYVLEGVPHQLLPPEPPS(1)PAR 134.42 1.8556999999999999e-06 775668000.0 310197.0 403383.0 339263.0 313320.0 284201.0 425879.0 296755.0 395716.0 511232.0 357390.0 True False 292989.75404761074 384003.8751897726 361132.435819993 343097.83859690663 306566.0018175074 423220.9311892062 326753.8914497026 394343.3535568085 418405.15590996324 354223.8026452129 0.827131750773582 1.0840713478941084 1.0195035825463703 0.9685905804036271 0.8654585025856122 1.1947839982201878 0.9224504084977488 1.113260460228809 1.1811887083405113 1.0 18.434301634026408 -6.256550983184436 24.9944408227707 1.079422598609771 0.9648018273011971 0.2876242651575508 0.10090184741874336 629.2867501239645 3217555.441567971 0.03348991443459522 0.032480589700897004 5.539225134292485e-07 6.256550983184436 -0.11462077130857384 NSGS(ph)QEEDGKPK ddPTM_KYSE-520_SHP099_60min_R1 1 NSGSQEEDGKPK 12 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 NS(0.024)GS(0.976)QEEDGKPK 123.63 0.0001669 320180000.0 463990.0 415350.0 371020.0 403080.0 454460.0 473620.0 479850.0 465270.0 535680.0 460670.0 True False 438251.5497588666 395395.96254693967 394936.5428529895 441388.6020095791 490223.41647631256 470663.9618995818 528357.9208847012 463656.0869648347 438414.0153938892 456588.82219583704 0.9598385428079855 0.8659781915934619 0.8649719915473445 0.9667091714747709 1.073664953335299 1.0308267286002628 1.1571854044602112 1.0154784007523654 0.9601943676270016 1.0 18.800536015646326 -5.533387769321977 3.9377458687312354 1.0452828677264265 0.8951753627481727 0.5777372100271072 0.05464577462845811 0.15083937436822867 5.290758431086417 0.01687777520558553 0.0235484877091143 2.9282775010820373e-06 5.533387769321977 -0.15010750497825387 NSHCDKNPPSTEVVIKEES(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 NSHCDKNPPSTEVVIKEESSPK 22 2 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 NSHCDKNPPS(0.003)T(0.003)EVVIKEES(0.497)S(0.497)PK 53.751000000000005 0.037554000000000004 504940000.0 173540.0 197700.0 210290.0 207870.0 202020.0 155830.0 156310.0 163810.0 273300.0 161010.0 True False 163913.39025658675 188202.19524625008 223845.6298758964 227625.90230160565 217917.82466343508 154857.40716779645 172111.34023859043 163241.78134354137 223675.60933234412 159583.5766638846 1.0271319498109859 1.1793331067058492 1.4026858813132177 1.426374236372907 1.3655404222604577 0.970384361631132 1.0785028374260082 1.022923440846057 1.4016204800538488 1.0 17.283952660553847 -6.2525348581348 24.972434613089103 1.0951074756495254 1.2895327796836022 0.2610561738025995 0.15567347715716903 934.8749429501255 2621825.9363410487 0.05427165407488144 0.0535070634640505 5.59068652783086e-07 6.2525348581348 0.19442530403407687 NSHCDKNPPSTEVVIKEES(ph)SPKK ddPTM_KYSE-520_SHP099_60min_R1 1 NSHCDKNPPSTEVVIKEESSPKK 23 3 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 NSHCDKNPPSTEVVIKEES(0.5)S(0.5)PKK 191.4 2.1311e-15 1090000000.0 941730.0 879170.0 924310.0 939270.0 773570.0 668220.0 841980.0 735280.0 1131200.0 611220.0 True False 889490.3596077871 836933.3535389268 983892.50154829 1028537.9383981773 834445.5579887802 664049.3911163766 927095.5553329189 732729.4852956423 925802.5952314221 605805.0663219648 1.4682781789993369 1.381522539288447 1.6241074171297611 1.6978034611740012 1.3774159451240058 1.0961436739841606 1.5303529251770882 1.209513630753001 1.5282186411088703 1.0 19.20849411781772 -5.987893708011089 23.66558163993419 1.2947840439268254 1.5372491421867978 0.34307878871849884 0.1749116632339593 147.91143049182998 289135.8510505561 0.052720454531127364 0.05972525438956301 1.0282679321543282e-06 5.987893708011089 0.2424650982599723 NSIPVS(ph)PVRPKPIEK ddPTM_KYSE-520_SHP099_60min_R1 2 NSIPVSPVRPKPIEK 15 2 H0Y507;Q5TCZ1-2;Q5TCZ1-3;Q5TCZ1 H0Y507 SH3PXD2A SH3 and PX domain-containing protein 2A 1 NSIPVS(1)PVRPKPIEK;NSIPVS(1)PVRPKPIEK 125.73 5.0972e-05 2999100000.0 2077500.0 1922450.0 1890110.0 1860380.0 1681940.0 1930800.0 1809350.0 2338090.0 2459190.0 2266330.0 True False 1962256.9336064241 1830092.6163437197 2011949.5148829285 2037189.9558563558 1814299.1090704787 1918749.1610061033 1992256.7555543086 2329979.711504307 2012663.0871350442 2246252.07937806 0.8735693342795844 0.8147316292525966 0.8956917762497942 0.906928467449838 0.8077005807704449 0.8542002826046864 0.8869248353042917 1.037274370447964 0.8960094486333468 1.0 21.099088408577266 -7.083402631900478 5.892058165619512 0.9743765123777993 0.8591962765766503 0.5954138960348541 0.0438893665142703 0.15855929101060662 8.814230277469514 0.020227687745072807 0.011621988377383714 8.252724894568791e-08 7.083402631900478 -0.115180235801149 NSKPS(ph)PVDSNR ddPTM_KYSE-520_SHP099_60min_R1 4 NSKPSPVDSNR 11 1 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 NSKPS(1)PVDSNR;NS(0.046)KPS(0.954)PVDSNR;NS(0.009)KPS(0.989)PVDS(0.001)NR;NS(0.024)KPS(0.976)PVDSNR 160.65 3.5756e-05 762900000.0 1195800.0 1119420.0 1041360.0 1020040.0 1051940.0 1109780.0 1032853.0 1054260.0 1377400.0 1121550.0 True False 1129466.5902318002 1065641.3829163234 1108487.731834911 1116984.2949137918 1134721.6932801397 1102853.4513680113 1137263.8609138825 1050603.0181261348 1127298.88142836 1111613.9395526953 1.0160601176756463 0.9586434147678367 0.9971876857544246 1.0048311335167832 1.0207875710309489 0.9921191270881246 1.0230744869675785 0.9451150086772834 1.0141100622415515 1.0 20.08422440037278 -4.96998965123033 24.997853716645327 0.9993549107016109 0.9849927142875909 0.03815200662960572 0.02433904179546865 636.1025873118921 529850.7214771904 0.006159184628623987 0.012821296780661729 1.0715448386925965e-05 4.96998965123033 -0.014362196414019923 NSKYEYDPDIS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 5 NSKYEYDPDISPPR 14 1 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 NSKYEYDPDIS(0.999)PPR;NSKYEYDPDIS(1)PPR;NSKYEYDPDIS(1)PPR;NSKYEYDPDIS(1)PPR;NSKYEYDPDIS(1)PPR 120.63 0.00015758 6298620000.0 3169310.0 3370390.0 3278950.0 2389800.0 2665620.0 2577580.0 2089290.0 2154420.0 4155480.0 2431540.0 True False 2993502.0564371482 3208471.40534147 3490316.363505496 2616925.873480433 2875389.1286968864 2561492.3671152485 2300495.822705426 2146946.81986541 3400949.5831261193 2409998.447309492 1.2421178361251959 1.3313167935537007 1.4482649843206599 1.0858620578788976 1.193108290964649 1.0628605881364295 0.9545631970318013 0.8908498767964971 1.4111833088203518 1.0 21.200600786294093 -5.279320435260256 23.120001049150027 1.0790276077097154 1.3396415332598035 0.4027570591031455 0.1421888685277577 290.5046517580096 375618.54479651526 0.040106978203802955 0.059674266833041424 5.2562929850316335e-06 5.279320435260256 0.2606139255500881 NSLDASRPAGLS(ph)PTLTPGER ddPTM_KYSE-520_SHP099_60min_R1 2 NSLDASRPAGLSPTLTPGER 20 1 G5E9M7;Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;F8W708;E7EWF5;E7EQU6;E7ERW0;G5E9M9;Q14135-6;Q14135-5 G5E9M7 VGLL4 Transcription cofactor vestigial-like protein 4 1 NSLDASRPAGLS(0.808)PT(0.191)LT(0.001)PGER;NSLDASRPAGLS(0.5)PT(0.5)LTPGER 185.96 4.7873e-13 1261890000.0 667700.0 603370.0 538150.0 384560.0 491660.0 557470.0 449220.0 531920.0 758700.0 659370.0 True False 630661.3499730488 574383.1995231666 572840.0100704435 421108.4667778203 530350.8448372665 553990.6229470024 494631.54156470974 530074.8936710614 620939.2052705791 653528.494782097 0.9650097203234073 0.8788954178879079 0.876534098580419 0.644361294327692 0.8115190830571188 0.8476916115673225 0.7568630067609101 0.8110968349556078 0.9501333304183102 1.0 19.317890615407173 -7.862789420885356 3.891232678483814 0.9968497044530167 0.8195725410893533 0.3694004412769135 0.07983677340497153 0.23535063666223296 6.165835605107168 0.08033705330889804 0.02139963638221855 1.3715466354615385e-08 7.862789420885356 -0.1772771633636634 NSLESYAFNMK ddPTM_KYSE-520_SHP099_60min_R1 2 NSLESYAFNMK 11 0 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PS65;E9PM13 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ; 196.88 3.8237e-06 1838220000.0 1568820.0 2070750.0 1112420.0 1223500.0 1607430.0 2034100.0 1466230.0 1733840.0 1762380.0 1675540.0 False True 1481794.4272348653 1971268.061740883 1184128.3731349306 1339781.0721413123 1733925.595974384 2021404.4273889137 1614450.8374258121 1727825.7137212974 1442376.2179843993 1660696.0191503945 0.8922731253326815 1.1870131794194194 0.7130313793012679 0.8067587666204794 1.0440957140738216 1.2172031510155943 0.9721531326676864 1.0404226262945138 0.8685371683628852 1.0 20.663356589765353 -5.7920787454640195 24.948015991395938 1.0328507795040918 0.9069480915080654 0.15839357391158126 0.13864535426614663 387.9003255301677 315844.64934125496 0.04485666283261625 0.05086829349227718 1.6140658708846787e-06 5.7920787454640195 -0.12590268799602633 NSLLAGGDDDTMSVIS(ph)GIS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 3 NSLLAGGDDDTMSVISGISSR 21 0 Q8N3U4;Q8N3U4-2 Q8N3U4 STAG2 Cohesin subunit SA-2 2 NSLLAGGDDDTMSVIS(0.996)GIS(0.553)S(0.45)R;NSLLAGGDDDTMS(0.001)VIS(0.934)GIS(0.57)S(0.495)R;NSLLAGGDDDT(0.002)MS(0.027)VIS(0.95)GIS(0.547)S(0.475)R 116.7 3.2848e-07 253990000.0 816369.0 748591.0 728531.0 738909.0 707161.0 637447.0 716278.0 788049.0 825989.0 793036.0 True False 771083.3841787452 712627.5647020001 775493.2739508145 809134.6891989089 762810.5475043034 633468.4568240406 788686.3704396206 785315.4419510197 676010.2190882307 786010.3180126725 0.9810092393294936 0.9066389440074891 0.986619712463255 1.029419933372762 0.970484139995736 0.8059289328741707 1.0034046021605851 0.9991159453690002 0.8600526018506182 1.0 19.584188725404168 -3.861560714506705 18.140484614459826 0.9519886810242989 10.403472616336655 0.016693707288220505 0.06822678601617077 1636.7636999480685 214152.7843655588 0.016545591810453283 968.1691537135748 0.0001375432510931358 3.861560714506705 9.451483935312357 NSLLAGGDDDTMSVIS(ph)GISSR ddPTM_KYSE-520_SHP099_60min_R1 9 NSLLAGGDDDTMSVISGISSR 21 0 Q8N3U4;Q8N3U4-2 Q8N3U4 STAG2 Cohesin subunit SA-2 1 NSLLAGGDDDT(0.027)MS(0.146)VIS(0.803)GIS(0.012)S(0.012)R;NSLLAGGDDDTMSVIS(0.64)GIS(0.18)S(0.18)R;NSLLAGGDDDTMSVIS(0.949)GIS(0.025)S(0.025)R;NSLLAGGDDDTMSVIS(0.923)GIS(0.039)S(0.039)R;NSLLAGGDDDTMSVIS(0.98)GIS(0.01)S(0.01)R;NSLLAGGDDDTMSVIS(0.95)GIS(0.025)S(0.025)R;NSLLAGGDDDTMSVIS(0.998)GIS(0.001)S(0.001)R;NSLLAGGDDDT(0.14)MS(0.107)VIS(0.635)GIS(0.059)S(0.059)R;NSLLAGGDDDTMSVIS(0.992)GIS(0.004)S(0.004)R 306.29 1.3498e-53 2004584000.0 1554226.0 1514446.0 1311657.0 1206567.0 1281823.0 1515060.0 1288868.0 1533548.0 1662290.0 1577273.0 True False 1468009.9855072813 1441689.7409302087 1396208.5089454027 1321238.764912404 1382695.1775247897 1505603.9485570267 1419159.355579501 1528228.4799207947 1360460.0389208263 1563299.588319827 0.9390458466665629 0.9222095059077449 0.893116405439595 0.84516031014402 0.8844722968364983 0.9630936768653477 0.9077974344666447 0.977565970936687 0.8702490866661042 1.0 20.576162850007375 -6.251545240534918 24.720727001565113 0.9400926198706742 0.8951388495130823 0.24508639828543766 0.04088967942330357 933.9547003654002 2333507.347770942 0.013467109156824987 0.013294539570419603 5.603440431832429e-07 6.251545240534918 -0.04495377035759185 NSLLAGGDDDTMSVISGIS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 5 NSLLAGGDDDTMSVISGISSR 21 0 Q8N3U4;Q8N3U4-2 Q8N3U4 STAG2 Cohesin subunit SA-2 1 NSLLAGGDDDTMSVISGIS(0.5)S(0.5)R;NSLLAGGDDDTMSVIS(0.043)GIS(0.478)S(0.478)R;NSLLAGGDDDTMSVISGIS(0.5)S(0.5)R;NSLLAGGDDDTMSVISGIS(0.5)S(0.5)R;NSLLAGGDDDTMSVISGIS(0.5)S(0.5)R 469.62 6.244999999999999e-143 1407220000.0 929250.0 1016860.0 745545.0 625955.0 759650.0 917660.0 780056.0 912380.0 1058650.0 888290.0 True False 877702.6500860509 968008.5192620216 793604.0236141764 685445.574999766 819430.1331827465 911932.5435513069 858911.6730929184 909215.1667310935 866425.8463947526 880420.4416791621 0.9969130753166887 1.0994843752330525 0.9013920918289823 0.778543457819386 0.9307259286482568 1.0357921061124433 0.9755698896027203 1.0327056525368872 0.9841046452105103 1.0 19.747833116675356 -6.2491595260856085 23.91798382314486 1.0057995260439117 0.9389220343153781 0.14757309666832896 0.07705959823940642 963.2181326445665 1876099.6866821535 0.028784891674549427 0.028567216511343852 5.634306571169591e-07 6.2491595260856085 -0.06687749172853352 NSLS(ph)PVQATQKPLVSK ddPTM_KYSE-520_SHP099_60min_R1 5 NSLSPVQATQKPLVSK 16 1 E9PDI4;O00515;A0A0J9YYF6;A0A0J9YVY2;A0A0J9YW63 E9PDI4 LAD1 Ladinin-1 1 NS(0.001)LS(0.999)PVQATQKPLVSK;NS(0.09)LS(0.91)PVQATQKPLVSK;NSLS(1)PVQATQKPLVSK;NSLS(1)PVQATQKPLVSK;NSLS(1)PVQATQKPLVSK 352.64 3.0471e-59 13218700000.0 12467380.0 11800200.0 9725640.0 8374700.0 9134980.0 10555070.0 8987770.0 10795550.0 12244830.0 10859210.0 True False 11775789.57829414 11233300.679538697 10352570.31597421 9170628.970054632 9853850.955073684 10489191.89292558 9896341.503782222 10758102.7567503 10021477.539044876 10763005.847737541 1.0940985952144113 1.0436954916177077 0.9618660867075893 0.8520509140095247 0.9155296479881624 0.9745597132728939 0.9194774808993067 0.9995444496587103 0.9311039760469386 1.0 23.35957770827943 -4.694370925460707 3.00352362154923 0.93897723075331 1.0844974341379956 0.5988177361505752 0.041836911561006725 0.16973098349460455 2.9885701538168723 0.011468559275771905 0.037275584726977576 2.0212920810652668e-05 4.694370925460707 0.14552020338468563 NSLYSTDFIVFNDNDGS(ph)DDENDDKDK ddPTM_KYSE-520_SHP099_60min_R1 1 NSLYSTDFIVFNDNDGSDDENDDKDK 26 1 J3KNV1;O60281-2;O60281 J3KNV1 ZNF292 Zinc finger protein 292 1 NSLYSTDFIVFNDNDGS(1)DDENDDKDK 169.39 1.9895e-10 91913000.0 63759.0 75715.0 71489.0 54445.0 61430.0 47194.0 71736.0 83451.0 78793.0 64621.0 True False 60222.16116958464 72077.53774946806 76097.29532644425 59619.43643051387 66264.19151111181 46899.44474027455 78987.77495589235 83161.5279586098 64486.177409891694 64048.50821437726 0.9402586078666277 1.1253585721031436 1.1881197150094176 0.9308481663766656 1.0345938314334882 0.7322488227719068 1.233249253698646 1.2984147527723706 1.0068334018654972 1.0 15.966877347980795 NSMPTVSFLDQDQS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 NSMPTVSFLDQDQSPPR 17 0 A7KAX9;A7KAX9-2 A7KAX9 ARHGAP32 Rho GTPase-activating protein 32 1 NSMPTVSFLDQDQS(1)PPR 248.18 7.0357e-22 0.0 62414.0 51454.0 38906.0 44197.0 45046.0 69556.0 46098.0 49005.0 67833.0 49011.0 True False 58951.77100077561 48982.07260597142 41413.94301180099 48397.46959168744 48590.86392331996 69121.87520351181 50758.03571312487 48835.01309285301 55516.237130775255 48576.800669981036 1.2135787081014164 1.0083429112333624 0.8525457098987899 0.9963082978742893 1.0002895055488414 1.4229400506037648 1.0449028139576875 1.0053155502073141 1.1428549506160166 1.0 15.56797985491751 NSNLVGAAHEELQQSR ddPTM_KYSE-520_SHP099_60min_R1 2 NSNLVGAAHEELQQSR 16 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ; 113.86 0.00033841 677060000.0 459740.0 498480.0 368540.0 469480.0 469920.0 455340.0 413700.0 474300.0 458050.0 423670.0 False True 434237.30573103117 474532.2725662659 392296.67808484886 514099.2380456912 506900.03052094503 452498.0541602032 455520.8333229154 472654.76400245214 374879.6665008426 419916.61341027234 1.0341036574010636 1.1300631063687692 0.9342251903273998 1.2242888745709124 1.2071445004384407 1.0775902636605086 1.0847887860961019 1.1255919601843734 0.8927478802430063 1.0 18.679743341939282 -7.75432833858081 24.991186553989625 0.946373924638203 1.1037163371365555 0.36778785110073386 0.08171496004816382 156.03487238895502 548386.8065157114 0.05849879647598705 0.021063055503816628 1.7606444474542498e-08 7.75432833858081 0.15734241249835246 NSNPVIAELSQAINSGTLLSKPS(ph)PPLPPK ddPTM_KYSE-520_SHP099_60min_R1 1 NSNPVIAELSQAINSGTLLSKPSPPLPPK 29 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 NSNPVIAELSQAINS(0.005)GT(0.005)LLS(0.021)KPS(0.97)PPLPPK 127.77 7.437600000000001e-05 84466000.0 73123.0 102160.0 73763.0 68299.0 76910.0 104420.0 56395.0 85684.0 110550.0 67081.0 True False 69066.72142291338 97252.08025471368 78517.88100497298 74790.1164251569 82962.37944196018 103768.27604736779 62095.956962160584 85386.78220279604 90476.9067387144 66486.71452822836 1.038804848652728 1.462729523406112 1.1809559482990626 1.1248881367630694 1.2478038662406266 1.5607370101482567 0.9339603769381086 1.2842683355415803 1.3608268566241228 1.0 16.020778467545373 -10.32547951654521 5.139101089857832 0.9999157926434892 1.2464784677993648 0.14321289070525223 0.1788579418617961 0.00016583872379237688 2.1766778659278404e-05 0.16643038892070897 0.040351553473682446 4.726291278771031e-11 10.32547951654521 0.2465626751558756 NSNPVIAELSQAINSGTLLSKPS(ph)PPLPPKR ddPTM_KYSE-520_SHP099_60min_R1 1 NSNPVIAELSQAINSGTLLSKPSPPLPPKR 30 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 NSNPVIAELSQAINSGTLLS(0.001)KPS(0.999)PPLPPKR 149.44 1.5806999999999998e-11 41462000.0 46549.0 61396.0 46116.0 35634.0 38730.0 58548.0 33061.0 38135.0 55680.0 28210.0 True False 43966.83417686903 58446.44400272521 49088.71114820885 39020.64464624723 41777.83065644408 58182.58021472209 36403.128524266176 38002.7185857759 45569.915578576336 27960.08134704788 1.5724859177318238 2.090353145875099 1.7556712564211407 1.3955840886838895 1.4941956047225566 2.080915984919522 1.3019679046144743 1.3591776831431988 1.6298205650030329 1.0 14.771080937645197 -11.015807807042854 0.12547698153574574 2.0171116245803535e-15 2.0309574233479464 0.4105251768659467 0.2484520074091146 56.97978324092812 1.0160058882301999 19.45796735089343 2.7153990386802818 9.64255651528236e-12 11.015807807042854 2.030957423347944 NSNS(ph)PPS(ph)PSSMNQR ddPTM_KYSE-520_SHP099_60min_R1 2 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 2 NS(0.004)NS(0.996)PPS(0.947)PS(0.047)S(0.006)MNQR;NSNS(1)PPS(0.998)PS(0.002)SMNQR 197.17 2.3437e-10 122370000.0 464240.0 439870.0 430920.0 413770.0 432390.0 383510.0 381330.0 382030.0 486360.0 374060.0 True False 438487.68176050344 418737.9849416692 458697.7926963779 453094.57639551355 466416.6330374348 381116.3718341885 419878.5578221598 380704.8270964721 398049.2841378661 370746.11941427656 1.1827168479962742 1.1294467103343189 1.2372288438812302 1.2221154927024866 1.2580485907021854 1.0279713040187592 1.1325231360088277 1.0268612593920843 1.0736438314357126 1.0 18.500072066560875 -6.2669379256709234 24.9954845847236 1.058898932618976 1.2043033623527453 0.7328181838234716 0.04631345605564883 258.53119803575487 1175237.109901667 0.01639769804428263 0.014867382592218216 5.408316192553246e-07 6.2669379256709234 0.14540442973376932 NSNSPPS(ph)PSSMNQR ddPTM_KYSE-520_SHP099_60min_R1 7 NSNSPPSPSSMNQR 14 0 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 NSNSPPS(0.988)PS(0.012)SMNQR;NSNSPPS(0.998)PS(0.002)SMNQR;NSNSPPS(1)PSSMNQR;NSNSPPS(0.959)PS(0.029)S(0.012)MNQR;NSNSPPS(0.993)PS(0.007)SMNQR;NSNSPPS(0.999)PS(0.001)SMNQR;NSNSPPS(0.995)PS(0.005)SMNQR 390.77 1.3794999999999998e-81 3275740000.0 2709090.0 3182280.0 2033060.0 1831880.0 2075360.0 2692710.0 2000570.0 2547120.0 2970110.0 2706390.0 True False 2558811.377262977 3029398.492100337 2164114.3006110135 2005981.3244251937 2238679.0248168805 2675903.79807994 2202807.139281666 2538284.635222276 2430812.894380125 2682413.490139556 0.9539213050743536 1.129355523761077 0.8067787865540531 0.7478270340494112 0.8345764115212566 0.9975731958985646 0.8212034227307222 0.9462689643311548 0.9062036495550352 1.0 21.355100213051845 -4.765330196761616 24.999968120004603 0.8760265491577764 1.0416384188013006 0.3417687101146788 0.08793767933820189 96.84174229988926 622261.9255359389 0.0231989716220141 0.051385021395788585 1.716602747266975e-05 4.765330196761616 0.16561186964352415 NSPAS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 2 NSPASPLK 8 0 E7EMD6;O43572 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 1 NSPAS(1)PLK;NS(0.001)PAS(0.999)PLK 101.43 0.0053457999999999995 622420000.0 923480.0 863960.0 731370.0 626810.0 736370.0 975360.0 795530.0 937540.0 1011840.0 999770.0 True False 872252.7234882609 822454.0647696021 778515.280433375 686381.8339427015 794318.1296278279 969272.4164485777 875949.9360246059 934287.8925634802 828115.3624106796 990912.8156092894 0.8802517332989914 0.8299963950550928 0.7856546692805502 0.692676311306622 0.8016024387972215 0.9781611471566188 0.8839828511916101 0.9428557970450792 0.8357096097313975 1.0 19.918398603471896 -6.204259720054707 8.776691012349943 0.9217392424349039 0.7930137049651651 0.5266386007186656 0.06143840583239671 0.34969871229512267 51.19757687381629 0.02076074755499527 0.020740599115589196 6.247989340668397e-07 6.204259720054707 -0.1287255374697388 NSPAS(ph)PLKELSGK ddPTM_KYSE-520_SHP099_60min_R1 7 NSPASPLKELSGK 13 1 E7EMD6;O43572 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 1 NS(0.001)PAS(0.999)PLKELSGK;NS(0.058)PAS(0.941)PLKELSGK;NS(0.002)PAS(0.983)PLKELS(0.015)GK;NSPAS(1)PLKELSGK;NSPAS(1)PLKELSGK;NS(0.001)PAS(0.994)PLKELS(0.006)GK;NSPAS(0.969)PLKELS(0.031)GK 153.22 6.8774000000000004e-06 2406210000.0 4098550.0 4757520.0 3733060.0 2908420.0 3247550.0 3999350.0 3014480.0 3810200.0 5091470.0 4093730.0 True False 3871195.2612431315 4528961.598016898 3973699.020707188 3184835.3623516397 3503113.708968111 3974388.5731664402 3319213.0568896867 3796983.3055073614 4166987.3935138984 4057462.737073747 0.9540926219411315 1.1162053459259116 0.9793556412481143 0.7849327446069293 0.863375448148802 0.9795255879620918 0.8180513961499772 0.9358023847794487 1.0269933856543907 1.0 21.952146414735555 -5.003544228074376 24.77242392631322 0.9071956148469416 1.0383068891073974 0.2556055808705835 0.08184708463711762 155.98483932267163 1090294.2563426138 0.021309569908281024 0.042900076684910894 9.918723229044558e-06 5.003544228074376 0.13111127426045588 NSPFQIPPPS(ph)PDSK ddPTM_KYSE-520_SHP099_60min_R1 5 NSPFQIPPPSPDSK 14 0 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 NSPFQIPPPS(1)PDSK;NS(0.001)PFQIPPPS(0.998)PDS(0.001)K;NSPFQIPPPS(1)PDSK;NSPFQIPPPS(1)PDSK;NSPFQIPPPS(0.959)PDS(0.041)K 191.37 8.798500000000001e-11 3583000000.0 11125420.0 12289380.0 9087770.0 7451700.0 8179300.0 12640840.0 8670980.0 10698100.0 13344210.0 12366360.0 True False 10508270.774625061 11698979.738064537 9673582.195146108 8159907.327564696 8822964.37614907 12561943.82867847 9547527.279009745 10660990.788055299 10921237.844159378 12256803.67128249 0.8573418532635702 0.9544886294846243 0.7892418329104159 0.6657451278821768 0.7198421882877298 1.0248955735589464 0.7789573476957503 0.8698018728189179 0.8910347376900289 1.0 23.547079466339053 -6.241900863980627 24.994257201769734 0.8964267597188373 0.7983030356774513 0.25532677567297624 0.09667368841496372 1514.5291638530302 1937432.3353314346 0.0343689983938083 0.03431718805314013 5.72926797556401e-07 6.241900863980627 -0.09812372404138603 NSPLDCGSAS(ph)PNK ddPTM_KYSE-520_SHP099_60min_R1 6 NSPLDCGSASPNK 13 0 O75179-6;O75179-2;O75179;H0YM23;O75179-4;O75179-7 O75179-6 ANKRD17 Ankyrin repeat domain-containing protein 17 1 NSPLDCGS(0.313)AS(0.687)PNK;NSPLDCGS(0.001)AS(0.999)PNK;NSPLDCGSAS(1)PNK;NSPLDCGS(0.002)AS(0.998)PNK;NSPLDCGS(0.001)AS(0.999)PNK;NSPLDCGSAS(1)PNK 289.19 3.6533999999999994e-30 6198590000.0 8480750.0 7756810.0 5811180.0 6019250.0 6582970.0 8448170.0 7061450.0 8248510.0 8351060.0 8065520.0 True False 8010305.891544009 7384161.204390819 6185777.961016741 6591317.710246504 7101012.287024311 8395441.837340454 7775290.279110708 8219897.844026708 6834718.017090974 7994065.767679601 1.0020315224238043 0.9237053358061357 0.7737962309524827 0.824526330130473 0.8882854474045049 1.0502092528790088 0.9726327634864586 1.0282499647751406 0.8549739538951598 1.0 22.93049801127379 -6.124006822131297 7.1659314106270715 0.9821569311139728 0.874061573974216 0.3066356692226193 0.07396777283718363 0.32563069486142315 17.65072142344082 0.025452973108901312 0.025496633503885025 7.516110872142774e-07 6.124006822131297 -0.10809535713975682 NSPMAQT(ph)PPCHLPNIPGVT(ph)SPGTLIEDSK ddPTM_KYSE-520_SHP099_60min_R1 1 NSPMAQTPPCHLPNIPGVTSPGTLIEDSK 29 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 NS(0.004)PMAQT(0.996)PPCHLPNIPGVT(0.814)S(0.143)PGT(0.043)LIEDSK 119.7 0.00053305 61595000.0 113630.0 103290.0 91798.0 103530.0 102850.0 97545.0 103770.0 108830.0 117610.0 102050.0 True False 107326.71738421089 98327.79335854917 97715.44596199326 113369.46007257042 110943.70986354962 96936.1854725194 114260.08429760432 108452.49413111294 96254.98870683135 101145.91639369848 1.0611077659967445 0.972138044365725 0.9660839453136939 1.12085059006528 1.09686790944396 0.9583796254829191 1.1296559304763278 1.0722379903996764 0.9516448329181203 1.0 16.626078548979706 -5.231818255488895 24.98415056820289 1.0519188590743798 0.9970127362662403 0.10049930395282702 0.06357002095174884 1473.083422116305 1242480.8475570248 0.017160991584270254 0.02971933048995381 5.863835042353666e-06 5.231818255488895 -0.054906122808139446 NSPNNIS(ph)GISNPPGTPR ddPTM_KYSE-520_SHP099_60min_R1 1 NSPNNISGISNPPGTPR 17 0 Q9NW25;A0A087WVT6;Q9BWW4-2;Q9BWW4-3;Q9BWW4 Q9NW25 SSBP3 Single-stranded DNA-binding protein 3 1 NS(0.003)PNNIS(0.993)GIS(0.004)NPPGTPR 272.14 6.084e-29 0.0 99965.0 97444.0 82332.0 72794.0 86952.0 91284.0 77956.0 92575.0 108120.0 71755.0 True False 94419.74217471294 92762.64397357397 87639.2524558576 79712.31987368595 93794.62771079587 90714.26269591955 85836.55325724253 92253.87893216735 88488.13348339922 71119.3065245453 1.3276246182480138 1.3043243601026808 1.23228496928061 1.1208253253450235 1.3188349590898312 1.275522317763482 1.2069374330529767 1.297170676155678 1.2442209831286732 1.0 16.11795363624698 -8.06111381487649 20.515417014248243 0.9999999993825257 1.257834217943961 0.6355403285393597 0.05884558862438907 1794.767067674541 602489.3860384788 0.05867043254451189 0.015148640548605595 8.687327320213793e-09 8.06111381487649 0.2578342185614353 NSPRPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 NSPRPSPK 8 1 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 NSPRPS(1)PK;NS(0.001)PRPS(0.999)PK;NS(0.027)PRPS(0.973)PK;NS(0.035)PRPS(0.965)PK;NS(0.004)PRPS(0.996)PK;NS(0.03)PRPS(0.97)PK;NS(0.01)PRPS(0.99)PK 81.017 0.010756 11072840000.0 4736280.0 3490820.0 2808970.0 2766760.0 3234060.0 3100110.0 3130590.0 3083560.0 3526420.0 3137320.0 True False 4473549.106859901 3323115.7673723563 2990040.70071091 3029712.0385432714 3488562.122715711 3080761.063562582 3447060.588814084 3072863.850068311 2886111.021813992 3109525.7855980233 1.438659594842224 1.0686889244538795 0.9615744994170762 0.9743325019446969 1.1218952223754568 0.9907494827125515 1.108548642619198 0.9882097985167017 0.9281514998786015 1.0 21.56826315002382 -4.268818590322236 3.6873736645563002 1.0142660008232858 1.4815047105484755 0.8287584072482514 0.05816541718220174 0.10090609215261369 2.5851285107125594 0.014898189106057001 0.12807537372578529 5.384946708096064e-05 4.268818590322236 0.46723870972518977 NSPS(ph)AASTSSNDSK ddPTM_KYSE-520_SHP099_60min_R1 2 NSPSAASTSSNDSK 14 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 NS(0.09)PS(0.91)AASTSSNDSK;NS(0.168)PS(0.832)AASTSSNDSK 188.9 1.3081e-08 1038350000.0 1037750.0 770010.0 661970.0 942710.0 857480.0 955330.0 1047570.0 886460.0 991930.0 895170.0 True False 980183.9387966626 733017.5637914257 704641.6453894483 1032304.8749639044 924958.797606189 949367.4311083294 1153468.5988979607 883385.0771613203 811820.5165204235 887239.4902317219 1.1047568887411292 0.8261777928752723 0.7941955392510942 1.1635019477033146 1.0425131069905555 1.0700238679191134 1.3000645390532688 0.9956557241727428 0.9149959232635135 1.0 19.75896405442421 -5.265430250658394 24.990137921616824 1.0778551064918958 0.9001568455247251 0.25672023286558776 0.12487031853000073 437.9828903078927 2742575.819003544 0.03572239766830131 0.055239726895378455 5.427124060017203e-06 5.265430250658394 -0.17769826096717067 NSPTFKS(ph)FEEK ddPTM_KYSE-520_SHP099_60min_R1 2 NSPTFKSFEEK 11 1 H0YC42;P55327-2;P55327;P55327-3;E5RK35;P55327-4;P55327-7;P55327-5;P55327-6 H0YC42 TPD52 Tumor protein D52 1 NSPT(0.018)FKS(0.982)FEEK;NSPT(0.005)FKS(0.995)FEEK 135.02 7.5981e-05 1055050000.0 1143960.0 1230790.0 1108650.0 853390.0 989300.0 711200.0 665650.0 811610.0 1204830.0 848550.0 True False 1080502.2583722773 1171661.0009465471 1180115.352902719 934495.929018941 1067152.2816529856 706761.1369937558 732940.3981179567 808794.7143411983 986063.2432926741 841032.50716191 1.284733050353149 1.3931221337690658 1.4031744823812513 1.1111293809230112 1.2688597320145494 0.8403493693469032 0.8714768952169122 0.9616687909846683 1.1724436747637434 1.0 19.68180203831192 -5.815297278836921 1.5190665888992347 0.968317710032263 1.3513161467249108 0.6426753909004455 0.11732094758720396 0.2421049304700999 1.161431438137772 0.045425660381658954 0.05921702656417096 1.5300397758982572e-06 5.815297278836921 0.3829984366926479 NSQEDS(ph)EDS(ph)EDKDVK ddPTM_KYSE-520_SHP099_60min_R1 15 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 NSQEDS(1)EDS(1)EDKDVK;NSQEDS(1)EDS(1)EDKDVK;NSQEDS(1)EDS(1)EDKDVK;NS(0.041)QEDS(0.959)EDS(1)EDKDVK;NS(0.001)QEDS(0.999)EDS(1)EDKDVK;NSQEDS(1)EDS(1)EDKDVK;NSQEDS(1)EDS(1)EDKDVK;NSQEDS(1)EDS(1)EDKDVK;NS(0.001)QEDS(0.999)EDS(1)EDKDVK;NSQEDS(1)EDS(1)EDKDVK;NS(0.02)QEDS(0.98)EDS(1)EDKDVK;NS(0.001)QEDS(0.999)EDS(1)EDKDVK;NS(0.002)QEDS(0.998)EDS(1)EDKDVK;NS(0.001)QEDS(0.999)EDS(1)EDKDVK;NSQEDS(1)EDS(1)EDKDVK 264.97 1.4880000000000002e-24 119694760000.0 62839460.0 55068400.0 52323400.0 50308880.0 53448320.0 52411150.0 53052640.0 54146500.0 64056330.0 50294800.0 True False 59353629.88644208 52422831.40464644 55696250.08440005 55090220.82928362 57654398.70465879 52084032.571921036 58415718.59507051 53958678.42938812 52425315.200672224 49849227.20076229 1.1906629895665555 1.051627765331632 1.1172941530284817 1.1051369082897475 1.1565755768381731 1.0448312942176279 1.1718480280508186 1.0824376115616692 1.0516775915007675 1.0 25.571067803292983 -7.878690199062329 2.0403496913252335 1.002256767926902 1.1153404025633469 0.42079297457729636 0.04493280133616084 0.278470297495194 2.449955071960997 0.03954192719987732 0.011204253744149144 1.32223850746179e-08 7.878690199062329 0.11308363463644477 NSQEDS(ph)EDSEDKDVK ddPTM_KYSE-520_SHP099_60min_R1 13 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 NSQEDS(0.907)EDS(0.093)EDKDVK;NS(0.002)QEDS(0.997)EDS(0.001)EDKDVK;NSQEDS(0.63)EDS(0.37)EDKDVK;NS(0.001)QEDS(0.571)EDS(0.428)EDKDVK;NSQEDS(0.885)EDS(0.115)EDKDVK;NSQEDS(0.681)EDS(0.319)EDKDVK;NS(0.01)QEDS(0.99)EDSEDKDVK;NSQEDS(0.649)EDS(0.351)EDKDVK;NSQEDS(0.915)EDS(0.085)EDKDVK;NSQEDS(0.969)EDS(0.031)EDKDVK;NSQEDS(0.999)EDS(0.001)EDKDVK;NSQEDS(0.991)EDS(0.009)EDKDVK;NSQEDS(1)EDSEDKDVK 315.47 1.1294999999999999e-42 53594600000.0 17744480.0 15451150.0 14808920.0 14161700.0 14661060.0 14419880.0 14531640.0 14925590.0 18019870.0 13474330.0 True False 16760158.321656078 14708853.561351014 15763526.678309765 15507623.710129628 15814802.011979518 14329880.180137098 16000639.986339413 14873816.611948906 14747915.851956187 13354957.919070097 1.2549764981081337 1.1013777542756338 1.1803501571353043 1.1611885117201044 1.1841895802155176 1.073000773718266 1.1981048598806467 1.1137299497372408 1.1043026822942683 1.0 23.670872094318252 -13.999999993363737 0.1262453613637103 0.47945259936063644 1.2199044377679769 0.5594242025618266 0.04602857234561587 109.91359687860736 0.8833084924102278 14.378382667065372 0.3634750271927527 1.0000000152805606e-14 13.999999993363737 0.7404518384073404 NSQEDSEDS(ph)EDKDVK ddPTM_KYSE-520_SHP099_60min_R1 2 NSQEDSEDSEDKDVK 15 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 NSQEDS(0.017)EDS(0.983)EDKDVK;NSQEDS(0.119)EDS(0.881)EDKDVK 124.84 0.00016091 21586000000.0 2611010.0 2216520.0 2178790.0 2074770.0 2201280.0 2219140.0 2075680.0 2150360.0 2802820.0 2031660.0 True False 2466172.0703806095 2110035.0521356524 2319238.289587259 2271955.5169976545 2374508.2124300883 2205289.5241118115 2285509.9910846264 2142900.903057795 2293898.541342408 2013661.07300756 1.224720536856378 1.0478600795436495 1.1517520603024298 1.1282710618248737 1.1791995407070044 1.095164202989751 1.1350023207584972 1.064181520804395 1.1391681410994807 1.0 20.941389447584974 -13.999999999864118 0.1761324148273934 0.48311723527744155 1.1544631326001673 0.42535174029926714 0.04755642263935773 126.96151657944304 1.2127834840657796 22.846388090626082 0.14790512611164205 1.0000000003128809e-14 13.999999999864118 0.6713458973227258 NSQPNRYT(ph)NR ddPTM_KYSE-520_SHP099_60min_R1 6 NSQPNRYTNR 10 1 P50750;P50750-2 P50750 CDK9 Cyclin-dependent kinase 9 1 NSQPNRYT(1)NR;NSQPNRYT(1)NR;NSQPNRYT(1)NR;NSQPNRYT(1)NR;NSQPNRYT(1)NR;NSQPNRYT(1)NR 120.87 0.0013884000000000001 3815870000.0 510921.0 620906.0 582490.0 565844.0 576104.0 525360.0 584249.0 488042.0 663257.0 636561.0 True False 482579.1936342373 591076.7437610939 620038.2374169525 619621.6436327986 621440.1072166305 522081.0333676032 643310.5906407551 486349.09621185897 542826.2481483443 630921.5647769637 0.7648798528622702 0.9368466331786341 0.9827501103661617 0.9820898162703319 0.9849720502679521 0.8274896001568174 1.0196363962740298 0.7708550846313007 0.8603704144115571 1.0 19.26710113710765 -7.260249061187213 24.98802561229237 0.8617095704330677 0.9311592885258279 0.05505654605543975 0.09043711933111864 248.2400551708502 5211353.199488234 0.04418337030533516 0.023709644105148975 5.4922581099256244e-08 7.260249061187213 0.06944971809276013 NSS(ph)EASSGDFLDLK ddPTM_KYSE-520_SHP099_60min_R1 4 NSSEASSGDFLDLK 14 0 Q9UK76-3;Q9UK76;J3KSH8;J3KT51;Q9UK76-2 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 NS(0.295)S(0.705)EASSGDFLDLK;NS(0.017)S(0.983)EASSGDFLDLK;NS(0.192)S(0.808)EASSGDFLDLK;NS(0.191)S(0.809)EASSGDFLDLK 324.35 6.2442e-43 5969230000.0 5014170.0 4444500.0 3844650.0 4314300.0 4425550.0 4582900.0 4936600.0 5203150.0 5134050.0 4565130.0 True False 4736023.994599919 4230979.54866949 4092482.290657496 4724329.774858407 4773815.60706497 4554296.421159564 5435639.70457313 5185101.487074342 4201835.938868354 4524686.4998173965 1.0467076547272505 0.935087889258237 0.9044786397516507 1.044123117711927 1.0550599709521593 1.0065440824117564 1.2013295738373249 1.14595817572855 0.9286468662608842 1.0 22.10938640553614 -5.4253850599839115 5.60087720580191 1.0668461999139922 0.959865884834906 0.21586021036999803 0.0793466823722568 0.31795417086629896 14.707440949041704 0.023169991592363486 0.03449689063001132 3.7550432198354165e-06 5.4253850599839115 -0.10698031507908623 NSS(ph)EKLPTELSK ddPTM_KYSE-520_SHP099_60min_R1 2 NSSEKLPTELSK 12 1 P38432 P38432 COIL Coilin 1 NS(0.025)S(0.959)EKLPT(0.016)ELSK;NS(0.323)S(0.676)EKLPTELSK 240.82 3.8558e-15 6117200000.0 3973300.0 3584900.0 3376700.0 3023800.0 3334800.0 3239200.0 3123600.0 3134100.0 4206000.0 2999600.0 True False 3752893.128422815 3412676.0229553967 3594367.4849110255 3311181.0428613774 3597229.787583525 3218982.9512797645 3439363.9713982553 3123228.5386044397 3442296.424631678 2973025.877653484 1.2623143164111492 1.147879690051307 1.2089930033666396 1.1137410769780411 1.209955760769464 1.0827295434846353 1.1568563856944418 1.0505218141826285 1.157842738775141 1.0 21.50350059005371 -1.0000001947071333 0.04162396080987237 0.63523478628536 1.9827330488843067 0.5907729018026806 0.0482319103818643 464.0803738525832 1.472278396434821 12.74879212829921 43.35755261789461 0.09999995516703579 1.0000001947071333 1.3474982625989467 NSS(ph)GPQSGWMK ddPTM_KYSE-520_SHP099_60min_R1 1 NSSGPQSGWMK 11 0 F8VXG7;Q99590-2;Q99590 F8VXG7 SCAF11 Protein SCAF11 1 NS(0.489)S(0.504)GPQS(0.006)GWMK 128.35 0.00019526 0.0 492420.0 414950.0 400640.0 399360.0 442960.0 376400.0 414610.0 448720.0 530130.0 419080.0 True False 465104.48098506645 395015.1791473518 426465.89544666465 437315.05432803766 477818.4319023615 374050.74798150884 456522.8250036598 447163.49505203526 433871.7554897751 415367.2772393066 1.1197427107795606 0.951002163128442 1.0267200109770895 1.0528394466569553 1.150351648011682 0.9005301295460645 1.0990823062372392 1.076549645470531 1.044549677513011 1.0 18.664028039141048 -5.239290174129566 8.672036598653184 1.049927770248423 1.024286564960069 0.001976601722946114 0.07248973788206825 1.4809222693350506 529.2294067430157 0.019267189645509945 0.03266259218152973 5.76381225232082e-06 5.239290174129566 -0.02564120528835412 NSS(ph)LLEPQK ddPTM_KYSE-520_SHP099_60min_R1 3 NSSLLEPQK 9 0 Q6P0N0;G5E9K5;Q6P0N0-2;C9J2Q8 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 NS(0.002)S(0.998)LLEPQK;NS(0.004)S(0.996)LLEPQK;NSS(1)LLEPQK 142.97 0.00037863 1039330000.0 2420840.0 2484640.0 2180460.0 1948760.0 2001510.0 2225520.0 2091100.0 2582080.0 2786500.0 2664460.0 True False 2286551.1793751023 2365274.164879328 2321015.9404593515 2133969.5644839397 2159017.4499659045 2211629.7041652733 2302488.7951693223 2573123.3671420026 2280541.8419486857 2640854.9573185113 0.8658374717015264 0.8956471306099278 0.8788880790394031 0.8080601165051274 0.8175448802982129 0.8374673126353491 0.8718724929547962 0.9743524005402847 0.8635619444485952 1.0 21.33257363640906 -7.1022609262497385 5.164393837649627 0.9385302043545101 0.8507357250605818 0.5175169099645891 0.041065963915805706 0.20164089453197423 8.127589231805254 0.020145224523520442 0.011481677726903462 7.902037270869988e-08 7.1022609262497385 -0.08779447929392825 NSS(ph)NTLPIPK ddPTM_KYSE-520_SHP099_60min_R1 1 NSSNTLPIPK 10 0 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 1 NS(0.226)S(0.774)NTLPIPK 154.23 0.00012866 0.0 520670.0 577240.0 399740.0 558840.0 530550.0 535360.0 499410.0 671190.0 777430.0 492680.0 True False 491787.3971700873 549508.5239450961 425507.8800066137 611951.9855786266 572301.2665834337 532018.6196582912 549895.2365719051 668861.7985469239 636268.309415457 488315.23849923926 1.0071104860080125 1.1253151256019058 0.87137948288148 1.2531904338258328 1.1719914134613378 1.0894982947764797 1.1261070579364312 1.3697336183948843 1.3029867987960573 1.0 18.89745327425174 -5.279072591985206 24.873635496519018 1.1957438884199738 1.0136730248940395 0.3515618788244985 0.11525855257732583 859.0614001290184 1211801.0619254138 0.03326105499544759 0.04945471369264307 5.259293503610939e-06 5.279072591985206 -0.18207086352593427 NSS(ph)PAPPQPAPGK ddPTM_KYSE-520_SHP099_60min_R1 10 NSSPAPPQPAPGK 13 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 NS(0.058)S(0.942)PAPPQPAPGK;NS(0.031)S(0.969)PAPPQPAPGK;NS(0.001)S(0.999)PAPPQPAPGK;NS(0.001)S(0.999)PAPPQPAPGK;NS(0.019)S(0.981)PAPPQPAPGK;NSS(1)PAPPQPAPGK;NSS(1)PAPPQPAPGK;NS(0.009)S(0.991)PAPPQPAPGK;NSS(1)PAPPQPAPGK;NS(0.013)S(0.987)PAPPQPAPGK 241.22 6.9836e-16 23836680000.0 29425120.0 32696190.0 23338690.0 20023450.0 21681500.0 30891730.0 23866260.0 32470300.0 33124430.0 34311190.0 True False 27792849.936077565 31125415.954418257 24843139.3006243 21926472.66773022 23387710.69914003 30698923.254364554 26278894.473051406 32357668.10792496 27109868.510927793 34007219.55030185 0.8172632253856482 0.9152590645753627 0.7305254481001459 0.6447593469174283 0.687727812164886 0.9027178246359182 0.7727445766091204 0.9514940808396007 0.7971798009192775 1.0 25.019337719508357 -7.250232784189696 24.25102806089063 0.9057527052113216 0.780537738499602 0.30303228262732074 0.09316699693419944 673.9764754946747 1458487.3255585593 0.04718428578043663 0.026894579817952114 5.620399879669529e-08 7.250232784189696 -0.1252149667117196 NSS(ph)PGEASLLEK ddPTM_KYSE-520_SHP099_60min_R1 2 NSSPGEASLLEK 12 0 Q76FK4-2;Q76FK4-4;Q76FK4 Q76FK4-2 NOL8 Nucleolar protein 8 1 NS(0.011)S(0.989)PGEASLLEK;NSS(1)PGEASLLEK 258.41 1.7572e-21 3636700000.0 8282500.0 8753300.0 6838200.0 6162000.0 6734100.0 8230300.0 6756900.0 7732000.0 9189600.0 8108900.0 True False 7823053.214245595 8332778.329028831 7279001.313506844 6747634.627327143 7264035.358212248 8178931.644825223 7439953.392989141 7705179.496662373 7521000.290964168 8037061.454628744 0.9733723274866964 1.0367941536927998 0.9056794395064238 0.8395648913995813 0.9038173216939519 1.0176519976856433 0.9257056742678366 0.9587060569537847 0.9357898198765963 1.0 22.938236682698705 -10.226535307145603 0.5862288310892327 1.020131545924346 0.9427339151869042 0.08619634212533045 0.054342319921337354 114.00869639293698 19.177351137776995 3.792518541484101 0.024693394192353797 5.935600911553416e-11 10.226535307145603 -0.07739763073744188 NSS(ph)PINCSR ddPTM_KYSE-520_SHP099_60min_R1 1 NSSPINCSR 9 0 Q15723-2;Q15723-3;Q15723-1;Q15723;Q15723-4 Q15723-2 ELF2 ETS-related transcription factor Elf-2 1 NS(0.034)S(0.966)PINCSR 77.062 0.022262999999999998 0.0 203780.0 194100.0 175140.0 172210.0 193420.0 178530.0 160540.0 174830.0 236430.0 181040.0 True False 192475.917174641 184775.1446499601 186429.80463390818 188576.78662317578 208641.05359074136 177415.7280476589 176768.94991941223 174223.5555356289 193500.27191528043 179436.1264469886 1.0726709330269943 1.0297544218585706 1.03897586470128 1.0509410248492386 1.1627594605503304 0.9887402919393347 0.9851357885371854 0.9709502706362775 1.078379676081822 1.0 17.453110856326518 NSS(ph)SPVSLDAALPESSNVYRDPSAK ddPTM_KYSE-520_SHP099_60min_R1 1 NSSSPVSLDAALPESSNVYRDPSAK 25 1 H7C296;R4GN32;H7C1E9;Q70EL1-6;Q70EL1-7;Q70EL1 H7C296 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NS(0.013)S(0.493)S(0.493)PVS(0.001)LDAALPESSNVYRDPSAK 146.03 7.2852e-07 937960000.0 283810.0 381340.0 317400.0 256390.0 246990.0 296470.0 241120.0 277370.0 347700.0 279300.0 True False 268066.4935387913 363019.85399699054 337860.11185795564 280757.2285135355 266426.70781913586 294619.62076003756 265494.76270442706 276407.86820864474 284566.4448037173 276825.6192921118 0.9683586881311095 1.3113665379862294 1.2204799278402014 1.0142024760261623 0.9624351550280367 1.0642787380497079 0.9590686128810637 0.9984909233309572 1.027962821979411 1.0 18.078617940226938 -5.274185341901983 19.942117772668595 1.0026493677422366 1.1811981176358084 0.4339885308822532 0.0847942833993795 41.55593794249547 65018.263784608695 0.022982437969635703 0.03452926436558867 5.3188122226837244e-06 5.274185341901983 0.17854874989357183 NSSLGS(ph)PSNLCGS(ph)PPGSIR ddPTM_KYSE-520_SHP099_60min_R1 1 NSSLGSPSNLCGSPPGSIR 19 0 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 2 NS(0.001)S(0.005)LGS(0.992)PS(0.002)NLCGS(1)PPGSIR 119.5 1.8148e-05 0.0 277780.0 242380.0 263360.0 310570.0 251830.0 233660.0 247470.0 256830.0 346550.0 258290.0 True False 262370.9896592986 230735.7009802028 280336.60699089867 340086.4794237249 271647.5882833028 232201.64126822367 272486.6826744547 255939.11667457252 283625.2558145764 256001.75154657938 1.0248796661516606 0.901305165243061 1.0950573786987998 1.3284537209966953 1.0611161315975475 0.9070314553139872 1.0643938216370987 0.9997553342052213 1.107903575272886 1.0 17.96579415551724 -6.008341877689253 24.950413867734046 1.0149749564987098 1.0896887352327145 0.08774694373498437 0.10950422993134705 1116.314065326788 3338889.8340874533 0.03800168925346782 0.04112964259361133 9.809754127222095e-07 6.008341877689253 0.07471377873400464 NSSLGSPSNLCGS(ph)PPGSIR ddPTM_KYSE-520_SHP099_60min_R1 5 NSSLGSPSNLCGSPPGSIR 19 0 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 1 NSSLGSPS(0.008)NLCGS(0.991)PPGS(0.001)IR;NSSLGSPSNLCGS(1)PPGSIR;NSSLGSPSNLCGS(1)PPGSIR;NSSLGSPS(0.001)NLCGS(0.999)PPGSIR;NSSLGSPSNLCGS(1)PPGSIR 445.81 3.204399999999999e-124 3250360000.0 1828845.0 1885795.0 1407621.0 1345397.0 1442483.0 1931161.0 1428457.0 1873370.0 2089528.0 1771705.0 True False 1727395.3221378797 1795198.5775639971 1498358.5019332313 1473263.1263716412 1555998.205494433 1919107.9078711995 1572859.3739568575 1866871.7167178444 1710122.3879143598 1756009.0720656319 0.983705237983712 1.0223173707481281 0.8532749208241159 0.8389837785055458 0.8860991837952626 1.0928804061437514 0.8957011663423063 1.063133298350106 0.9738687658957852 1.0 20.74386886760877 -6.230717496675363 24.993366703079797 1.002224118924208 0.9148731925202691 0.27659978136560304 0.07123777639492013 1002.4089386757278 815496.4428190074 0.024524527298063297 0.024521835339753224 5.878716315913239e-07 6.230717496675363 -0.08735092640393893 NSSNTSVGS(ph)PSNTIGR ddPTM_KYSE-520_SHP099_60min_R1 7 NSSNTSVGSPSNTIGR 16 0 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 NSSNTS(0.01)VGS(0.976)PS(0.013)NT(0.001)IGR;NSSNT(0.003)S(0.009)VGS(0.989)PSNTIGR;NSSNT(0.003)S(0.115)VGS(0.86)PS(0.02)NT(0.001)IGR;NSSNTSVGS(1)PSNTIGR;NSSNTSVGS(1)PSNTIGR;NSSNTS(0.001)VGS(0.999)PSNTIGR;NSSNTSVGS(1)PSNTIGR 376.94 1.5945e-72 5590370000.0 5094250.0 4900430.0 4107470.0 3592720.0 3913320.0 4718970.0 3681840.0 4427880.0 5089760.0 4143810.0 True False 4811661.797364396 4665005.9871046115 4372244.088384371 3934171.0286093415 4221276.020254988 4689517.157816959 4054036.3184956345 4412520.717754965 4165587.886408312 4107099.0672353925 1.1715475372263824 1.135839654884381 1.0645577369351005 0.9578953329843943 1.0277999023521123 1.141807655731472 0.9870802364707808 1.0743643251647106 1.0142409078075367 1.0 21.969688316272375 -4.760303922996583 3.119158050354202 1.0336956368958408 1.162647582960253 0.5127481170368333 0.048121689736664315 0.19979211243458925 3.932344460713075 0.012984681443665918 0.037529528182204355 1.7365851262806085e-05 4.760303922996583 0.12895194606441218 NSSPEDRYEEQERS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 NSSPEDRYEEQERSPR 16 2 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 NSSPEDRYEEQERS(1)PR;NSSPEDRYEEQERS(1)PR 146.97 8.0392e-06 349150000.0 204763.0 201581.0 174560.0 175876.0 181400.0 149892.0 163690.0 162518.0 228230.0 180589.0 True False 193404.38820507936 191896.74618075014 185812.416905875 192591.2021609523 195675.147975186 148956.46842838568 180237.38266044992 161954.26298998625 186789.18521010203 178989.1219561159 1.0805371080176467 1.072114014994715 1.0381212828756823 1.0759938931270432 1.0932236877678025 0.8322096158721112 1.0069739473030102 0.9048274063811195 1.0435784206813334 1.0 17.449512384960713 -6.216410106029407 24.999661800063418 0.9546604508950708 1.0703444267323736 0.5064460099651432 0.05645978457942724 348.41303182494676 193434.37058262737 0.017458657605508656 0.01745858687655531 6.07561008001047e-07 6.216410106029407 0.11568397583730283 NSSQSGGKPGS(ph)SPITK ddPTM_KYSE-520_SHP099_60min_R1 3 NSSQSGGKPGSSPITK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NSSQSGGKPGS(0.499)S(0.499)PIT(0.001)K;NSSQSGGKPGS(0.901)S(0.099)PITK;NSSQSGGKPGS(0.5)S(0.5)PIT(0.001)K 173.56 1.8483e-08 12290200000.0 4845240.0 4658690.0 4112020.0 3879510.0 3650480.0 4795170.0 3992450.0 4589680.0 5731160.0 4750530.0 True False 4576464.878453525 4434879.539563749 4377087.3886646265 4248217.463982788 3937752.0076100174 4765241.5653519975 4396045.808557109 4573759.4713193625 4690525.814786523 4708444.000056418 0.9719696949562718 0.9418991793277374 0.9296250286957176 0.9022550685389663 0.8363170524196177 1.0120629161767454 0.9336515011125617 0.971395108716289 0.9961944571774284 1.0 22.16681894035405 -6.298327827457897 24.998681559131356 0.9778099058639746 0.9177764439175973 0.4273779067219935 0.03811893853259506 669.3039508142372 453573.9265791616 0.014084752919113607 0.012421937460799145 5.031206844534842e-07 6.298327827457897 -0.060033461946377376 NSSQSGGKPGSS(ph)PITK ddPTM_KYSE-520_SHP099_60min_R1 4 NSSQSGGKPGSSPITK 16 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NSSQSGGKPGS(0.005)S(0.983)PIT(0.012)K;NSSQSGGKPGS(0.272)S(0.728)PITK;NSSQSGGKPGS(0.093)S(0.477)PIT(0.43)K;NSSQSGGKPGS(0.347)S(0.653)PITK 226.29 1.6559999999999999e-18 16058660000.0 5467490.0 5165680.0 4804200.0 4192110.0 4138780.0 5002410.0 4668380.0 5485750.0 6288210.0 5559730.0 True False 5164197.430528896 4917512.978956245 5113886.418991779 4590526.873996167 4464478.439563075 4971188.103640231 5140305.409398192 5466721.213633673 5146429.576874267 5510475.117604482 0.9371601033149897 0.8923936455580966 0.9280300354962662 0.8330546415735863 0.8101803100970859 0.9021342075855902 0.932824357191325 0.9920598672461061 0.9339357255117281 1.0 22.39374528381225 -6.874140647517458 2.66450815062819 0.9714756650840897 0.8796090711282191 0.5179524883521688 0.03980279050976634 0.24523254021476484 3.5160153473973215 0.020735668690576862 0.012899863859928076 1.3361627263268973e-07 6.874140647517458 -0.0918665939558706 NSSS(ph)PVSLDAALPESSNVYR ddPTM_KYSE-520_SHP099_60min_R1 1 NSSSPVSLDAALPESSNVYR 20 0 H7C296;R4GN32;H7C1E9;Q70EL1-6;Q70EL1-7;Q70EL1 H7C296 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NS(0.024)S(0.139)S(0.837)PVSLDAALPESSNVYR 121.26 9.231600000000001e-07 0.0 82170.0 93423.0 80332.0 71483.0 69466.0 106950.0 80614.0 92163.0 99629.0 92306.0 True False 77611.86629816606 88934.81884921818 85510.32925574447 78276.72282785231 74932.57899252637 106282.48537891194 88763.24983682265 91843.30806400586 81538.88504270802 91488.24065298129 0.8483261427285623 0.972090163877472 0.9346592375744628 0.8555932682623025 0.8190405505418862 1.161706516819422 0.9702148516934035 1.003881016931688 0.8912498968254118 1.0 16.4812986995376 -6.226346202782043 24.999937586992267 1.0034534386353289 0.8917483858950892 0.3899593930461679 0.07451568749080505 713.9958320047699 508641.97598723456 0.024989561049188844 0.02498856123217964 5.938186006432883e-07 6.226346202782043 -0.11170505274023967 NSSS(ph)PVSLDAALPESSNVYRDPSAK ddPTM_KYSE-520_SHP099_60min_R1 2 NSSSPVSLDAALPESSNVYRDPSAK 25 1 H7C296;R4GN32;H7C1E9;Q70EL1-6;Q70EL1-7;Q70EL1 H7C296 USP54 Inactive ubiquitin carboxyl-terminal hydrolase 54 1 NS(0.003)S(0.126)S(0.871)PVSLDAALPESSNVYRDPSAK;NS(0.01)S(0.199)S(0.79)PVS(0.001)LDAALPESSNVYRDPSAK 203.75 5.2337e-16 1173370000.0 1041770.0 967880.0 847500.0 671530.0 763910.0 952650.0 695940.0 814420.0 1111110.0 880880.0 True False 983980.9413829917 921381.5919825011 902131.2060479441 735352.0092971443 824025.3709466624 946704.157982426 766292.4069198697 811594.9671070565 909360.4328037347 873076.0885142706 1.127027706207657 1.055327942322224 1.033279021056592 0.8422542078188238 0.9438185076731643 1.0843317901346372 0.8776925825833615 0.9295810271108929 1.0415592005860679 1.0 19.735747864532918 -4.829032950074037 2.622123504311609 0.9576354859531452 1.1027218642749217 0.3623855694869287 0.06992191472486226 0.2940093121187372 4.013088683835584 0.019367385425057226 0.05570148758918455 1.4824056102478128e-05 4.829032950074037 0.1450863783217765 NSSS(ph)PVSPASVPGQR ddPTM_KYSE-520_SHP099_60min_R1 4 NSSSPVSPASVPGQR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 NSS(0.051)S(0.949)PVSPASVPGQR;NSS(0.001)S(0.999)PVSPASVPGQR;NSS(0.016)S(0.984)PVSPASVPGQR;NSS(0.002)S(0.998)PVSPASVPGQR 281.49 6.4922e-33 2728990000.0 3218310.0 3361040.0 2185510.0 2038910.0 2155860.0 2905980.0 1978080.0 2443410.0 3016060.0 2627220.0 True False 3039783.9287580736 3199570.5933761057 2326391.471539638 2232687.3933793544 2325513.916834534 2887842.700901453 2178043.630600418 2434934.3810061826 2468419.5326853595 2603944.8747462328 1.1673764518745104 1.2287397572838095 0.8934104151365172 0.8574249843122892 0.8930734054272815 1.1090260507849221 0.8364399921533204 0.9350944425209765 0.9479538359758554 1.0 21.31226747644061 -4.760634032504991 24.999994345915486 0.9302974235436381 1.1980581839790156 0.6659365266185127 0.07475679715093295 11.423534395246318 354556.048946697 0.019399419066069238 0.045589922680117904 1.7352656403759688e-05 4.760634032504991 0.26776076043537755 NSSTDQGS(ph)DEEGSLQK ddPTM_KYSE-520_SHP099_60min_R1 1 NSSTDQGSDEEGSLQK 16 0 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 NSSTDQGS(1)DEEGSLQK 162.81 1.4373e-05 0.0 614040.0 549900.0 481350.0 508720.0 563630.0 479140.0 474930.0 483380.0 502130.0 442310.0 True False 579977.9771416073 523481.97858327196 512378.5911872313 557068.5958477543 607984.4743839812 476149.5095320418 522940.55927012913 481703.26760173985 410955.8496672146 438391.47751197295 1.322968184585129 1.1940970694827777 1.1687695073251914 1.2707103682975682 1.3868528599928736 1.0861285721938736 1.1928620561649652 1.098797062241211 0.937417515503574 1.0 18.741860226497284 -7.272434481419654 1.1468359501941174 0.9675370197864893 1.2489805163505276 0.6510085035258981 0.07850584818617176 0.3256764481947757 0.7553052832162735 0.06943881625919529 0.026916703022219195 5.3402983236279036e-08 7.272434481419654 0.28144349656403833 NSSTIIQNPVET(ph)PKKDYSLLPLLAAAPQVGEK ddPTM_KYSE-520_SHP099_60min_R1 1 NSSTIIQNPVETPKKDYSLLPLLAAAPQVGEK 32 2 P38432 P38432 COIL Coilin 1 NS(0.156)S(0.156)T(0.156)IIQNPVET(0.507)PKKDY(0.013)S(0.014)LLPLLAAAPQVGEK 70.835 0.016465 458690000.0 80268.0 99873.0 74752.0 74521.0 77414.0 100550.0 68136.0 86778.0 119600.0 81493.0 True False 75815.37402970907 95074.95116757083 79570.63352742877 81603.45343444434 83506.0413745924 99922.43015287121 75023.85182327814 86476.98737213736 97883.6548706489 80771.03542059456 0.9386455631640706 1.1770921429011314 0.9851382133841048 1.0103058975227341 1.033861221906541 1.2371072084510326 0.9288459833727594 1.0706435409900406 1.2118657927429646 1.0 16.30155041328623 NSSYFVEWIPNNVK ddPTM_KYSE-520_SHP099_60min_R1 4 NSSYFVEWIPNNVK 14 0 P04350;Q9BUF5;K7ESM5;A0A0B4J269;Q13509;Q13509-2;Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371 P04350;A0A0B4J269;Q5JP53;P68371 TUBB4A;TUBB6;TUBB3;TUBB;TUBB2B;TUBB2A;TUBB4B Tubulin beta-4A chain;Tubulin beta-6 chain;Tubulin beta-3 chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain 0 ;;; 162.22 2.953e-07 3503011000.0 4657070.0 6475840.0 3126420.0 3973970.0 5655640.0 6479490.0 4416860.0 5060300.0 4626390.0 4517780.0 False True 4398733.04346112 6164730.925965995 3327954.035648864 4351654.913982358 6100706.69181027 6439049.099465216 4863359.313199553 5042747.000382893 3786354.197801185 4477755.983979655 0.9823521110124668 1.3767456172292403 0.7432191587829912 0.9718383336545231 1.3624473315734813 1.4380080385136216 1.0861153065507576 1.1261772679048703 0.8455919016909047 1.0 22.094344479762444 -7.715378744466766 9.034205561151035 0.9232593237990228 1.1416032141158676 0.1470007330001779 0.20494749433999557 0.5459997993547773 100.82036379777593 0.14772204898075958 0.05498049901801125 1.925844668131827e-08 7.715378744466766 0.21834389031684487 NST(ph)ELAPPLPVR ddPTM_KYSE-520_SHP099_60min_R1 1 NSTELAPPLPVR 12 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 NS(0.304)T(0.696)ELAPPLPVR 107.6 0.0020886 1648300000.0 2998100.0 2635200.0 2243900.0 2359900.0 2322500.0 2793900.0 2529100.0 2626900.0 2850100.0 2276000.0 True False 2831789.416435819 2508601.0364841567 2388545.3843669384 2584184.186470194 2505267.536782637 2776462.2337554153 2784766.1096373834 2617787.897023067 2332593.685174216 2255836.410701208 1.2553168319309027 1.1120491825488263 1.058829165553046 1.1455547814599383 1.1105714602788486 1.2307905930520802 1.2344716560239233 1.1604511234080797 1.0340260819042055 1.0 21.105231019140934 -10.314683543158038 3.4459164006258685 0.9993505423728813 1.1493794293417108 0.28733891515852905 0.07045123042763331 50549836.72850031 67550501.61773647 329439.9363495043 0.018256771159693635 4.8452529745438764e-11 10.314683543158038 0.15002888696882943 NST(ph)PS(ph)EPGSGR ddPTM_KYSE-520_SHP099_60min_R1 1 NSTPSEPGSGR 11 0 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 2 NS(0.232)T(0.768)PS(0.999)EPGSGR 79.089 0.03657 75167000.0 114580.0 108720.0 105110.0 103360.0 112110.0 111080.0 102900.0 101760.0 124290.0 103950.0 True False 108224.01899043287 103496.92800795304 111885.5587819462 113183.30332368276 120932.41918135689 110386.7085169661 113302.13620722276 101407.01831096246 101722.06909592768 103029.0838718763 1.0504220257361196 1.004540893876709 1.0859609207151986 1.0985568256089118 1.1737697224576373 1.0714130842339578 1.0997102172443045 0.9842562362009257 0.9873141182389433 1.0 16.65269212480536 -7.265342089957876 24.747861059862217 0.9893388738201893 1.0841293285175406 0.5272355789815326 0.04033047165644821 261.3419925666725 1657202.9917561072 0.023473771617870835 0.011942453433605501 5.4282258645419034e-08 7.265342089957876 0.09479045469735137 NST(ph)PSEPGSGR ddPTM_KYSE-520_SHP099_60min_R1 5 NSTPSEPGSGR 11 0 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 NS(0.003)T(0.997)PSEPGSGR;NS(0.079)T(0.918)PS(0.003)EPGSGR;NS(0.191)T(0.803)PS(0.005)EPGSGR;NS(0.042)T(0.955)PS(0.003)EPGSGR;NS(0.096)T(0.808)PS(0.096)EPGSGR 168.0 3.7264e-05 3206060000.0 3824070.0 4038930.0 3153410.0 2698840.0 2695000.0 3731850.0 2973770.0 3612100.0 4363470.0 3672450.0 True False 3611941.214005445 3844893.740242474 3356683.8542343946 2955336.9421641678 2907081.167547555 3708558.1398905306 3274387.6927983724 3599570.4681704813 3571173.842127346 3639914.9501228617 0.9923147280909758 1.0563141702288108 0.9221874412535637 0.8119247242478601 0.798667333545645 1.018858459801472 0.8995780774184982 0.9889160921325871 0.9811146389579253 1.0 21.79547331027851 -7.280531981023461 21.844793821501995 0.9887616029109711 0.9272110409030662 0.11638827167882926 0.07751993184610168 431.65489639202656 493866.39841199026 0.0469660687279061 0.022657048179930077 5.241650005861391e-08 7.280531981023461 -0.061550562007904985 NSTFSEIFKK ddPTM_KYSE-520_SHP099_60min_R1 3 NSTFSEIFKK 10 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ;; 168.3 0.00012621 3112270000.0 4270900.0 3850680.0 2829540.0 2500070.0 4139340.0 3510950.0 2663750.0 3022250.0 3548860.0 2860620.0 False True 4033984.6631719265 3665687.5528114857 3011936.6758240694 2737675.9011265473 4465082.508377103 3489036.858729222 2933027.8456947445 3011766.520148452 2904476.483480359 2835277.1323286816 1.4227831971609481 1.2928850979024995 1.0623076811367265 0.9655761230218888 1.5748310658823756 1.2305805379467762 1.03447659921899 1.0622476673646415 1.0244065563689155 1.0 21.4350583266771 -6.743999639846907 6.079161352014477 1.0346120901594404 1.2529153605521957 0.328166813347072 0.15976536807334837 0.22560785678891399 28.686183654098276 0.06773827719486708 0.049925226384053716 1.8030192360724097e-07 6.743999639846907 0.2183032703927552 NSTGGTSVGWDS(ph)PPASPLQR ddPTM_KYSE-520_SHP099_60min_R1 1 NSTGGTSVGWDSPPASPLQR 20 0 Q13424-2;Q13424 Q13424-2 SNTA1 Alpha-1-syntrophin 1 NSTGGTSVGWDS(1)PPASPLQR 298.45 1.6325e-42 0.0 286000.0 313350.0 226630.0 203260.0 219690.0 249760.0 173510.0 171470.0 227690.0 180920.0 True False 270135.00987313467 298296.195652061 241238.93242082087 222577.76928765257 236978.35313488785 248201.1551962319 191050.08409441425 170875.21059139897 186347.23559780986 179317.18955362993 1.5064646649078954 1.6635114368823354 1.3453196150426587 1.2412517162560388 1.3215595990813402 1.3841459138082257 1.065430952659869 0.9529215298140385 1.0392045294803005 1.0 17.452154267691036 -5.827690662209484 0.41237182017790824 0.9409045783106207 1.6746551845610556 0.7813799523084326 0.10436945393273413 0.8329766178787346 0.2584510970821943 0.11036566431704065 0.2638431400626251 1.4869944164773045e-06 5.827690662209484 0.7337506062504349 NSTPS(ph)EPGS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 1 NSTPSEPGSGR 11 0 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 2 NST(0.008)PS(0.992)EPGS(1)GR 66.285 0.031110000000000002 61600000.0 212010.0 176880.0 155730.0 186490.0 175150.0 185410.0 185190.0 196710.0 192920.0 184520.0 True False 200249.3826685432 168382.41929770738 165768.6049768099 204213.95352973716 188933.30853282174 184252.7874156524 203910.81248022904 196027.6589224593 157890.59111743807 182885.29635438777 1.0949452288417325 0.9206996005377202 0.9064075039449326 1.116623138111768 1.0330699750006933 1.0074773155006116 1.1149655907006262 1.0718612312200582 0.8633312478630543 1.0 17.480579564125282 -1.3769769732677957 13.031905329481017 1.0155354971168178 1.1036465864048537 0.0 0.08617783475335947 0.0 0.0 0.019793854549733626 0.0 0.04197812406264566 1.3769769732677957 0.0881110892880359 NSTPS(ph)EPGSGR ddPTM_KYSE-520_SHP099_60min_R1 2 NSTPSEPGSGR 11 0 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 NS(0.299)T(0.145)PS(0.525)EPGS(0.031)GR;NS(0.111)T(0.414)PS(0.439)EPGS(0.036)GR 77.527 0.016891 2123700000.0 1280730.0 1103070.0 940750.0 924610.0 1006490.0 1124990.0 998000.0 1101770.0 1354800.0 1128780.0 True False 1209685.3538280423 1050076.861458174 1001392.250253219 1012484.656405868 1085695.0368552664 1117968.5201161492 1098887.5795413833 1097948.217025051 1108802.4717287207 1118779.887377552 1.0812541121592514 0.9385911145753436 0.8950753061895915 0.9049900412306815 0.9704277392760097 0.9992747748949039 0.9822196411817907 0.9813800099666333 0.9910818778909062 1.0 20.09349479274727 -5.996381874225935 24.84359754221832 0.988620619255137 0.9480509939290875 0.10407051335566964 0.04778670028177787 219.62697188969003 1508024.6329046476 0.015496657525192218 0.01749215551534367 1.0083658421784232e-06 5.996381874225935 -0.04056962532604946 NSTWSGESK ddPTM_KYSE-520_SHP099_60min_R1 5 NSTWSGESK 9 0 P19338 P19338 NCL Nucleolin 0 ;;;; 123.96 0.0052257 3162070000.0 4439590.0 4459820.0 3694320.0 3279650.0 3986090.0 4329950.0 3685530.0 4261300.0 4813610.0 4298230.0 False True 4193317.0925967465 4245563.552873704 3932461.7783209933 3591346.949937268 4299772.6052503325 4302925.175936599 4058099.339706559 4246518.544894897 3939579.765233311 4260151.026172338 0.9843118393772907 0.9965758318874106 0.9230803683160108 0.8430093036311961 1.0093005104360335 1.0100405242681485 0.9525717080862933 0.9968000004709483 0.9247511980280534 1.0 22.02247314551419 NSVLSDPGLDS(ph)PRT(ph)SPVIMAR ddPTM_KYSE-520_SHP099_60min_R1 1 NSVLSDPGLDSPRTSPVIMAR 21 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 2 NS(0.001)VLS(0.002)DPGLDS(0.995)PRT(0.567)S(0.435)PVIMAR 57.688 0.032743 421090000.0 50631.0 62522.0 57866.0 55792.0 50099.0 39579.0 34240.0 56278.0 65827.0 40372.0 True False 47822.397499603794 59518.34927256472 61596.13494887358 61094.45490552352 54041.50627568276 39331.97277991541 37701.31335019734 56082.784753383916 53874.47616363046 40014.33548894073 1.1951316175879287 1.4874256574625504 1.5393516897437343 1.5268141819425933 1.3505536357243493 0.9829470438359795 0.9421951630464371 1.4015673150159955 1.3463793789233471 1.0 15.28822933039078 -6.04884928500284 6.599530527341146 1.1484849024292703 1.4473610480231962 0.4302943378406072 0.16592432019119652 0.2404432424744734 25.708465741397113 0.05862970933651097 0.05951052572471415 8.936155450008115e-07 6.04884928500284 0.29887614559392595 NSVLSDPGLDS(ph)PRTS(ph)PVIMAR ddPTM_KYSE-520_SHP099_60min_R1 3 NSVLSDPGLDSPRTSPVIMAR 21 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 2 NS(0.001)VLS(0.006)DPGLDS(0.986)PRT(0.09)S(0.916)PVIMAR;NSVLSDPGLDS(1)PRT(0.33)S(0.67)PVIMAR;NSVLS(0.001)DPGLDS(0.995)PRT(0.224)S(0.78)PVIMAR 122.35 5.0395e-05 2431590000.0 474977.0 399218.0 358835.0 351523.0 376033.0 420239.0 303537.0 373609.0 480300.0 343483.0 True False 448629.0789668248 380038.968041565 381966.0782562997 384931.6402307562 405624.65776490193 417616.13252125814 334221.48219564394 372313.03757999575 393089.6273776979 340440.0078457307 1.3177918829390922 1.1163169994220492 1.1219776449699368 1.1306886128530074 1.1914717671746426 1.22669522646263 0.9817338576348974 1.0936230437073313 1.1546516811144747 1.0 18.377041064131017 -1.0000000006521705 0.07474128250816671 0.8828694981600187 1.751343223612277 0.37650484534372464 0.07463376023811055 268.8912555402825 1.4785415919756741 2.7992967764260133 24.32305584308397 0.09999999984983218 1.0000000006521705 0.8684737254522583 NSYATTENKT(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 5 NSYATTENKTLPR 13 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;I3L0Y9 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 NSYAT(0.017)T(0.06)ENKT(0.923)LPR;NSYAT(0.076)T(0.255)ENKT(0.669)LPR;NSYAT(0.113)T(0.127)ENKT(0.76)LPR;NSYATTENKT(1)LPR;NSYATTENKT(1)LPR 170.09 7.1635e-06 2734370000.0 2473910.0 2603340.0 2830210.0 2085710.0 2215290.0 2194300.0 2221540.0 2775840.0 3136700.0 3205860.0 True False 2336677.28068268 2478271.638706993 3012649.865096107 2283935.2513084253 2389620.719724094 2180604.5597657436 2446114.943341046 2766211.2589259264 2567154.349772279 3177458.574521338 0.7353918944591384 0.7799540357753766 0.9481319093357312 0.7187930850215677 0.7520540909283369 0.6862731672573376 0.769833779409551 0.8705735083714307 0.8079269295144164 1.0 21.599441885829872 -8.342941379256091 0.9794005224098363 0.9988034710094256 0.7750996274215863 0.46969899088960043 0.07053740986415874 1.1018516589472502 1.8770711479808835 0.07190965046002465 0.023429994118066663 4.540028934851034e-09 8.342941379256091 -0.22370384358783924 NSYNNSQAPS(ph)PGLGSK ddPTM_KYSE-520_SHP099_60min_R1 3 NSYNNSQAPSPGLGSK 16 0 Q9UHB7 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 NSYNNSQAPS(1)PGLGSK;NSYNNSQAPS(1)PGLGSK;NSYNNSQAPS(1)PGLGSK 429.73 1.0616999999999997e-117 2163820000.0 4304860.0 5104200.0 3373240.0 3160980.0 3221580.0 4785160.0 3376890.0 4877310.0 5378500.0 4779880.0 True False 4066060.8342743465 4858986.570439607 3590684.44777483 3461398.588816711 3475100.017717202 4755294.041475023 3718258.996470436 4860391.749982713 4401899.980951383 4737533.981890364 0.8582652599046715 1.0256362464129032 0.7579226790774555 0.7306329837523506 0.7335250852027816 1.00374879835217 0.7848511505529681 1.0259328521044881 0.9291542810622634 1.0 22.175704860962284 -7.265451779766058 24.9953287195535 0.9831576792242368 0.8436620149277749 0.3007531313410169 0.0998504206106683 487.77931856067727 3038602.354616117 0.05477813565371326 0.027829639823646064 5.426855030022466e-08 7.265451779766058 -0.13949566429646187 NT(ph)ETSKSPEKDVPMVEK ddPTM_KYSE-520_SHP099_60min_R1 1 NTETSKSPEKDVPMVEK 17 2 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NT(0.276)ET(0.234)S(0.234)KS(0.256)PEKDVPMVEK 53.909 0.050276 26145000000.0 216430.0 180870.0 180860.0 180720.0 188790.0 180100.0 164750.0 197320.0 243480.0 192230.0 True False 204424.1964574912 172180.73370859516 192518.5249862316 197895.57446455088 203646.69893183804 178975.92909529703 181404.53780505297 196635.54297483404 199270.16963131784 190526.99175267672 1.072940870881195 0.9037078270364083 1.0104527616545802 1.0386747444238207 1.068860097241193 0.9393730906517742 0.9521198867220576 1.0320613429413026 1.0458894448403964 1.0 17.53963587167901 NT(ph)GSPDRKPSKK ddPTM_KYSE-520_SHP099_60min_R1 1 NTGSPDRKPSKK 12 3 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 NT(0.986)GS(0.014)PDRKPSKK 80.632 0.0061337 1780300000.0 1412400.0 2147500.0 1093500.0 1100200.0 1609100.0 3127300.0 951770.0 1198200.0 1407000.0 6098100.0 True False 1334051.356450403 2044330.8765367838 1163988.7596618605 1204762.677212808 1735727.015473385 3107781.3606869685 1047984.1999800615 1194043.7238619835 1151524.2675836363 6044075.578250015 0.22072049549662656 0.33823714645353486 0.19258342232690587 0.19932951890082615 0.2871782447128073 0.5141863830873517 0.17339032022552767 0.19755605442109703 0.19052115624223306 1.0 22.527090270145376 -10.810923542349208 2.626048318274848 1.2358498758864367 0.26010497719941506 0.8359405305210642 0.09872822604320568 29754872.736049447 20693378.90452462 44559117.45893716 0.02698926385693896 1.5455265059120822e-11 10.810923542349208 -0.9757448986870216 NT(ph)PS(ph)QHSHS(ph)IQHS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 NTPSQHSHSIQHSPER 16 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 4 NT(1)PS(0.997)QHS(0.135)HS(0.869)IQHS(0.999)PER 84.67399999999999 0.0023535 101280000.0 124640.0 87258.0 70502.0 109230.0 70559.0 96091.0 87085.0 96021.0 92786.0 78311.0 True False 117725.97073632006 83065.99470307173 75046.67172718846 119611.186358803 76111.59187420708 95491.2604258533 95888.40166769674 95687.92556246994 75938.40134471586 77617.22546503601 1.516750567041999 1.070200515483386 0.9668816590332064 1.5410391912641077 0.9806018112370279 1.2302843840877686 1.235401047811111 1.232818166188821 0.978370469824686 1.0 16.244089242466995 -13.99999991195523 0.05520190582906168 0.20628862655156294 1.5501333254891378 0.152697092478299 0.18913789728441355 1057.9221483011302 4.283006991811567 116.23336477599935 22.25725859084164 1.0000002027305948e-14 13.99999991195523 1.343844698937575 NT(ph)S(ph)FPLDADKILLRGCVIRNTDFCHGLVIFAGADTK ddPTM_KYSE-520_SHP099_60min_R1 2 NTSFPLDADKILLRGCVIRNTDFCHGLVIFAGADTK 36 3 O43520;A0A2R8Y5C5;A0A3B3IRQ1 O43520 ATP8B1 Phospholipid-transporting ATPase IC 2 NT(0.801)S(0.813)FPLDADKILLRGCVIRNT(0.385)DFCHGLVIFAGADTK;NT(0.855)S(0.865)FPLDADKILLRGCVIRNT(0.279)DFCHGLVIFAGADTK 72.585 0.006294 3606700000.0 954570.0 1039380.0 1027600.0 765570.0 756800.0 750970.0 563760.0 657740.0 1197050.0 643190.0 True False 901618.0992118826 989446.6246588139 1093840.7402181337 838329.5426229864 816355.8543970279 746282.9176718234 620750.362567385 655458.4534576709 979695.8951748351 637491.8369942482 1.4143210107018476 1.5520930108282174 1.715850583084412 1.3150435722842835 1.280574600368402 1.1706548607595062 0.9737385273734661 1.0281832886647375 1.536797553038588 1.0 19.28204734299134 -5.664605598651643 1.9482597471355119 1.1415568427970915 1.5565896607756793 0.5213085486755236 0.16852148702720907 0.2629830221193336 2.046193765137492 0.057138991455208364 0.08028397152723958 2.164683472783625e-06 5.664605598651643 0.4150328179785878 NT(ph)SPSLGESRGTK ddPTM_KYSE-520_SHP099_60min_R1 2 NTSPSLGESRGTK 13 1 C9J052;Q9NSU2-2;Q9NSU2;Q9NSU2-1 C9J052 TREX1 Three-prime repair exonuclease 1 1 NT(0.25)S(0.25)PS(0.25)LGES(0.25)RGTK;NT(0.25)S(0.25)PS(0.25)LGES(0.25)RGTK 79.82 0.033127 4723600000.0 5802000.0 6936000.0 5519300.0 5160100.0 5972400.0 5743300.0 5013700.0 6490000.0 7713100.0 6372400.0 True False 5480151.493999748 6602784.148851744 5875082.909192242 5650514.3525593635 6442393.901692399 5707453.934331043 5520533.724996626 6467487.7047773935 6312595.471428107 6315945.493652178 0.8676692190436978 1.045414998512551 0.9301984817786942 0.8946426719860702 1.0200205033699716 0.90365788306237 0.8740629143403822 1.0239935907106106 0.9994695929172539 1.0 22.590567290177642 -7.291654199812044 24.95489267515451 1.0087987089654993 0.9384974728267528 0.26951973361613957 0.05554013658085875 1003.6642911579838 828936.5011332447 0.02993763092864915 0.014384907780714362 5.109116434665638e-08 7.291654199812044 -0.0703012361387465 NTAARQT(ph)LLLASRGFPR ddPTM_KYSE-520_SHP099_60min_R1 1 NTAARQTLLLASRGFPR 17 2 A6NKG5 A6NKG5 RTL1 Retrotransposon-like protein 1 1 NT(0.341)AARQT(0.659)LLLASRGFPR 93.71600000000001 0.0049456000000000005 45346000.0 18759.0 222660.0 118230.0 53110.0 142440.0 83891.0 115600.0 119190.0 256230.0 54588.0 True False 17718.400874860614 211963.07938052624 125851.29497468854 58157.558431896236 153649.21762726307 83367.40515121362 127285.97614727849 118776.55770915517 209705.09103266214 54104.39278882137 0.32748543993495205 3.917668574672931 2.326082753870051 1.0749137996778757 2.839865853905468 1.5408620419530583 2.3525996612529645 2.19532188768406 3.875934655642042 1.0 15.723458112185074 -4.221297416413419 23.12237038884925 2.334355944999381 0.3274701494690421 0.28611922509098064 0.9568149965243932 12237.811976962748 7048783.879197165 0.22871726188647207 65.0645733734907 6.0076217865595856e-05 4.221297416413419 -2.006885795530339 NTDDDRPPRR ddPTM_KYSE-520_SHP099_60min_R1 4 NTDDDRPPRR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;;; 94.465 0.0019820999999999997 1449808000.0 601980.0 536050.0 424606.0 351394.0 597520.0 487806.0 409420.0 483445.0 497069.0 379687.0 False True 568586.9693826211 510297.35337254585 451976.782153621 384790.38010954147 644541.4245762578 484761.4218115523 450808.16915414145 481768.0421319108 406813.7996897871 376323.26857201627 1.5109003797191767 1.356007975028765 1.2010333133762285 1.0224995695048416 1.7127333821849848 1.2881516034100464 1.1979279699200187 1.2801973259852142 1.0810221787068048 1.0 18.521612970368285 -7.742982463506726 1.0805667083274197 0.996702792932732 1.3361079378352492 0.30439581091326606 0.17523565330888694 0.647020453154778 1.5585363024097165 0.16965338565270432 0.05734271247402093 1.8072470998525824e-08 7.742982463506726 0.33940514490251716 NTDKNGEELHGGKR ddPTM_KYSE-520_SHP099_60min_R1 3 NTDKNGEELHGGKR 14 2 Q96QK1 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 0 ;; 255.45 2.3511e-19 2979098300.0 3616207.0 3477266.0 2576009.0 2261696.0 3150914.0 2923135.0 2003369.0 2529177.0 3077643.0 1832415.0 False True 3415608.788980066 3310212.9218773223 2742062.661900132 2476646.9078363026 3398873.005551744 2904890.6301831254 2205889.0895172735 2520403.8753013522 2518820.6122664586 1816181.228697297 1.8806541632577052 1.8226225827978952 1.5097957288474717 1.3636562633194607 1.8714393430823386 1.5994497599045958 1.2145754259884651 1.3877491053627822 1.3868773514816843 1.0 20.792476739297477 -1.0000000015054191 0.06023837182916825 0.2103285634466006 4.234773235733343 0.65222159302215 0.16388210911288117 228.16120374953624 1.0288726146091938 13.887514827909994 80.5337901475024 0.09999999965336444 1.0000000015054191 4.024444672286742 NTDVAQS(ph)PEAPK ddPTM_KYSE-520_SHP099_60min_R1 5 NTDVAQSPEAPK 12 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NTDVAQS(1)PEAPK;NTDVAQS(1)PEAPK;NTDVAQS(1)PEAPK;NTDVAQS(1)PEAPK;NTDVAQS(1)PEAPK 255.72 1.7209999999999998e-16 2248530000.0 6163990.0 6378840.0 4825020.0 4298750.0 5160630.0 6311710.0 5331620.0 7058980.0 6642550.0 6745030.0 True False 5822061.187090579 6072390.9515659595 5136048.509504965 4707301.907533683 5566742.221031892 6272316.276680053 5870592.1811968135 7034494.045958321 5436430.365058775 6685274.281753926 0.8708784324647221 0.9083233829521843 0.7682629452500921 0.7041299592421048 0.8326871847614636 0.93822871169236 0.8781378195984242 1.0522371632765342 0.8131948123499417 1.0 22.672555321386803 -6.219447899959971 4.667623438633848 0.9364754218982219 0.8115220544782171 0.36454046200772217 0.07905409218360132 0.2419154164846761 12.434415159775737 0.027525207864423907 0.026871869051144366 6.033260814633134e-07 6.219447899959971 -0.12495336742000474 NTDVAQS(ph)PEAPKQEAPAK ddPTM_KYSE-520_SHP099_60min_R1 8 NTDVAQSPEAPKQEAPAK 18 1 Q9P2E9;A0A087WVV2;Q9P2E9-3;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NT(0.001)DVAQS(0.999)PEAPKQEAPAK;NT(0.029)DVAQS(0.971)PEAPKQEAPAK;NTDVAQS(1)PEAPKQEAPAK;NTDVAQS(1)PEAPKQEAPAK;NTDVAQS(1)PEAPKQEAPAK;NTDVAQS(1)PEAPKQEAPAK;NTDVAQS(1)PEAPKQEAPAK;NTDVAQS(1)PEAPKQEAPAK 284.28 6.0864e-38 20429180000.0 15848740.0 17066110.0 14105990.0 11765330.0 12838170.0 14911660.0 12388050.0 15135800.0 19103660.0 15107770.0 True False 14969578.798520092 16246228.458846638 15015284.685782002 12883503.425824538 13848460.939804833 14818590.798740592 13640354.989717048 15083297.442522265 15634916.908078754 14973926.911467211 0.9997096210651469 1.0849677946808385 1.0027619858544334 0.860395773399842 0.9248382886922947 0.9896262273987954 0.9109404012965431 1.0073040647053844 1.0441427289260607 1.0 23.835949281918342 -10.223269702484183 13.630006672103924 0.9999999333492611 0.9780897201651453 0.007329791328209545 0.062486193352941276 0.0 0.0 0.06590325731427228 0.01598388770464731 5.980400890954763e-11 10.223269702484183 -0.02191021318411579 NTDVAQS(ph)PEAPKQEAPAKK ddPTM_KYSE-520_SHP099_60min_R1 3 NTDVAQSPEAPKQEAPAKK 19 2 Q9P2E9;A0A087WVV2;Q9P2E9-3;V9GY78 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 NTDVAQS(1)PEAPKQEAPAKK;NTDVAQS(1)PEAPKQEAPAKK;NTDVAQS(1)PEAPKQEAPAKK 191.99 5.6863e-13 2379550000.0 1854130.0 1815070.0 1618070.0 1590580.0 1594120.0 1521970.0 1393770.0 1475400.0 2306530.0 1501610.0 True False 1751277.7127834817 1727871.3127243866 1722373.381203537 1741748.2449746854 1719568.1746979246 1512470.8206838928 1534665.8734843594 1470282.1817609502 1887722.2948896152 1488306.9036349016 1.1766912513180747 1.160964387455568 1.1572703029173441 1.1702883596930191 1.1553854722424604 1.0162358428829266 1.0311487971575184 0.987889109544591 1.2683689703240768 1.0 20.505240624464577 -6.191291968356525 7.12460757829711 1.0582558644275164 1.1644627511263894 0.32572931685148987 0.0743647950539132 0.3226200861272497 28.435412055021896 0.023999716192500277 0.02397831839637807 6.437363476601909e-07 6.191291968356525 0.10620688669887302 NTEES(ph)SSPVRK ddPTM_KYSE-520_SHP099_60min_R1 3 NTEESSSPVRK 11 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.551)S(0.291)S(0.158)PVRK;NTEES(0.333)S(0.333)S(0.333)PVRK;NTEES(0.656)S(0.247)S(0.097)PVRK 144.2 8.4332e-05 4187440000.0 4218680.0 3992270.0 3725870.0 3417680.0 3544850.0 3618860.0 3625050.0 3598650.0 4354010.0 3568130.0 True False 3984661.4106699205 3800475.3566805637 3966045.5418027816 3742495.2796370406 3823809.5275625046 3596273.3523920453 3991505.4310786426 3586167.1230812226 3563431.539660147 3536519.144163138 1.1267184619222042 1.0746372921388179 1.121454565953236 1.0582426185402833 1.0812353536594101 1.0168963338789017 1.1286537039298765 1.014038656909302 1.007609854322838 1.0 21.753898640358553 -6.441133518503558 0.2563579515901433 0.9849998951410306 1.1385965124716075 0.508612642971687 0.0342251116061937 2.5659057542716726 0.41449040860021436 0.0650948584970465 0.135114240758792 3.6213164837413156e-07 6.441133518503558 0.15359661733057695 NTEESS(ph)SPVRK ddPTM_KYSE-520_SHP099_60min_R1 3 NTEESSSPVRK 11 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.194)S(0.72)S(0.086)PVRK;NTEES(0.171)S(0.415)S(0.415)PVRK;NTEES(0.03)S(0.627)S(0.343)PVRK 214.46 1.1962e-09 1598430000.0 2026080.0 1913980.0 1760830.0 1647970.0 1800070.0 1758660.0 1759670.0 1776140.0 2170490.0 1733190.0 True False 1913689.3035096533 1822029.5278574508 1874335.9192276113 1804592.5733197518 1941725.2680027196 1747683.5505981974 1937554.6163242343 1769978.9848941935 1776383.729600291 1717835.2850014146 1.1140121059441839 1.0606543850657664 1.0911033994892403 1.050503845785346 1.1303326255759851 1.0173755108288849 1.1279047725013045 1.030354307160908 1.034082688317133 1.0 20.712160279313924 -7.428811501777047 8.279037893840117 1.0220095051928837 1.0817365201000648 0.4145367655933272 0.03437521579873445 0.29929815561194195 23.682326187430174 0.017274532970537344 0.008237753031761157 3.725533716993746e-08 7.428811501777047 0.05972701490718113 NTEESSS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 2 NTEESSSPVR 10 0 Q5T200-2;Q5T200;Q5T9K0 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NTEES(0.038)S(0.161)S(0.801)PVR;NTEES(0.019)S(0.084)S(0.897)PVR 134.49 0.00059872 220046000.0 678540.0 620050.0 605570.0 558300.0 596200.0 643670.0 595460.0 652740.0 760300.0 621010.0 True False 640900.0335640445 590261.8672859753 644606.011146258 611360.6641409843 643117.5480860303 639652.6167727361 655654.9079295709 650475.7972906618 622248.6856032973 615508.3345384691 1.0412532172202267 0.9589827369739443 1.0472742203070369 0.9932613903585971 1.0448559540111892 1.039226572378376 1.065225068676292 1.0568107055421314 1.0109508688779696 1.0 19.231418866671984 -5.775062537211111 24.899234440629368 1.0406234983169893 1.0091836888130805 0.14730633626639056 0.029446326031661425 341.13524833133806 623494.4556956565 0.008670476768262304 0.009884217268715372 1.678562292364897e-06 5.775062537211111 -0.03143980950390879 NTEESSS(ph)PVRK ddPTM_KYSE-520_SHP099_60min_R1 5 NTEESSSPVRK 11 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 NT(0.008)EES(0.025)S(0.025)S(0.942)PVRK;NT(0.023)EES(0.032)S(0.036)S(0.909)PVRK;NTEES(0.139)S(0.305)S(0.556)PVRK;NTEESS(0.001)S(0.999)PVRK;NTEES(0.002)S(0.047)S(0.951)PVRK 180.49 2.3003e-06 14735310000.0 21245900.0 18961540.0 18196630.0 17311200.0 18247690.0 17765010.0 17708770.0 18585910.0 22241470.0 17483340.0 True False 20067347.574348357 18050599.15654822 19369613.88543742 18956451.243197914 19683679.38784631 17654131.982994143 19498945.29254013 18521439.816193987 18202979.709831845 17328451.20943271 1.158057770530856 1.0416741195383008 1.1177925627244523 1.0939495407921398 1.135916831224451 1.018794569094793 1.1252560922424455 1.0688456569108655 1.0504677821364143 1.0 24.04663937858712 -8.680888484533524 0.31878887343201057 0.9793696711723827 1.1094414601635858 0.39094938262677525 0.03940191494227382 3.9864130341963477 0.7407091791528055 0.1547397140002391 0.04346428190659137 2.08502619457224e-09 8.680888484533524 0.13007178899120309 NTELAVFHDETEIQNQTDLLSLSGK ddPTM_KYSE-520_SHP099_60min_R1 2 NTELAVFHDETEIQNQTDLLSLSGK 25 0 A0A0A0MSX9;P41252;J3KR24 A0A0A0MSX9 IARS Isoleucine--tRNA ligase, cytoplasmic 0 ; 248.58 1.0371e-28 974320000.0 520700.0 440780.0 247813.0 525700.0 230032.0 308388.0 309582.0 388650.0 335260.0 249196.0 False True 491815.7330102836 419604.26717573137 263787.4224948193 575662.3699425319 248134.2096969569 306463.23610128 340877.5697891583 387301.86386159237 274385.2352168371 246988.31731155407 1.9912509966611143 1.698883055454147 1.06801578862564 2.3307271218678105 1.0046394598654536 1.2408005343617268 1.3801364109022662 1.5680979087486355 1.110923942490463 1.0 17.914083277561364 -1.0000000000000004 0.16571395894952237 1.0195756285741648 4.355368340863505 0.29359751362845665 0.3618706162866042 86.69126655240383 0.9199573121683785 0.9886117468463804 71.23968157603096 0.0999999999999999 1.0000000000000004 3.33579271228934 NTENCDFLFS(ph)PPEVTGR ddPTM_KYSE-520_SHP099_60min_R1 8 NTENCDFLFSPPEVTGR 17 0 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91;Q8IX09;C9JWI7;F8WC55 A0A494BZT8 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 1 NTENCDFLFS(0.999)PPEVT(0.001)GR;NTENCDFLFS(1)PPEVTGR;NTENCDFLFS(1)PPEVTGR;NTENCDFLFS(1)PPEVTGR;NTENCDFLFS(1)PPEVTGR;NTENCDFLFS(0.999)PPEVT(0.001)GR;NTENCDFLFS(1)PPEVTGR;NTENCDFLFS(1)PPEVTGR 273.8 6.817e-30 2754125000.0 2454320.0 2325940.0 2083030.0 1782410.0 1900900.0 2260490.0 1908500.0 2114710.0 2794970.0 2350650.0 True False 2318173.9770343755 2214198.3510928843 2217305.4467658405 1951809.7104988948 2050490.0153584953 2246381.4434238095 2101429.805165056 2107374.564587026 2287473.9034600104 2329825.069778027 0.9949991555611677 0.9503710728393188 0.9517046904199951 0.8377494670382496 0.8801047091290226 0.9641845959009414 0.9019689213685339 0.9045205118287293 0.9818221690257408 1.0 21.15179020641923 -7.869357001901915 4.952347985056873 0.9985192251073476 0.9215392147306727 0.28703248670602843 0.04292636639672728 0.27202520497974014 9.912790150513295 0.04384751682910347 0.011491352899829173 1.3509615793852337e-08 7.869357001901915 -0.0769800103766749 NTET(ph)SKSPEKDVPMVEK ddPTM_KYSE-520_SHP099_60min_R1 4 NTETSKSPEKDVPMVEK 17 2 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NT(0.016)ET(0.48)S(0.324)KS(0.18)PEKDVPMVEK;NT(0.003)ET(0.357)S(0.357)KS(0.284)PEKDVPMVEK;NT(0.04)ET(0.343)S(0.343)KS(0.274)PEKDVPMVEK;NT(0.01)ET(0.357)S(0.357)KS(0.276)PEKDVPMVEK 157.15 7.8217e-07 12956920000.0 2871570.0 2589880.0 2304840.0 2511170.0 2661510.0 2983260.0 2714200.0 2777150.0 3192840.0 2905580.0 True False 2712278.2877671244 2465458.2773108664 2453413.674274386 2749830.8417892074 2870955.6950795916 2964640.367755889 2988577.824039299 2767516.7148416797 2613100.740946511 2879838.821707031 0.9418160027995647 0.8561098137601535 0.8519274258620207 0.9548558138261497 0.9969154084039418 1.0294466292382958 1.0377587111864173 0.9609970856637136 0.9073774272539284 1.0 21.457556638758785 -5.448368750947397 4.072153042136365 0.9905543846164039 0.8812821821854825 0.566340367230797 0.041144994035418825 0.1723041019601788 5.4029056606029275 0.012873135600129704 0.019175164699537908 3.5614860619614657e-06 5.448368750947397 -0.1092722024309214 NTETS(ph)KSPEKDVPMVEK ddPTM_KYSE-520_SHP099_60min_R1 3 NTETSKSPEKDVPMVEK 17 2 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NTET(0.105)S(0.447)KS(0.447)PEKDVPMVEK;NT(0.001)ET(0.152)S(0.695)KS(0.152)PEKDVPMVEK;NT(0.209)ET(0.167)S(0.353)KS(0.271)PEKDVPMVEK 99.055 0.00043646 23166500000.0 9175600.0 8237000.0 6962800.0 7606500.0 7832600.0 8549100.0 8114800.0 8895700.0 9384000.0 7902000.0 True False 8666611.176894885 7841282.156010937 7411633.228873906 8329419.473022392 8448981.058602225 8495741.895772375 8935123.176816046 8864842.892971998 7680102.151389368 7831994.427662981 1.1065650335863362 1.0011858701424954 0.9463276943476442 1.0635119253408152 1.0787777157705856 1.084748204846138 1.1408490211965374 1.1318755362824247 0.9806061817744505 1.0 22.900948307812023 -5.502291940717551 23.578218176123226 1.0795605763348035 1.0144384260654167 0.11689695061863148 0.05995375234683657 619.6336983266192 709669.9415093821 0.01703634763685301 0.02488893079991989 3.145633050980422e-06 5.502291940717551 -0.06512215026938684 NTETSKS(ph)PEKDVPMVEK ddPTM_KYSE-520_SHP099_60min_R1 9 NTETSKSPEKDVPMVEK 17 2 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NT(0.088)ET(0.07)S(0.07)KS(0.773)PEKDVPMVEK;NTET(0.088)S(0.133)KS(0.779)PEKDVPMVEK;NT(0.004)ET(0.021)S(0.155)KS(0.82)PEKDVPMVEK;NT(0.002)ET(0.043)S(0.206)KS(0.749)PEKDVPMVEK;NTETS(0.001)KS(0.999)PEKDVPMVEK;NT(0.042)ET(0.205)S(0.158)KS(0.594)PEKDVPMVEK;NT(0.005)ET(0.152)S(0.12)KS(0.723)PEKDVPMVEK;NT(0.004)ET(0.07)S(0.187)KS(0.739)PEKDVPMVEK;NT(0.003)ET(0.104)S(0.104)KS(0.789)PEKDVPMVEK 145.13 6.5907e-06 43956700000.0 13768400.0 12211280.0 12801820.0 11556030.0 12226990.0 11851320.0 12707120.0 12946350.0 16426600.0 13192250.0 True False 13004639.405375063 11624631.779295042 13627045.800836215 12654311.616752885 13189184.550943334 11777351.515856046 13991679.69914016 12901442.133550819 13443943.520887958 13075376.928415187 0.994590020354488 0.8890475466166172 1.0421914316842484 0.9677970804231847 1.0087039649526908 0.9007274956840217 1.0700784976021362 0.9866975311062448 1.0281878369159523 1.0 23.640349200352375 -6.774417494520024 24.999990741748594 1.0201324022569878 0.9689505633535498 0.2352708238585266 0.04767061051889788 368.04067430008035 708956.8096412912 0.01903159398522367 0.012920443854243693 1.6810572557206863e-07 6.774417494520024 -0.05118183890343797 NTETSKS(ph)PEKDVPMVEKK ddPTM_KYSE-520_SHP099_60min_R1 4 NTETSKSPEKDVPMVEKK 18 3 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 NT(0.001)ET(0.116)S(0.116)KS(0.767)PEKDVPMVEKK;NTET(0.062)S(0.234)KS(0.703)PEKDVPMVEKK;NT(0.075)ET(0.067)S(0.053)KS(0.806)PEKDVPMVEKK;NT(0.009)ET(0.035)S(0.035)KS(0.921)PEKDVPMVEKK 116.45 0.00010322 6129330000.0 5345400.0 5626050.0 5229420.0 4396100.0 4531610.0 4573280.0 3554220.0 3880450.0 6421500.0 3851390.0 True False 5048880.006209279 5355766.113126789 5566516.780567838 4813904.022264338 4888221.925666117 4544736.463147914 3913515.2434444614 3866989.6246538414 5255517.472841741 3817269.68093608 1.322641685868833 1.4030358242369283 1.4582456168522009 1.2610856514292335 1.280554515201927 1.1905725408516181 1.025213194391018 1.013025001604175 1.3767739541925605 1.0 21.86410968241824 -6.013596047021136 1.3451312952915764 1.1071698396334688 1.3872681356175212 0.5315108593573383 0.11016615329925626 0.33352175480879187 1.2461360237151051 0.04696779203804215 0.052372234979525506 9.691789054415826e-07 6.013596047021136 0.28009829598405234 NTFTAWS(ph)DEES(ph)DYEIDDR ddPTM_KYSE-520_SHP099_60min_R1 1 NTFTAWSDEESDYEIDDR 18 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 2 NTFT(0.002)AWS(0.994)DEES(0.98)DY(0.025)EIDDR 76.807 0.0066854 0.0 33424.0 33454.0 29973.0 34785.0 35127.0 32189.0 32725.0 38844.0 39508.0 34574.0 True False 31569.90409090788 31846.81962452227 31905.10753849561 38090.9559415084 37891.29505470984 31988.096511096708 36033.1623652222 38709.25923025773 32334.343115632073 34267.701258164976 0.9212728876403902 0.9293538362726949 0.9310547940794123 1.111570211685339 1.1057437080253951 0.9334765781371137 1.0515196830320377 1.1296135372090204 0.9435807459634532 1.0 15.064561795956353 -5.22948844743335 19.523484231528276 1.0436193292478169 0.9274390268435435 0.39628508363673276 0.06326984527073505 47.042599647239726 28743.46033041541 0.017205506050706747 0.029786023077887008 5.895376590112645e-06 5.22948844743335 -0.11618030240427335 NTFTAWS(ph)DEES(ph)DYEIDDRDVNK ddPTM_KYSE-520_SHP099_60min_R1 10 NTFTAWSDEESDYEIDDRDVNK 22 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 2 NTFT(0.003)AWS(0.996)DEES(0.982)DY(0.019)EIDDRDVNK;NT(0.104)FT(0.208)AWS(0.743)DEES(0.823)DY(0.122)EIDDRDVNK;NTFTAWS(1)DEES(1)DYEIDDRDVNK;NTFTAWS(1)DEES(1)DYEIDDRDVNK;NTFTAWS(1)DEES(1)DYEIDDRDVNK;NT(0.006)FT(0.033)AWS(0.957)DEES(0.99)DY(0.013)EIDDRDVNK;NTFTAWS(1)DEES(1)DYEIDDRDVNK;NTFT(0.005)AWS(0.994)DEES(1)DYEIDDRDVNK;NTFTAWS(1)DEES(1)DYEIDDRDVNK;NTFT(0.006)AWS(0.994)DEES(1)DYEIDDRDVNK 228.84 2.6234e-20 19730800000.0 20117580.0 19043640.0 18401780.0 16647280.0 17842680.0 17381020.0 17601500.0 19217170.0 23351540.0 18237550.0 True False 19001617.733998526 18128754.94931359 19587988.182689 18229432.486012768 19246797.405038025 17272538.607017994 19380831.394085824 19150510.122591183 19111488.980419327 18075979.49559921 1.0512081925421897 1.002919645584198 1.0836473999905734 1.0084893319585209 1.0647720312873703 0.9555520137220325 1.0721870645407787 1.0594452227196638 1.0572864936626103 1.0 24.107570489819807 NTFTAWS(ph)DEESDYEIDDRDVNK ddPTM_KYSE-520_SHP099_60min_R1 4 NTFTAWSDEESDYEIDDRDVNK 22 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50 Q6PKG0 LARP1 La-related protein 1 1 NTFT(0.002)AWS(0.998)DEESDYEIDDRDVNK;NT(0.011)FT(0.035)AWS(0.907)DEES(0.027)DY(0.021)EIDDRDVNK;NTFT(0.013)AWS(0.986)DEESDYEIDDRDVNK;NTFT(0.008)AWS(0.992)DEESDYEIDDRDVNK 207.42 1.4105e-15 4739870000.0 3419720.0 3415730.0 3079440.0 2648120.0 2854030.0 2883540.0 2869790.0 2669380.0 3778580.0 2777750.0 True False 3230021.3145571915 3251633.203684746 3277945.629678212 2899796.5286136884 3078625.923790635 2865542.757265148 3159896.3796513695 2660120.5438179723 3092485.1222503013 2753141.2960568005 1.1732130563670686 1.1810629582803878 1.190620196054981 1.0532683276252242 1.1182230015582606 1.0408266227996852 1.147742175157209 0.9662128666000334 1.1232569598514712 1.0 21.392647222806307 -1.0000000000006264 0.16860167044843746 0.9939206893098929 1.8409125497009788 0.4762108919874196 0.0545815823220771 48.369496640669524 0.5197507524839191 0.1355738445459697 10.314888908249136 0.09999999999985577 1.0000000000006264 0.846991860391086 NTGIICTIGPAS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 NTGIICTIGPASR 13 0 P14618;B4DNK4;H3BUW1;H3BTJ2;H3BT25;H3BU13;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 NTGIICTIGPAS(1)R;NTGIICTIGPAS(1)R;NTGIICTIGPAS(1)R 147.64 8.2055e-05 309530000.0 850750.0 778120.0 792270.0 646600.0 771050.0 756430.0 674640.0 682970.0 894720.0 789050.0 True False 803557.2015719203 740737.9472180692 843340.9918768205 708052.6695926206 831727.24832562 751708.839786538 742839.1950519022 680600.9364763959 732261.4020557442 782059.6308716113 1.0274884035074792 0.9471630013590028 1.0783589365646078 0.9053691581081746 1.063508734492092 0.9611912060321448 0.9498498141682654 0.8702673167234845 0.9363242560412348 1.0 19.5769190894923 -6.647855413839778 3.0187327572920997 0.9270115852296124 1.0004939728679194 0.21556473690766453 0.05657100647694666 0.3442456271661484 6.28824869246412 0.022386606809509404 0.016442022484989383 2.2498034901050627e-07 6.647855413839778 0.07348238763830706 NTGNGTQSSMGS(ph)PLTRPTPR ddPTM_KYSE-520_SHP099_60min_R1 3 NTGNGTQSSMGSPLTRPTPR 20 1 E3W994;J3KR49;O75122;A0A0U1RQI6;H7C4I5;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 NTGNGTQS(0.007)S(0.226)MGS(0.767)PLTRPTPR;NTGNGTQSSMGS(1)PLTRPTPR;NT(0.001)GNGT(0.022)QS(0.105)S(0.105)MGS(0.728)PLT(0.038)RPT(0.001)PR 287.48 5.9453e-42 790380000.0 385952.0 377204.0 273494.0 273747.0 276531.0 375330.0 332257.0 350902.0 453196.0 377637.0 True False 364542.4731837629 359082.5536452533 291123.8608458722 299763.83257496305 298292.4164538378 372987.42624840525 365844.7800758325 349684.80286314234 370907.0305414597 374291.4299771404 0.97395356662595 0.9593662181022526 0.7777999642248085 0.8008835056503188 0.796952301237717 0.9965160737748797 0.9774329593872246 0.9342581070704694 0.9909578495134462 1.0 18.51380249015792 -6.274434049603534 24.76933514375393 0.9755741331251676 0.8591620189360247 0.4640551611089795 0.06331391674838485 730.6390329219145 1392677.8409001392 0.02485586131984735 0.022056828356513073 5.315767167041867e-07 6.274434049603534 -0.11641211418914288 NTGS(ph)PDRKPSK ddPTM_KYSE-520_SHP099_60min_R1 6 NTGSPDRKPSK 11 2 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 NT(0.106)GS(0.889)PDRKPS(0.004)K;NT(0.152)GS(0.842)PDRKPS(0.006)K;NT(0.053)GS(0.947)PDRKPSK;NTGS(0.999)PDRKPSK;NT(0.004)GS(0.965)PDRKPS(0.031)K;NT(0.001)GS(0.976)PDRKPS(0.023)K 142.45 6.5532e-05 14562110000.0 7884700.0 6314300.0 5734700.0 5999280.0 6401930.0 6973230.0 7179250.0 7665930.0 7729800.0 9141880.0 True False 7447319.973240228 6010951.55004247 6104367.937844423 6569449.767450696 6905725.469001013 6929707.484981664 7904998.652727929 7639338.678071511 6326263.172400845 9060890.055475011 0.8219192516015809 0.6633952639575814 0.6737051106978038 0.7250336034572153 0.7621464808336629 0.7647932424469065 0.8724306998903889 0.8431112872245334 0.6981944526054835 1.0 23.111221343166328 -6.353160540061264 1.5052176153436139 0.8407089324249742 0.7146569232640885 0.3377936887560383 0.08046823115673082 0.4873475892539883 2.209621239662581 0.036630486290409436 0.03087985209379289 4.4344469112859085e-07 6.353160540061264 -0.12605200916088577 NTGVSPASRPSPGTPT(ph)SPSNLTSGLK ddPTM_KYSE-520_SHP099_60min_R1 2 NTGVSPASRPSPGTPTSPSNLTSGLK 26 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 NTGVSPASRPSPGTPT(0.735)S(0.241)PS(0.02)NLT(0.002)S(0.001)GLK;NTGVSPASRPS(0.001)PGT(0.034)PT(0.411)S(0.411)PS(0.117)NLT(0.013)S(0.013)GLK 86.191 0.015721000000000002 1455880000.0 1143350.0 1446480.0 1058330.0 886930.0 959190.0 1349880.0 926030.0 1229690.0 1415820.0 1338760.0 True False 1079926.0962882824 1376988.9295892557 1126551.6451878722 971223.5605347722 1034672.79595545 1341454.8982074375 1019642.149581869 1225424.4924018022 1158742.7779177437 1326899.6279395197 0.8138717304226312 1.0377491263054444 0.8490104462062752 0.7319495311359306 0.7797671912548088 1.010969383035038 0.7684395474322527 0.9235246333625902 0.8732708590152377 1.0 20.339627812865267 -8.642187164296267 0.8473894216947545 1.0010948627862908 0.8614139764153997 0.1563344096161503 0.09550276608437622 4.95586854999623 4.8908741987030275 0.10810514656874791 0.03244700727648282 2.2793595435935152e-09 8.642187164296267 -0.13968088637089104 NTLETS(ph)SLNFK ddPTM_KYSE-520_SHP099_60min_R1 1 NTLETSSLNFK 11 0 Q14151;K7EQU4;K7ERX3 Q14151 SAFB2 Scaffold attachment factor B2 1 NTLET(0.12)S(0.44)S(0.44)LNFK 139.77 7.6769e-05 0.0 1243100.0 1283100.0 980100.0 894610.0 1050500.0 1073400.0 1013500.0 1181000.0 1335800.0 1208700.0 True False 1174142.7649415878 1221457.9500276344 1043278.8142154461 979633.4654256962 1133168.3734726203 1066700.512442486 1115954.4708068052 1176903.3866474733 1093252.3927776995 1197991.8583543699 0.9800924411577032 1.019587855718401 0.8708563475953447 0.8177296519956126 0.9458898786083615 0.8904071467628892 0.9315209139565807 0.9823968155043517 0.9125708035106795 1.0 20.192186672816742 -7.041000848574958 8.802273219919485 0.959992052983103 0.9187401134234129 0.10586723572095091 0.05685229475088465 1.0889177744220628 221.95699783917837 0.028731934916851824 0.016771001091786964 9.099114947398419e-08 7.041000848574958 -0.04125193955969009 NTPSMQALGES(ph)PESSSSELLNLGEGLGLDSNR ddPTM_KYSE-520_SHP099_60min_R1 1 NTPSMQALGESPESSSSELLNLGEGLGLDSNR 32 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 NT(0.004)PS(0.004)MQALGES(0.847)PES(0.036)S(0.036)S(0.036)S(0.036)ELLNLGEGLGLDSNR 71.472 0.013321000000000001 23856000.0 30402.0 47919.0 31130.0 29236.0 27040.0 37882.0 30809.0 37388.0 49721.0 40461.0 True False 28715.540455115526 45616.89931211459 33136.68960976109 32014.580649876094 29167.894163445617 37645.564386385595 33923.47438686419 37258.309754424794 40692.919764410806 40102.54701818165 0.7160527844302883 1.137506285858423 0.8262988780921474 0.7983178882718187 0.727332709072606 0.9387325041802929 0.8459181999458538 0.9290758947937312 1.0147215773093288 1.0 15.291406248494145 -7.547776646295521 2.723111706132602 1.008741086812485 0.8613441643482764 0.22376809058766378 0.11276841502805858 0.4574847156720866 6.496443976270729 0.09154235098244852 0.030535925270646205 2.832848529475505e-08 7.547776646295521 -0.14739692246420866 NTPSQHSHSIQHS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 8 NTPSQHSHSIQHSPER 16 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 NTPSQHSHSIQHS(1)PER;NTPSQHSHSIQHS(1)PER;NTPSQHSHSIQHS(1)PER;NTPSQHSHSIQHS(1)PER;NTPSQHSHSIQHS(1)PER;NTPSQHSHSIQHS(1)PER;NTPSQHSHSIQHS(1)PER;NTPSQHSHSIQHS(1)PER 260.08 4.8663e-29 3061559000.0 379279.0 792150.0 2100091.0 844875.0 320158.0 646622.0 322749.0 244796.0 370186.0 555765.0 True False 358239.63779605814 754093.9249586089 2235466.226124405 925171.6659790677 345352.6131501637 642586.1922457474 355375.6186466946 243946.85981181607 302969.5540296492 550841.3544786277 0.6503499326682409 1.3689856776863825 4.058275959037748 1.6795610178083749 0.6269547671798182 1.1665540123688722 0.645150578759756 0.44286228299382535 0.5500123612113517 1.0 19.071277348473263 -5.659274844932682 4.870389235672859 0.7298018227567531 2.092687100910347 0.336253467875695 0.8308379538207875 0.24479187429219276 9.563719912258291 0.2622247518468942 0.3396840163893347 2.1914176493369885e-06 5.659274844932682 1.3628852781535938 NTRVQVGCRELRS(ph)TK ddPTM_KYSE-520_SHP099_60min_R1 2 NTRVQVGCRELRSTK 15 3 Q6X4U4 Q6X4U4 SOSTDC1 Sclerostin domain-containing protein 1 1 NTRVQVGCRELRS(0.5)T(0.5)K;NTRVQVGCRELRS(0.5)T(0.5)K 79.81 0.051396000000000004 3192980000.0 2317000.0 2064930.0 1939670.0 1669820.0 1844270.0 2006100.0 1898550.0 1888320.0 2329300.0 2000840.0 True False 2188471.3911750102 1965727.663276882 2064704.2317817307 1828519.1907503093 1989403.55653912 1993579.1857749878 2090473.9620624164 1881769.8586572027 1906357.8368746026 1983114.1142299653 1.1035529299456297 0.991232753159122 1.0411424218940857 0.9220443632717099 1.0031714979304642 1.0052770899414862 1.0541369995110637 0.9488964075009299 0.9612950778754521 1.0 20.919336266203526 NTS(ph)FRLPSLR ddPTM_KYSE-520_SHP099_60min_R1 1 NTSFRLPSLR 10 1 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 NT(0.003)S(0.674)FRLPS(0.323)LR 80.312 0.014882 0.0 293080.0 274150.0 367010.0 304390.0 358880.0 204710.0 244400.0 325810.0 392000.0 302290.0 True False 276822.26815950463 260979.42249246058 390668.0518367623 333319.1340818097 387121.81425212143 203432.3289566813 269106.33711414196 324679.84115462564 320822.68151583936 299611.9457780613 0.9239360181071078 0.8710581342633852 1.3039134698793058 1.1125028183245977 1.2920773677658481 0.6789860411886735 0.8981829359817433 1.0836678768313648 1.0707940255275736 1.0 18.19273562083426 -6.241830172464933 24.99888299920877 0.9485464127230342 1.0998854068468704 0.17901624850399855 0.16525543918540941 1666.3577724874685 2124365.075732598 0.058321455745960156 0.05824200281718829 5.730200622922239e-07 6.241830172464933 0.15133899412383622 NTS(ph)LPPLWSPEAER ddPTM_KYSE-520_SHP099_60min_R1 1 NTSLPPLWSPEAER 14 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 NT(0.028)S(0.972)LPPLWSPEAER 93.75399999999999 0.0036019 40769000.0 153450.0 153380.0 148720.0 128600.0 156710.0 165320.0 141380.0 159580.0 174120.0 140250.0 True False 144937.82260500875 146011.39457192618 158306.7291604133 140822.10533500017 169042.1854420695 164288.17655765967 155672.0701358324 159026.45422625213 142504.19720800497 139007.49411284877 1.042661933660538 1.0503850566027146 1.1388359323411517 1.0130540531913932 1.2160652669908432 1.1818656080821628 1.119882572729892 1.1440135313650903 1.025154781168255 1.0 17.084803137443142 -1.6042386549503114 20.41877352293472 1.1016663424779483 0.2314281220182185 0.0 0.07292408556533313 0.0 0.0 0.016689848878217062 0.0 0.02487490008837202 1.6042386549503114 -0.8702382204597298 NTSAS(ph)DEDER ddPTM_KYSE-520_SHP099_60min_R1 2 NTSASDEDER 10 0 Q32MZ4-2;Q32MZ4;Q32MZ4-4;C9JTC6 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 NTS(0.008)AS(0.992)DEDER;NTS(0.001)AS(0.999)DEDER 188.09 2.0132e-07 1111740000.0 867960.0 716700.0 712680.0 726600.0 730050.0 768240.0 813200.0 667290.0 849970.0 722750.0 True False 819812.5285646373 682268.6562113677 758620.4931283171 795655.8455397437 787500.7815837077 763445.129195842 895406.1920671874 664975.3267366575 695636.8740000448 716346.9972909907 1.1444349339983586 0.9524276067206298 1.0590125958469736 1.1107128927023848 1.0993286557517505 1.0657476503467764 1.2499615346380244 0.928286611448634 0.9710892579025733 1.0 19.4502990703114 NTSLPPLWS(ph)PEAER ddPTM_KYSE-520_SHP099_60min_R1 11 NTSLPPLWSPEAER 14 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER;NTSLPPLWS(1)PEAER 310.24 2.0571000000000002e-42 18820010000.0 4249360.0 4256050.0 3400280.0 2946360.0 3187870.0 3699140.0 3251250.0 3751580.0 4487940.0 3927550.0 True False 4013639.5299108545 4051582.9695387073 3619467.489440359 3226381.1685445607 3438737.2325008623 3676052.295133687 3579918.079142204 3738566.644605352 3673043.2277607047 3892754.962587663 1.0310537314793724 1.0408009259451216 0.9297958705919576 0.8288169174665599 0.8833685309118461 0.9443317985497024 0.9196361223729571 0.9603909520470264 0.9435588068248438 1.0 21.892360103481316 -4.780554129479104 6.526924551711709 0.9198797015006945 1.036516690425533 0.5001786092944156 0.04353419973296814 0.11369877547579889 18.473957670606172 0.011987493584631564 0.027051472485346287 1.6574707405808757e-05 4.780554129479104 0.11663698892483843 NTSNIPVILEPET(ph)EES(ph)ENEFYIK ddPTM_KYSE-520_SHP099_60min_R1 4 NTSNIPVILEPETEESENEFYIK 23 0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 2 NTSNIPVILEPET(0.999)EES(0.999)ENEFY(0.002)IK;NTSNIPVILEPET(0.999)EES(0.993)ENEFY(0.008)IK;NTSNIPVILEPET(0.755)EES(0.855)ENEFY(0.39)IK;NTSNIPVILEPET(0.999)EES(0.995)ENEFY(0.005)IK 145.87 8.473e-07 220880000.0 311833.0 308336.0 294898.0 293602.0 250177.0 273033.0 277290.0 298617.0 326522.0 285258.0 True False 294535.00186632574 293523.07573822857 313907.5969334832 321505.84580534004 269864.5065875865 271328.8997705507 305321.1792896092 297581.16732473194 267233.83574978256 282730.83604736545 1.0417505426149654 1.0381714277853127 1.1102701117500136 1.1371446082785206 0.9544926558430878 0.9596721162918905 1.0799005285665382 1.0525246254882459 0.945188149569272 1.0 18.109069713766274 -5.76482631914488 24.9999998545316 1.003371578805131 1.080746541620409 0.41365180553643044 0.048325875497356736 103.97693614854205 767483.3170336552 0.015999864908381744 0.0188999864041795 1.7185955417933486e-06 5.76482631914488 0.077374962815278 NTSNIPVILEPET(ph)EESENEFYIK ddPTM_KYSE-520_SHP099_60min_R1 1 NTSNIPVILEPETEESENEFYIK 23 0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 NTSNIPVILEPET(0.555)EES(0.443)ENEFY(0.002)IK 62.684 0.032987999999999996 21476000.0 17968.0 25549.0 14443.0 11334.0 12432.0 22633.0 13633.0 17304.0 21729.0 21419.0 True False 16971.27922168002 24321.587690169155 15374.01888961707 12411.179952308637 13410.327671596006 22491.73905171493 15011.15668525818 17243.976462783958 17783.56134351446 21229.24432372985 0.7994292666701133 1.1456643166041813 0.7241905861167246 0.5846265539671394 0.6316912400224283 1.0594696028145416 0.7070980227251353 0.8122746245615913 0.8376916800395086 1.0 14.373765397527983 -8.922966246427208 14.72656198728989 0.9999986879053185 0.8109241953335431 0.10387418963426709 0.16622692065225178 0.0 0.0 0.16747780488676287 0.040619334087924064 1.1940809053913796e-09 8.922966246427208 -0.18907449257177544 NTSNIPVILEPETEES(ph)ENEFYIK ddPTM_KYSE-520_SHP099_60min_R1 1 NTSNIPVILEPETEESENEFYIK 23 0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 NTSNIPVILEPET(0.123)EES(0.587)ENEFY(0.29)IK 74.047 0.0094762 53023000.0 17784.0 19431.0 14374.0 10126.0 13730.0 20043.0 16381.0 20721.0 22896.0 14918.0 True False 16797.486068474926 18497.505593474394 15300.57103921316 11088.371995507081 14810.472886986256 19917.90420242664 18036.95134315369 20649.123687317762 18738.66356119043 14785.838126028377 1.1360523445001962 1.2510285474390628 1.0348125624531672 0.7499319214098232 1.001666105143848 1.3470933492342234 1.2198802116873029 1.3965473929386458 1.2673386115463867 1.0 13.851928403595707 -6.25410035215086 24.439500104810644 1.2693128955568254 1.0309026251711662 0.3155518758169227 0.15379916835315624 503.14251786286934 1675502.158235309 0.054422631995008186 0.053347640613840036 5.570570152476129e-07 6.25410035215086 -0.2384102703856592 NTT(ph)ADKLAIK ddPTM_KYSE-520_SHP099_60min_R1 2 NTTADKLAIK 10 1 P38432 P38432 COIL Coilin 1 NT(0.22)T(0.78)ADKLAIK;NT(0.016)T(0.984)ADKLAIK 136.33 0.0007567 1027310000.0 1346730.0 1292670.0 1228740.0 924820.0 1068090.0 1123110.0 953600.0 1042780.0 1556100.0 1140740.0 True False 1272024.2022603021 1230568.1928627735 1307946.5464535116 1012714.6147427275 1152142.6063992083 1116100.2538934995 1049999.1942391398 1039162.8395666822 1273551.4660887672 1130633.9310822906 1.1250539783842033 1.0883878141573389 1.1568258394664397 0.8957051322290622 1.019023553712322 0.9871455501296703 0.9286818353611909 0.919097517772133 1.1264047814925118 1.0 20.108700468325242 -5.249768923239121 24.99470192904603 0.9784218142262406 1.11991907789966 0.5146746942142881 0.06269559390831576 591.9642060789986 1267812.433067339 0.016582253181140684 0.028426070692454498 5.6264061194942716e-06 5.249768923239121 0.1414972636734193 NTTS(ph)SPCKGR ddPTM_KYSE-520_SHP099_60min_R1 1 NTTSSPCKGR 10 1 A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;Q7Z5J4 A0A1W2PQJ7 RAI1 Retinoic acid-induced protein 1 1 NT(0.001)T(0.042)S(0.479)S(0.479)PCKGR 100.22 0.0034533999999999997 0.0 371770.0 351130.0 347370.0 242970.0 276020.0 275340.0 222470.0 208030.0 469950.0 283780.0 True False 351147.1769948785 334261.1877431248 369762.0260116513 266061.7957484058 297741.20366103057 273621.5009278129 244959.43869796745 207308.3924845669 384618.9264754302 281265.9299774992 1.2484525837273277 1.1884169112478897 1.3146349649999618 0.9459439178065054 1.05857543316693 0.9728213472200568 0.8709175644471544 0.7370547598891598 1.367456508174307 1.0 18.10157528258413 -5.266377747623101 24.84364917085188 0.9790698970520949 1.244293033866351 0.3669743564403436 0.15397903570971674 382.14476351607755 1922472.7987213742 0.04216304479187363 0.06487406436332865 5.415296651349424e-06 5.266377747623101 0.265223136814256 NTVDLVTTCHIHS(ph)S(ph)S(ph)DDEIDFK ddPTM_KYSE-520_SHP099_60min_R1 2 NTVDLVTTCHIHSSSDDEIDFK 22 0 E9PQP7;Q5H9R7-2;Q5H9R7;Q5H9R7-5;H0YDW1 E9PQP7 PPP6R3 Serine/threonine-protein phosphatase 6 regulatory subunit 3 3 NTVDLVT(0.008)T(0.009)CHIHS(0.993)S(0.996)S(0.993)DDEIDFK;NTVDLVTTCHIHS(1)S(1)S(1)DDEIDFK 146.5 3.8074e-07 858130000.0 998660.0 1060070.0 919940.0 935990.0 1027870.0 1043500.0 994730.0 1067400.0 1148000.0 985960.0 True False 943262.3390206452 1009142.6460024901 979240.8043560424 1024946.2081843461 1108757.521219705 1036987.129433328 1095287.0160292573 1063697.4385330318 939552.1387249584 977225.1614652735 0.9652456529120642 1.0326613413119232 1.002062618698588 1.0488332153129567 1.1345978029845332 1.0611547577003095 1.120813359315226 1.0884875671212761 0.9614489840971479 1.0 19.89833148484288 -5.362424791839349 4.135259567874772 1.0700923366893818 1.0031519123723178 0.2077200602666508 0.051274988997359466 0.32544652588246614 9.705894891282387 0.01465139398504339 0.022472925692964867 4.340854290945453e-06 5.362424791839349 -0.06694042431706393 NTVVPTKK ddPTM_KYSE-520_SHP099_60min_R1 1 NTVVPTKK 8 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 122.26 0.022583000000000002 0.0 1734400.0 1570400.0 1400600.0 1133900.0 1558400.0 1652300.0 1123200.0 1487200.0 1609200.0 1450800.0 False True 1638189.3745593177 1494955.626781542 1490884.9170392356 1241665.5150805325 1681037.2139169225 1641987.382810436 1236744.0173756308 1482041.2503150883 1317009.8446308384 1437947.040705319 1.1392557084409582 1.0396458175874546 1.0368148998783364 0.863498779810062 1.1690536343343818 1.1418969797420595 0.8600761936051572 1.0306646965163202 0.915895931733925 1.0 20.455579111917267 -6.757951219679318 24.99975207284052 0.9542146042350973 1.0581595622220588 0.26931737060116123 0.09102116755125438 142.64962410396552 1022384.7531245648 0.03681582141458282 0.027346054582327854 1.7460182561429073e-07 6.757951219679318 0.10394495798696146 NVAEALGHS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 NVAEALGHSPK 11 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 NVAEALGHS(1)PK;NVAEALGHS(1)PK;NVAEALGHS(1)PK;NVAEALGHS(1)PK;NVAEALGHS(1)PK;NVAEALGHS(1)PK;NVAEALGHS(1)PK 160.8 1.3942e-05 4517360000.0 6384410.0 5367210.0 4721640.0 5575900.0 5604850.0 5455030.0 5682450.0 5946390.0 6029380.0 5471620.0 True False 6030254.050294194 5109361.17525354 5026004.469291117 6105831.859544534 6045919.807765834 5420983.134329365 6256887.50136766 5925763.360987858 4934596.58030094 5423145.70365594 1.1119476370013406 0.9421397569696743 0.9267692118068863 1.1258837938704784 1.1148363216002217 0.9996012334086622 1.1537376724268473 1.092680094689893 0.9099140701630696 1.0 22.370698501085748 -3.913582205973607 19.04485440790711 1.0371847309746367 4.421146323992331 0.07315138150028166 0.08413072970737674 796.9618365300635 179372.1633322085 0.021035755591769963 2460.1945123778146 0.00012201628388367592 3.913582205973607 3.3839615930176943 NVAEALGHS(ph)PKDPGGGGGPVR ddPTM_KYSE-520_SHP099_60min_R1 4 NVAEALGHSPKDPGGGGGPVR 21 1 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 NVAEALGHS(1)PKDPGGGGGPVR;NVAEALGHS(1)PKDPGGGGGPVR;NVAEALGHS(1)PKDPGGGGGPVR;NVAEALGHS(1)PKDPGGGGGPVR 154.14 2.707e-07 4881580000.0 2913770.0 2937660.0 2865730.0 2190440.0 2448910.0 2380730.0 2224110.0 2357340.0 3394980.0 2399890.0 True False 2752137.3696435117 2796530.404082443 3050459.5411301185 2398618.7590201995 2641625.284608118 2365870.9809830477 2448944.7440218255 2349162.937747291 2778537.212481237 2378628.8416861696 1.1570268220966193 1.1756901098113441 1.2824445275655951 1.0084039665977729 1.1105664062895642 0.9946364643026534 1.0295615276765122 0.9876122312895227 1.168125587223427 1.0 21.18169874229215 -5.271822495696658 24.958282038061704 1.0424622953722256 1.2021174505215877 0.5925814736868369 0.06167555197193739 447.0435196717176 1074574.3610350662 0.016802990527987217 0.02524066811032868 5.347828905364369e-06 5.271822495696658 0.15965515514936213 NVALLSQLYHS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 4 NVALLSQLYHSPAR 14 0 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 1 NVALLSQLY(0.001)HS(0.999)PAR;NVALLSQLYHS(1)PAR;NVALLSQLYHS(1)PAR;NVALLSQLYHS(1)PAR 228.01 1.3332e-14 5404480000.0 2249324.0 2324393.0 2126405.0 2855229.0 1837251.0 1837177.0 1943908.0 1863276.0 2444915.0 1917864.0 True False 2124549.5138037736 2212725.6712949784 2263476.468668296 3126589.1057040966 1981832.2011717686 1825710.4968767927 2140417.1913538375 1856812.7304478877 2000980.0672915785 1900873.2170356133 1.1176702868784592 1.1640574718316536 1.1907561474289998 1.644817275388819 1.0425904176094447 0.9604588462369753 1.1260178596717723 0.9768209230406028 1.0526636123644693 1.0 20.858230880766914 -5.954998188733449 24.999986677706104 1.0252080584501733 1.274632995424965 0.43576304428742796 0.1410750191652024 130.3671747347682 72422.63376115856 0.04483795289852088 0.05084145095193832 1.109179441191385e-06 5.954998188733449 0.24942493697479184 NVALLSQLYHS(ph)PARR ddPTM_KYSE-520_SHP099_60min_R1 3 NVALLSQLYHSPARR 15 1 Q15717;Q15717-2 Q15717 ELAVL1 ELAV-like protein 1 1 NVALLSQLY(0.257)HS(0.743)PARR;NVALLSQLYHS(1)PARR;NVALLSQLYHS(1)PARR 195.46 1.9690000000000002e-11 920160000.0 295334.0 347756.0 352524.0 333185.0 265791.0 246070.0 236972.0 216031.0 339543.0 211542.0 True False 278951.2342862672 331049.2797676021 375248.26109834324 364850.8022242769 286707.2395560786 244534.18585496832 260927.44238384784 215281.6388830144 277890.5503824807 209667.9024571858 1.330443196202762 1.5789220757583646 1.78972678555302 1.7401366539581777 1.3674350541787115 1.1662928993382868 1.2444796715469086 1.0267744197373032 1.3253843202787132 1.0 17.677746494144223 -6.007417013332885 3.433994393082237 1.1628258678502605 1.61917280188891 0.6865438881124671 0.1449880461599904 0.14354390147670512 3.5781553683458545 0.05009372712936207 0.05398728350502173 9.830667032366603e-07 6.007417013332885 0.45634693403864945 NVDAAVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 NVDAAVSPR 9 0 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 NVDAAVS(1)PR;NVDAAVS(1)PR;NVDAAVS(1)PR 109.15 0.0010185 900300000.0 2801220.0 2658300.0 2719410.0 2325980.0 2528080.0 2440590.0 2370690.0 2494150.0 3145640.0 2711790.0 True False 2645830.7425063755 2530591.277810352 2894707.519809841 2547040.4398686127 2727025.5131924395 2425357.372519104 2610342.480904771 2485498.375788986 2574471.0711313398 2687765.650340695 0.9843978555835016 0.94152229287162 1.0769940152494004 0.9476423063691418 1.0146068772204035 0.9023693610384786 0.9711942261684496 0.9247451969906417 0.9578480440826401 1.0 21.357975922533722 -6.241458917430739 24.991887210794733 0.9477756131465033 0.9923138135036851 0.1906931150618869 0.042749390236340314 1287.1196514677536 1609952.1682595112 0.013409853259101729 0.013393154914230649 5.735101158069363e-07 6.241458917430739 0.04453820035718181 NVDVYDKR ddPTM_KYSE-520_SHP099_60min_R1 1 NVDVYDKR 8 1 H0Y3P2;D3DQV9;P78344-2;P78344;H0YCH5;H0YEC5;H0YD77 H0Y3P2 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 0 122.13 0.0022517 665980000.0 845820.0 787150.0 559180.0 458330.0 770990.0 804760.0 614530.0 613390.0 641920.0 679440.0 False True 798900.6784996323 749334.1324637618 595225.6375196343 501889.54539806093 831662.5266669733 799737.1943294358 676652.689634836 611262.2932563015 525363.5094863457 673420.6901963218 1.186332243915359 1.1127281109306413 0.8838837983224256 0.7452838213981003 1.2349821423284741 1.1875744329986193 1.0047993765050076 0.907697524229766 0.7801416219231204 1.0 19.36114852168653 -7.230586844685609 3.7596102226123906 0.8791757392227701 1.0494672265659344 0.18805031998071042 0.14885145026353092 0.4172899809800238 12.841573956544279 0.08809718255066289 0.04468661856844544 5.880485119245834e-08 7.230586844685609 0.17029148734316424 NVFEVGPGDS(ph)PTFPR ddPTM_KYSE-520_SHP099_60min_R1 8 NVFEVGPGDSPTFPR 15 0 Q16584;Q16584-2 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 NVFEVGPGDS(0.894)PT(0.106)FPR;NVFEVGPGDS(0.962)PT(0.038)FPR;NVFEVGPGDS(0.992)PT(0.008)FPR;NVFEVGPGDS(0.999)PT(0.001)FPR;NVFEVGPGDS(0.975)PT(0.025)FPR;NVFEVGPGDS(0.998)PT(0.002)FPR;NVFEVGPGDS(0.972)PT(0.028)FPR;NVFEVGPGDS(0.999)PT(0.001)FPR 237.46 1.1104e-18 3382956000.0 2465890.0 2609270.0 2181740.0 1993040.0 2029930.0 2208220.0 1879700.0 2010090.0 2594820.0 2091930.0 True False 2329102.1660701525 2483916.7526058825 2322378.451307426 2182457.922370672 2189673.942278224 2194437.679882384 2069718.4201041465 2003117.4669485304 2123666.0980891087 2073397.127696914 1.123326609725398 1.1979937270217815 1.120083760262114 1.052600051006582 1.0560803393754423 1.0583778913207618 0.9982257583250086 0.9661041004593034 1.0242447381259916 1.0 20.983565038539 -5.49872148062478 0.7323955872715796 0.9957782078682395 1.1777827510631675 0.8072857619903566 0.029200544768552873 0.3591252949574044 0.3785702197885623 0.016360234794193282 0.041477926992103134 3.1716008047473043e-06 5.49872148062478 0.1820045431949281 NVFIWDFLEKAQT(ph)Y(ph)Y(ph)ETLEK ddPTM_KYSE-520_SHP099_60min_R1 2 NVFIWDFLEKAQTYYETLEK 20 1 Q6IQ26-2;Q6IQ26;H0YDS8;H0YEA8 Q6IQ26-2 DENND5A DENN domain-containing protein 5A 3 NVFIWDFLEKAQT(0.956)Y(0.953)Y(0.953)ET(0.138)LEK;NVFIWDFLEKAQT(0.997)Y(0.998)Y(0.998)ET(0.008)LEK 57.278 0.017679 66485000.0 49211.0 65924.0 46474.0 45351.0 46088.0 74905.0 57121.0 83353.0 95015.0 90628.0 True False 46481.167730303605 62756.912086058626 49469.788401029116 49661.145404724666 49714.86339515093 74437.49011040099 62895.348127237776 83063.86789773652 77762.67113323326 89825.106427517 0.5174629853381901 0.6986566961287083 0.5507345370188679 0.5528648657354831 0.5534628944221467 0.8286935921469482 0.7001978692670987 0.9247288558991426 0.865711984388047 1.0 16.454831119126847 -6.940804672695838 0.7947928923206168 0.9720171632579331 0.5716560318791696 0.7919045586333429 0.0762703300388735 0.28763187959983544 0.34407377263020644 0.06471211245901518 0.03460315247628372 1.1460282606315773e-07 6.940804672695838 -0.4003611313787635 NVIPDT(ph)PPSTPLVPSR ddPTM_KYSE-520_SHP099_60min_R1 3 NVIPDTPPSTPLVPSR 16 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 NVIPDT(0.97)PPS(0.018)T(0.012)PLVPSR;NVIPDT(0.977)PPS(0.014)T(0.009)PLVPSR;NVIPDT(0.948)PPS(0.026)T(0.026)PLVPSR 104.95 0.0031536 1016200000.0 1171600.0 1281870.0 911500.0 713740.0 913930.0 1398850.0 1149790.0 1421300.0 1719030.0 1664260.0 True False 1106609.0124733031 1220287.0410739013 970256.7484515661 781573.635006244 985851.0914496233 1390119.2582729391 1266021.9940690252 1416369.8420339143 1406897.4852198304 1649515.9511746855 0.670868936844923 0.7397849291514197 0.5882069511122993 0.4738199921314216 0.5976608415017508 0.8427437499364466 0.767511216346493 0.8586578632508897 0.8529153563006912 1.0 20.65361129846639 -6.264771707985465 22.978779130593207 0.8494783914192823 0.6118242522754379 0.6920779407742572 0.08317485773913574 62.54110557976866 431261.9241539047 0.0306859949290529 0.028215667219748795 5.435359725025471e-07 6.264771707985465 -0.23765413914384437 NVMSAFGLTDDQVSGPPS(ph)APAEDR ddPTM_KYSE-520_SHP099_60min_R1 4 NVMSAFGLTDDQVSGPPSAPAEDR 24 0 Q92734-4;Q92734-3;Q92734-2;Q92734 Q92734-4 TFG Protein TFG 1 NVMSAFGLTDDQVSGPPS(1)APAEDR;NVMSAFGLTDDQVSGPPS(1)APAEDR;NVMSAFGLTDDQVS(0.01)GPPS(0.989)APAEDR;NVMSAFGLTDDQVSGPPS(1)APAEDR 233.49 1.8165e-28 299258000.0 179749.0 198908.0 153611.0 136109.0 136464.0 171774.0 134446.0 199127.0 210576.0 192485.0 True False 169777.96464925227 189352.16111300522 163513.01084629013 149044.75843733695 147202.94042605197 170701.89474966997 148037.11374651358 198436.27491359104 172340.70658897786 190779.732651064 0.8899161472239614 0.9925171740298546 0.8570774713546502 0.7812400005295096 0.7715858408046207 0.8947590625985603 0.7759582828290957 1.040132891246529 0.9033491356452884 1.0 17.54154839024108 -7.265909367109603 24.9673400840805 0.9788057586646657 0.8533208264447787 0.4112627139983641 0.07085987747440231 424.5675909984569 2371421.380067814 0.03947942909318458 0.019989120410005203 5.4211401233949746e-08 7.265909367109603 -0.125484932219887 NVNIFK ddPTM_KYSE-520_SHP099_60min_R1 1 NVNIFK 6 0 P00338;P00338-3;P00338-5;P00338-2;F5GYU2;F5GXY2 P00338 LDHA L-lactate dehydrogenase A chain 0 119.7 0.061901 2055100000.0 2229700.0 2484900.0 1741400.0 1452200.0 2289700.0 2267900.0 1895900.0 1949800.0 2015300.0 1694400.0 False True 2106014.0962032476 2365521.6740890574 1853653.4303385152 1590216.651380148 2469886.3633891027 2253745.19486521 2087556.0742009068 1943036.5988867395 1649372.3215787509 1679388.9342232535 1.2540359491991744 1.408560950881311 1.1037666097257346 0.9469019468772735 1.470705393525454 1.342003123241732 1.2430450336189918 1.156990235728466 0.9821264675306522 1.0 20.679504955939326 -7.601292798925024 2.694936218350159 0.9859369574496069 1.2524042218276743 0.35289002175459927 0.14014457325993024 0.34170411340616486 4.673803296766763 0.12709805732795232 0.040239266271173475 2.5044202175408216e-08 7.601292798925024 0.26646726437806745 NVNVFK ddPTM_KYSE-520_SHP099_60min_R1 2 NVNVFK 6 0 A0A5F9ZHM4;P07195;C9J7H8;A8MW50;A0A3B3IS95 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 ; 119.7 0.061901 4039100000.0 7254500.0 7168800.0 5059500.0 4482800.0 6400900.0 7010000.0 5420000.0 6057300.0 5592900.0 5775100.0 False True 6852078.423512784 6824400.087411821 5385643.4654862285 4908843.964197034 6904614.413860906 6966247.9897725275 5967906.49410249 6036288.640084444 4577370.345535556 5723937.106959809 1.1970918435112177 1.1922563018929655 0.9408984349142753 0.8575992140494185 1.2062701397374713 1.217037828962547 1.0426226533562075 1.0545693510057688 0.7996891405340343 1.0 22.448576389541152 -7.622243500343443 6.564885984961797 0.9018596946764024 1.0883994810281774 0.27830821375737147 0.12262038554570252 0.3032857502138114 16.970737533349933 0.09131035689361222 0.03359244045698364 2.3864728595088256e-08 7.622243500343443 0.18653978635177504 NVPHEDICEDS(ph)DIDGDYR ddPTM_KYSE-520_SHP099_60min_R1 8 NVPHEDICEDSDIDGDYR 18 0 O00629 O00629 KPNA4 Importin subunit alpha-3 1 NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR;NVPHEDICEDS(1)DIDGDYR 256.75 4.4132999999999995e-26 4429010000.0 2223730.0 2120890.0 2024750.0 1789234.0 1935338.0 1961554.0 1863049.0 2049370.0 2170300.0 2107557.0 True False 2100375.2640041485 2018999.2608792076 2155268.624714545 1959282.2614071819 2087638.090033082 1949311.2138844908 2051384.174526044 2042261.213796554 1776228.2288107816 2088885.6846345358 1.0055003389865362 0.9665436819882486 1.031779115807203 0.9379557128565277 0.9994027463491033 0.933182331720338 0.9820471218773023 0.9776797403606415 0.8503233287854832 1.0 20.994302111646142 -6.0360828584817465 0.7232727959304801 0.9435667308494233 0.9967120407973256 0.15579861588160238 0.04476576759053018 1.3743856364114069 1.6008186128577253 0.028857902593066417 0.03691621783979322 9.202739771227216e-07 6.0360828584817465 0.05314530994790223 NVPPPKS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 2 NVPPPKSPLR 10 1 A0A2R8YFA9;Q6ZW33 A0A2R8YFA9 MICALCL MICAL C-terminal-like protein 1 NVPPPKS(1)PLR;NVPPPKS(1)PLR 87.719 0.0062868 262390000.0 592050.0 516170.0 445650.0 447240.0 536270.0 618310.0 579710.0 674690.0 815680.0 644290.0 True False 559207.8062775858 491372.4184130345 474377.3120652109 489745.5551323906 578471.3980410866 614450.8979395515 638312.7442243842 672349.657863829 667573.0736194892 638582.0918500343 0.8757022995391345 0.7694741595234544 0.742860343438216 0.7669265414467702 0.9058684943155841 0.9622112893260562 0.9995782098666911 1.0528789742849927 1.045398989635718 1.0 19.28451256952864 -6.154756192637505 1.6002439578231828 1.0280305911077496 0.7830182513287256 0.8766607221740783 0.03956237237135021 0.12547293487242103 0.6419511368214253 0.017318778485060925 0.017064277224576232 7.00234988639959e-07 6.154756192637505 -0.24501233977902404 NVPQEESLEDS(ph)DVDADFK ddPTM_KYSE-520_SHP099_60min_R1 11 NVPQEESLEDSDVDADFK 18 0 O00505 O00505 KPNA3 Importin subunit alpha-4 1 NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEES(0.017)LEDS(0.983)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK;NVPQEESLEDS(1)DVDADFK 380.52 1.8729999999999996e-86 18869220000.0 10044220.0 9014410.0 8366780.0 7980620.0 8673990.0 8923460.0 8189510.0 8998060.0 10178910.0 8569080.0 True False 9487047.093943827 8581344.212694736 8906116.026121318 8739095.7253391 9356583.664747983 8867765.376150575 9017385.592715373 8966847.830022985 8330676.53343978 8493164.617843367 1.1170214544072774 1.0103824191357498 1.0486216183082544 1.028956357089683 1.1016604629434181 1.0441061459612129 1.0617226909473372 1.0557722867144776 0.9808683698344649 1.0 23.01787078244037 -7.755889668459328 24.93798265923661 0.9904341734615445 1.0566726741847008 0.4506979568502141 0.030014861892922722 104.37976194562377 469055.0441716017 0.020561974151053885 0.0072776996597414875 1.7543261278587827e-08 7.755889668459328 0.06623850072315629 NVRS(ph)DIS(ph)DQEEDEESEGCPVSINLSK ddPTM_KYSE-520_SHP099_60min_R1 3 NVRSDISDQEEDEESEGCPVSINLSK 26 1 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154;H0YBA1 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 2 NVRS(1)DIS(1)DQEEDEESEGCPVSINLSK;NVRS(1)DIS(0.999)DQEEDEES(0.001)EGCPVSINLSK;NVRS(1)DIS(1)DQEEDEESEGCPVSINLSK 150.19 5.814899999999999e-07 1878740000.0 984740.0 873500.0 913010.0 803540.0 910170.0 895330.0 734670.0 807410.0 1056440.0 885550.0 True False 930114.5091694787 831535.7488497698 971864.0854676499 879908.2000068907 981795.2008410972 889741.9133641985 808937.6132882432 804609.2831609098 864617.1266851869 877704.7159474739 1.0597123295223827 0.9473980642249767 1.1072790971830793 1.002510507257601 1.1185939678827619 1.0137144043982156 0.9216512097864288 0.9167197903139231 0.9850888470524405 1.0 19.743376133457033 -6.596654232627378 5.590467612881463 0.9498527353914356 1.0446375384271767 0.408119910007687 0.05153334847446344 0.19421876960568601 10.734603029387854 0.019357067889697585 0.014913502287618442 2.5313125211327475e-07 6.596654232627378 0.0947848030357411 NVS(ph)ES(ph)PNR ddPTM_KYSE-520_SHP099_60min_R1 5 NVSESPNR 8 0 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 NVS(1)ES(1)PNR;NVS(1)ES(1)PNR;NVS(1)ES(1)PNR;NVS(1)ES(1)PNR;NVS(1)ES(1)PNR 115.33 0.0010863 3251520000.0 6807490.0 5386080.0 5335230.0 6234410.0 5716870.0 6234960.0 7144170.0 5691280.0 7032980.0 6019370.0 True False 6429864.959305128 5127324.632129104 5679147.462469823 6826926.451956281 6166755.144459219 6196045.301899019 7866372.423980113 5671538.278034741 5755968.118998126 5966043.0647990005 1.077743638366069 0.8594179720863021 0.951911912265279 1.1442972130450562 1.0336424121449046 1.0385518901895099 1.3185242443846046 0.9506364966585803 0.9647882283920537 1.0 22.508342960867182 -5.234178732881719 23.07373209647975 1.0705281814522285 0.9526637618961494 0.144457631171948 0.11144346600526249 498.01696509097167 421524.5920827453 0.03054352131173828 0.05287712850159062 5.8320503820375255e-06 5.234178732881719 -0.11786441955607907 NVS(ph)ES(ph)PNRK ddPTM_KYSE-520_SHP099_60min_R1 9 NVSESPNRK 9 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 NVS(1)ES(1)PNRK;NVS(1)ES(1)PNRK;NVS(1)ES(1)PNRK;NVS(1)ES(1)PNRK;NVS(1)ES(1)PNRK;NVS(1)ES(1)PNRK;NVS(1)ES(1)PNRK;NVS(1)ES(1)PNRK;NVS(1)ES(1)PNRK 104.81 0.0019361 17600620000.0 25663960.0 19464950.0 18795590.0 22343480.0 20175200.0 21357700.0 24166520.0 20091530.0 23888870.0 21449450.0 True False 24240328.978964105 18529824.584514383 20007183.805407297 24466997.62138777 21762873.458814617 21224398.67206344 26609507.68410659 20021837.17182835 19551253.397406317 21259424.56041958 1.1402156681180504 0.8716051806506975 0.9410971472227107 1.1508776990577623 1.0236812100423616 0.9983524536020908 1.2516570055074632 0.9417864117124152 0.919651110115487 1.0 24.34159921145382 -3.9179272528488367 19.180311385285616 1.0180998606762302 5.7212460210603995 0.11177591339913184 0.10762602794710377 641.961728923731 151044.45584729002 0.026670041647732453 881.5266573900691 0.00012080161687276135 3.9179272528488367 4.703146160384169 NVS(ph)ES(ph)PNRKNEK ddPTM_KYSE-520_SHP099_60min_R1 8 NVSESPNRKNEK 12 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 NVS(1)ES(1)PNRKNEK;NVS(1)ES(1)PNRKNEK;NVS(1)ES(1)PNRKNEK;NVS(1)ES(1)PNRKNEK;NVS(1)ES(1)PNRKNEK;NVS(1)ES(1)PNRKNEK;NVS(1)ES(1)PNRKNEK;NVS(1)ES(1)PNRKNEK 139.67 2.864e-05 14866020000.0 21492450.0 23227760.0 23672350.0 16858870.0 18769860.0 17610910.0 13843100.0 15014610.0 30299400.0 16785100.0 True False 20300220.95436313 22111863.544021435 25198307.558099203 18461131.935995918 20246941.19610546 17500993.778254643 15242495.643636595 14962527.822346313 24797792.745716885 16636397.072610177 1.220229408192294 1.3291257384344326 1.5146493226941053 1.109683295933706 1.2170268062091167 1.0519701893307127 0.9162137437036489 0.8993851106728098 1.4905747102263784 1.0 23.987839688538376 -5.376142384914445 7.175838215610838 1.0872618342859481 1.3513793434780708 0.3169812768592948 0.17246420776854723 0.3053009935999415 17.102838429144267 0.04924993797337317 0.0732390812925318 4.205887143456819e-06 5.376142384914445 0.2641175091921226 NVS(ph)PEFVPCEGEGGFGLHK ddPTM_KYSE-520_SHP099_60min_R1 14 NVSPEFVPCEGEGGFGLHK 19 0 O94986-3;O94986 O94986-3 CEP152 Centrosomal protein of 152 kDa 1 NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK;NVS(1)PEFVPCEGEGGFGLHK 255.42 2.3771e-27 17298170000.0 22096480.0 20650970.0 20533470.0 18605840.0 19707190.0 20283030.0 18987290.0 20042970.0 24394230.0 20080870.0 True False 20870744.2061592 19658866.40346209 21857090.330913622 20374133.43955023 21258033.734427266 20156436.086162027 20906710.5712929 19973445.615134373 19964852.760495238 19902969.114480462 1.048624659271296 0.9877353620148677 1.0981823970681557 1.0236730671870946 1.068083541312483 1.0127351336488362 1.0504317446828655 1.0035410043721886 1.0031092670474855 1.0 24.246480331523866 -7.272285668040755 23.15127620392643 1.0024938348993961 1.0407233539735103 0.28412427651353944 0.028453962437455817 358.4473636944881 765092.0005312667 0.014530162647906457 0.007115881129179638 5.34212851959408e-08 7.272285668040755 0.038229519074114204 NVS(ph)PSQR ddPTM_KYSE-520_SHP099_60min_R1 1 NVSPSQR 7 0 D6REZ3;Q14094-2 D6REZ3 CCNI 1 NVS(0.988)PS(0.012)QR 76.679 0.026507 446690000.0 180490.0 150590.0 173010.0 151720.0 188890.0 151640.0 143710.0 158140.0 199250.0 160960.0 True False 170477.8599021054 143355.4303598018 184162.50142578757 166139.4231837187 203754.56836291548 150693.55851199816 158237.60927444106 157591.4492501534 163071.22268375245 159534.01962498494 1.0685987872859095 0.8985884684457021 1.1543776171295412 1.0414043573543814 1.2771856989617598 0.9445857307816353 0.9918737686570467 0.9878234725145275 1.0221720926175017 1.0 17.283504576865152 NVS(ph)SYEK ddPTM_KYSE-520_SHP099_60min_R1 1 NVSSYEK 7 0 A0A0U1RR22;Q9UNF0 A0A0U1RR22 PACSIN2 Protein kinase C and casein kinase substrate in neurons protein 2 1 NVS(0.5)S(0.5)YEK 79.311 0.030024000000000002 0.0 610300.0 528670.0 459420.0 508060.0 532810.0 526140.0 461600.0 549240.0 651880.0 521830.0 True False 576445.4423971117 503271.89965015184 489034.9482979905 556345.8696461916 574739.1157257939 522856.16509827645 508263.0327818658 547334.8146335802 533515.024557514 517206.9921775964 1.1145352849351546 0.9730570298967274 0.9455304272647337 1.0756735273508364 1.1112361673726994 1.0109224604580371 0.9827071955116581 1.0582509960453872 1.0315309588357573 1.0 18.980382253668033 -4.238443957263667 23.55283771752062 1.023470223171941 1.1145355080811459 0.2563272232133723 0.047632708694875577 4525.202045254277 4634739.725513462 0.012810628116436535 0.6161554108965749 5.7750539103176076e-05 4.238443957263667 0.09106528490920485 NVS(ph)TGS(ph)AENEEK ddPTM_KYSE-520_SHP099_60min_R1 2 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 NVS(0.96)T(0.04)GS(1)AENEEK;NVS(0.942)T(0.058)GS(1)AENEEK 191.37 1.0559000000000002e-05 0.0 2015600.0 1875650.0 1568800.0 1866240.0 1789720.0 1897330.0 1875440.0 1999090.0 2068800.0 1818360.0 True False 1903790.6500010143 1785540.958591951 1669927.3581687491 2043606.8884944825 1930560.7818861639 1885488.05969117 2065027.7777305532 1992155.6233811132 1693158.0702040016 1802250.7450626716 1.0563406092168444 0.990728378658465 0.9265788141542308 1.1339192918038816 1.071194331407548 1.0461852019517983 1.1458049238641006 1.1053709528702889 0.9394686476576397 1.0 20.78136831493314 -5.261994245765211 24.999893096999774 1.0705993928158202 0.9911671810865722 0.19930536309158908 0.06486118060678032 73.08558406841756 3292928.4800010184 0.017916376222393483 0.02853817403737144 5.470232106930285e-06 5.261994245765211 -0.07943221172924797 NVS(ph)TGS(ph)AENEEKSEVQAIIESTPELDMDKDLSGYK ddPTM_KYSE-520_SHP099_60min_R1 2 NVSTGSAENEEKSEVQAIIESTPELDMDKDLSGYK 35 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 NVS(0.999)T(0.011)GS(0.99)AENEEKSEVQAIIESTPELDMDKDLSGYK;NVS(0.834)T(0.353)GS(0.808)AENEEKS(0.005)EVQAIIESTPELDMDKDLSGYK 214.37 1.2668999999999998e-22 332578000.0 97926.0 110879.0 98685.0 103819.0 91540.0 102410.0 75359.0 83137.0 138048.0 100383.0 True False 92493.84956935876 105552.20640722782 105046.39300158269 113685.92654567937 98743.67720864683 101770.8212029394 82977.0231529649 82848.61715132177 112981.96310688402 99493.68471679225 0.9296454325984764 1.0608935301540101 1.055809655664037 1.1426446499522576 0.9924617576454192 1.0228872464883474 0.8339928648653243 0.8327022703717276 1.1355691914364818 1.0 16.602317334181443 -6.551068810779351 24.291585312237462 0.9354552848182546 1.040953127318731 0.14872583044517185 0.09527051917237188 248.40526528557544 214049.93711905516 0.0363854712239398 0.0281846306346527 2.8114553406034104e-07 6.551068810779351 0.10549784250047634 NVSEELDRT(ph)PPEVSK ddPTM_KYSE-520_SHP099_60min_R1 2 NVSEELDRTPPEVSK 15 1 Q15393;Q15393-3 Q15393 SF3B3 Splicing factor 3B subunit 3 1 NVSEELDRT(1)PPEVSK;NVSEELDRT(1)PPEVSK 129.46 0.00014221 2277300000.0 2771200.0 2882600.0 2328400.0 2156300.0 2317800.0 3045800.0 2285400.0 2675000.0 3185700.0 2800100.0 True False 2617476.011749759 2744115.569129188 2478492.3895717193 2361234.1036847676 2500197.6735219737 3026790.032417854 2516430.5353545835 2665721.0493496936 2607257.184961756 2775293.292444835 0.9431349179833709 0.9887659717261157 0.8930560226981793 0.850805250065909 0.9008769200459813 1.09061987814321 0.9067259817926444 0.9605186798118133 0.9394528470412398 1.0 21.404208812569504 NVSES(ph)PNR ddPTM_KYSE-520_SHP099_60min_R1 1 NVSESPNR 8 0 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 NVS(0.002)ES(0.998)PNR 113.67 0.0026612 0.0 317170.0 307410.0 297450.0 254320.0 312620.0 295620.0 285420.0 284600.0 343220.0 311740.0 True False 299575.94783728046 292641.562168183 316624.1029368271 278490.4963359041 337221.41543551616 293774.9259253289 314273.0390307632 283612.7890261395 280899.8998721078 308978.2261300499 0.9695697706258045 0.9471268115993688 1.024745681605276 0.901327254751882 1.0914083482814048 0.9507949139486551 1.0171365243662338 0.9179054219398811 0.909125226687903 1.0 18.23714564861494 -7.271770379503566 24.851280296646728 0.9351364921631361 0.9854511898255036 0.11728542667898445 0.05380946032984996 1267.8764706923089 3049866.9607874434 0.027274393098309962 0.013326209480505492 5.348470693871753e-08 7.271770379503566 0.050314697662367514 NVSES(ph)PNRK ddPTM_KYSE-520_SHP099_60min_R1 10 NVSESPNRK 9 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 NVS(0.055)ES(0.945)PNRK;NVS(0.096)ES(0.904)PNRK;NVS(0.035)ES(0.965)PNRK;NVS(0.006)ES(0.994)PNRK;NVS(0.004)ES(0.996)PNRK;NVS(0.002)ES(0.998)PNRK;NVS(0.002)ES(0.998)PNRK;NVSES(1)PNRK;NVS(0.023)ES(0.977)PNRK;NVS(0.001)ES(0.999)PNRK 142.51 0.00029425 15846650000.0 18225440.0 14724620.0 13565720.0 14190980.0 15080790.0 15446340.0 15132510.0 13993490.0 17055390.0 14994150.0 True False 17214438.51168612 14017227.153094769 14440188.017119449 15539686.472526303 16267562.375042498 15349933.662531104 16662251.789865503 13944949.849295123 13958561.107393945 14861313.496272173 1.1583389662026986 0.9432024401215184 0.9716629704865347 1.0456469057344289 1.0946248041347806 1.0328786662350873 1.1211829825166584 0.9383389868461551 0.939254872114455 1.0 23.825058296293516 -7.2888851943724795 24.5528400405831 0.9540976719307478 1.045793430875976 0.31173883078288467 0.06284688463753309 782.0959371699591 699652.6204284169 0.03477939869735411 0.016714154890753542 5.141795568436094e-08 7.2888851943724795 0.09169575894522819 NVSES(ph)PNRKNEK ddPTM_KYSE-520_SHP099_60min_R1 1 NVSESPNRKNEK 12 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 NVS(0.001)ES(0.999)PNRKNEK 93.42399999999999 0.0017589000000000003 375780000.0 130210.0 163210.0 155720.0 70114.0 96686.0 90011.0 66913.0 42143.0 200770.0 79842.0 True False 122986.99173280035 155369.14661679536 165757.9603608094 76777.61347945727 104294.63813191216 89449.20796111492 73677.21904794844 41996.81576925016 164315.22899983413 79134.66199613613 1.5541481903189955 1.9633513645939562 2.094631558152138 0.9702147142955644 1.3179387578227668 1.1303416948376228 0.9310359985052549 0.5307006400216977 2.0764002126888097 1.0 16.272022131599577 -5.264590982532771 24.968778770567752 1.115829701083378 1.8799744848104505 0.4237793746130437 0.39167482033997975 240.4304946924843 1904830.4843355147 0.10599995423546434 0.16500196330930392 5.43762204311343e-06 5.264590982532771 0.7641447837270725 NVSGIS(ph)FTENMGSSQQK ddPTM_KYSE-520_SHP099_60min_R1 1 NVSGISFTENMGSSQQK 17 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 NVSGIS(0.999)FT(0.001)ENMGSSQQK 155.49 8.1821e-06 0.0 91936.0 124060.0 115260.0 82778.0 81386.0 116010.0 94391.0 114880.0 128620.0 127680.0 True False 86836.12681012771 118099.97138214346 122689.84402252053 90645.1962318868 87790.61517700394 115285.93855827561 103932.96344738548 114481.50809319351 105265.85024634493 126548.85453353675 0.6861865888095829 0.9332361941754735 0.9695057649850671 0.7162861850153285 0.6937290384855955 0.9109994632762451 0.8212872714690765 0.9046427841261473 0.8318198583018259 1.0 16.94933492328197 -8.759912322130772 0.5466006814006994 1.009434647261175 0.820848146847176 0.23304618524321008 0.09617494864343973 4.646383910001697 2.0329403061755458 0.20669070004471043 0.046773100815619105 1.7381517013980574e-09 8.759912322130772 -0.18858650041399905 NVSHNPLLLLT(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 2 NVSHNPLLLLTPQK 14 0 P47712 P47712 PLA2G4A Cytosolic phospholipase A2;Phospholipase A2;Lysophospholipase 1 NVSHNPLLLLT(1)PQK;NVSHNPLLLLT(1)PQK 143.46 0.00016454 662770000.0 1163180.0 1234280.0 822530.0 813750.0 870590.0 1288940.0 894670.0 1113910.0 1308940.0 1220270.0 True False 1098656.0866581579 1174983.3361079486 875551.5998945328 891088.5553371403 939100.4800204927 1280895.247351984 985111.974737764 1110046.1061985483 1071269.4916922015 1209459.3571556953 0.9083861149678355 0.9714946840968476 0.723919819805753 0.7367660186884886 0.77646303239903 1.0590643164432458 0.8145060591820691 0.9178035620883213 0.8857424479409732 1.0 20.205930858927164 -6.2099222395474545 24.999971822733812 0.9227292845101257 0.8212927460461558 0.2610707429655049 0.09297550550906956 580.7054288022531 281801.498996986 0.03239159772198327 0.032391560375076844 6.167054131171315e-07 6.2099222395474545 -0.10143653846396994 NVSS(ph)FPDDATSPLQENR ddPTM_KYSE-520_SHP099_60min_R1 1 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVS(0.116)S(0.884)FPDDATSPLQENR 100.48 0.00088789 177970000.0 138540.0 170660.0 144260.0 130310.0 140370.0 163870.0 144060.0 140690.0 152520.0 160010.0 True False 130854.9100273571 162461.2374341177 153559.23042416113 142694.6232208698 151416.320403952 162847.22654550974 158622.99069011168 140201.9792272929 124826.21271631586 158592.4358858961 0.8251018360138213 1.0243946158378268 0.9682632690921259 0.8997568038083201 0.954751212175673 1.026828458973131 1.0001926624308715 0.8840395094767651 0.7870880601526651 1.0 17.27496443734412 -7.346690370847146 7.276026067435899 0.8754967469056726 0.9603660024999386 0.13445542355581375 0.0745139708347421 0.4479294243381323 33.31827554854965 0.039895326167031904 0.0189821331885851 4.501006386410575e-08 7.346690370847146 0.08486925559426606 NVSSFPDDATS(ph)PLQENR ddPTM_KYSE-520_SHP099_60min_R1 8 NVSSFPDDATSPLQENR 17 0 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 NVSSFPDDATS(1)PLQENR;NVSSFPDDAT(0.213)S(0.787)PLQENR;NVSSFPDDATS(1)PLQENR;NVSSFPDDAT(0.001)S(0.999)PLQENR;NVSSFPDDATS(1)PLQENR;NVSSFPDDAT(0.001)S(0.999)PLQENR;NVSSFPDDAT(0.064)S(0.936)PLQENR;NVSSFPDDAT(0.002)S(0.998)PLQENR 503.48 8.828999999999997e-178 15449840000.0 5722860.0 6344790.0 5129560.0 4228140.0 4451540.0 5692890.0 4532600.0 5662550.0 6670420.0 5847880.0 True False 5405401.547561422 6039976.764676043 5460219.645186189 4629981.1543633565 4801850.872202094 5657358.561839674 4990799.441913093 5642907.93569911 5459239.875604291 5796072.33278179 0.9325973240515327 1.0420809848273913 0.9420551248651498 0.7988135565832777 0.828466346950759 0.9760676259753402 0.8610657623587298 0.9735744503710896 0.9418860846038066 1.0 22.46664416861764 -9.325429988831127 11.752821771428428 1.0000065524947863 0.9209395774615778 0.10157912937001501 0.0696823039454444 0.0 0.0 0.07260919817507214 0.01761031726277809 4.726830304158125e-10 9.325429988831127 -0.07906697503320848 NVSTGS(ph)AENEEK ddPTM_KYSE-520_SHP099_60min_R1 4 NVSTGSAENEEK 12 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 NVSTGS(1)AENEEK;NVST(0.015)GS(0.984)AENEEK;NVSTGS(1)AENEEK;NVSTGS(1)AENEEK 257.48 1.8289e-21 2286230000.0 5043390.0 4288200.0 4000680.0 4398430.0 4264690.0 4527850.0 4967700.0 4988480.0 4916500.0 4361430.0 True False 4763623.102951285 4082188.435280575 4258570.234114326 4816455.464763798 4600296.840233168 4499590.008629316 5469883.596079884 4971176.127199986 4023787.534879143 4322791.1233411925 1.1019785520585974 0.9443408942982539 0.9851436520075879 1.114200369006273 1.0641959578832216 1.040899243161088 1.2653592181553466 1.1499922122902946 0.9308308960737056 1.0 22.043531696420775 -5.260213968200819 24.83930559759409 1.0923700139838293 1.0038730165979761 0.0983509048241713 0.09236440426346001 190.91192363889536 3869739.077292677 0.025939383106938427 0.04194100121197807 5.492701927506756e-06 5.260213968200819 -0.08849699738585315 NVT(ph)AYFPR ddPTM_KYSE-520_SHP099_60min_R1 1 NVTAYFPR 8 0 A0A0J9YX77;A0A0J9YVZ3;E7ER45;O43451 A0A0J9YX77 MGAM Maltase-glucoamylase, intestinal;Maltase;Glucoamylase 1 NVT(0.993)AY(0.007)FPR 79.116 0.025939999999999998 163390000.0 198200.0 153990.0 208800.0 114240.0 207550.0 192470.0 120490.0 186800.0 196120.0 152570.0 True False 187205.45089809527 146592.08925629777 222259.58209181204 125097.33525249145 223883.0042020391 191268.72333687832 132670.30506907942 186152.03439944753 160509.55178287326 151218.3484976639 1.2379810569151093 0.969406759911562 1.469792418049359 0.8272629379656532 1.4805280339739841 1.2648512911105703 0.877342639878976 1.231014861945297 1.061442301000615 1.0 17.206273678020526 -7.582964705318778 0.740041493185519 1.0151195989526263 1.1874615525732137 0.0725056259099991 0.2109579609989176 1.9613801102265134 2.250541628998856 0.19402642797013717 0.08244105511682374 2.6123736507846347e-08 7.582964705318778 0.17234195362058746 NVVGAR ddPTM_KYSE-520_SHP099_60min_R1 4 NVVGAR 6 0 P31946-2;P31946;Q4VY20;Q4VY19;A0A0J9YWE8;A0A0J9YWZ2;P61981;Q04917;A2IDB2;P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4 P31946-2;P61981;P63104 YWHAB;YWHAG;YWHAH;YWHAZ 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed;14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed;14-3-3 protein eta;14-3-3 protein zeta/delta 0 ;;; 135.25 0.052580999999999996 3598800000.0 1995540.0 1994650.0 1301600.0 1256870.0 1952130.0 2130590.0 1654720.0 1696860.0 1794680.0 1949290.0 False True 1884843.4181896332 1898824.0199693101 1385503.2186336324 1376322.5469082543 2105751.5248996676 2117292.197507766 1821995.2461109373 1690973.9887101017 1468811.3522011389 1932020.80712467 0.9755813246104484 0.9828175830027602 0.7171264478748589 0.7123745985720342 1.0899217633341913 1.0958951320295698 0.9430515651756991 0.8752359097139817 0.7602461354373804 1.0 20.88167920085497 NVVHELR ddPTM_KYSE-520_SHP099_60min_R1 3 NVVHELR 7 0 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ;; 84.49799999999999 0.009956399999999999 194340000.0 1334510.0 1148360.0 800200.0 792880.0 1298930.0 1201850.0 900210.0 1057780.0 979500.0 988510.0 False True 1260482.0700202691 1093191.061876497 851782.1723652679 868235.0768119353 1401148.401099274 1194348.8083463793 991212.012002954 1054110.8080677069 801647.491185623 979752.5704491427 1.286531016134444 1.115782795420839 0.86938498357273 0.8861779014408862 1.430104337931926 1.2190310537270246 1.0116962607697555 1.07589491455427 0.8182142260858045 1.0 19.902057927280236 -7.508596649625664 2.4657124470564225 0.9151932141994324 1.115720386529131 0.18034104525123185 0.16855515087238027 0.5795758035558224 6.614005905473526 0.14643589917297312 0.049757459329651754 3.100297359218125e-08 7.508596649625664 0.20052717232969852 NVVHQLS(ph)VTLEDLYNGATR ddPTM_KYSE-520_SHP099_60min_R1 6 NVVHQLSVTLEDLYNGATR 19 0 P31689;P31689-2 P31689 DNAJA1 DnaJ homolog subfamily A member 1 1 NVVHQLS(0.921)VT(0.079)LEDLYNGATR;NVVHQLS(0.654)VT(0.341)LEDLY(0.004)NGATR;NVVHQLS(0.992)VT(0.008)LEDLYNGATR;NVVHQLS(0.992)VT(0.008)LEDLYNGATR;NVVHQLS(0.995)VT(0.005)LEDLYNGATR;NVVHQLS(0.999)VT(0.001)LEDLYNGATR 174.99 3.2048000000000003e-09 212775200.0 130059.0 143106.0 116169.0 117752.0 120396.0 142418.0 105454.6 129076.0 160138.0 118810.1 True False 122844.36800381127 136230.97295351466 123657.43961697175 128943.11467657011 129870.48024046594 141529.11643472538 116114.98010571612 128628.26548256494 131060.97595046813 117757.53494685923 1.0431975164837441 1.1568769082589236 1.0501021414279348 1.0949882292862076 1.1028634413846465 1.2018688782725762 0.9860513822586016 1.092314521874217 1.1129731614169096 1.0 16.84545985090052 -13.657410881100848 0.38223143797793485 2.82518544256303e-09 1.0965728553362295 0.19350593392197857 0.056835257829568456 761.4539906386368 7.42454668483248 625.4247087380436 0.03739153221570603 2.200843284815743e-14 13.657410881100848 1.096572852511044 NVYS(ph)SSR ddPTM_KYSE-520_SHP099_60min_R1 2 NVYSSSR 7 0 O75494;O75494-2;O75494-4;Q5JRI1;O75494-3;O75494-6 O75494;O75494-3 SRSF10 Serine/arginine-rich splicing factor 10 1 NVYS(0.456)S(0.456)S(0.088)R;NVYS(0.392)S(0.392)S(0.216)R 118.71 0.0025976999999999997 3322300000.0 1504920.0 1410670.0 1379580.0 1444730.0 1509380.0 1333690.0 1515920.0 1611880.0 1829700.0 1404600.0 True False 1421439.0876163568 1342899.2957411606 1468509.9342060466 1582036.7048260851 1628159.6188025717 1325365.9460028124 1669163.9875534798 1606288.7644956203 1497472.6029834987 1392156.336762266 1.021034096588745 0.9646181684338252 1.0548455625474908 1.1363929919720248 1.169523548331632 0.9520237856943654 1.198977401802049 1.1538134921192553 1.07564974093798 1.0 20.40888980178016 -4.980785925772646 4.667848572309146 1.1052264630148962 0.9942746270414848 0.2432476359556447 0.07303327252672821 0.2393218285231935 13.412115227928647 0.01925942232790232 0.04001760532205317 1.0452353139612976e-05 4.980785925772646 -0.1109518359734114 NWPS(ph)DEMPDFPK ddPTM_KYSE-520_SHP099_60min_R1 1 NWPSDEMPDFPK 12 0 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 NWPS(1)DEMPDFPK 131.53 0.00018979 0.0 112430.0 93790.0 86551.0 79451.0 93900.0 91087.0 71670.0 72139.0 113020.0 83920.0 True False 106193.28377635143 89284.18761833978 92130.21594649636 87001.99915218592 101289.3957820837 90518.49224599295 78915.10303179445 71888.76664636914 92498.41700234728 83176.53408877212 1.2767216732427698 1.0734300075914334 1.107646729402889 1.0459921191153623 1.2177640832446828 1.088269585137858 0.9487664266891722 0.8642914426999826 1.1120734713906948 1.0 16.343888949636895 -6.643140708113796 4.615896184276528 0.9706382738260446 1.1345074957320178 0.44498870193763274 0.08509505599338123 0.19781217795767192 7.093048565846269 0.03290493689442822 0.024993885806673805 2.2743604358800272e-07 6.643140708113796 0.1638692219059732 NWQWWR ddPTM_KYSE-520_SHP099_60min_R1 2 NWQWWR 6 0 P35579;P35579-2;P35749-4;P35749-3;P35749;P35749-2 P35579 MYH9;MYH11 Myosin-9;Myosin-11 0 ; 122.5 0.060101999999999996 4395500000.0 2406500.0 2203600.0 1483990.0 1301320.0 2459400.0 2041730.0 1566700.0 1356540.0 1230860.0 1395270.0 False True 2273006.647761183 2097735.7483289675 1579650.3698679514 1424997.061543874 2652940.7879281836 2028986.8057287103 1725077.3255185185 1351834.479358815 1007366.8514555758 1382908.9933036347 1.6436415257747305 1.5169007928118838 1.142266322308253 1.030434445393037 1.9183769870427747 1.467187512376833 1.2474265001325047 0.9775296031081656 0.7284404514928163 1.0 20.39927478783024 -7.1802113746804155 2.4391517091837795 0.8651457567139776 1.4408402948596388 0.5138493340777652 0.24009025242279733 0.2693128379194275 3.0854559481517376 0.1575661981615577 0.0740652697408039 6.603719613380298e-08 7.1802113746804155 0.5756945381456612 NWS(ph)GRGEGEQK ddPTM_KYSE-520_SHP099_60min_R1 4 NWSGRGEGEQK 11 1 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 NWS(1)GRGEGEQK;NWS(1)GRGEGEQK;NWS(1)GRGEGEQK;NWS(1)GRGEGEQK 131.35 0.00022037 728260000.0 1947550.0 1904230.0 1770000.0 1767060.0 2035570.0 1726300.0 1797130.0 1830170.0 2231780.0 1574010.0 True False 1839515.519155327 1812747.932492498 1884097.0321001324 1935000.8511140388 2195757.7781910114 1715525.521361528 1978801.4386986003 1823821.567434891 1826545.0105954565 1560065.4959612496 1.1791271096742586 1.1619691206461533 1.2077038028068352 1.2403330860937791 1.4074779449167125 1.0996496786851184 1.2684092070630295 1.169067306569155 1.1708130301734627 1.0 20.573175168100782 -8.380242477917493 0.9767505041118348 0.9998835065322906 1.224335622341608 0.42410525601413185 0.07674155078107056 1.2642211740087967 2.0581061649314294 0.07492137357856486 0.024320849945079444 4.166366994018472e-09 8.380242477917493 0.22445211580931734 NWTEDMEGGIS(ph)SPVK ddPTM_KYSE-520_SHP099_60min_R1 1 NWTEDMEGGISSPVK 15 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.5)S(0.5)PVK 223.06 2.0628e-14 553980000.0 521730.0 518980.0 478070.0 407170.0 460490.0 519840.0 492520.0 568060.0 573250.0 551160.0 True False 492788.5968570299 494047.42179513787 508887.1571390452 445867.3143798761 496727.9431703057 516595.48573514237 542308.7281319858 566089.5324462011 469162.2504565178 546277.1511959919 0.9020853165433391 0.9043896870178354 0.9315549003375174 0.8161925011941584 0.9092965760746067 0.9456655556691947 0.9927355133647492 1.0362680028019349 0.8588355735350772 1.0 19.059273556001727 -6.336662314993995 2.9858939015856927 0.9740782144700688 0.8903752337120787 0.35373136726836507 0.051005970969127644 0.2960893778268583 5.173182931454954 0.019036019537814104 0.016831268101054928 4.6061458453918597e-07 6.336662314993995 -0.0837029807579901 NWTEDMEGGIS(ph)SPVKK ddPTM_KYSE-520_SHP099_60min_R1 4 NWTEDMEGGISSPVKK 16 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.5)S(0.5)PVKK;NWTEDMEGGIS(0.5)S(0.5)PVKK;NWTEDMEGGIS(0.5)S(0.5)PVKK;NWTEDMEGGIS(0.667)S(0.333)PVKK 193.32 3.2414e-12 6253990000.0 5004710.0 4650000.0 4514990.0 4205540.0 4487730.0 4641710.0 4488860.0 4462210.0 5802350.0 4827410.0 True False 4727088.759657964 4426607.020207703 4806033.479639416 4605233.257158293 4840888.8193091685 4612739.366135102 4942637.775851832 4446731.634997647 4748789.505340384 4784642.90306815 0.987971068149458 0.9251697796232908 1.0044706735705498 0.9625030227867558 1.0117555097382398 0.964071814675487 1.0330212465140016 0.9293758646326944 0.9925065676887245 1.0 22.1899798239838 -4.777398468683443 24.999385850751928 0.9854943383797405 0.956570396757425 0.13255314772439164 0.03110780593660546 416.694498043794 652739.9167455746 0.007584129583432393 0.01586418475937286 1.6695580783834635e-05 4.777398468683443 -0.028923941622315597 NWTEDMEGGISS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 6 NWTEDMEGGISSPVK 15 0 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWT(0.007)EDMEGGIS(0.239)S(0.755)PVK;NWTEDMEGGIS(0.112)S(0.888)PVK;NWTEDMEGGIS(0.002)S(0.998)PVK;NWTEDMEGGISS(1)PVK;NWTEDMEGGIS(0.057)S(0.943)PVK;NWTEDMEGGISS(1)PVK 379.01 5.6568e-69 4303620000.0 6106210.0 6760950.0 5217370.0 4793790.0 5571090.0 6189650.0 5573340.0 6244530.0 7696080.0 6023670.0 True False 5767486.358872142 6436143.81360715 5553690.018287153 5249390.360294483 6009503.087833954 6151018.098415917 6136747.597756686 6222869.182914252 6298665.87438882 5970304.970144353 0.966028768666518 1.0780259711676896 0.930218815631603 0.8792499523131664 1.0065655134680085 1.0302686595032002 1.0278784129863818 1.0423034022605033 1.0549990169491337 1.0 22.509373197242624 -5.991751850096158 24.993295851638283 1.0318535912285491 0.9659144231504635 0.3066662461907895 0.047991451095632756 266.4563378572967 807402.3452357441 0.016046109050408815 0.01816727156659528 1.019173563495083e-06 5.991751850096158 -0.06593916807808564 NWTEDMEGGISS(ph)PVKK ddPTM_KYSE-520_SHP099_60min_R1 15 NWTEDMEGGISSPVKK 16 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 NWTEDMEGGIS(0.037)S(0.963)PVKK;NWTEDMEGGIS(0.055)S(0.945)PVKK;NWTEDMEGGIS(0.107)S(0.893)PVKK;NWTEDMEGGIS(0.203)S(0.797)PVKK;NWTEDMEGGIS(0.085)S(0.915)PVKK;NWTEDMEGGIS(0.019)S(0.981)PVKK;NWTEDMEGGIS(0.108)S(0.892)PVKK;NWTEDMEGGIS(0.088)S(0.912)PVKK;NWTEDMEGGIS(0.107)S(0.893)PVKK;NWTEDMEGGIS(0.085)S(0.915)PVKK;NWTEDMEGGIS(0.097)S(0.903)PVKK;NWTEDMEGGIS(0.317)S(0.683)PVKK;NWTEDMEGGIS(0.18)S(0.82)PVKK;NWTEDMEGGIS(0.248)S(0.752)PVKK;NWTEDMEGGIS(0.411)S(0.589)PVKK 220.17 3.3306999999999995e-18 49015770000.0 33479260.0 30802420.0 28518250.0 26824590.0 29242730.0 29061420.0 28317840.0 29391280.0 35383030.0 29440120.0 True False 31622098.708549786 29322625.50782497 30356582.025813304 29373990.968492962 31543966.482626326 28880036.897993613 31180483.62268549 29289328.50965631 28958363.6856005 29179303.44086676 1.083716709435284 1.004911771360432 1.0403463567021862 1.0066721101831901 1.081039050385547 0.9897438763924017 1.0685821779767366 1.0037706543959324 0.9924282032395323 1.0 24.79844210831718 -7.460873278821814 10.847285073035472 0.996833305492906 1.036451488466969 0.2684046649250562 0.030597758209310145 0.9857927672754836 170.65017749906596 0.015393850913625867 0.007373482702550328 3.460403329237099e-08 7.460873278821814 0.039618182974063054 NYAES(ph)DHS(ph)EDEDNDNNSATAEESTKK ddPTM_KYSE-520_SHP099_60min_R1 1 NYAESDHSEDEDNDNNSATAEESTKK 26 1 Q9P2R6;A0A590UJ84;A0A590UK57;H7BYW9 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 2 NYAES(0.999)DHS(0.875)EDEDNDNNS(0.12)AT(0.005)AEESTKK 154.42 3.0172e-07 303920000.0 552040.0 501790.0 450960.0 463590.0 483380.0 487020.0 435840.0 468490.0 555390.0 474920.0 True False 521417.24073554366 477683.2551978544 480029.60316151165 507649.45421658456 521419.2559440211 483980.3275291043 479898.96058849304 466864.91753638856 454545.17624255555 470712.57828216924 1.1077189452604332 1.0148087755401058 1.0197934478686426 1.0784701272891701 1.1077232264472348 1.0281865194581261 1.0195159057356165 0.9918258807533412 0.9656533460426839 1.0 18.84448687937146 -6.882977370337336 1.8752799063634515 0.9842157855514698 1.0605447335828169 0.5428048141476018 0.03117895658916871 0.2974356769188465 2.112364465416107 0.01856390448174965 0.01052625814144503 1.309250141957733e-07 6.882977370337336 0.07632894803134704 NYCSLRDET(ph)PERK ddPTM_KYSE-520_SHP099_60min_R1 4 NYCSLRDETPERK 13 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 NYCSLRDET(1)PERK;NYCSLRDET(1)PERK;NYCSLRDET(1)PERK;NYCSLRDET(1)PERK 104.76 0.00062595 2213830000.0 1296510.0 1243450.0 1277680.0 1047730.0 1129890.0 1081210.0 960950.0 1108050.0 1606350.0 1048200.0 True False 1224590.005771391 1183712.7955434974 1360041.2971602804 1147305.9441884903 1218805.9148053105 1074461.767335515 1058092.2039682276 1104206.433170813 1314677.3327881827 1038913.7634872593 1.1787215154998847 1.1393754103037388 1.3090993159962687 1.1043322213168083 1.1731540746117541 1.0342165106456322 1.0184600889457784 1.062847054277527 1.2654345134241791 1.0 19.986644475584903 -5.842502142179411 1.899864912027427 1.0795935855617331 1.1966967292449873 0.2664689321481195 0.08496125408369934 0.4696124273996404 3.486729226349491 0.03027252013709595 0.03731135272723741 1.437135964593362e-06 5.842502142179411 0.11710314368325414 NYDLSFLK ddPTM_KYSE-520_SHP099_60min_R1 2 NYDLSFLK 8 0 P00533;E9PFD7;Q504U8;P00533-3;P00533-4;P00533-2;C9JYS6 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 0 ; 114.84 0.0077295 570730000.0 644960.0 950550.0 541950.0 644450.0 882050.0 904930.0 683390.0 820630.0 794830.0 648130.0 False True 609182.7831041157 904884.1511953608 576884.9641506589 705698.3342390432 951462.3168220128 899281.9962032605 752473.7304436723 817783.4260664828 650508.908033762 642388.0724375099 0.9483096110309173 1.408625393310655 0.8980318734152354 1.0985545412779936 1.4811332240521464 1.3999045667068184 1.171369399167777 1.2730364419181133 1.0126416350873981 1.0 19.293085580251244 -4.219094578660828 22.25505701619046 1.2047475165909354 0.9483062058487682 0.1330420958279116 0.18600985601122627 13530.13829749752 7110367.1165668145 0.04704475778446764 14.607152909799549 6.0381711853369196e-05 4.219094578660828 -0.25644131074216714 NYDPYKPLDIT(ph)PPPDQK ddPTM_KYSE-520_SHP099_60min_R1 4 NYDPYKPLDITPPPDQK 17 1 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 NYDPYKPLDIT(1)PPPDQK;NYDPYKPLDIT(1)PPPDQK;NYDPYKPLDIT(1)PPPDQK;NYDPYKPLDIT(1)PPPDQK 219.34 1.0572999999999999e-17 5405290000.0 3957600.0 3795510.0 2949250.0 2650130.0 2880340.0 3820940.0 3042740.0 3438570.0 4338820.0 3532520.0 True False 3738064.0387199917 3613168.002423345 3139363.3739668406 2901997.5584093616 3107006.3711072095 3797092.096154276 3350329.8534807097 3426642.4032382686 3550999.6607514094 3501224.6210589744 1.0676447367119746 1.031972636285904 0.8966472345374157 0.8288521510315521 0.887405610145478 1.084503997063123 0.956902288796134 0.9786982482151779 1.014216465688334 1.0 21.73942819015732 -6.243029557911035 24.927508777431186 1.0024102336050857 0.9386132911189303 0.1655524206455583 0.07163364161194605 1737.939211960481 2353228.578940483 0.02643840440661186 0.026394142382376817 5.714397433849475e-07 6.243029557911035 -0.06379694248615542 NYEGS(ph)PIKVTLATLK ddPTM_KYSE-520_SHP099_60min_R1 5 NYEGSPIKVTLATLK 15 1 E5RI98 E5RI98 NPM1 1 NY(0.001)EGS(0.987)PIKVT(0.011)LATLK;NY(0.001)EGS(0.983)PIKVT(0.015)LATLK;NYEGS(0.999)PIKVT(0.001)LATLK;NYEGS(1)PIKVTLATLK;NYEGS(1)PIKVTLATLK 192.18 2.7118000000000005e-11 2011350000.0 2775360.0 2278990.0 2297630.0 1863160.0 1975800.0 2268350.0 2028760.0 2353190.0 2700870.0 2431020.0 True False 2621405.248257007 2169503.8995662685 2445738.9061379805 2040234.1662205192 2131284.219235791 2254192.3862482915 2233846.8595895534 2345027.333128673 2210460.091392051 2409483.054104938 1.0879533864291038 0.9004022235683181 1.0150471496245947 0.846751822032803 0.8845400326035947 0.9355502137306655 0.9271062752584375 0.9732491494943472 0.9174001400948557 1.0 21.20029222396309 -4.254520142734064 24.490892892175335 0.9306995512741922 1.0879534841640155 0.4715952722946112 0.04902724321435331 530.0509063926447 1876070.7180004735 0.01195614417478026 0.11415071628501622 5.565188221168097e-05 4.254520142734064 0.15725393288982326 NYFLHK ddPTM_KYSE-520_SHP099_60min_R1 2 NYFLHK 6 0 Q9NVP1 Q9NVP1 DDX18 ATP-dependent RNA helicase DDX18 0 ; 74.743 0.057129 576640000.0 1306170.0 1128830.0 878500.0 827030.0 1394670.0 1223500.0 938520.0 997620.0 1044910.0 947670.0 False True 1233714.1463146594 1074599.312391627 935129.5156496991 905630.6825443647 1504422.5944131922 1215863.6826657197 1033394.7606725239 994159.4890662596 855180.6840375399 939274.3810761028 1.3134757757378885 1.144073908585142 0.9955871622713109 0.9641811815486829 1.6016859660215723 1.2944712505335614 1.1002054154703864 1.0584335196359516 0.9104695084494704 1.0 19.84118713433347 -7.237441037027176 2.3199623525330835 0.9691043186460955 1.2086124419273383 0.2651746969126243 0.17131177198995867 0.4982259066570032 5.135695402449751 0.12347123336252883 0.05392106147413175 5.788405706141101e-08 7.237441037027176 0.23950812328124282 NYGFVHIEDK ddPTM_KYSE-520_SHP099_60min_R1 2 NYGFVHIEDK 10 0 E9PB51;Q9BWF3;D6R9K7;J3QRR5;Q9BWF3-3;Q9BWF3-4;Q9BWF3-2;Q9BQ04;E9PLB0;E9PM61;U3KQD5 E9PB51;Q9BQ04 RBM4;RBM4B RNA-binding protein 4;RNA-binding protein 4B 0 ; 85.288 0.0074505 298700000.0 1387440.0 1279480.0 804070.0 752470.0 1292220.0 1272010.0 909600.0 1041760.0 1057050.0 1051960.0 False True 1310475.93740693 1218011.8602613658 855901.6387574866 823984.5225616457 1393910.3622739527 1264070.9137618484 1001551.244840523 1038146.3777086112 865116.3660620344 1042640.4528124948 1.2568819230751656 1.1681993125969852 0.8208981691135374 0.7902863545520121 1.3369041633804986 1.2123747072656261 0.9605912010596416 0.9956897173021045 0.8297360453725021 1.0 19.991810309759 -6.958297561081657 20.539980678723662 0.9432555693337905 1.0852463580863818 0.1565784954214534 0.170754370180329 52.83599240709597 26022.381008900542 0.07862237230153826 0.05300669055888438 1.1007848376829445e-07 6.958297561081657 0.1419907887525913 NYGSPLISGST(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 NYGSPLISGSTPK 13 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 NYGS(0.003)PLIS(0.108)GS(0.181)T(0.708)PK;NYGSPLIS(0.001)GS(0.072)T(0.926)PK 114.21 0.00065138 1787390000.0 3848700.0 4932750.0 3535660.0 3127960.0 3280970.0 5050410.0 3612820.0 4955400.0 5483940.0 5358170.0 True False 3635204.938806762 4695773.285791301 3763574.3008560217 3425240.377944535 3539163.6728343265 5018888.517835538 3978039.1033253507 4938210.873999059 4488194.734877479 5310700.782393174 0.6845056966603607 0.8842097263998431 0.7086775277066227 0.6449695658434386 0.6664212159283929 0.9450520229787572 0.7490610498173683 0.9298604979536695 0.8451228790289618 1.0 22.340470816149335 -6.259537046850574 24.971957041888906 0.8803881819920009 0.7224559995969365 0.5003856337612742 0.087386933920643 166.38571341091006 2184156.9795313766 0.029931234541602837 0.028493528929265308 5.501269907371175e-07 6.259537046850574 -0.15793218239506435 NYGYNPS(ph)PVKPEGLR ddPTM_KYSE-520_SHP099_60min_R1 6 NYGYNPSPVKPEGLR 15 1 E9PRF4;Q15047-3;Q15047 E9PRF4 SETDB1 Histone-lysine N-methyltransferase SETDB1 1 NY(0.002)GY(0.005)NPS(0.992)PVKPEGLR;NY(0.003)GY(0.03)NPS(0.967)PVKPEGLR;NYGYNPS(1)PVKPEGLR;NYGYNPS(1)PVKPEGLR;NYGYNPS(1)PVKPEGLR;NYGYNPS(1)PVKPEGLR 159.8 3.7435e-08 20768100000.0 7308750.0 7041010.0 6403080.0 5973230.0 6292090.0 6599020.0 6176170.0 6289550.0 7520930.0 6280340.0 True False 6903319.06786809 6702749.310828519 6815832.78209024 6540923.98328291 6787241.685905129 6557833.0683978135 6800517.53721052 6267733.019042012 6155318.699216634 6224701.073630579 1.109020174014831 1.0767985854329736 1.094965477292371 1.0508013004820316 1.0903723095487452 1.053517749820705 1.0925050788413353 1.0069130942839533 0.9888537017933494 1.0 22.56957312619233 -7.3215442956470955 5.178403923293664 0.9963510529006412 1.0796408192504243 0.825357428024272 0.017413072474752336 0.08371430627368534 4.682293065241478 0.0094400972755284 0.004439027503110325 4.769311672840476e-08 7.3215442956470955 0.08328976634978313 NYILDQTNVYGS(ph)AQR ddPTM_KYSE-520_SHP099_60min_R1 2 NYILDQTNVYGSAQR 15 0 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 NYILDQTNVYGS(1)AQR;NYILDQTNVYGS(1)AQR 262.74 5.1685000000000005e-25 981360000.0 1036090.0 1020430.0 999470.0 834540.0 912450.0 964250.0 926650.0 978650.0 1131760.0 1064580.0 True False 978616.0223057916 971407.0111033441 1063897.435408542 913854.4306864 984254.6238696716 958231.7580796236 1020324.8252324878 975255.2915686273 926260.9133478734 1055148.6494307073 0.927467445306206 0.9206352219921383 1.0082915198560458 0.8660906983859186 0.932811338384136 0.9081485898661065 0.966996286052199 0.9242823673184006 0.8778487408836909 1.0 20.009014829573722 NYILSAS(ph)ASALWNDEVDKAEQELR ddPTM_KYSE-520_SHP099_60min_R1 3 NYILSASASALWNDEVDKAEQELR 24 1 B7ZC38;Q9NR46;Q9NR46-2 B7ZC38 SH3GLB2 Endophilin-B2 1 NYILS(0.002)AS(0.83)AS(0.168)ALWNDEVDKAEQELR;NYILS(0.054)AS(0.938)AS(0.009)ALWNDEVDKAEQELR;NYILS(0.017)AS(0.95)AS(0.033)ALWNDEVDKAEQELR 166.28 1.7296000000000002e-10 123205000.0 64904.0 68545.0 55065.0 53333.0 47275.0 60515.0 41136.0 63060.0 75981.0 57792.0 True False 61303.64573708369 65251.99531185748 58614.57800711515 58401.75228484887 50995.273542044815 60137.30343810054 45294.428328671645 62841.25957831465 62184.765725140285 57280.007841495615 1.0702450653764264 1.1391757398571214 1.023299056964387 1.0195835246122404 0.8902804916360727 1.0498829470224864 0.7907545762565137 1.0970888787621687 1.085627744626311 1.0 15.805744069653121 -4.987510544504471 2.7922193220968627 0.9847334105241977 1.1044182947703547 0.2005493279912749 0.08830799735388856 0.4061856003543772 6.3907171793873045 0.02477620740745442 0.05723522780322379 1.029175538901305e-05 4.987510544504471 0.11968488424615698 NYITMDELR ddPTM_KYSE-520_SHP099_60min_R1 1 NYITMDELR 9 0 P12814-3;P12814;P12814-2;H9KV75;H0YJW3 P12814-3 ACTN1 Alpha-actinin-1 0 128.86 0.0034720999999999997 0.0 312160.0 327800.0 254520.0 262890.0 321050.0 344310.0 307080.0 295320.0 307610.0 297990.0 False True 294843.8625244676 312051.9959621685 270926.76644639886 287874.9865592394 346314.80847537785 342161.0335746904 338122.6432119916 294295.60384820617 251755.7782170594 295350.0404327122 0.9982861762690026 1.0565496977924451 0.9173073619677478 0.9746908655826787 1.172557173068262 1.158493268101119 1.1448200336001784 0.9964298749275227 0.8523979812165131 1.0 18.17206628389894 -7.524713536691173 24.37960821909045 0.9256038999247862 1.0603200738928904 0.28777362459164635 0.08480370817713824 62.91277851114008 835837.2411844471 0.06217749449167287 0.023885289269774276 2.987352445220714e-08 7.524713536691173 0.1347161739681042 NYIVEDGDIIFFK ddPTM_KYSE-520_SHP099_60min_R1 3 NYIVEDGDIIFFK 13 0 J3KQ32;Q9NTK5;Q9NTK5-2 J3KQ32 OLA1 Obg-like ATPase 1 0 ;; 168.94 5.3706e-06 264964000.0 469119.0 579955.0 504086.0 390621.0 546113.0 541277.0 394206.0 453068.0 556830.0 434325.0 False True 443096.03390445845 552093.0912697972 536580.190126117 427745.5023955142 589088.9861420769 537898.6894664918 434056.18955980963 451496.41285486607 455723.7085420022 430477.21839973674 1.0293135500912942 1.282514074315378 1.2464775537270223 0.9936542147006584 1.3684556602831766 1.2495404320490768 1.0083139618244548 1.0488276581354674 1.0586476799773916 1.0 18.715577364157898 -6.766635529741728 24.99841771629499 1.0330162674893997 1.2000440024872516 0.366244936196393 0.10682821488868537 146.23831452111625 703535.5995120642 0.0436770383111268 0.030446846650891847 1.7114510029603651e-07 6.766635529741728 0.16702773499785195 NYKVS(ph)PLASDR ddPTM_KYSE-520_SHP099_60min_R1 2 NYKVSPLASDR 11 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 NYKVS(0.999)PLAS(0.001)DR;NYKVS(0.965)PLAS(0.035)DR 144.97 5.029e-05 3519800000.0 4488200.0 4059300.0 3751600.0 3667300.0 3902300.0 3789200.0 3578700.0 3734900.0 4677100.0 3876500.0 True False 4239230.59899512 3864285.1348664826 3993434.138772238 4015839.0893860473 4209388.8089502165 3765550.1972676287 3940469.920746235 3721944.5036322176 3827856.5400962546 3842157.2258713674 1.1033464665240762 1.0057592408884561 1.0393729105832108 1.0452042572191436 1.095579530323766 0.9800614539957133 1.025587889587879 0.9687121803788531 0.9962779540413342 1.0 21.87348512641814 -6.279582704152961 24.942269576116672 0.994138653640171 1.0532290924175132 0.5362309892419399 0.02947499077558863 684.9245216781989 941586.3243801572 0.010223462717655004 0.009034878882593349 5.253119686664421e-07 6.279582704152961 0.059090438777342214 NYKVS(ph)PLASDRR ddPTM_KYSE-520_SHP099_60min_R1 1 NYKVSPLASDRR 12 2 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 NYKVS(1)PLASDRR 100.23 0.00088599 1087600000.0 1330100.0 1293800.0 1313800.0 1167000.0 1137700.0 1188100.0 1196400.0 1151900.0 1568300.0 1233400.0 True False 1256316.7015113856 1231643.9059666062 1398489.6501543229 1277911.3291286565 1227230.5173724885 1180684.6271966822 1317343.7877387858 1147904.3277554815 1283536.2536257405 1222473.0355706804 1.0276845909528844 1.0075018999430483 1.1439840466513633 1.045349297649004 1.0038916864939988 0.9658164988854004 1.0776055989846987 0.9390017565660347 1.0499505643709797 1.0 20.221371212925007 -5.688321367094661 4.865794673755736 1.004539580343276 1.0602943895521009 0.2016720359546017 0.04912733937617867 0.324078410264242 14.198118114953324 0.014541500332472252 0.01870625724496424 2.0496449313569205e-06 5.688321367094661 0.05575480920882492 NYKVSPLAS(ph)DRR ddPTM_KYSE-520_SHP099_60min_R1 1 NYKVSPLASDRR 12 2 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 NYKVS(0.002)PLAS(0.998)DRR 120.77 9.3201e-05 1920800000.0 2352700.0 2179800.0 1986500.0 1921800.0 1808400.0 1838800.0 1922500.0 1772700.0 2479900.0 1653400.0 True False 2222191.0410088263 2075079.1360534958 2114552.9685123814 2104447.2941897614 1950710.7916115008 1827323.3671317718 2116845.0617918903 1766550.9174512892 2029612.6731916564 1638752.1623257352 1.3560263059272295 1.2662556204402016 1.2903433582729096 1.2841766696454615 1.190363519547111 1.1150699960257653 1.2917420403507753 1.077985407472586 1.2385110572859337 1.0 20.64416625340175 -1.0000006217293513 0.029975464817309158 0.1189616292144665 2.799090563071363 0.6388739383066249 0.06440258406136903 836.5770901475372 1.927149204278475 54.972590096904845 133.11302326850685 0.09999985684162885 1.0000006217293513 2.6801289338568965 NYPS(ph)QEELIK ddPTM_KYSE-520_SHP099_60min_R1 8 NYPSQEELIK 10 0 P38398;P38398-4;P38398-8;P38398-7;E7EUM2;P38398-5;H0Y8B8;B7ZA85;P38398-3;P38398-6;A0A2R8Y7V5;K7EPC7 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 NYPS(1)QEELIK;NY(0.001)PS(0.999)QEELIK;NYPS(1)QEELIK;NYPS(1)QEELIK;NYPS(1)QEELIK;NYPS(1)QEELIK;NYPS(1)QEELIK;NYPS(1)QEELIK 211.38 5.3444999999999995e-09 4539990000.0 9048690.0 8928760.0 7743470.0 6675910.0 7150260.0 8405910.0 7414840.0 8511060.0 10193200.0 8602840.0 True False 8546741.127583688 8499808.96725801 8242626.466190063 7310386.479214466 7712944.78258575 8353445.597676003 8164404.3890647525 8481537.119356342 8342371.829661357 8526625.530508243 1.002359150991617 0.9968549617718894 0.9666926777419705 0.8573598609506098 0.9045717740258271 0.9796895111421744 0.9575188167760548 0.9947120451120347 0.9783907830609394 1.0 23.023543467536953 -6.965665242686714 1.7775905026077952 0.9900632744163557 0.9465945783442655 0.1565042689834112 0.04127387615885715 0.7953766411430312 4.9745656719211295 0.028752035863442806 0.014899737794491415 1.0822678497193783e-07 6.965665242686714 -0.04346869607209014 NYQQNY(ph)QNSESGEKNEGS(ph)ESAPEGQAQQR ddPTM_KYSE-520_SHP099_60min_R1 1 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 2 NY(0.079)QQNY(0.284)QNS(0.438)ES(0.43)GEKNEGS(0.569)ES(0.2)APEGQAQQR 44.263999999999996 0.041256 0.0 311130.0 258790.0 233140.0 253210.0 259800.0 236530.0 242260.0 255520.0 316500.0 245260.0 True False 293870.99867772206 246357.33994829058 248168.57743718938 277275.0022696373 280244.7819402056 235053.72853365156 266750.0050297549 254633.66075881655 259031.57831572223 243087.18720939287 1.2089119218965025 1.0134525919545108 1.0209035707974994 1.1406401359640375 1.1528570681053854 0.9669523566093126 1.0973429249480726 1.0474993095357086 1.0655912443982292 1.0 17.891114327340194 -6.247467891410809 24.96699980928511 1.0423124781485482 1.0991828929824516 0.23066530498590532 0.06417481579149784 1561.233580635413 2789923.264921281 0.02157758423021868 0.021474504500564342 5.656295740981999e-07 6.247467891410809 0.05687041483390343 NYQQNY(ph)QNSESGEKNEGSES(ph)APEGQAQQR ddPTM_KYSE-520_SHP099_60min_R1 1 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 2 NYQQNY(0.376)QNS(0.375)ES(0.272)GEKNEGS(0.215)ES(0.761)APEGQAQQR 81.525 0.013766999999999998 586850000.0 644110.0 617840.0 496500.0 547760.0 560690.0 516290.0 524340.0 545870.0 699080.0 521220.0 True False 608379.9342985478 588158.0390032528 528505.1844280877 599818.9457099505 604813.113110293 513067.642601948 577345.4042652582 543976.5043770156 572144.6943726864 516602.39630302414 1.1776560438981967 1.1385120224224747 1.0230405205439304 1.1610843271391136 1.1707516601520505 0.9931576900796977 1.1175817386774256 1.0529887361535477 1.1075145962681188 1.0 18.978694809968744 -6.246658749898428 24.97344389696398 1.0615186676399078 1.1297650309336627 0.3408394839014943 0.05496381544061577 1118.0646013498947 1889090.868764377 0.01823828651861816 0.018168115437136707 5.666843905960291e-07 6.246658749898428 0.06824636329375489 NYQQNYQNS(ph)ES(ph)GEKNEGSESAPEGQAQQR ddPTM_KYSE-520_SHP099_60min_R1 1 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 2 NYQQNYQNS(1)ES(0.874)GEKNEGS(0.01)ES(0.116)APEGQAQQR 164.65 3.1406000000000005e-10 798750000.0 426700.0 386850.0 339720.0 334140.0 313920.0 347180.0 342140.0 377340.0 390660.0 343860.0 True False 403030.1003946385 368265.1453263119 361618.8947712189 365896.565137146 338623.71803952864 345013.12084011803 376726.8501646175 376031.0956118182 319725.99173718825 340813.66791903175 1.1825526331015213 1.0805468793986333 1.0610457525932613 1.0735970988818244 0.9935743484324596 1.012321844211025 1.1053748297856347 1.1033333783466488 0.9381254973997892 1.0 18.378623668696587 -1.0000054921555914 0.7904648052659603 1.0358760181716977 35.607866779709376 0.46373098269883983 0.04882749765920408 461.89982137736473 1.6681921153132409 0.017826767505425896 28568.392687135987 0.09999873539243691 1.0000054921555914 34.57199076153768 NYQQNYQNS(ph)ESGEK ddPTM_KYSE-520_SHP099_60min_R1 11 NYQQNYQNSESGEK 14 0 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNS(0.998)ES(0.002)GEK;NYQQNYQNS(0.998)ES(0.002)GEK;NYQQNYQNS(0.622)ES(0.378)GEK;NYQQNYQNS(1)ESGEK;NYQQNYQNS(0.981)ES(0.019)GEK;NYQQNYQNS(0.672)ES(0.328)GEK;NYQQNYQNS(0.979)ES(0.021)GEK;NYQQNYQNS(0.999)ES(0.001)GEK;NYQQNYQNS(1)ESGEK;NYQQNYQNS(1)ESGEK;NYQQNYQNS(1)ESGEK 485.03 9.619099999999997e-152 9918150000.0 12782370.0 10671340.0 9733590.0 11453710.0 10855760.0 11217650.0 12473830.0 12637890.0 11785640.0 11129210.0 True False 12073306.455077153 10158672.808392098 10361032.78569464 12542267.15471652 11710046.551174788 11147636.48537402 13734806.469249176 12594052.109295694 9645664.867806986 11030613.857794354 1.0945271596599333 0.9209526268761432 0.9392979320342557 1.1370416294514756 1.061595184287984 1.010608895306128 1.245153410890547 1.1417362869969923 0.8744449757881111 1.0 23.395009743894505 -5.254388076149846 24.939165609374395 1.0779514554926486 0.9785285780453014 0.11134013641317575 0.1030146701040379 1023.3342641930384 3619338.9527051426 0.028296871779378688 0.047662040584502484 5.566880821907606e-06 5.254388076149846 -0.09942287744734724 NYQQNYQNS(ph)ESGEKNEGS(ph)ESAPEGQAQQR ddPTM_KYSE-520_SHP099_60min_R1 3 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 2 NYQQNY(0.13)QNS(0.532)ES(0.359)GEKNEGS(0.844)ES(0.135)APEGQAQQR;NYQQNY(0.001)QNS(0.999)ES(0.001)GEKNEGS(0.636)ES(0.364)APEGQAQQR;NYQQNYQNS(0.997)ES(0.359)GEKNEGS(0.62)ES(0.024)APEGQAQQR 262.58 3.1948000000000003e-41 2619160000.0 4565640.0 4079540.0 3879700.0 3918200.0 3856080.0 3857490.0 3831310.0 4168150.0 5051710.0 3837260.0 True False 4312374.847822305 3883552.774885621 4129791.669739482 4290584.549950211 4159531.5579060437 3833413.9740467337 4218616.2047822615 4153691.6605035276 4134446.807245865 3803264.8617431084 1.133861301956725 1.0211102608051639 1.0858543435354435 1.128131935566474 1.09367391152444 1.0079271661058617 1.1092091553278753 1.0921384156768434 1.08707832810544 1.0 21.85880698197599 NYQQNYQNS(ph)ESGEKNEGSES(ph)APEGQAQQR ddPTM_KYSE-520_SHP099_60min_R1 1 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 2 NYQQNYQNS(0.999)ES(0.001)GEKNEGS(0.146)ES(0.854)APEGQAQQR 217.1 1.5215999999999999e-22 1879000000.0 594350.0 531480.0 529560.0 552400.0 461300.0 509080.0 536430.0 627320.0 663120.0 520650.0 True False 561380.2206926488 505946.9030322563 563696.2849259574 604899.9299148838 497601.6855620361 505902.64288636215 590657.5794522888 625143.9733375887 542714.1238948553 516037.44605957053 1.0878672177364508 0.9804461030796021 1.092355388606596 1.17220161934732 0.9642743745859749 0.9803603338273277 1.1446021678514087 1.2114314147377265 1.051695236535616 1.0 18.97711623249679 -6.784533183256009 24.969131545476852 1.119551499554163 1.0473541807171223 0.08937670518298324 0.07942727778163182 463.05811732421523 500656.0097015748 0.033838517219291785 0.022829677397311045 1.6423541670811233e-07 6.784533183256009 -0.07219731883704084 NYQQNYQNS(ph)ESGEKNEGSESAPEGQAQQR ddPTM_KYSE-520_SHP099_60min_R1 15 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNY(0.171)QNS(0.704)ES(0.122)GEKNEGS(0.002)ES(0.001)APEGQAQQR;NY(0.004)QQNY(0.129)QNS(0.483)ES(0.357)GEKNEGS(0.019)ES(0.008)APEGQAQQR;NYQQNYQNS(0.944)ES(0.056)GEKNEGSESAPEGQAQQR;NYQQNYQNS(0.997)ES(0.003)GEKNEGSESAPEGQAQQR;NYQQNYQNS(0.981)ES(0.019)GEKNEGSESAPEGQAQQR;NYQQNYQNS(0.992)ES(0.008)GEKNEGSESAPEGQAQQR;NYQQNYQNS(0.999)ES(0.001)GEKNEGSESAPEGQAQQR;NYQQNYQNS(0.995)ES(0.003)GEKNEGS(0.002)ESAPEGQAQQR;NYQQNYQNS(0.788)ES(0.212)GEKNEGSESAPEGQAQQR;NYQQNYQNS(0.538)ES(0.327)GEKNEGS(0.123)ES(0.012)APEGQAQQR;NYQQNYQNS(1)ESGEKNEGSESAPEGQAQQR;NYQQNYQNS(1)ESGEKNEGSESAPEGQAQQR;NYQQNYQNS(0.994)ES(0.006)GEKNEGSESAPEGQAQQR;NYQQNYQNS(0.761)ES(0.239)GEKNEGSESAPEGQAQQR;NYQQNYQNS(0.997)ES(0.003)GEKNEGSESAPEGQAQQR 484.23 7.435699999999997e-179 74490930000.0 19185893.0 17881689.0 17011390.0 16181370.0 15887591.0 16656480.0 16140550.0 16857102.0 21252400.0 16684911.0 True False 18121613.269160494 17022625.819477588 18107971.41858634 17719242.539693706 17137854.02367275 16552520.72991246 17772194.310587827 16798628.64763919 17393499.889406186 16537095.669204336 1.0958159541222752 1.0293600617657075 1.0949910299126657 1.0714845517094507 1.0363279239889236 1.0009327551231895 1.0746865511386932 1.0158149280663524 1.0517868577005731 1.0 23.97920254735707 -5.787321161570302 5.495678018989142 1.0312001889527647 1.0715315116584134 0.375762125201731 0.027144648945802385 0.20333566024098376 17.040980186609275 0.008014726832484416 0.009461008064010743 1.6318447493849343e-06 5.787321161570302 0.040331322705648764 NYQQNYQNSES(ph)GEKNEGSESAPEGQAQQR ddPTM_KYSE-520_SHP099_60min_R1 1 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNS(0.173)ES(0.801)GEKNEGS(0.025)ESAPEGQAQQR 93.759 0.0023853000000000004 5974400000.0 70942.0 67839.0 71811.0 53735.0 78493.0 62618.0 55850.0 53532.0 88385.0 63806.0 True False 67006.70584062905 64579.91261158504 76440.05196166255 58841.95824398313 84669.95253592225 62227.177835032235 61495.86304347315 53346.30998646274 72336.51200453425 63240.7284803168 1.059549873172071 1.0211759757271779 1.2087155508566594 0.9304440296303235 1.338851632018678 0.9839731345662783 0.972409150261659 0.8435435718149005 1.1438279371979159 1.0 15.94856636598209 -6.472668631150588 24.99957170182048 0.9770898320987802 1.1079685858661237 0.19727230638636817 0.12289516380709416 557.6121711476744 277634.68336108513 0.041125701172265695 0.03626891306596449 3.3676842735587213e-07 6.472668631150588 0.13087875376734348 NYQQNYQNSESGEKNEGS(ph)ES(ph)APEGQAQQR ddPTM_KYSE-520_SHP099_60min_R1 2 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 2 NYQQNYQNSES(0.004)GEKNEGS(0.999)ES(0.997)APEGQAQQR;NY(0.001)QQNY(0.002)QNS(0.227)ES(0.271)GEKNEGS(0.516)ES(0.983)APEGQAQQR 129.25 0.00012248 269130000.0 229976.0 224762.0 187763.0 221945.0 201362.0 208106.0 192842.0 199682.0 275598.0 223990.0 True False 217218.77283420967 213964.09614535986 199866.503411422 243038.58606980267 217208.04380694288 206807.13326099873 212336.35131655217 198989.3497481294 225556.35046020983 222005.62286158328 0.978438158612054 0.9637778241263864 0.9002767625216203 1.0947406779031588 0.9783898308844564 0.9315400690996888 0.9564458259191942 0.8963257199669932 1.0159938633664263 1.0 17.760236691425668 -6.02643149269841 23.586552792380147 0.9535343149778666 0.9843053099893421 0.03731246057707005 0.05434875396663308 1120.6281453867734 1000007.7600017388 0.017943303265164915 0.018015805662697084 9.409542481149887e-07 6.02643149269841 0.03077099501147551 NYQQNYQNSESGEKNEGS(ph)ESAPEGQAQQR ddPTM_KYSE-520_SHP099_60min_R1 3 NYQQNYQNSESGEKNEGSESAPEGQAQQR 29 1 P67809;H0Y449;C9J5V9 P67809 YBX1 Nuclease-sensitive element-binding protein 1 1 NYQQNYQNS(0.027)ES(0.124)GEKNEGS(0.843)ES(0.005)APEGQAQQR;NYQQNYQNSESGEKNEGS(0.999)ES(0.001)APEGQAQQR;NYQQNYQNSESGEKNEGS(1)ESAPEGQAQQR 334.86 8.396199999999999e-79 13388800000.0 367230.0 336940.0 324384.0 310142.0 334678.0 329152.0 277956.0 323138.0 354100.0 317939.0 True False 346859.0198451444 320752.89664274885 345294.31167275057 339617.8024324078 361015.2545426643 327097.6402752651 306054.5050691429 322017.10969897587 289804.3661345885 315122.3078127993 1.1007123622971133 1.0178679474297785 1.0957469627249468 1.077733292795508 1.1456353472669032 1.0380021730152467 0.9712244975400371 1.0218797645080477 0.9196567775415916 1.0 18.265552362183968 -6.571386741069241 4.402856514052331 0.9809785643199949 1.0844731956392557 0.6433718743115365 0.038237350107946225 0.13859276845474872 5.791081400649382 0.014809299985150143 0.01149698583515267 2.6829541995152187e-07 6.571386741069241 0.10349463131926084 NYQSQADIPIRS(ph)PFGIVK ddPTM_KYSE-520_SHP099_60min_R1 3 NYQSQADIPIRSPFGIVK 18 1 Q14966;Q14966-3;Q14966-2;Q14966-6;Q14966-4 Q14966 ZNF638 Zinc finger protein 638 1 NY(0.003)QS(0.005)QADIPIRS(0.992)PFGIVK;NYQSQADIPIRS(1)PFGIVK;NYQSQADIPIRS(1)PFGIVK 171.5 1.0071000000000001e-08 2662230000.0 2448600.0 2569660.0 2371010.0 2117010.0 2080000.0 2314700.0 2508740.0 3179180.0 3683660.0 3150230.0 True False 2312771.276836913 2446209.6764617064 2523849.098350134 2318209.9938977323 2243684.166418893 2300253.0987056317 2762347.9221429317 3168152.166606194 3014800.2015118264 3122321.4130418533 0.7407217165973141 0.7834586363351171 0.8083245651162253 0.7424635991075842 0.7185948752896111 0.7367124630723588 0.8847096620497422 1.0146784227187204 0.9655636953066671 1.0 21.574187625901352 -6.9762563220425475 3.17549158667471 0.9907694768878051 0.7567166586805488 0.9380808323826947 0.027580684305515062 0.062470876809510544 1.297943619744974 0.015023070226876486 0.008960905405987147 1.0561939560469152e-07 6.9762563220425475 -0.23405281820725632 NYS(ph)VGSR ddPTM_KYSE-520_SHP099_60min_R1 1 NYSVGSR 7 0 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 NY(0.001)S(0.999)VGSR 78.939 0.016568 491560000.0 739040.0 738390.0 659610.0 638470.0 639330.0 758240.0 671570.0 686740.0 728610.0 845040.0 True False 698043.9779602856 702916.6360540143 702129.516013315 699149.9968369942 689641.6337098989 753507.5429051524 739458.8494915891 684357.8592263212 596312.7907634068 837553.6030311707 0.8334320041535384 0.8392497310143555 0.8383099463392605 0.8347525391887956 0.8233999963871363 0.8996529179483569 0.8828794322123753 0.8170914157011296 0.7119697039154331 1.0 19.67582199964391 -10.003906394380515 4.3761492723960504 1.000006793794494 0.8346337953803663 0.5364180373881459 0.04698065543556086 12314059.65849544 7037505.875275581 780.8555291036924 0.011803258119644422 9.910455267772858e-11 10.003906394380515 -0.16537299841412778 NYS(ph)VGSRPLKPLS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 2 NYSVGSRPLKPLSPLR 16 2 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 2 NYS(0.966)VGS(0.034)RPLKPLS(1)PLR;NY(0.065)S(0.903)VGS(0.047)RPLKPLS(0.985)PLR 88.23899999999999 0.0017486000000000001 1110740000.0 1676250.0 1791240.0 1827160.0 1969350.0 1775740.0 1950300.0 1721690.0 1971310.0 2437800.0 2181700.0 True False 1583265.0709784704 1705186.1416939462 1944941.6571593662 2156516.431893333 1915480.6354214814 1938127.454272946 1895735.2272751539 1964471.985717215 1995156.9719370212 2162371.8353369175 0.7321890921372378 0.7885721196642679 0.8994482934783167 0.997292138499079 0.8858238921351063 0.8962970302334556 0.8766925263710628 0.9084801945781596 0.922670624604282 1.0 21.044183195482386 -4.6946863042974405 3.0879412643745074 0.9200329869384877 0.7424999465109088 0.7296762951550249 0.040450915356456105 0.12834212045280202 2.3912203627766226 0.010828337308739252 0.03463971810938948 2.0198247786570842e-05 4.6946863042974405 -0.1775330404275789 NYS(ph)VGSRPLKPLSPLR ddPTM_KYSE-520_SHP099_60min_R1 1 NYSVGSRPLKPLSPLR 16 2 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 NYS(0.984)VGS(0.016)RPLKPLSPLR 104.45 0.00054048 6036700000.0 396090.0 348740.0 367060.0 282560.0 312340.0 295140.0 325060.0 300060.0 507540.0 368220.0 True False 374118.09811416024 331986.00693058816 390721.27491676516 309414.41744523804 336919.3810284984 293297.921783376 357920.23707988183 299019.16189453047 415383.5300422165 364957.85727082513 1.0250994482262579 0.9096557323445444 1.0705928564974605 0.8478086203131946 0.9231733865054996 0.803648738998727 0.9807166223421767 0.819325179434722 1.1381684810089507 1.0 18.477370355918293 -7.7696768260450275 24.999975228174694 1.0690842315931655 0.9225219209437745 0.3117171063028973 0.08712493102130676 234.85887840284167 712749.6775684004 0.07572890979581688 0.02087750457918943 1.699507846211522e-08 7.7696768260450275 -0.14656231064939096 NYSEVIEVDES(ph)DVEEDIFPTTSK ddPTM_KYSE-520_SHP099_60min_R1 1 NYSEVIEVDESDVEEDIFPTTSK 23 0 F8W7U8;P49959-2;P49959;P49959-3 F8W7U8 MRE11A Double-strand break repair protein MRE11A 1 NY(0.001)S(0.001)EVIEVDES(0.998)DVEEDIFPTTSK 78.717 0.0066097 83057000.0 144170.0 159700.0 126970.0 129760.0 139290.0 136040.0 120830.0 184600.0 203900.0 157800.0 True False 136172.6027042303 152027.772285413 135154.689359183 142092.35138623338 150251.3305483112 135190.9238985243 133044.67558715952 183959.66568596393 166876.8999007133 156402.0147665423 0.8706575993122084 0.9720320579779063 0.864149285806358 0.9085071672403413 0.9606738811682696 0.8643809614621698 0.8506583229490506 1.1761975442615384 1.0669741061188158 1.0 17.254899571960447 -7.2551357657915485 24.999708771707585 1.091189371288235 0.9016508121445665 0.6915986068288567 0.055649578688699394 255.3989201864272 1012899.7826393403 0.026009419016533853 0.01453386872358251 5.557305019292062e-08 7.2551357657915485 -0.18953855914366846 NYSVGSRPLKPLS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 3 NYSVGSRPLKPLSPLR 16 2 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 NYSVGSRPLKPLS(1)PLR;NYSVGSRPLKPLS(1)PLR;NYSVGSRPLKPLS(1)PLR 187.0 6.091499999999999e-11 13199210000.0 7922760.0 7054790.0 6426200.0 6063530.0 5982100.0 6393610.0 5416310.0 6318780.0 7687090.0 5580260.0 True False 7483268.7091695 6715867.298944322 6840443.134283534 6639806.068133229 6452857.236506955 6353705.108400797 5963843.472891571 6296861.626994333 6291308.231769367 5530823.237776588 1.3530117285356966 1.2142617853113902 1.236785708059153 1.2005095412889126 1.166708274535461 1.1487810828962617 1.0782921848157019 1.1385035023331709 1.1374994212070493 1.0 22.399062804334413 -1.0000000000000002 0.15059445049354117 0.9949609166417189 2.174189671989015 0.8579277972880875 0.03383883098749248 24.86228293892954 0.24573243396333913 0.11950696726769197 6.411728919607296 0.09999999999999995 1.0000000000000002 1.179228755347296 NYTEDIFPVT(ph)PPELEETIRDEK ddPTM_KYSE-520_SHP099_60min_R1 2 NYTEDIFPVTPPELEETIRDEK 22 1 Q5T3J3-2;Q5T3J3 Q5T3J3-2 LRIF1 Ligand-dependent nuclear receptor-interacting factor 1 1 NYTEDIFPVT(0.999)PPELEET(0.001)IRDEK;NYTEDIFPVT(1)PPELEETIRDEK 130.23 9.190700000000001e-05 109745000.0 182405.0 201026.0 146789.0 130082.0 130073.0 181570.0 134155.0 166236.0 231034.0 166086.0 True False 172286.6310346475 191368.40921382245 156251.25381070393 142444.95416942073 140309.0050858676 180436.7542800285 147716.69662662726 165659.36611577394 189084.0494931896 164614.60725295267 1.0466059720320307 1.1625238635096273 0.9491943419735691 0.8653239013627432 0.8523484484597639 1.0961163003157 0.8973486563050904 1.0063466959600726 1.148646846404319 1.0 17.328732834961627 -9.719835092688955 13.814640214002708 0.9999999943915728 0.9971343319665545 0.0 0.10641045317130537 0.0 0.0 0.10838403037405804 0.02628698855072907 1.9061843837741488e-10 9.719835092688955 -0.0028656624250182894 NYVPPKGDKK ddPTM_KYSE-520_SHP099_60min_R1 2 NYVPPKGDKK 10 2 P26583;D6R9A6 P26583 HMGB2 High mobility group protein B2 0 ; 72.652 0.013544999999999998 1211720000.0 1680620.0 1654300.0 1141940.0 1136460.0 1710690.0 1519830.0 1204970.0 1462030.0 1586270.0 1211050.0 False True 1587392.658367091 1574824.944845077 1215551.2795686007 1244468.8167108416 1845311.5705053539 1510344.1772176875 1326780.1269739282 1456958.5591703663 1298243.354612577 1200321.0391826434 1.322473410486934 1.3120031170306334 1.0126884724076222 1.0367799747626356 1.537348351206037 1.258283515755213 1.1053543874207161 1.2138073995291125 1.0815801041833055 1.0 20.194988891568258 -7.867861981794893 1.1151439846556273 0.9998919571164181 1.2325837312381533 0.2188336006235556 0.14474717835769463 0.8279215240815614 2.2628192649974275 0.14610291863829614 0.0478366476924597 1.3556201581741494e-08 7.867861981794893 0.23269177412173525 NYYEQWGK ddPTM_KYSE-520_SHP099_60min_R1 5 NYYEQWGK 8 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;; 242.87 2.4912e-12 28744740000.0 15900820.0 14593180.0 9602000.0 9024040.0 15853930.0 15397560.0 11923310.0 11852020.0 11204680.0 12132640.0 False True 15018769.817101195 13892101.727990232 10220960.2837432 9881682.048423449 17101544.094477635 15301458.116605137 13128634.53509173 11810908.108902264 9170192.558997167 12025154.248651091 1.2489461263073536 1.1552535161491642 0.8499650043898378 0.8217509600371169 1.4221475867052584 1.2724542072565566 1.091764335294445 0.982183501739875 0.7625841938805753 1.0 23.519552064014484 -7.4055796150785165 3.312293025109659 0.8792891192327498 1.1197505629800648 0.22909622793197515 0.18016449013902372 0.4198509475350502 8.465024280059371 0.12952198577213264 0.05328343004781379 3.930251887316346e-08 7.4055796150785165 0.24046144374731504 PAAPPRPLDRES(ph)PGVENK ddPTM_KYSE-520_SHP099_60min_R1 3 PAAPPRPLDRESPGVENK 18 2 O00512 O00512 BCL9 B-cell CLL/lymphoma 9 protein 1 PAAPPRPLDRES(1)PGVENK;PAAPPRPLDRES(1)PGVENK;PAAPPRPLDRES(1)PGVENK 139.11 5.8256e-06 1703210000.0 1035960.0 324509.0 398665.0 497960.0 399817.0 559790.0 444402.0 469080.0 364218.0 678580.0 True False 978493.233664939 308919.10054206057 424363.58378655335 545285.9686828672 431280.3232524532 556296.1429664434 489326.4911055604 467452.87096409476 298085.1923886119 672568.3091272514 1.454860748545626 0.45931260267514684 0.6309598267233594 0.8107518021336 0.6412438965673211 0.8271221456870502 0.7275491343630626 0.69502660862906 0.44320433827073696 1.0 19.35932127628363 -4.250613950280893 24.780559301440757 0.6886926415361827 1.4548612426146208 0.6755184079344376 0.15842588722872414 795.342879024609 1820586.344462926 0.03771815356601633 0.5375786869800794 5.615469202211397e-05 4.250613950280893 0.7661686010784381 PAAS(ph)PRPR ddPTM_KYSE-520_SHP099_60min_R1 3 PAASPRPR 8 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;E9PSG1;F8W7E0 P20810-6 CAST Calpastatin 1 PAAS(1)PRPR;PAAS(1)PRPR;PAAS(1)PRPR 109.29 0.00074459 1918930000.0 2243610.0 641690.0 914830.0 1330620.0 846270.0 1354280.0 1045680.0 1124190.0 777720.0 1606920.0 True False 2119152.480774348 610862.249203674 973801.4055797528 1457081.724734508 912866.6343823628 1345827.4361753422 1151387.5392533385 1120290.447277919 636505.652725762 1592683.9389648424 1.3305543108268434 0.3835426692383808 0.6114216272016094 0.9148593070396199 0.5731624536728086 0.845005969640189 0.7229228041325497 0.7033978430183998 0.3996434177263418 1.0 20.6030285681845 -4.243973755614664 24.782305410678276 0.6822699520838224 1.3305549058206783 0.5045575760847267 0.1922685546785784 2703.0317137613524 3835318.739803587 0.04594410961070836 1.3561452211570881 5.701987283091438e-05 4.243973755614664 0.6482849537368559 PADLDLIQSTPFKPLALKT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 PADLDLIQSTPFKPLALKTPPR 22 2 Q9GZY8-5;C9JHF5;A0A0A0MS29;Q9GZY8-4;Q9GZY8-3;Q9GZY8-2;Q9GZY8 Q9GZY8-5 MFF Mitochondrial fission factor 1 PADLDLIQSTPFKPLALKT(1)PPR;PADLDLIQSTPFKPLALKT(1)PPR 77.40100000000001 0.0052751000000000004 420440000.0 466710.0 269124.0 277639.0 419525.0 257180.0 464405.0 341009.0 391247.0 345668.0 431077.0 True False 440820.6659366806 256194.87907664053 295536.05417810654 459396.5298652091 277418.60284596705 461506.47613271215 375481.5176471217 389889.85547473625 282903.4047811658 427257.9931528314 1.0317435203113867 0.5996257136961248 0.6917039795962167 1.0752204457901895 0.649299971660761 1.080158788199967 0.8788168358802614 0.9125396405053833 0.6621371848272725 1.0 18.704747956564283 -5.200841210469299 24.99997731240991 0.8873072677117049 0.7568845394746465 0.08829758980106284 0.17256505673777045 559.0573381859964 230639.55445683433 0.04454214905084228 0.07714925772633889 6.2973638902275056e-06 5.200841210469299 -0.13042272823705836 PAPPQEES(ph)PSS(ph)EAK ddPTM_KYSE-520_SHP099_60min_R1 1 PAPPQEESPSSEAK 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 PAPPQEES(0.988)PS(0.113)S(0.899)EAK 109.55 0.0012047 233140000.0 630710.0 287300.0 318390.0 501120.0 312830.0 409250.0 384230.0 457240.0 326020.0 531240.0 True False 595723.259010786 273497.67675390805 338913.9288420117 548746.2941327788 337447.9412407803 406695.71894642076 423071.718123432 455653.94116061804 266822.98629539245 526533.626898466 1.1314059132744851 0.5194305981271125 0.6436700554879586 1.0421866070836843 0.6408858314112044 0.7724021756066224 0.803503701398002 0.8653843133336742 0.5067539330148902 1.0 19.006166145878648 -10.052233289658206 4.717833030042362 1.000005728598959 0.7665980198967162 0.11167426434168048 0.19486247469664764 1.5250800083929725e-05 3.0637287747493882e-06 0.17809043500435243 0.04319181651590782 8.866795870453387e-11 10.052233289658206 -0.2334077087022428 PAPPQEES(ph)PSSEAK ddPTM_KYSE-520_SHP099_60min_R1 3 PAPPQEESPSSEAK 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 PAPPQEES(0.809)PS(0.191)SEAK;PAPPQEES(1)PSSEAK;PAPPQEES(0.955)PS(0.043)S(0.002)EAK 224.59 1.2423999999999998e-18 1580090000.0 4830300.0 2544220.0 2311520.0 2805360.0 2053230.0 3624530.0 2550530.0 3499440.0 2595560.0 4585800.0 True False 4562353.630035669 2421991.852247922 2460524.2777627665 3071980.5709377625 2214807.5197193553 3601907.963818864 2808362.463174033 3487301.259415437 2124271.732742988 4545173.379698411 1.0037798888847664 0.5328711690220782 0.5413488270333114 0.6758775330021843 0.48728779623942886 0.7924687713580387 0.61787796164563 0.7672537366763406 0.4673686909791638 1.0 22.115903897684202 -10.676394437333608 2.888106188845866 1.040723832667678 0.6492173210943777 0.303878989803252 0.15694688579855035 61171553.0093503 58245582.114003114 18353546.505224764 0.0367026322247631 2.106713909438494e-11 10.676394437333608 -0.3915065115733003 PAPPSPVPS(ph)S(ph)HWMLTK ddPTM_KYSE-520_SHP099_60min_R1 1 PAPPSPVPSSHWMLTK 16 0 H0YBF5 H0YBF5 PRSS55 2 PAPPS(0.198)PVPS(0.879)S(0.879)HWMLT(0.044)K 47.532 0.051484 2668100000.0 2092600.0 2075300.0 1758900.0 1546600.0 2226500.0 1759400.0 1912300.0 2217800.0 2404300.0 1964400.0 True False 1976519.306505321 1975599.4729111914 1872281.5083395042 1693588.3989977553 2401712.8829479143 1748418.9319837089 2105613.946249484 2210106.9694384136 1967739.7274707435 1946996.9442800735 1.015163024426915 1.014690587324827 0.9616252936810867 0.8698464596840858 1.2335473304176026 0.8980080513840809 1.0814675145923567 1.1351363318423842 1.0106537317645046 1.0 20.892819189142298 -5.720498374317978 24.999998226033156 1.0595537130938928 0.9685924737891393 0.20559775237021272 0.09088176824567036 254.75932016795667 155563.6772258752 0.02610237470336995 0.03369766017648752 1.9032753620388467e-06 5.720498374317978 -0.09096123930475353 PAS(ph)LGTGK ddPTM_KYSE-520_SHP099_60min_R1 11 PASLGTGK 8 0 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 PAS(0.992)LGT(0.008)GK;PAS(0.995)LGT(0.005)GK;PAS(0.814)LGT(0.186)GK;PAS(0.999)LGT(0.001)GK;PAS(0.978)LGT(0.022)GK;PAS(0.998)LGT(0.002)GK;PAS(0.999)LGT(0.001)GK;PAS(0.997)LGT(0.003)GK;PAS(0.999)LGT(0.001)GK;PAS(1)LGTGK;PAS(0.997)LGT(0.003)GK 168.9 0.00014327 56040700000.0 72648900.0 27011500.0 31800400.0 35204400.0 22681580.0 35226400.0 26490000.0 28218600.0 24147450.0 42558800.0 True False 68618920.69500826 25713826.994911876 33850304.66643903 38550215.5914112 24466491.30546319 35006538.971030354 29167867.71748616 28120716.26287078 19762881.78767767 42181762.142245345 1.6267438155763034 0.6095958463802367 0.8024867370947905 0.9139071872202057 0.5800253489400771 0.8298975005591587 0.6914805412615593 0.6666557970727277 0.46851721654096096 1.0 25.330116029157676 -4.256990226096785 24.90683510771272 0.7241297309554259 1.6267441957382969 0.7567144330090543 0.15265570506475332 201.64983888472727 1128815.1045724007 0.03652140243263268 0.28135882140024404 5.533625626350085e-05 4.256990226096785 0.902614464782871 PAS(ph)MTFLEVNR ddPTM_KYSE-520_SHP099_60min_R1 5 PASMTFLEVNR 11 0 E7ESL9 E7ESL9 AGAP3 1 PAS(0.997)MT(0.003)FLEVNR;PAS(0.985)MT(0.015)FLEVNR;PAS(1)MTFLEVNR;PAS(0.996)MT(0.004)FLEVNR;PAS(0.998)MT(0.002)FLEVNR 188.26 4.2218e-05 399230000.0 687920.0 457061.0 426050.0 533282.0 387711.0 464396.0 379318.0 522112.0 499692.0 659183.0 True False 649759.7062654792 435103.1034974524 453513.8647041019 583964.9609429203 418221.64992617036 461497.5323050499 417663.16522693203 520300.9153338564 408960.52901023603 653343.1514566134 0.9945152173354155 0.6659641300706988 0.6941434431401068 0.8938104878592267 0.6401255588181415 0.7063631588946051 0.6392707481447715 0.7963669844458575 0.6259505867605224 1.0 19.31748140322616 -10.364327603243154 3.674936697947447 1.0012058055870294 0.735458101685537 0.31297377480012767 0.11559021802562573 153001583.31727976 318825290.1632546 2143098.3528839047 0.027496980495846885 4.3218769402159905e-11 10.364327603243154 -0.2657477039014924 PAS(ph)PDRFAVSAEAENK ddPTM_KYSE-520_SHP099_60min_R1 1 PASPDRFAVSAEAENK 16 1 O15037;G3V331 O15037 KHNYN Protein KHNYN 1 PAS(1)PDRFAVSAEAENK 180.04 6.026100000000001e-09 292980000.0 457040.0 201800.0 215850.0 295590.0 211360.0 265420.0 215040.0 265950.0 204300.0 345960.0 True False 431687.08011334826 192105.22509202475 229764.03637221083 323682.78472762596 227992.82952610418 263763.41532745 236778.34178815497 265027.48152319685 167204.26998389285 342895.0635528068 1.2589480747857638 0.56024494229104 0.6700709948739946 0.9439703837491318 0.6649055462152859 0.7692248835388373 0.6905271231812016 0.7729113355473602 0.4876251884511103 1.0 18.387407609275687 -4.250271689331314 24.741853823497344 0.7246891093974241 1.258948433732509 0.5356123203345835 0.14803872957246578 1080.195723508288 2393106.8472144366 0.034732984268567524 0.5132498313217957 5.619896413315428e-05 4.250271689331314 0.5342593243350848 PAS(ph)PSLQLLPWR ddPTM_KYSE-520_SHP099_60min_R1 6 PASPSLQLLPWR 12 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 PAS(0.997)PS(0.003)LQLLPWR;PAS(0.827)PS(0.173)LQLLPWR;PAS(0.648)PS(0.352)LQLLPWR;PAS(0.836)PS(0.164)LQLLPWR;PAS(0.986)PS(0.014)LQLLPWR;PAS(1)PSLQLLPWR 233.59 3.5833e-15 10243620000.0 6867050.0 3292820.0 3384230.0 4686970.0 3298800.0 4472870.0 3190130.0 3568770.0 3114840.0 5053410.0 True False 6486121.047375214 3134627.9845764134 3602382.8807594497 5132418.219611086 3558396.792395501 4444953.159203112 3512619.473068487 3556390.769827179 2549263.5747265196 5008640.718893487 1.2949862869797004 0.6258440484165768 0.7192336370166497 1.0247127928842426 0.710451595973453 0.8874569785842205 0.7013119267705226 0.7100510836027504 0.5089731361864792 1.0 22.255987696859137 -6.767380856556607 24.496262937916615 0.7059215789145324 0.8576499163031772 0.09703182171582014 0.2097453359886504 264.5665939788866 1090770.6363637333 0.08276446024047403 0.05747868237644083 1.7085163665936444e-07 6.767380856556607 0.15172833738864477 PAS(ph)PTPVIVASHTANK ddPTM_KYSE-520_SHP099_60min_R1 1 PASPTPVIVASHTANK 16 0 P35606-2;P35606;H0YAC7 P35606-2 COPB2 Coatomer subunit beta 1 PAS(0.97)PT(0.03)PVIVASHTANK 101.92 0.0044617 0.0 202260.0 94123.0 78910.0 120990.0 79447.0 145570.0 110830.0 141880.0 106970.0 156330.0 True False 191040.234604686 89601.18979849678 83996.66486046404 132488.85322303 85699.02690840467 144661.4436335501 122033.7779965645 141387.851395041 87546.94449425851 154945.0378228994 1.2329548418520058 0.5782772462898104 0.5421061948203295 0.8550699982690856 0.553093071662984 0.93363069683391 0.7875939733936356 0.912503255229418 0.5650193495988156 1.0 17.24139702721233 -6.30610125767775 24.997074026101018 0.8310211312457423 0.7366637267119972 0.0355385854809368 0.21801992338792062 1742.5097967796187 975270.4725952448 0.07472894135988742 0.06590502495598925 4.941954497002013e-07 6.30610125767775 -0.09435740453374508 PAS(ph)PTPVIVASHTANKEEK ddPTM_KYSE-520_SHP099_60min_R1 1 PASPTPVIVASHTANKEEK 19 1 P35606-2;P35606;H0YAC7 P35606-2 COPB2 Coatomer subunit beta 1 PAS(0.988)PT(0.012)PVIVASHTANKEEK 231.12 5.7521e-20 991510000.0 1178800.0 440070.0 459700.0 765240.0 500110.0 703180.0 653370.0 616200.0 413670.0 832540.0 True False 1113409.6141204596 418928.37664146296 489332.99754600576 837968.1795222042 539465.8117633426 698791.1927886227 719419.0158767055 614062.5460221613 338557.95577208465 825164.3433063178 1.3493186213781165 0.5076908376371132 0.5930127755948797 1.015516710482888 0.653767720502535 0.8468509315231247 0.871849373658215 0.7441699959570462 0.41029154800306855 1.0 19.654321955808356 -7.52600677813864 24.968044105087014 0.6625075027723838 0.8123885593482117 0.031837092222605334 0.26036882704857967 322.07379285774897 2570650.189934662 0.16470697472576024 0.06297458240452633 2.9784699433682386e-08 7.52600677813864 0.14988105657582795 PAS(ph)SAEPAVQK ddPTM_KYSE-520_SHP099_60min_R1 1 PASSAEPAVQK 11 0 Q8WXH2 Q8WXH2 JPH3 Junctophilin-3 1 PAS(0.884)S(0.116)AEPAVQK 61.56 0.031359 531770000.0 18711.0 26761.0 7956.9 4338.2 4754.5 12806.0 8239.9 7653.5 11734.0 0.0 True False 17673.06353054624 25475.361390920072 8469.81450549013 4750.501223672611 5128.652100595495 12726.073003855494 9072.869505674382 7626.951794840326 9603.40139006851 0.0 0.0 PAT(ph)PGASSVEQLR ddPTM_KYSE-520_SHP099_60min_R1 4 PATPGASSVEQLR 13 0 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 PAT(1)PGASSVEQLR;PAT(0.999)PGASSVEQLR;PAT(1)PGASSVEQLR;PAT(1)PGASSVEQLR 193.51 9.3826e-08 1731670000.0 1585880.0 1161040.0 928490.0 1173840.0 932380.0 1394610.0 1191860.0 1303430.0 1309590.0 1617430.0 True False 1497908.0750265992 1105261.895643431 988341.9510365265 1285401.4006721359 1005753.001483485 1385905.7216856882 1312344.840232657 1298908.7055528485 1071801.468077366 1603100.8285415 0.9343816984920374 0.6894525135072118 0.6165188947820077 0.8018219302160757 0.6273797527748259 0.8645156293422818 0.8186290075257633 0.810247666539225 0.6685801971997546 1.0 20.61243373733824 -6.287065093147005 24.610661883836123 0.8196746328577653 0.7286920644902947 0.1525095002455047 0.11379385158899184 1332.5749885765115 1279785.8422222445 0.03907354907319196 0.03447250521016261 5.163389732907623e-07 6.287065093147005 -0.09098256836747065 PAT(ph)PHLLHHR ddPTM_KYSE-520_SHP099_60min_R1 2 PATPHLLHHR 10 0 Q9UPT8 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 PAT(1)PHLLHHR;PAT(1)PHLLHHR 104.24 0.0027553 1011140000.0 527360.0 246600.0 279830.0 364590.0 280970.0 346510.0 310130.0 321890.0 279300.0 336890.0 True False 498106.2895339037 234752.9658458538 297868.28954383056 399240.5239820195 303080.74049938255 344347.3025586414 341480.9669771232 320773.4387196906 228586.1605800353 333905.4166964538 1.4917586377064418 0.7030522839923338 0.8920738468121833 1.195669504052881 0.9076844080517169 1.0312719870360176 1.0226877130524543 0.9606715635023638 0.6845835651352671 1.0 18.34907997178431 -7.537525675320671 24.192159740358 0.8357368627369377 1.0159181011239935 0.11430587884496524 0.20827457871527702 366.3341457957317 605051.427011892 0.13260839134907798 0.0501726701073928 2.900509716619138e-08 7.537525675320671 0.1801812383870558 PAT(ph)STPDLASHR ddPTM_KYSE-520_SHP099_60min_R1 1 PATSTPDLASHR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 PAT(0.494)S(0.494)T(0.012)PDLASHR 116.51 0.00019655 801370000.0 652350.0 351650.0 368820.0 468140.0 312050.0 418940.0 329730.0 398770.0 332050.0 515410.0 True False 616162.8450725161 334756.2061625889 392594.7273328649 512631.8848485773 336606.5596783731 416325.24006209715 363062.326254689 397386.7599436178 271758.09029932256 510843.86838291265 1.2061666650183998 0.6553004291159781 0.7685219528534853 1.0035001231811291 0.6589225798949265 0.8149755058820295 0.7107109407106533 0.777902573640659 0.5319787651745311 1.0 18.96252289528983 -4.252398036282094 24.58091031935866 0.7656241336261118 1.2061669553406587 0.46806040134851357 0.1397404482114562 819.6348214847775 2228301.0500746532 0.03312954044893252 0.3910383837238339 5.592448117319462e-05 4.252398036282094 0.44054282171454684 PATS(ph)TPDLASHR ddPTM_KYSE-520_SHP099_60min_R1 3 PATSTPDLASHR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 PAT(0.004)S(0.937)T(0.059)PDLASHR;PAT(0.002)S(0.935)T(0.064)PDLASHR;PAT(0.001)S(0.942)T(0.057)PDLASHR 273.02 6.3973e-22 1859120000.0 3080290.0 1534060.0 1872490.0 2511470.0 1761190.0 2086820.0 1875380.0 1899210.0 1761330.0 2665340.0 True False 2909420.17329412 1460361.4549289942 1993193.7014899307 2750159.3536990085 1899785.6331996603 2073795.3823134264 2064961.7123450066 1892622.0837889446 1441516.8715160538 2641727.1612031423 1.1013325736368098 0.5528055570522622 0.7545039967648116 1.0410459467912963 0.7191452853649074 0.7850149753424732 0.7816710759049564 0.7164335937428804 0.5456721241642277 1.0 21.333050041395182 PATST(ph)PDLASHR ddPTM_KYSE-520_SHP099_60min_R1 1 PATSTPDLASHR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 PAT(0.062)S(0.215)T(0.722)PDLASHR 176.87 5.514e-05 0.0 336630.0 230330.0 227230.0 258940.0 221080.0 253230.0 203160.0 242340.0 274730.0 287630.0 True False 317956.4628447324 219264.60106762155 241877.6093808548 283549.57974685036 238477.73822686987 251649.4976391011 223697.3954505282 241499.37910258124 224845.9573797107 285081.8219727539 1.1153165103424953 0.7691286647121868 0.8484497808631647 0.9946252545486748 0.8365238322689753 0.8827272672024383 0.7846778651215004 0.8471230379805207 0.7887067503069342 1.0 18.121016524284887 PAVEASTGGEATQETGKEEAGKEEPPPLT(ph)PPAR ddPTM_KYSE-520_SHP099_60min_R1 5 PAVEASTGGEATQETGKEEAGKEEPPPLTPPAR 33 2 Q9C0C2;E9PKK0;E9PKE7 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 PAVEASTGGEATQETGKEEAGKEEPPPLT(1)PPAR;PAVEASTGGEATQET(0.005)GKEEAGKEEPPPLT(0.995)PPAR;PAVEASTGGEATQETGKEEAGKEEPPPLT(1)PPAR;PAVEASTGGEATQETGKEEAGKEEPPPLT(1)PPAR;PAVEASTGGEATQETGKEEAGKEEPPPLT(1)PPAR 186.52 2.2429000000000002e-15 7705920000.0 3539980.0 1825970.0 1866080.0 2490390.0 1739370.0 4226410.0 3089730.0 4748240.0 3783120.0 6843040.0 True False 3343610.2526248246 1738247.660363154 1986370.502633569 2727075.9168369435 1876248.523338474 4200031.407482811 3402070.061258909 4731769.463687548 3096200.77269439 6782415.989404565 0.4929821847919953 0.2562873853621822 0.2928706386834221 0.4020803090074627 0.27663424453314783 0.6192529939248884 0.5016015040324266 0.6976524989147643 0.4565041096758514 1.0 22.693367841957368 -8.710154000717962 0.2574709790687919 1.175910676801548 0.2695495689808322 0.7173213717628812 0.11489707781768528 2.6096021418357496 0.3398683375254479 0.695729595240174 0.21454819553134885 1.949153307909034e-09 8.710154000717962 -0.9063611078207157 PAVVLPSAAPAGAAAPPS(ph)GSR ddPTM_KYSE-520_SHP099_60min_R1 1 PAVVLPSAAPAGAAAPPSGSR 21 0 P19419 P19419 ELK1 ETS domain-containing protein Elk-1 1 PAVVLPSAAPAGAAAPPS(0.5)GS(0.5)R 125.79 5.5572e-07 0.0 188320.0 107190.0 119560.0 74227.0 98151.0 109000.0 72697.0 89505.0 98615.0 118690.0 True False 177873.51419338738 102040.43150452984 127267.02890276379 81281.5117628387 105874.92529720225 108319.69056850299 80045.92221434855 89194.5280456241 80709.0018818481 117638.49893942269 1.512034884812517 0.8674067794513003 1.0818484599017135 0.6909431223250662 0.9000023483104963 0.920784365195629 0.6804398469549308 0.7582086549026297 0.6860764342412153 1.0 16.84400075518494 -1.404854884202327 0.9490110082016376 0.8053976441664984 199.99999992959187 0.6971425971103878 0.13207497256333817 274.7831374021622 1.1373121686129977 0.04102545648777443 117920.26871572316 0.03936815988299681 1.404854884202327 199.19460228542536 PCSEET(ph)PAISPSKR ddPTM_KYSE-520_SHP099_60min_R1 1 PCSEETPAISPSKR 14 1 P33316-2;H0YNJ9 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 PCS(0.037)EET(0.634)PAIS(0.329)PS(0.001)KR 84.17299999999999 0.011008 4871500000.0 8200400.0 3742500.0 4175800.0 4604700.0 2912000.0 5739300.0 3938400.0 5074800.0 4321800.0 7019500.0 True False 7745507.46490788 3562704.6823929707 4444978.749516228 5042329.303546467 3141157.8329864466 5703478.899814763 4336531.907079938 5057196.7032672195 3537070.063712128 6957312.691088363 1.113290117724494 0.5120805748685764 0.6388930535219168 0.724752433508587 0.45149010436313475 0.8197818831860701 0.6233055922058256 0.7268893792491165 0.5083960173649761 1.0 22.730098732309653 -9.631212205093979 6.291109819703381 1.0000000001291305 0.6721714850606686 0.21912165640766224 0.1807706797104384 64764130.300719075 99148976.78690909 0.5416237983742097 0.04063032224511132 2.337694714491744e-10 9.631212205093979 -0.3278285150684619 PCSEETPAIS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 9 PCSEETPAISPSK 13 0 P33316-2;H0YNJ9 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 PCSEETPAIS(0.989)PS(0.011)K;PCSEETPAIS(0.996)PS(0.004)K;PCSEETPAIS(0.997)PS(0.003)K;PCSEETPAIS(1)PSK;PCSEETPAIS(0.999)PS(0.001)K;PCSEETPAIS(1)PSK;PCSEETPAIS(1)PSK;PCSEETPAIS(0.999)PS(0.001)K;PCSEETPAIS(0.996)PS(0.004)K 343.52 2.1826e-51 14371360000.0 13953530.0 7419630.0 6310720.0 7664260.0 5487660.0 11458360.0 7091080.0 9508840.0 7006110.0 13151990.0 True False 13179499.875227565 7063179.837708321 6717519.108709006 8392668.966056217 5919507.621485727 11386844.124977168 7807915.568671657 9475856.053419933 5733977.033660557 13035473.600693395 1.0110487949226876 0.5418429781740044 0.5153260490935812 0.6438330683750367 0.4541075992184013 0.873527458516848 0.5989744452596131 0.7269284065686639 0.43987485298236884 1.0 23.635939663575957 -13.308959536758952 12.737178716883516 0.6761147718695873 0.6603036379037488 0.0 0.20457484580304866 0.0 0.0 0.0 0.043641776716806024 4.909536161975124e-14 13.308959536758952 -0.015811133965838553 PCSEETPAIS(ph)PSKR ddPTM_KYSE-520_SHP099_60min_R1 11 PCSEETPAISPSKR 14 1 P33316-2;H0YNJ9 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 PCS(0.002)EET(0.049)PAIS(0.944)PS(0.005)KR;PCSEETPAIS(0.994)PS(0.006)KR;PCSEETPAIS(0.931)PS(0.069)KR;PCSEETPAIS(0.883)PS(0.117)KR;PCSEETPAIS(0.793)PS(0.207)KR;PCSEET(0.072)PAIS(0.844)PS(0.084)KR;PCSEETPAIS(0.802)PS(0.198)KR;PCSEETPAIS(0.983)PS(0.017)KR;PCSEETPAIS(0.73)PS(0.27)KR;PCSEET(0.001)PAIS(0.953)PS(0.046)KR;PCSEETPAIS(0.995)PS(0.005)KR 278.64 1.6971e-25 137955000000.0 40924400.0 17756600.0 19460080.0 20580440.0 13419710.0 27734620.0 17174120.0 21575040.0 18765300.0 32149490.0 True False 38654241.95123119 16903546.282800023 20714507.89402889 22536398.82986511 14475764.829294842 27561517.948945075 18910247.652858958 21500201.221892215 15357994.554717291 31864670.530524705 1.2130752117522265 0.5304792424138608 0.6500775796249161 0.7072534708393237 0.4542888593631561 0.8649553718919695 0.5934549875462832 0.6747347725216909 0.48197562689390205 1.0 24.92545440807989 -4.253804142975062 24.651947768324234 0.6505132724091407 1.213075541807473 0.5148715517351949 0.16015789511986211 572.3281523772503 1847827.327998086 0.03635420989497703 0.37384583509536345 5.5743708381798923e-05 4.253804142975062 0.5625622693983323 PCSEETPAISPS(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 1 PCSEETPAISPSKR 14 1 P33316-2;H0YNJ9 P33316-2 DUT Deoxyuridine 5-triphosphate nucleotidohydrolase, mitochondrial 1 PCSEETPAIS(0.443)PS(0.557)KR 71.08 0.012853 20433000000.0 5319000.0 2317200.0 2589300.0 2918800.0 1973200.0 3473500.0 2456900.0 2614400.0 2547400.0 3917100.0 True False 5023944.466836379 2205878.233811891 2756210.421026482 3196201.874430779 2128479.614027771 3451820.5980705926 2705267.429033286 2605331.2566055474 2084856.3747281828 3882397.5414576824 1.294031436293897 0.5681742300361322 0.7099248316522571 0.8232546616621684 0.5482384509311773 0.8890950916825933 0.6968033026359192 0.6710624630231328 0.5370022911011334 1.0 21.888516420947347 -4.25292567580466 24.913830192045744 0.7084076484987919 1.2940317457791257 0.5918045392451138 0.14390793047044326 691.9197129960468 2024733.5737662246 0.033420117233740824 0.3795077251369455 5.585657782672654e-05 4.25292567580466 0.5856240972803338 PDERPS(ph)SPIPLLPPPK ddPTM_KYSE-520_SHP099_60min_R1 6 PDERPSSPIPLLPPPK 16 1 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 PDERPS(0.5)S(0.5)PIPLLPPPK;PDERPS(0.5)S(0.5)PIPLLPPPK;PDERPS(0.612)S(0.388)PIPLLPPPK;PDERPS(0.576)S(0.424)PIPLLPPPK;PDERPS(0.5)S(0.5)PIPLLPPPK;PDERPS(0.5)S(0.5)PIPLLPPPK 172.97 1.9612e-08 2128420000.0 4121230.0 2056910.0 1840350.0 2322950.0 1728010.0 3274640.0 2256190.0 2998610.0 2254240.0 3752890.0 True False 3892617.1564316754 1958092.9561151436 1958981.9056641108 2543722.469579615 1863994.555968035 3254201.7570939707 2484267.7034924566 2988208.5217908374 1844926.8407659838 3719642.314304236 1.0465030848429293 0.5264196905667817 0.5266586784784819 0.6838621175475637 0.501121989283719 0.8748695390897212 0.6678781166508861 0.803359105336392 0.4959957664937683 1.0 21.826732465875274 -6.267332197662214 24.975934974609572 0.7498465392361755 0.6439242883200499 0.07267831850713058 0.19074745649406702 1453.5904868672428 6160829.83957058 0.06405905807265919 0.05796925182182219 5.403408508813126e-07 6.267332197662214 -0.10592225091612562 PDERPSS(ph)PIPLLPPPK ddPTM_KYSE-520_SHP099_60min_R1 1 PDERPSSPIPLLPPPK 16 1 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 PDERPS(0.403)S(0.597)PIPLLPPPK 104.03 0.00049464 384230000.0 1403200.0 813820.0 657470.0 747700.0 597720.0 1149400.0 783540.0 1031400.0 842620.0 1390500.0 True False 1325361.6987901505 774722.8656312753 699851.5681891949 818761.1831957981 644757.1634384143 1142226.1682517186 862747.869813482 1027822.3141305705 689621.4487216239 1378181.2517926316 0.9616744510681904 0.5621342364246907 0.5078080747934149 0.5940881739109546 0.4678319071600808 0.8287924151964766 0.6260046482937468 0.7457816689885012 0.5003851618389219 1.0 20.39433420618104 -6.270760120074468 24.985341807089885 0.7171673653855508 0.6080356092128238 0.09924709039637925 0.17482646988890554 1808.0843388161074 4846769.237326533 0.059670613203997365 0.053351578931260635 5.360926832970316e-07 6.270760120074468 -0.10913175617272697 PDLSSKTPT(ph)S(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 PDLSSKTPTSPK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0Y3R8;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 PDLS(0.123)S(0.157)KT(0.264)PT(0.458)S(0.999)PK 62.693999999999996 0.057277 1409900000.0 757970.0 793560.0 462330.0 529250.0 530840.0 859860.0 637580.0 803250.0 724460.0 877440.0 True False 715923.8931242648 755436.1864421567 492132.5315541552 579549.7608751856 572614.0879335601 854493.2947911286 702032.8085811567 800463.7132299597 592916.3261504207 869666.5642379912 0.8232165321332815 0.8686503741857385 0.5658864578579788 0.6664045563060041 0.6584294619114042 0.982552773590695 0.8072436465305337 0.9204259956013514 0.6817743150444546 1.0 19.730102842838853 -6.24770013385926 24.922454733100878 0.8689787445072877 0.7138168618131587 0.3255872048127061 0.11606463108342793 1004.9739183804775 1822984.0488411102 0.03902984056095004 0.03883645725949276 5.653271800195804e-07 6.24770013385926 -0.155161882694129 PEEQLRK ddPTM_KYSE-520_SHP099_60min_R1 4 PEEQLRK 7 1 A0A590UK20;Q9BXX2 A0A590UK20 ANKRD30B Ankyrin repeat domain-containing protein 30B 0 ;;; 100.19 0.012627 3203730000.0 2888900.0 2754940.0 1858560.0 1925830.0 3064430.0 2960690.0 2355730.0 2791010.0 2657530.0 2596800.0 False True 2728646.958120626 2622588.547150755 1978365.751401141 2108860.3041780978 3305583.2067783857 2942211.2354978095 2593870.1781092375 2781328.637736631 2174989.5428795605 2573794.3722798275 1.0601650961353344 1.0189580703868375 0.7686572683150034 0.8193585031076518 1.2843229600546335 1.143141529558806 1.0078000814849972 1.0806335842878438 0.8450517905799088 1.0 21.29546536649496 -4.332405763336896 5.469575203630218 0.9998212452774734 1.0597241583480315 0.016716071774712682 0.1477300253274028 1.2090882070212814 64.13090286365971 0.03990486030845725 0.1754855972014955 4.65151297436669e-05 4.332405763336896 0.05990291307055806 PELS(ph)CLEFS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 PELSCLEFSLR 11 0 E7ESC7 E7ESC7 MAEA 2 PELS(1)CLEFS(1)LR 61.419 0.050174 2205800000.0 4866900.0 4352400.0 3898900.0 4646300.0 3864400.0 4134200.0 4342100.0 3938300.0 5143900.0 4261800.0 True False 4596923.3550753845 4143304.170914411 4150229.3324605655 5087882.955038971 4168506.294571712 4108396.9242963726 4781041.842812258 3924638.9565061275 4209897.42716665 4224043.767630229 1.0882755028019864 0.9808857101968159 0.9825251727419778 1.2045052643697802 0.9868520602262428 0.9726217696369334 1.1318637082907206 0.9291189136299899 0.9966509957657198 1.0 22.01019335265121 -7.28574587957529 24.859683769124715 0.9721637248114666 1.0449991512055297 0.17292826638594638 0.07397360629520848 1407.7016664073267 1439730.5187794482 0.04026215429753852 0.01935490874282325 5.1790978988255994e-08 7.28574587957529 0.07283542639406304 PEPAKSAPAPK ddPTM_KYSE-520_SHP099_60min_R1 3 PEPAKSAPAPK 11 1 P62807;O60814;P57053;Q16778;P06899 P62807;Q16778 HIST1H2BC;HIST1H2BK;H2BFS;HIST2H2BE;HIST1H2BJ Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-J 0 ;; 107.18 0.00069464 4500820000.0 2740460.0 1401450.0 3999870.0 2034430.0 1845660.0 1579840.0 2337600.0 1542850.0 3810130.0 2518960.0 False True 2588441.2208284265 1334122.238380663 4257708.0202182755 2227781.615526316 1990902.9416311053 1569979.6325481064 2573907.42077749 1537498.2134538956 3118306.4375610785 2496643.9741212274 1.0367682567713765 0.53436623411644 1.7053725178083952 0.8923104930531612 0.7974316571636396 0.6288360089871085 1.0309469221311212 0.6158259765472034 1.2489992445393279 1.0 21.25155867437454 -5.49201985266519 24.998013828423964 0.8605211781854548 1.0801307803710267 0.07620646595494118 0.3174295212502189 1710.049797166871 1385268.056886885 0.0873286814338737 0.1293528179586789 3.2209215516997613e-06 5.49201985266519 0.2196096021855719 PERSPPSGGGGYELR ddPTM_KYSE-520_SHP099_60min_R1 2 PERSPPSGGGGYELR 15 1 G3V3E1;G3V5H7;P84550-2;P84550-3;P84550 G3V3E1 SKOR1 SKI family transcriptional corepressor 1 0 ; 59.248000000000005 0.039358 3013100000.0 764870.0 728000.0 602680.0 508650.0 1284440.0 904700.0 630080.0 588100.0 617340.0 556940.0 False True 722441.1363694562 693025.7872497212 641529.7171220946 556991.943068801 1385518.120536096 899053.4317185745 693774.6353882106 586060.0183635714 505246.61787496984 552005.9448927636 1.3087560796284585 1.2554679775855548 1.1621790001676928 1.0090325081136688 2.509969563471379 1.6287024443065203 1.2568245719219346 1.0616914976838216 0.915291986525838 1.0 19.074324278797366 -7.1247150995587205 2.9328293378883177 0.983120546537687 1.4774111301580828 0.2393079655762601 0.38743483437478543 0.45109384920436096 7.383573499855187 0.23210020705090484 0.12101906161322576 7.503863069570124e-08 7.1247150995587205 0.4942905836203958 PFSAPKPQT(ph)SPSPK ddPTM_KYSE-520_SHP099_60min_R1 1 PFSAPKPQTSPSPK 14 1 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PFSAPKPQT(0.629)S(0.371)PS(0.001)PK 141.97 1.4670999999999999e-05 1529100000.0 1661200.0 692590.0 521060.0 715580.0 508410.0 918940.0 609090.0 863560.0 576410.0 1111600.0 True False 1569049.9244799004 659316.9368012154 554648.3613254767 783588.5080530274 548418.9745428031 913204.5545965141 670662.7613455512 860564.5119164201 471748.47411363496 1101752.0888117133 1.4241406396353538 0.5984258559585005 0.5034239253620918 0.7112203516656467 0.49776985232158394 0.8288657347420546 0.6087238391976998 0.7810872524367761 0.42818024027749824 1.0 20.07136820114755 -4.259106958769349 24.91244828073974 0.6501306811623108 1.424140922741431 0.6558984710664486 0.16541552545337357 112.2017993539743 1198341.0867686793 0.0375653935043735 0.243517167667522 5.506720592704133e-05 4.259106958769349 0.7740102415791202 PFSAPKPQTSPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 PFSAPKPQTSPSPK 14 1 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PFSAPKPQT(0.006)S(0.039)PS(0.954)PK 69.737 0.015028999999999999 279120000.0 517450.0 257210.0 224310.0 273440.0 223220.0 324530.0 238140.0 276170.0 269040.0 418380.0 True False 488746.0169889984 244853.2455199192 238769.38150868943 299427.6553872663 240786.14405193547 322504.487891709 262213.5152224296 275212.03072856227 220189.11794648285 414673.47869471496 1.1786285887572185 0.590472403228328 0.5758009464706395 0.7220805543913424 0.5806644418395603 0.7777311655109217 0.6323373176596923 0.6636837050559845 0.53099397299191 1.0 18.66161625406758 -4.256595644400205 24.85601454838431 0.661674735285517 1.1786288184253002 0.5737362232189166 0.12981944747981164 306.5669909867634 1573116.4369939049 0.029397143528999727 0.23421158919031834 5.5386555304420876e-05 4.256595644400205 0.5169540831397832 PFWRILR ddPTM_KYSE-520_SHP099_60min_R1 1 PFWRILR 7 1 F8WDG5 F8WDG5 EPHB1 0 88.734 0.017407 794240000.0 189610.0 181760.0 881990.0 170790.0 421500.0 131590.0 353090.0 145040.0 1071500.0 239570.0 False True 179091.95532183582 173027.9767726777 938844.4866338967 187021.8302501141 454669.65199305885 130768.69799916791 388783.7830263188 144536.89009259065 876942.6103168923 237447.59618263986 0.7542378116310006 0.7286996354327719 3.9539018365625256 0.7876341275161224 1.9148210354731754 0.5507265607295653 1.6373456260524712 0.6087106899217283 3.6932048351517777 1.0 17.857249625482762 -4.608764276532505 22.01138935607342 1.7206880635239312 0.7375814243012093 0.11437799371673163 1.1366054066011129 17.843483545233948 4564.377297571695 0.27697923807524294 0.732819131722171 2.461703388576768e-05 4.608764276532505 -0.9831066392227219 PGFAFCQPLEHDLLS(ph)PVEK ddPTM_KYSE-520_SHP099_60min_R1 2 PGFAFCQPLEHDLLSPVEK 19 0 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 PGFAFCQPLEHDLLS(1)PVEK;PGFAFCQPLEHDLLS(1)PVEK 96.286 0.00049846 127865000.0 102483.0 47165.0 55833.0 73765.0 59048.0 134508.0 133944.0 175454.0 132458.0 221226.0 True False 96798.06369520446 44899.12260389169 59432.08451595859 80775.60342174408 63694.74166283791 133668.48567879086 147484.36668746592 174845.39102527147 108406.9661944516 219266.10975122364 0.44146386235898577 0.2047700059750849 0.27105002493723 0.36839073541000467 0.29049059033840247 0.6096176277786354 0.6726272785830865 0.7974118354343436 0.49440821619651426 1.0 17.742323317582944 -6.405005122503065 2.3157232631784637 0.7267612041335065 0.3046996759583042 0.7032385382898062 0.13145104559051482 0.16962187469809825 1.7872422795417957 0.050827199538246964 0.04268453907494613 3.9354543356032974e-07 6.405005122503065 -0.4220615281752023 PGLRPAPNS(ph)VDVDDFINTR ddPTM_KYSE-520_SHP099_60min_R1 4 PGLRPAPNSVDVDDFINTR 19 1 H3BUU9;P55287 H3BUU9 CDH11 Cadherin-11 1 PGLRPAPNS(1)VDVDDFINTR;PGLRPAPNS(1)VDVDDFINTR;PGLRPAPNS(1)VDVDDFINTR;PGLRPAPNS(1)VDVDDFINTR 215.68 8.511899999999999e-19 1767761000.0 1281891.0 712703.0 750446.0 1299172.0 861663.0 1288040.0 961139.0 1375343.0 1276876.0 1375808.0 True False 1210781.9508436446 678463.678090988 798820.949916054 1422644.9162696945 929470.9759081738 1280000.8645858204 1058300.3099326903 1370572.256140469 1045027.5058245383 1363619.4114824268 0.8879178021728008 0.49754621588542225 0.5858093124735109 1.043285908289542 0.6816205226190798 0.9386789699585587 0.7760965420565435 1.0050988161355694 0.7663630313743196 1.0 20.379009611205742 -5.243343128942419 24.719303790424213 0.8764552661331998 0.6411366003997343 0.345043744659853 0.14430861765661124 752.3584890772718 1027712.6590623491 0.03671176169449185 0.06341721906989775 5.7102729910094285e-06 5.243343128942419 -0.2353186657334655 PGMYPDPHS(ph)PFAVS(ph)PIPGR ddPTM_KYSE-520_SHP099_60min_R1 3 PGMYPDPHSPFAVSPIPGR 19 0 P41162 P41162 ETV3 ETS translocation variant 3 2 PGMYPDPHS(1)PFAVS(1)PIPGR;PGMYPDPHS(1)PFAVS(1)PIPGR;PGMYPDPHS(1)PFAVS(1)PIPGR 166.3 1.0491999999999999e-08 440240000.0 91542.0 85286.0 88881.0 406210.0 486180.0 1461710.0 1408100.0 1796870.0 1413640.0 2209840.0 True False 86463.98277554715 81188.73254310404 94610.41147462814 444816.0762685103 524439.6000142009 1452586.9256962044 1550444.489731683 1790637.0773626105 1156958.6109644158 2190262.536829506 0.0394765382330409 0.03706803690329655 0.0431959228100484 0.20308801743575436 0.23944143279433 0.6632021966640049 0.7078806598116837 0.8175444939831872 0.5282282792633437 1.0 21.062672378822274 -6.15373706289892 1.380114036850373 0.7672217432167479 0.046537185087461304 0.8873270452844787 0.11435492283353918 0.12613946461567993 0.4876234189444537 0.048649994035006826 0.04803546546182455 7.018801126289102e-07 6.15373706289892 -0.7206845581292866 down PGPTPSGTNVGSSGRS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 11 PGPTPSGTNVGSSGRSPSK 19 1 P60468 P60468 SEC61B Protein transport protein Sec61 subunit beta 1 PGPTPSGTNVGSS(0.001)GRS(0.999)PSK;PGPTPSGTNVGSS(0.001)GRS(0.992)PS(0.007)K;PGPTPSGT(0.001)NVGS(0.006)S(0.391)GRS(0.601)PS(0.001)K;PGPTPSGTNVGS(0.002)S(0.115)GRS(0.875)PS(0.008)K;PGPTPSGTNVGS(0.001)S(0.037)GRS(0.91)PS(0.051)K;PGPTPSGTNVGSS(0.005)GRS(0.993)PS(0.002)K;PGPTPSGTNVGS(0.014)S(0.005)GRS(0.981)PSK;PGPTPSGTNVGS(0.002)S(0.013)GRS(0.945)PS(0.04)K;PGPTPSGTNVGSS(0.007)GRS(0.992)PS(0.001)K;PGPTPSGTNVGS(0.002)S(0.011)GRS(0.764)PS(0.223)K;PGPTPSGTNVGS(0.004)S(0.065)GRS(0.93)PS(0.002)K 286.21 2.0168999999999998e-43 44225600000.0 20103200.0 12326220.0 11559630.0 14913050.0 9307430.0 16836740.0 11504580.0 14492460.0 16261140.0 16440080.0 True False 18988035.42126435 11734049.889166588 12304782.245861942 16330381.788228018 10039871.788967395 16731655.660388423 12667575.220280755 14442189.03882558 13308526.88598081 16294433.681388684 1.1653080918640497 0.7201262786180219 0.7551524948004988 1.002206158712984 0.6161534659799084 1.0268325974101897 0.7774173357586226 0.8863265407819165 0.8167529566358392 1.0 23.957875875800138 -10.860676303623157 7.092615930535687 1.0148610003210798 0.8553836068757475 0.0636910555519139 0.15527563144145723 0.03505502929909039 0.0006886022058039351 0.14443740567107913 0.03363012188234737 1.3782363387027771e-11 10.860676303623157 -0.1594773934453323 PGS(ph)LPLNAEACWPK ddPTM_KYSE-520_SHP099_60min_R1 5 PGSLPLNAEACWPK 14 0 Q01581;D6RIW1 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic 1 PGS(1)LPLNAEACWPK;PGS(1)LPLNAEACWPK;PGS(1)LPLNAEACWPK;PGS(1)LPLNAEACWPK;PGS(1)LPLNAEACWPK 153.23 1.7729e-06 1800870000.0 2149870.0 1288370.0 1306680.0 1256960.0 1152770.0 1695510.0 1192910.0 1381230.0 1485620.0 1633130.0 True False 2030612.425440405 1226474.7713172042 1390910.6835619214 1376421.1004811963 1243486.440635918 1684927.6931725005 1313500.9844796702 1376438.835511507 1215868.8574325524 1618661.7387559123 1.2545007871756542 0.7577091259720891 0.8592966956956442 0.850345113821681 0.7682188383544851 1.0409387290932814 0.8114734246385624 0.8503560704223629 0.7511568528005471 1.0 20.62637009801175 -4.253164131123172 24.895853202616202 0.851534793787108 1.2545009992643938 0.6277252606748871 0.09241443788824773 622.6532441554368 1873191.4588454124 0.021870312075000727 0.24115908673596803 5.5825917427597875e-05 4.253164131123172 0.4029662054772859 PGS(ph)PVEVK ddPTM_KYSE-520_SHP099_60min_R1 1 PGSPVEVK 8 0 O43439-3;O43439-2 O43439-3 1 PGS(1)PVEVK 78.932 0.012433 288350000.0 610770.0 379710.0 378540.0 436030.0 388620.0 512340.0 440220.0 487700.0 458780.0 531150.0 True False 576889.3705601905 361468.1616436705 402941.29408541444 477470.16010279977 419202.1830546684 509142.2960171262 484721.73373317363 486008.282530036 375477.116902645 526444.4242284466 1.095821978560559 0.6866216926381846 0.7654013900440916 0.9069716348550502 0.796289529837928 0.9671339890498826 0.9207462581517101 0.9231901035751808 0.7132322038607242 1.0 19.00592171105906 -6.247775639862926 24.74917939109716 0.9010527566368145 0.839572970927018 0.04316076933602131 0.12299872139024019 2354.2817942050933 4264319.96757483 0.03977484100036522 0.03956653714677494 5.652289013458156e-07 6.247775639862926 -0.06147978570979651 PGVGAGHGGDPKLS(ph)PHK ddPTM_KYSE-520_SHP099_60min_R1 2 PGVGAGHGGDPKLSPHK 17 1 Q9GZP8;Q9GZP8-2;K7EQZ3 Q9GZP8 IMUP Immortalization up-regulated protein 1 PGVGAGHGGDPKLS(1)PHK;PGVGAGHGGDPKLS(1)PHK 170.38 1.7085e-08 2464300000.0 3988000.0 1738990.0 2045370.0 2772160.0 2218540.0 2907980.0 2451410.0 2675260.0 2317510.0 3358750.0 True False 3766777.690119095 1655446.310122795 2177217.8229077086 3035625.2529197014 2393126.4762341226 2889830.2181595857 2699222.446256054 2665980.14747038 1896708.6036728898 3328994.0880679563 1.1315062720057922 0.4972812406175116 0.6540167285701902 0.9118746301773948 0.7188737537299197 0.8680791078955483 0.8108222408477145 0.8008365521062344 0.5697542721602368 1.0 21.666654877734878 -5.24482476218379 24.8515707029419 0.8016388997925398 0.7345694209257825 0.007658218456787824 0.1835680152571929 3701.3442465712387 5536334.5454694675 0.047856523612913156 0.0825710788466149 5.690825093062941e-06 5.24482476218379 -0.06706947886675729 PGWLS(ph)SPTLGR ddPTM_KYSE-520_SHP099_60min_R1 1 PGWLSSPTLGR 11 0 C9JS59;C9J266;Q5XPI4;Q5XPI4-2 C9JS59 RNF123 E3 ubiquitin-protein ligase RNF123 1 PGWLS(0.497)S(0.497)PT(0.007)LGR 96.756 0.0032177 199960000.0 529060.0 254770.0 264020.0 315850.0 252660.0 321920.0 256400.0 293150.0 281730.0 335120.0 True False 499711.9871450373 242530.46678243342 281039.15164693614 345868.2890362346 272542.9045612486 319910.77786983893 282319.41422285594 292133.13107172406 230574.9338353506 332151.09751941473 1.5044718830586683 0.7301811392276286 0.8461183893288474 1.041298046639807 0.8205389251959887 0.9631483389909307 0.8499728476927702 0.8795187890494579 0.6941868792767518 1.0 18.34148015592615 -4.253571449198861 24.981893949786652 0.8711089173490517 1.504472193040889 0.7691722930589264 0.10435990400681842 444.08463007354334 1410005.169095714 0.02521019131004618 0.2673324887434109 5.5773583708643584e-05 4.253571449198861 0.6333632756918374 PGWLSS(ph)PTLGR ddPTM_KYSE-520_SHP099_60min_R1 7 PGWLSSPTLGR 11 0 C9JS59;C9J266;Q5XPI4;Q5XPI4-2 C9JS59 RNF123 E3 ubiquitin-protein ligase RNF123 1 PGWLS(0.026)S(0.967)PT(0.007)LGR;PGWLSS(1)PTLGR;PGWLSS(0.997)PT(0.003)LGR;PGWLS(0.008)S(0.854)PT(0.139)LGR;PGWLS(0.05)S(0.943)PT(0.007)LGR;PGWLSS(1)PTLGR;PGWLSS(0.999)PT(0.001)LGR 259.18 9.6085e-15 2757950000.0 7417200.0 3531770.0 3636600.0 4245520.0 3324910.0 4721200.0 3380320.0 3709860.0 3661710.0 4962250.0 True False 7005753.130178381 3362098.467905155 3871021.054765729 4649012.9443378635 3586561.50084992 4691733.239559786 3722035.7343440168 3696991.3615478314 2996835.7681973544 4918288.32557208 1.4244291237975548 0.6835911693961305 0.7870667188498884 0.9452501839239172 0.7292296147425928 0.9539361926314189 0.7567746109945844 0.751682519775375 0.6093249459604977 1.0 22.229724882070318 -4.25493992904512 24.99950119015865 0.7992033631085516 1.424429404562746 0.7076025318879113 0.12004719344073957 398.8149266429054 1533962.6805183184 0.028882718620501013 0.26907098579211874 5.559811544232273e-05 4.25493992904512 0.6252260414541944 PHLGS(ph)VPDFR ddPTM_KYSE-520_SHP099_60min_R1 1 PHLGSVPDFR 10 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YEF9;H0YD72 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 PHLGS(1)VPDFR 84.31 0.0063985 0.0 283290.0 144540.0 185210.0 274620.0 162270.0 228370.0 180610.0 261340.0 175430.0 357050.0 True False 267575.33897538605 137596.0814410369 197148.93294647775 300719.80223248655 175039.72580999698 226944.6581204496 198867.82138373636 260433.4725372145 143576.33423041756 353886.8147806969 0.7561042904104864 0.3888138119141426 0.5570960112448684 0.8497626632934662 0.4946206484648738 0.6412916464861423 0.5619531812932178 0.7359230738749187 0.4057125844583715 1.0 18.43292848484402 -10.706568798566902 3.447657112476812 1.0389317844198136 0.6000969050198449 0.4153409536668454 0.14271374174685486 155296470.0788352 37700135.81747244 48987796.40630546 0.03278408557923355 1.965310622112373e-11 10.706568798566902 -0.4388348793999687 PHS(ph)IDGR ddPTM_KYSE-520_SHP099_60min_R1 2 PHSIDGR 7 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 PHS(1)IDGR;PHS(1)IDGR 109.29 0.0020433 707120000.0 301030.0 103162.0 186543.0 207770.0 163925.0 225890.0 186989.0 221190.0 151602.0 253950.0 True False 284331.26581157267 98205.94267068114 198567.86025935318 227516.39833167172 176824.96489433496 224480.13672035918 205891.67295677692 220422.74351613416 124074.89837541898 251700.20057011014 1.129642587362076 0.3901702996193133 0.7889062456429901 0.9039182242061737 0.702522145369054 0.8918552158953528 0.8180036110039832 0.8757352716321584 0.49294715734983446 1.0 17.941346840563785 -4.977991976178545 24.997835702035562 0.8090726586321465 0.7173145976976654 0.0015068427833325737 0.21098617393859023 970.4694859941051 1102295.6343497143 0.05156775601131238 0.10733409107222515 1.0519813095576808e-05 4.977991976178545 -0.09175806093448113 PHVMSPT(ph)NR ddPTM_KYSE-520_SHP099_60min_R1 1 PHVMSPTNR 9 0 Q9P2R6;B1AKN3;Q9P2R6-2 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 PHVMS(0.412)PT(0.588)NR 73.632 0.034887 0.0 399970.0 230480.0 232620.0 228270.0 198260.0 309370.0 260860.0 265110.0 230470.0 394340.0 True False 377782.86677957245 219407.3948424668 247615.05740516 249964.71216812194 213861.93405490846 307439.1070750256 287230.2745482617 264190.39528713934 188622.45767590654 390846.45439187746 0.9665761644617429 0.5613646801116446 0.6335353810243134 0.6395470890404902 0.5471763441929101 0.7865981733245443 0.7348928749914506 0.6759442034550275 0.4825998945529298 1.0 18.576242424695515 -10.115691604450747 18.590052794752214 1.0000004864884027 0.6665812694589864 0.3655382153900594 0.13044356060848974 0.0 0.0 0.12208917727270402 0.029610974920006933 7.661404554892417e-11 10.115691604450747 -0.33341921702941624 PHWDEK ddPTM_KYSE-520_SHP099_60min_R1 6 PHWDEK 6 0 P50454;E9PR70;E9PPV6;E9PK86;E9PMI5 P50454 SERPINH1 Serpin H1 0 ;;;;; 149.06 0.0098061 3739310000.0 20919800.0 7805350.0 6444330.0 9556840.0 9605370.0 15077180.0 9398130.0 11441060.0 6539790.0 14185790.0 False True 19759336.991412625 7430369.26993079 6859741.823092564 10465119.200231276 10361257.971920704 14983077.727024043 10348184.697309867 11401373.63322349 5352328.99068998 14060114.93697763 1.4053467613871513 0.5284714458762473 0.48788661073115935 0.7443124929731808 0.7369255527684873 1.0656440430383005 0.7359957399846347 0.8109018798444002 0.38067462568272 1.0 23.74510505224431 PIFNSMAPAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 PIFNSMAPASPR 12 0 Q92828 Q92828 CORO2A Coronin-2A 1 PIFNSMAPAS(1)PR 77.192 0.014159999999999999 297510000.0 515000.0 443550.0 469150.0 417760.0 345720.0 359560.0 389860.0 445960.0 572930.0 519180.0 True False 486431.92337295227 422241.19221787644 499392.1596665401 457463.78479587607 372926.19712227886 357315.8526679899 429270.85346693697 444413.06884784665 468900.3543899733 514580.46911592816 0.9452980681693257 0.8205542525609364 0.9704840926522489 0.8890033964596809 0.7247189108498082 0.69438284993963 0.8342152087591725 0.8636415400906448 0.9112284327377692 1.0 18.973037175106818 -10.469794094976868 10.212363338614406 1.0000005934682412 0.8458111914109223 0.22117321648663435 0.08382728500367302 1.2349888660055285e-06 6.410980195615624e-08 0.08849315024975227 0.021462658838078325 3.3900484493153955e-11 10.469794094976868 -0.1541894020573189 PIS(ph)PGLSYASHTVGFTPPTSLTR ddPTM_KYSE-520_SHP099_60min_R1 1 PISPGLSYASHTVGFTPPTSLTR 23 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 PIS(0.986)PGLS(0.012)YAS(0.002)HTVGFTPPTSLTR 124.39 7.0315e-05 544210000.0 32681.0 40213.0 43413.0 56722.0 42080.0 44842.0 32137.0 52053.0 48001.0 69733.0 True False 30868.11978204166 38281.10711905641 46211.471443255956 62112.841825908814 45391.45659755142 44562.124444704656 35385.7215868952 51872.44029226154 39285.228406739276 69115.21987145301 0.4466182678641997 0.5538737660135526 0.668614981319663 0.8986854406515977 0.656750520102153 0.644751250557916 0.5119816106019613 0.7505212366934343 0.5684019884448843 1.0 16.076715821208484 -11.25138972541589 2.2311833469742335 2.307138493339061 0.6407581123569 0.45099054733064114 0.12111157455015846 5101755.856035978 875904.7922688068 33612954.576608755 0.0327412940316552 5.6054473091532545e-12 11.25138972541589 -1.666380380982161 PKFIEDFSQSK ddPTM_KYSE-520_SHP099_60min_R1 1 PKFIEDFSQSK 11 1 C9JBW9;Q6J272-2;Q6J272 C9JBW9 FAM166A Protein FAM166A 0 69.979 0.024207 141960000.0 163880.0 124650.0 96203.0 37295.0 155600.0 142880.0 99003.0 126400.0 144910.0 123610.0 False True 154789.24971331932 118661.62689653544 102404.39931024233 40839.505586849365 167844.8347571056 141988.23292135517 109011.18941616772 125961.54790198177 118597.99688382715 122514.91156712489 1.2634319180691045 0.9685484434400602 0.8358525341965073 0.3333431421894611 1.3699951508771635 1.1589465405079367 0.8897789503479453 1.0281323823424424 0.9680290779857299 1.0 16.902597828029567 PKIES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 PKIESPK 7 1 Q92598-2;Q92598-3;Q92598;Q92598-4;A0A0A0MSM0;Q5TBM3 Q92598-2 HSPH1 Heat shock protein 105 kDa 1 PKIES(1)PK 65.347 0.02256 241670000.0 565740.0 206630.0 249230.0 356350.0 237580.0 319570.0 268790.0 222300.0 222440.0 380770.0 True False 534357.2744252707 196703.18464204663 265295.7645820992 390217.39685946546 256276.19435471186 317575.4450915272 295961.91633760347 221528.89318521012 182050.5032560797 377396.6740345772 1.4159035073433444 0.5212106999756564 0.7029626460295533 1.0339714780414668 0.6790632032205767 0.8414897823461762 0.7842197260871656 0.5869921714384626 0.48238502292524227 1.0 18.525722183080084 -4.249965556565848 24.627846872508652 0.7351744771791265 1.415904004517958 0.5731793181573215 0.17576908720341464 1055.0121040847823 2264467.298204988 0.043964558029293534 0.6697307255049799 5.623859256522444e-05 4.249965556565848 0.6807295273388315 PKPRPS(ph)PSSTREPLLSSSENGNGGR ddPTM_KYSE-520_SHP099_60min_R1 1 PKPRPSPSSTREPLLSSSENGNGGR 25 3 M0QYC1;M0QZR4;Q92888-2;Q92888;Q92888-3;Q92888-4 M0QYC1 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 PKPRPS(0.994)PS(0.003)S(0.003)T(0.001)REPLLSSSENGNGGR 130.87 7.0664e-05 792810000.0 304090.0 76267.0 192910.0 191670.0 106760.0 164650.0 105470.0 134240.0 116450.0 197090.0 True False 287221.52151161374 72603.01884089911 205345.2872669134 209886.25917231318 115161.4046186928 163622.3582761837 116131.93688800572 133774.35277185153 95305.61546561094 195343.93593369995 1.4703375364009108 0.3716676358233137 1.0511986782973797 1.0744447129577082 0.5895315053843226 0.8376116591185988 0.5944998309413664 0.6848144639476025 0.4878862249297456 1.0 17.57565694503816 -5.764984584518692 24.999824544720816 0.6849978419639232 0.9518437202977227 0.19680021045341267 0.2844321948442989 162.22814610341675 1143989.0466485836 0.082954856123162 0.09783104448897387 1.7179693661838986e-06 5.764984584518692 0.26684587833379947 PKPSSS(ph)PVIFAGGQDR ddPTM_KYSE-520_SHP099_60min_R1 3 PKPSSSPVIFAGGQDR 16 1 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 PKPS(0.026)S(0.174)S(0.801)PVIFAGGQDR;PKPS(0.002)S(0.038)S(0.961)PVIFAGGQDR;PKPS(0.032)S(0.197)S(0.771)PVIFAGGQDR 153.82 2.8977999999999996e-06 6070560000.0 6093230.0 1824640.0 2273030.0 3026550.0 2120130.0 3090550.0 2451790.0 2657480.0 1711200.0 3918280.0 True False 5755226.385347142 1736981.5555595239 2419553.1507765884 3314192.4020345616 2286972.169110426 3071260.7310686857 2699640.8603644967 2648261.8221404953 1400489.215841593 3883567.0875757067 1.481943341151294 0.4472644649596678 0.6230233947849682 0.8533887344542891 0.5888844244320895 0.7908349879919035 0.695144643954054 0.6819147866951506 0.36061929258851555 1.0 21.888950957666975 -4.251747441991342 24.835500621307272 0.6673879741857608 1.4819438211199738 0.6545352703481859 0.1766748826281744 719.3078209251296 1843179.6556512017 0.041721962989760275 0.5305450023719104 5.600832155318717e-05 4.251747441991342 0.814555846934213 PKS(ph)PLDPK ddPTM_KYSE-520_SHP099_60min_R1 2 PKSPLDPK 8 1 Q8IYH5;Q8IYH5-4;Q8IYH5-3;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 PKS(1)PLDPK;PKS(1)PLDPK 76.655 0.009909600000000001 670140000.0 1737390.0 607530.0 798480.0 1074710.0 775750.0 1132700.0 868860.0 978480.0 847760.0 1392750.0 True False 1641013.5132988996 578343.3468788792 849951.2984131705 1176850.1152766556 836797.1115862761 1125630.3991462674 956692.8480564374 975085.881258949 693828.1542904793 1380411.3185431042 1.1887859011695419 0.4189645065278564 0.6157232174177006 0.8525358344052927 0.6061940382156803 0.8154311573845002 0.6930491189148882 0.7063734324404566 0.5026242142253299 1.0 20.39666677749093 PLAEGLIKS(ph)PKPLMK ddPTM_KYSE-520_SHP099_60min_R1 1 PLAEGLIKSPKPLMK 15 2 Q9H093 Q9H093 NUAK2 NUAK family SNF1-like kinase 2 1 PLAEGLIKS(1)PKPLMK 47.397 0.062482 210060000.0 485190.0 244730.0 275000.0 249190.0 238960.0 310230.0 240380.0 246900.0 274820.0 339440.0 True False 458275.5434977138 232972.80345278114 292726.94001555716 272872.9426782948 257764.7925035856 308293.73949602427 264679.9562827231 246043.56152689335 224919.61564842594 336432.8256803236 1.3621606113226432 0.6924794064956982 0.8700903053190907 0.8110770467373388 0.7661701618513056 0.916360461773023 0.786724528878821 0.7313304254106359 0.6685424205964468 1.0 18.35995895035036 -4.254662158001913 24.90744841036043 0.8003149101311059 1.3621608820909543 0.7494466742268715 0.09665767744182895 355.6413478442648 1307008.099305172 0.02305574640121773 0.2196551105585358 5.5633686896724946e-05 4.254662158001913 0.5618459719598484 PLAERT(ph)PELVELS(ph)S(ph)DSEDLGSY(ph)EKMETVK ddPTM_KYSE-520_SHP099_60min_R1 8 PLAERTPELVELSSDSEDLGSYEKMETVK 29 2 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 4 PLAERT(0.996)PELVELS(0.541)S(0.541)DS(0.532)EDLGS(0.479)Y(0.524)EKMET(0.388)VK;PLAERT(0.992)PELVELS(0.594)S(0.595)DS(0.58)EDLGS(0.493)Y(0.575)EKMET(0.171)VK;PLAERT(0.996)PELVELS(0.543)S(0.543)DS(0.534)EDLGS(0.477)Y(0.526)EKMET(0.382)VK;PLAERT(0.994)PELVELS(0.543)S(0.543)DS(0.534)EDLGS(0.477)Y(0.526)EKMET(0.383)VK;PLAERT(0.994)PELVELS(0.55)S(0.551)DS(0.539)EDLGS(0.471)Y(0.53)EKMET(0.364)VK;PLAERT(0.993)PELVELS(0.825)S(0.492)DS(0.478)EDLGS(0.414)Y(0.474)EKMET(0.325)VK;PLAERT(0.994)PELVELS(0.55)S(0.55)DS(0.538)EDLGS(0.472)Y(0.53)EKMET(0.366)VK;PLAERT(0.994)PELVELS(0.549)S(0.55)DS(0.538)EDLGS(0.472)Y(0.53)EKMET(0.366)VK 41.748999999999995 0.057034 31535270000.0 6514610.0 5980940.0 4975340.0 3271600.0 5841350.0 5288040.0 5487710.0 6239870.0 7058140.0 6200500.0 True False 6153231.596746938 5693606.664826027 5296058.3772254605 3582531.8803575924 6301031.0122649 5255035.380861165 6042461.281688416 6218225.347366612 5776559.697230116 6145568.393915999 1.0012469477743549 0.9264572940824471 0.8617686823676818 0.5829455716259271 1.0252967029872788 0.8550934663852338 0.9832225262793175 1.011822658018507 0.9399553185265672 1.0 22.55111501867908 -6.639825408637039 1.6770786092920764 0.9874175629372242 0.8631054022771579 0.16207426909132272 0.11511696425641423 0.6968911685788 4.001799587273757 0.061198356858775345 0.04156582523248617 2.2917887929818554e-07 6.639825408637039 -0.12431216066006623 PLGAAPQAEHQGLPVPGS(ph)PGGQK ddPTM_KYSE-520_SHP099_60min_R1 2 PLGAAPQAEHQGLPVPGSPGGQK 23 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 PLGAAPQAEHQGLPVPGS(1)PGGQK;PLGAAPQAEHQGLPVPGS(1)PGGQK 117.73 0.00011817 2394600000.0 2211400.0 992920.0 955890.0 1287480.0 952760.0 2033050.0 1206670.0 1702730.0 1223030.0 2552900.0 True False 2088729.2336833917 945218.6327966944 1017508.1988780758 1409841.7121050223 1027736.7915371469 2020360.9808283923 1328651.9795643298 1696823.6270501686 1000958.5820773375 2530283.292126147 0.8254922443598297 0.37356237372236917 0.40213212569691503 0.5571872985496261 0.40617459504843034 0.7984722450309992 0.5251000880806077 0.6706061856118732 0.3955915075565518 1.0 21.270867488340706 -10.849127733043094 2.7458217126667748 1.1744621706387992 0.5469467908132923 0.4204876589812787 0.1582672100589571 21777279.120245628 14080942.470155068 24869200.312013987 0.03798973669937689 1.4153774332993971e-11 10.849127733043094 -0.6275153798255069 PLKPLS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 2 PLKPLSPLR 9 1 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 PLKPLS(1)PLR;PLKPLS(1)PLR 93.01100000000001 0.0023991999999999998 5506600000.0 10402300.0 3585400.0 4484100.0 4674300.0 3392500.0 6358600.0 4447000.0 5480500.0 3892100.0 7972400.0 True False 9825263.68252905 3413152.002204881 4773152.260813676 5118544.0666204635 3659470.4493154343 6318913.618797087 4896546.158537597 5461489.42465832 3185392.75185663 7901770.738433348 1.2434255571020358 0.43194773870161574 0.604061091977471 0.647771776232943 0.4631203018224979 0.7996832391077335 0.6196770724720388 0.6911728529523431 0.4031239145376907 1.0 22.913744557967842 -9.458070004855607 9.09453378881418 0.9999999972468598 0.6461583761310918 0.16796671145033892 0.22874772115443967 0.0 0.0 0.20687156165951148 0.05017372350933193 3.4828117032498365e-10 9.458070004855607 -0.353841621115768 PLLS(ph)QEDSEEEENELEAINRK ddPTM_KYSE-520_SHP099_60min_R1 1 PLLSQEDSEEEENELEAINRK 21 1 Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 PLLS(0.629)QEDS(0.371)EEEENELEAINRK 52.79 0.042512 168810000.0 58437.0 55474.0 52759.0 49900.0 69690.0 53125.0 47581.0 57330.0 69989.0 52800.0 True False 55195.38311872856 52808.94577182838 56159.92955738468 54642.48099701795 75174.20651814075 52793.42716928184 52390.95182581012 57131.13561092262 57280.76187911244 52332.23307777839 1.054711023638048 1.0091093512738407 1.073142234804263 1.0441457928196178 1.4364800066225656 1.0088128112327635 1.0011220378833148 1.0917007024334675 1.094559863210487 1.0 15.675412201305441 -10.129504829259426 13.424875335702984 0.9999999998668753 1.0913489532007334 0.04832846314933048 0.12030972597333864 0.0 0.0 0.1197565550329244 0.029045230927108333 7.421559450815987e-11 10.129504829259426 0.09134895333385817 PLLSQEDS(ph)EEEENELEAINRK ddPTM_KYSE-520_SHP099_60min_R1 2 PLLSQEDSEEEENELEAINRK 21 1 Q9H1H9-3;Q9H1H9-4;Q9H1H9-2 Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 PLLSQEDS(1)EEEENELEAINRK;PLLSQEDS(1)EEEENELEAINRK 188.69 2.4841e-13 321220000.0 902780.0 668320.0 707960.0 661340.0 565100.0 784680.0 614420.0 720480.0 859020.0 878860.0 True False 852700.9937526871 636212.9040312283 753596.2343760505 724193.5547608784 609570.1550208249 779782.5210577325 676531.569761339 717980.8230412953 703043.6221319803 871073.9841427333 0.9789076579894326 0.7303775748248946 0.8651345902813314 0.8313800755668221 0.6997914828333817 0.8951966598166227 0.7766637301504843 0.8242478091546902 0.8070997813393314 1.0 19.73243573289688 -10.771681022954171 10.768360488973842 1.000629263210417 0.819093823779428 0.32665651051108646 0.0759454819388926 0.0010601523396769198 2.2478088663629336e-05 0.06794692203299402 0.016426419279941578 1.6916829688862808e-11 10.771681022954171 -0.18153543943098904 PLPS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 9 PLPSPPK 7 0 P56945-6;A0A2R8Y6M6;A0A2R8Y5C9;A0A2R8Y8C4;A0A2R8YFS8;A0A2R8Y5E4;A0A2R8Y4C2;A0A2R8YFK2;A0A2R8Y596;P56945;P56945-8;P56945-2;P56945-3;P56945-5;P56945-7;P56945-4 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 PLPS(1)PPK;PLPS(1)PPK;PLPS(1)PPK;PLPS(1)PPK;PLPS(1)PPK;PLPS(1)PPK;PLPS(1)PPK;PLPS(1)PPK;PLPS(1)PPK 73.26 0.026723 13496970000.0 24904970.0 12278730.0 11534610.0 13779850.0 9284260.0 20018910.0 12013000.0 15817610.0 11750520.0 23934950.0 True False 23523441.667273134 11688841.380050534 12278149.416628521 15089482.800937027 10014878.441786658 19893964.55705236 13227391.275581794 15762742.402767934 9616921.77450381 23722904.964109324 0.9915919531297722 0.4927238631919121 0.5175651732030409 0.6360723032767738 0.42216071163874286 0.8385973213293306 0.5575789008805488 0.6644524532984296 0.4053855035482952 1.0 24.49977734866135 -10.30816430117768 3.771925072546741 1.000959927469483 0.6090451551638036 0.3058692118527332 0.17429507729236374 255655052.3069938 420540286.3880345 2774242.5582333035 0.041034933760340835 4.918534237496243e-11 10.30816430117768 -0.3919147723056793 PLPS(ph)S(ph)MQLAVIR ddPTM_KYSE-520_SHP099_60min_R1 1 PLPSSMQLAVIR 12 0 Q5H8C1-3;Q5H8C1-2;Q5H8C1 Q5H8C1-3 FREM1 FRAS1-related extracellular matrix protein 1 2 PLPS(1)S(1)MQLAVIR 110.58 0.00075229 205680000.0 39453.0 56708.0 57910.0 66837.0 74010.0 99001.0 65495.0 90507.0 120690.0 92842.0 True False 37264.46344239434 53983.662559556644 61642.971259276084 73189.16838472315 79834.16594070305 98383.09803644377 72115.87376960213 90193.05234149272 98775.73834731278 92019.49210998304 0.40496271591952837 0.5866546458986601 0.6698903661150347 0.7953659241810027 0.8675788586757694 1.0691549777177085 0.7837021495772677 0.9801515991165509 1.0734219031469396 1.0 16.489651873238696 -4.308318481065097 0.4882607761558226 1.0057259561041267 3.3743013291753147e-19 0.8660318158648868 0.07657371267126295 1.5389020609428372 0.2928865239823879 0.05128769720315599 0.8925821798991025 4.9167884072067356e-05 4.308318481065097 -1.0057259561041267 down PLPTFPTSECTS(ph)DVEPDTR ddPTM_KYSE-520_SHP099_60min_R1 2 PLPTFPTSECTSDVEPDTR 19 0 Q8TDD1;H0YHZ9;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 PLPTFPT(0.001)S(0.001)ECT(0.05)S(0.948)DVEPDTR;PLPT(0.001)FPT(0.043)S(0.043)ECT(0.06)S(0.854)DVEPDTR 138.81 3.2488e-06 357010000.0 589220.0 301020.0 318020.0 389910.0 307730.0 415840.0 341910.0 375140.0 309040.0 478130.0 True False 556534.7920190503 286558.5473597681 338520.07804999076 426966.9291692838 331946.6002558105 413244.58831198374 376473.599520034 373838.72689833416 252926.126264426 473894.14017951075 1.174386312960602 0.6046889443520445 0.7143369148260824 0.9009753296538949 0.7004657203190344 0.8720187765044889 0.7944255216522114 0.7888654769116249 0.533718619455007 1.0 18.854205296229804 -4.2467466500312705 24.600797034319896 0.7656116795761637 1.1743866720988385 0.4631183866649565 0.13133860289899724 1878.7217160829364 3145578.3840612886 0.031115203501874494 0.6690964896862385 5.665697066781972e-05 4.2467466500312705 0.4087749925226748 PLS(ph)ADLTK ddPTM_KYSE-520_SHP099_60min_R1 4 PLSADLTK 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 PLS(0.994)ADLT(0.006)K;PLS(1)ADLTK;PLS(0.996)ADLT(0.004)K;PLS(0.999)ADLT(0.001)K 137.46 0.00068198 1559190000.0 4827790.0 2263050.0 2568200.0 3461020.0 2485950.0 3419330.0 3026510.0 3698240.0 2733480.0 4458390.0 True False 4559982.864739238 2154329.681092697 2733750.2812652905 3789954.300206389 2681580.1218793504 3397988.693133936 3332459.1666911715 3685411.668615707 2237148.9374232544 4418892.13317493 1.0319289829468945 0.4875271032119159 0.6186506026570778 0.8576706979908434 0.606844439977914 0.7689684632995364 0.7541390616151639 0.8340125890259683 0.506269189199666 1.0 22.075253284118357 -10.094524808807959 4.239216717907314 1.0000384367285309 0.7154660690254331 0.21797818155780635 0.1598980037381541 69641684.43133026 107589873.45147096 36004.29270331228 0.037538152263882935 8.044057960481173e-11 10.094524808807959 -0.2845723677030978 PLSS(ph)SPLVR ddPTM_KYSE-520_SHP099_60min_R1 1 PLSSSPLVR 9 0 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 PLS(0.075)S(0.462)S(0.462)PLVR 126.55 0.0007312 0.0 236880.0 116520.0 120070.0 149830.0 103140.0 181580.0 150200.0 158300.0 140370.0 211660.0 True False 223739.79419142698 110922.2042999142 127809.9043187926 164069.79815196773 111256.53121367544 180446.69186631904 165383.68181073698 157750.89424749772 114882.34643974072 209784.85706898832 1.0665202308565558 0.5287426645071771 0.6092427551944894 0.7820859924985574 0.5303363301245734 0.860151177675225 0.7883489977370011 0.7519651153639794 0.5476198236842298 1.0 17.678551017843244 PLTS(ph)PESLSR ddPTM_KYSE-520_SHP099_60min_R1 1 PLTSPESLSR 10 0 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 PLT(0.029)S(0.971)PESLSR 177.47 2.2621e-05 217030000.0 597740.0 309770.0 325820.0 354170.0 289500.0 448810.0 331390.0 418490.0 336190.0 516910.0 True False 564582.1706348514 294888.1842257503 346822.8785304326 387830.2103149063 312282.0029703217 446008.8103123841 364890.1352547281 417038.35586630064 275146.3706602296 512330.579549894 1.1019880389159336 0.5755818528045371 0.676951352064779 0.7569921175808655 0.609532234528487 0.8705488762826208 0.7122161936445427 0.8140024673769971 0.5370485027498424 1.0 18.966715479148185 -9.147758256995765 10.964608529640886 0.9999999999999999 0.7347179412390735 0.19973708208992313 0.15621517620518932 0.0 0.0 0.14069599826189774 0.0341237918785602 7.116095093630728e-10 9.147758256995765 -0.26528205876092636 PLTS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 7 PLTSPLR 7 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 PLT(0.146)S(0.854)PLR;PLT(0.078)S(0.922)PLR;PLT(0.022)S(0.978)PLR;PLT(0.021)S(0.979)PLR;PLT(0.079)S(0.921)PLR;PLT(0.071)S(0.929)PLR;PLT(0.042)S(0.958)PLR 123.21 0.0023835 12634080000.0 20261200.0 8536690.0 9625220.0 11036900.0 8224260.0 13539500.0 10168770.0 12813800.0 9325130.0 17819500.0 True False 19137270.84629916 8126574.598567081 10245677.082096508 12085843.657635028 8871462.47236165 13454994.958277468 11196728.509231482 12769351.918563403 7631921.459397448 17661633.09336124 1.0835504703974737 0.4601258873179596 0.5801092700735423 0.6842993280263492 0.5023013684785643 0.7618205455380573 0.6339577121800913 0.7229995012954507 0.43211867323108305 1.0 24.074115413016894 -10.536076061537718 5.838157789817182 1.0006946828212506 0.6449841730175558 0.2555793346320475 0.17826840252097373 0.0015022699082087808 0.00011937652768155017 0.16086791243835008 0.038943416430140806 2.9102073850559777e-11 10.536076061537718 -0.3557105098036948 PLTYPQYS(ph)PPQPR ddPTM_KYSE-520_SHP099_60min_R1 7 PLTYPQYSPPQPR 13 0 P15407;E9PPX2;E9PKL5 P15407 FOSL1 Fos-related antigen 1 1 PLTYPQY(0.001)S(0.999)PPQPR;PLTYPQYS(1)PPQPR;PLTYPQYS(1)PPQPR;PLTYPQYS(1)PPQPR;PLTYPQYS(1)PPQPR;PLTYPQY(0.007)S(0.992)PPQPR;PLTYPQYS(1)PPQPR 193.47 1.9919e-08 14883600000.0 4480880.0 2435850.0 2398120.0 2736610.0 2154020.0 3454810.0 2336690.0 2751770.0 2334290.0 3874720.0 True False 4232316.653987177 2318828.1097146096 2552706.652327667 2996696.5916082044 2323529.1193027026 3433247.2492933027 2572905.4290967453 2742224.7521379455 1910441.778662265 3840392.995286547 1.1020530084243074 0.6037996925212058 0.664699330370797 0.7803098785166409 0.6050237884910357 0.8939833119962074 0.6699588902111229 0.7140479517339962 0.4974599685519214 1.0 21.87282252176547 -4.251946240309114 24.389238035334127 0.7067459871860876 1.1020533071910992 0.4094020120262829 0.13942306532557813 855.1789239071464 2197013.6989762667 0.03221903959525596 0.3949191650057207 5.5982689608546496e-05 4.251946240309114 0.39530732000501156 PLWLS(ph)PEKPLAWK ddPTM_KYSE-520_SHP099_60min_R1 4 PLWLSPEKPLAWK 13 1 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 PLWLS(1)PEKPLAWK;PLWLS(1)PEKPLAWK;PLWLS(1)PEKPLAWK;PLWLS(1)PEKPLAWK 179.17 1.4716e-07 1181160000.0 4841270.0 1806208.0 2224537.0 2867180.0 2051644.0 3094290.0 2181894.0 2334216.0 1979581.0 3214380.0 True False 4572715.102267523 1719435.0565065201 2367934.2144050477 3139675.9251508974 2213096.710542461 3074977.3883414003 2402461.138753372 2326119.14950611 1620138.991576037 3185903.0939497957 1.4352963562988967 0.5397009908342226 0.7432536849290502 0.9854900894861849 0.6946528645975619 0.9651823353261908 0.7540910906285182 0.7301286576869014 0.508533669668977 1.0 21.603270954202372 -4.24879588867192 24.78508308290715 0.7698718426601988 1.4352968278853127 0.5993657265942018 0.16342205193614576 1258.499954229519 2466994.9015709213 0.03979157103550573 0.6907300536060486 5.6390261859687295e-05 4.24879588867192 0.6654249852251138 PMEEDGEEKS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 PMEEDGEEKSPSK 13 1 Q12906;Q12906-5;Q12906-2;Q12906-3;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 PMEEDGEEKS(0.675)PS(0.325)K 113.29 9.4026e-05 932000000.0 1436200.0 879930.0 944640.0 1045800.0 758160.0 1153800.0 942470.0 1018500.0 1051300.0 1244800.0 True False 1356531.1230062786 837656.8419981424 1005533.0058774407 1145192.5175687638 817822.8786596871 1146598.7062196203 1037744.0652208093 1014967.0612196873 860410.4211163303 1233772.0404397452 1.099498998634123 0.6789397186368253 0.815007126858739 0.9282043035766886 0.6628638450650867 0.9293440511189942 0.8411149152406899 0.8226536409902184 0.6973820064925932 1.0 20.23464442693318 -4.24248789089938 24.310161783634612 0.8164286512642741 1.0994993662847765 0.37742376892213747 0.10781919064755144 3055.379578028349 3919224.6395293125 0.02517771176741187 0.8575929554718073 5.721529073315038e-05 4.24248789089938 0.2830707150205024 PMEEDGEEKS(ph)PSKK ddPTM_KYSE-520_SHP099_60min_R1 2 PMEEDGEEKSPSKK 14 2 Q12906;Q12906-5;Q12906-2;Q12906-3;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 PMEEDGEEKS(0.549)PS(0.451)KK;PMEEDGEEKS(0.884)PS(0.116)KK 110.74 0.00010542 1973390000.0 4537400.0 2009170.0 2388700.0 3365600.0 2231270.0 3137500.0 2554400.0 3030900.0 2457200.0 3711400.0 True False 4285701.376917351 1912646.4573743467 2542679.424055132 3685465.6120954603 2406858.254810328 3117917.698703465 2812623.680541587 3020386.515317376 2011034.4209712234 3678519.8834255086 1.1650613596592614 0.5199500119578675 0.6912235096272852 1.001888185707857 0.654300732654737 0.8476011541359402 0.7646074425788933 0.8210874512127779 0.5466966292699523 1.0 21.810693958871852 PMEEDGEEKSPS(ph)KK ddPTM_KYSE-520_SHP099_60min_R1 1 PMEEDGEEKSPSKK 14 2 Q12906;Q12906-5;Q12906-2;Q12906-3;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 PMEEDGEEKS(0.393)PS(0.607)KK 94.20299999999999 0.0012857 675290000.0 1587000.0 694210.0 809080.0 1087300.0 780310.0 958890.0 861120.0 902900.0 838690.0 1086400.0 True False 1498965.9463939313 660859.1095695455 861234.5913737718 1190636.6650913358 841715.9576434265 952905.2118278157 948170.4133213181 899768.0506384441 686405.0376543861 1076775.3412064097 1.3920879212505952 0.6137390821274981 0.7998275577232777 1.1057428783216348 0.7817006254065729 0.8849619557225271 0.8805647538872837 0.8356135362742908 0.6374635556618002 1.0 20.03828584619172 -4.245898294916769 24.481175880349237 0.8408516655567804 1.392088463563209 0.5837245463316805 0.14041885389334252 1601.0468818809463 2522004.5679914784 0.03458954872346433 0.8093431193482412 5.676775311837659e-05 4.245898294916769 0.5512367980064286 PMFIVNTNVPR ddPTM_KYSE-520_SHP099_60min_R1 2 PMFIVNTNVPR 11 0 P14174 P14174 MIF Macrophage migration inhibitory factor 0 ; 196.52 0.00012977 0.0 1564930.0 808230.0 505060.0 2810700.0 882450.0 993390.0 881460.0 783160.0 512660.0 966730.0 False True 1478120.2132893887 769401.4176220361 537616.975724572 3077828.0829322306 951893.7945463228 987189.8845306895 970566.5790205874 780443.4007509187 419573.86710691365 958165.5243045595 1.5426564364880635 0.8029942615400099 0.5610898765271027 3.2122091693563397 0.9934544401784976 1.0302915931432577 1.012942497304971 0.8145183488180372 0.43789288642110363 1.0 19.869915379318467 -5.975014958724663 24.99978929606287 0.8743399514288793 1.4954118857992764 0.18259761905192107 0.6749378813570748 445.7642256468841 446025.20695699897 0.21725212247469305 0.24633216995872284 1.0592172411495044e-06 5.975014958724663 0.6210719343703971 PMS(ph)SEELPLASSWR ddPTM_KYSE-520_SHP099_60min_R1 6 PMSSEELPLASSWR 14 0 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 PMS(0.967)S(0.033)EELPLASSWR;PMS(0.97)S(0.03)EELPLASSWR;PMS(0.979)S(0.021)EELPLASSWR;PMS(0.977)S(0.023)EELPLASSWR;PMS(0.978)S(0.022)EELPLASSWR;PMS(0.979)S(0.021)EELPLASSWR 159.41 4.4377e-08 795156000.0 865183.0 694365.0 581687.0 682418.0 606571.0 710038.0 640527.0 740633.0 790784.0 816690.0 True False 817189.5742904485 661006.6631368861 619183.4747521069 747274.8015435461 654304.6867831129 705606.3894667772 705277.7201011049 738063.9169880411 647197.5596424019 809454.7619752057 1.0095555831883285 0.8166072944260884 0.7649389488316742 0.9231829086038977 0.808327676257657 0.8717057735814402 0.8712997356147596 0.9118037865229689 0.7995475350137308 1.0 19.626590929272595 -10.581030737156253 5.503773713382834 1.000683628579871 0.8617286426458859 0.26292015809163305 0.06815455553562878 0.0005503227257855665 4.189271678597367e-05 0.0635214760090521 0.015331571983953572 2.624032821105092e-11 10.581030737156253 -0.13895498593398514 PNAGFMRQLS(ph)EYEGILDASK ddPTM_KYSE-520_SHP099_60min_R1 1 PNAGFMRQLSEYEGILDASK 20 1 Q8WYL5-4;Q8WYL5;Q8WYL5-2;Q8WYL5-5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 PNAGFMRQLS(0.862)EY(0.138)EGILDASK 67.979 0.013341999999999998 6612600000.0 2901000.0 2430000.0 2060200.0 3234800.0 2500600.0 2579100.0 2618200.0 2673800.0 2910000.0 2604000.0 True False 2740075.746999874 2313259.152495636 2193003.7884365483 3542234.4194219136 2697382.9935322525 2563002.880231434 2882873.207169583 2664525.211869608 2381617.355130334 2580930.5858813426 1.0616619299988597 0.8962887902332711 0.8496949900292169 1.372464040218386 1.0451203175660546 0.9930537823264292 1.1169898264370146 1.0323893352442564 0.9227746643627973 1.0 21.299459909999985 PNS(ph)VAATSSTK ddPTM_KYSE-520_SHP099_60min_R1 4 PNSVAATSSTK 11 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 PNS(0.745)VAAT(0.24)S(0.013)S(0.002)TK;PNS(0.999)VAAT(0.001)SSTK;PNS(0.999)VAAT(0.001)SSTK;PNS(0.984)VAAT(0.014)S(0.002)STK 187.63 9.378e-07 2583080000.0 5696930.0 2923790.0 3224300.0 3788460.0 2470960.0 4466020.0 3324590.0 4390600.0 3509590.0 5741790.0 True False 5380909.9363515945 2783326.7397017376 3432143.537062408 4148514.099357964 2665410.494160782 4438145.912593996 3660672.0020716297 4375370.033373739 2872336.925564219 5690922.2076450195 0.9455251258087901 0.48908184616593375 0.6030909247804804 0.7289704459120827 0.46836178687878516 0.7798640977084381 0.643247591252256 0.7688332178387527 0.5047225776000953 1.0 22.44023102793515 -11.007762690263224 3.739882474624914 1.3686449882257723 0.6551924338783061 0.3362825465132271 0.1435933009503572 0.0769823752422157 0.00015978857136270369 0.024249865779101855 0.03124398064708297 9.82284542078783e-12 11.007762690263224 -0.7134525543474662 PPGCS(ph)S(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 PPGCSSR 7 0 H0YHV6 H0YHV6 WDR90 2 PPGCS(1)S(1)R 67.494 0.049961 0.0 97181.0 85641.0 89612.0 89001.0 80478.0 103110.0 84803.0 78831.0 109740.0 114710.0 True False 91790.17620447937 81526.67781023816 95388.53290426958 97459.62828087369 86811.1607428171 102466.45224328752 93375.71483752297 78557.55366029363 89813.982320276 113693.75864302948 0.8073457795750953 0.7170725885333068 0.8389953331014958 0.8572117717285873 0.7635525624179851 0.901249580155117 0.8212914759085397 0.6909574861267899 0.7899640524883155 1.0 16.794793532344208 -11.114073436237518 2.4424241963899096 1.3825278362562008 0.7986250782835262 0.5052894565779553 0.05977623027979721 13059564.567247242 3134466.370005947 27784985.104463983 0.016220243984370854 7.690003965652327e-12 11.114073436237518 -0.5839027579726745 PPNKPQK ddPTM_KYSE-520_SHP099_60min_R1 1 PPNKPQK 7 1 Q9UBI9 Q9UBI9 HECA Headcase protein homolog 0 60.151 0.041444 1013600000.0 4559300.0 3730700.0 2827500.0 1194200.0 4324300.0 4632600.0 2913400.0 3943500.0 3920100.0 3921700.0 False True 4306386.540260781 3551471.5721051353 3009765.1741599534 1307696.4089506785 4664597.8080986645 4603686.225024288 3207914.9040439515 3929820.9189198143 3208308.657679188 3886956.789036427 1.1079069755566615 0.9136894915123411 0.7743243204167627 0.3364319388986198 1.2000642305197877 1.1843934663769538 0.8253024353376438 1.0110276836635514 0.8254037366014878 1.0 21.89020963877402 PPTLS(ph)PIPHIPR ddPTM_KYSE-520_SHP099_60min_R1 1 PPTLSPIPHIPR 12 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 PPT(0.021)LS(0.979)PIPHIPR 113.35 0.00011015 421350000.0 523700.0 150820.0 177830.0 135210.0 97919.0 178280.0 110840.0 176370.0 168250.0 282720.0 True False 494649.317029932 143574.3808145647 189293.2063380603 148060.3177476312 105624.6682171017 177167.2883903919 122044.78889415515 175758.21363506734 137700.04123734674 280215.3207528314 1.765247223817022 0.5123716306047622 0.675527682888651 0.5283805230558049 0.37694108920714475 0.6322541105690123 0.4355393151461793 0.6272255676915603 0.4914079675136941 1.0 18.09617631161124 -4.259881386641045 24.99027351190319 0.566087856261343 1.7652476212337398 0.8213675427979057 0.16464398996735363 48.28214909496404 774376.1028515853 0.03729371405135137 0.22988150605457683 5.49690983503837e-05 4.259881386641045 1.1991597649723968 PPY(ph)GHVDIHEDPGPPPPSPLVGLK ddPTM_KYSE-520_SHP099_60min_R1 1 PPYGHVDIHEDPGPPPPSPLVGLK 24 0 Q13705 Q13705 ACVR2B Activin receptor type-2B 1 PPY(0.521)GHVDIHEDPGPPPPS(0.479)PLVGLK 54.271 0.049868 466580000.0 335470.0 457140.0 303030.0 330490.0 320340.0 443490.0 306740.0 403170.0 490510.0 396570.0 True False 316860.81035713456 435178.3082188703 322563.7986651426 361899.67023455823 345548.935514725 440722.01440573705 337748.27269391104 401771.4973705858 401445.7487508524 393056.69832679094 0.8061453009349139 1.1071642082971427 0.8206546282973153 0.9207314664147297 0.8791325449628451 1.1212682961055067 0.8592863933668522 1.0221718624333156 1.0213431051035968 1.0 18.5843779103174 PQALSTNLQLAR ddPTM_KYSE-520_SHP099_60min_R1 1 PQALSTNLQLAR 12 0 Q6ZMU5-2;Q6ZMU5 Q6ZMU5-2 TRIM72 Tripartite motif-containing protein 72 0 53.967 0.058214999999999996 0.0 63153.0 84724.0 42122.0 45737.0 96823.0 106590.0 67309.0 89855.0 83904.0 72697.0 False True 59649.777197615666 80653.73186668337 44837.25151758291 50083.830728669534 104442.41925248856 105924.73227244703 74113.25059253597 89543.3139773147 68669.1486477168 72052.96113741017 0.8278601775138604 1.119367345817626 0.6222818716926158 0.6950974663366863 1.4495229287427809 1.470095476998384 1.0285940983216038 1.2427430124148426 0.9530371488377806 1.0 16.136770101142712 -5.751024548774585 24.99997463976703 1.208670543457379 0.8239621016089969 0.44720853394816873 0.20332090993024346 203.30324603531466 488010.9159386413 0.06284559846280129 0.08023755181401944 1.7740891965243459e-06 5.751024548774585 -0.38470844184838215 PQDQDKLS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 3 PQDQDKLSK 9 1 Q8N1G2 Q8N1G2 CMTR1 Cap-specific mRNA (nucleoside-2-O-)-methyltransferase 1 1 PQDQDKLS(1)K;PQDQDKLS(1)K;PQDQDKLS(1)K 73.632 0.035571 2462800000.0 3884110.0 4425030.0 3685340.0 2877750.0 3273550.0 3323810.0 2628370.0 2670210.0 4992100.0 3040010.0 True False 3668650.6755186752 4212444.916694557 3922902.9131524847 3151250.4947729134 3531159.761048348 3303064.868885286 2894071.2900192207 2660947.6647416977 4085660.4806000567 3013077.8764919946 1.217575789906213 1.3980537806739126 1.3019586860860572 1.0458576326084832 1.1719444056187274 1.0962427803993278 0.9605033154299588 0.8831327213618959 1.3559757324815072 1.0 21.522806530864866 -5.249868678160221 11.221250150682781 1.068856628494131 1.315173523238174 0.411288968879434 0.12723494822489392 0.514723945602172 489.44665668061896 0.03446442842256956 0.05750401427306551 5.625113915085589e-06 5.249868678160221 0.24631689474404306 PQT(ph)SPS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 3 PQTSPSPKR 9 1 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 2 PQT(0.994)S(0.007)PS(0.999)PKR;PQT(0.971)S(0.03)PS(0.999)PKR;PQT(0.793)S(0.337)PS(0.87)PKR 113.38 0.0024304 2094020000.0 7431500.0 2708050.0 3657600.0 4861700.0 3155080.0 4554770.0 4117640.0 4126060.0 3238120.0 5033000.0 True False 7019259.880672025 2577951.213134079 3893374.7483669166 5323754.506276594 3403366.846050442 4526341.990923859 4533891.23549377 4111747.66088964 2650159.0343624214 4988411.53561475 1.407113232450458 0.5167879984898606 0.7804838715832041 1.067224399644589 0.6822546258968639 0.9073714064302941 0.9088847628396466 0.824259913508304 0.5312631116020838 1.0 22.250149059331253 -4.242568369257009 24.296771286767108 0.8070646726243854 1.407114015523149 0.5213882703955521 0.17385130464644616 2358.0304572290456 3035940.222892393 0.04232451017031578 1.4121740672190402 5.720468924910403e-05 4.242568369257009 0.6000493428987635 PQTS(ph)PS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 1 PQTSPSPKR 9 1 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 2 PQT(0.379)S(0.636)PS(0.985)PKR 67.87899999999999 0.029155 494220000.0 1742800.0 676580.0 858810.0 1195700.0 831510.0 1075400.0 976120.0 1074200.0 806790.0 1214900.0 True False 1646123.4098143335 644076.0812327161 914170.2667445848 1309338.9684996856 896945.106355275 1068688.0297006248 1074795.7356131598 1070473.8509201652 660297.2735208258 1204136.9311778988 1.3670566587506614 0.5348860786145596 0.7591912871988191 1.087367171123036 0.7448863024887663 0.8875137054846607 0.8925859740567743 0.8889967770301812 0.5483572975997973 1.0 20.19956803010821 PQTS(ph)PSPK ddPTM_KYSE-520_SHP099_60min_R1 2 PQTSPSPK 8 0 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PQT(0.122)S(0.827)PS(0.051)PK;PQT(0.228)S(0.765)PS(0.007)PK 89.301 0.0045436999999999995 3302400000.0 7045500.0 2189400.0 2406900.0 3737700.0 2462400.0 5230400.0 4434300.0 2935400.0 2710000.0 6324200.0 True False 6654672.070143949 2084217.937643603 2562052.625176162 4092929.884219518 2656176.870860523 5197755.13348163 4882562.318597551 2925217.782527509 2217932.3135406203 6268172.508153147 1.0616606453456847 0.33250806912742364 0.40873996716645 0.6529702044568422 0.42375618530051246 0.829229751848852 0.7789451091600778 0.4666779318409976 0.35384034352208843 1.0 22.579613454500386 -6.24780426813821 24.778959758240507 0.658231418500905 0.5573957660503803 0.03686452543586971 0.2537547595720748 3063.2745107338014 5566861.053539236 0.08389133533764828 0.08343297319442533 5.651916432273347e-07 6.24780426813821 -0.10083565245052473 PQTS(ph)PSPKR ddPTM_KYSE-520_SHP099_60min_R1 1 PQTSPSPKR 9 1 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 PQT(0.158)S(0.529)PS(0.313)PKR 43.501000000000005 0.066537 700820000.0 1054100.0 478710.0 658950.0 562580.0 474410.0 611490.0 420760.0 400500.0 519960.0 600680.0 True False 995626.9717037453 455712.05304164125 701426.9713572783 616047.434054155 511743.3679763398 607673.464089301 463294.52702187625 399110.7589774029 425548.37112493854 595358.4425219682 1.6723151980279638 0.7654414895188556 1.1781591076226257 1.0347504798026332 0.8595550704019066 1.0206850540577972 0.7781774708011823 0.6703705372628121 0.7147767474704723 1.0 19.18339899587854 -2.6224945475208137 1.743633777175862 0.887611596192546 199.99999996746905 0.6638502374326358 0.16295856818745047 242.57388662831633 3.632980128460293 0.04721801973063172 190941.12219020326 0.0023850937396455627 2.6224945475208137 199.1123883712765 PRPAS(ph)LGTGK ddPTM_KYSE-520_SHP099_60min_R1 5 PRPASLGTGK 10 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 PRPAS(0.998)LGT(0.002)GK;PRPAS(0.998)LGT(0.002)GK;PRPAS(1)LGTGK;PRPAS(1)LGTGK;PRPAS(0.998)LGT(0.002)GK 133.48 0.00029233 13759000000.0 27965500.0 8647300.0 10296200.0 12613800.0 8830600.0 14313800.0 9300200.0 10485300.0 8184900.0 16210300.0 True False 26414197.96715788 8231870.728138082 10959909.526502468 13812611.75952275 9525517.980758978 14224462.264765488 10240354.977205165 10448928.94158742 6698728.484538249 16066689.353422554 1.64403489643192 0.5123563757946509 0.682151081994236 0.8597049121747264 0.5928737259571049 0.8853387248528191 0.6373655923722548 0.6503473560569945 0.4169327194411258 1.0 23.93756934708548 -4.254969350152866 24.963632866199188 0.688093522491577 1.6440353340812766 0.7418702289500971 0.16827174528699382 349.3845789466344 1348011.6142612086 0.0398513940814459 0.368820185918009 5.5594349097578797e-05 4.254969350152866 0.9559418115896996 PRPATS(ph)TPDLASHR ddPTM_KYSE-520_SHP099_60min_R1 8 PRPATSTPDLASHR 14 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 PRPAT(0.004)S(0.989)T(0.007)PDLASHR;PRPAT(0.002)S(0.972)T(0.026)PDLASHR;PRPAT(0.04)S(0.844)T(0.116)PDLASHR;PRPAT(0.005)S(0.948)T(0.046)PDLASHR;PRPAT(0.04)S(0.937)T(0.023)PDLASHR;PRPAT(0.024)S(0.961)T(0.015)PDLASHR;PRPAT(0.001)S(0.955)T(0.044)PDLASHR;PRPATS(0.869)T(0.13)PDLASHR 189.41 6.4528e-11 19696840000.0 11064800.0 3708800.0 5090550.0 6800870.0 4374260.0 6203750.0 4810360.0 5322680.0 4152490.0 7662580.0 True False 10451013.48686804 3530623.680977707 5418694.998167981 7447222.640043868 4718489.375865153 6165030.095085777 5296638.133389463 5304216.865402847 3398502.4917543516 7594695.502597024 1.3760938122264799 0.4648802153780098 0.7134841675107377 0.9805821230748847 0.6212874991830357 0.8117547428962268 0.6974128365749839 0.6984107346488161 0.4474837063042522 1.0 22.856560692616434 -4.247573683454947 24.696870961588562 0.7134006345713123 1.3760943398134187 0.5635028751302921 0.1745388443754987 1483.420227141845 2642141.2510183984 0.04181939847484002 0.8258047697282828 5.6549180623861507e-05 4.247573683454947 0.6626937052421064 PRPPGRPVS(ph)GHGMDSR ddPTM_KYSE-520_SHP099_60min_R1 8 PRPPGRPVSGHGMDSR 16 2 P36507;G5E9C7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 PRPPGRPVS(1)GHGMDSR;PRPPGRPVS(1)GHGMDSR;PRPPGRPVS(1)GHGMDSR;PRPPGRPVS(1)GHGMDSR;PRPPGRPVS(0.998)GHGMDS(0.002)R;PRPPGRPVS(1)GHGMDSR;PRPPGRPVS(1)GHGMDSR;PRPPGRPVS(1)GHGMDSR 150.69 4.5253e-06 22790190000.0 10249190.0 3928149.0 5534670.0 10509030.0 4994690.0 8695120.0 6765410.0 7177260.0 5145610.0 9535490.0 True False 9680646.999446265 3739434.8257681425 5891443.683985111 11507805.05154493 5387743.6871013325 8640850.530788993 7449323.666838748 7152363.760245079 4211296.934272241 9451012.977098973 1.0242972920367082 0.395664976318335 0.6233663733465229 1.2176266268419935 0.5700704993376405 0.9142777130585781 0.7882037285198341 0.756782767897598 0.445592122714968 1.0 23.172037537675422 PRPS(ph)ITK ddPTM_KYSE-520_SHP099_60min_R1 1 PRPSITK 7 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 PRPS(1)ITK 55.083999999999996 0.039552 241760000.0 972330.0 714810.0 522980.0 501520.0 733120.0 740870.0 583700.0 697780.0 728060.0 683670.0 True False 918392.916608199 680469.4546483161 556692.1275975859 549184.3100125141 790812.3731177981 736245.9555182279 642706.0923630302 695359.5640430757 595862.6568990347 677613.2156872108 1.3553350131708959 1.004215146480295 0.8215485098427558 0.8104687117938679 1.1670557108538457 1.0865283298401345 0.9484851792791865 1.0261894956370754 0.8793551293044549 1.0 19.37010248668141 -4.269536983331867 4.842957398785526 0.9700316105964809 1.3740194433101358 0.5421028617999611 0.10620953643905152 0.13714573662661997 9.428819898956371 0.02856499667631045 0.18473124900289928 5.3760465022928374e-05 4.269536983331867 0.4039878327136549 PRPS(ph)PSSTR ddPTM_KYSE-520_SHP099_60min_R1 2 PRPSPSSTR 9 1 M0QYC1;M0QZR4;Q92888-2;Q92888;Q92888-3;Q92888-4 M0QYC1 ARHGEF1 Rho guanine nucleotide exchange factor 1 1 PRPS(0.6)PS(0.023)S(0.157)T(0.219)R;PRPS(0.987)PS(0.006)S(0.006)T(0.001)R 87.184 0.007215000000000001 1062090000.0 924180.0 473920.0 524070.0 616230.0 474660.0 569740.0 491840.0 534380.0 579630.0 614560.0 True False 872913.8930928451 451152.17183157697 557852.3907416479 674796.3139236942 512013.04155403434 566184.0413256781 541559.9870958256 532526.3605052301 474383.80328322906 609115.4765204451 1.4330844096744035 0.7406677210186334 0.9158401193947064 1.107829861389254 0.8405845218034753 0.929518397004109 0.8890924758462413 0.8742617467992636 0.7788076671325659 1.0 19.21635623559069 -4.250647645148487 24.72600260155141 0.8995917089735082 1.43308476423371 0.7234988868259014 0.09933977538927082 719.1409918579559 1647658.6411176103 0.02467918422923278 0.34892791042320437 5.615033541250296e-05 4.250647645148487 0.5334930552602017 PS(ph)HPLAK ddPTM_KYSE-520_SHP099_60min_R1 6 PSHPLAK 7 0 F8VWT9;J3KPF0;Q9Y4D8-4;Q9Y4D8;Q9Y4D8-2 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 PS(1)HPLAK;PS(1)HPLAK;PS(1)HPLAK;PS(1)HPLAK;PS(1)HPLAK;PS(1)HPLAK 60.019 0.028049 3123980000.0 5828090.0 5648610.0 4531490.0 5649840.0 6187980.0 5542540.0 5278160.0 6305820.0 7965350.0 5860220.0 True False 5504794.229690621 5377242.29686354 4823597.09604035 6186799.094913671 6674938.821209984 5507946.95195918 5811727.922677496 6283946.582209452 6519043.230133129 5808303.009982174 0.9477457047661009 0.9257854295173975 0.8304658155317476 1.0651646589857677 1.1492063705592503 0.9482885005298791 1.0005896580618188 1.0818902821374565 1.1223662434500188 1.0 22.46968528773974 -5.276672627438957 24.940701926143966 1.0534371722406553 0.9037776282603908 0.5492264779550451 0.06274302045648868 597.1875989581761 977746.6300308051 0.018493688942333535 0.027548774173654433 5.288437456599589e-06 5.276672627438957 -0.1496595439802645 PS(ph)PATVRSTDPVTTK ddPTM_KYSE-520_SHP099_60min_R1 1 PSPATVRSTDPVTTK 15 1 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3;H7C5N8;A0A2R8YET2;A0A2R8Y7F4 E7EPN9 PRRC2C Protein PRRC2C 1 PS(0.473)PAT(0.473)VRS(0.047)T(0.008)DPVTTK 99.48100000000001 0.042445 0.0 590090.0 621850.0 570240.0 468100.0 498820.0 561460.0 460930.0 552840.0 741660.0 625510.0 True False 557356.531384748 591975.3925841198 606998.5828162602 512588.0832606038 538074.2961024381 557955.7198769875 507525.302643296 550922.3270738267 606993.2397271355 619968.4680394159 0.8990078691378105 0.9548475819361891 0.9790797663239686 0.8267970222447101 0.8679059078666382 0.8999743513431625 0.8186308317393796 0.8886295924308211 0.9790711479999731 1.0 19.24183531548472 -7.812808741449026 4.697198844799873 0.996483009282774 0.8915760995778206 0.4121765890539335 0.046859960838877196 0.2177533418083955 9.57354667000288 0.04775523413247096 0.012916296194761324 1.5388321760015795e-08 7.812808741449026 -0.10490690970495342 PS(ph)SPGGLPEEDSVLFNK ddPTM_KYSE-520_SHP099_60min_R1 1 PSSPGGLPEEDSVLFNK 17 0 A0A0U1RQY6;A0A0C4DG54;Q5R372-2;Q5R372-4;Q5R372;Q5R372-3 A0A0U1RQY6 RABGAP1L Rab GTPase-activating protein 1-like 1 PS(0.5)S(0.5)PGGLPEEDSVLFNK 142.54 1.0393e-05 464130000.0 1495300.0 718420.0 736460.0 991070.0 591200.0 1326900.0 928280.0 1198300.0 803410.0 1480300.0 True False 1412352.72819335 683906.0248295957 783933.389977662 1085260.99482394 637724.0765321394 1318618.3249114358 1022119.6015397544 1194143.3769853234 657530.9963179603 1467185.6936559717 0.9626271127780782 0.4661346057194852 0.5343109555711631 0.7396889156679672 0.43465805268523433 0.898739900895345 0.6966531952699253 0.8139006413085488 0.4481579933345093 1.0 20.484620045899625 -6.272403917726026 24.955441773938514 0.7551817977848768 0.6195774043717046 0.11702022588945304 0.19462839754421601 1706.8135247659663 3884720.6801669975 0.06519416249285033 0.05805671094375886 5.340674163045861e-07 6.272403917726026 -0.1356043934131722 PS(ph)SPPRGPGPAR ddPTM_KYSE-520_SHP099_60min_R1 1 PSSPPRGPGPAR 12 1 J3KNZ9;Q9HAH7 J3KNZ9 FBRS Probable fibrosin-1 1 PS(0.717)S(0.283)PPRGPGPAR 51.00899999999999 0.051737 628460000.0 346540.0 232330.0 300520.0 195600.0 238580.0 264920.0 203820.0 295410.0 417850.0 327020.0 True False 327316.7353896369 221168.51806556055 319892.0000490013 214189.76519071535 257354.88866548985 263266.5360129157 224424.11469150757 294385.29165921244 341978.9731413096 324122.85721770994 1.0098539121842358 0.6823601394979805 0.9869467485106526 0.6608289431647405 0.7940041343416495 0.8122430434953322 0.692404468533869 0.9082521800104857 1.055090579161487 1.0 18.306181237862926 -7.540340356268877 4.828562188739863 1.0198937360530131 0.8014471567254343 0.38500120839275986 0.11214856588678764 0.1803764232044826 11.311156675386478 0.07190080202214845 0.02722901985099786 2.881772175172469e-08 7.540340356268877 -0.21844657932757883 PS(ph)VT(ph)T(ph)EKPTVPK ddPTM_KYSE-520_SHP099_60min_R1 1 PSVTTEKPTVPK 12 1 Q9Y493-5;Q9Y493-4;Q9Y493-3;Q9Y493-6;Q9Y493-2;Q9Y493;Q9Y493-7 Q9Y493-5 ZAN Zonadhesin 3 PS(0.75)VT(0.75)T(0.75)EKPT(0.75)VPK 50.123000000000005 0.051879999999999996 391260000.0 44412.0 81763.0 46515.0 41591.0 56163.0 39275.0 51712.0 69129.0 70886.0 37496.0 True False 41948.37782687292 77834.9827512349 49513.43132663144 45543.79613520987 60582.708576242454 39029.870156678466 56939.553620484956 68889.20763382998 58014.88929064228 37163.814611446585 1.1287425218710643 2.094375498452235 1.3323021827630452 1.2254876581259833 1.630153126358099 1.0502116256025325 1.5321234974341782 1.8536635260421266 1.5610585161183503 1.0 15.181610971651288 PSGGFVISGVLS(ph)PDTISSK ddPTM_KYSE-520_SHP099_60min_R1 1 PSGGFVISGVLSPDTISSK 19 0 Q03188;H0Y8J2;H0Y9W1 Q03188 CENPC Centromere protein C 1 PSGGFVISGVLS(1)PDTISSK 145.69 2.1261000000000003e-06 224170000.0 885110.0 452490.0 464710.0 494450.0 359180.0 657660.0 355090.0 580160.0 470230.0 834920.0 True False 836011.18387696 430751.701198663 494665.9501622892 541442.3793381868 387445.4225453553 653555.2999934099 390985.96254443814 578147.5603703626 384848.0855336555 827523.2583579314 1.0102570235136004 0.5205312320204885 0.5977668242749615 0.6542926423754907 0.46819883143123964 0.7897727264974653 0.4724773093632175 0.6986481099245364 0.46506014380467825 1.0 19.65844033529455 -10.57046831290393 5.901059898006027 1.001096296067759 0.6244912413468316 0.3142208062136571 0.16340020760992396 0.002181050021269807 0.00015875613692117006 0.146417031854551 0.035415862506146485 2.6886340046545056e-11 10.57046831290393 -0.3766050547209273 PSLSLGT(ph)ITDEEMK ddPTM_KYSE-520_SHP099_60min_R1 2 PSLSLGTITDEEMK 14 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 PSLSLGT(0.599)IT(0.401)DEEMK;PSLSLGT(0.775)IT(0.225)DEEMK 194.48 3.3678e-10 122633000.0 462650.0 239386.0 220308.0 292480.0 224441.0 363300.0 263390.0 409360.0 259380.0 453730.0 True False 436985.8822300906 227885.53723428852 234509.40618526304 320277.21126268146 242103.2298053955 361032.50994070736 290016.0316386817 407940.0257053419 212283.13043770017 449710.3051965983 0.9717052893396673 0.506738526115528 0.5214677170511879 0.7121856171889746 0.538353751310093 0.8028112893318645 0.644895232080342 0.9071173619804068 0.4720441759610047 1.0 18.77863641845193 -6.277894893125217 24.529267684752234 0.7520385447884826 0.6384302440353136 0.08621221314226879 0.18317726435631923 1710.685237399214 2550009.8322219285 0.06111185331264381 0.05405271080700134 5.273574757297866e-07 6.277894893125217 -0.11360830075316908 PSMS(ph)PTPLDR ddPTM_KYSE-520_SHP099_60min_R1 9 PSMSPTPLDR 10 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 PS(0.449)MS(0.54)PT(0.011)PLDR;PS(0.001)MS(0.968)PT(0.031)PLDR;PSMS(0.5)PT(0.5)PLDR;PSMS(0.984)PT(0.016)PLDR;PSMS(0.811)PT(0.189)PLDR;PSMS(1)PTPLDR;PSMS(0.5)PT(0.5)PLDR;PSMS(0.985)PT(0.015)PLDR;PS(0.06)MS(0.88)PT(0.06)PLDR 261.29 9.9766e-20 8764340000.0 9821440.0 4688860.0 4695140.0 5428980.0 4311530.0 6477140.0 5011340.0 5579050.0 5068790.0 7144350.0 True False 9276625.144644747 4463600.127477657 4997796.2368896175 5944948.626917651 4650822.881750018 6436713.766686914 5517935.153165247 5559697.577710061 4148425.5097976285 7081056.6172202 1.310062275463977 0.6303579209665925 0.7057980901798798 0.8395567142423797 0.6567978669228302 0.9090047029187242 0.7792530764047775 0.7851508437582051 0.5858483746209856 1.0 22.755533220972314 -4.253012525391851 24.995636872149376 0.7609645011594312 1.310062549921937 0.6432519892144708 0.12155979642881187 642.2172022196368 1904896.0219322562 0.028472205697817093 0.31780746362917073 5.584540882527581e-05 4.253012525391851 0.5490980487625058 PSNPLEKER ddPTM_KYSE-520_SHP099_60min_R1 1 PSNPLEKER 9 1 E9PKB5;P35813-2;P35813;P35813-3 E9PKB5 PPM1A Protein phosphatase 1A 0 79.986 0.043035000000000004 0.0 217070.0 228000.0 219410.0 172620.0 236430.0 218430.0 190310.0 177340.0 313830.0 224210.0 False True 205028.6943816828 217046.53776502277 233553.51966841222 189025.75289990444 255035.69589731703 217066.69734750534 209548.39204661353 176724.84893146702 256846.38301049924 222223.67383274055 0.9226230979153024 0.9767030398767756 1.0509839732205994 0.8506103316525001 1.1476531347837984 0.9767937574053579 0.9429616045513349 0.7952566253786318 1.1558011735681137 1.0 17.761652991891914 -4.8185653794007495 0.0028062788185953327 1.8562324140174842 0.09089219345313909 0.007441707770879158 0.10912326714958392 1082248.5008259448 574.5604715635427 177697.02698233793 183768.76105075722 1.5185693169178106e-05 4.8185653794007495 -1.7653402205643451 PSS(ph)MDTKFK ddPTM_KYSE-520_SHP099_60min_R1 1 PSSMDTKFK 9 1 Q9UM82 Q9UM82 SPATA2 Spermatogenesis-associated protein 2 1 PS(0.058)S(0.871)MDT(0.072)KFK 58.676 0.03688 326060000.0 151170.0 1646400.0 671850.0 619780.0 1978600.0 428250.0 641800.0 798250.0 1453700.0 256180.0 True False 142784.2987500763 1567304.4727032187 715158.525998007 678683.7048563483 2134304.563305971 425577.132898728 706679.4073643878 795481.0570629515 1189744.7247948365 253910.44450502424 0.5623411791051823 6.172666412988796 2.8165778189713495 2.672925511903938 8.40573757202705 1.6760914807122356 2.7831836880203813 3.1329197923057905 4.685686432136093 1.0 17.95396021532883 -10.217706269290433 4.465085134128427 0.9995460297454426 3.7171909375536867 0.12033589124501298 2.1490535969685944 705254730.8256061 9955.620937033342 6330468.060352566 0.49890543986607827 6.057504294563085e-11 10.217706269290433 2.717644907808244 PSS(ph)PGGLPEEDSVLFNK ddPTM_KYSE-520_SHP099_60min_R1 3 PSSPGGLPEEDSVLFNK 17 0 A0A0U1RQY6;A0A0C4DG54;Q5R372-2;Q5R372-4;Q5R372;Q5R372-3 A0A0U1RQY6 RABGAP1L Rab GTPase-activating protein 1-like 1 PS(0.055)S(0.945)PGGLPEEDSVLFNK;PS(0.017)S(0.983)PGGLPEEDSVLFNK;PSS(1)PGGLPEEDSVLFNK 320.78 1.0656999999999999e-43 106352000.0 1221170.0 781910.0 691590.0 752850.0 653950.0 1060730.0 801370.0 972330.0 802710.0 1216600.0 True False 1153429.2657579575 744345.8699291623 736170.9979831239 824400.6376473935 705412.1445334787 1054109.5906121847 882380.3002175121 968957.2141735273 656958.0986723953 1205821.8705004777 0.9565502948451461 0.6172933897941498 0.6105138876586931 0.6836836002196784 0.5850052663588665 0.8741835062045071 0.7317667076740606 0.8035657984635496 0.5448218470276411 1.0 20.201585370818993 -6.26047333799536 24.998251898458157 0.7748966265652242 0.6817016814824853 0.10036667907961438 0.145002742852667 230.0702158061259 5953573.9297767235 0.047782395273820936 0.04515808903425344 5.489422549799548e-07 6.26047333799536 -0.09319494508273884 PSS(ph)PPRGPGPAR ddPTM_KYSE-520_SHP099_60min_R1 3 PSSPPRGPGPAR 12 1 J3KNZ9;Q9HAH7 J3KNZ9 FBRS Probable fibrosin-1 1 PS(0.152)S(0.848)PPRGPGPAR;PS(0.012)S(0.988)PPRGPGPAR;PS(0.161)S(0.839)PPRGPGPAR 101.38 0.0019835 942440000.0 1805270.0 807660.0 856450.0 890229.0 685530.0 1155010.0 817620.0 998690.0 1022330.0 1325770.0 True False 1705128.0743834737 768858.8012776249 911658.1373684504 974836.0965028912 739477.3108678572 1147801.1541607946 900273.0088022304 995225.7774859982 836700.6428420608 1314024.709233451 1.2976377555169238 0.5851174607866744 0.6937907110592122 0.741870445550123 0.562757538478282 0.8735004342729411 0.6851263925831451 0.7573874147820042 0.6367465063348453 1.0 20.325560974020487 -4.2534559453848715 24.99422331567524 0.7163538627461616 1.2976380397655187 0.6523444042751118 0.12494857285722785 564.4107467906673 1766995.238694607 0.02849405962149748 0.30734045133290633 5.578841907644009e-05 4.2534559453848715 0.5812841770193571 PSS(ph)SPVIFAGGQDR ddPTM_KYSE-520_SHP099_60min_R1 2 PSSSPVIFAGGQDR 14 0 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 PS(0.006)S(0.497)S(0.497)PVIFAGGQDR;PS(0.003)S(0.57)S(0.427)PVIFAGGQDR 109.83 0.0011304 1015170000.0 2536400.0 1654110.0 1616800.0 1633410.0 1401760.0 1882040.0 1632770.0 1799720.0 1826680.0 2067320.0 True False 2395700.835811957 1574644.0727302728 1721021.514971464 1788648.7952973777 1512070.537076609 1870293.4902527076 1797826.3258995838 1793477.1913778055 1495000.9588554918 2049005.1531506204 1.1692019574124766 0.768492002232911 0.8399303009683321 0.8729352352028448 0.737953506242577 0.9127812525883013 0.8774142530267357 0.8752916939325865 0.7296228399214747 1.0 20.966492181987388 -4.2533274401046395 24.678381149782872 0.8424865459228001 1.1692021510289032 0.6017666397207744 0.07881763084011832 550.2593839539959 1673970.0993950013 0.01838271683847115 0.19787931049523694 5.5804928996504774e-05 4.2533274401046395 0.3267156051061031 PSSIPAPAEAEAWS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 PSSIPAPAEAEAWSPR 16 0 H7C1F0;F8WAB6;D3YTB5;P51617-4;P51617-2;P51617-3;P51617 H7C1F0 IRAK1 Interleukin-1 receptor-associated kinase 1 1 PSSIPAPAEAEAWS(1)PR;PSSIPAPAEAEAWS(1)PR 188.58 2.4134e-09 0.0 497130.0 229710.0 287270.0 326790.0 250630.0 386030.0 330620.0 317030.0 301970.0 402710.0 True False 469553.20789591386 218674.38679826068 305787.8838482514 357848.0233470041 270353.1551103686 383620.6435794426 364042.29614025203 315930.2969253584 247139.86004422943 399142.3027036387 1.1764055193231546 0.5478607136278045 0.7661124410441094 0.8965424634850208 0.6773352593275601 0.9611124678615665 0.912061421889806 0.7915229600705471 0.6191773168872297 1.0 18.606543664001467 -4.232550697904862 23.77474478208538 0.7974957030529805 1.1764066458681732 0.392946429406435 0.141523218658062 5981.170176188552 4922220.018406337 0.034678418122417336 3.325336287262694 5.8539539547435846e-05 4.232550697904862 0.3789109428151928 PSSS(ph)PVIFAGGQDR ddPTM_KYSE-520_SHP099_60min_R1 1 PSSSPVIFAGGQDR 14 0 Q15366;Q15366-2;Q15366-6;Q15366-3;H3BSS4 Q15366 PCBP2 Poly(rC)-binding protein 2 1 PSS(0.083)S(0.916)PVIFAGGQDR 162.41 3.88e-08 2159100000.0 3492600.0 1426700.0 1371500.0 2077000.0 1511800.0 2300700.0 1960200.0 1985700.0 1666600.0 2718500.0 True False 3298858.515674513 1358159.1904796422 1459909.084477589 2274397.4555271813 1630770.0590346565 2286340.4778986666 2158356.1457084347 1978812.0701658642 1363987.4515670869 2694416.204960996 1.2243314561427479 0.5040643639163768 0.5418276069560392 0.8441151190152174 0.6052405920184344 0.8485476273817777 0.8010477897714688 0.7344121767537058 0.506227452557513 1.0 21.361541289632452 PSSS(ph)VT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 PSSSVTPR 8 0 I3L2K5;Q8IWR0;I3L323 I3L2K5 ZC3H7A Zinc finger CCCH domain-containing protein 7A 2 PS(0.001)S(0.001)S(0.998)VT(0.999)PR 94.85 0.015456000000000001 1746900000.0 1043300.0 862190.0 983390.0 911100.0 1077200.0 1067200.0 1197900.0 1295400.0 1261300.0 1131600.0 True False 985426.0692330129 820769.0982264255 1046780.8928796315 997690.6700677965 1161969.5115703994 1060539.2089422592 1318995.4223773761 1290906.5597486342 1032279.7147855303 1121574.9043714793 0.878609235452925 0.7318005199896812 0.9333134049270104 0.889544395277722 1.03601596918893 0.9455803663301258 1.1760208054196162 1.15097667994992 0.920384105209639 1.0 20.097094543343243 -5.573526751964135 1.0740677945461878 1.0623093381860464 0.8117009827304806 0.5053130814553108 0.08792620804821337 0.40569719071432286 0.9678891167278668 0.03604436316442093 0.06825669337597476 2.6697663080004134e-06 5.573526751964135 -0.2506083554555658 PSSTTPTPLVSETGGNS(ph)PSDKVDNELK ddPTM_KYSE-520_SHP099_60min_R1 1 PSSTTPTPLVSETGGNSPSDKVDNELK 27 1 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 PSSTTPTPLVSETGGNS(0.993)PS(0.006)DKVDNELK 150.48 6.2669e-07 1004400000.0 640170.0 254160.0 225860.0 338700.0 272320.0 477760.0 338080.0 398640.0 248230.0 529960.0 True False 604658.4939527443 241949.77209806224 240419.29698877726 370889.9461661315 293750.0347111508 474778.12262392615 372256.4257428365 397257.2108832759 203157.6893690732 525264.9667026411 1.1511494812770349 0.46062423240770395 0.4577105122734781 0.7061006723795018 0.5592416272403834 0.9038830927643111 0.7087021776450882 0.7562986988777571 0.3867718242174016 1.0 19.00268583953133 -6.193940516268494 24.999024363308642 0.7332554497248824 0.6460509725233938 0.024365383391215967 0.23612982808758298 831.3588017329874 307902.299657372 0.07640518107867157 0.07640516912812927 6.398224636311504e-07 6.193940516268494 -0.0872044772014886 PSTQPRPDS(ph)WGEDNWEGLETDSR ddPTM_KYSE-520_SHP099_60min_R1 10 PSTQPRPDSWGEDNWEGLETDSR 23 1 H0YDH0;E9PPN3;E9PS17;Q96KG9-3;Q96KG9-2;Q96KG9 H0YDH0 SCYL1 N-terminal kinase-like protein 1 PST(0.002)QPRPDS(0.997)WGEDNWEGLETDSR;PSTQPRPDS(1)WGEDNWEGLETDSR;PS(0.01)T(0.01)QPRPDS(0.979)WGEDNWEGLETDSR;PSTQPRPDS(1)WGEDNWEGLETDSR;PS(0.042)T(0.042)QPRPDS(0.916)WGEDNWEGLETDSR;PSTQPRPDS(1)WGEDNWEGLETDSR;PSTQPRPDS(1)WGEDNWEGLETDSR;PSTQPRPDS(1)WGEDNWEGLETDSR;PSTQPRPDS(1)WGEDNWEGLETDSR;PSTQPRPDS(1)WGEDNWEGLETDSR 252.67 4.4333999999999993e-29 15340340000.0 9661330.0 7131500.0 6892850.0 9759150.0 7446340.0 7213480.0 7169460.0 8039670.0 8837260.0 8506260.0 True False 9125396.765516121 6788892.035400257 7337174.139949944 10686656.681804549 8032324.594120988 7168457.995615452 7894218.983986733 8011782.261243087 7232636.353195575 8430901.154170137 1.0823750152737195 0.8052391922590979 0.8702716359473378 1.2675580565333349 0.952724322968488 0.8502599976598885 0.9363434394058875 0.9502877705167089 0.8578722749724246 1.0 23.007255414153267 -5.996631916907667 24.999868372283164 0.915216977646148 0.9982577680075052 0.10024886526738885 0.12231404262144523 278.68223181395706 2068505.037737842 0.03968072016295657 0.044773458706834496 1.0077854481341874e-06 5.996631916907667 0.08304079036135725 PTEATVSLS(ph)SLVDYPHQAR ddPTM_KYSE-520_SHP099_60min_R1 1 PTEATVSLSSLVDYPHQAR 19 0 F5H1R4;K7ES92;K7ES98;K7EM85;Q92619;Q92619-2 F5H1R4;K7ES98 HMHA1 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 1 PTEATVSLS(0.995)S(0.005)LVDYPHQAR 260.15 3.0810999999999997e-35 188130000.0 155840.0 80837.0 85571.0 86150.0 58354.0 115190.0 65063.0 82597.0 74667.0 123900.0 True False 147195.24454066184 76953.46918118917 91087.0435784409 94337.67009805793 62946.12781115771 114471.05648243912 71640.20299368832 82310.49028528464 61109.35500189577 122802.34239274132 1.1986354793616896 0.6266449619916842 0.7417370206761214 0.7682074157539368 0.5125808399472221 0.9321569462929508 0.5833781473367309 0.670268080245918 0.4976236919525393 1.0 16.90597855408759 -4.256734839584028 24.765845622208367 0.6939412382467448 1.1986357142424582 0.47077817434139924 0.15715094205501565 353.89519893301957 1862917.9645174127 0.036196361057607505 0.2846151442132595 5.536880627303255e-05 4.256734839584028 0.5046944759957134 PTLLANGGHGVEGSDTTGS(ph)PTEFLEEK ddPTM_KYSE-520_SHP099_60min_R1 2 PTLLANGGHGVEGSDTTGSPTEFLEEK 27 0 E7EVA0;A0A0J9YW37;P27816-6;P27816;P27816-2;P27816-5;H7C456 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 PTLLANGGHGVEGSDTT(0.008)GS(0.986)PT(0.006)EFLEEK;PTLLANGGHGVEGS(0.001)DT(0.026)T(0.144)GS(0.811)PT(0.017)EFLEEK 166.27 2.7516e-10 808740000.0 255253.0 208653.0 184694.0 238922.0 167938.0 225758.0 196850.0 240435.0 197585.0 269180.0 True False 241093.60725575968 198628.99668546172 196599.67076084853 261629.0750454815 181153.76516348863 224348.96058132176 216749.51907086305 239600.98710295057 161708.54471251805 266795.2746188712 0.9036652077146887 0.7444996803980579 0.7368933765476161 0.9806360904226289 0.6789991517738638 0.8409030516069451 0.8124188832823193 0.8980705803175529 0.6061147257706337 1.0 18.025373588694343 -10.248539384266868 4.370180596898381 1.0000998605822111 0.8029124428766136 0.23894194866599405 0.10685502212317613 9.945017416714723e-05 1.710066712600147e-05 0.09643958989556785 0.023377905807285722 5.6423577095094784e-11 10.248539384266868 -0.19718741770559756 PTS(ph)SPAKGPPQK ddPTM_KYSE-520_SHP099_60min_R1 3 PTSSPAKGPPQK 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 PT(0.06)S(0.47)S(0.47)PAKGPPQK;PT(0.021)S(0.805)S(0.174)PAKGPPQK;PT(0.006)S(0.789)S(0.205)PAKGPPQK 196.11 8.734e-08 10563600000.0 18963200.0 7648000.0 8569900.0 9865500.0 7008000.0 12442800.0 8966000.0 10738600.0 8448600.0 15034100.0 True False 17911273.493797984 7280578.600117965 9122329.466324825 10803114.15382927 7559489.729934416 12365139.86977768 9872370.779727481 10701350.303008068 6914547.211874287 14900909.570352826 1.2020255145655432 0.4885996096911803 0.6121995052218027 0.7249969609454835 0.5073173348407497 0.8298245024169283 0.6625347756871006 0.7181675891986962 0.4640352442398295 1.0 23.82889706151551 -8.999978391605483 11.104127306953135 0.9999817176323782 0.6815512890127831 0.17104098539890356 0.2040046553952718 0.0 0.0 0.18463199537171257 0.044779836399183655 1.0000497564049079e-09 8.999978391605483 -0.31843042861959514 PTSS(ph)PAKGPPQK ddPTM_KYSE-520_SHP099_60min_R1 6 PTSSPAKGPPQK 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 PTS(0.225)S(0.775)PAKGPPQK;PT(0.06)S(0.139)S(0.801)PAKGPPQK;PT(0.011)S(0.087)S(0.903)PAKGPPQK;PTS(0.026)S(0.974)PAKGPPQK;PTS(0.011)S(0.989)PAKGPPQK;PTS(0.026)S(0.973)PAKGPPQK 223.46 8.262399999999999e-11 8572440000.0 20826600.0 8771020.0 9212740.0 10708050.0 7919690.0 14328150.0 9501260.0 12238190.0 9151600.0 17227090.0 True False 19671306.981202208 8349647.033630576 9806607.961305182 11725739.852507364 8542924.546127895 14238722.70109261 10461740.08416167 12195738.575305006 7489900.133062121 17074471.385073192 1.1520887843356142 0.4890135012279201 0.5743432836156962 0.6867410175144991 0.5003331788998324 0.8339188007624269 0.6127123849531009 0.7142674171433933 0.4386607329823356 1.0 24.025337578484525 -7.630683591405631 19.291834532695976 0.6718916248711829 0.6795432593248213 0.0 0.22235018397317877 116.24167762987453 20347.02395051796 0.14109315684551937 0.05332713067524294 2.3405418374422028e-08 7.630683591405631 0.007651634453638367 PTTQQS(ph)PQDEQEKLLDEAIQAVK ddPTM_KYSE-520_SHP099_60min_R1 6 PTTQQSPQDEQEKLLDEAIQAVK 23 1 Q96QK1;I3L4S0;A0A1W2PP10;A0A3B3ITD4 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 1 PT(0.144)T(0.144)QQS(0.712)PQDEQEKLLDEAIQAVK;PT(0.019)T(0.019)QQS(0.961)PQDEQEKLLDEAIQAVK;PTT(0.001)QQS(0.999)PQDEQEKLLDEAIQAVK;PT(0.028)T(0.028)QQS(0.944)PQDEQEKLLDEAIQAVK;PTTQQS(1)PQDEQEKLLDEAIQAVK;PTTQQS(1)PQDEQEKLLDEAIQAVK 286.34 2.3452e-48 1154006000.0 1773650.0 916871.0 1123297.0 927038.0 737814.0 1211480.0 761879.0 889920.0 1117304.0 1323688.0 True False 1675262.098816381 872823.1409085717 1195706.5219587472 1015143.4127958618 795875.7642125912 1203918.7039443117 838897.1645424935 886833.075228889 914429.7585417673 1311961.154133682 1.2769144067551261 0.6652812380599156 0.9113886628360576 0.7737602669083479 0.6066305863591871 0.9176481332172421 0.6394222587302416 0.6759598578316789 0.6969945380323294 1.0 20.32329357314574 -4.255238287507583 24.58436452876538 0.7558145715999597 1.2769147011172581 0.5885440983165493 0.1281319179098915 369.43271380007377 1464572.6695234566 0.030241939978436664 0.27037983652157055 5.555993289054212e-05 4.255238287507583 0.5211001295172984 PVANDS(ph)QPLT(ph)VYFS(ph)LSLLQIMDVDQK ddPTM_KYSE-520_SHP099_60min_R1 1 PVANDSQPLTVYFSLSLLQIMDVDQK 26 0 A0A1W2PN81 A0A1W2PN81 3 PVANDS(0.604)QPLT(0.604)VY(0.585)FS(0.604)LS(0.604)LLQIMDVDQK 41.482 0.060329999999999995 903890000.0 202150.0 202260.0 188040.0 195470.0 153020.0 150660.0 176170.0 168470.0 226300.0 184930.0 True False 190936.3365239657 192543.1260015504 200161.35927463762 214047.41002980157 165061.80343529777 149719.67505551045 193978.98285351213 167885.61689119344 185209.62455876108 183291.66407336277 1.041707692978024 1.050473991684012 1.0920374381811642 1.1677967523069066 0.9005417909743649 0.8168384296821317 1.0583077186525611 0.9159479114336425 1.010463980973137 1.0 17.48378164943907 -5.77102055169591 24.999951326208112 0.9448696698211474 1.0856113669233625 0.47840141978292683 0.07025775614384294 176.46889314077808 460455.2828102299 0.02219872172784338 0.02549533663626979 1.69425762284251e-06 5.77102055169591 0.14074169710221507 PVKQCIHQLCFTSLRRMYIVNK ddPTM_KYSE-520_SHP099_60min_R1 1 PVKQCIHQLCFTSLRRMYIVNK 22 3 H0YGS3;F5H7Z2;F5H2W4;B3KW70;F5GYX4;H0YG03;Q13361-2;Q13361 H0YGS3 MFAP5 Microfibrillar-associated protein 5 0 43.12 0.058816999999999994 1972000000.0 1533500.0 1511500.0 1588200.0 1246600.0 2543900.0 2239700.0 1510300.0 2215000.0 3682100.0 1792400.0 False True 1448433.6980435387 1438885.2711922461 1690577.9132098486 1365076.4891960425 2744090.4571889555 2225721.2015254702 1662975.8631075658 2207316.6819848875 3013523.458187429 1776520.7304660983 0.81532045936977 0.8099456688100295 0.9516229584139436 0.7683988516350683 1.5446430824755983 1.2528540553205463 0.9360858190893487 1.2424941877293845 1.696306385007274 1.0 20.760623093099493 -5.744135216297505 24.999833036176167 1.2724292576771667 0.8426736336809402 0.5041563271044099 0.21484933970000059 217.83157124786368 314706.27065095847 0.0646672213088221 0.08328314777939189 1.8024564640196473e-06 5.744135216297505 -0.4297556239962266 PVS(ph)PSAYMLR ddPTM_KYSE-520_SHP099_60min_R1 1 PVSPSAYMLR 10 0 Q9BT49 Q9BT49 THAP7 THAP domain-containing protein 7 1 PVS(0.775)PS(0.225)AYMLR 133.89 0.00030046 297130000.0 212100.0 109250.0 111470.0 108740.0 85648.0 148530.0 138020.0 136820.0 93618.0 158620.0 True False 200334.3901891323 104001.46601240683 118655.53455830601 119074.61690612696 92388.01032954095 147602.96917559407 151972.40854539227 136345.40335402818 76619.33111772918 157214.75020449245 1.2742722290914386 0.6615248625025959 0.754735382042514 0.7574010501638311 0.5876548492388276 0.9388620913979373 0.9666548994144547 0.8672557961430523 0.4873545962962689 1.0 17.262377054937744 -4.252880223328326 24.612522029246534 0.7792779571032422 1.2742725415199434 0.4639011544740196 0.1593489735073465 815.0552056818856 2343691.2005694453 0.03967864082778758 0.44406833476631563 5.586242398122846e-05 4.252880223328326 0.4949945844167012 PVS(ph)WVPQLKARMVSK ddPTM_KYSE-520_SHP099_60min_R1 1 PVSWVPQLKARMVSK 15 2 A0A0G2JQJ7;A0A0G2JS76 A0A0G2JQJ7 1 PVS(1)WVPQLKARMVSK 46.3 0.058391 476130000.0 1288900.0 887820.0 694390.0 378640.0 1089500.0 993200.0 752750.0 965400.0 820190.0 821740.0 True False 1217402.1476415517 845167.7945550118 739151.4904632833 414625.8317577332 1175237.451592972 987001.0703911652 828845.3161320391 962051.2527260528 671264.1713073377 814460.0229040463 1.4947353011885975 1.0377032276445852 0.907535630573687 0.5090806425088115 1.4429651775940264 1.2118471657723664 1.0176623687147963 1.1812135963355865 0.8241830813424972 1.0 19.635484361433747 -7.343353080845857 0.015036957631233463 8.562729024288949e-06 2.0835616022285133 0.030182245953528697 0.27177290531523546 2913.3045191669867 44.016455067038095 3035.069129134164 3052.9151397685573 4.535727126890284e-08 7.343353080845857 2.083553039499489 PVSIPADLQGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 PVSIPADLQGSR 12 0 Q92870;Q92870-4;H0YAJ5;G5E9Y1;Q92870-2 Q92870 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 1 PVSIPADLQGS(1)R 113.25 0.00016691 85055000.0 229820.0 90835.0 116950.0 144230.0 94234.0 134470.0 127240.0 143890.0 124820.0 176950.0 True False 217071.42646518844 86471.15025388531 124488.78412661601 157937.57583566938 101649.67968188367 133630.72285088623 140102.66094273108 143390.87917417864 102155.83445614052 175382.36066501678 1.237703869659951 0.4930435987176991 0.7098135961597167 0.90053284285147 0.5795889580710814 0.7619393554983738 0.7988412313044952 0.8175900850602508 0.5824749653772757 1.0 17.42014412837222 -9.530079915499073 24.246561372166543 0.9999999999999984 0.7560569169297308 0.11175695941103314 0.19776111760068027 0.0 0.0 0.17795448830125687 0.04316030304816615 2.9506662180167835e-10 9.530079915499073 -0.24394308307026769 PVSPS(ph)AYMLR ddPTM_KYSE-520_SHP099_60min_R1 1 PVSPSAYMLR 10 0 Q9BT49 Q9BT49 THAP7 THAP domain-containing protein 7 1 PVS(0.473)PS(0.527)AYMLR 138.25 0.00026103 266600000.0 251930.0 120170.0 125030.0 141600.0 89755.0 162900.0 125450.0 139000.0 108260.0 240180.0 True False 237954.94068999603 114396.85282115254 133089.63385507325 155057.6214264078 96818.2078639075 161883.2806753132 138131.71027401445 138517.8414428438 88602.71301251216 238052.19205721273 0.9995914703982506 0.48055366276005035 0.5590775396980461 0.6513597715123822 0.4067100034963699 0.6800327242372407 0.5802580899604415 0.5818801341243388 0.37219868570341774 1.0 17.860918388168322 -12.402913870501191 8.55757074941235 0.8288983748096439 0.6076349434289308 0.0 0.20747406934577844 0.0 0.0 0.0 0.04383809172259271 3.9544503714951327e-13 12.402913870501191 -0.22126343138071314 PVSSAASVYAGAGGS(ph)GSR ddPTM_KYSE-520_SHP099_60min_R1 8 PVSSAASVYAGAGGSGSR 18 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 PVSSAASVYAGAGGS(0.998)GS(0.002)R;PVSSAAS(0.002)VYAGAGGS(0.926)GS(0.072)R;PVSSAASVYAGAGGS(0.977)GS(0.023)R;PVSS(0.021)AAS(0.002)VYAGAGGS(0.933)GS(0.044)R;PVSSAASVYAGAGGS(0.839)GS(0.161)R;PVSSAASVYAGAGGS(0.992)GS(0.008)R;PVSSAASVYAGAGGS(0.94)GS(0.06)R;PVSSAASVYAGAGGS(0.938)GS(0.062)R 305.63 1.3380999999999998e-39 12347710000.0 4315210.0 2269930.0 2455590.0 2548880.0 2029535.0 2670480.0 1969770.0 2355590.0 2365820.0 3211940.0 True False 4075836.6991421273 2160879.155565607 2613881.2604829157 2791124.7888512868 2189247.858025467 2653812.543755741 2168893.5747026335 2347419.0080888364 1936246.7254688824 3183484.7104515107 1.280306667018374 0.6787779279954925 0.8210754874686335 0.876751435208063 0.6876891385210919 0.8336187496183555 0.6812954268578917 0.737374048124737 0.6082161221356286 1.0 21.602175404628458 -4.255690149820881 24.776288293480526 0.762881224690646 1.280306921517485 0.6586554954212038 0.11024404552257026 321.24115239185727 1384341.90237549 0.02586576901586286 0.22297935372668637 5.550215554157446e-05 4.255690149820881 0.5174256968268389 PVSSIIDVDLVPET(ph)HRRVR ddPTM_KYSE-520_SHP099_60min_R1 1 PVSSIIDVDLVPETHRRVR 19 2 Q9BYG4 Q9BYG4 PARD6G Partitioning defective 6 homolog gamma 1 PVSSIIDVDLVPET(1)HRRVR 52.343999999999994 0.057236 0.0 37159.0 56294.0 74488.0 102170.0 75789.0 54699.0 53949.0 56609.0 83044.0 48390.0 True False 35097.71619536996 53589.551740983305 79289.61566501383 111880.20608146951 81753.16311957766 54357.60325143614 59402.691411501015 56412.636591639915 67965.30296888102 47961.3022468503 0.7317923940998681 1.1173498055821165 1.6531998079810462 2.332718271610669 1.704565124166255 1.1333637892412711 1.2385545977413925 1.1762115278123966 1.4170862713250123 1.0 15.549583210936424 -6.271393292707969 24.418592088215153 1.206900906676295 1.5401191173982849 0.1316461123526469 0.399312730746079 1195.1485982376437 2931886.884611726 0.15682974306020095 0.1399966873588096 5.353116650928874e-07 6.271393292707969 0.33321821072198987 PVSVAGS(ph)PLS(ph)PGPVR ddPTM_KYSE-520_SHP099_60min_R1 3 PVSVAGSPLSPGPVR 15 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 2 PVS(0.003)VAGS(0.999)PLS(0.998)PGPVR;PVSVAGS(1)PLS(1)PGPVR;PVSVAGS(1)PLS(1)PGPVR 247.38 5.6987e-19 2429120000.0 5876300.0 3050540.0 3362940.0 4179510.0 3227130.0 4352790.0 3204880.0 3645360.0 3358100.0 4703800.0 True False 5550329.924886366 2903987.479446108 3579720.49329425 4576729.373784496 3481086.771142022 4325622.623024526 3528860.5470146174 3632715.0969934207 2748353.6908120927 4662127.991501022 1.1905142748128152 0.6228888363296817 0.7678297335079642 0.9816824810746926 0.7466733597807659 0.9278215078843954 0.7569205636240937 0.7791967752957012 0.5895062717759558 1.0 22.152557181291833 -6.793226104478031 24.09957360176843 0.7630055014504374 0.8559684322174894 0.05480244743033047 0.17131705202542571 416.78744868892693 315988.37226268975 0.068535301097089 0.04621226142715046 1.609807311360681e-07 6.793226104478031 0.09296293076705198 PVSVAGS(ph)PLSPGPVR ddPTM_KYSE-520_SHP099_60min_R1 4 PVSVAGSPLSPGPVR 15 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 PVSVAGS(0.977)PLS(0.023)PGPVR;PVS(0.001)VAGS(0.995)PLS(0.004)PGPVR;PVSVAGS(0.998)PLS(0.002)PGPVR;PVSVAGS(0.988)PLS(0.012)PGPVR 149.09 6.5444e-06 2190880000.0 2879110.0 1817420.0 1559520.0 1642740.0 1355040.0 2333470.0 1304640.0 1600830.0 1561160.0 2389230.0 True False 2719400.0289365095 1730108.415196966 1660049.154520225 1798865.5156922091 1461673.9388770452 2318905.948173255 1436525.7432593864 1595277.094366529 1277692.6976409876 2368063.280992813 1.1483645942925977 0.730600583643025 0.7010155378213743 0.7596357454341477 0.6172444590518869 0.9792415459442669 0.6066247278058894 0.6736632028252671 0.5395517543371195 1.0 21.175276203481356 -4.261570071343796 6.848848831592877 0.7233127910421338 1.155231947754172 0.42802827105663166 0.14316842509594097 0.0995616512755171 33.48324134788866 0.0337203534491041 0.1998337817368075 5.475577480027173e-05 4.261570071343796 0.4319191567120382 PVSVAGSPLS(ph)PGPVR ddPTM_KYSE-520_SHP099_60min_R1 4 PVSVAGSPLSPGPVR 15 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 PVSVAGS(0.061)PLS(0.939)PGPVR;PVSVAGS(0.002)PLS(0.998)PGPVR;PVSVAGS(0.031)PLS(0.969)PGPVR;PVSVAGS(0.001)PLS(0.999)PGPVR 208.39 5.3445000000000006e-14 6353500000.0 9270900.0 5433660.0 4926830.0 5253510.0 3697910.0 7918800.0 4983800.0 6333700.0 5452650.0 9370500.0 True False 8756624.695919033 5172618.817510057 5244421.34500672 5752802.010874629 3988914.478770235 7869375.831870285 5487611.141200744 6311729.872996692 4462586.210120765 9287484.660138687 0.9428413630120895 0.5569450725136181 0.5646761784184101 0.6194144293519322 0.4294935200152104 0.8473096990022672 0.5908608565194442 0.6795951868525014 0.48049459820632706 1.0 23.14685649212102 -10.274215170600726 5.41227218472214 1.000043646217729 0.6300937547554005 0.35147843470708495 0.14877770122086523 7.464911781730555e-05 1.0010127028694293e-05 0.13724050185572484 0.033281793785133726 5.318446922626282e-11 10.274215170600726 -0.3699498914623284 PVVDPSRITR ddPTM_KYSE-520_SHP099_60min_R1 4 PVVDPSRITR 10 1 H0YL47;H0YK38;H0YM99;H0YK74;H0YK91;H0YLZ9;H0YMS4;H0YL16;Q9NQU5-2;Q9NQU5 H0YL47 PAK6 Serine/threonine-protein kinase PAK 6 0 ;;; 74.533 0.019736 3753220000.0 440458.0 367180.0 352845.0 370244.0 339319.0 349590.0 313710.0 328472.0 445361.0 357173.0 False True 416024.91670874495 349540.1216515838 375589.9532719609 405431.878442082 366021.4748389868 347408.0791361739 345422.8683145564 327332.6072979409 364494.66903718235 354008.7250963891 1.175182664199788 0.9873771375448765 1.0609624188491278 1.145259564807877 1.0339334849425728 0.9813545670140813 0.9757467650564405 0.9246455923051475 1.0296205805038792 1.0 18.433425392649518 -6.078299739691274 3.699797780403906 0.9776201782719851 1.0832967439115933 0.4802620765268666 0.05319420749037942 0.2168141390010377 5.647712408479145 0.017830152365794966 0.018327836937088553 8.350265039325464e-07 6.078299739691274 0.10567656563960814 PY(ph)LLIST(ph)QIR ddPTM_KYSE-520_SHP099_60min_R1 1 PYLLISTQIR 10 0 A0A087WTI4;H0YNM1;P30047-2;P30047 A0A087WTI4 GCHFR GTP cyclohydrolase 1 feedback regulatory protein 2 PY(1)LLIS(0.111)T(0.889)QIR 87.363 0.02405 1762900000.0 791360.0 709710.0 713470.0 527440.0 708790.0 698430.0 653450.0 631090.0 787360.0 720650.0 True False 747461.6832629511 675614.4663035722 759461.4177923617 577567.7390193818 764567.7405365618 694070.8393005456 719507.1030574312 628900.8960875131 644395.2717303855 714265.6016572161 1.0464758228993731 0.945886886805179 1.0632759242924252 0.8086176034227712 1.0704249774350554 0.971726536585529 1.0073383085900454 0.880486046966783 0.902178783683941 1.0 19.446101118636847 -7.253211175127282 24.920937424751845 0.918499310469552 0.9846603893580297 0.1100421542887573 0.07673777876010773 1144.6568721533445 3466859.575038634 0.034924132218026455 0.019724859560617355 5.5819870534163274e-08 7.253211175127282 0.06616107888847766 PY(ph)QYPALTPEQK ddPTM_KYSE-520_SHP099_60min_R1 2 PYQYPALTPEQK 12 0 P04075;H3BQN4;J3KPS3;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 PY(1)QYPALTPEQK;PY(0.999)QY(0.001)PALTPEQK 181.62 1.717e-07 404420000.0 1669000.0 1037460.0 1025830.0 1070380.0 870800.0 1195690.0 968430.0 1164010.0 1153510.0 1380660.0 True False 1576417.2429309855 987618.864340791 1091956.6431860342 1172108.5933785175 939327.0058257552 1188227.2551913147 1066328.3553659928 1159972.3209919771 944061.6616207552 1368428.4265372262 1.1519910083423726 0.721717588723245 0.7979640162468731 0.8565362796098214 0.6864275745883901 0.8683152382314171 0.7792357529902458 0.8476675129639465 0.6898874967174422 1.0 20.38408854814093 -4.253653095770464 24.969282725015823 0.7993562727952969 1.1519911817547581 0.568723183151721 0.0904365116742016 626.1235945112968 2007824.7654920083 0.020367752297295285 0.21276945695304011 5.5763099362038516e-05 4.253653095770464 0.35263490895946126 PYHPPPLFPPS(ph)PQPPDSTPR ddPTM_KYSE-520_SHP099_60min_R1 2 PYHPPPLFPPSPQPPDSTPR 20 0 P54259 P54259 ATN1 Atrophin-1 1 PYHPPPLFPPS(1)PQPPDSTPR;PYHPPPLFPPS(1)PQPPDSTPR 129.93 1.3554000000000001e-05 951480000.0 899730.0 361730.0 367920.0 506990.0 343890.0 655280.0 440300.0 538330.0 367340.0 704710.0 True False 849820.1833327116 344351.94783220085 391636.7118928136 555174.1771678982 370952.186533554 651190.1544562252 484809.8209138981 536462.6588771668 300640.31588782754 698466.8176560836 1.216693709494375 0.49301117694864566 0.5607091160136554 0.7948468891205924 0.53109493129308 0.9323136589959856 0.6941057308074046 0.7680574729053404 0.43042891700527297 1.0 19.41383205300622 -6.248814767747464 24.91667077858459 0.7460550506734266 0.7020908439003161 0.003430973886879407 0.2383999808102684 6794.0093124999075 13409062.565387381 0.07647937823105849 0.07603163169231685 5.638781059005593e-07 6.248814767747464 -0.043964206773110526 PYPS(ph)PGAVLR ddPTM_KYSE-520_SHP099_60min_R1 1 PYPSPGAVLR 10 0 H7C053;O60828-5;O60828-4;O60828-2;O60828 H7C053 PQBP1 Polyglutamine-binding protein 1 1 PYPS(1)PGAVLR 108.7 0.0014485 0.0 163230.0 104140.0 94856.0 97787.0 78540.0 130630.0 89033.0 115230.0 100890.0 145420.0 True False 154175.30650906218 99136.9580826731 100970.56953496621 107080.64707926642 84720.65116852886 129814.68971526176 98033.32451834454 114830.29402488405 82570.91922993115 144131.69193504797 1.0696835958779995 0.6878220657213164 0.7005438441704268 0.7429361692883035 0.5878002959037467 0.9006672160190967 0.6801649463916835 0.7967039898250247 0.572885242109981 1.0 17.137028067204614 -3.9985459416836013 0.005210017716026542 1.4969039329834222 2.7078000186598747e-06 0.0017818763886348066 0.1588471797916372 362132.195169744 272.3894029741539 37545.63678041683 40764.28080047054 0.00010033537041275047 3.9985459416836013 -1.4969012251834035 PYQYPALT(ph)PEQK ddPTM_KYSE-520_SHP099_60min_R1 4 PYQYPALTPEQK 12 0 P04075;H3BQN4;J3KPS3;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 PYQYPALT(1)PEQK;PYQYPALT(1)PEQK;PYQYPALT(1)PEQK;PYQYPALT(1)PEQK 176.87 5.339400000000001e-06 3202200000.0 8203700.0 4044340.0 3933170.0 4442520.0 2862640.0 6493500.0 3779910.0 4750410.0 3849920.0 7666400.0 True False 7748624.407329492 3850043.8357218974 4186708.4314945037 4864735.765107662 3087913.481806429 6452971.657858483 4162020.1911665974 4733931.936464029 3150871.5765853557 7598481.660368942 1.0197595721976462 0.5066859417194356 0.5509927665326785 0.640224716271995 0.40638559383671613 0.8492448815814028 0.5477436647474269 0.623010247054301 0.414671208988924 1.0 22.85727973526249 -11.037955575275436 2.7498190331036723 1.4936906459100403 0.6117777527344103 0.28856086016833415 0.1799031958403233 10994110.133632852 7711539.187750855 34172779.12978823 0.042391157032442124 9.163142166749771e-12 11.037955575275436 -0.88191289317563 QAAKPPDLNPETEESIPS(ph)RSSPEGPDPPVLTEVSK ddPTM_KYSE-520_SHP099_60min_R1 1 QAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSK 35 2 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 QAAKPPDLNPETEES(0.26)IPS(0.333)RS(0.203)S(0.203)PEGPDPPVLTEVSK 154.66 1.9767e-07 1027100000.0 1731700.0 1702900.0 1445600.0 1158300.0 1151900.0 1453200.0 1443400.0 1694800.0 1912100.0 1756500.0 True False 1635639.148941633 1621090.1278949901 1538785.6890417784 1268384.4837444061 1242547.9765855402 1444130.0397628294 1589312.9582264833 1688921.134369294 1564910.8401184576 1740938.776536322 0.9395156055951678 0.9311586080701952 0.8838827130401814 0.7285635203484384 0.7137229598950324 0.8295122489235336 0.9129057148054883 0.970120923912948 0.8988890713502975 1.0 20.731434038056722 -6.8886576567029225 3.8032113434091586 0.9495787011075211 0.8335577424517447 0.34744990705217227 0.07370933249303678 0.31072873473799145 8.45342595189566 0.037927696350197895 0.024677169981752022 1.2922375102067755e-07 6.8886576567029225 -0.11602095865577633 QAAKPPDLNPETEESIPSRS(ph)SPEGPDPPVLTEVSK ddPTM_KYSE-520_SHP099_60min_R1 1 QAAKPPDLNPETEESIPSRSSPEGPDPPVLTEVSK 35 2 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 QAAKPPDLNPETEES(0.018)IPS(0.109)RS(0.437)S(0.437)PEGPDPPVLTEVSK 160.31 3.1224e-10 1044200000.0 716070.0 686840.0 586000.0 520690.0 508880.0 564550.0 526200.0 740460.0 777420.0 692540.0 True False 676348.1696498445 653843.1754321408 623774.4976331504 570176.2210488436 548925.9608688678 561026.4340408106 579393.4312171093 737891.5170846627 636260.1251633761 686404.6343879664 0.9853490722027414 0.9525622973323031 0.9087562443242241 0.8306707042519345 0.7997119095186739 0.8173406849751977 0.8440989500802631 1.0750095207946908 0.9269461383090724 1.0 19.388699767929815 -7.248607444734421 24.739934975227804 1.000733376020642 0.8740196672489601 0.431699824504032 0.0649926081585531 663.7574728422408 1279725.9105327397 0.0340746082769572 0.01950177942192648 5.641473536602818e-08 7.248607444734421 -0.12671370877168198 QAAS(ph)PLEPK ddPTM_KYSE-520_SHP099_60min_R1 4 QAASPLEPK 9 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;Q14980-4;Q14980-3;F5H6Y5;F5H4J1 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 1 QAAS(1)PLEPK;QAAS(1)PLEPK;QAAS(1)PLEPK;QAAS(1)PLEPK 130.77 0.00056714 1316340000.0 2035140.0 1972930.0 1855710.0 1446430.0 1639700.0 2053660.0 1791010.0 2128140.0 2581630.0 2283360.0 True False 1922246.7272489923 1878147.4813716968 1975332.0358409816 1583898.2723149643 1768735.0613832022 2040842.3461735009 1972062.7693731585 2120757.979051611 2112871.069596264 2263131.2068272014 0.8493748490808395 0.8298889060015071 0.8728314248338699 0.6998702804047812 0.781543313108603 0.9017781823770887 0.871386848196881 0.9370901575012124 0.9336052029252009 1.0 21.10988879774324 -7.089468961726296 1.0062854199018179 0.9759536435335558 0.8098936378943443 0.6160893086384949 0.05003798525275633 0.4054129291013515 0.7463155649642325 0.04521594297441827 0.02005500874196284 8.138250213638277e-08 7.089468961726296 -0.16606000563921153 QACTAQT(ph)PEPLRR ddPTM_KYSE-520_SHP099_60min_R1 1 QACTAQTPEPLRR 13 1 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 QACT(0.006)AQT(0.994)PEPLRR 90.348 0.0023316999999999995 0.0 215410.0 217670.0 200110.0 136280.0 180920.0 201430.0 150210.0 185500.0 215100.0 210750.0 True False 203460.77789081103 207212.8064706691 213009.41078732043 149232.01022592408 195157.37470601237 200172.80065333538 165394.69270832778 184856.5437960256 176043.26222973742 208882.9189610187 0.9740421998257333 0.9920045521258669 1.0197550467354002 0.7144289775736686 0.9342907293555786 0.9583014334010298 0.7918057327568915 0.8849768315930282 0.8427843842156871 1.0 17.67233499777643 QADFEAHNILR ddPTM_KYSE-520_SHP099_60min_R1 1 QADFEAHNILR 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 0 149.41 0.00010049 291600000.0 544500.0 511880.0 377680.0 327080.0 531480.0 551990.0 369720.0 425440.0 424690.0 461410.0 False True 514295.4995661603 487288.51645245624 402025.85710936633 358165.58485981234 573304.4522924587 548544.8256597058 407094.9057194785 423964.24793844233 347577.0015636775 457322.26637154765 1.1245800552128054 1.0655254560830039 0.8790865581487864 0.7831798519270516 1.2536114999191452 1.199471064490101 0.8901707519063541 0.9270579613414146 0.7600264127119747 1.0 18.802851638064023 -6.927637259134696 24.99977887913005 0.8878448452524972 1.0411428772855442 0.22426952246968324 0.14178440517483726 73.83981553451378 25508.36917194632 0.0643733293893977 0.04340049015942178 1.1813069005041344e-07 6.927637259134696 0.15329803203304704 QADPQPQAWPPPDS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 2 QADPQPQAWPPPDSPVR 17 0 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 QADPQPQAWPPPDS(1)PVR;QADPQPQAWPPPDS(1)PVR 64.331 0.05469299999999999 0.0 747210.0 965740.0 626420.0 595910.0 670980.0 883430.0 588260.0 888570.0 1016100.0 853750.0 True False 705760.7717737936 919344.4007947077 666800.0355074374 652545.1072331255 723782.3086460327 877916.1856782801 647727.0616643425 885487.7580637977 831601.8537965416 846186.4392074494 0.8340487853183034 1.0864560789413962 0.7880060523446488 0.7711599678249498 0.8553461449038793 1.0374973469210274 0.7654661332921066 1.046445224167334 0.9827643356887543 1.0 19.690616040011804 -7.287738668833099 24.95249678469991 1.010953601865985 0.88278487554709 0.25799297492901574 0.10292090004846938 1136.8246928103313 1078601.1444892427 0.05662964336842161 0.02721747563711765 5.155387701467715e-08 7.287738668833099 -0.1281687263188951 QADPQPQAWPPPDS(ph)PVRVDTVR ddPTM_KYSE-520_SHP099_60min_R1 2 QADPQPQAWPPPDSPVRVDTVR 22 1 Q63ZY3-3;Q63ZY3;Q63ZY3-2;K7ERU2 Q63ZY3-3 KANK2 KN motif and ankyrin repeat domain-containing protein 2 1 QADPQPQAWPPPDS(1)PVRVDTVR;QADPQPQAWPPPDS(1)PVRVDTVR 181.92 7.7257e-11 2770600000.0 282810.0 287740.0 328280.0 215900.0 224228.0 288029.0 240745.0 259970.0 315450.0 282310.0 True False 267121.96553224185 273916.53849345446 349441.4540665718 236419.07108729804 241873.4679171998 286231.3041720671 265081.8540447797 259068.22474745446 258172.23184737627 279808.9530338563 0.9546583932928002 0.9789412937773694 1.2488573016614308 0.8449303302267523 0.8644236193826637 1.022952629172783 0.9473673060515164 0.9258753944020789 0.9226732348915868 1.0 18.094082599523105 -5.3136036052336735 24.999958568258688 0.9310536308711367 1.0526332527980227 0.3028908930401141 0.08885525812372817 427.1076081224518 204692.37856353162 0.02536370658503965 0.037620489508899714 4.857316410392069e-06 5.3136036052336735 0.12157962192688598 QADVFPDRDHFGR ddPTM_KYSE-520_SHP099_60min_R1 3 QADVFPDRDHFGR 13 1 A0A0G2JM88;D6R9R1;D6RDF7;Q9HCC0-2;Q9HCC0 A0A0G2JM88 MCCC2 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial 0 ;; 145.43 8.9348e-06 1890510000.0 1196050.0 1125180.0 752780.0 692174.0 1200980.0 1153340.0 894350.0 894950.0 1031280.0 845020.0 False True 1129702.7222334365 1071124.6638703868 801305.4032905854 757958.0088502982 1295490.2933585378 1146141.5772502488 984759.6260148659 891845.6273328996 844025.5484532007 837533.7802156114 1.348844367737156 1.278903238499396 0.9567439812210325 0.9049879858638925 1.5467916924198948 1.3684720596644955 1.1757849644719442 1.064847351116162 1.007751052424319 1.0 19.675787854227988 -7.289248600251556 2.989253279693588 1.0140638001579225 1.225333192944948 0.2183974145937495 0.17835995533870264 0.49761471083314235 8.895240737910523 0.1230878574106841 0.054877248584885 5.1374948525515835e-08 7.289248600251556 0.2112693927870255 QAEATRAS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 QAEATRASPPR 11 1 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 QAEAT(0.003)RAS(0.997)PPR;QAEAT(0.002)RAS(0.998)PPR 94.09 0.0024593 493290000.0 635150.0 569700.0 456120.0 421840.0 497680.0 497960.0 408120.0 456980.0 647450.0 473270.0 True False 599916.9633598652 542330.7568628666 485522.2250178032 461931.5467691797 536844.5845881519 494852.04693111713 449376.7524673633 455394.84303993423 529889.4008863012 469077.19599848817 1.2789301387437277 1.1561652569966638 1.0350582572753506 0.9847665815130959 1.1444695866005863 1.0549479939602777 0.9580017027065448 0.9708313406081713 1.12964221114686 1.0 18.83946584092926 -4.492726909869679 2.2980539406127747 1.0330729385234498 1.2890833575300082 0.6305136205408295 0.05960472242822236 0.25229303483621107 2.183161653515018 0.016542735156471772 0.10622616988044235 3.215681966493895e-05 4.492726909869679 0.2560104190065584 QAEATRAS(ph)PPRSPAEPK ddPTM_KYSE-520_SHP099_60min_R1 3 QAEATRASPPRSPAEPK 17 2 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 QAEAT(0.099)RAS(0.9)PPRS(0.001)PAEPK;QAEAT(0.034)RAS(0.965)PPRS(0.002)PAEPK;QAEAT(0.003)RAS(0.995)PPRS(0.003)PAEPK 109.05 0.00012917 2225280000.0 2203420.0 2123560.0 2010220.0 1365840.0 1588470.0 1639350.0 1218840.0 1260780.0 2586610.0 1578610.0 True False 2081191.9001911285 2021540.990071454 2139801.9976657233 1495649.0229452318 1713473.5518420301 1629118.2085639923 1342052.2419320813 1256406.6484482626 2116946.827131849 1564624.7435399957 1.3301540249723962 1.2920292858833844 1.3676135485524645 0.955915486521896 1.0951338708636684 1.0412197654998596 0.8577470396484083 0.8030082955262593 1.3530061031389629 1.0 20.577385254884277 -5.260637486550101 24.99161961378493 1.0048000224134719 1.3261420007805358 0.5109748411616339 0.14085133128022828 56.65021174807985 1765524.866295217 0.03877286626360299 0.06246569443860413 5.48734812668816e-06 5.260637486550101 0.3213419783670639 QAEEECAHRGS(ph)PLPK ddPTM_KYSE-520_SHP099_60min_R1 8 QAEEECAHRGSPLPK 15 1 F2Z2A4;H7C1J2;H7C1M5;Q9H147 F2Z2A4 DNTTIP1 Deoxynucleotidyltransferase terminal-interacting protein 1 1 QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK;QAEEECAHRGS(1)PLPK 174.02 1.4688e-08 6296050000.0 3323760.0 3306760.0 3275150.0 2711610.0 2909560.0 2751446.0 2726100.0 2665263.0 3709880.0 2771330.0 True False 3139384.407048704 3147898.2860520487 3486271.4094252777 2969320.599124729 3138525.8188681537 2734273.204916931 3001680.792172107 2656017.8247300605 3036259.310464239 2746778.172262111 1.1429333605280771 1.1460329479244387 1.2692220451694345 1.0810194391050307 1.1426207804336157 0.9954474054470581 1.0928005845117337 0.9669575255662873 1.1053893398183392 1.0 21.38930897347667 -5.912909678542233 1.5429806990579238 1.0333438260707395 1.176475400716174 0.519331718437199 0.0592990925119537 0.2977490733634612 1.4623084386717728 0.02182072406956724 0.02609610191165752 1.2220537877377349e-06 5.912909678542233 0.14313157464543447 QAEVANQETKEDLPAENGETKTEESPAS(ph)DEAGEK ddPTM_KYSE-520_SHP099_60min_R1 1 QAEVANQETKEDLPAENGETKTEESPASDEAGEK 34 2 A6NEL0;P05114;A6NL93 A6NEL0 HMGN1 Non-histone chromosomal protein HMG-14 1 QAEVANQETKEDLPAENGETKTEESPAS(1)DEAGEK 315.62 1.6001999999999996e-67 736390000.0 247120.0 254810.0 253150.0 168730.0 187930.0 205800.0 161350.0 172730.0 321150.0 187390.0 True False 233411.7609784933 242568.5451223926 269468.4540543211 184766.04846947585 202719.02182456834 204515.52586236628 177660.83262425038 172130.83994548494 262837.2555326828 185729.87038721392 1.2567270977569256 1.3060287212642754 1.450862230682265 0.9948106251529242 1.0914723700713032 1.1011450416456308 0.9565549809185727 0.9267805958547357 1.4151587732480169 1.0 17.502846332758008 -5.267543409289912 24.994234789294683 1.0639050020896044 1.3346882897608852 0.44942593128980557 0.13605393616572753 428.1019008876847 1752953.1001948458 0.037435389845744675 0.05712919401627026 5.400781293220764e-06 5.267543409289912 0.2707832876712808 QAFT(ph)PSSTMMEVFLQEK ddPTM_KYSE-520_SHP099_60min_R1 3 QAFTPSSTMMEVFLQEK 17 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 QAFT(0.995)PS(0.004)S(0.001)TMMEVFLQEK;QAFT(0.959)PS(0.035)S(0.005)T(0.001)MMEVFLQEK;QAFT(0.982)PS(0.018)STMMEVFLQEK 167.53 1.5533e-07 141001000.0 174649.0 256830.0 211597.0 160030.0 150248.0 217527.0 160732.0 217844.0 233178.0 221756.0 True False 164960.87181585006 244491.5012903105 225236.88118717057 175239.20308522607 162071.6628058199 216169.33330545636 176980.35915315177 217088.3500091717 190838.75313903159 219791.41436355718 0.7505337380603417 1.1123796714183607 1.0247756120928637 0.7972977633938091 0.7373885066217237 0.9835203705814025 0.805219620000299 0.9877016836066475 0.8682721010355984 1.0 17.74577550632432 -10.972887139798095 0.8821265352934637 1.0933213408029572 0.9013888402668323 0.06114950160319632 0.12032524628705589 3123.532447927312 461.0619599018076 594.7894536669643 0.03942483232011877 1.0644195932382242e-11 10.972887139798095 -0.19193250053612487 QAGEVTYADAHK ddPTM_KYSE-520_SHP099_60min_R1 3 QAGEVTYADAHK 12 0 Q08170;A0A0D9SEM4;Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;A0A590UK01;A0A590UK80 Q08170;Q13247;A0A590UK01;A0A590UK80 SRSF4;SRSF6 Serine/arginine-rich splicing factor 4;Serine/arginine-rich splicing factor 6 0 ;; 128.96 0.00012874 1204820000.0 1759740.0 1593480.0 1118290.0 1075730.0 1445330.0 1684040.0 1241300.0 1506910.0 1465900.0 1432370.0 False True 1662123.714245279 1516926.8289377585 1190376.7627272648 1177967.0557699834 1559069.2481972189 1673529.2816970786 1366782.7179205604 1501682.8809254367 1199729.5123318082 1419680.316166998 1.17077323346488 1.0684988808137574 0.8384822619370881 0.8297410637842628 1.0981833236982237 1.1788071318868807 0.9627397818762071 1.0577612888089045 0.8450701884569084 1.0 20.43713466933309 -7.620253480765646 0.007019956592607084 1.4200973448704694e-07 1.988831292316584 0.024159700643429538 0.12457090338532419 15077.059326998908 100.47415277078183 14271.369130465773 14182.93935722165 2.3974332222355416e-08 7.620253480765646 1.9888311503068496 QAGIGGEPAAAGAGCS(ph)PRPK ddPTM_KYSE-520_SHP099_60min_R1 4 QAGIGGEPAAAGAGCSPRPK 20 1 Q68DK7;J3KSZ8;J3QQY0 Q68DK7;J3QQY0 MSL1 Male-specific lethal 1 homolog 1 QAGIGGEPAAAGAGCS(1)PRPK;QAGIGGEPAAAGAGCS(1)PRPK;QAGIGGEPAAAGAGCS(1)PRPK;QAGIGGEPAAAGAGCS(1)PRPK 176.68 1.7744000000000002e-09 3165460000.0 2781900.0 2680730.0 2389180.0 2003760.0 2272780.0 2640000.0 2316080.0 2536530.0 3062890.0 2725320.0 True False 2627582.4614198375 2551943.7069422365 2543190.3656231575 2194196.747947589 2451634.8556507346 2623522.78074172 2550211.9691625317 2527731.3694605543 2506746.385173592 2701175.785066873 0.9727550779723826 0.9447529187290779 0.9415123516517812 0.812311719984291 0.9076176638352471 0.9712521470263252 0.9441118135521107 0.935789289773296 0.9280204565107681 1.0 21.365156098838632 -6.246631662672047 23.93039470256372 0.9510888892980852 0.9130792292897116 0.1675892381239409 0.04378419363867289 982.4200911240139 1587665.1573274045 0.015515827413575187 0.015444949105938565 5.66719736168483e-07 6.246631662672047 -0.03800966000837358 QAHDLS(ph)PAAESSSTFSFSGR ddPTM_KYSE-520_SHP099_60min_R1 8 QAHDLSPAAESSSTFSFSGR 20 0 O95425-2;O95425-3;A0A6I8PIX7;O95425-4;O95425 O95425-2 SVIL Supervillin 1 QAHDLS(1)PAAESSSTFSFSGR;QAHDLS(1)PAAESSSTFSFSGR;QAHDLS(0.999)PAAES(0.001)SSTFSFSGR;QAHDLS(0.962)PAAES(0.037)S(0.001)STFSFSGR;QAHDLS(0.988)PAAES(0.012)SSTFSFSGR;QAHDLS(0.717)PAAES(0.257)S(0.026)STFSFSGR;QAHDLS(0.975)PAAES(0.022)S(0.003)STFSFSGR;QAHDLS(0.483)PAAES(0.374)S(0.108)S(0.031)T(0.003)FSFSGR 359.27 6.1298e-78 5196350000.0 2869220.0 3176790.0 3011470.0 3039119.0 2775710.0 2678833.0 2795370.0 2995110.0 3846080.0 2978520.0 True False 2710058.6469517336 3024172.239940992 3205594.174722365 3327955.956015552 2994142.585370477 2662113.4095843537 3077953.2797821555 2984720.6624739286 3147728.823786836 2952132.6300534927 0.9180003023450296 1.0244025655060742 1.0858570994028407 1.12730570508116 1.0142303753189514 0.9017594204553459 1.0426202564369145 1.011038810414099 1.066255896412689 1.0 21.49332610793865 -5.984104702558248 24.9584360045664 1.0019262049740723 1.0449057909513308 0.05774335893911331 0.06395826013429796 657.1923257063871 1031903.9525357112 0.021028724312466062 0.023836165333198638 1.037278311821468e-06 5.984104702558248 0.042979585977258594 QAIEEEGGDPDNIELTVSTDT(ph)PNKKPTK ddPTM_KYSE-520_SHP099_60min_R1 2 QAIEEEGGDPDNIELTVSTDTPNKKPTK 28 2 Q9NWH9;H7BXE3;H0YL55;H0YMW8;H0YNF3;H0YMR6;H0YLE6;H0YKU6 Q9NWH9 SLTM SAFB-like transcription modulator 1 QAIEEEGGDPDNIELT(0.004)VS(0.075)T(0.075)DT(0.837)PNKKPT(0.009)K;QAIEEEGGDPDNIELT(0.001)VS(0.003)T(0.011)DT(0.937)PNKKPT(0.048)K 103.73 0.0014557 3627100000.0 1608320.0 1581370.0 1355380.0 1261770.0 1277460.0 1604240.0 1384580.0 1567350.0 1909990.0 1893610.0 True False 1519103.2834935675 1505398.611515237 1442749.9634846777 1381688.2414350156 1377988.834246864 1594227.343097385 1524546.858598605 1561913.22867224 1563183.962929689 1876834.0886062852 0.8093966817395328 0.8020946660411141 0.7687147053877559 0.7361802781731447 0.7342091890872157 0.8494236932158662 0.8122970846776955 0.8322063405359917 0.8328834031837578 1.0 20.839869691456588 -8.752056713306262 0.4664393551038681 1.0191240005538484 0.7741627518232496 0.8039362102883127 0.031633386124792356 1.3434549296188578 0.4507330720216259 0.08728971932331496 0.01987500903026685 1.7698778198130298e-09 8.752056713306262 -0.24496124873059888 QAIELS(ph)PDNQYVK ddPTM_KYSE-520_SHP099_60min_R1 1 QAIELSPDNQYVK 13 0 O14879 O14879 IFIT3 Interferon-induced protein with tetratricopeptide repeats 3 1 QAIELS(1)PDNQYVK 96.096 0.0019442 1315700000.0 268080.0 289050.0 238540.0 215390.0 237010.0 300800.0 213270.0 309230.0 325570.0 301670.0 True False 253209.0679957689 275163.60412710474 253916.67007749487 235860.600840635 255661.338597568 298922.59562390554 234829.41291461975 308157.3533048242 266454.694951816 298997.4384957088 0.8468603251910566 0.9202874964798532 0.8492269076115817 0.7888381988396869 0.8550619693728154 0.999749687247557 0.7853893802437709 1.0306354290364492 0.8911604604119047 1.0 18.189773599377357 -7.346398762898315 0.6602283238994572 0.9914623612290918 0.856230562143466 0.2707014234406392 0.07160871987179102 0.9458586344486299 0.8401406249154327 0.06639468060920388 0.03321446870056055 4.504029611534621e-08 7.346398762898315 -0.13523179908562577 QALAPGLS(ph)PSQRPGGSSSACSR ddPTM_KYSE-520_SHP099_60min_R1 1 QALAPGLSPSQRPGGSSSACSR 22 1 Q9BWK5-3;Q9BWK5-2;Q9BWK5 Q9BWK5-3 MRI Modulator of retrovirus infection homolog 1 QALAPGLS(0.902)PS(0.098)QRPGGSSSACSR 125.86 4.6203000000000005e-05 761010000.0 186150.0 229190.0 189030.0 188170.0 187230.0 194770.0 180280.0 242840.0 237230.0 252230.0 True False 175823.8884191748 218179.36837879667 201215.1762586936 206053.62022462636 201963.93580702366 193554.36818373698 198504.46176324665 241997.64471928225 194155.01208163917 249995.4384319709 0.7033083864328998 0.8727333976462452 0.8048753910101786 0.824229520014614 0.8078704838527778 0.7742315995753949 0.7940323351830436 0.9680082414189128 0.7766342190058516 1.0 17.93154224527772 -13.999999999999998 0.16161461676925162 1.7004614454233373 0.7689994987602784 0.46477162576282516 0.06300283416023128 118.1543409821708 1.090154235914883 26.361642958269726 0.2526613802649196 1.0000000000000041e-14 13.999999999999998 -0.9314619466630589 QALDYVELSPLTQAS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 5 QALDYVELSPLTQASPQR 18 0 F6WYE2;F6TR96;H0Y5J9;Q9H2D6-6;Q9H2D6-5;Q9H2D6-7;Q9H2D6-3;Q9H2D6-2;Q9H2D6 F6WYE2 TRIOBP TRIO and F-actin-binding protein 1 QALDYVELSPLTQAS(1)PQR;QALDYVELSPLT(0.058)QAS(0.942)PQR;QALDYVELSPLTQAS(1)PQR;QALDYVELSPLTQAS(1)PQR;QALDYVELSPLTQAS(1)PQR 272.19 3.9566e-30 2104274000.0 2226607.0 2481510.0 1753474.0 1439858.0 1592579.0 2161700.0 1499239.0 1766939.0 2041366.0 2088130.0 True False 2103092.6710789907 2362294.5347775524 1866505.7396975956 1576701.671410906 1717905.9067650156 2148208.028458099 1650796.7092826075 1760809.901015664 1670705.3930491381 2069630.7927405569 1.016168042365723 1.1414086720508525 0.9018544497137154 0.7618275090133706 0.8300542844601788 1.037966789049119 0.7976285988172127 0.8507845492016672 0.8072480361759736 1.0 20.980941993575243 -4.8601742091299736 5.765933229812115 0.863408937689991 1.077089907795927 0.4697630435677287 0.08744140833207771 0.15726269391592965 7.55665126136147 0.022719350831268907 0.04891461779583953 1.379830660246639e-05 4.8601742091299736 0.213680970105936 QALEVDFEKMKK ddPTM_KYSE-520_SHP099_60min_R1 1 QALEVDFEKMKK 12 2 Q5TB80-2;Q5TB80 Q5TB80-2 CEP162 Centrosomal protein of 162 kDa 0 57.225 0.033852 2327400000.0 1142500.0 1099300.0 1267200.0 1015400.0 1131600.0 1072700.0 1110800.0 1090200.0 1249500.0 1186400.0 False True 1079123.247482716 1046487.97791706 1348885.7395916888 1111903.3107088583 1220650.4820767415 1066004.881402139 1223090.504363293 1086418.3506545934 1022622.2973317364 1175889.4190052333 0.9177081025149639 0.8899544132324594 1.1471195486500807 0.945584927237031 1.0380657078361797 0.9065519802907546 1.040140751838715 0.9239120049006566 0.8696585587077089 1.0 20.16532096440162 -7.3900363514213865 11.866593909679537 0.9221883278514954 0.9839389244584216 0.08156459836518959 0.07887322843696185 1.2712757096374276 114.75410670505023 0.042206881249775896 0.020258411674416447 4.0734618058895046e-08 7.3900363514213865 0.06175059660692617 QALPPFQPQITDDYGLDNFDTQFTSEPVQLT(ph)PDDEDAIKR ddPTM_KYSE-520_SHP099_60min_R1 2 QALPPFQPQITDDYGLDNFDTQFTSEPVQLTPDDEDAIKR 40 1 Q05513-2;Q05513-3;Q05513 Q05513-2 PRKCZ Protein kinase C zeta type 1 QALPPFQPQITDDYGLDNFDTQFTSEPVQLT(1)PDDEDAIKR;QALPPFQPQITDDYGLDNFDTQFTSEPVQLT(1)PDDEDAIKR 197.89 4.852800000000001e-16 147726000.0 134318.0 178758.0 129386.0 113453.0 128877.0 158424.0 127627.0 159121.0 177786.0 161382.0 True False 126867.11278370542 170170.19735877166 137726.4285849195 124235.53900911163 139018.88669017665 157435.2170516011 140528.78267948685 158569.0463901205 145504.5440203443 159952.28103329605 0.7931560085554294 1.0638810291386132 0.8610469803569104 0.7767037656890335 0.8691272534040207 0.9842636568516895 0.8785669186564088 0.9913522043309428 0.909674704733068 1.0 17.28728204089452 -6.245598088676524 23.52135995835301 0.947593224005772 0.8774098175405974 0.19616584700615147 0.08034721953592582 756.946641985914 1123923.7018944353 0.026988122763736227 0.02688579124038531 5.680700741691142e-07 6.245598088676524 -0.07018340646517451 QALQST(ph)PLGSSSK ddPTM_KYSE-520_SHP099_60min_R1 1 QALQSTPLGSSSK 13 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3 O15027 SEC16A Protein transport protein Sec16A 1 QALQS(0.022)T(0.978)PLGSSSK 143.97 0.019594999999999998 0.0 324340.0 478140.0 283630.0 250940.0 270010.0 344310.0 289230.0 348570.0 376090.0 370530.0 True False 306348.2136442393 455169.43669722864 301913.2436240457 274789.26215213764 291258.2508532528 342161.0335746904 318468.19101277983 347360.89202684985 307801.53645737754 367247.39246797794 0.8341739653630115 1.2394082191799825 0.8220977189112948 0.7482401993530773 0.7930845986296525 0.9316908454415372 0.8671761802653196 0.9458498525816977 0.8381313054093807 1.0 18.486392721823208 -4.819197694575577 24.99995353905826 0.8616017167647697 1.036802093810506 0.25317577675057 0.11530831288466872 85.81195514529587 37142.09382671642 0.02884634875675958 0.0600485308408478 1.5163599502655369e-05 4.819197694575577 0.17520037704573632 QALYLMFDTSQES(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 QALYLMFDTSQESPVK 16 0 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3;H0Y911;Q4VXL4;O95359-2 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 1 QALYLMFDTSQES(1)PVK;QALYLMFDTSQES(1)PVK 303.45 3.4689e-38 118510000.0 412600.0 445410.0 324610.0 277050.0 319130.0 388880.0 272370.0 351380.0 412770.0 352220.0 True False 389712.25550229166 424011.83502595953 345534.87999436376 303380.7487018804 344243.715398683 386452.85567228857 299903.8176750361 350161.1447927089 337821.37308493076 349099.60482301307 1.1163354243837327 1.2145869808157632 0.9897888030252668 0.8690377889590816 0.9860902465736335 1.1069988345252149 0.859078078381331 1.003040793959747 0.9676933700804383 1.0 18.41327919821318 -4.813169070430176 7.120269485048108 0.9696095365923335 1.1650449358769321 0.5500451427354889 0.06974958098465914 0.1347704561324466 14.917081829811519 0.018169072693963857 0.038772798238921324 1.5375559547008748e-05 4.813169070430176 0.19543539928459863 QAPAS(ph)PQEAALDLDVVLIPPPEAFR ddPTM_KYSE-520_SHP099_60min_R1 5 QAPASPQEAALDLDVVLIPPPEAFR 25 0 Q9BW04 Q9BW04 SARG Specifically androgen-regulated gene protein 1 QAPAS(1)PQEAALDLDVVLIPPPEAFR;QAPAS(1)PQEAALDLDVVLIPPPEAFR;QAPAS(1)PQEAALDLDVVLIPPPEAFR;QAPAS(1)PQEAALDLDVVLIPPPEAFR;QAPAS(1)PQEAALDLDVVLIPPPEAFR 131.37 3.0809e-05 252761000.0 143188.0 208868.0 133184.0 133639.0 137738.0 169839.0 125323.0 167733.0 202110.0 179563.0 True False 135245.0762017986 198833.6677627401 141769.25374193446 146340.01037996938 148577.19697798346 168778.97180242193 137991.87187461395 167151.17337217648 165411.91877848544 177972.2115179002 0.7599224342289854 1.1172174918034419 0.7965808399682414 0.8222632574594416 0.8348336839262109 0.9483445216695887 0.7753562800490059 0.9391981587831459 0.9294255399071025 1.0 17.441292471611657 -7.84705580777084 1.8105842785136488 0.9938193147960763 0.8728738394899074 0.1455422375380655 0.10018863378737353 0.6584166938232935 4.508318584475763 0.09175772381976069 0.026636108631797033 1.4221460265709845e-08 7.84705580777084 -0.12094547530616895 QAPLPS(ph)PESLDLGR ddPTM_KYSE-520_SHP099_60min_R1 1 QAPLPSPESLDLGR 14 0 H3BRS1;Q12968 H3BRS1 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 1 QAPLPS(0.956)PES(0.044)LDLGR 164.48 3.4942e-08 121600000.0 165140.0 165470.0 143640.0 130440.0 133920.0 181610.0 158590.0 159520.0 196970.0 195290.0 True False 155979.35500157144 157520.57282446648 152899.2642321258 142836.97838178385 144458.7420994317 180476.50462519084 174621.82488924632 158966.662352248 161205.21320962955 193559.88253332098 0.8058454725230569 0.8138079583580529 0.7899326153279953 0.7379472260074074 0.7463258409167683 0.9324065620577247 0.9021591799074661 0.8212789771913722 0.8328441363973156 1.0 17.562420443228685 -6.257287444748586 24.999662994209604 0.8868440459569618 0.7790702839339829 0.5618024803290709 0.05209073900985491 314.25819028507345 1892217.280703246 0.01810877407239285 0.01748312479110902 5.529839867715018e-07 6.257287444748586 -0.10777376202297884 QAPPHIELSNSS(ph)PDPMAEAER ddPTM_KYSE-520_SHP099_60min_R1 8 QAPPHIELSNSSPDPMAEAER 21 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 QAPPHIELSNS(0.013)S(0.987)PDPMAEAER;QAPPHIELSNS(0.054)S(0.946)PDPMAEAER;QAPPHIELSNS(0.061)S(0.939)PDPMAEAER;QAPPHIELSNS(0.038)S(0.962)PDPMAEAER;QAPPHIELSNS(0.02)S(0.98)PDPMAEAER;QAPPHIELSNS(0.084)S(0.916)PDPMAEAER;QAPPHIELSNS(0.014)S(0.986)PDPMAEAER;QAPPHIELSNS(0.018)S(0.982)PDPMAEAER 246.63 7.2101e-27 5753930000.0 2085210.0 2122280.0 1962980.0 1946070.0 1911460.0 2127630.0 1673990.0 2113640.0 2463910.0 1989500.0 True False 1969539.2445369214 2020322.4831927747 2089516.8316790485 2131023.907692722 2061881.0272803137 2114350.6719657253 1843213.2457680127 2106308.276167283 2016526.0541165576 1971874.5778075762 0.9988156785949077 1.0245694659946705 1.0596601098241616 1.0807096615962744 1.04564511885579 1.0722541361208484 0.9347517669290025 1.0681755827032247 1.0226441766689984 1.0 20.911136360528086 -9.356272812677009 9.162584158675319 1.0000188686545086 1.0355130274674076 0.057437956153737035 0.041146232430934876 0.0 0.0 0.03994621541274019 0.009688380322964941 4.4027820512202183e-10 9.356272812677009 0.03549415881289897 QAQAQES(ph)EEEEESR ddPTM_KYSE-520_SHP099_60min_R1 12 QAQAQESEEEEESR 14 0 H0YLQ7;Q9NVM6 H0YLQ7 DNAJC17 DnaJ homolog subfamily C member 17 1 QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR;QAQAQES(1)EEEEESR 339.9 8.1437e-47 4009324000.0 1671839.0 1532344.0 1489638.0 1303469.0 1460894.0 1457807.0 1421148.0 1433078.0 1727993.0 1492136.0 True False 1579098.7579415804 1458727.8941447632 1585662.4489850732 1427350.3018577548 1575858.0464501756 1448708.2857669503 1564811.5089078934 1428106.9869009203 1414233.030358672 1478916.8359042432 1.0677400646237716 0.9863488322876952 1.0721782391608 0.9651322286726425 1.0655487909748897 0.9795738682501219 1.0580794476865445 0.9656438768091672 0.956262716080298 1.0 20.49610949681058 -7.281566715177906 24.47000303871627 0.9707149588663043 1.0250994762789538 0.28551788599285177 0.03875682832955293 769.6355391254563 935685.5248339114 0.01907131047562329 0.009179081767958478 5.22917630778534e-08 7.281566715177906 0.05438451741264949 QAQT(ph)QTSPEHLVLQQK ddPTM_KYSE-520_SHP099_60min_R1 1 QAQTQTSPEHLVLQQK 16 0 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 QAQT(0.67)QT(0.165)S(0.165)PEHLVLQQK 220.34 1.0789000000000002e-17 992150000.0 560070.0 586750.0 416400.0 353110.0 432280.0 514200.0 359170.0 488330.0 543300.0 486720.0 True False 529001.8006281349 558561.6492702941 443241.81026355596 386669.4682336071 466297.9766632495 510990.68706719426 395478.4087614014 486636.0972070793 444650.4154784573 482408.03946243005 1.0965857891125248 1.1578614027509277 0.9188109940238167 0.8015402659219591 0.9666049039789371 1.0592499404375915 0.8198006177552547 1.0087644844173012 0.9217309395878894 1.0 18.879894424784123 -4.764261987599473 24.999931492036772 0.9337666506212198 1.127223632913315 0.49240135202247015 0.07717118035219458 53.88001208101979 477235.5906180989 0.020115027186541 0.04509149533045485 1.7208301731745985e-05 4.764261987599473 0.19345698229209518 QAQTQT(ph)SPEHLVLQQK ddPTM_KYSE-520_SHP099_60min_R1 1 QAQTQTSPEHLVLQQK 16 0 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 QAQT(0.306)QT(0.572)S(0.122)PEHLVLQQK 203.71 1.1371e-12 829450000.0 619210.0 583090.0 581280.0 437510.0 497020.0 581890.0 464590.0 644320.0 688340.0 560290.0 True False 584861.1869354682 555077.4811640661 618750.2388808839 479090.8188578219 536132.6463430375 578258.2086688644 511555.29116145376 642085.0043054188 563354.8076393189 555326.2664990244 1.05318480723529 0.9995520014989987 1.1142102871915405 0.8627195358112304 0.9654372189578023 1.0412945390003092 0.9211797136600102 1.1562302074298638 1.014457340890625 1.0 19.08297611032986 -7.251730050149509 24.996162756650687 1.0640078355476967 0.9944595383458812 0.12229491964623707 0.07657234048092473 1292.0171613640455 3326239.88967176 0.03600468656570731 0.020460409894124048 5.601056451830626e-08 7.251730050149509 -0.06954829720181555 QAQTQTS(ph)PEHLVLQQK ddPTM_KYSE-520_SHP099_60min_R1 5 QAQTQTSPEHLVLQQK 16 0 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 QAQT(0.041)QT(0.172)S(0.787)PEHLVLQQK;QAQT(0.078)QT(0.027)S(0.895)PEHLVLQQK;QAQTQT(0.037)S(0.963)PEHLVLQQK;QAQT(0.228)QT(0.08)S(0.691)PEHLVLQQK;QAQTQT(0.3)S(0.7)PEHLVLQQK 249.12 2.0239e-23 3455580000.0 2842170.0 2954120.0 2424600.0 1982160.0 2224970.0 2839450.0 2279950.0 2476890.0 3150000.0 2839500.0 True False 2684509.1643745694 2812199.640975478 2580893.5954971663 2170543.890441863 2400062.480652426 2821727.9393095025 2510429.596167708 2468298.246700473 2578039.4050379964 2814344.239097572 0.9538666688604396 0.9992379759049016 0.9170497196621327 0.7712432119312648 0.8527963449922576 1.0026235952622122 0.8920122710264771 0.8770420520738929 0.9160355614012068 1.0 21.424367373259212 -9.336653761354976 14.348911022336218 0.9999992411867605 0.9075802171156555 0.14855661129140552 0.06519354301920924 0.0 0.0 0.06845702507668655 0.016603267365102096 4.6062365665464454e-10 9.336653761354976 -0.09241902407110503 QAQYLGMSCDGPFKPDHYR ddPTM_KYSE-520_SHP099_60min_R1 1 QAQYLGMSCDGPFKPDHYR 19 1 P23526;P23526-2 P23526 AHCY Adenosylhomocysteinase 0 132.59 6.7938999999999994e-06 787600000.0 667160.0 476660.0 385100.0 404160.0 697590.0 571020.0 495290.0 443160.0 416180.0 414590.0 False True 630151.3048495121 453760.538118754 409924.16218178574 442571.24488486466 752486.3642558443 567456.0523708866 545358.7467645803 441622.78139432194 340612.2030440358 410917.0551461387 1.5335243377167804 1.1042630926024193 0.997583714397058 1.0770330394961787 1.8312366323861387 1.380950353031894 1.32717476662201 1.0747248766232471 0.8289074371052824 1.0 18.648487685361278 -7.437458013224847 3.325770413251062 0.9183457411891315 1.3130621657585995 0.34044021197937213 0.23182973624138228 0.3245307177258359 6.743371622404288 0.16967542584151687 0.06792729527185268 3.652094333105057e-08 7.437458013224847 0.394716424569468 QAS(ph)ESSSRPH ddPTM_KYSE-520_SHP099_60min_R1 9 QASESSSRPH 10 1 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 QAS(0.982)ES(0.017)SSRPH;QAS(0.987)ES(0.013)SSRPH;QAS(0.967)ES(0.033)SSRPH;QAS(0.987)ES(0.013)SSRPH;QAS(0.992)ES(0.005)S(0.002)S(0.001)RPH;QAS(0.976)ES(0.023)SSRPH;QAS(0.976)ES(0.023)SSRPH;QAS(0.996)ES(0.004)SSRPH;QAS(0.933)ES(0.066)S(0.001)SRPH 131.32 0.00022379 2102082000.0 863317.0 1110020.0 1112229.0 1967133.0 1006173.0 1079227.0 1118357.0 932421.0 1217111.0 1173124.0 True False 815427.0850302273 1056692.9730260107 1183925.0609693197 2154088.7288798993 1085353.0907587497 1072491.1439740697 1231411.439672506 929186.6491796976 996114.323271492 1162731.0340366622 0.7013032775080432 0.9088025881252018 1.018227798443702 1.8526113656754588 0.9334515541317592 0.922389712305772 1.0590681796781543 0.7991415228282273 0.8567022760313486 1.0 20.14908597676407 -5.947731151864636 24.999907137914082 0.9236513820237865 1.1347446433312056 0.09716156964361666 0.28495321589887945 247.71139247196047 118477.61616915636 0.094315879246944 0.10694417258270525 1.1278954589492117e-06 5.947731151864636 0.21109326130741912 QAS(ph)LDGLQQLR ddPTM_KYSE-520_SHP099_60min_R1 2 QASLDGLQQLR 11 0 Q3MII6 Q3MII6 TBC1D25 TBC1 domain family member 25 1 QAS(1)LDGLQQLR;QAS(1)LDGLQQLR 167.61 1.4995e-05 1216000000.0 535520.0 551390.0 551390.0 464120.0 532170.0 564070.0 538410.0 647750.0 684560.0 489960.0 True False 505813.638067346 524900.3967467361 586933.4816551926 508229.82525723364 574048.7513668957 560549.4298988574 592837.7371752259 645503.1064359862 560261.160353272 485619.3355831114 1.0415846343103001 1.0808885855347126 1.2086287317007824 1.0465601099819728 1.1820961590781842 1.1542980042707176 1.2207869286410746 1.329236830450528 1.1537043921048444 1.0 18.88946634000593 -5.877473519803833 7.548244041698177 1.1922257735249888 1.1018221469588823 0.13981640342876456 0.08832352564448939 0.3910339543639686 24.279204621901773 0.027102949273543838 0.03080695598190356 1.3259479621949465e-06 5.877473519803833 -0.09040362656610657 QAS(ph)PAWK ddPTM_KYSE-520_SHP099_60min_R1 2 QASPAWK 7 0 A0A2R8Y7W8;A0A2R8Y6W5;Q16626 A0A2R8Y7W8 MEA1 Male-enhanced antigen 1 1 QAS(1)PAWK;QAS(1)PAWK 92.538 0.006916299999999999 915670000.0 1758750.0 1573770.0 1580000.0 1440530.0 1691070.0 1606610.0 1633110.0 1580340.0 2034230.0 1643590.0 True False 1661188.6315187945 1498163.726923072 1681849.3280893818 1577437.5380888635 1824147.588127885 1596582.5510482802 1798200.6964176616 1574858.169394129 1664865.110765216 1629029.0712936698 1.0197415508365273 0.919666661156223 1.0324243794825378 0.9683298879596817 1.1197759575151502 0.9800822951430679 1.103848131445344 0.9667465100199091 1.0219984038977816 1.0 20.63558091943498 -5.187671192760655 1.9813666617650019 1.0294058902540104 0.9747077139372197 0.09842182332548532 0.05557380915654542 0.6734703069890335 5.134724725509382 0.01585921479844032 0.034113980491986065 6.491257049388101e-06 5.187671192760655 -0.05469817631679075 QAS(ph)PTEVVER ddPTM_KYSE-520_SHP099_60min_R1 1 QASPTEVVER 10 0 Q8TB72-4;Q8TB72-3;Q8TB72;C9JW01;A0A0A0MR59;Q8TB72-2;A0A0C4DG68 Q8TB72-4 PUM2 Pumilio homolog 2 1 QAS(0.939)PT(0.061)EVVER 95.428 0.0038802 720560000.0 1862300.0 1601300.0 1615500.0 1227700.0 1604800.0 1588400.0 1437500.0 1592000.0 1892600.0 1657500.0 True False 1758994.5065969888 1524371.1443996972 1719637.7148913934 1344380.2388785349 1731088.6299370378 1578486.2064129377 1582816.528648032 1586477.7235755923 1548951.5485634631 1642815.8395154881 1.0707192274916006 0.9279014164176044 1.046762317192268 0.8183389802687986 1.0537326146353592 0.9608418475429826 0.9634777621299588 0.965706371593963 0.9428637777319531 1.0 20.647739331834302 -4.248718947707761 24.035365123628743 0.9639917244683514 1.070719344487855 0.20611006985533387 0.06259212772780287 1839.6915358080655 3476008.9602105636 0.014386670202021135 0.24204921045886776 5.640025301925954e-05 4.248718947707761 0.10672762001950375 QAS(ph)TDAGTAGALTPQHVR ddPTM_KYSE-520_SHP099_60min_R1 11 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937;P46937-7;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QAS(0.903)T(0.097)DAGTAGALTPQHVR;QAS(0.956)T(0.044)DAGTAGALTPQHVR;QAS(0.864)T(0.108)DAGT(0.024)AGALT(0.003)PQHVR;QAS(0.922)T(0.078)DAGTAGALTPQHVR;QAS(0.942)T(0.058)DAGTAGALTPQHVR;QAS(0.5)T(0.5)DAGTAGALTPQHVR;QAS(0.939)T(0.061)DAGTAGALTPQHVR;QAS(0.499)T(0.499)DAGT(0.002)AGALTPQHVR;QAS(0.862)T(0.138)DAGTAGALTPQHVR;QAS(0.5)T(0.5)DAGTAGALTPQHVR;QAS(0.779)T(0.221)DAGTAGALTPQHVR 312.61 1.3658e-47 24804190000.0 5894860.0 5437950.0 5208310.0 4637987.0 4309930.0 4149315.0 4376773.0 4461983.0 5893710.0 4453608.0 True False 5567860.364687931 5176702.719470642 5544045.996190639 5078779.890018356 4649096.970852781 4123417.585974747 4819219.928028132 4446505.422407666 4823560.8323385585 4414152.497974594 1.2613656567693816 1.1727512182340638 1.2559706531966193 1.1505673835121741 1.0532252732514316 0.9341357345190839 1.0917656175765111 1.0073293626461517 1.0927490236351867 1.0 22.073705041323052 -5.64562879172494 2.7980133542326575 1.0267617912790101 1.2232539737963262 0.7763119661754899 0.048827627613368334 0.12001410440402827 1.8967083768363637 0.014853428944573196 0.019993036989197025 2.2613678228620216e-06 5.64562879172494 0.19649218251731604 QAS(ph)VHDS(ph)GEEGEA ddPTM_KYSE-520_SHP099_60min_R1 2 QASVHDSGEEGEA 13 0 C9JUG3;Q8TE77-4;Q8TE77;Q8TE77-3 C9JUG3 SSH3 Protein phosphatase Slingshot homolog 3 2 QAS(1)VHDS(1)GEEGEA;QAS(1)VHDS(1)GEEGEA 102.29 0.0011807 724120000.0 816520.0 735840.0 720930.0 691090.0 720400.0 744440.0 729620.0 741690.0 917360.0 706210.0 True False 771226.0079077334 700489.1418816417 767402.3013287842 756770.9858162148 777091.3814846971 739793.6738240023 803377.1100049939 739117.2505017476 750790.5487636987 699953.5288230658 1.1018245871329608 1.0007652123127038 1.0963617865019266 1.081173184580817 1.1102042485468062 1.0569182715142897 1.1477577823713943 1.0559518883268344 1.07262913586008 1.0 19.41689961654865 -3.918097406407378 21.750337341765224 1.0740071022108864 2.783467290408485 0.03827247955336477 0.04331492140272062 5663.801084521296 1196361.2500284403 0.009994829212874631 97595.84460983657 0.00012075429690957549 3.918097406407378 1.7094601881975988 QASASERLPS(ph)VEEAEVPKPLPPASK ddPTM_KYSE-520_SHP099_60min_R1 2 QASASERLPSVEEAEVPKPLPPASK 25 2 E9PDI4;O00515;A0A0J9YYF6;A0A0J9YVY2;A0A0J9YW63 E9PDI4 LAD1 Ladinin-1 1 QASASERLPS(1)VEEAEVPKPLPPASK;QAS(0.328)AS(0.328)ERLPS(0.345)VEEAEVPKPLPPASK 172.92 1.2068000000000002e-10 1862770000.0 1015010.0 1004590.0 822200.0 689920.0 695460.0 1183980.0 1013110.0 1285600.0 1537650.0 1407640.0 True False 958705.3719277285 956327.9884796686 875200.327566514 755489.789367989 750188.7453738861 1176590.3416449185 1115525.0458007709 1281140.553661295 1258451.5210021187 1395169.40472735 0.6871605474426834 0.6854565368472644 0.6273075689597346 0.5415039828196563 0.5377044126913686 0.8433315249447094 0.7995624345122244 0.9182688133213909 0.9020062486591374 1.0 20.412008877415683 -6.381344706659067 4.493109114062466 0.8889902012079359 0.6168219682259138 0.8146926103740366 0.06621692641727699 0.11030566370989701 3.5644929585753546 0.026127717516953117 0.022810321370956007 4.1558062638968107e-07 6.381344706659067 -0.2721682329820221 QASASERLPS(ph)VEEAEVPKPLPPASKDEDEDIQSILR ddPTM_KYSE-520_SHP099_60min_R1 2 QASASERLPSVEEAEVPKPLPPASKDEDEDIQSILR 36 3 E9PDI4;O00515;A0A0J9YYF6;A0A0J9YVY2;A0A0J9YW63 E9PDI4 LAD1 Ladinin-1 1 QASASERLPS(1)VEEAEVPKPLPPASKDEDEDIQSILR;QAS(0.003)AS(0.056)ERLPS(0.941)VEEAEVPKPLPPASKDEDEDIQSILR 206.07 1.1809e-16 2271400000.0 406750.0 498720.0 512250.0 383570.0 352050.0 492930.0 393760.0 456640.0 836450.0 602770.0 True False 384186.7666639779 474760.7426060187 545270.4546289786 420024.37747547484 379754.3321095057 489853.441026901 433565.1035272686 455056.02242057683 684571.7651885799 597429.9267479641 0.6430658215520789 0.7946718457682896 0.9126935732816246 0.7030521215464139 0.6356466509413939 0.8199345548244589 0.7257170826498877 0.7616893664795434 1.1458611872943185 1.0 19.18840998207126 -7.752307550017039 24.884053957886962 1.0729305935181066 0.7527042491825131 0.7004624676853973 0.08456534760694571 87.6644809266788 238888.84499213824 0.05970601134417212 0.021848491174077528 1.768855881549618e-08 7.752307550017039 -0.3202263443355935 QASEGPLK ddPTM_KYSE-520_SHP099_60min_R1 7 QASEGPLK 8 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;;;;; 103.56 0.015941999999999998 3904380000.0 4486940.0 5769370.0 3853140.0 3166230.0 5194020.0 6034000.0 4270620.0 5148990.0 4954930.0 5212700.0 False True 4238040.493706863 5492200.805199081 4101519.569641975 3467147.5472382363 5602759.824068774 5996339.567801349 4702335.946834683 5131129.355473297 4055239.615620601 5166519.533419232 0.8202892617154404 1.063036879987234 0.7938651045663552 0.6710799262078195 1.0844360091600844 1.1606149031305293 0.9101554569605297 0.9931500930719381 0.7849074390195561 1.0 22.3007612941972 -5.7862711430007225 24.999998527740075 0.9931855811486276 0.8501223246211638 0.24486768865904274 0.12966234943102983 374.0582791296246 376590.4490968245 0.04249102344973989 0.048200544709855554 1.635794926983862e-06 5.7862711430007225 -0.14306325652746388 QASGT(ph)PQPALR ddPTM_KYSE-520_SHP099_60min_R1 1 QASGTPQPALR 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 QAS(0.012)GT(0.988)PQPALR 121.45 0.029816000000000002 0.0 646080.0 798120.0 636850.0 517460.0 654370.0 813730.0 619020.0 769100.0 1062100.0 813240.0 True False 610240.6544714503 759777.1171974557 677902.3699960269 566639.2428199784 705865.1961440045 808651.2092321827 681596.5826530128 766432.1716092896 869249.4133621748 806035.3262911465 0.7570892175152959 0.9426101963712421 0.841033076199396 0.702995544162172 0.8757248883767165 1.0032453700919943 0.8456162657153995 0.9508667258244313 1.0784259510831848 1.0 19.620483543895023 -6.935683570761358 0.78676940043685 1.0282448080758546 0.8251799723064127 0.4751600723101399 0.08039729533766572 0.6391388776619239 0.750740725223521 0.07237122486418351 0.03904498442475233 1.1596219550701867e-07 6.935683570761358 -0.2030648357694419 QAST(ph)DAGTAGALTPQHVR ddPTM_KYSE-520_SHP099_60min_R1 2 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937;P46937-7;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QAS(0.15)T(0.849)DAGTAGALTPQHVR;QAS(0.184)T(0.816)DAGTAGALTPQHVR 355.75 2.0840999999999993e-71 947450000.0 503955.0 428179.0 397987.0 341500.0 327601.0 334620.0 316037.0 356341.0 484086.0 351810.0 True False 475999.6115406146 407608.6381302182 423641.87882171496 373956.05732428137 353381.33490528626 332531.5124590132 347985.10418388725 355104.93624161487 396188.1852149911 348693.2371040385 1.3650956224269764 1.1689605497241156 1.214941483637993 1.0724499862115344 1.0134447626233973 0.9536505933431593 0.9979691808019209 1.0183877932099479 1.1362084005569104 1.0 18.41159885779123 -4.698116881578605 0.9024562874458113 1.0145400840858145 1.3981887575072376 0.7808607562731289 0.056553227465672026 0.582597823015006 0.5837515254326778 0.02195469669995797 0.19391164844961387 2.0039326368346163e-05 4.698116881578605 0.38364867342142306 QASTDAGTAGALT(ph)PQHVR ddPTM_KYSE-520_SHP099_60min_R1 2 QASTDAGTAGALTPQHVR 18 0 P46937-6;P46937;P46937-7;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QASTDAGTAGALT(1)PQHVR;QASTDAGTAGALT(1)PQHVR 134.56 1.2618e-05 422220000.0 201236.0 286986.0 230295.0 163774.0 199951.0 240378.0 184233.0 238651.0 273984.0 211376.0 True False 190073.0379259797 273198.76178523194 245140.1841850281 179339.0317195515 215686.0061344348 238877.7117383081 202857.06958080898 237823.17538256204 224235.41217458097 209503.37308803978 0.9072552633608679 1.3040303731550202 1.1701013715039932 0.8560197818112825 1.0295108997781954 1.1402093828719613 0.9682759116988641 1.1351758774911056 1.0703188634597798 1.0 17.676613946515197 QATENAKEEVRR ddPTM_KYSE-520_SHP099_60min_R1 2 QATENAKEEVRR 12 2 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 201.09 2.1176e-08 1774100000.0 956870.0 945810.0 775720.0 563150.0 856290.0 734610.0 505020.0 633870.0 906440.0 641960.0 False True 903790.5136269466 900371.867910246 825724.152395883 616671.6066827794 923675.1513763616 730025.0265002559 556072.3501202294 631671.2529163699 741853.3454929005 636272.7338373219 1.4204451417810118 1.4150722167208996 1.2977519049354689 0.9691938281932508 1.4516968938865782 1.1473460792473689 0.8739528201477237 0.9927680683514432 1.1659360931888885 1.0 19.279285773614813 -4.592151174652173 0.3852587380033901 0.9956289006076242 1.7080963037997283 0.47646528278931255 0.14599868007146638 4.236198325261992 0.6026422499724259 0.13703090186656944 1.3688465075855338 2.557695417338327e-05 4.592151174652173 0.7124674031921041 QATVSWDSGGSDEAPPKPS(ph)RPGYPSPR ddPTM_KYSE-520_SHP099_60min_R1 1 QATVSWDSGGSDEAPPKPSRPGYPSPR 27 2 E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397-7;Q05397;B4DWJ1;Q05397-6;Q05397-2;Q05397-5;E5RHK7;E5RJQ2;E5RG80 E9PEI4 PTK2 Focal adhesion kinase 1 1 QATVSWDSGGSDEAPPKPS(0.691)RPGYPS(0.309)PR 168.5 2.726e-10 5111200000.0 545040.0 542990.0 597420.0 535900.0 508960.0 571900.0 546700.0 648940.0 631800.0 554620.0 True False 514805.5446896977 516903.94535539375 635930.6491057969 586831.7748757903 549012.2564137313 568330.5599644671 601965.7712778287 646688.9786037343 517081.0463819056 549706.4982878307 0.9365098398748442 0.9403271508803207 1.1568548872653468 1.0675365430526902 0.998737068096772 1.03388001003198 1.095067591801752 1.176425930233633 0.9406493246713591 1.0 19.068302008555463 -4.701441222946481 14.515871492304026 1.0635341862048424 0.9383086711299299 0.32942944739250035 0.06832729902252728 1.8588074816314928 447.3143814534276 0.017121620324982614 0.04530043812907076 1.988651934681588e-05 4.701441222946481 -0.12522551507491253 QATVSWDSGGSDEAPPKPSRPGYPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 QATVSWDSGGSDEAPPKPSRPGYPSPR 27 2 E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397-7;Q05397;B4DWJ1;Q05397-6;Q05397-2;Q05397-5;E5RHK7;E5RJQ2;E5RG80 E9PEI4 PTK2 Focal adhesion kinase 1 1 QATVSWDS(0.001)GGS(0.003)DEAPPKPS(0.319)RPGY(0.088)PS(0.589)PR;QATVSWDSGGSDEAPPKPS(0.002)RPGYPS(0.998)PR;QATVSWDSGGSDEAPPKPS(0.467)RPGYPS(0.533)PR;QATVSWDSGGSDEAPPKPS(0.001)RPGYPS(0.999)PR;QATVSWDSGGSDEAPPKPS(0.003)RPGYPS(0.997)PR 265.68 4.3958e-41 15350330000.0 5944820.0 4943940.0 5253740.0 5343460.0 5237970.0 5045390.0 4718640.0 5365350.0 5887290.0 5353970.0 True False 5615048.983895132 4706425.701394768 5592404.486681213 5851300.831830167 5650168.439027486 5013899.849517611 5195646.180688522 5346738.853132103 4818306.542503534 5306537.991125627 1.0581379033346114 0.8869107710649665 1.053870620738729 1.1026588034638727 1.0647560515870287 0.9448532843640413 0.9791027953399081 1.0075757230182287 0.9079943553709432 1.0 22.339339516617734 -6.267450139421778 24.841462724248593 0.9690785621761437 1.030135702598255 0.23197337798621476 0.05930920500544496 817.7058773489309 3379424.628925497 0.02185784703240503 0.019763171159456566 5.401941299333903e-07 6.267450139421778 0.06105714042211119 QAVDVS(ph)PLRR ddPTM_KYSE-520_SHP099_60min_R1 1 QAVDVSPLRR 10 1 M0R0F0;M0R0R2;P46782;M0QZN2 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 1 QAVDVS(1)PLRR 73.92699999999999 0.011992000000000001 0.0 156870.0 168690.0 158810.0 143600.0 160140.0 152710.0 152640.0 147320.0 179660.0 157530.0 True False 148168.10838740796 160585.87919114795 169047.14670498428 157247.70082508554 172742.1069280394 151756.88024510175 168070.34082284232 146808.98130474662 147038.27286003978 156134.4067564856 0.9489779444866226 1.0285105155688397 1.0827027188737328 1.007130357054075 1.1063679717786734 0.9719630887110536 1.0764465329219366 0.9402730913354457 0.9417416437196154 1.0 17.252428968109022 -7.274523485699091 24.917174073460288 0.9557555186572104 1.033191232831428 0.3081187690107303 0.04859295852607169 856.525365479258 1631144.5744832903 0.025220532215043116 0.012236488240120552 5.3146725813846575e-08 7.274523485699091 0.07743571417421768 QAVEMKNDKS(ph)EEEQSSSSVK ddPTM_KYSE-520_SHP099_60min_R1 1 QAVEMKNDKSEEEQSSSSVK 20 2 P07910;P07910-3;G3V5V7;P07910-2;G3V2D6;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 QAVEMKNDKS(0.971)EEEQS(0.011)S(0.013)S(0.003)S(0.002)VK 49.528 0.057067999999999994 1052800000.0 494250.0 368520.0 411070.0 375670.0 424610.0 382250.0 397960.0 341890.0 449780.0 380270.0 True False 466832.96723705175 350815.74604020256 437568.22993525455 411373.5638506958 458024.39129958046 379864.23596156156 438189.68051531934 340704.0633877255 368111.29003110743 376901.1036455835 1.2386086501779923 0.9307899145078914 1.1609629839309756 1.0914628794441745 1.2152375964658377 1.0078618297673239 1.1626118264895509 0.9039614373432675 0.9766787267814915 1.0 18.523826493959323 -7.262011510916245 24.999079331587595 0.9552400579502868 1.1088047027416756 0.38231190880197485 0.0900359711621547 52.346640816572254 2287131.4521770496 0.04284646784265605 0.022548707897671282 5.4700146450232614e-08 7.262011510916245 0.15356464479138887 QAVKT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 QAVKTPPR 8 1 Q9H0E9-2;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;B5MCW3;Q9H0E9;H7C2P4 Q9H0E9-2 BRD8 Bromodomain-containing protein 8 1 QAVKT(1)PPR 74.533 0.048073000000000005 741610000.0 1648500.0 1702300.0 1365200.0 970960.0 1176300.0 1661500.0 1201300.0 1461500.0 1844300.0 1569900.0 True False 1557054.418796721 1620518.9527956082 1453202.976397233 1063239.7464702302 1268868.1177685321 1651129.9621978668 1322739.12755818 1456430.397616663 1509421.611019545 1555991.9073637195 1.0006828515161121 1.0414700392248282 0.933939932155149 0.683319586328474 0.8154721832187067 1.0611430267624833 0.8500938348704304 0.9360141211044335 0.9700703479730319 1.0 20.56940312628286 -8.949330700530798 14.546269465899634 1.000003857404835 0.9175903086213367 0.04475422381969696 0.10774298104950662 0.0 0.0 0.11199710731193524 0.027163288424161477 1.1237489513468176e-09 8.949330700530798 -0.08241354878349838 QAVKT(ph)PPRR ddPTM_KYSE-520_SHP099_60min_R1 1 QAVKTPPRR 9 2 Q9H0E9-2;H7C179;H7C127;Q9H0E9-3;Q9H0E9-4;B5MCW3;Q9H0E9;H7C2P4 Q9H0E9-2 BRD8 Bromodomain-containing protein 8 1 QAVKT(1)PPRR 105.03 0.001332 858630000.0 909950.0 800390.0 753580.0 691360.0 701580.0 774510.0 696150.0 726650.0 899560.0 723230.0 True False 859473.2595596464 761938.0629901172 802156.9725706314 757066.6465350367 756790.3545558491 769675.9958001034 766523.6357692708 724129.4207513845 736222.5800622149 716822.7448644249 1.1990038900372804 1.062937899848902 1.1190450893440136 1.056142054585926 1.055756614836466 1.0737326644757552 1.0693349803154557 1.0101931418043124 1.0270636434694314 1.0 19.4512568894307 -1.0000000000000002 0.28494425462231077 1.0175753577116389 2.1642864550949485 0.7169942885914251 0.0290187771399712 29.737420303370932 0.42081005611172523 0.031048950868758148 17.081009754242793 0.09999999999999995 1.0000000000000002 1.1467110973833097 QAVRVS(ph)PCHSR ddPTM_KYSE-520_SHP099_60min_R1 2 QAVRVSPCHSR 11 1 A0A1B0GWK2;Q674X7-4;Q674X7-3;Q674X7-2;Q674X7;Q674X7-5 A0A1B0GWK2 KAZN Kazrin 1 QAVRVS(0.637)PCHS(0.363)R;QAVRVS(0.786)PCHS(0.214)R 104.95 0.00061531 438320000.0 360810.0 357500.0 366390.0 271780.0 280920.0 255190.0 207147.0 240790.0 407120.0 243297.0 True False 340795.15004309686 340325.1633815597 390008.0856447277 297609.8894863635 303026.8057838437 253597.26455207617 228087.4403198983 239954.75569080823 333197.2706600212 241141.5778622015 1.4132575272350654 1.4113085200762678 1.6173406888280164 1.2341707810190676 1.2566344156419431 1.0516530031871667 0.9458652561784145 0.9950783179660894 1.3817495664328125 1.0 17.87952089768769 -5.724222818527642 1.7109889184801366 1.0722599629542988 1.4689286672774662 0.6108338099661185 0.13392306480518598 0.24022661864509276 1.4537077611397422 0.04772196163580667 0.06565188334370778 1.887022947304478e-06 5.724222818527642 0.39666870432316736 QAVRVSPCHS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 QAVRVSPCHSR 11 1 A0A1B0GWK2;Q674X7-4;Q674X7-3;Q674X7-2;Q674X7;Q674X7-5 A0A1B0GWK2 KAZN Kazrin 1 QAVRVS(0.328)PCHS(0.672)R;QAVRVS(0.216)PCHS(0.784)R 90.444 0.0019239 1015840000.0 432160.0 467770.0 538970.0 308360.0 376430.0 287500.0 295060.0 271710.0 518920.0 267550.0 True False 408187.2233103986 445297.62706291553 573712.8685824911 337666.4416881858 406052.89940628107 285705.60585728986 324887.5443080965 270767.5014275906 424697.20890867175 265179.7151507501 1.5392852469064278 1.6792296002345861 2.1634870082590787 1.273349439629001 1.5312366527562147 1.0774036984498272 1.2251598661059104 1.0210716957504231 1.6015448567294774 1.0 18.01661089554835 -5.362494258980374 8.918298260647466 1.250206732922717 1.7818451587843394 0.5271085445686625 0.23733525163385502 0.27053115736607186 21.837929099315144 0.06596156436422648 0.09791517040888541 4.34016000945157e-06 5.362494258980374 0.5316384258616225 QAYS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 QAYSPR 6 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 QAYS(1)PR;QAY(0.001)S(0.999)PR;QAY(0.001)S(0.999)PR;QAYS(1)PR;QAY(0.002)S(0.998)PR 72.643 0.037131 34026600000.0 4590310.0 3800030.0 4147670.0 3707360.0 4235660.0 3865740.0 3932280.0 3680910.0 4587430.0 3823910.0 True False 4335676.353743878 3617470.854838679 4415035.44470664 4059706.3797415765 4568982.344391274 3841612.482736556 4329793.237754495 3668141.782340855 3754468.351699506 3790033.132356963 1.1439679291266744 0.9544694540939356 1.1649068202105657 1.071153269105304 1.2055256998637094 1.0136092083046029 1.1424156693484797 0.9678389750803298 0.990616234894142 1.0 21.853779029772824 -7.271051443747979 24.685759686294798 0.9844206924225456 1.096069561867227 0.3532071859227395 0.07013459125124791 645.3163648564927 1657293.5194888508 0.035782498368043654 0.01755522802989888 5.357331942253227e-08 7.271051443747979 0.11164886944468133 QAYVDKLEELMK ddPTM_KYSE-520_SHP099_60min_R1 2 QAYVDKLEELMK 12 1 Q92598-2;Q92598-3;Q92598;Q92598-4;A0A0A0MSM0 Q92598-2 HSPH1 Heat shock protein 105 kDa 0 ; 141.46 3.6916e-05 814720000.0 1014060.0 971270.0 649170.0 603850.0 942130.0 934710.0 722440.0 836750.0 827840.0 756470.0 False True 957808.0703215073 924608.7312940066 691016.5369087249 661239.7224458781 1016270.2710135721 928876.1281769293 795471.2855349454 833847.5095489186 677525.1241481431 749768.264324754 1.2774721415877948 1.2331926747082513 0.9216401517488323 0.8819254613842514 1.3554458348925071 1.2388842958210307 1.0609561959138827 1.1121403095126823 0.9036460415650247 1.0 19.51608523595204 -7.693176916462745 6.188044357268011 0.9528510144233043 1.1323316386217581 0.2046365314015135 0.144727494382808 0.335321416885541 22.435611679288236 0.11114928969641305 0.03994908056639074 2.026856880345287e-08 7.693176916462745 0.1794806241984538 QCEGIT(ph)SPEGSK ddPTM_KYSE-520_SHP099_60min_R1 2 QCEGITSPEGSK 12 0 Q9Y570;Q9Y570-4;Q9Y570-2 Q9Y570 PPME1 Protein phosphatase methylesterase 1 1 QCEGIT(0.5)S(0.5)PEGSK;QCEGIT(0.655)S(0.345)PEGSK 112.08 0.0061109 1100230000.0 2599200.0 2593100.0 2331800.0 2090860.0 2294600.0 2744800.0 2504200.0 2709000.0 3021400.0 2783800.0 True False 2455017.1946232608 2468523.5836775447 2482111.559011916 2289574.7057600166 2475171.965511919 2727668.6850681356 2757348.974636806 2699603.1112853554 2472789.923295805 2759137.6977636297 0.889776975108249 0.8946721237140005 0.8995968418045057 0.829815310637012 0.8970817105351886 0.9885946204421038 0.9993517093662004 0.9784227563102309 0.8962183820329378 1.0 21.39578602707501 -6.1767339585240775 5.018256313811291 0.9727051156667792 0.8794945390836725 0.6534028082072112 0.03302625543816334 0.14558183655443346 6.295996601639636 0.011359306242735834 0.011327125268891193 6.656808161685105e-07 6.1767339585240775 -0.09321057658310672 QCEGITS(ph)PEGSK ddPTM_KYSE-520_SHP099_60min_R1 1 QCEGITSPEGSK 12 0 Q9Y570;Q9Y570-4;Q9Y570-2 Q9Y570 PPME1 Protein phosphatase methylesterase 1 1 QCEGIT(0.463)S(0.537)PEGSK 93.301 0.0023448 495480000.0 616680.0 535800.0 489810.0 487650.0 494980.0 659110.0 520980.0 620900.0 672590.0 593660.0 True False 582471.5310788976 510059.3637478032 521383.9363237094 533996.1093826812 533932.1099490502 654996.2500055588 573645.7426748194 618746.2428191494 550464.6106141283 588400.6342604917 0.9899233569164217 0.8668572636548079 0.886103627299774 0.9075382966808208 0.907429528216097 1.1131807341247435 0.9749237326975074 1.0515730384906814 0.9355268817919583 1.0 19.16643927616887 -6.205569815617153 22.833090233632205 1.015756856931259 0.9074472799290095 0.48762270669015506 0.052945345669513734 92.33092458504474 37733.997305240766 0.016594612885014157 0.016594591130303312 6.229170014854984e-07 6.205569815617153 -0.10830957700224941 QDAKDPTSLLGVLQAEADS(ph)TSEGLEDAVHSR ddPTM_KYSE-520_SHP099_60min_R1 7 QDAKDPTSLLGVLQAEADSTSEGLEDAVHSR 31 1 A0A0A0MQU1;Q27J81-2;Q27J81 A0A0A0MQU1 INF2 Inverted formin-2 1 QDAKDPTSLLGVLQAEADS(0.987)T(0.012)S(0.001)EGLEDAVHSR;QDAKDPTSLLGVLQAEADS(0.991)T(0.008)SEGLEDAVHSR;QDAKDPTSLLGVLQAEADS(0.974)T(0.025)S(0.001)EGLEDAVHSR;QDAKDPTSLLGVLQAEADS(0.985)T(0.014)SEGLEDAVHSR;QDAKDPTSLLGVLQAEADS(0.333)T(0.333)S(0.333)EGLEDAVHS(0.001)R;QDAKDPTSLLGVLQAEADS(0.826)T(0.173)S(0.001)EGLEDAVHSR;QDAKDPTSLLGVLQAEADS(0.975)T(0.025)SEGLEDAVHSR 303.18 1.1645e-53 1296159000.0 1062103.0 1142739.0 1107243.0 924528.0 854282.0 873077.0 654420.0 690603.0 1350706.0 745739.0 True False 1003186.029340161 1087840.1031537927 1178617.6554314387 1012394.8631505203 921509.1332003198 867627.8025915314 720575.1601237189 688207.4593809526 1105451.8389273805 739132.3326361631 1.3572482017695442 1.4717798899067787 1.5945962629287544 1.3697071802281315 1.2467444495543825 1.1738463659099865 0.9748933016551192 0.9311018189752522 1.495607471242281 1.0 19.495473158898037 -5.893415955512508 1.813260554186263 1.1000088990598291 1.4741232042955963 0.5066540006907375 0.15681354496026528 0.2800908943621785 1.8886720192912778 0.0573106226553187 0.06834154365265484 1.2781565339552572e-06 5.893415955512508 0.37411430523576716 QDAKDPTSLLGVLQAEADST(ph)S(ph)EGLEDAVHSR ddPTM_KYSE-520_SHP099_60min_R1 1 QDAKDPTSLLGVLQAEADSTSEGLEDAVHSR 31 1 A0A0A0MQU1;Q27J81-2;Q27J81 A0A0A0MQU1 INF2 Inverted formin-2 2 QDAKDPTSLLGVLQAEADS(0.417)T(0.589)S(0.995)EGLEDAVHSR 130.01 0.00092012 107900000.0 144760.0 165770.0 147840.0 120730.0 140720.0 128550.0 99052.0 107640.0 197810.0 112490.0 True False 136729.8742280942 157806.1603741572 157370.00295236375 132204.14290120188 151793.86341272425 127747.67176679856 109065.14281436184 107266.62196336492 161892.69038430657 111493.4261158958 1.2263492027410252 1.4153853359041992 1.4114733795047245 1.1857572908718186 1.3614602107117664 1.145786583273589 0.9782203903303699 0.962089207410873 1.4520379902580218 1.0 16.766599122792325 -6.369189641842154 4.525626357940981 1.0912816938118177 1.3226773377571812 0.34633437570687875 0.14651598247210135 0.26041266554765435 8.712636582533007 0.052598834051684855 0.046042598216958594 4.273762245290481e-07 6.369189641842154 0.2313956439453635 QDAKDPTSLLGVLQAEADST(ph)SEGLEDAVHSR ddPTM_KYSE-520_SHP099_60min_R1 2 QDAKDPTSLLGVLQAEADSTSEGLEDAVHSR 31 1 A0A0A0MQU1;Q27J81-2;Q27J81 A0A0A0MQU1 INF2 Inverted formin-2 1 QDAKDPTSLLGVLQAEADS(0.056)T(0.472)S(0.472)EGLEDAVHSR;QDAKDPTSLLGVLQAEADS(0.017)T(0.55)S(0.434)EGLEDAVHSR 136.15 4.5659e-06 155395000.0 84928.0 85998.0 83332.0 69642.0 72918.0 60772.0 55304.0 52154.6 111208.0 57422.1 True False 80216.8745402293 81866.52699437038 88703.71405591427 76260.7547413692 78656.23175333314 60392.6994057712 60894.66803502664 51973.68786557514 91015.43052554442 56913.38486771777 1.4094553456392587 1.4384406617995138 1.5585738620552247 1.3399441083783716 1.382033979109689 1.0611335021830157 1.0699533717167318 0.9132067612280691 1.599192013216032 1.0 15.796480364443504 -6.147625895892875 3.8015794255126076 1.1197784542442393 1.438120301796388 0.40924616224765165 0.1786463741635428 0.23951529983685102 6.171531689813394 0.059664589461167705 0.05972418665011481 7.118264215690796e-07 6.147625895892875 0.31834184755214867 QDDDLEVPAYEDIFRDEEEDEEHS(ph)GNDS(ph)DGS(ph)EPSEK ddPTM_KYSE-520_SHP099_60min_R1 1 QDDDLEVPAYEDIFRDEEEDEEHSGNDSDGSEPSEK 36 1 H7BZ91;A0A5F9ZH29;O75419-2;O75419;O75419-3 H7BZ91 CDC45 Cell division control protein 45 homolog 3 QDDDLEVPAYEDIFRDEEEDEEHS(1)GNDS(1)DGS(1)EPSEK 154.2 4.4184e-07 123050000.0 125490.0 124820.0 113610.0 103770.0 116310.0 123750.0 122950.0 118130.0 146950.0 134840.0 True False 118528.81954188687 118823.45984136044 120933.48238242722 113632.26960041175 125462.93528662584 122977.63034726826 135378.98587636565 117720.23460174924 120267.58430804213 133645.42250393267 0.8868902302912696 0.8890948722008337 0.9048830862790577 0.8502518640102917 0.9387746541258003 0.9201783947643213 1.0129713636273774 0.8808400048141206 0.8999005132742435 1.0 17.028050899043837 -5.788727623778048 24.08902916435615 0.9385992712879894 0.8848098755074727 0.3418061275415031 0.04011760764786238 185.31709927914045 163589.64467034096 0.012459988625896116 0.014132510031304947 1.6265685699991207e-06 5.788727623778048 -0.05378939578051667 QDDS(ph)PPRPIIGPALPPGFIK ddPTM_KYSE-520_SHP099_60min_R1 7 QDDSPPRPIIGPALPPGFIK 20 1 A0A0A0MRI1;Q8IXQ4-4;Q8IXQ4 A0A0A0MRI1 GPALPP1 GPALPP motifs-containing protein 1 1 QDDS(1)PPRPIIGPALPPGFIK;QDDS(1)PPRPIIGPALPPGFIK;QDDS(1)PPRPIIGPALPPGFIK;QDDS(1)PPRPIIGPALPPGFIK;QDDS(1)PPRPIIGPALPPGFIK;QDDS(1)PPRPIIGPALPPGFIK;QDDS(1)PPRPIIGPALPPGFIK 211.92 7.3288e-19 4985940000.0 3759430.0 3690730.0 3531490.0 2712000.0 3065480.0 3699420.0 3268160.0 3472050.0 4279030.0 3569150.0 True False 3550886.923662095 3513421.790901329 3759135.4959837864 2969747.664607468 3306715.8358047022 3676330.547549829 3598537.5069679017 3460006.2689325586 3502066.0175681626 3537530.107756682 1.0037757462123433 0.9931849861001913 1.0626440995487767 0.8394974951861901 0.9347527045929934 1.0392365394965264 1.0172457611250996 0.9780853204177292 0.9899749008182974 1.0 21.754310996032345 -6.258505475668988 24.996380214070122 1.0043099147609447 0.9664939832813909 0.1055908946721843 0.05548135286135191 706.5072562931991 6019348.214492395 0.020122145165844037 0.019232374381623406 5.514352497354243e-07 6.258505475668988 -0.037815931479553755 QDEFKR ddPTM_KYSE-520_SHP099_60min_R1 1 QDEFKR 6 1 P30040;F8W1G0 P30040 ERP29 Endoplasmic reticulum resident protein 29 0 137.77 0.016975999999999998 806520000.0 1769700.0 1734700.0 1226500.0 1112600.0 1961800.0 1948800.0 1351400.0 1847400.0 1887000.0 1736600.0 False True 1671531.2131905144 1651362.4081622155 1305562.1524693845 1218341.1694846125 2116182.498884896 1936636.816329343 1488012.7003930088 1840991.8005864022 1544368.367398949 1721215.0750543545 0.9711344255671993 0.9594166540227792 0.7585119206721774 0.7078378449864194 1.229470116521068 1.1251567827850832 0.8645129373771134 1.0695884711143755 0.897254729976252 1.0 20.714995950448643 -5.750312328275958 24.999999568531322 1.0308603869985518 0.8506165528019811 0.3434965280747637 0.12310280172549679 276.1236823765542 620385.3943501055 0.03867158061697821 0.0494460520069393 1.7770009980410581e-06 5.750312328275958 -0.18024383419657064 QDEHGYISR ddPTM_KYSE-520_SHP099_60min_R1 9 QDEHGYISR 9 0 P04792 P04792 HSPB1 Heat shock protein beta-1 0 ;;;;;;;; 143.79 0.00062156 6139363000.0 6006860.0 5661150.0 3911468.0 3736499.0 5462120.0 5138595.0 4087561.0 4676452.0 5160934.0 4538054.0 False True 5673647.5014214665 5389179.856440611 4163607.4858500743 4091614.7415406117 5891957.76878844 5106523.122539973 4500771.556631012 4660230.479504098 4223838.482158837 4497850.372112582 1.2614131267236057 1.1981678825632838 0.925688304721102 0.9096822710931651 1.3099497051568354 1.135325255415623 1.0006494623601847 1.036101713920565 0.9390793674123389 1.0 22.10080423777612 -4.598882507217552 6.8149170488171915 1.0417998907815151 1.2460986309360294 0.3351157331605653 0.1122210599316022 0.23708365940447354 16.89369145016783 0.030676305882427406 0.08291781848164083 2.5183581449907678e-05 4.598882507217552 0.2042987401545142 QDELKR ddPTM_KYSE-520_SHP099_60min_R1 4 QDELKR 6 1 Q86VP6-2;Q86VP6;A0A0C4DGH5;O75155-2;O75155;P56385 Q86VP6-2 CAND1;CAND2;ATP5I Cullin-associated NEDD8-dissociated protein 1;Cullin-associated NEDD8-dissociated protein 2;ATP synthase subunit e, mitochondrial 0 ;;; 105.95 0.025025 2202240000.0 4477960.0 4385730.0 2595100.0 2584070.0 4838300.0 4853590.0 3307420.0 3879480.0 4108880.0 4166490.0 False True 4229558.632208053 4175032.9476850554 2762384.2983068065 2829659.2358710216 5219046.683838715 4823296.94446221 3641766.290908575 3866022.989357439 3362810.9684357136 4129578.1400801656 1.0242108246257684 1.011007131010241 0.6689265112811696 0.6852175064584419 1.2638207843035028 1.1679878139728281 0.881873684762841 0.936178674483779 0.8143231231775245 1.0 21.977562978983425 -4.559580757151781 24.999606249462452 0.9289999392300741 1.0209132440529467 0.03972700240989391 0.17797846442782495 623.490315523778 424688.8050242528 0.04974656931799644 0.13161791116751728 2.7568887606256904e-05 4.559580757151781 0.09191330482287263 QDGGQNES(ph)FKR ddPTM_KYSE-520_SHP099_60min_R1 3 QDGGQNESFKR 11 1 A0A0C4DG89;Q7L014 A0A0C4DG89 DDX46 Probable ATP-dependent RNA helicase DDX46 1 QDGGQNES(1)FKR;QDGGQNES(1)FKR;QDGGQNES(1)FKR 130.02 9.8748e-05 2041040000.0 2276550.0 2082330.0 2126110.0 2155650.0 2114960.0 2232030.0 2324630.0 2232470.0 2462520.0 2097330.0 True False 2150265.233310086 1982291.74115895 2263162.4524962786 2360522.3278801925 2281395.319523701 2218099.0728405113 2559626.2866024883 2224726.0826324155 2015388.4430775126 2078749.2878980504 1.0344033529336045 0.953598277916124 1.088713519072182 1.1355493140142263 1.0974845946095588 1.0670353975603117 1.2313299643703939 1.0702233769046632 0.9695197274681422 1.0 20.987284338623308 -4.779025484608943 23.74562217387323 1.0921854129800046 0.9940008590827615 0.19306545233944394 0.07014725747977957 166.40720377750407 224692.26495605192 0.01847754455849089 0.03863043272316068 1.663315043380162e-05 4.779025484608943 -0.09818455389724312 QDIAFAYQR ddPTM_KYSE-520_SHP099_60min_R1 4 QDIAFAYQR 9 0 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4;H0YKL9;H0YKV8 P07355 ANXA2 Annexin A2;Annexin 0 ;;; 186.54 4.5055e-05 6897570000.0 3867450.0 4969490.0 2677330.0 2403850.0 4144270.0 4646590.0 3352750.0 3756470.0 3614460.0 4076050.0 False True 3652914.8389295647 4730748.241043441 2849914.9756794614 2632311.181256142 4470400.471329238 4617588.908244953 3691678.6896867435 3743439.6823366918 2958165.177121783 4039939.3681189106 0.9042004114607409 1.1709948615506542 0.7054350860236914 0.6515719522993255 1.1065513771338504 1.1429847053360627 0.9137955680274664 0.9266078872069122 0.7322300924776437 1.0 21.94590221032833 -11.035536948662964 2.865944603273434 1.0973851066610258 0.9229722724040473 0.019109568306939106 0.17361881118519432 29184901.470944185 39741788.501697645 19072460.624148287 0.04417364939980686 9.214314923671143e-12 11.035536948662964 -0.1744128342569785 QDKPMDT(ph)SVLS(ph)EEGGEPFQK ddPTM_KYSE-520_SHP099_60min_R1 1 QDKPMDTSVLSEEGGEPFQK 20 1 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 QDKPMDT(0.532)S(0.468)VLS(1)EEGGEPFQK 98.0 0.00087165 429200000.0 419090.0 397350.0 379380.0 410800.0 378630.0 408890.0 444560.0 442690.0 498720.0 441310.0 True False 395842.242264797 378260.7095654909 403835.44182946184 449842.30848847586 408426.0268899929 406337.9658399557 489500.4632874914 441154.41171462246 408165.0197081108 437400.33673398505 0.9049884259817967 0.8647929089170746 0.9232627593404519 1.0284452724645652 0.933757916008159 0.9289841175569999 1.1191131377322012 1.0085826979665096 0.9331611922291354 1.0 18.73859480548643 -5.063723074611772 4.5583990488025075 0.9932879967594255 0.8860444426618116 0.4043090037234496 0.05434002630399059 0.21451518912011658 8.826619408194421 0.015595422930817523 0.02904263251458381 8.635289965703937e-06 5.063723074611772 -0.10724355409761388 QDKPMDTS(ph)VLS(ph)EEGGEPFQK ddPTM_KYSE-520_SHP099_60min_R1 3 QDKPMDTSVLSEEGGEPFQK 20 1 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 QDKPMDT(0.11)S(0.89)VLS(1)EEGGEPFQK;QDKPMDT(0.151)S(0.849)VLS(1)EEGGEPFQK;QDKPMDT(0.047)S(0.953)VLS(1)EEGGEPFQK 108.44 0.00012639 879050000.0 1212940.0 1021380.0 1000900.0 1116640.0 1027180.0 1053570.0 1132500.0 1226290.0 1311040.0 1152740.0 True False 1145655.800264055 972311.3716773641 1065419.6154966229 1222765.1298699412 1108013.2221452685 1046994.2788280521 1246984.1521348855 1222036.2862082368 1072988.1846288925 1142527.6204181488 1.0027379468032127 0.8510178260036392 0.9325110364567768 1.070228069779553 0.9697911913409598 0.9163842169915044 1.0914258262557426 1.0695901476421104 0.9391354444772145 1.0 20.123797611945488 -5.101155716285999 7.723995851406047 1.0088479695121113 0.9183223144652378 0.24201546619572833 0.06399497739487278 0.36084159529363735 24.339496199061532 0.017517205462767967 0.03054835239461796 7.922172300644633e-06 5.101155716285999 -0.09052565504687349 QDKPMDTSVLS(ph)EEGGEPFQK ddPTM_KYSE-520_SHP099_60min_R1 9 QDKPMDTSVLSEEGGEPFQK 20 1 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 QDKPMDT(0.003)S(0.003)VLS(0.995)EEGGEPFQK;QDKPMDT(0.001)S(0.001)VLS(0.998)EEGGEPFQK;QDKPMDTSVLS(1)EEGGEPFQK;QDKPMDTSVLS(1)EEGGEPFQK;QDKPMDTSVLS(1)EEGGEPFQK;QDKPMDTSVLS(1)EEGGEPFQK;QDKPMDTSVLS(1)EEGGEPFQK;QDKPMDTSVLS(1)EEGGEPFQK;QDKPMDTSVLS(1)EEGGEPFQK 244.21 1.4780000000000003e-26 13387540000.0 10690580.0 9639580.0 8646850.0 8985420.0 9724890.0 9750970.0 9573480.0 9886860.0 11265030.0 9455920.0 True False 10097552.216257134 9176480.107495423 9204239.786449159 9839391.615234967 10490183.515944922 9690110.579291329 10541260.786560962 9852564.790270463 9219584.520296877 9372147.905394446 1.0774000067204614 0.9791224167742381 0.9820843502855261 1.0498544959551463 1.1192934236459238 1.0339263397362592 1.1247433238322664 1.0512600622317854 0.9837216199917463 1.0 23.159948291418452 -3.923090171803353 20.6276918854729 1.040873598232667 2.4875464457335723 0.04929573682406341 0.05062310086725642 2210.8963082159403 586770.2982253603 0.012934011289765488 1550.0339615282394 0.0001193740224537701 3.923090171803353 1.4466728475009054 QDKPMDTSVLS(ph)EEGGEPFQKK ddPTM_KYSE-520_SHP099_60min_R1 2 QDKPMDTSVLSEEGGEPFQKK 21 2 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 QDKPMDTSVLS(1)EEGGEPFQKK;QDKPMDTSVLS(1)EEGGEPFQKK 210.22 4.5037e-19 3427600000.0 2600900.0 2625400.0 2410800.0 2175610.0 2340000.0 2266400.0 1953160.0 2019300.0 3061500.0 2297800.0 True False 2456622.892234394 2499271.8431942617 2566204.025416386 2382379.320279001 2524144.6872212538 2252254.5569216064 2150604.4738046564 2012295.5196081626 2505608.7741345437 2277443.2796613504 1.0786757739141968 1.0974024536698435 1.126791630041374 1.0460762476742138 1.108323842689328 0.9889399121529431 0.9443064918501265 0.8835765692076359 1.100184929526377 1.0 21.118983693090126 -6.3246474787062334 5.032524568114479 0.972051738982231 1.0912614772683191 0.4911528580376726 0.0545211426270928 0.17321401829127447 8.910235176488984 0.019010152319752775 0.0168374890881015 4.7353547661609036e-07 6.3246474787062334 0.11920973828608816 QDLPALEEKPR ddPTM_KYSE-520_SHP099_60min_R1 1 QDLPALEEKPR 11 1 P34932;A0A087WYC1;A0A087WTS8 P34932 HSPA4 Heat shock 70 kDa protein 4 0 131.69 0.00015172 651620000.0 480240.0 452580.0 338830.0 280640.0 401910.0 457550.0 318430.0 379360.0 419510.0 408940.0 False True 453600.1298652942 430837.37746357045 360671.5239471686 307311.941222507 433538.03044491226 454694.2607304457 350620.01197731687 378044.0887032896 343337.55898650386 405317.1097505061 1.1191240610210331 1.0629637069325135 0.8898502315117681 0.7582012548438273 1.0696267688077061 1.121823505083054 0.8650511008359401 0.9327118930064303 0.8470838035873839 1.0 18.62869155194641 -4.626328501126743 4.919941600935151 0.9361330124784772 1.1059946363948818 0.2777862547346315 0.10178102558134733 0.2684603498812874 10.283743065510688 0.027939524950361252 0.07925834471270797 2.3641307882262937e-05 4.626328501126743 0.16986162391640458 QDLPSLDEKPR ddPTM_KYSE-520_SHP099_60min_R1 2 QDLPSLDEKPR 11 1 Q92598-2;Q92598-3;Q92598;Q92598-4 Q92598-2 HSPH1 Heat shock protein 105 kDa 0 ; 108.59 0.00048041 772510000.0 973090.0 837690.0 616900.0 565340.0 813440.0 800720.0 606060.0 726620.0 723220.0 620300.0 False True 919110.757893178 797446.1150016757 656666.3610748996 619069.7436243306 877453.1001595112 795722.4094679977 667326.4593756007 724099.5248143831 591901.4788925638 614804.6245860981 1.4949639627580005 1.2970724082281202 1.068089495125356 1.0069373567921742 1.4272064084590037 1.294268744324586 1.085428496613638 1.1777717600967381 0.9627472781146478 1.0 19.229768491518744 -1.0000000000000002 0.1489973554828228 0.9730190376891686 2.3871416687834284 0.36029359162896857 0.14264514219503024 96.27127355786118 0.9438480937346241 0.565701026775963 29.385905600869815 0.09999999999999995 1.0000000000000002 1.4141226310942598 QDPVTYIS(ph)ET(ph)DEEDDFMCKK ddPTM_KYSE-520_SHP099_60min_R1 3 QDPVTYISETDEEDDFMCKK 20 1 P35251-2;P35251;D6RAD2 P35251-2 RFC1 Replication factor C subunit 1 2 QDPVT(0.003)Y(0.072)IS(0.942)ET(0.982)DEEDDFMCKK;QDPVT(0.113)Y(0.127)IS(0.8)ET(0.96)DEEDDFMCKK;QDPVTYIS(1)ET(1)DEEDDFMCKK 203.99 1.4262e-13 880090000.0 1032450.0 1260060.0 1037600.0 988940.0 874060.0 945380.0 951200.0 994390.0 1148410.0 1153690.0 True False 975177.9403619502 1199524.8262113798 1104485.356218698 1082928.5602643462 942843.5492788941 939479.532749095 1047356.5788173984 990940.6931823707 939887.6930602167 1143469.2041572393 0.8528239648401171 1.0490224151646084 0.9659073914742871 0.9470552913250403 0.8245465167326387 0.8216045778351425 0.9159464680024523 0.8666089909371147 0.8219615269419814 1.0 20.124986081022247 -5.6386840186627145 6.250224132983782 0.8680752402958437 0.9636941909530107 0.2398232533265099 0.0674572597938362 0.2561107587569264 13.027466358145213 0.019193928755673988 0.024831728560009276 2.297819873874462e-06 5.6386840186627145 0.09561895065716697 QDPVTYIS(ph)ETDEEDDFMCKK ddPTM_KYSE-520_SHP099_60min_R1 1 QDPVTYISETDEEDDFMCKK 20 1 P35251-2;P35251;D6RAD2 P35251-2 RFC1 Replication factor C subunit 1 1 QDPVT(0.167)Y(0.033)IS(0.526)ET(0.273)DEEDDFMCKK 50.945 0.049032 451590000.0 188040.0 179000.0 160420.0 130460.0 149280.0 152900.0 149170.0 137360.0 186940.0 160180.0 True False 177609.04635155323 170400.5713155223 170760.9298810752 142858.87917577062 161027.48671298672 151945.6943846247 164249.55935890565 136883.530220065 152996.40837390546 158760.9298181541 1.11872011933281 1.073315528642345 1.0755853475830985 0.8998364984344838 1.0142765408178747 0.9570723386330904 1.0345716641181069 0.8621990963195565 0.9636905537725726 1.0 17.276496391371396 -5.154555328960136 6.269796108543662 0.9611697678808496 1.0903416433199606 0.5835348763476598 0.049470654375729686 0.1665707527914718 8.381162339626117 0.013219452598754101 0.023189513013825623 7.005589262257274e-06 5.154555328960136 0.12917187543911102 QDPVTYISET(ph)DEEDDFMCKK ddPTM_KYSE-520_SHP099_60min_R1 1 QDPVTYISETDEEDDFMCKK 20 1 P35251-2;P35251;D6RAD2 P35251-2 RFC1 Replication factor C subunit 1 1 QDPVT(0.054)Y(0.001)IS(0.391)ET(0.554)DEEDDFMCKK 68.375 0.010815 0.0 52501.0 52679.0 46338.0 39438.0 45167.0 47071.0 49803.0 43102.0 57979.0 45168.0 True False 49588.6648718512 50148.22176720895 49325.0216234214 43186.175662532914 48721.385934924096 46777.212428899125 54837.573270440334 42952.48922208245 47451.47513165007 44767.84666017224 1.107684835687391 1.1201839156544324 1.1017957150774342 0.9646694867938229 1.0883120268160926 1.0448841281998609 1.2249321189537274 0.9594495251945002 1.0599454445921637 1.0 15.450175305621956 -7.299308513670956 0.010853125476402221 6.864482587192532e-07 2.113288649059457 0.12094207378991428 0.07150088958937198 1974.5523583736547 21.135413086999694 2049.1719619558226 2062.382864115303 5.0198586262681334e-08 7.299308513670956 2.1132879626111984 QDPVVHLS(ph)PNK ddPTM_KYSE-520_SHP099_60min_R1 11 QDPVVHLSPNK 11 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 QDPVVHLS(1)PNK;QDPVVHLS(1)PNK;QDPVVHLS(1)PNK;QDPVVHLS(1)PNK;QDPVVHLS(1)PNK;QDPVVHLS(1)PNK;QDPVVHLS(1)PNK;QDPVVHLS(1)PNK;QDPVVHLS(1)PNK;QDPVVHLS(1)PNK;QDPVVHLS(1)PNK 155.57 2.3183e-05 8842800000.0 11360240.0 9829350.0 9339230.0 8210390.0 9458370.0 9565450.0 8874070.0 10169120.0 11162170.0 9159560.0 True False 10730064.841123017 9357133.271844868 9941251.709096331 8990702.99705623 10202689.908236291 9505748.478426488 9771147.59817716 10133845.696210457 9135401.303407285 9078413.424429843 1.1819317252339059 1.0307013829822944 1.0950428499262443 0.9903385731324391 1.1238406350586592 1.0470715568919449 1.0763056429973965 1.1162573483314238 1.0062772949758036 1.0 23.11400875839241 -8.488324613229663 0.009784256824323928 3.035268617656141e-07 2.086249809181825 0.2178383814613356 0.05269927145059426 4429.57329633351 18.557429759720115 2024.7152173375332 1930.2818569263234 3.248444018077741e-09 8.488324613229663 2.0862495056549633 QDS(ph)DSDVVDIEEAEHDFMGEAHPVVFSR ddPTM_KYSE-520_SHP099_60min_R1 3 QDSDSDVVDIEEAEHDFMGEAHPVVFSR 28 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 QDS(0.999)DS(0.001)DVVDIEEAEHDFMGEAHPVVFSR;QDS(0.973)DS(0.027)DVVDIEEAEHDFMGEAHPVVFSR;QDS(0.976)DS(0.024)DVVDIEEAEHDFMGEAHPVVFSR 284.3 9.9277e-52 625850000.0 178984.0 168170.0 181916.0 166888.0 160657.0 166265.0 133317.0 163208.0 230628.0 169506.0 True False 169055.4007242417 160090.86077168363 193642.59643589117 182748.9853432931 173299.79188671155 165227.27846212982 146793.98340853569 162641.86954103346 188751.76885876252 168004.30871367268 1.006256339605911 0.9528973512490335 1.152604941614405 1.0877636814347993 1.031519924778024 0.9834704819608185 0.8737513015735481 0.9680815378266379 1.12349361932407 1.0 17.35813870791785 -6.178714221378489 4.1303105416735875 0.9804823736984524 1.0508772059415703 0.12162754112348328 0.07467744368757423 0.47187519750024115 14.953015643557633 0.027150077391942286 0.026926630800648128 6.626524051609933e-07 6.178714221378489 0.07039483224311793 QDS(ph)EDEEER ddPTM_KYSE-520_SHP099_60min_R1 2 QDSEDEEER 9 0 A0A3B3ISZ4;Q9BYE7-3;Q9BYE7 A0A3B3ISZ4 PCGF6 Polycomb group RING finger protein 6 1 QDS(1)EDEEER;QDS(1)EDEEER 143.31 0.00024047 316820000.0 509350.0 400810.0 380410.0 451270.0 467660.0 445030.0 509530.0 478360.0 505580.0 449820.0 True False 481095.3401359478 381554.4859719243 404931.8372775201 494158.56512072665 504462.1813785868 442252.4026945033 561038.2649335875 476700.6808100637 413779.41663463804 445834.9447546644 1.0790884514462782 0.8558200528266968 0.9082550438040414 1.1083890370967981 1.1314998685358413 0.9919644206845821 1.2583990365365318 1.069231307277594 0.9281000098866948 1.0 18.766150174588642 -5.261840726056075 24.990639789777084 1.079743571774747 0.9385310652117892 0.2321030445315525 0.10005082655140647 45.55218308521876 2836498.0329841804 0.027598965192611135 0.043947949817774286 5.472166133089455e-06 5.261840726056075 -0.1412125065629578 QDS(ph)LVINLNR ddPTM_KYSE-520_SHP099_60min_R1 2 QDSLVINLNR 10 0 Q9Y5B9 Q9Y5B9 SUPT16H FACT complex subunit SPT16 1 QDS(1)LVINLNR;QDS(1)LVINLNR 175.21 0.0001412 242280000.0 263030.0 250410.0 239050.0 208527.0 246920.0 240650.0 249440.0 263140.0 314570.0 246990.0 True False 248439.20156269454 238379.92772692678 254459.54549352342 228345.3433840712 266351.19921738096 239148.0140854149 274655.8294998023 262227.2287573375 257452.01766438124 244801.86075531237 1.0148583053909783 0.9737668128478626 1.0394510266728088 0.9327761753098355 1.088027674281479 0.9769043966722595 1.121951559732342 1.0711815177722133 1.0516750847809655 1.0 17.901254998530526 -5.777335006204962 24.999851728957676 1.0549629050294465 0.9925553236546625 0.29331954329746857 0.04646704504845463 295.05168068957096 464040.89456509287 0.013826230926485454 0.015726531394013584 1.6698020649866707e-06 5.777335006204962 -0.06240758137478397 QDS(ph)WEVVEGLR ddPTM_KYSE-520_SHP099_60min_R1 2 QDSWEVVEGLR 11 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;C9J8P4;C9JEF2;C9JZ19;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5;Q9H4L5-6 OSBPL3 Oxysterol-binding protein-related protein 3 1 QDS(1)WEVVEGLR;QDS(1)WEVVEGLR 88.561 0.0031978 210486000.0 131464.0 135101.0 90186.0 141703.0 130487.0 127442.0 107594.0 126329.0 146289.0 123263.0 True False 124171.42985301325 128610.54516926459 95999.53386270202 155170.4105154394 140755.58453052974 126646.58720579036 118470.65153624795 125890.79418441032 119726.60524558826 122170.985717163 1.016374134366743 1.0527094007984004 0.7857801367417115 1.270108525396309 1.1521195781819407 1.036633914855928 0.9697118414884394 1.0304475604040637 0.9799921359623495 1.0 16.898542175861284 -10.083477998372986 13.066107049349128 0.9999971218726252 1.034680665906683 0.006590634745467838 0.11792511639315124 0.0 0.0 0.11655300558432889 0.028268256059258423 8.25129285979853e-11 10.083477998372986 0.03468354403405771 QDT(ph)EEDEEEDEKDKGK ddPTM_KYSE-520_SHP099_60min_R1 1 QDTEEDEEEDEKDKGK 16 2 Q9Y266;A0A0A0MSS4;A0A0A0MSU9 Q9Y266 NUDC Nuclear migration protein nudC 1 QDT(1)EEDEEEDEKDKGK 71.535 0.014950999999999999 461310000.0 463300.0 427070.0 337020.0 355000.0 342480.0 430310.0 409390.0 398880.0 507020.0 415740.0 True False 437599.82543434756 406552.91615486064 358744.84845106624 388739.0932653582 369431.2275553571 427624.2756746102 450775.13646136865 397496.3783792918 414957.9489340831 412056.8670408257 1.0619889156973839 0.9866427395677408 0.8706197545678145 0.9434112724709008 0.8965539883084988 1.0377797577930963 1.093963412619712 0.9646638854338246 1.0070404891297928 1.0 18.65248392868105 -6.280992599697869 24.71333481606972 1.0230606262157953 0.9487957625983173 0.26560697596022564 0.05705895658494408 1010.1901357664226 1276776.0830843844 0.02129354722906845 0.0188064188117306 5.236093587217696e-07 6.280992599697869 -0.07426486361747797 QDVDLCLVSS(ph)CEYK ddPTM_KYSE-520_SHP099_60min_R1 2 QDVDLCLVSSCEYK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QDVDLCLVS(0.107)S(0.893)CEYK;QDVDLCLVS(0.028)S(0.972)CEYK 200.69 3.7926e-11 307470000.0 810380.0 779530.0 736370.0 690570.0 733370.0 720880.0 729730.0 857280.0 952230.0 877000.0 True False 765426.605947521 742080.2087016159 783837.5884336586 756201.5651725578 791082.046695492 716380.7205231413 803498.2298784894 854306.2957706557 779329.0357648656 869230.4622956759 0.8805795921210535 0.8537208955398887 0.9017603759117105 0.8699667096058693 0.9100947113682711 0.8241551022396849 0.924378820958961 0.9828305988200129 0.896573543576261 1.0 19.729379209279085 -7.549776367928102 0.7002824348081136 0.9906911295810732 0.8728354805701014 0.516608706931688 0.0358254370195228 0.5221514438068926 0.5412654244346542 0.03381496766383277 0.015081561970202509 2.8198345801899855e-08 7.549776367928102 -0.11785564901097179 QDVDLCLVSS(ph)CEYKHPK ddPTM_KYSE-520_SHP099_60min_R1 2 QDVDLCLVSSCEYKHPK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QDVDLCLVS(0.004)S(0.996)CEYKHPK;QDVDLCLVS(0.214)S(0.786)CEYKHPK 168.78 1.9225000000000002e-08 1565700000.0 1295600.0 1447230.0 1359190.0 1250210.0 1091720.0 1109020.0 915280.0 1146050.0 1606550.0 1133240.0 True False 1223730.4852854328 1377702.8984634816 1446805.56218089 1369029.5825106578 1177632.1529629012 1102098.1948099192 1007805.4346719806 1142074.6200400812 1314841.0178297728 1123200.37524738 1.0895032731946084 1.2265869285879187 1.288109934847767 1.2188649618365157 1.048461324368355 0.9812124524684092 0.8972623735546882 1.016803987256988 1.170620173217254 1.0 20.09918389206597 -5.826211535361099 4.253121134278434 1.0080799710467403 1.2139238311215907 0.5792160306951918 0.07812071752755863 0.15562957890777204 5.561564674166314 0.02609130755990767 0.030577958562977837 1.4920674790614878e-06 5.826211535361099 0.20584386007485045 QEAKPQQAAGMLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 15 QEAKPQQAAGMLSPK 15 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK;QEAKPQQAAGMLS(1)PK 215.08 2.5196e-14 104231480000.0 49788860.0 40831090.0 37645250.0 40055480.0 42151890.0 43212020.0 44331930.0 47128290.0 46163080.0 44292130.0 True False 47026972.684168294 38869503.14768437 40071923.0495297 43862340.77608084 45469003.931553274 42942317.754495084 48813434.122342624 46964812.96181559 37781028.34854643 43899736.18695566 1.0712358836029146 0.8854154153034303 0.912805554887062 0.9991481631981667 1.0357466326885105 0.978190793029297 1.1119300105691072 1.0698199360881508 0.8606208517438121 1.0 25.38770893420191 -5.449673664261784 6.418817065283273 1.016567216355808 0.9497822929573005 0.08137745111132011 0.07657221715709683 0.49999335125625316 35.65593002300269 0.021669671140047992 0.03210349088682114 3.5508010181594684e-06 5.449673664261784 -0.06678492339850739 QEASES(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 QEASESPVK 9 0 E9PPI7;Q01167-3;Q01167-2;Q01167 E9PPI7 FOXK2 Forkhead box protein K2 1 QEAS(0.204)ES(0.796)PVK;QEAS(0.029)ES(0.971)PVK 117.93 0.00080365 601700000.0 1001240.0 877640.0 719340.0 674590.0 751890.0 884620.0 744050.0 903380.0 1026380.0 935490.0 True False 945699.2212775437 835476.8570355022 765709.807384694 738702.8307771201 811059.4653311069 879098.7584468725 819265.8352282218 900246.3856304764 840015.264934253 927202.2864002058 1.019949190320864 0.9010729042517563 0.8258282131265072 0.7967008295946714 0.8747384224859768 0.9481197052046844 0.8835891015853302 0.9709277024387163 0.905967637542774 1.0 19.822524598346092 -7.728102975107637 0.7064217628145322 0.9922425952593915 0.8829503957781699 0.20338753319563319 0.061345068804360324 1.0672230282308837 1.1949248296108226 0.06329007125813857 0.02674401707407265 1.8702386374731702e-08 7.728102975107637 -0.1092921994812216 QEDENFNSLLQNGDILNS(ph)STEEKFK ddPTM_KYSE-520_SHP099_60min_R1 1 QEDENFNSLLQNGDILNSSTEEKFK 25 1 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 QEDENFNSLLQNGDILNS(0.542)S(0.366)T(0.092)EEKFK 154.19 2.5634e-07 76042000.0 79494.0 86535.0 87282.0 86611.0 88150.0 95493.0 75798.0 97641.0 130320.0 85253.0 True False 75084.30935263971 82377.72870831696 92908.33737613777 94842.48339945334 95086.9034951083 94896.99276567025 83460.40155719215 97302.30616058063 106657.17309985764 84497.72474583045 0.8885956347167178 0.974910613937944 1.0995365574115337 1.12242647579849 1.1253190991962227 1.1230715744254753 0.9877236553793777 1.151537588180823 1.2622490536956221 1.0 16.366624874292196 -4.602934468326383 2.3214667426729325 1.1134859955414758 0.8882174181926996 0.5047244000475097 0.07266099467906814 0.27655378737932285 2.6893055158835164 0.019896439399016336 0.09409168870885758 2.4949711703665715e-05 4.602934468326383 -0.22526857734877614 QEDENFNSLLQNGDILNSS(ph)TEEKFK ddPTM_KYSE-520_SHP099_60min_R1 1 QEDENFNSLLQNGDILNSSTEEKFK 25 1 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 QEDENFNSLLQNGDILNS(0.185)S(0.658)T(0.156)EEKFK 52.669 0.047438 190600000.0 70003.0 61422.0 68677.0 59074.0 96278.0 76405.0 54827.0 72189.0 89062.0 77464.0 True False 66119.79404247917 58471.19492369836 73104.02930708515 64688.37519875426 103854.53085311441 75928.12805400437 60369.44821995527 71938.59320803925 72890.5858703155 76777.72922608006 0.8611845480319237 0.7615645254566439 0.9521514903341656 0.8425408754701844 1.352664788343816 0.9889342758552554 0.7862885348196625 0.9369721393583879 0.9493714727571785 1.0 16.228400271295673 -5.0429512156053065 2.169055728742808 0.9860292808242308 0.8154955265078129 0.1680057808571248 0.14352985341962726 0.599991021006706 5.531777581793486 0.04430625019096664 0.10728828336215383 9.058343477550295e-06 5.0429512156053065 -0.17053375431641793 QEDKDDLDVTELTNEDLLDQLVK ddPTM_KYSE-520_SHP099_60min_R1 1 QEDKDDLDVTELTNEDLLDQLVK 23 1 P42166;G5E972;P42167;H0YJH7;P42167-2;P42167-3 P42166;G5E972 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 0 179.58 4.8166000000000005e-11 78592000.0 55950.0 63834.0 54563.0 44267.0 60667.0 56636.0 47456.0 45609.0 63639.0 55316.0 False True 52846.341966440166 60767.318823212576 58080.218283886745 48474.122370641126 65441.147751987955 56282.51371594251 52253.31560592769 45450.79302422063 52083.76180863899 54825.94327519678 0.9638929822179241 1.1083679585446122 1.0593564800582682 0.8841457068477065 1.1936164494883115 1.0265671752045291 0.9530764540364425 0.829001569495705 0.9499838707235092 1.0 15.742571108094316 -6.8269037525693665 3.8401431362975385 0.9135849781444056 1.0439519453034976 0.26391595534484724 0.086660698858216 0.27167739843261796 7.964914977537518 0.03719898586509995 0.024895814255459475 1.4896911833611423e-07 6.8269037525693665 0.1303669671590919 QEEAEEQGAGS(ph)PGQPAHLAR ddPTM_KYSE-520_SHP099_60min_R1 2 QEEAEEQGAGSPGQPAHLAR 20 0 Q96S99 Q96S99 PLEKHF1 Pleckstrin homology domain-containing family F member 1 1 QEEAEEQGAGS(1)PGQPAHLAR;QEEAEEQGAGS(1)PGQPAHLAR 209.62 8.2515e-19 937260000.0 488650.0 422270.0 413390.0 395950.0 468270.0 423870.0 458220.0 477440.0 465080.0 454190.0 True False 461543.6104003756 401983.5153598076 440037.78084738576 433580.9689532919 505120.1849081608 421224.47010340716 504541.34939624404 475783.87207533326 380633.195712721 450166.229954473 1.0252737315436862 0.8929668389396106 0.9775006465764623 0.963157474067172 1.1220748054762917 0.9357087272983742 1.12078897932275 1.0569070721352223 0.8455392039318805 1.0 18.7800983088731 -5.5734468705375955 24.999996326547805 1.020076998553044 0.9600693383695412 0.07230883389317222 0.08303351837302853 243.39257018290797 120327.6237895049 0.023873396163606203 0.03082043163898639 2.670257413378434e-06 5.5734468705375955 -0.06000766018350279 QEEAEY(ph)VR ddPTM_KYSE-520_SHP099_60min_R1 1 QEEAEYVR 8 0 P46108;P46108-2 P46108 CRK Adapter molecule crk 1 QEEAEY(1)VR 102.61 0.0074711 305870000.0 427470.0 393700.0 399630.0 298020.0 356880.0 354390.0 313240.0 350410.0 411860.0 341340.0 True False 403757.3869596815 374786.0610442526 425390.78923060745 326343.7311970198 384964.4256305646 352178.1205557045 344905.3561277978 349194.50949630875 337076.60614569776 338315.99315850163 1.1934327525879644 1.1077988289742622 1.2573771203045405 0.9646121903676224 1.13788420711819 1.040973905099155 1.0194769478905747 1.0321548982542794 0.9963365993985889 1.0 18.368011853475544 -5.396728925220892 0.5375386377746775 1.0027219751902359 1.2146817627186208 0.49509505665839093 0.0644983975255763 1.2765779590920627 0.6255044626905627 0.044673082965129424 0.14949796447418667 4.011170058104131e-06 5.396728925220892 0.21195978752838496 QEEEAAQQGPVVVS(ph)PASDYKDK ddPTM_KYSE-520_SHP099_60min_R1 4 QEEEAAQQGPVVVSPASDYKDK 22 1 I3L0X5;I3L4C3;O75391 I3L0X5 SPAG7 Sperm-associated antigen 7 1 QEEEAAQQGPVVVS(0.962)PAS(0.009)DY(0.029)KDK;QEEEAAQQGPVVVS(0.997)PAS(0.003)DYKDK;QEEEAAQQGPVVVS(0.995)PAS(0.005)DYKDK;QEEEAAQQGPVVVS(0.996)PAS(0.004)DYKDK 165.31 1.0979000000000001e-09 3521160000.0 3334750.0 3605840.0 3053410.0 2448930.0 2613430.0 3511320.0 2841540.0 3498060.0 4381510.0 3365380.0 True False 3149764.7698406884 3432610.033923819 3250237.694228739 2681675.5709023485 2819092.0726173706 3489404.549421981 3128790.593957935 3485926.0463133426 3585938.2328787316 3335565.3514260193 0.9442971244721985 1.029093923300382 0.9744188321296715 0.803964332389974 0.8451616969255763 1.0461208766094756 0.9380090822145984 1.0450780239766675 1.0750616027791728 1.0 21.669499876633118 -6.928758682598318 1.4849323595117383 1.042579935637944 0.9295431710855919 0.2863402233998408 0.07154127946101031 0.5915047831279816 2.5686538738758786 0.051489798641431474 0.02625429708083166 1.1782604966431963e-07 6.928758682598318 -0.11303676455235201 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 3 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYSPGK 34 2 P84157-2;P84157-3;P84157 P84157-2 MXRA7 Matrix-remodeling-associated protein 7 1 QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYS(1)PGK;QEEEQDLDGEKGPSSEGPEEEDGEGFS(0.015)FKYS(0.985)PGK;QEEEQDLDGEKGPSSEGPEEEDGEGFSFKYS(1)PGK 310.72 2.1273e-67 3090040000.0 1047820.0 1190420.0 1032830.0 1006620.0 1093850.0 1033960.0 1048990.0 956310.0 1514940.0 919330.0 True False 989695.3358226151 1133230.4363431504 1099407.8743864282 1102288.8621486616 1179929.7718448588 1027506.6721120119 1155032.1463558248 952992.7838144323 1239865.0845296062 911185.4514279179 1.0861623550635762 1.2436880270281598 1.2065687316051272 1.2097305333631763 1.294939213522112 1.1276592163558001 1.2676147808832712 1.0458823528415628 1.3607165068171518 1.0 19.797385186671207 -10.002876627366081 6.133266810360602 0.9999998444845868 1.203675529648213 0.31195782680137585 0.09122044876086698 1.7663316413979723e-07 2.8612837171628778e-08 0.08011521518359245 0.01943077902295859 9.933982089189473e-11 10.002876627366081 0.2036756851636261 QEEKHLK ddPTM_KYSE-520_SHP099_60min_R1 2 QEEKHLK 7 1 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 0 ; 81.297 0.013324 2329900000.0 5559000.0 4780300.0 3578400.0 3385100.0 4887000.0 4874200.0 3902400.0 4744500.0 4636500.0 4458600.0 False True 5250631.188408231 4550647.212623412 3809069.389642434 3706818.8862325763 5271579.096773626 4843778.309807318 4296892.6757537965 4728042.436874626 3794628.4766535447 4419100.272738308 1.1881674694732969 1.0297678105872874 0.8619558630838974 0.8388175550349383 1.192907780186458 1.0961005659203695 0.9723455931202971 1.0699106481113816 0.8586880230038756 1.0 22.075321236635663 -7.7519302363272855 24.99911332281115 0.9293439908893065 1.0247271665164503 0.10691599703483512 0.11659495738436974 456.60344196253294 1200411.5856103387 0.08555381168114211 0.031417649229757816 1.770393325782763e-08 7.7519302363272855 0.09538317562714382 QEEKPKPDPVLKS(ph)PS(ph)PVLR ddPTM_KYSE-520_SHP099_60min_R1 1 QEEKPKPDPVLKSPSPVLR 19 3 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-2 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 2 QEEKPKPDPVLKS(1)PS(1)PVLR 82.885 0.006848000000000001 4717000000.0 1273600.0 1026600.0 1023100.0 1080900.0 1259500.0 1276600.0 1144200.0 1261000.0 1459000.0 1004900.0 True False 1202950.8691413437 977280.5950419836 1089050.6630178797 1183628.4110155657 1358615.4844252854 1268632.2658692726 1259866.9023158825 1256625.8853196122 1194082.3783969611 995997.3678003697 1.2077851890291884 0.9812080098166107 1.0934272501372322 1.188385079399932 1.364075376449786 1.2737305407453123 1.2649299516707164 1.2616759099422448 1.1988810583245377 1.0 19.925782404012928 -5.368991786747014 3.7901987916908446 1.24635474541302 1.082523626472836 0.23484205679706138 0.10240313531463241 0.26404244555617334 6.799007775960171 0.028177740625420562 0.04356290481660994 4.275709721750197e-06 5.368991786747014 -0.16383111894018398 QEES(ph)ESPVERPLK ddPTM_KYSE-520_SHP099_60min_R1 1 QEESESPVERPLK 13 1 D6RBF8;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3 D6RBF8 SRPK1 SRSF protein kinase 1 1 QEES(0.562)ES(0.438)PVERPLK 51.695 0.049283 578700000.0 1244200.0 1062600.0 1002800.0 1200000.0 1224000.0 1243500.0 1230200.0 1386800.0 1288300.0 1256700.0 True False 1175181.7457487918 1011551.1010048831 1067442.0925367305 1314047.639206843 1320321.8363926574 1235738.8552470969 1354560.6215949988 1381989.514481552 1054377.1954001423 1245566.6156978062 0.9434916855815194 0.8121212372396316 0.8569931781117265 1.0549798161302448 1.0600170394362816 0.9921098074347444 1.0875055613433655 1.1095267784672578 0.8465040585640989 1.0 20.24837075153467 -5.257650823062076 24.902246213975527 1.0292120173892598 0.864993942111363 0.456647865302529 0.07489664551644963 253.34975489228893 1665265.2382981037 0.020033214906434182 0.03310461234811295 5.525214933364956e-06 5.257650823062076 -0.16421807527789678 QEESES(ph)PVERPLKENPPNK ddPTM_KYSE-520_SHP099_60min_R1 2 QEESESPVERPLKENPPNK 19 2 D6RBF8;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3 D6RBF8 SRPK1 SRSF protein kinase 1 1 QEES(0.137)ES(0.863)PVERPLKENPPNK;QEES(0.043)ES(0.957)PVERPLKENPPNK 149.18 9.6818e-07 1736630000.0 685230.0 624360.0 567310.0 588300.0 612550.0 649490.0 539930.0 565160.0 755370.0 538840.0 True False 647218.9259278603 594364.8084165341 603879.7103280933 644211.855121156 660754.2000672561 645436.2919939173 594511.3936089963 563199.5918693354 618213.8493281101 534066.2968111761 1.2118700052639537 1.1129045438092438 1.1307205003082235 1.2062394855613268 1.2372138141135531 1.208532153868749 1.1131790138391584 1.0545499598684835 1.157560125061936 1.0 19.026659317742727 -7.897283087421713 0.7015550266601115 1.0083929166102548 1.1795995045989545 0.5164262399921331 0.05031048084715371 0.6216406556055393 0.7115566091696286 0.05341259908891248 0.02179113516651279 1.2668258379400952e-08 7.897283087421713 0.1712065879886997 QEFEFWYPVDLR ddPTM_KYSE-520_SHP099_60min_R1 1 QEFEFWYPVDLR 12 0 A0A6I8PTV8;A0A6I8PIP7;A0A6I8PS05;A0A6I8PLB8;A0A6I8PRS0;A0A6I8PL42;B4DER1;A0A6I8PIT3;A0A6I8PIV1;Q9P2J5-2;Q9P2J5;A0A6I8PRP1;A0A6I8PLB3 A0A6I8PTV8 LARS Leucine--tRNA ligase, cytoplasmic 0 119.76 0.00097489 52939000.0 51009.0 42286.0 32629.0 33754.0 41247.0 44269.0 33781.0 34358.0 28096.0 23303.0 False True 48179.42908607949 40254.51708741998 34732.317548245854 36961.97001148985 44492.904236673094 43992.70075024822 37195.91315078899 34238.82011721749 22994.474642523 23096.55354945965 2.086000795872277 1.7428798197626219 1.5037878908586526 1.6003240454182215 1.9263871616773756 1.9047300999277201 1.610452965250272 1.4824211778565772 0.9955803402997744 1.0 14.49538996937013 -7.574696146172787 1.8595406706678024 0.9637713304257639 1.7691182067923559 0.7772606988359549 0.16364856772514222 0.17385798597964677 1.085669434068385 0.15659250659673024 0.04951217116270899 2.6625872855822494e-08 7.574696146172787 0.805346876366592 QEGPRKS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 QEGPRKSPR 9 2 Q9UGU0;Q9UGU0-2 Q9UGU0 TCF20 Transcription factor 20 1 QEGPRKS(1)PR;QEGPRKS(1)PR 51.286 0.053892999999999996 1291050000.0 631180.0 659820.0 678520.0 690130.0 577630.0 551200.0 453680.0 485380.0 809480.0 560030.0 True False 596167.1871738642 628121.2567899885 722258.4848703857 755719.7477048499 623086.1947348781 547759.7563427411 499542.4018901146 483696.33006854384 662498.8373302084 555068.5698967464 1.0740424147682563 1.1316102025139547 1.3012058762482983 1.3614889919734214 1.1225391393549526 0.9868325933940649 0.8999652096731746 0.8714172559950941 1.1935441371747026 1.0 19.08230647894353 -6.119572210140338 3.6631705515192534 0.9768869121874773 1.2191134322581048 0.4810096122019685 0.11032712481724663 0.21292641204236812 5.14315741010721 0.039693879879862226 0.040128922919248654 7.59325159182568e-07 6.119572210140338 0.2422265200706275 QEKPAEKPAETPVAT(ph)SPTATDSTSGDSSR ddPTM_KYSE-520_SHP099_60min_R1 5 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 P54727;P54727-2;H0Y579 P54727 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAETPVAT(0.487)S(0.487)PT(0.023)AT(0.003)DSTSGDSSR;QEKPAEKPAETPVAT(0.44)S(0.44)PT(0.085)AT(0.035)DSTSGDSSR;QEKPAEKPAETPVAT(0.674)S(0.292)PT(0.034)ATDSTSGDSSR;QEKPAEKPAETPVAT(0.462)S(0.462)PT(0.064)AT(0.011)DSTSGDSSR;QEKPAEKPAETPVAT(0.895)S(0.072)PT(0.032)ATDSTSGDSSR 263.33 1.0761e-40 59098900000.0 14519160.0 13997090.0 13080280.0 11484650.0 12360990.0 14720130.0 14753230.0 16036910.0 18040550.0 14769130.0 True False 13713753.25157212 13324648.786339562 13923455.777987959 12576147.683014074 13333729.588587616 14628256.208515035 16244630.466049405 15981281.702252941 14764840.885256546 14638286.99840927 0.9368413977033229 0.9102601136176345 0.9511670169809493 0.8591270060752815 0.9108804595808636 0.9993147565766866 1.109735754450961 1.091745345885732 1.008645402762019 1.0 23.803243400654882 -6.4366355383101315 3.529679455476308 1.060081302461965 0.91289721511668 0.7404890050079398 0.03873210649694752 0.1186999181037219 2.796784881281216 0.014739579142262801 0.01248638434351616 3.659017290179329e-07 6.4366355383101315 -0.1471840873452851 QEKPAEKPAETPVATS(ph)PTATDSTSGDSSR ddPTM_KYSE-520_SHP099_60min_R1 7 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 P54727;P54727-2;H0Y579 P54727 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAET(0.004)PVAT(0.347)S(0.426)PT(0.128)AT(0.064)DS(0.009)T(0.009)S(0.011)GDS(0.002)S(0.002)R;QEKPAEKPAET(0.055)PVAT(0.309)S(0.624)PT(0.011)AT(0.002)DSTSGDSSR;QEKPAEKPAET(0.001)PVAT(0.056)S(0.879)PT(0.045)AT(0.012)DS(0.001)T(0.001)S(0.001)GDS(0.002)S(0.002)R;QEKPAEKPAET(0.001)PVAT(0.344)S(0.586)PT(0.068)AT(0.003)DSTSGDSSR;QEKPAEKPAETPVAT(0.169)S(0.825)PT(0.004)AT(0.001)DSTSGDSSR;QEKPAEKPAETPVAT(0.02)S(0.98)PTATDSTSGDSSR;QEKPAEKPAETPVAT(0.065)S(0.454)PT(0.454)AT(0.014)DS(0.009)T(0.002)SGDSSR 181.08 4.0725e-11 96364700000.0 8768730.0 8320260.0 7147500.0 7585067.0 7467446.0 8237472.0 8070979.0 8756880.0 11114600.0 8330700.0 True False 8282311.066870108 7920542.220635126 7608239.286404339 8305949.487146448 8055091.516244285 8186058.881712912 8886872.322484303 8726504.427151164 9096468.816265164 8256896.479186528 1.0030779830833103 0.9592638397006353 0.9214405564587997 1.0059408529686147 0.9755592233170246 0.9914207962214157 1.0762969288625308 1.0568746319090223 1.1016813447031797 1.0 22.97716818687103 -6.663992397779138 4.300070655414646 1.0634583054387081 0.9722932428308495 0.6076699648683268 0.03260909256115872 0.1396219534934129 4.639547117043036 0.012841475970996202 0.009653748221499852 2.167742050292846e-07 6.663992397779138 -0.09116506260785862 QEKPAEKPAETPVATSPT(ph)ATDSTSGDSSR ddPTM_KYSE-520_SHP099_60min_R1 2 QEKPAEKPAETPVATSPTATDSTSGDSSR 29 2 P54727;P54727-2;H0Y579 P54727 RAD23B UV excision repair protein RAD23 homolog B 1 QEKPAEKPAETPVAT(0.025)S(0.107)PT(0.73)AT(0.132)DS(0.005)T(0.001)SGDSSR;QEKPAEKPAETPVAT(0.001)S(0.008)PT(0.285)AT(0.184)DS(0.184)T(0.228)S(0.1)GDS(0.006)S(0.006)R 85.0 0.0042701 88300000000.0 395540.0 364310.0 367120.0 259445.0 357200.0 349530.0 356120.0 388690.0 420560.0 417610.0 True False 373598.6077105581 346808.0007595419 390785.1426127682 284102.5747950165 385309.60781001387 347348.45361842983 392120.0849962693 387341.72511092765 344196.9054548505 413910.3002956632 0.9026076602676721 0.8378820254335565 0.9441300260796209 0.686386820023752 0.930901230374747 0.8391877500277546 0.9473552233809385 0.9358107900050877 0.8315736651370715 1.0 18.658958625398277 -6.757502765739467 24.96585268827134 0.9233358215423962 0.8555721159100608 0.16975541542724282 0.07743682878884131 190.7641759426691 1209827.5217656163 0.029221821620675503 0.02177115358752907 1.7478221316388863e-07 6.757502765739467 -0.06776370563233547 QEKPS(ph)SPSPMPSSTPSPSLNLGNTEEAIR ddPTM_KYSE-520_SHP099_60min_R1 1 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPS(0.503)S(0.415)PS(0.083)PMPSSTPSPSLNLGNTEEAIR 89.823 0.0029101999999999995 1174200000.0 82993.0 102050.0 79184.0 93377.0 76854.0 85620.0 79099.0 106140.0 124470.0 98268.0 True False 78389.21284755612 97147.36481982701 84288.32733887958 102251.52200518126 82901.97256055652 85085.61382087364 87095.0988518476 105771.82511326225 101869.3856333584 97397.42197134704 0.8048386832109081 0.9974326101609384 0.8654061435391589 1.0498380751316214 0.8511721448330031 0.8735920530412462 0.8942238622852847 1.0859817741826765 1.045914599909297 1.0 16.571595965426102 -7.2560449278135 24.63220974611077 1.0494611436181287 0.9094981397605015 0.4505163225808022 0.07003048680486658 312.9230858413304 1428882.7879547218 0.032831361610621265 0.018241226001367936 5.545683398325648e-08 7.2560449278135 -0.13996300385762717 QEKPSS(ph)PSPMPSSTPSPSLNLGNTEEAIR ddPTM_KYSE-520_SHP099_60min_R1 1 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPS(0.123)S(0.852)PS(0.025)PMPSSTPSPSLNLGNTEEAIR 159.2 4.0545e-10 498970000.0 137920.0 162110.0 104710.0 134420.0 111600.0 142520.0 142660.0 187570.0 180990.0 164800.0 True False 130269.30266329633 154321.99226792922 111459.77414192367 147195.23638515326 120382.28508285985 141630.47981489036 157081.46502742855 186919.36344916708 148126.77838661146 163340.00021245994 0.7975346056927402 0.9447899600048929 0.6823789273720184 0.9011585416535641 0.7370043156990079 0.8670899940655594 0.961684001610807 1.1443575560550812 0.9068616272434168 1.0 17.317518609130207 -6.780182820631477 3.0734892714974396 1.0234540608835607 0.8171232220760788 0.5111925692936882 0.08864363454010148 0.19033037580250728 3.698427559253191 0.03715561100007941 0.025145930242155452 1.658888434657103e-07 6.780182820631477 -0.20633083880748193 QEKPSSPS(ph)PMPSSTPSPSLNLGNTEEAIR ddPTM_KYSE-520_SHP099_60min_R1 2 QEKPSSPSPMPSSTPSPSLNLGNTEEAIR 29 1 O95810 O95810 SDPR Serum deprivation-response protein 1 QEKPSS(0.001)PS(0.65)PMPS(0.332)S(0.016)TPSPSLNLGNTEEAIR;QEKPS(0.025)S(0.142)PS(0.822)PMPS(0.004)S(0.006)TPSPSLNLGNTEEAIR 237.74 4.361100000000001e-31 1629020000.0 338560.0 366960.0 238370.0 241570.0 229690.0 390000.0 272680.0 320530.0 347280.0 341360.0 True False 319779.40189737274 349330.6907818108 253735.71160548477 264528.74016933097 247765.29624267085 387565.8653368458 300245.1555003448 319418.1562422648 284222.70621637907 338335.8159740615 0.945153858383969 1.0324969284617276 0.7499522652515671 0.7818526082074948 0.7323058468680295 1.1455064673571496 0.8874175931860643 0.9440861450705915 0.8400609477246979 1.0 18.368096382260738 -6.231816271238955 24.99673147188361 0.9551699483521762 0.8494214900273864 0.20494578254214268 0.11272006790114888 1366.7429514970045 1153293.390681464 0.03930895129103357 0.039303215957110525 5.863861833716193e-07 6.231816271238955 -0.10574845832478974 QEKT(ph)PKT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 QEKTPKTPK 9 2 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 2 QEKT(1)PKT(1)PK;QEKT(1)PKT(1)PK 118.76 0.00065265 1117720000.0 1406100.0 1431770.0 1784830.0 993240.0 1197000.0 983090.0 1022700.0 811110.0 2118160.0 1133470.0 True False 1328100.8300091433 1362985.620069416 1899882.9976289696 1087637.2309715047 1291197.090001641 976954.1706512796 1126084.4965901528 808296.4487244966 1733555.5384683434 1123428.337626317 1.1821856237090096 1.2132377067764355 1.6911474759869576 0.9681411751367826 1.1493364078120027 0.8696185933100802 1.0023643332421612 0.7194908848679569 1.543094010011497 1.0 20.09947666869866 -5.311158004909202 24.999745125708127 1.0207060088709834 1.3472959339578796 0.2795128820501057 0.2387442697447925 446.7869804586878 224654.5230985723 0.06496123014243946 0.09635326318447196 4.884746103005967e-06 5.311158004909202 0.3265899250868962 QELANSSDATLPDRPLS(ph)PPLTAPPTMK ddPTM_KYSE-520_SHP099_60min_R1 3 QELANSSDATLPDRPLSPPLTAPPTMK 27 1 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 QELANS(0.001)S(0.001)DAT(0.002)LPDRPLS(0.952)PPLT(0.043)APPT(0.002)MK;QELANSSDATLPDRPLS(1)PPLTAPPTMK;QELANSSDATLPDRPLS(1)PPLTAPPTMK 188.74 1.7439e-15 1307160000.0 669458.0 825480.0 510474.0 535696.0 546583.0 837182.0 695738.0 777736.0 875337.0 844370.0 True False 632321.8302085631 785822.7017292584 543379.9708272788 586608.3867771248 589595.9724681425 831956.8366011042 766069.9867885391 775038.2153409477 716397.8662500761 836889.5387099193 0.7555618764016323 0.9389801943762119 0.6492851752752329 0.7009388451448354 0.7045087137509397 0.9941059101821025 0.9153776590031824 0.9260938026966897 0.8560244012064204 1.0 19.674677688046287 -6.2586767611250895 24.983677004039503 0.9322673004549109 0.7520571432679517 0.5770350215352633 0.08058325919902522 199.31936584973192 1802545.066315693 0.028464684094277885 0.02724419833581818 5.512178069205226e-07 6.2586767611250895 -0.1802101571869592 QELEQHSVDTASTSDAVTFITYVQSLK ddPTM_KYSE-520_SHP099_60min_R1 1 QELEQHSVDTASTSDAVTFITYVQSLK 27 0 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 74.905 0.010584 28526000.0 24192.0 24724.0 19468.0 32373.0 21874.0 22181.0 22037.0 27691.0 27914.0 21892.0 False True 22850.02153444361 23536.221928519393 20722.938429901347 35449.72018670262 23595.35935396483 22042.560151375827 24264.71502039423 27594.946384127976 22845.521254676365 21698.053911718267 1.0530908268277097 1.0847158009782805 0.9550597723747798 1.6337741776721102 1.0874412723816629 1.01587728747745 1.1182899221800628 1.2717705696742245 1.0528834220629526 1.0 14.405278033379751 -9.420253516077542 14.085046390285987 1.0000110338868 1.1466364105184197 0.050712071391371794 0.1823303231434799 0.0 0.0 0.17730349203139711 0.04300241326095939 3.799675284354756e-10 9.420253516077542 0.14662537663161967 QELNEPPKQST(ph)SFLVLQEILESEEKGDPNKPSGFR ddPTM_KYSE-520_SHP099_60min_R1 1 QELNEPPKQSTSFLVLQEILESEEKGDPNKPSGFR 35 3 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 QELNEPPKQS(0.089)T(0.508)S(0.403)FLVLQEILESEEKGDPNKPSGFR 134.1 1.3443e-06 119890000.0 101730.0 103560.0 94121.0 72191.0 72408.0 76893.0 73571.0 77943.0 126960.0 81377.0 True False 96086.83410627273 98584.82215327088 100188.19025892463 79052.01093498437 78106.09765483618 76413.0822649899 81008.27466376647 77672.633925033 103907.26440115033 80656.06309034806 1.1913156980974842 1.2222865631668591 1.2421656403771824 0.980112441719764 0.9683847024289358 0.9473941491465394 1.004366833191745 0.9630104786794128 1.28827592644532 1.0 16.299495367506893 -5.259612704939301 24.984246644887495 1.0140745705402874 1.2189590371685854 0.48203813930021544 0.09332058049523037 134.19906228675865 1835489.8354577 0.025722248706564383 0.04179196518647565 5.500311619085406e-06 5.259612704939301 0.20488446662829807 QELQY(ph)KEK ddPTM_KYSE-520_SHP099_60min_R1 2 QELQYKEK 8 1 Q9ULE0;Q9ULE0-2 Q9ULE0 WWC3 Protein WWC3 1 QELQY(1)KEK;QELQY(1)KEK 55.567 0.044396 2508700000.0 5828000.0 3427650.0 4773300.0 2828460.0 6371200.0 6090300.0 4158700.0 3982800.0 4193200.0 4477800.0 True False 5504709.222170039 3262980.5489924555 5080994.555550037 3097275.987992493 6872577.192830794 6052288.178617925 4579101.981000746 3968984.596392511 3431820.5819699424 4438130.175675685 1.2403217130358222 0.7352151513887675 1.1448502757755363 0.6978785807067832 1.548529881006583 1.3637022662807525 1.031763783337788 0.8942920642899466 0.7732582069761988 1.0 22.081520553453842 -7.180475960025851 4.014967401186381 0.8737958128824505 1.1107652180371272 0.14638393363368252 0.24763810354099655 0.4750159801968537 14.312623307819877 0.1325830096616493 0.07158257415261214 6.599697652757023e-08 7.180475960025851 0.2369694051546768 QENKRPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 QENKRPSPR 9 2 Q9Y4B6;Q9Y4B6-2;Q9Y4B6-3 Q9Y4B6 VPRBP Protein VPRBP 1 QENKRPS(1)PR;QENKRPS(1)PR 47.711999999999996 0.064574 6965900000.0 563410.0 534240.0 519540.0 410480.0 411230.0 462400.0 378960.0 376840.0 625140.0 377760.0 True False 532156.5241700094 508574.30848941085 553030.3796933912 449491.89578468783 443591.4614213656 459513.9900814296 417268.975093189 375532.8299951168 511630.33449696854 374413.34029283316 1.4213075948463894 1.3583231518718024 1.477058427621354 1.2005231849728828 1.1847640393219627 1.2272906454722958 1.114460758173942 1.002989983480311 1.3664853236714705 1.0 18.51427231328827 -5.372873259445132 4.524436365199107 1.1548256481017711 1.4120386736930122 0.5754519090083983 0.10367062640520312 0.1634183395094656 5.3892704733366665 0.028731165476776947 0.043545147694360825 4.237666162044109e-06 5.372873259445132 0.25721302559124104 QEPCAQHNGSEPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 QEPCAQHNGSEPASPK 16 0 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 QEPCAQHNGSEPAS(1)PK 127.1 0.0015488 0.0 143570.0 143470.0 137310.0 207650.0 165710.0 148780.0 172630.0 160770.0 171260.0 130520.0 True False 135605.88590030046 136577.4858471396 146161.22230376798 227384.99356775105 178750.4342390745 147851.40883286102 190081.12510644167 160212.32639400006 140163.5011132719 129363.69434302342 1.0482530403060777 1.055763647913362 1.1298473118447274 1.7577187689523797 1.3817666165678306 1.1429126972890493 1.4693544898495141 1.238464371380565 1.0834840627047297 1.0 16.98107325915149 -9.616127871610802 11.799672790309609 0.999979547651235 1.2676036154174815 0.11285318255209942 0.2135916773693106 0.0 0.0 0.21972511369996853 0.05329116778740121 2.420316315339372e-10 9.616127871610802 0.2676240677662465 QEPCAQHNGSEPAS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 6 QEPCAQHNGSEPASPKR 17 1 M0QZ09;Q8N6T7-2;Q8N6T7 M0QZ09 SIRT6 NAD-dependent protein deacetylase sirtuin-6 1 QEPCAQHNGSEPAS(1)PKR;QEPCAQHNGSEPAS(1)PKR;QEPCAQHNGS(0.001)EPAS(0.999)PKR;QEPCAQHNGS(0.001)EPAS(0.999)PKR;QEPCAQHNGS(0.032)EPAS(0.968)PKR;QEPCAQHNGS(0.002)EPAS(0.998)PKR 199.28 7.8596e-13 3965960000.0 2657240.0 2759430.0 2542190.0 3662130.0 2557170.0 2396587.0 2403880.0 2234425.0 3273090.0 2327938.0 True False 2509837.600123389 2626862.840811129 2706063.635047817 4010177.734140471 2758404.7306929836 2381629.0115641896 2646887.650007953 2226674.301193718 2678779.363884384 2307314.28042836 1.0877744836986099 1.1384937297416822 1.1728196969098756 1.7380283943789265 1.1955045544037795 1.0322083262632227 1.1471725687566714 0.9650502838219025 1.1609945756444848 1.0 21.13778309694038 -6.004778190273455 24.978980918234583 1.0697895835284916 1.2910121635556462 0.26415820552454017 0.1760454860875648 311.43935983658383 1628124.823909564 0.0585115778868795 0.06463185267315595 9.890581130372482e-07 6.004778190273455 0.22122258002715456 QEPES(ph)EEEEEEKQEK ddPTM_KYSE-520_SHP099_60min_R1 8 QEPESEEEEEEKQEK 15 1 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK;QEPES(1)EEEEEEKQEK 235.5 8.0055e-19 19234810000.0 10592340.0 9156930.0 9026120.0 8598000.0 9155920.0 9370200.0 9741500.0 9782730.0 11383400.0 9225100.0 True False 10004761.784893705 8717017.337967861 9607958.137502626 9415151.334917031 9876438.81394137 9311717.106100794 10726265.887878131 9748795.992936358 9316461.51216174 9143372.79101919 1.0942091079038785 0.9533700022085828 1.0508111565723057 1.0297241018286805 1.0801745744898659 1.0184116210647076 1.173119168717882 1.066214428280976 1.018930511212729 1.0 23.12429501155534 -5.597092750927696 2.2312075973574665 1.0667067071922136 1.024671688030255 0.03417015119188538 0.05600548380678323 0.7713806113205303 7.788267029599177 0.0177807819072011 0.025600709663472714 2.5287578797826547e-06 5.597092750927696 -0.04203501916195851 QEPES(ph)EEEEEEKQEKEEK ddPTM_KYSE-520_SHP099_60min_R1 7 QEPESEEEEEEKQEKEEK 18 2 P49756 P49756 RBM25 RNA-binding protein 25 1 QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK;QEPES(1)EEEEEEKQEKEEK 151.33 2.1926e-06 5537580000.0 5718426.0 6389897.0 6167119.0 4784712.0 5234414.0 4959835.0 3959248.0 4439718.0 7651650.0 4738644.0 True False 5401213.510380381 6082916.75668906 6564661.358479287 5239449.589903887 5646332.602058356 4928878.830007627 4359487.426376808 4424317.6544959685 6262303.242399674 4696663.300769244 1.1500107979841223 1.2951570864559883 1.3977287572230463 1.1155684907295234 1.2022008478090327 1.0494426605373965 0.9282094855858176 0.9420129507199996 1.3333515394586621 1.0 22.163204741220557 -5.887676989611966 1.600619347056022 1.0416258168093777 1.2709775552844234 0.3423411789778724 0.1267501471968735 0.4116780316443227 2.1764528759893804 0.0486989211962511 0.05918361193417929 1.295158769179711e-06 5.887676989611966 0.22935173847504564 QEPGGS(ph)HGS(ph)ETEDTGR ddPTM_KYSE-520_SHP099_60min_R1 1 QEPGGSHGSETEDTGR 16 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 2 QEPGGS(1)HGS(0.989)ET(0.009)EDT(0.002)GR 148.19 3.4915e-06 48133000.0 143130.0 147460.0 144320.0 132370.0 134890.0 132540.0 128820.0 138520.0 156240.0 126270.0 True False 135190.2935774188 140375.8002580274 153623.09812016448 144950.4050015084 145505.07558088689 131712.76869678346 141842.38276204502 138039.50645081114 127870.75448988433 125151.34603657352 1.0802144592029523 1.1216483458116764 1.227498568615239 1.158200927053145 1.1626329255649022 1.052427903238791 1.133366817489872 1.1029805976714886 1.021728958892029 1.0 16.933314282121838 -7.610900907443762 0.728737747958786 0.9959227871845231 1.1481245999589798 0.5371049583763967 0.044908903854708256 0.5261179724261618 0.595025812306508 0.04534090334752593 0.019323155764341335 2.449622106015771e-08 7.610900907443762 0.15220181277445666 QEPGGSHGS(ph)ETEDTGR ddPTM_KYSE-520_SHP099_60min_R1 4 QEPGGSHGSETEDTGR 16 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 QEPGGS(0.012)HGS(0.985)ET(0.003)EDTGR;QEPGGS(0.004)HGS(0.498)ET(0.498)EDTGR;QEPGGSHGS(1)ETEDTGR;QEPGGSHGS(0.981)ET(0.019)EDTGR 197.67 1.0997e-09 256020000.0 465923.0 462082.0 414222.0 404576.0 424935.0 409964.0 403406.0 410670.0 537849.0 409736.0 True False 440077.3223955263 439882.8871207772 440923.412898633 443026.78139979055 458374.9669505827 407405.2626075757 444186.2153431573 409245.481621099 440189.17966992967 406106.057809784 1.0836512135991185 1.0831724340512396 1.085734636111134 1.0909139937215608 1.1287075337479475 1.0031991761088188 1.0937689965491961 1.007730551541749 1.0839266521754518 1.0 18.631497022277603 -6.2594538242615165 24.99996584504469 1.04171098049427 1.0931311378725386 0.433689089701386 0.03222450212493722 185.28379215780626 2332909.660191481 0.010160616161698931 0.009711006506753973 5.502324200743496e-07 6.2594538242615165 0.05142015737826866 QEPLGS(ph)DSEGVNCLAYDEAIMAQQDR ddPTM_KYSE-520_SHP099_60min_R1 2 QEPLGSDSEGVNCLAYDEAIMAQQDR 26 0 J3KR44;F5H6Q1;F5GYJ8;Q96FW1;F5H3F0 J3KR44 OTUB1 Ubiquitin thioesterase OTUB1 1 QEPLGS(0.789)DS(0.211)EGVNCLAYDEAIMAQQDR;QEPLGS(0.758)DS(0.242)EGVNCLAYDEAIMAQQDR 164.06 9.6023e-12 176667000.0 81725.0 88812.0 78023.0 84133.0 71172.0 87850.0 70981.0 81281.0 101172.0 82818.0 True False 77191.5513352515 84545.33821047017 83052.4874212138 92128.97502449117 76772.83148671422 87301.69556369701 78156.45218780251 80999.05518212808 82801.71513857259 82084.29695142907 0.940393646557359 1.0299818765640076 1.0117950753766902 1.1223702759981697 0.9352925509265462 1.063561470415653 0.9521486458493913 0.986778935684335 1.008740017442898 1.0 16.324818634717822 -6.773889341247631 24.996852617504413 0.9858151623525154 1.0186193008342894 0.07279950943843416 0.05280480106294441 631.0944385961826 1267092.492824884 0.0213546930973236 0.014510922730529716 1.683102863057002e-07 6.773889341247631 0.03280413848177399 QEPQS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 QEPQSPSR 8 0 Q8WUQ7-2;Q8WUQ7;K7ENY9 Q8WUQ7-2 CACTIN Cactin 1 QEPQS(0.997)PS(0.003)R 84.81700000000001 0.011524 0.0 122750.0 114520.0 127230.0 104890.0 102300.0 123060.0 122230.0 91875.0 127890.0 131320.0 True False 115940.81280394152 109018.28730197561 135431.44937519773 114858.71406367162 110350.4279926216 122291.93689321072 134586.20124984285 91556.3070687861 104668.39984454245 130156.60696541403 0.8907793119925904 0.8375931874971555 1.0405268893586428 0.8824654909311869 0.8478280939049414 0.9395753296312253 1.0340328039252427 0.7034318825867594 0.8041727752810547 1.0 16.989889021632607 -7.261546644102229 24.99999999930188 0.8153517553403901 0.9217843170723673 0.14647925747941704 0.09424808047560922 15.629058784014168 3641437.803268388 0.04665427557186802 0.024685250422191753 5.47587285825923e-08 7.261546644102229 0.10643256173197724 QEPS(ph)PKPNNK ddPTM_KYSE-520_SHP099_60min_R1 12 QEPSPKPNNK 10 1 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK;QEPS(1)PKPNNK 174.05 5.2239e-05 63933720000.0 100489630.0 86488500.0 79358210.0 68871930.0 72557030.0 80672620.0 76384390.0 80953020.0 93732580.0 81648000.0 True False 94915269.90278903 82333462.63811481 84473767.19422545 75417497.52009921 78266855.46797149 80169112.25459112 84106069.58100703 80672212.868197 76713106.27805595 80924662.24118273 1.172884350383936 1.0174087893346206 1.043856901650886 0.9319470162918899 0.9671570235870731 0.9906635385843217 1.0393131988656639 0.9968804395842474 0.9479570770332668 1.0 26.27007610321889 -3.7302781248183847 1.2679374917916968 0.9864379025659917 1.5828908669519588 0.7394871223281062 0.032685181735553744 2.4881494661061287 1.3607394176410106 0.009938859652549897 2.684617908219055 0.00018608950265328213 3.7302781248183847 0.5964529643859671 QEPVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 QEPVSPK 7 0 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 QEPVS(1)PK;QEPVS(1)PK 111.61 0.0029361 3733200000.0 9617000.0 9164300.0 8031900.0 7139000.0 7824000.0 8532800.0 8176300.0 8290400.0 10300100.0 7981100.0 True False 9083525.838985797 8724033.272105252 8549649.125494387 7817488.413581391 8439704.287529536 8479543.630118558 9002840.19699819 8261642.537393916 8429861.484391049 7910393.6632018415 1.148302628887007 1.1028570313369308 1.0808120922307927 0.988255293784855 1.0669133101162815 1.0719496388105603 1.1381026760878252 1.0444034632342054 1.0656690227195273 1.0 22.91531806197636 -1.0000611417777978 0.009079863076899319 2.2810147547450162e-07 2.270623936447737 0.2807722976363859 0.04174547991513384 25212.057997918073 17.73358262058477 1937.2128929054902 2534.6208359315797 0.09998592257635064 1.0000611417777978 2.2706237083462617 QEQINTEPLEDTVLS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 9 QEQINTEPLEDTVLSPTK 18 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDTVLS(0.998)PT(0.002)K;QEQINTEPLEDT(0.003)VLS(0.997)PTK;QEQINTEPLEDTVLS(0.999)PT(0.001)K;QEQINTEPLEDTVLS(0.998)PT(0.002)K;QEQINTEPLEDTVLS(0.996)PT(0.004)K;QEQINTEPLEDTVLS(0.999)PT(0.001)K;QEQINTEPLEDTVLS(0.967)PT(0.033)K;QEQINTEPLEDTVLS(1)PTK;QEQINTEPLEDTVLS(0.998)PT(0.002)K 320.88 7.342199999999999e-48 5442700000.0 8215600.0 11455770.0 7771340.0 6304990.0 6976130.0 10554790.0 7541690.0 9409440.0 10295710.0 11270030.0 True False 7759864.290607432 10905417.613738654 8272293.010983631 6904214.353935639 7525111.742249923 10488913.640509443 8304077.625001455 9376800.848819803 8426268.597728157 11170186.302150669 0.6946942585114605 0.9762968422146158 0.7405689383525244 0.6180930350827117 0.6736782662972295 0.9390097315109189 0.743414424825002 0.8394489219051277 0.7543534521090121 1.0 23.413149912248294 -6.250621105912777 24.987016734311627 0.8382214370532718 0.7469418292488712 0.19378591244651777 0.11388503628476851 1618.5160281564638 3738296.9529984337 0.03902726318880659 0.03863257552762936 5.615376679968737e-07 6.250621105912777 -0.09127960780440059 QEQINTEPLEDTVLS(ph)PTKK ddPTM_KYSE-520_SHP099_60min_R1 1 QEQINTEPLEDTVLSPTKK 19 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 QEQINTEPLEDT(0.009)VLS(0.811)PT(0.18)KK 75.226 0.0057561999999999995 0.0 273680.0 376220.0 280270.0 250380.0 270500.0 302660.0 248280.0 340230.0 353740.0 276810.0 True False 258498.42483244606 358145.8264822671 298336.65264785534 274176.0399205082 291786.811065534 300770.98667397327 273378.565379293 339049.8215402788 289509.733059727 274357.67875492136 0.9421949697400593 1.305397494641264 1.087400411031885 0.9993379487855508 1.0635270439293292 1.0962732591955133 0.9964312521520384 1.2357949049537837 1.0552273746212173 1.0 18.065698429127835 -11.652129404436055 1.5887570396733377 5.4142316573945035e-05 1.0920271065109486 0.056855803364024515 0.10420243764131351 1259557.6713856482 52264.529838095754 4529954.207157234 0.02570050843169347 2.2277712531166488e-12 11.652129404436055 1.0919729641943747 QEQLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 QEQLSPK 7 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 QEQLS(1)PK;QEQLS(1)PK;QEQLS(1)PK 104.22 0.0042450000000000005 5138880000.0 7945530.0 7501020.0 6922280.0 6040490.0 6977170.0 6731500.0 6736450.0 7155430.0 8505400.0 7225500.0 True False 7504775.611878638 7140659.739939429 7368501.244839614 6614576.353460464 7526233.584333131 6689486.21157686 7417436.107416372 7130609.483419921 6961033.7636857685 7161487.691353944 1.0479352803942044 0.9970916725250173 1.0289065013315037 0.9236316026132718 1.0509315813555813 0.9340916999205444 1.0357395595850054 0.9956882970040845 0.9720094572095427 1.0 22.771827886142486 -3.676672644878468 1.1948719990974532 0.990960878997827 1.1841940374820397 0.15565219946770703 0.038954338223169106 9.856568180358652 4.471576317024385 0.01074162917731156 3.323413015118008 0.00021053647879530556 3.676672644878468 0.19323315848421263 QERLS(ph)PEVAPPAHR ddPTM_KYSE-520_SHP099_60min_R1 9 QERLSPEVAPPAHR 14 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR;QERLS(1)PEVAPPAHR 148.19 2.2198e-06 34063900000.0 13586580.0 13213910.0 13173470.0 12118380.0 12636930.0 11943060.0 11592740.0 11876920.0 15398960.0 11553990.0 True False 12832905.323224235 12579093.929116715 14022652.954497254 13270107.191676188 13631384.496703789 11868518.93248684 12764647.293439444 11835721.736613965 12602897.04019171 11451630.637468204 1.1206181660484826 1.0984543884920286 1.224511460282085 1.1587962982545186 1.1903444084289379 1.0364042736110115 1.1146576149317309 1.03354029756156 1.1005329668035848 1.0 23.449049707519755 -6.263297606972634 24.99980052334132 1.0627252089891157 1.158885351669171 0.5611973167534252 0.04474164974360886 138.22748821637043 1859645.008689546 0.015291271259922377 0.014161562583863384 5.453840002354611e-07 6.263297606972634 0.09616014268005535 QES(ph)DPEDDDVKKPALQSSVVATSK ddPTM_KYSE-520_SHP099_60min_R1 16 QESDPEDDDVKKPALQSSVVATSK 24 2 Q9H307 Q9H307 PNN Pinin 1 QES(0.945)DPEDDDVKKPALQS(0.04)S(0.015)VVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK;QES(1)DPEDDDVKKPALQSSVVATSK 259.46 1.4199999999999998e-37 235120560000.0 34956900.0 31629180.0 30876070.0 29687550.0 30995980.0 29770970.0 31769600.0 31814520.0 36522440.0 28808250.0 True False 33017771.072147533 30109666.71643294 32866390.87565874 32509045.82611263 33435187.282998372 29585158.333249383 34981181.20941674 31704162.855684772 29890885.551789176 28553031.31747938 1.1563665764599558 1.0545173428924386 1.1510648557842909 1.1385497205059096 1.1709855570581842 1.0361477212101877 1.2251302084343747 1.11036066549881 1.0468550683615439 1.0 24.767140580887006 -7.857748970295825 2.907073196088038 1.0031638866844763 1.1309706084697482 0.42405531783411077 0.05160328351795699 0.2251337784289557 3.6550146829165455 0.0468876519345451 0.012803090526221791 1.3875576293740155e-08 7.857748970295825 0.12780672178527186 QES(ph)PPAAAVRPFTPQPSK ddPTM_KYSE-520_SHP099_60min_R1 4 QESPPAAAVRPFTPQPSK 18 1 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 QES(1)PPAAAVRPFTPQPSK;QES(1)PPAAAVRPFTPQPSK;QES(1)PPAAAVRPFTPQPSK;QES(1)PPAAAVRPFTPQPSK 204.38 2.1718000000000001e-13 5555600000.0 4569000.0 3901900.0 3664930.0 3386690.0 3704890.0 4105100.0 4072160.0 4389710.0 4818910.0 4293460.0 True False 4315548.46192431 3714446.8671286968 3901177.2518953322 3708559.999354522 3996443.7650594693 4079478.5481904717 4483813.6732517425 4374483.120576014 3943917.4188354374 4255423.284661334 1.0141290708916542 0.8728736529025007 0.9167542194820241 0.8714902728295022 0.9391413022212488 0.9586539987443659 1.0536704279016476 1.02797837675604 0.9267979129247332 1.0 22.020871212471427 -6.398867901293909 2.896177745038088 1.0042922261709473 0.9161628830902064 0.3649184468950585 0.04829450220444054 0.27191418344405116 4.390915284335714 0.018495697754755267 0.015783645691998603 3.9914629163318573e-07 6.398867901293909 -0.08812934308074083 QES(ph)PPAAAVRPFTPQPSKDTLLPPFR ddPTM_KYSE-520_SHP099_60min_R1 2 QESPPAAAVRPFTPQPSKDTLLPPFR 26 2 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 QES(0.999)PPAAAVRPFT(0.001)PQPSKDTLLPPFR;QES(0.972)PPAAAVRPFT(0.026)PQPS(0.002)KDTLLPPFR 103.15 0.0013123 1073930000.0 694230.0 765080.0 839050.0 568040.0 679970.0 638220.0 511630.0 596110.0 916710.0 547080.0 True False 655719.6779868053 728324.4083915068 893136.5055274658 622026.350812546 733479.7704999305 634236.6322443117 563350.5534276131 594042.2335431197 750258.5723785323 542233.296821799 1.2092943790619017 1.3431938109674317 1.6471443394613012 1.1471563152953521 1.3527014567329 1.1696748170239146 1.0389449647035491 1.0955473170404497 1.3836453363820245 1.0 19.048554181645546 -6.062037086392919 1.5301378787408022 1.134590579320606 1.3707476458795222 0.29053909773886066 0.15602547919535437 0.5092891618085122 2.416134117582359 0.06458436736364082 0.06845835053514293 8.668878450778266e-07 6.062037086392919 0.23615706655891633 QESDKNGESAS(ph)PERDR ddPTM_KYSE-520_SHP099_60min_R1 3 QESDKNGESASPERDR 16 2 Q14676;Q14676-3 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 QES(0.005)DKNGES(0.382)AS(0.613)PERDR;QESDKNGES(0.061)AS(0.939)PERDR;QESDKNGES(0.341)AS(0.659)PERDR 172.42 2.3848e-08 1179080000.0 1057130.0 1004240.0 1027050.0 850960.0 907330.0 854490.0 838640.0 904690.0 1259580.0 862030.0 True False 998488.8915635896 955994.8030050286 1093255.286338102 931834.982549546 978731.7089984867 849156.8109530288 923417.9155376609 901551.8415462344 1030872.0234278581 854393.0848491908 1.1686528241738205 1.1189168310904243 1.279569446106967 1.0906396588100014 1.1455285937517192 0.9938713526724222 1.0807881429665993 1.0551956207667197 1.2065547365821878 1.0 19.704540444853954 -5.637728491599578 2.264454931052879 1.0754004359206955 1.1803509774008663 0.3033246435319439 0.07107865236256553 0.38064347284706507 3.975252392892972 0.02243657865352561 0.03127552709145364 2.3028810623810942e-06 5.637728491599578 0.1049505414801708 QETELS(ph)PEMISSGSWR ddPTM_KYSE-520_SHP099_60min_R1 1 QETELSPEMISSGSWR 16 0 K7EPH2;K7ER00;Q9Y285;K7ER16 K7EPH2 FARSA Phenylalanine--tRNA ligase alpha subunit 1 QETELS(1)PEMISSGSWR 118.21 0.00016156 279420000.0 130450.0 174160.0 107200.0 138430.0 172520.0 152080.0 108130.0 125540.0 189180.0 141000.0 True False 123213.67845437213 165793.0921805104 114110.28352606451 151586.3455795028 186096.3424954745 151130.81230878847 119060.83564710389 125104.53104125622 154829.68083971014 139750.8496963399 0.8816667571045125 1.1863476504132666 0.8165265812265976 1.0846899744000118 1.3316294169218807 1.081430364374712 0.8519507101803483 0.8951969259084422 1.10789795680051 1.0 17.092497529233142 -10.063062446869377 5.509183101129556 0.9999998054951701 1.0282288422181283 0.002426922434878409 0.1563613309468006 3.866253273677717e-07 6.570372036722306e-08 0.1567192561298401 0.038009740500823654 8.648435546455427e-11 10.063062446869377 0.02822903672295818 QETHCQS(ph)TPLKK ddPTM_KYSE-520_SHP099_60min_R1 1 QETHCQSTPLKK 12 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 QETHCQS(0.719)T(0.281)PLKK 202.25 2.7931e-08 882140000.0 1199800.0 1164600.0 1152400.0 1210900.0 1001000.0 1006600.0 1071500.0 1047400.0 1231500.0 1099300.0 True False 1133244.7022579957 1108650.8678997618 1226685.5479051918 1325983.5719296394 1079773.005089093 1000317.4360206896 1179817.676832256 1043766.8138649969 1007890.6435886632 1089561.0572424587 1.0400928839418093 1.0175206433181605 1.1258529659730845 1.2169887709510618 0.991016517992908 0.9180921338656932 1.0828375968375974 0.9579700072124813 0.9250428297607359 1.0 20.055315614344064 -5.963679031418776 24.964790479433145 0.9778746080675271 1.097046659445351 0.45008689799640655 0.0656141214448559 171.2790113981336 117725.91925328174 0.021476740489380218 0.024352270812447282 1.0872288513694583e-06 5.963679031418776 0.11917205137782383 QETHCQST(ph)PLKK ddPTM_KYSE-520_SHP099_60min_R1 3 QETHCQSTPLKK 12 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 QETHCQS(0.146)T(0.854)PLKK;QETHCQS(0.239)T(0.761)PLKK;QETHCQS(0.212)T(0.788)PLKK 173.03 1.2282e-06 6201680000.0 4908670.0 4627940.0 4564120.0 5285400.0 4089340.0 4392310.0 4219340.0 4296980.0 5272660.0 4604450.0 True False 4636376.28990895 4405606.815720438 4858330.478050197 5787722.826886544 4411147.792838186 4364895.964045331 4645872.06399012 4282074.779302674 4315277.856942104 4563658.155207892 1.015934176537319 0.9653674017395253 1.0645693241738614 1.2682200616366919 0.9665815542744659 0.9564467397857702 1.018014913910326 0.9382987580733048 0.9455742981138181 1.0 22.12175929866838 QETVADFT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 QETVADFTPK 10 0 O75400-3;O75400;O75400-2;F5H578 O75400-3 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 QETVADFT(1)PK;QETVADFT(1)PK;QETVADFT(1)PK;QETVADFT(1)PK;QETVADFT(1)PK;QETVADFT(1)PK;QETVADFT(1)PK;QETVADFT(1)PK 187.6 1.7627e-05 16915500000.0 29883400.0 28934600.0 22031600.0 20523500.0 22107200.0 29105500.0 23651400.0 30212700.0 29916200.0 28039600.0 True False 28225708.230918985 27544538.38427998 23451792.187806387 22474047.269384723 23846910.867238328 28923841.778362926 26042314.327419866 30107899.195397213 24484172.206030972 27791190.958478726 1.0156350720301783 0.9911247929400631 0.843857041709526 0.8086752130544512 0.8580744489455912 1.0407557496034059 0.937070828174591 1.08336124350985 0.8810047846676097 1.0 24.72812432505714 -6.258121646413724 24.98617138342873 0.9904381179886377 0.8997642642641631 0.2274021832399019 0.07811234962267047 462.01994309023127 3479526.455026809 0.02771941303577682 0.02663304034815708 5.519228233721739e-07 6.258121646413724 -0.09067385372447456 QETVADFT(ph)PKKEEEESQPAKK ddPTM_KYSE-520_SHP099_60min_R1 1 QETVADFTPKKEEEESQPAKK 21 3 O75400-3;O75400;O75400-2;F5H578 O75400-3 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 QETVADFT(0.999)PKKEEEES(0.001)QPAKK 112.99 8.8748e-05 1096400000.0 907700.0 1100100.0 1158100.0 666580.0 802520.0 797920.0 607780.0 631380.0 1413900.0 750260.0 True False 857348.0715449101 1047249.5447162349 1232752.9790255171 729931.5627854152 865673.7582858128 792939.8853066046 669220.3337611837 629189.8901451997 1157171.4015184818 743613.2800934473 1.1529488438361 1.4083255002985298 1.657787739980385 0.9816010315115502 1.164145102649359 1.0663336797951732 0.8999574801529702 0.846125139220391 1.5561467667348061 1.0 19.504193009828523 -5.280495119380985 24.668490100066606 1.0633120284962778 1.4065512051414193 0.33281511705329303 0.21564778078559124 740.4636348195837 958560.8599279553 0.060344491495990436 0.08967312640894524 5.242094920629092e-06 5.280495119380985 0.3432391766451415 QEVPSWLENMAYEHHYK ddPTM_KYSE-520_SHP099_60min_R1 2 QEVPSWLENMAYEHHYK 17 0 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;A0A2R8Y7T2;O15523-2;O15523;A0A087WVZ1;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A0D9SG12;A0A2R8Y5G6 DDX3X;DDX3Y ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y 0 ; 199.49 1.4163e-12 2528600000.0 3112900.0 2373700.0 1625210.0 1688520.0 3037400.0 2617300.0 2218700.0 1956510.0 2062540.0 1804130.0 False True 2940221.2315876978 2259663.88900366 1729973.6370279412 1848996.4331279495 3276426.0995580517 2600964.4598618625 2442987.8484253134 1949723.3234628653 1688034.7284022404 1788146.8117919003 1.644284021982124 1.2636903603788847 0.9674673385986334 1.0340294325582091 1.8323026263569198 1.4545586764519847 1.3662121210154985 1.0903597571549783 0.9440134989311433 1.0 20.770033759955588 -7.387213164860048 3.326279161713713 0.9804219435736493 1.3558590123606793 0.3165201258606498 0.2420514262601845 0.36095267167796474 7.335344744435862 0.17168387726122256 0.07177490421129229 4.100028118166979e-08 7.387213164860048 0.37543706878703 QEYDESGPSIVHR ddPTM_KYSE-520_SHP099_60min_R1 7 QEYDESGPSIVHR 13 0 P60709;Q6S8J3;A5A3E0;P0CG38;P0CG39;A0A2R8YFE2;Q9BYX7;P63261 P60709;P63261 ACTB;POTEE;POTEF;POTEI;POTEJ;POTEKP;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;;;;;; 171.21 1.0228e-06 4219120000.0 4395970.0 5363940.0 4319920.0 5568960.0 4477960.0 4507320.0 3596070.0 3604810.0 3981460.0 3872860.0 False True 4152116.780951063 5106248.270961912 4598388.955316386 6098232.2840311285 4830349.975892862 4479188.143974543 3959595.8498611026 3592305.7554789768 3258527.2284389082 3838549.473439482 1.081689010310088 1.3302546460047382 1.1979496388243915 1.5886814345437854 1.258378981257389 1.1668960306407161 1.0315344057069449 0.9358497996015506 0.8488954619410304 1.0 21.872129811828273 -6.720596592962492 1.7809134916945548 0.9216014888835765 1.3033326987668452 0.6231782713242462 0.12529775160272202 0.23272308082674492 1.5110230441252286 0.0665119017174475 0.0427697882771737 1.9028449720683786e-07 6.720596592962492 0.3817312098832687 QFAEMYVAK ddPTM_KYSE-520_SHP099_60min_R1 1 QFAEMYVAK 9 0 P13639 P13639 EEF2 Elongation factor 2 0 98.04799999999999 0.023019 0.0 175620.0 272630.0 179790.0 185690.0 227060.0 223590.0 205570.0 231420.0 338370.0 214270.0 False True 165878.00851020953 259532.4455740269 191379.55107417086 203337.92177026588 244928.33020532408 222194.49187350052 226351.02176986166 230617.25803383393 276930.5376135574 212371.73449953742 0.7810738510052092 1.222066798039888 0.9011535905433202 0.9574622642200475 1.1533000414697727 1.0462526587971361 1.0658246131636444 1.085913144596633 1.3039896211525297 1.0 17.69623223864422 -5.76239433567007 0.6140983712077565 1.1310871380333942 0.9510922745395561 0.19556360938922857 0.13054605034620115 1.7570437825753065 1.3881592980716577 0.08935136339776925 0.17364374602910682 1.7282464136323124e-06 5.76239433567007 -0.1799948634938381 QFAPIHAEAPEFMEMSVEQEILVTGIK ddPTM_KYSE-520_SHP099_60min_R1 2 QFAPIHAEAPEFMEMSVEQEILVTGIK 27 0 F8W079;H0YH81;P06576 F8W079 ATP5B ATP synthase subunit beta;ATP synthase subunit beta, mitochondrial 0 ; 102.27 2.2584e-06 8538500.0 34930.5 31590.2 25784.3 37107.4 28321.9 24104.8 26639.7 27764.8 30547.7 21495.4 False True 32992.835532774596 30072.559374143075 27446.39723433866 40634.07613925338 30550.672400432322 23954.35300197843 29332.7008544174 27668.490389153023 25001.007724850522 21304.967479168146 1.5485982583655558 1.4115280581182685 1.2882628082476804 1.9072583039136346 1.4339694454030294 1.1243552953272908 1.3768010152138799 1.2986872857800458 1.1734825574972756 1.0 14.37890222887461 -6.067249278160119 6.518576544301411 1.228510511457283 1.5306903784678507 0.46082603926738197 0.17563916877044827 0.2503954193852886 19.827673891639996 0.05865816121124706 0.059129451854386596 8.565460602213114e-07 6.067249278160119 0.30217986701056776 QFCQEGQPHVLEALS(ph)PPQTSGLS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 3 QFCQEGQPHVLEALSPPQTSGLSPSR 26 0 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 2 QFCQEGQPHVLEALS(0.92)PPQT(0.074)S(0.006)GLS(0.943)PS(0.057)R;QFCQEGQPHVLEALS(0.999)PPQT(0.001)S(0.004)GLS(0.967)PS(0.029)R;QFCQEGQPHVLEALS(0.957)PPQT(0.042)S(0.003)GLS(0.951)PS(0.047)R 162.69 2.9886000000000004e-10 2885600000.0 918640.0 970970.0 1078810.0 996900.0 1079850.0 1146320.0 995940.0 1198530.0 1371490.0 1204350.0 True False 867681.2079365604 924323.1437443177 1148351.8187570313 1091645.0762710865 1164828.051493962 1139165.3916741856 1096619.3346377206 1194372.5791690045 1122461.9884493826 1193680.395970121 0.7268957510451393 0.7743472598401074 0.9620262028545333 0.9145204025771831 0.9758290874395149 0.9543303178304857 0.9186875635554712 1.0005798731395943 0.9403371222639053 1.0 20.186985180741573 -4.707503148697726 4.136521663152145 0.9565018570170147 0.7380637440597388 0.8953854688013614 0.02852873409146094 0.05568954910070403 1.920663729899451 0.00712957485592591 0.02005645791254914 1.9610869572607934e-05 4.707503148697726 -0.2184381129572759 QFCQEGQPHVLEALSPPQT(ph)SGLSPSR ddPTM_KYSE-520_SHP099_60min_R1 1 QFCQEGQPHVLEALSPPQTSGLSPSR 26 0 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 QFCQEGQPHVLEALSPPQT(0.386)S(0.31)GLS(0.251)PS(0.053)R 66.501 0.032438 230550000.0 149460.0 185000.0 136510.0 142820.0 147750.0 145420.0 114020.0 135360.0 163320.0 148490.0 True False 141169.15585887674 176112.32230933878 145309.65302372264 156393.56985960144 159377.084417496 144512.37983918985 125546.25432796427 134890.46775326162 133665.20496216038 147174.49412347193 0.9591957947580441 1.1966225762025686 0.9873290469870086 1.062640444535146 1.0829123984199782 0.9819118502826399 0.8530435594542444 0.9165342714892932 0.9082090328098703 1.0 17.167168143182682 -6.492676241801972 4.392992632462004 0.9122307962090276 1.0606332988178266 0.478193754675993 0.06789179900621888 0.16374070366629662 7.391671188660464 0.024103349256848094 0.02004180899481105 3.2160571540756504e-07 6.492676241801972 0.14840250260879906 QFCQEGQPHVLEALSPPQTSGLS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 5 QFCQEGQPHVLEALSPPQTSGLSPSR 26 0 E9PR76;E9PSH4;Q9H063 E9PR76 MAF1 Repressor of RNA polymerase III transcription MAF1 homolog 1 QFCQEGQPHVLEALSPPQT(0.01)S(0.08)GLS(0.678)PS(0.232)R;QFCQEGQPHVLEALSPPQT(0.001)S(0.005)GLS(0.986)PS(0.007)R;QFCQEGQPHVLEALSPPQTSGLS(0.989)PS(0.011)R;QFCQEGQPHVLEALSPPQTSGLS(0.942)PS(0.058)R;QFCQEGQPHVLEALSPPQT(0.001)S(0.006)GLS(0.875)PS(0.117)R 221.23 7.1095e-22 8139340000.0 3501630.0 3231310.0 2906240.0 2391100.0 2267240.0 2905360.0 2216341.0 2854770.0 3455200.0 2749820.0 True False 3307387.6035736524 3076073.0173048107 3093580.8805484073 2618349.4250895684 2445658.8891690243 2887226.570551427 2440390.377683691 2844867.4691783274 2827822.7785039 2725458.7341275862 1.21351593482568 1.1286441356777523 1.1350679582160896 0.9607004473423798 0.8973384401477187 1.059354351764061 0.8954053668564735 1.0438123437920859 1.0375584642300886 1.0 21.378067646095 -5.188132699145708 4.467235929892566 0.9824031668150287 1.1615253859432977 0.6642793385044381 0.056908108234631154 0.13404491750439357 5.094457903424671 0.015735620055363945 0.02797246691009702 6.484362728755862e-06 5.188132699145708 0.17912221912826898 QFEDELHPDLK ddPTM_KYSE-520_SHP099_60min_R1 2 QFEDELHPDLK 11 0 Q9Y3C6 Q9Y3C6 PPIL1 Peptidyl-prolyl cis-trans isomerase-like 1 0 ; 120.14 0.00038815 276510000.0 700900.0 681870.0 446560.0 411830.0 647350.0 694440.0 483980.0 554290.0 561900.0 563560.0 False True 662019.6797904893 649111.9416922635 475345.972121263 450970.1993787959 698292.7620823416 690105.7423705609 532905.4215896173 552367.2973622582 459873.12434630096 558567.2968430457 1.185210239718909 1.162101586256419 0.8510093140215341 0.8073695003764533 1.2501497420794363 1.2354925651232258 0.9540576840096685 0.9889001745790897 0.8233083586265214 1.0 19.091371583207724 -6.965325507321957 24.967382108459514 0.9379580587728448 1.072257524443997 0.17718658707499202 0.14758959388268503 369.32386569654045 265931.12832735287 0.06815311080089075 0.04594858980106965 1.0831148061735555e-07 6.965325507321957 0.13429946567115214 QFENPIIK ddPTM_KYSE-520_SHP099_60min_R1 1 QFENPIIK 8 0 C9J494;Q9H000-2;Q9H000 C9J494 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 0 87.181 0.018501 0.0 420640.0 360160.0 276590.0 244620.0 363650.0 350320.0 249550.0 324390.0 335020.0 329510.0 False True 397306.2606749493 342857.37298881885 294419.4339596469 267868.6112523153 392267.1861145339 348133.52293539443 274776.9493732987 323264.7668031948 274188.81316692964 326590.7977549011 1.2165261954904147 1.0498072062830301 0.9014933549370914 0.8201964448898665 1.2010968735528227 1.065962437792447 0.8413493315249883 0.9898159073232602 0.8395484963195504 1.0 18.31712461554951 -4.37859737996875 3.0805295437591753 0.9609735673433337 1.227525716774793 0.3344254803148162 0.11146008443804821 0.36019016901682305 5.4847996351893755 0.02980755064125619 0.1970659111953587 4.1821790295015496e-05 4.37859737996875 0.26655214943145933 QFGFIVLTTSAGIMDHEEAR ddPTM_KYSE-520_SHP099_60min_R1 2 QFGFIVLTTSAGIMDHEEAR 20 0 P62244 P62244 RPS15A 40S ribosomal protein S15a 0 ; 172.55 7.6649e-12 40488000.0 94593.0 109826.0 96201.0 146070.0 103312.0 85855.0 87484.0 97932.0 100875.0 58293.0 False True 89345.73772352957 104549.79410781318 102402.27038704221 159952.44888245306 111442.06663512923 85319.14709870468 96327.73648156131 97592.29674950073 82558.64285181186 57776.56937126777 1.5464008800765026 1.8095535135702554 1.772384056398592 2.7684656708260227 1.9288453407299269 1.4767084308943723 1.66724569370962 1.6891327714939282 1.4289294734911726 1.0 15.818196922358238 -6.227968511403525 6.023893333049373 1.5083538981955902 1.993064172704206 0.3457787918254017 0.3477618195887646 0.2579339100466217 29.240998764467108 0.12171000195764903 0.11937211900969337 5.916045270089649e-07 6.227968511403525 0.4847102745086158 QFIHIQPFNLDNEQPDYDMDS(ph)EDETLLNR ddPTM_KYSE-520_SHP099_60min_R1 1 QFIHIQPFNLDNEQPDYDMDSEDETLLNR 29 0 C9J1X4;E7ETK1;Q52LR7 C9J1X4 EPC2 Enhancer of polycomb homolog;Enhancer of polycomb homolog 2 1 QFIHIQPFNLDNEQPDYDMDS(1)EDETLLNR 218.71 1.3718000000000002e-22 110410000.0 65709.0 55124.0 51270.0 43297.0 58633.0 63393.0 51876.0 55741.0 93658.0 55652.0 True False 62063.99078235596 52475.7602971891 54574.94623490044 47411.933862282305 63247.08352386488 62997.34077256065 57120.132340970704 55547.647481047214 76652.06812604702 55158.96657660084 1.1251840749439335 0.9513550299082292 0.9894120506973357 0.8595508002572889 1.1466328586129662 1.1421051677078546 1.035554795277869 1.0070465588565116 1.3896574371022359 1.0 15.751307807235653 -5.789075379564378 24.99966176017647 1.1173848880903021 0.9798051226364513 0.2418510916512786 0.12031071972232775 316.9866179876526 286746.0040942706 0.03658189996195039 0.04148916551980654 1.6252666372136506e-06 5.789075379564378 -0.13757976545385087 QFLIS(ph)PPAS(ph)PPVGWK ddPTM_KYSE-520_SHP099_60min_R1 4 QFLISPPASPPVGWK 15 0 H0YF64;V9GYW9;E9PD55;E9PDJ2;Q9UKA8-6;P53805-4;P53805-3;Q9UKA8-5;P53805-2;Q9UKA8-2;Q9UKA8;P53805 H0YF64 RCAN3;RCAN1 Calcipressin-3;Calcipressin-1 2 QFLIS(1)PPAS(1)PPVGWK;QFLIS(1)PPAS(1)PPVGWK;QFLIS(1)PPAS(1)PPVGWK;QFLIS(1)PPAS(1)PPVGWK 147.92 7.2093e-06 1608573000.0 3561630.0 2938470.0 3178460.0 2825100.0 2876090.0 3166350.0 3111500.0 2992310.0 3781720.0 2961740.0 True False 3364059.2839666163 2797301.4904666054 3383348.6173158074 3093596.6546027106 3102421.9202863974 3146587.6351521043 3426040.785313635 2981930.375020405 3095054.977403261 2935501.2877988513 1.145991418211611 0.9529212274896076 1.1525624708046946 1.0538563438759059 1.0568627352273143 1.071908109265908 1.1671058703171644 1.015816408398297 1.054353132212062 1.0 21.485175458917766 QFLISPPAS(ph)PPVGWK ddPTM_KYSE-520_SHP099_60min_R1 2 QFLISPPASPPVGWK 15 0 H0YF64;V9GYW9;E9PD55;E9PDJ2;Q9UKA8-6;P53805-4;P53805-3;Q9UKA8-5;P53805-2;Q9UKA8-2;Q9UKA8;P53805 H0YF64 RCAN3;RCAN1 Calcipressin-3;Calcipressin-1 1 QFLIS(0.004)PPAS(0.996)PPVGWK;QFLIS(0.003)PPAS(0.997)PPVGWK 177.67 1.3517e-08 1491280000.0 1580360.0 1856260.0 1269220.0 1064850.0 1256300.0 1621540.0 1127390.0 1371420.0 1545430.0 1445320.0 True False 1492694.2804304454 1767082.4832969338 1351035.9520238019 1166053.0238411732 1355163.662630796 1611419.3673802787 1241357.5834660898 1366662.8641118344 1264818.869119958 1432515.5892419445 1.0420091003828769 1.233552009184092 0.9431212910839876 0.8139897622044188 0.9460027330996925 1.1248878403012745 0.8665578181407357 0.9540300115233246 0.8829355007503075 1.0 20.450119408410835 -4.781080069641669 24.39905690142602 0.9392871824724611 1.1377804841697339 0.4323878374298554 0.08995536198274434 142.86991771401813 177483.44521359142 0.023646351983768125 0.04934547050441815 1.6554647219973902e-05 4.781080069641669 0.19849330169727275 QFS(ph)APNLK ddPTM_KYSE-520_SHP099_60min_R1 2 QFSAPNLK 8 0 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 QFS(1)APNLK;QFS(1)APNLK 131.83 0.00078445 1888300000.0 2348390.0 2182250.0 2085880.0 2046340.0 2218170.0 2011960.0 2284820.0 2433000.0 2587500.0 2186510.0 True False 2218120.1253005965 2077411.4343759674 2220339.162326001 2240823.5383454445 2392727.3593391352 1999402.6113413319 2515791.903294332 2424560.4908664688 2117675.225566922 2167139.2224790407 1.0235245166959035 0.9585962050004191 1.0245484643049854 1.0340007301340404 1.104094898251179 0.922599983703017 1.160881533220768 1.1187839090895868 0.9771754410611722 1.0 21.047360408094118 -5.119934687135284 2.724871414055435 1.0529182338228318 0.9913322417235086 0.08083807303356816 0.06836982260694925 0.6115932475205285 8.770704357903842 0.019415274049042593 0.039528515229444255 7.586916648974033e-06 5.119934687135284 -0.06158599209932314 QFS(ph)DKRR ddPTM_KYSE-520_SHP099_60min_R1 3 QFSDKRR 7 2 Q02241-2;Q02241-3;Q02241;A0A2U3TZL8;H7BYN4 Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 QFS(1)DKRR;QFS(1)DKRR;QFS(1)DKRR 69.27600000000001 0.022122 5542300000.0 5345100.0 5297800.0 6082800.0 5384400.0 5279700.0 5174700.0 4784100.0 5847000.0 7675600.0 4470900.0 True False 5048596.647807317 5043285.735840082 6474907.020824108 5896131.757121105 5695182.352616267 5142402.777842496 5267723.516316562 5826718.121700062 6281904.5261300355 4431291.304307568 1.139305972256818 1.138107470149301 1.461178373565733 1.330567401738991 1.2852195808206281 1.1604750003331243 1.1887558624719425 1.3149029755809618 1.4176239147319256 1.0 22.079295739178043 QFTPCQLLADHANS(ph)PNKK ddPTM_KYSE-520_SHP099_60min_R1 3 QFTPCQLLADHANSPNKK 18 1 A0A2R8Y4F5;H0YFD6;P40939 A0A2R8Y4F5 HADHA Trifunctional enzyme subunit alpha, mitochondrial;Long-chain enoyl-CoA hydratase;Long chain 3-hydroxyacyl-CoA dehydrogenase 1 QFTPCQLLADHANS(1)PNKK;QFTPCQLLADHANS(1)PNKK;QFTPCQLLADHANS(1)PNKK 210.26 2.4534e-18 4019400000.0 1571100.0 1694050.0 1520470.0 1414700.0 1459590.0 1605100.0 1496460.0 1617050.0 2076970.0 1596640.0 True False 1483947.9510897978 1612665.295179109 1618481.9290380143 1549152.6626549358 1574451.4290689183 1595081.9755183859 1647736.7808421815 1611440.8309723083 1699844.6041529395 1582495.0117671243 0.9377267795825265 1.0190650101186067 1.022740619719682 0.9789305186656126 0.9949171513095488 1.007953872623716 1.0412271562247792 1.0182912546263645 1.0741547944942806 1.0 20.59376952142002 -6.5866201116179335 3.17342923690856 1.0350352499729616 0.9936327903728166 0.3338351621114396 0.02818174168378109 0.3085125567368781 6.318527580883355 0.011304381213593362 0.008626951194610395 2.5904778810049633e-07 6.5866201116179335 -0.04140245960014499 QGAEGAPS(ph)PNYDDDDDERADDTLFMMK ddPTM_KYSE-520_SHP099_60min_R1 3 QGAEGAPSPNYDDDDDERADDTLFMMK 27 1 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 QGAEGAPS(0.944)PNY(0.056)DDDDDERADDTLFMMK;QGAEGAPS(1)PNYDDDDDERADDTLFMMK;QGAEGAPS(1)PNYDDDDDERADDTLFMMK 200.58 6.5612e-16 380610000.0 1039000.0 1046820.0 855820.0 924250.0 841750.0 944190.0 810300.0 944150.0 1185140.0 1014970.0 True False 981364.5988048508 996529.1958911449 910987.5265604145 1012090.4421141052 907990.9360976466 938296.9599805019 892213.0317659129 940874.9640162656 969948.4509481678 1005978.15543471 0.9755327126171811 0.9906071921218986 0.90557386523642 1.0060759636244327 0.9025950824004518 0.9327210088126007 0.8869109403080069 0.9352836927256024 0.9641844066972083 1.0 19.940167547043973 -4.583449668967965 1.0891691190707513 0.9361087416495926 0.995009205177247 0.08334731202154844 0.03931583367805889 2.1444582448903295 3.0728528847770566 0.012592388387790691 0.12918064992518455 2.6094581194653142e-05 4.583449668967965 0.058900463527654434 QGAIYHGLATLLNQPS(ph)PMMQR ddPTM_KYSE-520_SHP099_60min_R1 7 QGAIYHGLATLLNQPSPMMQR 21 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR;QGAIYHGLATLLNQPS(1)PMMQR 178.53 1.5759e-12 3961644000.0 1470626.0 1611360.0 1692850.0 1185874.0 1521400.0 1665832.0 1176321.0 1452020.0 1908860.0 1235530.0 True False 1389047.4441597492 1533947.8468993302 1801973.819655768 1298579.1084139817 1641125.5244181287 1655434.924578995 1295235.0064666306 1446983.2815240151 1562259.1424447072 1224584.1654277951 1.134301327238296 1.2526275369267592 1.471498546632169 1.060424546613615 1.3401492284075218 1.3518343379858149 1.0576937404822269 1.1816119482637009 1.2757466465352743 1.0 20.223860502778894 -10.448651451996419 0.2877898173562946 0.8174222647081867 1.2670896438806265 0.24242946592715964 0.12544307912694716 30.397702904916777 1.7326150834100376 4.223949505498505 0.1503664046516694 3.559168491137194e-11 10.448651451996419 0.4496673791724398 QGDDS(ph)S(ph)DEEDKER ddPTM_KYSE-520_SHP099_60min_R1 3 QGDDSSDEEDKER 13 1 H3BMK2;A0A087WWW0;Q12846 H3BMK2 STX4 Syntaxin-4 2 QGDDS(1)S(1)DEEDKER;QGDDS(1)S(1)DEEDKER;QGDDS(1)S(1)DEEDKER 141.86 0.0042816 402280000.0 1318940.0 1536660.0 1263200.0 1584100.0 1590150.0 1520990.0 1487560.0 1697630.0 2154010.0 1343270.0 True False 1245775.7689582948 1462836.5470263162 1344627.8931914605 1734652.3877229686 1715285.7582841362 1511496.9372274056 1637937.0819865514 1691741.3177598198 1762896.0821732965 1331369.6728482472 0.9357098891197977 1.0987455827327184 1.0099583313437277 1.302908142718892 1.2883617475036542 1.1352947029308589 1.2302646780908366 1.2706773725291614 1.32412215639693 1.0 20.344479780044736 -5.251655661268176 24.892865090094226 1.2324785377475593 1.0231986786677805 0.48328105333587634 0.09745448870651598 532.1884488632918 1354052.8266152753 0.025405113586878917 0.04333102944355489 5.602015920640351e-06 5.251655661268176 -0.20927985907977886 QGDETPS(ph)TNNGSDDEKTGLK ddPTM_KYSE-520_SHP099_60min_R1 1 QGDETPSTNNGSDDEKTGLK 20 1 Q9Y3P9;Q9Y3P9-3;C9JGR5;B5MCD9;Q9Y3P9-4 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 QGDET(0.009)PS(0.36)T(0.36)NNGS(0.271)DDEKTGLK 98.74 0.00063643 2575900000.0 670740.0 601520.0 496750.0 521350.0 591740.0 559350.0 601130.0 594480.0 681360.0 606530.0 True False 633532.7151129598 572622.0763000725 528771.2998281019 570898.9472504075 638306.5714599598 555858.8891696531 661898.0868634379 592417.8876326757 557642.1996878366 601156.616073199 1.0538563465395159 0.9525339337367419 0.8795899199813794 0.9496675774435673 1.0617974657410032 0.9246490420425976 1.101041008559478 0.985463474564074 0.9276155078029384 1.0 19.19738137185731 QGDETPSTNNGS(ph)DDEKTGLK ddPTM_KYSE-520_SHP099_60min_R1 3 QGDETPSTNNGSDDEKTGLK 20 1 Q9Y3P9;Q9Y3P9-3;C9JGR5;B5MCD9;Q9Y3P9-4 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 QGDETPSTNNGS(1)DDEKTGLK;QGDETPS(0.131)T(0.131)NNGS(0.738)DDEKTGLK;QGDETPS(0.055)T(0.033)NNGS(0.912)DDEKTGLK 229.6 9.640799999999999e-20 5978100000.0 1943290.0 1712230.0 1471360.0 1517470.0 1884100.0 1558740.0 1626060.0 1895090.0 2180920.0 1475610.0 True False 1835491.8298474266 1629971.9006903716 1566206.2198592385 1661689.8925560066 2032367.9509374218 1549011.3254747547 1790438.0136162927 1888516.3751073326 1784919.9045191922 1462537.2434072096 1.2550051891816176 1.1144823203907592 1.0708829651479614 1.1361692839252693 1.3896179123635184 1.0591260718025137 1.224199945462713 1.2912603652456316 1.220426975494273 1.0 20.48004193261492 -5.606200120295719 19.24312652607919 1.2115549628225166 1.136539194347632 0.04128316614055905 0.11185897183897875 10.848716388555134 2498.712599343341 0.03187575368922759 0.04115137196962887 2.4762807393660673e-06 5.606200120295719 -0.07501576847488467 QGDTGDWIGTFLGHK ddPTM_KYSE-520_SHP099_60min_R1 4 QGDTGDWIGTFLGHK 15 0 Q9Y3F4-2;Q9Y3F4 Q9Y3F4-2 STRAP Serine-threonine kinase receptor-associated protein 0 ;;; 213.69 7.0447e-14 1338426000.0 2566034.0 2575660.0 1950139.0 1809424.0 3036324.0 2602881.0 1857220.0 1908437.0 1994826.0 2022697.0 False True 2423690.978758038 2451921.4274555217 2075848.0802727244 1981391.1129368371 3275265.424479654 2586635.4541893173 2044965.9223204874 1901817.0774795446 1632615.8838712145 2004777.4782144544 1.2089576050688113 1.2230391921797295 1.035450618749752 0.9883346827606792 1.6337301571228513 1.2902356906428798 1.0200463365848595 0.9486424793505707 0.8143626420450892 1.0 20.93501068186852 -6.93250615669749 3.934698375025596 0.9207031741996775 1.2272676872648938 0.4143945836697247 0.16817087753306398 0.24502551321287827 7.571098471915358 0.08231668779136728 0.05264442732662087 1.1681371698577825e-07 6.93250615669749 0.30656451306521626 QGEVPES(ph)PEAR ddPTM_KYSE-520_SHP099_60min_R1 2 QGEVPESPEAR 11 0 H7BYP4;U5Y3L1;Q9H930-3;Q9H930-1;Q9H930-2;Q9H930 H7BYP4 SP140L Nuclear body protein SP140-like protein 1 QGEVPES(1)PEAR;QGEVPES(1)PEAR 125.28 0.00085647 616570000.0 1194300.0 1118570.0 1145770.0 978150.0 1001580.0 1107710.0 1029570.0 1058320.0 1368650.0 1137200.0 True False 1128049.7982219763 1064832.2181921997 1219628.167496819 1071113.0819084798 1080398.647789344 1100796.37100584 1133648.98323489 1054648.9349337455 1120137.6608588092 1127125.292728211 1.000820233118474 0.9447327861969713 1.082069735605617 0.9503052489540418 0.9585435219666085 0.9766406433319921 1.005787901796515 0.9356980468258004 0.9938004834826408 1.0 20.104216465624514 QGGS(ph)PDEPDSK ddPTM_KYSE-520_SHP099_60min_R1 1 QGGSPDEPDSK 11 0 V9GZ50;Q9ULX6-2;Q9ULX6 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 QGGS(0.985)PDEPDS(0.015)K 148.85 6.9287e-05 266300000.0 928460.0 804590.0 864260.0 854820.0 882830.0 919820.0 953150.0 864100.0 1013500.0 881840.0 True False 876956.4729608758 765936.2886857886 919971.5824648935 936061.8357889944 952303.6983844186 914079.0621900964 1049503.7038475624 861102.638782457 829473.9482558755 874027.5836611381 1.0033510261626633 0.8763296525235792 1.0525658453607432 1.0709751651864423 1.0895579455231796 1.0458240440893067 1.2007672566252288 0.9852122002551214 0.9490249092384068 1.0 19.73731928526472 -4.786813291512594 22.52893471190489 1.05621866739251 0.9398405180884896 0.2724172380625448 0.0707849732657113 78.75113870868323 69921.50523045973 0.018842766487946222 0.03926587100461044 1.633754167752659e-05 4.786813291512594 -0.11637814930402046 QGLAETAS(ph)PVAVSLR ddPTM_KYSE-520_SHP099_60min_R1 2 QGLAETASPVAVSLR 15 0 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 1 QGLAET(0.025)AS(0.975)PVAVSLR;QGLAET(0.166)AS(0.834)PVAVSLR 281.49 6.4922e-33 1887410000.0 1194870.0 1536690.0 1032510.0 805120.0 999300.0 1304530.0 1035390.0 1109660.0 1424530.0 1249900.0 True False 1128588.1791857092 1462865.1057812863 1099067.2466744108 881638.3627318444 1077939.2247607692 1296387.9443791662 1140057.3256326173 1105810.8484565914 1165871.2614789754 1238826.8584074855 0.9110136509604834 1.180847102121924 0.8871839024278695 0.7116719796220695 0.8701290397807989 1.0464641895524252 0.920271721504459 0.8926274409953571 0.9411091255946011 1.0 20.24054313616366 -4.803248414843297 24.99902991870361 0.9017690654092637 1.0459309812851565 0.21868467541895498 0.10310934672475099 181.18142964895972 108333.95155539093 0.02765406686168173 0.057567443006093455 1.5730828095063882e-05 4.803248414843297 0.14416191587589278 QGLKS(ph)PQESLSDLGAIESLR ddPTM_KYSE-520_SHP099_60min_R1 2 QGLKSPQESLSDLGAIESLR 20 1 Q96JG6;F8WDT1;F2Z3F0;A0A3B3IRQ5;C9JA29;Q96JG6-2 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 1 QGLKS(0.951)PQES(0.049)LSDLGAIESLR;QGLKS(0.999)PQES(0.001)LSDLGAIESLR 219.22 4.7006e-19 612840000.0 230552.0 212460.0 198754.0 180152.0 174319.0 210664.0 221957.0 221476.0 300346.0 232161.0 True False 217762.82096598222 202253.1026910383 211566.000857644 197273.59191532596 188036.91356056512 209349.16783415718 244394.5796515698 220707.75144888708 245810.73750652076 230104.23415852478 0.9463659882762512 0.8789629770641286 0.9194354968361454 0.8573227373965621 0.8171814579953431 0.909801458455263 1.0621037919849838 0.9591642337916989 1.068258210916603 1.0 17.81192800534042 -6.648931270784317 5.673974374644377 1.018323724994476 0.8823277742918647 0.6989388105118655 0.04331284853155179 0.11897661971708597 5.467375983752666 0.01670580298581029 0.012799194361800511 2.244237057119315e-07 6.648931270784317 -0.1359959507026114 QGMSMRES(ph)PVSAPLEGLICR ddPTM_KYSE-520_SHP099_60min_R1 1 QGMSMRESPVSAPLEGLICR 20 1 A0A088AWL3;O75376-2;O75376 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 QGMSMRES(0.996)PVS(0.004)APLEGLICR 222.92 3.3698e-19 345790000.0 233060.0 229990.0 167310.0 127560.0 152420.0 179530.0 149420.0 160550.0 220770.0 176890.0 True False 220131.6972064081 218940.93517797173 178095.07030546493 139683.26404768755 164414.5868488306 178409.4866767277 164524.8317986705 159993.08952265163 180683.73315880564 175322.89221833774 1.2555787462841297 1.2487869234173619 1.0158118432342245 0.7967200533843207 0.9377816254826408 1.0176051992944886 0.9384104364065594 0.9125624583206442 1.0305769593042748 1.0 17.419654858062007 -4.821451530835106 3.9898960507157777 0.9437939046221967 1.2575491621922572 0.7840833125531618 0.06285510043706398 0.08751708701285676 2.771641265747663 0.016986501675913493 0.040844886514210636 1.5085109575711176e-05 4.821451530835106 0.3137552575700605 QGNFFAS(ph)PMLK ddPTM_KYSE-520_SHP099_60min_R1 3 QGNFFASPMLK 11 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 QGNFFAS(1)PMLK;QGNFFAS(1)PMLK;QGNFFAS(1)PMLK 177.41 6.2749e-06 2648331000.0 2715060.0 2686700.0 2340490.0 1906250.0 2127840.0 2314580.0 2129460.0 2281440.0 2803350.0 2389960.0 True False 2564450.209462076 2557626.899181085 2491361.7303164047 2087419.4268650368 2295288.9022465283 2300133.847670142 2344726.5983268456 2273526.217132098 2294332.30670262 2368786.813760746 1.0826006775133512 1.079720169127644 1.051745862415139 0.8812187803219813 0.9689723401501334 0.9710176679084056 0.9898428109722117 0.9597850696925277 0.9685685066188291 1.0 21.17571693397671 -5.068044528505907 7.793461679573072 0.9628432120322649 1.0774981221391695 0.7386072542156985 0.02992514574496613 0.13998569622215193 14.56052716101406 0.008111033673824843 0.014187505664325617 8.549790468126767e-06 5.068044528505907 0.11465491010690465 QGPPS(ph)PCQQLVLTK ddPTM_KYSE-520_SHP099_60min_R1 2 QGPPSPCQQLVLTK 14 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QGPPS(1)PCQQLVLTK;QGPPS(1)PCQQLVLTK 243.26 1.6418000000000002e-18 1150970000.0 774780.0 952040.0 681500.0 570450.0 612510.0 870590.0 685670.0 843390.0 984350.0 944330.0 True False 731801.408914362 906302.569358826 725430.580438554 624665.3964879541 660711.052294825 865156.3248810369 754984.2150943277 840464.4769387053 805616.8534441742 935963.9708776221 0.7818692083074269 0.9683092486017559 0.7750625056201064 0.6674032504715178 0.7059150489257597 0.924347893508987 0.8066381170488904 0.8979666986012612 0.8607348984691945 1.0 19.83609347001834 -7.9638112749455825 0.6882263350286983 0.9959970776808228 0.7964811084336026 0.33378083210139575 0.08538467058979515 0.9748174685650915 1.0761989478768117 0.09162698853936352 0.0372385834002514 1.0868978384382062e-08 7.9638112749455825 -0.19951596924722015 QGPSPVS(ph)PNALDR ddPTM_KYSE-520_SHP099_60min_R1 1 QGPSPVSPNALDR 13 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 QGPS(0.005)PVS(0.995)PNALDR 92.939 0.0040948 0.0 325750.0 372040.0 308760.0 300700.0 293770.0 381430.0 348110.0 408860.0 495360.0 407690.0 True False 307679.9981334746 354166.63995657465 328663.1636334674 329278.43759124825 316888.0276773451 379049.35388572543 383300.3560262029 407441.76008864155 405415.11100940354 404078.1837780206 0.7614367973463717 0.8764804787163052 0.8133652763941785 0.8148879370635277 0.7842245397030065 0.9380594377595879 0.9485796843631826 1.008324073027582 1.0033085855288773 1.0 18.624274936809726 -6.500608051881489 2.1631796285430935 0.9948647241530756 0.8137470375777455 0.8719753406969274 0.032765727466436315 0.1069335402681769 1.0010127752403586 0.013999327429860745 0.01096795721293315 3.1578532810403607e-07 6.500608051881489 -0.18111768657533012 QGPVSQSATQQPVTADKQQGHEPVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 QGPVSQSATQQPVTADKQQGHEPVSPR 27 1 Q9BTA9-2;Q9BTA9;A0A0A0MRT2;Q9BTA9-5 Q9BTA9-2 WAC WW domain-containing adapter protein with coiled-coil 1 QGPVSQSATQQPVTADKQQGHEPVS(1)PR;QGPVSQSATQQPVT(0.001)ADKQQGHEPVS(0.999)PR;QGPVSQSATQQPVTADKQQGHEPVS(1)PR;QGPVSQSATQQPVTADKQQGHEPVS(1)PR;QGPVSQSATQQPVTADKQQGHEPVS(1)PR;QGPVSQSATQQPVTADKQQGHEPVS(1)PR 230.36 1.9582000000000003e-23 10427230000.0 4505260.0 5230990.0 5035580.0 3800520.0 3551280.0 3515610.0 2834850.0 2836480.0 5697720.0 3396560.0 True False 4255344.246786853 4979685.388523933 5360181.544012872 4161720.2781319954 3830745.5319808125 3493667.773940683 3121424.303469829 2826640.9129194086 4663157.675832726 3366469.1208836967 1.264037807561956 1.4792012668801096 1.5922265589074605 1.2362270761121805 1.137911976740557 1.0377839951859105 0.9272101395810386 0.8396455786225707 1.3851776173751593 1.0 21.682804801017 -5.660203564132416 2.207210953726655 1.0282045861276203 1.4465717278407018 0.5571557800659146 0.1553439170258549 0.21732212285180863 2.162322840404034 0.05079583312098469 0.06997587793982822 2.1867364084362056e-06 5.660203564132416 0.4183671417130814 QGQSQAASSSSVT(ph)SPIK ddPTM_KYSE-520_SHP099_60min_R1 1 QGQSQAASSSSVTSPIK 17 0 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 QGQSQAASSSSVT(0.633)S(0.367)PIK 150.28 2.5575e-05 362870000.0 373040.0 514550.0 300520.0 315580.0 315660.0 509050.0 329530.0 484020.0 504320.0 527550.0 True False 352346.72756319656 489830.24564470357 319892.0000490013 345572.6283174135 340500.646140283 505872.83012749074 362842.1083028774 482341.0475911169 412748.2008726226 522876.31742768927 0.6738624715240121 0.9367994482030527 0.6117928645587214 0.6609070191158622 0.6512068624859305 0.967480861661802 0.6939348679777534 0.9224763706339059 0.7893801786685496 1.0 18.99611020229345 -6.249540003260069 24.984165818266145 0.8585142580345372 0.7118447399794973 0.33602841812192075 0.11669543874333749 1018.7685620813169 2139027.617869227 0.03806942149830214 0.03778089431267713 5.629372623423922e-07 6.249540003260069 -0.14666951805503992 QGQSQAASSSSVTS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 5 QGQSQAASSSSVTSPIK 17 0 O60583-2;O60583 O60583-2 CCNT2 Cyclin-T2 1 QGQSQAASSSSVT(0.018)S(0.982)PIK;QGQSQAASSSSVT(0.002)S(0.998)PIK;QGQSQAASSSS(0.001)VT(0.004)S(0.995)PIK;QGQSQAASSSSVT(0.026)S(0.974)PIK;QGQSQAASSSSVT(0.017)S(0.983)PIK 321.6 1.419e-47 4420410000.0 5485310.0 7487410.0 4886040.0 4373070.0 4408370.0 6776910.0 5106070.0 6615490.0 7419980.0 6918130.0 True False 5181028.919605607 7127703.584768467 5201001.95634041 4788685.257988564 4755283.6388058 6734612.790922875 5622241.386040952 6592542.409256971 6072698.674474222 6856840.750423698 0.755600007085692 1.0395025703824363 0.7585128699421858 0.6983807021758033 0.6935094180963678 0.982174303888672 0.8199463266947745 0.9614547937181719 0.8856409089126035 1.0 22.70911258544046 -6.273436455873051 24.91102518556937 0.9205656309542088 0.7962729324239695 0.3164036541413978 0.10271580193647237 1099.7102113268436 2283458.8462394844 0.03795863407944331 0.03372682541128719 5.327991755360862e-07 6.273436455873051 -0.12429269853023939 QGQTS(ph)PIKPK ddPTM_KYSE-520_SHP099_60min_R1 2 QGQTSPIKPK 10 1 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 QGQT(0.047)S(0.953)PIKPK;QGQT(0.233)S(0.767)PIKPK 142.12 0.00035463 2172670000.0 4248800.0 3902600.0 3691000.0 3286000.0 3311090.0 3900600.0 3517980.0 3849800.0 4742300.0 3959200.0 True False 4013110.5942271873 3715113.2380779698 3928927.765808803 3598300.4520280776 3571653.9454749688 3876254.908545892 3873611.7505761418 3836445.9423500723 3881217.863654499 3924124.5682109864 1.0226766567853298 0.9467368258831026 1.0012240176157319 0.9169689670857079 0.9101785336807722 0.9878011875431064 0.9871276212676721 0.9776565131058297 0.989065916789678 1.0 21.90393940881399 QGRPS(ph)PT(ph)SPVKPS(ph)SPASKPDGPAELPLTDR ddPTM_KYSE-520_SHP099_60min_R1 1 QGRPSPTSPVKPSSPASKPDGPAELPLTDR 30 3 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 3 QGRPS(0.949)PT(0.52)S(0.52)PVKPS(0.473)S(0.438)PAS(0.098)KPDGPAELPLT(0.001)DR 51.533 0.059628 597650000.0 175350.0 165970.0 179570.0 150820.0 142870.0 211510.0 152910.0 211570.0 243230.0 187870.0 True False 165622.98594844114 157996.55207395123 191145.3695221586 165153.88745431358 154113.05618089775 210189.88763434938 168367.63505778817 210836.11305080936 199065.56332933047 186205.6179606484 0.8894628838934544 0.8485058281503691 1.026528477580919 0.8869436339413573 0.8276498736652892 1.1288052956531616 0.9042027673588774 1.1322757893124697 1.0690631437951557 1.0 17.506537075162193 -6.258994141527139 24.999974369649816 1.046219971419502 0.8999583353468088 0.4819135839216966 0.0782485445784411 203.1438853927499 2076939.199693788 0.026232932363776686 0.025056337275129476 5.508151266487992e-07 6.258994141527139 -0.14626163607269316 QGRPS(ph)PTSPVKPSSPASKPDGPAELPLTDR ddPTM_KYSE-520_SHP099_60min_R1 1 QGRPSPTSPVKPSSPASKPDGPAELPLTDR 30 3 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 QGRPS(0.316)PT(0.316)S(0.316)PVKPS(0.039)S(0.011)PAS(0.003)KPDGPAELPLTDR 59.016999999999996 0.055994 636650000.0 107230.0 98339.0 83272.0 103490.0 107870.0 120840.0 87655.0 109930.0 137220.0 111620.0 True False 101281.73814229466 93614.64683015166 88639.84635991085 113325.65848459695 116358.75530365684 120085.79273667783 96516.02283036063 109548.67848785495 112304.30703470268 110631.13363904583 0.9154903760883869 0.8461871785169123 0.8012197239984402 1.0243559363166475 1.0517722405638399 1.0854611065315443 0.8724128521114289 0.9902156371756744 1.0151238927110326 1.0 16.75539791810997 -5.26909612590183 24.986828328164886 1.0049119556421457 0.8534879002139002 0.5886980139317132 0.05795869308962877 412.4193462899914 1345878.396293548 0.01728059337056166 0.026175791430925355 5.381506561063296e-06 5.26909612590183 -0.15142405542824555 QGRPTLQEGPGLQQKPRPEAEPPS(ph)PPSGDLR ddPTM_KYSE-520_SHP099_60min_R1 5 QGRPTLQEGPGLQQKPRPEAEPPSPPSGDLR 31 3 F8WDP1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-4;Q8WUA7;B0QYI1;Q8WUA7-2 F8WDP1 TBC1D22A TBC1 domain family member 22A 1 QGRPTLQEGPGLQQKPRPEAEPPS(0.972)PPS(0.028)GDLR;QGRPTLQEGPGLQQKPRPEAEPPS(0.983)PPS(0.017)GDLR;QGRPTLQEGPGLQQKPRPEAEPPS(0.982)PPS(0.018)GDLR;QGRPTLQEGPGLQQKPRPEAEPPS(0.94)PPS(0.06)GDLR;QGRPTLQEGPGLQQKPRPEAEPPS(0.982)PPS(0.018)GDLR 149.66 0.00031202 28475500000.0 7033130.0 6731920.0 6577060.0 6270910.0 6413660.0 6171390.0 5945850.0 6660150.0 7983980.0 6472380.0 True False 6642988.258702931 6408508.45838207 7001027.811268077 6866895.400982156 6918378.553266437 6132872.065849113 6546914.543903932 6637047.494140701 6534290.491757215 6415039.748635445 1.0355334524803177 0.9989818784435803 1.0913459753319967 1.0704369216796867 1.0784623048887667 0.9560146633781417 1.020557128316553 1.0346073842414585 1.01858924461803 1.0 22.61302677384125 -6.235054810993052 24.998051054538976 1.0090293451705072 1.0547247975100418 0.38786342247675 0.030655566897220585 936.0078240556909 886820.7517417772 0.010795726328607879 0.01079309686312053 5.820297569200413e-07 6.235054810993052 0.04569545233953454 QGS(ph)FSEDVISHK ddPTM_KYSE-520_SHP099_60min_R1 8 QGSFSEDVISHK 12 0 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5;E9PNZ4 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 QGS(0.999)FS(0.001)EDVISHK;QGS(0.999)FS(0.001)EDVISHK;QGS(0.5)FS(0.5)EDVISHK;QGS(0.957)FS(0.043)EDVISHK;QGS(1)FSEDVISHK;QGS(0.998)FS(0.002)EDVISHK;QGS(0.996)FS(0.004)EDVISHK;QGS(0.999)FS(0.001)EDVISHK 269.87 5.8334e-22 9404010000.0 5926610.0 5526470.0 5273740.0 5398140.0 5455950.0 5194940.0 5399740.0 5281290.0 6446580.0 5046510.0 True False 5597849.128895871 5260970.085799412 5613693.718682346 5911177.602590034 5885302.224890942 5162516.452494855 5945598.415583949 5262970.437652353 5276043.577057086 5001801.847525374 1.1191665122970416 1.051814975117869 1.1223342886843275 1.1818096323656986 1.176636421093466 1.0321313418381406 1.1886913150159106 1.0522149013672326 1.054828587355453 1.0 22.254016473853248 -7.676976700930629 1.894531058353753 1.010349671684133 1.1223758897154996 0.38107567648561036 0.05129289296951648 0.36298725913290364 2.4158531617940793 0.04769861871982074 0.014374121210746865 2.103891306488677e-08 7.676976700930629 0.1120262180313667 QGS(ph)FTIEKPSPNIPIELIPHINK ddPTM_KYSE-520_SHP099_60min_R1 4 QGSFTIEKPSPNIPIELIPHINK 23 1 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 QGS(0.498)FT(0.498)IEKPS(0.004)PNIPIELIPHINK;QGS(0.487)FT(0.487)IEKPS(0.026)PNIPIELIPHINK;QGS(0.969)FT(0.031)IEKPSPNIPIELIPHINK;QGS(0.815)FT(0.185)IEKPSPNIPIELIPHINK 174.53 6.9164e-11 3937460000.0 1623990.0 1677000.0 1711620.0 1538410.0 1654440.0 1599220.0 1419460.0 1576690.0 2079340.0 1359730.0 True False 1533904.037356197 1596434.4027716815 1821953.7638888285 1684620.0238601677 1784635.015524075 1589238.6747794624 1562952.8693946016 1571220.8303922126 1701784.2718957784 1347683.8500539311 1.13817794677499 1.1845763401466864 1.3519148157900076 1.2500112869889723 1.3242237899138274 1.1792370107543138 1.1597325807028525 1.1658675217702847 1.262747395709815 1.0 20.362050667139325 -6.464509723474667 10.726680447201977 1.1621193753978896 1.2518921037455673 0.2501937713055423 0.08314496342285382 1.265888848954157 229.9424211291178 0.029326784005530824 0.02582187916136343 3.4315495677027104e-07 6.464509723474667 0.08977272834767769 QGS(ph)GVILR ddPTM_KYSE-520_SHP099_60min_R1 1 QGSGVILR 8 0 P46108;P46108-2;I3L297 P46108 CRK Adapter molecule crk 1 QGS(1)GVILR 116.55 0.0024056 0.0 192880.0 191840.0 193090.0 171350.0 169300.0 190590.0 187500.0 202470.0 234850.0 199490.0 True False 182180.56190325276 182623.7184422895 205536.8903549236 187635.05248174377 182622.94681476866 189400.4571142294 206454.3298236567 201767.67882685328 192207.1600867217 197722.6738008714 0.9213943874071253 0.9236356909992619 1.0395210948943672 0.9489809584039564 0.9236317884244787 0.9579096492746026 1.0441611265664912 1.0204579725138436 0.972104799069709 1.0 17.59311879570332 -6.671821685293828 8.326987044419377 1.0107637239769296 0.9533809636480337 0.37100781148559303 0.03614033044869698 0.2988378200874661 24.522073518898015 0.014538306591797265 0.011230143753686112 2.1290130068991007e-07 6.671821685293828 -0.05738276032889589 QGS(ph)PDQVSPVSEMTSTSLYQDKQEGK ddPTM_KYSE-520_SHP099_60min_R1 1 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGS(0.856)PDQVS(0.143)PVS(0.001)EMTSTSLYQDKQEGK 130.33 4.8419e-05 1152600000.0 476480.0 587920.0 571190.0 370520.0 415730.0 373110.0 313230.0 360180.0 665460.0 359880.0 True False 450048.7045606686 559675.4407140885 608009.8213363129 405734.10939910036 448445.5858198681 370781.282091873 344894.34523020755 358930.61964664416 544629.2388814555 356691.74318240356 1.2617300881296951 1.5690731602606343 1.7045805880216054 1.137492294548623 1.257235678681084 1.0395006029120903 0.966925508712538 1.006276782423572 1.526890513422805 1.0 18.444318294649523 -5.282046096582284 23.409936285630288 1.1280375328359387 1.5175224241935588 0.46608375447093664 0.1854611521639878 296.5430243408294 336882.3233474563 0.0527337906082666 0.07835163342928059 5.223407441293777e-06 5.282046096582284 0.3894848913576201 QGS(ph)PGSVSK ddPTM_KYSE-520_SHP099_60min_R1 7 QGSPGSVSK 9 0 O00425 O00425 IGF2BP3 Insulin-like growth factor 2 mRNA-binding protein 3 1 QGS(0.996)PGS(0.004)VSK;QGS(0.971)PGS(0.028)VS(0.001)K;QGS(0.817)PGS(0.183)VSK;QGS(0.726)PGS(0.258)VS(0.016)K;QGS(0.728)PGS(0.255)VS(0.018)K;QGS(1)PGSVSK;QGS(0.974)PGS(0.026)VSK 162.23 0.00013232 36504100000.0 71245300.0 57708700.0 54906500.0 56099500.0 55266900.0 68607100.0 74156700.0 54990100.0 75862200.0 66422700.0 True False 67293181.1850156 54936287.42947539 58445860.84350612 61431179.61307034 59616090.60435394 68178897.64038841 81653182.9356476 54799352.177885786 62087536.810435966 65834246.55407867 1.0221607249615672 0.834463676657235 0.8877729130764266 0.9331188982714113 0.9055483084382699 1.035614459176407 1.2402843080853774 0.8323836763723207 0.9430887427174394 1.0 25.972334924172333 -6.255889658037894 23.95926342621224 1.0141738474426234 0.9113638292366536 0.16596111684561976 0.10447034003200956 481.2793318209517 2077781.244859061 0.036387609102518856 0.03539703557722142 5.547666455900644e-07 6.255889658037894 -0.1028100182059698 QGS(ph)PVAAGAPAK ddPTM_KYSE-520_SHP099_60min_R1 5 QGSPVAAGAPAK 12 0 Q9NZI8 Q9NZI8 IGF2BP1 Insulin-like growth factor 2 mRNA-binding protein 1 1 QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK;QGS(1)PVAAGAPAK 161.09 3.6687e-06 25422900000.0 24402300.0 27613700.0 21256800.0 16669500.0 19227200.0 24877100.0 19161200.0 24136900.0 28669500.0 25289300.0 True False 23048655.77422094 26287096.402991273 22627047.340082526 18253764.268132083 20740271.252196778 24721832.791208297 21098201.091290914 24053174.72749482 23463841.49928153 25065256.47677767 0.9195459777391443 1.0487463564294908 0.9027255460579834 0.7282496504691159 0.8274509886388802 0.986298816216481 0.8417309079138235 0.9596221267386386 0.9361101699087017 1.0 24.57918566058522 -9.584202476156928 9.048035175687035 1.0000085514940336 0.9043019415528701 0.09915716764870952 0.08527030014559132 0.0 0.0 0.08867198945931333 0.021506116386729692 2.6049387959823606e-10 9.584202476156928 -0.09570660994116342 QGSES(ph)PAQAGR ddPTM_KYSE-520_SHP099_60min_R1 1 QGSESPAQAGR 11 0 K7EKI0;Q92817 K7EKI0 EVPL Envoplakin 1 QGS(0.034)ES(0.966)PAQAGR 83.869 0.012367 28996000.0 99575.0 104230.0 97499.0 77859.0 92211.0 96275.0 82638.0 87011.0 110560.0 101730.0 True False 94051.3762521587 99222.63434758049 103783.94154391573 85258.69595083798 99467.48109117922 95674.11201360202 90991.85550915908 86709.17914952002 90485.09099079379 100828.75134474238 0.9327833083104319 0.9840708431301461 1.0293090032333068 0.8455792104310703 0.9864991856448875 0.9488772868612029 0.9024395749784693 0.8599648214729317 0.8974135827728075 1.0 16.621547556806213 -5.740074067937021 0.8591078967094149 0.9106263472386946 0.9733954049323602 0.08146870325357225 0.056162293172616964 1.3158779486809788 2.0927941960120964 0.029219144921836367 0.049669950908453546 1.8193905392264227e-06 5.740074067937021 0.06276905769366559 QGSFS(ph)EDVISHK ddPTM_KYSE-520_SHP099_60min_R1 2 QGSFSEDVISHK 12 0 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5;E9PNZ4 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 QGS(0.191)FS(0.804)EDVIS(0.005)HK;QGS(0.285)FS(0.715)EDVISHK 162.88 3.3810000000000003e-06 2045200000.0 1748830.0 1510660.0 1600800.0 1599030.0 1446430.0 1435580.0 1480180.0 1401950.0 1814960.0 1483110.0 True False 1651818.9136938264 1438085.6260531133 1703990.1293705604 1751001.3304340993 1560255.811939078 1426620.012718636 1629811.0395646929 1397086.9626675888 1485409.0154183367 1469970.7992421186 1.1237086577131086 0.9783089751133529 1.159199985638556 1.1911810298115264 1.0614195960515054 0.9705090832104739 1.1087370173645517 0.9504181738765785 1.0105023964994255 1.0 20.487356065741587 -6.000669689856569 24.998860164815614 1.011754654502954 1.1092066013291655 0.3702470643975867 0.06447660300738645 30.192415272729384 1127123.6038720268 0.020687920990042477 0.023198236823616162 9.98459170418037e-07 6.000669689856569 0.09745194682621139 QGSGPAPTTHKGT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 QGSGPAPTTHKGTPK 15 1 A0A2R8Y7K2;A0A2R8Y5N9;A0A2R8Y481;A0A2R8YFW8;A0A2R8YGN6;A0A2R8YCL5;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0 A0A2R8Y7K2 SPAST Spastin 1 QGSGPAPTT(0.006)HKGT(0.993)PK;QGSGPAPT(0.005)T(0.025)HKGT(0.97)PK;QGSGPAPTTHKGT(1)PK;QGSGPAPT(0.002)THKGT(0.998)PK 181.54 7.4269e-09 2771360000.0 1892890.0 1952870.0 2057290.0 2105610.0 1634110.0 1656080.0 1493630.0 1494620.0 2077610.0 1495300.0 True False 1787887.6183173365 1859051.1938823692 2189906.205180383 2305726.541325268 1762705.1601859513 1645743.7904283137 1644620.6968240445 1489435.5120669291 1700368.3962860273 1482052.8053257954 1.2063589177743976 1.2543758138723669 1.4776168550208857 1.5557654444157316 1.1893673112399399 1.110448821063791 1.1096910251200611 1.0049814060029465 1.1473062161993886 1.0 20.49916542089806 -5.968701879555184 6.807812774592253 1.0844219269945143 1.3736326826756993 0.6538994466636935 0.10247655748086787 0.1257291338937077 18.69840604893468 0.0350781908882603 0.03941867638986254 1.0747269029901585e-06 5.968701879555184 0.28921075568118493 QGSGRES(ph)PSLASR ddPTM_KYSE-520_SHP099_60min_R1 12 QGSGRESPSLASR 13 1 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7;H3BSK9 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 QGSGRES(0.976)PS(0.024)LASR;QGS(0.015)GRES(0.492)PS(0.492)LAS(0.002)R;QGS(0.001)GRES(0.977)PS(0.021)LASR;QGS(0.001)GRES(0.99)PS(0.009)LASR;QGSGRES(0.993)PS(0.007)LASR;QGSGRES(0.992)PS(0.008)LASR;QGSGRES(1)PSLASR;QGSGRES(0.998)PS(0.002)LASR;QGSGRES(0.966)PS(0.034)LASR;QGSGRES(0.998)PS(0.002)LASR;QGSGRES(0.911)PS(0.089)LASR;QGS(0.016)GRES(0.977)PS(0.007)LASR 165.16 5.8402e-07 34330150000.0 12886850.0 11380260.0 11349460.0 9346780.0 9774750.0 10181610.0 9567750.0 8932240.0 11947530.0 9607340.0 True False 12171990.741201434 10833535.227481496 12081064.351378072 10235095.160988113 10543967.214280311 10118062.79531354 10534951.542241534 8901256.14424049 9778159.724721773 9522226.441997422 1.2782715067053358 1.1377103131785016 1.2687226485283938 1.074863659600302 1.1073006169834967 1.0625732182431837 1.1063538140384404 0.93478727884288 1.0268774623543466 1.0 23.182867506437532 -5.46494426412261 0.43762213264677685 0.9818773549153447 1.301060584716142 0.706366817769663 0.05590500890140066 1.0667511262246279 0.3282835978227164 0.04769636063245782 0.16087122005734344 3.4281177902177224e-06 5.46494426412261 0.3191832298007974 QGSGRESPS(ph)LASR ddPTM_KYSE-520_SHP099_60min_R1 1 QGSGRESPSLASR 13 1 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7;H3BSK9 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 QGS(0.002)GRES(0.051)PS(0.871)LAS(0.076)R 142.57 1.6749000000000002e-05 4230300000.0 949800.0 922680.0 841610.0 674690.0 743530.0 765190.0 712760.0 627600.0 849280.0 676360.0 True False 897112.7006206422 878353.0678290854 895861.5272236118 738812.3347470539 802041.5808930001 760414.1653771813 784812.7366672494 625423.0020829409 695072.1606065604 670367.9766001172 1.3382391938983997 1.3102551113551086 1.336372795978595 1.10209968336206 1.196419890103772 1.1343235236768743 1.1707193124700823 0.9329547709824652 1.0368516767935942 1.0 19.354593707746645 -5.690198630793264 0.3984726349509044 0.9726292288022054 1.4260343146432586 0.777529673359597 0.06381417466877976 0.9219965510290312 0.24965855107663762 0.06385068078328865 0.17949307833893974 2.0408043401313414e-06 5.690198630793264 0.4534050858410532 QGSIT(ph)SPQANEQS(ph)VTPQRR ddPTM_KYSE-520_SHP099_60min_R1 1 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGS(0.024)IT(0.538)S(0.438)PQANEQS(0.693)VT(0.307)PQRR 107.58 0.00017484 846090000.0 635080.0 588060.0 517070.0 547870.0 576090.0 524510.0 572610.0 563780.0 676010.0 550140.0 True False 599850.8463994071 559808.714903944 550401.1595412513 599939.400076878 621425.0054962786 521236.33853289427 630495.0069350617 561824.3787672407 553263.6248253128 545266.1876024433 1.1001064434913428 1.0266705099860398 1.009417367252106 1.1002688479820013 1.1396727316408681 0.9559300583533169 1.1563068117379014 1.030367170276236 1.0146670331018224 1.0 19.056601169980706 -7.510138248518305 24.528487967842487 1.0123946726356927 1.0672768489467193 0.16619947986072936 0.057347402798707314 908.008072232683 1748153.5469059246 0.03298404009437488 0.014575346460384895 3.089311858487126e-08 7.510138248518305 0.05488217631102654 QGSIT(ph)SPQANEQSVT(ph)PQRR ddPTM_KYSE-520_SHP099_60min_R1 1 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGSIT(0.817)S(0.183)PQANEQSVT(1)PQRR 231.37 9.1844e-20 1019800000.0 1143300.0 992780.0 950680.0 884000.0 922940.0 978960.0 898630.0 976390.0 1133300.0 960810.0 True False 1079878.8698879532 945085.3586068398 1011962.3539417807 968015.0942157087 995570.1271897368 972849.9475132261 989472.2901836395 973003.1309811381 927521.2881681143 952297.9708988685 1.133971616960038 0.9924260971750042 1.0626530611911262 1.0165044175217604 1.0454397232937753 1.021581455849327 1.0390364365154348 1.0217423125061644 0.9739822161887338 1.0 19.861053533134857 -4.25172861589987 24.987048555898244 1.022720455292404 1.1339716769725117 0.6533080564738076 0.024954492398374477 804.6208260607044 2070352.0482937458 0.005957602524185481 0.07540084164092897 5.601074949248378e-05 4.25172861589987 0.11125122168010759 QGSITS(ph)PQANEQSVT(ph)PQRR ddPTM_KYSE-520_SHP099_60min_R1 5 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QGS(0.036)IT(0.428)S(0.527)PQANEQS(0.146)VT(0.863)PQRR;QGS(0.104)IT(0.422)S(0.474)PQANEQS(0.325)VT(0.675)PQRR;QGS(0.008)IT(0.412)S(0.58)PQANEQS(0.002)VT(0.998)PQRR;QGS(0.015)IT(0.441)S(0.544)PQANEQS(0.008)VT(0.992)PQRR;QGS(0.015)IT(0.222)S(0.763)PQANEQS(0.017)VT(0.983)PQRR 165.79 1.1679e-08 6000040000.0 2261210.0 2000880.0 1910090.0 1849890.0 1887110.0 1941750.0 2029300.0 1906960.0 2392950.0 1913070.0 True False 2135776.173689617 1904754.7214178902 2033217.4576520566 2025702.9894102933 2035614.8208128647 1929630.8179944095 2234441.4480594466 1900345.2008478083 1958450.6013605306 1896121.6881459395 1.126391933092657 1.004552995372566 1.0723032547769504 1.06834018200122 1.0735676056758383 1.017672457447199 1.1784272402075218 1.002227448126496 1.0328717896136388 1.0 20.85462012493751 QGSITSPQANEQSVT(ph)PQRR ddPTM_KYSE-520_SHP099_60min_R1 11 QGSITSPQANEQSVTPQRR 19 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QGSITSPQANEQS(0.116)VT(0.884)PQRR;QGSITSPQANEQS(0.026)VT(0.974)PQRR;QGSITS(0.009)PQANEQS(0.104)VT(0.886)PQRR;QGSITSPQANEQS(0.026)VT(0.974)PQRR;QGSITS(0.001)PQANEQS(0.209)VT(0.791)PQRR;QGSITSPQANEQS(0.034)VT(0.966)PQRR;QGSITSPQANEQS(0.204)VT(0.795)PQRR;QGSITSPQANEQSVT(1)PQRR;QGSITSPQANEQSVT(1)PQRR;QGSITSPQANEQS(0.033)VT(0.967)PQRR;QGSITSPQANEQSVT(1)PQRR 229.71 3.5851999999999997e-19 13716320000.0 1993199.0 2131346.0 1763978.0 1381726.0 1656104.0 2063178.0 1521457.0 1861845.0 2167997.0 2035416.0 True False 1882632.2781263038 2028952.938944433 1877686.8443445934 1513044.8236089284 1786429.9628572094 2050300.9408049795 1675260.7215493917 1855386.6942528908 1774343.3955568722 2017383.7977696846 0.933204817153605 1.00573472493808 0.9307534076661402 0.7500034575878287 0.8855181472321698 1.0163167479939546 0.8304124992980877 0.9196994128257154 0.8795269385619606 1.0 20.94405414532561 -5.0004089904515086 24.998614488689856 0.8914282822778518 0.9691633704596863 0.1291669249975339 0.07396969892768332 27.34711437370994 1672021.2034571923 0.019359345026053243 0.0396232113158817 9.99058707976717e-06 5.0004089904515086 0.0777350881818345 QGSNTS(ph)GSDTLSFPLLR ddPTM_KYSE-520_SHP099_60min_R1 1 QGSNTSGSDTLSFPLLR 17 0 Q9P2G1 Q9P2G1 ANKIB1 Ankyrin repeat and IBR domain-containing protein 1 1 QGS(0.037)NT(0.285)S(0.653)GS(0.025)DTLSFPLLR 90.75399999999999 0.0016599 108850000.0 122310.0 132530.0 123210.0 88189.0 105130.0 124830.0 119700.0 109830.0 146150.0 129020.0 True False 115525.22048105986 126163.05986841442 131152.31374297035 96570.45604501039 113403.13289212412 124050.88966666268 131800.44415942227 109449.0253645148 119612.84414168334 127876.98317604123 0.903409023358196 0.9865970930416199 1.025613136043569 0.7551824702657173 0.8868142653632065 0.9700798891688633 1.0306815259942426 0.8558930829158077 0.9353743040451532 1.0 16.964397088570106 -6.270969338442859 23.81255158117058 0.953916312126516 0.9133467031423631 0.07979034792903972 0.078751667313784 1296.7986222594698 3240305.49441819 0.029467208928899643 0.026367567277298675 5.358344865451547e-07 6.270969338442859 -0.04056960898415285 QGSPDQVSPVS(ph)EMTSTSLYQDKQEGK ddPTM_KYSE-520_SHP099_60min_R1 1 QGSPDQVSPVSEMTSTSLYQDKQEGK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QGSPDQVS(0.196)PVS(0.795)EMT(0.007)S(0.002)TSLYQDKQEGK 215.47 1.0699e-21 649600000.0 603090.0 863330.0 738250.0 510450.0 467930.0 533280.0 409340.0 528550.0 929720.0 625050.0 True False 569635.3954698907 821854.3309152508 785838.7762417643 558963.0145276118 504753.4288424959 529951.6017098284 450720.0819734159 526716.5834144977 760906.2843339441 619512.5432815413 0.9194896885421355 1.326614513020044 1.2684792015335111 0.9022626266238286 0.8147590138673069 0.8554332070545158 0.727539880929551 0.850211330063624 1.2282338631974163 1.0 19.240773967370693 -5.273800030227994 22.772133646199656 0.8909692398219438 1.1870364503351774 0.3488819250010716 0.16090372433400374 219.60602389604588 404582.1050878369 0.045586900981139336 0.06830727209588768 5.323533235551229e-06 5.273800030227994 0.2960672105132336 QGTALLLPS(ph)PEFDYRPESEK ddPTM_KYSE-520_SHP099_60min_R1 2 QGTALLLPSPEFDYRPESEK 20 1 Q5THK1-3;Q5THK1-2;Q5THK1-4;Q5THK1 Q5THK1-3 PRR14L Protein PRR14L 1 QGTALLLPS(0.999)PEFDYRPESEK;QGT(0.001)ALLLPS(0.999)PEFDYRPESEK 63.291000000000004 0.013478 494340000.0 188344.0 198537.0 143352.0 165675.0 177604.0 172111.0 137777.0 187885.0 224385.0 193939.0 True False 177896.18286554446 188998.98450988746 152592.69929130978 181420.70218799505 191580.42437147177 171036.79140766605 151704.84373394103 187233.2707876888 183642.3402855398 192220.8513422586 0.925478071828907 0.9832387235314318 0.7938405132729905 0.9438138522493933 0.9966682752348937 0.8897931218873165 0.7892215785883872 0.974052864089707 0.9553715895189522 1.0 17.552405316773342 QGVCCADRR ddPTM_KYSE-520_SHP099_60min_R1 2 QGVCCADRR 9 1 K7EQ05;P28799-3;P28799;P28799-2 K7EQ05 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 0 ; 86.18 0.011692000000000001 184019000.0 130408.0 147668.0 106132.0 104520.0 131290.0 114842.0 78314.0 112388.0 122901.0 92946.0 False True 123174.00827809704 140573.8076258133 112973.43853720394 114453.54937491623 141621.77606208477 114125.22847952298 86230.74339098585 111998.15225955633 100585.27648208702 92122.57075089382 1.3370665546358729 1.525943169844176 1.2263383187893484 1.242405074478512 1.5373189752274763 1.2388411173210305 0.9360436067742844 1.2157514857288072 1.0918635429104229 1.0 16.491267050752036 -6.5293275277061165 13.46405867631579 1.080081470406585 1.3689080293618134 0.6135077251994577 0.11664923795342856 0.44762502449794134 924.289916639066 0.04387319839015775 0.03450653579810502 2.9557824916312976e-07 6.5293275277061165 0.28882655895522835 QGVLTHGR ddPTM_KYSE-520_SHP099_60min_R1 2 QGVLTHGR 8 0 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 0 ; 110.87 0.001831 1980910000.0 2598400.0 2321080.0 1831480.0 1686900.0 2491800.0 2228820.0 1752440.0 2242930.0 2181500.0 1891900.0 False True 2454261.57221802 2209571.8327878923 1949540.1312716089 1847222.468815022 2687890.4835973997 2214909.1076411973 1929593.7373662342 2235149.7993337954 1785394.591139805 1875139.2378759272 1.3088423102905662 1.178350806253084 1.0396775300163628 0.9851121620746798 1.4334351440707518 1.1811971414720892 1.0290402431938817 1.1919913754594949 0.9521397425197177 1.0 20.83856629577795 -7.629017449678763 1.3609645855245505 0.9785723689243634 1.1722630224303157 0.2282025443300315 0.13052369136229236 0.7026182029082348 2.425073891615715 0.1254893964874735 0.040575439202164415 2.3495384159779487e-08 7.629017449678763 0.19369065350595227 QGYACPYYHNS(ph)KDR ddPTM_KYSE-520_SHP099_60min_R1 4 QGYACPYYHNSKDR 14 1 Q9C0B0 Q9C0B0 UNK RING finger protein unkempt homolog 1 QGYACPYYHNS(1)KDR;QGYACPYY(0.002)HNS(0.998)KDR;QGYACPYYHNS(1)KDR;QGYACPYYHNS(1)KDR 141.6 3.6045999999999998e-06 1818140000.0 1889700.0 1621360.0 1459050.0 1421480.0 1512130.0 1679360.0 1332550.0 1588290.0 1900280.0 1378290.0 True False 1784874.5739764418 1543467.4318890243 1553102.6975625393 1556577.031816453 1631126.028157213 1668878.4913130393 1467257.1584347365 1582780.5926996737 1555237.054160508 1366079.4228933936 1.3065672054381938 1.129851900279647 1.1369051253791858 1.1394484140018597 1.194019908961401 1.221655537258814 1.0740643141575514 1.1586299933771795 1.1384675210658495 1.0 20.3816099326619 -13.999999999319387 0.13561521413271216 0.4422809345481806 1.2261986517996974 0.49700753360108507 0.05527729031884774 128.0848609552683 1.0768030511065816 19.31519528720563 0.3768650015290695 1.000000001567169e-14 13.999999999319387 0.7839177172515168 QHEAPSNRPLNELLTPQGPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 QHEAPSNRPLNELLTPQGPSPR 22 1 Q96II5;P10398 Q96II5 ARAF Serine/threonine-protein kinase A-Raf 1 QHEAPSNRPLNELLT(0.002)PQGPS(0.998)PR 86.625 0.0020397 723320000.0 194490.0 203100.0 175180.0 278010.0 135700.0 207040.0 176000.0 176450.0 259760.0 245630.0 True False 183701.2519937969 193342.7711406846 186472.38309791044 304431.9868132457 146378.81797261714 205747.78656241167 193791.79759447233 175837.93613373957 212594.13201672034 243453.90929724826 0.7545627528597392 0.7941658102709709 0.7659453226123164 1.2504707264385944 0.60125885180958 0.8451200769637311 0.7960102105317178 0.7222637608954882 0.8732418083997605 1.0 17.893289141519396 QHFIQEEQILEIDCTMLTPEPVLK ddPTM_KYSE-520_SHP099_60min_R1 1 QHFIQEEQILEIDCTMLTPEPVLK 24 0 P41250 P41250 GARS Glycine--tRNA ligase 0 64.069 0.044606 39984000.0 38674.0 29552.0 17775.0 33362.0 20726.0 22633.0 25192.0 30895.0 19130.0 13070.0 False True 36528.67612529237 28132.277561543677 18920.804941005557 36532.714449348925 22357.018285191327 22491.73905171493 27738.653210226952 30787.832455947213 15656.474228056137 12954.209968306139 2.8198304809528087 2.1716706484125474 1.4605911890649705 2.820142219304004 1.7258496149043565 1.7362493819957663 2.141284823859775 2.3766661595939036 1.2086012397792978 1.0 13.66113341285506 -9.918915989813103 0.15747948183363503 2.491454703025231e-13 2.5782741998815073 0.4102197789297679 0.4587944998411019 27.580304645063883 0.9526906972813588 14.800884699308307 2.8209850626750206 1.2052690657991907e-10 9.918915989813103 2.578274199881258 QHFISFDTDR ddPTM_KYSE-520_SHP099_60min_R1 2 QHFISFDTDR 10 0 C9J0K6;P30626-3;P30626-2;P30626 C9J0K6 SRI Sorcin 0 ; 143.17 0.00036909 1708380000.0 493450.0 470420.0 316120.0 320650.0 555670.0 490510.0 373760.0 365020.0 389010.0 367510.0 False True 466077.3448318121 447820.3170851839 336497.6010098833 351124.4795930618 599398.0676701859 487448.5451445536 411543.3083460796 363753.8308163088 318375.5901440727 364254.1473184538 1.2795388831203562 1.2294172087865656 0.9237989559956773 0.9639546513826972 1.6455490543698725 1.3382100073067815 1.1298246330913637 0.9986264631279336 0.8740479483565874 1.0 18.474585873031895 -7.21062987815738 2.9548161873727956 0.9419291839023881 1.2227089671985554 0.2893613568802179 0.19046064247278963 0.39432758259505507 6.791557959293402 0.12223019259495044 0.0592832286892533 6.15701372692759e-08 7.21062987815738 0.28077978329616726 QHHPPYHQQHHQGPPPGGPGGR ddPTM_KYSE-520_SHP099_60min_R1 15 QHHPPYHQQHHQGPPPGGPGGR 22 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ;;;;;;;;;;;;;; 132.59 7.7957e-06 58394753700.0 932214.87 859480.12 785325.9 782609.0 508242.52999999997 752528.7999999999 805868.3600000001 982792.6799999999 828525.3300000001 428560.1 False True 880503.0528368293 818189.4049292384 835949.2640798682 856987.9240600242 548238.325606576 747831.9886228152 887333.3983460763 979383.6015786148 678086.0154959076 424763.3909287125 2.072925943339131 1.9262239223119726 1.9680351036188157 2.0175654078527954 1.290691093711949 1.7605848446301788 2.0890062969080034 2.305715658398121 1.596385258186504 1.0 18.696299904417046 -8.01137452563513 24.061318654621324 0.9999999792094932 1.913951683329101 0.5612165150731611 0.25202827681532247 261.41749859238155 552995.9967017837 0.2604861237403814 0.0672572279621067 9.7414919138074e-09 8.01137452563513 0.9139517041196078 QHIPYREDK ddPTM_KYSE-520_SHP099_60min_R1 2 QHIPYREDK 9 1 U3KPX3;A0A590UJ43;P48729;P48729-2;U3KQ83;D6REM4;E7ETM0;A0A5F9W493;P48729-3;Q8N752 U3KPX3 CSNK1A1;CSNK1A1L Casein kinase I isoform alpha;Casein kinase I isoform alpha-like 0 ; 64.297 0.030157 4447300000.0 9332600.0 9527600.0 6659400.0 6130200.0 9553800.0 9447800.0 7107500.0 8506100.0 8092300.0 6500600.0 False True 8814902.073923128 9069879.794780841 7088675.579416726 6712812.36488816 10305629.706313862 9388832.775716541 7825995.462515409 8476594.324438656 6622942.310282212 6443009.74139027 1.3681342148678874 1.4077085335624133 1.1002118363842694 1.0418752468686585 1.5995055292420086 1.4572122583335754 1.2146490191130332 1.3156264951742227 1.027926788273506 1.0 22.619303345341443 -7.777119178223485 5.775563827714811 1.0058307540241385 1.3117793891698064 0.37034998285539156 0.15608792807317562 0.193149302060172 20.566543089637083 0.14637934016426116 0.04239023499068479 1.6706320998803477e-08 7.777119178223485 0.30594863514566795 QHVIDGEK ddPTM_KYSE-520_SHP099_60min_R1 1 QHVIDGEK 8 0 Q9UQ80;Q9UQ80-2;F8VR77 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 67.563 0.02412 0.0 244960.0 257810.0 220310.0 170060.0 272900.0 250310.0 224020.0 200770.0 235860.0 234520.0 False True 231371.5804843467 245424.42061930048 234511.53510846323 186222.45126959676 294375.6774114021 248747.72244222002 246666.12782450975 200073.57573007012 193033.7695467494 232442.33525379896 0.9953934606263393 1.0558507784364095 1.0089019921969247 0.8011554825684587 1.2664460503289103 1.0701480957443383 1.0611927795131646 0.8607449908452087 0.8304587429651308 1.0 17.826513328456098 -7.261451365310142 24.999999109749815 0.8842013925517003 1.0376833991548284 0.23855604171040024 0.11387673695386201 1.5058215413954996 3130535.5069190953 0.058558410117457604 0.030954630314551958 5.477074328249092e-08 7.261451365310142 0.15348200660312816 QHVPEQHPK ddPTM_KYSE-520_SHP099_60min_R1 3 QHVPEQHPK 9 0 Q9H3U1;A0A1W2PNX8;Q9H3U1-2 Q9H3U1 UNC45A Protein unc-45 homolog A 0 ;; 93.05799999999999 0.0040742 1031890000.0 2015230.0 2111280.0 1471440.0 1327710.0 2257120.0 2080750.0 1503270.0 1975560.0 1789990.0 1516720.0 False True 1903441.1746385943 2009850.9397041118 1566291.376787242 1453895.1592094316 2434742.5027439464 2067763.2674349751 1655235.202101377 1968707.2434591698 1464972.9379758611 1503283.0407903038 1.2661894819474049 1.336974398811481 1.0419138208090297 0.9671466515348247 1.619616823099366 1.3754983002721255 1.1010802072450636 1.3096051708427334 0.9745157087687876 1.0 20.51968523732795 -7.767734128532433 24.956440104030413 0.9872576562030182 1.2498768303072545 0.26622195578430874 0.17594264451491154 229.08350734207198 908190.6034483041 0.1634911197685653 0.046344373937693306 1.7071271582103142e-08 7.767734128532433 0.2626191741042363 QHYIDLK ddPTM_KYSE-520_SHP099_60min_R1 4 QHYIDLK 7 0 Q32Q12;P22392-2;J3KPD9;P22392;F6XY72;O60361 Q32Q12 NME1-NME2;NME2;NME2P1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Putative nucleoside diphosphate kinase 0 ;;; 136.16 0.003048 9722140000.0 14946300.0 13831200.0 9300600.0 8222900.0 12595900.0 13392000.0 10162000.0 11857200.0 10741600.0 11388500.0 False True 14117198.944289623 13166728.39094553 9900131.557486158 9004401.943694966 13587125.669132581 13308415.56048984 11189274.13156264 11816070.140691284 8791196.213700345 11287606.750118917 1.2506813230484748 1.1664765332834452 0.8770797722362057 0.7977246322476731 1.2037206796728135 1.1790289877302498 0.9912884439781497 1.0468180192906524 0.7788361526333054 1.0 23.428236295960986 -4.591986408584333 6.172078216870543 0.9948094364515385 1.2309003008157207 0.3142001996208167 0.13425133747001433 0.23331451532535133 15.426541091909943 0.03658510573442505 0.10036790931464944 2.5586659601046134e-05 4.591986408584333 0.23609086436418214 QHYNCEHSK ddPTM_KYSE-520_SHP099_60min_R1 8 QHYNCEHSK 9 0 P50454;E9PR70;E9PPV6;E9PK86;E9PMI5;E9PNX1;E9PQ34;E9PIG2;E9PRS3 P50454 SERPINH1 Serpin H1 0 ;;;;;;; 179.42 3.2719e-05 20809740000.0 5679640.0 7124750.0 2650100.0 3407110.0 8776640.0 8445560.0 4657480.0 5352980.0 4250290.0 5859480.0 False True 5364579.047118365 6782466.31553222 2820929.686309921 3730920.710015026 9467311.635749381 8392848.12731859 5128303.531024447 5334411.761774919 3478544.4770917236 5807569.565806454 0.9237218747587099 1.1678665642622206 0.4857332580084556 0.6424237656974051 1.6301675818901233 1.4451567100863714 0.8830378134802966 0.9185273979639654 0.598967336968728 1.0 22.46950309974317 -6.978467019531111 24.988694018587367 0.8354046245638963 1.047483104871325 0.08083018470899517 0.331212031509324 702.635146242752 815395.7920050218 0.15360087093227842 0.10354870016842273 1.0508312523139953e-07 6.978467019531111 0.2120784803074286 QIANS(ph)QDGYVWQVTDMNR ddPTM_KYSE-520_SHP099_60min_R1 3 QIANSQDGYVWQVTDMNR 18 0 P10155-3;P10155-5;P10155-4;P10155;D6RDN1;D6RE09;P10155-2 P10155-3 TROVE2 60 kDa SS-A/Ro ribonucleoprotein 1 QIANS(1)QDGYVWQVTDMNR;QIANS(1)QDGYVWQVTDMNR;QIANS(1)QDGYVWQVTDMNR 299.93 2.5781e-38 966740000.0 548114.0 531311.0 493179.0 446604.0 430930.0 429946.0 423245.0 479385.0 510602.0 453425.0 True False 517709.0237818296 505786.0220459302 524970.1074542997 489049.1098836115 464841.7393436988 427262.54753362935 466030.7350731384 477722.12532430014 417889.54802895524 449408.00725931244 1.1519799723619675 1.1254495110811125 1.1681369690224217 1.0882073794502416 1.0343423611397313 0.9507230414946636 1.0369880543855874 1.0630031454883495 0.9298667163885872 1.0 18.777666304184688 -5.659680056631295 2.366626388497741 1.002162556090445 1.14572738528007 0.755519844460191 0.0378643045095587 0.14671040024838558 1.6747804866757519 0.012209646572666462 0.016643214016983317 2.189373934824973e-06 5.659680056631295 0.143564829189625 QIAQSKEDDDVIVNKPHVS(ph)DEEEEEPPFYHHPFK ddPTM_KYSE-520_SHP099_60min_R1 5 QIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFK 34 2 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;H7C1M2;H7C2G8;J3QSZ5 P18583-10 SON Protein SON 1 QIAQSKEDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;QIAQSKEDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;QIAQSKEDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;QIAQSKEDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK;QIAQSKEDDDVIVNKPHVS(1)DEEEEEPPFYHHPFK 222.12 2.5563e-22 16473700000.0 4615730.0 4546270.0 5012070.0 4274160.0 3850000.0 3662130.0 3149780.0 3529200.0 6006370.0 3235230.0 True False 4359686.25567036 4327860.365109602 5335156.05179554 4680374.881326942 4152973.0964965117 3639273.288271854 3468190.5012904378 3516958.0289214747 4915764.616266043 3206568.379170857 1.3596111918242244 1.3496859737102145 1.6638210762793981 1.4596211051445522 1.2951456527399465 1.1349432969874431 1.0815894411667686 1.0967980760263336 1.533029717438037 1.0 21.61259874189481 -5.938380339348671 3.16651820989047 1.1715841096168393 1.4651208206126045 0.4352294960181283 0.15481238776364517 0.24585608603735423 5.020267993408896 0.05201472226605234 0.05866975527493965 1.1524435475098468e-06 5.938380339348671 0.29353671099576517 QIASNS(ph)PGSSPK ddPTM_KYSE-520_SHP099_60min_R1 3 QIASNSPGSSPK 12 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 QIAS(0.002)NS(0.997)PGS(0.001)SPK;QIASNS(1)PGSSPK;QIASNS(1)PGSSPK 252.68 6.3985e-16 3474300000.0 3903290.0 4212590.0 3239590.0 2684010.0 2977150.0 4024960.0 3018540.0 3848090.0 4596290.0 3969730.0 True False 3686766.722684295 4010210.8531734934 3448419.1549272668 2939097.503422965 3211434.767333656 3999838.7316568927 3323683.4813114638 3834741.873940956 3761719.599041931 3934561.2806032067 0.9370210449788896 1.0192269397208853 0.8764431175408177 0.7469949744873138 0.8162116531684345 1.0165907826561233 0.8447405553693423 0.9746301049740043 0.9560709138237701 1.0 21.90777134772927 -7.530572833506694 1.2140602621136996 0.9958958801521145 0.8915143594028428 0.16606129341456988 0.08085860671097066 0.9279000787171805 2.4758078990617727 0.08079930999146519 0.027698079466199885 2.9473191539766025e-08 7.530572833506694 -0.10438152074927165 QICLVMLETLS(ph)QSPQGR ddPTM_KYSE-520_SHP099_60min_R1 1 QICLVMLETLSQSPQGR 17 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QICLVMLET(0.001)LS(0.602)QS(0.398)PQGR 86.641 0.035335000000000005 121330000.0 142270.0 161850.0 154070.0 106790.0 109500.0 129710.0 117970.0 148040.0 180740.0 184280.0 True False 134377.9994917862 154074.4830581973 164001.59872071617 116939.28949241567 118117.02703022525 128900.43177651844 129895.55887624931 147526.48379279565 147922.1720846245 182647.42256767055 0.7357234917563613 0.8435623174540718 0.8979135671074354 0.6402460426130013 0.6466941902038782 0.7057336477264609 0.7111819978085003 0.8077118292656845 0.8098782342785023 1.0 17.478701869663837 -8.225580404554512 1.324779886006915 0.9989047453350607 0.7434870124903861 0.4998604132897272 0.07666501199578143 0.7734885759313669 2.546266562428887 0.08205560526042911 0.024645660558857616 5.948666139528039e-09 8.225580404554512 -0.2554177328446746 QICLVMLETLSQS(ph)PQGR ddPTM_KYSE-520_SHP099_60min_R1 27 QICLVMLETLSQSPQGR 17 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QICLVMLETLSQS(1)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLET(0.001)LS(0.003)QS(0.997)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLS(0.005)QS(0.995)PQGR;QICLVMLETLS(0.003)QS(0.997)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLS(0.014)QS(0.986)PQGR;QICLVMLETLS(0.043)QS(0.957)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLS(0.001)QS(0.999)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLS(0.005)QS(0.995)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLS(0.008)QS(0.992)PQGR;QICLVMLETLSQS(1)PQGR;QICLVMLETLSQS(1)PQGR 364.0 6.0281e-72 17522253000.0 6734366.1 7436892.4 6391995.2 5116933.7 5356524.2 6497448.3 5081611.3 6436954.8 8022544.9 7447792.7 True False 6360797.387807005 7079612.92610093 6804033.438145928 5603245.540385789 5778052.180086358 6456895.31505363 5595310.161951038 6414626.506195337 6565852.978059241 7381811.050973032 0.8616852075844664 0.9590617908281103 0.9217295581209785 0.7590610897101191 0.7827418150082188 0.8747034122747582 0.7579860989822401 0.8689773365778299 0.8894637010783099 1.0 22.81554337933889 -10.43049628450524 14.691192989811622 1.0000000006383567 0.8514850332940441 0.3225644555513151 0.06395968629842701 1.4359696077508888e-09 6.796760071395987e-11 0.06700988169541024 0.016252283540607055 3.71110904423255e-11 10.43049628450524 -0.14851496734431258 QICVVMLETLSQS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 12 QICVVMLETLSQSPPK 16 0 Q15366;Q15366-2;Q15366-5;Q15366-8;H3BRU6;F8VZX2 Q15366;H3BRU6 PCBP2 Poly(rC)-binding protein 2 1 QICVVMLET(0.002)LS(0.011)QS(0.987)PPK;QICVVMLETLS(0.033)QS(0.967)PPK;QICVVMLETLS(0.002)QS(0.998)PPK;QICVVMLETLSQS(1)PPK;QICVVMLETLSQS(1)PPK;QICVVMLETLSQS(1)PPK;QICVVMLETLSQS(1)PPK;QICVVMLETLS(0.009)QS(0.991)PPK;QICVVMLETLSQS(1)PPK;QICVVMLETLSQS(1)PPK;QICVVMLETLSQS(1)PPK;QICVVMLETLSQS(1)PPK 332.96 1.7922e-58 5529002000.0 2323169.0 3181127.0 1959796.0 1901246.0 1906828.0 2732627.0 1857563.0 2413698.0 2474819.0 2354589.0 True False 2194298.184447416 3028300.8839510255 2086127.5859444684 2081939.8482095452 2056884.5152327912 2715571.661276479 2045343.5961078429 2405325.4449993484 2025454.2547100706 2333729.1733025247 0.9402539975717079 1.2976230997985054 0.8939030328837735 0.892108592559322 0.8813724140586703 1.1636190232963486 0.8764271448059333 1.030678911895979 0.8679045871650112 1.0 21.15420571691449 -4.793115454759509 24.998807831884168 0.9522230948469571 1.1189392858634446 0.24178601418173284 0.11911007690392197 227.38444387980513 179451.6713313314 0.029576355653476074 0.06157701563253179 1.6102175109523655e-05 4.793115454759509 0.1667161910164875 QIDNPDYK ddPTM_KYSE-520_SHP099_60min_R1 6 QIDNPDYK 8 0 P27797;K7EJB9;K7EL50 P27797 CALR Calreticulin 0 ;;;;; 152.79 0.0027316999999999997 3782780000.0 6635200.0 7944770.0 4885670.0 4310670.0 6698670.0 8148930.0 5664180.0 6787080.0 6511250.0 6674580.0 False True 6267132.22905673 7563091.323857113 5200608.105548388 4720354.780749811 7225817.218781376 8098069.505177896 6236770.591469653 6763537.203596372 5328971.135255119 6615448.413944662 0.9473480612208058 1.1432469653780264 0.7861308531385506 0.7135351204311117 1.09226416210126 1.2241149803402633 0.9427585556140388 1.0223852988316793 0.8055343798044309 1.0 22.657407519123446 -3.9382525046796366 16.913073895455007 0.9724026669137102 0.6699414515049303 0.0016993309555176639 0.1551150899229545 86405102.48022373 452737910.766093 0.04086632132302242 915620838.0861658 0.00011527828194322636 3.9382525046796366 -0.3024612154087799 QIDSS(ph)PVGGETDETTVSQNYR ddPTM_KYSE-520_SHP099_60min_R1 2 QIDSSPVGGETDETTVSQNYR 21 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 QIDSS(1)PVGGETDETTVSQNYR;QIDS(0.004)S(0.996)PVGGETDETTVSQNYR 359.78 4.0965e-73 0.0 222588.0 216956.0 213722.0 166370.0 186816.0 228250.0 190344.0 215990.0 264770.0 223683.0 True False 210240.59992182266 206533.108102405 227498.86208729036 182181.75477903563 201517.35636236158 226825.40708496142 209585.8290984218 215240.78110244512 216694.44230854293 221701.3426427405 0.948305487985311 0.9315825769951324 1.026150132315131 0.8217440300874114 0.908958664662197 1.0231124646388727 0.945352096654452 0.9708591681796613 0.9774160125756842 1.0 17.75825798175596 -6.242510187314361 24.899794220368214 0.9791519100237898 0.9272055224283237 0.23459968798007313 0.05029002175860501 1357.5228142443734 1785710.3249530364 0.017038613234220717 0.017009348640331316 5.721235341026824e-07 6.242510187314361 -0.051946387595466104 QIFEDHVFCHS(ph)L ddPTM_KYSE-520_SHP099_60min_R1 6 QIFEDHVFCHSL 12 0 Q13137-5;Q13137-2;Q13137;Q13137-3;Q13137-4 Q13137-5 CALCOCO2 Calcium-binding and coiled-coil domain-containing protein 2 1 QIFEDHVFCHS(1)L;QIFEDHVFCHS(1)L;QIFEDHVFCHS(1)L;QIFEDHVFCHS(1)L;QIFEDHVFCHS(1)L;QIFEDHVFCHS(1)L 185.27 7.1487e-08 1285572000.0 1724750.0 1714660.0 1569210.0 1495050.0 1636670.0 1487890.0 1438900.0 1525830.0 1854990.0 1610100.0 True False 1629074.6792961147 1632285.1598428676 1670363.787424773 1637139.1024968266 1765466.617621541 1478603.5266052263 1584358.0543107174 1520537.2518613974 1518170.5764925159 1595835.7666388452 1.0208285296971864 1.0228403160061967 1.0467015606141594 1.0258819464517797 1.1062959325319377 0.926538656117143 0.9928077108133112 0.9528156240437938 0.9513325921313895 1.0 20.60588075544121 -6.273800693856311 24.99558364183519 0.9635066933069051 1.0423927065565914 0.6374154929055189 0.030069191641668217 495.90484244477386 1002757.4845268223 0.010241972945226122 0.009096494415228085 5.323525100875685e-07 6.273800693856311 0.07888601324968636 QIFNGTFVK ddPTM_KYSE-520_SHP099_60min_R1 1 QIFNGTFVK 9 0 P18124;A8MUD9;C9JZ88;C9JIJ5 P18124 RPL7 60S ribosomal protein L7 0 102.07 0.016841 0.0 193150.0 202790.0 171180.0 143340.0 191740.0 211030.0 178130.0 180320.0 195790.0 184830.0 False True 182435.58446502095 193047.66400600443 182214.5366976841 156962.99050325755 206828.84714863382 209712.88349239598 196137.11878126874 179694.51200700458 160239.4714642505 183192.54999556413 0.9958679240473397 1.0537964781355953 0.994661282361626 0.8568197260590471 1.1290243361623713 1.14476753283621 1.0706610000571424 0.980905129664693 0.8747051747908449 1.0 17.483001308095464 -7.516343103075619 9.648030612851752 0.9340657697799989 1.0345832632968446 0.19466467567578538 0.08080491506302602 0.23984824927941895 295.84464197800355 0.05325205230408323 0.02246880989854361 3.045488030256605e-08 7.516343103075619 0.10051749351684569 QIHEHEQENELR ddPTM_KYSE-520_SHP099_60min_R1 2 QIHEHEQENELR 12 0 Q9H2K8 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 0 ; 191.53 8.6813e-08 64333000.0 34161.0 32368.0 24492.0 22100.9 34583.0 31756.0 22994.0 32036.0 27338.5 27212.0 False True 32266.02123173482 30812.992694641507 26070.793508585546 24201.36289112212 37304.48534964643 31557.799024709926 25318.45791981418 31924.874593258595 22374.517547501953 26970.922850615632 1.1963261847007332 1.1424522944693447 0.966625934640218 0.8973131184708315 1.3831371494503728 1.1700674537352582 0.9387316133024446 1.183677502252389 0.829579235068378 1.0 14.719117265944197 -7.760344073186851 24.999795007387327 0.914789606278241 1.104444045849545 0.2307872076209263 0.14213392351538717 44.215757260538055 1009405.6628359073 0.11254706426490127 0.03700357332673975 1.7364245877445074e-08 7.760344073186851 0.189654439571304 QILIACS(ph)PVSSVR ddPTM_KYSE-520_SHP099_60min_R1 6 QILIACSPVSSVR 13 0 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 QILIACS(0.985)PVS(0.014)SVR;QILIACS(0.999)PVS(0.001)SVR;QILIACS(0.998)PVS(0.001)SVR;QILIACS(0.93)PVS(0.053)S(0.016)VR;QILIACS(0.962)PVS(0.037)SVR;QILIACS(0.944)PVS(0.046)S(0.01)VR 177.3 3.1384e-07 9835060000.0 8470190.0 8880770.0 7050900.0 5477450.0 6416870.0 8037640.0 6088070.0 7099710.0 8945380.0 8084160.0 True False 8000331.675794859 8454124.47889246 7505412.295838886 5998025.201144601 6921841.162004045 7987474.107348822 6703511.529437385 7075082.763094771 7321124.486678969 8012540.631781318 0.9984762690702581 1.055111589120637 0.9367081729444298 0.748579692357971 0.8638759514739842 0.9968715884780576 0.8366274615629731 0.8830011713178502 0.9137082509934634 1.0 22.933828337014464 -4.939824886184835 5.596860413011263 0.8846099872021145 1.0231657062122115 0.36023375823812065 0.07054500150045159 0.19555852475913743 12.247968152794323 0.01864970468968391 0.039649913921756354 1.1486166669868497e-05 4.939824886184835 0.138555719010097 QILIACSPVS(ph)SVR ddPTM_KYSE-520_SHP099_60min_R1 4 QILIACSPVSSVR 13 0 Q5QJE6;J3KP30;E9PRB3 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 QILIACS(0.258)PVS(0.733)S(0.009)VR;QILIACS(0.448)PVS(0.552)SVR;QILIACS(0.402)PVS(0.597)SVR;QILIACS(0.05)PVS(0.938)S(0.013)VR 261.79 4.3481e-22 21790500000.0 9880950.0 10373750.0 8328880.0 5633590.0 6825110.0 8770110.0 7140100.0 8298550.0 9000020.0 9072610.0 True False 9332834.006314512 9875379.478683788 8865772.931479188 6169004.699799403 7362207.3274361845 8715372.490382882 7861890.9886607425 8269764.266946136 7365843.240041286 8992233.733783774 1.0378771596262122 1.0982120539840996 0.9859366642317722 0.6860369606077392 0.8187295332166924 0.9692110712869122 0.8742978909815989 0.9196562847200775 0.8191338724179124 1.0 23.100248105126365 -5.008773502560343 22.847578238876586 0.8659640364443933 1.0615522191193603 0.4835100154585761 0.08383332720439127 108.706116581094 283096.981759092 0.02257702104036901 0.04341887022729313 9.800009516870156e-06 5.008773502560343 0.19558818267496692 QIS(ph)LPDLSQEEPQLK ddPTM_KYSE-520_SHP099_60min_R1 9 QISLPDLSQEEPQLK 15 0 H0YBZ4;Q15390-2;Q15390 H0YBZ4 MTFR1 Mitochondrial fission regulator 1 1 QIS(0.998)LPDLS(0.002)QEEPQLK;QIS(1)LPDLSQEEPQLK;QIS(1)LPDLSQEEPQLK;QIS(1)LPDLSQEEPQLK;QIS(1)LPDLSQEEPQLK;QIS(1)LPDLSQEEPQLK;QIS(1)LPDLSQEEPQLK;QIS(1)LPDLSQEEPQLK;QIS(1)LPDLSQEEPQLK 350.42 7.259800000000001e-55 2972165000.0 4308380.0 4135330.0 3423627.0 2609329.0 2701556.0 3843392.0 3142820.0 3619254.0 4535190.0 3700215.0 True False 4069385.5728573953 3936662.5395431253 3644319.4744168785 2857318.84363663 2914153.0874490156 3819403.9648941257 3460526.916567383 3606699.652614237 3711713.8188362764 3667433.9738237117 1.1096002278166726 1.0734106101544107 0.9936973645410353 0.7791057355171835 0.7946027408397168 1.0414376897185058 0.9435826087850179 0.9834395597458698 1.0120737947373046 1.0 21.806339562081856 -4.846686739494179 3.626431676370107 0.9317840265338796 1.0950763558937497 0.34949875504712835 0.08323544089675569 0.2571748242316578 6.517962273440831 0.024293433971294735 0.05895428066177682 1.4233550957348865e-05 4.846686739494179 0.16329232935987015 QIS(ph)PQEFIHELK ddPTM_KYSE-520_SHP099_60min_R1 3 QISPQEFIHELK 12 0 Q9NSV4-7;Q9NSV4-6;Q9NSV4-5;Q9NSV4-4;Q9NSV4 Q9NSV4-7 DIAPH3 Protein diaphanous homolog 3 1 QIS(1)PQEFIHELK;QIS(1)PQEFIHELK;QIS(1)PQEFIHELK 159.81 1.7748e-05 70477000.0 208618.0 223998.0 201099.0 205610.0 201785.0 208669.0 200538.0 194956.0 252720.0 206908.0 True False 197045.54367032752 213236.7998521473 214062.1633097767 225151.11258109938 217664.33150040192 207366.61936916446 220810.3381022743 194279.7431390725 206832.41855276233 205074.956091988 0.9608464506116543 1.0397993197984559 1.04382401142028 1.0978966757896371 1.061389141064923 1.0111747593214089 1.076729905543552 0.9473596720017182 1.0085698541365822 1.0 17.645791794007092 -7.259809808224442 24.997358457595908 0.983473572968812 1.0434255650490691 0.31433871486464104 0.03805110573940323 173.0815296873567 2655114.3677420937 0.019226968801061384 0.01034345421660599 5.4978158850678413e-08 7.259809808224442 0.059951992080257144 QISGQYSGS(ph)PQLLK ddPTM_KYSE-520_SHP099_60min_R1 2 QISGQYSGSPQLLK 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 QISGQYS(0.469)GS(0.531)PQLLK;QISGQYS(0.233)GS(0.767)PQLLK 234.02 2.7581999999999997e-18 1084550000.0 1649780.0 1783610.0 1330400.0 1297260.0 1287740.0 1479120.0 1198440.0 1437670.0 1673520.0 1441860.0 True False 1558263.4146451042 1697922.6983468109 1416159.7127152635 1420551.2003645585 1389077.811761666 1469888.263428294 1319590.0108472693 1432683.058324699 1369650.9540060908 1429086.2421501055 1.0903914464256876 1.1881177274453587 0.9909546890498409 0.9940276230126561 0.9720041875651637 1.0285511259396078 0.9233802495095778 1.0025168643210658 0.958410285963853 1.0 20.446661551795643 -4.7747406485708375 24.817654982462503 0.983214792822661 1.1392545634430007 0.7635634811344514 0.034616251530808204 75.13672842387604 140191.614118818 0.008386373031234485 0.01762396410196608 1.679806863590996e-05 4.7747406485708375 0.1560397706203397 QISLPDLS(ph)QEEPQLK ddPTM_KYSE-520_SHP099_60min_R1 1 QISLPDLSQEEPQLK 15 0 H0YBZ4;Q15390-2;Q15390 H0YBZ4 MTFR1 Mitochondrial fission regulator 1 1 QIS(0.332)LPDLS(0.668)QEEPQLK 141.08 6.730600000000001e-05 43338000.0 305530.0 330270.0 271890.0 204850.0 231850.0 306040.0 242030.0 277350.0 385660.0 286130.0 True False 288581.64184104506 314403.33345462335 289416.464439381 224318.88240960165 250095.27595395208 304129.89084022644 266496.75438517093 276387.9375839767 315633.8656974454 283595.11080577126 1.0175832757522008 1.1086345337947383 1.020526988695502 0.790982897315297 0.8818744273953207 1.0724087942705016 0.9397085641849776 0.9745863981881882 1.1129735798358558 1.0 18.113473135092274 -9.29444574767021 13.428515334631951 0.9999999999999895 0.9866635583485187 0.0 0.09586889956847343 0.0 0.0 0.09911771220335173 0.024039576281411287 5.076381495333645e-10 9.29444574767021 -0.013336441651470743 QIT(ph)MEELVR ddPTM_KYSE-520_SHP099_60min_R1 6 QITMEELVR 9 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 QIT(1)MEELVR;QIT(1)MEELVR;QIT(1)MEELVR;QIT(1)MEELVR;QIT(1)MEELVR;QIT(1)MEELVR 140.01 0.0019887 2044010000.0 1902178.0 2303751.0 1647868.0 1603443.0 1985992.0 1795581.0 1742721.0 2092928.0 1906204.0 1980143.0 True False 1796660.3944421688 2193075.3439592486 1754092.207962023 1755833.740627282 2142278.2716512475 1784374.1129420474 1918892.2459979348 2085668.1212610672 1560085.4050923947 1962600.4735479401 0.9154488744182411 1.1174334122087832 0.8937591892001427 0.8946465489499906 1.0915508788085078 0.9091886693150035 0.9777294318741345 1.062706419045466 0.7949072804777791 1.0 20.90433508268076 -7.7521298793586215 24.999998753877378 0.8974536064972698 0.9823899340540155 0.12306668482077399 0.09113215694045972 357.69996485839596 960595.7672157631 0.060221766024908335 0.02207760813979873 1.769579671733408e-08 7.7521298793586215 0.08493632755674574 QIT(ph)QEEDDSDEEVAPENFFSLPEK ddPTM_KYSE-520_SHP099_60min_R1 1 QITQEEDDSDEEVAPENFFSLPEK 24 0 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 QIT(0.522)QEEDDS(0.478)DEEVAPENFFSLPEK 145.67 1.2212e-06 623530000.0 229190.0 155650.0 148330.0 142540.0 153070.0 173370.0 120470.0 157200.0 202130.0 191290.0 True False 216476.37382106233 148172.34036458685 157891.58913639138 156086.95874378624 165115.7381508366 172287.93352166362 132648.28327389827 156654.70989075585 165428.28728264448 189595.319421368 1.1417812131741092 0.7815189785106443 0.8327821046335202 0.8232637768704048 0.8708850970306576 0.9087140655553874 0.6996390189311201 0.8262583188701881 0.8725336036117365 1.0 17.53256382300351 -4.2549029186874305 24.868676564391933 0.8377602259095577 1.1417813611238665 0.5809357686725478 0.07501360694456212 475.8416292700372 1810340.1477734859 0.01785617837106775 0.166374188106595 5.560285368769764e-05 4.2549029186874305 0.30402113521430885 QITQEEDDS(ph)DEEVAPENFFSLPEK ddPTM_KYSE-520_SHP099_60min_R1 9 QITQEEDDSDEEVAPENFFSLPEK 24 0 Q92733 Q92733 PRCC Proline-rich protein PRCC 1 QIT(0.226)QEEDDS(0.774)DEEVAPENFFSLPEK;QIT(0.078)QEEDDS(0.922)DEEVAPENFFSLPEK;QIT(0.259)QEEDDS(0.741)DEEVAPENFFSLPEK;QIT(0.003)QEEDDS(0.997)DEEVAPENFFSLPEK;QIT(0.144)QEEDDS(0.856)DEEVAPENFFSLPEK;QIT(0.008)QEEDDS(0.992)DEEVAPENFFSLPEK;QIT(0.054)QEEDDS(0.946)DEEVAPENFFSLPEK;QIT(0.015)QEEDDS(0.985)DEEVAPENFFSLPEK;QIT(0.022)QEEDDS(0.978)DEEVAPENFFSLPEK 165.9 4.8748e-12 4255670000.0 1462717.0 1361703.0 1135263.0 1093855.0 1100093.0 1260020.0 1226368.0 1183745.0 1532540.0 1279712.0 True False 1381577.1721559505 1296284.7439221274 1208443.8694650251 1197814.6503205006 1186664.060427049 1252155.7477993122 1350341.2456382816 1179638.864883159 1254269.368189501 1268374.74728087 1.0892499831912947 1.0220045350958702 0.9527498651764202 0.9443696769337016 0.9355784345052661 0.987212770108891 1.0646232499764998 0.9300396964004982 0.9888791706697031 1.0 20.274549628813816 -4.432095913289351 2.9776906170254893 0.9741954598584596 1.0909869595863402 0.4655557247987092 0.03767427871547294 0.2707554974807387 4.04805074779761 0.010217610969955509 0.06041375717259619 3.6974651279605e-05 4.432095913289351 0.11679149972788061 QITT(ph)SPITVR ddPTM_KYSE-520_SHP099_60min_R1 5 QITTSPITVR 10 0 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 QIT(0.033)T(0.482)S(0.482)PIT(0.002)VR;QIT(0.241)T(0.473)S(0.23)PIT(0.057)VR;QIT(0.188)T(0.644)S(0.168)PITVR;QIT(0.048)T(0.694)S(0.258)PITVR;QIT(0.093)T(0.453)S(0.453)PITVR 198.97 7.684600000000001e-06 8016340000.0 10228420.0 10651720.0 9123420.0 7678330.0 8001810.0 10178670.0 8090320.0 9545590.0 11357220.0 10111380.0 True False 9661029.152750233 10139995.382642321 9711530.251188127 8408076.1746259 8631506.92292902 10115141.144944074 8908168.499514272 9512478.576247446 9295035.14021764 10021801.039734598 0.9640012922274179 1.0117937227489455 0.969040416256888 0.8389785569768771 0.8612730275433211 1.0093137056741996 0.8888790013087491 0.9491785496970273 0.9274815079010783 1.0 23.2566384659185 -5.016061831305219 24.483578001247714 0.9208452405887594 0.9885274173671621 0.20006174531493004 0.0523016791201668 752.5453812797293 1147135.252547802 0.014112683531770719 0.025397418188897458 9.636918112786338e-06 5.016061831305219 0.06768217677840271 QIVDT(ph)PPHVAAGLK ddPTM_KYSE-520_SHP099_60min_R1 2 QIVDTPPHVAAGLK 14 0 Q5W012;Q96I25;Q5W011;Q5W010 Q5W012 RBM17 Splicing factor 45 1 QIVDT(1)PPHVAAGLK;QIVDT(1)PPHVAAGLK 152.71 2.5777999999999997e-06 1204680000.0 3033160.0 3212230.0 2401050.0 2485020.0 2553400.0 3373140.0 2849060.0 3427450.0 3373800.0 3551800.0 True False 2864904.5683454466 3057909.6491444716 2555825.5248158304 2721195.5536514926 2754338.0531413443 3352086.9820572515 3137070.7889460623 3415560.975922842 2761202.9665768836 3520333.815258585 0.8138161659351063 0.868641955456106 0.7260179457237333 0.7729936126672715 0.7824082026547887 0.9522071365868537 0.8911287831138905 0.9702378112889142 0.7843582772203835 1.0 21.74728080806853 -6.253827421735169 24.801145913737503 0.9159476642749137 0.7921826141004832 0.4982633325847201 0.06357222113327744 459.7533899861119 1497961.453526241 0.020614779521386174 0.02023572442079473 5.574072052519042e-07 6.253827421735169 -0.12376505017443051 QIVSGSR ddPTM_KYSE-520_SHP099_60min_R1 2 QIVSGSR 7 0 P63244;H0Y8W2;J3KPE3;H0YAM7;H0YAF8;D6R9L0;D6R9Z1;D6RHH4;D6RFX4;D6RFZ9;E9PD14;D6RAU2 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 ; 107.9 0.025687 720000000.0 438350.0 528420.0 382390.0 250400.0 433410.0 447970.0 282680.0 466080.0 438900.0 424310.0 False True 414033.85167093924 503033.91002540966 407039.47124563257 274197.94071449456 467516.90123442956 445174.05306396616 311256.0530909397 464463.2772638893 359206.82376862725 420550.94350818463 0.9845034425963223 1.196130737049743 0.9678719725371652 0.651996969563708 1.111677214024205 1.0585496476369274 0.7401149798749225 1.104416205535989 0.8541339148407747 1.0 18.68192104660563 -4.964122385015706 14.251146349828154 0.9306689639547396 1.0882937835416553 0.1476087926512869 0.15044604851960164 3.6249040931539094 1435.1306893501835 0.03856643546296425 0.08026102311809286 1.0861195099319838e-05 4.964122385015706 0.15762481958691565 QIWLGLFDDR ddPTM_KYSE-520_SHP099_60min_R1 1 QIWLGLFDDR 10 0 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 0 95.573 0.021306 23362000.0 28015.0 41280.0 31705.0 30523.0 36575.0 31039.0 22652.0 23014.0 32352.0 24130.0 False True 26460.952103482075 39296.846837456746 33748.75502979361 33423.89674292541 39453.24441671686 30845.274087667538 24941.88522221581 22934.169805507983 26477.692327552115 23916.226972855937 1.1064016131605672 1.6431039428609397 1.4111237139577761 1.397540539352647 1.6496433346904962 1.2897215820319745 1.0428854539022379 0.9589376213705216 1.107101565711153 1.0 14.545702187275378 -6.63981500625814 3.4825537336373764 1.0214619000935539 1.4505327789266602 0.6396784702282942 0.1462454130547048 0.1431706451752463 3.3784931882981994 0.05730395382232406 0.04277929045670962 2.2918436873954132e-07 6.63981500625814 0.42907087883310635 QIYYSDKYDDEEFEYR ddPTM_KYSE-520_SHP099_60min_R1 2 QIYYSDKYDDEEFEYR 16 1 P61024;Q5T179 P61024 CKS1B Cyclin-dependent kinases regulatory subunit 1;Cyclin-dependent kinases regulatory subunit 0 ; 120.29 0.00015702 6730700000.0 4501400.0 4101500.0 2559670.0 2836080.0 3567000.0 3975900.0 3354200.0 3175800.0 2795370.0 3342800.0 False True 4251698.368681564 3904457.7835229854 2724670.4238168052 3105620.190501456 3847702.6065462427 3951084.933314783 3693275.269837376 3164783.891037291 2287801.27354319 3313185.3926590458 1.2832660611452535 1.1784604001255135 0.8223718569609173 0.9373517695033041 1.1613303061976294 1.1925336089157939 1.114720376958225 0.9552088144688297 0.6905141132796924 1.0 21.6597875024704 -7.486390222250045 4.691905101862927 0.8365186080509885 1.0889607740713183 0.3389780738555711 0.14322676033083978 0.23392454309249852 12.32677150396625 0.09558265084978947 0.04029730846555644 3.262945182882236e-08 7.486390222250045 0.25244216602032976 QIYYSDKYFDEHYEYR ddPTM_KYSE-520_SHP099_60min_R1 1 QIYYSDKYFDEHYEYR 16 1 P33552 P33552 CKS2 Cyclin-dependent kinases regulatory subunit 2 0 164.53 5.4151999999999994e-08 855780000.0 347940.0 343910.0 238710.0 267220.0 351990.0 329450.0 239110.0 236310.0 252270.0 224770.0 False True 328639.07459880563 327388.0473805658 254097.62854950395 292616.5084573778 379689.61045085866 327393.7803467278 263281.57228871714 235490.29576516847 206464.1272091858 222778.71266841408 1.475181675405204 1.4695661154477233 1.1405830723499386 1.3134850495922872 1.7043352387801622 1.4695918493524278 1.1818075844642657 1.057059235797248 0.926767754136765 1.0 17.765251858843 -7.029528666565236 2.5548784620322724 0.9896391113353711 1.4237690780295933 0.6700135847745319 0.13747508202809036 0.1975287995618029 2.5532046199778065 0.08244373543626671 0.044863227904101535 9.342676978218067e-08 7.029528666565236 0.4341299666942222 QKDFLDGVYAFEYYPS(ph)TPGR ddPTM_KYSE-520_SHP099_60min_R1 3 QKDFLDGVYAFEYYPSTPGR 20 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 1 QKDFLDGVYAFEY(0.007)Y(0.007)PS(0.493)T(0.493)PGR;QKDFLDGVYAFEY(0.009)Y(0.064)PS(0.463)T(0.463)PGR;QKDFLDGVYAFEYYPS(0.5)T(0.5)PGR 122.04 3.5102e-05 2545870000.0 953150.0 950290.0 897340.0 853990.0 897720.0 961190.0 932090.0 961890.0 1107760.0 913930.0 True False 900276.8694425807 904636.6419856305 955183.9721947644 935152.9528385452 968365.456671909 955190.8566746739 1026314.7535217707 958553.4280968133 906618.7083571075 905833.2912267797 0.9938659554268823 0.9986789520182808 1.0544809750822346 1.0323676132194894 1.069032752550352 1.0544885752444013 1.1330062203077365 1.0582007057817826 1.000867065869553 1.0 19.788886036793688 -4.753649540359902 5.287235809878094 1.0557186504778553 0.9950454662229048 0.25749404586808555 0.03580605798326832 0.20402952885972342 16.839778259513242 0.009523993756602402 0.02381355858583112 1.7633984699844168e-05 4.753649540359902 -0.060673184254950496 QKDFLDGVYAFEYYPST(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 4 QKDFLDGVYAFEYYPSTPGR 20 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 1 QKDFLDGVYAFEYYPS(0.212)T(0.788)PGR;QKDFLDGVYAFEYYPS(0.233)T(0.767)PGR;QKDFLDGVYAFEYYPS(0.01)T(0.99)PGR;QKDFLDGVYAFEYYPS(0.326)T(0.674)PGR 221.42 1.6253999999999998e-18 2367170000.0 2671160.0 2616370.0 2365170.0 2448190.0 2454490.0 2398270.0 2201820.0 2434860.0 3031110.0 2275150.0 True False 2522985.429974557 2490675.657948563 2517632.642605802 2680865.2415248365 2647644.3988622655 2383301.5073369117 2424401.4532923894 2426414.0389605965 2480736.8320649858 2254993.941039918 1.1188435516642903 1.1045154546180098 1.116469803659324 1.1888569599830157 1.1741248393959196 1.0568992953647685 1.0751254844500147 1.0760179860357524 1.100107981186399 1.0 21.104692126421945 -6.273340760714922 24.920184777782968 1.067224728116471 1.1399041139463486 0.5693896900240938 0.034145779462970996 628.6287175437186 1316276.408465398 0.012613368596012574 0.011214281518079208 5.329165887688372e-07 6.273340760714922 0.07267938582987754 QKDLEDHRDDK ddPTM_KYSE-520_SHP099_60min_R1 1 QKDLEDHRDDK 11 2 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2;G3XAL2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 0 139.78 0.00013738 772710000.0 689950.0 853470.0 622380.0 540920.0 664520.0 797600.0 629590.0 819510.0 826360.0 536510.0 False True 651677.0981187745 812468.0201154127 662499.6106432098 592328.8741664712 716813.9433984051 792621.8825453026 693235.1014062715 816667.3110850728 676313.8548403796 531756.9387984644 1.2255168678969695 1.5278935935490212 1.2458692351813332 1.113909064364769 1.3480105121300114 1.4905717720135025 1.303669121784619 1.5357906056296697 1.27184772871709 1.0 19.020407428207754 -8.02240830616611 24.07290967810171 0.9999999915683394 1.3503516875961448 0.39156910591477256 0.1304456074272963 1230.9874467915142 1322431.2621034428 0.12820560636752446 0.03310254520735944 9.497114933350515e-09 8.02240830616611 0.35035169602780536 QKDS(ph)DSES(ph)EER ddPTM_KYSE-520_SHP099_60min_R1 2 QKDSDSESEER 11 1 Q96ST2;B8ZZB6 Q96ST2 IWS1 Protein IWS1 homolog 2 QKDS(0.972)DS(0.083)ES(0.945)EER;QKDS(0.983)DS(0.23)ES(0.787)EER 145.46 0.00010922 326940000.0 1397140.0 971590.0 971320.0 1254600.0 1246190.0 1195320.0 1627370.0 1085020.0 1310360.0 1084590.0 True False 1319637.8590704587 924913.3580136787 1033932.8413669495 1373836.8067907558 1344258.0631488282 1187859.5644985598 1791880.4412006626 1081256.3188655728 1072431.6554874869 1074981.3763982512 1.2275913685983422 0.8603994248836396 0.9618146547163118 1.2780098678488983 1.2504942807965609 1.105004784807072 1.666894404444845 1.0058372569098322 0.9976281255036183 1.0 20.03588023526856 -3.9278631374098065 21.149498552329092 1.139243960223782 4.1938918042696764 0.01577203668018734 0.2185627222199909 4423.861864187704 1391641.6328846451 0.054891488037269884 46621.62532079949 0.00011806926578689382 3.9278631374098065 3.0546478440458946 QKDYETATLSEIK ddPTM_KYSE-520_SHP099_60min_R1 1 QKDYETATLSEIK 13 1 P12814-3;P12814;P12814-2;P12814-4;H9KV75;H7C5W8 P12814-3 ACTN1 Alpha-actinin-1 0 144.68 1.0383e-05 197120000.0 226590.0 220360.0 180460.0 160760.0 184900.0 207490.0 162860.0 160790.0 215780.0 165650.0 False True 214020.60100403358 209773.57483289682 192092.74034620888 176038.5820657437 199450.57806291006 206194.97794549246 179323.4781604302 160232.2570186681 176599.79137114243 164182.4698737497 1.3035533036420244 1.2776855835717722 1.169995435529269 1.0722130212872965 1.2148104375350197 1.2558891220484674 1.0922206146510245 0.9759401057974145 1.07563122607999 1.0 17.324940570028 -1.0000000000000002 0.1401573860681795 0.9372864284635358 2.2199885824513226 0.6171221595179757 0.06863247404200903 55.71046432326621 0.5210957735193592 0.33114962029738887 14.321379105097773 0.09999999999999995 1.0000000000000002 1.2827021539877868 QKEDVEVVGGS(ph)DGEGAIGLSSDPK ddPTM_KYSE-520_SHP099_60min_R1 8 QKEDVEVVGGSDGEGAIGLSSDPK 24 1 Q8NHZ8 Q8NHZ8 CDC26 Anaphase-promoting complex subunit CDC26 1 QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(1)DGEGAIGLSSDPK;QKEDVEVVGGS(1)DGEGAIGLSSDPK 199.97 1.2024000000000002e-15 17458800000.0 10163350.0 9276240.0 8938790.0 8695390.0 8816960.0 9030860.0 8248430.0 8786130.0 10677200.0 9334990.0 True False 9599568.71536407 8830595.5064799 9514998.705969684 9521797.251235658 9510804.590359963 8974495.052912563 9082261.801319165 8755652.965728162 8738489.630308462 9252289.251112312 1.0375344365947063 0.95442276682155 1.0283939950132654 1.029128791027685 1.0279406892966054 0.9699756254198005 0.9816232020877745 0.9463228751387723 0.9444678385144433 1.0 23.141378938478375 -6.3257886473501745 6.396200821250211 0.9655831807156989 1.0135173888582383 0.4379678049651401 0.026487116934831946 0.23641501566293363 18.93114856130298 0.009539387098971326 0.008421422421669536 4.722928301743231e-07 6.3257886473501745 0.04793420814253935 QKEEEEAT(ph)AS(ph)ERNDADEKHPEHAEQNIR ddPTM_KYSE-520_SHP099_60min_R1 2 QKEEEEATASERNDADEKHPEHAEQNIR 28 3 A0A0A0MRK1;E9PAV9;Q5T3I0;Q5T3I0-3;F8W895 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 2 QKEEEEAT(1)AS(1)ERNDADEKHPEHAEQNIR;QKEEEEAT(1)AS(1)ERNDADEKHPEHAEQNIR 71.735 0.010834 1021800000.0 113533.0 89956.0 110233.0 112890.0 96819.0 91042.0 93784.0 105638.0 125340.0 70171.0 True False 107235.09816757558 85634.37873329123 117338.79555903602 123619.03165838402 104438.1044752456 90473.7731076848 103264.60196363635 105271.56643409464 102581.41556427372 69549.33953221183 1.541856455989917 1.2312752257500534 1.6871302638997812 1.7774292680540809 1.5016404926012994 1.3008574016117262 1.4847675428435847 1.51362424348168 1.4749444962991065 1.0 16.08574919398444 -6.011610863443919 24.320033141725883 1.395748353280014 1.5569092844032766 0.19299974152139077 0.1911969970977323 847.1413238982434 1774420.469573928 0.06265531962338729 0.0662154160582417 9.736192153793128e-07 6.011610863443919 0.16116093112326269 QKEEEEATAS(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 2 QKEEEEATASER 12 1 A0A0A0MRK1;E9PAV9;Q5T3I0;Q5T3I0-3;F8W895 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 QKEEEEAT(0.138)AS(0.862)ER;QKEEEEAT(0.02)AS(0.98)ER 68.919 0.01674 28376000.0 66380.0 51443.0 52484.0 51081.0 57644.0 58382.0 60113.0 70120.0 67348.0 58041.0 True False 62697.76907475065 48971.60106248275 55867.20261736911 55935.72288193732 62180.254850505095 58017.61628229666 66189.80868634382 69876.77008613112 55119.30090492027 57526.801895214696 1.0898879654209683 0.8512832184150393 0.9711508510264737 0.9723419526054041 1.080891911282791 1.0085319254836378 1.150590794303303 1.2146819879438446 0.9581499247137064 1.0 15.81194664782197 -5.774764176655674 1.9956041999232053 1.0854752444545883 0.9573883508337718 0.20135280317924542 0.08940109829699588 0.4290235237827005 3.5182922752455212 0.03033077757219302 0.039052294381648665 1.6797158618180412e-06 5.774764176655674 -0.1280868936208165 QKEEEEATAS(ph)ERNDADEKHPEHAEQNIR ddPTM_KYSE-520_SHP099_60min_R1 2 QKEEEEATASERNDADEKHPEHAEQNIR 28 3 A0A0A0MRK1;E9PAV9;Q5T3I0;Q5T3I0-3;F8W895 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 1 QKEEEEAT(0.147)AS(0.853)ERNDADEKHPEHAEQNIR;QKEEEEAT(0.047)AS(0.953)ERNDADEKHPEHAEQNIR 217.1 1.1301e-22 1540740000.0 1050550.0 947580.0 1071300.0 1022730.0 931550.0 872760.0 1064390.0 1100900.0 1247830.0 707090.0 True False 992273.8972804953 902056.8344534233 1140357.7121406063 1119929.9517050125 1004857.6852055378 867312.7811061153 1171988.9286453424 1097081.2348519904 1021255.5272344635 700825.7327076949 1.4158639601413716 1.2871342936684935 1.627163014883522 1.5980148836402963 1.4338196192128845 1.2375584123533603 1.6722972258984723 1.5654123181426736 1.4572175072521425 1.0 19.41869622278944 -8.06168874415828 20.823652349390976 0.9999999988878064 1.4809502549798697 0.5300175003882064 0.13494129851646328 2818.6249561118366 951455.0357739115 0.13619439029237898 0.035165240366520904 8.675834440291701e-09 8.06168874415828 0.4809502560920632 QKEENNTDLPYLEESTLTTAALS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 QKEENNTDLPYLEESTLTTAALSPSK 26 1 A0A087WU78;A0A087WWC4;Q6T4R5-4;Q6T4R5-3;Q6T4R5-2;Q6T4R5 A0A087WU78 NHS Nance-Horan syndrome protein 1 QKEENNTDLPYLEESTLTTAALS(1)PSK 252.78 8.6167e-30 518410000.0 167100.0 166690.0 149730.0 111390.0 114790.0 231960.0 123750.0 156820.0 249830.0 194620.0 True False 157830.62989440828 158681.96219320912 159381.83537647044 121976.47210937536 123823.31993424275 230512.2515988069 136259.85768361329 156276.0280220631 204467.16970179125 192895.8182120686 0.8182169595863926 0.8226303901453946 0.8262586346026792 0.6323437866095941 0.6419181145654079 1.1950090662172002 0.706390936551097 0.810157677188492 1.0599875704770394 1.0 17.557462341980877 -6.209588919259449 24.999998140926294 0.9269505557962862 0.75029649961712 0.34028634456706186 0.1408730353895495 481.256089096496 232040.20045148264 0.04735853346101264 0.047358495943149705 6.171789151723265e-07 6.209588919259449 -0.17665405617916619 QKFNDS(ph)EGDDTEETEDYR ddPTM_KYSE-520_SHP099_60min_R1 12 QKFNDSEGDDTEETEDYR 18 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2 Q9NYF8-3;Q9NYF8 BCLAF1 Bcl-2-associated transcription factor 1 1 QKFNDS(1)EGDDTEETEDYR;QKFNDS(1)EGDDTEETEDYR;QKFNDS(1)EGDDTEETEDYR;QKFNDS(1)EGDDTEETEDYR;QKFNDS(1)EGDDTEETEDYR;QKFNDS(1)EGDDTEETEDYR;QKFNDS(1)EGDDTEETEDYR;QKFNDS(1)EGDDTEETEDYR;QKFNDS(0.999)EGDDT(0.001)EETEDYR;QKFNDS(1)EGDDTEETEDYR;QKFNDS(1)EGDDTEETEDYR;QKFNDS(1)EGDDTEETEDYR 251.51 2.8266e-24 27874030000.0 16712640.0 15789880.0 14815380.0 13684210.0 14631090.0 14473500.0 13402850.0 13884910.0 17800090.0 13760180.0 True False 15785556.543378122 15031310.46370691 15770403.100246143 14984753.204092225 15782473.543485483 14383165.517827787 14757740.877210645 13836746.487972364 14568042.359753242 13638275.510458047 1.1574452012846863 1.1021415759038349 1.1563341045686566 1.0987278554830249 1.1572191463197259 1.054617609594303 1.0820826185755064 1.0145524980311569 1.0681733440992767 1.0 23.70115789876457 -6.723661204961214 0.80934399393071 1.019686547753792 1.1370016801282026 0.6949310810629596 0.029880424993508438 0.3473866402343618 0.45083299445132885 0.02218009292351406 0.01376125445922288 1.8894647540961476e-07 6.723661204961214 0.1173151323744106 QKGDGRPET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 QKGDGRPETPK 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 QKGDGRPET(1)PK;QKGDGRPET(1)PK;QKGDGRPET(1)PK;QKGDGRPET(1)PK;QKGDGRPET(1)PK;QKGDGRPET(1)PK;QKGDGRPET(1)PK;QKGDGRPET(1)PK 91.20700000000001 0.0022291999999999998 13978380000.0 6937940.0 6327470.0 5288270.0 5522650.0 6349120.0 6023400.0 5699280.0 5767870.0 7073550.0 5505440.0 True False 6553078.63775949 6023488.8434738945 5629160.345731166 6047520.99555474 6848759.622448816 5985805.726333223 6275418.842012631 5747862.605200982 5789171.629684599 5456666.08476751 1.2009308497092495 1.103877120186755 1.0316116577932413 1.1082813024672011 1.2551179632500122 1.0969712335967976 1.1500463368155696 1.0533652812742853 1.0609356592013741 1.0 22.37958833145338 -7.617400515585803 1.4622861880309326 1.0102212607884105 1.1328563212212321 0.36383277274455794 0.05907097622819065 0.4809322329814125 1.8910228397780715 0.05709800660131878 0.018246536359265125 2.413234272063e-08 7.617400515585803 0.12263506043282169 QKGESRPET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 QKGESRPETPK 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 QKGES(0.046)RPET(0.954)PK;QKGES(0.002)RPET(0.998)PK;QKGES(0.001)RPET(0.999)PK;QKGES(0.007)RPET(0.993)PK;QKGES(0.001)RPET(0.999)PK;QKGES(0.003)RPET(0.997)PK;QKGES(0.005)RPET(0.995)PK;QKGES(0.004)RPET(0.996)PK;QKGES(0.048)RPET(0.952)PK;QKGES(0.005)RPET(0.995)PK 123.76 0.00046204 22870450000.0 17878100.0 16042790.0 14672280.0 15141900.0 15791850.0 15799860.0 15050360.0 14639460.0 17575890.0 14288210.0 True False 16886366.15389124 15272070.287681257 15618078.645278053 16580981.623421771 17034578.751664504 15701247.213079512 16571797.26615874 14588679.13013566 14384551.428131165 14161627.575459186 1.1924029257169408 1.0784120826723596 1.1028448927962746 1.1708387002179825 1.2028687141288676 1.1087177041915963 1.1701901619610557 1.0301555419672606 1.01574140059002 1.0 23.755483746024176 -7.329872167526284 5.300302640576575 1.0138927950031893 1.143891404843586 0.7101167584527386 0.03847718116061358 0.13065901600725793 7.054637392463185 0.0225424925195277 0.01057269154817365 4.678728371208182e-08 7.329872167526284 0.12999860984039668 QKHEYELNS(ph)TPDKK ddPTM_KYSE-520_SHP099_60min_R1 1 QKHEYELNSTPDKK 14 2 Q9UK61;Q9UK61-2;Q9UK61-3;A0A087X0F1;Q9UK61-4 Q9UK61 FAM208A Protein FAM208A 1 QKHEYELNS(0.5)T(0.5)PDKK 85.36200000000001 0.0019644000000000003 1316900000.0 1206100.0 954970.0 929660.0 921200.0 902230.0 946750.0 871180.0 871120.0 962660.0 729780.0 True False 1139195.228699258 909091.8077608055 989587.3711085917 1008750.5710311207 973230.3680135183 940840.9820709178 959247.3762974564 868098.2880409355 787865.2106837705 723314.7169602491 1.5749648140532226 1.2568412980469827 1.368128351193186 1.394621936175202 1.3455144008455224 1.300735295453173 1.3261825783508472 1.200166770681984 1.089242610733536 1.0 19.464263980266203 -7.571383734338606 0.8088658328723402 0.9908517332711613 1.3839708084574747 0.7584406843668267 0.07552666207210876 0.2809545861471402 0.371780600784838 0.06808408016860486 0.02741773013599053 2.6829727743506015e-08 7.571383734338606 0.3931190751863134 QKIDDRDS(ph)DEEGASDR ddPTM_KYSE-520_SHP099_60min_R1 11 QKIDDRDSDEEGASDR 16 2 Q8TDD1;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(1)DEEGASDR;QKIDDRDS(0.999)DEEGAS(0.001)DR 261.26 1.7475999999999998e-29 18360080000.0 13287500.0 12442470.0 11992845.0 10273450.0 11782690.0 10879290.0 10428400.0 10513079.0 14506360.0 11167050.0 True False 12550415.887025442 11844715.064671764 12765922.977930471 11249835.599174632 12709920.668664543 10811388.315642286 11482604.443376115 10476611.582720097 11872370.699576797 11068118.624833424 1.1339249525990986 1.0701651713504317 1.1533959302972867 1.0164180544590018 1.148336144513976 0.9768045213560402 1.03744862452167 0.9465575801847508 1.0726638466757017 1.0 23.39990667573516 -6.268690559870967 24.905007262330987 1.005276868322546 1.1003722180831348 0.49723089471689563 0.0490521267275501 445.4402044742287 1529912.0398498822 0.015799079547269335 0.014211845089545165 5.38653442983604e-07 6.268690559870967 0.09509534976058887 QKIDDRDSDEEGAS(ph)DR ddPTM_KYSE-520_SHP099_60min_R1 1 QKIDDRDSDEEGASDR 16 2 Q8TDD1;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 QKIDDRDS(0.166)DEEGAS(0.834)DR 95.95700000000001 0.0011461 296340000.0 178300.0 157170.0 161970.0 136450.0 136270.0 149760.0 161480.0 137680.0 184200.0 154270.0 True False 168409.34356776217 149619.31728302035 172410.84536116297 149418.1669748117 146993.67372976083 148825.29228934878 177803.97429292812 137202.4202147536 150753.92330412642 152903.28782024392 1.101410871986922 0.9785225642689629 1.12758102078127 0.9772070248121192 0.9613506408218603 0.9733295759101708 1.162852524806124 0.8973150425388592 0.9859429803848017 1.0 17.222259903182383 -5.2965491787791965 24.925101996665898 0.994535043196434 1.0601066530580905 0.1807702388242084 0.07256178536850653 1103.2137645973617 783189.7709541209 0.02037900222509928 0.030228299273698505 5.0518543534911594e-06 5.2965491787791965 0.06557160986165644 QKIPAR ddPTM_KYSE-520_SHP099_60min_R1 6 QKIPAR 6 1 A0A3B3ISL2;A0A3B3IRU6;Q9GZU2-2;Q9GZU2-4;Q9GZU2 A0A3B3ISL2 PEG3 Paternally-expressed gene 3 protein 0 ;;;;; 97.306 0.014325 11971560000.0 20115100.0 16204650.0 14286610.0 11246790.0 14244670.0 15509300.0 14370010.0 14111440.0 16195500.0 16402200.0 False True 18999275.30454226 15426154.290324451 15207547.739984207 12315681.540129283 15365644.487914525 15412500.705817284 15822670.848582618 14062490.708274847 13254805.455331065 16256889.268718498 1.1686907003236258 0.948899511790823 0.9354525019276945 0.7575669204948768 0.9451774096463272 0.9480596472705276 0.9732901902105341 0.8650173151719676 0.815334670504028 1.0 23.95454789050908 -4.205104802339005 2.2011132142001197 0.900488839445004 1.263954601310614 0.5559958102334546 0.07034955905864236 0.5924524712628808 2.906972221953816 0.018941549128821792 0.4439918437027915 6.235843362572421e-05 4.205104802339005 0.36346576186560997 QKLDPK ddPTM_KYSE-520_SHP099_60min_R1 2 QKLDPK 6 1 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 0 ; 70.91199999999999 0.043775 1561110000.0 2075930.0 1687460.0 959570.0 997020.0 1856950.0 1949920.0 1419690.0 1562080.0 1539280.0 2085070.0 False True 1960774.0246361434 1606391.888670903 1021425.4175662852 1091776.4810350072 2003081.4003997922 1937749.8259938997 1563206.120039182 1556661.509072211 1259785.5540910733 2066597.9019599122 0.9487931942525404 0.7773122614454603 0.4942545507268684 0.5282965205759632 0.9692651862755293 0.9376520822730847 0.7564152264727815 0.7532483738592353 0.6095939383739444 1.0 20.978826280158053 -5.763470799646965 24.99994482211572 0.8262919853831672 0.6798240453371075 0.1706624220479429 0.16107083329355504 111.55692618953647 1372893.517731521 0.05288451731142477 0.06298884766725404 1.7239680003557984e-06 5.763470799646965 -0.14646794004605967 QKLEDSYR ddPTM_KYSE-520_SHP099_60min_R1 2 QKLEDSYR 8 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3;A0A0D9SFF6 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 92.051 0.0044656999999999995 561460000.0 1425040.0 1344620.0 1052810.0 932780.0 1379040.0 1406660.0 1005360.0 1213510.0 1316460.0 1067910.0 False True 1345990.190453187 1280022.436884234 1120675.8171555593 1021431.130749467 1487562.6023357278 1397880.5131659675 1106991.6001680612 1209300.6170453632 1077424.049255974 1058449.1482214069 1.2716625949531515 1.2093376795995856 1.0587904190189172 0.9650261729303253 1.4054171660824641 1.3206874562797213 1.045861865001473 1.1425212246402612 1.0179270785624912 1.0 20.01352052797426 -7.503643961731545 1.4486315729158032 1.0050590646766862 1.1891319049000144 0.23931134400571152 0.12508314904151233 0.7072328304883423 2.6314082122781413 0.12149780996820615 0.04059840130658456 3.1358554715079355e-08 7.503643961731545 0.18407284022332826 QKLEEDAEMK ddPTM_KYSE-520_SHP099_60min_R1 1 QKLEEDAEMK 10 1 P05455 P05455 SSB Lupus La protein 0 106.49 0.0048419 0.0 636020.0 599210.0 413540.0 420220.0 604070.0 573790.0 451240.0 519430.0 529920.0 500290.0 False True 600738.7027255631 570423.0521674531 440197.4500873949 460157.5824562502 651606.8723118568 570208.7637734062 496855.74287800957 517628.2185658738 433699.88619610533 495857.8198197305 1.2115140242095248 1.1503762356209908 0.8877493355805683 0.9280030768165376 1.31410022443278 1.1499440786891413 1.0020125185454207 1.0439045183437017 0.8746456521625036 1.0 18.919566982052636 -7.256389939638755 1.9649845770506207 0.9511692214112236 1.0967638643160753 0.1932606649563029 0.12455684460166588 0.6803783460409569 4.89986896534703 0.09754118127560109 0.03974694095543177 5.541279551072316e-08 7.256389939638755 0.1455946429048517 QKNEGRPET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 QKNEGRPETPK 11 2 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 QKNEGRPET(1)PK;QKNEGRPET(1)PK;QKNEGRPET(1)PK;QKNEGRPET(1)PK;QKNEGRPET(1)PK;QKNEGRPET(1)PK 118.13 0.00056374 3359730000.0 2690570.0 2470340.0 2257378.0 2154503.0 2391620.0 2118900.0 2069569.0 2090905.0 2637310.0 2054372.0 True False 2541318.718581681 2351661.1583440644 2402892.1978125023 2359266.3173450516 2579826.8875436317 2105675.159133954 2278781.2315670107 2083652.1385758964 2158440.9851748417 2036171.8623572309 1.248086551809852 1.1549423709360165 1.18010284015551 1.1586773989764212 1.2669985943902708 1.0341342978270316 1.1191497504188652 1.0233184030761031 1.060048527866436 1.0 20.957427906035594 -6.274889941453511 24.897285839205438 1.0532763096538187 1.1955636604802922 0.7514503642943939 0.04427049125901806 393.8805727988953 729079.3962381863 0.015081051870531242 0.013370365236421407 5.310189975738945e-07 6.274889941453511 0.14228735082647348 QKPES(ph)DDDS(ph)DRENK ddPTM_KYSE-520_SHP099_60min_R1 2 QKPESDDDSDRENK 14 2 Q96ST2;Q96ST2-3 Q96ST2 IWS1 Protein IWS1 homolog 2 QKPES(1)DDDS(1)DRENK;QKPES(1)DDDS(1)DRENK 106.86 0.00039251 440740000.0 1848530.0 1531840.0 1395560.0 1644870.0 1702790.0 1486310.0 1636460.0 1833660.0 1793790.0 1490910.0 True False 1745988.3559468049 1458248.107061283 1485520.0305749478 1801197.9502518035 1836789.8854502065 1477033.3879712978 1801889.3471105122 1827299.4614394603 1468082.9537660652 1477701.6973104265 1.181556710075307 0.9868352386110464 1.005290873847375 1.2189185094191706 1.2430045176190556 0.9995477373137318 1.2193863960433566 1.2365820955375084 0.9934907406807013 1.0 20.49492363228169 -5.249477397379356 24.91941584166847 1.1429712826001721 1.050788372376719 0.0762233774905674 0.1081632135779184 1522.4347641415977 3171559.1819572635 0.028796331490328106 0.04937951516130011 5.630184186198331e-06 5.249477397379356 -0.09218291022345304 QKPQAER ddPTM_KYSE-520_SHP099_60min_R1 4 QKPQAER 7 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ;;; 82.241 0.013394999999999999 938090000.0 512206.0 1371870.0 418882.0 354264.0 760730.0 596510.0 1024800.0 607248.0 455646.0 2701210.0 False True 483792.9121226536 1305963.30598115 445883.8039548969 387933.1440466442 820595.1230383872 592786.9598258502 1128396.7850841773 605141.5984207483 372912.1723009337 2677279.380909582 0.18070318532027435 0.487794929170769 0.16654362153396626 0.14489826755205776 0.30650335892834507 0.221413933881064 0.4214714359398736 0.22602855822060555 0.13928773177726414 1.0 21.35233626505363 -10.863778711677897 3.00000357218101 1.288556311471374 0.26054674024443336 0.798925175260174 0.11209963690504147 19463981.496020894 15528982.244516566 40089146.61205588 0.02820578961969088 1.3684259091444492e-11 10.863778711677897 -1.0280095712269408 QKRPSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 QKRPSPSR 8 2 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59;E9PJG2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 QKRPS(0.005)PS(0.995)R;QKRPS(0.091)PS(0.909)R 76.416 0.011647 2535200000.0 1887390.0 1635740.0 1547260.0 1670120.0 1592750.0 1554150.0 1546160.0 1732040.0 1854650.0 1397610.0 True False 1782692.7142813145 1557156.5951042045 1646998.8553035306 1828847.7026601105 1718090.3634921613 1544449.9733673304 1702460.9418674405 1726031.9575011735 1517892.3119218147 1385228.2627241276 1.2869306541403878 1.1241155244998902 1.1889728932216679 1.3202500641039339 1.2402940437509136 1.1149425801709276 1.2290111223398354 1.2460271017765958 1.0957705331082372 1.0 20.401692297487386 -7.9657564233036755 3.7543218356047428 1.0008717402347758 1.215280915074442 0.57720405340303 0.061072068967052924 0.1404378256640911 4.505272421688042 0.06010347894805199 0.015871396548016725 1.0820406502132626e-08 7.9657564233036755 0.21440917483966615 QKS(ph)AEPS(ph)PTVMSTS(ph)LGSNLSELDR ddPTM_KYSE-520_SHP099_60min_R1 1 QKSAEPSPTVMSTSLGSNLSELDR 24 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 3 QKS(1)AEPS(0.996)PT(0.004)VMS(0.008)T(0.142)S(0.807)LGS(0.043)NLS(0.001)ELDR 86.727 1.4591e-05 0.0 150300.0 194520.0 176590.0 185080.0 187540.0 196590.0 242430.0 225110.0 243950.0 250970.0 True False 141962.55938437817 185174.9672195274 187973.2739539899 202669.94755366916 202298.33104336503 195363.00888864216 266937.1902887951 224329.14595106916 199654.8294790537 248746.60105170522 0.5707115545867073 0.7444321507775552 0.7556817788031492 0.8147646910421162 0.8132707349087142 0.7853896618592726 1.0731289961759467 0.9018380351836021 0.8026434477291726 1.0 17.924317286809273 -3.158112891954716 0.312841581780427 0.9531435105497142 3.429010487999537e-12 0.6452379958066063 0.07909698287990032 9.929547038370993 0.459443573529346 0.08355739381272649 4.100459479972933 0.0006948436741313768 3.158112891954716 -0.9531435105462852 QKS(ph)AEPS(ph)PTVMSTSLGSNLSELDR ddPTM_KYSE-520_SHP099_60min_R1 5 QKSAEPSPTVMSTSLGSNLSELDR 24 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 2 QKS(1)AEPS(0.959)PT(0.041)VMSTSLGSNLSELDR;QKS(0.988)AEPS(0.747)PT(0.264)VMSTSLGSNLSELDR;QKS(0.999)AEPS(0.5)PT(0.5)VMS(0.001)TSLGSNLSELDR;QKS(0.991)AEPS(0.898)PT(0.104)VMS(0.003)T(0.002)S(0.001)LGS(0.001)NLSELDR;QKS(1)AEPS(0.499)PT(0.499)VMS(0.002)TSLGSNLSELDR 121.45 0.00011481 8155940000.0 3177920.0 2981950.0 2928730.0 2929020.0 3138070.0 3337500.0 3506650.0 3561970.0 4619040.0 3516970.0 True False 3001634.4425735376 2838692.646001799 3117520.6219336865 3207393.180158023 3385018.2558241077 3316669.4245172376 3861136.4036060036 3549614.3574400516 3780338.7725227587 3485812.3819612525 0.8611004017619279 0.8143561198794759 0.8943455012285111 0.9201278866171849 0.9710844660892408 0.9514767466202961 1.1076718941005022 1.0183033303252258 1.0844928981507014 1.0 21.733063490222573 -5.793149229216317 0.8198450921325697 1.053358667225687 0.8330458781841953 0.798645130801269 0.03996963838278906 0.26654986014630067 0.3901598532183167 0.021092296581683923 0.03421467895800124 1.6100922915231453e-06 5.793149229216317 -0.22031278904149165 QKS(ph)AEPSPT(ph)VMSTSLGSNLSELDR ddPTM_KYSE-520_SHP099_60min_R1 1 QKSAEPSPTVMSTSLGSNLSELDR 24 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 2 QKS(1)AEPS(0.16)PT(0.84)VMSTSLGSNLSELDR 162.38 2.7474e-10 1077100000.0 1099300.0 930720.0 940740.0 905260.0 966370.0 1069900.0 1238500.0 1074500.0 1453700.0 1066000.0 True False 1038319.6375997801 886006.8141607982 1001381.6056372187 991295.6382236563 1042417.821106839 1063222.357240747 1363699.666595191 1070772.8102901843 1189744.7247948365 1056556.0693354495 0.982739740686796 0.8385800241704892 0.947778953432226 0.9382328747088259 0.9866185537720652 1.0063094502021936 1.2907026008122107 1.0134557373407327 1.126059240323289 1.0 20.010937899593525 -6.332779833029312 2.5604106249152987 1.1100243369661087 0.9286599931860945 0.4560141474007736 0.08473624418458374 0.2441636352487511 3.142153299921016 0.03184661617502013 0.028129061836436764 4.647508224215111e-07 6.332779833029312 -0.1813643437800142 QKS(ph)AEPSPTVMSTSLGSNLSELDR ddPTM_KYSE-520_SHP099_60min_R1 1 QKSAEPSPTVMSTSLGSNLSELDR 24 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 QKS(0.799)AEPS(0.08)PT(0.121)VMSTSLGSNLSELDR 69.20100000000001 0.013822 509150000.0 81205.0 101460.0 94168.0 68989.0 60318.0 66989.0 68081.0 81373.0 114200.0 113580.0 True False 76700.39677184576 96585.70930543516 100238.21995412736 75545.6938177009 65064.68343752631 66570.89680269212 74963.29188652984 81090.73605560101 93464.1587477267 112573.76956390297 0.6813345335149895 0.8579770374537194 0.8904225233146049 0.6710772332698433 0.5779737472555014 0.5913535369791706 0.6659037196402721 0.7203341983637629 0.8302481040636326 1.0 16.78051118348449 -8.040000973815221 2.360373375961948 0.9991486955454176 0.7066436892122235 0.48120343046430725 0.09499913508309564 0.3290575261712609 4.25707502718415 0.10557412771661936 0.028896385762039786 9.120087943632176e-09 8.040000973815221 -0.2925050063331941 QKS(ph)DAEEDGGT(ph)VSQEEEDRKPK ddPTM_KYSE-520_SHP099_60min_R1 1 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 2 QKS(1)DAEEDGGT(0.574)VS(0.426)QEEEDRKPK 116.57 0.00042407 14778000000.0 459940.0 465030.0 388130.0 506630.0 457540.0 406640.0 480470.0 530930.0 707820.0 417470.0 True False 434426.2113323415 442689.2607757399 413149.48082995747 554779.9628761357 493545.79495351017 404102.008924551 529040.596535318 529088.3277499938 579297.7306901568 413771.5405867458 1.0499180555441452 1.0698881323446934 0.9984966105790983 1.340788112419317 1.1927978281291194 0.9766307473721297 1.2785814021551982 1.278696758601918 1.4000424723959695 1.0 18.65847489376151 -5.243009862003944 24.96668591447747 1.21372161776527 1.04247964067525 0.26970473720276533 0.12820211033434303 1143.6429473199194 1549304.5421030354 0.03551671154626076 0.06137062059793488 5.714656596233129e-06 5.243009862003944 -0.1712419770900202 QKS(ph)DAEEDGGTVS(ph)QEEEDR ddPTM_KYSE-520_SHP099_60min_R1 6 QKSDAEEDGGTVSQEEEDR 19 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 2 QKS(1)DAEEDGGT(0.03)VS(0.97)QEEEDR;QKS(1)DAEEDGGT(0.037)VS(0.963)QEEEDR;QKS(1)DAEEDGGT(0.024)VS(0.976)QEEEDR;QKS(1)DAEEDGGT(0.002)VS(0.998)QEEEDR;QKS(1)DAEEDGGT(0.004)VS(0.996)QEEEDR;QKS(1)DAEEDGGT(0.063)VS(0.937)QEEEDR 193.18 4.5697e-13 4774840000.0 2787800.0 2958090.0 2296480.0 3857900.0 3024510.0 3005630.0 3731530.0 4188350.0 4266060.0 2647910.0 True False 2633155.176658479 2815978.9162163907 2444514.775297916 4224553.656080075 3262521.729892121 2986870.7482881644 4108749.4686232996 4173821.591418235 3491451.042621072 2624451.5774428057 1.003316349705394 1.0729780425060096 0.9314383226989407 1.6096900748294105 1.2431251381940274 1.1380932968854736 1.5655649751506382 1.5903595354139066 1.3303545291634022 1.0 21.323584548611255 -5.245248048467214 24.899609257204776 1.3736960722539069 1.0096175886840484 0.41336524935669716 0.19070943806408797 752.0021708213736 1156454.1812537154 0.05185402653457881 0.08944943161386558 5.685281217214441e-06 5.245248048467214 -0.3640784835698585 QKS(ph)DAEEDGGTVS(ph)QEEEDRKPK ddPTM_KYSE-520_SHP099_60min_R1 9 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 2 QKS(1)DAEEDGGT(0.116)VS(0.884)QEEEDRKPK;QKS(1)DAEEDGGT(0.165)VS(0.835)QEEEDRKPK;QKS(1)DAEEDGGT(0.195)VS(0.805)QEEEDRKPK;QKS(1)DAEEDGGT(0.182)VS(0.818)QEEEDRKPK;QKS(1)DAEEDGGT(0.051)VS(0.949)QEEEDRKPK;QKS(1)DAEEDGGT(0.056)VS(0.944)QEEEDRKPK;QKS(1)DAEEDGGT(0.1)VS(0.9)QEEEDRKPK;QKS(1)DAEEDGGT(0.057)VS(0.943)QEEEDRKPK;QKS(1)DAEEDGGT(0.038)VS(0.962)QEEEDRKPK 160.43 2.3209e-09 47040000000.0 13309980.0 15148680.0 13716080.0 17541040.0 14200040.0 14668720.0 15281900.0 17931440.0 24269540.0 11243350.0 True False 12571648.876612678 14420914.674167743 14600240.463303933 19208135.167694043 15317502.360824507 14577167.077394594 16826743.588971388 17869240.01986955 19862803.3213161 11143742.666193929 1.128135246226611 1.2940818095087179 1.3101738707226043 1.7236700220981014 1.374538413139443 1.308103346788187 1.5099723757995258 1.6035223133856402 1.782417623620531 1.0 23.4097305126104 -4.854972669081073 2.4963177109719092 1.4879512178732952 1.1867932088743123 0.19140643957079684 0.21406157321771963 0.43550644877669853 5.382994650686626 0.057976085656170497 0.16553918525871464 1.3964562397487332e-05 4.854972669081073 -0.30115800899898293 QKS(ph)DAEEDGGTVSQEEEDR ddPTM_KYSE-520_SHP099_60min_R1 3 QKSDAEEDGGTVSQEEEDR 19 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKS(1)DAEEDGGTVSQEEEDR;QKS(1)DAEEDGGTVSQEEEDR;QKS(1)DAEEDGGTVSQEEEDR 173.34 7.1692e-09 1909760000.0 1618610.0 1759930.0 1620660.0 2232730.0 1972390.0 1982850.0 2225920.0 2500120.0 2740100.0 1553780.0 True False 1528822.4766809614 1675380.3210912114 1725130.3367476834 2444927.9879052485 2127605.871636037 1970474.2976491405 2450937.716485726 2491447.6672523962 2242566.9122998766 1540014.7180225486 0.9927323802749376 1.0878989021887262 1.12020379841748 1.5876004036147466 1.3815490506272452 1.2795165361661753 1.591502787475204 1.6178076989105223 1.4561983635970948 1.0 20.554512708242193 -5.138787141770239 5.254534432878054 1.4414005366613523 1.0555366694883193 0.45421933669311754 0.17491245257599755 0.18774656421422437 7.257320386703237 0.04663159885934338 0.08286155906526434 7.264619267545114e-06 5.138787141770239 -0.385863867173033 QKS(ph)DAEEDGGTVSQEEEDRKPK ddPTM_KYSE-520_SHP099_60min_R1 5 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(0.999)DAEEDGGT(0.001)VSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK;QKS(1)DAEEDGGTVSQEEEDRKPK 255.63 2.8542999999999997e-28 38350100000.0 9645340.0 11362290.0 10004450.0 13009500.0 11068670.0 10820090.0 11305290.0 12987310.0 17794500.0 8067030.0 True False 9110293.762691397 10816428.533255018 10649352.854685968 14245918.968551185 11939711.356882598 10752557.804801408 12448139.042197773 12942260.052870937 14563467.362840805 7995562.390254361 1.1394187573091497 1.352803968666289 1.3319079177802755 1.781728197870767 1.4932922506408912 1.3448156965052886 1.556880984053176 1.6186803905934137 1.8214437774373369 1.0 22.93076808259148 -4.696141918980969 1.8224597003942171 1.533453251248651 1.1660138582465718 0.19580419058041487 0.2238035482706724 0.6269674116897591 3.6621659074971964 0.06141095948371145 0.297376842594224 2.0130663114913378e-05 4.696141918980969 -0.3674393930020792 QKS(ph)EEELKDK ddPTM_KYSE-520_SHP099_60min_R1 6 QKSEEELKDK 10 2 H0YM11;V9GY01;Q9Y448-3;Q9Y448-2;Q9Y448 H0YM11 KNSTRN Small kinetochore-associated protein 1 QKS(1)EEELKDK;QKS(1)EEELKDK;QKS(1)EEELKDK;QKS(1)EEELKDK;QKS(1)EEELKDK;QKS(1)EEELKDK 113.4 0.00047593 7738600000.0 5397360.0 4607160.0 4484310.0 5024310.0 4763620.0 5021860.0 5329130.0 5407580.0 5106420.0 4285290.0 True False 5097957.681429595 4385825.118111856 4773375.797749689 5501818.911786122 5138489.792709791 4990516.708975614 5867850.467696761 5388822.367118666 4179222.850372728 4247325.664505173 1.2002747338244246 1.032608625885253 1.1238544380151274 1.295360739056279 1.2098177061514404 1.174978587274641 1.3815400398265396 1.2687565759680168 0.9839657187812134 1.0 22.01812330116791 -3.8342490540229446 19.8888796766196 1.1794070409332071 42.534124943045065 0.0 0.1257977868396169 15025.902002590301 1808152.3163426048 0.030815882631205868 81324.70249257158 0.00014647076369866618 3.8342490540229446 41.35471790211186 QKS(ph)FSEDVISHK ddPTM_KYSE-520_SHP099_60min_R1 1 QKSFSEDVISHK 12 1 Q03001;F8W9J4;Q03001-14;F6QMI7;E9PHM6;Q03001-8;A0A494C1D7;H0YC82;Q03001-10 Q03001 DST Dystonin 1 QKS(0.971)FS(0.029)EDVISHK 199.08 2.7286999999999998e-08 1568600000.0 1355800.0 1360300.0 1351500.0 1402500.0 1516200.0 1229300.0 1415700.0 1404800.0 1591900.0 1120300.0 True False 1280591.0712797064 1294949.146148072 1438619.8524764576 1535793.178323001 1635516.314002081 1221627.4827143187 1558812.7719005349 1399927.0766827837 1302851.0885333286 1110375.0135802124 1.15329600866167 1.1662268425626152 1.2956161971241378 1.38313016732167 1.4729404876723957 1.100193599255617 1.403861535819698 1.2607696134740647 1.1733433052789168 1.0 20.08261557820538 -8.058382121087956 2.3029696103749493 1.000956327277047 1.2849774937547385 0.37312947498024696 0.11187616674986216 0.3896225266588727 4.714613648601212 0.11058781452328913 0.03032891483821072 8.742142450638097e-09 8.058382121087956 0.2840211664776915 QKS(ph)PAQSDSTTQR ddPTM_KYSE-520_SHP099_60min_R1 7 QKSPAQSDSTTQR 13 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 QKS(0.999)PAQS(0.001)DSTTQR;QKS(1)PAQSDSTTQR;QKS(1)PAQSDSTTQR;QKS(1)PAQSDSTTQR;QKS(1)PAQSDSTTQR;QKS(0.998)PAQS(0.002)DSTTQR;QKS(1)PAQSDSTTQR 215.51 1.9117e-11 10666600000.0 1735551.0 1588336.0 1523876.0 1422185.0 1321355.0 1348916.0 1424067.0 1398448.0 1688325.0 1352190.0 True False 1639276.5262948545 1512029.9544190583 1622107.4852478076 1557349.0348044878 1425338.1210184775 1340496.9148890171 1568025.5899145878 1393597.1102882163 1381767.739209767 1340210.648587901 1.2231484117978477 1.12820320895987 1.2103377084467464 1.1620181024866296 1.063517979446194 1.0002135979902993 1.16998442861704 1.0398343810777548 1.0310078797431226 1.0 20.35402834447655 -4.47387281292565 0.24213417867834425 0.9946252425472003 1.3702583001013426 0.5964559006743233 0.05179055131475291 7.2629443028153124 0.40251854365094875 0.08605841301906425 0.8186101364253464 3.358359524444587e-05 4.47387281292565 0.37563305755414234 QKS(ph)PEIHR ddPTM_KYSE-520_SHP099_60min_R1 14 QKSPEIHR 8 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR;QKS(1)PEIHR 158.05 0.00016039 320864964400.0 70358452.0 60254121.0 62050134.0 61825854.0 61371554.0 59818889.7 63203533.3 63071487.0 71477693.0 57304209.1 True False 66455528.41146327 57359422.583880514 66049984.92136474 67701764.5755392 66201146.143424034 59445537.82069182 69592763.25300609 62852706.73259278 58499145.75720892 56796538.389374085 1.170063005528102 1.009910536988144 1.1629227201938395 1.1920051203015807 1.1655841715136892 1.0466401563622991 1.2252993796189877 1.1066291804916006 1.029977308760658 1.0 25.759299667873396 -7.759820153511656 3.34126934322113 1.0048006320239313 1.136133422144706 0.387354969289737 0.061658967955090585 0.2464549858772746 5.315195165462974 0.05578958422650379 0.01594434815996166 1.7385206216805907e-08 7.759820153511656 0.1313327901207746 QKS(ph)PEIHRR ddPTM_KYSE-520_SHP099_60min_R1 8 QKSPEIHRR 9 2 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 QKS(1)PEIHRR;QKS(1)PEIHRR;QKS(1)PEIHRR;QKS(1)PEIHRR;QKS(1)PEIHRR;QKS(1)PEIHRR;QKS(1)PEIHRR;QKS(1)PEIHRR 156.36 0.00011597 145532400000.0 18993880.0 17487380.0 18429190.0 15456990.0 14763230.0 13837940.0 13823100.0 11881350.0 20106770.0 9520250.0 True False 17940251.613038927 16647260.015707482 19617165.07514655 16926017.682286505 15925012.209711716 13751572.283536801 15220473.848455375 11840136.369977942 16455887.418424034 9435907.991642423 1.9012745385954353 1.7642456910826494 2.078990712130923 1.793787910742477 1.6877032103128629 1.457366084505789 1.613037543597973 1.254795657234576 1.7439643787327463 1.0 23.169729920431397 -7.885235164820197 0.09875346189055624 0.2112061324246894 2.6649617037624855 0.6994162597975114 0.16485210120252677 7.253214599615132 0.5548765414989796 7.054117715440761 5.797279114622888 1.3024613215858098e-08 7.885235164820197 2.4537555713377963 QKS(ph)VSDPVEDKK ddPTM_KYSE-520_SHP099_60min_R1 2 QKSVSDPVEDKK 12 2 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 QKS(0.959)VS(0.041)DPVEDKK;QKS(0.823)VS(0.177)DPVEDKK 132.64 3.4037e-05 1754210000.0 1612880.0 1481810.0 1478330.0 1535230.0 1637980.0 1546910.0 1928020.0 2015980.0 1965380.0 1930480.0 True False 1523410.3312034318 1410621.6233578427 1573625.5172116326 1681137.7976162683 1766879.7071686618 1537255.1608928696 2122923.0772618996 2008987.0359132711 1608516.5351979593 1913377.4490907146 0.796189132430402 0.7372416895726485 0.8224333980519417 0.8786231898025073 0.9234350012896451 0.8034249392995679 1.1095160958810122 1.049969015192477 0.8406687012864958 1.0 20.867690069363217 -5.695785914292247 0.7467940449390709 0.9902744267858566 0.7547399994753425 0.4745312631257973 0.08371677895651641 0.6704378259634799 0.7942934059649222 0.049181185813031686 0.0943615847778452 2.0147171610655835e-06 5.695785914292247 -0.2355344273105141 QKS(ph)YTLVVAK ddPTM_KYSE-520_SHP099_60min_R1 2 QKSYTLVVAK 10 1 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3;E9PQN0;E9PRG1;E9PIG0;E9PQD2;E9PJP4 O43491 EPB41L2 Band 4.1-like protein 2 1 QKS(0.996)YT(0.004)LVVAK;QKS(0.999)YT(0.001)LVVAK 154.1 7.9832e-05 1018700000.0 2057800.0 1789390.0 1836160.0 1613360.0 1811880.0 1713580.0 1818710.0 1692900.0 2180500.0 2227700.0 True False 1943649.731877403 1703425.0184708522 1954521.8115598755 1766693.2493256289 1954464.6478130138 1702884.9115997734 2002562.9556991044 1687027.7250258313 1784576.1659318553 2207964.3111243728 0.8802903752043114 0.7714911920851694 0.885214403925109 0.8001457453023626 0.8851885141285332 0.7712465745121599 0.9069725201669266 0.7640647616114491 0.8082450232282453 1.0 21.074285422336995 -11.043718745937976 2.5179484247390818 1.2196937717640357 0.8294970890317316 0.48837002988822065 0.052096739301062824 17879473.632482495 7779626.340387511 22602527.22942195 0.011710216650164508 9.042348769690814e-12 11.043718745937976 -0.3901966827323041 QKSDAEEDGGT(ph)VSQEEEDRKPK ddPTM_KYSE-520_SHP099_60min_R1 1 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKSDAEEDGGT(0.5)VS(0.5)QEEEDRKPK 74.206 0.008389200000000001 2269700000.0 40235.0 49547.0 52001.0 64670.0 50778.0 51475.0 42079.0 81962.0 108650.0 45609.0 True False 38003.08434351602 47166.687748436765 55353.06766454176 70816.21735625542 54773.93971270121 51153.72543131827 46332.755971464765 81677.69295207458 88921.89884361195 45204.939743265066 0.8406843269640233 1.0433967618652555 1.224491570587452 1.5665592689304735 1.2116804053668007 1.1315959211944198 1.0249489598836978 1.8068311431438964 1.967083671577289 1.0 15.464192810458124 -7.261378334380199 24.999999898135293 1.6652180715499802 1.165684440256216 0.31294525193399814 0.29351569898303026 5.977273604650226 2449162.943076539 0.14826673717267577 0.07850769057149208 5.47799543013215e-08 7.261378334380199 -0.49953363129376416 QKSDAEEDGGTVS(ph)QEEEDR ddPTM_KYSE-520_SHP099_60min_R1 4 QKSDAEEDGGTVSQEEEDR 19 1 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKSDAEEDGGT(0.006)VS(0.994)QEEEDR;QKSDAEEDGGT(0.006)VS(0.994)QEEEDR;QKSDAEEDGGT(0.005)VS(0.995)QEEEDR;QKSDAEEDGGT(0.019)VS(0.981)QEEEDR 159.7 9.0879e-09 1099910000.0 1513285.0 1750630.0 1408635.0 2007478.0 1817072.0 1740571.0 1972425.0 2288531.0 2478203.0 1520996.0 True False 1429340.0643911415 1666527.1070507963 1499437.8659956902 2198268.1055497304 1960065.2286745727 1729707.4507569703 2171816.9680129364 2280592.6201081504 2028223.8056137701 1507521.1587569823 0.9481393054341575 1.1054751022034883 0.9946380236759284 1.4582004987328332 1.3001908578787265 1.1473851897264185 1.4406543851123756 1.5128096921628613 1.3454032096545365 1.0 20.52374682048406 -5.25047340430747 24.84850549541662 1.3339571513379913 1.025023210279894 0.4568387196365743 0.14823073791446414 583.6090765228217 1322434.303145346 0.03991169538813736 0.06827894243452957 5.617286769178313e-06 5.25047340430747 -0.30893394105809735 QKSDAEEDGGTVS(ph)QEEEDRKPK ddPTM_KYSE-520_SHP099_60min_R1 10 QKSDAEEDGGTVSQEEEDRKPK 22 3 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 QKSDAEEDGGT(0.029)VS(0.971)QEEEDRKPK;QKSDAEEDGGT(0.002)VS(0.998)QEEEDRKPK;QKSDAEEDGGT(0.221)VS(0.779)QEEEDRKPK;QKSDAEEDGGTVS(1)QEEEDRKPK;QKSDAEEDGGTVS(1)QEEEDRKPK;QKSDAEEDGGT(0.007)VS(0.993)QEEEDRKPK;QKSDAEEDGGTVS(1)QEEEDRKPK;QKSDAEEDGGT(0.003)VS(0.997)QEEEDRKPK;QKSDAEEDGGT(0.001)VS(0.999)QEEEDRKPK;QKSDAEEDGGT(0.005)VS(0.995)QEEEDRKPK 291.65 8.3716e-45 34731200000.0 10169520.0 12122200.0 10457990.0 14403940.0 12092350.0 11103320.0 11746110.0 13191060.0 19526570.0 8271230.0 True False 9605396.453164482 11539831.316206833 11132128.768775618 15772886.126897508 13043949.148940152 11034020.061312582 12933521.429786384 13145303.291676555 15981037.112772284 8197953.337119568 1.1716822550906876 1.40764784107218 1.3579156053951145 1.9240029161277792 1.5911226390955857 1.3459481418797017 1.577652482019458 1.6034859862102224 1.9493935200157384 1.0 22.96683234747718 -5.029559389130774 24.195002380418096 1.591344061727104 1.3129439827217015 0.16960447501039344 0.26038949978975584 725.6593301172445 593968.279314044 0.06809273766540248 0.11822602203319298 9.342016088279361e-06 5.029559389130774 -0.2784000790054024 QKSLDS(ph)DLSDGPVTVQEFMEVK ddPTM_KYSE-520_SHP099_60min_R1 1 QKSLDSDLSDGPVTVQEFMEVK 22 1 Q14161-6;Q14161-3;Q14161;R4GNG3;Q14161-11;Q14161-7;Q14161-5;Q14161-2;Q14161-9 Q14161-6 GIT2 ARF GTPase-activating protein GIT2 1 QKS(0.402)LDS(0.474)DLS(0.122)DGPVT(0.002)VQEFMEVK 51.22 0.048304 70028000.0 28871.0 48059.0 32565.0 29816.0 32516.0 33599.0 29800.0 31184.0 55378.0 34241.0 True False 27269.468077088364 45750.17350197031 34664.19200584225 32649.70367549272 35074.824209267674 33389.29617808377 32812.47481997312 31075.829982400297 45322.75116577587 33937.65137909489 0.803516653892142 1.3480653976589485 1.0214080997718922 0.9620495923770517 1.0335077055707298 0.9838422760937166 0.966845774135836 0.9156741471374347 1.335471057189716 1.0 15.050599107630571 -11.520254012189087 2.241298236367486 0.4210846158760661 1.039486322277886 0.005551242089446351 0.1638813824271405 12048702.506214969 2980746.4693197752 36118540.847490065 0.03973373458743016 3.018185913353408e-12 11.520254012189087 0.6184017064018199 QKSPAQSDS(ph)TTQR ddPTM_KYSE-520_SHP099_60min_R1 1 QKSPAQSDSTTQR 13 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 QKS(0.049)PAQS(0.119)DS(0.513)T(0.159)T(0.159)QR 109.99 0.020447 0.0 225130.0 195910.0 199750.0 174990.0 177280.0 181980.0 186350.0 180390.0 232900.0 190930.0 True False 212641.59011447156 186498.1895330948 212626.20461130017 191620.99698733806 191230.9274147795 180844.1953179464 205188.0766007381 179764.26919334228 190611.2309312219 189238.50874129243 1.123669762189753 0.9855192305919936 1.1235884600104358 1.0125898701162495 1.0105286111518184 0.9556416213635361 1.0842828870589458 0.9499349280917111 1.0072539262703983 1.0 17.529846171555132 -5.453747921441595 10.161406804255645 1.0016200684091217 1.0684562301649991 0.3191421829140939 0.049698157996372956 0.7604088636910612 108.99117283212533 0.013163841355137857 0.01951634792477262 3.5176455680634048e-06 5.453747921441595 0.06683616175587748 QKSPEIHR ddPTM_KYSE-520_SHP099_60min_R1 4 QKSPEIHR 8 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 0 ;;; 111.61 0.0011729000000000002 3138560000.0 2221190.0 1898800.0 1920900.0 1802050.0 1959710.0 1917590.0 1966380.0 1967030.0 2311170.0 1815460.0 False True 2097976.1628675098 1807578.7978430958 2044724.2875486666 1973316.290193911 2113928.02777537 1905621.6095161051 2165160.880419424 1960206.8320382552 1891519.787854493 1799376.436806507 1.1659462244548178 1.004558446397768 1.1363515969885642 1.096666739560127 1.1748114427502019 1.0590455507454348 1.2032840022414115 1.0893811833599347 1.0512084904321188 1.0 20.77906560510888 -7.889391528531182 2.487944375428118 1.0027489071240736 1.1163922068260783 0.3268391547371089 0.055154684069778165 0.30102185678564525 3.8444564479808876 0.05002350729744128 0.013792660671059618 1.2900557281579924e-08 7.889391528531182 0.11364329970200471 QKSQT(ph)PPRR ddPTM_KYSE-520_SHP099_60min_R1 1 QKSQTPPRR 9 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QKS(0.002)QT(0.998)PPRR 94.616 0.0026759 253880000.0 215150.0 224960.0 218780.0 159590.0 165590.0 174680.0 128430.0 138740.0 238260.0 154130.0 True False 203215.2006091083 214152.58392815565 232882.90886037657 174757.38561751708 178620.9909217809 173589.7573257442 141412.9577560116 138258.74332215945 194997.99004582607 152764.52811132558 1.330251224688871 1.4018475792501657 1.5244567030028433 1.1439657345726517 1.1692569808588855 1.136322413795187 0.9256923678837169 0.9050448100190172 1.276461181510169 1.0 17.220950063236867 -5.602607731904695 1.5595032390918675 1.0412172670403013 1.4172246770432493 0.6258206967911462 0.11856981050033867 0.249301632435976 1.2423284410359017 0.042234827377950715 0.06639856641018281 2.4968489392899323e-06 5.602607731904695 0.376007410002948 QKVDSLLENLEK ddPTM_KYSE-520_SHP099_60min_R1 4 QKVDSLLENLEK 12 1 P07910;G3V2Q1;P07910-3;G3V5V7;G3V576;A0A0G2JPF8;A0A0G2JNQ3;P0DMR1;O60812;B7ZW38;B2RXH8;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC;HNRNPCL4;HNRNPCL1;HNRNPCL3;HNRNPCL2 Heterogeneous nuclear ribonucleoproteins C1/C2;Heterogeneous nuclear ribonucleoprotein C-like 4;Heterogeneous nuclear ribonucleoprotein C-like 1;Heterogeneous nuclear ribonucleoprotein C-like 3;Heterogeneous nuclear ribonucleoprotein C-like 2 0 ;;; 234.82 3.719e-15 5786842000.0 10486440.0 9601910.0 6775821.0 6416557.0 10461370.0 9840690.0 7252239.0 8191781.0 8196910.0 8203998.0 False True 9904736.269000126 9140619.830839258 7212601.26335692 7026384.64807179 11284620.301946921 9779270.6034914 7985366.093151926 8163365.623687065 6708557.771285707 8131316.960333869 1.2180974271839775 1.124125387735955 0.8870151414022328 0.8641139783810973 1.3877973712001972 1.2026674954618748 0.9820507713702566 1.0039413865563889 0.8250272131822366 1.0 22.955057601608885 -6.924731345456687 6.883771972848389 0.9468544116493854 1.1050608324379265 0.21546950783038343 0.151389057026773 0.4048804336148784 30.18701383243452 0.0699250451126986 0.04690222142283938 1.1892376622979735e-07 6.924731345456687 0.15820642078854108 QKVLS(ph)PPHIK ddPTM_KYSE-520_SHP099_60min_R1 2 QKVLSPPHIK 10 1 A0A0D9SG79;Q9NZ09-2;Q9NZ09;Q9NZ09-3;Q9NZ09-4 A0A0D9SG79 UBAP1 Ubiquitin-associated protein 1 1 QKVLS(1)PPHIK;QKVLS(1)PPHIK 96.59100000000001 0.0017471 2877300000.0 1479110.0 1544650.0 1404680.0 1163090.0 1271340.0 1695330.0 1398590.0 1625940.0 2455870.0 1622570.0 True False 1397060.8197673142 1470442.6954330816 1495227.9203674656 1273629.7239042404 1371387.225064901 1684748.8166192651 1539973.1261230279 1620299.993637247 2009945.9154446525 1608195.2921403565 0.8687134122299026 0.9143433652737913 0.9297551906009238 0.7919621019466854 0.8527491852309266 1.0476021319382318 0.9575784319536644 1.0075268852956163 1.2498145749261607 1.0 20.61701118099939 -6.822361159795379 1.1220025160274518 1.0996276768833724 0.8762372474426581 0.5403704245079841 0.0820760226955423 0.3995138143446963 0.987211202923237 0.059084191066101285 0.031787120312410794 1.505354690811871e-07 6.822361159795379 -0.2233904294407143 QKWDQK ddPTM_KYSE-520_SHP099_60min_R1 2 QKWDQK 6 1 O15371-2;O15371;B0QYA6;B0QYA5 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 0 ; 121.29 0.0088434 3989400000.0 2982500.0 2830300.0 1863240.0 1914030.0 3350200.0 3021000.0 2193720.0 2607100.0 2769100.0 2481900.0 False True 2817054.7795336493 2694328.139633085 1983347.4316894046 2095938.8357258963 3613841.6799695054 3002144.8184169508 2415482.6262440095 2598056.578601717 2266301.243330383 2459912.2968889824 1.145185047083321 1.0952943903896757 0.8062675381548021 0.8520380333789142 1.4690937089667309 1.2204275828100548 0.9819385143522545 1.0561582142125325 0.9212935136738588 1.0 21.230175449482644 QKYPEHAIHK ddPTM_KYSE-520_SHP099_60min_R1 1 QKYPEHAIHK 10 1 B1AHB1;P33992 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 0 134.75 0.0010784 1212300000.0 1073300.0 858930.0 779460.0 698860.0 1061800.0 859160.0 775510.0 813460.0 854060.0 530430.0 False True 1013761.9094294951 817665.713519786 829705.2387800954 765279.4442800789 1145357.6191844132 853797.6637507788 853906.1190482336 810638.2971229907 698984.2331005553 525730.8028682951 1.928290874148115 1.5552935248586257 1.578194076233253 1.4556488607950082 2.1786009359458163 1.6240206187132433 1.624226913069334 1.541926576682002 1.3295478014356774 1.0 19.0039647401502 -7.928959420251725 1.1607150868318081 1.0021989331459347 1.7094374700732198 0.5750876513113468 0.19557235204004264 0.35613096811479117 1.0750032751722474 0.18833705088874275 0.06033348911712813 1.1777160121894991e-08 7.928959420251725 0.7072385369272851 QLAEAHAQAK ddPTM_KYSE-520_SHP099_60min_R1 1 QLAEAHAQAK 10 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 59.542 0.067686 13781000.0 71235.0 61568.0 50143.0 48455.0 55187.0 67537.0 52566.0 58914.0 65970.0 52166.0 False True 67283.4525465481 58610.18086454792 53375.298011636696 53060.14863147301 59529.90292892284 67115.47653142195 57879.88427472175 58709.641084631 53991.51096836705 51703.849824533834 1.3013238429031184 1.1335747930463969 1.0323273449225776 1.0262320661138777 1.1513630635039385 1.2980750323078496 1.119450185453257 1.1354984451616768 1.0442454701457784 1.0 15.657984085930675 -7.851479681821739 2.5419385501115768 1.0001715947311836 1.1466656748777426 0.26415986092246435 0.08682049309932802 0.40745668029830173 5.19984478649375 0.08877167596607004 0.02459062185285003 1.4077330866771292e-08 7.851479681821739 0.14649408014655907 QLAPIWDK ddPTM_KYSE-520_SHP099_60min_R1 1 QLAPIWDK 8 0 H7BZ94;P07237;H0Y3Z3 H7BZ94 P4HB Protein disulfide-isomerase 0 86.13600000000001 0.038347000000000006 616900000.0 1619000.0 1665800.0 1359100.0 1010700.0 1569200.0 1576200.0 1630800.0 1441100.0 1845500.0 1579200.0 False True 1529190.8426035135 1585772.4675832232 1446709.760636885 1106756.624121965 1692687.1124733319 1566362.3511382958 1795657.1790742367 1436101.16045527 1510403.7212690834 1565209.516599009 0.9769879536167405 1.0131375070021902 0.9242914416853226 0.7070980673097357 1.0814444293383256 1.0007365368834402 1.1472311917550562 0.917513690803341 0.9649850101544161 1.0 20.577924356403386 QLDDLKVELSQLR ddPTM_KYSE-520_SHP099_60min_R1 2 QLDDLKVELSQLR 13 1 P42766;F2Z388 P42766 RPL35 60S ribosomal protein L35 0 ; 137.8 1.4857999999999999e-05 821030000.0 853510.0 754950.0 549880.0 524150.0 757560.0 702280.0 461560.0 503930.0 630200.0 500890.0 False True 806164.0988699965 718681.068796947 585326.1446391077 573965.0584085565 817175.6620732185 697896.8100224613 508218.9891915036 502181.98444814613 515771.5660491885 496452.50428652274 1.6238493952781567 1.4476330818993457 1.1790174076779205 1.156132869615455 1.646029892119536 1.4057675286086924 1.0237011291178622 1.0115408425018573 1.0389142195796357 1.0 18.921296175860267 -6.76241745047032 22.76907827174828 1.0195005841503144 1.4001866112185546 0.6228557930009329 0.14901761168187144 6.334352864752425 147436.45768566258 0.06469801839360735 0.04649296350628149 1.7281544322481982e-07 6.76241745047032 0.3806860270682402 QLDWRPER ddPTM_KYSE-520_SHP099_60min_R1 2 QLDWRPER 8 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 0 ; 69.954 0.025303 1297990000.0 2856000.0 2532000.0 1789360.0 1675760.0 2882000.0 2496100.0 2018830.0 2055450.0 2208700.0 2067720.0 False True 2697571.9867051514 2410358.9193905173 1904705.0086772256 1835023.726564383 3108797.0036631026 2480520.9140187157 2222913.0382820913 2048320.123695635 1807655.7567960054 2049401.6094618198 1.3162729912237863 1.1761281479736352 0.9293956830537514 0.895394888972624 1.5169291315622047 1.21036350443294 1.0846644347399708 0.9994722919308779 0.8820407617766546 1.0 20.96677129803858 -7.201467745503929 2.6092925102247126 0.9454506610260097 1.164426670965962 0.2410283803458656 0.16924068318788546 0.48276381885811903 6.374330979285573 0.11123133814209295 0.05235195509693454 6.288285546768388e-08 7.201467745503929 0.21897600993995237 QLEAIDQLHLEYAK ddPTM_KYSE-520_SHP099_60min_R1 2 QLEAIDQLHLEYAK 14 0 O43707;O43707-2;F5GXS2;O43707-3 O43707 ACTN4 Alpha-actinin-4 0 ; 202.63 4.6588999999999995e-11 1190230000.0 2466300.0 1364050.0 877540.0 1167850.0 1929300.0 1520350.0 1193610.0 1366300.0 1120020.0 1004640.0 False True 2329489.4225528403 1298518.990519209 934107.6325136431 1278842.112873094 2081124.9337846017 1510860.931704804 1314271.74731101 1361560.6241968174 916652.6014065563 995739.6711980931 2.3394562755041726 1.3040747778551456 0.9381042651335835 1.284313711569176 2.090029145148503 1.517325236110064 1.3198949337125967 1.3673861387470496 0.9205745516833956 1.0 19.92540908403649 -7.519492742993221 1.5597363405868316 0.9514748712715115 1.5344368231496082 0.2611385926435986 0.38490014315381416 0.6301758830865211 2.7259461291721454 0.36114788887968113 0.11877780746448016 3.023481092082244e-08 7.519492742993221 0.5829619518780966 QLEEPGAGTPS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 QLEEPGAGTPSPVR 14 0 Q63ZY6;Q96P11-2;Q63ZY6-4;Q63ZY6-5;Q96P11-5;Q96P11;Q96P11-4 Q63ZY6 NSUN5P2;NSUN5 Putative methyltransferase NSUN5C;Probable 28S rRNA (cytosine-C(5))-methyltransferase 1 QLEEPGAGT(0.004)PS(0.996)PVR 119.56 0.012045 0.0 1554000.0 1216300.0 1273800.0 1218500.0 903530.0 1140500.0 1087000.0 1460600.0 1669300.0 1252100.0 True False 1467796.5221778029 1157867.1222964784 1355911.18615206 1334305.873644617 974632.6706175295 1133381.716453006 1196884.5680976773 1455533.5195066016 1366197.1996285482 1241007.368119061 1.1827460173765736 0.9330058402887692 1.0925891505440082 1.0751796547888062 0.7853560709270698 0.9132755739966489 0.9644459806163289 1.1728645267535263 1.1008775892275577 1.0 20.243080250398627 -9.71596201337424 10.189152553016564 0.9999968809984677 1.017580529749206 0.000778910117317233 0.11918850281542191 0.0 0.0 0.12161824425470968 0.029496756886137433 1.9232599441736985e-10 9.71596201337424 0.017583648750738257 QLEES(ph)VSEKEQQLLSTLK ddPTM_KYSE-520_SHP099_60min_R1 1 QLEESVSEKEQQLLSTLK 18 1 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 QLEES(0.981)VS(0.019)EKEQQLLSTLK 73.389 0.014469 0.0 129280.0 111350.0 112120.0 86711.0 89833.0 111350.0 88119.0 100940.0 136090.0 99685.0 True False 122108.58068670932 106000.5788602424 119347.43459834268 94951.98736938719 96902.34602014824 110655.02334681459 97026.92847856422 100589.86269957315 111379.48654972085 98801.86845375654 1.2358934360017828 1.0728600634699046 1.207947141750688 0.9610343291617885 0.9807744280210919 1.1199689345814936 0.9820353602318456 1.0180967655146467 1.1273014194245847 1.0 16.592250704593006 -5.255922634351142 24.999525292813015 1.027854549526019 1.1622962016656777 0.5025674996186631 0.06597431372033512 397.2934766136254 1800357.992158499 0.01763056913675955 0.02950624919558828 5.547245233321964e-06 5.255922634351142 0.13444165213965875 QLENSLNEFGEKWELNSGDGAFYGPK ddPTM_KYSE-520_SHP099_60min_R1 2 QLENSLNEFGEKWELNSGDGAFYGPK 26 1 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 0 ; 298.38 2.9907e-49 441100000.0 864070.0 693050.0 436780.0 671110.0 641180.0 604800.0 544600.0 585690.0 541730.0 379010.0 False True 816138.3146191589 659754.8377107412 464935.537672709 734892.092623421 691637.21818484 601025.2188608317 599653.4827838048 583658.3780910731 443365.4879019781 375652.2662653178 2.1725898867404467 1.7562913815745913 1.2376753168429755 1.9563094878399516 1.8411634383601632 1.599950999460592 1.5962993881162375 1.553719837480878 1.1802550595790506 1.0 18.519038280335476 -7.720335539800091 0.9184432000511688 0.9847822276170303 1.7599975485643835 0.5681996701411824 0.2281907263035449 0.42225973504034636 0.746478828122401 0.22168118726076996 0.08060649839957496 1.903989110536039e-08 7.720335539800091 0.7752153209473532 QLESIGIPQFHS(ph)PVGS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 1 QLESIGIPQFHSPVGSPLK 19 0 Q16659 Q16659 MAPK6 Mitogen-activated protein kinase 6 2 QLESIGIPQFHS(1)PVGS(1)PLK 123.53 1.4101e-05 0.0 214000.0 210120.0 191510.0 209190.0 186240.0 207220.0 185670.0 193910.0 218740.0 154690.0 True False 202128.99340157653 200025.5198034499 203855.04102683402 229071.35470473333 200896.02843935322 205926.6631156439 204439.33556457766 193237.37146893403 179022.3299866701 153319.56694699894 1.3183509282376888 1.3046313904121367 1.3296087713142621 1.4940777571066388 1.310309130398216 1.3431205632535521 1.3334197300156105 1.2603568827958813 1.167641766484746 1.0 17.226182302783762 -7.9387897902405635 1.1106355365013443 1.0004856372615036 1.353900406331989 0.8262220276264636 0.05091173597750655 0.19987656150377112 0.5538647079057719 0.050376354172334714 0.01636313367070991 1.1513575409177377e-08 7.9387897902405635 0.3534147690704854 QLESLWSDS(ph)PAPPGPQAGPPSRPPR ddPTM_KYSE-520_SHP099_60min_R1 2 QLESLWSDSPAPPGPQAGPPSRPPR 25 1 Q8WUF5;K7EN03 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 QLESLWSDS(1)PAPPGPQAGPPSRPPR;QLESLWSDS(1)PAPPGPQAGPPSRPPR 175.28 9.768299999999999e-11 2840600000.0 451440.0 534210.0 460150.0 418080.0 431470.0 408540.0 385700.0 556670.0 626460.0 555740.0 True False 426397.7232766711 508545.7497344422 489812.00526603137 457814.1974996649 465424.2342715187 405990.15031978145 424690.3200692498 554739.0416977553 512710.6557714607 550816.5759591771 0.7741192656269532 0.9232578900678041 0.8892470318510041 0.831155447169395 0.8449713653969864 0.7370695945611316 0.7710194983324631 1.0071211831847067 0.9308192203160194 1.0 19.071212450202847 -7.267859241009664 24.885631292294164 0.9767276607398555 0.8283931380935902 0.6174853313772147 0.05579903540306512 373.664525320002 1448443.3271471185 0.03206315342162296 0.01599100103896184 5.3968551140179834e-08 7.267859241009664 -0.14833452264626534 QLFCWLDK ddPTM_KYSE-520_SHP099_60min_R1 2 QLFCWLDK 8 0 F5GWE5;Q00169 F5GWE5 PITPNA Phosphatidylinositol transfer protein alpha isoform 0 ; 120.07 0.0071714 74993000.0 274530.0 278250.0 262190.0 240145.0 275250.0 260510.0 182255.0 181590.0 194177.0 228830.0 False True 259301.27363801294 264882.4523382349 279091.1869188329 262968.30859777326 296910.609041731 258884.06045872223 200679.1140373893 180960.1066734248 158919.35160382921 226802.74422704632 1.1432898421124622 1.1678979160546135 1.2305458995656682 1.1594582309573933 1.3091138295244855 1.1414503000879044 0.8848178390491372 0.7978744141308552 0.7006941302471155 1.0 17.791078570884498 -6.774098665218907 3.245752868130175 0.8163518173653389 1.2019088102283233 0.8138605549130351 0.08162378964439253 0.09318441418893052 2.036168234144536 0.03478757254081585 0.023779324136495236 1.682291826079837e-07 6.774098665218907 0.3855569928629844 QLFHPEQLITGK ddPTM_KYSE-520_SHP099_60min_R1 2 QLFHPEQLITGK 12 0 Q9BQE3;F5H5D3;F8VQQ4;Q9NY65;C9J2C0;A0A1W2PQM2;Q9NY65-2;F8VVB9;F8VRZ4;F8VS66;F8VWV9;C9JQ00;C9JEV8;F8VX09;C9JJQ8;C9JDL2;C9K0S6;P68363;P68366-2;P68366;P68363-2;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1A;TUBA8;TUBA1B;TUBA4A;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain 0 ; 201.6 2.2285999999999997e-07 887880000.0 944200.0 777580.0 542230.0 628160.0 819900.0 874640.0 621950.0 725830.0 619140.0 602700.0 False True 891823.3437839649 740223.889628624 577183.0133986745 687860.1375368092 884421.465407139 869181.0473287649 684822.7756470559 723312.2651399949 506719.7832492766 597360.5468935053 1.4929398140231633 1.2391576468818717 0.9662221859147523 1.151499109062249 1.480548841075053 1.4550359106386024 1.1464144714752027 1.2108470653133772 0.8482645629752517 1.0 19.188242431401438 -7.668117370145803 4.873996277287342 0.9262317296481989 1.2663759160531358 0.41951836984203095 0.16248189901458052 0.2176930593358499 8.430320809074615 0.13154139220192665 0.04535866248000963 2.1472500911759657e-08 7.668117370145803 0.34014418640493693 QLGAQS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 1 QLGAQSPGR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 QLGAQS(1)PGR 68.132 0.044925 0.0 287980.0 250210.0 241960.0 211530.0 291420.0 267740.0 262590.0 289660.0 305890.0 299650.0 True False 272005.17532610236 238189.5360271332 257557.1287496878 231633.7476011866 314353.09604701627 266068.9353468896 289135.1598314341 288655.2370671522 250348.08685938764 296995.3341241723 0.9158567292925158 0.801997569185876 0.8672093435717224 0.7799238607039586 1.0584445610030586 0.8958690752887299 0.9735343509152508 0.9719184239657681 0.8429360939209851 1.0 18.18008074051742 -5.746964949762866 24.99998323487461 0.9534714870922811 0.8402978249306814 0.4393707331581985 0.06403789200177362 224.5473817638737 387832.6358300364 0.01797851649914923 0.0231045743372621 1.790750372777961e-06 5.746964949762866 -0.11317366216159974 QLHDDYFYHDEL ddPTM_KYSE-520_SHP099_60min_R1 5 QLHDDYFYHDEL 12 0 Q14257;Q14257-2;A8MXP8 Q14257 RCN2 Reticulocalbin-2 0 ;;;; 165.7 4.9603e-06 1885460000.0 1314470.0 1104620.0 879130.0 721120.0 1250000.0 1375130.0 992890.0 1072080.0 1130800.0 1149910.0 False True 1241553.72876902 1051552.3971315774 935800.1264577347 789655.0279873655 1348367.8884728916 1366547.3035914255 1093261.0108725887 1068361.204705353 925475.2251482413 1139722.6920164437 1.0893472047769905 0.9226388177558597 0.821077033047468 0.6928483862949818 1.183066633592514 1.1990173690177868 0.9592342229655416 0.9373869733304729 0.8120178984160199 1.0 20.12025141167936 -2.8629719105860447 15.410080085416062 0.96014082097308 1.0899623752707337 0.0 0.1548193494331952 0.0 0.0 0.038124300564712756 0.0 0.0013709704352876185 2.8629719105860447 0.12982155429765374 QLHEFS(ph)SPSHLLR ddPTM_KYSE-520_SHP099_60min_R1 1 QLHEFSSPSHLLR 13 0 Q9H3D4-10;Q9H3D4-12;Q9H3D4-2;Q9H3D4-9;Q9H3D4-11;Q9H3D4 Q9H3D4-10 TP63 Tumor protein 63 1 QLHEFS(0.657)S(0.337)PS(0.006)HLLR 112.57 9.7999e-05 440180000.0 155060.0 179120.0 147430.0 269770.0 148800.0 124070.0 119470.0 117210.0 146210.0 103350.0 True False 146458.5126955533 170514.80633539843 156933.5736963403 295408.85969069216 160509.71344381294 123295.63310857043 131547.19351483864 116803.42586701973 119661.94965416042 102434.39940508333 1.4297786050989945 1.6646244555121255 1.5320397699188582 2.8838833576060625 1.5669512817570892 1.2036545713612283 1.2842091551162118 1.1402754010897567 1.168181297973444 1.0 16.644340755372436 -6.097051683536563 4.62696234808261 1.182780689956472 1.8772460682002434 0.43948770130785764 0.379908076405977 0.2330168247914052 8.2911228756853 0.13237948606459402 0.1339621891489579 7.997390758025079e-07 6.097051683536563 0.6944653782437715 QLHEFSS(ph)PSHLLR ddPTM_KYSE-520_SHP099_60min_R1 3 QLHEFSSPSHLLR 13 0 Q9H3D4-10;Q9H3D4-12;Q9H3D4-2;Q9H3D4-9;Q9H3D4-11;Q9H3D4 Q9H3D4-10 TP63 Tumor protein 63 1 QLHEFS(0.224)S(0.766)PS(0.01)HLLR;QLHEFS(0.197)S(0.793)PS(0.011)HLLR;QLHEFS(0.177)S(0.82)PS(0.003)HLLR 167.29 5.2343e-07 1722800000.0 906390.0 1219000.0 1363420.0 2062590.0 866310.0 1029780.0 874740.0 865180.0 1207660.0 925210.0 True False 856110.7398563308 1160437.4102436958 1451308.2347491328 2258617.933459703 934483.668370361 1023352.7610425055 963167.2558397073 862178.8925145305 988379.3866311699 917013.3592024874 0.9335858973754508 1.2654531131944584 1.582646774100776 2.4630152993888648 1.019051313694129 1.1159627619083978 1.050330669857808 0.9402031975459489 1.0778244141293083 1.0 19.806583225830522 QLHLEGASLELS(ph)DDDTESK ddPTM_KYSE-520_SHP099_60min_R1 8 QLHLEGASLELSDDDTESK 19 0 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 QLHLEGASLELS(1)DDDTESK;QLHLEGASLELS(0.999)DDDT(0.001)ESK;QLHLEGASLELS(1)DDDTESK;QLHLEGASLELS(1)DDDTESK;QLHLEGASLELS(1)DDDTESK;QLHLEGASLELS(1)DDDTESK;QLHLEGASLELS(1)DDDTESK;QLHLEGASLELS(1)DDDTESK 347.71 2.6619999999999994e-65 25667600000.0 9967430.0 10794260.0 9727880.0 14663020.0 10371090.0 9040940.0 10079390.0 9456490.0 11703610.0 9220110.0 True False 9414516.78832091 10275687.547085423 10354954.709958319 16056589.012202287 11187235.77956987 8984512.139893597 11098313.106566744 9423687.643351361 9578529.447998958 9138426.998537034 1.03021195987319 1.1244481734909577 1.1331222224148683 1.75704079211584 1.2241970944628466 0.9831574013046144 1.2144664621540957 1.0312155084086128 1.0481595409726838 1.0 23.123514424245176 -6.115238013297531 6.635313416133433 1.068791689330115 1.2715975270646815 0.20889681194433118 0.19242604372701527 0.4423162429951246 22.753826949298766 0.06795148616064102 0.06812663153260673 7.669410552852442e-07 6.115238013297531 0.2028058377345665 QLHVLVPQS(ph)PPTDLPGLTR ddPTM_KYSE-520_SHP099_60min_R1 2 QLHVLVPQSPPTDLPGLTR 19 0 O95402 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 QLHVLVPQS(0.992)PPT(0.008)DLPGLTR;QLHVLVPQS(0.97)PPT(0.03)DLPGLTR 98.74 0.00041224 260000000.0 251070.0 255230.0 228510.0 176760.0 188448.0 249900.0 196205.0 230807.0 284090.0 249880.0 True False 237142.6466043634 242968.36769195952 243240.12022892738 193559.2172551682 203277.78547755195 248340.2814043016 216039.31617626932 230006.38438775894 232506.41732610887 247666.25760369826 0.9575089029036238 0.9810313687573216 0.9821286217283044 0.7815324506776004 0.8207730332115961 1.002721500325175 0.87230016016943 0.9286948759721735 0.9387892382907997 1.0 17.91803780162514 -9.487941330399945 14.25965123588921 1.0000000857133307 0.9166359549102845 0.11147376898560601 0.0689651234959362 0.0 0.0 0.07076645955996448 0.01716338750098437 3.2513121696272214e-10 9.487941330399945 -0.08336413080304617 QLIMS(ph)PLITSHVIGENEPLTSVLNK ddPTM_KYSE-520_SHP099_60min_R1 1 QLIMSPLITSHVIGENEPLTSVLNK 25 0 Q9H7D0;H0Y7N4 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 QLIMS(0.712)PLIT(0.144)S(0.144)HVIGENEPLTSVLNK 134.17 1.4313e-06 59496000.0 46571.0 66423.0 52632.0 53886.0 41283.0 47270.0 46461.0 47416.0 60398.0 38861.0 True False 43987.61379301316 63231.93937704436 56024.74293417746 59007.30923858336 44531.73723186113 46974.970396083794 51157.731295663485 47251.524962977615 49431.24570967771 38516.721773400524 1.1420393991939057 1.6416750041461745 1.4545563681088742 1.531991990017529 1.1561663397484296 1.2195993904269522 1.3281953639936404 1.2267795073777361 1.2833710511628926 1.0 15.233197297618684 -5.762858758057833 24.999947329627876 1.2208454485317362 1.4576442738032755 0.39515968315046235 0.1440268226129568 38.52268644969946 678517.1761534181 0.041796283327828476 0.05001502439407856 1.7263992630144903e-06 5.762858758057833 0.2367988252715394 QLLDS(ph)DEEQEEDEGR ddPTM_KYSE-520_SHP099_60min_R1 2 QLLDSDEEQEEDEGR 15 0 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 QLLDS(1)DEEQEEDEGR;QLLDS(1)DEEQEEDEGR 233.38 3.7832e-19 1349080000.0 1851350.0 1809340.0 1713860.0 1597890.0 1782650.0 1831720.0 1770440.0 1794230.0 2199590.0 1792050.0 True False 1748651.924925271 1722416.5905252919 1824338.157872955 1749752.9851768555 1922934.4131089612 1820287.5560379652 1949413.3530293012 1788006.2349064283 1800199.903151595 1776173.8311938047 0.9845049477786554 0.9697342457565759 1.027116899164525 0.985124853461448 1.08262737539406 1.024836378100735 1.0975352292624752 1.0066617374407947 1.0135268696879978 1.0 20.760341352098273 -5.1137793351489975 1.3932800748909535 1.038044909932956 0.9771421339677925 0.26152179495342376 0.03396720584037541 0.5830462673839822 2.1204851747360203 0.010897276754846185 0.03183402379928461 7.69521334451123e-06 5.1137793351489975 -0.06090277596516358 QLLGLQPISTVS(ph)PLHR ddPTM_KYSE-520_SHP099_60min_R1 3 QLLGLQPISTVSPLHR 16 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 QLLGLQPIS(0.001)T(0.008)VS(0.991)PLHR;QLLGLQPIST(0.001)VS(0.999)PLHR;QLLGLQPIST(0.006)VS(0.994)PLHR 150.69 4.8136e-06 1312584000.0 653032.0 733770.0 590447.0 554852.0 542604.0 654606.0 526929.0 662536.0 853270.0 666026.0 True False 616807.013172983 698518.5877887757 628508.1583686023 607584.9672576634 585303.8478055563 650520.361140234 580196.1256514636 660237.8172530645 698337.6771862764 660125.5278003864 0.9343783677450777 1.0581602413048914 0.9521040043139419 0.9204082279353835 0.8866553756159915 0.9854494845970313 0.8789178742787653 1.000170103181818 1.0578861864548963 1.0 19.332380864234295 -7.511968116050324 24.02423630434998 1.0289714761392312 0.947503068732144 0.32839410751634046 0.04969333421998286 377.53418979899266 831312.8888228752 0.030640462851188342 0.013248917791227855 3.076322656238679e-08 7.511968116050324 -0.08146840740708727 QLLLQQQQQQQVSGLKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 QLLLQQQQQQQVSGLKSPK 19 1 A0A3B3IRY1;A0A087WVT2;A0A3B3IU08;A0A3B3IU15;G5E965;C9J0F0;A0A3B3IST6;A0A3B3IUB6;A0A3B3IRS5;A0A3B3IST0;Q9H334-6;Q9H334-3;Q9H334-7;Q9H334;Q9H334-4;Q9H334-8 A0A3B3IRY1 FOXP1 Forkhead box protein P1 1 QLLLQQQQQQQVS(0.001)GLKS(0.999)PK 128.88 9.1716e-06 427750000.0 282280.0 301380.0 214170.0 245070.0 279500.0 233280.0 236260.0 280790.0 344120.0 242690.0 True False 266621.3656887709 286901.25241939706 227975.74088411606 268361.379117018 301495.0598625385 231824.01298917748 260143.46647539767 279816.0050268787 281636.48255926184 240539.955409963 1.1084285986266031 1.192738445180213 0.9477666215393065 1.1156623799137142 1.2534094776424438 0.963765095050714 1.081497940880647 1.1632828506597823 1.1708511464519737 1.0 17.875917030320064 -6.277794306793948 24.98293049363943 1.0864357687971127 1.1172324651784589 0.05273419343906838 0.09413768227161519 4486.267918459418 6852963.706699375 0.03429703382172667 0.030344216149799277 5.274796303950413e-07 6.277794306793948 0.03079669638134619 QLLLTADDR ddPTM_KYSE-520_SHP099_60min_R1 2 QLLLTADDR 9 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ; 123.86 0.005239100000000001 363860000.0 1107460.0 1250590.0 1136410.0 699600.0 1042870.0 1312430.0 975660.0 1111300.0 1055690.0 1288820.0 False True 1046026.9861332236 1190509.7792261413 1209664.80692029 766089.7736575907 1124937.93588138 1304238.6375488099 1074289.2343239922 1107445.1596793695 864003.3077792249 1277402.0574867877 0.8188705975558074 0.9319773459331968 0.9469726464197445 0.5997248627928677 0.8806451573239426 1.021008718362973 0.8409953843644123 0.8669511319389933 0.676375384488655 1.0 20.284781248671045 -10.161001376531944 4.463928351207706 1.0000272921688553 0.8482011451356347 0.13568669305007852 0.11841353533819422 3.267227977303519e-05 6.140805488243029e-06 0.11646816433044375 0.028242603427838325 6.902376160720965e-11 10.161001376531944 -0.15182614703322062 QLLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 QLLSPK 6 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 QLLS(1)PK;QLLS(1)PK;QLLS(1)PK;QLLS(1)PK;QLLS(1)PK;QLLS(1)PK 113.62 0.0087234 65643080000.0 27948500.0 26300400.0 25399500.0 21920600.0 24925200.0 27251400.0 28671800.0 30244300.0 35203400.0 29856100.0 True False 26398140.991046507 25036889.306294776 27036792.410636906 24003927.23333132 26886671.435011633 27081313.90420645 31570225.35380217 30139389.582372695 28811349.965496633 29591598.181694314 0.8920823008260732 0.8460810109871953 0.9136644882993228 0.8111737353942718 0.9085913937437831 0.9151690198658904 1.0668644917371126 1.0185117207024408 0.9736327787567638 1.0 24.81868427985594 -6.5872311281845715 4.237087343103331 1.0159051549453346 0.8742233340679508 0.7748938104640555 0.03572780296233506 0.0984941983370684 3.5552362531262403 0.014023435818864161 0.01079844710244182 2.586835854599905e-07 6.5872311281845715 -0.1416818208773838 QLLTLS(ph)SELSQAR ddPTM_KYSE-520_SHP099_60min_R1 2 QLLTLSSELSQAR 13 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 1 QLLT(0.017)LS(0.854)S(0.128)ELSQAR;QLLT(0.009)LS(0.802)S(0.186)ELS(0.003)QAR 177.93 2.8401e-07 374980000.0 615370.0 660740.0 646940.0 499800.0 552130.0 727030.0 553800.0 612990.0 684840.0 692040.0 True False 581234.1993903175 628997.0586090412 688642.7875405991 547300.8417296504 595579.4898100306 722492.3360919155 609783.508567151 610863.6807629414 560490.319411498 685909.0639989732 0.8473925041923452 0.9170268941219046 1.003985548063307 0.7979204102345404 0.8683067786532737 1.0533354551107041 0.8890150904436275 0.8905898942368485 0.8171496031029808 1.0 19.387657794837903 QLLTLSS(ph)ELSQAR ddPTM_KYSE-520_SHP099_60min_R1 1 QLLTLSSELSQAR 13 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 1 QLLT(0.025)LS(0.349)S(0.623)ELS(0.003)QAR 62.378 0.033588 309910000.0 247950.0 265510.0 218950.0 212060.0 211930.0 283520.0 199250.0 249980.0 298970.0 296440.0 True False 234195.71922392905 252754.50106136524 233063.86733238652 232214.11864183634 228607.68528324788 281750.44651359576 219392.13449260563 249112.87772577076 244684.58442038368 293813.77222683013 0.7970889773101761 0.860254096143028 0.7932367008053541 0.7903445671789762 0.7780700120032432 0.9589422727811369 0.7467047335113702 0.8478597713025195 0.8327880022978714 1.0 18.164542496803673 -13.999999999988157 0.30475670589349546 2.519616746857453 0.814520388951742 0.484511942634235 0.055289498339511044 240.35707342797036 2.2079071525771163 233.71901894341096 0.05279729845254669 1.0000000000272695e-14 13.999999999988157 -1.705096357905711 QLMEQDAS(ph)SSPSAQVIGLK ddPTM_KYSE-520_SHP099_60min_R1 1 QLMEQDASSSPSAQVIGLK 19 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5;Q9H4L5-6 OSBPL3 Oxysterol-binding protein-related protein 3 1 QLMEQDAS(0.422)S(0.284)S(0.284)PS(0.01)AQVIGLK 67.64399999999999 0.023235 117230000.0 241350.0 333440.0 234720.0 191720.0 235560.0 305170.0 233940.0 270520.0 326830.0 314840.0 True False 227961.83438070278 317421.0418963559 249850.42676527862 209941.01115727992 254097.23184693983 303265.32083293644 257588.9382343798 269581.6292598426 267485.9107138306 312050.7625418132 0.7305280478209281 1.017209633813419 0.8006723801285375 0.6727783949226815 0.8142817206315659 0.9718461136344778 0.8254712667137425 0.8639031260938517 0.8571871721607759 1.0 18.2514212115702 -6.0530917363465795 24.646429628989342 0.8905959088155169 0.8105316829914175 0.19454487618745508 0.09634845588672306 597.3017706706372 277279.83784755284 0.03267040911664209 0.03267065634762768 8.84928665946782e-07 6.0530917363465795 -0.08006422582409933 QLMEQDASS(ph)SPSAQVIGLK ddPTM_KYSE-520_SHP099_60min_R1 1 QLMEQDASSSPSAQVIGLK 19 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5;Q9H4L5-6 OSBPL3 Oxysterol-binding protein-related protein 3 1 QLMEQDAS(0.115)S(0.441)S(0.441)PS(0.002)AQVIGLK 142.97 5.0145e-07 133650000.0 180520.0 221470.0 149430.0 172120.0 147520.0 211300.0 172520.0 205590.0 233590.0 232290.0 True False 170506.19574230182 210830.24876675254 159062.49689645367 188478.2330502352 159128.98472601667 209981.19832224483 189960.0052329449 204876.85627506682 191175.9443247061 230232.09131888516 0.7405839679670919 0.915729199865279 0.6908789126019041 0.8186444903077461 0.6911676987097926 0.9120413975278902 0.8250804835449242 0.8898709780266912 0.8303618458641199 1.0 17.812729414595907 -6.282083045830955 24.98971379573034 0.880438477409928 0.7775702930442051 0.377652087932409 0.07620933267358419 993.6660688035815 1202855.8383822097 0.025424226009186236 0.022446374994957673 5.222963059017258e-07 6.282083045830955 -0.10286818436572287 QLMEQDASSS(ph)PSAQVIGLK ddPTM_KYSE-520_SHP099_60min_R1 5 QLMEQDASSSPSAQVIGLK 19 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5;Q9H4L5-6 OSBPL3 Oxysterol-binding protein-related protein 3 1 QLMEQDAS(0.002)S(0.211)S(0.787)PSAQVIGLK;QLMEQDASS(0.002)S(0.668)PS(0.331)AQVIGLK;QLMEQDASS(0.002)S(0.88)PS(0.118)AQVIGLK;QLMEQDASS(0.003)S(0.997)PSAQVIGLK;QLMEQDASS(0.003)S(0.98)PS(0.017)AQVIGLK 396.94 1.4457999999999998e-92 5365610000.0 6774130.0 8986570.0 5549090.0 5264500.0 5382760.0 8385000.0 6105790.0 7641840.0 8630070.0 7948420.0 True False 6398355.50500664 8554841.688083436 5906793.22025792 5764836.497170357 5806352.5882850755 8332666.104742175 6723022.8399679195 7615332.240658863 7063066.834360716 7878003.18257718 0.8121798578549834 1.0859149824924084 0.749783045698846 0.7317636669555737 0.7370335418404347 1.0577129650278028 0.8533917395256212 0.9666576750693331 0.8965554685204038 1.0 22.90939856910012 -6.2556053540945635 24.975146822799235 0.9464376844090072 0.8287492814269183 0.26714727927674686 0.10829042054378477 799.0121104242525 3420531.1695494372 0.03811011990970956 0.03711471957721759 5.551299336077977e-07 6.2556053540945635 -0.11768840298208894 QLMEQDASSSPS(ph)AQVIGLK ddPTM_KYSE-520_SHP099_60min_R1 1 QLMEQDASSSPSAQVIGLK 19 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3;Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-5;Q9H4L5-6 OSBPL3 Oxysterol-binding protein-related protein 3 1 QLMEQDAS(0.001)S(0.278)S(0.278)PS(0.443)AQVIGLK 176.81 3.7644e-09 1210700000.0 966600.0 1290200.0 781790.0 764310.0 885670.0 1273300.0 911300.0 1126000.0 1261700.0 1275400.0 True False 912980.7711306704 1228216.8553703187 832185.4343082272 836949.7926018195 955367.1902270294 1265352.8623933464 1003423.097430923 1122094.1688103757 1032607.084868709 1264100.948246186 0.7222372330290079 0.9716129531224126 0.6583219761545164 0.6620909459509574 0.7557681145263803 1.0009903593133898 0.7937839923489279 0.8876618361588682 0.8168707462021514 1.0 20.269680247806644 -6.206200785502977 21.621663125757287 0.8862103584409683 0.7556728319695631 0.33126021039160525 0.10269279385721096 96.20083091552144 37654.53917478346 0.03432335478808164 0.03432327379238887 6.220126462470041e-07 6.206200785502977 -0.13053752647140515 QLPALDGSLMGPES(ph)PPAQEEEAPVS(ph)PHK ddPTM_KYSE-520_SHP099_60min_R1 2 QLPALDGSLMGPESPPAQEEEAPVSPHK 28 0 A0A494C108;Q8N9T8 A0A494C108 KRI1 Protein KRI1 homolog 2 QLPALDGSLMGPES(1)PPAQEEEAPVS(1)PHK;QLPALDGSLMGPES(1)PPAQEEEAPVS(1)PHK 173.94 1.5407e-10 594100000.0 338510.0 276410.0 286040.0 305170.0 324630.0 341950.0 362320.0 332200.0 363800.0 341390.0 True False 319732.1754970453 263130.84870013135 304478.5960801819 334173.26504729415 350176.5341079643 339815.7632100878 398946.84150243824 331047.67573606275 297743.0906516898 338365.5501974008 0.9449312298799777 0.7776525965678897 0.8998510513335373 0.987610189194317 1.034905988223899 1.0042859357633807 1.1790409551731689 0.9783728737837856 0.8799450490098296 1.0 18.368223166153097 -5.245360112212352 2.947281064740128 1.0187324930532426 0.8575383701776711 0.38595893247095603 0.07875371724817751 0.2579311096177839 4.524510502060187 0.023446424385064835 0.041950532905182546 5.6838143974879275e-06 5.245360112212352 -0.16119412287557155 QLPALDGSLMGPES(ph)PPAQEEEAPVS(ph)PHKKPAPQK ddPTM_KYSE-520_SHP099_60min_R1 3 QLPALDGSLMGPESPPAQEEEAPVSPHKKPAPQK 34 2 A0A494C108;Q8N9T8 A0A494C108 KRI1 Protein KRI1 homolog 2 QLPALDGSLMGPES(1)PPAQEEEAPVS(1)PHKKPAPQK;QLPALDGSLMGPES(1)PPAQEEEAPVS(1)PHKKPAPQK;QLPALDGSLMGPES(1)PPAQEEEAPVS(1)PHKKPAPQK 312.16 1.8403999999999996e-67 3227300000.0 1077560.0 919100.0 926810.0 904290.0 952520.0 888330.0 949350.0 936960.0 1144520.0 936150.0 True False 1017785.5987373962 874945.056402774 986553.6555484323 990233.4497152985 1027477.9049025609 882785.6029607175 1045319.5627631363 933709.9044481078 936704.0190012957 927856.4393136784 1.0969214154403424 0.9429746018144335 1.0632610970272205 1.0672270059878652 1.1073673268491524 0.9514247738731014 1.1265962259596363 1.0063085892239527 1.0095355049690249 1.0 19.82354207902235 QLPALDGSLMGPES(ph)PPAQEEEAPVS(ph)PHKKPAPQKR ddPTM_KYSE-520_SHP099_60min_R1 1 QLPALDGSLMGPESPPAQEEEAPVSPHKKPAPQKR 35 3 A0A494C108;Q8N9T8 A0A494C108 KRI1 Protein KRI1 homolog 2 QLPALDGSLMGPES(1)PPAQEEEAPVS(1)PHKKPAPQKR 109.52 0.00049195 291200000.0 398260.0 371730.0 338400.0 323530.0 319960.0 336260.0 283460.0 280420.0 424520.0 304180.0 True False 376167.72388837265 353871.5328218948 360213.805459144 354278.19392715895 345139.0316766293 334161.27661068627 312114.9031030064 279447.2884705201 347437.8692783269 301485.20184845896 1.2477153823206644 1.17376087002694 1.194797632688469 1.1751097292836161 1.1447959288234415 1.108383677082273 1.0352577877433946 0.9269021721702408 1.1524209717363374 1.0 18.201727664808313 -6.341034077812584 1.3240100719301144 1.0205278287732995 1.1987259903145435 0.6500241713172612 0.0556014277084134 0.26205780247266836 0.9308895150024702 0.02664475995729915 0.022465503312039142 4.5600113347765505e-07 6.341034077812584 0.17819816154124402 QLPALDGSLMGPESPPAQEEEAPVS(ph)PHKKPAPQK ddPTM_KYSE-520_SHP099_60min_R1 2 QLPALDGSLMGPESPPAQEEEAPVSPHKKPAPQK 34 2 A0A494C108;Q8N9T8 A0A494C108 KRI1 Protein KRI1 homolog 1 QLPALDGSLMGPESPPAQEEEAPVS(1)PHKKPAPQK;QLPALDGSLMGPESPPAQEEEAPVS(1)PHKKPAPQK 218.27 1.1182e-22 1061090000.0 388410.0 413820.0 331960.0 310020.0 333950.0 412540.0 346040.0 401790.0 440470.0 444890.0 True False 366864.1230238608 393939.4660435167 353358.67275477963 339484.20758908824 360229.9650844182 409965.18483605736 381021.10022495023 400396.2842684914 360491.75134510634 440948.62071918295 0.8319883673193239 0.893390856742006 0.8013601951593704 0.7698951570262149 0.816943172419695 0.9297345894118187 0.8640940969573927 0.908033873913584 0.8175368612269334 1.0 18.750251037358 -6.24670545688233 24.26891903463865 0.8956453893691388 0.8225210738087224 0.36832727595175985 0.05259505640754592 681.762633847449 1122962.6927054746 0.01727989551095446 0.017202691593937464 5.666234487775578e-07 6.24670545688233 -0.07312431556041643 QLPLEPES(ph)PSGQVGPR ddPTM_KYSE-520_SHP099_60min_R1 8 QLPLEPESPSGQVGPR 16 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPES(0.999)PS(0.001)GQVGPR;QLPLEPES(0.988)PS(0.012)GQVGPR;QLPLEPES(0.999)PS(0.001)GQVGPR;QLPLEPES(0.998)PS(0.002)GQVGPR;QLPLEPES(0.996)PS(0.004)GQVGPR;QLPLEPES(0.984)PS(0.016)GQVGPR;QLPLEPES(0.999)PS(0.001)GQVGPR;QLPLEPES(0.974)PS(0.026)GQVGPR 319.33 2.7635e-47 10234200000.0 5380350.0 5985890.0 4419870.0 3918580.0 4028910.0 5622380.0 4405030.0 6605830.0 6116380.0 6896230.0 True False 5081891.260038182 5698318.859395935 4704781.892242035 4291000.665035962 4345962.295637857 5587288.640904033 4850333.421349871 6582915.917542306 5005799.573392475 6835134.7673857575 0.7434954003082311 0.8336805422748641 0.6883232082988583 0.6277858171152266 0.6358268627525632 0.8174364999449761 0.7096178182899214 0.9630996522487123 0.7323629663131059 1.0 22.704538352850072 -7.246625509186482 24.58893592284877 0.8857984810699041 0.7219827360402371 0.4404493447525367 0.09065996220841223 626.8331595530029 1040457.1844890683 0.04320726979333931 0.0248016593327963 5.6672776603431554e-08 7.246625509186482 -0.163815745029667 QLPLEPES(ph)PSGQVGPRPAPPQEES(ph)PSSEAK ddPTM_KYSE-520_SHP099_60min_R1 3 QLPLEPESPSGQVGPRPAPPQEESPSSEAK 30 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 QLPLEPES(0.932)PS(0.068)GQVGPRPAPPQEES(0.824)PS(0.143)S(0.033)EAK;QLPLEPES(0.956)PS(0.044)GQVGPRPAPPQEES(0.678)PS(0.282)S(0.04)EAK;QLPLEPES(0.908)PS(0.092)GQVGPRPAPPQEES(0.898)PS(0.085)S(0.017)EAK 161.66 3.7298000000000004e-10 1122560000.0 1660880.0 1664240.0 1525440.0 1399180.0 1418290.0 1279030.0 1188620.0 1413300.0 2001840.0 1325780.0 True False 1568747.6755178042 1584287.412324831 1623772.3031902986 1532157.646521194 1529901.3540337763 1271047.0993379103 1308777.3094133034 1408397.5921666995 1638356.3182797646 1314034.6206412327 1.1938404444414674 1.2056664165756288 1.2357150090900328 1.1659948851069997 1.1642778127772642 0.9672858533344083 0.9959991075232373 1.0718116326945928 1.2468136627026363 1.0 20.325571855920064 -6.072148029743152 6.0343068054235545 1.0570470656550515 1.1990322440997625 0.4698225456321622 0.07336967314154122 0.22147730057524348 14.441976550642147 0.025508006811407673 0.025740819860482007 8.469386849711839e-07 6.072148029743152 0.14198517844471104 QLPLEPES(ph)PSGQVGPRPAPPQEESPS(ph)SEAK ddPTM_KYSE-520_SHP099_60min_R1 1 QLPLEPESPSGQVGPRPAPPQEESPSSEAK 30 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 QLPLEPES(0.847)PS(0.131)GQVGPRPAPPQEES(0.389)PS(0.579)S(0.054)EAK 71.794 0.0032813000000000004 255820000.0 236300.0 218470.0 250220.0 215800.0 221140.0 216490.0 207430.0 233450.0 297670.0 204760.0 True False 223191.96794762838 207974.3732698447 266349.5815661554 236309.56711736415 238542.45988551638 215138.80560711175 228399.04872171223 232640.2164376396 243620.63165005072 202945.9857008694 1.0997604469821856 1.0247769747778448 1.3124161123282292 1.1643963604467187 1.175398759732622 1.0600791381220709 1.1254179181368935 1.1463159304887054 1.2004210421246437 1.0 17.630736278051007 -6.197048941119107 24.99869521472963 1.1167761305976012 1.1573241933690352 0.071832631875282 0.08373024627885033 757.3686342408115 294036.32929621194 0.02837048007280502 0.028370479178516747 6.352593397496751e-07 6.197048941119107 0.04054806277143408 QLPLEPESPSGQVGPRPAPPQEES(ph)PSSEAK ddPTM_KYSE-520_SHP099_60min_R1 3 QLPLEPESPSGQVGPRPAPPQEESPSSEAK 30 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QLPLEPESPSGQVGPRPAPPQEES(0.999)PS(0.001)SEAK;QLPLEPESPSGQVGPRPAPPQEES(0.999)PS(0.001)SEAK;QLPLEPESPSGQVGPRPAPPQEES(0.998)PS(0.001)SEAK 266.03 2.0698000000000003e-41 2171630000.0 1737470.0 2300410.0 1797050.0 1324630.0 1442310.0 1874280.0 1295140.0 1738170.0 2457210.0 1848140.0 True False 1641089.0755394232 2189894.850614194 1912890.71838166 1450522.436935468 1555811.5913786716 1862581.9232911344 1426065.3905483235 1732140.693961929 2011042.6052233023 1831766.9174311648 0.8959049647216336 1.1955095540677527 1.044287185328285 0.7918706376516796 0.8493501965634974 1.0168225583543042 0.7785190227958755 0.9456119539439277 1.0978703600802826 1.0 20.80480450918951 -5.034437824746267 23.26364442379065 0.9179459311955667 1.0642549934992263 0.17597700537540317 0.11630020448565927 359.10937355671086 242587.81379411326 0.03111491849791419 0.05394656276822303 9.23766428877104e-06 5.034437824746267 0.1463090623036596 QLQAYEVEYHVLQEELIDS(ph)SPLSDNQR ddPTM_KYSE-520_SHP099_60min_R1 1 QLQAYEVEYHVLQEELIDSSPLSDNQR 27 0 Q86TI0-2;Q86TI0;H0Y8P0;A0JNU9 Q86TI0-2 TBC1D1 TBC1 domain family member 1 1 QLQAYEVEYHVLQEELIDS(0.544)S(0.455)PLS(0.001)DNQR 106.58 0.00087044 27805000.0 45179.0 49697.0 36797.0 39387.0 35518.0 43345.0 37272.0 36343.0 54931.0 35416.0 True False 42672.830807896346 47309.48152328217 39168.99349728169 43130.32863786664 38313.064530224176 43074.46777698864 41039.81749966573 36216.934615519946 44956.91509782285 35102.24179323104 1.2156725219790714 1.3477623965431496 1.115854472429589 1.2287058157688293 1.0914705891408991 1.2271144398901306 1.1691508975811244 1.0317556020739351 1.2807419925667578 1.0 15.099275550270129 -13.99999999666614 0.031208908294673886 4.379250426389848e-07 1.8528738974866996 0.3185324292951305 0.08648645332642671 1536.5928080708193 3.599003565573054 169.68975696054216 66.21566503412632 1.0000000076764951e-14 13.99999999666614 1.852873459561657 QLQDKLNES(ph)DEQHQENEGTNQLVMGIQK ddPTM_KYSE-520_SHP099_60min_R1 1 QLQDKLNESDEQHQENEGTNQLVMGIQK 28 1 Q15545 Q15545 TAF7 Transcription initiation factor TFIID subunit 7 1 QLQDKLNES(1)DEQHQENEGTNQLVMGIQK 141.65 1.2482e-06 870590000.0 339780.0 400700.0 342930.0 291540.0 345070.0 319660.0 323480.0 316170.0 389430.0 263680.0 True False 320931.72606536275 381449.7705370378 365035.8165074004 319247.8739453027 372225.0458202727 317664.88336814335 356180.5152605673 315073.28006463306 318719.32873141154 261344.00033993603 1.228004949981326 1.4595696478238547 1.3967637138506723 1.2215619012873828 1.4242723970556477 1.2155047866220363 1.362880015601182 1.2055883420120996 1.2195394893965277 1.0 17.995590514242846 -8.356666906645637 0.46195245685576763 0.9788914007801592 1.3562791301230621 0.5903676171148224 0.08369259617371848 1.1232327454405984 0.49795484377512184 0.12908819882769082 0.04846501291071125 4.398788625302331e-09 8.356666906645637 0.3773877293429029 QLQPASELWS(ph)SDGAAGLVGSLQEVTIHEK ddPTM_KYSE-520_SHP099_60min_R1 1 QLQPASELWSSDGAAGLVGSLQEVTIHEK 29 0 Q9H1A4;F8WAS1 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 QLQPAS(0.018)ELWS(0.491)S(0.491)DGAAGLVGSLQEVTIHEK 89.96799999999999 0.00098903 29211000.0 32445.0 35661.0 33168.0 34914.0 32693.0 34418.0 29537.0 29693.0 43867.0 27564.0 True False 30645.21117249602 33947.79203174773 35306.06235067637 38232.21606272312 35265.753102275405 34203.18449529113 32522.888213340484 29590.001913398286 35901.858597079874 27319.804404467515 1.1217214705784904 1.2426074333898367 1.292324858112926 1.3994322761868359 1.290849399218558 1.2519556871240995 1.190450990491796 1.0830971362503434 1.3141330759750596 1.0 14.737659534271344 -6.818393549748151 2.8945474071359194 1.147005155426344 1.2756309027051507 0.27465107928889654 0.09729084681612238 0.37605562303462187 6.396638177164225 0.04512640684906214 0.02955376496805128 1.5191702613821819e-07 6.818393549748151 0.1286257472788066 QLQPASELWSS(ph)DGAAGLVGS(ph)LQEVTIHEK ddPTM_KYSE-520_SHP099_60min_R1 3 QLQPASELWSSDGAAGLVGSLQEVTIHEK 29 0 Q9H1A4;F8WAS1 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 2 QLQPASELWS(0.016)S(0.984)DGAAGLVGS(1)LQEVTIHEK;QLQPAS(0.007)ELWS(0.154)S(0.839)DGAAGLVGS(0.744)LQEVT(0.256)IHEK;QLQPASELWS(0.114)S(0.886)DGAAGLVGS(1)LQEVTIHEK 198.53 8.602000000000001e-16 1088310000.0 492954.0 504558.0 440668.0 468631.0 495657.0 498142.0 441377.0 445866.0 572650.0 451261.0 True False 465608.8589405641 480318.2763230018 469074.16437372926 513169.54934095184 534662.3859974461 495032.9110016071 485995.69458440493 444319.39491190633 468671.19533174875 447263.1786157451 1.0410176406240232 1.0739052515111134 1.0487654401274167 1.1473547876871584 1.1954089036620381 1.1068045273337874 1.0865989373159106 0.9934182292560957 1.0478644738479486 1.0 18.77076446636961 -7.143460907583399 4.570300389870927 1.015893049029685 1.1041929872835778 0.43951321343697214 0.04475245235627866 0.24220695122328492 7.954556493095601 0.02465029085203042 0.013799399274758269 7.186858469806367e-08 7.143460907583399 0.08829993825389293 QLQPASELWSS(ph)DGAAGLVGSLQEVTIHEK ddPTM_KYSE-520_SHP099_60min_R1 6 QLQPASELWSSDGAAGLVGSLQEVTIHEK 29 0 Q9H1A4;F8WAS1 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 QLQPASELWS(0.217)S(0.783)DGAAGLVGSLQEVTIHEK;QLQPASELWS(0.033)S(0.967)DGAAGLVGSLQEVTIHEK;QLQPASELWS(0.055)S(0.945)DGAAGLVGSLQEVTIHEK;QLQPASELWS(0.165)S(0.835)DGAAGLVGSLQEVTIHEK;QLQPASELWS(0.02)S(0.98)DGAAGLVGSLQEVTIHEK;QLQPAS(0.002)ELWS(0.372)S(0.626)DGAAGLVGSLQEVTIHEK 230.11 2.1915e-23 2257984000.0 1421894.0 1597362.0 1492373.0 1350608.0 1396975.0 1538502.0 1255977.0 1280966.0 1827237.0 1288560.0 True False 1343018.705344585 1520622.331830755 1588573.751461225 1478969.378244898 1506908.984799534 1528899.638339658 1382943.4123142764 1276522.627925713 1495456.8216963192 1277144.3608845093 1.0515794036113923 1.1906424820899815 1.2438482289981923 1.158028351016334 1.1799049746857881 1.1971235869379646 1.0828403230442125 0.9995131850573528 1.1709379671540134 1.0 20.28449017734132 -6.852188649384406 5.287769896718954 1.0601565865045894 1.1741784788129157 0.40454952069226124 0.06378726343373599 0.2070461561813019 9.36270033654741 0.026545840810545715 0.01780034380912506 1.4054368960665866e-07 6.852188649384406 0.11402189230832627 QLQPASELWSSDGAAGLVGS(ph)LQEVTIHEK ddPTM_KYSE-520_SHP099_60min_R1 1 QLQPASELWSSDGAAGLVGSLQEVTIHEK 29 0 Q9H1A4;F8WAS1 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 QLQPASELWSSDGAAGLVGS(1)LQEVTIHEK 221.47 1.0935e-22 77171000.0 69848.0 65620.0 68677.0 69963.0 59693.0 60324.0 47912.0 68050.0 90411.0 70617.0 True False 65973.39220146411 62467.51670237186 73104.02930708515 76612.26248485707 64390.49949328987 59947.49553994835 52755.41253605881 67813.95043298948 73994.64147583811 69991.38831919468 0.9425929930207049 0.892502895034596 1.0444717709226643 1.0945955541768653 0.9199774577929211 0.8564981632677251 0.753741478815487 0.968889917195598 1.057196367335745 1.0 16.094889804557322 -5.962633852305832 24.96828908741829 0.9115601271068176 0.992127388782232 0.10181845355015073 0.09266883586677185 357.5385934549574 238907.9556859199 0.031233203253565944 0.035415059502204436 1.0898485424037823e-06 5.962633852305832 0.08056726167541439 QLS(ph)ALHR ddPTM_KYSE-520_SHP099_60min_R1 1 QLSALHR 7 0 A0A2R8YEM3;E7EQV9;E7ENU7;P61313;E7EX53;A0A2R8Y738;P61313-2 A0A2R8YEM3 RPL15 Ribosomal protein L15;60S ribosomal protein L15 1 QLS(1)ALHR 58.63 0.047444 332460000.0 390340.0 341920.0 362300.0 316000.0 330300.0 364080.0 321080.0 332540.0 411330.0 308500.0 True False 368687.06207650184 325493.649967617 385654.43770049576 346032.5449911355 356292.7308500769 361807.64167138096 353537.89983882447 331386.4963554195 336642.8407854848 305766.93000936805 1.2057780809232903 1.0645155444300158 1.2612692866709951 1.1316872788713082 1.1652428561818664 1.1832791782299543 1.156233278163838 1.0837878914677481 1.1009785812192665 1.0 18.222072855983768 -7.893144835115961 0.8861942593013422 1.0029674801481534 1.1683949444832804 0.5266418120467251 0.04943785309155952 0.44052591339617403 0.7790178070195644 0.04458638182213211 0.016000054351340796 1.2789547077984135e-08 7.893144835115961 0.165427464335127 QLS(ph)LEGSGLGVEDLK ddPTM_KYSE-520_SHP099_60min_R1 6 QLSLEGSGLGVEDLK 15 0 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 QLS(1)LEGSGLGVEDLK;QLS(1)LEGSGLGVEDLK;QLS(1)LEGSGLGVEDLK;QLS(1)LEGSGLGVEDLK;QLS(1)LEGSGLGVEDLK;QLS(0.999)LEGS(0.001)GLGVEDLK 207.82 5.4715e-14 1548100000.0 1505110.0 1377340.0 1300070.0 1112930.0 1211780.0 1564910.0 1558050.0 1757560.0 1621900.0 1676200.0 True False 1421618.5479376 1311170.5189705114 1383874.592385548 1218702.5325853943 1307140.1919149437 1555142.81621611 1715552.8991026569 1751463.4345775887 1327403.8447717857 1661350.1720638652 0.855700725736555 0.7892198411979986 0.8329818816381049 0.7335615050205956 0.7867939064833678 0.9360716616919985 1.0326257088663353 1.0542409806367175 0.7989910056847173 1.0 20.663924759575238 -6.347187507153635 4.158304981596707 0.976491579634607 0.7971164546137542 0.5748476509902825 0.0710971810869154 0.16490830703683748 5.228493672229493 0.025673361349884124 0.02260016308998312 4.495857038271326e-07 6.347187507153635 -0.17937512502085273 QLS(ph)LEGSGLGVEDLKDNTPSGK ddPTM_KYSE-520_SHP099_60min_R1 7 QLSLEGSGLGVEDLKDNTPSGK 22 1 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 QLS(0.996)LEGS(0.004)GLGVEDLKDNTPSGK;QLS(0.962)LEGS(0.038)GLGVEDLKDNTPSGK;QLS(0.999)LEGS(0.001)GLGVEDLKDNTPSGK;QLS(0.996)LEGS(0.004)GLGVEDLKDNTPSGK;QLS(1)LEGSGLGVEDLKDNTPSGK;QLS(1)LEGSGLGVEDLKDNTPSGK;QLS(0.681)LEGS(0.319)GLGVEDLKDNTPSGK 226.57 4.3485000000000004e-20 5078970000.0 3794920.0 3751310.0 3522540.0 2916590.0 3092910.0 3940810.0 3472370.0 3874860.0 4954510.0 3920230.0 True False 3584408.222614533 3571091.4367688955 3749608.564663278 3193781.8366952394 3336304.4207493584 3916213.943020756 3823391.0466654445 3861419.015059123 4054895.877033262 3885499.8120927922 0.9225089167315937 0.9190816135557728 0.9650260573925182 0.8219745183760587 0.8586551491691803 1.0079048082391802 0.9840152442591691 0.9938023939780609 1.0435969818897586 1.0 21.889668761277044 -6.273872852610823 24.555883282702954 1.0041110049193178 0.8982122758628142 0.6623897470629155 0.038687781388339275 417.39718328283254 824349.5178266714 0.01468289878853255 0.013044748238956988 5.3226406617543e-07 6.273872852610823 -0.10589872905650366 QLS(ph)MTLR ddPTM_KYSE-520_SHP099_60min_R1 1 QLSMTLR 7 0 E5RJM2;E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RIY8;E5RIU4;E5RJQ8;E5RGV7 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 QLS(0.97)MT(0.03)LR 108.26 0.0033211 152770000.0 228810.0 218000.0 196320.0 199550.0 223660.0 206810.0 190810.0 216390.0 229560.0 204520.0 True False 216117.45317857352 207526.95277532894 208975.10132310638 218515.17200310485 241260.7695486779 205519.22207772566 210098.9369261436 215639.3935958055 187877.6907366734 202708.11191415248 1.0661509849694615 1.02377231387374 1.0309163227350664 1.0779794155235716 1.190188035744976 1.0138677734059487 1.036460430429746 1.0637926206284702 0.9268385412037194 1.0 17.62904429774657 -7.748427880350442 24.989995451397068 0.9634192818080949 1.0627522816149795 0.3898759318250661 0.04977408666245978 209.72444694840806 402803.48202709225 0.03560997583992795 0.013278329835755796 1.7847283388305048e-08 7.748427880350442 0.09933299980688459 QLS(ph)PQSK ddPTM_KYSE-520_SHP099_60min_R1 8 QLSPQSK 7 0 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 QLS(0.998)PQS(0.002)K;QLS(1)PQSK;QLS(0.997)PQS(0.003)K;QLS(0.999)PQS(0.001)K;QLS(0.994)PQS(0.006)K;QLS(0.995)PQS(0.005)K;QLS(0.938)PQS(0.062)K;QLS(1)PQSK 115.7 0.0027411 24813200000.0 30060200.0 26756800.0 24679900.0 22370000.0 24401830.0 28653800.0 25797900.0 25360120.0 31741000.0 27669300.0 True False 28392700.782476958 25471363.16522439 26270805.84323618 24496038.07421426 26322115.1935796 28474961.005612567 28405803.495241087 25272151.66281653 25977634.52549553 27424171.528389663 1.0353166276357582 0.9287924391391836 0.9579434629790179 0.8932280068645216 0.959814416502274 1.0383161794380962 1.0357944073473735 0.9215283545267593 0.9472532104972918 1.0 24.70894470234457 -6.016956241944417 24.781993543507028 0.9880072133335586 0.9491012468085349 0.11086395783227154 0.04699394175689238 1461.9090548877064 2136619.25801733 0.01612456016748924 0.016522041800593846 9.61709172093313e-07 6.016956241944417 -0.03890596652502365 QLS(ph)SGVSEIR ddPTM_KYSE-520_SHP099_60min_R1 13 QLSSGVSEIR 10 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 QLS(0.786)S(0.214)GVSEIR;QLS(0.5)S(0.5)GVSEIR;QLS(0.977)S(0.023)GVSEIR;QLS(0.847)S(0.153)GVS(0.001)EIR;QLS(0.955)S(0.045)GVSEIR;QLS(0.9)S(0.098)GVS(0.002)EIR;QLS(0.497)S(0.497)GVS(0.007)EIR;QLS(0.91)S(0.089)GVS(0.001)EIR;QLS(0.91)S(0.089)GVSEIR;QLS(0.5)S(0.5)GVS(0.001)EIR;QLS(0.5)S(0.5)GVSEIR;QLS(0.882)S(0.115)GVS(0.003)EIR;QLS(0.5)S(0.5)GVSEIR 182.03 8.170399999999999e-06 135334640000.0 26134850.0 21904750.0 21224400.0 19431540.0 21466130.0 24530900.0 24877210.0 29374090.0 33238080.0 24806710.0 True False 24685097.771968164 20852412.930299953 22592558.78424073 21278307.719294474 23155392.305427667 24377793.55382465 27392041.164972626 29272198.13775415 27202882.535811167 24586941.848728362 1.0039921973152948 0.8481092548473425 0.9188844600211725 0.8654312459926767 0.9417760227315649 0.9914935213907242 1.1140889881101397 1.1905587249464336 1.1063955291055485 1.0 24.551388966284776 -6.5540595392598675 2.2575994132054515 1.1204991008947907 0.9082915351904228 0.6826965642793753 0.059573653089890155 0.15676173357033168 1.6131780068199157 0.025088688564871852 0.01902576935374991 2.7921610258808214e-07 6.5540595392598675 -0.21220756570436783 QLS(ph)VS(ph)DR ddPTM_KYSE-520_SHP099_60min_R1 1 QLSVSDR 7 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 2 QLS(1)VS(1)DR 70.1 0.037634 2566100000.0 1549300.0 1408600.0 1392700.0 1671000.0 1687600.0 1680200.0 1652600.0 1751200.0 2027800.0 1524200.0 True False 1463357.24054702 1340928.7416482938 1482475.6703987888 1829811.3375955324 1820404.5188694834 1669713.248561457 1819660.9358217323 1745125.495933151 1659602.6366781085 1510696.7738096556 0.9686637754952933 0.8876226949679366 0.9813191476276876 1.211236675233732 1.2050098672540426 1.1052603523808393 1.2045176552756744 1.1551792035223034 1.0985676711898602 1.0 20.526782681963386 -5.124954718425853 4.722897103203518 1.1498088940532918 0.929583906015285 0.6629323727963778 0.06373183555286262 0.11801651550091452 4.005922536938277 0.01671189371640737 0.03010585970865459 7.499724008866777e-06 5.124954718425853 -0.22022498803800683 QLSES(ph)ESSLEMDDERYFNEMSAQGLRPR ddPTM_KYSE-520_SHP099_60min_R1 5 QLSESESSLEMDDERYFNEMSAQGLRPR 28 2 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 QLSES(0.992)ES(0.008)SLEMDDERYFNEMSAQGLRPR;QLS(0.003)ES(0.802)ES(0.185)S(0.01)LEMDDERYFNEMSAQGLRPR;QLS(0.172)ES(0.716)ES(0.042)S(0.07)LEMDDERYFNEMSAQGLRPR;QLS(0.001)ES(0.998)ES(0.001)SLEMDDERYFNEMSAQGLRPR;QLS(0.016)ES(0.983)ES(0.001)SLEMDDERYFNEMSAQGLRPR 282.27 4.1283e-52 882940000.0 48575.9 81671.2 63052.3 44193.9 40326.3 54013.7 56340.4 61244.1 77630.0 48896.0 True False 45881.2979933441 77747.59296102962 67116.75214524686 48394.07496861944 43499.750384739535 53676.580462935286 62035.837461315954 61031.65851158041 63534.34889304744 48462.819480512335 0.9467319170687891 1.604273003395792 1.3849122454015612 0.9985814999492438 0.8975901701763652 1.107582700270245 1.2800707454972062 1.2593501402889324 1.310991592608342 1.0 15.564590720208011 -11.368022554061412 1.8815484544096528 9.329011103214211e-05 1.2030180316128802 0.07703807816047514 0.20608999293202016 4618736.405607408 530346.4300207172 19561660.72081009 0.05530508612791544 4.285262653168979e-12 11.368022554061412 1.202924741501848 QLSES(ph)FK ddPTM_KYSE-520_SHP099_60min_R1 9 QLSESFK 7 0 Q08945 Q08945 SSRP1 FACT complex subunit SSRP1 1 QLS(0.029)ES(0.971)FK;QLS(0.054)ES(0.946)FK;QLSES(1)FK;QLSES(1)FK;QLSES(1)FK;QLS(0.001)ES(0.999)FK;QLS(0.001)ES(0.999)FK;QLS(0.001)ES(0.999)FK;QLS(0.037)ES(0.963)FK 112.85 0.0028771 34095630000.0 33687680.0 30253580.0 29958370.0 28337120.0 29986780.0 27154070.0 29451420.0 28929560.0 34681940.0 29076170.0 True False 31818957.23567486 28800152.60525063 31889534.46528681 31030271.36493418 32346568.984560963 26984591.376839157 32428656.95176019 28829210.108570058 28384573.956559792 28818577.75471797 1.1041126840642124 0.9993606502852376 1.106561702548492 1.0767454115550212 1.122420726653154 0.9363609684874694 1.125269165875169 1.0003689409637972 0.9849401382034849 1.0 24.780495802054315 -7.442380185815684 11.266053264146047 0.9925270820607053 1.0636026678896835 0.2576595499802594 0.055993372353712226 1.000890980578501 137.26726048068952 0.029296924041788235 0.014053485072152044 3.610936192040148e-08 7.442380185815684 0.07107558582897822 QLSLEGS(ph)GLGVEDLKDNTPSGK ddPTM_KYSE-520_SHP099_60min_R1 1 QLSLEGSGLGVEDLKDNTPSGK 22 1 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 QLS(0.004)LEGS(0.996)GLGVEDLKDNTPSGK 177.8 3.304e-10 3877300000.0 853990.0 741860.0 810380.0 627530.0 631270.0 776200.0 718620.0 818200.0 960840.0 757640.0 True False 806617.472313142 706219.9320454386 862618.3914538448 687170.2625262252 680947.3575650267 771355.447883229 791265.1226553392 815361.8551693152 786375.6768053032 750927.8990350014 1.074161012461657 0.9404630364020089 1.1487366397790975 0.9150948625151502 0.9068079085090527 1.0272030761867799 1.053716506833977 1.0858057827084548 1.047205301355636 1.0 19.518314867265232 -6.517744271113689 23.124371347081293 1.051922054065327 0.9947048049725105 0.09581017026945027 0.07135428959646402 191.5248131295171 862600.1981571697 0.026984858092084802 0.02156745663580282 3.0356781792328035e-07 6.517744271113689 -0.05721724909281645 QLSLTMMAQWTHFARTGDPNSK ddPTM_KYSE-520_SHP099_60min_R1 1 QLSLTMMAQWTHFARTGDPNSK 22 1 A0A0C4DFY7;Q6UWW8-2;Q6UWW8 A0A0C4DFY7 CES3 Carboxylic ester hydrolase;Carboxylesterase 3 0 44.105 0.056406 1591900000.0 880010.0 810930.0 799820.0 808300.0 792470.0 996600.0 1121900.0 1043700.0 1032500.0 905320.0 False True 831194.0910435565 771971.7055692549 851377.6769572466 885120.5889757427 854832.8804624903 990379.8497300011 1235312.600688854 1040079.6483014105 845024.0272068979 897299.5691283017 0.9263284187810715 0.8603277346039531 0.9488221172159185 0.9864270745561703 0.9526727860718059 1.1037337850191145 1.3767003163602556 1.1591219745171784 0.9417412604218813 1.0 19.77523019285182 -6.281419879873118 4.060931510637355 1.145462474094189 0.9324099639339469 0.38802058037819265 0.11195501596497262 0.2167238359843252 8.401556871267722 0.04162543672958331 0.038173409448976715 5.230944595307165e-07 6.281419879873118 -0.21305251016024207 QLSMT(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 2 QLSMTLR 7 0 E5RJM2;E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RIY8;E5RIU4;E5RJQ8;E5RGV7 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 QLS(0.128)MT(0.872)LR;QLS(0.444)MT(0.556)LR 94.309 0.030747000000000003 751230000.0 539350.0 630010.0 545390.0 516780.0 586030.0 575580.0 562140.0 583020.0 604330.0 535810.0 True False 509431.18033243116 599743.3739357104 580546.7120548536 565894.615824427 632147.2269454149 571987.5917194401 618966.5971577081 580997.6396978904 494598.90591955837 531063.1402538725 0.9592666892469692 1.1293259284555235 1.0931783210887611 1.065588200216463 1.1903428783312273 1.0770613668386095 1.1655235512331241 1.0940274247241992 0.9313372901066292 1.0 19.018523873537372 -7.749676682885885 23.473166059893792 0.9656686839097094 1.1014654951078207 0.42248361385414124 0.06112557446263407 80.6135015726332 160874.05679185133 0.04050845694864495 0.01498833675661303 1.7796037700261465e-08 7.749676682885885 0.13579681119811127 QLSS(ph)GVSEIR ddPTM_KYSE-520_SHP099_60min_R1 1 QLSSGVSEIR 10 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 QLS(0.048)S(0.952)GVSEIR 141.45 0.00023294 515760000.0 675250.0 575630.0 618050.0 485320.0 572320.0 538790.0 552690.0 724280.0 849970.0 645340.0 True False 637792.5364224972 547975.8707617546 657890.4919149644 531444.6668832208 617358.327944645 535427.2117559976 608561.2989345953 721767.641728222 695636.8740000448 639622.7896669218 0.9971385427880428 0.856717239620415 1.0285601178431358 0.8308720006051787 0.9651912625973335 0.8370983967516492 0.9514377985992314 1.1284270250972084 1.087573621887819 1.0 19.286861817185194 -7.141887103233179 5.231173663988539 1.0797828177659767 0.9177653544903109 0.4939884130585289 0.0690333468841577 0.16657105868783262 6.422447222216274 0.030990572489330084 0.0175705159814385 7.212949586208747e-08 7.141887103233179 -0.1620174632756658 QLTACPELPHNVQEILGLAPPAEPHS(ph)PSPT(ph)ASPLPLS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 1 QLTACPELPHNVQEILGLAPPAEPHSPSPTASPLPLSPTR 40 0 Q9HA65-2;Q9HA65 Q9HA65-2 TBC1D17 TBC1 domain family member 17 3 QLTACPELPHNVQEILGLAPPAEPHS(0.986)PS(0.175)PT(0.807)AS(0.133)PLPLS(0.75)PT(0.149)R 121.74 2.3316999999999997e-05 70025000.0 140950.0 127400.0 126240.0 108130.0 110470.0 130280.0 126750.0 137730.0 167600.0 118680.0 True False 133131.22252314104 121279.51276870139 134377.6323911417 118406.64268953008 119163.36051168031 129466.87419508777 139563.12696079185 137252.24677642382 137168.06485218028 117628.58753164271 1.1317930897310828 1.0310377376254438 1.1423892372676276 1.0066145073592596 1.0130476188845228 1.1006412379155748 1.1864728625024816 1.1668272964639845 1.1661116377452152 1.0 16.84387919853989 -6.525699394859545 22.510775777111558 1.1437269689539857 1.0634188404018732 0.17275932255163484 0.0642209009042928 34.80533523489881 277745.79788597574 0.02348718068734618 0.018335714406412924 2.98057877958031e-07 6.525699394859545 -0.08030812855211256 QLVAGNS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 QLVAGNSPK 9 0 Q96EU6-2;Q96EU6 Q96EU6-2 RRP36 Ribosomal RNA processing protein 36 homolog 1 QLVAGNS(1)PK;QLVAGNS(1)PK;QLVAGNS(1)PK;QLVAGNS(1)PK;QLVAGNS(1)PK;QLVAGNS(1)PK;QLVAGNS(1)PK;QLVAGNS(1)PK;QLVAGNS(1)PK 171.85 7.4708e-05 14249500000.0 23652700.0 20926300.0 18942000.0 17159810.0 18725300.0 19945700.0 19232600.0 20652300.0 23537300.0 19959400.0 True False 22340637.58051154 19920969.13698331 20163031.628271565 18790673.183115013 20198874.577617165 19821211.48781824 21176818.90008778 20580661.991583046 19263519.647047862 19782575.244178224 1.129308864228186 1.0069957470701805 1.0192318936941895 0.9498598110296527 1.0210437381534263 1.0019530441898048 1.0704783699139406 1.04034291479011 0.9737619803931687 1.0 24.237726908820743 -4.26022726884988 24.631654066004504 1.0110597563522141 1.1293089101288427 0.5661305743646263 0.03148469952287825 64.84809954886529 1317602.6561265255 0.0081333856354245 0.04846819344960099 5.492533711273125e-05 4.26022726884988 0.11824915377662859 QLVAGNS(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 2 QLVAGNSPKK 10 1 Q96EU6-2;Q96EU6 Q96EU6-2 RRP36 Ribosomal RNA processing protein 36 homolog 1 QLVAGNS(1)PKK;QLVAGNS(1)PKK 110.98 0.00043567 1842060000.0 2115740.0 2071470.0 2052670.0 1553880.0 1904710.0 1960630.0 1608350.0 1731530.0 2439480.0 1845320.0 True False 1998375.684576876 1971953.4718601422 2184988.392588124 1701560.2880089409 2054599.8406825608 1948392.9809112279 1770937.7139833493 1725523.7265721406 1996531.9262863758 1828971.900437238 1.0926224093979464 1.0781759257147268 1.1946538883761835 0.9303370312043406 1.1233632622739496 1.0652941034498349 0.9682695035172411 0.9434391671953152 1.0916143248614594 1.0 20.802601479615145 -5.895849934014825 0.7521417846908258 1.0009316209993673 1.1084448200505475 0.2048194116967037 0.07229193772007077 1.1171485685536695 1.397031852846146 0.0443181361972519 0.06573748702133182 1.27101321486477e-06 5.895849934014825 0.10751319905118017 QLVNNKDTTS(ph)FEDISPQGVSDDSSTGSR ddPTM_KYSE-520_SHP099_60min_R1 2 QLVNNKDTTSFEDISPQGVSDDSSTGSR 28 1 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y5D7;H0Y7U8;A0A2R8Y802 Q3V6T2 CCDC88A Girdin 1 QLVNNKDT(0.229)T(0.167)S(0.604)FEDISPQGVSDDSSTGSR;QLVNNKDT(0.058)T(0.24)S(0.702)FEDISPQGVSDDSSTGSR 141.9 1.2678e-06 1512840000.0 441540.0 456610.0 397730.0 353519.0 415510.0 399850.0 427271.0 457729.0 700410.0 381660.0 True False 417046.89601183194 434673.770214417 423368.31219049974 387117.33947063657 448208.2730714975 397354.3878331733 470463.722443112 456141.24493375124 573233.199899257 378278.7893269869 1.1024855418243755 1.1490831166816544 1.1191965400537887 1.0233651750852188 1.184862291298239 1.050427354227618 1.2436957495823002 1.2058335222688352 1.5153723023147094 1.0 18.529090358964034 -6.843014245836142 6.558147891834869 1.2607756944821016 1.107718126686079 0.2186726642976028 0.12418385581339837 0.2969357631460748 19.309039517630982 0.04939490607881347 0.03325793854549547 1.4354423468427565e-07 6.843014245836142 -0.15305756779602264 QLVYVEQAGSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 QLVYVEQAGSSPK 13 0 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 QLVYVEQAGSS(1)PK;QLVYVEQAGS(0.01)S(0.99)PK;QLVYVEQAGS(0.262)S(0.738)PK;QLVYVEQAGS(0.001)S(0.999)PK;QLVYVEQAGS(0.027)S(0.973)PK;QLVYVEQAGSS(1)PK 309.15 9.6441e-40 4284890000.0 6884830.0 7996940.0 6638500.0 6025620.0 6506690.0 7521030.0 6398640.0 7082250.0 8766930.0 6824080.0 True False 6502914.75533165 7612754.998748338 7066428.33197555 6598293.113131286 7018729.484998147 7474088.46198558 7045476.975908482 7057683.327759578 7175076.508320555 6763623.960253894 0.9614542135319336 1.125543797745753 1.044769545660887 0.975555878314027 1.0377172838471458 1.1050419872403752 1.0416718932499625 1.043476599118122 1.0608331495784717 1.0 22.689365021242725 -4.988526873631031 24.976525995318706 1.040043204717837 1.0539133858271919 0.0 0.0491106935728876 1488.9089762458757 3241251.5567539874 0.012725236112615971 0.026463386124921624 1.0267698943905591e-05 4.988526873631031 0.013870181109354895 QLWGLLIEETEKR ddPTM_KYSE-520_SHP099_60min_R1 2 QLWGLLIEETEKR 13 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ; 183.89 8.1327e-08 584590000.0 372970.0 262198.0 181728.0 243105.0 355370.0 253129.0 219091.0 211354.0 218542.0 177928.0 False True 352280.6106027378 249601.61451277827 193442.47765508047 266209.6261078168 383335.5972212891 251549.12801756477 241238.85640210527 210620.86230439437 178860.28179549627 176351.69634588927 1.997602619663995 1.4153627080695583 1.0969130530826878 1.509538221768413 2.1736995172954265 1.4264060580635767 1.3679417969926917 1.1943228597659243 1.014224901158233 1.0 17.428095927706117 -7.178029808293364 1.5955859625566433 1.019552897590382 1.5930588506363388 0.42316843727240405 0.28507298154013777 0.45849793441254977 2.1546268758747815 0.22953920935208807 0.095355885110396 6.636975152083331e-08 7.178029808293364 0.5735059530459568 QMDTVLS(ph)SSPDVLFDPINGLTPDEEALSNER ddPTM_KYSE-520_SHP099_60min_R1 1 QMDTVLSSSPDVLFDPINGLTPDEEALSNER 31 0 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 QMDT(0.01)VLS(0.372)S(0.328)S(0.29)PDVLFDPINGLTPDEEALSNER 56.983999999999995 0.059992 47172000.0 10414.0 10760.0 7282.8 8537.0 9860.9 11721.0 6298.0 10964.0 11281.0 8209.5 True False 9836.31466020568 10243.073448910729 7752.260940891997 9348.353913257353 10636.896729153881 11647.844891315806 6934.663302556738 10925.968443016833 9232.654770867808 8136.77021689435 1.2088721197733434 1.2588623220111426 0.9527442381002726 1.1489022872794659 1.30726276466165 1.4315071681797555 0.8522623986798004 1.3427893564366953 1.1346829915017236 1.0 12.990240534100908 -10.199596749638394 4.77704202777237 0.9999725898161281 1.182587866918605 0.09776526229151272 0.16584644234910517 4.7674840221858165e-05 7.987817803672253e-06 0.15812531829534304 0.03834526999955071 6.31543471975938e-11 10.199596749638394 0.18261527710247683 QMDTVLSS(ph)SPDVLFDPINGLTPDEEALSNER ddPTM_KYSE-520_SHP099_60min_R1 1 QMDTVLSSSPDVLFDPINGLTPDEEALSNER 31 0 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 QMDTVLS(0.087)S(0.51)S(0.402)PDVLFDPINGLTPDEEALSNER 102.91 0.00084384 52014000.0 26639.0 26882.0 31350.0 36340.0 24324.0 34226.0 17155.0 36277.0 38382.0 40671.0 True False 25161.28156647005 25590.54836929538 33370.87116177351 39793.742673980596 26238.160415371724 34012.38283850992 18889.194816665742 36151.163554115454 31412.79633148199 40310.6865815592 0.6241839001070376 0.6348328579697822 0.8278417956056242 0.9871760083636211 0.650898375602831 0.8437559794396916 0.4685902528216158 0.8968133916789551 0.7792672116344528 1.0 15.29887473528558 -8.182086689113833 1.4333948231012532 0.9968279061950649 0.7374627342969857 0.22940450930218326 0.1441272080048358 1.0908262509291793 4.385978219094688 0.13863320187904385 0.0409430495778404 6.5752657599280604e-09 8.182086689113833 -0.25936517189807917 QMDTVLSSS(ph)PDVLFDPINGLTPDEEALSNER ddPTM_KYSE-520_SHP099_60min_R1 7 QMDTVLSSSPDVLFDPINGLTPDEEALSNER 31 0 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 QMDT(0.001)VLS(0.111)S(0.086)S(0.802)PDVLFDPINGLTPDEEALSNER;QMDTVLS(0.001)S(0.003)S(0.996)PDVLFDPINGLTPDEEALSNER;QMDTVLS(0.102)S(0.084)S(0.814)PDVLFDPINGLTPDEEALSNER;QMDTVLS(0.001)S(0.011)S(0.988)PDVLFDPINGLTPDEEALSNER;QMDTVLS(0.001)S(0.01)S(0.99)PDVLFDPINGLTPDEEALSNER;QMDTVLS(0.001)S(0.024)S(0.975)PDVLFDPINGLTPDEEALSNER;QMDTVLSS(0.002)S(0.998)PDVLFDPINGLTPDEEALSNER 236.34 4.0331e-31 798317000.0 222541.2 283238.0 210630.0 165768.7 174001.9 264985.7 185591.9 244907.8 280246.4 243556.5 True False 210196.39601111607 269630.8213310942 224207.54681991567 181523.30740782287 187694.85959461727 263331.82595484547 204353.3404543951 244058.27200371036 229360.7181968378 241398.77889408995 0.8707434104434163 1.1169518858643053 0.9287849252886375 0.7519644806797613 0.7775302777192818 1.0908581524779721 0.8465384182579152 1.011017011443903 0.9501320563740977 1.0 17.881058852733986 -7.287818520564279 24.523774471764206 0.9854309004484403 0.9160078456181824 0.0850573675672025 0.11233363111202795 1928.9594213132132 1793274.4792982482 0.06459841715154699 0.0310478018698619 5.154439891153027e-08 7.287818520564279 -0.0694230548302579 QMEQISQFLQAAER ddPTM_KYSE-520_SHP099_60min_R1 1 QMEQISQFLQAAER 14 0 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 115.78 0.0010142999999999999 114320000.0 97110.0 98541.0 82136.0 77379.0 98748.0 82376.0 81614.0 87915.0 115900.0 92361.0 False True 91723.1147160144 93806.94244694349 87430.61798224649 84733.07689515525 106518.90580073687 81861.86082817434 89864.33959588206 87610.04338451524 94855.48160123923 91542.75339577065 1.0019702413741478 1.0247336787149495 0.9550796184188826 0.9256120637842862 1.163597355873918 0.8942473084052596 0.9816652467002798 0.9570396359583707 1.036187771096927 1.0 16.482158065093927 -4.718364920386434 24.998951580783658 0.9879444672865778 1.0133519649012512 0.01873727876848974 0.0695161174162346 752.5284115076269 436731.48165513406 0.017261503651910648 0.04566900786700462 1.9126481274531908e-05 4.718364920386434 0.025407497614673424 QMGPVT(ph)PT(ph)S(ph)RR ddPTM_KYSE-520_SHP099_60min_R1 3 QMGPVTPTSRR 11 1 M0R2L7 M0R2L7 ITPKC 3 QMGPVT(1)PT(1)S(1)RR;QMGPVT(1)PT(1)S(1)RR;QMGPVT(1)PT(1)S(1)RR 91.85799999999999 0.0037283999999999998 1031232000.0 0.0 1145.9 18484.8 15763.5 1155.5 3775.1 0.0 14119.7 11544.8 10397.400000000001 True False 0.0 1090.8492439690333 19676.35978472571 17261.658300530904 1246.4312761043425 3751.538200597758 0.0 14070.722056262759 9448.555340724646 10305.2871250548 0.0 0.10585335767277154 1.9093461003029626 1.6750293408675028 0.12095065969330908 0.3640401431879375 0.0 1.365388648129291 0.916864831233356 1.0 13.331097081236123 -7.302288797228153 24.98129384555216 1.1058449653031608 0.6423408062315359 0.10621686940301789 0.651793640972366 1492.9093645344165 912975.2571935329 0.39308062883381717 0.1888331982327077 4.985528494361138e-08 7.302288797228153 -0.4635041590716249 QMGYTEAIEVIQAAS(ph)SPVK ddPTM_KYSE-520_SHP099_60min_R1 3 QMGYTEAIEVIQAASSPVK 19 0 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 QMGYTEAIEVIQAAS(0.992)S(0.008)PVK;QMGYTEAIEVIQAAS(0.718)S(0.282)PVK;QMGYTEAIEVIQAAS(0.5)S(0.5)PVK 223.82 1.4267999999999998e-15 28411000.0 738410.0 792470.0 717700.0 637190.0 629860.0 814250.0 681940.0 826980.0 898740.0 877440.0 True False 697448.9253161581 754398.5516782791 763964.0903606022 697748.3460218401 679426.398586829 809167.9637192979 750877.150293036 824111.3993985829 735551.4713916979 869666.5642379912 0.8019727950875845 0.8674572332665096 0.8784563208199152 0.8023170887720775 0.7812493046483255 0.9304347171588657 0.863408093596148 0.9476176655367633 0.8457856167394384 1.0 19.730102842838853 -6.274767925319988 24.766985741471082 0.9107977555549998 0.8301438248998662 0.461921654171472 0.04884231176425101 717.7071944205323 1333633.2401138723 0.016767410684870847 0.014869294497421772 5.31168209664598e-07 6.274767925319988 -0.0806539306551336 QMGYTEAIEVIQAASS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 9 QMGYTEAIEVIQAASSPVK 19 0 P19838-3;P19838;P19838-2 P19838-3 NFKB1 Nuclear factor NF-kappa-B p105 subunit;Nuclear factor NF-kappa-B p50 subunit 1 QMGYTEAIEVIQAAS(0.028)S(0.972)PVK;QMGYTEAIEVIQAAS(0.082)S(0.918)PVK;QMGYTEAIEVIQAAS(0.052)S(0.948)PVK;QMGYTEAIEVIQAAS(0.214)S(0.786)PVK;QMGYTEAIEVIQAAS(0.25)S(0.75)PVK;QMGYTEAIEVIQAAS(0.002)S(0.998)PVK;QMGYTEAIEVIQAAS(0.016)S(0.984)PVK;QMGYTEAIEVIQAAS(0.007)S(0.993)PVK;QMGYTEAIEVIQAAS(0.025)S(0.975)PVK 310.75 2.6516999999999995e-53 1451712000.0 2516136.0 3230930.0 2335480.0 2021628.0 2031984.0 2813302.0 2122218.0 2777840.0 3272250.0 2918620.0 True False 2376560.920287237 3075711.273075201 2486028.777700123 2213762.9172953777 2191889.5803925623 2795743.138676612 2336752.506291736 2768204.3213927313 2678091.886709704 2892763.297451998 0.8215538832301136 1.0632433271620763 0.8593958516722973 0.765276204674369 0.7577148058823966 0.9664610793213385 0.8077925035726196 0.9569411793322389 0.9257901913608415 1.0 21.46401684780665 -7.291354391934948 22.54910908910721 0.9560243950367604 0.8667847834022554 0.20118688201801094 0.08897241138419242 416.88140050239963 314228.3473081888 0.050814559937065934 0.02442064190757339 5.1126446447804396e-08 7.291354391934948 -0.089239611634505 QMMS(ph)PVSK ddPTM_KYSE-520_SHP099_60min_R1 6 QMMSPVSK 8 0 Q8IY63;Q8IY63-2 Q8IY63 AMOTL1 Angiomotin-like protein 1 1 QMMS(0.997)PVS(0.003)K;QMMS(1)PVSK;QMMS(0.998)PVS(0.002)K;QMMS(0.951)PVS(0.049)K;QMMS(1)PVSK;QMMS(0.999)PVS(0.001)K 125.97 0.00086723 4583340000.0 5629680.0 5469430.0 4331650.0 3928620.0 4607240.0 6096280.0 5895050.0 6872800.0 8778300.0 6520510.0 True False 5317390.427911146 5206670.373018202 4610875.089885046 4301994.863617331 4969803.5763902785 6058230.855219761 6490979.184143706 6848959.860923579 7184382.002934924 6462743.35428001 0.8227760467061803 0.8056439947549577 0.7134547725512653 0.6656607926057122 0.7689928725235518 0.9374085466673596 1.004369016115269 1.0597604585965483 1.1116613501566641 1.0 22.623715270384675 -6.473752701263488 2.0133675307188788 1.054740630222572 0.7479700279208515 0.8829231797080339 0.049954162708297854 0.1138932837763374 0.9206624391166505 0.024275189857899497 0.019238407175244793 3.3592884653986615e-07 6.473752701263488 -0.3067706023017204 QMNMS(ph)PPPGNAGPVIMSIEEK ddPTM_KYSE-520_SHP099_60min_R1 3 QMNMSPPPGNAGPVIMSIEEK 21 0 B4DEH8;G3V4T2;Q92843-2;Q86U42-2;Q86U42 B4DEH8 PABPN1 Polyadenylate-binding protein 2 1 QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK;QMNMS(1)PPPGNAGPVIMSIEEK 169.91 2.211e-09 1066470000.0 800475.0 939800.0 627945.0 625851.0 623820.0 914656.0 696114.0 886717.0 969060.0 915613.0 True False 756071.0560426485 894650.5973314404 668423.3394475235 685331.6908710359 672911.0849497274 908947.2926295832 766483.996537945 883641.1856883038 793103.1320146396 907501.3811561337 0.8331348819320067 0.9858393782185524 0.7365535230326251 0.7551852868785067 0.7414986896135142 1.0015932884549523 0.8446091790642388 0.9737078136041704 0.8739415151128985 1.0 19.7915403132318 -6.261780824219003 24.99999935967526 0.9312420228861927 0.8130118600084797 0.37932633214277234 0.08176008892162864 39.03211406610631 2857779.494033345 0.028999899358849328 0.027187451857080585 5.472920955968662e-07 6.261780824219003 -0.11823016287771304 QMPSESLDPAFS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 QMPSESLDPAFSPR 14 0 Q15018 Q15018 FAM175B BRISC complex subunit Abro1 1 QMPS(0.003)ES(0.007)LDPAFS(0.99)PR;QMPSESLDPAFS(1)PR 137.17 6.9275e-06 1014950000.0 841650.0 886210.0 734900.0 637420.0 698940.0 875300.0 760730.0 950620.0 1039220.0 870460.0 True False 794961.9967123214 843635.14137167 782272.8298815738 698000.2051526883 753942.601575394 869836.9280239505 837632.0124093348 947322.5210963758 850523.8446043113 862748.4016076326 0.9214296951822813 0.9778460786477873 0.9067218535831514 0.80904259440185 0.8738846692390372 1.0082162150669989 0.9708879330851308 1.0980287176784669 0.9858306813660364 1.0 19.71858037025509 -6.276453578077038 15.954877767748048 1.0161150810717847 0.897799296531326 0.5633804796240727 0.05048735432498047 5.857174434332608 6222.689348979646 0.01921260936209045 0.017158007312909788 5.29110551040151e-07 6.276453578077038 -0.11831578454045877 QMVEHGGFYR ddPTM_KYSE-520_SHP099_60min_R1 1 QMVEHGGFYR 10 0 Q14204;A0A2R8Y706;A0A2R8Y6H2;A0A2R8YFZ7;A0A2R8YGC7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 113.69 0.0010595999999999997 284420000.0 298520.0 285870.0 155950.0 165910.0 228500.0 253010.0 186240.0 196780.0 202430.0 201740.0 False True 281960.5005151333 272136.3761003817 166002.78652882238 181678.03651733982 246481.6500128445 251430.87074070596 205066.95672724154 196097.41610879713 165673.81484502886 199952.74055134496 1.4101357137574713 1.361003481872763 0.8302101090042088 0.9086048834158766 1.2326995335657907 1.2574514860232293 1.0255771246835366 0.980718821697981 0.8285648618178665 1.0 17.609299529291977 -4.675792849727402 7.780104645400949 1.0216887698951678 1.3936505228721894 0.5446191927002217 0.13777650496157948 0.19869284686902097 15.537940309323208 0.03881965729036286 0.1034687711975942 2.1096341656765395e-05 4.675792849727402 0.3719617529770216 QMVIDVLHPGK ddPTM_KYSE-520_SHP099_60min_R1 1 QMVIDVLHPGK 11 0 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4 E7ETK0 RPS24 40S ribosomal protein S24 0 93.01100000000001 0.004379600000000001 546530000.0 407650.0 373480.0 278570.0 237860.0 400900.0 407950.0 286740.0 363800.0 304280.0 316460.0 False True 385036.84186987195 355537.4601950906 296527.06792775955 260466.14288478333 432448.5491910257 405403.8327286314 315726.477512721 362538.0627115587 249030.42227459044 313656.4106021546 1.2275752347311564 1.1335252466625285 0.945388195186222 0.8304186813358697 1.378733335501784 1.2925093160070948 1.0065997914934761 1.1558445817050624 0.7939592938543937 1.0 18.258825523613197 -7.75103318790519 24.965827909181385 0.8969796286963869 1.1166319419389543 0.2372453354335724 0.16072877598463853 282.4941131025745 677752.0009114312 0.11779278228505084 0.04344697138453218 1.7740539061016672e-08 7.75103318790519 0.2196523132425674 QNEEFRPFIR ddPTM_KYSE-520_SHP099_60min_R1 1 QNEEFRPFIR 10 1 Q5T092;A0A0A0MR06;Q5T091;O15258 Q5T092 RER1 Protein RER1 0 120.04 0.00057346 197100000.0 174910.0 180280.0 114040.0 132920.0 190220.0 165360.0 146150.0 143320.0 162010.0 137180.0 False True 165207.3936255595 171619.07819420297 121391.20087045149 145552.67683614476 205189.23179625112 164327.9269028226 160924.26828654602 142822.85637113955 132593.06793974756 135964.6919244249 1.2150757030169932 1.2622326853033017 0.8928141501466131 1.0705181968642954 1.509136150658174 1.2086073566375837 1.1835739559208118 1.0504407750986315 0.9752022092136138 1.0 17.05287252739038 -7.371170499531302 2.9147230716062444 0.9910532882806121 1.1921807269016738 0.2566951103141206 0.14530437240614444 0.4362636432663283 7.005181633724432 0.10631169542015832 0.04334241307797773 4.2543136038302767e-08 7.371170499531302 0.20112743862106164 QNGSNDS(ph)DRYS(ph)DNEEDSKIELK ddPTM_KYSE-520_SHP099_60min_R1 1 QNGSNDSDRYSDNEEDSKIELK 22 2 G5E972;P42167;H0YJH7;P42167-2;P42167-3 G5E972 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 2 QNGS(0.009)NDS(0.989)DRY(0.006)S(0.931)DNEEDS(0.064)KIELK 107.31 0.00038652 333870000.0 407480.0 488020.0 372110.0 533530.0 466650.0 426130.0 559220.0 487210.0 665990.0 363030.0 True False 384876.2721087584 464574.78666704573 396096.8059970513 584236.5307883557 503372.7001247004 423470.36460510263 615751.4150612544 485519.98222566885 545063.0042416672 359813.83663306636 1.0696538957762494 1.2911532002612043 1.1008381714930708 1.623718910465783 1.3989809420198411 1.1769151752686833 1.7113055485111597 1.3493644012383994 1.514847259188411 1.0 18.456891140898588 -5.238749754557757 24.97318142876194 1.4150817988828817 1.1676088791901804 0.2297744014103943 0.20103285933757167 1109.7200649984159 1221404.0962901718 0.05147886868212198 0.08908244341963234 5.770988985852358e-06 5.238749754557757 -0.24747291969270124 QNGSNDSDRYS(ph)DNEEDSKIELK ddPTM_KYSE-520_SHP099_60min_R1 1 QNGSNDSDRYSDNEEDSKIELK 22 2 G5E972;P42167;H0YJH7;P42167-2;P42167-3 G5E972 TMPO Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 QNGS(0.003)NDS(0.038)DRY(0.432)S(0.526)DNEEDS(0.001)KIELK 51.333 0.055275 1048600000.0 140140.0 162400.0 122530.0 157440.0 143230.0 113310.0 161510.0 186100.0 199420.0 139600.0 True False 132366.15483783602 154598.0602326304 130428.47985493163 172403.05026393788 154501.38613277773 112602.7902597897 177837.00698570005 185454.46253606677 163210.35496910385 138363.2526071565 0.9566568604284871 1.1173346775214086 0.9426526002915426 1.2460176167831774 1.1166359797239005 0.813820057985292 1.2852907374952955 1.3403447739307814 1.1795787674383003 1.0 17.07810130815664 -6.826969998614412 24.999999999999908 1.2296661977190968 1.045534830836654 0.24988484567467784 0.1389891510800579 76.81070688783912 29302.075315898303 0.05714597816101283 0.03852782098233442 1.489463967434902e-07 6.826969998614412 -0.1841313668824427 QNGSNDSDRYS(ph)DNEEGK ddPTM_KYSE-520_SHP099_60min_R1 16 QNGSNDSDRYSDNEEGK 17 1 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 QNGSNDS(0.001)DRY(0.182)S(0.817)DNEEGK;QNGSNDS(0.213)DRY(0.015)S(0.772)DNEEGK;QNGSNDS(0.006)DRY(0.199)S(0.794)DNEEGK;QNGSNDS(0.004)DRY(0.064)S(0.932)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDS(0.003)DRYS(0.997)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDSDRYS(1)DNEEGK;QNGSNDSDRYS(1)DNEEGK 282.05 1.4016e-37 21855580000.0 14067414.0 12044311.0 12216337.0 12480399.0 12661259.0 12415462.0 13333836.0 13168748.0 14311344.0 13052174.0 True False 13287066.502725422 11465684.22068062 13003821.62985031 13666532.368591225 13657628.050590733 12337972.496376209 14681750.26857891 13123068.686796902 11712764.689223504 12936541.892797718 1.027095696271262 0.8863020980177104 1.005200751298927 1.0564285635096904 1.055740256072179 0.9537303398866774 1.1349053240227065 1.0144185977632114 0.9054015196862201 1.0 23.62494868178431 -4.980929435936967 24.86449340084393 1.022396069918076 0.9539619867056452 0.11151299261712433 0.06619872273403204 414.1037015560084 539907.1992680926 0.016990108404079784 0.03536137792715685 1.0448899789017933e-05 4.980929435936967 -0.06843408321243083 QNGSNDSDRYS(ph)DNEEGKK ddPTM_KYSE-520_SHP099_60min_R1 3 QNGSNDSDRYSDNEEGKK 18 2 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 QNGSNDSDRYS(1)DNEEGKK;QNGSNDSDRYS(1)DNEEGKK;QNGSNDSDRYS(1)DNEEGKK 208.46 2.7419e-18 2960320000.0 1948310.0 1721410.0 1596230.0 1621500.0 1720040.0 1614990.0 1797310.0 1730090.0 1962080.0 1496890.0 True False 1840233.3604403066 1638710.8797109132 1699125.5398582998 1775606.8724782497 1855397.3623111327 1604910.2483598755 1978999.6348552317 1724088.72159604 1605815.7320117303 1483628.7191627994 1.2403597589285926 1.1045289556241709 1.14524983098002 1.196800014413452 1.2505806461862774 1.0817465499491776 1.3338914307158778 1.1620755916405625 1.082356866829782 1.0 20.500698669342125 -7.912727410867971 2.73896000056798 1.0032038258613736 1.1893450726596764 0.4447933701788517 0.06962222318996933 0.2228520464672775 3.4779793094528313 0.06497238164537665 0.017672249563849614 1.2225667752571447e-08 7.912727410867971 0.1861412467983028 QNGSNDSDRYS(ph)DNEEGKKK ddPTM_KYSE-520_SHP099_60min_R1 6 QNGSNDSDRYSDNEEGKKK 19 3 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 QNGS(0.001)NDS(0.007)DRYS(0.992)DNEEGKKK;QNGSNDS(0.037)DRYS(0.963)DNEEGKKK;QNGSNDS(0.003)DRYS(0.997)DNEEGKKK;QNGSNDSDRYS(1)DNEEGKKK;QNGSNDSDRYS(1)DNEEGKKK;QNGSNDSDRYS(1)DNEEGKKK 251.51 4.2545e-24 7708245000.0 3015670.0 2923140.0 3159930.0 2306836.0 2529760.0 2347465.0 2206067.0 2204674.0 3701360.0 2006564.0 True False 2848384.7735108966 2782707.966677408 3363624.1438667653 2526076.9998644637 2728837.7196345474 2332813.6001870697 2429077.7814991144 2197026.500468778 3029286.3276925157 1988787.404043169 1.4322218492133356 1.3991983059728823 1.6912939698977265 1.2701593919636631 1.372111324763456 1.1729828917080336 1.2213863465551134 1.104706564413201 1.523182579261127 1.0 20.923457633567555 -5.677966107845457 1.8340034092142088 1.219900690395755 1.4904789539645833 0.37369528178056377 0.1549358650271977 0.36910987694342795 2.552534380937623 0.05089854422841009 0.07166400803343743 2.0991036903807434e-06 5.677966107845457 0.2705782635688283 QNIS(ph)PDKIPWSALK ddPTM_KYSE-520_SHP099_60min_R1 1 QNISPDKIPWSALK 14 1 Q14204;A0A2R8Y706;A0A2R8Y5T0;A0A2R8Y542;A0A2R8Y6I5 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 QNIS(1)PDKIPWSALK 81.157 0.007054 0.0 606860.0 472010.0 490490.0 416160.0 537720.0 531820.0 482620.0 526840.0 540160.0 505260.0 True False 573196.2660545828 449333.9310985463 522107.7702117484 455711.7212769331 580035.5047917144 528500.7141113882 531407.9395172969 525012.5150053804 442080.5603254991 500783.7894863324 1.1445982839071644 0.8972613341966208 1.0425812120382103 0.9099969504691218 1.158255352847329 1.0553470883182656 1.0611524387847628 1.0483816090450933 0.8827772975218571 1.0 18.933828337014464 -7.742844541069151 24.925972776300913 0.9413886267322306 1.0359105876024257 0.17994983923095764 0.0836329251372394 348.12075096216324 466651.95222750836 0.05496320712127138 0.020692108419044328 1.8078211331862833e-08 7.742844541069151 0.09452196087019515 QNIVLPSDEKGELDLS(ph)LENLDLSK ddPTM_KYSE-520_SHP099_60min_R1 1 QNIVLPSDEKGELDLSLENLDLSK 24 1 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 QNIVLPS(0.006)DEKGELDLS(0.983)LENLDLS(0.011)K 49.623000000000005 0.059026999999999996 0.0 84008.0 116810.0 78099.0 52404.0 71600.0 83600.0 52543.0 76014.0 136890.0 88596.0 True False 79347.9087742039 111198.2722646154 83133.38650281829 57384.4604041629 77234.5126517273 83078.22139015463 57854.55921026335 75750.32517580097 112034.22671607963 87811.10836664491 0.9036203989465214 1.2663349128941654 0.9467297253065597 0.6534988735657551 0.8795528730743691 0.9461015005444565 0.6588523967685099 0.862650826129132 1.2758548297590546 1.0 16.422115836072734 -4.98755820885602 24.74540634031094 0.8760353829479747 1.09036643260052 0.13214364703502435 0.18516304461172875 334.328073692593 664932.156302481 0.047953125251314926 0.0997167801125359 1.0290625918229695e-05 4.98755820885602 0.21433104965254535 QNLFQEAEEFLYR ddPTM_KYSE-520_SHP099_60min_R1 2 QNLFQEAEEFLYR 13 0 A0A087X1Z3;Q9UL46 A0A087X1Z3 PSME2 Proteasome activator complex subunit 2 0 ; 127.37 0.00042952 21469000.0 55237.0 61708.0 43610.0 48014.0 56008.0 56734.0 51188.0 46631.0 51973.0 42709.7 False True 52172.89349777041 58743.455054403625 46421.170378467075 52577.236124064526 60415.51095807183 56379.902061591245 56362.582586737764 46469.24794475724 42536.013332711016 42331.32528564378 1.2324890171927665 1.3877064953202833 1.0966150968632753 1.2420408708984014 1.4272057524870618 1.3318718863902872 1.331462745529787 1.0977508412786876 1.0048353800804968 1.0 15.369438036008667 -7.423160926001761 3.4217799225236933 1.0102538263833658 1.2934040537618434 0.6572957956943128 0.08708142408842798 0.16284214965993019 3.511587020099235 0.060575722374356315 0.024812031854573438 3.774323090489878e-08 7.423160926001761 0.2831502273784776 QNLWFANPGGSNS(ph)MPSQSR ddPTM_KYSE-520_SHP099_60min_R1 1 QNLWFANPGGSNSMPSQSR 19 0 M0QZ22;Q5PRF9;M0QX45 M0QZ22 SAMD4B Protein Smaug homolog 2 1 QNLWFANPGGS(0.282)NS(0.717)MPS(0.001)QS(0.001)R 118.46 3.4096999999999996e-05 135750000.0 142130.0 174730.0 141520.0 191420.0 136870.0 130340.0 122100.0 128580.0 148850.0 134440.0 True False 134245.76557086947 166335.7085249231 150642.6056400059 209612.49924747855 147640.89031622786 129526.49971283185 134443.059581165 128133.98599079758 121822.59220314445 133248.96619273725 1.007480728793726 1.248307685061719 1.130534892271582 1.5730891220895904 1.1080077732286004 0.9720638246864816 1.0089613707524046 0.9616133592020434 0.9142479351542196 1.0 17.023764814367627 -5.99881865934232 24.99997284688601 0.9789614064537019 1.246136043904749 0.4663340058783503 0.13531518838313497 36.407397537192544 770434.3252330294 0.042512755088611846 0.047831737593350084 1.0027238403185581e-06 5.99881865934232 0.2671746374510472 QNNT(ph)FPFFSEGITR ddPTM_KYSE-520_SHP099_60min_R1 3 QNNTFPFFSEGITR 14 0 Q9BYX2-2;Q9BYX2;Q9BYX2-3;Q9BYX2-4 Q9BYX2-2 TBC1D2 TBC1 domain family member 2A 1 QNNT(1)FPFFSEGITR;QNNT(1)FPFFSEGITR;QNNT(1)FPFFSEGITR 236.69 1.1500999999999999e-17 345802000.0 847290.0 844050.0 771980.0 696790.0 710070.0 800060.0 743620.0 800440.0 915270.0 923390.0 True False 800289.1346692594 803500.5710551207 821743.0660116728 763012.7121024476 765948.4692543565 795066.5287728109 818792.3666318269 797663.4604641 749080.0400790878 915209.4829865504 0.8744327386749993 0.8779417018638219 0.8978742913918746 0.8337028038789023 0.8369105472496645 0.8687262791228038 0.8946502214552113 0.871563806202194 0.8184793252301736 1.0 19.803742475183785 -10.370428999297829 5.533598778371444 1.0000443698014343 0.86482984695216 0.7289828783656875 0.024905030964850666 1.4252157864456049e-05 1.6215194067856402e-06 0.025209789821813117 0.006112267760967018 4.261583484531522e-11 10.370428999297829 -0.13521452284927427 QNPEQS(ph)ADEDAEK ddPTM_KYSE-520_SHP099_60min_R1 4 QNPEQSADEDAEK 13 0 Q99613-2;Q99613;B5ME19;H3BPE3 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QNPEQS(1)ADEDAEK;QNPEQS(1)ADEDAEK;QNPEQS(1)ADEDAEK;QNPEQS(1)ADEDAEK 265.56 3.5111999999999997e-22 1482396000.0 2667488.0 2229178.0 1912717.0 2102386.0 2206210.0 2434709.0 2683345.0 2608780.0 2636956.0 2330786.0 True False 2519517.1231345073 2122084.9428156056 2036013.7982754034 2302196.1333345976 2379826.1753822253 2419513.0780215506 2954603.6995235137 2599730.7510738303 2158151.2626512256 2310137.0493640676 1.0906353472959873 0.9185969912043838 0.8813389659439795 0.9965625779510977 1.030166663071934 1.047346121169561 1.2789733407101775 1.1253578015163568 0.9342091904224121 1.0 21.139547011689697 -5.994957314211154 2.068338219938321 1.0974103233410673 0.9600375880665731 0.1919691804135909 0.09878231690101265 0.45569433157040196 3.926019495876646 0.037327230822414965 0.04105249421652988 1.0116788849247769e-06 5.994957314211154 -0.13737273527449412 QNPHHVHEWHK ddPTM_KYSE-520_SHP099_60min_R1 4 QNPHHVHEWHK 11 0 Q9HCS7 Q9HCS7 XAB2 Pre-mRNA-splicing factor SYF1 0 ;;; 172.17 6.1240999999999995e-06 3023467000.0 737354.0 778619.0 553966.0 770281.0 479567.0 676741.0 719278.0 717744.0 736059.0 325815.0 False True 696451.5037412432 741212.9745090536 589675.5347369391 843488.2746465728 517306.19453702384 672517.2083946716 791989.6397167996 715254.3135867082 602409.2401374162 322928.5325802341 2.1566737945901524 2.295284868719036 1.8260248793297 2.6119967409104725 1.6019216091055537 2.082557409904866 2.4525229572893923 2.2148997113130524 1.8654568406331296 1.0 18.300855391367104 -8.143893761292857 3.2352314122601054 1.0003609490605327 2.151342983365363 0.6195054166037424 0.2723719370440854 0.4134719990562941 7.85075132852287 0.25459016744977686 0.06759783544781281 7.179699022188577e-09 8.143893761292857 1.1509820343048303 QNRPIPQWIR ddPTM_KYSE-520_SHP099_60min_R1 2 QNRPIPQWIR 10 1 Q59GN2;P62891 Q59GN2 RPL39P5;RPL39 Putative 60S ribosomal protein L39-like 5;60S ribosomal protein L39 0 ; 160.16 8.4849e-05 1729200000.0 1293910.0 1173990.0 854610.0 723290.0 1326660.0 1136090.0 850520.0 955220.0 987800.0 967010.0 False True 1222134.2329543633 1117589.7582050841 909699.5280243462 792031.2641349322 1431060.5943371567 1128999.240898813 936498.861875288 951906.5647700246 808440.4204115962 958443.0437223959 1.2751245271788347 1.166047127708909 0.9491430231380887 0.8263728025599157 1.4931096883746073 1.177951312071724 0.9771043443939232 0.9931801070546822 0.8434934404362513 1.0 19.870333175520926 -6.834584222078822 5.5131565173785555 0.9488204457977677 1.14058895206341 0.2349719265713155 0.17199291907907363 0.3567588286924411 19.207220107970333 0.0780936883194291 0.052588908785001054 1.4635776805986185e-07 6.834584222078822 0.19176850626564235 QNS(ph)DPTSEGPGPSPNPPAWVRPDNEAPPKVPQR ddPTM_KYSE-520_SHP099_60min_R1 3 QNSDPTSEGPGPSPNPPAWVRPDNEAPPKVPQR 33 2 Q8N4C8;Q8N4C8-4 Q8N4C8 MINK1 Misshapen-like kinase 1 1 QNS(0.988)DPT(0.012)SEGPGPSPNPPAWVRPDNEAPPKVPQR;QNS(1)DPTSEGPGPSPNPPAWVRPDNEAPPKVPQR;QNS(0.775)DPT(0.218)S(0.008)EGPGPSPNPPAWVRPDNEAPPKVPQR 244.62 2.0015999999999996e-31 2947310000.0 802580.0 865600.0 944080.0 764670.0 674280.0 761900.0 656070.0 722340.0 1078970.0 757990.0 True False 758059.2874964357 824015.2767079119 1004936.9073814091 837344.0068935815 727341.9998716007 757144.6994875447 722391.9582261663 719834.3711354235 883056.2466202687 751274.7983072968 1.0090306359329835 1.0968227319277941 1.3376422444166107 1.114564216422816 0.9681437491452937 1.0078132544755574 0.9615548929017629 0.9581505632257172 1.1754104471624627 1.0 19.518981181963788 -5.628430936944633 5.6330805460705005 1.0077475861495193 1.1555022138994724 0.2986177250211328 0.0962477425570233 0.2507581015528736 11.606507298585408 0.029475821934275427 0.038229154153611666 2.3527136005388037e-06 5.628430936944633 0.14775462774995307 QNS(ph)PAGNKENIKPNETS(ph)PSFSK ddPTM_KYSE-520_SHP099_60min_R1 3 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 2 QNS(1)PAGNKENIKPNET(0.04)S(0.959)PS(0.001)FSK;QNS(1)PAGNKENIKPNET(0.214)S(0.782)PS(0.004)FSK;QNS(0.991)PAGNKENIKPNET(0.194)S(0.782)PS(0.031)FS(0.002)K 250.43 1.8969999999999996e-27 4887420000.0 3508740.0 3240750.0 3461590.0 2982550.0 3118720.0 3058530.0 2918760.0 3216410.0 3825180.0 2643320.0 True False 3314103.197700218 3085059.50553508 3684729.6301398263 3266010.655263642 3364145.520910547 3039440.5797659038 3213816.7451525126 3205253.0244257357 3130623.7369407066 2619902.2412718395 1.264972083878739 1.1775475653005392 1.4064378327151104 1.2466154667199136 1.2840729199412466 1.1601351118698224 1.2266933836402825 1.2234246659790389 1.1949391422410234 1.0 21.32108154953591 -10.176151209565667 0.25971867959335326 0.8265902898938441 1.2860355828170222 0.6215553351571876 0.06028840252022788 11.61016086764136 0.6637734935220276 1.4906638977727236 0.09371672009037554 6.665746455844204e-11 10.176151209565667 0.45944529292317815 QNS(ph)PVTQDGIQESPWQDR ddPTM_KYSE-520_SHP099_60min_R1 1 QNSPVTQDGIQESPWQDR 18 0 O75815 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 QNS(0.999)PVT(0.001)QDGIQESPWQDR 287.31 7.995e-38 538930000.0 141110.0 155790.0 165820.0 125230.0 130660.0 150990.0 192070.0 215890.0 246020.0 194280.0 True False 133282.34700418898 148305.61455444244 176509.0225213806 137131.82154822748 140942.1986462944 150047.61540310332 211486.3100225584 215141.12797910502 201348.9696595072 192558.8303475526 0.692164294743718 0.7701833994668704 0.9166498477519652 0.7121554555598203 0.7319435748124637 0.7792299897765266 1.0982945297332938 1.1172747964390584 1.0456491104359593 1.0 17.554939758083346 -6.757662297203657 24.615556012789902 1.0750775461217872 0.7699050371042789 0.837751217546339 0.06423635606236579 30.382673825686805 198008.35747405735 0.025993384108623112 0.01934429800120529 1.747180213702482e-07 6.757662297203657 -0.30517250901750825 QNS(ph)SSSDSGGSIVR ddPTM_KYSE-520_SHP099_60min_R1 1 QNSSSSDSGGSIVR 14 0 A0A2R8Y4W2;A0A2R8YE63;Q12929-2;Q12929 A0A2R8Y4W2 EPS8 Epidermal growth factor receptor kinase substrate 8 1 QNS(0.296)S(0.296)S(0.296)S(0.109)DS(0.003)GGSIVR 124.69 0.00093214 0.0 228310.0 225730.0 213790.0 224100.0 219560.0 223570.0 253930.0 293280.0 306840.0 259370.0 True False 215645.18917529855 214885.59197236257 227571.2454760944 245398.396621878 236838.1228744869 222174.6167009191 279599.7225179794 292262.68013206695 251125.59080693894 257072.18358680667 0.8388507312090447 0.8358959299841993 0.8852425894583396 0.9545894588747416 0.9212903534330183 0.8642499301208777 1.0876311805379197 1.1368895539543171 0.9768680037766135 1.0 17.9718139866992 -6.760670747821597 24.999945295164885 1.0617546684966068 0.8862443186045916 0.6995556891481801 0.05338482905236148 11.55832146553055 375957.67783228384 0.02216177927005053 0.01614153679548924 1.7351189469754062e-07 6.760670747821597 -0.1755103498920152 QNS(ph)TGQAQIR ddPTM_KYSE-520_SHP099_60min_R1 1 QNSTGQAQIR 10 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 QNS(0.944)T(0.056)GQAQIR 102.97 0.0024583 248670000.0 543070.0 514160.0 517360.0 400220.0 453810.0 478760.0 473700.0 520660.0 649770.0 563830.0 True False 512944.8245167941 489458.98183010623 550709.8534052672 438256.78846946906 489522.26517430716 475771.8812529957 521586.218866486 518853.95198295737 531788.1473687423 558834.9048531029 0.9178825804584064 0.8758561385115466 0.9854607302133866 0.7842330260037544 0.8759693800854915 0.8513639307803413 0.9333458134716761 0.928456593310586 0.9516015244404424 1.0 19.09206260879512 -7.657328198944861 1.085419285595667 0.9947786330643498 0.883487736429569 0.3623696831440363 0.049256616345312386 0.5337094456090035 1.2326877792197486 0.046288858823026906 0.015894760486540784 2.2012623271901562e-08 7.657328198944861 -0.11129089663478076 QNSPAGNKENIKPNET(ph)SPSFSK ddPTM_KYSE-520_SHP099_60min_R1 1 QNSPAGNKENIKPNETSPSFSK 22 2 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 QNSPAGNKENIKPNET(0.458)S(0.458)PS(0.08)FS(0.003)K 81.839 0.00040809 0.0 241710.0 264050.0 226260.0 196890.0 220260.0 192600.0 182180.0 194680.0 271040.0 191830.0 True False 228301.8644630609 251364.64165286996 240845.0816287998 215602.36640286274 237593.20889203125 191397.91195865773 200596.53230545996 194004.70051865335 221825.96836238008 190130.5354414819 1.2007638012113384 1.3220635026835794 1.2667354092784677 1.1339702268351342 1.2496320401157097 1.006665823110596 1.0550463755844168 1.0203763433799609 1.1667035378999044 1.0 17.536630725477828 -6.255579522555646 24.958543309981398 1.0513624331409515 1.2356813452100295 0.686023542153576 0.06252872314221204 281.87075830751826 1200557.499429168 0.021174120222260836 0.020624743520725596 5.551629533387704e-07 6.255579522555646 0.18431891206907802 QNVAYEYLCHLEEAKR ddPTM_KYSE-520_SHP099_60min_R1 2 QNVAYEYLCHLEEAKR 16 1 P46940;A0A0J9YXZ5;A0A087X225 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 0 ; 196.66 4.7433e-12 899720000.0 999470.0 708850.0 592600.0 591390.0 910190.0 743350.0 594620.0 635260.0 684280.0 480890.0 False True 944027.4067059513 674795.7819944584 630799.9441935237 647595.5277921137 981816.7747273131 738710.4769183187 654729.992531961 633056.4313307984 560032.0012950466 476629.6887267591 1.9806307266082634 1.4157653162501662 1.32345919507995 1.3586974187908076 2.059915271644285 1.549862491553279 1.373665988539171 1.328193451444262 1.174983461040968 1.0 18.862509292613897 -7.500228646633454 1.1336027247876892 1.0272293202790865 1.595266363057779 0.4459371837536894 0.23390154265760485 0.5017634588363352 1.1665388513653847 0.22524193104990853 0.07952558427866482 3.1606132276898936e-08 7.500228646633454 0.5680370427786925 QNVGTLESFS(ph)PGDFR ddPTM_KYSE-520_SHP099_60min_R1 2 QNVGTLESFSPGDFR 15 0 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9 Q6ULP2-7 AFTPH Aftiphilin 1 QNVGTLESFS(1)PGDFR;QNVGTLESFS(1)PGDFR 282.2 9.223799999999998e-29 0.0 340080.0 323070.0 294010.0 275590.0 287900.0 290710.0 307400.0 305320.0 395490.0 326890.0 True False 321215.08446732716 307549.2322620432 312962.35503263277 301781.9907408452 310556.09207307687 288895.5710566006 338474.99193489086 304260.91618222377 323678.9854915795 323994.0089165718 0.9914229140886361 0.9492435779614583 0.9659510559444336 0.931443120661388 0.9585241810846102 0.891669484947146 1.0446952184910552 0.9390942665874131 0.9990276874993902 1.0 18.305607610428613 -6.763839854213507 24.999997159247833 0.9906287995982768 0.9486329565593237 0.3172511888858489 0.033921660366210166 87.93287645557014 915761.483712225 0.013225549969228421 0.009397750422672886 1.7225036298997356e-07 6.763839854213507 -0.041995843038953096 QPAQELS(ph)PTPGGTAHQALK ddPTM_KYSE-520_SHP099_60min_R1 1 QPAQELSPTPGGTAHQALK 19 0 I3L2J8;Q9UPN4-3;Q9UPN4-2;Q9UPN4 I3L2J8 CEP131 Centrosomal protein of 131 kDa 1 QPAQELS(0.995)PT(0.005)PGGTAHQALK 213.01 3.4365e-15 0.0 162400.0 166600.0 132460.0 119040.0 113580.0 158030.0 124020.0 146540.0 176750.0 143250.0 True False 153391.34826362625 158596.28592830192 140998.58354349356 130353.52580931886 122518.09981820101 157043.67615174802 136557.15191855928 146031.6869426931 144656.65550490966 141980.91644681364 1.0803659541181154 1.1170253714182246 0.9930812328311174 0.9181059615018725 0.8629194886490013 1.1060900301385004 0.9617993413200279 1.0285303870213915 1.0188457655089045 1.0 17.115337505591256 -4.790285515487585 8.062601737997332 0.9835735656413443 1.0987237005778236 0.3435878971777808 0.06214232064173272 0.20803886819898448 49.320252610250876 0.016935265455355335 0.036467890125924995 1.620744231356233e-05 4.790285515487585 0.1151501349364793 QPAQSQNLS(ph)PLSGFSR ddPTM_KYSE-520_SHP099_60min_R1 4 QPAQSQNLSPLSGFSR 16 0 Q9P2M7-2;Q9P2M7;A6PVU7 Q9P2M7-2 CGN Cingulin 1 QPAQSQNLS(0.958)PLS(0.035)GFS(0.007)R;QPAQSQNLS(1)PLSGFSR;QPAQSQNLS(1)PLSGFSR;QPAQSQNLS(1)PLSGFSR 324.45 1.4964e-47 4078620000.0 1485220.0 1452030.0 1007360.0 824180.0 980120.0 1305200.0 984420.0 1316530.0 1561140.0 1265880.0 True False 1402831.885887334 1382272.2992585355 1072296.037432988 902509.8194012473 1057249.8678800412 1297053.762660642 1083934.7806133546 1311963.2647104107 1277676.3291368305 1254665.2880397376 1.1180925297447963 1.1017060186770358 0.8546470900683962 0.7193231756744538 0.8426549119979767 1.0337846874580638 0.8639234630511468 1.0456679380683227 1.0183403823445574 1.0 20.25887111143621 -8.882639557162378 11.785744415711441 1.0000000001119898 0.9487096434123018 0.009023631826056033 0.12389018718641771 0.0 0.0 0.13139587726243135 0.031868181219041086 1.3102689299539009e-09 8.882639557162378 -0.051290356699687956 QPCT(ph)PPPQLQQQQVK ddPTM_KYSE-520_SHP099_60min_R1 4 QPCTPPPQLQQQQVK 15 0 P22528 P22528 SPRR1B Cornifin-B 1 QPCT(1)PPPQLQQQQVK;QPCT(1)PPPQLQQQQVK;QPCT(1)PPPQLQQQQVK;QPCT(1)PPPQLQQQQVK 191.44 2.0482e-10 6319700000.0 3918870.0 5125330.0 3662910.0 2927220.0 3083620.0 5125210.0 3566540.0 4961140.0 5597160.0 5301170.0 True False 3701482.469026332 4879101.4535228275 3899027.039463215 3205422.108699215 3326283.350602224 5093221.663289877 3927080.6692760764 4943930.963278781 4580856.836921414 5254205.758047849 0.704479923222798 0.9286087523408318 0.7420773412786678 0.6100678687334391 0.6330706302293867 0.9693609077810869 0.7474166125414827 0.9409473459820599 0.8718457266171832 1.0 22.325041267759715 -7.243623810313969 0.8577260400003851 0.9724042054784896 0.7439890939913658 0.36647880976575364 0.10891546990032908 0.7249265272224743 0.974007903245563 0.10303272682277191 0.04487440527768344 5.7065836753378146e-08 7.243623810313969 -0.2284151114871238 QPDISCILGTGGKS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 QPDISCILGTGGKSPR 16 1 G3V1T4;P57740;P57740-2 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 QPDIS(0.001)CILGT(0.095)GGKS(0.903)PR 48.852 0.061213 3450100000.0 1183700.0 1234600.0 1181100.0 962630.0 1020100.0 1273300.0 1071000.0 1265100.0 1565000.0 1323500.0 True False 1118037.8013525503 1175287.9628276203 1257235.5958268167 1054118.0657747374 1100376.0664249584 1265352.8623933464 1179267.131952725 1260711.6633765593 1280835.4504395118 1311774.819667418 0.8523092413345859 0.8959525256976636 0.9584233337742915 0.8035815674842685 0.8388452422832321 0.9646113368101994 0.8989859496248841 0.9610732303096007 0.9764141156210404 1.0 20.323088656329748 -7.18618716767196 0.93301836411155 0.9961788303252997 0.8771051661873758 0.4941776885304482 0.045109732575557185 0.5359032414901777 0.8401699758120968 0.041647018890111236 0.0179268322590384 6.513476226096182e-08 7.18618716767196 -0.11907366413792397 QPEKEEEEEAGES(ph)VEDIFSEVVGR ddPTM_KYSE-520_SHP099_60min_R1 2 QPEKEEEEEAGESVEDIFSEVVGR 24 1 Q8TDD1;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 1 QPEKEEEEEAGES(0.993)VEDIFS(0.007)EVVGR;QPEKEEEEEAGES(1)VEDIFSEVVGR 83.60600000000001 0.002564 321245000.0 308985.0 276298.0 262963.0 263351.0 269418.0 243291.0 249438.0 266918.0 329347.0 234025.0 True False 291844.98610367294 263024.2293482468 279914.0157356761 288379.7998606349 290619.6638212716 241772.53062478575 274653.6273202841 265992.12375712977 269545.88696223754 231951.72056869496 1.258214361972107 1.1339611049375657 1.2067770614047961 1.2432751054986384 1.2529317010830343 1.04233988880105 1.1840982539249694 1.146756415968699 1.162077549161394 1.0 17.82346502227025 -6.245295038809158 24.991007286586974 1.1210419318864138 1.2149717381097136 0.4441192115571291 0.061569686945672684 910.5645040170568 1409530.1072964384 0.019990349145252224 0.019927301790240437 5.684666107266696e-07 6.245295038809158 0.09392980622329983 QPEKEEEEEAGESVEDIFSEVVGR ddPTM_KYSE-520_SHP099_60min_R1 6 QPEKEEEEEAGESVEDIFSEVVGR 24 1 Q8TDD1;Q8TDD1-2 Q8TDD1;Q8TDD1-2 DDX54 ATP-dependent RNA helicase DDX54 0 ;;;;; 202.44 1.3722999999999998e-15 443649000.0 549323.0 462290.0 343366.0 611985.0 387867.0 328882.0 433162.0 508731.0 386697.0 279319.0 False True 518850.95814174815 440080.8944885636 365499.9217650244 670147.870400001 418389.92623865226 326829.3254454162 476950.2422137317 506966.3308997086 316482.5726380881 276844.4509668936 1.8741605848686305 1.5896323475206322 1.320235679236109 2.4206657133978116 1.5112816051663804 1.1805521992727246 1.7228094713401634 1.8312316867074723 1.1431783137886864 1.0 18.078716079408697 -5.97758824060633 24.997780820665394 1.4377324732584371 1.7784935990680366 0.23519733116797548 0.35324639845236583 427.58456279090524 476919.9122834912 0.1099993702945528 0.12471969543810993 1.0529597234526868e-06 5.97758824060633 0.3407611258095995 QPEYSPES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 QPEYSPESPR 10 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QPEYS(0.003)PES(0.997)PR;QPEYS(0.43)PES(0.57)PR;QPEYSPES(1)PR;QPEYSPES(1)PR;QPEYSPES(1)PR;QPEYS(0.018)PES(0.982)PR 162.13 7.118100000000001e-05 11450540000.0 4692660.0 4310570.0 4477420.0 3502390.0 3909620.0 3996430.0 4012530.0 4088960.0 4672100.0 3881750.0 True False 4432348.79521421 4103483.7469025166 4766041.657325298 3835256.092568045 4217284.851305117 3971486.797969566 4418155.690919018 4074776.3521304433 3823764.4140565097 3847360.7149557993 1.1520491899770129 1.0665710992346242 1.2387821185568384 0.9968537854169223 1.0961501049047249 1.032262658016768 1.1483601404319523 1.0591095179328036 0.9938668862507318 1.0 21.875437667292893 -2.2683452024684634 0.0998341203703559 0.9372910734514096 1.4391468788506785 0.2962154689178246 0.06440524927699456 131.3540811294483 1.2306324562578774 0.9311694726228081 9.001124417575289 0.0053908195853555095 2.2683452024684634 0.5018558053992689 QPFPALK ddPTM_KYSE-520_SHP099_60min_R1 1 QPFPALK 7 0 A6NCI8 A6NCI8 C2orf78 Uncharacterized protein C2orf78 0 86.086 0.021862 0.0 242270.0 201040.0 195240.0 205370.0 211000.0 223450.0 193780.0 211100.0 235930.0 216000.0 False True 228830.80014672835 191381.73663280797 207825.4827950452 224888.3030532578 227604.49957422403 222055.36566543096 213369.1735105499 210367.74337111053 193091.05931130584 214086.40804545706 1.068871219970866 0.893946226573019 0.9707551483180451 1.0504557720708134 1.0631431563179699 1.037223089932369 0.99664978948708 0.9826300758264067 0.9019304918708652 1.0 17.70783367899782 -7.436858534505859 3.384932491576665 0.9490302818469248 1.0098956726515385 0.16509874833000893 0.05372897369230421 0.46628551994384365 10.00904642083056 0.03774391704711226 0.015211036651469742 3.657138985194008e-08 7.436858534505859 0.06086539080461362 QPGQVIGATTPSTGS(ph)PTNK ddPTM_KYSE-520_SHP099_60min_R1 5 QPGQVIGATTPSTGSPTNK 19 0 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 QPGQVIGATTPS(0.001)T(0.007)GS(0.974)PT(0.018)NK;QPGQVIGATTPST(0.007)GS(0.993)PTNK;QPGQVIGAT(0.005)T(0.306)PS(0.054)T(0.306)GS(0.323)PT(0.004)NK;QPGQVIGATTPST(0.004)GS(0.995)PT(0.001)NK;QPGQVIGATTPST(0.001)GS(0.999)PTNK 371.03 3.6923999999999993e-78 3779050000.0 2554480.0 3189350.0 2200270.0 1896260.0 1820030.0 3076780.0 2069010.0 2803340.0 2922050.0 2890220.0 True False 2412777.90217037 3036128.8386880513 2342102.924756473 2076479.9802686435 1963256.0064458533 3057576.6747464077 2278165.7223917004 2793615.8678444745 2391479.3788861143 2864614.899357134 0.8422695499879709 1.0598732972342662 0.8175978297404229 0.7248722963546127 0.6853472719444557 1.0673604593177872 0.7952781795915945 0.9752151566590703 0.834834511062133 1.0 21.449909774578416 -6.263143439130845 24.99968068426802 0.9242848821775244 0.8329013474456819 0.17137879568611558 0.11778035250436986 369.4971206922099 5420723.229552842 0.04241957609920945 0.039398939441545267 5.455776375097157e-07 6.263143439130845 -0.09138353473184246 QPGVDSLS(ph)PVASLPK ddPTM_KYSE-520_SHP099_60min_R1 4 QPGVDSLSPVASLPK 15 0 Q9UBW7;A0A087X151;Q9UBW7-2 Q9UBW7 ZMYM2 Zinc finger MYM-type protein 2 1 QPGVDS(0.146)LS(0.854)PVASLPK;QPGVDS(0.08)LS(0.92)PVASLPK;QPGVDS(0.007)LS(0.993)PVASLPK;QPGVDS(0.001)LS(0.999)PVASLPK 193.64 3.7524e-11 4521730000.0 3052850.0 3526710.0 2540510.0 2312380.0 2420200.0 3599810.0 2682150.0 3503140.0 3928080.0 3635670.0 True False 2883502.324794402 3357281.55790037 2704275.3395597236 2532147.899957603 2610655.9709456726 3577342.250508278 2953287.897261443 3490988.4249790185 3214839.690838619 3603460.7923084595 0.8002036073069535 0.9316825550222286 0.7504661478021252 0.7026988902897014 0.724485743404808 0.9927518174039992 0.8195698711541965 0.9687876811176878 0.892153370365692 1.0 21.78095171741748 -6.259558822354203 24.999212332844035 0.9255091110093883 0.7840810232183341 0.5011083183524834 0.07591442935726109 167.78306499677126 2230437.3908343622 0.026979272972543406 0.02568699595455939 5.500994080887841e-07 6.259558822354203 -0.1414280877910542 QPGYQPPNPHPGPS(ph)SPPAAPASK ddPTM_KYSE-520_SHP099_60min_R1 3 QPGYQPPNPHPGPSSPPAAPASK 23 0 Q9BUL9 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 1 QPGYQPPNPHPGPS(0.57)S(0.43)PPAAPASK;QPGYQPPNPHPGPS(0.5)S(0.5)PPAAPASK;QPGYQPPNPHPGPS(0.729)S(0.271)PPAAPASK 124.5 6.954300000000001e-05 7717700000.0 2172840.0 2545140.0 1877660.0 2005570.0 1526370.0 2477300.0 1747780.0 2022970.0 2542270.0 2402480.0 True False 2052308.2337508465 2422867.654066975 1998696.9679622205 2196178.769803394 1646486.635142697 2461838.251792225 1924462.659089013 2015952.7892347486 2080657.853411409 2381195.896301158 0.8618813080178785 1.017500348388198 0.8393668790824418 0.9223007536737482 0.6914536673359277 1.0338663255788125 0.8081916578465411 0.8466135828497935 0.8737869306105428 1.0 21.183254882497163 -4.790160986087544 24.99979656176775 0.8696130476329988 0.939691094794887 0.057698664863996996 0.09789746652897935 471.0210283375863 409984.1326455091 0.023956855064341944 0.04988486157974876 1.6212090294466812e-05 4.790160986087544 0.07007804716188815 QPGYQPPNPHPGPSS(ph)PPAAPASK ddPTM_KYSE-520_SHP099_60min_R1 1 QPGYQPPNPHPGPSSPPAAPASK 23 0 Q9BUL9 Q9BUL9 RPP25 Ribonuclease P protein subunit p25 1 QPGYQPPNPHPGPS(0.164)S(0.836)PPAAPASK 125.52 6.2218e-05 2575200000.0 806560.0 920360.0 641160.0 679960.0 519060.0 809090.0 595750.0 658830.0 865050.0 819740.0 True False 761818.5089625027 876144.5241114764 682490.1994922716 744583.1939625711 559907.0689525916 804040.1691933031 655974.2239596985 656544.6725020783 707978.7261359099 812477.7413480703 0.937648467388764 1.0783612639747762 0.8400109501583118 0.9164351908609237 0.6891352715996734 0.9896150113100114 0.8073750092787775 0.8080771190269577 0.871382303915459 1.0 19.631968763912493 -4.774393986742462 24.98879682501194 0.8563117722640883 1.008004868259957 0.2730684573713469 0.09224595517613719 224.87977418747388 433783.63922172535 0.02259394595791219 0.04749984934879165 1.681148251556987e-05 4.774393986742462 0.15169309599586867 QPLLLS(ph)EDEEDTK ddPTM_KYSE-520_SHP099_60min_R1 6 QPLLLSEDEEDTK 13 0 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK;QPLLLS(1)EDEEDTK 233.48 1.0445000000000001e-15 1856180000.0 2913350.0 2659480.0 2072570.0 2246510.0 2273770.0 2622420.0 2389890.0 2587340.0 2853560.0 2698610.0 True False 2751740.667880759 2531714.588839135 2206171.1784292473 2460017.634962137 2452702.7630184083 2606052.5040426943 2631483.4042787137 2578365.121429696 2335425.43639372 2674702.4148868117 1.0288025511044403 0.9465406599060002 0.8248286486564556 0.9197350782914069 0.9170002424820041 0.9743336266262643 0.9838415629463859 0.9639820516402411 0.8731533733978218 1.0 21.350946956744764 -6.250245966617052 23.638802250148508 0.9583597163585803 0.9223236594479327 0.07043374883366604 0.05603094687780435 998.6909027792448 2109085.8089567944 0.019425515615169222 0.019227962474447153 5.620229282547612e-07 6.250245966617052 -0.036036056910647596 QPLLLS(ph)EDEEDTKR ddPTM_KYSE-520_SHP099_60min_R1 17 QPLLLSEDEEDTKR 14 1 Q99613-2;Q99613;B5ME19;H3BPE4 Q99613-2 EIF3C;EIF3CL Eukaryotic translation initiation factor 3 subunit C;Eukaryotic translation initiation factor 3 subunit C-like protein 1 QPLLLS(0.996)EDEEDT(0.004)KR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(0.974)EDEEDT(0.026)KR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(0.97)EDEEDT(0.03)KR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(1)EDEEDTKR;QPLLLS(0.999)EDEEDT(0.001)KR;QPLLLS(0.996)EDEEDT(0.004)KR;QPLLLS(1)EDEEDTKR 254.53 2.9425000000000004e-19 329360830000.0 49991572.0 44305103.0 44512966.0 40518891.0 43306832.0 43660657.0 43446788.0 42763943.0 50249280.0 41602574.0 True False 47218439.84543196 42176619.34856459 47382343.01162373 44369794.21819126 46714833.29623226 43388154.64456464 47838813.330829285 42615604.862912335 41125277.43326591 41234007.56067284 1.1451334138684788 1.0228600575994162 1.1491083650286493 1.076048554167439 1.1329200351795732 1.0522420014771092 1.160178604042742 1.0335062581585497 0.997363095807582 1.0 25.297331348744247 -7.468635470261465 6.213182975101638 1.0035030242261425 1.1018497150824438 0.5237137754830719 0.04231557542405131 0.15681966896309624 13.709053065075803 0.022187278801366523 0.010190932677480422 3.3991046038215365e-08 7.468635470261465 0.09834669085630132 QPLSEASNQQPLS(ph)GGEEK ddPTM_KYSE-520_SHP099_60min_R1 2 QPLSEASNQQPLSGGEEK 18 0 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 QPLSEASNQQPLS(1)GGEEK;QPLSEASNQQPLS(1)GGEEK 319.81 8.1598e-48 901840000.0 783470.0 866570.0 709680.0 641000.0 562440.0 771920.0 740710.0 854580.0 842300.0 835650.0 True False 740009.3572912752 824938.6764519115 755427.1083281477 701920.4472763219 606700.8281541555 767102.1609508151 815588.1954329628 851615.6614404715 689359.5526550793 828246.7911258618 0.8934648044761602 0.9960058828969883 0.9120797284361005 0.8474774122845432 0.7325121384768036 0.9261758320947662 0.9847163963343682 1.028214863691586 0.8323117699230821 1.0 19.65970118332472 -6.517920916117736 24.86448535208424 0.9624883167956775 0.877943547884275 0.21064700670102954 0.07783990599790207 360.1528016827356 1806254.0966388981 0.03110669292454035 0.02479242658592811 3.034443698099056e-07 6.517920916117736 -0.0845447689114025 QPPGTQQSHS(ph)SPGEITSSPQGLDNPALLR ddPTM_KYSE-520_SHP099_60min_R1 2 QPPGTQQSHSSPGEITSSPQGLDNPALLR 29 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 QPPGTQQS(0.009)HS(0.575)S(0.416)PGEITSSPQGLDNPALLR;QPPGT(0.001)QQS(0.055)HS(0.597)S(0.346)PGEITSSPQGLDNPALLR 154.28 3.2814e-07 2074420000.0 123410.0 173558.0 149846.0 146348.0 118944.0 161917.0 149218.0 192995.0 222053.0 179303.0 True False 116564.20128826426 165220.01316413077 159505.31292207696 160256.86991886946 128304.21610121567 160906.41594293845 164302.41166734073 192325.54539037176 181733.7727006037 177714.5149156231 0.6559070391273761 0.9296934087942981 0.8975367768795269 0.9017657898959894 0.7219681305273974 0.905420786925227 0.9245300629796599 1.0822163033879693 1.0226163731583147 1.0 17.439201993403845 -6.9207891564779045 2.18973619550364 1.0381042973456758 0.836995407954434 0.5328581503004604 0.08394897723619103 0.2546562576945394 2.459666007985198 0.04477290753239796 0.025656985771001756 1.200081783630982e-07 6.9207891564779045 -0.20110888939124183 QPPGTQQSHSS(ph)PGEITS(ph)SPQGLDNPALLR ddPTM_KYSE-520_SHP099_60min_R1 1 QPPGTQQSHSSPGEITSSPQGLDNPALLR 29 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 2 QPPGT(0.129)QQS(0.12)HS(0.36)S(0.394)PGEIT(0.205)S(0.449)S(0.344)PQGLDNPALLR 63.727 0.021351 191140000.0 76819.0 84191.0 66305.0 91407.0 81076.0 73898.0 79421.0 80965.0 91430.0 78733.0 True False 72557.69693512002 80146.33798673272 70579.12639175093 100094.29379748327 87456.21994066253 73436.77517092864 87449.64975426458 80684.15131237298 74828.61676273766 78035.4868733472 0.9298038602986137 1.0270498871470035 0.9044491066776061 1.2826766104495235 1.1207237046217873 0.9410689689181752 1.1206395097681228 1.033941794241953 0.9589049772212693 1.0 16.2518427226717 -2.512487483194075 11.602169235103638 1.0385645302199438 0.9961570861340844 0.0 0.109720179828287 0.0 0.0 0.025380879003366615 0.0 0.003072645920752377 2.512487483194075 -0.04240744408585939 QPPGTQQSHSS(ph)PGEITSSPQGLDNPALLR ddPTM_KYSE-520_SHP099_60min_R1 5 QPPGTQQSHSSPGEITSSPQGLDNPALLR 29 0 Q5TDH0-2;Q5TDH0;Q5TDH0-3 Q5TDH0-2 DDI2 Protein DDI1 homolog 2 1 QPPGTQQS(0.001)HS(0.167)S(0.832)PGEITSSPQGLDNPALLR;QPPGTQQS(0.002)HS(0.177)S(0.82)PGEITSSPQGLDNPALLR;QPPGTQQS(0.042)HS(0.362)S(0.595)PGEITSSPQGLDNPALLR;QPPGT(0.002)QQS(0.201)HS(0.201)S(0.597)PGEITSSPQGLDNPALLR;QPPGT(0.069)QQS(0.042)HS(0.147)S(0.742)PGEITSSPQGLDNPALLR 232.27 7.6565e-26 6654210000.0 533041.0 636520.0 527256.0 549494.0 539440.0 648476.0 470947.0 619176.0 679270.0 669272.0 True False 503472.1531391112 605940.6237640008 561243.7653994274 601717.7445486047 581890.8590062538 644428.6207440422 518554.91875979496 617028.2229727651 555931.691003225 663342.7707657376 0.7589924475364707 0.9134653311507805 0.8460840912633283 0.9070992721515675 0.8772099201963732 0.9714866116655472 0.7817299616624975 0.9301800670270232 0.8380760528398895 1.0 19.339395024859492 QPPKDST(ph)TPEIK ddPTM_KYSE-520_SHP099_60min_R1 1 QPPKDSTTPEIK 12 1 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 1 QPPKDS(0.303)T(0.444)T(0.253)PEIK 91.20700000000001 0.007144 715250000.0 928470.0 997460.0 772520.0 574810.0 653500.0 855190.0 697590.0 724660.0 977130.0 843550.0 True False 876965.9182409411 949540.5243820164 822317.8752757035 629439.7695770711 704926.7320936288 849852.4419933757 768109.2050223177 722146.3235969155 799707.8234427854 836076.8032719683 1.0489059316189064 1.1357096867967278 0.9835434640185932 0.7528492204469401 0.8431363354836703 1.016476523050869 0.9187065135838468 0.8637320408493713 0.9565004319138461 1.0 19.673275950965625 -4.978663759950641 6.626438592193984 0.901261080604238 1.0863347785629802 0.48585778871720986 0.0755542357473075 0.1320559201052636 22.243175393061666 0.020528082315550727 0.04212073760868278 1.0503553214212676e-05 4.978663759950641 0.18507369795874218 QPPKDSTT(ph)PEIK ddPTM_KYSE-520_SHP099_60min_R1 1 QPPKDSTTPEIK 12 1 Q9Y4C8 Q9Y4C8 RBM19 Probable RNA-binding protein 19 1 QPPKDS(0.014)T(0.117)T(0.869)PEIK 87.647 0.0084336 812440000.0 841790.0 1045600.0 920250.0 658650.0 732290.0 941680.0 603890.0 821380.0 1183700.0 884870.0 True False 795094.2306332386 995367.8065224019 979570.787452059 721247.897969656 789917.0568398513 935802.6258215406 664937.0945984421 818530.8244915335 968769.9186487207 877030.7402184432 0.9065750995628766 1.1349292115741396 1.1169172784161203 0.8223747069458636 0.9006720296293214 1.0670123439327326 0.7581685157726915 0.9332977590815812 1.1046020101957064 1.0 19.742267884932904 -5.244953312864864 24.84423944273779 0.9340638583969546 1.0610193972914317 0.16757720491442307 0.11317051960868349 1236.3677701921001 1863183.4723738725 0.030617816636004387 0.05283026902111742 5.68914086447529e-06 5.244953312864864 0.12695553889447708 QPPKEPSEVPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 QPPKEPSEVPTPK 13 1 P17096-2 P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 QPPKEPS(0.004)EVPT(0.996)PK 75.018 0.045474 437930000.0 681150.0 641850.0 512260.0 456350.0 493070.0 637420.0 519510.0 527750.0 704050.0 737230.0 True False 643365.2516611386 611014.5625635085 545281.0992449798 499721.36679336993 531871.8038154631 633441.6253410559 572027.1407290018 525919.3584277761 576212.2676561899 730698.7157562603 0.880479516096134 0.836205879917442 0.746246144254713 0.6838952307123835 0.7278948112902938 0.8668985064322372 0.7828495225107435 0.719748573642228 0.7885770909831424 1.0 19.478917146165063 -10.302641387262536 4.864014194265586 1.0000899099699059 0.7782977793025851 0.5324635984440295 0.06138285108332363 6.44691979318859e-05 9.243064643737779e-06 0.0640226709679867 0.015521499980428118 4.9814825431485125e-11 10.302641387262536 -0.22179213066732073 QPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPPHYEGR ddPTM_KYSE-520_SHP099_60min_R1 2 QPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPPHYEGR 38 0 P14866;M0QXS5;P14866-2 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 ; 110.79 5.0828e-05 3498500000.0 347543.0 283962.0 257241.0 393447.0 130244.0 192420.0 199643.0 237003.0 222226.0 146707.0 False True 328264.09698020545 270320.03928434866 273823.1664601524 430840.08458584565 140493.4618130108 191219.0354054249 219824.86276791574 236180.89190991604 181875.3602615786 145407.2901163189 2.2575491003072115 1.8590542404586834 1.8831460667557103 2.9629881984678628 0.9662064515515193 1.3150581050816557 1.5117870815972592 1.6242713258804464 1.2507994620908414 1.0 17.14974007623219 -5.779780798185739 24.999997161056935 1.3227741714482717 2.1878869530064153 0.6529519980440074 0.34202706981690917 166.91312382763786 227507.4540759983 0.10745974011627688 0.12207072590927669 1.6604247635427156e-06 5.779780798185739 0.8651127815581436 QPPPAS(ph)SPTKR ddPTM_KYSE-520_SHP099_60min_R1 5 QPPPASSPTKR 11 1 A0A0J9YWL0;Q9Y4K1;A0A494C1M5 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 QPPPAS(0.7)S(0.292)PT(0.009)KR;QPPPAS(0.588)S(0.405)PT(0.007)KR;QPPPAS(0.494)S(0.494)PT(0.013)KR;QPPPAS(0.333)S(0.333)PT(0.333)KR;QPPPAS(0.583)S(0.404)PT(0.012)KR 102.87 0.0012952 4119580000.0 1763230.0 1746550.0 1461060.0 1355128.0 1375696.0 1644200.0 1382962.0 1585520.0 2073690.0 1733840.0 True False 1665420.1169881388 1662643.1163750016 1555242.2653786545 1483918.9576859116 1483955.448560485 1633937.937914976 1522765.2953684472 1580020.2011831496 1697160.1694708688 1718479.5265071075 0.9691242120138523 0.9675082482678184 0.9050106453928837 0.863506916897665 0.8635281512935425 0.9508044249069604 0.8861119797356801 0.91942916794279 0.9875940581732903 1.0 20.71270123326446 -7.778617045192144 4.262170467697728 0.9984893292177568 0.9132881853111636 0.4263800856991863 0.03638071792039168 0.2071882770520429 8.214162007889364 0.03580705129208284 0.010176915996739519 1.664880071291038e-08 7.778617045192144 -0.08520114390659317 QPPPASS(ph)PTKR ddPTM_KYSE-520_SHP099_60min_R1 2 QPPPASSPTKR 11 1 A0A0J9YWL0;Q9Y4K1;A0A494C1M5 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 QPPPAS(0.248)S(0.749)PT(0.003)KR;QPPPAS(0.012)S(0.977)PT(0.012)KR 109.83 0.00020187 2598100000.0 1065790.0 893710.0 828490.0 702580.0 838630.0 988180.0 862050.0 1004780.0 1095440.0 941140.0 True False 1006668.5041003096 850774.8301139405 881895.7910308695 769352.9919616204 904625.4098480176 982012.4020732417 949194.4267972421 1001294.6526974149 896535.7097951797 932802.2317958408 1.0791874952553027 0.912063459020697 0.945426330437733 0.8247761055207317 0.9697933592058663 1.052755202121098 1.0175730658039304 1.0734265191129655 0.9611208884751054 1.0 19.831211714730088 -6.006926964864383 24.95044665629903 1.023787518062568 0.9335262195703329 0.2580396401371666 0.06440557919184943 396.7829073675151 1429190.828489925 0.02026225401211712 0.022109678065308728 9.841766004446877e-07 6.006926964864383 -0.09026129849223508 QPPPLAPQS(ph)PQGGVMGGSNSNQQQQMR ddPTM_KYSE-520_SHP099_60min_R1 1 QPPPLAPQSPQGGVMGGSNSNQQQQMR 27 0 P46937-6;P46937;P46937-7;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8;P46937-4;H0YCI3 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QPPPLAPQS(1)PQGGVMGGSNSNQQQQMR 88.571 0.0041343000000000005 274140000.0 36349.0 64136.0 45121.0 55136.0 50971.0 69068.0 48300.0 73225.0 65671.0 66757.0 True False 34332.64851006494 61054.81028990132 48029.57185615255 60376.10886275713 54982.127714681425 68636.92099252624 53182.635362573885 72970.9995658435 53746.80183119054 66165.58491616018 0.5188898209479832 0.9227578108357263 0.7258996035025133 0.9125001908357794 0.8309777323717525 1.0373507780441682 0.8037809297682886 1.1028542959048364 0.8123075145378712 1.0 16.013793394451415 -3.6278950736185305 0.6973038478616261 0.9362021722856287 2.500775150442683e-32 0.4848398555906931 0.11503882565519233 5.742393187100689 1.1279536181235592 0.04359285147868924 5.184623414353455 0.00023556183370684135 3.6278950736185305 -0.9362021722856287 QPPTAAGRPVDAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 QPPTAAGRPVDASPR 15 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 QPPTAAGRPVDAS(1)PR;QPPTAAGRPVDAS(1)PR;QPPTAAGRPVDAS(1)PR 101.61 0.00069842 5326400000.0 4564010.0 4446120.0 4735370.0 4210690.0 4395210.0 4266060.0 4011450.0 4323070.0 5386920.0 4318760.0 True False 4310835.267171631 4232521.721437826 5040619.527059885 4610872.711609889 4741088.021675948 4239433.93712539 4416966.513979232 4308074.279182125 4408791.121202302 4280499.1463444345 1.0070870521848143 0.9887916284371692 1.1775775101753254 1.0771810842545302 1.107601674380629 0.9904064437779145 1.0318811809018444 1.0064420367566804 1.0299712651426247 1.0 22.02934760753191 -6.26813685406401 24.94429078161398 1.0134016247290596 1.0732370597233793 0.26381990390002763 0.04996311922751968 812.9654013961878 3027828.3909358345 0.018460313165047572 0.016615681563716518 5.393406397216202e-07 6.26813685406401 0.05983543499431976 QPPVS(ph)PGTALVGSQK ddPTM_KYSE-520_SHP099_60min_R1 3 QPPVSPGTALVGSQK 15 0 P17096;P17096-3 P17096 HMGA1 High mobility group protein HMG-I/HMG-Y 1 QPPVS(0.887)PGT(0.113)ALVGSQK;QPPVS(0.97)PGT(0.03)ALVGSQK;QPPVS(0.988)PGT(0.012)ALVGSQK 212.92 4.3301e-14 3118860000.0 2410070.0 2721710.0 1727020.0 2050970.0 2111160.0 2888050.0 2786620.0 3821380.0 2668040.0 3677010.0 True False 2276378.612744564 2590954.966230002 1838346.4725296986 2245893.572153385 2277296.2811427466 2870024.6086822506 3068318.7443903857 3808124.5246967995 2183591.191815102 3644434.5520704947 0.6246177782095981 0.7109346948645341 0.5044257061730709 0.6162529577811835 0.6248695781486753 0.78750888997354 0.8419190139241757 1.0449150534294294 0.5991577460417142 1.0 21.79726356159783 -6.411913807734819 2.289908455695441 0.8752735436416935 0.6120208573799292 0.508454829933623 0.11961349418622688 0.25227308917735225 2.6024213516777093 0.04708608392456214 0.03933739280549912 3.873345096470014e-07 6.411913807734819 -0.26325268626176435 QPS(ph)DS(ph)SVDKFVLR ddPTM_KYSE-520_SHP099_60min_R1 4 QPSDSSVDKFVLR 13 1 P42858;A0A3B3ITM9 P42858 HTT Huntingtin 2 QPS(1)DS(0.567)S(0.433)VDKFVLR;QPS(1)DS(0.678)S(0.322)VDKFVLR;QPS(1)DS(0.708)S(0.292)VDKFVLR;QPS(1)DS(0.564)S(0.437)VDKFVLR 144.97 6.1046e-06 3743480000.0 6845690.0 5878900.0 5212780.0 5050120.0 5020870.0 4918200.0 4834700.0 4329980.0 4834080.0 4499600.0 True False 6465945.929155314 5596468.819591199 5548804.139542896 5530081.886426059 5415983.904157518 4887503.689486338 5323438.658124969 4314960.310004934 3956332.929240015 4459737.0446358295 1.4498491423238848 1.254887623099355 1.244199844970007 1.2400017828579466 1.214417767225057 1.095917458937411 1.1936664885944341 0.9675369347605296 0.8871224670070382 1.0 22.088527217679687 -6.33315524417011 0.48745941830574196 0.9270326520389328 1.3699587848290935 0.7909718805761279 0.07251089723677252 0.49716330506570217 0.25192163854066557 0.06942979222382302 0.08880959971181815 4.6434925791414305e-07 6.33315524417011 0.4429261327901607 QPS(ph)DSS(ph)VDKFVLR ddPTM_KYSE-520_SHP099_60min_R1 2 QPSDSSVDKFVLR 13 1 P42858;A0A3B3ITM9 P42858 HTT Huntingtin 2 QPS(1)DS(0.31)S(0.69)VDKFVLR;QPS(1)DS(0.096)S(0.904)VDKFVLR 153.21 2.8952999999999996e-06 1614920000.0 4797500.0 4198900.0 3977100.0 3652100.0 3457600.0 3509400.0 3332200.0 3001200.0 3380100.0 3260000.0 True False 4531373.111420858 3997178.541322607 4233470.22958499 3999194.485956094 3729693.448947102 3487496.53285417 3669051.2951380727 2990789.5376853477 2766359.0453869593 3231118.936241619 1.4024160672623434 1.2370880243647284 1.3102180121259444 1.2377119396935252 1.1543039803064061 1.0793463817555304 1.1355358213479598 0.9256203800297682 0.8561613174799254 1.0 21.62360242595279 -6.323669489331881 0.6378417578254043 0.9137416214419506 1.3389696655649108 0.8412402782636617 0.06504048543018327 0.2990676098497214 0.26396373462669104 0.052708423780231405 0.05345321218124214 4.746030345014328e-07 6.323669489331881 0.4252280441229602 QPS(ph)DSSVDKFVLR ddPTM_KYSE-520_SHP099_60min_R1 5 QPSDSSVDKFVLR 13 1 P42858;A0A3B3ITM9 P42858 HTT Huntingtin 1 QPS(0.9)DS(0.05)S(0.05)VDKFVLR;QPS(0.985)DS(0.009)S(0.006)VDKFVLR;QPS(0.988)DS(0.009)S(0.003)VDKFVLR;QPS(0.964)DS(0.029)S(0.007)VDKFVLR;QPS(0.981)DS(0.012)S(0.007)VDKFVLR 170.79 4.0829999999999997e-07 4898500000.0 2475150.0 2148170.0 1907332.0 1597280.0 1881090.0 1987510.0 1766550.0 1573629.0 2029980.0 1717940.0 True False 2337848.4954108037 2044968.6887310941 2030281.6725591035 1749085.0109602583 2029121.0810619795 1975105.2128606006 1945130.1138665604 1568170.4482867687 1661386.803631436 1702720.3881370965 1.373007871226928 1.2010008824575378 1.1923752641385728 1.0272297337520508 1.191693653989772 1.1599703783552586 1.142366137986213 0.9209794275162609 0.9757249723479952 1.0 20.699410111934373 -1.0000000009476702 0.21830227469367292 0.9633466327614563 2.9119883841141188 0.6647666925337817 0.0747005679086557 34.25969437182117 0.43580033060484996 0.12897694564652126 23.470735651353284 0.09999999978179087 1.0000000009476702 1.9486417513526626 QPS(ph)EEEIIK ddPTM_KYSE-520_SHP099_60min_R1 7 QPSEEEIIK 9 0 Q15121-2;Q15121;B1AKZ5 Q15121-2 PEA15 Astrocytic phosphoprotein PEA-15 1 QPS(1)EEEIIK;QPS(1)EEEIIK;QPS(1)EEEIIK;QPS(1)EEEIIK;QPS(1)EEEIIK;QPS(1)EEEIIK;QPS(1)EEEIIK 132.79 0.00052995 26302800000.0 13658370.0 12466360.0 11942050.0 10818210.0 11992270.0 12008730.0 12550500.0 12798090.0 13380980.0 9905830.0 True False 12900712.988814434 11867457.353212148 12711853.650955586 11846369.425786575 12935993.422317455 11933779.061657788 13819227.021076282 12753696.412886675 10951331.33905565 9818072.052819123 1.3139761981182623 1.2087360216311074 1.2947403097643344 1.2065881531583438 1.3175696157783914 1.2154910859745798 1.4075295991648669 1.2990021201998236 1.1154258473700167 1.0 23.22700832371029 -7.93828219588307 3.4888743802284976 1.0022296024506914 1.2811623913096617 0.7165385938857667 0.05875915932974637 0.10701079885246652 2.6789056391545145 0.05600927744928633 0.014881389100117099 1.1527040103737767e-08 7.93828219588307 0.2789327888589703 QPS(ph)EGS(ph)SSREEEGPSTSCILESLFR ddPTM_KYSE-520_SHP099_60min_R1 2 QPSEGSSSREEEGPSTSCILESLFR 25 1 P43355 P43355 MAGEA1 Melanoma-associated antigen 1 2 QPS(0.995)EGS(0.904)S(0.052)S(0.048)REEEGPSTSCILESLFR;QPS(1)EGS(0.565)S(0.381)S(0.054)REEEGPSTSCILESLFR 125.47 9.4404e-05 92011000.0 109466.0 115227.0 107679.0 98520.0 99394.0 109594.0 100705.0 99476.0 118711.0 107595.0 True False 103393.7027649391 109691.3219607469 114620.1606324917 107883.31117888202 107215.74232549981 108909.98319416976 110885.24418608694 99130.94097387293 97156.07486078261 106641.79200764328 0.9695420605603534 1.028596011898272 1.0748146526295863 1.0116419571339326 1.005382039321089 1.0212692523618125 1.0397916435813412 0.9295693471352017 0.9110506587681797 1.0 16.702413403213566 -7.264072381108856 24.998836347398445 0.9402324969041027 1.022877568780907 0.5165528981563726 0.032913949929024376 172.95030521686598 1642039.855640918 0.016945785700222846 0.00872167361321151 5.444119115980288e-08 7.264072381108856 0.08264507187680437 QPS(ph)EGSSS(ph)REEEGPSTSCILESLFR ddPTM_KYSE-520_SHP099_60min_R1 1 QPSEGSSSREEEGPSTSCILESLFR 25 1 P43355 P43355 MAGEA1 Melanoma-associated antigen 1 2 QPS(0.784)EGS(0.354)S(0.267)S(0.595)REEEGPSTSCILESLFR 58.758 0.031967 14394000.0 28919.0 28519.0 27385.0 27274.0 28424.0 23161.0 22037.0 30919.0 34372.0 23666.0 True False 27314.80542140273 27148.904432108284 29150.280917549215 29866.11275977291 30660.807089562804 23016.44360786328 24264.71502039423 30811.749205548844 28130.911247608212 23456.3376518694 1.1644957463863002 1.1574229888332375 1.2427464743297651 1.273264104696782 1.3071438322819007 0.9812462605827529 1.034463068383585 1.3135788571449576 1.1992882974792216 1.0 14.517690155748555 -6.239170710422791 24.994767094545914 1.1208606799009388 1.2282584919159751 0.26467491762226325 0.10119135563520434 1420.8726008733424 1594814.4448682363 0.03617340884013079 0.03614369251531673 5.765397953079214e-07 6.239170710422791 0.10739781201503629 QPS(ph)EGSSSREEEGPSTSCILESLFR ddPTM_KYSE-520_SHP099_60min_R1 2 QPSEGSSSREEEGPSTSCILESLFR 25 1 P43355 P43355 MAGEA1 Melanoma-associated antigen 1 1 QPS(0.804)EGS(0.058)S(0.094)S(0.044)REEEGPSTSCILESLFR;QPS(0.864)EGS(0.049)S(0.083)S(0.004)REEEGPSTSCILESLFR 202.91 6.3415e-16 461700000.0 45347.0 43395.0 43712.0 29833.0 36822.0 37654.0 25999.1 34022.0 58641.0 35977.0 True False 42831.51151299666 41310.239062777044 46529.74546167284 32668.319350381473 39719.6819114791 37418.98741895789 28627.342754763857 33903.98562279449 47993.272619312076 35658.27176968247 1.2011662199908704 1.1585036798642612 1.3048794333670866 0.9161498224419522 1.1138981206949503 1.0493774813498513 0.8028247397874039 0.9508028275116935 1.3459225654373168 1.0 15.121949161880597 -5.259116964437824 24.986281683651075 1.0189095767996053 1.2152151674489955 0.2961747630299968 0.1380544114516869 266.8011081684488 2870430.735010904 0.03860371953135949 0.06302044329000955 5.506593725363578e-06 5.259116964437824 0.19630559064939024 QPS(ph)KEEEEEEEEEQLNQTLAEMK ddPTM_KYSE-520_SHP099_60min_R1 2 QPSKEEEEEEEEEQLNQTLAEMK 23 1 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 QPS(1)KEEEEEEEEEQLNQTLAEMK;QPS(1)KEEEEEEEEEQLNQTLAEMK 183.47 4.356600000000001e-15 173944000.0 172559.0 149041.0 139847.0 137892.0 122857.0 146375.0 149175.0 172660.0 184514.0 148876.0 True False 162986.80828216166 141880.84664489815 148861.76138311136 150997.2142212585 132525.14693929136 145461.41932995053 164255.06480770092 172061.08275914707 151010.90881942242 147557.07446377538 1.1045679027891964 0.9615319845591631 1.0088419137074738 1.0233139601742895 0.8981280458486299 0.9857976641144418 1.1131629263090657 1.1660646118420253 1.0234067689956468 1.0 17.17091356531271 -6.755340772500729 24.97542414321892 1.0894972989985972 0.9926527294121876 0.2473082016922581 0.06517511864353638 167.42116561580943 685637.6285893191 0.025050951475718373 0.018896685314240946 1.7565447867180902e-07 6.755340772500729 -0.09684456958640952 QPS(ph)MSETMPLYTLCK ddPTM_KYSE-520_SHP099_60min_R1 4 QPSMSETMPLYTLCK 15 0 A0A0A0MR03;Q9Y5B0;K7EJD2 A0A0A0MR03 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 1 QPS(0.998)MS(0.002)ETMPLYTLCK;QPS(1)MSETMPLYTLCK;QPS(1)MSETMPLYTLCK;QPS(0.947)MS(0.053)ETMPLYTLCK 188.49 4.094e-09 325580000.0 479841.0 471367.0 355527.0 367469.0 383799.0 473716.0 395242.0 484930.0 566720.0 462484.0 True False 453223.26319068135 448721.8217837083 378444.8392833128 402393.14327641646 414001.79778240656 470759.36272797186 435196.91855019546 483247.89101351344 463817.93384861294 458386.75156710704 0.9887355200411595 0.9789153378662083 0.8256016082260377 0.8778463642344314 0.9031713860992717 1.0269916421418508 0.9494098969099096 1.0542361649009544 1.0118484713245706 1.0 18.806205821924642 -6.25760879503638 24.85857467613816 1.008194038086722 0.9113985498103323 0.4654970376366925 0.050103268865160824 303.4710529034155 1969379.4152512455 0.018167911110591357 0.017509266007172144 5.525749651445116e-07 6.25760879503638 -0.09679548827638973 QPS(ph)PSPS(ph)PTER ddPTM_KYSE-520_SHP099_60min_R1 1 QPSPSPSPTER 11 0 P29590-12;P29590-13;P29590-11;H3BT57;P29590-14;P29590-10;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4 P29590-12;P29590-2 PML Protein PML 2 QPS(0.999)PS(0.109)PS(0.887)PT(0.004)ER 112.02 0.0019356999999999998 588080000.0 490270.0 390940.0 356150.0 432640.0 424010.0 394390.0 430390.0 478900.0 496330.0 423010.0 True False 463073.74577098526 372158.6555870967 379107.99886014813 473757.97552204103 457377.17471311253 391928.46571845736 473898.0214016189 477238.80767610075 406208.9834611131 419262.46049679973 1.1044960839619935 0.8876507931239825 0.9042259552904616 1.1299794762466153 1.0909089599177308 0.9348045738558294 1.1303135053877218 1.138281751031568 0.9688656193539983 1.0 18.6774941358169 -5.256334891593756 24.983142407296842 1.061407101884148 0.9576769306109296 0.18614254130833918 0.08597082674341287 635.130198207089 3108541.769878206 0.023450666246320313 0.03902146690556316 5.541981968330029e-06 5.256334891593756 -0.10373017127321837 QPS(ph)PSPSPTER ddPTM_KYSE-520_SHP099_60min_R1 2 QPSPSPSPTER 11 0 P29590-12;P29590-13;P29590-11;H3BT57;P29590-14;P29590-10;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4 P29590-12;P29590-2 PML Protein PML 1 QPS(0.946)PS(0.054)PSPTER;QPS(0.5)PS(0.5)PS(0.001)PTER 146.59 7.045100000000001e-05 1660800000.0 899740.0 781270.0 705430.0 641520.0 717990.0 872410.0 702050.0 805070.0 839380.0 802300.0 True False 849829.6286127769 743736.6164898216 750903.1465279083 702489.8679199796 774491.7281957221 866964.9655859425 773020.0653477228 802277.4000747513 686969.7510478692 795192.2461799558 1.0687096519053034 0.9352915852269396 0.9443039090675128 0.8834214258183333 0.9739679076554413 1.090258324010046 0.9721172069537317 1.0089099886585062 0.8639039859204118 1.0 19.60094416386686 -4.250534597605412 23.79193416586879 0.965296930736243 1.0687097699219164 0.21068827072155916 0.06096606514593859 1391.6515932288344 3036174.395942053 0.015748097673146107 0.21521951129158434 5.616495333640046e-05 4.250534597605412 0.10341283918567334 QPS(ph)SPYEDKDK ddPTM_KYSE-520_SHP099_60min_R1 3 QPSSPYEDKDK 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.768)S(0.232)PYEDKDK;QPS(0.5)S(0.5)PYEDKDK;QPS(0.5)S(0.5)PYEDKDK 133.16 0.00051104 2449290000.0 7984320.0 8634570.0 7357040.0 7618880.0 8702910.0 7800650.0 9330190.0 8881300.0 10163860.0 7355300.0 True False 7541413.853252683 8219752.2964462 7831286.570080194 8342976.064500203 9387779.504215699 7751963.249845801 10273376.659079364 8850492.843210993 8318359.234060144 7290137.764336809 1.0344679479371586 1.127516730432317 1.0742302578136003 1.1444195341978112 1.2877369135793986 1.0633493495511472 1.4092157091099833 1.2140364324124857 1.141042803711251 1.0 22.797514647257398 -5.523499804557354 24.456140106850267 1.2029500794076593 1.0879009277573732 0.15001737289012518 0.10907713606954278 26.224364940548515 1032613.4619172476 0.030856547638382345 0.0402382306118698 2.995712940568385e-06 5.523499804557354 -0.11504915165028606 QPS(ph)SPYEDKDKDK ddPTM_KYSE-520_SHP099_60min_R1 1 QPSSPYEDKDKDK 13 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.5)S(0.5)PYEDKDKDK 107.98 0.00027947 2064200000.0 606870.0 458330.0 502420.0 537970.0 526170.0 594400.0 577310.0 596240.0 669460.0 519650.0 True False 573205.7113346478 436311.1388326445 534806.7971004227 589098.5070534213 567576.5855022257 590690.1291185158 635670.1288026413 594171.7826034625 547902.9397132492 515046.3052815821 1.1129207324791297 0.8471299266851509 1.0383664373789405 1.1437777555386093 1.1019913737502196 1.1468680059661398 1.2341999588854689 1.1536278903672972 1.0637935542780061 1.0 18.97434261818313 -5.079185573818995 4.440979415152686 1.131156311420175 0.9719263980416318 0.311488690216183 0.08369839745857938 0.2108392097616372 7.574235083124175 0.022085281200537016 0.04089827477201376 8.333250291565071e-06 5.079185573818995 -0.1592299133785432 QPS(ph)SPYEDKDKDKK ddPTM_KYSE-520_SHP099_60min_R1 1 QPSSPYEDKDKDKK 14 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.631)S(0.369)PYEDKDKDKK 155.03 1.543e-06 9759900000.0 3329000.0 3153200.0 3047300.0 2899200.0 2934400.0 2380100.0 2626800.0 2990400.0 3269200.0 2018900.0 True False 3144333.733803026 3001715.538950309 3243733.8338523875 3174739.096323732 3165320.5855478845 2365244.9130467316 2892342.5790974987 2980027.0003646086 2675595.689825464 2001014.1166804342 1.571370090591511 1.5000971327128767 1.6210449525631299 1.5865650671122895 1.5818581983814122 1.1820231018512428 1.4454383679690008 1.4892583593104778 1.3371198471423686 1.0 20.932299914475383 -6.238255018770318 24.639132302139327 1.331013485730787 1.571695226019732 0.5164066702018333 0.13335143174650316 619.0262808621338 657868.9909279518 0.04290929418298689 0.0428823240275215 5.777566876544699e-07 6.238255018770318 0.24068174028894518 QPSEGS(ph)SS(ph)REEEGPSTSCILESLFR ddPTM_KYSE-520_SHP099_60min_R1 1 QPSEGSSSREEEGPSTSCILESLFR 25 1 P43355 P43355 MAGEA1 Melanoma-associated antigen 1 2 QPS(0.108)EGS(0.573)S(0.519)S(0.785)REEEGPST(0.001)S(0.002)CILES(0.013)LFR 70.17399999999999 0.0086506 11570000.0 22751.0 26072.0 23513.0 18600.0 20703.0 21521.0 19087.0 21750.0 26814.0 20337.0 True False 21488.956677005903 24819.46198513016 25028.685602130183 20367.73840770609 22332.208316043427 21386.6794561904 21016.500231168706 21674.55432648817 21945.253525932945 20156.830001946568 1.06608810387996 1.2313177212256747 1.2416975089690758 1.0104633717573226 1.1079226403103455 1.0610140311807492 1.0426490787062805 1.075295784326952 1.0887254356867457 1.0 14.298981148344147 -5.263417246518501 24.990968947212625 1.0602121895852339 1.1848627731191868 0.5251433855427268 0.054057418389389746 135.6563481311853 1714066.5776940666 0.014702102526717194 0.02313634353067835 5.452337784155154e-06 5.263417246518501 0.12465058353395286 QPSEGS(ph)SSREEEGPSTSCILESLFR ddPTM_KYSE-520_SHP099_60min_R1 1 QPSEGSSSREEEGPSTSCILESLFR 25 1 P43355 P43355 MAGEA1 Melanoma-associated antigen 1 1 QPS(0.421)EGS(0.507)S(0.053)S(0.018)REEEGPSTSCILESLFR 59.016999999999996 0.026241000000000004 106110000.0 9545.5 11921.0 11897.0 13470.0 8845.9 12824.0 8632.0 9685.8 18230.0 14511.0 True False 9015.99208651751 11348.297266214198 12663.899655873038 14750.18475009683 9542.022003713884 12743.960659178727 9504.606800201609 9652.202220482714 14919.891540902408 14382.443829387164 0.6268748338926543 0.7890381774359239 0.8805109761664647 1.025568736792719 0.6634492800324373 0.8860775547156611 0.660847830379227 0.6711100237889122 1.0373683163925935 1.0 13.812021215339282 -7.776189760578969 24.989178821304883 1.0186844090277711 0.7838641606287261 0.39205065736907474 0.12079991938870908 294.44500680436624 498815.6623331735 0.11794103143959243 0.030977158661757844 1.674211186550353e-08 7.776189760578969 -0.23482024839904503 QPSEGSS(ph)SREEEGPSTSCILESLFR ddPTM_KYSE-520_SHP099_60min_R1 1 QPSEGSSSREEEGPSTSCILESLFR 25 1 P43355 P43355 MAGEA1 Melanoma-associated antigen 1 1 QPS(0.227)EGS(0.15)S(0.396)S(0.227)REEEGPSTSCILESLFR 154.82 2.1983e-07 91893000.0 20143.0 19250.0 17775.0 12405.0 12767.0 18769.0 16656.0 19898.0 20926.0 11263.0 True False 19025.627635925 18325.201105160926 18920.804941005557 13583.967470300753 13771.690265706733 18651.85570899294 18339.751026895046 19828.978482228107 17126.365901531757 11163.2185824814 1.7043138137402587 1.6415696754266667 1.6949238072519917 1.2168504423642004 1.2336666315321323 1.6708313620467459 1.6428730559550166 1.7762779019077892 1.5341781382305288 1.0 13.446465424953313 -8.053515855338258 22.552262169407076 0.999999998278022 1.567346577233203 0.4657283765594571 0.18297555482793407 5960.944343617066 2512013.9640595424 0.19544639407497183 0.05046404199204571 8.840648929354782e-09 8.053515855338258 0.5673465789551809 QPSGS(ph)FSTPGSATYVR ddPTM_KYSE-520_SHP099_60min_R1 3 QPSGSFSTPGSATYVR 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 QPS(0.001)GS(0.971)FS(0.019)T(0.009)PGSATYVR;QPS(0.006)GS(0.944)FS(0.024)T(0.024)PGS(0.003)ATYVR;QPS(0.033)GS(0.888)FS(0.033)T(0.045)PGSATYVR 200.94 1.4467e-12 1877530000.0 652510.0 613570.0 551180.0 502330.0 525710.0 539170.0 542280.0 575520.0 654020.0 618730.0 True False 616313.9695535629 584093.1762126539 586709.9447191813 550071.2921689784 567080.3861192673 535804.8400350433 597098.9545427869 573523.6554473774 535266.4545025227 613248.5335646564 1.0049986845807652 0.952457518026941 0.9567245783838845 0.8969793844781904 0.9247154376757732 0.873715648238973 0.9736655236205848 0.9352222207750445 0.87283772435811 1.0 19.226112353368034 -4.31344490308177 1.302366006064532 0.9234236998006613 1.0327394650523747 0.26687980190850313 0.03866984868716325 1.5951804486973233 2.5520244632660902 0.011075360547356129 0.22686473949476063 4.8590917206092815e-05 4.31344490308177 0.10931576525171338 QPSPS(ph)PSPTER ddPTM_KYSE-520_SHP099_60min_R1 3 QPSPSPSPTER 11 0 P29590-12;P29590-13;P29590-11;H3BT57;P29590-14;P29590-10;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4 P29590-12;P29590-2 PML Protein PML 1 QPS(0.01)PS(0.955)PS(0.032)PT(0.003)ER;QPS(0.087)PS(0.781)PS(0.066)PT(0.066)ER;QPS(0.002)PS(0.997)PS(0.001)PTER 157.97 2.5537e-05 2411820000.0 935180.0 1030660.0 861580.0 779890.0 821760.0 970800.0 792050.0 899260.0 1116680.0 982370.0 True False 883303.7011648896 981145.5465478014 917118.8253767419 854010.5111175216 886427.8368251877 964740.8771000234 872118.1436630781 896140.6769488623 913919.0612120075 973666.9660722942 0.9071928410266153 1.007680840303821 0.9419225025948414 0.8771074103114964 0.9104014696123222 0.9908325030186883 0.8957047677001335 0.9203769956002845 0.9386362001154198 1.0 19.8930688704034 -8.049749715958908 19.9313173645124 1.0000000007090524 0.9323850186213258 0.21957483408042422 0.038522334383460886 1477.7515172665544 592036.4178819009 0.03811037617211562 0.009840056816178012 8.917647143490524e-09 8.049749715958908 -0.06761498208772654 QPSS(ph)PGPTPR ddPTM_KYSE-520_SHP099_60min_R1 1 QPSSPGPTPR 10 0 Q13424-2;Q13424 Q13424-2 SNTA1 Alpha-1-syntrophin 1 QPS(0.28)S(0.72)PGPTPR 72.62 0.034481 0.0 458310.0 385460.0 459180.0 228100.0 357490.0 406920.0 295380.0 330790.0 383370.0 404670.0 True False 432886.6306816662 366941.9230127445 488779.4775139765 249778.55541923453 385622.42916013906 404380.26134069014 325239.89303099585 329642.5666969665 313759.67197124334 401084.9386284958 1.0792891704233918 0.9148733539272185 1.2186433107793848 0.6227572550426569 0.9614482919223281 1.008216022081165 0.8109002899564093 0.8218772009344817 0.7822773725788359 1.0 18.613548266134107 -5.247778629068664 24.995345811330818 0.8593696188745701 1.055329060982854 0.36362983222252754 0.1284559394339508 928.4639206464658 1698826.207258516 0.0342691903730866 0.058946212882900646 5.6522501094487575e-06 5.247778629068664 0.19595944210828398 QPSS(ph)PYEDKDK ddPTM_KYSE-520_SHP099_60min_R1 10 QPSSPYEDKDK 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.368)S(0.621)PY(0.011)EDKDK;QPS(0.019)S(0.981)PYEDKDK;QPS(0.065)S(0.935)PYEDKDK;QPS(0.026)S(0.974)PYEDKDK;QPSS(1)PYEDKDK;QPS(0.006)S(0.994)PYEDKDK;QPSS(1)PYEDKDK;QPS(0.002)S(0.998)PYEDKDK;QPS(0.003)S(0.997)PYEDKDK;QPS(0.006)S(0.994)PYEDKDK 224.59 2.3726e-11 50134690000.0 34885960.0 27893180.0 26658140.0 29169810.0 30667570.0 31171280.0 33500190.0 32947400.0 34112410.0 31301670.0 True False 32950766.255362906 26553149.76428325 28376566.358932108 31942099.97217685 33080933.284395672 30976728.47912078 36886716.13554753 32833113.15938097 27918456.24787684 31024361.55613076 1.0620932906466682 0.8558806187273837 0.9146543211724717 1.0295812184365398 1.0662889298960774 0.998464655689246 1.18895971698919 1.0583010096751784 0.899888179725002 1.0 24.886898185952138 -5.325953721247526 5.601541477295348 1.0439816001281013 0.9355400094866114 0.19075429312239145 0.083306911745645 0.3014626803262943 18.855962712556902 0.023774710808929907 0.035914908411573535 4.721133473429441e-06 5.325953721247526 -0.10844159064148984 QPSS(ph)PYEDKDKDK ddPTM_KYSE-520_SHP099_60min_R1 9 QPSSPYEDKDKDK 13 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.359)S(0.635)PY(0.006)EDKDKDK;QPS(0.006)S(0.994)PYEDKDKDK;QPS(0.009)S(0.991)PYEDKDKDK;QPS(0.03)S(0.97)PYEDKDKDK;QPS(0.02)S(0.98)PYEDKDKDK;QPS(0.003)S(0.997)PYEDKDKDK;QPS(0.055)S(0.945)PYEDKDKDK;QPS(0.003)S(0.997)PYEDKDKDK;QPS(0.008)S(0.992)PYEDKDKDK 226.25 7.9245e-12 31327760000.0 24223200.0 18486030.0 18760990.0 20630590.0 19677690.0 20042550.0 22520490.0 23270460.0 22981700.0 20370400.0 True False 22879490.808247976 17597933.370703265 19970353.43404536 22591315.070786923 21226212.25225932 19917457.01104358 24797080.908001877 23189740.205626193 18808802.601511627 20189934.103931382 1.1332127529724272 0.8716191583446821 0.9891242502944442 1.1189395148341739 1.051326475014406 0.9865043099454819 1.2281902843443848 1.1485792913564135 0.9315930653705887 1.0 24.26713286620898 -5.234182395268502 18.58673789888229 1.0754165070236479 0.9853478755960262 0.08069636614110265 0.1001288770846124 63.23207985359331 43114.198547653614 0.02694873043063406 0.0466057894693353 5.832001200813569e-06 5.234182395268502 -0.09006863142762167 QPSS(ph)PYEDKDKDKK ddPTM_KYSE-520_SHP099_60min_R1 5 QPSSPYEDKDKDKK 14 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QPS(0.203)S(0.797)PYEDKDKDKK;QPS(0.206)S(0.794)PYEDKDKDKK;QPS(0.026)S(0.974)PYEDKDKDKK;QPS(0.206)S(0.794)PYEDKDKDKK;QPSS(1)PYEDKDKDKK 205.62 7.1198e-12 37786500000.0 12221800.0 10455000.0 10877500.0 9930420.0 9908370.0 9989800.0 9966890.0 9802850.0 12235400.0 8429030.0 True False 11543832.390445724 9952726.106725067 11578681.054615349 10874204.131110346 10688102.348086514 9927449.952671852 10974440.508672554 9768846.201352393 10013759.789333936 8354355.351886108 1.381774164997608 1.1913218539929722 1.3859454819576602 1.3016209717073322 1.2793449521719866 1.1882963477763244 1.3136190701051431 1.16931178886794 1.198627466459539 1.0 22.9940970790567 -8.912547018396143 0.27027317842868903 0.9082078822129259 1.33739252612627 0.686379642989287 0.06173080817713743 3.274839400409212 0.4005295519174134 0.4015084344227177 0.09691684587727008 1.2230746970964069e-09 8.912547018396143 0.4291846439133441 QPSVETLDS(ph)PTGSHVEWCK ddPTM_KYSE-520_SHP099_60min_R1 2 QPSVETLDSPTGSHVEWCK 19 0 E9PPP8;Q8NEC6;F8WA39;Q13613-2;Q13613 E9PPP8 MTMR1 Myotubularin-related protein 1 1 QPSVETLDS(0.983)PT(0.016)GSHVEWCK;QPSVETLDS(0.997)PT(0.003)GSHVEWCK 210.22 1.1437000000000001e-18 1338690000.0 1219580.0 1131360.0 944830.0 940190.0 1007140.0 1114190.0 1027820.0 1095660.0 1195050.0 1122080.0 True False 1151927.4662275438 1077007.7673940184 1005735.2535814495 1029545.374921568 1086396.1881572725 1107235.9269222035 1131722.0761565375 1091859.4111889673 978059.0447589371 1112139.2441650298 1.035776295343652 0.9684109009233035 0.9043249384986264 0.9257342372577891 0.9768526682761881 0.995591094129128 1.0176082555257817 0.9817650235054081 0.879439377659263 1.0 20.08490599973265 -4.2737948427998935 5.13739872314029 0.9606936898305148 1.0386027335719155 0.2221877673205287 0.042101508407079824 0.2454249996032244 21.088748464615403 0.011157578597889118 0.06612827954277185 5.323596822845052e-05 4.2737948427998935 0.07790904374140062 QPT(ph)PPFFGR ddPTM_KYSE-520_SHP099_60min_R1 3 QPTPPFFGR 9 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 QPT(1)PPFFGR;QPT(1)PPFFGR;QPT(1)PPFFGR 103.21 0.0094027 38029400000.0 2917360.0 2966420.0 2604050.0 2148930.0 2230180.0 2716410.0 2311530.0 2577940.0 3189600.0 2773660.0 True False 2755528.225187023 2823908.7305128034 2771911.229627316 2353163.661100638 2405682.47801158 2699455.8775888756 2545202.010758806 2568997.7278357204 2610449.0432727532 2749087.5302748275 1.0023428482510166 1.0272167398869603 1.0083022817939182 0.8559798970334681 0.8750839875116974 0.9819461358944107 0.9258352026733616 0.9344910627777998 0.9495692714490562 1.0 21.390521411963707 -5.110065901180775 9.566564370450866 0.928627576280568 1.015505318713829 0.44728585088713757 0.04107806729229905 0.32423891730831694 25.915739108030714 0.01136647090999119 0.019731246737890246 7.761293354395848e-06 5.110065901180775 0.08687774243326096 QPTPPFFGR ddPTM_KYSE-520_SHP099_60min_R1 1 QPTPPFFGR 9 0 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 0 83.16799999999999 0.045894 0.0 117590.0 94043.0 92247.0 61516.0 58593.0 92882.0 81678.0 103380.0 142420.0 102450.0 False True 111067.04829014665 89525.0331185792 98193.38922041866 67362.46214454024 63203.935751433775 92302.28898517137 89934.8093404619 103021.39890907345 116560.1181160353 101542.37270489389 1.0938000100995642 0.8816519718202773 0.9670188572980447 0.6633926345242244 0.622439027844261 0.9090026806190911 0.8856874912883284 1.0145656061088701 1.147896341311489 1.0 16.631722350958235 -7.269817256285384 2.3475420905783437 1.077216547651968 0.8450970455605781 0.3139600281701025 0.13273979037444192 0.3939805627831326 4.1526180762016125 0.09689915332133464 0.04108479120574932 5.372578177450812e-08 7.269817256285384 -0.23211950209138987 QQADKESEVS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 QQADKESEVSPSR 13 1 Q86SQ7-2;Q86SQ7-3;Q86SQ7-4;Q86SQ7 Q86SQ7-2 SDCCAG8 Serologically defined colon cancer antigen 8 1 QQADKES(0.01)EVS(0.99)PSR 196.37 1.9773e-08 0.0 332230.0 289850.0 271970.0 254250.0 290550.0 284230.0 230130.0 253860.0 336030.0 227760.0 True False 313800.53961591475 275925.17092627997 289501.62136738567 278413.84355695045 313414.631996639 282456.0151402345 253393.78625236326 252979.41891136958 275015.4226269577 225742.2235945984 1.3900834970929354 1.2223019979718244 1.2824433850146273 1.2333263982414868 1.388373991387132 1.2512325370174706 1.1224917616981713 1.1206561842222542 1.218271966350642 1.0 17.78431676480189 -7.690308785166586 0.36833031774610187 0.9880056186350745 1.3242066990784227 0.6313891992170115 0.06923199359313993 0.8711260218197878 0.3609938006378687 0.10997511344807546 0.07679379716787497 2.0402867765302065e-08 7.690308785166586 0.3362010804433482 QQASKS(ph)PYNGVR ddPTM_KYSE-520_SHP099_60min_R1 6 QQASKSPYNGVR 12 1 Q9UK58;Q9UK58-6 Q9UK58 CCNL1 Cyclin-L1 1 QQAS(0.085)KS(0.915)PYNGVR;QQAS(0.018)KS(0.982)PYNGVR;QQAS(0.013)KS(0.987)PYNGVR;QQAS(0.002)KS(0.998)PYNGVR;QQAS(0.007)KS(0.993)PYNGVR;QQAS(0.323)KS(0.677)PYNGVR 236.05 5.0026000000000005e-15 19257000000.0 10424900.0 10265380.0 9950900.0 8303010.0 9052900.0 8855240.0 8092140.0 7930670.0 11938300.0 8888400.0 True False 9846610.01547706 9772215.736150492 10592350.936002938 9092125.574009024 9765311.72604499 8799971.162475513 8910172.482875753 7903160.356802284 9770605.6600524 8809655.691070564 1.1177065666093566 1.1092619369966497 1.202356971423901 1.0320636688701432 1.108478250284296 0.9989006915894719 1.0114098433957042 0.8971020700403648 1.1090791743377497 1.0 23.070654204532083 -5.981998692131479 1.2594360640355415 0.9942000108479406 1.1330124313450718 0.4492795789211974 0.06109330362620159 0.3807691531415288 1.2608783851794938 0.025595341713169465 0.029626976598977915 1.0423205683146215e-06 5.981998692131479 0.13881242049713116 QQDLHLES(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 4 QQDLHLESPQR 11 0 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QQDLHLES(1)PQR;QQDLHLES(1)PQR;QQDLHLES(1)PQR;QQDLHLES(1)PQR 132.09 0.0001353 3064070000.0 1806030.0 1720320.0 1771220.0 1737230.0 1889750.0 1760270.0 1745820.0 1909140.0 1743020.0 1894730.0 True False 1705845.915668453 1637673.2449470344 1885395.6752522013 1902335.816882753 2038462.5737933198 1749283.5019909956 1922304.5231612595 1902517.6389366272 1426531.5059585136 1877944.166277634 0.9083581643695482 0.8720564084677488 1.0039679076238657 1.0129884855168336 1.0854756016702334 0.9314885572228364 1.0236217655882467 1.0130853052504225 0.7596240248111914 1.0 20.840722739753666 -4.760839086701771 24.99892548321853 0.9841933844564502 0.890207265851147 0.15339601439002426 0.0824533681207673 26.3083623028085 1095353.8858105936 0.02115659608639998 0.04956608713116512 1.7344465198753564e-05 4.760839086701771 -0.09398611860530326 QQDLHLES(ph)PQRQPEYS(ph)PES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 3 QQDLHLES(1)PQRQPEY(0.008)S(0.992)PES(1)PR;QQDLHLES(1)PQRQPEY(0.031)S(0.969)PES(1)PR;QQDLHLES(1)PQRQPEY(0.017)S(0.983)PES(1)PR 127.92 0.00027306 2141070000.0 979120.0 899800.0 884460.0 896660.0 907670.0 908130.0 757890.0 937010.0 1036860.0 875690.0 True False 924806.261772671 856572.2573726637 941473.7067860363 981878.2968093414 979098.4650641519 902462.0238162801 834504.9174936053 933759.7310097788 848592.3611135543 867932.067876511 1.065528393293854 0.9869116363776714 1.0847320218153165 1.1312847320085915 1.1280819102117305 1.0397841688511986 0.9614864439048912 1.075844257367195 0.9777174879477915 1.0 19.727222603312832 -6.5192562746282805 24.953018914014798 1.008732811405172 1.0780205300371428 0.36834520618950295 0.04649679860820627 191.47315861167993 1318958.7030586188 0.01872698521348083 0.014816790148560565 3.025127791127525e-07 6.5192562746282805 0.06928771863197092 QQDLHLES(ph)PQRQPEYS(ph)PESPR ddPTM_KYSE-520_SHP099_60min_R1 5 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 QQDLHLES(0.995)PQRQPEY(0.024)S(0.962)PES(0.019)PR;QQDLHLES(0.999)PQRQPEY(0.169)S(0.831)PES(0.001)PR;QQDLHLES(1)PQRQPEY(0.002)S(0.981)PES(0.017)PR;QQDLHLES(1)PQRQPEY(0.003)S(0.711)PES(0.286)PR;QQDLHLES(1)PQRQPEYS(0.804)PES(0.196)PR 149.2 5.8372e-07 7118710000.0 3791430.0 3444580.0 4079620.0 3244040.0 4203210.0 3997330.0 3076900.0 3172060.0 4348470.0 3281400.0 True False 3581111.8198716794 3279097.2063800083 4342598.832822788 3552352.586243809 4533978.714006516 3972381.180735725 3387943.0796501795 3161056.864224367 3558897.464008114 3252329.348890566 1.1010913827325846 1.0082303649532214 1.3352272685126845 1.0922487255036417 1.394071211008549 1.221395730444945 1.0416974162859227 0.9719362724758076 1.0942610917378723 1.0 21.633041929428433 -6.8027048133923715 6.6831253377049284 1.023068181835237 1.1948363823379948 0.3476569166168434 0.11077078215528496 0.23387299072424192 27.08124279329686 0.04770135110797028 0.0324703483483489 1.5750530521297376e-07 6.8027048133923715 0.17176820050275787 QQDLHLES(ph)PQRQPEYSPES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 2 QQDLHLES(1)PQRQPEY(0.015)S(0.411)PES(0.575)PR;QQDLHLES(1)PQRQPEYS(0.003)PES(0.997)PR;QQDLHLES(1)PQRQPEYS(0.014)PES(0.985)PR;QQDLHLES(1)PQRQPEYSPES(1)PR;QQDLHLES(1)PQRQPEYSPES(1)PR 180.6 4.2460000000000006e-10 5680980000.0 1531940.0 1530730.0 1612210.0 1305550.0 1478820.0 1443040.0 1431390.0 1462410.0 1858370.0 1587130.0 True False 1446960.234353323 1457191.4331274282 1716135.6362272063 1429629.0794720803 1595194.720665186 1434033.4520914897 1576088.8702201783 1457337.2410390612 1520936.8536953833 1573069.2629684536 0.9198325009687386 0.9263364731808702 1.090947281614784 0.9088150872481641 1.014065151622746 0.9116149465570277 1.0019195640794778 0.9264291632582021 0.9668594317489275 1.0 20.58515076400733 -6.243758131484184 24.810406166525013 0.9593011158124312 0.972560451873393 0.00815608576343374 0.05621640567253944 5183.326564680014 7273276.074856552 0.01804700752454615 0.018018511174722918 5.704818982243138e-07 6.243758131484184 0.013259336060961857 QQDLHLES(ph)PQRQPEYSPESPR ddPTM_KYSE-520_SHP099_60min_R1 4 QQDLHLESPQRQPEYSPESPR 21 1 Q9H6F5 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 QQDLHLES(1)PQRQPEYSPESPR;QQDLHLES(1)PQRQPEYSPESPR;QQDLHLES(1)PQRQPEYSPESPR;QQDLHLES(1)PQRQPEYSPESPR 118.43 6.6563e-05 5652600000.0 554677.0 563873.0 511107.0 536756.0 561230.0 510344.0 455573.0 467573.0 604512.0 512611.0 True False 523907.96108881384 536783.6946893715 544053.7750201139 587769.1288584246 605395.6080381136 507158.75379350514 501626.76480401424 465951.09839535854 494747.8593074055 508069.66534532304 1.0311734725054404 1.0565159294139952 1.0708251488510603 1.1568671954837761 1.1915602314628257 0.9982071128942548 0.9873188639653783 0.9171008036440486 0.9737795681447287 1.0 18.95466680402744 -6.452820308262283 6.872011903322202 0.966614512163047 1.1003372627540167 0.6353685150401617 0.04812359254178584 0.17931614337162943 14.924556587067782 0.01899595601487148 0.01662497646535992 3.525166966002545e-07 6.452820308262283 0.13372275059096972 QQDPS(ph)PGSNLGGGDDLK ddPTM_KYSE-520_SHP099_60min_R1 1 QQDPSPGSNLGGGDDLK 17 0 Q13951-2;J3KTD8 Q13951-2 CBFB Core-binding factor subunit beta 1 QQDPS(0.999)PGS(0.001)NLGGGDDLK 237.76 3.2239e-23 268350000.0 304760.0 342050.0 239020.0 195410.0 205590.0 280370.0 255030.0 260700.0 328210.0 246680.0 True False 287854.35527600197 325617.4045724829 254427.61164552145 213981.7076478412 221768.76335291367 278620.10683202895 280810.9212529446 259795.69254783753 268615.3375008002 244494.6071141362 1.1773443949282054 1.3317979010493126 1.0406266814987386 0.8752001124832548 0.9070497135725635 1.1395756745749492 1.148536258396305 1.0625825068875994 1.0986554700382567 1.0 17.899443118037645 -4.775461255673355 24.81120049084372 1.0339150787804015 1.254571114565525 0.4817350012274211 0.09150071522661535 170.80268142445303 302230.36371625896 0.026642001442984963 0.05591093526034127 1.677021939739283e-05 4.775461255673355 0.2206560357851235 QQDS(ph)QPEEVMDVLEMVENVK ddPTM_KYSE-520_SHP099_60min_R1 3 QQDSQPEEVMDVLEMVENVK 20 0 Q9H307 Q9H307 PNN Pinin 1 QQDS(1)QPEEVMDVLEMVENVK;QQDS(1)QPEEVMDVLEMVENVK;QQDS(1)QPEEVMDVLEMVENVK 154.14 3.8521e-07 804764000.0 63988.0 68450.8 48964.4 54773.1 44917.8 62394.899999999994 47823.4 67330.8 80482.6 64641.200000000004 True False 60438.45808308439 65162.32082125457 52120.72356980998 59978.71895586696 48452.57531267815 62005.47028488703 52657.85598340613 67097.24516992678 65868.98864124155 64068.52925809261 0.9433408068353668 1.0170722127669851 0.8135152183663795 0.9361650665375769 0.7562617071712789 0.9677991832012439 0.821898935299109 1.0472730675560438 1.0281020869996251 1.0 15.967328252267789 -7.27647847104158 24.567580255878934 1.0282657033038873 0.8945758753479435 0.39017630985511564 0.07524528289632451 683.1857798434075 1116032.1055648741 0.04011505711888802 0.019397530714707862 5.2908022426127314e-08 7.27647847104158 -0.13368982795594386 QQELLRQAMRNINPS(ph)TANSPK ddPTM_KYSE-520_SHP099_60min_R1 1 QQELLRQAMRNINPSTANSPK 21 2 P46937-6;P46937;P46937-4 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QQELLRQAMRNINPS(0.922)T(0.077)ANS(0.001)PK 53.266000000000005 0.039021 698990000.0 293020.0 264680.0 294860.0 263010.0 261110.0 277730.0 310780.0 288960.0 330060.0 265060.0 True False 276765.5964791117 251964.37550722068 313867.1473926806 288006.39132315986 281657.8714873258 275996.58405128727 342196.6753205114 287957.66520377115 270129.42413550447 262711.77461355965 1.0534952111919031 0.9590905313545689 1.1947205177779672 1.0962827674808553 1.0721174256526387 1.0505680015951668 1.3025555319089577 1.0960972938017237 1.0282349336372758 1.0 18.00312133724527 -4.749352935307077 24.99997133082316 1.1121196644084774 1.0062928724199174 0.17237511153420793 0.08546850343843715 362.50642637258073 749805.7594925432 0.02170558130690924 0.0564778769176626 1.780930881545356e-05 4.749352935307077 -0.10582679198856004 QQFHDAK ddPTM_KYSE-520_SHP099_60min_R1 6 QQFHDAK 7 0 P26639;P26639-2 P26639 TARS Threonine--tRNA ligase, cytoplasmic 0 ;;;;; 98.458 0.009425 6654840000.0 10384400.0 9020500.0 5072400.0 5135610.0 9732600.0 10487100.0 6957570.0 8223000.0 7565200.0 10199100.0 False True 9808356.63121181 8587141.639953466 5399375.020126959 5623696.830322547 10498500.24908103 10421646.118907766 7660909.074939622 8194476.332262633 6191550.38317252 10108743.908779724 0.970284411171301 0.8494766231534757 0.5341291726104025 0.5563200414482962 1.0385563571318484 1.0309536192579059 0.7578497530524945 0.8106324985783352 0.6124945333509723 1.0 23.269100406342957 -4.516481848842307 24.900045636545073 0.7866908799081932 0.9400825494876479 0.08117618928022974 0.17835945606529327 659.8522849337137 2568461.425539049 0.04844756767423209 0.139292178540859 3.044515231614527e-05 4.516481848842307 0.15339166957945471 QQFHSKPVDS(ph)DS(ph)DDDPLEAFMAEVEDQAAR ddPTM_KYSE-520_SHP099_60min_R1 17 QQFHSKPVDSDSDDDPLEAFMAEVEDQAAR 30 1 Q86XP3;J3KTK9 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 2 QQFHS(0.023)KPVDS(0.981)DS(0.996)DDDPLEAFMAEVEDQAAR;QQFHS(0.101)KPVDS(0.952)DS(0.947)DDDPLEAFMAEVEDQAAR;QQFHS(0.295)KPVDS(0.852)DS(0.852)DDDPLEAFMAEVEDQAAR;QQFHS(0.037)KPVDS(0.985)DS(0.978)DDDPLEAFMAEVEDQAAR;QQFHS(0.001)KPVDS(0.999)DS(1)DDDPLEAFMAEVEDQAAR;QQFHS(0.007)KPVDS(0.997)DS(0.996)DDDPLEAFMAEVEDQAAR;QQFHS(0.001)KPVDS(0.999)DS(1)DDDPLEAFMAEVEDQAAR;QQFHS(0.06)KPVDS(0.973)DS(0.967)DDDPLEAFMAEVEDQAAR;QQFHS(0.001)KPVDS(0.999)DS(1)DDDPLEAFMAEVEDQAAR;QQFHS(0.026)KPVDS(0.989)DS(0.985)DDDPLEAFMAEVEDQAAR;QQFHS(0.039)KPVDS(0.982)DS(0.979)DDDPLEAFMAEVEDQAAR;QQFHS(0.002)KPVDS(0.998)DS(1)DDDPLEAFMAEVEDQAAR;QQFHS(0.049)KPVDS(0.976)DS(0.976)DDDPLEAFMAEVEDQAAR;QQFHS(0.001)KPVDS(0.999)DS(1)DDDPLEAFMAEVEDQAAR;QQFHS(0.046)KPVDS(0.979)DS(0.975)DDDPLEAFMAEVEDQAAR;QQFHS(0.003)KPVDS(0.998)DS(0.999)DDDPLEAFMAEVEDQAAR;QQFHS(0.012)KPVDS(0.99)DS(0.998)DDDPLEAFMAEVEDQAAR 300.48 1.0328e-52 4955114000.0 1252669.9 1241044.8 1294806.9 1173313.0 1190282.3 1105440.0 1066960.4 1136869.2 1667742.0 1098672.5 True False 1183181.8035114645 1181423.1449617788 1378272.22453829 1284824.3147505845 1283950.7452301271 1098540.5389178514 1174819.169762029 1132925.6660924647 1364922.0931545617 1088939.1164042705 1.086545414419851 1.0849303943299373 1.2657018227882302 1.1798862722400278 1.1790840515214427 1.0088172262057087 1.078865798889968 1.0403939476739892 1.2534420635577868 1.0 20.054491863216374 -6.234733829106928 24.67154979660467 1.0789885409453726 1.1621645831843321 0.2056727041648213 0.08129604110248324 1088.9665988700874 1006026.8371328295 0.027112673658176725 0.027105066595711685 5.824600871971886e-07 6.234733829106928 0.08317604223895958 QQFHSKPVDS(ph)DSDDDPLEAFMAEVEDQAAR ddPTM_KYSE-520_SHP099_60min_R1 2 QQFHSKPVDSDSDDDPLEAFMAEVEDQAAR 30 1 Q86XP3;J3KTK9 Q86XP3 DDX42 ATP-dependent RNA helicase DDX42 1 QQFHS(0.026)KPVDS(0.83)DS(0.144)DDDPLEAFMAEVEDQAAR;QQFHS(0.097)KPVDS(0.451)DS(0.451)DDDPLEAFMAEVEDQAAR 125.42 8.994399999999999e-05 78322000.0 37130.0 33568.0 34331.0 30938.0 28650.0 26849.0 30495.0 27555.0 44439.0 26713.0 True False 35070.32488318006 31955.342893404777 36544.03119154216 33878.338218151104 30904.592003798683 26681.425431869135 33577.732202519495 27459.418136385346 36369.997816026465 26476.34360239952 1.3245909408730319 1.2069394238602003 1.3802521881544936 1.279570122178077 1.1672530190686088 1.0077458516383293 1.2682163635116288 1.0371302982295763 1.373679023138614 1.0 14.692416278472761 -5.769810120251038 4.418928324347007 1.1421478504571985 1.2991407664868189 0.3038777516328035 0.11607992464696715 0.2514393319235684 11.745346973068584 0.03396340741367514 0.04128309427687906 1.6989863111752036e-06 5.769810120251038 0.1569929160296204 QQFS(ph)PSMTER ddPTM_KYSE-520_SHP099_60min_R1 2 QQFSPSMTER 10 0 Q8TDB6 Q8TDB6 DTX3L E3 ubiquitin-protein ligase DTX3L 1 QQFS(0.988)PS(0.012)MTER;QQFS(0.934)PS(0.066)MTER 138.89 0.00025535 1207950000.0 3611760.0 2923410.0 3107610.0 3210130.0 3246290.0 3303460.0 3360840.0 3738040.0 3787080.0 3649710.0 True False 3411408.472934938 2782964.9954721327 3307931.5129517997 3515219.7900392218 3501754.554136533 3282841.880783734 3700586.505837531 3725073.6117050955 3099441.736517871 3617376.4088314106 0.9430615140316542 0.7693324334945741 0.9144559866304937 0.9717594722675845 0.9680370960532058 0.9075201222546404 1.0230028859598277 1.0297721858888542 0.8568203543736667 1.0 21.78651229584981 -4.996351934320129 24.429591784875534 0.9648186260218274 0.8526212482230795 0.329134634068072 0.062421029762671075 84.47687601055354 565678.3049371967 0.015680455053089754 0.03238461981880439 1.0084353604897645e-05 4.996351934320129 -0.11219737779874794 QQFVEYDKNSDDTVTWDEYNIQMYDR ddPTM_KYSE-520_SHP099_60min_R1 2 QQFVEYDKNSDDTVTWDEYNIQMYDR 26 1 Q14257;Q14257-2;H0YL43 Q14257 RCN2 Reticulocalbin-2 0 ; 365.82 3.458499999999999e-86 874030000.0 475430.0 455670.0 275113.0 567350.0 346060.0 350580.0 380480.0 464120.0 340750.0 288189.0 False True 449056.95015379164 433778.9292253859 292847.2241763638 621270.7734200023 373292.9531879431 348391.90017895174 418942.63152695855 462510.0760464222 278878.38960847515 285635.86966764927 1.5721308065275221 1.5186430532345536 1.0252466698846516 2.1750446613826195 1.3068840185313104 1.2197064065669414 1.4667017556808182 1.6192296737261127 0.9763423267986728 1.0 18.12381763637464 -7.7705928435583935 24.95438868620948 0.9881707004680845 1.480766258236065 0.32816081978021394 0.28589156866775517 247.3979663524017 674436.7372534861 0.2568133318956908 0.07005323041156504 1.695927007899743e-08 7.7705928435583935 0.4925955577679805 QQGDHSLKEHELLEQQKR ddPTM_KYSE-520_SHP099_60min_R1 3 QQGDHSLKEHELLEQQKR 18 2 Q13435;H0YCG1 Q13435 SF3B2 Splicing factor 3B subunit 2 0 ;; 172.97 6.5414e-09 3529360000.0 1177730.0 1361080.0 1166620.0 1083000.0 1033510.0 1018430.0 765880.0 986140.0 1504410.0 701143.0 False True 1112398.969153452 1295691.6737772678 1241822.1918579976 1185927.9943841763 1114841.3571324956 1012073.6006025722 843302.6246684912 982719.310506806 1231247.067089907 694931.4185009991 1.6007320140352133 1.864488551362576 1.7869708561122024 1.7065396135668764 1.6042465881557963 1.4563647198246759 1.213504818198515 1.4141241629664398 1.7717533476120086 1.0 19.406511082387265 -6.081209494371262 1.9524031321007447 1.380792586214984 1.7561468482894536 0.4570269658669426 0.19166365136072616 0.32299383545815963 2.449098216330886 0.0720694917509852 0.07482619961924752 8.294505617825299e-07 6.081209494371262 0.37535426207446965 QQGHEPVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 QQGHEPVSPR 10 0 Q9BTA9-2;Q9BTA9;A0A0A0MRT2;Q9BTA9-5 Q9BTA9-2 WAC WW domain-containing adapter protein with coiled-coil 1 QQGHEPVS(1)PR;QQGHEPVS(1)PR;QQGHEPVS(1)PR;QQGHEPVS(1)PR;QQGHEPVS(1)PR;QQGHEPVS(1)PR;QQGHEPVS(1)PR;QQGHEPVS(1)PR 108.5 0.00084753 7805610000.0 9725590.0 9830810.0 8674000.0 7635130.0 7850270.0 8823340.0 7820230.0 8558300.0 10644140.0 8750590.0 True False 9186092.135216989 9358523.131253341 9233139.918890702 8360770.459614463 8468041.587073669 8768270.262208203 8610775.166489879 8528613.25482223 8711432.492933687 8673066.580456013 1.0591515757433516 1.0790327785955136 1.0645761603740902 0.9639924220638083 0.9763607264535072 1.0109769342676007 0.99281783284052 0.983344607781601 1.0044235694632078 1.0 23.04811075402748 -5.246732684344401 23.804882090896584 0.9899686843179224 1.0687314567688306 0.8698155599893158 0.0137040664628847 140.46308525752855 227358.67778986087 0.0038297029640453764 0.006590897275698934 5.6658792625653985e-06 5.246732684344401 0.07876277245090824 QQGSSLSGS(ph)KDNVELILK ddPTM_KYSE-520_SHP099_60min_R1 1 QQGSSLSGSKDNVELILK 18 1 Q14161-6;Q14161-3;Q14161;R4GNG3;F8VXI9;Q14161-11;Q14161-7;Q14161-4;Q14161-5;F8WAK2;Q14161-2;Q14161-10;Q14161-8;F8W822 Q14161-6 GIT2 ARF GTPase-activating protein GIT2 1 QQGS(0.002)S(0.006)LS(0.203)GS(0.789)KDNVELILK 146.99 3.018e-06 88782000.0 83001.0 87057.0 84498.0 84892.0 77187.0 93227.0 74887.0 99349.0 103000.0 95828.0 True False 78396.76907160864 82874.65104477888 89944.87628158015 92960.1101562896 83261.1777660458 92645.1357122003 82457.30878668882 99004.3815072308 84297.79641870264 94979.03847305576 0.8254112731815949 0.8725572755539031 0.9469971240769748 0.978743432769759 0.8766268758307745 0.9754271805824023 0.8681632296170363 1.0423813832913984 0.8875410593108579 1.0 16.535321530595397 -4.60204938359316 2.973084798336809 0.9455570875772117 0.8303419624956553 0.36371924742241246 0.05345197397289155 0.26553355696705383 4.471294066259268 0.013081011069869385 0.04982256781492899 2.500061063775811e-05 4.60204938359316 -0.1152151250815564 QQLREITEKT(ph)S(ph)KNK ddPTM_KYSE-520_SHP099_60min_R1 1 QQLREITEKTSKNK 14 3 Q5KU26 Q5KU26 COLEC12 Collectin-12 2 QQLREIT(0.443)EKT(0.626)S(0.931)KNK 43.794 0.057775 2427500000.0 1474100.0 1031500.0 1182600.0 363940.0 1117600.0 1269900.0 1142800.0 1320700.0 1433300.0 1263500.0 True False 1392328.7344545024 981945.1916869342 1258832.2882269023 398528.7481774488 1205548.7617258432 1261974.0830545134 1258325.3766531993 1316118.7999536968 1173048.8505526856 1252306.3729881244 1.1118115857961108 0.7841093943680234 1.0052111171671245 0.3182358221387316 0.9626628017944898 1.0077199240337018 1.0048063347715088 1.0509559228811636 0.9367107569321693 1.0 20.256156125779125 -5.974642294522382 24.9999413819729 1.001485005618752 0.7955202633811606 0.1859789580749477 0.19458578730942022 369.22365823219366 364012.62684064166 0.060073316963701044 0.06811469383991302 1.0601265360433327e-06 5.974642294522382 -0.20596474223759154 QQLS(ph)PDRQPQSSGPDR ddPTM_KYSE-520_SHP099_60min_R1 1 QQLSPDRQPQSSGPDR 16 1 Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;A0A1B0GUA8;Q9H1H9;H0Y307 Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 QQLS(1)PDRQPQSSGPDR 158.52 1.0673e-07 929190000.0 207720.0 179240.0 162020.0 156860.0 169820.0 228730.0 171350.0 188090.0 230330.0 144790.0 True False 196197.35752044604 170629.04135527503 172464.06844116555 171767.92723832125 183183.86785637328 227302.41122691435 188671.73021484533 187437.55969053583 188507.87814679396 143507.27324491527 1.3671596782806106 1.1889922893599452 1.2017792864535266 1.196928374112267 1.276477935329064 1.5839086485811136 1.3147189403623507 1.306118884794413 1.3135771719742653 1.0 17.130764331954225 -10.11871418314008 4.419670067201406 0.9999627700912057 1.30346788197167 0.4148000333876295 0.10884109338407355 80136791.8819894 2.2712109795539472 31517.74286303355 0.028622151373143917 7.608268257678762e-11 10.11871418314008 0.30350511188046436 QQMQDFFLAHKDEEWFR ddPTM_KYSE-520_SHP099_60min_R1 2 QQMQDFFLAHKDEEWFR 17 1 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 0 ; 181.41 3.6638000000000005e-09 286594000.0 735070.0 533353.0 407982.0 427516.0 692080.0 579380.0 480066.0 465637.0 430714.0 368745.0 False True 694294.2017742845 507729.9213008259 434281.1725142801 468146.9921026278 746542.7586034564 575763.874509902 528595.7562726582 464021.813927493 352507.1950163605 365478.2061792689 1.899687012893266 1.3892207872219386 1.1882546350828453 1.280916301403207 2.0426464450722226 1.5753712937605011 1.4463126592379612 1.269629231188379 0.9645094811575549 1.0 18.479425853871636 -7.48254983285564 1.9930734726142931 0.9731270186649607 1.5425177969658546 0.4609064748751176 0.24583475988179251 0.3493083445940906 2.514924445730676 0.22199873816048796 0.07461478035405507 3.291926781529786e-08 7.48254983285564 0.5693907783008939 QQNAS(ph)ESKLELR ddPTM_KYSE-520_SHP099_60min_R1 1 QQNASESKLELR 12 1 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 QQNAS(0.998)ES(0.002)KLELR 73.834 0.023053 0.0 170170.0 201540.0 168470.0 155060.0 172390.0 175820.0 162910.0 170950.0 215470.0 169140.0 True False 160730.330874515 191857.7158822926 179329.84576153048 169796.85577951095 185956.11223507367 174722.6421628826 179378.53264838355 170357.01435003005 176346.0795566781 167641.55118892863 0.9587738226865676 1.144452043789984 1.0697219423806774 1.0128566251940327 1.1092483391871322 1.042239474186049 1.0700123649310997 1.0161980317042112 1.051923453976751 1.0 17.355020250351203 -8.007043876432082 0.7408922484786065 1.0014753918120967 1.0622659372667924 0.09763493774481191 0.04896417237307923 1.5623314786866163 1.9687928720040686 0.04548383211705967 0.017560342608239486 9.839116969098607e-09 8.007043876432082 0.060790545454695755 QQPPEPEWIGDGES(ph)TSPSDKVVK ddPTM_KYSE-520_SHP099_60min_R1 1 QQPPEPEWIGDGESTSPSDKVVK 23 1 Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 QQPPEPEWIGDGES(0.327)T(0.327)S(0.327)PS(0.018)DKVVK 73.655 0.0096093 4158100000.0 141740.0 251160.0 202750.0 169980.0 161820.0 142730.0 106020.0 185300.0 233010.0 160500.0 True False 133877.39964831495 239093.89660115418 215819.58941146967 186134.8480936493 174554.3133701469 141839.16912699462 116737.53625548835 184657.2375493452 190701.25770409606 159078.09486711043 0.8415828701000759 1.5029969827139733 1.3566895529630247 1.1700847200184372 1.0972869238594094 0.8916323095614342 0.7338379074316156 1.1607961341478406 1.1987901782668617 1.0 17.279375663956653 -5.794414066120826 2.632433757721656 0.9923521064038688 1.2575862666508824 0.20829840591347604 0.19910474302520856 0.39739555869535836 5.635955687795575 0.06735388430554273 0.08316100531868702 1.6054098892368352e-06 5.794414066120826 0.2652341602470135 QQPPEPEWIGDGESTS(ph)PSDKVVK ddPTM_KYSE-520_SHP099_60min_R1 6 QQPPEPEWIGDGESTSPSDKVVK 23 1 Q5STZ8;Q8NE71;Q8NE71-2;A0A0G2JIC2 Q5STZ8 ABCF1 ATP-binding cassette sub-family F member 1 1 QQPPEPEWIGDGES(0.295)T(0.295)S(0.308)PS(0.102)DKVVK;QQPPEPEWIGDGES(0.111)T(0.111)S(0.762)PS(0.017)DKVVK;QQPPEPEWIGDGEST(0.163)S(0.836)PSDKVVK;QQPPEPEWIGDGES(0.006)T(0.11)S(0.863)PS(0.021)DKVVK;QQPPEPEWIGDGES(0.002)T(0.039)S(0.949)PS(0.01)DKVVK;QQPPEPEWIGDGES(0.007)T(0.152)S(0.837)PS(0.004)DKVVK 230.85 3.9889999999999995e-22 10281610000.0 3659230.0 4150360.0 3652460.0 2667750.0 2640660.0 3055560.0 2533070.0 2905730.0 4383850.0 3138740.0 True False 3456245.217405844 3950970.475782629 3887903.415742627 2921292.1579117174 2848464.9186998624 3036489.116637564 2789137.4359808476 2895650.7008324773 3587853.3478653315 3110933.205502772 1.1109994940721541 1.2700274209661455 1.249754706679498 0.9390404630817505 0.9156303689392487 0.9760701744629143 0.8965597303880662 0.9307980948322863 1.1533045266028084 1.0 21.56891598858592 -5.262522493424942 24.999903932224235 0.9647195132086962 1.2162372384037838 0.6587706539157184 0.07803539563598531 54.406776644873325 1255804.482746616 0.021632567255235286 0.03427460211545294 5.4635825160247e-06 5.262522493424942 0.25151772519508764 QQPPLGPS(ph)SSLLSLPGLK ddPTM_KYSE-520_SHP099_60min_R1 1 QQPPLGPSSSLLSLPGLK 18 0 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 QQPPLGPS(0.597)S(0.191)S(0.191)LLS(0.02)LPGLK 77.13 0.0058077 14537000.0 45871.0 54789.0 48661.0 41470.0 46576.0 55873.0 35761.0 58620.0 62016.0 54520.0 True False 43326.444188428555 52156.8542000344 51797.76592035286 45411.296331589845 50241.26621881073 55524.27588196296 39376.07087372682 58416.660902010866 50755.457696138445 54036.99521591816 0.8017922539050708 0.9652064107493173 0.9585611804168994 0.8403741945705492 0.9297568456213995 1.0275233783836795 0.7286872764925215 1.0810493934496666 0.9392723909486913 1.0 15.721659833864836 -1.0000090499625456 0.05043353519790506 1.1643923283960946 0.4889320415014889 0.11904063686854327 0.09585050677356917 1160.1344583996427 4.424649160413464 13.874689531735351 60.846412675120696 0.09999791619082664 1.0000090499625456 -0.6754602868946058 QQPPLGPSSS(ph)LLS(ph)LPGLK ddPTM_KYSE-520_SHP099_60min_R1 1 QQPPLGPSSSLLSLPGLK 18 0 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 2 QQPPLGPS(0.367)S(0.412)S(0.443)LLS(0.778)LPGLK 73.464 0.010221 0.0 51428.0 42219.0 47059.0 48492.0 40166.0 44793.0 40483.0 55459.0 69511.0 59713.0 True False 48575.186320823675 40190.735867989024 50092.49843706222 53100.665100348604 43326.83568672178 44513.43027188031 44575.41671600577 55266.62567322789 56889.554629713064 59183.98927601104 0.820748768628758 0.6790812238180686 0.8463859744812122 0.8972133468852161 0.7320702138658197 0.7521194636658748 0.7531668152365231 0.9338104164537796 0.961232173187961 1.0 15.852919323711332 -7.3670593794434165 4.102155368422827 0.9712676216372556 0.7827514915003997 0.6681479592791171 0.05917817206008167 0.15225737321592075 4.413433862651483 0.037404428622517596 0.016690909926299947 4.294777018870771e-08 7.3670593794434165 -0.18851613013685586 QQPPLGPSSS(ph)LLSLPGLK ddPTM_KYSE-520_SHP099_60min_R1 4 QQPPLGPSSSLLSLPGLK 18 0 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 QQPPLGPS(0.052)S(0.198)S(0.75)LLSLPGLK;QQPPLGPS(0.055)S(0.178)S(0.754)LLS(0.014)LPGLK;QQPPLGPS(0.043)S(0.183)S(0.773)LLSLPGLK;QQPPLGPS(0.001)S(0.29)S(0.709)LLSLPGLK 226.22 3.7136999999999996e-20 6306540000.0 1144530.0 1469930.0 1179500.0 972620.0 1000150.0 1428250.0 1179850.0 1490150.0 1562690.0 1585790.0 True False 1081040.63933601 1399312.3563900895 1255532.4572667277 1065057.5123711354 1078856.1149249298 1419335.7619675626 1299120.752226354 1484981.0174536237 1278944.8882091504 1571741.1343259525 0.6877981467346521 0.8902944167012529 0.7988163125890115 0.6776290886017242 0.686408271288008 0.9030340499272168 0.8265488023786355 0.9447999960187233 0.8137121694391686 1.0 20.583932194695958 -6.276724749615505 24.760422285381484 0.8897271264370936 0.7549765845423579 0.4771749214027422 0.07782673723925196 735.0687602061873 1190717.579902195 0.027815248469326807 0.02462280891259773 5.287802798914398e-07 6.276724749615505 -0.13475054189473568 QQQEPTGEPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 QQQEPTGEPSPK 12 0 P52926;F5H2U8;F5H2A4;F5H6H0;P52926-3;P52926-6;P52926-4;P52926-5;P52926-2 P52926 HMGA2 High mobility group protein HMGI-C 1 QQQEPTGEPS(1)PK;QQQEPTGEPS(1)PK;QQQEPTGEPS(1)PK;QQQEPTGEPS(1)PK;QQQEPTGEPS(1)PK;QQQEPTGEPS(1)PK 241.76 2.3226e-15 5222700000.0 5699220.0 5981150.0 4662440.0 4051040.0 4344370.0 5465050.0 4967520.0 6427910.0 6308660.0 6092290.0 True False 5383072.905486597 5693806.576110812 4962988.342567765 4436049.623610409 4686247.2029159805 5430940.595792631 5469685.399923247 6405613.080495468 5163166.372376817 6038317.050329897 0.8914856342617019 0.9429459448141659 0.8219158254197033 0.7346500004281906 0.7760849859084415 0.8994129573729351 0.9058294478963169 1.0608275496473814 0.855067120414741 1.0 22.52571507889682 -6.738811482395621 2.402126948423193 0.9678049750485938 0.8347981594343467 0.3818237287189281 0.07349525639702344 0.3260174430002361 3.8472107366685795 0.03643572471046723 0.02450350586811228 1.824687586857564e-07 6.738811482395621 -0.1330068156142471 QQQLEEEAAKPPEPEKPVS(ph)PPPIESK ddPTM_KYSE-520_SHP099_60min_R1 4 QQQLEEEAAKPPEPEKPVSPPPIESK 26 2 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J330;H7C1Y3;H0YGK8 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 QQQLEEEAAKPPEPEKPVS(0.973)PPPIES(0.027)K;QQQLEEEAAKPPEPEKPVS(1)PPPIESK;QQQLEEEAAKPPEPEKPVS(1)PPPIESK;QQQLEEEAAKPPEPEKPVS(1)PPPIESK 129.9 5.1188e-05 11056930000.0 5357200.0 5150500.0 3939260.0 3118300.0 3519630.0 4870700.0 4094230.0 5062400.0 5871500.0 4916300.0 True False 5060025.436686561 4903062.2489418825 4193191.002638855 3414662.2944489177 3796604.8570446735 4840300.154605568 4508114.724234184 5044839.715973044 4805383.608470026 4872745.406823518 1.0384341914520687 1.00622171683255 0.8605397271047543 0.7007676390535851 0.7791510822067828 0.9933414842128803 0.9251693548202364 1.0353177305156422 0.9861758017853423 1.0 22.216303415308452 -6.298201400820511 24.332154457314427 0.9862813036754369 0.8734928803738713 0.2542162226375009 0.09492210288072396 705.3663602773629 466867.49892666127 0.038286171363963374 0.033766358433350394 5.032671682755571e-07 6.298201400820511 -0.11278842330156558 QQQLEEEAAKPPEPEKPVS(ph)PPPVEQK ddPTM_KYSE-520_SHP099_60min_R1 8 QQQLEEEAAKPPEPEKPVSPPPVEQK 26 2 A0A088AWL3;O75376-2;O75376;O75376-3;E7EVU5;E7EW50;J3KS51 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 QQQLEEEAAKPPEPEKPVS(1)PPPVEQK;QQQLEEEAAKPPEPEKPVS(1)PPPVEQK;QQQLEEEAAKPPEPEKPVS(1)PPPVEQK;QQQLEEEAAKPPEPEKPVS(1)PPPVEQK;QQQLEEEAAKPPEPEKPVS(1)PPPVEQK;QQQLEEEAAKPPEPEKPVS(1)PPPVEQK;QQQLEEEAAKPPEPEKPVS(1)PPPVEQK;QQQLEEEAAKPPEPEKPVS(1)PPPVEQK 243.73 2.6479e-29 27676990000.0 11168070.0 11163280.0 8652320.0 7389700.0 8122200.0 10956560.0 8620680.0 11404640.0 12857140.0 11641490.0 True False 10548554.894104404 10626979.272375105 9210062.391401485 8092014.866205678 8761370.931003628 10888176.044910436 9492142.46412907 11365079.96570298 10522607.47812386 11538355.455542179 0.9142164959944663 0.9210133379337594 0.7982127459054529 0.7013144028526932 0.7593257951500626 0.9436505996771452 0.8226599103054796 0.9849826528133202 0.9119676992677126 1.0 23.459934277691843 -7.258244647897197 24.74834123836829 0.9613563861913126 0.834796025535412 0.38549889313850116 0.07421580020574303 285.5451472374952 2212030.470558811 0.040385680038559225 0.022048578890381067 5.517665291612139e-08 7.258244647897197 -0.1265603606559006 QQQQQQQHQQPNR ddPTM_KYSE-520_SHP099_60min_R1 1 QQQQQQQHQQPNR 13 0 I1E4Y6;Q6Y7W6;Q6Y7W6-3;C9JH18;Q6Y7W6-4;Q6Y7W6-5 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 0 104.87 0.001325 45365000.0 2584.7 2641.2 1883.2 2980.3 2001.6 2665.2 2021.5 1693.1 1787.8 2497.8 False True 2441.3215385282915 2514.3127874779743 2004.5940852265348 3263.54681594013 2159.114532453873 2648.5654981942557 2225.8529479387807 1687.22703127251 1463.180586770452 2475.6714352589943 0.9861250179480666 1.0156084331986233 0.8097173383659543 1.3182471508375713 0.8721329097647385 1.0698372411107833 0.8990906128485994 0.6815230031104671 0.5910237384216457 1.0 11.273604141146276 -7.058237549059716 3.9102825495471563 0.7302409198987282 1.0098401426490373 0.3339615587460928 0.1592495989647225 0.23767711519706974 7.253592174747276 0.07496105678273052 0.04282176284773192 8.745053101603293e-08 7.058237549059716 0.27959922275030913 QQQS(ph)PPKGK ddPTM_KYSE-520_SHP099_60min_R1 4 QQQSPPKGK 9 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 QQQS(1)PPKGK;QQQS(1)PPKGK;QQQS(1)PPKGK;QQQS(1)PPKGK 150.46 0.00042339 3163970000.0 3846710.0 3140690.0 2921100.0 2667470.0 2845120.0 3362150.0 3288890.0 2754670.0 4006420.0 3453780.0 True False 3633325.328073732 2989806.5381281967 3109398.779925252 2920985.5467959014 3069014.7574815997 3341165.5747237806 3621363.0976731987 2745114.692714812 3278955.1216293075 3423182.1962001827 1.0613882404818573 0.8733997686266761 0.9083357536086633 0.8532953782121991 0.896538536829352 0.976040824947196 1.0578937637888517 0.8019189559240981 0.9578675436174648 1.0 21.706906650032796 -6.254257095051056 24.508116418058165 0.9525609990250657 0.9118835521707607 0.05335318593598759 0.08008197180964002 1501.402484559075 5123236.315788486 0.02700836272920655 0.02648297812606066 5.568560019234082e-07 6.254257095051056 -0.04067744685430508 QQS(ph)IEDKEDKPPPR ddPTM_KYSE-520_SHP099_60min_R1 3 QQSIEDKEDKPPPR 14 2 Q5JSZ5;Q5JSZ5-5;Q5JT00 Q5JSZ5 PRRC2B Protein PRRC2B 1 QQS(1)IEDKEDKPPPR;QQS(1)IEDKEDKPPPR;QQS(1)IEDKEDKPPPR 95.48 0.0014413 2430800000.0 1341160.0 1299230.0 1285950.0 1216200.0 1255660.0 1421410.0 1362530.0 1441170.0 1629330.0 1324150.0 True False 1266763.1812638235 1236813.040616012 1368844.3945927485 1331787.2823361363 1354473.2982718989 1412538.4529447334 1500267.8294113404 1436170.9176416064 1333484.744066842 1312419.0611731121 0.9652124224190413 0.9423918603486913 1.042993381526477 1.0147576500037356 1.0320432995397038 1.0762861457392496 1.1431316976380386 1.0942929435647468 1.016051033939495 1.0 20.32379702170691 -5.052537864157424 0.9074899399646862 1.0723814986322815 0.9397999229841402 0.44152895058888997 0.04252020226708579 0.7498010657864589 0.9971664468282782 0.017505549640193938 0.07819275569258165 8.86057968933981e-06 5.052537864157424 -0.13258157564814133 QQS(ph)LPLRPIIPLVAR ddPTM_KYSE-520_SHP099_60min_R1 1 QQSLPLRPIIPLVAR 15 1 Q9NU19 Q9NU19 TBC1D22B TBC1 domain family member 22B 1 QQS(1)LPLRPIIPLVAR 59.9 0.023857 212090000.0 324090.0 327710.0 349290.0 195160.0 401060.0 283280.0 300560.0 381020.0 460230.0 320840.0 True False 306112.0816426019 311966.31969726156 371805.7922837599 213707.94772300625 432621.1402807501 281511.9444426197 330943.5379829239 379698.3305507363 376663.8334541701 317997.60720974277 0.9626238521999271 0.981033544354618 1.169209402379329 0.6720426282391809 1.3604540740943523 0.8852643480959965 1.040710780457673 1.1940288918598603 1.184486376357331 1.0 18.278656384350136 -7.1070436330523545 5.9253354771454125 1.140306033937579 1.0087198704510731 0.08542949466026173 0.1748123569033337 0.5438298211860806 25.473616994041638 0.07883902681233887 0.045157020031548735 7.815492793130545e-08 7.1070436330523545 -0.13158616348650587 QQS(ph)PQEPK ddPTM_KYSE-520_SHP099_60min_R1 12 QQSPQEPK 8 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 QQS(1)PQEPK;QQS(1)PQEPK;QQS(1)PQEPK;QQS(1)PQEPK;QQS(1)PQEPK;QQS(1)PQEPK;QQS(1)PQEPK;QQS(1)PQEPK;QQS(1)PQEPK;QQS(1)PQEPK;QQS(1)PQEPK;QQS(1)PQEPK 187.16 6.8712e-06 103964680000.0 76134400.0 69363580.0 66490610.0 58047860.0 60149240.0 68474420.0 68579670.0 64329390.0 80741100.0 68900470.0 True False 71911073.06183638 66031249.49994384 70776701.1093374 63564711.16167449 64882642.98563946 68047045.74548364 75512372.31668018 64106246.36068256 66080551.55749628 68290065.43955456 1.0530239296005197 0.9669232131339798 1.0364128464920543 0.9308046602757672 0.9501036873814229 0.9964413609431079 1.1057592613308929 0.9387345867668672 0.9676451637901273 1.0 26.025172380595755 -6.518300477504757 24.951449036931987 1.0055251422277403 0.9846245361251024 0.0169594132115658 0.05266439773011603 900.1816992487827 4906048.217423389 0.02035994756322907 0.01617804963066951 3.0317928366415566e-07 6.518300477504757 -0.020900606102637886 QQSHFAMMHGGTGFAGIDS(ph)SSPEVK ddPTM_KYSE-520_SHP099_60min_R1 2 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGTGFAGIDS(0.333)S(0.333)S(0.333)PEVK;QQSHFAMMHGGTGFAGIDS(0.333)S(0.333)S(0.333)PEVK 193.94 3.0538e-15 1484350000.0 503480.0 614100.0 750380.0 897300.0 634290.0 537460.0 596410.0 584390.0 808380.0 579000.0 True False 475550.96073750325 584597.714217107 798750.6954504508 982579.1222169179 684205.0143835763 534105.512779336 656700.9432006768 582362.887487652 661598.5696014637 573870.5104551833 0.8286729359212153 1.0186927252167306 1.3918657273692225 1.7121965745156595 1.1922637631978645 0.9307073687332242 1.1443364508829594 1.014798420336554 1.1528708263414618 1.0 19.130365714823586 -6.0119984359303595 24.957609025610427 1.056124713016154 1.2605813752676103 0.13771002085186546 0.2244939566150174 1224.850866011509 2547780.3815028975 0.07958368070477875 0.08389553710552665 9.7275072703847e-07 6.0119984359303595 0.2044566622514563 QQSHFAMMHGGTGFAGIDSS(ph)SPEVK ddPTM_KYSE-520_SHP099_60min_R1 1 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGTGFAGIDS(0.075)S(0.555)S(0.37)PEVK 66.825 0.011127 432970000.0 130110.0 148840.0 206140.0 161640.0 141910.0 116260.0 129930.0 107320.0 189820.0 126560.0 True False 122892.53893214524 141689.50298660528 219428.1142356617 177002.21700116195 153077.50964255055 115534.37821554278 143064.59239460088 106947.7319686763 155353.4729727973 125438.77686219013 0.9797013491861273 1.1295510569452423 1.7492845492006859 1.4110645960429011 1.2203364340097556 0.921041970478327 1.1405132924069792 0.852589084842333 1.2384804512521046 1.0 16.93662387153242 -6.049252680365441 4.94676623652459 1.0297638532264843 1.3337872909014292 0.2930198086227863 0.21119932525289975 0.27354309838880736 14.964642204964827 0.07367342095446341 0.07579366648000753 8.927858936532639e-07 6.049252680365441 0.3040234376749449 QQSHFAMMHGGTGFAGIDSSS(ph)PEVK ddPTM_KYSE-520_SHP099_60min_R1 5 QQSHFAMMHGGTGFAGIDSSSPEVK 25 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 QQSHFAMMHGGTGFAGIDSS(0.048)S(0.952)PEVK;QQSHFAMMHGGTGFAGIDS(0.151)S(0.151)S(0.699)PEVK;QQSHFAMMHGGTGFAGIDS(0.059)S(0.036)S(0.905)PEVK;QQSHFAMMHGGT(0.001)GFAGIDS(0.011)S(0.237)S(0.751)PEVK;QQSHFAMMHGGTGFAGIDS(0.003)S(0.159)S(0.838)PEVK 255.04 8.8145e-30 6387247000.0 2114597.0 2305570.0 2177730.0 2960803.0 2511232.0 2090134.0 2288171.0 2033375.0 2704870.0 1998775.0 True False 1997296.0890653862 2194806.956468874 2318109.960291197 3242196.8269221187 2708851.671444447 2077088.6984101587 2519481.6550769387 2026321.6967182942 2213733.7922238456 1981067.4085234173 1.0081918870968984 1.1078911030618424 1.17013179375809 1.6365908666069473 1.3673697622755205 1.048469471292908 1.271779871920071 1.0228433863482753 1.1174449605800367 1.0 20.917846540055308 -7.203773302682352 1.340307202356199 1.0343413836237347 1.247997939250825 0.17330003974822517 0.17368204832900302 0.8914304067167191 2.876787758636606 0.1546175977527615 0.06168470383494675 6.254991117710049e-08 7.203773302682352 0.21365655562709018 QQSLPSLCSTSDPDTPLGAPSTPGRIS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 QQSLPSLCSTSDPDTPLGAPSTPGRISLR 29 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 QQSLPSLCSTSDPDTPLGAPSTPGRIS(1)LR 164.83 3.1020999999999996e-10 719420000.0 32670.0 18335.0 23717.0 21410.0 36253.0 96537.0 87932.0 131030.0 154210.0 109660.0 True False 30857.729973969606 17454.159078603923 25245.83576854171 23444.799962848774 39105.90484864622 95934.47677441806 96821.02469362013 130575.48751263181 126209.35131774875 108688.49771418906 0.2839098029960276 0.16058883364550652 0.23227697778038126 0.21570635767273197 0.35979800688275615 0.8826552836040719 0.8908120613482391 1.2013735607607487 1.1612024636648592 1.0 16.729839745356426 -6.351102684415126 1.5246288781296853 1.1091931920580824 0.2050145797642924 0.959583414814048 0.08090601567202138 0.06871559801349586 0.3192646690659914 0.03716470203132745 0.03141458705343837 4.4555089006674314e-07 6.351102684415126 -0.90417861229379 down QQSNEHLR ddPTM_KYSE-520_SHP099_60min_R1 3 QQSNEHLR 8 0 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ;; 158.76 0.00040548 866372000.0 278931.0 372051.0 265684.0 447603.0 304445.0 357400.0 252307.0 265072.0 275642.0 289618.0 False True 263458.14139483706 354177.11150006345 282810.41574943025 490143.05454325065 328403.0894449042 355169.3340292016 277812.6538390253 264152.5271002698 225592.36116935973 287052.2098393947 0.9178056547352187 1.2338421351928452 0.985222917836662 1.7075048989084074 1.1440535142671266 1.237298727739871 0.9678122805410941 0.9202246770650633 0.785893135243858 1.0 18.130953636515475 -6.854870735491262 3.534032963041908 0.8968230534054992 1.2169530809558822 0.3222720696270257 0.2035898682353484 0.2817876865845149 6.848347155789993 0.09178013758124975 0.06019105159436478 1.3967840415279797e-07 6.854870735491262 0.320130027550383 QQSNEHLRR ddPTM_KYSE-520_SHP099_60min_R1 1 QQSNEHLRR 9 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 99.01299999999999 0.0065490999999999995 75316000.0 15707.0 21862.0 16279.0 22252.0 14408.0 14217.0 8923.4 8629.9 16791.0 10158.0 False True 14835.701398871768 20811.716704468985 17328.370387320934 24366.82338969224 15541.827629693957 14128.266429471612 9825.464355991558 8599.9648911338 13742.177666664425 10068.008022804413 1.4735488256731968 2.067113639294851 1.7211319605697104 2.420222881676343 1.543684470104825 1.4032831914188548 0.9759094682618961 0.8541873299717838 1.3649351128383966 1.0 13.297490650789062 -6.307663780061831 2.0992065753930933 1.0478395956998388 1.9120008855176391 0.6605465683845314 0.27241627645403577 0.18792915098374746 1.6266024817416314 0.10684607985236647 0.09520729890115882 4.924206078869026e-07 6.307663780061831 0.8641612898178004 QQSSSSKGDS(ph)PELKPR ddPTM_KYSE-520_SHP099_60min_R1 5 QQSSSSKGDSPELKPR 16 2 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 QQS(0.024)S(0.015)S(0.006)S(0.004)KGDS(0.95)PELKPR;QQSS(0.001)S(0.001)S(0.016)KGDS(0.982)PELKPR;QQSS(0.001)SS(0.002)KGDS(0.997)PELKPR;QQSSSS(0.007)KGDS(0.992)PELKPR;QQS(0.001)S(0.001)SS(0.001)KGDS(0.997)PELKPR 172.24 1.9976e-08 11408830000.0 14650360.0 13063460.0 12369340.0 10885500.0 11123970.0 10305550.0 9064030.0 8468090.0 12638960.0 8453450.0 True False 13837675.326031396 12435871.772946794 13166687.448043756 11920054.647155095 11999363.152268654 10241229.239800334 9980310.608808082 8438716.172257071 10344043.466253644 8378559.009684579 1.6515579003545542 1.4842494704128075 1.5714739769481472 1.4226855278308577 1.4321511775949625 1.2223139119701536 1.1911726822323594 1.007179893643162 1.2345850228299649 1.0 22.998270712014566 -6.20618194550502 0.7006161952338651 1.054301177017952 1.597529090898399 0.8755288841963371 0.07541531698255115 0.22427534039311492 0.24276982351886955 0.05155488401116968 0.05554392473686937 6.220396301753286e-07 6.20618194550502 0.543227913880447 QQSSSSRES(ph)PVPK ddPTM_KYSE-520_SHP099_60min_R1 5 QQSSSSRESPVPK 13 1 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 QQSSS(0.025)S(0.01)RES(0.964)PVPK;QQSSSSRES(1)PVPK;QQS(0.001)S(0.01)S(0.032)S(0.03)RES(0.927)PVPK;QQSSSSRES(1)PVPK;QQSSSSRES(1)PVPK 215.98 4.4323e-11 6631780000.0 9255870.0 8545940.0 8063190.0 6934370.0 6976570.0 7335810.0 6584530.0 6670740.0 8692790.0 6679380.0 True False 8742428.4399806 8135380.214682542 8582956.128960159 7593410.439905641 7525586.367746663 7290024.488709447 7250158.551220066 6647600.759902419 7114398.463403243 6620205.889679008 1.320567454497173 1.2288711786691877 1.2964787307206118 1.1470051787579405 1.136760169268928 1.101177910504973 1.0951560528537583 1.0041380692201913 1.0746491245075456 1.0 22.65844465514819 -5.431755225341507 0.43880665239786276 1.0085352165623835 1.3760205287959302 0.8933053307874311 0.034397208117480295 0.5812203912484143 0.17712320358981617 0.02898545007707939 0.10145861839389406 3.700366790485081e-06 5.431755225341507 0.36748531223354663 QQSTSSDRVS(ph)QTPESLDFLK ddPTM_KYSE-520_SHP099_60min_R1 1 QQSTSSDRVSQTPESLDFLK 20 1 Q12965 Q12965 MYO1E Unconventional myosin-Ie 1 QQS(0.176)T(0.138)S(0.108)S(0.108)DRVS(0.468)QT(0.001)PESLDFLK 66.3 0.011795 442090000.0 60139.0 66354.0 86878.0 62258.0 73488.0 64445.0 65432.0 80709.0 78913.0 100800.0 True False 56802.9697858757 63166.2542406154 92478.29488971473 68174.98160144985 79271.08751047675 64042.774850341055 72046.50511478116 80429.03931662225 64584.38843484544 99906.99042121331 0.5685585117356782 0.6322505960223908 0.9256438863769312 0.6823844989626894 0.7934488585459889 0.6410239621905658 0.7211357764960107 0.8050391566949323 0.6464451402504884 1.0 16.608298005446905 -11.26918241512095 2.247804819829593 2.1316078943599397 0.7190799358449426 0.42847147953935827 0.09924906158602892 11141191.353800783 2091517.2954732885 63792844.6311006 0.02572621629732953 5.3804374250525726e-12 11.26918241512095 -1.412527958514997 QQTEKPES(ph)EDEWER ddPTM_KYSE-520_SHP099_60min_R1 9 QQTEKPESEDEWER 14 1 A2AB15;A0A140T947;O60231 A2AB15 DHX16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 1 QQT(0.001)EKPES(0.999)EDEWER;QQT(0.036)EKPES(0.964)EDEWER;QQTEKPES(1)EDEWER;QQTEKPES(1)EDEWER;QQTEKPES(1)EDEWER;QQTEKPES(1)EDEWER;QQTEKPES(1)EDEWER;QQT(0.025)EKPES(0.975)EDEWER;QQT(0.083)EKPES(0.917)EDEWER 215.15 1.2622000000000002e-13 12634210000.0 19283960.0 18050760.0 17491860.0 16514620.0 17986940.0 17952640.0 17318800.0 17767120.0 21329580.0 18770570.0 True False 18214240.297178783 17183574.394856855 18619413.283565562 18084164.519498467 19402409.846310887 17840590.914566338 19069553.31919968 17705490.007596973 17456665.946955636 18604277.3530825 0.9790350870124448 0.9236356816627306 1.0008135726099865 0.9720433734827192 1.0429004834792008 0.9589510291626765 1.0250090856681455 0.9516892095066187 0.938314647521812 1.0 24.14913101708468 -2.504261680217743 9.781051232143081 0.9792283040525298 0.9377206395814576 0.0 0.03610139982034464 0.0 0.0 0.008174150278934384 0.0 0.0031313983599649217 2.504261680217743 -0.041507664471072236 QQVSWEQEFLVGS(ph)SPGGSGR ddPTM_KYSE-520_SHP099_60min_R1 1 QQVSWEQEFLVGSSPGGSGR 20 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 QQVSWEQEFLVGS(0.5)S(0.5)PGGS(0.001)GR 100.35 0.00084237 11700000.0 22060.0 22643.0 20604.0 19955.0 18730.0 18702.0 20061.0 22710.0 26463.0 18826.0 True False 20836.28782448024 21555.19629216408 21932.16680756561 21851.517200310493 20203.944440877825 18585.27388084534 22088.961656492662 22631.224310553847 21657.98627794299 18659.21628640636 1.1166754007594586 1.155203732102484 1.1754066446801232 1.1710844048809161 1.0827863362941363 0.9960372180467788 1.183809722629398 1.2128711068664324 1.16071253719918 1.0 14.187600771770239 -10.796491441520667 2.3945808714076615 0.9546300398687092 1.1394400158086688 0.3354334366994042 0.05886340861983499 21803771.735281385 13483794.513646156 5744003.464173389 0.016270137294791574 1.597749014992167e-11 10.796491441520667 0.18480997593995963 QQVSWEQEFLVGSS(ph)PGGSGR ddPTM_KYSE-520_SHP099_60min_R1 8 QQVSWEQEFLVGSSPGGSGR 20 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 QQVSWEQEFLVGS(0.11)S(0.889)PGGSGR;QQVSWEQEFLVGS(0.161)S(0.82)PGGS(0.019)GR;QQVSWEQEFLVGS(0.288)S(0.694)PGGS(0.018)GR;QQVSWEQEFLVGS(0.003)S(0.996)PGGSGR;QQVSWEQEFLVGS(0.118)S(0.881)PGGSGR;QQVSWEQEFLVGS(0.009)S(0.986)PGGS(0.005)GR;QQVSWEQEFLVGS(0.011)S(0.87)PGGS(0.118)GR;QQVSWEQEFLVGS(0.011)S(0.988)PGGS(0.001)GR 314.38 1.516e-53 1623132000.0 1715698.0 1862997.0 1679499.0 1330856.0 1470491.0 1599014.0 1369571.0 1744944.0 2116568.0 1718943.0 True False 1620524.811780831 1773495.827704494 1787762.1928334134 1457340.1541035532 1586210.2757507153 1589033.960501873 1508020.602404879 1738891.1965369908 1732252.6055372853 1703714.5023374157 0.95117157807693 1.0409583444123658 1.0493320273911435 0.8553898861013106 0.9310305650239579 0.9326879346990318 0.8851369172099821 1.02064705920582 1.016750519620932 1.0 20.70025216746381 -10.199919984015246 9.050512153689237 1.0000000020855995 0.9636616832137668 0.02723224784596423 0.06280845958591422 2.8068210902316384e-09 3.2169000872595036e-10 0.06512823959743898 0.01579591735677085 6.310736050512336e-11 10.199919984015246 -0.0363383188718327 QRDAYS(ph)AFMDR ddPTM_KYSE-520_SHP099_60min_R1 1 QRDAYSAFMDR 11 1 A0A1B0GW04;A0A1B0GVB3 A0A1B0GW04 1 QRDAY(0.485)S(0.515)AFMDR 50.452 0.049325 334720000.0 251710.0 248800.0 217070.0 293600.0 239380.0 243540.0 285520.0 268930.0 265010.0 274720.0 True False 237747.14452855504 236847.27454358654 231062.67952427975 321503.65572594106 258217.84411411308 242019.97652342365 314383.1480066688 267997.14459873404 216890.86435845043 272286.1945289258 0.8731516665392245 0.8698467983415351 0.8486022580911029 1.1807563592497405 0.9483324872964934 0.8888440963455204 1.1546055375689306 0.9842480081018719 0.7965547600886883 1.0 18.05476431106176 QRDELNR ddPTM_KYSE-520_SHP099_60min_R1 5 QRDELNR 7 1 I3L495;P43034 I3L495 PAFAH1B1 Platelet-activating factor acetylhydrolase IB subunit alpha 0 ;;;; 157.58 0.0012129 893710000.0 304427.0 259243.0 219127.0 178545.0 273929.0 264590.0 201263.0 224175.0 251354.0 239759.0 False True 287539.82744982105 246788.57714832367 233252.2770355965 195513.8631184881 295485.65385719243 262938.5956653227 221608.62817759244 223397.3892478381 205714.4497187049 237634.92178967918 1.2100066155441187 1.0385198239791793 0.9815572361121166 0.8227488689205761 1.2434437313835318 1.1064812935955546 0.9325591815740325 0.9400865309079356 0.8656743216418934 1.0 17.858387338314067 -6.77672875161929 23.497193536915642 0.9295870862116359 1.0588428210347602 0.24197341900670177 0.11423036093892608 194.9952842881316 299669.6049862039 0.050065692452094385 0.03392995081688826 1.6721346575229088e-07 6.77672875161929 0.12925573482312436 QRDWEDKDK ddPTM_KYSE-520_SHP099_60min_R1 3 QRDWEDKDK 9 2 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 0 ;; 127.42 0.00041634 1542940000.0 1435650.0 1617680.0 1143390.0 995460.0 1398890.0 1583570.0 1183110.0 1340970.0 1426160.0 989240.0 False True 1356011.6326026765 1539964.2246128148 1217094.7488886828 1090068.2191040376 1508974.684404677 1573686.3522345321 1302710.3048408849 1336318.488054751 1167205.2945679303 980476.1032170745 1.3830134443393562 1.5706290235529292 1.2413303546055132 1.1117743874913184 1.539022398866762 1.6050226487632433 1.3286507448437717 1.362928156708878 1.1904474680598254 1.0 19.903122943007883 -7.970788009156304 1.8029862063540092 1.0004803587096427 1.3995741323620943 0.4412580723867414 0.14278408985930385 0.3545320501002837 2.6157842900537487 0.14647906968608998 0.04189585361897519 1.0695768411087029e-08 7.970788009156304 0.3990937736524516 QREEKS(ph)PDDLK ddPTM_KYSE-520_SHP099_60min_R1 1 QREEKSPDDLK 11 2 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 QREEKS(1)PDDLK 99.927 0.001233 558030000.0 494020.0 464050.0 395210.0 411110.0 405930.0 389220.0 459560.0 451740.0 463100.0 436180.0 True False 466615.7257955453 441756.34144674963 420685.86895835807 450181.7707952712 437874.38157424045 386790.73360617156 506016.8096733849 450173.0193769089 379012.7138009821 432315.7845429047 1.0793400159767623 1.0218371783806752 0.9730985635954904 1.0413262408895307 1.012857723983437 0.8946949138466743 1.1704796071890033 1.0413059977740229 0.8767033898651633 1.0 18.721725986742893 -4.302820547338573 3.766492191948911 1.006415536149317 1.0840629576936358 0.0811383538605841 0.07739121802351787 0.6598934420995435 17.401421221591775 0.01946421956228465 0.1311404058549871 4.979427949398998e-05 4.302820547338573 0.0776474215443188 QREEKS(ph)PDDLKK ddPTM_KYSE-520_SHP099_60min_R1 4 QREEKSPDDLKK 12 3 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 QREEKS(1)PDDLKK;QREEKS(1)PDDLKK;QREEKS(1)PDDLKK;QREEKS(1)PDDLKK 131.56 7.8648e-05 25575500000.0 11094900.0 11359700.0 9966250.0 9433560.0 10095080.0 9771130.0 10892650.0 10590160.0 12601290.0 9235220.0 True False 10479443.779865183 10813962.960742664 10608690.421563808 10330122.706096776 10889505.36285193 9710144.753253354 11993785.364019478 10553425.206721935 10313213.388670236 9153403.135692427 1.1448685941736843 1.181414475079232 1.1589886585675102 1.1285554184558848 1.1896674058186965 1.0608234565120365 1.3103088748764242 1.1529509899515205 1.1267080926934474 1.0 23.125876790774374 -8.17094015805527 2.5950999098446057 1.0001961942279454 1.166721033911203 0.41741502368991545 0.058935814014620905 0.6658553920442769 7.912078800940785 0.05471550165282586 0.014769169893443497 6.746209781076949e-09 8.17094015805527 0.1665248396832577 QREESYSR ddPTM_KYSE-520_SHP099_60min_R1 6 QREESYSR 8 1 P23246;P23246-2;H0Y9K7;H0Y9U2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ;;;;; 125.16 0.00096296 2599038000.0 551209.0 524465.0 405920.0 325105.4 529700.0 535353.0 391545.7 432885.0 459079.0 447769.0 False True 520632.33796210005 499268.914161985 432086.25269496324 356003.31946949754 571384.3764192733 532011.6633478873 431126.96047378343 431383.42297111807 375721.82603982143 443802.1150190103 1.1731181991771236 1.1249809256555678 0.9736011570752762 0.8021667933111317 1.2874755596755054 1.1987587380585119 0.9714396256433254 0.9720175014322311 0.8465976463941082 1.0 18.7595570174115 -6.9512508337859495 11.378600026720463 0.9399051143961523 1.0850283750986818 0.2331258521329863 0.13001981162432158 1.0948258783651212 252.02174858016048 0.05882663940291398 0.03963977270764049 1.1187915207304995e-07 6.9512508337859495 0.14512326070252946 QREFESR ddPTM_KYSE-520_SHP099_60min_R1 2 QREFESR 7 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;H0YAB0 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ; 125.31 0.0025022 727340000.0 644800.0 495190.0 401630.0 385750.0 625240.0 563970.0 415630.0 440490.0 502680.0 494110.0 False True 609031.658623067 471400.3291046559 427519.71243072115 422411.56402003375 674442.8308710323 560450.054035951 457645.9365579009 438962.04300113855 411405.98353158723 489732.5698117634 1.2436004794558755 0.9625668337432534 0.8729656526521101 0.8625351672697498 1.3771655643206766 1.1444002065277565 0.9344813164740187 0.8963300994456233 0.8400625339044078 1.0 18.901634620541472 -6.8940995367824 6.345081360484502 0.9040734475871232 1.0661546046979486 0.20281130493667066 0.1540538870751674 0.3941473148903869 20.789483000001518 0.0707439174279419 0.04745390432146163 1.2761462928834436e-07 6.8940995367824 0.1620811571108255 QRELEQLGR ddPTM_KYSE-520_SHP099_60min_R1 1 QRELEQLGR 9 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 103.01 0.0022196 385990000.0 108460.0 131830.0 100760.0 65262.0 134540.0 116460.0 79225.0 82609.0 113130.0 121510.0 False True 102443.50759035024 125496.68891913591 107255.15082170017 71464.48085826426 145127.53257211437 115733.12994135654 87233.83616148907 82322.4486600855 92588.44377522159 120433.51593334938 0.8506229083857751 1.0420412286940839 0.8905756009071227 0.5933936272176452 1.2050427279099882 0.9609711137670834 0.7243318895527906 0.6835509868004236 0.7687929980094753 1.0 16.877877415886548 -6.759694471093998 24.983496609325847 0.7677982075311451 0.9254088634317483 0.12081627564887665 0.16522980874331852 85.806789255119 1228604.9250612333 0.06599782701122674 0.04843097895394141 1.7390238127262883e-07 6.759694471093998 0.1576106559006032 QRGEKEDEDEDVKK ddPTM_KYSE-520_SHP099_60min_R1 6 QRGEKEDEDEDVKK 14 3 O43823 O43823 AKAP8 A-kinase anchor protein 8 0 ;;;;; 140.22 2.9956e-06 4510560000.0 4149330.0 4386390.0 2973913.0 2512440.0 3971820.0 4072250.0 2934127.0 3609333.0 4040946.0 3096443.0 False True 3919158.393415713 4175661.2402943815 3165616.190409037 2751221.5422073673 4284379.637435525 4046833.577225561 3230737.191479981 3596813.066247656 3307212.070358938 3069010.924016204 1.277010245465982 1.3605885882054731 1.0314776547834545 0.8964521829094803 1.3960131597801062 1.318611656138958 1.05269654343626 1.1719779288177812 1.0776149555150545 1.0 21.549342350350454 -13.999999999502855 0.06943641583743675 0.37512903582245477 1.4006886422305025 0.1539288102382722 0.14967288998244135 714.8262322633599 3.5693341680101063 71.30939037668115 9.01202593478389 1.0000000011447197e-14 13.999999999502855 1.0255596064080477 QRHS(ph)YPER ddPTM_KYSE-520_SHP099_60min_R1 8 QRHSYPER 8 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 QRHS(1)YPER;QRHS(1)YPER;QRHS(1)YPER;QRHS(1)YPER;QRHS(1)YPER;QRHS(1)YPER;QRHS(1)YPER;QRHS(1)YPER 120.06 0.00062251 3144848000.0 800122.0 817543.0 776721.0 695042.0 752529.0 747145.0 699483.0 768914.0 927380.0 670393.0 True False 755737.6376563368 778267.007122939 826789.6784575412 761098.5827080036 811748.7509956943 742481.7909156352 770193.5679362173 766246.8167998763 758991.1693473448 664453.8395778617 1.1373817000387403 1.1712882983976503 1.2443146975910533 1.1454498979064398 1.2216781703171606 1.1174317111138163 1.1591378092201765 1.1531979667491805 1.142278250404188 1.0 19.341809451627828 -9.932460502263307 0.33957976191405986 0.9205567963033716 1.1839818224696779 0.6820189160250432 0.0349316722888922 7.524481776035613 0.7020902057366163 0.6210785772677793 0.030364979496321345 1.168259974652691e-10 9.932460502263307 0.26342502616630625 QRIDEFEAL ddPTM_KYSE-520_SHP099_60min_R1 1 QRIDEFEAL 9 1 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 63.419 0.061179 0.0 312960.0 281280.0 248050.0 239730.0 259830.0 286120.0 227240.0 212080.0 287030.0 232710.0 False True 295599.48492970696 267766.8865901127 264039.69989403244 262513.86712254724 280277.14276952925 284334.21894917515 250211.63684868117 211344.34397984407 234912.5874374778 230648.37044564047 1.281602312466258 1.1609311874727526 1.1447715818840423 1.1381561752001057 1.2151707043409845 1.232760580097779 1.0848185762823388 0.9163053854293499 1.018487956292942 1.0 17.815335574088166 -7.000364481285908 4.335158497905018 0.9773430953642714 1.1891483484704597 0.8073000627856324 0.04767194344317548 0.0872138311587864 4.021747494335835 0.02264525828119758 0.01381970381856722 9.991611028954831e-08 7.000364481285908 0.21180525310618825 QRKDFEGMAFLETEPGK ddPTM_KYSE-520_SHP099_60min_R1 2 QRKDFEGMAFLETEPGK 17 2 Q8NEA9 Q8NEA9 GMCL1P1 Putative germ cell-less protein-like 1-like 0 ; 53.328 0.044389 1265730000.0 1822990.0 1618970.0 1666130.0 1807920.0 1950480.0 1672840.0 1785870.0 1945520.0 1991330.0 1938990.0 False True 1721865.1106595332 1541192.2510764864 1773531.4057022538 1979744.1732290317 2103971.6792868837 1662399.1850515075 1966403.1680115925 1938771.44520778 1629754.669344226 1921812.0571113927 0.8959591570299581 0.8019474356888975 0.9228433129761844 1.0301445273502523 1.0947853467259898 0.8650165238062876 1.0232026387466957 1.0088246860735584 0.8480302032207312 1.0 20.87403582451432 -4.985057633386758 5.661515935401186 0.9831559057354877 0.8504346698640793 0.3418633739693788 0.07341481080301185 0.174138318241516 18.779333359122376 0.019417942131344738 0.039570330436132096 1.035004806448045e-05 4.985057633386758 -0.13272123587140838 QRLEAEAGR ddPTM_KYSE-520_SHP099_60min_R1 2 QRLEAEAGR 9 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 128.81 0.00066111 1439830000.0 932000.0 874040.0 828520.0 752540.0 897280.0 891120.0 778120.0 906350.0 943860.0 695450.0 False True 880300.1021040622 832049.8064392124 881927.7248788703 824061.1753405996 967890.8311751664 885558.18953582 856779.9633193801 903206.0833936795 772478.8167743359 689288.8540519135 1.2771135017334299 1.2071133916471932 1.2794748089927017 1.195523720565683 1.4041875557475214 1.284741780358347 1.2429911760256782 1.3103448258074617 1.1206895516058308 1.0 19.394749161254264 -7.963215266636077 3.638234239543406 1.0010397602005427 1.2736175893792985 0.7249164664370749 0.05529302333744777 0.1006208120528603 2.992847264554884 0.05333944873064359 0.014113390143327227 1.0883904773759996e-08 7.963215266636077 0.2725778291787557 QRLT(ph)PRPS(ph)PSPMIESTPMSIAGDAT(ph)PLLDEMDR ddPTM_KYSE-520_SHP099_60min_R1 1 QRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR 33 2 Q7KZ85;Q7KZ85-3;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 3 QRLT(0.972)PRPS(0.687)PS(0.209)PMIES(0.066)T(0.066)PMS(0.001)IAGDAT(1)PLLDEMDR 143.54 1.1201999999999999e-06 28372000.0 11109.0 10219.0 8615.5 7276.7 9841.7 9906.8 10888.0 10766.0 13609.0 11017.0 True False 10492.76162475753 9728.06390096828 9170.868915287398 7968.2753801803665 10616.185798386932 9844.967986459134 11988.665296639843 10728.655258803288 11137.948654972077 10919.397951096307 0.9609285852343221 0.8908974601472037 0.8398694649979894 0.7297357799273495 0.9722317884129379 0.9016035527371452 1.0979236538802197 0.9825317574148977 1.0200149041966025 1.0 13.414605693965457 -6.364604812514534 1.9573609044736515 1.0201168919908206 0.8625789540529021 0.4777870062333547 0.07093278361348601 0.2946504692300091 2.225301640481188 0.03041688483756199 0.025957559630095772 4.319119175317212e-07 6.364604812514534 -0.15753793793791848 QRLT(ph)PRPSPS(ph)PMIESTPMSIAGDAT(ph)PLLDEMDR ddPTM_KYSE-520_SHP099_60min_R1 2 QRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR 33 2 Q7KZ85;Q7KZ85-3;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 3 QRLT(0.947)PRPS(0.394)PS(0.616)PMIES(0.022)T(0.022)PMSIAGDAT(1)PLLDEMDR;QRLT(0.768)PRPS(0.453)PS(0.54)PMIES(0.119)T(0.119)PMS(0.001)IAGDAT(1)PLLDEMDR 169.44 2.6263e-10 70157000.0 26980.0 26801.0 21647.0 22920.6 20616.7 24893.4 22797.0 22229.5 27632.0 21655.4 True False 25483.365616703413 25513.43973087884 23042.400256424615 25098.966932670322 22239.116997023266 24738.031056862135 25101.54323727945 22152.39105290431 22614.725346034866 21463.550003646258 1.1872856825815983 1.1886868540639632 1.0735596046558067 1.1693763113933378 1.0361341433847269 1.1525600868756383 1.1694963430101342 1.0320935282905683 1.0536339674561312 1.0 14.389601092600373 -1.000000000054801 0.0522219774013853 0.7768057159924915 1.7393074297541091 0.4872753441851889 0.0501406650837638 404.64835573048856 1.5952269972820665 6.700687151726714 30.9314554048438 0.09999999998738159 1.000000000054801 0.9625017137616176 QRLTPRPS(ph)PS(ph)PMIESTPMSIAGDATPLLDEMDR ddPTM_KYSE-520_SHP099_60min_R1 1 QRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR 33 2 Q7KZ85;Q7KZ85-3;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 2 QRLT(0.411)PRPS(0.549)PS(0.583)PMIES(0.229)T(0.229)PMSIAGDATPLLDEMDR 90.485 0.0014107999999999998 63760000.0 72436.0 57019.0 59048.0 58718.0 47186.0 59705.0 50623.0 56661.0 69192.0 66762.0 True False 68417.83068241399 54279.72165273613 62854.32856014047 64298.541065789555 50899.269748385515 59332.358948554756 55740.46687286913 56464.4562157768 56628.47698837737 66170.54062005006 1.0339620931203786 0.8203004107886804 0.9498838602671964 0.9717094716664099 0.7692134486349163 0.8966582166713734 0.8423758722620961 0.8533171360952693 0.8557958943321465 1.0 16.013901446117586 -4.2469888092368695 24.61176164636427 0.8800287803695714 1.033962225796369 0.30037757770038376 0.06820609803495961 2547.138033128521 4338119.052892228 0.01650023334805903 0.34236036978017964 5.6625387990151306e-05 4.2469888092368695 0.15393344542679754 QRPDLGS(ph)AQK ddPTM_KYSE-520_SHP099_60min_R1 10 QRPDLGSAQK 10 1 A0A3B3ITP6;A0A3B3IS57;A0A3B3IT92;P33991;E5RFR3;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK;QRPDLGS(1)AQK 169.82 7.3135e-05 17935740000.0 22087880.0 17943430.0 17491700.0 15975580.0 17095510.0 16802150.0 16564590.0 16360510.0 20120100.0 16233930.0 True False 20862621.265302863 17081400.68916249 18619242.969709516 17493894.31996673 18440829.37685377 16697281.54940891 18239100.412019413 16303759.20938174 16466797.02644602 16090110.010006424 1.29661147452245 1.0616086949399093 1.1571855604548524 1.0872451654517772 1.1460971593970108 1.0377356984523343 1.1335597084592046 1.0132782932647724 1.0234110901793296 1.0 23.93967085418515 -1.0000000000000002 0.2127354021040813 1.0038289382673267 2.0970385872035306 0.5722332919398834 0.05622078373663506 39.826027821663686 0.49915152982429867 0.08931283622691981 14.796302579007728 0.09999999999999995 1.0000000000000002 1.093209648936204 QRPVPQPSSAS(ph)LDEYTLMR ddPTM_KYSE-520_SHP099_60min_R1 12 QRPVPQPSSASLDEYTLMR 19 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 QRPVPQPSS(0.002)AS(0.932)LDEY(0.004)T(0.061)LMR;QRPVPQPSS(0.002)AS(0.97)LDEY(0.014)T(0.014)LMR;QRPVPQPS(0.017)S(0.017)AS(0.962)LDEYT(0.005)LMR;QRPVPQPSS(0.001)AS(0.999)LDEYTLMR;QRPVPQPS(0.181)S(0.181)AS(0.638)LDEYTLMR;QRPVPQPS(0.032)S(0.032)AS(0.936)LDEYTLMR;QRPVPQPSS(0.006)AS(0.994)LDEYTLMR;QRPVPQPS(0.041)S(0.041)AS(0.884)LDEYT(0.034)LMR;QRPVPQPSS(0.005)AS(0.995)LDEYTLMR;QRPVPQPSS(0.002)AS(0.998)LDEYTLMR;QRPVPQPS(0.001)S(0.012)AS(0.987)LDEYTLMR;QRPVPQPS(0.012)S(0.028)AS(0.96)LDEYTLMR 285.95 8.565899999999999e-44 25485260000.0 10031500.0 8949690.0 8963360.0 7968080.0 7965730.0 9180390.0 8129590.0 8894130.0 10455730.0 9358320.0 True False 9475032.697700523 8519733.45864143 9541152.527483072 8725363.927509403 8592587.632196132 9123091.780717248 8951408.294352537 8863278.338935543 8557232.999504102 9275412.56546279 1.0215214289206953 0.9185287876428108 1.0286499344524869 0.9406982024711756 0.9263833356794098 0.9835780043560852 0.9650684787524503 0.9555670194054937 0.9225716849908276 1.0 23.14498002279991 -4.231343628656745 23.752883670955484 0.9600962931570443 1.0215216257459523 0.22728344301591796 0.03396665869624131 9749.837362374807 7694758.28351686 0.0080768396951217 0.9066209255568993 5.8702469469950336e-05 4.231343628656745 0.06142533258890803 QRPYGS(ph)HR ddPTM_KYSE-520_SHP099_60min_R1 2 QRPYGSHR 8 1 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 QRPY(0.011)GS(0.989)HR;QRPY(0.019)GS(0.981)HR 50.284 0.04676 111196000.0 63134.0 55378.0 56749.0 58366.0 71639.0 81361.0 81243.0 89515.0 91143.0 93304.0 True False 59631.8311654912 52717.55775592735 60407.13134161036 63913.0870916222 77276.58172984772 80853.19581966945 89455.83529527108 89204.49335795804 74593.72872805645 92477.39914941345 0.6448259976380339 0.5700588277872402 0.6532096695757202 0.691121156947325 0.8356266767947685 0.8743022247958869 0.9673264615794341 0.96460858737855 0.806615772222759 1.0 16.496813203350335 -5.790922565509855 1.3485139754356679 0.9302071192924994 0.6081808965004797 0.8677947027757462 0.0529754740000744 0.1384435810318332 0.527361985657273 0.020417655006077184 0.02796387589296807 1.6183685662305799e-06 5.790922565509855 -0.32202622279201976 QRQELEK ddPTM_KYSE-520_SHP099_60min_R1 2 QRQELEK 7 1 P35579 P35579 MYH9 Myosin-9 0 ; 147.29 0.0015773 4139500000.0 3363800.0 3068400.0 1880460.0 1921930.0 3445200.0 3373300.0 2275300.0 2930500.0 2608000.0 2752100.0 False True 3177203.3084309422 2920989.4582377006 2001677.4604423796 2104589.649350676 3716317.6394934473 3352245.983437899 2505309.5287880837 2920334.7794838427 2134452.9423298677 2727718.535101401 1.1647841474644054 1.0708544230825907 0.7338284484575563 0.7715567505473725 1.3624270949037987 1.2289559719229908 0.9184633592318023 1.0706144134388416 0.7825048350344259 1.0 21.37926335409567 -7.741938034546763 24.99270542425915 0.8912523061967201 1.0350180102316489 0.08889253923288365 0.19014818890122714 595.8323672671236 763617.5445215991 0.13901012735155407 0.05237344414266381 1.8115985543826287e-08 7.741938034546763 0.14376570403492872 QRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPPHYEGR ddPTM_KYSE-520_SHP099_60min_R1 2 QRQPPLLGDHPAEYGGPHGGYHSHYHDEGYGPPPPHYEGR 40 1 P14866;M0QXS5;P14866-2 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 ; 248.7 4.4202e-31 4860400000.0 616961.0 728485.0 596200.0 843579.0 213448.0 349924.0 418937.0 445173.0 746822.0 136450.0 False True 582736.9434487377 693487.4871217222 634632.0059537276 923752.4945287246 230245.1432470096 347739.9945182827 461287.2403911104 443628.7987671598 611217.9506505661 135241.15915649373 4.308872735809859 5.127784259222861 4.692595138284537 6.830409472162305 1.7024783333939222 2.5712586071219405 3.4108495022386927 3.2802794765594743 4.519466961557893 1.0 17.04517476122113 -5.768371605551102 24.99994512660379 2.8857693705828247 5.1928117815437815 0.5546441705452857 1.0896361803546784 131.8023256640926 475322.73442005017 0.33430273127085613 0.3872907063652201 1.7046231981719562e-06 5.768371605551102 2.307042410960957 QRQPS(ph)EGS(ph)SSREEEGPSTSCILESLFR ddPTM_KYSE-520_SHP099_60min_R1 1 QRQPSEGSSSREEEGPSTSCILESLFR 27 2 P43355 P43355 MAGEA1 Melanoma-associated antigen 1 2 QRQPS(0.31)EGS(0.696)S(0.51)S(0.484)REEEGPSTSCILESLFR 88.838 0.0035840000000000004 96302000.0 52698.0 45996.0 45560.0 57411.0 55931.0 49269.0 44707.0 49405.0 61094.0 52674.0 True False 49774.736889141466 43786.28311859644 48496.870498577424 62867.32417875343 60332.45149614184 48961.49389559237 49226.41985827313 49233.62558621371 50000.86965440987 52207.34933975191 0.9534047891460715 0.8386996021124659 0.9289280362228763 1.2041853297249236 1.155631386368878 0.9378276145943294 0.9429021101592486 0.9430401314921013 0.9577362246264823 1.0 15.671965291894141 -5.016390892228639 24.82283951043799 1.0206339624896248 0.892992566495832 0.2522512774762852 0.0904514190374329 937.0734712439504 1419136.3005400505 0.02735562093873852 0.04911456837685489 9.629619074370264e-06 5.016390892228639 -0.12764139599379276 QRQPS(ph)EGSSSR ddPTM_KYSE-520_SHP099_60min_R1 3 QRQPSEGSSSR 11 1 P43355 P43355 MAGEA1 Melanoma-associated antigen 1 1 QRQPS(0.959)EGS(0.006)S(0.033)S(0.002)R;QRQPS(0.997)EGS(0.003)SSR;QRQPS(1)EGSSSR 131.53 5.5803e-05 565010000.0 988501.0 1011295.0 1021316.0 930681.0 972147.0 1033210.0 986097.0 1005834.0 1332351.0 1049608.0 True False 933666.8790021105 962710.8702152582 1087151.6635233767 1019132.6424205549 1048649.4381402053 1026761.3531402099 1085781.3081392958 1002344.9966174205 1090429.6442354838 1040309.2897026681 0.8974897064208307 0.9254083182227582 1.0450273531961793 0.9796438929347966 1.00801698929356 0.9869770108788221 1.0437100955328622 0.9635067249124554 1.048178320648411 1.0 19.988581082674393 -4.637084678766155 5.596907107464486 1.007182164960146 0.9045142904484912 0.6691530936316654 0.027746854224208504 0.10186770739478866 4.47050221607604 0.006498563937611435 0.017888623500542905 2.306297462849315e-05 4.637084678766155 -0.10266787451165482 QRQPS(ph)EGSSSREEEGPSTSCILESLFR ddPTM_KYSE-520_SHP099_60min_R1 6 QRQPSEGSSSREEEGPSTSCILESLFR 27 2 P43355 P43355 MAGEA1 Melanoma-associated antigen 1 1 QRQPS(0.494)EGS(0.397)S(0.054)S(0.054)REEEGPSTSCILESLFR;QRQPS(0.631)EGS(0.121)S(0.121)S(0.121)REEEGPS(0.002)T(0.003)SCILESLFR;QRQPS(0.976)EGS(0.017)S(0.004)S(0.004)REEEGPSTSCILESLFR;QRQPS(0.997)EGS(0.002)S(0.001)S(0.001)REEEGPSTSCILESLFR;QRQPS(0.996)EGS(0.003)S(0.001)SREEEGPSTSCILESLFR;QRQPS(0.631)EGS(0.116)S(0.116)S(0.136)REEEGPS(0.001)TSCILESLFR 236.49 5.1186e-31 806722000.0 198903.0 250098.0 211720.0 164458.0 218997.0 171169.0 168932.0 203128.9 287044.0 194332.0 True False 187869.4540866995 238082.9166752485 225367.8099639771 180088.03887389947 236230.81797751854 170100.67077908322 186009.29517743966 202424.29325654142 234924.04539038913 192610.36966800797 0.9753859795322539 1.2360856639526683 1.1700710109867467 0.9349862065282748 1.2264698852128095 0.8831335045578101 0.9657283535567363 1.0509522078455547 1.2196853460969674 1.0 17.555325850857496 -5.2272509377458904 24.793741161933028 1.0403812264546948 1.1380713741959982 0.09567431181239727 0.12125456028378159 1268.6771843819301 920053.024951321 0.03251603519804364 0.05631592068427559 5.9258282801641586e-06 5.2272509377458904 0.09769014774130347 QRS(ph)APDLK ddPTM_KYSE-520_SHP099_60min_R1 5 QRSAPDLK 8 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 QRS(1)APDLK;QRS(1)APDLK;QRS(1)APDLK;QRS(1)APDLK;QRS(1)APDLK 130.44 0.00052649 2775860000.0 2888920.0 2506040.0 2524110.0 2141120.0 2341520.0 2409240.0 2384200.0 2293170.0 3085880.0 2277330.0 True False 2728665.84868076 2385646.076757273 2686818.16931879 2344611.401048801 2525784.3025736404 2394203.0394977997 2625218.2035496603 2285215.5284999036 2525561.9807043285 2257154.6279359297 1.2088962869043698 1.0569262943845559 1.190356272479112 1.038746469572998 1.1190125263519766 1.060717334056637 1.163065290724149 1.0124319797220247 1.1189140298349192 1.0 21.10607382405907 -1.248084797187698 0.013820742661212963 4.760658654741839e-07 2.3880894754979565 0.30365270692799684 0.058676087035445884 7781.373549263329 8.659931519617025 613.7572724309604 909.2470808855684 0.05648266800878856 1.248084797187698 2.388088999432091 QRS(ph)DDESPSTSSGSSDADQR ddPTM_KYSE-520_SHP099_60min_R1 4 QRSDDESPSTSSGSSDADQR 20 1 R4GN77;R4GND1;A0A1B0GX65;Q969T4;R4GMM6;R4GNG6 R4GN77 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 1 QRS(1)DDESPSTSSGSSDADQR;QRS(1)DDESPSTSSGSSDADQR;QRS(0.997)DDES(0.003)PSTSSGSSDADQR;QRS(1)DDESPSTSSGSSDADQR 243.9 1.5137000000000002e-26 639523000.0 436473.0 366961.0 344305.0 420433.0 393003.0 391990.0 436598.0 422993.0 433422.0 401634.0 True False 412260.97260264645 349331.6427403097 366499.451207478 460390.8259122096 423930.1002188101 389543.4450086921 480733.58662586054 421525.73601030797 354723.49047948455 398075.8352265233 1.0356342589045908 0.8775504861819208 0.9206774658876823 1.1565405010083725 1.0649480895457384 0.9785659176900907 1.2076432279600726 1.0589081243036031 0.8910952614785842 1.0 18.60268377124417 -5.232039526928207 24.615672749883625 1.057632042510595 0.9379136813187242 0.21946148193401205 0.09118054567401931 818.1506430106667 685013.3018876504 0.02475141685541584 0.042861994251454504 5.860848200949143e-06 5.232039526928207 -0.11971836119187074 QRS(ph)DDESPSTSSGSSDADQRDPAAPEPEEQEER ddPTM_KYSE-520_SHP099_60min_R1 1 QRSDDESPSTSSGSSDADQRDPAAPEPEEQEER 33 2 R4GN77;R4GND1;A0A1B0GX65;Q969T4;R4GMM6;R4GNG6 R4GN77 UBE2E3 Ubiquitin-conjugating enzyme E2 E3 1 QRS(0.997)DDES(0.003)PSTSSGSSDADQRDPAAPEPEEQEER 114.85 3.0558e-06 402960000.0 147290.0 139040.0 126060.0 128740.0 112860.0 104400.0 106100.0 107400.0 154580.0 113070.0 True False 139119.53008466432 132360.30969670514 134186.02930313154 140975.41089290747 121741.43991444049 103748.40087478625 116825.62343621303 107027.45446734835 126512.16864468988 112068.28776712895 1.2413817758485453 1.1810683676343996 1.1973595026450472 1.2579420432107054 1.0863148026979028 0.9257605602966745 1.0424503288474394 0.9550199846877723 1.1288846395830945 1.0 16.77401856744514 -5.939436600177318 4.665560867878783 1.008888799650908 1.2137826032498582 0.7648002379439619 0.05458304513459036 0.09437648300385179 4.17346005225964 0.016560621766059658 0.018713467650643738 1.149644060218562e-06 5.939436600177318 0.20489380359895026 QRS(ph)IQEDTK ddPTM_KYSE-520_SHP099_60min_R1 3 QRSIQEDTK 9 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 QRS(1)IQEDTK;QRS(0.971)IQEDT(0.029)K;QRS(0.979)IQEDT(0.021)K 94.12200000000001 0.0054383 705530000.0 1829590.0 1669720.0 1691680.0 1566870.0 1765860.0 1765890.0 1816050.0 1759730.0 2225770.0 1908590.0 True False 1728098.9955027592 1589504.1448991825 1800728.3995837024 1715784.8537033554 1904823.1356309925 1754868.4254863635 1999634.0569400054 1753625.9073540706 1821626.2750956863 1891681.3774605505 0.9135254044857231 0.8402599739248796 0.9519195045420672 0.9070157766244314 1.006947130910642 0.9276765349575684 1.0570670519706515 0.9270197022863281 0.9629667537040999 1.0 20.85123768027011 -5.293598353362068 1.297497036163848 0.9778311184966956 0.8803744813626745 0.40008926790234833 0.04491148213195048 0.4602563267866245 1.497524817886137 0.014801886278765618 0.03568981347059029 5.0862961878416515e-06 5.293598353362068 -0.09745663713402108 QRS(ph)IQEDTKK ddPTM_KYSE-520_SHP099_60min_R1 2 QRSIQEDTKK 10 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 QRS(0.983)IQEDT(0.017)KK;QRS(0.995)IQEDT(0.005)KK 65.805 0.022183 837150000.0 1100930.0 967660.0 900710.0 872030.0 895030.0 950600.0 927050.0 981410.0 1237300.0 985190.0 True False 1039859.2182504546 921172.1611127283 958771.207786954 954907.4690146208 965463.7689759132 944666.9527928345 1020765.2611361115 978005.7177728161 1012637.5097947655 976461.9830662209 1.0649254515625461 0.9433773941921679 0.981882781320666 0.9779259055391833 0.9887366694443425 0.9674385374701985 1.0453712267740034 1.0015809470653918 1.0370475526501797 1.0 19.897204350694803 -6.754751858524046 24.999943626809728 1.0211316780743063 0.9847628626102397 0.20787381705604702 0.031905192206723484 227.42145499774148 850172.404647449 0.011689517577668809 0.008849259986594037 1.758928320260857e-07 6.754751858524046 -0.03636881546406656 QRS(ph)PIALPVK ddPTM_KYSE-520_SHP099_60min_R1 6 QRSPIALPVK 10 1 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 QRS(1)PIALPVK;QRS(1)PIALPVK;QRS(1)PIALPVK;QRS(1)PIALPVK;QRS(1)PIALPVK;QRS(1)PIALPVK 120.29 0.00033997 13699700000.0 19188700.0 16786900.0 16969600.0 15437900.0 16621200.0 17033800.0 16754400.0 16632600.0 19100800.0 16105700.0 True False 18124264.559274886 15980432.126349408 18063487.56831998 16905113.3744261 17929193.878308505 16927485.735832732 18448098.259186495 16574905.392678028 15632576.211984016 15963016.028044982 1.1353909892361735 1.00109102805346 1.1315836265894075 1.059017503003566 1.1231708247870702 1.0604190151844302 1.155677487686258 1.0383316889213188 0.979299662702811 1.0 23.928229922139113 -7.5143430752046285 6.37433025445177 0.9948041487875467 1.0918353952056117 0.4875887379187861 0.0437188905977394 0.11709203339684693 22.662034309073253 0.02531556638390394 0.010578309790250415 3.059545560646965e-08 7.5143430752046285 0.09703124641806493 QRS(ph)PIALPVKQEPPQIDAVK ddPTM_KYSE-520_SHP099_60min_R1 2 QRSPIALPVKQEPPQIDAVK 20 2 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 QRS(1)PIALPVKQEPPQIDAVK;QRS(1)PIALPVKQEPPQIDAVK 103.63 0.00036022 1058640000.0 445450.0 439640.0 539390.0 290170.0 364040.0 364680.0 323030.0 385900.0 577640.0 367440.0 True False 420740.0005174405 418519.03448690654 574159.9424545149 317747.66955720796 392687.8768957371 362403.8968488221 355685.0248689908 384561.4029697374 472755.1371194111 364184.76746399415 1.1552926923530313 1.1491942329199265 1.5765622116836076 0.8724902795079773 1.0782655178859477 0.9951099804981599 0.9766609057973747 1.0559513667955864 1.2981189202707413 1.0 18.47431105528057 -5.282665148685324 24.986968059627987 1.0389907901257585 1.2792342540275803 0.3753679949450247 0.14990220781447505 859.0445060836996 1011265.176170107 0.04218994303737101 0.06264805972257034 5.215967195103515e-06 5.282665148685324 0.24024346390182183 QRS(ph)PS(ph)PAPAPAPAAAAGPPTR ddPTM_KYSE-520_SHP099_60min_R1 7 QRSPSPAPAPAPAAAAGPPTR 21 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 QRS(1)PS(1)PAPAPAPAAAAGPPTR;QRS(0.934)PS(0.998)PAPAPAPAAAAGPPT(0.068)R;QRS(1)PS(1)PAPAPAPAAAAGPPTR;QRS(1)PS(1)PAPAPAPAAAAGPPTR;QRS(1)PS(1)PAPAPAPAAAAGPPTR;QRS(1)PS(1)PAPAPAPAAAAGPPTR;QRS(1)PS(1)PAPAPAPAAAAGPPTR 131.59 5.8973999999999995e-05 3766720000.0 3820330.0 3337850.0 3723140.0 3144844.0 3438600.0 3427230.0 3496237.0 3532800.0 4141930.0 3368320.0 True False 3608408.6792609566 3177494.675785008 3963139.561634626 3443729.028228172 3709198.2570423074 3405839.3863035804 3849670.7559449156 3520545.541361718 3389859.9215584174 3338479.305313305 1.080853990473462 0.9517790542322414 1.1871092192565496 1.0315262469194757 1.1110442563292187 1.020176875406437 1.1531210482024052 1.0545356790915696 1.0153904252643826 1.0 21.6707596665524 -7.726350250271025 3.703180306915475 1.0041358400272244 1.0750796204019375 0.15441863098881736 0.06343856790435141 0.4097730771762077 11.08553101381827 0.05187999659701513 0.015581720316975639 1.8778017943987055e-08 7.726350250271025 0.07094378037471305 QRS(ph)SDYQFPS(ph)SPFTDTLK ddPTM_KYSE-520_SHP099_60min_R1 1 QRSSDYQFPSSPFTDTLK 18 1 Q9UK61;Q9UK61-3 Q9UK61 FAM208A Protein FAM208A 2 QRS(0.949)S(0.051)DY(0.001)QFPS(0.673)S(0.327)PFTDTLK 165.85 1.499e-08 189730000.0 96173.0 97963.0 117610.0 88642.0 105230.0 107990.0 102400.0 88236.0 149960.0 109550.0 True False 90838.0919738775 93256.7104345392 125191.32878265355 97066.50902881088 113511.00232320183 107315.99435314347 112751.59132769282 87929.92991043717 122731.04418396745 108579.4722286103 0.8366046556444947 0.858879754344269 1.1529926072864636 0.8939674050398837 1.045418622814894 0.988363565879132 1.0384245660201614 0.8098209367356637 1.1303337699557197 1.0 16.72839185093721 -4.559826897708149 24.98533766186666 0.9988611492642263 0.8421731530550615 0.30605969044991055 0.09573704746069955 163.9403011657714 110860.29698845318 0.02260399386665959 0.05980483174944958 2.755326710216312e-05 4.559826897708149 -0.15668799620916485 QRS(ph)SDYQFPSS(ph)PFTDTLK ddPTM_KYSE-520_SHP099_60min_R1 1 QRSSDYQFPSSPFTDTLK 18 1 Q9UK61;Q9UK61-3 Q9UK61 FAM208A Protein FAM208A 2 QRS(0.776)S(0.174)DY(0.05)QFPS(0.137)S(0.862)PFT(0.001)DTLK 120.85 4.1006999999999995e-05 201080000.0 129070.0 141520.0 133810.0 131370.0 125330.0 146360.0 129110.0 151820.0 208030.0 153260.0 True False 121910.22980533403 134721.16677414914 142435.6067035698 143855.36530216923 135192.75796984605 145446.5129505146 142161.69879217216 151293.37185505434 170256.99600954077 151902.23563447568 0.8025571795973313 0.8868939039075793 0.9376794627717951 0.9470259914299765 0.8899984743816551 0.9575008053239217 0.9358762772541261 0.9959917391809396 1.12083272045602 1.0 17.212783577423856 -1.038992988740687 0.1963352694336301 1.0496856486569375 8.425667542816652e-16 0.6319272136147065 0.048334438527338326 36.71511983131438 0.4438845278611271 0.09708833475485307 11.75853339908685 0.09141279990529019 1.038992988740687 -1.0496856486569366 QRSMS(ph)PTS(ph)TPK ddPTM_KYSE-520_SHP099_60min_R1 1 QRSMSPTSTPK 11 1 E9PQ01;E9PKN0;O94913 E9PQ01 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 2 QRS(0.109)MS(0.888)PT(0.27)S(0.73)T(0.002)PK 129.54 0.00024366 0.0 705430.0 713040.0 725060.0 594670.0 625500.0 720970.0 721960.0 689520.0 874920.0 625210.0 True False 666298.3916601597 678784.4881051398 771798.5277370176 651187.2580059443 674723.291391835 716470.1587997571 794942.7624505984 687128.2160551787 716056.5829383625 619671.1258060192 1.0752451807295225 1.0953947341377746 1.2454969992883291 1.0508594492908339 1.0888409404491912 1.1562103331308675 1.2828462217222074 1.1088595021454593 1.1555429212664585 1.0 19.241143220498525 QRSMSPT(ph)S(ph)TPK ddPTM_KYSE-520_SHP099_60min_R1 1 QRSMSPTSTPK 11 1 E9PQ01;E9PKN0;O94913 E9PQ01 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 2 QRS(0.176)MS(0.548)PT(0.736)S(0.538)T(0.002)PK 119.39 0.00039408 304970000.0 878070.0 860630.0 849690.0 679770.0 775380.0 731820.0 730930.0 743400.0 974810.0 725170.0 True False 829361.7067108509 819284.0429680326 904462.3769520691 744375.136419698 836397.9946912886 727252.4399251543 804819.5375893618 740821.318910865 797809.0769603447 718745.5579737228 1.1539016798225168 1.139880495787336 1.258390214614914 1.0356587643035036 1.16369135838453 1.0118357349928033 1.1197558421902425 1.0307142919942043 1.1100020975566327 1.0 19.455121609194634 -5.275796066502065 24.980673902906272 1.0725404776967353 1.1796397720085883 0.4662825456508114 0.05695868070387782 678.8745549048126 1181241.9264222935 0.015041033667503133 0.02241317902915518 5.2991221860123e-06 5.275796066502065 0.10709929431185294 QRSPLS(ph)DYMNLDFS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 QRSPLSDYMNLDFSSPK 17 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 2 QRS(0.242)PLS(0.758)DYMNLDFS(0.624)S(0.376)PK 99.838 0.00061625 257250000.0 129730.0 165680.0 131770.0 133440.0 151840.0 136740.0 117300.0 132570.0 155340.0 152040.0 True False 122533.6182896566 157720.4841092501 140264.1050394545 146122.09747980093 163788.9441485792 135886.55493887246 129157.82873767943 132110.14561207045 127134.17180273087 150693.0438853302 0.8131338722104419 1.0466341381309374 0.9307934953267545 0.9696671705098243 1.0869044776427392 0.9017440449492498 0.8570921749776454 0.8766837685792558 0.8436631746550528 1.0 17.201253296921593 -6.498925449378613 24.836427389105285 0.8834169353368758 0.9738571448859783 0.1741092155545183 0.07854329720896748 1013.2217029623095 1050579.9530515478 0.026555704904158556 0.023285023275465836 3.17011159499969e-07 6.498925449378613 0.09044020954910248 QRSPLS(ph)DYMNLDFSSPK ddPTM_KYSE-520_SHP099_60min_R1 1 QRSPLSDYMNLDFSSPK 17 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 QRS(0.305)PLS(0.656)DY(0.039)MNLDFSSPK 76.71300000000001 0.0072616 53357000.0 130270.0 66107.0 70726.0 84300.0 80911.0 60137.0 54270.0 54441.0 108930.0 56316.0 True False 123043.66341319325 62931.12049137003 75285.1111256011 92311.84665428076 87278.23537938412 59761.66267631253 59756.141224159146 54252.15687762494 89151.0579018376 55817.084053185004 2.204408659111461 1.127452670788149 1.348782588747669 1.6538278238670068 1.5636473466837058 1.0706697365159554 1.0705708160465859 0.9719632939967102 1.597200201588648 1.0 15.768419137921683 -6.257253030210178 24.06582879483919 1.135859131260829 1.545801157991546 0.33789421362236216 0.3043437604830759 274.09814825687755 1575694.1997321313 0.1001873416049485 0.09668807784043446 5.530278082877394e-07 6.257253030210178 0.409942026730717 QRSS(ph)PVTK ddPTM_KYSE-520_SHP099_60min_R1 5 QRSSPVTK 8 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 QRS(0.204)S(0.796)PVTK;QRS(0.231)S(0.769)PVTK;QRS(0.14)S(0.86)PVTK;QRS(0.171)S(0.829)PVTK;QRS(0.154)S(0.846)PVTK 118.28 0.00063901 8464770000.0 3049550.0 2935650.0 2105360.0 2210010.0 2955630.0 4058450.0 3890180.0 1911580.0 3194430.0 6457050.0 True False 2880385.382372788 2794616.9674995146 2241074.874295106 2420048.685936268 3188221.265765706 4033119.7081444133 4283437.358898092 1904949.1751461264 2614402.0370271504 6399845.56050888 0.4500710767376324 0.43666943851646667 0.35017639927500194 0.37814173218014957 0.4981715942395642 0.6301901616237943 0.6693032383983806 0.2976554913919916 0.40851017611419793 1.0 22.60960566009676 -11.065148011780732 2.4803868688829342 1.7843945573996431 0.4593228209647243 0.6834194248340497 0.11073255456161511 10063187.133335082 3307608.399507835 44697780.06882178 0.030305592197938394 8.607003671421595e-12 11.065148011780732 -1.3250717364349187 QRTLS(ph)MIEEEIR ddPTM_KYSE-520_SHP099_60min_R1 1 QRTLSMIEEEIR 12 1 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 QRTLS(1)MIEEEIR 186.72 4.0012999999999996e-08 0.0 31409.0 41451.0 38538.0 21958.0 27008.0 29429.0 24409.0 30214.0 46203.0 33605.0 True False 29666.680157710794 39459.63174078054 41022.22114298016 24044.881718086574 29133.375945500713 29245.32269486674 26876.49992888338 30109.194686000614 37813.69988284776 33307.28584429436 0.8906964168860005 1.184714717531993 1.2316290596223225 0.721910570272586 0.8746847786305394 0.8780458075024012 0.8069255493985982 0.9039822346004338 1.1352981464662142 1.0 15.023550175515652 -5.253353008375793 24.999695968851512 0.8927574833453693 1.1105835242226632 0.31918153793607584 0.13268368544482328 686.1299802305901 2121224.198385553 0.036442726760962565 0.06173739457267366 5.580164368293199e-06 5.253353008375793 0.21782604087729385 QRVEQFAR ddPTM_KYSE-520_SHP099_60min_R1 2 QRVEQFAR 8 1 P34897-3;P34897-2;P34897 P34897-3 SHMT2 Serine hydroxymethyltransferase, mitochondrial 0 ; 163.32 0.00021493 1651810000.0 1082120.0 1053140.0 666050.0 714640.0 1154340.0 990830.0 808510.0 895090.0 962770.0 805840.0 False True 1022092.6464472595 1002545.5736046315 708984.6487176797 782559.1707356487 1245179.990703838 984645.8624402722 890242.0810971975 891985.1417055755 787955.2374566441 798700.8845340328 1.2796938957236224 1.255220312156688 0.8876722969091312 0.9797900389107479 1.559006650443719 1.2328092800532215 1.1146126144790367 1.1167949841772935 0.9865460934306367 1.0 19.607295785857527 -7.505438045060407 1.8147016963941613 0.9908314727764536 1.189052200979429 0.16986112560341904 0.17060652125502582 0.7594183231595489 4.479835911796986 0.16127261823286881 0.053088386011698234 3.122927880472328e-08 7.505438045060407 0.19822072820297554 QRVES(ph)LRK ddPTM_KYSE-520_SHP099_60min_R1 3 QRVESLRK 8 2 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23;A0A2R8YF29 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 QRVES(1)LRK;QRVES(1)LRK;QRVES(1)LRK 76.92699999999999 0.011189 2246250000.0 1069200.0 1093650.0 1153550.0 983430.0 1125330.0 957940.0 1111620.0 1069140.0 1375480.0 1021910.0 True False 1009889.3446026416 1041109.4123978827 1227909.678745258 1076894.8915209891 1213887.0687481596 951961.1411301986 1223993.3979657236 1065431.4028791522 1125727.505029098 1012856.6724339506 0.9970703378749747 1.027894114471339 1.2123232360157365 1.0632253514538748 1.1984786216899987 0.9398774446956877 1.2084566664544942 1.0519073743364513 1.111438109326873 1.0 19.949998604669084 -4.54311883801184 24.98730086481949 1.101976119658764 1.0047761678262135 0.14071218987277778 0.08582531421259823 337.15705232152095 416234.3987580595 0.020104095310643465 0.053201108705487214 2.863394338833707e-05 4.54311883801184 -0.09719995183255059 QRVS(ph)GNTSR ddPTM_KYSE-520_SHP099_60min_R1 1 QRVSGNTSR 9 1 P07910;G3V2Q1;P07910-3;G3V5V7;G3V576;G3V555;G3V575;P07910-2;G3V2D6;G3V4C1;B2R5W2;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 QRVS(0.632)GNT(0.184)S(0.184)R 80.318 0.016721 31057000.0 60397.0 52483.0 52604.0 60110.0 58668.0 73500.0 69235.0 60157.0 87164.0 76984.0 True False 57046.658011565465 49961.63790141093 55994.93800937589 65822.83632726953 63284.837824742084 73041.25923655929 76233.9494684846 59948.32940774938 71337.21482562904 76301.98165264563 0.7476432037016103 0.6547882088941606 0.7338595511750299 0.8626622127183934 0.8293996624207964 0.9572655605337966 0.9991083824733317 0.7856719853051258 0.9349326620425402 1.0 16.219432905591162 -5.420196110023304 1.4141525701431816 0.9202440293457264 0.6931131289559154 0.667774507512092 0.06578069867286047 0.26416655242536224 1.0505339712003092 0.022993694104877636 0.04540107329049769 3.800177567462829e-06 5.420196110023304 -0.22713090038981099 QRVSGNT(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 QRVSGNTSR 9 1 P07910;G3V2Q1;P07910-3;G3V5V7;G3V576;G3V555;G3V575;P07910-2;G3V2D6;G3V4C1;B2R5W2;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 QRVS(0.009)GNT(0.495)S(0.495)R 98.898 0.0086957 32123000.0 66274.0 53030.0 53888.0 65361.0 61626.0 61069.0 67947.0 61856.0 86839.0 83255.0 True False 62597.6491060564 50482.35920034722 57361.706703848504 71572.88978849872 66475.61559602438 60687.84571860463 74815.74585881596 61641.43597329891 71071.22663304581 82517.42547140988 0.7585991534326872 0.6117781657867893 0.6951465872347512 0.867366975879499 0.8055948815205878 0.7354549099405843 0.9066660215270247 0.7470111388128081 0.8612874944537638 1.0 16.33241118965447 -11.318366422557785 0.03766081723244789 2.002275235480653 1.3602155047143946e-09 0.5626139621695425 0.07086058844279079 407.47264873319745 1.959956114503879 72.04291409091236 36.830417665144616 4.804338261956288e-12 11.318366422557785 -2.0022752341204373 QRWDEAFR ddPTM_KYSE-520_SHP099_60min_R1 2 QRWDEAFR 8 1 H7C4A8;G3V5Q1;G3V3M6;P27695 H7C4A8 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial 0 ; 211.45 1.1518e-08 2032130000.0 1371560.0 1210120.0 895010.0 727840.0 1328580.0 1278890.0 896820.0 984810.0 939150.0 999390.0 False True 1295476.8326629254 1151984.0187728484 952703.7766666319 797013.6947669255 1433131.687413852 1270907.97312984 987479.3177197429 981393.9239663827 768624.0340448986 990536.1821136535 1.3078541259326588 1.1629903476263632 0.9618061347680475 0.8046285528573217 1.4468241678519678 1.2830505296817283 0.9969139295978187 0.9907703945475645 0.7759676505756427 1.0 19.917850148998877 -6.95355043463126 6.114317468137576 0.9273205210870424 1.1492786171747866 0.273158694138099 0.1783471833958179 0.29709195887836987 26.35875206613059 0.08261503632584984 0.05476135110946266 1.1128831461439576e-07 6.95355043463126 0.2219580960877442 QRWDEAFRK ddPTM_KYSE-520_SHP099_60min_R1 1 QRWDEAFRK 9 2 H7C4A8;G3V5Q1;G3V3M6;P27695 H7C4A8 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial 0 88.49600000000001 0.0029165 278380000.0 105320.0 117970.0 99863.0 70398.0 99398.0 87215.0 71170.0 70072.0 99527.0 65583.0 False True 99477.68964978505 112302.54412341991 106300.32876644949 77088.60475406954 107220.05710274293 86670.65883423843 78364.55815226473 69828.93658692768 81455.40567149724 65001.98564280195 1.5303792440500747 1.7276786703185247 1.6353397163986596 1.1859423060963987 1.649488950875088 1.3333540195296478 1.2055717587289196 1.074258515280606 1.2531218064492662 1.0 15.988196168971598 -6.375391958656009 0.4352947279865436 1.0113084774642025 1.6945213205448966 0.6513541781827508 0.1447964314601892 0.7687024491492527 0.3108160901379207 0.14623284589336732 0.20424019853227496 4.213160863693794e-07 6.375391958656009 0.6832128430806941 QS(ph)EDLGSQFTEIFIK ddPTM_KYSE-520_SHP099_60min_R1 3 QSEDLGSQFTEIFIK 15 0 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 1 QS(1)EDLGSQFTEIFIK;QS(1)EDLGSQFTEIFIK;QS(1)EDLGSQFTEIFIK 186.97 5.5276000000000006e-11 59252000.0 72935.0 66537.0 59608.0 67072.0 66839.0 71792.0 70138.0 82004.0 83965.0 82778.0 True False 68889.15015768209 63340.46264592679 63450.42705617213 73446.50271406787 72098.84903811169 71343.91949810968 77228.23352091527 81719.54726387752 68719.07258540166 82044.6513203095 0.8396543717241581 0.7720242773491728 0.7733645769113713 0.8952015948891817 0.8787757383065896 0.869574290950141 0.9412951640126971 0.9960374740924581 0.8375813837896195 1.0 16.324121663743185 -5.843382641556933 0.7425287913454461 0.9457085355317071 0.7861850644593088 0.5471285801670465 0.05143560557484976 0.5522286144320997 0.6682935686217578 0.031003093323461017 0.04935433699809663 1.4342252312259176e-06 5.843382641556933 -0.15952347107239828 QS(ph)HSGSIS(ph)PYPK ddPTM_KYSE-520_SHP099_60min_R1 1 QSHSGSISPYPK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QS(0.431)HS(0.429)GS(0.366)IS(0.749)PY(0.025)PK 51.193000000000005 0.047313 0.0 969860.0 885860.0 886840.0 1130800.0 1002200.0 1047700.0 1057000.0 954690.0 1331100.0 941180.0 True False 916059.9324320237 843301.955897031 944007.1253941705 1238270.8920125817 1081067.4382620275 1041160.9156754181 1163851.8753258935 951378.4032163206 1089405.794300341 932841.8774269609 0.9820098717681646 0.9040138273199033 1.0119690681104567 1.3274177778425638 1.158896769561755 1.116117255099258 1.2476411099125642 1.0198710266315323 1.1678354291996702 1.0 19.83127303034236 -5.0143511289301665 23.483181222303795 1.153663523616123 0.9467566603318195 0.4602719318758868 0.09232709736050299 232.87212529246543 381059.9746535865 0.02398834018912228 0.04378784398822109 9.674953158948832e-06 5.0143511289301665 -0.20690686328430352 QS(ph)IINPDWNFEK ddPTM_KYSE-520_SHP099_60min_R1 1 QSIINPDWNFEK 12 0 I3L0N3;P46459-2;P46459 I3L0N3 NSF Vesicle-fusing ATPase 1 QS(1)IINPDWNFEK 132.59 5.4991e-05 134380000.0 136520.0 126300.0 124640.0 164620.0 149940.0 137880.0 138080.0 165220.0 151710.0 181630.0 True False 128946.96345412698 120232.35841983515 132674.4938310512 180265.4353051923 161739.42495810057 137019.4397760108 152038.4739309361 164646.89038263776 124163.28829787749 180020.89950600185 0.7162888520609126 0.6678800003208885 0.7369949500037236 1.0013583744990804 0.8984480435434565 0.7611307362201166 0.844560128008177 0.9145987540027177 0.6897159643052329 1.0 17.45780488023273 -5.0223369457422775 21.495095384462726 0.8648665093167026 0.6946725296749187 0.4122975055016861 0.09139386378543647 118.49940728567147 114035.2178047441 0.02433808949061151 0.04278021612326387 9.498675565265546e-06 5.0223369457422775 -0.17019397964178395 QS(ph)LGELIGTLNAAK ddPTM_KYSE-520_SHP099_60min_R1 6 QSLGELIGTLNAAK 14 0 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 1 QS(1)LGELIGTLNAAK;QS(0.995)LGELIGT(0.005)LNAAK;QS(1)LGELIGTLNAAK;QS(1)LGELIGTLNAAK;QS(1)LGELIGTLNAAK;QS(1)LGELIGTLNAAK 242.1 1.7815e-18 6551706800.0 11430914.0 10298711.0 9409277.0 9012634.0 9219735.0 10907579.0 11071066.0 11007998.0 11594229.0 10773767.0 True False 10796818.413457885 9803945.464879626 10015814.050795505 9869192.025612788 9945275.691383692 10839500.753500009 12190237.394471824 10969813.824224055 9489009.28032833 10678319.80624388 1.0110971210231703 0.9181168613387113 0.937957865331867 0.924227051136081 0.9313521108038402 1.0150942236401164 1.1415875920239706 1.0272977418984708 0.8886238146547989 1.0 23.348181326415475 -6.296444773619302 6.733398743565386 1.024536502052585 0.9415680708958702 0.23259370240282784 0.06217132047517345 0.29465472485501437 43.218768024961776 0.022736528463813577 0.020304435986264427 5.053068974185903e-07 6.296444773619302 -0.0829684311567147 QS(ph)LSLPSMLR ddPTM_KYSE-520_SHP099_60min_R1 1 QSLSLPSMLR 10 0 Q96R06 Q96R06 SPAG5 Sperm-associated antigen 5 1 QS(0.993)LS(0.007)LPSMLR 95.98 0.0039109999999999995 0.0 52429.0 44627.0 48456.0 47800.0 40704.0 42756.0 44473.0 55643.0 59110.0 46086.0 True False 49520.65885537967 42483.05193350734 51579.55129234122 52342.89762840595 43907.17322592047 42489.143944467076 48968.76485465321 55449.98742017385 48377.11404183991 45677.71389436545 1.0841317271241164 0.9300608176616258 1.1292060590340487 1.1459176295349291 0.9612384132765589 0.930194187098061 1.0720493798769934 1.2139396369180782 1.0590966560567612 1.0 15.479202827189905 -6.998293824477175 24.98867428361395 1.1105097962027892 1.0296213746740028 0.0805145768265928 0.08743058064330855 109.25001172965831 1600068.0061666975 0.03779181193109018 0.025271451219009644 1.003936341445791e-07 6.998293824477175 -0.08088842152878639 QS(ph)LSPMSQRPVLK ddPTM_KYSE-520_SHP099_60min_R1 1 QSLSPMSQRPVLK 13 1 Q9NSV4-7;Q9NSV4-6;Q9NSV4-5;Q9NSV4-4;Q9NSV4;Q9NSV4-1 Q9NSV4-7 DIAPH3 Protein diaphanous homolog 3 1 QS(0.597)LS(0.399)PMS(0.003)QRPVLK 53.777 0.049926 1076700000.0 1446300.0 1365400.0 1492200.0 1130300.0 1319800.0 1283700.0 1202200.0 1313400.0 1637300.0 1345400.0 True False 1366070.8558724283 1299804.1344928183 1588389.5996044166 1237723.3721629127 1423660.7513652204 1275687.952135663 1323730.1083413323 1308844.1219498648 1340007.5929741932 1333480.8027053608 1.0244398367797638 0.9747452920625334 1.191160454940107 0.9281898694393081 1.0676274817581948 0.9566601555474605 0.9926877879724655 0.981524532857531 1.0048945513543133 1.0 20.346765624778342 QS(ph)PGPALAR ddPTM_KYSE-520_SHP099_60min_R1 2 QSPGPALAR 9 0 P85037 P85037 FOXK1 Forkhead box protein K1 1 QS(1)PGPALAR;QS(1)PGPALAR 90.434 0.0040869999999999995 1631530000.0 2010950.0 1871070.0 2043370.0 1736010.0 1979910.0 1933020.0 1818220.0 1969270.0 2581200.0 2149370.0 True False 1899398.5947705598 1781180.988666671 2175088.8997075944 1900999.8684495625 2135717.6528530903 1920955.3051626394 2002023.4217171674 1962439.0620010754 2112519.146756846 2130328.2539845575 0.8915990252760025 0.8361063537204453 1.0210111496382386 0.8923506811187149 1.0025298443366428 0.9017179871551214 0.9397722712321872 0.9211909283607055 0.9916402051212524 1.0 21.02264431616425 -4.744120570377026 24.999314898857484 0.9524357560316459 0.8638526641962104 0.4149873047647651 0.04457599968893542 228.62310904338707 330007.18230574933 0.01046290338341351 0.027540194062894447 1.802517250145815e-05 4.744120570377026 -0.08858309183543545 QS(ph)PLSQERPHR ddPTM_KYSE-520_SHP099_60min_R1 1 QSPLSQERPHR 11 1 Q8NET5 Q8NET5 NFAM1 NFAT activation molecule 1 1 QS(0.981)PLS(0.019)QERPHR 49.928999999999995 0.05352899999999999 362190000.0 217310.0 209900.0 209990.0 196900.0 170190.0 175460.0 156220.0 170930.0 206290.0 140960.0 True False 205255.38110325483 199816.0889336766 223526.29139587953 215613.31679985631 183582.98475136116 174364.88905641757 172012.2421602754 170337.083725362 168832.9361477103 139711.20406522055 1.4691404492329525 1.4302080514630569 1.5999167202906082 1.5432786385492951 1.3140176264293035 1.248037981084322 1.2311986236978958 1.2192084726851582 1.208442352761451 1.0 17.09208819598004 -6.00189627544445 2.2589993519986873 1.1943227171752624 1.5119630240609407 0.7929540783329725 0.07885128020316724 0.1424862504178739 1.4609852313603495 0.028116652015070503 0.030694348888135794 9.956431830137396e-07 6.00189627544445 0.31764030688567835 QS(ph)PNSSSAAASVASR ddPTM_KYSE-520_SHP099_60min_R1 2 QSPNSSSAAASVASR 15 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 QS(0.999)PNSSSAAASVASR;QS(0.939)PNS(0.037)S(0.012)S(0.012)AAASVASR 132.79 2.5763e-05 74262000.0 93504.0 77186.0 71226.0 67027.0 73234.0 82690.0 75499.0 88841.0 100345.0 84670.0 True False 88317.14672439724 73477.86870145204 75817.34192562941 73397.2259275976 78997.099155539 82173.90103770194 83131.17571923335 88532.83130664524 82124.87749159927 83919.88967226316 1.0523982701753651 0.8755715598341358 0.9034490181257737 0.8746106103599481 0.9413394067133621 0.9791945790040965 0.990601584962635 1.0549683948870434 0.9786104082396432 1.0 16.356725160784656 -6.408722000138476 2.054824293510932 1.0109085199908798 0.9206318816393859 0.3406601586935132 0.05039353156703184 0.3452361059926826 2.878917803960509 0.02118324604724757 0.01759680960312615 3.901916755992843e-07 6.408722000138476 -0.09027663835149391 QS(ph)PPISTSK ddPTM_KYSE-520_SHP099_60min_R1 8 QSPPISTSK 9 0 P33981-2;P33981 P33981-2 TTK Dual specificity protein kinase TTK 1 QS(0.923)PPIS(0.014)T(0.044)S(0.02)K;QS(0.878)PPIS(0.085)T(0.025)S(0.013)K;QS(0.996)PPIS(0.004)TSK;QS(0.998)PPIS(0.002)T(0.001)SK;QS(0.922)PPIS(0.076)T(0.002)SK;QS(0.995)PPIS(0.005)TSK;QS(0.983)PPIS(0.012)T(0.004)S(0.001)K;QS(0.97)PPIS(0.023)T(0.006)S(0.001)K 113.42 0.0008868 5225260000.0 14089500.0 12703090.0 11810270.0 12108820.0 12994130.0 13571580.0 13240070.0 13687500.0 14809230.0 13609700.0 True False 13307927.348278087 12092814.488673167 12571578.90130014 13259638.612150514 14016694.1045138 13486874.735098021 14578505.486230941 13640021.257186517 12120247.142308205 13489128.646186389 0.9865668641273184 0.8964859633162455 0.931978575566061 0.9829870379284465 1.039110417890229 0.9998329090671839 1.0807596152886079 1.011186238559804 0.8985196494315302 1.0 23.685293822102825 -5.40424016112927 3.7569706081744023 1.0091636883577433 0.9344062194102083 0.27527778876470776 0.04763435550209136 0.29127322265127087 7.290511860017211 0.01413283353574965 0.021556787615788074 3.9423923086660756e-06 5.40424016112927 -0.07475746894753499 QS(ph)PSFK ddPTM_KYSE-520_SHP099_60min_R1 2 QSPSFK 6 0 Q6IN85-2;Q6IN85;Q6IN85-4 Q6IN85-2 SMEK1 Serine/threonine-protein phosphatase 4 regulatory subunit 3A 1 QS(0.998)PS(0.002)FK;QS(0.924)PS(0.076)FK 83.429 0.019597999999999997 2231800000.0 5626500.0 4864900.0 4870700.0 4546300.0 4698400.0 4774900.0 4690500.0 4623600.0 5841700.0 4765900.0 True False 5314386.828850322 4631182.901636226 5184673.11539554 4978378.985105069 5068137.349760833 4745098.077940775 5164661.514868586 4607561.8107563555 4780994.537273161 4723677.833814087 1.1250527694348014 0.9804188737183253 1.0975924476223704 1.053920093675255 1.072921890117264 1.004534653903226 1.093356002794634 0.9754183017676346 1.0121339146054324 1.0 22.171479142143873 -7.270622704475334 24.982853006736327 0.9953320794202889 1.057414544655177 0.3402134662743366 0.041423349197011676 774.0203148955602 2105677.2037707614 0.020552444729745052 0.010084009261477447 5.3626233581663075e-08 7.270622704475334 0.06208246523488814 QS(ph)PSPS(ph)TRPIR ddPTM_KYSE-520_SHP099_60min_R1 1 QSPSPSTRPIR 11 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 QS(0.942)PS(0.11)PS(0.862)T(0.087)RPIR 104.55 0.003256 3529300000.0 2768800.0 2769700.0 2719600.0 2555800.0 2661600.0 2519100.0 2685000.0 2530700.0 2971800.0 2437900.0 True False 2615209.144534041 2636639.45459554 2894909.767513852 2798702.463570709 2871052.7775675603 2503377.362487302 2956426.003074763 2521921.5923698177 2432196.032981556 2416302.102657502 1.0823187802790788 1.0911878327199676 1.1980744313097136 1.1582585060422017 1.1882010839662447 1.0360365782631373 1.2235332659038043 1.0437112104468034 1.0065777910413491 1.0 21.204369410890603 -7.460640762757418 7.007161167119771 1.010021644935587 1.1386294274845246 0.5243507637762553 0.05445906040235565 0.1910733068385848 18.45190475092229 0.030096861969101815 0.014112218253335826 3.462256483771059e-08 7.460640762757418 0.12860778254893757 QS(ph)PSSSPTR ddPTM_KYSE-520_SHP099_60min_R1 1 QSPSSSPTR 9 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 QS(0.577)PS(0.182)S(0.182)S(0.058)PTR 65.695 0.039080000000000004 124980000.0 260090.0 257570.0 279340.0 290630.0 301370.0 426510.0 456880.0 318230.0 390110.0 382080.0 True False 245662.28922343947 245195.95057954814 297346.70335980266 318251.38781890454 325086.10443926085 423847.99288414815 503065.88911910524 317126.1344054406 319275.85787281656 378695.0684537415 0.6487073893687308 0.6474759536233554 0.7851876829922972 0.8403895754923983 0.8584376494962751 1.1192329348643795 1.3284194356509185 0.8374181784312787 0.8430948392765164 1.0 18.53067710832443 -5.499163318980084 1.2664506363797166 1.0244991498272404 0.6577025531224179 0.5175204860340479 0.13775316626118675 0.40955966959110035 1.331285889713047 0.056197010921863286 0.10726799478562639 3.168375752749244e-06 5.499163318980084 -0.36679659670482256 QS(ph)SFEIPDDVPLPAGWEMAK ddPTM_KYSE-520_SHP099_60min_R1 5 QSSFEIPDDVPLPAGWEMAK 20 0 P46937-6;P46937;P46937-7;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QS(0.5)S(0.5)FEIPDDVPLPAGWEMAK;QS(0.5)S(0.5)FEIPDDVPLPAGWEMAK;QS(0.5)S(0.5)FEIPDDVPLPAGWEMAK;QS(0.5)S(0.5)FEIPDDVPLPAGWEMAK;QS(0.5)S(0.5)FEIPDDVPLPAGWEMAK 117.55 4.7978999999999996e-05 994816000.0 1284640.0 1265029.0 1014668.0 787751.0 895627.0 981312.0 910577.0 1044323.0 1389220.0 1039771.0 True False 1213378.458333651 1204255.10799276 1080075.1228062017 862618.6181940258 966107.7494794502 975187.2678087964 1002627.0095351236 1040700.4872598203 1136972.6673863116 1030559.4378695979 1.177397842129302 1.1685450287876948 1.0480473838937072 0.8370391716340552 0.9374595137148187 0.9462697948065291 0.9728958589790638 1.0098403343054005 1.103257731292718 1.0 19.974996284533038 -4.891366688944677 3.806113578696712 0.9685911376283299 1.173407769929044 0.6082070845980909 0.0635265327615061 0.149957366748178 4.063243800242072 0.018236889053987838 0.04209665443116636 1.2842019086574879e-05 4.891366688944677 0.204816632300714 QS(ph)SPPRNNYSDLR ddPTM_KYSE-520_SHP099_60min_R1 1 QSSPPRNNYSDLR 13 1 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 QS(0.46)S(0.46)PPRNNYS(0.079)DLR 82.48299999999999 0.0076265000000000005 0.0 172910.0 191160.0 174400.0 114410.0 144920.0 159460.0 138560.0 148890.0 231150.0 125550.0 True False 163318.33761246063 181976.38666299023 185642.10304986624 125283.49200137924 156324.37951799325 158464.75099131616 152566.99701528455 148373.53534118715 189178.98681731193 124437.72467642193 1.312450368544915 1.4623892162620886 1.491847456489544 1.0067967115853056 1.2562458846341562 1.2734462270454996 1.2260510019128665 1.1923517223334485 1.520270378691334 1.0 16.925064395218488 -5.227737517231099 24.99969300395283 1.2238991214151014 1.4262450592515974 0.30804522961976355 0.14427773789276516 802.1924253958108 595057.0625449569 0.03786687716363365 0.06558228220903642 5.9191927553359605e-06 5.227737517231099 0.20234593783649601 QS(ph)SS(ph)RFNLSK ddPTM_KYSE-520_SHP099_60min_R1 2 QSSSRFNLSK 10 1 E9PFR3;Q14738;H0Y8C4 E9PFR3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform 2 QS(0.861)S(0.181)S(0.958)RFNLSK;QS(0.526)S(0.477)S(0.994)RFNLS(0.003)K 121.24 0.0010815999999999998 0.0 4472600.0 4102300.0 4027400.0 4435600.0 4360700.0 3860700.0 4526500.0 4753700.0 4689400.0 4351200.0 True False 4224495.962092948 3905219.3503221637 4287012.648067836 4857158.0903882375 4703862.281010994 3836603.939246047 4984082.794382837 4737210.524221927 3837923.1701540165 4312651.753182372 0.9795587967369792 0.9055262455264194 0.9940549094659412 1.1262578961549738 1.0907122926259791 0.8896159854351694 1.1556886759300713 1.0984449464824666 0.8899218832872267 1.0 22.0401437924123 -4.999531304832773 22.361894126645232 1.042565359340468 0.9443544279869112 0.1509700112149398 0.08746102436676062 7.302310890375856 348009.4650768913 0.02280990730067064 0.04658423629630225 1.00107979306242e-05 4.999531304832773 -0.09821093135355685 QS(ph)SSSRDDNMFQIGK ddPTM_KYSE-520_SHP099_60min_R1 1 QSSSSRDDNMFQIGK 15 1 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 QS(0.372)S(0.274)S(0.203)S(0.151)RDDNMFQIGK 92.31 0.0013589000000000001 479130000.0 201110.0 184720.0 229410.0 174950.0 173150.0 202750.0 175400.0 172430.0 238510.0 162470.0 True False 189954.02739715448 175845.77392962726 244198.13566897818 191577.1953993644 186775.91991126508 201484.56204370593 193131.1437390367 171831.8805754644 195202.59634781332 161030.64219974735 1.179614170336163 1.0920019415404354 1.5164699856693569 1.1896940407262748 1.1598781285339625 1.2512187698647956 1.1993440571358518 1.0670756709913563 1.2122077741308268 1.0 17.296975716461713 -8.11070924209632 0.4777441206686809 0.9959829590439464 1.2449283829703106 0.26280400818225447 0.11281202303366338 1.7268014740012096 0.9441511668506589 0.15045344399639796 0.06911414794865535 7.749804695649729e-09 8.11070924209632 0.2489454239263642 QS(ph)TSFLVLQEILESEEKGDPNKPSGFR ddPTM_KYSE-520_SHP099_60min_R1 3 QSTSFLVLQEILESEEKGDPNKPSGFR 27 2 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 QS(0.424)T(0.325)S(0.251)FLVLQEILESEEKGDPNKPSGFR;QS(0.437)T(0.323)S(0.24)FLVLQEILESEEKGDPNKPSGFR;QS(0.411)T(0.327)S(0.262)FLVLQEILESEEKGDPNKPSGFR 126.34 0.000102 581330000.0 410540.0 337960.0 310460.0 278313.0 274565.0 339694.0 306768.0 388176.0 414458.0 345773.0 True False 387766.52780879935 321723.89431169786 330472.74835356337 304763.7838421455 296171.70343884773 337573.84374290885 337779.1032071653 386829.50805695995 339202.87483594834 342709.72022732295 1.131472219555342 0.9387650110953814 0.9642934788495562 0.8892767431282442 0.8642057285168158 0.9850139164975904 0.9856128474649417 1.128738069642063 0.9897673010586088 1.0 18.386627585829594 -7.030991003850908 9.83800701100449 1.047047259509429 0.9560436526877462 0.16861100112100058 0.07552577460216739 0.8224347263378271 254.45082352858626 0.03554050595127177 0.020936103502223885 9.311271630074463e-08 7.030991003850908 -0.09100360682168274 QS(ph)WPTK ddPTM_KYSE-520_SHP099_60min_R1 1 QSWPTK 6 0 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 QS(1)WPTK 67.414 0.045632 279200000.0 915960.0 823950.0 733770.0 864360.0 871010.0 934440.0 996280.0 915660.0 910120.0 962630.0 True False 865149.8728790077 784366.205225835 781069.9882735108 946508.5145206907 939553.5316310185 928607.8133470814 1096993.705155801 912483.7891766501 744865.1502581523 954101.8471148076 0.9067688900249071 0.82209903229697 0.8186442470847919 0.9920413815180433 0.9847518212780082 0.9732795467854718 1.149765833147789 0.9563798581210067 0.7806977342205295 1.0 19.86378375165797 -5.266170612664584 24.56446585071453 0.9822885709607142 0.8464635505884336 0.311790542174329 0.08652114378619045 369.451022053569 1918185.5532203033 0.025256667273155665 0.038885141579522484 5.417880070736385e-06 5.266170612664584 -0.1358250203722806 QSAPS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 3 QSAPSPTR 8 0 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 QS(0.008)APS(0.878)PT(0.114)R;QS(0.001)APS(0.898)PT(0.102)R;QS(0.002)APS(0.73)PT(0.269)R 70.808 0.028594 256370000.0 1810200.0 1846590.0 1591470.0 1214120.0 1425130.0 1648630.0 1410940.0 1575880.0 1939130.0 1684270.0 True False 1709784.597455763 1757877.0446119027 1694058.7026420336 1329509.5997615114 1537279.623119498 1638340.2886417524 1553571.584647411 1570413.6400931585 1587032.8734893084 1669348.6781422317 1.0242225724577392 1.0530316809356999 1.0148021949059205 0.7964241486332759 0.9208858779762479 0.9814248575468443 0.9306453498836051 0.9407343478660342 0.9506898674131218 1.0 20.670853892322004 -5.0232036040166115 24.986286562550205 0.928743461573705 1.0374496135986937 0.44193948566459373 0.051448775155065046 633.5945881714688 682273.1179988838 0.014100068199176686 0.024643231097034514 9.479739341643175e-06 5.0232036040166115 0.10870615202498868 QSCELS(ph)PSKLEK ddPTM_KYSE-520_SHP099_60min_R1 4 QSCELSPSKLEK 12 1 E9PGC0;P20936-2;P20936-4;P20936 E9PGC0 RASA1 Ras GTPase-activating protein 1 1 QSCELS(0.928)PS(0.071)KLEK;QSCELS(0.872)PS(0.128)KLEK;QSCELS(0.976)PS(0.024)KLEK;QSCELS(0.977)PS(0.023)KLEK 151.48 1.0725999999999999e-05 5379610000.0 7145670.0 7105020.0 5603550.0 4993990.0 5404130.0 6607670.0 5411460.0 6415010.0 7634560.0 6383300.0 True False 6749285.440560002 6763684.174347558 5964763.798997009 5468617.30810216 5829404.285706416 6566429.08053927 5958503.187560121 6392757.8275845945 6248316.3555958215 6326748.9281322565 1.0667857247422783 1.0690615750962462 0.9427849700933034 0.8643645212133574 0.921390172413138 1.0378836200281731 0.9417954237231211 1.0104333047197156 0.9876030211681579 1.0 22.59303291413764 -4.756024586148228 24.993233205425867 0.9605225736402789 1.0679237051566557 0.4400796767190578 0.04713095389981333 123.79722354319546 571398.0702125411 0.013114522995512388 0.03263812669261243 1.7537812144981943e-05 4.756024586148228 0.10740113151637676 QSDEVGDRDHR ddPTM_KYSE-520_SHP099_60min_R1 3 QSDEVGDRDHR 11 1 P40222 P40222 TXLNA Alpha-taxilin 0 ;; 97.911 0.0018899999999999998 315555000.0 212658.0 206136.0 168322.0 140543.0 202612.0 196145.0 131545.0 162456.0 185390.0 148316.0 False True 200861.43681678726 196232.91714355614 179172.30544472244 153900.16446420643 218556.4116954155 194920.78629870652 144842.85235548223 161892.4780535154 151727.84930158526 147002.03562810193 1.366385410641138 1.3348993182652424 1.218842342414955 1.0469253966901244 1.4867577225143862 1.3259733817008728 0.9853118818158261 1.1012941240016876 1.0321479471579502 1.0 17.165476607527253 -6.758839586997312 24.999992448131138 1.0381296434020912 1.2921261808514026 0.5868082902812402 0.10960572739363435 54.67291692209002 525749.6784054781 0.04559584471421566 0.03366915240792904 1.742450354003179e-07 6.758839586997312 0.2539965374493114 QSFDDNDS(ph)EELEDKDSK ddPTM_KYSE-520_SHP099_60min_R1 10 QSFDDNDSEELEDKDSK 17 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK;QSFDDNDS(1)EELEDKDSK 267.81 7.985e-30 27393200000.0 17227340.0 15056410.0 15297970.0 13803470.0 15004460.0 13188970.0 14181600.0 15480550.0 17869930.0 14005990.0 True False 16271705.10834911 14333077.463467842 16284101.62381745 15115347.638635399 16185225.638300791 13106652.746029973 15615214.527078213 15426851.585237518 14625201.176276358 13881907.825095346 1.1721519342560072 1.0325005499285107 1.1730449322231833 1.0888523270058221 1.16592228116092 0.9441535638448854 1.1248608421710913 1.1112918901067232 1.0535440344761047 1.0 23.726702518918778 QSFTMVADT(ph)PENLR ddPTM_KYSE-520_SHP099_60min_R1 6 QSFTMVADTPENLR 14 0 Q14847;Q14847-2;C9J9W2;F6S2S5 Q14847 LASP1 LIM and SH3 domain protein 1 1 QSFTMVADT(1)PENLR;QSFTMVADT(1)PENLR;QSFTMVADT(1)PENLR;QSFTMVADT(1)PENLR;QSFT(0.018)MVADT(0.982)PENLR;QSFTMVADT(1)PENLR 346.18 1.3842999999999998e-53 6297780000.0 7075160.0 8052090.0 6404160.0 5451950.0 5663690.0 6798630.0 5368450.0 6635560.0 8101240.0 7277680.0 True False 6682686.770818214 7665255.509966507 6816982.400618303 5970101.688811464 6109390.181012026 6756197.228346257 5911145.317022975 6612542.791111349 6630259.031641271 7213205.417149358 0.9264517484737314 1.0626697933407527 0.9450697722278867 0.8276627856206034 0.846972992961906 0.9366428429008042 0.8194893913556458 0.916727364423875 0.9191834487172463 1.0 22.7822090786883 -5.001624520332245 24.976014668090386 0.8881769825823803 0.9968880454987155 0.3034080305119542 0.05999673687553375 62.53292293822208 961472.583143835 0.014914535807092733 0.03036535541509936 9.962663910150899e-06 5.001624520332245 0.10871106291633514 QSGLSSLVNGKS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 3 QSGLSSLVNGKSPIR 15 1 H0Y612;Q9UPN9-2;Q9UPN9 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 1 QSGLSSLVNGKS(1)PIR;QSGLSSLVNGKS(1)PIR;QSGLSSLVNGKS(1)PIR 274.45 3.002e-25 6643700000.0 4361500.0 3964500.0 3477500.0 2940520.0 2881350.0 3511300.0 3087690.0 3356700.0 4359000.0 3658200.0 True False 4119558.90056531 3774039.469164177 3701665.2141967267 3219986.1367004206 3108095.8523610956 3489384.674249396 3399823.8381504267 3345056.391159669 3567515.4814478136 3625791.1940365294 1.1361820579576944 1.0408871518501883 1.020926196821535 0.8880782053849237 0.8572186554683827 0.9623788264444224 0.937677780160711 0.9225728157378188 0.9839274493565531 1.0 21.78986441332461 -4.728662333335713 1.7270768129716707 0.9320528800128093 1.1268508595433586 0.6695448874506038 0.04410408706114164 0.25610271732924467 1.341994910995563 0.012984896500743881 0.06169931154059517 1.867831376941703e-05 4.728662333335713 0.19479797953054934 QSHAASAAPQAS(ph)SPPDYTMAWAEYYR ddPTM_KYSE-520_SHP099_60min_R1 1 QSHAASAAPQASSPPDYTMAWAEYYR 26 0 Q96I24 Q96I24 FUBP3 Far upstream element-binding protein 3 1 QSHAASAAPQAS(0.499)S(0.499)PPDY(0.001)TMAWAEYYR 138.84 1.3761e-06 443310000.0 264490.0 331820.0 302920.0 538910.0 226400.0 277150.0 245590.0 233820.0 332510.0 236120.0 True False 249818.21245225667 315878.8691280262 322446.7078891369 590127.8443708002 244216.39196021037 275420.20404642733 270416.63392742316 233008.93299399805 272134.56589497905 234028.16049858026 1.0674707348040375 1.3497472631287997 1.3778115727705045 2.5216104041222005 1.043534211609085 1.176867790011528 1.1554875847048487 0.9956448510195918 1.1628282908997611 1.0 17.836322613507193 QSHAASAAPQASS(ph)PPDYTMAWAEYYR ddPTM_KYSE-520_SHP099_60min_R1 2 QSHAASAAPQASSPPDYTMAWAEYYR 26 0 Q96I24 Q96I24 FUBP3 Far upstream element-binding protein 3 1 QSHAASAAPQAS(0.176)S(0.824)PPDYTMAWAEYYR;QSHAASAAPQAS(0.052)S(0.948)PPDYTMAWAEYYR 250.43 1.3752999999999998e-29 3299800000.0 754920.0 1036460.0 1023310.0 1690940.0 682490.0 774750.0 862720.0 666700.0 903450.0 844590.0 True False 713043.0827042891 986666.9058418216 1089274.199953891 1851646.4292003505 736198.0801630922 769914.4978710787 949932.1569358138 664387.3733089499 739406.2541211351 837107.5896810767 0.8517938333063567 1.1786619999679184 1.3012356038593385 2.2119575213812066 0.879454551885703 0.9197318329946125 1.1347790518751852 0.7936702300860392 0.8832870030515861 1.0 19.675053532247205 QSHSES(ph)PSLQSK ddPTM_KYSE-520_SHP099_60min_R1 14 QSHSESPSLQSK 12 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QS(0.012)HS(0.005)ES(0.982)PS(0.001)LQSK;QSHS(0.016)ES(0.983)PS(0.001)LQSK;QSHS(0.023)ES(0.951)PS(0.026)LQSK;QSHSES(1)PSLQSK;QSHSES(0.795)PS(0.205)LQSK;QSHSES(0.901)PS(0.098)LQSK;QSHS(0.001)ES(0.998)PS(0.001)LQSK;QSHSES(1)PSLQSK;QSHSES(1)PSLQSK;QSHSES(1)PSLQSK;QSHS(0.002)ES(0.998)PSLQSK;QSHS(0.002)ES(0.998)PSLQSK;QSHSES(0.988)PS(0.011)LQSK;QSHSES(0.915)PS(0.085)LQSK 314.06 2.5605e-39 48146190000.0 31027760.0 30112340.0 28161560.0 31285060.0 27158680.0 27376760.0 28476590.0 28082770.0 33105530.0 26315820.0 True False 29306588.300493866 28665697.986856166 29976899.217689138 34258382.69620373 29295913.604248792 27205891.48594653 31355281.62193623 27985357.425437782 27094400.274497587 26082682.30819817 1.1236033148048725 1.0990318268702801 1.1493027773553397 1.3134532059011361 1.12319405105972 1.043063407531338 1.2021494281698477 1.0729478316208902 1.03878887739937 1.0 24.636588906240217 -7.602562399308474 2.1886405332467294 1.0088289609370669 1.1500148308691494 0.38069552690057773 0.06792681709019913 0.3609296001890321 3.170665426580968 0.06355367434155819 0.01975490625089669 2.4971095793789716e-08 7.602562399308474 0.1411858699320825 QSHSGS(ph)IS(ph)PYPK ddPTM_KYSE-520_SHP099_60min_R1 2 QSHSGSISPYPK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 QS(0.008)HS(0.17)GS(0.827)IS(0.906)PY(0.089)PK;QSHS(0.007)GS(0.993)IS(1)PYPK 142.54 0.00016554 1055190000.0 1712540.0 1539630.0 1508370.0 1446810.0 1592090.0 1545180.0 1471130.0 1575470.0 1828710.0 1511970.0 True False 1617541.9923361456 1465663.863768254 1605601.9436773313 1584314.3874007117 1717378.4252470457 1535535.9584645808 1619846.1772452055 1570005.0622874608 1496662.362027627 1498575.1220948617 1.0793866576905267 0.9780382992875252 1.0714190566788915 1.057213858712665 1.1460075640694731 1.0246639863592901 1.0809242415427387 1.0476652382249259 0.9987236141591882 1.0 20.51515997586984 -7.699633222145429 3.951154819450081 0.9980179016327874 1.0613311044037144 0.2744578535375709 0.040383903259977524 0.2966718558988031 8.821912309732783 0.033407491858262486 0.0105254288644039 1.9969481000121942e-08 7.699633222145429 0.063313202770927 QSHSGSIS(ph)PYPK ddPTM_KYSE-520_SHP099_60min_R1 12 QSHSGSISPYPK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 QSHSGSIS(0.997)PY(0.003)PK;QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK;QSHS(0.042)GS(0.007)IS(0.951)PYPK;QSHSGS(0.01)IS(0.99)PYPK;QSHSGSIS(1)PYPK;QSHSGS(0.306)IS(0.694)PYPK;QSHSGS(0.002)IS(0.998)PYPK;QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK;QSHSGSIS(1)PYPK 242.35 2.8896e-17 45792760000.0 27226450.0 31045000.0 26610840.0 44060800.0 25100700.0 25060730.0 27022320.0 25206260.0 32461200.0 23785930.0 True False 25716144.543917485 29553551.60050495 28326217.325249393 48248325.18463744 27075982.286553223 24904316.688264232 29753999.818028703 25118825.36724529 26567064.36026008 23575205.165373504 1.0908131812014312 1.2535861890997346 1.201525803340792 2.046570744398145 1.1484940256775176 1.0563775166988953 1.2620886906100148 1.0654764270785226 1.1269070268487387 1.0 24.490766990351737 -5.9650111790250175 24.999879197271262 1.1147200866634317 1.4017288962144805 0.24559850051902354 0.24806705747134963 277.02687257123 197937.4505079111 0.07923461098443406 0.08984332697677909 1.0838990133900826e-06 5.9650111790250175 0.2870088095510488 QSKPVTTPEEIAQVATISANGDKEIGNIISDAMK ddPTM_KYSE-520_SHP099_60min_R1 2 QSKPVTTPEEIAQVATISANGDKEIGNIISDAMK 34 2 P10809;E7EXB4;E7ESH4 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 113.7 0.00014065 318660000.0 235755.0 236152.0 169830.0 240516.0 226623.0 216245.0 182652.0 209513.0 233678.0 141393.0 False True 222677.20018405927 224806.90344862145 180777.51353760756 263374.56832622795 244456.9407915137 214895.33474299035 201116.2466717361 208786.2483037017 191247.96574300595 140140.36802208942 1.5889582946504044 1.604155223947939 1.2899745882579157 1.8793626136668482 1.7443720481237894 1.5334292165489232 1.43510574083861 1.4898365920574155 1.3646886221453391 1.0 17.096513064441915 -8.200873414561228 0.7204587599781005 0.997375444996935 1.6068653651203708 0.6058241091256311 0.14586251902058658 0.6907030961693482 0.7638744378100256 0.15496674899723575 0.05803688934431479 6.2968969412443845e-09 8.200873414561228 0.6094899201234358 QSLPAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 QSLPASPR 8 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;H0YF21 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 QSLPAS(1)PR 72.817 0.036142 0.0 1300700.0 1049200.0 1114300.0 1056800.0 930170.0 883130.0 1024500.0 1069900.0 1462800.0 1236400.0 True False 1228547.5781188332 998794.8571186922 1186129.5609430384 1157237.9542614953 1003369.0870566642 877618.0580895601 1128066.4581564583 1066188.7666165382 1197192.394187168 1225446.4579046445 1.0025306044129347 0.8150456926747356 0.9679162669996754 0.9443398744978405 0.8187783975256626 0.716161895469651 0.9205350840748331 0.8700410856297904 0.9769438611248774 1.0 20.224876020805212 -7.8253750202004255 4.389511703938772 0.997936141816098 0.8780921152607571 0.22220785958289335 0.07978236320322961 0.32003472257796656 11.383797419286529 0.07754205152442657 0.020827678121518083 1.494944190461547e-08 7.8253750202004255 -0.11984402655534088 QSLS(ph)PMSQRPVLK ddPTM_KYSE-520_SHP099_60min_R1 7 QSLSPMSQRPVLK 13 1 Q9NSV4-7;Q9NSV4-6;Q9NSV4-5;Q9NSV4-4;Q9NSV4;Q9NSV4-1 Q9NSV4-7 DIAPH3 Protein diaphanous homolog 3 1 QSLS(0.995)PMS(0.005)QRPVLK;QS(0.04)LS(0.958)PMS(0.002)QRPVLK;QS(0.015)LS(0.838)PMS(0.147)QRPVLK;QSLS(0.698)PMS(0.302)QRPVLK;QSLS(0.996)PMS(0.004)QRPVLK;QSLS(0.999)PMS(0.001)QRPVLK;QS(0.205)LS(0.764)PMS(0.031)QRPVLK 171.11 2.3894e-06 7739830000.0 8575490.0 7870620.0 7324440.0 6183770.0 6764800.0 7452370.0 6765250.0 7335950.0 8845660.0 7535940.0 True False 8099790.474884499 7492503.601158532 7796585.121918353 6771473.6415817635 7297151.273553146 7405856.994513706 7449147.4924772885 7310503.30167361 7239511.124942349 7469177.4344726 1.0844287133281132 1.0031229900334506 1.0438345039086452 0.9065889384725667 0.9769685266645964 0.9915224346302647 0.9973183202339166 0.9787561436060336 0.9692514588727978 1.0 22.832517939975922 -4.157995425634674 1.204317734159958 0.9778630466338957 1.145690058857226 0.5006098516404194 0.031253061702366886 1.5789927530172367 1.6684614422305792 0.009452035004518635 0.3508861879518334 6.950316382249442e-05 4.157995425634674 0.1678270122233304 QSMAFSILNT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 QSMAFSILNTPK 12 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 QSMAFS(0.002)ILNT(0.998)PK;QSMAFSILNT(1)PK;QSMAFSILNT(1)PK;QSMAFSILNT(1)PK 246.34 7.6342e-15 7147880000.0 3170050.0 4721480.0 3461680.0 3042600.0 3169580.0 3677720.0 3137020.0 3607050.0 4534980.0 4500920.0 True False 2994201.007161995 4494653.01371403 3684825.4316838337 3331767.78920895 3419007.9135567253 3654765.9852990313 3454140.595964837 3594537.985441796 3711541.949542602 4461045.350462768 0.6711882018530456 1.0075335847567153 0.8260004420940458 0.7468580853730455 0.7664140677704729 0.8192622352336998 0.774289504948996 0.8057613637729362 0.8319892890480443 1.0 22.08895038377845 -10.384232640005411 3.3711879908781204 1.0016017732162517 0.8086473412945641 0.3390893136260107 0.08136323292947646 85936846.78560759 104385655.08972102 1309206.5638015177 0.019536534033146393 4.128263026774846e-11 10.384232640005411 -0.1929544319216876 QSMDMS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 10 QSMDMSPIK 9 0 F5H658;Q14562 F5H658 DHX8 ATP-dependent RNA helicase DHX8 1 QSMDMS(1)PIK;QS(0.002)MDMS(0.998)PIK;QSMDMS(1)PIK;QSMDMS(1)PIK;QSMDMS(1)PIK;QSMDMS(1)PIK;QSMDMS(1)PIK;QSMDMS(1)PIK;QSMDMS(1)PIK;QSMDMS(1)PIK 176.87 4.4641e-05 21939770000.0 26802400.0 24543400.0 20939400.0 20076090.0 21892800.0 23412800.0 21535240.0 24122400.0 27697500.0 24147700.0 True False 25315617.442740206 23364298.22360556 22289187.228224587 21984115.55750346 23615638.80700749 23266672.030662827 23712232.22288851 24038725.024610464 22668332.197155487 23933770.164626345 1.0577362976500964 0.9762063420387292 0.9312860896929469 0.9185395951531098 0.9867078460505547 0.9721273276472975 0.9907437089846687 1.0043852205173776 0.9471275123490092 1.0 24.512544339373896 QSNASS(ph)DVEVEEK ddPTM_KYSE-520_SHP099_60min_R1 5 QSNASSDVEVEEK 13 0 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QSNAS(0.006)S(0.994)DVEVEEK;QSNAS(0.021)S(0.979)DVEVEEK;QSNAS(0.058)S(0.942)DVEVEEK;QSNAS(0.024)S(0.976)DVEVEEK;QSNAS(0.189)S(0.811)DVEVEEK 345.11 2.5564999999999993e-71 4185210000.0 8376560.0 7430760.0 7243590.0 7600790.0 7370890.0 7491210.0 8021610.0 8271030.0 8812840.0 7413640.0 True False 7911895.518541619 7073775.135801846 7710523.401553789 8323166.79633915 7950937.108372773 7444454.579666741 8832512.62216929 8242339.727402919 7212650.409617461 7347960.917324635 1.076747087737956 0.9626854600061456 1.0493419178883114 1.1327178913969487 1.0820603427035753 1.013132032604392 1.2020358738360266 1.121717959600134 0.9815852983937154 1.0 22.80891252232054 -5.001149117983767 24.900194223141572 1.0846443948977489 1.0162906193182575 0.08963061546275719 0.06848453366838038 78.18239219546282 1694317.673071008 0.017715661168059213 0.03610719039836126 9.973575554795253e-06 5.001149117983767 -0.0683537755794914 QSPGS(ph)TSPKPPHTLSR ddPTM_KYSE-520_SHP099_60min_R1 1 QSPGSTSPKPPHTLSR 16 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 QSPGS(0.722)T(0.173)S(0.105)PKPPHTLSR 126.91 5.5733e-05 1774500000.0 1148700.0 1222000.0 925280.0 1746600.0 1092800.0 931900.0 1101800.0 918820.0 1308900.0 961410.0 True False 1084979.3211233206 1163293.285740604 984925.0293003435 1912596.338865564 1178797.14281854 926083.6664292463 1213180.6965317589 915632.8278742012 1071236.754683882 952892.6553656614 1.1386165220330853 1.2208020275843177 1.033615931190476 2.007147739145526 1.2370723356726792 0.9718656778542097 1.2731556799188624 0.9608981900724567 1.1241945760121401 1.0 19.861954176196157 -6.004854857078993 24.94783620787976 1.0796296451549579 1.356198971271242 0.21302347089924556 0.2578678036082714 354.22873523563953 1820303.1572725242 0.08327188614296355 0.09198297767254934 9.888835281955123e-07 6.004854857078993 0.27656932611628404 QSPGSTS(ph)PKPPHTLSR ddPTM_KYSE-520_SHP099_60min_R1 1 QSPGSTSPKPPHTLSR 16 1 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 QSPGS(0.038)T(0.134)S(0.828)PKPPHTLSR 130.37 3.5851999999999995e-05 2066100000.0 633090.0 663200.0 508410.0 1099000.0 674680.0 574370.0 585920.0 579260.0 744160.0 487700.0 True False 597971.235666374 631338.8765165053 541182.9220847621 1203448.629573602 727773.4775959137 570785.1437782669 645150.5116281426 577250.682260301 609039.3027470073 483379.3574248588 1.2370640708614216 1.3060939959866755 1.1195821951682927 2.489656645630917 1.5055948633657694 1.1808223396610296 1.33466707197655 1.1941980421661562 1.2599613396641216 1.0 18.882796338982857 -6.227353379585512 6.79375707015621 1.2147393580381403 1.55067799263908 0.1790160815105185 0.3593513156456117 0.425279722717592 65.07996871266525 0.1269454469719929 0.12511660665843052 5.924430654393849e-07 6.227353379585512 0.33593863460093965 QSPS(ph)PS(ph)TRPIR ddPTM_KYSE-520_SHP099_60min_R1 5 QSPSPSTRPIR 11 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 QS(0.014)PS(0.989)PS(0.995)T(0.003)RPIR;QS(0.1)PS(0.905)PS(0.943)T(0.052)RPIR;QS(0.044)PS(0.958)PS(0.985)T(0.014)RPIR;QS(0.32)PS(0.682)PS(0.978)T(0.02)RPIR;QS(0.236)PS(0.766)PS(0.829)T(0.168)RPIR 153.0 0.00018309 5588810000.0 6392810.0 5871410.0 6183580.0 5451740.0 5798190.0 5926670.0 5903010.0 5652940.0 6931400.0 5530820.0 True False 6038188.085549212 5589338.650433912 6582183.460877817 5969871.730474601 6254474.565811712 5889679.454143387 6499743.858625834 5633331.270546113 5672832.4863747135 5481821.237712854 1.1014930665758973 1.0196134474399456 1.2007293152127778 1.0890307201927973 1.1409482897368664 1.0744019548876609 1.1856905901837984 1.027638630714721 1.0348444869649844 1.0 22.386223851944234 -7.386665608549996 8.95478198486136 1.0221056269162383 1.1138152520852245 0.428894394044397 0.05030446582042847 0.3219531026417572 21.870529340896113 0.02663872067445264 0.012742456482383355 4.1052006731868916e-08 7.386665608549996 0.09170962516898618 QSPS(ph)SSPTR ddPTM_KYSE-520_SHP099_60min_R1 1 QSPSSSPTR 9 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 QS(0.024)PS(0.531)S(0.222)S(0.222)PT(0.002)R 76.682 0.015194 229220000.0 358060.0 318250.0 369530.0 424170.0 360120.0 411060.0 483330.0 305810.0 518450.0 381820.0 True False 338197.698025086 302960.7922970109 393350.495068905 464482.9892686387 388459.3951974868 408494.4220650353 532189.7132462291 304749.2164865903 424312.54906093585 378437.37185146526 0.8936688688289139 0.8005572779844837 1.0394071102028821 1.2273708249166944 1.026482647041411 1.0794241067326915 1.4062821297023247 0.8052830908206465 1.121222639785894 1.0 18.529695040710568 -4.86893990776179 4.970433973391333 1.0988203128529983 0.8488853140829006 0.3031653472207493 0.1476952494771385 0.23251726703906042 9.099883109645743 0.03832681676985782 0.08419991273874562 1.3522596590274138e-05 4.86893990776179 -0.24993499877009773 QSPSSS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 1 QSPSSSPTR 9 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 QS(0.002)PS(0.051)S(0.127)S(0.787)PT(0.033)R 61.363 0.062103 0.0 503630.0 423800.0 491580.0 587040.0 489020.0 582070.0 635400.0 402370.0 749510.0 510550.0 True False 475692.63993848534 403440.0118632307 523268.0333558097 642832.1050999889 527503.0918568105 578437.0852220965 699632.4329064066 400974.27238386415 613417.877609532 506026.9242018901 0.9400540113329973 0.7972698537721875 1.0340715253069042 1.270351584777567 1.0424407608128614 1.1430954709265961 1.3825992243592031 0.7923971101266679 1.2122237933821798 1.0 18.94885462295157 -4.940779822306394 5.488336545046865 1.122802407207204 0.8733583245676991 0.2930599001100579 0.15457413949285304 0.2295706829786156 13.988785494561569 0.03951099539677093 0.08408523878965532 1.146093838401008e-05 4.940779822306394 -0.2494440826395049 QSQQPMKPIS(ph)PVKDPVS(ph)PAS(ph)QK ddPTM_KYSE-520_SHP099_60min_R1 2 QSQQPMKPISPVKDPVSPASQK 22 2 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 3 QSQQPMKPIS(1)PVKDPVS(1)PAS(1)QK;QSQQPMKPIS(1)PVKDPVS(1)PAS(1)QK 95.87799999999999 0.0011771 1963960000.0 3395700.0 2932070.0 2766820.0 3033590.0 2849700.0 3063900.0 2805410.0 3274820.0 3478270.0 3116750.0 True False 3207333.751839869 2791208.956073202 2945173.644268522 3321901.481517905 3073955.1774249584 3044777.0636039986 3089008.2209631116 3263460.413768735 2846703.8480512723 3089138.0197948087 1.0382617193818071 0.9035559234283109 0.9533965868136092 1.075349000346238 0.9950850877259091 0.9856396975769453 0.999957982184394 1.0564307560416175 0.9215204467427326 1.0 21.558772899993574 QSQQPMKPIS(ph)PVKDPVS(ph)PASQK ddPTM_KYSE-520_SHP099_60min_R1 8 QSQQPMKPISPVKDPVSPASQK 22 2 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 QSQQPMKPIS(1)PVKDPVS(0.968)PAS(0.032)QK;QSQQPMKPIS(1)PVKDPVS(0.952)PAS(0.048)QK;QSQQPMKPIS(1)PVKDPVS(0.977)PAS(0.023)QK;QS(0.005)QQPMKPIS(0.995)PVKDPVS(0.993)PAS(0.007)QK;QSQQPMKPIS(1)PVKDPVS(0.993)PAS(0.007)QK;QSQQPMKPIS(1)PVKDPVS(0.996)PAS(0.004)QK;QSQQPMKPIS(1)PVKDPVS(0.998)PAS(0.002)QK;QS(0.001)QQPMKPIS(0.999)PVKDPVS(0.966)PAS(0.033)QK 157.96 2.476e-08 38510280000.0 22814320.0 19824350.0 19196690.0 19068550.0 18774430.0 18639780.0 19738500.0 19662530.0 23594830.0 18768170.0 True False 21548764.190380596 18871958.469044 20434139.35319 20880819.258831386 20251870.829105716 18523442.218944687 21733860.209195968 19594325.272699 19310603.649261132 18601898.61521529 1.15841746243875 1.014517865053184 1.098497512317159 1.1225101098955603 1.088699129482452 0.9957823447007484 1.1683678456036155 1.0533508260641717 1.038098532236175 1.0 24.148946542693537 -7.811502012474384 2.3640406214712 1.0046202572310312 1.087661363001704 0.24135307894111768 0.05229513551265782 0.40487153316359764 4.394461665056268 0.047317884493669506 0.013336151790406287 1.543469271035712e-08 7.811502012474384 0.08304110577067281 QSQQPMKPIS(ph)PVKDPVSPASQK ddPTM_KYSE-520_SHP099_60min_R1 2 QSQQPMKPISPVKDPVSPASQK 22 2 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 QSQQPMKPIS(1)PVKDPVSPASQK;QSQQPMKPIS(1)PVKDPVSPASQK 185.02 1.0044e-13 5909800000.0 6210800.0 6800000.0 4659260.0 4437570.0 4548060.0 7459800.0 4709580.0 6287750.0 7107400.0 6790200.0 True False 5866274.54307715 6473317.79299191 4959603.354679585 4859315.318595925 4905966.447078422 7413240.621127689 5185670.30747144 6265939.262821883 5816875.322973655 6730044.110695663 0.8716546944698662 0.9618536946443259 0.7369347470988459 0.7220332049344672 0.7289649765120645 1.101514417913883 0.7705254560263817 0.9310398505210085 0.8643145910038297 1.0 22.682184530039905 -6.202747420023782 24.999895267706226 0.9189866408689196 0.8047303495297935 0.26746885952251565 0.10554468484498922 428.99170033011023 182729.10920045982 0.03576668949956987 0.03576667957951098 6.269784010744056e-07 6.202747420023782 -0.11425629133912607 QSS(ph)FEIPDDVPLPAGWEMAK ddPTM_KYSE-520_SHP099_60min_R1 1 QSSFEIPDDVPLPAGWEMAK 20 0 P46937-6;P46937;P46937-7;P46937-9;P46937-5;P46937-3;P46937-2;P46937-8 P46937-6 YAP1 Transcriptional coactivator YAP1 1 QS(0.142)S(0.858)FEIPDDVPLPAGWEMAK 162.73 5.3852e-10 39019000.0 73171.0 80579.0 60099.0 49076.0 56522.0 65844.0 57133.0 66514.0 87063.0 64746.0 True False 69112.05876722769 76707.86388845515 63973.07770179987 53740.16828476259 60969.959833811896 65433.04317240828 62908.5612043465 66283.27845848423 71254.55387962633 64172.40081162574 1.0769748037026388 1.1953404098691354 0.9968939433883584 0.8374342802369769 0.9500962884774341 1.0196446189458157 0.9803055582883806 1.0328938549931277 1.110361354389558 1.0 15.969665337749955 -4.814879357693092 8.806721936124154 0.9855514517131801 1.1358620187121438 0.40361128471169516 0.0703768700925022 0.2623306240212796 39.998916849582855 0.019718794262507396 0.04142559381051245 1.5315128402886964e-05 4.814879357693092 0.1503105669989636 QSS(ph)FEPEFVISPR ddPTM_KYSE-520_SHP099_60min_R1 1 QSSFEPEFVISPR 13 0 A0A0A0MSU3;Q9H9A7 A0A0A0MSU3 RMI1 RecQ-mediated genome instability protein 1 1 QS(0.056)S(0.944)FEPEFVISPR 95.662 0.0020018 87767000.0 137190.0 122710.0 125430.0 125350.0 119720.0 158050.0 150380.0 148930.0 180040.0 135670.0 True False 129579.79721851522 116814.82740853485 133515.41849509586 137263.2263121483 129141.28288637973 157063.55132432946 165581.87796736776 148413.39659052325 147349.2744390603 134468.0693496629 0.9636473390687532 0.8687179638518971 0.9929154121184723 1.020786770985884 0.9603862352672611 1.168036040704285 1.2313843633524502 1.1037073508105313 1.0957937832505193 1.0 17.036904106996584 -6.254410396289724 24.72624513817051 1.1332410217676951 0.9612100625138214 0.5845686859512963 0.06632234594979851 330.0444331341242 1161016.2288142506 0.02274998818916667 0.022268169097041435 5.566594724867661e-07 6.254410396289724 -0.1720309592538738 QSS(ph)PAMPHK ddPTM_KYSE-520_SHP099_60min_R1 1 QSSPAMPHK 9 0 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 1 QS(0.092)S(0.908)PAMPHK 99.75200000000001 0.0025589000000000002 420180000.0 257120.0 289820.0 292420.0 297060.0 243740.0 249730.0 245890.0 270650.0 327010.0 246090.0 True False 242857.0410439874 275896.612171311 311269.86108854297 325292.4930856545 262920.95130910596 248171.34243736026 270746.960855141 269711.17832018493 267633.22725126136 243909.8340551226 0.9956836795235683 1.1311418141056153 1.2761677375345075 1.3336587856155884 1.0779432175321269 1.0174716546331404 1.1100288838454677 1.1057823042068544 1.097262963127503 1.0 17.89598840090442 -5.947967527230439 24.99970753558407 1.0723805040094503 1.1893044503227073 0.28501490173374355 0.0898117122743595 143.38926134872003 68892.53238058377 0.02996668344836914 0.03397902062135617 1.1272817413627255e-06 5.947967527230439 0.11692394631325698 QSS(ph)PSGSEQLVR ddPTM_KYSE-520_SHP099_60min_R1 2 QSSPSGSEQLVR 12 0 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 QS(0.007)S(0.993)PSGSEQLVR;QS(0.024)S(0.976)PSGSEQLVR 222.56 3.3144e-17 1113300000.0 2075990.0 2022990.0 1751310.0 1494310.0 1687050.0 1979290.0 1651460.0 1935240.0 2288800.0 1994060.0 True False 1960830.696316537 1925802.5238301014 1864202.244795076 1636328.773119316 1819811.2369985536 1966936.5169296544 1818405.693496404 1928527.1041284131 1873211.6159526873 1976394.1797552037 0.9921253140703975 0.9744020416355564 0.9432340288646146 0.8279364460190789 0.9207734244714056 0.9952146879795403 0.9200622588969736 0.9757806028184522 0.9477925178795575 1.0 20.914439281663913 -6.231448168247415 24.68932340358657 0.9632745759769957 0.9289436788549733 0.1282914536196652 0.04600449754700716 1497.9568145013563 1233147.327460794 0.01640496828285805 0.016402592873638475 5.868834082255953e-07 6.231448168247415 -0.03433089712202242 QSS(ph)QDNELK ddPTM_KYSE-520_SHP099_60min_R1 1 QSSQDNELK 9 0 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 QS(0.087)S(0.913)QDNELK 85.973 0.040261 0.0 1255100.0 1097200.0 1079800.0 1078800.0 1149300.0 1157500.0 1199700.0 1164700.0 1323600.0 1186800.0 True False 1185477.1010201804 1044488.8650692251 1149405.6357410874 1181328.8276469521 1239743.3713775177 1150275.613147176 1320977.383943685 1160659.9275430238 1083267.6052407264 1176285.8753164294 1.0078137686566018 0.8879549495468098 0.9771482084930153 1.0042871825942534 1.053947341707234 0.9778878054093302 1.1230070951828208 0.9867158587029687 0.9209220547252763 1.0 20.165807293427257 -5.121145366257746 3.5569593555301724 1.0142546572596183 0.945302282901423 0.15537007962483784 0.056467905961108976 0.38568721824469004 8.843697540688185 0.015724646773735963 0.029783118119532943 7.565796116848518e-06 5.121145366257746 -0.06895237435819523 QSS(ph)S(ph)RFNLSK ddPTM_KYSE-520_SHP099_60min_R1 2 QSSSRFNLSK 10 1 E9PFR3;Q14738;H0Y8C4 E9PFR3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform 2 QS(0.163)S(0.853)S(0.983)RFNLSK;QS(0.296)S(0.82)S(0.884)RFNLSK 119.17 0.0017569000000000003 2494920000.0 2862100.0 2598400.0 2632400.0 2880300.0 2785300.0 2420800.0 2648400.0 2959300.0 3236300.0 2782700.0 True False 2703333.607545099 2473568.9637220865 2802088.7159889177 3154042.8460062277 3004487.2638108386 2405690.889249836 2916126.11789318 2949034.8790058126 2648669.5004839567 2758047.442907843 0.9801621123293448 0.8968551175878877 1.0159682797314906 1.143578169446165 1.0893530028051914 0.8722442013954216 1.0573154299400567 1.0692473353165417 0.9603422549147422 1.0 21.395215843093826 -4.876359489625042 6.796973523355847 1.0314668009027341 0.9394359390089979 0.1873326537353589 0.0727562213442475 0.33182315827131925 18.258966675365652 0.019790155438961135 0.041872091686707025 1.3293535827543966e-05 4.876359489625042 -0.09203086189373622 QSS(ph)SEQCS(ph)DGEGR ddPTM_KYSE-520_SHP099_60min_R1 2 QSSSEQCSDGEGR 13 0 O60343-2;A0A3B3IRT3;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 2 QS(0.216)S(0.748)S(0.04)EQCS(0.996)DGEGR;QS(0.189)S(0.789)S(0.055)EQCS(0.967)DGEGR 73.273 0.017896000000000002 87795000.0 209108.0 156219.0 206449.0 215522.0 195347.0 216692.0 303770.0 212113.0 278107.0 216116.0 True False 197508.36239353666 148714.00475050032 219757.03287007925 236005.1460809479 210719.69752761105 215339.54485018377 334478.0361095045 211377.22951054646 227609.7793069527 214201.38037570388 0.9220685788630864 0.6942719252773238 1.0259365858643437 1.1017909672990938 0.9837457497146561 1.0053135253959782 1.5615120477881066 0.9868154404037736 1.0625971639759315 1.0 17.708608251699424 -4.921325548733596 5.211625573796442 1.1071343977404065 0.8108779341135413 0.3151424596067416 0.1692803378551465 0.2310548164314281 10.972853074480268 0.04564965691567303 0.09825526028772762 1.1986004909988726e-05 4.921325548733596 -0.2962564636268652 QSSFEPEFVIS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 QSSFEPEFVISPR 13 0 A0A0A0MSU3;Q9H9A7 A0A0A0MSU3 RMI1 RecQ-mediated genome instability protein 1 1 QSSFEPEFVIS(1)PR 113.59 0.00014177 147480000.0 131520.0 96741.0 108440.0 99706.0 111770.0 137550.0 127300.0 154310.0 143750.0 132440.0 True False 124224.32342137999 92093.41714879853 115430.21591013474 109182.02826229793 120565.6631156921 136691.49942841835 140168.7263282745 153774.73462622485 117648.62364260682 131266.684636761 0.9463507345000103 0.7015749457193797 0.8793565269782757 0.8317573386150845 0.9184787705221581 1.04132666873296 1.0678164586555003 1.171468107477139 0.8962565327840963 1.0 17.002141282456627 -6.075971087429857 2.3292068050118435 1.0502721933034904 0.8315349474988935 0.5331764910335541 0.08592151924374333 0.21451940773694178 2.3012563070866774 0.02999259870237448 0.031199108614946913 8.395158742975628e-07 6.075971087429857 -0.21873724580459697 QSSFEPEFVIS(ph)PRPK ddPTM_KYSE-520_SHP099_60min_R1 5 QSSFEPEFVISPRPK 15 1 A0A0A0MSU3;Q9H9A7 A0A0A0MSU3 RMI1 RecQ-mediated genome instability protein 1 1 QSSFEPEFVIS(1)PRPK;QSSFEPEFVIS(1)PRPK;QSSFEPEFVIS(1)PRPK;QSSFEPEFVIS(1)PRPK;QSSFEPEFVIS(1)PRPK 153.19 2.2952e-06 5255170000.0 2505620.0 2505520.0 2117800.0 2055120.0 1969610.0 2386890.0 2333950.0 2592610.0 3365090.0 2522020.0 True False 2366628.2637703624 2385151.05833781 2254316.7765998105 2250437.986905643 2124607.1014520745 2371992.5341381114 2569888.44315692 2583616.84102972 2754074.483015649 2499676.8649018663 0.946773679830522 0.9541837554397047 0.9018432775263181 0.9002915610830329 0.849952700400531 0.9489196653549188 1.0280882618233178 1.0335803308445426 1.1017722017136684 1.0 21.253310177997783 -6.720106073784438 3.0697311066737294 1.0472386650449548 0.9109916390424246 0.749983180701095 0.03560698886059407 0.12882664547774345 2.481562587643231 0.016181038202596778 0.011402334620639307 1.904995377608576e-07 6.720106073784438 -0.13624702600253014 QSSIFGGADVGFSGGIPS(ph)PDKGHR ddPTM_KYSE-520_SHP099_60min_R1 2 QSSIFGGADVGFSGGIPSPDKGHR 24 1 E9PR71;Q9P2Y5-2;Q9P2Y5 E9PR71 UVRAG UV radiation resistance-associated gene protein 1 QSSIFGGADVGFSGGIPS(1)PDKGHR;QSSIFGGADVGFS(0.001)GGIPS(0.999)PDKGHR 158.02 1.2964e-11 344520000.0 275860.0 298890.0 286940.0 297660.0 263090.0 261470.0 268320.0 273050.0 369460.0 255680.0 True False 260557.4958867234 284530.8757569636 305436.6115202327 325949.516905258 283793.68622266693 259838.06874262795 295444.40415084566 272102.85328034876 302375.37732867873 253414.87411603017 1.0281854875157126 1.122786800693816 1.2052828887241382 1.2862288294727982 1.1198777783372231 1.0253465572966203 1.1658526563660647 1.0737446025199058 1.1932029577325882 1.0 17.951141679987604 -5.987117700940832 24.99549608443829 1.0977367535268492 1.1663517627657463 0.13460149824303524 0.08123790888675007 494.2114544441225 958911.928113212 0.02587450450185863 0.02932288443089323 1.0301069067093504e-06 5.987117700940832 0.06861500923889707 QSSLAEPVS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 2 QSSLAEPVSPSK 12 0 E7EMD6;O43572 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 1 QSSLAEPVS(0.996)PS(0.004)K;QSSLAEPVS(0.952)PS(0.048)K 266.45 1.1424e-21 3017900000.0 3707300.0 4468000.0 2910800.0 2726530.0 2943830.0 4662900.0 3468200.0 4462500.0 4967600.0 4614700.0 True False 3501648.6786806737 4253350.573395271 3098434.8254446657 2985658.5914388644 3175492.6728985207 4633797.111485069 3818799.5023701657 4447020.629055329 4065609.0630053123 4573817.348182269 0.765585595601517 0.929934505383264 0.6774286311796094 0.6527717143373527 0.6942762316821698 1.013113720714413 0.8349261047531416 0.9722777038358709 0.8888874988899743 1.0 22.124967323326246 -6.25614602813806 24.998868779459432 0.9334261821212988 0.7455624902787914 0.5676391208808668 0.08617086934612038 375.17842677781675 1771854.1604272982 0.030465989089277223 0.02961271276366298 5.544392557294773e-07 6.25614602813806 -0.1878636918425074 QSSLAEPVS(ph)PSKK ddPTM_KYSE-520_SHP099_60min_R1 4 QSSLAEPVSPSKK 13 1 E7EMD6;O43572 E7EMD6 AKAP10 A-kinase anchor protein 10, mitochondrial 1 QSSLAEPVS(0.999)PS(0.001)KK;QSSLAEPVS(0.992)PS(0.008)KK;QSSLAEPVS(0.991)PS(0.009)KK;QSSLAEPVS(0.995)PS(0.005)KK 165.66 5.652600000000001e-07 4175850000.0 5221800.0 5479500.0 4239900.0 3854080.0 3820710.0 5491300.0 4607800.0 6115400.0 6738700.0 5969300.0 True False 4932136.344599774 5216256.5951028215 4513210.738079863 4220370.604428597 4121378.140133816 5457026.759805688 5073601.391794366 6094187.104745087 5515121.948803025 5916416.646045126 0.8336357358971158 0.8816580892066938 0.7628284159292184 0.7133322172720435 0.6966003895092112 0.9223533578307875 0.8575463317286577 1.030046981025042 0.9321726779485098 1.0 22.496292222845927 -6.762080153112313 1.6706111187490502 0.9800339167610794 0.7831954361135938 0.6173957592500826 0.06671891501271592 0.266342038555178 1.5174416360493463 0.0391635735441473 0.023942403859226528 1.7294971348710394e-07 6.762080153112313 -0.19683848064748566 QSSSEQCS(ph)DGEGR ddPTM_KYSE-520_SHP099_60min_R1 2 QSSSEQCSDGEGR 13 0 O60343-2;A0A3B3IRT3;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 1 QSSS(0.001)EQCS(0.999)DGEGR;QSS(0.001)S(0.137)EQCS(0.862)DGEGR 123.59 0.00063629 161565000.0 460440.0 380680.0 376910.0 375010.0 379880.0 359170.0 352880.0 308460.0 409380.0 331260.0 True False 434898.4753356163 362391.56138767063 401206.2216773227 410650.83764913207 409774.39477846556 356928.2868026536 388552.5541769167 307390.0242551056 335046.91162998555 328325.2941163803 1.32459631691203 1.1037576692437683 1.221977803315722 1.2507438354827762 1.2480744009726352 1.087117846839222 1.1834377708322037 0.936236195515738 1.0204724327794943 1.0 18.32476637357272 -6.976056248868861 1.3351599457836625 0.9792954434728217 1.218900103286955 0.6568841173986396 0.07079913979081272 0.2706309152017049 0.9266093890701649 0.04875593154460652 0.023315069838509155 1.056680641391133e-07 6.976056248868861 0.23960465981413337 QSSSS(ph)RDDNMFQIGK ddPTM_KYSE-520_SHP099_60min_R1 1 QSSSSRDDNMFQIGK 15 1 P53999 P53999 SUB1 Activated RNA polymerase II transcriptional coactivator p15 1 QS(0.003)S(0.089)S(0.089)S(0.819)RDDNMFQIGK 233.09 2.4004e-17 0.0 257980.0 220600.0 215160.0 202070.0 208900.0 237860.0 241900.0 233260.0 269040.0 200490.0 True False 243669.3351296201 210002.0448726491 229029.55786817224 221274.67204543905 225339.24152158952 236375.427510313 266353.612716493 232450.87550329347 220189.11794648285 198713.8145788598 1.2262324873891424 1.0568064697349442 1.1525598175122425 1.1135344189048615 1.1339888069642152 1.1895268983249634 1.340388001110966 1.169777128962743 1.1080715168854078 1.0 17.600332646629944 -6.254202209248604 19.648761012749876 1.1833409812539082 1.1317925333345416 0.0 0.08914970327989243 90.7990296033085 246513.8230078274 0.029426382869563266 0.02865332828498549 5.569263814036134e-07 6.254202209248604 -0.051548447919366636 QSSSSAGDS(ph)DGEREDSAAER ddPTM_KYSE-520_SHP099_60min_R1 2 QSSSSAGDSDGEREDSAAER 20 1 I3L3Z2;Q9BRA0 I3L3Z2 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit 1 QS(0.021)S(0.021)S(0.021)S(0.059)AGDS(0.876)DGEREDSAAER;QS(0.005)S(0.005)S(0.005)S(0.003)AGDS(0.982)DGEREDSAAER 105.32 0.00028999 88738000.0 72847.0 64100.0 57242.0 58503.0 59014.0 46127.0 43176.0 35823.0 43693.0 37466.0 True False 68806.03169310573 61020.53978393841 60931.91091043829 64063.1075304317 63658.06605627142 45839.104283058135 47540.651437153036 35698.738374151064 35759.45261089686 37134.080388106915 1.8529079210789483 1.643248981695039 1.640862255739426 1.725183628108627 1.714276087921096 1.2344214210765594 1.280243133538836 0.9613470429601495 0.9629820433724726 1.0 15.180456230488103 -6.585703065362667 1.196527944102348 0.9701799202888072 1.7272663947913434 0.9231580009641484 0.09243655843760584 0.11835754076422325 0.3455373894919516 0.05540658512923896 0.03721306231406943 2.595953653836744e-07 6.585703065362667 0.7570864745025362 QSSTPGSLFLS(ph)PPAPAPK ddPTM_KYSE-520_SHP099_60min_R1 1 QSSTPGSLFLSPPAPAPK 18 0 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;F6UYG0 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 1 QSSTPGSLFLS(1)PPAPAPK 163.18 1.7946000000000001e-06 0.0 104390.0 99670.0 110170.0 162810.0 90245.0 113820.0 88770.0 82062.0 113900.0 100550.0 True False 98599.27860369414 94881.70359227984 117271.73447823238 178283.4134493884 97346.76807618905 113109.60716061473 97743.73791171188 81777.34607541484 93218.63118534203 99659.20522671618 0.989364488502484 0.9520616121353975 1.1767275708395346 1.7889307168746618 0.9767965523579429 1.1349639694928335 0.9807798254998445 0.8205699201531697 0.9353740176161109 1.0 16.60471544825234 -6.6823189208587594 1.8774908546999565 0.9066506133229578 1.1954795819900799 0.20844980716234018 0.2276047934382427 0.5626317285198521 4.058309338979639 0.12168476283932089 0.08163337480154087 2.078170038225671e-07 6.6823189208587594 0.28882896866712204 QSTEKPEETLKR ddPTM_KYSE-520_SHP099_60min_R1 1 QSTEKPEETLKR 12 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 0 54.871 0.040966 518510000.0 864310.0 1340300.0 1236500.0 1197900.0 1172600.0 1247400.0 1321800.0 1265200.0 1613800.0 1226000.0 False True 816365.0013407319 1275909.976168685 1316206.7684699504 1311748.055838232 1264876.9488186496 1239614.5139004632 1455420.443524847 1260811.3164998994 1320774.6005874006 1215138.5938135667 0.6718287160797586 1.0500118938403515 1.0831741952489495 1.0795048914720649 1.0409322485997132 1.0201424925613478 1.1977402832356634 1.0375864308144425 1.0869332990587584 1.0 20.212689440525132 -4.261230733866299 4.811933541604194 1.0717099935536964 0.6496957904926014 0.8424198807445269 0.05120899706678804 0.06219400117971534 4.185490823837852 0.012427181450624047 0.0881684347893653 5.479857513093698e-05 4.261230733866299 -0.42201420306109505 QSTSFLVLQEILESEEKGDPNKPSGFR ddPTM_KYSE-520_SHP099_60min_R1 1 QSTSFLVLQEILESEEKGDPNKPSGFR 27 2 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 0 158.18 3.4397e-08 484510000.0 148830.0 110680.0 85333.0 111430.0 134200.0 94908.0 103250.0 94588.0 80740.0 74394.0 False True 140574.10321475062 105362.76666593313 90833.70171762742 122020.27369734898 144760.77650644974 94315.64396766483 113687.51762289356 94259.89630500526 66079.65128976744 73734.92703765619 1.906479179710314 1.428939729093713 1.2318951868120647 1.6548504026461384 1.9632592357828045 1.2791176143633822 1.5418407827925795 1.2783615593308586 0.8961784319122033 1.0 16.170060541989116 -7.49460062202529 1.899147958927724 0.9336208118835064 1.5704082818113894 0.5501140199214967 0.2252630423338549 0.285816944882562 1.8558235522812283 0.19909062722196258 0.0660984326051741 3.2018381723150284e-08 7.49460062202529 0.6367874699278829 QSVDKVT(ph)SPTKV ddPTM_KYSE-520_SHP099_60min_R1 1 QSVDKVTSPTKV 12 2 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 1 QSVDKVT(0.516)S(0.482)PT(0.002)KV 145.81 0.00052492 5954900000.0 6564200.0 6936800.0 6115300.0 4010200.0 4514400.0 5968100.0 4547000.0 5158700.0 8001700.0 6033100.0 True False 6200070.740591722 6603545.715650927 6509502.022825946 4391328.202289401 4869657.596577617 5930850.874145703 5006655.1344435485 5140805.673749628 6548792.986442068 5979651.42768078 1.0368615655238003 1.1043362302160356 1.0886089434398134 0.7343786264800031 0.8143714822631933 0.9918388966103993 0.8372821049847365 0.8597166132380227 1.0951797217019439 1.0 22.511629957056357 -5.220107138010511 24.966761477190314 0.8958962867019099 1.079375749268977 0.3814165956164849 0.09987544248959442 493.7512043382872 298249.98461720685 0.02718830876640373 0.04709092479949075 6.024109563411196e-06 5.220107138010511 0.18347946256706715 QSVDKVTS(ph)PTKV ddPTM_KYSE-520_SHP099_60min_R1 7 QSVDKVTSPTKV 12 2 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 1 QSVDKVT(0.035)S(0.954)PT(0.01)KV;QSVDKVTS(1)PTKV;QSVDKVT(0.003)S(0.995)PT(0.003)KV;QSVDKVT(0.003)S(0.993)PT(0.004)KV;QSVDKVT(0.221)S(0.758)PT(0.022)KV;QSVDKVT(0.189)S(0.805)PT(0.006)KV;QSVDKVT(0.3)S(0.683)PT(0.018)KV 201.72 3.9939e-07 23177520000.0 23359000.0 26208700.0 21786700.0 14451300.0 17144680.0 22437800.0 15888880.0 18168520.0 29394500.0 21211900.0 True False 22063229.704987966 24949594.711939257 23191105.541952502 15824747.20705821 18493868.776114747 22297757.367320683 17495083.05092531 18105497.644684464 24057199.775044218 21023979.068608478 1.049431681461823 1.1867208690857303 1.1030787971331186 0.7526999125815629 0.8796559735796392 1.060586927648445 0.832148994908758 0.8611832035030094 1.1442743401017141 1.0 24.32553240864358 -5.074608330315317 12.236507778974824 0.9261131036397152 1.1247752510531168 0.35025009699344356 0.11221697745238239 1.0935429489219737 177.7950490206007 0.030179885333217082 0.052307546250258706 8.42154298462907e-06 5.074608330315317 0.1986621474134016 QT(ph)PDSGKPLK ddPTM_KYSE-520_SHP099_60min_R1 1 QTPDSGKPLK 10 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 QT(0.995)PDS(0.005)GKPLK 120.96 0.00087823 0.0 166100.0 170590.0 194460.0 176580.0 160220.0 134970.0 146210.0 153750.0 192860.0 156750.0 True False 156886.10188785897 162394.60033918964 206995.20274700067 193362.11010928729 172828.40247290148 134127.60216542066 160990.33367208982 153216.6771355199 157841.48560496114 155361.31694965452 1.0098144439564616 1.0452704928590062 1.3323471171017323 1.2445962348011448 1.1124287941567028 0.8633268872771287 1.0362317778514931 0.986195792773631 1.0159638750752245 1.0 17.24526780963639 -6.019218793951971 20.51725392074086 0.9835185602781844 1.164420522287723 0.4425481066468744 0.0955423887880826 74.76064092914193 79811.93429419723 0.03356387027367532 0.034244854122493076 9.56711966324295e-07 6.019218793951971 0.18090196200953867 QT(ph)PSRQPPLPHR ddPTM_KYSE-520_SHP099_60min_R1 1 QTPSRQPPLPHR 12 1 Q07666;Q07666-3 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 1 QT(0.918)PS(0.082)RQPPLPHR 84.759 0.010144 790710000.0 349810.0 387430.0 411870.0 258630.0 267120.0 192890.0 222590.0 264280.0 458560.0 276770.0 True False 330405.34197105304 368817.28125571366 438419.7992153 283210.1174400551 288140.8242951029 191686.1019610876 245091.5694690544 263363.2743634154 375297.06335689547 274318.0331238018 1.2044608887303394 1.3444879181138762 1.5982172014824771 1.0324152379447844 1.0503896554444263 0.6987732442459523 0.8934577383705675 0.9600654808011019 1.3681093404002391 1.0 18.065489939653013 -5.392502060426515 6.348973831737553 0.9793082906933823 1.3769637085037931 0.48564963660749194 0.1798371142331924 0.20368293186089434 9.623288932505478 0.053060661882444515 0.07902269642865876 4.050400234975628e-06 5.392502060426515 0.3976554178104108 QTDFEHR ddPTM_KYSE-520_SHP099_60min_R1 3 QTDFEHR 7 0 Q01813-2;Q01813;B1APP6 Q01813-2 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 ;; 114.89 0.0047093000000000005 730180000.0 1546190.0 1447440.0 1109512.0 1092417.0 1611860.0 1530340.0 1170871.0 1261394.0 1328157.0 1251890.0 False True 1460419.7584466524 1377902.8097482645 1181032.9188019685 1196239.983232852 1738704.2117711322 1520788.5804091985 1289234.0672797568 1257018.5186255728 1086997.168913349 1240799.2285556823 1.1769992476112459 1.1104961850695005 0.9518324090003801 0.9640882712550537 1.4012776376360438 1.2256524225755927 1.0390351940986082 1.013071647448371 0.876045974157026 1.0 20.242838263841733 -7.184260416569247 2.5902992465290313 0.9493157992554531 1.1314244296255198 0.2802314875727344 0.1254409090868132 0.4392849228818543 5.695200172142635 0.08305388222564157 0.039658787234164036 6.542437513866599e-08 7.184260416569247 0.18210863037006675 QTDLELS(ph)PLTK ddPTM_KYSE-520_SHP099_60min_R1 8 QTDLELSPLTK 11 0 J3KTC5;Q8WVK7 J3KTC5 SKA2 Spindle and kinetochore-associated protein 2 1 QT(0.037)DLELS(0.848)PLT(0.115)K;QTDLELS(0.999)PLT(0.001)K;QTDLELS(1)PLTK;QTDLELS(1)PLTK;QTDLELS(1)PLTK;QTDLELS(0.997)PLT(0.003)K;QTDLELS(0.999)PLT(0.001)K;QTDLELS(1)PLTK 170.74 1.221e-05 4418230000.0 8370410.0 9170230.0 6647740.0 6243420.0 6662200.0 8528350.0 7114320.0 8553940.0 9497410.0 8730290.0 True False 7906086.67130135 8729678.386004156 7076263.957160079 6836792.759647337 7186477.237267277 8475121.404219186 7833504.894672183 8524268.378644599 7772919.754222817 8652946.422662837 0.9136872326626921 1.0088677266208825 0.8177866372345394 0.7901115326151988 0.830523718307703 0.9794491945566759 0.9052991330393005 0.9851289910126776 0.8982974555192954 1.0 23.044760039132704 -6.266853280910765 24.87254623814448 0.9496845281269638 0.8722053576284332 0.28639537751110555 0.06412494940851358 664.0682252197856 3050852.060473849 0.024276462572404806 0.022000339095400605 5.409370385642425e-07 6.266853280910765 -0.07747917049853059 QTDPST(ph)PQQESSKPLGGIQPSSQTIQPK ddPTM_KYSE-520_SHP099_60min_R1 3 QTDPSTPQQESSKPLGGIQPSSQTIQPK 28 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 QT(0.009)DPS(0.111)T(0.731)PQQES(0.074)S(0.074)KPLGGIQPSSQTIQPK;QTDPS(0.113)T(0.886)PQQESSKPLGGIQPSSQTIQPK;QTDPS(0.003)T(0.997)PQQESSKPLGGIQPSSQTIQPK 279.78 1.3705999999999996e-41 6097090000.0 2655010.0 3645720.0 2501060.0 2035200.0 2204560.0 3265330.0 2392420.0 3086910.0 3587270.0 3112160.0 True False 2507731.302668779 3470574.138862714 2662282.329437489 2228624.796094805 2378046.329769443 3244949.8642573375 2634269.1613691295 3076202.229700211 2935912.1957176607 3084588.6836238443 0.8129872601758494 1.1251335250265542 0.8630915180268962 0.722503070807018 0.7709443863275995 1.0519878651843777 0.8540098637314363 0.9972811759414936 0.9518002226048774 1.0 21.55664669446604 -6.263937655629054 24.996078515601862 0.9635330222996821 0.8663726351398076 0.20176821004192524 0.11047578613966365 474.88312139545405 4751333.581827288 0.040739993622996844 0.03758175307802665 5.445808235617801e-07 6.263937655629054 -0.09716038715987452 QTDTSEEGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 QTDTSEEGSPR 11 0 A0A0J9YWL0;A0A494C1M5 A0A0J9YWL0 1 QT(0.002)DT(0.005)S(0.016)EEGS(0.976)PR 69.878 0.026413 43962000.0 118890.0 98565.0 105880.0 95234.0 98190.0 100680.0 92827.0 100300.0 117580.0 100810.0 True False 112294.93469866095 93829.78945091876 112705.19421398983 104285.01072685375 105916.99437532254 100051.61877465037 102210.85906421638 99952.08271019596 96230.43595059283 99916.90182899314 1.1238832734310826 0.9390782513603912 1.1279892806012313 1.0437174173528379 1.0600508266018747 1.0013482898607864 1.0229586505709447 1.0003521014018533 0.9631046818814533 1.0 16.608441122855968 -6.605542764207227 1.1457433783244428 0.9873561273749576 1.0563852441161414 0.2649836972025683 0.05062446472566716 0.7122202441680577 1.903548550250044 0.030217847810770734 0.019839943983082503 2.48003172134517e-07 6.605542764207227 0.06902911674118384 QTELFAHFIQPAAQKT(ph)PT(ph)SPLK ddPTM_KYSE-520_SHP099_60min_R1 1 QTELFAHFIQPAAQKTPTSPLK 22 1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 2 QTELFAHFIQPAAQKT(0.999)PT(0.873)S(0.128)PLK 117.8 0.0001145 838740000.0 1027600.0 971450.0 989380.0 859400.0 888820.0 942180.0 901320.0 975510.0 1178500.0 952830.0 True False 970596.9795301866 924780.0838238213 1053157.0178639716 941077.1176119694 958765.0773059807 936299.505136074 992434.2216355089 972126.1834957456 964514.107567389 944388.6674905216 1.0277516164073708 0.9792367439998987 1.1151732905292848 0.996493445979872 1.0152229800190857 0.9914344987049215 1.0508747677718926 1.0293708691771255 1.021310548050461 1.0 19.849021204002817 -8.087436804944769 8.081355781324826 1.0000000223591605 1.0254972768482442 0.04346968694952924 0.03599026227763614 11.654705095234618 1077.8690641345036 0.03374118092560515 0.008725764198456025 8.1764200600494e-09 8.087436804944769 0.025497254489083687 QTELKR ddPTM_KYSE-520_SHP099_60min_R1 2 QTELKR 6 1 P11940;P11940-2;E7ERJ7;E7EQV3;A0A087WTT1;H0YAR2;Q9H361;H0YAP2;H0YAW6 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 ; 138.37 0.016963 1780700000.0 2410800.0 2198100.0 1303350.0 1339160.0 2496100.0 2476000.0 1720040.0 1838310.0 1907190.0 2359800.0 False True 2277068.1181893493 2092499.9765846361 1387366.0264337314 1466433.3637668656 2692528.8691337476 2460546.3655744353 1893918.429172706 1831933.3316747798 1560892.372347432 2338894.007896618 0.9735661857704834 0.894653613853342 0.5931718246956382 0.6269772631063509 1.1511974719859819 1.052012770680113 0.8097495751318456 0.7832476912120737 0.6673634491676483 1.0 21.157395053611054 -4.523847953320525 24.99480767492315 0.8320723599183049 0.9538381333460728 0.05580687986107924 0.17548565597687923 92.9093845851046 2396121.4600510867 0.048583521580270086 0.1309462843643968 2.993312413109826e-05 4.523847953320525 0.12176577342776795 QTFLSHGDDFR ddPTM_KYSE-520_SHP099_60min_R1 2 QTFLSHGDDFR 11 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 0 ; 112.43 0.00035642 178100000.0 648280.0 647500.0 429900.0 404500.0 594870.0 657760.0 496010.0 520560.0 551680.0 565430.0 False True 612318.6160858592 616393.1280826848 457612.04186432 442943.5583826403 641682.8846526957 653654.6758563158 546151.5313911029 518754.2988596168 451508.81872106675 560420.7300978836 1.0926052217570736 1.0998756737193234 0.8165508827348215 0.790376826898026 1.145002049693306 1.1663641988085414 0.9745384174059936 0.9256515167970512 0.8056604520004208 1.0 19.096150796829864 -7.245365608676684 3.7093986280015185 0.8957559245055883 1.011889655614535 0.12009252778867885 0.12773465080477417 0.5365141136526017 16.35815258873211 0.07809239674765518 0.03874260350346427 5.6837424631514054e-08 7.245365608676684 0.11613373110894665 QTGIET(ph)PNKSGK ddPTM_KYSE-520_SHP099_60min_R1 1 QTGIETPNKSGK 12 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 QTGIET(0.998)PNKS(0.002)GK 127.32 0.00030505 0.0 299830.0 378760.0 285470.0 179700.0 220870.0 271590.0 175450.0 207580.0 381680.0 262440.0 True False 283197.83220371354 360563.8010696495 303871.85296814947 196778.63397122498 238251.21242160638 269894.90606880485 193186.19822698965 206859.95342953596 312376.5333698096 260114.98577523013 1.08874093262904 1.3861708120931524 1.1682212467017583 0.7565063327080463 0.9159457372728359 1.037598450025581 0.7426953800882706 0.7952634978450924 1.2009170961020277 1.0 17.988789992828874 -5.099760482178384 5.810468932303747 0.9110093504257726 1.2468104192310965 0.4547280188019832 0.14781645881708722 0.1811227338121182 8.618713909806054 0.03942356128306687 0.06984916162860576 7.947664356455467e-06 5.099760482178384 0.3358010688053239 QTGQIIEDDQEKHLS(ph)QEDNDLNK ddPTM_KYSE-520_SHP099_60min_R1 1 QTGQIIEDDQEKHLSQEDNDLNK 23 1 F5H777;A0A2R8Y4L3;A0A2R8YE98;A0A2R8Y7C3;Q8N4S0-2;Q8N4S0 F5H777 CCDC82 Coiled-coil domain-containing protein 82 1 QTGQIIEDDQEKHLS(1)QEDNDLNK 108.72 0.00025792 179490000.0 114450.0 99332.0 93431.0 98124.0 95290.0 85137.0 88678.0 73313.0 115950.0 94120.0 True False 108101.23034958141 94559.94161962824 99453.71175488546 107449.67545794361 102788.78087406559 84605.62840303342 97642.4376538785 73058.6943143829 94896.40286163657 93286.17002425197 1.1588130407913404 1.0136544526915954 1.066114213168255 1.1518285661208891 1.1018651622994404 0.9069471753534116 1.0466978934658162 0.7831674759011924 1.0172612171446849 1.0 16.509375592283924 -6.254576183375381 24.809912399985926 0.9432554147715231 1.0949124264520984 0.46963738624017004 0.07819646053122722 423.62289535701916 1531363.367588202 0.02516419911358686 0.02463079762302983 5.564470144819455e-07 6.254576183375381 0.15165701168057533 QTGYGWICQECDSSS(ph)SKEDENEAERK ddPTM_KYSE-520_SHP099_60min_R1 1 QTGYGWICQECDSSSSKEDENEAERK 26 2 A0A0U1RRH6;O94880-2 A0A0U1RRH6 PHF14 PHD finger protein 14 1 QTGYGWICQECDS(0.257)S(0.257)S(0.385)S(0.102)KEDENEAERK 101.85 0.0015197000000000001 344200000.0 60269.0 59571.0 64416.0 44667.0 50623.0 61730.0 43287.0 60331.0 69463.0 32959.0 True False 56925.75842672711 56709.11974210601 68568.3584292441 48912.138250376745 54606.742094530586 61344.720172419155 47662.8724004086 60121.725842361295 56850.27021973142 32667.008901713987 1.7426070013940058 1.735975274403852 2.099009390040801 1.4972946680713826 1.67161744923838 1.8778799233498384 1.4590522365795116 1.8404417136338063 1.7402961621242456 1.0 14.995546742491422 -11.270630828101039 0.4670704670896974 7.475606198945985e-19 1.7530129155756586 0.6211161739187532 0.17344340528874289 58.54173676969832 3.550754282552981 61.04795023654042 0.0892342847711062 5.362523049414216e-12 11.270630828101039 1.7530129155756586 QTLPS(ph)SPTTTK ddPTM_KYSE-520_SHP099_60min_R1 1 QTLPSSPTTTK 11 0 F8VW64;F8VWX1;F8W659;J3KQU3;P51513-2;P51513 F8VW64 NOVA1 RNA-binding protein Nova-1 1 QTLPS(0.442)S(0.442)PT(0.089)T(0.019)T(0.008)K 64.12100000000001 0.032587 460720000.0 733130.0 835490.0 620000.0 552300.0 618850.0 816760.0 673430.0 864190.0 982720.0 886490.0 True False 692461.8174415783 795351.8063039425 659966.192035074 604790.4259449507 667549.9742251595 811662.2978782604 741506.8764434402 861192.3265934619 804282.8203552187 878636.3882787835 0.7881096511357623 0.9052115492985756 0.7511254949592101 0.688328453058623 0.7597568039867612 0.9237749639168451 0.8439291683514554 0.9801464383696947 0.915376179594359 1.0 19.744906723585515 -6.699522502979101 1.3584756222103895 0.9567369535695924 0.7822018240212888 0.5779509112613491 0.06490591894920975 0.3492845520881765 1.3100219617547686 0.041354609895548476 0.025522542505447842 1.997457267464574e-07 6.699522502979101 -0.17453512954830364 QTLPSS(ph)PTTTK ddPTM_KYSE-520_SHP099_60min_R1 4 QTLPSSPTTTK 11 0 F8VW64;F8VWX1;F8W659;J3KQU3;P51513-2;P51513 F8VW64 NOVA1 RNA-binding protein Nova-1 1 QTLPS(0.084)S(0.533)PT(0.133)T(0.216)T(0.033)K;QTLPS(0.117)S(0.581)PT(0.262)T(0.024)T(0.016)K;QTLPS(0.068)S(0.529)PT(0.295)T(0.068)T(0.039)K;QTLPS(0.358)S(0.577)PT(0.052)T(0.01)T(0.002)K 150.26 5.5943e-05 2800120000.0 6826800.0 7662900.0 5780880.0 4980040.0 4936120.0 7448510.0 5595170.0 7404620.0 8632300.0 7658760.0 True False 6448103.795111595 7294762.781752599 6153524.77453504 5453341.504296382 5324564.561319047 7402021.08620551 6160784.387196949 7378935.1014712965 7064891.922574432 7590909.344825121 0.8494507709418767 0.9609866816187957 0.810643955158024 0.7184042459964348 0.7014396193453307 0.9751165176609072 0.8116003112850877 0.9720752503126214 0.9307042939974924 1.0 22.8558412914191 -7.2648270461053945 24.637975798012757 0.9635423411979765 0.8326737419405267 0.35108311700214145 0.08409830471665826 316.1188283564014 2299052.3212017813 0.04708890471626606 0.024073123767895614 5.434667191643851e-08 7.2648270461053945 -0.13086859925744987 QTLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 QTLSPK 6 0 O15021;O15021-2;O15021-3;O15021-6;H7C1I9 O15021 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 QT(0.001)LS(0.999)PK;QT(0.001)LS(0.999)PK;QT(0.001)LS(0.999)PK 87.485 0.016288999999999998 2333300000.0 7238200.0 6489400.0 5914500.0 5797900.0 6116100.0 6196800.0 5809400.0 6140100.0 7877700.0 7162200.0 True False 6836682.617006031 6177639.483212008 6295758.133534591 6348930.672797801 6597402.274151247 6158123.472613756 6396670.846280274 6118801.426210114 6447308.260656442 7098748.480107276 0.9630828076476257 0.8702434662283811 0.8868828288785138 0.8943732392532742 0.9293754092906736 0.8674942477354395 0.901098392794952 0.8619549549271602 0.9082316803762865 1.0 22.759133267083037 -8.036077211446573 23.403606677819486 1.000000000568777 0.8950990703524614 0.5297957332339256 0.02894657310905065 1955.5308521379218 1268568.682755157 0.02649937799489712 0.006842110010884186 9.20285943319672e-09 8.036077211446573 -0.10490093021631564 QTPMAS(ph)SPRPK ddPTM_KYSE-520_SHP099_60min_R1 3 QTPMASSPRPK 11 1 Q5SWC8;Q5SSJ5-2;Q5SSJ5;B0QZK4 Q5SWC8 HP1BP3 Heterochromatin protein 1-binding protein 3 1 QT(0.002)PMAS(0.651)S(0.347)PRPK;QT(0.013)PMAS(0.608)S(0.379)PRPK;QTPMAS(0.587)S(0.413)PRPK 101.32 0.00083242 3200140000.0 1895930.0 1598040.0 1693550.0 1135920.0 1159850.0 1447060.0 1437780.0 1531110.0 1923800.0 1600790.0 True False 1790758.983457247 1521267.759693059 1802718.9427758062 1243877.495273198 1251123.5963562285 1438028.3617803487 1583124.8337805714 1525798.9367737588 1574486.4150514577 1586608.2459957753 1.1286711688135367 0.958817504908587 1.1362092358497715 0.7839852707260605 0.7885523093137635 0.9063537677997028 0.9978044912951919 0.9616733939360993 0.9923599092750777 1.0 20.597514521486744 -5.247323908794421 24.999686369178292 0.9144404699590263 1.0629911209083203 0.39914130653393953 0.08719580650054518 913.0800352432469 1617139.0343223761 0.025303273471100295 0.04355830428588857 5.6581712961870574e-06 5.247323908794421 0.14855065094929398 QTPMASS(ph)PRPK ddPTM_KYSE-520_SHP099_60min_R1 3 QTPMASSPRPK 11 1 Q5SWC8;Q5SSJ5-2;Q5SSJ5;B0QZK4 Q5SWC8 HP1BP3 Heterochromatin protein 1-binding protein 3 1 QTPMAS(0.197)S(0.803)PRPK;QTPMAS(0.175)S(0.825)PRPK;QT(0.001)PMAS(0.178)S(0.821)PRPK 97.45 0.0014582 3698130000.0 2056730.0 1761280.0 1713040.0 1259980.0 1249690.0 1585320.0 1531630.0 1779440.0 2098210.0 1806060.0 True False 1942639.0869103945 1676665.4650648234 1823465.2993609111 1379728.1203732 1348033.4932365515 1575425.4298354036 1686462.1076683027 1773267.537964418 1717227.9555697665 1790059.713493418 1.0852370299531562 0.9366533710725782 1.0186617159280682 0.7707721200431749 0.7530662150961303 0.8800965788794042 0.9421261731973523 0.9906192092909409 0.9593132243719873 1.0 20.77157628358685 -9.618381455504032 17.180209625130033 0.9999999997315161 0.9206362445903244 0.04576354856350451 0.0979779241286384 0.0 0.0 0.10324329694989083 0.025040177556553512 2.407789656709856e-10 9.618381455504032 -0.07936375514119165 QTPTHPLT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 QTPTHPLTPR 10 0 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 QT(0.002)PT(0.007)HPLT(0.991)PR;QTPTHPLT(1)PR 89.507 0.0049811000000000005 1182130000.0 911740.0 1132410.0 921080.0 923190.0 853990.0 903580.0 870290.0 910910.0 1171500.0 1212020.0 True False 861163.9646913697 1078007.323817937 980454.2905801077 1010929.7000328064 921194.1544615735 897940.4220540181 958267.4064118934 907750.2658179915 958785.1311117477 1201282.4457372923 0.7168705142967661 0.8973804017891107 0.8161729941690354 0.84154205667456 0.766842267387156 0.747484844418003 0.7977036622921371 0.7556509870256664 0.7981346389551952 1.0 20.19614396695974 -9.811183461365998 5.963284009202088 1.0000000166771346 0.7951801269050536 0.6177026753743144 0.04880875448791746 1.0896964520557187e-08 2.255890897903359e-09 0.047514902327349534 0.011524055675895553 1.5446018072083295e-10 9.811183461365998 -0.204819889772081 QTQS(ph)ASSTLQK ddPTM_KYSE-520_SHP099_60min_R1 3 QTQSASSTLQK 11 0 O95819-3;E7EX83;G5E948;C9J840;H7C360;E7ENQ1;H7C0P6;G3XAA2;A0A0D9SG62;A0A0D9SEY1;O95819-4;O95819-2;O95819;O95819-5 O95819-3 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 QTQS(0.972)AS(0.013)S(0.013)T(0.001)LQK;QTQS(0.99)AS(0.004)S(0.004)T(0.001)LQK;QTQS(0.999)AS(0.001)STLQK 247.14 1.8331e-14 1680390000.0 3092740.0 2979080.0 2436700.0 2092830.0 2127720.0 2910890.0 2290840.0 2643720.0 3184870.0 2640990.0 True False 2921179.5469756625 2835960.5251097553 2593773.5808578464 2291731.9339677175 2295159.458929233 2892722.055770176 2522420.4636438647 2634549.5523688886 2606577.8920391607 2617592.883259128 1.1159793280529335 1.0834230728724863 0.990900302887581 0.8755112181976574 0.8768206368560882 1.1051077019160018 0.9636412445098165 1.0064779627184226 0.995791938734853 1.0 21.319809300306357 -4.7399441169588545 3.798877105196147 0.9730106288464915 1.1070511585686729 0.389028946369229 0.06232356704089385 0.22567165367736744 6.922260737658605 0.01748807013786427 0.0481921086051511 1.8199350245158444e-05 4.7399441169588545 0.1340405297221814 QTSIQSPSSYGNS(ph)SPPLNK ddPTM_KYSE-520_SHP099_60min_R1 1 QTSIQSPSSYGNSSPPLNK 19 0 Q9H3D4-10;Q9H3D4-12;Q9H3D4-2;Q9H3D4-9;Q9H3D4-11;Q9H3D4;Q9H3D4-8;Q9H3D4-4;Q9H3D4-7;Q9H3D4-3 Q9H3D4-10 TP63 Tumor protein 63 1 QTSIQSPSSYGNS(0.5)S(0.5)PPLNK 218.64 3.299e-16 250450000.0 521180.0 613580.0 411750.0 370470.0 344190.0 572810.0 412060.0 516670.0 651960.0 500210.0 True False 492269.10645342775 584102.6957976428 438292.06382329395 405679.35741413257 371275.7948267875 569234.8803169196 453715.04611805844 514877.792361685 533580.4985741496 495778.5285574913 0.9929213915046412 1.178152465571952 0.884048095222157 0.8182672988975345 0.748874292533493 1.1481636406747096 0.9151567080530493 1.03852378169697 1.0762476949670374 1.0 18.919336266203526 -6.287670709788381 24.9933970633633 1.030497220391082 0.930403177165924 0.17599880862228157 0.11966648971591859 1720.6307583883704 1639423.5010225556 0.04615639494543301 0.04071969130064182 5.156194487304111e-07 6.287670709788381 -0.10009404322515802 QTSIQSPSSYGNSS(ph)PPLNK ddPTM_KYSE-520_SHP099_60min_R1 6 QTSIQSPSSYGNSSPPLNK 19 0 Q9H3D4-10;Q9H3D4-12;Q9H3D4-2;Q9H3D4-9;Q9H3D4-11;Q9H3D4;Q9H3D4-8;Q9H3D4-4;Q9H3D4-7;Q9H3D4-3 Q9H3D4-10 TP63 Tumor protein 63 1 QTSIQSPSSYGNS(0.079)S(0.921)PPLNK;QTSIQSPSSYGNS(0.027)S(0.973)PPLNK;QTSIQSPSSYGNS(0.048)S(0.952)PPLNK;QTSIQSPSSYGNS(0.026)S(0.974)PPLNK;QTSIQSPSSYGNS(0.214)S(0.786)PPLNK;QTSIQSPSSYGNS(0.004)S(0.996)PPLNK 398.1 1.2120999999999996e-92 9041410000.0 9266680.0 10824710.0 7228810.0 6599700.0 6450250.0 10062000.0 7140700.0 9679000.0 10978240.0 9372040.0 True False 8752638.787731402 10304674.683379045 7694790.659104943 7226933.503727843 6957847.978097825 9999199.325690601 7862551.642516189 9645425.80809559 8984868.354909293 9289011.016936779 0.9422573373820525 1.1093403446922814 0.8283756629284784 0.7780089280280622 0.7490407714461192 1.076454673964637 0.8464358184289257 1.0383695089293095 0.9672577994069618 1.0 23.147093573153576 -7.269695621777879 24.64986808929523 1.0021102399968387 0.9050369609485609 0.1381025181053065 0.11172516685374421 1202.1196194073925 3589026.570487036 0.06359941860656614 0.031407783076833895 5.374083106592817e-08 7.269695621777879 -0.09707327904827778 QTVPSENIPLPECS(ph)SPPSCKR ddPTM_KYSE-520_SHP099_60min_R1 2 QTVPSENIPLPECSSPPSCKR 21 1 A0A494C142;Q99728-3;Q99728-2;Q99728 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 QTVPSENIPLPECS(0.544)S(0.438)PPS(0.019)CKR;QTVPSENIPLPECS(0.561)S(0.434)PPS(0.005)CKR 74.748 0.0075693 1086010000.0 275580.0 277880.0 240783.0 185785.0 216080.0 258870.0 172317.0 235340.0 360070.0 244940.0 True False 260293.02804489 264530.22769361635 256304.25744642163 203441.95054170318 233084.26667297824 257254.29630704943 189736.48401185594 234523.66046876909 294690.36462604115 242770.02216043617 1.0721794467394068 1.0896330005638002 1.0557492031575515 0.8380027679334198 0.9601031651220222 1.0596625317150616 0.7815482419261276 0.9660322076907114 1.2138663662158957 1.0 17.889230759495792 -5.024482653019875 24.05112788506868 0.966105526606913 1.0788524998051585 0.14251561641210297 0.11043354238489227 805.7694739075127 791569.011657322 0.03030379041150614 0.05287831087890096 9.451861451603871e-06 5.024482653019875 0.11274697319824556 QTWPHWK ddPTM_KYSE-520_SHP099_60min_R1 2 QTWPHWK 7 0 E9PDF6;O43795-2;O43795 E9PDF6 MYO1B Unconventional myosin-Ib 0 ; 106.04 0.006487000000000001 1634170000.0 3749200.0 3094600.0 2417500.0 2404500.0 4550800.0 3139200.0 2848900.0 2747800.0 2825800.0 2576300.0 False True 3541224.4021550957 2945930.7709107 2573335.9181367643 2633022.9570607124 4908922.069489954 3119607.088372887 3136894.6145846113 2738268.523141341 2312705.952621065 2553475.9863310694 1.3868250263998998 1.1536943314448491 1.0077776066475685 1.031152425617262 1.92244692950619 1.2217099769382427 1.2284801703155313 1.0723690129844488 0.9057089101292267 1.0 21.284031060893014 -7.347694916958261 2.2878027131861947 0.9554486023074864 1.2819844482550433 0.23781800502950345 0.24196142582951588 0.5234414056581085 5.14242011817568 0.18794672040328309 0.07310315793466168 4.490607351927369e-08 7.347694916958261 0.3265358459475569 QVAEQGGDLS(ph)PAANR ddPTM_KYSE-520_SHP099_60min_R1 6 QVAEQGGDLSPAANR 15 0 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR;QVAEQGGDLS(1)PAANR 258.13 1.2015000000000002e-26 6395880000.0 5286830.0 5943330.0 5149990.0 3981160.0 4638910.0 4797270.0 4351970.0 5544090.0 6343620.0 5385830.0 True False 4993559.000865684 5657803.505679794 5481966.595675343 4359528.249420604 5003965.825212633 4767328.458473051 4791909.598734173 5524858.845790333 5191778.517646696 5338115.736312332 0.9354534909944321 1.0598877553727053 1.026947871958727 0.8166792300446161 0.9374030224135727 0.8930732666666401 0.8976781013078057 1.03498296378396 0.9725863533324723 1.0 22.347899154383253 -10.039243736471342 10.855513967620533 0.9999982829894208 0.9526684817403771 0.03880408424103987 0.07055763200865153 0.0 0.0 0.07280058965644547 0.0176567365153396 9.136003631451943e-11 10.039243736471342 -0.047329801249043735 QVEEALHQLHAR ddPTM_KYSE-520_SHP099_60min_R1 1 QVEEALHQLHAR 12 0 F5H169;F5H5V4;F5GX23;J3KN29;O00233-2;O00233 F5H169 PSMD9 26S proteasome non-ATPase regulatory subunit 9 0 145.6 2.9571999999999997e-05 511450000.0 360980.0 278660.0 233840.0 206800.0 388180.0 293530.0 231340.0 216850.0 226670.0 234900.0 False True 340955.7198042108 265272.75532281236 248913.7005572287 226454.20982331282 418727.5575579264 291697.9703905752 254726.10486082506 216097.7979631705 185512.44188570225 232818.96874943445 1.464467099204257 1.1393949416909646 1.0691298131515898 0.9726621977568695 1.7985113489982485 1.2528960675214904 1.0940951513919281 0.9281795170037899 0.7968098256004017 1.0 17.828849079959184 -7.04124126182523 2.618196672332358 0.8952586726364299 1.2742894241577893 0.36919947041592627 0.22005922785681636 0.3412834987983905 4.618171376817836 0.12593672819590288 0.06826865247415183 9.094079326363904e-08 7.04124126182523 0.37903075152135945 QVEELY(ph)HSLLELGEK ddPTM_KYSE-520_SHP099_60min_R1 1 QVEELYHSLLELGEK 15 0 A0A0D9SGF6;Q13813;Q13813-2 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 QVEELY(1)HSLLELGEK 102.29 0.00090369 13195000.0 54031.0 55488.0 45243.0 45957.0 49025.0 45215.0 42340.0 50340.0 58828.0 45865.0 True False 51033.79272187181 52822.273190813954 48159.436171359455 50324.73946252414 52882.98858590682 44932.79641334736 46620.14039857929 50165.38228944432 48146.31813319842 45458.67178243006 1.1226415273663266 1.1619845261565682 1.059411423234175 1.1070437716126769 1.1633201436023102 0.988431792033001 1.0255499901472738 1.1035382320350464 1.0591228525908483 1.0 15.472267911463785 -6.257006386091176 24.99976200582355 1.0411885514780557 1.120646882507322 0.5362543154082949 0.0404994765437045 354.5985575284498 1999755.7443962102 0.014232333978934973 0.013791466762308932 5.533419725287276e-07 6.257006386091176 0.07945833102926625 QVEELYHSLLELGEK ddPTM_KYSE-520_SHP099_60min_R1 2 QVEELYHSLLELGEK 15 0 A0A0D9SGF6;Q13813;Q13813-2 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 184.99 1.0256999999999999e-10 194180000.0 360050.0 225659.0 165022.0 225659.0 297920.0 262520.0 196817.0 229937.0 207818.0 155030.0 False True 340077.30875811924 214818.0029189357 175659.58216453547 247105.56351314794 321364.6090670749 260881.51530315046 216713.1831088138 229139.4022146991 170083.48986545563 153656.55481151497 2.2132300777879603 1.398039954640694 1.1431961518336191 1.6081680590604386 2.091447445644486 1.6978222349392418 1.4103738260606464 1.4912439140378766 1.1069068291560422 1.0 17.229349786387928 -7.654759760671973 1.3203080641971299 0.990738635389223 1.654504966854594 0.3954929502175547 0.2967877483093051 0.4873230108033392 1.6117909430573738 0.2928542707361561 0.09473288762923401 2.2143192691802583e-08 7.654759760671973 0.6637663314653709 QVETEEAGVVTTATASVNLKVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 QVETEEAGVVTTATASVNLKVSPK 24 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 1 QVETEEAGVVTTAT(0.003)AS(0.011)VNLKVS(0.986)PK 112.95 0.00019088 117980000.0 114750.0 154350.0 120870.0 101680.0 103120.0 108990.0 97224.0 109400.0 154880.0 117980.0 True False 108384.58875154615 146934.79431592659 128661.47359883782 111343.6366287932 111234.9573274596 108309.75298221238 107052.35073480089 109020.51693415192 126757.69620707452 116934.78898705111 0.9268806117531732 1.2565532942655546 1.1002839677855432 0.9521857232848211 0.9512563223573894 0.9262406330951362 0.9154876120455088 0.932318926459297 1.0840032919639608 1.0 16.835344680888227 -5.245562533789714 6.97893291388697 0.958630701908512 1.111447402270768 0.3053422387759561 0.08737470901547756 0.16882237423174512 43.1508367824477 0.02313125549446307 0.03861949379259972 5.681165829202594e-06 5.245562533789714 0.15281670036225614 QVGSRPT(ph)SWALFELPGPSQAVK ddPTM_KYSE-520_SHP099_60min_R1 1 QVGSRPTSWALFELPGPSQAVK 22 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 QVGS(0.235)RPT(0.382)S(0.382)WALFELPGPSQAVK 95.255 0.0056607 148280000.0 355670.0 343600.0 300300.0 308980.0 356760.0 360660.0 347320.0 363260.0 409920.0 362060.0 True False 335940.2760894333 327092.9402458857 319657.81849698845 338345.3663017753 384834.982313271 358408.98715996544 382430.4951165459 361999.93584552157 335488.8612422778 358852.43007841724 0.9361515986279454 0.911497074645443 0.8907779123221657 0.9428537692439183 1.072404559805199 0.9987642750019697 1.0657040695892077 1.0087710309399787 0.9348936585686936 1.0 18.45303116482812 -5.579804123849563 6.926264155882562 1.015515057535878 0.9132701643081264 0.6071924221767597 0.03724155366882711 0.13789586639130796 13.384182080210591 0.011131922171336092 0.01444575977697112 2.6314545668864973e-06 5.579804123849563 -0.10224489322775165 QVHPDTGISS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 QVHPDTGISSK 11 0 P62807;O60814;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;P57053;Q5QNW6-2;Q16778;P06899;P33778;P23527;Q99880;Q96A08 P62807;Q16778;Q99880 HIST1H2BC;HIST1H2BK;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;H2BFS;HIST2H2BE;HIST1H2BJ;HIST1H2BB;HIST1H2BO;HIST1H2BL;HIST1H2BA Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-J;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-L;Histone H2B type 1-A 1 QVHPDTGIS(0.042)S(0.958)K;QVHPDTGIS(0.012)S(0.988)K 190.86 5.214e-07 997480000.0 1222620.0 1221680.0 1236720.0 1276460.0 1361880.0 1236650.0 1163590.0 1341830.0 1614290.0 1351520.0 True False 1154798.8313674545 1162988.6590209352 1316440.950021965 1397774.374618306 1469052.2079627689 1228931.6086379727 1281217.0327440463 1337175.5049154751 1321175.628939297 1339546.5842666489 0.8620818752635342 0.8681957556986549 0.9827511528780961 1.0434682832501379 1.0966787010001742 0.9174235693421341 0.9564557498726065 0.9982299388621324 0.9862856913353191 1.0 20.353313322749234 -4.7808680565946 4.6224951183962695 0.9994238645460681 0.8624353968489138 0.5841504509290717 0.04491633481722794 0.13383997172084705 6.941822548298718 0.012878580554602621 0.03126996197908316 1.6562730808851892e-05 4.7808680565946 -0.13698846769715434 QVHPDTGISSK ddPTM_KYSE-520_SHP099_60min_R1 6 QVHPDTGISSK 11 0 P62807;O60814;U3KQK0;Q99879;Q99877;Q93079;Q5QNW6;P58876;P57053;Q5QNW6-2;Q16778;P06899;P33778;P23527;Q99880;Q96A08 P62807;Q16778;Q99880 HIST1H2BC;HIST1H2BK;HIST1H2BN;HIST1H2BM;HIST1H2BH;HIST2H2BF;HIST1H2BD;H2BFS;HIST2H2BE;HIST1H2BJ;HIST1H2BB;HIST1H2BO;HIST1H2BL;HIST1H2BA Histone H2B type 1-C/E/F/G/I;Histone H2B type 1-K;Histone H2B;Histone H2B type 1-M;Histone H2B type 1-N;Histone H2B type 1-H;Histone H2B type 2-F;Histone H2B type 1-D;Histone H2B type F-S;Histone H2B type 2-E;Histone H2B type 1-J;Histone H2B type 1-B;Histone H2B type 1-O;Histone H2B type 1-L;Histone H2B type 1-A 0 ;;;;; 190.78 1.34e-06 11680200000.0 12600700.0 17000400.0 12136660.0 22343300.0 13947100.0 13754800.0 11902900.0 12697300.0 13534900.0 11061110.0 False True 11901714.052127292 16183675.26587935 12919008.522942597 24466800.514241904 15044657.421856223 13668951.191115996 13106161.293109326 12653256.029872084 11077303.347063081 10963117.170813365 1.0856140517965742 1.4761928577179173 1.1784064989596497 2.2317375736326905 1.3722974212032475 1.246812469313587 1.1954776263817826 1.1541659030661737 1.01041548443482 1.0 23.386154725965607 -6.461524591183965 2.231648387599519 1.0995209995735233 1.4942385174124835 0.27621485264410794 0.2914746098663693 0.4473982109575041 4.422228133937142 0.12678929856280052 0.1023124820544617 3.455217644436137e-07 6.461524591183965 0.39471751783896014 QVLDYPS(ph)PDVECAK ddPTM_KYSE-520_SHP099_60min_R1 2 QVLDYPSPDVECAK 14 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 QVLDYPS(1)PDVECAK;QVLDYPS(1)PDVECAK 145.55 4.2389999999999996e-06 562530000.0 937740.0 987420.0 810300.0 583900.0 799160.0 939730.0 796770.0 912020.0 1066360.0 921420.0 True False 885721.692861655 939982.8610523633 862533.2345258391 639393.6804440629 862049.3454015966 933864.7964948546 877315.287325838 908856.4154870682 872735.9047480364 913256.9356539123 0.9698494019401656 1.0292644099979538 0.9444584550658202 0.7001246368703927 0.9439286051349286 1.0225652388023603 0.9606445383277169 0.9951815091733268 0.9556301963621422 1.0 19.80066127949332 -6.002834262500243 24.99885148628468 0.9846880296605599 0.9093042003116876 0.16232126553743886 0.0813939705438663 242.041827023611 2134896.2818473354 0.027820458811657872 0.030977423138081845 9.934951183579182e-07 6.002834262500243 -0.07538382934887233 QVLEGEEIAYKFT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 QVLEGEEIAYKFTPK 15 1 Q03252 Q03252 LMNB2 Lamin-B2 1 QVLEGEEIAYKFT(1)PK;QVLEGEEIAYKFT(1)PK 163.91 1.2837e-07 1920970000.0 2821000.0 2838200.0 2166900.0 1997610.0 1950330.0 2829300.0 2111000.0 2744400.0 3500100.0 2881300.0 True False 2664513.5064759194 2701848.6117749456 2306581.8411625875 2187462.2537966515 2103809.875140269 2811641.2892244533 2324400.4813746074 2734880.3169477745 2864570.0703407875 2855773.923617482 0.9330267653332697 0.9461003160755963 0.8076906305807222 0.7659787897445807 0.7366864224585813 0.984546173621081 0.8139301441726975 0.9576669547719069 1.0030801271244059 1.0 21.445450342743804 -7.423547995251329 4.062974709943008 0.9971360197096939 0.8542154607342496 0.3944561646971222 0.07569208854582062 0.2585819285994879 7.419222878799324 0.05014739922327622 0.021668729968924664 3.770960686340569e-08 7.423547995251329 -0.1429205589754443 QVLEPSFR ddPTM_KYSE-520_SHP099_60min_R1 2 QVLEPSFR 8 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 101.9 0.018085 558730000.0 964960.0 1141310.0 669840.0 507340.0 726850.0 790020.0 485690.0 657970.0 577160.0 688340.0 False True 911431.7451999306 1086479.7544587639 713018.9581818935 555557.4410626667 784048.9597892184 785089.1921369612 534788.2850776085 655687.6556413528 472362.2930195964 682241.8431204173 1.3359364489156094 1.5925140995302418 1.0451117376804517 0.8143115915049636 1.1492243809074487 1.150749107598185 0.7838690787882635 0.9610780432967703 0.692367813236315 1.0 19.379923715185665 -4.862325984996594 5.317965142693886 0.9452599412041045 1.4605778086838652 0.6522950936694907 0.15157033546986945 0.11711206777559306 5.058113256479721 0.04050686130929528 0.08816269094581154 1.3730109948270805e-05 4.862325984996594 0.5153178674797607 QVLQSTQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 QVLQSTQSPR 10 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 QVLQS(0.001)TQS(0.999)PR;QVLQSTQS(1)PR;QVLQSTQS(1)PR;QVLQSTQS(1)PR;QVLQSTQS(1)PR;QVLQSTQS(1)PR;QVLQSTQS(1)PR;QVLQS(0.005)T(0.005)QS(0.99)PR;QVLQSTQS(1)PR 199.4 1.5478e-06 56358050000.0 15795620.0 13966040.0 14331450.0 12856680.0 15437910.0 19854820.0 22110770.0 25139290.0 28746900.0 23306420.0 True False 14919405.47081217 13295090.474946577 15255278.198130762 14078575.001698222 16652785.687307658 19730898.70360846 24345942.411920056 25052087.670544412 23527187.610376704 23099943.250920366 0.645863295366223 0.5755464561332575 0.6604032759917257 0.6094636185366945 0.7209015843207391 0.8541535574041865 1.0539394901305674 1.0845086240437525 1.0184954722535655 1.0 24.461385971622725 -6.4003394058616925 1.6925120024064502 1.0515251188508383 0.6224606835795446 0.9639743250887647 0.036376308294120904 0.05870513773001593 0.33477236410853767 0.015926975685278677 0.013085662674768728 3.977961670114106e-07 6.4003394058616925 -0.4290644352712937 QVQEFLKDGDDVIIIGVFK ddPTM_KYSE-520_SHP099_60min_R1 2 QVQEFLKDGDDVIIIGVFK 19 1 A0A499FI48;P13667 A0A499FI48 PDIA4 Protein disulfide-isomerase A4 0 ; 147.17 1.4850999999999999e-05 20759000.0 381916.0 324065.0 262245.0 325777.0 281488.0 212277.0 233018.0 271414.0 259262.0 141553.0 False True 360730.35814932897 308496.4309685182 279149.73230683553 356738.7481315734 303639.504152366 210952.10050284475 256573.73347652674 270472.5281825036 212186.55626316206 140298.9505465677 2.5711550709682336 2.198850595579635 1.9896779784833871 2.5427043234593936 2.164232183986171 1.5035900103388586 1.8287644524565805 1.927830016752185 1.5123887629703514 1.0 17.098144691898366 -7.367779095453763 0.10701908042103925 8.004554224150297e-10 3.4852870189327647 0.7588981750642212 0.2275819175135393 4.518088820398549 0.49263629675013026 7.236014935682395 7.478225054193652 4.2876655769945193e-08 7.367779095453763 3.4852870181323095 up QVSS(ph)PSFTNR ddPTM_KYSE-520_SHP099_60min_R1 1 QVSSPSFTNR 10 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 QVS(0.028)S(0.969)PS(0.003)FTNR 150.51 0.00015343 629950000.0 1087400.0 1089800.0 1055600.0 950650.0 997600.0 1054800.0 897230.0 1031700.0 1246200.0 1013000.0 True False 1027079.7543218421 1037444.3721768513 1123645.6650197166 1040999.4901766548 1076105.444432447 1048216.6019418059 987930.764520956 1028121.2735005893 1019921.4941455069 1004025.6081020749 1.0229617113684448 1.0332847726244236 1.1191404441802648 1.0368256364939457 1.0717908345650922 1.0440138114836193 0.9839696881720544 1.023999054609835 1.0158321520040512 1.0 19.93736463563549 -6.590999711495198 6.309563437831438 1.0082172244364473 1.0578736824518074 0.44672646024517626 0.026801207182551738 0.20379342040744 14.492224414423038 0.010451297667074108 0.008068903016751417 2.564485740122612e-07 6.590999711495198 0.049656458015360005 QVSSTKPVPLNCPS(ph)PVPPLYLDDDGLPFPTDVIQHR ddPTM_KYSE-520_SHP099_60min_R1 1 QVSSTKPVPLNCPSPVPPLYLDDDGLPFPTDVIQHR 36 1 J3QR65;Q9NYA4 J3QR65 MTMR4 Myotubularin-related protein 4 1 QVSSTKPVPLNCPS(1)PVPPLYLDDDGLPFPTDVIQHR 106.97 0.00022429 271860000.0 73573.0 79594.0 54970.0 56201.0 52616.0 94987.0 60791.0 63780.0 88640.0 49895.0 True False 69491.75902586064 75770.18476697036 58513.454155109735 61542.32614255319 56756.57985591178 94394.15089936128 66936.34754298608 63558.76206636391 72545.21043256117 49452.969117722634 1.405209035284327 1.532166543662923 1.183214177005604 1.244461702512783 1.1476880128431304 1.908766098040672 1.3535354648503375 1.2852365227063007 1.4669535869498054 1.0 15.593769521420018 -10.171857183262961 4.448036185850139 0.9999293797343863 1.3893165280399393 0.24299097550273208 0.20747829729490047 23162771.856786788 52969107.78506962 10988.790750316955 0.05126752949637352 6.731979994950895e-11 10.171857183262961 0.389387148305553 QVVPPFKPNISGEFGLDNFDSQFTNEPVQLT(ph)PDDDDIVR ddPTM_KYSE-520_SHP099_60min_R1 2 QVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVR 39 1 P41743 P41743 PRKCI Protein kinase C iota type 1 QVVPPFKPNISGEFGLDNFDSQFTNEPVQLT(1)PDDDDIVR;QVVPPFKPNISGEFGLDNFDSQFTNEPVQLT(1)PDDDDIVR 161.14 5.8164e-10 445813000.0 91860.6 127048.0 101249.4 85949.2 92508.7 113552.7 100540.1 114245.0 138432.0 107203.8 True False 86764.90939843383 120944.42337706427 107776.09832876797 94117.78612643076 99788.60838749772 112843.9754790647 110703.67448481804 113848.71075998356 113296.23838673646 106254.0577352944 0.8165797264381851 1.138256984767276 1.0143245408779151 0.8857806292998415 0.939151035870049 1.0620203866490205 1.0418771465708045 1.0714763575769441 1.0662768161662672 1.0 16.697158411807663 -6.269663014248123 24.184937406881417 1.0523941076311425 0.967813383222939 0.23077877440073968 0.08071066204898569 661.4896843603586 1945373.186761843 0.028447098550647084 0.025516287140596453 5.374486616563039e-07 6.269663014248123 -0.08458072440820352 QVVSVVQDEEVGLPFEASPES(ph)PPPASPDGVTEIR ddPTM_KYSE-520_SHP099_60min_R1 5 QVVSVVQDEEVGLPFEASPESPPPASPDGVTEIR 34 0 Q96TA1-2;Q96TA1 Q96TA1-2 FAM129B Niban-like protein 1 1 QVVSVVQDEEVGLPFEAS(0.004)PES(0.996)PPPASPDGVTEIR;QVVSVVQDEEVGLPFEAS(0.019)PES(0.97)PPPAS(0.01)PDGVTEIR;QVVSVVQDEEVGLPFEAS(0.001)PES(0.998)PPPAS(0.001)PDGVTEIR;QVVSVVQDEEVGLPFEAS(0.01)PES(0.99)PPPASPDGVTEIR;QVVSVVQDEEVGLPFEAS(0.009)PES(0.852)PPPAS(0.139)PDGVTEIR 265.45 1.0499999999999998e-41 878995000.0 501373.0 874447.0 550023.0 388245.0 425850.0 611598.0 373644.0 481174.0 575826.0 553762.0 True False 473560.8402277033 832437.2535482943 585478.362647915 425143.68806988467 459361.97224494553 607780.7900212413 411415.58193402784 479504.91970085556 471270.51379219245 548856.0995003167 0.8628142069639695 1.516676692317262 1.0667247083177898 0.7745995506963285 0.8369442785880536 1.1073590884287707 0.749587336842178 0.8736441485070513 0.8586412981858836 1.0 19.066068423758285 -5.0035049216445655 24.97915921518333 0.8850456068679742 1.21523427237319 0.33082386692456456 0.17646343089243935 139.4650359410934 993980.6456764953 0.04360967770871507 0.08786874524710717 9.919620977595455e-06 5.0035049216445655 0.33018866550521575 QVYDAHTK ddPTM_KYSE-520_SHP099_60min_R1 2 QVYDAHTK 8 0 Q03135;E9PCT5;C9JKI3;Q03135-2 Q03135 CAV1 Caveolin-1;Caveolin 0 ; 77.67699999999999 0.023587999999999998 1745420000.0 2018100.0 2003630.0 1290320.0 1390300.0 2008340.0 1969560.0 1391470.0 1907750.0 1798870.0 1643290.0 False True 1906151.9700173906 1907372.6072900558 1373496.0917849944 1522433.6939910618 2166384.932108519 1957267.2454688149 1532133.3670385224 1901132.4605221953 1472240.553822442 1628731.7290602722 1.170328996486844 1.1710784368341316 0.8432917878854482 0.9347357006850102 1.3301054393767204 1.2017124800522536 0.9406910540893778 1.1672471448806918 0.90391838481091 1.0 20.63531756420846 -7.768911801246832 24.999481934807367 0.9519591669790269 1.0899729358163108 0.13916977937000974 0.14177693427644614 415.4456030405384 1389842.3661814546 0.13435028139842212 0.0374405221655717 1.7025042265880948e-08 7.768911801246832 0.1380137688372839 QWELLLEK ddPTM_KYSE-520_SHP099_60min_R1 2 QWELLLEK 8 0 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3;A0A0D9SFF6;A0A5F9ZHC3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 125.56 0.006586 64111000.0 223100.0 236170.0 179448.0 165647.0 282060.0 250610.0 199878.0 209276.0 223650.0 204410.0 False True 210724.1982611762 224824.03870160258 191015.50520695164 181390.04107641344 304256.51729813137 249045.8500309403 220083.61886129485 208550.0704013855 183040.7977576974 202599.08642857338 1.0401043853446366 1.1096991732036494 0.9428251063426905 0.8953151974866519 1.5017664820783754 1.2292545559860744 1.0863011415349382 1.0293732024053828 0.9034630954381362 1.0 17.628268143107263 -7.407643601162844 2.847904119301031 0.954448183080666 1.1196522931243453 0.1461045588058596 0.15880688263294057 0.5949002461560973 9.07037486374648 0.1212493388749044 0.047433104711675715 3.9116176657880876e-08 7.407643601162844 0.1652041100436793 QWLQEIDR ddPTM_KYSE-520_SHP099_60min_R1 2 QWLQEIDR 8 0 E7END7;P62820-2;P62820;E9PLD0;Q9H0U4;Q92928 E7END7 RAB1A;RAB1B;RAB1C Ras-related protein Rab-1A;Ras-related protein Rab-1B;Putative Ras-related protein Rab-1C 0 ; 102.95 0.016734 698640000.0 884820.0 955790.0 721090.0 625670.0 944650.0 915080.0 721190.0 795450.0 899370.0 753820.0 False True 835737.2707550593 909872.4137299615 767572.6151847938 685133.4886854558 1018988.5806767355 909368.6462883098 794094.9233361222 792690.7696094257 736067.0792727049 747141.741263086 1.118579279672151 1.2178042846217774 1.0273453787860498 0.9170060389440942 1.3638490856555234 1.2171300250886397 1.0628437409930533 1.0609643737336056 0.9851772945095281 1.0 19.51102243902982 -7.213499540445539 2.2920558176823187 1.006178236156524 1.1398328002058506 0.2038356429079723 0.11368334591812171 0.5834877812645036 5.86983855863587 0.07922016068050668 0.035303932432529245 6.116464501761166e-08 7.213499540445539 0.13365456404932674 QWNLAS(ph)PSEETLNEGEILEYTK ddPTM_KYSE-520_SHP099_60min_R1 2 QWNLASPSEETLNEGEILEYTK 22 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 QWNLAS(0.882)PS(0.116)EET(0.002)LNEGEILEYTK;QWNLAS(0.722)PS(0.273)EET(0.005)LNEGEILEYTK 163.16 1.244e-09 119549000.0 66229.0 75093.0 62383.0 58996.0 53902.0 74264.0 66843.0 76609.0 84241.0 98356.0 True False 62555.14534576168 71485.419563109 66404.30799632907 64602.96210220585 58143.7807395727 73800.49082916786 73600.14276481415 76343.26125967504 68944.9579427954 97484.64235980998 0.6416923100038094 0.7332992954855452 0.6811771207123553 0.6626988676201958 0.5964404169937608 0.7570473568213408 0.7549921811597814 0.7831311621157375 0.7072391740262398 1.0 16.572887335473247 -10.792929816506236 0.24481816697892878 1.3054430139255002 0.654322885561821 0.789814551080313 0.04811124300630703 12.594979854556312 0.504469005629672 2.329172092553504 0.08543464881624736 1.6109059421289293e-11 10.792929816506236 -0.6511201283636792 QWVESS(ph)PKPMVSLLGSGRPTGSPLSAEFSGTR ddPTM_KYSE-520_SHP099_60min_R1 1 QWVESSPKPMVSLLGSGRPTGSPLSAEFSGTR 32 2 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 QWVES(0.262)S(0.737)PKPMVS(0.001)LLGS(0.001)GRPTGSPLSAEFSGTR 55.691 0.038256 484180000.0 61412.0 76801.0 52027.0 75945.0 94088.0 77073.0 74513.0 61026.0 109540.0 86981.0 True False 58005.35393821313 73111.36467934882 55380.74366614324 83162.78996630307 101492.19031250992 76591.95881822222 82045.50121680059 60814.31504957547 89650.29727868638 86210.41601019393 0.6728346367259647 0.8480572077358236 0.6423904004777654 0.9646489811216026 1.1772613450851344 0.8884304514800813 0.9516889607295148 0.7054172554089576 1.0399009937277846 1.0 16.39557456694296 -5.275111800544818 24.511007882496074 0.9543684299910044 0.7337903966535055 0.4436333018482247 0.12273677691018915 600.5452502434114 1076616.4386773412 0.03551995383004225 0.0530207770224658 5.30747796095731e-06 5.275111800544818 -0.2205780333374988 QWVESSPKPMVSLLGSGRPT(ph)GSPLSAEFSGTR ddPTM_KYSE-520_SHP099_60min_R1 1 QWVESSPKPMVSLLGSGRPTGSPLSAEFSGTR 32 2 Q68CZ2;Q68CZ2-2;E9PCX8 Q68CZ2 TNS3 Tensin-3 1 QWVESSPKPMVSLLGS(0.007)GRPT(0.55)GS(0.427)PLS(0.015)AEFSGTR 115.41 0.00019485 514770000.0 293490.0 329200.0 285960.0 255050.0 309730.0 342510.0 264730.0 289130.0 473660.0 295600.0 True False 277209.5246421896 313384.7378607258 304393.43915217737 279289.8753164214 334103.9888773674 340372.2680423664 291491.4919158218 288127.0755134497 387655.2839969188 292981.2139733201 0.9461682572843503 1.0696410654140567 1.038952071445429 0.9532688854987628 1.1403597669159502 1.1617545829179408 0.9949152983657377 0.9834319122579905 1.3231404114265841 1.0 18.16044863609314 -5.76676511382725 24.998086906279028 1.0975453840216347 1.009477426439322 0.18495557112694683 0.10078433313424459 258.18716290190116 1211885.0266099933 0.03076272140521959 0.035884976644139935 1.7109404191538421e-06 5.76676511382725 -0.08806795758231267 QWYESHYALPLGR ddPTM_KYSE-520_SHP099_60min_R1 4 QWYESHYALPLGR 13 0 Q5JR95;P62241 Q5JR95 RPS8 40S ribosomal protein S8 0 ;;; 150.22 1.0484000000000002e-05 5337340000.0 2668170.0 2714260.0 1892970.0 1743160.0 3238320.0 2615820.0 2073880.0 1765670.0 1819740.0 1608930.0 False True 2520161.291234972 2583862.8754126765 2014993.8750590866 1908829.402299837 3493157.3604796277 2599493.6970908362 2283528.029518318 1759545.3028804755 1489321.0879123302 1594676.1319285978 1.580359322357885 1.6203057308494098 1.263575615584186 1.197001299562503 2.1905120986886604 1.6301076093407219 1.431969779817689 1.10338724437575 0.9339332658796043 1.0 20.60483202133673 -7.252719780401291 2.5197981940688137 0.9766085692678115 1.5757928720079437 0.5096875073927312 0.2509813053513446 0.2703070019473018 3.3271075404853145 0.1741126727091214 0.07684414122815181 5.5883065244147303e-08 7.252719780401291 0.5991843027401322 QY(ph)T(ph)FKMNEDT(ph)QEEPGKSEEEK ddPTM_KYSE-520_SHP099_60min_R1 7 QYTFKMNEDTQEEPGKSEEEK 21 2 A0A5F9ZHS1;A0A5F9ZGX3;A0A5F9ZHR8;A0A087WZU3;A0A5F9ZHE4;D6RHE1;A0A5F9ZHD2;A0A5F9ZGY3;I6L894;A0A5F9ZI40;A0A5F9ZHN5;A0A5F9ZH19;A0A5F9ZHT8;A0A5F9ZI46;A0A5F9ZI65;A0A5F9ZGZ5;A0A5F9ZHT4;A0A5F9ZHF7;A0A5F9ZGY4;A0A5F9ZI30;A0A5F9ZH30;Q01484 A0A5F9ZHS1 ANK2 Ankyrin-2 3 QY(0.999)T(0.997)FKMNEDT(0.669)QEEPGKS(0.336)EEEK;QY(0.987)T(0.973)FKMNEDT(0.729)QEEPGKS(0.311)EEEK;QY(0.988)T(0.989)FKMNEDT(0.65)QEEPGKS(0.373)EEEK;QY(0.992)T(0.989)FKMNEDT(0.892)QEEPGKS(0.128)EEEK;QY(0.99)T(0.984)FKMNEDT(0.686)QEEPGKS(0.34)EEEK;QY(0.996)T(0.996)FKMNEDT(0.876)QEEPGKS(0.132)EEEK;QY(0.999)T(0.998)FKMNEDT(0.904)QEEPGKS(0.099)EEEK 82.486 0.0023098000000000003 40366060000.0 7078680.0 5244950.0 5152360.0 4523370.0 6453700.0 5882150.0 6194640.0 6780560.0 7168310.0 6381020.0 True False 6686011.509401263 4992974.729169551 5484489.369667477 4953269.72479922 6961569.473470011 5845437.3199772425 6820854.66506034 6757039.819954607 5866725.602389803 6324489.127158435 1.0571623059150168 0.7894668848000491 0.8671829865460823 0.7831889066784913 1.1007323016140298 0.9242544658470417 1.0784831039981437 1.0683929854411047 0.9276204740707171 1.0 22.592517517355326 -5.7619572145616145 24.99999981372735 1.0184790254694331 0.867689511030782 0.3785667273247163 0.08915822746780837 13.854587766850317 668883.6829744602 0.026069874882603976 0.031380433127827435 1.7299867841229279e-06 5.7619572145616145 -0.15078951443865118 QYAENYTRPS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 QYAENYTRPSSR 12 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 QYAENYTRPS(0.5)S(0.5)R 120.29 0.00019709 1447700000.0 1685900.0 1524700.0 1325600.0 1481600.0 1449200.0 1502300.0 1389200.0 1501600.0 1728600.0 1430100.0 True False 1592379.7662416718 1451451.123378641 1411050.2970349921 1622410.8185407189 1563243.795179932 1492923.5884501096 1529633.8932854584 1496391.300076075 1414729.8144598969 1417430.426600963 1.1234271089130223 1.024001669598176 0.9954988058346745 1.1446140763545654 1.1028716230740392 1.0532605766268057 1.0791597700873137 1.0557070541123221 0.9980947127348307 1.0 20.43484649273782 -7.691144204871723 3.5184742960729385 0.9970380596358411 1.072425352842664 0.3361184269309725 0.04177368311257206 0.29173522245351036 6.771041846857385 0.03687153506891138 0.011354338868696748 2.036365802413369e-08 7.691144204871723 0.0753872932068228 QYAENYTRPSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 7 QYAENYTRPSSR 12 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 QYAENYT(0.003)RPS(0.099)S(0.898)R;QYAENYTRPS(0.084)S(0.916)R;QYAENYTRPS(0.121)S(0.879)R;QYAENYT(0.004)RPS(0.114)S(0.882)R;QYAENYTRPS(0.119)S(0.881)R;QYAENYT(0.001)RPS(0.084)S(0.915)R;QYAENYTRPS(0.229)S(0.771)R 197.06 8.0234e-08 11726200000.0 9453990.0 8974580.0 7999250.0 7812030.0 7761650.0 8027570.0 7896190.0 8334290.0 9512230.0 8085760.0 True False 8929558.328638166 8543427.705680776 8514894.454252532 8554482.98242753 8372447.69725251 7977466.957954097 8694413.944588047 8305380.293227911 7785048.815804619 8014126.457026089 1.1142272806051752 1.0660460315285694 1.062485662025886 1.0674255052374053 1.0447112036661559 0.995425640053402 1.0848860435644287 1.0363425555815227 0.9714157690860201 1.0 22.934113843940032 -1.0000000000125058 0.173008709169035 0.9892192414873149 1.4580661222544964 0.5604175185067641 0.027816609237580843 48.01868763295271 0.5255975230214819 0.07093086956923578 5.856779337089711 0.09999999999712043 1.0000000000125058 0.4688468807671815 QYDIDDAIAK ddPTM_KYSE-520_SHP099_60min_R1 1 QYDIDDAIAK 10 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 101.95 0.014695 0.0 452950.0 602460.0 500670.0 337690.0 569730.0 611820.0 370430.0 467220.0 575280.0 455770.0 False True 427823.96056656033 573516.9172891031 532943.9893003239 369783.9560697993 614564.5096797291 608001.4044368936 407876.6794484109 465599.32286996767 470823.6536286532 451732.23238369456 0.9470742397747989 1.269594853266894 1.1797785304982384 0.8185910359296885 1.3604619409972216 1.3459331897318905 0.9029169277917867 1.0306975891737886 1.042262694305025 1.0 18.785108332292527 -6.786750365520377 24.998833436839128 0.9965274753903067 1.1542150450857662 0.18980083581387064 0.16150692331466557 425.58590363630054 420333.11371898657 0.06949053846555905 0.04687083548177765 1.6339909035496036e-07 6.786750365520377 0.1576875696954595 QYDPPAESQQSES(ph)PPRR ddPTM_KYSE-520_SHP099_60min_R1 4 QYDPPAESQQSESPPRR 17 1 Q6P597;Q6P597-3;K7ENJ3;K7EL76 Q6P597 KLC3 Kinesin light chain 3 1 QYDPPAES(0.028)QQS(0.396)ES(0.576)PPRR;QYDPPAESQQS(0.066)ES(0.933)PPRR;QYDPPAESQQS(0.044)ES(0.956)PPRR;QYDPPAES(0.001)QQS(0.271)ES(0.728)PPRR 176.11 1.5675e-08 2528180000.0 1204920.0 1290570.0 1189240.0 1018030.0 1147640.0 1131780.0 1043554.0 1013937.0 1443430.0 1022000.0 True False 1138080.6856515284 1228569.0800149369 1265900.313251278 1114783.2651181202 1237952.738821624 1124716.141207525 1149046.6224255776 1010419.8892016748 1181339.4979092046 1012945.8751039696 1.1235355349413065 1.2128674494960903 1.2497215738415883 1.1005358652590376 1.2221311811892808 1.1103417950066514 1.1343613224227194 0.9975062972618991 1.1662414813505715 1.0 19.950125657771974 -7.139688335715542 0.5022329883096588 1.0161937615135823 1.1969932895998163 0.41947074000684204 0.06224608260329305 0.817935081941323 0.4676622999061424 0.06045060249570455 0.043456033983325926 7.249560262003246e-08 7.139688335715542 0.180799528086234 QYHES(ph)EEES(ph)EEEEAA ddPTM_KYSE-520_SHP099_60min_R1 2 QYHESEEESEEEEAA 15 0 E9PNH5;Q8N9N8 E9PNH5 EIF1AD Probable RNA-binding protein EIF1AD 2 QYHES(1)EEES(1)EEEEAA;QYHES(1)EEES(1)EEEEAA 131.48 3.8018e-05 315180000.0 321850.0 312410.0 280890.0 286570.0 306530.0 289100.0 282170.0 297550.0 332190.0 296110.0 True False 303996.3389079319 297401.3546630295 298996.6188398904 313805.52663958777 330652.16708287643 287295.6196637999 310694.49731381924 296517.8684986921 271872.66982843523 293486.69577009435 1.0358096066680664 1.0133384543468429 1.0187740130956815 1.0692325449921258 1.1266342626375678 0.9789050877074704 1.0586323052858408 1.0103281435659088 0.9263543245633503 1.0 18.162935579538587 -7.5482634602089345 5.97339759268013 0.9635762992636301 1.042276995154082 0.3829749869226543 0.04035284177605804 0.18030380285779485 20.53280104122717 0.027693272823920735 0.010520848737205778 2.829674882321186e-08 7.5482634602089345 0.07870069589045192 QYLRIEISES(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 QYLRIEISESR 11 1 Q9NV58-2;Q9NV58-3;Q9NV58 Q9NV58-2 RNF19A E3 ubiquitin-protein ligase RNF19A 1 QYLRIEIS(0.091)ES(0.908)R 59.898 0.025317 539620000.0 137550.0 132390.0 149900.0 133820.0 168410.0 150330.0 153810.0 179370.0 206860.0 122890.0 True False 129919.82730087318 126029.78567855852 159562.79384848016 146538.21256555006 181662.90887817595 149391.7347079179 169358.61584094187 178747.80733527275 169299.43851624092 121801.29020697328 1.066653949889236 1.0347163438449616 1.3100254814816812 1.203092449320874 1.4914694956800671 1.2265201333586944 1.3904500974756167 1.4675362389965818 1.3899642460975203 1.0 16.894169889826735 -4.782848639801612 6.125253793404207 1.330181256193071 1.049053172121327 0.35580431763732223 0.13741335846732972 0.14118526408203774 17.792572599834298 0.03434834779468279 0.07793715944869865 1.6487369087573614e-05 4.782848639801612 -0.28112808407174406 QYMEGFNDELEAFK ddPTM_KYSE-520_SHP099_60min_R1 1 QYMEGFNDELEAFK 14 0 Q16543;K7EKQ2;K7EQA9;K7EL68 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed 0 196.93 4.3844e-10 80545000.0 69105.0 84428.0 68428.0 53835.0 73638.0 84820.0 68060.0 71740.0 81456.0 76433.0 False True 65271.6078925979 80371.95215098842 72838.97836867109 58951.46221391704 79432.89165709351 84290.60691761851 74940.16900158966 71491.15068424185 66665.6437386587 75755.86308397427 0.8616047027309989 1.0609337532317107 0.9614962512925256 0.7781768936956102 1.0485378744750529 1.1126611655679193 0.9892325946906522 0.9437045236352855 0.8800063919113537 1.0 16.209069929057012 -4.220668905532837 22.18173675310092 0.9736892905635973 0.8616032830436693 0.1241333077206822 0.09028304365174405 13072.373472295329 7111565.86492546 0.02376651096227071 6.113778676569893 6.016322309693009e-05 4.220668905532837 -0.11208600751992803 QYPWGVAEVENGEHCDFTILR ddPTM_KYSE-520_SHP099_60min_R1 2 QYPWGVAEVENGEHCDFTILR 21 0 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181 G3V1Q4 SEPT7 Septin-7 0 ; 264.72 2.5904e-35 999280000.0 630690.0 474250.0 300110.0 500990.0 483360.0 414080.0 376360.0 439520.0 328530.0 348150.0 False True 595704.3684506556 451466.3181362374 319455.57079297735 548603.9389718646 521397.6820578053 411495.57312482334 414406.1417196343 437995.4077047389 268877.23356734327 345065.66185660136 1.7263507624766556 1.3083490130752358 0.9257819774768932 1.5898537571665057 1.5110100473413146 1.1925138273996911 1.200948652757714 1.269310325890254 0.7792059984197452 1.0 18.396511390012627 -7.358369252793539 1.1561173389912132 0.9158404714747665 1.3729774936248693 0.38223794696111013 0.2235950771759268 0.573654500756221 1.348597784377682 0.2037748733971424 0.07559853825677756 4.38158001660577e-08 7.358369252793539 0.45713702215010277 QYQDFLEDLEEDEAIRK ddPTM_KYSE-520_SHP099_60min_R1 2 QYQDFLEDLEEDEAIRK 17 1 C9JA08;Q96D46 C9JA08 NMD3 60S ribosomal export protein NMD3 0 ; 163.66 3.3422e-05 0.0 67759.0 63555.0 46792.0 42363.0 65998.0 66302.0 49851.0 49288.0 53236.0 56577.0 False True 64000.27319578237 60501.72240200015 49808.28718984713 46389.16678309962 71191.66712274718 65888.1846245218 54890.425578875176 49117.03143190566 43569.68437035002 56075.771796239904 1.1413177410796482 1.0789280372607735 0.8882318618963166 0.8272586412481655 1.2695619666445832 1.1749848912278344 0.9788617048077043 0.8759046885770932 0.7769787730905834 1.0 15.775089951462785 -7.102650603830435 3.88257292871341 0.8714655490610254 1.0560789401159034 0.26556478829136543 0.13203959379622138 0.35060309310354415 9.371308630186263 0.07198572480449314 0.04008752418529664 7.894950223126499e-08 7.102650603830435 0.18461339105487806 QYSS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 2 QYSSLPR 7 0 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 QYS(0.051)S(0.949)LPR;QYS(0.112)S(0.888)LPR 79.906 0.015295 678820000.0 1712750.0 1535740.0 1575260.0 1513690.0 1537320.0 1512690.0 1489130.0 1591840.0 1843520.0 1478210.0 True False 1617740.3432175247 1461960.7452072655 1676803.7801051135 1657550.6424925085 1658298.3378457157 1503248.740606136 1639665.7929082757 1586318.27857825 1508783.2393573476 1465114.209429978 1.1041735400593296 0.997847632490071 1.144486736469163 1.131345687471969 1.1318560199418848 1.0260283675707402 1.1191385506705374 1.0827267037396546 1.0298058879275764 1.0 20.482581700153258 -7.8529443802422225 2.801365424470519 1.001117823251303 1.0928054351021652 0.33488483749166875 0.04473086728814965 0.296406161606229 4.49682221360131 0.043186803745160776 0.0118462291210214 1.4029933733308837e-08 7.8529443802422225 0.09168761185086227 RAADEDWDS(ph)ELEDDLLGEDLLSGK ddPTM_KYSE-520_SHP099_60min_R1 4 RAADEDWDSELEDDLLGEDLLSGK 24 1 Q96EV2;A8MTF7;Q96EV2-2 Q96EV2 RBM33 RNA-binding protein 33 1 RAADEDWDS(1)ELEDDLLGEDLLSGK;RAADEDWDS(1)ELEDDLLGEDLLSGK;RAADEDWDS(1)ELEDDLLGEDLLSGK;RAADEDWDS(1)ELEDDLLGEDLLSGK 199.64 1.2482e-15 1974372000.0 131320.0 140166.3 136760.0 110920.3 119842.0 127296.3 101402.8 115028.8 184780.0 115705.2 True False 124035.41782007013 133432.50055409427 145575.76842373688 121462.13196259583 129272.88359229472 126501.79657353499 111653.58461995871 114629.79194072362 151228.60992473652 114680.14194528354 1.0815771215146404 1.1635187948909054 1.2694069431235473 1.0591383120239608 1.1272473280855695 1.103083711161535 0.9736087061457521 0.9995609527185279 1.3186991867946158 1.0 16.807256069823996 -5.305900125407793 24.997659530494676 1.0811464567231406 1.1707029483737688 0.1384584391863537 0.10102723398949025 862.4250569808145 484888.85452907707 0.028448552055362394 0.04219617144365541 4.94424376562633e-06 5.305900125407793 0.08955649165062818 RAADEDWDS(ph)ELEDDLLGEDLLSGKK ddPTM_KYSE-520_SHP099_60min_R1 7 RAADEDWDSELEDDLLGEDLLSGKK 25 2 Q96EV2;A8MTF7;Q96EV2-2 Q96EV2 RBM33 RNA-binding protein 33 1 RAADEDWDS(1)ELEDDLLGEDLLSGKK;RAADEDWDS(1)ELEDDLLGEDLLSGKK;RAADEDWDS(1)ELEDDLLGEDLLSGKK;RAADEDWDS(1)ELEDDLLGEDLLSGKK;RAADEDWDS(1)ELEDDLLGEDLLSGKK;RAADEDWDS(1)ELEDDLLGEDLLSGKK;RAADEDWDS(1)ELEDDLLGEDLLSGKK 239.31 8.087e-29 669880000.0 548699.0 628316.0 603609.0 495511.0 533708.0 480895.0 379664.0 447511.0 839386.0 427993.0 True False 518261.57266566105 598130.7562384562 642518.6019485472 542604.216459185 575707.783216873 477893.55592605675 418044.1422835663 445958.6887908524 686974.6615991172 424201.3149935153 1.2217349507122193 1.4100162708067034 1.5146549037887098 1.2791196002480087 1.357156998029753 1.126572547125089 0.985485257842628 1.0512902082768643 1.6194543423553953 1.0 18.6943895675629 -6.256104756746861 22.363326048793212 1.1490738930726803 1.3639911036781707 0.23011685447346897 0.18237724244075967 154.51536006664787 647745.1778709779 0.06142411006444182 0.05954275351911612 5.544919470890925e-07 6.256104756746861 0.2149172106054904 RAAEDDEDDDVDTK ddPTM_KYSE-520_SHP099_60min_R1 3 RAAEDDEDDDVDTK 14 1 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 0 ;; 174.24 1.1e-07 1782740000.0 1610330.0 1735160.0 1501430.0 987840.0 1383790.0 1688460.0 1070330.0 1404970.0 1835570.0 1680230.0 False True 1521001.7847867305 1651800.3090717413 1598214.5801729395 1081724.016595074 1492686.4003119227 1677921.6948375646 1178529.4018141546 1400096.4869924642 1502276.7589541543 1665344.4693991598 0.913325628862534 0.991867051786406 0.9596900878708654 0.6495497096677839 0.8963229096082863 1.0075523266624486 0.7076790558768641 0.8407248546588115 0.9020816933424959 1.0 20.667389192802627 RAAEDDEDDDVDTKK ddPTM_KYSE-520_SHP099_60min_R1 8 RAAEDDEDDDVDTKK 15 2 B8ZZQ6;P06454-2;P06454;B8ZZA1;B8ZZW7;H7C2N1 B8ZZQ6 PTMA Prothymosin alpha;Prothymosin alpha, N-terminally processed;Thymosin alpha-1 0 ;;;;;;; 216.99 2.2644999999999998e-14 12122160000.0 14345380.0 14903780.0 9625400.0 8055510.0 13029850.0 14409370.0 8946030.0 11664160.0 13138300.0 12426700.0 False True 13549613.174593957 14187780.037770133 10245868.685184516 8821103.248422608 14055225.065294819 14319435.776945604 9850382.017239062 11623699.75139542 10752715.909590697 12316609.105826309 1.1001090525950346 1.1519225718593826 0.8318741462971135 0.7161957623750379 1.1411602775187586 1.1626118563892613 0.7997641179161389 0.9437418733941055 0.873025669419368 1.0 23.55410178553978 -4.746665835402393 24.996466476631387 0.9345926760111597 1.1260159274048112 0.24708340667964834 0.1343817900663451 360.7134493741324 610308.1079350812 0.036513212908659144 0.09572514818390572 1.79198415233137e-05 4.746665835402393 0.19142325139365146 RAAPTT(ph)PPPPVK ddPTM_KYSE-520_SHP099_60min_R1 2 RAAPTTPPPPVK 12 1 C9JC20;C9JMQ4;C9JSC3;Q9NZQ3-5;Q9NZQ3-4;Q9NZQ3-3;Q9NZQ3-2;Q9NZQ3 C9JC20 NCKIPSD NCK-interacting protein with SH3 domain 1 RAAPT(0.152)T(0.848)PPPPVK;RAAPT(0.003)T(0.997)PPPPVK 83.087 0.0071003 2125350000.0 2308800.0 2301600.0 1830750.0 1358760.0 1571200.0 2052770.0 1536960.0 1815080.0 2335700.0 2150000.0 True False 2180726.261521304 2191027.6812279685 1948763.07430357 1487896.1418739096 1694844.5010948868 2039957.9009936324 1692330.9160840919 1808783.9111228585 1911595.758205473 2130952.672674687 1.023357435143852 1.0281916202661965 0.9145032169379717 0.6982304961312733 0.7953459139792088 0.957298548744003 0.7941663546942811 0.8488146800804097 0.89706157378245 1.0 21.023067121311172 -4.897767835909237 4.218040743235495 0.8460266465631825 1.024511263657463 0.3987967035142925 0.08148841900967312 0.19446594485360783 6.2026251075791095 0.02161058351801866 0.04848410180516748 1.2654126279062613e-05 4.897767835909237 0.17848461709428043 RAAS(ph)SDQLR ddPTM_KYSE-520_SHP099_60min_R1 2 RAASSDQLR 9 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 RAAS(0.597)S(0.403)DQLR;RAAS(0.868)S(0.132)DQLR 95.17 0.002879 799190000.0 1461220.0 1087030.0 913090.0 780320.0 844450.0 1030220.0 964670.0 909960.0 1124440.0 1017690.0 True False 1380163.2137301462 1034807.4471347046 971949.2423956561 854481.3781882381 910903.4107367463 1023790.0148392959 1062188.257871929 906803.56114626 920270.0408256883 1008674.0583508381 1.368294546988435 1.025908655593457 0.9635909978539288 0.8471332945602845 0.9030701277537118 1.0149859673333643 1.0530540059774964 0.8990055346807131 0.9123562098249174 1.0 19.94402862843826 -4.235676295091139 2.4287314679124457 0.9465615389411052 1.4816919291703101 0.8203675834469312 0.05862148149444309 0.25772492884367926 1.7691965478375509 0.01673606475067447 0.29594411935529186 5.811974563472012e-05 4.235676295091139 0.5351303902292049 RAAS(ph)SDQLRDNS(ph)PPPAFKPEPPK ddPTM_KYSE-520_SHP099_60min_R1 7 RAASSDQLRDNSPPPAFKPEPPK 23 3 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 2 RAAS(0.978)S(0.022)DQLRDNS(1)PPPAFKPEPPK;RAAS(0.939)S(0.061)DQLRDNS(1)PPPAFKPEPPK;RAAS(0.907)S(0.109)DQLRDNS(0.984)PPPAFKPEPPK;RAAS(0.81)S(0.19)DQLRDNS(1)PPPAFKPEPPK;RAAS(0.978)S(0.024)DQLRDNS(0.999)PPPAFKPEPPK;RAAS(0.977)S(0.023)DQLRDNS(1)PPPAFKPEPPK;RAAS(0.821)S(0.179)DQLRDNS(0.999)PPPAFKPEPPK 156.26 1.3595e-07 22884900000.0 9018570.0 7062500.0 6408770.0 5081440.0 5669990.0 5853630.0 4895890.0 5273700.0 8236530.0 5437310.0 True False 8518291.944026414 6723206.898971377 6821889.568594559 5564378.529809356 6116185.955169933 5817095.323876204 5390814.340481818 5255406.765590834 6740983.778024622 5389139.663563172 1.580640413092267 1.2475473486849942 1.2658587445262248 1.0325170393023957 1.1349095286066597 1.079410757009418 1.000310750328103 0.975184740733938 1.2508459974792419 1.0 22.361623545051472 -1.0000062091434498 0.6109261655378065 1.054878128845401 36.81746389637178 0.7721987028369433 0.08438479692562402 79.18500886385077 0.5906756430060419 0.036033162447977114 3791.759777733938 0.09999857030210549 1.0000062091434498 35.762585767526375 RAAVAASSS(ph)S ddPTM_KYSE-520_SHP099_60min_R1 3 RAAVAASSSS 10 1 P61927 P61927 RPL37 60S ribosomal protein L37 1 RAAVAASS(0.051)S(0.475)S(0.475);RAAVAASS(0.012)S(0.494)S(0.494);RAAVAASS(0.029)S(0.932)S(0.04) 120.65 0.00054208 2363980000.0 3043030.0 2491530.0 2700390.0 2726100.0 2675970.0 3116090.0 3203530.0 2262960.0 3605270.0 3117450.0 True False 2874227.0597700854 2371833.158937226 2874461.460176768 2985187.724368149 2886553.614813447 3096641.326455105 3527374.0758398827 2255110.319938837 2950643.8494607387 3089831.818339397 0.9302211993256039 0.7676253266794135 0.9302970611913828 0.9661327541032676 0.9342105928486424 1.002203844259513 1.1416071434385184 0.7298488890410955 0.9549528980663213 1.0 21.559096882712403 -4.959548516340554 11.821640543957782 0.957356390225308 0.8488112382257917 0.15912106327609998 0.10167357594525102 1.4322613813060294 412.9241733098229 0.026780928319468388 0.055747593470364745 1.0976186651477177e-05 4.959548516340554 -0.10854515199951631 RADDDRFPR ddPTM_KYSE-520_SHP099_60min_R1 2 RADDDRFPR 9 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 100.48 0.026652999999999996 1340880000.0 998700.0 1044420.0 695830.0 636610.0 1044620.0 975790.0 731880.0 773050.0 902010.0 863590.0 False True 943300.1201409069 994244.4954936194 740684.315167364 697113.2229962251 1126825.6509252437 969699.7326590772 805865.5728604669 770368.469981226 738227.7218216886 855939.2644628534 1.1020643161321464 1.1615829963327593 0.8653468136342385 0.8144423932154813 1.3164785139660413 1.1329071733467144 0.9414985458882875 0.9000270252407131 0.8624767579566116 1.0 19.707148904279432 -6.897876898550476 6.395629236498178 0.9129652306267164 1.0603419491025274 0.19543081803052986 0.13846746651664477 0.38914710561436805 21.037419007674735 0.0634850073612757 0.042583258312905485 1.265094889777407e-07 6.897876898550476 0.14737671847581102 RADDFPVRDDPS(ph)DVT(ph)DEDEGPAEPPPPPK ddPTM_KYSE-520_SHP099_60min_R1 2 RADDFPVRDDPSDVTDEDEGPAEPPPPPK 29 2 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 2 RADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPK;RADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPK 166.07 1.2120999999999998e-09 2102200000.0 2100560.0 1837350.0 1830090.0 1644630.0 1921280.0 2017130.0 1866230.0 1914000.0 2210800.0 1902580.0 True False 1984037.749437455 1749080.9480814238 1948060.529647532 1800935.1407239588 2072473.8054121593 2004540.343453617 2054886.7410496152 1907360.7807309579 1809374.4497326978 1885724.6213848393 1.0521354639684433 0.9275378431432544 1.0330567398631696 0.9550361279163802 1.0990331153920954 1.0630079921115534 1.089706692984974 1.0114736579778172 0.9595114945277262 1.0 20.846687579181488 -3.8901385794026098 20.90777513773446 1.0190023119108482 7.617182610416571 0.035355109599366275 0.05472879811248119 4129.954525442055 797525.3301941894 0.013732944875755462 19181.77125720778 0.0001287838548604382 3.8901385794026098 6.5981802985057225 RADDFPVRDDPS(ph)DVT(ph)DEDEGPAEPPPPPKLPLPAFR ddPTM_KYSE-520_SHP099_60min_R1 5 RADDFPVRDDPSDVTDEDEGPAEPPPPPKLPLPAFR 36 3 Q3YEC7;Q3YEC7-2 Q3YEC7 RABL6 Rab-like protein 6 2 RADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPKLPLPAFR;RADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPKLPLPAFR;RADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPKLPLPAFR;RADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPKLPLPAFR;RADDFPVRDDPS(1)DVT(1)DEDEGPAEPPPPPKLPLPAFR 225.09 2.3699e-22 4606560000.0 1171420.0 1289600.0 1205089.0 917130.0 925642.0 968651.0 809951.0 889430.0 1509840.0 900193.0 True False 1106438.997432124 1227645.6802709354 1282770.9651505738 1004293.75945481 998484.7592174597 962605.2898061567 891828.751440001 886344.7749245237 1235691.1159690665 892217.9903595557 1.2400994032705386 1.3759481354732663 1.4377326830561092 1.1256147828291254 1.119104041844168 1.0788902490278587 0.9995637401131108 0.9934172864720368 1.384965478527388 1.0 19.767036712820484 -5.350237338330569 5.687056660522819 1.0933238754559345 1.3528422934207032 0.4965615732349261 0.11591811182175625 0.18148312970282837 9.151687638350868 0.0326845319266307 0.049027294883088775 4.46439549964038e-06 5.350237338330569 0.2595184179647687 RADEWKDPWR ddPTM_KYSE-520_SHP099_60min_R1 2 RADEWKDPWR 10 2 E7ERS3;Q86VM9;H3BP01 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 0 ; 123.67 0.00030777 1495790000.0 2267690.0 2069230.0 1689930.0 1592730.0 2178230.0 1913450.0 1726370.0 1841770.0 1861790.0 1420070.0 False True 2141896.7151720575 1969821.0848224494 1798865.591783602 1744102.5803282622 2349644.3085666443 1901507.4487917612 1900888.3273475496 1835381.3297423495 1523735.8679065686 1407489.2845977428 1.521785450597023 1.3995282993471738 1.2780669888351681 1.239158691589416 1.669386995893306 1.3509924868346033 1.3505526103460312 1.304010872286603 1.0825914517296298 1.0 20.424692508243147 -7.731269436143131 1.628145513124365 0.993502960164023 1.4025227375337588 0.6091375181708534 0.1149938335925042 0.25435094469795266 1.3069699354128943 0.11102590584918325 0.03365146983356321 1.8566522313207145e-08 7.731269436143131 0.4090197773697358 RADLNQGIGEPQS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 13 RADLNQGIGEPQSPSR 16 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.994)PS(0.006)R;RADLNQGIGEPQS(0.925)PS(0.075)R;RADLNQGIGEPQS(0.9)PS(0.1)R;RADLNQGIGEPQS(0.979)PS(0.021)R;RADLNQGIGEPQS(0.5)PS(0.5)R;RADLNQGIGEPQS(1)PSR;RADLNQGIGEPQS(0.957)PS(0.043)R;RADLNQGIGEPQS(0.886)PS(0.114)R;RADLNQGIGEPQS(0.998)PS(0.002)R;RADLNQGIGEPQS(0.912)PS(0.088)R;RADLNQGIGEPQS(0.905)PS(0.095)R;RADLNQGIGEPQS(0.917)PS(0.083)R;RADLNQGIGEPQS(0.99)PS(0.01)R 308.93 5.6393e-47 41667050000.0 20722990.0 18839040.0 17927820.0 15785310.0 16870792.0 16386560.0 14694880.0 15101614.0 20381240.0 16796140.0 True False 19573444.4344436 17933984.240424436 19083475.9627262 17285541.11637351 18198427.348724276 16284285.400754197 16180381.878608264 15049230.025777211 16680520.585249688 16647339.266799191 1.1757701408464787 1.0772883253596734 1.146337901624048 1.0383365677449203 1.0931733328111186 0.9781914779156898 0.9719500287278815 0.9040021221764137 1.0019931904984163 1.0 23.988788274941097 -6.018415584257979 1.0416739116754439 0.9570695947026668 1.1280325435419634 0.7217720561622578 0.042176786877592534 0.2544606476708182 0.5908196075259788 0.019996091853939017 0.023102437470560448 9.58483002787681e-07 6.018415584257979 0.17096294883929652 RADLNQGIGEPQS(ph)PSRR ddPTM_KYSE-520_SHP099_60min_R1 11 RADLNQGIGEPQSPSRR 17 2 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.514)PS(0.486)RR;RADLNQGIGEPQS(0.804)PS(0.196)RR;RADLNQGIGEPQS(0.633)PS(0.367)RR;RADLNQGIGEPQS(0.518)PS(0.482)RR;RADLNQGIGEPQS(0.862)PS(0.138)RR;RADLNQGIGEPQS(0.705)PS(0.295)RR;RADLNQGIGEPQS(0.968)PS(0.032)RR;RADLNQGIGEPQS(0.881)PS(0.119)RR;RADLNQGIGEPQS(0.983)PS(0.017)RR;RADLNQGIGEPQS(0.988)PS(0.012)RR;RADLNQGIGEPQS(0.949)PS(0.051)RR 206.13 1.8617e-13 38218670000.0 14806600.0 14369110.0 13228440.0 10343843.0 11678372.0 12568089.0 10671557.0 11078644.0 16191050.0 11665590.0 True False 13985248.381774662 13678796.387126183 14081166.40865237 11326918.728730207 12597393.435552748 12489646.894655103 11750342.125919726 11040214.769738946 13251163.463155668 11562241.948291685 1.2095619901675707 1.183057442345532 1.2178577884484467 0.9796472673194452 1.0895286132127693 1.0802097854819965 1.0162684865503815 0.9548506958350004 1.146072147808109 1.0 23.46291783143406 -5.251950874487345 24.934397869463744 1.0391911901260182 1.2014489242208328 0.6642339813853944 0.05388269047638715 388.82429336227193 1021771.2955072584 0.01435488993199277 0.024440578516829525 5.598209224342184e-06 5.251950874487345 0.1622577340948146 RADLNQGIGEPQSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 RADLNQGIGEPQSPSR 16 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.097)PS(0.903)R;RADLNQGIGEPQS(0.206)PS(0.794)R 291.17 2.1693999999999997e-37 2450700000.0 1692160.0 1560770.0 1386470.0 1255150.0 1351580.0 1508300.0 1128150.0 1247510.0 1800150.0 1392920.0 True False 1598292.5115626706 1485788.2664364674 1475844.0746304349 1374439.0786253936 1457941.6565617546 1498886.1402245238 1242194.4116829764 1243182.6789810231 1473288.1380886158 1380579.8124753602 1.1576965685866103 1.0762059918669025 1.069003082106689 0.9955520616812755 1.056035763660549 1.085693218660819 0.8997628391043465 0.9004786740666691 1.0671517320299149 1.0 20.396842863069804 -2.0867976291910537 0.35192284953137865 0.9724547102946276 1.974841178402418 0.4310710090877028 0.05888212418484878 28.02650887479377 0.8030259322614015 0.05298739476562811 16.303870134476853 0.008188462619613247 2.0867976291910537 1.0023864681077903 RADLNQGIGEPQSPS(ph)RR ddPTM_KYSE-520_SHP099_60min_R1 1 RADLNQGIGEPQSPSRR 17 2 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 1 RADLNQGIGEPQS(0.24)PS(0.76)RR 120.33 7.75e-05 438930000.0 125460.0 143510.0 108480.0 92396.0 115790.0 119310.0 81336.0 89686.0 134830.0 110470.0 True False 118500.48370169057 136615.56418709847 115472.794374137 101177.28806012977 124902.01424502082 118565.34203420252 89558.23664286367 89374.90019886983 110348.27078770557 109491.32174435945 1.0822819727974946 1.2477296100787674 1.0546296504095831 0.9240667337668889 1.140748072588276 1.0828743332830442 0.8179482649041758 0.8162738267745322 1.0078266389490387 1.0 16.740457001135113 -6.7447404792943875 23.98897384847239 0.8952017036964243 1.089280328829594 0.44947415239217625 0.09602400319174519 132.690323104793 190617.48235192354 0.03817672255343519 0.029475814470530482 1.799946184979449e-07 6.7447404792943875 0.19407862513316976 RADNCS(ph)PVAEEETTGSAESTLPK ddPTM_KYSE-520_SHP099_60min_R1 1 RADNCSPVAEEETTGSAESTLPK 23 1 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 RADNCS(1)PVAEEETTGSAESTLPK 125.04 3.0272e-07 615360000.0 1243000.0 1059300.0 1105100.0 943510.0 1193200.0 1175500.0 975870.0 1074900.0 1404600.0 1124100.0 True False 1174048.3121409325 1008409.6379582844 1176336.5142225185 1033180.9067233753 1287098.0516206836 1168163.268470414 1074520.4631733948 1071171.4227835448 1149560.0470845618 1114141.3485365666 1.0537696259842202 0.9051002723153919 1.055823406758618 0.9273337786811938 1.1552376664875574 1.0484874921883167 0.9644381878338739 0.9614322493196549 1.0317901302150916 1.0 20.08750084499726 RADS(ph)GEEENTK ddPTM_KYSE-520_SHP099_60min_R1 3 RADSGEEENTK 11 1 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 RADS(1)GEEENTK;RADS(1)GEEENTK;RADS(1)GEEENTK 140.6 6.1275e-05 779553000.0 1036230.0 808510.0 762220.0 946170.0 950050.0 1088340.0 1076020.0 831940.0 1142160.0 1267640.0 True False 978748.2562267076 769667.9660017486 811353.9207951204 1036093.7123236161 1024813.529954938 1081547.2663607746 1184794.6025432032 829054.1943162555 934772.5355105384 1256409.695808998 0.7790040617256577 0.6125931442340247 0.6457717761185314 0.824646383882352 0.8156682755421303 0.8608237185437907 0.9430002064575901 0.6598597552070229 0.7440029622730995 1.0 20.260875550856795 -5.2681465855237315 23.908805252435382 0.8259731721352181 0.6724700058231248 0.34666445601551943 0.09760302247039701 329.8256776086806 1175712.7926699675 0.02767320817596625 0.04220413043202847 5.3932855457403696e-06 5.2681465855237315 -0.15350316631209338 RADS(ph)GEEENTKNGGEK ddPTM_KYSE-520_SHP099_60min_R1 1 RADSGEEENTKNGGEK 16 2 Q9BVG4 Q9BVG4 PBDC1 Protein PBDC1 1 RADS(0.806)GEEENT(0.194)KNGGEK 85.51799999999999 0.0014864000000000001 0.0 248090.0 283570.0 290520.0 206260.0 201100.0 217500.0 173200.0 191580.0 316230.0 189900.0 True False 234327.95314484602 269946.871552752 309247.3840484352 225862.88838566985 216925.42589751875 216142.50182247147 190708.7462691056 190915.45369510827 258810.6035095763 188217.63373996425 1.2449840564279242 1.434227315415634 1.6430308781571548 1.2000091803179034 1.1525244557968268 1.148364781384338 1.0132352770547686 1.0143335132927622 1.3750603403459059 1.0 17.522042272096485 -5.453190597807204 6.341607599951274 1.1192995673596817 1.4399955598895875 0.5334811566042388 0.13540113724871977 0.18272179480078776 13.337917531811883 0.03860685825860409 0.05714601525787529 3.522162607886714e-06 5.453190597807204 0.32069599252990577 RAEATAASTSR ddPTM_KYSE-520_SHP099_60min_R1 3 RAEATAASTSR 11 1 O95721 O95721 SNAP29 Synaptosomal-associated protein 29 0 ;; 102.87 0.0029973 204702000.0 142720.0 125548.0 130107.0 123419.0 126907.0 129460.0 115749.0 128241.0 138048.0 113321.0 False True 134803.03709473365 119516.48562860991 138493.90539856022 135148.70465272464 136893.8588979434 128651.99211925136 127450.0385213783 127796.16190267431 112981.96310688402 112317.0641024038 1.200200861481106 1.0640990893391062 1.2330620151563967 1.2032784664804304 1.2188162145436066 1.1454358529346385 1.134734419385973 1.1378160827472985 1.0059198396057967 1.0 16.77721760454146 -7.671382408618604 1.601178458655199 0.9898016048483631 1.174711652618591 0.6614154861625678 0.047121712360899154 0.2305190946493088 1.106989735408041 0.044502436266323823 0.01375411094044319 2.1311675332193155e-08 7.671382408618604 0.1849100477702279 RAEDGS(ph)VIDYELIDQDAR ddPTM_KYSE-520_SHP099_60min_R1 1 RAEDGSVIDYELIDQDAR 18 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 1 RAEDGS(1)VIDYELIDQDAR 259.33 6.1814e-30 191410000.0 88998.0 74150.0 79846.0 73236.0 93380.0 81954.0 79838.0 77972.0 114850.0 101560.0 True False 84061.10352688545 70587.72269858092 84993.00091811706 80196.32742079378 100728.47474047901 81442.49468670733 87908.80418379244 77701.53333080161 93996.13513289327 100660.25741248447 0.8350972438151117 0.7012471904311485 0.8443550920979042 0.7967029837025568 1.0006776987238866 0.8090829169348653 0.873321869459967 0.7719186829852535 0.9337958947165907 1.0 16.619134666707133 -13.999999978279348 0.06283441025876688 1.5610183853861583 0.6099565042934594 0.34666995566526015 0.07466240370802708 443.6196974481039 2.0239959504538207 37.91081522123519 5.805681521700948 1.0000000500136506e-14 13.999999978279348 -0.951061881092699 RAEDGSVIDYELIDQDAR ddPTM_KYSE-520_SHP099_60min_R1 14 RAEDGSVIDYELIDQDAR 18 1 P07355;P07355-2;H0YN42;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YNA0 P07355 ANXA2 Annexin A2;Annexin 0 ;;;;;;;;;;;;; 261.63 2.0770999999999997e-29 28147660000.0 7478237.0 7514872.0 5303489.0 4473542.0 7487506.0 7686646.0 5926998.0 6204102.0 6510157.0 6878000.0 False True 7063404.286114128 7153846.269067157 5645360.386822425 4898706.086660558 8076730.1241184855 7638670.791097432 6526156.799766138 6182581.418210297 5328076.596502836 6817066.271003027 1.036135487806378 1.0494024826334243 0.828121682025514 0.7185944645275963 1.1847809311277413 1.1205217152705658 0.9573262955541011 0.906926993582039 0.7815791111150355 1.0 22.70071957736114 -7.2635540736992175 3.8991380936843116 0.8799671031981348 0.984979134504434 0.0819146852786018 0.1361751280029358 0.6014596651894392 21.26929724979411 0.08261507527641562 0.04038763026903143 5.450620261758815e-08 7.2635540736992175 0.10501203130629921 RAEEQMLK ddPTM_KYSE-520_SHP099_60min_R1 1 RAEEQMLK 8 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 111.46 0.0026206 328870000.0 302030.0 312350.0 187190.0 180090.0 305250.0 284350.0 211670.0 252950.0 235030.0 251700.0 False True 285275.7938181218 297344.23715309147 199256.56691458987 197205.69945396725 329271.43836508 282575.2661757229 233067.66930012454 252072.57548897376 192354.4766241522 249470.133819637 1.1435268400680447 1.191903145280175 0.7987191246654369 0.7904982309286925 1.3198831993377536 1.1327017861786228 0.9342507887883237 1.0104318766719318 0.7710521242724048 1.0 17.92850758310797 -6.822014142082218 11.155547623868898 0.9295727802287739 1.0559998253661829 0.13460606776617112 0.16582525007225324 1.4457339134041265 260.02184082983365 0.07483968182579431 0.05046989599815688 1.506558006815772e-07 6.822014142082218 0.126427045137409 RAELPGSSS(ph)PLLAQPR ddPTM_KYSE-520_SHP099_60min_R1 2 RAELPGSSSPLLAQPR 16 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 RAELPGS(0.009)S(0.073)S(0.918)PLLAQPR;RAELPGSS(0.004)S(0.996)PLLAQPR 242.9 2.3808000000000003e-23 1596960000.0 866790.0 835290.0 812120.0 643440.0 817720.0 832680.0 705170.0 837220.0 1061220.0 795590.0 True False 818707.4307969729 795161.4146041495 864470.5546379437 704592.3441427093 882069.9118096431 827482.9352530369 776455.4653959885 834315.8792286167 868529.19917918 788541.691559654 1.0382550974288427 1.0083948928957738 1.0962902328323445 0.8935384795559743 1.1186090998752394 1.0493838741948587 0.984672685930201 1.0580491661492573 1.1014372587723535 1.0 19.58882750924494 RAELYEK ddPTM_KYSE-520_SHP099_60min_R1 2 RAELYEK 7 1 Q99614;H0YB37 Q99614 TTC1 Tetratricopeptide repeat protein 1 0 ; 109.71 0.007394899999999999 995370000.0 1216090.0 1133850.0 776410.0 667280.0 1120420.0 1089310.0 890720.0 937940.0 950760.0 945450.0 False True 1148631.0634846867 1079378.144056452 826458.6308999219 730698.0905749521 1208590.6796822385 1082511.2122309725 980762.6701894787 934686.5050568418 778125.9507091817 937074.0485489686 1.2257633911250747 1.1518600325426118 0.8819565883610463 0.7797655817130102 1.2897493869921008 1.1552034910231577 1.0466223792112914 0.9974521293212378 0.8303782949854248 1.0 19.837803530062345 -7.456832133454893 3.334855310641622 0.9139645057715722 1.0708911644856463 0.15533481775928237 0.14893036829122275 0.5173111740754365 11.074805956223603 0.11008996843586959 0.043234572699932916 3.492752937235229e-08 7.456832133454893 0.15692665871407407 RAEPPKPEVVDSTESIPVS(ph)DEDS(ph)DAMVDDPNDEDFVPFRPR ddPTM_KYSE-520_SHP099_60min_R1 1 RAEPPKPEVVDSTESIPVSDEDSDAMVDDPNDEDFVPFRPR 41 3 A6NL54;A6NHN7;A6NHB5;Q14202-3;Q14202-2;Q14202 A6NL54 ZMYM3 Zinc finger MYM-type protein 3 2 RAEPPKPEVVDSTESIPVS(1)DEDS(1)DAMVDDPNDEDFVPFRPR 216.98 9.557100000000001e-23 1810000000.0 207550.0 188110.0 164000.0 190160.0 162000.0 231950.0 171430.0 191980.0 203210.0 135630.0 True False 196036.7877593326 179072.91324113356 174571.70240927776 208232.74922631122 174748.478346087 230502.31401251597 188759.81739557025 191314.0661884688 166312.18650722856 134428.42371854334 1.4582986420325843 1.3321060255535218 1.298621954942978 1.5490232159702633 1.299936973983738 1.714684347524042 1.4041659656054741 1.4231667745284924 1.2371802175962516 1.0 17.036478690099763 -8.021702553882026 2.2293235856373013 1.0007910720785962 1.436800483430108 0.5726089797196867 0.11850739538813809 0.2322407187299746 2.6731056768895316 0.11267979529515658 0.031087590041397925 9.512560811300936e-09 8.021702553882026 0.43600941135151183 RAETFAGYDCTNS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 7 RAETFAGYDCTNSPTK 16 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 RAETFAGYDCT(0.025)NS(0.971)PT(0.004)K;RAETFAGYDCTNS(0.996)PT(0.004)K;RAETFAGYDCTNS(0.998)PT(0.002)K;RAETFAGYDCT(0.003)NS(0.996)PTK;RAETFAGYDCT(0.001)NS(0.999)PTK;RAETFAGYDCTNS(0.983)PT(0.017)K;RAETFAGYDCT(0.003)NS(0.961)PT(0.036)K 464.58 2.1955999999999995e-136 14682830000.0 10069610.0 9107270.0 8680940.0 7954600.0 8571950.0 8504210.0 7978860.0 8783540.0 10417380.0 8166870.0 True False 9511028.660030136 8669743.078909041 9240527.282395106 8710602.79236231 9246513.697276156 8451132.070913475 8785441.034969492 8753071.949833643 8525846.392779265 8094517.885528705 1.1749963116436932 1.07106355208736 1.1415784624943783 1.076111377545417 1.1423180266000743 1.0440562601044245 1.0853569241814898 1.0813580343657396 1.0532864975221914 1.0 22.94851372460557 -6.24590366258814 0.01490736010645925 3.809531099357828e-07 2.1822348532268245 0.5851471964634674 0.03203603107064844 765.2039639382994 4.463008226364947 313.12314298406824 339.57296440582974 5.676705150052764e-07 6.24590366258814 2.1822344722737146 RAEVLGHKT(ph)PEPAPR ddPTM_KYSE-520_SHP099_60min_R1 9 RAEVLGHKTPEPAPR 15 2 Q9UHD8;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;K7ENL0;K7EJ51;K7ER34 Q9UHD8 SEPT9 Septin-9 1 RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR;RAEVLGHKT(1)PEPAPR 166.47 3.2158e-08 64762630000.0 44977540.0 41057790.0 39872200.0 37952440.0 36998320.0 34419490.0 33049610.0 36330650.0 45465630.0 31753770.0 True False 42482546.195696846 39085312.139400765 42442425.80977564 41559428.486782886 39909877.29235554 34204665.19564845 36390587.11191052 36204627.4547875 37210217.68726268 31472456.301859237 1.3498325579750567 1.241889472004503 1.3485577802603337 1.3205015867899628 1.268089052521708 1.086812699574002 1.1562677778588495 1.1503591301403668 1.1823105680208532 1.0 24.90758644393532 -6.131215295617276 4.241321961632996 1.1275434851103594 1.310663914808796 0.7503428845207141 0.05515207179966252 0.12216977471570042 3.635020675578201 0.017903061901334612 0.018005969154711605 7.392387166090898e-07 6.131215295617276 0.18312042969843656 RAFS(ph)TEK ddPTM_KYSE-520_SHP099_60min_R1 6 RAFSTEK 7 1 H0YJD9;Q9NZ32 H0YJD9 ACTR10 Actin-related protein 10 1 RAFS(0.995)T(0.005)EK;RAFS(0.726)T(0.274)EK;RAFS(0.791)T(0.209)EK;RAFS(0.85)T(0.15)EK;RAFS(0.996)T(0.004)EK;RAFS(0.701)T(0.299)EK 117.83 0.0017195 10475600000.0 6153520.0 6080650.0 5621240.0 6017620.0 6791260.0 6957120.0 6756170.0 7063580.0 8937850.0 7266940.0 True False 5812171.978862002 5788526.446758269 5983594.124701998 6589532.795536569 7325693.525016332 6913698.033467373 7439149.597465025 7039078.089631965 7314961.744863122 7202560.565193769 0.8069591260293191 0.8036761918714309 0.8307592932460156 0.9148875231095391 1.0170957201550794 0.9598944668202697 1.0328479059814601 0.9773021727367585 1.0156057250268091 1.0 22.780078456154975 -5.4230495123600955 2.0683940269251955 0.9998519910478058 0.8060086317186744 0.9415385555231252 0.020848283426402155 0.0643847310808717 0.5425473639976521 0.006088411215121047 0.010265261707888572 3.7752914772442546e-06 5.4230495123600955 -0.19384335932913133 RAFST(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 1 RAFSTEK 7 1 H0YJD9;Q9NZ32 H0YJD9 ACTR10 Actin-related protein 10 1 RAFS(0.444)T(0.556)EK 105.2 0.0071657 3360400000.0 1287200.0 1183500.0 1145100.0 1259000.0 1239100.0 1074100.0 1312100.0 1414400.0 1555900.0 1325400.0 True False 1215796.4500304165 1126642.883530284 1218914.978224781 1378654.9814678472 1336610.120485408 1067396.1434828357 1444739.8728619702 1409493.7765234425 1273387.7810471777 1313657.9871455973 0.9255045544024584 0.8576379046560878 0.92787848142523 1.0494778663535398 1.0174719246290904 0.8125373224442873 1.099783876015702 1.0729533792780293 0.9693449843928393 1.0 20.32515828602342 -5.061118346918773 5.4856432201050245 1.002429110222679 0.8914052317844381 0.2768193989331428 0.07509645158147592 0.27175838157075494 16.75967691579552 0.021177459256381002 0.038304880431502215 8.687236664838345e-06 5.061118346918773 -0.11102387843824091 RAGDLLEDS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 13 RAGDLLEDSPK 11 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK;RAGDLLEDS(1)PK 184.51 1.0112999999999999e-07 226788600000.0 82792920.0 72446670.0 66406010.0 63480680.0 73425570.0 70542090.0 66760630.0 69234340.0 79118270.0 68442720.0 True False 78200231.68400584 68966223.22853139 70686647.65797262 69513864.74103767 79203744.6246548 70101810.65005028 73509446.00136054 68994182.23395635 64752386.577281035 67836370.74843045 1.1527773496906184 1.016655556121818 1.042016942800675 1.0247285338838095 1.1675704898538866 1.0333956530490283 1.0836288143121418 1.0170677097367078 0.9545378955695273 1.0 26.015555651870613 -7.467042877591225 3.673880178360288 0.9779354675780086 1.0708190906464992 0.38780672346546985 0.04966942345396163 0.24623695268261503 6.585374601329941 0.032456278949893336 0.013027021109616899 3.411592275466179e-08 7.467042877591225 0.09288362306849052 RAGDLLEDS(ph)PKRPK ddPTM_KYSE-520_SHP099_60min_R1 8 RAGDLLEDSPKRPK 14 3 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 1 RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK;RAGDLLEDS(1)PKRPK 197.51 6.306e-11 50747970000.0 12310710.0 11183050.0 11653000.0 8698400.0 9605680.0 9054500.0 7690560.0 7879130.0 13772930.0 7538250.0 True False 11627810.375508046 10645799.491899734 12404171.025459237 9525093.320730686 10361592.367157029 8997987.506903755 8467996.857432649 7851799.137032763 11272113.099311097 7471466.969669764 1.556295493603981 1.4248606779787818 1.6602055628183412 1.2748625349476306 1.386821678958049 1.2043133622126503 1.1333780757926486 1.0509046173806227 1.5086880722447094 1.0 22.83296010311312 -5.755923017439957 1.2027304372698422 1.1773571124287883 1.534884750659322 0.49818909107091613 0.1498869251987111 0.39144964109998803 1.1947806343959668 0.05955595374693839 0.08737516040465934 1.7541914203175055e-06 5.755923017439957 0.3575276382305337 RAGDLLEDSPK ddPTM_KYSE-520_SHP099_60min_R1 1 RAGDLLEDSPK 11 1 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 0 117.79 0.006497399999999999 0.0 162980.0 136260.0 123720.0 133150.0 133560.0 140660.0 123630.0 133560.0 152510.0 145050.0 False True 153939.1745074247 129713.86506957038 131695.18915899907 145804.5359669926 144070.41214755145 139782.08876482229 136127.72691252612 133096.71153313818 124818.02846423644 143764.96984719243 1.0707697060768449 0.9022633622602436 0.9160450511621689 1.0141868086639467 1.002124594751306 0.9722958862189895 0.9468768856364389 0.9257937568143788 0.8682089148483482 1.0 17.133352662144986 -6.958382755281923 2.7490074640891597 0.9235501851658635 0.9758889004517128 0.1378026577857745 0.05392828009667965 0.5426109048177161 8.284386326701709 0.027320968213200583 0.016057244612994844 1.1005689213171905e-07 6.958382755281923 0.052338715285849324 RAGELTEDEVER ddPTM_KYSE-520_SHP099_60min_R1 1 RAGELTEDEVER 12 1 P62269 P62269 RPS18 40S ribosomal protein S18 0 73.156 0.0482 110900000.0 117010.0 103740.0 98831.0 116380.0 92571.0 109730.0 72529.0 86158.0 103540.0 79675.0 False True 110519.22204634783 98756.17468308545 105201.80439519093 127440.72020907718 99855.81104305941 109045.13436772327 79860.93913482662 85859.13800742828 84739.7460309948 78969.14148621203 1.3995241681289448 1.2505666495099004 1.3321887817858462 1.6138040481461768 1.264491536361633 1.3808575389763162 1.0112929890312952 1.087249226616187 1.0730741709505645 1.0 16.26900138572484 -6.758182446904287 24.999739437747067 1.0501748337297243 1.3720613646079771 0.737919090764624 0.09649942586420303 45.60776495683837 350082.2347944034 0.03890332322419448 0.02885535962909935 1.7450888879013632e-07 6.758182446904287 0.3218865308782528 RAHT(ph)LER ddPTM_KYSE-520_SHP099_60min_R1 3 RAHTLER 7 1 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 1 RAHT(1)LER;RAHT(1)LER;RAHT(1)LER 91.584 0.012709999999999999 433855000.0 217715.0 174892.0 156203.0 158298.0 162449.0 171648.0 143462.0 150765.0 174275.0 163909.0 True False 205637.91494590734 166489.92580175615 166272.09531363676 173342.59432597077 175232.81209162626 170576.68116240733 157964.53901419416 150242.03140381546 142631.0531152369 162456.89377927236 1.2657998695044874 1.0248252439687995 1.0234843929710244 1.0670067012452462 1.0786418970296967 1.0499811808181387 0.9723474045294631 0.9248116710143859 0.877962453898863 1.0 17.309697439465534 -6.795429586027119 1.9619108334758135 0.9257520990545193 1.0834046955167078 0.5065419467179622 0.06960669075132184 0.2866876492360347 2.254473112165497 0.03615117254673673 0.02234575240790859 1.6016603111497116e-07 6.795429586027119 0.15765259646218854 RAHT(ph)PTPGIYMGR ddPTM_KYSE-520_SHP099_60min_R1 8 RAHTPTPGIYMGR 13 1 Q13595;Q13595-3;Q13595-4;Q13595-2 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RAHT(0.998)PT(0.002)PGIYMGR;RAHT(0.999)PT(0.001)PGIYMGR;RAHT(0.997)PT(0.003)PGIYMGR;RAHT(0.956)PT(0.044)PGIYMGR;RAHT(0.999)PT(0.001)PGIYMGR;RAHT(0.986)PT(0.014)PGIYMGR;RAHT(0.992)PT(0.008)PGIYMGR;RAHT(0.991)PT(0.009)PGIYMGR 186.94 5.1715e-08 14529720000.0 1774620.0 1562730.0 1751900.0 1417920.0 1393512.0 1489120.0 1421185.0 1407550.0 1996360.0 1548510.0 True False 1676178.2909827346 1487654.1050944484 1864830.277139107 1552678.6904868064 1503173.4664013085 1479825.849718983 1564852.2492289771 1402667.5375746386 1633871.3481402067 1534791.4061225483 1.0921212382973802 0.969287486990049 1.2150382584238983 1.0116545377390718 0.9793991941868385 0.9641869532339716 1.0195862727576601 0.913914120172393 1.0645559661217878 1.0 20.549611161205057 -5.5036570568439105 24.754218030525575 0.9869849227080294 1.0854434409147822 0.3224381808886073 0.06595282802602428 775.5876745892183 998823.1275858711 0.017784219365823636 0.025907056373168674 3.1357609187047606e-06 5.5036570568439105 0.09845851820675278 RAHT(ph)PTPGIYMGRPTHSGGGGGGGGGGGGGGGGR ddPTM_KYSE-520_SHP099_60min_R1 14 RAHTPTPGIYMGRPTHSGGGGGGGGGGGGGGGGR 34 2 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RAHT(0.971)PT(0.028)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.991)PT(0.009)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.981)PT(0.019)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.992)PT(0.008)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.986)PT(0.013)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.999)PT(0.001)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(1)PTPGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.585)PT(0.131)PGIY(0.122)MGRPT(0.131)HS(0.031)GGGGGGGGGGGGGGGGR;RAHT(0.963)PT(0.037)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.972)PT(0.028)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.991)PT(0.009)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.562)PT(0.027)PGIY(0.025)MGRPT(0.298)HS(0.088)GGGGGGGGGGGGGGGGR;RAHT(0.995)PT(0.004)PGIYMGRPTHSGGGGGGGGGGGGGGGGR;RAHT(0.991)PT(0.009)PGIYMGRPTHSGGGGGGGGGGGGGGGGR 236.34 1.0054999999999999e-30 57563660000.0 2444364.0 2532866.0 3033625.0 2780735.4 2228587.0 1978493.3 1947790.7 1877275.3 3240772.0 1723153.2 True False 2308770.256201174 2411183.3154506227 3229177.321471616 3045015.656357418 2403964.117974509 1966144.7894298723 2144692.392561338 1870763.4701436495 2652329.4980139034 1707887.4032409021 1.3518281426632877 1.4117929032529546 1.8907436844746914 1.7829135870310708 1.4075659281828097 1.1512145271982794 1.2557574864077987 1.0953669818008331 1.5529885008700337 1.0 20.703781434130015 -5.996931547249066 5.192724729789447 1.2240246168282682 1.6153111355156822 0.46957321683735576 0.1991720926734645 0.16743260177624036 13.926186625444139 0.06668428363112694 0.07234891810571199 1.0070903922019512e-06 5.996931547249066 0.39128651868741393 RAKEGS(ph)SRGR ddPTM_KYSE-520_SHP099_60min_R1 1 RAKEGSSRGR 10 3 Q9UPT8 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 RAKEGS(0.993)S(0.007)RGR 61.593 0.021822 0.0 86296.0 100890.0 88741.0 64519.0 72640.0 75982.0 61433.0 61668.0 100340.0 67348.0 True False 81508.98885318886 96043.09296102262 94461.38685062018 70650.86636165532 78356.35473493664 75507.76815390817 67643.24716830242 61454.088101419424 82120.7853655595 66751.34911595116 1.2210837673348411 1.4388187539728958 1.4151232612023317 1.058418553292915 1.173854248231401 1.1311796563504144 1.0133614985189585 0.920641888370974 1.2302490729125293 1.0 16.026509375049613 -5.26520850319429 24.872370163812114 1.0759229932049827 1.3663896181580537 0.6284395386225161 0.09964536414754244 186.7020722119206 1232044.840166854 0.028015696326710946 0.04342315259320987 5.4298958159031566e-06 5.26520850319429 0.29046662495307096 RAKS(ph)PTPDGS(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 2 RAKSPTPDGSER 12 2 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 2 RAKS(0.999)PT(0.171)PDGS(0.83)ER;RAKS(0.911)PT(0.095)PDGS(0.994)ER 93.34200000000001 0.0018214000000000001 917390000.0 901350.0 965990.0 987200.0 653840.0 766170.0 761650.0 622620.0 626540.0 1207850.0 709440.0 True False 851350.3187033228 919582.390419449 1050836.4915758478 715980.7570158364 826463.2200890199 756896.2598302776 685560.5057856267 624366.6789755347 988534.8874206783 703154.9135359676 1.210757832043187 1.3077948723918158 1.494459430414114 1.0182404236007843 1.1753643531166833 1.0764288853846729 0.9749779068429408 0.8879503889630393 1.4058564740017465 1.0 19.423483041926932 -5.276461905490513 24.721641061588436 1.0721323585101572 1.3346831357118445 0.39851346543030064 0.14667155566734524 661.785079434256 1089057.2683469006 0.040744236942435286 0.06071895849731537 5.29100405665817e-06 5.276461905490513 0.2625507772016873 RALLET(ph)ASPR ddPTM_KYSE-520_SHP099_60min_R1 1 RALLETASPR 10 1 H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2;Q96BT3 H3BMP6 CENPT Centromere protein T 1 RALLET(0.977)AS(0.023)PR 93.62299999999999 0.003676 394250000.0 296690.0 327740.0 342600.0 253950.0 290660.0 286350.0 229720.0 263650.0 367290.0 317890.0 True False 280232.01426314795 311994.87845223036 364684.54417938134 278085.3316471482 313533.28837082465 284562.78343386046 252942.3394511489 262735.45968637266 300599.39462743024 315073.7419146772 0.8894172283612117 0.9902281178884129 1.1574577492977465 0.8826039579091755 0.9951108158538019 0.9031624841365575 0.8028036164297256 0.8338856106819658 0.954060445661744 1.0 18.265330000331506 -6.332421956041743 4.346759994464665 0.8802721006164997 0.9877571818343022 0.17298439699234136 0.08813764443622701 0.33677421502608923 12.335481288312282 0.03215541050163756 0.028457169561772074 4.651339545562798e-07 6.332421956041743 0.10748508121780243 RALLETAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 RALLETASPR 10 1 H3BMP6;H3BQS6;H3BN05;H3BTS2;H3BQJ0;I3L4F8;H3BUW2;H3BTR4;Q96BT3-3;Q96BT3-2;Q96BT3 H3BMP6 CENPT Centromere protein T 1 RALLET(0.001)AS(0.999)PR;RALLET(0.001)AS(0.999)PR;RALLET(0.005)AS(0.995)PR;RALLETAS(1)PR 135.63 0.00029987 1367550000.0 1576350.0 2014590.0 2371650.0 1229107.0 1374377.0 1685687.0 1269695.0 1194064.0 1576380.0 1736630.0 True False 1488906.7231241819 1917806.07243876 2524530.3537741704 1345920.959735506 1482532.6507645682 1675166.002159155 1398048.1616290542 1189922.070680633 1290149.1293059655 1721244.809277696 0.8650174078078918 1.11419715667497 1.4666887244433089 0.7819462707924207 0.8613142318707697 0.9732293704706203 0.8122308657626289 0.6913148346283016 0.7495442381885028 1.0 20.715020872985434 -5.307340124827106 24.9993778107283 0.8311177925872164 1.1451912571975689 0.4353425557583035 0.1616852386523959 384.5475583163562 209439.163602654 0.046750305515816895 0.06934219813156081 4.927877180281847e-06 5.307340124827106 0.31407346461035246 RALLSLRS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 RALLSLRSPK 10 2 Q5H909;Q9UNF1-2;Q9UNF1 Q5H909 MAGED2 Melanoma-associated antigen D2 1 RALLS(0.002)LRS(0.998)PK;RALLS(0.001)LRS(0.999)PK 67.234 0.017121 1070670000.0 1304700.0 1250620.0 1072670.0 940620.0 1024870.0 1079900.0 830600.0 922920.0 1320420.0 860930.0 True False 1232325.6901450322 1190538.3379811093 1141816.0245326832 1030016.2419922852 1105521.4382873713 1073159.9435314343 914565.1538748218 919718.6059311468 1080665.013079451 853302.8299934035 1.4441832920612239 1.3952119882109295 1.338113486089704 1.2070934324690425 1.2955792474002665 1.2576542650628855 1.0717943521667355 1.0778337696808724 1.2664495828377893 1.0 19.70269830718321 -1.0000000000000027 0.1560715042732554 0.9797763461785571 2.809047462011264 0.7472904542503409 0.0697597154374408 32.64214907718819 0.33141599462463256 0.22808997967633166 13.647475129632173 0.09999999999999938 1.0000000000000027 1.8292711158327069 RALPNNTSSS(ph)PQPK ddPTM_KYSE-520_SHP099_60min_R1 4 RALPNNTSSSPQPK 14 1 A0A087WXZ1;A0A087WT22;E7ESS1;A0A087X1Q1;J3KP33;A0A087WZU8;A0A0U1RQC9;P04637-8;P04637-9;P04637-7;P04637-5;P04637-6;P04637-2;P04637-3;P04637-4;P04637 A0A087WXZ1 TP53 Cellular tumor antigen p53 1 RALPNNTS(0.004)S(0.059)S(0.938)PQPK;RALPNNT(0.001)SS(0.001)S(0.998)PQPK;RALPNNTSS(0.025)S(0.974)PQPK;RALPNNTSS(0.019)S(0.981)PQPK 260.83 1.2693000000000002e-24 3542110000.0 4824800.0 4523900.0 4568970.0 3364310.0 3659600.0 3894440.0 3322070.0 3407870.0 5251800.0 3739930.0 True False 4557158.725999651 4306565.053487658 4863493.116810479 3684053.010883314 3947589.699724317 3870133.355390835 3657897.255878794 3396048.894372837 4298205.5071043 3706797.12982151 1.2294060253087244 1.1618021981405353 1.312047286775758 0.9938642126499944 1.0649597378733273 1.0440639775657725 0.986808052280684 0.9161679950195613 1.159547004211495 1.0 21.82174172904305 -5.2714222622378015 24.986454344894376 1.021176355975296 1.227156874061984 0.6670529092192634 0.06817057840479965 384.6359548793863 962716.4151448373 0.018645678306682966 0.028035839747176584 5.352759584222078e-06 5.2714222622378015 0.20598051808668805 RALS(ph)PLPTR ddPTM_KYSE-520_SHP099_60min_R1 4 RALSPLPTR 9 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 RALS(1)PLPTR;RALS(1)PLPTR;RALS(1)PLPTR;RALS(1)PLPTR 112.82 0.00058489 3994340000.0 632263.0 637526.0 659122.0 620018.0 523398.0 671696.0 582153.0 652408.0 769390.0 545586.0 True False 597190.111004958 606898.2940139642 701610.0587524879 678944.3243047909 564586.4448727479 667503.6961110204 641002.7065057658 650144.9489211722 629688.1707435499 540752.5324994854 1.1043685884273253 1.1223216860561662 1.29746976035319 1.2555545901311835 1.044075452153865 1.2343977253803349 1.185390114666501 1.20229663265015 1.1644664294644782 1.0 19.044608991195297 -8.057505728700628 16.641342827858175 0.9999999985275668 1.182612501475226 0.36476230744098936 0.07109095183511846 210.67356667428677 60967.69736170821 0.07006470098587704 0.01809059555589866 8.759801626596735e-09 8.057505728700628 0.18261250294765918 RALS(ph)SDSILSPAPDAR ddPTM_KYSE-520_SHP099_60min_R1 6 RALSSDSILSPAPDAR 16 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RALS(0.567)S(0.411)DS(0.021)ILSPAPDAR;RALS(0.478)S(0.146)DS(0.341)ILS(0.035)PAPDAR;RALS(0.665)S(0.158)DS(0.158)ILS(0.02)PAPDAR;RALS(0.465)S(0.117)DS(0.414)ILS(0.004)PAPDAR;RALS(0.692)S(0.185)DS(0.121)ILS(0.003)PAPDAR;RALS(0.83)S(0.169)DS(0.002)ILSPAPDAR 212.37 8.8783e-18 4549800000.0 2092660.0 2050870.0 1914580.0 1263710.0 1434150.0 1475520.0 1198390.0 1228400.0 2233900.0 1498950.0 True False 1976575.9781857159 1952343.1267813696 2037996.8902363111 1383812.618451733 1547009.445802719 1466310.7323636462 1319534.9563593173 1224138.9671107158 1828280.0720363082 1485670.469165455 1.3304269144529857 1.314115860348263 1.3717691322094556 0.9314398092795513 1.0412870672940817 0.9869690236135044 0.8881747222858505 0.8239639896715123 1.2306094184286418 1.0 20.502682722063653 -5.260463922048684 24.99852587936894 0.9769886146490052 1.3363051760416118 0.7143041198344391 0.10210323270342453 44.571072663425575 1142230.1007932106 0.02782086418434122 0.04489157161499996 5.489541567361346e-06 5.260463922048684 0.3593165613926066 RAPAVPPARPGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 RAPAVPPARPGSR 13 2 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 RAPAVPPARPGS(1)R;RAPAVPPARPGS(1)R;RAPAVPPARPGS(1)R 101.42 0.00093562 1436450000.0 703700.0 517670.0 580110.0 525442.0 500643.0 593310.0 493729.0 577050.0 625990.0 564710.0 True False 664664.3582088281 492800.3561614888 617504.8188088178 575379.8497001022 540040.7558309869 589606.9322128303 543639.9456506887 575048.348234482 512325.99592372536 559707.108737732 1.1875217374097655 0.8804611348833261 1.1032642058119162 1.0280016828760954 0.9648631353796858 1.0534204819062047 0.9712936233322488 1.0274094062005894 0.9153465945414523 1.0 19.09431254569288 -4.234491854594512 24.01232979316991 0.9993885462488658 1.1875221804183218 0.46525063088086427 0.062049955364125664 4811.531760595216 4287335.641460585 0.014475524046470008 1.137514076915823 5.8278470510614025e-05 4.234491854594512 0.18813363416945605 RAPFDLFENK ddPTM_KYSE-520_SHP099_60min_R1 4 RAPFDLFENK 10 1 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ;;; 202.03 2.5907e-06 16037100000.0 8000690.0 6263730.0 4211360.0 3665010.0 6461800.0 5566290.0 4260060.0 4690240.0 4192140.0 5049370.0 False True 7556875.77671989 5962811.008749594 4482831.00401424 4013331.4484745604 6970306.897387301 5531548.719399568 4690708.438979021 4673970.652150244 3430953.0512495157 5004636.510150417 1.509974952505145 1.1914573609203796 0.8957355833779637 0.8019226651795213 1.3927698611577697 1.1052848110308244 0.9372725530546153 0.9339280970097399 0.685554893805144 1.0 22.254833858356097 -4.41468689252304 2.857997136565893 0.9805185276121017 1.5283623260030443 0.4666068365307462 0.17871088902142038 0.30330817069726 4.044976346167046 0.04931232947446781 0.31905595820674454 3.848691560076494e-05 4.41468689252304 0.5478437983909427 RAPFDLFENKK ddPTM_KYSE-520_SHP099_60min_R1 5 RAPFDLFENKK 11 2 P08238;Q58FF7 P08238 HSP90AB1;HSP90AB3P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3 0 ;;;; 151.55 3.3693000000000004e-05 9260430000.0 7391340.0 6001120.0 4235904.0 3551802.0 6306860.0 5258640.0 4053416.0 4067992.0 4381423.0 3854167.0 False True 6981327.635929002 5712817.187335238 4508957.14952603 3889364.1941917893 6803174.000875323 5225818.877166531 4463174.846807931 4053881.0852284725 3585867.029885643 3820022.078876557 1.8275621165996414 1.4954932378336776 1.1803484525545163 1.0181522812914279 1.7809253089123744 1.368007506046512 1.1683636258250425 1.0612192813348063 0.9387032210400792 1.0 21.865149546065215 -1.000000000000049 0.17752007393816543 0.9253953480249529 4.051170013076375 0.4549185568813092 0.22617530972178554 62.443197893202715 0.6959972818358451 0.5851096475301721 52.46913690288918 0.0999999999999887 1.000000000000049 3.1257746650514218 RAPFDLFENR ddPTM_KYSE-520_SHP099_60min_R1 5 RAPFDLFENR 10 1 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;;;; 196.11 5.270299999999999e-06 25621080000.0 15636400.0 13335103.0 8928300.0 7392595.0 14083885.0 12710174.0 9270978.0 9225435.0 9223357.0 10240978.0 False True 14769017.721609402 12694464.635482334 9503832.503785083 8095185.0061352635 15192206.623156022 12630845.089466346 10208178.932265928 9193434.11921771 7548627.870708888 10150250.902280316 1.4550396698362849 1.2506552554903292 0.9363150325328401 0.7975354583911449 1.4967321270593419 1.2443874748582568 1.0057070539973154 0.9057346668299943 0.7436887958122339 1.0 23.275012053789645 -7.008279738720168 3.1705455903162982 0.8723590437019363 1.1818392591220472 0.3197061485614243 0.20639164610948033 0.34562813203097154 7.13022155657465 0.11098699788902883 0.06436942062382162 9.811157809848766e-08 7.008279738720168 0.30948021542011095 RAPFDLFENRK ddPTM_KYSE-520_SHP099_60min_R1 4 RAPFDLFENRK 11 2 P07900;P07900-2 P07900 HSP90AA1 Heat shock protein HSP 90-alpha 0 ;;; 164.81 1.158e-05 8604760000.0 8914490.0 7692460.0 5899380.0 4154420.0 7965700.0 6751540.0 4614340.0 4823730.0 6046030.0 4577920.0 False True 8419985.469104761 7322902.674982142 6279663.4741417365 4549254.827728076 8592555.271366805 6709401.134503394 5080802.518818613 4806997.606497047 4948223.360013285 4537363.19036787 1.8557001315167156 1.6139115093381873 1.3839896015977968 1.00262082554587 1.8937331905912864 1.4787004815365958 1.119769854351616 1.0594253545102075 1.0905504259649323 1.0 22.113422713247243 -1.0000000000002358 0.1505008327070019 0.8655065872705026 4.164911368231517 0.4733870180566102 0.23921869153082145 67.79608132315687 0.6697630054821471 0.9128125970440796 48.88149411034178 0.0999999999999457 1.0000000000002358 3.299404780961015 RAPQASGPS(ph)TPGYR ddPTM_KYSE-520_SHP099_60min_R1 1 RAPQASGPSTPGYR 14 1 Q2QGD7-2;Q2QGD7 Q2QGD7-2 ZXDC Zinc finger protein ZXDC 1 RAPQASGPS(0.866)T(0.134)PGYR 131.48 0.00033985 0.0 99494.0 78948.0 86317.0 85548.0 94488.0 108560.0 66711.0 78210.0 111800.0 94205.0 True False 93974.86948362831 75155.21957663604 91881.1319320832 93678.45619905589 101923.6680368214 107882.43677171266 73454.79891661838 77938.70776435119 91499.93824865 93370.41699038103 1.0064737045493708 0.8049146828205608 0.9840497118219869 1.0032991092746923 1.0916055783206102 1.1554241723352983 0.7867031259396181 0.834725925797037 0.9799671159022056 1.0 16.510677905697467 -10.296206310053767 5.004888523987977 1.0000123467747755 0.9588885790174606 0.01025636008576336 0.11416051132158471 1.6935767359539995e-05 2.381420273557487e-06 0.11902547734326661 0.02885925176426917 5.055844288563821e-11 10.296206310053767 -0.041123767757314855 RAPS(ph)PGAYK ddPTM_KYSE-520_SHP099_60min_R1 8 RAPSPGAYK 9 1 P54259 P54259 ATN1 Atrophin-1 1 RAPS(1)PGAYK;RAPS(1)PGAYK;RAPS(1)PGAYK;RAPS(1)PGAYK;RAPS(1)PGAYK;RAPS(1)PGAYK;RAPS(1)PGAYK;RAPS(1)PGAYK 132.56 0.00046999 19489630000.0 18845730.0 17142710.0 16164800.0 14838880.0 15056700.0 16525840.0 15118290.0 15668930.0 18660140.0 16005990.0 True False 17800319.78886863 16319148.479867708 17206808.87259448 16249162.693728065 16241576.629095832 16422696.102610923 16646594.29349166 15614578.138985755 15271928.959849421 15864189.381071797 1.1220440806201486 1.0286783703766635 1.0846320892465275 1.0242668127194445 1.023788624742107 1.0352055001439597 1.0493189342125089 0.9842657424158172 0.9626668336467903 1.0 23.919270469375952 -1.000000002852201 0.21759936792588994 0.9813387847629254 1.607685788068634 0.6131822089336341 0.027417603866357484 36.50827668130959 0.46355789315060103 0.044513763257176875 8.00528664948225 0.09999999934325647 1.000000002852201 0.6263470033057086 RAPS(ph)PLPK ddPTM_KYSE-520_SHP099_60min_R1 10 RAPSPLPK 8 1 Q9BSL1 Q9BSL1 UBAC1 Ubiquitin-associated domain-containing protein 1 1 RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK;RAPS(1)PLPK 91.12299999999999 0.0027575 63244910000.0 32030210.0 29187150.0 25695810.0 22237960.0 23385970.0 27790350.0 24090520.0 28018390.0 32896060.0 27237400.0 True False 30253430.400659386 27784955.503194645 27352203.027349684 24351449.03231354 25226312.7910323 27616900.117343087 26525824.862418104 27921200.74463139 26922964.74618861 26996097.826376528 1.1206593854871973 1.0292211741819726 1.0131909879443846 0.9020358864058111 0.9344429314663744 1.0229960009390693 0.9825799651867114 1.0342680236308446 0.9972909758788745 1.0 24.68624755099184 -4.334932122685843 1.8895856924754593 0.9831363886836317 1.1495567067355386 0.5444665491742776 0.03779655880085909 0.5699340972734037 2.408623645560113 0.011321392919695448 0.15848137339928692 4.624532940988503e-05 4.334932122685843 0.16642031805190682 RAPS(ph)PVVSPTEMNK ddPTM_KYSE-520_SHP099_60min_R1 1 RAPSPVVSPTEMNK 14 1 H7C1X5;E7EUA2;A6NHU9;A0A0A0MSQ6;A0A590UJ45;Q9UPX8-4;Q9UPX8;Q9UPX8-3 H7C1X5 SHANK2 SH3 and multiple ankyrin repeat domains protein 2 1 RAPS(1)PVVSPTEMNK 107.57 0.00027153 596390000.0 395090.0 451940.0 263520.0 267960.0 266790.0 346880.0 273230.0 288190.0 370380.0 364990.0 True False 373173.57010761136 430228.1240242301 280506.92084690765 293426.8378348881 287784.8551725466 344714.9932513974 300850.75486782775 287190.3361540513 303128.3285199911 361756.4725579228 1.0315601749125871 1.1892755393764072 0.7754026316750812 0.8111170361655544 0.7955209567852798 0.9528923997239694 0.8316388998946159 0.7938775334781817 0.8379347752277067 1.0 18.464659304168737 -4.763008851953677 24.99999999912164 0.8421499716205344 1.1104178941442584 0.6445690466938121 0.07724549424116378 21.25822784351054 338646.1140760517 0.019190063982758052 0.0436728830645794 1.7258027156708634e-05 4.763008851953677 0.268267922523724 RAPS(ph)SPVAK ddPTM_KYSE-520_SHP099_60min_R1 4 RAPSSPVAK 9 1 Q9GZR2;A0A0C4DG31;Q9GZR2-2 Q9GZR2 REXO4 RNA exonuclease 4 1 RAPS(0.5)S(0.5)PVAK;RAPS(0.7)S(0.3)PVAK;RAPS(0.862)S(0.138)PVAK;RAPS(0.592)S(0.408)PVAK 103.21 0.0021026 8151300000.0 8755400.0 7086100.0 6695600.0 7552600.0 7631200.0 7544300.0 7976700.0 8481200.0 8174100.0 7775800.0 True False 8269720.508542806 6745673.1195470495 7127209.089338778 8270396.833228003 8231732.024411463 7497213.2252840055 8783062.681089915 8451780.696726952 6689889.4922924 7706912.461480864 1.0730263967412184 0.875275689617848 0.9247813732101612 1.0731141523357677 1.0680972523761814 0.9727907593027771 1.1396344158555904 1.0966493701555504 0.8680375605313356 1.0 22.877721573609 -5.25768666176687 24.962340861274814 1.038839264049377 0.9494526046485128 0.12976062489769302 0.08482803413711514 542.1141524472462 3606022.1801667674 0.022975644091430367 0.037925156940487266 5.524759002228208e-06 5.25768666176687 -0.08938665940086432 RAPS(ph)SPVAKPGPVK ddPTM_KYSE-520_SHP099_60min_R1 3 RAPSSPVAKPGPVK 14 2 Q9GZR2;A0A0C4DG31;Q9GZR2-2 Q9GZR2 REXO4 RNA exonuclease 4 1 RAPS(0.5)S(0.5)PVAKPGPVK;RAPS(0.5)S(0.5)PVAKPGPVK;RAPS(0.5)S(0.5)PVAKPGPVK 85.473 0.0064744 11791900000.0 7305900.0 6194100.0 5977400.0 5936500.0 5547300.0 5595500.0 5342100.0 6359200.0 6758600.0 5198000.0 True False 6900627.163049425 5896526.138466355 6362712.768178147 6500703.17512619 5983840.95018054 5560576.4089546595 5882131.601871758 6337141.419448444 5531408.610441194 5151949.76398281 1.3394205066383968 1.144523221031553 1.2350106386245767 1.261794752070855 1.1614711370078696 1.0793149513662867 1.14172922317559 1.230047207321641 1.0736534445873627 1.0 22.296687095306552 -1.0000000087493386 0.03233161227800113 0.3589914475165458 2.3796211912049903 0.5797017570350267 0.06244618873756791 928.1267074035055 2.302730243599806 44.30690741843428 114.94682516416334 0.09999999798539036 1.0000000087493386 2.0206297436884446 RAPS(ph)VANVGSHCDLSLK ddPTM_KYSE-520_SHP099_60min_R1 7 RAPSVANVGSHCDLSLK 17 1 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 RAPS(1)VANVGSHCDLSLK;RAPS(0.978)VANVGS(0.022)HCDLSLK;RAPS(1)VANVGSHCDLSLK;RAPS(0.988)VANVGS(0.012)HCDLSLK;RAPS(1)VANVGSHCDLSLK;RAPS(1)VANVGSHCDLSLK;RAPS(1)VANVGSHCDLSLK 257.96 1.2685e-29 36960400000.0 7389850.0 5935690.0 5577040.0 6989230.0 6685210.0 6473240.0 6604150.0 8214880.0 7673180.0 7496810.0 True False 6979920.28919925 5650530.542747664 5936544.921979508 7653484.317811373 7211297.993358298 6432838.108033535 7271761.932292799 8186384.498647411 6279923.937126803 7430394.09582993 0.9393741703574654 0.760461756115849 0.7989542473004498 1.0300240093734254 0.9705135286707616 0.8657465573251032 0.9786509084859768 1.1017429752806458 0.8451670067744063 1.0 22.82500730027936 -5.253402589605295 24.899053555512673 0.9705078725493936 0.8256832190998734 0.3731142922649161 0.08141259110542516 588.9788756216408 1824731.1828264017 0.021945546584637633 0.03717427352116887 5.579527345191975e-06 5.253402589605295 -0.14482465344952022 RAPS(ph)VANVGSHCDLSLKIPEISIQDMTAQVTSPSGK ddPTM_KYSE-520_SHP099_60min_R1 1 RAPSVANVGSHCDLSLKIPEISIQDMTAQVTSPSGK 36 2 Q60FE5;P21333-2;P21333 Q60FE5 FLNA Filamin-A 1 RAPS(0.525)VANVGS(0.464)HCDLS(0.011)LKIPEISIQDMTAQVTSPSGK 83.531 0.0018891 623710000.0 181290.0 217570.0 167600.0 171550.0 159040.0 166320.0 172700.0 209570.0 225650.0 134580.0 True False 171233.48230734465 207117.61062077177 178403.76416948152 187854.06042161168 171555.54318618306 165281.9351867287 190158.2013895757 208843.05058400554 184677.6481735947 133387.7259016555 1.2837274280662987 1.5527486447551857 1.3374826129130921 1.4083309326385343 1.286141899687742 1.2391090264826035 1.425604943064822 1.5656841675071511 1.3845175553090574 1.0 17.025266392867053 -11.152742771456154 2.3305193304123195 0.11433889851095842 1.3901512928752158 0.558282954240863 0.10324758594141947 5260460.423688457 1235153.6837377062 24624133.015047293 0.026779568714722254 7.03488866363547e-12 11.152742771456154 1.2758123943642574 RAPS(ph)WR ddPTM_KYSE-520_SHP099_60min_R1 7 RAPSWR 6 1 A0A2R8Y7R9;Q13136-2;Q13136;O75335-1;B1APN9;O75335;O75335-2;M0QZB5 A0A2R8Y7R9 PPFIA1;PPFIA4 Liprin-alpha-1;Liprin-alpha-4 1 RAPS(1)WR;RAPS(1)WR;RAPS(1)WR;RAPS(1)WR;RAPS(1)WR;RAPS(1)WR;RAPS(1)WR 57.59 0.043679 29354600000.0 9025800.0 8328790.0 8163820.0 7321540.0 8324130.0 7483780.0 7210500.0 7493590.0 8636460.0 7959820.0 True False 8525120.881513769 7928662.426631339 8690072.89977385 8017376.960298741 8979191.673179084 7437070.953052768 7939407.707698542 7467596.485307047 7068296.571439498 7889302.187446256 1.0805925136293106 1.0049890647169928 1.1015008290089088 1.0162339798640598 1.1381477676779956 0.942677917051638 1.0063510712432864 0.9465471480088261 0.8959343175733372 1.0 22.91146626813929 -6.283516234467101 24.84636555130373 0.9579643386051612 1.0637286891491378 0.5862066228693119 0.046125309206512886 543.8670879848823 612092.2036810082 0.015639780179954786 0.013805505527629746 5.205755486772956e-07 6.283516234467101 0.10576435054397659 RAPSS(ph)PVAK ddPTM_KYSE-520_SHP099_60min_R1 4 RAPSSPVAK 9 1 Q9GZR2;A0A0C4DG31;Q9GZR2-2 Q9GZR2 REXO4 RNA exonuclease 4 1 RAPS(0.008)S(0.992)PVAK;RAPS(0.005)S(0.995)PVAK;RAPS(0.217)S(0.783)PVAK;RAPS(0.256)S(0.744)PVAK 92.781 0.0039091 6017600000.0 8602400.0 6942200.0 6931200.0 7416900.0 7745000.0 7842800.0 8225800.0 8782500.0 8576400.0 8075300.0 True False 8125207.723540752 6608686.291545354 7377996.242312109 8121799.946027703 8354487.436978039 7793850.176061051 9057344.140071638 8752035.55735091 7019141.953450111 8003759.124488342 1.0151739447881216 0.82569779884122 0.921816377474224 1.014748172665292 1.0438204482462006 0.9737737049350907 1.1316362723060647 1.0934906237461766 0.8769806592472665 1.0 22.932246318884758 -5.266724653892688 4.4093790351293665 1.0277421719540918 0.9097939270769282 0.24685279192861387 0.07747344671792943 0.24355587713333404 12.439635847422597 0.021615480927250616 0.035548613943909055 5.410972741323661e-06 5.266724653892688 -0.1179482448771636 RAQS(ph)IER ddPTM_KYSE-520_SHP099_60min_R1 1 RAQSIER 7 1 O14681-3;O14681;E9PLB8;E9PL33;E9PM05;E9PS58;E9PK61 O14681-3 EI24 Etoposide-induced protein 2.4 homolog 1 RAQS(1)IER 77.14 0.012334999999999999 448830000.0 135060.0 132360.0 121580.0 162120.0 160930.0 137100.0 138840.0 177340.0 200540.0 132060.0 True False 127567.95256456491 126001.22692358965 129417.24133487802 177527.83605684488 173594.27543355394 136244.3080453373 152875.302147821 176724.84893146702 164126.99120200606 130890.05114112515 0.9746191666394999 0.9626493826313477 0.9887477329758306 1.3563126800633232 1.3262602766224398 1.0409065231278671 1.167967319250196 1.350177858368494 1.2539302244220607 1.0 16.997995917672338 -5.182026063670502 7.945463757903185 1.2236421158785924 0.9721763066665484 0.47356920370225974 0.11482941416897406 0.27097929584251773 24.550741831508322 0.03177366814500992 0.055263374090851546 6.576183699812013e-06 5.182026063670502 -0.251465809212044 RAQS(ph)LKAPSIATIK ddPTM_KYSE-520_SHP099_60min_R1 2 RAQSLKAPSIATIK 14 2 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 RAQS(1)LKAPSIATIK;RAQS(0.916)LKAPS(0.084)IATIK 154.75 9.7237e-07 2849100000.0 1214950.0 1226190.0 1331550.0 949360.0 1048960.0 1108580.0 852560.0 898580.0 1439230.0 924960.0 True False 1147554.3015572191 1167281.9918512856 1417383.8435553284 1039586.8889645088 1131507.1842340194 1101660.9410131276 938745.0849837683 895463.0357101482 1177902.11203582 916765.5740079917 1.2517423582347733 1.2732611530645348 1.5460701009514268 1.1339724335628756 1.2342383007328717 1.201682275433615 1.0239750614540255 0.9767633745181864 1.284845488783103 1.0 19.806193344076505 -6.042551486902972 1.1444307586645488 1.0756761203775065 1.3334033988463447 0.41221163288721174 0.12381774838434961 0.47469136243587046 1.3086384266671558 0.05876764312978256 0.06513940974987546 9.066684699674319e-07 6.042551486902972 0.25772727846883825 RAS(ph)AAAAAGGGATGHPGGGQGAENPAGLK ddPTM_KYSE-520_SHP099_60min_R1 8 RASAAAAAGGGATGHPGGGQGAENPAGLK 29 1 Q07617 Q07617 SPAG1 Sperm-associated antigen 1 1 RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK;RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK;RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK;RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK;RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK;RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK;RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK;RAS(1)AAAAAGGGATGHPGGGQGAENPAGLK 291.21 1.9818e-52 21290880000.0 5469360.0 5651530.0 4581490.0 4532970.0 3840420.0 4437670.0 4177370.0 4844940.0 5629890.0 5504630.0 True False 5165963.697901143 5380022.015680523 4876820.176043182 4963782.105912869 4142639.204999253 4409972.855459891 4599659.326802384 4828134.033957499 4607643.893977573 5455863.26073733 0.9468645842130199 0.9860991301591826 0.8938677424595327 0.9098069120673016 0.7593004089401241 0.8082997400605505 0.8430671933997052 0.8849441056748558 0.8445306771407016 1.0 22.379376056148093 -5.10325344319375 1.9621413040445104 0.8497104561889431 0.9652140123617851 0.28185817165977944 0.06167946892117952 0.37874678013405966 2.831876969402871 0.01802101467312908 0.042817625964975986 7.883998932548544e-06 5.10325344319375 0.11550355617284191 RAS(ph)AILPGVLGSETLSNEVFQES(ph)EEEKQPEVPSSLAK ddPTM_KYSE-520_SHP099_60min_R1 3 RASAILPGVLGSETLSNEVFQESEEEKQPEVPSSLAK 37 2 Q9BZQ8 Q9BZQ8 FAM129A Protein Niban 2 RAS(0.975)AILPGVLGS(0.027)ET(0.015)LS(0.015)NEVFQES(0.958)EEEKQPEVPS(0.007)S(0.002)LAK;RAS(0.986)AILPGVLGS(0.006)ET(0.006)LS(0.007)NEVFQES(0.994)EEEKQPEVPSSLAK;RAS(1)AILPGVLGSETLSNEVFQES(1)EEEKQPEVPSSLAK 331.27 6.0702e-82 768588000.0 305017.0 329225.0 290531.0 279140.0 298167.0 305444.0 266089.0 316439.0 399668.0 314704.0 True False 288097.09897368494 313408.53682320024 309259.09312603605 305669.38167349866 321631.0465618374 303537.6106973014 292987.8728983839 315341.3469664175 327098.36601038894 311915.9673960073 0.9236369057308245 1.004785165182961 0.9914820831644117 0.9799734980717482 1.0311464630904765 0.973139058033317 0.9393166862997032 1.0109817384438717 1.0486746438187504 1.0 18.250797882530094 -4.256953011322385 24.332994699927298 0.9957667988041412 0.9236368629839279 0.3701180613428574 0.028893119340418157 373.82420216306053 2027424.4807524777 0.007476839197047146 0.05714595200884049 5.5340998240692224e-05 4.256953011322385 -0.07212993582021332 RAS(ph)AILPGVLGSETLSNEVFQESEEEK ddPTM_KYSE-520_SHP099_60min_R1 2 RASAILPGVLGSETLSNEVFQESEEEK 27 1 Q9BZQ8 Q9BZQ8 FAM129A Protein Niban 1 RAS(1)AILPGVLGSETLSNEVFQESEEEK;RAS(0.999)AILPGVLGSETLSNEVFQESEEEK 143.23 1.1787e-06 172807000.0 142074.0 147689.0 102551.0 107002.0 110436.0 148020.0 117158.0 161357.0 156908.0 174107.0 True False 134192.8720025025 140593.79875429152 109161.60154740138 117171.43790867562 119126.6849051138 147096.15227476895 129001.473991893 160797.29022800704 128417.462528794 172564.54743319645 0.7776387096802229 0.8147316516952504 0.6325841731173679 0.6790006386105192 0.6903311640603953 0.8524123550447876 0.7475549057481364 0.9318095322578076 0.7441705984162664 1.0 17.39677657455082 -8.09081558459545 0.45243793630300655 1.0044519849391094 0.718582524928787 0.4902886628882539 0.0781161731171095 1.1004369365721107 0.5526661055484803 0.11019430017044349 0.052327372673572674 8.11305491124223e-09 8.09081558459545 -0.2858694600103223 RAS(ph)AILPGVLGSETLSNEVFQESEEEKQPEVPSSLAK ddPTM_KYSE-520_SHP099_60min_R1 7 RASAILPGVLGSETLSNEVFQESEEEKQPEVPSSLAK 37 2 Q9BZQ8 Q9BZQ8 FAM129A Protein Niban 1 RAS(0.973)AILPGVLGS(0.016)ET(0.007)LS(0.004)NEVFQESEEEKQPEVPSSLAK;RAS(0.999)AILPGVLGS(0.001)ETLSNEVFQESEEEKQPEVPSSLAK;RAS(1)AILPGVLGSETLSNEVFQESEEEKQPEVPSSLAK;RAS(1)AILPGVLGSETLSNEVFQESEEEKQPEVPSSLAK;RAS(1)AILPGVLGSETLSNEVFQESEEEKQPEVPSSLAK;RAS(1)AILPGVLGSETLSNEVFQESEEEKQPEVPSSLAK;RAS(1)AILPGVLGSETLSNEVFQESEEEKQPEVPSSLAK 421.21 2.5382999999999994e-133 17207010000.0 2821174.0 3010745.0 2286071.0 2162215.0 1840913.0 2592879.0 2164766.0 2854886.0 3274795.0 2827019.0 True False 2664677.8543490614 2866104.2909796243 2433434.7945029256 2367711.263506354 1985782.3797378384 2576695.880381373 2383601.6733602025 2844983.0668014027 2680174.7788639334 2801973.8110475005 0.951000271252674 1.0228876086133543 0.8684716412796168 0.8450154866441095 0.7087084011664856 0.9196002725728873 0.8506866352434278 1.0153496280316137 0.9565309883685054 1.0 21.418012040850055 -7.262322180857339 24.99104602445535 0.9894552349017384 0.879376705292385 0.29467232244184893 0.077755626836245 113.68690039172466 3218197.647100522 0.04375039308632739 0.022910761498213895 5.466103102218749e-08 7.262322180857339 -0.11007852960935338 RAS(ph)APHGPLDMAPFAR ddPTM_KYSE-520_SHP099_60min_R1 1 RASAPHGPLDMAPFAR 16 1 Q8N4B1-2;Q8N4B1;Q8N4B1-4 Q8N4B1-2 FAM109A Sesquipedalian-1 1 RAS(1)APHGPLDMAPFAR 67.76 0.015392 415800000.0 139840.0 120580.0 120220.0 117590.0 102380.0 114390.0 79724.0 86178.0 95173.0 100730.0 True False 132082.79643587105 114787.15580572997 127969.57355880109 128765.71824527746 110436.72353748378 113676.04957918389 87783.27995125957 85879.06863209643 77891.98231608917 99837.6105667541 1.3229763381361872 1.1497386120732547 1.2817772063288435 1.289751602770794 1.1061635280588253 1.13860947726886 0.8792606258596836 0.8601875399920091 0.7801867640252519 1.0 16.607295785857527 -6.567674666004396 1.4886489010416093 0.8540980697563335 1.245200064078976 0.8142979953834231 0.07918180064136116 0.15460902637952256 0.6968329323203273 0.03970316221877628 0.02802987656258707 2.705984683091205e-07 6.567674666004396 0.3911019943226425 RAS(ph)DCGLAPHRPR ddPTM_KYSE-520_SHP099_60min_R1 8 RASDCGLAPHRPR 13 2 Q6ZV89;E5RGJ3;E5RGV2;E5RJW5;J3KQT6 Q6ZV89 SH2D5 SH2 domain-containing protein 5 1 RAS(1)DCGLAPHRPR;RAS(1)DCGLAPHRPR;RAS(1)DCGLAPHRPR;RAS(1)DCGLAPHRPR;RAS(1)DCGLAPHRPR;RAS(1)DCGLAPHRPR;RAS(1)DCGLAPHRPR;RAS(1)DCGLAPHRPR 137.61 8.5067e-06 99200400000.0 1318160.0 1043384.0 1020417.0 1127175.0 988584.0 964512.0 988951.0 1027673.0 1101887.0 904446.0 True False 1245039.037113187 993258.2664886867 1086194.7125449257 1234301.3731024803 1066379.9365264692 958492.12284044 1088923.818311653 1024108.2422236805 901812.0971108262 896433.3120883408 1.3888808239541328 1.1080113301175538 1.2116849049423597 1.376902616689956 1.1895808892266833 1.0692285861259734 1.2147293096180065 1.1424254636833016 1.0060002065406906 1.0 19.773836735837197 -7.233152437346019 0.5188978932624007 0.9884660436773588 1.2628514612642496 0.49384589998643247 0.09149401687789666 0.8119209618028249 0.49531549315357887 0.09487662005545724 0.06284654175934289 5.845848588671493e-08 7.233152437346019 0.27438541758689083 RAS(ph)DDGKLTDPSK ddPTM_KYSE-520_SHP099_60min_R1 7 RASDDGKLTDPSK 13 2 P04049;P04049-2;A0A0B4J1W9 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 RAS(1)DDGKLTDPSK;RAS(1)DDGKLTDPSK;RAS(1)DDGKLTDPSK;RAS(1)DDGKLTDPSK;RAS(0.996)DDGKLT(0.004)DPSK;RAS(1)DDGKLTDPSK;RAS(0.984)DDGKLT(0.013)DPS(0.003)K 160.55 6.917699999999999e-07 28115070000.0 30243300.0 29053840.0 29062200.0 26658460.0 28359160.0 31835290.0 30003210.0 31865410.0 45455890.0 32358080.0 True False 28565643.860476162 27658049.915697087 30935595.913164124 29192072.023241743 30590864.550451912 31636594.14640879 33036227.269911643 31754876.33015257 37202246.225737266 32071412.585405324 0.8906886712397406 0.8623895140896719 0.9645847631682406 0.9102209622199842 0.9538358957214388 0.9864421799994426 1.030083323643355 0.9901302677451508 1.1599815295527962 1.0 24.93478456289531 -6.307803623308694 0.7335214348832505 1.0623060577972228 0.8907834720506889 0.6330602245122131 0.04799601082692696 0.4319266574019763 0.5048478385107154 0.03365272070022936 0.03186866845658208 4.922620734962497e-07 6.307803623308694 -0.1715225857465339 RAS(ph)DGGANIQLHAQQLLK ddPTM_KYSE-520_SHP099_60min_R1 8 RASDGGANIQLHAQQLLK 18 1 H0Y4E8;Q9Y2K2-8;Q9Y2K2-7;Q9Y2K2;H7C3X8 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 RAS(1)DGGANIQLHAQQLLK;RAS(1)DGGANIQLHAQQLLK;RAS(1)DGGANIQLHAQQLLK;RAS(1)DGGANIQLHAQQLLK;RAS(1)DGGANIQLHAQQLLK;RAS(1)DGGANIQLHAQQLLK;RAS(1)DGGANIQLHAQQLLK;RAS(1)DGGANIQLHAQQLLK 244.95 6.2771e-24 8824390000.0 7922340.0 7751390.0 8066140.0 6521630.0 7266090.0 6711370.0 6290990.0 7493540.0 8992610.0 6875870.0 True False 7482872.007406745 7379001.589326407 8586096.290680317 7141443.754400446 7837889.9446032 6669481.8503737 6926944.6633457355 7467546.658745379 7359778.709250385 6814955.141145916 1.098007522049297 1.0827659810664063 1.259890360662974 1.0479076687215922 1.1501014727567642 0.9786538153576526 1.0164329067294475 1.0957587400186073 1.0799452904414655 1.0 22.70027272997031 -6.245387107113095 24.964522643718897 1.0390352415774444 1.1281435046667034 0.36537021790137125 0.061494875172569456 975.0405359232999 1516386.561485276 0.020521837108531994 0.02046238732643641 5.683461113613931e-07 6.245387107113095 0.08910826308925901 RAS(ph)DPVRRPDALSLPR ddPTM_KYSE-520_SHP099_60min_R1 2 RASDPVRRPDALSLPR 16 3 P10070;P10070-3;P10070-1;P10070-4;P10070-2 P10070;P10070-4 GLI2 Zinc finger protein GLI2 1 RAS(1)DPVRRPDALSLPR;RAS(1)DPVRRPDALSLPR 108.45 0.00043629 1628200000.0 758810.0 797870.0 874870.0 509660.0 433160.0 536190.0 463960.0 485690.0 833800.0 477630.0 True False 716717.2966497678 759539.1275727148 931265.520041493 558097.9331651338 467247.22765673464 532843.4393204184 510861.6046132459 484005.2547508976 682402.9383875164 473398.5697905171 1.513982809383901 1.6044389992745802 1.9671912411006776 1.1789176579306035 0.9870059976385132 1.1255704459694633 1.079136349818941 1.0224054013620574 1.4414976764494356 1.0 18.852695821913553 -5.3721164807342765 6.45492401612868 1.108219372014544 1.683703556248138 0.7265969115472792 0.16216782163948923 0.12038626428397736 6.115658786573108 0.04522029174304791 0.06738758684872069 4.2450569336196e-06 5.3721164807342765 0.575484184233594 RAS(ph)DSLSAR ddPTM_KYSE-520_SHP099_60min_R1 1 RASDSLSAR 9 1 H7C113;Q8NB49 H7C113 ATP11C Phospholipid-transporting ATPase IG 1 RAS(0.629)DS(0.22)LS(0.151)AR 66.492 0.028691 0.0 397670.0 385720.0 275240.0 230510.0 605890.0 686990.0 285610.0 241530.0 321270.0 1120100.0 True False 375610.45236450835 367189.4322224766 292982.4107995706 252417.60109464126 653570.0959574719 682702.2405839993 314482.2460849844 240692.18880352564 262935.4665576366 1110176.7854246143 0.3383339097843295 0.3307486132328339 0.2639060865315359 0.22736703235791222 0.5887081269741179 0.6149491230109654 0.28327222313940115 0.21680527999103044 0.23684107793433143 1.0 20.082358000086344 -10.950204033593264 2.6442862479388274 1.4814801359639935 0.34789855519509205 0.6763578200042027 0.13600338967486256 25813800.08886351 13895314.3488934 76445795.40985519 0.03790194314264669 1.1214914485516508e-11 10.950204033593264 -1.1335815807689014 RAS(ph)DTSLTQGIVAFR ddPTM_KYSE-520_SHP099_60min_R1 7 RASDTSLTQGIVAFR 15 1 Q9H0K1 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 1 RAS(0.994)DT(0.006)SLTQGIVAFR;RAS(0.998)DT(0.002)SLTQGIVAFR;RAS(0.724)DT(0.217)S(0.04)LT(0.019)QGIVAFR;RAS(0.999)DT(0.001)SLTQGIVAFR;RAS(0.998)DT(0.002)SLTQGIVAFR;RAS(0.658)DT(0.342)SLTQGIVAFR;RAS(0.999)DT(0.001)SLTQGIVAFR 240.89 5.952000000000001e-19 11736200000.0 2816840.0 2631500.0 2696700.0 2119910.0 2494900.0 2366910.0 2217710.0 2347930.0 2659660.0 2443170.0 True False 2660584.2699686727 2505078.790037969 2870533.5968725574 2321385.609025819 2691234.435960818 2352137.2367293127 2441897.769563845 2339785.5788409836 2176732.788572494 2421525.4145575003 1.0987224226407126 1.0345044388046354 1.1854236918661896 0.9586459820203951 1.1113798020792622 0.9713452613748977 1.008413025477194 0.9662444857175065 0.8989097432083988 1.0 21.20748471381385 -6.36418229046113 0.8750407398842477 0.9504463559989782 1.0882698629627812 0.42724483987750983 0.06158949696765567 0.5540811812730588 0.9014163523007028 0.0386387894100084 0.0324421324937559 4.32332326078071e-07 6.36418229046113 0.13782350696380297 RAS(ph)DTSLTQGLK ddPTM_KYSE-520_SHP099_60min_R1 2 RASDTSLTQGLK 12 1 A0A0B4J2F2;P57059 A0A0B4J2F2 LOC102724428;SIK1 Serine/threonine-protein kinase SIK1 1 RAS(0.999)DT(0.001)SLTQGLK;RAS(0.999)DT(0.001)SLTQGLK 211.49 8.1238e-11 1235390000.0 1095150.0 972220.0 924180.0 760370.0 943780.0 827290.0 828320.0 829030.0 1238520.0 972810.0 True False 1034399.8463725998 925513.0918680278 983754.1215402825 832635.3361864227 1018050.1166263581 822126.5762423556 912054.6692241653 826154.2884270562 1013635.9885484631 964191.6602347285 1.0728155915814284 0.9598849793439569 1.020288975846142 0.8635579112805447 1.0558586623519624 0.8526588749400843 0.9459267351494508 0.8568361690931161 1.051280601516194 1.0 19.878960425649886 -1.0000218074677591 0.8177509817766567 0.9425058969575916 36.88113388046262 0.17743382673550923 0.07397177290934488 872.4724294313299 2.7862558097159416 0.024121551558030013 58183.69603439508 0.09999497877105011 1.0000218074677591 35.93862798350503 RAS(ph)EDT(ph)T(ph)SGSPPKKSSAGPK ddPTM_KYSE-520_SHP099_60min_R1 1 RASEDTTSGSPPKKSSAGPK 20 3 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 3 RAS(0.819)EDT(0.436)T(0.436)S(0.436)GS(0.434)PPKKS(0.434)S(0.005)AGPK 59.9 0.017625 1387400000.0 706060.0 800510.0 778300.0 926050.0 715940.0 941790.0 768170.0 911810.0 1092600.0 934500.0 True False 666893.4443042857 762052.2980099935 828470.4633240292 1014061.5135729152 772280.4048586253 935911.9392707375 845824.1202167372 908647.1439280531 894211.3822046067 926221.0570299986 0.7200154209867917 0.8227542358555038 0.8944629978296817 1.094837464421921 0.833797071441027 1.0104628178847643 0.9131989753385 0.9810262215822455 0.9654405667173735 1.0 19.82099703057951 -4.6609169283236715 2.123810791574299 0.9649493401896081 0.7271784338567968 0.6062101210785449 0.06533245427311296 0.23067692710106363 1.8910674760330275 0.01700605071869679 0.07682204765333388 2.1831474634885094e-05 4.6609169283236715 -0.23777090633281128 RAS(ph)EEEENKASEEYIQR ddPTM_KYSE-520_SHP099_60min_R1 1 RASEEEENKASEEYIQR 17 2 Q8IYW5 Q8IYW5 RNF168 E3 ubiquitin-protein ligase RNF168 1 RAS(0.652)EEEENKAS(0.348)EEYIQR 207.67 6.6021e-15 505790000.0 346890.0 346970.0 303340.0 347480.0 339090.0 320540.0 336150.0 442570.0 468750.0 375220.0 True False 327647.32019192865 330301.0403874119 322893.7817611602 380504.39472632826 365774.45384181885 318539.39096172387 370131.3225078515 441034.8279666148 383636.8162258921 371895.84271674237 0.8810190450057922 0.8881546993763748 0.8682371370499427 1.0231477500439354 0.9835400448948123 0.8565285071076799 0.9952553376343204 1.1859095405444817 1.0315705962814228 1.0 18.50453909513352 -7.004233185963724 18.27747427851334 1.0833610716337376 0.9215305002253468 0.524276588197788 0.06643743144449367 4.094962873831948 17678.533186015877 0.02894967605846896 0.01877448179456477 9.903000797775197e-08 7.004233185963724 -0.16183057140839086 RAS(ph)FAEK ddPTM_KYSE-520_SHP099_60min_R1 16 RASFAEK 7 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK;RAS(1)FAEK 131.09 0.0019049 531698700000.0 326132500.0 303789000.0 292279500.0 298007700.0 294866500.0 294627200.0 299346100.0 302012100.0 327595900.0 294802400.0 True False 308041280.09597975 289194520.44341433 311120304.23373514 326330262.20871764 318070815.989114 292788322.35838944 329606925.12440175 300964490.5152538 268112742.58059883 292190680.0887963 1.054247452390906 0.9897458753835973 1.064785174322419 1.1168400789154067 1.0885727631437552 1.0020453844366681 1.1280542042759019 1.0300276874806245 0.917595121443024 1.0 28.122334920799137 -7.5794086350859615 6.466187630581572 0.9613812587291322 1.0625757711756723 0.45612646395024137 0.04514692073284523 0.18911993638920585 16.159760239051025 0.03147150841600668 0.011656028745260952 2.633851983294463e-08 7.5794086350859615 0.1011945124465401 RAS(ph)FAK ddPTM_KYSE-520_SHP099_60min_R1 2 RASFAK 6 1 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;F6UYG0;Q96J92;Q9Y3S1-4;Q9Y3S1;A6PVV2;Q96J92-3;Q9Y3S1-3;Q9Y3S1-2;H0Y7T5;F8W9F9;K7ENT7;Q96J92-2 Q9H4A3-7 WNK1;WNK4;WNK2 Serine/threonine-protein kinase WNK1;Serine/threonine-protein kinase WNK4;Serine/threonine-protein kinase WNK2 1 RAS(1)FAK;RAS(1)FAK 97.635 0.0084446 3654200000.0 4207350.0 3973740.0 3537610.0 3231180.0 3884990.0 4093060.0 3413290.0 3493050.0 3787670.0 3422530.0 True False 3973959.9083557087 3782835.5656946604 3765650.0009761252 3538270.3757103067 4190716.6104306425 4067513.694296485 3758338.6637002053 3480933.424833996 3099924.607390558 3392209.0468880455 1.1714961706152371 1.1151540230590944 1.1100878362525057 1.0430578796304595 1.235394562217542 1.1990751861321614 1.1079325040855135 1.0261553391078138 0.9138365485565743 1.0 21.69379364889971 -7.352902571489568 2.6680223592846186 0.9593822434697664 1.1421946963664351 0.6625482728957255 0.05399627755391264 0.18446179872330642 2.4999095514669483 0.03929849023939419 0.015889519784760064 4.437081731207343e-08 7.352902571489568 0.1828124528966687 RAS(ph)GQAFELILS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 46 RASGQAFELILSPR 14 1 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 2 RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR;RAS(1)GQAFELILS(1)PR 180.9 2.9829e-09 117838201800.0 3730234.5999999996 3980222.0 3801079.0999999996 4189185.3999999994 4107182.9 5432085.6 5583941.199999999 7053721.3 8151678.8 7059119.399999999 True False 3523311.050699682 3789006.160684973 4046102.740727588 4587324.320891487 4430394.827555971 5398181.93884055 6148420.470510419 7029253.587161223 6671539.417019938 6996581.09402778 0.5035761042928737 0.5415510961374028 0.5782971263180678 0.6556522763392519 0.6332228224064632 0.7715456829977131 0.8787749885095532 1.004669779810218 0.9535427843057097 1.0 22.738218685149977 -6.4893408712182445 0.7976580609137894 1.0154087368488443 0.5347433470760244 0.9707774917761306 0.03161280215181318 0.10003885885965019 0.13304540125534794 0.02436110557101927 0.0186423169976395 3.2408514793108097e-07 6.4893408712182445 -0.4806653897728198 RAS(ph)GQAFELILSPR ddPTM_KYSE-520_SHP099_60min_R1 67 RASGQAFELILSPR 14 1 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(0.985)GQAFELILS(0.015)PR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR;RAS(1)GQAFELILSPR 219.53 6.3536e-14 137679103900.0 19419042.200000003 22149796.900000002 21572483.7 20706872.6 21993804.2 22085886.599999998 19644420.4 19481552.199999996 23700928.6 22691378.3 True False 18341829.21826513 21085687.409401048 22963080.516496327 22674847.546155743 23724591.462912183 21948040.389385752 21630270.125099547 19413975.24244667 19397437.418029197 22490350.341887165 0.8155421742854926 0.9375437504915163 1.0210192445836972 1.0082033939651425 1.0548786969639288 0.9758869940104318 0.96175781151858 0.8632135536941414 0.8624782239119873 1.0 24.42280279898518 -9.269309445626542 8.065706109185342 0.9999976923769677 0.9507080875146007 0.043183141726540364 0.07330749268124696 0.0 0.0 0.07762825858487993 0.01882761821636594 5.378863885055583e-10 9.269309445626542 -0.049289604862367 RAS(ph)HTLLPSHR ddPTM_KYSE-520_SHP099_60min_R1 6 RASHTLLPSHR 11 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 RAS(0.752)HT(0.247)LLPSHR;RAS(0.729)HT(0.271)LLPSHR;RAS(0.661)HT(0.339)LLPSHR;RAS(0.919)HT(0.081)LLPSHR;RAS(0.561)HT(0.439)LLPSHR;RAS(0.5)HT(0.5)LLPSHR 122.78 0.00012554 16812430000.0 3574810.0 4068130.0 4116940.0 6025220.0 4073980.0 4406840.0 5659220.0 6143280.0 7012240.0 4227720.0 True False 3376508.163092944 3872690.9284123825 4382324.5397369 6597855.097251547 4394579.0482246345 4379335.2769257035 6231309.186264703 6121970.395532333 5738993.980185276 4190265.689916393 0.8057981075563527 0.9242113066318841 1.0458345279352295 1.5745672435828746 1.0487590461864766 1.045121145292599 1.4870916661108033 1.4609981439278337 1.3696014536729255 1.0 21.99861029233529 -5.009913390276548 4.744721731321595 1.2940820636138377 0.8835519923774293 0.4397484279858701 0.19171300598112762 0.1727637534544412 10.611181056691118 0.05360299199483285 0.1061397439436618 9.774321271521508e-06 5.009913390276548 -0.4105300712364084 RAS(ph)ISEPSDTDPEPR ddPTM_KYSE-520_SHP099_60min_R1 2 RASISEPSDTDPEPR 15 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 RAS(0.998)IS(0.002)EPSDTDPEPR;RAS(0.998)IS(0.002)EPSDTDPEPR 84.759 0.0054798 1295180000.0 1253140.0 1229140.0 1299960.0 973420.0 1089110.0 1224570.0 1035190.0 1040440.0 1376690.0 1246330.0 True False 1183625.8261273443 1170090.269423246 1383757.5016095403 1065933.5441306059 1174816.7608117706 1216927.0043988212 1139837.107680804 1036830.9564805226 1126717.7995307164 1235288.4858300667 0.958177656235493 0.947220250852569 1.1201897512059364 0.8629025173940152 0.9510464756111918 0.9851358758363984 0.9227294844530807 0.8393431723633462 0.9121090437215603 1.0 20.236416573461145 -5.293811525761724 24.99951680551439 0.9215856203941379 1.002398457208331 0.2656934232119669 0.06342629892274994 890.7297185962907 687867.6497247323 0.01817050955790415 0.02695465529151289 5.083800204241304e-06 5.293811525761724 0.08081283681419316 RAS(ph)KLTY ddPTM_KYSE-520_SHP099_60min_R1 2 RASKLTY 7 2 Q6AI12 Q6AI12 ANKRD40 Ankyrin repeat domain-containing protein 40 1 RAS(1)KLTY;RAS(1)KLTY 105.98 0.0029037 943330000.0 749610.0 672270.0 636480.0 438060.0 493930.0 523150.0 480950.0 479430.0 638410.0 613840.0 True False 708027.6389895122 639973.1401021575 677508.5192040072 479693.09069245873 532799.4809227325 519884.8267973608 529569.1196196671 477766.96922980284 522490.8370064455 608401.8551602928 1.163749967203784 1.0518921575831597 1.1135872013827228 0.7884477777702966 0.8757361214527498 0.8545089440274457 0.8704265365531207 0.7852819073076754 0.8587923139530652 1.0 19.21466502662229 -5.253594906937866 24.950730386949846 0.8535639288322122 1.1039580363896866 0.7738604992792106 0.061260846635907036 244.00113899993391 776086.9292301845 0.015605585580060238 0.02639772970155033 5.5770571266875045e-06 5.253594906937866 0.2503941075574744 RAS(ph)LSDIGFGK ddPTM_KYSE-520_SHP099_60min_R1 3 RASLSDIGFGK 11 1 Q07002;D6R9B0;A0A0A0MSJ6;Q07002-3;D6RA44 Q07002 CDK18 Cyclin-dependent kinase 18 1 RAS(0.98)LS(0.02)DIGFGK;RAS(0.999)LS(0.001)DIGFGK;RAS(0.952)LS(0.048)DIGFGK 151.8 3.2497e-05 437110000.0 1726890.0 1427790.0 1177550.0 1180980.0 1290840.0 1221530.0 1225850.0 1225300.0 1590520.0 1290690.0 True False 1631095.9692301329 1359196.8252435173 1253456.757146616 1293219.9841254142 1392421.7641250791 1213905.978166454 1349770.8811430894 1221049.7202871714 1301721.661746358 1279255.4907416257 1.275035347539946 1.0624905150538357 0.9798330092919489 1.0109161097879618 1.08846260516564 0.9489159803900576 1.0551222104667957 0.9545002770160397 1.0175619109453327 1.0 20.286872994932214 -4.280301685619526 2.9443106946798583 1.0081520531207602 1.3141949527051848 0.7991579780940495 0.0402080630822995 0.14741753362200397 1.9035706602228428 0.009838364174081732 0.10447962556848861 5.244430257665208e-05 4.280301685619526 0.30604289958442465 RAS(ph)LSDLTDLEDIEGLTVR ddPTM_KYSE-520_SHP099_60min_R1 12 RASLSDLTDLEDIEGLTVR 19 1 J3KSI3;J3KSU7;K7EN88;Q8WZ73-3;Q8WZ73-2;Q8WZ73 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 1 RAS(0.996)LS(0.004)DLTDLEDIEGLTVR;RAS(0.993)LS(0.007)DLTDLEDIEGLTVR;RAS(0.955)LS(0.045)DLTDLEDIEGLTVR;RAS(0.931)LS(0.065)DLT(0.003)DLEDIEGLTVR;RAS(0.942)LS(0.058)DLTDLEDIEGLTVR;RAS(0.992)LS(0.008)DLTDLEDIEGLTVR;RAS(0.999)LS(0.001)DLTDLEDIEGLTVR;RAS(0.982)LS(0.018)DLTDLEDIEGLTVR;RAS(0.976)LS(0.023)DLTDLEDIEGLTVR;RAS(0.995)LS(0.005)DLTDLEDIEGLTVR;RAS(0.769)LS(0.231)DLTDLEDIEGLTVR;RAS(0.972)LS(0.028)DLTDLEDIEGLTVR 372.89 1.8828999999999996e-78 3466471000.0 689525.0 744393.0 641289.0 672253.0 667654.0 730249.0 580405.0 711273.0 1035789.0 635227.0 True False 651275.6737159904 708631.2429233278 682627.5150386782 736143.7229997658 720194.5713683849 725691.2451188865 639078.0016069297 708805.7599753663 847715.8277158416 629599.382979128 1.0344287039073876 1.1255272194998638 1.0842251969953218 1.1692256106041479 1.1438933881424407 1.1526238187926305 1.015054999868251 1.1258044069570887 1.3464368781694698 1.0 19.264074601410883 -2.979877089747621 1.0031470507473523 1.1350803497058277 1.6439954335124614e-10 0.09074073129081939 0.0901653992879536 54.85450728883429 5.694235602927081 0.028120080782287858 118.46580270667648 0.0010474249392172055 2.979877089747621 -1.1350803495414281 RAS(ph)LSEIGFGK ddPTM_KYSE-520_SHP099_60min_R1 6 RASLSEIGFGK 11 1 Q00537;F5H6Z0;Q00537-2 Q00537 CDK17 Cyclin-dependent kinase 17 1 RAS(0.999)LS(0.001)EIGFGK;RAS(1)LSEIGFGK;RAS(0.905)LS(0.095)EIGFGK;RAS(0.5)LS(0.5)EIGFGK;RAS(0.978)LS(0.022)EIGFGK;RAS(0.992)LS(0.008)EIGFGK 162.64 1.265e-05 6297100000.0 8388250.0 7402810.0 6479740.0 6580800.0 6697970.0 6468320.0 6406440.0 6816280.0 7757800.0 7378910.0 True False 7922937.050938191 7047167.895755651 6897434.408350576 7206237.253410329 7225062.13276383 6427948.815578526 7054065.476029148 6792635.915611709 6349179.078223415 7313538.598105112 1.0833247059078857 0.9635784102625129 0.9431049437734087 0.9853283956520604 0.9879023725445019 0.8789109032998013 0.9645215351508241 0.9287755611724855 0.8681405031305152 1.0 22.80213818107003 -1.000002986493118 0.9718251082961276 0.9393075149641342 117.2520132462001 0.48939970016436984 0.04199237793555341 1235.0685607531934 1.9106700665472622 0.013614611429074958 319611.81903105014 0.09999931233691105 1.000002986493118 116.31270573123597 RAS(ph)LSHPR ddPTM_KYSE-520_SHP099_60min_R1 2 RASLSHPR 8 1 K7EQ05;P28799-3;P28799;K7EKL3 K7EQ05 GRN Granulins;Acrogranin;Paragranulin;Granulin-1;Granulin-2;Granulin-3;Granulin-4;Granulin-5;Granulin-6;Granulin-7 1 RAS(1)LSHPR;RAS(1)LSHPR 85.821 0.003346 512700000.0 137398.0 124145.0 114117.0 89351.0 105633.0 105203.0 99455.0 106662.0 135314.0 89047.0 True False 129776.25904387739 118180.88785455584 121473.16441365576 97842.89217564218 113945.71613044571 104546.38905392852 109508.8819872626 106292.01441709799 110744.38858835283 88258.11285751768 1.4704173343631974 1.3390371041056015 1.3763399248039652 1.108599413785314 1.29105090105878 1.184552735936087 1.2407797815035064 1.2043313750509703 1.2547785693892706 1.0 16.429441279364962 -1.0000000000000002 0.11872550334222193 0.9845811727057547 2.334546707807471 0.6341014842202067 0.07723703121368665 67.6949705258856 0.5547775350283454 0.5629891024084779 15.095050817506296 0.09999999999999995 1.0000000000000002 1.3499655351017161 RAS(ph)LTLEEK ddPTM_KYSE-520_SHP099_60min_R1 7 RASLTLEEK 9 1 Q6P3W7;A0A0U1RQQ9 Q6P3W7 SCYL2 SCY1-like protein 2 1 RAS(1)LTLEEK;RAS(1)LTLEEK;RAS(0.99)LT(0.01)LEEK;RAS(0.992)LT(0.008)LEEK;RAS(1)LTLEEK;RAS(0.999)LT(0.001)LEEK;RAS(0.99)LT(0.01)LEEK 190.37 3.1881e-06 6776690000.0 6380450.0 5746380.0 5334610.0 5317820.0 6185500.0 5961920.0 6205910.0 6163260.0 7167360.0 6557740.0 True False 6026513.719388255 5470315.279307774 5678487.496277787 5823224.013939119 6672263.659319253 5924709.445818065 6833263.946644948 6141881.089575699 5865948.098442251 6499643.525444524 0.927206806926552 0.8416331230924926 0.873661374511985 0.8959297523229717 1.0265584001951742 0.9115437519956698 1.0513290336453653 0.9449566065479941 0.9025030488946801 1.0 22.631929164668936 -5.611656090423301 7.161442700845048 0.9707303737749409 0.87820768352163 0.44876473263719974 0.048029636719313526 0.20066050673277835 13.700335597920915 0.013856437532420525 0.01792045253406917 2.4453662253915534e-06 5.611656090423301 -0.09252269025331084 RAS(ph)MQPIQIAEGTGITTR ddPTM_KYSE-520_SHP099_60min_R1 6 RASMQPIQIAEGTGITTR 18 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 RAS(1)MQPIQIAEGTGITTR;RAS(1)MQPIQIAEGTGITTR;RAS(0.997)MQPIQIAEGT(0.002)GIT(0.001)T(0.001)R;RAS(1)MQPIQIAEGTGITTR;RAS(0.999)MQPIQIAEGTGITT(0.001)R;RAS(1)MQPIQIAEGTGITTR 277.85 1.6056999999999998e-30 7718850000.0 2951150.0 2706660.0 2394860.0 2122840.0 2181600.0 2949270.0 2815330.0 3464610.0 3990030.0 3073300.0 True False 2787443.826528326 2576627.990820511 2549236.5075114844 2324594.0753448806 2353279.5083939712 2930862.5119538424 3099931.0313729886 3452592.0765560516 3265541.1324710296 3046072.9529912155 0.915094244145099 0.845885187447755 0.8368927950357058 0.7631445836062957 0.772561768779396 0.9621773861574006 1.017681151834819 1.1334567916916232 1.0720495480137133 1.0 21.5385190638934 -6.574210686835764 2.4669611506895754 1.071310663212898 0.8256107267212466 0.8080804890495231 0.05252545360083231 0.12242579210272407 1.5097301081383905 0.023737896458422017 0.017917759492314254 2.665565220165175e-07 6.574210686835764 -0.24569993649165134 RAS(ph)PGLSMPSSS(ph)PPIK ddPTM_KYSE-520_SHP099_60min_R1 1 RASPGLSMPSSSPPIK 16 1 P57682;P57682-2 P57682 KLF3 Krueppel-like factor 3 2 RAS(0.999)PGLS(0.001)MPS(0.006)S(0.455)S(0.538)PPIK 168.62 4.7786e-08 407590000.0 598150.0 604000.0 469790.0 467000.0 525560.0 540290.0 486010.0 515030.0 735250.0 536610.0 True False 564969.4271175372 574982.9333775165 500073.41509057645 511383.5395913306 566918.5819726501 536917.8496996006 535140.6338005076 513243.4811389053 601747.134144185 531856.0528762628 1.0622600308151016 1.0810875052902467 0.9402420305009095 0.961507416951979 1.0659248473468905 1.0095172308295897 1.0061756952966538 0.965004493910145 1.1314097694102627 1.0 19.02067630681314 -7.748483766688154 24.99870748535429 1.0657049414038287 1.0113204243958687 0.1405338762276348 0.0536531173504592 398.72473674033694 769375.2905863452 0.03704470661629934 0.013812845035664137 1.784498689324117e-08 7.748483766688154 -0.05438451700795999 RAS(ph)PNLFSEAQYQEAPVEK ddPTM_KYSE-520_SHP099_60min_R1 3 RASPNLFSEAQYQEAPVEK 19 1 F6VUX8;Q9HC77-2;Q9HC77 F6VUX8 CENPJ Centromere protein J 1 RAS(0.994)PNLFS(0.006)EAQYQEAPVEK;RAS(1)PNLFSEAQYQEAPVEK;RAS(1)PNLFSEAQYQEAPVEK 209.16 1.1793999999999999e-18 1854190000.0 1656170.0 1633010.0 1484000.0 1381090.0 1372910.0 1509980.0 1286120.0 1639270.0 1905320.0 1685060.0 True False 1564298.9486069551 1554557.7484020183 1579661.0144839534 1512348.3783601522 1480950.2062106542 1500555.654721359 1416133.5609216047 1633583.7549784945 1559361.9172085687 1670131.6793568407 0.9366321038885741 0.9307995097731879 0.9458302204603848 0.9055264306719516 0.8867266123476927 0.8984654762666471 0.8479173100093226 0.9781167408354169 0.9336760307481091 1.0 20.671530423919197 -7.304812694631536 24.99999232623393 0.9669223202496825 0.908578473726041 0.4736136803262049 0.030433714954093003 489.50095454176346 282141.63875537284 0.017494769984158942 0.008404279818054628 4.9566391789341e-08 7.304812694631536 -0.05834384652364155 RAS(ph)PNSDDTVLSPQELQK ddPTM_KYSE-520_SHP099_60min_R1 2 RASPNSDDTVLSPQELQK 18 1 Q9UH62 Q9UH62 ARMCX3 Armadillo repeat-containing X-linked protein 3 1 RAS(0.993)PNS(0.007)DDTVLSPQELQK;RAS(0.981)PNS(0.019)DDTVLSPQELQK 239.22 9.2999e-24 1438110000.0 838290.0 807210.0 671230.0 551080.0 688440.0 757170.0 583060.0 909500.0 1014970.0 764550.0 True False 791788.3826103159 768430.419953088 714498.559805973 603454.4775117559 742616.3113122232 752444.2211720491 642001.3949172327 906345.1567788963 830677.0333115583 757776.6818109 1.0448835410429052 1.0140592055653233 0.942888026190641 0.7963487027202368 0.9799936170344444 0.9929630183049343 0.8472171423683916 1.1960583883538805 1.0962029490356504 1.0 19.531413220573523 -7.2639323436767755 24.99659819371063 1.1095979993378182 0.9454350899249627 0.4083482265490138 0.08342603218496529 212.76313265239835 2133309.869349801 0.04402352563233773 0.022660388474408495 5.4458748449153644e-08 7.2639323436767755 -0.1641629094128555 RAS(ph)PS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 10 RASPSPPPK 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RAS(1)PS(1)PPPK;RAS(1)PS(1)PPPK;RAS(1)PS(1)PPPK;RAS(1)PS(1)PPPK;RAS(1)PS(1)PPPK;RAS(1)PS(1)PPPK;RAS(1)PS(1)PPPK;RAS(1)PS(1)PPPK;RAS(1)PS(1)PPPK;RAS(1)PS(1)PPPK 109.15 0.0014971 21475480000.0 16408700.0 14582340.0 13301010.0 13421840.0 14263710.0 14409440.0 13134720.0 14089980.0 16242480.0 14060070.0 True False 15498476.701067515 13881782.497861408 14158414.386968445 14697447.638176654 15386182.827591753 14319505.34004963 14462505.680114007 14041105.148006042 13293255.071600461 13935508.71836892 1.11215722470457 0.9961446530877848 1.0159955171428874 1.0546760749970607 1.1040991138924583 1.027555263997973 1.0378168441780982 1.0075775080602498 0.9539124362268971 1.0 23.732262333468604 -7.350823490915246 2.1875560552438156 0.9771368984007291 1.0492744704947088 0.41099820489844063 0.03553700742145031 0.34435981027421125 3.0719018773882905 0.02689225822827329 0.010304427959412388 4.4583741202547446e-08 7.350823490915246 0.07213757209397964 RAS(ph)PS(ph)PPPKR ddPTM_KYSE-520_SHP099_60min_R1 6 RASPSPPPKR 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RAS(1)PS(1)PPPKR;RAS(1)PS(1)PPPKR;RAS(1)PS(1)PPPKR;RAS(1)PS(1)PPPKR;RAS(1)PS(1)PPPKR;RAS(1)PS(1)PPPKR 109.6 0.0056029 61770380000.0 3043810.0 2828790.0 2819800.0 2762560.0 2743000.0 2839070.0 2763090.0 2799967.0 3301440.0 2642860.0 True False 2874963.7916151946 2692890.682299643 3001568.8198395204 3025112.871806052 2958858.494464917 2821350.3110304577 3042410.102359717 2790254.5679942127 2701981.718529723 2619446.3165139686 1.0975463682879654 1.0280381259667943 1.1458791122828167 1.1548672911273692 1.129574015627336 1.077078882374344 1.1614706830138974 1.0652077694447888 1.031508720562594 1.0 21.320830464737256 -7.669326272148159 2.5561088559131036 1.00772676750675 1.1123668906690323 0.508614471604331 0.038519753644250546 0.24478425594094133 2.963092994777042 0.03603447664637451 0.010790690692302707 2.141281317595281e-08 7.669326272148159 0.10464012316228222 RAS(ph)PSKPAS(ph)APASR ddPTM_KYSE-520_SHP099_60min_R1 1 RASPSKPASAPASR 14 2 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-4;B5MEG9;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 2 RAS(0.927)PS(0.095)KPAS(0.971)APAS(0.007)R 50.226000000000006 0.066513 417670000.0 482560.0 462480.0 416940.0 397280.0 400150.0 371100.0 342490.0 391560.0 510080.0 406130.0 True False 455791.4348404888 440261.7666033678 443816.6195275866 435037.37175341224 431639.52845794277 368783.8272474447 377112.2315802885 390201.7697507914 417462.3300704066 402532.00416435924 1.1323110463892034 1.0937310873388417 1.102562317868197 1.0807522563492382 1.072311080839422 0.9161602641087522 0.9368503067555058 0.9693683128645513 1.0370910281706474 1.0 18.6187439667663 -6.114643049014343 4.957590299844188 0.9682374462376451 1.0990852427523268 0.780035117897584 0.03324776735274752 0.110036679015482 4.0517608625826185 0.011740009410752239 0.011818695117712254 7.6799245071895e-07 6.114643049014343 0.1308477965146817 RAS(ph)PSKPASAPASR ddPTM_KYSE-520_SHP099_60min_R1 8 RASPSKPASAPASR 14 2 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-4;B5MEG9;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 RAS(0.958)PS(0.042)KPASAPASR;RAS(0.916)PS(0.084)KPASAPASR;RAS(0.99)PS(0.01)KPASAPASR;RAS(0.989)PS(0.01)KPASAPASR;RAS(0.977)PS(0.023)KPASAPASR;RAS(0.499)PS(0.499)KPAS(0.001)APAS(0.001)R;RAS(0.853)PS(0.146)KPAS(0.001)APASR;RAS(0.967)PS(0.033)KPASAPASR 112.16 0.00012049 242208190000.0 6168570.0 5457650.0 5306730.0 5407690.0 5467820.0 5100060.0 4772620.0 5408130.0 6424720.0 5359290.0 True False 5826387.12536057 5195456.301900341 5648810.3068682095 5921635.231718718 5898106.326359887 5068228.633768793 5255083.005882553 5389370.459297034 5258152.802011329 5311810.860064533 1.0968739811812098 0.9780951240114792 1.0634434198960885 1.114805362562698 1.110375817539601 0.9541432794365762 0.9893204303247178 1.0146013480667417 0.9898983492698097 1.0 22.34077234626033 -6.26353462295342 24.999725322070763 0.9904882498913444 1.0692847234682514 0.5365649445189966 0.03855648417829942 174.1784218648254 2078233.1136912054 0.014319826682690892 0.013291549698055391 5.450864384140584e-07 6.26353462295342 0.078796473576907 RAS(ph)PSPPPK ddPTM_KYSE-520_SHP099_60min_R1 1 RASPSPPPK 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RAS(0.898)PS(0.102)PPPK 69.721 0.023903 0.0 283250.0 290500.0 254330.0 226850.0 238870.0 270220.0 232740.0 241850.0 320060.0 257090.0 True False 267537.5578551237 276543.94395060994 270724.5187423877 248409.7557950608 257667.71001561588 268533.45674698014 256267.6305235086 241011.0787982144 261945.1720560191 254812.38261299313 1.0499393911380575 1.0852845576606946 1.0624464791162123 0.974873172362049 1.0112056069384956 1.0538477525828345 1.0057110564863156 0.9458373895599099 1.0279923187793396 1.0 17.95907586152982 -5.179848634319134 6.931847298543282 1.0031974290468095 1.0686142230307214 0.510790236902712 0.02828898982342009 0.21774312753984087 15.816839544457551 0.008018415050971698 0.013990071628878066 6.609237611879667e-06 5.179848634319134 0.06541679398391187 RAS(ph)PSPPPKR ddPTM_KYSE-520_SHP099_60min_R1 4 RASPSPPPKR 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RAS(0.941)PS(0.059)PPPKR;RAS(0.943)PS(0.057)PPPKR;RAS(0.998)PS(0.002)PPPKR;RAS(0.582)PS(0.418)PPPKR 101.39 0.0012043 1864600000.0 1053740.0 880160.0 771405.0 889590.0 730732.0 892930.0 842940.0 876330.0 860990.0 744323.0 True False 995286.9416213873 837875.7924529058 821131.0005916402 974136.3661350129 788236.4511036586 887356.8926544334 928152.6015016162 873290.2157669589 704655.9197916383 737728.877294532 1.349122926123478 1.135750298301514 1.1130525398476583 1.320453077162245 1.0684635987062792 1.2028225001963202 1.2581215539581747 1.1837549574710564 0.9551692247371664 1.0 19.492731183338844 -7.7400855825961 7.762907080588878 0.9770809161989116 1.2001307434836848 0.5378980721490296 0.08387723339576572 0.11360280831470948 31.337325751158403 0.05880562726047285 0.020624358886783763 1.8193423014869593e-08 7.7400855825961 0.22304982728477318 RAS(ph)QEANLLTLAQK ddPTM_KYSE-520_SHP099_60min_R1 11 RASQEANLLTLAQK 14 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK;RAS(0.999)QEANLLT(0.001)LAQK;RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK;RAS(1)QEANLLTLAQK 260.25 1.3055000000000003e-24 20503440000.0 13417000.0 12978040.0 12724250.0 11989340.0 12634740.0 15007320.0 14866760.0 18788640.0 20879370.0 17129630.0 True False 12672732.2638736 12354555.477964824 13544475.51451983 13128803.26887349 13629022.156163197 14913653.749197297 16369637.186395422 18723466.593141552 17088202.734085124 16977874.804850474 0.7464262994949803 0.7276856273221666 0.7977721399294484 0.7732889669514275 0.8027519529281409 0.8784169939182587 0.9641746905636692 1.102815682666736 1.0064983356576012 1.0 24.01715254593005 -6.604985176894356 1.4326709868266874 1.0438589410456751 0.7616631794824786 0.9252368242367177 0.03374312966412861 0.0983791574936351 0.4115754146819378 0.01833687358757363 0.012447873865373228 2.4832178597053994e-07 6.604985176894356 -0.2821957615631965 RAS(ph)S(ph)KGGGGYTCQSGSGWDEFTK ddPTM_KYSE-520_SHP099_60min_R1 2 RASSKGGGGYTCQSGSGWDEFTK 23 2 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 2 RAS(0.947)S(0.749)KGGGGY(0.206)T(0.09)CQS(0.004)GS(0.003)GWDEFTK;RAS(1)S(1)KGGGGYTCQSGSGWDEFTK 226.07 1.5398e-21 2517910000.0 1275130.0 1260170.0 1211550.0 1194360.0 1794200.0 2471540.0 2805340.0 3479230.0 4854600.0 3253490.0 True False 1204395.9969913645 1199629.5416462675 1289648.4515485393 1307871.6153025718 1935393.3323984514 2456114.202088785 3088931.1446799817 3467161.363188383 3973127.014507121 3224666.609776914 0.3734947337934838 0.372016610340149 0.39993233645873194 0.4055835140715684 0.6001840086446468 0.7616645375500388 0.957907132264342 1.0751999455311894 1.232104739901154 1.0 21.620718580934685 -6.452252930347675 1.0475791221466233 1.129757185330737 0.36967559292955887 0.9645286022762328 0.05901704714754838 0.08229462947612524 0.18678943875120219 0.03497618859160004 0.026403437783199476 3.5297753804237107e-07 6.452252930347675 -0.7600815924011782 down RAS(ph)SASVPAVGASAEGTR ddPTM_KYSE-520_SHP099_60min_R1 5 RASSASVPAVGASAEGTR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 RAS(0.556)S(0.444)ASVPAVGASAEGTR;RAS(0.794)S(0.202)AS(0.004)VPAVGASAEGTR;RAS(0.494)S(0.494)AS(0.012)VPAVGASAEGTR;RAS(0.771)S(0.228)AS(0.001)VPAVGASAEGTR;RAS(0.882)S(0.118)ASVPAVGASAEGTR 221.99 2.0094000000000003e-18 3822720000.0 2631910.0 2246990.0 2045800.0 1842200.0 1936820.0 2162790.0 2100970.0 2396190.0 2524050.0 2320700.0 True False 2485912.7057174873 2139041.227599251 2177675.5413957336 2017282.1341223721 2089236.7150016562 2149291.225363787 2313356.5510912403 2387878.1761649484 2065746.1461225846 2300140.40347728 1.0807656358539517 0.929961155573597 0.9467576579688753 0.8770256507266724 0.9083083414574231 0.9344174043091265 1.0057458003841768 1.038144529157885 0.8980956740726151 1.0 21.13329049711036 -6.753439486994109 24.9768830976913 0.988675212939565 0.940625464467511 0.0881155073215204 0.05999166252185742 387.42194575845883 1209594.9103703864 0.023497150571928485 0.017865063738158344 1.7642515717172614e-07 6.753439486994109 -0.0480497484720539 RAS(ph)SDLS(ph)IASSEEDKLSQNACILESVSEK ddPTM_KYSE-520_SHP099_60min_R1 2 RASSDLSIASSEEDKLSQNACILESVSEK 29 2 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 2 RAS(0.417)S(0.417)DLS(0.31)IAS(0.285)S(0.285)EEDKLS(0.285)QNACILES(0.001)VSEK;RAS(0.506)S(0.514)DLS(0.589)IAS(0.295)S(0.094)EEDKLS(0.001)QNACILESVSEK 100.82 0.0012806 447210000.0 335610.0 345390.0 321760.0 353610.0 357090.0 336410.0 353080.0 365170.0 459290.0 341460.0 True False 316993.0442780516 328796.9459590408 342501.16443420236 387216.988083277 385190.9514358277 334310.34040504636 388772.77212872833 363903.31050131895 375894.51375869877 338434.9300518605 0.9366439930697364 0.9715218990801486 1.0120148188655314 1.1441401395061122 1.1381536515063693 0.9878127542976072 1.148737135582176 1.0752534037948025 1.1106847443350427 1.0 18.368518951913416 -4.9832880348306405 3.3116014702161944 1.0900674818563882 0.9550132460727723 0.49783022759845774 0.05371609812522417 0.18538443082879139 4.2524368973773035 0.014318867203270441 0.03149617105303569 1.0392306937441998e-05 4.9832880348306405 -0.13505423578361597 RAS(ph)SDLSIASSEEDKLSQNACILESVSEK ddPTM_KYSE-520_SHP099_60min_R1 3 RASSDLSIASSEEDKLSQNACILESVSEK 29 2 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 RAS(0.471)S(0.471)DLS(0.039)IAS(0.008)S(0.011)EEDKLSQNACILESVSEK;RAS(0.446)S(0.446)DLS(0.092)IAS(0.006)S(0.01)EEDKLSQNACILESVSEK;RAS(0.445)S(0.445)DLS(0.072)IAS(0.019)S(0.019)EEDKLSQNACILESVSEK 240.46 3.5558e-31 4977470000.0 736730.0 751510.0 759990.0 716490.0 777670.0 702160.0 745500.0 848800.0 1012980.0 810910.0 True False 695862.1182651564 715406.3315604925 808980.1714269947 784584.994179427 838868.2046629724 697777.5589869731 820862.4153788585 845855.710911409 829048.3671477423 803725.9682784341 0.8657952408277662 0.8901122519319357 1.0065373066890138 0.9761847011861434 1.04372415197659 0.8681784420647742 1.0213212559712737 1.0524180433328738 1.0315062594326128 1.0 19.616344170374937 -4.714560360458994 4.87319896415368 0.9988267123140891 0.8728514232434533 0.49661048251830664 0.04926568443359373 0.16304742756198176 8.354240868306817 0.013172499232925511 0.0356547105815512 1.929477148991906e-05 4.714560360458994 -0.12597528907063582 RAS(ph)SGLPR ddPTM_KYSE-520_SHP099_60min_R1 2 RASSGLPR 8 1 Q9UJZ1-2;Q9UJZ1 Q9UJZ1-2 STOML2 Stomatin-like protein 2, mitochondrial 1 RAS(0.5)S(0.5)GLPR;RAS(0.997)S(0.003)GLPR 106.58 0.0010410999999999999 437910000.0 1168222.0 1231869.0 968207.0 895981.0 1437589.0 1369020.0 865825.0 813415.0 1131700.0 1982347.0 True False 1103418.39686718 1172688.164166933 1030619.1724059724 981134.764853489 1550719.0755374846 1360475.4383678169 953351.0406376937 810593.4532174877 926211.807835395 1964784.9478226283 0.5615975418022143 0.5968531902010468 0.5245455354022857 0.49935987444365404 0.7892563902507443 0.6924296930692052 0.48521902699539504 0.4125609034799387 0.4714062008983841 1.0 20.905939982729986 -10.45245353354792 2.92578207044573 1.0109327600891618 0.5617620479941309 0.6102599475204957 0.1056514200954447 23766252.801396374 27297730.633969467 2131293.424185472 0.03058913678206543 3.528145332707289e-11 10.45245353354792 -0.4491707120950309 RAS(ph)SKGGGGY(ph)TCQSGSGWDEFTK ddPTM_KYSE-520_SHP099_60min_R1 1 RASSKGGGGYTCQSGSGWDEFTK 23 2 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 2 RAS(0.969)S(0.266)KGGGGY(0.546)T(0.165)CQS(0.044)GS(0.01)GWDEFTK 92.822 0.0065175 1648700000.0 757390.0 772800.0 726090.0 770220.0 985780.0 1469800.0 1607800.0 1953400.0 2773600.0 1772000.0 True False 715376.0668804672 735673.5280035518 772894.9231850766 843421.4772249125 1063355.277679047 1460626.4330053716 1770332.1146158667 1946624.1113269853 2269984.1567661497 1756301.4585951406 0.4073196337562084 0.4188765683722739 0.44006962438174624 0.4802259162840771 0.6054514573651959 0.8316490462712031 1.0079887515620178 1.1083655950978275 1.2924797993289274 1.0 20.74410906538937 -6.427878690651466 1.1148230758155053 1.1593313769533575 0.4170815342611364 0.9516364996739498 0.06864732089323264 0.09134477452876692 0.23396869328744305 0.03825038236619056 0.02956100811918026 3.733544304947794e-07 6.427878690651466 -0.742249842692221 down RAS(ph)SLNFLNK ddPTM_KYSE-520_SHP099_60min_R1 1 RASSLNFLNK 10 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 RAS(0.5)S(0.5)LNFLNK 116.52 0.00096541 1139800000.0 573680.0 496050.0 539270.0 443410.0 532790.0 502400.0 425390.0 458930.0 641160.0 520800.0 True False 541856.8267972723 472219.0134137705 574032.2070625074 485551.5530839224 574717.5418395778 499264.3352441823 468392.5726063213 457338.07894506765 524741.5063283048 516186.1171762687 1.049731499485945 0.9148231571917999 1.1120644046040573 0.9406520960696719 1.1133920938895023 0.9672176732984318 0.9074102480101635 0.8859945351627784 1.0165742333382333 1.0 18.977531815112624 -6.509134328497309 24.747448715104643 0.9421828125654758 1.0220069613395675 0.20015444733584797 0.0696996283630515 832.4919115485282 1498944.1573304068 0.023820460260166754 0.02013718342504057 3.096461406915617e-07 6.509134328497309 0.07982414877409172 RAS(ph)SLNVLNVGGK ddPTM_KYSE-520_SHP099_60min_R1 2 RASSLNVLNVGGK 13 1 H0YG16;Q07866-4;Q07866-6;Q07866-7;Q07866-9;G3V5R9;H0YJK1 H0YG16 KLC1 Kinesin light chain 1 1 RAS(0.5)S(0.5)LNVLNVGGK;RAS(0.824)S(0.176)LNVLNVGGK 178.0 1.8277000000000001e-07 3528290000.0 5251500.0 5286000.0 4924800.0 3563400.0 4005200.0 4426900.0 3655700.0 4005600.0 5655300.0 4243100.0 True False 4960188.826394292 5032052.625552243 5242260.48795861 3902064.4646247197 4320386.453529302 4399270.075024818 4025253.8321938175 3991705.5085140644 4628440.078511541 4205509.435081844 1.1794501719618091 1.1965381847857661 1.246522108410533 0.9278458471818364 1.027315838953818 1.0460730484460803 0.9571382241151675 0.9491609922963783 1.1005658529503373 1.0 22.003849141492992 -5.255967831332792 24.9932251423488 1.000166145432353 1.206406968001545 0.781197302233848 0.05004111398585571 199.31715073090263 910449.1805233106 0.013578291796762804 0.022654087964394824 5.546667962125162e-06 5.255967831332792 0.20624082256919207 RAS(ph)SPFR ddPTM_KYSE-520_SHP099_60min_R1 4 RASSPFR 7 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 RAS(0.5)S(0.5)PFR;RAS(0.764)S(0.236)PFR;RAS(0.904)S(0.096)PFR;RAS(0.897)S(0.103)PFR 106.35 0.003654 42533800000.0 8933820.0 8334180.0 7866090.0 7908360.0 7885220.0 8696190.0 7340390.0 8194220.0 9208790.0 8224240.0 True False 8438243.195471363 7933793.4829407735 8373150.7475890005 8659968.156664867 8505741.953235386 8641913.852522112 8082428.25650277 8165796.16336533 7536705.870704712 8151379.6319619 1.0351920259467071 0.9733068316229608 1.0272065743027754 1.0623929380872865 1.0434726803649308 1.0601780609796172 0.9915411404483274 1.0017686001700745 0.9245926715464182 1.0 22.95861282740927 -7.183361292066659 2.1262307867539234 0.9673170349240509 1.0316168074593774 0.4199728459807691 0.03086542235098401 0.33437832694110675 2.8806444197583945 0.020941423998373416 0.009379046302747364 6.555996422835257e-08 7.183361292066659 0.0642997725353266 RAS(ph)SPFRR ddPTM_KYSE-520_SHP099_60min_R1 1 RASSPFRR 8 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 RAS(0.952)S(0.048)PFRR 55.806000000000004 0.038696 1756600000.0 112920.0 120190.0 45374.0 256810.0 110090.0 140140.0 87481.0 212180.0 92902.0 122070.0 True False 106656.1024995608 114415.8919911321 48298.8806409669 281217.14518725785 118753.4566735845 139265.33427770645 96324.43321228419 211443.99710318423 76033.33866883801 120988.55476902289 0.8815387761526376 0.945675334411271 0.39920206281638326 2.3243284930886605 0.9815263675171145 1.1510620532956646 0.7961450022787318 1.7476363570657425 0.6284341425020897 1.0 16.884511052854492 RAS(ph)WASENGETDAEGTQMTPAK ddPTM_KYSE-520_SHP099_60min_R1 1 RASWASENGETDAEGTQMTPAK 22 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 1 RAS(0.844)WAS(0.156)ENGETDAEGTQMTPAK 120.15 7.6338e-06 262630000.0 243220.0 253820.0 226160.0 248130.0 224390.0 252350.0 232170.0 271210.0 338150.0 236870.0 True False 229728.10175295055 241626.10620841262 240738.63546879415 271712.2005969952 242048.2163955457 250774.99004552036 255640.00936084424 270269.23581089015 276750.48406780855 234771.5160820717 0.9785177758644363 1.0291968559079572 1.0254167093449125 1.1573473866480877 1.0309948175779986 1.0681661652593926 1.0888885228797403 1.1512011351343368 1.1788077560953425 1.0 17.84089785690563 -3.8534845891460003 0.578427750758899 1.1058080643059893 0.8234757950382685 0.3151216364197733 0.05542776151182747 6.761898938364388 1.2272400162199575 0.028379948031237515 1.4142831753164775 0.0001401249307112993 3.8534845891460003 -0.2823322692677208 RAS(ph)YDYNQDR ddPTM_KYSE-520_SHP099_60min_R1 4 RASYDYNQDR 10 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 RAS(1)YDYNQDR;RAS(1)YDYNQDR;RAS(1)YDYNQDR;RAS(0.999)Y(0.001)DYNQDR 132.21 2.6351e-05 765344000.0 588489.0 624586.0 628617.0 597476.0 611636.0 712818.0 678563.0 725689.0 901325.0 766077.0 True False 555844.3420462626 594579.9510373003 669138.6576427614 654259.9394022899 659768.2734672056 708369.0384555891 747158.7701766932 723171.7542360864 737667.1005542433 759290.1537788882 0.7320578823258773 0.7830734378394786 0.8812687143545131 0.8616731510953006 0.8689277349161251 0.9329358940454169 0.9840227302542794 0.9524313605766581 0.9715220155074714 1.0 19.534291774340435 -2.3102659109046266 0.25732921680820836 1.0073127805927462 1.3821138485494721e-11 0.9285852549645758 0.02244900401149242 6.659621998550235 0.16469635158629764 0.030979380710024543 2.5546816855035885 0.004894790281636123 2.3102659109046266 -1.007312780578925 RASDT(ph)SLTQGIVAFR ddPTM_KYSE-520_SHP099_60min_R1 2 RASDTSLTQGIVAFR 15 1 Q9H0K1 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 1 RAS(0.008)DT(0.741)S(0.229)LT(0.022)QGIVAFR;RAS(0.012)DT(0.885)S(0.102)LT(0.001)QGIVAFR 202.81 1.5467e-11 527580000.0 780290.0 724680.0 683930.0 608570.0 645420.0 647230.0 617680.0 605040.0 752510.0 690290.0 True False 737005.7582304492 689865.285033143 728017.2221266904 666408.3098267572 696210.8820625396 643190.3974922213 680121.1223758729 602941.2574573972 615873.1532333781 684174.567637494 1.0772188752577947 1.008317639480958 1.0640810935732212 0.9740325661737399 1.0175924610390121 0.9400969108121133 0.9940754224822798 0.8812681528625048 0.9001696092855866 1.0 19.384004951203828 -5.9406852791212446 0.7592236998777034 0.9273232868148622 1.052849582467627 0.5274120245151086 0.0416800478315368 0.5209257888153707 0.6662145474999212 0.025030727640547236 0.03502112838822542 1.146343363001193e-06 5.9406852791212446 0.12552629565276474 RASEDT(ph)TSGSPPKK ddPTM_KYSE-520_SHP099_60min_R1 1 RASEDTTSGSPPKK 14 2 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 RASEDT(0.521)T(0.144)S(0.158)GS(0.178)PPKK 180.27 1.108e-07 622940000.0 843280.0 736730.0 718730.0 707860.0 734950.0 727090.0 707680.0 702130.0 897880.0 709450.0 True False 796501.5773629965 701336.3849457256 765060.4858086598 775134.8015741308 792786.3837065225 722551.9616096594 779219.2006912269 699694.4749083731 734847.6257128613 703164.8249437476 1.1327380851661852 0.9973996992836376 1.0880243986463114 1.1023515029156084 1.1274545534469027 1.027571254957844 1.108160097106057 0.9950646705974632 1.0450574312667706 1.0 19.42350337747149 -7.26551583770814 24.98508511663652 1.0150457863208837 1.0805346226904937 0.36934120591024155 0.04179087982765854 394.33178288889445 2416883.506143926 0.021301598404213865 0.010813350827722928 5.426054634108635e-08 7.26551583770814 0.06548883636961 RASEDTTS(ph)GSPPKK ddPTM_KYSE-520_SHP099_60min_R1 2 RASEDTTSGSPPKK 14 2 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 RASEDT(0.06)T(0.248)S(0.346)GS(0.346)PPKK;RASEDT(0.036)T(0.02)S(0.472)GS(0.472)PPKK 160.02 3.2671999999999996e-08 26790700000.0 2378320.0 1963140.0 1896710.0 1933000.0 2207860.0 2070590.0 1959060.0 2070830.0 2491900.0 1918080.0 True False 2246389.848536623 1868827.8076667858 2018974.9614432994 2116711.73882236 2381606.0209950097 2057666.6797636354 2157100.903383106 2063646.7740653546 2039433.7756870403 1901087.303443657 1.1816342387156444 0.9830310287599965 1.0620106492669217 1.113421637706021 1.2527599425239093 1.0823630645664448 1.134666934798682 1.0855086824930318 1.0727722877285963 1.0 20.8583933555732 -10.621086865277825 6.144998471241731 0.9995004245346658 1.106419627640961 0.18039566478108116 0.0687493250999017 0.0004861617738315091 2.9977662006489887e-05 0.06877676671036684 0.016603697730576596 2.3928371059573184e-11 10.621086865277825 0.10691920310629521 RASEDTTSGS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 3 RASEDTTSGSPPK 13 1 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 RASEDT(0.039)T(0.039)S(0.192)GS(0.73)PPK;RASEDT(0.014)T(0.012)S(0.071)GS(0.903)PPK;RASEDT(0.011)T(0.008)S(0.204)GS(0.778)PPK 69.737 0.015474000000000002 1996000000.0 1715570.0 1570610.0 1491350.0 1256080.0 1588370.0 1530900.0 1376440.0 1480550.0 1830320.0 1509420.0 True False 1620403.9121959908 1495155.538066328 1587484.8072443693 1375457.4655457758 1713365.6824109498 1521345.0852414798 1515583.9879598587 1475414.3176129689 1497980.0266124248 1496047.7131109894 1.08312315041504 0.9994036453270557 1.061119102908315 0.9193941165723588 1.145261389322974 1.0169094688015565 1.0130585907639564 0.9862080632073466 1.0012916122156406 1.0 20.51272475682975 -6.779780584641912 3.2246400185490076 0.9970577577820136 1.0369953545387127 0.10753940749738289 0.05491852812042354 0.6103832977019378 13.130079742562597 0.023573332407710014 0.01604030037554328 1.6604255799784762e-07 6.779780584641912 0.03993759675669917 RASEDTTSGS(ph)PPKK ddPTM_KYSE-520_SHP099_60min_R1 11 RASEDTTSGSPPKK 14 2 H0YER7;G3V1C3;Q9BZZ5-1;Q9BZZ5-5;Q9BZZ5-2;Q9BZZ5-6;Q9BZZ5 H0YER7 API5 Apoptosis inhibitor 5 1 RASEDT(0.118)T(0.118)S(0.118)GS(0.647)PPKK;RASEDT(0.182)T(0.182)S(0.182)GS(0.454)PPKK;RASEDT(0.029)T(0.009)S(0.049)GS(0.913)PPKK;RASEDT(0.007)T(0.017)S(0.017)GS(0.959)PPKK;RASEDT(0.001)TS(0.002)GS(0.996)PPKK;RASEDTT(0.002)S(0.048)GS(0.95)PPKK;RASEDT(0.092)T(0.092)S(0.116)GS(0.699)PPKK;RASEDT(0.002)T(0.04)S(0.258)GS(0.7)PPKK;RASEDTTS(0.006)GS(0.993)PPKK;RAS(0.003)EDT(0.153)T(0.153)S(0.052)GS(0.64)PPKK;RASEDTT(0.001)S(0.055)GS(0.944)PPKK 182.81 6.0805e-10 110527900000.0 13743870.0 11863580.0 11690870.0 11122950.0 12281540.0 12218830.0 11321680.0 11382630.0 14457980.0 11462350.0 True False 12981470.133374419 11293635.80920338 12444482.186253369 12180071.823763138 13248027.3255963 12142567.74962515 12466185.903348776 11343146.3132558 11832775.288016243 11360802.496573351 1.1426543272176322 0.9940878571394732 1.095387600480413 1.0721136845250936 1.166117211314269 1.0688125027512445 1.097298004001815 0.998445868298223 1.0415439658937165 1.0 23.43756141075618 -7.257656970168563 24.841857618225273 1.0149961860132117 1.0886897100593536 0.38831179507026137 0.04455235711653616 318.3666218637847 2090961.8690728755 0.021617908849713582 0.01183575249293924 5.525136728723619e-08 7.257656970168563 0.07369352404614182 RASEEEENKAS(ph)EEYIQR ddPTM_KYSE-520_SHP099_60min_R1 1 RASEEEENKASEEYIQR 17 2 Q8IYW5 Q8IYW5 RNF168 E3 ubiquitin-protein ligase RNF168 1 RAS(0.235)EEEENKAS(0.765)EEYIQR 177.87 2.4511e-07 0.0 120320.0 99232.0 115320.0 126520.0 120970.0 104240.0 141350.0 149140.0 181010.0 115230.0 True False 113645.60974802659 94464.74576973141 122753.71171852389 138544.42276037493 130489.65077485262 103589.39949413524 155639.03744306034 148622.66814953755 148143.14689077044 114209.1518475833 0.9950657010367367 0.8271206312415174 1.0748150190480676 1.213076364889462 1.14254986280781 0.9070148741878362 1.3627545159495351 1.3013201284243883 1.297121504662546 1.0 16.801318736311845 -5.005130064207303 0.7257080133886648 1.2133195883355374 0.8502874720107663 0.30259996623084473 0.1434133128607827 1.5250513701184325 1.1610549668411463 0.07105683258375686 0.38903314955768764 9.882570832435214e-06 5.005130064207303 -0.36303211632477117 RASFAEK ddPTM_KYSE-520_SHP099_60min_R1 2 RASFAEK 7 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 158.07 0.0026653000000000002 801440000.0 654370.0 675580.0 618280.0 655870.0 733560.0 742630.0 697440.0 661060.0 797900.0 729480.0 False True 618070.7916457447 643124.1227337464 658135.3180829774 718203.6876054937 791286.9986145395 737994.970705389 767944.0415584592 658766.937152564 653021.4734221637 723017.3747268514 0.8548491547374578 0.8895002322409088 0.9102621058471995 0.9933422248349478 1.0944232134303546 1.0207154025644212 1.0621377416394462 0.911135693525262 0.9031891850024609 1.0 19.463670791227422 -5.144427957136641 2.8884452291530778 1.0022203695063268 0.8752926422350292 0.47006705804339644 0.05584932908644676 0.2610941373929707 4.183171766907364 0.017745206585499492 0.03478655845520898 7.170873196178944e-06 5.144427957136641 -0.12692772727129753 RASGQAFELILS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 12 RASGQAFELILSPR 14 1 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR;RASGQAFELILS(1)PR 160.13 2.8041999999999997e-08 13389453000.0 1862113.0 2163089.0 2197408.0 1995145.0 2322915.0 3222470.0 3447436.0 4509575.0 6223703.0 4366626.0 True False 1758817.8798597625 2059170.9575772176 2339056.4356571105 2184762.9809377827 2505715.194921606 3202357.3694154485 3795936.4746130547 4493932.336867715 5093635.42198514 4327941.090823618 0.40638674209058034 0.4757853478974577 0.5404547766642503 0.5048042325645465 0.5789624078373864 0.739926284164379 0.8770767427175583 1.0383533977382555 1.1769188431850417 1.0 22.045249431576927 -6.673018679073599 1.0448201908554595 1.1040666390000813 0.47460185080603273 0.9562799351210675 0.05404579361486642 0.09672181528236914 0.21252547451648748 0.03711404188491835 0.02281057056033174 2.1231531428876296e-07 6.673018679073599 -0.6294647881940485 down RASHT(ph)LLPSHR ddPTM_KYSE-520_SHP099_60min_R1 2 RASHTLLPSHR 11 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 RAS(0.349)HT(0.651)LLPSHR;RAS(0.205)HT(0.795)LLPSHR 122.97 0.00014527 12862700000.0 1277940.0 1451340.0 1551510.0 2041760.0 1425680.0 1534920.0 1936310.0 2253810.0 2368200.0 1451400.0 True False 1207050.12068977 1381615.4478942477 1651522.8171037724 2235808.256522473 1537872.904990427 1525339.994930334 2132051.1113645015 2245992.0591532094 1938194.5774638029 1438541.7251721132 0.8390789780848056 0.9604277885849613 1.1480534684568688 1.5542185655094374 1.0690499121994042 1.0603376796372284 1.4820919505198322 1.5612978197657001 1.3473328882635707 1.0 20.45617563664807 -4.823123119913043 2.837654793478824 1.310341465233556 0.8745459154612979 0.3940802395744273 0.19448572879751935 0.2624990607861319 4.208491268298397 0.055238736510395244 0.15339690443467027 1.5027158946438317e-05 4.823123119913043 -0.4357955497722582 RASLS(ph)DLTDLEDIEGLTVR ddPTM_KYSE-520_SHP099_60min_R1 1 RASLSDLTDLEDIEGLTVR 19 1 J3KSI3;J3KSU7;K7EN88;Q8WZ73-3;Q8WZ73-2;Q8WZ73 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 1 RAS(0.315)LS(0.685)DLTDLEDIEGLTVR 203.25 1.3951e-13 158570000.0 83338.0 101690.0 89595.0 79200.0 91626.0 97546.0 79802.0 91303.0 129060.0 77147.0 True False 78715.07500981579 96804.65976019813 95370.43705706857 86727.1441876518 98836.44491937374 96937.17923114858 87869.16495246634 90986.29120328029 105625.95733784235 76463.53759945775 1.0294458964500488 1.266023817355851 1.2472668679894416 1.1342287698217461 1.2925957655413873 1.2677569240771829 1.1491642645773883 1.1899304434474076 1.381389884040513 1.0 16.222484327814232 -4.252749048268321 24.06673459139607 1.2208129140807866 1.0294457292098895 0.23607364443768697 0.0991099072039448 923.8791134185138 2558465.61410636 0.022988641149527624 0.25836868688766346 5.587929931324117e-05 4.252749048268321 -0.1913671848708971 RASLS(ph)EIGFGK ddPTM_KYSE-520_SHP099_60min_R1 2 RASLSEIGFGK 11 1 Q00537;F5H6Z0;Q00537-2 Q00537 CDK17 Cyclin-dependent kinase 17 1 RASLS(1)EIGFGK;RAS(0.004)LS(0.996)EIGFGK 202.8 2.4381e-07 1851630000.0 4403200.0 3967900.0 3598100.0 3252600.0 3483200.0 3347800.0 3588700.0 3450100.0 3826000.0 4197900.0 True False 4158945.718438417 3777276.1280606785 3830039.28316355 3561726.1260701474 3757308.0233030207 3326905.138396642 3951480.8183368337 3438132.4083593898 3131294.8456112244 4160709.87191678 0.9995759969974667 0.9078441526422849 0.92052543942438 0.8560380886229183 0.9030449464076865 0.7996003664788058 0.9497131354934976 0.8263331292492863 0.7525866840046411 1.0 21.988398261470376 -1.095721342842435 0.6075137031964272 0.8610810882274029 8.86622951217903 0.23611324392746713 0.06844704114088407 211.0853923099758 1.8111282042519623 0.029214340142116837 2234.9360257356016 0.08021926105974696 1.095721342842435 8.005148423951628 RASLSDLT(ph)DLEDIEGLTVR ddPTM_KYSE-520_SHP099_60min_R1 1 RASLSDLTDLEDIEGLTVR 19 1 J3KSI3;J3KSU7;K7EN88;Q8WZ73-3;Q8WZ73-2;Q8WZ73 J3KSI3 RFFL;hCG_2039718 E3 ubiquitin-protein ligase rififylin 1 RAS(0.099)LS(0.099)DLT(0.802)DLEDIEGLTVR 75.682 0.010773 107610000.0 82242.0 102840.0 91122.0 93514.0 77318.0 86671.0 71327.0 110340.0 146500.0 88139.0 True False 77679.87231463766 97899.4120340129 96995.86992035492 102401.54244399065 83402.48672075763 86130.05414002495 78537.4292444371 109957.25629354967 119899.29296446529 87358.15703110433 0.8892114366261107 1.1206670946498483 1.1103241324770512 1.1722035574483336 0.9547189358752353 0.9859417490842657 0.8990280005160071 1.258694780550359 1.372502546290835 1.0 16.41465480002273 -7.2815543136381935 24.649555220663448 1.2366990428119833 1.0284669285573607 0.32519635692641824 0.12418060790183962 778.1284532936229 953540.2192825741 0.06773637223292304 0.032604321313886825 5.229325632186798e-08 7.2815543136381935 -0.20823211425462262 RASS(ph)ASVPAVGASAEGTR ddPTM_KYSE-520_SHP099_60min_R1 1 RASSASVPAVGASAEGTR 18 1 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 RAS(0.182)S(0.818)ASVPAVGASAEGTR 303.28 1.2048999999999998e-38 846980000.0 350690.0 315000.0 310420.0 293920.0 237010.0 282720.0 275620.0 341660.0 371380.0 293970.0 True False 331236.5266168166 299866.92717536027 330430.16988956113 321854.0684297297 255661.338597568 280955.43961034063 303482.35939197947 340474.8612040432 303946.75372793985 291365.65450519894 1.1368413589423465 1.0291773328074592 1.1340738511225767 1.1046396974149428 0.8774587349072955 0.9642709607879588 1.0415859065728157 1.168548371915153 1.0431797606485442 1.0 18.152471300379613 RASS(ph)LNFLNK ddPTM_KYSE-520_SHP099_60min_R1 3 RASSLNFLNK 10 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 RAS(0.038)S(0.962)LNFLNK;RAS(0.007)S(0.993)LNFLNK;RAS(0.026)S(0.974)LNFLNK 158.83 5.3191999999999995e-05 11054010000.0 10765280.0 9602200.0 9832830.0 8553070.0 9671300.0 9335870.0 8636950.0 8815120.0 11030000.0 8669360.0 True False 10168108.458346372 9140895.898803966 10466669.954884257 9365951.201225733 10432376.28783032 9277601.372364853 9510057.194508947 8784542.406184481 9027230.043672724 8592556.215060016 1.183362459767783 1.0638156643983179 1.2181089879330107 1.0900075561693972 1.21411789771543 1.0797254204871154 1.1067785832859427 1.022343315111279 1.0505872545646966 1.0 23.034655954492944 -7.028727112533341 1.2023159354938397 1.0165583717658733 1.1479114358244138 0.5302597045514875 0.05044714614907063 0.37796008364516553 1.0202416820792681 0.03619674565741924 0.016413911264930935 9.359936178313579e-08 7.028727112533341 0.13135306405854053 RASS(ph)LNVLNVGGK ddPTM_KYSE-520_SHP099_60min_R1 2 RASSLNVLNVGGK 13 1 H0YG16;Q07866-4;Q07866-6;Q07866-7;Q07866-9;G3V5R9;H0YJK1 H0YG16 KLC1 Kinesin light chain 1 1 RAS(0.02)S(0.98)LNVLNVGGK;RAS(0.003)S(0.997)LNVLNVGGK 179.81 4.1883e-08 4193840000.0 4454800.0 4158200.0 4017600.0 3168400.0 3569500.0 3652000.0 3141600.0 3243400.0 5082800.0 3658700.0 True False 4207683.36357637 3958433.8304145494 4276580.924387282 3469523.7833858053 3850399.342323195 3629206.5133593827 3459183.5870613307 3232149.402415254 4159891.646960992 3626286.7644255264 1.160328357055057 1.091594263654888 1.1793278364913797 0.956770384907892 1.06180222151658 1.000805162173742 0.953918929136133 0.8913110331271026 1.1471491134595913 1.0 21.790061586313602 -5.261423138434258 24.99999999989166 0.9976294935157042 1.1385345669772007 0.4799443591274628 0.06761369243814995 1.2490486360163942 1920973.6475060089 0.01830493588579723 0.029235355395435047 5.477430321078716e-06 5.261423138434258 0.1409050734614965 RASS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 3 RASSPFR 7 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 RAS(0.002)S(0.998)PFR;RAS(0.394)S(0.606)PFR;RAS(0.409)S(0.591)PFR 65.278 0.03648 18598900000.0 12688040.0 11633410.0 10141958.0 10552260.0 11573876.0 12487320.0 11120874.0 11927120.0 13856690.0 11851090.0 True False 11984209.12821932 11074523.521495597 10795724.840386538 11555143.617747346 12484674.194853667 12409382.003943827 12245080.47319108 11885747.60453074 11340664.39472886 11746098.562608508 1.0202714598674314 0.9428256933539836 0.9190902649797861 0.9837431174407959 1.062878378578933 1.0564684041939472 1.0424806507388749 1.0118889724258553 0.9654835036741245 1.0 23.485678312998942 -5.546327328805811 9.209234195280269 1.0262094759786677 0.9576727068584121 0.38689708114284793 0.035682863411338604 0.2556618621605218 92.5850030336587 0.011049508310084211 0.014391302732626756 2.8423180379225014e-06 5.546327328805811 -0.06853676912025564 RASS(ph)PFRR ddPTM_KYSE-520_SHP099_60min_R1 1 RASSPFRR 8 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 RAS(0.319)S(0.681)PFRR 60.691 0.025745999999999998 1254500000.0 137690.0 119840.0 48337.0 399290.0 102710.0 135260.0 101590.0 286970.0 104500.0 147410.0 True False 130052.06122179002 114082.70651649273 51452.88036193448 437238.4015490845 110792.69266004072 134415.79216785054 111859.70862285483 285974.5680493014 85525.43423062553 146104.06208324456 0.8901330966944045 0.7808318597705568 0.35216598107052344 2.992650548620357 0.758313568290218 0.9200003767949005 0.7656166914724206 1.9573348199337806 0.5853734181729757 1.0 17.15663676391214 RASSDLS(ph)IASSEEDKLSQNACILESVSEK ddPTM_KYSE-520_SHP099_60min_R1 2 RASSDLSIASSEEDKLSQNACILESVSEK 29 2 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 RAS(0.181)S(0.181)DLS(0.275)IAS(0.181)S(0.181)EEDKLS(0.001)QNACILESVSEK;RAS(0.284)S(0.284)DLS(0.397)IAS(0.029)S(0.005)EEDKLSQNACILESVSEK 170.82 1.9863e-10 875650000.0 592010.0 617060.0 536900.0 557060.0 638520.0 562460.0 571680.0 656910.0 765630.0 591420.0 True False 559170.0251573229 587415.5113740569 571509.4330703734 610002.8149138043 688767.8913181693 558949.4785060564 629470.9934591351 654631.3325339461 626610.8919616629 586180.478917797 0.9539212670296686 1.00210691502136 0.9749717938841819 1.0406399340353127 1.1750099433365107 0.953545023433714 1.0738518529672991 1.1167743657081906 1.0689726364114143 1.0 19.16098539838814 -5.367930749714264 4.496767306263754 1.0684962621801206 0.9797389651078829 0.3134904158508095 0.05746081404892211 0.26752051783374664 8.86385960215248 0.016253959070584977 0.02467919066223703 4.286168599111298e-06 5.367930749714264 -0.08875729707223767 RAT(ph)ISSPLELEGTVSR ddPTM_KYSE-520_SHP099_60min_R1 1 RATISSPLELEGTVSR 16 1 Q96GS4 Q96GS4 C17orf59 Uncharacterized protein C17orf59 1 RAT(0.949)IS(0.05)S(0.002)PLELEGTVSR 94.463 0.00091127 0.0 21885.0 25058.0 24236.0 21684.0 19976.0 26094.0 32289.0 28157.0 30036.0 27254.0 True False 20670.995423334098 23854.17606717519 25798.29133897106 23744.84084046767 21547.9975521076 25931.13766692218 35553.08723027223 28059.329938893196 24582.219545943226 27012.550763291158 0.7652367080944111 0.8830775100140467 0.9550483242045316 0.8790299386585825 0.7977031766059783 0.9599662724988353 1.3161691963791615 1.0387515856897367 0.9100295548300962 1.0 14.721342257819039 -6.526980878918198 24.996630869472344 1.0792670129684712 0.8657555932304759 0.456054520050305 0.10764448312133008 111.04208893859372 676630.5440684003 0.04188579527915742 0.03258597079992842 2.9717968708864226e-07 6.526980878918198 -0.21351141973799526 RAT(ph)PEPGDEGEPGR ddPTM_KYSE-520_SHP099_60min_R1 1 RATPEPGDEGEPGR 14 1 M0QYC1;M0QZR4;M0QZH8;M0QYS3 M0QYC1 ARHGEF1 1 RAT(1)PEPGDEGEPGR 73.722 0.02783 347160000.0 233650.0 255000.0 249060.0 186920.0 183050.0 251260.0 188650.0 215420.0 250490.0 215260.0 True False 220688.96873027223 242749.4172371964 265114.8061100895 204684.82060045263 197454.99358797024 249691.79313983547 207720.5830465747 214672.75829940604 205007.33033903717 213352.96386974573 1.0343843587989956 1.1377831966065282 1.2426113108601808 0.959371816955001 0.9254851210247008 1.1703225894357623 0.9736006441109969 1.0061859671678433 0.9608834422576681 1.0 17.702882626834207 -5.278324002331202 24.995390903125234 1.0026309585336268 1.1382119893393892 0.4015692869222167 0.0776067536916435 820.3877412373353 1214470.8794659136 0.022294529567906153 0.03316342037935053 5.268366719943817e-06 5.278324002331202 0.13558103080576234 RAT(ph)SLPSIPNPFPELCS(ph)PPS(ph)QSPILGGPSSAR ddPTM_KYSE-520_SHP099_60min_R1 1 RATSLPSIPNPFPELCSPPSQSPILGGPSSAR 32 1 J3QL76;Q14451-2;Q14451;Q14451-3 J3QL76 GRB7 Growth factor receptor-bound protein 7 3 RAT(0.516)S(0.468)LPS(0.016)IPNPFPELCS(0.998)PPS(0.598)QS(0.404)PILGGPSSAR 86.8 0.00187 40248000.0 21266.0 22403.0 23154.0 20122.0 25367.0 21351.0 18189.0 21396.0 30621.0 20596.0 True False 20086.332587280016 21326.726252411423 24646.54388770987 22034.388830100088 27363.238581513488 21217.740489248674 20027.72162753327 21321.78226986393 25060.998292593144 20413.53546344554 0.9839712784318304 1.0447345728328703 1.2073628270734567 1.0794009136514842 1.340445834603847 1.0393956758369083 0.981100097207407 1.0444923814419498 1.2276657484182396 1.0 14.317238446969721 RATASEQPLAQEPPAS(ph)GGSPATTK ddPTM_KYSE-520_SHP099_60min_R1 1 RATASEQPLAQEPPASGGSPATTK 24 1 E9PDI4;O00515 E9PDI4 LAD1 Ladinin-1 1 RATASEQPLAQEPPAS(0.637)GGS(0.356)PAT(0.005)T(0.002)K 102.03 4.7769e-06 0.0 420630.0 502820.0 390660.0 352000.0 297770.0 378550.0 322140.0 324380.0 451080.0 355700.0 True False 397296.81539488304 478663.77245179325 415842.56867810054 385453.9741673412 321202.80492045823 376187.3290340073 354705.0549834274 323254.8014908608 369175.2428014403 352548.7747304124 1.1269272335400644 1.357723545679087 1.1795320207709918 1.0933351689056097 0.9110875655888356 1.0670504508820684 1.0061162608057959 0.9169080270894371 1.04716075976648 1.0 18.42746334100884 -5.345320257728092 2.549635842684209 0.9923001327856771 1.2432678926556875 0.6714464207764442 0.07176763490962852 0.15222613284338976 1.9311157501520397 0.02041443586948185 0.03461208090324849 4.515228592884051e-06 5.345320257728092 0.2509677598700104 RATASEQPLAQEPPASGGS(ph)PATTK ddPTM_KYSE-520_SHP099_60min_R1 1 RATASEQPLAQEPPASGGSPATTK 24 1 E9PDI4;O00515 E9PDI4 LAD1 Ladinin-1 1 RATASEQPLAQEPPAS(0.145)GGS(0.852)PAT(0.001)T(0.002)K 134.11 2.5519e-11 0.0 495570.0 429600.0 331080.0 301180.0 277930.0 365420.0 265450.0 339630.0 457700.0 294200.0 True False 468079.74420569657 408961.3711572532 352421.9465467301 329804.05664693133 299801.5097946165 363139.27823433327 292284.2765423445 338451.90280023793 374593.2176780599 291593.6168841368 1.6052468816273355 1.402504538773055 1.208606519966324 1.1310400418606463 1.0281483970677625 1.2453608625411878 1.0023685691943047 1.1606972279325305 1.2846413501119351 1.0 18.15359961320182 -4.550743047592023 1.6035018518250184 1.123995490090073 1.6565105908328752 0.751285194305079 0.09045143050198493 0.2871872316865884 1.0680812365281347 0.025377039861793505 0.20242048431018764 2.8135649972355757e-05 4.550743047592023 0.5325151007428022 RATS(ph)LPSIPNPFPELCS(ph)PPS(ph)QSPILGGPSSAR ddPTM_KYSE-520_SHP099_60min_R1 1 RATSLPSIPNPFPELCSPPSQSPILGGPSSAR 32 1 J3QL76;Q14451-2;Q14451;Q14451-3 J3QL76 GRB7 Growth factor receptor-bound protein 7 3 RAT(0.476)S(0.517)LPS(0.007)IPNPFPELCS(0.647)PPS(0.7)QS(0.647)PILGGPS(0.003)S(0.003)AR 61.918 0.055628 41480000.0 17791.0 20311.0 24112.0 24070.0 17590.0 14021.0 15616.0 13259.0 31831.0 18232.0 True False 16804.09776452077 19335.22907256746 25666.29810056405 26357.60556309063 18974.232926590532 13933.489738174121 17194.617677473176 13213.00762367386 26051.292794210924 18070.478664281356 0.9299199028820553 1.06998986755044 1.420344119123796 1.4586002979096429 1.050012746153513 0.7710636777826738 0.9515308363945315 0.7311930065134956 1.4416492932035432 1.0 14.14134710143756 -5.989008306190148 24.62893957419816 0.9550061334874205 1.2272194111380257 0.19391488449523975 0.22950547444800698 278.8268811498643 624758.6121863885 0.0727054754961904 0.0823635833786255 1.0256323101180875e-06 5.989008306190148 0.2722132776506052 RAVS(ph)MDNSNK ddPTM_KYSE-520_SHP099_60min_R1 1 RAVSMDNSNK 10 1 O43524-2;O43524 O43524-2 FOXO3 Forkhead box protein O3 1 RAVS(0.862)MDNS(0.138)NK 107.99 0.00087142 0.0 206900.0 195110.0 187750.0 213640.0 234770.0 255840.0 196300.0 213560.0 261940.0 224950.0 True False 195422.84455507566 185736.62273391933 199852.66541062112 233944.28136679198 253245.06334142477 254243.2076609709 216143.9197033799 212819.2102052789 214378.29897004805 222957.1180084515 0.8765041739894928 0.8330598475303161 0.8963726621324798 1.0492792670468767 1.1358465053886513 1.1403233497633094 0.969441664989528 0.9545297862937558 0.9615225604141588 1.0 17.766406733526033 -5.166805163925318 4.101524649212538 1.0346907746302287 0.8574546438826289 0.5801994192022178 0.0633375665118512 0.18249212136031187 5.474772952242506 0.020313185514080317 0.03675076660727675 6.810748384825859e-06 5.166805163925318 -0.1772361307475998 RAVS(ph)PSNPK ddPTM_KYSE-520_SHP099_60min_R1 6 RAVSPSNPK 9 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 RAVS(0.985)PS(0.015)NPK;RAVS(0.955)PS(0.045)NPK;RAVS(0.913)PS(0.087)NPK;RAVS(0.68)PS(0.32)NPK;RAVS(0.916)PS(0.084)NPK;RAVS(0.997)PS(0.003)NPK 156.14 0.00020009 9733820000.0 7554190.0 7915390.0 7059890.0 6509070.0 6892000.0 6143170.0 5705750.0 6269910.0 7938730.0 6197170.0 True False 7135144.021795586 7535122.783157394 7514981.805623391 7127690.055776753 7434361.189884148 6104828.197336788 6282542.892753745 6248161.145618 6497256.751097551 6142267.895125297 1.1616465031520797 1.2267655712538217 1.2234864929267453 1.1604329504145399 1.2103609475881536 0.993904580778995 1.0228376554105976 1.0172400898659506 1.0577944274058746 1.0 22.55034000618049 -6.258866325803781 24.99711084566022 1.0197129966955398 1.1977090287389518 0.9202241605802466 0.026228987150916747 59.358867082415294 576669.8974737028 0.008805677321558403 0.008427545588669023 5.509772590216668e-07 6.258866325803781 0.17799603204341197 RAVSEGCAS(ph)EDEVEGEA ddPTM_KYSE-520_SHP099_60min_R1 4 RAVSEGCASEDEVEGEA 17 1 Q9BYX2-2;Q9BYX2;Q9BYX2-4;Q9BYX2-5;Q9BYX2-6 Q9BYX2-2 TBC1D2 TBC1 domain family member 2A 1 RAVSEGCAS(1)EDEVEGEA;RAVSEGCAS(1)EDEVEGEA;RAVSEGCAS(1)EDEVEGEA;RAVSEGCAS(1)EDEVEGEA 174.18 8.404200000000001e-07 3456740000.0 2315770.0 2084490.0 1805710.0 1493070.0 1719850.0 1648480.0 1493360.0 1605530.0 2059940.0 1559590.0 True False 2187309.621726953 1984347.9715167207 1922108.9558381508 1634970.9238921343 1855192.410392084 1638191.2248473936 1644323.4025890986 1599960.7911635188 1685906.822861577 1545773.2459426585 1.4150261867115357 1.2837251367399662 1.2434611356376475 1.0577042449037086 1.2001711216451625 1.0597875394384744 1.063754601074326 1.035055300227955 1.0906559725281446 1.0 20.55989727089793 -1.0000000000378129 0.34231898528881277 1.0272248626905105 5.533772354392884 0.8692737094382672 0.04608247271345621 18.842648151727605 0.2669540193108149 0.03826695959542012 54.392970841372296 0.09999999999129326 1.0000000000378129 4.506547491702373 RAVVVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 RAVVVSPK 8 1 G3V5E1;O75909-1;O75909 G3V5E1 CCNK Cyclin-K 1 RAVVVS(1)PK;RAVVVS(1)PK;RAVVVS(1)PK;RAVVVS(1)PK;RAVVVS(1)PK 120.86 0.00099211 10223680000.0 15403100.0 13805700.0 11914300.0 11405080.0 13192250.0 13028160.0 12324930.0 11936330.0 14312600.0 12493580.0 True False 14548659.337681402 13142453.449221825 12682314.841554025 12489015.374137662 14230405.021365205 12946846.420889419 13570854.204125209 11894925.657190353 11713792.631284684 12382896.601058159 1.1748995252401746 1.0613391900646865 1.0241799839037886 1.0085697859312202 1.1491984048505395 1.045542641435209 1.0959353567537287 0.960593150408273 0.9459654722695255 1.0 23.561845492752358 -7.266509689169375 24.741760525109758 0.9649594715700587 1.0756855650856345 0.5020517337125407 0.0505341919625222 320.66662168656063 1564753.6879794516 0.02684080547479499 0.013537740884279172 5.4136516981686815e-08 7.266509689169375 0.11072609351557583 RAVVVS(ph)PKEENK ddPTM_KYSE-520_SHP099_60min_R1 2 RAVVVSPKEENK 12 2 G3V5E1;O75909-1;O75909 G3V5E1 CCNK Cyclin-K 1 RAVVVS(1)PKEENK;RAVVVS(1)PKEENK 137.79 2.492e-05 2555800000.0 3442900.0 3311700.0 3266800.0 2300540.0 2983600.0 2890400.0 2076280.0 2104010.0 4254300.0 2671300.0 True False 3251915.473749009 3152600.961036958 3477383.155064812 2519182.629917426 3218392.345638175 2872359.9414605624 2286170.6449400624 2096711.6803896257 3481826.3621755997 2647634.360239953 1.2282343523651396 1.1907236922062154 1.3133925164612457 0.951484339283584 1.215572812458324 1.0848778761128643 0.8634767244570994 0.7919188963084777 1.3150706964915069 1.0 21.336272468247486 -5.709752642521867 0.9231946744635925 0.9899010515906547 1.2384515867155899 0.23698224523638511 0.15448066823141002 0.8362943907501755 1.5233911114905816 0.07478425007078379 0.1280475931261914 1.950955472774818e-06 5.709752642521867 0.2485505351249352 RCAT(ph)PVIIDEILPSKK ddPTM_KYSE-520_SHP099_60min_R1 4 RCATPVIIDEILPSKK 16 2 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 RCAT(1)PVIIDEILPSKK;RCAT(1)PVIIDEILPSKK;RCAT(1)PVIIDEILPSKK;RCAT(1)PVIIDEILPSKK 112.85 0.00048022 1359342000.0 2273500.0 2384080.0 2216170.0 1720850.0 1788430.0 1920830.0 1726620.0 1839060.0 2648940.0 2016760.0 True False 2147384.42289011 2269545.2182229655 2359027.8641973734 1884399.066607583 1929169.2662252581 1908841.387474291 1901163.5997873177 1832680.7300998324 2167959.270343285 1998893.075415538 1.0742867886736278 1.135401010757498 1.1801671100926543 0.9427212939920994 0.9651187899704013 0.9549492221225857 0.9511082024195296 0.916847805738107 1.0845799092543262 1.0 20.93076987097475 -5.266678828731386 24.99999501369285 0.9680833167010666 1.1304965764932833 0.6806586642428071 0.048967999998864545 224.99759168382172 1073575.3369616754 0.01338683108176348 0.02056743384121984 5.411543717450025e-06 5.266678828731386 0.16241325979221666 RCPS(ph)QSSSRPAAMISQPPTPPTGQPVREDAK ddPTM_KYSE-520_SHP099_60min_R1 1 RCPSQSSSRPAAMISQPPTPPTGQPVREDAK 31 3 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 RCPS(0.87)QS(0.042)S(0.042)S(0.042)RPAAMIS(0.003)QPPTPPTGQPVREDAK 59.158 0.054377999999999996 1592900000.0 168090.0 145930.0 169800.0 140320.0 140260.0 174280.0 112290.0 131080.0 222760.0 180550.0 True False 158765.71262089245 138919.3037546042 180745.5796896057 153655.9706112535 151297.66402976625 173192.25387411658 123641.36904479124 130625.314074302 182312.39932262318 178950.46746577433 0.887204793981651 0.7763003121585786 1.010031335761527 0.8586508478422465 0.8454723039977703 0.9678223048355039 0.6909250967362721 0.7299523489609498 1.0187869409030286 1.0 17.449200786895627 -5.4735195960586855 24.991635993419305 0.8568950733785363 0.8887992620002638 0.0 0.11407873918328182 2413.578707047041 1222047.0168989236 0.03228321981204511 0.047883045457393775 3.3610920292236918e-06 5.4735195960586855 0.0319041886217275 RCPT(ph)PEIQK ddPTM_KYSE-520_SHP099_60min_R1 8 RCPTPEIQK 9 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RCPT(1)PEIQK;RCPT(1)PEIQK;RCPT(1)PEIQK;RCPT(1)PEIQK;RCPT(1)PEIQK;RCPT(1)PEIQK;RCPT(1)PEIQK;RCPT(1)PEIQK 167.3 0.00018163 15565940000.0 12114280.0 11369170.0 9607000.0 8891430.0 9499120.0 11316620.0 10031990.0 11283610.0 12423810.0 11422400.0 True False 11442276.739181545 10822978.007727927 10226282.591743473 9736468.833894098 10246646.701400496 11245988.776892941 11046121.451987334 11244469.790524365 10167959.282763513 11321206.422492715 1.010694117938552 0.9559915793271891 0.9032855872520907 0.8600204316167139 0.9050843451668448 0.9933560397370432 0.9757017971195324 0.9932218679613605 0.8981339005145285 1.0 23.432524368583422 -6.259295705301675 24.94635077828968 0.9718852800562708 0.9235847655912298 0.19594847470912935 0.04538006337771162 328.90360828337174 3827531.965094828 0.016412318409473707 0.015659635707834785 5.50432786465038e-07 6.259295705301675 -0.04830051446504102 RCPT(ph)PEIQKK ddPTM_KYSE-520_SHP099_60min_R1 3 RCPTPEIQKK 10 2 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RCPT(1)PEIQKK;RCPT(1)PEIQKK;RCPT(1)PEIQKK 126.1 0.00092827 8918820000.0 5776900.0 5083900.0 5071400.0 4344900.0 4738000.0 4687200.0 3971810.0 3896930.0 5955600.0 4280400.0 True False 5456443.841035357 4839661.81291053 5398310.558526899 4757837.989658184 5110853.644467649 4657945.446171439 4373319.315930118 3883412.4593803026 4874213.168458493 4242478.9861008115 1.2861451662840833 1.1407627070790936 1.2724424979387798 1.1214759119009874 1.2046856710927272 1.0979301161966333 1.0308405369261615 0.9153639822620498 1.148906850081607 1.0 22.016476083134958 -6.467835115753459 2.026946840828245 1.014972873772456 1.2039360665774634 0.5916985698516523 0.07114325768619321 0.22383269579192874 1.8317914208232777 0.029377678376866567 0.023395322834224172 3.4053745361369493e-07 6.467835115753459 0.1889631928050075 RCS(ph)DNTEVEVSNLENK ddPTM_KYSE-520_SHP099_60min_R1 1 RCSDNTEVEVSNLENK 16 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 RCS(0.999)DNT(0.001)EVEVSNLENK 247.74 1.5532e-23 484380000.0 424650.0 416000.0 374300.0 455760.0 451200.0 419580.0 468290.0 427710.0 509690.0 396660.0 True False 401093.81798121234 396014.7355712699 398427.9769011747 499075.2933707599 486706.8730231749 416961.2455847015 515629.32326997427 426226.3738382649 417143.14423930587 393145.90099681006 1.0202162020874452 1.0072971244700402 1.0134354088163506 1.2694404090322928 1.237980281084309 1.0605763522588136 1.3115469904750654 1.0841429931167545 1.0610390269405112 1.0 18.584705287129264 -5.220626690974407 22.44457100430115 1.1570176795034584 1.0130140107068646 0.28323032119083635 0.09572667327197129 186.6381831902095 102638.55544017034 0.02566888185174114 0.04445816486686175 6.016907140364927e-06 5.220626690974407 -0.14400366879659376 RCS(ph)DNTEVEVSNLENKQPVESTSAK ddPTM_KYSE-520_SHP099_60min_R1 2 RCSDNTEVEVSNLENKQPVESTSAK 25 2 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 RCS(0.499)DNT(0.499)EVEVS(0.002)NLENKQPVESTSAK;RCS(0.777)DNT(0.223)EVEVSNLENKQPVESTSAK 247.52 4.298399999999999e-29 804470000.0 667220.0 740860.0 714340.0 602920.0 668290.0 708900.0 608250.0 687550.0 885700.0 689220.0 True False 630207.9765299049 705267.9735464683 760387.499384411 660221.3355254922 720880.62095004 704475.4921468974 669737.8459479415 685165.0495253758 724879.2066800485 683114.0470050467 0.9225516285207483 1.0324307875654881 1.113119401830707 0.9664877166851974 1.0552858986146925 1.0312706864036905 0.9804187878791982 1.0030024306033836 1.0611393659054609 1.0 19.3817669333521 -4.25975962402762 24.458086678194867 1.0274703189829175 0.9225515819111708 0.3721345926590214 0.04070398795649516 116.54000990414809 1696674.139483839 0.010015528573729447 0.0616022643256965 5.498451213001696e-05 4.25975962402762 -0.1049187370717467 RCS(ph)DPSLNEK ddPTM_KYSE-520_SHP099_60min_R1 2 RCSDPSLNEK 10 1 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 RCS(0.993)DPS(0.007)LNEK;RCS(1)DPSLNEK 116.74 0.00037542 1065580000.0 1416630.0 1182380.0 1077780.0 1047290.0 1201450.0 1081390.0 1126570.0 1071920.0 1378580.0 1127970.0 True False 1338046.7099181088 1125576.690011438 1147255.4233089709 1146824.1267207798 1295997.2796846058 1074640.643888746 1240454.6898636636 1068201.7597080094 1128264.623173739 1117977.0633473804 1.1968462983594752 1.0067976588368488 1.026188694671362 1.0258029116331129 1.1592342295504774 0.9612367544206326 1.1095528973998519 0.955477348085893 1.009201941760376 1.0 20.09245915917394 -4.256157701750826 24.38745060566383 1.031186565587809 1.1968463979396393 0.4198802773461622 0.05938607345771297 395.83895255585986 1827652.2961517079 0.014229554715900261 0.1164555784553138 5.5442435288714784e-05 4.256157701750826 0.16565983235183035 RCS(ph)SSLGVPLTEVVEPLDFEDVLLSRPPDAEPGPLR ddPTM_KYSE-520_SHP099_60min_R1 1 RCSSSLGVPLTEVVEPLDFEDVLLSRPPDAEPGPLR 36 2 Q96HP0 Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 RCS(0.391)S(0.304)S(0.304)LGVPLTEVVEPLDFEDVLLSRPPDAEPGPLR 161.04 2.7963e-10 214910000.0 30275.0 38278.0 23841.0 26998.0 25158.0 30011.0 23333.0 35035.0 42874.0 26115.0 True False 28595.585398283743 36439.06742355065 25377.829006948712 29563.88180275533 27137.791470560813 29823.690216984804 25691.727348135355 34913.471762230474 35089.16236558694 25883.64141716257 1.1047744379321751 1.4078029762608726 0.9804582206165756 1.1421840275979298 1.0484533854099316 1.1522215802761708 0.9925855073506017 1.3488624417073143 1.3556501498402191 1.0 14.659752975431884 -7.273381501455594 24.99310858381249 1.2641922134489785 1.1237138658718229 0.1086354103446604 0.14523473207967785 1451.6396198186908 3038051.8548173998 0.07628338422672949 0.03711169239912616 5.3286659872955325e-08 7.273381501455594 -0.1404783475771556 RCS(ph)VTSMESTVSSGTQTTVQDDPEQFEVIK ddPTM_KYSE-520_SHP099_60min_R1 2 RCSVTSMESTVSSGTQTTVQDDPEQFEVIK 30 1 Q9Y6D5 Q9Y6D5 ARFGEF2 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 1 RCS(0.954)VT(0.01)S(0.001)MES(0.004)T(0.004)VS(0.004)S(0.007)GT(0.015)QT(0.001)TVQDDPEQFEVIK;RCS(0.997)VT(0.003)SMESTVSSGTQTTVQDDPEQFEVIK 169.94 2.2764e-10 1255120000.0 991200.0 1192660.0 745400.0 680950.0 756730.0 974920.0 809650.0 899120.0 1160620.0 975210.0 True False 936216.160091787 1135362.8233808423 793449.6766821687 745667.2832649163 816280.3457952744 968835.1626517877 891497.3234225261 896001.1625761846 949880.6648492686 966570.3981018994 0.9685959366542566 1.1746302448434265 0.8208917614695255 0.7714567761740053 0.844512047335862 1.0023430932235622 0.9223304636405192 0.9269900716344148 0.9827330391191317 1.0 19.882515286328932 -9.482044233397481 23.092748059332127 1.0 0.9325471988413285 0.03201919197148795 0.10658156984579341 0.0 0.0 0.11110890979792677 0.026947868884945717 3.2957614275495195e-10 9.482044233397481 -0.06745280115867147 RCSDNT(ph)EVEVSNLENKQPVESTSAK ddPTM_KYSE-520_SHP099_60min_R1 1 RCSDNTEVEVSNLENKQPVESTSAK 25 2 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 RCS(0.001)DNT(0.838)EVEVS(0.161)NLENKQPVESTSAK 228.47 1.7780999999999997e-21 1016000000.0 406200.0 486210.0 434670.0 360090.0 378820.0 335030.0 304440.0 371570.0 564520.0 398750.0 True False 383667.27626037487 462851.74178391165 462689.52369659016 394312.8453349935 408630.9788090413 332938.95349693135 335215.76624807465 370281.11039509036 462017.39839112613 395217.3852228059 0.97077530140553 1.1711320379364802 1.1707215851239603 0.9977112851771375 1.0339397862740107 0.8424198072896901 0.8481807197299658 0.9369049142065003 1.1690209380102583 1.0 18.592286885486583 -5.598916010995682 2.2784971353074344 0.952706360822443 1.1080440330118064 0.23137033813657282 0.10332240979263985 0.4000915544337618 4.2125086749834475 0.03449880150946699 0.04940764324806967 2.518163872989645e-06 5.598916010995682 0.15533767218936345 RDAFVNS(ph)QEWTLSR ddPTM_KYSE-520_SHP099_60min_R1 1 RDAFVNSQEWTLSR 14 1 E7EUN2 E7EUN2 AGAP1 1 RDAFVNS(1)QEWTLSR 143.33 0.00018153 0.0 54649.0 67835.0 62939.0 59844.0 55805.0 56396.0 41293.0 48916.0 73741.0 53928.0 True False 51617.511029919355 64576.10477758919 66996.14864596058 65531.555767245285 60196.53601298379 56044.011644965954 45467.29942084401 48746.32181308023 60351.493259335475 53450.23987534915 0.9657114944721691 1.208153694505143 1.253430270887497 1.2260292174566638 1.1262163865563115 1.0485268499386666 0.8506472473627417 0.9119944443048545 1.1291154801190917 1.0 15.705908802073328 -6.340735130008438 2.9110706778522153 0.9650447887945691 1.1710893147371935 0.42160238542253614 0.10003497858132156 0.24897976729445218 4.126827888041759 0.03901694420173073 0.034401003320454294 4.56315131173458e-07 6.340735130008438 0.20604452594262435 RDAGDKDKEQELSEEDK ddPTM_KYSE-520_SHP099_60min_R1 1 RDAGDKDKEQELSEEDK 17 3 Q13200;C9JPC0 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 178.06 5.4099e-09 638810000.0 466870.0 539270.0 363510.0 323850.0 454350.0 520660.0 391830.0 505940.0 467640.0 405980.0 False True 440971.7904177287 513362.65973922744 386942.43623656395 354628.60663094744 490104.7601021265 517410.36781097914 431440.0002922846 504185.01222728344 382728.3642450686 402383.33304766077 1.09589974087097 1.2758049789264547 0.9616264006410328 0.881320316984757 1.2180046235763833 1.2858643122519537 1.0722114085206957 1.2529967591067313 0.951153620967039 1.0 18.618211023547783 -7.789292044319539 24.996909834200412 0.9755765457280102 1.1275339560464774 0.18903340449156036 0.1282105566049479 452.1765241315428 405802.5628141109 0.12965996620706705 0.033508723080521455 1.6244560117316204e-08 7.789292044319539 0.1519574103184672 RDDAYWPEAK ddPTM_KYSE-520_SHP099_60min_R1 2 RDDAYWPEAK 10 1 Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0 Q15424-2 SAFB Scaffold attachment factor B1 0 ; 140.24 0.00059504 1554330000.0 2849000.0 2702200.0 1622460.0 1685740.0 2575200.0 2596000.0 2024120.0 2256600.0 2198610.0 2169230.0 False True 2690960.290659307 2572382.255915111 1727046.367627786 1845952.2227637884 2777853.589116315 2579797.4010626916 2228737.803107516 2248772.381294402 1799397.846447804 2150012.3098354046 1.2516022714610946 1.1964500129359916 0.8032727811497977 0.8585775134027518 1.2920175277177715 1.199898897909189 1.0366162988518601 1.0459346539585896 0.8369244390910292 1.0 21.0359134892727 -7.605218202570969 5.856223280106403 0.9199900774130745 1.0841372561717781 0.15923550067603964 0.15579797337186568 0.43403655713617084 23.658823512441234 0.11893119667177098 0.04330061521820395 2.4818858181248232e-08 7.605218202570969 0.16414717875870366 RDDGLSAAAR ddPTM_KYSE-520_SHP099_60min_R1 1 RDDGLSAAAR 10 1 F8WBN3;B9A031;C9JQZ0;B8ZZY7;F8WBV6;P84101-4;P84101;P84101-3;P84101-2 F8WBN3 SERF2 Small EDRK-rich factor 2 0 126.12 0.0047381 0.0 116270.0 126210.0 88909.0 87926.0 97780.0 115060.0 102700.0 99991.0 125740.0 110900.0 False True 109820.27132150142 120146.6821549279 94640.21639942979 96282.4606040842 105474.72970790345 114341.86786066016 113081.91825541065 99644.15455907492 102908.78564745311 109917.51227889454 0.9991153278910971 1.0930622397100729 0.8610112659691428 0.8759519625934217 0.959580757616508 1.040251598585489 1.028788915532286 0.9065357511571681 0.9362364878340939 1.0 16.7460617321087 -4.744299635036761 24.99904103167593 0.9512920974642535 1.0460887705657262 0.28182531807737676 0.06068799032873277 343.4443543836916 500920.26721871994 0.016808882985675507 0.044231753527950106 1.8017742045388965e-05 4.744299635036761 0.09479667310147277 RDDGSWEVIEGYR ddPTM_KYSE-520_SHP099_60min_R1 4 RDDGSWEVIEGYR 13 1 P00367;P49448 P00367 GLUD1;GLUD2 Glutamate dehydrogenase 1, mitochondrial;Glutamate dehydrogenase 2, mitochondrial 0 ;;; 277.31 2.2103e-22 1619900000.0 692060.0 731470.0 425573.0 427093.0 735710.0 766750.0 569160.0 532470.0 664720.0 642320.0 False True 653670.0522125936 696329.0832411456 453006.11652087525 467683.79030980763 793606.1913827141 761964.4288385287 626696.247266305 530622.9858494325 544023.604227573 636629.5445173989 1.0267667560231002 1.09377437669658 0.7115694212154093 0.7346247033890617 1.2465745553551277 1.1968725539059621 0.9843970526711513 0.8334878429992982 0.854537162016214 1.0 19.280094585133057 -7.171543110442364 6.954194795295021 0.8835156088254702 0.9993464682832098 0.0729817488412019 0.16724768486064182 0.7414699950598508 48.95924525886859 0.08838543291727669 0.05069596401592035 6.736850184967874e-08 7.171543110442364 0.11583085945773963 RDDGTGQLLLPLSDAR ddPTM_KYSE-520_SHP099_60min_R1 5 RDDGTGQLLLPLSDAR 16 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;;; 165.9 1.2393e-07 1216790000.0 1307110.0 1356920.0 924941.0 801485.0 1304790.0 1306030.0 934460.0 1004761.0 1038629.0 1139130.0 False True 1234602.002640815 1291731.5264215567 984564.1768179242 877657.8934247472 1407469.5497604366 1297878.5823227698 1028924.3362507412 1001275.7186039803 850040.1553064155 1129038.1944297287 1.093498881376999 1.144099050673838 0.872037971501241 0.7773500469291454 1.246609332354201 1.1495435572738277 0.9113281918424784 0.8868395449719214 0.7528887503542485 1.0 20.106662861442445 -6.93332756933279 7.539918725198375 0.8715209249735066 1.040284006498631 0.2376134836403515 0.14014387658214453 0.36972615053871566 35.540569730242716 0.06357231612967712 0.042700911813623114 1.1659298754170568e-07 6.93332756933279 0.16876308152512431 RDEDMLYS(ph)PELAQR ddPTM_KYSE-520_SHP099_60min_R1 4 RDEDMLYSPELAQR 14 1 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 RDEDMLYS(1)PELAQR;RDEDMLYS(1)PELAQR;RDEDMLY(0.003)S(0.997)PELAQR;RDEDMLYS(1)PELAQR 153.36 1.1274e-06 1738950000.0 824280.0 641110.0 635850.0 696760.0 684060.0 639040.0 641670.0 773570.0 735590.0 643070.0 True False 778555.5452385567 610310.1132742714 676837.9083959708 762979.8609114672 737891.6302310128 635051.5143201482 706536.2656957102 770886.6662225951 602025.3987148884 637372.90010089 1.2215071351720772 0.9575401043528289 1.0619182401524037 1.1970698170422605 1.1577078820172801 0.9963578844027188 1.1085131884080297 1.2094751221781963 0.9445418821848145 1.0 19.28177815417196 -7.783191984303289 24.98078406906418 0.9722708023314668 1.1069791907052446 0.3041180451643869 0.08511849517860486 354.05929630223756 406591.78372051724 0.08179141122554603 0.021195359738491078 1.6474339655535045e-08 7.783191984303289 0.13470838837377785 RDEFEFLEK ddPTM_KYSE-520_SHP099_60min_R1 2 RDEFEFLEK 9 1 A0A3B3IUA7;Q14258 A0A3B3IUA7 TRIM25 E3 ubiquitin/ISG15 ligase TRIM25 0 ; 175.49 0.00012928 1386360000.0 1605340.0 1494630.0 1057740.0 1015850.0 1645100.0 1618660.0 1214820.0 1241920.0 1338480.0 1384500.0 False True 1516288.5900340483 1422825.731314632 1125923.6128438374 1112396.0785735596 1774560.0106614036 1608557.342528558 1337625.8611006618 1237612.0693863072 1095445.7723350003 1372234.4071247021 1.1049778246059205 1.0368678440995631 0.8205038490493984 0.8106458144453671 1.2931901440802016 1.172217613970949 0.9747794211802654 0.9018955237972246 0.7982934742398217 1.0 20.388095515201282 -7.14491980210784 3.882150361488316 0.8875968799066851 1.0330908600663007 0.1534989435704941 0.14438369519950936 0.49357472587987944 12.97906283254199 0.08105254804427658 0.044313024598465506 7.162756672356838e-08 7.14491980210784 0.14549398015961557 RDEHLLK ddPTM_KYSE-520_SHP099_60min_R1 2 RDEHLLK 7 1 O00629;O00505 O00629;O00505 KPNA4;KPNA3 Importin subunit alpha-3;Importin subunit alpha-4 0 ; 105.57 0.0096209 884050000.0 1067090.0 989040.0 822820.0 718230.0 1104590.0 991370.0 843560.0 948270.0 952280.0 805110.0 False True 1007896.3905088223 941525.0338206938 875860.2937585483 786490.363256276 1191514.948742617 985182.4920999703 928835.2771522319 944980.6726978825 779369.9570252629 797977.351766101 1.2630639056085036 1.1798894188373767 1.0976004416918288 0.9856048690048638 1.493168880176273 1.2345995659144247 1.1639870167950421 1.1842199162751055 0.9766818009312472 1.0 19.60598827482126 -7.742442942153359 6.478145722378492 0.9867912995892254 1.1993019407099446 0.3244300943770746 0.1223696797474508 0.17866816777341002 28.530692179789952 0.09674549791615328 0.032533687966170816 1.809493626900507e-08 7.742442942153359 0.21251064112071916 RDELTLEGIK ddPTM_KYSE-520_SHP099_60min_R1 2 RDELTLEGIK 10 1 I3L3H2;P38919 I3L3H2 EIF4A3 Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 0 ; 166.11 0.0013135 0.0 753530.0 661600.0 419390.0 436460.0 581620.0 619180.0 404440.0 511340.0 579020.0 580120.0 False True 711730.1887751855 629815.7429181539 446424.55044772517 477941.0271735165 627390.1850348833 615315.4679468414 445324.74215402495 509566.2808876528 473884.56390638096 574980.58812653 1.2378334216364228 1.0953687062206643 0.7764167341758764 0.8312298485254965 1.0911502022687765 1.0701499853268703 0.7745039595250247 0.8862321466329535 0.824174891626251 1.0 19.133153724604558 -6.7561270093956916 24.995386307513105 0.8617470941945629 1.004573279850549 0.2115873238378232 0.1361211930268369 234.92276106105615 1105347.6006113994 0.057379991347144145 0.04310429195698845 1.753367654586874e-07 6.7561270093956916 0.14282618565598604 RDESLK ddPTM_KYSE-520_SHP099_60min_R1 2 RDESLK 6 1 P12429;D6RA82;D6RFJ9 P12429 ANXA3 Annexin A3;Annexin 0 ; 129.39 0.018031000000000002 1561270000.0 874250.0 1151640.0 414810.0 423640.0 1344270.0 1851340.0 833770.0 632950.0 683820.0 5034400.0 False True 825753.6097258321 1096313.485753119 441549.3163194666 463902.6182279894 1450056.401149963 1839785.1003402967 918055.6084110399 630754.4441816406 559655.5256993904 4989799.132703927 0.16548834687827677 0.2197109455905165 0.0884903990273843 0.0929701989780508 0.2906041631307492 0.36870925089590406 0.18398648602785617 0.1264087846838517 0.11215993085399374 1.0 22.25055030951904 -10.970005062098048 2.7273939654212644 1.67438139721478 0.185778403621951 0.8915450330859651 0.08546414558538756 42728357.48407498 19146682.475461718 181857978.55389586 0.023421119772935716 1.0715068157761971e-11 10.970005062098048 -1.488602993592829 RDESLKVDEHLAK ddPTM_KYSE-520_SHP099_60min_R1 3 RDESLKVDEHLAK 13 2 P12429;D6RA82;D6RFJ9 P12429 ANXA3 Annexin A3;Annexin 0 ;; 175.29 5.7795e-07 5437390000.0 9208100.0 10811280.0 8236580.0 6151900.0 8092890.0 7568920.0 5192860.0 6500880.0 10422310.0 5976980.0 False True 8697308.33710773 10291889.88073789 8767523.125793952 6736574.726363816 8729754.400754716 7521679.562731683 5717804.966229715 6478329.9645968 8529881.229054455 5924028.607220068 1.4681408402565195 1.7373126571661681 1.4799933807052013 1.1371610728134292 1.4736178670904958 1.2696899460553643 0.9651886149335923 1.0935683120606747 1.4398784669369142 1.0 22.498147176763034 -5.345652550223397 0.7829043584872888 1.1477692595266504 1.6523039671563224 0.47464401796039757 0.17355510585102865 0.7761428944680413 0.8766473528887324 0.08667662996990527 0.26560892071850445 4.511775169476693e-06 5.345652550223397 0.504534707629672 RDFS(ph)PVPWSQYFESMEDVEVENETGK ddPTM_KYSE-520_SHP099_60min_R1 1 RDFSPVPWSQYFESMEDVEVENETGK 26 1 Q9Y570;Q9Y570-4 Q9Y570 PPME1 Protein phosphatase methylesterase 1 1 RDFS(0.998)PVPWS(0.001)QYFESMEDVEVENETGK 131.78 3.0155e-05 20596000.0 24314.0 24043.0 23309.0 31248.0 30433.0 22131.0 24570.0 28615.0 31802.0 23876.0 True False 22965.25395124265 22887.93819072125 24811.53543571862 34217.8005249462 32827.90395991643 21992.872219922363 27053.775380091927 28515.741243791203 26027.558463180394 23664.477215246916 0.9704526215540582 0.9671854561813288 1.0484717329708284 1.4459563257497117 1.3872228683237322 0.9293622681743612 1.143223031466814 1.2050019522687212 1.099857741476366 1.0 14.530435430622067 -5.011859758622794 24.318855195855537 1.1842734913105295 0.9785713331083934 0.24134056684506644 0.14766150025979427 553.1530176753353 1134270.1987684905 0.041678280267074985 0.07776766705277588 9.730613918000773e-06 5.011859758622794 -0.2057021582021361 RDFS(ph)PVPWSQYFESMEDVEVENETGKDTFR ddPTM_KYSE-520_SHP099_60min_R1 1 RDFSPVPWSQYFESMEDVEVENETGKDTFR 30 2 Q9Y570;Q9Y570-4 Q9Y570 PPME1 Protein phosphatase methylesterase 1 1 RDFS(1)PVPWSQYFESMEDVEVENETGKDTFR 242.28 2.9233e-31 220750000.0 76802.0 76827.0 75308.0 80433.0 65762.0 69468.0 62546.0 70336.0 102540.0 55685.0 True False 72541.63995900865 73136.11560032201 80162.47417706031 88077.32813693682 70937.09526540356 69034.4244441538 68868.76007013567 70092.02083254575 83921.3208230462 55191.67422227445 1.3143583879492469 1.3251294988041054 1.4524378052787545 1.595844470711676 1.285286164353654 1.2508122903851437 1.2478106714570614 1.269974535475457 1.5205431254915065 1.0 15.752163029448278 -5.957806142900964 24.999920155069564 1.2734055439121763 1.4201256867936418 0.24231407012011374 0.1375271105501913 231.30866613493714 137049.69003299542 0.04245456570448935 0.048138924120595575 1.1020311161161557e-06 5.957806142900964 0.1467201428814655 RDGPEETDWWWAALHGQEGYVPR ddPTM_KYSE-520_SHP099_60min_R1 2 RDGPEETDWWWAALHGQEGYVPR 23 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 0 ; 155.11 3.7311e-07 434790000.0 172758.0 138530.0 82642.0 106330.0 167190.0 151596.0 102812.0 132690.0 123427.0 109756.0 False True 163174.76935546525 131874.81086223078 87969.23555187511 116435.57123071991 180346.90181902648 150649.83313231915 113205.2403084255 132229.7293600788 101015.768141468 108783.64722887593 1.4999935515321787 1.2122668638308485 0.8086623108599381 1.0703407561408993 1.6578493773019456 1.3848573473121253 1.04064575138069 1.2155294727512986 0.928593319995379 1.0 16.731102175924505 -7.53320858609507 1.6175940765121832 0.9701898279667016 1.2436365178675775 0.17529361261323573 0.22972591969112496 0.8131084408321583 3.7947227511710167 0.22466651184818856 0.07316345311635 2.9294859126320022e-08 7.53320858609507 0.27344668990087584 RDGS(ph)YGSGR ddPTM_KYSE-520_SHP099_60min_R1 1 RDGSYGSGR 9 1 Q08170;A0A0D9SEM4;A0A0D9SGD2 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 RDGS(1)YGSGR 77.185 0.008540899999999999 0.0 114540.0 94000.0 68818.0 68616.0 108630.0 107920.0 80794.0 76911.0 107860.0 87390.0 True False 108186.23787017076 89484.09890312346 73254.11839269323 75137.2440098473 117178.56297984839 107246.43124910849 88961.4459934533 76644.21369216238 88275.34292933265 86615.79258839121 1.2490359394883672 1.0331152810476814 0.8457362820750912 0.8674774168136824 1.3528544792829547 1.2381856477231188 1.027081128452047 0.8848757414988397 1.019159904808905 1.0 16.40234247392113 -7.000901370279207 24.999758055817146 0.9624063656685369 1.0884860566202232 0.12340454921589372 0.1547773669811923 81.46162036476636 2259386.3042547684 0.0728522715700624 0.04842666459876909 9.979266705548216e-08 7.000901370279207 0.12607969095168636 RDGSYGSGR ddPTM_KYSE-520_SHP099_60min_R1 3 RDGSYGSGR 9 1 Q08170;A0A0D9SEM4;A0A0D9SGD2 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 0 ;; 147.62 0.00076191 413022000.0 263864.0 293062.0 123508.0 127384.0 301559.0 377355.0 185215.0 202730.0 203545.0 473318.0 False True 249226.93792015655 278982.86162497 131469.52329978722 139490.5370606039 325289.9776639972 374999.78747226985 203938.33972420546 202026.77694753784 166586.35895189154 469124.77075583185 0.531259386535087 0.5946879785850699 0.28024425802110103 0.2973420841450416 0.6933975734001537 0.7993604491787712 0.43472089396522284 0.43064615117645944 0.35510032583335005 1.0 18.83961215455678 -5.767263530576504 24.99991528072932 0.5902201729788275 0.42753809699703044 0.17269062650339606 0.20114018095425756 314.9573002559198 1351938.4379173915 0.06427712582444588 0.07482851639536596 1.7089779898575075e-06 5.767263530576504 -0.16268207598179701 RDGWPAMCIHGDK ddPTM_KYSE-520_SHP099_60min_R1 1 RDGWPAMCIHGDK 13 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 117.0 0.00024291 553590000.0 518350.0 483020.0 328740.0 305920.0 481340.0 489670.0 343410.0 424750.0 400030.0 354470.0 False True 489596.0921948929 459814.99417219934 349931.10640259733 334994.5448217978 519218.7195500334 486613.7878961366 378125.2341586231 423276.64138739556 327394.63593566586 351329.6715734871 1.39355178855847 1.3087849714282402 0.9960192227299617 0.9535048472321459 1.4778675459565593 1.3850631679264593 1.076268999612608 1.20478478089164 0.9318730025544831 1.0 18.42246589905926 -7.753178689610232 20.45026971519892 0.9659367025035299 1.2195018766676549 0.2787787550694669 0.1661866488162964 24.92945514790245 61731.48047760448 0.12688664912008482 0.045538160140995335 1.76531133736432e-08 7.753178689610232 0.25356517416412494 RDGWS(ph)LDR ddPTM_KYSE-520_SHP099_60min_R1 2 RDGWSLDR 8 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 RDGWS(1)LDR;RDGWS(1)LDR 82.48899999999999 0.0086704 525110000.0 1042630.0 864480.0 910670.0 919500.0 885620.0 1005280.0 927880.0 928020.0 1084350.0 846190.0 True False 984793.235468623 822949.0831890646 969373.245323517 1006889.0035422455 955313.2555114896 999005.6746303178 1021679.1656361287 924800.9152214964 887459.3742390302 838693.414925859 1.1741993175845782 0.9812275481640855 1.1558135882218774 1.2005447826620352 1.1390494291599271 1.1911452467033268 1.2181795486333298 1.1026686257018596 1.058145155840388 1.0 19.67778400310025 -10.25860468857537 7.076303472809991 0.9999992241452572 1.1368102499194312 0.26061922147687044 0.06852682182909427 8.749154597272692e-07 9.167049895380447e-08 0.06920903943277312 0.01678556234176192 5.5130929085849716e-11 10.25860468857537 0.13681102577417403 RDHALLEEQSK ddPTM_KYSE-520_SHP099_60min_R1 10 RDHALLEEQSK 11 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ;;;;;;;;; 209.97 2.8100999999999996e-09 9812000000.0 8092300.0 7520900.0 5363430.0 5479110.0 7435960.0 7528700.0 5885500.0 7244160.0 6923690.0 6046130.0 False True 7643403.987399895 7159584.674898957 5709165.279591418 5999842.967045506 8021127.747175118 7481710.590670529 6480463.776944693 7219031.699759658 5666522.428021428 5992565.992017958 1.275480987206622 1.1947444023871336 0.952707953019787 1.001214333732368 1.3385130439713446 1.2484986566082203 1.081417173474036 1.2046645309163622 0.9455919944092702 1.0 22.51474246069676 -7.7653230591097815 24.998871133855925 0.9727959077490768 1.156960631537398 0.30175506925629525 0.11500167955605556 142.59532332224057 917808.3069072822 0.10493510025037299 0.03107930350187458 1.7166309599520198e-08 7.7653230591097815 0.18416472378832116 RDHFEEAMR ddPTM_KYSE-520_SHP099_60min_R1 5 RDHFEEAMR 9 1 P55072 P55072 VCP Transitional endoplasmic reticulum ATPase 0 ;;;; 152.04 0.00060689 4100060000.0 2114990.0 2131420.0 1549580.0 1548960.0 1938380.0 2263210.0 1659020.0 2177690.0 2145820.0 1747970.0 False True 1997667.2885719622 2029023.3838733544 1649468.4062156626 1696172.692688196 2090919.4781264688 2249084.466894876 1826729.932074893 2170136.101666669 1756193.1797201978 1732484.34570008 1.1530651307355533 1.1711640505781573 0.9520827188479608 0.9790407035411273 1.2068908347229819 1.2981845824332936 1.054399098386502 1.252615128703941 1.0136848763332043 1.0 20.7244108859101 RDHHSTHYR ddPTM_KYSE-520_SHP099_60min_R1 2 RDHHSTHYR 9 1 P05060 P05060 CHGB Secretogranin-1;PE-11;GAWK peptide;CCB peptide 0 ; 81.97200000000001 0.021178 644120000.0 511520.0 538500.0 385370.0 541920.0 711480.0 404700.0 397070.0 482290.0 455220.0 366300.0 False True 483144.96591016033 512629.651695021 410211.56681380095 593423.9138658106 767469.4282325541 402174.11718415713 437209.71062975563 480617.04855733196 372563.523162348 363054.86697708786 1.3307767223532394 1.4119894768615586 1.1298886315155474 1.634529565205529 2.1139213326700523 1.1077502431871766 1.204252443356854 1.3238138151379288 1.0261906864503216 1.0 18.46982806765555 RDHRPPCAQEAPR ddPTM_KYSE-520_SHP099_60min_R1 8 RDHRPPCAQEAPR 13 2 E7EMC7;Q13501;Q13501-2;C9JRJ8;E9PFW8;E3W990 E7EMC7 SQSTM1 Sequestosome-1 0 ;;;;;;; 203.85 3.6051e-09 5353880000.0 324673.0 491013.0 330746.0 273180.0 449164.0 347955.0 324850.0 357785.0 492063.0 230192.0 False True 306662.74147042073 467423.9984544614 352066.41637231107 299142.9450654379 484510.6514064308 345783.28377764625 357689.0082304789 356543.92734264693 402716.76309879695 228152.6779666659 1.344111952590035 2.048733342164645 1.5431176154055464 1.311152460411374 2.1236246522480875 1.5155784576333866 1.5677616034063768 1.5627426796837314 1.765119597490044 1.0 17.79964006210841 -10.40151358405295 3.1899350751833624 0.9920221665813171 1.647604056519589 0.3640223087746517 0.2546648378664571 74270476.02056214 96920151.41928363 5420814.2345343055 0.061076381418465914 3.9672211988942755e-11 10.40151358405295 0.6555818899382719 RDKS(ph)PGRPLER ddPTM_KYSE-520_SHP099_60min_R1 4 RDKSPGRPLER 11 3 O14578-4;H7BYJ3;O14578;O14578-3 O14578-4 CIT Citron Rho-interacting kinase 1 RDKS(1)PGRPLER;RDKS(1)PGRPLER;RDKS(1)PGRPLER;RDKS(1)PGRPLER 81.632 0.010709999999999999 10818400000.0 2468060.0 2166640.0 2176950.0 2198350.0 2200820.0 2169610.0 2038800.0 1924960.0 2511390.0 1558950.0 True False 2331151.791844365 2062551.3622070586 2317279.6802431513 2407280.523041969 2374012.0130471294 2156068.6592140356 2244901.800770511 1918282.7630490414 2055384.8829899584 1545138.915844748 1.5087004591880941 1.3348646785453813 1.4997225534095513 1.5579702888564404 1.5364392086061889 1.3953882315075108 1.4528802412197308 1.2414953395955928 1.330226597694779 1.0 20.559305118904287 -8.057578080247891 0.6781373116558458 1.0019447225606954 1.483377684846055 0.7910434759087619 0.07375867607599818 0.37177953544712844 0.3919582882527518 0.07647653242694329 0.03061507222665826 8.758342403793237e-09 8.057578080247891 0.4814329622853595 RDLNES(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 RDLNESPVK 9 1 Q96RL1-2;Q96RL1;Q96RL1-3;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 RDLNES(1)PVK;RDLNES(1)PVK 155.86 0.00012609 1443320000.0 1949110.0 1751530.0 1705570.0 1717260.0 1809510.0 1713150.0 1646490.0 1646800.0 2117700.0 1705650.0 True False 1840988.9828455448 1667383.869699869 1815513.7712084856 1880467.874086956 1951908.142296467 1702457.595389274 1812933.2773938773 1641087.6351660092 1733179.0628726843 1690539.2679756219 1.0889951021664719 0.9863029515407348 1.073925820949736 1.112347941103296 1.1546068046285773 1.007050015127968 1.0723993886074112 0.9707480129291349 1.0252225995011182 1.0 20.689052096975598 -6.965461385371152 1.7373820971137965 0.9998888033715447 1.0752791557139068 0.30824318015465413 0.04757142884542531 0.4963216672998375 2.9610371329085057 0.030879647262529748 0.015895927333092853 1.0827759842160695e-07 6.965461385371152 0.07539035234236202 RDLS(ph)FLLDKK ddPTM_KYSE-520_SHP099_60min_R1 1 RDLSFLLDKK 10 2 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 RDLS(1)FLLDKK 74.85300000000001 0.014641999999999999 0.0 278900.0 266940.0 249540.0 214910.0 239940.0 237960.0 223200.0 281940.0 319540.0 256690.0 True False 263428.8610266336 254115.8017148914 265625.74767811695 235334.98178495216 258821.91292814843 236474.80337321985 245763.23422208067 280962.0159452904 261519.59094788614 254415.92630179806 1.0354259847480776 0.9988203388393593 1.044061004903527 0.9250009824691111 1.0173180456522357 0.929481132768018 0.9659899747413878 1.1043413045298207 1.0279214621087103 1.0 17.956829459828896 -7.240509155218346 24.98974862320555 1.049598549878841 0.9870374564810483 0.2437757342712027 0.04492195541069725 992.7862552703333 1185343.5260177962 0.02095272185095252 0.012080692208070258 5.7476570227212195e-08 7.240509155218346 -0.06256109339779259 RDPHLACVAYER ddPTM_KYSE-520_SHP099_60min_R1 4 RDPHLACVAYER 12 1 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 ;;; 95.264 0.00419 5214770000.0 2297590.0 2048070.0 1540280.0 1307070.0 2160710.0 1903740.0 1483070.0 1615270.0 1603650.0 1538400.0 False True 2170138.102567889 1949677.6429842575 1639568.913335138 1431293.5398150762 2330745.584241809 1891858.0525035013 1632993.188968374 1609667.0053768528 1312467.5847267222 1524770.97285709 1.423255125654393 1.2786691756933073 1.0752886449975774 0.9386941155714308 1.5285873260523168 1.2407489952137336 1.0709760469196885 1.0556778913233678 0.8607637527801587 1.0 20.540161129286886 -7.073424171500394 2.0433266360042412 0.9554962745501301 1.238238252401032 0.3798715457933408 0.16027619186415962 0.4066954531753292 3.2962774266450174 0.1047549756806301 0.05135796712210008 8.444536719771757e-08 7.073424171500394 0.28274197785090194 RDPSSNDINGGMEPTPSTVS(ph)TPS(ph)PSADLLGLR ddPTM_KYSE-520_SHP099_60min_R1 1 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 2 RDPSSNDINGGMEPTPS(0.001)T(0.003)VS(0.846)T(0.152)PS(0.975)PS(0.024)ADLLGLR 161.4 4.0451000000000003e-10 249500000.0 206480.0 225640.0 188190.0 189420.0 182270.0 183950.0 183100.0 199720.0 230030.0 212380.0 True False 195026.14279232456 214799.91570745528 200321.02851464608 207422.41984880035 196613.61202556334 182801.899817212 201609.53488379446 199027.21793499865 188262.35058440935 210498.47842913953 0.9264966865685756 1.0204345290779084 0.9516507198035662 0.9853867894756556 0.9340381626166943 0.868423853613502 0.9577719344496954 0.9455043068256549 0.8943644248135714 1.0 17.683450279364262 -5.82507484536066 6.800426819350068 0.9282846609431636 0.9730714931090071 0.16780032101561104 0.04010620448395338 0.3217957047736358 27.34866964781347 0.011944469108843512 0.013651646844628171 1.4959778203336865e-06 5.82507484536066 0.04478683216584345 RDPSSNDINGGMEPTPSTVS(ph)TPSPSADLLGLR ddPTM_KYSE-520_SHP099_60min_R1 3 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 RDPSSNDINGGMEPTPST(0.002)VS(0.431)T(0.203)PS(0.363)PSADLLGLR;RDPSSNDINGGMEPTPS(0.002)T(0.008)VS(0.387)T(0.292)PS(0.307)PS(0.003)ADLLGLR;RDPSSNDINGGMEPTPSTVS(0.599)T(0.091)PS(0.295)PS(0.015)ADLLGLR 229.69 2.3893999999999998e-23 6177100000.0 705040.0 930660.0 736653.0 525880.0 530807.0 770561.0 535366.0 730062.0 861280.0 760450.0 True False 665930.0257376041 885949.6966508597 784138.8310664743 575859.4770884132 572578.4910213043 765751.6429739101 589486.0199486491 727529.585319751 704893.2631019434 753713.0046211472 0.8835326200485727 1.1754470086345148 1.040367920227966 0.7640301727019666 0.7596770753731522 1.0159724434618373 0.7821093922148171 0.9652607568917332 0.9352276778828529 1.0 19.523655759695675 -5.1609763308152 9.135541548544044 0.8830032100977502 1.0484718659645882 0.2568142795873807 0.1112477547506271 0.44780631590659564 37.63683684681172 0.029626301978669244 0.051442940110247 6.902774231500868e-06 5.1609763308152 0.165468655866838 RDPSSNDINGGMEPTPSTVST(ph)PS(ph)PSADLLGLR ddPTM_KYSE-520_SHP099_60min_R1 1 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 2 RDPSSNDINGGMEPT(0.008)PS(0.048)T(0.048)VS(0.463)T(0.502)PS(0.711)PS(0.219)ADLLGLR 53.674 0.011903 0.0 42273.0 45325.0 41006.0 35587.0 38071.0 37571.0 36988.0 43464.0 48040.0 39817.0 True False 39928.03242086375 43147.51896578796 43649.31237191976 38969.177780378326 41066.97110564117 37336.50545274518 40727.108008092844 43313.23352857386 39317.14698984927 39464.25235715725 1.0117519029502755 1.0933317214601357 1.106046859240791 0.9874551132427791 1.0406119121167956 0.9460841957639118 1.031999989243596 1.097530827052867 0.9962724400306218 1.0 15.268258797446936 -5.2636353327143635 24.99810198261506 1.017337098451888 1.0726723169175432 0.2541666528130637 0.043765197788291965 283.31809807436673 3225215.7090911977 0.012493070663262187 0.019672623664792964 5.449600514514171e-06 5.2636353327143635 0.055335218465655256 RDPSSNDINGGMEPTPSTVST(ph)PSPSADLLGLR ddPTM_KYSE-520_SHP099_60min_R1 1 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 RDPSSNDINGGMEPTPSTVS(0.002)T(0.467)PS(0.467)PS(0.065)ADLLGLR 180.76 1.1663e-10 628290000.0 203470.0 249570.0 175320.0 151150.0 177090.0 284290.0 171310.0 230120.0 291650.0 211660.0 True False 192183.11349261098 237580.28258779258 186621.407721918 165515.25055509552 191025.97549573184 282515.640657979 188627.6866244829 229321.7674304119 238693.71189820042 209784.85706898832 0.9160962148445778 1.1324949088659133 0.8895847409069523 0.7889761580868794 0.9105803829916685 1.3466922475013197 0.8991482476852568 1.093128315524694 1.1378023906639998 1.0 17.678551017843244 RDPSSNDINGGMEPTPSTVSTPS(ph)PSADLLGLR ddPTM_KYSE-520_SHP099_60min_R1 6 RDPSSNDINGGMEPTPSTVSTPSPSADLLGLR 32 1 O95782-2;O95782 O95782-2 AP2A1 AP-2 complex subunit alpha-1 1 RDPSSNDINGGMEPTPS(0.001)T(0.002)VS(0.173)T(0.173)PS(0.326)PS(0.326)ADLLGLR;RDPSSNDINGGMEPT(0.002)PS(0.021)T(0.021)VS(0.076)T(0.091)PS(0.666)PS(0.123)ADLLGLR;RDPSSNDINGGMEPTPSTVS(0.03)T(0.026)PS(0.939)PS(0.006)ADLLGLR;RDPSSNDINGGMEPTPSTVS(0.002)T(0.045)PS(0.946)PS(0.007)ADLLGLR;RDPSSNDINGGMEPTPSTVS(0.002)T(0.025)PS(0.968)PS(0.005)ADLLGLR;RDPSSNDINGGMEPTPSTVS(0.055)T(0.162)PS(0.54)PS(0.243)ADLLGLR 250.22 1.1825e-31 7077410000.0 1030555.0 1243280.0 1012107.0 694640.0 798261.0 1119447.0 746273.0 1058492.0 1183500.0 1119185.0 True False 973388.059789541 1183550.9625986735 1077349.0366484574 760658.3767488684 861079.5992162075 1112460.1160352184 821713.5577626112 1054820.3383058892 968606.2336071326 1109269.8916127544 0.8775033624813737 1.0669639296509912 0.971223545139328 0.685728858684658 0.7762579744811193 1.002875967739308 0.740769729689437 0.9509140618360229 0.8731925755227047 1.0 20.08117899336243 -5.038526203591728 24.982061344448002 0.8544995092935203 0.9839488237807507 0.1743207987333788 0.10890043157113857 764.1333232562847 495496.4526858199 0.028949816432462996 0.05015608751309913 9.151110434759e-06 5.038526203591728 0.1294493144872304 RDPYGFGDSR ddPTM_KYSE-520_SHP099_60min_R1 2 RDPYGFGDSR 10 1 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 0 ; 99.75200000000001 0.0053393 758330000.0 819320.0 758200.0 479300.0 405650.0 690930.0 668430.0 571180.0 556960.0 596240.0 604820.0 False True 773870.686326072 721774.933918598 510196.44490711536 444202.85403687984 745302.2601460603 664258.0804284816 628920.4485796057 555028.0357554406 487977.8459872552 599461.7653428395 1.2909425272243775 1.2040383151139022 0.8510908858638011 0.7410028123859322 1.2432857326935818 1.1080908221871069 1.0491418885071317 0.9258772916701589 0.8140266388935994 1.0 19.193308213548594 -4.621899469958713 5.790284048879914 0.974433013071675 1.2696677516899908 0.39728958753458044 0.13968242101315317 0.20757322988621862 9.85788848619501 0.03875986510972663 0.10647292120297747 2.3883640749975686e-05 4.621899469958713 0.29523473861831584 RDQALTEEHAR ddPTM_KYSE-520_SHP099_60min_R1 8 RDQALTEEHAR 11 1 P12814-3;P12814;P12814-2;P12814-4;H9KV75;H0YJ11 P12814-3 ACTN1 Alpha-actinin-1 0 ;;;;;;; 222.72 1.2218e-09 14498171000.0 4151657.0 4123308.0 2865999.0 2587628.0 4101714.0 4017685.0 2781964.0 3665926.0 3598857.0 3193129.0 False True 3921356.310086954 3925218.094468516 3050745.881300531 2833555.387121271 4424495.556239764 3992609.1376304217 3063192.0704722037 3653209.7583395643 2945395.288602162 3164840.36127677 1.2390376330087587 1.2402578475980355 0.9639493728112685 0.8953233223991586 1.3980153976723237 1.2615515103010473 0.9678820164049099 1.1543109102873597 0.9306615665802244 1.0 21.593701299371848 -6.773612956713836 24.98070928706845 1.0260728683570732 1.158725063999014 0.202370751025022 0.1476019049265214 478.7543823624756 982415.3072540935 0.06630777416026004 0.04507862032080468 1.6841743287838232e-07 6.773612956713836 0.13265219564194086 RDRDGYSYGSR ddPTM_KYSE-520_SHP099_60min_R1 3 RDRDGYSYGSR 11 2 Q13247;Q13247-3;A0A590UJP7;A0A590UJK4;Q13247-2;A0A590UK01;A0A590UK80 Q13247;A0A590UK01;A0A590UK80 SRSF6 Serine/arginine-rich splicing factor 6 0 ;; 125.03 0.00012625 578804000.0 121859.0 150624.0 112719.0 84650.0 104919.0 130244.0 101305.0 138987.0 145916.0 93769.0 False True 115099.23835010591 143387.79694876654 119985.04709677666 92695.11054904952 113175.52839254997 129431.09888444135 111545.8980415229 138504.88653680976 119421.33264302339 92938.2796111781 1.2384481274200647 1.5428281817637675 1.291018594262267 0.9973835424633862 1.2177493371518988 1.3926564966119095 1.2002147931744884 1.4902889005075919 1.2849531231118254 1.0 16.503985318788082 -11.284597163081017 1.8524597157588538 4.110085628964837e-05 1.297022527399806 0.2661310730597286 0.14695930315059358 1859132.6584476682 260486.34183370028 7759548.534625384 0.041942757471707115 5.19281483604905e-12 11.284597163081017 1.2969814265435162 RDRPPCS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 RDRPPCSPSR 10 2 B1ALY4;X6R242;O95758-1;O95758-6;O95758-2;O95758;O95758-5;O95758-4 B1ALY4 PTBP3 Polypyrimidine tract-binding protein 3 1 RDRPPCS(0.999)PS(0.001)R 81.904 0.006359399999999999 811600000.0 159260.0 126300.0 142560.0 119740.0 143800.0 140550.0 130830.0 111340.0 156040.0 120920.0 True False 150425.530323061 120232.35841983515 151749.64570406504 131120.05359885635 155116.24188992154 139672.77531562452 144055.57317775447 110953.78752695133 127707.06944829477 119848.74287433657 1.2551281449884266 1.0032008307830211 1.2661763658478846 1.0940461322680533 1.2942667413087807 1.1654087641292472 1.2019781745128455 0.9257818218693228 1.06556870256201 1.0 16.870855250687335 -7.2519625883570775 24.869116559823436 0.9967564455858958 1.179373632397127 0.49019537396544355 0.08676437180695688 488.1163433059273 1280925.4421161087 0.03894523391418908 0.02209837081592366 5.5980582304613995e-08 7.2519625883570775 0.18261718681123107 RDRS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 1 RDRSPIR 7 2 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 RDRS(1)PIR 73.499 0.017922999999999998 1557600000.0 180220.0 180520.0 138550.0 136400.0 142500.0 208140.0 176910.0 173030.0 184390.0 158140.0 True False 170222.83734033685 171847.54823395592 147481.154687838 149363.41498984458 153713.9392859096 206840.9210543873 194793.7892752162 172429.7993155055 150909.42409363668 156739.00263105822 1.086027309622594 1.096393018644256 0.9409346251550935 0.9529435078863252 0.980699996207905 1.3196518899719045 1.2427907923705095 1.1001077997247515 0.9628070968963383 1.0 17.258004696371785 RDRS(ph)PIRGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 10 RDRSPIRGSPR 11 3 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 2 RDRS(1)PIRGS(1)PR;RDRS(1)PIRGS(1)PR;RDRS(1)PIRGS(1)PR;RDRS(1)PIRGS(1)PR;RDRS(1)PIRGS(1)PR;RDRS(1)PIRGS(1)PR;RDRS(1)PIRGS(1)PR;RDRS(1)PIRGS(1)PR;RDRS(1)PIRGS(1)PR;RDRS(1)PIRGS(1)PR 109.48 0.00048895 27502390000.0 4479777.0 4074766.0 3785198.0 3924640.0 3930957.0 3881378.0 3775961.0 3999624.0 4720150.0 3332110.0 True False 4231274.839595954 3879008.1250115433 4029197.9196109367 4297636.605613955 4240300.951814186 3857152.8801779333 4157671.9877080694 3985750.237863263 3863089.745298438 3302590.097742356 1.2811989118747873 1.1745351406652693 1.2200115062312118 1.3012927667141652 1.2839319522918837 1.1679175332157252 1.258912509472564 1.2068558676379229 1.1697151723246668 1.0 21.655166489401285 -8.392116123426556 0.9386216629822105 0.999116247578866 1.2414779864653183 0.7469199859109037 0.04208892923143626 0.6734560440200714 1.0136761857487107 0.042167118358856705 0.01382788343236363 4.054001234198475e-09 8.392116123426556 0.2423617388864523 RDS(ph)ALQQLR ddPTM_KYSE-520_SHP099_60min_R1 1 RDSALQQLR 9 1 Q6P2H3-2;Q6P2H3;H7BZW2;Q6P2H3-3;Q6P2H3-4 Q6P2H3-2 CEP85 Centrosomal protein of 85 kDa 1 RDS(1)ALQQLR 140.0 0.00050887 0.0 111670.0 91374.0 120380.0 94341.0 95713.0 101650.0 85928.0 104500.0 164380.0 104920.0 True False 105475.44249137404 86984.2558848297 128139.88741481019 103307.14027534406 103245.06856752484 101015.56464484714 94614.44081646473 104137.5138904834 134532.73568258568 103990.4904265248 1.0142796909482645 0.8364635605434425 1.2322269746900396 0.9934287246037794 0.9928318266800882 0.9713923285727782 0.9098374325228826 1.0014138164302868 1.2937022907651419 1.0 16.66609207932461 -7.574524428392933 23.453511512582384 1.147088855523925 0.9924634133372728 0.22010169408852298 0.11519601169779917 81.5357276053319 37024.582625046285 0.07502314257200382 0.028356097734347347 2.6636402669077175e-08 7.574524428392933 -0.15462544218665208 RDS(ph)ASYR ddPTM_KYSE-520_SHP099_60min_R1 4 RDSASYR 7 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 RDS(0.932)AS(0.068)YR;RDS(1)ASYR;RDS(0.801)AS(0.199)YR;RDS(0.71)AS(0.288)Y(0.002)R 116.13 0.0017722 7287530000.0 1328207.0 1086436.0 1171828.0 1346269.0 1579177.0 1754160.0 1973570.0 2076040.0 2449210.0 2226520.0 True False 1254528.7099949887 1034241.9837863164 1247365.9078710908 1474218.0009894667 1703449.2456119661 1743211.6367673886 2173077.7157870606 2068838.7017913787 2004495.2035597146 2206794.765006346 0.568484541421042 0.4686625146055855 0.565238747005775 0.6680358429186446 0.7719110415811901 0.789929206109194 0.9847212573847172 0.9374857755680008 0.9083287831498685 1.0 21.073521032527747 -5.902276682769471 0.8188889220675737 0.9651695878924479 0.496580718694645 0.9371839568943551 0.04554258103999521 0.14253959203723648 0.2108239305001501 0.02595508013556744 0.03683382133120614 1.2523430709757142e-06 5.902276682769471 -0.4685888691978029 RDS(ph)DGVDGFEAEGK ddPTM_KYSE-520_SHP099_60min_R1 8 RDSDGVDGFEAEGK 14 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK;RDS(1)DGVDGFEAEGK 247.44 1.1989e-18 6125960000.0 6295780.0 5789950.0 5685050.0 5957180.0 6263180.0 5964570.0 6480810.0 7180390.0 7489040.0 6505070.0 True False 5946540.533073726 5511792.111107874 6051517.419401611 6523348.596108516 6756056.633380528 5927342.906185104 7135953.521410413 7155482.903005629 6129219.119335147 6447440.140667876 0.922310312827152 0.8548806954161066 0.9385922610170596 1.011773425388138 1.047866515388956 0.9193327548398306 1.106788642580746 1.1098176558277295 0.9506438191918187 1.0 22.62029504312967 -5.15153401680915 2.7277999541005764 1.0271443177896835 0.8888227752566731 0.4603283696664743 0.05867740867727564 0.23768596902044098 3.421986497374723 0.01708841071554825 0.033839662638239044 7.054495864206845e-06 5.15153401680915 -0.13832154253301043 RDS(ph)DGVDGFEAEGKK ddPTM_KYSE-520_SHP099_60min_R1 6 RDSDGVDGFEAEGKK 15 2 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RDS(1)DGVDGFEAEGKK;RDS(1)DGVDGFEAEGKK;RDS(1)DGVDGFEAEGKK;RDS(1)DGVDGFEAEGKK;RDS(1)DGVDGFEAEGKK;RDS(1)DGVDGFEAEGKK 209.66 3.8226999999999996e-14 5715210000.0 5279480.0 5109140.0 5222110.0 5180440.0 5463140.0 4883100.0 5227470.0 5697850.0 7455330.0 5274640.0 True False 4986616.720017544 4863689.245424508 5558735.566271423 5672787.460043921 5893058.036985432 4852622.761606031 5755913.682790773 5678085.488238184 6101630.005575207 5227910.793207823 0.9538450285908145 0.9303313384274811 1.0632804931356925 1.085096453331623 1.1272300293726851 0.9282145303455882 1.1009969202743357 1.0861098654581547 1.1671258839195444 1.0 22.317803093147898 -4.778782880182883 8.350167682609968 1.0716461241474382 0.9419163808725696 0.3974170388837779 0.06285328593335711 0.15036766003098462 57.386260842501514 0.01640040637261644 0.036054087594461014 1.66424445956669e-05 4.778782880182883 -0.12972974327486864 RDS(ph)DKEMATK ddPTM_KYSE-520_SHP099_60min_R1 8 RDSDKEMATK 10 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 RDS(0.914)DKEMAT(0.086)K;RDS(0.999)DKEMAT(0.001)K;RDS(1)DKEMATK;RDS(1)DKEMATK;RDS(1)DKEMATK;RDS(1)DKEMATK;RDS(1)DKEMATK;RDS(1)DKEMATK 222.75 1.5164e-09 10656420000.0 11139700.0 10027500.0 8414250.0 9980820.0 11035400.0 11063170.0 10596950.0 11155500.0 11866070.0 12055960.0 True False 10521758.634558585 9545763.848415652 8956646.018276013 10929394.131957034 11903823.19716302 10994120.652355466 11668193.122265588 11116804.174213264 9711490.807282275 11949153.573794952 0.8805442636232653 0.7988652743864599 0.7495632190984937 0.9146584370566382 0.9962063943398181 0.920075265955748 0.9764869997030148 0.9303423966859822 0.8127346215199731 1.0 23.510405091778445 -5.397668724305807 5.99076343563582 0.9382180894909306 0.8094004935195905 0.5016137322639392 0.05798184103169371 0.1918291234933173 8.555190765467415 0.016512947587401933 0.02461566036008638 4.00249940190168e-06 5.397668724305807 -0.12881759597134002 RDS(ph)DSFLNIFPEK ddPTM_KYSE-520_SHP099_60min_R1 2 RDSDSFLNIFPEK 13 1 A0A0A6YYJ5;O94854-2;O94854 A0A0A6YYJ5 MACF1;KIAA0754 Uncharacterized protein KIAA0754 1 RDS(0.996)DS(0.004)FLNIFPEK;RDS(0.996)DS(0.004)FLNIFPEK 159.69 1.2164e-06 116205000.0 193098.0 196769.0 175608.0 158058.0 173761.0 174534.0 162903.0 178498.0 225260.0 167440.0 True False 182386.46900868055 187315.92188370952 186927.9726627345 173079.78479812955 187435.00213515075 173444.66856589995 179370.82502007004 177878.83209974645 184358.46234249455 165956.61186634866 1.0990009193219943 1.1287041822386827 1.126366527736026 1.0429218989931988 1.129421720697091 1.0451205686555094 1.0808296397646655 1.0718393807834496 1.110883503038527 1.0 17.340446583315334 -13.999999999999917 0.13284610464912275 0.7028617244112185 1.127470126916478 0.46489721353987146 0.030350770215887484 127.37672037355149 1.0574267472796475 10.149325317696587 0.21374391118972508 1.0000000000001922e-14 13.999999999999917 0.42460840250525944 RDS(ph)DTYR ddPTM_KYSE-520_SHP099_60min_R1 2 RDSDTYR 7 1 H3BUL5;H3BVF8;P49761-3;P49761-1;P49761;H3BRT8;H3BQR7;H3BV35;H3BRK0;P49761-2;H3BQG1 H3BUL5 CLK3 Dual specificity protein kinase CLK3 1 RDS(0.951)DT(0.049)YR;RDS(0.889)DT(0.111)YR 112.83 0.0018745 269250000.0 138529.0 107112.0 101802.0 94344.0 140671.0 133930.0 100191.0 108548.0 127547.0 115445.0 True False 130844.52021928484 101966.17874161017 108364.31980895909 103310.42539444205 151741.0073914961 133094.09319118896 110319.28404993039 108171.47232329356 104387.67999821625 114422.2471148508 1.1435234276420936 0.8911394533203153 0.9470563858109595 0.9028875764932731 1.3261495139069133 1.163183703756459 0.9641419114868275 0.945370983797556 0.9123023068532957 1.0 16.804008056989076 -6.969165907051926 24.53554276715428 0.9482531915571917 1.054849171483713 0.14595448915148768 0.1259739491404937 363.19218738043963 289001.0832391629 0.058001357460502494 0.03910401004210827 1.0735792105201971e-07 6.969165907051926 0.10659597992652126 RDS(ph)FDDR ddPTM_KYSE-520_SHP099_60min_R1 3 RDSFDDR 7 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RDS(1)FDDR;RDS(1)FDDR;RDS(1)FDDR 138.76 0.001117 2234400000.0 1324400.0 1152870.0 1075900.0 1285300.0 1317240.0 1537550.0 1705710.0 1859170.0 1760050.0 1595530.0 True False 1250932.8918740556 1097484.39470685 1145254.2355008645 1407454.5255604638 1420899.2939296258 1527953.5801247868 1878139.81292538 1852720.9732035394 1440469.2872498794 1581394.8455035554 0.7910313451639761 0.6939977057768794 0.7242051147170567 0.8900082920861522 0.8985101336138327 0.9662062479015153 1.1876476126538364 1.1715739294784326 0.9108852803875166 1.0 20.59276619668485 -5.882523823731728 1.1940675573868422 1.0755778164888667 0.7321478197193353 0.7047793981236345 0.0860530406804903 0.24684000554393123 0.7440130126509127 0.038415153028442735 0.04950526354515489 1.3106181449029305e-06 5.882523823731728 -0.34342999676953145 RDS(ph)FDDRGPSLNPVLDYDHGSR ddPTM_KYSE-520_SHP099_60min_R1 13 RDSFDDRGPSLNPVLDYDHGSR 22 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RDS(1)FDDRGPSLNPVLDYDHGSR;RDS(1)FDDRGPSLNPVLDYDHGSR;RDS(1)FDDRGPSLNPVLDYDHGSR;RDS(0.996)FDDRGPS(0.004)LNPVLDYDHGSR;RDS(1)FDDRGPSLNPVLDYDHGSR;RDS(1)FDDRGPSLNPVLDYDHGSR;RDS(1)FDDRGPSLNPVLDYDHGSR;RDS(1)FDDRGPSLNPVLDYDHGSR;RDS(1)FDDRGPSLNPVLDYDHGSR;RDS(0.999)FDDRGPS(0.001)LNPVLDYDHGSR;RDS(1)FDDRGPSLNPVLDYDHGSR;RDS(1)FDDRGPSLNPVLDYDHGSR;RDS(1)FDDRGPSLNPVLDYDHGSR 268.83 2.544e-36 47609040000.0 8031008.0 11262014.0 19845420.0 8998701.0 8157043.0 12726390.0 9286195.0 9468622.0 11618051.0 12390130.0 True False 7585511.976822462 10720969.942812342 21124687.526994705 9853934.837481901 8798955.876874072 12646959.879395314 10224934.21512955 9435777.560274994 9508505.805632083 12280363.087575288 0.6176944380819763 0.8730173421060596 1.720200565435048 0.8024139650603379 0.7165061663181974 1.0298522762890399 0.8326247475104929 0.7683630763182958 0.7742853967609765 1.0 23.549849881019007 RDS(ph)FDNCSLGESSK ddPTM_KYSE-520_SHP099_60min_R1 1 RDSFDNCSLGESSK 14 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RDS(0.499)FDNCS(0.499)LGES(0.001)S(0.001)K 203.52 3.6255e-10 0.0 334470.0 316770.0 273320.0 317700.0 297990.0 333980.0 337660.0 321900.0 435490.0 311920.0 True False 315916.2823505849 301551.89371853665 290938.6445274623 347894.11248001177 321440.1176688301 331895.5069364089 371793.968044031 320783.4040320249 356415.9938095227 309156.6314700876 1.021864809589735 0.9754016670598677 0.9410719839454973 1.1253005016444946 1.0397322423275626 1.073551310732668 1.2026071259610158 1.037608032234826 1.1528654330159749 1.0 18.23797842645726 -5.2633677129515055 24.998815630065174 1.0936871949257814 0.9790417030683796 0.42408069751541677 0.059069909969982175 154.1569223580916 1998487.9332108605 0.015844885581667207 0.02493417889331975 5.452959687385378e-06 5.2633677129515055 -0.1146454918574018 RDS(ph)FIGTPYWMAPEVVMCETMK ddPTM_KYSE-520_SHP099_60min_R1 7 RDSFIGTPYWMAPEVVMCETMK 22 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 RDS(0.707)FIGT(0.16)PY(0.133)WMAPEVVMCETMK;RDS(0.968)FIGT(0.018)PY(0.014)WMAPEVVMCETMK;RDS(0.999)FIGT(0.001)PYWMAPEVVMCETMK;RDS(0.952)FIGT(0.048)PYWMAPEVVMCETMK;RDS(0.991)FIGT(0.005)PY(0.005)WMAPEVVMCETMK;RDS(0.974)FIGT(0.014)PY(0.012)WMAPEVVMCETMK;RDS(0.709)FIGT(0.187)PY(0.104)WMAPEVVMCETMK 208.45 1.8064000000000002e-19 1847659000.0 906757.0 1090012.0 837939.0 1085369.0 944245.0 886623.0 847626.0 1028695.0 1150900.0 865138.0 True False 856457.3816347352 1037646.187378633 891953.8886898041 1188522.1434319115 1018551.7094808687 881089.256980897 933312.3081125687 1025126.6971442169 941925.5718280084 857473.5503871783 0.9988149270003904 1.2101203435489067 1.0402115473848224 1.3860744076540361 1.1878520439737856 1.0275410321205307 1.0884444280422954 1.1955199045863718 1.0984893602872032 1.0 19.709732645064808 -6.233037067064939 24.479349526112802 1.0946217639592497 1.1725347917297988 0.11854471625124052 0.10891333839322453 1355.0402558944568 1167880.8768412536 0.036179750216469166 0.03617197070253341 5.847401743991103e-07 6.233037067064939 0.07791302777054909 RDS(ph)FIGTPYWMAPEVVMCETSK ddPTM_KYSE-520_SHP099_60min_R1 18 RDSFIGTPYWMAPEVVMCETSK 22 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 RDS(0.779)FIGT(0.177)PY(0.044)WMAPEVVMCETSK;RDS(0.604)FIGT(0.221)PY(0.176)WMAPEVVMCETSK;RDS(0.906)FIGT(0.084)PY(0.009)WMAPEVVMCETSK;RDS(0.935)FIGT(0.044)PY(0.021)WMAPEVVMCETSK;RDS(0.924)FIGT(0.076)PYWMAPEVVMCETSK;RDS(0.875)FIGT(0.123)PY(0.002)WMAPEVVMCETSK;RDS(0.908)FIGT(0.092)PYWMAPEVVMCETSK;RDS(0.788)FIGT(0.21)PY(0.002)WMAPEVVMCETSK;RDS(1)FIGTPYWMAPEVVMCETSK;RDS(1)FIGTPYWMAPEVVMCETSK;RDS(0.924)FIGT(0.076)PYWMAPEVVMCETSK;RDS(0.936)FIGT(0.064)PYWMAPEVVMCETSK;RDS(0.998)FIGT(0.001)PYWMAPEVVMCETSK;RDS(1)FIGTPYWMAPEVVMCETSK;RDS(0.999)FIGT(0.001)PYWMAPEVVMCETSK;RDS(0.999)FIGT(0.001)PYWMAPEVVMCETSK;RDS(0.999)FIGT(0.001)PYWMAPEVVMCETSK;RDS(0.941)FIGT(0.059)PYWMAPEVVMCETSK 285.26 1.2636e-44 22373167000.0 6609002.0 6590506.0 5610752.0 5599064.0 5647261.0 5445862.0 5001697.0 6084181.0 7478956.0 5797766.0 True False 6242387.4843411455 6273888.199208812 5972430.051440611 6131197.359140025 6091668.312180259 5411872.355218061 5507317.344618628 6063076.396169514 6120966.119538203 5746402.303833692 1.0863122966828407 1.091794111773763 1.0393337841062964 1.0669627768751273 1.060083855966058 0.9417844538325396 0.9583939747734752 1.0551082356563435 1.0651823168479906 1.0 22.45422756836037 -6.032502070514299 23.834488812932864 1.004265392344556 1.0694614788636156 0.430218294927058 0.037441598073727655 405.0776989148846 297051.46326290723 0.013620019011613537 0.013633122075108892 9.278930663537814e-07 6.032502070514299 0.06519608651905973 RDS(ph)GDNSAPSGQER ddPTM_KYSE-520_SHP099_60min_R1 5 RDSGDNSAPSGQER 14 1 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 RDS(1)GDNSAPSGQER;RDS(0.971)GDNS(0.019)APS(0.01)GQER;RDS(1)GDNSAPSGQER;RDS(1)GDNSAPSGQER;RDS(1)GDNSAPSGQER 112.08 0.00065688 489263000.0 716184.0 637366.0 598856.0 670647.0 653420.0 675751.0 662033.0 714998.0 800920.0 648655.0 True False 676455.8458425918 606745.98065413 637459.215963478 734385.0892426266 704840.436548765 671533.3873518945 728957.7564594388 712517.838819787 655493.1175501677 642908.4213459535 1.0521807202749118 0.9437518012034809 0.9915241343843849 1.1422856893135156 1.0963310063245937 1.0445241733589576 1.1338438450274733 1.108272679533585 1.0195746326947588 1.0 19.294253722908426 -5.233157886348988 22.91314399562682 1.084061149591327 0.990612089899386 0.35176006819117056 0.05037910085965908 246.16986867552473 199440.62602921325 0.013183450229987527 0.02282472355455266 5.845775242479427e-06 5.233157886348988 -0.09344905969194106 RDS(ph)GVGASLTRPNR ddPTM_KYSE-520_SHP099_60min_R1 6 RDSGVGASLTRPNR 14 2 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 RDS(0.946)GVGAS(0.042)LT(0.012)RPNR;RDS(0.877)GVGAS(0.046)LT(0.077)RPNR;RDS(0.929)GVGAS(0.059)LT(0.012)RPNR;RDS(1)GVGASLTRPNR;RDS(0.755)GVGAS(0.243)LT(0.002)RPNR;RDS(0.999)GVGAS(0.001)LTRPNR 137.68 5.1083e-06 15072380000.0 3951490.0 3196570.0 2891180.0 3183010.0 3119440.0 3068070.0 3367830.0 3260910.0 3541230.0 3291570.0 True False 3732292.972599975 3043001.9790506097 3077550.088851556 3485522.313393148 3364922.1808143 3048921.037087218 3708283.1232533637 3249598.664312116 2898231.899143711 3262409.2506027115 1.1440296682307578 0.9327468583190268 0.9433366118254466 1.0683890479863059 1.0314224618486016 0.9345611794485769 1.1366701227224265 0.9960732742870231 0.8883716531297474 1.0 21.637506340577165 -4.244616316846865 24.212763146806918 0.9970364496215972 1.144029848414956 0.2970584245709029 0.06964832309509478 3005.1884795985884 4325144.27562712 0.017506446480176723 0.46296709261185337 5.69355713484854e-05 4.244616316846865 0.14699339879335882 RDS(ph)ICS(ph)SVSLESSAAETQEEMLQVLK ddPTM_KYSE-520_SHP099_60min_R1 2 RDSICSSVSLESSAAETQEEMLQVLK 26 1 Q08378-4;Q08378-2;Q08378 Q08378-4 GOLGA3 Golgin subfamily A member 3 2 RDS(0.601)ICS(0.291)S(0.288)VS(0.301)LES(0.263)S(0.246)AAET(0.011)QEEMLQVLK;RDS(0.542)ICS(0.445)S(0.297)VS(0.492)LES(0.178)S(0.047)AAETQEEMLQVLK 92.91 0.0032437 99083000.0 28970.0 35979.0 35579.0 42493.0 38974.0 31232.0 31201.9 34591.0 50616.0 40072.0 True False 27362.976349736753 34250.51483441998 37872.479268412746 46531.521944013715 42041.03206827402 31037.069503077844 34356.092553198636 34471.011894600095 41425.410325524805 39716.99325554423 0.6889488379364433 0.8623642432861867 0.9535585693694474 1.1715771545097569 1.0585149736229182 0.7814556681917324 0.8650224938264367 0.8679159490450141 1.0430147634537288 1.0 15.277468788430165 -4.387426528542625 2.4562299513470034 0.9624346122776761 0.6651038090038004 0.39581487357055667 0.10598570307677967 0.4739800881997251 4.262272065131786 0.03117522471425749 0.2618575204652994 4.0980143181282556e-05 4.387426528542625 -0.29733080327387573 RDS(ph)ICSS(ph)VSLESSAAETQEEMLQVLK ddPTM_KYSE-520_SHP099_60min_R1 1 RDSICSSVSLESSAAETQEEMLQVLK 26 1 Q08378-4;Q08378-2;Q08378 Q08378-4 GOLGA3 Golgin subfamily A member 3 2 RDS(0.645)ICS(0.383)S(0.42)VS(0.32)LES(0.121)S(0.111)AAETQEEMLQVLK 95.586 0.0027729 49958000.0 32628.0 31583.0 30659.0 34611.0 28363.0 31195.0 34510.0 37617.0 40338.0 26630.0 True False 30818.059797694546 30065.705272950523 32635.328196134447 37900.419033823404 30595.00673660532 31000.30043380228 37998.60758514337 37486.51540687379 33013.636038229386 26394.07891782651 1.1676126260606157 1.1391079554833112 1.2364639924635752 1.43594399152249 1.1591617510827972 1.1745172290465773 1.439664089186275 1.4202623066931677 1.2507970496341905 1.0 14.687926700270241 -4.929724185259547 5.152699358628688 1.2883376785842353 1.1567014818204837 0.09115149957623048 0.1330133445401496 0.39503988706703647 19.53634047789756 0.034984214399780396 0.07517850954729641 1.1756439539860675e-05 4.929724185259547 -0.1316361967637516 RDS(ph)ICSSVS(ph)LESSAAETQEEMLQVLK ddPTM_KYSE-520_SHP099_60min_R1 3 RDSICSSVSLESSAAETQEEMLQVLK 26 1 Q08378-4;Q08378-2;Q08378 Q08378-4 GOLGA3 Golgin subfamily A member 3 2 RDS(0.366)ICS(0.366)S(0.366)VS(0.554)LES(0.166)S(0.166)AAET(0.017)QEEMLQVLK;RDS(0.974)ICS(0.157)S(0.188)VS(0.674)LES(0.005)S(0.001)AAETQEEMLQVLK;RDS(0.433)ICS(0.341)S(0.333)VS(0.884)LES(0.004)S(0.005)AAETQEEMLQVLK 203.38 4.9481e-16 129290000.0 94034.0 106182.0 100216.0 95066.0 104842.0 89863.0 101349.0 111325.0 121106.0 105150.0 True False 88817.74656786826 101080.85733756873 106676.08371126946 104101.04405736497 113092.46893062 89302.1316840127 111594.34599092152 110938.83955845029 99116.20323381951 104218.45280546203 0.8522266851692638 0.9698940505886222 1.0235815332088545 0.9988734360860622 1.0851482236233398 0.856874471651458 1.0707733898067706 1.064483654977423 0.9510427430623388 1.0 16.669251216678767 -4.292709864827337 2.7008388516820383 1.0080619918503277 0.8276924273664569 0.3499755636246237 0.06296125119673032 0.4509115241094028 4.630140852038917 0.015855346529308152 0.17613741639666983 5.096712487931675e-05 4.292709864827337 -0.18036956448387087 RDS(ph)ICSSVSLESSAAET(ph)QEEMLQVLK ddPTM_KYSE-520_SHP099_60min_R1 1 RDSICSSVSLESSAAETQEEMLQVLK 26 1 Q08378-4;Q08378-2;Q08378 Q08378-4 GOLGA3 Golgin subfamily A member 3 2 RDS(0.405)ICS(0.281)S(0.28)VS(0.223)LES(0.244)S(0.239)AAET(0.328)QEEMLQVLK 42.865 0.047596 0.0 6983.5 6721.1 5623.2 5995.5 7379.1 7372.6 7634.0 8241.6 7059.1 5820.8 True False 6596.111333737891 6398.208267423228 5985.680469438116 6565.310517387197 7959.79318866426 7326.584868672893 8405.719220660236 8213.011813203897 5777.345385429743 5769.232240513873 1.1433256729409054 1.1090224835277789 1.0375176834456856 1.137986866134967 1.3796971341814575 1.2699410533732136 1.4569909600157693 1.4235883512417509 1.0014062780934518 1.0 12.494163624936387 -5.615590159047387 6.378044554976586 1.2866578516802163 1.096306184985203 0.17512485522870824 0.15040107694532995 0.2923837266863272 16.693296168394934 0.043741397435650906 0.0566503947800243 2.4233148348898598e-06 5.615590159047387 -0.19035166669501336 RDS(ph)ICSSVSLESSAAETQEEMLQVLK ddPTM_KYSE-520_SHP099_60min_R1 2 RDSICSSVSLESSAAETQEEMLQVLK 26 1 Q08378-4;Q08378-2;Q08378 Q08378-4 GOLGA3 Golgin subfamily A member 3 1 RDS(0.848)ICS(0.033)S(0.033)VS(0.045)LES(0.017)S(0.024)AAETQEEMLQVLK;RDS(0.586)ICS(0.121)S(0.121)VS(0.157)LES(0.007)S(0.009)AAETQEEMLQVLK 157.88 5.0557999999999995e-08 148265000.0 99924.0 120065.0 105488.0 91686.0 99413.0 115844.0 103892.0 117772.0 130687.0 115509.0 True False 94381.01652644445 114296.89717876076 112287.92526676774 100399.80987359895 107236.23751740456 115120.97462585001 114394.41724820975 117363.47642019155 106957.53515117476 114485.68012464214 0.8243914559767697 0.998351034420411 0.9808032335967112 0.8769639116812888 0.9366781714591291 1.0055491175884723 0.9992028446148634 1.0251367358119925 0.9342437852029059 1.0 16.804807631666115 -6.207962452594735 5.875874541217993 0.9947789774998731 0.9276926870109607 0.3162670838481033 0.050848181235368245 0.28888389464536723 22.83658513984009 0.016898933311599786 0.016761824778772288 6.19494631848735e-07 6.207962452594735 -0.06708629048891235 RDS(ph)IVAELDR ddPTM_KYSE-520_SHP099_60min_R1 9 RDSIVAELDR 10 1 M0QXB4;O14579-3;O14579 M0QXB4 COPE Coatomer subunit epsilon 1 RDS(1)IVAELDR;RDS(1)IVAELDR;RDS(1)IVAELDR;RDS(1)IVAELDR;RDS(1)IVAELDR;RDS(1)IVAELDR;RDS(1)IVAELDR;RDS(1)IVAELDR;RDS(1)IVAELDR 172.82 2.4325e-05 6059690000.0 5826700.0 5467790.0 5143940.0 4478320.0 4891990.0 4826820.0 4729970.0 4691990.0 5949180.0 5235060.0 True False 5503481.335761518 5205109.161079884 5475526.602994998 4903938.1863440005 5276961.781384399 4796694.025962026 5208121.527658665 4675714.581808698 4868958.878623469 5188681.441215051 1.0606704994540481 1.003166068306746 1.055282862328271 0.9451222322863645 1.017014021995668 0.9244533664874148 1.0037466332562248 0.9011373380273988 0.9383807685605937 1.0 22.30693653374448 -5.268520851573641 0.7316096239027027 0.948939485014673 1.0567119334875876 0.4159910928132293 0.03975287782462457 0.9429525015714163 0.874648295985753 0.019139615014200508 0.06817526177842431 5.388639725335058e-06 5.268520851573641 0.10777244847291467 RDS(ph)LASLFPSEEEER ddPTM_KYSE-520_SHP099_60min_R1 3 RDSLASLFPSEEEER 15 1 Q6P597;Q6P597-3;Q6P597-2;K7ENJ3;K7EL76 Q6P597 KLC3 Kinesin light chain 3 1 RDS(1)LASLFPSEEEER;RDS(0.998)LAS(0.002)LFPSEEEER;RDS(0.998)LAS(0.002)LFPSEEEER 209.25 3.3558e-14 892150000.0 357876.0 305447.0 300199.0 295336.0 266004.0 317547.0 303114.0 323879.0 366366.0 354089.0 True False 338023.90487188107 290772.86763470585 319550.3078753824 323404.64464399416 286937.0014442746 315565.0713849212 333755.72122756165 322755.53934292676 299843.16973528545 350952.0469370739 0.9631626537641741 0.8285259202002654 0.9105241318985046 0.9215066487473174 0.8175960332715277 0.8991686304126398 0.9510009248853433 0.9196570932119317 0.8543707676081675 1.0 18.420914392794987 -6.53353377549694 24.083332742306798 0.9246366616212208 0.8850633781264862 0.12673486195066241 0.05211620160173789 316.7767483272735 715992.6951963485 0.019184556039916922 0.014878748490822798 2.9272932041263265e-07 6.53353377549694 -0.03957328349473466 RDS(ph)LEEGELR ddPTM_KYSE-520_SHP099_60min_R1 3 RDSLEEGELR 10 1 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;A0A087WYI9;E7ESP2;J3KS35;A0A087X1I0;E9PFJ2;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 RDS(1)LEEGELR;RDS(1)LEEGELR;RDS(1)LEEGELR 129.17 0.0002452 2597120000.0 1947890.0 1641100.0 1632580.0 1773590.0 1768590.0 1811510.0 1753960.0 1901690.0 2017630.0 1783630.0 True False 1839836.6586775538 1562259.0926586792 1737818.7190203592 1942151.460350723 1907767.9710994202 1800203.6941444853 1931267.3938000016 1895093.4812477818 1651279.2523132723 1767828.4258431413 1.0407325913430028 0.8837164680806517 0.983024536553388 1.0986085708088107 1.0791590084255698 1.0183135805647558 1.0924518270934072 1.071989483563114 0.9340721238407045 1.0 20.75354683206446 -5.015432586580503 23.328526811590205 1.0472050466146612 0.9550110334172286 0.24393992867376946 0.058837156139347244 321.5368184810182 486053.5791673834 0.015329027212549654 0.027754791811356788 9.650891062659643e-06 5.015432586580503 -0.09219401319743259 RDS(ph)LGAYASQDANEQGQDLGK ddPTM_KYSE-520_SHP099_60min_R1 10 RDSLGAYASQDANEQGQDLGK 21 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.977)LGAY(0.023)ASQDANEQGQDLGK;RDS(0.991)LGAY(0.009)ASQDANEQGQDLGK;RDS(1)LGAYASQDANEQGQDLGK;RDS(1)LGAYASQDANEQGQDLGK;RDS(1)LGAYASQDANEQGQDLGK;RDS(1)LGAYASQDANEQGQDLGK;RDS(1)LGAYASQDANEQGQDLGK;RDS(0.999)LGAYAS(0.001)QDANEQGQDLGK;RDS(1)LGAYASQDANEQGQDLGK;RDS(1)LGAYASQDANEQGQDLGK 274.97 3.8360999999999996e-36 28227900000.0 6626200.0 5923730.0 5103590.0 5886490.0 6303110.0 6081470.0 6358470.0 6659050.0 7251510.0 5969590.0 True False 6258631.476997789 5639145.119099994 5432575.577432717 6445940.239762247 6799128.897209894 6043513.289923243 7001246.200287063 6635951.309783959 5934818.579691128 5916704.076870748 1.057790181101618 0.9530889234674129 0.9181759822448179 1.0894477999939796 1.149141280157761 1.021432407537198 1.1833017351089008 1.1215621439856782 1.0030615867525288 1.0 22.496362310025212 -5.281205494353668 23.548072046123547 1.0908032886059311 0.9740254283676524 0.33601420850392305 0.06651122096648035 372.2264089210172 443445.71503722406 0.018416618338081277 0.027370173436439802 5.233527440958202e-06 5.281205494353668 -0.11677786023827874 RDS(ph)LGAYASQDANEQGQDLGKR ddPTM_KYSE-520_SHP099_60min_R1 13 RDSLGAYASQDANEQGQDLGKR 22 2 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(1)LGAYASQDANEQGQDLGKR;RDS(0.99)LGAY(0.004)AS(0.005)QDANEQGQDLGKR;RDS(0.984)LGAY(0.016)ASQDANEQGQDLGKR;RDS(1)LGAYASQDANEQGQDLGKR;RDS(0.917)LGAYAS(0.083)QDANEQGQDLGKR;RDS(0.993)LGAYAS(0.007)QDANEQGQDLGKR;RDS(0.925)LGAYAS(0.075)QDANEQGQDLGKR;RDS(1)LGAYASQDANEQGQDLGKR;RDS(1)LGAYASQDANEQGQDLGKR;RDS(1)LGAYASQDANEQGQDLGKR;RDS(1)LGAYASQDANEQGQDLGKR;RDS(1)LGAYASQDANEQGQDLGKR;RDS(0.995)LGAYAS(0.005)QDANEQGQDLGKR 216.71 1.128e-19 32183500000.0 6157690.0 5832760.0 5845060.0 5622100.0 5900020.0 5696740.0 5149600.0 5589520.0 7531660.0 5582090.0 True False 5816110.6606493145 5552545.454448742 6221841.920026673 6156422.693654001 6364318.0074782735 5661184.532561594 5670171.823252814 5570131.25972377 6164100.401697927 5532637.0254003005 1.0512366225992396 1.0035983616776307 1.1245707772735203 1.112746537571488 1.1503227083684924 1.0232344009865697 1.0248588145618611 1.0067769192432712 1.1141342497978057 1.0 22.399535846650497 -6.346081382447404 24.99993591512377 1.0336653976533499 1.0871354101799524 0.24647412433792415 0.047786108963004434 139.267063560135 41131.656379249274 0.017793162618194167 0.015692094798783168 4.5073223390931026e-07 6.346081382447404 0.05347001252660255 RDS(ph)LGTYSSR ddPTM_KYSE-520_SHP099_60min_R1 9 RDSLGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.974)LGT(0.022)YS(0.001)S(0.003)R;RDS(0.995)LGT(0.002)YS(0.001)S(0.002)R;RDS(1)LGTYSSR;RDS(1)LGTYSSR;RDS(0.95)LGT(0.013)YS(0.032)S(0.004)R;RDS(0.498)LGT(0.498)YS(0.003)S(0.001)R;RDS(0.579)LGT(0.398)YS(0.017)S(0.006)R;RDS(0.598)LGT(0.009)YS(0.052)S(0.341)R;RDS(0.739)LGT(0.073)YS(0.171)S(0.017)R 154.94 9.6755e-05 13351170000.0 13741814.0 12730438.0 11569428.0 11777205.0 13100877.2 12900305.9 12556070.0 12880508.0 14430162.0 13103690.9 True False 12979528.183792945 12118848.64970299 12315211.840619316 12896507.022254217 14131841.70184534 12819790.305752596 13825360.091034217 12835828.524081154 11810008.33558154 12987602.39314327 0.9993783140947872 0.9331089975545499 0.9482282770776123 0.9929859747679721 1.0881024283054865 0.9870790556785701 1.0645044152516738 0.988313942445432 0.9093293725881665 1.0 23.630631787469817 -5.415735446367256 5.359575467274261 1.0102216279766236 0.9582802877873711 0.1516479334762898 0.04773570647121091 0.3924190858114975 16.270267666529335 0.013947346854614589 0.020811328877722492 3.839410547492245e-06 5.415735446367256 -0.05194134018925256 RDS(ph)LQKPGLEAPPR ddPTM_KYSE-520_SHP099_60min_R1 5 RDSLQKPGLEAPPR 14 2 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 RDS(1)LQKPGLEAPPR;RDS(1)LQKPGLEAPPR;RDS(1)LQKPGLEAPPR;RDS(1)LQKPGLEAPPR;RDS(1)LQKPGLEAPPR 93.5 0.0016258 6675790000.0 3436290.0 3437610.0 2825520.0 2955710.0 3281350.0 2983140.0 2822310.0 3108260.0 3730480.0 3135830.0 True False 3245672.1436257167 3272462.055642196 3007657.5401918422 3236619.7897333843 3539573.576672419 2964521.116720401 3107616.6378912237 3097478.1715333373 3053118.8697479824 3108048.985838825 1.0442795973982208 1.0528991243550165 0.9676995291565882 1.041367045526105 1.138840987642005 0.9538205897743638 0.9998608941012284 0.9965988907016423 0.9823264960297858 1.0 21.56757781150925 RDS(ph)LTGSSDLYK ddPTM_KYSE-520_SHP099_60min_R1 14 RDSLTGSSDLYK 12 1 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;E9PR38;Q14671-4;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 RDS(0.991)LT(0.009)GSSDLYK;RDS(0.947)LT(0.052)GS(0.001)S(0.001)DLYK;RDS(0.998)LT(0.002)GSSDLYK;RDS(0.497)LT(0.497)GS(0.001)S(0.004)DLYK;RDS(0.986)LT(0.008)GS(0.002)S(0.004)DLYK;RDS(0.951)LT(0.036)GS(0.005)S(0.007)DLY(0.001)K;RDS(0.998)LT(0.002)GSSDLYK;RDS(1)LTGSSDLYK;RDS(1)LTGSSDLYK;RDS(0.542)LT(0.061)GS(0.124)S(0.268)DLY(0.004)K;RDS(0.961)LT(0.038)GSSDLYK;RDS(0.994)LT(0.002)GS(0.002)S(0.002)DLYK;RDS(0.938)LT(0.06)GS(0.001)S(0.001)DLYK;RDS(0.795)LT(0.2)GS(0.003)S(0.003)DLYK 215.15 6.693999999999999e-11 67539760000.0 38935000.0 32894720.0 29563200.0 30017640.0 29985860.0 31812880.0 32781780.0 32837030.0 36243990.0 32501240.0 True False 36775197.935001746 31314408.275218632 31468891.17479242 32870507.48046741 32345576.585794978 31614324.01553136 36095682.241741605 32723126.007150415 29662995.052635867 32213304.299182102 1.1416152032542488 0.9720955039068658 0.9768911280421306 1.0204016072111544 1.0041061384260488 0.9814058105282311 1.1205209470752144 1.015826433179078 0.9208305604771198 1.0 24.94115331783948 -4.2527151075715794 24.32142920300391 1.0048558264465302 1.1416153060834902 0.4310247412622912 0.04819751112805276 805.8798218969002 2246551.430326753 0.012317405723569656 0.14074265326433655 5.5883666526142296e-05 4.2527151075715794 0.13675947963696 RDS(ph)PLQGSGQQNSQAGQR ddPTM_KYSE-520_SHP099_60min_R1 8 RDSPLQGSGQQNSQAGQR 18 1 O95819-3;E7EX83;G5E948;C9J840;H7C360;E7ENQ1;H7C0P6;G3XAA2;A0A0D9SG62;A0A0D9SEY1;O95819-4;O95819-2;O95819;O95819-5;O95819-6;E7EN19 O95819-3 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 RDS(1)PLQGSGQQNSQAGQR;RDS(1)PLQGSGQQNSQAGQR;RDS(1)PLQGSGQQNSQAGQR;RDS(0.988)PLQGSGQQNS(0.012)QAGQR;RDS(1)PLQGSGQQNSQAGQR;RDS(1)PLQGSGQQNSQAGQR;RDS(1)PLQGSGQQNSQAGQR;RDS(1)PLQGSGQQNSQAGQR 232.81 1.2686000000000002e-23 1849907000.0 1017871.5 996505.7 1013064.7 791632.5 901852.2 887742.8 856636.7999999999 809038.0 1035747.9 829630.4 True False 961408.1388184702 948632.0703864485 1078368.47152283 866869.0147870104 972822.8373029066 882202.0678937279 943234.0077135029 806231.6360088892 847682.1904397946 822280.5200986839 1.16919726944655 1.1536599094827162 1.3114362375912934 1.0542254055622955 1.1830790265907742 1.072872391270868 1.147095163582743 0.9804824707657326 1.0308917330767633 1.0 19.649271126147983 -6.767915466983576 0.6575019333306868 0.989573911850684 1.1934455065524971 0.5310380483497699 0.06580037717341389 0.5770196669023229 0.5001866582598272 0.05600330484465778 0.03824085817336586 1.7064145008152053e-07 6.767915466983576 0.20387159470181315 RDS(ph)PPPPAR ddPTM_KYSE-520_SHP099_60min_R1 9 RDSPPPPAR 9 1 O96013;O96013-4;O96013-2;M0R2X4 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR;RDS(1)PPPPAR 107.17 0.0008749000000000001 9849150000.0 2048599.0 1898224.0 1791706.0 1852765.0 1915313.0 1876268.0 1803452.0 1954118.0 2290003.0 1980652.0 True False 1934959.12968914 1807030.469747689 1907202.2355909613 2028851.2285458888 2066037.2364597463 1864557.5154457216 1985762.5281553764 1947339.6207525712 1874196.1814778468 1963104.96420394 0.9856625931735579 0.920496103212932 0.9715233114722177 1.0334909572034063 1.0524334022544466 0.9498002141733769 1.0115416976496845 0.9919691795707104 0.9547101228170208 1.0 20.904705882876105 -5.005815871506485 24.850730748190017 0.9997152125352297 0.9513119312072965 0.24863220234569006 0.03281235244602411 317.2460181645166 1355588.1716738027 0.008792052280170704 0.017426981878460514 9.866977287034933e-06 5.005815871506485 -0.048403281327933145 RDS(ph)PTYDPYK ddPTM_KYSE-520_SHP099_60min_R1 3 RDSPTYDPYK 10 1 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-4;Q8N2M8-3 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 1 RDS(0.96)PT(0.04)YDPYK;RDS(0.998)PT(0.002)YDPYK;RDS(0.777)PT(0.124)Y(0.098)DPY(0.001)K 136.33 0.00018098 1101500000.0 3048670.0 2654430.0 2317230.0 2704470.0 2689780.0 2622050.0 2680260.0 2891950.0 3131400.0 2617630.0 True False 2879554.197727028 2526907.198419338 2466602.353499087 2961502.015671446 2901450.3832452954 2605684.8133499403 2951206.8376168218 2881918.5004362045 2562816.6961701484 2594439.834685321 1.1098943822978606 0.9739702438410278 0.9507263650992549 1.1414803211386269 1.1183340405337292 1.0043342607195143 1.1375121512404518 1.1108056783231406 0.9878111883373052 1.0 21.30699164934901 -5.258243204222615 24.993603211693564 1.077992459700959 1.00777432601825 0.13867791753643122 0.066891079477201 482.14927782941396 3770312.377484684 0.018227529805341692 0.029834918431298915 5.5176836333749365e-06 5.258243204222615 -0.07021813368270902 RDS(ph)PTYDPYKR ddPTM_KYSE-520_SHP099_60min_R1 13 RDSPTYDPYKR 11 2 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-4;Q8N2M8-3 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 1 RDS(0.71)PT(0.28)Y(0.009)DPY(0.002)KR;RDS(0.983)PT(0.017)YDPYKR;RDS(0.996)PT(0.004)YDPYKR;RDS(1)PTYDPYKR;RDS(0.925)PT(0.075)YDPYKR;RDS(0.976)PT(0.024)YDPYKR;RDS(0.995)PT(0.005)YDPYKR;RDS(0.999)PT(0.001)YDPYKR;RDS(0.999)PT(0.001)YDPYKR;RDS(0.844)PT(0.154)Y(0.001)DPY(0.001)KR;RDS(0.981)PT(0.018)YDPYKR;RDS(0.978)PT(0.022)YDPYKR;RDS(0.957)PT(0.043)YDPYKR 128.9 9.9801e-05 65997800000.0 18253310.0 15075080.0 13712500.0 15986400.0 15631050.0 15461360.0 15854420.0 16435850.0 17604220.0 14468480.0 True False 17240762.507228643 14350850.528643616 14596429.690775732 17505742.649513595 16861124.706491355 15364859.9171397 17457139.497828152 16378837.872506244 14407737.414272375 14340300.523507103 1.2022594979071048 1.0007356892639188 1.0178607949567564 1.2207375027334741 1.1757860080304476 1.071446159161944 1.2173482326407192 1.142154437116398 1.0047026134950747 1.0 23.773571922507305 -7.76601174742549 24.582607624576085 1.002351183282666 1.128296649737668 0.3202920276761356 0.07490273086400658 125.39329735205358 674106.3870386264 0.06722012829375287 0.019654204727829853 1.7139109465384155e-08 7.76601174742549 0.12594546645500215 RDS(ph)QDGSSYR ddPTM_KYSE-520_SHP099_60min_R1 11 RDSQDGSSYR 10 1 Q14847;Q14847-2;C9J9W2;Q14847-3;J3KSN1 Q14847 LASP1 LIM and SH3 domain protein 1 1 RDS(0.999)QDGS(0.001)SYR;RDS(0.999)QDGSS(0.001)YR;RDS(0.992)QDGSS(0.007)YR;RDS(0.914)QDGS(0.084)S(0.002)YR;RDS(1)QDGSSYR;RDS(0.996)QDGS(0.001)S(0.003)YR;RDS(0.999)QDGSS(0.001)YR;RDS(0.993)QDGS(0.007)SYR;RDS(0.972)QDGS(0.011)S(0.017)YR;RDS(1)QDGSSYR;RDS(0.923)QDGS(0.044)S(0.033)YR 145.01 0.00021296 18445170000.0 5540409.0 5065825.0 4754059.0 5090217.0 4924924.0 5259094.0 5137589.0 5364210.0 5395448.0 5013334.0 True False 5233071.468238479 4822455.163041657 5060513.249903339 5573989.69325046 5312487.499815578 5226270.043584133 5656946.634156739 5345602.8075260315 4415770.651375693 4968919.761074826 1.0531607914526908 0.9705238552692009 1.018433279914486 1.121770920294505 1.069143346091472 1.0517919980365389 1.1384660864262148 1.0758078344114226 0.8886781964095388 1.0 22.244500814525924 -7.748460050849767 24.995895347139896 0.9443390940283185 1.062247474502013 0.4587622746854426 0.05128823517693159 184.94303185939762 356172.0865760544 0.03718100740358176 0.013856976490701216 1.7845961394180666e-08 7.748460050849767 0.11790838047369445 RDS(ph)QDGSSYRR ddPTM_KYSE-520_SHP099_60min_R1 1 RDSQDGSSYRR 11 2 Q14847;Q14847-2;C9J9W2;Q14847-3;J3KSN1 Q14847 LASP1 LIM and SH3 domain protein 1 1 RDS(0.825)QDGS(0.087)S(0.087)Y(0.001)RR 58.486999999999995 0.043429 0.0 34662.0 34745.0 34508.0 25769.0 34141.0 30824.0 35791.0 27211.0 43244.0 33728.0 True False 32739.229763016072 33075.798046691765 36732.440894752195 28218.078012267655 36827.7024642824 30631.615982417763 39409.10356649861 27116.61139209516 35391.979692527915 33429.19615998692 0.9793603653025704 0.989428459134828 1.098813166758676 0.8441147635504107 1.1016628185742416 0.9163132680732025 1.1788827759391158 0.8111655231648195 1.0587146494084818 1.0 15.028821043809478 -7.279387621043104 24.999606945938247 0.9512051186643354 1.0106176852555002 0.05711908524989473 0.10769108274618983 2631.641195520062 3665519.040030488 0.05383144932162131 0.02595401655147711 5.255479894239513e-08 7.279387621043104 0.059412566591164784 RDS(ph)QGTYSSR ddPTM_KYSE-520_SHP099_60min_R1 3 RDSQGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.762)QGT(0.024)YS(0.023)S(0.191)R;RDS(1)QGTYSSR;RDS(1)QGTYSSR 90.697 0.0037698000000000002 1152610000.0 408599.0 367488.0 354800.0 432677.0 409883.0 406448.0 452423.0 454670.0 449113.0 412844.0 True False 385933.1989480872 349833.3248692662 377670.97570007126 473798.491990916 442138.46018474776 403911.2072677692 498158.33206297667 453092.85589077626 367565.4004174056 409186.5233477714 0.9431718224504649 0.854948305743539 0.9229799960422578 1.157903462006813 1.080530357078672 0.9871077961296427 1.2174358236123708 1.1073015117501523 0.8982832509002463 1.0 18.64239910480962 -5.137331882695676 6.196717132531244 1.072050999914013 0.8971321025532939 0.4028254977742829 0.08744475828506054 0.21838208496711253 10.101594946297892 0.023789782808268028 0.041802384770722206 7.289002804123294e-06 5.137331882695676 -0.1749188973607192 RDS(ph)RS(ph)S(ph)EREESQSR ddPTM_KYSE-520_SHP099_60min_R1 2 RDSRSSEREESQSR 14 3 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 3 RDS(1)RS(1)S(1)EREESQSR;RDS(1)RS(1)S(1)EREESQSR 67.01899999999999 0.020597999999999998 829690000.0 965810.0 918180.0 775070.0 853090.0 779410.0 870300.0 807390.0 879790.0 1051560.0 706770.0 True False 912234.5940054981 874069.2545837226 825032.2523558465 934167.4171091389 840745.1327637254 864868.1348786058 889008.8605670512 876738.2138345289 860623.2116703974 700508.5676587401 1.3022461624622164 1.2477638317901836 1.1777618296851 1.333556019495008 1.200192505244708 1.2346289179148702 1.2690906315940178 1.2515738626363824 1.2285691444814117 1.0 19.418043170265193 -8.399382692421414 2.514838907684718 1.0000038414950683 1.2503517211064057 0.7581411740911234 0.0424467314305142 1.9289616957720266 11.566745458905881 0.03923446218586009 0.01059531612074252 3.986734437268269e-09 8.399382692421414 0.2503478796113374 RDS(ph)S(ph)RAASR ddPTM_KYSE-520_SHP099_60min_R1 1 RDSSRAASR 9 2 F8VV64;Q63HR2-2;Q63HR2-6;Q63HR2 F8VV64 TNS2 Tensin-2 2 RDS(1)S(1)RAASR 76.143 0.015762 0.0 69905.0 56526.0 65748.0 58801.0 66271.0 62417.0 52286.0 72684.0 87086.0 57146.0 True False 66027.23029783728 53810.40611274424 69986.22128051949 64389.429360834736 71486.15066958957 62027.43235058941 57571.579142185095 72431.8761685731 71273.3776594091 56639.730898915266 1.1657405367210492 0.9500469945519249 1.2356383084768474 1.1368244223432193 1.2621202384801342 1.0951222995972485 1.0164522011047845 1.2788174487947697 1.2583636350004992 1.0 15.789526790596724 -4.774198755930132 24.999480317995612 1.1656911437524724 1.0578937133730393 0.1267067708035794 0.10694760050018814 386.46804347276736 757211.3783147554 0.027610407043967333 0.058063332894682275 1.681904157365147e-05 4.774198755930132 -0.10779743037943312 RDS(ph)SDDWEIPDGQITVGQR ddPTM_KYSE-520_SHP099_60min_R1 6 RDSSDDWEIPDGQITVGQR 19 1 H7C560;A0A2U3TZI2;A0A2R8Y8E0;P15056;A0A2R8YDP5;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 RDS(0.781)S(0.219)DDWEIPDGQITVGQR;RDS(0.5)S(0.5)DDWEIPDGQITVGQR;RDS(0.913)S(0.087)DDWEIPDGQITVGQR;RDS(0.757)S(0.243)DDWEIPDGQITVGQR;RDS(0.993)S(0.007)DDWEIPDGQITVGQR;RDS(0.939)S(0.061)DDWEIPDGQITVGQR 233.65 6.230900000000001e-26 3571330000.0 2277900.0 2267080.0 1942830.0 1858880.0 2030410.0 2056240.0 1975520.0 2142100.0 2566490.0 2079110.0 True False 2151540.34611893 2158166.0738435434 2068067.9304379097 2035547.3963073485 2190191.715547395 2043406.2434365004 2175224.8408172256 2134669.555069899 2100480.1119479234 2060690.7029231023 1.0440869864977587 1.0473022811148571 1.0035799780648027 0.9877986023908936 1.0628434982700676 0.9916122980212004 1.0555804603435421 1.0359000271325811 1.0193087730091563 1.0 20.974696550744344 -5.759922948141864 24.999999800330404 1.02894139243537 1.0213704254433782 0.014214487130459585 0.026197976788647413 251.07298256369066 4139067.17276152 0.007954723790700488 0.009707957451995626 1.7381091740483446e-06 5.759922948141864 -0.00757096699199189 RDS(ph)SEGPPGSEGDGGGQSKPSNASGGVDK ddPTM_KYSE-520_SHP099_60min_R1 2 RDSSEGPPGSEGDGGGQSKPSNASGGVDK 29 2 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 RDS(0.844)S(0.156)EGPPGSEGDGGGQSKPSNASGGVDK;RDS(0.712)S(0.216)EGPPGS(0.046)EGDGGGQS(0.013)KPS(0.013)NASGGVDK 196.77 1.1699999999999999e-15 3234100000.0 1200450.0 1135420.0 1083540.0 1079380.0 1060920.0 1089240.0 1025480.0 1122340.0 1374060.0 1127150.0 True False 1133858.6454622536 1080872.7188998347 1153386.7221252976 1181963.9506725692 1144408.36819093 1082441.6491269383 1129145.5261203386 1118446.8644961244 1124565.34123381 1117164.3279094303 1.014943475311339 0.9675145293284573 1.03242351488581 1.0580036626164029 1.0243867796356172 0.9689189155838254 1.0107246516126496 1.0011480285886807 1.0066248206637867 1.0 20.091409982202723 RDS(ph)SES(ph)QLASTESDKPTTGR ddPTM_KYSE-520_SHP099_60min_R1 1 RDSSESQLASTESDKPTTGR 20 2 Q96B23;A0A087WVF1;Q96B23-2;K7EQH1 Q96B23 C18orf25 Uncharacterized protein C18orf25 2 RDS(0.851)S(0.309)ES(0.831)QLAS(0.006)T(0.002)ES(0.002)DKPTTGR 60.943000000000005 0.017588999999999997 568260000.0 146590.0 133370.0 147310.0 149860.0 141840.0 152800.0 139740.0 165910.0 182580.0 182550.0 True False 138458.36048007992 126962.70500754872 156805.8383043336 164102.64934294787 153002.00104079608 151846.31852171785 153866.28293097464 165334.4969336853 149428.07446724965 180932.74902175105 0.7652476471433869 0.7017121316842743 0.8666526051924573 0.9069814626163674 0.8456291183770317 0.8392417588452352 0.8504059312804528 0.9137897800569503 0.82587632849864 1.0 17.465094035381874 -1.0000000000000038 0.07585245299835872 1.108557492523132 0.1980778982185615 0.565139781487545 0.051062242388972875 174.968053688653 0.9749939821802496 1.8761135813152745 16.805669484880262 0.09999999999999913 1.0000000000000038 -0.9104795943045706 RDS(ph)SESQLASTESDKPTTGR ddPTM_KYSE-520_SHP099_60min_R1 13 RDSSESQLASTESDKPTTGR 20 2 Q96B23;A0A087WVF1;Q96B23-2;K7EQH1 Q96B23 C18orf25 Uncharacterized protein C18orf25 1 RDS(0.777)S(0.087)ES(0.136)QLASTESDKPTTGR;RDS(0.886)S(0.112)ES(0.002)QLASTESDKPTTGR;RDS(0.925)S(0.069)ES(0.005)QLASTESDKPTTGR;RDS(0.798)S(0.165)ES(0.037)QLASTESDKPTTGR;RDS(0.929)S(0.057)ES(0.01)QLAS(0.002)T(0.002)ESDKPTTGR;RDS(0.93)S(0.065)ES(0.005)QLASTESDKPTTGR;RDS(0.747)S(0.219)ES(0.022)QLAS(0.012)T(0.001)ESDKPTTGR;RDS(0.705)S(0.288)ES(0.005)QLAS(0.001)TESDKPTTGR;RDS(0.942)S(0.054)ES(0.003)QLAS(0.001)TESDKPTTGR;RDS(0.722)S(0.163)ES(0.031)QLAS(0.038)T(0.038)ES(0.008)DKPTTGR;RDS(0.888)S(0.112)ESQLASTESDKPTTGR;RDS(0.957)S(0.039)ES(0.003)QLASTESDKPTTGR;RDS(0.951)S(0.049)ESQLASTESDKPTTGR 253.77 3.4087e-27 46711140000.0 14154920.0 13204750.0 13242060.0 13442240.0 14511790.0 14252020.0 13457680.0 15513240.0 19185910.0 13897970.0 True False 13369718.370466556 12570373.989266159 14095664.375645136 14719786.448043184 15653785.31220961 14163067.856661605 14818113.62869985 15459428.191257447 15702232.381432533 13774844.798257042 0.9705894016430772 0.9125601176179287 1.023290249878437 1.0685990777845793 1.1364037520183397 1.0281834796754796 1.0757372475495923 1.1222941831775526 1.1399208202635698 1.0 23.71553272819517 -5.0206808590411764 2.7049162789936103 1.0866562984781558 0.9416115141527664 0.6035994906023299 0.044795303617220894 0.17043219526163988 2.4880648044339226 0.01244469018634873 0.028026277372105945 9.534965828558165e-06 5.0206808590411764 -0.14504478432538936 RDS(ph)SGGTKDGDRPK ddPTM_KYSE-520_SHP099_60min_R1 1 RDSSGGTKDGDRPK 14 3 Q9Y478;F5H4Y8 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 RDS(0.675)S(0.159)GGT(0.166)KDGDRPK 108.18 0.00044019 1063800000.0 325690.0 453200.0 309340.0 169550.0 252430.0 281040.0 144490.0 152570.0 466610.0 286320.0 True False 307623.3264530816 431427.5917329313 329280.5513614995 185663.9810229339 272294.8048697695 279285.92511350557 159096.45928650748 152040.77028010573 381885.3862808823 283783.42755358905 1.084007368242075 1.5202705649591235 1.1603233994321918 0.6542453258228884 0.9595162311525395 0.9841516381740291 0.5606263221853012 0.5357633868573762 1.3456930504117188 1.0 18.11443081547601 -5.0665994111129775 5.576133521738727 0.8420025744221976 1.3122417783556113 0.34984780655785264 0.24841061009123105 0.20547425817276682 12.334788898105915 0.06664931705600603 0.1198838911683015 8.578287330655957e-06 5.0665994111129775 0.4702392039334137 RDS(ph)STSTVSSAYTVSR ddPTM_KYSE-520_SHP099_60min_R1 2 RDSSTSTVSSAYTVSR 16 1 P10070;P10070-3;P10070-1;P10070-4;P10070-2 P10070;P10070-4 GLI2 Zinc finger protein GLI2 1 RDS(0.491)S(0.491)T(0.015)S(0.004)TVSSAYTVSR;RDS(0.25)S(0.25)T(0.25)S(0.25)T(0.001)VSSAYTVSR 283.78 3.2559999999999998e-37 510670000.0 557970.0 470310.0 447220.0 360760.0 364680.0 373720.0 392860.0 368790.0 459340.0 460040.0 True False 527018.2918143807 447715.60165029793 476048.5167773004 395046.52193355066 393378.2412546351 371387.47485560447 432574.1227441159 367510.75356623286 375935.4350190958 455964.40350570413 1.1558320951424614 0.9819091100270441 1.0440475465127947 0.8663977251211203 0.8627389292456333 0.8145097994496371 0.9487015201586989 0.8060075539682678 0.8244841749239594 1.0 18.798561674067304 -4.62480724186521 0.9295594774538034 0.8627031701284802 1.1930870343733944 0.6124024083773874 0.06830289263403107 0.8125760054852307 0.8183286319416887 0.023730870851432665 0.2427166425703839 2.3724264545380365e-05 4.62480724186521 0.33038386424491417 RDS(ph)SVIKEEIK ddPTM_KYSE-520_SHP099_60min_R1 1 RDSSVIKEEIK 11 2 H0YLF2;E5RGZ2;H0YKJ1;Q6NT76-4;Q6NT76-2;Q6NT76-3;Q6NT76;Q6NT76-5 H0YLF2 HMBOX1 Homeobox-containing protein 1 1 RDS(0.965)S(0.035)VIKEEIK 63.894 0.034436 0.0 308940.0 246390.0 268750.0 325090.0 256060.0 228780.0 217350.0 215050.0 394500.0 216920.0 True False 291802.4823433781 234553.0545610701 286074.05501520337 355986.45585812774 276210.46521789505 227352.09915836778 239321.85913158275 214304.0417430474 322868.7445357105 214998.25756120612 1.3572318476130312 1.0909532813041385 1.33058778364175 1.65576437640098 1.2847102499854581 1.057460194037362 1.113133947438863 0.996771063049378 1.501727261411854 1.0 17.713965442074834 -6.013545721671244 24.302305703063624 1.1366306771816057 1.3541016869281226 0.25244859864298397 0.18416144935767761 681.2476635862976 1222224.3231873882 0.0609720478381683 0.06363131387883583 9.692912188501287e-07 6.013545721671244 0.2174710097465169 RDS(ph)TEAPKPK ddPTM_KYSE-520_SHP099_60min_R1 11 RDSTEAPKPK 10 2 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 RDS(0.968)T(0.032)EAPKPK;RDS(0.841)T(0.159)EAPKPK;RDS(0.978)T(0.022)EAPKPK;RDS(0.974)T(0.026)EAPKPK;RDS(0.938)T(0.062)EAPKPK;RDS(0.974)T(0.026)EAPKPK;RDS(0.977)T(0.023)EAPKPK;RDS(0.922)T(0.078)EAPKPK;RDS(0.987)T(0.013)EAPKPK;RDS(0.962)T(0.038)EAPKPK;RDS(0.982)T(0.018)EAPKPK 178.67 1.421e-05 68056800000.0 49228000.0 46642700.0 38517800.0 43203480.0 46745800.0 48238800.0 47131500.0 45505200.0 53129300.0 43052400.0 True False 46497224.70641493 44401914.67987992 41000719.01865906 47309525.749600045 50424428.51278086 47937723.75592565 51896011.97911293 45347353.08219353 43482358.40066188 42670989.23026037 1.0896683096683675 1.0405644556370408 0.9608570074954619 1.1087046867910488 1.1817028248555834 1.1234265860874475 1.2161895684928388 1.062720923517639 1.0190145385667815 1.0 25.346752220755906 -3.102658069966358 10.204356706123521 1.0861868405741322 1.1150666548245263 0.0 0.07629540822743802 0.0 0.0 0.018726887543874887 0.0 0.0007894814498941051 3.102658069966358 0.028879814250394098 RDS(ph)TEITSILLK ddPTM_KYSE-520_SHP099_60min_R1 4 RDSTEITSILLK 12 1 Q8IYU2-3;Q8IYU2-4;Q8IYU2 Q8IYU2-3 HACE1 E3 ubiquitin-protein ligase HACE1 1 RDS(0.952)T(0.047)EIT(0.001)SILLK;RDS(0.825)T(0.175)EITSILLK;RDS(0.935)T(0.065)EITSILLK;RDS(0.59)T(0.41)EITSILLK 203.06 1.4671000000000001e-08 877550000.0 1486090.0 1376880.0 1202557.0 1278899.0 1445558.0 1470533.0 1380337.0 1414946.0 1511540.0 1419880.0 True False 1403653.6252530322 1310732.6180609867 1280075.7483792296 1400445.1764449957 1559315.190500077 1461354.8580804805 1519874.934750913 1410037.8825768798 1237082.4388225793 1407300.967849923 0.9974082710946591 0.9313804566364552 0.9095962964730505 0.9951284113622109 1.1080182747848184 1.0384096163261658 1.0799928156611593 1.0019447970188908 0.8790461081772694 1.0 20.424499468183864 -5.513996780732529 24.707550642223843 1.0248058500503756 0.9459383416663131 0.21434071077425942 0.06059757540899417 531.4961097005898 1478500.3130752498 0.01844917007231032 0.025148584764168026 3.0619861309991274e-06 5.513996780732529 -0.07886750838406253 RDS(ph)VLTSK ddPTM_KYSE-520_SHP099_60min_R1 2 RDSVLTSK 8 1 O75937 O75937 DNAJC8 DnaJ homolog subfamily C member 8 1 RDS(1)VLTSK;RDS(0.989)VLT(0.011)SK 143.73 0.00058198 1262440000.0 1800990.0 1742950.0 1829320.0 1956100.0 1876920.0 1859050.0 1954070.0 2136060.0 2460390.0 2205950.0 True False 1701085.4945154428 1659216.065778714 1947240.894215486 2142007.155877088 2024622.9257860337 1847446.9793704173 2151606.4654854 2128650.506420153 2013645.1973845803 2186406.9992031315 0.7780278306534093 0.7588779519931284 0.8906122670322528 0.9796927821113701 0.9260045940778353 0.8449693858662851 0.9840832316533861 0.9735838328344043 0.9209836952216505 1.0 21.060130552711527 -4.875347226032848 3.678599197075936 0.94211910698484 0.7672864325874014 0.7312863786045909 0.042600971732040395 0.11511855427181564 2.938292116352133 0.011723699210371042 0.027644081190313027 1.3324556845575347e-05 4.875347226032848 -0.17483267439743866 RDS(ph)YRDR ddPTM_KYSE-520_SHP099_60min_R1 3 RDSYRDR 7 2 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 RDS(1)YRDR;RDS(1)YRDR;RDS(0.999)Y(0.001)RDR 89.88600000000001 0.0056827 462910000.0 149883.0 164197.0 146838.0 145818.0 232516.0 329271.0 257731.0 327252.0 394367.0 456700.0 True False 141568.69120564696 156308.72965527818 156303.41242910692 159676.49887821954 250813.6863649306 327215.897552124 283784.9646921642 326116.83919319103 322759.8939830531 452653.9933072236 0.3127525511733683 0.3453161398472164 0.3453043930687722 0.3527561917913856 0.5540958216946499 0.7228830461902879 0.6269357365407241 0.7204550142383263 0.7130388746266748 1.0 18.788049156325343 -6.254286163493261 0.24835607182404232 1.0402342318591027 0.06660539243804109 0.9201752774234802 0.06119964495011382 0.9988041989248528 0.13686875863781797 0.13356131357067855 0.3202808365346247 5.568187313720229e-07 6.254286163493261 -0.9736288394210616 down RDS(ph)YYDR ddPTM_KYSE-520_SHP099_60min_R1 2 RDSYYDR 7 1 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RDS(0.988)Y(0.006)Y(0.006)DR;RDS(0.999)YYDR 77.533 0.019448 719610000.0 638050.0 654750.0 678000.0 682900.0 739920.0 774740.0 827950.0 1052760.0 1146520.0 886070.0 True False 602656.0945788588 623294.8272002131 721704.9648383557 747802.6106786288 798147.4944310893 769904.5602847886 911647.2660133131 1049108.2212760318 938340.8694171929 878220.1091520287 0.6862244308670608 0.7097250685845028 0.8217814159769158 0.8514979364349498 0.9088239794483253 0.8766646906185912 1.038062390638675 1.1945846039542471 1.06845750813337 1.0 19.74422304356508 -5.947174968248024 0.6282640287847567 1.1055794029732413 0.6862976100999898 0.818720456194091 0.06496140041827002 0.35634073795627336 0.30777222409440524 0.05013273023113384 0.07684416770230033 1.1293408349857886e-06 5.947174968248024 -0.4192817928732515 RDSAS(ph)YR ddPTM_KYSE-520_SHP099_60min_R1 3 RDSASYR 7 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 1 RDS(0.033)AS(0.967)YR;RDS(0.446)AS(0.505)Y(0.05)R;RDS(0.301)AS(0.699)YR 107.08 0.0037927 936770000.0 585950.0 492740.0 546850.0 522180.0 846110.0 783450.0 796450.0 873520.0 1097600.0 1045190.0 True False 553446.1854376345 469068.0307821814 582100.8259909363 571807.8302008586 912694.0432926399 778560.1979439782 876962.9386029396 870489.9630011006 898303.5082443493 1035930.4297455152 0.5342503410905625 0.4527987761662835 0.5619111180409423 0.5519751266900499 0.8810379703942577 0.7515564516578955 0.846546170883669 0.84029770533427 0.8671465597019145 1.0 19.98249568814854 -5.7258044536226915 5.832433541311321 0.8502948456261398 0.5192989038741485 0.8711947570731633 0.06378076061423898 0.06153067646368947 5.513798565867029 0.018658683001384402 0.023653320549379703 1.8801631926088766e-06 5.7258044536226915 -0.3309959417519913 RDSASYR ddPTM_KYSE-520_SHP099_60min_R1 5 RDSASYR 7 1 A0A1X7SBZ2;A0A5H1ZRQ2;Q92841;Q92841-1;Q92841-3;Q92841-2 A0A1X7SBZ2 DDX17 Probable ATP-dependent RNA helicase DDX17 0 ;;;; 135.0 0.0044873000000000005 990534000.0 280297.0 266569.0 145307.0 143512.0 282477.0 302364.0 163540.0 190795.0 205933.0 273675.0 False True 264748.36665178346 253762.6251117736 154673.72171942028 157151.33733154394 304706.33282572584 300476.8341197687 180072.21919659092 190133.176676888 168540.75834847274 271250.45241592836 0.9760292168870753 0.9355288547967493 0.570224751117641 0.5793588026558282 1.1233394455633832 1.1077468496127165 0.6638596086854553 0.700950634306566 0.6213473815337154 1.0 18.049266018252627 -4.549775113271326 24.992620756308273 0.7927163507362209 0.9659046280891577 0.09390111618235275 0.20026011837657473 471.1033174675536 437756.8292985471 0.05514438089128223 0.14590574046817964 2.8198427265741108e-05 4.549775113271326 0.17318827735293674 RDSFIGT(ph)PYWMAPEVVMCETSK ddPTM_KYSE-520_SHP099_60min_R1 1 RDSFIGTPYWMAPEVVMCETSK 22 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 RDS(0.345)FIGT(0.359)PY(0.296)WMAPEVVMCETSK 65.598 0.020819999999999998 29639000.0 73049.0 78211.0 68814.0 57297.0 64354.0 66482.0 58728.0 66117.0 82829.0 67216.0 True False 68996.82635042869 74453.62616289554 73249.86054629285 62742.4896530288 69418.2936758277 66067.0611777543 64664.79937004642 65887.65555882374 67789.34154917201 66620.5185332567 1.0356693083375768 1.1175780045261667 1.0995090125233236 0.9417892720499915 1.0419956974843172 0.9916923889563224 0.9706438916077484 0.9889994405542322 1.0175444899206516 1.0 16.02367896265878 -5.245559631001464 24.98853446062397 0.9938052895688118 1.0875847079876304 0.6361086220444536 0.03151335404484583 485.41172437985034 763847.810828923 0.008273836086825427 0.014268691323646108 5.681203801770101e-06 5.245559631001464 0.09377941841881865 RDSICSS(ph)VS(ph)LESSAAETQEEMLQVLK ddPTM_KYSE-520_SHP099_60min_R1 1 RDSICSSVSLESSAAETQEEMLQVLK 26 1 Q08378-4;Q08378-2;Q08378 Q08378-4 GOLGA3 Golgin subfamily A member 3 2 RDS(0.237)ICS(0.486)S(0.454)VS(0.76)LES(0.033)S(0.03)AAETQEEMLQVLK 108.04 0.00058179 61502000.0 63275.0 69621.0 59496.0 59076.0 74577.0 71491.0 61648.0 76203.0 97420.0 65392.0 True False 59765.00961441466 66276.30265674848 63331.207356965824 64690.565278152964 80445.78561491435 71044.79815076002 67879.98146650015 75938.66957891388 79730.98375834971 64812.67775420617 0.9221191236854285 1.0225823859352474 0.9771422744966867 0.9981159168192942 1.241204474223311 1.0961558851215556 1.0473256748305684 1.1716638196450024 1.2301757390848642 1.0 15.983988420192922 -5.6308139921438745 8.373218483498633 1.1335230350280532 0.980356780595613 0.5035974873273099 0.073660520154095 0.21053128141499947 14.929562501642451 0.021583404690734158 0.027874439790477473 2.3398391746637338e-06 5.6308139921438745 -0.15316625443244014 RDSLGTYS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 RDSLGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.285)LGT(0.029)YS(0.532)S(0.154)R 144.28 0.00021972 1137500000.0 1287800.0 1111900.0 975380.0 1065500.0 1078600.0 1112800.0 1035000.0 1257900.0 1297000.0 1169100.0 True False 1216363.1668343456 1058482.6550040748 1038254.5554631794 1166764.7996457436 1163479.6836054886 1105854.6024277995 1139627.900626584 1253536.6384960655 1061497.4947092957 1158742.6835460379 1.0497267288989258 0.9134751571978494 0.8960182188903794 1.0069231212534226 1.004088051753608 0.9543573548560516 0.9835038588024064 1.081807597403709 0.9160769770393302 1.0 20.144128798837183 -5.311821358706472 24.99686779125532 0.9943344976230961 0.949113300958931 0.09569203296256856 0.05476239001141891 735.9405556198438 365133.14956354914 0.015183139561929817 0.022520279638616025 4.877290697524713e-06 5.311821358706472 -0.04522119666416513 RDSLGTYSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RDSLGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.041)LGT(0.055)YS(0.144)S(0.76)R 66.953 0.029431 3451700000.0 4972700.0 4307000.0 4031500.0 3999100.0 3692300.0 4128900.0 4088100.0 4947600.0 4765200.0 4515500.0 True False 4696854.41816831 4100085.2550612036 4291376.940628069 4379173.261626737 3982863.0036867675 4103130.003562315 4501365.04401115 4930437.930378519 3899959.8009165195 4475496.183005845 1.0494600433361996 0.9161185905218431 0.9588605967139677 0.9784777111988474 0.8899265781546899 0.9167989058157479 1.0057801101704729 1.1016516892808799 0.8714027766854708 1.0 22.093616207249454 -6.7828961510236025 24.399079618580096 1.003179659257358 0.9487413988950215 0.08610385719432267 0.06614635927934717 381.63503634175675 433962.32780691754 0.026849514329541257 0.018123589310986742 1.6485565490615634e-07 6.7828961510236025 -0.054438260362336566 RDSPT(ph)YDPYK ddPTM_KYSE-520_SHP099_60min_R1 1 RDSPTYDPYK 10 1 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-4;Q8N2M8-3 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 1 RDS(0.359)PT(0.641)YDPYK 133.88 4.45e-05 0.0 351320.0 304250.0 261260.0 310990.0 315910.0 313830.0 315560.0 332410.0 333070.0 315280.0 True False 331831.5792609426 289633.37331143924 278101.23763077974 340546.39609744726 340770.31971797685 311871.27056067204 347459.88436881604 331256.9472950773 272592.88401143026 312486.86448412813 1.0619056894079366 0.9268657541480446 0.8899613687438855 1.0897942755438423 1.0905108612502503 0.9980300166393479 1.1119183679685976 1.0600667898215048 0.8723338962149426 1.0 18.25343602119746 -3.9195098477028405 19.707904285915312 1.0102204889491482 3.0558849730139603 0.0387407894698123 0.08141356768326116 1507.013773273319 377820.61311518314 0.02054410835134149 3262.9268851354796 0.00012036220971415873 3.9195098477028405 2.045664484064812 RDSQGTYSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 RDSQGTYSSR 10 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RDS(0.088)QGT(0.01)YS(0.088)S(0.815)R;RDS(0.035)QGT(0.01)YS(0.088)S(0.867)R 109.72 0.00072768 596410000.0 358081.0 296797.0 315974.0 357977.0 381140.0 349710.0 358460.0 401640.0 393550.0 376590.0 True False 338217.533113224 282538.42661862035 336342.1896162752 391999.0264502903 411133.54961004655 347527.330171662 394696.63503246865 400246.80458348076 322091.2405881597 373253.705582587 0.9061330887132726 0.7569608081388631 0.9011087755747822 1.0502213925470478 1.1014855136356527 0.9310753650234486 1.057448671317041 1.072318368437259 0.8629284472485781 1.0 18.509797057634096 -5.068400744084592 4.378597559561856 1.015329043739418 0.8300030029963583 0.4917741560343515 0.07462206935554508 0.161958967315822 5.986823630662649 0.01991207710804881 0.03724937735456295 8.542780662535306e-06 5.068400744084592 -0.1853260407430597 RDSS(ph)DDWEIPDGQITVGQR ddPTM_KYSE-520_SHP099_60min_R1 3 RDSSDDWEIPDGQITVGQR 19 1 H7C560;A0A2U3TZI2;A0A2R8Y8E0;P15056;A0A2R8YDP5;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 RDS(0.036)S(0.964)DDWEIPDGQITVGQR;RDS(0.392)S(0.608)DDWEIPDGQITVGQR;RDS(0.102)S(0.898)DDWEIPDGQITVGQR 272.64 2.0225e-35 1922190000.0 1085630.0 1023620.0 962730.0 812460.0 956000.0 983520.0 965100.0 992330.0 1256520.0 986770.0 True False 1025407.9397502497 974443.7587150563 1024789.1162224638 889675.9541249931 1031231.7611040688 977381.4868617791 1062661.7264683254 988887.8388415637 1028367.6422915354 978027.9854954428 1.0484443747596912 0.9963352513082019 1.0478116489717144 0.9096630846144009 1.0543990319271637 0.9993389773674665 1.0865350912530478 1.0111038267893935 1.0514705688821286 1.0 19.899516221779805 RDSSESQLAS(ph)TESDKPTTGR ddPTM_KYSE-520_SHP099_60min_R1 1 RDSSESQLASTESDKPTTGR 20 2 Q96B23;A0A087WVF1;Q96B23-2;K7EQH1 Q96B23 C18orf25 Uncharacterized protein C18orf25 1 RDS(0.05)S(0.085)ES(0.03)QLAS(0.573)T(0.099)ES(0.162)DKPTTGR 142.25 1.5861000000000002e-06 6863800000.0 1779000.0 1644800.0 1695700.0 1757200.0 1629000.0 1749900.0 1392200.0 1697500.0 2276800.0 1703900.0 True False 1680315.3236514218 1565781.3391048661 1805007.53521593 1924203.7596785543 1757193.0322578736 1738978.2250075527 1532937.1625626385 1691611.7686994805 1863390.5134573032 1688804.7716141406 0.9949731028089146 0.9271535499087381 1.06880769497751 1.1393879221690153 1.0404950659740073 1.0297094455420426 0.9077053714725559 1.0016621205319411 1.1033782855056096 1.0 20.687571129373854 -4.761693882812661 24.99997805366277 1.0354427734703577 0.9610633242124671 0.1943574265003618 0.061323213999867766 11.457178980889017 1125985.3629384078 0.01737397588424819 0.04020419997872049 1.7310360688952493e-05 4.761693882812661 -0.07437944925789064 RDSST(ph)STVSSAYTVSR ddPTM_KYSE-520_SHP099_60min_R1 1 RDSSTSTVSSAYTVSR 16 1 P10070;P10070-3;P10070-1;P10070-4;P10070-2 P10070;P10070-4 GLI2 Zinc finger protein GLI2 1 RDS(0.177)S(0.235)T(0.56)S(0.028)TVSSAYTVSR 230.82 7.266299999999999e-19 386860000.0 430170.0 383000.0 318130.0 228870.0 189830.0 279030.0 288530.0 265570.0 343190.0 329950.0 True False 406307.61257736484 364600.10510528006 338637.16882599687 250621.73598772535 204768.54101504743 277288.47026907693 317697.42818143766 264648.79965450394 280875.3471158697 327026.899697216 1.2424287205534235 1.1148933174697615 1.035502489671432 0.7663642844664099 0.6261519807839546 0.8479072226957772 0.9714718528524222 0.809256975189301 0.8588753627787911 1.0 18.319049784360924 -4.959509365426699 2.467521283566345 0.8301604695528905 1.190866939672024 0.6416527961591225 0.10280806358323125 0.18375781571193778 2.2318499763089026 0.03057295671030282 0.07685467922503356 1.0977176180762376e-05 4.959509365426699 0.3607064701191335 RDT(ph)DSDTQDANDSSCK ddPTM_KYSE-520_SHP099_60min_R1 1 RDTDSDTQDANDSSCK 16 1 Q9Y2H0-3;Q9Y2H0;F8WF49;A0A0B4J2C2;Q9Y2H0-1;A0A087X246;A0A087WWE6 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 RDT(0.5)DS(0.5)DTQDANDSSCK 104.21 0.010586 0.0 192620.0 186490.0 157190.0 155640.0 157400.0 170670.0 163590.0 148500.0 198310.0 169520.0 True False 181934.98462154958 177530.74047280327 167322.7189128925 170431.97880512782 169786.48451650652 169604.78522317804 180127.27368454385 147984.88816016042 162301.9029882806 168018.18468456424 1.0828291292583156 1.056616227619039 0.9958607708268162 1.0143662671102847 1.010524455047899 1.009443028691165 1.0720701096890977 0.8807670933832897 0.9659781963064573 1.0 17.358257859431795 -7.2530873508243054 24.999679862334073 0.9425294819304203 1.031228488806919 0.5018696047797259 0.038834231460456045 472.9370358000032 1415621.469320178 0.018520647623947346 0.010458336778063158 5.583578794109166e-08 7.2530873508243054 0.08869900687649868 RDT(ph)PTESSCAVAAIGTLEGSPPGISTSFFR ddPTM_KYSE-520_SHP099_60min_R1 1 RDTPTESSCAVAAIGTLEGSPPGISTSFFR 30 1 O94851-2;O94851-6;O94851-4 O94851-2 MICAL2 Protein-methionine sulfoxide oxidase MICAL2 1 RDT(0.491)PT(0.139)ES(0.185)S(0.185)CAVAAIGTLEGSPPGISTSFFR 105.54 0.0019135 76642000.0 99822.0 115220.0 98152.0 100010.0 103850.0 106460.0 99332.0 112680.0 135000.0 87820.0 True False 94284.67466977637 109684.65825125418 104479.03496875254 109514.92033089709 112022.40417432804 105795.54365066816 109373.44794689832 112289.13937970962 110487.40307305678 87041.98312292622 1.0832091743201848 1.2601351016595121 1.20032921149327 1.2581850321152859 1.2869927838859425 1.2154541964106789 1.2565596970881763 1.290057226995021 1.269357603181208 1.0 16.40942380618617 -4.256274919309279 24.09997435637561 1.2380872109176289 1.0832090665193213 0.20688230343267244 0.08119432378793089 446.28387673756924 2082471.7288861158 0.018310143915690278 0.14810981557967856 5.542747320602407e-05 4.256274919309279 -0.1548781443983076 RDTDS(ph)DTQDANDSSCK ddPTM_KYSE-520_SHP099_60min_R1 1 RDTDSDTQDANDSSCK 16 1 Q9Y2H0-3;Q9Y2H0;F8WF49;A0A0B4J2C2;Q9Y2H0-1;A0A087X246;A0A087WWE6 Q9Y2H0-3 DLGAP4 Disks large-associated protein 4 1 RDT(0.002)DS(0.997)DT(0.001)QDANDSSCK 202.61 7.102e-13 379870000.0 499720.0 472660.0 453520.0 463340.0 519380.0 521030.0 444040.0 475440.0 558960.0 546710.0 True False 471999.5354328776 449952.70412287605 482754.6248576561 507375.69429174927 560252.2511320406 517778.058503735 488927.89661278145 473790.8096085304 457466.9542349321 541866.5747339434 0.8710622825639862 0.8303754560683189 0.8909105070647486 0.936348019880855 1.0339302648574042 0.9555452996117432 0.9023031118921574 0.8743680302501806 0.8442427999172092 1.0 19.047578131059073 -5.030697954502052 3.6395681363443093 0.9331660642122164 0.8512926704186188 0.290191069007507 0.053249862693941524 0.3208839249271615 8.962826434281348 0.016169691137596955 0.032827713903481985 9.317556726984902e-06 5.030697954502052 -0.08187339379359759 RDVDFELIK ddPTM_KYSE-520_SHP099_60min_R1 2 RDVDFELIK 9 1 B7ZAR1;E9PCA1;P48643;E7ENZ3;P48643-2 B7ZAR1 CCT5 T-complex protein 1 subunit epsilon 0 ; 177.78 9.5801e-05 851550000.0 944020.0 884380.0 642130.0 616340.0 942730.0 860140.0 688690.0 814020.0 751530.0 790750.0 False True 891653.3287427865 841893.0573185574 683522.7272443267 674916.7682906215 1016917.4876000393 854771.5472072662 758309.5061666879 811196.3546136958 615071.0965295883 783744.5701941901 1.1376835804066363 1.074193161057511 0.8721243543351997 0.8611437883689527 1.2975113656584254 1.0906251599235675 0.967546742912426 1.0350264428788372 0.7847851454679817 1.0 19.580024017351743 -7.6816757092715555 11.172560243352887 0.8926326510261722 1.0391898611375823 0.17525839848153502 0.12969829976777003 0.7777451448970917 103.66882995181304 0.09163722649103061 0.03455459325973018 2.0812501911057993e-08 7.6816757092715555 0.1465572101114101 RDVQEIFR ddPTM_KYSE-520_SHP099_60min_R1 1 RDVQEIFR 8 1 Q13838-2;Q13838;Q5STU3;A0A0G2JJZ9;F6WLT2;F6TRA5;A0A140T9X9;F6S4E6;A0A0A0MT12;F6UJC5;A0A140T996;A0A140TA18;A0A140T9X3;A0A140T9L4;A0A140T973;A0A140T9K1;O00148;K7EQN7;O00148-3;O00148-2 Q13838-2;O00148 DDX39B;DDX39A Spliceosome RNA helicase DDX39B;ATP-dependent RNA helicase DDX39A 0 185.81 0.06354800000000001 0.0 91433.0 89073.0 59611.0 54319.0 86294.0 85504.0 64967.0 72626.0 75365.0 71954.0 False True 86361.02922283324 84793.79937870114 63453.62044097231 59481.461428397146 93084.84685430377 84970.3378199017 71534.4983768186 72374.0773570359 61680.61579704394 71316.54353936494 1.2109536572697768 1.1889779729986085 0.8897461555459079 0.8340485738146419 1.3052349740270752 1.1914533936014469 1.0030561609780395 1.014828730686972 0.8648850986867835 1.0 16.121949161880597 -7.191768205448078 2.456677413243623 0.9452786340361684 1.093016440118772 0.16873156238217368 0.14209638953515555 0.6339048030113353 7.3748104763845435 0.09605703517556857 0.044753609034408476 6.430308284542305e-08 7.191768205448078 0.14773780608260367 RDVY(ph)LSPR ddPTM_KYSE-520_SHP099_60min_R1 1 RDVYLSPR 8 1 P38159;P38159-2;H3BT71;H3BUY5;H0Y6E7;Q96E39 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 RDVY(0.553)LS(0.447)PR 85.676 0.019512 751840000.0 586290.0 524470.0 580310.0 523780.0 555980.0 539700.0 507320.0 482200.0 662560.0 541360.0 True False 553767.3249598604 499273.67395448097 617717.7111288292 573559.8937198002 599732.4629065277 536331.5321084496 558604.8565660667 480527.36074632645 542255.8057784035 536563.9715717074 1.0320620733027617 0.9305016743707272 1.151247090480946 1.0689496949258892 1.1177277914314423 0.999566800091745 1.0410778325831251 0.8955639703850445 1.0106079321539678 1.0 19.033390660269195 -7.102568757771588 8.641250731830851 0.9648231311918708 1.050430691393363 0.24957762785715154 0.06362132001417425 0.4613521134075727 35.4574858207102 0.030517078543189163 0.017597658030270802 7.896438226035024e-08 7.102568757771588 0.08560756020149218 RDVYLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 RDVYLSPR 8 1 P38159;P38159-2;H3BT71;H3BUY5;H0Y6E7;Q96E39 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 1 RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR;RDVYLS(1)PR 140.78 0.00039912 11671720000.0 11914130.0 11132930.0 9975820.0 10082010.0 10770610.0 10413080.0 9369230.0 10247710.0 12652280.0 10498840.0 True False 11253229.45867068 10598087.331931394 10618877.319076352 11040201.199133158 11618195.730612021 10348088.105184093 10316363.20327305 10212163.085843496 10354944.890023518 10405828.44557392 1.081435228105956 1.0184760768797076 1.0204739944173356 1.0609632146904233 1.116508482854508 0.9944511539189955 0.9914023911917438 0.9813887610445088 0.9951100908671962 1.0 23.310888492018375 -6.469701655937615 22.92405357777318 0.9907818451694664 1.055222302464357 0.6070001218481057 0.02688145207036744 99.59074832497097 42932.26626761814 0.010048744776717591 0.008862015939752275 3.3907700937009616e-07 6.469701655937615 0.06444045729489056 RDWGDHGR ddPTM_KYSE-520_SHP099_60min_R1 9 RDWGDHGR 8 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 0 ;;;;;;;; 148.52 0.0011026 7899540000.0 1868210.0 2241510.0 1841122.0 1800030.0 2310350.0 2181580.0 2035540.0 2119700.0 2422240.0 1196401.0 False True 1764576.6671156946 2133824.4950248944 1959803.6700193544 1971104.3100012476 2492161.4009066764 2167963.9500039895 2241312.248155979 2112347.255441697 1982422.27570134 1185801.8179258925 1.4880873350338994 1.7994781781977747 1.6527244606921607 1.6622544173940819 2.1016677181906847 1.828268364266817 1.8901238084423744 1.7813661806797039 1.6717989850688801 1.0 20.177431482929293 -8.307685431610606 2.443806156846403 1.0000753609709294 1.784493384649411 0.6951119861943837 0.15304798818282528 1.0999540187155885 7.9703144545333275 0.15227889974657982 0.04125790647222795 4.923960590991745e-09 8.307685431610606 0.7844180236784817 RDWIWNQMHIDEEK ddPTM_KYSE-520_SHP099_60min_R1 1 RDWIWNQMHIDEEK 14 1 H3BR64;H3BR11;H3BPG1;I3L1J2;P33151-2;P33151 H3BR64 CDH5 Cadherin-5 0 73.499 0.039167 0.0 760890.0 624110.0 549610.0 471960.0 462340.0 551970.0 435250.0 469840.0 553550.0 582280.0 False True 718681.9149033899 594126.8187917919 585038.740007092 516814.93650005176 498723.52764524525 548524.9504871245 479249.31763064774 468210.23470148083 453039.273859931 577121.4522069846 1.245287126574589 1.0294658369044793 1.0137185817124466 0.8955046368900113 0.8641569737843986 0.9504497682238227 0.8304132792117472 0.8112854459160829 0.784998152689442 1.0 19.138515432923718 -2.4941886268448976 0.548899181867364 0.8528925710570625 3.8227872592777703 0.7647265340152232 0.06335769060501727 10.767690517335716 0.5207466982441882 0.03114873775595603 31.019951794643173 0.0032048770499726598 2.4941886268448976 2.969894688220708 RDYDDMS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 21 RDYDDMSPR 9 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 1 RDYDDMS(1)PR;RDYDDMS(1)PR;RDY(0.095)DDMS(0.905)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDY(0.013)DDMS(0.987)PR;RDY(0.006)DDMS(0.994)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR;RDYDDMS(1)PR 162.93 0.0001353 54926910000.0 53685900.0 49803120.0 43655260.0 43729650.0 45723400.0 45225660.0 39601620.0 44387030.0 55472550.0 44207120.0 True False 50707836.106811576 47410503.359192856 46469347.91048567 47885702.78820134 49321571.449441105 44943389.88033322 43604938.22416596 44233061.75294067 45400133.26918741 43815479.30941892 1.157304151546986 1.0820491777434722 1.0605692016359218 1.0928946468904075 1.1256654549215113 1.0257422853450753 0.9951948240993521 1.0095304775869927 1.0361665325758025 1.0 25.38493730521868 -6.3642040384840755 5.27803825382842 1.0111787787744724 1.0992885321244346 0.7455762140009738 0.026410256900403217 0.12656105858851058 5.281305431843046 0.00976858000233933 0.008573998364050322 4.3231067685542736e-07 6.3642040384840755 0.08810975334996218 RDYYDR ddPTM_KYSE-520_SHP099_60min_R1 7 RDYYDR 6 1 P62995;P62995-3;H7C2L4;H7BXF3 P62995 TRA2B Transformer-2 protein homolog beta 0 ;;;;;; 125.01 0.018945 12281610000.0 5175760.0 5429720.0 3962880.0 3556390.0 5325090.0 5616570.0 4568870.0 4764410.0 4861320.0 4358740.0 False True 4888650.275178243 5168868.101024119 4218333.585632189 3894388.2363323565 5744144.287382498 5581514.903269148 5030735.967474179 4747883.373731649 3978626.8319045394 4320124.954648411 1.131599276988066 1.1964626382999568 0.9764378646254906 0.9014526841734135 1.3296245705119842 1.2919799686033375 1.1644885322266334 1.0990152885793207 0.9209517950686998 1.0 22.042641610612108 -7.643073333193151 4.812374843074928 0.9625380972498312 1.1405933127508097 0.2528720257640389 0.12247774974155991 0.3265287307898601 11.956932655971979 0.09995120967498133 0.03476586520145598 2.274713299540619e-08 7.643073333193151 0.17805521550097847 REAALPPVS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 4 REAALPPVSPLK 12 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 REAALPPVS(1)PLK;REAALPPVS(1)PLK;REAALPPVS(1)PLK;REAALPPVS(1)PLK 106.36 0.00039605 4590830000.0 2461970.0 2260110.0 2269550.0 2089230.0 2212700.0 2579110.0 2673770.0 2859790.0 3377560.0 2940680.0 True False 2325399.6162844794 2151530.923105729 2415848.8244083943 2287789.7910500932 2386826.9014591747 2563012.817817725 2944060.7650805204 2849870.055970005 2764280.245358766 2914627.8630144172 0.7978375715791943 0.7381837490843633 0.8288704211829749 0.7849337543503668 0.818913087240794 0.8793619419965886 1.0100983396335417 0.9777817923632154 0.9484161873412696 1.0 21.474880262541934 -6.464462356166307 2.176662927765967 0.9829182569611946 0.7891462813349589 0.9097355038875155 0.028150111434075222 0.08644346409362187 0.813792122640853 0.011928917862741487 0.009586014488710251 3.4319238578162074e-07 6.464462356166307 -0.19377197562623572 REAEALLQSMGLTPESPIVPPPMS(ph)PSSK ddPTM_KYSE-520_SHP099_60min_R1 3 REAEALLQSMGLTPESPIVPPPMSPSSK 28 1 E9PGG1;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ETL8 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 REAEALLQSMGLTPES(0.026)PIVPPPMS(0.553)PS(0.21)S(0.21)K;REAEALLQSMGLTPESPIVPPPMS(0.924)PS(0.06)S(0.016)K;REAEALLQSMGLTPESPIVPPPMS(0.934)PS(0.053)S(0.013)K 160.58 3.712e-10 1103341000.0 719235.0 827205.0 636306.0 515254.0 641090.0 841685.0 646813.0 855835.0 985517.0 831606.0 True False 679337.600790573 787464.8301399811 677323.3028855975 564223.5852432359 691540.1356968699 836431.7317078015 712199.1703265538 852866.3081383902 806571.9556618504 824238.6178196772 0.8242001601278953 0.9553845368505395 0.8217563315309 0.6845391286515453 0.8390047745229059 1.0147931844304725 0.8640691602275363 1.034732284680425 0.9785660829571906 1.0 19.652702533822936 -6.206747513841719 7.009240345314603 0.973346028378658 0.8235656040436905 0.5163897347742503 0.0741997514625795 0.23638793487753434 25.824009066788452 0.026126972116139655 0.02602874899955168 6.212300943418213e-07 6.206747513841719 -0.14978042433496752 REALEK ddPTM_KYSE-520_SHP099_60min_R1 1 REALEK 6 1 O43707;O43707-2;F5GXS2;O43707-3;Q4VCS5;Q4VCS5-2;A6NP16;E7ERM3;Q9Y2J4-3;Q9Y2J4;Q9Y2J4-2;Q9Y2J4-4 O43707;Q9Y2J4-3 ACTN4;AMOT;AMOTL2 Alpha-actinin-4;Angiomotin;Angiomotin-like protein 2 0 104.37 0.026291000000000002 848640000.0 643700.0 689620.0 335320.0 328700.0 763630.0 872800.0 456510.0 526120.0 543580.0 719570.0 False True 607992.6778158637 656489.6200592761 356935.2637309694 359939.54917274124 823723.3365396432 867352.5314512798 502658.4859082523 524295.0125173312 444879.5745366831 713195.1696169887 0.8524913007226024 0.9204908390109182 0.5004734733728726 0.5046859043731909 1.154976045311709 1.216150316773849 0.7047979393609716 0.7351353947039438 0.6237837740482726 1.0 19.44393740623705 RECLT(ph)PIRDPLRT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 RECLTPIRDPLRTPPR 16 3 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 2 RECLT(1)PIRDPLRT(1)PPR 56.882 0.034697000000000006 731110000.0 264340.0 286700.0 255930.0 261810.0 236720.0 264200.0 231590.0 237350.0 280860.0 283670.0 True False 249676.53325127444 272926.50165452645 272427.6573024781 286692.3436839536 255348.5172474427 262551.0297999863 255001.37730058987 236526.6882479067 229862.90390443522 281156.9044919203 0.8880327292778594 0.97072665580713 0.968952399709988 1.0196880784487095 0.9082064611178017 0.9338238741618073 0.9069717770630737 0.8412622434982878 0.8175609427761389 1.0 18.101015950637752 -6.637979972298836 1.6197841005520897 0.8742528824223604 0.9579843398520744 0.19252925154512956 0.056273414614111845 0.49368005290465056 2.6440790932619103 0.028845169295586153 0.01948766993663523 2.3015479519639635e-07 6.637979972298836 0.083731457429714 RECLTPIRDPLRT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 RECLTPIRDPLRTPPR 16 3 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 1 RECLT(0.082)PIRDPLRT(0.918)PPR 62.167 0.019856 890720000.0 355400.0 332770.0 332540.0 313780.0 292420.0 274710.0 312530.0 338650.0 406880.0 298910.0 True False 335685.25352766475 316783.229702047 353976.0604828124 343601.5568586027 315431.79035779485 272995.4329914997 344123.582398866 337475.3021915043 333000.8486101139 296261.889948461 1.1330693042769087 1.0692675651166474 1.194807946929629 1.159789930856031 1.0647059276259554 0.9214665883586688 1.1615519716651077 1.1391114201364643 1.1240083855133856 1.0 18.176513529630704 -11.560190720922286 1.7377537527576148 6.508927243397577e-05 1.10629529889634 0.16363541051478359 0.0728830414747597 1279931.3957823212 77190.32883130021 5023350.306074639 0.01972279786550283 2.753019446171407e-12 11.560190720922286 1.106230209623906 RECPSDECGAGVFMASHFDR ddPTM_KYSE-520_SHP099_60min_R1 2 RECPSDECGAGVFMASHFDR 20 1 P62979 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 0 ; 212.39 2.1998e-18 1155950000.0 573130.0 547300.0 400280.0 341780.0 526760.0 502900.0 374240.0 436530.0 383180.0 367040.0 False True 541337.3363936706 521006.8864859512 426082.6892706444 374262.6684400964 568213.0151455849 499761.2145587169 412071.83143042773 435015.77931686817 313604.171181733 363788.31115279905 1.4880558824945234 1.4321704972733906 1.1712379870602283 1.0287924514509699 1.5619331290359217 1.373769302743777 1.1327242211950799 1.1957937239334555 0.8620512577437168 1.0 18.47273966307545 -7.360087601919817 1.5259419036820703 0.9458198084145607 1.3287204188926673 0.47413620217451524 0.15902208398119258 0.4033336244475117 1.660940239187371 0.1416745748668643 0.051000412988479446 4.364277911295526e-08 7.360087601919817 0.38290061047810664 REDEGEPGDEGQLEDEGS(ph)QEK ddPTM_KYSE-520_SHP099_60min_R1 3 REDEGEPGDEGQLEDEGSQEK 21 1 Q969E4 Q969E4 TCEAL3 Transcription elongation factor A protein-like 3 1 REDEGEPGDEGQLEDEGS(1)QEK;REDEGEPGDEGQLEDEGS(1)QEK;REDEGEPGDEGQLEDEGS(1)QEK 160.23 4.4259e-10 1211700000.0 3055296.0 2702290.0 2617646.0 2660164.0 2669224.0 2800466.0 2633092.0 2894474.0 3260890.0 2603069.0 True False 2885812.6402984248 2572467.9321800126 2786383.649541687 2912985.186752527 2879276.742992937 2782987.252913879 2899270.635861503 2884433.745269309 2668794.5763474093 2580007.833817037 1.1185286348642438 0.9970775663785992 1.0799903833700086 1.1290605976350316 1.1159953490269607 1.0786739545656887 1.1237448963758097 1.1179941810493979 1.034413361605579 1.0 21.298944015512173 -3.8955554863561144 21.540248752419583 1.0821151880357964 7.593397722026827 0.05272478804213965 0.047579611368905025 4584.625237930867 916867.3374781664 0.011455870339169923 44613.03552502173 0.0001271875242308238 3.8955554863561144 6.5112825339910305 REDFQDISVPVQEDELS(ph)KVEESSEISPEPK ddPTM_KYSE-520_SHP099_60min_R1 1 REDFQDISVPVQEDELSKVEESSEISPEPK 30 2 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 REDFQDIS(0.001)VPVQEDELS(0.422)KVEES(0.078)S(0.077)EIS(0.422)PEPK 52.32899999999999 0.039081 163020000.0 70124.0 61140.0 68113.0 50127.0 69073.0 53927.0 46132.0 68702.0 83048.0 63263.0 True False 66234.08193127174 58202.742626989 72503.6729646533 54891.05500876789 74508.65212839053 53590.42158979505 50795.47276493288 68463.68879716736 67968.57666971277 62702.5390378692 1.056322167293252 0.9282358181992829 1.1563115956255727 0.875419972636458 1.188287639889527 0.8546770579326798 0.8101023267057008 1.0918806454682595 1.0839844400665042 1.0 15.936236243361082 -3.8662396331517637 16.862998444580708 0.9978803415896547 11.58629593554544 0.019041808539844274 0.12378389737133673 699.3438848628024 88200.46559797067 0.02950155494609483 112.1283028147488 0.0001360693677554099 3.8662396331517637 10.588415593955785 REDFQDISVPVQEDELSKVEESSEIS(ph)PEPK ddPTM_KYSE-520_SHP099_60min_R1 5 REDFQDISVPVQEDELSKVEESSEISPEPK 30 2 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 REDFQDISVPVQEDELS(0.02)KVEES(0.13)S(0.13)EIS(0.719)PEPK;REDFQDISVPVQEDELSKVEESS(0.001)EIS(0.999)PEPK;REDFQDISVPVQEDELSKVEES(0.001)SEIS(0.999)PEPK;REDFQDISVPVQEDELSKVEESSEIS(1)PEPK;REDFQDISVPVQEDELS(0.003)KVEES(0.028)S(0.018)EIS(0.951)PEPK 301.93 3.3771e-53 3639580000.0 1630510.0 1605920.0 1462990.0 1235500.0 1406370.0 1433970.0 1230710.0 1268540.0 1828900.0 1406700.0 True False 1540062.3599588969 1528769.192664937 1557296.6762667655 1352921.54853338 1517043.3178492978 1425020.061325836 1355122.1773721187 1264139.7308194626 1496817.862817139 1394237.732396039 1.104590934655207 1.0964910482215267 1.1169520377206439 0.9703664712963579 1.0880808075981516 1.0220782497952459 0.9719448454771776 0.9066887959250686 1.0735743467828927 1.0 20.411045146388965 -5.472071722222883 0.7112333236091932 0.9847114022469748 1.1215470587385545 0.40318043424858074 0.05219934225862979 0.8976200696913645 0.8757719841050704 0.029082807772922638 0.07765284363459776 3.372316114324114e-06 5.472071722222883 0.1368356564915797 REDIFYTSK ddPTM_KYSE-520_SHP099_60min_R1 6 REDIFYTSK 9 1 S4R3D5;S4R3Z2;A0A0A0MSS8;P42330;P52895-2;P17516;H0Y804;Q04828;A6NHU4;B4DK69;P52895;S4R3P0 S4R3D5;H0Y804 AKR1C3;AKR1C2;AKR1C4;AKR1C1 Aldo-keto reductase family 1 member C3;Aldo-keto reductase family 1 member C2;Aldo-keto reductase family 1 member C4;Aldo-keto reductase family 1 member C1 0 ;;;;; 191.55 1.1143e-05 10910350000.0 14478000.0 12153640.0 8122580.0 7231830.0 12158940.0 11425380.0 9235040.0 10022310.0 10788670.0 9600390.0 False True 13674876.478822544 11569760.891414426 8646174.503387515 7919140.94887102 13115779.403094865 11354069.965390468 10168607.96850486 9987544.945834748 8829719.488238493 9515338.013590395 1.4371403789640724 1.2159064528122676 0.9086565806741193 0.8322500932242672 1.3783829207498564 1.1932387424570605 1.0686544139558072 1.0496258705229302 0.9279459621536661 1.0 23.181823475625794 -4.450203925277916 3.721913383703931 1.0567850222062616 1.4227275423556884 0.40532431671748437 0.14726776459036783 0.2646416409522982 6.612241485995267 0.04035778511098248 0.19186656042103867 3.5464682383326505e-05 4.450203925277916 0.36594252014942685 REDLVVAPAGITLK ddPTM_KYSE-520_SHP099_60min_R1 1 REDLVVAPAGITLK 14 1 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 0 99.663 0.032097 0.0 272080.0 276100.0 184480.0 184630.0 233950.0 285280.0 197750.0 190420.0 239130.0 233010.0 False True 256987.18002196695 262835.74156545085 196371.87597843618 202177.17968896616 252360.53400658627 283499.4617007568 217740.49985401632 189759.47746436222 195710.01997674126 230945.71267903678 1.112760124623409 1.138084524351981 0.8502945289629579 0.8754316213262964 1.0927266459252756 1.2275588856449484 0.9428211389082041 0.821662698402571 0.8474286779626634 1.0 17.81719423840205 -6.992756720698383 24.980270580962856 0.8771757677308195 1.0423952710342024 0.28171676849669647 0.11608548357655721 235.78833422478914 813172.5912789784 0.05316383233186033 0.03575836164520744 1.0168181256904032e-07 6.992756720698383 0.16521950330338286 REDS(ph)FESLDSLGSR ddPTM_KYSE-520_SHP099_60min_R1 6 REDSFESLDSLGSR 14 1 E9PMS6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 REDS(1)FESLDSLGSR;REDS(0.999)FES(0.001)LDSLGSR;REDS(1)FESLDSLGSR;REDS(1)FESLDSLGSR;REDS(0.728)FES(0.272)LDSLGSR;REDS(1)FESLDSLGSR 260.97 7.776999999999999e-25 3559980000.0 3044340.0 2482050.0 2455650.0 2124530.0 2373190.0 2185040.0 2023800.0 1952160.0 2658150.0 2207230.0 True False 2875464.3914586646 2362808.592366993 2613945.128178919 2326444.6924367636 2559946.551395988 2171402.3548605684 2228385.4543846208 1945388.4125975682 2175496.966508491 2187675.6593989544 1.3143924599173327 1.0800543408780052 1.1948503961035426 1.063432178550606 1.1701673145183287 0.9925613724006708 1.0186086976882356 0.8892490092119265 0.9944330445703229 1.0 21.060967432106484 -5.724662660219348 0.542502172613737 0.9466061385203632 1.2452469891000153 0.6435988147850354 0.06997328757601944 0.7291957874614815 0.42584625350349786 0.052077463797956115 0.11400835604074842 1.8851127890007014e-06 5.724662660219348 0.29864085057965206 REDS(ph)YHVR ddPTM_KYSE-520_SHP099_60min_R1 2 REDSYHVR 8 1 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 REDS(1)YHVR;REDS(1)YHVR 100.69 0.0016958 1507800000.0 572010.0 553570.0 505760.0 557140.0 563690.0 495000.0 485640.0 573320.0 654010.0 525750.0 True False 540279.4650263344 526975.6662744896 538362.0988446112 610090.4180897517 608049.1960426277 491910.52138907305 534733.2305896567 571331.2867338933 535258.2702504438 521092.26402730995 1.0368211204110658 1.0112905192675654 1.0331416066011607 1.1707915473060593 1.1668743483990014 0.9439988949121926 1.0261776416654536 1.096410993167134 1.027185216901227 1.0 18.99117931156613 -6.263810658209086 24.999067460639278 1.0252441846630302 1.0817767250944568 0.21924081883876334 0.060685546449519547 453.22798527933963 4778092.2991455 0.02336802594594542 0.021522998071135363 5.447400944607721e-07 6.263810658209086 0.056532540431426526 REDSFESLDSLGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 REDSFESLDSLGSR 14 1 E9PMS6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 REDS(0.107)FES(0.035)LDS(0.01)LGS(0.848)R 196.48 6.3962e-11 1265700000.0 743280.0 617220.0 627280.0 556860.0 565170.0 554300.0 513530.0 622480.0 695360.0 493920.0 True False 702048.7767080539 587567.8247338915 667715.4724834862 609783.8069739359 609645.6636225794 550840.4080928547 565442.6239698256 620320.7621679237 569100.1525991168 489544.2530639452 1.4340864432869789 1.2002343425674784 1.3639532448893192 1.2456152904613607 1.2453331027929488 1.125210651836419 1.1550388354696228 1.2671393000438231 1.1625101286293311 1.0 18.90107975467475 -1.000000009863049 0.051989268411980184 0.6122228338989374 2.379759985028119 0.6485214549928058 0.06897959074514717 301.72534498505223 1.1844571487287754 9.209744624401566 42.230992736705915 0.09999999772894906 1.000000009863049 1.7675371511291815 REDVFK ddPTM_KYSE-520_SHP099_60min_R1 1 REDVFK 6 1 Q9UJA5-3;Q9UJA5-2;Q9UJA5 Q9UJA5-3 TRMT6 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 0 98.41799999999999 0.031052 313890000.0 274830.0 261930.0 179700.0 154890.0 252840.0 268720.0 163310.0 211310.0 226790.0 231420.0 False True 259584.6320399778 249346.48963505437 191283.749530166 169610.69903062342 272737.0695371886 267042.8188033769 179818.96855200693 210577.0149301245 185610.65291065612 229369.79884203547 1.1317297802521549 1.0870938148521316 0.8339535130424955 0.7394639568369352 1.189071407456828 1.1642457732078602 0.7839696832792112 0.9180677490812409 0.8092201059062889 1.0 17.807315918409543 -6.778376875840341 24.99411957910553 0.8709867250709377 1.0130117411365283 0.19349855015981743 0.14511696047176764 480.0206357864744 708344.4106987115 0.06572555656771042 0.0444374160993426 1.6658010218581634e-07 6.778376875840341 0.1420250160655906 REEAAVDAQQQK ddPTM_KYSE-520_SHP099_60min_R1 2 REEAAVDAQQQK 12 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 183.06 3.3029000000000003e-07 138279000.0 379130.0 369370.0 262960.0 247650.0 365580.0 371210.0 268560.0 343840.0 323240.0 304250.0 False True 358098.90312308277 351624.9107643268 279910.8223508761 271186.58154131257 394349.0661343357 368893.1406966421 295708.66569301934 342647.2992928593 264547.76421729545 301554.58170291793 1.1875094090789524 1.166040684172846 0.9282260636538278 0.8992951790348754 1.3077203599673242 1.2233047119146874 0.9806140700072075 1.1362695846234052 0.8772798699438086 1.0 18.202059629548078 -7.756041452258869 24.998890820042927 0.9386399168241875 1.0997380501499108 0.2101072670531351 0.1277787705141654 205.81433195611012 953202.4080175892 0.09772562686352786 0.03452743718706435 1.753713106578625e-08 7.756041452258869 0.16109813332572331 REEDEENDNDNES(ph)DHDEADS ddPTM_KYSE-520_SHP099_60min_R1 10 REEDEENDNDNESDHDEADS 20 1 H0YBP8;Q9NRG0 H0YBP8 CHRAC1 Chromatin accessibility complex protein 1 1 REEDEENDNDNES(0.891)DHDEADS(0.109);REEDEENDNDNES(0.999)DHDEADS(0.001);REEDEENDNDNES(0.998)DHDEADS(0.002);REEDEENDNDNES(0.999)DHDEADS(0.001);REEDEENDNDNES(0.989)DHDEADS(0.011);REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(1)DHDEADS;REEDEENDNDNES(0.995)DHDEADS(0.005) 294.36 3.4558e-44 10699964000.0 1230335.2 1139834.1 1054243.1 1046910.8 1102662.0 1105189.4 1041049.7 1094111.6 1287252.8 1133172.1 True False 1162086.0538435841 1085074.7589101354 1122201.2970746 1146408.8876667896 1189435.226111436 1098291.5030054078 1146289.1633419653 1090316.3822271663 1053520.1405223785 1123133.0767885542 1.0346824235347165 0.9661141509719922 0.9991703746125805 1.0207240008857983 1.0590332087026266 0.9778818963695936 1.0206174023648407 0.9707811164682081 0.9380189777107941 1.0 20.099097447951674 -7.3284555912799 5.913289591853487 0.9649220102342076 1.0098795887231535 0.30078356924090444 0.02879591029010001 0.28035822669692234 18.771961508442754 0.016064457332734493 0.007593101223566139 4.694014304393342e-08 7.3284555912799 0.04495757848894588 REEDEPEERS(ph)GDETPGSEVPGDK ddPTM_KYSE-520_SHP099_60min_R1 8 REEDEPEERSGDETPGSEVPGDK 23 2 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 REEDEPEERS(0.985)GDET(0.008)PGS(0.008)EVPGDK;REEDEPEERS(0.98)GDET(0.014)PGS(0.006)EVPGDK;REEDEPEERS(0.996)GDET(0.003)PGS(0.002)EVPGDK;REEDEPEERS(0.92)GDET(0.022)PGS(0.057)EVPGDK;REEDEPEERS(0.818)GDET(0.172)PGS(0.01)EVPGDK;REEDEPEERS(0.982)GDET(0.002)PGS(0.016)EVPGDK;REEDEPEERS(0.998)GDET(0.001)PGSEVPGDK;REEDEPEERS(0.985)GDET(0.011)PGS(0.004)EVPGDK 243.92 1.5874e-28 6346830000.0 5756350.0 5391860.0 5357570.0 4694510.0 5196930.0 5018900.0 4157000.0 4989540.0 7334340.0 4968710.0 True False 5437033.790500772 5132826.952253137 5702927.534615082 5140674.818944102 5605898.824513136 4987575.1834335765 4577230.128410345 4972232.450307394 6002608.7396655055 4924691.094997889 1.1040354990028267 1.042263738626501 1.158027462962634 1.043857314048711 1.1383249662516222 1.0127691437336162 0.929445124600715 1.0096536725639085 1.2188802554057612 1.0 22.23160180258529 -6.277876725459227 23.97781929507362 1.0282089566996462 1.094648639170555 0.1422908904316158 0.07669734077226914 975.6323897912802 1423188.9908590221 0.027336609640553802 0.024188363535234788 5.273795369239177e-07 6.277876725459227 0.06643968247090881 REEEKEGEDKSQPK ddPTM_KYSE-520_SHP099_60min_R1 1 REEEKEGEDKSQPK 14 3 O14974-5;O14974-4;O14974-3;O14974-2;O14974;H0YIL7;H0YIM2;H0YIS3 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 0 157.35 2.2785999999999998e-07 491200000.0 289910.0 271260.0 234560.0 147780.0 244080.0 213710.0 204330.0 198160.0 254900.0 124760.0 False True 273828.1143787433 258228.26243043915 249680.1129092692 161824.96676832283 263287.70737477107 212376.15661830036 224985.6704686281 197472.62921089167 208616.58550609028 123654.72346181131 2.2144573754459973 2.0883008364026514 2.019171657331624 1.3086840699482034 2.129216741615884 1.717493280261867 1.8194668522962743 1.5969679417210276 1.6870894994198746 1.0 16.91595782443378 -9.85167124972262 0.11272307026026629 1.0589127411215085e-16 2.523328072139837 0.6233268118698416 0.22435358139434108 29.07480800692004 0.7041658822301632 12.991234933358548 3.9189178955204778 1.407112270583299e-10 9.85167124972262 2.523328072139837 REEGPPPPSPDGASS(ph)DAEPEPPSGR ddPTM_KYSE-520_SHP099_60min_R1 2 REEGPPPPSPDGASSDAEPEPPSGR 25 1 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 REEGPPPPSPDGAS(0.074)S(0.926)DAEPEPPSGR;REEGPPPPSPDGAS(0.295)S(0.705)DAEPEPPSGR 121.24 4.4083999999999997e-07 946680000.0 817330.0 731700.0 723420.0 708120.0 732160.0 799160.0 671260.0 754060.0 893030.0 691130.0 True False 771991.0755930388 696548.0336959094 770052.8107129257 775419.5118959585 789776.8265794507 794172.146006649 739117.5116662803 751444.3418589265 730878.26345431 685007.1258910032 1.1269825472091166 1.0168478653267945 1.1241529928777045 1.1319875116442826 1.1529468770885725 1.159363335050935 1.07899244216605 1.096987627510454 1.0669644677106698 1.0 19.385759470443027 -8.087257263190565 1.1880935558396037 1.0005185129838559 1.1140101941971714 0.4549563925719786 0.0383030490896052 0.5836218430886384 1.7974468868198112 0.03924685289006579 0.012275353967125318 8.179800974034197e-09 8.087257263190565 0.11349168121331554 REEGWK ddPTM_KYSE-520_SHP099_60min_R1 2 REEGWK 6 1 O75179-6;O75179-2;O75179;H0YM23;O75179-4;O75179-7;Q8IWZ3-6;H0Y4P6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;A0A0A0MQZ8;H0Y7Y3 O75179-6;Q8IWZ3-6 ANKRD17;ANKHD1 Ankyrin repeat domain-containing protein 17;Ankyrin repeat and KH domain-containing protein 1 0 ; 120.65 0.019854 683660000.0 721920.0 709840.0 458100.0 431360.0 773690.0 779730.0 618010.0 671030.0 694780.0 674450.0 False True 681873.6584881586 675738.220908437 487629.858985915 472356.3247068874 834575.0013060734 774863.4158438414 680484.4819963623 668702.3535495789 568625.4659785065 668474.8977141601 1.0200437754952585 1.010865513752444 0.7294662232693524 0.7066178944371775 1.2484762018138453 1.1591511042426204 1.0179656473612828 1.0003402608477843 0.8506309929107476 1.0 19.350513860300314 -4.55501849389584 24.999174654043127 0.9670276684545378 1.0177513746548734 0.01593785679840909 0.16084725814236284 1174.81138768017 913798.0273956467 0.04543143667128765 0.1202027464036624 2.7860025276159815e-05 4.55501849389584 0.050723706200335617 REELITNWEQIR ddPTM_KYSE-520_SHP099_60min_R1 2 REELITNWEQIR 12 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 199.13 2.8028e-07 0.0 217570.0 204835.0 156911.0 183317.0 219300.0 165018.0 169539.0 196870.0 199641.0 172532.0 False True 205500.95838495754 194994.41913639673 167025.73412647683 200739.39256373432 236557.66235368396 163988.06145168105 186677.6566611887 196187.1039198035 163391.2269400604 171003.500707865 1.2017353886574902 1.1402948964741768 0.9767386833314974 1.1738905445372656 1.383349822515089 0.9589748793027997 1.0916598542628713 1.1472695185051276 0.9554846904519864 1.0 17.383666334063662 -7.7599603751896105 24.997669256763825 0.9777422932697462 1.1315549912629546 0.23584897523228143 0.11259484080739307 57.7694558379097 976544.9426400182 0.08851416305882401 0.029300172928765886 1.737959392057629e-08 7.7599603751896105 0.1538126979932084 REERPENK ddPTM_KYSE-520_SHP099_60min_R1 2 REERPENK 8 2 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 0 ; 101.46 0.0016365 993900000.0 142592.0 294480.0 95550.0 77554.0 322880.0 533390.0 112954.0 126662.0 118891.0 755550.0 False True 134682.13750989537 280332.73877650837 101709.30588540531 84924.70884253958 348288.8190641024 530060.9151590257 124372.49264480696 126222.6390851331 97303.39139821343 748856.4148090052 0.17985041570919288 0.3743477831434573 0.1358195027431876 0.11340586414579824 0.46509425862758086 0.7078271677678251 0.16608323062376115 0.16855385971064427 0.12993597901278647 1.0 19.51432959832633 -10.71381355246787 2.765875266618243 1.1166017624406472 0.27805546492016436 0.5896188220075592 0.18232169514644495 65155670.220246166 56682565.79128739 52764280.841630526 0.04968075107348383 1.9327979109266047e-11 10.71381355246787 -0.8385462975204829 REESPMDVDQPS(ph)PSAQDTQSIASDGTPQGEK ddPTM_KYSE-520_SHP099_60min_R1 3 REESPMDVDQPSPSAQDTQSIASDGTPQGEK 31 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7;H0Y659 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 REESPMDVDQPS(0.994)PS(0.006)AQDTQSIASDGTPQGEK;REESPMDVDQPS(0.995)PS(0.005)AQDTQSIASDGTPQGEK;REESPMDVDQPS(0.967)PS(0.033)AQDTQSIASDGTPQGEK 322.73 9.632299999999998e-66 882010000.0 1703560.0 1707970.0 1286070.0 1318310.0 1445650.0 1780580.0 1484300.0 1706940.0 1980760.0 1651700.0 True False 1609060.1308373353 1625916.557484763 1368972.129984754 1443601.786035646 1559414.4303766708 1769466.739747384 1634347.5293720185 1701019.0235427911 1621103.9148962062 1637067.2230031535 0.9828919107460719 0.9931886330862242 0.8362345240004337 0.8818219348301406 0.9525659108341129 1.0808760415478527 0.9983386793206049 1.0390648591829479 0.9902488377492141 1.0 20.64268213383756 -6.048446931113062 7.474307218603664 1.0223244252862127 0.9215865385020738 0.4825891624362453 0.04854584845534634 0.24613945319148803 33.530510164158535 0.016989092681304573 0.01717257219986306 8.944438223795694e-07 6.048446931113062 -0.10073788678413886 REEVNDRPVRR ddPTM_KYSE-520_SHP099_60min_R1 1 REEVNDRPVRR 11 3 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 0 84.65799999999999 0.0089809 42746000.0 28540.0 34065.0 30281.0 25918.0 36477.0 21769.0 15202.0 31937.0 31689.0 15352.0 False True 26956.82930692052 32428.46626739256 32232.961711313037 28381.238927469156 39347.53237426057 21633.131596199462 16738.766517222528 31826.21800115182 25935.076414682222 15215.993223675272 1.771611547840146 2.131209300023583 2.1183606773142007 1.8652242091767934 2.5859325642336586 1.4217364110375303 1.1000771537659404 2.0916293490215234 1.7044616170260005 1.0 13.893300888367644 -6.292844724473826 24.978690166267246 1.509088668827039 2.085100593136015 0.4480889323922086 0.34818134150628816 702.021268307716 558360.4242613333 0.12290942458318777 0.10840627958717496 5.095130072852679e-07 6.292844724473826 0.5760119243089761 REGPVGGES(ph)DSEEMFEK ddPTM_KYSE-520_SHP099_60min_R1 7 REGPVGGESDSEEMFEK 17 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 REGPVGGES(0.862)DS(0.138)EEMFEK;REGPVGGES(0.984)DS(0.016)EEMFEK;REGPVGGES(0.993)DS(0.007)EEMFEK;REGPVGGES(0.581)DS(0.419)EEMFEK;REGPVGGES(0.957)DS(0.043)EEMFEK;REGPVGGES(0.928)DS(0.072)EEMFEK;REGPVGGES(0.957)DS(0.043)EEMFEK 260.13 2.0169999999999998e-29 4554480000.0 5311250.0 4872910.0 3991940.0 4293370.0 4567320.0 4593560.0 4332750.0 4574590.0 5616950.0 4625140.0 True False 5016624.374785619 4638808.089212967 4249266.839729834 4701410.593951245 4926742.099504005 4564889.888145437 4770746.653565054 4558721.815007331 4597053.471786718 4584164.857904472 1.0943376886054734 1.011919996990133 0.9269445954594818 1.0255762477312755 1.0747305675555772 0.9957953148814448 1.040701371229889 0.9944497975780103 1.0028115511291051 1.0 22.128227497233244 -7.292915351016629 23.504089200283268 0.9989729962017362 1.020960933289597 0.0643056402686275 0.042751229137509214 1250.9443575123246 934109.324764189 0.02440792068880749 0.011727612011900965 5.094301551702669e-08 7.292915351016629 0.021987937087860843 RENDLYVLPPLQEEEKHS(ph)S(ph)EEEDEKEWQER ddPTM_KYSE-520_SHP099_60min_R1 1 RENDLYVLPPLQEEEKHSSEEEDEKEWQER 30 3 A0A494C0S2;A0A1W2PS85;R4GMW8;P28715;P28715-3 A0A494C0S2 BIVM-ERCC5;ERCC5 DNA repair protein complementing XP-G cells 2 RENDLYVLPPLQEEEKHS(1)S(1)EEEDEKEWQER 69.163 0.026799 617540000.0 125420.0 91620.0 80667.0 123460.0 95074.0 59893.0 83820.0 92263.0 114180.0 68386.0 True False 118462.70258142862 87218.43767557624 85866.92389176345 135193.60128039733 102555.78290293738 59519.18557081973 92293.34360436749 91942.96118734613 93447.79024356771 67780.15324350298 1.7477491110981485 1.2867843092983342 1.2668446408387866 1.9945897849287648 1.513065078718567 0.8781211419955723 1.3616573464034505 1.3564879509350956 1.3786895687274812 1.0 16.048575278150523 -6.03241324392966 24.545418363796035 1.224122124770402 1.5593242280321795 0.3520986670653783 0.24800352992654306 687.3758398882158 520524.2943268616 0.08395441783730598 0.08403035640112179 9.280828684463208e-07 6.03241324392966 0.3352021032617776 RENELPDFPHIDEFFTLNS(ph)TPSR ddPTM_KYSE-520_SHP099_60min_R1 2 RENELPDFPHIDEFFTLNSTPSR 23 1 A0A087WZP0;E9PLV2;Q8NCY6 A0A087WZP0 MSANTD4 Myb/SANT-like DNA-binding domain-containing protein 4 1 RENELPDFPHIDEFFT(0.087)LNS(0.437)T(0.426)PS(0.05)R;RENELPDFPHIDEFFT(0.042)LNS(0.479)T(0.398)PS(0.082)R 68.104 0.011945 103560000.0 66575.0 72086.0 75799.0 79748.0 93715.0 128521.0 134414.0 165858.0 215708.0 149765.0 True False 62881.95203602771 68622.88035670799 80685.12482268814 87327.22594288942 101089.83733458963 127718.85276655554 148001.87887422388 165282.67730954805 176540.86475617005 148438.19861540696 0.4236237883683193 0.46229933397740225 0.5435603879277576 0.5883069638237 0.6810230673608911 0.8604176954307172 0.9970605966304297 1.1134780592277596 1.1893223334889367 1.0 17.17950287274072 -6.285996038326567 0.9022775322215848 1.1288664596974947 0.4593660858661939 0.960287995744102 0.05312822606160274 0.10016752276350623 0.1744970828193388 0.03324796201872504 0.029990190098786375 5.176115536283078e-07 6.285996038326567 -0.6695003738313008 down REPEDEGEDDD ddPTM_KYSE-520_SHP099_60min_R1 1 REPEDEGEDDD 11 1 P39687 P39687 ANP32A Acidic leucine-rich nuclear phosphoprotein 32 family member A 0 89.029 0.017205 119560000.0 289570.0 277610.0 398280.0 176250.0 328430.0 307240.0 252600.0 280960.0 400940.0 314620.0 False True 273506.9748565163 264273.19889889495 423953.76607053186 193000.74700850542 354275.57248892146 305322.40119510895 278135.27313843026 279985.41533655685 328139.40287489945 311832.7115706563 0.8770952010740029 0.8474838882931462 1.3595551407520334 0.6189239930486721 1.1361077890272853 0.9791224264357776 0.8919374485681861 0.8978705727385392 1.0522930747775265 1.0 18.25041275059756 -5.039078462369893 0.004563765361002018 1.9158769619969103 5.418898419351156e-06 0.005882564172750571 0.18523106384447446 347534.8025367051 325.4267282887353 66603.80761358127 70030.62865035396 9.139481069459886e-06 5.039078462369893 -1.915871543098491 REPES(ph)PPASAPIPLFGADTIGQR ddPTM_KYSE-520_SHP099_60min_R1 2 REPESPPASAPIPLFGADTIGQR 23 1 Q96AY4 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 REPES(0.987)PPAS(0.013)APIPLFGADTIGQR;REPES(0.998)PPAS(0.002)APIPLFGADTIGQR 129.51 3.3009e-05 389260000.0 310110.0 265033.0 272780.0 243715.0 215689.0 295620.0 243279.0 310140.0 312140.0 313290.0 True False 292907.5801110413 252300.41685735635 290363.83526343136 266877.60032441304 232662.49719746358 293774.9259253289 267872.0154942364 309064.19672721997 255463.2444090664 310514.4943359321 0.9432976091420627 0.8125237998855008 0.935105576583164 0.8594690592307418 0.7492806340491024 0.9460908630162258 0.862671535082795 0.9953293722671023 0.8227095645097064 1.0 18.244301087225622 REPGYT(ph)PPGAGNQNPPGMYPVTGPK ddPTM_KYSE-520_SHP099_60min_R1 2 REPGYTPPGAGNQNPPGMYPVTGPK 25 1 A0A087WZF1;Q93052;C9JUT4;C9JXK9 A0A087WZF1 LPP Lipoma-preferred partner 1 REPGYT(1)PPGAGNQNPPGMYPVTGPK;REPGYT(1)PPGAGNQNPPGMYPVTGPK 164.03 6.4481e-10 1781750000.0 943330.0 1149950.0 816420.0 705920.0 706070.0 1165710.0 840680.0 1031570.0 1109930.0 1104560.0 True False 891001.6044182656 1094704.6758898608 869047.7395181868 773010.4245574125 761633.6920112434 1158434.371491832 925664.1386461416 1027991.7244402489 908394.6910583564 1094774.4577346768 0.8138677314978092 0.9999362591588405 0.7938144093317934 0.7060910300711043 0.6956991795252758 1.0581488847382146 0.8455295354273604 0.9389986377352869 0.8297551012817928 1.0 20.06220224990568 -6.255000180628301 24.99581776080899 0.9251140404154798 0.8071148695878292 0.30480812687146286 0.09947253929712345 809.9886251142906 3144234.3227839754 0.035162900713968756 0.0343604282417525 5.559040260631821e-07 6.255000180628301 -0.11799917082765066 REPLPSR ddPTM_KYSE-520_SHP099_60min_R1 8 REPLPSR 7 1 P38159;P38159-2;H3BT71;H3BUY5;H0Y6E7;Q8IZ40;Q96E39 P38159;Q96E39 RBMX;RCOR2;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;REST corepressor 2;RNA binding motif protein, X-linked-like-1 0 ;;;;;;; 122.19 0.0059433 5154230000.0 2207930.0 1958560.0 1576360.0 1524387.0 2217100.0 1948420.0 1627757.0 1873319.0 1775702.0 1715946.0 False True 2085451.7215006638 1864467.8377415037 1677974.6878651753 1669264.2821563373 2391573.1564265997 1936259.188050296 1792306.5629374157 1866820.8936249432 1453279.2786046907 1700744.0534257866 1.2261996255697414 1.0962659748748969 0.9866121151417538 0.981490588659687 1.4061922789671293 1.138477705772432 1.0538367365313999 1.0976495198466991 0.8544961692956499 1.0 20.69773461412526 -7.668540566012841 6.260092485160598 0.9291865717325204 1.122296883234299 0.2974587089596429 0.12087303503011242 0.26538111230534267 14.353255786427281 0.08907695927541143 0.03236763205377692 2.1451587342666358e-08 7.668540566012841 0.1931103115017786 REPYGHLGPAELLEAS(ph)PAAR ddPTM_KYSE-520_SHP099_60min_R1 3 REPYGHLGPAELLEASPAAR 20 1 Q9H6W3 Q9H6W3 NO66 Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 1 REPYGHLGPAELLEAS(1)PAAR;REPYGHLGPAELLEAS(1)PAAR;REPYGHLGPAELLEAS(1)PAAR 163.71 4.8932e-09 1146670000.0 387103.0 359549.0 362559.0 331957.0 305108.0 352701.0 278937.0 343267.0 421200.0 341561.0 True False 365629.6249193006 342275.7263459483 385930.1332549105 363506.0934734887 329118.2637729501 350499.66223120724 307134.6741227803 342076.2868961199 344720.6975879375 338535.03527043655 1.0800348171562797 1.011049642387895 1.1400005702411649 1.0737621090919118 0.9721837608625532 1.035342359620808 0.9072463471245384 1.0104605173962407 1.0182718527568635 1.0 18.368945621664977 -5.753450117075466 24.605133432074982 0.9891781858014863 1.0761137175232767 0.4821785123993617 0.04345690847985877 128.97906630790138 397223.5723214557 0.012879920126401687 0.016320934386449618 1.7642083892477514e-06 5.753450117075466 0.08693553172179036 REQGGSGLGSGSS(ph)GGGGSTSGLGSGYIGR ddPTM_KYSE-520_SHP099_60min_R1 2 REQGGSGLGSGSSGGGGSTSGLGSGYIGR 29 1 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 REQGGS(0.001)GLGS(0.031)GS(0.351)S(0.617)GGGGSTSGLGSGYIGR;REQGGSGLGS(0.004)GS(0.078)S(0.918)GGGGSTSGLGSGYIGR 134.22 1.8143000000000001e-06 531430000.0 151677.0 131073.0 137896.0 111240.0 128887.0 135843.0 118935.0 151761.0 162602.0 123438.0 True False 143263.17444939664 124776.05633541601 146784.99680140108 121812.21615447439 139029.67363328452 134995.15344859776 130958.11049374191 151234.57651228356 133077.57566285323 122344.43535331075 1.1709823502448313 1.0198752070340031 1.1997684764125969 0.995649829129544 1.136379216854363 1.1034024805358233 1.07040512398914 1.236137762012165 1.0877288801778922 1.0 16.900588958602356 -8.021538258700291 24.33366406964943 0.9999999926418569 1.1139733803794085 0.19401472139674147 0.07134552872608789 2023.0669581145517 2285636.585750464 0.06460862203288202 0.01668187444654459 9.516160128420957e-09 8.021538258700291 0.11397338773755161 REREEIEK ddPTM_KYSE-520_SHP099_60min_R1 2 REREEIEK 8 2 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 0 ; 97.431 0.0020911 30612000.0 45269.0 53807.0 44637.0 27442.0 41385.0 37353.0 23321.7 28925.0 54543.0 24098.0 False True 42757.8383284858 51222.03095404645 47514.37244172521 30050.079429261838 44641.764051560516 37119.86607160816 25679.28503385797 28824.665926145753 44639.366117138794 23884.510467960306 1.790191110922829 2.144571102797265 1.9893383414938732 1.2581408971966281 1.8690675746293761 1.5541397057897552 1.0751438706815972 1.2068351145321727 1.8689671775781183 1.0 14.543787687479268 -5.57252156254083 0.6944068019262615 1.3078980433752632 2.0566068365715915 0.4052580338523095 0.3018659633578478 0.9244440336228277 0.8963251827451487 0.17990814625417392 0.42200012243753593 2.6759527299583147e-06 5.57252156254083 0.7487087931963283 RES(ph)AAS(ph)GLGGLLEEEGAGAGAAQEEVLEPGR ddPTM_KYSE-520_SHP099_60min_R1 3 RESAASGLGGLLEEEGAGAGAAQEEVLEPGR 31 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 RES(1)AAS(1)GLGGLLEEEGAGAGAAQEEVLEPGR;RES(1)AAS(1)GLGGLLEEEGAGAGAAQEEVLEPGR;RES(1)AAS(1)GLGGLLEEEGAGAGAAQEEVLEPGR 188.12 1.9097000000000002e-15 371633000.0 136835.0 131741.0 129065.0 131803.0 125160.0 146812.0 125983.0 146595.0 166387.0 167327.0 True False 129244.48977619006 125411.9646127276 137384.7364113015 144329.51749198313 135009.37993701373 145895.6918508538 138718.591115593 146086.49616053022 136175.3150749387 165844.61295843602 0.7793107504105745 0.7562016177405675 0.8283943262343582 0.8702695548401985 0.814071542805251 0.8797131799958927 0.8364371241311207 0.8808636804931519 0.8211018292711562 1.0 17.339472625035025 -13.999999999997232 0.08749001907602004 1.5202165667067595 0.6918549395285127 0.7313913813235247 0.03326862109446703 118.78422530049149 0.7243020829199469 11.758169047570687 0.8838886306721182 1.0000000000063726e-14 13.999999999997232 -0.8283616271782468 RES(ph)AASGLGGLLEEEGAGAGAAQEEVLEPGR ddPTM_KYSE-520_SHP099_60min_R1 5 RESAASGLGGLLEEEGAGAGAAQEEVLEPGR 31 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RES(0.95)AAS(0.05)GLGGLLEEEGAGAGAAQEEVLEPGR;RES(0.95)AAS(0.05)GLGGLLEEEGAGAGAAQEEVLEPGR;RES(0.997)AAS(0.003)GLGGLLEEEGAGAGAAQEEVLEPGR;RES(0.991)AAS(0.009)GLGGLLEEEGAGAGAAQEEVLEPGR;RES(0.992)AAS(0.008)GLGGLLEEEGAGAGAAQEEVLEPGR 199.99 7.169800000000001e-16 3022490000.0 792846.0 790966.0 665110.0 558319.0 561219.0 792604.0 600086.0 725112.0 898358.0 839030.0 True False 748865.2518806835 752966.80609583 707984.054813626 611381.4698952723 605383.742400695 787657.0644344738 660748.5491549803 722596.7557144134 735238.8329622614 831596.8469554614 0.9005147802355618 0.9054469228118146 0.8513549052111115 0.7351897402372145 0.7279774383669808 0.9471621583440888 0.7945539374927051 0.8689267622404948 0.8841289329727813 1.0 19.665524762586987 -8.271925807037785 1.139124331474049 0.9999111451049792 0.8357173161786228 0.3385733823694491 0.06751127811306618 1.1822449455329043 2.8225177609802174 0.06889374211261769 0.02152805587111529 5.3465568982577476e-09 8.271925807037785 -0.16419382892635648 RES(ph)ASSSSSVK ddPTM_KYSE-520_SHP099_60min_R1 5 RESASSSSSVK 11 1 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 RES(0.959)AS(0.017)S(0.005)S(0.008)S(0.008)S(0.003)VK;RES(0.998)AS(0.001)S(0.001)S(0.001)SSVK;RES(0.609)AS(0.26)S(0.093)S(0.033)S(0.003)S(0.001)VK;RES(0.995)AS(0.002)S(0.002)S(0.002)SSVK;RES(0.993)AS(0.002)S(0.002)S(0.002)SSVK 174.89 8.9918e-06 841856000.0 1028844.0 860079.0 868453.0 1011202.0 947005.0 1149429.0 1301783.0 1331661.0 1392103.0 1387978.0 True False 971771.9723703327 818759.5138351009 924434.8699539301 1107306.334051032 1021528.905778616 1142254.9872519611 1433379.9298177538 1327041.7788030137 1139332.1872608266 1375681.5947505434 0.7063930898534316 0.5951664374659088 0.6719831634598272 0.8049146970319272 0.7425620213839185 0.8303193061611687 1.0419416348138852 0.9646431149961342 0.8281946866254507 1.0 20.391715162307108 -6.0498014486397 0.9751419817620212 0.9578281625802766 0.6531337547804819 0.7403757740595212 0.07102901024383139 0.28114664368036363 0.5771213780165646 0.03907418425230322 0.04432065791171634 8.916584946440797e-07 6.0498014486397 -0.30469440779979473 RES(ph)CGSSVLTDFEGK ddPTM_KYSE-520_SHP099_60min_R1 9 RESCGSSVLTDFEGK 15 1 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RES(1)CGSSVLTDFEGK;RES(1)CGSSVLTDFEGK;RES(0.944)CGS(0.001)S(0.055)VLTDFEGK;RES(0.963)CGS(0.015)S(0.015)VLT(0.006)DFEGK;RES(0.93)CGS(0.035)S(0.035)VLTDFEGK;RES(0.982)CGS(0.014)S(0.003)VLTDFEGK;RES(0.43)CGS(0.43)S(0.138)VLT(0.001)DFEGK;RES(0.992)CGS(0.008)SVLTDFEGK;RES(0.7)CGS(0.147)S(0.147)VLT(0.007)DFEGK 269.7 3.4223000000000003e-25 17194160000.0 12011970.0 10883830.0 9651740.0 10229780.0 10054860.0 10807340.0 10167430.0 11460140.0 12498420.0 11041870.0 True False 11345642.078831453 10360954.469838107 10273906.603730023 11202015.215504488 10846120.27767243 10739887.382280786 11195253.048954343 11420387.44915677 10229021.987528557 10944047.622244855 1.0366952402299783 0.946720521279389 0.9387666207562269 1.0235714976911547 0.9910519994107685 0.9813450884890985 1.0229536123544354 1.0435250140856211 0.9346653396077208 1.0 23.383643077346505 -5.273877875049222 24.912674840785577 1.0012588891769443 0.9713267641992497 0.08868111182671334 0.03691968776904339 1531.7871091710074 3067964.725495376 0.010264689343590696 0.015359402847664043 5.322579107943731e-06 5.273877875049222 -0.029932124977694596 RES(ph)CGSSVLTDFEGKDVATK ddPTM_KYSE-520_SHP099_60min_R1 11 RESCGSSVLTDFEGKDVATK 20 2 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RES(0.99)CGS(0.009)S(0.002)VLTDFEGKDVATK;RES(0.992)CGS(0.008)SVLTDFEGKDVATK;RES(0.826)CGS(0.086)S(0.086)VLT(0.001)DFEGKDVATK;RES(0.847)CGS(0.074)S(0.074)VLT(0.005)DFEGKDVATK;RES(1)CGSSVLTDFEGKDVATK;RES(1)CGSSVLTDFEGKDVATK;RES(0.843)CGS(0.128)S(0.027)VLT(0.002)DFEGKDVATK;RES(0.689)CGS(0.152)S(0.152)VLT(0.007)DFEGKDVATK;RES(0.936)CGS(0.064)SVLTDFEGKDVATK;RES(0.637)CGS(0.161)S(0.161)VLT(0.042)DFEGKDVATK;RES(0.973)CGS(0.023)S(0.004)VLTDFEGKDVATK 298.86 2.0183e-44 35340960000.0 13284910.0 13336608.0 13335580.0 9727526.0 10132431.0 9539501.0 8252683.0 8628429.0 15333840.0 9090149.0 True False 12547969.55948847 12695897.333023269 14195212.824482422 10652027.146352677 10929795.67405383 9479961.435760783 9086944.73606444 8598498.99368946 12549601.19065009 9009617.35188891 1.3927305754952763 1.4091494496557628 1.575562232008258 1.1822951775104442 1.2131254022416773 1.0522046681342425 1.0085827600835142 0.9543689435253034 1.3929116743253258 1.0 23.10303440385854 -5.503111932815119 2.4371867516610015 1.0903118930440985 1.4532284561490898 0.5931113917288591 0.12997404321247227 0.19949129197184007 2.365465065456649 0.04005701845278305 0.060832599266070965 3.139699379695853e-06 5.503111932815119 0.3629165631049913 RES(ph)DESGESAPDEGGEGAR ddPTM_KYSE-520_SHP099_60min_R1 2 RESDESGESAPDEGGEGAR 19 1 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 RES(1)DESGESAPDEGGEGAR;RES(1)DESGESAPDEGGEGAR 185.18 7.0263e-13 273520000.0 186743.0 149258.0 119909.0 128919.0 150666.0 127491.0 136564.0 128432.0 158462.0 147679.0 True False 176383.9935270586 142087.4216391745 127638.52600118345 141171.4229990893 162522.55702772556 126695.28137861486 150369.22185620165 127986.49936825414 129689.29530194621 146370.67895252336 1.2050500468353387 0.9707369170929503 0.8720225041969242 0.9644788424113241 1.1103491367997358 0.8655782857966356 1.0273179227717817 0.8743998475935724 0.8860332973109464 1.0 17.159267055610563 -4.267744699328437 4.807846305104444 0.9497935880773619 1.2180276107882544 0.5015375859942306 0.075803844686896 0.14015993199580198 9.39071401741164 0.018888031189352603 0.12508028724341858 5.3982786789239045e-05 4.267744699328437 0.2682340227108925 RES(ph)EDDPES(ph)EPDDHEK ddPTM_KYSE-520_SHP099_60min_R1 3 RESEDDPESEPDDHEK 16 1 P16383;P16383-3;P16383-4 P16383 GCFC2 GC-rich sequence DNA-binding factor 2 2 RES(1)EDDPES(1)EPDDHEK;RES(1)EDDPES(1)EPDDHEK;RES(1)EDDPES(1)EPDDHEK 147.17 2.3753999999999997e-06 1564720000.0 4226580.0 3993810.0 3632400.0 3834140.0 3994740.0 3909990.0 3853720.0 3886510.0 4645230.0 3771640.0 True False 3992123.1819216576 3801941.372768973 3866550.3160454934 4198535.512823774 4309103.311038564 3885586.3020728477 4243291.626282778 3873028.6039282563 3801773.3287189277 3738226.2038915157 1.0679191049931205 1.017044225095616 1.0343275406984178 1.12313575579056 1.1527133661822717 1.039419791672299 1.135108309354176 1.0360605251486414 1.0169992722113121 1.0 21.833922440001317 -7.50023473536247 13.724725048587251 1.0144980650835982 1.080245232652372 0.3290552186814484 0.042707245222661935 3.325958578236233 2019.369210878932 0.025888349125721827 0.011999751852656311 3.1605689167824996e-08 7.50023473536247 0.06574716756877375 RES(ph)EKS(ph)LENETLNK ddPTM_KYSE-520_SHP099_60min_R1 2 RESEKSLENETLNK 14 2 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 RES(1)EKS(0.999)LENET(0.001)LNK;RES(1)EKS(0.999)LENET(0.001)LNK 131.18 2.1686999999999998e-05 3061800000.0 4583310.0 3822710.0 3320310.0 4537500.0 4175970.0 4319060.0 4706820.0 5266750.0 4338210.0 4650510.0 True False 4329064.657698035 3639061.273595308 3534342.4952838346 4968742.635750881 4504595.08098092 4292103.144466042 5182631.299736441 5248480.873518692 3550500.4213745664 4609310.099442028 0.9392001328402882 0.7895023756452897 0.7667834055494939 1.077979682111725 0.9772818456120398 0.9311812509610959 1.1243832998703678 1.1386695102492752 0.7702889032795528 1.0 22.136119400109553 -5.259997684443128 24.995632207631417 1.0096195584946734 0.8275960085667059 0.3434305634279966 0.10801504473566383 139.27897479262876 2414753.0650119786 0.029664146300100443 0.04808169883569069 5.495438038891864e-06 5.259997684443128 -0.18202354992796754 RES(ph)EKSLENET(ph)LNK ddPTM_KYSE-520_SHP099_60min_R1 1 RESEKSLENETLNK 14 2 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 RES(0.989)EKS(0.081)LENET(0.93)LNK 119.62 0.00029598 1741900000.0 1683400.0 1399600.0 1356700.0 1641200.0 1435700.0 1542200.0 1700000.0 1805900.0 1722400.0 1660400.0 True False 1590018.446225299 1332361.1151575693 1444155.0527967513 1797179.1545552283 1548681.4219844239 1532574.5577499564 1871852.5904011521 1799635.7544002302 1409655.5781706143 1645690.147771653 0.9661712129578364 0.8096063022323207 0.8775376426432459 1.0920519619010292 0.9410528610634367 0.9312655604246882 1.1374271110122003 1.093544709395646 0.8565741127388765 1.0 20.650261298550596 -5.234268133847374 22.736735637434535 1.0107932886207718 0.8769550495421178 0.2902099571455632 0.0877901206826801 291.6637833480671 244060.3848356485 0.02399605850289433 0.041537997625268296 5.830849958600709e-06 5.234268133847374 -0.133838239078654 RES(ph)EVLDLK ddPTM_KYSE-520_SHP099_60min_R1 1 RESEVLDLK 9 1 O95613-2;O95613 O95613-2 PCNT Pericentrin 1 RES(1)EVLDLK 92.06299999999999 0.0022499000000000004 0.0 266360.0 211260.0 214070.0 220520.0 236920.0 218240.0 220990.0 224900.0 268020.0 248080.0 True False 251584.4798245038 201110.75249227489 227869.2947241104 241478.1544982443 255564.25610959792 216877.88320798244 243329.8258545591 224119.87439205433 219354.32423437547 245882.20420331953 1.0231910871291403 0.8179150383977231 0.9267417113915479 0.982088782230724 1.0393767899456128 0.8820397714860507 0.9896195076132884 0.9114928634962538 0.892111427685884 1.0 17.90760779767225 -5.007409367374337 24.9662826210025 0.9546748819758079 0.9084969063945614 0.04683099750845987 0.06604240307443754 904.1259942747421 3046544.3503662343 0.017065076515448186 0.03333096766684067 9.830840107405367e-06 5.007409367374337 -0.04617797558124648 RES(ph)KPEEPPPPK ddPTM_KYSE-520_SHP099_60min_R1 1 RESKPEEPPPPK 12 2 E7EN32;A0A5F9ZHS3;O00255-3;O00255-2;O00255 E7EN32 MEN1 Menin 1 RES(1)KPEEPPPPK 85.16 0.0021338 308370000.0 240960.0 235160.0 225090.0 215450.0 213640.0 305430.0 312300.0 306140.0 316390.0 288480.0 True False 227593.46845814865 223862.56061764387 239599.66155673368 235926.3032225957 230452.25255467914 303523.69807649415 343870.33175428223 305078.0717936133 258941.5515428477 285924.29163404385 0.7959920689405671 0.7829434824802044 0.8379828806689803 0.8251355695393631 0.8059904642507126 1.0615526800534174 1.2026621795198984 1.066988992261226 0.9056297737523767 1.0 18.125273668491968 -6.262041861478219 24.63033042223737 1.0612595148895307 0.8105663981414135 0.7374792426212107 0.0706832878094219 23.12003325173499 945163.3168570473 0.025354684650948457 0.023711521719256144 5.469632387765858e-07 6.262041861478219 -0.25069311674811723 RES(ph)LDILAPGR ddPTM_KYSE-520_SHP099_60min_R1 2 RESLDILAPGR 11 1 A0A5F9ZHW8;O94827-5;O94827-3;O94827;O94827-7;O94827-2;O94827-6;Q5SY18;O94827-4 A0A5F9ZHW8 PLEKHG5 Pleckstrin homology domain-containing family G member 5 1 RES(1)LDILAPGR;RES(1)LDILAPGR 221.62 4.4132e-10 772060000.0 451990.0 382750.0 401020.0 301410.0 312870.0 344020.0 316140.0 319880.0 396490.0 411470.0 True False 426917.2136802738 364362.11548053735 426870.3908546861 330055.91577777907 337491.08901321114 341872.84357226023 348098.5164290707 318770.4109405533 324497.41069952806 407824.695918816 1.046815501740136 0.893428277215143 1.0467006905821647 0.8093083108519792 0.8275396080486359 0.8382838189875471 0.8535493801934084 0.7816358698493571 0.7956786676894241 1.0 18.637589615168547 -5.2699953126936405 24.95263645244081 0.8341248145136106 0.9854261697022991 0.493412006517306 0.06984872499836209 462.98492123314776 1350254.3624961039 0.018288388040082468 0.02762563378417762 5.3703759254368675e-06 5.2699953126936405 0.15130135518868848 RES(ph)LGLESK ddPTM_KYSE-520_SHP099_60min_R1 9 RESLGLESK 9 1 Q96BH1 Q96BH1 RNF25 E3 ubiquitin-protein ligase RNF25 1 RES(1)LGLESK;RES(1)LGLESK;RES(1)LGLESK;RES(0.997)LGLES(0.003)K;RES(0.998)LGLES(0.002)K;RES(1)LGLESK;RES(1)LGLESK;RES(1)LGLESK;RES(1)LGLESK 208.35 8.9606e-06 10866600000.0 12991140.0 11097530.0 9647180.0 8546890.0 8167920.0 9735210.0 9939960.0 9787460.0 11616920.0 12168420.0 True False 12270495.567004474 10564388.001067873 10269052.658833746 9359183.855883827 8810688.834892409 9674448.943297198 10944788.161461074 9753509.585670331 9507580.166721899 12060617.265687509 1.0174019535396475 0.8759409048758713 0.8514533238733336 0.7760120108040185 0.73053382267248 0.8021520565801415 0.9074815923890586 0.8087073298826167 0.7883162161003975 1.0 23.523800410865555 -4.222535146042215 1.7634896792869748 0.8213357270416405 1.0955981382289153 0.36550896269138167 0.0720038364099506 1.01551157837806 2.9366643427637977 0.019361802871310268 0.48117538401867205 5.990524572794879e-05 4.222535146042215 0.2742624111872748 RES(ph)LSTSSDLYK ddPTM_KYSE-520_SHP099_60min_R1 3 RESLSTSSDLYK 12 1 Q8TB72-4;Q8TB72-3;Q8TB72 Q8TB72-4 PUM2 Pumilio homolog 2 1 RES(0.981)LS(0.012)T(0.002)S(0.002)S(0.001)DLY(0.002)K;RES(0.562)LS(0.033)T(0.092)S(0.092)S(0.221)DLYK;RES(0.626)LS(0.036)T(0.151)S(0.151)S(0.036)DLYK 135.14 4.7107e-05 1540080000.0 1753214.0 1328186.0 1139412.0 1173548.0 1031390.0 1106153.0 1307973.0 1377485.0 1364424.0 1305485.0 True False 1655959.7244745402 1264377.950912168 1212860.3206436585 1285081.6490799284 1112554.5251936454 1099249.0888203792 1440195.6754263334 1372706.8260424167 1116678.9959300184 1293919.4185519621 1.2798012772138012 0.9771690051047737 0.9373538284176787 0.9931697682673901 0.8598329302752995 0.8495498815919771 1.1130489694930699 1.0608905055143436 0.8630205095613332 1.0 20.303316342701436 -4.262130173631719 5.029053236778011 0.9607027195629017 1.2951112772986773 0.5717581433027028 0.08274409331926233 0.12677428199208382 10.214254951780067 0.021725485828988828 0.14776123116546375 5.468520271617049e-05 4.262130173631719 0.3344085577357756 RES(ph)LSTSSDLYKR ddPTM_KYSE-520_SHP099_60min_R1 1 RESLSTSSDLYKR 13 2 Q8TB72-4;Q8TB72-3;Q8TB72 Q8TB72-4 PUM2 Pumilio homolog 2 1 RES(0.993)LS(0.006)T(0.001)SSDLYKR 103.13 0.00076442 580240000.0 215680.0 200890.0 162300.0 149000.0 99280.0 140950.0 107200.0 146850.0 213240.0 176300.0 True False 203715.80045257957 191238.94285796248 172762.1176891815 163160.91520151633 107092.7711740711 140070.2787672522 118036.82217117854 146340.61162504752 174520.99134295282 174738.11915932436 1.1658349158882366 1.0944317346325152 0.9886916404980807 0.933745401326816 0.6128758377925829 0.8016011585859958 0.675506997208513 0.837485331358155 0.9987574101322817 1.0 17.41483484126717 -5.098991797981648 1.7588228336822533 0.8066676900918694 1.1390760163257287 0.5018912122991506 0.1186175969716457 0.2941530147115008 1.7541590218129308 0.03682419899042891 0.09361573915508734 7.961743867015437e-06 5.098991797981648 0.3324083262338593 RES(ph)LSYIPK ddPTM_KYSE-520_SHP099_60min_R1 5 RESLSYIPK 9 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RES(0.983)LS(0.015)Y(0.002)IPK;RES(1)LSYIPK;RES(0.999)LS(0.001)YIPK;RES(0.991)LS(0.009)YIPK;RES(1)LSYIPK 146.79 0.00021092 5820990000.0 12356290.0 10869360.0 10377300.0 11130880.0 11193950.0 10605560.0 11174660.0 11861780.0 12338390.0 11987660.0 True False 11670861.962046565 10347179.630358016 11046237.362267053 12188755.488578903 12074850.180136904 10539366.766107261 12304303.686971854 11820634.253740264 10098049.401500555 11881458.658658363 0.982275181637035 0.8708677888482763 0.929703808228743 1.0258635609270588 1.0162767490957527 0.8870431711199802 1.0355886461806902 0.9948807291540948 0.8498998053695885 1.0 23.502208627490905 -5.0275671845249645 23.83818999300582 0.9737698034434344 0.9200000601501711 0.0980469044237835 0.06215570748299434 797.4779675521588 689604.8673595315 0.016592485886174686 0.028854076568910245 9.384968417769148e-06 5.0275671845249645 -0.05376974329326334 RES(ph)PLKIDPFEDLSFNLLAVSK ddPTM_KYSE-520_SHP099_60min_R1 1 RESPLKIDPFEDLSFNLLAVSK 22 2 A0A0D9SGJ6;J3KQV8;O43426 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 RES(1)PLKIDPFEDLSFNLLAVSK 114.91 0.00010125 79284000.0 147150.0 175610.0 180810.0 150730.0 179890.0 167110.0 127240.0 173850.0 191670.0 137300.0 True False 138987.29616374738 167173.4320040162 192465.30190622876 165055.33388137305 194046.31956591102 166067.00450369302 140102.66094273108 173246.9549268949 156867.55960750225 136083.62881778379 1.0213373744600212 1.2284610092802692 1.4143163551579017 1.21289632937686 1.4259343409025298 1.2203305125413508 1.0295335460985449 1.2730918217860936 1.1527291046709827 1.0 17.05413399209409 -6.532209146969604 24.720603196437395 1.1349299169687006 1.2705387410321163 0.22304763085799406 0.12678103151978734 301.4001552871626 798541.0930911372 0.04851184739708241 0.03762853656916053 2.936235283069667e-07 6.532209146969604 0.13560882406341568 RES(ph)PS(ph)PAPKPR ddPTM_KYSE-520_SHP099_60min_R1 17 RESPSPAPKPR 11 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR;RES(1)PS(1)PAPKPR 155.14 0.00018853 158788650000.0 83390860.0 75425290.0 71497660.0 72321070.0 73217310.0 72828570.0 70656310.0 74722340.0 87975090.0 68847530.0 True False 78765002.76024203 71801745.85273162 76106513.56390081 79194442.74867743 78979095.74749222 72374019.88024361 77798939.35393347 74463145.64286524 72001031.327544 68237594.4467678 1.1542757830023838 1.0522314925498173 1.115316478854945 1.1605690879161497 1.1574132468738163 1.0606179843678785 1.1401184344888429 1.091233450513177 1.055151957088875 1.0 26.02406345300007 -7.932727891693336 1.5156322798220292 1.0002746906518198 1.118710314074761 0.53256730277139 0.035956351267671556 0.3118462575686985 1.603523783410196 0.03459384635412857 0.010287919152471117 1.1675409136532074e-08 7.932727891693336 0.11843562342294112 RES(ph)PSEER ddPTM_KYSE-520_SHP099_60min_R1 2 RESPSEER 8 1 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RES(0.925)PS(0.075)EER;RES(0.985)PS(0.015)EER 84.68700000000001 0.015819999999999997 676320000.0 1176600.0 948810.0 934590.0 989360.0 1019750.0 1057350.0 1026140.0 1118100.0 1150760.0 1153400.0 True False 1111331.6525060511 903227.7434071542 994835.1667968704 1083388.4769380686 1099998.523416186 1050750.6864459317 1129872.2453613163 1114221.5720665008 941810.992298895 1143181.7733316203 0.9721390582245315 0.7900998463042684 0.8702335796498772 0.9476957227726841 0.9622253862659272 0.9191457657548957 0.9883574701059872 0.974667019768239 0.8238506021261498 1.0 20.124623389004107 -5.259431187343755 20.63884424897384 0.9455092431985372 0.868751670584637 0.19665580979509034 0.061897265483684315 22.249102170956323 228629.73140965146 0.016422009348313435 0.0266426997086107 5.50261100822508e-06 5.259431187343755 -0.07675757261390026 RES(ph)PSEERLEPK ddPTM_KYSE-520_SHP099_60min_R1 4 RESPSEERLEPK 12 2 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RES(0.973)PS(0.027)EERLEPK;RES(0.894)PS(0.106)EERLEPK;RES(0.991)PS(0.009)EERLEPK;RES(0.989)PS(0.011)EERLEPK 166.48 2.1169e-06 5456850000.0 3461380.0 3386280.0 3319450.0 2959050.0 3114460.0 3044400.0 2596180.0 2967720.0 4469360.0 3092740.0 True False 3269370.351310036 3223598.0258900924 3533427.0583077827 3240277.222329175 3359550.2831466272 3025398.7703371593 2858627.210675096 2957425.6719910526 3657836.8873970215 3065340.7297153133 1.0665601770194308 1.0516279624775928 1.1527028705340505 1.0570691835064314 1.095979396541225 0.9869698141577026 0.9325642604633335 0.9647950856887993 1.1932888412495453 1.0 21.547616015752215 -6.2566682034840015 24.64189557252203 1.0081383338956098 1.0851788239905393 0.19199859838812372 0.07023086497182497 548.2191108275225 2831407.6247025835 0.02387438770777047 0.023138332583749244 5.537730245370219e-07 6.2566682034840015 0.07704049009492953 RES(ph)PSPAPK ddPTM_KYSE-520_SHP099_60min_R1 5 RESPSPAPK 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RES(1)PSPAPK;RES(0.997)PS(0.003)PAPK;RES(0.527)PS(0.473)PAPK;RES(0.705)PS(0.295)PAPK;RES(0.998)PS(0.002)PAPK 152.69 0.00025241 9804400000.0 11021400.0 9056600.0 8205900.0 9250900.0 9546800.0 10037300.0 10261400.0 10535800.0 10441900.0 10123600.0 True False 10410020.9713838 8621507.341766251 8734865.443904232 10130102.754615499 10298078.846138405 9974653.487552602 11298722.453613156 10499253.768874211 8545914.178878164 10033912.780041616 1.0374837014818683 0.8592368232376136 0.8705343204974524 1.0095864870148377 1.026327323337137 0.9940940993022297 1.1260534849463077 1.0463768221862761 0.8517030560477643 1.0 23.25838096682958 -5.31081621502822 10.196654433187836 1.0148664917248948 0.9161392859364724 0.1958124255195981 0.07799428713811461 0.9328262806273707 190.01928260685884 0.02222094305131049 0.033022257680556 4.88859191270879e-06 5.31081621502822 -0.09872720578842242 RES(ph)PSPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 14 RESPSPAPKPR 11 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RES(0.983)PS(0.017)PAPKPR;RES(0.865)PS(0.135)PAPKPR;RES(0.9)PS(0.1)PAPKPR;RES(0.992)PS(0.008)PAPKPR;RES(0.991)PS(0.009)PAPKPR;RES(0.985)PS(0.015)PAPKPR;RES(0.994)PS(0.006)PAPKPR;RES(0.998)PS(0.002)PAPKPR;RES(0.883)PS(0.117)PAPKPR;RES(1)PSPAPKPR;RES(0.576)PS(0.424)PAPKPR;RES(0.97)PS(0.03)PAPKPR;RES(0.974)PS(0.026)PAPKPR;RES(0.998)PS(0.002)PAPKPR 159.66 4.6697e-05 608277850000.0 38924978.0 34402421.0 33472022.0 32116360.0 32597170.0 32238370.0 31569706.0 31430830.0 39831090.0 30439040.0 True False 36765731.8753201 32749677.056073282 35629682.09524879 35168689.1982643 35162381.826473504 32037158.374613877 34761079.97311932 31321803.786740854 32598768.11606821 30169373.78681476 1.218644183174535 1.0855272398920728 1.1809884536224748 1.1657082923489266 1.16549922696244 1.0619099554733022 1.1521975967665368 1.0381986715425215 1.0805251824721398 1.0 24.846581415584023 -7.365817877835965 0.479185872724546 0.9993370875971168 1.1691241628260836 0.5941049182895993 0.04302227223936543 0.6321859138864858 0.3578384094804807 0.0440182086495439 0.029790193210490888 4.307071904527804e-08 7.365817877835965 0.16978707522896674 RES(ph)SVGYR ddPTM_KYSE-520_SHP099_60min_R1 1 RESSVGYR 8 1 Q13671;Q13671-2;E9PNR2 Q13671 RIN1 Ras and Rab interactor 1 1 RES(0.5)S(0.5)VGYR 90.306 0.0055427 0.0 477600.0 377790.0 414400.0 377420.0 342470.0 336890.0 350040.0 373260.0 412940.0 429010.0 True False 451106.57592800446 359640.4013256493 441112.8870634432 413289.8833245396 369420.44061224896 334787.34454699955 385425.45926118747 371965.2481795388 337960.5053702822 425209.30516472895 1.0609047601939068 0.8457961689862882 1.0374017729752012 0.971968106776093 0.8687966987672883 0.7873471734521442 0.9064370289635855 0.874781533850575 0.7948097590182182 1.0 18.697813643196984 -5.76664368910349 6.705114656408461 0.8629348053468829 0.9740196683095916 0.31250462112701005 0.07693549696715814 0.16544034280912384 34.821584486717505 0.022328138171923726 0.026839169178618193 1.7114188491631704e-06 5.76664368910349 0.1110848629627087 RES(ph)VAS(ph)GDDR ddPTM_KYSE-520_SHP099_60min_R1 1 RESVASGDDR 10 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 RES(1)VAS(1)GDDR 88.28200000000001 0.010506999999999999 95030000.0 225040.0 178970.0 158110.0 199380.0 184930.0 192470.0 205290.0 213540.0 218910.0 176490.0 True False 212556.58259388187 170372.01256055347 168302.02358494455 218329.0152542174 199482.93889223348 191268.72333687832 226042.71663732524 212799.27958061054 179161.46227202145 174926.43590714224 1.2151198387573345 0.9739637789853192 0.9621302961565272 1.2481190399952753 1.1403818860067942 1.0934237717986275 1.292215870432057 1.216507261907358 1.0242103278610635 1.0 17.416388808694087 -5.258504827479281 24.998840296247767 1.157795968466855 1.0427605563974514 0.12906610693853204 0.10853924334500677 442.08698509864143 3766031.6137248385 0.029465573328770728 0.0482529005661062 5.514360727597424e-06 5.258504827479281 -0.11503541206940371 RES(ph)VAS(ph)GDDRAEEDMDEAIEK ddPTM_KYSE-520_SHP099_60min_R1 2 RESVASGDDRAEEDMDEAIEK 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 RES(1)VAS(1)GDDRAEEDMDEAIEK;RES(1)VAS(1)GDDRAEEDMDEAIEK 199.2 1.3290999999999999e-13 4492200000.0 4346200.0 3714900.0 3142600.0 4370900.0 4043700.0 3906500.0 4391500.0 4692400.0 4973400.0 4449800.0 True False 4105107.622065095 3536430.6278214213 3345177.0243377807 4786309.021840991 4361916.1844942635 3882118.0844574 4835435.676909802 4676123.159614398 4070355.929211417 4410378.233892011 0.9307835755489104 0.801842935067417 0.75847849026449 1.0852377660174588 0.9890118155795945 0.8802233909610878 1.0963766417472751 1.0602544524821573 0.9229040488936624 1.0 22.072470955891788 -5.259312249582438 24.99732653561815 1.0053287774687276 0.8275157919243892 0.5306844800030046 0.07518066087758543 148.80613438013663 1748708.9053071602 0.021090085768260557 0.03440330851537307 5.5041181833975074e-06 5.259312249582438 -0.17781298554433844 RES(ph)VNLGK ddPTM_KYSE-520_SHP099_60min_R1 6 RESVNLGK 8 1 P46013 P46013 MKI67 Antigen KI-67 1 RES(1)VNLGK;RES(1)VNLGK;RES(1)VNLGK;RES(1)VNLGK;RES(1)VNLGK;RES(1)VNLGK 115.65 0.00065999 5135570000.0 6286530.0 5882820.0 5942750.0 5171930.0 4946100.0 4770750.0 5754980.0 6208440.0 7004140.0 5669050.0 True False 5937803.649013132 5600200.496907161 6325829.173736191 5663468.672202545 5335329.93054062 4740973.979630138 6336749.541592249 6186904.370700787 5732364.736000891 5618826.627454158 1.0567693297387786 0.9966850497831722 1.1258274357189715 1.007945083147834 0.9495452136699958 0.843765841869058 1.1277709674525722 1.1011025576889921 1.0202067292825827 1.0 22.42183745502032 -9.898091343155258 11.849919857604462 1.0000118171335977 1.0247495244665736 0.008567268846337184 0.08196745592853531 0.0 0.0 0.08437830414511703 0.02046474473534177 1.2644703692805654e-10 9.898091343155258 0.024737707332975978 RES(ph)WISDIR ddPTM_KYSE-520_SHP099_60min_R1 1 RESWISDIR 9 1 I3L359;I3L2Y6;I3L1M1;I3NI06;I3L1G9;I3L167;A0A0A6YYL4;P57737-2;P57737-4;P57737;P57737-3 I3L359 CORO7;CORO7-PAM16 Coronin;Coronin-7 1 RES(0.85)WIS(0.15)DIR 59.13 0.042568 295810000.0 276060.0 251620.0 271310.0 243240.0 262820.0 258270.0 254460.0 248880.0 340810.0 324520.0 True False 260746.40148803327 239531.79751067996 288799.07671134826 266357.45646722737 283502.4387587568 256658.04112960803 280183.3000902809 248016.69336902857 278927.49512095214 321645.00527273933 0.8106651656752232 0.7447085873681409 0.897881428211393 0.8281100346680937 0.881414087305228 0.7979543811413284 0.8710948265859098 0.7710882783916463 0.8671905067651685 1.0 18.2951097601237 -13.99999999366751 0.4172280229795362 4.09077636557119 0.8267008714357954 0.5410874237045928 0.04716743993711072 696.4370087962988 4.596019659949435 1970.9073738001496 0.02746678263539908 1.0000000145810973e-14 13.99999999366751 -3.264075494135395 RESCGS(ph)SVLTDFEGK ddPTM_KYSE-520_SHP099_60min_R1 2 RESCGSSVLTDFEGK 15 1 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;H0Y704;O15231-9;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RES(0.016)CGS(0.818)S(0.166)VLTDFEGK;RES(0.224)CGS(0.388)S(0.388)VLTDFEGK 239.39 1.0556999999999999e-18 3891420000.0 3185100.0 2836700.0 2439820.0 2575220.0 2640070.0 2655030.0 2954400.0 3068000.0 3439000.0 2968200.0 True False 3008416.1536605633 2700420.67402649 2597094.7010500273 2819968.1345318737 2847828.4890565067 2638458.9729366275 3253059.584165388 3057357.8240765864 2814564.2901351294 2941904.057224659 1.0226085199048438 0.9179159556188995 0.8827938133033751 0.9585520396583507 0.9680222174692871 0.8968541874970946 1.1057667146474748 1.0392445724286619 0.9567151869630788 1.0 21.48831876682677 -6.747279103836577 24.993071541333002 1.0287020198169485 0.9394329214280407 0.3986558502472828 0.05063697631383032 231.0727608982362 407846.6476165668 0.019569146242606396 0.015083697891044768 1.7894554723718973e-07 6.747279103836577 -0.08926909838890784 RESDES(ph)GESAPDEGGEGAR ddPTM_KYSE-520_SHP099_60min_R1 1 RESDESGESAPDEGGEGAR 19 1 Q7Z3C6;H7C152;Q7Z3C6-2 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 RES(0.105)DES(0.895)GESAPDEGGEGAR 255.63 4.9347999999999997e-29 99592000.0 135700.0 115400.0 122520.0 112410.0 124240.0 121530.0 107570.0 121340.0 155980.0 109000.0 True False 128172.45048875653 109856.01078106859 130417.83523893112 123093.41260270121 134016.9811710977 120771.48619073532 118444.22538203045 120919.09986096896 127657.96393581772 108034.34480071682 1.1864046634909207 1.0168619153817433 1.2071886535666367 1.1393914854555074 1.2405034845012406 1.1178990015954073 1.096357140875117 1.1192653603261047 1.1816424135426487 1.0 16.721130501611277 -10.012067850850134 5.834818783120824 0.9999997544066328 1.1427649822914199 0.34223459664163813 0.06025470967673557 1.8909565995982716e-07 3.205209287421085e-08 0.05730846721005867 0.01389932109643664 9.725952610573953e-11 10.012067850850134 0.14276522788478707 RESLS(ph)TSSDLYK ddPTM_KYSE-520_SHP099_60min_R1 1 RESLSTSSDLYK 12 1 Q8TB72-4;Q8TB72-3;Q8TB72 Q8TB72-4 PUM2 Pumilio homolog 2 1 RES(0.302)LS(0.515)T(0.064)S(0.064)S(0.054)DLYK 136.33 4.4928999999999996e-05 893780000.0 996420.0 826290.0 664560.0 691250.0 568900.0 658600.0 849040.0 817090.0 744810.0 764810.0 True False 941146.5962859743 786593.788113424 707398.6009335957 756946.1921681092 613669.1934017821 654489.4331047348 934869.2490318797 814255.7055002386 609571.2791321732 758034.3784131765 1.2415618909740134 1.0376756127605082 0.9332012123439853 0.9985644632010685 0.8095532483452798 0.8634033649961939 1.2332808057978566 1.0741672524203354 0.8041472741753651 1.0 19.531903753494802 -4.301648035531213 2.791056671985682 0.969012972473086 1.2791612132549748 0.31890576115201397 0.12169554922308032 0.4983103668086671 5.665893717105136 0.03326470316294179 0.33756279073520534 4.992889613631851e-05 4.301648035531213 0.31014824078188874 RESPS(ph)PAPK ddPTM_KYSE-520_SHP099_60min_R1 4 RESPSPAPK 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RES(0.199)PS(0.801)PAPK;RES(0.467)PS(0.533)PAPK;RES(0.099)PS(0.901)PAPK;RES(0.295)PS(0.705)PAPK 142.76 0.00027757 4736010000.0 6420900.0 5181680.0 4604910.0 5438400.0 5425470.0 5634150.0 5876480.0 6125000.0 5780770.0 5652330.0 True False 6064719.877253178 4932744.314939752 4901749.86671651 5955263.900885425 5852423.622298419 5598985.179968176 6470531.947317977 6103753.804585743 4731127.889352846 5602254.753646201 1.0825498203747308 0.8804926822953381 0.8749601869722594 1.0630119769204478 1.0446550325990434 0.9994163825420654 1.1549870957058248 1.0895173591692064 0.8445042393464192 1.0 22.41757615849622 -5.275876944094711 24.88392640821496 1.0365355074017788 0.9394500713901847 0.13652191882467268 0.09236120864203796 1236.7856144884117 2131664.782942864 0.026106974190743044 0.038919822131795116 5.2981354354106814e-06 5.275876944094711 -0.09708543601159414 RESPSPAPKPR ddPTM_KYSE-520_SHP099_60min_R1 3 RESPSPAPKPR 11 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 0 ;; 142.1 0.00096297 1255890000.0 678810.0 562273.0 623250.0 539610.0 598669.0 553300.0 486126.0 586670.0 669170.0 480290.0 False True 641155.0561258125 535260.5610910204 663425.6922352576 590894.3721603373 645780.8443393422 549846.6494637864 535268.3602125588 584634.9786998077 547665.5964029442 476035.0042599662 1.3468653573544205 1.1244142894977334 1.3936489676144823 1.2412834494785294 1.3565826852234517 1.155055079024212 1.1244306730020315 1.2281344301742445 1.150473371709993 1.0 18.860708137498378 -6.3415651731976155 7.626443636880616 1.1446584413061078 1.2858257710808545 0.45341337813939087 0.08763886528203983 0.3063406202494731 26.02528815548293 0.02944152236843841 0.02593768144910932 4.554438340232583e-07 6.3415651731976155 0.14116732977474666 RESSVGY(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 RESSVGYR 8 1 Q13671;Q13671-2;E9PNR2 Q13671 RIN1 Ras and Rab interactor 1 1 RESSVGY(1)R;RESS(0.002)VGY(0.997)R 143.28 0.00039385 525120000.0 85669.0 67826.0 63383.0 78919.0 83348.0 92990.0 80492.0 87169.0 95470.0 106852.0 True False 80916.76979308254 64567.53715109843 67468.76959638557 86419.43803213743 89907.01341475094 92409.6149171109 88628.91688621746 86866.63108439755 78135.05460284988 105905.37440959795 0.7640478138543765 0.6096719596248067 0.6370665320104003 0.8160061612917111 0.848937213205328 0.8725677561906248 0.8368689254941648 0.8202287331371262 0.7377817701739666 1.0 16.69241627847276 -5.33341940594403 4.885231528470108 0.8425564346128332 0.664320392038618 0.5633798551470086 0.07156457950316981 0.15367186902297308 6.933886151480657 0.01970793504260181 0.03003219540290369 4.640669010547463e-06 5.33341940594403 -0.17823604257421521 RET(ph)DDEGEDD ddPTM_KYSE-520_SHP099_60min_R1 1 RETDDEGEDD 10 1 Q92688 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 1 RET(1)DDEGEDD 134.18 0.00071969 586180000.0 191390.0 149160.0 149190.0 219030.0 165890.0 228190.0 287200.0 179360.0 224620.0 240980.0 True False 180773.2151734937 141994.1297062755 158807.02611243993 239846.54534622937 178944.59921501458 226765.78156721758 316232.9788018885 178737.84202293874 183834.6702094077 238845.10467960325 0.7568638068424739 0.5945029934641212 0.6648954615396881 1.0041928456853637 0.7492077321620567 0.9494261223038698 1.3240086256994739 0.7483420782800012 0.769681549286979 1.0 17.86571578236663 -5.251594002524593 23.896607396417753 0.9335650588771612 0.664328922445258 0.3487248627883015 0.16452699396120632 443.68007344712976 1076890.726646873 0.04683370158597924 0.07974325396325464 5.60281132053303e-06 5.251594002524593 -0.26923613643190325 RET(ph)PS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RETPSPR 7 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RET(1)PS(1)PR;RET(1)PS(1)PR 79.97399999999999 0.0093194 238630000.0 279160.0 195414.0 188400.0 226450.0 241260.0 239560.0 210918.0 218940.0 257530.0 217371.0 True False 263674.4383083365 186026.01811760603 200544.5654506583 247971.73991532467 260245.7894183759 238064.8171797301 232239.64980131184 218180.5482409799 210769.04380299523 215445.26205207923 1.2238581428845667 0.8634491023183339 0.9308376686519149 1.1509732799572212 1.207943896930382 1.104989800714128 1.0779519938812714 1.0126959681677263 0.9782950982326378 1.0 17.71696184631686 -7.369404916741773 3.6557830641345377 0.9907835209246328 1.0746108043585667 0.11471475372268791 0.10601178091151305 0.6637121595605442 16.013567787612583 0.0712329111296408 0.030943656683264126 4.271644314280189e-08 7.369404916741773 0.08382728343393386 RET(ph)PS(ph)PRPMR ddPTM_KYSE-520_SHP099_60min_R1 3 RETPSPRPMR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RET(1)PS(1)PRPMR;RET(1)PS(1)PRPMR;RET(1)PS(1)PRPMR 96.82 0.0024734 637940000.0 1640180.0 1513580.0 1432310.0 1571630.0 1525350.0 1546340.0 1502110.0 1563110.0 1846760.0 1520370.0 True False 1549195.9457822305 1440865.3448701017 1524638.9943770284 1720997.2426722106 1645386.3669457026 1536688.7184743006 1653957.9379808663 1557687.9362426149 1511434.9370310998 1506900.7046299619 1.0280677028169913 0.9561780284812621 1.011771372654194 1.1420774025683549 1.0919009871654068 1.019767735029133 1.0975891994071476 1.0337031042965266 1.0030089788844125 1.0 20.523152924775125 -5.013928199778949 24.946421904436274 1.0600366177464875 0.9900858123638583 0.24713247460513688 0.04573857291481339 757.5845390024213 1356894.7859901018 0.012375944164796765 0.02261862591117718 9.684379511145807e-06 5.013928199778949 -0.06995080538262921 REVLYDS(ph)EGLS(ph)GEER ddPTM_KYSE-520_SHP099_60min_R1 1 REVLYDSEGLSGEER 15 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 REVLYDS(1)EGLS(1)GEER 99.93 0.00085465 553180000.0 227050.0 195820.0 211770.0 162530.0 185330.0 185910.0 182150.0 207880.0 255440.0 200400.0 True False 214455.0838870465 186412.5132681876 225421.0330439802 177976.80233357387 199914.4166165447 184749.66673018705 200563.499612688 207158.9127995567 209058.53511838242 198624.61190884054 1.0797004551755722 0.938516689733004 1.134909872838105 0.8960460671170849 1.0064936801905302 0.9301448846378542 1.0097615682427983 1.0429669858568837 1.0525308676969527 1.0 17.599684875142195 -9.615341764248852 7.161281265863726 0.9999768643011222 1.0068250871494897 0.0 0.06923756349604153 0.0 0.0 0.06375003992861844 0.015461655780178659 2.4247012466395113e-10 9.615341764248852 0.006848222848367502 REVS(ph)PAPAVAGQSK ddPTM_KYSE-520_SHP099_60min_R1 2 REVSPAPAVAGQSK 14 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 REVS(1)PAPAVAGQSK;REVS(1)PAPAVAGQSK 127.94 5.3104e-05 931910000.0 1564490.0 1309870.0 1398520.0 1206200.0 1388880.0 1466460.0 1247340.0 1253120.0 1607090.0 1391290.0 True False 1477704.620966504 1246941.8790450452 1488670.836911117 1320836.8853427458 1498176.9543537835 1457307.2791842844 1373433.300065277 1248773.2192004076 1315282.9674420666 1378964.2530072425 1.0716047335845935 0.9042597560638116 1.0795572355589542 0.9578470815775445 1.0864509004396323 1.0568129492887082 0.995989052703938 0.9055878109074151 0.9538194805077073 1.0 20.395153627570103 -7.028496403042281 8.962696475292507 0.9478468294929645 1.0229556947856633 0.23853503227363593 0.057981145666021396 0.4891501860748279 145.0289898667316 0.02580089021176463 0.015304915137853016 9.36490976162559e-08 7.028496403042281 0.07510886529269878 RFDAMPFTLR ddPTM_KYSE-520_SHP099_60min_R1 2 RFDAMPFTLR 10 1 Q9UQ80;Q9UQ80-2 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ; 248.98 1.4834e-13 1040370000.0 625960.0 616660.0 435710.0 369750.0 697340.0 569440.0 391590.0 438500.0 452620.0 419360.0 False True 591236.7509796763 587034.7279744697 463796.5637606493 404890.9288306089 752216.69067815 565885.9137369575 431175.73875011015 436978.9458466696 370435.6176216816 415644.7966571432 1.4224567605194278 1.4123471115138304 1.1158483577582843 0.9741272646427355 1.8097584685960546 1.3614651699916385 1.0373659004464288 1.0513278389651646 0.8912312161753014 1.0 18.664991625388044 -6.7986718171310665 5.389019799378363 0.993886617707431 1.3459534056146052 0.41208262095892967 0.2077148753996532 0.21437425148012604 15.295125886144666 0.09303127805206288 0.06370450865333148 1.5897476177744544e-07 6.7986718171310665 0.35206678790717416 RFDAQTGADR ddPTM_KYSE-520_SHP099_60min_R1 4 RFDAQTGADR 10 1 P43686;P43686-2 P43686 PSMC4 26S protease regulatory subunit 6B 0 ;;; 169.65 0.00013475 2217070000.0 1571270.0 1637760.0 1139530.0 1002790.0 1487440.0 1462900.0 1105710.0 1361010.0 1265650.0 1337190.0 False True 1484108.520850912 1559079.5512721238 1212985.9271124662 1098094.8601001927 1604493.0656240946 1453769.498464799 1217485.9574896796 1356288.9739721215 1035839.8644401059 1325343.5369180779 1.119791570645919 1.17635881403064 0.9152237841164673 0.8285360206710453 1.2106242803697103 1.0969001303958972 0.9186191531297555 1.0233489930663588 0.7815632970518898 1.0 20.337934932599126 -6.770134999667889 24.848317249923653 0.9328285803602194 1.0533203059826028 0.20288233033091418 0.12312120934116856 338.5415394232791 967394.026313555 0.0538093784790613 0.03691252834855903 1.6977158384796975e-07 6.770134999667889 0.12049172562238342 RFDDAVVQSDMK ddPTM_KYSE-520_SHP099_60min_R1 17 RFDDAVVQSDMK 12 1 E9PKE3;P11142;E9PNE6;P11142-2;E9PN89;E9PLF4;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PN25 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ;;;;;;;;;;;;;;;; 207.34 4.8523999999999995e-09 36898930000.0 67850150.0 68307650.0 45414080.0 41950040.0 67164740.0 65783340.0 47715950.0 56649580.0 58559340.0 54270460.0 False True 64086366.92357923 65026047.96212708 48341544.26189712 45936959.188860625 72450222.92290458 65372761.77396905 52539543.888795264 56453075.8290913 47926440.01683099 53789665.946179025 1.1914252635014113 1.2088948094080185 0.8987143424587689 0.8540108658571021 1.3469171382361247 1.2153405421662193 0.9767590663486438 1.0495152709365632 0.890997167834902 1.0 25.6808256934943 -6.796215466165198 24.74944101840851 0.9834439814670777 1.111565759365512 0.18368883229890642 0.14383353185608347 355.7283874509939 253161.25872909778 0.06582414946677527 0.04438096832990446 1.5987646380299063e-07 6.796215466165198 0.12812177789843426 RFDEILEASDGIMVAR ddPTM_KYSE-520_SHP099_60min_R1 41 RFDEILEASDGIMVAR 16 1 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;; 302.64 1.1224000000000002e-37 13104976600.0 5992117.1 5294793.2 3618768.5999999996 5563003.2 5276431.7 4256965.4 3982414.6 5066435.5 4557369.1 3333451.7 False True 5659722.41947371 5040423.387025374 3852040.2141904794 6091709.351550097 5691656.856000352 4230396.099897462 4384995.932389039 5048861.217765431 3729865.753365888 3303919.911324179 1.7130325708183853 1.5255888527289456 1.16589999684545 1.8437823903269492 1.7226981914701411 1.2804172659869228 1.3272101170974133 1.5281427374981063 1.128921358106103 1.0 21.655747284853977 -7.811237825888216 0.6111876498880219 0.9901197971035391 1.5641807608572498 0.4468056174448629 0.20144909831119365 0.7882723828588982 0.702846145359724 0.21277226888966688 0.09744711535364446 1.5444084676950494e-08 7.811237825888216 0.5740609637537106 RFDSEK ddPTM_KYSE-520_SHP099_60min_R1 6 RFDSEK 6 1 E9PM69;P17980;R4GNH3;E9PKD5 E9PM69 PSMC3 26S protease regulatory subunit 6A 0 ;;;;; 148.98 0.016728 8384650000.0 10581520.0 10250780.0 4697470.0 4716320.0 11948600.0 13866980.0 7017300.0 7991540.0 8085250.0 15604000.0 False True 9994541.991862847 9758317.142065542 5000276.432417746 5164557.634786682 12888886.84176575 13780431.034124952 7726677.166248236 7963819.212979455 6617172.412566171 15465760.69972829 0.6462366892847654 0.6309626362081874 0.3233126730394576 0.33393492470612296 0.833382016701719 0.891028336832281 0.4995989085996903 0.5149322666759849 0.42785948528755036 1.0 23.882574459858912 -5.758780115824187 24.999879798315256 0.6702981188150996 0.4826868875055029 0.20825179490486379 0.19807484102371312 138.54424452516503 1302449.4773349387 0.06357973923508516 0.07836246293259201 1.742688977026073e-06 5.758780115824187 -0.18761123130959667 RFDTEEEFK ddPTM_KYSE-520_SHP099_60min_R1 2 RFDTEEEFK 9 1 P54136-2;P54136 P54136-2 RARS Arginine--tRNA ligase, cytoplasmic 0 ; 188.99 1.2909000000000001e-05 727710000.0 634180.0 600870.0 352230.0 363580.0 564650.0 551030.0 406020.0 476590.0 449500.0 458110.0 False True 599000.771193513 572003.3032757422 374935.3093879261 398134.5338856874 609084.7425809746 547590.8173758002 447064.4639733386 474936.82052694185 367882.130972882 454051.5018041863 1.3192353043946923 1.2597762610692205 0.8257550253619033 0.8768488427054832 1.3414441757394466 1.2060103649033926 0.9846117944702648 1.0459976866936176 0.8102211522505532 1.0 18.792496422136782 -7.175362799736271 2.053223067897665 0.9285017591798004 1.1233289257164443 0.19383584717118463 0.17210924387924395 0.6659744653704647 5.339015448770704 0.12437750349774973 0.055503374437416 6.67785831393731e-08 7.175362799736271 0.1948271665366439 RFDYDWER ddPTM_KYSE-520_SHP099_60min_R1 3 RFDYDWER 8 1 O00507-2;Q93008;O00507;Q93008-3 O00507-2 USP9Y;USP9X Probable ubiquitin carboxyl-terminal hydrolase FAF-Y;Probable ubiquitin carboxyl-terminal hydrolase FAF-X 0 ;; 179.81 9.7871e-05 2450260000.0 757230.0 720230.0 522680.0 412528.0 694740.0 744570.0 542980.0 548130.0 588182.0 592420.0 False True 715224.9423994194 685629.0697127299 556372.7891175688 451734.5370889343 749412.0854701258 739922.8624457817 597869.7173741284 546228.6649645041 481382.97566160583 587171.6196957863 1.2180850000379404 1.1676808733840958 0.9475471403161917 0.7693398691901663 1.2763084255645671 1.260147523528361 1.018219711783558 0.9302708895356783 0.819833519731438 1.0 19.163422713200998 -7.150471679128861 3.6202513530077223 0.9051376568379855 1.0967030538294888 0.23703764379829073 0.1504589014840731 0.3996131121713031 9.486173048055178 0.08544378151609347 0.04596737781275232 7.071773150701317e-08 7.150471679128861 0.19156539699150332 RFEEGK ddPTM_KYSE-520_SHP099_60min_R1 5 RFEEGK 6 1 O00154-6;O00154-4;O00154-5;O00154-7;O00154 O00154-6 ACOT7 Cytosolic acyl coenzyme A thioester hydrolase 0 ;;;; 124.34 0.019083000000000003 4212040000.0 6396950.0 6218280.0 3344370.0 3380780.0 6925920.0 7825800.0 4682430.0 5387480.0 5644020.0 7640200.0 False True 6042098.431496321 5919544.494971426 3559953.441381195 3702088.3147314265 7470950.500905734 7776956.279366877 5155775.720512975 5368792.089327289 4619208.242165879 7572513.771985662 0.7978986388706116 0.7817145895291261 0.47011514915313324 0.4888849893449142 0.9865879053986458 1.0269979710221915 0.6808539245694932 0.7089841301034023 0.6099966776230282 1.0 22.852340866149028 -5.757903782395074 24.999999028964584 0.8228548862607492 0.6334050132264175 0.25863691985158954 0.16580300339939763 154.15247168048643 1089994.597709819 0.054452367743297474 0.06750489932042668 1.7462089813107893e-06 5.757903782395074 -0.1894498730343317 RFEELKK ddPTM_KYSE-520_SHP099_60min_R1 1 RFEELKK 7 2 J3KR23;P53990-6;P53990-2;P53990;P53990-4;P53990-5 J3KR23 IST1 IST1 homolog 0 103.56 0.0029103 390650000.0 596830.0 491440.0 400470.0 364430.0 535840.0 455720.0 391060.0 410220.0 433440.0 328060.0 False True 563722.6501488911 467830.4847335211 426284.9369746552 399065.3176301248 578007.5594874518 452875.6824392496 430592.16117780894 408797.0425660674 354738.22213322757 325153.64362681756 1.733711619716253 1.4387982232499765 1.3110261727957357 1.227313073225581 1.7776444176982298 1.3928051901488763 1.3242729079548754 1.257242693042826 1.090986458513639 1.0 18.310762064946914 -7.48077893337562 1.1114198482057975 1.0041772680795407 1.4732003441690358 0.5351548970398154 0.16061561900732108 0.41847080176338236 0.9324577181970729 0.15241204093345567 0.05449301742480924 3.305377501055621e-08 7.48077893337562 0.4690230760894951 RFEIINAIYEPTEEECEWKPDEEDEIS(ph)EELKEK ddPTM_KYSE-520_SHP099_60min_R1 2 RFEIINAIYEPTEEECEWKPDEEDEISEELKEK 33 3 P55209;P55209-2;H0YIV4;F5H4R6;F8VY35;F8W118;F8VV59;H0YH88;F8W543;F8VRJ2 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 1 RFEIINAIYEPTEEECEWKPDEEDEIS(1)EELKEK;RFEIINAIYEPTEEECEWKPDEEDEIS(1)EELKEK 134.61 1.4778e-06 318957000.0 247152.0 293837.0 204136.0 267217.0 228295.0 252553.0 189902.0 248844.0 358483.0 224344.0 True False 233441.9858747026 279720.62946167117 217294.9331891484 292613.2233382794 246260.5176791349 250976.7230472213 209099.14742491714 247980.81824462625 293391.5238210266 222356.48669699102 1.0498546246272453 1.2579827717949656 0.9772367625382565 1.3159644123044112 1.1075031870543912 1.1287132962719975 0.9403779963022177 1.1152398651744933 1.3194646496678832 1.0 17.762514966776678 -5.967954608645267 24.999756233674383 1.1001787042707996 1.1538626159627778 0.03305719621078074 0.12799678902723705 792.8838365724772 618554.500157128 0.03905080771721994 0.04427909668338389 1.0765777289160556e-06 5.967954608645267 0.05368391169197828 RFEIINAIYEPTEEECEWKPDEEDEISEELKEK ddPTM_KYSE-520_SHP099_60min_R1 2 RFEIINAIYEPTEEECEWKPDEEDEISEELKEK 33 3 P55209;P55209-2;H0YIV4;F5H4R6;F8VY35;F8W118;F8VV59;H0YH88;F8W543;F8VRJ2 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 0 ; 147.56 5.4886e-07 1655000000.0 1428520.0 1296170.0 842080.0 774140.0 1121270.0 1125410.0 879440.0 899820.0 1175700.0 897560.0 False True 1349277.1479159822 1233900.0476091662 896361.8241756377 847714.0328463216 1209507.5698463994 1118385.898740358 968342.3777072884 896698.7344395672 962222.5169851328 889608.3166911127 1.516709233266391 1.3870149642919734 1.0075915516501066 0.952907045652837 1.3595956188282368 1.257166640370653 1.088504187223683 1.0079702691796173 1.081624911696091 1.0 19.762810749900368 -4.623977378048294 4.725409063032341 1.105524294903374 1.4875377505147194 0.5926349475736925 0.12005087887948479 0.14570381804987773 5.32476502907679 0.03370118301077777 0.09679877022550606 2.3769640970088938e-05 4.623977378048294 0.3820134556113455 RFEKPLEEK ddPTM_KYSE-520_SHP099_60min_R1 3 RFEKPLEEK 9 2 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 ;; 125.74 0.00043687 6642300000.0 5511770.0 4949740.0 4126640.0 4101340.0 5340450.0 4759160.0 4481280.0 4976230.0 4946930.0 4231980.0 False True 5206021.130658907 4711947.060688787 4392649.817257446 4491130.120487163 5760713.031996054 4729456.31711924 4934291.515478161 4958968.619590812 4048692.213957011 4194487.949630617 1.2411577272780983 1.1233664555178278 1.047243398957501 1.0707219032260349 1.3734007824491101 1.1275408044826387 1.176375179695699 1.1822584017740516 0.9652411122825026 1.0 22.00006327090277 -7.761449086881697 24.999999999803116 0.9826204758836843 1.164828093477239 0.41832231502267625 0.0872706016474482 0.2663063412011805 663743.8739510587 0.07108167261956394 0.022873395850882713 1.7320120657187943e-08 7.761449086881697 0.18220761759355475 RFIGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RFIGSPR 7 1 P23443-3;P23443-5;P23443-2;P23443;K7ERJ3;P23443-4 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 RFIGS(1)PR;RFIGS(1)PR 96.331 0.0039404 1866790000.0 456030.0 412050.0 329670.0 269220.0 312430.0 329360.0 256540.0 318100.0 437880.0 333100.0 True False 430733.1068267332 392254.49950034067 350921.05569065025 294806.58785605535 337016.4635164689 327304.3420701114 282473.56678912474 316996.58534509834 358372.0300565191 330148.99314787897 1.3046627909411828 1.1881135718764517 1.06291723728949 0.8929501345594194 1.0208011246774085 0.9913837354139882 0.8555942094380411 0.9601622053201615 1.0854857579286894 1.0 18.33275772062134 -4.709512480109338 1.969641508508028 0.9682585974451144 1.300642809158654 0.7592564873810353 0.06221274664556356 0.1776655298001208 1.2572334139382662 0.01779260606170962 0.07776842112679416 1.9520346385671397e-05 4.709512480109338 0.3323842117135395 RFPEAEALS(ph)PEQAAHYLR ddPTM_KYSE-520_SHP099_60min_R1 8 RFPEAEALSPEQAAHYLR 18 1 Q2NKX8 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR;RFPEAEALS(1)PEQAAHYLR 217.11 1.6905e-18 8130560000.0 1918210.0 1746910.0 1634380.0 1638060.0 1503100.0 1553640.0 1469080.0 1592080.0 1835030.0 1474160.0 True False 1811803.067443166 1662985.8214346322 1739734.7499004607 1793740.7298993021 1621385.4185308851 1543943.1564665027 1617588.9432391303 1586557.446074266 1501834.809341865 1461100.089279125 1.2400266626067145 1.138173786749348 1.1907019667343994 1.2276645132396746 1.1097018133308318 1.0566991048698455 1.1071034456217257 1.0858649983773794 1.027879486396334 1.0 20.47862357933464 -6.3913706014810705 0.399400258769186 1.001214608191392 1.2303389069632653 0.7660480404647305 0.03735096618105351 0.7395431554376689 0.2533746940220948 0.04249907633687352 0.06451592446047953 4.060966421693147e-07 6.3913706014810705 0.22912429877187335 RFPEEPHVPLEQR ddPTM_KYSE-520_SHP099_60min_R1 1 RFPEEPHVPLEQR 13 1 J3KSX6;Q8TCD5;J3KRC4;Q8TCD5-2 J3KSX6 NT5C 5(3)-deoxyribonucleotidase, cytosolic type 0 91.743 0.0050695 185240000.0 125080.0 106990.0 84375.0 72910.0 104890.0 98914.0 89639.0 99402.0 96750.0 100580.0 False True 118141.5630592016 101850.03980473583 89813.94750477314 79839.34447880911 113144.2462575374 98296.64103571481 98700.58491233453 99057.19766260129 79182.63886902406 99688.93945005597 1.1851020154386371 1.02167843661094 0.9009419500321779 0.8008846810814807 1.1349729155682564 0.9860335718082476 0.9900856148819136 0.9936628698134442 0.7942971337225877 1.0 16.60514582513841 -4.34045341252079 3.1333058627986823 0.9541130105138177 1.201276062537435 0.3560445387636991 0.09540855774086539 0.3357350543770946 5.2655620306291855 0.024798639026181322 0.1814600495416184 4.566112290083335e-05 4.34045341252079 0.24716305202361732 RFPGYDS(ph)ESKEFNAEVHR ddPTM_KYSE-520_SHP099_60min_R1 3 RFPGYDSESKEFNAEVHR 18 2 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 1 RFPGY(0.002)DS(0.958)ES(0.04)KEFNAEVHR;RFPGYDS(0.993)ES(0.007)KEFNAEVHR;RFPGYDS(0.923)ES(0.077)KEFNAEVHR 173.01 8.3355e-09 2303090000.0 1118170.0 1060960.0 1040300.0 1074720.0 1096290.0 995180.0 1051070.0 1078030.0 1339060.0 1057630.0 True False 1056142.881083367 1009989.8890665729 1107359.4025388528 1176861.0656736495 1182561.7859631572 988968.7124767237 1157322.4130546686 1074290.5655440926 1095920.458955611 1048260.2210236895 1.0075197550203512 0.9634915728083784 1.056378349888589 1.1226802678101946 1.128118536071429 0.9434381775080007 1.1040411434524084 1.0248319491652396 1.04546603694012 1.0 19.99956546652331 -4.773145279193008 24.383780655045765 1.0570704966641875 0.9855056708241342 0.1939933190225619 0.05465506590327159 217.97702509626623 454056.8428863868 0.01436615930195661 0.030319716180253878 1.685988937896661e-05 4.773145279193008 -0.0715648258400533 RFPGYDSESK ddPTM_KYSE-520_SHP099_60min_R1 4 RFPGYDSESK 10 1 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 0 ;;; 165.63 0.00014688 9100300000.0 12149600.0 11618700.0 8011600.0 7454100.0 11658600.0 11303900.0 8432100.0 9792500.0 9909000.0 9809700.0 False True 11475637.468372863 11060520.211975755 8528040.555013234 8162535.422843106 12576065.491640063 11233348.167131191 9284498.95736563 9758532.103086693 8109775.385562373 9722793.68983112 1.1802819060508305 1.137586640714565 0.8771183290593262 0.8395257251401047 1.2934621357638312 1.1553621855496048 0.9549209058170293 1.0036757350197558 0.8340992974112192 1.0 23.212939478151934 -6.8543911491055045 9.006450680390357 0.9474747864786 1.0725158717213563 0.18576161085076393 0.13519932553798303 0.5971116221520427 52.21758925552703 0.06168311172915887 0.0415703901710644 1.398327345999678e-07 6.8543911491055045 0.12504108524275637 RFQDAVR ddPTM_KYSE-520_SHP099_60min_R1 1 RFQDAVR 7 1 Q01813-2;Q01813;B1APP6 Q01813-2 PFKP ATP-dependent 6-phosphofructokinase, platelet type 0 139.88 0.0041021 800020000.0 922910.0 863870.0 632000.0 549670.0 993430.0 824580.0 573240.0 694830.0 704020.0 758090.0 False True 871714.342524527 822368.3885046935 672739.7312357529 601910.4715356891 1071607.289156501 819433.490357579 631188.6934832683 692419.7969045418 576187.714899952 751373.912385096 1.1601605115054272 1.0944862137870064 0.8953461387823094 0.8010798107496664 1.426197092410201 1.0905801716703747 0.840046058399443 0.9215382454610177 0.7668455151323419 1.0 19.519171501081907 -6.758158027409314 24.939295950399284 0.8755689585733628 1.073666342216592 0.2542341951538776 0.16409118596102867 126.26690263006472 959678.2101949233 0.06795104152236996 0.05042117111957049 1.7451870134571277e-07 6.758158027409314 0.19809738364322915 RFS(ph)DATSK ddPTM_KYSE-520_SHP099_60min_R1 1 RFSDATSK 8 1 B8ZZD4;Q86VP1-3;Q86VP1-4;Q86VP1-2;Q86VP1 B8ZZD4 TAX1BP1 Tax1-binding protein 1 1 RFS(0.995)DAT(0.004)SK 51.013000000000005 0.04785 0.0 204330.0 194430.0 170850.0 150820.0 191820.0 198710.0 177670.0 164780.0 199160.0 186220.0 True False 192995.4075782436 185089.29095462034 181863.26436966547 165153.88745431358 206915.1426934964 197469.77718226827 195630.6174921015 164208.41663994108 162997.56441503722 184570.23567696786 1.0456475112055519 1.0028122371722 0.9853336519977138 0.8948023870076404 1.1210645201517555 1.0698896084625313 1.0599250565757057 0.8896798340082106 0.8831194467363264 1.0 17.493810393057394 -7.265067534477823 24.862503862177032 0.9147997252555911 1.0235510514414363 0.34264089991937097 0.06389685971943969 340.76321112343527 2335103.7993365526 0.03511104828752067 0.01788380236231741 5.4316586052499535e-08 7.265067534477823 0.10875132618584527 RFS(ph)DFLGLHSK ddPTM_KYSE-520_SHP099_60min_R1 6 RFSDFLGLHSK 11 1 O60749;D6RC15;O60749-2 O60749 SNX2 Sorting nexin-2 1 RFS(1)DFLGLHSK;RFS(1)DFLGLHSK;RFS(1)DFLGLHSK;RFS(1)DFLGLHSK;RFS(1)DFLGLHSK;RFS(1)DFLGLHSK 178.03 3.4499e-06 4864220000.0 4019630.0 3947610.0 3795790.0 3313185.0 3370080.0 3494040.0 3352462.0 3230796.0 3971670.0 3082639.0 True False 3796653.110966256 3757960.89011659 4040472.696878735 3628069.106254608 3635286.12286778 3472232.4003116726 3691361.5758361313 3219589.1227494525 3250514.8456530953 3055329.216716851 1.2426330655935027 1.2299692188833131 1.3224344776896038 1.187456031384141 1.1898181390659204 1.1364511494583915 1.2081714650059014 1.0537617698066297 1.063883665258824 1.0 21.542896410492578 -7.045066011322754 0.49455852866462147 0.9928870964307724 1.2665722148252392 0.8076666908156729 0.04128792312206512 0.3890904375471557 0.21389169248800052 0.042191135054892616 0.032444374737006815 9.014341121932458e-08 7.045066011322754 0.27368511839446674 RFS(ph)DFLGLYEK ddPTM_KYSE-520_SHP099_60min_R1 4 RFSDFLGLYEK 11 1 Q13596-2;Q13596;Q13596-3 Q13596-2 SNX1 Sorting nexin-1 1 RFS(1)DFLGLYEK;RFS(1)DFLGLYEK;RFS(1)DFLGLYEK;RFS(1)DFLGLYEK 153.74 3.295e-05 2405845000.0 2386800.0 2610230.0 2346380.0 2602680.0 2389010.0 2365330.0 2531870.0 2572050.0 3023270.0 2275280.0 True False 2254399.4460321586 2484830.6327648903 2497631.409140741 2850037.9246757273 2577011.495392498 2350567.0980953886 2787816.1282699783 2563128.1588709797 2474320.3784346716 2255122.7893410535 0.9996792443798121 1.1018604594435222 1.1075367695922884 1.2638060943495266 1.1427366649713564 1.0423233312196822 1.2362147823820173 1.1365803099439766 1.097199846558097 1.0 21.104774558348318 -4.275584428911422 2.013296521503183 1.1391416219241903 0.9626208665679526 0.19996855183064366 0.07503405530883314 1.0481615317954538 4.714181908661679 0.01970223357166288 0.3374456255131508 5.301705149422127e-05 4.275584428911422 -0.17652075535623768 RFS(ph)DGAASIQAFK ddPTM_KYSE-520_SHP099_60min_R1 3 RFSDGAASIQAFK 13 1 H0Y4E8;Q9Y2K2-8;Q9Y2K2-7;Q9Y2K2 H0Y4E8 SIK3 Serine/threonine-protein kinase SIK3 1 RFS(0.987)DGAAS(0.013)IQAFK;RFS(1)DGAASIQAFK;RFS(1)DGAASIQAFK 204.23 3.202e-09 7386000000.0 12338700.0 12247700.0 11176800.0 10505600.0 9902500.0 10228300.0 10232500.0 9927000.0 11768300.0 11248200.0 True False 11654247.71441136 11659302.107827488 11897274.4115123 11504049.065376181 10681770.412482256 10164461.38570477 11266900.959576348 9892565.553979227 9631473.37470115 11148549.698967192 1.045359982159026 1.045813349955969 1.0671589339207477 1.0318874989131477 0.9581309408767152 0.9117294769423158 1.0106158436572354 0.8873410283039488 0.8639216431526887 1.0 23.410352708151105 -5.77990627205662 2.875359429096155 0.932298346823003 1.0521463171416008 0.6156006891076298 0.04267669152721057 0.17567565420624343 2.980609758552212 0.01403739639555223 0.017371166169585665 1.6599451124355087e-06 5.77990627205662 0.11984797031859773 RFS(ph)DIQIR ddPTM_KYSE-520_SHP099_60min_R1 1 RFSDIQIR 8 1 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586;A0A494C1T2 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 1 RFS(1)DIQIR 73.632 0.019771 510790000.0 578840.0 552430.0 511720.0 474360.0 548060.0 475100.0 470010.0 508980.0 591330.0 566520.0 True False 546730.5913110675 525890.4335856644 544706.2899809489 519443.03177846555 591189.2039651632 472134.724670603 517523.1976555564 507214.46717682516 483959.37821622705 561501.0735458904 0.9736946500537442 0.9365795692333335 0.9700894898403629 0.9250971302657937 1.052872793691723 0.8408438503760338 0.9216780199321564 0.9033187843680436 0.8619028547176482 1.0 19.098929255384775 -6.275878440096708 24.99999379495521 0.900514214286203 0.967042621936362 0.29538841047634157 0.05050976453121706 1003.2176489834817 1736979.719411825 0.016725665609664042 0.014815776206554094 5.298117185103873e-07 6.275878440096708 0.066528407650159 RFS(ph)DQAAGPAIPTSNSYSK ddPTM_KYSE-520_SHP099_60min_R1 2 RFSDQAAGPAIPTSNSYSK 19 1 Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 RFS(1)DQAAGPAIPTSNSYSK;RFS(1)DQAAGPAIPTSNSYSK 154.77 4.1818000000000006e-07 1420830000.0 647090.0 698050.0 563140.0 500330.0 515310.0 539640.0 515120.0 557620.0 677460.0 733640.0 True False 611194.6277580662 664514.6302055883 599440.9054558581 547881.2127702998 555861.9652871727 536271.9065907061 567193.3566867303 555685.7463694857 554450.3413768373 727140.5203632824 0.8405454112950697 0.9138737446148566 0.8243811047091351 0.7534736373879646 0.7644491672798839 0.7375079390745305 0.780032663292314 0.7642068222134875 0.7625078314984175 1.0 19.47187466724926 -4.98705348182597 5.510005052719787 0.7809196457786779 0.8765349723851149 0.1476764547526871 0.07364759919977357 0.22659099976342606 22.56820981939638 0.01802878761934325 0.03666003857749357 1.0302592398559791e-05 4.98705348182597 0.09561532660643701 RFS(ph)DQAGPAIPTSNSYSK ddPTM_KYSE-520_SHP099_60min_R1 4 RFSDQAGPAIPTSNSYSK 18 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14 E7ETY4 MARK2 Serine/threonine-protein kinase MARK2 1 RFS(1)DQAGPAIPTSNSYSK;RFS(0.997)DQAGPAIPT(0.002)SNSYSK;RFS(1)DQAGPAIPTSNSYSK;RFS(1)DQAGPAIPTSNSYSK 189.88 1.1520000000000001e-12 6129220000.0 5286160.0 5128490.0 4375570.0 3974210.0 3647870.0 4027980.0 4507870.0 4571440.0 5262850.0 5598830.0 True False 4992926.1671012975 4882109.642379564 4657626.243359533 4351917.72351019 3934936.6154588885 4002839.882716683 4963569.492171548 4555582.741622117 4307249.105652131 5549228.722023822 0.899751373967581 0.8797816574046424 0.8393285763973486 0.7842383043680043 0.7090961307545103 0.7213326541813245 0.8944611478117842 0.8209398043987419 0.7761887861204003 1.0 22.403855836960744 -9.886766437038697 13.531606978984884 0.999997262108745 0.8124862818097026 0.43313124721939533 0.06385113699858898 0.0 0.0 0.06814431005344962 0.016527422831483077 1.297877079794204e-10 9.886766437038697 -0.18751098029904234 RFS(ph)DSEER ddPTM_KYSE-520_SHP099_60min_R1 6 RFSDSEER 8 1 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 RFS(0.98)DS(0.02)EER;RFS(0.983)DS(0.017)EER;RFS(0.953)DS(0.047)EER;RFS(0.999)DS(0.001)EER;RFS(0.562)DS(0.438)EER;RFS(0.878)DS(0.122)EER 111.27 0.00072985 6506890000.0 4878810.0 4564830.0 4382120.0 4158900.0 4420600.0 4439110.0 4360190.0 4607440.0 5641280.0 4358590.0 True False 4608172.683633388 4345528.714850475 4664598.466839909 4554160.605581118 4768476.070226618 4411403.867885755 4800960.55655365 4591457.866024578 4616965.757096108 4319976.283531705 1.0667124958996475 1.0059149471297284 1.0797740914972027 1.0542096314144485 1.1038199650319034 1.0211639088627833 1.1113395633340668 1.0628433039153005 1.0687479407460092 1.0 22.042591961406178 -4.783721191954046 24.99866067850536 1.0663954137883382 1.0363136719552908 0.07723025362169078 0.034739922965055556 426.8554071666048 478902.2948536233 0.008343090003138503 0.01738764783401047 1.6454277146672452e-05 4.783721191954046 -0.03008174183304746 RFS(ph)EDSSTSK ddPTM_KYSE-520_SHP099_60min_R1 3 RFSEDSSTSK 10 1 Q14207 Q14207 NPAT Protein NPAT 1 RFS(0.999)EDS(0.001)STSK;RFS(0.998)EDS(0.002)STSK;RFS(0.998)EDS(0.002)STSK 143.97 0.00013731 1439240000.0 2296640.0 2613350.0 2612290.0 2685940.0 2652860.0 2822070.0 3501000.0 3987800.0 4337900.0 3303300.0 True False 2169240.8009616625 2487800.74328168 2780682.3932117797 2941210.930042689 2861624.989291355 2804456.414336287 3854915.2464673105 3973967.25255952 3550246.709560097 3274035.331928509 0.6625587634339646 0.7598576347116841 0.8493134958240879 0.8983442852188844 0.8740360744994675 0.8565748777928962 1.1774201728594802 1.213782641196706 1.0843642018575563 1.0 21.642638460141434 -6.713235166503666 5.6716979762798525 1.1369267396837754 0.8193842406986787 0.7621466074599839 0.08253630165550964 0.09418583898501404 6.813708153569056 0.03437850869531183 0.0259283800960728 1.935373692942447e-07 6.713235166503666 -0.3175424989850968 RFS(ph)EGTSADR ddPTM_KYSE-520_SHP099_60min_R1 1 RFSEGTSADR 10 1 P62333;A0A087X2I1;H0YJX2 P62333 PSMC6 26S protease regulatory subunit 10B 1 RFS(1)EGTSADR 86.756 0.0027182 18407000.0 15007.0 12118.0 17476.0 14409.0 14919.0 12336.0 12788.0 12328.0 17612.0 12743.0 True False 14174.531794287184 11535.833090511165 18602.530922588652 15778.427027776177 16093.040422501672 12259.006448193148 14080.735838852905 12285.237045376836 14414.104762390207 12630.106933903977 1.1222812180819617 0.9133598908449961 1.4728720049592323 1.249271056084325 1.274180852681609 0.970617787509411 1.1148548395148494 0.9726946184753686 1.141249621861657 1.0 13.62457923343025 -6.260305600109294 24.998025480156084 1.04286250318438 1.207299890757448 0.25990653736314473 0.14044039589385096 160.65076413469407 3542117.2059376496 0.049687804765996414 0.04700076136355295 5.491543143113704e-07 6.260305600109294 0.16443738757306803 RFS(ph)EGVLQSPSQDQEK ddPTM_KYSE-520_SHP099_60min_R1 11 RFSEGVLQSPSQDQEK 16 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RFS(1)EGVLQSPSQDQEK;RFS(0.97)EGVLQS(0.029)PSQDQEK;RFS(1)EGVLQSPSQDQEK;RFS(0.681)EGVLQS(0.136)PS(0.182)QDQEK;RFS(1)EGVLQSPSQDQEK;RFS(1)EGVLQSPSQDQEK;RFS(1)EGVLQSPSQDQEK;RFS(1)EGVLQSPSQDQEK;RFS(1)EGVLQSPSQDQEK;RFS(1)EGVLQSPSQDQEK;RFS(0.978)EGVLQS(0.022)PS(0.001)QDQEK 283.64 2.0214e-37 37934150000.0 19371830.0 16953630.0 14242770.0 11840700.0 11882900.0 12371130.0 11795020.0 11781390.0 13532770.0 14527910.0 True False 18297235.97311431 16139152.166882548 15160881.743437745 12966036.567963738 12818016.625547614 12293917.188832344 12987375.729901986 11740523.107887108 11075560.101370156 14399204.019942943 1.2707116273769425 1.1208364118273324 1.052897210320784 0.9004689807857251 0.8901892498914954 0.8537914437357252 0.9019509489492912 0.8153591748284451 0.7691786355711379 1.0 23.779485726697136 -4.649618872251382 0.8820538445522121 0.8542021471455433 1.3661490620533672 0.8375626962988889 0.05881835363060451 0.47901358919541337 0.4345259306659348 0.021369808430880835 0.21218663477727243 2.2406866557109108e-05 4.649618872251382 0.5119469149078238 RFS(ph)FCCSPEPEAEAEAAAGPGPCER ddPTM_KYSE-520_SHP099_60min_R1 8 RFSFCCSPEPEAEAEAAAGPGPCER 25 1 E7EMC7;Q13501;E3W990;D6RBF1;C9J6J8 E7EMC7 SQSTM1 Sequestosome-1 1 RFS(0.784)FCCS(0.216)PEPEAEAEAAAGPGPCER;RFS(0.989)FCCS(0.011)PEPEAEAEAAAGPGPCER;RFS(1)FCCSPEPEAEAEAAAGPGPCER;RFS(0.9)FCCS(0.1)PEPEAEAEAAAGPGPCER;RFS(0.93)FCCS(0.07)PEPEAEAEAAAGPGPCER;RFS(0.984)FCCS(0.016)PEPEAEAEAAAGPGPCER;RFS(0.999)FCCS(0.001)PEPEAEAEAAAGPGPCER;RFS(0.877)FCCS(0.123)PEPEAEAEAAAGPGPCER 224.58 1.0167e-21 23651100000.0 3166120.0 3558170.0 3108260.0 2671670.0 2604780.0 3283200.0 2621480.0 2932650.0 3603330.0 3471220.0 True False 2990489.012096255 3387230.1722779456 3308623.412991839 2925584.7135331263 2809761.3668291355 3262708.330958797 2886484.7815793003 2922477.3216356533 2949056.1045573154 3440467.6913682963 0.8692100261830734 0.9845260807930512 0.9616783849744504 0.8503450623509858 0.8166800618062701 0.9483327918307516 0.8389803481721774 0.8494418735475365 0.8571672136192788 1.0 21.714173265110382 -5.259766939271075 24.97209363252417 0.8723448798304233 0.9430769576907821 0.1596691127818508 0.05919546080512123 214.23922921346485 3198894.907080556 0.015625989535365457 0.02532407118714642 5.498358598031496e-06 5.259766939271075 0.07073207786035884 RFS(ph)FSQR ddPTM_KYSE-520_SHP099_60min_R1 4 RFSFSQR 7 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RFS(0.656)FS(0.344)QR;RFS(0.999)FS(0.001)QR;RFS(0.947)FS(0.053)QR;RFS(0.579)FS(0.421)QR 106.88 0.0023691999999999997 8739600000.0 11292920.0 11494940.0 11128860.0 11013500.0 11530840.0 9860500.0 10164780.0 11120170.0 13370800.0 11087480.0 True False 10666479.215722091 10942705.828143286 11846244.122405564 12060219.72867049 12438251.506495025 9798956.961933253 11192335.161092838 11081596.725737188 10942999.77043874 10989253.553128902 0.9706281836299147 0.995764250523425 1.0779844204279605 1.0974557708004344 1.1318559032568285 0.8916854010655945 1.018480018409086 1.0084030432241682 0.9957909986818902 1.0 23.389590058526657 -6.252649579938016 24.983716139806386 0.9856225888670305 1.0551261066003246 0.3031007200760981 0.054404377279637844 943.3312028767897 2681283.0284757884 0.019443794272020396 0.01917527716763763 5.589209905487522e-07 6.252649579938016 0.0695035177332941 RFS(ph)LDER ddPTM_KYSE-520_SHP099_60min_R1 4 RFSLDER 7 1 Q7LBC6;Q7LBC6-2 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 RFS(1)LDER;RFS(1)LDER;RFS(1)LDER;RFS(1)LDER 131.82 0.0012855 1244310000.0 1300377.0 1227362.0 1359540.0 1355488.0 1436598.0 1772204.0 1869688.0 2233550.0 2660870.0 1913984.0 True False 1228242.4955727193 1168397.6872120788 1447178.123740913 1484313.1719776727 1549650.0894755053 1761143.0174703046 2058694.3094364384 2225802.3363644877 2177723.083074111 1897027.5908170196 0.6474563161433697 0.6159096962363465 0.7628661442491917 0.7824415307203849 0.8168832635734601 0.9283697432739016 1.0852210686876682 1.1733104711491678 1.1479659513735383 1.0 20.855309231123336 -6.223889209944897 0.9232362098150889 1.135139129080228 0.6626038701467751 0.9014484741949771 0.05998926782811916 0.16070957569848165 0.2942135638113931 0.03693850834901238 0.03533238889210863 5.971876118211072e-07 6.223889209944897 -0.47253525893345283 RFS(ph)LDTDYR ddPTM_KYSE-520_SHP099_60min_R1 4 RFSLDTDYR 9 1 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 RFS(1)LDTDYR;RFS(1)LDTDYR;RFS(1)LDTDYR;RFS(1)LDTDYR 140.31 0.00027146 1499840000.0 2551270.0 2179310.0 2253380.0 1889300.0 1827790.0 1953500.0 1870100.0 1916620.0 2244380.0 2280820.0 True False 2409745.9672693457 2074612.676388999 2398636.480335476 2068858.5039612448 1971626.6742974932 1941307.4818859703 2059147.9584171742 1909971.6925624697 1836857.1682156099 2260613.709251109 1.0659698105023174 0.917721001115344 1.061055442829324 0.9151755983319289 0.8721643446772909 0.858752414860424 0.9108800632281948 0.8448907855182392 0.8125480088431914 1.0 21.10828305661026 -5.453837223550202 4.9063563633837495 0.8767317808794444 1.0046371808123262 0.4839589475229068 0.06035606717782685 0.1788805672674521 8.212112164547634 0.01638350349988625 0.024246578188290357 3.51692232407819e-06 5.453837223550202 0.12790539993288186 RFS(ph)LS(ph)PSLGPQASR ddPTM_KYSE-520_SHP099_60min_R1 8 RFSLSPSLGPQASR 14 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 2 RFS(1)LS(1)PSLGPQASR;RFS(1)LS(0.959)PS(0.041)LGPQASR;RFS(0.657)LS(0.734)PS(0.609)LGPQASR;RFS(1)LS(0.985)PS(0.015)LGPQASR;RFS(0.998)LS(0.501)PS(0.501)LGPQASR;RFS(1)LS(0.872)PS(0.128)LGPQASR;RFS(0.999)LS(0.877)PS(0.124)LGPQASR;RFS(1)LS(0.903)PS(0.097)LGPQASR 132.87 0.00019341 6276360000.0 4825530.0 4522870.0 4561200.0 4144230.0 4332530.0 4263270.0 4078420.0 4432150.0 5330330.0 4184210.0 True False 4557848.231444434 4305584.536233723 4855222.25017803 4538096.373191821 4673475.462276374 4236661.350550291 4490706.495143446 4416775.90612159 4362476.438684494 4147141.154666116 1.099033782902763 1.038205446995537 1.1707395695261598 1.0942710180206492 1.1269149729851993 1.0215860016685114 1.0828438984023419 1.0650170180853615 1.0519237894220446 1.0 21.98368572186612 -6.256746941480527 24.994698472125865 1.0507483148720287 1.105039467211984 0.3968580462692405 0.03751638695211675 465.3229373790392 2478587.0678729624 0.012467860884260835 0.01206398200234854 5.536726340694773e-07 6.256746941480527 0.054291152339955406 RFS(ph)LSPS(ph)LGPQASR ddPTM_KYSE-520_SHP099_60min_R1 3 RFSLSPSLGPQASR 14 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 2 RFS(0.973)LS(0.084)PS(0.943)LGPQASR;RFS(0.99)LS(0.049)PS(0.961)LGPQASR;RFS(0.662)LS(0.518)PS(0.82)LGPQASR 136.7 7.9207e-06 2804190000.0 3160970.0 3358760.0 2905000.0 2763460.0 3112870.0 2626980.0 2770000.0 2775490.0 3853240.0 2721280.0 True False 2985624.6928625233 3197400.1279984578 3092260.948164344 3026098.4075354575 3357835.159192487 2610584.0433912445 3050018.6325948215 2765862.4729942377 3153588.7482757424 2697171.5763238003 1.1069465209669307 1.1854641195486944 1.1464828471828417 1.1219525053945507 1.2449468134204351 0.9678969133099893 1.13082113847275 1.0254677519492705 1.1692206665524894 1.0 21.36301586859073 -6.257218025339673 24.99897548764381 1.0647817702626319 1.1595154343676957 0.37887265379540014 0.06535579861396608 421.4274919202975 2495707.190755304 0.020580203150680442 0.01986803297993815 5.530723850618242e-07 6.257218025339673 0.09473366410506379 RFS(ph)LSVPR ddPTM_KYSE-520_SHP099_60min_R1 4 RFSLSVPR 8 1 Q07002;D6R9B0;A0A0A0MSJ6;Q07002-3;D6R9X1 Q07002 CDK18 Cyclin-dependent kinase 18 1 RFS(0.886)LS(0.114)VPR;RFS(0.89)LS(0.11)VPR;RFS(0.755)LS(0.245)VPR;RFS(1)LSVPR 141.91 0.00038376 1182954000.0 1374690.0 1152610.0 1052170.0 1009180.0 1079280.0 1044130.0 1051220.0 1105650.0 1363800.0 1218040.0 True False 1298433.2053234265 1097236.8854971188 1119994.561731523 1105092.163778969 1164213.1957368194 1037613.1973696428 1157487.5765185286 1101814.75821065 1116168.2986002583 1207249.1132207797 1.0755304693157983 0.9088736313666341 0.9277244849188804 0.9153803897446903 0.9643520819252075 0.8594855742750799 0.9587810534236021 0.9126656181764798 0.9245550784646841 1.0 20.2032919731102 -4.2572067661341615 24.67113808986032 0.9266825903023787 1.0755305404131148 0.5926746555193744 0.03603771781767785 223.9117438988859 1305080.8306466658 0.008144651611646894 0.06157317891083312 5.5308672380345445e-05 4.2572067661341615 0.14884795011073615 RFS(ph)MEDVSK ddPTM_KYSE-520_SHP099_60min_R1 2 RFSMEDVSK 9 1 Q07002 Q07002 CDK18 Cyclin-dependent kinase 18 1 RFS(1)MEDVSK;RFS(0.663)MEDVS(0.337)K 85.837 0.0031533 3442500000.0 3799500.0 3242300.0 2520870.0 2670930.0 2944300.0 2699300.0 2827460.0 3101440.0 3474300.0 3101920.0 True False 3588734.16088453 3086535.0412084777 2683369.3137346115 2924774.3841556134 3175999.6592245903 2682452.6674455046 3113287.250150381 3090681.828521535 2843454.6999757136 3074439.4020572444 1.167280824752359 1.003934258435258 0.8727995458095709 0.9513195746185521 1.0330337482337064 0.8725013951000484 1.0126357501361523 1.00528305305137 0.9248693267699573 1.0 21.5518919405553 -4.303806062056004 3.7102108533401252 0.9594231424144191 1.1811536048603686 0.574270078261619 0.05352049321963114 0.16178994347001008 4.078098014255913 0.013303097557337702 0.09090031327373199 4.968141285527662e-05 4.303806062056004 0.22173046244594952 RFS(ph)MEGISNILQSGIR ddPTM_KYSE-520_SHP099_60min_R1 3 RFSMEGISNILQSGIR 16 1 Q99689 Q99689 FEZ1 Fasciculation and elongation protein zeta-1 1 RFS(1)MEGISNILQSGIR;RFS(1)MEGISNILQSGIR;RFS(1)MEGISNILQSGIR 217.82 3.9764999999999996e-18 531886000.0 197553.0 249219.0 242622.0 231412.0 251454.0 226409.0 204422.0 221486.0 241389.0 197057.0 True False 186594.34127785813 237246.1451546547 258261.8023289258 253405.32690344495 271241.9992224503 224995.89744884556 225086.97072646112 220717.7167612209 197558.84252149737 195311.22828802635 0.9553692479097341 1.2147081723575397 1.322309037696829 1.2974437216161836 1.3887680785174752 1.151986495712592 1.1524527939301286 1.1300820679686039 1.0115078598049492 1.0 17.57541536544242 -7.375527362827474 1.203519583867403 0.9994964983903475 1.2369014988220548 0.36097411080462993 0.11049019830317117 0.5453662537868126 1.3871869376786317 0.103654821463463 0.037823098142613316 4.211847490724407e-08 7.375527362827474 0.2374050004317073 RFS(ph)PPRR ddPTM_KYSE-520_SHP099_60min_R1 2 RFSPPRR 7 2 H3BMM9;H3BTC0;Q15287;H3BV80;H3BPG5;Q15287-2;Q15287-3 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 RFS(1)PPRR;RFS(1)PPRR 57.108000000000004 0.040043 52584660000.0 537360.0 465260.0 326660.0 532550.0 401810.0 502610.0 417210.0 545130.0 392420.0 328190.0 True False 507551.5695993975 442908.2112305023 347717.0262744794 583163.3918830047 433430.1610138346 499473.02455628663 459385.65837721457 543239.0712642986 321166.4201031775 325282.491927956 1.5603408796800864 1.3616109757564148 1.068969387849784 1.7927905938822077 1.3324730711600403 1.5355054051507653 1.4122667828029303 1.6700532144982951 0.9873461624067669 1.0 18.311333646989638 -9.74064162268243 6.616469543792669 1.0000000059849172 1.4216982014901451 0.2159973618551826 0.2358608717151783 6.24457357417879e-09 1.4515489403382832e-09 0.2148407387138292 0.05210653284722612 1.81701443419727e-10 9.74064162268243 0.4216981955052279 RFS(ph)PSQVPIQTR ddPTM_KYSE-520_SHP099_60min_R1 2 RFSPSQVPIQTR 12 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 RFS(0.997)PS(0.003)QVPIQTR;RFS(0.988)PS(0.012)QVPIQTR 75.535 0.010712000000000001 1326430000.0 994740.0 1044020.0 938770.0 831430.0 914240.0 1025010.0 960010.0 1026850.0 1167750.0 1105910.0 True False 939559.7892349729 993863.7120940315 999284.6162851074 910448.8572214558 986185.4866859647 1018612.5323818462 1057057.1795947114 1023288.0970185929 955716.0365819421 1096112.4977849594 0.8571745976199062 0.9067168872742956 0.9116624601074039 0.8306162543181512 0.8997119261744239 0.9292956101132628 0.9643692428750046 0.9335611984047886 0.8719141862840424 1.0 20.06396444396156 -6.18969726443976 3.5931025569681143 0.9376543025520866 0.8799282226557018 0.39228452663310565 0.037095281963507205 0.28279912791413236 7.149389836612317 0.012865112998960692 0.012630644552803208 6.461044549635536e-07 6.18969726443976 -0.057726079896384785 RFS(ph)RS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 2 RFSRSPIR 8 2 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2;H7C2G8 P18583-10 SON Protein SON 2 RFS(1)RS(1)PIR;RFS(1)RS(1)PIR 74.392 0.013875 22281700000.0 5857300.0 5339400.0 5395000.0 5264400.0 5768400.0 5248300.0 5246000.0 5917100.0 6457400.0 5187500.0 True False 5532383.892761934 5082887.20939721 5742770.3323051995 5764726.993200419 6222340.26229362 5215543.412941959 5776316.876026138 5896574.961161525 5284898.937807085 5141542.785813925 1.076016309351034 0.9885918334515172 1.1169352413345905 1.121205683458655 1.210208787810097 1.0143926891617454 1.1234598478813838 1.1468493420750705 1.027881933101616 1.0 22.29376989284336 -4.777230055493963 24.995969349244483 1.1035327553585945 1.0323040597826993 0.11945827176404333 0.06508049457753054 362.55940294998373 573917.0755941424 0.016396787912327935 0.03431647220837866 1.670205634679268e-05 4.777230055493963 -0.07122869557589517 RFS(ph)SEDLEDPLR ddPTM_KYSE-520_SHP099_60min_R1 1 RFSSEDLEDPLR 12 1 A0A0R4J2E4;K7ENL6;Q8TES7-4;Q8TES7-3;Q8TES7-2;Q8TES7-5;Q8TES7;Q8TES7-6 A0A0R4J2E4 FBF1 Fas-binding factor 1 1 RFS(0.752)S(0.248)EDLEDPLR 79.837 0.0068484999999999996 96798000.0 344730.0 334030.0 312790.0 282520.0 365630.0 351690.0 315150.0 329980.0 396420.0 349710.0 True False 325607.13969778223 317982.697410748 332952.943881695 309370.6158572646 394403.0008498748 349494.97225721803 347008.4375676019 328835.3763979108 324440.1209349718 346611.8414702629 0.9393999302407482 0.9174028678937355 0.9605931016937291 0.8925563954911986 1.1378809194079773 1.0083180389184785 1.001144208159931 0.9487136244481792 0.9360329974843248 1.0 18.402961417274778 RFS(ph)SEITHK ddPTM_KYSE-520_SHP099_60min_R1 2 RFSSEITHK 9 1 Q8IWV8-3;Q8IWV8-4;Q8IWV8 Q8IWV8-3 UBR2 E3 ubiquitin-protein ligase UBR2 1 RFS(0.946)S(0.054)EITHK;RFS(0.932)S(0.068)EITHK 123.28 0.00045939 591000000.0 500320.0 531140.0 442040.0 471590.0 577280.0 561950.0 503230.0 515060.0 566680.0 541040.0 True False 472566.2522368064 505623.2371426062 470534.60568900645 516409.77181129664 622708.6517261053 558442.661605232 554101.3994515121 513273.3770759082 463785.1968402957 536246.8065227505 0.8812476764218409 0.9428927706279121 0.8774590355887626 0.9630076403809553 1.1612351703574884 1.0413911184411684 1.0332954764701319 0.9571588507989228 0.8648726504269063 1.0 19.032537625482544 -5.521693101744909 24.99569841868072 1.0149976348706482 0.9073464760586448 0.31483850152146586 0.07166767347577584 56.56004750397746 1192415.573379043 0.022729056352660825 0.029734509282314036 3.008201325291126e-06 5.521693101744909 -0.10765115881200338 RFS(ph)SSDFSDLSNGEELQETCSSSLR ddPTM_KYSE-520_SHP099_60min_R1 1 RFSSSDFSDLSNGEELQETCSSSLR 25 1 P23497;P23497-3;P23497-4;P23497-2;E9PHV6;P23497-7;P23497-6;H7C4B4;H7C1G8 P23497 SP100 Nuclear autoantigen Sp-100 1 RFS(0.665)S(0.223)S(0.075)DFS(0.038)DLSNGEELQETCSSSLR 172.36 1.3318e-10 635140000.0 127910.0 99598.0 109990.0 99713.0 89195.0 79158.0 58517.0 80493.0 83526.0 63702.0 True False 120814.57731773665 94813.16258035421 117080.1313902224 109189.69354019329 96214.13904987162 78663.94555983083 64432.46943088481 80213.78857020749 68359.78391911225 63137.64983940608 1.913510839016575 1.5016897654809207 1.8543631523824826 1.7293911607087529 1.5238790055473608 1.2459118411901091 1.0205078838818387 1.2704588906022865 1.0827103019036808 1.0 15.946212940039807 -6.170865482712537 1.9597634628946061 1.1137313721375572 1.741671119586806 0.8554244803890623 0.123062547706398 0.12067611747987061 0.9133970098263405 0.04629742674664236 0.04520149727702467 6.747369866830296e-07 6.170865482712537 0.6279397474492487 RFS(ph)TEEFVLL ddPTM_KYSE-520_SHP099_60min_R1 1 RFSTEEFVLL 10 1 Q96DT6 Q96DT6 ATG4C Cysteine protease ATG4C 1 RFS(0.561)T(0.439)EEFVLL 65.5 0.040208 19111000.0 56339.0 62129.0 64875.0 68621.0 65454.0 69972.0 64074.0 69377.0 85394.0 62595.0 True False 53213.76336098791 59144.22958246978 69056.94630367012 75142.71920834412 70604.85741768376 69535.2787932044 70551.22522197837 69136.34737971361 69888.60220756014 62040.45699817306 0.8577268114345922 0.9533171166713268 1.1130953839637847 1.2111890022112004 1.1380454115572183 1.120805393088127 1.1371809402380115 1.1143752113519974 1.1265004416330813 1.0 15.920921693044177 -4.646561249843094 2.8884835291555406 1.1301185308239088 0.8698682378469481 0.760343641084482 0.0493765103025944 0.11260076957908492 1.794963185863843 0.01265013737147726 0.045443404764485856 2.25651772964473e-05 4.646561249843094 -0.2602502929769607 RFS(ph)VSPSSPSSQQTPPPVTPR ddPTM_KYSE-520_SHP099_60min_R1 1 RFSVSPSSPSSQQTPPPVTPR 21 1 A0A096LNH6;Q14185 A0A096LNH6 DOCK1 Dedicator of cytokinesis protein 1 1 RFS(0.491)VS(0.094)PS(0.196)S(0.196)PS(0.017)S(0.005)QQT(0.001)PPPVTPR 46.695 0.052133000000000006 0.0 109390.0 152440.0 149460.0 129820.0 112360.0 75086.0 94569.0 86469.0 112430.0 89300.0 True False 103321.9186364412 145116.55358289517 159094.4307444553 142158.05376819387 121202.09275905123 74617.36042226241 104128.95742449796 86169.05922101627 92015.54612965755 88508.87147434874 1.1673622871396063 1.6395707138233282 1.7974969976943316 1.6061446880993564 1.3693779023516022 0.8430495065558224 1.1764804554611925 0.9735640934704429 1.039619470872195 1.0 16.43353444706821 -6.0512336899852395 4.082093448113679 1.0173450253449887 1.571202748589686 0.7046467963442172 0.1677146923696616 0.12578505613549068 4.340531876759894 0.05742065337215622 0.059610798813495416 8.887227753787606e-07 6.0512336899852395 0.5538577232446973 RFSDIQIR ddPTM_KYSE-520_SHP099_60min_R1 1 RFSDIQIR 8 1 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586;A0A494C1T2 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 0 108.3 0.037339 0.0 86930.0 57841.0 66013.0 41253.0 74905.0 77100.0 58929.0 74645.0 61521.0 56767.0 False True 82107.81960934126 55062.231538888955 70268.30360453454 45173.67271683328 80799.59734884955 76618.7903012072 64886.118411617324 74386.07391727404 50350.3372182039 56264.0885440577 1.459329062889672 0.9786390033808576 1.248901482683947 0.8028864216197149 1.436077601889512 1.3617707543811133 1.153242149489512 1.3220879577392584 0.8948929685189333 1.0 15.779926772371228 -7.769630695826366 24.988586160050556 0.9474463558791697 1.209010693399639 0.23785078893399836 0.1945697943609579 297.80350595311626 908449.1033805405 0.17253170330580134 0.047606038382139455 1.6996883754046894e-08 7.769630695826366 0.26156433752046926 RFSEDS(ph)STSK ddPTM_KYSE-520_SHP099_60min_R1 3 RFSEDSSTSK 10 1 Q14207 Q14207 NPAT Protein NPAT 1 RFS(0.17)EDS(0.684)S(0.07)T(0.07)S(0.006)K;RFS(0.173)EDS(0.514)S(0.149)T(0.149)S(0.015)K;RFS(0.083)EDS(0.774)S(0.128)T(0.011)S(0.004)K 189.56 3.5587e-06 2781970000.0 4444160.0 4760190.0 4895300.0 5127100.0 5158350.0 5373600.0 6865300.0 7513900.0 8844800.0 6456100.0 True False 4197633.585586676 4531503.327209145 5210858.870756932 5614378.042481177 5564282.798003314 5340061.369164286 7559311.522871196 7487836.034657447 7238807.2792635 6398903.9767697975 0.6559925888598293 0.7081686713318478 0.8143361565783962 0.8773968265289309 0.8695681038820956 0.8345275047962165 1.1813447350224466 1.170174777093209 1.1312573693155636 1.0 22.609393386516526 -6.2297576032278235 0.8147230691215085 1.1419097326403167 0.7177219214115508 0.762941677535659 0.08697928581590166 0.3055051877642248 0.44218810914396084 0.06016659213036867 0.05915148839937191 5.891724038140666e-07 6.2297576032278235 -0.4241878112287659 RFSEDSS(ph)TSK ddPTM_KYSE-520_SHP099_60min_R1 1 RFSEDSSTSK 10 1 Q14207 Q14207 NPAT Protein NPAT 1 RFS(0.007)EDS(0.122)S(0.419)T(0.031)S(0.419)K 205.31 4.786500000000001e-07 1431600000.0 2613300.0 2802200.0 2627000.0 2654500.0 2793300.0 3154800.0 3804100.0 4523500.0 4949700.0 3636200.0 True False 2468335.039515606 2667578.1058120485 2796340.6233486147 2906782.881895471 3013116.818297062 3135109.7229863564 4188655.5524382535 4507809.034292835 4050959.2517830343 3603986.0969207883 0.6848902779132606 0.7401743608531681 0.7759021672524713 0.8065466413366574 0.836051177020755 0.8699006152285006 1.1622285546597977 1.2507842464054633 1.1240218865561484 1.0 21.78116201500889 -6.644768847755622 2.814913804201101 1.1591017691856802 0.7720241309993038 0.8547257441047377 0.07096633227823103 0.09359446505370411 1.4978578620247314 0.03112952048422878 0.022748868575842098 2.2658499801743075e-07 6.644768847755622 -0.3870776381863764 RFSEGVLQS(ph)PSQDQEK ddPTM_KYSE-520_SHP099_60min_R1 2 RFSEGVLQSPSQDQEK 16 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RFSEGVLQS(1)PSQDQEK;RFSEGVLQS(1)PSQDQEK 140.17 1.0955e-05 853090000.0 775580.0 730400.0 750370.0 545610.0 754250.0 700140.0 476950.0 633590.0 853660.0 683870.0 True False 732557.0313196002 695310.4876472488 798740.0508344491 597464.6103563714 813605.1839045435 695770.1665562536 525164.7605834287 631392.224171018 698656.8630173753 677811.443842809 1.0807681663891873 1.0258169789893634 1.1784103943510353 0.8814613795380669 1.2003414685533496 1.0264951600870424 0.7747947683002229 0.9315160283977796 1.030754008897201 1.0 19.37052446923437 -6.53742555577978 24.976561596731433 0.9245714238796834 1.0706460412028658 0.28796841569635523 0.10285061189749446 285.5495253445788 490278.2512861141 0.03783861696450341 0.02932041856968614 2.901178459117808e-07 6.53742555577978 0.1460746173231824 RFSFS(ph)QR ddPTM_KYSE-520_SHP099_60min_R1 2 RFSFSQR 7 1 Q92614;A0A0D9SFK2;Q92614-3;Q92614-4 Q92614 MYO18A Unconventional myosin-XVIIIa 1 RFS(0.256)FS(0.744)QR;RFS(0.39)FS(0.61)QR 104.48 0.004419 1102100000.0 2232630.0 2213610.0 2178720.0 2103930.0 2146440.0 2000190.0 1914110.0 2116910.0 2543310.0 2148760.0 True False 2108781.563262434 2107264.8529036487 2319163.7772752563 2303886.874630379 2315352.616427005 1987706.0722771925 2107606.918713382 2109566.933300509 2081509.015627676 2129723.6581099816 0.9901667548426765 0.9894545918571127 1.0889505633483891 1.0817773779509772 1.0871610537874943 0.9333164256818078 0.9896152069718627 0.9905355210133879 0.9773610804863324 1.0 21.022234815297196 -6.258313603963382 24.992322753404263 0.9782897147545775 1.0484840859619098 0.46360383532810623 0.03728311249339527 286.50281292455134 2290759.4928317126 0.013859724572680298 0.013288936244492148 5.51678928165809e-07 6.258313603963382 0.0701943712073323 RFSMEDVS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 RFSMEDVSK 9 1 Q07002 Q07002 CDK18 Cyclin-dependent kinase 18 1 RFS(0.061)MEDVS(0.939)K 111.33 0.00097696 1622200000.0 2429600.0 1983300.0 1423000.0 1649900.0 1669400.0 1827400.0 1661000.0 1776800.0 2005100.0 1675200.0 True False 2294825.2447124734 1888019.291006006 1514728.8568805016 1806705.9999394752 1800772.2824133167 1815994.5187603883 1828910.08979783 1770636.6955082386 1641024.3844576743 1660359.03128588 1.3821259146193372 1.137115078986147 0.9122899495462775 1.0881417608456982 1.084568005161325 1.093736044157856 1.101514826212867 1.0664179627083146 0.9883551409882526 1.0 20.663063808877798 -4.325483598364407 3.515330950696609 1.0502423235342722 1.401617188209672 0.7539472063111685 0.05829150661580525 0.12089214855538158 2.535832620323468 0.01499057352655557 0.09991522792541502 4.726246857815623e-05 4.325483598364407 0.3513748646753998 RFST(ph)EEFVLL ddPTM_KYSE-520_SHP099_60min_R1 1 RFSTEEFVLL 10 1 Q96DT6 Q96DT6 ATG4C Cysteine protease ATG4C 1 RFS(0.451)T(0.549)EEFVLL 57.802 0.055499 79601000.0 228460.0 258760.0 319760.0 351150.0 268350.0 270430.0 245200.0 274910.0 396410.0 219720.0 True False 215786.86837628094 246328.78119332134 340372.2412340893 384523.1904229033 289467.61829736026 268742.1460590849 269987.20892138977 273956.40137447667 324431.9366828924 217773.45173957344 0.9908777523273673 1.1311240154649156 1.5629648082224772 1.765702785859955 1.3292144473309033 1.2340445720650233 1.239761811023029 1.257988056790734 1.4897680782084841 1.0 17.73246856357812 -6.003474056935891 24.982304638877025 1.2625386691349216 1.3838133306397704 0.052345386808891226 0.2276172732199734 523.2213742801018 3762586.8001457434 0.07754240091271433 0.08618023805878136 9.920325976401686e-07 6.003474056935891 0.12127466150484878 RFT(ph)PPSTALS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 5 RFTPPSTALSPGK 13 1 A8MZI9;Q01196-7;Q01196-3;Q01196-4;Q01196;Q01196-9;Q01196-10;Q01196-2;Q01196-8;C9JWM1;H9KVB1;Q01196-6;Q01196-5 A8MZI9 RUNX1 Runt-related transcription factor 1 2 RFT(0.972)PPS(0.028)T(0.002)ALS(0.998)PGK;RFT(0.983)PPS(0.017)T(0.001)ALS(0.999)PGK;RFT(0.997)PPS(0.007)T(0.012)ALS(0.985)PGK;RFT(0.986)PPS(0.115)T(0.015)ALS(0.883)PGK;RFT(0.998)PPS(0.002)TALS(1)PGK 101.62 0.0011003 4725970000.0 4719020.0 4227590.0 3761520.0 3906830.0 4192060.0 3979320.0 3950070.0 4064300.0 4930360.0 3938940.0 True False 4457246.5534668565 4024490.2306580404 4003993.5978447995 4278133.948568727 4521951.2724413425 3954483.5878261947 4349381.624568166 4050201.8919147514 4035130.9082613094 3904044.0560489506 1.1416998603181157 1.0308516432908768 1.025601540443937 1.0958211247488765 1.158273627941007 1.0129198162349353 1.114070835811703 1.0374375477754516 1.0335771959359044 1.0 21.89653790272823 -7.718958996831297 1.6066119178893472 1.0033090928576918 1.0795478290320506 0.25284166404722186 0.04682332521408508 0.5436665874907705 2.7026474312540225 0.04373828236958875 0.013331252589632735 1.9100335825986445e-08 7.718958996831297 0.07623873617435883 RFTPPSTALS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 2 RFTPPSTALSPGK 13 1 A8MZI9;Q01196-7;Q01196-3;Q01196-4;Q01196;Q01196-9;Q01196-10;Q01196-2;Q01196-8;C9JWM1;H9KVB1;Q01196-6;Q01196-5 A8MZI9 RUNX1 Runt-related transcription factor 1 1 RFTPPSTALS(1)PGK;RFTPPSTALS(1)PGK 189.11 2.7458e-08 1251440000.0 1436220.0 1417910.0 1287680.0 1053170.0 1208650.0 1251720.0 1161680.0 1134730.0 1467650.0 1248500.0 True False 1356550.013566412 1349791.4752737007 1370685.9131608452 1153262.960152893 1303763.87872221 1243907.5511780407 1279113.9513042409 1130793.8864779724 1201161.756445718 1237439.261318302 1.09625583733396 1.09079412417843 1.1076793471871818 0.9319754077660894 1.053598281125531 1.005227157454862 1.0336781701443196 0.9138176893412002 0.9706834056372707 1.0 20.238926282762563 -4.947624322356616 0.5693423315495821 0.9731917659629425 1.1488517125383537 0.4802335074389935 0.04666845309308998 1.7511450047746713 0.7319418403852662 0.02906433165182234 0.18529589389571485 1.1281729373488485e-05 4.947624322356616 0.17565994657541117 RGAAGDWGER ddPTM_KYSE-520_SHP099_60min_R1 5 RGAAGDWGER 10 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 0 ;;;; 158.56 0.00020232 4119010000.0 1804080.0 1645750.0 1138470.0 913190.0 1483190.0 1630910.0 1086340.0 1326870.0 1459770.0 1413290.0 False True 1704004.0860556827 1566685.6996788892 1211857.5978164056 999979.3030394155 1599908.6148032856 1620730.8857346543 1196157.8488566978 1322267.3976637851 1194712.5658070834 1400769.3501229805 1.216477277937356 1.1184465876136869 0.8651371460333641 0.7138786288774968 1.1421642075926501 1.1570290894731257 0.8539291988018449 0.9439579739146182 0.852897420765377 1.0 20.417787991311265 -4.597658613684523 4.847135216327977 0.9434227612800495 1.1954411941960639 0.3431836392136156 0.12816237426992672 0.22251063276980507 9.403156790360907 0.035360256104419494 0.10248909419189213 2.525465187481667e-05 4.597658613684523 0.25201843291601433 RGADDDRPSWR ddPTM_KYSE-520_SHP099_60min_R1 2 RGADDDRPSWR 11 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ; 173.76 6.3078e-06 6207400000.0 689220.0 744870.0 639410.0 537910.0 691190.0 709190.0 452940.0 499050.0 868100.0 420980.0 False True 650987.5926739933 709085.327127336 680627.3916921724 589032.8046714619 745582.720666862 704763.6821493264 498727.59546841076 497318.91202914616 710474.9230201538 417250.4447174844 1.560184299179764 1.6994237779841066 1.6312202906171078 1.4117008432915858 1.7868949694509917 1.6890663415026772 1.1952715731821295 1.1918954630854264 1.7027541420625887 1.0 18.670554061691234 -9.795141115506214 0.18609053201872114 0.5733835106951556 1.7423232162284847 0.445291379514693 0.19186455410216424 17.370373740740835 0.7773681337124169 4.671042565557215 0.7662371032088323 1.6027245320521536e-10 9.795141115506214 1.168939705533329 RGAEDDRGPWR ddPTM_KYSE-520_SHP099_60min_R1 4 RGAEDDRGPWR 11 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;;; 151.26 3.445e-05 9429300000.0 1377190.0 1571340.0 1423160.0 653740.0 1015790.0 1195600.0 708740.0 750140.0 1125530.0 856750.0 False True 1300794.5253397992 1495850.4677705748 1514899.170736511 715871.2530459022 1095726.8939455026 1188137.8169146986 780386.3558358315 747537.9394239924 921162.124302354 849159.8615414147 1.5318605886276428 1.7615652075867931 1.7839976185245388 0.8430347281681874 1.2903658587400888 1.399192155359255 0.9190099428619436 0.8803265124508407 1.084792353032607 1.0 19.695676653353527 -5.253266095812984 24.99870106403347 1.0724607942294824 1.699383587681213 0.7292712883528809 0.17658647865588442 339.56224362838475 1038578.46712402 0.051500119820845416 0.08727280327014922 5.581281202464931e-06 5.253266095812984 0.6269227934517305 RGAEEEEEEEDDDS(ph)GEEMK ddPTM_KYSE-520_SHP099_60min_R1 2 RGAEEEEEEEDDDSGEEMK 19 1 Q08495;Q08495-4;Q08495-2;Q08495-3;E5RFK4 Q08495 DMTN Dematin 1 RGAEEEEEEEDDDS(1)GEEMK;RGAEEEEEEEDDDS(1)GEEMK 286.7 8.201899999999999e-44 300748000.0 323389.0 308508.0 266608.0 278208.0 263253.0 288594.0 259394.0 302368.0 356148.0 301597.0 True False 305449.96751001145 293686.81260005134 283793.97826788225 304648.80467371445 283969.5133953238 286792.77779749146 285616.07696148014 301319.1559812214 291480.50096046715 298925.08521891554 1.0218278177835676 0.9824763030007068 0.9493816086396626 1.0191476719011627 0.9499688297733891 0.9594135520190985 0.9554771114385109 1.0080089322732904 0.9750954850343309 1.0 18.18942444472942 -7.273858795940475 24.9500573068963 0.9936641538625558 0.9759025627524299 0.08743713853705037 0.02584221375974047 2081.199954135134 4181016.583633727 0.014051725947017306 0.006811631799084821 5.322812940747259e-08 7.273858795940475 -0.017761591110125874 RGAPS(ph)SPATGVLPSPQGK ddPTM_KYSE-520_SHP099_60min_R1 1 RGAPSSPATGVLPSPQGK 18 1 Q5SRE5-2;Q5SRE5 Q5SRE5-2 NUP188 Nucleoporin NUP188 homolog 1 RGAPS(0.5)S(0.5)PATGVLPSPQGK 105.06 8.1563e-05 0.0 266750.0 322320.0 243880.0 197210.0 192080.0 285820.0 189200.0 273360.0 348400.0 256520.0 True False 251952.8457470584 306835.26338781614 259600.89502179687 215952.77910665137 207195.60321429875 284036.0913604542 208326.18241405758 272411.7779627034 285139.3424492813 254247.43236953992 0.9909749860555271 1.2068372157318057 1.0210561129462101 0.8493803736541631 0.8149368561297683 1.1171640504420808 0.8193836235532268 1.0714435753544296 1.1215033315846472 1.0 17.95587367889742 -4.993622359755916 24.868704214846776 0.9644153828174387 1.1026662864613626 0.15485422563403628 0.11860341548549122 256.86606309049023 1001587.9790817898 0.031214127820086687 0.06471658711173321 1.0147934145899351e-05 4.993622359755916 0.1382509036439239 RGAQPGRHS(ph)VTGYGDCAVGAR ddPTM_KYSE-520_SHP099_60min_R1 4 RGAQPGRHSVTGYGDCAVGAR 21 2 Q96IF1;H0YJL9 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 RGAQPGRHS(0.989)VT(0.011)GYGDCAVGAR;RGAQPGRHS(1)VTGYGDCAVGAR;RGAQPGRHS(1)VTGYGDCAVGAR;RGAQPGRHS(1)VTGYGDCAVGAR 233.79 1.5312e-26 3949190000.0 372593.0 372304.0 486460.0 248856.0 237922.0 285661.0 221354.0 186002.0 451842.0 247189.0 True False 351924.5235442689 354417.95700030297 517817.9899635198 272507.1994187153 256645.1078089978 283878.08373843244 243730.62252685658 185356.80247519317 369798.8828098979 244999.09777013215 1.4364319164736616 1.4466092333647365 2.1135505994775423 1.1122783793856756 1.0475349099031883 1.1586903230344876 0.9948225309610499 0.7565611635398848 1.5093887535735246 1.0 17.902416910828116 -5.40549572001932 9.193632379535217 1.0669102485586315 1.6429082915867914 0.5371764297728181 0.24765883879904196 0.2595528234724209 18.8809426814458 0.06823352902885635 0.1012503892625182 3.9310111890765396e-06 5.40549572001932 0.5759980430281599 RGDDS(ph)FGDKYR ddPTM_KYSE-520_SHP099_60min_R1 4 RGDDSFGDKYR 11 2 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 RGDDS(1)FGDKYR;RGDDS(1)FGDKYR;RGDDS(1)FGDKYR;RGDDS(1)FGDKYR 168.5 1.0734000000000001e-05 4475720000.0 5245140.0 5329110.0 5085010.0 4249570.0 4796250.0 4326240.0 4207530.0 4018110.0 6079040.0 4041870.0 True False 4954181.628272631 5073091.5564428065 5412797.880903668 4653447.855120189 5173687.588070492 4299238.331422753 4632868.193935626 4004172.1142439204 4975239.576127666 4006062.1763272802 1.236671177384116 1.2663536742941341 1.3511517402024122 1.161601505492964 1.2914646254476458 1.0731831265195824 1.156464375743413 0.9995281995135951 1.2419276978593774 1.0 21.93375338208311 -6.2625921860806315 24.99927234737536 1.0980814189150963 1.2611575079337227 0.5233409387243919 0.07975488383426223 84.64685766037017 1835598.8648986514 0.02568394646167584 0.02392496752664949 5.462705827416421e-07 6.2625921860806315 0.16307608901862647 RGDDSFGDK ddPTM_KYSE-520_SHP099_60min_R1 1 RGDDSFGDK 9 1 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 121.36 0.0018095 436000000.0 513910.0 500510.0 318890.0 311130.0 469790.0 546100.0 412110.0 473610.0 411740.0 478710.0 False True 485402.38784581394 476464.74831917405 339446.1596420399 340699.70165535493 506759.80026054377 542691.5873344899 453770.10060601105 471967.15745140536 336978.39512074424 474469.0018307449 1.0230434147918672 1.0042062737096176 0.7154232591218445 0.7180652483950704 1.0680567082469126 1.1437872342355502 0.9563745974028506 0.9947270646350211 0.7102221511215878 1.0 18.855954310121785 -4.5544211411612086 24.99986451443915 0.9173536498037506 1.0183353172119178 0.07074377793230668 0.14551311020467855 530.5136119352691 420472.6300397702 0.04019582639773565 0.10634973344961668 2.78983718671816e-05 4.5544211411612086 0.10098166740816727 RGDDSFGDKYR ddPTM_KYSE-520_SHP099_60min_R1 4 RGDDSFGDKYR 11 2 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ;;; 196.38 3.5097e-07 15598100000.0 8820200.0 10472400.0 7153300.0 5390030.0 8842600.0 9124000.0 6088490.0 6727230.0 8798900.0 5922860.0 False True 8330925.92336721 9969290.184607135 7614413.163684673 5902296.830628392 9538462.312488312 9067053.731624048 6703973.987136184 6703894.80927728 7201241.562218659 5870388.068315348 1.419143986124579 1.698233586705294 1.2970885527623757 1.0054355456473598 1.6248435710700142 1.5445407741546568 1.1419984350472514 1.1419849473769335 1.2267062208521475 1.0 22.485024446718864 -6.280703595075253 0.09852737797927257 0.6429420129759967 2.0084624189610487 0.32993556714004546 0.19529331686676885 29.83536647695877 1.2483063178830223 6.255872324809968 10.346224414234909 5.239579145818239e-07 6.280703595075253 1.3655204059850519 RGDDSRPGPWR ddPTM_KYSE-520_SHP099_60min_R1 1 RGDDSRPGPWR 11 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 71.085 0.015182 622770000.0 1346000.0 1409500.0 1345400.0 1212600.0 1473000.0 1507600.0 1203400.0 1265500.0 1635300.0 1097000.0 False True 1271334.696815522 1341785.5042973666 1432126.636716111 1327845.1394185168 1588916.7197764574 1498190.5091841733 1325051.4160522025 1261110.2758699208 1338370.7425582942 1087281.4334530856 1.16927840180063 1.2340737761298877 1.3171627810914008 1.2212524729696042 1.4613665522920167 1.3779233812777303 1.2186830155316695 1.1598747454601281 1.2309331341268073 1.0 20.052293987237544 -7.044509905327858 3.6816516265016923 1.1486215820364634 1.299236330747161 0.3773392418064454 0.09466299981972268 0.29232782125443213 8.117399971333665 0.04880618061356985 0.028014915218877036 9.025891211096586e-08 7.044509905327858 0.1506147487106977 RGDDWNDR ddPTM_KYSE-520_SHP099_60min_R1 1 RGDDWNDR 8 1 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9;A0A087X0F4 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 0 96.03399999999999 0.0082992 452160000.0 288960.0 365850.0 232980.0 235260.0 335880.0 325950.0 288370.0 335530.0 277490.0 308400.0 False True 272930.81277252117 348274.0168479547 247998.2635811802 257619.0396665016 362311.84510422003 323915.6251449866 317521.2538199884 334366.124743291 227104.81095364864 305667.8159315696 0.8929000651924135 1.139387265180458 0.8113325991660829 0.8428072117483747 1.1853123757894466 1.0596981699162669 1.0387788222070211 1.0938872439817025 0.7429791398270434 1.0 18.221605131862024 -3.964353955533844 16.908615463421643 0.9943135131458807 0.48678751139498966 0.0417993735725849 0.13904376386119818 14772582.180033207 185790429.7013522 0.03470436897542471 227400575.21516317 0.00010855405336261056 3.964353955533844 -0.507526001750891 RGDDWNDREWDR ddPTM_KYSE-520_SHP099_60min_R1 9 RGDDWNDREWDR 12 2 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 0 ;;;;;;;; 200.13 2.4251999999999998e-08 13417690000.0 2764310.0 3398010.0 3568610.0 3280260.0 3250560.0 2908550.0 3084520.0 3112010.0 4104310.0 2027942.0 False True 2610968.2137846346 3234764.499083007 3798648.3105778806 3592014.924153871 3506360.578843555 2890396.6605781615 3396333.383614213 3101215.1636585915 3359070.76523539 2009976.0115950012 1.299004664096822 1.6093547785757325 1.8898973364182052 1.7870934296889716 1.744478818959192 1.4380254510025268 1.6897382675323964 1.5429115301717684 1.6711994301712212 1.0 20.938746852738603 -11.375793556179817 0.4558808740658207 0.03534152815587652 1.6504067058069276 0.5705258661074115 0.1635002789807812 71.070040651714 3.9133527020743633 68.83635674506706 0.09171005942871308 4.2092667020652495e-12 11.375793556179817 1.6150651776510512 RGDGEKS(ph)DEENEEK ddPTM_KYSE-520_SHP099_60min_R1 9 RGDGEKSDEENEEK 14 2 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 RGDGEKS(1)DEENEEK;RGDGEKS(1)DEENEEK;RGDGEKS(1)DEENEEK;RGDGEKS(1)DEENEEK;RGDGEKS(1)DEENEEK;RGDGEKS(1)DEENEEK;RGDGEKS(1)DEENEEK;RGDGEKS(1)DEENEEK;RGDGEKS(1)DEENEEK 204.23 1.4272e-11 12307092600.0 16383983.0 13664401.0 12690333.1 15027498.0 15019690.0 15038242.0 16124936.0 17057636.0 16607852.0 14656359.0 True False 15475130.802329635 13007942.665275944 13508372.276876869 16455706.891737964 16201654.152653944 14944382.75352538 17755001.8950899 16998467.041998167 13592284.726679062 14526515.061734768 1.0653023616857478 0.8954620299497026 0.9299114219390544 1.1328048621300097 1.1153159642075317 1.0287658595344278 1.2222478563946488 1.170168272965546 0.9356879243861714 1.0 23.792185303439513 -5.259470714422186 24.98590809336771 1.097977925255822 0.9567489413803305 0.27899701434530055 0.08896977102860294 197.18993583054362 2502684.199435535 0.024292781826439958 0.03948573240800238 5.50211021383708e-06 5.259470714422186 -0.14122898387549143 RGDGEKS(ph)DEENEEKEGSK ddPTM_KYSE-520_SHP099_60min_R1 12 RGDGEKSDEENEEKEGSK 18 3 D6R9U7;O15318 D6R9U7 POLR3G DNA-directed RNA polymerase III subunit RPC7 1 RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK;RGDGEKS(1)DEENEEKEGSK 256.76 7.2166e-26 48837335000.0 13520537.0 11629169.0 11809420.0 11878251.0 11965669.0 12117321.0 11375541.0 12442047.0 14645417.0 10086178.0 True False 12770525.86008771 11070486.265501454 12570674.108940084 13007156.403713623 12907299.074956436 12041692.304946989 12525491.698861469 12398888.442952607 11986178.453718504 9996822.30984775 1.2774585227455346 1.107400524124156 1.2574669949426693 1.3011290988837951 1.2911401918429228 1.2045519997974619 1.252947317721428 1.2402829677925364 1.1989988500556885 1.0 23.253038147574074 -8.309450510162732 2.1434873865556 1.0000221064402692 1.2405434451368944 0.657710455066864 0.05204441451441959 1.0117775558747506 6.115647215370823 0.05185803347701696 0.01424579053260773 4.903989027998967e-09 8.309450510162732 0.24052133869662518 RGDLPFVVPR ddPTM_KYSE-520_SHP099_60min_R1 4 RGDLPFVVPR 10 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ;;; 157.97 0.00016774 4726710000.0 1740678.0 1671070.0 1127037.0 1004527.0 1718227.0 1571844.0 1168763.0 1297112.0 1275610.0 1286692.0 False True 1644119.1213844363 1590789.2888727942 1199687.6083429584 1099996.9440579454 1853441.689525692 1562033.5385500744 1286912.9700676606 1292612.6212202166 1043991.3795112746 1275292.909911228 1.2892090190471472 1.247391306349792 0.9407153439177102 0.8625445460482605 1.4533458745996701 1.224842956790849 1.0091116794158617 1.013580967301225 0.8186287020006611 1.0 20.28239721338359 -6.942508147609123 3.817893602399709 0.946423813179322 1.1611576211193173 0.27967557115321784 0.16601979540366452 0.3500878023948913 10.444104561010457 0.08213227489986964 0.05195411863530699 1.1415418884490864e-07 6.942508147609123 0.2147338079399953 RGDS(ph)ES(ph)EEDEQDSEEVR ddPTM_KYSE-520_SHP099_60min_R1 6 RGDSESEEDEQDSEEVR 17 1 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 2 RGDS(0.996)ES(0.998)EEDEQDS(0.006)EEVR;RGDS(1)ES(1)EEDEQDSEEVR;RGDS(0.998)ES(0.888)EEDEQDS(0.115)EEVR;RGDS(1)ES(1)EEDEQDSEEVR;RGDS(1)ES(0.972)EEDEQDS(0.028)EEVR;RGDS(1)ES(0.999)EEDEQDS(0.001)EEVR 154.48 9.9863e-07 2749150000.0 1418664.0 1333853.0 1203430.0 1258086.0 1339118.0 1253791.0 1297906.0 1341593.0 1665069.0 1272674.0 True False 1339967.8798834307 1269772.69972583 1281005.02335608 1377654.115182652 1444498.968060833 1245965.6252988419 1429111.0048218821 1336939.3270131592 1362734.4425737169 1261399.0984853897 1.0622870124866757 1.006638344081976 1.0155429989558673 1.0921635482670426 1.1451561760233524 0.9877647976718238 1.1329570526393038 1.0598860650990425 1.0803356718821222 1.0 20.26659337656047 -5.25732334821247 24.855749208380594 1.075856417956695 1.0260043392360247 0.13460252702540387 0.048907281316722555 551.6702180113635 3331388.4838912333 0.01281563658232949 0.02119281434970087 5.5293827304320755e-06 5.25732334821247 -0.04985207872067021 RGDS(ph)QECS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RGDSQECSPR 10 1 Q13111;Q13111-2;Q13111-3 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 2 RGDS(1)QECS(1)PR;RGDS(1)QECS(1)PR 79.804 0.017822 74486000.0 300700.0 268220.0 268600.0 266680.0 270340.0 246410.0 257850.0 277410.0 316670.0 281290.0 True False 284019.57156941114 255334.30859357232 285914.3857751951 292025.18701973447 291614.2199758096 244872.06378885152 283915.9943734926 276447.729457981 259170.71060107357 278797.9894403083 1.0187289088403588 0.9158398491544372 1.0255252785329374 1.047443662007678 1.0459695945484762 0.8783135928649857 1.0183573954154361 0.9915700253540369 0.9296003573101914 1.0 18.088860631644025 RGDS(ph)QECSPR ddPTM_KYSE-520_SHP099_60min_R1 1 RGDSQECSPR 10 1 Q13111;Q13111-2;Q13111-3 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 RGDS(0.5)QECS(0.5)PR 60.255 0.040376999999999996 0.0 17954.0 16313.0 13182.0 14091.0 17412.0 14928.0 14310.0 16229.0 17562.0 18041.0 True False 16958.055829588317 15529.298993687788 14031.732811945723 15430.204403386377 18782.225339272 14834.828814739567 15756.594452141466 16172.705386877082 14373.18350199278 17881.170775685605 0.9483750276937952 0.8684721592617505 0.784721145386394 0.8629303191023714 1.0503912509359639 0.8296340883289152 0.8811836008840602 0.9044545007572069 0.8038166897626803 1.0 14.126153580107488 -10.12878176702391 4.698405331542478 1.0000095281415833 0.8818742179697243 0.1949752734649306 0.07220104505284466 7.2802596987106315e-06 1.3499053011002955e-06 0.07062679762278386 0.017128133165121046 7.433925988358733e-11 10.12878176702391 -0.11813531017185896 RGDSQECS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 RGDSQECSPR 10 1 Q13111;Q13111-2;Q13111-3 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 RGDS(0.076)QECS(0.924)PR;RGDS(0.221)QECS(0.779)PR;RGDS(0.361)QECS(0.639)PR 101.39 0.002043 270742000.0 288338.0 263245.0 235396.0 233851.0 263521.0 251055.0 256930.0 285321.0 322958.0 300730.0 True False 272343.3163524476 250598.31506119933 250570.00280691707 256076.12873013326 284258.603470612 249488.07262087608 282902.9917951575 284331.2880454217 264316.968308654 298065.7661643993 0.9137020995636099 0.8407483968587688 0.8406534102568298 0.8591262660767742 0.9536774622880648 0.8370235731240266 0.949129433532871 0.9539213164406064 0.8867739885393916 1.0 18.185271161000422 -7.80760515817206 0.2796510850865045 1.0145222154655573 0.8484283484260776 0.42736032803214175 0.042210197081942055 1.8312001713088168 0.5064329035556318 0.11472476270692566 0.08066777822992896 1.557380891755553e-08 7.80760515817206 -0.1660938670394797 RGDTWHDR ddPTM_KYSE-520_SHP099_60min_R1 3 RGDTWHDR 8 1 E9PMV7;E9PLA7;E9PIN3;Q9UBU9-2;Q9UBU9 E9PMV7 NXF1 Nuclear RNA export factor 1 0 ;; 74.92 0.042017 922790000.0 562590.0 614100.0 485040.0 524620.0 660750.0 601980.0 558040.0 621970.0 629850.0 420190.0 False True 531382.011204639 584597.714217107 516306.45449144 574479.7270672448 712747.2658467712 598222.8195268569 614452.1291455633 619812.5312388889 515485.1172264058 416467.4435028729 1.2759268929528542 1.4037056757668847 1.2397282489810717 1.3794108904056073 1.7114117248923792 1.4364215711443244 1.475390546683452 1.4882616658476289 1.2377560965887358 1.0 18.667844194678864 -8.020591393147143 3.72484504732706 1.000702256315218 1.4283460615009693 0.5459674961915446 0.1218905634105237 0.1661593651004164 6.3536626909722935 0.12564437413874083 0.03314449825690166 9.536930260872669e-09 8.020591393147143 0.4276438051857514 RGDTWHDRDR ddPTM_KYSE-520_SHP099_60min_R1 7 RGDTWHDRDR 10 2 E9PMV7;E9PLA7;E9PIN3;Q9UBU9-2;Q9UBU9 E9PMV7 NXF1 Nuclear RNA export factor 1 0 ;;;;;; 158.3 5.6349e-05 1445019000.0 405438.0 565936.0 450335.0 413392.5 368846.8 393514.0 319016.6 313306.2 558330.0 211737.3 False True 382947.545919385 538747.5850727458 479364.3146614763 452681.19890901254 397872.9447087871 391057.9331593929 351265.91122998134 312219.4139184167 456951.34635392466 209861.47225112666 1.8247634585405854 2.567158131951271 2.284193994826522 2.1570476660304774 1.8958837010000584 1.863409843477325 1.6737989468102359 1.4877405107727701 2.177395123803967 1.0 17.679077805935183 -9.523722564742759 0.13301510974558345 1.0625113421843045e-13 2.6905559855797714 0.5848797493314253 0.2713250804287696 17.781012815434387 0.602525483462847 9.685384087275025 2.9195825725936313 2.99417676066426e-10 9.523722564742759 2.6905559855796652 RGEAHLAVNDFELAR ddPTM_KYSE-520_SHP099_60min_R1 3 RGEAHLAVNDFELAR 15 1 Q02790 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed 0 ;; 179.81 1.6659999999999998e-08 1342720000.0 813580.0 698380.0 487400.0 437910.0 742330.0 597150.0 457930.0 551850.0 557050.0 479580.0 False True 768449.0955684795 664828.7765102488 518818.58386757347 479528.8347375575 800747.1477200652 593422.9653484551 504222.03336611734 549935.7611527586 455903.76208775037 475331.2943075945 1.616660011177812 1.398664014913412 1.0914883789070233 1.0088307680984427 1.6846085189625426 1.2484407663772326 1.0607802166710008 1.1569525670592318 0.9591284385175106 1.0 18.85857386167802 -1.0000000000000038 0.16591393176870053 0.950036688404521 3.0960647500754925 0.36258351971674896 0.19763055512115785 80.11547651656444 0.8509218473247127 0.5864368301658606 42.418866593661164 0.09999999999999913 1.0000000000000038 2.1460280616709717 RGEDVETSKK ddPTM_KYSE-520_SHP099_60min_R1 6 RGEDVETSKK 10 2 O60869-2;O60869-3;O60869 O60869-2 EDF1 Endothelial differentiation-related factor 1 0 ;;;;; 151.26 9.7259e-05 12461390000.0 12748970.0 12883670.0 6276840.0 5547660.0 12942620.0 14416740.0 7749840.0 10640950.0 10297940.0 12152760.0 False True 12041759.219658395 12264719.15441706 6681455.149699092 6074907.9384352 13961130.56056562 14326759.778041836 8533269.458349684 10604039.028066406 8428093.685941884 12045096.001104202 0.9997229759359741 1.0182334082926965 0.5547033538866429 0.5043469921599877 1.1590717549520377 1.1894267822131486 0.708443457616894 0.8803615203311214 0.6997116241472265 1.0 23.521942556315526 RGEEGHDPK ddPTM_KYSE-520_SHP099_60min_R1 4 RGEEGHDPK 9 1 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ;;; 84.81700000000001 0.010367 2107610000.0 1232050.0 3247610.0 815149.0 573846.0 2871790.0 6230250.0 1426040.0 1608630.0 1118120.0 11283600.0 False True 1163705.7304692152 3091589.9408380063 867694.8088245142 628384.1513069094 3097783.5347500537 6191364.698756111 1570198.0400092104 1603050.0379870662 915097.5935114538 11183636.08250796 0.10405432740156285 0.2764387108119052 0.07758610906354986 0.05618782180240548 0.27699251941818975 0.5536092781523771 0.14040138899593818 0.14333889498553656 0.08182469339669722 1.0 23.41488598525005 -10.861320715297998 2.616166988775571 1.3487913985059188 0.1957604669718733 0.7451658712281781 0.14206094934935892 27215345.273056492 17234595.218563773 59101719.003988914 0.03872152143674922 1.3761928105788695e-11 10.861320715297998 -1.1530309315340455 RGEEGHDPKEPEQLR ddPTM_KYSE-520_SHP099_60min_R1 4 RGEEGHDPKEPEQLR 15 2 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ;;; 203.04 1.7664000000000002e-11 12226240000.0 7966400.0 7378100.0 5776500.0 4505660.0 7186400.0 6875200.0 5513700.0 6287600.0 7004200.0 5151400.0 False True 7524487.911375322 7023645.001246116 6148862.43272679 4933876.571723924 7751928.794977281 6832289.326574058 6071078.604526366 6265789.78313687 5732413.841513372 5105762.603728556 1.473724592263741 1.3756309382886307 1.2042985367624603 0.9663348954220649 1.518270510523996 1.338152565413966 1.189064019563478 1.2271995918026404 1.1227341117127527 1.0 22.283695029437872 -13.163420216009838 0.05446298586494137 2.881078462835468e-09 1.784669443868219 0.3287103491433142 0.14433675122567774 562.0573318357814 2.607250235297879 84.96411622300965 20.472462435111808 6.864039657082298e-14 13.163420216009838 1.7846694409871404 RGEEGHDPKEPEQLRK ddPTM_KYSE-520_SHP099_60min_R1 5 RGEEGHDPKEPEQLRK 16 3 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ;;;; 189.42 3.6412e-12 28684100000.0 11157600.0 12918220.0 10727150.0 7904140.0 9641640.0 10155610.0 7642710.0 9211330.0 12998810.0 5914850.0 False True 10538665.68587582 12297609.320556462 11418639.25304684 8655347.089133654 10400382.214572633 10092225.070957737 8415309.712461643 9179378.046170577 10638553.77733393 5862449.030683668 1.7976558313287065 2.0976914692463153 1.9477592373566819 1.476404663619614 1.7740678273086425 1.7215032519917361 1.435459765776465 1.5657923843987935 1.8146944598839916 1.0 22.483072043924544 -10.710254058406976 0.11617001464825732 2.8206421198951175e-13 2.234837439699695 0.6355698513104528 0.177296881736069 37.98185278608661 0.6899149493535348 13.794296101890438 2.5819756584069933 1.9487042915871157e-11 10.710254058406976 2.234837439699413 RGEGDAPFS(ph)EPGTTSTQRPS(ph)SPETATK ddPTM_KYSE-520_SHP099_60min_R1 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGEGDAPFS(0.718)EPGT(0.195)T(0.187)S(0.18)T(0.171)QRPS(0.403)S(0.137)PET(0.007)AT(0.002)K 69.045 0.021105000000000002 1078600000.0 386580.0 325730.0 268870.0 331470.0 307120.0 363550.0 341200.0 331770.0 371580.0 307080.0 True False 365135.63677187596 310081.44186930207 286201.79040721076 362972.80913991085 331288.5967262356 361280.9495979744 375691.82579110167 330619.1673057005 304110.43876952905 304359.51010462485 1.1996853216328252 1.0187999112060284 0.9403412113156172 1.1925791607928973 1.088477887917331 1.187020407128999 1.2343686111925862 1.0862784185453866 0.9991816541726914 1.0 18.21541691982023 -4.228209501948215 22.289206498180288 1.0928189941834265 1.1996861717505676 0.1180858787056207 0.09221471453545811 8431.103288800012 5654812.372313119 0.024281175315182965 2.9812712999020534 5.912763359910702e-05 4.228209501948215 0.10686717756714104 RGEGDAPFSEPGT(ph)TSTQRPSSPETATK ddPTM_KYSE-520_SHP099_60min_R1 5 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFS(0.002)EPGT(0.234)T(0.164)S(0.054)T(0.054)QRPS(0.234)S(0.234)PET(0.022)AT(0.002)K;RGEGDAPFS(0.002)EPGT(0.822)T(0.134)S(0.023)T(0.007)QRPS(0.007)S(0.007)PETATK;RGEGDAPFS(0.14)EPGT(0.397)T(0.397)S(0.021)T(0.021)QRPS(0.011)S(0.011)PET(0.001)ATK;RGEGDAPFS(0.237)EPGT(0.606)T(0.107)S(0.013)T(0.013)QRPS(0.003)S(0.019)PETATK;RGEGDAPFS(0.043)EPGT(0.677)T(0.173)S(0.044)T(0.029)QRPS(0.029)S(0.005)PETATK 196.06 3.7658e-15 31058700000.0 8486980.0 7488840.0 7280480.0 6959310.0 7007920.0 7165560.0 7263500.0 8142960.0 9647050.0 7140720.0 True False 8016190.301024814 7129064.885421983 7749791.389979862 7620720.730007161 7559403.434389553 7120837.082110476 7997765.464928693 8114713.972341161 7895388.902340239 7077458.776196089 1.1326368057396534 1.0072916156572276 1.0949963306102266 1.0767594656486377 1.0680957209972608 1.0061290792763475 1.1300334933532796 1.1465575751050245 1.1155683349078809 1.0 22.754800010268948 -6.801400966264352 24.999994809474458 1.1102529909000807 1.063857547539527 0.07493392040903402 0.05129346834427801 288.99939293684366 180795.65000123085 0.020354549405275927 0.013723291506574484 1.5797888116030335e-07 6.801400966264352 -0.04639544336055357 RGEGDAPFSEPGTT(ph)STQRPSSPETATK ddPTM_KYSE-520_SHP099_60min_R1 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFS(0.001)EPGT(0.103)T(0.725)S(0.021)T(0.142)QRPS(0.004)S(0.004)PETATK 157.15 3.9766e-07 18207000000.0 5047400.0 4084800.0 4265200.0 3885400.0 3996400.0 3662000.0 4261100.0 4795900.0 4955000.0 4152500.0 True False 4767410.660257556 3888560.0765901967 4540141.616561291 4254667.247811894 4310893.943594454 3639144.0996500757 4691853.572328444 4779264.142271478 4055296.9053851627 4115712.080596119 1.1583440646234526 0.9448085775783854 1.103124204913697 1.0337621205017937 1.0474235950368191 0.8842076482480724 1.139985859178195 1.16122412080372 0.985320845086373 1.0 21.97271062968409 RGEGDAPFSEPGTTST(ph)QRPSSPETATK ddPTM_KYSE-520_SHP099_60min_R1 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFS(0.002)EPGT(0.183)T(0.183)S(0.025)T(0.55)QRPS(0.05)S(0.007)PETATK 205.44 7.3855e-16 12584000000.0 2783900.0 2240500.0 2310100.0 2195300.0 2216900.0 2031300.0 2218300.0 2301200.0 2740100.0 2264000.0 True False 2629471.517432939 2132863.016940936 2459012.742290685 2403940.651958985 2391357.4175644414 2018621.9032275237 2442547.4125216906 2293217.674304118 2242566.9122998766 2243942.7213653466 1.1718086617794834 0.9504979769016461 1.0958447017731705 1.0713021455807419 1.0656945004859122 0.8995870901728167 1.0885070234927838 1.021959095688855 0.999386878705784 1.0 21.097604419666233 -6.09118138649772 24.989189268706923 1.0057814701055732 1.0657617763717877 0.21086202520564168 0.06627534964405352 114.26079342332798 31309.394398571087 0.02096487902433074 0.02096487762977697 8.10622424326852e-07 6.09118138649772 0.059980306266214534 RGEGDAPFSEPGTTSTQRPS(ph)S(ph)PETATK ddPTM_KYSE-520_SHP099_60min_R1 1 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGEGDAPFSEPGT(0.005)T(0.005)S(0.012)T(0.011)QRPS(0.911)S(0.952)PET(0.098)AT(0.006)K 117.54 0.00020164 684420000.0 335390.0 334370.0 326570.0 309300.0 328550.0 318230.0 292760.0 319600.0 361620.0 322910.0 True False 316785.2481166107 318306.36330039764 347621.22473047435 338695.779005564 354405.01580621535 316243.8085285754 322355.03786225955 318491.3821952009 295958.9236983617 320049.2686201789 0.9898015061317268 0.9945542593260862 1.0861490989470646 1.0582613747745007 1.1073451826156442 0.9881097678866447 1.007204419657078 0.9951323543662683 0.9247292611363326 1.0 18.287934486182888 -6.4734324449573295 22.755160217643592 0.9836888687635331 1.0471377870135012 0.395807077592797 0.03968532031129843 157.75323954184236 72597.64332983347 0.014908833745404498 0.013147855255523228 3.3617665767418145e-07 6.4734324449573295 0.06344891824996812 RGEGDAPFSEPGTTSTQRPS(ph)SPETATK ddPTM_KYSE-520_SHP099_60min_R1 5 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFSEPGTT(0.001)S(0.033)T(0.033)QRPS(0.459)S(0.459)PET(0.014)AT(0.001)K;RGEGDAPFS(0.001)EPGT(0.013)T(0.037)S(0.06)T(0.06)QRPS(0.622)S(0.191)PET(0.014)AT(0.001)K;RGEGDAPFSEPGTT(0.002)S(0.002)T(0.002)QRPS(0.49)S(0.49)PET(0.012)AT(0.001)K;RGEGDAPFSEPGT(0.022)T(0.099)S(0.099)T(0.099)QRPS(0.341)S(0.341)PET(0.001)ATK;RGEGDAPFSEPGTT(0.007)S(0.014)T(0.014)QRPS(0.478)S(0.478)PET(0.008)AT(0.001)K 116.96 0.00013588 20575890000.0 9091680.0 8099980.0 7583520.0 7675130.0 7606140.0 8181130.0 7890200.0 8413780.0 9743320.0 7718010.0 True False 8587346.386585249 7710844.802482154 8072365.833261016 8404572.047588024 8204699.944983365 8130068.533033913 8687818.416931277 8384594.560971015 7974178.697109449 7649634.435920918 1.122582583327257 1.0080017374783043 1.0552616469298257 1.0986893711053816 1.0725610502975131 1.062804843961822 1.1357168096994656 1.0960778101498412 1.042426113810687 1.0 22.866959374634618 -3.918320035861299 19.592850739961317 1.0695974489453899 3.2341694642516297 0.15286651277444552 0.03944093706602886 595.7993873427127 158947.97165557343 0.00954688889557115 6366.518284224746 0.00012069241131136393 3.918320035861299 2.1645720153062395 RGEGDAPFSEPGTTSTQRPSS(ph)PETATK ddPTM_KYSE-520_SHP099_60min_R1 2 RGEGDAPFSEPGTTSTQRPSSPETATK 27 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RGEGDAPFSEPGTTST(0.002)QRPS(0.212)S(0.785)PETATK;RGEGDAPFSEPGT(0.003)T(0.154)S(0.015)T(0.011)QRPS(0.164)S(0.654)PETATK 242.07 3.7146999999999997e-31 18926380000.0 3577290.0 3136190.0 3048660.0 3031430.0 3014310.0 3059330.0 2893730.0 3269910.0 3756060.0 3047810.0 True False 3378850.5925491787 2985522.724882837 3245181.50162847 3319536.195767335 3251519.0479221814 3040235.586669156 3186256.4684832506 3258567.445412731 3074054.1865673047 3020808.774560298 1.1185251516097694 0.9883190058322718 1.0742757134969034 1.0988898813201176 1.0763736769122254 1.0064309969808287 1.0547693370451874 1.0787069584989009 1.01762621072059 1.0 21.52650342974708 -6.225964414962712 24.916921069355595 1.037879782864501 1.0683686081548767 0.20102640891785495 0.03839318769923355 1262.557449389068 886795.3961695492 0.012689333363293292 0.012688295710532451 5.943408554697434e-07 6.225964414962712 0.030488825290375665 RGEIQHR ddPTM_KYSE-520_SHP099_60min_R1 1 RGEIQHR 7 1 B1AHB1;P33992 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 0 110.12 0.0073477 118120000.0 43324.0 88963.0 19756.0 14292.0 94261.0 145030.0 29457.0 38884.0 31046.0 186890.0 False True 40920.73135574716 84689.08394381453 21029.503370717634 15650.307382953506 101678.8044282746 144124.81397385296 32434.801032615745 38749.1204795938 25408.82900597127 185234.29999822 0.22091335868216838 0.4571997947714238 0.11352920798642431 0.08448925162944389 0.5489199593663359 0.7780676363677673 0.17510148516191346 0.2091897692812085 0.13717129606242168 1.0 17.498991742881145 -11.003569577183496 2.633328525963336 1.7050388871151896 0.31000712834100064 0.49080774309878394 0.2129462727768091 59472516.02232607 24471764.41891734 254111353.24710056 0.06036126488184132 9.918144305134011e-12 11.003569577183496 -1.395031758774189 RGERPDYK ddPTM_KYSE-520_SHP099_60min_R1 4 RGERPDYK 8 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L0N7 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 ;;; 91.087 0.0028068000000000004 3984340000.0 3258650.0 2955010.0 1914110.0 2185320.0 3107360.0 3123080.0 2621200.0 3070190.0 2529290.0 2035300.0 False True 3077886.1885422757 2813046.88403956 2037496.5932842845 2393012.1557595828 3351891.5535400994 3103587.6992722964 2886176.476446767 3059540.2274777307 2070034.6942122367 2017268.8254394406 1.5257689752241081 1.3944829011209092 1.010027304040867 1.1862633901747281 1.6615988465542888 1.5385097217254684 1.4307346844652913 1.516674519971944 1.0261570833333538 1.0 20.943971922628283 -7.773840882605701 24.30753091893219 1.0130778477578084 1.4004599181299568 0.44074557885473953 0.1777840494442144 191.38211193065547 375101.2478405303 0.18456407730641977 0.049130469443837185 1.6832906743989066e-08 7.773840882605701 0.38738207037214845 RGERPDYKGEEELR ddPTM_KYSE-520_SHP099_60min_R1 3 RGERPDYKGEEELR 14 3 Q9UQ35;Q9UQ35-2;I3L4D8;I3L0N7 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 ;; 231.13 2.7329e-15 2398822000.0 1219443.0 1329639.0 1090067.0 910270.0 1083602.0 1199880.0 1003590.0 1128404.0 1275414.0 812583.0 False True 1151798.0658906463 1265761.1466111706 1160334.4629888672 996781.7871173449 1168875.3125480022 1192391.1038471137 1105042.6712945246 1124489.8298954726 1043830.9681705164 805384.1468000087 1.4301225948723055 1.5716241145797991 1.4407217569394235 1.237647638183352 1.451326447375745 1.4805246770560108 1.3720690625524896 1.396215500843107 1.2960659485512798 1.0 19.619317548957742 -12.519422410077523 0.20987704743994193 3.9542166041451904e-14 1.481905626446471 0.7247412719310509 0.07932770984842599 40.33736583474872 0.7024815438019061 17.46504373027627 0.1887446987428169 3.023970777007213e-13 12.519422410077523 1.4819056264464314 RGES(ph)LDNLDSPR ddPTM_KYSE-520_SHP099_60min_R1 7 RGESLDNLDSPR 12 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 RGES(0.939)LDNLDS(0.061)PR;RGES(1)LDNLDSPR;RGES(0.995)LDNLDS(0.005)PR;RGES(1)LDNLDSPR;RGES(1)LDNLDSPR;RGES(0.972)LDNLDS(0.028)PR;RGES(0.96)LDNLDS(0.04)PR 187.65 1.0193999999999999e-07 14526720000.0 13015540.0 10354090.0 10189950.0 9280440.0 10332680.0 9993790.0 9398400.0 10062040.0 13405010.0 10107400.0 True False 12293542.05036428 9856663.97459405 10846810.481496451 10162450.227333974 11145803.131092861 9931415.049601829 10348481.991544805 10027137.13173779 10970998.096802657 10017856.299438216 1.2271629461338631 0.9839094991956308 1.0827476615036613 1.0144336196860666 1.1125936326036039 0.9913712827123269 1.0330036369283049 1.0009264289706465 1.0951442872481503 1.0 23.256070486412625 -4.25149024805878 24.908458924191216 1.036795825406239 1.227163054774692 0.6329066938716783 0.04390532223012194 801.0347306899599 2005414.189373995 0.010117769915754407 0.13074082941294596 5.6041500115932656e-05 4.25149024805878 0.19036722936845285 RGES(ph)PGLHHFHHVDD ddPTM_KYSE-520_SHP099_60min_R1 4 RGESPGLHHFHHVDD 15 1 Q5VT52-5 Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 RGES(1)PGLHHFHHVDD;RGES(1)PGLHHFHHVDD;RGES(1)PGLHHFHHVDD;RGES(1)PGLHHFHHVDD 159.26 3.5255e-08 1767111000.0 925003.0 555662.0 593268.0 750846.0 503419.0 550396.0 559878.0 569311.0 615626.0 494347.0 True False 873691.2396422359 528967.1634543344 631511.0045423626 822206.1780899194 543035.2112377086 546960.7744049698 616475.9321227155 567336.1930191863 503843.837068546 489967.4701761467 1.7831617256715795 1.0795964949758134 1.2888835340748848 1.678083195593231 1.1083087027032297 1.1163205879940021 1.258197675656076 1.157905835698082 1.0283209962641207 1.0 18.902326443718895 -1.0000000012577253 0.16454960823585446 0.9516278142093934 3.2387927473176816 0.4084200864229679 0.19702695848196944 70.82935232159814 0.7477822670934521 0.5611706822950513 39.55535996549576 0.09999999971039805 1.0000000012577253 2.287164933108288 RGESLDNLDS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 RGESLDNLDSPR 12 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 RGESLDNLDS(1)PR 126.25 0.00015241 0.0 462890.0 432170.0 517360.0 339730.0 487640.0 401700.0 428660.0 428010.0 821970.0 422570.0 True False 437212.56895166193 411407.90449960536 550709.8534052672 372017.8370564513 526014.4937079368 399192.84129695105 471993.1361184455 426525.33320828504 672720.9681774863 418826.358554485 1.0438993631170543 0.9822875186736496 1.3148882398566266 0.8882388356368349 1.2559249984251117 0.9531225366872896 1.1269422911859164 1.0183822591309006 1.6062049449305904 1.0 18.675992714602387 RGESMQPNR ddPTM_KYSE-520_SHP099_60min_R1 3 RGESMQPNR 9 1 K7ENA8;O75821;K7EP16;K7ER90;K7EL20 K7ENA8 EIF3G Eukaryotic translation initiation factor 3 subunit G 0 ;; 176.33 0.00011706 1090070000.0 416140.0 351380.0 266870.0 303173.0 344225.0 391370.0 320732.0 409260.0 393610.0 299367.0 False True 393055.8846454762 334499.1773678676 284072.867207097 331986.47076771414 371313.5491276652 388927.3146586697 353154.7206026724 407840.3725820023 322140.3461006365 296714.84128400194 1.3246923643743893 1.1273422519762004 0.9573935229454713 1.1188738296037972 1.2514154921299023 1.310778095816266 1.1902158957551057 1.3745196257022954 1.085690033928227 1.0 18.178717564757974 -4.2505484202073065 22.84104048768743 1.1703713357312509 1.3246926713444929 0.13294741101493823 0.12426299177966833 1116.0321027426717 2340437.38549993 0.03260838206605275 0.43150689133102843 5.616316576260388e-05 4.2505484202073065 0.15432133561324202 RGESMQPNRR ddPTM_KYSE-520_SHP099_60min_R1 2 RGESMQPNRR 10 2 K7ENA8;O75821;K7EP16;K7ER90;K7EL20 K7ENA8 EIF3G Eukaryotic translation initiation factor 3 subunit G 0 ; 125.23 0.00029121 401040000.0 66225.0 79600.0 51785.0 53523.0 50040.0 65455.0 46661.0 61361.0 62256.0 47596.0 False True 62551.36723373548 75775.8965179641 55123.14395892955 58609.80982772324 53977.86331134684 65046.47106570052 51377.9492474754 61148.15301276504 50951.87974604612 47174.33646912767 1.3259617816706548 1.6062949092575824 1.1684985541874833 1.2424087801654464 1.144220933487249 1.3788529088961097 1.089108042486166 1.2962164937451162 1.0800762355055187 1.0 15.525714605283358 -1.0000000000124796 0.1202152134122638 0.9372873661144886 2.5119234697656867 0.427689856342919 0.12743808676658305 90.50138514679666 0.7492513043685403 0.8598889630711029 23.87284133743611 0.09999999999712647 1.0000000000124796 1.5746361036511982 RGFCFITFK ddPTM_KYSE-520_SHP099_60min_R1 1 RGFCFITFK 9 1 Q14103-3;Q14103;H0YA96;H0Y8G5;Q14103-4;Q14103-2 Q14103-3 HNRNPD Heterogeneous nuclear ribonucleoprotein D0 0 96.34200000000001 0.0094052 62037000.0 61300.0 98253.0 72885.0 75025.0 130620.0 120120.0 81693.0 59821.0 68351.0 55556.0 False True 57899.5668014796 93532.77839924023 77583.2837201232 82155.35344291119 140899.0508738635 119370.28652374842 89951.32568684785 59613.494913326365 55940.18138849267 55063.817061913935 1.051499330974043 1.6986250389084299 1.4089703158952513 1.4920025132027344 2.558831886199174 2.1678534633646644 1.6335831855918432 1.0826255442171173 1.0159154300108426 1.0 15.748817001568286 -7.2420352586969186 4.044980630710974 1.0227401686750348 1.7510347296133346 0.395394186651701 0.3881037083342709 0.2422346026346526 9.310913004820652 0.2306696795263995 0.11721267059803854 5.727495297690352e-08 7.2420352586969186 0.7282945609382998 RGFCFITYTDEEPVKK ddPTM_KYSE-520_SHP099_60min_R1 1 RGFCFITYTDEEPVKK 16 2 A0A087WUK2;O14979-3;O14979-2;O14979 A0A087WUK2 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like 0 97.86 0.00054105 138920000.0 357170.0 318750.0 302470.0 197420.0 361530.0 282560.0 255100.0 288880.0 319080.0 253630.0 False True 337357.0680992569 303436.7715464954 321967.7001691109 216182.73744351286 389980.3541756842 280796.43822968967 280887.9975360786 287877.9427050988 261143.1153522297 251383.03552115383 1.3420041149549584 1.2070694067220031 1.280785314337639 0.8599734544351189 1.5513391878938763 1.1170063152732543 1.117370537569318 1.1451764917560394 1.0388255309704644 1.0 17.939527767809743 -7.420527265415872 0.8376076898276135 1.0011338467767112 1.2283611748832717 0.1955014163661275 0.16463316835135425 1.048202120279286 1.3928533017663614 0.14927586387625275 0.06156309968561288 3.797280985359538e-08 7.420527265415872 0.22722732810656043 RGFEGS(ph)CSQK ddPTM_KYSE-520_SHP099_60min_R1 2 RGFEGSCSQK 10 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 RGFEGS(0.955)CS(0.045)QK;RGFEGS(0.91)CS(0.09)QK 113.61 0.00066167 1640700000.0 3406700.0 3074200.0 2813400.0 2962100.0 3021700.0 3127400.0 3132400.0 3090500.0 3541100.0 3211900.0 True False 3217723.5599119146 2926510.817531725 2994756.265599158 3243617.0934121627 3259490.598878834 3107880.73654987 3449053.561277985 3079779.7768281205 2898125.5038666786 3183445.06482039 1.010767735705676 0.9192905038230457 0.9407281120361102 1.0189015445112346 1.0238878110066378 0.9762633478097152 1.0834342955663916 0.9674361310211211 0.9103739643235184 1.0 21.602157437866634 -5.256289901722106 24.850105575025005 0.9996630363175052 0.9531649544382357 0.13025452602046528 0.047067599613831265 749.9999667423464 3619306.0562128653 0.013199327497974358 0.02197039655710543 5.542556108649237e-06 5.256289901722106 -0.046498081879269515 RGFEGSCS(ph)QK ddPTM_KYSE-520_SHP099_60min_R1 3 RGFEGSCSQK 10 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 RGFEGS(0.048)CS(0.952)QK;RGFEGS(0.111)CS(0.889)QK;RGFEGS(0.029)CS(0.971)QK 125.03 0.00046771 4772680000.0 7666200.0 6927000.0 6451400.0 6383500.0 6879300.0 6941700.0 6949600.0 6851100.0 7969700.0 6992400.0 True False 7240940.603809189 6594216.522361024 6867267.56660497 6990185.920730732 7420661.772137263 6898374.27540713 7652133.389559901 6827335.133158763 6522603.37978772 6930452.776004876 1.0448005112853964 0.9514842298892803 0.9908829608335734 1.0086189382795694 1.0707326075187504 0.9953713701493198 1.1041318131556543 0.9851210813811279 0.9411511182026603 1.0 22.724518178015465 -3.913675305493965 20.072077938935394 1.0086360471328983 3.000247408194147 0.05617588936662721 0.04681306371538263 1560.8831307539097 380478.7509594249 0.011596263837357736 6818.951039423457 0.00012199013010902927 3.913675305493965 1.9916113610612485 RGFEGSCS(ph)QKESEEGNPVR ddPTM_KYSE-520_SHP099_60min_R1 3 RGFEGSCSQKESEEGNPVR 19 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 RGFEGS(0.178)CS(0.822)QKESEEGNPVR;RGFEGS(0.192)CS(0.805)QKES(0.003)EEGNPVR;RGFEGSCS(1)QKESEEGNPVR 163.18 7.3573999999999994e-09 2565180000.0 995727.0 1023740.0 1063753.0 888675.0 993631.0 879921.0 690376.0 891020.0 1250252.0 747955.0 True False 940492.0383774376 974557.993734932 1132324.2204449794 973134.4048101198 1071824.1067129667 874429.0866488788 760165.9435004625 887929.2595856322 1023237.7530881155 741328.7006001846 1.2686572604244366 1.3146098255010543 1.5274253101603137 1.3126895046991487 1.4458149345158373 1.1795430096540647 1.0254101087480183 1.1977537883893594 1.3802753788699877 1.0 19.49975384096027 -6.318772404805257 7.328963246877824 1.159783319712548 1.3755243655013663 0.45550755771326146 0.11876504503856386 0.2712004841951236 30.497639862006658 0.042358905628398155 0.037409962636511654 4.799849223413342e-07 6.318772404805257 0.21574104578881825 RGFGFVTFDDHDPVDK ddPTM_KYSE-520_SHP099_60min_R1 1 RGFGFVTFDDHDPVDK 16 1 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 119.46 0.00036792 559920000.0 982350.0 880460.0 552210.0 487960.0 945110.0 961630.0 612030.0 625000.0 682870.0 609490.0 False True 927857.0872338244 838161.3800025968 587806.3401672401 534335.571689477 1019484.7800596913 955628.1104714621 673899.9652371865 622832.0208760963 558878.0217518392 604090.3927760444 1.5359573638804924 1.3874767584879137 0.9730436821980029 0.8845291666268432 1.6876361422911204 1.5819289992015217 1.1155614677802412 1.0310245425588154 0.9251562819656248 1.0 19.204404917120254 -6.989156670144667 24.19825405292863 1.0015127868939933 1.3242455877710777 0.3144526344727655 0.2388870759022836 212.6122831873451 474468.9046837591 0.11163932369211937 0.07517777528865018 1.0252819928033605e-07 6.989156670144667 0.32273280087708445 RGFS(ph)DSGGGPPAK ddPTM_KYSE-520_SHP099_60min_R1 4 RGFSDSGGGPPAK 13 1 Q9H307;G3V5F0;G3V579 Q9H307 PNN Pinin 1 RGFS(1)DSGGGPPAK;RGFS(0.991)DS(0.009)GGGPPAK;RGFS(0.998)DS(0.002)GGGPPAK;RGFS(0.606)DS(0.394)GGGPPAK 126.26 7.839e-05 1782420000.0 2288830.0 2215390.0 1855810.0 1545970.0 1686360.0 2272630.0 1800110.0 2080540.0 2752640.0 2130500.0 True False 2161864.037230514 2108959.3390318137 1975438.4820009887 1692898.523987169 1819066.937924119 2258445.6731807077 1982082.6861805979 2073323.0923416875 2252829.9644075516 2111625.427503917 1.0237914400310961 0.9987374235802536 0.9355061064670402 0.8017039868611019 0.861453416041868 1.0695294931404298 0.9386525945198305 0.9818612076444329 1.0668700684621646 1.0 21.00992251301257 -6.260155798069929 24.999936094589415 1.0057033671394595 0.9221958147498115 0.2836905979010942 0.06890377439632543 185.81822714085894 3619135.694164613 0.025911014090920777 0.02456960008963674 5.493437678482798e-07 6.260155798069929 -0.08350755238964802 RGGADVNIR ddPTM_KYSE-520_SHP099_60min_R1 1 RGGADVNIR 9 1 P08621;P08621-2;P08621-4 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 0 89.82700000000001 0.01023 301060000.0 493500.0 516660.0 412420.0 351190.0 481510.0 485990.0 395410.0 436620.0 494110.0 342480.0 False True 466124.5712321398 491838.8780775297 439005.2530953308 384566.992010876 519402.09758286603 482956.75614116306 435381.90162971686 435105.4671278743 404392.0794994679 339445.8936454082 1.3731925469072328 1.4489463189421115 1.2932996430763255 1.1329257451928472 1.530146946262498 1.4227797866533307 1.2826253308120006 1.2818109609609654 1.1913300089053478 1.0 18.372822107256546 -8.006724443221472 1.0983072450912508 1.0016921367323899 1.35998139623647 0.551545602146954 0.10062871092384856 0.433624351462757 1.1765270921049975 0.10086763449126795 0.03263467477751482 9.846356519654073e-09 8.006724443221472 0.3582892595040801 RGGDGYDGGYGGFDDYGGYNNYGYGNDGFDDR ddPTM_KYSE-520_SHP099_60min_R1 2 RGGDGYDGGYGGFDDYGGYNNYGYGNDGFDDR 32 1 P31942-4;P31942-3;P31942;P31942-5 P31942-4 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 0 ; 199.65 2.7945e-15 1017060000.0 345060.0 359310.0 242100.0 191605.0 302750.0 406170.0 305710.0 266920.0 303430.0 293580.0 False True 325918.8339399436 342048.2082646947 257706.15337369623 209815.0815918559 326574.7025881346 403634.9423688887 336614.1502420803 265994.1168195965 248334.76084783455 290979.1096017838 1.1200764013127134 1.1755077838158243 0.885651735364704 0.7210657901833434 1.1223304072758513 1.387161239586164 1.1568327042540951 0.9141347541533815 0.8534453252939371 1.0 18.150556055213823 -7.3820365441763665 0.00917473368342248 5.7326020410351265e-08 2.0524683467856546 0.01788080451632179 0.1835671206307927 9462.021724527422 88.05381175117901 9833.024502177877 9852.087051519438 4.149191273490767e-08 7.3820365441763665 2.052468289459634 RGGGSGGGEES(ph)EGEEVDED ddPTM_KYSE-520_SHP099_60min_R1 6 RGGGSGGGEESEGEEVDED 19 1 Q96QR8 Q96QR8 PURB Transcriptional activator protein Pur-beta 1 RGGGS(0.003)GGGEES(0.997)EGEEVDED;RGGGSGGGEES(1)EGEEVDED;RGGGSGGGEES(1)EGEEVDED;RGGGSGGGEES(1)EGEEVDED;RGGGS(0.001)GGGEES(0.999)EGEEVDED;RGGGSGGGEES(1)EGEEVDED 293.09 8.878499999999999e-44 5180680000.0 2999200.0 2859120.0 2299040.0 2423020.0 2607890.0 2599920.0 2352000.0 2620000.0 3169300.0 2566360.0 True False 2832828.397243026 2721763.583573389 2447239.796994059 2653303.092292474 2813116.1061356594 2583692.9348886427 2589763.113307945 2610911.831512599 2593835.0115514 2543624.046997869 1.1136977575701459 1.07003375234865 0.9621075095128274 1.0431192044374855 1.1059480702173186 1.0157526769484921 1.0181391060383047 1.026453510138083 1.0197399315409026 1.0 21.2784540223314 -6.405110909228764 19.23287095321281 1.01778146927773 1.0540878790426844 0.22441922696344418 0.03934220002889118 7.242822252752272 1155.7525286552427 0.01481671210854402 0.01306702997297939 3.9344958428162987e-07 6.405110909228764 0.03630640976495436 RGGIPAS(ph)PIDPFQSR ddPTM_KYSE-520_SHP099_60min_R1 4 RGGIPASPIDPFQSR 15 1 Q96LD4-2;Q96LD4 Q96LD4-2 TRIM47 Tripartite motif-containing protein 47 1 RGGIPAS(1)PIDPFQSR;RGGIPAS(1)PIDPFQSR;RGGIPAS(1)PIDPFQSR;RGGIPAS(1)PIDPFQSR 140.63 7.481e-06 3759220000.0 1029680.0 1102630.0 1095220.0 924390.0 1084050.0 1136820.0 1131470.0 1194430.0 1902070.0 1324360.0 True False 972561.597783808 1049657.999718627 1165819.6336139583 1012243.747672013 1169358.5675992325 1129724.6846980327 1245850.029683053 1190286.8011120588 1556702.0352827345 1312627.200736489 0.7409275057214441 0.7996619292436458 0.888157454728837 0.7711585948425137 0.8908535240951344 0.8606592062576234 0.9491270857285538 0.9067972996782427 1.1859437579910732 1.0 20.32402580389706 -7.038963208798374 0.9088167918837713 1.0690747616251324 0.8100550884350508 0.651508006578365 0.0718079000128774 0.3623244156597403 0.5508632908555077 0.05859103587846857 0.027690117201482147 9.14190683737086e-08 7.038963208798374 -0.25901967319008157 RGILTLK ddPTM_KYSE-520_SHP099_60min_R1 4 RGILTLK 7 1 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;Q6S8J3;C9JUM1;C9JZR7;C9JTX5;A5A3E0;P0CG38;P0CG39;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65;P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P60709;P63261;P68133 ACTB;POTEE;POTEF;POTEI;POTEJ;ACTG1;ACTA1;ACTC1;ACTG2;ACTA2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;POTE ankyrin domain family member F;POTE ankyrin domain family member I;POTE ankyrin domain family member J;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ;;; 145.34 0.0036707000000000003 8934360000.0 3257430.0 3154790.0 2391990.0 2050030.0 2808070.0 3045940.0 2123020.0 2671900.0 2459700.0 2219530.0 False True 3076733.8643742814 3003229.152963669 2546181.502719317 2244864.234836008 3029049.1332672606 3026929.1586259254 2337635.580278501 2662631.8025261494 2013080.4839910967 2199866.6909682103 1.3986001410931597 1.3651868839569914 1.1574253627153588 1.0204546684817493 1.3769239498481194 1.3759602666167496 1.0626260172381878 1.21036052477992 0.9150920336473185 1.0 21.06898467029854 -7.430905244074217 1.3716476425694526 0.9682968630032661 1.265715715929432 0.4312326284266771 0.1310202354911878 0.46586099154764143 1.5394936472532637 0.12225513961146106 0.04254682649230274 3.707616070538982e-08 7.430905244074217 0.297418852926166 RGLAPNT(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 2 RGLAPNTPGK 10 1 O43663-2;O43663-4;O43663-3;O43663;H0YL53;G3V3N7 O43663-2 PRC1 Protein regulator of cytokinesis 1 1 RGLAPNT(1)PGK;RGLAPNT(1)PGK 132.14 0.00038686 2235300000.0 3153300.0 3620700.0 3115100.0 2542800.0 3036100.0 3033800.0 2549100.0 2822600.0 3677800.0 3545200.0 True False 2978380.1630522935 3446756.1372185024 3315904.33033623 2784466.947479304 3275023.7969540423 3014864.928869031 2806787.9048185777 2812809.05939979 3010004.229793246 3513792.2861238606 0.8476255625052351 0.980921994401864 0.9436825117497412 0.7924392567185321 0.9320482061182936 0.8580088643187253 0.798791640559609 0.8005052178262535 0.8566255443384919 1.0 21.74459747989752 -5.234930067516123 24.651304616084232 0.8543587484009858 0.9297612340859879 0.13616637355933248 0.06829708299051553 1016.5945231706208 945340.948178347 0.017929729656804054 0.031040875230042158 5.821969587767344e-06 5.234930067516123 0.07540248568500207 RGLLYDS(ph)DEEDEERPAR ddPTM_KYSE-520_SHP099_60min_R1 11 RGLLYDSDEEDEERPAR 17 2 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 RGLLY(0.001)DS(0.999)DEEDEERPAR;RGLLY(0.018)DS(0.982)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR;RGLLYDS(1)DEEDEERPAR 277.17 2.8631e-30 13838380000.0 4005833.0 3960060.0 3886427.0 3139055.0 3520525.0 3542807.0 3014841.0 3304665.0 4732895.0 3365948.0 True False 3783621.458059892 3769812.773428759 4136952.302923061 3437389.843408704 3797570.288452824 3520695.027375467 3319610.550292708 3293201.8884296096 3873520.5745737446 3336128.319387919 1.1341354695715287 1.1299963348293536 1.2400459175629281 1.0303530063374071 1.1383166128182882 1.0553236237691872 0.99504882081447 0.9871328597557707 1.1610826094616233 1.0 21.66974335036822 -5.833284023784306 1.1845386894903167 1.0362894444362996 1.1571884481372687 0.35224577001087276 0.06529792994704572 0.51837441153282 1.5401065738752697 0.02760696016226396 0.037500761340217376 1.467965930179194e-06 5.833284023784306 0.12089900370096918 RGLLYDS(ph)DEEDEERPARK ddPTM_KYSE-520_SHP099_60min_R1 2 RGLLYDSDEEDEERPARK 18 3 P49736 P49736 MCM2 DNA replication licensing factor MCM2 1 RGLLYDS(1)DEEDEERPARK;RGLLYDS(1)DEEDEERPARK 103.84 0.0006159 1324550000.0 1723320.0 1641400.0 1439110.0 1258170.0 1293880.0 1668350.0 1424080.0 1549300.0 2029700.0 1653600.0 True False 1627724.0042467497 1562544.680208372 1531877.3332574144 1377746.0985173963 1395700.994829846 1657937.2088069879 1568039.9040814561 1543925.8399093386 1661157.6445732098 1638950.3904813332 0.9931502586656777 0.953381316044275 0.9346697387268242 0.8406270906789158 0.8515822095261537 1.0115847425498208 0.9567342081787772 0.9420210940344037 1.0135496804667496 1.0 20.644340755372436 -6.278651601751201 24.997593979077532 0.9794015291151742 0.9138283277256246 0.35487293465601366 0.04696917435350176 1128.275390727994 1638608.051788578 0.018247439564719307 0.016128847687445314 5.26439415485983e-07 6.278651601751201 -0.06557320138954958 RGLNSSFETS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 RGLNSSFETSPK 12 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QZ79 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 RGLNSSFET(0.02)S(0.98)PK;RGLNSSFET(0.016)S(0.984)PK 86.641 0.0021623000000000002 481300000.0 1383810.0 1187950.0 1105990.0 1026950.0 1173250.0 1141800.0 1034980.0 1148180.0 1433270.0 1191200.0 True False 1307047.3007431556 1130879.098850697 1177283.885046567 1124551.0192362238 1265578.1001206567 1134673.6026707955 1139605.8788314033 1144197.2315672273 1173024.2977964457 1180646.894739576 1.1070602959841442 0.9578470107272365 0.9971515533492759 0.9524871697428844 1.0719361612345701 0.9610609300091192 0.9652385348311738 0.9691273797993696 0.993543711521969 1.0 20.171146120529087 RGMDDDRGPR ddPTM_KYSE-520_SHP099_60min_R1 3 RGMDDDRGPR 10 2 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;; 117.01 0.0024523 175319000.0 311730.0 354460.0 281344.0 217642.0 287960.0 327900.0 203135.0 238729.0 346620.0 235199.0 False True 294437.7154816515 337431.20954469265 299479.88440631586 238326.6302435464 310620.81373172294 325853.4544716711 223669.86820655185 237900.90481876727 283682.5455791333 233115.31984205326 1.2630560517478948 1.4474862045674148 1.284685556527249 1.022355074754521 1.332477050166344 1.3978208497513263 0.9594816349182835 1.020528830880598 1.216919358930772 1.0 17.830684292862827 -6.2050370417801854 0.31401680753754824 0.9941079930063622 1.409960453013542 0.3199843953678225 0.1405937763138184 2.9124024884069213 0.5845855064085016 0.1971642785383742 0.43529014903055363 6.236816382525244e-07 6.2050370417801854 0.4158524600071797 RGNDPLT(ph)SSPGR ddPTM_KYSE-520_SHP099_60min_R1 3 RGNDPLTSSPGR 12 1 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 RGNDPLT(0.896)S(0.026)S(0.078)PGR;RGNDPLT(0.533)S(0.234)S(0.234)PGR;RGNDPLT(0.951)S(0.025)S(0.025)PGR 137.62 4.7462e-05 15133700000.0 4491600.0 4084820.0 4080110.0 3701220.0 4000530.0 4108430.0 3954770.0 3820880.0 4793490.0 3841900.0 True False 4242441.994217388 3888579.1157601816 4343120.419006814 4052982.835987632 4315348.951097973 4082787.764425267 4354556.7464357475 3807626.2590800985 3923113.0500493837 3807863.754952971 1.114126520072876 1.0211970191166169 1.1405661280180057 1.0643718097097958 1.1332729395805994 1.072199014241173 1.1435694727185763 0.9999376301548175 1.0302661288620176 1.0 21.860550429385444 -7.277214881203294 24.9860891751625 1.0113263986478198 1.0961352165971265 0.5436353328197232 0.03706927076095041 637.5094234296092 1009716.0082086778 0.018836062922447033 0.009099591623740669 5.281838511151516e-08 7.277214881203294 0.08480881794930673 RGNDPLTS(ph)S(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 RGNDPLTSSPGR 12 1 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 2 RGNDPLT(0.269)S(0.733)S(0.998)PGR;RGNDPLT(0.054)S(0.951)S(0.996)PGR 126.71 9.9644e-05 907430000.0 1731350.0 1685030.0 1640540.0 1611190.0 1756130.0 1726720.0 1539420.0 1656320.0 2074890.0 1802240.0 True False 1635308.564139344 1604078.629518405 1746291.8333568098 1764317.013178065 1894327.4399871188 1715942.8999857358 1695039.5968913755 1650574.6125079957 1698142.2797204067 1786273.5557215011 0.915486073732318 0.8980027859565413 0.9776172455575864 0.9877081858637449 1.0604912298676297 0.9606271640138804 0.9489249793023583 0.9240323841895007 0.9506619376865282 1.0 20.76852160569692 -4.764790295367253 24.80224728830319 0.9754276256954189 0.9067444156732075 0.3853268837637893 0.035106001379412576 81.54243092971593 603569.2409199508 0.010225415783755914 0.022771973808842536 1.7187381014480088e-05 4.764790295367253 -0.06868321002221134 RGNDPLTS(ph)SPGR ddPTM_KYSE-520_SHP099_60min_R1 2 RGNDPLTSSPGR 12 1 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 RGNDPLT(0.109)S(0.445)S(0.445)PGR;RGNDPLT(0.104)S(0.448)S(0.448)PGR 115.06 0.00016518 5029600000.0 2305700.0 1952460.0 2094130.0 1994860.0 2141450.0 2057570.0 1952040.0 1839160.0 2497930.0 2054420.0 True False 2177798.224701001 1858660.8908977914 2229120.970526467 2184450.894623471 2309969.931816221 2044727.9424131603 2149371.253274509 1832780.3832231702 2044368.8796909712 2036219.4371145722 1.0695302210586168 0.9127998962290673 1.0947351399833636 1.0727973885363506 1.1344405665283146 1.0041785797461227 1.055569559006017 0.9000898183254328 1.0040022418153258 1.0 20.957461613929283 -7.232551914573957 24.479513352712143 0.964034510010755 1.0481194575790747 0.2660487458345755 0.06161925692356038 703.5200267714321 596170.6639371044 0.029421494894090267 0.016982582165940174 5.8539375550075024e-08 7.232551914573957 0.08408494756831963 RGNDPLTSS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 5 RGNDPLTSSPGR 12 1 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 RGNDPLT(0.244)S(0.244)S(0.511)PGR;RGNDPLT(0.007)S(0.006)S(0.987)PGR;RGNDPLT(0.161)S(0.176)S(0.664)PGR;RGNDPLTS(0.003)S(0.997)PGR;RGNDPLT(0.018)S(0.184)S(0.798)PGR 200.05 3.9072e-08 21109740000.0 7128790.0 6581560.0 6498890.0 5811690.0 6441280.0 6442040.0 6222210.0 6276800.0 7889850.0 6245110.0 True False 6733341.807809455 6265371.978477031 6917818.847991661 6364031.270251692 6948172.090130132 6401832.838806588 6851211.709717612 6255027.245816139 6457252.126933013 6189783.184022064 1.0878154545365177 1.012211864649813 1.1176189282120421 1.028150919192036 1.122522693212539 1.034258010091839 1.106858108924222 1.0105406053579535 1.0432113589376406 1.0 22.561457444868 -7.281498767800193 24.9252913082279 1.0201569801129342 1.0708873225773907 0.30857329537655853 0.037512283112112604 1023.2562462883094 1271465.1934699512 0.01865055341917733 0.008983531185172181 5.2299945005757644e-08 7.281498767800193 0.05073034246445651 RGPDRGS(ph)PEYR ddPTM_KYSE-520_SHP099_60min_R1 2 RGPDRGSPEYR 11 2 P49716 P49716 CEBPD CCAAT/enhancer-binding protein delta 1 RGPDRGS(1)PEYR;RGPDRGS(1)PEYR 96.414 0.0015984999999999999 1119790000.0 487990.0 427860.0 424110.0 366720.0 381710.0 378250.0 360090.0 407800.0 586370.0 367310.0 True False 460920.22191605234 407304.9633690467 451448.80919999245 401572.95854161115 411748.40536719025 375889.20144528674 396491.4113397355 406385.4369812356 479899.9891848024 364055.91916285595 1.2660698471156167 1.1187978053087053 1.2400534792514728 1.1030529580868385 1.131003188504675 1.0325040238588659 1.0890948078840874 1.1162720219347513 1.318204055817384 1.0 18.473800540527872 -1.0000000049595181 0.6372475825444767 1.1169314975368594 12.21812445254264 0.19195057665149307 0.08708059146777032 372.4419063894409 2.522200640750437 0.03684290576875157 5814.716335748653 0.09999999885802875 1.0000000049595181 11.10119295500578 RGPEVTSQGVQTS(ph)SPACK ddPTM_KYSE-520_SHP099_60min_R1 4 RGPEVTSQGVQTSSPACK 18 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5;F8WB05;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.032)S(0.484)S(0.484)PACK;RGPEVTSQGVQT(0.003)S(0.58)S(0.417)PACK;RGPEVTSQGVQT(0.016)S(0.492)S(0.492)PACK;RGPEVTSQGVQT(0.002)S(0.557)S(0.442)PACK 186.63 1.3621e-12 4972340000.0 4704910.0 3894090.0 3905040.0 3562100.0 3921240.0 4034700.0 3731440.0 4054720.0 4642770.0 3928610.0 True False 4443919.263294443 3707012.0712517416 4156765.1266849195 3900640.913015587 4229819.27919636 4009517.940704025 4108650.3705449807 4040655.12269876 3799760.0027073827 3893805.5718123266 1.1412791885307392 0.9520280360393947 1.0675327902287122 1.001755439781776 1.0862944235881917 1.0297170381924954 1.0551760468699152 1.0377136321211036 0.9758473895600361 1.0 21.892749417536177 -8.473781743657842 0.006874990594299055 2.1692815516583383e-05 2.03545151154143 0.12910207595140633 0.04950460123531147 11915.297224797381 35.448134682707774 5333.0480730935515 5159.2863107004105 3.3590638286086657e-09 8.473781743657842 2.035429818725913 RGPEVTSQGVQTS(ph)SPACKQEK ddPTM_KYSE-520_SHP099_60min_R1 2 RGPEVTSQGVQTSSPACKQEK 21 2 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5;F8WB05;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQT(0.13)S(0.435)S(0.435)PACKQEK;RGPEVTSQGVQT(0.011)S(0.494)S(0.494)PACKQEK 91.72200000000001 0.0015494999999999999 1328050000.0 359050.0 339230.0 384560.0 267668.0 301191.0 295741.0 235766.0 224082.0 460880.0 281466.0 True False 339132.78075156966 322932.8816053892 409349.35291775555 293107.0862426815 324893.0181576311 293895.17071944603 259599.52813442258 223304.7118431322 377195.8098393369 278972.43021723436 1.2156498062818923 1.1575799133768274 1.467346979767848 1.0506668562712114 1.1646061867283395 1.0534918109670959 0.9305562127851623 0.8004544093093572 1.3520899163606115 1.0 18.089763027479787 -5.817896110695299 1.4840528106142699 1.0107323608441425 1.2576195637592658 0.27027921839471625 0.15951363823219122 0.5018829765638596 2.3007219798797576 0.060099981551430065 0.07852959566212649 1.5209113094438867e-06 5.817896110695299 0.24688720291512323 RGPEVTSQGVQTSS(ph)PACK ddPTM_KYSE-520_SHP099_60min_R1 6 RGPEVTSQGVQTSSPACK 18 1 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5;F8WB05;F8WB06 Q99700;F8WB06 ATXN2 Ataxin-2 1 RGPEVTSQGVQTS(0.032)S(0.968)PACK;RGPEVTSQGVQT(0.001)S(0.016)S(0.983)PACK;RGPEVTSQGVQTS(0.004)S(0.996)PACK;RGPEVTSQGVQT(0.012)S(0.04)S(0.948)PACK;RGPEVTSQGVQT(0.002)S(0.006)S(0.992)PACK;RGPEVTSQGVQT(0.041)S(0.44)S(0.518)PACK 237.73 1.0092e-23 24024890000.0 11458210.0 10055880.0 9520900.0 9061100.0 9244150.0 9541720.0 9289320.0 9700010.0 11554570.0 9508620.0 True False 10822600.249924658 9572780.43061639 10134632.447978621 9922264.219680946 9971612.01298136 9482166.58615869 10228375.120626599 9666362.929309364 9456551.355006289 9424381.024394423 1.1483619159614866 1.015746329211207 1.075363190616525 1.052829272712742 1.0580654567308414 1.006131496765113 1.085310016026632 1.0256761589210566 1.003413521856618 1.0 23.167966437322345 RGPGLYYVDSEGNR ddPTM_KYSE-520_SHP099_60min_R1 2 RGPGLYYVDSEGNR 14 1 P28074;P28074-3 P28074 PSMB5 Proteasome subunit beta type-5 0 ; 151.56 5.6468e-06 1417210000.0 1253240.0 1189880.0 836830.0 813910.0 1145980.0 1126460.0 893270.0 920740.0 1027240.0 951450.0 False True 1183720.278927999 1132716.3787537066 890773.4007753403 891263.7616890359 1236162.1062657323 1119429.3453008793 983570.4490750795 917546.1678423305 840719.1106130877 943020.8932168989 1.2552428980550046 1.2011572457209354 0.9445956152007107 0.9451156046486887 1.3108533598326222 1.1870673845647295 1.042999636752326 0.9729860435141928 0.891516950112492 1.0 19.846930209501014 -7.082723270795729 2.9897430897844663 0.948272902964185 1.1327336598292437 0.3430804295529998 0.11496217191386342 0.35222739153647087 6.074277600066408 0.06697203730319197 0.036186476536421756 8.265644625241085e-08 7.082723270795729 0.1844607568650587 RGPGT(ph)PGPVAR ddPTM_KYSE-520_SHP099_60min_R1 2 RGPGTPGPVAR 11 1 Q8N6S5 Q8N6S5 ARL6IP6 ADP-ribosylation factor-like protein 6-interacting protein 6 1 RGPGT(1)PGPVAR;RGPGT(1)PGPVAR 83.061 0.011261 1195230000.0 227546.0 262060.0 231196.0 240426.0 260700.0 236469.0 288400.0 285070.0 306050.0 231897.0 True False 214923.56977829465 249470.24423992037 246099.26408667926 263276.014753287 281215.60681990656 234993.10925727815 317554.2865127598 284081.15870583785 250479.03489265955 229842.57299313575 0.9350903402247996 1.0853961517711117 1.0707296776303885 1.1454623541877498 1.2235140042062838 1.0224089740950482 1.3816164793901935 1.2359814589889835 1.089785202239883 1.0 17.810286522888298 -3.789277004763657 0.7275703410539147 1.1772689250770105 0.6153507815494871 0.26708919726912084 0.10689347382188247 6.4434170241139 1.6087854926658192 0.04203995400925207 3.4633086051357864 0.00016245122673853575 3.789277004763657 -0.5619181435275235 RGPGYTSGTNSEASNAS(ph)ETES(ph)DHRDELSDWSLAPTEEER ddPTM_KYSE-520_SHP099_60min_R1 2 RGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEER 39 2 A0A087WXC0;R9WNI0;G3V0J0;Q06787-2;Q06787-9;Q06787-7;Q06787 A0A087WXC0 FMR1 Fragile X mental retardation protein 1 2 RGPGY(0.001)T(0.001)S(0.001)GT(0.001)NS(0.001)EAS(0.041)NAS(0.773)ET(0.354)ES(0.825)DHRDELSDWSLAPTEEER;RGPGY(0.002)T(0.006)S(0.007)GT(0.008)NS(0.039)EAS(0.051)NAS(0.835)ET(0.282)ES(0.739)DHRDELS(0.031)DWSLAPTEEER 93.083 0.00042510000000000003 990050000.0 296220.0 260250.0 241742.0 248850.0 220654.0 250360.0 212212.0 271350.0 306230.0 224601.0 True False 279788.08610007 247747.19935678618 257325.076120876 272500.6291805195 238018.21445047783 248797.4103736731 233664.45994953497 270408.75018356607 250626.35143009046 222611.20987693366 1.2568463477411829 1.1129143024457235 1.155939434780186 1.2241100945957135 1.069210371670239 1.1176319939647963 1.0496527110144718 1.2147130880473467 1.1258478473237912 1.0 17.76416671773062 -13.999999999999998 0.08631869996501638 0.58530944200664 1.2599751536009878 0.3791403184293739 0.061154437227070486 273.1906091520857 1.6472081069898339 21.74330619225951 1.6901091883850015 1.0000000000000041e-14 13.999999999999998 0.6746657115943477 RGPLAGLGPGS(ph)T(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RGPLAGLGPGSTPR 14 1 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 2 RGPLAGLGPGS(1)T(1)PR;RGPLAGLGPGS(1)T(1)PR 71.263 0.023833 710960000.0 806870.0 769450.0 745710.0 681020.0 679640.0 707610.0 632360.0 634780.0 857850.0 726280.0 True False 762111.3126445318 732484.4670320038 793779.659778187 745743.9360438703 733123.8013773739 703193.5435153984 696285.1200388669 632578.0963387655 702086.06463868 719845.7242372907 1.058714787049716 1.017557571531184 1.1027080290283486 1.0359774475760344 1.0184457262063367 0.9768670144710021 0.9672699254782858 0.8787689848529847 0.9753285197082641 1.0 19.45732821887127 -6.226058637874118 1.495950828006745 0.9450138401924443 1.0557258165445038 0.6140336602168809 0.035553984199700524 0.24678677051626047 1.1055388020780945 0.0154363895825401 0.014379666288861212 5.942119234807127e-07 6.226058637874118 0.11071197635205954 RGPLSQNGSFGPSPVSGGECS(ph)PPLTVEPPVRPLSATLNR ddPTM_KYSE-520_SHP099_60min_R1 1 RGPLSQNGSFGPSPVSGGECSPPLTVEPPVRPLSATLNR 39 2 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 RGPLSQNGSFGPS(0.005)PVS(0.023)GGECS(0.941)PPLT(0.025)VEPPVRPLS(0.003)AT(0.003)LNR 49.073 0.05796900000000001 684730000.0 103530.0 101010.0 127400.0 100060.0 82689.0 148030.0 99662.0 103730.0 107620.0 89941.0 True False 97786.98451806162 96157.32798089898 135612.40784720727 109569.67231586404 89196.15386394803 147106.0898610595 109736.80756738804 103370.18484076398 88078.92087942496 89144.19271303921 1.096952942664971 1.078671813097635 1.5212702445323856 1.229128549838078 1.0005828887931723 1.6502038482148051 1.2310034364284137 1.1595840592052824 0.9880500142388026 1.0 16.443853196278127 -7.5853041649233175 2.6964497576969175 0.9902198461414197 1.2641226623901065 0.23828442664796978 0.1870182894065354 0.4204361855288935 5.786502259603465 0.15930906532083977 0.05115961832132928 2.5983391383611697e-08 7.5853041649233175 0.27390281624868684 RGPLT(ph)SGSDEENVALPLGDNVLTHNLGIPVLVVCTK ddPTM_KYSE-520_SHP099_60min_R1 1 RGPLTSGSDEENVALPLGDNVLTHNLGIPVLVVCTK 36 1 O43237;O43237-2;B4E2E0 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 RGPLT(0.333)S(0.333)GS(0.333)DEENVALPLGDNVLTHNLGIPVLVVCTK 282.09 1.2715e-53 630230000.0 146820.0 168150.0 147250.0 149380.0 156740.0 141380.0 110510.0 144790.0 155260.0 98657.0 True False 138675.60192158617 160071.8216017045 156741.97060833013 163577.03028726522 169074.5462713931 140497.59497775193 121681.42927366534 144287.75728423987 127068.69778609488 97782.97573398465 1.4181978087765355 1.6370111504601228 1.6029576665240939 1.672857970003604 1.7290795765037341 1.4368308381202366 1.2444030094225773 1.475591801141028 1.2994971448995485 1.0 16.577295689695443 -6.504691914373144 4.491770223294289 1.2972936140536597 1.615425216092656 0.6060097441176521 0.13391279170383558 0.15078102735516627 7.573694894901367 0.04943825445501997 0.04069374233498242 3.128297773875095e-07 6.504691914373144 0.3181316020389964 RGPNYTSGYGTNSELS(ph)NPS(ph)ETESER ddPTM_KYSE-520_SHP099_60min_R1 1 RGPNYTSGYGTNSELSNPSETESER 25 1 B4DXZ6;P51114-3;P51114;E7EU85;E9PFF5;P51114-2 B4DXZ6;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 2 RGPNYTSGYGT(0.002)NS(0.021)ELS(0.836)NPS(0.78)ET(0.34)ES(0.019)ER 63.893 0.02238 455750000.0 270910.0 265060.0 271890.0 276660.0 291010.0 252830.0 271760.0 282400.0 376890.0 239150.0 True False 255882.08225430403 252326.11973682884 289416.464439381 302953.6832191382 313910.83137959696 251251.99418747314 299232.15292200976 281420.42031265533 308456.276623736 237031.31705588478 1.0795285847986695 1.0645265059103477 1.221005173637648 1.278116693532572 1.3243432778360942 1.059994929396758 1.2624161087180725 1.1872710484340976 1.3013313196543197 1.0 17.854718157933295 -4.7617648648529265 24.999895927776024 1.2148420715164874 1.072027500350037 0.21881938593985595 0.09837850614453371 10.634493063481225 817125.577999486 0.02421003540122208 0.0560100307998918 1.73075316769264e-05 4.7617648648529265 -0.14281457116645035 RGPNYTSGYGTNSELSNPS(ph)ETESER ddPTM_KYSE-520_SHP099_60min_R1 11 RGPNYTSGYGTNSELSNPSETESER 25 1 B4DXZ6;P51114-3;P51114;E7EU85;E9PFF5;P51114-2 B4DXZ6;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RGPNYTSGYGTNSELS(0.013)NPS(0.979)ET(0.007)ES(0.001)ER;RGPNYTSGYGTNSELSNPS(0.994)ET(0.006)ESER;RGPNYTSGYGTNSELSNPS(1)ETESER;RGPNYTSGYGTNSELS(0.022)NPS(0.976)ET(0.002)ESER;RGPNYTSGYGTNSELSNPS(0.994)ET(0.006)ESER;RGPNYTSGYGTNSELSNPS(0.999)ET(0.001)ESER;RGPNYTSGYGTNSELS(0.001)NPS(0.997)ET(0.003)ESER;RGPNYTSGYGTNSELSNPS(0.986)ET(0.014)ESER;RGPNYTSGYGTNSELSNPS(1)ETESER;RGPNYTSGYGTNSELS(0.019)NPS(0.891)ET(0.086)ES(0.004)ER;RGPNYTSGYGTNSELSNPS(0.999)ET(0.001)ESER 291.55 7.7826e-49 12666050000.0 4118650.0 3507721.0 3416480.0 3577648.0 3500554.0 3494639.0 3483640.0 3562184.0 4125777.0 3520584.0 True False 3890180.2741747787 3339204.8179634367 3636711.7673612777 3917666.5902609047 3776027.6843722723 3472827.6617304804 3835800.3282500403 3549827.615123992 3376639.899174426 3489394.3647329044 1.1148583013409412 0.9569582766890942 1.0422186165362395 1.1227354035578556 1.0821441458541785 0.9952522698007819 1.0992739505222568 1.017319123055245 0.9676865227106226 1.0 21.734545226728212 -7.512217110835473 7.624057602935556 0.986353564439978 1.0556267512413167 0.2727205437997128 0.04971583704211066 0.18960130746649784 77.65285083278866 0.030463464809963668 0.013013127840418923 3.0745594085115594e-08 7.512217110835473 0.06927318680133865 RGPNYTSGYGTNSELSNPS(ph)ETESERK ddPTM_KYSE-520_SHP099_60min_R1 2 RGPNYTSGYGTNSELSNPSETESERK 26 2 B4DXZ6;P51114-3;P51114;E7EU85;E9PFF5;P51114-2 B4DXZ6;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RGPNYTSGYGTNSELSNPS(0.86)ET(0.136)ES(0.004)ERK;RGPNYTSGYGTNSELS(0.026)NPS(0.95)ET(0.017)ES(0.007)ERK 142.05 1.3158000000000002e-06 438650000.0 197434.0 172690.0 171096.0 166961.0 128558.0 184313.0 154657.0 128425.0 167114.0 151262.0 True False 186481.94244507852 164393.71318702545 182125.1219232791 182828.92324134512 138674.78320503843 183162.63419956423 170291.23886686523 127979.52364962042 136770.31020111722 149921.93636005535 1.2438602847099038 1.0965287480826982 1.2147996907262721 1.2194941426200616 0.9249799367051561 1.221720040752925 1.1358660580389688 0.8536410798634723 0.9122768390120514 1.0 17.193851966211227 -7.249444416704669 22.416617589972716 0.9122192377249684 1.1480488727376221 0.5555676335819779 0.09373725636554087 129.11459556036232 241295.52425132733 0.04403474563819987 0.025094457373563084 5.630611763180325e-08 7.249444416704669 0.23582963501265375 RGPNYTSGYGTNSELSNPSET(ph)ESER ddPTM_KYSE-520_SHP099_60min_R1 1 RGPNYTSGYGTNSELSNPSETESER 25 1 B4DXZ6;P51114-3;P51114;E7EU85;E9PFF5;P51114-2 B4DXZ6;E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RGPNYTSGYGTNSELS(0.008)NPS(0.393)ET(0.552)ES(0.047)ER 88.633 0.0044544 1017500000.0 443940.0 383280.0 302480.0 375490.0 353710.0 373680.0 348800.0 382720.0 407880.0 330240.0 True False 419313.763227551 364866.6534849909 321978.3447851118 411176.45670481457 381544.9646653975 371347.72451044247 384060.1079599543 381392.43364751973 333819.2738180625 327314.33052283205 1.2810736473339392 1.1147286246287322 0.9836976715037289 1.2562128155159789 1.1656836535569362 1.1345293801138316 1.1733678368022566 1.1652176457972574 1.0198736892602285 1.0 18.32031724248288 -7.789757704610069 6.113027233810501 1.0057190825505367 1.1551891804877326 0.37945258896655343 0.0763059593724981 0.1977101694209533 21.843205223098348 0.06951251599849764 0.01932002510133595 1.6227151669907514e-08 7.789757704610069 0.1494700979371959 RGPPPPPR ddPTM_KYSE-520_SHP099_60min_R1 2 RGPPPPPR 8 1 P38159;P38159-2;H3BT71;H0Y6E7 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 0 ; 108.09 0.037567 0.0 337340.0 267090.0 230160.0 246110.0 244650.0 255870.0 209542.0 242360.0 271300.0 188682.0 False True 318627.07772938244 254258.5954897368 244996.48186902076 269500.2204043305 263902.56313191477 254273.02041984245 230724.55029284573 241519.30972724932 222038.75891644694 187010.42427237472 1.7037931386397598 1.3595958432745827 1.3100685847981992 1.4410973155796494 1.41116498804125 1.3596729776384118 1.2337523493171845 1.291475117854843 1.1873068561838809 1.0 17.512759165014437 -1.0000000818712498 0.046115227019817295 0.20759546830443343 3.3212115874583956 0.7479410177240324 0.08707633192267801 307.1741309964519 1.0755200881322575 18.148080546270997 70.28483909356484 0.09999998114844985 1.0000000818712498 3.113616119153962 RGPPPRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 RGPPPRSPR 9 2 Q01130-2 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 RGPPPRS(1)PR;RGPPPRS(1)PR;RGPPPRS(1)PR;RGPPPRS(1)PR;RGPPPRS(1)PR 101.56 0.0017096 2903290000.0 679808.0 552151.0 355399.0 651159.0 319127.0 479103.0 432482.0 654425.0 388182.0 259517.0 True False 642097.695076349 525624.8371644518 378308.58819850517 713044.9555819086 344240.47931575123 476112.7404627657 476201.50117757096 652154.9524189425 317697.93407189165 257217.88128117108 2.4963182648039015 2.0435003762039337 1.4707709522922587 2.7721438028737277 1.3383225054227612 1.851009494718275 1.8513545745951603 2.535418413255866 1.23513160317423 1.0 17.97263141391046 -10.808579242216226 0.22687996128726134 3.637407040736289e-15 2.1473408661648823 0.3083662696645474 0.47633953460957595 37.09528686150228 1.354256881569102 21.259348676540768 0.9408665686871229 1.5538917387933995e-11 10.808579242216226 2.1473408661648787 RGPS(ph)VTR ddPTM_KYSE-520_SHP099_60min_R1 2 RGPSVTR 7 1 P51788-4;P51788-5;P51788-3;P51788 P51788-4 CLCN2 Chloride channel protein 2 1 RGPS(0.993)VT(0.007)R;RGPS(0.991)VT(0.009)R 61.56 0.025692000000000003 867340000.0 295030.0 272010.0 236600.0 253560.0 257800.0 253510.0 240600.0 313490.0 328540.0 246500.0 True False 278664.0977722759 258942.23130466597 251851.61457338507 277658.2661644061 278087.39331864956 251927.75005523994 264922.1960297163 312402.57635911636 268885.41781942314 244316.2017740978 1.140587876484496 1.0598651641780672 1.030842869791561 1.136470950956979 1.1382273926138458 1.0311544966149238 1.0843414972318186 1.278681373116521 1.1005631876515614 1.0 17.89839001321226 RGQAALDR ddPTM_KYSE-520_SHP099_60min_R1 8 RGQAALDR 8 1 M0QYS1;P40429;Q8J015 M0QYS1 RPL13A;RPL13a 60S ribosomal protein L13a 0 ;;;;;;; 113.74 0.0025416999999999996 10760845000.0 2959650.0 2891200.0 1990162.0 1821582.0 2732130.0 2890850.0 1877998.0 2622940.0 2506560.0 2344550.0 False True 2795472.3145839954 2752302.412220322 2118451.026891788 1994704.6056014001 2947133.087306755 2872807.1328436397 2067844.365334225 2613841.6333388 2051431.8892355633 2323779.1110322974 1.202985387600871 1.1844079323863363 0.9116404467336415 0.8583882160448926 1.2682500988648373 1.2362651506783906 0.8898627049003904 1.1248236206829691 0.8827998666036082 1.0 21.14804150787565 -4.645240281854441 8.94438017568281 1.0320460783646062 1.197893816397788 0.19365037717406297 0.13940284328458838 0.4502532971799259 32.88926327104199 0.03700747710838285 0.0983105968251042 2.263391695707078e-05 4.645240281854441 0.16584773803318176 RGQS(ph)PLPR ddPTM_KYSE-520_SHP099_60min_R1 1 RGQSPLPR 8 1 H3BTS1;H3BN52;Q9BQ65-3;Q9BQ65-2;Q9BQ65 H3BTS1 USB1 U6 snRNA phosphodiesterase 1 RGQS(1)PLPR 71.223 0.017943999999999998 960530000.0 196400.0 148240.0 165540.0 164690.0 183340.0 197310.0 183090.0 182210.0 218610.0 200280.0 True False 185505.3004863065 141118.32788722377 176210.97327336506 180342.08808414612 197767.81493809613 196078.51510157192 201598.52398620418 181577.95603813362 178915.93470963652 198505.67501548206 0.9345088016845785 0.7109032418152152 0.8876873331687964 0.9084983997061076 0.9962829270380891 0.9877728437047412 1.0155806576838717 0.9147242567446588 0.9013139533450735 1.0 17.59882072714338 -5.2799420342731125 2.316853068099192 0.9667363455097987 0.8223701242377716 0.440702468018467 0.0630626595611488 0.26034558514368966 2.7364142235850113 0.018568200289595483 0.03429218152502635 5.2487751151088235e-06 5.2799420342731125 -0.14436622127202714 RGQS(ph)SPPPAPPICLR ddPTM_KYSE-520_SHP099_60min_R1 3 RGQSSPPPAPPICLR 15 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 RGQS(0.605)S(0.395)PPPAPPICLR;RGQS(0.62)S(0.38)PPPAPPICLR;RGQS(0.767)S(0.233)PPPAPPICLR 119.48 8.5715e-05 7617400000.0 3893900.0 3564040.0 3290360.0 2989810.0 2999280.0 3283940.0 2631430.0 3031280.0 4268030.0 3199360.0 True False 3677897.604702795 3392818.1686668913 3502461.8703621384 3273960.643480846 3235306.2724311803 3263443.712344304 2897440.6246819426 3020765.197186068 3493063.340280734 3171016.1594644166 1.159848269371163 1.0699466663203434 1.104523501057687 1.0324641940751942 1.020274293707044 1.0291476133302009 0.9137262249623223 0.9526174088296901 1.1015596151584137 1.0 21.59651379874315 -5.103064382696453 0.8262692579420412 0.9908617280429887 1.1494462432535204 0.5022283944324708 0.04935300928919393 0.8123575242825688 0.8964601652578392 0.021902872152641386 0.09532983827879708 7.887431804269625e-06 5.103064382696453 0.15858451521053174 RGQSS(ph)PPPAPPICLR ddPTM_KYSE-520_SHP099_60min_R1 1 RGQSSPPPAPPICLR 15 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 RGQS(0.154)S(0.846)PPPAPPICLR 169.25 2.2196e-08 2772200000.0 2212100.0 1970900.0 1765500.0 1751400.0 1614100.0 1755600.0 1451200.0 1659000.0 2372500.0 1744200.0 True False 2089390.4032879788 1876215.0056187888 1879306.9548998754 1917852.5294223905 1741120.487027277 1744642.6491932466 1597901.4583471469 1653245.3162135095 1941713.8058579783 1728747.7449670658 1.2086149696338628 1.0853029373898229 1.0870914859447456 1.1093883043410289 1.0071570546346233 1.009194461292838 0.9243115214461717 0.956325363851743 1.1231909406742102 1.0 20.72129593880438 -4.23580239850553 0.553135689080928 0.9938197383499775 1.323700917769879 0.5412275276430274 0.05553532546827519 3.2741306637367433 0.7501906745289351 0.0322332196421004 0.7046796568622666 5.8102872211907124e-05 4.23580239850553 0.3298811794199016 RGRS(ph)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK ddPTM_KYSE-520_SHP099_60min_R1 1 RGRSPQPPAEEDEDDFDDTLVAIDTYNCDLHFK 33 2 M0R3F1;A0A0A0MRA5;B7Z4B8;Q9BUJ2-3;Q9BUJ2-4;Q9BUJ2-2;Q9BUJ2;M0R0K8;M0QYI8;M0QYZ0 M0R3F1 HNRNPUL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1 1 RGRS(1)PQPPAEEDEDDFDDTLVAIDTYNCDLHFK 188.48 1.5772e-15 92265000.0 95159.0 119380.0 144090.0 83790.0 85300.0 66670.0 58781.0 70993.0 153810.0 65259.0 True False 89880.34057523642 113644.80560696672 153378.27195215132 91753.37640761801 92012.62470939015 66253.88780001922 64723.1571272765 70746.74185289069 125881.98123456944 64680.85603073376 1.3895972640270695 1.7570083728169468 2.3713086276915085 1.4185553815803005 1.4225634964643854 1.0243198971970626 1.0006539971660646 1.0937817801804395 1.9462015341101135 1.0 15.981051152101315 -5.494121347746342 13.540174723241066 1.2464364743728213 1.841770304273685 0.36718348575108983 0.34735100141599445 2.895956178558454 1361.803127720668 0.1001933997790187 0.14673334160091583 3.205373574681875e-06 5.494121347746342 0.5953338299008637 RGRS(ph)PS(ph)PKPR ddPTM_KYSE-520_SHP099_60min_R1 3 RGRSPSPKPR 10 3 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGRS(1)PS(1)PKPR;RGRS(1)PS(1)PKPR;RGRS(1)PS(1)PKPR 68.809 0.052642999999999995 27387300000.0 2348030.0 2239120.0 1023380.0 2336130.0 1440180.0 2000760.0 1569300.0 2134530.0 1461810.0 963270.0 True False 2217780.09521824 2131549.3142123614 1089348.7122658943 2558155.0928169056 1553513.972496714 1988272.5146957596 1727940.1588920732 2127125.813633046 1196382.1532312988 954736.1772127204 2.3229245399424165 2.2326055774227154 1.140994484409468 2.679436637967616 1.627165712974321 2.0825360577624386 1.8098614047879311 2.2279723596973438 1.253102356217448 1.0 19.864742601920348 -7.88392747588094 4.805253323268345 1.0138448695799855 1.9965446529133253 0.4448703049549313 0.4002743911673953 0.17491803273584736 6.047791721351626 0.36157725042762767 0.09472245916309073 1.3063890276821248e-08 7.88392747588094 0.9826997833333397 RGS(ph)ASGSEPAGDSDR ddPTM_KYSE-520_SHP099_60min_R1 9 RGSASGSEPAGDSDR 15 1 P50747;A0A0C4DG27 P50747 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase 1 RGS(0.985)AS(0.014)GS(0.001)EPAGDSDR;RGS(1)ASGSEPAGDSDR;RGS(1)ASGSEPAGDSDR;RGS(0.906)AS(0.091)GS(0.003)EPAGDSDR;RGS(1)ASGSEPAGDSDR;RGS(0.998)AS(0.002)GSEPAGDSDR;RGS(0.929)AS(0.07)GS(0.001)EPAGDSDR;RGS(0.786)AS(0.173)GS(0.041)EPAGDSDR;RGS(0.858)AS(0.116)GS(0.026)EPAGDSDR 191.97 2.7335999999999997e-11 2226036000.0 1410195.0 1369630.0 1314136.1 1178028.0 1281622.0 1333356.0 1254405.0 1315877.0 1693465.0 1383171.0 True False 1331968.6721959615 1303830.9189434568 1398847.415698104 1289987.4269329668 1382478.3599683244 1325034.0306207053 1381212.4992130338 1311312.529815002 1385974.4447786256 1370917.1810307545 0.971589451665119 0.951064686462783 1.020373393122369 0.9409667081151184 1.0084331709439058 0.9665310559638979 1.0075098031629734 0.9565220627179409 1.0109833503848498 1.0 20.38670998790652 -1.0000000124365112 0.11746938761054151 1.0059316367310913 0.8876400103578092 0.10092155136539349 0.02614688840190572 243.51663406269026 1.9784201074398056 0.18061574726581678 4.701656663243283 0.09999999713638752 1.0000000124365112 -0.11829162637328217 RGS(ph)CVTQVGLLESVYEMFR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSCVTQVGLLESVYEMFR 19 1 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 1 RGS(0.927)CVT(0.073)QVGLLESVYEMFR 95.954 0.00036032 35723000.0 39513.0 49412.0 49908.0 47515.0 42342.0 46778.0 39673.0 34597.0 43101.0 27839.0 True False 37321.13512278733 47038.1733510759 53125.14953562335 52030.81131409432 45674.07450697538 46486.041150581936 43683.53401116758 34476.99108200051 35274.9448877913 27592.368118414277 1.35258905515545 1.7047530371155097 1.9253566532467832 1.8856957507525638 1.6553154956095975 1.684742714039054 1.58317451491286 1.2495118553811861 1.2784312218656548 1.0 14.75198166103508 -7.413541427616287 1.0696693367865382 1.043170030887082 1.73195407174456 0.7109542243163416 0.1530252049388692 0.2837993661204087 0.579800027150853 0.14593718381477996 0.054097481971386106 3.8588559997558766e-08 7.413541427616287 0.6887840408574781 RGS(ph)DAS(ph)DFDISEIQSVCSDVETVPQTHRPTPR ddPTM_KYSE-520_SHP099_60min_R1 4 RGSDASDFDISEIQSVCSDVETVPQTHRPTPR 32 2 Q03001;F8W9J4;Q03001-14;F6QMI7;E9PHM6;Q03001-8;A0A0U1RQJ2;H0YC65;A0A494C073;A0A494C1U5 Q03001 DST Dystonin 2 RGS(1)DAS(1)DFDISEIQSVCSDVETVPQTHRPTPR;RGS(1)DAS(1)DFDISEIQSVCSDVETVPQTHRPTPR;RGS(1)DAS(1)DFDISEIQSVCSDVETVPQTHRPTPR;RGS(1)DAS(1)DFDISEIQSVCSDVETVPQTHRPTPR 295.23 6.0921e-54 4460310000.0 142289.0 123942.0 161612.0 159315.0 161510.0 124718.0 129286.0 167431.0 189768.0 146730.0 True False 134395.94552391063 117987.64027926525 172029.76810834277 174456.2497001988 174219.9181338055 123939.58870020679 142355.49058976682 166850.22093968937 155310.9148619839 145430.08635421272 0.9241275233556068 0.8113014523823631 1.182903568449676 1.199588435059368 1.197963382277527 0.8522279798303688 0.9788585990593628 1.1472881927148506 1.0679421208875943 1.0 17.149966237118573 -4.753826347086512 24.999699943241414 1.0805801253607938 0.8677144374056772 0.374743844736776 0.10879873124749222 190.73935699274497 626335.7823337658 0.030181679778460677 0.07668829390406696 1.7626807144801e-05 4.753826347086512 -0.21286568795511662 RGS(ph)DASDFDISEIQSVCS(ph)DVETVPQTHRPTPR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSDASDFDISEIQSVCSDVETVPQTHRPTPR 32 2 Q03001;F8W9J4;Q03001-14;F6QMI7;E9PHM6;Q03001-8;A0A0U1RQJ2;H0YC65;A0A494C073;A0A494C1U5 Q03001 DST Dystonin 2 RGS(0.976)DAS(0.024)DFDISEIQS(0.269)VCS(0.692)DVET(0.028)VPQT(0.005)HRPT(0.005)PR 81.433 0.004353 99154000.0 23076.0 31844.0 29644.0 21400.0 31190.0 28180.0 22875.0 25645.0 50431.0 13889.0 True False 21795.92827913447 30314.16644118152 31554.89967207703 23433.84956585539 33644.47555317563 28004.118167159762 25187.428238486093 25556.043480588003 41274.0016620543 13765.954265478484 1.5833212764474398 2.202111517775542 2.292242082425677 1.7023047668131175 2.4440351104134805 2.0343027172033383 1.8296899548511334 1.856467266107085 2.998266655989045 1.0 13.748817001568286 -10.461876284840733 5.934717821907151 0.9992996342569165 2.0938052194019487 0.4168204388732172 0.3918305877426768 0.003462560323675286 0.00031396239095238715 0.36178744967008925 0.08769829486866704 3.4524207260240856e-11 10.461876284840733 1.0945055851450323 RGS(ph)DASDFDISEIQSVCSDVETVPQTHRPTPR ddPTM_KYSE-520_SHP099_60min_R1 8 RGSDASDFDISEIQSVCSDVETVPQTHRPTPR 32 2 Q03001;F8W9J4;Q03001-14;F6QMI7;E9PHM6;Q03001-8;A0A0U1RQJ2;H0YC65;A0A494C073;A0A494C1U5 Q03001 DST Dystonin 1 RGS(1)DASDFDISEIQSVCSDVETVPQTHRPTPR;RGS(1)DASDFDISEIQSVCSDVETVPQTHRPTPR;RGS(0.5)DAS(0.5)DFDISEIQSVCSDVETVPQTHRPTPR;RGS(1)DASDFDISEIQSVCSDVETVPQTHRPTPR;RGS(0.497)DAS(0.497)DFDIS(0.006)EIQSVCSDVETVPQTHRPTPR;RGS(0.921)DAS(0.079)DFDISEIQSVCSDVETVPQTHRPTPR;RGS(0.981)DAS(0.019)DFDISEIQSVCSDVETVPQTHRPTPR;RGS(0.988)DAS(0.012)DFDISEIQSVCSDVETVPQTHRPTPR 308.43 2.6216999999999993e-67 9889970000.0 268843.0 198954.0 270951.0 251074.4 240447.0 232192.0 275320.0 187379.8 282512.0 194870.0 True False 253929.74286476648 189395.9512039579 288416.9349969279 274936.43548772903 259368.81094371318 230742.80360075083 303152.03246426216 186729.82320857397 231214.9423479661 193143.60340656585 1.3147199202359618 0.9805965502532374 1.4932771777577971 1.4234819618074013 1.3428806668670448 1.1946696630436109 1.5695680680976496 0.966792686452624 1.1971141589465968 1.0 17.559314373148577 -7.28456926137458 24.994239495058064 1.0614650525608627 1.322788025284415 0.3764282704636177 0.16285757357367153 943.2976949269714 1019325.3720811883 0.08886448399191915 0.04273087262388243 5.1931484646248835e-08 7.28456926137458 0.2613229727235524 RGS(ph)DASDFDLLETQSACSDTSESSAAGGQGNSR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSDASDFDLLETQSACSDTSESSAAGGQGNSR 33 1 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5;H0Y4F5;H0Y6T5;H0Y314 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 RGS(0.991)DAS(0.009)DFDLLETQSACSDTSESSAAGGQGNSR 129.34 3.7555e-05 377650000.0 84400.0 78360.0 85198.0 53548.0 68904.0 96338.0 54744.0 66132.0 92684.0 64159.0 True False 79718.16375277119 74595.46797924206 90689.99940161969 58637.18582020674 74326.35278986901 95736.71880723345 60278.05776995335 65902.60352732486 75854.92197350513 63590.60117494666 1.2536155073208906 1.1730580714910914 1.426154144259759 0.9221045993713382 1.1688260751834503 1.5055168065458024 0.9479082860707664 1.0363576111824695 1.1928637341360808 1.0 15.956525927444035 -7.380954125524911 0.3499800274489091 0.9900993035999708 1.253799560908485 0.13468432248458562 0.17220620335175302 2.752789873327617 1.0587300082479185 0.258524005758341 0.23113036813786994 4.1595454540331286e-08 7.380954125524911 0.2637002573085143 RGS(ph)DELFSTCVTNGPFIMSSNSASAANGNDSK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSDELFSTCVTNGPFIMSSNSASAANGNDSK 32 1 P26599;P26599-2;P26599-3;A0A0U1RRM4;K7EKX4;K7EKJ7 P26599 PTBP1 Polypyrimidine tract-binding protein 1 1 RGS(1)DELFSTCVTNGPFIMSSNSASAANGNDSK 246.96 1.7664999999999998e-31 695960000.0 527720.0 569750.0 436170.0 499670.0 459440.0 483630.0 471410.0 489080.0 585770.0 482300.0 True False 498446.31961626053 542378.3547878152 464286.2160966755 547158.4865687365 495595.3141439891 480611.48577656044 519064.723318239 487383.4956321306 479408.93406003347 478027.1972237221 1.0427153988541409 1.1346181931443036 0.9712548131009046 1.1446178998737182 1.0367512916049522 1.0054061538085015 1.0858476804936077 1.019572732394198 1.0028904983740177 1.0 18.866733176708884 -7.231527007067179 0.5609219219525328 0.9954081576139228 1.0706163585984154 0.1765963518157262 0.05063976007582503 1.4069753992003626 0.9570063092446199 0.047817462379776236 0.029216001342974442 5.867768791359336e-08 7.231527007067179 0.07520820098449266 RGS(ph)DELFSTCVTNGPFIMSSNSASAANGNDSKK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSDELFSTCVTNGPFIMSSNSASAANGNDSKK 33 2 P26599;P26599-2;P26599-3;A0A0U1RRM4;K7EKX4;K7EKJ7 P26599 PTBP1 Polypyrimidine tract-binding protein 1 1 RGS(0.891)DELFS(0.04)T(0.04)CVT(0.029)NGPFIMSSNSASAANGNDSKK 55.691 0.036797 429860000.0 106970.0 120900.0 108250.0 109570.0 85967.0 88215.0 89745.0 75140.0 135820.0 74999.0 True False 101036.16086059176 115091.78252540033 115227.96820612386 119983.49985657829 92732.11381467934 87664.41746330728 98817.30042679481 74879.35687780789 111158.51174357475 74334.567208339 1.3592083018041345 1.5482942438183607 1.550126307767046 1.6141010079509592 1.2474965187431195 1.1793223631424186 1.3293586569198361 1.0073288873525288 1.4953811654277684 1.0 16.18174563126811 -5.828452699331948 6.6293469603331605 1.2122375791309254 1.5218661615196367 0.5101013430924086 0.1480573226819118 0.16699264000093303 13.003937007269743 0.04322303463457671 0.0494098836336127 1.484387541568164e-06 5.828452699331948 0.30962858238871127 RGS(ph)DIDNPTLTVMDISPPSR ddPTM_KYSE-520_SHP099_60min_R1 3 RGSDIDNPTLTVMDISPPSR 20 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 RGS(1)DIDNPTLTVMDISPPSR;RGS(0.989)DIDNPT(0.004)LT(0.008)VMDISPPSR;RGS(1)DIDNPTLTVMDISPPSR 186.56 7.507800000000001e-13 1108810000.0 531870.0 486390.0 417720.0 516470.0 469580.0 477510.0 480910.0 544820.0 558830.0 493060.0 True False 502366.1108434408 463023.0943137261 444646.89957563113 565555.1535176329 506533.2744552808 474529.68296665873 529525.0760293041 542930.1465819435 457360.55895789905 488691.871994875 1.0279813101714719 0.947474514817758 0.909871690234075 1.15728373219918 1.0365084902836135 0.9710202075381258 1.0835561350094591 1.1109866517027671 0.935887386649016 1.0 18.89856558407521 -5.229648642009327 24.998785216547105 1.045325015834985 0.960345715285992 0.2298801356481448 0.06724997816877319 957.0706058213509 752595.7128506983 0.018072774482702454 0.03129859550247531 5.8932024128296896e-06 5.229648642009327 -0.08497930054899294 RGS(ph)DPASGEVEASQLR ddPTM_KYSE-520_SHP099_60min_R1 9 RGSDPASGEVEASQLR 16 1 Q8WWA1-3;Q8WWA1-2;Q8WWA1 Q8WWA1-3 TMEM40 Transmembrane protein 40 1 RGS(1)DPASGEVEASQLR;RGS(0.999)DPAS(0.001)GEVEASQLR;RGS(1)DPASGEVEASQLR;RGS(0.923)DPAS(0.077)GEVEASQLR;RGS(0.998)DPAS(0.002)GEVEASQLR;RGS(0.616)DPAS(0.367)GEVEAS(0.017)QLR;RGS(0.876)DPAS(0.112)GEVEAS(0.012)QLR;RGS(1)DPASGEVEASQLR;RGS(1)DPASGEVEASQLR 245.74 2.7468000000000002e-27 12727100000.0 7716570.0 7516680.0 6930240.0 7836700.0 7991870.0 7638700.0 7336060.0 8579620.0 10228580.0 6661030.0 True False 7288516.479499074 7155567.410033293 7376974.359176053 8581497.61181022 8620784.701479886 7591024.039868112 8077660.537846054 8549859.300718356 8371327.713518568 6602018.4564029295 1.1039830511879816 1.0838454114125518 1.1173816625764712 1.2998293883119192 1.3057801577514627 1.1498035169086813 1.2235137770649491 1.2950371704014738 1.2679952000739538 1.0 22.65447574104484 -5.1309733485551225 6.003113802063153 1.2330309378221087 1.0957674500950167 0.27258744580614247 0.08742987186028467 0.26345880719130443 11.69967186239512 0.02282656896514012 0.04020200454337618 7.396506639703114e-06 5.1309733485551225 -0.13726348772709196 RGS(ph)DPASGEVEASQLRR ddPTM_KYSE-520_SHP099_60min_R1 4 RGSDPASGEVEASQLRR 17 2 Q8WWA1-3;Q8WWA1-2;Q8WWA1 Q8WWA1-3 TMEM40 Transmembrane protein 40 1 RGS(1)DPASGEVEASQLRR;RGS(0.995)DPAS(0.005)GEVEASQLRR;RGS(0.998)DPAS(0.002)GEVEASQLRR;RGS(0.893)DPAS(0.073)GEVEAS(0.035)QLRR 142.23 6.5924e-06 3525200000.0 1414000.0 1889567.0 1562297.0 1784071.3 1709593.4 1565619.3 1336286.8 1421070.6 2772330.0 1247610.0 True False 1335562.6012608833 1798789.3650221091 1663005.1643835835 1953628.8999514042 1844128.6743241544 1555847.689211709 1471371.7106463937 1416141.2377689718 2268944.7567520556 1236557.1460258937 1.0800654102830411 1.4546754841077454 1.3448672143687241 1.579893744684643 1.4913412455307085 1.2582092903768876 1.1898938236499286 1.14522910835155 1.8348887182805085 1.0 20.23789748303755 -6.282488309816587 23.89908552511124 1.2887366069802164 1.4017758907286182 0.045161243950430974 0.23711383516381807 1667.8301680012412 1893656.7143809965 0.08209399778314198 0.07248991111621701 5.218091499218845e-07 6.282488309816587 0.11303928374840178 RGS(ph)EDFETR ddPTM_KYSE-520_SHP099_60min_R1 2 RGSEDFETR 9 1 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 RGS(1)EDFETR;RGS(0.756)EDFET(0.244)R 66.267 0.01991 42827000.0 109174.0 94049.0 104842.0 84112.0 97447.0 104639.0 98507.0 117073.0 137060.0 103068.0 True False 103117.90058702664 89530.74486957288 111600.28307313111 92105.97919080517 105115.52450241441 103985.90918713369 108465.04889567441 116666.90108804364 112173.35900143081 102154.89770569073 1.00942688899861 0.8764214627037447 1.0924614049798438 0.9016305753265341 1.028981741093347 1.0179238736719027 1.061770422482956 1.1420588117484307 1.0980712772539145 1.0 16.64039884861393 -6.514092282191028 1.540629763205567 1.0901579582181953 0.9741122464882586 0.3106717567948212 0.06596719604989054 0.4175179857595649 2.0048055623623937 0.03133633441275171 0.023268749354944673 3.0613128735577254e-07 6.514092282191028 -0.11604571172993672 RGS(ph)FCR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSFCR 6 1 Q6P0Q8;Q6P0Q8-2;O15021 Q6P0Q8;O15021 MAST2;MAST4 Microtubule-associated serine/threonine-protein kinase 2;Microtubule-associated serine/threonine-protein kinase 4 1 RGS(1)FCR 53.968 0.052088 189290000.0 93699.0 98930.0 115770.0 69968.0 86178.0 88391.0 76729.0 86197.0 90631.0 68592.0 True False 88501.32968567433 94177.25430304259 123232.71943854929 76617.73768335371 92959.71831425357 87839.3189820233 84485.51612287652 85898.00272553103 74174.69502158686 67984.32824376848 1.3017901621141112 1.385278883176653 1.8126636332520494 1.1269911707979048 1.3673698147157076 1.2920524663722737 1.2427204666925653 1.2634971168286058 1.0910557909114265 1.0 16.052914593989236 -7.207045942366977 0.4227661747009963 0.9911516480528023 1.465758527246579 0.4186176550977072 0.16022072609042506 1.060514377629692 0.4910025835646176 0.18455321567552194 0.15481445371857291 6.208033583223005e-08 7.207045942366977 0.47460687919377664 RGS(ph)FDATGSGFSMTFSSSSYSSSGYGR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSFDATGSGFSMTFSSSSYSSSGYGR 27 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 RGS(0.792)FDAT(0.085)GS(0.085)GFS(0.032)MT(0.004)FS(0.001)SSSYSSSGYGR 40.208 0.062297000000000005 0.0 24756.0 17624.0 30464.0 22612.0 18750.0 17597.0 14226.0 14460.0 26752.0 18395.0 True False 23382.73533013749 16777.316585836674 32427.758184123384 24761.0376814543 20225.518327093392 17487.170595724274 15664.102912380471 14409.841634989376 21894.511163040133 18232.03461109344 1.2825082789120015 0.9202108784736712 1.7786143387635098 1.3581061142999493 1.1093396188918487 0.9591453158543288 0.8591527630629612 0.7903583962166012 1.2008813953061621 1.0 14.1541879480326 -5.973688324080935 3.0924779052171276 0.9450222389924421 1.3353034452253345 0.39313409971513247 0.21757938070184563 0.26884665736296426 5.298024233381606 0.07544260786307443 0.08329997533365097 1.0624577674487593e-06 5.973688324080935 0.3902812062328924 RGS(ph)FSSENYWR ddPTM_KYSE-520_SHP099_60min_R1 8 RGSFSSENYWR 11 1 Q6P6C2-3;Q6P6C2;K7ER58;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 RGS(0.914)FS(0.043)S(0.043)ENYWR;RGS(0.749)FS(0.242)S(0.009)ENYWR;RGS(0.997)FS(0.003)SENYWR;RGS(1)FSSENYWR;RGS(0.999)FS(0.001)SENYWR;RGS(1)FSSENYWR;RGS(0.801)FS(0.1)S(0.1)ENYWR;RGS(0.957)FS(0.022)S(0.022)ENYWR 222.75 3.9457e-10 11361650000.0 4351817.0 4224444.0 4048697.0 4093863.0 4362878.0 4743859.0 4411339.0 4718192.0 5702750.0 4736005.0 True False 4110413.03587789 4021495.3692202833 4309682.486764246 4482942.508655203 4706211.677219874 4714250.816335848 4857280.196639775 4701825.6931862915 4667274.354628705 4694047.680256136 0.8756649518425004 0.8567223094335603 0.9181164701184039 0.9550270500044401 1.0025913662988346 1.0043039903843944 1.0347743626615085 1.001656994870945 0.994296324313014 1.0 22.162401065578038 -5.270995981470575 1.3758769965227389 1.0093858298266218 0.8621563898904079 0.9469752827653473 0.013278277527685277 0.0897913095931193 0.32799754326342734 0.00450817680239634 0.010774380524883572 5.358016152659383e-06 5.270995981470575 -0.14722943993621396 RGS(ph)GDTSISIDTEASIR ddPTM_KYSE-520_SHP099_60min_R1 76 RGSGDTSISIDTEASIR 17 1 Q32MZ4-2;Q32MZ4;Q32MZ4-4;Q32MZ4-3 Q32MZ4-2;Q32MZ4-3 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 RGS(0.999)GDT(0.001)SISIDTEASIR;RGS(0.998)GDT(0.002)SISIDTEASIR;RGS(0.999)GDT(0.001)SISIDTEASIR;RGS(0.913)GDT(0.082)S(0.005)ISIDTEASIR;RGS(0.952)GDT(0.044)S(0.004)ISIDTEASIR;RGS(0.999)GDT(0.001)SISIDTEASIR;RGS(0.996)GDT(0.004)SISIDTEASIR;RGS(0.997)GDT(0.002)S(0.001)ISIDTEASIR;RGS(0.954)GDT(0.044)S(0.002)ISIDTEASIR;RGS(0.781)GDT(0.175)S(0.041)IS(0.002)IDTEASIR;RGS(0.981)GDT(0.019)SISIDTEASIR;RGS(0.998)GDT(0.002)SISIDTEASIR;RGS(0.941)GDT(0.056)S(0.004)ISIDTEASIR;RGS(0.979)GDT(0.021)SISIDTEASIR;RGS(0.997)GDT(0.003)SISIDTEASIR;RGS(0.998)GDT(0.002)SISIDTEASIR;RGS(0.999)GDT(0.001)SISIDTEASIR;RGS(0.931)GDT(0.068)S(0.001)ISIDTEASIR;RGS(1)GDTSISIDTEASIR;RGS(0.947)GDT(0.047)S(0.006)ISIDTEASIR;RGS(0.953)GDT(0.036)S(0.01)IS(0.001)IDTEASIR;RGS(0.951)GDT(0.04)S(0.009)ISIDTEASIR;RGS(0.95)GDT(0.044)S(0.005)IS(0.001)IDTEASIR;RGS(0.963)GDT(0.016)S(0.021)ISIDTEASIR;RGS(0.809)GDT(0.178)S(0.012)ISIDTEASIR;RGS(0.993)GDT(0.007)S(0.001)ISIDTEASIR;RGS(0.712)GDT(0.27)S(0.018)IS(0.001)IDTEASIR;RGS(0.942)GDT(0.056)S(0.001)ISIDTEASIR;RGS(0.983)GDT(0.016)S(0.001)ISIDTEASIR;RGS(0.999)GDT(0.001)SISIDTEASIR;RGS(0.869)GDT(0.119)S(0.01)IS(0.001)IDTEASIR;RGS(0.994)GDT(0.006)SISIDTEASIR;RGS(0.999)GDT(0.001)SISIDTEASIR;RGS(0.999)GDT(0.001)SISIDTEASIR;RGS(0.812)GDT(0.174)S(0.013)IS(0.001)IDTEASIR;RGS(0.989)GDT(0.01)S(0.001)ISIDTEASIR;RGS(0.947)GDT(0.05)S(0.003)ISIDTEASIR;RGS(0.997)GDT(0.003)SISIDTEASIR;RGS(0.997)GDT(0.003)SISIDTEASIR;RGS(0.988)GDT(0.012)SISIDTEASIR;RGS(0.997)GDT(0.003)SISIDTEASIR;RGS(0.989)GDT(0.01)S(0.001)ISIDTEASIR;RGS(0.8)GDT(0.188)S(0.011)ISIDTEASIR;RGS(0.991)GDT(0.007)S(0.002)ISIDTEASIR;RGS(1)GDTSISIDTEASIR;RGS(0.999)GDT(0.001)SISIDTEASIR;RGS(0.992)GDT(0.008)SISIDTEASIR;RGS(0.95)GDT(0.049)S(0.001)ISIDTEASIR;RGS(0.963)GDT(0.036)S(0.001)ISIDTEASIR;RGS(0.956)GDT(0.041)S(0.002)ISIDTEASIR;RGS(0.999)GDT(0.001)SISIDTEASIR;RGS(0.995)GDT(0.005)SISIDTEASIR;RGS(0.955)GDT(0.044)SISIDTEASIR;RGS(0.956)GDT(0.044)SISIDTEASIR;RGS(1)GDTSISIDTEASIR;RGS(0.967)GDT(0.026)S(0.008)ISIDTEASIR;RGS(0.996)GDT(0.003)SISIDTEASIR;RGS(0.999)GDT(0.001)SISIDTEASIR;RGS(0.995)GDT(0.005)SISIDTEASIR;RGS(0.995)GDT(0.005)SISIDTEASIR;RGS(0.985)GDT(0.015)SISIDTEASIR;RGS(0.991)GDT(0.009)SISIDTEASIR;RGS(0.857)GDT(0.143)S(0.001)ISIDTEASIR;RGS(0.766)GDT(0.223)S(0.01)ISIDTEASIR;RGS(0.937)GDT(0.06)S(0.003)ISIDTEASIR;RGS(0.928)GDT(0.069)S(0.003)ISIDTEASIR;RGS(0.86)GDT(0.06)S(0.068)IS(0.012)IDTEASIR;RGS(0.819)GDT(0.174)S(0.006)ISIDTEASIR;RGS(0.997)GDT(0.003)SISIDTEASIR;RGS(0.995)GDT(0.005)SISIDTEASIR;RGS(0.995)GDT(0.003)S(0.001)ISIDTEASIR;RGS(0.98)GDT(0.02)SISIDTEASIR;RGS(0.938)GDT(0.047)S(0.012)IS(0.003)IDTEASIR;RGS(0.994)GDT(0.005)SISIDTEASIR;RGS(0.976)GDT(0.024)S(0.001)ISIDTEASIR;RGS(0.992)GDT(0.008)SISIDTEASIR 236.5 2.2386e-23 4491907000.0 2398320.6 2413121.0 2292214.4000000004 2083751.4000000001 2156557.5999999996 1918258.2999999998 1922730.8 2171266.7 2659470.9 2063398.0999999996 True False 2265280.9753844133 2297191.044991534 2439974.2078967146 2281790.506553298 2326266.413985736 1906285.7384079113 2117099.19330828 2163735.082595155 2176578.0243656673 2045117.9981334282 1.1076529459189772 1.123255991628929 1.193072580713519 1.115725600496343 1.1374729556479926 0.9321152814398834 1.035196597575567 1.0580001176313485 1.064279922406542 1.0 20.96375265474585 -6.222905866576432 23.968251961089205 1.0226232834540498 1.1368664122377707 0.6759535376778943 0.04061219385343132 213.11738881081607 132561.0552844112 0.013821489359490976 0.01382115791395441 5.985413149618199e-07 6.222905866576432 0.1142431287837209 RGS(ph)GDTSSLIDPDT(ph)SLSELRDIYDLK ddPTM_KYSE-520_SHP099_60min_R1 2 RGSGDTSSLIDPDTSLSELRDIYDLK 26 2 C9JSU1;Q9Y608-4;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 2 RGS(0.997)GDT(0.002)S(0.001)SLIDPDT(0.544)S(0.454)LS(0.002)ELRDIYDLK;RGS(0.749)GDT(0.073)S(0.083)S(0.095)LIDPDT(0.492)S(0.431)LS(0.076)ELRDIYDLK 170.44 1.107e-09 132392000.0 200315.0 202217.0 189865.0 167630.0 175646.0 169598.0 150906.0 219860.0 280720.0 184121.0 True False 189203.12763194754 192502.19178609495 202104.00169474081 183561.5048002026 189468.3409109676 168539.47597281635 166161.05118063308 219097.3569757099 229748.3243753221 182489.83118397024 1.0367872357841657 1.0548653069443148 1.107480895694387 1.0058725114121674 1.0382405402083048 0.9235554380173087 0.9105222471992102 1.20060035978024 1.2589650770387857 1.0 17.47745654988596 -7.2794837710121625 24.819512010771213 1.1723370605418555 1.0139225827258436 0.3760795833597199 0.08274634468495964 764.1258729441897 1051025.804475607 0.04609252592550801 0.02221667444872789 5.254316494017402e-08 7.2794837710121625 -0.15841447781601192 RGS(ph)GDTSSLIDPDTS(ph)LSELRDIYDLK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSGDTSSLIDPDTSLSELRDIYDLK 26 2 C9JSU1;Q9Y608-4;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 2 RGS(0.708)GDT(0.075)S(0.102)S(0.115)LIDPDT(0.188)S(0.784)LS(0.028)ELRDIYDLK 108.52 0.00042172 80594000.0 72140.0 69832.0 70198.0 60243.0 64618.0 65639.0 50329.0 64277.0 104870.0 68630.0 True False 68138.25039247538 66477.16590003105 74723.07540077122 65968.47660728157 69703.06897387307 65229.32265344917 55416.7464837056 64054.03808936459 85828.25155756641 68021.99159333197 1.0017091354783974 0.977289319863837 1.0985134902768143 0.9698110134979978 1.0247137336200238 0.9589446166678166 0.8146886791409085 0.941666607945123 1.2617721055668112 1.0 16.05371362640321 -7.735721797197221 24.999969802806707 1.130886303110986 0.9735323267183724 0.3321188897459779 0.08932168200481413 223.5916257858421 217353.65866528207 0.06138917321781614 0.02318489602329088 1.8377151803058036e-08 7.735721797197221 -0.1573539763926135 RGS(ph)GDTSSLIDPDTSLSELR ddPTM_KYSE-520_SHP099_60min_R1 10 RGSGDTSSLIDPDTSLSELR 20 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 RGS(0.998)GDT(0.002)SSLIDPDTSLSELR;RGS(0.969)GDT(0.03)S(0.001)SLIDPDTSLSELR;RGS(0.987)GDT(0.013)SSLIDPDTSLSELR;RGS(0.98)GDT(0.019)SSLIDPDTSLSELR;RGS(0.961)GDT(0.038)S(0.001)SLIDPDTSLSELR;RGS(0.967)GDT(0.023)S(0.006)S(0.004)LIDPDTSLSELR;RGS(0.915)GDT(0.076)S(0.006)S(0.002)LIDPDTSLSELR;RGS(0.999)GDT(0.001)SSLIDPDTSLSELR;RGS(0.982)GDT(0.017)S(0.001)SLIDPDTSLSELR;RGS(0.902)GDT(0.033)S(0.033)S(0.033)LIDPDTSLSELR 181.51 2.8633e-12 44652700000.0 12595590.0 11764570.0 11052050.0 10486350.0 11278040.0 10955880.0 11326950.0 11366210.0 13841570.0 10993840.0 True False 11896887.514013842 11199382.398220407 11764482.826905241 11482969.551163921 12165557.584730266 10887500.289042655 12471988.646379009 11326783.270403357 11328289.805584686 10896443.130678095 1.091813848917274 1.0278016655443656 1.0796626647628937 1.0538273281888202 1.116470525182578 0.999179287999929 1.1445926433796627 1.039493634258841 1.0396318936122155 1.0 23.377353944611766 -7.914752491175959 2.0359723028560723 1.0023553608393436 1.0702016693502705 0.2347707783363291 0.04003681812699845 0.4228969173421586 3.8313661982192966 0.035267045927781 0.00994765350603007 1.2168793149110702e-08 7.914752491175959 0.06784630851092688 RGS(ph)GDTSSLIDPDTSLSELRDIYDLK ddPTM_KYSE-520_SHP099_60min_R1 4 RGSGDTSSLIDPDTSLSELRDIYDLK 26 2 C9JSU1;Q9Y608-4;Q9Y608 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 RGS(0.946)GDT(0.04)S(0.012)S(0.002)LIDPDTSLSELRDIYDLK;RGS(0.987)GDT(0.013)SSLIDPDTSLSELRDIYDLK;RGS(0.737)GDT(0.245)S(0.001)S(0.017)LIDPDTSLSELRDIYDLK;RGS(0.495)GDT(0.305)S(0.08)S(0.12)LIDPDTSLSELRDIYDLK 251.33 1.1105e-29 2530509000.0 2284146.0 2997631.0 3081571.0 1837180.0 1884038.0 1788438.0 1271771.0 1371799.0 3842450.0 1542621.0 True False 2157439.868047835 2853620.307224139 3280213.9973479304 2011785.034831692 2032301.0718901542 1777275.6950546068 1400334.023968862 1367040.5494492948 3144757.9402819825 1528954.5780809782 1.41105556631753 1.8663865808268651 2.145396628763814 1.315791236490965 1.3292095795552907 1.1624123571318263 0.9158767984634635 0.8941014789105737 2.0568027234851094 1.0 20.544114117323947 -5.412772886250311 6.015087934035486 1.2124543502177185 1.811057709995897 0.355215477494383 0.35208496032299796 0.25105843860218563 11.810359117624891 0.09998334518870416 0.14887734667357538 3.865690800158904e-06 5.412772886250311 0.5986033597781786 RGS(ph)GEPTPQK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSGEPTPQK 10 1 Q9H6A9-2;Q9H6A9 Q9H6A9-2 PCNXL3 Pecanex-like protein 3 1 RGS(0.999)GEPT(0.001)PQK 66.98899999999999 0.019545 0.0 232690.0 282420.0 238230.0 323660.0 299580.0 265460.0 256500.0 325340.0 439430.0 193180.0 True False 219782.22184398497 268852.11927893746 253586.68698147708 354420.5490880731 323155.24162296724 263803.1656726128 282429.5231987619 324211.47147492657 359640.5891288397 191468.57549176586 1.1478762051657754 1.4041579334280863 1.324429799146767 1.851063800823624 1.6877716920020882 1.3777883132783724 1.4750698514018445 1.6932881578202859 1.8783269693480649 1.0 17.546748105739315 -5.080773598208117 12.34876896672601 1.5885656484671336 1.2980405415152472 0.20207002870426127 0.24722544905787655 1.538092969792841 232.41451867402606 0.0653395344942711 0.11323406113110318 8.30283489293835e-06 5.080773598208117 -0.2905251069518864 RGS(ph)GPEIFTFDPLPEPAAAPAGRPSASR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSGPEIFTFDPLPEPAAAPAGRPSASR 28 2 Q5ST79;P46695 Q5ST79 IER3 Radiation-inducible immediate-early gene IEX-1 1 RGS(1)GPEIFTFDPLPEPAAAPAGRPSASR 164.65 2.9079e-10 417670000.0 57688.0 53821.0 45780.0 34938.0 47222.0 64506.0 58488.0 66526.0 74213.0 73995.0 True False 54487.93164182306 51235.358373032024 48731.05205058983 38258.497015507266 50938.10274357357 64103.39412671421 64400.537827872125 66295.23683328519 60737.78995748712 73339.4618672389 0.7429551602172729 0.6986055947039763 0.6644588167118558 0.5216631816137927 0.6945524475729467 0.8740641462948817 0.8781157672584473 0.9039504128526964 0.8281733791207294 1.0 16.162302059775275 -6.238982667602565 3.969812174706964 0.8920433592227515 0.6552008754206481 0.7560508865018858 0.06625443115019422 0.11611960846427798 4.203890757484903 0.023931532385640254 0.022823184293221933 5.767894822089096e-07 6.238982667602565 -0.23684248380210338 RGS(ph)GSALGGPLDPQFVGPSDTSLGAAPGHR ddPTM_KYSE-520_SHP099_60min_R1 3 RGSGSALGGPLDPQFVGPSDTSLGAAPGHR 30 1 P98174 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 1 RGS(0.818)GS(0.182)ALGGPLDPQFVGPSDTSLGAAPGHR;RGS(0.5)GS(0.5)ALGGPLDPQFVGPSDTSLGAAPGHR;RGS(0.5)GS(0.5)ALGGPLDPQFVGPSDTSLGAAPGHR 160.78 3.5636e-10 1701730000.0 241310.0 326117.0 283867.0 504750.0 252683.0 266627.0 247911.0 263248.0 385400.0 275926.0 True False 227924.05326044123 310449.8498084035 302165.52102325915 552721.2882413793 272567.7145303968 264962.8819927359 272972.26325819985 262334.85413054505 315421.0751433784 273481.51030717965 0.8334166832866785 1.1351767417830196 1.1048846435134174 2.021055418410379 0.99665865609797 0.968851172772611 0.9981379104992956 0.9592416461203741 1.1533542972945097 1.0 18.0610837722084 RGS(ph)GSQPQEPENKK ddPTM_KYSE-520_SHP099_60min_R1 4 RGSGSQPQEPENKK 14 2 P23497;P23497-3;P23497-4 P23497 SP100 Nuclear autoantigen Sp-100 1 RGS(0.975)GS(0.025)QPQEPENKK;RGS(0.933)GS(0.067)QPQEPENKK;RGS(0.5)GS(0.5)QPQEPENKK;RGS(0.917)GS(0.083)QPQEPENKK 142.94 3.1589e-06 3049500000.0 2011780.0 1936880.0 1873190.0 1883610.0 1844680.0 2002340.0 1731930.0 1846070.0 2427620.0 2010220.0 True False 1900182.5530159972 1843829.3774838476 1993938.8246099711 2062627.7280720056 1989845.8212065399 1989842.65332969 1907010.3864079216 1839666.4140459758 1986825.4033201071 1992411.0147274963 0.9537101225451149 0.9254262116875667 1.0007668146136421 1.0352420824947672 0.9987125178981671 0.9987109279266068 0.957137042664234 0.9233368017178868 0.9971965566511621 1.0 20.9260838611795 -4.761983237767959 24.999998277651823 0.9873731304077796 0.9395681602283938 0.3156323308125347 0.028980609570023352 18.499341734861968 850566.8564363926 0.008457734687314311 0.0194994749596372 1.7298831253012034e-05 4.761983237767959 -0.047804970179385786 RGS(ph)HPYIDFR ddPTM_KYSE-520_SHP099_60min_R1 7 RGSHPYIDFR 10 1 Q13946-3;Q13946-2;Q13946;E5RG23 Q13946-3 PDE7A High affinity cAMP-specific 3,5-cyclic phosphodiesterase 7A 1 RGS(0.999)HPY(0.001)IDFR;RGS(1)HPYIDFR;RGS(1)HPYIDFR;RGS(1)HPYIDFR;RGS(1)HPYIDFR;RGS(1)HPYIDFR;RGS(0.996)HPY(0.004)IDFR 119.88 0.00034249 11730290000.0 18953620.0 16525630.0 15090080.0 12905920.0 14044620.0 15142110.0 12592970.0 12872850.0 15767790.0 13980220.0 True False 17902224.915495265 15731713.929323643 16062810.701781671 14132494.756493676 15149851.691043342 15047602.474809473 13865990.303143531 12828197.08789579 12904756.809639383 13856366.127246572 1.2919855574754977 1.1353419637483069 1.1592368846400818 1.0199279253096623 1.0933495515287601 1.0859703284846454 1.0006945670898544 0.9257980750574255 0.9313233131350374 1.0 23.724045620273948 -1.0000000004517957 0.27126295210933293 0.9447259334467936 3.343188594276144 0.8038988396451244 0.04732904658591421 22.638037174862674 0.3165818756084533 0.058042498446262684 25.46464458646786 0.09999999989597019 1.0000000004517957 2.3984626608293502 RGS(ph)IDSPK ddPTM_KYSE-520_SHP099_60min_R1 3 RGSIDSPK 8 1 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 RGS(1)IDSPK;RGS(1)IDSPK;RGS(1)IDSPK 85.81299999999999 0.0033469000000000003 1822350000.0 2338300.0 2129780.0 2026150.0 1962900.0 2145660.0 1710820.0 1515020.0 1452330.0 1764380.0 1591350.0 True False 2208589.837714515 2027462.1719350442 2156758.870954621 2149453.425832593 2314511.2348645963 1700142.1377835416 1668173.0067703256 1447292.2062063697 1444013.068400296 1577251.8770515665 1.4002771972242882 1.2854396951012528 1.3674156311586423 1.3627838756170452 1.4674328612568999 1.0779141635651117 1.0576452823050193 0.917603730427548 0.915524710675672 1.0 20.588981637034582 -6.450118671870058 3.042168016608775 0.9686987902477596 1.370013202008146 0.9122257083531589 0.05977790794535672 0.075712667066853 1.3705032492728655 0.024494230362957864 0.020379122629686896 3.5471644898249265e-07 6.450118671870058 0.4013144117603863 RGS(ph)IGENQGEEK ddPTM_KYSE-520_SHP099_60min_R1 10 RGSIGENQGEEK 12 1 E7EX44;Q05682-3;Q05682-6;Q05682-2 E7EX44 CALD1 Caldesmon 1 RGS(1)IGENQGEEK;RGS(1)IGENQGEEK;RGS(1)IGENQGEEK;RGS(1)IGENQGEEK;RGS(1)IGENQGEEK;RGS(1)IGENQGEEK;RGS(1)IGENQGEEK;RGS(1)IGENQGEEK;RGS(1)IGENQGEEK;RGS(1)IGENQGEEK 241.14 2.5538000000000002e-15 10791510000.0 12776417.0 11650047.0 11122991.0 11023250.0 11721046.0 11438544.0 11233654.0 10943586.0 13052686.0 11105071.0 True False 12067683.679854147 11090361.255042942 11839996.797274858 12070896.365739051 12643425.636570906 11367151.803983554 12369261.376217807 10905625.254418164 10682647.25383737 11006688.710554508 1.0963954734435464 1.0076019724631804 1.075709244499781 1.096687358311865 1.1487038444584066 1.0327494583437606 1.1237949669964504 0.9908179963298651 0.9705595874255615 1.0 23.39187717313366 -7.315248104563264 9.24694733651902 0.9851956175250353 1.0809903284658118 0.5609484299765553 0.03886574376655186 0.38119095335944825 62.988193562318244 0.021535823007971286 0.010333408625777292 4.8389584768201144e-08 7.315248104563264 0.09579471094077652 RGS(ph)IGENQIK ddPTM_KYSE-520_SHP099_60min_R1 14 RGSIGENQIK 10 1 Q05682-5;Q05682-4;E9PGZ1;C9J813 Q05682-5 CALD1 Caldesmon 1 RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK;RGS(1)IGENQIK 198.1 1.1657e-06 27250920000.0 28566570.0 23636420.0 22948420.0 24627810.0 26169980.0 25021250.0 26040400.0 27810320.0 26259880.0 26010580.0 True False 26981925.416054502 22500890.904210262 24427711.87197021 26968429.65777895 28229408.539182242 24865083.09758856 28672817.761813045 27713852.4908975 21491747.74970449 25780146.49712503 1.046616450339547 0.872799187030203 0.9475396842564242 1.046092956096523 1.0950057456938949 0.964505112504364 1.112205385062905 1.0750075642117904 0.8336549892026884 1.0 24.61975712612969 -5.251552889119411 23.02001645347648 1.0260891264131065 0.9473664891586566 0.09477046747917972 0.08477834434981374 455.88564729099966 1061489.1934514495 0.022652051473062325 0.03853992141344398 5.603341747617038e-06 5.251552889119411 -0.07872263725444983 RGS(ph)IGENQIKDEK ddPTM_KYSE-520_SHP099_60min_R1 13 RGSIGENQIKDEK 13 2 Q05682-5;Q05682-4;E9PGZ1;C9J813 Q05682-5 CALD1 Caldesmon 1 RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK;RGS(1)IGENQIKDEK 258.9 3.107e-22 198352350000.0 45983290.0 40735740.0 39335700.0 38615000.0 39572660.0 38018340.0 39866750.0 38512410.0 49417970.0 37064130.0 True False 43432505.23828396 38778733.904807694 41871342.16134529 42284957.98997693 42686803.204364546 37781053.43787287 43896870.15198539 38378819.43857402 40444912.373646185 36735770.64365675 1.18229465388345 1.0556123697789828 1.1397975713509445 1.1510567833229426 1.1619955824102297 1.0284540864639955 1.1949353282334139 1.0447261284064278 1.1009681208533433 1.0 25.13068220403453 -8.350861142386968 0.561447929534616 0.9962968691176863 1.1299304457230488 0.3395217574207763 0.05366660432711652 1.632257713152754 1.0325516770758827 0.06447767523081188 0.023959358692809723 4.4579876150658494e-09 8.350861142386968 0.13363357660536246 RGS(ph)IGENQVEVMVEEK ddPTM_KYSE-520_SHP099_60min_R1 5 RGSIGENQVEVMVEEK 16 1 Q05682 Q05682 CALD1 Caldesmon 1 RGS(1)IGENQVEVMVEEK;RGS(1)IGENQVEVMVEEK;RGS(1)IGENQVEVMVEEK;RGS(1)IGENQVEVMVEEK;RGS(1)IGENQVEVMVEEK 223.81 2.3309e-18 3639080000.0 4289160.0 4385610.0 3892290.0 3670510.0 3665950.0 3601540.0 3684890.0 3793380.0 4933570.0 3887890.0 True False 4051231.7445715154 4174918.7126651844 4143193.24128419 4019354.1668209317 3954439.4085977576 3579061.45293657 4057394.6422607675 3780221.650161546 4037758.0531788277 3853446.3193326457 1.0513268925653863 1.0834246455490295 1.0751916331357443 1.0430544073381613 1.0262085107448966 0.9287949425895741 1.052926213583129 0.980997615354408 1.0478303623749718 1.0 21.877717862873393 -5.678172793888083 2.52694672199397 1.0025567415794703 1.0701257987183967 0.42682903797211447 0.03378381562659986 0.2576608961097138 3.350799407791794 0.010514022909955886 0.014032515096996635 2.098104939001829e-06 5.678172793888083 0.06756905713892647 RGS(ph)ISS(ph)MSSVSSVLDEKDDDRIR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSISSMSSVSSVLDEKDDDRIR 23 3 Q9H1K0 Q9H1K0 RBSN Rabenosyn-5 2 RGS(0.98)IS(0.028)S(0.957)MS(0.029)S(0.003)VS(0.001)S(0.002)VLDEKDDDRIR 119.35 0.00035611 447510000.0 233560.0 229020.0 225600.0 198210.0 181880.0 191980.0 174940.0 216150.0 298230.0 178850.0 True False 220603.9612096829 218017.53543397188 240142.5369727624 217047.81880599048 196192.92124435978 190781.7816086348 192624.64244986928 215400.22609978917 244078.94976650208 177265.52814319447 1.2444831407462358 1.229892454092135 1.3547052237859585 1.2244220355728723 1.1067742459542151 1.0762486288621325 1.0866446763087958 1.2151275454175705 1.3769115310977775 1.0 17.435552484942214 -5.558380614775039 6.152018367351654 1.1489950304643612 1.2747287882860434 0.26821241349184677 0.09941771788132708 0.26567671854582786 28.19231355826673 0.030650806554172537 0.040285389970571926 2.764517765840821e-06 5.558380614775039 0.12573375782168217 RGS(ph)ISSMSSVSSVLDEKDDDRIR ddPTM_KYSE-520_SHP099_60min_R1 3 RGSISSMSSVSSVLDEKDDDRIR 23 3 Q9H1K0 Q9H1K0 RBSN Rabenosyn-5 1 RGS(0.985)IS(0.008)S(0.008)MSSVSSVLDEKDDDRIR;RGS(0.997)IS(0.002)S(0.001)MSSVSSVLDEKDDDRIR;RGS(0.919)IS(0.057)S(0.011)MS(0.011)S(0.002)VSSVLDEKDDDRIR 267.38 2.146e-37 4722210000.0 705700.0 684910.0 660020.0 574230.0 694660.0 581090.0 627050.0 607700.0 852200.0 532120.0 True False 666553.4142219269 652005.8955291308 702565.9452693387 628804.6465514547 749325.7899252633 577463.2017656089 690438.3334182609 605592.0305382456 697461.9622137705 527405.8307830952 1.2638339876376121 1.2362508290077656 1.3321163784370087 1.19225956531008 1.4207764612929288 1.0949124337669687 1.3091215400351075 1.1482467488822774 1.3224388535450489 1.0 19.008553995573596 -12.940146001215759 0.2944168573595301 2.883854909556778e-11 1.271260586293756 0.41667681477636387 0.09102136639761033 118.43827986331625 1.9948457681278835 71.90187208018774 0.08814376135638287 1.1477676998296611e-13 12.940146001215759 1.2712605862649176 RGS(ph)LCATCGLPVTGR ddPTM_KYSE-520_SHP099_60min_R1 9 RGSLCATCGLPVTGR 15 1 O43294-2;O43294 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 RGS(1)LCATCGLPVTGR;RGS(1)LCATCGLPVTGR;RGS(0.943)LCAT(0.056)CGLPVT(0.001)GR;RGS(1)LCATCGLPVTGR;RGS(1)LCATCGLPVTGR;RGS(1)LCATCGLPVTGR;RGS(0.998)LCAT(0.002)CGLPVTGR;RGS(0.998)LCAT(0.002)CGLPVTGR;RGS(1)LCATCGLPVTGR 208.28 3.4968e-14 27664980000.0 9242950.0 9274400.0 8801550.0 8153970.0 9313610.0 8790620.0 8575600.0 8628230.0 10534020.0 9098550.0 True False 8730225.138135985 8828843.90284179 9368911.995977918 8928920.857219525 10046538.119808005 8735754.479865078 9442505.337790651 8598300.68397403 8621307.509034397 9017943.925564777 0.9680948573418 0.9790306943263517 1.03891885703771 0.9901282299956553 1.1140608327944121 0.9687080061676003 1.0470796243279241 0.9534657517218409 0.9560169790581683 1.0 23.104367108512168 -1.1729717469497736 5.997310659293027 1.003830652583739 1.0040557728492827 0.0 0.048376889585073496 0.0 0.0 0.011026445963390873 0.0 0.06714725341859117 1.1729717469497736 0.0002251202655436657 RGS(ph)LCSGCQKPITGR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSLCSGCQKPITGR 15 2 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 RGS(0.845)LCS(0.155)GCQKPITGR 83.89399999999999 0.003182 381270000.0 159910.0 153200.0 123960.0 153580.0 191560.0 171910.0 179140.0 192220.0 157520.0 129950.0 True False 151039.473527318 145840.04204211172 131950.6599430126 168176.1970244892 206634.6821726936 170837.0459232235 197249.21943791927 191553.23368448528 128918.33875605866 128798.74409957031 1.172678154458976 1.132309503960437 1.0244716349175396 1.3057285472789812 1.6043221820000881 1.3263875134617358 1.5314529719748822 1.4872290488826616 1.000928538995659 1.0 16.97475900041919 -5.405211855245537 5.639479895145308 1.3675193649487702 1.1144036232317822 0.18014638040550301 0.19514168134542287 0.3150679631344409 13.358450686540396 0.05405491291748267 0.08064882556166025 3.9335814274948735e-06 5.405211855245537 -0.25311574171698803 RGS(ph)LEK ddPTM_KYSE-520_SHP099_60min_R1 3 RGSLEK 6 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 RGS(1)LEK;RGS(1)LEK;RGS(1)LEK 66.568 0.030621 994750000.0 1409610.0 1704190.0 1025500.0 1134290.0 1589910.0 1761150.0 1983980.0 1028420.0 1472470.0 2837500.0 True False 1331416.1233121296 1622318.1543586613 1091605.3708580143 1242092.5805632772 1715026.8716495496 1750158.0095845764 2184540.060178871 1024852.6510550336 1205106.5659480288 2812361.9575415943 0.47341563547388377 0.5768525456007799 0.38814540494362015 0.4416545947197506 0.6098172630484334 0.6223089474281128 0.7767634796512717 0.3644099395907421 0.42850336625996177 1.0 21.42335085389999 -5.7691652629250845 24.03037661115103 0.6084446076043319 0.47180017508818944 0.17111647739983227 0.17109010476508602 233.49865859566344 726266.0861530288 0.052588054187709926 0.0608017928058249 1.7015109059269448e-06 5.7691652629250845 -0.1366444325161425 RGS(ph)LEMSSDGEPLSR ddPTM_KYSE-520_SHP099_60min_R1 5 RGSLEMSSDGEPLSR 15 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 RGS(1)LEMSSDGEPLSR;RGS(1)LEMSSDGEPLSR;RGS(1)LEMSSDGEPLSR;RGS(0.685)LEMS(0.225)S(0.09)DGEPLSR;RGS(0.943)LEMS(0.007)S(0.004)DGEPLS(0.046)R 210.61 3.1579e-14 1696140000.0 2200180.0 1955210.0 2012410.0 1798730.0 1968070.0 2096800.0 1772790.0 2052790.0 2386950.0 1934800.0 True False 2078131.6294499093 1861278.7767699556 2142133.1685698465 1969680.7583921072 2122945.9122134773 2083713.0934315322 1952000.9139630925 2045669.3506147864 1953540.0501128368 1917659.1772516228 1.0836814247817876 0.9705993634580723 1.1170562496094527 1.027127646954993 1.1070506883585383 1.0865919857656337 1.0179081544410242 1.0667533495428667 1.0187107663795807 1.0 20.87091490439285 -7.938935594895206 1.3661975034395684 0.9989417406877052 1.0601094713231405 0.1833246230316007 0.04223279126894364 0.7425616413401355 3.1101376766835283 0.03863333233888109 0.011777887057924017 1.1509710632650838e-08 7.938935594895206 0.061167730635435236 RGS(ph)LLGSMK ddPTM_KYSE-520_SHP099_60min_R1 2 RGSLLGSMK 9 1 Q9HDC5 Q9HDC5 JPH1 Junctophilin-1 1 RGS(1)LLGSMK;RGS(1)LLGSMK 96.756 0.0032209000000000005 838500000.0 1141360.0 1182780.0 822710.0 1121380.0 1136250.0 1077710.0 1095520.0 1150040.0 1180730.0 986830.0 True False 1078046.4855552474 1125957.4734110264 875743.2029825421 1227955.6180448097 1225666.4106218608 1070983.6121337744 1206265.8528448641 1146050.7796613546 966339.1957811144 978087.4539421236 1.1021984600765964 1.1511828199747594 0.8953628834036373 1.2554660762650693 1.253125582668385 1.0949773538319487 1.2332903852135932 1.171726285867654 0.9879885401722939 1.0 19.899603941381024 -3.9863045629435985 14.217549898769278 1.1260795322615025 1.0648337559377683 0.0 0.11672713187015689 3607803.848081429 74932123.27608883 0.029077519075065242 4326015.852688839 0.00010320374025752678 3.9863045629435985 -0.06124577632373418 RGS(ph)LPAGASWQNTDLFEMIEK ddPTM_KYSE-520_SHP099_60min_R1 2 RGSLPAGASWQNTDLFEMIEK 21 1 J3KPC5;P47736-3 J3KPC5 RAP1GAP Rap1 GTPase-activating protein 1 1 RGS(1)LPAGASWQNTDLFEMIEK;RGS(0.999)LPAGAS(0.001)WQNTDLFEMIEK 135.36 2.2215e-07 56912000.0 168231.0 172136.0 156307.0 163048.0 166574.0 150323.0 141010.0 163894.0 203472.0 146506.0 True False 158898.89106981587 163866.32817859636 166382.79932004266 178544.03289783135 179682.42612358704 149384.7783975144 155264.66692498024 163325.489967147 166526.61391171135 145208.0708199431 1.0942841549547841 1.128493252842601 1.145823358030533 1.229573755023745 1.2374134929896003 1.0287636049014823 1.069256454191911 1.1247686787993305 1.146813761600091 1.0 17.147762116532984 -6.268620661554265 24.998380751772736 1.081427041387793 1.1672585785072758 0.40263288524678476 0.0563899190593756 695.2573595280684 2420217.8918883204 0.02116112055831104 0.019081261321405328 5.387401445204267e-07 6.268620661554265 0.08583153711948266 RGS(ph)LPDQK ddPTM_KYSE-520_SHP099_60min_R1 8 RGSLPDQK 8 1 X6RKU3;Q6P3S6 X6RKU3 FBXO42 F-box only protein 42 1 RGS(1)LPDQK;RGS(1)LPDQK;RGS(1)LPDQK;RGS(1)LPDQK;RGS(1)LPDQK;RGS(1)LPDQK;RGS(1)LPDQK;RGS(1)LPDQK 127.87 0.00054745 15715320000.0 17808400.0 15174310.0 13743480.0 13094470.0 13967700.0 13679860.0 13358940.0 13580160.0 16147370.0 13720480.0 True False 16820532.551834725 14445313.370496338 14629406.7111455 14338964.49180405 15066878.524658265 13594478.919453574 14709392.025890335 13533053.594593156 13215414.650072502 13598927.221571902 1.2369014318388591 1.062239185130855 1.0757765280145741 1.0544187977606228 1.1079461106871549 0.9996728931594493 1.0816582651135092 0.9951559688565543 0.9717983216432664 1.0 23.69698951030752 -1.0000000000000002 0.5755713645839553 1.0227939087205975 11.15716121643921 0.6829013189120177 0.04120752816743995 94.64079508144903 0.7987227097963009 0.019679593255428878 1196.6467830146012 0.09999999999999995 1.0000000000000002 10.134367307718612 RGS(ph)LPDTGWK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSLPDTGWK 10 1 O75096 O75096 LRP4 Low-density lipoprotein receptor-related protein 4 1 RGS(0.997)LPDT(0.003)GWK 81.709 0.0091572 277570000.0 501000.0 518120.0 509570.0 523680.0 558710.0 527080.0 517560.0 578710.0 680430.0 525230.0 True False 473208.53128126095 493228.7374860248 542417.6975408267 573450.389749867 602677.2983749519 523790.2982096014 569880.0156988354 576702.590081929 556881.0642444445 520576.8708227568 0.9090079828813148 0.9474657156905395 1.0419550462999847 1.1015671688285826 1.1577104788048647 1.0061728201288809 1.0947086734724814 1.1078144696871897 1.0697383911127476 1.0 18.989751688809314 -4.774666389673826 2.5576806548546367 1.082259226204163 0.9142156667332693 0.637083657296248 0.04445779878209833 0.16530880026834457 2.1322184075343262 0.011910951629944507 0.03765808926450908 1.680094114005693e-05 4.774666389673826 -0.16804355947089378 RGS(ph)LPDTQPSQGPSTPK ddPTM_KYSE-520_SHP099_60min_R1 2 RGSLPDTQPSQGPSTPK 17 1 Q86Y91;A0A494BYR6;Q86Y91-6 Q86Y91 KIF18B Kinesin-like protein KIF18B 1 RGS(1)LPDTQPSQGPSTPK;RGS(0.999)LPDTQPSQGPSTPK 203.06 4.6898e-13 1007400000.0 1139430.0 893990.0 809060.0 713320.0 691610.0 932770.0 1038580.0 1054770.0 1182060.0 1030940.0 True False 1076223.5465026072 851041.3784936533 861213.3021417708 781113.7183325224 746035.7722773894 926948.2364365369 1143569.801964018 1051111.2490551695 967427.7013076863 1021806.6736591838 1.053255546519922 0.8328790567064861 0.8428338983710947 0.7644437430960226 0.7301144056984543 0.9071659642983637 1.1191645459397805 1.0286791779222222 0.9467815451265733 1.0 19.96269083278508 -6.552398202639623 8.015645537907865 1.0248242772163332 0.8373716486000163 0.47346998546948516 0.0889448957976394 0.1904414212275023 43.23656432942402 0.035151005267641214 0.02738847165850723 2.802862527480062e-07 6.552398202639623 -0.18745262861631684 RGS(ph)LQAYTFEEQPTLPVLLPTSSGLPPGWEEKQDER ddPTM_KYSE-520_SHP099_60min_R1 5 RGSLQAYTFEEQPTLPVLLPTSSGLPPGWEEKQDER 36 2 H0Y8X6;P46934-4;P46934-3;P46934-2;P46934 H0Y8X6 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 RGS(0.79)LQAY(0.17)T(0.039)FEEQPT(0.001)LPVLLPTSSGLPPGWEEKQDER;RGS(0.962)LQAYT(0.038)FEEQPTLPVLLPTSSGLPPGWEEKQDER;RGS(0.994)LQAYT(0.006)FEEQPTLPVLLPTSSGLPPGWEEKQDER;RGS(0.896)LQAY(0.021)T(0.083)FEEQPTLPVLLPTSSGLPPGWEEKQDER;RGS(0.989)LQAY(0.001)T(0.011)FEEQPTLPVLLPTSSGLPPGWEEKQDER 205.44 1.6259e-16 1460533000.0 1085702.0 1179896.0 1017863.0 900668.0 863210.0 931920.0 694131.0 753081.0 1370921.0 777336.0 True False 1025475.9457667202 1123212.0250999983 1083476.0776183836 986267.2159242928 931139.7160069483 926103.5416018285 764300.535545731 750468.7377814276 1121996.3045060611 770449.4077982577 1.3310101031776524 1.4578660373169001 1.4062910122997876 1.2801193770046315 1.208566982571771 1.2020303114365285 0.9920191096387515 0.9740662140633872 1.4562881003600643 1.0 19.55534069851632 -5.747151423950677 1.3582019373964382 1.1122749118732314 1.4080018763677278 0.44062985584014347 0.13445646832057265 0.3888758420114551 1.5004053894059595 0.05173961663737473 0.07381814939440835 1.7899816385306442e-06 5.747151423950677 0.2957269644944964 RGS(ph)LSNAGDPEIVK ddPTM_KYSE-520_SHP099_60min_R1 10 RGSLSNAGDPEIVK 14 1 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 RGS(0.935)LS(0.065)NAGDPEIVK;RGS(0.999)LS(0.001)NAGDPEIVK;RGS(0.961)LS(0.039)NAGDPEIVK;RGS(0.998)LS(0.002)NAGDPEIVK;RGS(0.937)LS(0.063)NAGDPEIVK;RGS(0.98)LS(0.02)NAGDPEIVK;RGS(0.961)LS(0.039)NAGDPEIVK;RGS(0.978)LS(0.022)NAGDPEIVK;RGS(0.637)LS(0.363)NAGDPEIVK;RGS(0.991)LS(0.009)NAGDPEIVK 211.33 6.4381e-14 194976400000.0 210210100.0 182624000.0 169248800.0 161269000.0 171790500.0 172102500.0 165426300.0 167569500.0 197067300.0 172710400.0 True False 198549326.70955473 173850468.91578746 180158848.45565474 176595957.27270702 185309434.99576196 171028344.45931908 182149204.80910498 166988240.5155153 161284845.98236316 171180320.222658 1.159884071085375 1.0155984560004112 1.0524507035698856 1.031637030722952 1.0825393640736616 0.9991121890463738 1.0640779534246665 0.975510738023565 0.9421926876440961 1.0 27.350941610667657 -1.0000000000000053 0.2336851106722939 0.9787629002661652 1.7463693370596525 0.4892381735575362 0.0416638520529929 47.96337607663736 0.6324667999040445 0.060160760295360174 14.160069562176425 0.09999999999999877 1.0000000000000053 0.7676064367934873 RGS(ph)LSQEMAK ddPTM_KYSE-520_SHP099_60min_R1 3 RGSLSQEMAK 10 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RGS(0.995)LS(0.005)QEMAK;RGS(0.879)LS(0.121)QEMAK;RGS(0.883)LS(0.117)QEMAK 159.93 8.2535e-05 2616030000.0 2606330.0 2068250.0 2001500.0 2183050.0 2152890.0 2773800.0 3083310.0 3794240.0 3906760.0 3402740.0 True False 2461751.6793099535 1968888.1654934562 2130519.8925132263 2390526.415642086 2322310.194731525 2756487.6853111316 3395001.065005753 3781078.6670222734 3197390.865405153 3372594.3708916637 0.7299281824570866 0.5837903847811119 0.6317154268243497 0.7088093475676609 0.6885827168470132 0.8173196602301027 1.0066437560079795 1.1211187149145994 0.9480508219432895 1.0 21.685427382108557 -6.557667614046468 2.0118788821670726 1.0362132070844596 0.6598792166911526 0.8977862531734114 0.055667555526931145 0.09287923154197675 0.7597268226695244 0.025276123381645067 0.018857778853301456 2.769060126320786e-07 6.557667614046468 -0.37633399039330706 RGS(ph)LTLTISGES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 RGSLTLTISGESPK 14 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 2 RGS(0.941)LT(0.059)LTIS(0.011)GES(0.989)PK;RGS(0.733)LT(0.267)LTISGES(1)PK;RGS(0.873)LT(0.127)LTISGES(1)PK;RGS(0.987)LT(0.013)LTIS(0.002)GES(0.998)PK 201.85 2.1688000000000004e-11 3936260000.0 4192900.0 3828350.0 3531650.0 3300970.0 3490640.0 3344930.0 3314020.0 3571070.0 4343740.0 3584890.0 True False 3960311.478661076 3644430.3195294957 3759305.809839791 3614693.1963271797 3765333.508975215 3324053.0511312135 3649033.483318369 3558682.791664008 3555026.312774514 3553130.663602215 1.1145977600063983 1.02569555261858 1.0580263338890423 1.0173262788660162 1.059722781249442 0.9355279514998869 1.0269910759822511 1.0015626017130945 1.0005335151875268 1.0 21.76065931295103 -1.0000000046884232 0.42974383286474843 0.9976766915768451 3.085524763184762 0.5191938754738806 0.031130297905004604 65.62085856149444 0.8269607522395171 0.019867409729171046 118.57441086057304 0.09999999892045067 1.0000000046884232 2.087848071607917 RGS(ph)LTLTISGESPK ddPTM_KYSE-520_SHP099_60min_R1 17 RGSLTLTISGESPK 14 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RGS(0.941)LT(0.059)LTISGESPK;RGS(0.97)LT(0.022)LT(0.007)IS(0.001)GESPK;RGS(0.758)LT(0.218)LT(0.024)ISGESPK;RGS(0.975)LT(0.025)LTISGESPK;RGS(0.945)LT(0.044)LT(0.012)ISGESPK;RGS(0.686)LT(0.312)LT(0.002)ISGESPK;RGS(0.973)LT(0.027)LTISGESPK;RGS(0.75)LT(0.247)LT(0.003)ISGESPK;RGS(0.472)LT(0.472)LT(0.054)IS(0.001)GESPK;RGS(0.965)LT(0.031)LT(0.003)IS(0.001)GESPK;RGS(0.693)LT(0.303)LT(0.004)ISGESPK;RGS(0.444)LT(0.444)LT(0.112)ISGESPK;RGS(0.797)LT(0.203)LTISGESPK;RGS(0.853)LT(0.147)LTISGESPK;RGS(0.465)LT(0.465)LT(0.071)ISGESPK;RGS(0.992)LT(0.008)LTISGESPK;RGS(0.473)LT(0.473)LT(0.053)IS(0.001)GESPK 215.64 5.1145e-14 15452474000.0 22563295.0 22469318.0 18752703.0 17500698.0 18735710.0 17956650.0 17331344.0 19743876.0 23527353.0 20116015.0 True False 21311664.047536567 21389858.2361461 19961532.24076569 19163959.07614329 20210103.785392355 17844575.886668865 19083365.389137343 19675389.102411307 19255378.771504417 19937802.75712284 1.0689073569013472 1.0728292629188794 1.0011901754637618 0.9611871132237432 1.0136575244316846 0.8950121587642769 0.9571448580170026 0.9868383864607254 0.9657723574692991 1.0 24.24900309069448 -4.891359898879186 2.671441267449588 0.9663276723402137 1.07399118089111 0.6405423741674217 0.030186779907958053 0.16484720456577606 2.3442318989715805 0.00842933830084168 0.02216927033929487 1.2842219869306257e-05 4.891359898879186 0.10766350855089635 RGS(ph)MEQAPAVALPPTHK ddPTM_KYSE-520_SHP099_60min_R1 10 RGSMEQAPAVALPPTHK 17 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 RGS(1)MEQAPAVALPPTHK;RGS(1)MEQAPAVALPPTHK;RGS(1)MEQAPAVALPPTHK;RGS(1)MEQAPAVALPPTHK;RGS(1)MEQAPAVALPPTHK;RGS(1)MEQAPAVALPPTHK;RGS(1)MEQAPAVALPPTHK;RGS(1)MEQAPAVALPPTHK;RGS(1)MEQAPAVALPPTHK;RGS(1)MEQAPAVALPPTHK 136.57 9.2736e-06 18234250000.0 5469090.0 4787050.0 4423850.0 4423530.0 4594800.0 4183780.0 4953270.0 4783090.0 5155940.0 5256820.0 True False 5165708.67533938 4557072.932491455 4709018.449410264 4843940.961217209 4956384.619164194 4157667.477125605 5453994.87085665 4766498.577171597 4219751.266670347 5210248.664544073 0.9914514657413975 0.874636361120823 0.9037991759309497 0.9296947752571578 0.9512760212180595 0.7979787040527796 1.0467820678063369 0.914831303466913 0.8098944097209609 1.0 22.312920797594494 -10.037840238308302 4.634265890211176 1.0000029853488936 0.9141185665215321 0.11642395197039324 0.07156833201486809 2.1140593288520936e-06 4.389565692011745e-07 0.06636406886454142 0.016095091624198633 9.165575974727492e-11 10.037840238308302 -0.08588441882736153 RGS(ph)MEQAPAVALPPTHKK ddPTM_KYSE-520_SHP099_60min_R1 2 RGSMEQAPAVALPPTHKK 18 2 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 RGS(1)MEQAPAVALPPTHKK;RGS(1)MEQAPAVALPPTHKK 156.41 5.5996e-07 1936880000.0 2579100.0 2759200.0 2496900.0 1841880.0 2210530.0 2052470.0 2057790.0 1721550.0 2872200.0 2346220.0 True False 2436032.1816916177 2626643.8903563656 2657854.169181255 2016931.7214185875 2384486.1348047857 2039659.7734049088 2265811.495295051 1715578.3448627898 2350680.8822698817 2325434.3161315364 1.0475600900841895 1.1295283088132564 1.1429495775235285 0.8673354940310003 1.0253938880421636 0.8771091745123869 0.9743605654982891 0.7377453463044834 1.0108567100619483 1.0 21.149068759614735 -5.257878764132031 24.971516340210446 0.9205421864809936 1.108964232129211 0.48267769506730474 0.08475905914516149 239.98332215694595 1683058.497230134 0.022282338074086364 0.036714936486940075 5.522315764696229e-06 5.257878764132031 0.1884220456482174 RGS(ph)MFYDEDGDLAHEFYEETIVTK ddPTM_KYSE-520_SHP099_60min_R1 6 RGSMFYDEDGDLAHEFYEETIVTK 24 1 O75896 O75896 TUSC2 Tumor suppressor candidate 2 1 RGS(0.529)MFY(0.47)DEDGDLAHEFY(0.001)EETIVTK;RGS(1)MFYDEDGDLAHEFYEETIVTK;RGS(0.992)MFY(0.008)DEDGDLAHEFYEETIVTK;RGS(1)MFYDEDGDLAHEFYEETIVTK;RGS(0.532)MFY(0.458)DEDGDLAHEFY(0.01)EETIVTK;RGS(0.931)MFY(0.066)DEDGDLAHEFY(0.003)EETIVTK 256.05 6.010599999999999e-30 2203280000.0 1122871.0 1448146.0 1098277.0 1515957.0 1313193.0 1156893.0 1189357.0 1365649.0 1634542.0 1198525.0 True False 1060583.107242156 1378574.8924485378 1169073.6927253313 1660033.0974909065 1416533.8180539056 1149672.40165933 1309588.8125657304 1360911.8823638712 1337750.3762506694 1187907.0009383415 0.8928166147723594 1.1605074230218237 0.9841458058601107 1.3974436518848925 1.1924618820622903 0.9678134742460398 1.1024337860887015 1.145638405438196 1.126140661848078 1.0 20.17999046393351 -4.255977744941237 24.016006341442683 1.1256153860764655 0.8928164392222775 0.2456036502307264 0.11883156786059264 496.70706777706584 2184008.4576061624 0.029867774834546373 0.24677378730532654 5.546541350185451e-05 4.255977744941237 -0.232798946854188 RGS(ph)MNNELLS(ph)PEFGPVRDPLADGVEGLGR ddPTM_KYSE-520_SHP099_60min_R1 5 RGSMNNELLSPEFGPVRDPLADGVEGLGR 29 2 O00562-2;O00562 O00562-2 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 2 RGS(1)MNNELLS(1)PEFGPVRDPLADGVEGLGR;RGS(1)MNNELLS(1)PEFGPVRDPLADGVEGLGR;RGS(1)MNNELLS(1)PEFGPVRDPLADGVEGLGR;RGS(1)MNNELLS(1)PEFGPVRDPLADGVEGLGR;RGS(1)MNNELLS(1)PEFGPVRDPLADGVEGLGR 169.22 2.0926e-10 711549000.0 209693.0 233390.9 226261.0 219394.4 200508.8 264514.0 208598.8 269908.0 371258.0 259817.0 True False 198060.91127736782 222178.4508371168 240846.14609039994 240245.57781266852 216287.70182098693 262863.0700095138 229686.00243210097 268971.7521450006 303846.90585257014 257515.22351456727 0.7691231165840717 0.8627779274748333 0.9352695456343598 0.9329373795218681 0.8399025846670064 1.020767108142032 0.8919317440629212 1.0444887431277836 1.1799182266029486 1.0 17.974298196984197 -6.983353651229274 1.0040192775323522 1.0908768882057804 0.8744943569985383 0.5450750984569919 0.07558155606163716 0.4346510861018563 0.8167385976431454 0.061598413586762456 0.029361331010981317 1.039073691002495e-07 6.983353651229274 -0.21638253120724216 RGS(ph)MNNELLSPEFGPVRDPLADGVEGLGR ddPTM_KYSE-520_SHP099_60min_R1 5 RGSMNNELLSPEFGPVRDPLADGVEGLGR 29 2 O00562-2;O00562 O00562-2 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 1 RGS(0.982)MNNELLS(0.018)PEFGPVRDPLADGVEGLGR;RGS(0.598)MNNELLS(0.402)PEFGPVRDPLADGVEGLGR;RGS(0.662)MNNELLS(0.338)PEFGPVRDPLADGVEGLGR;RGS(1)MNNELLSPEFGPVRDPLADGVEGLGR;RGS(0.991)MNNELLS(0.009)PEFGPVRDPLADGVEGLGR 226.4 6.7774e-23 4926270000.0 1179192.0 954245.0 902604.0 965348.0 1026425.0 952007.0 825589.0 911253.0 1163712.0 859458.0 True False 1113779.8690990254 908401.6378490538 960787.2980574627 1057094.3836775399 1107198.8079406316 946065.171183934 909047.5930921739 908092.0760310487 952411.2355922462 851843.8707682065 1.3074929659288395 1.0663945225430131 1.1278913085223108 1.2409485117551355 1.2997673000125503 1.1106086498348073 1.0671528249330247 1.0660311204823445 1.1180584474163633 1.0 19.7002295064029 -6.497488788908796 13.746791337899673 1.0712433902678373 1.1986608351587684 0.46891732245730366 0.07325918156936218 2.969431661406793 1607.4399466188465 0.027047316662141278 0.023474636716619684 3.180615793249074e-07 6.497488788908796 0.1274174448909311 RGS(ph)MSYLAAVEEEVEESSVK ddPTM_KYSE-520_SHP099_60min_R1 3 RGSMSYLAAVEEEVEESSVK 20 1 A0A0C4DGK3;Q8WXH0-7;Q8WXH0;Q8WXH0-2;G3V5X4;A0A0A0MRE3 A0A0C4DGK3 SYNE2 Nesprin-2 1 RGS(0.939)MS(0.06)YLAAVEEEVEESSVK;RGS(0.676)MS(0.186)Y(0.139)LAAVEEEVEESSVK;RGS(0.989)MS(0.011)YLAAVEEEVEESSVK 234.73 2.5749000000000002e-26 480540000.0 297717.0 423680.0 305863.0 714460.0 412712.0 265427.0 324319.0 360661.0 480846.0 282849.0 True False 281202.0445258746 403325.7768433545 325579.418378103 782362.063589769 445190.0863899396 263770.37163785327 357104.329568418 359409.95116991055 393536.48754123814 280343.17791319237 1.0030636258712462 1.438685898639001 1.1613602328461794 2.7907298098476487 1.5880182628442334 0.9408838609924339 1.2738113772791522 1.2820356601693408 1.4037669490323599 1.0 18.096834437015932 -6.152800134972252 8.019885967585784 1.2044824358312891 1.632676347123747 0.16441142443889478 0.4647343604072997 0.5893246313801902 39.183770562623366 0.16135163856919266 0.1614813872581383 7.033959526112349e-07 6.152800134972252 0.428193911292458 RGS(ph)PAPANPGR ddPTM_KYSE-520_SHP099_60min_R1 5 RGSPAPANPGR 11 1 E9PJN1;O75676-2;O75676 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 RGS(1)PAPANPGR;RGS(1)PAPANPGR;RGS(1)PAPANPGR;RGS(1)PAPANPGR;RGS(1)PAPANPGR 75.02 0.012168 2570640000.0 1030387.0 970845.0 917550.0 869629.0 928472.0 963540.0 966647.0 945653.0 1185317.0 916224.0 True False 973229.3790844394 924204.1489319463 976696.7411319073 952278.2786965066 1001537.464116962 957526.1894529857 1064365.1123255908 942372.7504600689 970093.3122099754 908106.9681714854 1.0717122687034115 1.0177260843982656 1.0755304995605646 1.0486410875295475 1.1028849014710274 1.054420044128731 1.1720701961672404 1.037733200481414 1.0682588573935319 1.0 19.792502720588647 -2.49355899162663 8.343913521524792 1.0682191882400094 1.2093655494338584 0.0 0.04556196551319678 0.0 0.0 0.010076180265753574 0.0 0.0032095268141740683 2.49355899162663 0.14114636119384905 RGS(ph)PS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 RGSPSPPR 8 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 2 RGS(1)PS(1)PPR;RGS(1)PS(1)PPR 52.693000000000005 0.042144 0.0 54438.0 47930.0 49719.0 35077.0 57146.0 43523.0 43195.0 48511.0 60009.0 47347.0 True False 51418.215620537456 45627.37085560328 52923.96629321269 38410.70753371541 61643.06508373756 43251.356812962855 47561.57214257517 48342.726663552516 49112.87830378569 46927.542415408614 1.0956937647698834 0.9722940624442667 1.1277804796322586 0.8185109544774135 1.313579657295182 0.921662516014504 1.0135108231655099 1.030156794396274 1.0465683003178008 1.0 15.518147288286803 -10.315038929406352 6.880703768895633 0.9999993070301667 1.0357872748519026 0.008031508225603834 0.12414876806500084 1.212289300596438e-06 1.2077560378061046e-07 0.1104312969841478 0.026783004803303524 4.841289691554353e-11 10.315038929406352 0.03578796782173588 RGS(ph)PSAAFTFPDTDDFGK ddPTM_KYSE-520_SHP099_60min_R1 8 RGSPSAAFTFPDTDDFGK 18 1 Q9ULT0;Q9ULT0-4;H7C055;Q9ULT0-3 Q9ULT0 TTC7A Tetratricopeptide repeat protein 7A 1 RGS(0.508)PS(0.492)AAFTFPDTDDFGK;RGS(0.972)PS(0.028)AAFTFPDTDDFGK;RGS(0.957)PS(0.043)AAFTFPDTDDFGK;RGS(0.995)PS(0.005)AAFTFPDTDDFGK;RGS(0.996)PS(0.004)AAFTFPDTDDFGK;RGS(0.996)PS(0.004)AAFTFPDTDDFGK;RGS(0.808)PS(0.191)AAFT(0.001)FPDTDDFGK;RGS(0.986)PS(0.014)AAFTFPDTDDFGK 288.91 4.760299999999999e-38 10472500000.0 10461650.0 10287800.0 9185630.0 8106080.0 9941490.0 9409910.0 9046790.0 9124590.0 11510990.0 9527260.0 True False 9881321.419717759 9793558.645697389 9777750.407327635 8876479.406018171 10723828.703659493 9351179.261261113 9961327.821361914 9092938.926985312 9420884.384443903 9442855.888496112 1.0464335722581357 1.037139479977506 1.0354653849202033 0.9400206368533129 1.1356552329390035 0.9902914300167722 1.0549062634215818 0.9629437359160494 0.9976732140878084 1.0 23.170791822243572 -7.2611534465720355 24.99969930214977 0.9852313561987804 1.0330118525379752 0.17238605826764108 0.04749766422380675 46.164955216819244 4036762.37612182 0.022926786835470163 0.01217450277047338 5.4808327984478745e-08 7.2611534465720355 0.04778049633919479 RGS(ph)PTTGFIEQK ddPTM_KYSE-520_SHP099_60min_R1 12 RGSPTTGFIEQK 12 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RGS(0.892)PT(0.107)T(0.002)GFIEQK;RGS(0.499)PT(0.499)T(0.001)GFIEQK;RGS(1)PTTGFIEQK;RGS(0.909)PT(0.09)T(0.001)GFIEQK;RGS(0.984)PT(0.015)TGFIEQK;RGS(0.913)PT(0.086)T(0.001)GFIEQK;RGS(0.989)PT(0.011)TGFIEQK;RGS(0.913)PT(0.087)TGFIEQK;RGS(0.947)PT(0.047)T(0.006)GFIEQK;RGS(0.834)PT(0.042)T(0.124)GFIEQK;RGS(0.958)PT(0.042)TGFIEQK;RGS(0.95)PT(0.05)TGFIEQK 243.2 2.2185999999999998e-15 176734700000.0 45501300.0 41329200.0 38073200.0 36318700.0 38442600.0 38159500.0 38282900.0 38122700.0 45966200.0 36786100.0 True False 42977252.18440719 39343683.195606016 40527459.3912739 39770418.32838472 41467813.91152646 37921332.40595219 42152909.13709899 37990461.25160505 37619896.79360551 36460203.77315271 1.1787441576520556 1.0790856639308346 1.1115532881666474 1.090789798538358 1.1373445461119742 1.0400746151033686 1.1561347654380933 1.0419706233122903 1.031807091031859 1.0 25.119819288717913 -7.4346662360825215 5.614084296069985 1.0220912948483118 1.109119958228499 0.5367788952812256 0.03805012606920416 0.17188836427394746 8.451519541791 0.02036590356772506 0.009392744912203224 3.675646727163325e-08 7.4346662360825215 0.08702866338018711 RGS(ph)PVPPVPER ddPTM_KYSE-520_SHP099_60min_R1 6 RGSPVPPVPER 11 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER;RGS(1)PVPPVPER 129.29 0.00016609 48874430000.0 10009670.0 9184290.0 8429150.0 7921200.0 9187910.0 8662160.0 7957760.0 9017960.0 10201670.0 8147560.0 True False 9454413.651317544 8743062.92249965 8972506.496116845 8674028.466404375 9910946.24494317 8608096.246374886 8762208.04105334 8986678.801567687 8349303.891172673 8075378.957105756 1.170770276111728 1.082681440578882 1.1110941720229341 1.0741326831197004 1.2273041670969813 1.0659680854729892 1.0850522418323445 1.1128491739276276 1.0339210005526591 1.0 22.945098532747938 -7.878070752085372 0.8844893543156592 0.9980823042651329 1.1215325457524705 0.4237304060858468 0.04685021656305926 0.5760114053085668 1.011407772442002 0.043878775090621915 0.01579872196764013 1.3241258007167368e-08 7.878070752085372 0.12345024148733763 RGS(ph)PVPPVPERR ddPTM_KYSE-520_SHP099_60min_R1 7 RGSPVPPVPERR 12 2 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RGS(1)PVPPVPERR;RGS(1)PVPPVPERR;RGS(1)PVPPVPERR;RGS(1)PVPPVPERR;RGS(1)PVPPVPERR;RGS(1)PVPPVPERR;RGS(1)PVPPVPERR 96.993 0.0011539000000000002 23934180000.0 5081189.0 4762090.0 4841155.0 3804563.0 4210171.0 4397630.0 3633118.0 3564164.0 5657880.0 3865020.0 True False 4799325.317070847 4533312.04835718 5153223.597421868 4166147.5236364235 4541487.505103847 4370182.759951979 4000389.0232547396 3551800.746966132 4630551.615548049 3830778.929740054 1.252832754146039 1.1833917152365663 1.3452156054778006 1.0875457968333158 1.1855258652088336 1.1408078722643824 1.0442756151230566 0.9271745543424369 1.2087754737291159 1.0 21.86920634106083 -6.087076262316419 0.8700969092769065 1.0373616199027436 1.247468456701851 0.4546371035785569 0.0874663789888394 0.5355915496832141 0.8886150425681996 0.05014099080517108 0.05629802976761485 8.183210779490633e-07 6.087076262316419 0.21010683679910747 RGS(ph)RPEMTPVSLR ddPTM_KYSE-520_SHP099_60min_R1 4 RGSRPEMTPVSLR 13 2 A0A5E8;Q99501-2;Q99501-4;Q99501 A0A5E8 GAS2L1 GAS2-like protein 1 1 RGS(1)RPEMTPVSLR;RGS(1)RPEMTPVSLR;RGS(0.987)RPEMT(0.013)PVSLR;RGS(1)RPEMTPVSLR 124.99 5.4096000000000005e-05 4630660000.0 820860.0 990460.0 751970.0 548230.0 716860.0 721980.0 626550.0 656980.0 901240.0 684830.0 True False 775325.2594561597 942876.8148892295 800443.1893945398 600333.6143686394 773272.8036245416 717473.8550151169 689887.7885387309 654701.0897202855 737597.5344115694 678762.9389896772 1.142262216923943 1.3891106316038404 1.1792676697787607 0.8844525531435496 1.1392383985718786 1.0570315699367145 1.0163898894739491 0.9645504374396056 1.0866791512062606 1.0 19.37254826914139 -5.009538548886952 23.59916280015344 1.0263829194430467 1.2703121684822143 0.5852951580102298 0.08519659807875218 133.8874621494902 331254.96110416116 0.02133716674057776 0.040755137219326394 9.782761170955607e-06 5.009538548886952 0.24392924903916757 RGS(ph)RS(ph)S(ph)PEPK ddPTM_KYSE-520_SHP099_60min_R1 2 RGSRSSPEPK 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 RGS(1)RS(1)S(1)PEPK;RGS(1)RS(1)S(1)PEPK 96.135 0.019392 1603760000.0 1546930.0 1255600.0 1269770.0 1512250.0 1233880.0 1402240.0 1510050.0 1270550.0 1677080.0 1153550.0 True False 1461118.7091714987 1195279.091305976 1351621.405903832 1655973.7853254594 1330979.3361831459 1393488.100025483 1662700.590667798 1266142.7585985982 1372564.5477463868 1143330.4444483193 1.2779496218842654 1.0454362490825853 1.182179143804762 1.4483772328169755 1.1641248098010468 1.218797336143594 1.454260750897861 1.1074162896182989 1.2004968068603104 1.0 20.124810999707798 -8.17713019124856 1.4465530817459336 1.0028456614064734 1.2431525928377871 0.2532187178909544 0.12398735079026661 1.0005617240112448 4.118374196063197 0.12018220257199777 0.03542868665714308 6.650737528809169e-09 8.17713019124856 0.24030693143131376 RGS(ph)RS(ph)SPEPK ddPTM_KYSE-520_SHP099_60min_R1 2 RGSRSSPEPK 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGS(0.992)RS(0.6)S(0.409)PEPK;RGS(0.976)RS(0.892)S(0.132)PEPK 101.72 0.013091 4124350000.0 3365630.0 2638990.0 2341320.0 2590510.0 2572670.0 2869700.0 2808380.0 2560790.0 3268410.0 3060190.0 True False 3178931.7946829307 2512208.959195253 2492245.233444455 2836711.291534767 2775124.4925100417 2851789.1378388316 3092278.4575475254 2551907.217182881 2674949.1339111836 3033079.0973917944 1.048087337193599 0.8282701764538722 0.8216881767401275 0.9352579344119684 0.9149528922263936 0.9402290696247065 1.0195179084537023 0.8413586112466759 0.8819252805544788 1.0 21.532351690737276 RGS(ph)RSS(ph)PEPK ddPTM_KYSE-520_SHP099_60min_R1 2 RGSRSSPEPK 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RGS(0.999)RS(0.053)S(0.948)PEPK;RGS(0.77)RS(0.307)S(0.924)PEPK 91.969 0.0026282 1009420000.0 1360230.0 1053240.0 932600.0 1099790.0 1105560.0 1176000.0 1168300.0 964950.0 1332050.0 1301350.0 True False 1284775.3303487215 1002640.7694545283 992716.8882127587 1204313.71093608 1192561.2822240735 1168660.1477849486 1286403.1655092137 961602.8136710236 1090183.2982478915 1289821.0514349802 0.9960880456396295 0.7773487402295445 0.769654741724303 0.9337060436377823 0.9245943698137806 0.9060637880617354 0.9973501084340622 0.7455319577868573 0.8452205808201197 1.0 20.298739490697116 -4.220166382820651 22.83193995845459 0.8742285074720207 0.9960891920287426 0.14158220056507353 0.08705791510947357 17783.139864425502 9836879.156819256 0.022187416751875903 6.782191682549974 6.023287833225719e-05 4.220166382820651 0.12186068455672183 RGS(ph)S(ph)GSVDETLFALPAASEPVIR ddPTM_KYSE-520_SHP099_60min_R1 6 RGSSGSVDETLFALPAASEPVIR 23 1 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 2 RGS(0.642)S(0.68)GS(0.603)VDET(0.075)LFALPAASEPVIR;RGS(0.889)S(0.731)GS(0.379)VDETLFALPAASEPVIR;RGS(0.612)S(0.653)GS(0.591)VDET(0.144)LFALPAASEPVIR;RGS(0.915)S(0.737)GS(0.346)VDET(0.002)LFALPAASEPVIR;RGS(0.928)S(0.774)GS(0.298)VDETLFALPAASEPVIR;RGS(0.537)S(0.537)GS(0.537)VDET(0.39)LFALPAASEPVIR 176.94 5.2088000000000007e-11 3658350000.0 962578.0 927731.0 738826.0 1029315.0 880118.0 956034.0 921178.0 986995.0 1178955.0 744948.0 True False 909181.8794883295 883161.4102073791 786451.9061233962 1127140.78812516 949378.2794135882 950067.0371831945 1014299.662070914 983571.3447113648 964886.4910370056 738348.3402807744 1.23137255125757 1.1961310969718388 1.0651502322390667 1.5265704906935094 1.2858135213692832 1.2867463571759492 1.3737413721079168 1.3321237294815866 1.3068174442839333 1.0 19.493942090492062 -5.23029457243047 24.999845153373496 1.3172444053204775 1.1674092987229108 0.18678254494526703 0.1285592042060817 998.6083688392636 801578.6745065813 0.03265165514498843 0.056545427229464526 5.884443910287995e-06 5.23029457243047 -0.14983510659756671 RGS(ph)S(ph)PDVHALLEITEESDAVLVDK ddPTM_KYSE-520_SHP099_60min_R1 9 RGSSPDVHALLEITEESDAVLVDK 24 1 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 2 RGS(0.902)S(0.902)PDVHALLEIT(0.168)EES(0.028)DAVLVDK;RGS(0.775)S(0.775)PDVHALLEIT(0.225)EES(0.225)DAVLVDK;RGS(0.628)S(0.628)PDVHALLEIT(0.628)EES(0.115)DAVLVDK;RGS(1)S(1)PDVHALLEITEESDAVLVDK;RGS(1)S(1)PDVHALLEITEESDAVLVDK;RGS(0.996)S(0.996)PDVHALLEIT(0.008)EESDAVLVDK;RGS(0.99)S(0.99)PDVHALLEIT(0.02)EESDAVLVDK;RGS(0.908)S(0.908)PDVHALLEIT(0.146)EES(0.039)DAVLVDK;RGS(0.967)S(0.968)PDVHALLEIT(0.051)EES(0.014)DAVLVDK 148.89 3.2329000000000003e-07 301133300.0 208216.0 217312.3 233702.7 280628.0 225776.0 209453.4 206093.6 260530.0 287500.5 199910.8 True False 196665.84341169425 206872.29091558757 248767.54997954072 307298.8007461154 243543.2867102847 208146.1236378062 226927.55236770524 259626.28223815886 235297.65649781766 198139.7458402489 0.9925612984799981 1.044072657095156 1.2555156408654662 1.5509195262311302 1.2291490820152895 1.0505016182145754 1.1452904181610621 1.3103190434466578 1.1875338564708138 1.0 17.596158781090598 -9.3569466256396 14.102538228004589 0.9999796921774495 1.2024516884994283 0.12864073662764697 0.15241732325432641 0.0 0.0 0.16083257075002502 0.039007628073057576 4.395956379853147e-10 9.3569466256396 0.20247199632197876 RGS(ph)S(ph)PDVHALLEITEESDAVLVDKS(ph)DS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 4 RGSSPDVHALLEITEESDAVLVDKSDSD 28 2 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 4 RGS(1)S(1)PDVHALLEITEESDAVLVDKS(1)DS(1)D;RGS(0.99)S(0.991)PDVHALLEIT(0.015)EES(0.004)DAVLVDKS(1)DS(1)D;RGS(0.999)S(0.998)PDVHALLEIT(0.001)EES(0.002)DAVLVDKS(1)DS(1)D;RGS(1)S(1)PDVHALLEITEESDAVLVDKS(1)DS(1)D 144.8 1.2601e-06 969282000.0 494390.0 522888.0 647489.0 566511.0 617570.0 477436.0 527465.0 675543.0 792144.0 557061.0 True False 466965.20115796843 497767.67560911033 689227.1769590294 620352.0351122571 666169.2455073628 474456.1448281079 580786.3097623205 673199.6990059213 648310.6179252117 552125.8729269002 0.8457585924791343 0.9015474550583383 1.2483153040905965 1.1235699421649634 1.2065532121795017 0.8593260488101134 1.0519092443241016 1.2192866373698283 1.174208001679802 1.0 19.074637682646436 -4.630100977662466 6.86241072223946 1.110637862636367 0.8601457364816575 0.4238950387214244 0.11109838033721103 0.19426683208970663 10.845572157533857 0.029596885357950242 0.07964204921587112 2.3436838228348237e-05 4.630100977662466 -0.2504921261547096 RGS(ph)S(ph)PDVHALLEITEESDAVLVDKS(ph)DSD ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSPDVHALLEITEESDAVLVDKSDSD 28 2 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 3 RGS(0.829)S(0.59)PDVHALLEIT(0.351)EES(0.231)DAVLVDKS(0.668)DS(0.332)D 99.725 0.0016523 211340000.0 249700.0 321520.0 317180.0 377680.0 291490.0 244450.0 273270.0 362810.0 437000.0 249660.0 True False 235848.64323539083 306073.69658864127 337625.9303059435 413574.5936463678 314428.60464877065 242924.29687587684 300894.7984581895 361551.49679049023 357651.81587352493 247448.20663254103 0.9531232674707744 1.2369202458725381 1.3644307020875515 1.6713582178452533 1.2706845158740434 0.9817177508852098 1.2159910251643744 1.461119891353231 1.4453603068727652 1.0 17.916767060825542 -10.140498296825147 5.343823998319406 0.9999924900211647 1.2942452976282839 0.15078947207398252 0.2053839652286378 1.9705513032312916e-05 3.1697783280113247e-06 0.21322648825614257 0.051713699994101456 7.236052400409947e-11 10.140498296825147 0.29425280760711914 RGS(ph)S(ph)PDVHALLEITEESDAVLVDKSDS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSPDVHALLEITEESDAVLVDKSDSD 28 2 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 3 RGS(0.995)S(0.975)PDVHALLEIT(0.003)EES(0.027)DAVLVDKS(0.037)DS(0.963)D 136.77 1.4916e-06 185180000.0 128040.0 153390.0 175000.0 176420.0 160970.0 123480.0 120760.0 207300.0 238450.0 132450.0 True False 120937.36595858796 146020.914156916 186280.78000989984 193186.9037573928 173637.4232059852 122709.31551741966 132967.59930402532 206580.92468418382 195153.4908353364 131276.59604454073 0.9212408731070024 1.1123149027064405 1.4189945932685275 1.4716020187775634 1.3226837718055386 0.9347387060202698 1.0128812241514158 1.57363102722509 1.4865825037779234 1.0 17.00225021031661 -7.261005891923101 24.999518167646062 1.3975800635133424 1.1862962445635417 0.10737514894442901 0.22808251650738412 82.07473210201253 4733677.686307616 0.12219418375470842 0.06496203100507222 5.482695266872657e-08 7.261005891923101 -0.21128381894980075 RGS(ph)S(ph)PDVHALLEITEESDAVLVDKSDSD ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSPDVHALLEITEESDAVLVDKSDSD 28 2 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 2 RGS(0.977)S(0.935)PDVHALLEIT(0.029)EES(0.059)DAVLVDKSDSD 88.98700000000001 0.0049186 62099000.0 77548.0 95922.0 96286.0 87254.0 84023.0 73811.0 64058.0 83797.0 135000.0 73871.0 True False 73246.25785189468 91313.76313814268 102492.74962304694 95546.59392612842 90635.13207452628 73350.31817019981 70533.60778583364 83506.32776536679 110487.40307305678 73216.56041076839 1.0004056109841775 1.2471736261010238 1.3998574782539597 1.3049861041010582 1.2379048068638312 1.0018268784914368 0.9633559319109976 1.1405387974642553 1.5090493524031585 1.0 16.15988237942948 -6.040895768607724 21.720146091859434 1.1215519571071548 1.2529494269130395 0.09918994232661793 0.17109974189354638 259.7915463409795 137976.50421746715 0.059010966461975914 0.05902801695870331 9.101316795270691e-07 6.040895768607724 0.13139746980588463 RGS(ph)S(ph)PGSLEIPK ddPTM_KYSE-520_SHP099_60min_R1 2 RGSSPGSLEIPK 12 1 Q6GYQ0-2;A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-3 Q6GYQ0-2;Q6GYQ0-3 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 2 RGS(0.998)S(0.991)PGS(0.012)LEIPK;RGS(1)S(1)PGSLEIPK 103.88 0.00064172 751460000.0 630380.0 553540.0 519730.0 564120.0 596670.0 622630.0 557190.0 546180.0 768730.0 606140.0 True False 595411.5647686248 526947.107519521 553232.6273974014 617733.7951911378 643624.5344120958 618743.9352171284 613516.202850363 544285.4290593701 629148.0101063043 600770.0711697843 0.9910806036147478 0.8771194385457326 0.9208724834114642 1.028236633007238 1.0713325534989915 1.0299180417099447 1.021216322670269 0.9059796004810449 1.0472359398351256 1.0 19.19645341769774 -5.257311081539162 24.727059193975823 1.0141751589213708 0.9244336941966429 0.39230129742558706 0.048430848528567744 308.5127418494665 1847873.658190602 0.01375128071600658 0.022742017679694516 5.529538910379729e-06 5.257311081539162 -0.08974146472472788 RGS(ph)S(ph)S(ph)DEEGGPK ddPTM_KYSE-520_SHP099_60min_R1 3 RGSSSDEEGGPK 12 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 3 RGS(1)S(1)S(1)DEEGGPK;RGS(1)S(1)S(1)DEEGGPK;RGS(1)S(1)S(1)DEEGGPK 142.1 5.489999999999999e-05 794250000.0 2370080.0 1976920.0 2442860.0 2744950.0 2118790.0 2696270.0 2766430.0 1999680.0 3105720.0 1922470.0 True False 2238606.9377626562 1881945.7957825812 2600330.6643141964 3005829.222700692 2285526.7187339836 2679441.578799425 3046087.7421549726 1992743.5768088193 2541799.5368300276 1905438.4114590285 1.1748513750431402 0.987670755698444 1.3646889076425601 1.5775000675036641 1.199475514395616 1.4062073917926996 1.598628286191905 1.0458189384788037 1.3339709756788865 1.0 20.86169154671141 -8.450257669505444 1.1417193349820403 1.0019843954247416 1.3111072007726738 0.17454055326979234 0.19295577990230686 3.1575199264881357 6.032264867221142 0.1941962321480928 0.05990166883206139 3.5460293877122165e-09 8.450257669505444 0.30912280534793224 RGS(ph)SAWLLEELLRPDCPEPAGLDATR ddPTM_KYSE-520_SHP099_60min_R1 5 RGSSAWLLEELLRPDCPEPAGLDATR 26 2 Q5VV17 Q5VV17 OTUD1 OTU domain-containing protein 1 1 RGS(0.5)S(0.5)AWLLEELLRPDCPEPAGLDATR;RGS(0.5)S(0.5)AWLLEELLRPDCPEPAGLDATR;RGS(0.957)S(0.043)AWLLEELLRPDCPEPAGLDATR;RGS(0.968)S(0.032)AWLLEELLRPDCPEPAGLDATR;RGS(0.95)S(0.05)AWLLEELLRPDCPEPAGLDATR 227.49 2.8967000000000003e-22 1278798000.0 332142.0 325677.0 256115.0 225187.0 216219.0 234552.0 239257.0 256026.0 309806.0 256858.0 True False 313717.4211513385 310030.98806885706 272624.5826984888 246588.70477506 233234.20518217614 233088.07396535337 263443.4324832988 255137.9055629176 253553.03997371477 254582.43795250022 1.232282256680532 1.2178019448721846 1.070869557582581 0.968600610310238 0.9161441262719496 0.9155701227468124 1.0348059929116238 1.0021818771745796 0.995956523996453 1.0 17.95777337461589 -4.902725800281642 2.4680598352711383 0.9739834333684346 1.2347549274414278 0.8844113300549454 0.03569780401275105 0.09670857414857019 1.1723131108110938 0.011328193881437446 0.030566349300972642 1.2510486532363463e-05 4.902725800281642 0.26077149407299316 RGS(ph)SDPTVQR ddPTM_KYSE-520_SHP099_60min_R1 4 RGSSDPTVQR 10 1 Q2KHT3;A0A2R8YDG4;H7BZJ9;H7BZI2;H7BXG1;Q2KHT3-2 Q2KHT3 CLEC16A Protein CLEC16A 1 RGS(0.882)S(0.118)DPTVQR;RGS(0.5)S(0.5)DPTVQR;RGS(0.959)S(0.039)DPT(0.001)VQR;RGS(0.751)S(0.249)DPTVQR 90.61399999999999 0.0029546 1519290000.0 1433580.0 1168490.0 1110090.0 989090.0 997050.0 1080280.0 995860.0 928020.0 1239710.0 1101000.0 True False 1354056.459629122 1112353.9864607519 1181648.1776068008 1083092.816219247 1075512.1625615172 1073537.5718104795 1096531.2474569953 924800.9152214964 1014609.9145459216 1091245.9965650386 1.2408352139584868 1.0193430170302167 1.0828430815107914 0.9925285587562697 0.9855817716142397 0.9837722889153311 1.0048433175549722 0.8474724472140394 0.9297719466918114 1.0 20.05754493039872 -1.0000000000096176 0.4551692660997576 0.9414264097913144 7.34007954064819 0.715598452352332 0.05149223599890019 48.15574672755947 0.5746504419112515 0.03188059646930063 287.23844769601527 0.09999999999778546 1.0000000000096176 6.398653130856875 RGS(ph)SGSVDET(ph)LFALPAASEPVIR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSGSVDETLFALPAASEPVIR 23 1 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 2 RGS(0.465)S(0.482)GS(0.445)VDET(0.607)LFALPAASEPVIR 102.6 0.0015607999999999998 168520000.0 74386.0 72201.0 50599.0 81892.0 69677.0 67584.0 69108.0 89403.0 88643.0 54606.0 True False 70259.66029518539 68732.35558408962 53860.69250126248 89674.99105827235 75160.18349210049 67162.18318698814 76094.111069084 89092.88185981708 72547.66570818497 54122.233322825115 1.2981663169016824 1.2699467735213161 0.9951675899994257 1.656897462515714 1.3887117895484735 1.2409351769795438 1.405967684578024 1.6461420083757647 1.3404410951679862 1.0 15.723933752073185 -5.252762364668298 24.995996260110864 1.4049600991279436 1.1959789081419983 0.16949011782047385 0.19318501136661098 1044.0246489636068 3007530.025758579 0.05126112360296282 0.08704902954749831 5.587758596038219e-06 5.252762364668298 -0.20898119098594536 RGS(ph)SGSVDETLFALPAASEPVIR ddPTM_KYSE-520_SHP099_60min_R1 7 RGSSGSVDETLFALPAASEPVIR 23 1 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RGS(0.461)S(0.153)GS(0.383)VDET(0.003)LFALPAASEPVIR;RGS(0.543)S(0.144)GS(0.304)VDET(0.008)LFALPAASEPVIR;RGS(0.883)S(0.023)GS(0.094)VDETLFALPAASEPVIR;RGS(0.563)S(0.099)GS(0.334)VDET(0.004)LFALPAASEPVIR;RGS(0.693)S(0.147)GS(0.147)VDET(0.013)LFALPAASEPVIR;RGS(0.467)S(0.157)GS(0.357)VDET(0.02)LFALPAASEPVIR;RGS(0.594)S(0.161)GS(0.24)VDET(0.005)LFALPAASEPVIR 251.18 5.9923e-29 24944280000.0 2097770.0 2091590.0 1600190.0 1993570.0 1818390.0 2065930.0 1827890.0 2182360.0 2589240.0 1600500.0 True False 1981402.5162991807 1991106.8768594018 1703340.8077945248 2183038.2934113233 1961486.9477761795 2053035.7645521748 2012670.9596872695 2174789.902526654 2119099.2854287555 1586320.815170156 1.249055359641515 1.2551728867315068 1.0737681757090332 1.3761644381985623 1.236500794176228 1.294212207845206 1.2687666583202346 1.3709647391176518 1.3358579583420842 1.0 20.59725313837993 -5.275788513217547 24.799199073865644 1.284076857538998 1.1989161964510726 0.07836001746823285 0.11106393291981248 1526.668004250795 2638494.035423292 0.029492773063394262 0.043976911502251755 5.299214349572514e-06 5.275788513217547 -0.08516066108792542 RGS(ph)SGSVVVDLLYWR ddPTM_KYSE-520_SHP099_60min_R1 4 RGSSGSVVVDLLYWR 15 1 Q9NQC3-2;F8W914 Q9NQC3-2 RTN4 Reticulon-4;Reticulon 1 RGS(0.998)S(0.002)GSVVVDLLYWR;RGS(0.871)S(0.128)GS(0.001)VVVDLLYWR;RGS(0.97)S(0.03)GSVVVDLLYWR;RGS(0.494)S(0.494)GS(0.012)VVVDLLYWR 203.32 4.726699999999999e-13 2276189000.0 923489.0 1195713.0 898716.0 1152462.0 961431.0 948931.0 813129.0 820658.0 1053600.0 582133.0 True False 872261.2242403185 1138269.1526781963 956648.6713564409 1261991.6419796662 1037090.1499059054 943008.3696409186 895328.0146942923 817811.3289410175 862292.7990946128 576975.7545126212 1.511781417881465 1.972819730769635 1.6580396383632 2.1872524661728407 1.7974588044552213 1.6343986073340115 1.5517602042924443 1.4174102161915507 1.4945043918231928 1.0 19.138151170119823 -7.713369469960404 0.5883251347021985 1.0197824591534161 1.8465465129598053 0.640443067750988 0.1835397014972719 0.4766639204443275 0.39321204525298314 0.1854173646017748 0.0901758962153411 1.9347752805716357e-08 7.713369469960404 0.8267640538063892 RGS(ph)SPDVHALLEIT(ph)EESDAVLVDKSDSD ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSPDVHALLEITEESDAVLVDKSDSD 28 2 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 2 RGS(0.855)S(0.371)PDVHALLEIT(0.664)EES(0.11)DAVLVDKSDSD 72.87899999999999 0.058967 34804000.0 39699.0 53364.0 56925.0 55510.0 50785.0 42327.0 37018.0 57599.0 65022.0 47583.0 True False 37496.817332005514 50800.31333900299 60594.47658322037 60785.65371030993 54781.4905728767 42062.82149259655 40760.140700864635 57399.20251270768 53215.643871231885 47161.45163901383 0.7950734345290308 1.0771575423047188 1.284830607993716 1.2888842815013273 1.1615734602952565 0.8918898810527814 0.864268153000325 1.2170787903658329 1.1283716260169097 1.0 15.525320504995518 -6.1963486345292775 24.999535309738878 1.024134175173671 1.137412888199078 0.08599593394104899 0.16056388255990844 536.0753558424248 205890.73931920933 0.05778330976462195 0.057783290869321303 6.362845316373734e-07 6.1963486345292775 0.11327871302540693 RGS(ph)SPDVHALLEITEES(ph)DAVLVDKSDS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSPDVHALLEITEESDAVLVDKSDSD 28 2 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 3 RGS(0.791)S(0.209)PDVHALLEIT(0.034)EES(0.964)DAVLVDKS(0.005)DS(0.997)D 114.3 0.00022516 201540000.0 82500.0 90339.0 94947.0 125830.0 107060.0 78925.0 76263.0 116320.0 146940.0 100050.0 True False 77923.56054032725 85998.97883839649 101067.43554057139 137788.84536783115 115485.01291192642 78432.39979925782 83972.40829515483 115916.51306929218 120259.40005596277 99163.63483772217 0.7858078283218081 0.867243107608256 1.019198577240182 1.3895098298213633 1.1645903571497114 0.7909391373925503 0.8468064773197629 1.1689417522762806 1.2127369095814517 1.0 16.59752353385273 -4.749184816006795 3.594965529100139 1.0788097731513309 0.8102929222231577 0.27149150370739017 0.16585937346741886 0.32608447799859674 8.83588982233799 0.04899062096242329 0.13561765112692845 1.7816204293649658e-05 4.749184816006795 -0.2685168509281731 RGS(ph)SPDVHALLEITEESDAVLVDK ddPTM_KYSE-520_SHP099_60min_R1 8 RGSSPDVHALLEITEESDAVLVDK 24 1 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 1 RGS(0.482)S(0.482)PDVHALLEIT(0.017)EES(0.02)DAVLVDK;RGS(0.5)S(0.5)PDVHALLEITEESDAVLVDK;RGS(0.5)S(0.5)PDVHALLEITEESDAVLVDK;RGS(0.5)S(0.5)PDVHALLEITEESDAVLVDK;RGS(0.5)S(0.5)PDVHALLEITEESDAVLVDK;RGS(0.5)S(0.5)PDVHALLEITEESDAVLVDK;RGS(0.5)S(0.5)PDVHALLEITEESDAVLVDK;RGS(0.499)S(0.499)PDVHALLEIT(0.002)EESDAVLVDK 163.49 1.854e-10 655676000.0 396497.0 484815.0 477136.0 772047.0 477029.0 399518.0 477943.0 561098.0 622330.0 447188.0 True False 374502.5210128265 461523.7596778487 507892.95000459277 845422.1147556049 514568.46837626875 397024.459968323 526258.1427141749 559151.6819992578 509330.5596626331 443226.2622269989 0.8449465948410442 1.0412825209384338 1.145899946119336 1.907427846237642 1.1609611438428975 0.8957602330996045 1.1873352000172117 1.2615490769653164 1.149143458024107 1.0 18.757683841523694 -5.989290870328805 24.99515816021466 1.110387079264781 1.2546399854639008 0.05001023173570429 0.27200174253512865 781.7425715647521 1824578.571596919 0.0912597462922674 0.1033904595885664 1.024965222083214e-06 5.989290870328805 0.1442529061991198 RGS(ph)SPDVHALLEITEESDAVLVDKS(ph)DS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSPDVHALLEITEESDAVLVDKSDSD 28 2 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 3 RGS(0.626)S(0.216)PDVHALLEIT(0.072)EES(0.089)DAVLVDKS(0.997)DS(1)D 51.604 0.048855 78457000.0 46581.0 37743.0 40717.0 58334.0 39603.0 31624.0 31180.0 56372.0 59818.0 31250.0 True False 43997.059073078606 35929.76962660201 43341.68296950344 63878.045821243344 42719.53078975359 31426.622885672838 34331.978687475246 56176.4586893237 48956.55908906749 30973.149312132104 1.4204903295334281 1.1600295877090034 1.3993308375821703 2.0623684462148795 1.3792440142023419 1.0146408609912687 1.1084432629531638 1.813714779960058 1.5806128913694717 1.0 14.918730461496438 -5.984654238707384 24.991103894167676 1.3260153093130571 1.5079767892174134 0.0849658081368091 0.31640535940793235 796.4391083393409 1297022.0883728417 0.10685590171910526 0.12112282963214131 1.0359666178783696e-06 5.984654238707384 0.1819614799043563 RGS(ph)SPDVHALLEITEESDAVLVDKSDSD ddPTM_KYSE-520_SHP099_60min_R1 5 RGSSPDVHALLEITEESDAVLVDKSDSD 28 2 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 1 RGS(0.5)S(0.5)PDVHALLEITEESDAVLVDKSDSD;RGS(0.494)S(0.494)PDVHALLEIT(0.006)EES(0.006)DAVLVDKSDSD;RGS(0.5)S(0.5)PDVHALLEIT(0.001)EESDAVLVDKSDSD;RGS(0.496)S(0.496)PDVHALLEIT(0.007)EESDAVLVDKSDSD;RGS(0.485)S(0.485)PDVHALLEIT(0.024)EES(0.005)DAVLVDKSDSD 154.24 3.1575e-07 335533000.0 229417.0 298806.0 304359.0 413096.0 249105.0 208620.0 228858.0 246223.0 380528.0 218495.0 True False 216690.78167854878 284450.9112430502 323978.4681316184 452356.5196381592 268708.1462864316 207317.9251963404 251993.20007883906 245368.90988188007 311433.70753025287 216559.30428653766 1.000607119571446 1.3135012239727304 1.4960265466264633 2.0888343778553584 1.2408062870893501 0.9573263355243806 1.1636221353270395 1.1330333309402554 1.4380989473358454 1.0 17.724402632340716 -5.98380013624071 24.99992843006512 1.1428348798117798 1.4897547398651232 0.2464118120196298 0.2778112159978976 358.56847375462775 553346.6299803634 0.09091003861112272 0.10305478561491103 1.0380059997164837e-06 5.98380013624071 0.3469198600533434 RGS(ph)SPGS(ph)LEIPK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSPGSLEIPK 12 1 Q6GYQ0-2;A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-3 Q6GYQ0-2;Q6GYQ0-3 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 2 RGS(0.648)S(0.449)PGS(0.903)LEIPK 73.834 0.021026 396660000.0 466630.0 456320.0 441400.0 393710.0 408970.0 430780.0 429810.0 431210.0 510680.0 388000.0 True False 440745.1036961566 434397.702249716 469853.3502649709 431128.08002677193 441153.6122790075 428091.3422302722 473259.38934136386 429714.23315517034 417953.3851951752 384562.6218594325 1.1460944944806941 1.129588986442108 1.2217863192037275 1.1210868023059202 1.1471567625213988 1.1131902007542236 1.2306432358222072 1.1174102960849948 1.0868278959985558 1.0 18.55285901902148 -7.982506439019565 1.918013837938044 1.0017605005694887 1.1564198639253658 0.6181997405013994 0.038276235945094356 0.21477293717402957 1.802245450032717 0.03557089228549985 0.010057522439403421 1.0411026717141876e-08 7.982506439019565 0.15465936335587704 RGS(ph)SPGSLEIPK ddPTM_KYSE-520_SHP099_60min_R1 6 RGSSPGSLEIPK 12 1 Q6GYQ0-2;A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-3 Q6GYQ0-2;Q6GYQ0-3 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 RGS(0.804)S(0.196)PGSLEIPK;RGS(0.967)S(0.033)PGSLEIPK;RGS(0.797)S(0.202)PGSLEIPK;RGS(0.915)S(0.085)PGSLEIPK;RGS(0.5)S(0.5)PGSLEIPK;RGS(0.898)S(0.102)PGSLEIPK 151.59 1.0551e-05 7017890000.0 10509530.0 9292540.0 8195000.0 8189160.0 9067230.0 8577230.0 8328100.0 8634220.0 10242240.0 8220120.0 True False 9926545.42067134 8846112.430013089 8723262.81246361 8967455.30423926 9780769.415518457 8523696.326008087 9169985.622423429 8604269.9060621 8382507.401859147 8147296.131956579 1.218385248295556 1.085772787282827 1.0706942120647713 1.1006664246639724 1.200492685807113 1.0461994001390391 1.1255250176135736 1.0560890099861606 1.0288698564644023 1.0 22.957889916491137 -7.54455799277465 0.9911680267362736 0.9983016543425464 1.1228072811595602 0.43652203747577367 0.05049840758705504 0.5186438728702872 0.9625605038611583 0.04655526703639002 0.01703343493675862 2.8539213948038562e-08 7.54455799277465 0.12450562681701383 RGS(ph)SS(ph)DEEGGPK ddPTM_KYSE-520_SHP099_60min_R1 5 RGSSSDEEGGPK 12 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 2 RGS(0.898)S(0.115)S(0.987)DEEGGPK;RGS(1)S(0.002)S(0.999)DEEGGPK;RGS(0.979)S(0.032)S(0.989)DEEGGPK;RGS(0.998)S(0.066)S(0.936)DEEGGPK;RGS(0.995)S(0.492)S(0.513)DEEGGPK 181.51 1.0952e-07 3952680000.0 5637620.0 4365400.0 4417770.0 5653990.0 5072700.0 5543650.0 6325000.0 4562120.0 6189050.0 4973680.0 True False 5324889.980283148 4155679.631401009 4702546.522881922 6191343.509665928 5471892.630285155 5509050.024037447 6964392.72605134 4546295.070526818 5065274.533254088 4929617.06466449 1.0801832901894095 0.8430025247171699 0.9539374886925377 1.255948165638564 1.1100035882112829 1.1175411703936062 1.4127654612306761 0.9222410201219634 1.027518865423035 1.0 22.233044150944274 -5.17302493375959 9.503565630253581 1.1291170808679385 0.9465931289053283 0.21669598861095885 0.13980097448152426 0.6168458840076387 62.65054000098397 0.038204708687620284 0.06630268347823776 6.713903058899374e-06 5.17302493375959 -0.18252395196261018 RGS(ph)SSDEEGGPK ddPTM_KYSE-520_SHP099_60min_R1 5 RGSSSDEEGGPK 12 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 RGS(0.91)S(0.066)S(0.024)DEEGGPK;RGS(0.962)S(0.029)S(0.009)DEEGGPK;RGS(0.992)S(0.007)SDEEGGPK;RGS(0.959)S(0.041)SDEEGGPK;RGS(0.985)S(0.013)S(0.002)DEEGGPK 179.14 1.2162e-07 8341860000.0 5105260.0 4356190.0 3768234.0 4622970.0 4619860.0 4823610.0 4890480.0 4303740.0 5349480.0 5283540.0 True False 4822061.050716502 4146912.093625507 4011140.3930275757 5062335.678853388 4983416.698592305 4793504.060762724 5384857.44488531 4288811.3304404635 4378149.281416709 5236731.946131921 0.9208149472455405 0.7918893188123934 0.7659625190459441 0.966697499686355 0.9516272266471982 0.915361738976045 1.028285866123585 0.818986225485222 0.8360460925731745 1.0 22.320235328420477 -5.2674081817821765 24.996098962688578 0.9277197925691006 0.8227889666177549 0.3077858506954002 0.07183432330862778 599.0353870691239 2508635.6879309565 0.020806236523373003 0.0317821716773651 5.402463211687297e-06 5.2674081817821765 -0.10493082595134573 RGS(ph)STERPQLGSQVDLGR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSTERPQLGSQVDLGR 18 2 A0A075B6Q3;Q5H9F3-3;H7C4B2;Q5H9F3-2;Q5H9F3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 RGS(0.958)S(0.04)T(0.002)ERPQLGSQVDLGR 95.13799999999999 0.00078956 584120000.0 175690.0 147990.0 166740.0 180250.0 146310.0 201000.0 219730.0 213760.0 247130.0 204140.0 True False 165944.12547066816 140880.3382624813 177488.32719343257 197380.9058058616 157823.76460997507 199745.48444283588 241942.45275814438 213018.51645195918 202257.4216403299 202331.47841851693 0.8201597041040616 0.6962848260865979 0.8772155898861324 0.9755323657428371 0.7800257569586927 0.9872190229820197 1.195772672889254 1.0528194530923973 0.9996339829137518 1.0 17.626361264058193 -6.441298670063384 4.7068035555463705 1.069854519428219 0.8345623503841549 0.6329631768307504 0.08396129848861483 0.1513072736355119 5.955485997710069 0.032299831122736024 0.027861128659096384 3.619939647538461e-07 6.441298670063384 -0.23529216904406403 RGS(ph)VSS(ph)VSPKPPSSFK ddPTM_KYSE-520_SHP099_60min_R1 2 RGSVSSVSPKPPSSFK 16 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 2 RGS(0.995)VS(0.005)S(0.956)VS(0.044)PKPPSSFK;RGS(0.999)VS(0.003)S(0.749)VS(0.249)PKPPSSFK 136.46 1.1723e-05 1979450000.0 1395680.0 1216140.0 1075860.0 1248250.0 1209740.0 1365680.0 1377180.0 1590660.0 1826850.0 1548070.0 True False 1318258.848180897 1157714.8089366443 1145211.657036862 1366883.3046999532 1304939.6555209574 1357156.2845467264 1516398.7943815652 1585142.3717228342 1495140.0911408444 1534355.3041802368 0.8591613980082703 0.7545285018290983 0.7463797035255252 0.890851878294409 0.850480753685764 0.8845123947818704 0.9882970327995411 1.0330999393714297 0.974441895607521 1.0 20.549201169651628 -6.391484684811888 0.9708393193120335 1.0132282156794379 0.7939006283607217 0.7977499070094555 0.042717674921703995 0.2350278839748384 0.46412738999636355 0.027403837599770154 0.022018115049132914 4.0598998004246047e-07 6.391484684811888 -0.21932758731871616 RGS(ph)VSSVS(ph)PKPPSSFK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSVSSVSPKPPSSFK 16 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 2 RGS(0.912)VS(0.144)S(0.275)VS(0.553)PKPPS(0.054)S(0.063)FK 70.452 0.015829 1026200000.0 562540.0 436540.0 455470.0 499380.0 460500.0 551350.0 526850.0 638040.0 746770.0 612640.0 True False 531334.7848043123 415567.96314010106 484830.324977767 546840.9250559288 496738.73011341324 547908.8201371025 580109.1395604988 635826.7881596555 611175.3925397531 607212.4862267083 0.8750392932564526 0.6843863928465809 0.798452495584472 0.9005758897582365 0.8180640902169316 0.9023345740827466 0.9553643126895611 1.0471240341429076 1.0065263913422973 1.0 19.211841931909788 -6.490357433800937 0.8634624125422853 1.0299404805038344 0.7880843711577898 0.7253293661074739 0.05501382453511716 0.3072498057142439 0.4769293378153614 0.03916057213469534 0.02919228602262229 3.233274418798905e-07 6.490357433800937 -0.2418561093460445 RGS(ph)VSSVSPKPPSSFK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSVSSVSPKPPSSFK 16 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 RGS(0.987)VS(0.006)S(0.006)VS(0.001)PKPPSSFK 65.454 0.019984000000000002 1266300000.0 1348800.0 1128500.0 1014300.0 1296400.0 1099100.0 1173200.0 1228600.0 1529200.0 1613400.0 1564600.0 True False 1273979.37523386 1074285.166086966 1079683.4009373812 1419609.466223127 1185592.916976445 1165877.6236235555 1352798.8779805026 1523895.5621179643 1320447.230504222 1550738.8612403818 0.8215305665422278 0.6927569772951216 0.6962380500826426 0.9154406984343134 0.764534214373225 0.7518207305974204 0.872357630154729 0.9826899939162248 0.851495544161473 1.0 20.564524331576433 -7.143277235994178 0.5808734334628456 0.99082710824213 0.7504664966553264 0.5166606431682543 0.07249352018785402 0.6490355300760093 0.45729346156434714 0.07154061477429628 0.04398011410244111 7.189898574948063e-08 7.143277235994178 -0.24036061158680366 RGS(ph)WREEEDR ddPTM_KYSE-520_SHP099_60min_R1 2 RGSWREEEDR 10 2 Q86UK7-2 Q86UK7-2 1 RGS(1)WREEEDR;RGS(1)WREEEDR 88.087 0.0029984 67820000.0 70629.0 63480.0 57950.0 60314.0 60135.0 66605.0 59145.0 70383.0 78053.0 59782.0 True False 66711.06857457908 60430.3255145774 61685.54972327836 66046.22442593456 64867.28237865389 66189.29348912975 65123.95379957423 70138.8578005157 63880.54275600975 59252.37798969222 1.1258800209872488 1.019880172996434 1.041064541477296 1.1146594730328667 1.0947625155219671 1.1170740438576878 1.0990943487686426 1.1837306818760478 1.0781093506006234 1.0 15.854585434743342 -5.26798437299801 24.485047586737508 1.106539702539403 1.058035437763882 0.08037780677805384 0.049834930313047025 676.802108171059 2531948.1262949775 0.013308559068265134 0.020248207284524585 5.395300358063576e-06 5.26798437299801 -0.048504264775520944 RGSAS(ph)GSEPAGDSDR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSASGSEPAGDSDR 15 1 P50747;A0A0C4DG27 P50747 HLCS Biotin--protein ligase;Biotin--[methylmalonyl-CoA-carboxytransferase] ligase;Biotin--[propionyl-CoA-carboxylase [ATP-hydrolyzing]] ligase;Biotin--[methylcrotonoyl-CoA-carboxylase] ligase;Biotin--[acetyl-CoA-carboxylase] ligase 1 RGS(0.334)AS(0.501)GS(0.166)EPAGDSDR 88.565 0.0014672 0.0 87470.0 99663.0 96876.0 67448.0 79399.0 94564.0 88342.0 76675.0 116960.0 78473.0 True False 82617.86473287802 94875.03988278705 103120.78196708052 73858.2376410194 85647.24958148734 93973.79099926536 97272.47149483456 76409.03232107956 95723.01232166472 77777.7902710702 1.062229518798866 1.2198217454125364 1.3258384123242024 0.949605759994075 1.1011787463103617 1.2082342616285324 1.250645861187644 0.9824016863269031 1.230724246446859 1.0 16.24707062678937 -13.506115228012792 0.3253068466104839 2.378169469703672e-10 1.154036486047315 0.12274724714803786 0.11615522950847884 534.1354263827733 6.423952133675303 364.17596879794525 0.1024326595490862 3.1180621828906976e-14 13.506115228012792 1.154036485809498 RGSDPAS(ph)GEVEASQLR ddPTM_KYSE-520_SHP099_60min_R1 2 RGSDPASGEVEASQLR 16 1 Q8WWA1-3;Q8WWA1-2;Q8WWA1 Q8WWA1-3 TMEM40 Transmembrane protein 40 1 RGS(0.001)DPAS(0.999)GEVEASQLR;RGS(0.161)DPAS(0.832)GEVEAS(0.007)QLR 240.45 4.5390000000000003e-23 3635700000.0 1352530.0 1352210.0 1230570.0 1602640.0 1417850.0 1451920.0 1508480.0 1767490.0 1981970.0 1278380.0 True False 1277502.46469829 1287247.8018914096 1309894.5111816165 1754954.4237487125 1529426.7285370338 1442858.0287176236 1660971.879746078 1761358.9897252682 1622094.2093978259 1267054.54776459 1.0082458304199553 1.0159371624232325 1.0338106701819643 1.3850661969091254 1.2070725220436134 1.138749733595287 1.3108921653581997 1.3901208853500098 1.2802086636756225 1.0 20.273047204375494 -5.176848207446078 7.658497954660982 1.2574204951005006 1.0167811356297842 0.4669464509525174 0.10973702207235118 0.24459781501577263 19.717816326845547 0.029436911634796382 0.0512472831374798 6.655057199697384e-06 5.176848207446078 -0.24063935947071635 RGSFSS(ph)ENYWR ddPTM_KYSE-520_SHP099_60min_R1 2 RGSFSSENYWR 11 1 Q6P6C2-3;Q6P6C2;K7ER58;Q6P6C2-1 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 RGS(0.041)FS(0.172)S(0.787)ENYWR;RGS(0.174)FS(0.166)S(0.661)ENYWR 196.38 5.597699999999999e-07 12099500000.0 3584500.0 3753100.0 3622300.0 3796700.0 3794000.0 4010900.0 3661100.0 4220800.0 4913700.0 4114900.0 True False 3385660.6394764017 3572795.442482053 3855799.2538849195 4157537.226480521 4092566.215092925 3985866.4853321896 4031199.7168927398 4206159.02994213 4021495.944296885 4078445.18734376 0.8301351333549342 0.8760189921318937 0.9454091146916095 1.0193926939075213 1.003462355652832 0.9773004913002482 0.9884158133110058 1.0313143457204454 0.9860365309742055 1.0 21.959587832299576 -4.790454286729644 1.9748838268353772 1.0009038025490515 0.8330629070258272 0.9307397757634314 0.016156144275619174 0.08404066413684219 0.6203352845136039 0.004703969204608989 0.01753301491484398 1.6201145160685087e-05 4.790454286729644 -0.16784089552322434 RGSGDTS(ph)SLIDPDTSLSELR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSGDTSSLIDPDTSLSELR 20 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 RGS(0.242)GDT(0.112)S(0.322)S(0.322)LIDPDT(0.002)SLSELR 98.804 0.00025762 1502400000.0 839780.0 809620.0 734450.0 732950.0 735120.0 790910.0 759540.0 787290.0 891560.0 754460.0 True False 793195.7293400741 770724.6399356042 781793.8221615498 802609.3476305474 792969.7617393548 785973.637316832 836321.7155960529 784559.0747448672 729675.1783986256 747776.0713609984 1.0607396515061107 1.0306890918999827 1.0454918953726842 1.0733284714095612 1.0604374653177937 1.0510815569242695 1.1184119787009177 1.0491898641754094 0.9757936986009352 1.0 19.512246780506977 -7.689283530249207 5.515436030564455 0.9882244431294781 1.0622104619314954 0.6327998236220447 0.022452799883459558 0.12363069734338282 6.536514799998133 0.017060935070233162 0.00599584146632833 2.0451090461950942e-08 7.689283530249207 0.07398601880201727 RGSGDTSSLIDPDTS(ph)LSELR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSGDTSSLIDPDTSLSELR 20 1 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 RGS(0.115)GDT(0.115)S(0.115)S(0.115)LIDPDT(0.149)S(0.195)LS(0.195)ELR 53.773 0.06299199999999999 257240000.0 359200.0 328230.0 243630.0 308180.0 314670.0 262540.0 294380.0 282450.0 344010.0 302680.0 True False 339274.4599525524 312461.3381167256 259334.77962178242 337469.3345423042 339432.7387726117 260901.39047573155 324138.80327193625 281470.2468743258 281546.4557863873 299998.49068147637 1.1309205562396556 1.0415430337897322 0.8644536145254521 1.1249034412663514 1.1314481549609017 0.8696756769778012 1.0804681134749137 0.9382388765854727 0.9384929075703901 1.0 18.19459571685188 -7.279571451818176 24.522190704026155 0.9537744088993052 1.0293177593566105 0.11830020966865418 0.09377294457274596 1531.2222446934552 2070843.2318899976 0.05148436175830196 0.024828427732237736 5.253255793913306e-08 7.279571451818176 0.07554335045730531 RGSIS(ph)SMSSVSSVLDEKDDDRIR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSISSMSSVSSVLDEKDDDRIR 23 3 Q9H1K0 Q9H1K0 RBSN Rabenosyn-5 1 RGS(0.235)IS(0.382)S(0.382)MSSVSSVLDEKDDDRIR 189.66 6.389899999999999e-15 851610000.0 239760.0 198980.0 216060.0 191100.0 216480.0 179510.0 156180.0 178150.0 264480.0 147080.0 True False 226460.0348502892 189420.70212493103 229987.57330822293 209262.08654368971 233515.74439728918 178389.61150414636 171968.19856991284 177532.0392305226 216457.0989982378 145776.98562650837 1.5534690464137932 1.2993868772279402 1.577667231352063 1.4354946745835104 1.6018697560091832 1.2237158748857244 1.179666308991382 1.217833106285879 1.4848509733409994 1.0 17.15340344826292 -6.277951958999333 24.385341066616736 1.23223110633413 1.4842339711254542 0.49961509882432453 0.13590304731911848 540.9293839437911 798827.5117473304 0.04600569759027947 0.04069720969835163 5.272881860208545e-07 6.277951958999333 0.25200286479132417 RGSLEMSS(ph)DGEPLSR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSLEMSSDGEPLSR 15 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 RGS(0.126)LEMS(0.096)S(0.702)DGEPLS(0.077)R 206.13 4.5305e-12 879590000.0 567060.0 515690.0 455200.0 518530.0 448770.0 530660.0 497710.0 534340.0 637000.0 522630.0 True False 535604.0513939159 490915.47833352897 484542.9203457509 567810.9352982705 484085.6458479842 527347.9541016681 548023.3839815046 532486.4992558935 521336.85746323847 517999.90479998686 1.0339848452302833 0.9477134528105446 0.9354112150519516 1.096160308209935 0.9345284455890048 1.0180464305399646 1.0579603951724867 1.0279664037032985 1.006441994742335 1.0 18.982592307204627 -6.502546161383312 24.790482382061903 1.0272199775680164 0.9887627318824013 0.10066350698306059 0.04813548232098995 1497.0986803732633 1825338.6690006976 0.016859960837889317 0.014698195720065536 3.1437922472084074e-07 6.502546161383312 -0.03845724568561515 RGSLEMSSDGEPLS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RGSLEMSSDGEPLSR 15 1 Q6ZN18-2;Q6ZN18 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 RGS(0.014)LEMS(0.161)S(0.093)DGEPLS(0.733)R 181.87 3.4344999999999997e-09 531650000.0 308750.0 321270.0 268850.0 292620.0 289800.0 314160.0 295170.0 304550.0 353690.0 302510.0 True False 291623.022022134 305835.7069638984 286180.50117520936 320430.51682058885 312605.61126355524 312199.2109082653 325008.6641815931 303493.5871325042 289468.8117993293 299829.9967492184 0.9726279064267582 1.020030384817378 0.9544758839275657 1.0687073351389889 1.0426095275751297 1.0412540916291064 1.0839764790226591 1.0122188921155548 0.9654431342353137 1.0 18.193785200606065 -5.25944411072733 24.99982279093833 1.0342786400870998 0.9861432922929875 0.2750951649591339 0.035365354040667984 239.7856076010882 3004372.9017952858 0.010003013690921433 0.016265985403330366 5.502447268418004e-06 5.25944411072733 -0.048135347794112326 RGSLQAYT(ph)FEEQPTLPVLLPTSSGLPPGWEEK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSLQAYTFEEQPTLPVLLPTSSGLPPGWEEK 32 1 H0Y8X6;P46934-4;P46934-3;P46934-2;P46934 H0Y8X6 NEDD4 E3 ubiquitin-protein ligase NEDD4 1 RGS(0.261)LQAY(0.286)T(0.376)FEEQPT(0.077)LPVLLPTSSGLPPGWEEK 71.068 0.014487 83361000.0 54107.0 66600.0 65434.0 48190.0 59986.0 62585.0 60498.0 73646.0 83158.0 62152.0 True False 51105.576850369594 63400.436031362005 69651.98033810178 52769.963111148216 64706.556926347905 62194.38380027298 66613.7282435817 73390.53921510557 68058.6034425871 61601.38163352432 0.8296173802465047 1.0292047734990837 1.130688606182109 0.8566360317222184 1.0504075592215891 1.0096264426385193 1.0813674381506015 1.1913781358300808 1.1048226782879278 1.0 15.910675088480673 -6.715919851602538 2.2501064060371907 1.114892203898531 0.985175473420884 0.24867245990340947 0.09348987604758642 0.41646063231532493 4.313413289619001 0.043840930070101716 0.029643860636515494 1.923446665364624e-07 6.715919851602538 -0.12971673047764698 RGSLS(ph)NAGDPEIVK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSLSNAGDPEIVK 14 1 F5H7V1;O43847;O43847-2 F5H7V1 NRD1 Nardilysin 1 RGS(0.416)LS(0.584)NAGDPEIVK 104.89 0.00048659 8583600000.0 12730000.0 11753000.0 11631000.0 11130000.0 11244000.0 12244000.0 11759000.0 11311000.0 13122000.0 11979000.0 True False 12023841.523374133 11188368.238387348 12380752.87025799 12187791.853643468 12128838.830391373 12167580.654318811 12947714.476780675 11271764.781007249 10739375.578701133 11872875.379520968 1.0127152133773392 0.9423469783642893 1.0427762841352686 1.0265240275886065 1.0215586740943905 1.0248217272882496 1.0905289631114679 0.9493711018351503 0.9045303041944699 1.0 23.501166034188554 -7.432178065924908 12.29652633129273 0.9438397226183688 1.0208202218716491 0.3946762778735302 0.04038993851001089 0.8382598114724786 111.18136889245477 0.022292124918125846 0.010700955620179716 3.6967657689085295e-08 7.432178065924908 0.07698049925328032 RGSLS(ph)QEMAK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSLSQEMAK 10 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RGS(0.017)LS(0.983)QEMAK 152.02 0.00014808 652510000.0 687840.0 581380.0 489930.0 522390.0 573460.0 717180.0 873530.0 968600.0 956270.0 872110.0 True False 649684.1440249545 553449.6321308294 521511.6717157162 572037.78853772 618588.0394589317 712703.8135955863 961834.9372312456 965240.15267294 782635.4736049792 864383.7838913135 0.7516153774891328 0.6402822940977563 0.6033334745915252 0.6617868118285376 0.7156404955610691 0.8245224249662704 1.1127406079984785 1.1166800796835727 0.9054259094052912 1.0 19.721312481480332 -6.505925489140285 2.665173299097172 1.0427827528979454 0.666848036401078 0.853692086384305 0.06964614241216252 0.09858608625969677 1.407360414668433 0.029210303036108443 0.02322920510281191 3.1194247303840373e-07 6.505925489140285 -0.3759347164968674 RGSLT(ph)LTISGESPK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSLTLTISGESPK 14 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RGS(0.356)LT(0.643)LT(0.001)ISGESPK 119.08 0.00048687 0.0 189850.0 171880.0 156550.0 157610.0 176040.0 152020.0 146160.0 161460.0 191650.0 175090.0 True False 179318.64204340766 163622.62680286006 166641.46348885642 172589.20701282562 189893.34646941422 151071.18679104408 160935.27918413683 160899.93294504716 156851.19110334333 173538.8388179586 1.0333055312852015 0.9428588315869706 0.9602545725436281 0.9945278428068247 1.094241195589717 0.8705324284756626 0.9273732628403556 0.9271695837139396 0.9038391185034923 1.0 17.404899055392608 -6.284570478625916 24.99799074015231 0.9213303818829902 0.9985114180356425 0.3897629765447834 0.04908909630718017 882.587113844522 953816.9215764372 0.017352958796937386 0.015314778766674173 5.193133909160073e-07 6.284570478625916 0.07718103615265226 RGSMNNELLS(ph)PEFGPVRDPLADGVEGLGR ddPTM_KYSE-520_SHP099_60min_R1 2 RGSMNNELLSPEFGPVRDPLADGVEGLGR 29 2 O00562-2;O00562 O00562-2 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 1 RGS(0.039)MNNELLS(0.961)PEFGPVRDPLADGVEGLGR;RGS(0.033)MNNELLS(0.967)PEFGPVRDPLADGVEGLGR 180.69 4.8472000000000006e-11 1703770000.0 244508.0 232311.0 175315.0 218810.0 224568.0 204090.0 162192.0 182153.0 271548.0 190109.0 True False 230944.65382538587 221150.43085407978 186616.08541391764 239605.63661237436 242240.2239828646 202816.19860665823 178587.9502013784 181521.15375782977 222241.72836801794 188424.78216256388 1.2256596567331461 1.1736801726180677 0.9904009614452637 1.271624856679702 1.2856070268605717 1.0763775140346354 0.9477943832637752 0.9633613565821826 1.17947186042799 1.0 17.52362919921636 -6.511351658411745 22.656184085086775 1.0185296774728334 1.1819304644384687 0.40632792783218363 0.09578649924106748 174.6551971746936 343284.0450782088 0.03636343393846489 0.03027742263432298 3.080692431244356e-07 6.511351658411745 0.16340078696563531 RGSPT(ph)TGFIEQK ddPTM_KYSE-520_SHP099_60min_R1 2 RGSPTTGFIEQK 12 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RGS(0.327)PT(0.663)T(0.01)GFIEQK;RGS(0.084)PT(0.915)T(0.001)GFIEQK 192.4 8.6783e-08 9088400000.0 6009300.0 5412300.0 4854260.0 4710360.0 5157530.0 4875860.0 4798660.0 5018320.0 5817800.0 4840830.0 True False 5675952.149757438 5152284.983972075 5167173.366690611 5158031.19817863 5563398.268668472 4845427.949131573 5283755.383208465 5000912.619204696 4761434.174803188 4797944.012308746 1.1829967451050352 1.0738526691337573 1.0769557446761855 1.0750503100799238 1.1595379717637417 1.0098967259103089 1.1012540725055167 1.0423032462186408 0.9923905244805078 1.0 22.193984892100207 -7.185119551177758 0.5956894519847084 0.990153629904043 1.1112546978177678 0.4672887924785397 0.04447622144771811 0.7365491877592957 0.5422401311259424 0.04196592547789522 0.024669753810668972 6.52950785729205e-08 7.185119551177758 0.12110106791372477 RGSS(ph)AWLLEELLRPDCPEPAGLDATR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSAWLLEELLRPDCPEPAGLDATR 26 2 Q5VV17 Q5VV17 OTUD1 OTU domain-containing protein 1 1 RGS(0.459)S(0.541)AWLLEELLRPDCPEPAGLDATR 58.137 0.035713 50611000.0 20981.0 24933.0 17556.0 16475.0 20158.0 13739.0 21904.0 30562.0 32995.0 20212.0 True False 19817.14210541342 23735.181254804014 18687.687850593175 18040.779046610634 21744.31991666926 13653.249804776708 24118.270082439325 30455.98755522443 27003.93973626305 20032.93740469804 0.9892279751628428 1.1848078379777565 0.9328481127391042 0.9005558537002061 1.085428436050016 0.6815400821636274 1.2039307863450524 1.5202956481100978 1.3479770435428107 1.0 14.290086356790216 -6.989655901007913 24.755741369046557 1.3329044838924438 0.9713472797005851 0.430640779396705 0.17191552836147242 152.14425815503031 364114.00772335223 0.06972439098127214 0.046950305627513456 1.0241040862085053e-07 6.989655901007913 -0.36155720419185866 RGSS(ph)FQSGR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSFQSGR 9 1 Q96KP1 Q96KP1 EXOC2 Exocyst complex component 2 1 RGS(0.011)S(0.989)FQSGR 142.12 0.00058892 0.0 756360.0 601220.0 492990.0 553110.0 586860.0 679870.0 682000.0 593640.0 732690.0 647280.0 True False 714403.2030337206 572336.488750381 524768.9242118897 605677.4081014151 633042.5432233616 675626.6791450289 750943.2156785792 591580.8013966182 599651.9656118366 641545.6027762204 1.1135657386508717 0.8921212868947362 0.8179760284241806 0.9440909663793353 0.986745977969356 1.0531233886123235 1.1705219588895197 0.9221180830117379 0.9346988943839791 1.0 19.291192294016387 -5.860702249713509 3.4181453851043804 1.020574001079445 0.9289534900912373 0.11370093727236086 0.09436684264101204 0.47933945660971033 10.997172517368114 0.03223166235530066 0.037706856173810956 1.3781540010773156e-06 5.860702249713509 -0.09162051098820778 RGSS(ph)GS(ph)VDETLFALPAASEPVIR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSGSVDETLFALPAASEPVIR 23 1 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 2 RGS(0.603)S(0.643)GS(0.678)VDET(0.077)LFALPAASEPVIR 116.04 3.6056e-05 87017000.0 92208.0 86189.0 70091.0 78938.0 75994.0 94899.0 77089.0 88912.0 107430.0 86542.0 True False 87093.03842790921 82048.3510676735 74609.1780095651 86440.2437864249 81974.2954532871 94306.70014000332 84881.90843613783 88603.58502421677 87923.42008991477 85775.30520865723 1.0153626176677129 0.9565498002960464 0.8698211895378353 1.007752098067738 0.9556864327544649 1.0994621343589812 0.9895844524208207 1.032973124475389 1.0250435119529104 1.0 16.388274733788897 -6.1938103792673385 24.998370222464402 1.028984434768682 0.9583132021723377 0.357593512527566 0.045750075553083 200.32325744982913 74047.03620999139 0.015004588088364319 0.015004587624701771 6.400142161322383e-07 6.1938103792673385 -0.07067123259634434 RGSS(ph)GSVVVDLLYWR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSGSVVVDLLYWR 15 1 Q9NQC3-2;F8W914 Q9NQC3-2 RTN4 Reticulon-4;Reticulon 1 RGS(0.308)S(0.685)GS(0.007)VVVDLLYWR 123.08 0.00017273 132070000.0 120770.0 160540.0 127990.0 162010.0 128290.0 116670.0 120340.0 122980.0 161090.0 68241.0 True False 114070.6473509736 152827.41742454717 136240.44019124078 177407.38168991715 138385.69312974982 115941.81925346084 132505.1416052203 122553.41108374769 131840.11674843507 67636.43783069456 1.6865265382028503 2.259542671468004 2.014305373861847 2.622955722978756 2.0460227884288145 1.7141916838329485 1.959079245670848 1.8119436063519432 1.9492468997029853 1.0 16.045513059709542 -9.576469818407066 0.34452278846256434 0.6392508851053582 2.135815036246203 0.6035840493295233 0.25103294578905877 6.36549415298692 0.7458645487857657 2.8337331100463903 0.22738811019106125 2.6517353707744907e-10 9.576469818407066 1.4965641511408447 RGSS(ph)PDVHALLEITEESDAVLVDK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSPDVHALLEITEESDAVLVDK 24 1 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 1 RGS(0.42)S(0.579)PDVHALLEIT(0.001)EESDAVLVDK 158.12 2.1452e-08 213090000.0 119460.0 143360.0 150950.0 238100.0 138970.0 128770.0 130000.0 159560.0 184110.0 122340.0 True False 112833.31566239387 136472.77041225304 160680.47852853936 260728.95241262447 149906.14836886237 127966.29866519365 143141.66867773514 159006.52360158408 150680.2650354111 121256.16277907965 0.9305367502678472 1.125491416555025 1.3251324703494707 2.150232585601893 1.2362765317089988 1.0553385142026919 1.1804898439556377 1.3113273581919542 1.2426606745748678 1.0 16.887698547797378 -5.9826769646329705 24.99957807979471 1.1751598185367838 1.4019568707481054 0.10538614493256904 0.3053936954010684 619.4895644552804 894006.1086021281 0.10239330348307935 0.11608002442880355 1.0406939632704947e-06 5.9826769646329705 0.22679705221132163 RGSS(ph)PDVHALLEITEESDAVLVDKS(ph)DS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSPDVHALLEITEESDAVLVDKSDSD 28 2 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 3 RGS(0.503)S(0.491)PDVHALLEIT(0.017)EES(0.032)DAVLVDKS(0.981)DS(0.976)D 58.131 0.028863999999999997 245550000.0 139680.0 128730.0 146550.0 204410.0 134400.0 109290.0 118940.0 177060.0 210460.0 139940.0 True False 131931.67195482313 122545.61757233072 155996.84748829057 223837.0649418923 144976.51536860524 108607.880570933 130963.61594253697 176445.82018611452 172245.76926485568 138700.2404716726 0.9512000232023258 0.8835285155641731 1.1247049533425326 1.6138188670812552 1.045250641783959 0.7830403191919088 0.9442205399008251 1.2721378101875094 1.2418563131477358 1.0 17.081610763374382 -4.768979070183209 22.948892221343627 1.1333413938149557 0.9173642454856541 0.13649027874238995 0.2117263097118716 118.48897116900176 360664.35730329296 0.06080850526489366 0.13115684549043835 1.702240541958997e-05 4.768979070183209 -0.2159771483293016 RGSS(ph)PGSLEIPK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSPGSLEIPK 12 1 Q6GYQ0-2;A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-3 Q6GYQ0-2;Q6GYQ0-3 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 RGS(0.377)S(0.571)PGS(0.052)LEIPK 50.534 0.049852 176130000.0 493740.0 472760.0 431670.0 416540.0 471460.0 451460.0 423860.0 444280.0 489130.0 407710.0 True False 466351.25795371115 450047.8999727725 459496.13889642025 456127.83636268275 508561.2197595442 448642.27067941654 466707.90527495975 442738.8963757315 400316.3219638834 404098.00659358024 1.154054834085687 1.1137097749294422 1.1370908329140965 1.128755472484751 1.258509597823944 1.1102313383362876 1.1549374103801238 1.095622569653045 0.9906416647249136 1.0 18.6243457091934 -7.613704805805883 2.681725100377687 0.9914406595627733 1.1506708754707453 0.7075966074029114 0.03954391921728158 0.15403849392148714 2.077324113404022 0.03439070357078676 0.010768246440731865 2.433857763827938e-08 7.613704805805883 0.15923021590797204 RGSSAAASPGS(ph)PPPGR ddPTM_KYSE-520_SHP099_60min_R1 2 RGSSAAASPGSPPPGR 16 1 Q86UX6 Q86UX6 STK32C Serine/threonine-protein kinase 32C 1 RGSSAAASPGS(1)PPPGR;RGSSAAASPGS(1)PPPGR 76.027 0.0087928 435180000.0 217394.0 206550.0 193674.0 130356.0 169192.0 214199.0 168315.0 178356.0 219027.0 151310.0 True False 205334.72145580495 196627.0279621292 206158.53592935647 142744.99504703953 182506.44782920444 212862.104587915 185329.92279610017 177737.32466460316 179257.21802135123 149969.5111173986 1.3691764407704548 1.3111133489540174 1.3746696538069807 0.9518267678774814 1.2169570099240732 1.4193691971248947 1.2357840031299487 1.1851563917246317 1.1952910740705538 1.0 17.19430970428708 -13.999999996240811 0.1296076956121372 0.16953017514961405 1.3536013440810646 0.3123329219181096 0.12195258728544996 202.458488511709 1.654879872795644 43.682969622411115 1.0060853610869496 1.0000000086558515e-14 13.999999996240811 1.1840711689314505 RGSSGS(ph)VDET(ph)LFALPAASEPVIR ddPTM_KYSE-520_SHP099_60min_R1 2 RGSSGSVDETLFALPAASEPVIR 23 1 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 2 RGS(0.352)S(0.352)GS(0.648)VDET(0.648)LFALPAASEPVIR;RGS(0.231)S(0.364)GS(0.482)VDET(0.923)LFALPAASEPVIR 132.69 1.842e-05 867342000.0 415865.0 340663.0 245279.0 393683.0 330487.0 336030.0 308404.0 378340.0 393559.0 242799.0 True False 392796.1394436758 324297.0381344123 261090.07680027603 431098.5139548903 356494.44668619236 333932.7121260004 339580.48605298676 377027.62684521993 322098.60641503066 240647.9897547638 1.6322435929922416 1.3475991985841744 1.084946012083226 1.7914070854870143 1.4813938277626326 1.3876397324835328 1.411108758477649 1.5667183724635971 1.338463731790448 1.0 17.876564846283348 -8.044151430111825 10.595212402367212 1.0000001191538985 1.4537302701411083 0.38343968935981376 0.17688264896069517 2.9232852466731214 702.0537993509117 0.1708681685699888 0.044135453733815284 9.033344435005509e-09 8.044151430111825 0.4537301509872098 RGSSGSVDET(ph)LFALPAASEPVIR ddPTM_KYSE-520_SHP099_60min_R1 1 RGSSGSVDETLFALPAASEPVIR 23 1 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 1 RGS(0.209)S(0.209)GS(0.209)VDET(0.372)LFALPAASEPVIR 99.999 0.0031891 258980000.0 58786.0 60020.0 46090.0 57678.0 52315.0 60796.0 58616.0 65823.0 77835.0 47425.0 True False 55525.023393014315 57136.549108143285 49061.035146607406 63159.69977847699 56431.892868367526 60416.54961286886 64541.47731703174 65594.67537620374 63702.12606067687 47004.85139609167 1.181261545220651 1.2155457875332 1.043744075120865 1.3436847028034336 1.2005546489837364 1.2853258295353815 1.373081190559794 1.395487347113659 1.3552244963798254 1.0 15.520522045358463 -5.278082343156939 24.615096984852205 1.296438488428808 1.1537199879902247 0.2029870569425256 0.11629335511903238 913.6062986073468 1351230.3178490584 0.03182967695099672 0.04737282786355066 5.271299069964617e-06 5.278082343156939 -0.14271850043858336 RGSVSSVS(ph)PKPPSSFK ddPTM_KYSE-520_SHP099_60min_R1 1 RGSVSSVSPKPPSSFK 16 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 RGS(0.018)VS(0.286)S(0.286)VS(0.409)PKPPSSFK 72.09 0.01384 723780000.0 637990.0 578570.0 485680.0 459880.0 506160.0 470330.0 399550.0 411680.0 560140.0 483050.0 True False 602599.4228984661 550774.6287487248 516987.7099154761 503586.85693203623 545991.9123435507 467394.4960099451 439940.41323222395 410251.9781668343 458432.6959803118 478770.55280721275 1.2586392779697873 1.1503937022010333 1.0798235331813573 1.0518333969775628 1.1404041228981059 0.9762390215301139 0.91889614065169 0.8568864057352146 0.9575206605593172 1.0 18.868974895253185 -5.224819850807902 0.5001442699432334 0.9147339644952078 1.2884010228030185 0.73657669429382 0.05906880247463917 1.0256075336925783 0.3822426334722209 0.04732201052989766 0.2048688723532022 5.9590928070812585e-06 5.224819850807902 0.37366705830781066 RGT(ph)FEK ddPTM_KYSE-520_SHP099_60min_R1 2 RGTFEK 6 1 Q9C0H5;Q9C0H5-2 Q9C0H5 ARHGAP39 Rho GTPase-activating protein 39 1 RGT(1)FEK;RGT(1)FEK 83.948 0.033411 1812370000.0 2053910.0 2184820.0 1994340.0 2117170.0 2309410.0 2054530.0 2179510.0 2223920.0 2683700.0 2289500.0 True False 1939975.517931924 2079857.9677183237 2122898.347456821 2318385.20024963 2491147.4282545475 2041706.9161807927 2399836.1407677745 2216205.7405868326 2196407.730571575 2269216.811204045 0.8549097240746133 0.9165532167086107 0.9355202803783267 1.0216675589581483 1.0978005345080915 0.8997407854992332 1.0575614145456744 0.9766390455264233 0.9679144450750664 1.0 21.113763026507897 -4.834036126834247 1.9136139023178287 1.0030989273545214 0.8689393603028295 0.46539839029483243 0.05157968269964262 0.3244742148281381 2.261759407322625 0.014653172519341173 0.051885983479394195 1.4654259342680397e-05 4.834036126834247 -0.13415956705169196 RGT(ph)FSDQELDAQSLDDEDDNMHHAVYPAVNR ddPTM_KYSE-520_SHP099_60min_R1 1 RGTFSDQELDAQSLDDEDDNMHHAVYPAVNR 31 1 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 RGT(0.57)FS(0.43)DQELDAQSLDDEDDNMHHAVYPAVNR 119.96 0.00014626 988960000.0 96152.0 72125.0 71166.0 80616.0 89739.0 76702.0 91795.0 85500.0 110540.0 81408.0 True False 90818.25688573993 68660.00673816784 75753.47422962594 88277.72040191585 96800.948754935 76223.27436683774 101074.53443286693 85203.4204558501 90468.72248663493 80686.78845446558 1.125565394599785 0.8509448455358354 0.9388584634568311 1.094078994750598 1.1997125007591944 0.9446809797102438 1.252677623795956 1.055977342609607 1.1212334041240177 1.0 16.30004484745662 -5.270690267342094 19.464347464726703 1.1024223014539907 0.9597051059215381 0.22217153407009238 0.10477037487151128 40.229924133917514 84648.03165562135 0.027814403988774997 0.04223624440402573 5.361789163762477e-06 5.270690267342094 -0.14271719553245255 RGT(ph)GQS(ph)DDS(ph)DIWDDTALIK ddPTM_KYSE-520_SHP099_60min_R1 5 RGTGQSDDSDIWDDTALIK 19 1 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 3 RGT(1)GQS(1)DDS(1)DIWDDTALIK;RGT(1)GQS(1)DDS(1)DIWDDTALIK;RGT(1)GQS(1)DDS(1)DIWDDTALIK;RGT(1)GQS(1)DDS(1)DIWDDTALIK;RGT(1)GQS(1)DDS(1)DIWDDTALIK 152.16 7.064699999999999e-07 1350085000.0 768335.0 712320.0 673938.0 602249.0 678028.0 660817.0 604337.0 709643.0 879455.0 640925.0 True False 725713.9259121502 678099.0779858821 717381.1218189251 659486.5638872359 731384.9461483978 656692.5959853806 665429.2817207422 707181.414064921 719768.1412564098 635246.9031321051 1.142412379082833 1.067457510839475 1.129294953319496 1.038157857418299 1.1513396484772787 1.033759618106813 1.0475128307431676 1.1132386644911458 1.1330525779938005 1.0 19.27695791150514 -2.406905428855974 1.8166301631610466 1.0824831184930979 47.78820694725406 0.12534226550069838 0.048161745617478054 2611.2025415191756 13.920378412769129 0.012721127424736486 507184.4737267659 0.0039182719136576245 2.406905428855974 46.705723828760966 RGT(ph)GQSDDS(ph)DIWDDTALIK ddPTM_KYSE-520_SHP099_60min_R1 1 RGTGQSDDSDIWDDTALIK 19 1 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 2 RGT(0.586)GQS(0.417)DDS(0.997)DIWDDTALIK 137.89 3.8631e-06 4319700000.0 275870.0 331210.0 302940.0 240770.0 278110.0 275880.0 206980.0 258260.0 371350.0 280770.0 True False 260566.94116678918 315298.17444365437 322467.99712113815 263652.70840985974 299995.6747705569 274158.1305875099 227903.5583301356 257364.15633833705 303922.2009717014 278282.59623575484 0.9363393352347578 1.1330143483947546 1.1587788869410662 0.9474279454633915 1.078025283752949 0.9851788588146174 0.8189644678212674 0.9248302258913232 1.0921351355879447 1.0 18.08619115993174 -6.445736395066899 5.5397535324167135 0.9461672557628739 1.054417003484594 0.17967139880450334 0.09164479600716484 0.3445092449913672 18.437638602741696 0.033659418398599476 0.029259427791217263 3.5831385787350823e-07 6.445736395066899 0.10824974772172025 RGT(ph)GQSDDSDIWDDTALIK ddPTM_KYSE-520_SHP099_60min_R1 3 RGTGQSDDSDIWDDTALIK 19 1 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 RGT(0.5)GQS(0.5)DDSDIWDDTALIK;RGT(0.618)GQS(0.382)DDSDIWDDTALIK;RGT(0.674)GQS(0.326)DDSDIWDDTALIK 265.13 6.3437e-35 5980920000.0 1843610.0 1829910.0 1790850.0 1388370.0 1661030.0 1755600.0 1321160.0 1478450.0 2416290.0 1630240.0 True False 1741341.2781545788 1741998.376849094 1906291.0564613107 1520320.267371339 1791743.611032103 1744642.6491932466 1454715.7460790505 1473321.6020228225 1977552.6457140467 1615797.341907526 1.0776978232300112 1.0781044947088363 1.1797835081290844 0.9409102416126817 1.108891297541599 1.0797410070829876 0.9003082925991752 0.9118232613772567 1.2238865570724675 1.0 20.623814831671655 RGT(ph)S(ph)PRPPEGGLGYSQLGDDDLK ddPTM_KYSE-520_SHP099_60min_R1 3 RGTSPRPPEGGLGYSQLGDDDLK 23 2 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;P21127-5;P21127-4;P21127-12;Q9UQ88-8;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 2 RGT(0.987)S(0.955)PRPPEGGLGY(0.044)S(0.015)QLGDDDLK;RGT(0.976)S(0.675)PRPPEGGLGY(0.064)S(0.286)QLGDDDLK;RGT(0.935)S(0.956)PRPPEGGLGY(0.032)S(0.077)QLGDDDLK 134.11 3.5574e-06 4598480000.0 3704070.0 3181810.0 2914000.0 3585750.0 3441710.0 3459940.0 3595890.0 4159750.0 4021780.0 3539830.0 True False 3498597.853219514 3028951.0716058235 3101841.1025648536 3926538.6019049534 3712552.996348835 3438345.231060426 3959397.6537044714 4145320.7981429487 3291526.1328233927 3508469.86014607 0.9971862357893692 0.8633253789672622 0.8841008263459083 1.1191598498558792 1.0581687015530663 0.9800127600119317 1.1285254859050229 1.1815181442004363 0.938165714408148 1.0 21.742410538175868 -5.255034965091233 24.999999974340714 1.065203211628824 0.9097162615425333 0.42053589457080576 0.07655477926594019 462.5897769460241 1805742.3815231211 0.020778699129814414 0.03492791489191201 5.558595031658594e-06 5.255034965091233 -0.15548695008629065 RGT(ph)SPRPPEGGLGYS(ph)QLGDDDLK ddPTM_KYSE-520_SHP099_60min_R1 1 RGTSPRPPEGGLGYSQLGDDDLK 23 2 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;P21127-5;P21127-4;P21127-12;Q9UQ88-8;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 2 RGT(0.713)S(0.296)PRPPEGGLGY(0.011)S(0.98)QLGDDDLK 126.36 0.00023285 888630000.0 569830.0 437920.0 393350.0 528720.0 454570.0 450260.0 543810.0 550660.0 535720.0 503360.0 True False 538220.3939720578 416881.6658686789 418705.97038225265 578969.3898345352 490342.0728504984 447449.76032453374 598783.6218741477 548749.8889850103 438446.75240220746 498900.6220081541 1.078812834118417 0.8356006135864575 0.8392572626927077 1.160490414912877 0.9828451824269007 0.896871522275273 1.2002062043217117 1.0999182297592756 0.8788258283531293 1.0 18.928392942475313 -5.244976283122721 24.965369713767167 1.0348880612003304 0.9096612818453432 0.16654744647651132 0.11563674129478592 1378.039726579513 2089717.3213943946 0.03157720491770559 0.05447717527728845 5.688839968235013e-06 5.244976283122721 -0.12522677935498716 RGT(ph)SPRPPEGGLGYSQLGDDDLK ddPTM_KYSE-520_SHP099_60min_R1 3 RGTSPRPPEGGLGYSQLGDDDLK 23 2 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;P21127-5;P21127-4;P21127-12;Q9UQ88-8;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 RGT(0.5)S(0.5)PRPPEGGLGYSQLGDDDLK;RGT(0.5)S(0.5)PRPPEGGLGYSQLGDDDLK;RGT(0.5)S(0.5)PRPPEGGLGYSQLGDDDLK 228.15 1.3882999999999998e-21 3435810000.0 1465480.0 1221920.0 1105150.0 1219410.0 1289000.0 1295840.0 1368060.0 1353050.0 1445490.0 1249020.0 True False 1384186.9030380477 1163217.1290606875 1176389.737302521 1335302.3597710158 1390436.9665932474 1287752.181892557 1506356.8557789417 1348356.585354244 1183025.4538375766 1237954.654522857 1.1181240750466364 0.9396282204771261 0.9502688430505842 1.078635921673302 1.1231727765740833 1.0402256473512703 1.2168110118375335 1.0891809166256896 0.9556290688963469 1.0 20.239527039859286 -5.317971723865521 10.36270532057268 1.0825737316212367 0.996406537172203 0.12428693311387551 0.08038707539208215 1.129853063912908 204.15104299566198 0.022709134909476684 0.03371910842611846 4.8087065605613434e-06 5.317971723865521 -0.08616719444903376 RGTGQS(ph)DDS(ph)DIWDDTALIK ddPTM_KYSE-520_SHP099_60min_R1 11 RGTGQSDDSDIWDDTALIK 19 1 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 2 RGT(0.303)GQS(0.704)DDS(0.993)DIWDDTALIK;RGT(0.084)GQS(0.916)DDS(1)DIWDDTALIK;RGT(0.07)GQS(0.93)DDS(1)DIWDDTALIK;RGT(0.094)GQS(0.907)DDS(1)DIWDDTALIK;RGT(0.022)GQS(0.978)DDS(1)DIWDDTALIK;RGT(0.084)GQS(0.92)DDS(0.996)DIWDDTALIK;RGT(0.129)GQS(0.871)DDS(1)DIWDDTALIK;RGT(0.014)GQS(0.986)DDS(1)DIWDDTALIK;RGT(0.003)GQS(0.997)DDS(1)DIWDDTALIK;RGT(0.047)GQS(0.953)DDS(1)DIWDDTALIK;RGT(0.004)GQS(0.996)DDS(1)DIWDDTALIK 249.19 1.3305000000000002e-26 21090180000.0 4476590.0 4431370.0 4282540.0 3772610.0 4178130.0 3942480.0 3328790.0 3715520.0 5287320.0 3944840.0 True False 4228264.62883908 4218480.333578024 4558599.380706275 4131157.7201234438 4506925.0606921995 3917873.519931296 3665296.5790596795 3702631.728328883 4327275.9704906335 3909891.78663908 1.081427532927624 1.0789250863651665 1.1659144624626094 1.0565913190335539 1.1526981580649642 1.0020414205118136 0.9374419495661661 0.9469908453685476 1.106750827549203 1.0 21.89869724820218 -6.339309577680688 6.903479217266205 0.9906732177627815 1.105846594096033 0.5105507483218417 0.052851052481944695 0.2080121063621914 15.752228909868066 0.018467221772460723 0.016269014098589284 4.578154262822971e-07 6.339309577680688 0.11517337633325142 RGTGQS(ph)DDSDIWDDTALIK ddPTM_KYSE-520_SHP099_60min_R1 3 RGTGQSDDSDIWDDTALIK 19 1 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 RGT(0.401)GQS(0.599)DDSDIWDDTALIK;RGT(0.003)GQS(0.985)DDS(0.012)DIWDDTALIK;RGT(0.052)GQS(0.947)DDSDIWDDTALIK 271.81 1.366e-35 4707820000.0 2003110.0 2141840.0 1890370.0 1649560.0 1993420.0 1844440.0 1518920.0 1515510.0 2534740.0 1660720.0 True False 1891993.4951992114 2038942.7914326168 2012226.2748989433 1806333.6864417007 2150290.812991705 1832928.16579972 1672467.2568306562 1510253.0495326938 2074495.111595559 1646007.3128206073 1.149444161312431 1.2387203723528257 1.2224892679551838 1.097403196433166 1.3063677155279185 1.1135601594982005 1.016075228708861 0.9175251153317878 1.2603194988488189 1.0 20.650539314650292 -6.511551516386058 6.933022086471244 1.044326860746161 1.201287873589738 0.366970601293367 0.09585641094066415 0.15565500516838804 40.12443496950373 0.033919012546939256 0.028083374949775083 3.079275053574452e-07 6.511551516386058 0.156961012843577 RGTLVAER ddPTM_KYSE-520_SHP099_60min_R1 2 RGTLVAER 8 1 Q9BR76;A0A087WW53;F5H390 Q9BR76 CORO1B Coronin-1B;Coronin 0 ; 107.21 0.0036470999999999995 510840000.0 490070.0 462690.0 319020.0 334620.0 464980.0 447410.0 326050.0 450340.0 398000.0 363390.0 False True 462884.8401696757 440461.6778881509 339584.53965004755 366422.1841928283 501571.28062569996 444617.5482316875 359010.31594135024 448777.8756501463 325733.23276353034 360170.6473131417 1.285182020308367 1.2229249695220226 0.9428434609631139 1.0173571525784315 1.3925934397136503 1.2344635842718341 0.996778384411813 1.2460145739193655 0.9043858381949972 1.0 18.458321085716292 -7.767755081060734 24.99992576986605 0.9521928347264713 1.1607144611421587 0.2844588879268547 0.136128778599405 227.86692132681063 901940.3651992726 0.12587017563711153 0.03567551780591928 1.70704479988256e-08 7.767755081060734 0.2085216264156874 RGTS(ph)PRPPEGGLGYSQLGDDDLK ddPTM_KYSE-520_SHP099_60min_R1 4 RGTSPRPPEGGLGYSQLGDDDLK 23 2 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;P21127-5;P21127-4;P21127-12;Q9UQ88-8;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88;Q9UQ88-5;Q9UQ88-10 P21127;Q5QPR4 CDK11B;CDK11A Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A 1 RGT(0.166)S(0.833)PRPPEGGLGYSQLGDDDLK;RGT(0.388)S(0.611)PRPPEGGLGYS(0.001)QLGDDDLK;RGT(0.05)S(0.95)PRPPEGGLGYS(0.001)QLGDDDLK;RGT(0.024)S(0.892)PRPPEGGLGYS(0.084)QLGDDDLK 152.2 2.5644000000000004e-07 9408100000.0 1653050.0 1358920.0 1307860.0 1410090.0 1392000.0 1414820.0 1516900.0 1550830.0 1591030.0 1271860.0 True False 1561352.0212265232 1293635.443419496 1392166.7482499883 1544104.5296409815 1501542.4806034134 1405989.5835791668 1670243.0555173578 1545450.5326964434 1302139.0586024115 1260592.3098921084 1.2385860273573748 1.0262123870406727 1.1043750920304607 1.2249039737305223 1.191140441537302 1.1153404415893213 1.3249668766108136 1.2259717281860265 1.0329581168981263 1.0 20.265670336189743 -3.8994239009910827 19.977283886392872 1.1526206877708334 10.023398707184832 0.0678700487631021 0.09954945901088837 1590.2817071161369 315728.04920742783 0.024140466487879632 301.36356364479536 0.00012605965058643754 3.8994239009910827 8.870778019413999 RGVTIKPTVDDD ddPTM_KYSE-520_SHP099_60min_R1 2 RGVTIKPTVDDD 12 2 Q2VIR3;P41091 Q2VIR3 EIF2S3L;EIF2S3 Putative eukaryotic translation initiation factor 2 subunit 3-like protein;Eukaryotic translation initiation factor 2 subunit 3 0 ; 140.16 0.0003925 1980380000.0 1700860.0 1835140.0 1855300.0 840270.0 1377600.0 1561110.0 1001070.0 1151760.0 1946140.0 1602390.0 False True 1606509.9052196501 1746977.119798702 1974895.6065849578 920129.0081636122 1486009.2825282055 1551366.5334256475 1102267.9251016958 1147764.8133828056 1592770.0341970283 1588194.0712405543 1.0115324910920924 1.0999771069754218 1.2434850641662119 0.5793555238780675 0.9356597593689975 0.9768116891494624 0.6940385593057298 0.7226854917587464 1.002881236644398 1.0 20.598955784392604 -5.244066076478554 24.998190049048418 0.835978830257909 1.116496107695665 0.42681811812136894 0.14518401658790417 774.3123518740806 1114145.1175135432 0.039007539017027214 0.06736055696662722 5.700775302589094e-06 5.244066076478554 0.280517277437756 RGWDS(ph)SHEDDLPVYLAR ddPTM_KYSE-520_SHP099_60min_R1 3 RGWDSSHEDDLPVYLAR 17 1 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 RGWDS(0.669)S(0.331)HEDDLPVYLAR;RGWDS(0.66)S(0.34)HEDDLPVYLAR;RGWDS(0.574)S(0.426)HEDDLPVYLAR 222.48 1.9147e-18 916950000.0 607170.0 613010.0 618850.0 469470.0 539240.0 550130.0 449948.0 469212.0 761670.0 503180.0 True False 573489.0697366132 583560.0794532312 658742.0611950094 514088.2876486982 581675.120144098 546696.4346096375 495433.1349093045 467584.41308690433 623369.9281381862 498722.2166681159 1.149916828586468 1.1701104541760814 1.3208596673233461 1.030810881222097 1.1663308765953464 1.0961942667443807 0.9934049824754444 0.937564835612822 1.2499341463125944 1.0 18.927876946866338 -5.857309931237404 1.1664705806029043 1.0461693010332669 1.1982096368323611 0.2549544448141967 0.10002610592851738 0.64022388895726 1.8472077515609675 0.0431224971622834 0.05736720691386525 1.3889610550400926e-06 5.857309931237404 0.15204033579909426 RGWDSS(ph)HEDDLPVYLARPGTTDQVPR ddPTM_KYSE-520_SHP099_60min_R1 2 RGWDSSHEDDLPVYLARPGTTDQVPR 26 2 Q14195-2 Q14195-2 DPYSL3 Dihydropyrimidinase-related protein 3 1 RGWDS(0.459)S(0.541)HEDDLPVYLARPGTTDQVPR;RGWDS(0.336)S(0.664)HEDDLPVYLARPGTTDQVPR 147.5 7.2744e-07 1360970000.0 212529.0 199005.0 204160.0 165102.0 181180.0 192966.0 146696.0 146048.0 254270.0 168646.0 True False 200739.59270394215 189444.50108740514 217320.48026754954 180793.24444027376 195437.8352268148 191761.62761689693 161525.46329499257 145541.39357585937 208100.9776250827 167151.9276446025 1.2009409375807714 1.133367133463163 1.3001374457949126 1.081610287047813 1.1692227423326738 1.147229531355567 0.9663392194819741 0.8707132225558816 1.2449810215024613 1.0 17.35080046706651 -6.669892321662021 5.548412200723294 1.0102915382632365 1.1741304145522258 0.34734145792710336 0.10182505311537246 0.2245060926243126 10.788695687457906 0.03855002497881108 0.029427385126136102 2.1384922384119007e-07 6.669892321662021 0.1638388762889893 RGWVTFDR ddPTM_KYSE-520_SHP099_60min_R1 1 RGWVTFDR 8 1 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 0 118.71 0.00237 266420000.0 336900.0 322080.0 224380.0 194270.0 328830.0 284620.0 208510.0 223310.0 216450.0 214420.0 False True 318211.4854065001 306606.7933480636 238843.8938206936 212733.3623905948 354707.0502132331 282843.58100557164 229588.22566149678 222535.38973094575 177148.13626046784 212520.40561623572 1.4973220311894135 1.4427169591503926 1.123863344454519 1.001002053302795 1.6690493752103723 1.3309008148437464 1.0803114411332422 1.0471248117829912 0.8335582446626689 1.0 17.697241845889387 -6.931666687972238 2.6232708184995777 0.9592076100099591 1.338232989783066 0.48392851497751177 0.1819873922992849 0.27678562125018064 3.842226774651954 0.09813822510300382 0.058300700413586516 1.1703973021213933e-07 6.931666687972238 0.3790253797731069 RHAS(ph)APSHVQPSDSEK ddPTM_KYSE-520_SHP099_60min_R1 1 RHASAPSHVQPSDSEK 16 1 O60343-2;A0A3B3IRT3;O60343-3;O60343 O60343-2 TBC1D4 TBC1 domain family member 4 1 RHAS(0.79)APS(0.21)HVQPSDSEK 71.535 0.011451000000000001 620760000.0 262890.0 276530.0 268620.0 434780.0 213020.0 219000.0 227310.0 239250.0 310440.0 180410.0 True False 248306.96764177756 263245.0837200078 285935.6750071961 476101.3604786261 229783.4620819962 217633.1397660745 250288.7131318149 238420.09759136973 254071.92155555394 178811.707756856 1.3886505014504957 1.472191541719194 1.5990881055506991 2.6625849417310956 1.2850582602479834 1.217107886816936 1.3997333635007372 1.3333584281604638 1.4208908619173586 1.0 17.44808167499485 RHAS(ph)SANQYK ddPTM_KYSE-520_SHP099_60min_R1 4 RHASSANQYK 10 1 Q8TED9;Q8TED9-2;Q8TED9-4 Q8TED9 AFAP1L1 Actin filament-associated protein 1-like 1 1 RHAS(0.963)S(0.037)ANQYK;RHAS(0.964)S(0.036)ANQYK;RHAS(0.981)S(0.019)ANQYK;RHAS(0.878)S(0.122)ANQYK 141.54 0.00015124 1999280000.0 570281.0 763064.0 700772.0 976850.0 670738.0 620697.0 624692.0 665829.0 796180.0 616389.0 True False 538646.3761030113 726405.2600575857 745944.8843948442 1069689.5302993394 723521.2646228246 616822.9997871383 687841.9637663972 663519.3946046573 651613.7820644923 610928.2730033862 0.881685133763691 1.1890188949457237 1.2210023948109365 1.750924908157607 1.1842982173110432 1.009648803377151 1.1258964336106028 1.086083954410438 1.0665962124507546 1.0 19.220643482538588 -6.003073309597985 24.99983088056795 1.0705890629095747 1.279571104022692 0.18298618075050876 0.20102962992434345 229.29058415655234 1865188.4280914664 0.0666360701011044 0.0741669315477657 9.92948423003511e-07 6.003073309597985 0.20898204111311736 RHDEDEDDSLKDR ddPTM_KYSE-520_SHP099_60min_R1 3 RHDEDEDDSLKDR 13 2 O94915;H0Y9X0;A0A2C9F2R7;F2Z2S2 O94915 FRYL Protein furry homolog-like 0 ;; 178.67 1.646e-07 590922000.0 271583.5 330786.0 271962.3 272604.0 336342.0 284359.0 312414.1 329552.0 317271.0 203896.9 False True 256518.22186671477 314894.5440400916 289493.4250130656 298512.2021986185 362810.2018758001 282584.21000338445 343995.9660957907 328408.86103001534 259662.5841510505 202090.53209538758 1.2693233038034513 1.5581855358343066 1.4324937542171619 1.4771211649723377 1.7952854995925893 1.3983050421679504 1.7021874430684518 1.625058124321257 1.284882480434505 1.0 17.62464220773786 -8.008462034470297 3.9757733138653952 1.0010495380592652 1.5366076324453228 0.5749315780003466 0.1444835015084224 0.12894028227600812 5.748020953622413 0.13711286030896117 0.036056917602602205 9.80704042606874e-09 8.008462034470297 0.5355580943860576 RHDS(ph)LHDPAAPSR ddPTM_KYSE-520_SHP099_60min_R1 1 RHDSLHDPAAPSR 13 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 RHDS(1)LHDPAAPSR 51.463 0.04575 179100000.0 65558.0 65701.0 71634.0 74298.0 53593.0 67992.0 63249.0 69327.0 80221.0 58178.0 True False 61921.36705336697 62544.625340788516 76251.6422584525 81359.25958149169 57810.46419754218 67567.63670764815 69642.82617075442 69086.5208180435 65654.88860684213 57662.588181799096 1.073856880272886 1.084665591901586 1.3223763390232446 1.4109540023590603 1.002564505347503 1.1717759961557803 1.2077644858948045 1.1981168899361043 1.1386046078931602 1.0 15.815347973115637 -5.790128871348864 24.999981237229953 1.1367069602157323 1.2201862693565924 0.15142052960527763 0.1154773557368849 536.3192056817571 467345.0031924826 0.038377642693001125 0.043523692402793204 1.6213289172913476e-06 5.790128871348864 0.0834793091408601 RHEAFEK ddPTM_KYSE-520_SHP099_60min_R1 4 RHEAFEK 7 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2;P11277-3;P11277;P11277-2;H0YJE6 A0A087WUZ3 SPTBN1;SPTB Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, erythrocytic 0 ;;; 160.26 0.0024671999999999997 3735130000.0 3501120.0 3570850.0 2468170.0 2494860.0 4016560.0 3870810.0 2919860.0 3762650.0 3555050.0 2507110.0 False True 3306905.894290317 3399301.006044874 2627272.187411629 2731970.7442929884 4332640.420899745 3846650.838985934 3215027.943887478 3749598.2453591116 2909542.5355175626 2484898.955902066 1.3308009512563244 1.3679835946531929 1.0572953806316356 1.0994293099138233 1.7435881690919353 1.5480109683532486 1.2938264295420259 1.5089540105657677 1.1708896768646848 1.0 21.244755757617643 -7.990372178160885 6.127416187234102 1.0002135822124492 1.3646744163230582 0.27882976822322736 0.19213628717252662 0.17874582176287376 28.403110261797234 0.2002458349147882 0.051957870215510626 1.0224164346023443e-08 7.990372178160885 0.36446083411060903 RHEHPPNPPVS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 6 RHEHPPNPPVSPGK 14 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 RHEHPPNPPVS(1)PGK;RHEHPPNPPVS(1)PGK;RHEHPPNPPVS(1)PGK;RHEHPPNPPVS(1)PGK;RHEHPPNPPVS(1)PGK;RHEHPPNPPVS(1)PGK 150.29 1.6381e-06 16967620000.0 7966720.0 6942680.0 7103710.0 8302400.0 7333560.0 7440410.0 7632710.0 8146700.0 8782400.0 6016780.0 True False 7524790.160337414 6609143.231624866 7561626.512937862 9091457.599792425 7910669.449751409 7393971.641310042 8404298.81487104 8118440.999154066 7187737.54628752 5963476.010184006 1.2618127661597205 1.108270280678288 1.2679897596677923 1.5245232116749814 1.3265198746908888 1.2398761441620854 1.4092953171135034 1.3613605530214195 1.2052932776140637 1.0 22.5077220679382 -10.031302940794744 6.676889690053966 0.9999998965424132 1.3044899616281531 0.4058943330918733 0.10899040020788289 1.794756575892089e-07 2.6134988475315177e-08 0.1126011731480245 0.027309786549554797 9.304586104744307e-11 10.031302940794744 0.30449006508573995 RHEQEDKPR ddPTM_KYSE-520_SHP099_60min_R1 2 RHEQEDKPR 9 2 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 0 ; 96.113 0.0020893 335460000.0 122172.0 143297.0 80762.0 69178.0 181884.0 179396.0 98806.0 104036.0 102238.0 117533.0 False True 115394.87561615607 136412.7970268179 85968.04774376888 75752.65632087586 196197.23602160293 178276.32302043264 108794.27473363298 103675.12339818483 83674.15641024585 116491.74905929036 0.990584110445659 1.171008231298754 0.7379754226199664 0.6502834486785868 1.6842157286328079 1.5303772538404932 0.93392257917134 0.8899782536994761 0.7182839736371246 1.0 16.829868248949058 -6.982177544099744 24.805877425198165 0.8648685292912797 1.125046466161783 0.1357891709022313 0.3021188310269765 492.95807001518097 686113.5371103559 0.14049261297599716 0.09469932740162111 1.0418914062780293e-07 6.982177544099744 0.2601779368705033 RHES(ph)EEGDSHR ddPTM_KYSE-520_SHP099_60min_R1 1 RHESEEGDSHR 11 1 Q6UN15;Q6UN15-3;Q6UN15-5;H0Y8P7 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 RHES(0.999)EEGDS(0.001)HR 49.148999999999994 0.047370999999999996 447220000.0 122880.0 156540.0 84578.0 90631.0 211850.0 228230.0 98969.0 100650.0 123050.0 187130.0 True False 116063.60144479308 149019.58342866952 90030.03320958462 99244.54299079636 228521.38973838586 226805.53191238016 108973.75236435987 100300.86864188648 100707.22183807153 185472.17378493704 0.6257736623035098 0.8034605967440923 0.4854099209188022 0.5350912806245247 1.2321060624617806 1.2228547672890864 0.5875477174852095 0.5407866128651172 0.5429775247840999 1.0 17.50084323134345 -5.648510530331058 21.391005784957002 0.8408293437737526 0.6169879093026224 0.18189428669719576 0.2502425961057422 6.8959278620336395 1273.4907640892857 0.08321021700814181 0.10742385989477439 2.246412306609783e-06 5.648510530331058 -0.22384143447113025 RHES(ph)EEGDSHRR ddPTM_KYSE-520_SHP099_60min_R1 1 RHESEEGDSHRR 12 2 Q6UN15;Q6UN15-3;Q6UN15-5;H0Y8P7 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 RHES(1)EEGDSHRR 87.566 0.0018938 14269000.0 3710.3 2605.3 2883.2 4403.6 2470.1 3237.3 3170.4 2667.3 3479.9 1180.3 True False 3504.482262700323 2480.137477364973 3069.0556852831073 4822.116820009383 2664.4828170535143 3217.0948098845374 3490.8949721222416 2658.0477588525014 2848.037881140227 1169.8434602595046 2.9956847918121707 2.1200592742680358 2.6234755243255394 4.122018871601591 2.277640477181841 2.750021621842374 2.9840701689676172 2.2721396914616854 2.434546140479728 1.0 10.19209977667872 -8.471633640899306 0.7743323857358545 0.9846487919793744 2.8381315525585005 0.5187932804705933 0.5216596427345723 1.3096167407794024 1.3228867292867754 0.56058169912373 0.18713022150402486 3.3757195517020187e-09 8.471633640899306 1.853482760579126 RHGAPAAPS(ph)PPPR ddPTM_KYSE-520_SHP099_60min_R1 8 RHGAPAAPSPPPR 13 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR;RHGAPAAPS(1)PPPR 138.05 8.7331e-06 19472630000.0 2011821.0 1977217.0 1849548.0 2012092.0 2078056.0 1640285.0 1754167.0 2009090.0 2386859.0 1953450.0 True False 1900221.278664267 1882228.5274567772 1968772.8234614315 2203320.6187224826 2241587.184678738 1630047.3728821739 1931495.3193801257 2002120.9357151312 1953465.573418912 1936143.952761101 0.9814462793194662 0.9721531938637951 1.0168525024463182 1.1379942155542544 1.157758534163769 0.8419040178069362 0.9975990249204632 1.0340764863376721 1.0089464528880245 1.0 20.88475479064218 -6.244835551373931 24.945726548947082 0.9799533214900575 1.0514229887233222 0.21113455243630153 0.07397172940036978 1563.5329029866755 2349065.373394 0.026791555125979853 0.02671823199007533 5.690683717489739e-07 6.244835551373931 0.07146966723326464 RHHNHGS(ph)PHLK ddPTM_KYSE-520_SHP099_60min_R1 4 RHHNHGSPHLK 11 1 Q9UK58 Q9UK58 CCNL1 Cyclin-L1 1 RHHNHGS(1)PHLK;RHHNHGS(1)PHLK;RHHNHGS(1)PHLK;RHHNHGS(1)PHLK 139.86 4.9053999999999995e-05 2134880000.0 514205.0 741090.0 1029830.0 1527660.0 500040.0 552160.0 975270.0 821310.0 861000.0 136439.0 True False 485681.02360774536 705486.9240012314 1096214.4895862604 1672848.3470922732 539390.3031615881 548713.764626648 1073859.809317959 818461.0673051948 704664.104043718 135230.2566079357 3.591511513698068 5.216931045591401 8.106281220514457 12.370370278466998 3.988680615503137 4.057625699975548 7.940972946840817 6.052351654394221 5.210846460838308 1.0 17.045058452792 -8.278721464709601 1.6462481545780412 1.0024422546198464 6.545103108551819 0.2995947144558305 2.4831582684502225 1.4253934164904956 6.204043369215042 2.529727234556179 0.7230513105542865 5.263547364065285e-09 8.278721464709601 5.542660853931973 RHNS(ph)ISEAK ddPTM_KYSE-520_SHP099_60min_R1 5 RHNSISEAK 9 1 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 RHNS(0.527)IS(0.473)EAK;RHNS(1)ISEAK;RHNS(0.992)IS(0.008)EAK;RHNS(0.997)IS(0.003)EAK;RHNS(1)ISEAK 134.56 0.00032527 2512640000.0 3893870.0 3835180.0 3657780.0 3954520.0 3912840.0 3730310.0 3749170.0 4219120.0 4364470.0 3808420.0 True False 3677869.2688626 3650932.1960774558 3893566.3514549313 4330356.391830203 4220758.246985822 3707027.751601765 4128172.691973112 4204484.857470006 3571992.267335291 3774680.361705928 0.9743525057577126 0.9672162530941969 1.031495644228608 1.1472114131203266 1.1181763334997439 0.9820772612191226 1.0936482818130397 1.1138651368005719 0.946303242937626 1.0 21.847923052144466 -4.8888376546556644 4.378766472957048 1.064652619994233 0.9714466852235896 0.2263796759465908 0.06174948410892774 0.27856374204576384 9.251715575740912 0.016383277215883785 0.03661881212482608 1.2917020396427865e-05 4.8888376546556644 -0.09320593477064343 RHNS(ph)WSSSSR ddPTM_KYSE-520_SHP099_60min_R1 6 RHNSWSSSSR 10 1 H3BQ37;H3BPW9;Q96F86 H3BQ37 EDC3 Enhancer of mRNA-decapping protein 3 1 RHNS(1)WSSSSR;RHNS(1)WSSSSR;RHNS(0.998)WS(0.002)SSSR;RHNS(1)WSSSSR;RHNS(1)WSSSSR;RHNS(1)WSSSSR 167.73 3.4824000000000004e-05 4047030000.0 495384.0 580333.0 793960.0 956680.0 471745.0 560039.0 434907.0 437502.0 545733.0 468543.0 True False 467904.06199647853 552452.9315824081 845139.9319809162 1047602.5795636708 508868.64763811516 556543.5888650807 478871.6438432902 435984.40767573466 446641.644009396 464392.0735409382 1.0075625503871368 1.1896261005706141 1.8198844901395876 2.2558580114768474 1.0957737580619067 1.198434729131997 1.0311796241308488 0.9388282714461549 0.9617770617913499 1.0 18.82498382226309 -5.963776089207662 24.99991240297092 1.0363811573031767 1.573746336693882 0.3957643340904057 0.3219731517577457 197.88668415607938 136570.56141136543 0.10988779368656201 0.12460068927024061 1.0869859004636894e-06 5.963776089207662 0.5373651793907053 RHPKGEEGS(ph)DDDETENGPKPK ddPTM_KYSE-520_SHP099_60min_R1 4 RHPKGEEGSDDDETENGPKPK 21 3 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 RHPKGEEGS(1)DDDETENGPKPK;RHPKGEEGS(1)DDDETENGPKPK;RHPKGEEGS(0.999)DDDET(0.001)ENGPKPK;RHPKGEEGS(0.708)DDDET(0.292)ENGPKPK 238.69 1.2101999999999999e-26 6265300000.0 2697120.0 2920680.0 3391740.0 2170720.0 2303330.0 2120250.0 1670910.0 1531350.0 3472940.0 1317160.0 True False 2547505.3770245747 2780366.1487699407 3610376.987375874 2377024.576149236 2484588.966845015 2107016.7332831956 1839821.889310109 1526038.1042697763 2842341.6416929015 1305490.987134972 1.9513772229215656 2.129747486707455 2.7655319132453 1.820789725531426 1.903183546519681 1.6139649787297656 1.4092949759444748 1.1689380618542735 2.1772204248845095 1.0 20.316161066913217 -5.958456024580726 1.4522599353977492 1.4618551798264767 2.246240105109115 0.46622869024195557 0.36106653635201297 0.3610635148808686 1.5701254854457511 0.14369689983296766 0.166620652429779 1.1003832613221195e-06 5.958456024580726 0.7843849252826383 RHPPLYQAGLTPPLS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 1 RHPPLYQAGLTPPLSPPK 18 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 RHPPLY(0.001)QAGLT(0.013)PPLS(0.986)PPK 53.342 0.041862 786490000.0 519140.0 621700.0 411020.0 404510.0 459740.0 464510.0 429580.0 507620.0 541070.0 459690.0 True False 490342.26932006737 591832.598809275 437515.006855252 442954.5087796343 495918.9224372218 461610.8207887643 473006.13869677996 505859.1846993984 442825.3272647328 455617.5042334079 1.0762147300400258 1.2989680890444577 0.9602682135564261 0.9722069601450464 1.088454499287999 1.0131542719488804 1.0381649833507363 1.1102716203814949 0.9719234295218785 1.0 18.79746364901933 -4.771780280865916 24.998587616332273 1.0244851499999392 1.1875914337284628 0.4907607205089588 0.06840730694657567 145.93181301170736 352785.0022913135 0.01713339727865506 0.03629938474905447 1.6912963792816395e-05 4.771780280865916 0.16310628372852354 RHQLQEASR ddPTM_KYSE-520_SHP099_60min_R1 3 RHQLQEASR 9 1 K7EIG1;I3L2B0;A0A494C0R8;O75153 K7EIG1 CLUH Clustered mitochondria protein homolog 0 ;; 119.68 0.002336 79171000.0 59619.0 76398.0 96547.0 63894.0 68162.0 72121.0 53995.0 56176.0 56926.0 51013.0 False True 56311.815222470024 72727.72540426404 102770.57410066186 69966.46654956843 73525.96161127136 71670.86608707339 59453.34154041779 55981.13856757697 46589.67338768027 50561.06450751344 1.113738719130449 1.4384136511496235 2.0326030533908166 1.383801295148193 1.454201218416699 1.4175110193026692 1.1758720295847993 1.1071985748887487 0.9214535698859145 1.0 15.625739217738984 -6.921092125404441 1.2287551679141557 0.969799190609078 1.5167308090253993 0.4958926088955491 0.21545414742296354 0.4183049488905124 1.220511701362968 0.16292634459347488 0.08087939879616898 1.1992448844463868e-07 6.921092125404441 0.5469316184163212 RHS(ph)DENDGGQPHK ddPTM_KYSE-520_SHP099_60min_R1 13 RHSDENDGGQPHK 13 1 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK;RHS(1)DENDGGQPHK 216.72 1.6319999999999998e-11 15335324000.0 6836782.2 6996485.8 4736414.5 5234906.7 9962872.4 11208165.2 7405112.7 8899563.8 9134573.7 9859565.5 True False 6457532.26257858 6660364.120228714 5041731.357201146 5732430.658835903 10746893.776890295 11138210.883529022 8153693.758651453 8868693.290351618 7475965.379944031 9772217.420295881 0.6608052179812286 0.6815611885994093 0.5159250086607767 0.5866049037069355 1.0997395283664189 1.139783367938183 0.834374984506288 0.9075415444535917 0.7650224159377816 1.0 23.220254531547152 -5.748788555028004 24.9859332512096 0.9560542691999906 0.6094409834591983 0.6939341954235652 0.11273508133629839 141.26116312045048 278995.68901068 0.036337063564926976 0.04659049324595697 1.7832467655547846e-06 5.748788555028004 -0.3466132857407923 RHS(ph)DENDGGQPHKR ddPTM_KYSE-520_SHP099_60min_R1 8 RHSDENDGGQPHKR 14 2 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RHS(1)DENDGGQPHKR;RHS(1)DENDGGQPHKR;RHS(1)DENDGGQPHKR;RHS(1)DENDGGQPHKR;RHS(1)DENDGGQPHKR;RHS(1)DENDGGQPHKR;RHS(1)DENDGGQPHKR;RHS(1)DENDGGQPHKR 197.38 3.394e-11 23946880000.0 4803031.0 4498178.0 3627717.0 4049436.0 6181807.0 6022378.0 5425809.0 5746967.0 6490169.0 3461093.0 True False 4536597.295825081 4282078.776977169 3861565.442372422 4434293.179932667 6668280.041229561 5984790.105014308 5974302.724512877 5727032.112829186 5311717.9134463575 3430430.408709607 1.322457171644409 1.2482628320065292 1.1256795743671684 1.2926346410276468 1.9438610456283547 1.7446178444020821 1.741560682690011 1.6694791703946765 1.5484115054368401 1.0 21.709958168916064 -5.619079638701963 8.111913454047919 1.6542460100196734 1.2298581736967558 0.35069980121086564 0.2364553983070433 0.22988008550699532 17.095758569078555 0.0663479981816135 0.0857101983712893 2.4039219406703575e-06 5.619079638701963 -0.42438783632291766 RHS(ph)DFCGPSPAPLHPK ddPTM_KYSE-520_SHP099_60min_R1 1 RHSDFCGPSPAPLHPK 16 1 Q96L34-2;Q96L34 Q96L34-2 MARK4 MAP/microtubule affinity-regulating kinase 4 1 RHS(1)DFCGPSPAPLHPK 104.63 0.00042081 440320000.0 153140.0 137100.0 121160.0 151800.0 92565.0 105170.0 129490.0 121490.0 153560.0 118520.0 True False 144645.01892297843 130513.51020870461 128970.16746285434 166227.02635966567 99849.33887719468 104513.59501916928 142580.11290061485 121068.57954597904 125677.37493258223 117470.00500716463 1.2313357687705586 1.1110369000217923 1.097898714271684 1.415059328119781 0.849998592160652 0.8897045251065996 1.2137576132044834 1.030633986425683 1.0698677924200057 1.0 16.841932898020907 -5.771577136745144 24.999912146703778 1.0147992223681692 1.198209151802211 0.3961891770465171 0.12315737876491831 249.0891700780034 614257.3370454739 0.03964728108583164 0.04546584016676446 1.6920876794200798e-06 5.771577136745144 0.18340992943404189 RHS(ph)DPWGR ddPTM_KYSE-520_SHP099_60min_R1 4 RHSDPWGR 8 1 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 RHS(1)DPWGR;RHS(1)DPWGR;RHS(1)DPWGR;RHS(1)DPWGR 138.63 0.00042839 5628830000.0 325015.0 379770.0 410792.0 352785.0 427780.0 425527.0 382114.0 503463.0 528998.0 455226.0 True False 306985.7700486604 361525.2791536082 437272.30961043894 386313.58033132163 461443.8522647467 422871.1281517741 420741.8121932622 501716.6043621481 432945.2981543769 451193.0518004686 0.680386740938597 0.8012651739891725 0.9691468161256486 0.8562046307888654 1.0227193225236353 0.9372288125101286 0.9325095112043683 1.111977683078379 0.9595566607835057 1.0 18.783385325395614 -3.4121309620377165 0.5738499174798084 1.000689615405973 1.9131510711388997e-11 0.7205103289420367 0.061041892146986465 4.74033496596717 0.5754810068608842 0.029641630904518976 3.9070005317164873 0.00038714088450572903 3.4121309620377165 -1.0006896153868414 RHS(ph)EQVANGPTPPPR ddPTM_KYSE-520_SHP099_60min_R1 5 RHSEQVANGPTPPPR 15 1 A6ND36;A6ND36-2;K7EKG0 A6ND36 FAM83G Protein FAM83G 1 RHS(1)EQVANGPTPPPR;RHS(1)EQVANGPTPPPR;RHS(1)EQVANGPTPPPR;RHS(1)EQVANGPTPPPR;RHS(1)EQVANGPTPPPR 190.37 3.0116e-11 4377690000.0 807881.0 783078.0 677051.0 696782.0 659629.0 717861.0 705667.0 678911.0 765848.0 752988.0 True False 763066.230459154 745457.757455958 720694.7907799027 763003.9517848525 711538.0495243891 713380.563221982 777002.7070062408 676556.0162000189 626789.3086569958 746317.1121358 1.0224423613648916 0.9988485394936442 0.9656683185481683 1.0223589133596287 0.9533990819105291 0.9558678899649499 1.041116027451957 0.9065262007243279 0.8398431423651253 1.0 19.50942924016705 -7.2888554448979495 21.68468009268386 0.9048883121419342 0.9913556061648267 0.37467097721345 0.045934235297661954 137.48615006023604 108741.68443730506 0.023878427703253668 0.011480591368554541 5.142147797078006e-08 7.2888554448979495 0.08646729402289244 RHS(ph)EQVANGPTPPPRR ddPTM_KYSE-520_SHP099_60min_R1 5 RHSEQVANGPTPPPRR 16 2 A6ND36;A6ND36-2;K7EKG0 A6ND36 FAM83G Protein FAM83G 1 RHS(1)EQVANGPTPPPRR;RHS(1)EQVANGPTPPPRR;RHS(1)EQVANGPTPPPRR;RHS(1)EQVANGPTPPPRR;RHS(1)EQVANGPTPPPRR 99.059 0.00076214 6775710000.0 866670.0 816160.0 737958.0 827656.0 827025.0 806620.0 819510.0 869710.0 1172140.0 739910.0 True False 818594.087436187 776950.4485188647 785527.953454547 906316.1773961504 892107.162371435 801585.585379504 902354.0684468528 866693.1790018401 959308.9232448366 733354.973041269 1.1162317261467882 1.0594466214591858 1.0711428739576325 1.2358492281542737 1.2164738703165954 1.0930389986383788 1.2304465117414205 1.1818194610552775 1.3081099310836095 1.0 19.484152163769377 -5.248195045758311 24.521891943666116 1.1882913682575915 1.079991014087585 0.23360830338459937 0.08097644149283101 786.5152370784748 1456229.0540908661 0.020846467898937154 0.0358167933878871 5.646833132403e-06 5.248195045758311 -0.1083003541700065 RHS(ph)EVETDSK ddPTM_KYSE-520_SHP099_60min_R1 6 RHSEVETDSK 10 1 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 RHS(1)EVETDSK;RHS(1)EVETDSK;RHS(1)EVETDSK;RHS(1)EVETDSK;RHS(1)EVETDSK;RHS(0.982)EVET(0.018)DSK 214.58 2.9478000000000005e-09 8644787000.0 6717938.0 7673606.0 5386575.1 7070439.1 9871634.0 11138053.0 9043002.0 10188919.0 10304694.0 12663405.0 True False 6345280.587262618 7304954.4494425785 5733802.3497708915 7742411.506258976 10648475.43388578 11068536.27977601 9957156.893354578 10153576.01810056 8433621.329796383 12551217.083680011 0.5055510190731387 0.5820116408424647 0.4568323782102686 0.616865396769068 0.8484018213446158 0.8818695594205053 0.7933220202446808 0.8089714288587172 0.6719365360003517 1.0 23.581323932407777 -5.632638989971259 3.844302470974073 0.8248365759465973 0.5228873711800432 0.7576819180704926 0.08259041136255947 0.11137851336743895 3.0923382023063732 0.02454518263424699 0.03233161796888037 2.330027302777974e-06 5.632638989971259 -0.30194920476655407 RHS(ph)EVETDSKK ddPTM_KYSE-520_SHP099_60min_R1 6 RHSEVETDSKK 11 2 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 RHS(1)EVETDSKK;RHS(1)EVETDSKK;RHS(0.948)EVET(0.051)DS(0.001)KK;RHS(1)EVETDSKK;RHS(1)EVETDSKK;RHS(1)EVETDSKK 205.28 7.182e-08 15099700000.0 6789460.0 8199060.0 4792870.0 5625650.0 9694060.0 10347080.0 8154750.0 9149690.0 9185870.0 10097570.0 True False 6412835.119347046 7805164.850560032 5101826.069063143 6160310.084586657 10456927.370343626 10282500.035665562 8979111.712690458 9117951.860943697 7517947.564938525 10008113.385590574 0.6407636356898276 0.7798837353099645 0.5097690116509493 0.6155316039340755 1.0448450139862766 1.0274164210079837 0.897183251902237 0.9110560112230035 0.7511852909023466 1.0 23.254666703742235 -5.751129314016853 24.997630011017694 0.9365356834473635 0.6376782629379006 0.6916485629412754 0.09881992032760607 127.3842846884465 308852.563300643 0.030782065486840267 0.03929277283169693 1.7736612830322536e-06 5.751129314016853 -0.29885742050946285 RHS(ph)FATEGAGAVENFAAAR ddPTM_KYSE-520_SHP099_60min_R1 2 RHSFATEGAGAVENFAAAR 19 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RHS(0.861)FAT(0.139)EGAGAVENFAAAR;RHS(1)FATEGAGAVENFAAAR 180.83 9.0112e-10 2491300000.0 318817.0 357140.0 364330.0 249995.0 255809.0 332227.0 267804.0 313434.0 323990.0 303443.0 True False 301131.58546406747 339982.4583219313 387815.2947486106 273754.44963626267 275939.71294588986 330153.448059652 294876.2418351704 312346.7706100456 265161.5831232569 300754.73109508195 1.0012530288970463 1.1304309564275739 1.2894736296800096 0.9102249152972317 0.9174908469142353 1.097749807151914 0.9804542085223156 1.038543165963693 0.881653905020126 1.0 18.19822790668015 -5.280752415849704 24.993397162524925 0.9796911905730213 1.139390406565383 0.42360667934877194 0.0882084930339875 785.1255458974372 1016044.9411269464 0.025229556221115352 0.037487164532879556 5.238990176938538e-06 5.280752415849704 0.1596992159923617 RHS(ph)GSYLVTSV ddPTM_KYSE-520_SHP099_60min_R1 3 RHSGSYLVTSV 11 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 RHS(0.98)GS(0.02)YLVTSV;RHS(0.908)GS(0.092)YLVTSV;RHS(0.61)GS(0.389)YLVTSV 91.20200000000001 0.0027061 425220000.0 499760.0 680200.0 659020.0 1014760.0 509510.0 581870.0 559480.0 489430.0 645440.0 537540.0 True False 472037.31655313924 647522.170998985 701501.4836692825 1111202.48530128 549605.5382846583 578238.3334962822 616037.6983986096 487732.2815638213 528244.3662183246 532777.8137997912 0.8859928178813445 1.2153699989510314 1.31668674163841 2.085677099382466 1.0315848821947957 1.0853273513254333 1.1562750595881723 0.9154515614779387 0.9914909227373155 1.0 19.023174480668334 -5.91223394302384 22.87914003218838 1.0345437807946316 1.3850312668182156 0.2618708050890992 0.2842653090571514 16.711120855209384 4350.203039455381 0.09252788426649985 0.10491675427763189 1.2239567083434316e-06 5.91223394302384 0.35048748602358404 RHS(ph)HS(ph)HS(ph)PMSTR ddPTM_KYSE-520_SHP099_60min_R1 5 RHSHSHSPMSTR 12 1 P62995 P62995 TRA2B Transformer-2 protein homolog beta 3 RHS(0.999)HS(0.999)HS(0.996)PMS(0.003)T(0.003)R;RHS(1)HS(1)HS(1)PMSTR;RHS(1)HS(1)HS(0.999)PMS(0.001)T(0.001)R;RHS(1)HS(1)HS(0.999)PMS(0.001)TR;RHS(1)HS(1)HS(0.992)PMS(0.004)T(0.004)R 99.39200000000001 0.00069562 6961899000.0 321400.0 243838.0 226172.0 303221.0 209400.0 204900.0 233395.0 269985.0 343263.0 146090.9 True False 303571.30130498414 232123.65647170015 240751.40900799516 332039.03267328173 225878.58867697913 203621.14309620415 256988.84431569208 269048.4850499726 280935.0921560498 144796.64828300022 2.0965354164252763 1.603101033236779 1.662686338826397 2.2931403220350965 1.5599711136649168 1.406255914834668 1.774825918714748 1.8581126582718013 1.940204386547481 1.0 17.14366868209647 RHS(ph)HSHS(ph)PMSTR ddPTM_KYSE-520_SHP099_60min_R1 6 RHSHSHSPMSTR 12 1 P62995 P62995 TRA2B Transformer-2 protein homolog beta 2 RHS(0.505)HS(0.495)HS(0.999)PMS(0.001)TR;RHS(0.894)HS(0.123)HS(0.966)PMS(0.008)T(0.01)R;RHS(0.976)HS(0.024)HS(1)PMSTR;RHS(0.912)HS(0.088)HS(0.996)PMS(0.003)TR;RHS(0.952)HS(0.052)HS(0.99)PMS(0.003)T(0.003)R;RHS(0.783)HS(0.237)HS(0.979)PMSTR 92.439 0.0011504000000000002 4217534000.0 512020.7 676308.2 708498.1 1238552.9 539811.3 659220.5 611857.6 601295.6 673366.7 380926.2 True False 483617.89108304 643817.3389126953 754169.021163041 1356264.595231493 582291.3782038451 655106.0603340714 673710.1373627246 599209.8459070482 551100.281473142 377551.4902240989 1.2809322797162963 1.705243802720927 1.9975262730797263 3.5922639172380717 1.5422833528169129 1.7351436222519678 1.7844192244158228 1.5870943736743883 1.4596691994144473 1.0 18.52631388609382 -7.623174971730403 0.7821982330293564 1.0381305597147268 2.044969479412373 0.2241163892582244 0.5837340520712151 0.9767896334155053 1.2487259379606668 0.5893983301579547 0.23907232293276887 2.3813598564253276e-08 7.623174971730403 1.0068389196976462 RHS(ph)LENK ddPTM_KYSE-520_SHP099_60min_R1 5 RHSLENK 7 1 O14578-4 O14578-4 CIT Citron Rho-interacting kinase 1 RHS(1)LENK;RHS(1)LENK;RHS(1)LENK;RHS(1)LENK;RHS(1)LENK 157.97 0.00071267 8128640000.0 4808700.0 7317000.0 3643590.0 3597960.0 9434310.0 14116610.0 4915650.0 4849300.0 5915130.0 27365300.0 True False 4541951.82509421 6965480.336959092 3878461.6413501236 3939909.0366338794 10176736.523118965 14028503.000699405 5412571.874120841 4832478.910135132 4841091.500292818 27122864.731881253 0.1674584108276522 0.25681211796081405 0.14299601755530017 0.14526153765766342 0.375208762928233 0.5172205495022716 0.1995575293253849 0.17816992997995715 0.17848746982107733 1.0 24.693006228976703 -10.098014545857136 3.7250414279013158 1.0003237561847236 0.24408068834214527 0.8017716667651076 0.11333373958217335 71735264.95650762 126949511.50123289 290061.01806906884 0.03176586350763454 7.979679604206028e-11 10.098014545857136 -0.7562430678425783 RHS(ph)LEVMNSMVR ddPTM_KYSE-520_SHP099_60min_R1 7 RHSLEVMNSMVR 12 1 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 RHS(1)LEVMNSMVR;RHS(1)LEVMNSMVR;RHS(1)LEVMNSMVR;RHS(1)LEVMNSMVR;RHS(1)LEVMNSMVR;RHS(1)LEVMNSMVR;RHS(1)LEVMNSMVR 225.75 2.5502e-11 18615470000.0 4898130.0 4656240.0 4375410.0 4756900.0 4925020.0 4198700.0 4560260.0 4953720.0 5419090.0 4547030.0 True False 4626420.964719919 4432547.241241277 4657455.929503527 5208994.34578586 5312591.054469407 4172494.355871311 5021255.584648675 4936536.701526941 4435119.860142008 4506746.851735806 1.0265544342562793 0.9835358823258621 1.0334407684136226 1.1558213756292033 1.1788084019902791 0.9258328663976865 1.1141641076899411 1.095365873418339 0.9841067195584304 1.0 22.10365498409845 -5.00586363461817 24.468927135716402 1.0717589001706307 1.0059059248523834 0.08997086332177273 0.0747897172271658 437.7047159756151 1826579.9327588088 0.01996897186810473 0.039445744332416384 9.865892190070742e-06 5.00586363461817 -0.0658529753182473 RHS(ph)LSSTK ddPTM_KYSE-520_SHP099_60min_R1 1 RHSLSSTK 8 1 P42858;A0A3B3IU44 P42858 HTT Huntingtin 1 RHS(1)LSSTK 86.463 0.0032748000000000005 581530000.0 325210.0 350670.0 270720.0 373990.0 402210.0 478950.0 292450.0 188010.0 322840.0 513630.0 True False 307169.95300993766 333823.2868335992 288171.0443673153 409533.89715580683 433861.6387381456 475960.69539251836 322013.700036951 187357.8371918637 264220.3941341161 509079.6377980937 0.6033829094766592 0.6557388315067455 0.5660627983742044 0.8044593944616426 0.8522470877340799 0.9349434942068716 0.6325409152676913 0.36803247130888345 0.5190158366516885 1.0 18.95753183617839 -5.244684707475565 24.400771562890608 0.7133950727873595 0.6131292515731802 0.08184479222430341 0.18069878814781096 2205.760876277801 3212365.242461587 0.05438482627858462 0.09382714726486667 5.692660611152061e-06 5.244684707475565 -0.10026582121417926 RHS(ph)MENMELMK ddPTM_KYSE-520_SHP099_60min_R1 3 RHSMENMELMK 11 1 P81274;A0A2R8Y6E3 P81274 GPSM2 G-protein-signaling modulator 2 1 RHS(1)MENMELMK;RHS(1)MENMELMK;RHS(1)MENMELMK 170.77 7.937899999999999e-06 2499000000.0 2211920.0 2549800.0 2260790.0 2368910.0 2622030.0 2438470.0 2494030.0 2756290.0 3240870.0 2161690.0 True False 2089220.3882467968 2427303.780672172 2406524.1407918963 2594050.494161238 2828368.84369006 2423250.604225482 2746150.8917871662 2746729.07331292 2652409.703684277 2142539.1083693723 0.9751142371617408 1.1329099063771706 1.123211301670678 1.2107365900711602 1.3201013846802796 1.1310181432672897 1.281727311795576 1.2819971698922126 1.2379749304566734 1.0 21.030890107820927 -4.099063889360256 0.954050719313603 1.224179208416125 0.7903632511467935 0.3686270708968392 0.08912132454183272 2.5390420890290306 1.504607179388906 0.028361583176852733 1.2214403170915533 7.960422354817431e-05 4.099063889360256 -0.4338159572693314 RHS(ph)MQTEQIR ddPTM_KYSE-520_SHP099_60min_R1 4 RHSMQTEQIR 10 1 Q69YU3 Q69YU3 ANKRD34A Ankyrin repeat domain-containing protein 34A 1 RHS(1)MQTEQIR;RHS(1)MQTEQIR;RHS(1)MQTEQIR;RHS(1)MQTEQIR 229.48 4.6655e-10 2123160000.0 538594.0 530115.0 496631.0 415900.0 478910.0 491427.0 445211.0 527341.0 535484.0 399699.0 True False 508717.1171594799 504647.4796811622 528644.6288976953 455427.01095510594 516597.4923748422 488359.82180741034 490217.27272063907 525511.7771533151 438253.60405313125 396157.97782111604 1.2841269030033002 1.2738541388381033 1.334428835196658 1.1496095912544078 1.304018904822132 1.232740091448891 1.237428753591819 1.3265207482218329 1.1062596958504856 1.0 18.595716329918233 -7.953762772140866 4.385814967334607 1.0011168125700096 1.2647276105199534 0.7511239171461084 0.05112678123523767 0.0806894122907807 3.3079193432874296 0.04726286842000719 0.012387267829867099 1.1123391625410994e-08 7.953762772140866 0.2636107979499438 RHS(ph)MREEDFIQPSSR ddPTM_KYSE-520_SHP099_60min_R1 3 RHSMREEDFIQPSSR 15 2 Q14289 Q14289 PTK2B Protein-tyrosine kinase 2-beta 1 RHS(1)MREEDFIQPSSR;RHS(1)MREEDFIQPSSR;RHS(1)MREEDFIQPSSR 113.47 0.00011159999999999999 2167390000.0 1203490.0 1339390.0 1512160.0 1495450.0 1303130.0 1158270.0 1174650.0 1370990.0 1638340.0 1086960.0 True False 1136730.0106021636 1275043.6939346225 1609636.2531415452 1637577.1183765645 1405678.9172045437 1151040.8072915582 1293395.0854792427 1366234.3556814706 1340858.7551904584 1077330.3800420843 1.0551359468371801 1.1835215246457775 1.494097152517566 1.5200324326810453 1.3047797994424264 1.0684195197824038 1.2005556600276308 1.268166554096526 1.2446124049134117 1.0 20.039029311830895 -6.091259080056578 8.569182545403487 1.1764563037011024 1.3285899831857932 0.20930798334723177 0.14707915207651578 0.6321975078926971 54.52175013785749 0.05274162313075144 0.05280836163732931 8.104774201636682e-07 6.091259080056578 0.1521336794846908 RHS(ph)PPGR ddPTM_KYSE-520_SHP099_60min_R1 1 RHSPPGR 7 1 Q9H6A9-2;Q9H6A9 Q9H6A9-2 PCNXL3 Pecanex-like protein 3 1 RHS(1)PPGR 46.461999999999996 0.059888 108650000.0 24690.0 18002.0 14633.0 20486.0 21999.0 19750.0 20721.0 16158.0 22453.0 14429.0 True False 23320.396481705226 17137.156898447116 15576.266593627823 22432.983280659508 23730.196142812125 19626.73292410947 22815.68089747193 16101.951669305558 18376.101194069226 14301.170285592127 1.6306635062726034 1.1983045132825343 1.0891602772760707 1.5686117172704297 1.659318480160982 1.372386492305643 1.5953715983969399 1.1259184631573578 1.2849368846815588 1.0 13.80384558922008 -7.280333284435081 24.467007138394443 1.1540706942907744 1.4318935105840414 0.3576207968348163 0.1881158879030711 851.2348049794042 1102314.6830089064 0.10814837507892651 0.052102805153270836 5.244048692246515e-08 7.280333284435081 0.277822816293267 RHS(ph)PS(ph)PRPR ddPTM_KYSE-520_SHP099_60min_R1 13 RHSPSPRPR 9 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR;RHS(1)PS(1)PRPR 109.44 0.0018009 62232690000.0 31591565.0 29053590.0 26737475.0 28397107.0 29202230.0 31122418.0 27152247.0 28067816.0 35230690.0 26673284.0 True False 29839117.913226467 27657811.926072355 28461015.41997259 31095959.51137846 31500279.3630398 30928171.44498723 29897061.107154056 27970455.297373496 28833684.78942161 26436979.45526095 1.1286886220766228 1.046178969608741 1.0765607874430927 1.1762296658739648 1.191523389286867 1.1698829473815902 1.1308803699661896 1.0580049564553178 1.0906573059231892 1.0 24.656054016024946 -7.9146912728683025 1.1691880007372522 1.0054143393758466 1.1301646444637417 0.42915052882540405 0.04512704459714748 0.514493041915539 1.5696296185136478 0.04894627823051684 0.015670188881474017 1.2170508587507305e-08 7.9146912728683025 0.12475030508789509 RHS(ph)T(ph)SPSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RHSTSPSPSR 10 1 O15042-2;O15042;E7ET15;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 3 RHS(0.999)T(0.99)S(0.012)PSPS(1)R 161.49 8.3068e-05 73200000.0 156340.0 150250.0 158740.0 238070.0 113610.0 141870.0 165100.0 128400.0 181740.0 116440.0 True False 147667.50854393654 143031.76447015218 168972.63439298008 260696.10122164426 122550.46064752435 140984.53670599562 181789.9192207235 127954.61036878529 148740.5972925729 115408.43218894924 1.2795209651767214 1.2393528077391902 1.464127284186084 2.258899945844744 1.0618848061888755 1.2216138286600464 1.575187495165804 1.108711104915585 1.2888191484054778 1.0 16.816389111182392 RHS(ph)VSEMTSCPEPQGFSDPPGQGPTGTFR ddPTM_KYSE-520_SHP099_60min_R1 2 RHSVSEMTSCPEPQGFSDPPGQGPTGTFR 29 1 P85299;P85299-5;P85299-2;P85299-4;P85299-3 P85299 PRR5 Proline-rich protein 5 1 RHS(0.495)VS(0.123)EMT(0.191)S(0.191)CPEPQGFSDPPGQGPTGTFR;RHS(0.49)VS(0.238)EMT(0.116)S(0.156)CPEPQGFSDPPGQGPTGTFR 92.469 3.1226e-06 918410000.0 170852.0 177830.0 181202.0 207758.0 149778.0 147180.0 150393.0 158589.0 199826.0 168865.0 True False 161374.49897498175 169286.77987172827 192882.5708534508 227503.2578552797 161564.67647975413 146261.3950263509 165596.19213423537 158038.89177395095 163542.63560353094 167368.9874749822 0.9641839949536859 1.011458469252153 1.152439133219243 1.3592915945033497 0.9653202717970933 0.8738858807293293 0.9894078624272504 0.9442543338417109 0.9771382265664766 1.0 17.3526727038724 -5.957844496545461 24.99990455057193 0.9514953311865795 1.1219144469196636 0.37923705846395683 0.10241209159199607 159.70217712183043 94709.08747192174 0.034012854082092446 0.03856691837350186 1.1019337972573628e-06 5.957844496545461 0.1704191157330841 RHS(ph)VTLPSSK ddPTM_KYSE-520_SHP099_60min_R1 5 RHSVTLPSSK 10 1 G3V2D5;G3V515;G3V2P5;Q07352 G3V2D5 ZFP36L1 Zinc finger protein 36, C3H1 type-like 1 1 RHS(0.999)VT(0.001)LPSSK;RHS(0.979)VT(0.021)LPSSK;RHS(0.978)VT(0.022)LPSSK;RHS(0.98)VT(0.02)LPSSK;RHS(0.998)VT(0.002)LPSSK 155.86 0.0001125 22310400000.0 20096250.0 19722550.0 20544570.0 21909840.0 18637300.0 20054670.0 21042120.0 21031010.0 25137190.0 21209320.0 True False 18981470.951618847 18775049.093848914 21868905.854674246 23992144.60616643 20103949.47826867 19929501.36562788 23169262.84090112 20958058.334984615 20572909.95299271 21021421.92540129 0.9029584686981872 0.8931388733110407 1.040315252330714 1.1413188266382428 0.956355357387885 0.9480567697252685 1.1021739120751144 0.9969857609708073 0.9786640516516812 1.0 24.32535692320445 -4.757895594698027 24.999700712589778 1.0227321626871717 0.8980486175548993 0.4144070236850602 0.05816794016059398 85.89971151611569 605954.910366054 0.015553506067589888 0.037913788082544225 1.7462419026705796e-05 4.757895594698027 -0.12468354513227242 RHS(ph)VVAGGGGGEGR ddPTM_KYSE-520_SHP099_60min_R1 6 RHSVVAGGGGGEGR 14 1 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 1 RHS(1)VVAGGGGGEGR;RHS(1)VVAGGGGGEGR;RHS(1)VVAGGGGGEGR;RHS(1)VVAGGGGGEGR;RHS(1)VVAGGGGGEGR;RHS(1)VVAGGGGGEGR 194.08 4.7855e-11 2347915600.0 1559730.4 1216074.8 1374026.5 1052781.8 838099.5 997810.7 1044886.8 1150786.7 1027892.0 1203816.6 True False 1473209.0454665315 1157652.7412425121 1462598.4467101318 1152837.8657416094 904053.1625161493 991582.9933022137 1150514.1548564536 1146794.8895333358 841252.7238486708 1193151.7214791426 1.2347206301979798 0.9702477232378942 1.2258277135928346 0.966212297219371 0.7577017626856377 0.83106194748892 0.9642647570672476 0.9611475798833543 0.7050676864512883 1.0 20.186346077493987 -5.482409526719457 5.9547340129011666 0.8696132538374005 1.1235118319235453 0.5492734062289135 0.11040024527332933 0.15567052662713712 14.89165963246003 0.03070928969047378 0.04469392889266066 3.2929904656502385e-06 5.482409526719457 0.2538985780861448 RHS(ph)WGPGK ddPTM_KYSE-520_SHP099_60min_R1 4 RHSWGPGK 8 1 Q12802-2;Q12802;Q12802-4;A8MYJ1;H0YMW2;A0A087WTD7;A0A087WY36;H0YLH1 Q12802-2 AKAP13 A-kinase anchor protein 13 1 RHS(1)WGPGK;RHS(1)WGPGK;RHS(1)WGPGK;RHS(1)WGPGK 145.91 0.00032935 35229900000.0 10438800.0 9831200.0 9752700.0 10721500.0 11199400.0 10257900.0 10591200.0 11683200.0 13225700.0 8736500.0 True False 9859738.954768106 9358894.395067949 10381374.646871716 11740468.136463474 12080729.064130653 10193876.64112521 11661861.856151 11642673.706079388 10824246.272765389 8659101.406894147 1.138656136642313 1.0808158901588385 1.1988974558730008 1.3558529441768663 1.3951481217799686 1.1772441691246525 1.3467750645426249 1.3445591128901435 1.2500426734981311 1.0 23.04578588722287 -4.993278477528398 4.724674469482311 1.2862819209535676 1.1131492559114142 0.23329904016788383 0.10989242751856342 0.21594008757491076 13.075803458153347 0.027946722728646 0.05692660548093452 1.0155972645835445e-05 4.993278477528398 -0.1731326650421534 RHS(ph)YAGEQPETVPYLLLNR ddPTM_KYSE-520_SHP099_60min_R1 5 RHSYAGEQPETVPYLLLNR 19 1 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 RHS(0.541)Y(0.432)AGEQPET(0.028)VPYLLLNR;RHS(0.838)Y(0.162)AGEQPETVPYLLLNR;RHS(0.981)Y(0.019)AGEQPETVPYLLLNR;RHS(1)YAGEQPETVPYLLLNR;RHS(1)YAGEQPETVPYLLLNR 251.51 8.832e-27 9463270000.0 2947720.0 3559730.0 3795160.0 3879400.0 3640570.0 3282110.0 3009160.0 3661790.0 4218390.0 3636540.0 True False 2784204.095465862 3388715.227536337 4039802.086070697 4248097.009615864 3927062.1469902103 3261625.1340531125 3313355.259371487 3649088.1051582065 3452436.712958163 3604323.0847853106 0.7724624097153326 0.9401807628846857 1.120821300155817 1.1786116032572311 1.0895422121194565 0.9049203019066725 0.91927254617044 1.012419813462855 0.9578599453338977 1.0 21.781296906759252 -9.325667097436268 14.144994658868113 0.9999999627993909 0.9957070948522505 0.0 0.11253009351963289 0.0 0.0 0.11896297510299461 0.02885275952278652 4.724250335283079e-10 9.325667097436268 -0.004292867947140344 RHSFT(ph)SLTMANK ddPTM_KYSE-520_SHP099_60min_R1 1 RHSFTSLTMANK 12 1 Q7Z6J0;Q7Z6J0-3;H0YA90 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 1 RHS(0.046)FT(0.908)S(0.046)LT(0.001)MANK 50.222 0.037292 8596900000.0 10011000.0 7589600.0 7244900.0 3640700.0 7213200.0 8004800.0 7457200.0 7661200.0 8687200.0 7219600.0 True False 9455669.873566274 7224984.223778138 7711917.8462498635 3986711.0333836335 7780837.802506142 7954839.073970202 8211046.551258508 7634625.085337522 7109823.466490805 7155639.960763812 1.321428960290639 1.0096908541227 1.0777397812824938 0.5571424855420033 1.0873713385763466 1.1116879996182873 1.1474929700602263 1.0669381253389085 0.9935971493082058 1.0 22.770649368691643 RHSHS(ph)HS(ph)PMSTR ddPTM_KYSE-520_SHP099_60min_R1 1 RHSHSHSPMSTR 12 1 P62995 P62995 TRA2B Transformer-2 protein homolog beta 2 RHS(0.435)HS(0.583)HS(0.981)PMSTR 48.216 0.045888 96386000.0 11678.0 11976.0 16071.0 24288.0 12857.0 12535.0 10567.0 8253.4 15422.0 8012.0 True False 11030.19806048415 11400.654983657512 17106.962374509167 26596.32421754653 13868.77275367678 12456.764415377833 11635.215483981754 8224.770881758039 12621.75355698283 7941.019913241676 1.3890152878336521 1.435666338608078 2.1542525470794063 3.3492327822018275 1.74647248151973 1.5686605186074574 1.4652041691244213 1.0357323078919884 1.5894373386390854 1.0 12.955108597984971 -6.372020276713926 2.402732907552868 1.2889685126846708 2.0716109397895788 0.3061867157013064 0.5335995180272549 0.42125849994658493 4.762804154725243 0.23432046267850948 0.20138888410124534 4.2459973940606594e-07 6.372020276713926 0.782642427104908 RHSLS(ph)STK ddPTM_KYSE-520_SHP099_60min_R1 4 RHSLSSTK 8 1 P42858;A0A3B3IU44 P42858 HTT Huntingtin 1 RHS(0.004)LS(0.897)S(0.098)T(0.001)K;RHS(0.002)LS(0.889)S(0.09)T(0.019)K;RHSLS(0.982)S(0.014)T(0.003)K;RHS(0.004)LS(0.961)S(0.029)T(0.006)K 110.31 0.00070917 12097900000.0 3186100.0 3704680.0 1927690.0 3044270.0 3758190.0 3964800.0 2367610.0 2778040.0 3026920.0 3545190.0 True False 3009360.6816671155 3526701.6119619547 2051951.9818130506 3333596.50550685 4053938.171823947 3940054.2125321133 2606951.1244468666 2768403.627639412 2477307.630443686 3513782.374716085 0.8564448109596637 1.0036767323266325 0.5839724157586308 0.9487202535632862 1.1537248866049956 1.1213142398582585 0.7419216236058186 0.7878699738378363 0.7050259140319849 1.0 21.74459341045976 -6.8091515782979055 24.999559004459922 0.7910267404133209 0.9406218135738061 0.1374417147832495 0.16427910291671652 246.03541918569178 128911.85024538584 0.07324902167099859 0.04938461150990609 1.5518452873910616e-07 6.8091515782979055 0.14959507316048526 RHSY(ph)AGEQPETVPYLLLNR ddPTM_KYSE-520_SHP099_60min_R1 1 RHSYAGEQPETVPYLLLNR 19 1 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 RHS(0.303)Y(0.69)AGEQPET(0.007)VPYLLLNR 60.541000000000004 0.043401 195620000.0 178870.0 188980.0 166490.0 160560.0 181110.0 176970.0 185940.0 203390.0 228280.0 181300.0 True False 168947.72453149498 179901.1171352371 177222.21179341857 175819.57412587586 195362.32662506052 175865.46458631146 204736.62979952383 202684.48756158265 186830.1064704996 179693.82304926575 0.9401977300309062 1.0011535960583047 0.9862454300659542 0.9784397212010583 1.087195560258624 0.9786951026029165 1.1393637595622428 1.1279435437578378 1.039713571118565 1.0 17.455181291691147 -5.794350980894993 1.076345908321538 1.0772598558404254 0.9695859414748057 0.3667420561516477 0.05149618765188945 0.5123133891689254 1.2670086697411598 0.02275294760520737 0.0331991137996078 1.6056431065714842e-06 5.794350980894993 -0.10767391436561968 RHT(ph)MDKDSR ddPTM_KYSE-520_SHP099_60min_R1 10 RHTMDKDSR 9 2 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;F6UYG0 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 1 RHT(1)MDKDSR;RHT(1)MDKDSR;RHT(1)MDKDSR;RHT(1)MDKDSR;RHT(1)MDKDSR;RHT(1)MDKDSR;RHT(1)MDKDSR;RHT(1)MDKDSR;RHT(1)MDKDSR;RHT(1)MDKDSR 146.36 0.00025962 19382050000.0 8950150.0 10382250.0 4552030.0 6038420.0 14474710.0 14965100.0 8293140.0 9100000.0 8751420.0 11576080.0 True False 8453667.337818313 9883471.125925036 4845461.137305521 6612309.621282834 15613787.327165958 14871697.259878013 9131491.52444671 9068434.22395597 7162382.733345271 11473524.937253946 0.736797748211597 0.8614154045923509 0.42231669550589096 0.5763102148157628 1.3608535661493872 1.2961750936358167 0.7958749882346292 0.7903790921751719 0.6242530323082649 1.0 23.451805353580696 -4.259840233826922 19.799956813511663 0.8570201398682629 0.7367971755602067 0.01644839957393307 0.28236380644268727 56.15837028443344 693849.7644916882 0.07772073882524967 0.46899291328760484 5.497430735110106e-05 4.259840233826922 -0.12022296430805612 RHT(ph)PLSK ddPTM_KYSE-520_SHP099_60min_R1 5 RHTPLSK 7 1 P61956-2;P61956;A8MUA9;A8MU27;P55854;P55854-2 P61956-2 SUMO2;SUMO3 Small ubiquitin-related modifier 2;Small ubiquitin-related modifier 3 1 RHT(1)PLSK;RHT(1)PLSK;RHT(1)PLSK;RHT(1)PLSK;RHT(1)PLSK 148.32 0.0025045 12231000000.0 6943730.0 8076100.0 3739130.0 5247790.0 9983500.0 11869900.0 6006290.0 6096820.0 6986060.0 14855300.0 True False 6558547.454917416 7688112.033526767 3980160.302619528 5746538.383794399 10769144.651655294 11795815.55118415 6613464.408941495 6075671.55442848 5717567.608241188 14723693.599248525 0.44544172362104534 0.5221591974665349 0.2703234942910432 0.3902919023041673 0.7314159710716158 0.8011451387297404 0.44917155904949263 0.4126458835531984 0.38832427269017633 1.0 23.811636296807347 -5.7376045726049005 24.858125897979434 0.6005535631570607 0.4055092983973617 0.24429320930773446 0.1881209971721616 381.54777154313916 397927.0918722834 0.05749986610550725 0.07418996748173655 1.8297654689375864e-06 5.7376045726049005 -0.19504426475969894 RHT(ph)VEDAVVSQGPEAAGPLSTPQEVSASR ddPTM_KYSE-520_SHP099_60min_R1 1 RHTVEDAVVSQGPEAAGPLSTPQEVSASR 29 1 Q96NW4 Q96NW4 ANKRD27 Ankyrin repeat domain-containing protein 27 1 RHT(0.999)VEDAVVS(0.001)QGPEAAGPLSTPQEVSASR 127.68 0.00020494 860060000.0 217850.0 205170.0 214310.0 184840.0 179880.0 209520.0 211180.0 257410.0 264400.0 189400.0 True False 205765.4262267917 195313.32523355173 228124.76550812414 202407.13802582756 194035.532622803 208212.3079625022 232528.13531818544 256517.10478994547 216391.62498160166 187722.0633509703 1.096117433154818 1.0404388367945252 1.2152261776582747 1.0782277501787396 1.0336320044598533 1.1091520317098944 1.2386830357998169 1.366472859987449 1.1527234525279533 1.0 17.518238697415374 -6.716636480930618 6.419442761392324 1.2199883043725415 1.0940748074848157 0.15414549613877926 0.09814930228931346 0.25889032486240926 25.94454868591479 0.037209344895213346 0.028255609342959086 1.920275403176091e-07 6.716636480930618 -0.1259134968877258 RHVTLPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 RHVTLPSSPR 10 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;X6RE05 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 RHVT(0.015)LPS(0.602)S(0.383)PR 58.098 0.029910000000000003 378390000.0 188320.0 224390.0 259290.0 481210.0 189490.0 181560.0 176720.0 150620.0 231250.0 177410.0 True False 177873.51419338738 213609.96758374316 276004.24827866827 526944.053718938 204401.78494938283 180426.81669373755 194584.58222099504 150097.53437497214 189260.82933810665 175838.28542289147 1.011574434802985 1.2148092042072107 1.5696482004182277 2.996753820998859 1.162441867866239 1.0260951775081897 1.1066110076825344 0.8536112258714718 1.0763345927932244 1.0 17.42388969836644 -5.976842335321759 24.999986438094194 1.0187057485940185 1.7076255499566162 0.30340459804758413 0.4946669265483326 312.0779426818478 336903.9121328173 0.163832286609678 0.18575855690320792 1.0547697466388295e-06 5.976842335321759 0.6889198013625977 RHYNGEAYEDDEHHPR ddPTM_KYSE-520_SHP099_60min_R1 2 RHYNGEAYEDDEHHPR 16 1 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 ; 62.104 0.031905 23504000.0 7084.1 14917.5 12495.099999999999 12806.1 4791.9 8994.6 5988.700000000001 7835.0 12391.900000000001 2932.3 False True 6691.130851196759 14200.840908375994 13300.55413886687 14023.187893705635 5168.995267818603 8938.461365022536 6594.096240079635 7807.822213702743 10141.843334377872 2906.3221032948804 2.302267475312204 4.886189625119867 4.5764212176579155 4.825063222623408 1.7785348919029116 3.075523306549214 2.268880050357786 2.6864958308822895 3.489579948100083 1.0 11.50497888820903 -5.758957594619006 24.999998475245572 2.4963970268711924 4.230888336449794 0.45605177574581623 0.9373191078935015 60.2648269266441 607065.4635698812 0.2733797964106758 0.3365612068170758 1.7419769551985333e-06 5.758957594619006 1.7344913095786012 RIACDEEFS(ph)DS(ph)EDEGEGGR ddPTM_KYSE-520_SHP099_60min_R1 1 RIACDEEFSDSEDEGEGGR 19 1 Q92769-3;Q92769 Q92769-3 HDAC2 Histone deacetylase 2 2 RIACDEEFS(1)DS(1)EDEGEGGR 124.08 1.6425999999999998e-05 0.0 240420.0 233540.0 209430.0 207320.0 232310.0 222500.0 224570.0 231840.0 258710.0 235630.0 True False 227083.42333461234 222320.38784931306 222930.19289984775 227023.63046696925 250591.4753369101 221111.2949678157 247271.72719199245 231035.80115186278 211734.78554837435 233542.50151736624 0.9723430290384485 0.9519483023640616 0.9545594118904761 0.9720870034017673 1.0730015894698983 0.9467711167398531 1.058786840020232 0.989266620211666 0.9066220673868638 1.0 17.83332559888394 -5.535775925252773 24.99653061862641 0.9983298985176585 0.9595955578631602 0.11539017288372466 0.045421152596158074 466.79904439382904 904717.4172274112 0.013261571785894344 0.017130011171452405 2.91221929346827e-06 5.535775925252773 -0.03873434065449832 RIDFIPVS(ph)PAPS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 8 RIDFIPVSPAPSPTR 15 1 Q96E09 Q96E09 FAM122A Protein FAM122A 2 RIDFIPVS(1)PAPS(0.88)PT(0.12)R;RIDFIPVS(0.999)PAPS(0.775)PT(0.226)R;RIDFIPVS(1)PAPS(0.897)PT(0.103)R;RIDFIPVS(1)PAPS(0.974)PT(0.026)R;RIDFIPVS(0.997)PAPS(0.601)PT(0.402)R;RIDFIPVS(1)PAPS(0.609)PT(0.391)R;RIDFIPVS(1)PAPS(0.975)PT(0.025)R;RIDFIPVS(1)PAPS(0.966)PT(0.034)R 125.03 5.9807e-05 5835821000.0 2948040.0 2817790.0 2808750.0 2272870.0 2597110.0 2484260.0 2285970.0 2543160.0 3245140.0 2546350.0 True False 2784506.344427958 2682419.1388109815 2989806.519158896 2488882.881436717 2801487.781465465 2468754.8118505436 2517058.1565172486 2534338.3715380067 2655904.3793222173 2523791.320030325 1.1033029245835193 1.0628529853168487 1.1846488635688672 0.9861682547536504 1.1100314670357943 0.9781929243741435 0.9973321235160617 1.0041790505514359 1.0523470614402084 1.0 21.267161195174076 -5.715780931025491 1.290106339866045 1.0097417877554902 1.10601887744613 0.38036361276581787 0.050591419102522454 0.45848597205650915 1.5981127224018739 0.019034975728511906 0.028474485280056073 1.9240620290702886e-06 5.715780931025491 0.09627708969063975 RIDFIPVS(ph)PAPSPT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RIDFIPVSPAPSPTR 15 1 Q96E09 Q96E09 FAM122A Protein FAM122A 2 RIDFIPVS(1)PAPS(0.192)PT(0.808)R 194.94 9.332799999999999e-11 1304100000.0 457900.0 474030.0 467410.0 388010.0 416440.0 379220.0 386830.0 377760.0 503580.0 388050.0 True False 432499.37419898034 451256.88726646395 497539.9964824417 424886.35374054004 449211.45878052106 376853.14731548313 425934.5514969869 376449.6387298472 412142.5662187406 384612.17889833165 1.1245077455368546 1.1732776860031495 1.2936147729579863 1.1047137273644536 1.1679595276135692 0.9798263497399557 1.1074390642465286 0.9787772186729372 1.071579603639349 1.0 18.553044921352885 -6.243848484038954 21.46749022368275 1.0311927143202022 1.1757682515568404 0.5977750217455868 0.05952717728302519 92.44389193768855 112815.55796265497 0.019387018131985335 0.01931448525007591 5.703632249790837e-07 6.243848484038954 0.14457553723663819 RIDFTPVS(ph)PAPS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 13 RIDFTPVSPAPSPTR 15 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 2 RIDFT(0.007)PVS(0.992)PAPS(0.863)PT(0.138)R;RIDFTPVS(1)PAPS(0.88)PT(0.12)R;RIDFTPVS(1)PAPS(0.867)PT(0.133)R;RIDFT(0.001)PVS(0.999)PAPS(0.947)PT(0.053)R;RIDFT(0.003)PVS(0.997)PAPS(0.983)PT(0.017)R;RIDFT(0.001)PVS(0.999)PAPS(0.998)PT(0.002)R;RIDFT(0.003)PVS(0.997)PAPS(0.846)PT(0.154)R;RIDFT(0.052)PVS(0.948)PAPS(0.965)PT(0.035)R;RIDFT(0.001)PVS(0.999)PAPS(0.989)PT(0.011)R;RIDFT(0.006)PVS(0.994)PAPS(0.849)PT(0.151)R;RIDFT(0.003)PVS(0.997)PAPS(0.602)PT(0.399)R;RIDFT(0.115)PVS(0.885)PAPS(0.882)PT(0.118)R;RIDFT(0.016)PVS(0.984)PAPS(0.665)PT(0.335)R 227.05 1.3079e-14 23682050000.0 10943500.0 10143780.0 10203760.0 8535600.0 9279730.0 9172980.0 8507610.0 8875452.0 11369210.0 9219120.0 True False 10336442.239673601 9656457.582675809 10861510.69619325 9346820.85767828 10009991.956558853 9115728.029275833 9367642.245072203 8844665.128558068 9304848.058460955 9137445.76916683 1.1312179027702287 1.0568005355785879 1.1886812759911594 1.0229139623698735 1.0954912575608733 0.9976232154543361 1.0251926503008248 0.9679581528574741 1.018320468708991 1.0 23.12335950800498 -6.002030684569479 1.0714161719277768 0.9957689578485084 1.1150856342604143 0.566532473936393 0.042804800958978526 0.3553618467049676 0.8698796799971631 0.019528406950278382 0.022813140092111602 9.953350906285872e-07 6.002030684569479 0.11931667641190591 RIDFTPVS(ph)PAPSPTR ddPTM_KYSE-520_SHP099_60min_R1 2 RIDFTPVSPAPSPTR 15 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 RIDFT(0.056)PVS(0.944)PAPSPTR;RIDFTPVS(0.999)PAPSPTR 131.56 2.3157e-05 1430210000.0 824790.0 665380.0 582930.0 608420.0 550610.0 747780.0 614790.0 626790.0 885220.0 640460.0 True False 779037.2545218975 633414.1460442586 620506.6005209767 666244.0538718562 593939.8744576478 743112.8276450937 676938.9729721904 624615.8117838862 724486.3625802317 634786.0226703399 1.2272438691147283 0.9978388361162864 0.9775051408830738 1.049556905914819 0.9356536742241652 1.17065089826499 1.0664049755294336 0.983978521071288 1.141307994672837 1.0 19.27591083631156 -6.259143941815734 24.99479606666183 1.0710881618118757 1.0326831273431705 0.035484199012233875 0.08906131179486312 817.2951036725474 8899455.999677481 0.029725645156771775 0.028403779004189972 5.506251679004926e-07 6.259143941815734 -0.038405034468705246 RIDFTPVSPAPS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 4 RIDFTPVSPAPSPTR 15 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3;Q7Z309-5 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 RIDFTPVS(0.002)PAPS(0.907)PT(0.09)R;RIDFTPVSPAPS(0.973)PT(0.027)R;RIDFT(0.01)PVS(0.089)PAPS(0.841)PT(0.06)R;RIDFTPVSPAPS(0.984)PT(0.016)R 194.99 2.2101e-11 2888030000.0 824720.0 870150.0 780248.0 686180.0 699382.0 824180.0 690988.0 728260.0 997980.0 797600.0 True False 778971.1375614388 828346.6878782224 830544.0345209405 751394.3408924603 754419.3844607593 819035.9869059519 760839.8104330072 725733.8360371622 816771.9890285139 790533.8845234105 0.9853734960786121 1.0478319830371448 1.0506115560393101 0.950489733081402 0.9543163161381457 1.036054245036852 0.962437948996576 0.9180300177451416 1.0331903603612407 1.0 19.592467776345185 -5.2580040670446735 24.94153915965007 0.9764330996062612 1.0299283092359979 0.24902408908928075 0.0385148440517276 387.17371918717225 2811012.6419523805 0.010558378655063682 0.0173509180409559 5.5207226925629475e-06 5.2580040670446735 0.05349520962973664 RIDIS(ph)PSTFR ddPTM_KYSE-520_SHP099_60min_R1 12 RIDISPSTFR 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RIDIS(0.976)PS(0.019)T(0.005)FR;RIDIS(0.333)PS(0.333)T(0.333)FR;RIDIS(0.871)PS(0.065)T(0.065)FR;RIDIS(0.665)PS(0.167)T(0.167)FR;RIDIS(0.998)PS(0.001)TFR;RIDIS(0.734)PS(0.207)T(0.059)FR;RIDIS(0.728)PS(0.245)T(0.028)FR;RIDIS(0.998)PS(0.001)T(0.001)FR;RIDIS(0.87)PS(0.117)T(0.013)FR;RIDIS(0.975)PS(0.022)T(0.003)FR;RIDIS(0.898)PS(0.099)T(0.003)FR;RIDIS(0.914)PS(0.061)T(0.025)FR 150.56 0.00016154 139294130000.0 3924623.0 3905998.0 3894345.0 3344961.0 3324446.0 3511787.0 3040776.0 2966209.0 4299448.0 3247073.0 True False 3706916.33864801 3718347.993057472 4145380.7098723133 3662865.087740804 3586060.9866897203 3489868.6347017563 3348167.3131939135 2955919.913297384 3518776.6234640563 3218306.459404569 1.151822048461426 1.1553741198858414 1.2880627628728887 1.1381343367836028 1.1142695799557853 1.0843804587048027 1.0403506799080193 0.9184706150837698 1.093362819187542 1.0 21.61787028084607 -6.255099939624292 1.1919355081448653 1.0032590602022597 1.1920068522818998 0.6529019632610309 0.055752224784618755 0.28102013091467426 0.8219910263553136 0.028284006277787706 0.02562787056772455 5.557763475845559e-07 6.255099939624292 0.1887477920796401 RIDIS(ph)PSTFRK ddPTM_KYSE-520_SHP099_60min_R1 2 RIDISPSTFRK 11 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RIDIS(0.999)PS(0.001)TFRK;RIDIS(0.876)PS(0.101)T(0.023)FRK 146.59 5.3218000000000004e-05 9114700000.0 3618300.0 4191700.0 3941800.0 2295050.0 2563200.0 2390600.0 1760770.0 2091850.0 3892900.0 2221500.0 True False 3417585.6860977784 3990324.4401300233 4195894.735102997 2513170.8619680554 2764909.2573869764 2375679.3786519566 1938765.8150591992 2084593.8605914616 3186047.4920229823 2201819.238300846 1.55216451316646 1.8122852097565352 1.9056490478941353 1.14140653249423 1.2557385317064764 1.0789620407192368 0.8805290558526293 0.9467597631675488 1.4470068371651026 1.0 21.070264602844354 -5.27273546688779 21.99023402657722 1.1005496921984472 1.7622581161749313 0.7497048656056089 0.17193752125721445 67.73176515192023 131854.55386687772 0.04978230811660809 0.07484091843589628 5.3365985406393905e-06 5.27273546688779 0.6617084239764841 RIDIS(ph)PSTLR ddPTM_KYSE-520_SHP099_60min_R1 15 RIDISPSTLR 10 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 RIDIS(0.67)PS(0.136)T(0.195)LR;RIDIS(0.637)PS(0.151)T(0.212)LR;RIDIS(0.984)PS(0.013)T(0.003)LR;RIDIS(0.649)PS(0.14)T(0.211)LR;RIDIS(0.996)PS(0.004)TLR;RIDIS(0.958)PS(0.038)T(0.004)LR;RIDIS(0.93)PS(0.06)T(0.01)LR;RIDIS(0.996)PS(0.003)T(0.001)LR;RIDIS(0.977)PS(0.022)T(0.001)LR;RIDIS(0.78)PS(0.205)T(0.014)LR;RIDIS(0.935)PS(0.044)T(0.021)LR;RIDIS(0.979)PS(0.011)T(0.011)LR;RIDIS(0.945)PS(0.049)T(0.006)LR;RIDIS(0.958)PS(0.029)T(0.012)LR;RIDIS(0.991)PS(0.008)T(0.001)LR 153.32 8.389e-05 209961510000.0 7618214.0 7018471.0 6525713.0 5270885.0 6246995.0 6377869.0 5499018.0 5614638.0 7527256.0 5673841.0 True False 7195616.482886893 6681293.118220251 6946370.9014899675 5771828.325650641 6738597.965960569 6338062.353820615 6054912.40468386 5595162.131244355 6160496.0570821185 5623575.182921509 1.2795448178126234 1.1880863864879008 1.235223265545683 1.0263627919796232 1.198276496138137 1.1270521238995728 1.0767016013358013 0.9949475110133775 1.095476784197926 1.0 22.42305618353529 -1.0000000000002052 0.18450979430499384 0.9858406931209954 2.245779975111599 0.6447931650769365 0.05678492404498804 34.703598722328195 0.3972569238737128 0.12146193753405798 12.350402275340098 0.09999999999995275 1.0000000000002052 1.259939281990604 RIDIS(ph)PSTLRK ddPTM_KYSE-520_SHP099_60min_R1 4 RIDISPSTLRK 11 2 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 RIDIS(0.945)PS(0.034)T(0.02)LRK;RIDIS(0.929)PS(0.057)T(0.014)LRK;RIDIS(0.753)PS(0.215)T(0.033)LRK;RIDIS(0.899)PS(0.029)T(0.072)LRK 118.08 0.00018524 14743370000.0 3508580.0 3781990.0 3823800.0 2716560.0 2924820.0 2745800.0 2152840.0 2323670.0 4281380.0 2536930.0 True False 3313952.073219173 3600297.5235172776 4070288.2662963173 2974741.045636452 3154986.694050631 2728662.4436972067 2370470.0768936537 2315609.731118657 3503989.316806844 2514454.7739016716 1.317960500867122 1.4318402386417581 1.618755806842556 1.1830560949086213 1.2547398850825413 1.0851905041279186 0.9427372094728126 0.9209192208001151 1.3935384136457203 1.0 21.26181417402162 -5.7353026864141645 1.5808947596811438 1.0608376008439273 1.4457175902515784 0.5156830911024204 0.15227978623970023 0.29880487889077884 1.5491439859363443 0.05556041555363906 0.0770614113487926 1.8394895017378763e-06 5.7353026864141645 0.3848799894076511 RIDISPS(ph)TFR ddPTM_KYSE-520_SHP099_60min_R1 2 RIDISPSTFR 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 RIDIS(0.045)PS(0.477)T(0.477)FR;RIDIS(0.177)PS(0.411)T(0.411)FR 106.79 0.0023055 6862500000.0 2369430.0 2334820.0 2317570.0 1817430.0 1967440.0 1986680.0 1804130.0 1879470.0 2596640.0 1948600.0 True False 2237992.9945584 2222651.7425637287 2466964.270443111 1990158.0007697474 2122266.3347976855 1974280.39319847 1986509.0670120176 1872950.557241595 2125155.631967573 1931336.9199878592 1.1587791707375783 1.150835837890833 1.2773350133329502 1.0304561468137097 1.0988586780658791 1.0222351018955722 1.0285668163090391 0.9697689397732678 1.1003546869393104 1.0 20.881168432419425 -5.281691576867765 24.647025203878307 1.0362562632548926 1.1911685876236027 0.6894927875275569 0.04914527038533477 367.75036495195707 447553.1727368365 0.013691903745910016 0.020338254995050313 5.227673111297156e-06 5.281691576867765 0.15491232436871005 RIDISPS(ph)TLR ddPTM_KYSE-520_SHP099_60min_R1 1 RIDISPSTLR 10 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 RIDIS(0.31)PS(0.528)T(0.162)LR 61.532 0.050468 4575200000.0 5743000.0 5572500.0 5143100.0 4499000.0 5087600.0 4627500.0 4255400.0 4732300.0 6417400.0 4990200.0 True False 5424424.341613334 5304788.735506967 5474632.455250951 4926583.607326332 5487965.175515752 4598618.0560160335 4685577.360701806 4715884.755827124 5252161.929489145 4945990.710316851 1.0967316073397626 1.0725432064483458 1.1068828827016206 0.9960761950179086 1.1095785449148532 0.9297668203103916 0.9473485971027304 0.9534762663403819 1.0619029102771365 1.0 22.23782809934875 -6.258757268486172 24.9998583416578 0.9736442898066989 1.0733855338040863 0.5375074220973182 0.04523510373908688 189.88106029409815 1769881.5228883626 0.015201021692326585 0.014565255486904993 5.511156343626908e-07 6.258757268486172 0.09974124399738737 RIDISPSTFR ddPTM_KYSE-520_SHP099_60min_R1 2 RIDISPSTFR 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ; 158.56 0.00030129 283030000.0 120993.0 99896.0 92752.0 88615.0 89099.0 94382.0 79994.0 79883.0 114329.0 81553.0 False True 114281.27709643425 95096.84621304713 98730.94232844716 97036.94295692864 96110.5843960371 93792.92692877472 88080.57418620578 79605.90451783239 93569.73559955193 80830.50386727386 1.4138384845910101 1.1764970111926933 1.2214564750278727 1.2004990481844113 1.1890385411162796 1.160365486311771 1.089694731222222 0.9848497870129289 1.1576042598125613 1.0 16.302612220461636 -1.000000000172333 0.1878186374269503 0.9918129628864688 2.5688168006041683 0.7179471003163997 0.06106085139054891 29.994670561474784 0.34750245145183906 0.12678114591640818 13.67020224322395 0.09999999996031886 1.000000000172333 1.5770038377176996 RIDISPSTLR ddPTM_KYSE-520_SHP099_60min_R1 3 RIDISPSTLR 10 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 0 ;; 134.38 0.00087744 0.0 171027.0 161100.0 153932.0 114010.0 142332.0 136913.0 121896.0 133306.0 171678.0 112024.0 False True 161539.79137612798 153360.5141839701 163854.70301990822 124845.47612164366 153532.71864169888 136058.47518170124 134218.4372703171 132843.59259985422 140505.60285019458 111031.5545133532 1.4548998443203855 1.3812336038718274 1.4757489772891745 1.1244143763350547 1.3827845544865742 1.2254036771622268 1.2088314701040717 1.196449002106674 1.265456504378642 1.0 16.76061021471092 -1.0000000003317493 0.07428269794874139 0.7460259237937654 2.5827102320348145 0.6459179717829364 0.08558077604056707 138.82136190648794 0.7590936525148074 3.078801391639693 26.416859632217758 0.0999999999236119 1.0000000003317493 1.8366843082410491 RIDT(ph)PSLEEPSDLEELEQFAK ddPTM_KYSE-520_SHP099_60min_R1 5 RIDTPSLEEPSDLEELEQFAK 21 1 P14859-6;P14859-2;P14859;P14859-3;P14859-5;P14859-4;A0A0C4DG88 P14859-6 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 RIDT(0.959)PS(0.041)LEEPSDLEELEQFAK;RIDT(0.967)PS(0.033)LEEPSDLEELEQFAK;RIDT(0.5)PS(0.5)LEEPSDLEELEQFAK;RIDT(0.791)PS(0.209)LEEPSDLEELEQFAK;RIDT(0.969)PS(0.031)LEEPSDLEELEQFAK 266.17 2.4872e-35 418215000.0 438617.0 450644.0 340345.0 266418.0 286070.0 344821.0 268475.0 329027.0 449643.0 348349.0 True False 414286.04064868763 428994.3858095651 362284.18327125354 291738.28661850776 308582.08148435206 342668.84423414455 295615.0730634997 327885.6821324795 367999.1657776184 345262.8988714208 1.199914737444673 1.2425151593520236 1.0492994887532692 0.8449743299153433 0.8937597479863336 0.9924867263590857 0.8562028356646265 0.9496696088813968 1.065852041967199 1.0 18.39733578838491 -4.928328769367823 3.815259466973135 0.9375585711755433 1.2195283985572334 0.7400600359189193 0.0651397667188202 0.10437969134927427 3.0117811456776984 0.017756407879981843 0.039933517385730664 1.179427448101582e-05 4.928328769367823 0.2819698273816901 RIDTPS(ph)LEEPSDLEELEQFAK ddPTM_KYSE-520_SHP099_60min_R1 1 RIDTPSLEEPSDLEELEQFAK 21 1 P14859-6;P14859-2;P14859;P14859-3;P14859-5;P14859-4;A0A0C4DG88 P14859-6 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 RIDT(0.205)PS(0.792)LEEPS(0.003)DLEELEQFAK 74.029 0.0044144 0.0 16548.0 14442.0 10848.0 10003.0 11830.0 11333.0 11811.0 14055.0 17305.0 14352.0 True False 15630.049452379844 13748.184642116046 11547.27943741369 10953.68211248838 12760.953696507453 11262.266543237105 13004.971144251762 14006.246485461668 14162.848223549985 14224.852445687036 1.0987846455390728 0.9664904922289359 0.8117679590353021 0.770038364497027 0.8970886513748383 0.7917316953717727 0.9142429556937063 0.9846321105220568 0.9956411342491042 1.0 13.796126067091524 -7.20111422555631 3.73116405421984 0.9943897189609091 0.8824123514431658 0.20952515332005917 0.08959291810938784 0.38804217783618533 10.83841737795028 0.05156630776562959 0.026944896248470455 6.293406356498118e-08 7.20111422555631 -0.11197736751774334 RIEQHYFEDR ddPTM_KYSE-520_SHP099_60min_R1 4 RIEQHYFEDR 10 1 C9JNK6;O75431-2;O75431 C9JNK6 MTX2 Metaxin-2 0 ;;; 117.09 0.0011474999999999999 2974920000.0 2509950.0 2323440.0 1720260.0 1521280.0 2263390.0 2144320.0 1716760.0 1946820.0 1978560.0 1723160.0 False True 2370718.0700387205 2211818.4548454583 1831150.712113316 1665861.9938104898 2441505.9160725265 2130936.503484882 1890306.8547629914 1940066.935811205 1619303.3794387197 1707894.1429981955 1.3880942678783021 1.2950559400377282 1.0721687404459064 0.975389488066328 1.4295417114004976 1.2476982324818087 1.1068056310823642 1.1359409737218444 0.9481286566133686 1.0 20.703787127359686 -7.407588700239171 1.5195435058078175 0.977927647304003 1.2226966581520693 0.35014515104003263 0.1315518684743306 0.5320218965462663 2.1648285278210793 0.12124969496182922 0.04238519297411471 3.9121121804693164e-08 7.407588700239171 0.24476901084806635 RIEYIEAR ddPTM_KYSE-520_SHP099_60min_R1 4 RIEYIEAR 8 1 Q8WUW1;Q8WUW1-2 Q8WUW1 BRK1 Protein BRICK1 0 ;;; 183.27 1.9958e-05 1466800000.0 1467740.0 1353810.0 920670.0 871620.0 1402730.0 1252520.0 976180.0 1072380.0 1155610.0 1088580.0 False True 1386321.5363328494 1288770.9354897614 980017.8613240842 954458.5027378916 1513116.870558066 1244702.5580812953 1074861.800998703 1068660.1640753737 945780.354557446 1078936.0281024238 1.284896880096811 1.1944831777991363 0.9083187842449644 0.8846293736400139 1.4024157421263028 1.1536388865152767 0.9962238473852002 0.9904759283596056 0.8765861273729407 1.0 20.041177896916178 -6.868591132670278 4.344297243871831 0.9578879693388654 1.130403193457706 0.24440254476544998 0.14898073285732785 0.37535010765115384 12.452820848290145 0.07039200684416594 0.04665711594592561 1.3533460737478973e-07 6.868591132670278 0.17251522411884046 RIGS(ph)VTSR ddPTM_KYSE-520_SHP099_60min_R1 1 RIGSVTSR 8 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 RIGS(0.964)VT(0.036)SR 68.536 0.01814 0.0 149930.0 150510.0 122030.0 136530.0 147240.0 106190.0 92186.0 108200.0 134360.0 116490.0 True False 141613.08402195497 143279.27367988406 129896.24905490357 149505.77015075876 158826.9503189989 105527.22882081942 101505.06052865925 107824.67945406993 109963.61093996966 115457.98922784865 1.2265334341003546 1.240964567615429 1.1250520637299684 1.2948932434265685 1.3756254667276813 0.913988105340796 0.8791514663255201 0.9338866905198315 0.9524123161625809 1.0 16.81700847968926 -6.274463177512971 24.9742868326257 0.9282095949120776 1.247228676626458 0.8547771397672417 0.06521743230470206 291.07985518325165 558169.8931463341 0.024185850329441892 0.021458136826546303 5.315410653204427e-07 6.274463177512971 0.3190190817143804 RILS(ph)DVTHSAVFGVPASK ddPTM_KYSE-520_SHP099_60min_R1 2 RILSDVTHSAVFGVPASK 18 1 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 RILS(0.938)DVT(0.061)HS(0.001)AVFGVPASK;RILS(0.676)DVT(0.257)HS(0.067)AVFGVPASK 194.62 8.462299999999999e-13 2415600000.0 2600530.0 3112500.0 3547900.0 2401910.0 2175800.0 2150770.0 1499070.0 1614430.0 3086600.0 1780420.0 True False 2456273.416871969 2962970.828042255 3776603.310840709 2630186.8042394267 2347023.0813914537 2137346.246642379 1650610.6251133264 1608829.919140795 2526151.246854053 1764646.8639458013 1.3919348211005067 1.6790729570770702 2.140146784040471 1.4904890366326626 1.3300242271382516 1.2112033802974105 0.9353773034353816 0.9117007782188244 1.4315335824219844 1.0 20.75094807372298 -5.872260969492156 1.8691981489086535 1.0806960936761825 1.7324203304634533 0.6037727837880689 0.22404915497366157 0.23151742809705217 1.6607599284764787 0.0831681597277146 0.10044748363228195 1.3419583300591895e-06 5.872260969492156 0.6517242367872709 RINPPSSGGTSS(ph)SPIK ddPTM_KYSE-520_SHP099_60min_R1 2 RINPPSSGGTSSSPIK 16 1 P14859-6;P14859-2;P14859;P14859-3;P14859-5;P14859-4;A0A0C4DG88;A0A0A0MT46 P14859-6 POU2F1 POU domain, class 2, transcription factor 1;POU domain protein 1 RINPPSSGGT(0.001)S(0.008)S(0.671)S(0.32)PIK;RINPPSSGGTS(0.02)S(0.778)S(0.201)PIK 137.05 1.2803e-05 1727290000.0 1958640.0 1829370.0 1784700.0 1559350.0 1593930.0 1746520.0 1548990.0 1738570.0 2385000.0 1838110.0 True False 1849990.3347479615 1741484.3192596496 1899744.617620965 1707550.1551643284 1719363.2227788777 1735619.3208413029 1705577.0258855782 1732539.30645529 1951944.120957336 1821825.7754279384 1.0154595240115138 0.955900582123767 1.0427696452887893 0.9372741225835565 0.9437583143069799 0.9526812850332046 0.9361910721045464 0.9509906654209701 1.0714219478527431 1.0 20.79695356746282 -7.750720233198081 24.99990728426914 1.0357109816164893 0.9657883500836387 0.35750349664708425 0.03688741903907072 199.05484420325723 464255.8207049655 0.025604865617502075 0.009465673686071976 1.7753327586571397e-08 7.750720233198081 -0.06992263153285061 RIPHS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 6 RIPHSPAR 8 1 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 RIPHS(1)PAR;RIPHS(1)PAR;RIPHS(1)PAR;RIPHS(1)PAR;RIPHS(1)PAR;RIPHS(1)PAR 97.163 0.0020870000000000003 86180300000.0 1092480.0 940365.0 941391.0 858419.0 915536.0 913017.0 859396.0 870171.0 1059250.0 840392.0 True False 1031877.9565951134 895188.4538833586 1002074.5701388555 940002.8836669159 987583.4745127342 907318.5222365401 946272.1345767002 867152.579900439 866916.9015195218 832946.7806950825 1.2388281946825288 1.0747246698478579 1.2030475336042936 1.1285269424806428 1.1856501488469762 1.089287507035438 1.1360535348813632 1.041066008054935 1.0407830627499295 1.0 19.667864795141618 -7.265104769927306 0.7966521405883867 0.9991908030668648 1.1630863571541727 0.6232446762660658 0.045591882169115416 0.3960314727639222 0.46884806976628596 0.03843168241381724 0.017300022083631555 5.431192926803567e-08 7.265104769927306 0.16389555408730794 RIPHSPAR ddPTM_KYSE-520_SHP099_60min_R1 1 RIPHSPAR 8 1 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 0 136.57 0.021937 0.0 86630.0 80228.0 73030.0 59356.0 75684.0 73226.0 74149.0 69035.0 82733.0 58030.0 False True 81824.46120737637 76373.7264553169 77737.63065213141 64997.17639396787 81639.90021694594 72768.96937219446 81644.70454450304 68795.53369789015 67710.77272920903 57515.899346656865 1.4226407330294566 1.327871550699418 1.3515850666542684 1.1300731994508204 1.4194318639597399 1.2651974532051578 1.4195153943854426 1.196113326564699 1.177253133452824 1.0 15.811673200612981 -7.913956852810415 1.4181811167567027 1.0057682146756473 1.32648492623935 0.5822798592407383 0.08779952983579108 0.27849971877618795 1.2453753859821561 0.08049341327501604 0.024376310899373584 1.2191107116497855e-08 7.913956852810415 0.32071671156370285 RIPS(ph)IVS(ph)SPLNS(ph)PLDR ddPTM_KYSE-520_SHP099_60min_R1 2 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 3 RIPS(1)IVS(0.665)S(0.335)PLNS(1)PLDR;RIPS(1)IVS(0.888)S(0.112)PLNS(1)PLDR 115.11 0.00011467 70700000.0 67134.0 62679.0 58333.0 54959.0 60814.0 67937.0 77356.0 92731.0 96758.0 85339.0 True False 63409.94319168895 59667.806756902915 62093.23851610002 60182.28683597415 65599.71581567235 67512.97998304942 85175.89940180667 92409.337804578 79189.18627068769 84582.9628527374 0.7496774888589374 0.7054352879643995 0.734110468844737 0.7115178377086898 0.7755665396810973 0.798186510687648 1.0070101179844173 1.0925289761422363 0.9362309335103275 1.0 16.368079476899904 -6.6830524670469 2.960745977753396 1.020976475832104 0.7347370070683458 0.9121702880586704 0.04033054849620531 0.06774065616542986 1.1996622211421322 0.017292343422478578 0.012417439455949255 2.0746628626258073e-07 6.6830524670469 -0.2862394687637583 RIPS(ph)IVS(ph)SPLNSPLDR ddPTM_KYSE-520_SHP099_60min_R1 1 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 2 RIPS(0.999)IVS(0.648)S(0.351)PLNS(0.001)PLDR 53.443999999999996 0.047404 491770000.0 281590.0 211500.0 213440.0 248320.0 258390.0 251590.0 289530.0 307090.0 337800.0 313540.0 True False 265969.64136425196 201339.22253202778 227198.68391607457 271920.2581398694 278723.8229620083 250019.73348742787 318798.5179404973 306024.77646534453 276464.03524502646 310762.2795304286 0.8558620491719275 0.6478882277355462 0.7311012271482202 0.8750105017595742 0.8969036505433304 0.8045369401499288 1.0258597614298999 0.9847552184510856 0.8896318937509796 1.0 18.24545187381639 -5.842452606043302 0.8432631470448425 0.9666118282277913 0.7309938745485063 0.5585338970795315 0.07534574225920777 0.46662091398721733 0.7265747071376139 0.0416036173941492 0.06274200604264916 1.437299895349764e-06 5.842452606043302 -0.23561795367928506 RIPS(ph)IVSS(ph)PLNSPLDR ddPTM_KYSE-520_SHP099_60min_R1 2 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 2 RIPS(0.997)IVS(0.119)S(0.883)PLNSPLDR;RIPS(0.997)IVS(0.443)S(0.56)PLNSPLDR 68.445 0.015590000000000001 1105560000.0 554720.0 575020.0 484200.0 555800.0 597370.0 623460.0 605440.0 748410.0 774600.0 681920.0 True False 523948.5757930952 547395.1760773839 515412.30674739246 608623.0648926365 644379.6204296419 619568.7548792557 666643.7837249845 745813.9403902073 633952.166076962 675878.7193257324 0.7752109377194104 0.8099014814721112 0.7625810548696904 0.90049153419094 0.9533953385490306 0.9166862887728549 0.9863364012851878 1.1034730330527989 0.9379673422909408 1.0 19.36640486484233 -5.677297542917897 0.855748306342252 1.0120237884298064 0.7648826074193485 0.777682067583856 0.048053764159987515 0.29524406919231116 0.4596119816034614 0.024447254248591326 0.045122528186699824 2.1023375971564102e-06 5.677297542917897 -0.2471411810104579 RIPSIVS(ph)SPLNSPLDR ddPTM_KYSE-520_SHP099_60min_R1 1 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 RIPS(0.036)IVS(0.479)S(0.479)PLNS(0.006)PLDR 63.827 0.030041 41692000.0 47941.0 55384.0 56795.0 43769.0 47778.0 44493.0 43101.0 51252.0 63851.0 53629.0 True False 45281.61716198582 52723.26950692119 60456.096575212985 47928.79260037028 51537.8567803663 44215.302683159665 47458.069705223585 51074.21877430674 52257.26795272412 53153.88878273062 0.8518966005869649 0.9918986308307638 1.137378618191616 0.9016987034811659 0.9695971068274998 0.8318357075225877 0.8928428529323791 0.9608745464151336 0.983131604280705 1.0 15.697887623936637 -4.2499938514490605 23.643200653745417 0.9594375258798764 0.8518964622436037 0.15731207817654813 0.07686326172524142 1731.5166468318707 3576675.2543669217 0.02051950124670755 0.294990312541707 5.623492866287348e-05 4.2499938514490605 -0.1075410636362727 RIPSIVSS(ph)PLNS(ph)PLDR ddPTM_KYSE-520_SHP099_60min_R1 8 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 2 RIPSIVS(0.043)S(0.957)PLNS(1)PLDR;RIPS(0.011)IVS(0.166)S(0.825)PLNS(0.999)PLDR;RIPSIVS(0.164)S(0.836)PLNS(1)PLDR;RIPSIVS(0.181)S(0.819)PLNS(1)PLDR;RIPSIVS(0.002)S(0.998)PLNS(1)PLDR;RIPSIVS(0.407)S(0.593)PLNS(1)PLDR;RIPSIVS(0.246)S(0.754)PLNS(1)PLDR;RIPSIVS(0.213)S(0.787)PLNS(1)PLDR 180.16 6.040999999999999e-09 3897612000.0 1906576.0 2078317.0 1997112.0 1807295.0 1927084.0 2120592.0 2106996.0 2502997.0 3148526.0 2491927.0 True False 1800814.4286149712 1978471.5317025834 2125849.035012181 1979059.7734169427 2078734.547191914 2107356.598734336 2319991.7179793306 2494314.6876108935 2576833.046281474 2469850.4654698665 0.72911880852365 0.801049115872769 0.8607197337381142 0.8012872848318146 0.8416438874555321 0.8532324641497803 0.9393247690151044 1.0099051430372215 1.0433154080812965 1.0 21.235992267305953 -6.851180997623965 1.248251496181598 1.0307014398695553 0.8041179154016441 0.8903904501132732 0.032872534625421446 0.14728943471217054 0.45241108524087376 0.023348722835566982 0.01235409379724051 1.408701582169868e-07 6.851180997623965 -0.2265835244679112 RIPSIVSS(ph)PLNSPLDR ddPTM_KYSE-520_SHP099_60min_R1 4 RIPSIVSSPLNSPLDR 16 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 RIPSIVS(0.001)S(0.999)PLNSPLDR;RIPS(0.067)IVS(0.128)S(0.806)PLNSPLDR;RIPSIVS(0.226)S(0.773)PLNSPLDR;RIPSIVS(0.039)S(0.961)PLNSPLDR 121.48 4.7431999999999996e-05 2487048000.0 947235.0 967439.0 942878.0 786242.0 771991.0 889489.0 684802.0 847189.0 1227720.0 946296.0 True False 894689.9862838415 920961.7782844553 1003657.4245381401 860966.2032877227 832742.2996720622 883937.3692118075 754028.469183464 844250.2990943985 1004796.9963026176 937912.5536471467 0.9539162076515227 0.9819271260451979 1.0700970155856633 0.9179599952466655 0.8878677403707609 0.9424517944392018 0.8039432527599348 0.9001375403404772 1.0713120241278205 1.0 19.83909389365868 -5.306320343929223 24.2600892282223 0.9210590239109487 0.9999748567040118 0.15411768036203366 0.07203791366882557 498.060631341955 269221.97394382424 0.020576092716756162 0.030519472835933877 4.939462083947897e-06 5.306320343929223 0.07891583279306302 RIPVLS(ph)PKPAVAPPAPPSSSQLCR ddPTM_KYSE-520_SHP099_60min_R1 1 RIPVLSPKPAVAPPAPPSSSQLCR 24 2 Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4;G3V411;Q6PJT7-8 Q6PJT7-5 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 RIPVLS(1)PKPAVAPPAPPSSSQLCR 86.785 0.0035826 997720000.0 539760.0 536710.0 455030.0 351590.0 370500.0 482190.0 348080.0 444040.0 627570.0 417670.0 True False 509818.4368151163 510925.64598186547 484361.96187374135 385005.00789061177 399656.2421433658 479180.47335070156 383267.3233334313 442499.7288797156 513619.1077522834 413969.7687423425 1.2315354291787202 1.234210042762492 1.1700418688670269 0.9300317002864077 0.9654237394134799 1.1575252821153388 0.9258340880731787 1.0689179797453527 1.2407164641821062 1.0 18.65916588931601 -5.054266641929258 6.231713379766701 1.0409831462858765 1.2262881028518282 0.42167385958717274 0.09346634137029712 0.202807110277753 17.79362637061481 0.02586042808805141 0.04626939981046067 8.825378860277065e-06 5.054266641929258 0.1853049565659517 RIPVLS(ph)PKPVAPPAPPSSSQLCR ddPTM_KYSE-520_SHP099_60min_R1 2 RIPVLSPKPVAPPAPPSSSQLCR 23 2 H0YJA2;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-11;Q6PJT7-6 H0YJA2 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 RIPVLS(1)PKPVAPPAPPSSSQLCR;RIPVLS(0.999)PKPVAPPAPPSSSQLCR 92.822 0.0022201 477430000.0 201200.0 252565.0 249884.0 213270.0 170014.0 255035.0 193921.0 216049.0 295753.0 292984.0 True False 190039.0349177435 240431.39829220634 265991.9224685362 233539.1166780363 183393.13455266433 253443.23196457012 213524.42716657725 215299.57644521582 242051.7105264133 290388.3896981031 0.654430554593846 0.8279649146516028 0.9159867677391293 0.8042302136143629 0.6315443077573645 0.8727732958885086 0.7353063508791241 0.7414193682779397 0.8335447253179022 1.0 18.147624247123723 -8.092464754681691 5.147041021695899 0.9999856800267425 0.7782533845032595 0.39635819530014815 0.08433661276118773 0.6887656349958118 36.63435233338386 0.08219763647002147 0.021403067373840942 8.082305186772372e-09 8.092464754681691 -0.22173229552348295 RIPVS(ph)PEQAR ddPTM_KYSE-520_SHP099_60min_R1 2 RIPVSPEQAR 10 1 C9J7L6;Q9H981-2;Q9H981 C9J7L6 ACTR8 Actin-related protein 8 1 RIPVS(1)PEQAR;RIPVS(1)PEQAR 114.56 0.00044814 1094450000.0 611450.0 591800.0 698540.0 510650.0 631472.0 673040.0 592760.0 578200.0 747240.0 621260.0 True False 577531.6496046437 563369.0396900902 743569.0061035177 559182.0224674793 681165.2538158038 668839.3077084881 652681.96558011 576194.3591528942 611560.0523874887 615756.1197329658 0.9379227117630615 0.9149223558417995 1.2075706310900822 0.908122557856151 1.1062257149976908 1.0862081370763197 1.059968296966594 0.9357509258743083 0.9931855044375412 1.0 19.231999535552486 RIQEIIEQLDVTTSEYEK ddPTM_KYSE-520_SHP099_60min_R1 1 RIQEIIEQLDVTTSEYEK 18 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 100.02 0.0017756 165370000.0 234060.0 304820.0 298120.0 205040.0 223370.0 167940.0 169560.0 160800.0 331380.0 147900.0 False True 221076.2252129575 290175.9896558522 317337.29220886534 224526.9399524764 240947.94819855178 166891.82416582003 186700.7795461288 160242.22233100195 271209.74540999695 146589.72106445892 1.5081291076046535 1.9795111659176639 2.164799072571567 1.5316690578444219 1.6436892467555848 1.13849608931607 1.2736280428832532 1.093134096766169 1.8501279860594024 1.0 17.161424419046057 -5.81993371564888 1.813928199024529 1.284126708422333 1.8752870346759538 0.444722219092786 0.2798414638332848 0.3102521538842862 2.1057698957052797 0.09801225045895041 0.1235955579394953 1.5137922738945198e-06 5.81993371564888 0.5911603262536209 RIQPQPPDEDGDHS(ph)DKEDEQPQVVVLK ddPTM_KYSE-520_SHP099_60min_R1 3 RIQPQPPDEDGDHSDKEDEQPQVVVLK 27 2 Q96AT1 Q96AT1 KIAA1143 Uncharacterized protein KIAA1143 1 RIQPQPPDEDGDHS(1)DKEDEQPQVVVLK;RIQPQPPDEDGDHS(1)DKEDEQPQVVVLK;RIQPQPPDEDGDHS(1)DKEDEQPQVVVLK 98.883 0.0020853 5020490000.0 2182860.0 2147140.0 2104870.0 1771680.0 1725130.0 1823700.0 1698360.0 1621630.0 2521810.0 1769890.0 True False 2061772.4043764705 2043988.1714771567 2240553.288111074 1940059.9345249825 1860887.9163529917 1812317.611832835 1870046.8031962924 1616004.9440212864 2063912.8736567823 1754210.1515535824 1.1753280543670903 1.1651900256459797 1.2772433713981024 1.1059449934244228 1.0608124201680922 1.0331245718922506 1.0660335088929462 0.9212151363906445 1.1765482441364952 1.0 20.74239016000474 -5.534763602615146 3.3855749586977275 1.040117820604 1.2020743521891937 0.5451869854906743 0.06618920464004696 0.1738981885670025 4.196070532331381 0.019052746567275354 0.026961722240074804 2.919015475016307e-06 5.534763602615146 0.16195653158519363 RIQQHVGEEAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RIQQHVGEEASPR 13 1 Q8TER5-4;Q8TER5-3;Q8TER5;Q8TER5-2 Q8TER5-4 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 RIQQHVGEEAS(1)PR;RIQQHVGEEAS(1)PR 82.59 0.0042871 76146000.0 54003.0 53993.0 55751.0 43901.0 50033.0 48567.0 40764.0 46300.0 62033.0 38752.0 True False 51007.34593768845 51399.095234854736 59344.7986647539 48073.337840683074 53970.312451171354 48263.87533798607 44884.82293830148 46139.39610650123 50769.37092467362 38408.6874285998 1.3280158566342328 1.3382153537634833 1.5450879120790963 1.2516266776897667 1.4051589904367336 1.2565874693767307 1.1686112164530629 1.2012750030126 1.321819992392394 1.0 15.229145041866593 -6.445279035169257 3.375977499325087 1.1904510123025824 1.3744113942658467 0.4617313401555202 0.10158353361208504 0.24538621954506454 5.394928836020503 0.037734036063551704 0.0317209427114875 3.5869140057203305e-07 6.445279035169257 0.18396038196326425 RIS(ph)AVEPK ddPTM_KYSE-520_SHP099_60min_R1 1 RISAVEPK 8 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;E9PK58;E9PLU6;E9PRE3;E9PRJ0;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 RIS(1)AVEPK 57.567 0.029175 577070000.0 1171000.0 1045000.0 961620.0 855250.0 710730.0 870710.0 819430.0 889200.0 987250.0 1022500.0 True False 1106042.2956693724 994796.6314230214 1023607.5638464006 936532.7028597111 766660.4074994716 865275.575916524 902265.9812661265 886115.5727408405 807990.2865472254 1013441.4454929635 1.091372669420842 0.9816024752561083 1.0100312834043332 0.924111311042897 0.7564920606997166 0.8537992794399998 0.8902990747800348 0.8743628718576942 0.7972737745634614 1.0 19.950831304663463 -5.377893068549453 3.184825375566716 0.8558365078168073 1.0253257106846523 0.5572067542864438 0.06546508628257242 0.18159351009440808 3.4745632172243357 0.018611946560130113 0.029392039054563092 4.188966926473394e-06 5.377893068549453 0.16948920286784497 RIS(ph)AVSVAER ddPTM_KYSE-520_SHP099_60min_R1 4 RISAVSVAER 10 1 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 RIS(0.94)AVS(0.06)VAER;RIS(1)AVSVAER;RIS(0.937)AVS(0.063)VAER;RIS(1)AVSVAER 159.66 5.7336e-05 792100000.0 1115173.0 1144227.0 1133978.0 941903.0 962002.0 1157850.0 1048900.0 913493.0 1178780.0 1087101.0 True False 1053312.1306477378 1089256.6174002578 1207076.0363089512 1031421.1779265365 1037706.0843573584 1150623.428667349 1154933.0482775108 910324.3059938687 964743.2666256138 1077470.1308917808 0.9775789606120696 1.0109390378169665 1.1202872373918158 0.9572619679701642 0.9630949894624816 1.067893573731851 1.0718933315781263 0.8448719643303969 0.8953782002542685 1.0 20.039216445495544 -7.258596709093696 24.99851438562163 0.9025938107804418 1.02408938902491 0.4079389803494057 0.060706072158620755 232.0150562137041 2040368.174329136 0.03038595358913104 0.016530137378948824 5.5131942039727865e-08 7.258596709093696 0.12149557824446833 RIS(ph)DDDTATSDFCLWPSTLSK ddPTM_KYSE-520_SHP099_60min_R1 1 RISDDDTATSDFCLWPSTLSK 21 1 Q13950-2;Q13950 Q13950-2 RUNX2 Runt-related transcription factor 2 1 RIS(0.823)DDDT(0.059)AT(0.059)S(0.059)DFCLWPSTLSK 97.441 0.00093977 41929000.0 66911.0 74659.0 74327.0 72895.0 74624.0 75521.0 68916.0 99844.0 109620.0 71460.0 True False 63199.31344622845 71072.26957455637 79118.23734740476 79822.91888331914 80496.48424752093 75049.64542590737 75882.7018353446 99497.6644677648 89715.77129532212 70826.91999503867 0.892306392126828 1.0034640724110957 1.1170644911983592 1.1270138372374605 1.1365238563692959 1.0596203453597093 1.0713822066618186 1.4048001024855306 1.2666902824746098 1.0 16.112010185644895 -2.9596117389304064 0.47338852242639384 1.1898948965246976 1.2228094793038957e-15 0.37711371385679093 0.10802010705917911 16.071812568674076 1.069191103000769 0.06962505915420063 13.912254288158229 0.0010974588905091568 2.9596117389304064 -1.1898948965246963 RIS(ph)EMEEELK ddPTM_KYSE-520_SHP099_60min_R1 4 RISEMEEELK 10 1 O14974-5;O14974-4;O14974-3;O14974-2;O14974 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 RIS(1)EMEEELK;RIS(1)EMEEELK;RIS(1)EMEEELK;RIS(1)EMEEELK 153.39 4.4171999999999997e-05 1159350000.0 1596690.0 1505220.0 1393020.0 1438670.0 1543040.0 1551690.0 1366640.0 1574230.0 1724070.0 1475000.0 True False 1508118.422777397 1432906.9718187167 1482816.2981108064 1575400.7642480922 1664468.4693033716 1542005.3271398188 1504793.3083210755 1568769.3635580456 1411022.3482678914 1461932.647532637 1.031592272956425 0.9801456819759049 1.0142849608108935 1.0776151465711912 1.1385397761740683 1.0547717979636912 1.0293178080814982 1.0730790958158853 0.9651760295861311 1.0 20.47944541597092 -5.114436778568897 5.931602695417896 1.054473889202042 1.0039010462732914 0.12833622498984742 0.04567994064715685 0.3948200069638379 17.830570349520208 0.012746582617480079 0.022501788820355136 7.683572994040778e-06 5.114436778568897 -0.05057284292875064 RIS(ph)FSASHR ddPTM_KYSE-520_SHP099_60min_R1 7 RISFSASHR 9 1 E9PKY8;E9PJM0;Q03393 E9PKY8 PTS 6-pyruvoyl tetrahydrobiopterin synthase 1 RIS(0.991)FS(0.002)AS(0.007)HR;RIS(0.984)FS(0.015)ASHR;RIS(0.965)FS(0.035)ASHR;RIS(1)FSASHR;RIS(1)FSASHR;RIS(1)FSASHR;RIS(0.997)FS(0.003)ASHR 177.64 2.606e-05 11925170000.0 2686630.0 3954520.0 4655160.0 6833230.0 3016840.0 2879120.0 2990300.0 2765710.0 3539640.0 2953820.0 True False 2537597.2782358723 3764538.9233444612 4955239.06211935 7482658.124714482 3254248.1445284504 2861150.344124659 3292588.7065156223 2756116.39753157 2896930.603063075 2927651.452837184 0.8667689166948782 1.2858562516710281 1.6925645494163017 2.555856885717405 1.1115558654957924 0.9772851687491423 1.124651878667038 0.9414086485126569 0.9895066573774218 1.0 21.481312375270246 -5.971460301141609 24.999943571781728 1.0140803223935166 1.615560919802816 0.33758196115690164 0.39738444103273385 260.5120765618182 228199.83932926817 0.13205486352579082 0.14973382631573223 1.067922406864288e-06 5.971460301141609 0.6014805974092994 RIS(ph)GLIYEETR ddPTM_KYSE-520_SHP099_60min_R1 11 RISGLIYEETR 11 1 P62805 P62805 HIST1H4A Histone H4 1 RIS(0.999)GLIY(0.001)EETR;RIS(0.978)GLIY(0.021)EETR;RIS(1)GLIYEETR;RIS(1)GLIYEETR;RIS(1)GLIYEETR;RIS(1)GLIYEETR;RIS(1)GLIYEETR;RIS(1)GLIYEETR;RIS(1)GLIYEETR;RIS(1)GLIYEETR;RIS(1)GLIYEETR 205.98 5.3989e-08 24981890000.0 7161190.0 7313290.0 6725700.0 6210630.0 6001120.0 6173620.0 6057340.0 6006650.0 7252680.0 6273260.0 True False 6763944.515221664 6961948.570927911 7159249.383500485 6800886.407906008 6473374.002297957 6135088.147591939 6669675.041141475 5985814.333112649 5935776.137184426 6217683.796922421 1.0878559824109464 1.1197012904345314 1.1514334947435108 1.093797405920233 1.0411230634632942 0.986716010008202 1.0726944725691545 0.9627080643881342 0.9546603415443012 1.0 22.567945818970106 -5.856709087050299 2.0334989665724197 0.9969378948779295 1.120630940693931 0.7380514201851367 0.03325603195899979 0.1732530263225361 1.469226056060509 0.012240553063303683 0.014828608354104414 1.3908840054214779e-06 5.856709087050299 0.12369304581600149 RIS(ph)HEGS(ph)PVKPVAIR ddPTM_KYSE-520_SHP099_60min_R1 1 RISHEGSPVKPVAIR 15 2 Q96II8-3;Q96II8;Q96II8-2 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 2 RIS(1)HEGS(1)PVKPVAIR 44.586999999999996 0.06664400000000001 1169300000.0 539210.0 493590.0 432590.0 377900.0 390230.0 446050.0 393260.0 397790.0 444320.0 393410.0 True False 509298.94641151343 469877.1955063056 460475.4435684726 413815.5023802225 420938.88089502184 443266.0364961541 433014.5586477394 396410.1593348838 363642.6883957082 389924.6934683487 1.3061469430964743 1.205046008568439 1.1809342964985896 1.0612703152995184 1.0795389159655533 1.1367990894686315 1.1105081722219483 1.0166326113097568 0.9325972283548801 1.0 18.572835996231237 -1.0000000000017828 0.24137648975384685 0.9806025337284194 2.9087510526947864 0.7983984078000589 0.046737445820323915 24.22767166205866 0.32440980027586497 0.07011800900266485 18.754286678344346 0.0999999999995895 1.0000000000017828 1.928148518966367 RIS(ph)HMPSRPELSAVATDLR ddPTM_KYSE-520_SHP099_60min_R1 2 RISHMPSRPELSAVATDLR 19 2 E9PFH1;P61587 E9PFH1 RND3 Rho-related GTP-binding protein RhoE 1 RIS(1)HMPSRPELSAVATDLR;RIS(1)HMPSRPELSAVATDLR 86.08 0.00080565 304780000.0 138110.0 145085.0 142273.0 165123.0 173686.0 141268.0 148026.0 162343.0 157720.0 159609.0 True False 130448.76298454076 138114.898822975 151444.14522484847 180816.24027395964 187354.10006184233 140386.29401129624 162989.91267454188 161779.8700241409 129082.02379764826 158194.9884339231 0.8246074308417695 0.8730674731877779 0.9573258086371401 1.1429960080529686 1.184323864596373 0.8874256725897139 1.0303102158171185 1.0226611577630045 0.815967844971049 1.0 17.271344370859087 -4.8108079603209575 3.2242441240919084 1.0173307546206107 0.8404939054295559 0.286556542288365 0.10145127785068658 0.30356645194987025 6.3341034218668195 0.028498871308903433 0.0755673488845494 1.545937883142431e-05 4.8108079603209575 -0.1768368491910548 RIS(ph)HSLYSGIEGLDESPSR ddPTM_KYSE-520_SHP099_60min_R1 1 RISHSLYSGIEGLDESPSR 19 1 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10;F5GZI3;B1AP52 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 RIS(0.713)HS(0.285)LYS(0.002)GIEGLDESPSR 138.25 2.1754e-06 396160000.0 149700.0 195050.0 177890.0 190240.0 140290.0 141450.0 151100.0 162160.0 231490.0 147090.0 True False 141395.84258044852 185679.50522398113 189357.07403406335 208320.35240225814 151330.02485908952 140567.1580817868 166374.6625938908 161597.50480842838 189457.2513880145 145786.8970342884 0.9698803215984003 1.2736364447095005 1.2988620917662266 1.428937419206214 1.0380221263883365 0.9641961036369822 1.1412182163034874 1.1084501288920456 1.2995492409956089 1.0 17.153501534066468 -5.799613763972228 24.99999766876681 1.0934085567887288 1.2490326202557978 0.2257866837712832 0.13670219808752437 252.63892111884414 165449.15675467355 0.04373835205151266 0.04959559678693484 1.5863033304188717e-06 5.799613763972228 0.15562406346706892 RIS(ph)IGSLFR ddPTM_KYSE-520_SHP099_60min_R1 1 RISIGSLFR 9 1 Q9NV58-2;Q9NV58-3;Q9NV58;A0A0C4DGD6;A3KCU8;E7EQ63;E7EQV8;E7ETB2 Q9NV58-2 RNF19A;RNF19 E3 ubiquitin-protein ligase RNF19A 1 RIS(1)IGSLFR 196.02 2.1515e-06 148380000.0 30799.0 37050.0 35266.0 29784.0 37874.0 36662.0 35899.0 30640.0 44814.0 32072.0 True False 29090.518073715666 35270.06238681623 37539.302787595065 32614.66240511387 40854.46832641785 36433.178858921594 39528.02126047706 30533.71699142975 36676.90726900718 31787.86703163843 0.9151453302847248 1.10954479429878 1.1809317923166167 1.0260097782796351 1.2852220718601675 1.146134744513046 1.2434939790434778 0.9605462663172578 1.153802085320877 1.0 14.956188594323034 -4.268882955662287 4.331822235375992 1.1311907678006263 0.9005744342289784 0.28488828718630854 0.09847713632416129 0.2441946611518544 10.967385547745195 0.023863605861796908 0.17181470248111447 5.3841486822006753e-05 4.268882955662287 -0.2306163335716479 RIS(ph)IVENCFGAAGQPLTIPGR ddPTM_KYSE-520_SHP099_60min_R1 2 RISIVENCFGAAGQPLTIPGR 21 1 Q9H8W4 Q9H8W4 PLEKHF2 Pleckstrin homology domain-containing family F member 2 1 RIS(1)IVENCFGAAGQPLTIPGR;RIS(1)IVENCFGAAGQPLTIPGR 225.88 2.2147e-19 2550010000.0 804240.0 839890.0 757180.0 553870.0 718050.0 901400.0 719890.0 752560.0 898220.0 853580.0 True False 759627.2039873076 799540.423699408 805989.0343308342 606509.6382729128 774556.4498543687 895774.0282426482 792663.5066493452 749949.545008824 735125.8902835647 846017.9452751904 0.8978854505742406 0.9450631965487867 0.9526855060605887 0.7168992592416334 0.9155319389855532 1.0588120893242676 0.9369346254133057 0.8864463800054294 0.8689247011710194 1.0 19.690328739773697 -5.9976757178430615 24.996996625459012 0.9472821431843249 0.8792362765687772 0.1574109224751734 0.07848256037525259 162.48518770805887 1747442.597292862 0.025964630337609998 0.02926460693620735 1.0053662042180823e-06 5.9976757178430615 -0.06804586661554768 RIS(ph)LDQQ ddPTM_KYSE-520_SHP099_60min_R1 4 RISLDQQ 7 1 Q96PM5-8;Q96PM5-7;Q96PM5-6;Q96PM5-2;Q96PM5 Q96PM5-8 RCHY1 RING finger and CHY zinc finger domain-containing protein 1 1 RIS(1)LDQQ;RIS(1)LDQQ;RIS(1)LDQQ;RIS(1)LDQQ 68.893 0.031456 1780640000.0 2508760.0 2178900.0 2239720.0 1862760.0 2122930.0 2307840.0 2133940.0 2183350.0 2775820.0 2188610.0 True False 2369594.0817109267 2074222.373404424 2384095.9348787074 2039796.1503407825 2289992.5131806037 2293435.914510219 2349659.48044743 2175776.468447721 2271801.060727798 2169220.6181128155 1.0923711778898877 0.9562062779990361 1.0990564606346171 0.9403359590576683 1.0556752476255078 1.0572626386455188 1.0831814250832603 1.0030222146517347 1.0472890778182928 1.0 21.04874535745255 RIS(ph)LSDMPR ddPTM_KYSE-520_SHP099_60min_R1 9 RISLSDMPR 9 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 RIS(0.914)LS(0.086)DMPR;RIS(0.5)LS(0.5)DMPR;RIS(0.997)LS(0.003)DMPR;RIS(0.999)LS(0.001)DMPR;RIS(0.957)LS(0.043)DMPR;RIS(1)LSDMPR;RIS(0.998)LS(0.002)DMPR;RIS(0.999)LS(0.001)DMPR;RIS(1)LSDMPR 190.78 3.1117e-06 27271220000.0 3012620.0 2701183.0 3017510.0 3276200.0 3524420.0 4648960.0 4902480.0 5711010.0 6266660.0 5152690.0 True False 2845503.963090921 2571414.114121654 3212023.522786708 3587569.06297455 3801771.802793303 4619944.116195844 5398070.521994027 5691199.8392697545 5128792.513642982 5107041.175332159 0.5571727083061654 0.5035036973153856 0.6289402048100385 0.7024750613531555 0.7444176916286637 0.9046224531164789 1.0569859017521903 1.1143829947483441 1.0042590881028892 1.0 22.284056260097245 -6.060910530243358 0.957987821984987 1.067285979694519 0.5430118677627002 0.9476069918518032 0.04809984392123315 0.11346296196326495 0.22528520431978913 0.02711443041118961 0.030520124680409457 8.691394637667986e-07 6.060910530243358 -0.5242741119318189 RIS(ph)MEDLNK ddPTM_KYSE-520_SHP099_60min_R1 8 RISMEDLNK 9 1 Q00537;F5H6Z0;Q00537-2;F8VQZ9;F8VZY6 Q00537 CDK17 Cyclin-dependent kinase 17 1 RIS(1)MEDLNK;RIS(1)MEDLNK;RIS(1)MEDLNK;RIS(1)MEDLNK;RIS(1)MEDLNK;RIS(1)MEDLNK;RIS(1)MEDLNK;RIS(1)MEDLNK 179.83 1.7519e-05 5116960000.0 6210360.0 5800100.0 5253380.0 4932560.0 5370640.0 5508380.0 5206950.0 5204550.0 6079930.0 6307990.0 True False 5865858.950754274 5521454.489872402 5592021.280505187 5401349.019371755 5793278.813238436 5474000.157190187 5733319.320934864 5186496.630801101 4975967.974562739 6252106.116141956 0.9382212716462932 0.8831351207582471 0.8944220038216347 0.8639247189721109 0.9266123615978142 0.8755449852422015 0.9170220745505796 0.829559917003069 0.7958866791648931 1.0 22.575910834535158 -7.251386071280763 24.800028322678383 0.8595424720881628 0.8977033378273008 0.01731149271238841 0.054207903482108605 1445.9019335433923 3566836.729331466 0.02428537031933698 0.013799989521473042 5.6054944733447076e-08 7.251386071280763 0.03816086573913802 RIS(ph)MEDLNKR ddPTM_KYSE-520_SHP099_60min_R1 4 RISMEDLNKR 10 2 Q00537;F5H6Z0;Q00537-2;F8VQZ9;F8VZY6 Q00537 CDK17 Cyclin-dependent kinase 17 1 RIS(1)MEDLNKR;RIS(1)MEDLNKR;RIS(1)MEDLNKR;RIS(1)MEDLNKR 164.2 4.0239e-05 6300710000.0 4938910.0 4206900.0 3030270.0 2796400.0 3425910.0 3319170.0 3374430.0 3064070.0 3658830.0 3570850.0 True False 4664938.816827004 4004794.209314364 3225606.0528034274 3062169.0152316806 3695509.626238537 3298453.8288464025 3715550.315663151 3053441.4563293136 2994478.7035984634 3539215.047079259 1.3180715934954983 1.131548706716571 0.911390240461755 0.8652113461595782 1.044160803195121 0.9319732723131517 1.0498232704818016 0.862745387243188 0.8460855482827075 1.0 21.754997993683844 -4.5099304953202966 2.7456733419285855 0.9388467579813541 1.31626941165819 0.7478024796714831 0.07029458670639588 0.14907513442671957 2.0245729680118596 0.01910296147637105 0.09763366067915626 3.09079004433031e-05 4.5099304953202966 0.3774226536768358 RIS(ph)QSQPVR ddPTM_KYSE-520_SHP099_60min_R1 11 RISQSQPVR 9 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 RIS(0.5)QS(0.5)QPVR;RIS(0.5)QS(0.5)QPVR;RIS(0.5)QS(0.5)QPVR;RIS(0.909)QS(0.091)QPVR;RIS(0.95)QS(0.05)QPVR;RIS(0.965)QS(0.035)QPVR;RIS(0.926)QS(0.074)QPVR;RIS(0.883)QS(0.117)QPVR;RIS(1)QSQPVR;RIS(0.86)QS(0.14)QPVR;RIS(0.713)QS(0.287)QPVR 172.74 4.5189e-05 52766150000.0 22710690.0 22721260.0 22950170.0 20721680.0 21367860.0 21522940.0 23286600.0 23249760.0 26939740.0 22289200.0 True False 21450882.75306188 21629696.564293448 24429574.67977032 22691062.23699975 23049389.015507523 21388607.347930796 25640636.783314984 23169112.00909475 22048162.311580393 22091735.02873519 0.9709913107847916 0.9790854605199293 1.1058241757831266 1.0271290239306692 1.0433489712567479 0.9681723649188341 1.160643867489976 1.0487683280176134 0.9980276462170978 1.0 24.39700339295702 -4.630243184990287 9.903568370071179 1.0465274754696137 0.9730757677920633 0.21554501542047233 0.052528950494956136 0.40439937286561883 33.842283202162925 0.013183991498717677 0.034961486332953984 2.342916522151253e-05 4.630243184990287 -0.07345170767755038 RIS(ph)SADPDKLQTEPLST(ph)SFEISR ddPTM_KYSE-520_SHP099_60min_R1 1 RISSADPDKLQTEPLSTSFEISR 23 2 Q96Q89-3;Q96Q89;Q96Q89-2;Q96Q89-5;Q96Q89-4 Q96Q89-3 KIF20B Kinesin-like protein KIF20B 2 RIS(0.977)S(0.023)ADPDKLQTEPLS(0.061)T(0.697)S(0.242)FEIS(0.001)R 171.12 5.8102e-10 850940000.0 256360.0 282620.0 316770.0 258520.0 278430.0 305480.0 223710.0 265760.0 331970.0 276960.0 True False 242139.1997590096 269042.51097873127 337189.50104992057 283089.663073128 300340.85695000587 303573.38600794756 246324.78999920108 264838.1405888503 271692.61628268677 274506.34987161926 0.882089612397866 0.9800957650143857 1.2283486382286488 1.0312681772407923 1.0941126028249213 1.1058883925633134 0.8973373115572806 0.9647796515917006 0.9897498415237083 1.0 18.066479996426263 -6.75582538044333 24.99830668685436 0.960031671175716 1.0590561239147702 0.20256037875620891 0.0876584363709023 220.9098241650899 983684.477923423 0.03572773898302977 0.026886826178875153 1.7545858375690785e-07 6.75582538044333 0.09902445273905425 RIS(ph)SSSVQPCSEEVSTPQDSLAQCK ddPTM_KYSE-520_SHP099_60min_R1 5 RISSSSVQPCSEEVSTPQDSLAQCK 25 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 RIS(0.689)S(0.237)S(0.059)S(0.015)VQPCSEEVSTPQDSLAQCK;RIS(0.594)S(0.134)S(0.134)S(0.134)VQPCS(0.003)EEVSTPQDSLAQCK;RIS(0.688)S(0.279)S(0.027)S(0.006)VQPCSEEVSTPQDSLAQCK;RIS(0.797)S(0.182)S(0.017)S(0.004)VQPCSEEVSTPQDSLAQCK;RIS(0.955)S(0.042)S(0.003)S(0.001)VQPCSEEVSTPQDSLAQCK 270.82 3.7163e-38 16504390000.0 4238540.0 4240780.0 3026750.0 2414610.0 2562930.0 3926930.0 3137550.0 3790070.0 4527770.0 4081030.0 True False 4003419.736879984 4037046.5632594433 3221859.1479712287 2644093.80842103 2764618.0099230665 3902420.573249277 3454724.1735371393 3776923.1317789853 3705641.1037932965 4044875.249193297 0.9897511023803316 0.9980645420559225 0.7965286812278799 0.6536898286166832 0.6834865946667792 0.9647814414122091 0.8540990662755653 0.9337551590824089 0.9161323589725897 1.0 21.947663777505866 -7.410032758008647 1.0737204844698198 0.9780858337073625 0.8352814201815685 0.16044943878279683 0.11193139906420986 1.0763779811111225 2.2130328761534113 0.11497685747865545 0.04262447212510363 3.890158011639394e-08 7.410032758008647 -0.14280441352579398 RIS(ph)TSDILSEK ddPTM_KYSE-520_SHP099_60min_R1 10 RISTSDILSEK 11 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 RIS(0.995)T(0.004)S(0.001)DILSEK;RIS(0.97)T(0.027)S(0.003)DILSEK;RIS(0.549)T(0.411)S(0.038)DILS(0.001)EK;RIS(0.487)T(0.487)S(0.026)DILSEK;RIS(0.992)T(0.008)SDILSEK;RIS(0.992)T(0.007)S(0.001)DILSEK;RIS(0.976)T(0.019)S(0.005)DILSEK;RIS(0.95)T(0.025)S(0.025)DILSEK;RIS(0.48)T(0.48)S(0.039)DILSEK;RIS(0.986)T(0.007)S(0.007)DILSEK 236.22 4.1160000000000005e-14 13630450000.0 7872160.0 8503550.0 8323450.0 9167190.0 9303940.0 11591960.0 13153740.0 16830860.0 18005920.0 14743390.0 True False 7435475.592038099 8095026.69391122 8859992.90499087 10038436.98138383 10036107.145822786 11519610.277820764 14483448.407331338 16772477.675012238 14736498.820305286 14612775.034783853 0.5088339192479796 0.5539691588108376 0.6063182991526787 0.6869630824732884 0.6868036442040002 0.7883246166727261 0.9911497558030785 1.1477955169423664 1.0084668233943876 1.0 23.800726842952017 -6.453097761361954 1.073910501214952 1.0765899145655728 0.5709628321238562 0.9251816473566856 0.057989609013834834 0.1277496079722352 0.3041228283583436 0.03641987242513711 0.02747032965948916 3.522915599280834e-07 6.453097761361954 -0.5056270824417166 RIS(ph)YVQDENRDPIR ddPTM_KYSE-520_SHP099_60min_R1 4 RISYVQDENRDPIR 14 2 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 RIS(1)YVQDENRDPIR;RIS(0.998)Y(0.002)VQDENRDPIR;RIS(0.998)Y(0.002)VQDENRDPIR;RIS(0.99)Y(0.01)VQDENRDPIR 99.09200000000001 0.0011048 6386150000.0 2294170.0 2176100.0 2152390.0 2050590.0 2022480.0 2165400.0 2266980.0 2490390.0 2795030.0 2327530.0 True False 2166907.816785487 2071556.8896073082 2291136.503345764 2245477.457067636 2181637.6696629217 2151884.935385656 2496148.46199271 2481751.418351395 2287523.0089724883 2306909.894990939 0.9393118567355219 0.8979791079423345 0.9931625454121877 0.9733702482022842 0.9456969578222258 0.9327997335561768 1.0820311913407064 1.0757903565024773 0.9915961667768012 1.0 21.13753022458547 -6.752873536682408 24.99984019542947 1.0436702942764273 0.9480531808922986 0.6059304170198325 0.035524537818537504 123.50649896729334 360460.99419273325 0.014081111997549542 0.010727727146406027 1.766552152623566e-07 6.752873536682408 -0.0956171133841287 RIS(ph)YVQDENRDPIRR ddPTM_KYSE-520_SHP099_60min_R1 7 RISYVQDENRDPIRR 15 3 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 RIS(1)YVQDENRDPIRR;RIS(1)YVQDENRDPIRR;RIS(1)YVQDENRDPIRR;RIS(1)YVQDENRDPIRR;RIS(1)YVQDENRDPIRR;RIS(1)YVQDENRDPIRR;RIS(1)YVQDENRDPIRR 183.06 4.4322e-10 11389900000.0 2528850.0 2510790.0 2640780.0 2316250.0 2081890.0 2238480.0 2131060.0 2320010.0 2929300.0 2061600.0 True False 2388569.6493625045 2390167.8796273735 2811008.9041973953 2536385.7035940434 2245722.8986662636 2224508.815998002 2346488.3419413427 2311962.4268044033 2397412.9616437457 2043335.8279005291 1.1689559869444923 1.1697381541453247 1.3756959897706238 1.2412965450716484 1.099047385164132 1.0886653019164367 1.1483615712608017 1.1314647329312875 1.1732838669534909 1.0 20.962494903806608 -5.7565166762201425 24.675284935359908 1.11454800310156 1.2437496188182218 0.4664597625623512 0.06884657778532065 100.46236388588288 503568.113069525 0.021080512302080908 0.026335388327907966 1.751795166757693e-06 5.7565166762201425 0.12920161571666178 RISQS(ph)QPVR ddPTM_KYSE-520_SHP099_60min_R1 1 RISQSQPVR 9 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 RIS(0.184)QS(0.816)QPVR 81.565 0.016577 790770000.0 656000.0 728260.0 745010.0 599710.0 701550.0 695340.0 753370.0 687450.0 916120.0 661950.0 True False 619610.372296421 693273.2964594545 793034.5366581456 656706.2580906139 756757.9937265266 691000.1251367237 829527.9917826562 685065.396402037 749775.701505844 656085.6379893076 0.9444047185598031 1.056681104290158 1.2087363154123332 1.000945943738699 1.1534439254694668 1.053216356411059 1.2643593210253676 1.0441706947000746 1.1428015766412238 1.0 19.323524614644132 -4.36953504030179 3.660432266524283 1.1123779270240048 0.9417165286010841 0.2610004559268724 0.08290491066501854 0.2947190158265448 6.3582415732823 0.019449748542486548 0.10906906434542644 4.27036463349677e-05 4.36953504030179 -0.17066139842292072 RIST(ph)SDILSEK ddPTM_KYSE-520_SHP099_60min_R1 1 RISTSDILSEK 11 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 RIS(0.056)T(0.888)S(0.056)DILSEK 293.96 1.9391e-28 1455000000.0 954170.0 983620.0 1247300.0 1323400.0 1424700.0 1632100.0 1789800.0 2437600.0 2601000.0 1940200.0 True False 901240.2880092617 936365.4187562807 1327702.9537505615 1449175.5381052825 1536815.7845658634 1621913.458503246 1970730.4507646968 2429144.5345401145 2128723.96587423 1923011.3374527588 0.4686609332231261 0.486926624154281 0.6904290827059038 0.7535969808814937 0.7991714633370524 0.8434237629881318 1.0248147852186598 1.2631982387362235 1.1069742150839113 1.0 20.874935837690312 -5.837652740861 0.5963743640032478 1.151233463945947 0.43586037638925423 0.8716312258474384 0.08805813335712034 0.3292976163537568 0.24832284402007407 0.06911423623509706 0.1245481598200481 1.4532731812409664e-06 5.837652740861 -0.7153730875566927 down RIT(ph)SPLMEPSSIEK ddPTM_KYSE-520_SHP099_60min_R1 1 RITSPLMEPSSIEK 14 1 P28066 P28066 PSMA5 Proteasome subunit alpha type-5 1 RIT(0.575)S(0.425)PLMEPSSIEK 90.97200000000001 0.0043894 630760000.0 420140.0 478390.0 407770.0 338470.0 315690.0 370090.0 326770.0 288780.0 514300.0 354480.0 True False 396833.99667167454 455407.42632197036 434055.5066550682 370638.0870352839 340533.0069696059 367780.13103208476 359803.10056787316 287778.289581759 420916.08444794896 351339.58298126666 1.1294884376658283 1.2962030137841103 1.2354301299384531 1.054928351341062 0.9692417918870333 1.046793896410171 1.0240892799917103 0.8190887207750323 1.198032060254344 1.0 18.42250659854557 -5.348126958280079 3.76702322624172 1.0038234979571066 1.228939678646793 0.4955370791330648 0.09497551921708802 0.17806487039067218 4.730341675960764 0.02622503690445641 0.04099875857320075 4.486142263592983e-06 5.348126958280079 0.22511618068968642 RITEAEKNER ddPTM_KYSE-520_SHP099_60min_R1 2 RITEAEKNER 10 2 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ; 115.0 0.00040004 904990000.0 909240.0 961700.0 723090.0 479790.0 762770.0 690320.0 448360.0 492590.0 916860.0 614980.0 False True 858802.6446749956 915498.4884588714 769701.538384907 525389.0973458762 822795.6594323749 686011.4568187976 493684.6043719175 490881.3202613708 750381.336159725 609531.7556471996 1.4089547209285604 1.5019701270310304 1.2627751241075855 0.8619552508597671 1.3498815308789485 1.125472873993894 0.8099407451671229 0.805341667129638 1.2310783305505906 1.0 19.21734185938616 -4.883373771738697 0.7922971626356059 0.9899499370149414 1.5874835460432657 0.4573997782198773 0.17871837617650232 1.1493378513303942 0.9808736092283998 0.07988881261334091 0.5222999797666118 1.3080556717726926e-05 4.883373771738697 0.5975336090283243 RIVS(ph)DGEDEDDSFKDTSSINPFNTSLFQFSSVK ddPTM_KYSE-520_SHP099_60min_R1 1 RIVSDGEDEDDSFKDTSSINPFNTSLFQFSSVK 33 2 Q2NKX8;B5MDQ0 Q2NKX8 ERCC6L DNA excision repair protein ERCC-6-like 1 RIVS(0.998)DGEDEDDS(0.002)FKDTSSINPFNTSLFQFSSVK 170.6 1.9844999999999997e-10 223810000.0 123480.0 163370.0 167850.0 128730.0 120960.0 109790.0 108890.0 81559.0 178250.0 97178.0 True False 116630.31824872263 155521.45997663046 178669.87956949574 140964.46049591427 130478.86383174473 109104.75988546743 119897.66386398896 81276.09086501374 145884.29331683237 96317.07852333992 1.2108996663604195 1.6146820725977886 1.8550176387067199 1.4635458493662183 1.354680455762854 1.1327664995468976 1.244822472838344 0.8438388301542868 1.514625397213238 1.0 16.555504012678934 -5.9550549101601895 2.121237130364126 1.1414529913024904 1.571476132266418 0.41294756277876554 0.21865224936315086 0.3001054277433079 2.736035228522918 0.0771059147306117 0.08703894294936075 1.1090345852589935e-06 5.9550549101601895 0.43002314096392746 RKAEDS(ph)DS(ph)EPEPEDNVR ddPTM_KYSE-520_SHP099_60min_R1 5 RKAEDSDSEPEPEDNVR 17 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 2 RKAEDS(1)DS(1)EPEPEDNVR;RKAEDS(1)DS(1)EPEPEDNVR;RKAEDS(1)DS(1)EPEPEDNVR;RKAEDS(1)DS(1)EPEPEDNVR;RKAEDS(1)DS(1)EPEPEDNVR 114.39 0.00010908 3208200000.0 3428810.0 3277330.0 3460790.0 2703730.0 2776460.0 2834480.0 2523820.0 2515580.0 3829670.0 2848180.0 True False 3238607.074136726 3119882.1474273796 3683878.060859786 2960691.6862939377 2994951.606103558 2816788.9589230292 2778952.355709551 2506854.0401207884 3134298.466124398 2822947.3410505126 1.1472431763220678 1.105186094709924 1.304975834047578 1.0487945145984077 1.0609307380806603 0.9978184566045813 0.9844152298906894 0.8880272060575897 1.1102929270221602 1.0 21.428770786488027 -5.461153502716663 6.687694006991702 1.0043062924183601 1.178733941551382 0.5576533525649673 0.07127626851344285 0.18204595697608436 16.245314937232546 0.020261227471968714 0.02992971546823587 3.4581712609838746e-06 5.461153502716663 0.1744276491330219 RKAENPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RKAENPSPR 9 2 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 RKAENPS(1)PR;RKAENPS(1)PR 56.225 0.036003 503660000.0 1084380.0 1045850.0 743560.0 686620.0 1019390.0 1101570.0 780110.0 823570.0 1008150.0 1123080.0 True False 1024227.2797420621 995605.7961471446 791491.0673380648 751876.1583601692 1099610.1934643048 1094694.6930233552 858971.1319399067 820713.2278926827 825095.3733933503 1113130.3849430194 0.9201323525046815 0.8944197459834045 0.7110497368900597 0.6754609958820389 0.9878539013384252 0.9834379762074252 0.771671624060354 0.7373019719829987 0.7412387484468735 1.0 20.08619115993174 -9.973340089371286 4.176046258155344 1.0000085276315775 0.8243793271626667 0.18931149197134844 0.10880766587967358 38380511.20977951 96061434.09840983 5336.102810693111 0.029595771975464768 1.0633100302830893e-10 9.973340089371286 -0.17562920046891084 RKAS(ph)ELR ddPTM_KYSE-520_SHP099_60min_R1 2 RKASELR 7 2 P35269;M0QXD6;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 1 RKAS(1)ELR;RKAS(1)ELR 69.27600000000001 0.022122 2582600000.0 2657600.0 3008800.0 2257300.0 2406100.0 3527000.0 3483000.0 3367000.0 3691300.0 4297600.0 4322600.0 True False 2510177.6302057435 2864252.731699126 2402809.1698077014 2634775.0205796594 3804554.8341151145 3461261.305046749 3707369.218753344 3678495.741855897 3517264.17367977 4284305.126931917 0.5859007600617222 0.6685454576271692 0.5608398791914255 0.6149830468462638 0.8880214460447727 0.8078932761554807 0.8653373438432642 0.8585979833070729 0.8209649101716895 1.0 22.030629801381416 -5.757080779233596 24.99329415112589 0.8627136874320351 0.608585140883886 0.846302895880971 0.0553989576100654 39.67998296582546 227533.30451917934 0.015571679272655795 0.01940108459590943 1.7495212455546232e-06 5.757080779233596 -0.2541285465481491 RKAS(ph)PEPEGEAAGK ddPTM_KYSE-520_SHP099_60min_R1 8 RKASPEPEGEAAGK 14 2 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK;RKAS(1)PEPEGEAAGK 137.89 5.0582e-06 15108750000.0 12502310.0 12346720.0 11745870.0 9974270.0 10499310.0 10939830.0 9990890.0 9452280.0 13879040.0 10563480.0 True False 11808781.941562917 11753565.038395453 12503027.574256476 10922221.621926384 11325545.964097854 10871550.463046098 11000866.662889991 9419492.246858748 11358956.198126506 10469895.785463084 1.1278796067826014 1.1226057335465247 1.194188350147314 1.0432025156440747 1.0817248037772063 1.0383628152383992 1.0507140556417127 0.8996739260707095 1.0849158798598395 1.0 23.319743746351904 -5.926643230453984 0.8788473582345739 0.998509736583782 1.1462382080874451 0.5133949163406696 0.05293280138538778 0.46277292667735287 0.7844819957079887 0.02792173364700808 0.03748007596636161 1.1840138144775997e-06 5.926643230453984 0.1477284715036632 RKAS(ph)PEPPDSAEGALK ddPTM_KYSE-520_SHP099_60min_R1 7 RKASPEPPDSAEGALK 16 2 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RKAS(0.965)PEPPDS(0.035)AEGALK;RKAS(1)PEPPDSAEGALK;RKAS(0.953)PEPPDS(0.047)AEGALK;RKAS(0.998)PEPPDS(0.002)AEGALK;RKAS(0.971)PEPPDS(0.029)AEGALK;RKAS(0.98)PEPPDS(0.02)AEGALK;RKAS(0.575)PEPPDS(0.425)AEGALK 180.86 4.228399999999999e-09 11580180000.0 8546550.0 8047460.0 7994990.0 6609390.0 7065600.0 7272880.0 6706540.0 6861630.0 9192760.0 6731070.0 True False 8072455.834374972 7660847.9421162745 8510359.847836297 7237544.43841444 7621622.522235254 7227487.258182148 7384502.512722911 6837828.607046486 7523586.514621283 6671437.956493225 1.2100023843462644 1.1483053566675336 1.2756410092299926 1.0848552419452886 1.1424257516802996 1.0833477438170174 1.1068831878344412 1.0249407476526577 1.127730867570862 1.0 22.66956632160572 -5.25018409494236 0.2260837608676974 0.9957525849849904 1.325080424197957 0.5817390785019161 0.05004275762144038 5.142772213076584 0.3554232163560953 0.09540815624287305 0.4804337933682782 5.6210300244022455e-06 5.25018409494236 0.3293278392129666 RKCS(ph)QTQCPR ddPTM_KYSE-520_SHP099_60min_R1 3 RKCSQTQCPR 10 2 P29590-12;P29590-13;P29590-11;H3BT57;H3BUJ5;H3BRN3;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4;H3BVD2 P29590-12;P29590-2 PML Protein PML 1 RKCS(0.97)QT(0.03)QCPR;RKCS(0.998)QT(0.002)QCPR;RKCS(0.999)QT(0.001)QCPR 61.65 0.021644999999999998 988670000.0 188729.0 182889.0 171626.0 179418.0 154014.0 218697.0 218663.0 267657.0 323952.0 241806.0 True False 178259.82614806583 174102.73791801414 182689.28657130935 196469.83277601146 166134.02558021108 217332.0309014666 240767.5899852278 266728.5603386133 265130.48296535504 239663.78696222123 0.7437912435897767 0.7264457435342886 0.7622732198590648 0.8197727127084972 0.6931961965801666 0.9068204823773613 1.0046056312344782 1.1129280886338424 1.1062600917974654 1.0 17.870652409636353 -6.629640646404974 2.0684490737251955 1.0780442909089814 0.7518489126203184 0.9091871818034051 0.04570525316070235 0.0842743183116034 0.7347373458140383 0.020787380316467187 0.01476839198881278 2.3461693319628862e-07 6.629640646404974 -0.32619537828866296 RKDDEDSFR ddPTM_KYSE-520_SHP099_60min_R1 1 RKDDEDSFR 9 2 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 0 167.1 6.8297e-05 2040600000.0 417500.0 433220.0 437920.0 323600.0 493070.0 509120.0 300840.0 461490.0 524170.0 432680.0 False True 394340.4427343835 412407.46092352236 466149.0238967738 354354.84670611244 531871.8038154631 505942.3932315252 331251.8431154601 459889.198902576 428993.941250401 428846.791819946 0.9195368841652657 0.9616661912599178 1.0869826539182537 0.8262970680095247 1.2402373387435128 1.1797742291236453 0.77242467341236 1.0723857743015677 1.0003431282063007 1.0 18.710102802442435 -4.537014502928759 20.091660952041508 1.0225035662379909 0.930068916425147 0.0595514412328203 0.134511228869791 59.595940957455525 84707.76098727634 0.034473846333953215 0.09148432834473545 2.9039256784902994e-05 4.537014502928759 -0.09243464981284388 RKDDEDSFRR ddPTM_KYSE-520_SHP099_60min_R1 4 RKDDEDSFRR 10 3 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 0 ;;; 145.28 0.00043606 3361500000.0 2457650.0 2649970.0 2794330.0 2156940.0 2836980.0 2480030.0 2142060.0 2145740.0 2909120.0 1835840.0 False True 2321319.25529619 2522661.463513938 2974456.982886081 2361934.9290923444 3060234.185791861 2464551.2128495807 2358600.329290995 2138296.92875948 2380897.140947341 1819575.8858619072 1.2757474273718536 1.3864007998319834 1.6346979568137787 1.2980689332303001 1.6818392734097327 1.3544646486025274 1.296236308481171 1.1751622701608837 1.3084901594085172 1.0 20.795170789711594 -7.646772351930908 0.7083512386565846 1.0272440500526034 1.454224306182144 0.48420119778026804 0.13581549174050334 0.5519829944147435 0.6038650815287315 0.13000445481431622 0.0559751739974356 2.255421146867541e-08 7.646772351930908 0.4269802561295406 RKDDSYFDR ddPTM_KYSE-520_SHP099_60min_R1 5 RKDDSYFDR 9 2 Q9HCD5;Q5JY17 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 0 ;;;; 183.78 4.468e-06 9861370000.0 3151780.0 3508000.0 2617850.0 2521150.0 3277350.0 3074980.0 2722080.0 2838890.0 3141850.0 2220030.0 False True 2976944.480482337 3339470.414384652 2786600.799708097 2760759.3379886094 3535258.799429305 3055787.909214086 2997254.4113406837 2829042.553191909 2571369.2395932116 2200362.2613572027 1.3529338022031572 1.517691187961403 1.2664281916875346 1.2546840065716038 1.6066712565996866 1.388765824100823 1.3621640690619512 1.2857167216851515 1.1686117712304194 1.0 21.06930963381902 -7.854330353601916 1.2774268036816636 1.0026433735934825 1.3989598844460376 0.6248002563848557 0.09923867452227725 0.28319154250492856 1.001068337513723 0.09641821140085778 0.03027818596146536 1.3985231071002287e-08 7.854330353601916 0.39631651085255504 RKDEIER ddPTM_KYSE-520_SHP099_60min_R1 1 RKDEIER 7 2 Q9NWB6;Q9NWB6-2;Q9NWB6-3 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 0 89.698 0.0095127 0.0 202710.0 191050.0 156290.0 135390.0 209550.0 185760.0 140010.0 184950.0 202480.0 130090.0 False True 191465.27220763353 181871.67122810378 166364.70347284176 148257.4248935121 226040.39282359584 184600.60293582655 154163.57716592072 184308.45161765438 165714.73610542648 128937.50380848844 1.4849463232359292 1.410541276634599 1.2902739587695458 1.1498394223120656 1.7531004257639022 1.4317060396175716 1.195645740085838 1.4294402029948454 1.2852330098740197 1.0 16.976312433162143 -8.683562336686895 0.7354814948470276 0.9922969153449005 1.3996757584716386 0.3603355383079342 0.15815312095688774 2.965884074528996 2.259490369572598 0.21262935605884442 0.05897378622035491 2.072228599813013e-09 8.683562336686895 0.4073788431267381 RKDPELWGSVLLESNPYR ddPTM_KYSE-520_SHP099_60min_R1 1 RKDPELWGSVLLESNPYR 18 2 A0A087WVQ6;Q00610-2;Q00610 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 170.5 1.1062e-08 372400000.0 343360.0 341010.0 284710.0 216430.0 324110.0 274270.0 206070.0 201720.0 282210.0 153340.0 False True 324313.1363288095 324627.36773355457 303062.8621521065 236999.44212794746 349615.61306635954 272558.17919470917 226901.5666493911 201020.2804018021 230967.77793516585 151981.5268967148 2.1338983950938304 2.135965958245493 1.9940769667228382 1.5593963751200504 2.300382291223821 1.7933638696756689 1.4929549089448961 1.322662592661104 1.5197095505701121 1.0 17.213536451565346 -7.179423206762423 0.4552382540536743 0.9981256709834736 2.1294780790014256 0.7291840023460037 0.20522139179633772 0.5275849627067424 0.26673099659238136 0.22850783341031647 0.17952710943795672 6.615715081772348e-08 7.179423206762423 1.131352408017952 RKDPFS(ph)PDK ddPTM_KYSE-520_SHP099_60min_R1 2 RKDPFSPDK 9 2 H0YHD0;Q5PSV4-2;Q5PSV4 H0YHD0 BRMS1L Breast cancer metastasis-suppressor 1-like protein 1 RKDPFS(1)PDK;RKDPFS(1)PDK 75.819 0.012281 1231970000.0 1397520.0 1128180.0 1177450.0 1084960.0 1360830.0 1250620.0 1020820.0 1109670.0 1466960.0 1220970.0 True False 1319996.7797129478 1073980.539367295 1253350.3109866097 1188074.2721948826 1467919.5789364523 1242814.416686066 1124014.4478431202 1105820.813768925 1200597.0430522326 1210153.1557002869 1.0907683655537774 0.8874748905197939 1.0356956101654138 0.9817552981608946 1.2130031409842519 1.026989361496875 0.9288199948482386 0.9137858365778608 0.9921033857549011 1.0 20.20675821433368 -6.7035788930836615 7.118632881731128 0.9516272872642758 1.0379541280898172 0.19123358514364486 0.08077469620857114 0.3720100498815381 37.248427949458254 0.03228507900916024 0.024768961795169655 1.9788875077614783e-07 6.7035788930836615 0.08632684082554143 RKDREDS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 7 RKDREDSPER 10 3 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 1 RKDREDS(1)PER;RKDREDS(1)PER;RKDREDS(1)PER;RKDREDS(1)PER;RKDREDS(1)PER;RKDREDS(1)PER;RKDREDS(1)PER 164.81 8.0875e-05 2745705000.0 1472980.0 1403302.0 809435.0 683000.0 1424989.0 1307813.0 825048.0 882341.0 1068062.0 830050.0 True False 1391270.8630871673 1335885.2655207552 861612.4752417903 747912.1146485627 1537127.5272216771 1299650.4539583984 908451.9035325237 879280.3650109376 874128.8644519657 822696.4027691284 1.6911109109074307 1.6237888740296849 1.0473030784402042 0.9090985594821517 1.8684019062777377 1.57974490903799 1.1042371164803313 1.0687786673812505 1.062516940039752 1.0 19.650000609790805 -6.846045068522485 6.635851957935615 1.0585657411693727 1.4360272517151105 0.33453954867602875 0.2722463755603297 0.30949750854315433 19.878810181364653 0.1261555584862864 0.0849244818968516 1.4254596601217172e-07 6.846045068522485 0.37746151054573773 RKDS(ph)AQDDQAK ddPTM_KYSE-520_SHP099_60min_R1 3 RKDSAQDDQAK 11 2 Q13045-2;Q13045-3;Q13045;J3KS54 Q13045-2 FLII Protein flightless-1 homolog 1 RKDS(1)AQDDQAK;RKDS(1)AQDDQAK;RKDS(1)AQDDQAK 161.24 2.9828000000000003e-05 399170000.0 546270.0 823550.0 343272.0 281654.0 579980.0 608010.0 855840.0 276328.0 427248.0 2886330.0 True False 515967.3141377523 783985.4218262486 365399.86237461993 308422.3114776374 625621.1263652062 604215.1840601413 942356.6593934838 275369.48266343976 349670.5332456101 2860759.3617307595 0.1803602641452485 0.27404801407411544 0.12772827636699685 0.10781134394017744 0.21869058080673567 0.21120797231074728 0.32940787400704613 0.09625747846782932 0.12222997079840346 1.0 21.447966717024205 -10.499094971451171 3.057315649402237 1.0238816491437313 0.1873052006921621 0.9203197534744951 0.07191332404657759 25622995.234348126 30288259.28294445 5146897.091863889 0.019410872764452435 3.168874418293533e-11 10.499094971451171 -0.8365764484515692 RKDSEEEAAS(ph)PEGK ddPTM_KYSE-520_SHP099_60min_R1 3 RKDSEEEAASPEGK 14 2 A0A3B3ITU7;Q9HB96 A0A3B3ITU7 FANCE Fanconi anemia group E protein 1 RKDS(0.001)EEEAAS(0.999)PEGK;RKDS(0.028)EEEAAS(0.972)PEGK;RKDS(0.004)EEEAAS(0.996)PEGK 149.34 2.2833000000000002e-06 1289680000.0 1042830.0 890180.0 914720.0 870200.0 943940.0 900740.0 876860.0 845970.0 1032040.0 813980.0 True False 984982.1410699348 847414.4166125788 973684.3148037462 952903.5463648299 1018222.7077160813 895118.1475474621 965501.5661289135 843035.5275208822 844647.5516112407 806768.770466857 1.2208977059188226 1.050380787697324 1.2068939086974069 1.181135885829354 1.2620998047889993 1.10951015993031 1.196751289183147 1.0449530997996346 1.0469512238586829 1.0 19.62179571361252 -7.301870010465679 6.428051838221751 1.0329406765545073 1.172816739386842 0.5749733810188196 0.05700170760266846 0.1664023435421811 19.54855513345601 0.030845473071689524 0.014853882247389576 4.9903383190492396e-08 7.301870010465679 0.13987606283233478 RKDT(ph)TSDKDDSLGSQQTNEQCAQK ddPTM_KYSE-520_SHP099_60min_R1 3 RKDTTSDKDDSLGSQQTNEQCAQK 24 3 P23497;P23497-3;P23497-4;P23497-2;E9PHV6;P23497-7;P23497-6;P23497-5 P23497 SP100 Nuclear autoantigen Sp-100 1 RKDT(0.333)T(0.333)S(0.333)DKDDS(0.001)LGS(0.001)QQT(0.001)NEQCAQK;RKDT(0.329)T(0.329)S(0.329)DKDDS(0.012)LGSQQTNEQCAQK;RKDT(0.333)T(0.333)S(0.333)DKDDSLGSQQTNEQCAQK 124.97 8.2464e-05 3762050000.0 785060.0 755920.0 711290.0 667870.0 662850.0 710640.0 590280.0 634120.0 908590.0 603380.0 True False 741511.1568216891 719604.4685409483 757140.8915042395 731344.1639975632 715012.5238994061 706204.6321614769 649951.2629776429 631920.3857247202 743612.9596899904 598034.5226225364 1.2399136316913117 1.2032824884177191 1.2660488029754209 1.2229129529018317 1.1956040944992454 1.1808760288027964 1.086812279878824 1.0566620518052796 1.2434281493132784 1.0 19.189869243440032 -6.4574926602609795 1.8254077043575747 1.1011973439812923 1.230369396484502 0.5021077824400837 0.06022579937463629 0.3037880056747471 2.0204830640321094 0.026128873678276727 0.020734890931381186 3.4874447799740234e-07 6.4574926602609795 0.12917205250320962 RKDTTSDKDDS(ph)LGSQQTNEQCAQK ddPTM_KYSE-520_SHP099_60min_R1 3 RKDTTSDKDDSLGSQQTNEQCAQK 24 3 P23497;P23497-3;P23497-4;P23497-2;E9PHV6;P23497-7;P23497-6;P23497-5 P23497 SP100 Nuclear autoantigen Sp-100 1 RKDT(0.012)T(0.012)S(0.012)DKDDS(0.481)LGS(0.477)QQT(0.007)NEQCAQK;RKDTTSDKDDS(0.484)LGS(0.484)QQT(0.032)NEQCAQK;RKDT(0.002)T(0.002)S(0.002)DKDDS(0.491)LGS(0.491)QQT(0.011)NEQCAQK 208.86 9.4407e-21 1958250000.0 452110.0 457290.0 454670.0 383708.0 395798.0 419914.0 337618.0 385778.0 513230.0 357754.0 True False 427030.5570410589 435321.1019937161 483978.755697722 420175.4929539836 426945.05081743555 417293.1609668104 371747.7222741508 384439.82615926245 420040.36947544396 354584.5778884005 1.2043122675669766 1.2276932758500456 1.3649176695159204 1.1849796047425014 1.2040711227768321 1.1768508474109283 1.0484035275531698 1.0841978194558093 1.1845985292898005 1.0 18.435770264233003 -6.292583606822509 1.336739645130104 1.0853872445632327 1.2546677856369248 0.5764241618308766 0.06348544730617303 0.3250361708824205 1.1757699427166037 0.03083165040832442 0.027097283007884086 5.098194418568596e-07 6.292583606822509 0.16928054107369217 RKEAS(ph)SS(ph)EEPR ddPTM_KYSE-520_SHP099_60min_R1 2 RKEASSSEEPR 11 2 P30414 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 2 RKEAS(0.533)S(0.533)S(0.935)EEPR;RKEAS(0.931)S(0.207)S(0.861)EEPR 82.59 0.005430699999999999 941540000.0 1114170.0 1027690.0 950850.0 964130.0 945790.0 958430.0 862640.0 930210.0 1140310.0 939920.0 True False 1052364.7690571698 978318.2298058615 1012143.3124137917 1055760.6253237452 1020218.2921910223 952448.0828584435 949844.0697550888 926983.3186226469 933258.4488758326 931593.0400466956 1.1296400078347737 1.0501562246072853 1.0864650860455747 1.133285222129639 1.0951330123074818 1.0223864304639958 1.0195912044463946 0.9950517863209694 1.00178769994788 1.0 19.829340335617594 -6.330222846489085 3.250811059400376 1.00525657198758 1.0980720676056053 0.8068756354042199 0.022435846742198964 0.11855450492450212 2.4691378675587226 0.008759297859386233 0.00777944052711307 4.674951971922033e-07 6.330222846489085 0.09281549561802538 RKEASS(ph)S(ph)EEPR ddPTM_KYSE-520_SHP099_60min_R1 1 RKEASSSEEPR 11 2 P30414 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 2 RKEAS(0.291)S(0.761)S(0.948)EEPR 73.296 0.015465000000000001 260210000.0 741550.0 596850.0 577680.0 589610.0 585480.0 561680.0 599790.0 555810.0 775330.0 616200.0 True False 700414.7432567236 568176.4301098858 614918.1771206806 645646.3571272899 631553.9450744875 558174.3467753836 660422.6265862987 553882.0248370296 634549.6164787643 610740.9473963458 1.146827875620043 0.9303067569516713 1.0068396097267471 1.0571525617854012 1.034078274539917 0.9139297915997621 1.081346566660957 0.906901735012673 1.0389832533481134 1.0 19.22020104898634 RKECPDQLGPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 RKECPDQLGPSPK 13 2 E7EWM1;Q15596 E7EWM1 NCOA2 Nuclear receptor coactivator 2 1 RKECPDQLGPS(1)PK 83.10600000000001 0.0044507 331960000.0 284210.0 263240.0 220630.0 200300.0 193520.0 184770.0 199800.0 211230.0 302720.0 211030.0 True False 268444.3047414111 250593.5552687044 234852.16282048164 219336.45177760886 208748.92302181915 183616.7818930485 219997.73386008828 210497.2924314526 247753.67895019092 209160.43837885547 1.283437282987397 1.1980925131491669 1.1228326190208606 1.0486517119471772 0.9980325373181188 0.8778752966680087 1.05181331405322 1.0063915244343467 1.1845150109191822 1.0 17.67425047347841 -4.818679855771983 1.4066714498692192 1.0155738274653487 1.2872715159206713 0.6088892171584586 0.07107964599428179 0.3739117103815494 1.252806125337602 0.02279879672199726 0.10897942758477232 1.5181690875741211e-05 4.818679855771983 0.2716976884553226 RKEDEVEEWQHR ddPTM_KYSE-520_SHP099_60min_R1 20 RKEDEVEEWQHR 12 2 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ;;;;;;;;;;;;;;;;;;; 208.95 1.9764e-10 255345830000.0 57768415.0 61780808.0 63029534.0 68281518.0 65110897.0 57032075.0 65441690.0 65028415.0 77050858.0 39223648.0 False True 54563885.86146978 58812765.248796575 67092518.61246007 74770972.94113304 70234754.1635728 56676116.664950885 72057174.67454663 64802846.606111206 63060364.48126568 38876156.99425635 1.4035308549024323 1.5128235349364831 1.725801205668875 1.9233118374375295 1.806628010426788 1.457863149213137 1.8535055994653105 1.6669046432672172 1.622083285922072 1.0 25.212382276175994 -8.394749526327136 2.5932533987275526 1.0000178485322453 1.6770832578511348 0.6038812624851719 0.16151989345437157 3.125182870259687 19.633169229371347 0.16453536500805177 0.04431726835436295 4.0294936310752245e-09 8.394749526327136 0.6770654093188895 RKEDEVS(ph)IGS(ph)APLAK ddPTM_KYSE-520_SHP099_60min_R1 2 RKEDEVSIGSAPLAK 15 2 Q7Z7G8-3;Q7Z7G8-2;Q7Z7G8-6;Q7Z7G8 Q7Z7G8-3 VPS13B Vacuolar protein sorting-associated protein 13B 2 RKEDEVS(1)IGS(1)APLAK;RKEDEVS(1)IGS(1)APLAK 77.66 0.0094076 1340790000.0 2002870.0 1699490.0 1660990.0 1692930.0 1716770.0 1648610.0 1556780.0 1586130.0 2060510.0 1778350.0 True False 1891766.808477641 1617843.9494135028 1768060.0730779667 1853825.5582020334 1851870.031914885 1638320.4134691705 1714154.5151086494 1580628.0852355266 1686373.3252301055 1762595.202535365 1.0732848959060322 0.9178760654098865 1.0031004682951257 1.0517591081238846 1.050649649591185 0.9294932898447503 0.9725174065168013 0.8967618219781309 0.9567558806493858 1.0 20.749269752802306 -6.2716694684674525 24.88950481561545 0.9459915243568684 1.0145970118353604 0.34076213944783895 0.04695142224640881 806.6256773581742 1962491.1579863 0.016622083446885285 0.014813142336148527 5.349713588843522e-07 6.2716694684674525 0.06860548747849204 RKEDQDRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 RKEDQDRSPR 10 3 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 RKEDQDRS(1)PR;RKEDQDRS(1)PR;RKEDQDRS(1)PR;RKEDQDRS(1)PR;RKEDQDRS(1)PR 143.31 0.00027939 3379700000.0 1523500.0 1360587.0 790169.0 831295.0 1719230.0 1754160.0 1050856.0 1124143.0 1250245.0 1265919.0 True False 1438988.417978046 1295222.358237276 841104.5580551021 910301.0268620445 1854523.6199194018 1743211.6367673886 1157086.7798462315 1120243.610309949 1023232.024111658 1254703.942530078 1.1468748676092968 1.0322932082491856 0.670360974844023 0.7255106133056742 1.4780567407637237 1.3893410052193247 0.9221990468229468 0.892835012577554 0.8155167043217677 1.0 20.258915558176728 -6.971891115794081 24.997828128762936 0.8940084034156078 1.0643780601415234 0.1030778137834012 0.23917426276748452 579.933939955646 515746.5177518999 0.11340788853867044 0.07645809451657515 1.0668635665610504e-07 6.971891115794081 0.17036965672591553 RKEEAKES(ph)PSAAGPEDK ddPTM_KYSE-520_SHP099_60min_R1 6 RKEEAKESPSAAGPEDK 17 3 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3;H0YF21 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RKEEAKES(0.913)PS(0.087)AAGPEDK;RKEEAKES(0.982)PS(0.018)AAGPEDK;RKEEAKES(0.799)PS(0.201)AAGPEDK;RKEEAKES(0.98)PS(0.02)AAGPEDK;RKEEAKES(0.897)PS(0.103)AAGPEDK;RKEEAKES(0.999)PS(0.001)AAGPEDK 240.87 3.48e-23 10307910000.0 6056020.0 5290890.0 5484450.0 5252630.0 5441320.0 4530760.0 4448880.0 5388600.0 6420280.0 4404080.0 True False 5720080.498223432 5036707.702612194 5837986.422430268 5751838.375939208 5869520.927124261 4502481.846239913 4898616.207284634 5369908.204308692 5254518.994088035 4365063.277522396 1.310423270993254 1.1538681990129185 1.337434545907408 1.3176987388837909 1.3446588408807199 1.0314814608588023 1.122232576217104 1.2302016861841794 1.2037669696899542 1.0 22.05757113715508 -6.251163939610359 24.991258285824518 1.1322176443871739 1.2889584610334455 0.5287153948406895 0.08212049813460662 665.0804827900731 1617566.8926181411 0.02820525443480215 0.02789406576731343 5.608362288598742e-07 6.251163939610359 0.1567408166462716 RKEEEEEEDDDDDSKEPK ddPTM_KYSE-520_SHP099_60min_R1 2 RKEEEEEEDDDDDSKEPK 18 3 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3;F5H6N4 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 0 ; 214.19 1.6841999999999999e-18 1340650000.0 1339090.0 1653170.0 1064700.0 855570.0 1259090.0 1427090.0 1155420.0 1560430.0 1510220.0 1245350.0 False True 1264808.0082902664 1573749.231741242 1133332.2655802327 936883.1155635008 1358173.219757866 1418183.0019578435 1272221.1294125274 1555017.2325370992 1236002.1175480892 1234317.1678676398 1.0247025976923754 1.2749958217465227 0.9181856131338878 0.759029477959887 1.1003437812537238 1.1489615788200074 1.0307084455532358 1.2598198202359032 1.0013650864820751 1.0 20.2352817237108 -5.940038907561769 24.999991102882817 1.1034748992150758 0.9989561069489864 0.0975907676540273 0.13924463006111107 177.4882055111205 73999.8299480757 0.04540983048516687 0.0514899010115526 1.1480507653500987e-06 5.940038907561769 -0.1045187922660894 RKEEEVQQQK ddPTM_KYSE-520_SHP099_60min_R1 1 RKEEEVQQQK 10 2 Q96CS3 Q96CS3 FAF2 FAS-associated factor 2 0 129.16 0.00024937 445250000.0 357460.0 399180.0 253410.0 333660.0 530090.0 425170.0 372430.0 466650.0 462280.0 324900.0 False True 337630.98122115614 380002.7936186041 269745.21407033614 365370.94608146336 571805.0672004757 422516.3563211962 410078.85896653 465031.3000669289 378341.6051304648 322021.63876837544 1.048472961358998 1.180053598484832 0.8376617642901916 1.1346161316329066 1.7756728069189325 1.3120744243684346 1.2734512517076302 1.444099538917687 1.1748949746901927 1.0 18.296798110276473 -5.535950598341471 24.99295208125533 1.3582042513894883 1.0292412872566432 0.3180972785148597 0.203149828436566 240.56282475516332 459945.733171659 0.05809842889077788 0.07504707606785256 2.9110482354025388e-06 5.535950598341471 -0.3289629641328451 RKEENFS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 RKEENFSSPK 10 2 C9JMN1;Q96SB8;Q96SB8-2;C9JEF0;A0A087WWI9;A0A0A0MRY1 C9JMN1 SMC6 Structural maintenance of chromosomes protein 6 1 RKEENFS(0.5)S(0.5)PK 95.98 0.0020863 914300000.0 1303000.0 1101600.0 927230.0 1005500.0 1073900.0 988700.0 973290.0 887540.0 1002800.0 993260.0 True False 1230719.9925338984 1048677.4824646905 987000.7294204556 1101062.4176854028 1158409.8203448318 982529.1565603558 1071679.651595023 884461.3308933923 820716.7985308254 984460.4891445861 1.2501466601298457 1.0652306456462295 1.0025803374578057 1.1184424665352837 1.1766950864136692 0.9980381817193004 1.0885958993907647 0.8984223751447001 0.8336716481572152 1.0 19.90897377984345 -7.25582944587371 6.370283456840756 0.8986453866295729 1.0950045808259081 0.5358999960266259 0.08039714972932059 0.11095256915169437 23.664599758312796 0.04094768530561997 0.021638716742732204 5.548435657846615e-08 7.25582944587371 0.19635919419633519 RKEENFSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 RKEENFSSPK 10 2 C9JMN1;Q96SB8;Q96SB8-2;C9JEF0;A0A087WWI9;A0A0A0MRY1 C9JMN1 SMC6 Structural maintenance of chromosomes protein 6 1 RKEENFS(0.137)S(0.863)PK;RKEENFS(0.019)S(0.981)PK;RKEENFS(0.068)S(0.932)PK 101.53 0.0011905999999999998 4239200000.0 2173340.0 1815000.0 1717670.0 1608170.0 1865300.0 1825950.0 1573100.0 1692260.0 2048930.0 1677720.0 True False 2052780.497754119 1727804.6756294596 1828393.7565691709 1761009.9932860606 2012088.4978947914 1814553.5687482378 1732124.2999765014 1686389.9450364532 1676895.9613220606 1662856.706046409 1.2344903143427126 1.039058067569436 1.0995497988015703 1.0590269064572737 1.2100191739784436 1.091226659609475 1.0416557804880147 1.0141522952064803 1.0084428533286138 1.0 20.66523242142304 -6.803203887441852 2.747611042417748 1.0111465292352053 1.1202395186229082 0.4673659467218513 0.0568708620483857 0.26347503318399135 4.054183494618386 0.02612567044262197 0.01715717020142018 1.5732441030148528e-07 6.803203887441852 0.10909298938770284 RKEEVEENKK ddPTM_KYSE-520_SHP099_60min_R1 1 RKEEVEENKK 10 3 O60885;O60885-2;O60885-3;M0QZD9 O60885 BRD4 Bromodomain-containing protein 4 0 142.07 0.00011457 553750000.0 391050.0 372240.0 128770.0 120370.0 452180.0 524370.0 212180.0 323670.0 231160.0 329750.0 False True 369357.67696115124 354357.031656369 137070.72023928456 131809.92860943987 487763.9934477382 521097.212324825 233629.22507724492 322547.26431514573 189187.1710693913 326828.6715416182 1.1301262989532956 1.0842287183217503 0.41939625306658584 0.4032997716745768 1.4924149437287866 1.5944048294993873 0.7148369938758409 0.9869001480002428 0.5788573266140156 1.0 18.318175026085896 -5.753783834937605 24.999567792763983 1.0699192445303232 0.7581985627759913 0.14215016251767731 0.36303724957907113 390.3257899866931 1274621.6675207529 0.11816046640134358 0.14958787645405597 1.7628532679337616e-06 5.753783834937605 -0.3117206817543319 RKEEWER ddPTM_KYSE-520_SHP099_60min_R1 2 RKEEWER 7 2 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 0 ; 146.58 0.00096801 5924200000.0 1741100.0 1827270.0 1430290.0 1281870.0 1871140.0 1841250.0 1752630.0 1789600.0 1730270.0 1164410.0 False True 1644517.7122031997 1739485.2064118139 1522488.781944916 1403698.5393917295 2018388.0726697366 1829758.0757729919 1929802.944420452 1783392.295295782 1416096.584557172 1154094.2332972721 1.4249423181890244 1.5072297878502234 1.3192066453664988 1.216277231869821 1.7488936470145582 1.5854494572296176 1.6721363721807736 1.5452744185373768 1.227019894650503 1.0 20.138329596046102 -7.963177560781902 3.481163059317714 1.0026815348743785 1.5029493810050647 0.5459445094794444 0.1487840014924798 0.16667525262772204 4.536738092676484 0.15625822949645488 0.041463936088443384 1.0884849765600691e-08 7.963177560781902 0.5002678461306862 RKELEEVS(ph)PETPVVPATTQR ddPTM_KYSE-520_SHP099_60min_R1 4 RKELEEVSPETPVVPATTQR 20 2 Q15149 Q15149 PLEC Plectin 1 RKELEEVS(0.999)PET(0.001)PVVPATTQR;RKELEEVS(0.998)PET(0.002)PVVPATTQR;RKELEEVS(1)PETPVVPATTQR;RKELEEVS(0.997)PET(0.003)PVVPATTQR 183.24 6.2125e-13 3340640000.0 1820980.0 1736430.0 1725290.0 1410390.0 1427750.0 1489500.0 1321010.0 1305860.0 1933230.0 1319540.0 True False 1719966.6093663687 1653009.2963654345 1836504.953961602 1544433.041550783 1540105.8022137375 1480203.4779980301 1454550.5826151911 1301330.2764500151 1582204.164762411 1307849.9021865854 1.3151100951957624 1.263913613941309 1.4042169142584036 1.180894718093151 1.177586051456551 1.1317839115354813 1.1121693553544163 0.9950150046074323 1.2097750377295855 1.0 20.318765546095413 -5.786571311173399 1.143071666316657 1.081989158406291 1.3242048328977807 0.6675231192361804 0.0706194922930752 0.284133881537902 0.7878509477989686 0.029073252153097424 0.041949620340474204 1.634664717072159e-06 5.786571311173399 0.24221567449148962 RKENGVNS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 RKENGVNSPR 10 2 Q13625;Q13625-3;H7C5L8 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 RKENGVNS(1)PR;RKENGVNS(1)PR;RKENGVNS(1)PR;RKENGVNS(1)PR 92.65 0.0024712 739850000.0 1264110.0 1178000.0 917510.0 934010.0 1128230.0 1117470.0 879880.0 872840.0 1230810.0 1064550.0 True False 1193987.2983591887 1121407.1117859508 976654.1626679039 1022778.0295796533 1217015.2822494172 1110495.45522555 968826.8572012737 869812.3217623885 1007325.9301951794 1055118.9152073676 1.1316139642179845 1.0628253324086747 0.9256342091791212 0.9693485870060834 1.1534389770751396 1.0524836956479915 0.9182157984636883 0.824373735723845 0.9547036980160712 1.0 20.00897417367086 -6.776017494416533 7.787793229630576 0.9092201992523514 1.0454221343017713 0.3894227666003016 0.07560437033272642 0.16231984596101703 52.97152123817925 0.03265625565492182 0.022825308422636196 1.6748754066953939e-07 6.776017494416533 0.1362019350494199 RKEPEPK ddPTM_KYSE-520_SHP099_60min_R1 2 RKEPEPK 7 2 P39748;P39748-2 P39748 FEN1 Flap endonuclease 1 0 ; 64.567 0.023494 1090350000.0 905200.0 1339380.0 680360.0 367300.0 1495840.0 2279420.0 520140.0 728950.0 879100.0 2508140.0 False True 854986.7515285363 1275034.1743496326 724217.0942144897 402208.0815672284 1613554.0978346341 2265193.2942720815 572720.8272772091 726421.442588209 719477.6003075874 2485919.830903394 0.34393174747627736 0.5129023705829965 0.2913276145157529 0.16179447002563402 0.6490772863130753 0.9112093101767085 0.23038587976872926 0.29221434800824786 0.2894210792172353 1.0 21.245348340604735 -5.771791291099061 24.99895201514373 0.5275366432424015 0.33814987855710343 0.1608052446218896 0.2548407730868706 507.13968881011886 1224694.206321343 0.08260238956122282 0.09467541921314637 1.6912535020815283e-06 5.771791291099061 -0.18938676468529803 RKEQEEEEQKER ddPTM_KYSE-520_SHP099_60min_R1 7 RKEQEEEEQKER 12 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 0 ;;;;;; 190.1 4.2695e-08 7758019000.0 4140968.0 3953070.0 2798111.0 2662262.0 3665447.0 3941785.0 2950720.0 3508533.0 3856602.0 2630458.0 False True 3911260.250224944 3763158.583520963 2978481.7121958956 2915282.5800417396 3953896.8253594404 3917182.8576840973 3249007.573852049 3496362.717920757 3156340.293824869 2607154.188585355 1.5002028907032916 1.4433970188632599 1.1424263763287523 1.118185718668053 1.5165565744712743 1.5024745658827203 1.2461892695402739 1.341064802852296 1.2106458097660513 1.0 21.3140444765281 -8.133327770943833 1.4522239182307517 0.9998327679598455 1.3515049236754302 0.3859188009751512 0.1377376556995242 0.697380840661934 3.052956152612807 0.14274615067594654 0.04215046984341018 7.356516765341265e-09 8.133327770943833 0.35167215571558463 RKGAAEEEQQDS(ph)GSEPR ddPTM_KYSE-520_SHP099_60min_R1 1 RKGAAEEEQQDSGSEPR 17 2 D6RGI7;A0A499FJW5;Q9UJV9 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 1 RKGAAEEEQQDS(0.819)GS(0.181)EPR 61.222 0.033035 0.0 44672.0 46431.0 38902.0 40552.0 36003.0 37096.0 35049.0 40648.0 53352.0 34731.0 True False 42193.95510857581 44200.38506564814 41409.685165400755 44406.04988759662 38836.23127095164 36864.47010393746 38592.09496527644 40507.001575314534 43664.621694472065 34423.31036030914 1.2257378696857233 1.2840248251258308 1.202954763268412 1.2899994051355912 1.1281957157650562 1.0709158915303811 1.12110353598572 1.1767317306594671 1.2684608550843608 1.0 15.07109822215583 -5.772319146475546 24.992214087643877 1.133248694879541 1.24965215482394 0.43209290850067394 0.0689555375398006 218.7119735971518 502408.0006298575 0.021447357736701003 0.02455060015333042 1.6891991473054293e-06 5.772319146475546 0.11640345994439905 RKGS(ph)DDDGGDS(ph)PVQDIDTPEVDLYQLQVNTLR ddPTM_KYSE-520_SHP099_60min_R1 1 RKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLR 32 2 O75446 O75446 SAP30 Histone deacetylase complex subunit SAP30 2 RKGS(0.991)DDDGGDS(0.95)PVQDIDT(0.058)PEVDLYQLQVNTLR 211.6 1.7017e-22 249880000.0 113700.0 112250.0 113980.0 96645.0 103830.0 96340.0 92921.0 106770.0 146230.0 98981.0 True False 107392.83434466939 106857.34150931492 121327.33317444794 105830.11174262132 112000.83028811228 95738.70632449158 102314.36150156792 106399.63979030527 119678.3181583193 98104.10534605265 1.0946823679381374 1.0892239538028108 1.2367202447489596 1.0787531405471356 1.1416528380034687 0.9758888885106556 1.042916207641505 1.0845584842243954 1.2199114169194625 1.0 16.58202588947475 RKGS(ph)DDDGGDSPVQDIDTPEVDLYQLQVNTLR ddPTM_KYSE-520_SHP099_60min_R1 1 RKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLR 32 2 O75446 O75446 SAP30 Histone deacetylase complex subunit SAP30 1 RKGS(0.904)DDDGGDS(0.096)PVQDIDTPEVDLYQLQVNTLR 329.89 7.177199999999999e-69 277290000.0 176710.0 218800.0 163510.0 166050.0 166550.0 167700.0 128340.0 167310.0 263070.0 161430.0 True False 166907.5440373482 208288.51957450432 174050.11622524995 181831.34207524708 179656.53746012843 166653.32209484364 141313.85967769637 166729.64066044748 215303.11945503007 159999.85579063962 1.0431730904542023 1.3018044206680448 1.0878142068640058 1.1364469122595589 1.1228543711639944 1.0415842018814698 0.883212419032465 1.0420611933464103 1.3456457094358572 1.0 17.287711079235557 -6.107531631636418 3.719292165024859 1.0543929134315662 1.148274166534524 0.08329575194955263 0.12485758235804365 0.5995398601950724 14.976505151864956 0.043550490997197475 0.04421173857777976 7.806715782161932e-07 6.107531631636418 0.0938812531029578 RKGS(ph)GS(ph)EQEGEDEEGGER ddPTM_KYSE-520_SHP099_60min_R1 7 RKGSGSEQEGEDEEGGER 18 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 2 RKGS(1)GS(1)EQEGEDEEGGER;RKGS(1)GS(1)EQEGEDEEGGER;RKGS(1)GS(1)EQEGEDEEGGER;RKGS(1)GS(1)EQEGEDEEGGER;RKGS(1)GS(1)EQEGEDEEGGER;RKGS(1)GS(1)EQEGEDEEGGER;RKGS(1)GS(1)EQEGEDEEGGER 160.21 2.3557999999999998e-08 16285820000.0 11224980.0 9893770.0 9078850.0 9969460.0 9523100.0 9422520.0 9547780.0 10369720.0 12371380.0 9708620.0 True False 10602307.982957145 9418458.438348474 9664087.197673596 10916954.480972543 10272513.790972954 9363710.557573667 10512962.779753113 10333749.861630835 10125049.249110775 9622609.179992067 1.101812178447622 0.9787842634128718 1.0043104751430385 1.13451084594309 1.0675393335450232 0.9730947586485463 1.0925272535865143 1.073903103444897 1.0522145355506503 1.0 23.197996704551198 RKGS(ph)GS(ph)EQEGEDEEGGERK ddPTM_KYSE-520_SHP099_60min_R1 1 RKGSGSEQEGEDEEGGERK 19 3 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 2 RKGS(1)GS(1)EQEGEDEEGGERK 59.943000000000005 0.054405999999999996 32960000.0 18810.0 16059.0 14211.0 12944.0 15452.0 14345.0 13627.0 11249.0 17743.0 15406.0 True False 17766.57180319463 15287.501534949573 15127.063798403942 14174.19386824449 16667.984490146504 14255.467533992434 15004.550146703827 11209.979844536338 14521.318464631457 15269.514825686627 1.1635321754498325 1.0011779489701067 0.9906708871297567 0.9282674682237074 1.0915857301574081 0.9335900777941978 0.9826474722997045 0.7341411939087106 0.9510006460849337 1.0 13.898366602149439 -6.718384230518995 2.0471281465735265 0.8852247847495578 1.0231393783702702 0.2585321786977165 0.09160254576096222 0.4034252469378815 3.46195978594151 0.043663828567793266 0.0289630899910883 1.9125630868428569e-07 6.718384230518995 0.13791459362071246 RKGS(ph)GSEQEGEDEEGGER ddPTM_KYSE-520_SHP099_60min_R1 2 RKGSGSEQEGEDEEGGER 18 2 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 RKGS(0.884)GS(0.116)EQEGEDEEGGER;RKGS(0.894)GS(0.106)EQEGEDEEGGER 97.5 0.00067318 105992000.0 53125.0 61068.0 41431.1 35306.6 50853.0 58675.0 43215.0 50453.8 70609.0 43533.0 True False 50178.05034793806 58134.2016150632 44101.81499810384 38662.12864868364 54854.84178600959 58308.78756061384 47583.59393775636 50278.78754380545 57788.18550804046 43147.331488161486 1.1629467829709381 1.3473417615875902 1.0221214957454376 0.896049125524519 1.2713379922709782 1.3513880360506714 1.1028166122118601 1.1652815089526602 1.3393223523891864 1.0 15.396983716060438 RKGS(ph)QITQQSTNQSR ddPTM_KYSE-520_SHP099_60min_R1 1 RKGSQITQQSTNQSR 15 2 P50750;P50750-2 P50750 CDK9 Cyclin-dependent kinase 9 1 RKGS(1)QITQQSTNQSR 198.88 1.7824e-11 787860000.0 262650.0 244360.0 259740.0 200480.0 181880.0 190550.0 163300.0 185280.0 322130.0 178160.0 True False 248080.2809202055 232620.57880816248 276483.25599869376 219533.55892348997 196192.92124435978 189360.70676906643 179807.95765441665 184637.30692467713 263639.3122364728 176581.64100638247 1.404904153717989 1.3173542701404304 1.5657531237276268 1.243241130121534 1.111060697625233 1.0723691641432989 1.0182709631060545 1.0456200648741478 1.4930165487982052 1.0 17.429975829847415 -5.506293164807862 4.562686585486728 1.1205854593520088 1.4188131669146522 0.4769771982135149 0.14299390599806877 0.17491834259934375 9.220518436904488 0.04181275104369603 0.059374023115251216 3.1167849289264685e-06 5.506293164807862 0.2982277075626434 RKHDDDRR ddPTM_KYSE-520_SHP099_60min_R1 1 RKHDDDRR 8 3 Q2QGD7-2;Q2QGD7;H0YAA9;Q2QGD7-3;P98168;P98169 Q2QGD7-2 ZXDC;ZXDA;ZXDB Zinc finger protein ZXDC;Zinc finger X-linked protein ZXDA;Zinc finger X-linked protein ZXDB 0 78.905 0.027263 3740900.0 10187.0 4561.1 4611.7 4485.1 10817.0 11073.0 7884.4 3881.1 2727.0 3170.0 False True 9621.906802718964 4341.977909649326 4908.977560980889 4911.362555505514 11668.23635968902 11003.88929967921 8681.432096328732 3867.6373699555506 2231.845542075749 3141.91626622268 3.062432600817447 1.381952140586293 1.5624151457360866 1.5631742348786792 3.7137324393806894 3.5022859832316486 2.7631010379426337 1.2309804088462732 0.7103453284447172 1.0 11.617429017199033 -4.228677249456691 21.057098153696934 2.0506142159080203 3.062448023932934 0.09392504527886159 0.9937759816837998 4343.88986645664 2791532.7946265615 0.27220048159889676 26.035564716179472 5.9063985737544135e-05 4.228677249456691 1.0118338080249138 RKHEQWVNEDR ddPTM_KYSE-520_SHP099_60min_R1 1 RKHEQWVNEDR 11 2 O43683-2;O43683-3;O43683;A0A590UK50 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 0 163.51 1.2349000000000002e-05 288440000.0 164950.0 187120.0 172570.0 189240.0 148760.0 137090.0 145070.0 153580.0 210310.0 87865.0 False True 155799.8946803271 178130.47432715382 183694.13832176253 207225.3127029193 160466.56567138215 136234.37045904662 159735.09134676182 153047.26682584142 172123.00548366373 87086.58445793553 1.7890229092126284 2.0454410450922462 2.1093276245147754 2.3795319794980943 1.8426094750436623 1.5643554206084451 1.834210083459145 1.7574149655595477 1.9764583323026337 1.0 16.41016287074216 -5.992060322352766 24.642683753415266 1.688661441471227 2.084180130862561 0.36191786470357135 0.27837540940650884 189.52171899261293 588219.9499356606 0.08330878073422979 0.09428608488075911 1.0184499182344438e-06 5.992060322352766 0.39551868939133406 RKHS(ph)PS(ph)PPPPTPTESR ddPTM_KYSE-520_SHP099_60min_R1 5 RKHSPSPPPPTPTESR 16 2 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 2 RKHS(1)PS(1)PPPPTPTESR;RKHS(0.997)PS(0.991)PPPPT(0.01)PT(0.001)ES(0.001)R;RKHS(1)PS(1)PPPPTPTESR;RKHS(0.991)PS(0.923)PPPPT(0.016)PT(0.064)ES(0.006)R;RKHS(1)PS(1)PPPPTPTESR 137.61 1.1117e-05 4500640000.0 3216910.0 3080170.0 3084680.0 2941300.0 2873670.0 3018170.0 2660900.0 2585590.0 3749630.0 2579080.0 True False 3038461.589548904 2932194.009770575 3283523.408462503 3220840.2676659096 3099811.480054316 2999332.481496685 2929889.739881429 2576621.1917712395 3068791.7124801944 2556231.357693879 1.1886488992491167 1.1470769267206993 1.2845173026219174 1.2599956017172138 1.2126490314440206 1.1733415570813406 1.1461754942731976 1.0079765213801912 1.2005140705451345 1.0 21.285586986005196 -6.80227931882152 1.8855333621831631 1.0770354209345159 1.2194291062314795 0.5041656017766251 0.06295845349594274 0.29379803501585533 2.1318275491506165 0.03311448955842276 0.020155260283933697 1.5765969467822981e-07 6.80227931882152 0.1423936852969636 RKLEDSTR ddPTM_KYSE-520_SHP099_60min_R1 2 RKLEDSTR 8 2 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 0 ; 119.75 0.00063246 357970000.0 358230.0 304590.0 231970.0 216310.0 301890.0 262380.0 217813.0 232420.0 273830.0 201633.0 False True 338358.26778619987 289957.0392010894 246923.15736512264 236868.03736402714 325647.0254808651 260742.38909508093 239831.663690027 231613.7892672358 224109.37469255697 199846.68848810004 1.6930891892479247 1.4508973923696264 1.2355629169198157 1.185248748207962 1.6294842208519051 1.3047120823851277 1.2000782475027494 1.158957353856916 1.1214064960896346 1.0 17.608534141559055 -1.0000000000513272 0.11864370646408821 0.8684891684747877 3.0689201796501497 0.5776329498657216 0.1386160263389855 80.00686327709278 0.6553075393609513 1.0858055795553017 29.057188480107538 0.09999999998818149 1.0000000000513272 2.200431011175362 RKLEEQAR ddPTM_KYSE-520_SHP099_60min_R1 1 RKLEEQAR 8 2 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 0 170.95 8.204600000000001e-05 1283800000.0 1206900.0 1108300.0 817230.0 642540.0 1085000.0 983160.0 674380.0 703950.0 987930.0 692980.0 False True 1139950.8511044967 1055055.6044077836 869909.9534142325 703606.8084133042 1170383.327194471 977023.7337553155 742552.9117145458 701508.1617531645 808546.8156886307 686840.7363302823 1.6597018650861248 1.536099343852018 1.2665380886725934 1.0244104217996755 1.7040097729900323 1.4224894973111968 1.0811136737199483 1.0213549148253038 1.1771969438047765 1.0 19.389616082150226 -1.0000000003703213 0.1469436704237789 0.9090363796010521 3.411652853709814 0.44096146397578495 0.19352193674152757 74.72523441808292 0.7248961438741114 0.7966937464643516 39.68700727002883 0.09999999991473037 1.0000000003703213 2.5026164741087618 RKLEGDSTDLSDQIAELQAQIAELK ddPTM_KYSE-520_SHP099_60min_R1 1 RKLEGDSTDLSDQIAELQAQIAELK 25 2 P35579 P35579 MYH9 Myosin-9 0 163.71 2.436e-10 238670000.0 403710.0 387540.0 334540.0 283370.0 398560.0 327090.0 269250.0 289890.0 368780.0 265580.0 False True 381315.40152406687 368921.9966906004 356104.9836829251 310301.39960170304 429924.4045038046 325048.5099821254 296468.4176267707 288884.4392508347 301818.84818727337 263227.16781811335 1.448617195120038 1.4015346506539965 1.3528428187510992 1.1788350046607552 1.633282795493499 1.2348592764054274 1.1262835066919332 1.0974719731454552 1.1466097921770233 1.0 18.005948872528705 -6.540764024473145 4.723438832787592 1.1064436129626913 1.3922852752949826 0.6334209400684567 0.11089956014067764 0.13397899002403324 7.77630422509753 0.04224233976054379 0.03352964861320939 2.8789622847271236e-07 6.540764024473145 0.28584166233229125 RKLES(ph)TESR ddPTM_KYSE-520_SHP099_60min_R1 3 RKLESTESR 9 2 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 RKLES(0.755)T(0.244)ES(0.001)R;RKLES(0.613)T(0.381)ES(0.006)R;RKLES(0.81)T(0.188)ES(0.001)R 109.6 0.00072303 2483020000.0 1243620.0 1315880.0 1322630.0 1279260.0 1301130.0 1496680.0 1445090.0 1643490.0 2174150.0 1457680.0 True False 1174633.9195049913 1252663.1496238506 1407888.8460828236 1400840.485776455 1403521.528582988 1487338.6649547429 1591173.7999192937 1637789.116783449 1779379.1658613826 1444766.0892578785 0.8130270555480411 0.8670352653883897 0.974475284650405 0.9695967369333908 0.9714524302712032 1.0294667600613 1.1013366189516667 1.1336015767263192 1.2316036340355845 1.0 20.46240450552134 -5.4961761196119365 0.5463964876681227 1.1354688742006016 0.7966081282542767 0.7174710326623895 0.06217304540662417 0.7177396613956374 0.38590148148875003 0.046011290503252325 0.13391518669941915 3.1902438518965635e-06 5.4961761196119365 -0.33886074594632487 RKLEST(ph)ESR ddPTM_KYSE-520_SHP099_60min_R1 1 RKLESTESR 9 2 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 RKLES(0.307)T(0.578)ES(0.115)R 81.709 0.0207 535280000.0 574280.0 545940.0 608040.0 565090.0 643490.0 712760.0 674280.0 672350.0 944970.0 682350.0 True False 542423.5436012018 519712.22292735375 647235.2312983974 618795.983699497 694129.0020427371 708311.4004551017 742442.8027386396 670017.7747776697 773387.268755159 676304.9098602666 0.802039931535132 0.7684584502495081 0.9570169044493919 0.914965978625452 1.0263551127939514 1.0473255333921028 1.097793010096641 0.9907036974137954 1.143548209512409 1.0 19.367314301959798 -5.093561988347839 0.8413984337387134 1.0620624272954329 0.7441325174330766 0.7809886213888771 0.05309704746957355 0.39088434402317335 0.44716445999053983 0.021267154389063698 0.09303600617842525 8.061911227053212e-06 5.093561988347839 -0.31792990986235625 RKLESTES(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 RKLESTESR 9 2 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 RKLES(0.02)T(0.02)ES(0.96)R;RKLES(0.043)T(0.043)ES(0.914)R 78.903 0.009407200000000001 921010000.0 240180.0 277050.0 341240.0 366340.0 337200.0 432470.0 316690.0 358420.0 406320.0 343000.0 True False 226856.73661304047 263740.1021394721 363236.8764033046 401156.843455863 363735.72159444727 429770.7943133988 348704.1157965537 357176.72467585665 332542.5304936625 339961.28684996173 0.667301676361642 0.7757945164381936 1.068465411956201 1.180007427236588 1.0699327707715676 1.264175689813392 1.0257171309933608 1.0506394065789402 0.9781776436221886 1.0 18.37501094300716 -4.702678132583014 3.4375259808995446 1.0916591874685433 0.6889880712838642 0.7599233054871737 0.08136916190260393 0.10515837995435796 2.451858726654745 0.021971168259790414 0.06604792785703122 1.982996133546098e-05 4.702678132583014 -0.4026711161846791 RKLESTESR ddPTM_KYSE-520_SHP099_60min_R1 2 RKLESTESR 9 2 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ; 125.74 0.00043692 1207230000.0 779210.0 789130.0 630270.0 487010.0 728070.0 663150.0 554510.0 584730.0 897100.0 541510.0 False True 735985.6679833747 751219.010291721 670898.2126676562 533295.2839751038 785364.9668483663 659011.0348669976 610565.2822960843 582701.7081070081 734209.2540506617 536712.6426884054 1.371284388414639 1.3996670667731033 1.2500138049797234 0.9936327963206084 1.4632876224313556 1.2278656816541473 1.1376018258816292 1.085686569983227 1.3679745838909094 1.0 19.033790346764373 -1.0000025452858143 0.0265358439080827 5.532065892006556e-08 2.9387787141641613 0.26974748124487946 0.1379892178629598 2483.9774483155666 5.075528656686569 188.89906605075794 413.50425593777635 0.09999941392800006 1.0000025452858143 2.9387786588435025 RKLS(ph)GDQPAAR ddPTM_KYSE-520_SHP099_60min_R1 1 RKLSGDQPAAR 11 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 RKLS(1)GDQPAAR 69.258 0.019235 764860000.0 480790.0 500840.0 531680.0 331270.0 362360.0 331840.0 252890.0 322940.0 698320.0 380630.0 True False 454119.6202688964 476778.89462383307 565952.943518078 362753.80120004294 390875.6704536296 329768.8634702023 278454.58916855726 321819.7965147623 571522.6912146447 377257.9143256594 1.2037378223877044 1.2638009078644918 1.5001751375573047 0.9615538532795468 1.0360966744788154 0.8741204649335382 0.7381013852719007 0.8530498216054881 1.5149389038961039 1.0 18.525191641162564 -5.280755903653906 24.429125527782478 0.976456287611345 1.3166942451121486 0.3403394761521211 0.20640587557829276 649.5417015979654 821457.6657203223 0.05934868776385282 0.08819311088833998 5.238948102955696e-06 5.280755903653906 0.34023795750080366 RKNT(ph)HENIQLSQSK ddPTM_KYSE-520_SHP099_60min_R1 1 RKNTHENIQLSQSK 14 2 Q6ZWT7 Q6ZWT7 MBOAT2 Lysophospholipid acyltransferase 2 1 RKNT(1)HENIQLSQSK 169.28 2.0452e-08 251670000.0 173180.0 248160.0 197120.0 248130.0 189440.0 204550.0 180310.0 207050.0 328240.0 136380.0 True False 163573.3601742291 236238.0211042457 209826.6706031514 271712.2005969952 204347.85023384364 203273.32757603002 198537.49445601864 206331.7918758335 268639.89025703864 135171.77930203444 1.2101147223099933 1.747687441299296 1.5522964311530176 2.0101252051278258 1.5117641514301503 1.5038148393521265 1.46877917477432 1.5264413396142078 1.9873962719450229 1.0 17.04443445659863 -5.903801251150903 19.65650025998634 1.524559509553307 1.6488886274042351 0.04089461070427902 0.28900486743646925 12.801638798318992 2590.925821822405 0.08686382426212214 0.09849475485529462 1.2479544926561956e-06 5.903801251150903 0.12432911785092804 RKPDTIEVQQMK ddPTM_KYSE-520_SHP099_60min_R1 3 RKPDTIEVQQMK 12 2 E7EQR4;P15311;P26038;A0A2R8Y7M3;A0A2R8Y5S7;P35241;P35241-5;P35241-4 E7EQR4;P26038;A0A2R8Y7M3 EZR;MSN;RDX Ezrin;Moesin;Radixin 0 ;; 182.08 1.9402e-07 4021060000.0 3303780.0 2599570.0 2114060.0 1957020.0 3138480.0 2760610.0 2235370.0 2415180.0 2554050.0 2510590.0 False True 3120512.73747785 2474682.755165877 2250335.6902155974 2143014.592400484 3385460.5204915255 2743380.0089937155 2461343.0147088375 2406802.30428725 2090298.9023610407 2488348.1258094665 1.2540499076923728 0.9945082560989555 0.9043492214271895 0.8612197667090312 1.3605252759359088 1.1024904355379481 0.9891473741875068 0.9672289336542533 0.8400347526458183 1.0 21.246756905373495 -7.0742234339415075 2.7764210517986854 0.9264612727622141 1.069362225204729 0.16445118022481942 0.1453251287821489 0.5842054594257386 8.765776844825579 0.08381683283643199 0.044843886282201685 8.429009941456372e-08 7.0742234339415075 0.14290095244251488 RKPEEES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 RKPEEESPR 9 2 P49321-4;P49321;P49321-3;Q5T624;P49321-2;H0YF33 P49321-4 NASP Nuclear autoantigenic sperm protein 1 RKPEEES(1)PR;RKPEEES(1)PR;RKPEEES(1)PR;RKPEEES(1)PR;RKPEEES(1)PR;RKPEEES(1)PR;RKPEEES(1)PR;RKPEEES(1)PR;RKPEEES(1)PR 146.36 0.00024927 53864070000.0 11033130.0 8952510.0 7956310.0 9317620.0 9352700.0 9681720.0 9810240.0 10317880.0 9999830.0 9493530.0 True False 10421100.284900619 8522417.981608536 8469186.473146103 10203163.803355388 10088704.280416328 9621292.794228312 10801954.797915885 10282089.682491288 8184112.947200341 9409424.710054576 1.1075172612588102 0.9057320977872094 0.9000748434807319 1.0843557515745517 1.0721914029064814 1.022516582118707 1.1479931165582633 1.0927437116856051 0.8697782488715904 1.0 23.16567508894931 -5.274460554018172 24.689250791180992 1.0501742187301168 0.9645704657595094 0.11194612975283924 0.08770083605952446 1178.0459223046696 2233672.36532834 0.024685541690308767 0.03688380629968616 5.3154427627404795e-06 5.274460554018172 -0.0856037529706074 RKPEEES(ph)PRK ddPTM_KYSE-520_SHP099_60min_R1 7 RKPEEESPRK 10 3 P49321-4;P49321;P49321-3;Q5T624;P49321-2;H0YF33 P49321-4 NASP Nuclear autoantigenic sperm protein 1 RKPEEES(1)PRK;RKPEEES(1)PRK;RKPEEES(1)PRK;RKPEEES(1)PRK;RKPEEES(1)PRK;RKPEEES(1)PRK;RKPEEES(1)PRK 121.04 0.00065407 13498070000.0 11923440.0 9571500.0 8058130.0 10198580.0 11086270.0 11083900.0 10758930.0 11788870.0 11197600.0 8377360.0 True False 11262023.01441165 9111670.772885596 8577569.953263864 11167849.976885118 11958696.376752296 11014721.268736055 11846547.641438046 11747977.161512947 9164398.10852489 8303143.107887455 1.3563566071399453 1.0973760965567474 1.0330509593548642 1.3450147530609673 1.440261383113137 1.3265724949715456 1.426754602143926 1.4148831362852363 1.1037263828223434 1.0 22.985226133228373 -3.923223505546142 19.728786460239665 1.2647996686002876 4.351507299027322 0.026559548688237067 0.16358275810668496 1624.1052226526635 431333.86253060034 0.04129087954133173 7411.003018638189 0.00011933737878726026 3.923223505546142 3.086707630427034 RKPNAGGS(ph)PAPVR ddPTM_KYSE-520_SHP099_60min_R1 2 RKPNAGGSPAPVR 13 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RKPNAGGS(1)PAPVR;RKPNAGGS(1)PAPVR 82.663 0.0048975 38673000000.0 4056700.0 3777450.0 3421320.0 3530710.0 3041400.0 3235140.0 2538150.0 3050870.0 3309370.0 2716170.0 True False 3831666.764169038 3595975.631931957 3641863.7615055516 3866267.6168533335 3280740.876801161 3214948.2912457488 2794730.9719568747 3040287.2440484143 2708471.8304287535 2692106.846948283 1.4232966899187292 1.3357477382475667 1.3527931722449626 1.4361493940094003 1.2186518081628677 1.194212738952077 1.0381203759148432 1.1293337957573346 1.006078875917953 1.0 21.36030423948912 -6.283009484392698 1.221682780009093 1.0431521552937488 1.3852423634083917 0.8901367707839088 0.05290655396822897 0.1389560421298325 0.4249546621842144 0.02583782645218484 0.02283525160852833 5.211833290554753e-07 6.283009484392698 0.34209020811464286 RKPQEESER ddPTM_KYSE-520_SHP099_60min_R1 1 RKPQEESER 9 2 K7ENQ6;K7ERQ1;K7ELB1;P26358;P26358-2;K7EJL0 K7ENQ6;P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 0 151.22 0.00017228 421730000.0 261400.0 274680.0 89347.0 92678.0 290190.0 315370.0 149900.0 195950.0 158400.0 235430.0 False True 246899.62091201867 261483.96049691425 95106.45058025453 101486.08925534322 313026.30204475904 313401.6588494381 165053.3548830193 195270.29518507406 129638.55293905348 233344.27336176837 1.0580916229696136 1.1205930050467496 0.40757996418795756 0.43491999093546607 1.3414783981411644 1.343086994740821 0.7073383567769269 0.8368334580139201 0.55556775005173 1.0 17.832100536150886 -5.751385480360106 24.993401448317282 0.9620087211249971 0.7565520696251339 0.09595716546055766 0.31385702306134655 608.7323562123624 1513265.697689967 0.10277782787555974 0.13111408860659993 1.7726154066243452e-06 5.751385480360106 -0.20545665149986325 RKPS(ph)PEPEGEVGPPK ddPTM_KYSE-520_SHP099_60min_R1 16 RKPSPEPEGEVGPPK 15 2 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK;RKPS(1)PEPEGEVGPPK 179.87 6.136899999999999e-09 132623030000.0 91910850.0 81516610.0 76843990.0 70019190.0 73596830.0 79779860.0 74944310.0 79181170.0 95108110.0 78377370.0 True False 86812371.93076292 77600429.69667388 81797476.55013119 76673792.76556297 79388481.81231883 79281924.30090357 82520412.2407805 78906509.002294 77838874.70434535 77683007.47847123 1.1175207390731077 0.9989369904117031 1.0529648529995472 0.9870085525050255 1.0219542778943034 1.0205825813692326 1.0622710798581 1.015749924771667 1.0020064520019685 1.0 26.211095719632464 -4.253632828425211 24.641773331190098 1.020154856105123 1.1175207970071048 0.6325969368559434 0.022710252108606447 517.0439930358343 1632029.3957896072 0.0055089842962503365 0.05798115920637512 5.576570173532593e-05 4.253632828425211 0.0973659409019818 RKPS(ph)SEEGKR ddPTM_KYSE-520_SHP099_60min_R1 5 RKPSSEEGKR 10 3 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 RKPS(0.781)S(0.219)EEGKR;RKPS(0.927)S(0.073)EEGKR;RKPS(0.959)S(0.041)EEGKR;RKPS(0.91)S(0.09)EEGKR;RKPS(0.868)S(0.132)EEGKR 131.35 0.00044022 7503210000.0 3409570.0 4304820.0 2145670.0 1734110.0 5821520.0 8050010.0 2545260.0 2749210.0 3149670.0 9468900.0 True False 3220434.355290712 4098009.9855334507 2283983.321393383 1898919.2930208165 6279640.504082171 7999766.9015904125 2802559.7201437857 2739673.6321804365 2577769.3247193713 9385012.912692735 0.34314650232768934 0.43665469868359036 0.24336496312161876 0.20233528826077887 0.6691136775730259 0.8523980708402809 0.2986207633612812 0.291920070613347 0.27466870303748586 1.0 23.16192729936327 -5.756629480021527 24.991748952463077 0.5301551377223088 0.3111802937663821 0.21645614093832888 0.2351071135483007 237.61340299869215 1234606.7896909493 0.07368468621153831 0.09204569422512454 1.7513402139526812e-06 5.756629480021527 -0.2189748439559267 RKPS(ph)VPDSASPADDSFVDPGER ddPTM_KYSE-520_SHP099_60min_R1 7 RKPSVPDSASPADDSFVDPGER 22 2 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 RKPS(0.937)VPDS(0.047)AS(0.013)PADDS(0.003)FVDPGER;RKPS(0.86)VPDS(0.019)AS(0.122)PADDSFVDPGER;RKPS(0.946)VPDS(0.039)AS(0.015)PADDSFVDPGER;RKPS(0.921)VPDS(0.063)AS(0.015)PADDSFVDPGER;RKPS(0.997)VPDS(0.002)AS(0.001)PADDSFVDPGER;RKPS(0.697)VPDS(0.151)AS(0.151)PADDSFVDPGER;RKPS(0.333)VPDS(0.333)AS(0.333)PADDSFVDPGER 144.26 5.5083e-07 21439520000.0 6410730.0 6036700.0 5856190.0 5250370.0 5040930.0 6641110.0 6228460.0 6526550.0 8170210.0 6813650.0 True False 6055114.02742657 5746687.870728573 6233689.377635287 5749363.586218701 5437622.512031726 6599660.369095333 6858093.520711738 6503910.921358217 6686705.818233487 6753286.361939493 0.8966173952806566 0.8509468668641156 0.9230601285867905 0.851343076257102 0.805181687937498 0.9772516690969936 1.0155194305638988 0.9630734686468031 0.9901410157754833 1.0 22.68715830323171 -6.3619020520847 6.847468011258638 0.989754281342678 0.8672789921399233 0.7950159759944653 0.03145349741664961 0.11805153532689558 6.950852264954719 0.011361458469219026 0.009996130134195114 4.3460823179554244e-07 6.3619020520847 -0.12247528920275463 RKPSVPDS(ph)ASPADDSFVDPGER ddPTM_KYSE-520_SHP099_60min_R1 2 RKPSVPDSASPADDSFVDPGER 22 2 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 RKPS(0.083)VPDS(0.682)AS(0.236)PADDSFVDPGER;RKPS(0.29)VPDS(0.355)AS(0.355)PADDS(0.001)FVDPGER 72.801 0.0045043999999999996 981760000.0 940120.0 845870.0 818370.0 686440.0 783020.0 862200.0 799260.0 891090.0 1060440.0 949930.0 True False 887969.6695172426 805233.1355232449 871123.4396382966 751679.051214288 844639.2192256356 856818.689983148 880057.0008258963 887999.0167719685 867890.8275169815 941514.3592343566 0.9431291841787132 0.855253164888599 0.9252364885297106 0.7983723708957096 0.8971071029787584 0.9100431465324826 0.9347249908557553 0.9431603544465248 0.9218030707707464 1.0 19.844623572290892 -6.6357910678509615 1.709578079118194 0.9492838876481842 0.8799723488037791 0.3692804454139079 0.04112970550276604 0.4129065116341504 2.463196814021171 0.020306304165137394 0.01388975914508144 2.3131773552701342e-07 6.6357910678509615 -0.06931153884440511 RKPSVPDSAS(ph)PADDSFVDPGER ddPTM_KYSE-520_SHP099_60min_R1 1 RKPSVPDSASPADDSFVDPGER 22 2 C9K098;C9JVV5;H7C5C7;C9J869;C9JAB9;P16333-2;P16333 C9K098 NCK1 Cytoplasmic protein NCK1 1 RKPS(0.29)VPDS(0.29)AS(0.421)PADDSFVDPGER 134.07 9.403200000000002e-07 1173700000.0 366920.0 323370.0 287130.0 235790.0 255710.0 323100.0 316770.0 308280.0 411880.0 406670.0 True False 346566.21616311406 307834.8198117343 305638.8592242432 258199.41070715166 275832.922209123 321083.4130521401 348792.20297727856 307210.64863309276 337092.9746498567 403067.2201844727 0.8598223790178232 0.7637307238004789 0.7582825988289517 0.6405864773349244 0.6843347918068899 0.7966001623877752 0.8653449983296733 0.7621821702407131 0.8363194965236285 1.0 18.620660933884167 -8.47209880591203 0.5790493783207014 1.0070493658273798 0.7474135113047888 0.5595070676163305 0.06378011817605136 1.3709856694616098 0.836383489620403 0.09369836686781893 0.03130527484067598 3.3721058148216403e-09 8.47209880591203 -0.25963585452259097 RKPVLPALTINPTIAEGPS(ph)PTSEGASEANLVDLQK ddPTM_KYSE-520_SHP099_60min_R1 1 RKPVLPALTINPTIAEGPSPTSEGASEANLVDLQK 35 2 P36507 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 RKPVLPALTINPTIAEGPS(0.317)PT(0.317)S(0.317)EGAS(0.05)EANLVDLQK 70.982 0.009812999999999999 5172500000.0 96686.0 90772.0 88372.0 78486.0 75677.0 105360.0 91382.0 100750.0 142290.0 89221.0 True False 91322.63484123752 86411.17686845027 94068.60052019925 85945.28584232373 81632.34935677052 104702.40915869246 100619.78436237539 100400.52176522666 116453.7228390018 88430.57135288753 1.0327043401858056 0.9771640683358389 1.0637565615720475 0.9718956298422395 0.9231236223840701 1.184006928337839 1.1378393560395088 1.1353598673989374 1.3168943845707632 1.0 16.43225758982822 -6.272333458099099 24.96975599184303 1.1622188104821578 0.9954860509782512 0.501484115124298 0.08012774426277074 576.2258479190947 1320733.790390829 0.02706524563796825 0.024092020829754857 5.341540700503449e-07 6.272333458099099 -0.16673275950390665 RKPVLPALTINPTIAEGPSPT(ph)SEGASEANLVDLQK ddPTM_KYSE-520_SHP099_60min_R1 1 RKPVLPALTINPTIAEGPSPTSEGASEANLVDLQK 35 2 P36507 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 1 RKPVLPALTINPTIAEGPS(0.099)PT(0.448)S(0.448)EGAS(0.005)EANLVDLQK 142.17 1.0357999999999999e-06 5097000000.0 66142.0 63933.0 81025.0 37879.0 70708.0 83916.0 55571.0 83722.0 111190.0 108810.0 True False 62472.97140919181 60861.562714610525 86248.0011445837 41479.00877126337 76272.317326513 83392.24911694034 61188.6590006955 83431.58792286171 91000.69887180152 107846.0280528991 0.5792792978759352 0.5643375450485536 0.799732755130106 0.38461322609783716 0.7072334392241223 0.7732528552283442 0.5673705384001914 0.7736176234690632 0.8438020436614054 1.0 16.718613517751063 -7.86613414520698 0.6976317640807315 1.006914639348667 0.6087674069736282 0.5413942398272753 0.11362030684055985 0.5413722273917451 0.6117538537929677 0.10969573826662794 0.04523375991609413 1.3610242233452589e-08 7.86613414520698 -0.3981472323750388 RKQDEWIK ddPTM_KYSE-520_SHP099_60min_R1 2 RKQDEWIK 8 2 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 0 ; 143.91 0.00036246 4251500000.0 6578100.0 5386400.0 4449200.0 3979200.0 6517000.0 5707700.0 4613800.0 5256600.0 5330300.0 3700500.0 False True 6213199.67988275 5127629.258848765 4736002.550971701 4357381.971609891 7029850.823342265 5672076.12713619 5080207.930348723 5238366.081499666 4362451.88592826 3667716.448945434 1.6940239973210607 1.3980440773503893 1.2912673640115848 1.1880367613648963 1.9166832881433715 1.5464870870176084 1.3851146894982622 1.4282363847962771 1.1894190695091986 1.0 21.80645067785563 -7.902137890500441 1.611520905063571 0.9984456618208644 1.4864519578317685 0.4094020520173298 0.19393860559397338 0.39032718556361845 2.23053574913587 0.19362032236889257 0.05702202261596706 1.2527433599977935e-08 7.902137890500441 0.4880062960109042 RKQEEADRK ddPTM_KYSE-520_SHP099_60min_R1 2 RKQEEADRK 9 3 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;E9PGZ1;C9J813;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 0 ; 146.11 0.00016798 1020900000.0 405490.0 497030.0 168076.0 98282.0 643890.0 1423710.0 358410.0 154288.0 233810.0 1295320.0 False True 382996.6613757249 473151.9327427605 178910.44789110826 107622.69173043927 694560.4797670485 1414824.0977915893 394641.58054451545 153752.81093909006 191355.99787045503 1283844.472543712 0.2983201389003797 0.3685430306096915 0.13935523477904507 0.0838284496541889 0.5410004830187095 1.1020214115097324 0.30739048925653945 0.11975968602680971 0.14904920491756823 1.0 20.292039011441556 -5.776012368978858 24.89315626498811 0.5093418258707979 0.22700277140910877 0.1933235771520122 0.3112373758490831 458.9212499071687 783912.9368728304 0.10363640803170937 0.1180243669850503 1.6748951732835604e-06 5.776012368978858 -0.28233905446168917 RKQEEALR ddPTM_KYSE-520_SHP099_60min_R1 1 RKQEEALR 8 2 I1E4Y6;Q6Y7W6;Q6Y7W6-3;Q6Y7W6-4;Q6Y7W6-5;E7ESB6 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 0 119.75 0.00063246 404270000.0 354380.0 304610.0 243800.0 208380.0 334630.0 291490.0 227590.0 296900.0 302270.0 229610.0 False True 334721.8349609844 289976.07837106823 259515.73809379208 228184.3725482682 360963.4772157474 289670.70278727444 250597.01826435208 295870.1231969808 247385.38760661392 227575.83403387695 1.4708144930324971 1.2741953889880169 1.1403483994489527 1.0026740032261099 1.586123934239935 1.2728535260213703 1.1011582988510467 1.3000946451675426 1.087045945176183 1.0 17.79598784240422 -13.99999999999838 0.11161455851010718 0.15409241745836796 1.3920864621215499 0.23420327482672332 0.16201156931139793 281.4283000676918 2.0767581920215616 53.514116344550786 2.0337510143355604 1.0000000000037302e-14 13.99999999999838 1.2379940446631819 RKQEEDEENKPK ddPTM_KYSE-520_SHP099_60min_R1 1 RKQEEDEENKPK 12 3 Q8IWZ3-6;H0Y4P6;Q8IWZ3;Q8IWZ3-4;E9PDP5 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 0 128.85 3.8603e-05 302190000.0 218900.0 192000.0 120510.0 121110.0 219840.0 240440.0 155310.0 176220.0 191650.0 148470.0 False True 206757.18063366835 182776.0318021245 128278.26742281744 132620.2579869508 237140.15728150436 238939.32477331063 171010.25047953118 175608.7339500573 156851.19110334333 147154.67130791224 1.405033077074675 1.2420674802750686 0.8717240593361997 0.9012303639987815 1.611502748596427 1.6237291188218181 1.1621122792745233 1.1933615996641156 1.065893387612152 1.0 17.166973814647786 -7.7338883822888125 1.9688274496385356 1.0042057120468937 1.255920700005502 0.12779466014807805 0.23784599898862643 0.8093651093420589 5.955095680146865 0.248994348074948 0.07324996512569441 1.845489666200393e-08 7.7338883822888125 0.25171498795860825 RKQEELQQLEQQR ddPTM_KYSE-520_SHP099_60min_R1 4 RKQEELQQLEQQR 13 2 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;; 226.59 6.5572e-12 3851460000.0 2752320.0 2467360.0 2061360.0 1566170.0 2714490.0 2203980.0 1643290.0 1829000.0 2164490.0 1689640.0 False True 2599643.3229861087 2348824.322017133 2194238.563892616 1715018.3259138204 2928104.919664629 2190224.143295127 1809409.7901648856 1822655.6258918103 1771473.1783525979 1674671.1041200277 1.552330673521782 1.4025585777640472 1.3102504476815464 1.0240926243335364 1.7484656613832423 1.3078533079759573 1.0804568047501228 1.088366319456824 1.0578036331996281 1.0 20.675446355613296 -6.707372554331809 4.22156480501157 1.061175112601122 1.3927248026232921 0.4765519536992646 0.17348037018384196 0.20719105970261867 7.566916171485615 0.07203112144721327 0.05302312292949582 1.9616767538815023e-07 6.707372554331809 0.33154969002217016 RKQGGS(ph)PDEPDSK ddPTM_KYSE-520_SHP099_60min_R1 3 RKQGGSPDEPDSK 13 2 V9GZ50;Q9ULX6-2;Q9ULX6 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 RKQGGS(0.786)PDEPDS(0.214)K;RKQGGS(0.981)PDEPDS(0.019)K;RKQGGS(0.999)PDEPDS(0.001)K 119.68 7.8766e-05 862670000.0 1113820.0 1088030.0 976390.0 844779.0 932850.0 879469.0 774852.0 778083.0 1223780.0 829250.0 True False 1052034.1842548784 1035759.4056336747 1039329.6616792349 925066.5421679319 1006259.9878095505 873979.907748539 853181.6019867724 775384.011678937 1001572.4009832996 821903.4901467371 1.279997222139859 1.2601958965386035 1.2645397837326133 1.125517233176339 1.224304312942995 1.0633607451800753 1.0380556990145535 0.9434003152128059 1.2186009829505478 1.0 19.648609473622372 -5.851933566097195 0.8974611275053233 1.0400695259157569 1.2768559990813204 0.5847041304858307 0.0755767775192592 0.41181146791479645 0.723512388375559 0.03831465971694396 0.055753939181253175 1.406262623269336e-06 5.851933566097195 0.23678647316556356 RKQGGSPDEPDS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 RKQGGSPDEPDSK 13 2 V9GZ50;Q9ULX6-2;Q9ULX6 V9GZ50 AKAP8L A-kinase anchor protein 8-like 1 RKQGGS(0.377)PDEPDS(0.623)K;RKQGGS(0.094)PDEPDS(0.906)K 67.415 0.026314999999999998 345000000.0 1103280.0 1110000.0 1063170.0 891500.0 928560.0 920890.0 710880.0 794280.0 1264750.0 783590.0 True False 1042078.8590658476 1056673.9338560314 1131703.639332145 976227.8919607521 1001632.3892163119 915142.3839231989 782742.6879202185 791524.828066346 1035103.2817529524 776648.0022237943 1.3417646811451762 1.360557074543979 1.4571641671538607 1.25697599062316 1.2896864298218942 1.1783232317637466 1.0078474233873944 1.019155171712223 1.3327830352864065 1.0 19.56690135298121 -6.116214950136192 1.475050313597794 1.0920053847534936 1.3717373523028815 0.5948997732158356 0.09963660472435706 0.2813595693333849 1.2372027707730937 0.042494402568506735 0.04319427448576624 7.652177755341773e-07 6.116214950136192 0.2797319675493879 RKRES(ph)ES(ph)ESDET(ph)PPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 1 RKRESESESDETPPAAPQLIK 21 3 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 3 RKRES(0.928)ES(0.572)ES(0.572)DET(0.928)PPAAPQLIK 60.034 0.018344 429620000.0 143470.0 137030.0 137490.0 98893.0 96628.0 107830.0 89683.0 91927.0 156420.0 84691.0 True False 135511.4330996456 130446.8731137768 146352.8253917779 108291.76098673526 104232.07386188689 107156.99297249249 98749.03286173327 91608.1266929231 128018.07102731515 83940.70362860095 1.6143709457002102 1.5540359739053926 1.7435263116130395 1.2900983230480954 1.2417345740043582 1.2765796370568079 1.1764141661076892 1.091343326096562 1.525101238056525 1.0 16.357082936140422 -5.362571205583073 5.0963878781599075 1.2278583789749729 1.6275038997216387 0.6564793184626121 0.13585335363173415 0.13287344643802032 5.313695872982995 0.036931591865763676 0.05562284061887987 4.339391104944041e-06 5.362571205583073 0.3996455207466658 RKRES(ph)ES(ph)ESDETPPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 1 RKRESESESDETPPAAPQLIK 21 3 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 RKRES(0.609)ES(0.672)ES(0.609)DET(0.109)PPAAPQLIK 105.07 0.0013967 879820000.0 487650.0 493450.0 634330.0 314650.0 397900.0 388340.0 269830.0 269510.0 652760.0 369040.0 True False 460599.0823938256 469743.92131644936 675219.9267638858 344554.2413970276 429212.4662586908 385916.2260125913 297107.0496870251 268575.1327141072 534235.2387405082 365770.59270877554 1.2592567351650161 1.2842583047414553 1.8460202657721367 0.941995470016803 1.1734471682922507 1.0550772361294107 0.812277027211917 0.7342720767274619 1.4605746043828713 1.0 18.480579564125282 -5.2962944318392875 24.99417678167759 1.0128334598482422 1.4452866254142576 0.41171498207139734 0.23920290865838234 576.4496298491913 413364.48040514125 0.06740813142525286 0.09998695228722869 5.054818521839036e-06 5.2962944318392875 0.4324531655660153 RKRESESES(ph)DET(ph)PPAAPQLIK ddPTM_KYSE-520_SHP099_60min_R1 1 RKRESESESDETPPAAPQLIK 21 3 O60832 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 2 RKRES(0.16)ES(0.468)ES(0.689)DET(0.682)PPAAPQLIK 69.435 0.041632 458510000.0 532140.0 482020.0 496540.0 361320.0 407370.0 346680.0 334350.0 349180.0 623360.0 398040.0 True False 502621.1334052091 458863.0356732294 528547.7628920901 395659.7441651804 439427.70138176205 344516.24152558314 368149.3609415445 347968.77607922436 510173.53762681974 394513.67527043365 1.2740271501632214 1.1631105952377574 1.3397450988987338 1.0029050169020406 1.1138465633175845 0.8732681859239024 0.9331726224425129 0.8820195544316597 1.2931707304622657 1.0 18.589715784568803 -5.275320019980406 23.847469730736854 1.004060596638368 1.2493759047002357 0.4563384123955797 0.12202344810661674 366.3573750917487 629415.2712344301 0.034072054877020905 0.0508660089870583 5.304933937874416e-06 5.275320019980406 0.24531530806186774 RKRET(ph)DDEGEDD ddPTM_KYSE-520_SHP099_60min_R1 7 RKRETDDEGEDD 12 3 Q92688 Q92688 ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member B 1 RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD;RKRET(1)DDEGEDD 112.8 0.00015048 34381900000.0 2632660.0 2606790.0 1777420.0 1713470.0 2367460.0 2539750.0 1894980.0 1742020.0 2474380.0 2270510.0 True False 2486621.1017223992 2481555.895528441 1891995.3371725504 1876317.673626458 2553765.632995224 2523898.4781775726 2086543.071622576 1735977.339210523 2025094.9660437806 2250395.047830049 1.1049709268246621 1.1027201192614113 0.8407392022111466 0.8337725749244355 1.1348077020777758 1.1215357412962894 0.9271896832667368 0.7714100423765352 0.8998842083288822 1.0 21.101746852329875 -6.991906290754336 24.60585264980084 0.8712482386597694 1.0156835135440894 0.21506381584617518 0.11489329015438818 233.56629676270916 710066.7474078954 0.05204243786774441 0.035015393393755666 1.0188111968089545e-07 6.991906290754336 0.14443527488431995 RKS(ph)CLVK ddPTM_KYSE-520_SHP099_60min_R1 2 RKSCLVK 7 2 Q99661-2;Q99661;Q5JR89;Q5JR91 Q99661-2 KIF2C Kinesin-like protein KIF2C;Kinesin-like protein 1 RKS(1)CLVK;RKS(1)CLVK 110.38 0.002262 3832800000.0 3683400.0 3951100.0 1876720.0 5059900.0 1898280.0 2757700.0 2972400.0 4682000.0 2261000.0 1834620.0 True False 3479074.459324144 3761283.2252779873 1997696.3740581675 5540791.374685588 2047663.8362642592 2740488.171383124 3272879.1998284636 4665759.234787013 1850459.3951717138 1818366.6941127637 1.9132964052785237 2.0684954456412497 1.0986212959828239 3.047125418995374 1.1261006060515073 1.5071152481267214 1.7999005428469974 2.565906673221145 1.0176491909815852 1.0 20.794211733890418 RKS(ph)DDVHLR ddPTM_KYSE-520_SHP099_60min_R1 6 RKSDDVHLR 9 2 A0A0C4DGG3;Q8NHM5-2;Q8NHM5;Q8NHM5-4;Q8NHM5-3 A0A0C4DGG3 KDM2B Lysine-specific demethylase 2B 1 RKS(1)DDVHLR;RKS(1)DDVHLR;RKS(1)DDVHLR;RKS(1)DDVHLR;RKS(1)DDVHLR;RKS(1)DDVHLR 130.1 0.00036074 3366811500.0 1685491.2 1616070.8 1674184.6 1874322.7 1913796.6 1948844.9 2196699.4 2789698.9 2911245.9 1784926.0 True False 1591993.6431925942 1538432.332996275 1782105.218106072 2052457.765872334 2064401.504406882 1936681.4360917918 2418763.2130721523 2780022.085636515 2382637.0310969204 1769112.9442914147 0.8998824231825615 0.8696066228900188 1.0073439481953828 1.1601620871608103 1.1669133455092884 1.0947189337690892 1.3672180856948866 1.5714214825046127 1.3467975794226306 1.0 20.75459472530486 -5.53011208049848 0.7394141790904192 1.343017520123478 0.8450173386949374 0.5143094403497881 0.1479954454470801 0.6375385233127192 0.6959687468889083 0.08294753613948641 0.2002880277987636 2.950447691955277e-06 5.53011208049848 -0.4980001814285405 RKS(ph)DFIPYR ddPTM_KYSE-520_SHP099_60min_R1 1 RKSDFIPYR 9 2 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 RKS(0.999)DFIPY(0.001)R 73.46600000000001 0.016280000000000003 0.0 709230.0 773420.0 595340.0 491370.0 664420.0 612100.0 584790.0 662610.0 805110.0 527200.0 True False 669887.5980850462 736263.7422729116 633716.5689776797 538069.6570642228 716706.0739673272 608279.6568530333 643906.2802004062 660311.5605643363 658922.319171472 522529.41815539286 1.2820093468609859 1.4090378774692398 1.2127863943331538 1.0297404095709852 1.3716090406879045 1.1641060497614693 1.2322871360496637 1.2636830341444412 1.2610243486339323 1.0 18.99515273695504 -11.078820643975941 2.4785563615055555 0.6143129873333816 1.245944143537332 0.3574503115106076 0.09947939039960489 6423305.37164204 1751046.7264876955 14036949.351442903 0.025641650149298263 8.340255514694255e-12 11.078820643975941 0.6316311562039504 RKS(ph)DGIYIINLK ddPTM_KYSE-520_SHP099_60min_R1 2 RKSDGIYIINLK 12 2 C9J9K3;A0A0C4DG17;P08865;F8WD59 C9J9K3 RPSA 40S ribosomal protein SA 1 RKS(1)DGIYIINLK;RKS(1)DGIYIINLK 172.42 1.3953e-06 1703820000.0 1729620.0 1912530.0 1560640.0 1455630.0 1331110.0 1375310.0 1376460.0 1588370.0 1892930.0 1289850.0 True False 1633674.5306880123 1820649.188033944 1661241.3515122898 1593972.6375488827 1435860.7840201233 1366726.1801446588 1515606.0097550394 1582860.3151983444 1549221.6288820866 1278422.9324881143 1.277882685903087 1.424136834349904 1.2994458322795572 1.2468273190677468 1.1231500527181546 1.0690720147554655 1.1855278650276637 1.2381351076968892 1.2118224646259543 1.0 20.285933762153686 -5.416761905759774 2.3101855234285065 1.1495659264098799 1.3482627887948373 0.5807220555881882 0.07457955420102641 0.22752334264316584 2.3803901369977516 0.023426534278815025 0.03848245997122524 3.8303467772769435e-06 5.416761905759774 0.19869686238495743 RKS(ph)EASSEFAK ddPTM_KYSE-520_SHP099_60min_R1 2 RKSEASSEFAK 11 2 Q92620 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 1 RKS(0.921)EAS(0.068)S(0.012)EFAK;RKS(0.997)EAS(0.003)SEFAK 103.6 0.00085042 1011660000.0 437300.0 399250.0 378900.0 425200.0 441880.0 322550.0 322990.0 425920.0 536920.0 413740.0 True False 413042.0972640619 380069.4307135324 403324.5002614349 465610.8801589589 476653.44204672123 320536.84580615273 355640.9812786282 424442.5829304754 439428.8626517454 410074.58548484906 1.007236517170905 0.9268300064588487 0.9835393719524625 1.1354297404420877 1.1623579195554221 0.7816549894872613 0.8672592593323929 1.0350375223293549 1.0715827759288947 1.0 18.64552680934523 -6.243677131421281 24.945354592510864 0.9480562489403439 1.0384433021668038 0.17215831209312094 0.10047252712501824 1715.587051300161 2409376.8266432607 0.03688008234951684 0.03680462146699829 5.705883084621847e-07 6.243677131421281 0.0903870532264599 RKS(ph)EDGTPAEDGTPAATGGSQPPSMGR ddPTM_KYSE-520_SHP099_60min_R1 1 RKSEDGTPAEDGTPAATGGSQPPSMGR 27 2 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 RKS(0.763)EDGT(0.236)PAEDGT(0.001)PAATGGSQPPSMGR 137.91 1.8388999999999999e-06 764750000.0 456040.0 381020.0 420330.0 353840.0 422830.0 416750.0 351550.0 450730.0 472840.0 411560.0 True False 430742.5521067987 362715.22727732 447425.14435177844 387468.84721412434 456104.31542639446 414148.9086644364 387088.10479736736 449166.5228311733 386984.1753264012 407913.8985888345 1.0559643924782636 0.8891955594847886 1.096861729643515 0.9498790027860311 1.1181386979072623 1.0152851131014946 0.9489456136123007 1.10113071504808 0.9486908307492364 1.0 18.637905138428202 -4.768614206795278 24.99991872593117 1.0239347803649932 0.9725799734765689 0.0712042550651677 0.07174597295963821 380.0585556258275 1324289.516615664 0.01733288412273294 0.03732556662398576 1.7036712445031146e-05 4.768614206795278 -0.05135480688842431 RKS(ph)ELEFETLK ddPTM_KYSE-520_SHP099_60min_R1 5 RKSELEFETLK 11 2 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 RKS(1)ELEFETLK;RKS(1)ELEFETLK;RKS(1)ELEFETLK;RKS(1)ELEFETLK;RKS(1)ELEFETLK 188.25 5.6571e-07 2435150000.0 3725830.0 3101360.0 2810820.0 3056340.0 3540180.0 3619450.0 3345390.0 3821050.0 4084100.0 3526730.0 True False 3519150.7826420353 2952366.0103637367 2992009.95467101 3346813.634677869 3818772.0251311683 3596859.6699831933 3683574.6690600645 3807795.6693897774 3342530.3917827527 3495485.9159544217 1.0067701221680225 0.8446224877886858 0.8559639565459555 0.9574673493610805 1.0924867434599506 1.0290013338534914 1.0538090433284684 1.0893465918457523 0.9562419852777735 1.0 21.737061591394024 -5.551339935072868 5.315534563727533 1.0412426043059755 0.8976338932459155 0.5459359388294533 0.05541308955836309 0.12280860582995623 9.455679330904953 0.01601161292459539 0.021376199021029017 2.809700734013315e-06 5.551339935072868 -0.14360871106006 RKS(ph)ELFNPVSLDCK ddPTM_KYSE-520_SHP099_60min_R1 3 RKSELFNPVSLDCK 14 2 H8Y6P7;P0CAP2-3;P0CAP2 H8Y6P7 GCOM1;POLR2M DNA-directed RNA polymerase II subunit GRINL1A 1 RKS(1)ELFNPVSLDCK;RKS(1)ELFNPVSLDCK;RKS(1)ELFNPVSLDCK 175.59 1.0759e-08 2863100000.0 2970170.0 2839330.0 2998020.0 2846240.0 2971400.0 3041270.0 2794830.0 3154250.0 3666320.0 3326530.0 True False 2805408.7492128992 2702924.3248787825 3191277.1662016064 3116745.793846737 3205232.2750466806 3022288.3058281704 3077358.6913122637 3143308.6429574806 3000608.7084060013 3297059.532201175 0.8508820425635321 0.8197984593484918 0.9679161492334515 0.9453107423164855 0.9721487415505692 0.9166617333750227 0.9333646120905087 0.9533672693070702 0.9100862993525453 1.0 21.652748506085587 -4.759782371024419 24.999987568480062 0.9470507097675389 0.8353402182576473 0.7527274691584165 0.02621469364749508 18.758826965246747 282998.5950278859 0.006442774666089721 0.015310371562689695 1.7386718750196502e-05 4.759782371024419 -0.11171049150989165 RKS(ph)ELPQDPHTK ddPTM_KYSE-520_SHP099_60min_R1 6 RKSELPQDPHTK 12 2 H0YJ75;Q13362-3;Q13362;Q13362-4;Q13362-5 H0YJ75 PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform 1 RKS(1)ELPQDPHTK;RKS(1)ELPQDPHTK;RKS(1)ELPQDPHTK;RKS(1)ELPQDPHTK;RKS(1)ELPQDPHTK;RKS(1)ELPQDPHTK 141.0 2.1463e-05 11086290000.0 11370680.0 9830030.0 10698170.0 10458770.0 10213680.0 8894640.0 11490560.0 11187450.0 11709700.0 9704870.0 True False 10739925.713511378 9357780.603624163 11387791.155877225 11452768.356256142 11017438.50811026 8839125.252460811 12652137.941858731 11148643.347120456 9583513.657515366 9618892.402074615 1.1165449476485438 0.9728542759877287 1.1838983824604477 1.1906535469495423 1.1453957532297592 0.9189337901892299 1.3153424960996447 1.1590360803615916 0.9963219523537223 1.0 23.197439349179174 -9.088518239303617 13.40159587569394 0.9999934596017503 1.1142075882681934 0.08017374295865276 0.1123180481644482 0.0 0.0 0.1081343040984627 0.02622642103238956 8.156085328544842e-10 9.088518239303617 0.1142141286664431 RKS(ph)ELPQDPHTKK ddPTM_KYSE-520_SHP099_60min_R1 1 RKSELPQDPHTKK 13 3 H0YJ75;Q13362-3;Q13362;Q13362-4;Q13362-5 H0YJ75 PPP2R5C Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform 1 RKS(1)ELPQDPHTKK 86.367 0.0020196999999999997 1073100000.0 1501200.0 1382300.0 1609200.0 1306700.0 1437700.0 1266100.0 1226500.0 1352100.0 1722900.0 1141800.0 True False 1417925.443431994 1315892.2331254 1712931.6068110361 1430888.3751263185 1550838.810605983 1258197.8002640507 1350486.5894864774 1347409.880682512 1410064.7907745892 1131684.5403069584 1.252933474771508 1.1627730045410687 1.5136122707361719 1.2643880199496267 1.3703808396864139 1.1117919839417236 1.1933419087974562 1.1906232105256471 1.245987499654385 1.0 20.110040428942167 -6.262866332477471 24.997736140730943 1.1630749314429984 1.3129464523921648 0.3772340147370905 0.10480930197321536 158.30896090567072 2773284.009133098 0.03560885179424261 0.03314247016378816 5.459258607590233e-07 6.262866332477471 0.14987152094916634 RKS(ph)ELPQDVYTIK ddPTM_KYSE-520_SHP099_60min_R1 4 RKSELPQDVYTIK 13 2 E9PFR3;Q14738;H0Y8C4;Q14738-2;Q14738-3 E9PFR3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform 1 RKS(1)ELPQDVYTIK;RKS(1)ELPQDVYTIK;RKS(1)ELPQDVYTIK;RKS(1)ELPQDVYTIK 212.76 2.5662e-11 6992940000.0 5697500.0 4977550.0 5457180.0 4808230.0 4430520.0 3933080.0 5186770.0 5330750.0 5767040.0 5418550.0 True False 5381448.317315335 4738421.026545129 5808958.554596727 5265202.733552937 4779176.717789536 3908532.188818054 5711099.329597052 5312258.872456403 4719890.911247716 5370545.862568104 1.002030045925726 0.882297842305232 1.0816327992065562 0.9803850238484337 0.8898865851048176 0.7277718669269608 1.063411332058917 0.9891469151175206 0.8788475197921026 1.0 22.356637300588346 -5.683052583635451 8.042689227014638 0.9214637728539231 0.9864252607898218 0.09052278462549812 0.09560239681085062 0.6871243649453672 61.80495618294885 0.029355132618309625 0.037877826677897485 2.0746623056721386e-06 5.683052583635451 0.06496148793589873 RKS(ph)EPAVGPPR ddPTM_KYSE-520_SHP099_60min_R1 2 RKSEPAVGPPR 11 2 O94875-11;H7BZX1;H7BZK1;H7C1R7;H7BXR3;O94875;O94875-7;O94875-10;O94875-12;O94875-9;O94875-2;O94875-8;O94875-5;O94875-3;O94875-4 O94875-11 SORBS2 Sorbin and SH3 domain-containing protein 2 1 RKS(1)EPAVGPPR;RKS(1)EPAVGPPR 119.62 0.00017614 3108500000.0 2601800.0 2190450.0 2134400.0 1954130.0 2060840.0 2302200.0 1947130.0 1999360.0 2429700.0 2167560.0 True False 2457472.9674402843 2085217.494067518 2271986.8391607446 2139849.927669391 2223016.38342438 2287831.1158422716 2143964.902557525 1992424.686814134 1988527.727752638 2148357.1047361605 1.1438847675848036 0.9706102814427602 1.057546175238761 0.9960401475862579 1.0347518010500345 1.0649212418171232 0.9979555530274958 0.9274178312449706 0.925603906058648 1.0 21.03480239058571 -7.034450455504788 4.217276926964577 0.9461354314223612 1.039038053484599 0.43852598035326884 0.04722097410434148 0.1953193731214459 7.745515608898785 0.021471673345304625 0.012580221728711406 9.237395630026569e-08 7.034450455504788 0.09290262206223787 RKS(ph)EPTIK ddPTM_KYSE-520_SHP099_60min_R1 2 RKSEPTIK 8 2 E7EV07;A0A1B0GW00;H0Y451 E7EV07 ARHGEF4 1 RKS(0.993)EPT(0.007)IK;RKS(0.994)EPT(0.006)IK 108.7 0.00093543 1237830000.0 1874660.0 1782040.0 1659990.0 1604560.0 1570100.0 1532920.0 1574770.0 1662740.0 1923930.0 1658480.0 True False 1770668.8727579394 1696428.1235034284 1766995.6114779098 1757056.8999714442 1693657.9373530322 1523352.4776721976 1733963.1198741305 1656972.3430264348 1574592.810328491 1643787.1574779144 1.0771886522551384 1.0320241983799665 1.0749540191012539 1.068907791363525 1.0303389521254291 0.9267334099443255 1.0548586609805215 1.0080212243346338 0.9579055312394646 1.0 20.648592075928796 -6.006562996690808 15.544620715739168 0.9923613822147639 1.060342784557624 0.5215679815969325 0.03328107387318041 1.8926668131360587 4484.331273523728 0.010480217184366739 0.011335497719116893 9.85001752774018e-07 6.006562996690808 0.06798140234286021 RKS(ph)FDASDTLALPR ddPTM_KYSE-520_SHP099_60min_R1 2 RKSFDASDTLALPR 14 2 Q5JXC2 Q5JXC2 MIIP Migration and invasion-inhibitory protein 1 RKS(0.999)FDAS(0.001)DTLALPR;RKS(0.999)FDAS(0.001)DTLALPR 136.04 5.5055999999999994e-06 650700000.0 535520.0 560360.0 494630.0 403140.0 511150.0 510560.0 373420.0 390830.0 650960.0 492610.0 True False 505813.638067346 533439.464482492 526514.6412359818 441454.30439153966 551374.5969543352 507373.4056573844 411168.93782799924 389474.3019504079 532762.0733662002 488245.8586447807 1.035981420244563 1.0925632138758017 1.0783801478571133 0.9041639505491764 1.1292970276998977 1.0391760558209258 0.8421350238776769 0.7977011889695653 1.0911758163089857 1.0 18.897248281502332 -6.684423053224999 8.82136028877816 0.9160984334335699 1.0478780984040559 0.25522389622042885 0.0935836746004615 0.35410664873017095 36.74812636783132 0.035444443192590915 0.027389522616913277 2.0681257727404755e-07 6.684423053224999 0.131779664970486 RKS(ph)GETDHQQFPR ddPTM_KYSE-520_SHP099_60min_R1 5 RKSGETDHQQFPR 13 2 E7ESJ3;Q9UPS8;Q9UPS8-2 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 RKS(0.869)GET(0.131)DHQQFPR;RKS(0.958)GET(0.042)DHQQFPR;RKS(0.5)GET(0.5)DHQQFPR;RKS(0.829)GET(0.171)DHQQFPR;RKS(0.5)GET(0.5)DHQQFPR 166.92 5.0293e-07 3741470000.0 2608920.0 2487240.0 4500240.0 2306460.0 2305320.0 2999170.0 2250040.0 1968320.0 2764490.0 2278760.0 True False 2464198.0068469164 2367749.256976644 4790332.6710385885 2525665.264937512 2486735.568523461 2980451.0675443755 2477496.00147424 1961492.357329343 2262528.3031217423 2258571.9592484543 1.0910425044269498 1.0483390831454928 2.1209564085053922 1.1182576028163982 1.1010211821415372 1.3196174934077054 1.0969302932011222 0.8684657353056109 1.0017517014930994 1.0 21.106979448827772 -6.692636410843544 1.0452171323907946 0.940244435473925 1.3484033665117667 0.20863376727572536 0.2961409755576908 0.853526551516796 1.8703361607257956 0.21389734443251765 0.12913856865811393 2.029380996093235e-07 6.692636410843544 0.40815893103784173 RKS(ph)GGNEVSIEER ddPTM_KYSE-520_SHP099_60min_R1 5 RKSGGNEVSIEER 13 2 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 RKS(0.999)GGNEVS(0.001)IEER;RKS(1)GGNEVSIEER;RKS(1)GGNEVSIEER;RKS(0.97)GGNEVS(0.03)IEER;RKS(1)GGNEVSIEER 204.71 2.6475e-09 5675200000.0 4671140.0 4628560.0 4352320.0 3983360.0 4011090.0 3802600.0 3719670.0 3862950.0 5091410.0 3993400.0 True False 4412022.552513266 4406197.029989799 4632877.511158216 4361937.336759146 4326739.963019791 3778866.562897147 4095690.5440808595 3849550.3280693046 4166938.2880014214 3958021.582818188 1.1147040156794246 1.1132321888079502 1.1705033472453976 1.1020499119293237 1.093157243457745 0.9547362195550538 1.0347822664384383 0.9725945772454203 1.0527831141927428 1.0 21.916348048647414 -6.080202407047724 4.231786353662161 1.0035134675059103 1.1251280185395436 0.7775335111238518 0.03125306544960544 0.10235892504307802 3.3775374934802858 0.010126217203682217 0.01033899772192832 8.313762100565692e-07 6.080202407047724 0.12161455103363328 RKS(ph)HEAEVLK ddPTM_KYSE-520_SHP099_60min_R1 21 RKSHEAEVLK 10 2 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK;RKS(1)HEAEVLK 202.25 7.712e-07 370330910000.0 137403710.0 127280230.0 130759290.0 140556860.0 127881410.0 129358070.0 133112070.0 129750840.0 151084380.0 102134370.0 True False 129781652.29879493 121165496.6992799 139188243.0556612 153915341.7144391 137944949.421309 128550698.3021902 146568337.0842116 129300764.62011367 123651265.1192806 101229538.94113752 1.2820531798950479 1.1969381463817064 1.3749765583403055 1.5204587843073856 1.3626946330509375 1.2698931522047063 1.4478811087881913 1.277302711961366 1.2214939079311697 1.0 26.593055091281567 -8.090814518622821 1.6059637373531983 1.0015476042191005 1.3495470034561918 0.5941831177439304 0.08742448752641625 0.3673569693750394 2.0477817790573205 0.08989540730122288 0.026041668171055594 8.113074824700608e-09 8.090814518622821 0.34799939923709133 RKS(ph)LS(ph)DS(ph)ESDDSK ddPTM_KYSE-520_SHP099_60min_R1 6 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 3 RKS(1)LS(0.992)DS(0.805)ES(0.202)DDS(0.001)K;RKS(1)LS(0.997)DS(0.654)ES(0.025)DDS(0.325)K;RKS(1)LS(0.989)DS(0.506)ES(0.506)DDSK;RKS(0.989)LS(0.979)DS(0.825)ES(0.202)DDS(0.005)K;RKS(1)LS(0.912)DS(0.544)ES(0.544)DDSK;RKS(1)LS(0.995)DS(0.977)ES(0.028)DDSK 115.63 7.6146e-05 7651500000.0 14886850.0 13304680.0 12789370.0 13396630.0 12464780.0 13422080.0 12892070.0 13582510.0 16768100.0 13134590.0 True False 14061046.754300278 12665503.202068174 13613793.253915528 14669841.68735632 13445687.271103304 13338307.820052205 14195326.25007823 13535395.442991652 13723435.729402404 13018227.751156405 1.0801045290555191 0.9729053327510807 1.0457485853023443 1.126869337959862 1.0328354617938627 1.0245870693779626 1.0904192583984609 1.0397264283373218 1.0541708127808223 1.0 23.634029723418067 -4.986191738636452 24.982427412845922 1.0563850525098673 1.022210436680612 0.052104921440889185 0.04115393369887238 521.2870049419715 943117.9898738202 0.010352677134372006 0.021533753033947375 1.032305547890824e-05 4.986191738636452 -0.034174615829255295 RKS(ph)LS(ph)DSES(ph)DDSK ddPTM_KYSE-520_SHP099_60min_R1 1 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 3 RKS(0.999)LS(0.99)DS(0.261)ES(0.727)DDS(0.023)K 50.831 0.045805 1835500000.0 1945900.0 1671800.0 1675800.0 1644200.0 1598100.0 1706500.0 1693400.0 1718800.0 2143500.0 1657100.0 True False 1837957.0479445215 1591484.2185770394 1783824.7493748043 1800464.2736532425 1723861.3780548237 1695849.100505967 1864585.3979913574 1712837.8839709377 1754294.4332377599 1642419.3832042916 1.1190546499510643 0.9689877231429893 1.0860957728680947 1.0962268785093197 1.0495866011345056 1.0325311049346215 1.1352675309722837 1.0428748597871893 1.0681160068966093 1.0 20.64739112811792 RKS(ph)LS(ph)DSESDDS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 3 RKS(1)LS(0.999)DS(0.001)ESDDS(1)K 197.1 4.1472000000000004e-11 362740000.0 2109800.0 1834800.0 1777400.0 1826300.0 1858200.0 1883800.0 1732200.0 1928500.0 2239000.0 1923000.0 True False 1992765.188217973 1746653.4539090532 1891974.047940549 1999871.002902885 2004429.7682882652 1872042.5054398722 1907307.680642869 1921810.4836152836 1832454.0405968472 1905963.7160713617 1.045542038085347 0.9164148504932275 0.9926600553762647 1.0492702384833894 1.0516620811753254 0.9822025937086519 1.0007051364935098 1.0083143070407372 0.9614317550461898 1.0 20.862089224174248 -4.998506364144414 24.992143628509314 1.0094451077712006 0.9743682041315922 0.06662332839991914 0.03873878185831043 104.552739598474 1749263.1748363764 0.010044123134539522 0.02069390355545705 1.003445144570948e-05 4.998506364144414 -0.03507690363960836 RKS(ph)LS(ph)DSESDDSK ddPTM_KYSE-520_SHP099_60min_R1 2 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 RKS(0.968)LS(0.957)DS(0.073)ES(0.002)DDSK;RKS(0.999)LS(0.452)DS(0.271)ES(0.271)DDS(0.007)K 103.71 0.00072869 19046070000.0 9194100.0 8348700.0 8961400.0 8941200.0 8758500.0 8566100.0 8081600.0 8543300.0 10555900.0 8000500.0 True False 8684084.945016043 7947615.920345814 9539066.182746965 9790968.959730187 9447744.12095186 8512635.792466545 8898566.996815255 8513665.286321202 8639214.652584301 7929621.794294817 1.09514490984476 1.002269228787676 1.2029660972746654 1.2347334102081093 1.1914495250894936 1.073523556771799 1.1221931168542707 1.0736533856440154 1.0894863433209412 1.0 22.918820627118848 -7.909280399354134 0.786067051859058 1.0038933384358888 1.137971738373953 0.28439828226730446 0.06440294803309826 0.9444606405026083 1.334838633750571 0.06920995392178736 0.026351212205943525 1.2323089442231062e-08 7.909280399354134 0.13407839993806414 RKS(ph)LSDS(ph)ESDDSK ddPTM_KYSE-520_SHP099_60min_R1 5 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 RKS(0.576)LS(0.576)DS(0.847)ES(0.001)DDSK;RKS(0.999)LS(0.067)DS(0.899)ES(0.034)DDS(0.001)K;RKS(0.975)LS(0.058)DS(0.77)ES(0.197)DDSK;RKS(0.999)LS(0.219)DS(0.656)ES(0.095)DDS(0.03)K;RKS(0.863)LS(0.216)DS(0.868)ES(0.052)DDS(0.001)K 115.7 0.0011359000000000002 23716850000.0 48714600.0 43962200.0 41101600.0 38930900.0 39630800.0 40210200.0 37511600.0 39669200.0 46310100.0 40495600.0 True False 46012304.02785248 41850189.92339251 43751074.900885195 42630881.03099811 42749518.49159318 39959233.22658363 41303638.60593637 39531596.80406084 37901353.222619005 40136840.48910003 1.1463858008541568 1.042687700711215 1.0900478056504392 1.0621384371940135 1.0650942617967818 0.995574956564789 1.0290705023768179 0.9849204950448563 0.9443033572339079 1.0 25.258423718627313 -6.18338493764297 0.6391132291585794 0.9715010472518248 1.1016143810544408 0.7142116489932911 0.029608950740488953 0.43344311147336206 0.38996822490176175 0.022072535176938052 0.025749930190303208 6.555639485088802e-07 6.18338493764297 0.13011333380261592 RKS(ph)LSDSES(ph)DDSK ddPTM_KYSE-520_SHP099_60min_R1 1 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 RKS(0.961)LS(0.303)DS(0.152)ES(0.576)DDS(0.007)K 84.10700000000001 0.0035459000000000003 4811400000.0 5248500.0 4712800.0 4598100.0 4685700.0 4838200.0 4971300.0 4615500.0 4876600.0 6076700.0 4915200.0 True False 4957355.242374643 4486390.013942978 4894500.8832201185 5131027.519192921 5218938.814407639 4940272.272689902 5082079.782939133 4859684.212807001 4973324.461141069 4871655.151967737 1.0175915757034424 0.9209169930944016 1.0046895214336249 1.0532411180870263 1.0712865856893892 1.014084970832644 1.0431936630174659 0.9975427367522307 1.0208695619870112 1.0 22.215980582668145 -4.993497401826965 24.970981627655455 1.0301805598117544 0.9676415078783392 0.37188062520360055 0.030644545148678412 151.91006821166016 583345.5362894981 0.007831907656193604 0.016242006278789262 1.0150854393178847e-05 4.993497401826965 -0.06253905193341514 RKS(ph)LSDSESDDS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 5 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 RKS(0.614)LS(0.386)DS(0.001)ES(0.001)DDS(0.997)K;RKS(0.851)LS(0.449)DS(0.291)ES(0.004)DDS(0.405)K;RKS(0.774)LS(0.197)DS(0.03)ES(0.002)DDS(0.997)K;RKS(1)LS(0.001)DS(0.046)ES(0.017)DDS(0.936)K;RKS(0.98)LS(0.02)DS(0.001)ES(0.009)DDS(0.99)K 254.8 1.6153e-24 35008780000.0 32957200.0 28596900.0 28071900.0 27807100.0 27283700.0 27004600.0 27551300.0 27702200.0 34515800.0 27098350.0 True False 31128998.41745059 27223061.999178022 29881459.590628043 30449878.42349056 29430771.96698232 26836054.27455221 30336454.278776012 27606107.5339421 28248600.792511243 26858279.70119728 1.1590093916574609 1.0135817446999213 1.112560444044225 1.1337240792132035 1.0957802321818237 0.9991724925463458 1.1295010185415442 1.0278434747520886 1.0517650834968402 1.0 24.678863565922804 -7.728683125275139 0.3686274124383704 0.9937586151870966 1.1047737839130498 0.28948668607721306 0.048536677622676605 1.7844534038670303 0.7357078079459995 0.07425950450493501 0.050408184417000214 1.8677419562632374e-08 7.728683125275139 0.11101516872595318 RKS(ph)LSDSESDDSK ddPTM_KYSE-520_SHP099_60min_R1 11 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 RKS(0.987)LS(0.012)DSESDDSK;RKS(1)LSDSESDDSK;RKS(0.947)LS(0.053)DSESDDSK;RKS(0.978)LS(0.022)DSESDDSK;RKS(0.995)LS(0.005)DSESDDSK;RKS(0.998)LS(0.002)DSESDDSK;RKS(0.987)LS(0.013)DSESDDSK;RKS(0.876)LS(0.112)DS(0.012)ESDDSK;RKS(0.987)LS(0.011)DS(0.001)ESDDSK;RKS(0.969)LS(0.03)DSESDDSK;RKS(0.967)LS(0.033)DSESDDSK 278.15 4.4671999999999997e-23 50856990000.0 37870530.0 34830170.0 34981030.0 31103100.0 32588120.0 34713260.0 33975290.0 36631250.0 45326790.0 31917330.0 True False 35769776.20787006 33156876.352048956 37235963.165426895 34059129.27251199 35152619.64296101 34496601.668109976 37409843.8800767 36504184.743548006 37096587.53139113 31634567.287506953 1.130718049113198 1.0481216970887157 1.1770656708218048 1.076642805415029 1.1112091189198405 1.090471741073357 1.1825622124077704 1.15393343021841 1.1726598690047902 1.0 24.91499852633781 -6.723900931173737 24.999968392013326 1.1401168568981295 1.1052602941462502 0.013779951997515139 0.05729421993384029 436.92745785285183 290985.02102728165 0.020434200171589006 0.015827996818470084 1.888422076240547e-07 6.723900931173737 -0.034856562751879316 RKS(ph)LVGTPYWMAPELISR ddPTM_KYSE-520_SHP099_60min_R1 3 RKSLVGTPYWMAPELISR 18 2 O96013;O96013-4;O96013-2;O96013-3;M0R1R1 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RKS(0.594)LVGT(0.401)PY(0.005)WMAPELISR;RKS(0.602)LVGT(0.383)PY(0.014)WMAPELISR;RKS(1)LVGTPYWMAPELISR 183.99 1.7768e-12 1394490000.0 657830.0 936240.0 947430.0 720230.0 804750.0 695740.0 539780.0 546210.0 1110500.0 565140.0 True False 621338.8585484058 891261.6250751086 1008502.8537415976 788680.4426549545 868079.2465988481 691397.6285883505 594346.2301451372 544315.324996373 908861.1934268863 560133.2992722669 1.109269631631717 1.5911598653981978 1.8004693794349644 1.408022775435096 1.5497726125668103 1.2343448059357014 1.0610799802784805 0.971760339375565 1.62258018690853 1.0 19.09541067181145 -6.3524079010442716 4.253952595194847 1.1603862766987456 1.5099198970862289 0.3100297843627682 0.2344606720779917 0.27908225636900763 9.010768979712317 0.08488033869693494 0.074588221368491 4.442138538918543e-07 6.3524079010442716 0.34953362038748326 RKS(ph)NEMITNLGK ddPTM_KYSE-520_SHP099_60min_R1 2 RKSNEMITNLGK 12 2 Q7Z2T5 Q7Z2T5 TRMT1L TRMT1-like protein 1 RKS(1)NEMITNLGK;RKS(1)NEMITNLGK 139.49 2.8019e-05 1526620000.0 613240.0 640280.0 559820.0 590390.0 623010.0 631330.0 501280.0 631120.0 787560.0 673970.0 True False 579222.3547363679 609519.9877201272 595906.8929436697 646500.4880927742 672037.3425579981 627389.6352900274 551954.2744213465 628930.7920245151 644558.9567719745 667999.1501407253 0.8671004366013714 0.9124562323046691 0.8920773219818197 0.9678163332342233 1.00604520592043 0.9392072357545023 0.8262799051541727 0.9415143595497393 0.9649098455232873 1.0 19.34948674167425 -5.079204667710747 0.010944302712235328 1.829791787553018 7.874374656443184e-06 0.2194338297826547 0.04837401915639368 7812.9329733442355 17.830040310623207 1403.534113356021 1579.829411090791 8.332883925682152e-06 5.079204667710747 -1.8297839131783615 RKS(ph)PENTEGK ddPTM_KYSE-520_SHP099_60min_R1 9 RKSPENTEGK 10 2 Q15651;A0A087WZE9;Q15651-2 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 RKS(1)PENTEGK;RKS(1)PENTEGK;RKS(0.987)PENT(0.013)EGK;RKS(1)PENTEGK;RKS(0.992)PENT(0.008)EGK;RKS(1)PENTEGK;RKS(1)PENTEGK;RKS(0.987)PENT(0.013)EGK;RKS(0.996)PENT(0.004)EGK 171.36 3.1703000000000005e-05 10647360000.0 4230270.0 6750300.0 3281540.0 3155670.0 5405840.0 5721860.0 4991260.0 3810280.0 4258620.0 24976000.0 True False 3995608.490265826 6426005.455593138 3493073.3190496447 3455583.9280132223 5831248.8529778365 5686147.7493238 5495825.270803332 3797063.0280060386 3485361.95907394 24754732.071033992 0.16140786653640124 0.25958695239171403 0.14110729653733395 0.13959286321893463 0.23556097623052433 0.22969942607366273 0.2220110989298126 0.15338736113605764 0.1407957859964977 1.0 24.56120099881226 -10.937506815507932 2.8410994709808115 1.5387372991557646 0.18912926005021236 0.9690624213941657 0.04357682025872513 9103783.854578461 5218990.081345516 32482099.71292279 0.011181563949449299 1.154763862506588e-11 10.937506815507932 -1.3496080391055523 RKS(ph)PENTEGKDGSK ddPTM_KYSE-520_SHP099_60min_R1 3 RKSPENTEGKDGSK 14 3 Q15651;A0A087WZE9;Q15651-2 Q15651 HMGN3 High mobility group nucleosome-binding domain-containing protein 3 1 RKS(0.883)PENT(0.116)EGKDGS(0.001)K;RKS(0.997)PENT(0.003)EGKDGSK;RKS(0.981)PENT(0.019)EGKDGSK 131.45 3.3556e-05 3934800000.0 2964250.0 4313600.0 2237020.0 1384330.0 3458720.0 3734370.0 1240460.0 1463240.0 3602290.0 4406090.0 True False 2799817.1434141225 4106368.1811543996 2381221.8885585535 1515896.3069860104 3730901.5865751705 3711062.4116357868 1365857.8025229496 1458164.3619627832 2948204.9423410515 4367055.470486145 0.6411224135658722 0.9403059358660436 0.545269439477368 0.34712091871305206 0.8543288748653891 0.849785956857257 0.31276401496473344 0.33390103968623486 0.6751013268015243 1.0 22.058229425719883 -6.749722742415088 24.993145178005175 0.52493329935219 0.691855675729007 0.03267280304454179 0.24201623402974243 556.3771437599597 1186827.8171191625 0.09399002546353837 0.07218799246401823 1.779415042402837e-07 6.749722742415088 0.16692237637681695 RKS(ph)PFGSTER ddPTM_KYSE-520_SHP099_60min_R1 2 RKSPFGSTER 10 2 Q68DK7;J3KSZ8;Q68DK7-2;J3KTC2;Q68DK7-3;J3QQY0 Q68DK7;J3QQY0 MSL1 Male-specific lethal 1 homolog 1 RKS(0.851)PFGS(0.129)T(0.021)ER;RKS(0.986)PFGS(0.01)T(0.004)ER 59.225 0.031166000000000003 615990000.0 902440.0 775130.0 813400.0 775410.0 880120.0 752910.0 811860.0 795940.0 961590.0 748100.0 True False 852379.8542304608 737891.5913061504 865833.0654860158 849104.7332644819 949380.43680221 748210.8094122164 893930.7317900456 793179.0699137928 786989.4957112647 741472.4160129925 1.1495772948828415 0.9951706568855296 1.1677212082166575 1.1451602445715303 1.280398860833111 1.0090878544551358 1.205615627074631 1.0697351011098089 1.0613874214539554 1.0 19.50003349749908 -7.7922873994533735 1.7048997736081968 1.0049599000834093 1.1330901071988546 0.2255297304509214 0.08053200990894621 0.5258053613113973 3.078028175573777 0.07462847220181751 0.022120718660798323 1.6132905895771216e-08 7.7922873994533735 0.12813020711544532 RKS(ph)PGVAAAVAEDGGLKK ddPTM_KYSE-520_SHP099_60min_R1 1 RKSPGVAAAVAEDGGLKK 18 3 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 RKS(1)PGVAAAVAEDGGLKK 144.22 7.3526e-06 1308700000.0 1231000.0 1052000.0 1099100.0 937680.0 982250.0 1062100.0 961390.0 907270.0 1277200.0 939650.0 True False 1162713.9760623388 1001460.3409158082 1169949.744622178 1026796.8252762287 1059547.4867619986 1055471.0399340081 1058576.6834622137 904122.8921284106 1045292.6755919117 931325.4320366388 1.2484507950348736 1.0753065539354993 1.2562201185290423 1.102511313398595 1.1376769605066637 1.1332999224834712 1.1366345715989947 0.9707915847967974 1.1223710205207724 1.0 19.828925849683344 -6.872966112452504 0.38009023093547345 0.9967316364358705 1.2005273167612043 0.43862581754826935 0.06478544846947204 1.186705156937967 0.4321393771464827 0.07279712845052602 0.0837064684495058 1.339781225085301e-07 6.872966112452504 0.2037956803253338 RKS(ph)PPKEYIDEEGVR ddPTM_KYSE-520_SHP099_60min_R1 5 RKSPPKEYIDEEGVR 15 3 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2;Q9H0E3 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 RKS(1)PPKEYIDEEGVR;RKS(1)PPKEYIDEEGVR;RKS(1)PPKEYIDEEGVR;RKS(1)PPKEYIDEEGVR;RKS(0.998)PPKEY(0.002)IDEEGVR 136.14 8.9526e-06 23022200000.0 10598450.0 9270430.0 9910660.0 9459100.0 9312980.0 8972160.0 8752500.0 9432400.0 12010190.0 8480270.0 True False 10010532.851013733 8825064.62760088 10549517.001216657 10358090.020017872 10045858.542392211 8916161.421386236 9637288.116168296 9399681.205938721 9829442.248251837 8405141.405350221 1.1910011227939143 1.0499602804996666 1.25512665313417 1.232351666733949 1.195203989786252 1.0607985031293738 1.146594405899437 1.1183251717758649 1.1694559049292126 1.0 23.00284066041934 -6.2420956604220095 24.66580157012567 1.1094025938469827 1.1837983246333978 0.2839015312624298 0.06703751213321774 1099.9350724572644 1402563.3133298687 0.022412359421369252 0.0223813207370052 5.726698772395796e-07 6.2420956604220095 0.07439573078641515 RKS(ph)QEALHEQSSYILSSAETPARPR ddPTM_KYSE-520_SHP099_60min_R1 1 RKSQEALHEQSSYILSSAETPARPR 25 3 Q9NVE5;Q9NVE5-3 Q9NVE5 USP40 Ubiquitin carboxyl-terminal hydrolase 40 1 RKS(1)QEALHEQSSYILSSAETPARPR 96.686 0.0020654 1075200000.0 542480.0 438690.0 547060.0 554900.0 451580.0 561380.0 418140.0 706410.0 631660.0 598120.0 True False 512387.5529929311 417614.67391288496 582324.3629269483 607637.5291632309 487116.7768612708 557876.2191866621 460409.6718531396 703959.628587333 516966.4668527933 592821.1221303184 0.8643206759429435 0.7044530944042202 0.9822935472244145 1.0249930484589842 0.8216926804341986 0.9410532087350719 0.7766418143109429 1.1874739315253064 0.8720446143940698 1.0 19.177237326010697 -1.1127873778021575 0.21844330602297074 1.001223205033507 2.782957062071824e-13 0.140891131304401 0.12272102976793231 91.00237189059311 1.209447687148297 0.19346997730602314 31.739223243748086 0.07712809809306295 1.1127873778021575 -1.0012232050332288 RKS(ph)QMEEVQDELIHR ddPTM_KYSE-520_SHP099_60min_R1 7 RKSQMEEVQDELIHR 15 2 A0A2R8Y4W2;A0A2R8YE63;Q12929-2;Q12929 A0A2R8Y4W2 EPS8 Epidermal growth factor receptor kinase substrate 8 1 RKS(1)QMEEVQDELIHR;RKS(1)QMEEVQDELIHR;RKS(1)QMEEVQDELIHR;RKS(1)QMEEVQDELIHR;RKS(1)QMEEVQDELIHR;RKS(1)QMEEVQDELIHR;RKS(1)QMEEVQDELIHR 232.54 8.6673e-19 8962360000.0 3565110.0 3287290.0 3090520.0 2629350.0 2406320.0 2441140.0 2575310.0 2835200.0 3208200.0 2707790.0 True False 3367346.241429409 3129363.6540771173 3289739.8642068366 2879242.6334570968 2595683.6939120726 2425903.9397650966 2835647.4674035255 2825365.3529406516 2625671.7521406 2683801.0872287424 1.2546929269286817 1.1660192213829292 1.2257763363542633 1.0728226645254715 0.9671669432820528 0.9039060127477827 1.0565788503840192 1.0527476743286093 0.9783406693719742 1.0 21.355846317947606 -5.426489051740412 3.187038809569206 0.9951151779204583 1.2111186240372964 0.822470664927933 0.04605914707410121 0.11053707475712367 2.136382841129768 0.014626413479850019 0.022460306951735197 3.745509890850817e-06 5.426489051740412 0.21600344611683808 RKS(ph)QVAELNDDDKDDEIVFK ddPTM_KYSE-520_SHP099_60min_R1 3 RKSQVAELNDDDKDDEIVFK 20 3 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 RKS(1)QVAELNDDDKDDEIVFK;RKS(1)QVAELNDDDKDDEIVFK;RKS(1)QVAELNDDDKDDEIVFK 231.21 7.5531e-20 13366900000.0 5580660.0 4592230.0 4950390.0 4481590.0 4766010.0 4911320.0 5798210.0 5595320.0 7341500.0 5591350.0 True False 5271089.665030097 4371612.377722245 5269500.060304053 4907518.966160829 5141067.872112549 4880666.630118353 6384349.6518763965 5575911.1408775 6008468.664154419 5541814.9890044695 0.9511486174634989 0.7888412706660134 0.9508617791751047 0.8855436307234816 0.9276866662479631 0.8806982260869585 1.152032261009002 1.006152524387891 1.0842059282159073 1.0 22.401927117223778 -6.744215443315465 24.99599040081047 1.0611103909228774 0.8957851424157485 0.6496127170867385 0.05868629897909483 138.34490873514753 200771.08459947217 0.021037672490571646 0.016253948257944434 1.8021235278266141e-07 6.744215443315465 -0.16532524850712893 RKS(ph)QVNGEAGSYEMTNQHVK ddPTM_KYSE-520_SHP099_60min_R1 9 RKSQVNGEAGSYEMTNQHVK 20 2 H0YMH7;Q05D32-2;Q05D32 H0YMH7 CTDSPL2 CTD small phosphatase-like protein 2 1 RKS(0.998)QVNGEAGS(0.001)Y(0.001)EMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(1)QVNGEAGSYEMTNQHVK;RKS(0.998)QVNGEAGS(0.002)YEMTNQHVK;RKS(0.945)QVNGEAGS(0.053)Y(0.002)EMTNQHVK 252.2 5.1590999999999996e-27 12723650000.0 2910223.0 3200990.0 3351730.0 3403760.0 3257931.0 3404251.0 3777970.0 4120970.0 5290690.0 3577880.0 True False 2748787.1288042776 3047209.6356160566 3567787.8787576132 3727252.3270222433 3514311.6346083 3383003.8067662106 4159884.0770340236 4106675.316911624 4330034.063441413 3546182.7667485196 0.7751397233607983 0.8592928892974206 1.0060924981677983 1.0510604140236532 0.9910125523029818 0.9539846164973818 1.1730596956366703 1.1580551784918343 1.2210408623161868 1.0 21.757835462550847 -3.15136636606479 0.3963549871489346 1.1320102931051994 6.889718550448113e-11 0.6582138176860116 0.07743378386320925 8.34636679496967 0.5227375884238187 0.0630625167038244 5.359064737872297 0.0007057219637680026 3.15136636606479 -1.1320102930363023 RKS(ph)TDSVPISK ddPTM_KYSE-520_SHP099_60min_R1 1 RKSTDSVPISK 11 2 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 1 RKS(0.928)T(0.053)DS(0.019)VPISK 93.90899999999999 0.0018590999999999998 827980000.0 927800.0 888490.0 915710.0 764830.0 797040.0 883260.0 740690.0 893010.0 1051300.0 937030.0 True False 876333.0844765533 845805.606749321 974738.1317878043 837519.2132454747 859762.5134627467 877747.246711338 815566.1736377823 889912.3567401001 860410.4211163303 928728.6431983082 0.9435835654413351 0.9107133853830317 1.049540292448665 0.9017910876111982 0.9257413559486446 0.9451062515834517 0.8781533547077619 0.9582049215963292 0.9264389845383608 1.0 19.824897604630547 -3.2489942678656294 13.944334987159115 0.9413094957791485 0.9468392718473191 0.0 0.04734294729661272 0.0 0.0 0.01044855334376508 0.0 0.0005636450951746816 3.2489942678656294 0.005529776068170622 RKS(ph)VEDRFDQQK ddPTM_KYSE-520_SHP099_60min_R1 4 RKSVEDRFDQQK 12 3 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 RKS(1)VEDRFDQQK;RKS(1)VEDRFDQQK;RKS(1)VEDRFDQQK;RKS(1)VEDRFDQQK 166.48 3.6145e-06 10807600000.0 8237100.0 6719920.0 6914400.0 6813200.0 6871300.0 5846290.0 6239190.0 5994000.0 8664100.0 4871590.0 True False 7780171.6427482525 6397084.956394435 7360113.28743116 7460724.479536728 7412032.217651036 5809801.1355388295 6869908.213826456 5973208.21301012 7090917.844187195 4828431.50263967 1.6113248450340212 1.3248784730397838 1.5243279900330857 1.5451652312884634 1.5350807428041444 1.2032481215406394 1.4228032871690786 1.2370908046939486 1.46857583882274 1.0 22.20312318056642 -6.25219582472856 24.498584692940874 1.2909405144574648 1.5009279845027024 0.42792739650898715 0.13821362083378524 546.1854814615726 1447579.0021085353 0.04327531214073347 0.04266669815240378 5.595052619515045e-07 6.25219582472856 0.20998747004523755 RKS(ph)VEEESKK ddPTM_KYSE-520_SHP099_60min_R1 2 RKSVEEESKK 10 3 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 RKS(1)VEEESKK;RKS(1)VEEESKK 156.24 0.00013304 4321300000.0 3152900.0 4248100.0 1647520.0 1489740.0 5156000.0 7469200.0 2094790.0 2657700.0 3333300.0 8351300.0 True False 2978002.3518496715 4044014.8994718986 1753721.7753252028 1631324.441693337 5561747.8663729895 7422581.952240945 2306551.8163802517 2648481.059011845 2728056.7456549653 8277313.979213083 0.35977883155433804 0.4885660867314785 0.21187087740411265 0.19708379382370916 0.6719266516094802 0.8967379962728685 0.27865945669968817 0.3199686595993588 0.3295823684477799 1.0 22.98073125280421 -5.761400326583813 24.99999881276821 0.5492995724470451 0.3194525568879585 0.22578393906202432 0.23869850702398926 2.0110152494593843 1286004.168691 0.0759620070321444 0.09186141602544161 1.7322065378315024e-06 5.761400326583813 -0.2298470155590866 RKS(ph)VEPPK ddPTM_KYSE-520_SHP099_60min_R1 1 RKSVEPPK 8 2 Q9Y2D9 Q9Y2D9 ZNF652 Zinc finger protein 652 1 RKS(1)VEPPK 86.911 0.0037399 755720000.0 543260.0 629530.0 767190.0 671080.0 730490.0 787510.0 990350.0 1199200.0 1203200.0 937940.0 True False 513124.28483803855 599286.433856205 816644.2949474012 734859.2414324401 787975.4070804496 782594.8579779987 1090464.242884576 1195040.2550953845 984729.2102037191 929630.581306278 0.5519657971202042 0.6446500856438185 0.8784610912862685 0.7904852273683237 0.8476220801312491 0.8418342443923575 1.1730081441084923 1.2855001536375492 1.0592693807684541 1.0 19.826298003133235 -6.072842926759966 0.7232698533959281 1.1595139707544124 0.6406152724140628 0.7103092519498326 0.11580013941137905 0.3981139901807253 0.4634615327801338 0.08337052474307685 0.10226894532907979 8.455846162562988e-07 6.072842926759966 -0.5188986983403496 RKS(ph)YTSDLQK ddPTM_KYSE-520_SHP099_60min_R1 3 RKSYTSDLQK 10 2 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;E9PK58;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 RKS(0.966)YT(0.007)S(0.027)DLQK;RKS(1)YTSDLQK;RKS(0.998)YT(0.002)SDLQK 167.21 4.1629e-05 7456100000.0 5236500.0 5062000.0 4096400.0 3102190.0 2935060.0 3854500.0 3559580.0 3367470.0 4386500.0 4319600.0 True False 4946020.906296047 4818813.921783096 4360460.498471742 3397021.204892568 3166032.523792999 3830442.6357458234 3919417.0845530177 3355789.0325434054 3590022.1746664024 4281331.704597947 1.1552529090386188 1.1255408957469748 1.0184822852639084 0.7934496645621567 0.7394971336588637 0.8946848550959295 0.9154668114931972 0.7838189759834416 0.838529322736402 1.0 22.02962818482625 -5.026626184741647 3.062620332922453 0.8434816982686941 1.1384319291457228 0.7298747367899885 0.07120783352981587 0.1238685284254938 2.349291618361542 0.020026921183652235 0.04291011844869401 9.405325175705485e-06 5.026626184741647 0.29495023087702865 RKSEDGT(ph)PAEDGTPAATGGSQPPSMGR ddPTM_KYSE-520_SHP099_60min_R1 1 RKSEDGTPAEDGTPAATGGSQPPSMGR 27 2 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 RKS(0.466)EDGT(0.525)PAEDGT(0.008)PAATGGSQPPSMGR 135.72 6.1987000000000005e-06 1163300000.0 628520.0 475820.0 411360.0 425210.0 416810.0 545610.0 483220.0 582800.0 546040.0 584400.0 True False 593654.7426764428 452960.8929796193 437876.9237992712 465621.8305559522 449610.5756755091 542204.6456062462 532068.5933727326 580778.402826542 446892.90054823685 579222.67065632 1.024916276159857 0.7820151315320015 0.7559733863716188 0.8038736295116934 0.7762309703210566 0.9360901654485855 0.9185907602163484 1.0026858965455534 0.7715390353106523 1.0 19.143758544750487 -6.273351496981544 24.347720018844775 0.9254996476257888 0.8206050185708981 0.21500605302429399 0.0922118745970725 807.6497404237948 1650786.154325996 0.03179317027845782 0.02826477526620524 5.329034146114359e-07 6.273351496981544 -0.10489462905489078 RKSGET(ph)DHQQFPR ddPTM_KYSE-520_SHP099_60min_R1 1 RKSGETDHQQFPR 13 2 E7ESJ3;Q9UPS8;Q9UPS8-2 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 RKS(0.298)GET(0.702)DHQQFPR 146.33 6.6813e-06 1353500000.0 1211800.0 1142500.0 1501500.0 1199100.0 1303700.0 1174700.0 1040100.0 1067900.0 1368200.0 1020000.0 True False 1144579.0383365897 1087612.585072539 1598289.0924849415 1313062.1034774398 1406293.772961687 1167368.2615671586 1145243.4583977875 1064195.7041497326 1119769.369515233 1010963.5935479911 1.1321664258152693 1.0758177564590108 1.5809561320360936 1.298822343215377 1.3910429435211202 1.1547085068318466 1.1328236404424212 1.0526548245075005 1.1076258103275376 1.0 19.947299613693207 -6.547992251694926 2.722580372682769 1.0751009542668346 1.2990531895487702 0.381516748784299 0.13338921900686643 0.3223268054367989 4.8512052847646805 0.058673289888938204 0.0454474953870552 2.8314425114876656e-07 6.547992251694926 0.22395223528193564 RKSGGNEVS(ph)IEER ddPTM_KYSE-520_SHP099_60min_R1 1 RKSGGNEVSIEER 13 2 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 RKS(0.373)GGNEVS(0.627)IEER 81.656 0.0059139 1446400000.0 1397900.0 1387600.0 1256900.0 1139500.0 1147700.0 1149800.0 1089000.0 1120200.0 1524400.0 1163100.0 True False 1320355.7003554383 1320937.6131699358 1337921.7851111041 1247797.7373968335 1238017.460480272 1142623.6717033451 1199086.7476157967 1116314.287656646 1247607.3869967991 1152795.8388781082 1.1453508555690122 1.145855639499412 1.1605886662578164 1.0824099943066938 1.073926031590382 0.9911760896147382 1.040155339893262 0.9683538489721079 1.0822448736551311 1.0 20.136705602419326 -5.686236683828004 1.4944453028453917 1.0160999227531529 1.1517192349996757 0.765945327591496 0.031458931187508615 0.17215729028427743 0.7970847796948606 0.010710603227394257 0.015766528048451155 2.059507207545941e-06 5.686236683828004 0.1356193122465228 RKSLS(ph)DSESDDSK ddPTM_KYSE-520_SHP099_60min_R1 1 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 RKS(0.107)LS(0.425)DS(0.425)ES(0.038)DDS(0.006)K 157.37 2.6774e-05 943780000.0 1225400.0 1061000.0 1089200.0 949850.0 972620.0 1046100.0 1079200.0 1092000.0 1409400.0 998750.0 True False 1157424.6192256615 1010027.967406531 1159411.5747816188 1040123.4584171853 1049159.660549205 1039570.9018689076 1188296.0679770147 1088212.106874716 1153488.4880827141 989901.8520157416 1.1692316938985339 1.0203314251304878 1.1712389187076513 1.050733925084772 1.0598623069679043 1.0501757318182854 1.200418067263216 1.099313133578632 1.1652554096488055 1.0 19.91692596464969 RKSLSDS(ph)ESDDSK ddPTM_KYSE-520_SHP099_60min_R1 2 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 RKS(0.103)LS(0.008)DS(0.687)ES(0.202)DDSK;RKS(0.072)LS(0.072)DS(0.838)ES(0.019)DDSK 292.76 3.9636e-29 1170990000.0 1418300.0 1304530.0 1208140.0 1154980.0 1154600.0 1207980.0 1181160.0 1327470.0 1656830.0 1233920.0 True False 1339624.0716890458 1241858.420660549 1286018.637492348 1264748.9519425994 1245460.4512246412 1200440.5487425707 1300563.179810722 1322865.3164038283 1355991.4372854296 1222988.428775234 1.0953693756780813 1.0154294116291946 1.0515378618751412 1.034146294588565 1.0183746811667809 0.9815632924219537 1.0634304865117779 1.0816662572422018 1.1087524668106565 1.0 20.221979323289588 -6.976331784195766 24.986794145635482 1.0716353227569975 1.0314060255824153 0.1278238800276743 0.03744782735719767 359.8381987904841 379883.81079167814 0.01529984006450731 0.010314701746224696 1.0560104498100821e-07 6.976331784195766 -0.040229297174582124 RKSLSDSES(ph)DDSK ddPTM_KYSE-520_SHP099_60min_R1 1 RKSLSDSESDDSK 13 2 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 RKS(0.018)LS(0.018)DS(0.21)ES(0.755)DDSK 265.64 4.8210000000000004e-21 609570000.0 787960.0 681810.0 689140.0 631400.0 697200.0 724250.0 661860.0 672520.0 871520.0 633760.0 True False 744250.288040682 649054.8241823257 733563.0670629854 691408.0661626684 752065.6734746408 719729.6871031024 728767.2679311207 670187.1850873481 713273.9372313371 628145.3794578183 1.1848376385146369 1.0332875882053854 1.1678237093714803 1.1007134475134641 1.197279639506039 1.1458011324135422 1.1601888539881544 1.06693005632839 1.135523655124228 1.0 19.260738972964244 -8.68144695823894 0.8082889233851158 0.998728254369417 1.136150676422726 0.4022597945358537 0.04895037335806866 2.625799998534712 2.321076280624497 0.05620998464461083 0.016083995943791157 2.082346713291716e-09 8.68144695823894 0.137422422053309 RKSYT(ph)SDLQK ddPTM_KYSE-520_SHP099_60min_R1 1 RKSYTSDLQK 10 2 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;E9PK58;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 RKS(0.065)Y(0.009)T(0.715)S(0.211)DLQK 82.831 0.031296 599270000.0 3259800.0 3283300.0 2916100.0 2471200.0 2064500.0 2297400.0 2483200.0 2356400.0 3109100.0 2911600.0 True False 3078972.3957498074 3125565.3396662287 3104076.4719249653 2706062.1050066277 2226964.404601828 2283061.0744227385 2734226.0896965563 2348226.1983878934 2544565.8140328974 2885805.4891905254 1.0669369114733598 1.083082470864298 1.0756360688729805 0.9377146571876831 0.7716959486505435 0.7911347743201993 0.9474741454121749 0.8137160342870426 0.8817523646566539 1.0 21.460542631025334 -5.398941544039423 3.480272183297995 0.858116514636102 1.0764591964242332 0.6609081568067743 0.06597825150182614 0.1375543209784441 3.046348780546035 0.018930077477273863 0.029180997906068172 3.990786146582923e-06 5.398941544039423 0.2183426817881312 RKT(ph)ITGVPDNIQK ddPTM_KYSE-520_SHP099_60min_R1 1 RKTITGVPDNIQK 13 2 Q5SYE7-2 Q5SYE7-2 NHSL1 NHS-like protein 1 1 RKT(0.997)IT(0.003)GVPDNIQK 92.633 0.0017587 0.0 154250.0 200260.0 181580.0 171620.0 200720.0 159780.0 165850.0 184930.0 258480.0 154460.0 True False 145693.44501024834 190639.20900361176 193284.9373382724 187930.71320056572 216515.52205942333 158782.75375261845 182615.73654001826 184288.52099298636 211546.54775054604 153091.6045680615 0.9516749492652675 1.2452623351978607 1.2625443301323669 1.2275703408478904 1.4142873652040455 1.0371747961007671 1.1928527175298558 1.2037794071918249 1.3818298419917379 1.0 17.22403564309995 -4.25894952586831 24.442125460707988 1.2260660155829566 0.9516748162393995 0.29766484571911855 0.1223832632322684 202.22738724371416 1985034.8827555997 0.029070357545338654 0.19023585715315194 5.50871715537551e-05 4.25894952586831 -0.27439119934355705 RKT(ph)LDAEVVEKPAK ddPTM_KYSE-520_SHP099_60min_R1 3 RKTLDAEVVEKPAK 14 3 H0Y3X6;A0A0C4DFX9;Q9H3P2;H7C2C7;Q9H3P2-7 H0Y3X6 NELFA Negative elongation factor A 1 RKT(1)LDAEVVEKPAK;RKT(1)LDAEVVEKPAK;RKT(1)LDAEVVEKPAK 219.95 3.7885e-14 2263600000.0 1253090.0 1210490.0 1373890.0 1993720.0 1834340.0 2727590.0 3739460.0 5114900.0 4574600.0 3503380.0 True False 1183578.5997270164 1152336.2434174663 1462453.1477017223 2183202.549366225 1978692.1220330931 2710566.0990618635 4117481.1104126424 5097157.605726632 3743967.9562815214 3472342.7787883948 0.34085880200456553 0.3318613157827555 0.4211718833277216 0.6287405041641685 0.5698435460117559 0.7806159333174076 1.1857933887072507 1.4679304234777144 1.0782253351116173 1.0 21.727477942466113 -6.449956556099997 1.4514615013303356 1.23857852476032 0.41956999693847535 0.8520025172915529 0.14211841028626307 0.14396991099531714 0.6122148189694699 0.07263056686230741 0.05639677551137594 3.5484888415476335e-07 6.449956556099997 -0.8190085278218446 down RKT(ph)PEASAIGLHQDPELGDAALR ddPTM_KYSE-520_SHP099_60min_R1 3 RKTPEASAIGLHQDPELGDAALR 23 2 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 RKT(1)PEASAIGLHQDPELGDAALR;RKT(0.98)PEAS(0.02)AIGLHQDPELGDAALR;RKT(1)PEASAIGLHQDPELGDAALR 220.92 9.4278e-21 2845530000.0 814283.0 870218.0 759994.0 1078371.0 616857.0 714449.0 635800.0 725720.0 942473.0 785706.0 True False 769113.0987570836 828411.4210561529 808984.4292733934 1180859.055615936 665400.1364637788 709989.8587795993 700072.8688100313 723202.6467043217 771343.661010912 778745.2561100178 0.9876311832690339 1.063777165326473 1.0388306354691983 1.5163611544994238 0.8544516082031502 0.9117100273921861 0.8989754522641074 0.9286767926097655 0.9904954861156033 1.0 19.570791944120934 RKT(ph)SDANETEDHLESLICK ddPTM_KYSE-520_SHP099_60min_R1 4 RKTSDANETEDHLESLICK 19 2 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RKT(0.455)S(0.455)DANET(0.089)EDHLESLICK;RKT(0.499)S(0.499)DANET(0.003)EDHLESLICK;RKT(0.499)S(0.499)DANET(0.002)EDHLESLICK;RKT(0.49)S(0.49)DANET(0.019)EDHLESLICK 245.09 2.3528e-26 12023570000.0 3294337.0 4801680.0 4557390.0 5979990.0 5013940.0 5959710.0 6125600.0 7114040.0 12824750.0 6953820.0 True False 3111593.559512003 4571000.0853313785 4851166.651481818 6548326.451650446 5408508.552583823 5922513.239247817 6744835.428094874 7089363.055669424 10496098.685638422 6892214.564790099 0.4514649870896418 0.6632120985732236 0.7038618147880542 0.9501048451253308 0.7847272457555212 0.8593048262751213 0.9786165773990652 1.0286045202200302 1.5228920381061988 1.0 22.71653618480755 -5.386357940718732 0.3888777808789822 1.2020654816999619 0.3426103750822636 0.6465275132884098 0.16102625840235435 1.6620340642352445 0.36986162418340357 0.15834791952903848 0.618621845452756 4.108109956482607e-06 5.386357940718732 -0.8594551066176983 RKT(ph)SDFNTFLAQEGCTK ddPTM_KYSE-520_SHP099_60min_R1 1 RKTSDFNTFLAQEGCTK 17 2 Q9UHD1;Q9UHD1-2;E9PHZ2 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 RKT(0.888)S(0.112)DFNTFLAQEGCTK 108.56 0.00056742 1428600000.0 949500.0 895640.0 850760.0 932290.0 911670.0 1001100.0 750260.0 920290.0 1166200.0 922470.0 True False 896829.3422186754 852612.1100169518 905601.3508641284 1020894.5612967897 983413.2423072667 994851.7635608113 826103.6026319811 917097.7287873002 954447.4775096208 914297.6334708005 0.980894305516451 0.9325323382718581 0.9904885648958099 1.1165888698862017 1.0755942116727282 1.088104931196438 0.9035390362938789 1.0030625643269688 1.043913319436698 1.0 19.802304360107318 -5.0050530540432545 23.788138210739973 1.0334533455173949 0.9579125628113122 0.23198575165021518 0.05645913994070466 182.19263065321744 857736.8031088071 0.01616362410274961 0.03212683793146504 9.884323389543586e-06 5.0050530540432545 -0.07554078270608267 RKT(ph)SQS(ph)EEEEAPR ddPTM_KYSE-520_SHP099_60min_R1 2 RKTSQSEEEEAPR 13 2 Q7RTP6;A0A5F9ZHV5;J3KSK6;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 2 RKT(0.952)S(0.05)QS(0.999)EEEEAPR;RKT(0.978)S(0.022)QS(1)EEEEAPR 129.12 0.00012675 875250000.0 1039060.0 1101430.0 1009620.0 970100.0 1070640.0 1085420.0 1069990.0 1245340.0 1647280.0 1184230.0 True False 981421.2704852421 1048515.6495198641 1074701.7206491155 1062298.0123287998 1154893.276891695 1078645.4911638948 1178155.031296075 1241020.2062045422 1348175.4765495204 1173738.6435169994 0.8361497475660373 0.8933127108928474 0.9156226785111812 0.9050549866414229 0.9839441542379179 0.9189826859000171 1.0037626671009505 1.0573224397604732 1.1486164181404448 1.0 20.162679768505914 -6.679651677733361 0.8655009117069142 1.0823843381063714 0.8882723344305131 0.7043811539307384 0.04714899359253644 0.332259776365786 0.49785370182712946 0.036063634097925255 0.022650549166468054 2.090972505559701e-07 6.679651677733361 -0.19411200367585824 RKT(ph)SQSEEEEAPR ddPTM_KYSE-520_SHP099_60min_R1 2 RKTSQSEEEEAPR 13 2 Q7RTP6;A0A5F9ZHV5;J3KSK6;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 RKT(0.808)S(0.162)QS(0.03)EEEEAPR;RKT(0.902)S(0.098)QSEEEEAPR 184.22 7.5561e-08 1467930000.0 451040.0 453750.0 445860.0 464770.0 531910.0 595810.0 643480.0 759570.0 987760.0 737670.0 True False 426019.91207405156 431951.1689073649 474600.849001223 508941.60106180375 573768.2908460937 592091.3287855021 708529.2381596073 756935.2289549712 808407.6834032787 731134.8176985753 0.5826831136493442 0.5907955119235551 0.6491290491337078 0.6960981596579154 0.7847640092591527 0.8098251026387357 0.969081516853315 1.0352881720742133 1.1056889424961849 1.0 19.479777931081767 -6.345340189630285 0.7544259384491963 1.0751159744550034 0.5888977590793387 0.9576196927379735 0.037807759129010736 0.12265875927309182 0.1504962305945115 0.027922456274824575 0.025128100473013476 4.515021371670637e-07 6.345340189630285 -0.4862182153756647 RKTS(ph)DANETEDHLESLICK ddPTM_KYSE-520_SHP099_60min_R1 3 RKTSDANETEDHLESLICK 19 2 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RKT(0.397)S(0.602)DANET(0.001)EDHLESLICK;RKT(0.315)S(0.683)DANET(0.002)EDHLESLICK;RKT(0.236)S(0.761)DANET(0.003)EDHLESLICK 236.02 3.2985000000000003e-26 4105740000.0 1548720.0 2125220.0 2033550.0 2860440.0 2203020.0 2693420.0 2866290.0 3382680.0 5663610.0 2965850.0 True False 1462809.4143032194 2023121.2411797466 2164635.8867950398 3132295.3575773556 2376385.140530843 2676609.36670658 3156042.5654946603 3370946.272603448 4635241.191989599 2939574.8763963873 0.4976261792305394 0.688235995423897 0.736377189836599 1.0655606641383544 0.8084111616316586 0.9105430136169296 1.073639113885624 1.1467461841747257 1.5768406612836212 1.0 21.487176095793217 -5.218345636810698 0.41412225233306144 1.250264060436276 0.34571521321569154 0.6271436736103871 0.17305212417805768 1.7504702636496816 0.4151565168417316 0.15863700284107118 0.7305173445079445 6.048593009320238e-06 5.218345636810698 -0.9045488472205845 RKTS(ph)QSEEEEAPR ddPTM_KYSE-520_SHP099_60min_R1 4 RKTSQSEEEEAPR 13 2 Q7RTP6;A0A5F9ZHV5;J3KSK6;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 RKT(0.116)S(0.881)QS(0.004)EEEEAPR;RKT(0.196)S(0.803)QS(0.001)EEEEAPR;RKT(0.194)S(0.767)QS(0.039)EEEEAPR;RKT(0.141)S(0.858)QS(0.001)EEEEAPR 106.36 0.00044161 641740000.0 1005202.0 943714.0 979414.0 897293.0 1162015.0 1300344.0 1178344.0 1372713.0 1799694.0 1574858.0 True False 949441.4412394922 898376.5628964069 1042548.5935578063 982571.4569390217 1253458.969539063 1292228.0707578838 1297462.5110492094 1367951.3789966223 1472914.9361937924 1560905.983340982 0.6082630545161318 0.575548157598519 0.6679124845984142 0.6294879175463943 0.8030329711826361 0.827870534516104 0.831223997407009 0.8763829427244827 0.9436282209907014 1.0 20.573952212692202 -6.10130583806919 0.40929049917894295 0.9967601505988015 0.5196964572255969 0.9403307878850268 0.0342232397960867 0.3354225294599242 0.1117373578160478 0.03494495530630803 0.06541463492678726 7.919434331004707e-07 6.10130583806919 -0.47706369337320464 RKVDWLTEK ddPTM_KYSE-520_SHP099_60min_R1 3 RKVDWLTEK 9 2 P60842;P60842-2;J3KT12;J3QS69;J3KSZ0;J3QL43;Q14240-2;Q14240;E7EQG2;J3KTN0;J3QL52;I3L3H2;P38919 P60842;I3L3H2 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 0 ;; 158.79 0.00010124 11256900000.0 3549450.0 2829290.0 2122470.0 1707510.0 2638730.0 2562960.0 2049240.0 2025320.0 2076500.0 1907960.0 False True 3352554.932846846 2693366.6615491277 2259287.812272073 1869791.237018401 2846383.038680062 2546963.6159582613 2256397.1778550916 2018294.6376332392 1699459.9443052036 1891056.958770416 1.7728471462999775 1.4242652232433979 1.1947222434490203 0.9887545842268854 1.5051810182020158 1.3468465897581015 1.1931936620894927 1.0672838955340374 0.8986825787681242 1.0 20.850761387343766 -1.0000000051246456 0.717880815208835 1.1441900678526773 92.21250670654386 0.5693171152857046 0.16998434245864863 261.0980672778186 1.2863156540031306 0.07107905517330385 38276.059459795564 0.09999999882000675 1.0000000051246456 91.06831663869119 RKVMDS(ph)DEDDDY ddPTM_KYSE-520_SHP099_60min_R1 2 RKVMDSDEDDDY 12 2 K7EQA1;O14737 K7EQA1 PDCD5 Programmed cell death protein 5 1 RKVMDS(1)DEDDDY;RKVMDS(1)DEDDDY 127.75 6.2686e-05 2094890000.0 2740570.0 2878390.0 2669610.0 1945550.0 2074300.0 2297780.0 1690130.0 1617660.0 3072550.0 1909390.0 True False 2588545.1189091466 2740107.823848529 2841697.332127025 2130454.4870490627 2237535.6088474547 2283438.702701785 1860984.8344792367 1612048.715024682 2514652.3726823754 1892474.2900829392 1.3678099261235943 1.447896987667104 1.5015777741437561 1.1257508216693892 1.182333424856933 1.2065890219315538 0.9833606956941421 0.8518206685671976 1.32876435144182 1.0 20.851842270157746 -5.311703814022378 5.798869848087773 1.0922251695480611 1.439922086195508 0.5981218337363682 0.12854591984758373 0.14214617177656205 11.420727901507226 0.03733699598627618 0.05663452098528677 4.8786109472834276e-06 5.311703814022378 0.34769691664744684 RKVS(ph)LVLEK ddPTM_KYSE-520_SHP099_60min_R1 1 RKVSLVLEK 9 2 Q9P2M7-2;Q9P2M7;H0Y4A8 Q9P2M7-2 CGN Cingulin 1 RKVS(1)LVLEK 135.02 0.0004271 0.0 2517900.0 2100200.0 2058500.0 1933800.0 1913000.0 2035400.0 1848100.0 1673700.0 2745400.0 2133000.0 True False 2378227.0676907897 1999303.2395355299 2191194.203716452 2117587.77058183 2063542.2165189136 2022696.3136067034 2034923.9837178665 1667894.3253445171 2246904.5659020036 2114103.27944889 1.1249341935228216 0.9456979982816702 1.0364650700923457 1.0016482123493267 0.9760839201085971 0.9567632448562234 0.9625471014114011 0.788937012471457 1.0628168395291135 1.0 21.011614427174923 -1.0000000003766616 0.5030443969098943 0.9474672335022412 5.689306153195305 0.2527714677127747 0.07240067719695717 148.79717312448292 1.571347652743816 0.03846493861183572 746.5807860421176 0.09999999991327047 1.0000000003766616 4.7418389196930635 RKWDKDEYEK ddPTM_KYSE-520_SHP099_60min_R1 2 RKWDKDEYEK 10 3 R4GNG8;Q96NC0 R4GNG8 ZMAT2 Zinc finger matrin-type protein 2 0 ; 143.0 0.00011047 5254300000.0 4281200.0 4619200.0 4396200.0 4886300.0 3895000.0 4203600.0 4195300.0 3987900.0 5853500.0 2367990.0 False True 4043713.3016393874 4397286.698439443 4679586.086168704 5350692.482880342 4201514.34048153 4177363.773153748 4619401.8661823245 3974066.905682853 4790651.954726954 2347011.4508683397 1.7229201417587066 1.8735684893282256 1.993848851669371 2.2797896792964987 1.790155024138066 1.7798651010450846 1.968205934603878 1.6932456397741649 2.041171104194879 1.0 21.16239344998827 -11.077338387189105 0.5054597967654778 5.0472818898809484e-11 1.9182730955182368 0.7209216763945241 0.16834163904611416 47.82158454502559 3.605535297367179 55.21366224133254 0.0823214814318485 8.368769625401767e-12 11.077338387189105 1.918273095467764 RKWEDDLKK ddPTM_KYSE-520_SHP099_60min_R1 2 RKWEDDLKK 9 3 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YHI8;H0YIS4;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 0 ; 118.4 0.00040035 2421500000.0 2131640.0 2566450.0 2705830.0 2504050.0 2575270.0 2282820.0 2449360.0 2433540.0 3211600.0 1353060.0 False True 2013393.67988101 2443153.8896800126 2880252.1312810737 2742034.1591299176 2777929.0977180665 2268572.073610917 2696965.2122499794 2425098.6177325053 2628454.397847627 1341072.94106475 1.501330478178516 1.8217904596153145 2.147722202935723 2.0446569870784725 2.071422823215357 1.6916097582356524 2.011050353539095 1.8083271561702594 1.9599637852365848 1.0 20.35495627699949 -9.803641423352014 7.9154533992729075 0.9999999999999856 1.9050059338779677 0.6761493137201158 0.18577873179619403 1.119446627302819e-09 3.4662110274625295e-10 0.1841241296706539 0.04465666087394287 1.5716599148858362e-10 9.803641423352014 0.9050059338779821 RLAAAEETAVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 RLAAAEETAVSPR 13 1 Q9BUH6 Q9BUH6 C9orf142 Protein PAXX 1 RLAAAEET(0.001)AVS(0.999)PR;RLAAAEET(0.002)AVS(0.998)PR;RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR;RLAAAEET(0.004)AVS(0.996)PR;RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR;RLAAAEETAVS(1)PR 214.73 3.2251e-11 9180890000.0 5271710.0 5110170.0 5216630.0 3988120.0 4367020.0 4411680.0 4075530.0 3927290.0 5728940.0 4495730.0 True False 4979277.737406659 4864669.762678448 5552902.316703114 4367149.725727997 4710679.629055116 4384145.06869039 4487524.345739771 3913667.147626374 4688708.910824875 4455901.329825013 1.1174569113724517 1.091736419322707 1.2461905921335068 0.98008223308201 1.057177724633348 0.9838963532126864 1.0070968842382333 0.8783109988164991 1.0522470233893184 1.0 22.087285855739054 -5.284356600400937 24.87722662362714 0.9917881379343981 1.1457888217393346 0.5972200490312959 0.05925716708183391 486.83823206386023 528474.196864057 0.016514997905283192 0.024516635662978407 5.195692016269685e-06 5.284356600400937 0.15400068380493648 RLAEDDWTGMES(ph)EEENKKDDEEMDIDTVK ddPTM_KYSE-520_SHP099_60min_R1 4 RLAEDDWTGMESEEENKKDDEEMDIDTVK 29 3 H3BUB4;O95149;H3BTA6;H3BSK1;H3BRI5 H3BUB4 SNUPN Snurportin-1 1 RLAEDDWT(0.004)GMES(0.996)EEENKKDDEEMDIDTVK;RLAEDDWT(0.007)GMES(0.993)EEENKKDDEEMDIDTVK;RLAEDDWT(0.001)GMES(0.999)EEENKKDDEEMDIDTVK;RLAEDDWT(0.023)GMES(0.977)EEENKKDDEEMDIDTVK 276.55 1.6149000000000002e-41 3390250000.0 1810260.0 1696850.0 1469500.0 1430590.0 1581483.0 1450750.0 1401080.0 1560650.0 1786710.0 1447020.0 True False 1709841.269136155 1615330.7789762218 1564226.3212831337 1566552.843477434 1705936.71469262 1441695.3311216128 1542714.8396230878 1555236.4694084479 1462288.5032937864 1434200.5285645258 1.1921912139075244 1.1262935320439376 1.090660817737077 1.0922829913090173 1.1894687532991441 1.005225770321385 1.075661881931652 1.0843926204413448 1.0195844124791764 1.0 20.451815323726418 -1.0000000021408895 0.12182622824787073 0.9636697643027342 1.6207837147511177 0.5520927354102421 0.04341588674547933 74.54155415521 0.6238244678407608 0.28904698168591725 8.33050295534997 0.09999999950704198 1.0000000021408895 0.6571139504483835 RLAVPTEVSTEVPEMDT(ph)ST ddPTM_KYSE-520_SHP099_60min_R1 4 RLAVPTEVSTEVPEMDTST 19 1 O00488 O00488 ZNF593 Zinc finger protein 593 1 RLAVPTEVSTEVPEMDT(0.333)S(0.333)T(0.333);RLAVPTEVSTEVPEMDT(0.333)S(0.333)T(0.333);RLAVPTEVSTEVPEMDT(0.333)S(0.333)T(0.333);RLAVPTEVSTEVPEMDT(0.333)S(0.333)T(0.333) 156.29 4.646e-07 1426909000.0 1303160.0 1424380.0 1345460.0 1074460.0 1090550.0 1223250.0 1109590.0 1121140.0 1460800.0 1255570.0 True False 1230871.1170149464 1355950.6467620316 1432190.5044121144 1176576.3553518227 1176370.0806192898 1215615.2430084525 1221758.1857548326 1117251.0270160427 1195555.5437712702 1244446.6266186773 0.9890911274832114 1.0896012876392498 1.1508653515366598 0.9454614847956421 0.9452957286048014 0.9768319645105524 0.9817682491329562 0.8977894295489061 0.9607125916036668 1.0 20.247072924863055 -5.281466952717674 24.76528017036442 0.9552193126777643 1.0778274597315847 0.5937271327752524 0.04477345281781641 457.8222136432594 566123.4520182104 0.012723597720710406 0.01889979952477513 5.230377647975525e-06 5.281466952717674 0.1226081470538204 RLAVPTEVSTEVPEMDTS(ph)T ddPTM_KYSE-520_SHP099_60min_R1 1 RLAVPTEVSTEVPEMDTST 19 1 O00488 O00488 ZNF593 Zinc finger protein 593 1 RLAVPTEVSTEVPEMDT(0.118)S(0.764)T(0.118) 131.48 9.4975e-06 788690000.0 448280.0 442840.0 441880.0 313870.0 346330.0 394700.0 310820.0 393380.0 479850.0 389230.0 True False 423413.01477597514 421565.30168360804 470364.2918329978 343700.11043154384 373584.2006518531 392236.5308934687 342240.7189108741 392015.4565955823 392721.33603412064 385781.7250163578 1.0975455479598515 1.0927560180973657 1.2192498019781874 0.8909185898242598 0.9683823168036602 1.01673175647923 0.8871356435983652 1.0161587010866318 1.017988438974056 1.0 18.557425277096144 -5.263157880511984 24.999739808779097 0.9700147817073175 1.1321410120294981 0.6496362461738017 0.05565620094821807 93.8759530718407 1365660.8484399086 0.01544747307471683 0.02434153932998339 5.455594959860782e-06 5.263157880511984 0.16212623032218065 RLDDSLLYLR ddPTM_KYSE-520_SHP099_60min_R1 1 RLDDSLLYLR 10 1 P49406;S4R455;S4R3W9 P49406 MRPL19 39S ribosomal protein L19, mitochondrial 0 152.7 0.0014803 0.0 58196.0 56822.0 44819.0 34483.0 53787.0 52601.0 39432.0 35277.0 49212.0 36584.0 False True 54967.75186915017 54092.18582843915 47708.10445293549 37760.25395230801 58019.73089383314 52272.697647649766 43418.17137923423 35154.632320713696 40276.34133356501 36259.89422192133 1.5159380094362989 1.4917910542534651 1.3157265203518718 1.0413779400790315 1.6001075606766844 1.44161197293421 1.1974158312073973 0.9695183363072407 1.1107683074600778 1.0 15.146087095979228 -6.976487146336119 3.7185523307442545 1.0338996103281684 1.3929122427281797 0.5724413493590085 0.14566188961963003 0.18301337324109335 5.473657687200781 0.07278789129912691 0.04460304912993429 1.0556327459516098e-07 6.976487146336119 0.35901263240001136 RLDECEEAFQGTK ddPTM_KYSE-520_SHP099_60min_R1 1 RLDECEEAFQGTK 13 1 K9J957;P61289;P61289-3;P61289-2;K7ENH2;B3KQ25;K7ESG5;K7EMD0;K7EPX6;K7EKR3 K9J957 PSME3 Proteasome activator complex subunit 3 0 90.725 0.054831 0.0 359210.0 341970.0 296530.0 261890.0 363710.0 388890.0 352810.0 352510.0 393380.0 380160.0 False True 339283.9052326182 325541.2478925655 315644.7982647753 286779.9468599001 392331.90777318075 386462.7932585791 388475.47789378284 351287.22508645256 321952.10830280825 376792.0781600045 0.9004539237912044 0.8639811364460922 0.837716121331874 0.7611092787840384 1.0412424531032132 1.0256659193733577 1.0310075514082782 0.9323105379547779 0.8544556187991073 1.0 18.52340910786039 -5.7669608102824395 24.99999973747997 0.9821515139845967 0.8422484719691774 0.5572171200631565 0.06111090310152813 111.3982368290287 504389.7169904868 0.020386229807497182 0.02377249608813457 1.7101696298323469e-06 5.7669608102824395 -0.13990304201541925 RLDEEEEDNEGGEWER ddPTM_KYSE-520_SHP099_60min_R1 2 RLDEEEEDNEGGEWER 16 1 Q99613-2;Q99613 Q99613-2 EIF3C Eukaryotic translation initiation factor 3 subunit C 0 ; 158.98 1.7355999999999997e-07 2496500000.0 384050.0 340260.0 277930.0 265460.0 317930.0 406750.0 265420.0 311140.0 328850.0 327850.0 False True 362745.9809153058 323913.39885932714 295845.8125037227 290689.23858654074 342949.2822257493 404211.3223737488 292251.2438495728 310060.7279606222 269139.12963388686 324945.5040634401 1.1163286655121278 0.9968237590881964 0.9104474713580398 0.8945784291565044 1.055405530888017 1.243935728665547 0.8993854052294126 0.9541930080069305 0.8282592812280979 1.0 18.309838261471015 RLDFDYK ddPTM_KYSE-520_SHP099_60min_R1 1 RLDFDYK 7 1 Q99961-3;Q99961-2;Q99961;M0R0I3;Q99962 Q99961-3 SH3GL1;SH3GL2 Endophilin-A2;Endophilin-A1 0 147.29 0.0035169000000000003 492480000.0 1174700.0 1015600.0 692000.0 575500.0 1022700.0 966980.0 834060.0 856280.0 795420.0 810140.0 False True 1109537.0492936051 966809.0515533215 736607.4272391471 630195.3469696156 1103180.6716329828 960944.7191369812 918374.9244411675 853309.7645372548 650991.778906451 802962.7898793825 1.3818038186555006 1.2040521226376522 0.9173618460573958 0.7848375477826074 1.3738876639584976 1.1967487550467066 1.1437328553906236 1.0627015040951464 0.8107371687849197 1.0 19.614973607758074 -7.583884993722902 5.460702408391736 0.9081641540575854 1.13220598819502 0.2174565786842556 0.17752675193326029 0.3455894459867482 20.387889878821714 0.13360494499465553 0.04861105778781171 2.6068437814398775e-08 7.583884993722902 0.2240418341374345 RLDFDYKK ddPTM_KYSE-520_SHP099_60min_R1 2 RLDFDYKK 8 2 Q99961-3;Q99961-2;Q99961;M0R0I3;Q99962 Q99961-3 SH3GL1;SH3GL2 Endophilin-A2;Endophilin-A1 0 ; 145.72 0.00033741 2192380000.0 4041100.0 3994400.0 2814100.0 2310950.0 3855500.0 3598900.0 2917700.0 3146400.0 3517100.0 2805500.0 False True 3816932.127266873 3802503.028283368 2995501.388719202 2530581.9931875444 4158905.9152057874 3576437.9301558314 3212649.590007903 3135485.872775283 2878483.298875914 2780645.452645975 1.37267846342467 1.3674893448443868 1.077268367985849 0.9100699950004492 1.495662063370324 1.2861898401152168 1.1553611004059674 1.12761081057337 1.035185300641921 1.0 21.406988374304433 -7.451286660104764 1.5617715172738265 1.0089062585196598 1.2411422212383152 0.2561919258314559 0.15506221837443054 0.6529068100437009 2.8119819045387158 0.14571396114133428 0.04962817210532918 3.5376375894945474e-08 7.451286660104764 0.23223596271865543 RLDLPIER ddPTM_KYSE-520_SHP099_60min_R1 2 RLDLPIER 8 1 B4E1E0;P17812-2;P17812;A0A3B3IRI2;A0A3B3IRQ8;A0A3B3ITF6;A0A3B3ISY3;A0A3B3ITB8 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 0 ; 128.28 0.0020394000000000002 586580000.0 276370.0 267660.0 204442.0 167701.0 282400.0 262130.0 213770.0 219660.0 214092.0 219640.0 False True 261039.20517006368 254801.21183414944 217620.65843876568 183639.25261885577 304623.27336379566 260493.94943781386 235379.95779414964 218898.0507290296 175218.289620125 217694.16047733402 1.1991098180938238 1.1704549689135044 0.9996623610003723 0.8435653589246185 1.3993176146565152 1.1966051311005932 1.0812414870386797 1.0055301908377139 0.8048828192539802 1.0 17.73194318300389 -7.383477332975105 2.7878863838921975 0.9037013232869006 1.1278264539078817 0.2862804224663982 0.14310384390662387 0.38717549123609907 5.67666918054249 0.10455395183260316 0.04157717667874095 4.135448978313155e-08 7.383477332975105 0.22412513062098116 RLDPDAIPS(ph)PIQVIEDDRNNR ddPTM_KYSE-520_SHP099_60min_R1 1 RLDPDAIPSPIQVIEDDRNNR 21 2 P53992;G5EA31 P53992 SEC24C Protein transport protein Sec24C 1 RLDPDAIPS(1)PIQVIEDDRNNR 88.51700000000001 0.0014892000000000002 185340000.0 0.0 4751.3 4640.4 6789.5 3785.0 3465.7 0.0 4247.4 4459.9 0.0 True False 0.0 4523.040416153303 4939.527608902513 7434.7720386623905 4082.8579662959187 3444.06928076386 0.0 4232.6667607506115 3650.094584929825 0.0 0.0 RLDPNKYPVPENWLHK ddPTM_KYSE-520_SHP099_60min_R1 2 RLDPNKYPVPENWLHK 16 2 P39748;P39748-2;I3L3E9 P39748 FEN1 Flap endonuclease 1 0 ; 125.52 0.00013743 1820250000.0 2017510.0 1760980.0 1685820.0 1379230.0 2304950.0 1656340.0 1504520.0 1471170.0 1667000.0 1159500.0 False True 1905594.6984935263 1676379.877515131 1794490.65460737 1510311.6045193812 2486336.451628473 1646002.1676718716 1656611.5643002007 1466066.8546436597 1364314.8216502639 1149227.7320773487 1.6581523794670057 1.4587012049255892 1.56147524508797 1.3141969710296981 2.1634845576987263 1.432268054214591 1.4414998159726817 1.2756974216011923 1.187157935341608 1.0 20.132233281480353 -7.430232813373117 1.1800710923347413 1.0388753495205874 1.6014078773368499 0.4863242012438689 0.21329626261200882 0.4298434492680969 1.0589489766030344 0.19360735641545063 0.06932360507444213 3.713361126152454e-08 7.430232813373117 0.5625325278162625 RLDSDAVNTIESQSVS(ph)PDHNKEPK ddPTM_KYSE-520_SHP099_60min_R1 5 RLDSDAVNTIESQSVSPDHNKEPK 24 2 Q3T7B4;Q9H3H1-6;Q9H3H1-3;Q9H3H1-2;Q9H3H1-5;Q9H3H1-4;Q9H3H1 Q3T7B4 TRIT1 tRNA dimethylallyltransferase, mitochondrial 1 RLDSDAVNTIES(0.005)QS(0.116)VS(0.879)PDHNKEPK;RLDSDAVNTIESQS(0.035)VS(0.965)PDHNKEPK;RLDSDAVNTIESQS(0.005)VS(0.995)PDHNKEPK;RLDSDAVNTIES(0.082)QS(0.061)VS(0.857)PDHNKEPK;RLDSDAVNTIESQS(0.004)VS(0.996)PDHNKEPK 332.07 1.2422999999999999e-72 8622450000.0 2056350.0 2143668.0 2057885.0 2593284.0 2114300.0 2035680.0 1722698.0 2012551.0 2496400.0 1920981.0 True False 1942280.1662679026 2040682.9715687346 2190539.559832416 2839748.9316607374 2280683.38127859 2022974.5660228466 1896845.125752286 2005569.9303139362 2043116.6891228096 1903962.602840604 1.0201251659933503 1.0718083267623806 1.1505160640047527 1.491494070011666 1.1978614379693906 1.0625075109168025 0.9962617558361183 1.0533662411865337 1.0730865648698118 1.0 20.86057371119153 -6.310040928657665 4.910974419115022 1.0356904295850942 1.195104746093972 0.2843821243481245 0.11851279625708645 0.3100226312096824 17.178480569099385 0.04690868288075583 0.04186731047388728 4.897326639464679e-07 6.310040928657665 0.15941431650887794 RLDVFEK ddPTM_KYSE-520_SHP099_60min_R1 2 RLDVFEK 7 1 A0A087WW66;Q99460-2;Q99460;C9J9M4;H7BZR6 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 0 ; 141.23 0.0039953 1922180000.0 3287400.0 2800880.0 1881870.0 1782980.0 2987060.0 2915250.0 2154270.0 2290010.0 2375750.0 2364970.0 False True 3105041.3687305683 2666321.520593406 2003178.351298459 1952433.8831275157 3222124.6279534693 2897054.8433929197 2372044.6352491127 2282066.4898023503 1944373.687783811 2344018.205718816 1.3246660632392049 1.137500346238033 0.854591635172119 0.8329431394193387 1.3746158711960061 1.2359352996170565 1.0119565750222927 0.973570292344437 0.8295045162362764 1.0 21.16055234437369 -7.117191275683291 3.0992006743703056 0.9239539577603195 1.1127669686101713 0.19940865435702826 0.1712201481262109 0.5051903772141618 9.151948299322946 0.10052260627888833 0.053403052165132726 7.634994425735472e-08 7.117191275683291 0.1888130108498518 RLEAAYLDLQR ddPTM_KYSE-520_SHP099_60min_R1 3 RLEAAYLDLQR 11 1 E5RIW3;E5RJD8;E5RHG6;O75347;O75347-2 E5RIW3 TBCA Tubulin-specific chaperone A 0 ;; 141.58 0.00022039 898780000.0 1396710.0 1182000.0 860742.0 773798.0 1300680.0 1139460.0 864919.0 923333.0 1075770.0 949165.0 False True 1319231.7120276438 1125214.9457818298 916226.8065558943 847339.5292691479 1403036.1161431358 1132348.2074787747 952353.4533159848 920130.1733305425 880437.285954833 940756.1365391962 1.4023099725724495 1.1960750529050077 0.9739259420900095 0.9007005071328003 1.4913919363891164 1.2036575298295658 1.0123276546666515 0.9780751223324129 0.9358825861011537 1.0 19.84346126944035 -6.833152912073725 4.801515886181668 0.9739869244698633 1.1848037750430551 0.28844214096331233 0.1641687364023476 0.3186537664284481 13.731322750833534 0.07570290648454807 0.0509116091628551 1.4684091699340164e-07 6.833152912073725 0.21081685057319177 RLEDAFIVIS(ph)DS(ph)DGEEPKEENGLQK ddPTM_KYSE-520_SHP099_60min_R1 6 RLEDAFIVISDSDGEEPKEENGLQK 25 2 Q96RL1-2;Q96RL1;D6RC40;D6RCQ3;Q96RL1-5;D6RDZ5 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 2 RLEDAFIVIS(1)DS(1)DGEEPKEENGLQK;RLEDAFIVIS(1)DS(1)DGEEPKEENGLQK;RLEDAFIVIS(1)DS(1)DGEEPKEENGLQK;RLEDAFIVIS(1)DS(1)DGEEPKEENGLQK;RLEDAFIVIS(1)DS(1)DGEEPKEENGLQK;RLEDAFIVIS(1)DS(1)DGEEPKEENGLQK 206.16 2.4481000000000003e-16 1789104000.0 2086400.0 2082910.0 1974880.0 1914640.0 1879960.0 1839190.0 1610140.0 1897510.0 2588910.0 1818890.0 True False 1970663.2328647147 1982843.8770883484 2102183.9247197197 2096606.8099424923 2027902.1564907967 1827710.9329971105 1772908.664652067 1890927.9806921654 2118829.2051101327 1802776.0496750048 1.0931270321790527 1.0998836363761353 1.1660815690882351 1.162987943133845 1.1248774670910324 1.0138313815110873 0.9834325594527827 1.0488978822594477 1.175314707277204 1.0 20.781788758057523 -6.2103188857689595 7.997125350786097 1.0435993628668072 1.1318906533661812 0.3881590356034571 0.05337704500455389 0.35963815618661504 51.89104687347917 0.018607460903179263 0.018556158630376303 6.161424259926589e-07 6.2103188857689595 0.08829129049937401 RLEEAHR ddPTM_KYSE-520_SHP099_60min_R1 3 RLEEAHR 7 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ;; 113.26 0.0069827 807030000.0 775790.0 672050.0 415640.0 383150.0 748190.0 716240.0 474420.0 600740.0 577930.0 518100.0 False True 732755.3822009761 639763.7092323839 442432.8194475131 419564.4608017517 807068.2963812258 711769.6804842616 522379.00349300896 598656.1731537702 472992.48042971716 513510.0370757008 1.4269543520002406 1.2458640786763646 0.8615855338817658 0.8170521129266655 1.571669954062162 1.3860871825166168 1.0172712620532491 1.1658120191047352 0.921096855522591 1.0 18.97003295019707 -7.529874688239435 1.8056209760521649 0.9673342521254129 1.1908451035060816 0.1274701860421389 0.22984897444765118 0.9130770732272574 5.337808552394056 0.22023993993655208 0.07144786087921505 2.9520608943684308e-08 7.529874688239435 0.22351085138066873 RLEEEEAAAEKEDR ddPTM_KYSE-520_SHP099_60min_R1 1 RLEEEEAAAEKEDR 14 2 Q5T280 Q5T280 C9orf114 Putative methyltransferase C9orf114 0 133.25 8.975700000000001e-06 441350000.0 241430.0 226350.0 181270.0 128800.0 221850.0 235680.0 177180.0 204740.0 210250.0 212290.0 False True 228037.3966212269 215475.80624172356 192954.95424225467 141041.1132748679 239308.33284616878 234209.03369894266 195091.0835101624 204029.8047266753 172073.89997118662 210409.27575912082 1.0837801508441431 1.024079406501085 0.9170458552556966 0.6703179447104487 1.1373468778065277 1.1131117335676213 0.9271981133260737 0.9696806568558849 0.8178056758684868 1.0 17.682838780762413 RLEEQAAQHK ddPTM_KYSE-520_SHP099_60min_R1 8 RLEEQAAQHK 10 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;;;;;; 173.28 7.2157e-05 15008024000.0 10461623.0 9572037.0 6913782.0 6423386.0 10512333.0 9533979.0 7412132.0 8672044.0 8269862.0 7191856.0 False True 9881295.917461593 9112181.974599548 7359455.450162323 7033862.674178584 11339593.800107129 9474473.900611052 8161422.63799722 8641962.703434296 6768263.527055969 7128141.751019297 1.386237291934971 1.278339052852946 1.0324507714945412 0.9867736809769205 1.5908204685303304 1.3291646310563674 1.1449579600223534 1.2123724534796925 0.9495130376844896 1.0 22.765094596063243 -7.714416612487376 4.939909137071398 0.9725293478704805 1.2436484327092348 0.3017508350828062 0.1647898832996172 0.2518491278580768 13.088408831029168 0.13621736201751802 0.045202962774661924 1.9301158960743017e-08 7.714416612487376 0.27111908483875424 RLEEWLGR ddPTM_KYSE-520_SHP099_60min_R1 2 RLEEWLGR 8 1 P56192;P56192-2 P56192 MARS Methionine--tRNA ligase, cytoplasmic 0 ; 193.1 1.1945e-05 1184990000.0 812900.0 686080.0 507000.0 444150.0 794520.0 726070.0 547010.0 536310.0 541990.0 589320.0 False True 767806.816524025 653119.6869729252 539682.0312286821 486361.88246143324 857044.2037995865 721538.3278080092 602307.1091031384 534449.6657856954 443578.2784560453 584099.0832840216 1.314514674817037 1.1181659168181608 0.9239563058280963 0.8326701691208389 1.4672924993837797 1.2353012501770304 1.031172837520553 0.9149982958042345 0.7594230005671021 1.0 19.15585359497609 -7.14643692866995 3.0752823861442646 0.8738968418223638 1.136576391857151 0.28913404098859563 0.17900712739391106 0.37534946749902487 6.715509787030767 0.10520751692360192 0.054629280018069715 7.137778574871304e-08 7.14643692866995 0.26267955003478716 RLEFLYDK ddPTM_KYSE-520_SHP099_60min_R1 2 RLEFLYDK 8 1 D6REX3;O94979-3;O94979-9;O94979-2;O94979;O94979-8;H7BXG7;O94979-7;O94979-6;O94979-10;O94979-4;H0Y8W8 D6REX3 SEC31A Protein transport protein Sec31A 0 ; 90.10799999999999 0.010767 936520000.0 1653080.0 1556560.0 1278760.0 939710.0 1788100.0 1844070.0 1373570.0 1267660.0 1532090.0 1636220.0 False True 1561380.357066719 1481780.5211558063 1361190.9156883406 1029019.7558658858 1928813.297102702 1832560.4751069644 1512423.860351359 1263262.7833340685 1253901.0768459227 1621724.3637598972 0.9627902200634927 0.9137067643975963 0.8393478855632894 0.634521980961147 1.1893595115207078 1.130007365035975 0.9326022930585258 0.7789626964752807 0.7731900098847919 1.0 20.62909720217849 -11.219104850355873 2.155052328613783 1.2719067733083218 0.9082933761501205 0.031054813673431436 0.15698057660457254 41789862.3104672 7114542.356825705 55417435.5161236 0.043769234749740454 6.0380283755104635e-12 11.219104850355873 -0.3636133971582013 RLEHQGIR ddPTM_KYSE-520_SHP099_60min_R1 1 RLEHQGIR 8 1 S4R3Q6;O75436-2;O75436 S4R3Q6 VPS26A Vacuolar protein sorting-associated protein 26A 0 103.19 0.0053181 166850000.0 90204.0 79058.0 60955.0 49478.0 82210.0 77978.0 67787.0 69294.0 75017.0 79667.0 False True 85200.20430278417 75259.93501152271 64884.25683144831 54180.374243896884 88679.45928908513 77491.3103775296 74639.5714973664 69053.6352873412 61395.80382467785 78961.21235998817 1.0790133757616602 0.9531253733593761 0.8217231586520948 0.6861644169910387 1.123076212214055 0.9813845059045293 0.9452688132127557 0.8745260264308274 0.7775438343673254 1.0 16.26885652046224 -7.283794886087218 8.87062792169541 0.8693763322153482 0.9359560342457148 0.0367521638823084 0.12605189243331913 1.2014508014676981 439.950284442718 0.07087114143320532 0.03488655604577187 5.2024164461071105e-08 7.283794886087218 0.06657970203036667 RLEHTER ddPTM_KYSE-520_SHP099_60min_R1 1 RLEHTER 7 1 A0A087WZ13;Q8IY67-2;E9PAU2;Q8IY67;Q8IY67-3;K7EKR9 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 0 78.516 0.041846 54883000.0 49215.0 49498.0 18323.0 10483.0 54883.0 55450.0 24231.0 29296.0 32839.0 42222.0 False True 46484.94584232981 47120.04178198728 19504.129897836567 11479.301168171125 59201.97985844621 55103.91598186687 26680.50595177076 29194.3790137378 26876.26540382307 41847.94592821895 1.110805914394571 1.1259821894917248 0.4660713797349017 0.2743097878175758 1.414692610241715 1.316765130512873 0.6375583164233525 0.6976299162643349 0.642236191232025 1.0 15.35286919057121 -4.636947768442704 20.45259285573551 0.8093068049020214 1.1188444848822234 0.1208116637326263 0.33681183153454997 5.350815012054103 928.0269244728614 0.0932950961081506 0.24683625477228685 2.307024632363695e-05 4.636947768442704 0.309537679980202 RLEIS(ph)PDS(ph)S(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 RLEISPDSSPER 12 1 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 3 RLEIS(1)PDS(1)S(1)PER 44.567 0.047452 0.0 285790.0 282380.0 225860.0 227280.0 293840.0 245220.0 219360.0 274550.0 344700.0 269070.0 True False 269936.6589917597 268814.040938979 240419.29698877726 248880.62286577615 316963.53627910005 243689.49102025977 241535.04954729244 273597.650130452 282111.16917987156 266686.24913329264 1.012188141942191 1.0079786333663678 0.9015061622791549 0.9332338044223005 1.1885259825326737 0.9137684894224192 0.9056899271419526 1.0259158506282975 1.0578392027962018 1.0 18.024783913054 -7.49089151789567 24.653549394688802 1.0332389815257523 0.9809032927782543 0.06725495013588878 0.08078948853616226 1533.8131196725278 1182162.3554833767 0.04571185958243537 0.02192758060583563 3.229300665651615e-08 7.49089151789567 -0.052335688747498055 RLEIS(ph)PDS(ph)SPER ddPTM_KYSE-520_SHP099_60min_R1 2 RLEISPDSSPER 12 1 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 2 RLEIS(1)PDS(0.903)S(0.097)PER;RLEIS(0.996)PDS(0.821)S(0.183)PER 82.171 0.014145 1877560000.0 2758000.0 2964600.0 2644300.0 2821200.0 2911300.0 2649800.0 2515100.0 2902500.0 3822500.0 2452300.0 True False 2605008.2420633077 2822176.166044676 2814755.809029594 3089325.9997752937 3140402.7469689045 2633261.6153065967 2769350.853010553 2892431.904948594 3128430.357383409 2430574.5298605287 1.0717664527706494 1.1611148439898358 1.1580619209364917 1.2710270604014622 1.2920413294831603 1.0833906070173864 1.139381170578408 1.1900198366328507 1.2871155847925901 1.0 21.21286594217177 -10.105531595466475 4.2462381214710385 0.9999730504087633 1.18402332909736 0.3525286585475086 0.07471397175954407 26431962.634602204 0.5888095687193786 7569.95069995346 0.01890583642906429 7.842750598153945e-11 10.105531595466475 0.1840502786885968 RLEIS(ph)PDSS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 3 RLEISPDSSPER 12 1 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 2 RLEIS(0.998)PDS(0.004)S(0.998)PER;RLEIS(0.998)PDS(0.265)S(0.738)PER;RLEIS(0.942)PDS(0.104)S(0.954)PER 174.4 1.7101e-06 3194570000.0 3998000.0 4013950.0 4059450.0 4144700.0 4361400.0 4364940.0 4004630.0 4492000.0 5543070.0 3903970.0 True False 3776222.9701845893 3821113.816938219 4321128.642349653 4538611.041850503 4704617.367028543 4337696.790367721 4409457.081822455 4476418.300440682 4536588.21742348 3869383.8630426973 0.9759235846957683 0.9875251337647021 1.116748504489737 1.172954455410779 1.2158569771180723 1.1210303613962882 1.1395760249940852 1.156881420630271 1.1724316785298539 1.0 21.883672428071026 -4.800162308020938 3.604680607780737 1.1485519372221686 0.9763578355493867 0.5725362546650005 0.05360197109056316 0.13595535116283824 3.626217565232159 0.013496940199940938 0.03460704785059417 1.5843009841206718e-05 4.800162308020938 -0.17219410167278193 RLEIS(ph)PDSSPER ddPTM_KYSE-520_SHP099_60min_R1 4 RLEISPDSSPER 12 1 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 RLEIS(0.444)PDS(0.278)S(0.278)PER;RLEIS(0.999)PDS(0.001)SPER;RLEIS(0.429)PDS(0.194)S(0.377)PER;RLEIS(0.485)PDS(0.485)S(0.03)PER 139.21 7.698899999999999e-05 519170000.0 3245940.0 3436380.0 2841470.0 2859580.0 3191840.0 3364980.0 2765400.0 3316210.0 4303260.0 3388750.0 True False 3065881.237579028 3271291.1466884636 3024635.7027127487 3131353.6234359215 3443019.648914652 3343977.9116440495 3044953.619703148 3304706.8415192324 3521896.460356763 3358728.3114076043 0.9128101332775418 0.9739671814412114 0.900530028713504 0.9323033401661498 1.0250962059719924 0.9956083379196059 0.9065793173449754 0.9839160941643023 1.0485803357166383 1.0 21.679483669559424 -5.708294153982575 0.3358981224177165 1.010914650433755 0.9046249234998323 0.30737457798914825 0.04117125914859271 3.943346505782114 0.72501724541725 0.05076400000803815 0.15883784522182512 1.957518368671336e-06 5.708294153982575 -0.10628972693392269 RLELGNLGNPQMSQQTSCASLDS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 1 RLELGNLGNPQMSQQTSCASLDSPGR 26 1 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 RLELGNLGNPQMSQQTSCASLDS(1)PGR 173.23 1.4285e-10 461130000.0 111430.0 128700.0 98398.0 118670.0 118750.0 100740.0 81343.0 85445.0 151720.0 108410.0 True False 105248.7557698022 122517.05881736158 104740.89252236641 129948.3611205636 128094.9494049248 100111.2442923943 89565.94427117695 85148.611238013 124171.47254995695 107449.57174170368 0.9795176850291039 1.1402284516487269 0.9747911585366891 1.2093892885207993 1.1921401577369728 0.931704451396513 0.8335625988950714 0.7924518437607215 1.1556255696248914 1.0 16.713300207110823 -6.3196207670880655 9.768285984629303 0.922626174504416 1.1006412302773134 0.30114266032428305 0.1172624632318502 0.6557787618121508 107.42359496295731 0.04136788609132777 0.03648972447907303 4.790482223335177e-07 6.3196207670880655 0.17801505577289745 RLELLPSAES(ph)PVCWLEQPESHQR ddPTM_KYSE-520_SHP099_60min_R1 1 RLELLPSAESPVCWLEQPESHQR 23 1 O95402;B8ZZF3 O95402 MED26 Mediator of RNA polymerase II transcription subunit 26 1 RLELLPS(0.018)AES(0.982)PVCWLEQPESHQR 168.22 1.1018e-10 173440000.0 43066.0 50097.0 48900.0 47699.0 49986.0 37715.0 38815.0 40204.0 57100.0 45280.0 True False 40677.043130057435 47690.264922869974 52052.17224276636 52232.298618772744 53919.6138185648 37479.6066953311 42738.79899789455 40064.54170768414 46732.07937386329 44878.85442730692 0.9063743638096774 1.0626444353680389 1.159837364545 1.1638509780452764 1.2014480874484388 0.8351284179064588 0.9523148383192634 0.8927264792950359 1.0412939450038359 1.0 15.453748229891508 -6.260320417407127 24.99710786842455 0.9380895236672323 1.103822135685222 0.41331764279580674 0.09181418931047779 102.54403438940884 2290803.2801790754 0.03246748593379751 0.030748315658818956 5.491355785351563e-07 6.260320417407127 0.16573261201798972 RLEQTSVRDPS(ph)PEADAPVLGSPEK ddPTM_KYSE-520_SHP099_60min_R1 1 RLEQTSVRDPSPEADAPVLGSPEK 24 2 O15234 O15234 CASC3 Protein CASC3 1 RLEQT(0.002)S(0.003)VRDPS(0.995)PEADAPVLGSPEK 135.86 1.006e-06 412410000.0 134420.0 123990.0 105040.0 103150.0 92432.0 106750.0 101760.0 118030.0 153340.0 118610.0 True False 126963.45464037327 118033.33428721582 111811.0464699422 112953.34498682167 99705.87253386113 106083.7336530982 112046.89388189475 117620.58147840899 125497.32138683362 117559.20767718369 1.079995834856369 1.0040330878320827 0.9511041174841373 0.9608209107447401 0.8481332471009193 0.9023855787153907 0.9531103185857999 1.0005220671560993 1.0675243893396076 1.0 16.843028015128947 -9.734147455620246 9.404587063396484 0.9999946426947279 0.9683234700901361 0.00657344751326483 0.0663333970290651 0.0 0.0 0.06991937265857592 0.016957938749896005 1.8443890890652965e-10 9.734147455620246 -0.031671172604591846 RLERPQDRDT(ph)PVQNK ddPTM_KYSE-520_SHP099_60min_R1 1 RLERPQDRDTPVQNK 15 3 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 RLERPQDRDT(1)PVQNK 141.22 7.2358e-06 423240000.0 342490.0 298800.0 303190.0 322470.0 281850.0 301600.0 258670.0 320370.0 381670.0 207080.0 True False 323491.3969631116 284445.19949205645 322734.1125211519 353117.45184585935 304029.9914928677 299717.6025271608 284818.88797592104 319258.71124492027 312368.3491177303 205245.43230580195 1.5761198353059136 1.3858783423167838 1.5724301822234936 1.720464362489383 1.4812996717017477 1.4602887828490216 1.3876990331826726 1.5554972778602263 1.5219259479174296 1.0 17.646990589920552 -11.660197534073307 0.4243011727026341 4.6160773580232586e-11 1.5273846581210788 0.7342027180536268 0.09355820653415345 57.0179495026764 2.43234726968447 52.21578462509693 0.05841275182868696 2.186766770878957e-12 11.660197534073307 1.527384658074918 RLFDANK ddPTM_KYSE-520_SHP099_60min_R1 2 RLFDANK 7 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YXP8;A0A2R8Y6C7;K7ERC6;A0A0J9YYH3;A0A0J9YX90;K7EP41;K7EPY4;K7ERK8;A0A2R8YF08;K7ELR7;A0A0J9YYI8;K7EIL4;A0A0J9YXM3;A0A0J9YXH9;K7ENA0 P06744-2 GPI Glucose-6-phosphate isomerase 0 ; 171.38 0.0014194000000000001 1127410000.0 1534460.0 1449010.0 991130.0 860990.0 1376310.0 1298280.0 997800.0 1159980.0 1120550.0 1177650.0 False True 1449340.444929827 1379397.384591647 1055019.8256640693 942818.2307339169 1484617.766867302 1290176.952947486 1098667.3615895691 1155956.3001213686 917086.3667667693 1167216.9371978368 1.241706146253575 1.1817832149550507 0.9038763849648022 0.8077489288301121 1.2719295955655476 1.105344612326173 0.9412709210912958 0.9903525756715783 0.7857034434133886 1.0 20.154641292437336 -4.653242467506015 5.669878234851713 0.9838732178871117 1.2254633568738913 0.3358262264504246 0.13314169026435474 0.2426110965652499 10.967450580019248 0.03602712959152029 0.09866303378371698 2.2220689585882724e-05 4.653242467506015 0.2415901389867796 RLFDDEAS(ph)VDEPR ddPTM_KYSE-520_SHP099_60min_R1 6 RLFDDEASVDEPR 13 1 A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35;A0A0U1RR46;Q8NI35-5 A0A0X1KG69 INADL InaD-like protein 1 RLFDDEAS(1)VDEPR;RLFDDEAS(1)VDEPR;RLFDDEAS(1)VDEPR;RLFDDEAS(1)VDEPR;RLFDDEAS(1)VDEPR;RLFDDEAS(1)VDEPR 175.39 2.6351999999999997e-07 2432380000.0 2289610.0 2013780.0 2099460.0 1957520.0 1903650.0 2021210.0 1790180.0 1989260.0 2505020.0 2065560.0 True False 2162600.7690756246 1917034.9860545965 2234794.550854768 2143562.1122501525 2053456.424713138 2008594.878660221 1971148.8648731355 1982359.7213567747 2050171.514415324 2047260.745381363 1.0563387071991048 0.9363902426104946 1.091602306104136 1.047039131232329 1.003026326444129 0.9811133648665064 0.9628225761276689 0.9682986037948486 1.0014217871565836 1.0 20.96526342943447 -6.015650652230536 3.79051425724779 0.9800070930980828 1.030022228302164 0.2692076493737081 0.03856187694720997 0.31943730581937096 10.080560684750337 0.012930568728800494 0.01381919997408459 9.646046424627444e-07 6.015650652230536 0.050015135204081296 RLGDSS(ph)LSR ddPTM_KYSE-520_SHP099_60min_R1 4 RLGDSSLSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RLGDS(0.208)S(0.757)LS(0.035)R;RLGDS(0.016)S(0.916)LS(0.068)R;RLGDS(0.103)S(0.872)LS(0.026)R;RLGDS(0.001)S(0.5)LS(0.5)R 127.52 0.00066212 2635470000.0 4124380.0 3873780.0 4197970.0 3472490.0 3249520.0 3430920.0 2928460.0 3450630.0 4439800.0 3491970.0 True False 3895592.4196523046 3687677.7941376767 4468577.863189491 3802514.4055578145 3505238.7367603467 3409506.355644845 3224497.3158153845 3438660.5699130953 3633644.238250054 3461033.8625115515 1.1255574416210448 1.0654844594504076 1.2911107029582196 1.098664317256481 1.0127721588417853 0.9851121055402461 0.9316572573131311 0.9935356620341701 1.0498724897228382 1.0 21.722771626123258 -5.691852982600106 3.4392597134522362 0.9898559186620847 1.1565443310023311 0.613933302228475 0.05941926534680068 0.1593503506084584 3.772840710011246 0.018820511077759804 0.02430107869872892 2.033045121043723e-06 5.691852982600106 0.16668841234024645 RLGGLRPESPESLT(ph)SVSR ddPTM_KYSE-520_SHP099_60min_R1 1 RLGGLRPESPESLTSVSR 18 2 Q9H6F5;H0YG79 Q9H6F5 CCDC86 Coiled-coil domain-containing protein 86 1 RLGGLRPES(0.169)PES(0.08)LT(0.742)S(0.007)VS(0.002)R 106.35 0.0007218999999999999 996140000.0 113610.0 173990.0 231670.0 87207.0 112560.0 120550.0 82599.0 80445.0 228830.0 81175.0 True False 107307.82682407994 165631.25923568557 246603.81888510592 95495.1270602594 121417.83162120705 119797.60273424808 90948.91300855568 80165.95507100414 187280.2403348713 80455.85265319432 1.3337479286513971 2.058660169194162 3.0650824116934525 1.1869257973300216 1.5091236699035397 1.4889855589578638 1.1304201000838534 0.9963968117591172 2.327739178181909 1.0 16.295909751233076 -5.326959926402558 24.99996944980373 1.3768204095370808 2.14313402355587 0.30846809896814864 0.5319825836247989 231.3656366429804 88279.01451835723 0.1486958533475532 0.22055162533359698 4.71020786830745e-06 5.326959926402558 0.7663136140187892 RLGS(ph)VEAPK ddPTM_KYSE-520_SHP099_60min_R1 6 RLGSVEAPK 9 1 P46087-2;P46087;P46087-4;P46087-3;F5H359;F5GWB7;F5H709;F5H5X6 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 RLGS(1)VEAPK;RLGS(1)VEAPK;RLGS(1)VEAPK;RLGS(1)VEAPK;RLGS(1)VEAPK;RLGS(1)VEAPK 132.69 0.00056157 5372660000.0 3735940.0 4087700.0 4216510.0 4008410.0 4281060.0 5513340.0 6282470.0 8408890.0 8720050.0 7232990.0 True False 3528699.9607882514 3891320.756237207 4488312.981254532 4389368.081227593 4617955.066100607 5478929.199990374 6917563.378598548 8379721.52323967 7136708.734571914 7168911.335781074 0.49222256985882906 0.5428049774887105 0.626080135606185 0.6122781933875541 0.6441640647795048 0.7642623744897283 0.9649391734100529 1.1688973584336673 0.9955080207160002 1.0 22.773322618555465 -6.596530162148471 1.536386999409024 1.0701248726359776 0.5731946470528854 0.9273930877373303 0.05963906735298554 0.0951846716676654 0.45761476907972737 0.03180786312928371 0.022034003413894394 2.5320357769765617e-07 6.596530162148471 -0.4969302255830922 RLHGLDEEAEQK ddPTM_KYSE-520_SHP099_60min_R1 1 RLHGLDEEAEQK 12 1 A0A3B3ITP6;A0A3B3IS57;A0A3B3IT92;P33991;A0A3B3IU45;E5RG31 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 0 98.156 0.0034163000000000006 281820000.0 314980.0 262610.0 218160.0 165030.0 321870.0 264990.0 210000.0 226500.0 247320.0 227140.0 False True 297507.4315029371 249993.82141435368 232222.94266834194 180714.40158192103 347199.33781021566 263336.0991169507 231228.84940249534 225714.3243654976 202412.92242983996 225127.7163122457 1.321505127739593 1.1104533262693403 1.0315164497393798 0.8027194720497024 1.5422327534680809 1.1697186975934633 1.0271007639138823 1.0026056678531678 0.8991026326989389 1.0 17.780384157726896 -6.917499448971994 3.5796270521287092 0.9697331100799096 1.1549276927021574 0.1977476113875456 0.18068973992082424 0.4472443208903604 11.291918136345522 0.08663616666483072 0.055113946120195025 1.209206717170262e-07 6.917499448971994 0.18519458262224786 RLHIEDYSVS(ph)QT(ph)T(ph)LDQVFVNFAK ddPTM_KYSE-520_SHP099_60min_R1 1 RLHIEDYSVSQTTLDQVFVNFAK 23 1 O95477 O95477 ABCA1 ATP-binding cassette sub-family A member 1 3 RLHIEDY(0.124)S(0.412)VS(0.481)QT(0.992)T(0.991)LDQVFVNFAK 45.957 0.06055599999999999 336480000.0 301980.0 251240.0 373950.0 168810.0 410290.0 283010.0 200650.0 226420.0 298880.0 323030.0 True False 285228.5674177945 239170.05328107186 398055.4153411552 184853.65164542288 442577.4887692347 281243.6296127705 220933.6601552889 225634.60186682502 244610.92615166816 320168.2055135372 0.8908709937649776 0.7470137545277254 1.2432696579058808 0.5773641743999061 1.382328042409326 0.8784246054715732 0.6900549659542864 0.7047376909425344 0.7640075495920085 1.0 18.288470521749343 -6.52670545275326 24.478274054778705 0.7678297758526095 0.9675469794452755 0.11733765179052702 0.22776527648885012 170.6880446070227 1091812.6816738318 0.08271372581090868 0.06438744478526334 2.9736821589815547e-07 6.52670545275326 0.19971720359266598 RLHPPS(ph)PVPQGVCPAHR ddPTM_KYSE-520_SHP099_60min_R1 2 RLHPPSPVPQGVCPAHR 17 1 Q96F44-2;Q96F44-3;Q96F44 Q96F44-2 TRIM11 E3 ubiquitin-protein ligase TRIM11 1 RLHPPS(1)PVPQGVCPAHR;RLHPPS(1)PVPQGVCPAHR 137.12 8.363e-06 5742800000.0 2362260.0 1966350.0 2069590.0 1630430.0 2017310.0 2174470.0 1776170.0 1833590.0 2562870.0 1828620.0 True False 2231220.728751439 1871883.5944484766 2202999.0828610775 1785385.576993347 2176060.820076198 2160898.326151309 1955722.5973487159 1827229.7042531234 2097517.412695147 1812419.8494448338 1.231072772368328 1.0328090342984586 1.2155015205422093 0.9850838797314166 1.2006383734666952 1.1922724896293861 1.0790670814755077 1.0081713157207068 1.1573021633688476 1.0 20.789485765629546 -13.99999999980127 0.12393263423949769 0.5946738910471152 1.1743484770068928 0.1830360107060951 0.08478906198741973 268.07877551084056 2.1282358739784737 26.869121200258938 0.7242495876246972 1.0000000004575925e-14 13.99999999980127 0.5796745859597776 RLHPPS(ph)PVPQGVCPAHREPLAAFCGDELR ddPTM_KYSE-520_SHP099_60min_R1 3 RLHPPSPVPQGVCPAHREPLAAFCGDELR 29 2 Q96F44-2;Q96F44-3;Q96F44 Q96F44-2 TRIM11 E3 ubiquitin-protein ligase TRIM11 1 RLHPPS(1)PVPQGVCPAHREPLAAFCGDELR;RLHPPS(1)PVPQGVCPAHREPLAAFCGDELR;RLHPPS(1)PVPQGVCPAHREPLAAFCGDELR 198.52 7.923899999999999e-16 3884650000.0 243276.0 254116.0 317261.0 216349.0 192838.0 182140.0 182987.0 179203.0 306660.0 204263.0 True False 229780.9953213172 241907.88592410766 337712.1516955478 236910.74391230146 208013.25350186843 181003.19669859766 201485.11174102104 178581.38661929473 250978.27426950823 202453.38873420947 1.1349822137232028 1.1948818808940558 1.6680982907078554 1.1701989548978569 1.0274624435897106 0.8940487379849559 0.9952172843376822 0.8820864285642803 1.2396842346709471 1.0 17.62723026597735 -5.602533267483916 4.049239555706452 0.995535445397582 1.332468093893384 0.4509575240614243 0.16051523373217325 0.19416167381860083 6.139931954447824 0.049030609416459515 0.06510026136361922 2.497277087374305e-06 5.602533267483916 0.33693264849580196 RLIS(ph)PYK ddPTM_KYSE-520_SHP099_60min_R1 4 RLISPYK 7 1 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 1 RLIS(0.999)PY(0.001)K;RLIS(0.996)PY(0.004)K;RLIS(0.999)PY(0.001)K;RLIS(0.978)PY(0.022)K 81.97200000000001 0.014228999999999999 5798240000.0 5024910.0 4760130.0 3995030.0 3887360.0 4171340.0 4235610.0 3863260.0 3912720.0 4839080.0 4073180.0 True False 4746168.225390258 4531446.2096992005 4252556.026074005 4256813.525622595 4499600.726322017 4209173.98687025 4253796.0225842055 3899147.6875557154 3960425.0552797606 4037094.794086084 1.1756395297784168 1.1224522684821 1.0533703673006514 1.0544249621927075 1.1145640505923853 1.0426245113283552 1.053677518005167 0.9658301046751624 0.9810086850279968 1.0 21.944886032127805 -1.0000000000000004 0.2086030163520726 0.9714470198824098 1.9481660919873711 0.7362942307306144 0.032168830138481486 28.794735982729463 0.35671764978762743 0.060311344528384825 9.315545912398871 0.0999999999999999 1.0000000000000004 0.9767190721049613 RLIS(ph)PYKK ddPTM_KYSE-520_SHP099_60min_R1 2 RLISPYKK 8 2 O14929-2;O14929 O14929-2 HAT1 Histone acetyltransferase type B catalytic subunit 1 RLIS(0.996)PY(0.004)KK;RLIS(1)PYKK 72.434 0.015216999999999998 1296000000.0 2058610.0 1542360.0 375750.0 3923400.0 898950.0 1499880.0 1343700.0 3360200.0 778370.0 556810.0 True False 1944414.7995627054 1468262.7104704399 399971.4462212567 4296278.756386773 969692.2506741664 1490518.6925677622 1479534.3092482504 3348544.250476577 637037.6291109272 551877.0965916249 3.523275039988701 2.6604885753338614 0.724747319088738 7.784846993869562 1.7570800757323584 2.700816362507445 2.680912685787844 6.067554299964753 1.1543106844716895 1.0 19.073987488034327 -7.953389196858674 24.99969495483835 0.9999538005178327 3.4134370225658643 0.19703956635335151 1.9429243470816218 166.07143371284613 89072.0745967156 1.8176162873429733 0.46930651775090987 1.1132963959566753e-08 7.953389196858674 2.413483222048032 RLKEDILENEDEQNS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 5 RLKEDILENEDEQNSPPK 18 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 RLKEDILENEDEQNS(1)PPK;RLKEDILENEDEQNS(1)PPK;RLKEDILENEDEQNS(1)PPK;RLKEDILENEDEQNS(1)PPK;RLKEDILENEDEQNS(1)PPK 151.82 1.6868999999999999e-06 3475120000.0 3131310.0 3208200.0 2996930.0 2488100.0 2741120.0 2625190.0 2356220.0 2588900.0 3445500.0 2647600.0 True False 2957609.9921882683 3054073.256393624 3190116.903057543 2724568.2759254607 2956830.549160654 2608805.2154452153 2594409.712091177 2579919.7101538014 2819884.0539867934 2624144.323801628 1.1270759635291496 1.1638358563941915 1.2156789068811522 1.0382692183554705 1.1267789360293492 0.9941546247219396 0.9886688352310691 0.9831470345412413 1.074591831100812 1.0 21.323415637415472 -5.798283494287611 1.2556668791196366 1.0066563669008768 1.163981381271066 0.6429903029652204 0.04717351768706452 0.2721992079326708 0.9038413673865583 0.01902969127249476 0.026369639842489707 1.5911697205581547e-06 5.798283494287611 0.1573250143701892 RLKEDILENEDEQNS(ph)PPKK ddPTM_KYSE-520_SHP099_60min_R1 3 RLKEDILENEDEQNSPPKK 19 3 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 RLKEDILENEDEQNS(1)PPKK;RLKEDILENEDEQNS(1)PPKK;RLKEDILENEDEQNS(1)PPKK 225.34 3.393e-19 4696940000.0 3545950.0 3782150.0 3623560.0 3108760.0 3248460.0 3234240.0 3032310.0 3061690.0 4120770.0 3099750.0 True False 3349249.084823921 3600449.836877107 3857140.4755009953 3404215.615717221 3504095.320790918 3214053.9084795895 3338845.48729372 3051069.711993821 3372542.0441582287 3072288.626569008 1.0901479294164524 1.1719113255638112 1.255461626275808 1.1080389994213837 1.1405488698189572 1.0461432173672103 1.0867616598321983 0.9930934501427741 1.097729560625471 1.0 21.550882325930047 -6.143578921334653 1.4151344004796385 1.0405268620164616 1.1685949346918154 0.5314352976292769 0.051062049349299886 0.322455797810504 1.3077298523963248 0.022200520890654538 0.022092895756176085 7.184905801888539e-07 6.143578921334653 0.1280680726753538 RLKS(ph)DERPVHIK ddPTM_KYSE-520_SHP099_60min_R1 1 RLKSDERPVHIK 12 3 H0Y612;Q9UPN9-2;Q9UPN9 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 1 RLKS(1)DERPVHIK 112.17 0.00010816 785350000.0 507720.0 510690.0 608130.0 493810.0 585520.0 498270.0 585540.0 628590.0 977930.0 466430.0 True False 479555.7594852729 486155.68583868205 647331.0328424027 540741.5539306093 631597.0928469184 495160.11210612813 644732.0975196998 626409.5680040093 800362.5636091434 462297.79307704844 1.0373308431635715 1.0516071958787339 1.4002468593539572 1.1696823173899233 1.3662126497360412 1.0710847413100297 1.3946250818728139 1.3549914738606796 1.7312705697380468 1.0 18.818462949871584 -3.019280363635455 0.49147277673837836 1.3484176847050446 2.757512159896349e-15 0.18465403289571858 0.19877464822615484 22.332074267083815 1.6175269413134075 0.11335629334054557 22.650944003909235 0.0009565763434228361 3.019280363635455 -1.348417684705042 RLKS(ph)EDELRPEVDEHTQK ddPTM_KYSE-520_SHP099_60min_R1 3 RLKSEDELRPEVDEHTQK 18 3 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;H0YCR2;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 RLKS(1)EDELRPEVDEHTQK;RLKS(1)EDELRPEVDEHTQK;RLKS(1)EDELRPEVDEHTQK 244.78 6.101499999999999e-24 14046000000.0 5534810.0 5318300.0 5831160.0 6159480.0 7440880.0 10339800.0 10743810.0 12235990.0 18056700.0 9979110.0 True False 5227783.055929811 5062800.885068958 6207045.903785879 6744875.127284804 8026434.923184149 10275265.472845936 11829899.16428105 12193546.206591532 14778058.452364927 9890702.849030107 0.5285552640419738 0.511874733509502 0.6275636826350058 0.681940932837368 0.8115130992911418 1.0388812230723865 1.1960625392199606 1.2328290913913407 1.4941363296354697 1.0 23.23764161414893 -6.1811786968274 1.0303766904741956 1.2786675519683017 0.5392575589693778 0.8661128506524685 0.11555945116592271 0.1640748097134947 0.3690328346295321 0.059980165899040774 0.058850206985003733 6.589027242800667e-07 6.1811786968274 -0.739409992998924 RLLEDGEDFNLGDALDS(ph)SNSMQTIQK ddPTM_KYSE-520_SHP099_60min_R1 1 RLLEDGEDFNLGDALDSSNSMQTIQK 26 1 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 1 RLLEDGEDFNLGDALDS(0.587)S(0.399)NS(0.013)MQTIQK 177.78 7.7362e-11 168400000.0 86044.0 83376.0 86613.0 74837.0 67559.0 53749.0 46425.0 61292.0 119990.0 65133.0 True False 81270.96779553844 79370.4918100726 92196.21256569994 81949.4859794355 72875.50894187213 53413.532553820776 51118.092064337325 61079.39235766033 98202.84070174879 64555.97229270723 1.2589225273696245 1.2294833303755994 1.4281593056590858 1.2694330682196724 1.1288732297523578 0.8273987774769339 0.7918414090730385 0.9461462694840451 1.5212045797479623 1.0 15.97826294988443 -5.894590576223906 3.468282575624314 0.9980999936106735 1.3022038065259522 0.31246358189218093 0.19330564422541785 0.29006148240032253 6.827489969996358 0.0654476328916011 0.07537105722879407 1.2747042205911893e-06 5.894590576223906 0.30410381291527877 RLLEDGEDFNLGDALDSSNS(ph)MQTIQK ddPTM_KYSE-520_SHP099_60min_R1 1 RLLEDGEDFNLGDALDSSNSMQTIQK 26 1 P05783 P05783 KRT18 Keratin, type I cytoskeletal 18 1 RLLEDGEDFNLGDALDS(0.099)S(0.389)NS(0.489)MQT(0.023)IQK 114.63 0.00024391 227680000.0 112470.0 116670.0 83296.0 67169.0 75159.0 62647.0 65389.0 59704.0 119020.0 70077.0 True False 106231.06489661337 111064.99807475966 88665.39343831211 73552.72156490377 81073.58570378723 62255.99683527528 71999.15825514166 59496.90075901834 97408.96825003877 69456.17229908105 1.529469036087652 1.5990659202541329 1.2765660776196446 1.0589803487612708 1.1672625055507109 0.8963349803844426 1.036612814554629 0.8566107055658395 1.4024522951047729 1.0 16.083815286133344 -4.983668413481359 2.2994478605102553 1.0476559672415993 1.5757003402739975 0.6577920024119991 0.14439957218135333 0.1701258128771431 1.7810838569735408 0.03967382267700054 0.10021511304186025 1.0383208776563395e-05 4.983668413481359 0.5280443730323983 RLLEDS(ph)DS(ph)EDEAAPSPLQPALRPNPTAILDEAPKPK ddPTM_KYSE-520_SHP099_60min_R1 3 RLLEDSDSEDEAAPSPLQPALRPNPTAILDEAPKPK 36 3 Q9BW85 Q9BW85 CCDC94 Coiled-coil domain-containing protein 94 2 RLLEDS(1)DS(0.999)EDEAAPS(0.001)PLQPALRPNPTAILDEAPKPK;RLLEDS(1)DS(0.999)EDEAAPS(0.001)PLQPALRPNPTAILDEAPKPK;RLLEDS(1)DS(1)EDEAAPSPLQPALRPNPTAILDEAPKPK 200.48 1.8307000000000003e-15 5185200000.0 1510950.0 1331720.0 1196050.0 1243790.0 1283780.0 1165650.0 1002450.0 1185890.0 1610400.0 1171840.0 True False 1427134.5914958497 1267742.1722475286 1273149.2967476628 1361999.4276409 1384806.1822909834 1158374.7459740874 1103787.428969197 1181776.4243788067 1317991.9548803743 1161458.4092777236 1.2287436038138826 1.091508884107094 1.0961643452557173 1.1726631076595218 1.192299415311955 0.9973450075534311 0.9503460650438696 1.0174935365216549 1.1347732681189973 1.0 20.147506062856962 -6.26740063016315 24.973952952655996 1.0167320723105044 1.1502485789637875 0.5774584927841997 0.05814192951864217 383.3635538929908 1606050.9996933357 0.021109589045994196 0.019100281303311296 5.402557151860098e-07 6.26740063016315 0.13351650665328307 RLNHS(ph)PPQSSSR ddPTM_KYSE-520_SHP099_60min_R1 9 RLNHSPPQSSSR 12 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 RLNHS(0.982)PPQS(0.013)S(0.004)S(0.001)R;RLNHS(1)PPQSSSR;RLNHS(0.999)PPQS(0.001)SSR;RLNHS(0.954)PPQS(0.038)S(0.008)SR;RLNHS(0.952)PPQS(0.044)S(0.004)SR;RLNHS(0.983)PPQS(0.016)S(0.001)SR;RLNHS(1)PPQSSSR;RLNHS(0.962)PPQS(0.036)S(0.002)SR;RLNHS(0.999)PPQS(0.001)SSR 143.97 1.9121e-05 43259006000.0 1095886.0 1208641.0 1217048.0 1354639.0 1054000.0 1039606.0 916479.0 914871.0 1223602.0 892243.0 True False 1035095.018985419 1150576.0721528733 1295500.8614256508 1483383.4832729332 1136943.8035603424 1033117.4333317358 1009125.6412930924 911697.5260334958 1001426.721296285 884338.42117455 1.170473875386573 1.3010585592614137 1.4649378907511539 1.6773934590592035 1.2856433423420528 1.1682376436382604 1.1411079934227035 1.030937369907109 1.1324021407621554 1.0 19.754239044413325 -6.267078442804194 2.566257199948187 1.0868675280963924 1.4050019418348907 0.5640074320620982 0.1287651003407917 0.23677428647548626 3.089552311910298 0.05306714363311061 0.048947241459414634 5.406566600540445e-07 6.267078442804194 0.31813441373849827 RLNHSPPQSS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 RLNHSPPQSSSR 12 1 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 1 RLNHS(0.004)PPQS(0.016)S(0.49)S(0.49)R 65.043 0.032643 348200000.0 267910.0 342900.0 354270.0 439370.0 299830.0 304380.0 254290.0 275590.0 395520.0 288050.0 True False 253048.49823465542 326426.5692966071 377106.81105204206 481127.5926985923 323424.91520066216 302480.25151597214 279996.11483124085 274634.04261318955 323703.538247818 285498.101099509 0.8863403898663991 1.143358110052132 1.3208732723605867 1.6852216909523248 1.1328443655319933 1.0594825336878304 0.9807284663292718 0.9619470026438711 1.133820284622463 1.0 18.12312162442622 -5.994428317631646 24.99981534391735 1.0301631375064604 1.2743548397076019 0.2483207838435325 0.18928876466136396 222.29508928357797 997413.6750714164 0.06346980459579404 0.07175778172755216 1.0129119209445954e-06 5.994428317631646 0.2441917022011415 RLNKHEENLK ddPTM_KYSE-520_SHP099_60min_R1 2 RLNKHEENLK 10 2 P42766 P42766 RPL35 60S ribosomal protein L35 0 ; 117.7 0.00079197 12403300000.0 17978000.0 18581600.0 16353400.0 10774900.0 15690100.0 15998000.0 10934800.0 13118300.0 17883500.0 9208800.0 False True 16980724.50174553 17688912.044449754 17407566.330365144 11798943.256408183 16924821.605542824 15898150.5478432 12040196.297363846 13072795.679134231 14636307.206348224 9127217.196337992 1.8604492625154696 1.9380400032056728 1.907215086034041 1.2927207715777966 1.8543244059463573 1.7418398407591122 1.3191530384742673 1.4322871251907183 1.6035892311427167 1.0 23.121743632270938 -6.813836586031338 0.07057543237348982 5.697738072953611e-16 3.1081073002103596 0.6140770769271053 0.18867999363226065 20.570898330018636 0.9449970364623151 18.137092039690913 22.090782856684985 1.5351945287930118e-07 6.813836586031338 3.108107300210359 RLNS(ph)PIGR ddPTM_KYSE-520_SHP099_60min_R1 2 RLNSPIGR 8 1 C9J4M6;C9J2Y9;P30876 C9J4M6 POLR2B DNA-directed RNA polymerase;DNA-directed RNA polymerase II subunit RPB2 1 RLNS(1)PIGR;RLNS(1)PIGR 87.29799999999999 0.0041245 323810000.0 249650.0 257310.0 281340.0 243524.0 271130.0 265580.0 241100.0 237520.0 302870.0 293270.0 True False 235801.4168350634 244948.44136981593 299475.6265599159 266668.4477418396 292466.38848132396 263922.416708101 265472.740909246 236696.09855758474 247876.4427313832 290671.8559606071 0.8112289236114419 0.8426974829066775 1.0302876608752307 0.9174209414274338 1.0061737401950606 0.9079737556148838 0.9133073445721687 0.8143069021091007 0.8527707022484361 1.0 18.149031865031407 -9.69755428742515 16.07729850184166 1.000000033087321 0.9035491231877016 0.15245509540969782 0.07047713102835575 0.0 0.0 0.07287594753845232 0.017675013486353548 2.0065302552182372e-10 9.69755428742515 -0.09645090989961946 RLNS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 4 RLNSSPR 7 1 Q9UBS0 Q9UBS0 RPS6KB2 Ribosomal protein S6 kinase beta-2 1 RLNS(0.5)S(0.5)PR;RLNS(0.71)S(0.29)PR;RLNS(0.5)S(0.5)PR;RLNS(0.638)S(0.362)PR 91.318 0.006505899999999999 3748400000.0 1630820.0 1260980.0 1037860.0 1236070.0 1500170.0 1426790.0 1379720.0 1431510.0 1509050.0 1532710.0 True False 1540355.163640928 1200400.628030431 1104762.1162347146 1353545.7211620025 1618224.8442003026 1417884.874369121 1519195.5623695743 1426544.4259269463 1235044.5600547884 1519131.381830337 1.0139709982062377 0.7901888160483652 0.7272327656766814 0.8909997761557481 1.0652303438367339 0.9333523692077058 1.0000422481820894 0.9390527001082444 0.8129939087735358 1.0 20.534815215805722 -5.525606734121954 24.986961399944345 0.9582132872749689 0.8335499178024042 0.24421853079593214 0.09097119939946725 109.43282922879307 1002337.5462364968 0.02703316379987616 0.0351065151832263 2.981214781428887e-06 5.525606734121954 -0.12466336947256473 RLNVWDLSK ddPTM_KYSE-520_SHP099_60min_R1 4 RLNVWDLSK 9 1 E9PC52;Q16576;Q16576-2;Q5JP02;Q09028-4;Q09028-3;Q09028-2;Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5 E9PC52;Q09028-4 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 0 ;;; 215.06 1.6778e-08 3817690000.0 7141760.0 6814940.0 5322360.0 4580150.0 8281920.0 6874090.0 5337880.0 4871460.0 5413010.0 5052360.0 False True 6745592.336054396 6487540.052966517 5665447.841677089 5015446.078927696 8933659.986321134 6831186.254495785 5877485.003088523 4854562.042267314 4430143.834877684 5007600.021076602 1.3470709137436534 1.295538786177203 1.1313698813466844 1.0015668299820413 1.7840202789200514 1.3641637162999938 1.173712951983114 0.9694388573038656 0.8846840435001898 1.0 22.255687901831468 -7.1234287240754295 2.8834513011539094 0.9399989182023061 1.3156237786117164 0.4273278652759299 0.19083211086184826 0.2894584877913489 4.59161492507404 0.11256044224110212 0.058492428683830526 7.526122379169496e-08 7.1234287240754295 0.37562486040941034 RLPATLLNAFPTAPS(ph)PRPPR ddPTM_KYSE-520_SHP099_60min_R1 1 RLPATLLNAFPTAPSPRPPR 20 2 Q93015;Q93015-2 Q93015 NAT6 N-acetyltransferase 6 1 RLPATLLNAFPTAPS(1)PRPPR 81.157 0.0032546999999999997 58312000.0 109800.0 121700.0 109470.0 96385.0 111360.0 124710.0 89914.0 90700.0 113220.0 100890.0 True False 103709.17511912661 115853.34932457576 116526.61135819278 105545.40142079293 120123.39844827318 123931.63863117424 99003.38459607594 90385.38286953907 92662.1020439369 99996.19309123227 1.0371312338311396 1.1585775992379639 1.1653104758886057 1.0554941959090163 1.201279716105569 1.2393635677520671 0.9900715370809112 0.9038882388960077 0.9266562973992014 1.0 16.609585551307365 -6.920051405001406 6.099939056904219 0.9383575338454779 1.14269130051462 0.6958524801501724 0.061292718957188165 0.11370200580343491 6.760018911116587 0.026564170679100135 0.017755518491474147 1.2021221377426678e-07 6.920051405001406 0.20433376666914205 RLPDAHSDYAR ddPTM_KYSE-520_SHP099_60min_R1 7 RLPDAHSDYAR 11 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 0 ;;;;;; 186.58 1.9840999999999998e-06 10693520000.0 2159063.0 2429608.0 1510193.0 1402161.0 2495634.0 2082946.0 1686255.0 1984524.0 1866392.0 1763781.0 False True 2039295.4714046174 2312885.984764044 1607542.4571742325 1535421.959864925 2692026.197584925 2069945.5613844134 1856718.1116628796 1977640.1494353812 1527502.2607135444 1748155.2725408555 1.1665413841875754 1.3230437942748536 0.9195650308783788 0.8783098297860388 1.539923964346829 1.184074203188972 1.0621013709864762 1.1312725937444796 0.8737795118699021 1.0 20.73740190117411 -7.701565863616701 6.928558306976457 0.937897913632374 1.15160343997053 0.18317855013656437 0.18063275525830033 0.34501022998760233 31.593550442433525 0.13185577552451683 0.04807664184779909 1.988081281921011e-08 7.701565863616701 0.21370552633815598 RLPENLYNDR ddPTM_KYSE-520_SHP099_60min_R1 2 RLPENLYNDR 10 1 E5RHG9;B7Z2R2;P14927;P14927-2 E5RHG9 UQCRB Cytochrome b-c1 complex subunit 7 0 ; 139.76 0.00060541 2194260000.0 983350.0 1447880.0 730780.0 845650.0 1554730.0 1530800.0 1087790.0 1034790.0 1104570.0 957330.0 False True 928801.6152403734 1378321.6714878136 777887.2480893424 926020.3217460575 1677078.405796366 1521245.7093785712 1197754.4290073346 1031200.5550118025 904007.9319437521 948848.8009914687 0.9788720966605557 1.4526251917561377 0.8198221331749741 0.9759408672682546 1.7674875112282984 1.6032540777719222 1.2623238051792658 1.0867912294712108 0.9527418182951155 1.0 19.855818686616075 -7.407852938652788 3.2507183837646774 0.9847655579136338 1.276741975347341 0.1546858518153459 0.2771901894826238 0.537187120798577 10.485685730803656 0.20070600785458317 0.08191625367107337 3.909732652415704e-08 7.407852938652788 0.29197641743370717 RLPQDHADSCVVS(ph)S(ph)DDEELSR ddPTM_KYSE-520_SHP099_60min_R1 3 RLPQDHADSCVVSSDDEELSR 21 1 D6RA71;P78317 D6RA71 RNF4 E3 ubiquitin-protein ligase RNF4 2 RLPQDHADSCVVS(1)S(1)DDEELSR;RLPQDHADSCVVS(1)S(1)DDEELSR;RLPQDHADS(0.009)CVVS(0.956)S(0.959)DDEELS(0.076)R 135.66 1.2710999999999999e-05 381250000.0 496686.0 497551.0 477220.0 550387.0 542394.0 479728.0 400713.0 443385.0 580973.0 403063.0 True False 469133.83746100654 473647.90312072367 507982.36477899743 602695.6150001147 585077.3220002922 476733.83960593323 441220.9806220101 441847.0009218364 475482.9483375044 399492.17539826874 1.1743254720654026 1.1856249816370654 1.2715702485851463 1.5086543670079766 1.4645526446594523 1.1933496297659882 1.1044546246297322 1.1060216648332162 1.1902184263395839 1.0 18.6078077207073 -6.496273574325972 6.614549586617545 1.1138259135510478 1.3223324770618878 0.4804505205802351 0.10821416552260453 0.19243749278514022 31.29319596540607 0.04426334460588933 0.03754932157091363 3.1895280486000985e-07 6.496273574325972 0.20850656351084007 RLPS(ph)SPASPSPK ddPTM_KYSE-520_SHP099_60min_R1 1 RLPSSPASPSPK 12 1 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 RLPS(0.5)S(0.5)PAS(0.001)PSPK 200.19 3.8381e-08 346400000.0 710390.0 725960.0 577170.0 524410.0 554310.0 611920.0 507890.0 577920.0 761330.0 536830.0 True False 670983.2505726443 691083.7919118252 614375.301704651 574249.7687303838 597931.0434075277 608100.7802998006 559232.4777287303 575915.3304075423 623091.6635674841 532074.1038474201 1.2610710533002343 1.298848763573736 1.1546799539051273 1.0792665243017696 1.123773998929655 1.1428873833600108 1.0510424651095185 1.0823968433026658 1.1710618108679174 1.0 19.02126766341144 -4.897593128706314 3.644664269280736 1.0987035814187092 1.2803054985930207 0.7153528191812486 0.04643214023054728 0.11392018012009693 2.891660185603539 0.01202729828551999 0.027975917570021727 1.2659217782250226e-05 4.897593128706314 0.1816019171743115 RLPSS(ph)PASPSPK ddPTM_KYSE-520_SHP099_60min_R1 1 RLPSSPASPSPK 12 1 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 RLPS(0.028)S(0.969)PAS(0.003)PSPK 151.3 1.7633e-05 287750000.0 476910.0 484550.0 366380.0 338370.0 360710.0 433860.0 340070.0 341390.0 520730.0 364720.0 True False 450454.8516034848 461271.4906756216 389997.44102872664 370528.58306534996 389095.824840846 431152.1188078048 374447.59436336445 340205.7977710248 426178.5585350584 361488.86454786645 1.24610989654382 1.27603236479375 1.0788643282733408 1.0250069072771852 1.0763701541056017 1.1927120337360044 1.035848213005693 0.9411238661432586 1.1789534902218988 1.0 18.46359168092439 -4.778579188643466 7.848369430425223 1.0660532018990432 1.261459456453152 0.5388757628395657 0.07215021619016082 0.10649920838232038 34.13237048833085 0.018896256917255567 0.04183030537030956 1.665025201756926e-05 4.778579188643466 0.19540625455410887 RLPSSPAS(ph)PSPK ddPTM_KYSE-520_SHP099_60min_R1 1 RLPSSPASPSPK 12 1 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 RLPSSPAS(0.5)PS(0.499)PK 74.783 0.011387999999999999 475100000.0 370210.0 346990.0 345290.0 285850.0 309280.0 393260.0 330270.0 387400.0 506770.0 404610.0 True False 349673.7133046615 330320.07955739147 367547.94588353334 313017.09805606393 333618.57643751666 390805.5184676098 363656.9147245816 386056.19981984014 414753.3426320962 401025.4701818164 0.87194888929655 0.8236885288299305 0.9165202043573316 0.780541689569365 0.8319136844007966 0.9745154548174383 0.9068175010422838 0.9626725196402376 1.0342319215885611 1.0 18.613334343381506 -6.811096050167312 0.9873205173994521 1.0079341156761936 0.8452383170462561 0.6622981341810068 0.0458594563834022 0.349875593926109 0.6641368303985818 0.03534533161150457 0.019321386652547044 1.5449127231637441e-07 6.811096050167312 -0.16269579862993755 RLPSSPASPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 RLPSSPASPSPK 12 1 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 RLPSS(0.001)PAS(0.002)PS(0.997)PK 77.74 0.010154999999999999 588230000.0 1973700.0 1791000.0 1566700.0 1588200.0 1669000.0 1607900.0 1608100.0 1719100.0 2098100.0 1681500.0 True False 1864214.9265265968 1704957.671654191 1667691.9888086289 1739142.05049026 1800340.804689006 1597864.499679778 1770662.4415435859 1713136.843340957 1717137.9287968932 1666603.2181872053 1.118571538913946 1.0230135481849751 1.0006532872429035 1.0435249563372118 1.0802456067781205 0.9587551987435884 1.0624379109681354 1.0279212380283096 1.0303219806959545 1.0 20.668479240360934 -4.260011559768789 24.365958828139313 1.026692478751546 1.118571581861774 0.42787764439850295 0.0323469096028422 82.93530578717024 1415097.6646128732 0.007746648923949638 0.046617451964920016 5.495262467298042e-05 4.260011559768789 0.09187910311022818 RLPT(ph)PEQIFQNIK ddPTM_KYSE-520_SHP099_60min_R1 1 RLPTPEQIFQNIK 13 1 Q9H9L7-2;Q9H9L7;H0YEQ5 Q9H9L7-2 AKIRIN1 Akirin-1 1 RLPT(1)PEQIFQNIK 154.12 6.8987e-06 138210000.0 138290.0 161690.0 114810.0 93465.0 111250.0 133150.0 78841.0 112700.0 144920.0 126240.0 True False 130618.7780257197 153922.16969836218 122210.83630249485 102347.88549872297 120004.74207408744 132318.96146051516 86811.01769401018 112309.0700043778 118606.18113590665 125121.61181323389 1.0439345859825664 1.2301805217160902 0.9767364289145837 0.817987268670222 0.9591048287742306 1.057522833529547 0.6938131345653616 0.8975992906167076 0.9479272159069316 1.0 16.932971477073085 -4.9377554120019145 5.916433065877192 0.9047157692450547 1.1339838531082118 0.4268851423825425 0.10336770470562541 0.1734616822353358 11.765767843602987 0.027060749159804536 0.057365380263583295 1.1541030479818083e-05 4.9377554120019145 0.2292680838631571 RLPTEEEWEFAAR ddPTM_KYSE-520_SHP099_60min_R1 2 RLPTEEEWEFAAR 13 1 C9JL30;J3KQJ1;C9J660;F8WA42;Q8NBJ7-2;Q8NBJ7;Q8NBJ7-3;A8MXB9;H7C3B2;A0A494C1B1 C9JL30 SUMF2 Sulfatase-modifying factor 2 0 ; 167.32 1.9272999999999997e-06 1361420000.0 391770.0 377860.0 288310.0 245100.0 422040.0 408990.0 323240.0 291580.0 339240.0 315330.0 False True 370037.73712586734 359707.0384205766 306894.92391231016 268394.2303079976 455252.1469208797 406437.3417028629 355916.25371839304 290568.5770352838 277642.5675444728 312536.42152302794 1.1839827669448204 1.1509283835390465 0.9819493114331249 0.8587614493059079 1.4566371007333505 1.300447927707895 1.1387992861247016 0.9297110897325432 0.8883526796380622 1.0 18.253664798895866 -7.25095187311447 6.468683776937574 0.930915750185997 1.1528818486237675 0.28748494089760757 0.1540873979984067 0.21079027793497482 45.64536831031592 0.08528932982285403 0.045675447369082536 5.6111015270982125e-08 7.25095187311447 0.2219660984377705 RLQAEEK ddPTM_KYSE-520_SHP099_60min_R1 1 RLQAEEK 7 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4;REV__Q8IWV8-3 PLEC Plectin 0 123.72 0.048307 0.0 257550.0 292470.0 132620.0 144540.0 296870.0 335740.0 183770.0 217590.0 220530.0 343510.0 False True 243263.18808680383 278419.3021935802 141168.89739950252 158277.03814246444 320231.98004075827 333644.5221235708 202347.2650223646 216835.2310758879 180487.31110889817 340466.76864673593 0.7144990656612678 0.817757642839042 0.4146334103636928 0.46488248697978135 0.9405675077000745 0.9799620780897891 0.5943230989228132 0.6368763446069928 0.5301172617412466 1.0 18.37715446489674 -5.752967549011681 24.99787389777384 0.7628350275679332 0.6048363925644485 0.17529068192473884 0.18615192177628423 417.390488767753 1231590.102337529 0.05978754159918797 0.0759223715448762 1.766169786014423e-06 5.752967549011681 -0.15799863500348466 RLQGQLQGGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 RLQGQLQGGSR 11 1 U3KQU7;Q9UP83-3;Q9UP83;Q9UP83-2 U3KQU7 COG5 Conserved oligomeric Golgi complex subunit 5 1 RLQGQLQGGS(1)R;RLQGQLQGGS(1)R;RLQGQLQGGS(1)R 130.78 4.461e-05 460450000.0 417460.0 401560.0 375690.0 299805.0 328540.0 342338.0 326270.0 351990.0 434480.0 337711.0 True False 394302.66161412204 382268.45484615176 399907.5785252536 328298.3770603401 354394.2288631075 340201.34155816643 359252.5556883433 350769.02884508355 355589.38434949477 334719.1432751822 1.1780104889010024 1.1420573412853112 1.194755622914815 0.9808174514549248 1.0587808793826585 1.0163785023746823 1.0732955162740467 1.047950306674591 1.062351501232048 1.0 18.352591538512925 -5.252948617186641 24.94400720316604 1.0381303192600546 1.1686527773557367 0.8138688070213667 0.030056963855594084 249.7692468242297 733765.7276390512 0.007874337953099081 0.013360684563869909 5.585362730974615e-06 5.252948617186641 0.13052245809568208 RLQSIGTENTEENR ddPTM_KYSE-520_SHP099_60min_R1 8 RLQSIGTENTEENR 14 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ;;;;;;; 288.22 2.4253e-32 5915100000.0 2402745.0 2391720.0 1556608.0 1580305.0 2316480.0 2171693.0 1887685.0 2238630.0 1887297.0 2164998.0 False True 2269459.9450965924 2276818.181155089 1656949.4423408613 1730496.7120639763 2498773.7970317462 2158138.6584383845 2078510.6218302364 2230864.715030169 1544611.4396857105 2145817.802062957 1.0576200565186697 1.0610491622197327 0.7721762028201532 0.8064509066894229 1.1644855376954477 1.0057417998693003 0.9686333200479498 1.0396337997035205 0.7198241333447528 1.0 21.033096153704136 -7.7332398294413105 24.997451777635046 0.8599113161831021 0.9801969719497998 0.13112898316861343 0.1278758611812485 403.31319811259704 357517.9285204068 0.0890627146511712 0.03364807355613154 1.8482476835489085e-08 7.7332398294413105 0.1202856557666977 RLS(ph)AEGGDK ddPTM_KYSE-520_SHP099_60min_R1 4 RLSAEGGDK 9 1 H7BZ52;S4R3H3;S4R393;S4R410;A7E2V4-5;A7E2V4;A7E2V4-3;A7E2V4-4;A7E2V4-2;H0YCW2 H7BZ52 ZSWIM8 Zinc finger SWIM domain-containing protein 8 1 RLS(1)AEGGDK;RLS(1)AEGGDK;RLS(1)AEGGDK;RLS(1)AEGGDK 112.82 0.00094813 1597320000.0 2085980.0 2064250.0 1823260.0 1780690.0 1990820.0 1947410.0 1722230.0 1964550.0 2342440.0 2031140.0 True False 1970266.531101965 1965080.3314975821 1940790.2569191428 1949926.242216028 2147486.207783685 1935255.491834937 1896329.8157450461 1957735.4345794169 1917111.9441070461 2013145.6798030057 0.9787004243501959 0.976124257281705 0.96405852611176 0.9685966901346336 1.0667316475545998 0.9613092143556692 0.94197346708193 0.9724757896164719 0.9522966784473557 1.0 20.94102014492407 -9.529982235059423 22.017367277260565 0.9999999999999961 0.9764138140276393 0.047972808670415645 0.03223013301582078 0.0 0.0 0.03254122556985247 0.007892406483032471 2.951329949196912e-10 9.529982235059423 -0.023586185972356843 RLS(ph)AEK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSAEK 6 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RLS(1)AEK;RLS(1)AEK 113.74 0.005676 1645660000.0 997160.0 1054540.0 857960.0 1106680.0 1334650.0 1612600.0 1499220.0 1609520.0 1751480.0 2180460.0 True False 941845.5470108214 1003878.3155031898 913265.474384536 1211858.5344645241 1439679.3618802764 1602535.165236403 1650775.7885771852 1603936.9507847934 1433455.3832177597 2161142.8207722097 0.4358090256498113 0.4645127132988317 0.4225845074219631 0.56074893469165 0.6661657656507203 0.7415221011000988 0.7638439129105487 0.7421707327106137 0.6632858177811515 1.0 21.043362986274612 -5.753650926281081 1.3013340836626954 0.7726694777090146 0.43325706688312476 0.771142397066536 0.08182885402303013 0.2054949602247373 0.7300489635735451 0.030820250583276438 0.044232049723042635 1.7633928426336482e-06 5.753650926281081 -0.33941241082588985 RLS(ph)AGLYR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSAGLYR 8 1 H0Y4C5;B8ZZS2;Q13506-2;Q13506 H0Y4C5 NAB1 NGFI-A-binding protein 1 1 RLS(1)AGLYR;RLS(1)AGLYR 134.98 0.00047798 1617890000.0 447180.0 383770.0 320557.0 296376.0 385890.0 405920.0 409930.0 471330.0 529390.0 436820.0 True False 422374.0339687703 365333.1131494858 341220.6171293342 324543.48593130615 416257.34758624324 403386.50271162094 451369.7249312615 469695.0662392487 433266.12083589344 432950.114640818 0.975572057116045 0.8438226502205034 0.7881291760655059 0.7496094237105178 0.9614441329610842 0.9317158930568168 1.0425444171685339 1.084871097976068 1.0007298905448672 1.0 18.723841278819826 -6.296138127555979 1.6903935923043352 1.036103858279772 0.8409137811303173 0.594664122435264 0.06650030333754561 0.2534773242522355 1.4338368684231104 0.029932061373905784 0.026577664659587 5.056638098219809e-07 6.296138127555979 -0.19519007714945458 RLS(ph)APLPSSCGDPEK ddPTM_KYSE-520_SHP099_60min_R1 10 RLSAPLPSSCGDPEK 15 1 H0YKX0;Q96EP0-3;Q96EP0 H0YKX0 RNF31 E3 ubiquitin-protein ligase RNF31 1 RLS(1)APLPSSCGDPEK;RLS(1)APLPSSCGDPEK;RLS(0.999)APLPSSCGDPEK;RLS(1)APLPSSCGDPEK;RLS(1)APLPSSCGDPEK;RLS(0.999)APLPSSCGDPEK;RLS(1)APLPSSCGDPEK;RLS(1)APLPSSCGDPEK;RLS(1)APLPSSCGDPEK;RLS(1)APLPSSCGDPEK 192.09 2.7133e-11 25214910000.0 12781750.0 11812530.0 11287260.0 10681940.0 10545600.0 11536300.0 11248290.0 11892260.0 13310870.0 10793490.0 True False 12072720.847713068 11245038.327830981 12014854.839854544 11697148.365957629 11375478.723743789 11464297.672526807 12385376.9259314 11851008.525734361 10893951.54772638 10697868.075808153 1.1285165195684146 1.0511475976470661 1.1231074037101454 1.0934092926804004 1.0633407182752577 1.0716432088419408 1.1577425369396104 1.1077916124740674 1.0183292101312826 1.0 23.35081998206125 -7.821104892562385 5.11248974277798 1.0033202858910155 1.0983789436715166 0.5824459187456859 0.030697979792690136 0.146211062766043 7.292773129314109 0.029430412868449312 0.007853653354809094 1.5097154775295764e-08 7.821104892562385 0.09505865778050104 RLS(ph)AQAHPAGK ddPTM_KYSE-520_SHP099_60min_R1 4 RLSAQAHPAGK 11 1 H7C3T2;Q2TAZ0;Q2TAZ0-3 H7C3T2 ATG2A Autophagy-related protein 2 homolog A 1 RLS(1)AQAHPAGK;RLS(1)AQAHPAGK;RLS(1)AQAHPAGK;RLS(1)AQAHPAGK 110.84 0.00019672 8716400000.0 18883200.0 18042200.0 15186600.0 11579000.0 11325800.0 15196500.0 13867400.0 13002600.0 16359100.0 17061400.0 True False 17835711.253274057 17175425.63010568 16165552.535419146 12679464.678646713 12217076.025013015 15101653.006644541 15269252.124781724 12957497.015429653 13388699.819351446 16910249.269568328 1.0547278735489245 1.0156813986778164 0.9559618121366585 0.7498094484901928 0.7224657561375429 0.8930473327688591 0.9029584296111033 0.7662510947575418 0.7917505890020049 1.0 24.01139459050701 -5.039427869739953 3.891836652647651 0.8238459386914994 1.0294093334571643 0.5190021247086559 0.07968861471738779 0.16793731304942008 5.398173477855293 0.022140914434063314 0.04376175703914798 9.132130946648115e-06 5.039427869739953 0.205563394765665 RLS(ph)AQGQAISVVGSLSSMSPLEEEAPQAK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSAQGQAISVVGSLSSMSPLEEEAPQAK 29 1 Q92797;M0R3C7;A0A087WUE9;Q92797-2 Q92797 SYMPK Symplekin 1 RLS(0.999)AQGQAISVVGSLSSMSPLEEEAPQAK;RLS(1)AQGQAISVVGSLSSMSPLEEEAPQAK 244.25 2.8594999999999997e-31 1009950000.0 518610.0 543180.0 469980.0 435080.0 447680.0 639580.0 511820.0 739700.0 844330.0 624980.0 True False 489841.6694765956 517084.81747019803 500275.66279458755 476429.87238842767 482909.869049235 635588.1439798457 563559.7604818345 737134.1533472782 691020.9558272156 619443.1634270818 0.7907774246252661 0.8347574854316188 0.8076215742325775 0.7691260482278468 0.7795870510177664 1.0260636996353976 0.9097844544185923 1.189994816100752 1.1155518320746785 1.0 19.240612389403815 -6.601931419285628 1.3705378140391606 1.0993413340097966 0.795720953449277 0.7496676093089674 0.07214331356564771 0.19999620772667612 0.7656813315183075 0.03949648964210888 0.026671581284445238 2.500740229736523e-07 6.601931419285628 -0.30362038056051965 RLS(ph)AS(ph)STGSTR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSASSTGSTR 11 1 P56945-6;A0A2R8Y6M6;A0A2R8Y5C9;A0A2R8Y8C4;A0A2R8YFS8;A0A2R8Y5E4;A0A2R8Y4C2;A0A2R8YFK2;A0A2R8Y596;P56945;P56945-8;P56945-2;P56945-3;P56945-5;P56945-7;P56945-4 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 2 RLS(0.969)AS(0.549)S(0.479)T(0.003)GSTR 71.513 0.024947999999999998 250280000.0 729370.0 664920.0 668970.0 653010.0 684530.0 780450.0 626460.0 672480.0 815220.0 704800.0 True False 688910.3921369513 632976.2451347325 712092.8765898446 715071.874065384 738398.6165570788 775578.922056772 689788.6904604151 670147.3238380112 667196.5980238322 698556.0203261024 0.9861920477263252 0.906120950527696 1.019378340276021 1.0236428479015494 1.0570356493561919 1.110260164524405 0.9874493532221017 0.9593322573115478 0.9551082212595765 1.0 19.4140162908674 -4.782350109107059 24.580640237847334 1.0169407630353429 0.946156507407288 0.2502970516034255 0.046766869048061675 247.6983011229875 291170.44486402115 0.01353789016245266 0.0282330765194658 1.6506305959461587e-05 4.782350109107059 -0.0707842556280549 RLS(ph)ASSTGSTR ddPTM_KYSE-520_SHP099_60min_R1 8 RLSASSTGSTR 11 1 P56945-6;A0A2R8Y6M6;A0A2R8Y5C9;A0A2R8Y8C4;A0A2R8YFS8;A0A2R8Y5E4;A0A2R8Y4C2;A0A2R8YFK2;A0A2R8Y596;P56945;P56945-8;P56945-2;P56945-3;P56945-5;P56945-7;P56945-4 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 RLS(0.975)AS(0.022)S(0.001)T(0.002)GSTR;RLS(0.825)AS(0.138)S(0.035)T(0.002)GSTR;RLS(0.741)AS(0.018)S(0.223)T(0.018)GSTR;RLS(0.876)AS(0.01)S(0.113)T(0.001)GSTR;RLS(0.941)AS(0.012)S(0.043)T(0.004)GSTR;RLS(0.858)AS(0.026)S(0.114)T(0.002)GSTR;RLS(0.816)AS(0.087)S(0.087)T(0.01)GSTR;RLS(0.861)AS(0.04)S(0.097)T(0.001)GSTR 219.16 8.804400000000001e-10 15994190000.0 5283300.0 5020310.0 5117450.0 4780460.0 4988250.0 5135950.0 4925380.0 4741730.0 5765720.0 4733450.0 True False 4990224.81700256 4779126.77196106 5447329.015209501 5234793.481102291 5380796.89573993 5103894.630966085 5423285.47747649 4725282.045358099 4718810.589973221 4691515.315568378 1.0636701537439175 1.018674447486498 1.1611022556258148 1.1158001474984196 1.1469208845773629 1.0878989596451412 1.1559773575671377 1.0071974037210683 1.0058180081634318 1.0 22.16162254433919 -7.282002684259484 23.379056189725 1.0048807155421517 1.1069434307680508 0.5652588499617464 0.041316936868786305 289.0201984191133 328592.47096980526 0.02366661552157915 0.01139771990731663 5.2239296021623226e-08 7.282002684259484 0.10206271522589905 RLS(ph)DCESTDVK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSDCESTDVK 11 1 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 RLS(0.868)DCES(0.106)T(0.026)DVK;RLS(0.477)DCES(0.14)T(0.383)DVK 163.62 1.9591e-05 1209240000.0 769900.0 740740.0 665210.0 765380.0 861790.0 973980.0 987860.0 1248260.0 1391560.0 1234020.0 True False 727192.1122423996 705153.738526593 708090.5009736326 838121.4850801124 929607.9700856426 967901.0295404631 1087722.5293845185 1243930.0774060742 1138887.78237291 1223087.5428530308 0.5945544262073976 0.5765357865404455 0.5789368922210651 0.6852506102098557 0.7600502314962638 0.791358750398759 0.889325163795918 1.0170409180232718 0.9311580262818208 1.0 20.222096238209858 -6.263938157239333 0.7046249482768523 1.0031331977016067 0.5616547955427964 0.9600353078469351 0.032546283491401796 0.12697531866549033 0.13802280158139574 0.02440979208102815 0.024683405833724522 5.445801945711003e-07 6.263938157239333 -0.4414784021588103 RLS(ph)DCESTDVKR ddPTM_KYSE-520_SHP099_60min_R1 4 RLSDCESTDVKR 12 2 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 RLS(0.737)DCES(0.131)T(0.131)DVKR;RLS(1)DCESTDVKR;RLS(0.931)DCES(0.034)T(0.034)DVKR;RLS(0.558)DCES(0.221)T(0.221)DVKR 141.55 2.0873e-05 2154290000.0 2498334.0 2283134.0 2239330.0 2495243.0 2386011.0 2552000.0 2512400.0 3164090.0 3453500.0 2823740.0 True False 2359746.432714646 2173448.815586 2383680.794854681 2732390.144497839 2573776.4911544765 2536072.0213836683 2766377.910661092 3153114.51029416 2826431.4556503845 2798723.8604364763 0.8431508610308667 0.7765856597395925 0.8517027451514751 0.976298584909948 0.9196250217958559 0.906152999670412 0.9884426076353457 1.126625800732772 1.0099000818214294 1.0 21.416337717959966 -5.728185108203081 0.5457915190361261 1.0493061738435492 0.781000554408173 0.6824319941214476 0.05417542696344516 0.6867051030487983 0.40739366899962054 0.044519471087978595 0.09668953094418747 1.8698849743005273e-06 5.728185108203081 -0.26830561943537623 RLS(ph)DEHEPEQR ddPTM_KYSE-520_SHP099_60min_R1 5 RLSDEHEPEQR 11 1 Q9UK59-2;Q9UK59 Q9UK59-2 DBR1 Lariat debranching enzyme 1 RLS(1)DEHEPEQR;RLS(1)DEHEPEQR;RLS(1)DEHEPEQR;RLS(1)DEHEPEQR;RLS(1)DEHEPEQR 125.28 0.00012295 5842990000.0 2963610.0 2741360.0 2902630.0 2744570.0 2943920.0 2755830.0 2648400.0 2730830.0 3204070.0 2763540.0 True False 2799212.645489936 2609660.9507347485 3089738.1741722063 3005413.1076149438 3175589.755386492 2738629.842746765 2916126.11789318 2721357.388110516 2622291.6560317753 2739057.1856015883 1.0219621044075193 0.9527588414192163 1.1280298163959643 1.0972436513605883 1.1593732953366676 0.999843981769687 1.0646459421228553 0.9935379963645466 0.9573701746047455 1.0 21.38524795604019 -7.321139095425238 3.183289958507395 0.9767475119362958 1.0625628866885122 0.2710059425712469 0.05788005072407179 0.3731596969410571 7.455549079469538 0.03892211190607454 0.01703512101259535 4.7737635552385264e-08 7.321139095425238 0.08581537475221634 RLS(ph)DLR ddPTM_KYSE-520_SHP099_60min_R1 3 RLSDLR 6 1 Q15424-2;Q15424;Q15424-4;Q15424-3;K7ES42;Q3SYC2-3 Q15424-2 SAFB Scaffold attachment factor B1 1 RLS(1)DLR;RLS(1)DLR;RLS(1)DLR 80.78699999999999 0.025228999999999998 3930630000.0 6424200.0 5818600.0 5831700.0 5320200.0 5613200.0 5943400.0 5559900.0 5881800.0 6605100.0 5229200.0 True False 6067836.819674795 5539065.7221033415 6207620.7130499035 5825830.208423543 6054926.905260838 5906305.0360077135 6121948.951394918 5861397.408622442 5405780.34102109 5182873.356256041 1.1707476533939518 1.0687248831610665 1.1977180004903902 1.124054131361596 1.1682567736200182 1.1395811994669804 1.1811882194662073 1.1309165796126162 1.0430083796078071 1.0 22.305320711159155 -7.831395293406093 2.8648424159031434 1.0019405391619847 1.1486951093466933 0.698734350283874 0.033881951459328534 0.1280680662057938 1.9996836165031469 0.03017089465826427 0.008310243981599809 1.4743639611479504e-08 7.831395293406093 0.1467545701847086 RLS(ph)DPLLPS(ph)PEDETGSLVHLEDPER ddPTM_KYSE-520_SHP099_60min_R1 4 RLSDPLLPSPEDETGSLVHLEDPER 25 1 Q8WYL5-4;Q8WYL5;Q8WYL5-2;Q8WYL5-5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 2 RLS(1)DPLLPS(1)PEDETGSLVHLEDPER;RLS(1)DPLLPS(1)PEDETGSLVHLEDPER;RLS(1)DPLLPS(1)PEDETGSLVHLEDPER;RLS(1)DPLLPS(1)PEDETGSLVHLEDPER 161.62 1.9063999999999997e-10 568450000.0 172150.0 213090.0 217379.0 284139.0 189798.0 204444.0 179981.0 172957.0 220625.0 189581.0 True False 162600.49632748318 202852.8365453893 231391.59815869763 311143.48513049475 204734.02279710243 203167.98916134852 198175.23592528826 172357.05253546743 180565.06150365327 187901.45983178602 0.8653498300281813 1.0795703063030384 1.2314518384574822 1.6558864705417298 1.0895818637086978 1.0812475291210055 1.054676403806014 0.9172736214490599 0.9609561398048718 1.0 17.519616749730687 -6.57701081284692 1.830092322392439 0.9661868735017524 1.2048569092091184 0.20713756687599583 0.18817221932579645 0.5801772656229562 3.9417289926241295 0.09772083634288277 0.07088527927494084 2.64843419839503e-07 6.57701081284692 0.238670035707366 RLS(ph)DPLLPSPEDETGSLVHLEDPER ddPTM_KYSE-520_SHP099_60min_R1 11 RLSDPLLPSPEDETGSLVHLEDPER 25 1 Q8WYL5-4;Q8WYL5;Q8WYL5-2;Q8WYL5-5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 RLS(0.988)DPLLPS(0.012)PEDETGSLVHLEDPER;RLS(1)DPLLPSPEDETGSLVHLEDPER;RLS(1)DPLLPSPEDETGSLVHLEDPER;RLS(1)DPLLPSPEDETGSLVHLEDPER;RLS(1)DPLLPSPEDETGSLVHLEDPER;RLS(0.999)DPLLPS(0.001)PEDETGSLVHLEDPER;RLS(1)DPLLPSPEDETGSLVHLEDPER;RLS(1)DPLLPSPEDETGSLVHLEDPER;RLS(1)DPLLPSPEDETGSLVHLEDPER;RLS(1)DPLLPSPEDETGSLVHLEDPER;RLS(1)DPLLPSPEDETGSLVHLEDPER 195.47 1.4844e-15 4913461000.0 649161.0 844551.0 742619.0 1079788.0 677538.0 740568.0 670065.0 689520.0 796830.0 682038.0 True False 613150.74525963 803977.5022631036 790489.4089724103 1182410.726869901 730856.3859361176 735945.8404122494 737801.7094042054 687128.2160551787 652145.7584496577 675995.6739375342 0.9070335342357362 1.189323442826345 1.1693705144116882 1.7491394878056015 1.0811554187603467 1.0886842457519261 1.0914296316523209 1.0164683629597802 0.9647188341473316 1.0 19.36665448838682 -5.973035043746478 24.999996538948732 1.042312973481224 1.2645992913286284 0.22015245938661165 0.19758779544217567 351.6973508782573 326067.30470781453 0.06374483566463185 0.07227808131050487 1.0640571547026948e-06 5.973035043746478 0.22228631784740438 RLS(ph)DPLLPSPEDETGSLVHLEDPEREALLEEAAPPAEVHRPAR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSDPLLPSPEDETGSLVHLEDPEREALLEEAAPPAEVHRPAR 43 3 Q8WYL5-4;Q8WYL5;Q8WYL5-2;Q8WYL5-5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 RLS(1)DPLLPSPEDETGSLVHLEDPEREALLEEAAPPAEVHRPAR;RLS(1)DPLLPSPEDETGSLVHLEDPEREALLEEAAPPAEVHRPAR 103.57 6.1103e-05 468840000.0 57659.0 131461.0 80725.0 55402.0 105629.0 71057.0 80637.0 101106.0 174011.0 60304.0 True False 54460.540329633135 125145.41623301622 85928.66266456674 60667.38942278133 113941.40135320244 70613.50690574422 88788.57490128097 100755.28688431783 142414.98886033846 59769.753475802056 0.9111722428582817 2.093791741732408 1.437661319773641 1.0150182307066513 1.9063388206767813 1.181425433423149 1.4855101407976739 1.6857236482514333 2.382726723442076 1.0 15.86712797183662 -7.315755053656538 4.483074953839197 1.7877305081631854 1.45027012204402 0.050016799245091614 0.46416475504912597 0.5503025463862549 23.6033383483768 0.2518104848065131 0.11742597149816218 4.833313287842878e-08 7.315755053656538 -0.3374603861191654 RLS(ph)EDSSR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSEDSSR 8 1 Q9NYP9 Q9NYP9 MIS18A Protein Mis18-alpha 1 RLS(0.991)EDS(0.007)S(0.002)R;RLS(0.933)EDS(0.033)S(0.033)R 80.737 0.019232 166818800.0 358032.0 347918.0 393608.0 292987.0 351170.0 397027.0 291024.0 337649.0 407439.0 394133.0 True False 338171.25124090316 331203.4970444356 418980.60147506726 320832.3963902462 378805.0811160206 394549.00722331175 320443.5460405323 336477.7744268689 333458.3483013569 390641.2882508342 0.8656823060233214 0.8478455990339836 1.0725456168525538 0.8212966883936674 0.9697005731580184 1.0100033434509061 0.8203012730051532 0.8613471861448848 0.8536177775638513 1.0 18.575484915230195 -9.251605738355103 6.668266734149753 0.9999999988515412 0.905001805170316 0.11286802989813682 0.08174460727748573 12294822.992220122 2132241.6684551844 0.07915717921645127 0.019789294660855557 5.602659919218107e-10 9.251605738355103 -0.0949981936812252 RLS(ph)EGVEPWR ddPTM_KYSE-520_SHP099_60min_R1 3 RLSEGVEPWR 10 1 A0A3B3IS53;A0A3F2YNX6;Q92794;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 RLS(1)EGVEPWR;RLS(1)EGVEPWR;RLS(1)EGVEPWR 101.88 0.0012115000000000001 1027340000.0 1670820.0 1726710.0 1384990.0 1258640.0 1355630.0 1741160.0 1596540.0 1877320.0 2119210.0 1806370.0 True False 1578136.2839029045 1643756.2597554503 1474268.6714623526 1378260.7671760856 1462310.3685204063 1730292.7745894927 1757933.8439288556 1870808.0150897824 1734414.8849366892 1790366.9671345935 0.8814596743977269 0.9181113648372392 0.8234449688389064 0.7698202616986023 0.8167657219797638 0.9664458774944631 0.9818846505766101 1.044929921871789 0.9687482604264905 1.0 20.771823892793822 -6.375969199757271 3.977042217808354 0.9995245826030829 0.8413102269238801 0.7696333015895162 0.04137548178685476 0.1277983677886333 3.5199867548820625 0.017208146925321563 0.01500136082226015 4.207564674506462e-07 6.375969199757271 -0.15821435567920272 RLS(ph)ELGITQADDNLMSQEMFVGIVGNQFK ddPTM_KYSE-520_SHP099_60min_R1 5 RLSELGITQADDNLMSQEMFVGIVGNQFK 29 1 Q8NEM2 Q8NEM2 SHCBP1 SHC SH2 domain-binding protein 1 1 RLS(0.695)ELGIT(0.3)QADDNLMS(0.005)QEMFVGIVGNQFK;RLS(0.526)ELGIT(0.468)QADDNLMS(0.007)QEMFVGIVGNQFK;RLS(0.999)ELGIT(0.001)QADDNLMSQEMFVGIVGNQFK;RLS(1)ELGITQADDNLMSQEMFVGIVGNQFK;RLS(0.969)ELGIT(0.031)QADDNLMSQEMFVGIVGNQFK 327.44 1.3071999999999998e-65 412586000.0 370388.7 457826.0 402682.0 367734.0 377090.8 438527.0 295701.5 416603.0 533190.0 362326.0 True False 349842.50045943214 435831.3517491642 428639.52603398 402683.3287967414 406765.70060684334 435789.99032966886 325593.89338853303 415157.90142887144 436376.1366260979 359116.07352536276 0.9741766694681917 1.2136225133860052 1.1935960477238485 1.1213180319212352 1.1326858656414756 1.2135073377574424 0.9066536348324654 1.1560549138147966 1.2151395295183818 1.0 18.45409070186535 RLS(ph)ELLR ddPTM_KYSE-520_SHP099_60min_R1 4 RLSELLR 7 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 RLS(1)ELLR;RLS(1)ELLR;RLS(1)ELLR;RLS(1)ELLR 65.5 0.038625 8954610000.0 4153860.0 4025670.0 4018530.0 3503820.0 3598520.0 3933320.0 3579060.0 3306050.0 4039910.0 3917240.0 True False 3923437.1052853796 3832270.770546135 4277570.873675335 3836821.9993381007 3881703.0512219747 3908770.6908890316 3940866.3130595013 3294582.0841878685 3306364.1818435006 3882536.3011666075 1.0105345580687763 0.9870534293252148 1.1017465238869832 0.988225660165812 0.9997853851503249 1.0067570236792227 1.015023687447653 0.8485643993072072 0.8515990387134356 1.0 21.888567982994886 -7.249994268151073 24.34171283852491 0.887561291364358 1.0158056557247426 0.5264166051611245 0.049796193402270754 339.8268602591346 722753.5219327123 0.022906028063750937 0.013067078241673679 5.623487470594407e-08 7.249994268151073 0.12824436436038456 RLS(ph)ENAFDLEAMSMLNR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSENAFDLEAMSMLNR 17 1 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-2;H7C1M2;H7C2G8;J3QSZ5;H7C1S4;H7C257 P18583-10 SON Protein SON 1 RLS(1)ENAFDLEAMSMLNR 183.75 2.4125e-12 78081000.0 36212.0 39139.0 34050.0 36634.0 35694.0 49637.0 33826.0 41251.0 55229.0 45367.0 True False 34203.24817316767 37258.70369116327 36244.917481926255 40115.68434558627 38502.914728921154 49327.19707108974 37245.462189946666 41107.909909055765 45200.80580979151 44965.08367499191 0.7606623935226964 0.8286141300318612 0.8060680536903899 0.8921518891311946 0.8562847343334357 1.0970111259578037 0.8283196459536749 0.9142184679602547 1.0052423372878254 1.0 15.456517532948348 -5.5190222028079345 1.2537096062197055 0.9536292840087257 0.7898764920289965 0.4905435888662829 0.07156271036664393 0.43109311294633296 1.379430470181403 0.026582097734538804 0.04984130816689655 3.0267586845749795e-06 5.5190222028079345 -0.16375279197972925 RLS(ph)EQLAHT(ph)PTAFK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSEQLAHTPTAFK 14 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 2 RLS(1)EQLAHT(0.984)PT(0.016)AFK;RLS(1)EQLAHT(0.922)PT(0.078)AFK 88.755 0.0031105 917130000.0 776940.0 709520.0 717620.0 653040.0 720360.0 674950.0 606280.0 709750.0 832810.0 658920.0 True False 733841.5894085073 675433.594188768 763878.9334325964 715104.7252563643 777048.2337122667 670737.3866900103 667568.6991225936 707288.0429068949 681592.697431648 653082.4814320029 1.123658359047429 1.034224027427219 1.1696515450202432 1.0949684696615447 1.1898163797143144 1.027033193754173 1.022181298844255 1.0829995643981085 1.04365484729759 1.0 19.316905683725047 -6.294588464322866 24.982461612196207 1.0395492105487103 1.1186555928992448 0.4944240577365654 0.043939128851166034 608.0398685655493 458241.19889906445 0.015276474909758619 0.013473451972126061 5.074713582940451e-07 6.294588464322866 0.07910638235053447 RLS(ph)EQLAHTPT(ph)AFK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSEQLAHTPTAFK 14 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 2 RLS(0.988)EQLAHT(0.328)PT(0.683)AFK 61.361000000000004 0.038432999999999995 349440000.0 340260.0 342490.0 308220.0 304540.0 316030.0 324430.0 304710.0 321940.0 412720.0 337430.0 True False 321385.099508506 326036.2663120292 328088.35436943645 333483.39003671013 340899.7630352704 322405.1120288019 335513.0604830203 320823.2652813609 337780.4518245338 334440.63271656795 0.9609630770579056 0.9748703788284563 0.9810062602276114 0.9971377799638687 1.0193132343586266 0.9640129831414176 1.0032066311971166 0.9592831549067559 1.0099862839058682 1.0 18.351390612099337 -4.67321522272643 1.8682492278412972 0.9916005932131654 0.9617634981489122 0.2502746751705889 0.017880808639464053 0.6159426669531616 3.759927526597413 0.004889728316931858 0.024327766218196774 2.122192509305417e-05 4.67321522272643 -0.02983709506425325 RLS(ph)EQLAHTPTAFK ddPTM_KYSE-520_SHP099_60min_R1 7 RLSEQLAHTPTAFK 14 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 RLS(1)EQLAHTPTAFK;RLS(1)EQLAHTPTAFK;RLS(1)EQLAHTPTAFK;RLS(0.999)EQLAHT(0.001)PTAFK;RLS(0.996)EQLAHT(0.004)PTAFK;RLS(1)EQLAHTPTAFK;RLS(1)EQLAHTPTAFK 203.81 1.2746e-11 13211310000.0 13229810.0 11791600.0 11115200.0 11190150.0 11433710.0 11605510.0 10695400.0 11429290.0 13130180.0 11244250.0 True False 12495926.066327615 11225113.836447572 11831703.576948797 12253658.49155873 12333477.928089114 11533075.707244651 11776595.40904498 11389644.460606335 10746070.296902156 11144634.692894116 1.1212503963270406 1.0072213352677024 1.0616501933879232 1.0995119022942703 1.106674042528555 1.034854530906985 1.056705377391491 1.0219845490196675 0.9642371053897274 1.0 23.409845991855626 -7.326373366254873 1.5717957354335375 0.9820362506705703 1.0717039151667553 0.5372707861231029 0.033013181175084165 0.33364717827388785 1.4690380966224854 0.027524635481389385 0.010151688042611257 4.716573794924593e-08 7.326373366254873 0.08966766449618502 RLS(ph)EQLAHTPTAFKR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSEQLAHTPTAFKR 15 2 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 RLS(1)EQLAHTPTAFKR;RLS(1)EQLAHTPTAFKR 142.88 6.2597e-06 2688700000.0 1689560.0 1580500.0 1527800.0 1358610.0 1554500.0 1408720.0 1403950.0 1417020.0 1993800.0 1388620.0 True False 1595836.7387456417 1504570.4076211355 1626284.4325664295 1487731.8859190103 1676830.30610489 1399927.655941848 1545874.967231586 1412104.6883549544 1631776.1796078584 1376317.9071300107 1.1594971848280216 1.0931852298271447 1.1816197581543246 1.0809507586959524 1.2183451929369487 1.0171542844058972 1.1231961447447465 1.0260018278041363 1.1856099315096076 1.0 20.392382317028645 -6.27113710047144 24.998379223720068 1.0753177880270735 1.1420305639162076 0.2649870145806157 0.06305350497924683 1041.8585786499502 2685653.858581515 0.02035906709815617 0.018189875182491082 5.356275409718875e-07 6.27113710047144 0.06671277588913416 RLS(ph)ESQLSFR ddPTM_KYSE-520_SHP099_60min_R1 9 RLSESQLSFR 10 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 RLS(0.98)ES(0.02)QLSFR;RLS(0.998)ES(0.001)QLSFR;RLS(0.989)ES(0.011)QLS(0.001)FR;RLS(0.965)ES(0.033)QLS(0.001)FR;RLS(0.619)ES(0.376)QLS(0.006)FR;RLS(0.743)ES(0.251)QLS(0.006)FR;RLS(0.914)ES(0.081)QLS(0.005)FR;RLS(1)ESQLSFR;RLS(0.517)ES(0.241)QLS(0.241)FR 139.77 0.00016132 9216520000.0 4155083.0 3933048.0 4041291.0 3578703.0 4020586.0 3960278.0 4150922.0 4771376.0 5394560.0 4103629.0 True False 3924592.2630373924 3744098.470454596 4301799.084154219 3918821.8571437136 4336983.244194933 3935560.43601147 4570537.704854781 4754825.210303532 4415043.889791031 4067274.03963505 0.9649195566349249 0.9205424650438719 1.0576614809412284 0.9635008162605496 1.066312031579776 0.9676162455885567 1.1237348799995999 1.1690447124949994 1.085504405842097 1.0 21.95563076747689 -6.764300795578445 24.999998389197362 1.1086580778649457 0.9922579302930138 0.43245642276656626 0.05770862068798171 64.53009875734946 563784.2600448806 0.02288361570475056 0.01619652645513046 1.7206764089425516e-07 6.764300795578445 -0.11640014757193196 RLS(ph)ESSALK ddPTM_KYSE-520_SHP099_60min_R1 9 RLSESSALK 9 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RLS(0.921)ES(0.064)S(0.015)ALK;RLS(0.5)ES(0.491)S(0.008)ALK;RLS(0.737)ES(0.221)S(0.041)ALK;RLS(0.91)ES(0.087)S(0.003)ALK;RLS(0.991)ES(0.008)S(0.001)ALK;RLS(0.66)ES(0.17)S(0.17)ALK;RLS(0.656)ES(0.331)S(0.012)ALK;RLS(0.969)ES(0.019)S(0.012)ALK;RLS(0.994)ES(0.006)SALK 165.07 0.00012174 24353140000.0 16086630.0 14955000.0 14088370.0 17001970.0 17832860.0 18940050.0 22022780.0 23587010.0 23120350.0 20518250.0 True False 15194272.565998137 14236539.352087364 14996528.872389015 18617832.116971307 19236204.626906175 18821838.122495156 24249057.524020378 23505192.167559497 18922277.256593693 20336474.26795696 0.7471438935675737 0.7000495348654943 0.7374202959073491 0.9154896700214342 0.9458967357589403 0.925521202667449 1.1923924080698813 1.155814516216083 0.9304600692957118 1.0 24.27756624522424 -5.642249655506921 1.0198523106585595 1.0685386947961422 0.7034645444466961 0.7278104909271625 0.08222278070657756 0.28209154649515544 0.6166275252294532 0.03725789952972304 0.0664137736366575 2.279031587112635e-06 5.642249655506921 -0.365074150349446 RLS(ph)EVIYEPFQLLSK ddPTM_KYSE-520_SHP099_60min_R1 4 RLSEVIYEPFQLLSK 15 1 A0A087WVA8;Q8IWB9;Q8IWB9-2 A0A087WVA8 TEX2 Testis-expressed sequence 2 protein 1 RLS(0.999)EVIY(0.001)EPFQLLSK;RLS(1)EVIYEPFQLLSK;RLS(1)EVIYEPFQLLSK;RLS(1)EVIYEPFQLLSK 191.8 2.7640999999999997e-11 304339100.0 744172.0 823869.0 607942.0 685134.0 586371.0 644851.0 638172.0 618025.0 776907.0 504808.0 True False 702891.2956898959 784289.0965874199 647130.9140615924 750248.9293669508 632515.0617053913 640826.2457136667 702684.6537185201 615881.2155231187 635840.2730316992 500335.7938546808 1.4048391186940465 1.5675254623402206 1.2933932011459235 1.4994908191294736 1.264181114911601 1.2807923270422472 1.404426112121433 1.2309357497257079 1.2708270742196286 1.0 18.932537140378177 -12.784952649376617 0.08693733432785211 3.267484234943244e-16 1.7141397846408277 0.6797031353051479 0.08506095948268097 92.58420953265264 0.721475581710831 19.058839606919378 2.350751084322762 1.6407686545501176e-13 12.784952649376617 1.7141397846408275 RLS(ph)FAVPFR ddPTM_KYSE-520_SHP099_60min_R1 4 RLSFAVPFR 9 1 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 1 RLS(1)FAVPFR;RLS(1)FAVPFR;RLS(1)FAVPFR;RLS(1)FAVPFR 148.62 0.00019382 2518780000.0 1414640.0 1574240.0 1391220.0 1175410.0 1486550.0 1458550.0 1345890.0 1175710.0 1460100.0 1306930.0 True False 1336167.099185076 1498611.1474175847 1480900.267230704 1287120.6130000986 1603533.0276875028 1449446.6484283484 1481945.6958205935 1171631.7364227758 1194982.6461257054 1295351.6169761524 1.0315091915384356 1.1569145610949387 1.143241918119262 0.9936457376760234 1.2379133253647099 1.118960002390635 1.1440489797511684 0.9044893456479514 0.9225160415634894 1.0 20.30491233303734 -7.260134991437316 24.993853299021172 0.9351270122362529 1.1203606453524777 0.5868686595611401 0.06745289853963879 75.38040848969061 1444426.7092188855 0.03285006788931529 0.01762780952170458 5.493700870124339e-08 7.260134991437316 0.18523363311622476 RLS(ph)FLVSYIASK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSFLVSYIASK 12 1 P47897;A0A1B0GVU9;A0A0U1RQT0;C9J165;A0A0U1RQL2;A0A0U1RRI9;A0A0U1RQU2;A0A0U1RQM8;A0A0U1RQE9 P47897 QARS Glutamine--tRNA ligase 1 RLS(1)FLVSYIASK 121.04 0.00057065 10649000.0 37501.0 48054.0 52271.0 33342.0 45958.0 53543.0 29972.0 34855.0 41169.0 22712.0 True False 35420.744773609884 45745.41370947545 55640.47229655704 36510.813655362144 49574.63313474977 53208.81827623262 33001.862258531386 34734.096140218164 33693.747386034665 22510.789349668612 1.5735007877069989 2.0321550257032137 2.4717246220144715 1.6219250728273387 2.20226098537409 2.363702909290292 1.4660464253785581 1.5429976977119861 1.4967821368969756 1.0 14.458329025896655 -6.838683237814582 7.977951898804433 1.4160811246123242 2.0503873893427977 0.5398570906445522 0.3012291161835323 0.21405359897722423 19.31507246785306 0.12584692190098049 0.08482288523238779 1.449828932459167e-07 6.838683237814582 0.6343062647304736 RLS(ph)GEER ddPTM_KYSE-520_SHP099_60min_R1 2 RLSGEER 7 1 Q99549-2;Q99549;A0A0A0MT47 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 RLS(1)GEER;RLS(1)GEER 83.86200000000001 0.0065721 848103000.0 1161584.0 1314403.0 1091660.0 1082522.0 1212430.0 1168217.0 1285037.0 1306883.0 1451549.0 1348608.0 True False 1097148.6199597032 1251257.1069208737 1162030.1503177558 1185404.5654078934 1307841.3432169526 1160925.724374907 1414941.0807125445 1302349.7279017847 1187984.2921725383 1336660.3823211489 0.8208133004245052 0.9361069748682385 0.8693533269085579 0.8868405027082531 0.9784395202510968 0.8685270692013228 1.0585643888505611 0.9743310605497391 0.8887704819301742 1.0 20.35020152242878 -5.774807705104431 0.9165612384022556 0.970315340651675 0.8703903559795044 0.327666666458567 0.05721277714437333 0.7461428252950209 1.3540214084816977 0.028053653675053265 0.04445108981593353 1.679547515765119e-06 5.774807705104431 -0.09992498467217059 RLS(ph)GGSHSYGGES(ph)PRLS(ph)PCSSIGK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSGGSHSYGGESPRLSPCSSIGK 24 2 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 3 RLS(0.77)GGS(0.06)HS(0.129)Y(0.05)GGES(0.991)PRLS(0.992)PCS(0.006)S(0.001)IGK 109.11 0.001288 277050000.0 216990.0 222310.0 149820.0 193800.0 150730.0 200750.0 163350.0 181560.0 232790.0 153060.0 True False 204953.13214115932 211629.8939058868 159477.63692047552 212218.6937319053 162591.5934636153 199497.04478556843 179863.01214236935 180930.21073642254 190521.20415834736 151704.00747887825 1.3510067106809618 1.395018479886578 1.0512420836521381 1.3988997209678362 1.0717686115592757 1.3150413631185347 1.1856180672577927 1.1926528095285382 1.255874563398555 1.0 17.210899671383256 -13.999999999999192 0.10018603544265246 0.2716792861875332 1.3996409452009166 0.3217868323467341 0.11377682192867741 226.41325031480088 1.5400085967673447 34.94254218238756 1.8315250522642714 1.0000000000018611e-14 13.999999999999192 1.1279616590133834 RLS(ph)GKDTEQIR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSGKDTEQIR 11 2 Q9UMX1;Q9UMX1-2;Q9UMX1-3 Q9UMX1 SUFU Suppressor of fused homolog 1 RLS(0.827)GKDT(0.173)EQIR;RLS(0.967)GKDT(0.033)EQIR 73.415 0.01488 1134000000.0 1512270.0 1383750.0 1512630.0 1254250.0 1132160.0 1339360.0 1156010.0 1097360.0 1758750.0 1193480.0 True False 1428381.368464494 1317272.5729489059 1610136.550093571 1373453.5428959867 1221254.5508907747 1331000.5574296345 1272870.7723703736 1093553.5142857502 1439405.3344795448 1182906.6957133892 1.207518203794648 1.1135895821051913 1.3611695292015633 1.1610835815479785 1.0324183262436084 1.125194879911414 1.0760534004778193 0.9244630352068878 1.2168375914141445 1.0 20.173904851843584 -5.58360660781279 5.255528869350646 1.0636794705309434 1.223042802112378 0.4012800135204664 0.09127816672976641 0.19832738120951432 10.98521148652249 0.02636094080135056 0.03457698985361017 2.6085153228727052e-06 5.58360660781279 0.15936333158143468 RLS(ph)GLSSVGHNWR ddPTM_KYSE-520_SHP099_60min_R1 5 RLSGLSSVGHNWR 13 1 Q14D93;A0A0G2JR24;Q8WYQ4 Q14D93 C22orf15 Uncharacterized protein C22orf15 1 RLS(0.715)GLS(0.142)S(0.142)VGHNWR;RLS(0.684)GLS(0.158)S(0.158)VGHNWR;RLS(0.715)GLS(0.142)S(0.142)VGHNWR;RLS(0.94)GLS(0.03)S(0.03)VGHNWR;RLS(0.851)GLS(0.074)S(0.074)VGHNWR 58.885 0.026152999999999996 49966800000.0 7911100.0 7046630.0 6892720.0 6374390.0 7031390.0 6316890.0 6359520.0 6654480.0 7959460.0 6296280.0 True False 7472255.512613131 6708099.317592724 7337035.759941926 6980210.10906977 7584720.389863527 6277463.946378629 7002402.344534071 6631397.162047315 6514222.705658318 6240499.857631709 1.1973809283041754 1.0749298086096697 1.1757128318766368 1.1185338143279413 1.2154027021710332 1.0059232576861155 1.1220899774511823 1.0626387810805837 1.043862327421074 1.0 22.573230161431614 -6.266942506222364 24.99913099592572 1.0555169877872554 1.1508364841189613 0.5517658406868462 0.04890756048766795 390.33583522705135 1773178.6528943582 0.016212775349468734 0.014700809273337685 5.40825915075116e-07 6.266942506222364 0.09531949633170589 RLS(ph)GVSSVDSAFSSR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSGVSSVDSAFSSR 15 1 P57078-2;P57078 P57078-2 RIPK4 Receptor-interacting serine/threonine-protein kinase 4 1 RLS(0.989)GVS(0.008)S(0.003)VDSAFSSR 55.453 0.041088 0.0 59270.0 57075.0 50945.0 57172.0 51845.0 53690.0 52304.0 47867.0 64517.0 55427.0 True False 55982.17494818425 54333.03132867844 54228.99621488205 62605.60969061143 55924.90654230166 53354.90079470575 57591.39875784818 47700.96054924178 52802.339141217846 54935.959901553506 1.0190442662421042 0.9890248832648864 0.9871311307213281 1.13961073589689 1.0180018086972606 0.9712199603013936 1.048336988396185 0.8683012117149312 0.9611616732617551 1.0 15.745463195236013 -7.24266715302512 24.995585176430488 0.9360485725113206 1.0239268421751702 0.3244612652857557 0.05357033998305886 870.1985656657052 1158688.5336535154 0.025562121506863024 0.014725656140826604 5.7191679062764864e-08 7.24266715302512 0.0878782696638496 RLS(ph)IIGPTSR ddPTM_KYSE-520_SHP099_60min_R1 4 RLSIIGPTSR 10 1 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 RLS(0.994)IIGPT(0.003)S(0.003)R;RLS(1)IIGPTSR;RLS(1)IIGPTSR;RLS(1)IIGPTSR 176.58 1.6559000000000002e-05 2748080000.0 1255429.0 1208866.0 969492.0 863041.0 1032113.0 980059.0 1046310.0 1093197.0 1196930.0 1152835.0 True False 1185787.850734334 1150790.2628151407 1031987.0055620447 945064.1571572622 1113334.4211803384 973942.0882465717 1152081.2258015457 1089404.9547610977 979597.684149881 1142621.7787920572 1.037778093104361 1.0071488957892252 0.903174632863228 0.8271014737320633 0.9743682834028593 0.8523748683279885 1.0082787210825692 0.9534256872932891 0.857324534095158 1.0 20.123916502919723 -4.669520498292125 4.755723463097237 0.919511600421814 1.0296415575971378 0.31336694056105296 0.05990538534236024 0.22956300438080332 8.732451157104874 0.015130937568476483 0.042494205101563425 2.1403239031071922e-05 4.669520498292125 0.11012995717532381 RLS(ph)ITSLTGK ddPTM_KYSE-520_SHP099_60min_R1 3 RLSITSLTGK 10 1 G3V1S3;Q6ZUT9;Q6ZUT9-2 G3V1S3 DENND5B DENN domain-containing protein 5B 1 RLS(0.879)IT(0.096)S(0.024)LT(0.001)GK;RLS(0.995)IT(0.005)SLTGK;RLS(0.995)IT(0.005)SLTGK 125.22 0.00028659 796197000.0 2191540.0 1854390.0 1678230.0 1534980.0 1666640.0 1782110.0 1647350.0 1566150.0 1958940.0 1661070.0 True False 2069970.907473323 1765302.3209038645 1786411.391062942 1680864.0376914348 1797795.086115569 1770987.1904498618 1813880.2145866684 1560717.3911921573 1603245.8768587697 1646354.2120929067 1.2573059261906336 1.0722494029153948 1.0850711092068028 1.0209613613796134 1.091985596362125 1.0757024080489441 1.1017557468880264 0.9479839634316088 0.97381588061822 1.0 20.650843333427026 -1.00000000003174 0.8465294623043267 1.0325295368211684 76.20184299926477 0.6500689214672789 0.04869023513789685 463.41847512009 1.2983118782460492 0.018118966827152347 67070.50282000634 0.0999999999926916 1.00000000003174 75.1693134624436 RLS(ph)LESEGAGEGAAASPELSALEEAFR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSLESEGAGEGAAASPELSALEEAFR 27 1 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 RLS(0.981)LES(0.019)EGAGEGAAASPELSALEEAFR;RLS(0.982)LES(0.018)EGAGEGAAASPELSALEEAFR 155.11 2.6874e-07 207984000.0 40214.0 35571.0 36451.0 26738.0 30567.0 42405.0 34440.0 38650.0 57988.0 39374.0 True False 37983.24925537847 33862.115766840485 38800.6897836621 29279.171480927158 32972.448997560736 42140.334665663904 37921.53130200924 38515.9321709778 47458.84095852163 39025.17699250845 0.9733011399966233 0.867699223333206 0.9942476312435573 0.7502636435588182 0.8449019719728718 1.0798243060820316 0.9717196493250736 0.9869508645244989 1.2161082822925355 1.0 15.252117554882298 -6.262289473408206 24.998888867486034 1.0451549922515817 0.8835250712689333 0.45518516174641277 0.09003692363128332 76.81527944733044 2258901.2203175286 0.031017328011979702 0.028988898269439112 5.466514779154535e-07 6.262289473408206 -0.1616299209826484 RLS(ph)LGQGDSTEAATEER ddPTM_KYSE-520_SHP099_60min_R1 12 RLSLGQGDSTEAATEER 17 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RLS(1)LGQGDSTEAATEER;RLS(0.942)LGQGDS(0.029)T(0.029)EAATEER;RLS(1)LGQGDSTEAATEER;RLS(1)LGQGDSTEAATEER;RLS(0.997)LGQGDS(0.001)T(0.001)EAAT(0.001)EER;RLS(0.994)LGQGDS(0.003)T(0.003)EAATEER;RLS(0.999)LGQGDS(0.001)TEAATEER;RLS(0.979)LGQGDS(0.019)T(0.002)EAATEER;RLS(0.548)LGQGDS(0.413)T(0.039)EAATEER;RLS(0.991)LGQGDS(0.004)T(0.004)EAATEER;RLS(0.598)LGQGDS(0.366)T(0.036)EAATEER;RLS(0.99)LGQGDS(0.008)T(0.002)EAATEER 343.68 6.272699999999999e-59 18553420000.0 5973601.0 5538788.0 5417311.0 4700873.0 4685093.0 5313421.0 5072153.0 5426007.0 6284666.0 5502022.0 True False 5642233.4444516385 5272696.310589711 5766519.5350640705 5147642.556551001 5053783.164567307 5280257.968625561 5584895.724682933 5407185.448156555 5143529.077937299 5453278.3655883465 1.034649813597569 0.9668855974530557 1.057440891235694 0.9439537488190609 0.9267421953843468 0.9682722235390384 1.0241354558250917 0.9915476683305495 0.9431994358465821 1.0 22.37869236982149 -5.274897147591585 24.99263196744772 0.9710104062880156 1.0143814542480083 0.2870849416510215 0.034753289635517465 1124.9666710164379 2089191.8808055595 0.010208811778707923 0.015230524897807239 5.310101865835883e-06 5.274897147591585 0.04337104795999269 RLS(ph)LGQGDSTEAATEERGPR ddPTM_KYSE-520_SHP099_60min_R1 3 RLSLGQGDSTEAATEERGPR 20 2 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RLS(0.997)LGQGDS(0.002)T(0.001)EAATEERGPR;RLS(0.987)LGQGDS(0.002)T(0.002)EAAT(0.009)EERGPR;RLS(0.989)LGQGDS(0.003)T(0.003)EAAT(0.006)EERGPR 124.21 4.3521e-07 1100240000.0 441096.0 492971.0 444354.0 330682.0 366468.0 381057.0 283902.0 345748.0 498784.0 389017.0 True False 416627.5255769239 469287.9331954435 472997.76983153744 362109.9178568318 395306.94668230694 378678.6819170826 312601.58477651083 344548.68088618974 408217.3989214192 385570.61203064607 1.080547927091003 1.2171257833264102 1.2267474622623533 0.9391533134482004 1.0252517550556655 0.982125374967593 0.810750547429337 0.8936072152169217 1.0587357702691644 1.0 18.556635568812315 -5.2668774505964295 24.90874456245025 0.9516919434886291 1.1790389343833971 0.6321224238721701 0.07546655969412341 262.6335212137413 1202978.11539958 0.022155088872488404 0.03397571261466641 5.409069347638765e-06 5.2668774505964295 0.22734699089476806 RLS(ph)LMEQVSGVEAFLQASQPPDPHR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSLMEQVSGVEAFLQASQPPDPHR 25 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 RLS(0.999)LMEQVS(0.001)GVEAFLQASQPPDPHR 116.49 0.00017593 100750000.0 26111.0 20868.0 24518.0 25360.0 20180.0 22308.0 27717.0 25426.0 32409.0 22132.0 True False 24662.570779011967 19865.4699564934 26098.469510187024 27770.20677523797 21768.051191506376 22168.76749726756 30518.90485185218 25337.80314047302 26524.342564405197 21935.927698435455 1.1243003313131354 0.905613395047353 1.189759096080922 1.2659691058891773 0.992346961148078 1.0106145407676883 1.3912748652079525 1.155082360263259 1.2091735042642853 1.0 14.421008100615088 RLS(ph)LPADIR ddPTM_KYSE-520_SHP099_60min_R1 11 RLSLPADIR 9 1 Q00537;F5H6Z0;Q00537-2;F8VQZ9;F8VZY6;E5RJM2;E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RIY8;H0YBX5;E5RIU4 Q00537;E5RJM2 CDK17;CDK16 Cyclin-dependent kinase 17;Cyclin-dependent kinase 16 1 RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR;RLS(1)LPADIR 124.12 0.00044927 38389840000.0 15655520.0 15699680.0 16086900.0 15886900.0 16026590.0 14228140.0 15097430.0 15602640.0 17727860.0 16654930.0 True False 14787077.097094625 14945443.807099879 17123887.313950066 17396786.19942934 17287791.454176612 14139336.900599446 16623625.561117688 15548518.08352355 14508927.506983109 16507380.277539453 0.8957858151008047 0.9053795063675366 1.037347357730012 1.0538792895623812 1.0472765007842593 0.8565463848820365 1.0070420188802705 0.9419131214102721 0.8789358010201345 1.0 23.976607846819654 -7.505548350906951 24.02383812347469 0.929786764831485 0.9735412472792415 0.037266241410517154 0.06998575353180703 1339.0589319591604 1856258.4582616976 0.04160485050800034 0.019237537739299464 3.122134793120391e-08 7.505548350906951 0.04375448244775648 RLS(ph)LPADIRLPEGYLEK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSLPADIRLPEGYLEK 17 2 E5RJM2;E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;E5RIY8;H0YBX5;E5RIU4 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 RLS(1)LPADIRLPEGYLEK 81.57600000000001 0.004379600000000001 363120000.0 255470.0 378270.0 422300.0 253630.0 274340.0 244990.0 177620.0 179300.0 457380.0 251410.0 True False 241298.5698331806 360097.3414051539 449522.1337038899 277734.91894335963 295928.9972189228 243460.92653557347 195575.56300414877 178678.0501489345 374331.32161151676 249182.70299402042 0.9683600303467733 1.4451137140678463 1.8039861045839807 1.114583458668174 1.1875984715761918 0.9770378265036147 0.7848681335190507 0.7170563927674474 1.5022363796274394 1.0 17.926844401663775 -5.759246369559296 2.0602102914957148 0.9764211627927303 1.4023585010047541 0.2483199037201751 0.2806304136424028 0.40806539740916425 3.5633487483148785 0.09699995956981798 0.1257581784286077 1.7408190494305213e-06 5.759246369559296 0.42593733821202384 RLS(ph)LPGLLS(ph)QVSPR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSLPGLLSQVSPR 14 1 Q96Q42;Q96Q42-3 Q96Q42 ALS2 Alsin 2 RLS(1)LPGLLS(0.723)QVS(0.277)PR 90.385 0.0028381 138570000.0 92632.0 96017.0 89706.0 79680.0 76644.0 79365.0 72992.0 76677.0 88685.0 68539.0 True False 87493.518302686 91404.19919554467 95488.59229467492 87252.76324333446 82675.44675529303 78869.65359604795 80370.74369327106 76411.02538354626 72582.03956691893 67931.79778253507 1.2879611781035503 1.3455289301800908 1.4056538382857957 1.2844171079153555 1.2170360487139718 1.1610123119150684 1.1831093290149017 1.1248197144458787 1.0684545667298595 1.0 16.05179941447513 -6.620704120956841 0.47294165912870617 1.0085677812201175 1.373237714008323 0.8901997034755165 0.03959443294606968 0.34539834965764554 0.16828274699696624 0.042758214553106334 0.045183026574217855 2.394946846093903e-07 6.620704120956841 0.3646699327882055 RLS(ph)LPGLLSQVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 RLSLPGLLSQVSPR 14 1 Q96Q42;Q96Q42-3 Q96Q42 ALS2 Alsin 2 RLS(1)LPGLLS(0.037)QVS(0.963)PR;RLS(1)LPGLLS(0.024)QVS(0.976)PR;RLS(1)LPGLLS(0.121)QVS(0.879)PR;RLS(1)LPGLLS(0.245)QVS(0.755)PR;RLS(1)LPGLLS(0.004)QVS(0.996)PR;RLS(1)LPGLLS(0.01)QVS(0.99)PR;RLS(1)LPGLLS(0.445)QVS(0.555)PR;RLS(1)LPGLLS(0.001)QVS(0.999)PR;RLS(1)LPGLLS(0.003)QVS(0.997)PR 143.91 3.2585000000000002e-06 1081007000.0 1309201.0 1253708.0 1200143.0 1099499.0 1178957.0 1180169.0 995445.0 1079600.0 1387860.0 1132446.0 True False 1236577.0107025106 1193477.9858259256 1277506.1380766942 1203995.0543835717 1271734.2085522697 1172803.127509538 1096074.2952069838 1075855.1195805345 1135859.6091035008 1122413.409469657 1.1017126134360744 1.0633140835245782 1.1381779006723725 1.0726841324467624 1.1330354732247605 1.0448940805720508 0.9765335000094852 0.958519481773546 1.0119797211262802 1.0 20.098172719370936 -6.554443524487854 3.634998658239504 0.9838731291555827 1.0998260140754863 0.8172544493286353 0.02556854509260198 0.0893271730652017 2.520131205254243 0.009719121199284728 0.007609038857876595 2.7896934035699655e-07 6.554443524487854 0.11595288491990363 RLS(ph)LPGLLSQVSPR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSLPGLLSQVSPR 14 1 Q96Q42;Q96Q42-3 Q96Q42 ALS2 Alsin 1 RLS(1)LPGLLSQVSPR;RLS(1)LPGLLSQVSPR 100.67 0.00082585 216045000.0 67738.0 71337.0 68324.0 59008.0 63897.0 78534.0 54179.0 59737.0 72243.0 53645.0 True False 63980.43810764473 67909.86344097991 72728.27436226512 64616.102578597915 68925.33037580203 78043.84017529179 59655.94205608469 59529.786289720614 59125.49229782848 53169.74703517849 1.2033241020558856 1.2772275067633665 1.367850674823527 1.2152794809395318 1.2963260917942536 1.4678241768510945 1.1219903306407453 1.11961763237907 1.112013797220241 1.0 15.69831798210032 -6.918642437447217 9.850412689549186 1.0936242844681512 1.3017303519801249 0.6546472952047588 0.07715844205178564 0.22521723190005521 25.33332033845442 0.0324772659002174 0.021885420716522525 1.2060284769284408e-07 6.918642437447217 0.2081060675119737 RLS(ph)LPMDIR ddPTM_KYSE-520_SHP099_60min_R1 7 RLSLPMDIR 9 1 Q07002;D6R9B0;A0A0A0MSJ6;Q07002-3;D6RA44;D6RGH0 Q07002 CDK18 Cyclin-dependent kinase 18 1 RLS(1)LPMDIR;RLS(1)LPMDIR;RLS(1)LPMDIR;RLS(1)LPMDIR;RLS(1)LPMDIR;RLS(1)LPMDIR;RLS(1)LPMDIR 107.99 0.0007864 1596250000.0 1857360.0 1785330.0 1694150.0 1716708.0 1776210.0 1657500.0 1657270.0 1775660.0 2186410.0 1865530.0 True False 1754328.5382446337 1699560.0669650373 1803357.6197358423 1879863.4121729191 1915987.6217475496 1647154.9276815944 1824803.0249965386 1769500.6499021605 1789413.0589108318 1849002.8555603798 0.9487970951310115 0.9191765506765263 0.9753135936554821 1.01669037801631 1.0362275082408505 0.8908341719041796 0.9869119560897017 0.9570026593419595 0.9677719282745575 1.0 20.818316022135303 -1.000008532781026 0.004108027873738957 1.890413799703645 6.376111816995768e-06 0.05604427010786639 0.040357018663955885 308321.2189361662 98.025626825813 21218.51352601373 23967.802118451073 0.09999803527386178 1.000008532781026 -1.890407423591828 RLS(ph)LPSSK ddPTM_KYSE-520_SHP099_60min_R1 3 RLSLPSSK 8 1 Q8NCD3;C9JWC4;Q8NCD3-3;Q8NCD3-2 Q8NCD3 HJURP Holliday junction recognition protein 1 RLS(1)LPSSK;RLS(0.996)LPS(0.002)S(0.002)K;RLS(0.784)LPS(0.159)S(0.057)K 90.05 0.006901300000000001 1383640000.0 2781780.0 2513190.0 2396650.0 2249140.0 2148340.0 2539280.0 2663460.0 2585760.0 2903390.0 2487930.0 True False 2627469.1180590503 2392452.5800249022 2551141.8937755846 2462897.589371404 2317402.1356174834 2523431.4116219115 2932708.5296646166 2576790.6020809202 2376207.5645057983 2465888.875780253 1.0655261653782635 0.9702191382277459 1.0345729358823421 0.998786933815944 0.9397836854607708 1.0233354132081278 1.1893109046678565 1.0449743406484915 0.9636312438263959 1.0 21.23367635609938 -6.530863322979805 24.99854246635499 1.0608121363794607 0.9996682212967628 0.10173422294534795 0.06317816214986977 354.06652883097956 1108517.5332837533 0.024430176636957214 0.018956308671723363 2.9453484199398243e-07 6.530863322979805 -0.0611439150826979 RLS(ph)LQPR ddPTM_KYSE-520_SHP099_60min_R1 4 RLSLQPR 7 1 A0A1B0GUN5;Q5VTI5;Q9Y2H5 A0A1B0GUN5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 RLS(1)LQPR;RLS(1)LQPR;RLS(1)LQPR;RLS(1)LQPR 129.63 0.0013536 1868720000.0 1112330.0 891310.0 829200.0 701790.0 737020.0 773580.0 757370.0 763740.0 906770.0 927890.0 True False 1050626.8375251184 848490.1297164154 882651.5587669096 768487.9105991421 795019.2809298327 768751.8002750683 833932.3508188938 761090.7641982553 742123.425811524 919669.6164874971 1.1423959416402028 0.922603198480191 0.9597485259304631 0.8356130253973544 0.8644618313762038 0.8358999650452401 0.9067738412452283 0.8275697604375541 0.8069456819133843 1.0 19.810756152715435 -1.0000004793714747 0.848714761819072 0.8623391432412161 98.73152666998091 0.6576400948445831 0.057109330407818695 368.3662694757866 1.0224649619094248 0.018414676976343913 69603.99914364998 0.09999988962069975 1.0000004793714747 97.8691875267397 RLS(ph)LSQS(ph)ITDDDLEAIANDS(ph)EEEIIKPR ddPTM_KYSE-520_SHP099_60min_R1 7 RLSLSQSITDDDLEAIANDSEEEIIKPR 28 2 P01583 P01583 IL1A Interleukin-1 alpha 3 RLS(0.923)LS(0.105)QS(0.795)IT(0.178)DDDLEAIANDS(1)EEEIIKPR;RLS(0.706)LS(0.292)QS(0.501)IT(0.501)DDDLEAIANDS(1)EEEIIKPR;RLS(0.947)LS(0.19)QS(0.858)IT(0.004)DDDLEAIANDS(1)EEEIIKPR;RLS(0.983)LS(0.038)QS(0.979)ITDDDLEAIANDS(1)EEEIIKPR;RLS(0.805)LS(0.233)QS(0.481)IT(0.481)DDDLEAIANDS(1)EEEIIKPR;RLS(0.967)LS(0.111)QS(0.898)IT(0.024)DDDLEAIANDS(1)EEEIIKPR;RLS(0.987)LS(0.049)QS(0.795)IT(0.169)DDDLEAIANDS(1)EEEIIKPR 281.6 2.1138e-51 895008000.0 654077.0 612380.0 594779.0 618338.0 608903.0 713818.0 638615.0 725238.0 865539.0 746172.0 True False 617794.044939826 582960.3455988808 633119.4060200481 677104.6576099007 656820.2019158483 709362.7970846578 703172.4364817826 722722.3186498213 708378.936062596 739561.496593032 0.8353518237304712 0.7882513466215154 0.8560740505511238 0.9155488228215587 0.8881211433283758 0.9591667499626579 0.950796437782545 0.9772308617731122 0.9578364197242745 1.0 19.496310590849735 -5.4650045064702875 0.5673249719665914 0.9830562353493612 0.780481314173952 0.8835494974022293 0.022304721920017204 0.3942014620153994 0.2280938739287991 0.015155544138342286 0.04521177215183055 3.4276422982423585e-06 5.4650045064702875 -0.2025749211754092 RLS(ph)LSQS(ph)ITDDDLEAIANDSEEEIIKPR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSLSQSITDDDLEAIANDSEEEIIKPR 28 2 P01583 P01583 IL1A Interleukin-1 alpha 2 RLS(0.999)LS(0.002)QS(1)ITDDDLEAIANDSEEEIIKPR;RLS(0.907)LS(0.232)QS(0.854)IT(0.008)DDDLEAIANDSEEEIIKPR 249.14 1.6803e-31 60692000.0 31908.0 29646.9 28261.7 34152.0 31355.0 30831.0 30143.0 30231.7 47895.0 39275.0 True False 30137.999632978965 28222.618423095853 30083.4944023188 37397.795811826785 33822.46011445402 30638.572292821216 33190.14860733055 30126.833288831807 39198.4753346967 38927.05405548763 0.7742173242809354 0.7250129532758016 0.7728171353382408 0.9607147707226702 0.8688677048677409 0.7870765727390571 0.8526242073191682 0.7739304712318646 1.0069725615203806 1.0 15.248485547241184 -8.221031360030228 0.031260275052142725 1.8091176325826415 3.0075251674403087e-11 0.4413727713148332 0.07352799340932126 190.12105738163436 3.2045034126382173 97.38182023729196 86.92375759636151 6.011303288131051e-09 8.221031360030228 -1.8091176325525662 RLS(ph)LSQSIT(ph)DDDLEAIANDS(ph)EEEIIKPR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSLSQSITDDDLEAIANDSEEEIIKPR 28 2 P01583 P01583 IL1A Interleukin-1 alpha 3 RLS(0.93)LS(0.135)QS(0.392)IT(0.544)DDDLEAIANDS(1)EEEIIKPR;RLS(0.681)LS(0.364)QS(0.404)IT(0.551)DDDLEAIANDS(1)EEEIIKPR 147.03 3.1024e-06 362330000.0 340230.0 327430.0 343620.0 309600.0 299540.0 350670.0 350660.0 384820.0 453620.0 368850.0 True False 321356.7636683098 311699.77131755033 365770.2950114394 339024.29091536585 323112.0938505361 348481.3384555684 386108.1349118045 383485.14923766314 371254.04282963014 365582.2759609581 0.8790271979778054 0.85261182451536 1.000514300235117 0.9273542871415669 0.883828662101339 0.953222739093577 1.0561456621410128 1.0489708458366755 1.015514337651527 1.0 18.47983660226423 -6.602032171086383 4.27114064077056 1.0336364998361267 0.9120428617620064 0.6734873277173178 0.03977627222689335 0.1363284910616693 4.736383159191361 0.016586246143868603 0.012699084295393636 2.5001601513133315e-07 6.602032171086383 -0.12159363807412027 RLS(ph)LSQSITDDDLEAIANDS(ph)EEEIIKPR ddPTM_KYSE-520_SHP099_60min_R1 18 RLSLSQSITDDDLEAIANDSEEEIIKPR 28 2 P01583 P01583 IL1A Interleukin-1 alpha 2 RLS(0.746)LS(0.221)QS(0.029)IT(0.004)DDDLEAIANDS(1)EEEIIKPR;RLS(0.766)LS(0.182)QS(0.048)IT(0.004)DDDLEAIANDS(1)EEEIIKPR;RLS(0.789)LS(0.196)QS(0.014)IT(0.001)DDDLEAIANDS(1)EEEIIKPR;RLS(0.615)LS(0.187)QS(0.187)IT(0.012)DDDLEAIANDS(1)EEEIIKPR;RLS(0.978)LS(0.019)QS(0.001)IT(0.001)DDDLEAIANDS(1)EEEIIKPR;RLS(0.773)LS(0.095)QS(0.12)IT(0.012)DDDLEAIANDS(1)EEEIIKPR;RLS(0.742)LS(0.078)QS(0.131)IT(0.049)DDDLEAIANDS(1)EEEIIKPR;RLS(0.792)LS(0.132)QS(0.054)IT(0.022)DDDLEAIANDS(1)EEEIIKPR;RLS(1)LSQSITDDDLEAIANDS(1)EEEIIKPR;RLS(0.997)LS(0.003)QSITDDDLEAIANDS(1)EEEIIKPR;RLS(0.672)LS(0.051)QS(0.095)IT(0.182)DDDLEAIANDS(1)EEEIIKPR;RLS(0.888)LS(0.074)QS(0.027)IT(0.01)DDDLEAIANDS(1)EEEIIKPR;RLS(0.869)LS(0.097)QS(0.011)IT(0.024)DDDLEAIANDS(1)EEEIIKPR;RLS(0.994)LS(0.006)QSITDDDLEAIANDS(1)EEEIIKPR;RLS(0.591)LS(0.116)QS(0.135)IT(0.158)DDDLEAIANDS(0.999)EEEIIKPR;RLS(0.998)LS(0.002)QSITDDDLEAIANDS(1)EEEIIKPR;RLS(0.888)LS(0.067)QS(0.035)IT(0.01)DDDLEAIANDS(1)EEEIIKPR;RLS(0.943)LS(0.013)QS(0.005)IT(0.039)DDDLEAIANDS(1)EEEIIKPR 331.39 1.1995999999999998e-78 15113930000.0 3634070.3 3989713.0 3570173.7 3728376.2 3649623.1 3957967.0 3601297.6 4108117.6 5073978.0 4064809.7 True False 3432481.1761194644 3798041.1987986946 3800312.8091818905 4082719.953070822 3936827.6744551104 3933263.85981969 3965351.9066855554 4093867.498887454 4152671.499776462 4028798.648432094 0.8519862806882391 0.9427230125478709 0.9432868556637536 1.0133839661259103 0.9771716131773485 0.9762870282312114 0.9842516970235704 1.0161509313652801 1.0307468459344764 1.0 21.941918273503312 -2.6996183974663737 0.5919134502396535 1.0033936217511192 1.5559118152506686e-15 0.8525180178292964 0.018873094001088518 7.536847793707492 0.4644344507830568 0.009193459029959487 7.75292977798584 0.001997016267168769 2.6996183974663737 -1.0033936217511177 RLS(ph)LSQSITDDDLEAIANDSEEEIIKPR ddPTM_KYSE-520_SHP099_60min_R1 4 RLSLSQSITDDDLEAIANDSEEEIIKPR 28 2 P01583 P01583 IL1A Interleukin-1 alpha 1 RLS(1)LSQSITDDDLEAIANDSEEEIIKPR;RLS(0.75)LS(0.25)QSITDDDLEAIANDSEEEIIKPR;RLS(0.953)LS(0.045)QS(0.001)ITDDDLEAIANDSEEEIIKPR;RLS(0.998)LS(0.002)QSITDDDLEAIANDSEEEIIKPR 390.89 3.697399999999999e-109 1248570000.0 378166.0 367772.0 374533.0 346821.0 366908.0 465960.0 389248.0 467341.0 597363.0 436753.0 True False 357188.37812476855 350103.6810829735 398675.9964539883 379782.76356446435 395781.57217904995 463051.77080091427 428596.9865343928 465719.90314920945 488896.9374957816 432883.70820869214 0.8251370318435938 0.8087707493814699 0.9209771328741889 0.8773320787147112 0.9142907544772848 1.0696909170295643 0.9900972903507085 1.075854540879804 1.1293955587260993 1.0 18.72361997947122 -6.005134647288391 0.8829419527178627 1.072116617252859 0.8299815551779596 0.7921536148826018 0.0474107446409594 0.25465194463023555 0.43564020538536774 0.026438390242548574 0.0323764110972509 9.88246654286584e-07 6.005134647288391 -0.24213506207489932 RLS(ph)LSVPDLLEAEALAPEGR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSLSVPDLLEAEALAPEGR 20 1 F5H415;Q6DN12-6;Q6DN12-2;Q6DN12 F5H415 MCTP2 Multiple C2 and transmembrane domain-containing protein 2 1 RLS(0.5)LS(0.5)VPDLLEAEALAPEGR 92.492 0.00096046 17592000.0 13496.0 17554.0 13217.0 11511.0 12419.0 12659.0 14070.0 15428.0 19974.0 13278.0 True False 12747.34997639101 16710.679490908813 14068.988967947707 12605.001979091654 13396.304645555876 12579.990485382372 15492.332909967185 15374.483868922269 16347.225103564719 13160.367250127676 0.9686165844853106 1.2697730369755975 1.069042276750386 0.9578001692140746 1.017927873207787 0.9558996528201237 1.177196093051042 1.1682412486454823 1.2421556931404119 1.0 13.68391212869443 -6.788714870981924 24.98321531728462 1.1609184316668584 1.0468964335732764 0.19927834255597776 0.10303530166927737 358.430483861275 328303.95966609835 0.044183743671580754 0.02979702770013684 1.6266163339076655e-07 6.788714870981924 -0.11402199809358193 RLS(ph)LTMGGVQAR ddPTM_KYSE-520_SHP099_60min_R1 4 RLSLTMGGVQAR 12 1 O75815;O75815-3 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 RLS(0.776)LT(0.224)MGGVQAR;RLS(1)LTMGGVQAR;RLS(1)LTMGGVQAR;RLS(1)LTMGGVQAR 183.75 7.507000000000001e-08 2637590000.0 939900.0 1054820.0 983870.0 1032220.0 1100680.0 1130770.0 995340.0 1077900.0 1235500.0 1156240.0 True False 887761.8733558021 1004144.8638829001 1047291.8344476582 1130321.8784517408 1187297.2539874734 1123712.444992166 1095958.680782283 1074161.016483752 1011164.3444204573 1145996.6131411074 0.774663609975688 0.8762197482683651 0.913869921113549 0.986322180615872 1.0360390601270308 0.9805547696272314 0.956336753717209 0.9373160480287474 0.8823449675378333 1.0 20.128171349708914 -4.479119607120997 1.5023287532807588 0.9673996765169814 0.746231750049994 0.6989924599363757 0.03955610915663288 0.4545060631597343 1.3107374766463515 0.012608877662857166 0.13287962261207772 3.318030645547275e-05 4.479119607120997 -0.22116792646698746 RLS(ph)LTSGLIGILTPSSSSSSQLAPNGAK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSLTSGLIGILTPSSSSSSQLAPNGAK 28 1 F5H3X8;E9PFI7;Q8N3A8-2;Q8N3A8 F5H3X8 PARP8 Poly [ADP-ribose] polymerase 8 1 RLS(0.333)LT(0.333)S(0.333)GLIGILTPSSSSSSQLAPNGAK 88.50399999999999 0.0014062999999999999 38760000.0 27885.0 39434.0 34548.0 25002.0 27897.0 33058.0 26148.0 26571.0 37059.0 22433.0 True False 26338.163462630626 37539.53144835926 36775.019358754456 27378.182562874616 30092.33518778263 32851.672759757515 28791.295019887846 26478.831402718035 30330.019781366012 22234.261072609912 1.1845756140318175 1.6883642467706608 1.6539798304364208 1.2313511329864446 1.3534218694972946 1.4775248276735875 1.2949067623999189 1.190902243894984 1.3641118849112173 1.0 14.440496838900646 -8.28081389609393 0.2718629624338792 0.9141563773023087 1.5220616116783545 0.3821365567795312 0.16018452479159512 3.2245697932967037 0.623784950557426 0.6492868862832961 0.29780346138361635 5.238248579677533e-09 8.28081389609393 0.6079052343760458 RLS(ph)MEIEK ddPTM_KYSE-520_SHP099_60min_R1 8 RLSMEIEK 8 1 A0A5K1VW66;P35240-4;P35240-6;P35240-5;P35240-8;P35240-3;P35240;P35240-2 A0A5K1VW66 NF2 Merlin 1 RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK;RLS(1)MEIEK 150.51 0.00026689 6358400000.0 6612920.0 6731510.0 5979350.0 6838950.0 6969020.0 6729460.0 6851600.0 7336240.0 8395650.0 7282090.0 True False 6246088.145070804 6408118.155397503 6364788.468298262 7488921.751794715 7517442.225700284 6687458.943973558 7544226.593172074 7310792.295731282 6871211.597113406 7217576.347980296 0.8653996638107826 0.8878490294308691 0.881845672485242 1.0375950860416392 1.041546616656698 0.9265518813451719 1.0452576085714957 1.0129151315146212 0.9520109335644488 1.0 22.783083032785775 -5.2504497039097116 24.406175265321483 1.0030792915332372 0.8793131917106137 0.7079973420290886 0.03646038227682559 285.10450380193987 633165.9731853484 0.00992735904732898 0.016968517076394535 5.6175933251421e-06 5.2504497039097116 -0.12376609982262343 RLS(ph)MSEVK ddPTM_KYSE-520_SHP099_60min_R1 4 RLSMSEVK 8 1 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 RLS(0.894)MS(0.106)EVK;RLS(0.938)MS(0.062)EVK;RLS(0.994)MS(0.006)EVK;RLS(0.776)MS(0.224)EVK 141.89 0.00062262 1840320000.0 2664050.0 2332570.0 2049260.0 2296600.0 2320700.0 2440390.0 2517130.0 2693480.0 2649240.0 2599600.0 True False 2516269.8358479887 2220509.8359410474 2181358.5785319307 2514868.1735020345 2503325.887023234 2425158.620793292 2771586.065221444 2684136.946542955 2168204.797905665 2576569.566458195 0.9765968940271637 0.8618086097296436 0.8466134999531453 0.9760528907275046 0.9715731799410937 0.9412354521158783 1.0756884274742569 1.041748292568954 0.8415083474288347 1.0 21.297020114591888 -5.341881142179316 7.5468262492646865 0.9825777838521763 0.8918761993724218 0.2451479573524411 0.06660692436722966 0.37500203118292336 31.19330834186116 0.019026545141589354 0.02830908902019324 4.551125984353765e-06 5.341881142179316 -0.09070158447975452 RLS(ph)MSEVKDDNSATK ddPTM_KYSE-520_SHP099_60min_R1 6 RLSMSEVKDDNSATK 15 2 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 RLS(0.927)MS(0.073)EVKDDNSATK;RLS(0.999)MS(0.001)EVKDDNSATK;RLS(0.992)MS(0.008)EVKDDNSATK;RLS(0.999)MS(0.001)EVKDDNSATK;RLS(0.995)MS(0.005)EVKDDNSATK;RLS(0.965)MS(0.035)EVKDDNSATK 303.86 3.4297e-34 12194570000.0 8014460.0 7418560.0 7159850.0 6751110.0 7152810.0 6922510.0 7060340.0 6965840.0 9472990.0 7719410.0 True False 7569881.927370074 7062161.2421144275 7621385.387165049 7392733.464604771 7715695.453078225 6879304.047315294 7774068.069478155 6941677.1268792795 7752933.810644715 7651022.03301011 0.9893948670792008 0.9230350156678336 0.9961264461509594 0.9662412985754111 1.0084529125375779 0.8991353073660928 1.0160823006308395 0.9072875619661814 1.0133200214552918 1.0 22.86722104699474 RLS(ph)MYGVDLHHAK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSMYGVDLHHAK 13 1 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3 O43491 EPB41L2 Band 4.1-like protein 2 1 RLS(1)MYGVDLHHAK;RLS(1)MYGVDLHHAK 145.71 5.340800000000001e-06 2235200000.0 2410900.0 2330800.0 2190860.0 2582300.0 2777500.0 2344920.0 2408610.0 2500000.0 2991800.0 2118770.0 True False 2277162.570990001 2218824.8693978754 2332086.3410999426 2827721.015603193 2996073.448186769 2330284.4844760937 2652095.804568308 2491328.0835043853 2448564.537140527 2099999.3461781177 1.0843634666526494 1.0565836001025493 1.1105176510384207 1.3465342361889248 1.4267020861884823 1.1096596238075418 1.2629031572771559 1.1863470757924113 1.1659834759457324 1.0 21.001957448041413 -5.048614873371452 10.362469363319972 1.2284203788158656 1.073683325182282 0.2172385348760829 0.11261040635229799 0.9051944906688786 191.10805086050541 0.03065918575742026 0.05341172965214775 8.940980066223352e-06 5.048614873371452 -0.1547370536335837 RLS(ph)NLPTVDPIAVCHELYNTIR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSNLPTVDPIAVCHELYNTIR 22 1 Q86U86-8;Q86U86;E7EVG2;Q86U86-6;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;C9JCJ2;C9J053;C9JQF1;C9JPI5 Q86U86-8 PBRM1 Protein polybromo-1 1 RLS(0.955)NLPT(0.045)VDPIAVCHELYNTIR;RLS(0.999)NLPT(0.001)VDPIAVCHELYNTIR 149.57 3.635e-07 811378000.0 324169.0 396691.0 395390.0 399670.0 410610.0 436280.0 378610.0 528160.0 611300.0 417008.0 True False 306186.69935511966 377633.3689146701 420877.4720463677 437654.51663483283 442922.67094868305 433557.0146901507 416883.5936775179 526327.9362334704 500303.3296189605 413313.6335473143 0.7408095801903151 0.9136726646870705 1.0183004814869905 1.058892040116388 1.0716381822376522 1.0489782564613102 1.008637411980737 1.2734347321577495 1.2104689732226992 1.0 18.656877427616227 -3.444085731703771 0.5562677993228013 1.1270505812977007 9.800393073353984e-16 0.6750080636405024 0.07924194196521284 5.528129908874579 0.6631261048789727 0.043207636518703234 4.910187890745128 0.0003596783260115996 3.444085731703771 -1.1270505812976999 RLS(ph)NVS(ph)LTGVSTIR ddPTM_KYSE-520_SHP099_60min_R1 3 RLSNVSLTGVSTIR 14 1 F8WBA3;Q15139;A0A494C0Q1 F8WBA3 PRKD1 Serine/threonine-protein kinase;Serine/threonine-protein kinase D1 2 RLS(0.999)NVS(0.957)LT(0.043)GVS(0.001)TIR;RLS(0.994)NVS(0.952)LT(0.053)GVS(0.001)TIR;RLS(1)NVS(0.957)LT(0.04)GVS(0.001)T(0.001)IR 93.495 0.0024089000000000003 1146620000.0 1388070.0 1221440.0 1165780.0 1145730.0 1234820.0 1219590.0 1254610.0 1353390.0 1575870.0 1423790.0 True False 1311070.9900510577 1162760.188981182 1240928.0441139494 1254619.8347237147 1331993.3088352766 1211978.0864260588 1381438.2226136415 1348695.4059736007 1289731.7324499113 1411176.3282918588 0.9290624876325891 0.8239652024128202 0.8793571853745702 0.889059580699142 0.943888642496981 0.858842415457098 0.9789267258229782 0.9557242273232521 0.9139408779702615 1.0 20.428466835117977 -6.967699675466378 0.33341581350974925 0.9988040522113455 0.8582135158722717 0.4334194920690434 0.03935485825347574 1.3321795865140669 0.4210315662445047 0.054086731389447924 0.06627574286864861 1.0772098713064048e-07 6.967699675466378 -0.1405905363390738 RLS(ph)NVSLPGPGLSVPR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSNVSLPGPGLSVPR 16 1 O94806;O94806-2;C9JKP8 O94806 PRKD3 Serine/threonine-protein kinase D3 1 RLS(0.956)NVS(0.01)LPGPGLS(0.035)VPR;RLS(1)NVSLPGPGLSVPR 174.63 1.6331e-08 1845090000.0 912990.0 737770.0 787850.0 868970.0 957490.0 895180.0 875360.0 847760.0 962420.0 854380.0 True False 862344.6246995575 702326.4217846524 838636.0716045692 951556.6475346439 1032839.0156271278 889592.8495698395 963849.9314903257 844819.3184286717 787668.7886338622 846810.8578975812 1.0183438446225677 0.8293781488918938 0.9903463846539381 1.1236944338398307 1.21968088386515 1.0505213074127029 1.13821158822092 0.9976481885531628 0.9301590565211293 1.0 19.691680242287944 -5.011121289565889 7.738941298858282 1.0732506198091993 0.9200818371580974 0.2942413321033336 0.0884137859381884 0.15887950182722305 66.5015548086712 0.02459912129735472 0.04657896041523903 9.747173810732939e-06 5.011121289565889 -0.1531687826511019 RLS(ph)NVSLTGVSTIR ddPTM_KYSE-520_SHP099_60min_R1 3 RLSNVSLTGVSTIR 14 1 F8WBA3;Q15139;A0A494C0Q1 F8WBA3 PRKD1 Serine/threonine-protein kinase;Serine/threonine-protein kinase D1 1 RLS(0.991)NVS(0.009)LTGVSTIR;RLS(0.989)NVS(0.01)LT(0.001)GVST(0.001)IR;RLS(0.989)NVS(0.003)LT(0.008)GVSTIR 132.25 2.1584000000000002e-05 1964260000.0 1276288.0 1251235.0 1287204.0 1163024.0 1209778.0 1274179.0 1156732.0 1276252.0 1537743.0 1217516.0 True False 1205489.7604229478 1191123.7924579747 1370179.2294392188 1273557.4512840835 1304980.645904766 1266226.3762282974 1273665.7591764159 1271824.979691456 1258527.6345464566 1206729.7554531146 0.9989724335340507 0.9870675576494092 1.1354482834681825 1.0553791729498505 1.0814191329978096 1.049304014015004 1.0554689261790577 1.0539434980733517 1.0429241749109703 1.0 20.202671193121493 -4.669574952220805 24.999872212538108 1.0613457964005963 0.9930159533389524 0.40303680240490924 0.032152379686977296 16.25736251058566 4418.909335520467 0.007777319955836461 0.020576853423681454 2.1400555558368635e-05 4.669574952220805 -0.06832984306164391 RLS(ph)PAAYYAQR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSPAAYYAQR 11 1 A0A075B6T1;Q9C0C7-6;Q9C0C7-3 A0A075B6T1 AMBRA1 Activating molecule in BECN1-regulated autophagy protein 1 1 RLS(1)PAAYYAQR;RLS(1)PAAYYAQR 88.311 0.0021055 1333560000.0 328860.0 354090.0 276760.0 360670.0 355280.0 361740.0 288480.0 347370.0 370360.0 284870.0 True False 310617.4802338432 337078.98490007437 294600.39243165706 394947.96836061013 383238.5147333193 359482.24647936027 317642.3736934849 346165.0545467675 303111.96001583186 282346.27342550654 1.1001295553341017 1.1938495975545729 1.0434010297266545 1.398807087371784 1.3573351264167892 1.2731963560843846 1.1250099738868724 1.2260301874963428 1.0735468768133187 1.0 18.107106064332175 -7.8982325603005945 2.5497764442711923 0.998614338980916 1.2198182257702659 0.32443430345758983 0.10464910182071718 0.3251811410432225 4.384903282602686 0.10698599012250616 0.029378893923576874 1.2640592752533182e-08 7.8982325603005945 0.22120388678934988 RLS(ph)PAER ddPTM_KYSE-520_SHP099_60min_R1 4 RLSPAER 7 1 P41212 P41212 ETV6 Transcription factor ETV6 1 RLS(1)PAER;RLS(1)PAER;RLS(1)PAER;RLS(1)PAER 115.7 0.0017855999999999998 3347590000.0 767389.0 710486.0 648621.0 640577.0 707942.0 632900.0 599438.0 656347.0 815537.0 649031.0 True False 724820.4024179543 676353.1860987721 690432.1474902936 701457.2454835026 763653.0077610204 628949.8363376654 660035.0429911094 654070.2854495416 667456.0388147524 643281.0902784774 1.1267553381744493 1.0514115778002704 1.0732977510521946 1.0904366008642359 1.1871218030525876 0.9777216303146609 1.0260445285363187 1.0167721317074525 1.037580692020357 1.0 19.295089754661184 -6.285057996418458 24.97519666948074 1.013573349590464 1.1001230778512823 0.6166036742193897 0.03698107161737464 590.068749907082 623958.3965165612 0.01333370289127337 0.01176718390167986 5.187307621214966e-07 6.285057996418458 0.0865497282608183 RLS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 5 RLSPEK 6 1 Q9NQT8;E7ERX9 Q9NQT8 KIF13B Kinesin-like protein KIF13B;Kinesin-like protein 1 RLS(1)PEK;RLS(1)PEK;RLS(1)PEK;RLS(1)PEK;RLS(1)PEK 106.68 0.0065138999999999996 4004370000.0 3943880.0 3316920.0 3155840.0 3545110.0 3759150.0 3527140.0 3610230.0 3713130.0 3983720.0 3391900.0 True False 3725105.114470133 3157570.18440158 3359270.49592253 3882036.188523812 4054973.718362297 3505125.8109338456 3975187.280849384 3700250.018681059 3260376.8694088776 3361850.404858265 1.1080520147734483 0.939235779152613 0.9992325925829398 1.1547319841816335 1.2061731576462735 1.0426180194896628 1.1824402641785536 1.1006587364309153 0.969816165733387 1.0 21.68082409848754 -3.9117521561518935 21.084998379431553 1.0740547872994957 3.5751036598887924 0.012916153569223932 0.0880521740168225 5856.102746343649 1460010.9905398039 0.02240718314904706 30485.78795871534 0.00012253152645887185 3.9117521561518935 2.5010488725892968 RLS(ph)PGSDIYVTVSSMALAR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSPGSDIYVTVSSMALAR 19 1 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 RLS(0.657)PGS(0.343)DIYVTVSSMALAR;RLS(0.995)PGS(0.005)DIYVTVSSMALAR 146.88 7.253199999999999e-08 39392000.0 81132.0 90259.0 95933.0 70722.0 87643.0 84809.0 71089.0 79232.0 110122.0 73702.0 True False 76631.44622736773 85922.82215847893 102116.99467822711 77443.39761665543 94540.00547954382 84279.67557269883 78275.36988178082 78957.16268488776 90126.62074971243 73049.05761928835 1.0490408600032846 1.176234505396156 1.3979235051933576 1.0601560121455527 1.2941988378859095 1.153740764349643 1.071545238676871 1.0808785938949526 1.23378211419821 1.0 16.15657804098686 -6.523809134850637 20.500200329078314 1.1046270748875462 1.2007457396073673 0.15085697188242264 0.10967198484701143 6.547838306943492 144155.87977714124 0.04065705482225218 0.031931139075831554 2.993579975802247e-07 6.523809134850637 0.09611866471982111 RLS(ph)PIMLGK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSPIMLGK 9 1 Q6ICB0 Q6ICB0 DESI1 Desumoylating isopeptidase 1 1 RLS(1)PIMLGK;RLS(1)PIMLGK 142.1 0.00041303 2902300000.0 3456400.0 3159400.0 2949800.0 2491800.0 2861500.0 2732100.0 2690000.0 2854200.0 3269800.0 2974500.0 True False 3264666.601837426 3007617.6816439168 3139948.8278468777 2728619.922813009 3086683.7702921424 2715047.9504789603 2961931.4518700587 2844299.44637529 2676086.7449502307 2948148.24412598 1.10736175100492 1.0201717934762697 1.0650579848225237 0.925536878360724 1.0469906920190282 0.9209333200555776 1.0046752085047084 0.9647749064323333 0.9077178361984285 1.0 21.491377639784353 -2.743730409848216 0.4634274982221617 0.9595289395458382 1.6354210228642934 0.47619375910366946 0.04566696387876394 15.105699964709418 0.8306309045530005 0.0265394319659919 7.5579780354555375 0.0018041373192671502 2.743730409848216 0.6758920833184552 RLS(ph)PISGSR ddPTM_KYSE-520_SHP099_60min_R1 4 RLSPISGSR 9 1 E9PQ01 E9PQ01 PCF11 1 RLS(1)PISGSR;RLS(1)PISGSR;RLS(0.593)PIS(0.273)GS(0.134)R;RLS(1)PISGSR 104.26 0.0011856 5822740000.0 3522317.0 3370527.0 3300099.0 2932033.0 3083675.0 3419550.0 3037755.0 3219520.0 3872940.0 3417873.0 True False 3326927.0544451447 3208601.8236558326 3512828.6618850906 3210692.534772137 3326342.6787893204 3398207.3200323335 3344840.9210317964 3208352.236561618 3169711.7248723335 3387593.304284959 0.9820916372213047 0.9471626418665072 1.036968829003683 0.9477798089608158 0.981919132554028 1.0031332024815225 0.9873797178666385 0.9470889650488388 0.9356824861068689 1.0 21.691829252403352 -7.254544929824339 24.3123298651355 0.9560392936931321 0.9837026365668018 0.11008426398658067 0.028786809503136664 669.2140040470241 2359900.157867278 0.013377176245562897 0.007509881712835633 5.5648706005394624e-08 7.254544929824339 0.027663342873669672 RLS(ph)PPECLNASLLGGVLR ddPTM_KYSE-520_SHP099_60min_R1 4 RLSPPECLNASLLGGVLR 18 1 Q92754-2;Q92754;C9JXZ2;H7C5E5;C1K3N0;A0A6E1XE14;P05549-2;P05549-5;P05549-6;P05549;Q6VUC0;Q92481;Q92481-2;H7C4N4 Q92754-2 TFAP2C;TFAP2A;TFAP2E;TFAP2B Transcription factor AP-2 gamma;Transcription factor AP-2-alpha;Transcription factor AP-2-epsilon;Transcription factor AP-2-beta 1 RLS(1)PPECLNASLLGGVLR;RLS(1)PPECLNASLLGGVLR;RLS(1)PPECLNASLLGGVLR;RLS(1)PPECLNASLLGGVLR 227.15 6.173300000000001e-19 1340622000.0 546059.0 586261.0 533211.0 412730.0 506114.0 558443.0 394113.0 501026.0 616785.0 494250.0 True False 515768.0187283708 558096.1415642987 567582.6342277651 451955.7351082008 545942.2924052557 554957.5500930866 433953.7882122173 499288.0577463471 504792.3918845584 489871.3295206812 1.0528642679150635 1.1392708818259942 1.1586361561169976 0.922600911448361 1.1144605930284543 1.1328639106846476 0.8858525944697011 1.019222860490488 1.0304591460342798 1.0 18.902043332563558 -6.741125501762789 24.99999513195198 0.985485491278871 1.0862299398836561 0.32725856237704964 0.07225904104616435 303.2854395430884 373248.9251603608 0.028253472178632895 0.02185896135018266 1.8149910935999626e-07 6.741125501762789 0.10074444860478515 RLS(ph)PPFPLEPAQK ddPTM_KYSE-520_SHP099_60min_R1 6 RLSPPFPLEPAQK 13 1 E9PPH6;Q8NEV8-2;Q8NEV8 E9PPH6 EXPH5 Exophilin-5 1 RLS(1)PPFPLEPAQK;RLS(1)PPFPLEPAQK;RLS(1)PPFPLEPAQK;RLS(1)PPFPLEPAQK;RLS(1)PPFPLEPAQK;RLS(1)PPFPLEPAQK 136.35 9.3914e-06 1437570000.0 1596400.0 1464920.0 1386000.0 1248190.0 1325580.0 1454670.0 1257910.0 1387960.0 1700830.0 1452940.0 True False 1507844.5096554977 1394543.044310252 1475343.7776784068 1366817.6023179921 1429895.6044815169 1445590.8649475623 1385071.818818536 1383145.490712299 1392002.146435165 1440068.0819702141 1.047064738489694 0.9683868851549868 1.0244958527654682 0.9491340162528947 0.9929361134962592 1.0038350846369655 0.961809956181769 0.9604722915738559 0.966622456162428 1.0 20.457705588768818 -1.7029953610998483 1.3506769407953083 0.9790560328197966 84.51758531431886 0.4090805842784996 0.023103483018144286 1554.801106147723 2.8847416784250455 0.0062215010518550705 402435.56707350735 0.01981548191524435 1.7029953610998483 83.53852928149907 RLS(ph)PQPQIR ddPTM_KYSE-520_SHP099_60min_R1 5 RLSPQPQIR 9 1 A0A0A0MR27;J3QT39;Q49A88-2;Q49A88-3;Q49A88-6;Q49A88;C9JU82;Q49A88-5 A0A0A0MR27 CCDC14 Coiled-coil domain-containing protein 14 1 RLS(1)PQPQIR;RLS(1)PQPQIR;RLS(1)PQPQIR;RLS(1)PQPQIR;RLS(1)PQPQIR 162.93 8.3471e-05 4052510000.0 2375380.0 2032760.0 2151260.0 1893530.0 1982740.0 2077650.0 1858220.0 2001910.0 2298290.0 2106760.0 True False 2243612.9361973642 1935103.1583650357 2289933.6617377014 2073490.5218894454 2138770.357752594 2064682.6156848632 2046067.0120795483 1994965.8414593076 1880978.4711761172 2088095.7454344784 1.0744779980050803 0.9267310479397538 1.0966612363176027 0.9930054818717166 1.024268337517048 0.9887873294120699 0.9798722192472141 0.9553996007229099 0.9008104514789548 1.0 20.993756434630722 -6.766151655108568 1.4264294108739701 0.946788193042646 1.0206796967067688 0.28415340307384385 0.04852631377195921 0.5268298570988306 2.1710390313566754 0.02764621597086567 0.016215508139839914 1.713358900174289e-07 6.766151655108568 0.07389150366412278 RLS(ph)PS(ph)AS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 5 RLSPSASPPR 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 RLS(1)PS(1)AS(1)PPR;RLS(1)PS(1)AS(1)PPR;RLS(1)PS(1)AS(1)PPR;RLS(1)PS(1)AS(1)PPR;RLS(1)PS(1)AS(1)PPR 88.09200000000001 0.0029415 6227770000.0 6135300.0 5703600.0 5789670.0 5093000.0 5241140.0 5426500.0 5061360.0 5219310.0 6412520.0 5299800.0 True False 5794962.678582667 5429590.494721857 6162881.391999533 5577037.188733716 5653587.899992655 5392631.200642029 5573011.662913398 5201205.431806106 5248168.01447436 5252847.895182011 1.1032039751042273 1.0336470050278739 1.1732457354518524 1.061716862932402 1.0762900454776558 1.026610956237326 1.0609505118214153 0.9901686733736814 0.999109077437414 1.0 22.324668378822757 -6.616075406683968 0.8428008694347215 0.9940649405795304 1.096193646658431 0.5413190293003955 0.03608623916722669 0.48401862477024626 0.6978919630059999 0.026774956570034064 0.017916493287841458 2.420608719212805e-07 6.616075406683968 0.10212870607890057 RLS(ph)PS(ph)ASPPR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSPSASPPR 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RLS(0.997)PS(0.819)AS(0.184)PPR 60.628 0.025879000000000003 0.0 408630.0 406000.0 398720.0 342000.0 372260.0 382980.0 324910.0 316630.0 452140.0 366240.0 True False 385962.4793162903 386495.1505815758 424422.12917455623 374503.5771739509 401554.74413033546 380589.67976078246 357755.0736160223 315531.6844319979 370042.773521866 362995.3985304087 1.0632709970398087 1.064738429595268 1.1692217887412193 1.0317033733488998 1.106225439099324 1.0484697087114725 0.9855636602127689 0.8692443091825179 1.0194145022774082 1.0 18.469591734615314 -6.72147645159867 2.840263787957176 0.9538766052595948 1.08659425383115 0.5517387862063303 0.05025667246759577 0.18050227612731573 2.973318362842266 0.021378431883575733 0.014907205081048862 1.8989938069277962e-07 6.72147645159867 0.1327176485715551 RLS(ph)PSAS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSPSASPPR 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RLS(0.999)PS(0.142)AS(0.859)PPR;RLS(0.989)PS(0.151)AS(0.86)PPR 69.045 0.016919999999999998 0.0 1014710.0 1039920.0 970000.0 870570.0 931380.0 985720.0 915090.0 924970.0 1098230.0 914800.0 True False 958422.0135257645 989960.6822482579 1032527.7520548748 953308.7110535844 1004674.3071727051 979567.7558457309 1007596.2276177589 921761.4949596219 898819.1161253573 906695.5837036313 1.0570493898413438 1.091833576826865 1.138781053545281 1.0514098978618047 1.108061322046871 1.0803711559335434 1.1112839256390474 1.0166162839290007 0.9913129966442535 1.0 19.790258732358662 -7.368935796808325 4.506735581659569 0.9983232693388071 1.0916980167579535 0.7366455085221633 0.02441738724378096 0.11362768253620582 3.7468966712874887 0.013929286839580344 0.0063189429346188365 4.2762609886152305e-08 7.368935796808325 0.09337474741914642 RLS(ph)QPESAEK ddPTM_KYSE-520_SHP099_60min_R1 13 RLSQPESAEK 10 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 RLS(1)QPESAEK;RLS(0.973)QPES(0.027)AEK;RLS(1)QPESAEK;RLS(1)QPESAEK;RLS(0.999)QPES(0.001)AEK;RLS(0.993)QPES(0.007)AEK;RLS(1)QPESAEK;RLS(1)QPESAEK;RLS(1)QPESAEK;RLS(1)QPESAEK;RLS(0.993)QPES(0.007)AEK;RLS(0.994)QPES(0.006)AEK;RLS(1)QPESAEK 190.06 2.1355e-06 79723400000.0 60652490.0 58696050.0 58944220.0 64302490.0 62830100.0 67473830.0 71726710.0 77449750.0 92025860.0 71213540.0 True False 57287975.471958816 55876203.65343271 62743858.73528661 70413779.31635146 67774471.41563255 67052700.79882365 78977545.83203071 77181094.8941576 75316283.607146 70582643.4388958 0.811643949288378 0.791642264033443 0.8889417522255975 0.9976075687404576 0.9602144112710326 0.9499885174585723 1.11893720586425 1.0934854680099102 1.0670652151523363 1.0 26.072810126700535 -5.188775399733396 0.6365772778076122 1.069406390279345 0.7397522775983727 0.7938222275491574 0.0481456972311546 0.597204988087174 0.38221099967788963 0.029135207589491174 0.12416895062180762 6.474773793729098e-06 5.188775399733396 -0.3296541126809722 RLS(ph)QRPTPEELEQR ddPTM_KYSE-520_SHP099_60min_R1 5 RLSQRPTPEELEQR 14 2 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 RLS(0.975)QRPT(0.025)PEELEQR;RLS(0.993)QRPT(0.007)PEELEQR;RLS(0.999)QRPT(0.001)PEELEQR;RLS(0.994)QRPT(0.006)PEELEQR;RLS(1)QRPTPEELEQR 147.16 2.8099e-06 8687070000.0 1973770.0 2046660.0 2085410.0 2140780.0 2021050.0 1840590.0 1936070.0 2027320.0 2217860.0 2021320.0 True False 1864281.043487055 1948335.3815007107 2219838.865373976 2344239.0875510247 2180095.1367985127 1829102.195077808 2131786.8498223308 2020287.700100044 1815152.5317008148 2003412.6773631626 0.930552683704074 0.9725082622842623 1.1080287603528933 1.1701229177787018 1.0881907464356744 0.9129932218883744 1.0640777478897312 1.008423138641157 0.9060302713517163 1.0 20.934028197794845 -6.2394193760487076 24.99239088668786 0.9841921163828117 1.0588261150373375 0.19433636561370604 0.07613955137857285 1546.5485781335403 1755312.7700923907 0.027506501669320924 0.0274867300138297 5.762097782361611e-07 6.2394193760487076 0.0746339986545258 RLS(ph)QRPTTEELEQR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSQRPTTEELEQR 14 2 J3KP75;O75167-5;O75167-2;O75167;O75167-4 J3KP75 PHACTR2 Phosphatase and actin regulator;Phosphatase and actin regulator 2 1 RLS(0.999)QRPT(0.001)TEELEQR;RLS(0.999)QRPT(0.001)TEELEQR 137.13 5.2425e-06 1945200000.0 462370.0 536750.0 521460.0 471220.0 473120.0 484590.0 440970.0 444860.0 581430.0 443770.0 True False 436721.41438825685 510963.7243218252 555074.1459654996 516004.6071225414 510351.85231543647 481565.4940604664 485547.55105246825 443316.8844911045 475856.96865753626 439838.5430478352 0.992913016130923 1.1617074774328149 1.2619952360680946 1.173168234750229 1.1603163487651251 1.0948687914512603 1.1039222431210671 1.0079082233657068 1.0818901075838272 1.0 18.746614507523578 -6.813997016379272 1.3663945044019632 1.031458850813462 1.1575075647169206 0.3563368029597387 0.06674444368864806 0.49188379000894383 1.8407898212983946 0.044258793092634974 0.02461080119591749 1.534627525716505e-07 6.813997016379272 0.12604871390345873 RLS(ph)QSDEDVIR ddPTM_KYSE-520_SHP099_60min_R1 8 RLSQSDEDVIR 11 1 H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7 H0Y917 WDR26 WD repeat-containing protein 26 1 RLS(1)QSDEDVIR;RLS(0.99)QS(0.01)DEDVIR;RLS(0.917)QS(0.083)DEDVIR;RLS(0.999)QS(0.001)DEDVIR;RLS(0.995)QS(0.005)DEDVIR;RLS(0.5)QS(0.5)DEDVIR;RLS(0.999)QS(0.001)DEDVIR;RLS(1)QSDEDVIR 164.06 1.9179e-05 5932760000.0 6641214.0 6394552.0 6184812.0 5744724.0 6059953.0 6134093.0 5760522.0 6202020.0 7631155.0 6362188.0 True False 6272812.6204881165 6087348.12350177 6583494.877569078 6290700.841745756 6536836.824683972 6095807.85026073 6342851.781036949 6180506.64018235 6245529.617762762 6305823.964027361 0.9947649436889512 0.9653533238840915 1.044034041407711 0.9976017214613224 1.0366348413743331 0.9666948974527828 1.0058720029643737 0.9801267329123197 0.9904383080452993 1.0 22.588253465040058 -8.877565401937355 12.20103910687115 1.0000005420402742 0.9982611765008913 0.0004753203497911418 0.02471373823221798 0.0 0.0 0.02344592350459113 0.005686471711740061 1.3256674657898036e-09 8.877565401937355 -0.00173936553938292 RLS(ph)S(ph)ASTGKPPLSVEDDFEK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A 2 RLS(0.979)S(0.625)AS(0.297)T(0.06)GKPPLS(0.038)VEDDFEK 80.061 0.0048748 1178400000.0 513040.0 660650.0 673950.0 902890.0 877730.0 957510.0 1119900.0 1513100.0 1711900.0 1428000.0 True False 484580.6484801152 628911.3823441329 717393.8953581267 988700.3941362225 946802.3573994498 951533.8249196991 1233110.4211707364 1507851.4092601934 1401062.1134871552 1415349.0309671897 0.3423753702286236 0.4443507351076232 0.5068671258197633 0.6985558844524636 0.6689532664267591 0.672296235133931 0.8712412233243138 1.0653565843259112 0.9899057284334511 1.0 20.43272644086345 -5.899050187852882 0.44687570819209976 1.0699937997099607 0.2836997669090961 0.917277208884133 0.0682070867887502 0.4124957779772522 0.15903386061618088 0.06978490634181646 0.14530310404955585 1.2616817239523255e-06 5.899050187852882 -0.7862940328008645 down RLS(ph)S(ph)GKADGHVK ddPTM_KYSE-520_SHP099_60min_R1 4 RLSSGKADGHVK 12 2 E7EPJ7;O75962-4;O75962;O75962-5;O75962-2;E7EWP2;A0A1W2PRD7 E7EPJ7 TRIO Triple functional domain protein 2 RLS(1)S(1)GKADGHVK;RLS(1)S(1)GKADGHVK;RLS(1)S(1)GKADGHVK;RLS(1)S(1)GKADGHVK 89.311 0.0022389 6071500000.0 9080400.0 8330700.0 8068800.0 8698300.0 8686900.0 7832600.0 7464000.0 7690500.0 9073800.0 6959670.0 True False 8576692.110671371 7930480.66736437 8588927.75853647 9524983.816760741 9370509.60830013 7783713.838044556 8218533.96162011 7663823.450476187 7426226.651883732 6898012.738341334 1.2433569545326304 1.1496761412579384 1.245130747700203 1.3808301286278977 1.3584361125075746 1.1283994584092625 1.1914350224288368 1.11101903420361 1.0765747953184281 1.0 22.717749362304573 -7.2886758785003405 0.9643538385886836 1.0175593821894153 1.2641183907995162 0.6164974579225351 0.07095405746467316 0.4244542570422036 0.7064402306997409 0.07113081231379409 0.02878828371922851 5.1442743446383895e-08 7.2886758785003405 0.24655900861010083 RLS(ph)S(ph)LRAS(ph)TS(ph)KSES(ph)SQK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSLRASTSKSESSQK 17 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 5 RLS(0.996)S(0.969)LRAS(0.759)T(0.334)S(0.478)KS(0.477)ES(0.566)S(0.422)QK 46.403 0.044512 1192700000.0 1011700.0 1019500.0 915870.0 1010100.0 914240.0 922910.0 989840.0 1136600.0 1211900.0 1035800.0 True False 955578.9842260515 970521.6896993015 974908.4456438129 1106099.6003023612 986185.4866859647 917149.7763539178 1089902.687107458 1132657.3998844328 991849.5095128707 1026623.6178402066 0.9307977798488432 0.9453529734111014 0.9496259668122664 1.0774149172891179 0.9606105582888158 0.8933651636452724 1.0616380416031894 1.1032839886026569 0.9661276949769643 1.0 19.969475925077838 -6.788231227418732 24.999939015228986 1.0413694584304627 0.9638411687041571 0.28591625302423196 0.05579341309540625 292.2797600961479 272728.5439239921 0.024097365137914165 0.016251403211343458 1.628428792419281e-07 6.788231227418732 -0.07752828972630554 RLS(ph)S(ph)LRAS(ph)TSK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSSLRASTSK 11 2 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 3 RLS(1)S(0.988)LRAS(0.957)T(0.03)S(0.025)K;RLS(1)S(1)LRAS(0.506)T(0.425)S(0.069)K 83.499 0.011781 28420800000.0 15964600.0 15169900.0 14447000.0 16342100.0 14738400.0 14800400.0 15487400.0 18290300.0 17123100.0 14478900.0 True False 15079011.813358922 14441115.233515887 15378276.736017277 17895248.270568486 15898228.229975106 14708025.21367037 17053017.534458116 18226855.21828809 14013976.678224139 14350628.210413758 1.0507562172376956 1.0063054398577802 1.071610002749412 1.2470010377373248 1.1078419701820654 1.0249046242447604 1.1883115696693562 1.2701085242429657 0.9765409898958066 1.0 23.774610557642877 -5.006251926554858 24.247588524097687 1.1289963015089632 1.0311375053639487 0.11343428521910048 0.09461651780077801 345.496785548947 1340013.004129083 0.024607248666281663 0.048500661283090295 9.85707528236632e-06 5.006251926554858 -0.09785879614501458 RLS(ph)S(ph)LRAS(ph)TSKS(ph)ES(ph)SQK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSLRASTSKSESSQK 17 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 5 RLS(1)S(1)LRAS(0.864)T(0.044)S(0.132)KS(0.948)ES(0.594)S(0.418)QK 85.46700000000001 0.00078174 26351000000.0 2490700.0 3005100.0 2582200.0 2703700.0 2594200.0 2333000.0 2570000.0 3052900.0 2816200.0 2733900.0 True False 2352535.9059126475 2860730.4852529415 2748652.7436660775 2960658.8351029544 2798348.7810210995 2318438.8816175894 2829800.6807829146 3042310.2024522135 2304849.0706247594 2709679.772942017 0.8681970206975407 1.0557448573146053 1.0143828695601718 1.092623144870155 1.032723057892118 0.8556136059946153 1.0443302965318582 1.1227563614090994 0.8505983229606076 1.0 21.36969093481986 -7.776944353800976 24.99993354049963 0.9252992759802899 1.0118177361010638 0.12965451742345802 0.08857441908205965 570.506069927626 919846.6519546154 0.08317242783726442 0.021789761089250112 1.6713047450501925e-08 7.776944353800976 0.08651846012077391 RLS(ph)S(ph)LRAS(ph)TSKS(ph)ESS(ph)QK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSLRASTSKSESSQK 17 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 5 RLS(1)S(0.995)LRAS(0.939)T(0.1)S(0.258)KS(0.681)ES(0.329)S(0.699)QK 83.992 0.0013502 26505000000.0 3902700.0 4078900.0 3843900.0 4166100.0 3516100.0 3791500.0 4089100.0 4808900.0 4832500.0 4202100.0 True False 3686209.451160431 3882943.521446276 4091683.9444574583 4562044.89141636 3792797.066127633 3767835.842114485 4502466.133770207 4792219.0483057 3955039.8174114623 4164872.66318433 0.8850713453366595 0.9323078603986659 0.9824271413208312 1.0953623940877857 0.9106633918617287 0.9046701176294107 1.0810573330536746 1.1506279869410752 0.9496184246813356 1.0 21.98984095663149 -6.771735435129441 24.999991839316714 1.05787828497999 0.9569212496793641 0.27006071841925605 0.07393550102014868 282.02170912167304 684774.1710225383 0.03175115895698085 0.021674724812406607 1.6914710334646115e-07 6.771735435129441 -0.10095703530062583 RLS(ph)S(ph)LRAS(ph)TSKS(ph)ESSQK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSSLRASTSKSESSQK 17 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 4 RLS(0.993)S(0.987)LRAS(0.914)T(0.12)S(0.329)KS(0.605)ES(0.041)S(0.011)QK;RLS(0.999)S(0.999)LRAS(0.451)T(0.243)S(0.296)KS(0.409)ES(0.285)S(0.318)QK 58.812 0.016074 10351300000.0 3931900.0 3761700.0 3688900.0 3916200.0 3529500.0 3327600.0 3959900.0 4315800.0 4679100.0 4113400.0 True False 3713789.6689516753 3580982.2855731864 3926692.396448687 4288394.470551532 3807251.5698920605 3306831.2140894537 4360205.3368997155 4300829.4971152935 3829493.390512152 4076958.476176773 0.9109216320580079 0.8783465189793408 0.963142602357579 1.0518612086952221 0.9338460502208416 0.8111025004087072 1.0694750418426044 1.0549112830671894 0.9393015437585018 1.0 21.959061832376065 -6.798283600923879 24.999969703454596 1.0204978861944543 0.9306750364472887 0.30940285657558153 0.06616077700505381 237.65810417463334 161256.4844134497 0.029425275898534265 0.019839123596348894 1.5911693298638522e-07 6.798283600923879 -0.08982284974716559 RLS(ph)S(ph)LRAS(ph)TSKSES(ph)S(ph)QK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSLRASTSKSESSQK 17 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 5 RLS(1)S(1)LRAS(0.957)T(0.043)S(0.006)KS(0.477)ES(0.612)S(0.906)QK 92.426 0.00057404 792740000.0 781380.0 798890.0 787820.0 803310.0 792170.0 754040.0 757830.0 1041700.0 979900.0 889890.0 True False 738035.2937575872 760510.1252416624 838604.1377565687 879656.3408760427 854509.2721692575 749333.7566630647 834438.8521080614 1038086.5858346075 801974.861268803 882006.2669239447 0.8367687639358099 0.8622502512300642 0.9507915864149766 0.9973357036837193 0.9688244904987072 0.8495787215621674 0.9460690738833661 1.1769605554561458 0.9092620895605917 1.0 19.750429381044977 -1.9187429735974237 0.331110055301567 1.0079051191288764 1.356234984458065e-12 0.2818620003878797 0.07989567493471791 42.75644403916547 1.0681825640906208 0.07654200231220094 23.644654689231007 0.012057493220415121 1.9187429735974237 -1.0079051191275201 RLS(ph)S(ph)LRAS(ph)TSKSESSQK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSLRASTSKSESSQK 17 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 3 RLS(1)S(0.998)LRAS(0.842)T(0.128)S(0.027)KS(0.005)ESSQK 70.315 0.011652 1129100000.0 1418800.0 1746400.0 1811500.0 1453500.0 1407200.0 1406900.0 1091800.0 1404100.0 2511200.0 1265700.0 True False 1340096.3356923203 1662500.3226001568 1928272.188502478 1591640.2029892912 1517938.6341272418 1398119.015236943 1202169.7989411622 1399229.5048194036 2055229.3822004457 1254486.8826996982 1.0682426051425804 1.3252432891306123 1.5371003197361226 1.2687579479221238 1.2100075776484698 1.1144947265037508 0.9582960296516231 1.1153799406879523 1.6383028077404227 1.0 20.258665954887494 -5.772781546920853 3.276755141555602 1.1611510671486054 1.32250213899208 0.08708988205346646 0.2028983938120155 0.576400260574714 12.879497428156384 0.06643912348820194 0.0818674112929235 1.6874015864331792e-06 5.772781546920853 0.16135107184347453 RLS(ph)S(ph)LRAST(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSSLRASTSK 11 2 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 3 RLS(1)S(1)LRAS(0.113)T(0.879)S(0.008)K;RLS(0.994)S(0.996)LRAS(0.218)T(0.641)S(0.151)K 114.29 0.0006352 10371000000.0 6886140.0 5740650.0 6079150.0 6623380.0 5898470.0 6472560.0 6977170.0 7732550.0 7084470.0 6411470.0 True False 6504152.087020232 5464860.557108682 6471021.735983906 7252864.0438081855 6362646.031296562 6432162.352165775 7682490.434217182 7705727.58884073 5798108.832955396 6354669.363848173 1.0235232888783277 0.8599755934114166 1.0183097444530576 1.1413440461701845 1.0012552450791175 1.0121946530780124 1.208952031072302 1.2126087366053615 0.9124170749057283 1.0 22.599385632470096 -4.995556088363928 23.070084745078034 1.0792684620663977 0.9410976366279019 0.2081109773143367 0.09825143333543447 66.84733901945316 346999.7689306751 0.025773981756483832 0.05322329657378791 1.0102850155802084e-05 4.995556088363928 -0.1381708254384958 RLS(ph)S(ph)LRAST(ph)SKS(ph)ES(ph)SQK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSLRASTSKSESSQK 17 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 5 RLS(0.988)S(0.854)LRAS(0.487)T(0.546)S(0.198)KS(0.9)ES(0.57)S(0.458)QK 43.888000000000005 0.05717100000000001 9293200000.0 1423600.0 1407200.0 1302100.0 1313300.0 1219300.0 1289900.0 1271500.0 1513400.0 1561600.0 1374100.0 True False 1344630.0701237577 1339595.9997497362 1386035.4494336625 1438115.6371419579 1315251.9731319982 1281849.25563589 1400035.6286441546 1508150.368630217 1278052.8047324866 1361926.5430336236 0.9872999957315327 0.9836037094672174 1.017702060748693 1.055942146438109 0.9657290107602572 0.9412029321204318 1.0279817482120914 1.1073654275588807 0.938415372892056 1.0 20.377217461470764 RLS(ph)S(ph)LRASTS(ph)KS(ph)ES(ph)SQK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSSLRASTSKSESSQK 17 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 5 RLS(0.73)S(0.936)LRAS(0.539)T(0.352)S(0.693)KS(0.733)ES(0.637)S(0.38)QK;RLS(0.999)S(0.981)LRAS(0.472)T(0.514)S(0.518)KS(0.518)ES(0.549)S(0.45)QK 49.593 0.03717 35236000000.0 6470400.0 6813700.0 6558000.0 7318400.0 6463700.0 6529400.0 6614700.0 8080300.0 8259900.0 7428500.0 True False 6111474.0135773765 6486359.624427785 6980739.173171001 8013938.535642816 6972356.416577793 6488647.592642052 7283378.429250883 8052271.325256192 6760110.375134394 7362689.269285541 0.8300600215565556 0.8809769619759068 0.9481235616301373 1.0884526349732087 0.9469850161494557 0.8812877136768935 0.9892280066244933 1.0936589920815125 0.9181577719618174 1.0 22.81180138544553 -4.738224506185585 2.83648938125248 0.9876412528588216 0.8415460418247729 0.411764913521834 0.06331606648886297 0.26465387427120257 4.219431658107526 0.0176994005168464 0.05559263597312212 1.8271554338357665e-05 4.738224506185585 -0.14609521103404877 RLS(ph)SAS(ph)TGKPPLSVEDDFEK ddPTM_KYSE-520_SHP099_60min_R1 5 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A 2 RLS(0.774)S(0.235)AS(0.416)T(0.377)GKPPLS(0.199)VEDDFEK;RLS(0.96)S(0.063)AS(0.948)T(0.028)GKPPLS(0.001)VEDDFEK;RLS(0.987)S(0.013)AS(0.541)T(0.409)GKPPLS(0.05)VEDDFEK;RLS(0.989)S(0.012)AS(0.512)T(0.069)GKPPLS(0.419)VEDDFEK;RLS(0.758)S(0.247)AS(0.962)T(0.032)GKPPLSVEDDFEK 174.55 2.8015999999999995e-09 11038800000.0 3418160.0 4050050.0 3965550.0 5504070.0 4931820.0 5557680.0 6889770.0 8738960.0 9201480.0 7695850.0 True False 3228547.8508669757 3855479.518751014 4221175.698104338 6027175.157941012 5319926.175782704 5522992.457603284 7586255.189275387 8708646.587448597 7530723.182434602 7627670.756280707 0.42326785646962467 0.505459614335919 0.5534029762137512 0.7901724327807634 0.6974509448250921 0.7240732635261679 0.9945703520342408 1.1417176836425198 0.9872900159244187 1.0 22.86281114127421 -5.906150870273342 0.5383919881486092 1.0834032249704708 0.39872710140910156 0.8621029916605296 0.08567056051285662 0.39518575371881404 0.23864436705338876 0.07502162526619224 0.13364882663600353 1.2412210428712381e-06 5.906150870273342 -0.6846761235613692 down RLS(ph)SASTGKPPLSVEDDFEK ddPTM_KYSE-520_SHP099_60min_R1 7 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 RLS(0.777)S(0.173)AS(0.041)T(0.01)GKPPLSVEDDFEK;RLS(0.818)S(0.14)AS(0.035)T(0.007)GKPPLSVEDDFEK;RLS(0.84)S(0.158)AS(0.001)TGKPPLSVEDDFEK;RLS(0.82)S(0.175)AS(0.006)TGKPPLSVEDDFEK;RLS(0.936)S(0.057)AS(0.006)TGKPPLSVEDDFEK;RLS(0.473)S(0.473)AS(0.05)T(0.004)GKPPLSVEDDFEK;RLS(0.981)S(0.019)ASTGKPPLSVEDDFEK 288.57 4.955199999999999e-44 17357750000.0 3624570.0 3740200.0 3342970.0 3970280.0 3990390.0 4539630.0 4877370.0 5657740.0 6525700.0 5342080.0 True False 3423507.8766988395 3560515.177845346 3558463.1951411134 4347614.217491796 4304410.990786676 4511296.48527975 5370422.1581440335 5638114.620466445 5340797.379509974 5294753.327275351 0.6465849615813087 0.6724610114514185 0.6720734612526846 0.8211174248846552 0.812957795146559 0.85203147463741 1.0142912853897996 1.0648493465072877 1.0086961656924474 1.0 22.33613204262466 -6.080391679784285 0.7212259896041281 1.0469500959691254 0.6425811184695799 0.9284103049418092 0.040328256204423145 0.1766829947668933 0.20448117623765308 0.02890485579840448 0.03520461061478742 8.310139614612884e-07 6.080391679784285 -0.4043689774995455 RLS(ph)SDCSVTQER ddPTM_KYSE-520_SHP099_60min_R1 2 RLSSDCSVTQER 12 1 E7EX48;P51957-3;P51957;P51957-2 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 RLS(0.333)S(0.333)DCS(0.333)VTQER;RLS(0.691)S(0.303)DCS(0.004)VT(0.002)QER 214.11 1.151e-10 256420000.0 657790.0 623170.0 633410.0 521750.0 585790.0 584770.0 584940.0 515570.0 625430.0 720360.0 True False 621301.0774281446 593231.9778027607 674240.6220918336 571336.9631301421 631888.3403108281 581120.2335205827 644071.4436642651 513781.60800494225 511867.6778072735 713978.1708315999 0.8701961807942806 0.8308825143936808 0.9443434682414978 0.8002162901768864 0.8850247334240507 0.8139187684740108 0.9020884250762016 0.7196040845429764 0.7169234280805533 1.0 19.44552044040768 -7.246806158186555 24.895571575003114 0.7886978076321366 0.8620921876443755 0.052622098756014646 0.08405594769849371 1411.6806343930002 2401705.22916368 0.037266968333433535 0.021393917424770086 5.664920791473377e-08 7.246806158186555 0.07339438001223886 RLS(ph)SEVEALRR ddPTM_KYSE-520_SHP099_60min_R1 3 RLSSEVEALRR 11 2 P15924 P15924 DSP Desmoplakin 1 RLS(0.683)S(0.317)EVEALRR;RLS(0.756)S(0.244)EVEALRR;RLS(0.575)S(0.425)EVEALRR 92.26899999999999 0.0020298 1853940000.0 657960.0 624850.0 553010.0 565080.0 551960.0 527090.0 458550.0 469670.0 710610.0 557090.0 True False 621461.6471892572 594831.268081029 588657.9094472843 618785.0333025035 595396.1117771976 523800.23579589237 504904.7090167338 468040.82439180184 581581.1370203327 552154.6160094616 1.1255210572732186 1.0772911261341986 1.066110637092269 1.1206734768869526 1.0783141071612359 0.9486477530180001 0.9144263117200525 0.8476626126472184 1.0532939871508145 1.0 19.074712785852725 -6.249362980267303 4.377689883717809 0.9396743833643484 1.0941636051416006 0.6326931431916409 0.05332709375696689 0.1251918942397411 6.167762655651791 0.018156919834388215 0.01720410874734441 5.631667682550949e-07 6.249362980267303 0.15448922177725222 RLS(ph)SFVTK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSSFVTK 8 1 F8VPD4;P27708;H7C3Z5 F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 RLS(0.992)S(0.008)FVTK;RLS(0.809)S(0.189)FVT(0.002)K 119.74 0.0010087 6928170000.0 3723900.0 3436640.0 3029340.0 2779260.0 2611940.0 3046500.0 2955430.0 2762590.0 3276780.0 2754480.0 True False 3517327.8435893925 3271538.6558981896 3224616.103515374 3043400.034785015 2817484.8180943085 3027485.663458203 3254193.7066172226 2753007.2200833517 2681799.352901713 2730077.4501530123 1.288361926652395 1.1983318113245578 1.1811445508018992 1.1147669215810863 1.0320164425871499 1.1089376469112706 1.1919785302921846 1.008398944846438 0.982316216981832 1.0 21.380510449175055 -1.0000000000000386 0.23024447801693407 0.9983736440533268 2.6019096337909695 0.7055493108398425 0.05322918587997024 31.197814117089447 0.40834902300831827 0.08488995807038975 18.866976599179882 0.09999999999999111 1.0000000000000386 1.6035359897376427 RLS(ph)SLR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSLR 6 1 A2A3R5;P62753;Q9Y253-2;Q9Y253 A2A3R5 RPS6;POLH 40S ribosomal protein S6;DNA polymerase eta 1 RLS(0.5)S(0.5)LR 80.676 0.025419999999999998 22313000000.0 26182000.0 19670000.0 17490000.0 16992000.0 17295000.0 20941000.0 17938000.0 20000000.0 20336000.0 17289000.0 True False 24729632.267477 18725023.674728084 18617433.384989437 18606914.571168903 18656018.10491092 20810299.451330453 19751348.098009314 19930624.668035083 16643495.028842121 17135832.910638478 1.4431532097937325 1.0927407948231675 1.086462121921785 1.0858482729262102 1.0887138198767488 1.2144317442784325 1.1526342606753035 1.1630963474008613 0.9712685175932886 1.0 24.03051298194219 -4.260189025160398 24.980940581685008 1.104899188768731 1.443153319894898 0.6943129201908711 0.0690192588732017 61.21470814282193 1222873.4752205808 0.017060397086500152 0.10311011631922276 5.493017401514171e-05 4.260189025160398 0.3382541311261671 RLS(ph)SLRAS(ph)TS(ph)KSES(ph)SQK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSLRASTSKSESSQK 17 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 4 RLS(0.798)S(0.204)LRAS(0.816)T(0.232)S(0.475)KS(0.475)ES(0.598)S(0.402)QK 74.579 0.0073068 807060000.0 605440.0 449890.0 431820.0 419770.0 380150.0 467120.0 338540.0 418530.0 548460.0 385260.0 True False 571855.0362852822 428276.6091013423 459655.8081364286 459664.81459154724 410065.64224237617 464204.5308106336 372762.9270320033 417078.2171156364 448873.48955147195 381846.8961277443 1.4976029452756687 1.121592484957807 1.2037699213945001 1.2037935079555275 1.0739006821864843 1.2156823468203264 0.9762104414416871 1.0922655685961258 1.1755326391374001 1.0 18.542634771144517 -1.5221571676734413 1.0992270808379911 1.1110084762227221 199.999999765863 0.6558373128073569 0.08167956917951963 531.2345403296645 1.601060627644225 0.024251895451546213 265196.3274119899 0.030049886246601897 1.5221571676734413 198.88899128964027 RLS(ph)SLRAST(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSLRASTSK 11 2 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 2 RLS(0.474)S(0.53)LRAS(0.397)T(0.575)S(0.023)K 77.191 0.039675 687010000.0 1532200.0 1249300.0 1233200.0 1141400.0 1081900.0 1144300.0 1056500.0 1095800.0 1558900.0 906360.0 True False 1447205.8116350232 1189281.75276247 1312694.0451897641 1249878.3128255776 1167039.3748310586 1137157.9992434669 1163301.3304463632 1091998.9255616434 1275843.0566710243 898330.3555374098 1.6109951118920596 1.3238801799712132 1.4612598106010442 1.3913348303563233 1.299120493521449 1.2658572564468034 1.2949593913593618 1.2155872489785509 1.4202381660672865 1.0 19.776886559326403 -1.7004510385043736 0.0344043734679189 5.44866450345647e-13 3.2546664060127988 0.6559302611282423 0.0901852596515415 575.4366224148438 1.7088883301250957 50.97275420056861 125.8044233224371 0.019931912019081774 1.7004510385043736 3.254666406012254 RLS(ph)SQFENSVYKGDDDDEDVIILEENSTPKPAVDHDIDMK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSQFENSVYKGDDDDEDVIILEENSTPKPAVDHDIDMK 40 3 Q14149 Q14149 MORC3 MORC family CW-type zinc finger protein 3 1 RLS(0.578)S(0.133)QFENS(0.29)VYKGDDDDEDVIILEENSTPKPAVDHDIDMK 253.3 3.2443e-32 1579600000.0 194180.0 176770.0 207480.0 282880.0 243150.0 244580.0 313060.0 400600.0 538260.0 282250.0 True False 183408.4483117667 168277.70386282043 220854.49277973763 309764.83014902705 262284.5216657469 243053.48549765543 344707.1599711675 399210.41210074245 440525.55243039667 279749.4845871772 0.6556167514746997 0.6015299871281111 0.7894723849291441 1.1072936581318213 0.9375692757854295 0.8688254988434613 1.2321994461575059 1.4270282309540345 1.5747144380997686 1.0 18.09377594760735 -5.886638858863969 0.5882957162469951 1.357231001589363 0.5929317582609975 0.6205368528721011 0.18655005290278728 0.6452849377657863 0.47673833737307936 0.14852884117336929 0.2546662026865827 1.2982583996557652e-06 5.886638858863969 -0.7642992433283654 RLS(ph)SSLNPSK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSSLNPSK 10 1 A0A590UJ01;Q13535-2;Q13535-3;Q13535 A0A590UJ01 ATR Serine/threonine-protein kinase ATR 1 RLS(0.498)S(0.498)S(0.004)LNPSK 203.93 7.4904e-07 1246800000.0 1513100.0 1558900.0 1525000.0 1521200.0 1780800.0 1826500.0 2090100.0 2160300.0 2462800.0 1970600.0 True False 1429165.3267099292 1484008.104043395 1623303.940086271 1665774.390634542 1920938.828634021 1815100.135994225 2301387.705410264 2152806.4235178116 2015617.6021357372 1953142.0171036029 0.7317262719222533 0.7598055292692405 0.8311243759394092 0.8528690571639995 0.9835121111585438 0.9293231726620238 1.1783002389263477 1.1022272854025739 1.031987220839569 1.0 20.897365423782883 -5.729325847978031 0.8975278894050627 1.0800820095730654 0.7393553606815917 0.8152573809854322 0.0596296118205593 0.2433928455504415 0.421029764495015 0.029818292898898768 0.05042334043814528 1.8649798849809084e-06 5.729325847978031 -0.34072664889147375 RLS(ph)SSLNPSKR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSSLNPSKR 11 2 A0A590UJ01;Q13535-2;Q13535-3;Q13535 A0A590UJ01 ATR Serine/threonine-protein kinase ATR 1 RLS(0.416)S(0.416)S(0.166)LNPS(0.001)KR 69.20100000000001 0.019295 1591300000.0 692940.0 772460.0 736690.0 627340.0 693120.0 907420.0 764320.0 814640.0 1186700.0 765560.0 True False 654501.2368583564 735349.8621139016 784178.2161456749 686962.2049833522 747664.6006866653 901756.4551896411 841584.9246443587 811814.2039784049 971225.1942725674 758777.7339966665 0.8625730665697575 0.96912419693793 1.0334755238733981 0.9053536684121654 0.9853539016604169 1.1884329425955489 1.1091323413136105 1.069897240793272 1.2799864186273477 1.0 19.533317818547424 -6.143903277927829 5.1436129180313905 1.1319889304556103 0.950639944070476 0.5559897110233909 0.0801162263862766 0.17461732301044022 6.687123227019234 0.0258255128150925 0.025890703383242435 7.17954169615971e-07 6.143903277927829 -0.1813489863851343 RLS(ph)SSSATLLNS(ph)PDR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 2 RLS(0.98)S(0.017)S(0.003)S(0.002)ATLLNS(0.998)PDR;RLS(0.942)S(0.058)SS(0.006)AT(0.01)LLNS(0.983)PDR 202.21 1.6474e-11 667130000.0 691120.0 636100.0 629390.0 614750.0 548290.0 590370.0 534550.0 575780.0 716580.0 601860.0 True False 652782.195886436 605540.8011944349 669961.4864596055 673175.6551686726 591437.3036566417 586685.2818433671 588587.5307052567 573782.7535680623 586467.1355117859 596527.9886399951 1.0943027122242714 1.01510878404044 1.1231015127840507 1.1284896400308457 0.9914661422761413 0.9835000084085442 0.9866888761534198 0.9618706322166225 0.983134315036673 1.0 19.186230304100533 -5.8288139387645295 7.560788398730701 0.9820344781404333 1.0870578447561192 0.7474822855386944 0.03010084484082805 0.12443575298283817 11.90792292642459 0.009831191735588678 0.011199253441985592 1.4831533643268339e-06 5.8288139387645295 0.1050233666156859 RLS(ph)SSSATLLNSPDR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSSSSATLLNSPDR 15 1 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;A0A087WZ40 Q14244-5 MAP7 Ensconsin 1 RLS(0.448)S(0.361)S(0.182)S(0.009)ATLLNSPDR;RLS(0.942)S(0.051)S(0.003)S(0.003)AT(0.001)LLNSPDR 144.94 7.0024e-06 1311180000.0 482110.0 500600.0 441410.0 419610.0 374510.0 399710.0 465250.0 403350.0 427580.0 443650.0 True False 455366.39723754156 476550.42458408105 469863.9948809714 459489.6082396537 403981.8063295865 397215.26162510423 512282.01040243334 401950.87299259775 349942.2504146491 439719.6061544775 1.0355835647627847 1.083759782175063 1.0685536607978856 1.0449604743760978 0.9187259350624998 0.9033376180309751 1.16501971536485 0.9141072341709247 0.795830446304255 1.0 18.746224335100237 -5.661478610749831 5.756832376657435 0.9539390154686972 1.063156473982428 0.2658540098722444 0.08852878980345262 0.31812758329003077 15.401257892330403 0.02757619629952243 0.03564417391788396 2.180325776825889e-06 5.661478610749831 0.10921745851373077 RLS(ph)STSLASGHSVR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSSTSLASGHSVR 14 1 Q9BZL6-2;Q9BZL6;Q9BZL6-3;M0QZ82 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 RLS(0.92)S(0.076)T(0.004)SLASGHSVR;RLS(0.742)S(0.192)T(0.064)S(0.002)LASGHSVR 149.12 2.0154e-06 2710300000.0 401730.0 767000.0 1185500.0 1411560.0 485120.0 639880.0 383020.0 371150.0 470870.0 552890.0 True False 379445.2360710994 730152.1687095294 1261919.2268670648 1545714.2379990113 523296.18404477567 635886.2715685652 421739.39951497014 369862.56727706123 385371.8776667426 547991.8247419113 0.6924286438941082 1.3324143458771682 2.302806665886655 2.8206884997362858 0.9549342899252803 1.1603937191363205 0.769608925668914 0.6749417611316667 0.7032438446472115 1.0 19.063794844826482 -5.9619064416881535 24.999989969426494 0.8602460296921057 1.8034920715946838 0.4059088632153359 0.540111289644919 177.38437203027064 116412.83627755947 0.18308514445422125 0.2075986713176248 1.0916754863742904e-06 5.9619064416881535 0.9432460419025781 RLS(ph)TIFEECDEELER ddPTM_KYSE-520_SHP099_60min_R1 3 RLSTIFEECDEELER 15 1 Q5T5P2-3;Q5T5P2;A0A0U1RRK8 Q5T5P2-3 KIAA1217 Sickle tail protein homolog 1 RLS(0.966)T(0.034)IFEECDEELER;RLS(0.843)T(0.157)IFEECDEELER;RLS(0.926)T(0.074)IFEECDEELER 106.74 0.00033289 299557000.0 1228490.0 1169070.0 1077310.0 1029820.0 1035510.0 1065160.0 1012960.0 1096810.0 1177680.0 1094760.0 True False 1160343.2107658987 1112906.122390154 1146755.126356946 1127693.783173328 1116998.745754051 1058511.9413389598 1115359.8823369131 1093005.422107379 963842.9988968717 1085061.2781103915 1.0693803512983238 1.025662001622852 1.0568574784587217 1.039290412369318 1.0294337917018639 0.9755319470825955 1.0279234038093092 1.0073213782090003 0.8882843930947213 1.0 20.049345089532736 -6.574684426642967 0.7157608060737084 0.9614528018749197 1.0514421389618844 0.4736942743376922 0.035239410859189385 0.6444232079602569 0.6808293424532113 0.02818840883128774 0.02107502004560283 2.662659137041164e-07 6.574684426642967 0.08998933708696477 RLS(ph)TLILHGGGTVCR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSTLILHGGGTVCR 15 1 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 RLS(0.5)T(0.5)LILHGGGTVCR;RLS(0.869)T(0.131)LILHGGGTVCR 119.62 8.4979e-05 1942490000.0 565590.0 501590.0 509650.0 480120.0 523290.0 543420.0 556390.0 517490.0 681670.0 512190.0 True False 534215.5952242877 477492.8634980604 542502.8544688314 525750.4604466587 564469.9458871834 540028.3142085858 612635.3310431158 515694.94797307433 557895.9115023017 507652.3950777901 1.0523255684481252 0.9405901914929246 1.0686502412456875 1.0356505072060092 1.1119221564997972 1.0637757635829426 1.206800828644251 1.0158426375473948 1.098972282829105 1.0 18.95348145263457 -4.900974662918819 7.656957299203719 1.0808631638018635 0.9968096884870385 0.2116419150939779 0.06042366908439595 0.30494961323835373 20.678007371692605 0.015196245060621066 0.03191965742854141 1.2561032436070598e-05 4.900974662918819 -0.08405347531482499 RLS(ph)TPQR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSTPQR 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 RLS(0.922)T(0.078)PQR;RLS(0.811)T(0.189)PQR 132.88 0.0012527999999999999 942580000.0 319270.0 307700.0 304210.0 246090.0 291830.0 317090.0 252540.0 282070.0 325350.0 329830.0 True False 301559.45665103436 292917.630132884 323819.8633532094 269478.31961034326 314795.36071443546 315110.9236914369 278069.2077528866 281091.5650056332 266274.6414060673 326907.96280385664 0.9224598081508608 0.8960247637303143 0.9905536120192334 0.8243247343963569 0.962947974758606 0.9639132708446814 0.8506039601113262 0.8598492450129975 0.8145247950593083 1.0 18.318524993046193 -6.774346028300623 24.96919959235485 0.8695652656890496 0.9252056206004861 0.10204111022025686 0.06223002106206666 431.85423797364786 835457.071324306 0.02477019423691246 0.016819581471614935 1.6813339083079413e-07 6.774346028300623 0.055640354911436485 RLS(ph)TSPDVIQGHQPR ddPTM_KYSE-520_SHP099_60min_R1 6 RLSTSPDVIQGHQPR 15 1 Q9Y385 Q9Y385 UBE2J1 Ubiquitin-conjugating enzyme E2 J1 1 RLS(0.951)T(0.049)SPDVIQGHQPR;RLS(0.977)T(0.022)S(0.001)PDVIQGHQPR;RLS(0.764)T(0.176)S(0.06)PDVIQGHQPR;RLS(0.629)T(0.371)S(0.001)PDVIQGHQPR;RLS(0.707)T(0.049)S(0.244)PDVIQGHQPR;RLS(0.803)T(0.163)S(0.034)PDVIQGHQPR 294.39 1.9982e-33 22057930000.0 3939990.0 4503570.0 3783510.0 4813370.0 4302240.0 3780990.0 4362110.0 4979100.0 5548600.0 4098860.0 True False 3721430.9005246563 4287211.737203618 4027401.1084300433 5270831.237607534 4640801.811602896 3757391.438922973 4803074.648891037 4961828.664230673 4541114.108823429 4062547.2892648266 0.916033866327769 1.055301374222144 0.9913487331144043 1.2974202790292597 1.1423379178541728 0.9248855881263905 1.1822815359178795 1.2213589925075268 1.117799692036374 1.0 21.953953175851897 -5.118051518591128 23.62054847480457 1.1314606390056692 0.9942928575029607 0.27107215745947555 0.10407867524702903 16.13814556803769 3177.2913022880402 0.02879215781595254 0.04986952329242419 7.6198861304835635e-06 5.118051518591128 -0.13716778150270847 RLS(ph)VELTSSLFR ddPTM_KYSE-520_SHP099_60min_R1 4 RLSVELTSSLFR 12 1 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y7Z0;A0A2R8Y6G0;A0A2R8YG06 A0A2R8Y804 CTNNB1 Catenin beta-1 1 RLS(1)VELTSSLFR;RLS(0.993)VELT(0.006)S(0.001)SLFR;RLS(1)VELTSSLFR;RLS(0.997)VELT(0.001)S(0.002)SLFR 91.81200000000001 0.0065731999999999995 516235000.0 537980.0 787830.0 649530.0 727430.0 841620.0 779760.0 759760.0 831890.0 1019200.0 619690.0 True False 508137.1769634583 749981.4642430618 691399.7430847449 796564.728490195 907850.7058372451 774893.2286027145 836563.955343046 829004.3677545865 834138.9719411819 614200.0287115242 0.8273154562194246 1.2210703829115435 1.1256914861029412 1.2969141830898927 1.478102675673501 1.2616300755118723 1.3620382875884902 1.349730265388755 1.3580900894632781 1.0 19.228349054191128 -3.7366078717868665 0.9893596520223832 1.3171326232757428 1.5357616305951987e-15 0.5298661346436753 0.12665044801131353 3.4947687394761244 1.3359053105877716 0.03867049673032334 6.26752617111767 0.0001833969581897374 3.7366078717868665 -1.3171326232757412 RLS(ph)VLEEEATEGGTSR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSVLEEEATEGGTSR 16 1 O75808;A0A1B0GVE3;O75808-2 O75808 CAPN15 Calpain-15 1 RLS(1)VLEEEATEGGTSR 59.501999999999995 0.045002999999999994 0.0 45508.0 43474.0 42156.0 40965.0 38238.0 32854.0 31018.0 36174.0 51964.0 40092.0 True False 42983.58052205111 41385.44378419562 44873.44321198485 44858.301283423665 41247.11305554119 32648.945999427484 34153.602146507605 36048.520837075055 42528.64750583947 39736.816071104 1.0817067085882635 1.0414886716173135 1.1292661981697152 1.128885142764217 1.0380074986816936 0.8216296429237393 0.8594951866650328 0.9071819134318864 1.0702580556464274 1.0 15.27818866022839 -6.047923511782359 6.734079838644364 0.9216529776387292 1.0928976704488125 0.5568592724266773 0.0690729138062093 0.17219324904712174 19.49206273691601 0.023662794258012033 0.02401263517408078 8.955224716431817e-07 6.047923511782359 0.17124469281008325 RLS(ph)VYR ddPTM_KYSE-520_SHP099_60min_R1 7 RLSVYR 6 1 P29590-12;P29590-13;P29590-11;H3BT57;P29590-14;P29590-10;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4 P29590-12;P29590-2 PML Protein PML 1 RLS(1)VYR;RLS(1)VYR;RLS(0.999)VY(0.001)R;RLS(1)VYR;RLS(0.995)VY(0.005)R;RLS(1)VYR;RLS(1)VYR 89.698 0.010138 5241140000.0 4142810.0 4086090.0 3639410.0 3360170.0 3713920.0 3772380.0 3622450.0 3647610.0 4182010.0 3827690.0 True False 3913000.070813013 3889788.1030538664 3874012.191861885 3679519.5465280553 4006184.3746857927 3748835.177126694 3988642.5977050937 3634957.292268573 3422662.4038929977 3793779.6444977536 1.0314252374905772 1.025306809449346 1.021148446900572 0.9698822523507886 1.0559876297760458 0.9881531159997012 1.0513638037701942 0.9581361156651451 0.9021774390236397 1.0 21.855204453918933 -7.3915585186322375 5.959019139436659 0.9447209728621133 1.0186788487628566 0.4616182745854025 0.03299085554039356 0.1839075782408898 8.059634680372998 0.017295109211560446 0.008100610929104177 4.059209640991975e-08 7.3915585186322375 0.07395787590074332 RLS(ph)WDK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSWDK 6 1 H0YDJ4;H9KV85;E9PN67;C9J066;Q8N4C6-11;Q8N4C6-4;Q8N4C6-9;Q8N4C6-2;Q8N4C6;Q8N4C6-5;Q8N4C6-10;Q8N4C6-7;Q8N4C6-6 H0YDJ4 NIN Ninein 1 RLS(1)WDK 101.46 0.0076285 331840000.0 191490.0 162480.0 155000.0 175960.0 176370.0 197350.0 184040.0 198360.0 202190.0 189740.0 True False 180867.66797414896 154674.21691254777 164991.5480087685 192683.18549569687 190249.3155919711 196118.26544673435 202644.5592573107 197671.93545757196 165477.39279512115 188059.05121548614 0.9617599727593171 0.8224768545456257 0.8773390429355835 1.0245887355611094 1.0116466841788714 1.0428547000485162 1.0775581284046354 1.051116307244744 0.8799225122406369 1.0 17.52082621888708 -5.260779233045881 24.948442265659043 1.0185932121702765 0.8807204383725857 0.4840509267922126 0.058952404325781756 44.99808190338044 1700556.234988706 0.016268830889555733 0.02616368438744836 5.485557439765376e-06 5.260779233045881 -0.1378727737976908 RLS(ph)YNTASNK ddPTM_KYSE-520_SHP099_60min_R1 3 RLSYNTASNK 10 1 P49207 P49207 RPL34 60S ribosomal protein L34 1 RLS(0.998)YNT(0.002)ASNK;RLS(0.989)YNT(0.011)ASNK;RLS(0.854)YNT(0.141)AS(0.005)NK 235.6 1.7345e-13 2737190000.0 4363210.0 3258870.0 2669920.0 2395330.0 2668950.0 3446650.0 3399960.0 2749700.0 3706630.0 3025660.0 True False 4121174.0434565064 3102308.9935364057 2842027.315223042 2622981.4430177775 2878981.180751784 3425138.178880098 3743661.1372119444 2740161.9324848047 3033599.4285384025 2998855.0063278596 1.3742491833584654 1.0344978290014852 0.9477041434901331 0.8746609747663844 0.9600268017883056 1.1421486439500215 1.2483635018406944 0.9137360514939239 1.0115858959960482 1.0 21.51598033937724 -4.263926753231097 5.151778175732884 1.0140254766335857 1.3898888054548075 0.5185711071041931 0.10409133886839095 0.14079535786600358 12.55376020641478 0.028716194236169338 0.188143114403637 5.4459449472646095e-05 4.263926753231097 0.37586332882122186 RLS(ph)YQGQSR ddPTM_KYSE-520_SHP099_60min_R1 10 RLSYQGQSR 9 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 RLS(0.941)Y(0.059)QGQSR;RLS(0.824)Y(0.175)QGQSR;RLS(1)YQGQSR;RLS(1)YQGQSR;RLS(1)YQGQSR;RLS(1)YQGQSR;RLS(1)YQGQSR;RLS(0.996)YQGQS(0.004)R;RLS(0.992)Y(0.006)QGQS(0.003)R;RLS(1)YQGQSR 158.86 9.933899999999999e-05 21617092000.0 5533060.0 5362597.0 5082149.0 5092099.0 5140287.0 4565924.0 4786786.0 4823308.0 5800753.0 5335871.0 True False 5226130.131918345 5104969.790697795 5409752.456265908 5576050.557964607 5544798.3426677305 4537426.374672487 5270681.043409393 4806577.070316551 4747482.480283283 5288599.33418482 0.9881879495270738 0.96527822739377 1.0229083570952275 1.0543529970065495 1.0484436411786526 0.8579637230869717 0.9966119023879149 0.9088563467546994 0.8976823881507098 1.0 22.33445424984991 -6.243848329584334 24.99807548742891 0.9305507024920651 1.015558506413794 0.44335697933335716 0.046823981378784504 794.0310342462162 1128372.2729236453 0.015532057013474187 0.015500060048087207 5.703634278258947e-07 6.243848329584334 0.08500780392172891 RLS(ph)YSDSDLKR ddPTM_KYSE-520_SHP099_60min_R1 3 RLSYSDSDLKR 11 2 A0A087WTF0;A2A3K4;A2A3K4-2 A0A087WTF0 PTPDC1 Protein tyrosine phosphatase domain-containing protein 1 1 RLS(0.793)YS(0.203)DS(0.004)DLKR;RLS(0.976)YS(0.024)DSDLKR;RLS(0.773)YS(0.226)DS(0.001)DLKR 114.7 0.00020524 2244850000.0 1021480.0 903350.0 823850.0 834070.0 786340.0 875340.0 842280.0 925670.0 924620.0 820860.0 True False 964816.4681301033 859951.710044006 876956.6892066066 913339.7620277106 848220.48433742 869876.6783691135 927425.882260637 922459.0668230026 756732.3157734061 813587.8190194173 1.1858787036572838 1.0569869532713372 1.0778881747068991 1.1226074686424388 1.0425678267402576 1.0691859662028111 1.1399210516431082 1.1338162215048933 0.9301175584037913 1.0 19.6339385538635 RLSASSTGST(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RLSASSTGSTR 11 1 P56945-6;A0A2R8Y6M6;A0A2R8Y5C9;A0A2R8Y8C4;A0A2R8YFS8;A0A2R8Y5E4;A0A2R8Y4C2;A0A2R8YFK2;A0A2R8Y596;P56945;P56945-8;P56945-2;P56945-3;P56945-5;P56945-7;P56945-4 P56945-6 BCAR1 Breast cancer anti-estrogen resistance protein 1 1 RLS(0.269)AS(0.002)S(0.01)T(0.01)GS(0.152)T(0.556)R 100.02 0.0019062999999999999 3930000000.0 365290.0 347170.0 332380.0 285710.0 319070.0 346070.0 313530.0 294460.0 389140.0 311660.0 True False 345026.6355124384 330491.43208720593 353805.7466268029 312863.7924981561 344178.9937400363 343910.0487618512 345224.67215792515 293438.5869874803 318481.9854211061 308898.93486781087 1.1169563781762082 1.0699014945734122 1.1453770365968057 1.012835452579472 1.11421230341025 1.1133416465454078 1.1175974831562931 0.949950141825686 1.0310232554132832 1.0 18.236775370771166 -7.253826208833343 24.98613625539461 0.9928650227153013 1.0971666682553916 0.6081908376343743 0.03858661286657354 365.39746329157913 1199224.6254396718 0.01784554267400442 0.010034234410222977 5.5740876198630764e-08 7.253826208833343 0.10430164554009025 RLSDCES(ph)TDVK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSDCESTDVK 11 1 Q7Z333-3;Q7Z333;Q7Z333-4 Q7Z333-3 SETX Probable helicase senataxin 1 RLS(0.161)DCES(0.419)T(0.419)DVK;RLS(0.083)DCES(0.684)T(0.233)DVK 157.22 3.0089e-05 985870000.0 752130.0 797500.0 712000.0 694530.0 854380.0 964490.0 1020760.0 1183060.0 1233500.0 1117580.0 True False 710407.8495660169 759186.9029280958 757896.6592402795 760537.9223819411 921614.8452427753 958470.2601505992 1123948.3824575779 1178956.2409882792 1009527.4940045611 1107679.110664083 0.6413480607575136 0.6853852308119661 0.6842204136050741 0.686604915683549 0.832023314667587 0.8652959606469159 1.0146877120249573 1.0643481759635818 0.9113898459268792 1.0 20.079108569390275 -6.1644692668773065 1.2351600235479079 1.0047486427228787 0.6654098556923645 0.9118490673257599 0.044375906783160876 0.11862296691907684 0.3726845216092835 0.020880286261189016 0.020502281400707714 6.847479379959857e-07 6.1644692668773065 -0.3393387870305141 RLSELLR ddPTM_KYSE-520_SHP099_60min_R1 3 RLSELLR 7 1 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 0 ;; 152.63 0.0030951999999999998 2905190000.0 1569150.0 1534670.0 1229964.0 954687.0 1504089.0 1497990.0 1190377.0 1209184.0 1193362.0 1239351.0 False True 1482106.1214770274 1460942.1496133686 1309249.4474519817 1045420.1654428876 1622452.2472042446 1488640.4887588238 1310711.9241199705 1204989.6229296676 976677.5430079201 1228371.3143404871 1.206561976964409 1.1893326818672485 1.065841763127559 0.8510620145865047 1.3208158056632409 1.2118815144735575 1.06703234503949 0.9809652902686243 0.7950996018922003 1.0 20.22831529646898 -7.291324996838243 2.6839482086998516 0.8985897784592759 1.133765333372365 0.37191889391616484 0.12587602463641823 0.32370271064156275 4.5493054680517995 0.08574545113961923 0.03701138022217755 5.112990704369453e-08 7.291324996838243 0.23517555491308906 RLSES(ph)QLSFR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSESQLSFR 10 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 RLS(0.423)ES(0.546)QLS(0.031)FR;RLS(0.294)ES(0.469)QLS(0.237)FR 181.46 1.0535e-05 2776700000.0 1024600.0 1002530.0 1090460.0 1032340.0 1000980.0 955640.0 1103450.0 1213590.0 1440490.0 1104840.0 True False 967763.3955105377 954366.9539717904 1160752.7963976883 1130453.2832156615 1079751.4312028764 949675.4962833408 1214997.4946342078 1209380.339544035 1178933.327797834 1095051.9771525129 0.8837602375980669 0.8715266251136784 1.059997900205631 1.0323284253184069 0.9860275619158985 0.8672423922312824 1.109534086038173 1.1044045075274076 1.0766003371487805 1.0 20.062567918968423 -6.780261506772153 24.99918973645073 1.0813351410346308 0.9569331653198208 0.4360972239493486 0.06768418456655412 253.428950058026 336596.38429003477 0.030325633590754155 0.020484092656395177 1.658587901931187e-07 6.780261506772153 -0.12440197571481004 RLSES(ph)SALK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSESSALK 9 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RLS(0.118)ES(0.843)S(0.039)ALK;RLS(0.328)ES(0.646)S(0.026)ALK 175.22 5.7586e-05 11364200000.0 8562200.0 8186800.0 7118800.0 8221000.0 9197200.0 9676300.0 11811600.0 12327400.0 11461600.0 10609800.0 True False 8087237.69767747 7793493.839362663 7577689.238482722 9002321.36826623 9920967.315090302 9615906.622458769 13005631.798107214 12284639.126636803 9380462.363423323 10515805.426299488 0.7690554712482321 0.7411219134838246 0.7205999855732697 0.8560753079124009 0.9434338990600257 0.914424167492666 1.236769916413706 1.168207153768132 0.8920346072554053 1.0 23.326056017374675 -5.919528564963807 1.2613210505303585 1.0761101229210408 0.7420903687407997 0.6440006487350847 0.09770727567562966 0.2722597787551311 0.9085617105390855 0.04288855004373961 0.05266051584598246 1.203570224450648e-06 5.919528564963807 -0.3340197541802411 RLSESQLS(ph)FR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSESQLSFR 10 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 RLS(0.264)ES(0.319)QLS(0.417)FR;RLS(0.043)ES(0.138)QLS(0.82)FR 189.43 3.5842000000000003e-06 7408000000.0 2249110.0 2022970.0 2197940.0 1932410.0 2187410.0 2129950.0 2346460.0 2490770.0 2795100.0 2418430.0 True False 2124347.384810373 1925783.484660125 2339622.729228342 2116065.6653997507 2359546.722339594 2116656.191985165 2583663.0760427574 2482130.100220091 2287580.298737045 2397004.5917100697 0.8862508616618137 0.8034125138184377 0.9760610126988575 0.8827958330651792 0.9843730506399436 0.8830421932880408 1.0778715589357808 1.0355132855416398 0.954349568894668 1.0 21.192801241945347 -5.59084070030473 0.607103821965527 1.0140940092038542 0.8414780741610126 0.43529453038093124 0.059441227719762124 0.9734945651108856 0.7027271338829788 0.03947542103291696 0.0963429821542908 2.5654248646304454e-06 5.59084070030473 -0.17261593504284156 RLSGSS(ph)LCSGSWVSADGFLR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSGSSLCSGSWVSADGFLR 20 1 O75400-3;O75400;F5H578;H0YG38 O75400-3 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 RLS(0.068)GS(0.396)S(0.496)LCS(0.032)GS(0.009)WVS(0.001)ADGFLR 57.922 0.034907 40708000.0 199120.0 207470.0 204340.0 167530.0 231730.0 209400.0 147020.0 194680.0 282050.0 184630.0 True False 188074.4166641208 197502.8297811809 217512.08335556008 183452.00083026866 249965.83263665898 208093.05692701408 161882.21637692786 194004.70051865335 230836.8299018941 182994.32183996623 1.0277609423782956 1.0792839241968544 1.18862750039742 1.0025010556923328 1.3659758954447847 1.1371558135503101 0.884629723749016 1.0601678706092095 1.2614425823756843 1.0 17.481439358025835 -6.595282929700319 24.99999997533925 1.050048048885089 1.13831747953807 0.08924827928409096 0.12773855530714173 111.82353307941497 38607.83275752736 0.04963828186830428 0.03844964866918168 2.539317877890468e-07 6.595282929700319 0.08826943065298098 RLSLES(ph)EGAGEGAAASPELSALEEAFR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSLESEGAGEGAAASPELSALEEAFR 27 1 O94811 O94811 TPPP Tubulin polymerization-promoting protein 1 RLS(0.436)LES(0.564)EGAGEGAAASPELSALEEAFR 81.844 0.00017102 0.0 23114.0 22944.0 16359.0 16073.0 22461.0 22220.0 21961.0 22446.0 26387.0 24937.0 True False 21831.82034338334 21841.735800353865 17413.52731532545 17600.57308747634 24228.55291439172 22081.316737909492 24181.0321987057 22368.14006493579 21595.785962138893 24716.077580692418 0.8833044107467042 0.8837055851214872 0.7045425091612619 0.7121102865134825 0.9802749985425867 0.8933989086989622 0.9783523344171454 0.9050036354639549 0.8737545790440867 1.0 14.593162186550346 -5.770930515099574 24.997274215740433 0.9334554185149047 0.7956597418417817 0.5174911099605692 0.0673281252233395 179.09425354836108 471688.0583505026 0.022200429210717857 0.025497511123014287 1.694608907534641e-06 5.770930515099574 -0.13779567667312298 RLSLGQGDS(ph)TEAATEER ddPTM_KYSE-520_SHP099_60min_R1 1 RLSLGQGDSTEAATEER 17 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RLS(0.442)LGQGDS(0.556)T(0.001)EAATEER 233.29 4.4928999999999996e-20 1432700000.0 866780.0 778740.0 756670.0 628580.0 678550.0 777510.0 683630.0 732410.0 843330.0 775090.0 True False 818697.985516909 741328.1614874295 805446.1589148054 688320.0542105321 731948.0245786251 772657.2716873086 752737.9919858475 729869.4406557784 690202.530619267 768223.3056108946 1.0657031354521025 0.964990460550949 1.0484531685410285 0.8959895504122685 0.9527802908772428 1.0057717151302616 0.9798426922068797 0.9500745881113083 0.898439979076676 1.0 19.551166206047586 -1.000000000005253 0.747822775254959 0.9588113869015101 18.65571884542479 0.3225454420155852 0.04395761954067391 466.4147076229263 2.025388356427063 0.016382252116706277 13900.813731288092 0.09999999999879047 1.000000000005253 17.69690745852328 RLSLS(ph)QSITDDDLEAIANDSEEEIIKPR ddPTM_KYSE-520_SHP099_60min_R1 3 RLSLSQSITDDDLEAIANDSEEEIIKPR 28 2 P01583 P01583 IL1A Interleukin-1 alpha 1 RLS(0.28)LS(0.577)QS(0.135)IT(0.008)DDDLEAIANDSEEEIIKPR;RLS(0.391)LS(0.609)QSITDDDLEAIANDSEEEIIKPR;RLS(0.388)LS(0.611)QS(0.001)ITDDDLEAIANDSEEEIIKPR 227.37 4.7846e-23 1046500000.0 212776.0 226524.0 180143.0 197282.0 209141.0 247708.0 211926.0 258136.0 338084.0 252569.0 True False 200972.89112155998 215641.44702054397 191755.3060189909 216031.62196500367 225599.2068504873 246161.96248938263 233349.5482784441 257240.5864653951 276696.46800408425 250331.43515570866 0.8028272238225008 0.8614237636052893 0.766005699203207 0.8629823970394682 0.9012020672120636 0.9833441906178 0.932162387569497 1.0276000147779638 1.105320503723299 1.0 17.933479942033784 -6.30708616275304 0.797967492433051 1.0466343935676785 0.8071060390700359 0.8224285979415823 0.04230268781123648 0.2594045895314941 0.35700208712247233 0.02951509679444567 0.02698031767158447 4.930759694222376e-07 6.30708616275304 -0.23952835449764265 RLSLSQS(ph)ITDDDLEAIANDSEEEIIKPR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSLSQSITDDDLEAIANDSEEEIIKPR 28 2 P01583 P01583 IL1A Interleukin-1 alpha 1 RLS(0.226)LS(0.329)QS(0.373)IT(0.072)DDDLEAIANDSEEEIIKPR 163.55 3.7382e-10 313990000.0 46717.0 64235.0 59787.0 39774.0 44523.0 68617.0 30207.0 75054.0 65716.0 61924.0 True False 44125.514881969335 61149.054181299296 63640.96568258226 43554.109001510835 48026.706798782885 68188.73585081617 33260.61835191034 74793.65519173536 53783.630965548124 61375.40153614302 0.718944622398674 0.9963120835191533 1.0369132272821886 0.7096346078626059 0.7825074149698346 1.1110108307912394 0.5419209898337477 1.218625920478753 0.8763059730676593 1.0 15.905372937547979 -7.295788342872836 24.99988875765873 1.0355993471074232 0.85877323582744 0.1851249958746659 0.17956095007060982 1151.3374062587961 837961.4952809307 0.09374915839633673 0.04503890271773631 5.06071240055915e-08 7.295788342872836 -0.17682611127998316 RLSLSQSIT(ph)DDDLEAIANDS(ph)EEEIIKPR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSLSQSITDDDLEAIANDSEEEIIKPR 28 2 P01583 P01583 IL1A Interleukin-1 alpha 2 RLS(0.209)LS(0.11)QS(0.073)IT(0.608)DDDLEAIANDS(1)EEEIIKPR;RLS(0.179)LS(0.219)QS(0.27)IT(0.333)DDDLEAIANDS(1)EEEIIKPR 184.86 8.8354e-15 1655776000.0 963784.0 1013838.8 894150.2 918916.4 913957.5 1081009.0 984342.0 1100539.5 1296973.0 1061105.5 True False 910320.9802642287 965132.4622449352 951788.5525829025 1006249.9383737106 985880.7555431711 1074262.0218510716 1083848.8956121486 1096721.9853423496 1061475.3972286794 1051704.9307975865 0.8655669034221074 0.9176836905319091 0.9049958070093768 0.9567797096953763 0.9374119362505071 1.0214481176163912 1.030563672255663 1.0428038827493404 1.0092901213496102 1.0 20.00429856427139 -5.823339173932741 0.9470114770947603 1.0283677446209862 0.8898870136632939 0.8596730809470375 0.021566963549890694 0.19134796034686058 0.3716164421557685 0.010479874483580023 0.015467544044022346 1.5019685053075684e-06 5.823339173932741 -0.1384807309576923 RLSLSQSITDDDLEAIANDS(ph)EEEIIKPR ddPTM_KYSE-520_SHP099_60min_R1 4 RLSLSQSITDDDLEAIANDSEEEIIKPR 28 2 P01583 P01583 IL1A Interleukin-1 alpha 1 RLSLSQSITDDDLEAIANDS(1)EEEIIKPR;RLSLSQSITDDDLEAIANDS(1)EEEIIKPR;RLSLSQSITDDDLEAIANDS(1)EEEIIKPR;RLSLSQSITDDDLEAIANDS(1)EEEIIKPR 127.28 0.00010047 1300120000.0 658623.0 664232.0 644136.0 614325.0 547639.0 554937.0 449183.0 470977.0 650897.0 510300.0 True False 622087.8692576002 632321.2976874416 685658.0372140399 672710.2632964536 590735.0736603255 551473.4323395711 494590.80124362395 469343.2907138582 532710.5125781005 505779.1390073923 1.2299595243854213 1.2501925226263628 1.355647128032338 1.3300474681827903 1.1679704204876105 1.09034436141802 0.9778790050816928 0.9279609507718318 1.0532473000439717 1.0 18.94814800833153 -6.241419795666989 1.7880413055072517 0.9856097744729717 1.291756342841595 0.8823031854040072 0.04905376033293485 0.11557406699372237 0.7291017755756526 0.02138767013684343 0.019818171416887232 5.735617806076369e-07 6.241419795666989 0.3061465683686233 RLSNLPT(ph)VDPIAVCHELYNTIR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSNLPTVDPIAVCHELYNTIR 22 1 Q86U86-8;Q86U86;E7EVG2;Q86U86-6;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;C9JCJ2;C9J053;C9JQF1;C9JPI5 Q86U86-8 PBRM1 Protein polybromo-1 1 RLS(0.307)NLPT(0.693)VDPIAVCHELYNTIR;RLS(0.381)NLPT(0.619)VDPIAVCHELYNTIR 103.73 0.0001258 155917000.0 141734.0 175519.0 196911.0 195891.0 211258.0 201648.0 163782.0 216203.0 277160.0 160943.0 True False 133871.73248027582 167086.80378061003 209604.1981287397 214508.42174322307 227882.80270640488 200389.44003447212 180338.6829182832 215453.0422551598 226834.73063502525 159517.1702317592 0.8392308632718117 1.0474534091712702 1.3139914519810632 1.344735625836192 1.4285785183834359 1.256224892551256 1.1305283478654544 1.350657374012669 1.4220082409026047 1.0 17.283352196702694 -4.540998729949309 2.695292124615751 1.2953227826871334 0.8444662894209569 0.5592108363567873 0.1255858686015275 0.20752172706840397 2.7586226858106837 0.03283021789371084 0.15685824525887757 2.8774068294112877e-05 4.540998729949309 -0.4508564932661765 RLSPIS(ph)GSR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSPISGSR 9 1 E9PQ01 E9PQ01 PCF11 1 RLS(0.382)PIS(0.552)GS(0.066)R 116.75 0.00087171 1379000000.0 1593500.0 1505800.0 1540000.0 1360700.0 1425100.0 1388000.0 1436600.0 1451900.0 1710300.0 1445100.0 True False 1505105.378436504 1433459.1077481187 1639270.8640871223 1490020.518890626 1537247.262290174 1379336.9771475417 1581825.54786488 1446863.6977760086 1399752.6331544383 1432297.538270786 1.0508329018379932 1.0008109833650451 1.1445044205453396 1.0403009703483321 1.0732736887519152 0.9630240507239972 1.10439730963625 1.0101697860367815 0.9772778321216421 1.0 20.44989979125512 -7.5084444492642035 22.753071479113093 0.9903338267739841 1.052425514829271 0.24517282520512418 0.04762809593923425 281.0243036968022 442996.11843875377 0.026844391987302815 0.012068781155643455 3.101384062116345e-08 7.5084444492642035 0.062091688055286864 RLSPISGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 RLSPISGSR 9 1 E9PQ01 E9PQ01 PCF11 1 RLS(0.008)PIS(0.021)GS(0.971)R;RLS(0.357)PIS(0.185)GS(0.458)R 102.46 0.0022326 4112100000.0 4767600.0 4619600.0 4623300.0 3852800.0 4478200.0 4327800.0 4145200.0 4432000.0 5151300.0 4419700.0 True False 4503131.724025025 4397667.481839036 4921325.3155415505 4218968.953613437 4830608.862527442 4300788.594884097 4564237.2692534495 4416626.426436572 4215953.773705463 4380544.896474567 1.0279843787582488 1.0039087797908997 1.1234504911711325 0.9631151040156749 1.1027415485263223 0.9817930637682408 1.0419336811104747 1.0082367675288624 0.9624267924062219 1.0 22.062678907312012 -7.506566381454426 4.113310658718481 0.9813028628121578 1.0347487009764351 0.17358075903447934 0.04712867490361316 0.34536816035098367 13.544719539911386 0.02954363270395394 0.011583048042458527 3.11482476190016e-08 7.506566381454426 0.05344583816427728 RLSPS(ph)AS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 6 RLSPSASPPR 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RLS(0.224)PS(0.798)AS(0.977)PPR;RLS(0.241)PS(0.783)AS(0.977)PPR;RLS(0.334)PS(0.693)AS(0.973)PPR;RLS(0.323)PS(0.691)AS(0.987)PPR;RLS(0.381)PS(0.723)AS(0.896)PPR;RLS(0.321)PS(0.704)AS(0.975)PPR 115.24 0.00067182 21237700000.0 7209060.0 6356220.0 6439710.0 5826230.0 6411030.0 6359570.0 5795740.0 5989610.0 7457000.0 6083060.0 True False 6809159.070895182 6050857.650319266 6854824.010500308 6379953.147480082 6915541.587229092 6319877.564667282 6381629.960171511 5968833.440895489 6102996.775672485 6029168.820949072 1.1293694492739927 1.003597316647501 1.136943451754477 1.0581812082143343 1.1470140897697558 1.0482170515292435 1.0584593249400764 0.9899927532558153 1.0122451297875237 1.0 22.52352769573686 -6.965071986161537 1.7920847886938525 0.9999426658787547 1.0891544519946883 0.46690919347106064 0.04155056532352497 0.32140124089038785 2.0444004743662214 0.023902461067408818 0.012423720568251152 1.0837472634043509e-07 6.965071986161537 0.08921178611593361 RLSQS(ph)DEDVIR ddPTM_KYSE-520_SHP099_60min_R1 2 RLSQSDEDVIR 11 1 H0Y917;A0A499FIZ0;Q9H7D7-3;Q9H7D7-4;Q9H7D7-2;Q9H7D7 H0Y917 WDR26 WD repeat-containing protein 26 1 RLS(0.273)QS(0.727)DEDVIR;RLS(0.248)QS(0.752)DEDVIR 84.71799999999999 0.004249 1410280000.0 654900.0 647260.0 681510.0 678330.0 595190.0 690850.0 669900.0 649950.0 746520.0 747930.0 True False 618571.391489217 616164.6580429336 725441.2250545549 742798.2792526498 642028.0668321443 686538.1488922038 737620.0295939607 647695.4751494708 610970.7862377658 741303.922080735 0.8344369604210037 0.831190338658194 0.9786016280857441 1.0020158495421423 0.8660794145403448 0.9261223749702937 0.9950305234101094 0.8737246031715056 0.8241839386507729 1.0 19.49970561883621 -4.743589087930304 24.97176945089455 0.9307231315393936 0.8328135507366484 0.31410158429643853 0.05925741401077705 304.6819732546029 426229.8286283572 0.015575050706854858 0.0410206222042196 1.8047244914387065e-05 4.743589087930304 -0.09790958080274514 RLSS(ph)AS(ph)TGKPPLSVEDDFEK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A 2 RLS(0.351)S(0.651)AS(0.972)T(0.027)GKPPLSVEDDFEK 141.48 1.2766e-06 984270000.0 362440.0 409120.0 381210.0 471310.0 446300.0 547720.0 608880.0 777760.0 799210.0 625330.0 True False 342334.7306937725 389465.2610983607 405783.40655756573 516103.1606954819 481421.2709003616 544301.4763135813 670431.5324961493 775062.1320905491 654093.6104445767 619790.0626993778 0.5523398184262566 0.6283825516693811 0.6547110561764306 0.8327064142456443 0.776748934637033 0.8782029739924835 1.0817074568382272 1.2505236510487332 1.0553470437970502 1.0 19.241420098336 -6.120132413237002 0.7978392899048795 1.134268182516192 0.5961093977429179 0.8452652593081863 0.0840593325314496 0.23766022445373894 0.3341327587616389 0.055824059842679886 0.06223663450820702 7.583463254845013e-07 6.120132413237002 -0.5381587847732741 RLSS(ph)AST(ph)GKPPLSVEDDFEK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A 2 RLS(0.406)S(0.488)AS(0.38)T(0.711)GKPPLS(0.016)VEDDFEK 101.85 0.0019798 4399500000.0 1034900.0 1347300.0 1354500.0 1679000.0 1470700.0 1675400.0 2056700.0 2556000.0 2838500.0 2111100.0 True False 977492.0339779968 1282573.6856614705 1441813.2372766274 1838571.6551902425 1586435.7228616665 1664943.2071419265 2264611.307457675 2547133.8325748863 2323099.9527620133 2092397.2964109483 0.46716368619605436 0.6129685255574772 0.6890724050111057 0.8786914695138975 0.7581904859000016 0.7957108384711516 1.082304642307712 1.2173280078998092 1.1102575771564918 1.0 20.996725380345936 -5.71111332828038 0.509382570698362 1.1450435331624371 0.4537479853086139 0.80730899662851 0.09997697761248463 0.586557247468731 0.29258422469067596 0.0887080751946399 0.2053227084484415 1.9448525100103225e-06 5.71111332828038 -0.6912955478538232 down RLSS(ph)EVEALRR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSEVEALRR 11 2 P15924 P15924 DSP Desmoplakin 1 RLS(0.356)S(0.644)EVEALRR 99.069 0.0013223 418440000.0 211930.0 202710.0 159810.0 167440.0 190630.0 164630.0 163350.0 165770.0 218070.0 179450.0 True False 200173.82042801887 192971.50732608692 170111.60830504083 183353.44725732817 205631.49646366984 163602.4831036024 179863.01214236935 165194.98256100886 178473.98509734432 177860.21260998753 1.1254558705996867 1.084961636412948 0.9564343020215664 1.0308851235851506 1.156141069698254 0.919837442578293 1.0112605259096006 0.9287911002515721 1.0034508700869635 1.0 17.440384289763067 -6.278654510767851 24.998459275325374 0.9706294677244942 1.0629952894304233 0.41570134460410146 0.05776446253043148 921.2833401851285 1337811.829770442 0.020853703784278452 0.018436792394140714 5.264358892705701e-07 6.278654510767851 0.09236582170592911 RLSS(ph)FVTK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSFVTK 8 1 F8VPD4;P27708;H7C3Z5 F8VPD4 CAD CAD protein;Glutamine-dependent carbamoyl-phosphate synthase;Aspartate carbamoyltransferase;Dihydroorotase 1 RLS(0.276)S(0.724)FVTK 116.84 0.00064903 2329900000.0 1824800.0 1635600.0 1620700.0 1546200.0 1336400.0 1554600.0 1580000.0 1358500.0 1478100.0 1398700.0 True False 1723574.706351387 1557023.3209143477 1725172.9152116848 1693150.3831180204 1441567.0769241406 1544897.1647504116 1739721.8193140102 1353787.680576283 1209714.29986878 1386308.6061721328 1.2432835652016268 1.123143370806585 1.2444364173538691 1.2213372805880052 1.0398601512722243 1.1143962880070208 1.2549311254134965 0.9765413520113344 0.8726154439804251 1.0 20.402817020908046 -7.3798238211061875 5.377833458931496 0.9336525864698436 1.1713295837687172 0.6797660732297031 0.07171531660000949 0.13458917944952853 5.36319289000745 0.041528501221613535 0.019269345311253235 4.170385278844036e-08 7.3798238211061875 0.2376769972988736 RLSS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 3 RLSSLR 6 1 A2A3R5;P62753;Q9Y253-2;Q9Y253 A2A3R5 RPS6;POLH 40S ribosomal protein S6;DNA polymerase eta 1 RLS(0.015)S(0.985)LR;RLS(0.104)S(0.896)LR;RLS(0.014)S(0.986)LR 93.93799999999999 0.014968 68339200000.0 81455400.0 61065900.0 54919300.0 54325500.0 54264000.0 65929600.0 57036700.0 61117000.0 66546500.0 51777200.0 True False 76936906.58468579 58132202.502215445 58459485.95198685 59488579.186442785 58534268.08007445 65518108.91105666 62802526.26054901 60904999.39181508 54463333.10074951 51318494.29005207 1.4992042858825607 1.1327729565417937 1.1391504517177355 1.1592035193046273 1.140607667661464 1.2766958543395366 1.2237795969926397 1.186804099270335 1.061280808297352 1.0 25.61297550587564 -1.0000003546499685 0.023024212819274935 1.8119662395189201e-09 2.7562437931072368 0.3844155541904949 0.10094864573750609 2989.805117475265 5.30998901139113 225.24338521042276 444.70412714963254 0.09999991833886027 1.0000003546499685 2.7562437912952706 RLSS(ph)LRAS(ph)TSK ddPTM_KYSE-520_SHP099_60min_R1 4 RLSSLRASTSK 11 2 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 2 RLS(0.469)S(0.549)LRAS(0.502)T(0.426)S(0.054)K;RLS(0.494)S(0.578)LRAS(0.476)T(0.396)S(0.056)K;RLS(0.454)S(0.549)LRAS(0.575)T(0.364)S(0.058)K;RLS(0.46)S(0.554)LRAS(0.523)T(0.293)S(0.169)K 70.783 0.018179 17177170000.0 13906210.0 11388640.0 11144200.0 10019330.0 9951880.0 9582000.0 9014810.0 9817810.0 13294310.0 8156740.0 True False 13134804.809957642 10841512.639702862 11862572.963350447 10971564.110778596 10735036.337548481 9522195.183737583 9926114.97086717 9783754.30860408 10880398.426282747 8084477.629447703 1.624694310751028 1.3410282193388303 1.4673270812378816 1.357114783868618 1.3278577577413437 1.177836790475243 1.2277991758813587 1.2101900403517432 1.3458381512060722 1.0 22.946723127716737 -1.0000000000000004 0.12987393574270656 0.9753835479461469 2.852189697191172 0.7288644363484438 0.08376989340544702 45.17879036128444 0.3980124880179137 0.4487779646452212 15.525399004082798 0.0999999999999999 1.0000000000000004 1.876806149245025 RLSS(ph)LRAS(ph)TSKS(ph)ES(ph)SQK ddPTM_KYSE-520_SHP099_60min_R1 2 RLSSLRASTSKSESSQK 17 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 4 RLS(0.467)S(0.519)LRAS(0.725)T(0.174)S(0.194)KS(0.921)ES(0.88)S(0.12)QK;RLS(0.468)S(0.53)LRAS(0.712)T(0.203)S(0.203)KS(0.881)ES(0.532)S(0.47)QK 71.05199999999999 0.0074096000000000006 1766410000.0 1942630.0 1541670.0 1451200.0 1391350.0 1190270.0 1547420.0 1175140.0 1281450.0 1797350.0 1372040.0 True False 1834868.441363104 1467605.8591061514 1544746.6740020958 1523583.4856753703 1283937.4772901027 1537761.9777936947 1293934.6194611809 1277004.9490426786 1470996.5475063624 1359884.7930309663 1.349282270649909 1.0792133764766145 1.1359393692160509 1.1203768830148808 0.9441516545150938 1.1308031280843052 0.9515031170965644 0.9390537754278715 1.0817067409274765 1.0 20.375053003473948 -1.0000000000040081 0.5441831547809006 1.0062965673361661 14.503998773647375 0.646699153923767 0.0704866236594483 81.5020498307563 0.7617304711035225 0.0344726926063375 1282.6382223151325 0.09999999999907709 1.0000000000040081 13.497702206311208 RLSS(ph)LRAST(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSLRASTSK 11 2 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 2 RLS(0.454)S(0.549)LRAS(0.475)T(0.511)S(0.011)K 84.035 0.013637 4721200000.0 4550000.0 3931600.0 3381200.0 3267200.0 3163300.0 3014700.0 2999000.0 3135900.0 4263200.0 2720100.0 True False 4297602.429799872 3742720.0345480824 3599157.562111279 3577713.705680503 3412233.713285042 2995884.139053819 3302168.187419448 3125022.2948245644 3489110.346526339 2696002.030205775 1.5940649827596212 1.3882482255632485 1.3349980904267233 1.327044143734354 1.2656643708182223 1.1112321524569309 1.2248389097716692 1.1591320257967477 1.2941794210221826 1.0 21.362390152255927 -1.0000000000000002 0.27740816331771373 1.114961184201584 4.4855990831154235 0.7808183093600879 0.07245599175329909 23.837250376447994 0.3353281099109642 0.07994862833298338 38.82782830439184 0.09999999999999995 1.0000000000000002 3.3706378989138397 RLSS(ph)LRAST(ph)SKS(ph)ESS(ph)QK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSLRASTSKSESSQK 17 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 4 RLS(0.186)S(0.81)LRAS(0.392)T(0.474)S(0.474)KS(0.661)ES(0.27)S(0.732)QK 60.8 0.014269 1378800000.0 961270.0 795530.0 661190.0 672020.0 637100.0 759080.0 641460.0 769830.0 908140.0 695280.0 True False 907946.4368557619 757311.5446851264 703811.365341405 735888.5787498194 687236.1453968631 754342.3001535704 706305.0368463075 767159.6394096721 743244.6683464146 689120.3601196553 1.3175440596445458 1.098953954217273 1.0213184895875067 1.067866546015334 0.9972657683159079 1.0946452083096054 1.0249371194368257 1.113244773781559 1.078541153852081 1.0 19.394396457051187 -4.275177636458523 3.220176439055996 1.0533219623998882 1.3513481645605612 0.8194798444742019 0.037513352598123995 0.12241587209074296 2.0507607803132224 0.009228756156901424 0.0898972118924066 5.30667344652771e-05 4.275177636458523 0.298026202160673 RLSS(ph)SLNPSK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSSLNPSK 10 1 A0A590UJ01;Q13535-2;Q13535-3;Q13535 A0A590UJ01 ATR Serine/threonine-protein kinase ATR 1 RLS(0.011)S(0.974)S(0.011)LNPS(0.004)K 175.34 3.0987e-05 1062700000.0 1432800.0 1441400.0 1387200.0 1480900.0 1608200.0 1914200.0 1953900.0 2000000.0 2295900.0 1759800.0 True False 1353319.7277840115 1372152.9804144902 1476621.131598476 1621644.2907511776 1734756.1905936836 1902252.7677635632 2151419.2802263573 1993062.466803509 1879022.4349291192 1744209.541103683 0.7758928591387431 0.7866904452008865 0.8465847117566591 0.9297302030150862 0.9945801520475472 1.0906102294107825 1.233463772285642 1.142673755552535 1.077291684656266 1.0 20.7341419384251 -5.674704985350988 1.1755810036650123 1.127984824654625 0.7823944681750542 0.8395381491709512 0.05829372631021618 0.17481937034711345 0.5067343752184714 0.024215180624533688 0.039141996664468125 2.11492521292964e-06 5.674704985350988 -0.3455903564795707 RLSSAS(ph)TGKPPLSVEDDFEK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSASTGKPPLSVEDDFEK 20 2 O75152;A0A1B0GTU1;A0A494C0C4 O75152;A0A1B0GTU1 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 RLS(0.131)S(0.263)AS(0.303)T(0.303)GKPPLSVEDDFEK 104.53 0.00038287 1219400000.0 368520.0 387720.0 358190.0 438080.0 370400.0 474720.0 544250.0 580650.0 742840.0 496520.0 True False 348077.46097359294 369093.34922041534 381279.5005242634 479714.9914864447 399548.37271228794 471757.0963915566 599268.1013681329 578635.8606747291 607958.9814725149 492121.2190867142 0.7073002493563684 0.75000494777564 0.7747674469957778 0.9747903014153847 0.8118901547341846 0.9586197020056366 1.2177245729827773 1.175799453940576 1.23538461235379 1.0 18.90865419779613 -6.540268557496046 2.70074085748355 1.1728701446646912 0.8078464284697574 0.7724625208737504 0.08985605058925465 0.130327397814034 1.9273647982105206 0.038385434570333735 0.029867438767913278 2.882248637155295e-07 6.540268557496046 -0.3650237161949338 RLSSDCS(ph)VTQER ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSDCSVTQER 12 1 E7EX48;P51957-3;P51957;P51957-2 E7EX48 NEK4 Serine/threonine-protein kinase Nek4 1 RLS(0.277)S(0.201)DCS(0.521)VT(0.001)QER 162.79 3.5853e-06 274270000.0 507440.0 499350.0 525980.0 428350.0 443600.0 491000.0 404810.0 492740.0 549910.0 504740.0 True False 479291.2916434384 475360.4764603686 559885.5123977552 469060.25521187665 478508.79626126064 487935.4868727974 445732.1453648766 491030.7999463806 450060.2061029973 500268.39628177835 0.9580682993484072 0.9502108867829016 1.1191702625212352 0.9376172044809251 0.9565041482087517 0.9753474145066034 0.890986016062098 0.981534719354539 0.8996374934895925 1.0 18.93234278951437 RLSSS(ph)LNPSKR ddPTM_KYSE-520_SHP099_60min_R1 1 RLSSSLNPSKR 11 2 A0A590UJ01;Q13535-2;Q13535-3;Q13535 A0A590UJ01 ATR Serine/threonine-protein kinase ATR 1 RLS(0.101)S(0.101)S(0.798)LNPSKR 84.75299999999999 0.0030021 1270100000.0 644090.0 670760.0 616420.0 713220.0 628460.0 768300.0 719250.0 671780.0 922680.0 717130.0 True False 608361.0437384167 638535.6827687145 656155.4195068725 781004.2143625887 677916.2265517391 763504.7547135856 791958.8092035463 669449.7519746312 755144.5708699867 710776.7861186976 0.8559101192098053 0.8983631644127457 0.923152573805775 1.0988037730204703 0.9537681024356487 1.0741835828415514 1.1142159179510562 0.9418565223975043 1.0624215444535914 1.0 19.439037038332486 -5.082627607892609 4.686846478917266 1.0339092877268998 0.8834295344006012 0.5912906300068075 0.05504131976381562 0.1480881280562245 5.728020938919373 0.014806903489322445 0.02710127996280751 8.26746551564286e-06 5.082627607892609 -0.1504797533262986 RLSYNT(ph)ASNK ddPTM_KYSE-520_SHP099_60min_R1 1 RLSYNTASNK 10 1 P49207 P49207 RPL34 60S ribosomal protein L34 1 RLS(0.418)YNT(0.582)ASNK 69.71600000000001 0.043249 650920000.0 776400.0 532310.0 517560.0 558440.0 535470.0 661250.0 648690.0 656870.0 609280.0 572410.0 True False 733331.5442849708 506737.0285864007 550922.7457252792 611513.9696988917 577608.4425924635 657122.8934717666 714265.9158043078 654591.4712846105 498650.11069890443 567338.8927282416 1.2925811251164137 0.8931822497653628 0.9710646542774112 1.0778636499927217 1.0181012618663199 1.158254619759573 1.2589757637970451 1.1537926972303718 0.8789281275975566 1.0 19.113851242769375 -4.228554550475704 23.192603232996667 1.058391939321019 1.2925823011810065 0.28838849991326077 0.11482482418076248 8204.529540796539 5786129.322663781 0.030563998917606316 4.083937230091302 5.90806751384071e-05 4.228554550475704 0.23419036185998743 RLSYQGQS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 RLSYQGQSR 9 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 RLS(0.292)YQGQS(0.708)R;RLS(0.002)YQGQS(0.998)R 136.86 0.00049236 3725130000.0 1823510.0 1841980.0 1598100.0 1633330.0 1816570.0 1463940.0 1465260.0 1580350.0 1993510.0 1704300.0 True False 1722356.2652229385 1753488.5159316529 1701116.0830504075 1788561.1921214303 1959523.7241305627 1454803.0074390287 1613382.7803595252 1574868.1347064623 1631538.836297551 1689201.2279253379 1.0196276421953123 1.0380578032643701 1.0070535439639143 1.0588206795931148 1.1600297772321848 0.8612372424248146 0.9551157989276788 0.9323152911987291 0.9658641074405283 1.0 20.687909770309837 -6.270440275142238 24.99996512683347 0.9394392796184822 1.053038910819238 0.5564181956590575 0.05070879916886971 513.4888347529409 1426209.770951199 0.017910447781000205 0.016026943178370733 5.364876449891566e-07 6.270440275142238 0.11359963120075578 RLT(ph)ADMISHPLGDFR ddPTM_KYSE-520_SHP099_60min_R1 2 RLTADMISHPLGDFR 15 1 Q00587-2;Q00587;B0QYC6;B0QYC7;B0QYC8 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 RLT(1)ADMISHPLGDFR;RLT(0.967)ADMIS(0.033)HPLGDFR 110.56 0.00036062 925820000.0 585780.0 517420.0 435750.0 423780.0 409700.0 453670.0 421190.0 422420.0 537440.0 485230.0 True False 553285.6156765205 492562.3665367461 463839.1422246512 464055.92378589744 441941.0591258751 450838.4772496585 463767.9956182715 420954.72361356905 439854.44375987863 480931.2397032279 1.150446404808182 1.0241845941234666 0.9644604133241087 0.9649111670771401 0.9189277440130261 0.9374281394734537 0.9643124782337962 0.8752908708391057 0.914589046100027 1.0 18.875471116394067 -3.3594993630797285 0.8023540919255726 0.9300362533191787 1.8777757793003782 0.8070994762637516 0.03172446460178387 3.604196568294016 0.6136902796066268 0.011213444804629455 4.269929772624673 0.00043701931998656196 3.3594993630797285 0.9477395259811995 RLT(ph)AEDLFEAR ddPTM_KYSE-520_SHP099_60min_R1 1 RLTAEDLFEAR 11 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 RLT(1)AEDLFEAR 109.38 0.00040988 0.0 68265.0 64964.0 55727.0 50781.0 49871.0 51035.0 49334.0 50411.0 60180.0 50846.0 True False 64478.204367096325 61843.03192704797 59319.251586352555 55607.21097213561 53795.56397282531 50716.47163452795 54321.162173441415 50236.13600701584 49252.829014344905 50395.54399758942 1.279442570759441 1.2271527802141815 1.1770733457940248 1.1034152339896457 1.0674666787087073 1.0063681748718474 1.0778961365322253 0.9968368633825799 0.9773250789137394 1.0 15.621008555005115 -4.847816038103602 0.5462032774003216 0.9956094586566724 1.3797106958551277 0.9471102044237082 0.022948030811642803 0.48864314291416955 0.1731688876088613 0.014812288415777143 0.1108126964760699 1.4196587446399262e-05 4.847816038103602 0.38410123719845535 RLT(ph)LEDLEDSWDR ddPTM_KYSE-520_SHP099_60min_R1 1 RLTLEDLEDSWDR 13 1 Q6P2Q9;I3L3Z8 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 1 RLT(1)LEDLEDSWDR 147.16 1.4249e-05 58331000.0 16965.0 12702.0 16007.0 11286.0 14393.0 10513.0 10861.0 12867.0 16725.0 17855.0 True False 16023.91763111095 12091.776853909307 17038.83683210555 12358.618046740374 15525.647215032275 10447.384467400658 11958.935873145236 12822.367380180374 13688.161602939825 17696.8185909798 0.9054688303850534 0.6832740467867244 0.962819206430153 0.6983525306090697 0.8773128986554574 0.5903538205859084 0.6757675574094879 0.7245577680677605 0.7734814894874258 1.0 14.111202405645692 -4.235567991452669 22.455511981901918 0.7652163131104702 0.9054695539830474 0.08101305730464525 0.1257857852567631 4680.544404088032 4062301.0251049427 0.03002332207297524 1.7644153025027554 5.813424124797959e-05 4.235567991452669 0.14025324087257718 RLT(ph)VNEAVK ddPTM_KYSE-520_SHP099_60min_R1 8 RLTVNEAVK 9 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 RLT(1)VNEAVK;RLT(1)VNEAVK;RLT(1)VNEAVK;RLT(1)VNEAVK;RLT(1)VNEAVK;RLT(1)VNEAVK;RLT(1)VNEAVK;RLT(1)VNEAVK 130.65 0.00072315 6597330000.0 7566500.0 7012520.0 7049730.0 6072420.0 5864750.0 6588820.0 6195020.0 7264850.0 8171380.0 8083630.0 True False 7146771.16155621 6675628.013192881 7504166.87576681 6649540.971060348 6326272.459137121 6547696.730381322 6821273.079168798 7239649.930978741 6687663.375726782 8012015.327168975 0.8920066761881126 0.833202102167183 0.9366141437997458 0.8299461121238202 0.7895981473830371 0.8172346735505976 0.8513804330899948 0.9035991115030545 0.8347042663596415 1.0 22.933733750386118 -9.724010809462781 0.7488603076957897 1.0163273905046164 0.8523334007529226 0.5175706988379859 0.042098372879824986 23.307216729216886 7.971680237834917 1.040518116678446 0.015453527433145667 1.887944358127965e-10 9.724010809462781 -0.16399398975169377 RLTLEDLEDSWDR ddPTM_KYSE-520_SHP099_60min_R1 3 RLTLEDLEDSWDR 13 1 Q6P2Q9;I3L3Z8 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 ;; 210.34 9.334399999999999e-11 626290000.0 439060.0 447200.0 339610.0 217033.0 414870.0 414870.0 271944.0 274005.0 365910.0 337665.0 False True 414704.46655558905 425715.84073911473 361501.80399521196 237659.75106664927 447517.90871259884 412280.6424417871 299434.75343767693 273054.5406082477 299469.96784046094 334673.5507993946 1.2391312835000978 1.2720331192060392 1.0801624542236334 0.7101240910701784 1.3371774006152157 1.2318889301440814 0.8947069546501449 0.8158832389235272 0.8948121748048297 1.0 18.3523950139933 -6.777597345660244 23.64082873258444 0.8860072707765779 1.136865829744303 0.33427084763713577 0.16771144050432327 161.98063641506266 236991.09553983554 0.07462042208852347 0.05052197052456644 1.66879371073964e-07 6.777597345660244 0.25085855896772513 RLVEVDSSR ddPTM_KYSE-520_SHP099_60min_R1 2 RLVEVDSSR 9 1 Q03252 Q03252 LMNB2 Lamin-B2 0 ; 114.86 0.015199 0.0 241750.0 247220.0 208425.0 162436.0 213260.0 263160.0 180100.0 204151.0 205908.0 189781.0 False True 228339.64558332256 235343.18011521487 221860.40899179116 177873.86860183577 230042.3487165834 261517.5208257546 198306.2656066161 203442.84783020164 168520.29771827406 188099.68798738372 1.213928890720105 1.2511619909279164 1.1794831313418863 0.9456361704000603 1.2229810223396695 1.3903134216963464 1.0542615340218797 1.081569299805787 0.8959095016126614 1.0 17.52113793021218 -7.2833477144563465 2.1629369673532746 0.9647156545250125 1.189425752719359 0.407326099971583 0.1126020004877858 0.3607888116145325 3.179944577531033 0.08404195263055261 0.034288766573569954 5.207775876702455e-08 7.2833477144563465 0.2247100981943465 RLYWDDLK ddPTM_KYSE-520_SHP099_60min_R1 1 RLYWDDLK 8 1 P02786;G3V0E5 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form 0 68.37100000000001 0.061011 383730000.0 249820.0 257180.0 185480.0 241860.0 422130.0 368650.0 322470.0 271680.0 341680.0 321870.0 False True 235961.98659617678 244824.68676495014 197436.337578493 264846.30168213934 455349.2294088494 366349.1186062262 355068.4146039175 270737.6054905885 279639.5250518675 319018.48221107054 0.7396498941401723 0.7674310437066403 0.6188868312898066 0.8301910906431761 1.4273443540101198 1.1483633050571678 1.1130026453106734 0.8486580577217523 0.8765621449695539 1.0 18.283280482821475 -5.536032994293176 24.9855450211201 1.07315236316092 0.7162009670091986 0.531597300273992 0.15483468164566844 189.61901337035977 360165.7995110852 0.04978246831534066 0.06430515116110588 2.910495992977595e-06 5.536032994293176 -0.35695139615172156 RMAS(ph)PPAPSPAPPAIS(ph)PIIK ddPTM_KYSE-520_SHP099_60min_R1 1 RMASPPAPSPAPPAISPIIK 20 1 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 2 RMAS(0.997)PPAPS(0.006)PAPPAIS(0.997)PIIK 90.51799999999999 0.0011172 309920000.0 280060.0 346110.0 295600.0 260440.0 312600.0 282350.0 246260.0 264460.0 420200.0 285200.0 True False 264524.51351423113 329482.3560782987 314654.8489767227 285192.13929585856 337199.8415493009 280587.74891758565 271154.3640659929 263542.649985428 343902.2723799885 282673.3498822424 0.9357957289727815 1.1655939840651985 1.113139420846724 1.008910600927415 1.1928957635722415 0.9926218691449846 0.9592498344076364 0.932322237293385 1.216606632791005 1.0 18.108776348390876 RMEDEGGFPVPQENGQPES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 10 RMEDEGGFPVPQENGQPESPR 21 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR;RMEDEGGFPVPQENGQPES(1)PR 219.01 1.7384e-18 11163260000.0 4342140.0 4076460.0 3555130.0 3312230.0 3692590.0 3864100.0 3646150.0 3742840.0 4468480.0 4052370.0 True False 4101272.838358512 3880620.7427087957 3784299.368209116 3627023.3433417347 3983175.825036892 3839982.718584886 4014738.424994797 3729856.961625426 3657116.67321402 4016469.1544961496 1.0211139885805998 0.9661771554661931 0.9421955510284111 0.9030377687032756 0.9917107966777268 0.9560593075354009 0.9995690917980995 0.9286407583760772 0.9105302524532374 1.0 21.93749636633522 -7.3133080435372335 24.99250909536574 0.9396891261112594 0.9653374678590311 0.055265147493010924 0.03753888401971254 957.1835503835243 461206.733780921 0.020585454339430608 0.009888949269206932 4.8606232111105424e-08 7.3133080435372335 0.02564834174777164 RMEDEGGFPVPQENGQPES(ph)PRR ddPTM_KYSE-520_SHP099_60min_R1 1 RMEDEGGFPVPQENGQPESPRR 22 2 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RMEDEGGFPVPQENGQPES(1)PRR 95.794 0.0015168 910100000.0 106440.0 108880.0 97667.0 83462.0 85977.0 77026.0 90882.0 89041.0 117490.0 69649.0 True False 100535.56101712055 103649.24136778801 103962.77109272526 91394.20338623464 92742.90075778718 76545.25216265599 100069.23948284559 88732.13755332562 96156.7776818775 69031.96404610208 1.4563624605839003 1.5014673680523887 1.5060091731316687 1.3239403608044273 1.3434776489315887 1.10883781477717 1.4496073067835022 1.2853775606625801 1.3929312168731065 1.0 16.074976910902905 -13.077310390779926 0.0749229185066763 8.051692206143601e-14 1.7778467704164822 0.5656697184533414 0.10506918350836394 181.49587665444915 1.1580710014457243 34.17283572916353 5.046062484776324 8.369309128113647e-14 13.077310390779926 1.7778467704164016 RMEEEQHHWDDR ddPTM_KYSE-520_SHP099_60min_R1 2 RMEEEQHHWDDR 12 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 0 ; 135.58 4.5768999999999995e-05 241666000.0 77341.0 92785.0 84236.0 94126.0 80853.0 72858.0 80775.0 87223.0 95675.0 46292.0 False True 73050.74055453882 88327.46932687571 89665.98734236538 103071.7067399862 87215.67110935904 72403.26619669718 88940.52528803112 86920.44377100132 78302.83177047934 45881.88889463104 1.5921476276249602 1.9251053401424265 1.9542784637373074 2.246457354375559 1.900873595454017 1.5780358642812893 1.938466951356021 1.8944390883866267 1.7066174400601477 1.0 15.485637165908024 -9.074244375098338 0.6606033899874617 0.9514176386499184 1.9034042220864118 0.6768044833335332 0.18078823258501167 3.3204993659371773 1.532534914238389 0.6072543249105292 0.07323199834271266 8.428603514548114e-10 9.074244375098338 0.9519865834364934 RMEEEQHHWDDRR ddPTM_KYSE-520_SHP099_60min_R1 1 RMEEEQHHWDDRR 13 2 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 0 68.972 0.016405 9327900.0 7345.8 5962.8 6108.6 6520.6 3733.6 6347.4 4356.4 3904.5 11594.0 2769.7 False True 6938.313830510748 5676.338137654731 6502.370130105573 7140.31586351012 4027.413078721911 6307.783522151521 4796.787426366813 3890.956200817151 9488.821860955713 2745.162612793994 2.5274691554424944 2.0677602525984504 2.368664828743073 2.6010538793702973 1.4670945393004817 2.297781374682039 1.7473600303352155 1.4173864173594373 3.456560939862904 1.0 11.422675896086705 -5.741088063929492 24.999640093984194 1.9310536870991322 2.366519196870033 0.12545709116250015 0.6333681257333036 588.0722412843918 722387.2503547532 0.17819064737065865 0.22976531228201919 1.815147559467382e-06 5.741088063929492 0.4354655097709008 RMEEETKR ddPTM_KYSE-520_SHP099_60min_R1 1 RMEEETKR 8 2 F5GWE5;Q00169 F5GWE5 PITPNA Phosphatidylinositol transfer protein alpha isoform 0 69.27600000000001 0.015819999999999997 254890000.0 97108.0 90741.0 66772.0 52254.0 81362.0 84468.0 62606.0 76492.0 88370.0 61922.0 False True 91721.22566000135 86381.66615498222 71076.22995897738 57220.20444926206 87764.7265135451 83940.80388018624 68934.82545567906 76226.66710536709 72324.23562641504 61373.41925458703 1.4944780130226512 1.4074768393896528 1.1580946739196898 0.9323287694287204 1.430012008121669 1.367706164976502 1.123203274201264 1.2420143448284402 1.1784293022098415 1.0 15.905326341128522 -1.0000000000000004 0.03918955099044076 0.3978289605593483 2.5949839337142513 0.28733434532185154 0.15129442783071226 1269.9508093741724 3.8005795943002787 59.1338612559419 187.38212887601944 0.0999999999999999 1.0000000000000004 2.197154973154903 RMEELHNQEMQK ddPTM_KYSE-520_SHP099_60min_R1 2 RMEELHNQEMQK 12 1 P23246;P23246-2;H0Y9K7 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ; 146.36 5.0752e-05 2454900000.0 2644700.0 2476500.0 1794970.0 1622070.0 2526200.0 2403200.0 1772800.0 2118700.0 2107190.0 1972640.0 False True 2497993.2189212563 2357525.2226977153 1910676.6382535433 1776231.0451068713 2724997.567888179 2388200.7373782215 1952011.9248606828 2111350.724208298 1724577.413937146 1955163.9442906945 1.2776387505588398 1.2057941379197188 0.9772462528438808 0.9084818949805574 1.3937437706160078 1.2214836225637469 0.9983878490398639 1.0798842370092223 0.8820628157414175 1.0 20.898858154707693 -6.777444509367162 24.2241709568554 0.9967406313110458 1.1562923229821525 0.27369167753535106 0.13833047153537661 279.839229083126 423538.26600647974 0.06233870553765721 0.042194125349338765 1.66938109358555e-07 6.777444509367162 0.1595516916711066 RMEELHNQEVQK ddPTM_KYSE-520_SHP099_60min_R1 4 RMEELHNQEVQK 12 1 Q15233-2;Q15233;H7C367;C9JYS8 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 0 ;;; 189.24 1.7875999999999997e-07 3220650000.0 2731250.0 2407100.0 1685870.0 1503430.0 2523320.0 2340650.0 1625750.0 2050020.0 1980370.0 1849210.0 False True 2579742.1178881084 2291459.3028692366 1794543.8776873704 1646315.5351772895 2721890.9282731363 2326041.1351299677 1790096.675790984 2042908.9590982653 1620784.7290651093 1832827.4380636113 1.4075204595439792 1.2502318850541496 0.9791122941630077 0.8982381543330821 1.4850775756329924 1.2690999091477146 0.9766858781218528 1.114621549564211 0.8843084162781163 1.0 20.805639530887127 -6.76824138242579 24.979365072356806 1.003455716572968 1.2036591285537626 0.28018878745667775 0.17268267981386662 262.1189765263701 962582.3966576103 0.07661411619774536 0.05295879053638337 1.7051344057821346e-07 6.76824138242579 0.2002034119807945 RMES(ph)MRK ddPTM_KYSE-520_SHP099_60min_R1 1 RMESMRK 7 2 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RMES(1)MRK 54.538999999999994 0.047137 964870000.0 461460.0 503820.0 677980.0 563480.0 734010.0 457810.0 601650.0 635180.0 796840.0 749440.0 True False 435861.8939022961 479615.7309507628 721683.6756063548 617032.9697835612 791772.4110543897 454952.63797400304 662470.6535381493 632976.7088321266 652153.9427017381 742800.5446554972 0.5867818717128757 0.6456857556199065 0.9715712795297745 0.8306845952431744 1.0659286894055862 0.6124829084300216 0.8918553685840336 0.8521489562527101 0.8779664304153143 1.0 19.50261534756084 -4.664464921368826 5.983021549894599 0.8767419255130697 0.6037343662091699 0.46875931950055727 0.11559768208906826 0.1710991613209184 8.640627286535926 0.028483129326649287 0.07734221750055066 2.1653847736927786e-05 4.664464921368826 -0.27300755930389986 RMHS(ph)QPR ddPTM_KYSE-520_SHP099_60min_R1 8 RMHSQPR 7 1 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 1 RMHS(1)QPR;RMHS(1)QPR;RMHS(1)QPR;RMHS(1)QPR;RMHS(1)QPR;RMHS(1)QPR;RMHS(1)QPR;RMHS(1)QPR 145.9 0.00096667 6139640000.0 1482472.0 1695890.0 963932.0 882985.0 2045788.0 2638147.0 1191215.0 1273152.0 1498824.0 3338085.0 True False 1400236.322925336 1614416.8988172135 1026068.5990657302 966903.6289208783 2206779.876658545 2621681.346002061 1311634.6373380632 1268735.7328679094 1226675.3438783064 3308512.1638908284 0.4232223590433019 0.48795858042687396 0.31012991587707145 0.29224726433642434 0.6670006840970353 0.7924049289028302 0.3964424406998624 0.38347621831798534 0.3707634377972876 1.0 21.657751153020545 -5.760007037140565 24.999185672434603 0.5701293360458285 0.3813402034775493 0.23284192966325656 0.19351038648443245 70.90531251464371 1237517.9855717488 0.06009115767966017 0.07342346796473782 1.7377726703219994e-06 5.760007037140565 -0.18878913256827917 RMMLS(ph)NQNSK ddPTM_KYSE-520_SHP099_60min_R1 1 RMMLSNQNSK 10 1 Q5TB80-2;Q5TB80 Q5TB80-2 CEP162 Centrosomal protein of 162 kDa 1 RMMLS(1)NQNSK 67.02199999999999 0.020433 0.0 192080.0 189470.0 183430.0 159690.0 146060.0 192870.0 162520.0 202910.0 227220.0 193120.0 True False 181424.9394980132 180367.57679973176 195254.19129837697 174866.88958745063 157554.0910322805 191666.2267885063 178949.10764234993 202206.15256954986 185962.57575007406 191409.10704508625 0.947838597122125 0.9423144989503887 1.0200883035956332 0.9135766436978408 0.8231274544066953 1.00134329942493 0.9349038319279063 1.0564082121856426 0.9715450775613865 1.0 17.546299947814646 -7.2379247015724735 24.3014909701257 1.0104824863173218 0.9403856883218946 0.25979243680144937 0.05325509467542282 745.9703497911222 770932.3219607185 0.02589979051518132 0.014940151005185918 5.781962869873277e-08 7.2379247015724735 -0.07009679799542723 RMNS(ph)TGGQTPR ddPTM_KYSE-520_SHP099_60min_R1 4 RMNSTGGQTPR 11 1 Q96ST2;Q96ST2-3;Q96ST2-2;A0A1B0GW95 Q96ST2 IWS1 Protein IWS1 homolog 1 RMNS(0.976)T(0.024)GGQTPR;RMNS(0.401)T(0.401)GGQT(0.199)PR;RMNS(0.5)T(0.5)GGQTPR;RMNS(0.967)T(0.033)GGQTPR 159.12 2.3814e-05 1707220000.0 1034990.0 1255140.0 1285230.0 1157370.0 1021840.0 1025920.0 962830.0 966850.0 1538460.0 1043000.0 True False 977577.0414985869 1194841.1903964502 1368077.9822407062 1267366.0968240213 1102252.994525711 1019516.8527342976 1060162.252715259 963496.2230144873 1259114.4454205567 1033759.8314417212 0.9456519897230098 1.155820872561936 1.3234002140833157 1.2259773095037982 1.0662563595535208 0.9862221588862089 1.025540188804508 0.9320310131133248 1.2179951349672267 1.0 19.979469619354116 -5.912004609131384 5.5346815062569386 1.0275177739545256 1.1728734867742698 0.2308227930425908 0.11197663058539767 0.2934037032586363 14.422674567961604 0.03610650528249441 0.04109591492682643 1.2246032025836704e-06 5.912004609131384 0.14535571281974424 RMPS(ph)SGDK ddPTM_KYSE-520_SHP099_60min_R1 1 RMPSSGDK 8 1 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 RMPS(0.735)S(0.265)GDK 72.922 0.020659999999999998 455180000.0 773390.0 736080.0 664350.0 666280.0 721210.0 712200.0 779970.0 816550.0 928040.0 868080.0 True False 730488.5149852578 700717.6119213944 707175.0639975837 729603.0508756137 777965.1238764273 707754.8956228237 858816.9793736394 813717.5786342034 759531.3299845906 860389.4865560201 0.8490207358405414 0.8144190774880773 0.8219243436228801 0.8479915925008332 0.9042011043050721 0.8225982612314751 0.9981723310117664 0.9457549067589892 0.8827761634150761 1.0 19.714630370436556 -6.403979947455422 0.8134971321035855 0.9569581920116195 0.8253286730294981 0.5630271290335561 0.04457984089872014 0.4776136769246166 0.6710696144964717 0.03126309619113876 0.025770871550678098 3.9447551565057435e-07 6.403979947455422 -0.13162951898212139 RMS(ph)ADMSEIEAR ddPTM_KYSE-520_SHP099_60min_R1 9 RMSADMSEIEAR 12 1 O43318-3;O43318;Q9UG54;O43318-4;O43318-2 O43318-3 MAP3K7;DKFZp586F0420 Mitogen-activated protein kinase kinase kinase 7 1 RMS(1)ADMSEIEAR;RMS(1)ADMSEIEAR;RMS(1)ADMSEIEAR;RMS(1)ADMSEIEAR;RMS(0.689)ADMS(0.311)EIEAR;RMS(0.997)ADMS(0.003)EIEAR;RMS(1)ADMSEIEAR;RMS(1)ADMSEIEAR;RMS(1)ADMSEIEAR 233.14 2.3785999999999996e-15 5252810000.0 3377656.0 3361632.0 3017860.0 3016428.0 3234231.0 3099959.0 3034715.0 3248796.0 3631645.0 3239658.0 True False 3190290.6884896965 3200134.1528074974 3212396.0843467247 3303108.4101978503 3488746.5794428545 3080611.0060095955 3341493.608164253 3237526.684950684 2972229.8143203785 3210957.150535787 0.9935637689706815 0.9966293546687524 1.0004481323616223 1.0286990001242111 1.086512966658778 0.9594058287247957 1.0406534411730424 1.0082746462096088 0.9256522821627894 1.0 21.614571982092 -7.6166426718266225 8.612769252332663 0.9632394680423692 1.01564176469114 0.249826502521305 0.03581514270705485 0.35677784046790584 29.16198123745058 0.023886024622017606 0.008953334192062037 2.4174490415631857e-08 7.6166426718266225 0.05240229664877083 RMS(ph)DEFVDSFK ddPTM_KYSE-520_SHP099_60min_R1 20 RMSDEFVDSFK 11 1 Q92934;F5H1R6;F5H3B1 Q92934 BAD Bcl2-associated agonist of cell death 1 RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(0.979)DEFVDS(0.021)FK;RMS(1)DEFVDSFK;RMS(0.999)DEFVDS(0.001)FK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK;RMS(1)DEFVDSFK 231.41 3.6024e-11 34581840000.0 24453830.0 21654910.0 20306480.0 20468190.0 20990830.0 21909090.0 21695890.0 22152820.0 25123000.0 21611140.0 True False 23097327.30239848 20614575.618917394 21615468.192316785 22413480.62361427 22642688.899514735 21772347.242545728 23889122.292681433 22075977.03792706 20561296.499291882 21419682.11281248 1.0783225997823045 0.9624127711300859 1.0091404754969353 1.0463965107216664 1.0570973360043796 1.0164645361157014 1.1152883673465828 1.0306398069615612 0.9599253803581359 1.0 24.352433733577385 -3.9308768858649046 19.62145168627207 1.0267016842022691 2.250871473969344 0.12330164062817894 0.04346631497317624 409.4696342641243 182950.39570155865 0.010773689758212449 12451.036078428557 0.00011725277074995851 3.9308768858649046 1.2241697897670747 RMS(ph)DEFVDSFKK ddPTM_KYSE-520_SHP099_60min_R1 11 RMSDEFVDSFKK 12 2 Q92934;F5H1R6;F5H3B1 Q92934 BAD Bcl2-associated agonist of cell death 1 RMS(1)DEFVDSFKK;RMS(1)DEFVDSFKK;RMS(0.985)DEFVDS(0.015)FKK;RMS(1)DEFVDSFKK;RMS(1)DEFVDSFKK;RMS(1)DEFVDSFKK;RMS(1)DEFVDSFKK;RMS(1)DEFVDSFKK;RMS(1)DEFVDSFKK;RMS(1)DEFVDSFKK;RMS(1)DEFVDSFKK 181.72 2.1898000000000002e-07 18347020000.0 19721900.0 18550080.0 18036670.0 15329720.0 16481470.0 16425230.0 14197370.0 14785030.0 21886700.0 15411690.0 True False 18627886.892367035 17658906.31256227 19199342.607892357 16786651.979751628 17778467.922263466 16322714.046940293 15632578.712578608 14733744.18178196 17912626.998807948 15275154.41671337 1.2194892689258354 1.1560541930260755 1.2569000668749588 1.098951376974916 1.1638813878575973 1.0685793152493916 1.0233990626945257 0.9645561530730568 1.1726642173390258 1.0 23.86468362855018 -6.025719360980328 1.1669874895479815 1.0358672040070853 1.200320158246388 0.5441199426992379 0.06226764855232688 0.3543530657237035 1.0141603976201465 0.027972148893409706 0.03142219855916734 9.424984377748734e-07 6.025719360980328 0.16445295423930273 RMS(ph)FQKPK ddPTM_KYSE-520_SHP099_60min_R1 2 RMSFQKPK 8 2 Q8N573-3;Q8N573-2;Q8N573-5;Q8N573-8;Q8N573;E5RII8 Q8N573-3 OXR1 Oxidation resistance protein 1 1 RMS(1)FQKPK;RMS(1)FQKPK 109.6 0.00082993 5373200000.0 3536200.0 3380800.0 2294500.0 3321200.0 2299900.0 2604600.0 2844100.0 3618900.0 2757900.0 2133200.0 True False 3340039.9367600675 3218381.293315744 2442407.1413298054 3636845.8494448117 2480889.0453590467 2588343.725272687 3131609.3837411255 3606346.8805576107 2257134.881001361 2114301.5076044886 1.5797368183993516 1.522195997940796 1.1551839378372584 1.7201169447045286 1.1733847024353226 1.2242074822172786 1.4811555364633167 1.7056918644699899 1.0675558206259348 1.0 21.011749694629984 -7.899265260547977 7.632517263651957 1.0021082857514436 1.4314809134612796 0.4181935358996687 0.19427398079977468 0.2147072244603772 13.363298989279393 0.1865536779234116 0.04827639608492138 1.2610570646004398e-08 7.899265260547977 0.429372627709836 RMS(ph)GEPIQTVESIR ddPTM_KYSE-520_SHP099_60min_R1 5 RMSGEPIQTVESIR 14 1 Q5VT52-2;Q5VT52-3;Q5VT52 Q5VT52-2 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 RMS(1)GEPIQTVESIR;RMS(1)GEPIQTVESIR;RMS(0.857)GEPIQT(0.12)VES(0.023)IR;RMS(1)GEPIQTVESIR;RMS(1)GEPIQTVESIR 172.63 1.2869999999999999e-08 3606170000.0 685549.0 738811.0 702236.0 729781.0 732188.0 815880.0 887540.0 1005910.0 1090510.0 892533.0 True False 647520.2303619506 703317.410582081 747503.2561773268 799139.1668233413 789807.0300201515 810787.7902846799 977261.2047556686 1002420.732991159 892500.8735199942 884625.8520001668 0.7319707296569358 0.7950450566099309 0.8449936823428781 0.903364021090343 0.8928147738779881 0.9165318744093486 1.1047169857698036 1.1331578550690715 1.0089020929040473 1.0 19.754707878110707 -5.8956476292470485 0.7095590473483171 1.074424020506809 0.7586207258815499 0.7930646144616997 0.05566804759971422 0.3407192514504334 0.3785140411027736 0.038235596608908115 0.058321692971178236 1.2716054211727472e-06 5.8956476292470485 -0.315803294625259 RMS(ph)LIEEEGSKR ddPTM_KYSE-520_SHP099_60min_R1 5 RMSLIEEEGSKR 12 2 E9PK47;P06737-2;P06737 E9PK47 PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form 1 RMS(1)LIEEEGSKR;RMS(1)LIEEEGSKR;RMS(0.997)LIEEEGS(0.003)KR;RMS(1)LIEEEGSKR;RMS(0.999)LIEEEGS(0.001)KR 180.64 3.9706e-07 6252900000.0 3503370.0 3265570.0 2533850.0 2162580.0 2642270.0 2738420.0 2561070.0 2141300.0 2815680.0 2608370.0 True False 3309031.082305046 3108687.1154794986 2697186.025303342 2368110.952996614 2850201.616540216 2721328.5050146747 2819967.9492345136 2133872.330083178 2304423.489516629 2585261.871081154 1.2799597283818727 1.2024650772339163 1.0432931593793946 0.9160042854793168 1.102480815743538 1.0526316639159723 1.0907861910542958 0.8253989098561976 0.8913694644608368 1.0 21.301878993375052 -1.0000000000000697 0.4227307882651306 0.9535662033904491 7.552027205109232 0.5889969156480688 0.08498967723880224 59.36640087506564 0.7583976720642832 0.06231511928957718 331.8386657959921 0.09999999999998395 1.0000000000000697 6.598461001718783 RMS(ph)NELENYFK ddPTM_KYSE-520_SHP099_60min_R1 4 RMSNELENYFK 11 1 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 RMS(1)NELENYFK;RMS(1)NELENYFK;RMS(1)NELENYFK;RMS(1)NELENYFK 215.37 7.003099999999999e-10 1782060000.0 2106350.0 2535330.0 1995620.0 2430690.0 2398010.0 2580140.0 2719910.0 2957710.0 3063770.0 2810400.0 True False 1989506.566595377 2413528.9411920835 2124260.8583048955 2661702.046786406 2586719.7441895064 2564036.3892056607 2994865.0465635257 2947450.3943447066 2507466.599356591 2785502.042458116 0.714236261998825 0.8664610200975554 0.7626132833240731 0.9555555896981284 0.928636814750568 0.9204934514939292 1.0751616767513312 1.0581397354653082 0.9001848001316962 1.0 21.40950594316936 -5.237974581224712 0.729656517638839 1.0073773415690812 0.7268297836723018 0.6618666025557953 0.06402514802193836 0.637739301793908 0.5768601761300831 0.03226538481122421 0.12063694413129192 5.781298837176462e-06 5.237974581224712 -0.28054755789677943 RMS(ph)PKPELTEEQK ddPTM_KYSE-520_SHP099_60min_R1 9 RMSPKPELTEEQK 13 2 P41208 P41208 CETN2 Centrin-2 1 RMS(1)PKPELTEEQK;RMS(0.994)PKPELT(0.006)EEQK;RMS(1)PKPELTEEQK;RMS(0.999)PKPELT(0.001)EEQK;RMS(1)PKPELTEEQK;RMS(1)PKPELTEEQK;RMS(0.988)PKPELT(0.012)EEQK;RMS(1)PKPELTEEQK;RMS(1)PKPELTEEQK 260.25 2.9194999999999995e-22 23403940000.0 11544740.0 9714750.0 8318810.0 10048520.0 10067290.0 9665660.0 10901610.0 11478120.0 11366950.0 9955970.0 True False 10904330.258331368 9248038.827862969 8855053.803166613 11003528.319602294 10859528.447955415 9605333.030645477 12003651.128260657 11438305.080733355 9302998.417490982 9867767.851427458 1.1050452769573376 0.9371966352578065 0.8973715166886149 1.115098012567304 1.1005050596507993 0.9734048444660138 1.2164504991394 1.1591583074260006 0.9427662423316152 1.0 23.23429234459598 -5.277273426228465 24.894398727497926 1.082152818917069 0.9756036857534278 0.1647161430152545 0.09367082515657926 1176.8927287374013 1850315.3363631186 0.02648389700588725 0.03942654733978362 5.281126541417023e-06 5.277273426228465 -0.10654913316364123 RMS(ph)PKPELTEEQKQEIR ddPTM_KYSE-520_SHP099_60min_R1 5 RMSPKPELTEEQKQEIR 17 3 P41208 P41208 CETN2 Centrin-2 1 RMS(1)PKPELTEEQKQEIR;RMS(0.994)PKPELT(0.006)EEQKQEIR;RMS(0.98)PKPELT(0.02)EEQKQEIR;RMS(0.977)PKPELT(0.023)EEQKQEIR;RMS(0.999)PKPELT(0.001)EEQKQEIR 71.592 0.014667 7621580000.0 2789810.0 2739000.0 2927080.0 2439560.0 2569790.0 2364230.0 2535950.0 2657440.0 3514930.0 2363710.0 True False 2635053.6779516404 2607414.328677185 3115764.2602935936 2671415.0489195436 2772017.852895002 2349473.9636034127 2792308.5744869406 2648221.9608911555 2876707.3161746664 2342769.3683385523 1.1247601721121916 1.112962446886658 1.3299492055862223 1.1402808509546378 1.1832226809678943 1.0028618247085992 1.1918836793001066 1.1303809912664278 1.2279088821341269 1.0 21.159783505799485 -6.106012265398201 20.446154398135214 1.1204137385194781 1.1809702221181055 0.12453312230381741 0.08759137979533357 18.62885606193154 3572.381785557097 0.028646521896920345 0.02864660667796317 7.834075173622698e-07 6.106012265398201 0.06055648359862742 RMYEQQR ddPTM_KYSE-520_SHP099_60min_R1 1 RMYEQQR 7 1 Q9NZZ3;Q9NZZ3-2 Q9NZZ3 CHMP5 Charged multivesicular body protein 5 0 118.74 0.0063441 328710000.0 119750.0 111940.0 79703.0 68243.0 120690.0 108890.0 88423.0 107300.0 102000.0 90236.0 False True 113107.22878429342 106562.23437463441 84840.78290930901 74728.79420199397 130187.61636783466 108210.37711930527 97361.65976531818 106927.80134400818 83479.37121075403 89436.57924254563 1.2646640752834997 1.1914837897103066 0.948613907506758 0.8355506755164998 1.455641723670749 1.2099118507858673 1.0886111766560336 1.1955712332649442 0.9333918170591468 1.0 16.448577388792796 -7.765181397628681 24.97843338937584 0.9666958360286118 1.1433319511744764 0.1690107757937257 0.16111997215539986 194.78036165923524 1300087.8409087576 0.14364543196852933 0.042704251900191476 1.7171909950433416e-08 7.765181397628681 0.17663611514586464 RMYS(ph)FDDVLEEGK ddPTM_KYSE-520_SHP099_60min_R1 6 RMYSFDDVLEEGK 13 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 RMYS(1)FDDVLEEGK;RMYS(1)FDDVLEEGK;RMYS(1)FDDVLEEGK;RMYS(1)FDDVLEEGK;RMYS(1)FDDVLEEGK;RMYS(1)FDDVLEEGK 205.65 1.916e-09 3819240000.0 1885120.0 1714620.0 1374970.0 1480310.0 1691890.0 2177580.0 2282070.0 2492700.0 3093570.0 2656740.0 True False 1780548.6357064466 1632247.081502911 1463602.7662297837 1620998.217328568 1825032.117462722 2163988.915487715 2512763.906456913 2484053.4055005554 2531855.6705534537 2633203.3505124436 0.6761910869359697 0.6198712610574728 0.5558259547045442 0.6155993296199885 0.6930843822250018 0.8218085075224383 0.9542612445665877 0.9433579844933502 0.9615116394488611 1.0 21.328387507892973 -6.385297719540272 1.561272753888853 0.9682890690765412 0.6115058096512372 0.9623813081674997 0.03134815460020426 0.07075919693577802 0.3447629393197472 0.015444626032384301 0.01273635547521394 4.1181511292980257e-07 6.385297719540272 -0.356783259425304 RNAEQYKDQADK ddPTM_KYSE-520_SHP099_60min_R1 2 RNAEQYKDQADK 12 2 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ; 197.19 3.3593e-08 1986450000.0 2756300.0 2983400.0 2175200.0 1790800.0 2722200.0 2627600.0 1867450.0 2480500.0 2702900.0 2044140.0 False True 2603402.544452174 2840072.9858252998 2315416.872443053 1960997.0935763475 2936421.652800726 2611200.173741267 2056230.0705556679 2471895.7244530492 2212121.4945641854 2026030.509916857 1.284976969354233 1.4017918150412498 1.1428341582763586 0.9679010676185827 1.4493472030296468 1.2888256918936645 1.0149057778207151 1.2200683614357266 1.0918500406269622 1.0 20.95022446911689 -1.9434351853059475 0.02661539863592246 7.943216801703624e-06 2.7567682700645406 0.24867286602088934 0.13966138919729304 2312.421609192229 5.567607892868435 205.05412761870468 400.90904794492025 0.011391077711703411 1.9434351853059475 2.756760326847739 RNALFPEVFS(ph)PTPDENSDQNSR ddPTM_KYSE-520_SHP099_60min_R1 4 RNALFPEVFSPTPDENSDQNSR 22 1 Q8IVT2 Q8IVT2 MISP Mitotic interactor and substrate of PLK1 1 RNALFPEVFS(0.999)PT(0.001)PDENSDQNSR;RNALFPEVFS(0.996)PT(0.004)PDENSDQNSR;RNALFPEVFS(0.991)PT(0.009)PDENSDQNSR;RNALFPEVFS(0.99)PT(0.01)PDENSDQNSR 216.76 1.1765e-19 2600430000.0 1075300.0 1217510.0 1157770.0 1006490.0 1040330.0 1146620.0 985100.0 1220810.0 1761010.0 1336240.0 True False 1015650.965442594 1159018.9920802333 1232401.7066974975 1102146.5069877484 1122198.0523320043 1139463.5192629078 1084683.521649515 1216575.2950491963 1441254.9754495092 1324401.9531789897 0.7668751642994076 0.875126308367498 0.9305344980346321 0.8321842959701495 0.8473243713046246 0.8603607964544523 0.8189987330099646 0.9185846427733101 1.088230783705834 1.0 20.33690961280655 -7.586378200750104 4.41038343006176 1.0410726560286196 0.8522343619885719 0.7536102237842716 0.04444552621112824 0.10216031831752279 3.933449183888178 0.032515707868643225 0.011453262647922699 2.5919212318724714e-08 7.586378200750104 -0.1888382940400477 RNALHER ddPTM_KYSE-520_SHP099_60min_R1 2 RNALHER 7 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 107.9 0.0083203 117523000.0 109479.0 109495.0 37395.0 26921.0 143690.0 150065.0 57338.0 76898.0 60154.0 90748.0 False True 103405.98162902432 104234.69584465439 39805.54153411549 29479.563745906198 154997.58551573582 149128.3886712148 63134.284604953704 76631.25878612816 49231.54995893826 89944.04332087557 1.1496701483623908 1.1588838126033192 0.4425589518152873 0.3277544866505255 1.7232668200470107 1.6580129507765062 0.701928468789445 0.8519881468164154 0.5473575363218284 1.0 16.456740119547707 RNDDIS(ph)ELEDLS(ph)ELEDLKDAK ddPTM_KYSE-520_SHP099_60min_R1 5 RNDDISELEDLSELEDLKDAK 21 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 2 RNDDIS(1)ELEDLS(1)ELEDLKDAK;RNDDIS(1)ELEDLS(1)ELEDLKDAK;RNDDIS(1)ELEDLS(1)ELEDLKDAK;RNDDIS(1)ELEDLS(1)ELEDLKDAK;RNDDIS(1)ELEDLS(1)ELEDLKDAK 218.19 2.6826999999999996e-19 1508310000.0 2825184.0 2714141.0 2464189.0 2553206.0 2535378.0 2426178.0 2378138.0 2643136.0 3287360.0 2663914.0 True False 2668465.4116553203 2583749.592351304 2623034.565781804 2795861.9305906263 2734897.8242725004 2411035.3231569687 2618543.3974302467 2633967.5781285823 2690458.291601806 2640313.7944537336 1.0106622240359167 0.9785767122751663 0.9934556154998596 1.0589127460772423 1.0358230260423782 0.913162415854362 0.9917546175499223 0.997596415873567 1.0189918703047367 1.0 21.33227796966529 RNDDIS(ph)ELEDLSELEDLK ddPTM_KYSE-520_SHP099_60min_R1 2 RNDDISELEDLSELEDLK 18 1 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 RNDDIS(1)ELEDLSELEDLK;RNDDIS(1)ELEDLSELEDLK 234.55 1.1770999999999998e-23 121182000.0 167717.0 155595.0 144430.0 151524.0 147185.0 153625.0 156032.0 183198.0 179753.0 183842.0 True False 158413.4036744494 148119.98264714368 153740.18889617082 165924.79540264816 158767.62213190633 152666.1693906995 171805.23728557216 182562.5288967344 147114.38640437918 182213.30290691167 0.8693844035930732 0.8128933523740282 0.8437374573837395 0.9106074735246695 0.8713283805245374 0.8378431593915672 0.9428797708219101 1.0019165779021149 0.8073745662770645 1.0 17.47526876473613 -13.999997605604959 0.03290182856671122 1.6888671489962983 0.4382858242925883 0.34516023197922174 0.05503447321568081 1302.6111508645517 3.2125963610698927 99.37380786473445 36.86200990840145 1.0000055133135272e-14 13.999997605604959 -1.25058132470371 RNDDIS(ph)ELEDLSELEDLKDAK ddPTM_KYSE-520_SHP099_60min_R1 5 RNDDISELEDLSELEDLKDAK 21 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 RNDDIS(0.988)ELEDLS(0.012)ELEDLKDAK;RNDDIS(1)ELEDLSELEDLKDAK;RNDDIS(1)ELEDLSELEDLKDAK;RNDDIS(0.976)ELEDLS(0.024)ELEDLKDAK;RNDDIS(0.997)ELEDLS(0.003)ELEDLKDAK 222.05 2.534e-19 3088210000.0 1625196.0 1593135.0 1448819.0 1562666.0 1587646.0 1478401.0 1387966.0 1575687.0 2001309.0 1692057.0 True False 1535043.138132095 1516598.4032556117 1542212.190932363 1711181.306807336 1712584.7077299454 1469173.7509739925 1528275.1485227784 1570221.3095651092 1637921.7344943425 1677066.6913804272 0.915314308024668 0.9043160961042456 0.9195890651569362 1.0203418358985046 1.0211786546904003 0.8760377619596548 0.9112786965346169 0.9362903202571083 0.9766586760757476 1.0 20.67750863056436 -5.0250303929630915 24.7571227818141 0.9580797778072392 0.9103495235338847 0.20943443617951174 0.04406538096506728 1170.4781075820465 1157700.7312517145 0.013103633500306829 0.02282726182088066 9.439948109671304e-06 5.0250303929630915 -0.04773025427335453 RNDDISELEDLS(ph)ELEDLKDAK ddPTM_KYSE-520_SHP099_60min_R1 15 RNDDISELEDLSELEDLKDAK 21 2 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 1 RNDDIS(0.048)ELEDLS(0.952)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDIS(0.28)ELEDLS(0.72)ELEDLKDAK;RNDDIS(0.144)ELEDLS(0.856)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK;RNDDISELEDLS(1)ELEDLKDAK 310.9 6.801e-54 8293119000.0 6230332.0 5812252.0 5335420.0 5153462.0 5558927.0 5413559.0 4940030.0 5139703.0 6888303.0 5061499.0 True False 5884723.064101071 5533022.689551887 5679349.71017383 5643245.47903515 5996382.928931958 5379770.97022325 5439416.442446711 5121874.569908695 5637560.815187758 5016658.056646629 1.1730365110901535 1.1029300038142167 1.1320982307433118 1.1249013616860626 1.1952943296558314 1.0723814359034354 1.0842709192108406 1.0209734273442583 1.1237682041570458 1.0 22.258295174400168 -6.411200695210945 7.09976129932868 1.0616719178992622 1.1412653855443402 0.5389481656908612 0.03947990716269914 0.21563032807262403 12.18831665803774 0.013317096906444408 0.011704949232337 3.879710362360034e-07 6.411200695210945 0.07959346764507802 RNEDEDS(ph)PNKLYTLVTYVPVTTFK ddPTM_KYSE-520_SHP099_60min_R1 3 RNEDEDSPNKLYTLVTYVPVTTFK 24 2 H7C2W9;C9JU56;B7Z4E3;B7Z4C8;P62899-3;P62899;P62899-2 H7C2W9 RPL31 60S ribosomal protein L31 1 RNEDEDS(0.981)PNKLY(0.017)T(0.003)LVTYVPVTTFK;RNEDEDS(0.998)PNKLYT(0.002)LVTYVPVTTFK;RNEDEDS(0.342)PNKLY(0.294)T(0.342)LVT(0.011)Y(0.01)VPVTTFK 189.64 2.6669e-15 2225860000.0 928220.0 908730.0 877600.0 917100.0 887010.0 943400.0 886670.0 955810.0 1077600.0 676070.0 True False 876729.786239304 865073.2467684605 934171.5002096479 1004260.9082638298 956812.640603473 937511.8906635378 976303.2566652867 952494.5181977301 881935.0040853792 670080.5457745014 1.3083946277323282 1.2909988988989078 1.394118223697871 1.498716705919393 1.4279069085606075 1.3991032818001459 1.4569938835290956 1.4214627244502454 1.316162675736257 1.0 19.35397499688062 -10.144858078767202 9.13793865039297 0.9999999939758172 1.3950257181714947 0.7699438561519034 0.06398071344746598 8.550991186543458e-09 8.830915683062635e-10 0.06769301579875123 0.01641796753037457 7.16377473891516e-11 10.144858078767202 0.3950257241956775 RNEIDAEPPAKR ddPTM_KYSE-520_SHP099_60min_R1 4 RNEIDAEPPAKR 12 2 Q8TDN6 Q8TDN6 BRIX1 Ribosome biogenesis protein BRX1 homolog 0 ;;; 145.29 1.7925e-05 3651600000.0 4283760.0 3742000.0 2832350.0 2552450.0 4063660.0 3617520.0 2696850.0 3489930.0 3478830.0 2941330.0 False True 4046131.2933361502 3562228.7031434886 3014927.812920232 2795034.080577923 4383446.922937406 3594941.715829086 2969473.916719615 3477824.2473857887 2847162.166167724 2915272.104520113 1.3879086233709184 1.221919798711164 1.034184016046256 0.958755814335217 1.5036150197235092 1.2331410540563774 1.018592368141369 1.1929672849383224 0.9766368503829247 1.0 21.47519911673647 -7.453353485129598 1.1682217291480474 0.9946463941068124 1.2059676212958137 0.20877784414930267 0.15794912973235764 0.8943111578874936 2.171160821052493 0.15106608643382452 0.053750798848211954 3.520841826517985e-08 7.453353485129598 0.21132122718900126 RNELVIR ddPTM_KYSE-520_SHP099_60min_R1 2 RNELVIR 7 1 P11413;P11413-3;P11413-2 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 130.22 0.0050084 2733500000.0 1894080.0 1588060.0 1121060.0 1100200.0 1836630.0 1579690.0 1126100.0 1283730.0 1313990.0 1290520.0 False True 1789011.6066451308 1511767.213873344 1193325.3213594204 1204762.677212808 1981162.3320047753 1569830.5687537454 1239937.1776769047 1279277.0402548348 1075402.538992341 1279086.9968093657 1.3986629612432562 1.1819111738641628 0.9329508659974853 0.9418926783072951 1.5488878684145098 1.227305548934223 0.9693923718792242 1.0001485774196306 0.8407579325525879 1.0 20.286682961453877 -6.782664554588222 8.871194371090832 0.9520189259686218 1.1955090090052658 0.3244727505938846 0.17829436938231297 0.32135438730870103 116.75200577194781 0.07965223865888599 0.054866735589642626 1.6494359100840682e-07 6.782664554588222 0.243490083036644 RNEVLDR ddPTM_KYSE-520_SHP099_60min_R1 5 RNEVLDR 7 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ;;;; 97.431 0.014168 3750460000.0 3172250.0 2870920.0 2125680.0 1749770.0 2962270.0 2762910.0 2175990.0 2541890.0 2609440.0 2517890.0 False True 2996278.968776401 2732996.693861227 2262704.7340082536 1916067.6147124683 3195383.7959892736 2745665.653840572 2395960.304815883 2533072.776871586 2135631.4746293137 2495583.453488776 1.200632647482761 1.0951333605135714 0.9066836578215958 0.7677834263702318 1.280415524282384 1.1002099128370908 0.9600802175003917 1.0150222679712035 0.855764399160342 1.0 21.250945718373476 -4.527766135585804 5.017891024584268 0.9920993019096619 1.1804288599027668 0.21234635270197955 0.13161694178863562 0.272380237402505 19.980490852295773 0.03532538651564322 0.11605996175902836 2.9664283595653494e-05 4.527766135585804 0.1883295579931049 RNFAELK ddPTM_KYSE-520_SHP099_60min_R1 2 RNFAELK 7 1 P18124 P18124 RPL7 60S ribosomal protein L7 0 ; 141.52 0.0039726 568690000.0 1141380.0 1266680.0 856390.0 778350.0 1417390.0 1137400.0 905690.0 1040380.0 1221300.0 1139950.0 False True 1078065.3761153808 1205826.7914745584 911594.2696724483 852324.1499805388 1528930.529154073 1130301.0647028915 997245.9838826008 1036771.1646065162 999542.706467587 1129850.9298676807 0.9541660298864696 1.0672441466378007 0.8068270296323137 0.7543686759459112 1.35321438318693 1.0003984019690664 0.8826350074335828 0.9176176584002412 0.8846677734598543 1.0 20.107701008400497 -6.751044776945161 24.62472512618424 0.9143649137241241 0.9904686590105347 0.044046538777073874 0.15414134075122024 642.0974763064283 1521126.158639585 0.0626034625395935 0.04793245384935925 1.7740065665471153e-07 6.751044776945161 0.07610374528641062 RNFS(ph)CGSVEFDEADLESLR ddPTM_KYSE-520_SHP099_60min_R1 1 RNFSCGSVEFDEADLESLR 19 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 RNFS(0.587)CGS(0.413)VEFDEADLESLR 49.662 0.053757000000000006 131040000.0 50869.0 55611.0 63713.0 46165.0 41632.0 74235.0 56907.0 65854.0 83708.0 78765.0 True False 48047.19516516257 52939.36408618724 67820.04192440436 50552.507719986635 44908.20154632278 73771.67182892498 62659.714918799 65625.56784443915 68508.73730695891 78067.2033782428 0.6154594129927964 0.6781255353761186 0.8687392270965567 0.6475511550613011 0.5752505482838728 0.9449764899543592 0.8026381400548819 0.8406291631388052 0.8775610543524629 1.0 16.252428968109022 -6.269472243893409 24.955027683227392 0.8775426174486326 0.6860996406210434 0.5940246292540393 0.08871346899400748 500.2009530950004 1553927.7631975792 0.0319997864896601 0.02871537511385721 5.376847958881551e-07 6.269472243893409 -0.19144297682758915 RNFSCGS(ph)VEFDEADLESLR ddPTM_KYSE-520_SHP099_60min_R1 1 RNFSCGSVEFDEADLESLR 19 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 RNFS(0.423)CGS(0.577)VEFDEADLESLR 62.871 0.012977 306820000.0 208540.0 198750.0 125140.0 109770.0 173710.0 175780.0 121770.0 156050.0 228770.0 167220.0 True False 196971.87048581633 189201.751670168 133206.72463107927 120202.5077964462 187379.9887253009 174682.89181771973 134079.6999606753 155508.69897234376 187231.13482239435 165738.56089519133 1.1884492626334322 1.1415674822337463 0.8037159482476481 0.725253719757221 1.130575695319299 1.0539665052853002 0.8089831312428478 0.9382771162752122 1.129677570573298 1.0 17.33854977488459 -4.629408482223222 7.350121203106335 0.9442241633300632 1.176308214137916 0.30667805610905285 0.13060038711627317 0.25531263273110283 15.422310073541912 0.03497581906731035 0.09367285976750045 2.3474238772614723e-05 4.629408482223222 0.23208405080785277 RNGAAGPHS(ph)PDPLLDEQAFGDLTDLPVVPK ddPTM_KYSE-520_SHP099_60min_R1 7 RNGAAGPHSPDPLLDEQAFGDLTDLPVVPK 30 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 RNGAAGPHS(0.84)PDPLLDEQAFGDLT(0.16)DLPVVPK;RNGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;RNGAAGPHS(0.885)PDPLLDEQAFGDLT(0.115)DLPVVPK;RNGAAGPHS(0.991)PDPLLDEQAFGDLT(0.009)DLPVVPK;RNGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK;RNGAAGPHS(0.975)PDPLLDEQAFGDLT(0.025)DLPVVPK;RNGAAGPHS(1)PDPLLDEQAFGDLTDLPVVPK 200.91 6.3002e-16 2001647000.0 408787.0 463308.0 458854.5 512631.0 587087.0 1018517.0 1008138.0 1346262.0 1754933.0 1238813.0 True False 386110.77021331905 441049.98824051407 488432.99526315776 561351.2961118701 633287.406831908 1012160.0576033031 1110050.4275187268 1341592.1313419128 1436281.4054608052 1227838.0806019304 0.31446391532671286 0.3592085920843044 0.39779919109831674 0.4571867455329904 0.5157743653963296 0.8243432693560911 0.9040690666431686 1.0926458077307848 1.1697645057210544 1.0 20.227688889222172 -6.408562175310529 1.0219192876342011 1.108735218813605 0.35073759982662556 0.9706649439673585 0.053366052352894225 0.07748368819852598 0.16837534125268963 0.03198501935326976 0.025185417890242486 3.9033529656711256e-07 6.408562175310529 -0.7579976189869795 down RNLDIERPTYTNLNR ddPTM_KYSE-520_SHP099_60min_R1 1 RNLDIERPTYTNLNR 15 2 Q9BQE3;F5H5D3;F8VQQ4;Q9NY65;C9J2C0;Q9NY65-2;F8VVB9;P68363;P68366-2;P68366;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2;C9JDS9 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1A;TUBA8;TUBA1B;TUBA4A;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain 0 88.992 0.0016124000000000002 905720000.0 749540.0 991590.0 789910.0 441640.0 665640.0 780010.0 471510.0 569420.0 899160.0 642610.0 False True 707961.5220290541 943952.5279930647 840828.8625006876 483613.33281609224 718022.0810264765 775141.6682599811 519174.83229414595 567444.8149236271 735895.2099790355 636916.9753430153 1.1115444389714646 1.482065268372999 1.3201545806623451 0.7593035694419034 1.1273401539341632 1.217021524418507 0.8151373764446165 0.8909243070778988 1.1554020986529916 1.0 19.280745798146935 -5.224729526716251 22.556910458281536 0.9977421430294243 1.3223363755799504 0.433868292534333 0.16164767004699412 165.95309850023477 101971.1430924349 0.043880748290806494 0.0759976074977535 5.960332301579712e-06 5.224729526716251 0.3245942325505261 RNLLEDDS(ph)DEEEDFFLR ddPTM_KYSE-520_SHP099_60min_R1 1 RNLLEDDSDEEEDFFLR 17 1 O75379 O75379 VAMP4 Vesicle-associated membrane protein 4 1 RNLLEDDS(1)DEEEDFFLR 103.58 0.00041788 58472000.0 34256.0 33429.0 29233.0 27720.0 34926.0 27164.0 27345.0 39843.0 42457.0 30090.0 True False 32355.75139235701 31823.02066204802 31117.40595445378 30354.500465678095 37674.47749824339 26994.459400025815 30109.29946148208 39704.79393242613 34747.879053872406 29823.426009665764 1.0849106129480404 1.067047784910231 1.0433880381270964 1.017807292020716 1.2632511598779128 0.9051428025498116 1.0095855335910657 1.331329067276101 1.1651202998143348 1.0 14.864158378392963 -7.226994969494081 24.977861211945267 1.1861686834545377 1.0565398702529056 0.1590201860156939 0.11252431535705883 887.2911381627769 643433.151860843 0.05161503292627506 0.029798171004819393 5.929321925733865e-08 7.226994969494081 -0.1296288132016321 RNLS(ph)FR ddPTM_KYSE-520_SHP099_60min_R1 2 RNLSFR 6 1 Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7 Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 RNLS(1)FR;RNLS(1)FR 56.81 0.046508999999999995 0.0 113450.0 135680.0 122400.0 105280.0 143002.0 111328.0 108269.0 105480.0 142309.0 140352.0 True False 107156.70234303192 129161.72914016806 130290.09984692422 115285.77954641375 154255.4438299204 110633.16065697509 119213.88712361317 105114.11449921706 116469.27291795296 139108.59047220365 0.7703097413271808 0.9284957075744136 0.9366071455735042 0.8287466586720241 1.108885104121182 0.7953007091900737 0.8569843653719876 0.7556263358172745 0.8372543530388626 1.0 17.085851988845857 RNPDTQWITKPVHK ddPTM_KYSE-520_SHP099_60min_R1 3 RNPDTQWITKPVHK 14 2 A0A2R8YEM3;E7EQV9;E7ENU7;P61313 A0A2R8YEM3 RPL15 Ribosomal protein L15;60S ribosomal protein L15 0 ;; 193.96 1.0463999999999999e-10 7744640000.0 12247700.0 8463780.0 8081980.0 7758340.0 11959200.0 8696100.0 7821880.0 8110310.0 8907500.0 5644000.0 False True 11568295.665815344 8057167.304407214 8602957.362425216 8495690.300970018 12900321.001460005 8641824.414245497 8612591.964592338 8082177.227570585 7290122.539801876 5593998.550965557 2.0679833146933135 1.440323452178317 1.537890523933063 1.5187151415160114 2.3061001685875184 1.5448385149749222 1.5396128343840478 1.444794301238343 1.3032042238451347 1.0 22.415448449431615 -7.715832340538067 0.9455407936858136 1.015745051645107 1.7254647685113385 0.4665347853877677 0.2554914020740721 0.5003553550993978 0.9299747256128975 0.24656531725365324 0.08852184896658388 1.9238342821361076e-08 7.715832340538067 0.7097197168662315 RNPS(ph)PDHSYK ddPTM_KYSE-520_SHP099_60min_R1 1 RNPSPDHSYK 10 1 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 RNPS(0.957)PDHS(0.043)YK 112.62 0.0004185 3904300000.0 2012000.0 1632200.0 1747200.0 1814800.0 1923300.0 1801900.0 1847900.0 2002200.0 2052500.0 1865400.0 True False 1900390.349177439 1553786.6620178507 1859827.3076188427 1987278.0463604864 2074652.7679199318 1790653.6737191344 2034703.7657660516 1995254.8355169955 1679817.7393144402 1848874.007259239 1.027863630358765 0.8403961848764242 1.0059243086963188 1.074858556374221 1.1221168991365649 0.9685103834487835 1.1005096928061018 1.0791729602358089 0.9085625806404154 1.0 20.818215484009208 -4.987481083882459 24.43160534939946 1.0427802374273403 0.9313874252843366 0.2251423529816493 0.0741134589827246 215.28758379601993 420141.6123128115 0.0185798414497031 0.0386351145222437 1.0292453559982636e-05 4.987481083882459 -0.11139281214300367 RNPS(ph)PDHSYKR ddPTM_KYSE-520_SHP099_60min_R1 6 RNPSPDHSYKR 11 2 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 RNPS(1)PDHSYKR;RNPS(1)PDHSYKR;RNPS(1)PDHSYKR;RNPS(1)PDHSYKR;RNPS(1)PDHSYKR;RNPS(1)PDHSYKR 131.86 8.5354e-05 16129370000.0 2004820.0 1796070.0 2017070.0 1667340.0 1850190.0 1665240.0 1649850.0 1559670.0 2300760.0 1249550.0 True False 1893608.6380904126 1709784.101243966 2147093.559626107 1825803.4922959513 1995789.4268589297 1654846.619470585 1816632.9389843163 1554259.8687997158 1882999.9814397483 1238479.9591351892 1.5289780219073463 1.380550479345569 1.7336522434528439 1.474229339626037 1.6114830216974667 1.3361916817984991 1.4668246551626416 1.2549737743717957 1.520412153261339 1.0 20.240139092659998 -10.645819429596331 0.22264195692717928 0.5240017114820092 1.5787626251139193 0.6030730427678188 0.12170966208141816 16.99460921486263 0.6504550642519309 4.653820234577611 0.2538613418198116 2.2603753908564137e-11 10.645819429596331 1.05476091363191 RNPS(ph)PDHTYK ddPTM_KYSE-520_SHP099_60min_R1 2 RNPSPDHTYK 10 1 Q15695 Q15695 ZRSR1 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 1 RNPS(0.985)PDHT(0.015)YK;RNPS(0.996)PDHT(0.004)YK 69.352 0.016123 1535940000.0 716050.0 627780.0 575710.0 566730.0 619610.0 699080.0 637360.0 639050.0 753370.0 607550.0 True False 676329.2790897134 597620.5064830085 612821.1877685683 620591.8488064128 668369.7819013511 694716.7824094415 701790.5688341645 636833.284705392 616576.9989122135 602167.5796667482 1.1231579080760339 0.9924488243185459 1.0176920984482691 1.0305965810212847 1.1099398314855153 1.153693433302922 1.1654406390037633 1.0575682022898485 1.0239292511454035 1.0 19.199805510773913 -3.8913424961320446 19.556233123807967 1.0677783358538482 8.509836075441607 0.08078673016579752 0.0590622238319866 1380.5267379755296 249618.8985300547 0.015810542892441215 2126.11978957927 0.0001284273448414079 3.8913424961320446 7.442057739587758 RNPS(ph)PDHTYKR ddPTM_KYSE-520_SHP099_60min_R1 1 RNPSPDHTYKR 11 2 Q15695 Q15695 ZRSR1 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 1 RNPS(0.993)PDHT(0.007)YKR 103.66 0.00069625 644560000.0 289300.0 277090.0 305280.0 238170.0 285850.0 249180.0 236620.0 242630.0 330260.0 185500.0 True False 273251.95229474804 263778.1804794305 324958.83726527035 260805.60519157842 308344.7687359813 247624.77519137197 260539.8587886593 241788.3731602675 270293.1091770946 183856.6143168163 1.4862231272457151 1.4346950826848996 1.7674579643096815 1.418527183048013 1.6770936954416593 1.3468363708942896 1.417081782761999 1.3150920572464415 1.4701299171719406 1.0 17.488221553455155 -9.280598676190783 0.2870460045204173 0.820950114814673 1.5774065020075823 0.6103045766840094 0.12247757320499046 5.025872422632667 0.5344681580330929 1.0673988014565214 0.1607274676041545 5.240845100672822e-10 9.280598676190783 0.7564563871929093 RNPSPDHS(ph)YK ddPTM_KYSE-520_SHP099_60min_R1 2 RNPSPDHSYK 10 1 Q15696 Q15696 ZRSR2 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 1 RNPS(0.27)PDHS(0.73)YK;RNPS(0.096)PDHS(0.904)YK 129.54 0.00024134 6228100000.0 5114900.0 4313200.0 3953900.0 4605200.0 4715300.0 4756200.0 4380700.0 5054200.0 5202000.0 4223400.0 True False 4831166.300699637 4105987.3977548103 4208774.720463675 5042876.823396129 5086367.283612983 4726514.79157719 4823543.907511955 5036668.1598591525 4257447.93174846 4185983.961755483 1.1541291951519048 0.9808894241517532 1.0054445403796135 1.2047052424160003 1.2150947853799003 1.1291287388485416 1.1523082629034005 1.203222039519453 1.0170722034880915 1.0 21.99713535336401 -3.923356052421324 21.3694311498549 1.1108387644707145 3.035663362349865 0.020479316030502348 0.08907374444661321 4419.9436199575275 1360973.450982578 0.022563261379284768 42710.33439963159 0.0001193009625219016 3.923356052421324 1.9248245978791503 RNQEIQQGEDAFPPS(ph)SPLFAEPYK ddPTM_KYSE-520_SHP099_60min_R1 1 RNQEIQQGEDAFPPSSPLFAEPYK 24 1 Q9UHB7;Q9UHB7-2;Q9UHB7-3;C9JCE0 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 RNQEIQQGEDAFPPS(0.5)S(0.5)PLFAEPYK 75.275 0.009729600000000001 86278000.0 99181.0 86118.0 87742.0 78678.0 83108.0 86490.0 83802.0 79087.0 108860.0 82226.0 True False 93679.2322175782 81980.76201424659 93397.98971216373 86155.53346459683 89648.12678016417 85950.1838281634 92273.52398870421 78812.66565604454 89093.76813728132 81497.54161085997 1.1494731051506337 1.0059292635561197 1.1460221727684354 1.0571549983185768 1.100010196727432 1.0546352948726259 1.132224631134251 0.9670557430108093 1.0932080450069566 1.0 16.314468920373976 -7.634446819509404 0.6519534765144981 1.0047292428414796 1.0908884972503357 0.19505157696909647 0.05487311877106266 1.1099626245119043 1.0569127778795904 0.04939730943546983 0.02269173819389538 2.3203483008676292e-08 7.634446819509404 0.08615925440885608 RNS(ph)CNVGGGGGGFK ddPTM_KYSE-520_SHP099_60min_R1 7 RNSCNVGGGGGGFK 14 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 RNS(1)CNVGGGGGGFK;RNS(1)CNVGGGGGGFK;RNS(1)CNVGGGGGGFK;RNS(1)CNVGGGGGGFK;RNS(1)CNVGGGGGGFK;RNS(1)CNVGGGGGGFK;RNS(1)CNVGGGGGGFK 165.16 2.3602e-08 17229410000.0 11250390.0 9640050.0 9780870.0 12384770.0 12617450.0 15646950.0 17621630.0 20868700.0 19495590.0 17043430.0 True False 10626308.439603563 9176927.52798994 10411360.530145323 13561814.817183139 13610371.531529853 15549291.581108605 19402996.330935676 20796311.35049118 15955682.29983005 16892438.469787892 0.6290571049649644 0.5432565312819025 0.6163326004570643 0.8028334595646703 0.805707924043766 0.9204882769837225 1.1486202164144574 1.2311017966817142 0.94454582909192 1.0 24.009874264366463 -5.960860469358802 1.0030534421709094 1.0993875742062411 0.5823493162000696 0.8279256610023934 0.08997827594450387 0.2030401618849688 0.4407181534581166 0.0461942961962071 0.05726095236523861 1.094307890324241e-06 5.960860469358802 -0.5170382580061715 RNS(ph)CNVGGGGGGFKHPAFK ddPTM_KYSE-520_SHP099_60min_R1 2 RNSCNVGGGGGGFKHPAFK 19 2 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 RNS(1)CNVGGGGGGFKHPAFK;RNS(1)CNVGGGGGGFKHPAFK 152.48 6.3245e-07 1548830000.0 1458260.0 1428470.0 1655250.0 1433220.0 1495390.0 1855760.0 1888240.0 2001440.0 2943700.0 1657740.0 True False 1377367.410830761 1359844.157022818 1761950.0634936423 1569432.7978866964 1613068.6853947844 1844177.5134807779 2079121.7266465116 1994497.4717796065 2409198.284638205 1643053.7133022032 0.8382972508321308 0.8276321985176055 1.072363033069979 0.9551926301499032 0.9817504274725414 1.1224085363431953 1.2654009481332784 1.2138966946923926 1.4662930768077005 1.0 20.64794821373149 -6.339455555989768 1.3315006128626405 1.2636643245207082 0.9157790161123446 0.5719091634979285 0.12358887485465318 0.301227995451501 1.0814738006453928 0.059849485911655946 0.050548316883713154 4.576615677969748e-07 6.339455555989768 -0.3478853084083636 RNS(ph)EGSELSCTEGSLTSSLDSR ddPTM_KYSE-520_SHP099_60min_R1 4 RNSEGSELSCTEGSLTSSLDSR 22 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 RNS(0.497)EGS(0.497)ELS(0.004)CT(0.001)EGSLTSSLDSR;RNS(0.941)EGS(0.058)ELSCTEGSLTSSLDSR;RNS(0.678)EGS(0.224)ELS(0.09)CT(0.008)EGSLTSSLDSR;RNS(0.977)EGS(0.023)ELSCTEGSLTSSLDSR 199.78 3.6794999999999996e-14 2701430000.0 409686.0 417642.0 339718.0 345687.0 365961.0 363037.0 350958.0 370457.0 460888.0 407659.0 True False 386959.90089120646 397577.8514265774 361616.7658480185 378540.98854541354 394760.04866674275 360771.1514212625 386436.2596600043 369171.97113231337 377202.35724099993 404047.45841390255 0.9577090335136034 0.9839880022690362 0.8949858694014642 0.9368725892532148 0.9770140622004708 0.8928930102356732 0.9564130440938017 0.9136846760068886 0.9335595346193151 1.0 18.62416523275345 RNS(ph)EKDDKYK ddPTM_KYSE-520_SHP099_60min_R1 3 RNSEKDDKYK 10 3 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 RNS(1)EKDDKYK;RNS(1)EKDDKYK;RNS(1)EKDDKYK 122.78 0.00061795 5542100000.0 6083000.0 5957100.0 3538600.0 3430550.0 7531400.0 8251900.0 4996000.0 4699300.0 5739400.0 7230300.0 True False 5745563.863840134 5670911.974210597 3766703.8179601855 3756588.4405675307 8124078.332195802 8200396.831213111 5501044.436261267 4682999.225124869 4697269.638500014 7166245.167088284 0.8017537399121125 0.7913365844996263 0.525617492862114 0.5242059618361996 1.1336590003236933 1.1443087195612947 0.7676327432286825 0.6534801860578289 0.6554715236470986 1.0 22.772785970295665 -4.2587760676201425 13.609779132607768 0.7917511539468425 0.8017567612404373 0.0 0.21569557706842024 31.883361192118954 153833.9475459851 0.05890560688104562 0.36033629248843513 5.510917789538768e-05 4.2587760676201425 0.010005607293594787 RNS(ph)EPPPAAALPLGR ddPTM_KYSE-520_SHP099_60min_R1 4 RNSEPPPAAALPLGR 15 1 Q3KP66-3;Q3KP66 Q3KP66-3 C1orf106 Uncharacterized protein C1orf106 1 RNS(1)EPPPAAALPLGR;RNS(1)EPPPAAALPLGR;RNS(1)EPPPAAALPLGR;RNS(1)EPPPAAALPLGR 136.61 9.141900000000001e-06 1610530000.0 855270.0 786180.0 745670.0 623900.0 733167.0 876230.0 776480.0 851030.0 913720.0 795650.0 True False 807826.4681615239 748410.732719762 793737.0813141837 683195.2684176246 790863.0717504044 870761.1235489857 854974.176114521 848077.9755618947 747811.4810067675 788601.1600063338 1.0243790006028342 0.9490357999394154 1.0065126981398411 0.8663381479329011 1.0028682582004476 1.1041844315090685 1.0841655065631073 1.0754206544092366 0.9482759079390161 1.0 19.588936307040992 -6.001794222326507 24.99930309590185 1.0501543583081263 0.9602219889656952 0.30249705441143016 0.05727768271446189 79.26405980273907 1104429.5522624417 0.01779721203442962 0.01988734841379667 9.958771727019367e-07 6.001794222326507 -0.0899323693424311 RNS(ph)FS(ph)ENEK ddPTM_KYSE-520_SHP099_60min_R1 1 RNSFSENEK 9 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 2 RNS(1)FS(1)ENEK 67.997 0.0544 0.0 1455200.0 1377900.0 1329900.0 1398300.0 1403400.0 1454900.0 1432900.0 1528400.0 1810700.0 1343000.0 True False 1374477.1551307207 1311703.6157299348 1415627.4819152346 1531194.0115857744 1513839.595746287 1445819.4294322475 1577751.5157563575 1523098.3371312434 1481922.5240324757 1331102.0648381885 1.032585848552346 0.9854267755864298 1.0635003275179513 1.1503205141312056 1.1372828844122576 1.0861822452420313 1.1852971739985636 1.1442385804700816 1.113304954727586 1.0 20.344189766261792 -5.01821732868426 4.0897876535208155 1.1246906138517168 1.0102206436808678 0.43956280342328224 0.048220385420080454 0.16210695915749943 6.254706671919856 0.01244149964797035 0.024971319386695046 9.589206504790141e-06 5.01821732868426 -0.11446997017084892 RNS(ph)FSENEK ddPTM_KYSE-520_SHP099_60min_R1 11 RNSFSENEK 9 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 RNS(0.982)FS(0.018)ENEK;RNS(0.997)FS(0.003)ENEK;RNS(0.991)FS(0.009)ENEK;RNS(0.998)FS(0.002)ENEK;RNS(0.996)FS(0.004)ENEK;RNS(0.993)FS(0.007)ENEK;RNS(0.998)FS(0.002)ENEK;RNS(0.968)FS(0.032)ENEK;RNS(0.92)FS(0.08)ENEK;RNS(0.996)FS(0.004)ENEK;RNS(0.914)FS(0.086)ENEK 268.74 2.0561999999999997e-19 25068930000.0 28986380.0 28594240.0 25823200.0 26323660.0 27793500.0 27406450.0 27281560.0 27500750.0 30411090.0 25618310.0 True False 27378447.71848406 27220529.78957072 27487804.790580872 28825452.73190306 29980690.326617036 27235396.17964356 30039446.32716734 27405356.31697331 24889202.65719265 25391351.704143595 1.0782587724156565 1.0720394135271114 1.082565635373211 1.1352468772743225 1.1807441634438276 1.0726249038249915 1.1830581796976656 1.0793185268865009 0.9802236189391603 1.0 24.59783386285813 -7.653508700279309 4.338691342004414 0.9905834873290363 1.1147322204267598 0.6039491135886403 0.03974984693053482 0.1479680828414403 4.727749102805558 0.03150381473243979 0.010611461536898154 2.22070719528156e-08 7.653508700279309 0.12414873309772345 RNS(ph)FTPLSSSNTIR ddPTM_KYSE-520_SHP099_60min_R1 9 RNSFTPLSSSNTIR 14 1 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 RNS(0.999)FT(0.001)PLSSSNTIR;RNS(0.999)FT(0.001)PLSSSNTIR;RNS(0.973)FT(0.024)PLS(0.002)SSNTIR;RNS(0.998)FT(0.001)PLSS(0.001)SNTIR;RNS(0.978)FT(0.013)PLSS(0.005)S(0.005)NTIR;RNS(0.928)FT(0.013)PLS(0.023)S(0.03)S(0.005)NT(0.001)IR;RNS(1)FTPLSSSNTIR;RNS(0.976)FT(0.024)PLSSSNTIR;RNS(0.338)FT(0.214)PLS(0.214)S(0.122)S(0.111)NTIR 251.05 7.389e-19 62201000000.0 13215900.0 13811451.0 12964440.0 12226439.0 12346540.0 12663620.0 12193660.0 12721830.0 16564060.0 12977150.0 True False 12482787.681756508 13147928.162549406 13800148.546237404 13388436.086547082 13318142.455796894 12584581.65024866 13426314.151453467 12677700.941027446 13556444.24997259 12862182.54706992 0.9705030725598089 1.0222159508647761 1.0729243264690842 1.0409147932360083 1.0354496530474795 0.9784172790422339 1.043859710614359 0.9856570527305647 1.0539769747756245 1.0 23.616632134456555 RNS(ph)HLLR ddPTM_KYSE-520_SHP099_60min_R1 4 RNSHLLR 7 1 Q969J2 Q969J2 ZKSCAN4 Zinc finger protein with KRAB and SCAN domains 4 1 RNS(1)HLLR;RNS(1)HLLR;RNS(1)HLLR;RNS(1)HLLR 123.96 0.0015294 812910000.0 641270.0 581860.0 509710.0 538930.0 496927.0 552670.0 503110.0 547690.0 693840.0 467480.0 True False 605697.474759948 553906.5722103344 542566.7221648347 590149.7451647875 536032.3277721353 549220.581527472 553969.2686804252 545790.1912218073 567856.1462830359 463338.4908939366 1.3072461853781083 1.195468503257006 1.170994279188936 1.2736903079780597 1.1568914266931454 1.1853549668792676 1.1956038178732598 1.177951329208142 1.2255751625284776 1.0 18.821707010715166 -13.805366582939072 0.23199791581203605 5.041513967151725e-14 1.2291303917272927 0.6773529702972316 0.04392129435851028 86.78284165071003 0.9442567300241884 40.80127738178706 0.07371830436247678 1.5654291516736803e-14 13.805366582939072 1.2291303917272423 RNS(ph)IEVAGLSHGLEGLR ddPTM_KYSE-520_SHP099_60min_R1 7 RNSIEVAGLSHGLEGLR 17 1 Q16825 Q16825 PTPN21 Tyrosine-protein phosphatase non-receptor type 21 1 RNS(1)IEVAGLSHGLEGLR;RNS(1)IEVAGLSHGLEGLR;RNS(1)IEVAGLSHGLEGLR;RNS(1)IEVAGLSHGLEGLR;RNS(1)IEVAGLSHGLEGLR;RNS(1)IEVAGLSHGLEGLR;RNS(1)IEVAGLSHGLEGLR 267.24 8.2782e-30 8935630000.0 1615160.0 1467401.0 1437586.0 1440227.0 1579686.0 1619013.0 1282101.0 1609430.0 1958708.0 1559172.0 True False 1525563.8550583657 1396904.8533461934 1530255.0937789257 1577105.7410599636 1703998.3010161505 1608908.139324621 1411708.2811799468 1603847.2629737845 1603056.0022105265 1545358.9490974604 0.9871906173962653 0.9039355252461126 0.9902263125810635 1.0205433125948145 1.1026553423147034 1.0411226079638491 0.913514806384905 1.0378477206932948 1.037335696762725 1.0 20.559510549159818 -4.9857363847088045 5.112361791865527 1.0221188629186297 0.9449329525696951 0.2848694307800239 0.04808132303725666 0.22404234677232693 17.109886064440037 0.013555002365469342 0.02774828366163067 1.0333884787607497e-05 4.9857363847088045 -0.07718591034893463 RNS(ph)LDGGGR ddPTM_KYSE-520_SHP099_60min_R1 7 RNSLDGGGR 9 1 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 RNS(1)LDGGGR;RNS(1)LDGGGR;RNS(1)LDGGGR;RNS(1)LDGGGR;RNS(1)LDGGGR;RNS(1)LDGGGR;RNS(1)LDGGGR 159.93 9.515e-05 8468820000.0 4763490.0 3941607.0 3894410.0 3889564.0 4155546.0 4265866.0 4195689.0 4027356.0 4772120.0 4464614.0 True False 4499249.713918112 3752246.2832472776 4145449.899876316 4259226.993119943 4482563.828377579 4239241.147951352 4619830.190098599 4013386.042027961 3905623.303355524 4425060.99337713 1.0167655814579775 0.8479535737164221 0.9368119232888993 0.9625239063358932 1.0129948118424836 0.958007393411325 1.044015030982166 0.90696739503358 0.8826145694264929 1.0 22.07726591022292 -1.9422331930139292 7.501756692418317 0.9548685423816633 0.9865560351649948 0.0 0.06044362420493996 0.0 0.0 0.013966570754339012 0.0 0.011422648346966852 1.9422331930139292 0.031687492783331495 RNS(ph)LEGYSR ddPTM_KYSE-520_SHP099_60min_R1 3 RNSLEGYSR 9 1 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 RNS(1)LEGYSR;RNS(1)LEGYSR;RNS(1)LEGYSR 139.19 0.00028197 3717470000.0 1673080.0 1572840.0 1280700.0 1318230.0 1389110.0 1374090.0 1176930.0 1371630.0 1699220.0 1236310.0 True False 1580270.9171977087 1497278.4055190282 1363255.9711924517 1443514.1828596983 1498425.0540452655 1365513.7946171958 1295905.570129898 1366872.1356708477 1390684.4818503677 1225357.255234625 1.2896409683354972 1.2219117315564734 1.1125375602655754 1.1780353661702536 1.2228474982656017 1.1143801440631569 1.0575736705306933 1.1154886706155962 1.1349216531827584 1.0 20.22477100035903 -1.0000000000020313 0.11477018417766795 0.9589671071301175 1.8778727223908402 0.6820225529434023 0.045678800994772326 66.18106859265089 0.5275227558525538 0.39615298965774776 9.672138105268482 0.09999999999953228 1.0000000000020313 0.9189056152607228 RNS(ph)LGGDVLFVGK ddPTM_KYSE-520_SHP099_60min_R1 6 RNSLGGDVLFVGK 13 1 Q9H0D6-2;Q9H0D6 Q9H0D6-2 XRN2 5-3 exoribonuclease 2 1 RNS(1)LGGDVLFVGK;RNS(1)LGGDVLFVGK;RNS(1)LGGDVLFVGK;RNS(1)LGGDVLFVGK;RNS(1)LGGDVLFVGK;RNS(1)LGGDVLFVGK 160.38 1.0541e-05 2914760000.0 6224790.0 6008260.0 5887480.0 5115910.0 5344450.0 5830530.0 5253590.0 5380840.0 6758830.0 5696490.0 True False 5879488.489888772 5719614.171017872 6266996.381101062 5602124.548245569 5765027.809239161 5794139.499544717 5784674.147297403 5362175.121937498 5531596.848239022 5646023.530402163 1.0413503341297587 1.0130340655187577 1.1099841060447488 0.9922247964571506 1.0210775385890964 1.0262336790388835 1.0245572155604112 0.9497259607693406 0.9797332261286219 1.0 22.428803710708976 -7.145617787028961 5.563390100165518 0.9738954042739201 1.0332895754919273 0.4101431126130566 0.0309280410862309 0.2182899215044224 9.119239557673712 0.014779793648141897 0.008410013981693595 7.151254152773397e-08 7.145617787028961 0.059394171218007275 RNS(ph)LIELPDDYSCLLNQASHFR ddPTM_KYSE-520_SHP099_60min_R1 4 RNSLIELPDDYSCLLNQASHFR 22 1 Q8IWV7 Q8IWV7 UBR1 E3 ubiquitin-protein ligase UBR1 1 RNS(1)LIELPDDYSCLLNQASHFR;RNS(1)LIELPDDYSCLLNQASHFR;RNS(1)LIELPDDYSCLLNQASHFR;RNS(1)LIELPDDYSCLLNQASHFR 268.99 2.4325e-36 766620000.0 168388.0 180312.0 143771.0 157044.0 179873.0 171123.0 141536.0 126362.0 189441.0 139724.0 True False 159047.1819668441 171649.5408661702 153038.70870173353 171969.4145429998 194027.9817626279 170054.95788214603 155843.84013824546 125923.67971511243 155043.28981898472 138486.1540636271 1.148469917749108 1.2394707761709252 1.1050831018920513 1.2417805643153965 1.4010641213523936 1.2279563905285054 1.1253387834472133 0.9092871454662329 1.1195580588348961 1.0 17.079382216326522 -6.97905774275256 3.914477165785779 1.0099607898224077 1.2296598538954058 0.5600690482974453 0.08635397730443295 0.1669469030038676 5.690637734608942 0.04182931802367685 0.02577410873383277 1.0494028932849238e-07 6.97905774275256 0.2196990640729981 RNS(ph)LILK ddPTM_KYSE-520_SHP099_60min_R1 1 RNSLILK 7 1 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 RNS(1)LILK 125.97 0.001467 262990000.0 313060.0 279470.0 245740.0 283040.0 297940.0 302030.0 282980.0 311800.0 314740.0 300200.0 True False 295693.9377303622 266043.8417069777 261580.79359790194 309940.0365009207 321386.1829532911 300144.9187376599 311586.38001865766 310718.4385746673 257591.14994973282 297540.4615520658 0.9937940412807335 0.894143405973118 0.8791436036410417 1.0416735757018551 1.0801427855453287 1.0087532874420118 1.0472067509518668 1.0442896974544604 0.8657348604154721 1.0 18.182726343567676 -5.267552555774319 24.969661022347974 1.0184914764954103 0.9195386547025128 0.31011440337242024 0.061147611934392936 532.2782502182417 2174124.4354315796 0.017228594143258082 0.026318375117283615 5.4006675509473285e-06 5.267552555774319 -0.09895282179289744 RNS(ph)LILKPKPDPAQQTDSQNSDTEQYFR ddPTM_KYSE-520_SHP099_60min_R1 5 RNSLILKPKPDPAQQTDSQNSDTEQYFR 28 3 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 RNS(1)LILKPKPDPAQQTDSQNSDTEQYFR;RNS(1)LILKPKPDPAQQTDSQNSDTEQYFR;RNS(0.991)LILKPKPDPAQQT(0.007)DS(0.001)QNSDTEQYFR;RNS(1)LILKPKPDPAQQTDSQNSDTEQYFR;RNS(1)LILKPKPDPAQQTDSQNSDTEQYFR 246.33 5.0928e-31 20613700000.0 8313140.0 7350850.0 7565270.0 7216770.0 6903020.0 6750590.0 6923130.0 7213710.0 8339310.0 6656440.0 True False 7851993.552366259 6997704.132149197 8052939.40905999 7902649.650998989 7446248.401188921 6708457.063805789 7622987.543637606 7188687.323702567 6825101.520897577 6597469.120231961 1.190152376505582 1.060664931449223 1.2206103980638043 1.1978304872643555 1.1286522552040559 1.0168228060717206 1.1554411858118085 1.0896128792263025 1.0345029884213557 1.0 22.653481262288757 -6.024933074944942 8.781501639091143 1.0710050875196806 1.163524992512599 0.44056605338560917 0.057018456558554954 0.3304606758617217 108.63159170493704 0.018590853956540598 0.019136296788401813 9.44206367875497e-07 6.024933074944942 0.0925199049929184 RNS(ph)LPQIPMLNLEAR ddPTM_KYSE-520_SHP099_60min_R1 12 RNSLPQIPMLNLEAR 15 1 Q14289;Q14289-2;H0YB74 Q14289 PTK2B Protein-tyrosine kinase 2-beta 1 RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR;RNS(1)LPQIPMLNLEAR 207.37 1.0572e-12 4054930000.0 1299360.0 1300900.0 1249949.0 1047617.0 1095075.0 1180486.0 1027766.0 1107960.0 1545091.0 1125822.0 True False 1227281.910590058 1238402.8113092894 1330522.7125291133 1147182.204702463 1181251.1723755628 1173118.1489949517 1131662.6173095473 1104116.7453598091 1264541.4229744638 1115848.0929562612 1.0998646843931692 1.1098310057853296 1.1923869574433792 1.0280809833739888 1.058612888109193 1.0513242406383136 1.0141726498912482 0.9894866087324021 1.133255889360588 1.0 20.089709207194254 -5.282583876899756 24.696215956294818 1.0390998337007085 1.1316078984945706 0.4938525708608792 0.04393696522690966 556.3014856704507 649744.2059334166 0.012109902068407135 0.01798125851555012 5.216943377514029e-06 5.282583876899756 0.09250806479386209 RNS(ph)LQHHQDDTK ddPTM_KYSE-520_SHP099_60min_R1 9 RNSLQHHQDDTK 12 1 Q6ZU80;H0YJH2 Q6ZU80 CEP128 Centrosomal protein of 128 kDa 1 RNS(1)LQHHQDDTK;RNS(1)LQHHQDDTK;RNS(1)LQHHQDDTK;RNS(1)LQHHQDDTK;RNS(1)LQHHQDDTK;RNS(1)LQHHQDDTK;RNS(1)LQHHQDDTK;RNS(1)LQHHQDDTK;RNS(1)LQHHQDDTK 186.17 6.2459e-08 9040079100.0 5066035.8 4303517.6 4332489.4 4179063.5 4285383.5 4209502.2 4143376.1 4244318.3 4860497.7 3590922.5 True False 4785012.695282008 4096770.154784389 4611768.598952131 4576240.438558747 4622618.800953258 4183229.135334246 4562228.991641897 4229595.75044864 3977953.8408560404 3559109.7203454277 1.34444090552443 1.1510659902855647 1.2957646606366882 1.2857823439381357 1.2988132325700292 1.1753582957617403 1.2818455597370884 1.188385883770433 1.1176822726527131 1.0 21.763084978305134 -7.922201983255431 1.1369993330365822 0.9994037387220178 1.2618287726683408 0.7006769714856154 0.055209371790100284 0.25805344511866957 0.746490829704428 0.05007704019428793 0.016167578921181782 1.196184076282289e-08 7.922201983255431 0.262425033946323 RNS(ph)LTGEEGQLAR ddPTM_KYSE-520_SHP099_60min_R1 4 RNSLTGEEGQLAR 13 1 Q9BX95 Q9BX95 SGPP1 Sphingosine-1-phosphate phosphatase 1 1 RNS(0.994)LT(0.006)GEEGQLAR;RNS(0.954)LT(0.046)GEEGQLAR;RNS(0.995)LT(0.005)GEEGQLAR;RNS(0.999)LT(0.001)GEEGQLAR 117.97 0.00012119999999999999 3383030000.0 5743370.0 5338570.0 5353870.0 5186270.0 5698400.0 5631860.0 5190950.0 5813050.0 7444110.0 5403170.0 True False 5424773.816975758 5082097.083843062 5698989.026694873 5679171.54149107 6146831.6605391465 5596709.472707609 5715701.884789921 5792885.886326068 6092447.274742026 5355302.117402657 1.0129725080023675 0.9489841977968367 1.064176941236493 1.0604764058102274 1.14780296718729 1.0450781954057216 1.0672977470712819 1.0817103796070502 1.137647725782628 1.0 22.35253653570658 -4.864420866709373 5.5860205418492095 1.0802523667693025 0.9816959071083898 0.4396435741975673 0.0426914119789722 0.1624857591419718 7.397079401566091 0.010776958901553661 0.023277268741853784 1.3664040270379918e-05 4.864420866709373 -0.09855645966091264 RNS(ph)LTPR ddPTM_KYSE-520_SHP099_60min_R1 2 RNSLTPR 7 1 D6RAU9;Q9NQ86-4;Q9NQ86 D6RAU9 TRIM36 E3 ubiquitin-protein ligase TRIM36 1 RNS(0.988)LT(0.012)PR;RNS(0.998)LT(0.002)PR 93.325 0.0043882 1898700000.0 395803.0 284028.0 242398.0 271522.0 233434.0 277346.0 210136.0 278664.0 325703.0 296744.0 True False 373847.0185762807 270382.86854528013 258023.36293051275 297327.3692439343 251803.92774222497 275614.980737725 231378.59760972718 277697.3796246667 266563.54550447315 294115.0790233382 1.2710909614621142 0.919309779842417 0.8772870938386619 1.0109218821124815 0.8561408295636694 0.9370991166211331 0.7866941007515196 0.9441793346563888 0.9063239681203872 1.0 18.1660212262732 -4.261853331690265 6.182470828025564 0.9096223852351608 1.2797729846038837 0.7426273069080569 0.06277610819057715 0.05821120403376113 11.761334128783444 0.014860326062192333 0.09076102914374284 5.472007302788148e-05 4.261853331690265 0.37015059936872285 RNS(ph)NSPPS(ph)PSSMNQR ddPTM_KYSE-520_SHP099_60min_R1 1 RNSNSPPSPSSMNQR 15 1 Q7Z5L9;Q7Z5L9-2;Q7Z5L9-3 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 2 RNS(0.944)NS(0.057)PPS(0.832)PS(0.164)S(0.002)MNQR 148.19 7.4758000000000005e-06 277360000.0 341420.0 365320.0 324840.0 293830.0 347630.0 339670.0 384940.0 457420.0 535100.0 409190.0 True False 322480.75199610385 347769.47884350026 345779.70616237697 321755.5148567895 374986.5032558653 337549.99353581143 423853.49185236386 455833.316782631 437939.32877327927 405564.89494500234 0.7951397076412017 0.857494036535535 0.8525878607152804 0.7933514928613877 0.9246029622625901 0.8322958859187893 1.0450941320003586 1.123946678975865 1.079825532810642 1.0 18.62957325478446 -6.805474961610017 4.9126628200399765 1.0770386485977628 0.8446712429084856 0.8499681548179789 0.04515335872842548 0.0678705575638164 3.6411103297141225 0.01856096845470673 0.01265253538986714 1.5650385458280315e-07 6.805474961610017 -0.23236740568927716 RNS(ph)PMAQT(ph)PPCHLPNIPGVTSPGTLIEDSK ddPTM_KYSE-520_SHP099_60min_R1 8 RNSPMAQTPPCHLPNIPGVTSPGTLIEDSK 30 1 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 RNS(0.995)PMAQT(0.995)PPCHLPNIPGVT(0.008)S(0.002)PGT(0.001)LIEDSK;RNS(1)PMAQT(1)PPCHLPNIPGVTSPGTLIEDSK;RNS(1)PMAQT(1)PPCHLPNIPGVTSPGTLIEDSK;RNS(1)PMAQT(0.889)PPCHLPNIPGVT(0.029)S(0.073)PGT(0.008)LIEDS(0.001)K;RNS(1)PMAQT(1)PPCHLPNIPGVTSPGTLIEDSK;RNS(1)PMAQT(1)PPCHLPNIPGVTSPGTLIEDSK;RNS(0.999)PMAQT(1)PPCHLPNIPGVT(0.001)SPGTLIEDSK;RNS(0.996)PMAQT(0.996)PPCHLPNIPGVT(0.004)S(0.004)PGTLIEDSK 192.18 1.3152999999999999e-15 7573080000.0 1240032.0 1392578.0 1306832.0 1726956.0 1544561.0 1551532.0 1497765.0 1584234.0 1759147.0 1703322.0 True False 1171244.953017492 1325676.4625778059 1391072.4817251295 1891085.3790117467 1666109.1633500648 1541848.3132764276 1649173.702977754 1578738.6620169957 1439730.249287103 1688231.8922444643 0.6937701854810655 0.7852454800005884 0.8239818760180698 1.1201573597200523 0.9868959181519857 0.9132917819877083 0.9768644405746989 0.9351432521027073 0.852803608260839 1.0 20.687081652761158 -5.039574924771546 6.466064439735988 0.9662854972963535 0.7539639039383512 0.6574119483610286 0.0683256625678351 0.12463518504836607 15.11785360790666 0.01935169188948714 0.03497933503491251 9.12903926916976e-06 5.039574924771546 -0.21232159335800227 RNS(ph)QTNKTEEVKEENLK ddPTM_KYSE-520_SHP099_60min_R1 1 RNSQTNKTEEVKEENLK 17 3 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 RNS(0.998)QT(0.002)NKTEEVKEENLK 161.47 5.8870000000000004e-08 761040000.0 538560.0 438900.0 450160.0 458960.0 503000.0 404780.0 356210.0 541640.0 750530.0 407800.0 True False 508685.00320725737 417814.5851976692 479178.03388146596 502579.4204086443 542583.2383214923 402253.6178744827 392219.18307458446 539761.1772597266 614252.6713216391 404187.2092635992 1.2585381020197197 1.0337155051464844 1.1855348781434594 1.2434322731892204 1.3424057612066473 0.9952160995083458 0.9703898938048544 1.335423696962439 1.5197231808516762 1.0 18.624664141963585 -7.3292832888240245 24.994763724526734 1.3206805893740423 1.1495377148776469 0.11761981212492323 0.16467740127600738 325.84383277156087 120043.74218542434 0.08959767565969487 0.04304133808139718 4.685076764754036e-08 7.3292832888240245 -0.17114287449639543 RNS(ph)S(ph)EASSGDFLDLK ddPTM_KYSE-520_SHP099_60min_R1 1 RNSSEASSGDFLDLK 15 1 Q9UK76-3;Q9UK76;J3KSH8;J3KT51;Q9UK76-2 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 2 RNS(1)S(1)EASSGDFLDLK 177.61 9.3429e-09 139330000.0 133670.0 130780.0 109140.0 108860.0 124300.0 156150.0 141710.0 157820.0 169760.0 174230.0 True False 126255.05863546139 124497.13249521801 116175.33903017426 119206.02167004766 134081.70282974458 155175.4099290985 156035.42975632177 157272.55925546482 138935.86330134913 172686.4577488889 0.7311231018419204 0.7209432292383625 0.6727530377576568 0.6903032422113289 0.7764459621073401 0.8985962880467789 0.9035765270211279 0.9107405485389125 0.8045556386557073 1.0 17.397795424098266 -6.096378894489787 2.764504350287938 0.8990244951188443 0.7033109779107296 0.8042268215715402 0.04668318112763841 0.11930604768649383 1.7761544531164204 0.016112689234716635 0.016532014928863418 8.009789549485296e-07 6.096378894489787 -0.1957135172081147 RNS(ph)SDSFCR ddPTM_KYSE-520_SHP099_60min_R1 2 RNSSDSFCR 9 1 Q96N46 Q96N46 TTC14 Tetratricopeptide repeat protein 14 1 RNS(0.705)S(0.232)DS(0.063)FCR;RNS(0.986)S(0.014)DSFCR 111.96 0.00059517 257670000.0 285493.0 290790.0 333553.0 287042.0 325509.0 337590.0 342990.0 374430.0 463890.0 402990.0 True False 269656.13417381386 276820.01191531116 355054.3600836699 314322.38537767594 351124.70640713815 335482.9755873476 377662.7764598185 373131.1897226194 379659.26971526165 399419.8221214756 0.6751195590182886 0.6930552681261819 0.8889252371047504 0.7869473871080966 0.8790868328521526 0.8399257047521219 0.9455283777702946 0.9341829550190401 0.9505268609322945 1.0 18.607546406033766 -2.625819092178888 0.23658300945398053 1.0013900473801027 9.153018555681362e-16 0.8294085728325016 0.043239976703039126 9.140501213736924 0.2346939146986965 0.06243785744577789 3.0559096100033774 0.002366905440002212 2.625819092178888 -1.0013900473801018 RNS(ph)SEAS(ph)SGDFLDLK ddPTM_KYSE-520_SHP099_60min_R1 1 RNSSEASSGDFLDLK 15 1 Q9UK76-3;Q9UK76;J3KSH8;J3KT51;Q9UK76-2 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 2 RNS(0.992)S(0.095)EAS(0.522)S(0.391)GDFLDLK 121.01 0.00013357 299650000.0 1195700.0 1176100.0 1040000.0 1045100.0 1033100.0 1314700.0 1266500.0 1334100.0 1418800.0 1173100.0 True False 1129372.1374311433 1119598.3906379105 1107040.0640588345 1144425.9897792276 1114399.092465075 1306494.4696367972 1394530.1798488568 1329472.3184812816 1161181.6850374301 1162707.2466579906 0.9713297484619077 0.9629237229371457 0.9521227869189237 0.9842769906773099 0.9584520055828589 1.1236658869995857 1.1993820317687043 1.1434282553090036 0.9986879228413296 1.0 20.14905646152513 -6.259596192178813 24.949605292967526 1.1086439145043028 0.9659243987647502 0.5344191901217679 0.05846725469680274 117.7261233021776 1593561.0405410416 0.020003647171825033 0.019037064053168618 5.500520756108481e-07 6.259596192178813 -0.14271951573955255 RNS(ph)SEASSGDFLDLK ddPTM_KYSE-520_SHP099_60min_R1 62 RNSSEASSGDFLDLK 15 1 Q9UK76-3;Q9UK76;J3KSH8;J3KT51;Q9UK76-2 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 RNS(0.795)S(0.205)EASSGDFLDLK;RNS(0.756)S(0.24)EAS(0.002)S(0.002)GDFLDLK;RNS(0.904)S(0.096)EASSGDFLDLK;RNS(0.977)S(0.012)EAS(0.004)S(0.006)GDFLDLK;RNS(0.9)S(0.07)EAS(0.024)S(0.005)GDFLDLK;RNS(0.612)S(0.383)EAS(0.005)SGDFLDLK;RNS(0.963)S(0.037)EASSGDFLDLK;RNS(0.904)S(0.096)EASSGDFLDLK;RNS(0.859)S(0.085)EAS(0.056)S(0.001)GDFLDLK;RNS(0.906)S(0.094)EASSGDFLDLK;RNS(0.997)S(0.002)EASSGDFLDLK;RNS(0.885)S(0.115)EASSGDFLDLK;RNS(0.979)S(0.021)EASSGDFLDLK;RNS(0.908)S(0.092)EASSGDFLDLK;RNS(0.882)S(0.118)EASSGDFLDLK;RNS(0.478)S(0.478)EAS(0.038)S(0.006)GDFLDLK;RNS(0.497)S(0.497)EAS(0.004)S(0.003)GDFLDLK;RNS(0.887)S(0.11)EAS(0.001)S(0.001)GDFLDLK;RNS(0.487)S(0.487)EAS(0.024)S(0.003)GDFLDLK;RNS(0.883)S(0.115)EAS(0.001)S(0.001)GDFLDLK;RNS(0.447)S(0.447)EAS(0.053)S(0.053)GDFLDLK;RNS(0.957)S(0.043)EASSGDFLDLK;RNS(0.999)S(0.001)EASSGDFLDLK;RNS(0.743)S(0.252)EAS(0.004)SGDFLDLK;RNS(0.895)S(0.105)EASSGDFLDLK;RNS(0.454)S(0.454)EAS(0.04)S(0.053)GDFLDLK;RNS(0.906)S(0.094)EASSGDFLDLK;RNS(0.793)S(0.142)EAS(0.027)S(0.037)GDFLDLK;RNS(0.495)S(0.495)EAS(0.008)S(0.002)GDFLDLK;RNS(0.854)S(0.143)EAS(0.002)SGDFLDLK;RNS(0.797)S(0.203)EAS(0.001)SGDFLDLK;RNS(0.45)S(0.45)EAS(0.088)S(0.013)GDFLDLK;RNS(0.581)S(0.413)EAS(0.003)S(0.003)GDFLDLK;RNS(0.893)S(0.106)EAS(0.001)SGDFLDLK;RNS(0.449)S(0.449)EAS(0.051)S(0.051)GDFLDLK;RNS(0.981)S(0.019)EASSGDFLDLK;RNS(0.974)S(0.026)EASSGDFLDLK;RNS(0.852)S(0.148)EASSGDFLDLK;RNS(0.869)S(0.131)EASSGDFLDLK;RNS(0.98)S(0.02)EASSGDFLDLK;RNS(0.873)S(0.122)EAS(0.002)S(0.003)GDFLDLK;RNS(0.911)S(0.089)EASSGDFLDLK;RNS(0.9)S(0.098)EAS(0.001)S(0.001)GDFLDLK;RNS(0.882)S(0.099)EAS(0.017)S(0.002)GDFLDLK;RNS(0.498)S(0.498)EAS(0.004)SGDFLDLK;RNS(0.836)S(0.144)EAS(0.009)S(0.012)GDFLDLK;RNS(0.568)S(0.416)EAS(0.007)S(0.009)GDFLDLK;RNS(0.909)S(0.076)EAS(0.013)S(0.002)GDFLDLK;RNS(0.499)S(0.374)EAS(0.116)S(0.011)GDFLDLK;RNS(0.998)S(0.001)EASSGDFLDLK;RNS(0.88)S(0.12)EASSGDFLDLK;RNS(0.498)S(0.498)EAS(0.004)SGDFLDLK;RNS(0.323)S(0.323)EAS(0.323)S(0.03)GDFLDLK;RNS(0.627)S(0.197)EAS(0.154)S(0.022)GDFLDLK;RNS(0.564)S(0.311)EAS(0.11)S(0.016)GDFLDLK;RNS(0.999)S(0.001)EASSGDFLDLK;RNS(0.25)S(0.25)EAS(0.25)S(0.25)GDFLDLK;RNS(0.495)S(0.495)EAS(0.009)S(0.001)GDFLDLK;RNS(0.543)S(0.381)EAS(0.05)S(0.026)GDFLDLK;RNS(0.648)S(0.243)EAS(0.064)S(0.045)GDFLDLK;RNS(0.872)S(0.128)EASSGDFLDLK;RNS(0.994)S(0.006)EASSGDFLDLK 242.34 5.4113e-19 485626905800.0 230295192.0 190068312.5 179319008.2 204473500.4 210115264.5 210910108.7 218995585.5 226933711.6 231038331.5 214470137.4 True False 217520258.6176764 180937145.46914658 190878198.3891295 223906600.40081632 226650140.4238309 209593740.47847068 241133796.4732893 226146531.52118602 189087594.50197783 212570098.837878 1.0232871876470913 0.8511881325658267 0.8979541310497655 1.0533306501004378 1.0662371691170516 0.9859982265818237 1.1343730740662457 1.0638680263947304 0.8895305385645528 1.0 27.663363433615196 -5.261488526350537 24.999999976662853 1.0346037332076985 0.9168476439666068 0.29410668705103504 0.07263976366335861 4.888358339495769 2487076.2977645313 0.019968141735235454 0.031884898780309985 5.47660569445047e-06 5.261488526350537 -0.11775608924109171 RNS(ph)SFSTAR ddPTM_KYSE-520_SHP099_60min_R1 3 RNSSFSTAR 9 1 H0Y507;Q5TCZ1-2;Q5TCZ1-3;Q5TCZ1 H0Y507 SH3PXD2A SH3 and PX domain-containing protein 2A 1 RNS(0.982)S(0.018)FSTAR;RNS(0.999)S(0.001)FSTAR;RNS(0.976)S(0.024)FSTAR 134.99 0.00032127 1277010000.0 316021.0 309835.0 337761.0 227307.0 244911.0 282166.0 251175.0 248610.0 345533.0 368662.0 True False 298490.68515775475 294950.06152818335 359533.6144967074 248910.18893765833 264184.10234702786 280404.89732983685 276566.2202317704 247747.6299360103 282792.91737809277 365395.9414946958 0.816896553193073 0.8072067257278635 0.9839562339581336 0.6812067696194475 0.7230077632125611 0.7674001418373918 0.7568946143748703 0.678025127817701 0.7739355730698445 1.0 18.479101084269775 -5.278122921829797 24.988184368954844 0.7527807374874805 0.8631385450895276 0.17238826200899104 0.09656957342045457 1161.4940450075014 1739653.822873469 0.025664664570700043 0.03818829526282253 5.270806564679263e-06 5.278122921829797 0.11035780760204705 RNS(ph)SIVGR ddPTM_KYSE-520_SHP099_60min_R1 8 RNSSIVGR 8 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0U1RQT6 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 RNS(0.786)S(0.214)IVGR;RNS(0.769)S(0.231)IVGR;RNS(0.993)S(0.007)IVGR;RNS(0.975)S(0.025)IVGR;RNS(0.997)S(0.003)IVGR;RNS(0.996)S(0.004)IVGR;RNS(0.999)S(0.001)IVGR;RNS(0.98)S(0.02)IVGR 136.49 0.00045744 11415340000.0 2581696.0 2321872.0 1981207.0 1958724.0 1982680.0 2291616.0 2439399.0 2042683.0 2492635.0 2906060.0 True False 2438484.1763966153 2210325.783919077 2108918.7732632826 2144880.540048156 2138705.6360939452 2277313.174512207 2685997.257159989 2035597.4094387973 2040035.3182148803 2880314.569280469 0.8466034239467715 0.7673904119685226 0.7321834898714245 0.7446688507304147 0.7425250210181783 0.7906473823382084 0.9325360798459515 0.7067274634337283 0.7082682356894446 1.0 21.457794951393844 -6.524158408574388 24.990979630686457 0.8194647184067557 0.7638764295700979 0.10967132309388916 0.08895944409392947 123.5478269624208 2412683.756401998 0.03375100929734561 0.02635780549735365 2.991173409434236e-07 6.524158408574388 -0.055588288836657784 RNS(ph)SS(ph)PVS(ph)PASVPGQR ddPTM_KYSE-520_SHP099_60min_R1 1 RNSSSPVSPASVPGQR 16 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 3 RNS(0.92)S(0.082)S(0.998)PVS(0.996)PAS(0.004)VPGQR 166.52 3.1422e-06 0.0 227800.0 213890.0 204680.0 184220.0 227420.0 234940.0 212750.0 230890.0 297060.0 218870.0 True False 215163.47989195836 203614.40334456443 217874.0002995789 201728.2134122373 245316.66015720426 233473.65231343184 234256.84623990895 230089.09648013092 243121.39227320216 216930.9820782835 0.9918522371982472 0.9386137535259323 1.0043470887019499 0.9299188685710186 1.1308511942691397 1.076257757544188 1.0798680944309424 1.060655763763145 1.1207315337993877 1.0 17.72687658783742 -5.757546718472695 24.999994188762702 1.0810937345061993 0.9669397564322202 0.6627259458938598 0.03906228790356748 55.83739432402633 358603.9838863135 0.010869671702318654 0.013503400485821203 1.7476452524109552e-06 5.757546718472695 -0.11415397807397909 RNS(ph)SS(ph)PVSPASVPGQR ddPTM_KYSE-520_SHP099_60min_R1 2 RNSSSPVSPASVPGQR 16 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 2 RNS(0.716)S(0.312)S(0.859)PVS(0.113)PASVPGQR;RNS(0.974)S(0.117)S(0.838)PVS(0.071)PASVPGQR 185.71 1.5240000000000001e-09 680100000.0 1080300.0 940690.0 964380.0 971410.0 971020.0 1048800.0 902700.0 1006160.0 1255990.0 967760.0 True False 1020373.6054753405 895497.8403955229 1026545.4778625573 1063732.514334933 1047433.7496519584 1042254.0501673932 993953.7255030114 1002669.8657995106 1027933.8769313246 959186.3993058867 1.0637907357878842 0.9336014783399224 1.0702252227569269 1.1089945761373396 1.092002295288936 1.0866021984065017 1.036246683879467 1.0453336979393064 1.0716726985236518 1.0 19.871451676774164 -4.813928830494785 24.996549838939966 1.0679433731846975 0.9986957765906861 0.2789090384526145 0.04151880039481899 97.21783358585573 46296.679532945185 0.010507057574925639 0.021872224258363774 1.5348684869868492e-05 4.813928830494785 -0.06924759659401136 RNS(ph)SSPVS(ph)PASVPGQR ddPTM_KYSE-520_SHP099_60min_R1 2 RNSSSPVSPASVPGQR 16 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 2 RNS(0.863)S(0.127)S(0.07)PVS(0.939)PASVPGQR;RNS(0.932)S(0.061)S(0.065)PVS(0.88)PAS(0.061)VPGQR 234.51 6.552500000000001e-23 1426230000.0 1878030.0 1629210.0 1537530.0 1446280.0 1638370.0 1590530.0 1355770.0 1555220.0 1920640.0 1543290.0 True False 1773851.9321400123 1550940.3061059336 1636641.6439349796 1583734.0163600612 1767300.3979498656 1580602.9122928544 1492824.4626401006 1549825.304811075 1571900.1913943398 1529617.6512614503 1.159670150692329 1.0139398593020281 1.0699678070433278 1.0353790145229966 1.1553870318457702 1.0333320297326312 0.9759461532161277 1.0132109181225517 1.0276425550515973 1.0 20.544739646055962 -6.513811302078292 24.81469133390402 1.0052062748403063 1.0805518685424864 0.43364384279623613 0.044609969860367416 409.9727824277812 1121969.555079725 0.016020690959130987 0.013107525839600476 3.063294124502025e-07 6.513811302078292 0.07534559370218008 RNS(ph)SSSSSPSERPR ddPTM_KYSE-520_SHP099_60min_R1 8 RNSSSSSSPSERPR 14 2 G3V1D0;B7WPE2;H0Y3M3;Q32P44;Q32P44-2 G3V1D0 EML3 Echinoderm microtubule-associated protein-like 3 1 RNS(0.861)S(0.108)S(0.023)S(0.005)S(0.003)S(0.001)PSERPR;RNS(0.433)S(0.099)S(0.27)S(0.18)S(0.006)S(0.011)PSERPR;RNS(0.964)S(0.024)S(0.001)S(0.006)S(0.004)S(0.001)PSERPR;RNS(0.866)S(0.046)S(0.022)S(0.041)S(0.022)S(0.002)PSERPR;RNS(0.986)S(0.014)SSSSPSERPR;RNS(0.609)S(0.087)S(0.087)S(0.087)S(0.117)S(0.011)PS(0.002)ERPR;RNS(0.93)S(0.048)S(0.016)S(0.003)S(0.001)S(0.001)PSERPR;RNS(0.208)S(0.047)S(0.208)S(0.208)S(0.13)S(0.199)PSERPR 199.08 2.9004999999999998e-11 13752510000.0 3761886.0 3163340.0 2907332.0 2860608.0 2826869.0 3175398.0 2964069.0 3052840.0 3505943.0 3019112.0 True False 3553206.684446184 3011368.398129855 3094743.2726156693 3132479.3242468443 3049327.507615584 3155579.16322792 3263706.0210457398 3042250.4105782155 2869352.1288308324 2992365.0165135893 1.187424216242854 1.006350622838923 1.0342131576652909 1.0468239359035492 1.0190359434051806 1.0545435285513702 1.0906777759513746 1.0166708920166256 0.9588910821360692 1.0 21.51285473899966 -4.256304930100657 24.961326630760894 1.0294870629594153 1.1874242832280655 0.6742737344249042 0.03370028036893684 338.75741054525685 1646830.2801756333 0.008677492828012959 0.0706835251580898 5.5423643166886104e-05 4.256304930100657 0.1579372202686502 RNS(ph)TDSRPVSVTYR ddPTM_KYSE-520_SHP099_60min_R1 7 RNSTDSRPVSVTYR 14 2 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 RNS(0.921)T(0.079)DSRPVSVTYR;RNS(0.918)T(0.081)DS(0.001)RPVSVTYR;RNS(0.821)T(0.179)DSRPVSVTYR;RNS(0.979)T(0.021)DSRPVSVTYR;RNS(0.968)T(0.032)DSRPVSVTYR;RNS(0.873)T(0.126)DS(0.001)RPVSVTYR;RNS(0.498)T(0.498)DS(0.003)RPVSVTYR 195.77 4.8608e-11 13959100000.0 5439370.0 5083620.0 4349980.0 4272460.0 4388480.0 4640060.0 4679780.0 4661540.0 5891620.0 4551310.0 True False 5137637.302984726 4839395.264530814 4630386.671014083 4678513.313838061 4733828.40896442 4611099.664397135 5152857.832651472 4645370.205751612 4821850.323653944 4510988.9342656005 1.1389159622979976 1.0728014045369585 1.0264681954419204 1.0371369520106646 1.0493992510170274 1.0221926348280508 1.1422900627199983 1.029789758619279 1.068912026590673 1.0 22.105012316365762 -4.3179974835172805 3.2515353981083326 1.050283940114099 1.1461943135046495 0.3621624216919631 0.03653721259784604 0.3131920455846068 5.4214970007779755 0.009108086795216182 0.06936055059578376 4.8084213464082086e-05 4.3179974835172805 0.09591037339055042 RNS(ph)TIPTK ddPTM_KYSE-520_SHP099_60min_R1 4 RNSTIPTK 8 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 1 RNS(0.981)T(0.016)IPT(0.003)K;RNS(0.866)T(0.13)IPT(0.003)K;RNS(0.715)T(0.285)IPTK;RNS(0.718)T(0.282)IPTK 76.332 0.01621 2645480000.0 4725990.0 4192400.0 4131800.0 3981170.0 4377700.0 4097400.0 3980600.0 4130000.0 4921740.0 4412660.0 True False 4463829.913672505 3990990.8110793033 4398142.439113741 4359539.19981759 4722200.084294222 4071826.6067466396 4382997.894912249 4115673.993949247 4028076.082968792 4373567.265397537 1.0206382211127978 0.9125253068941975 1.0056190226935884 0.9967925346224963 1.0797136062488333 0.9310081129794925 1.0021562786033555 0.9410336560983822 0.9210047173248767 1.0 22.06037905195314 -9.348463162537097 6.560157257038709 0.9999999982590815 0.9794212615512219 0.015651278218316134 0.04996734891614504 62529097.78320024 0.0 0.048346783777210314 0.012086695944302582 4.4826707102147414e-10 9.348463162537097 -0.02057873670785959 RNS(ph)TIVLR ddPTM_KYSE-520_SHP099_60min_R1 5 RNSTIVLR 8 1 H0Y6F6;A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-5;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 H0Y6F6 NAV1 Neuron navigator 1 1 RNS(0.981)T(0.019)IVLR;RNS(0.998)T(0.002)IVLR;RNS(0.5)T(0.5)IVLR;RNS(0.999)T(0.001)IVLR;RNS(0.903)T(0.097)IVLR 168.3 9.703e-05 4498350000.0 4204920.0 3624051.0 3219118.0 3176122.0 2809237.0 2960481.0 3086484.0 3078804.0 3633530.0 3423816.0 True False 3971664.7052998 3449946.150148548 3426627.497050912 3477979.6799440966 3030307.969527937 2942003.5399443316 3398495.9239010084 3068124.3475222522 2973772.545837365 3393483.6539285397 1.1703797956126638 1.0166385054351577 1.009766908139959 1.0248994940399192 0.892978507799746 0.8669567441524162 1.0014770278815595 0.9041223298572167 0.876318511920549 1.0 21.694335633147777 -1.3823624766014795 0.5270250274578614 0.9214847338724654 6.910825851173773 0.657207710402979 0.05173378492503566 47.43476624030811 0.7157936128610818 0.027172438340747562 308.09356614839845 0.041460785269687744 1.3823624766014795 5.989341117301308 RNS(ph)TTIMSR ddPTM_KYSE-520_SHP099_60min_R1 10 RNSTTIMSR 9 1 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 RNS(0.949)T(0.05)TIMSR;RNS(0.888)T(0.111)TIMSR;RNS(0.966)T(0.034)TIMSR;RNS(0.958)T(0.042)T(0.001)IMSR;RNS(0.976)T(0.024)TIMSR;RNS(0.996)T(0.004)TIMSR;RNS(0.951)T(0.042)T(0.006)IMSR;RNS(0.981)T(0.018)T(0.001)IMSR;RNS(0.99)T(0.01)TIMSR;RNS(0.964)T(0.032)T(0.004)IMSR 175.98 3.2568000000000004e-05 31349350000.0 5542207.0 5186134.0 4870047.0 4675196.0 5006668.0 5108779.0 4730654.0 5056303.0 5972684.0 5033287.0 True False 5234769.729594258 4936984.338094165 5183978.021970711 5119525.222191066 5400664.287555842 5076893.215255653 5208874.6730538625 5038763.865042994 4888195.1447110865 4988695.993018032 1.0493262642022325 0.9896342340771535 1.0391449046456203 1.0262251356579228 1.0825803566932888 1.0176794140915897 1.0441355176470932 1.0100362644055751 0.9798542848777311 1.0 22.25023132471408 -7.491610242205995 4.077642490980652 0.9904715156300087 1.034526031927514 0.39558067960025367 0.022869850455192176 0.22128755773187317 8.15384706333509 0.015080408066505398 0.006051110832450659 3.2239608385772656e-08 7.491610242205995 0.04405451629750534 RNS(ph)VERPAEPVAGAATPSLVEQQK ddPTM_KYSE-520_SHP099_60min_R1 17 RNSVERPAEPVAGAATPSLVEQQK 24 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(0.999)VERPAEPVAGAAT(0.001)PSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(0.999)VERPAEPVAGAAT(0.001)PSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK;RNS(1)VERPAEPVAGAATPSLVEQQK 255.39 1.2828e-29 112645600000.0 10782640.0 10716940.0 10808210.0 10224100.0 10567980.0 11051630.0 11803040.0 14126310.0 16094040.0 13180380.0 True False 10184505.464540072 10202082.115945099 11504924.510347445 11195795.390012257 11399619.902418993 10982652.677776001 12996206.469769644 14077309.127715524 13171768.033732597 13063612.087380482 0.779608686817818 0.7809541532391615 0.8806847932557078 0.8570214206549699 0.8726238827491737 0.8407056642768275 0.9948402006152683 1.0775969948858386 1.00827917620553 1.0 23.639050521283075 -6.812587996701568 3.7946841370148037 1.0330380950411207 0.8363126932026108 0.8565684939538105 0.03721505787908156 0.08462541457611307 2.4939279698011605 0.01743975221673628 0.01175867512992658 1.5396145379197174e-07 6.812587996701568 -0.19672540183850984 RNS(ph)VTPLASPEPTK ddPTM_KYSE-520_SHP099_60min_R1 7 RNSVTPLASPEPTK 14 1 Q5W015;Q5VX20;A0A1W2PR17;Q16875-3;Q16875-2;Q16875;Q16875-4;Q9H178 Q5W015 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 RNS(0.979)VT(0.021)PLASPEPTK;RNS(0.993)VT(0.007)PLASPEPTK;RNS(1)VTPLASPEPTK;RNS(0.977)VT(0.022)PLASPEPTK;RNS(0.938)VT(0.061)PLAS(0.001)PEPTK;RNS(1)VTPLASPEPTK;RNS(0.995)VT(0.005)PLASPEPTK 223.15 2.1516e-14 5396470000.0 5710130.0 4731800.0 4149440.0 3807880.0 4131680.0 5723310.0 5190960.0 6094560.0 6629580.0 5808310.0 True False 5393377.706038055 4504477.225423403 4416919.541738744 4169779.770319134 4456819.7099565435 5687588.699335958 5715712.895687503 6073419.393840993 5425815.390111681 5756852.892196803 0.9368621722727316 0.7824548081694169 0.7672455114713304 0.7243158455501117 0.7741764108646226 0.9879683927732927 0.9928537349694893 1.0549895068663788 0.9424967932507305 1.0 22.456848916126173 -6.274300211835811 9.199651109658884 0.9990806723685908 0.7904667488413062 0.7478899256602078 0.057589064776823407 0.122748015197455 79.22857009538203 0.02054807916113057 0.01870516551831361 5.31740559459997e-07 6.274300211835811 -0.20861392352728458 RNS(ph)YPR ddPTM_KYSE-520_SHP099_60min_R1 8 RNSYPR 6 1 Q14134-2;Q14134 Q14134-2 TRIM29 Tripartite motif-containing protein 29 1 RNS(1)YPR;RNS(1)YPR;RNS(1)YPR;RNS(1)YPR;RNS(1)YPR;RNS(1)YPR;RNS(1)YPR;RNS(1)YPR 82.45200000000001 0.016702 108008100000.0 1015276.0 823146.0 790947.0 661639.0 765825.0 789201.0 661611.0 653906.0 853415.0 779328.0 True False 958956.616377472 783600.8305926642 841932.7091799444 724520.9716309814 826091.0705518022 784275.3038197524 728493.096581116 651637.7527088071 698456.3488414278 772423.7602280087 1.2414903136775612 1.014470127590788 1.0899881030736516 0.937983797154444 1.069479103423685 1.0153433182690357 0.9431262139917537 0.8436272759352363 0.9042398548631561 1.0 19.559033017591112 -1.000000000006047 0.3761462472296478 0.9264846608870352 4.787979957715309 0.6126309839637685 0.0658774398149356 46.838954790944335 0.6435559167025922 0.052901384598313096 131.37350994927044 0.09999999999860765 1.000000000006047 3.8614952968282736 RNSFS(ph)ENEK ddPTM_KYSE-520_SHP099_60min_R1 1 RNSFSENEK 9 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 RNS(0.29)FS(0.71)ENEK 202.3 1.6222e-06 9996200000.0 9268200.0 8295100.0 7582300.0 8004400.0 8860700.0 8196600.0 8606900.0 8107700.0 10049000.0 8431400.0 True False 8754074.47030135 7896590.944801051 8071067.190108946 8765135.769389378 9557986.679513402 8145441.979025615 9476969.447249223 8079576.281051407 8224354.91467517 8356704.355529935 1.047551055759016 0.9449408054714284 0.9658194004156707 1.048874699460819 1.1437507267070584 0.9747194147936418 1.1340558483414538 0.9668376356649326 0.9841624837706284 1.0 22.9945026662534 -5.26635191841191 24.193976285786604 1.0406902542202754 0.9819874578061318 0.11189511437365052 0.06324197500630978 491.22398455462604 2419249.4799170736 0.0176540908872363 0.027128841246264475 5.415618730045269e-06 5.26635191841191 -0.058702796414143554 RNSFT(ph)PLSSSNTIR ddPTM_KYSE-520_SHP099_60min_R1 3 RNSFTPLSSSNTIR 14 1 O60825 O60825 PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 RNSFT(0.922)PLS(0.078)SSNTIR;RNS(0.003)FT(0.78)PLS(0.212)S(0.004)S(0.001)NTIR;RNS(0.015)FT(0.47)PLS(0.004)S(0.47)S(0.042)NTIR 263.21 1.2515e-24 11730900000.0 4805500.0 4413600.0 4328300.0 4244200.0 3879500.0 4247100.0 4308100.0 4367200.0 5389500.0 4282300.0 True False 4538929.335473245 4201564.031051338 4607309.143524861 4647567.491934737 4184794.5786644714 4220592.273518249 4743604.791004231 4352051.2025121385 4410902.658238815 4244362.153578984 1.069401990507778 0.9899164772045767 1.0855127288419129 1.0949978639348101 0.9859654825014678 0.9943996578989636 1.117624891411368 1.0253722573702502 1.0392380524172282 1.0 22.017116329931568 -5.751544943559427 24.9941691728583 1.0312598874195367 1.0567797231916667 0.1148322698203369 0.04342913974741945 641.5501330620558 1620603.157742141 0.013435504038475626 0.01713127897078037 1.7719646614559089e-06 5.751544943559427 0.025519835772130017 RNSLT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RNSLTPR 7 1 D6RAU9;Q9NQ86-4;Q9NQ86 D6RAU9 TRIM36 E3 ubiquitin-protein ligase TRIM36 1 RNS(0.057)LT(0.943)PR;RNS(0.162)LT(0.838)PR 70.908 0.031948000000000004 3604920000.0 2792500.0 2486600.0 2342300.0 2294400.0 2315700.0 2364700.0 2228000.0 2299200.0 2308600.0 2080400.0 True False 2637594.4582892596 2367140.003537309 2493288.405812507 2512459.0861634854 2497932.4154693396 2349941.030159073 2453227.983184568 2291224.6118373144 1889416.4350700658 2061969.2745267074 1.2791628327704727 1.1479996490639506 1.2091782533397848 1.2184755210478007 1.211430473930171 1.1396586065514798 1.1897500188249255 1.1111827126343718 0.9163164836700836 1.0 20.975591404543188 -7.574185677670564 3.282201757300825 0.9591037052533955 1.195704000191198 0.8355712428514299 0.04221135684527533 0.09040125411599031 1.926874191503161 0.03225559936937122 0.010866582170481935 2.6657187231065948e-08 7.574185677670564 0.23660029493780255 RNSS(ph)EASS(ph)GDFLDLK ddPTM_KYSE-520_SHP099_60min_R1 1 RNSSEASSGDFLDLK 15 1 Q9UK76-3;Q9UK76;J3KSH8;J3KT51;Q9UK76-2 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 2 RNS(0.443)S(0.557)EAS(0.207)S(0.793)GDFLDLK 104.88 0.00079731 238880000.0 549670.0 584440.0 470080.0 554820.0 592580.0 594550.0 616670.0 711160.0 743100.0 621880.0 True False 519178.70936002146 556362.6251376757 500382.10895459383 607549.9259872851 639212.6746810128 590839.1929128752 679009.0217192223 708693.1519459924 608171.7720265823 616370.6270153186 0.8423157863217229 0.9026429890596465 0.8118201728359743 0.9856892904343181 1.0370589490552191 0.9585777891038132 1.1016245615194558 1.1497841085934475 0.9866981737458222 1.0 19.23343858666421 -5.449167349014665 3.4522998641932965 1.0445999054387414 0.8577098537102202 0.6832269029263556 0.05655770088905726 0.14523317585284273 3.339976753087209 0.01743090653458178 0.026205897673399883 3.5549430765089004e-06 5.449167349014665 -0.18689005172852113 RNSS(ph)EASSGDFLDLK ddPTM_KYSE-520_SHP099_60min_R1 15 RNSSEASSGDFLDLK 15 1 Q9UK76-3;Q9UK76;J3KSH8;J3KT51;Q9UK76-2 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 RNS(0.225)S(0.768)EAS(0.001)S(0.006)GDFLDLK;RNS(0.338)S(0.471)EAS(0.084)S(0.107)GDFLDLK;RNS(0.092)S(0.723)EAS(0.092)S(0.092)GDFLDLK;RNS(0.396)S(0.502)EAS(0.046)S(0.057)GDFLDLK;RNS(0.382)S(0.618)EASSGDFLDLK;RNS(0.265)S(0.706)EAS(0.025)S(0.005)GDFLDLK;RNS(0.103)S(0.859)EAS(0.019)S(0.019)GDFLDLK;RNS(0.208)S(0.649)EAS(0.126)S(0.017)GDFLDLK;RNS(0.322)S(0.56)EAS(0.104)S(0.014)GDFLDLK;RNS(0.105)S(0.875)EAS(0.009)S(0.011)GDFLDLK;RNS(0.102)S(0.784)EAS(0.099)S(0.016)GDFLDLK;RNS(0.071)S(0.718)EAS(0.186)S(0.025)GDFLDLK;RNS(0.078)S(0.787)EAS(0.056)S(0.078)GDFLDLK;RNS(0.273)S(0.496)EAS(0.175)S(0.056)GDFLDLK;RNS(0.076)S(0.837)EAS(0.076)S(0.011)GDFLDLK 152.04 1.5852e-05 13988064000.0 14191715.0 11884260.9 11523403.0 12079730.0 12015438.0 12562657.0 12484569.3 13728741.0 13837995.0 12193353.0 True False 13404472.278467545 11313323.167724703 12266219.995476704 13227783.907296728 12960984.612109559 12484248.79778199 13746631.402498657 13681119.201783245 11325363.935466249 12085329.378705088 1.1091524159934647 0.936120383086894 1.0149677854118195 1.0945323451924032 1.0724560503040501 1.033008568205002 1.1374643563063214 1.1320435523991603 0.9371166958363639 1.0 23.526753457674882 -5.194715158549016 8.864226875781744 1.0664267383506092 1.011459621097758 0.04654297030913623 0.06903512429121098 0.9323972299252761 117.39823423482743 0.01821328827678788 0.03161062945587772 6.3868224244499105e-06 5.194715158549016 -0.054967117252851194 RNSS(ph)IVGR ddPTM_KYSE-520_SHP099_60min_R1 3 RNSSIVGR 8 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0U1RQT6 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 RNS(0.029)S(0.971)IVGR;RNS(0.013)S(0.987)IVGR;RNS(0.035)S(0.965)IVGR 140.48 0.00057112 634500000.0 182798.0 165242.0 178936.0 182232.0 200740.0 173792.0 167802.0 189249.0 196443.0 183718.0 True False 172657.83054122125 157303.5262867014 190470.50086772264 199551.27448995115 216537.09594563884 172707.29966313072 184765.06374970224 188592.53939004857 160773.9031250408 182090.40145044128 0.9481984177414906 0.8638759925493052 1.0460216428242768 1.0958912325988919 1.1891735875192342 0.9484700911603827 1.014688650680958 1.035708295922325 0.8829345305650166 1.0 17.474295349827777 -4.769547297709864 24.998835270471286 1.0329498681400386 0.9060371989588234 0.26642404609178616 0.07947433228143183 206.96258190762327 638126.2487801869 0.02166267566884766 0.04637328237955506 1.700014800045619e-05 4.769547297709864 -0.12691266918121524 RNSS(ph)S(ph)PVSPASVPGQR ddPTM_KYSE-520_SHP099_60min_R1 1 RNSSSPVSPASVPGQR 16 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 2 RNS(0.468)S(0.473)S(0.737)PVS(0.313)PAS(0.009)VPGQR 136.24 2.2817e-05 506750000.0 792430.0 711030.0 711020.0 631390.0 647360.0 692910.0 676950.0 679530.0 917890.0 726400.0 True False 748472.3282299585 676871.0515222116 756853.4868722241 691397.1157656743 698303.5490254494 688585.2916680857 745382.7123953286 677172.869033494 751224.3141239116 719964.6611306492 1.0395959255202059 0.940144826635293 1.0512369949986766 0.9603209061398768 0.9699136453847851 0.9564154032042566 1.0353045817898372 0.9405640381988278 1.0434183157603478 1.0 19.457566569237905 -7.790646873460319 24.99978081865723 1.0217091226241255 0.9864608026628228 0.1065111132398342 0.0405698250553684 522.2071615801055 446963.3316062108 0.03585397663889991 0.009263567376321882 1.619396239874306e-08 7.790646873460319 -0.03524831996130273 RNSSEAS(ph)SGDFLDLK ddPTM_KYSE-520_SHP099_60min_R1 2 RNSSEASSGDFLDLK 15 1 Q9UK76-3;Q9UK76;J3KSH8;J3KT51;Q9UK76-2 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 RNS(0.261)S(0.001)EAS(0.729)S(0.009)GDFLDLK;RNSSEAS(0.998)S(0.002)GDFLDLK 290.32 4.380199999999999e-33 45435600000.0 12496400.0 10696900.0 9498700.0 9700000.0 10463600.0 10590200.0 10404300.0 10874800.0 10961400.0 10265100.0 True False 11803199.781044213 10183004.867625747 10111001.400457365 10621885.083588656 11287025.790259968 10524102.63356477 11456068.18018278 10837077.856997397 8971086.074407453 10174159.200126944 1.1601154993620448 1.0008694249151018 0.9937923322775615 1.0440061802312004 1.109381676484789 1.0343953172497498 1.1259965521317812 1.0651570949334253 0.8817520836803419 1.0 23.278406238267856 -7.743737872540271 24.98479498698793 0.9408760671636947 1.063652815198465 0.4385501727610497 0.05686889037607462 191.82810214665676 270757.9839035044 0.03822909721911416 0.014380432898577562 1.8041063181696858e-08 7.743737872540271 0.12277674803477034 RNST(ph)DSRPVSVTYR ddPTM_KYSE-520_SHP099_60min_R1 1 RNSTDSRPVSVTYR 14 2 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 RNS(0.389)T(0.609)DS(0.002)RPVSVTYR 107.34 0.0010257 2781600000.0 968950.0 1019600.0 880350.0 796830.0 889410.0 825000.0 878060.0 915080.0 983200.0 873100.0 True False 915200.4119460635 970616.8855491986 937098.7696098023 872560.4836243239 959401.5069493398 819850.8689817891 966822.8738397852 911905.8010612783 804675.6644550327 865365.0132615215 1.0575888762785945 1.1216271407726406 1.082894218334434 1.0083149540974425 1.1086668541560272 0.9474046863667487 1.117242850153918 1.0537816841292749 0.9298684972509422 1.0 19.722949268163518 -6.400668764452069 0.3462557636627138 0.9850912329262542 1.1027922042061908 0.23095645192581504 0.05744905389568202 2.7886169222058292 0.7326355965945527 0.06901018882391288 0.12090241628991591 3.974946022378983e-07 6.400668764452069 0.11770097127993662 RNT(ph)FVGTPFWMAPEVIQQSAYDSK ddPTM_KYSE-520_SHP099_60min_R1 1 RNTFVGTPFWMAPEVIQQSAYDSK 24 1 Q8NBY1;B4E0Y9;Q9P289-3;Q9P289;Q9P289-2 Q8NBY1 STK26 Serine/threonine-protein kinase 26 1 RNT(0.996)FVGT(0.004)PFWMAPEVIQQSAYDSK 139.16 2.462e-06 71598000.0 48801.0 52678.0 44651.0 44404.0 42127.0 45715.0 37210.0 52145.0 54605.0 52893.0 True False 46093.91124761833 50147.26980871 47529.274904125996 48624.14280945061 45442.15523015805 45429.67572788175 40971.549934604045 51964.121165734505 44690.10848003164 52424.40917013132 0.8792452214011831 0.956563375773461 0.9066249034849531 0.9275096005689292 0.8668129207271754 0.866574873175017 0.7815357499145166 0.9912199677271887 0.8524675659195358 1.0 15.67795107660332 -10.454786036857966 2.7490920247494266 1.0033599962285553 0.8936030558584873 0.2540968011758794 0.05542371177165096 19868434.940072138 21266657.92965979 514266.6241048547 0.013607200621483774 3.509247208711215e-11 10.454786036857966 -0.109756940370068 RNT(ph)LDVGEVLSK ddPTM_KYSE-520_SHP099_60min_R1 6 RNTLDVGEVLSK 12 1 E7EUN2 E7EUN2 AGAP1 1 RNT(1)LDVGEVLSK;RNT(1)LDVGEVLSK;RNT(1)LDVGEVLSK;RNT(1)LDVGEVLSK;RNT(1)LDVGEVLSK;RNT(1)LDVGEVLSK 220.97 1.2085e-10 4197880000.0 6140620.0 5309250.0 4961530.0 4312710.0 4724660.0 4615090.0 4419920.0 4632960.0 5919660.0 5087290.0 True False 5799987.5675775055 5054185.660653281 5281358.162528679 4722588.6617364595 5096463.862361871 4586285.511429284 4866728.647862269 4616889.343100988 4844798.966484833 5042220.5684517315 1.1502843814225394 1.0023729807213142 1.0474270395018395 0.9366089003096867 1.0107578185392225 0.9095765346174756 0.9651955089613723 0.9156460492799613 0.9608462979183953 1.0 22.265627798597855 -1.0000000000098508 0.5995204540146534 0.949794355723959 13.094494597110609 0.6937647485864715 0.03752630081821677 86.87502009210851 0.6749617730237405 0.01565819486585037 1381.714061430393 0.09999999999773178 1.0000000000098508 12.14470024138665 RNT(ph)LPAMDNSR ddPTM_KYSE-520_SHP099_60min_R1 1 RNTLPAMDNSR 11 1 Q9UQC2-2;Q9UQC2 Q9UQC2-2 GAB2 GRB2-associated-binding protein 2 1 RNT(1)LPAMDNSR 72.433 0.037518 429620000.0 194260.0 196580.0 153670.0 174080.0 188810.0 180600.0 171310.0 182410.0 180950.0 172500.0 True False 183484.01055229097 187136.0017274042 163575.81408069326 190624.51086093942 203668.2728180534 179472.8084098315 188627.6866244829 181777.26228481394 148094.04137829374 170971.78420296905 1.0731829898579526 1.0945431879288678 0.9567415748934592 1.1149471928925982 1.1912390911021244 1.0497217961811198 1.1032679310438362 1.0632003586569418 0.8661899509832803 1.0 17.38339872849988 -7.658795750345704 6.737793961746442 0.9347453762458441 1.0828479653345648 0.47098347443346444 0.06284876840365723 0.17885281538375014 9.983054710260602 0.044189230637112255 0.016241356186243353 2.193836458900845e-08 7.658795750345704 0.14810258908872076 RNT(ph)SAS(ph)DEDER ddPTM_KYSE-520_SHP099_60min_R1 1 RNTSASDEDER 11 1 Q32MZ4-2;Q32MZ4;Q32MZ4-4;C9JTC6 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 2 RNT(0.558)S(0.558)AS(0.884)DEDER 91.63600000000001 0.018691 70007000.0 153630.0 151310.0 149650.0 141160.0 132750.0 163020.0 161700.0 160010.0 199490.0 167090.0 True False 145107.83764618778 144040.84047905958 159296.6784484659 154575.80395869847 143196.6697558211 162002.53171080124 178046.2140399212 159454.96265661457 163267.64473365998 165609.71259405283 0.8762036680896861 0.8697608263600851 0.9618800489011075 0.9333740246117026 0.8646634760295054 0.978218784232217 1.0750952420064461 0.9628358153574909 0.9858579075846005 1.0 17.337427760199006 -6.433199794900813 5.761338977183876 1.0060027401765324 0.9051881941459751 0.6278373103401633 0.03857027688700682 0.16288680006290332 8.30812544362181 0.014380241839059064 0.012554427375794291 3.688078913987125e-07 6.433199794900813 -0.10081454603055728 RNT(ph)SASDEDER ddPTM_KYSE-520_SHP099_60min_R1 1 RNTSASDEDER 11 1 Q32MZ4-2;Q32MZ4;Q32MZ4-4;C9JTC6 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 RNT(0.582)S(0.337)AS(0.08)DEDER 145.43 0.00010939 109770000.0 200260.0 186740.0 190790.0 167200.0 169010.0 194300.0 175730.0 176100.0 224520.0 187320.0 True False 189151.17859158732 177768.7300975453 203088.62867479323 183090.63772948712 182310.12546464268 193087.30162807464 193494.503359526 175489.1502020488 183752.82768861266 185660.49053275483 1.018801458774648 0.9574935926724958 1.0938710120393853 0.9861583215906977 0.9819543454910722 1.0400021085477502 1.0421953685692167 0.9452153751101311 0.989724992976868 1.0 17.50230730975869 -7.257670363465937 24.971032162852445 0.9756026387646324 1.0161887688157702 0.17815545924709963 0.038107455865510266 558.4994908582482 3700288.996466889 0.018598672248659225 0.010156331410403556 5.524966340516334e-08 7.257670363465937 0.04058613005113787 RNTS(ph)AS(ph)DEDER ddPTM_KYSE-520_SHP099_60min_R1 1 RNTSASDEDER 11 1 Q32MZ4-2;Q32MZ4;Q32MZ4-4;C9JTC6 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 2 RNT(0.377)S(0.766)AS(0.857)DEDER 83.243 0.014337 81914000.0 230240.0 208780.0 198080.0 233340.0 203450.0 252430.0 234880.0 233470.0 304870.0 231370.0 True False 217468.1282279392 198749.8954148309 210848.5537392055 255516.5634437707 219460.3575278481 250854.4907358456 258623.9626078956 232660.1470623078 249513.29314728052 229320.24180313593 0.9483163218301008 0.8666914610418531 0.919450250363037 1.114234667793188 0.9570038641257311 1.0939047018413497 1.127785146981992 1.0145643717838004 1.088056122675292 1.0 17.80700417981396 -5.191457803158389 6.938304097887739 1.0573680647187937 0.9054546500907242 0.6021446893450138 0.053984835303905035 0.16702212659242563 14.11601325582833 0.014263254312112032 0.024852694402243802 6.434905846703553e-06 5.191457803158389 -0.1519134146280695 RNTSAS(ph)DEDER ddPTM_KYSE-520_SHP099_60min_R1 1 RNTSASDEDER 11 1 Q32MZ4-2;Q32MZ4;Q32MZ4-4;C9JTC6 Q32MZ4-2 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 RNT(0.073)S(0.249)AS(0.678)DEDER 162.67 2.6389e-05 118290000.0 145890.0 154770.0 150340.0 132720.0 146780.0 145510.0 149740.0 140590.0 173270.0 141120.0 True False 137797.19087549503 147334.61688549374 160031.1569525049 145333.66889627697 158330.75093604086 144601.818115806 164877.1805215697 140102.32610395266 141808.53578124865 139869.7865896985 0.9851819627044737 1.0533698554763151 1.144143855898979 1.0390640640827353 1.1319867914040418 1.0338316919006154 1.178790534693738 1.001662542854493 1.0138611006624139 1.0 17.093724832617145 RNVPQEESLEDS(ph)DVDADFK ddPTM_KYSE-520_SHP099_60min_R1 2 RNVPQEESLEDSDVDADFK 19 1 O00505 O00505 KPNA3 Importin subunit alpha-4 1 RNVPQEESLEDS(1)DVDADFK;RNVPQEESLEDS(1)DVDADFK 151.91 7.2304e-07 368140000.0 562960.0 578910.0 481450.0 513380.0 464480.0 591150.0 497740.0 480500.0 652060.0 530860.0 True False 531731.4865670627 551098.2946383748 512485.0373472366 562171.4808466746 501031.9334703114 587460.4135740416 548056.4166742756 478833.25764954346 533662.3410949446 526156.9934028303 1.0105947335759624 1.0474027743587344 0.9740154436280078 1.0684481778165236 0.9522479787448478 1.1165116513509434 1.0416214619325204 0.9100577653691749 1.0142644643827212 1.0 19.005133805912674 -7.216907511976138 24.967210822220814 0.9716207004102667 1.030428960015272 0.2014970043474249 0.05036972879471943 618.4327916147356 346730.679839736 0.022646665665613627 0.013074988925477881 6.068655548541953e-08 7.216907511976138 0.05880825960500535 RNVSSFPDDATS(ph)PLQENR ddPTM_KYSE-520_SHP099_60min_R1 1 RNVSSFPDDATSPLQENR 18 1 P52292;J3QLL0;J3KS65 P52292 KPNA2 Importin subunit alpha-1 1 RNVSSFPDDAT(0.18)S(0.82)PLQENR 125.11 2.9599000000000002e-05 340580000.0 149370.0 142550.0 122220.0 158560.0 123390.0 113740.0 110680.0 145950.0 181560.0 119640.0 True False 141084.14833828717 135701.68402808774 130098.49675891417 173629.49472719757 133100.09100693627 113030.1064702892 121868.61453270573 145443.73351498603 148593.28075514222 118580.08267851146 1.1897794735123235 1.1443885091225272 1.0971361616573576 1.4642382667073475 1.1224489644503854 0.9531963877671675 1.0277325818966578 1.2265443760003607 1.2531048840470205 1.0 16.855502182178977 -5.977970995271116 24.99837565600562 1.0950919425846883 1.219677423425166 0.19938810333734736 0.12543947398882901 442.27760600582695 501891.28829484567 0.04133346624546331 0.046864630478467076 1.0520321323439298e-06 5.977970995271116 0.1245854808404776 RPAAAAAAGS(ph)AS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RPAAAAAAGSASPR 14 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 2 RPAAAAAAGS(1)AS(1)PR;RPAAAAAAGS(1)AS(1)PR 79.347 0.007240300000000001 532990000.0 633940.0 504100.0 495630.0 552080.0 547620.0 538150.0 523750.0 523990.0 628930.0 549390.0 True False 598774.084471941 479882.27933047403 527579.1028360393 604549.5172110951 590714.5784684203 534791.2062333927 576695.7613074136 522172.4009901857 514732.1660350935 544522.8320189517 1.0996308130034502 0.8812895458418025 0.9688833448542656 1.110237223606547 1.0848297697237073 0.9821281584291396 1.0590846285897193 0.9589540975795334 0.9452903271780139 1.0 19.054633017318242 -9.44042498540518 6.629685586622943 1.0000000027895912 1.0093056027955483 0.0016507246680482757 0.07205664419383029 0.0 0.0 0.07173921249543824 0.017399314742195426 3.6272293305530925e-10 9.44042498540518 0.009305600005957038 RPAAAAAAGS(ph)ASPR ddPTM_KYSE-520_SHP099_60min_R1 3 RPAAAAAAGSASPR 14 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RPAAAAAAGS(0.634)AS(0.366)PR;RPAAAAAAGS(0.638)AS(0.362)PR;RPAAAAAAGS(0.554)AS(0.446)PR 103.76 0.00095093 11884640000.0 2218094.0 1898531.0 1809724.0 1603394.0 1799025.0 1915539.0 1878778.0 1861117.0 2065040.0 1859200.0 True False 2095051.9041592341 1807322.7210068696 1926381.7047007794 1755780.083682016 1940598.0324479544 1903583.4105678864 2068703.2153462938 1854661.2195149746 1690080.7914221142 1842728.9344357112 1.1369289671466467 0.9807859893187796 1.0453961343428324 0.952815170409032 1.05311095744107 1.0330241062561978 1.1226302342616556 1.0064753338683083 0.9171619112496643 1.0 20.813412435351516 RPAAAAAAGSAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 11 RPAAAAAAGSASPR 14 1 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RPAAAAAAGS(0.002)AS(0.998)PR;RPAAAAAAGS(0.225)AS(0.775)PR;RPAAAAAAGS(0.002)AS(0.998)PR;RPAAAAAAGSAS(1)PR;RPAAAAAAGS(0.004)AS(0.996)PR;RPAAAAAAGSAS(1)PR;RPAAAAAAGSAS(1)PR;RPAAAAAAGS(0.005)AS(0.995)PR;RPAAAAAAGSAS(1)PR;RPAAAAAAGS(0.001)AS(0.999)PR;RPAAAAAAGSAS(1)PR 190.18 9.968000000000001e-11 86611197000.0 11776546.0 10499304.0 10649405.0 9078925.0 10530521.0 11082427.0 10137562.0 10694559.0 12313143.0 9362564.0 True False 11123277.517417565 9994901.676063403 11335882.68595047 9941783.30232167 11359213.092231553 11013257.462275442 11162365.700030755 10657462.070957834 10077386.62027547 9279618.966924565 1.198678260073433 1.0770810430566522 1.2215892405016915 1.0713568453357045 1.2241033961328913 1.1868221638765666 1.2028905216708663 1.1484805689699467 1.08596987184435 1.0 23.145634136981528 -7.982844888070091 2.222769504617824 1.000971648731927 1.1669197903856163 0.5180348368409444 0.051276779720635234 0.23142450199641787 2.6253602406801924 0.046846024284327416 0.01296418725276238 1.040291648404984e-08 7.982844888070091 0.16594814165368943 RPAEAT(ph)SSPTSPERPR ddPTM_KYSE-520_SHP099_60min_R1 1 RPAEATSSPTSPERPR 16 2 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 RPAEAT(0.312)S(0.228)S(0.168)PT(0.125)S(0.168)PERPR 77.391 0.027226999999999998 9691800000.0 59847.0 37937.0 46857.0 48787.0 42715.0 34689.0 59569.0 46180.0 59539.0 45218.0 True False 56527.16760796326 36114.44957540205 49877.477193850784 53423.70181165361 46076.42748489571 34472.493083768815 65590.81585741542 46019.81235849302 48728.218456049864 44817.40369907164 1.2612771589250757 0.8058130680191574 1.1129042085694036 1.1920302695437095 1.0280922963382224 0.7691764858856134 1.46351217258875 1.026829056575767 1.0872610734713137 1.0 15.451771454569856 RPAEATSS(ph)PT(ph)SPERPR ddPTM_KYSE-520_SHP099_60min_R1 2 RPAEATSSPTSPERPR 16 2 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 2 RPAEAT(0.081)S(0.088)S(0.859)PT(0.63)S(0.342)PERPR;RPAEAT(0.061)S(0.09)S(0.84)PT(0.878)S(0.131)PERPR 73.21 0.046502999999999996 3558980000.0 402340.0 338160.0 366250.0 350210.0 353360.0 347100.0 314050.0 358490.0 446700.0 371450.0 True False 380021.39815509453 321914.28601149184 389859.0610207198 383493.8531055245 381167.4216566249 344933.6201497928 345797.2388326365 357246.4818621952 365590.5403906261 368159.2419837273 1.0322201776259945 0.8743887136363685 1.058941394272948 1.041652115098811 1.0353330249236892 0.9369141958550613 0.9392599706838836 0.9703585870539834 0.9930228517984216 1.0 18.489970392697927 -6.263353942076495 24.989585074357404 0.9642678368758033 1.0056993605048523 0.13170278828684223 0.05144478646844454 391.85441919290224 5114588.466607542 0.018392554313196214 0.017043980441611675 5.453132595907046e-07 6.263353942076495 0.041431523629049005 RPAEATSS(ph)PTS(ph)PERPR ddPTM_KYSE-520_SHP099_60min_R1 5 RPAEATSSPTSPERPR 16 2 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 2 RPAEAT(0.071)S(0.42)S(0.51)PT(0.183)S(0.816)PERPR;RPAEAT(0.275)S(0.266)S(0.459)PT(0.278)S(0.722)PERPR;RPAEAT(0.015)S(0.416)S(0.569)PT(0.43)S(0.57)PERPR;RPAEAT(0.046)S(0.42)S(0.502)PT(0.122)S(0.911)PERPR;RPAEAT(0.109)S(0.325)S(0.434)PT(0.269)S(0.863)PERPR 139.2 1.3784e-05 15146980000.0 3578380.0 2968660.0 3076590.0 2854620.0 2952380.0 2962790.0 3100030.0 2947270.0 3374950.0 2975530.0 True False 3379880.1280763196 2826041.1175504923 3274911.91411805 3125922.2265272015 3184715.509255675 2944298.128618855 3413411.2857772284 2937046.6082679895 2762144.1555660223 2949169.119127312 1.146044866045681 0.9582499352857544 1.1104523958555244 1.0599331880472804 1.0798687293314881 0.9983483515825303 1.1574145625081311 0.995889516548678 0.9365838458200618 1.0 21.49187712496576 -7.506234878204259 24.254439678400434 0.967606812939035 1.0675390337025057 0.35664792178735605 0.059190712029477406 487.37952641880315 710246.2412146829 0.031121004180976023 0.01430909297703011 3.1172032602811676e-08 7.506234878204259 0.09993222076347064 RPAEATSSPT(ph)SPERPR ddPTM_KYSE-520_SHP099_60min_R1 5 RPAEATSSPTSPERPR 16 2 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 RPAEAT(0.001)S(0.179)S(0.154)PT(0.333)S(0.333)PERPR;RPAEAT(0.302)S(0.211)S(0.149)PT(0.319)S(0.02)PERPR;RPAEATS(0.019)S(0.065)PT(0.802)S(0.114)PERPR;RPAEAT(0.003)S(0.007)S(0.049)PT(0.871)S(0.07)PERPR;RPAEAT(0.001)S(0.001)S(0.006)PT(0.871)S(0.121)PERPR 173.36 6.6315e-08 24598180000.0 420069.0 394651.0 363240.0 330910.0 346116.0 363658.0 361224.0 323671.0 391547.0 350850.0 True False 396766.9351832096 375691.3735767722 386655.0316045495 362359.5869082803 373353.3600693472 361388.2755299142 397740.0471265096 322548.2608463794 320451.93489663844 347741.74195716984 1.1409816174213507 1.0803746811133328 1.1119028432662894 1.0420364977435206 1.073651261904968 1.0392433002030144 1.1437799928416355 0.9275511735548462 0.9215227746115893 1.0 18.407656729020573 -7.271873840464483 24.994612210844792 0.9434027157545195 1.0862738143410395 0.730177688736721 0.03905502565868504 360.25869199723604 862955.9505722664 0.020504489372546134 0.01001796357522479 5.347196691937284e-08 7.271873840464483 0.14287109858652003 RPAEATSSPTS(ph)PERPR ddPTM_KYSE-520_SHP099_60min_R1 6 RPAEATSSPTSPERPR 16 2 Q9BU76 Q9BU76 MMTAG2 Multiple myeloma tumor-associated protein 2 1 RPAEAT(0.014)S(0.014)S(0.006)PT(0.395)S(0.571)PERPR;RPAEAT(0.027)S(0.027)S(0.046)PT(0.115)S(0.785)PERPR;RPAEAT(0.15)S(0.113)S(0.086)PT(0.113)S(0.537)PERPR;RPAEAT(0.005)S(0.018)S(0.092)PT(0.22)S(0.664)PERPR;RPAEAT(0.003)S(0.003)S(0.013)PT(0.26)S(0.721)PERPR;RPAEAT(0.07)S(0.088)S(0.07)PT(0.33)S(0.443)PERPR 156.87 1.2509e-06 9185600000.0 1770912.0 1489102.0 1642962.0 1464541.0 1545769.0 1574032.0 1534195.0 1464339.0 1824164.0 1584597.0 True False 1672675.9811344496 1417563.30473233 1748869.9593521452 1603730.5363096935 1667412.2260774823 1564207.882430474 1689286.4029002932 1459259.5497882937 1492941.8010322936 1570558.7033778098 1.065019714027254 0.9025853676679313 1.1135336460782015 1.021121039831584 1.061668196477705 0.9959563301049003 1.0755958368618346 0.9291340378744555 0.9505800692590572 1.0 20.58284643749028 -7.2704238589341665 24.7407838137291 0.9548927880496053 1.0308194224451512 0.26416734773674044 0.056069707018310405 753.864277589799 2075917.87784434 0.028725950167420782 0.014116643198075114 5.3650792445304485e-08 7.2704238589341665 0.07592663439554592 RPAEEQKR ddPTM_KYSE-520_SHP099_60min_R1 1 RPAEEQKR 8 2 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;H0YDQ3;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 0 53.493 0.039516 85808000.0 22807.0 26734.0 20190.0 21881.0 24722.0 30159.0 18175.0 22874.0 26922.0 34513.0 False True 21541.85024537268 25449.658511447906 21491.479705142192 23960.563661237476 26667.480751061477 29970.766494086965 20012.30637090644 22794.655432831743 22033.64344839138 34207.24167070768 0.6297453168759697 0.7439845269149818 0.628272805858701 0.7004529594023178 0.779585825942153 0.8761526808445217 0.5850312797375699 0.6663692925685747 0.6441221908651937 1.0 15.062014155434593 -10.65998353622989 2.562375884916844 1.0405594378397303 0.6982647029094468 0.5564433833930041 0.08168026922631375 11977969.276864558 10006840.521513416 3185886.3176117786 0.022104914704741747 2.1878445618837556e-11 10.65998353622989 -0.3422947349302835 RPAGGRPS(ph)PSAMGK ddPTM_KYSE-520_SHP099_60min_R1 6 RPAGGRPSPSAMGK 14 2 H0Y4V9;Q92615;A0A087X183 H0Y4V9 LARP4B La-related protein 4B 1 RPAGGRPS(0.996)PS(0.004)AMGK;RPAGGRPS(0.899)PS(0.101)AMGK;RPAGGRPS(0.99)PS(0.01)AMGK;RPAGGRPS(0.93)PS(0.07)AMGK;RPAGGRPS(0.937)PS(0.063)AMGK;RPAGGRPS(0.779)PS(0.221)AMGK 98.07700000000001 0.0011994000000000002 10124150000.0 7949770.0 6902190.0 6964630.0 6609110.0 6368890.0 6607660.0 6462190.0 6420620.0 7500290.0 6261540.0 True False 7508780.410626395 6570598.432001588 7413581.193602001 7237237.82729862 6870085.408972903 6566419.142952973 7115451.230096725 6398348.367803972 6138426.40292458 6206067.62700441 1.2099095372331268 1.058737807401743 1.194569837000059 1.1661551665675198 1.1069949317147558 1.0580643875649323 1.1465313718360595 1.0309827015037498 0.9891007916533968 1.0 22.565247987204714 -7.178525214304908 0.7507227780600003 0.9840750037471806 1.1491606268638785 0.5945560066016669 0.048487027542651676 0.4748067172016447 0.5045471495582617 0.04391336809599769 0.02134640632742923 6.62940857478276e-08 7.178525214304908 0.16508562311669794 RPAGPLVLPELPLS(ph)PLCPSNR ddPTM_KYSE-520_SHP099_60min_R1 2 RPAGPLVLPELPLSPLCPSNR 21 1 Q86Y91 Q86Y91 KIF18B Kinesin-like protein KIF18B 1 RPAGPLVLPELPLS(0.993)PLCPS(0.007)NR;RPAGPLVLPELPLS(1)PLCPSNR 121.26 5.4518e-05 578600000.0 320750.0 325080.0 263590.0 274480.0 268390.0 297720.0 254890.0 316140.0 304600.0 273770.0 True False 302957.35810072697 309462.66884497216 280581.4331589116 300566.4966745788 289510.766069792 295861.81904637336 280656.768686676 315043.3841276307 249292.318341134 271344.61078983726 1.1165040544526403 1.1404784047274048 1.0340409280368146 1.1076928920743319 1.0669486496417828 1.0903545059736797 1.0343185658625489 1.1610452966454496 0.9187295727580037 1.0 18.049766729850177 -7.769357801169448 24.999999607636976 0.9593647499351062 1.0909327964741593 0.6080805577246196 0.043156948154277924 124.226518034274 392191.60888826405 0.036845383264348795 0.01019627808042754 1.700756732601534e-08 7.769357801169448 0.13156804653905307 RPAGS(ph)VQNPVYHNQPLNPAPSR ddPTM_KYSE-520_SHP099_60min_R1 1 RPAGSVQNPVYHNQPLNPAPSR 22 1 P00533;E9PFD7 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 RPAGS(0.572)VQNPVY(0.428)HNQPLNPAPSR 90.633 0.0017492 459870000.0 47565.0 38746.0 37799.0 52366.0 46524.0 45674.0 27485.0 38494.0 52981.0 34181.0 True False 44926.47463152327 36884.58400106832 40235.584020538365 57342.84889558802 50185.1741146503 45388.93162408994 30263.452027750383 38360.47329856716 43360.98594232316 33878.182932415606 1.3261181900206445 1.0887415087949153 1.1876547245997606 1.692618786845287 1.4813419661487128 1.3397687743359024 0.8933021020673885 1.1323061031665536 1.2799088436597978 1.0 15.048068876867331 -6.659188542136456 9.476424441351801 1.087790599409086 1.3557179050144483 0.36790946924347345 0.17724993908233974 0.3750157079666722 31.68696914394283 0.07469358891590665 0.05778108114717998 2.1918531700986502e-07 6.659188542136456 0.2679273056053624 RPAGSVQNPVY(ph)HNQPLNPAPSR ddPTM_KYSE-520_SHP099_60min_R1 6 RPAGSVQNPVYHNQPLNPAPSR 22 1 P00533;E9PFD7 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 RPAGSVQNPVY(1)HNQPLNPAPSR;RPAGSVQNPVY(1)HNQPLNPAPSR;RPAGSVQNPVY(1)HNQPLNPAPSR;RPAGSVQNPVY(1)HNQPLNPAPSR;RPAGS(0.001)VQNPVY(0.999)HNQPLNPAPSR;RPAGSVQNPVY(1)HNQPLNPAPSR 206.85 7.5931e-17 13986900000.0 1860028.0 2301904.0 1820824.0 2638175.0 2257560.0 1825183.0 1737242.0 2331579.0 2067701.0 2030493.0 True False 1756848.5389661097 2191317.0766116553 1938197.2284614048 2888906.358803763 2435217.128240692 1813791.355879744 1912859.375208045 2323491.2966436306 1692258.6209004659 2012504.4117196489 0.872966304439012 1.0888508188358277 0.9630772569612656 1.4354782737272334 1.210043125401073 0.9012608098234637 0.9504870469195846 1.1545273059343253 0.840872005569648 1.0 20.940560515164638 -6.264155745619953 24.99629321632528 0.9779034921793424 1.122147426551098 0.17032027689713003 0.15858521995693958 485.35366556052026 4466246.3830738 0.057210891824813 0.05273031887665158 5.443074196481257e-07 6.264155745619953 0.14424393437175564 RPAPAVS(ph)PGSWKPGPPGS(ph)PRPWK ddPTM_KYSE-520_SHP099_60min_R1 3 RPAPAVSPGSWKPGPPGSPRPWK 23 3 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 RPAPAVS(0.996)PGS(0.004)WKPGPPGS(1)PRPWK;RPAPAVS(0.957)PGS(0.044)WKPGPPGS(0.999)PRPWK;RPAPAVS(0.972)PGS(0.028)WKPGPPGS(1)PRPWK 71.472 0.019968 5459940000.0 2314010.0 2086920.0 2065690.0 1989450.0 1792670.0 1983600.0 1815180.0 1946890.0 2411980.0 2024460.0 True False 2185647.252435427 1986661.2306692163 2198847.682620862 2178526.729850044 1933742.9301029614 1971219.6166209385 1998676.1088496277 1940136.692997541 1974025.233067788 2006524.859406049 1.089269959547075 0.9901004821127846 1.0958487119226334 1.0857212755863435 0.9637273722466455 0.9824047817700294 0.9960883860872053 0.9669138580081388 0.9838030283124022 1.0 20.936267599511186 -5.764101626915492 24.999996746764324 0.9812109594717873 1.062055038884399 0.6546923378288183 0.029517474861264704 44.30775921143708 416074.4423311006 0.008999106559869999 0.01067830577301227 1.7214656969227952e-06 5.764101626915492 0.08084407941261174 RPAQPHRPS(ph)PASSLQR ddPTM_KYSE-520_SHP099_60min_R1 2 RPAQPHRPSPASSLQR 16 2 H0Y507;Q5TCZ1-2;Q5TCZ1-3;Q5TCZ1 H0Y507 SH3PXD2A SH3 and PX domain-containing protein 2A 1 RPAQPHRPS(1)PASSLQR;RPAQPHRPS(0.998)PAS(0.001)S(0.001)LQR 168.05 2.7626e-08 4111000000.0 343670.0 319890.0 313600.0 314880.0 303880.0 222592.0 270950.0 253710.0 299970.0 229645.0 True False 324605.94001084025 304522.00423532067 333815.15777774126 344806.10052787577 327793.62715931446 221202.7207616902 298340.2702171717 252829.93922635922 245503.00962833245 227610.52396110672 1.4261464468413936 1.337908278298047 1.466606868471435 1.514895245295402 1.4401514545756535 0.9718475091225945 1.3107490155778168 1.1108007434206422 1.0786100983198963 1.0 17.796207739091372 -6.244902858233106 24.488139750534497 1.1148482470822645 1.4375853292167307 0.7636656888661035 0.09499371776924445 319.90329699012653 473729.50732123246 0.03129113356020956 0.03119933221588524 5.689801844970653e-07 6.244902858233106 0.32273708213446617 RPAS(ph)GDDLSAK ddPTM_KYSE-520_SHP099_60min_R1 1 RPASGDDLSAK 11 1 D6RB33;D6RAL8;D6RDV8;Q92564-2;Q92564;Q92564-3 D6RB33 DCUN1D4 DCN1-like protein;DCN1-like protein 4 1 RPAS(0.998)GDDLS(0.002)AK 77.89399999999999 0.012565999999999999 0.0 171960.0 143170.0 168250.0 141680.0 145290.0 150930.0 145670.0 159520.0 197880.0 136650.0 True False 162421.03600623863 136291.89829744867 179095.66420951815 155145.22460235466 156723.49641298119 149987.9898853593 160395.74520219764 158966.662352248 161949.98014886287 135439.38731209136 1.1992156730004528 1.0062944096416568 1.3223307323210947 1.1454956174960786 1.1571485926161575 1.1074178114800812 1.1842621883145383 1.1737107314723967 1.1957376902162402 1.0 17.047287826470196 -10.40564221009163 5.615619634316348 0.9999247076911987 1.1638676595003787 0.30489959585841975 0.075024756870762 6.742575704560254e-05 7.136282429538056e-06 0.06924776102572835 0.01678735080148556 3.929685459580158e-11 10.40564221009163 0.16394295180918006 RPAS(ph)MAVMEGDLVK ddPTM_KYSE-520_SHP099_60min_R1 1 RPASMAVMEGDLVK 14 1 Q68EM7-2;Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7 Q68EM7-2;Q68EM7-3 ARHGAP17 Rho GTPase-activating protein 17 1 RPAS(1)MAVMEGDLVK 137.43 0.00026107 0.0 144570.0 143540.0 131380.0 118730.0 139100.0 132590.0 138580.0 180340.0 163970.0 172560.0 True False 136550.41390685004 136644.1229420673 139848.96501543233 130014.06350252392 150046.37862926352 131762.45662823683 152589.01881046552 179714.44263167243 134197.18134732702 171031.25264964835 0.7983945144023992 0.7989424203188064 0.8176807621347902 0.7601772277775061 0.8773038629181321 0.7703998806472389 0.8921703866780354 1.0507696099251012 0.7846354351518745 1.0 17.38390044822008 -6.945620828225502 5.538263073065926 0.9446367584781704 0.8064566416875587 0.4588191159235834 0.06981658806473576 0.16436061029784174 10.70559432167411 0.02787678097771051 0.018407962003246996 1.1333894657124559e-07 6.945620828225502 -0.1381801167906117 RPAS(ph)MGSEGLGGDADPMKR ddPTM_KYSE-520_SHP099_60min_R1 1 RPASMGSEGLGGDADPMKR 19 2 Q6DT37 Q6DT37 CDC42BPG Serine/threonine-protein kinase MRCK gamma 1 RPAS(0.875)MGS(0.125)EGLGGDADPMKR 62.193000000000005 0.015479 580980000.0 282030.0 228690.0 197530.0 165760.0 239040.0 244320.0 197520.0 212070.0 269600.0 189740.0 True False 266385.23368713347 217703.3891293118 210263.0998591746 181513.78056243877 257851.08804844847 242795.1082540978 217487.2492094329 211334.37866750997 220647.4360629344 188059.05121548614 1.4164978072865944 1.157633135561542 1.1180695558133287 0.9651956626881654 1.3711176695930025 1.291057817663308 1.1564838161404243 1.1237660580630813 1.1732880424357086 1.0 17.52082621888708 -8.404633040018794 0.8138862169610142 0.9999773257203953 1.2031388961913416 0.1993319424460286 0.12377895744431759 2.4878010351719624 2.9121688623973268 0.13094194144885554 0.04449375480168026 3.938827487099928e-09 8.404633040018794 0.2031615704709463 RPAS(ph)PALLLPPCMLK ddPTM_KYSE-520_SHP099_60min_R1 3 RPASPALLLPPCMLK 15 1 Q9HAW0-2;Q9HAW0 Q9HAW0-2 BRF2 Transcription factor IIIB 50 kDa subunit 1 RPAS(1)PALLLPPCMLK;RPAS(1)PALLLPPCMLK;RPAS(1)PALLLPPCMLK 169.64 3.839e-06 1671670000.0 2608470.0 2358400.0 1932430.0 1645720.0 1915950.0 2737360.0 1840270.0 2111670.0 2605250.0 2329560.0 True False 2463772.9692439726 2245098.9239694285 2056997.529797322 1802128.7339962402 2066724.3647357097 2720275.1208678666 2026302.450904427 2104345.1096374844 2132202.2730080094 2308921.910770255 1.0670663904878703 0.9723581007642067 0.8908909046261805 0.780506575640339 0.8951036217791583 1.1781581300687576 0.8775967872505717 0.9113972628617293 0.92346227174773 1.0 21.13878795038355 RPAS(ph)PS(ph)SPEHLPATPAESPAQR ddPTM_KYSE-520_SHP099_60min_R1 2 RPASPSSPEHLPATPAESPAQR 22 1 Q9H7L9 Q9H7L9 SUDS3 Sin3 histone deacetylase corepressor complex component SDS3 2 RPAS(0.981)PS(0.544)S(0.465)PEHLPAT(0.009)PAESPAQR;RPAS(0.992)PS(0.768)S(0.239)PEHLPATPAESPAQR 93.494 0.00158 2911130000.0 600990.0 631700.0 615600.0 635580.0 527410.0 525940.0 489560.0 561540.0 602890.0 506220.0 True False 567651.8866561374 601352.1837989687 655282.5609948263 695985.3321059048 568914.1664475901 522657.4133724632 539049.5024451698 559592.1488044218 493420.3736201124 501735.2846332005 1.131377250199029 1.198544735075976 1.3060324459219135 1.387156441697564 1.1338930784258108 1.0416995363492485 1.0743703282483876 1.1153135247673844 0.9834276933120883 1.0 18.936566873921013 -5.97830756967877 8.651510279206352 1.055955323215262 1.2562229922387071 0.6618088097157793 0.0714154787195777 0.14769744629242856 50.839368891304524 0.023755061624483476 0.0266772284611173 1.0512171325344211e-06 5.97830756967877 0.20026766902344506 RPAS(ph)VSSSAAVEHEQR ddPTM_KYSE-520_SHP099_60min_R1 6 RPASVSSSAAVEHEQR 16 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 RPAS(0.967)VS(0.021)S(0.008)S(0.003)AAVEHEQR;RPAS(0.992)VS(0.006)S(0.002)SAAVEHEQR;RPAS(0.997)VS(0.003)SSAAVEHEQR;RPAS(0.899)VS(0.099)S(0.002)SAAVEHEQR;RPAS(0.915)VS(0.084)S(0.001)SAAVEHEQR;RPAS(0.97)VS(0.03)SSAAVEHEQR 228.11 1.148e-18 2951810000.0 1590777.0 1486127.0 1435074.0 1577335.0 1521517.0 1508150.0 1411954.0 1556231.0 1977904.0 1554252.0 True False 1502533.4286746702 1414731.2281978938 1527581.1662395832 1727244.4441569399 1641251.7316524878 1498737.0764301617 1554688.089663099 1550832.797888046 1618766.4925023068 1540482.5364697587 0.9753654410896118 0.918368884232831 0.9916251110124618 1.1212359785104564 1.0654140457922077 0.9729010494755346 1.0092214957696921 1.0067188437215304 1.0508178146647136 1.0 20.55495089682232 -4.999199227668548 23.46660361290079 1.0325401578826539 0.9488995480989606 0.41298176317414026 0.040915112322092655 12.726646192423688 372821.29008705035 0.01142252567918658 0.02341168138215897 1.0018455473633756e-05 4.999199227668548 -0.08364060978369325 RPASMGS(ph)EGLGGDADPMK ddPTM_KYSE-520_SHP099_60min_R1 1 RPASMGSEGLGGDADPMK 18 1 Q6DT37 Q6DT37 CDC42BPG Serine/threonine-protein kinase MRCK gamma 1 RPAS(0.304)MGS(0.696)EGLGGDADPMK 150.09 2.2074000000000002e-06 165730000.0 271270.0 242540.0 170070.0 177680.0 210740.0 267730.0 221760.0 273650.0 278890.0 229510.0 True False 256222.1123366617 230888.0143400378 181032.98432162125 194566.65377856028 227324.03905342164 266058.9977605991 244177.66496903493 272700.77202038985 228250.60624477628 227476.71995607828 1.1263663041481065 1.0149962351515276 0.7958308188924805 0.8553255639351915 0.9993288064700154 1.1696097860562187 1.0734182601902353 1.198807385973578 1.0034020461032118 1.0 17.79535938140766 -6.036424933956818 6.884157453122615 1.0992941827467204 0.940087403988318 0.2994459774829812 0.10143912326579746 0.2559241039406609 37.760698616097116 0.03478262561782555 0.03558319406803607 9.195494014603968e-07 6.036424933956818 -0.1592067787584024 RPATADS(ph)PKPSAK ddPTM_KYSE-520_SHP099_60min_R1 10 RPATADSPKPSAK 13 2 Q03111 Q03111 MLLT1 Protein ENL 1 RPAT(0.001)ADS(0.999)PKPSAK;RPAT(0.11)ADS(0.889)PKPS(0.001)AK;RPAT(0.002)ADS(0.997)PKPS(0.002)AK;RPAT(0.002)ADS(0.998)PKPSAK;RPAT(0.016)ADS(0.984)PKPSAK;RPAT(0.026)ADS(0.974)PKPSAK;RPAT(0.002)ADS(0.998)PKPSAK;RPATADS(1)PKPSAK;RPAT(0.043)ADS(0.957)PKPSAK;RPAT(0.005)ADS(0.995)PKPSAK 173.28 3.8165e-07 52787160000.0 41802900.0 35175100.0 34812900.0 31772300.0 34305200.0 33292900.0 33738900.0 32811500.0 38795900.0 33062400.0 True False 39484009.80498482 33485235.397098515 37056995.23660945 34791929.83930965 37004824.07011225 33085106.66172583 37149557.27193264 32697684.564761672 31751542.525051866 32769492.85815793 1.204901460510559 1.0218417337747234 1.1308382280131672 1.0617170668434142 1.1292461628956807 1.0096313301195727 1.133662868471408 0.9978086846291129 0.9689360364070253 1.0 24.965850010064987 -7.349763544332095 6.116501369755046 0.9850790662776422 1.093280099212788 0.45274133443608044 0.05518547488767944 0.2135516072040894 12.008240966572066 0.02838220709462171 0.013379386471237232 4.469268594036615e-08 7.349763544332095 0.10820103293514582 RPCEQIS(ph)PEEEER ddPTM_KYSE-520_SHP099_60min_R1 6 RPCEQISPEEEER 13 1 P15407 P15407 FOSL1 Fos-related antigen 1 1 RPCEQIS(1)PEEEER;RPCEQIS(1)PEEEER;RPCEQIS(1)PEEEER;RPCEQIS(1)PEEEER;RPCEQIS(1)PEEEER;RPCEQIS(1)PEEEER 151.55 3.1889e-05 3069100000.0 2149273.0 2026594.0 1963365.0 1868701.0 2155294.0 1992051.0 1929843.0 1980519.0 2347010.0 2117253.0 True False 2030048.5422204984 1929233.3822603878 2089926.6493950689 2046301.7811945565 2324903.3758546333 1979617.8707951992 2124930.3638926665 1973649.041845612 1920852.14730737 2098495.7856179094 0.9673827110511655 0.9193410801596241 0.9959165339851672 0.9751278964765783 1.1078904193129258 0.9433508917971422 1.0125969174948681 0.9405065549199872 0.9153471550774492 1.0 21.000924135205015 -10.115755180293707 13.529833527626192 1.0000218221092319 0.977267885221492 0.017760683022998824 0.05334032728217289 0.0 0.0 0.05274996868102072 0.012793746624698352 7.660283093249857e-11 10.115755180293707 -0.022753936887739856 RPDADLK ddPTM_KYSE-520_SHP099_60min_R1 2 RPDADLK 7 1 P27824;P27824-2;P27824-3;D6RGY2;D6RFL1;H0Y9H1 P27824 CANX Calnexin 0 ; 111.17 0.007225799999999999 2000910000.0 2677700.0 3171800.0 2077790.0 2077410.0 2996900.0 3578800.0 2800300.0 3590600.0 3395400.0 2844400.0 False True 2529162.6431373865 3019421.967031137 2211727.667981546 2274846.4218039075 3232738.9799715327 3556463.3817115417 3083381.6522943215 3578145.046652336 2778880.9510685722 2819200.8289097175 0.8971204240584383 1.0710205303816018 0.7845229205742315 0.8069118022654914 1.1466863044381783 1.261514733268204 1.0937076992442472 1.269205446437148 0.9856981179106923 1.0 21.42685482288064 -5.774007472771064 24.986997929589258 1.144743296606366 0.8953050424399428 0.5053765920239124 0.11355443221762487 175.36284297927546 348642.8870090899 0.03487785991671441 0.039812846243801145 1.682645108066508e-06 5.774007472771064 -0.24943825416642318 RPDDVPLSLS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 4 RPDDVPLSLSPSK 13 1 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 RPDDVPLS(0.001)LS(0.5)PS(0.5)K;RPDDVPLS(0.001)LS(0.956)PS(0.043)K;RPDDVPLSLS(0.5)PS(0.5)K;RPDDVPLS(0.001)LS(0.971)PS(0.028)K 194.67 1.1884999999999999e-08 2891870000.0 4062180.0 3537850.0 3124150.0 3391060.0 3542860.0 3672510.0 3380090.0 3705750.0 3924070.0 3683570.0 True False 3836842.777644933 3367886.3755788864 3325537.707816742 3713345.3228406305 3821662.9258840606 3649588.502841588 3721782.483699427 3692895.618178556 3211557.805754742 3650936.4355740966 1.0509201804390231 0.9224719287804578 0.9108725299660861 1.0170939396967946 1.0467623836576376 0.9996307980825482 1.0194048977229564 1.0114927179217958 0.8796531691052946 1.0 21.799835120353798 -4.208378254000288 21.59203129728598 0.9821063975007897 1.0509223154947174 0.14359905458142508 0.05235813528843386 19459.1231772971 7917149.627712033 0.013696059869645928 10.392190442314906 6.189018003032709e-05 4.208378254000288 0.06881591799392772 RPDDVPLSLS(ph)PSKR ddPTM_KYSE-520_SHP099_60min_R1 11 RPDDVPLSLSPSKR 14 2 F8WDB4;Q9UFC0 F8WDB4 LRWD1 Leucine-rich repeat and WD repeat-containing protein 1 1 RPDDVPLS(0.005)LS(0.902)PS(0.093)KR;RPDDVPLS(0.018)LS(0.965)PS(0.018)KR;RPDDVPLS(0.009)LS(0.975)PS(0.016)KR;RPDDVPLS(0.203)LS(0.779)PS(0.019)KR;RPDDVPLS(0.032)LS(0.62)PS(0.347)KR;RPDDVPLS(0.072)LS(0.907)PS(0.021)KR;RPDDVPLS(0.021)LS(0.816)PS(0.164)KR;RPDDVPLS(0.074)LS(0.695)PS(0.232)KR;RPDDVPLS(0.205)LS(0.696)PS(0.098)KR;RPDDVPLS(0.001)LS(0.942)PS(0.058)KR;RPDDVPLS(0.001)LS(0.91)PS(0.089)KR 205.65 8.5252e-12 38645760000.0 15645070.0 14744910.0 14295830.0 13271900.0 13948610.0 13352030.0 13397010.0 12849340.0 15754610.0 13099730.0 True False 14777206.779426182 14036542.391038876 15217362.075936727 14533257.385657746 15046286.250265485 13268695.028085962 14751310.513017714 12804768.638598502 12893969.96539862 12983676.583635734 1.1381373129742745 1.0810914998244907 1.1720379799906806 1.1193483827204276 1.158861756401835 1.0219520597739977 1.136142788061269 0.9862205482488124 0.9930908154050774 1.0 23.630195632904137 -7.111206608460233 1.0841586621194101 0.9826476953253047 1.1281943834167512 0.6190058003176442 0.043156237264068316 0.33512626220829006 0.7135985160724329 0.03439563503119451 0.014812366497004336 7.74093447959026e-08 7.111206608460233 0.14554668809144644 RPDHS(ph)GGSPSPPTSEPAR ddPTM_KYSE-520_SHP099_60min_R1 2 RPDHSGGSPSPPTSEPAR 18 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RPDHS(0.886)GGS(0.108)PS(0.005)PPTSEPAR;RPDHS(0.368)GGS(0.368)PS(0.265)PPTSEPAR 57.39 0.025571 831210000.0 572650.0 626800.0 599050.0 762000.0 587380.0 579390.0 504882.0 449420.0 668450.0 554357.0 True False 540883.9629505273 596687.5871540192 637665.72151389 834420.2508963468 633603.4642649663 575773.8120961917 555920.3997334784 447861.06691541703 547076.3302532205 549445.8282632201 0.9844172712353525 1.085980739976002 1.1605615853514257 1.5186579057919527 1.1531682136303876 1.047917342308692 1.0117838213290729 0.8151141457040285 0.9956874765661803 1.0 19.067617722401888 -6.545400174744535 2.1770148037141452 0.9353683235279268 1.191268946571913 0.3740583913164035 0.13765376047238215 0.34685307536304083 3.3142909386604344 0.06572581687994869 0.04994417702391078 2.8483924454410936e-07 6.545400174744535 0.2559006230439863 RPDHSGGS(ph)PS(ph)PPT(ph)SEPAR ddPTM_KYSE-520_SHP099_60min_R1 2 RPDHSGGSPSPPTSEPAR 18 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 3 RPDHS(0.034)GGS(0.967)PS(0.998)PPT(0.634)S(0.368)EPAR;RPDHS(0.1)GGS(0.901)PS(0.999)PPT(0.533)S(0.467)EPAR 102.21 0.0003861 1258350000.0 575430.0 514420.0 519790.0 449270.0 456730.0 469970.0 512920.0 523170.0 575080.0 510710.0 True False 543509.7508087335 489706.4910398384 553296.495093406 491968.4857220488 492672.0525617798 467036.74290348013 564770.9592167997 521355.2453787963 470659.9685870638 506185.5067263675 1.0737362954616214 0.967444710550677 1.0930705991005498 0.9719134174815398 0.97330335621029 0.9226592557418869 1.1157390950786392 1.029968733697129 0.9298171566209855 1.0 18.949306674747252 -4.238771126938562 21.959935694769243 1.003700112312431 1.073736700035562 0.1148808473844446 0.0604306828356832 2555.6263085055634 2475562.585643831 0.015073389079972509 0.5987949411539382 5.770704992514812e-05 4.238771126938562 0.07003658772313104 RPDHSGGS(ph)PS(ph)PPTSEPAR ddPTM_KYSE-520_SHP099_60min_R1 6 RPDHSGGSPSPPTSEPAR 18 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 2 RPDHS(0.012)GGS(0.983)PS(0.973)PPT(0.013)S(0.019)EPAR;RPDHS(0.103)GGS(0.9)PS(0.983)PPT(0.012)S(0.003)EPAR;RPDHS(0.003)GGS(0.997)PS(0.969)PPT(0.014)S(0.017)EPAR;RPDHS(0.01)GGS(0.99)PS(0.835)PPT(0.126)S(0.039)EPAR;RPDHS(0.07)GGS(0.93)PS(0.975)PPT(0.012)S(0.013)EPAR;RPDHS(0.01)GGS(0.99)PS(0.996)PPT(0.002)S(0.002)EPAR 112.88 3.7247e-05 8626710000.0 912567.0 855601.0 860318.0 773499.0 782660.0 815120.0 764298.0 811221.0 954335.0 849851.0 True False 861945.0893527868 814496.6436767164 915775.4748374699 847012.1123990462 844250.8892737542 810032.5337265873 841560.7006696578 808407.063691405 781051.8208275974 842321.9813140737 1.0232964453902769 0.9669659129707763 1.0872035814722587 1.0055680976978134 1.0022899888670498 0.9616661463148417 0.9990962118271824 0.9597363972744017 0.9272604041617303 1.0 19.684012289737012 -6.031053999107494 2.1460990723392346 0.9682986251922666 1.0220558096661643 0.343046666764215 0.03362406696294817 0.37502472407220433 3.4532038788803674 0.01231926440598086 0.01320979596145517 9.309921110022504e-07 6.031053999107494 0.05375718447389766 RPDHSGGS(ph)PSPPTSEPAR ddPTM_KYSE-520_SHP099_60min_R1 8 RPDHSGGSPSPPTSEPAR 18 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RPDHS(0.101)GGS(0.893)PS(0.004)PPT(0.001)S(0.001)EPAR;RPDHS(0.03)GGS(0.967)PS(0.003)PPTSEPAR;RPDHS(0.001)GGS(0.998)PS(0.001)PPTSEPAR;RPDHS(0.021)GGS(0.978)PS(0.001)PPTSEPAR;RPDHS(0.024)GGS(0.975)PSPPTSEPAR;RPDHS(0.059)GGS(0.937)PS(0.004)PPTSEPAR;RPDHS(0.009)GGS(0.991)PSPPTSEPAR;RPDHS(0.01)GGS(0.988)PS(0.002)PPTSEPAR 192.58 9.7775e-13 5759260000.0 1012983.0 1150431.0 1071714.0 1324281.0 933064.0 875221.0 903352.0 847623.0 1073570.0 911086.0 True False 956790.813658453 1095162.5679278628 1140798.3992430286 1450140.268080399 1006490.8283920573 869758.4210922549 994671.6360259181 844682.7936496953 878636.7504973465 903014.486854182 1.0595520089512747 1.2127851588993486 1.2633223673046607 1.6058881548315254 1.1145899019830283 0.9631721680592515 1.1015013053567289 0.9354033694324264 0.9730040473195952 1.0 19.78438960715406 -5.992431914397736 24.998285058548813 1.0018838266858028 1.2888268101768912 0.5157235178953731 0.13274302856021059 156.28327031871083 516217.6676655096 0.04306888120857619 0.04874429137051863 1.0175788824614403e-06 5.992431914397736 0.2869429834910884 RPDLLTMVVDYR ddPTM_KYSE-520_SHP099_60min_R1 1 RPDLLTMVVDYR 12 1 Q15121-2;Q15121;B1AKZ5 Q15121-2 PEA15 Astrocytic phosphoprotein PEA-15 0 106.58 0.0014138 414140000.0 238530.0 173410.0 123000.0 98289.0 177660.0 160810.0 125590.0 130830.0 128580.0 101010.0 False True 225298.26540223384 165079.1233062832 130928.77680695847 107630.35700833453 191640.83125287536 159806.3251405591 138285.86284028276 130376.18126595148 105233.11323802701 100115.1299845909 2.25039177831473 1.6488928629637816 1.3077821187178225 1.0750658469394219 1.9142044891953047 1.5962255172135873 1.3812683743362952 1.3022625180231817 1.0511209769614627 1.0 16.61130049360843 -4.339555100553625 2.5052815168485463 1.3638406546146764 2.364345672227009 0.5347767142424473 0.2611488656689678 0.35549738671939607 3.167281551832399 0.07114460076046179 0.7008161930504341 4.57556679288558e-05 4.339555100553625 1.0005050176123325 RPDPDS(ph)DEDEDYER ddPTM_KYSE-520_SHP099_60min_R1 15 RPDPDSDEDEDYER 14 1 Q5W012;Q96I25;Q5W011;Q5W010;H0Y6J6 Q5W012 RBM17 Splicing factor 45 1 RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER;RPDPDS(1)DEDEDYER 264.0 1.074e-24 23532029000.0 8995663.0 9089829.0 9509586.0 7404894.0 7782589.0 8410900.0 7904609.0 8567361.0 9815540.0 7753439.0 True False 8496655.64098039 8653139.970728515 10122589.129435578 8108652.899397437 8395034.477425877 8358404.453235063 8703684.019269558 8537642.824328097 8033285.365627501 7684749.5625442555 1.1056515989009446 1.126014569544885 1.3172308410378706 1.0551616332325653 1.0924278545580166 1.0876612679708166 1.1325917583172294 1.1109851732762865 1.0453542174987747 1.0 22.873566814176765 RPDPDS(ph)DEDEDYERER ddPTM_KYSE-520_SHP099_60min_R1 7 RPDPDSDEDEDYERER 16 2 Q5W012;Q96I25;Q5W011;Q5W010;H0Y6J6 Q5W012 RBM17 Splicing factor 45 1 RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER;RPDPDS(1)DEDEDYERER 216.82 4.9322999999999996e-18 7187310000.0 3021962.0 3372090.0 3276982.0 2320564.0 2976083.0 2780457.0 2344345.0 2436841.0 3731287.0 2428724.0 True False 2854327.743728103 3210089.734789717 3488221.503076584 2541109.704856994 3210283.800504053 2763103.1365048457 2581334.2712023486 2428388.1673339657 3053779.3388907923 2407207.394878681 1.1857423460066914 1.3335326825678433 1.4490739395773518 1.0556255810210577 1.3336133011779179 1.1478458991042197 1.072335635348297 1.0087988980510556 1.2685983540045986 1.0 21.198929013036615 -6.274048910063557 1.1720709779784082 1.0830957432343415 1.291351315749613 0.3305390702548686 0.12051613238526825 0.553284713839181 1.5673188999087537 0.061647312864250244 0.05491541774788785 5.320483368306788e-07 6.274048910063557 0.2082555725152715 RPDS(ph)PTRPTLR ddPTM_KYSE-520_SHP099_60min_R1 12 RPDSPTRPTLR 11 2 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 RPDS(0.993)PT(0.007)RPTLR;RPDS(0.991)PT(0.007)RPT(0.002)LR;RPDS(0.862)PT(0.112)RPT(0.026)LR;RPDS(0.986)PT(0.006)RPT(0.008)LR;RPDS(0.989)PT(0.01)RPT(0.001)LR;RPDS(0.973)PT(0.027)RPTLR;RPDS(0.993)PT(0.006)RPT(0.001)LR;RPDS(0.992)PT(0.007)RPTLR;RPDS(0.992)PT(0.007)RPT(0.001)LR;RPDS(0.978)PT(0.021)RPT(0.001)LR;RPDS(0.902)PT(0.085)RPT(0.013)LR;RPDS(0.986)PT(0.005)RPT(0.008)LR 141.34 5.6729e-05 162871560000.0 14164655.0 12117931.0 12510103.0 11268039.0 11566733.0 12101271.0 11234921.0 11618437.0 13760623.0 12192482.0 True False 13378913.350610308 11535767.405374737 13316524.256252512 12338950.03870053 12476969.081391785 12025742.478950435 12370656.45694254 11578135.353810567 11262040.74027687 12084466.095087448 1.107116627688589 0.9545947098204226 1.1019538762797239 1.0210587659902106 1.0324799609031876 0.9951405700777393 1.023682499466934 0.9581006941231178 0.9319435920181108 1.0 23.526650398880204 -6.773384273786339 1.0363200476026722 0.9602535368734748 1.0427850565327774 0.3482045164946641 0.044813417886231506 0.5952077319129964 1.2603162414639375 0.030874877711826836 0.017351546706441456 1.685061384342448e-07 6.773384273786339 0.08253151965930261 RPDTTESLNSS(ph)LSNGTSDADLFDSHDDRDDDAEAGSVEEHK ddPTM_KYSE-520_SHP099_60min_R1 1 RPDTTESLNSSLSNGTSDADLFDSHDDRDDDAEAGSVEEHK 41 2 Q96SU4-5;Q96SU4-4;Q96SU4-3;Q96SU4-7;Q96SU4-2;Q96SU4;Q96SU4-6 Q96SU4-5 OSBPL9 Oxysterol-binding protein-related protein 9 1 RPDT(0.002)T(0.002)ES(0.002)LNS(0.034)S(0.951)LS(0.008)NGTSDADLFDSHDDRDDDAEAGSVEEHK 169.2 8.0617e-11 780500000.0 89931.0 110950.0 83163.0 111020.0 60568.0 83446.0 88461.0 92960.0 100840.0 76302.0 True False 84942.34815699607 105619.79546065479 88523.82004550478 121571.30742062001 65334.35701522091 82925.18256127795 97403.50117616248 92637.54345702709 82529.99796953378 75626.02364205765 1.1231894005036298 1.3966064903869517 1.1705470654452645 1.6075327191076982 0.8639136882887324 1.0965164974661055 1.2879627472836452 1.2249426717909424 1.0912909868189427 1.0 16.20659514466967 -8.853722650169361 0.15355592349809596 0.8405122290616245 1.3544790778639821 0.1332419873400127 0.1846697885373244 28.18448188478214 1.6443703407774926 3.6417611215616894 1.4608664392121662 1.4004814147105897e-09 8.853722650169361 0.5139668488023577 RPDYAPMES(ph)S(ph)DEEDEEFQFIK ddPTM_KYSE-520_SHP099_60min_R1 15 RPDYAPMESSDEEDEEFQFIK 21 1 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 2 RPDY(0.003)APMES(0.998)S(0.999)DEEDEEFQFIK;RPDYAPMES(1)S(1)DEEDEEFQFIK;RPDYAPMES(1)S(1)DEEDEEFQFIK;RPDY(0.001)APMES(0.999)S(0.999)DEEDEEFQFIK;RPDYAPMES(1)S(1)DEEDEEFQFIK;RPDYAPMES(1)S(1)DEEDEEFQFIK;RPDYAPMES(1)S(1)DEEDEEFQFIK;RPDY(0.002)APMES(0.999)S(0.999)DEEDEEFQFIK;RPDYAPMES(1)S(1)DEEDEEFQFIK;RPDY(0.002)APMES(0.999)S(0.998)DEEDEEFQFIK;RPDYAPMES(1)S(1)DEEDEEFQFIK;RPDY(0.001)APMES(1)S(1)DEEDEEFQFIK;RPDY(0.002)APMES(0.999)S(0.999)DEEDEEFQFIK;RPDY(0.021)APMES(0.99)S(0.99)DEEDEEFQFIK;RPDY(0.223)APMES(0.924)S(0.852)DEEDEEFQFIK 240.34 1.2046999999999999e-26 25243413000.0 4846259.0 4346059.0 4036909.0 4212385.0 4248113.0 4478221.0 4322035.0 4757440.0 5199204.0 4564870.0 True False 4577427.3524921965 4137267.8020724496 4297134.613422778 4612728.8039002735 4582415.324643399 4450270.761627264 4758948.476796731 4740937.551034838 4255159.614867032 4524428.803215114 1.011713865237402 0.9144287559862709 0.9497628983285541 1.0195162758716443 1.0128163186891301 0.9836094135164305 1.0518340952597076 1.047853277670293 0.9404854844534769 1.0 22.109304236705746 -5.25893026768301 24.694616401467158 1.011019071755392 0.9542145275737824 0.2651524281607357 0.03722183853673389 222.52912701245478 2190108.5836459203 0.010067183423126003 0.01646346843471223 5.508961437198922e-06 5.25893026768301 -0.05680454418160952 RPDYAPMES(ph)S(ph)DEEDEEFQFIKK ddPTM_KYSE-520_SHP099_60min_R1 16 RPDYAPMESSDEEDEEFQFIKK 22 2 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 2 RPDYAPMES(1)S(1)DEEDEEFQFIKK;RPDYAPMES(1)S(1)DEEDEEFQFIKK;RPDY(0.003)APMES(0.999)S(0.999)DEEDEEFQFIKK;RPDYAPMES(1)S(1)DEEDEEFQFIKK;RPDY(0.035)APMES(0.967)S(0.998)DEEDEEFQFIKK;RPDY(0.006)APMES(0.998)S(0.997)DEEDEEFQFIKK;RPDYAPMES(1)S(1)DEEDEEFQFIKK;RPDYAPMES(1)S(1)DEEDEEFQFIKK;RPDY(0.015)APMES(0.988)S(0.997)DEEDEEFQFIKK;RPDY(0.075)APMES(0.962)S(0.962)DEEDEEFQFIKK;RPDYAPMES(1)S(1)DEEDEEFQFIKK;RPDYAPMES(1)S(1)DEEDEEFQFIKK;RPDY(0.002)APMES(0.998)S(0.999)DEEDEEFQFIKK;RPDYAPMES(1)S(1)DEEDEEFQFIKK;RPDY(0.008)APMES(0.996)S(0.996)DEEDEEFQFIKK;RPDYAPMES(1)S(1)DEEDEEFQFIKK 221.69 7.1563e-20 19546750000.0 15922446.0 15603035.0 15161987.0 12837664.0 13050572.0 13742269.0 11731846.0 12377638.0 18472570.0 12642995.0 True False 15039196.179770818 14853441.777966997 16139352.942056933 14057751.726775581 14077577.768802771 13656498.401735147 12917815.485463174 12334702.862740433 15118416.943594491 12530987.900401263 1.2001604581622203 1.185336854206951 1.2879553527890746 1.121839063169587 1.1234212243036308 1.089818177966467 1.0308696798797103 0.9843360284742958 1.2064824468556365 1.0 23.578996820517585 -5.745710521484026 1.4960767953924152 1.0592412632144423 1.2193239200707657 0.5179043477848528 0.06512161299238958 0.3141401771925525 1.4627926499782165 0.02373393855007821 0.033047983838459034 1.7959303033627429e-06 5.745710521484026 0.1600826568563234 RPEAS(ph)PVQK ddPTM_KYSE-520_SHP099_60min_R1 5 RPEASPVQK 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RPEAS(1)PVQK;RPEAS(1)PVQK;RPEAS(1)PVQK;RPEAS(1)PVQK;RPEAS(1)PVQK 129.37 0.00038627 4196990000.0 6189640.0 5149490.0 5247010.0 5314920.0 5571930.0 5099770.0 5690540.0 6077740.0 5531580.0 5523270.0 True False 5846288.330458564 4902100.770857933 5585240.660112826 5820048.39881104 6010409.191055014 5067940.443766365 6265795.3175184475 6056657.738495176 4527184.51178415 5474338.124839039 1.067944324434739 0.8954691250464308 1.0202586198997432 1.0631510633958452 1.0979243616289662 0.9257631385192118 1.1445758691974621 1.1063726062177168 0.826982990188839 1.0 22.384253115456207 -3.920374112336072 20.783479939848707 1.0165574214003374 3.38951802578099 0.027489700595402344 0.09611416451667731 3371.66640674971 805649.1537344813 0.022803918834618523 31670.512114997025 0.0001201229219334375 3.920374112336072 2.3729606043806526 RPEAS(ph)PVQKK ddPTM_KYSE-520_SHP099_60min_R1 4 RPEASPVQKK 10 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RPEAS(1)PVQKK;RPEAS(1)PVQKK;RPEAS(1)PVQKK;RPEAS(1)PVQKK 101.36 0.0012072 5227430000.0 6987300.0 6528400.0 6758400.0 5477870.0 5874230.0 5354320.0 5179340.0 5346600.0 7312900.0 5646080.0 True False 6599700.540162781 6214765.864671826 7194057.277822332 5998485.11781833 6336498.481203288 5320901.702795835 5702918.232687238 5328053.892505819 5985061.703207092 5596060.12378377 1.1793476828659233 1.1105609530995746 1.2855575384629854 1.0719121998572205 1.1323142248369682 0.9508299741422566 1.019095239604255 0.9521080500656346 1.0695134739117669 1.0 22.415980032151843 -5.9278318758357695 1.7323317169502854 0.9972844242915538 1.1768682225435871 0.6204719671212808 0.06130877906800921 0.22387852241770578 1.3748233760300306 0.021766559304630815 0.025396837412188566 1.1807776500596197e-06 5.9278318758357695 0.1795837982520333 RPEGPGAQAPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 6 RPEGPGAQAPSSPR 14 1 P40222 P40222 TXLNA Alpha-taxilin 1 RPEGPGAQAPS(0.5)S(0.5)PR;RPEGPGAQAPS(0.5)S(0.5)PR;RPEGPGAQAPS(0.5)S(0.5)PR;RPEGPGAQAPS(0.5)S(0.5)PR;RPEGPGAQAPS(0.5)S(0.5)PR;RPEGPGAQAPS(0.5)S(0.5)PR 163.91 3.8022e-08 24265931000.0 4478385.0 3997556.0 4143512.0 3555812.0 4005638.0 4247487.0 4302093.0 4076304.0 5106819.0 4457910.0 True False 4229960.05661083 3805507.409306117 4410609.413373603 3893755.3033861346 4320858.921637426 4220976.858107694 4736990.544821572 4062164.2528405027 4179549.402030707 4418416.385601494 0.9573475398097844 0.861283110778628 0.998233083633011 0.8812558535847599 0.9779202647622837 0.9553144135221828 1.0721014344094482 0.9193710819283742 0.945938326602899 1.0 22.07509795205903 -5.806763064233908 23.16109435818479 0.9779363503102279 0.9252768058569693 0.20702482534291378 0.05167550003376232 100.23480380392655 51220.485020700486 0.01567591725360223 0.017774985150242544 1.5604035718540716e-06 5.806763064233908 -0.0526595444532586 RPEGPGAQAPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 RPEGPGAQAPSSPR 14 1 P40222 P40222 TXLNA Alpha-taxilin 1 RPEGPGAQAPS(0.068)S(0.932)PR;RPEGPGAQAPS(0.015)S(0.985)PR;RPEGPGAQAPS(0.05)S(0.95)PR;RPEGPGAQAPS(0.012)S(0.988)PR;RPEGPGAQAPS(0.111)S(0.889)PR;RPEGPGAQAPS(0.004)S(0.996)PR;RPEGPGAQAPS(0.334)S(0.666)PR;RPEGPGAQAPS(0.001)S(0.999)PR;RPEGPGAQAPS(0.003)S(0.997)PR 217.65 1.5286e-13 275246300000.0 30193550.0 28311440.0 29603460.0 26700690.0 27655800.0 29191400.0 29586630.0 31187300.0 35887110.0 31190930.0 True False 28518653.59215028 26951315.9260622 31511746.39881074 29238315.5497448 29832154.120022926 29009205.64459994 32577535.298082612 31079118.53547058 29370915.46442319 30914602.62637636 0.9224978220427825 0.8717988793770656 1.0193159129247515 0.9457768519010058 0.9649858508797429 0.9383657941586888 1.053791170852296 1.0053216245760135 0.9500660842835452 1.0 24.881785125651987 -4.0613649288878 0.49557378352075243 0.9950727127253466 0.8127463114029716 0.30991323080482813 0.04189280830607149 6.446066255751461 1.0556539852041686 0.026436645686162427 0.7157471422324557 8.682305660633692e-05 4.0613649288878 -0.182326401322375 RPEGPGAQAPSSPR ddPTM_KYSE-520_SHP099_60min_R1 1 RPEGPGAQAPSSPR 14 1 P40222 P40222 TXLNA Alpha-taxilin 0 172.57 4.8556e-08 326770000.0 153510.0 126130.0 139510.0 99314.0 147290.0 133740.0 154310.0 131780.0 215250.0 167170.0 False True 144994.49428540183 120070.52547501026 148503.03782389217 108752.77270015713 158880.88503453776 132905.27905166577 169909.16072047173 131322.88593768308 176166.0260109295 165689.0038562919 0.8751002837289119 0.7246740742020019 0.896275759812608 0.6563668690680424 0.9589102555794283 0.8021369913415579 1.0254703496668984 0.7925866103437027 1.0632330565746215 1.0 17.338118334036587 -6.8687908920678025 0.6326023693064646 1.0007392229060716 0.7938680421089823 0.3182541040759306 0.10557417554548455 0.9132334296240483 0.7307271642786685 0.0888119217238809 0.05858105460056985 1.3527237277520328e-07 6.8687908920678025 -0.20687118079708933 RPELEDSTLR ddPTM_KYSE-520_SHP099_60min_R1 1 RPELEDSTLR 10 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 90.434 0.0088223 393620000.0 714340.0 717570.0 660350.0 550900.0 698650.0 585360.0 621990.0 525270.0 643460.0 608460.0 False True 674714.1361985138 683096.860105472 702917.2175973569 603257.3703658757 753629.7802252683 581706.5511117323 684866.8192374188 523447.9609689399 526623.8843065862 603069.5177747161 1.1187999331953657 1.1327000287231415 1.1655658209870592 1.0003114940908515 1.2496565619932325 0.9645762784665163 1.1356349459752648 0.8679728381902402 0.8732391022676641 1.0 19.201964790273728 -7.260152846022627 24.999715941565476 0.9029544688080987 1.1082517488536339 0.5391461636697995 0.08279936323459507 80.79180249078009 1569974.486849545 0.03909079055919225 0.020937597580882893 5.493475019373997e-08 7.260152846022627 0.20529728004553516 RPENPKPQDGK ddPTM_KYSE-520_SHP099_60min_R1 3 RPENPKPQDGK 11 2 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 0 ;; 114.72 0.00017981 2043340000.0 2761670.0 2650170.0 1985340.0 2008960.0 2956570.0 2636480.0 2201160.0 2891110.0 2505060.0 2337740.0 False True 2608474.65984734 2522851.8552137334 2113318.1930563156 2199890.954384151 3189235.238417842 2620024.7503674 2423674.7340514087 2881081.4142001495 2050204.2514236444 2317029.442334199 1.1257839940175884 1.0888302967234578 0.9120808542369395 0.9494445405786293 1.3764327634978062 1.130768864001987 1.046026731369358 1.2434375504947055 0.8848416916783965 1.0 21.143844945870313 -3.3497695203388975 2.6721126730914504 1.0805533946556514 3.7393784941223265 0.008582011909199605 0.14430399353115364 1065.5311276835894 145.52478049431303 0.038024964242755165 16557.337056982233 0.00044692070961431903 3.3497695203388975 2.658825099466675 RPENSLLEETLHFDHAVR ddPTM_KYSE-520_SHP099_60min_R1 1 RPENSLLEETLHFDHAVR 18 1 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 0 191.21 1.7087e-12 627100000.0 242850.0 156490.0 159000.0 129210.0 201800.0 156180.0 164240.0 116260.0 136050.0 106880.0 False True 229378.62639052738 148971.98550372114 169249.39440899505 141490.07955159704 217680.51191506392 155205.2226879705 180842.98202793245 115856.72119528808 111346.7495414029 105933.1263513818 2.1653153672598595 1.4062832905504816 1.5977003628458224 1.3356547137320605 2.0548861287546103 1.465124536900312 1.7071428764225605 1.0936779191335255 1.0511041576556897 1.0 16.69279427953368 -7.286540082695023 6.310745123555258 1.04868828323027 1.6564188481815456 0.5671050904681485 0.2509786990588004 0.13947679329798873 20.83612434233577 0.13038534385314998 0.06406815931322311 5.169635432286396e-08 7.286540082695023 0.6077305649512756 RPEPSTLENITDDKYAT(ph)VSSPSK ddPTM_KYSE-520_SHP099_60min_R1 1 RPEPSTLENITDDKYATVSSPSK 23 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 RPEPSTLENITDDKYAT(0.417)VS(0.286)S(0.286)PS(0.011)K 124.17 0.00025014 403050000.0 180950.0 162900.0 151960.0 123580.0 146630.0 118290.0 142320.0 161120.0 179160.0 125030.0 True False 170912.34278511812 155074.03948211507 161755.58474459662 135325.0060443182 158168.946789424 117551.70823255248 156707.09450934833 160561.11232569074 146629.0602560658 123922.33147186815 1.379189212752322 1.2513809064132944 1.3052981074788532 1.0920146872401169 1.2763554793619278 0.9485918061446263 1.264558959213277 1.2956592279910424 1.1832335505191196 1.0 16.91907666676328 -4.732566607405726 1.2324904606706526 1.1652722021050135 1.375380688044621 0.27675689512972446 0.11413986524777238 1.0669892713874112 2.411501904633852 0.03607521179159963 0.23415778021437592 1.8511149683751684e-05 4.732566607405726 0.21010848593960763 RPEPSTLENITDDKYATVS(ph)SPSK ddPTM_KYSE-520_SHP099_60min_R1 4 RPEPSTLENITDDKYATVSSPSK 23 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 RPEPSTLENITDDKY(0.028)AT(0.162)VS(0.398)S(0.398)PS(0.013)K;RPEPSTLENITDDKYAT(0.244)VS(0.737)S(0.019)PSK;RPEPSTLENITDDKYAT(0.121)VS(0.434)S(0.434)PS(0.011)K;RPEPSTLENITDDKYAT(0.004)VS(0.882)S(0.114)PSK 242.48 1.7650999999999999e-28 23719410000.0 4719460.0 4287080.0 4052460.0 4128250.0 4183400.0 4319950.0 3921400.0 4314220.0 4730300.0 3931740.0 True False 4457662.145789734 4081122.241761732 4313688.055765255 4520597.638796377 4512609.779709996 4292987.589645913 4317813.381175926 4299254.97776652 3871396.7611591164 3896907.8424474294 1.1438972452040659 1.0472719414371903 1.106951519042357 1.1600473558946784 1.1579975616964753 1.1016394955210764 1.1080101341232 1.1032477932725242 0.9934535066468775 1.0 21.893898383095383 -7.73328502929408 4.842469603106008 0.9944790218178252 1.116454813500973 0.704143109043394 0.031034436971779992 0.10446345901683836 5.825532279900416 0.02675044285232405 0.008537773792215457 1.8480553343952672e-08 7.73328502929408 0.12197579168314787 RPEPSTLENITDDKYATVSS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 3 RPEPSTLENITDDKYATVSSPSK 23 2 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 RPEPSTLENITDDKYATVS(0.008)S(0.99)PS(0.002)K;RPEPSTLENITDDKYAT(0.005)VS(0.086)S(0.906)PS(0.003)K;RPEPSTLENITDDKYAT(0.001)VS(0.455)S(0.523)PS(0.021)K 251.13 5.779e-29 10830200000.0 3809120.0 3301840.0 3103030.0 3234610.0 3411440.0 3221310.0 3230310.0 3336980.0 4053920.0 3534380.0 True False 3597820.5203075316 3143214.6502371193 3303056.278823545 3542026.3618790447 3679900.919561575 3201204.6094057304 3556861.2595875002 3325404.795236984 3317830.3190068617 3503068.142906027 1.02704839687272 0.8972747665792236 0.9429038043443373 1.0111211707519625 1.0504793996124933 0.913828814860027 1.0153560006505749 0.9492835022268052 0.9471212616076894 1.0 21.740187621545342 -5.234145224621831 24.1959353086676 0.9829382621026815 0.9498955606278825 0.06418982481123081 0.04760263050213582 1299.8448461395526 1152292.9808609467 0.012803397349506192 0.022168617497070053 5.832500374858443e-06 5.234145224621831 -0.03304270147479904 RPES(ph)FTTPEGPKPR ddPTM_KYSE-520_SHP099_60min_R1 1 RPESFTTPEGPKPR 14 2 F8W8D3;Q14493;H7C4H8 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 RPES(0.363)FT(0.273)T(0.363)PEGPKPR 72.184 0.012312 4354900000.0 1033100.0 718570.0 656270.0 770050.0 958170.0 866730.0 790000.0 740910.0 909180.0 884390.0 True False 975791.8835662069 684048.8186044411 698574.2142691264 843235.320476026 1033572.5277584578 861320.4165728308 869860.9096570051 738339.9561396943 744095.8305626796 876554.992645008 1.1132123959750102 0.7803832324773158 0.7969542357646907 0.9619879272281141 1.1791302729788222 0.9826199426162563 0.9923631910785158 0.8423201765262334 0.8488866492190839 1.0 19.74148507897265 -3.72165005942137 6.254734238869847 0.9351213537827582 10.927829182834424 0.18616643722416437 0.11362958843901176 5251.699735282004 2151.17786482381 0.031367092131359055 728796.771056633 0.00018982348419665533 3.72165005942137 9.992707829051666 RPES(ph)PPSILTPPVVPTADK ddPTM_KYSE-520_SHP099_60min_R1 2 RPESPPSILTPPVVPTADK 19 1 Q6P2C6;P55198 Q6P2C6 MLLT6 Protein AF-17 1 RPES(0.71)PPS(0.286)ILT(0.004)PPVVPTADK;RPES(0.989)PPS(0.011)ILTPPVVPTADK 138.25 2.1754e-06 719400000.0 1132840.0 1070320.0 856970.0 760530.0 793250.0 1070870.0 896930.0 1105770.0 1168500.0 1131920.0 True False 1069999.1069394466 1018900.2206169262 912211.657400481 832810.5425383177 855674.2620248972 1064186.3031109422 987600.437593239 1101934.3419586592 956329.8554879042 1121892.0694204343 0.9537451383288631 0.9081980775060534 0.8131010836646047 0.7423267934931966 0.7627064005069004 0.9485638878441287 0.8802989739498115 0.9822106528731546 0.8524258986712875 1.0 20.097502458816628 -6.282279170782594 24.820302195609464 0.9283129980664687 0.8335476858644466 0.31606269783612606 0.07091981159840133 1040.2679472564068 1238960.3691652897 0.02681267486332741 0.023671280721158892 5.220604930699419e-07 6.282279170782594 -0.09476531220202211 RPES(ph)PSEIS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 10 RPESPSEISPIK 12 1 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 2 RPES(0.985)PS(0.017)EIS(0.998)PIK;RPES(0.998)PS(0.002)EIS(1)PIK;RPES(0.998)PS(0.004)EIS(0.998)PIK;RPES(0.964)PS(0.036)EIS(1)PIK;RPES(0.934)PS(0.117)EIS(0.949)PIK;RPES(0.999)PS(0.001)EIS(1)PIK;RPES(1)PSEIS(1)PIK;RPES(0.984)PS(0.016)EIS(1)PIK;RPES(1)PSEIS(1)PIK;RPES(0.994)PS(0.011)EIS(0.995)PIK 190.55 5.6513e-08 10413310000.0 18316880.0 15914610.0 14329050.0 16274320.0 16537260.0 16972940.0 17132240.0 17829250.0 17551780.0 16860650.0 True False 17300806.152604997 15150048.247283366 15252723.490290627 17821026.479747284 17838648.277861793 16867005.585667584 18864134.01374956 17767404.49312823 14364819.196367523 16711277.75838719 1.0352772781795174 0.9065762933465539 0.9127203623095468 1.0664071734911549 1.067461658873379 1.0093187265230055 1.1288265497401524 1.0631984429922472 0.8595883213752457 1.0 23.994318711507244 -5.2627964084911385 24.974028853545683 1.0355503335816802 0.9470298089774181 0.17614490689494822 0.07412903962540211 179.47652734214378 3303020.970614899 0.020707888310566157 0.03265662878913433 5.460137651355394e-06 5.2627964084911385 -0.08852052460426219 RPES(ph)PSEIS(ph)PIKGSVR ddPTM_KYSE-520_SHP099_60min_R1 9 RPESPSEISPIKGSVR 16 2 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 2 RPES(0.995)PS(0.083)EIS(0.785)PIKGS(0.137)VR;RPES(0.998)PS(0.073)EIS(0.908)PIKGS(0.021)VR;RPES(0.955)PS(0.105)EIS(0.936)PIKGS(0.005)VR;RPES(1)PS(0.005)EIS(0.995)PIKGSVR;RPES(0.999)PS(0.008)EIS(0.993)PIKGSVR;RPES(1)PS(0.11)EIS(0.89)PIKGSVR;RPES(0.929)PS(0.091)EIS(0.974)PIKGS(0.006)VR;RPES(0.874)PS(0.166)EIS(0.942)PIKGS(0.018)VR;RPES(0.735)PS(0.291)EIS(0.959)PIKGS(0.015)VR 203.89 4.1975e-12 16345700000.0 17415970.0 16410090.0 15148050.0 13940410.0 15140270.0 14833630.0 14008380.0 14193620.0 18149870.0 15189360.0 True False 16449871.426224552 15621724.64435275 16124517.54073694 15265302.375062885 16331723.112647599 14741047.812914332 15424483.759013934 14144385.645035805 14854311.128989508 15054794.087543264 1.092666650275583 1.0376578087692732 1.0710553360592818 1.0139828074894628 1.0848187638887004 0.9791597100030393 1.024556275517349 0.9395270079940347 0.9866831151998525 1.0 23.84371963989872 -6.272685676040322 24.903598715431635 0.9846163460196616 1.0568466695191585 0.6198152170896226 0.028934182285372593 472.98523382126285 1047367.5241595426 0.009790593234149679 0.008708369650303053 5.337210404264929e-07 6.272685676040322 0.07223032349949687 RPES(ph)PSEISPIK ddPTM_KYSE-520_SHP099_60min_R1 9 RPESPSEISPIK 12 1 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 RPES(0.805)PS(0.195)EISPIK;RPES(0.886)PS(0.112)EIS(0.001)PIK;RPES(0.984)PS(0.016)EISPIK;RPES(0.997)PS(0.003)EISPIK;RPES(0.976)PS(0.024)EISPIK;RPES(0.958)PS(0.036)EIS(0.006)PIK;RPES(0.971)PS(0.028)EISPIK;RPES(0.908)PS(0.091)EIS(0.001)PIK;RPES(0.79)PS(0.209)EIS(0.001)PIK 230.5 1.1290999999999998e-11 29492270000.0 13521150.0 10729130.0 9966040.0 9088820.0 10206220.0 10846030.0 9988950.0 10305100.0 12194490.0 10288460.0 True False 12771104.855755728 10213686.490047539 10608466.884627791 9952618.720146626 11009391.448551837 10778335.903639449 10998730.548757395 10269354.013328424 9980278.014076754 10197312.248700766 1.2523991169715223 1.0016057408998984 1.04031990252916 0.976004115340754 1.0796365924711717 1.0569781174458701 1.0785911307323885 1.0070647797057344 0.9787165255578337 1.0 23.28168560891374 -4.25733334995556 24.97529393483579 1.0279795403221814 1.2523992059360356 0.7787429849997192 0.03642435655832313 193.89827562023234 1179358.105890474 0.009353332570321355 0.07012442823061302 5.529255390963102e-05 4.25733334995556 0.22441966561385418 RPESFTT(ph)PEGPKPR ddPTM_KYSE-520_SHP099_60min_R1 3 RPESFTTPEGPKPR 14 2 F8W8D3;Q14493;H7C4H8 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 RPES(0.16)FT(0.16)T(0.68)PEGPKPR;RPES(0.001)FT(0.316)T(0.683)PEGPKPR;RPES(0.001)FT(0.263)T(0.735)PEGPKPR 77.137 0.010504000000000001 9069100000.0 2507070.0 2350900.0 2305360.0 2129180.0 2381890.0 2594170.0 2256790.0 2014870.0 2387740.0 2726990.0 True False 2367997.8293798626 2237959.235227159 2453967.194306418 2331536.627038693 2569331.1918997583 2577978.822771501 2484928.35734789 2007880.8862441934 1954186.6060271177 2702830.990166119 0.8761176107553521 0.8280056146202511 0.9079247660082491 0.8626276062105512 0.950607419127544 0.9538068906828153 0.9193798526023129 0.7428806660681314 0.7230147253517363 1.0 21.366039871329058 -10.173948067076514 5.068848914499871 1.000008681692111 0.8664214196940578 0.22910978107432856 0.07527456902716262 8.133261441647802e-06 1.3254952795914378e-06 0.08026658240680078 0.019466240871620844 6.699647189913323e-11 10.173948067076514 -0.13358726199805315 RPESPS(ph)EISPIK ddPTM_KYSE-520_SHP099_60min_R1 1 RPESPSEISPIK 12 1 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 RPES(0.326)PS(0.671)EIS(0.003)PIK 136.6 4.4433e-05 772900000.0 332850.0 337030.0 298400.0 226640.0 241110.0 271080.0 229590.0 254860.0 382460.0 285090.0 True False 314386.1469799749 320838.5729076564 317635.3414568814 248179.7974581994 260083.9852717591 269388.08916797943 252799.19778247084 253975.950144771 313014.90503200993 282564.324396664 1.112617976990752 1.1354532232358638 1.1241169320829925 0.8783125682554477 0.9204416935049912 0.9533690770877793 0.8946607053889477 0.8988252522220016 1.1077651281716634 1.0 18.108219801874313 -5.24788192434589 24.11355303226599 0.9428091689049035 1.1252018025353827 0.6124798023936169 0.0630637554829006 308.1566541679935 548091.4706655596 0.01691754781196278 0.029072644070865215 5.650905903297157e-06 5.24788192434589 0.1823926336304792 RPESPSEIS(ph)PIKGSVR ddPTM_KYSE-520_SHP099_60min_R1 2 RPESPSEISPIKGSVR 16 2 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 RPESPSEIS(0.998)PIKGS(0.002)VR;RPESPSEIS(0.991)PIKGS(0.009)VR 156.05 1.4933000000000002e-06 2173600000.0 1686290.0 1585510.0 1462930.0 1143230.0 1224900.0 1169030.0 962880.0 904880.0 1171600.0 1088370.0 True False 1592748.1321642234 1509339.7197009705 1557232.808570762 1251882.2354753662 1321292.6612723581 1161733.6501403383 1060217.3072032114 901741.1824805806 958866.9736325439 1078727.8885390463 1.4765059373048472 1.399184850727383 1.4435825986475321 1.1605171691359792 1.2248618723131601 1.0769478220440831 0.9828403608245408 0.8359301655784908 0.8888867932497475 1.0 20.040899557074173 -5.902372731643413 0.7102303403856949 0.8876525083946366 1.4831701564111552 0.9058269285354728 0.06745642997372212 0.20570620561825612 0.22915674697000973 0.04377530890972805 0.06619539470456058 1.2520661325238918e-06 5.902372731643413 0.5955176480165186 RPET(ph)PSSGPLDEEGAVAPVLANGHAPYSR ddPTM_KYSE-520_SHP099_60min_R1 1 RPETPSSGPLDEEGAVAPVLANGHAPYSR 29 1 A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4;H3BSV5;H3BMG9 A0A0A0MTL6 FAM65A Protein FAM65A 1 RPET(0.811)PS(0.185)S(0.005)GPLDEEGAVAPVLANGHAPYSR 181.32 3.348e-11 190710000.0 219590.0 268190.0 187210.0 166940.0 167200.0 188110.0 186310.0 191830.0 210270.0 188320.0 True False 207408.90495818737 255305.74983860287 199277.856146591 182805.92740765883 180357.68876213423 186935.93571413847 205144.03301037563 191164.5865034588 172090.26847534574 186651.6313107432 1.1112086377262187 1.3678195472803678 1.067645938839009 0.9793963552524119 0.9662797345814212 1.0015231819909571 1.099074417779107 1.0241784931694613 0.9219864153710221 1.0 17.509988592098072 -4.936051122592798 6.706570549044685 1.0042983211723493 1.237914412719538 0.63689072389604 0.07160902643783783 0.12078471140067143 9.975823138948442 0.018151027509443664 0.038241689961544936 1.1586409597263139e-05 4.936051122592798 0.23361609154718876 RPET(ph)WESPEKPK ddPTM_KYSE-520_SHP099_60min_R1 3 RPETWESPEKPK 12 2 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 RPET(0.863)WES(0.137)PEKPK;RPET(0.643)WES(0.357)PEKPK;RPET(0.679)WES(0.321)PEKPK 179.74 1.5413999999999998e-06 3853690000.0 1835990.0 1724510.0 1489840.0 1671620.0 1633510.0 1544700.0 1826850.0 1780510.0 2086080.0 1570380.0 True False 1734143.9747446757 1641661.9510577156 1585877.4702282834 1830490.26220912 1762057.9435994849 1535058.9543226298 2011525.8263378507 1774333.8263841588 1707300.4577973522 1556467.6549371523 1.1141535574118293 1.0547356675548798 1.018895230619051 1.1760541611017494 1.132087735977163 0.9862453289365741 1.2923659672317913 1.1399747503624182 1.0969071232426544 1.0 20.569844165696555 -5.257488580360507 24.945253566634516 1.1258991238221205 1.0618089066102154 0.07633128573253867 0.08443284206279088 800.1595753922685 5052164.398518444 0.022935459066415736 0.0380226832811267 5.527279415641534e-06 5.257488580360507 -0.06409021721190511 RPETWES(ph)PEKPK ddPTM_KYSE-520_SHP099_60min_R1 1 RPETWESPEKPK 12 2 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 RPET(0.021)WES(0.979)PEKPK 152.71 1.0777e-05 2001700000.0 1009100.0 818890.0 739830.0 766400.0 819360.0 707590.0 731880.0 891260.0 818160.0 745460.0 True False 953123.2114090223 779549.2952210511 787520.6255698527 839238.4255734369 883838.9704793186 703173.6683428165 805865.5728604669 888168.4270816478 669602.7681352007 738855.8043591034 1.2899989494374728 1.055076363509448 1.0658651132245782 1.1358622624632517 1.196226605062643 0.9517062249416336 1.0906939731758472 1.2020862823863998 0.9062698894488972 1.0 19.494933308856417 -4.257752984702039 23.945115444791575 1.0766812651080768 1.2899991010416285 0.34096060277238815 0.09210799758028598 235.43599532547782 1529159.088867784 0.02205225692512158 0.15741752085711053 5.5239153574867136e-05 4.257752984702039 0.2133178359335517 RPFDPNDR ddPTM_KYSE-520_SHP099_60min_R1 8 RPFDPNDR 8 1 Q16629;C9JAB2;Q16629-4;Q16629-3;Q16629-2;F8WEA1;A0A0B4J1Z1 Q16629;A0A0B4J1Z1 SRSF7 Serine/arginine-rich splicing factor 7 0 ;;;;;;; 108.57 0.0031359 8285460000.0 2436240.0 2117720.0 1614880.0 2146420.0 2104410.0 2252820.0 1700390.0 1868280.0 1748220.0 2019110.0 False True 2301096.9106759652 2015981.5524374733 1718977.7486993563 2350415.1114552952 2270015.0945449895 2238759.314738854 1872282.0154071862 1861799.3727398303 1430787.317039848 2001222.2562438117 1.1498457522629209 1.007375140940799 0.8589639373318717 1.174489791986873 1.1343143358827559 1.1186959907895921 0.9355692550218587 0.9303311348507233 0.7149567283572791 1.0 20.93244997153758 -7.000186103950459 2.781610979468646 0.8680704390120386 1.0679015016614184 0.39280158574618906 0.10886076591869422 0.2956465281180437 4.603132105902731 0.057980892130077955 0.032999303620336456 9.995715716195852e-08 7.000186103950459 0.19983106264937978 RPGAPS(ph)LSPAPR ddPTM_KYSE-520_SHP099_60min_R1 1 RPGAPSLSPAPR 12 1 Q5QP82-2;Q5QP82 Q5QP82-2 DCAF10 DDB1- and CUL4-associated factor 10 1 RPGAPS(0.776)LS(0.224)PAPR 81.278 0.009003200000000001 372900000.0 244000.0 217870.0 244050.0 179730.0 198600.0 195500.0 200480.0 233040.0 260380.0 209530.0 True False 230464.83359805908 207403.19817046283 259781.85349380635 196811.48516220512 214228.69012057318 194279.8119829572 220746.47489624863 232231.63863194466 213101.55564564822 207673.72721187316 1.109744774614335 0.9986973362252302 1.2509134255040908 0.9476956368265778 1.0315637562666389 0.9355050087041045 1.0629484906920286 1.1182523747696644 1.0261363269521206 1.0 17.66395918691869 -5.300176613997057 24.998259128046314 1.0214406167120933 1.1076767624538142 0.2737092844501795 0.07543239852061838 812.2452901569221 524163.6347697626 0.021373616685235824 0.031702755040613616 5.009834578754542e-06 5.300176613997057 0.0862361457417209 RPGAPSLS(ph)PAPR ddPTM_KYSE-520_SHP099_60min_R1 3 RPGAPSLSPAPR 12 1 Q5QP82-2;Q5QP82 Q5QP82-2 DCAF10 DDB1- and CUL4-associated factor 10 1 RPGAPS(0.404)LS(0.596)PAPR;RPGAPS(0.012)LS(0.988)PAPR;RPGAPS(0.006)LS(0.994)PAPR 112.96 0.00010981 2265140000.0 1215580.0 1168250.0 1140590.0 884260.0 1106700.0 1132150.0 943680.0 1103340.0 1318520.0 1095290.0 True False 1148149.3542013455 1112125.5164210007 1214114.2564085252 968299.8045375365 1193790.9937383595 1125083.831900281 1039076.3838292696 1099512.7710614929 1079110.0051843482 1085586.5827227253 1.0576303838628038 1.0244466301634956 1.1183946778003129 0.8919599965108028 1.0996736812500483 1.0363833247445762 0.9571566196251201 1.0128282612924708 0.9940340294901827 1.0 20.050043364354405 -4.930874817220081 0.41114203906225194 0.9940058306414832 1.0818250782310774 0.10525362461645582 0.05922125850154986 8.120999884926048 1.6133090115976414 0.0508436416657935 0.3334296518179757 1.1725332925328983e-05 4.930874817220081 0.08781924758959425 RPGFS(ph)PTSHR ddPTM_KYSE-520_SHP099_60min_R1 7 RPGFSPTSHR 10 1 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 RPGFS(0.984)PT(0.015)S(0.001)HR;RPGFS(0.977)PT(0.011)S(0.011)HR;RPGFS(0.965)PT(0.032)S(0.003)HR;RPGFS(0.934)PT(0.053)S(0.013)HR;RPGFS(0.828)PT(0.138)S(0.034)HR;RPGFS(0.948)PT(0.043)S(0.009)HR;RPGFS(0.625)PT(0.298)S(0.076)HR 119.87 0.00034264 23868550000.0 5203390.0 4620500.0 4762940.0 4045980.0 4367760.0 4722100.0 4527290.0 4028440.0 4973920.0 4701990.0 True False 4914747.583999197 4398524.244488107 5069966.733373442 4430508.722731751 4711477.862845094 4692627.622325938 4984952.655292486 4014466.2818849687 4070781.5103195505 4660334.026692861 1.054591270893704 0.9438216701409827 1.0878977138407546 0.9506848001356243 1.0109742855038497 1.0069294594439175 1.0696556570280835 0.8614117054467396 0.8734956522436917 1.0 22.152001932225833 -7.26638624301834 24.999951692883574 0.9005902563483338 1.0143835580481786 0.4256400923842837 0.05597416767566869 358.3683483315521 1811068.3460190836 0.02758544990245768 0.013913044022598327 5.415190721761662e-08 7.26638624301834 0.1137933016998448 RPGFSPT(ph)SHR ddPTM_KYSE-520_SHP099_60min_R1 3 RPGFSPTSHR 10 1 Q8WUA4;H0Y4Q6 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 RPGFS(0.346)PT(0.588)S(0.066)HR;RPGFS(0.3)PT(0.54)S(0.16)HR;RPGFS(0.026)PT(0.729)S(0.245)HR 94.74700000000001 0.0052564 6660570000.0 1808950.0 1606520.0 1596590.0 1381000.0 1449420.0 1650950.0 1565510.0 1329400.0 1709730.0 1601380.0 True False 1708603.9374475756 1529340.3677643188 1699508.7460343225 1512249.824787209 1563481.1079283045 1640645.808661193 1723767.0287052416 1324788.6216842935 1399286.1307859058 1587193.0190547886 1.0764941106312893 0.9635503366030916 1.070763748095629 0.9527825580330425 0.9850604741566938 1.033677560929695 1.0860475115570922 0.8346739216842302 0.8816105627904123 1.0 20.59804615477527 -7.263498713380745 24.999877309594105 0.8936066816528521 1.0196524452937765 0.458826384916331 0.058481198880573515 151.62721975818312 1840691.619184796 0.029030209881993504 0.015063724125208535 5.451315106660482e-08 7.263498713380745 0.12604576364092446 RPGGS(ph)SPLNAVPCEGPPGSEPPR ddPTM_KYSE-520_SHP099_60min_R1 6 RPGGSSPLNAVPCEGPPGSEPPR 23 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 RPGGS(0.5)S(0.5)PLNAVPCEGPPGSEPPR;RPGGS(0.615)S(0.385)PLNAVPCEGPPGSEPPR;RPGGS(0.5)S(0.5)PLNAVPCEGPPGSEPPR;RPGGS(0.5)S(0.5)PLNAVPCEGPPGSEPPR;RPGGS(0.5)S(0.5)PLNAVPCEGPPGSEPPR;RPGGS(0.5)S(0.5)PLNAVPCEGPPGSEPPR 152.38 2.152e-07 3178600000.0 1524670.0 1588565.0 1268709.0 1084852.0 1219320.0 1463818.0 1178718.0 1477666.0 1661716.0 1589428.0 True False 1440093.5157457092 1512247.9529153237 1350492.012146174 1187956.0079073517 1315273.5470182132 1454681.768886284 1297874.3186190983 1472540.321535837 1359990.2628514653 1575346.9044762712 0.9141437429773428 0.9599459957793074 0.8572664270382714 0.7540916889682093 0.8349104208609086 0.9234040862700633 0.8238657243882296 0.9347403529671373 0.8632957344106998 1.0 20.587238126355075 -9.54897327363918 5.417005778669041 1.0000000015383497 0.8730946240549965 0.2962333381842368 0.058265938060260404 7663480.714418208 3002001.2011778313 0.16247960487031538 0.015054859110711284 2.8250538225876456e-10 9.54897327363918 -0.12690537748335318 RPGGSS(ph)PLNAVPCEGPPGSEPPR ddPTM_KYSE-520_SHP099_60min_R1 1 RPGGSSPLNAVPCEGPPGSEPPR 23 1 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 RPGGS(0.326)S(0.674)PLNAVPCEGPPGSEPPR 78.025 0.0069205 735130000.0 205810.0 222290.0 170780.0 126840.0 156070.0 199760.0 150350.0 197190.0 242530.0 236920.0 True False 194393.3090279366 211610.8547359073 181788.75205766142 138894.83546416348 168351.82108317144 198513.22374279055 165548.84527459595 196505.99391449205 198492.66568376645 234821.07312097063 0.8278358770969111 0.9011578557384996 0.7741585950593581 0.59149220986913 0.7169365970678584 0.8453807876115288 0.7049999519817869 0.8368328757839372 0.8452932398512241 1.0 17.841202357854623 -8.121942085367719 1.2366200608952531 0.9987291631538904 0.7660220616402058 0.41996909998772547 0.08214978109402069 0.6596013154485608 2.1427446841322806 0.08562858619991462 0.026386967328967253 7.551929284721128e-09 8.121942085367719 -0.23270710151368457 RPGHDDGQRPSGGAAAAPR ddPTM_KYSE-520_SHP099_60min_R1 2 RPGHDDGQRPSGGAAAAPR 19 2 Q8N726-2;Q8N726 Q8N726-2 CDKN2A Tumor suppressor ARF 0 ; 62.765 0.028255000000000002 91038000.0 101804.0 115044.0 87051.0 109302.0 105217.0 104856.0 83321.0 95011.0 85600.0 66988.0 False True 96156.72917875726 109517.1135554356 92662.44674652466 119690.02921715527 113496.97929716189 104201.5548096416 91743.89981459662 94681.42901673418 70057.19780039745 66394.53843587544 1.4482626349097445 1.6494897944235039 1.39563357061393 1.8027089582489257 1.709432461930261 1.569429613706564 1.3817988945461812 1.4260424313089928 1.0551650700615902 1.0 16.018776951008025 -7.5783411704430845 1.1690629020622854 0.9832331943084971 1.5999053250415949 0.7481593668357992 0.12414385460269127 0.23045130791984744 0.584725544119996 0.11635273598345758 0.03974334508649518 2.6403337649038724e-08 7.5783411704430845 0.6166721307330978 RPGHGS(ph)LTNISR ddPTM_KYSE-520_SHP099_60min_R1 4 RPGHGSLTNISR 12 1 G5EA48;Q7Z6B7-2;Q7Z6B7 G5EA48 SRGAP1 SLIT-ROBO Rho GTPase-activating protein 1 1 RPGHGS(0.898)LT(0.101)NIS(0.001)R;RPGHGS(0.999)LT(0.001)NISR;RPGHGS(0.994)LT(0.005)NIS(0.001)R;RPGHGS(0.992)LT(0.008)NISR 139.71 4.9788999999999994e-05 4338800000.0 2987730.0 2718360.0 1991120.0 2214610.0 2711670.0 2803570.0 2086850.0 2350810.0 2483140.0 2556970.0 True False 2821994.6610079072 2587765.9052584535 2119470.781104641 2425085.8685532217 2925063.0017082305 2786071.87969851 2297809.1636933223 2342655.5887931804 2032264.3708654123 2534317.235092556 1.1135127922944679 1.0210899683061758 0.8363083957116504 0.9568990949409121 1.1541818684752794 1.0993382521808717 0.9066777954534188 0.9243734589950118 0.8018981770414356 1.0 21.273165695558546 -6.832420846227147 10.166780411265144 0.9015190631166653 1.023239945416138 0.28006411505724893 0.09518467822081673 0.6129129246981126 83.49764327329387 0.04328691553418638 0.02918595116672998 1.470886472240164e-07 6.832420846227147 0.12172088229947275 RPGNSTVT(ph)SSPPVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 RPGNSTVTSSPPVTPK 16 1 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 2 RPGNS(0.149)T(0.202)VT(0.494)S(0.046)S(0.11)PPVT(1)PK 141.6 2.0019e-05 622970000.0 684710.0 673690.0 644250.0 653470.0 650720.0 638220.0 611860.0 645780.0 729540.0 633170.0 True False 646727.7713644543 641324.9211706942 685779.385836446 715575.5923270797 701927.9619096649 634236.6322443117 673712.7799781457 643539.9399061855 597073.9262067999 627560.6063988064 1.0305423329160774 1.0219330446040469 1.0927699712888643 1.140249379949673 1.1185022685499781 1.0106380575476446 1.073542177614014 1.025462614039901 0.9514203411094407 1.0 19.25939526788874 -7.495316623289347 3.1199019852263645 0.9761150512058249 1.0710941834789607 0.4587073461924527 0.04072140812503124 0.2505409789082698 4.823932730615999 0.03290851764983896 0.012072263206362394 3.196563798529166e-08 7.495316623289347 0.09497913227313581 RPGNSTVTSS(ph)PPVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 RPGNSTVTSSPPVTPK 16 1 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 2 RPGNS(0.011)T(0.012)VT(0.063)S(0.393)S(0.524)PPVT(0.997)PK;RPGNS(0.012)T(0.016)VT(0.352)S(0.254)S(0.397)PPVT(0.968)PK;RPGNS(0.009)T(0.01)VT(0.045)S(0.23)S(0.706)PPVT(1)PK;RPGNSTVT(0.009)S(0.028)S(0.963)PPVT(1)PK 219.23 1.6249e-14 2210970000.0 2348700.0 2223180.0 2079810.0 2100260.0 1992460.0 2086930.0 2135250.0 2162280.0 2629740.0 2219450.0 True False 2218412.928982628 2116375.095738785 2213877.880413656 2299868.078933807 2149255.266453359 2073904.6957626238 2351101.908031798 2154779.555359946 2152245.506350668 2199787.3997059716 1.008466967889327 0.9620816520822258 1.0064053829518107 1.0454956143676486 0.9770286286486745 0.942775059098814 1.0687859692014108 0.9795399117423614 0.9783879599630138 1.0 21.068932669341887 RPGS(ph)VSSTDQER ddPTM_KYSE-520_SHP099_60min_R1 6 RPGSVSSTDQER 12 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 RPGS(0.998)VS(0.002)STDQER;RPGS(0.848)VS(0.082)S(0.026)T(0.044)DQER;RPGS(0.971)VS(0.026)S(0.001)T(0.001)DQER;RPGS(0.848)VS(0.073)S(0.073)T(0.006)DQER;RPGS(0.813)VS(0.062)S(0.062)T(0.062)DQER;RPGS(0.961)VS(0.01)S(0.01)T(0.02)DQER 123.1 0.00011609 1321910000.0 1553620.0 1450160.0 1451920.0 1263040.0 1442580.0 1517460.0 1586590.0 1737810.0 2048740.0 1712570.0 True False 1467437.601535314 1380492.1368654622 1545513.0863541393 1383078.941853177 1556102.8388425813 1507988.9692667953 1746978.0008262119 1731781.9427179045 1676740.4605325526 1697397.9621592965 0.8645218353323313 0.8132990422053461 0.9105189948431768 0.8148230248219059 0.9167578102091211 0.8884121478197429 1.0292094368982532 1.020256876304286 0.9878299007732606 1.0 20.6948934198405 -6.680477101665288 4.195520448734344 1.0112973592809011 0.8645473229537324 0.8101881497117308 0.03357635024041623 0.09022484417425167 2.992733738582983 0.013440608443348377 0.010021619327643899 2.0870021589623275e-07 6.680477101665288 -0.14675003632716876 RPGSVS(ph)S(ph)TDQER ddPTM_KYSE-520_SHP099_60min_R1 1 RPGSVSSTDQER 12 1 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 2 RPGS(0.454)VS(0.611)S(0.677)T(0.259)DQER 71.87899999999999 0.022369999999999998 101260000.0 121090.0 122150.0 120220.0 134370.0 112200.0 129050.0 119690.0 112620.0 171390.0 117780.0 True False 114372.89631306956 116281.73064911208 127969.57355880109 147140.4844001863 121029.50166932677 128244.55108133295 131789.43326183184 112229.34750570552 140269.89639030522 116736.56083145352 0.979752148756578 0.9961037897715855 1.0962253183350674 1.2604490260136287 1.0367746043510009 1.098580857341642 1.1289473693859453 0.9613898739722545 1.2015935315486086 1.0 16.832896945246954 -4.751309489007683 5.563467160089086 1.1016627058132666 0.9856415785509858 0.2162717127753424 0.08380548533091987 0.2293302117827359 22.463513593337325 0.02117190938164915 0.05288570739826526 1.772925599899527e-05 4.751309489007683 -0.11602112726228087 RPGTQGHLGPEKEEEES(ph)DGEPEDSSTS ddPTM_KYSE-520_SHP099_60min_R1 11 RPGTQGHLGPEKEEEESDGEPEDSSTS 27 2 Q8IYB7;H7C1Q8 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 RPGTQGHLGPEKEEEES(0.931)DGEPEDS(0.014)S(0.018)T(0.018)S(0.018);RPGTQGHLGPEKEEEES(0.998)DGEPEDS(0.001)S(0.001)T(0.001)S;RPGTQGHLGPEKEEEES(0.99)DGEPEDS(0.003)S(0.003)T(0.003)S(0.003);RPGT(0.003)QGHLGPEKEEEES(0.996)DGEPEDSSTS;RPGTQGHLGPEKEEEES(1)DGEPEDSSTS;RPGTQGHLGPEKEEEES(1)DGEPEDSSTS;RPGTQGHLGPEKEEEES(1)DGEPEDSSTS;RPGTQGHLGPEKEEEES(0.994)DGEPEDS(0.001)S(0.001)T(0.002)S(0.002);RPGTQGHLGPEKEEEES(0.907)DGEPEDS(0.023)S(0.023)T(0.023)S(0.023);RPGTQGHLGPEKEEEES(0.921)DGEPEDS(0.037)S(0.014)T(0.014)S(0.014);RPGTQGHLGPEKEEEES(0.995)DGEPEDS(0.003)S(0.001)T(0.001)S(0.001) 114.76 0.00025218 16116890000.0 6932730.0 6227720.0 5713710.0 5966120.0 6133310.0 5715490.0 5585680.0 6079300.0 7312140.0 5621500.0 True False 6548157.646845381 5928530.9832017 6082024.8888592385 6533138.251020612 6615966.60323974 5679817.506856632 6150335.045383475 6058212.327219283 5984439.700049045 5571697.883460823 1.1752535373971202 1.0640438708638724 1.0915927274006159 1.1725578787058346 1.187423787438072 1.0194051482433666 1.1038529320910047 1.0873188844647594 1.0740782837155287 1.0 22.409685601518618 -8.197141432032 0.4087376620249628 0.9922646110533346 1.129557131251655 0.3838024034197298 0.04788870503026024 1.8942813816332371 0.752473930227042 0.08633407027525704 0.038530389791114845 6.3512406411850785e-09 8.197141432032 0.1372925201983204 RPGTQGHLGPEKEEEESDGEPEDS(ph)STS ddPTM_KYSE-520_SHP099_60min_R1 1 RPGTQGHLGPEKEEEESDGEPEDSSTS 27 2 Q8IYB7;H7C1Q8 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 RPGTQGHLGPEKEEEES(0.088)DGEPEDS(0.228)S(0.228)T(0.228)S(0.228) 61.526 0.029866000000000004 669430000.0 364580.0 335610.0 309300.0 299690.0 310800.0 299860.0 287010.0 309420.0 395450.0 287100.0 True False 344356.0206277884 319486.79183911986 329237.97289749753 328172.4474949156 335258.1917899003 297988.4625125809 316023.7717476674 308346.6942391709 323646.2484832615 284556.51736041973 1.2101498283085412 1.1227533806033245 1.1570213747045694 1.1532768623227556 1.1781778709544077 1.0472030838610111 1.1105834956062215 1.0836043999253002 1.13737071104694 1.0 18.11835569715417 -6.252906861533298 24.995824105522612 1.0831545599975556 1.1609549781640796 0.5439438699941077 0.040186666610863966 544.7724491827547 1595900.0044191899 0.012652725894565729 0.012469199821424054 5.585899766768687e-07 6.252906861533298 0.07780041816652394 RPGYGAYDAFK ddPTM_KYSE-520_SHP099_60min_R1 2 RPGYGAYDAFK 11 1 H0YJS4;G3V4T5;P05198 H0YJS4 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 0 ; 124.12 0.00048337 3083800000.0 4375400.0 3931800.0 2447400.0 2586600.0 3762700.0 4210100.0 3319700.0 3373100.0 2947800.0 3670900.0 False True 4132687.839856342 3742910.426247879 2605163.3199784523 2832429.6863103528 4058803.083165564 4183823.204242705 3655287.673149828 3361399.503387455 2412553.8279907918 3638378.6819169815 1.1358597334565845 1.0287303091485305 0.7160231377031511 0.7784867749989146 1.115552678267967 1.1499141705718054 1.0046473972917898 0.9238729107813505 0.6630848624914629 1.0 21.794864275615424 -7.533144750051328 24.79237371712754 0.8188545149728903 0.9823167957783843 0.1393986748060818 0.1554367540838085 407.11746893837096 983161.761263703 0.11202846735335739 0.042445800923888596 2.9299165433289106e-08 7.533144750051328 0.16346228080549396 RPHPQHSQQPPPPQQER ddPTM_KYSE-520_SHP099_60min_R1 1 RPHPQHSQQPPPPQQER 17 1 O95819-3;E7EX83;G5E948;C9J840;H7C360;E7ENQ1;H7C0P6;G3XAA2;A0A0D9SG62;A0A0D9SEY1;O95819-4;O95819-2;O95819;O95819-5;O95819-6;E7EN19;H7C3Z6 O95819-3 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 0 74.786 0.013769 90005000.0 8946.8 8447.8 7631.4 8100.2 6994.1 7555.2 6223.7 7806.1 9771.1 6728.0 False True 8450.50316899637 8041.95500759368 8123.3322546717245 8870.040572586071 7544.495879014603 7508.045194340853 6852.85233345862 7779.022461057434 7996.91454938627 6668.3951543047915 1.2672469122561125 1.2059805727622763 1.2181839958041023 1.3301612108064718 1.1313810451296131 1.1259148596636515 1.0276614050135813 1.1665509138335444 1.1992262552443147 1.0 12.703123882427407 -5.889354214083738 7.2309917227995 1.1116776727030597 1.2488049314684109 0.563666894295721 0.06339590222397425 0.18435298954602378 11.078337575102752 0.019814709652243533 0.022526283548417663 1.2901665741086597e-06 5.889354214083738 0.13712725876535115 RPHS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 5 RPHSPEK 7 1 Q53F19;Q53F19-2 Q53F19 C17orf85 Uncharacterized protein C17orf85 1 RPHS(1)PEK;RPHS(1)PEK;RPHS(1)PEK;RPHS(1)PEK;RPHS(1)PEK 79.16 0.010603 5000470000.0 1292210.0 2118610.0 1036018.0 759781.0 1443250.0 1662230.0 1923380.0 1035735.0 1134706.0 8756180.0 True False 1220528.5353432277 2016828.7955015579 1102801.3779674084 831990.3578035135 1556825.5640308007 1651855.405997087 2117814.0207798653 1032142.2770273675 928671.9940104892 8678607.057404967 0.14063645551296383 0.23239084131372342 0.12707124204067402 0.09586680815253906 0.17938657133951572 0.19033646702412363 0.24402695118830778 0.11892948605694718 0.10700703325634563 1.0 23.049032073671555 -10.187680210472957 4.651832828184295 1.0001392183052762 0.16161658631330109 0.9640569441105793 0.048684740086267185 92787176.79211503 36.035443948306714 138673.86190288942 0.01234353563109795 6.491122266002026e-11 10.187680210472957 -0.8385226319919751 RPHT(ph)PTPGIYMGR ddPTM_KYSE-520_SHP099_60min_R1 19 RPHTPTPGIYMGR 13 1 P62995;P62995-3;H7C2L4;H7BXF3 P62995 TRA2B Transformer-2 protein homolog beta 1 RPHT(0.99)PT(0.01)PGIYMGR;RPHT(0.836)PT(0.164)PGIYMGR;RPHT(1)PTPGIYMGR;RPHT(0.845)PT(0.155)PGIYMGR;RPHT(0.999)PT(0.001)PGIYMGR;RPHT(0.973)PT(0.027)PGIYMGR;RPHT(0.994)PT(0.006)PGIYMGR;RPHT(0.948)PT(0.052)PGIYMGR;RPHT(0.996)PT(0.004)PGIYMGR;RPHT(0.992)PT(0.008)PGIYMGR;RPHT(0.889)PT(0.111)PGIYMGR;RPHT(0.992)PT(0.008)PGIYMGR;RPHT(0.997)PT(0.003)PGIYMGR;RPHT(0.989)PT(0.011)PGIYMGR;RPHT(0.793)PT(0.207)PGIYMGR;RPHT(0.996)PT(0.004)PGIYMGR;RPHT(0.987)PT(0.013)PGIYMGR;RPHT(0.993)PT(0.007)PGIYMGR;RPHT(0.989)PT(0.011)PGIYMGR 186.94 5.1715e-08 246068670000.0 14053737.0 11712441.0 12685267.0 11753838.0 11272635.0 12022297.0 13464765.0 12922973.0 13439302.0 12788262.0 True False 13274148.193179859 11149757.753627643 13502979.607964838 12870919.229599733 12159727.2419805 11947261.384978345 14825914.849642808 12878146.222907582 10999063.534033628 12674967.947797298 1.047272722728004 0.8796675304859677 1.0653265289172928 1.0154597062974418 0.9593497428996388 0.9425871082423197 1.169700381942134 1.0160298847261064 0.8677784101178011 1.0 23.595478763186712 RPHT(ph)PTPGIYMGRPT(ph)YGSSR ddPTM_KYSE-520_SHP099_60min_R1 2 RPHTPTPGIYMGRPTYGSSR 20 2 P62995;P62995-3;H7C2L4;H7BXF3 P62995 TRA2B Transformer-2 protein homolog beta 2 RPHT(0.999)PT(0.002)PGIY(0.004)MGRPT(0.572)Y(0.003)GS(0.384)S(0.036)R;RPHT(1)PTPGIYMGRPT(0.675)Y(0.001)GS(0.314)S(0.009)R 102.95 0.0011482999999999999 2760300000.0 171552.0 148655.0 192142.0 185983.0 123021.0 116272.0 118392.0 114859.0 199632.0 130356.0 True False 162035.66857956647 141513.390664296 204527.78075806977 203658.7684021722 132702.05280625893 115546.30331909144 130360.21875457255 114460.58093729216 163383.8611131889 129201.1472554334 1.254134905313329 1.0952951554255244 1.5830183021031077 1.576292260002417 1.027096551580182 0.8943132918986699 1.0089710619739902 0.8859099425100396 1.2645697393861028 1.0 16.979259355090754 -5.843193862431148 8.397227535454135 0.9997615786359136 1.3711484194520545 0.5383256373181462 0.16476232337744676 0.21675481297679655 19.776351233306197 0.054040079338003186 0.061406852726305215 1.4348487957664177e-06 5.843193862431148 0.3713868408161408 RPHT(ph)PTPGIYMGRPTYGSSR ddPTM_KYSE-520_SHP099_60min_R1 5 RPHTPTPGIYMGRPTYGSSR 20 2 P62995;P62995-3;H7C2L4;H7BXF3 P62995 TRA2B Transformer-2 protein homolog beta 1 RPHT(0.997)PT(0.003)PGIYMGRPTYGSSR;RPHT(0.993)PT(0.007)PGIYMGRPTYGSSR;RPHT(0.996)PT(0.004)PGIYMGRPTYGSSR;RPHT(0.998)PT(0.002)PGIYMGRPTYGSSR;RPHT(0.997)PT(0.003)PGIYMGRPTYGSSR 203.47 1.1246e-13 56017100000.0 439801.0 472275.0 440873.0 573321.0 365846.0 307165.0 455593.0 301002.0 661656.0 123336.0 True False 415404.3618084422 449586.20010077226 469292.37900174095 627809.2554647566 394635.99882100313 305247.86929792876 501648.78659919556 299957.89431639476 541515.9493904191 122243.33899395606 3.39817584522115 3.6777971200786705 3.8390016410214685 5.1357338619145265 3.228282228453484 2.497051142500458 4.103690153816872 2.4537770056430253 4.429819684630773 1.0 16.899396329698575 -10.077505870931022 0.4170687776445841 9.131711132754621e-17 3.7506071689441227 0.49382340986307627 0.7901034259848964 15.205878966148914 1.7436297065674042 20.23155299604106 0.4893129297609603 8.365542868722859e-11 10.077505870931022 3.7506071689441227 RPHTPT(ph)PGIYMGR ddPTM_KYSE-520_SHP099_60min_R1 1 RPHTPTPGIYMGR 13 1 P62995;P62995-3;H7C2L4;H7BXF3 P62995 TRA2B Transformer-2 protein homolog beta 1 RPHT(0.037)PT(0.962)PGIYMGR 86.189 0.010536 525200000.0 921960.0 721680.0 671990.0 785560.0 725460.0 744450.0 795810.0 787840.0 839480.0 699120.0 True False 870817.0409183046 687009.4095362363 715307.5506220161 860219.3862127743 782549.5746972361 739803.611410293 876258.2411571424 785107.1669232391 687051.5935686644 692926.3407071297 1.2567238243961658 0.9914609521628877 1.0322995513376594 1.2414297677512482 1.1293402036046805 1.0676511599419432 1.2645763188377612 1.133031205195691 0.9915218302533136 1.0 19.40234247392113 -7.759485551190973 22.456420764009142 0.9957607464392071 1.1358766064239114 0.29546942107215113 0.08867620673580837 17.705741673238183 203590.07047918782 0.06813637351994871 0.022707583195289146 1.7398605815623674e-08 7.759485551190973 0.14011585998470433 RPIIAGMEFS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RPIIAGMEFSR 11 1 P21453 P21453 S1PR1 Sphingosine 1-phosphate receptor 1 1 RPIIAGMEFS(1)R 106.11 0.00082453 337470000.0 221380.0 322300.0 233910.0 335400.0 307980.0 279060.0 319690.0 357400.0 383710.0 287760.0 True False 209099.6100899109 306816.2242178368 248988.21286923246 367276.3151583132 332216.27383350534 277318.28302794864 352007.38507373165 356160.26281778724 314037.9365419458 285210.6702738921 0.7331409091010143 1.0757529650738402 0.8729975376802184 1.2877369377716907 1.164810115675101 0.9723278682443252 1.2342013176985758 1.2487620553458296 1.101073589709566 1.0 18.121668431195005 -3.6421477397202495 0.8340079063017539 1.1456659814623509 4.5279654919033566e-18 0.4647905608077283 0.12307741993955479 5.249078897412841 1.3617520786495514 0.04307598769663954 7.052644261256812 0.00022795664696915148 3.6421477397202495 -1.1456659814623509 RPILQLS(ph)PPGPR ddPTM_KYSE-520_SHP099_60min_R1 3 RPILQLSPPGPR 12 1 Q8N3X1-2;Q8N3X1;F5GXL1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 RPILQLS(1)PPGPR;RPILQLS(1)PPGPR;RPILQLS(1)PPGPR 120.66 8.0788e-05 3635450000.0 453320.0 417273.0 437400.0 380639.0 412641.0 400948.0 402047.0 391657.0 506910.0 449406.0 True False 428173.43592898455 397226.57874045806 465595.5038647444 416814.8161167113 445113.4990938742 398445.5348078908 442689.83436059486 390298.4332804308 414867.9221612093 445424.6124725777 0.9612702664816143 0.891793061311611 1.0452846358897792 0.9357696104913202 0.9993015352766959 0.8945296771907073 0.9938602896306022 0.8762390365315955 0.9313987385166111 1.0 18.76482175261435 -6.254176528597268 24.9450503328353 0.9348864093947633 0.9651724766545068 0.06271773643745715 0.051618881007754476 1566.1006834967823 5378952.969424435 0.016522254464151433 0.016170513417170598 5.569593144840082e-07 6.254176528597268 0.030286067259743477 RPIS(ph)DDDCPSASK ddPTM_KYSE-520_SHP099_60min_R1 4 RPISDDDCPSASK 13 1 Q96PU4 Q96PU4 UHRF2 E3 ubiquitin-protein ligase UHRF2 1 RPIS(0.814)DDDCPS(0.136)AS(0.05)K;RPIS(0.998)DDDCPS(0.002)ASK;RPIS(0.959)DDDCPS(0.041)ASK;RPIS(0.98)DDDCPS(0.019)AS(0.001)K 188.59 2.8226e-08 2768280000.0 4361630.0 5111230.0 4419640.0 3980300.0 4862950.0 4109570.0 4269160.0 4632590.0 5930450.0 4467340.0 True False 4119681.689206152 4865678.838687363 4704537.066074027 4358586.51527917 5245636.4985994045 4083920.649262414 4700728.355786464 4616520.626544635 4853629.774478598 4427762.843137924 0.9304205837471105 1.0989023150208044 1.0625088182771676 0.9843766863065031 1.1847148739524314 0.9223440355645084 1.061648629865436 1.0426305089260246 1.0961810617297798 1.0 22.078146520849344 -4.245876894821114 23.796968800362226 1.0505670087798946 0.9304204094312442 0.21920598232213317 0.06791193235026272 2263.6322157674795 3461263.3819538024 0.015843820127006306 0.3579047039893857 5.6770550449056074e-05 4.245876894821114 -0.12014659934865046 RPKS(ph)ESQGNATK ddPTM_KYSE-520_SHP099_60min_R1 2 RPKSESQGNATK 12 2 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 RPKS(0.992)ES(0.008)QGNATK;RPKS(0.999)ES(0.001)QGNATK 145.33 2.0402e-05 195878000.0 42315.0 112185.0 47400.0 43369.0 95399.0 117947.0 87137.0 71844.0 104783.0 484340.0 True False 39967.70259713878 106795.46420688192 50455.47984268149 47490.776720634705 102906.35855394049 117210.84902278191 95945.65833516781 71594.78993251563 85757.04856447483 480049.1244108184 0.08325752629211142 0.22246778251695773 0.10510482631253065 0.09892899352523941 0.21436630819864774 0.2441642804090915 0.19986633337353835 0.14914054893941636 0.1786422351456792 1.0 18.87282252176547 -13.281105983134813 0.4512195719681012 9.999999999999995 0.1578975961064638 0.958023081060013 0.052393847153298284 122.944672837739 1.4057208843829008 1083.8860915815262 0.02958090829886994 5.234726752454115e-14 13.281105983134813 -9.84210240389353 RPLAPS(ph)GRSPVEGLGR ddPTM_KYSE-520_SHP099_60min_R1 1 RPLAPSGRSPVEGLGR 16 2 A6NCC9;E9PME3;C9JHT9;C9JJV1;Q9Y5U2-2;Q9Y5U2 A6NCC9 TSSC4 Protein TSSC4 1 RPLAPS(0.873)GRS(0.127)PVEGLGR 122.94 9.065e-05 4209200000.0 800670.0 891160.0 811540.0 605760.0 669840.0 581590.0 615680.0 537200.0 889790.0 621520.0 True False 756255.2390039259 848347.3359415692 863853.1669099107 663331.2482716148 722552.5971317453 577960.0810801439 677918.9428577542 535336.5785834223 728226.5657805568 616013.8163352429 1.227659540987246 1.3771563452724367 1.402327584223842 1.0768122900519832 1.172948687141982 0.9382258412944594 1.1004930812928742 0.869033395660212 1.1821594686185515 1.0 19.232603183368035 -5.3374095267761295 4.912571762732383 1.042668300666692 1.3394682919554315 0.6310014156202768 0.1006636043207925 0.1310618005295033 5.798218161410521 0.027825299371268084 0.04231200232879866 4.598227698892816e-06 5.3374095267761295 0.2967999912887396 RPLAPSGRS(ph)PVEGLGR ddPTM_KYSE-520_SHP099_60min_R1 3 RPLAPSGRSPVEGLGR 16 2 A6NCC9;E9PME3;C9JHT9;C9JJV1;Q9Y5U2-2;Q9Y5U2 A6NCC9 TSSC4 Protein TSSC4 1 RPLAPS(0.443)GRS(0.557)PVEGLGR;RPLAPS(0.217)GRS(0.783)PVEGLGR;RPLAPS(0.132)GRS(0.868)PVEGLGR 123.34 8.798200000000001e-05 7703800000.0 1644870.0 1400290.0 1633690.0 1276920.0 1395530.0 1159150.0 1114890.0 1128410.0 1756540.0 1169320.0 True False 1553625.7821329497 1333017.96652186 1739000.2713964193 1398278.0928800034 1505350.2715204617 1151915.3148851402 1227593.9614778468 1124495.8090828743 1437596.6147699791 1158960.734517193 1.3405335796645161 1.1501838904638793 1.5004824750347239 1.2064930685184143 1.2988794414571516 0.9939209160222432 1.0592196309301587 0.9702622147516704 1.2404187406477254 1.0 20.144400258121596 -6.253175854796916 24.180339811301735 1.0513091462512578 1.2970487324920554 0.5559135942925795 0.11016753030155182 296.66393340082533 868084.5597716017 0.035039638046363585 0.03443460079490794 5.58244104408967e-07 6.253175854796916 0.24573958624079761 RPLDS(ph)PEAEELPAMK ddPTM_KYSE-520_SHP099_60min_R1 5 RPLDSPEAEELPAMK 15 1 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK;RPLDS(1)PEAEELPAMK 185.61 3.836e-11 6661830000.0 5061050.0 4552770.0 4080360.0 3714310.0 4149140.0 4257230.0 4196700.0 4441310.0 5132020.0 4424490.0 True False 4780303.467546953 4334048.095352903 4343386.5344068315 4067316.905651978 4475653.712622737 4230659.048430709 4620943.391845007 4425904.132219549 4200174.535696219 4385292.460801132 1.0900763199437007 0.9883144930682987 0.9904439836638296 0.9274904563398118 1.020605524632466 0.9647381756741092 1.0537366511242503 1.0092608809518255 0.9577866409687315 1.0 22.06424163039271 -4.260571978276935 24.364957469506926 0.9907314381017206 1.0900763648538574 0.4477211533480313 0.03325315019441652 48.99986012162651 1376061.062360428 0.008282803023724696 0.048450832017579236 5.4881758917809006e-05 4.260571978276935 0.0993449267521368 RPLEEDFRRS(ph)PTEDFR ddPTM_KYSE-520_SHP099_60min_R1 4 RPLEEDFRRSPTEDFR 16 3 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RPLEEDFRRS(0.807)PT(0.193)EDFR;RPLEEDFRRS(0.783)PT(0.217)EDFR;RPLEEDFRRS(0.997)PT(0.003)EDFR;RPLEEDFRRS(0.995)PT(0.005)EDFR 175.59 2.8695e-08 6484800000.0 5468280.0 5877090.0 6713190.0 4193800.0 4792510.0 4397220.0 3695510.0 3798900.0 7129620.0 4069890.0 True False 5164943.607654074 5594745.774708058 7145932.968883779 4592377.491088056 5169653.271348174 4369775.3189140605 4069088.2155019795 3785722.5025699283 5835060.731094271 4033833.940926509 1.2804056099710854 1.386954906086945 1.7714990437217824 1.1384646860384289 1.2815731502722159 1.0832809141147717 1.0087396444900192 0.9384924015241953 1.446529732394995 1.0 21.943720263703174 -5.392581447218356 10.427230134802022 1.1239217343773584 1.4701750919274639 0.4419235281242293 0.18092541706157356 0.3876912980974054 30.633978281636185 0.051126048321872584 0.07584676176765844 4.049659910364486e-06 5.392581447218356 0.34625335755010545 RPLFLAPDFDRWLDES(ph)DAEMELR ddPTM_KYSE-520_SHP099_60min_R1 4 RPLFLAPDFDRWLDESDAEMELR 23 2 H3BPZ1;H3BS72;Q9P035 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 RPLFLAPDFDRWLDES(1)DAEMELR;RPLFLAPDFDRWLDES(1)DAEMELR;RPLFLAPDFDRWLDES(1)DAEMELR;RPLFLAPDFDRWLDES(1)DAEMELR 247.68 9.268399999999999e-29 402012000.0 222059.0 346485.0 261137.0 231929.0 238877.0 240137.0 167255.0 213160.0 463727.0 212166.0 True False 209740.94460635824 329839.34051541187 277970.3088539728 253971.4624280033 257675.26087579154 238638.21590870278 184162.76765149675 212420.59771191803 379525.86640636605 210286.37430265016 0.9974062527916958 1.5685245494826863 1.3218655263603052 1.207740935522909 1.2253540522075763 1.1348249105538708 0.8757712821965555 1.0101491283795507 1.8048048413262459 1.0 17.68199584679442 -5.549797412599336 2.160550783181373 1.155678197715675 1.3195985908250127 0.03406579164933332 0.2676209285295096 0.9958493515363162 9.363338256147363 0.086220231529458 0.12957088708434486 2.8196979423638407e-06 5.549797412599336 0.16392039310933781 RPLLAFACDDKDGK ddPTM_KYSE-520_SHP099_60min_R1 2 RPLLAFACDDKDGK 14 2 D6REC9;Q96J01 D6REC9 THOC3 THO complex subunit 3 0 ; 154.6 8.844799999999999e-07 1230160000.0 1998910.0 1707270.0 1085870.0 1082780.0 1877020.0 1994810.0 1329710.0 1666560.0 1394560.0 1600180.0 False True 1888026.4775717058 1625250.186535486 1155866.9176534305 1185687.0856503225 2024730.7952171094 1982359.6508528003 1464130.0635190094 1660779.0923380286 1141343.0579967566 1586003.6501212022 1.190430096064043 1.0247455523896711 0.7287920917238111 0.7475941720308855 1.2766242972154445 1.2499086308542282 0.9231568057281083 1.0471470807845316 0.7196345720323755 1.0 20.596964660672306 -7.731273784053892 24.996290613580772 0.859816846463715 1.0172006291783713 0.10669360066466782 0.18879344211491253 454.1446956458798 376321.9374044374 0.13743197564985044 0.051929885178190215 1.8566336436615478e-08 7.731273784053892 0.15738378271465625 RPLLPFETEVGPCGVGEASLDKADSEGSNS(ph)GGTWPK ddPTM_KYSE-520_SHP099_60min_R1 1 RPLLPFETEVGPCGVGEASLDKADSEGSNSGGTWPK 36 2 Q8TDM6-4;Q8TDM6;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 RPLLPFETEVGPCGVGEAS(0.07)LDKADS(0.221)EGS(0.221)NS(0.255)GGT(0.234)WPK 49.942 0.036966000000000006 70012000.0 127270.0 100920.0 105730.0 101830.0 116970.0 115100.0 87071.0 100290.0 138550.0 109940.0 True False 120210.07939354495 96071.65171599161 112545.5249739814 111507.89258369405 126174.87353173943 114381.61820582286 95872.98641106978 99942.11739786189 113392.81256127426 108966.01713202582 1.1031887055933736 0.8816661767089174 1.0328497630377602 1.023327230989717 1.1579286538376725 1.0496999084332446 0.879842990818943 0.917186110205071 1.0406254678822007 1.0 16.73351875109739 -6.730316410865628 24.989637792554056 0.9525124244239915 1.0382615427176902 0.20949674140917207 0.07745244237117549 318.68821396975125 255884.70535685663 0.03074807815786148 0.023814986468778304 1.8607309830610875e-07 6.730316410865628 0.08574911829369869 RPLLPFETEVGPCGVGEASLDKADSEGSNSGGT(ph)WPK ddPTM_KYSE-520_SHP099_60min_R1 1 RPLLPFETEVGPCGVGEASLDKADSEGSNSGGTWPK 36 2 Q8TDM6-4;Q8TDM6;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 RPLLPFETEVGPCGVGEASLDKADSEGSNSGGT(1)WPK 200.78 6.2352e-16 680020000.0 159470.0 150120.0 138840.0 145050.0 142420.0 134830.0 134840.0 131270.0 158950.0 120750.0 True False 150623.88120443633 142908.00986528595 147789.8485518543 158835.50838912738 153627.64374104756 133988.47595735092 148470.94311158324 130814.6550086482 130088.68680342517 119680.2489420785 1.2585525392526011 1.1940818232626584 1.2348725028419683 1.3271655915923004 1.2836507702737028 1.1195537872100947 1.2405634549059013 1.093034616530238 1.0869687183420218 1.0 16.868825555670124 -7.470228079541127 0.812254117715883 1.0031585943495513 1.2529009556802444 0.728864705451846 0.051434806667897966 0.32385076961927994 0.4151777134774616 0.049766846943059856 0.020571121155577438 3.386662512086725e-08 7.470228079541127 0.24974236133069305 RPLPVES(ph)PDTQR ddPTM_KYSE-520_SHP099_60min_R1 1 RPLPVESPDTQR 12 1 P57682 P57682 KLF3 Krueppel-like factor 3 1 RPLPVES(0.998)PDT(0.002)QR 75.589 0.018052000000000002 0.0 181890.0 157180.0 168880.0 108080.0 153390.0 145910.0 162840.0 146300.0 209070.0 139370.0 True False 171800.19911127433 149628.83686801017 179766.27501755403 118351.8907045631 165460.92033028556 144999.32156743368 179301.45636524935 145792.5194466766 171108.15822580727 138135.2902282191 1.2437096908938767 1.0832049986705214 1.3013783423523029 0.8567824377755242 1.1978178788122908 1.0496906426147457 1.2980133901265776 1.0554328239062347 1.2386998133721827 1.0 17.07572241483773 RPLS(ph)ASLGQLNEVGLPSAAILPDEGAVDLPSR ddPTM_KYSE-520_SHP099_60min_R1 2 RPLSASLGQLNEVGLPSAAILPDEGAVDLPSR 32 1 Q5TC82-2;Q5TC82 Q5TC82-2 RC3H1 Roquin-1 1 RPLS(0.895)AS(0.105)LGQLNEVGLPSAAILPDEGAVDLPSR;RPLS(0.554)AS(0.446)LGQLNEVGLPSAAILPDEGAVDLPSR 124.59 8.277600000000001e-05 268619000.0 132526.0 150682.0 104035.0 96277.0 110207.0 144578.0 83962.0 133001.0 158804.0 127827.0 True False 125174.51859596862 143443.01054170702 110741.26256188533 105427.13713326449 118879.66390794553 143675.63507351413 92449.6983501539 132539.65057366664 129969.19672306455 126694.55222790128 0.9880023757517341 1.1321955681541713 0.874080697350595 0.8321363095677513 0.9383170927042062 1.1340316733987652 0.7297053955710197 1.046135356595689 1.0258467663966542 1.0 16.95099496542884 RPLS(ph)GPDVGTPQPAGLASGAK ddPTM_KYSE-520_SHP099_60min_R1 4 RPLSGPDVGTPQPAGLASGAK 21 1 O96013 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 RPLS(1)GPDVGTPQPAGLASGAK;RPLS(1)GPDVGTPQPAGLASGAK;RPLS(0.991)GPDVGT(0.009)PQPAGLASGAK;RPLS(0.754)GPDVGT(0.246)PQPAGLASGAK 196.98 2.2736999999999997e-13 3222190000.0 3518000.0 3351200.0 2900380.0 2682540.0 3071950.0 3556800.0 3012180.0 3672560.0 3834580.0 3761200.0 True False 3322849.5270408704 3190203.3217462464 3087343.135572076 2937487.795064939 3313694.987995445 3534600.6918720314 3316680.550443848 3659820.746541951 3138316.933895427 3727878.6941693253 0.8913513018108797 0.855769080344797 0.8281769308644367 0.7879783748487805 0.8888956052079446 0.948153355258154 0.889696479563935 0.9817435187111045 0.841850604957716 1.0 21.829923484528894 -5.989484937579949 8.84368185598782 0.9274330029771933 0.8405755320105294 0.4442023781199984 0.04808674904346976 0.14949871488944705 92.57460688720755 0.01447246746551466 0.016071270083489433 1.0245073121730344e-06 5.989484937579949 -0.08685747096666396 RPLSAS(ph)LGQLNEVGLPSAAILPDEGAVDLPSR ddPTM_KYSE-520_SHP099_60min_R1 2 RPLSASLGQLNEVGLPSAAILPDEGAVDLPSR 32 1 Q5TC82-2;Q5TC82 Q5TC82-2 RC3H1 Roquin-1 1 RPLS(0.244)AS(0.756)LGQLNEVGLPSAAILPDEGAVDLPSR;RPLS(0.32)AS(0.68)LGQLNEVGLPSAAILPDEGAVDLPSR 166.81 2.8944e-10 307880000.0 94281.0 105269.0 97217.0 61683.0 70688.0 101533.0 67649.0 72970.0 111024.0 93717.0 True False 89051.04498548608 100211.7192280097 103483.76337269983 67545.33377432992 76250.74344029748 100899.29488524608 74487.62111061628 72716.88410132601 90864.84028728187 92886.74029072275 0.9587056743165766 1.078859252831575 1.1140854232671946 0.7271795044472688 0.8209001973978537 1.0862615543342906 0.8019187763235124 0.7828553771370611 0.9782326304366736 1.0 16.50318504416438 -5.2413281064851285 24.78201301813313 0.878499156020341 1.0533810376617971 0.31761292935312024 0.11063435868777514 858.5770074104526 1057975.5208179592 0.03026541787035334 0.05233230692153057 5.736828849835548e-06 5.2413281064851285 0.17488188164145613 RPLT(ph)PFHHR ddPTM_KYSE-520_SHP099_60min_R1 4 RPLTPFHHR 9 1 Q9UHV7;J3QRB7 Q9UHV7 MED13 Mediator of RNA polymerase II transcription subunit 13 1 RPLT(1)PFHHR;RPLT(1)PFHHR;RPLT(1)PFHHR;RPLT(1)PFHHR 107.39 0.0009176 3474370000.0 1173590.0 1057990.0 1191510.0 1443320.0 1120630.0 1058540.0 1139119.0 1025978.0 1198240.0 883562.0 True False 1108488.623206336 1007162.5723246343 1268316.6410834072 1580492.69885002 1208817.205487503 1051933.2592145235 1254272.2652501008 1022419.1217830656 980669.8211722946 875734.328080835 1.2657818560516867 1.1500777576366377 1.4482892818223916 1.804762755290931 1.3803469462440925 1.2012013523779832 1.4322520255644524 1.16749919353246 1.119825716232256 1.0 19.740133739591048 -7.565700401917929 1.117725994166944 1.0030400848607124 1.3983363411047185 0.38339158022276787 0.17097050115830406 0.55846115543416 1.2977785346514807 0.17454865604990577 0.06069596703389559 2.7183138511957186e-08 7.565700401917929 0.3952962562440061 RPLWHES(ph)DFAVDNVGNR ddPTM_KYSE-520_SHP099_60min_R1 1 RPLWHESDFAVDNVGNR 17 1 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 1 RPLWHES(1)DFAVDNVGNR 49.089 0.054986 0.0 78480.0 73692.0 79442.0 73611.0 69987.0 69829.0 66494.0 70839.0 85595.0 85198.0 True False 74126.55795399872 70151.725706053 84562.95843169413 80606.96730804589 75494.57872844185 69393.17130924767 73215.8624389025 70593.27604294683 70053.1056743578 84443.2120030409 0.8778273137138524 0.8307562448421165 1.0014180705093136 0.9545701234711813 0.8940277961681893 0.8217732327229421 0.8670426041617877 0.8359852067257305 0.8295883590007815 1.0 16.365693835694557 -6.00708942694116 23.452759452731048 0.8601109400716587 0.9171554747436073 0.09021841716812384 0.06333405717826808 290.13700513903734 959821.055994518 0.020087397562932225 0.02188498548134866 9.838085058026627e-07 6.00708942694116 0.05704453467194859 RPMEEDGEEKS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 29 RPMEEDGEEKSPSK 14 2 Q12906;Q12906-5;Q12906-2;Q12906-3;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 RPMEEDGEEKS(0.825)PS(0.175)K;RPMEEDGEEKS(0.999)PS(0.001)K;RPMEEDGEEKS(1)PSK;RPMEEDGEEKS(0.992)PS(0.008)K;RPMEEDGEEKS(0.997)PS(0.003)K;RPMEEDGEEKS(0.9)PS(0.1)K;RPMEEDGEEKS(0.818)PS(0.182)K;RPMEEDGEEKS(0.989)PS(0.011)K;RPMEEDGEEKS(0.994)PS(0.006)K;RPMEEDGEEKS(0.906)PS(0.094)K;RPMEEDGEEKS(0.999)PS(0.001)K;RPMEEDGEEKS(0.899)PS(0.101)K;RPMEEDGEEKS(0.997)PS(0.003)K;RPMEEDGEEKS(0.967)PS(0.033)K;RPMEEDGEEKS(0.994)PS(0.006)K;RPMEEDGEEKS(0.988)PS(0.012)K;RPMEEDGEEKS(0.5)PS(0.5)K;RPMEEDGEEKS(1)PSK;RPMEEDGEEKS(0.937)PS(0.063)K;RPMEEDGEEKS(0.961)PS(0.039)K;RPMEEDGEEKS(0.968)PS(0.032)K;RPMEEDGEEKS(1)PSK;RPMEEDGEEKS(0.998)PS(0.002)K;RPMEEDGEEKS(0.98)PS(0.02)K;RPMEEDGEEKS(0.973)PS(0.027)K;RPMEEDGEEKS(0.999)PS(0.001)K;RPMEEDGEEKS(0.999)PS(0.001)K;RPMEEDGEEKS(0.976)PS(0.024)K;RPMEEDGEEKS(0.999)PS(0.001)K 210.67 1.4065e-12 149643100000.0 76197630.0 68154360.0 64654950.0 64512680.0 67530820.0 66342440.0 66149520.0 68057380.0 79234520.0 65663290.0 True False 71970795.56769045 64880122.24382006 68822711.5285776 70643945.71075553 72845111.33619432 65928372.22348143 72836559.03870173 67821304.83349192 64847528.50770503 65081564.335866556 1.1058553417104515 0.99690477489129 1.0574839776961122 1.0854678499456956 1.1192894958741681 1.0130114863749242 1.1191580869632136 1.042097028944885 0.9964039612361846 1.0 25.955745593041172 -7.621060547780443 4.1631022836819165 0.9989983242400067 1.0685953137882938 0.3518870965054016 0.03903698771589677 0.25302003646444793 7.803289083430127 0.029283252338500515 0.009951147539066086 2.392982112156971e-08 7.621060547780443 0.06959698954828708 RPMEEDGEEKS(ph)PSKK ddPTM_KYSE-520_SHP099_60min_R1 10 RPMEEDGEEKSPSKK 15 3 Q12906;Q12906-5;Q12906-2;Q12906-3;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 RPMEEDGEEKS(0.993)PS(0.007)KK;RPMEEDGEEKS(0.988)PS(0.012)KK;RPMEEDGEEKS(0.999)PS(0.001)KK;RPMEEDGEEKS(0.947)PS(0.053)KK;RPMEEDGEEKS(0.833)PS(0.167)KK;RPMEEDGEEKS(0.994)PS(0.006)KK;RPMEEDGEEKS(0.97)PS(0.03)KK;RPMEEDGEEKS(0.999)PS(0.001)KK;RPMEEDGEEKS(0.956)PS(0.044)KK;RPMEEDGEEKS(0.999)PS(0.001)KK 149.36 7.6588e-06 249807820000.0 56745260.0 49383260.0 48225840.0 50094660.0 54132850.0 53840500.0 50012980.0 54661380.0 62331590.0 46616720.0 True False 53597487.30892864 47010814.063815504 51334554.81047225 54855641.42489134 58392797.3212159 53504461.468380556 55068780.098047696 54471772.43084195 51013744.507514976 46203732.12805935 1.160025063784384 1.0174678948773928 1.1110477973552482 1.1872556371171954 1.2638112687384873 1.1580116800973206 1.191868655662226 1.1789474555836033 1.104104412304272 1.0 25.46150605492596 -3.9003326689445967 20.775596718383348 1.1442935349575887 3.011331746554129 0.0 0.07707692041475878 9125.472523072442 2191279.9407692887 0.019202685906213532 122817.17631813393 0.00012579614459960745 3.9003326689445967 1.8670382115965403 RPMEEDGEEKSPS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 RPMEEDGEEKSPSK 14 2 Q12906;Q12906-5;Q12906-2;Q12906-3;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 RPMEEDGEEKS(0.255)PS(0.745)K;RPMEEDGEEKS(0.225)PS(0.775)K 270.79 8.5508e-24 7937400000.0 9024500.0 7750000.0 7025700.0 7117500.0 7686600.0 6911800.0 7579300.0 7476900.0 8326000.0 6853500.0 True False 8523892.995105263 7377678.367012845 7478587.863517448 7793945.060045595 8291491.689228596 6868660.89239797 8345489.610839677 7450964.37902158 6814208.281379785 6792783.321942324 1.25484541330371 1.0861053587829264 1.100960756301443 1.147386084709824 1.2206324412623444 1.0111703210391745 1.2285817484979593 1.0968941633914884 1.0031540766754996 1.0 22.695571404763957 -7.65994022069477 3.7702879441836656 0.9998190150713894 1.144011667849406 0.4130656251447815 0.06960265815440157 0.22240646882204212 5.720730505425949 0.053477252907621745 0.017233678284097557 2.188062783362538e-08 7.65994022069477 0.14419265277801674 RPMEFEAALLSPGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 RPMEFEAALLSPGSPK 16 1 Q9H9L7-2;Q9H9L7;B4DQP0 Q9H9L7-2 AKIRIN1 Akirin-1 1 RPMEFEAALLSPGS(1)PK;RPMEFEAALLSPGS(1)PK;RPMEFEAALLS(0.008)PGS(0.992)PK;RPMEFEAALLSPGS(1)PK;RPMEFEAALLSPGS(1)PK;RPMEFEAALLSPGS(1)PK;RPMEFEAALLS(0.002)PGS(0.998)PK;RPMEFEAALLSPGS(1)PK 161.02 4.2354e-08 2630251000.0 2595198.0 2496378.0 2276482.0 2444584.0 2633886.0 2497497.0 2348525.0 2393480.0 2730738.0 2334728.0 True False 2451237.193541046 2376448.253740228 2423227.6722199856 2676916.5283690197 2841157.8434386523 2481909.194823527 2585936.826395215 2385177.5765224304 2234904.8155030585 2314044.126310896 1.0592871439529836 1.02696756156021 1.0471830008199337 1.1568130866357433 1.227788965272712 1.072541861498659 1.1174967655080013 1.03073988494979 0.9658004314144158 1.0 21.141984944661075 -7.457112494001999 3.4279825598914937 0.9844543701046446 1.1020009328616984 0.42816233255886105 0.05581562589349645 0.26509864241861364 6.007245298817691 0.04263972160656713 0.01690172972894616 3.490498904176525e-08 7.457112494001999 0.11754656275705377 RPMEFEAALLSPGS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 1 RPMEFEAALLSPGSPKR 17 2 Q9H9L7-2;Q9H9L7;B4DQP0 Q9H9L7-2 AKIRIN1 Akirin-1 1 RPMEFEAALLS(0.005)PGS(0.995)PKR 62.19 0.031581 0.0 79884.0 114650.0 100160.0 66270.0 101950.0 90470.0 95317.0 72290.0 126030.0 87316.0 True False 75452.67527519412 109142.04190684142 106616.47386166616 72568.28087519805 109972.88498384912 89905.34317185749 104952.57256427455 72039.2428626129 103146.1289577583 86542.44817081997 0.8718574164468222 1.261138830870762 1.2319558334104843 0.8385281721168864 1.27073924193572 1.038858329896096 1.2127294152473724 0.8324151255857677 1.191855917389412 1.0 16.40112031281149 -7.229255568109181 24.987835987241734 1.009101330210766 1.1084092929061637 0.06491441927515507 0.16557591441929348 1775.5014421058513 1378519.7199103427 0.0738903380543954 0.042656605425005135 5.8985386829629245e-08 7.229255568109181 0.09930796269539766 RPMS(ph)DPSWNR ddPTM_KYSE-520_SHP099_60min_R1 2 RPMSDPSWNR 10 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 RPMS(1)DPSWNR;RPMS(0.994)DPS(0.006)WNR 95.428 0.0018541 2249670000.0 1312110.0 1225670.0 1199710.0 989290.0 1246770.0 1302030.0 1207860.0 967660.0 1127740.0 1192630.0 True False 1239324.6426735627 1166786.9734318221 1277045.226203871 1083311.8241591146 1344883.7058490785 1293903.5478064956 1329962.2763776095 964303.413313542 922970.844011919 1182064.226052099 1.048441036755426 0.98707578464556 1.0803518100441911 0.9164576681059022 1.1377416524487591 1.0946135745330199 1.1251184555508171 0.8157792039220725 0.7808127711423013 1.0 20.17287699408629 -7.268127095046255 24.988786744803594 0.8487219760847482 1.0532938637116978 0.5303978916678573 0.08151326203029659 394.7152485876517 1474851.2076992092 0.042899957822465126 0.021340174502062485 5.393527593644799e-08 7.268127095046255 0.20457188762694956 RPMS(ph)SPEMK ddPTM_KYSE-520_SHP099_60min_R1 7 RPMSSPEMK 9 1 P51610-2;P51610;A6NEM2;P51610-4;H7C1C4 P51610-2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 RPMS(0.975)S(0.025)PEMK;RPMS(0.554)S(0.446)PEMK;RPMS(0.5)S(0.5)PEMK;RPMS(0.98)S(0.02)PEMK;RPMS(0.8)S(0.2)PEMK;RPMS(0.5)S(0.5)PEMK;RPMS(0.5)S(0.5)PEMK 123.95 0.00045131 17831850000.0 16016010.0 13473800.0 12800210.0 10776430.0 11969950.0 13596240.0 12792730.0 10949800.0 13148690.0 14011310.0 True False 15127569.998175604 12826498.423413878 13625332.017660145 11800618.667148184 12911916.965300882 13511380.822890848 14085943.993413238 10911817.699502522 10761219.347501261 13887180.694034245 1.089319015246501 0.9236214827192375 0.9811445762719436 0.8497490546960031 0.9297723742334307 0.972939081054455 1.0143127178768818 0.7857475134740703 0.7749030983750462 1.0 23.72725040452587 -7.263008965108847 24.981056804662114 0.8352439786327942 0.959223133820566 0.2701673356085291 0.08245201779483616 168.479298462479 2681403.950876848 0.041353326160495536 0.021536121132998198 5.4574659516841794e-08 7.263008965108847 0.1239791551877718 RPMSDPS(ph)WNR ddPTM_KYSE-520_SHP099_60min_R1 1 RPMSDPSWNR 10 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 RPMS(0.052)DPS(0.948)WNR 64.22399999999999 0.033181 1117800000.0 1457900.0 1491200.0 1357300.0 1098300.0 1304700.0 1468300.0 1294700.0 1198400.0 1306500.0 1359700.0 True False 1377027.3807484028 1419560.5136631653 1444793.7297567832 1202682.1017840647 1407372.4672724674 1459135.7950617697 1425580.9110543365 1194243.0301086626 1069272.5341848056 1347654.1158305926 1.021795848484243 1.0533567159317099 1.0720805233220552 0.8924263931348749 1.0443128179110477 1.0827227683436178 1.057824032374743 0.8861643474242803 0.7934324702639196 1.0 20.36201883631358 -7.269705347213217 22.99348865599946 0.8798487399406365 1.0314790980119943 0.4596255254015974 0.06854574066332407 176.8987364423768 492071.77389787714 0.036509590708811775 0.018064554762629064 5.3739627626448025e-08 7.269705347213217 0.15163035807135783 RPMSS(ph)PEMK ddPTM_KYSE-520_SHP099_60min_R1 3 RPMSSPEMK 9 1 P51610-2;P51610;A6NEM2;P51610-4;H7C1C4 P51610-2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 RPMS(0.49)S(0.51)PEMK;RPMS(0.115)S(0.885)PEMK;RPMS(0.123)S(0.877)PEMK 124.12 0.00044927 2598210000.0 4734680.0 3737830.0 3942510.0 2868030.0 3341760.0 3713630.0 3497500.0 3045600.0 3653620.0 3928530.0 True False 4472037.862049423 3558259.036202783 4196650.502839038 3140606.7088953345 3604737.499986538 3690451.8576688957 3851061.4323106054 3035035.5244483845 2990214.7082650526 3893726.280550087 1.1485239433465353 0.913844163616989 1.077798026995918 0.8065812752640755 0.9257809204496209 0.9477943727332386 0.9890426688561544 0.7794681253299627 0.7679570911806902 1.0 21.892720039008296 -1.0000000027216491 0.5455061745846763 0.8826096090224816 11.322102643069849 0.36601458669732734 0.09501749634532981 148.44668880320228 1.3817385225037289 0.04771098161918755 1812.2140009884 0.09999999937331713 1.0000000027216491 10.439493034047368 RPNEDS(ph)DEDEEK ddPTM_KYSE-520_SHP099_60min_R1 12 RPNEDSDEDEEK 12 1 H0YE74;E9PLP8;Q12996 H0YE74 CSTF3 Cleavage stimulation factor subunit 3 1 RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK;RPNEDS(1)DEDEEK 222.45 5.939e-10 14940510000.0 11408270.0 9428790.0 8749070.0 9901270.0 10170150.0 9918030.0 10609910.0 10778900.0 10904960.0 10132710.0 True False 10775430.521277575 8975816.775497666 9313049.051206946 10842283.723874627 10970482.944762077 9856127.895863574 11682463.245542992 10741510.511714166 8924894.155670833 10042942.072529085 1.0729356441029465 0.8937437566278137 0.9273227888749206 1.0795923789635327 1.092357485041175 0.981398461196295 1.1632510833153726 1.069558146819935 0.8886732683725719 1.0 23.259678631874063 -5.260580488980139 24.992220432296396 1.0471274024234778 0.9575750312371958 0.1420740188823144 0.08187446798335549 128.1927992689371 3730142.247794823 0.022515588546292844 0.036278389945558126 5.488068343146423e-06 5.260580488980139 -0.08955237118628201 RPNEDS(ph)DEDEEKGAVVPPVHDIYR ddPTM_KYSE-520_SHP099_60min_R1 16 RPNEDSDEDEEKGAVVPPVHDIYR 24 2 H0YE74;E9PLP8;Q12996 H0YE74 CSTF3 Cleavage stimulation factor subunit 3 1 RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR;RPNEDS(1)DEDEEKGAVVPPVHDIYR 211.37 4.0678e-21 149479590000.0 48936480.0 46742700.0 44074740.0 41060310.0 43816550.0 42589660.0 39917240.0 41126160.0 53800170.0 37627010.0 True False 46221875.901945695 44497110.529776864 46915868.26247741 44962669.5171676 47264663.20293355 42323842.134107746 43952464.173920274 40983502.94987788 44031415.319918334 37293663.964770846 1.239402916956854 1.1931547024130076 1.2580117712970251 1.2056382971552813 1.2673644307939742 1.1348802352616416 1.1785504426553424 1.098940103836207 1.1806674549733769 1.0 25.152427207746587 -8.39512875457704 0.29347527198791795 0.9603436158192707 1.2510955203315919 0.7441514237828442 0.03881884811436305 1.5008764774836412 0.3003164450071031 0.1395303036057384 0.055500387797034034 4.025976591591776e-09 8.39512875457704 0.29075190451232114 RPNKQEES(ph)ES(ph)PVERPLK ddPTM_KYSE-520_SHP099_60min_R1 1 RPNKQEESESPVERPLK 17 3 D6RBF8;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3 D6RBF8 SRPK1 SRSF protein kinase 1 2 RPNKQEES(1)ES(1)PVERPLK 74.36399999999999 0.021066 1323100000.0 1235100.0 1037100.0 1056900.0 1249900.0 1154600.0 1182100.0 1028300.0 1283700.0 1385000.0 1131900.0 True False 1166586.5408891926 987276.1592811628 1125029.4650997908 1368690.1202038624 1245460.4512246412 1174722.075422268 1132250.5992408842 1279247.1443178328 1133518.9130087697 1121872.2466048747 1.0398568503852705 0.8800254772938358 1.002814240662848 1.2200053297921696 1.1101624583314025 1.0471085981290051 1.0092509219899302 1.1402788046403878 1.0103814551426344 1.0 20.097476967478254 -5.008959464103357 24.98525419681418 1.0823531968656834 0.9553108191953955 0.2972640164118132 0.07378404964931758 460.3010920219264 1283654.1967200958 0.019306417038916418 0.03718771124511186 9.795814126763263e-06 5.008959464103357 -0.12704237767028792 RPNKQEESES(ph)PVERPLK ddPTM_KYSE-520_SHP099_60min_R1 5 RPNKQEESESPVERPLK 17 3 D6RBF8;H3BLV9;Q96SB4-4;Q96SB4;Q96SB4-3 D6RBF8 SRPK1 SRSF protein kinase 1 1 RPNKQEES(0.007)ES(0.993)PVERPLK;RPNKQEES(0.053)ES(0.947)PVERPLK;RPNKQEES(0.007)ES(0.993)PVERPLK;RPNKQEESES(1)PVERPLK;RPNKQEES(0.005)ES(0.995)PVERPLK 242.16 3.1995e-23 11772280000.0 5516450.0 4495840.0 4367600.0 4804430.0 4589310.0 4433160.0 4570010.0 4562050.0 5480980.0 4101490.0 True False 5210441.521729554 4279853.098006585 4649142.48440708 5261041.582695447 4950462.587398022 4405491.004042791 5031991.209799507 4546225.313340475 4485772.196261948 4065153.9895109297 1.2817328778131751 1.052814508146464 1.1436571643787616 1.294180145763283 1.2177798430690205 1.0837205713264522 1.2378353250044767 1.1183402461679985 1.103469193992728 1.0 21.954878572472193 -8.002003558236439 1.1660147230976121 1.000876824131807 1.1831275819939127 0.373805658843095 0.07502317343126282 0.5747405718375357 1.758618913922119 0.07177938356788036 0.02276966853121135 9.953972618868245e-09 8.002003558236439 0.18225075786210576 RPNT(ph)SPDR ddPTM_KYSE-520_SHP099_60min_R1 8 RPNTSPDR 8 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RPNT(0.5)S(0.5)PDR;RPNT(0.5)S(0.5)PDR;RPNT(0.5)S(0.5)PDR;RPNT(0.894)S(0.106)PDR;RPNT(0.5)S(0.5)PDR;RPNT(0.5)S(0.5)PDR;RPNT(0.864)S(0.136)PDR;RPNT(0.966)S(0.034)PDR 90.82700000000001 0.011725 21817010000.0 4523510.0 3725570.0 3904600.0 2980750.0 3429140.0 3827040.0 3777770.0 3259450.0 3703880.0 3965060.0 True False 4272581.882906381 3546588.0250054174 4156296.76358089 3264039.5838048323 3698993.8088623444 3803154.023791592 4159663.8590822085 3248143.728711347 3031348.7592165465 3929932.6531699984 1.0871895933025701 0.9024551660305516 1.057599997350667 0.8305586563097875 0.9412359282744013 0.967740253951644 1.05845677933613 0.8265138401522732 0.7713487804355559 1.0 21.90607315871132 -7.282565040779309 24.6640503837424 0.8491984631465009 0.9705884321634644 0.23147756637500605 0.09128205130981014 945.1362002521604 1103432.288836232 0.047865909752421776 0.023032376010521303 5.2171696504899884e-08 7.282565040779309 0.12138996901696342 RPNT(ph)SPDRGSR ddPTM_KYSE-520_SHP099_60min_R1 1 RPNTSPDRGSR 11 2 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RPNT(0.866)S(0.117)PDRGS(0.018)R 71.87899999999999 0.050259 515900000.0 84154.0 100510.0 99690.0 42532.0 51858.0 59727.0 43973.0 37171.0 105190.0 49810.0 True False 79485.80986316002 95681.34873141433 106116.17690963975 46574.228492287926 55938.92956834178 59354.22163839424 48418.219975123444 37042.06247677664 86090.1476241101 49368.722151593596 1.6100438982213814 1.9380965226851792 2.149461689200606 0.9433954630074324 1.1330844131750755 1.2022636813677041 0.9807468750446589 0.7503143865671423 1.743819646774697 1.0 15.591309682732213 -5.265456715813891 24.99987246061974 1.0969700993891138 1.9030902991700525 0.6382439330943956 0.2729967733233594 202.17125076563428 1258112.285102358 0.07419310727218668 0.1147668893560721 5.426793350528704e-06 5.265456715813891 0.8061201997809386 RPNTS(ph)PDRGSR ddPTM_KYSE-520_SHP099_60min_R1 1 RPNTSPDRGSR 11 2 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RPNT(0.22)S(0.599)PDRGS(0.181)R 105.78 0.00062408 2583200000.0 127330.0 156680.0 175630.0 74536.0 82473.0 97314.0 58464.0 64031.0 146050.0 79362.0 True False 120266.75107393794 149152.85761852533 186951.39081793555 81619.8790299344 88963.15589281991 96706.62722920459 64374.111673654676 63808.89140594778 119531.00162088849 78658.91442270162 1.5289653049067244 1.8961977636380725 2.3767349472087274 1.0376430901565838 1.1309990297443566 1.2294426885872995 0.8183956280875874 0.8112099165651847 1.5196116358604466 1.0 16.263322655230322 -5.279876002565876 24.80528106170116 1.0679979878111334 1.930189167089902 0.6782199771952653 0.2700581939751223 403.0257334036634 542244.0475437288 0.07672884408010944 0.11405091867289982 5.249573218574542e-06 5.279876002565876 0.8621911792787686 RPNTSPDRGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RPNTSPDRGSR 11 2 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RPNT(0.091)S(0.06)PDRGS(0.849)R 77.74600000000001 0.010343000000000001 460570000.0 104640.0 125510.0 121530.0 66267.0 73809.0 73185.0 51822.0 49207.0 125750.0 82863.0 True False 98835.41060533152 119480.31120564931 129364.01825487503 72564.99575609996 79617.3483842365 72728.22526840268 57060.67349398149 49036.312402000134 102916.96989953266 82128.89828643839 1.20341819587822 1.454790137193142 1.575133977856323 0.8835500934520916 0.9694194132077306 0.8855375730811671 0.6947697422528764 0.5970652647863085 1.2531151890116967 1.0 16.325602324802215 -5.27290405287065 24.399148992554313 0.8748817869171345 1.4154816999912196 0.6114731575300444 0.18694075362889956 323.5844247877408 688652.6855854633 0.052971725960121674 0.07938555668607204 5.334527362785395e-06 5.27290405287065 0.5405999130740852 RPPDEQR ddPTM_KYSE-520_SHP099_60min_R1 2 RPPDEQR 7 1 B8ZZU8;Q15370;Q15370-2;A0A0B4J296;I3L0M9 B8ZZU8 TCEB2 Transcription elongation factor B polypeptide 2 0 ; 113.5 0.0069539 305571000.0 114797.0 106416.0 74593.0 56063.0 127508.0 130081.0 82138.0 84640.0 90641.0 146130.0 False True 108428.98156785408 101303.6156263276 79401.38413301992 61391.210664044454 137542.15417872122 129269.11622790294 90441.31062962938 84346.4035951246 74182.87927366632 144835.40188741966 0.7486359008561716 0.6994396004443082 0.5482180675325394 0.4238688184244053 0.9496445785101113 0.8925243037498776 0.6244420179807232 0.5823604070273298 0.5121874783854886 1.0 17.14405475562123 -5.754295307352831 24.99977198644913 0.7391401560808121 0.6077247014607142 0.15928566721359905 0.17051142787935925 406.4717712533106 1422387.9513774076 0.05448779925455802 0.06885835881555732 1.7607783622567944e-06 5.754295307352831 -0.13141545462009785 RPPEEDFRHS(ph)PEEDFR ddPTM_KYSE-520_SHP099_60min_R1 8 RPPEEDFRHSPEEDFR 16 2 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR;RPPEEDFRHS(1)PEEDFR 191.8 2.113e-12 15998600000.0 7868160.0 6989700.0 7367540.0 7259070.0 7053230.0 7078100.0 6724330.0 7036000.0 8585650.0 6093440.0 True False 7431697.480011894 6653904.320246399 7842463.416880802 7948969.830281029 7608279.073610928 7033922.9524121145 7404090.899536579 7011593.758214752 7026712.386623641 6039456.862224588 1.2305241430724425 1.1017388603046474 1.2985378645443442 1.3161729625059506 1.2597621354328998 1.1646615106082938 1.2259531061224167 1.1609642916850116 1.1634676009649325 1.0 22.525987380893 -8.32600445627466 0.6738889263275227 0.9975964710452425 1.2342926569458306 0.5810193086621932 0.05844731994946363 0.947985687690947 0.8504504018970268 0.06762921197577484 0.0247678231560269 4.720581974724218e-09 8.32600445627466 0.23669618590058805 RPPEEDFRHS(ph)PEEDFRQS(ph)PQEHFR ddPTM_KYSE-520_SHP099_60min_R1 6 RPPEEDFRHSPEEDFRQSPQEHFR 24 3 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 2 RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR;RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR;RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR;RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR;RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR;RPPEEDFRHS(1)PEEDFRQS(1)PQEHFR 181.13 3.474600000000001e-11 15660970000.0 2590264.0 2041471.0 2407891.0 2616491.0 2125157.0 2203872.0 2194036.0 2488381.0 2773599.0 1736817.0 True False 2446576.892356732 1943395.6688495546 2563107.5066218185 2865161.517963296 2292394.7654107106 2190116.817363193 2415830.5706078704 2479749.38710349 2269983.338340942 1721430.1526031792 1.421246681811035 1.1289425051087405 1.4889407524004612 1.6644076517601045 1.331680383281371 1.2722658622258107 1.403385764420709 1.4405169930093105 1.3186613089751158 1.0 20.715176213759545 -8.124622814169774 5.147025429317504 1.0000084354181245 1.3910805159285602 0.44335217134049676 0.13197819620313 1.2085416642490356 49.003363335380044 0.13417410243611833 0.03493517611005988 7.50545777208674e-09 8.124622814169774 0.39107208051043574 RPPES(ph)PPIVEEWNSR ddPTM_KYSE-520_SHP099_60min_R1 9 RPPESPPIVEEWNSR 15 1 A0A3B3IU46;Q9BTL3 A0A3B3IU46 FAM103A1 RNMT-activating mini protein 1 RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR;RPPES(0.998)PPIVEEWNS(0.002)R;RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR;RPPES(1)PPIVEEWNSR 144.5 5.8795e-06 7485580000.0 2146587.0 1871900.0 1878000.0 1821852.0 1905426.0 1965598.0 1816555.0 1949384.0 2380960.0 1912215.0 True False 2027511.5399949045 1781971.114220818 1999058.8849062412 1995000.2663202223 2055372.1858090775 1953329.973780444 2000190.1072683297 1942622.0418936475 1948637.6831172265 1895274.2627807583 1.069772106238665 0.9402180725054002 1.054759685267508 1.052618243964937 1.0844721664680987 1.0306318257677947 1.0553565499980135 1.024982019775555 1.0281560412571493 1.0 20.853975203432054 RPPGGT(ph)SPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLR ddPTM_KYSE-520_SHP099_60min_R1 1 RPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLGPVAAAGSGLR 45 1 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 RPPGGT(0.485)S(0.485)PPNGGLPGPLAT(0.024)S(0.005)AAPPGPPAAASPCLGPVAAAGSGLR 146.37 7.0508000000000005e-09 701070000.0 495550.0 527630.0 437880.0 396790.0 472590.0 437200.0 376400.0 523230.0 540080.0 455910.0 True False 468060.85364556586 502281.8628112235 466106.4454327711 434500.8023007369 509780.14433072315 434471.2726288943 414450.1853099958 521415.0372527995 442015.08630886284 451870.99209261243 1.0358285037903812 1.1115603161096015 1.0315033573503676 0.9615594050163869 1.1281541706625904 0.9614940552321358 0.9171869683218189 1.1539024331659993 0.9781886734129426 1.0 18.78555142045353 -4.9609438703658 12.19578888259927 1.0175117547487504 1.073208168211673 0.09457796021570042 0.07204095202290628 2.223446706748728 686.8485506327986 0.018556596103331748 0.03862246515539408 1.0940977618950755e-05 4.9609438703658 0.055696413462922534 RPPGPT(ph)TSPASTSLSSPGQR ddPTM_KYSE-520_SHP099_60min_R1 1 RPPGPTTSPASTSLSSPGQR 20 1 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 RPPGPT(0.456)T(0.085)S(0.456)PAS(0.003)TSLSSPGQR 88.264 0.002136 1017400000.0 643850.0 642020.0 535430.0 504230.0 448630.0 601520.0 513200.0 625990.0 757110.0 687200.0 True False 608134.357016846 611176.3955083336 569944.6745182902 552151.8675977222 483934.6286444749 597765.6905574852 565079.2643493359 623818.586797165 619637.909189941 681111.9426335106 0.8928552253327144 0.8973215080405549 0.836785613117583 0.8106624374590088 0.7105067439771323 0.8776320794585276 0.8296422790128509 0.915882614515873 0.909744596158627 1.0 19.377532403085453 -7.796130550725157 1.115761985686031 0.9942936646381013 0.8329819588423502 0.49368246362489265 0.05207866926736161 0.4190856309180812 1.1056771161771284 0.0530014755810281 0.01754265570293906 1.599077267090378e-08 7.796130550725157 -0.16131170579575116 RPPGPTTS(ph)PASTSLSSPGQR ddPTM_KYSE-520_SHP099_60min_R1 3 RPPGPTTSPASTSLSSPGQR 20 1 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 RPPGPT(0.011)T(0.057)S(0.932)PASTSLSSPGQR;RPPGPTT(0.003)S(0.261)PAS(0.109)T(0.261)S(0.261)LS(0.099)S(0.006)PGQR;RPPGPT(0.136)T(0.267)S(0.596)PASTSLSSPGQR 176.91 2.7590999999999997e-09 6740070000.0 1169020.0 1099790.0 1027800.0 886950.0 743905.0 1071780.0 863750.0 1119780.0 1338910.0 1057167.0 True False 1104172.1302164064 1046954.4375815552 1094053.6325381454 971245.4613287578 802446.0912595425 1065090.6234633948 951066.279387645 1115895.7445386178 1095797.695174418 1047801.3228434793 1.0537991374356641 0.9991917501500897 1.0441422516714796 0.9269366626614218 0.7658380207823158 1.0165005523881154 0.9076780670658834 1.06498791346278 1.0458067491274854 1.0 19.998933757839588 -9.446978368052514 11.381961083614598 0.9999998621390163 0.9764680298684324 0.002482862048893253 0.08767720036839778 0.0 0.0 0.08953517076684962 0.021715468604672685 3.572906341407668e-10 9.446978368052514 -0.023531832270583863 RPPGPTTSPAST(ph)SLSSPGQR ddPTM_KYSE-520_SHP099_60min_R1 1 RPPGPTTSPASTSLSSPGQR 20 1 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 RPPGPTTSPAS(0.046)T(0.393)S(0.393)LS(0.133)S(0.034)PGQR 67.13600000000001 0.030820999999999998 1304400000.0 122300.0 66164.0 96030.0 78766.0 61896.0 72560.0 96339.0 119000.0 103970.0 79124.0 True False 115515.77520099428 62985.38212581122 102220.24745343266 86251.89695813859 66766.86305993459 72107.1261252346 106077.88629803334 118587.21677480874 85091.66887041282 78423.02291754057 1.4729829443383688 0.8031491235939533 1.30344691712425 1.0998287715691584 0.8513681387943681 0.9194637421851624 1.3526370490662036 1.512147993829562 1.0850342884625108 1.0 16.258989633034794 -6.773484653828461 24.998548600995633 1.2801338510619735 1.0640232557427918 0.09356866841516653 0.23144219756928766 416.6996691767091 864802.9691704959 0.09386869137774322 0.06382897103217253 1.6846719550644562e-07 6.773484653828461 -0.21611059531918175 RPPGPTTSPASTS(ph)LSSPGQR ddPTM_KYSE-520_SHP099_60min_R1 1 RPPGPTTSPASTSLSSPGQR 20 1 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 RPPGPTTSPAST(0.002)S(0.421)LS(0.421)S(0.155)PGQR 189.62 3.9616999999999997e-13 1771100000.0 223370.0 178420.0 152500.0 159150.0 129190.0 148830.0 161200.0 220230.0 202100.0 210440.0 True False 210979.22082294425 169848.4353861199 162330.39400862716 174275.56814980786 139356.51800945034 147901.09676431475 177495.66916039147 219466.07353206814 165403.73452640572 208575.66531984255 1.0115236621655548 0.814325271961444 0.7782806002785604 0.8355508198071101 0.6681341171596055 0.7091004434170892 0.8509893466632786 1.0522132253325218 0.7930154952293482 1.0 17.670211321794415 -10.146156744187614 6.473870701746425 1.0000005019605742 0.8308233167914857 0.16039474676420218 0.11306710925821727 8.680381003990259e-07 1.1441500244362473e-07 0.11600448086592968 0.02813513563560759 7.142384988564825e-11 10.146156744187614 -0.16917718516908853 RPPGPTTSPASTSLS(ph)SPGQR ddPTM_KYSE-520_SHP099_60min_R1 3 RPPGPTTSPASTSLSSPGQR 20 1 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 RPPGPTTSPAST(0.002)S(0.036)LS(0.83)S(0.132)PGQR;RPPGPTTSPASTS(0.001)LS(0.499)S(0.499)PGQR;RPPGPTTSPASTS(0.018)LS(0.491)S(0.491)PGQR 195.24 2.731e-13 1387640000.0 403066.0 285079.0 322854.0 294197.0 280667.0 314495.0 271958.0 360613.0 370295.0 395880.0 True False 380707.12548784947 271383.37692769745 343665.68542466476 322157.3944264466 302753.89612321666 312532.12004900334 299450.1686943038 359362.11767070723 303058.76237731543 392372.8111899799 0.9702688734554492 0.6916467430672674 0.8758651864343067 0.8210492298113483 0.771597540627321 0.7965182885663321 0.7631776722401782 0.9158690597874034 0.7723745217162353 1.0 18.581865550345714 -10.926217413127915 0.6260788564293915 1.1656079295887711 0.8157861003270734 0.32526431788103927 0.07748324728426341 165.04745167900782 17.60970632416617 39.91591979301917 0.028124989276625732 1.185175286392512e-11 10.926217413127915 -0.3498218292616977 RPPPAPHDGDRK ddPTM_KYSE-520_SHP099_60min_R1 2 RPPPAPHDGDRK 12 2 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 0 ; 108.17 0.00051781 765410000.0 333740.0 322100.0 283030.0 213440.0 322590.0 347910.0 266030.0 343820.0 366790.0 221869.0 False True 315226.7769058041 306625.83251804323 301274.5666640113 233725.27342692393 347975.99771397613 345738.564639338 292922.9086025991 342627.36866819154 300190.18202345533 219903.41327147002 1.4334783267627489 1.3943659534721031 1.3700313341298112 1.0628542320004413 1.5824038041847077 1.5722291868772629 1.3320525781970776 1.558081175598758 1.365100148094889 1.0 17.74651047186119 -8.039047954085353 23.051600626404333 0.9999999972818037 1.4110502529385827 0.42306493090459996 0.1438415163106086 2761.391349696663 1630160.1346603562 0.14304825529597842 0.03693490071448644 9.14012312155697e-09 8.039047954085353 0.411050255656779 RPPPEHFR ddPTM_KYSE-520_SHP099_60min_R1 1 RPPPEHFR 8 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 0 105.52 0.0043487 147060000.0 59405.0 55121.0 47384.0 50130.0 55240.0 68949.0 48057.0 51123.0 67590.0 49922.0 False True 56109.686229068444 52472.90442169221 50438.44845708057 54894.34012786595 59587.073727394076 68518.66371566705 52915.070551122444 50945.66624519792 55317.359805243774 49479.72991872829 1.1339933811528484 1.0604929434311845 1.019375985679934 1.1094308764019387 1.204272412668124 1.384782492309693 1.0694292518984398 1.0296270074407736 1.1179802294010888 1.0 15.594550005046134 -6.9712157241414765 24.999911406830787 1.054187329597992 1.1493678071378328 0.19983478559684265 0.09626606169815262 406.3584906332746 352932.5979357241 0.045065653961063885 0.03038273674209816 1.068523986734461e-07 6.9712157241414765 0.09518047753984082 RPPPPPVPLLPPGTS(ph)PPVDPFTTLASK ddPTM_KYSE-520_SHP099_60min_R1 2 RPPPPPVPLLPPGTSPPVDPFTTLASK 27 1 A0A0D9SGJ6;J3KQV8;O43426 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 RPPPPPVPLLPPGT(0.179)S(0.821)PPVDPFTTLASK;RPPPPPVPLLPPGT(0.142)S(0.858)PPVDPFTTLASK 115.84 0.00024922 432440000.0 262549.0 386490.0 270850.0 223842.0 296090.0 361380.0 228897.0 288220.0 388540.0 301360.0 True False 247984.88359154406 367922.44026668265 288309.4243753224 245115.8763794486 319390.5984783506 359124.49337289564 252036.14257944256 287220.23209105345 317990.93029633723 298690.1848545323 0.8302411534289864 1.2317861748482555 0.9652457261551279 0.8206358588542996 1.0693039633488453 1.202331082783306 0.8438045686107458 0.9615991641336827 1.0646179433422118 1.0 18.18829030500702 RPPQEHFR ddPTM_KYSE-520_SHP099_60min_R1 1 RPPQEHFR 8 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 0 66.351 0.06686900000000001 106300000.0 78560.0 77197.0 78244.0 57862.0 71150.0 92347.0 77328.0 82910.0 79614.0 70191.0 False True 74202.12019452263 73488.34024494058 83287.7334348264 63361.187083155346 76749.10021187707 91770.62811861969 85145.06888855308 82622.40456133941 65158.10450561734 69569.16234777162 1.0665949925283154 1.0563349875851207 1.1971932767923315 0.9107654159527893 1.1032057541272873 1.3191279731077459 1.223890959947434 1.1876297165734941 0.9365946391577392 1.0 16.08616032949139 -6.003983110371706 24.999988703604238 1.157532461408616 1.0600103458051247 0.06301610395771717 0.12091421490789765 383.580736907587 2407571.807671772 0.03830281631296846 0.042469534794031844 9.908704789045005e-07 6.003983110371706 -0.09752211560349133 RPPS(ph)PDVIVLS(ph)DNEQPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 3 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 3 RPPS(1)PDVIVLS(0.999)DNEQPS(0.551)S(0.451)PR;RPPS(1)PDVIVLS(1)DNEQPS(0.895)S(0.105)PR;RPPS(1)PDVIVLS(1)DNEQPS(0.555)S(0.445)PR 192.07 9.074399999999999e-13 5766200000.0 2826580.0 2568740.0 2503320.0 2814310.0 2259660.0 2518200.0 2239570.0 2555120.0 3034750.0 2501130.0 True False 2669783.972752463 2445333.8746426557 2664688.012653618 3081781.1762468433 2437482.3862933246 2502482.9797211406 2465967.5916968873 2546256.88508949 2483715.8998219226 2478971.934049697 1.0769722464711617 0.9864306412892341 1.0749165716856388 1.243169046779963 0.9832634056132317 1.0094841919541362 0.9947541389338903 1.0271422802798236 1.0019136827275312 1.0 21.241310507212493 RPPS(ph)PDVIVLS(ph)DNEQPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 3 RPPS(1)PDVIVLS(1)DNEQPS(0.29)S(0.71)PR;RPPS(1)PDVIVLS(1)DNEQPS(0.244)S(0.756)PR;RPPS(1)PDVIVLS(1)DNEQPS(0.3)S(0.7)PR;RPPS(1)PDVIVLS(1)DNEQPS(0.31)S(0.69)PR 160.41 1.8284e-09 8398500000.0 2692090.0 2744750.0 2666270.0 3466950.0 2484570.0 2304360.0 2501580.0 2539260.0 3015450.0 2744310.0 True False 2542754.401151632 2612888.0900462563 2838142.030382839 3796447.8856234727 2680091.5237304755 2289977.6344810585 2754464.119468066 2530451.8997277375 2467920.2933085104 2719997.5484408727 0.9348370194705367 0.9606214871568497 1.0434355104509885 1.3957541571313663 0.9853286541624746 0.8419043009041293 1.012671544886851 0.930314036929267 0.9073244550250219 1.0 21.375173920485896 -5.987489767108766 24.999472142996243 0.9359366983329177 1.0868177401826355 0.23176636331269984 0.12491279805192253 355.99892532237465 711396.1548998425 0.04113609710744696 0.04661574001435591 1.0292247776087603e-06 5.987489767108766 0.15088104184971785 RPPS(ph)PDVIVLS(ph)DNEQPSSPR ddPTM_KYSE-520_SHP099_60min_R1 3 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 2 RPPS(1)PDVIVLS(1)DNEQPSSPR;RPPS(1)PDVIVLS(1)DNEQPSSPR;RPPS(1)PDVIVLS(1)DNEQPSSPR 213.71 6.9848e-19 1443850000.0 733950.0 693380.0 732240.0 619730.0 695920.0 709680.0 630680.0 658650.0 813100.0 732900.0 True False 693236.3304069482 660068.9840154016 779441.3620254236 678628.9528713805 750684.9447568435 705250.6238775703 694435.2892436465 656365.2968800651 665461.5365829824 726407.0761875713 0.9543358718988335 0.9086764235277905 1.073009043518951 0.9342267925486816 1.0334218503166168 0.9708752117049338 0.9559864048795843 0.9035777849589393 0.9161000193934624 1.0 19.4704187309354 -6.9086542358687675 3.333410278030685 0.9320258326808738 0.9806687675792132 0.10372331798295076 0.05017183029022471 0.4607704279794855 10.137572478672809 0.02272503126488684 0.0143721024633758 1.2340869621969433e-07 6.9086542358687675 0.048642934898339374 RPPS(ph)PDVIVLSDNEQPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 2 RPPS(1)PDVIVLSDNEQPS(0.694)S(0.306)PR 197.61 2.3249e-13 260160000.0 161230.0 156980.0 157350.0 127760.0 156940.0 148880.0 113110.0 127300.0 161770.0 125660.0 True False 152286.2504959634 149438.4451682161 167493.03276890147 139902.27198755546 169290.28513354878 147950.78469576794 124544.26264722031 126858.42601204335 132396.64588984018 124546.75016200065 1.222723598149943 1.1998582457899405 1.3448205798307837 1.1232912284389722 1.359250923154151 1.1879136509248547 0.9999800274613581 1.0185607079031436 1.0630277041964482 1.0 16.92632785180573 -6.658485967240367 4.438664719418719 1.0221639494130554 1.2476841753676153 0.7303119759016863 0.06599083259843735 0.10862233387182149 3.742695911061165 0.024822219657887803 0.018736066008526245 2.1954018849921775e-07 6.658485967240367 0.2255202259545599 RPPS(ph)PDVIVLSDNEQPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 2 RPPS(1)PDVIVLSDNEQPS(0.11)S(0.89)PR;RPPS(1)PDVIVLSDNEQPS(0.017)S(0.983)PR 247.41 1.1525e-26 1600180000.0 591260.0 519090.0 544430.0 549350.0 556350.0 541580.0 516170.0 521860.0 683680.0 537470.0 True False 558461.6291524116 494152.1372300253 579524.8289187992 601560.0588318998 600131.5798015154 538199.7983310992 568349.5009337428 520049.7894630401 559540.9461702785 532708.433945333 1.048343884883417 0.9276221395074358 1.0878837127220526 1.1292482350554118 1.1265666949494955 1.010308386418995 1.0669053927388492 0.976237199046126 1.0503699782378497 1.0 19.02298659655004 -9.421825029957814 10.84312152959599 0.9999998021701367 1.046918489150508 0.052748178662444634 0.05981752048190281 0.0 0.0 0.061790492756088854 0.014986395781901017 3.785950836740252e-10 9.421825029957814 0.04691868698037116 RPPS(ph)PEPSTK ddPTM_KYSE-520_SHP099_60min_R1 10 RPPSPEPSTK 10 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 RPPS(0.994)PEPS(0.006)TK;RPPS(0.983)PEPS(0.017)TK;RPPS(1)PEPSTK;RPPS(1)PEPSTK;RPPS(0.998)PEPS(0.002)TK;RPPS(0.807)PEPS(0.161)T(0.032)K;RPPS(1)PEPSTK;RPPS(0.834)PEPS(0.161)T(0.005)K;RPPS(0.892)PEPS(0.054)T(0.054)K;RPPS(0.947)PEPS(0.051)T(0.002)K 122.33 0.00048737 396530400000.0 28589570.0 27575460.0 23933540.0 19117710.0 20786740.0 25988590.0 21555180.0 25944020.0 30343040.0 25984730.0 True False 27003649.560205147 26250693.509990703 25476334.28341794 20934651.4104509 22422538.177628 25826385.569832038 23734187.952684194 25854026.249999765 24833508.821791735 25754525.50801403 1.0485011479556254 1.0192652744397206 0.9891983556633756 0.812853314029671 0.8706251711238393 1.0027901916420727 0.9215540758185908 1.0038634274956755 0.964238646682281 1.0 24.618322624830263 -9.811482888250366 19.87847152705292 0.9999999982787399 0.9564358411733496 0.02939843205964565 0.06866737000083938 0.0 0.0 0.07215274452464895 0.01749961099137259 1.543537239437918e-10 9.811482888250366 -0.0435641571053903 RPPS(ph)SSSSSSASSYTGRPIELDK ddPTM_KYSE-520_SHP099_60min_R1 2 RPPSSSSSSSASSYTGRPIELDK 23 2 Q9BZL6-2;Q9BZL6;Q9BZL6-3 Q9BZL6-2 PRKD2 Serine/threonine-protein kinase D2 1 RPPS(0.795)S(0.177)S(0.015)S(0.003)S(0.003)S(0.003)S(0.003)ASSYTGRPIELDK;RPPS(0.711)S(0.144)S(0.144)S(0.001)SSSASSYTGRPIELDK 206.4 2.2669e-16 1665570000.0 394130.0 450460.0 385540.0 457730.0 371670.0 428410.0 471950.0 505710.0 660890.0 518690.0 True False 372266.8232213238 428819.22544575477 410392.5252858101 501232.521578457 400918.31448697567 425736.13427937945 519659.311788132 503955.8100436013 540889.0356811302 514094.8101347139 0.724120951782755 0.8341247898094645 0.7982817900423279 0.9749807072495316 0.7798528726285306 0.8281276641711656 1.0108238821783866 0.9802779567285347 1.0521192297961444 1.0 18.97167492237274 -6.760983758200815 23.674742401630333 1.0091618201230672 0.8275320777955372 0.6872013357919289 0.061946737331301405 3.7858429509823366 196750.4679300182 0.02486463181791016 0.018058188100690584 1.733868839984708e-07 6.760983758200815 -0.18162974232753004 RPPSAFFLFCSEYRPK ddPTM_KYSE-520_SHP099_60min_R1 1 RPPSAFFLFCSEYRPK 16 2 P09429;Q5T7C4 P09429 HMGB1 High mobility group protein B1 0 106.32 0.00036281 104700000.0 226680.0 173830.0 188680.0 171220.0 203440.0 195640.0 175800.0 161110.0 176780.0 128370.0 False True 214105.6085246231 165478.94587585045 200842.61469867392 187492.69732083005 219449.5705847402 194418.93819102668 193571.57964266045 160551.14701335662 144681.20826114804 127232.74167034884 1.68278703825589 1.3006003305705292 1.5785450510768928 1.473619878494881 1.7247885072956985 1.5280574452663496 1.521397535739589 1.2618697428475874 1.1371381796991136 1.0 16.957110451404272 -7.550235707758383 1.6092514257903188 1.021039997511676 1.54569396233654 0.7599547422064021 0.1103829110250074 0.18434737180814229 0.8543173089570043 0.09796829893175063 0.03166691562731422 2.816853705107708e-08 7.550235707758383 0.524653964824864 RPPSPDVIVLSDNEQPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 RPPSPDVIVLSDNEQPSSPR 20 1 Q86YP4-2;Q86YP4;Q86YP4-3;C9JMI3;C9JGN4;C9JHD7;C9JJK9 Q86YP4-2 GATAD2A Transcriptional repressor p66-alpha 1 RPPSPDVIVLSDNEQPS(0.608)S(0.392)PR 133.29 4.1533e-06 519230000.0 421110.0 393160.0 381320.0 247250.0 346970.0 375630.0 300890.0 372960.0 436170.0 446650.0 True False 397750.18883802684 374272.0034548084 405900.49733357155 270748.5656615767 374274.56501075125 373285.55383712635 331306.8976034137 371666.2888095184 356972.5229509279 442693.02848844125 0.8984785466266093 0.8454436355881775 0.9168892917051429 0.611594374065563 0.845449421891051 0.8432153429469985 0.748389688300827 0.8395575825500551 0.8063658110221369 1.0 18.755947128549465 -10.699901211065393 7.33563500430073 1.0011622360978205 0.8151967770922793 0.3110453445255926 0.08153583022152255 0.001546806418900442 6.327944209572823e-05 0.07879299910057293 0.01899798536345735 1.9957162287682746e-11 10.699901211065393 -0.18596545900554118 RPPSPEPS(ph)TK ddPTM_KYSE-520_SHP099_60min_R1 1 RPPSPEPSTK 10 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 RPPS(0.016)PEPS(0.492)T(0.492)K 128.1 0.0004157 2396300000.0 1038100.0 984470.0 803730.0 737840.0 766600.0 930390.0 791850.0 947070.0 1133500.0 943880.0 True False 980514.5235989541 937174.5834804026 855539.7218134685 807964.0917603149 826927.0586426556 924583.0908993519 871897.9257112659 943784.8352178007 927684.9732097035 935517.9575275272 1.0480980249597216 1.0017708114949002 0.9145091389528934 0.863654283981546 0.8839243030974353 0.9883114305394254 0.9319948577102655 1.008836685200701 0.9916271149529555 1.0 19.83540582110144 -7.263658222779595 24.728414752582776 1.0001739280123991 0.9441907118903979 0.17380684344810782 0.052301862959659884 330.46235702745 3682859.034485082 0.02991608431337703 0.015545068784976033 5.4493132936785835e-08 7.263658222779595 -0.05598321612200119 RPPT(ph)PCS(ph)DPER ddPTM_KYSE-520_SHP099_60min_R1 4 RPPTPCSDPER 11 1 Q9BW71;Q9BW71-2;Q9BW71-3 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 RPPT(1)PCS(1)DPER;RPPT(1)PCS(1)DPER;RPPT(1)PCS(1)DPER;RPPT(1)PCS(1)DPER 102.5 0.0034973 4756440000.0 2353980.0 2190580.0 2078520.0 2144670.0 2217930.0 2300580.0 2128110.0 2400000.0 2658460.0 2421720.0 True False 2223400.036857211 2085341.2486723845 2212504.724949585 2348498.7919814535 2392468.472704546 2286221.2268631766 2343240.1271521156 2391674.960164209 2175750.678322951 2400265.44486965 0.9263142297905123 0.8687960963357667 0.9217750185416422 0.9784329466564445 0.9967516208751955 0.9524868308835456 0.9762420786253366 0.9964210272143847 0.9064625260399515 1.0 21.194762531333293 -5.119483040043627 3.880965647258127 0.9724751247868825 0.896994137162833 0.5334123941693171 0.02908881521021458 0.1662620141942279 4.359648460393055 0.007686101621863209 0.014310554782924438 7.594810811485416e-06 5.119483040043627 -0.07548098762404942 RPPTPAPWPSSGLGTPLT(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 2 RPPTPAPWPSSGLGTPLTPPK 21 1 M0R0S1;M0R2P6;Q8TBC3;M0R1G0;M0QZE8;M0R0K4;M0QYB1;M0R0E3;M0R0S2 M0R0S1 SHKBP1 SH3KBP1-binding protein 1 1 RPPTPAPWPSSGLGT(0.001)PLT(0.999)PPK;RPPTPAPWPSSGLGT(0.061)PLT(0.939)PPK 129.22 5.8914e-05 1998850000.0 722370.0 691560.0 612710.0 568140.0 571780.0 772390.0 477080.0 545290.0 754900.0 659150.0 True False 682298.6960911062 658336.4195472767 652206.2669706627 622135.8547824799 616775.833016825 767569.2275064777 525307.9022521074 543398.516261643 617829.1894803743 653310.4438109404 1.044371328446962 1.0076930895318594 0.998309874194209 0.952282120508268 0.9440777181197366 1.174892020750555 0.8040708781384869 0.8317615636019062 0.94569005490928 1.0 19.317409177261464 -6.788578516528614 24.999825446044984 0.8813607883808983 1.0121474844215448 0.36672889216782045 0.07912033939012238 233.0077014724359 214638.08316396727 0.032649633631570085 0.022018750463642885 1.6271271191289743e-07 6.788578516528614 0.13078669604064652 RPPTPCS(ph)DPER ddPTM_KYSE-520_SHP099_60min_R1 4 RPPTPCSDPER 11 1 Q9BW71;Q9BW71-2;Q9BW71-3 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 RPPT(0.117)PCS(0.883)DPER;RPPT(0.247)PCS(0.753)DPER;RPPT(0.008)PCS(0.992)DPER;RPPT(0.112)PCS(0.888)DPER 78.985 0.016737000000000002 4367300000.0 4371180.0 4155450.0 3917190.0 3932680.0 3739100.0 3822370.0 3239910.0 2821990.0 3507960.0 3063280.0 True False 4128701.931668707 3955815.944542389 4169698.3351256065 4306440.724796641 4033345.897431191 3798513.1709938436 3567431.721274472 2812201.1753474157 2871002.892475263 3036141.722395779 1.3598515185288529 1.3029088580953683 1.373354314908381 1.4183925252996705 1.3284445412016312 1.2510987688665889 1.1749885372476812 0.9262417345684196 0.9456089850146366 1.0 21.533807704420607 -6.939629640456166 1.5939323347983039 0.9428196504521209 1.355727651072338 0.9431510961768812 0.042157544872790456 0.08449050217473573 0.4242802957366855 0.027668602738576676 0.014227989316994313 1.1491331665645407e-07 6.939629640456166 0.41290800062021704 RPQHNSSGAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 RPQHNSSGASPR 12 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 RPQHNSSGAS(1)PR;RPQHNS(0.001)S(0.006)GAS(0.993)PR;RPQHNS(0.005)S(0.084)GAS(0.911)PR;RPQHNSSGAS(1)PR 145.7 1.7178e-05 1671460000.0 397684.0 658058.0 853980.0 313734.0 336665.0 710460.0 299619.0 272706.0 278503.0 718600.0 True False 375623.6757566003 626443.9059148037 909028.9172163105 343551.1850324331 363158.6201381807 706025.7556082439 329907.4125196486 271760.0465360587 227933.87568930024 712233.7630623399 0.5273881908399827 0.8795481742136575 1.2763069716153652 0.48235734227943783 0.5098868362779292 0.9912837501168101 0.46320102981522476 0.3815601851948042 0.32002677703633353 1.0 19.44199130194915 -5.315436129541998 24.99998508769803 0.5746199115512162 0.8929304889007709 0.19862330844824394 0.27614159183469766 474.8416939496102 219846.15371995574 0.0792151361805611 0.11749511556961896 4.8368639345791665e-06 5.315436129541998 0.3183105773495547 RPQS(ph)PGAS(ph)PSQAER ddPTM_KYSE-520_SHP099_60min_R1 3 RPQSPGASPSQAER 14 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 2 RPQS(0.999)PGAS(0.945)PS(0.056)QAER;RPQS(1)PGAS(0.99)PS(0.01)QAER;RPQS(0.988)PGAS(0.648)PS(0.363)QAER 111.34 0.00018479 2167710000.0 824620.0 747670.0 667940.0 663750.0 731300.0 716740.0 704930.0 694070.0 833080.0 744960.0 True False 778876.6847607852 711750.8109244506 710996.4811417864 726832.600436285 788849.149472181 712266.5597987964 776191.2038538149 691662.4331671558 681813.6722377945 738360.2339701101 1.0548735548403265 0.9639614624116707 0.9629398340140954 0.9843875211536762 1.0683797869646847 0.9646599681689115 1.051236467164937 0.9367547185580899 0.923416024955368 1.0 19.49396532996791 -7.288776039482918 24.90413793558526 0.9475640168152915 1.003678633767123 0.25030242204053665 0.04201203921770549 983.5341179135623 896009.7281583501 0.022463837925772688 0.010795411811243478 5.143088061637903e-08 7.288776039482918 0.05611461695183162 RPQS(ph)PGASPS(ph)QAER ddPTM_KYSE-520_SHP099_60min_R1 3 RPQSPGASPSQAER 14 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 2 RPQS(1)PGAS(0.325)PS(0.675)QAER;RPQS(0.975)PGAS(0.049)PS(0.975)QAER;RPQS(0.894)PGAS(0.144)PS(0.962)QAER 210.2 8.333899999999999e-13 2060890000.0 720600.0 660300.0 663510.0 637780.0 677650.0 627060.0 628190.0 687880.0 795190.0 691710.0 True False 680626.8815195133 628578.1968694943 706280.9162535365 698394.4194444504 730977.199698925 623146.2859439029 691693.5757435885 685493.904832399 650803.5411086229 685581.9875422373 0.99277240926284 0.9168534300658955 1.030191762746719 1.0186884021678353 1.0662141260732745 0.9089303646640982 1.0089144527020917 0.9998715212601281 0.9492716450175527 1.0 19.38696968011701 -4.766230303364606 24.999055857137304 0.9981737716428283 0.954812922468715 0.1317780332878774 0.04408483573220251 218.8373579772508 1141915.415464605 0.011483597314705 0.02519704994575912 1.7130486487335178e-05 4.766230303364606 -0.043360849174113314 RPQS(ph)PGASPSQAER ddPTM_KYSE-520_SHP099_60min_R1 2 RPQSPGASPSQAER 14 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 RPQS(1)PGASPSQAER;RPQS(1)PGASPSQAER 132.79 8.8241e-05 577300000.0 176198.0 202993.0 153162.0 136298.0 139761.0 159886.0 174852.0 140878.0 187101.0 172408.0 True False 166423.9456979949 193240.91158129528 163035.06758786453 149251.72094051194 150759.3955686881 158888.09216729947 192527.74655107173 140389.32709917254 153128.17483238535 170880.5992513944 0.9739194878007011 1.1308534288143797 0.9540876395687976 0.8734269518854935 0.882249923216242 0.9298193760050437 1.1266799589567842 0.8215638739224924 0.8961121128040275 1.0 17.382629085888464 -4.921879120464881 7.97606862624332 0.9299244507051233 1.0514971870504775 0.22991366038024175 0.08619898578531932 0.3427294510417503 30.496139315095867 0.0228311859743473 0.04785652255502915 1.1970736729408118e-05 4.921879120464881 0.12157273634535415 RPQS(ph)PSPR ddPTM_KYSE-520_SHP099_60min_R1 5 RPQSPSPR 8 1 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 RPQS(0.952)PS(0.048)PR;RPQS(0.871)PS(0.129)PR;RPQS(0.892)PS(0.108)PR;RPQS(0.998)PS(0.002)PR;RPQS(0.887)PS(0.113)PR 105.86 0.0011212 3530230000.0 542627.0 554739.0 631853.0 421609.0 440968.0 555387.0 433202.0 432188.0 479068.0 503153.0 True False 512526.3986098931 528088.5057597857 672583.2553805455 461678.59259863227 475669.672835291 551920.6237226529 476994.28580409416 430688.8407014377 392081.32752150524 498695.45586711017 1.0277342465828856 1.0589398791323816 1.3486853498816962 0.9257726076446504 0.9538279670269244 1.1067288005722793 0.9564841231101997 0.8636309708348444 0.7862139566517027 1.0 18.92779953160496 -6.516553288098675 0.8210733217721611 0.8726574608624476 1.1064995009804073 0.3138323160209857 0.12031751784292764 0.7578316997036791 1.0605071647292914 0.09192440473908046 0.06787489355206895 3.044014465370576e-07 6.516553288098675 0.23384204011795973 RPQSPGAS(ph)PS(ph)QAER ddPTM_KYSE-520_SHP099_60min_R1 1 RPQSPGASPSQAER 14 1 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 2 RPQS(0.557)PGAS(0.795)PS(0.648)QAER 119.47 0.00012183 464220000.0 262440.0 215990.0 225840.0 219770.0 233250.0 228490.0 201570.0 235540.0 258090.0 248600.0 True False 247881.93003883012 205613.51619240054 240398.00775677626 240656.87472374042 251605.4479890415 227063.9091559382 221946.66273362382 234722.96671544953 211227.3619194461 246397.5974078736 1.0060241359760478 0.8344785759093208 0.9756507786024962 0.9767013853035657 1.0211359633208887 0.9215345910214723 0.9007663429697531 0.9526187316140973 0.8572622628693551 1.0 17.910628662999475 -9.083409629703153 13.121057791440643 0.9999999799691536 0.9388648432794874 0.09215303568701438 0.05793116043794048 0.0 0.0 0.05552936147471213 0.013467848393137779 8.252591919185771e-10 9.083409629703153 -0.06113513668966619 RPRCDDSPR ddPTM_KYSE-520_SHP099_60min_R1 1 RPRCDDSPR 9 2 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3;A0A2R8Y7R5;A0A2R8Y755;A0A2R8Y586;A0A2R8YF51;A0A2R8Y5D2;A0A2R8YCS7 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 0 58.981 0.046751999999999995 52768000.0 15685.0 14985.0 20341.0 10136.0 14653.0 15828.0 18281.0 19384.0 17963.0 13616.0 False True 14814.921782727692 14265.098107056438 21652.213406750718 11099.322392500477 15806.107735834637 15729.21158090152 20129.021885366732 19316.7614282596 14701.372010380144 13495.37283308771 1.0977778803120382 1.0570362363077166 1.6044175788655661 0.8224539277112345 1.171224235990095 1.1655262715185553 1.4915498915313228 1.4313618206159608 1.0893639021469335 1.0 13.720177213858227 -6.5648558167137 24.96492474603438 1.2946618945286523 1.1539689154551283 0.0325097049086871 0.22629227985580405 395.7957718278896 235387.52688937145 0.08506052783325077 0.06588764550847175 2.7236053794188e-07 6.5648558167137 -0.14069297907352407 RPRPPNAPS(ph)QDGK ddPTM_KYSE-520_SHP099_60min_R1 4 RPRPPNAPSQDGK 13 2 P16989-2;P16989 P16989-2 YBX3 Y-box-binding protein 3 1 RPRPPNAPS(1)QDGK;RPRPPNAPS(1)QDGK;RPRPPNAPS(1)QDGK;RPRPPNAPS(1)QDGK 118.31 8.5145e-05 4263350000.0 1479100.0 1264760.0 1345650.0 1264460.0 1352040.0 1417350.0 1559670.0 1434870.0 1712170.0 1677760.0 True False 1397051.374487249 1203999.0311565353 1432392.7521161244 1384633.8982262397 1458437.8559447124 1408503.7929107114 1717336.6645123335 1429892.7708711748 1401283.0882933007 1662896.3516775263 0.8401313606094009 0.7240373279681224 0.8613842652737373 0.832663982231619 0.8770467590920165 0.8470183914287958 1.0327382478047342 0.8598808755751385 0.8426761456778045 1.0 20.66526681757598 -5.681388490036153 0.9052237443669064 0.91904952663404 0.7874654175302899 0.3674256308174587 0.06580015837582188 0.6930234518971498 1.2076650109046385 0.031717236496836915 0.05677507177335091 2.0826270743621395e-06 5.681388490036153 -0.13158410910375018 RPRPS(ph)TPAEEDEDDPEQEK ddPTM_KYSE-520_SHP099_60min_R1 1 RPRPSTPAEEDEDDPEQEK 19 2 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 RPRPS(0.5)T(0.5)PAEEDEDDPEQEK 82.302 0.00067418 0.0 152680.0 132150.0 112470.0 105920.0 162200.0 150930.0 130420.0 121860.0 152010.0 165300.0 True False 144210.53603996578 125801.31563880612 119719.99615836247 115986.60495399071 174964.2172082424 149987.9898853593 143604.12637654017 121437.29610233787 124408.81586026194 163835.57060145406 0.8802150565384358 0.7678510544259649 0.7307326224632439 0.707945194857223 1.0679257048144926 0.9154787897081255 0.8765137256174433 0.7412144728799211 0.7593516804900595 1.0 17.321889091239303 -3.9421081295730374 18.243767245394288 0.8349680930578482 1.3951513192457259 0.008008576628161235 0.1165010390787643 64575254.16215953 367295257.8477937 0.030511789339132848 1371640372.8270915 0.00011425938191705116 3.9421081295730374 0.5601832261878776 RPRPTPGDGEK ddPTM_KYSE-520_SHP099_60min_R1 1 RPRPTPGDGEK 11 2 I3L410;I3L4Q4;I3L1N0;Q9BUL5-3;Q9BUL5-4;Q9BUL5 I3L410 PHF23 PHD finger protein 23 0 78.342 0.008518799999999998 163560000.0 132010.0 124900.0 95945.0 70070.0 122300.0 106450.0 77465.0 112240.0 104470.0 87905.0 False True 124687.14214458925 118899.61652127792 102129.76821742777 76729.43173268631 131924.31420818772 105785.60606437751 85295.91818554432 111850.66563701301 85500.88147438699 87126.23008905511 1.4311091162459533 1.3646822133787493 1.172204606041567 0.8806697093889885 1.5141744807888822 1.2141648497387059 0.9789924124842776 1.2837771762038377 0.9813448990848475 1.0 16.410819499320777 -1.0000000000031204 0.5366381867229228 1.122394519490735 14.885176695371179 0.2564791978054014 0.1772718731191915 190.06734830867418 1.81859432460366 0.09075848620623184 2998.338169857219 0.0999999999992815 1.0000000000031204 13.762782175880444 RPRS(ph)PGAEAPR ddPTM_KYSE-520_SHP099_60min_R1 1 RPRSPGAEAPR 11 2 K7EMY1 K7EMY1 KEAP1 1 RPRS(1)PGAEAPR 57.434 0.037932 113350000.0 21278.0 16806.0 16317.0 20517.0 16525.0 17964.0 18039.0 16214.0 19375.0 17117.0 True False 20097.666923358604 15998.61453367972 17368.819928123085 22466.92951133903 17825.423485611635 17851.880012592534 19862.558163674348 16157.757418376046 15856.988404003538 16965.356696824485 1.184629788958131 0.9430166909885416 1.0237815943695494 1.3242827671017556 1.0506954733788847 1.0522549175717588 1.1707716211703436 0.9523971530407255 0.9346687303646019 1.0 14.050304142597453 -7.278933844908946 23.677307592808443 0.9576496499456629 1.1016280752627237 0.304440416737498 0.09992196038986996 559.4260042299787 757129.8016536589 0.05559086300471853 0.026825916403924635 5.260973995080813e-08 7.278933844908946 0.14397842531706073 RPS(ph)APMTR ddPTM_KYSE-520_SHP099_60min_R1 1 RPSAPMTR 8 1 Q6ZTW0 Q6ZTW0 TPGS1 Tubulin polyglutamylase complex subunit 1 1 RPS(1)APMTR 72.34 0.013194999999999998 352290000.0 168710.0 128360.0 137530.0 117970.0 101990.0 138720.0 100500.0 132580.0 165910.0 159230.0 True False 159351.3199849529 122193.39292771202 146395.40385578037 129181.83333102614 110016.0327562803 137854.19702442875 110659.52078547997 132120.11092440452 135784.9262507473 157819.3460790654 1.009707136317242 0.7742611787688864 0.9276138033320592 0.8185424445131572 0.6971010556662915 0.8734936523901551 0.7011784266932712 0.837160425555268 0.8603820103444152 1.0 17.26791454152185 -4.25185977711408 23.98972664813749 0.8226340250772444 1.0097073152044163 0.2571079259716611 0.0892013111318572 944.1784146241645 2364372.587021954 0.021077708223288246 0.25574819060952975 5.599383624817217e-05 4.25185977711408 0.1870732901271719 RPS(ph)ASS(ph)PNNNTAAK ddPTM_KYSE-520_SHP099_60min_R1 2 RPSASSPNNNTAAK 14 1 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 2 RPS(0.999)AS(0.414)S(0.585)PNNNT(0.002)AAK;RPS(1)AS(0.036)S(0.964)PNNNTAAK 189.59 2.2279e-09 0.0 474530.0 544730.0 556210.0 530060.0 610360.0 729770.0 801170.0 1025790.0 1015370.0 872930.0 True False 448206.8749478968 518560.35314360034 592064.1865674653 580436.7430316504 658391.859526651 725215.2347355632 882160.0822657003 1022231.773911185 831004.4033947381 865196.5193292632 0.518040543315368 0.5993555701606499 0.6843117989268592 0.6708727208953977 0.7609737727991139 0.838208682690703 1.0196066009946363 1.1815024113870247 0.9604805207017796 1.0 19.722668335811008 -6.291131955759788 1.0260413166375504 1.0709666120629249 0.5971788615387196 0.8800781218511937 0.06985254205913687 0.16527773301240067 0.3655545450305809 0.04059842023930242 0.03577938973755906 5.115263900725212e-07 6.291131955759788 -0.4737877505242053 RPS(ph)ASSPNNNTAAK ddPTM_KYSE-520_SHP099_60min_R1 4 RPSASSPNNNTAAK 14 1 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 RPS(0.333)AS(0.333)S(0.333)PNNNTAAK;RPS(0.333)AS(0.333)S(0.333)PNNNTAAK;RPS(0.983)AS(0.017)SPNNNTAAK;RPS(0.657)AS(0.225)S(0.119)PNNNTAAK 172.57 2.0982e-08 4540080000.0 1816760.0 1499350.0 1460690.0 1126210.0 1202510.0 1436100.0 1355440.0 1416890.0 1553010.0 1305480.0 True False 1715980.7011787281 1427318.9754297682 1554848.4145866325 1233244.6597926167 1297140.695654031 1427136.7672057538 1492461.103019612 1411975.1392946132 1271022.5321962067 1293914.4628480722 1.3261933075557668 1.1031014927277771 1.2016624430986043 0.9531114267616165 1.0024933895544048 1.102960673354282 1.1534464957865245 1.0912430302283462 0.9823080031105941 1.0 20.30331081717719 -3.283064316277717 0.9523785224947634 1.0564236722024325 2.601215673643934 0.5592070906587252 0.07233054787539145 8.951197720745128 1.5844256227768279 0.024485162286377638 22.090682595373707 0.0005211175311657622 3.283064316277717 1.5447920014415013 RPS(ph)DENTIAPSEVQK ddPTM_KYSE-520_SHP099_60min_R1 4 RPSDENTIAPSEVQK 15 1 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 RPS(1)DENTIAPSEVQK;RPS(0.999)DENT(0.001)IAPSEVQK;RPS(1)DENTIAPSEVQK;RPS(1)DENTIAPSEVQK 214.82 4.1245e-14 1255960000.0 3062510.0 2568760.0 2445900.0 2431200.0 2500180.0 2527460.0 2709010.0 2547080.0 2911840.0 2675600.0 True False 2892626.465337671 2445352.913812633 2603566.6275783717 2662260.5170330657 2696929.941921723 2511685.1846263143 2982863.168189783 2538244.7739729406 2383123.257512962 2651896.2655853042 1.0907766276065987 0.9221148449684609 0.9817754417342318 1.0039082416541938 1.0169816885075176 0.9471279918530132 1.1248038646532166 0.9571433117172555 0.8986487474791851 1.0 21.338592911873963 -7.50164843796875 24.917360980945695 0.942181553188323 1.0077257664020995 0.16591744206626946 0.06133334304461671 1169.6201880163412 1372755.8787726085 0.03273597622732185 0.015467535716305159 3.150297452685885e-08 7.50164843796875 0.06554421321377657 RPS(ph)DSGPPAER ddPTM_KYSE-520_SHP099_60min_R1 9 RPSDSGPPAER 11 1 Q9BST9;Q9BST9-3;Q9BST9-2 Q9BST9 RTKN Rhotekin 1 RPS(0.979)DS(0.021)GPPAER;RPS(0.996)DS(0.004)GPPAER;RPS(0.901)DS(0.099)GPPAER;RPS(0.953)DS(0.047)GPPAER;RPS(0.5)DS(0.5)GPPAER;RPS(0.958)DS(0.042)GPPAER;RPS(0.934)DS(0.066)GPPAER;RPS(0.997)DS(0.003)GPPAER;RPS(0.984)DS(0.016)GPPAER 156.6 3.2690999999999996e-05 13326373000.0 5192084.0 4792762.0 4812577.0 4283529.0 4365360.0 4715059.0 4850474.0 4760299.0 5832824.0 5261331.0 True False 4904068.750357155 4562510.519437574 5122803.413815451 4690634.308270047 4708888.996499224 4685630.567818673 5340807.247984376 4743786.633831143 4773730.195127406 5214719.700593576 0.9404280636213178 0.874929196849878 0.9823736860165921 0.8994988374420444 0.9029994451980277 0.898539295848504 1.0241791610345705 0.9096915857799935 0.9154337086582097 1.0 22.314158277020006 RPS(ph)DSGPPAERS(ph)PCR ddPTM_KYSE-520_SHP099_60min_R1 1 RPSDSGPPAERSPCR 15 2 Q9BST9;Q9BST9-3;Q9BST9-2 Q9BST9 RTKN Rhotekin 2 RPS(0.996)DS(0.014)GPPAERS(0.989)PCR 63.165 0.017646000000000002 95631000.0 30429.0 27830.0 38800.0 29228.0 23514.0 37703.0 54653.0 36890.0 40284.0 47755.0 True False 28741.042711292368 26493.00502631837 41301.11008219498 32005.820332281353 25364.41802364126 37467.68159178225 60177.85860187891 36762.03720019073 32969.441077000185 47331.9278528278 0.6072231581324711 0.5597279939387799 0.8725845735803361 0.6761993813520358 0.5358838985495895 0.791594242860399 1.2714009619256115 0.7766858200768262 0.6965581706182385 1.0 15.530526064504905 -6.524169233127907 24.998470081429712 0.9338297030376979 0.6595423351122013 0.39908955827238557 0.16522133747013135 48.760340046242746 944506.1709618015 0.06468175565628509 0.05050337542653687 2.9910988569945783e-07 6.524169233127907 -0.2742873679254966 RPS(ph)DSSRPK ddPTM_KYSE-520_SHP099_60min_R1 7 RPSDSSRPK 9 2 G3V4X8;Q13573 G3V4X8 SNW1 SNW domain-containing protein 1 1 RPS(0.807)DS(0.096)S(0.096)RPK;RPS(0.967)DS(0.028)S(0.005)RPK;RPS(0.994)DS(0.005)S(0.001)RPK;RPS(0.991)DS(0.007)S(0.002)RPK;RPS(0.515)DS(0.17)S(0.315)RPK;RPS(0.999)DS(0.001)SRPK;RPS(0.972)DS(0.014)S(0.014)RPK 81.92 0.0065952 18811480000.0 1866050.0 1537570.0 1458960.0 1412190.0 1622300.0 1538940.0 1576340.0 1595130.0 1771800.0 1726650.0 True False 1762536.486621549 1463702.8292603772 1553006.8960185342 1546404.1130095948 1749965.7803756574 1529334.9046191918 1735691.830795853 1589596.8663361412 1450085.7834432742 1711353.2243133713 1.029908064320686 0.8552897253853854 0.9074730300880061 0.9036148067153364 1.0225625870297923 0.8936407066009363 1.0142218486147105 0.9288537537152325 0.8473328374538677 1.0 20.706706132992093 -4.223504272266245 23.02548940727497 0.9309167125953802 1.029908766882629 0.2007982806643065 0.05958663995877993 12554.560690889113 7619836.03486747 0.014539085294646398 3.242368686274191 5.977171647626724e-05 4.223504272266245 0.09899205428724878 RPS(ph)EGNEPSTK ddPTM_KYSE-520_SHP099_60min_R1 2 RPSEGNEPSTK 11 1 F2Z329;A0A087WWU1;Q96Q45-2;Q96Q45;Q96Q45-5;Q96Q45-3 F2Z329 TMEM237 Transmembrane protein 237 1 RPS(1)EGNEPSTK;RPS(0.999)EGNEPS(0.001)TK 92.773 0.0016577000000000002 459050000.0 1278400.0 1470010.0 1377900.0 1657140.0 1561990.0 1557420.0 1649790.0 1829450.0 2235480.0 1458850.0 True False 1207484.6035727817 1399388.513070007 1466721.6387179508 1814634.087362693 1684909.7264926173 1547699.5640843832 1816566.8735987751 1823104.0649468412 1829573.183864866 1445925.7239681238 0.8350944889887036 0.9678149367379658 1.0143824225581628 1.2549981353002733 1.165280967454288 1.0703866308132042 1.2563348472793492 1.2608559587304449 1.2653299913939424 1.0 20.46356201344232 -4.845580563832856 1.622770737423445 1.191453954664665 0.851231633804528 0.6239633145576451 0.08906914343003065 0.27654662715115774 1.3251035038026961 0.026421354712477297 0.10529687196871185 1.4269850926259959e-05 4.845580563832856 -0.34022232086013693 RPS(ph)ES(ph)DKEDELDK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSESDKEDELDK 13 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 2 RPS(1)ES(1)DKEDELDK 52.784 0.056267 1051500000.0 1099500.0 878110.0 685570.0 955420.0 1025500.0 989110.0 961340.0 1069600.0 1048400.0 1081400.0 True False 1038508.543201089 835924.2775300187 729762.9391507844 1046222.8295425037 1106201.015703161 982936.5975982749 1058521.628974261 1065889.8072465174 858036.9880132801 1071819.6373164677 0.9689209891705471 0.7799113287595065 0.6808635648605056 0.9761183627517301 1.0320775783440341 0.9170727642752183 0.987593054018397 0.9944675112644914 0.8005423283357276 1.0 20.031630723028986 -5.293083486101531 24.86062324494519 0.960617756675309 0.8068998678855688 0.3683603753115632 0.08896960355487296 615.6996128638964 483711.9755558434 0.025048728097157365 0.037157164994842375 5.0923296983173946e-06 5.293083486101531 -0.15371788878974024 RPS(ph)ES(ph)DKEDELDKVK ddPTM_KYSE-520_SHP099_60min_R1 13 RPSESDKEDELDKVK 15 3 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 2 RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK;RPS(1)ES(1)DKEDELDKVK 138.04 2.9057e-05 216498550000.0 30735460.0 26360880.0 25512440.0 24865140.0 26162780.0 26293890.0 24088490.0 26860050.0 29883600.0 24630120.0 True False 29030502.764179487 25094463.756312437 27157012.70374728 27228315.429623034 28221641.94014464 26129780.079286728 26523589.650207214 26766878.75573277 24457491.544251844 24411916.29874338 1.1891939333608912 1.0279596017459798 1.1124490339640074 1.1153698503801863 1.156060081264385 1.0703698865554352 1.0865017447062333 1.0964677425635208 1.001866926174526 1.0 24.541082213168426 -7.750236587697332 4.685356786963004 0.9978465725270299 1.1050229141921257 0.5088410569693949 0.04164784865482234 0.14713777473687564 7.902653051461789 0.03366497526244154 0.01026535138027355 1.7773109324896525e-08 7.750236587697332 0.10717634166509582 RPS(ph)ESDKEDELDK ddPTM_KYSE-520_SHP099_60min_R1 7 RPSESDKEDELDK 13 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 RPS(0.925)ES(0.075)DKEDELDK;RPS(0.677)ES(0.323)DKEDELDK;RPS(0.769)ES(0.231)DKEDELDK;RPS(0.833)ES(0.167)DKEDELDK;RPS(0.879)ES(0.121)DKEDELDK;RPS(0.5)ES(0.5)DKEDELDK;RPS(0.999)ES(0.001)DKEDELDK 192.72 1.5839e-08 14916260000.0 12120030.0 9711820.0 9287500.0 11947460.0 12474560.0 12189030.0 12752770.0 13561970.0 13136280.0 12221780.0 True False 11447707.775219187 9245249.589460973 9886187.110525407 13082943.006265154 13456236.901462728 12112953.742478888 14041944.446641227 13514926.691457588 10751062.690670619 12113504.537600957 0.9450368173541273 0.763218403127124 0.8161293934251778 1.0800295625147132 1.1108459042297676 0.9999545304894749 1.1591975223234772 1.1156908927145355 0.8875270288048147 1.0 23.530112973304767 -5.261087354388627 24.999960050168717 1.0602260532570713 0.8336372130096086 0.5628451885206234 0.08401562038562926 21.103151392620358 1498643.4903922698 0.02287355247990148 0.036680499322853846 5.481666950817799e-06 5.261087354388627 -0.22658884024746273 RPS(ph)ESDKEDELDKVK ddPTM_KYSE-520_SHP099_60min_R1 8 RPSESDKEDELDKVK 15 3 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 RPS(0.977)ES(0.023)DKEDELDKVK;RPS(0.867)ES(0.133)DKEDELDKVK;RPS(0.87)ES(0.13)DKEDELDKVK;RPS(0.87)ES(0.13)DKEDELDKVK;RPS(0.71)ES(0.29)DKEDELDKVK;RPS(0.996)ES(0.004)DKEDELDKVK;RPS(0.993)ES(0.007)DKEDELDKVK;RPS(0.702)ES(0.298)DKEDELDKVK 224.86 1.0362999999999999e-14 66361900000.0 25843870.0 22012320.0 22746440.0 23482510.0 24015490.0 23219810.0 23834780.0 24657310.0 28858930.0 21653910.0 True False 24410259.012622394 20954815.10603407 24212711.91799083 25714280.690125946 25905372.433553502 23074886.552838814 26244232.167436186 24571779.546669405 23618875.786423177 21462073.20388708 1.1373672422383387 0.9763649069204956 1.1281627682457802 1.1981265950331739 1.2070302895463836 1.0751471367015761 1.2228190593760062 1.1448931011109922 1.10049367374935 1.0 24.35528610920154 -8.122755396611444 3.5962160321896937 1.0000495030255596 1.1356110945866529 0.2690506660102764 0.06767223069269782 0.8307000965491391 20.7855891444734 0.06906193955071001 0.018228532189058205 7.537799882528462e-09 8.122755396611444 0.13556159156109326 RPS(ph)GRS(ph)PTSTEK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSGRSPTSTEK 12 2 A1L390-3;A1L390;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 2 RPS(0.996)GRS(0.973)PT(0.019)S(0.002)T(0.009)EK 98.281 0.0013099000000000001 849460000.0 476310.0 543370.0 508440.0 635020.0 671980.0 832650.0 987710.0 1159400.0 1407300.0 1067100.0 True False 449888.1347995548 517265.6895850024 541214.855932763 695372.109874276 724861.0029568112 827453.1224941645 1087557.36592066 1155378.3120059934 1151769.7951460204 1057646.3241912385 0.4253672749664927 0.4890724600026813 0.5117162926336641 0.6574713058318559 0.6853529259992449 0.7823533288662462 1.0282807598771677 1.0924051694591657 1.0889933324608831 1.0 20.012425841729996 -6.24684080926139 0.822937314577819 1.0970399284130479 0.46123028168281793 0.9541613586929935 0.05284928288053701 0.12103915471483617 0.17817870811001602 0.03615956616241079 0.034801805054538865 5.664468822195052e-07 6.24684080926139 -0.6358096467302299 down RPS(ph)GRSPTST(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSGRSPTSTEK 12 2 A1L390-3;A1L390;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 2 RPS(0.999)GRS(0.009)PT(0.141)S(0.283)T(0.568)EK 75.67399999999999 0.044592 1133700000.0 638600.0 636650.0 568720.0 638920.0 792360.0 963280.0 1097400.0 1241000.0 1606900.0 1237800.0 True False 603175.5849824605 606064.3783688673 605380.6011841741 699642.7647016969 854714.2240883048 957267.8122094261 1208335.9015918963 1236695.2606515775 1315127.4666525566 1226834.0549938264 0.4916521370818124 0.4940068103765811 0.4934494593787751 0.5702831298608007 0.6966828322128747 0.7802748939947246 0.9849220411459615 1.0080379295126436 1.0719685040526319 1.0 20.226508688554627 -6.32167504804039 0.9652436252637275 1.0498716672482584 0.48421496769902106 0.9833308763030204 0.029476857764381616 0.059331229912576965 0.11678554797221692 0.01729388839140724 0.014885105962513377 4.7678759994023023e-07 6.32167504804039 -0.5656566995492374 down RPS(ph)GRSPTSTEK ddPTM_KYSE-520_SHP099_60min_R1 2 RPSGRSPTSTEK 12 2 A1L390-3;A1L390;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RPS(0.956)GRS(0.04)PT(0.003)S(0.001)TEK;RPS(0.827)GRS(0.173)PTSTEK 80.632 0.0071132 1590830000.0 274370.0 269780.0 353080.0 173406.0 207370.0 206390.0 133345.0 125923.0 323800.0 173304.0 True False 259150.149156965 256819.3638519645 375840.101747974 189886.45410358525 223688.8392260992 205101.84345351683 146824.81392178926 125486.2025036491 265006.08233374666 171768.66138847166 1.5087161247118968 1.495146796720633 2.188059793386727 1.1054778710427184 1.3022680471393147 1.1940585773656285 0.85478231439279 0.7305535333936716 1.5428081012659778 1.0 17.390107320089072 -5.347436743196059 11.323986718282054 1.0941139233521608 1.706875203980589 0.5166092536569975 0.27725186845936295 0.575271612913419 73.90646522622879 0.0790701318955251 0.11729809836243857 4.493277663688181e-06 5.347436743196059 0.6127612806284282 RPS(ph)GTGTGPEDGRPSLGSPYGQPPR ddPTM_KYSE-520_SHP099_60min_R1 8 RPSGTGTGPEDGRPSLGSPYGQPPR 25 2 P50479;P50479-2;C9J542 P50479 PDLIM4 PDZ and LIM domain protein 4 1 RPS(0.947)GT(0.05)GT(0.004)GPEDGRPSLGSPYGQPPR;RPS(0.937)GT(0.051)GT(0.012)GPEDGRPSLGSPYGQPPR;RPS(0.883)GT(0.108)GT(0.01)GPEDGRPSLGSPYGQPPR;RPS(0.824)GT(0.172)GT(0.004)GPEDGRPSLGSPYGQPPR;RPS(0.854)GT(0.111)GT(0.034)GPEDGRPS(0.001)LGSPYGQPPR;RPS(0.996)GT(0.004)GTGPEDGRPSLGSPYGQPPR;RPS(0.852)GT(0.144)GT(0.005)GPEDGRPSLGSPYGQPPR;RPS(0.979)GT(0.021)GTGPEDGRPSLGSPYGQPPR 179.67 4.9968999999999994e-11 73222000000.0 5235660.0 4575868.0 3829500.0 3956340.0 3899245.0 4679320.0 4378190.0 4345438.0 4981630.0 4444670.0 True False 4945227.502770551 4356036.432762103 4076355.697416642 4332349.364083001 4206093.397830791 4650114.628174381 4820780.1722167125 4330364.689810849 4077091.5686728302 4405293.6817009365 1.1225647732210078 0.9888186231162199 0.9253312019467252 0.9834416674827068 0.9547816108838328 1.0555742622768607 1.0943152762417765 0.9829911471733805 0.9254982444436296 1.0 22.070806769857 RPS(ph)ILPEGSSDSR ddPTM_KYSE-520_SHP099_60min_R1 1 RPSILPEGSSDSR 13 1 A0A2R8YFR7;A0A2R8YF49;H0Y895;Q12774 A0A2R8YFR7;Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 RPS(0.937)ILPEGS(0.059)S(0.004)DSR 116.0 0.00042017 0.0 399600.0 413050.0 342490.0 297800.0 300830.0 302720.0 384970.0 356660.0 499470.0 386720.0 True False 377433.39141714905 393206.4579993095 364567.4534033752 326102.822463165 324503.6095114398 300830.6121917176 423886.5245451363 355422.8297050701 408778.83861407224 383293.9616636069 0.9847099854612337 1.025861342278077 0.9511432213047312 0.8507903987002148 0.8466181102958159 0.7848561216201412 1.1059045196155606 0.92728523079892 1.066489116707849 1.0 18.548091744825207 -9.478758196115097 7.7615461998630195 0.9999995770965122 0.9448076360084339 0.022339150555391374 0.09660878562345321 0.0 0.0 0.09804608229965796 0.02377966785291129 3.320792992169687e-10 9.478758196115097 -0.055191941088078345 RPS(ph)LEHR ddPTM_KYSE-520_SHP099_60min_R1 1 RPSLEHR 7 1 Q8WU20 Q8WU20 FRS2 Fibroblast growth factor receptor substrate 2 1 RPS(1)LEHR 55.676 0.047717 106640000.0 45243.0 46109.0 34659.0 44885.0 45186.0 39963.0 49725.0 42698.0 57595.0 54991.0 True False 42733.28060031549 43893.85442898001 36893.17459636074 49150.85690483269 48741.88112682887 39713.576093477815 54751.68826923372 42549.89060378814 47137.19985179782 54503.82252235058 0.7840419005986543 0.8053353397549374 0.6768915075861298 0.9017873358272664 0.8942837194004349 0.7286383643494422 1.0045476763906145 0.7806771825286116 0.8648420912582434 1.0 15.734069793671154 -13.999999952187581 0.05849021690014828 1.6395272577799211 0.5491374649816267 0.3288887992652768 0.08463986182164403 507.4101918750877 2.1676129162987032 47.13002394473309 8.194925613797672 1.000000110092169e-14 13.999999952187581 -1.0903897927982944 RPS(ph)LGELLLR ddPTM_KYSE-520_SHP099_60min_R1 4 RPSLGELLLR 10 1 Q8N612;Q8N612-2 Q8N612 FAM160A2 FTS and Hook-interacting protein 1 RPS(1)LGELLLR;RPS(1)LGELLLR;RPS(1)LGELLLR;RPS(1)LGELLLR 132.9 0.00033410000000000004 1485946000.0 1029496.0 797330.0 714151.0 659448.0 679021.0 755769.0 793954.0 623263.0 719327.0 879197.0 True False 972387.8046306048 759025.0699832708 760186.3161420008 722121.7396497286 732456.0895990022 751051.9653327231 874214.6185643267 621101.0461236784 588715.3495580199 871407.9985849148 1.1158812016984831 0.8710329388941307 0.8723655479138043 0.8286838551199747 0.8405432252038567 0.8618832585337308 1.003220787488719 0.7127557322543384 0.6755909407694658 1.0 19.73298883013404 -4.212510240068111 2.7702822778758467 0.844242269368578 1.1870514473688412 0.39395328761990867 0.09834937520533528 0.5815903629222379 5.439560603869566 0.025784883132062217 0.4780820486946149 6.130413373056549e-05 4.212510240068111 0.3428091780002631 RPS(ph)LLSEFQPGNER ddPTM_KYSE-520_SHP099_60min_R1 1 RPSLLSEFQPGNER 14 1 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J330 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 RPS(0.999)LLS(0.001)EFQPGNER 123.0 5.5023999999999994e-05 291760000.0 152800.0 159630.0 179430.0 168860.0 190420.0 204980.0 177390.0 213160.0 255790.0 203420.0 True False 144323.87940075167 151961.13519048513 190996.34489815077 184908.40363038977 205404.97065840667 203700.6437865296 195322.31235956482 212420.59771191803 209344.98394116436 201617.85705836536 0.7158288531901817 0.75370871116091 0.9473185941206596 0.9171231473651739 1.0187836219236523 1.010330368344116 0.9687748655270249 1.0535802771201235 1.038325607639814 1.0 17.621263896750072 -4.637069652463725 0.9055770430589805 1.0177928136189935 0.6165010158244124 0.9028004439575554 0.03466483031240288 0.35387978225176 0.33824177512245646 0.012459996304099812 0.12560831349235696 2.306377260599789e-05 4.637069652463725 -0.40129179779458113 RPS(ph)LPALHFIK ddPTM_KYSE-520_SHP099_60min_R1 2 RPSLPALHFIK 11 1 P00519-2;R4GRW0 P00519-2 ABL1 Tyrosine-protein kinase ABL1 1 RPS(1)LPALHFIK;RPS(1)LPALHFIK 145.7 4.8169e-05 2414300000.0 2622200.0 2505000.0 2210400.0 1940440.0 1857490.0 1968880.0 1937280.0 1811580.0 2159800.0 2132460.0 True False 2476741.3387738937 2384656.0399183445 2352885.9207650484 2124858.8341854424 2003663.8953276128 1956591.489601048 2133119.1684307903 1805296.051805951 1767634.7641273197 2113568.0634287754 1.1718294677276462 1.1282608216788588 1.1132293118339587 1.0053420426585886 0.9480006487593929 0.9257291134627246 1.0092502840766329 0.8541461630893853 0.8363273436577865 1.0 21.011249141683443 -5.315967978928543 0.9469912136534573 0.9125631798193469 1.1808125973108399 0.7711149253254399 0.051346488327876603 0.3207219502384432 0.5413110098323176 0.021896455623037357 0.06286032572105676 4.830944198781662e-06 5.315967978928543 0.268249417491493 RPS(ph)LPCISR ddPTM_KYSE-520_SHP099_60min_R1 1 RPSLPCISR 9 1 Q13370-2;Q13370 Q13370-2 PDE3B cGMP-inhibited 3,5-cyclic phosphodiesterase B 1 RPS(1)LPCISR 66.708 0.018884 0.0 83817.0 72984.0 73564.0 67602.0 76049.0 83669.0 68388.0 76750.0 74057.0 64439.0 True False 79167.50392495285 69477.7390887825 78306.05314656161 74026.87375471764 82033.62364038009 83146.79073556028 75301.32644256123 76483.77216358471 60610.11562504717 63868.120592783416 1.2395464778072418 1.0878312755085662 1.2260585158882782 1.1590582761422619 1.284422069711712 1.301851220356016 1.1790127178263905 1.1975265821776313 0.9489885573976891 1.0 15.96280837740128 -7.75569076443795 23.916931685353976 0.9744942037936066 1.2088052328517545 0.715878182600508 0.05919755754989247 39.38444430087037 163867.46435569425 0.04437747856760178 0.015699066631827123 1.7551297817274713e-08 7.75569076443795 0.23431102905814782 RPS(ph)LPPSK ddPTM_KYSE-520_SHP099_60min_R1 5 RPSLPPSK 8 1 H0YJA2;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-11;G3V5I6;A0A087WTC9;H0YJ87;Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4 H0YJA2;Q6PJT7-5 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 RPS(0.999)LPPS(0.001)K;RPS(1)LPPSK;RPS(1)LPPSK;RPS(1)LPPSK;RPS(1)LPPSK 122.33 0.00059849 2972260000.0 2480060.0 2236520.0 2367070.0 2434620.0 2652290.0 3615290.0 3922810.0 4609340.0 5147970.0 4016940.0 True False 2342486.1279229573 2129074.222115039 2519655.1196459075 2666005.552804804 2861010.133534216 3592725.634086264 4319365.9177362 4593351.275368043 4213228.417762999 3981353.0367320315 0.5883643340118648 0.5347614749237668 0.6328640279823281 0.6696229970585856 0.7186024718578049 0.9023881079973857 1.0848989973724148 1.1537161444839745 1.0582403466589578 1.0 21.924827373875853 -6.299045958910447 1.3566598051084933 1.0967079862728335 0.5911422891593999 0.9506336661497797 0.04859498227643037 0.08391308999579242 0.31207947962174076 0.023942862294626614 0.020943549228203566 5.022894322811571e-07 6.299045958910447 -0.5055656971134336 RPS(ph)LPS(ph)SPSPGLPK ddPTM_KYSE-520_SHP099_60min_R1 2 RPSLPSSPSPGLPK 14 1 O43294-2;O43294;H3BQC4;H3BSN4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 2 RPS(1)LPS(0.546)S(0.403)PS(0.051)PGLPK;RPS(0.991)LPS(0.557)S(0.412)PS(0.04)PGLPK 112.96 0.00017225 1005450000.0 1262870.0 1284940.0 1071280.0 1278460.0 1337410.0 1424660.0 1585590.0 1843910.0 1876270.0 1732210.0 True False 1192816.0836310692 1223209.5536657383 1140336.422908603 1399964.4540169868 1442656.5581780246 1415768.1684892066 1745876.9110671545 1837513.9065818314 1535586.6649176625 1716863.9670389863 0.6947644697140894 0.7124673690807105 0.6641973067180741 0.8154195561757028 0.8402858851223505 0.8246245454908878 1.0168988018766598 1.0702734414951498 0.8944137068506561 1.0 20.711344303566385 -6.113487303442173 0.8690770050415055 1.0056755709451137 0.6875875413776804 0.8110440599943267 0.05835339264895581 0.2462352197587429 0.40694180194905005 0.03535703446310932 0.03858166901794172 7.700389560433678e-07 6.113487303442173 -0.3180880295674333 RPS(ph)LPSS(ph)PSPGLPK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSLPSSPSPGLPK 14 1 O43294-2;O43294;H3BQC4;H3BSN4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 2 RPS(0.999)LPS(0.374)S(0.619)PS(0.008)PGLPK 144.73 5.0362999999999995e-06 502490000.0 800270.0 657520.0 632420.0 728120.0 825450.0 892300.0 897910.0 1071900.0 1122200.0 891240.0 True False 755877.4278013059 625931.7522423582 673186.8051077774 797320.3058827393 890408.2188319585 886730.8247181212 988679.5055571169 1068181.8290833405 918436.7683598837 883344.3069742275 0.855699665275999 0.7085931808248133 0.7620888025119952 0.9026155481930354 1.0079967820044342 1.003833746045745 1.1192459132313881 1.2092474255505739 1.0397268212503237 1.0 19.75261635075315 -5.740681879182075 1.2849751924754085 1.0981404362087803 0.7617906450282512 0.791825599192262 0.06708788356117536 0.18306124274915625 0.6342265527835671 0.026854115094895888 0.03920264717517692 1.8168460156380903e-06 5.740681879182075 -0.3363497911805291 RPS(ph)LPV ddPTM_KYSE-520_SHP099_60min_R1 1 RPSLPV 6 1 Q15053 Q15053 KIAA0040 Uncharacterized protein KIAA0040 1 RPS(1)LPV 67.032 0.048839999999999995 616810000.0 295890.0 330900.0 309830.0 432700.0 451780.0 441540.0 378460.0 514510.0 597790.0 365650.0 True False 279476.39185790886 315003.067308974 329802.13754552783 473823.6779040014 487332.515723427 438784.1850790532 416718.4302136592 512725.2848975373 489246.40505957516 362410.6254713953 0.7711594865475809 0.8691882775215067 0.9100233667722823 1.3074221465987337 1.34469709625523 1.2107376391305227 1.1498515797422455 1.414763389540868 1.3499780930076257 1.0 18.46726572863489 -5.182243808529162 4.026995776657002 1.2693467898180173 0.8353915977493066 0.7227045028566057 0.11488422525565746 0.11551050309866212 3.537841959580601 0.03167321309143595 0.05700121970284921 6.5728873851174586e-06 5.182243808529162 -0.4339551920687107 RPS(ph)LQR ddPTM_KYSE-520_SHP099_60min_R1 2 RPSLQR 6 1 A0A087X2H1;Q9ULT8;H0YJP0;H0YJD4;Q8TC76 A0A087X2H1 HECTD1;FAM110B E3 ubiquitin-protein ligase HECTD1;Protein FAM110B 1 RPS(1)LQR;RPS(1)LQR 63.961000000000006 0.054112 5724300000.0 4051300.0 3857400.0 3872100.0 3200000.0 3299900.0 3364700.0 3586500.0 3625200.0 3695700.0 3685900.0 True False 3826566.312933674 3672084.7139245598 4121701.7615790484 3504127.037884919 3559583.356137356 3343699.659227911 3949058.420866901 3612625.02732804 3024654.0410155295 3653245.7935868055 1.0474428848042825 1.0051567623429076 1.128230071136907 0.9591818442756681 0.9743618571698975 0.9152681883868049 1.0809725498895772 0.9888809106876755 0.8279360907840487 1.0 21.80074739207952 -5.295686796474651 24.6197557428008 0.9666369776458872 1.054764613128675 0.30318547300512155 0.06677138033484176 672.5894099577506 483509.19230232073 0.018907950661559026 0.02804660308749912 5.0618958307479725e-06 5.295686796474651 0.08812763548278779 RPS(ph)NSTPPPTQLSK ddPTM_KYSE-520_SHP099_60min_R1 2 RPSNSTPPPTQLSK 14 1 E9PFR3;Q14738;Q14738-2 E9PFR3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform 1 RPS(0.333)NS(0.333)T(0.333)PPPTQLSK;RPS(0.333)NS(0.333)T(0.333)PPPTQLSK 84.94 0.0021008000000000003 959020000.0 2191000.0 1995750.0 1793970.0 1670120.0 1494050.0 1902800.0 1673410.0 1882100.0 2234800.0 2124640.0 True False 2069460.862349783 1899871.1743181786 1909612.1766534864 1828847.7026601105 1611623.2350183418 1890923.9193921774 1842574.6137077608 1875571.434385442 1829016.6547234622 2105817.342544907 0.982735216649329 0.9022013143942296 0.9068270728294487 0.8684740436461241 0.7653195756620917 0.8979524867560318 0.8749926104611648 0.8906619755153077 0.8685542747563626 1.0 21.005948872528705 -3.9666967357476444 0.003223841064877494 1.7614676570068022 1.0821957372207763e-06 0.022167829541126394 0.06059996578392358 532870.3473367132 245.93074324996675 65479.10472337219 68927.36836423798 0.00010797004049356851 3.9666967357476444 -1.761466574811065 RPS(ph)PAEK ddPTM_KYSE-520_SHP099_60min_R1 7 RPSPAEK 7 1 B5MBZ0;Q9HC35;Q9HC35-2 B5MBZ0 EML4 Echinoderm microtubule-associated protein-like 4 1 RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK;RPS(1)PAEK 85.821 0.005505899999999999 15647670000.0 9873900.0 7802570.0 7105490.0 7017710.0 8015580.0 8304850.0 7941790.0 7734130.0 9047640.0 8910650.0 True False 9326175.083868334 7427722.825303659 7563521.254585964 7684671.048448554 8646360.543588435 8253016.350622311 8744623.637601161 7707302.108189514 7404816.648443793 8831708.57338079 1.055987638901253 0.8410289768495289 0.8564052121673028 0.8701228063175155 0.9790133439920103 0.9344756206627236 0.9901395143356397 0.8726852844102789 0.838435347692776 1.0 23.074261136517812 -4.244015729698926 24.202433800530862 0.907805005109665 1.055987827696683 0.35243788961217803 0.05968861717393006 2800.5384601097053 3890012.84584029 0.015435890608478041 0.4352143541001008 5.701436218918938e-05 4.244015729698926 0.14818282258701798 RPS(ph)PDEPMTNLELK ddPTM_KYSE-520_SHP099_60min_R1 3 RPSPDEPMTNLELK 14 1 Q9UHD1;E9PPQ5;Q9UHD1-2 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 RPS(1)PDEPMTNLELK;RPS(1)PDEPMTNLELK;RPS(0.997)PDEPMT(0.003)NLELK 229.6 8.2319e-15 955720000.0 899310.0 749330.0 632090.0 670470.0 727900.0 816880.0 728070.0 763420.0 833460.0 848500.0 True False 849423.4815699604 713331.06203274 672835.5327797579 734191.2672158439 785181.5888155353 811781.5489137488 801670.4208784504 760771.8742035676 682124.6738168151 840982.9501230116 1.0100365072154127 0.8482110867151351 0.8000584704854496 0.8730156385553985 0.9336474523064776 0.9652770591782016 0.9532540710381692 0.9046222329385971 0.811104046422154 1.0 19.681717026377015 -5.7573787452814145 24.299331716639674 0.9263433997004272 0.8744453197358804 0.09069279882365588 0.06788168335379229 172.01868628377784 1029368.0801573833 0.02092389223726065 0.026016395886247237 1.7483213243847701e-06 5.7573787452814145 -0.05189807996454687 RPS(ph)PGEMR ddPTM_KYSE-520_SHP099_60min_R1 2 RPSPGEMR 8 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-2;Q6NYC8-3 A0A0G2JHC2 PPP1R18 Phostensin 1 RPS(1)PGEMR;RPS(1)PGEMR 118.61 0.00063273 716700000.0 580680.0 545330.0 456660.0 465970.0 507890.0 576270.0 472810.0 496950.0 566920.0 601250.0 True False 548468.5228431182 519131.5282429819 486097.03428183356 510255.6487010111 547858.0535011982 572673.2851734976 520606.24898092233 495226.19643900206 463981.61889020324 595923.3927654214 0.920367499416182 0.8711380263726821 0.8157038978216118 0.8562436965817644 0.9193430903237866 0.9609847375112593 0.8736127081117172 0.831023253074313 0.778592726050015 1.0 19.184767355491754 -4.258753045299163 21.984230418305913 0.8742761803020228 0.9203675641994259 0.03403616999395542 0.06336259909766981 181.60535390255572 1485685.4652795554 0.016072772992104023 0.10491394702372457 5.51120993573551e-05 4.258753045299163 0.04609138389740308 RPS(ph)PLAPRPPPSR ddPTM_KYSE-520_SHP099_60min_R1 1 RPSPLAPRPPPSR 13 2 A0A669KBI7;Q9UMN6 A0A669KBI7 KMT2B Histone-lysine N-methyltransferase 2B 1 RPS(1)PLAPRPPPSR 52.611999999999995 0.05520599999999999 729320000.0 159460.0 167510.0 123010.0 113270.0 173580.0 150840.0 135590.0 170910.0 208180.0 103970.0 True False 150614.4359243707 159462.5681623639 130939.421422959 124035.14674413262 187239.75846489973 149898.55160874312 149296.76043087777 170317.1531006938 170379.75979073308 103048.90668743609 1.4615820853025496 1.5474455119260946 1.2706531843187752 1.2036532043988704 1.8169989812005287 1.4546350507474042 1.4487951908477676 1.6527798166485466 1.6533873601155449 1.0 16.652969672909503 -3.9732126656736177 15.433208953180511 1.4706346875711134 1.4381728004259444 0.0 0.22933494921397748 59534742.114865415 952731178.7657211 0.0558198638875073 48174797.63928915 0.00010636220553725067 3.9732126656736177 -0.032461887145168955 RPS(ph)PPEPWDEEDGASCSTFFGSEER ddPTM_KYSE-520_SHP099_60min_R1 5 RPSPPEPWDEEDGASCSTFFGSEER 25 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 RPS(1)PPEPWDEEDGASCSTFFGSEER;RPS(1)PPEPWDEEDGASCSTFFGSEER;RPS(1)PPEPWDEEDGASCSTFFGSEER;RPS(1)PPEPWDEEDGASCSTFFGSEER;RPS(1)PPEPWDEEDGASCSTFFGSEER 161.15 2.7119e-10 1425090000.0 231541.0 257785.0 203440.0 189903.0 231171.0 192152.0 220478.0 207973.0 268808.0 232993.0 True False 218696.95916445987 245400.62165682623 216554.06791550896 207951.3240235812 249362.84251693345 190952.7080928346 242766.06789792044 207251.59020426316 219999.24329823907 230928.86328581118 0.947031722465059 1.0626676031965046 0.9377522793566471 0.9004994917686334 1.079825358202657 0.8268897416106027 1.0512590953061542 0.8974694079178677 0.9526710527559954 1.0 17.817088978068078 -4.801584980342633 24.999989514501504 0.9533943559377596 1.0048502158981052 0.06298026964902004 0.07522919644464733 353.68347633139103 220249.1819935251 0.01824245879745062 0.03797549995517985 1.5791195841176092e-05 4.801584980342633 0.05145585996034563 RPS(ph)PPPQPS(ph)SVK ddPTM_KYSE-520_SHP099_60min_R1 4 RPSPPPQPSSVK 12 1 H0YAU4;H3BLZ3;Q8IX03-2 H0YAU4 WWC1 Protein KIBRA 2 RPS(0.972)PPPQPS(0.987)S(0.041)VK;RPS(0.997)PPPQPS(0.997)S(0.006)VK;RPS(0.995)PPPQPS(0.998)S(0.007)VK;RPS(0.73)PPPQPS(0.895)S(0.375)VK 64.827 0.034925 2130750000.0 2388450.0 2584490.0 1998860.0 2058880.0 1776840.0 2595100.0 1940060.0 2408950.0 2782000.0 2675020.0 True False 2255957.9172429685 2460327.2210014234 2127709.7138890796 2254555.3361751563 1916667.1991633405 2578903.0182965295 2136180.1979609746 2400593.9147031545 2276858.9285129197 2651321.4039340704 0.8508805887869891 0.9279626443443458 0.8025091604254211 0.8503515767005136 0.7229101671036039 0.9726859272775887 0.805703976436534 0.9054330082882888 0.8587638319271599 1.0 21.33828013947488 -9.007422870293995 0.5637597479485128 1.0110874526840348 0.8470507476947526 0.3085808817396405 0.06613615079072546 5.310475777289801 2.0102405982761984 0.19912448850155298 0.028372500564268124 9.830534455397192e-10 9.007422870293995 -0.16403670498928213 RPS(ph)PPPQPSSVK ddPTM_KYSE-520_SHP099_60min_R1 4 RPSPPPQPSSVK 12 1 H0YAU4;H3BLZ3;Q8IX03-2 H0YAU4 WWC1 Protein KIBRA 1 RPS(1)PPPQPSSVK;RPS(0.983)PPPQPS(0.014)S(0.003)VK;RPS(1)PPPQPSSVK;RPS(1)PPPQPSSVK 133.86 3.1024e-05 2338970000.0 2396620.0 2155500.0 1908210.0 1866680.0 1923920.0 2100560.0 2023400.0 2157350.0 2546030.0 2369350.0 True False 2263674.7110564746 2051946.54452854 2031216.2698439504 2044088.705962192 2075321.558392613 2087449.6258768316 2227945.018480997 2149866.656379278 2083735.1321932958 2348359.402326405 0.9639387858664064 0.8737787506017081 0.8649511943664686 0.8704326535100262 0.8837325139996429 0.8888969992450462 0.9487240395460255 0.9154759932612997 0.8873152593802469 1.0 21.163221790495605 -6.743906489537561 23.52139292000087 0.9308351454043442 0.8877312367996899 0.2630829653630292 0.03751194078250023 178.82138295602698 239898.8972092416 0.014154980306805787 0.01093234479373581 1.8034060008589355e-07 6.743906489537561 -0.043103908604654295 RPS(ph)PQPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RPSPQPSPR 9 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RPS(1)PQPS(1)PR;RPS(1)PQPS(1)PR 101.56 0.0034603000000000004 719510000.0 859500.0 888230.0 944330.0 806330.0 812680.0 872250.0 864750.0 857360.0 980020.0 899410.0 True False 811821.8216292277 845558.0975395894 1005203.0227814218 882963.3607680448 876633.2924833198 866805.9642052916 952167.3691467032 854386.0182693279 802073.0722937563 891441.9271303917 0.9106839121226145 0.9485285264307622 1.127614701741968 0.9904889302327972 0.9833879984815815 0.9723639171825754 1.0681204688361368 0.9584314942641872 0.8997479789577326 1.0 19.76578129116549 -7.504469749128559 24.332778134761213 0.9429458934686715 1.0018750526193585 0.10967301147291553 0.061501336126515954 1007.9533602309903 1332312.414437131 0.03512865751838623 0.01635671560463192 3.129898477693018e-08 7.504469749128559 0.05892915915068697 RPS(ph)PQPSPR ddPTM_KYSE-520_SHP099_60min_R1 13 RPSPQPSPR 9 1 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RPS(0.999)PQPS(0.001)PR;RPS(1)PQPSPR;RPS(0.77)PQPS(0.23)PR;RPS(1)PQPSPR;RPS(0.984)PQPS(0.016)PR;RPS(1)PQPSPR;RPS(0.997)PQPS(0.003)PR;RPS(1)PQPSPR;RPS(1)PQPSPR;RPS(1)PQPSPR;RPS(1)PQPSPR;RPS(1)PQPSPR;RPS(1)PQPSPR 120.84 0.00048864 19309860000.0 2352421.0 2008300.0 2149014.0 2091116.0 1958402.0 2072974.0 1904159.0 2010279.0 2334188.0 2054291.0 True False 2221927.517694997 1911818.2534802447 2287542.8809839734 2289855.035923047 2112517.0956168696 2060035.800335338 2096649.9745209788 2003305.8113516436 1910358.2992910543 2036091.5799542149 1.091270913140833 0.9389647657809357 1.1234970487110472 1.1246326336532164 1.0375354018527856 1.0117598936201395 1.0297424709001182 0.9838976945215262 0.9382477281960039 1.0 20.957371022179057 -6.855055456517117 1.222557376493358 0.9698530565679415 1.0616740409565777 0.33645546146386185 0.05249489120678444 0.597695734655309 1.7554941949546465 0.03812286621729101 0.020049481457991576 1.3961900654864293e-07 6.855055456517117 0.09182098438863617 RPS(ph)PTSGDSRPAAGR ddPTM_KYSE-520_SHP099_60min_R1 8 RPSPTSGDSRPAAGR 15 2 Q8N1G1 Q8N1G1 REXO1 RNA exonuclease 1 homolog 1 RPS(0.816)PT(0.151)S(0.033)GDSRPAAGR;RPS(0.88)PT(0.034)S(0.079)GDS(0.007)RPAAGR;RPS(0.906)PT(0.051)S(0.043)GDS(0.001)RPAAGR;RPS(0.927)PT(0.036)S(0.036)GDSRPAAGR;RPS(0.925)PT(0.059)S(0.015)GDSRPAAGR;RPS(0.887)PT(0.037)S(0.049)GDS(0.028)RPAAGR;RPS(0.918)PT(0.065)S(0.017)GDSRPAAGR;RPS(0.96)PT(0.034)S(0.005)GDS(0.001)RPAAGR 117.78 0.00010956 23928010000.0 1119334.0 1052220.0 975752.0 866679.0 937282.0 990116.0 914197.0 1009589.0 1215939.0 1076938.0 True False 1057242.3116829908 1001669.7717855796 1038650.5351783992 949047.9115834569 1011040.7609949186 983936.3187791188 1006612.954462919 1006086.971398844 995155.1289277753 1067397.1671650864 0.9904863383616934 0.9384227376637386 0.9730684764106732 0.889123506017957 0.9472020276015484 0.9218090032900946 0.9430537998675742 0.9425610282168194 0.9323194397928003 1.0 20.02566565690572 -10.016687454098033 4.883434582546256 1.0000009330580377 0.9408641073748768 0.3114435285034294 0.025819545252025986 2.5364455212259355e-07 5.1085890929758456e-08 0.024175730547043254 0.00586338343575563 9.623045647517294e-11 10.016687454098033 -0.05913682568316092 RPS(ph)QEQSASASSGQPQAPLNR ddPTM_KYSE-520_SHP099_60min_R1 16 RPSQEQSASASSGQPQAPLNR 21 1 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(0.996)QEQS(0.004)ASASSGQPQAPLNR;RPS(0.999)QEQS(0.001)ASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(0.998)QEQS(0.002)ASASSGQPQAPLNR;RPS(0.947)QEQS(0.018)AS(0.013)AS(0.022)SGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(0.999)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(0.998)QEQS(0.002)ASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR;RPS(1)QEQSASASSGQPQAPLNR 338.17 2.5005999999999994e-65 40823506000.0 9665037.0 9801694.0 8823441.0 7285162.0 7302072.0 9302765.0 7943956.0 9066651.0 11052779.0 8810452.0 True False 9128898.130836412 9330805.90759735 9392214.12486476 7977541.606116183 7876703.523293633 9244702.992949545 8747008.598019268 9035200.903853258 9045872.951484568 8732398.24970794 1.04540561135559 1.0685272980889786 1.0755595262938094 0.9135567776450183 0.9020091958766395 1.0586671299901766 1.0016731197883488 1.034675772392246 1.0358978934323242 1.0 23.05794649669559 -5.193469740144269 24.999973859296237 0.9931853177608574 1.063700596014655 0.3129427479689805 0.04806726966007797 243.77630792277932 89662.57981417632 0.014318457332547534 0.024800290597100188 6.405164085671813e-06 5.193469740144269 0.07051527825379766 RPS(ph)QGPPAR ddPTM_KYSE-520_SHP099_60min_R1 8 RPSQGPPAR 9 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 RPS(1)QGPPAR;RPS(1)QGPPAR;RPS(1)QGPPAR;RPS(1)QGPPAR;RPS(1)QGPPAR;RPS(1)QGPPAR;RPS(1)QGPPAR;RPS(1)QGPPAR 142.08 0.00025491 78443140000.0 2644412.0 2673649.0 2274195.0 2843465.0 2418056.0 2614819.0 2343451.0 2428132.0 2807775.0 3212815.0 True False 2497721.19485537 2545202.8888110323 2420793.2485406534 3113707.058681074 2608343.2503433637 2598498.9447031408 2580349.896957747 2419709.37682227 2297953.838247795 3184351.9586322443 0.7843734697995511 0.79928441386996 0.7602153530731076 0.9778149837489968 0.8191127376082228 0.8160212748025688 0.8103218270087423 0.7598749787261561 0.7216394004495726 1.0 21.60256837157228 -11.391204040260181 2.386164712727586 2.6433739243099295 0.808488851016037 0.44882205889599813 0.06461195420832729 3300436.9116888316 665756.0306372686 29583316.926390097 0.017289421879294727 4.062524187855977e-12 11.391204040260181 -1.8348850732938926 RPS(ph)QGPPARS(ph)PSQDFSFIEDTEILDSAMYR ddPTM_KYSE-520_SHP099_60min_R1 2 RPSQGPPARSPSQDFSFIEDTEILDSAMYR 30 2 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 RPS(0.716)QGPPARS(0.921)PS(0.357)QDFS(0.007)FIEDTEILDSAMYR;RPS(0.61)QGPPARS(0.61)PS(0.61)QDFS(0.167)FIEDT(0.004)EILDSAMYR 239.98 3.1576e-31 192604000.0 31210.9 40514.0 41423.0 33273.0 27872.0 22958.3 29087.4 26505.0 46649.0 31593.0 True False 29479.569159613377 38567.64662724619 44093.192859143375 36435.25591610779 30065.36783001317 22815.008733751023 32027.838257667325 26413.06034131351 38178.717525592816 31313.110598982053 0.9414449282011516 1.2316772715802937 1.408138380879247 1.163578297369545 0.960152704566839 0.7286088254193663 1.0228251887153141 0.8435144205115209 1.2192566243110308 1.0 14.934479210377361 -5.731439495012422 4.759744357499464 0.9447324254769558 1.2095864801871596 0.3173683107595189 0.15931275473971418 0.2127339401323227 11.459169198773376 0.04881707139764266 0.06136358394549764 1.855925355013589e-06 5.731439495012422 0.26485405471020385 RPS(ph)QNAISFFNVGHSK ddPTM_KYSE-520_SHP099_60min_R1 4 RPSQNAISFFNVGHSK 16 1 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 RPS(1)QNAISFFNVGHSK;RPS(1)QNAISFFNVGHSK;RPS(0.985)QNAIS(0.015)FFNVGHSK;RPS(0.997)QNAIS(0.003)FFNVGHSK 243.7 2.2448e-23 13779370000.0 5851540.0 5784620.0 5772780.0 5728170.0 4663150.0 5006640.0 5312530.0 4591320.0 5815430.0 4687810.0 True False 5526943.411444211 5506718.172308366 6144902.63557458 6272573.55456289 5030113.375305895 4975391.702641191 5849572.377696376 4575393.782542149 4759494.507060349 4646279.650460994 1.189541703736201 1.1851887072191192 1.3225425712300585 1.3500206673828896 1.0826109820589076 1.0708334575056289 1.2589798328466937 0.9847435209992553 1.0243667762417448 1.0 22.147644559069597 -6.876706886615418 0.6989818715632533 0.9883298207909549 1.2487253170774832 0.5068480956322297 0.08903949462650808 0.6316446592570721 0.6020820769473244 0.08354926503840801 0.050556957183197734 1.3282906432112602e-07 6.876706886615418 0.26039549628652836 RPS(ph)QPAVHR ddPTM_KYSE-520_SHP099_60min_R1 2 RPSQPAVHR 9 1 C9IYN7;Q0PNE2 C9IYN7 ELP6 Elongator complex protein 6 1 RPS(1)QPAVHR;RPS(1)QPAVHR 98.902 0.0015157999999999999 0.0 185088.0 153465.0 157198.0 152537.0 131633.0 134669.0 138680.0 131087.0 145697.0 134622.0 True False 174820.79967621938 146092.31104433877 167331.2346056929 167034.0706180787 141991.7682106817 133828.48081807085 152699.12778637154 130632.28979293589 119242.09752248273 133429.35381433132 1.3102124433539923 1.0949038338867183 1.2540811284939333 1.2518540024596745 1.0641718943514116 1.0029912983337603 1.144419300709905 0.9790371163358284 0.8936721501957482 1.0 17.025716561827235 -6.257516599371949 0.7072590364266036 0.960048069936313 1.2367706914114702 0.6348757956738975 0.07898987413311472 0.49613172715591264 0.5437841149650103 0.05976802679664257 0.0607163216744207 5.526922828312015e-07 6.257516599371949 0.27672262147515725 RPS(ph)RHDNSAIGR ddPTM_KYSE-520_SHP099_60min_R1 6 RPSRHDNSAIGR 12 2 Q9NZN5;E9PMR6;Q9NZN5-2 Q9NZN5;Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 RPS(0.976)RHDNS(0.024)AIGR;RPS(1)RHDNSAIGR;RPS(1)RHDNSAIGR;RPS(1)RHDNSAIGR;RPS(1)RHDNSAIGR;RPS(1)RHDNSAIGR 182.37 1.5327e-07 1152317000.0 133868.0 178617.0 176240.0 195277.0 128923.6 121590.8 106797.8 107472.6 154695.8 111718.9 True False 126442.07518075794 170035.97121041702 187600.71239397032 213836.06736782932 139069.15384505907 120831.9067153829 117593.96387008484 107099.80263489339 126606.94228377039 110729.15746198897 1.1419040664529836 1.535602501705902 1.694230469137 1.9311631395843938 1.2559397816496403 1.0912383827797298 1.0619963753490351 0.9672231333617665 1.1433929886735743 1.0 16.756675640431254 -5.972669865331738 7.981985184356147 1.064299187079407 1.5839829450684286 0.6337097208491174 0.18738139821799948 0.14068417716267775 33.79756861776946 0.062110581683562635 0.06988419662552307 1.0649522480843348e-06 5.972669865331738 0.5196837579890217 RPS(ph)RPSNSNISK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSRPSNSNISK 12 2 Q6P158-2;Q6P158 Q6P158-2 DHX57 Putative ATP-dependent RNA helicase DHX57 1 RPS(0.802)RPS(0.139)NS(0.059)NISK 75.018 0.012961000000000002 1798700000.0 876040.0 774240.0 707220.0 592290.0 304690.0 593040.0 549200.0 523910.0 564850.0 511280.0 True False 827444.3148575557 737044.3482420676 752808.5327920091 648581.0635215179 328667.36955104454 589338.6173829812 604718.4956754788 522092.67849151295 462287.47870974976 506750.4569698205 1.6328437468125148 1.4544522616700122 1.4855606392415006 1.2798825429774485 0.6485783387672768 1.1629759959310293 1.1933259997267114 1.0302756935108321 0.9122586321363323 1.0 18.95091595910145 -5.52701411208066 24.984218274470066 1.0071491628644322 1.4948721621249137 0.7253061963326082 0.14760204712191224 65.72110068199855 397057.1659869069 0.04521978817189276 0.05862664864093243 2.9715694711987092e-06 5.52701411208066 0.48772299926048146 RPS(ph)SMYSTGGK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSSMYSTGGK 11 1 A0A1W2PPI7;O75382-4;O75382-3;O75382-2;O75382 A0A1W2PPI7 TRIM3 Tripartite motif-containing protein 3 1 RPS(0.892)S(0.108)MYSTGGK 77.185 0.015280000000000002 393120000.0 589070.0 606700.0 647030.0 621790.0 596410.0 550600.0 550930.0 621460.0 619790.0 657540.0 True False 556393.1128180675 577553.221324734 688738.5890846036 680884.7346520199 643344.073891294 547163.5011653008 606623.3809586507 619304.3003098541 507251.7596344441 651714.7071583791 0.8537372361045297 0.8862055972973119 1.0568099530662072 1.04475889092764 0.9871559853182031 0.8395751931869931 0.9308112496089944 0.9502690264734984 0.7783340686696705 1.0 19.313881026863957 -6.2374145980696385 24.575415722870087 0.8986280460629817 0.970765417522907 0.14002835065902275 0.08119729833270692 1290.4522075241214 1320028.9271862232 0.02798335415065094 0.027968364290066043 5.788758103137855e-07 6.2374145980696385 0.07213737145992527 RPS(ph)SNLNNNVR ddPTM_KYSE-520_SHP099_60min_R1 3 RPSSNLNNNVR 11 1 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 1 RPS(0.947)S(0.053)NLNNNVR;RPS(0.932)S(0.068)NLNNNVR;RPS(0.977)S(0.023)NLNNNVR 130.66 9.5465e-05 2035430000.0 980065.0 940720.0 937540.0 762370.0 787790.0 1010060.0 1028680.0 1027868.0 1043710.0 1237690.0 True False 925698.8407388586 895526.3991504933 997975.3285170373 834825.415585101 849784.5910880485 1003755.8408772676 1132669.0133493287 1024302.5658141945 854198.5737880011 1226725.0295082477 0.7546098909467427 0.7300139620608209 0.8135281375298029 0.6805318188704066 0.6927262187099078 0.818240287539938 0.9233275478233105 0.8349895381402648 0.6963244029759629 1.0 20.22638047437917 -6.439149340088114 5.576628131176624 0.8526900704799428 0.7361929984420696 0.3720890817084198 0.07929096492494139 0.2729107898266839 13.92775413761359 0.028335059120583612 0.024677782697819995 3.637899188098699e-07 6.439149340088114 -0.11649707203787318 RPS(ph)STSVPLGDK ddPTM_KYSE-520_SHP099_60min_R1 6 RPSSTSVPLGDK 12 1 I3L2T8;I3L533;I3L2R9;Q9NXR1;Q9NXR1-1 I3L2T8 NDE1 Nuclear distribution protein nudE homolog 1 1 RPS(0.428)S(0.428)T(0.139)S(0.005)VPLGDK;RPS(0.893)S(0.055)T(0.018)S(0.033)VPLGDK;RPS(0.874)S(0.097)T(0.029)SVPLGDK;RPS(0.583)S(0.322)T(0.094)S(0.001)VPLGDK;RPS(0.488)S(0.488)T(0.018)S(0.006)VPLGDK;RPS(0.943)S(0.043)T(0.014)SVPLGDK 181.87 3.4608000000000004e-07 7114310000.0 9684780.0 7764890.0 7122230.0 5723300.0 5137390.0 6693200.0 6941840.0 6345680.0 7512740.0 8360100.0 True False 9147545.947269723 7391853.029062487 7581340.34177092 6267240.711227116 5541673.365249408 6651425.256083526 7643588.933029612 6323668.317172847 6148615.796763538 8286036.018059377 1.1039712991028146 0.8920855536896024 0.9149538241503445 0.7563617509708737 0.6687966783117232 0.8027270508584292 0.9224662934569009 0.7631717148453665 0.7420455068458137 1.0 22.982250660817098 -4.120949177515979 1.2111044399425162 0.8018266904323071 1.3079829705235708 0.45978595752806783 0.0932109980773404 1.7602748017840901 1.7780201459355696 0.02820103198876582 1.2094766502861538 7.569214671304528e-05 4.120949177515979 0.5061562800912637 RPS(ph)SVGELASLGQELQAITTATTPSLDSEGQEPALR ddPTM_KYSE-520_SHP099_60min_R1 1 RPSSVGELASLGQELQAITTATTPSLDSEGQEPALR 36 1 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 RPS(0.493)S(0.493)VGELAS(0.014)LGQELQAITTATTPSLDSEGQEPALR 152.23 2.7443e-07 12686000.0 11493.0 15902.0 11773.0 11778.0 9858.3 14450.0 9786.9 11429.0 16634.0 11163.0 True False 10855.460379272505 15138.044050611375 12531.906417466016 12897.377578815176 10634.09212394585 14359.812190044657 10776.255362939437 11389.355466548646 13613.684909016509 11064.104504682588 0.9811422492148569 1.368212316162108 1.1326634172844463 1.1656955674412426 0.9611344613967857 1.2978738752844614 0.9739835120301579 1.0293969531586045 1.2304371224309096 1.0 13.433599068019193 -5.558186366846705 24.99441186016246 1.086661886250128 1.176052357252652 0.0738868801679411 0.13465620241463908 434.9889447778526 307928.1960405834 0.03793547622601381 0.048974668114972995 2.765754534858607e-06 5.558186366846705 0.08939047100252395 RPS(ph)TIAEQTVAK ddPTM_KYSE-520_SHP099_60min_R1 4 RPSTIAEQTVAK 12 1 Q9H0K1 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 1 RPS(0.961)T(0.039)IAEQTVAK;RPS(0.646)T(0.354)IAEQTVAK;RPS(0.614)T(0.386)IAEQTVAK;RPS(0.588)T(0.412)IAEQTVAK 170.48 1.4059e-06 3354810000.0 3275870.0 2808180.0 2492670.0 2248720.0 2093480.0 2473920.0 2241980.0 2371690.0 2623110.0 2726110.0 True False 3094150.9608150558 2673270.817635884 2653351.4966130136 2462437.672697679 2258224.9657281847 2458479.347625968 2468621.218016218 2363463.160946605 2146819.347221972 2701958.7862814856 1.1451510572717938 0.9893825291520887 0.9820103511884551 0.9113527879107873 0.835773283143234 0.9098878043988965 0.913641329597631 0.8747221360098063 0.7945418553835484 1.0 21.36557423833241 -3.750771012526364 0.7649803681114077 0.8822403153959261 1.5377811930452516 0.6782076962931509 0.053336887235952056 2.9396453773906273 0.7627944147308813 0.019786849922559236 1.9706623917545192 0.0001775125192274014 3.750771012526364 0.6555408776493256 RPS(ph)TSQTVSTPAPVPVIESTEAIEAK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSTSQTVSTPAPVPVIESTEAIEAK 26 1 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 1 RPS(0.767)T(0.161)S(0.054)QT(0.018)VS(0.001)TPAPVPVIESTEAIEAK 215.15 1.085e-21 746490000.0 204820.0 247300.0 174790.0 142180.0 177700.0 310200.0 256680.0 353540.0 436990.0 377290.0 True False 193458.22630145279 235419.33679513223 186057.24307388806 155692.7444520244 191683.97902530644 308263.9267371528 282627.71935539274 352313.65225685603 357643.6316214451 373947.50412717846 0.5173406003952314 0.6295518333371917 0.49754909718720985 0.4163492007131401 0.5125959577473614 0.8243508068242464 0.7557951750876558 0.9421473558947332 0.956400638255929 1.0 18.512476228904994 -6.616889901576594 1.2751374653246537 0.9582330010930293 0.5107095634960845 0.8701750161753518 0.07450484148918773 0.16413075339455394 0.543615531160039 0.04701709049080559 0.030951498606090876 2.4160732579335164e-07 6.616889901576594 -0.4475234375969448 RPS(ph)VASSVSEEYFEVR ddPTM_KYSE-520_SHP099_60min_R1 5 RPSVASSVSEEYFEVR 16 1 A6ND36;A6ND36-2;K7EKG0 A6ND36 FAM83G Protein FAM83G 1 RPS(0.997)VAS(0.002)SVSEEYFEVR;RPS(0.998)VAS(0.001)SVSEEYFEVR;RPS(0.999)VAS(0.001)SVSEEYFEVR;RPS(0.995)VAS(0.003)S(0.001)VSEEYFEVR;RPS(1)VASSVSEEYFEVR 263.61 1.6157e-29 1332190000.0 658139.0 554137.0 502223.0 542893.0 506453.0 502294.0 543999.0 535506.0 664439.0 603670.0 True False 621630.7177024304 527515.4267434049 534597.0981652114 594489.3874932682 546307.9697766096 499158.99682950095 598991.7278386093 533648.4546740395 543793.6267441395 598321.9534481525 1.0389568928901047 0.8816581502706247 0.8934940379244112 0.9935944754612511 0.9130668975594421 0.8342648869105143 1.0011194213860894 0.8919085311822554 0.9088645730116299 1.0 19.190562473330935 -10.678649326559 2.673967744936208 1.0102446903187359 0.9258791173447196 0.11168196880497183 0.060031791212659835 25323485.78341645 22229294.907685664 1766034.6387902182 0.015428991753487624 2.0958040411886218e-11 10.678649326559 -0.08436557297401626 RPS(ph)VDSLVSK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSVDSLVSK 10 1 C9K0J5;Q70E73 C9K0J5 RAPH1 Ras-associated and pleckstrin homology domains-containing protein 1 1 RPS(0.988)VDS(0.012)LVSK 98.943 0.0015039 249130000.0 295880.0 251810.0 258860.0 226800.0 230880.0 256200.0 237460.0 263730.0 273780.0 262160.0 True False 279466.9465778433 239712.66962548436 275546.5297906443 248355.0038100935 249048.94247249697 254600.96076743546 261464.7741862693 262815.18218504457 224068.45343215927 259837.4663573937 1.0755452263895238 0.9225485184487264 1.0604572683588422 0.955809057453221 0.9584797218194174 0.9798469956493661 1.0062627913198525 1.0114599171143208 0.862340818563725 1.0 17.987249944602386 -4.239081974298893 23.62113626502731 0.976372846983566 1.0755454523588213 0.2616577650434311 0.0513891141952075 3855.8309447042134 4073645.717627919 0.012141943646792098 0.549972678149445 5.766576073818857e-05 4.239081974298893 0.0991726053752553 RPS(ph)VGSQSNQAGQGK ddPTM_KYSE-520_SHP099_60min_R1 5 RPSVGSQSNQAGQGK 15 1 H0Y3N9;Q9UPP1-4;Q9UPP1-3;Q9UPP1-2;Q9UPP1 H0Y3N9 PHF8 Histone lysine demethylase PHF8 1 RPS(1)VGSQSNQAGQGK;RPS(1)VGSQSNQAGQGK;RPS(1)VGSQSNQAGQGK;RPS(0.996)VGS(0.004)QSNQAGQGK;RPS(0.942)VGS(0.058)QSNQAGQGK 304.36 4.4324e-34 4041420000.0 2282080.0 2107560.0 2205580.0 2022910.0 2221870.0 2567200.0 2907430.0 3471890.0 3717360.0 3219540.0 True False 2155488.473186305 2006309.654087946 2347755.215852775 2215166.758189933 2396718.5282890103 2551177.1525455113 3201341.398182363 3459846.823935216 3042381.131019697 3191017.3803642206 0.6754862842333622 0.6287366739002052 0.7357387741914474 0.6941882459872705 0.7510828812895561 0.7994870752644794 1.0032353373822627 1.084245684534727 0.9534204200017368 1.0 21.605585035821996 -6.589444489190397 1.8999228427943522 1.025185222782453 0.6905379508157852 0.9195373169919572 0.0437230175477327 0.08715938035008963 0.6388701121992308 0.020981533559221163 0.015163118831007719 2.573685707696409e-07 6.589444489190397 -0.33464727196666777 RPS(ph)VNGEPGSVPPPR ddPTM_KYSE-520_SHP099_60min_R1 5 RPSVNGEPGSVPPPR 15 1 Q8N3D4 Q8N3D4 EHBP1L1 EH domain-binding protein 1-like protein 1 1 RPS(1)VNGEPGSVPPPR;RPS(0.762)VNGEPGS(0.238)VPPPR;RPS(0.999)VNGEPGS(0.001)VPPPR;RPS(1)VNGEPGSVPPPR;RPS(1)VNGEPGSVPPPR 185.63 6.214500000000001e-11 4350210000.0 1671530.0 1481350.0 1286880.0 1235150.0 1368150.0 1403250.0 1298350.0 1441170.0 1638390.0 1584830.0 True False 1578806.8987875564 1410183.722448319 1369834.3438807998 1352538.2846386125 1475815.6212913485 1394491.7962408434 1429599.8886749034 1436170.9176416064 1340899.6764508565 1570789.6391790842 1.0051039677169389 0.8977546625436745 0.8720673409818859 0.8610562808050269 0.9395374049338838 0.8877648295220635 0.9101154304926734 0.9142986952677945 0.853646881164577 1.0 20.58305855655479 -10.304262405001205 5.371640516474346 1.0000177381860438 0.9031362095538977 0.32026744055230016 0.04164878189900026 8.685747579246402e-06 1.1249990390314275e-06 0.03958901405487451 0.009599988770756726 4.962923661083205e-11 10.304262405001205 -0.09688152863214605 RPS(ph)VSK ddPTM_KYSE-520_SHP099_60min_R1 5 RPSVSK 6 1 A0A499FIX8;H7BXI1;A0A087WXU3;A0FGR8-5;A0FGR8-2;A0FGR8;A0FGR8-6;A0FGR8-4 A0A499FIX8 ESYT2 Extended synaptotagmin-2 1 RPS(0.999)VS(0.001)K;RPS(0.945)VS(0.055)K;RPS(0.989)VS(0.011)K;RPS(1)VSK;RPS(1)VSK 113.74 0.005676 10999050000.0 9508550.0 8765240.0 7158680.0 9318750.0 9080330.0 10024950.0 10302600.0 9939120.0 11101200.0 9062070.0 True False 8981091.77667551 8344144.713506528 7620139.967092988 10204401.198215645 9794900.310989644 9962380.56848361 11344087.35168641 9904643.512528058 9085501.918478662 8981787.109983783 0.9999225840804553 0.9290071798998133 0.848399085146736 1.1361214726268511 1.0905291108605812 1.109175762739894 1.2630100460827882 1.1027475257700625 1.011547235224446 1.0 23.09857109649504 -5.271865847985298 24.953459934667602 1.1127023357106722 0.926099371732767 0.5250193123084883 0.07627180839275849 503.0351019188547 1203902.8685503055 0.021943022461165224 0.03294518538424665 5.347295099246835e-06 5.271865847985298 -0.1866029639779052 RPS(ph)VYLPTR ddPTM_KYSE-520_SHP099_60min_R1 2 RPSVYLPTR 9 1 Q9BW61 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 1 RPS(1)VYLPTR;RPS(1)VYLPTR 151.52 0.00016665 412590000.0 318700.0 294010.0 301260.0 287620.0 319980.0 257530.0 328150.0 361410.0 381660.0 362160.0 True False 301021.0756873009 279885.3182819929 320679.70163304266 314955.3183238936 345160.6055628449 255922.65974409715 361322.60443537525 360156.3530637281 312360.16486565094 358951.5441562161 0.838612009303117 0.7797300856858455 0.8933788051723286 0.8774312952581274 0.9615799435386483 0.7129727226712231 1.0066055163092633 1.0033564667073493 0.8702014797008687 1.0 18.453429578307464 -1.4561435400066438 0.10861372736670269 1.0585494825349455 0.35292578549039866 0.27202487956079735 0.0810230404494471 132.46271556655702 1.1153256738300872 0.8190718010478752 13.866675428454778 0.034982952468523655 1.4561435400066438 -0.7056236970445469 RPS(ph)YTLGMK ddPTM_KYSE-520_SHP099_60min_R1 2 RPSYTLGMK 9 1 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 RPS(0.996)YT(0.004)LGMK;RPS(0.994)YT(0.006)LGMK 102.87 0.0016690000000000001 1464100000.0 2078130.0 1670260.0 1598030.0 1396310.0 1466660.0 1452090.0 1498920.0 1439470.0 1757690.0 1728850.0 True False 1962851.9862505486 1590018.202488628 1701041.5707384052 1529014.8825840894 1582077.7978461222 1443026.9676845637 1650445.4616494663 1434476.8145448247 1438537.8037591202 1713533.7340249482 1.1454994712242825 0.927917653978021 0.9927097068248549 0.8923167675214427 0.9232837185702514 0.8421351380664175 0.9631823575324118 0.8371453599430213 0.8395153099087898 1.0 20.708543163534014 -1.0000000000000606 0.8010441840528854 0.8943084610834532 61.55934640856673 0.5972116027140832 0.05745896555121766 331.27716903978757 1.1413969798154313 0.01939170902686027 36473.50148696563 0.09999999999998604 1.0000000000000606 60.66503794748328 RPSASS(ph)PNNNTAAK ddPTM_KYSE-520_SHP099_60min_R1 3 RPSASSPNNNTAAK 14 1 O75151;E7ET14;A0A087WW48 O75151 PHF2 Lysine-specific demethylase PHF2 1 RPS(0.152)AS(0.152)S(0.696)PNNNTAAK;RPS(0.224)AS(0.224)S(0.553)PNNNTAAK;RPS(0.173)AS(0.102)S(0.724)PNNNTAAK 141.3 3.6494e-06 6469800000.0 2083090.0 1588110.0 1610360.0 1203140.0 1293950.0 1247300.0 1089320.0 935190.0 1199810.0 1117980.0 True False 1967536.8451630366 1511814.81179829 1714166.3822671021 1317486.063862769 1395776.5034315984 1239515.1380375568 1199439.0963386963 931946.0441649859 981954.748748774 1108075.5669752772 1.7756341749632092 1.3643607501653547 1.5469760667553352 1.1889857543372437 1.2596401771060262 1.1186196817073328 1.0824524356338032 0.8410491774572076 0.8861803093711594 1.0 20.079624840948643 -5.012438681086949 0.41505643259161207 0.880721473336955 1.9558396053058205 0.8511119665962111 0.10705794520326334 1.0729688816135388 0.22819007674981842 0.09139351985566029 0.5406139458409889 9.717651473707737e-06 5.012438681086949 1.0751181319688654 RPSDENT(ph)IAPSEVQK ddPTM_KYSE-520_SHP099_60min_R1 2 RPSDENTIAPSEVQK 15 1 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 RPS(0.453)DENT(0.547)IAPSEVQK;RPS(0.107)DENT(0.891)IAPS(0.003)EVQK 205.18 8.0202e-12 1671320000.0 1583450.0 1315910.0 1164690.0 1280850.0 1396470.0 1475630.0 1541860.0 1393930.0 1420920.0 1405870.0 True False 1495612.871970683 1252691.7083788202 1239767.7809698898 1402581.598898407 1506364.2441725906 1466420.0458128445 1697726.2559034817 1389094.782175708 1162916.7464782808 1393415.085550309 1.0733433902647986 0.8990082864533421 0.8897332846660417 1.0065784513481695 1.081059233385344 1.0523928304060979 1.2183923322697412 0.9968994857172121 0.8345802758544155 1.0 20.410193656883852 -3.898367304374751 19.51882321630401 1.0045099722365356 7.704769239821915 0.042301428778882544 0.10351867217502274 1726.6506584674514 335108.72121386946 0.027047178489546467 5431.902973424787 0.00012636671494397554 3.898367304374751 6.70025926758538 RPSDS(ph)GPPAER ddPTM_KYSE-520_SHP099_60min_R1 1 RPSDSGPPAER 11 1 Q9BST9;Q9BST9-3;Q9BST9-2 Q9BST9 RTKN Rhotekin 1 RPS(0.104)DS(0.896)GPPAER 162.32 2.0808e-05 112000000.0 126980.0 118640.0 126730.0 106110.0 118860.0 118770.0 111900.0 121100.0 137180.0 129490.0 True False 119936.1662716457 112940.35631772953 134899.21857516925 116194.6624968651 128213.60577911045 118028.71237450547 123211.94403875816 120679.93236495256 112271.57002638462 128342.8193416956 0.9344984541155489 0.8799896784021934 1.051085049144963 0.9053460341050507 0.9989932154892036 0.919636275561859 0.9600221085273405 0.9402936057034743 0.8747787418279832 1.0 16.96964305519687 RPSES(ph)DKEDELDK ddPTM_KYSE-520_SHP099_60min_R1 2 RPSESDKEDELDK 13 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 RPS(0.214)ES(0.786)DKEDELDK;RPS(0.094)ES(0.906)DKEDELDK 209.23 3.0307e-11 4603600000.0 3841100.0 3251860.0 2843570.0 3815200.0 3613400.0 3906200.0 4378600.0 4207000.0 4170200.0 4292600.0 True False 3628026.5259569865 3095635.7644586274 3026871.072072866 4177795.4609182943 3897754.022566359 3881819.9568686797 4821231.619017933 4192406.8989211773 3412996.8021871247 4254570.903592268 0.8527361767302384 0.727602344538408 0.7114397998437829 0.9819545979104145 0.9161332860325263 0.9123881220527168 1.1331886877116597 0.9853888897189129 0.8021953046558524 1.0 22.02058220500134 -5.266804386618196 24.887893537572957 0.9642019082229811 0.7602937271010969 0.5260939641583602 0.0859328391784697 321.0525637766605 1489341.559014251 0.024825739867060635 0.03807523678087342 5.40997942452792e-06 5.266804386618196 -0.20390818112188425 RPSES(ph)DKEDELDKVK ddPTM_KYSE-520_SHP099_60min_R1 4 RPSESDKEDELDKVK 15 3 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 RPS(0.385)ES(0.615)DKEDELDKVK;RPS(0.308)ES(0.692)DKEDELDKVK;RPS(0.011)ES(0.989)DKEDELDKVK;RPS(0.103)ES(0.897)DKEDELDKVK 171.06 9.3069e-06 22427800000.0 4258210.0 3533810.0 3574780.0 3534830.0 4024810.0 3844460.0 3969460.0 4019330.0 4558010.0 3286880.0 True False 4021998.602768817 3364040.463243051 3805216.038650233 3870779.1804146087 4341539.6489636665 3820465.299109967 4370731.754996325 4005387.882348676 3730390.2820816543 3257760.8003539466 1.2345899067641302 1.0326235317453503 1.1680464809561237 1.1881716975641856 1.3326760050928141 1.172727383390114 1.3416367937515417 1.2294910915232027 1.14507801852007 1.0 21.63544924783096 -3.920720803418585 21.37988041478251 1.192097529689162 3.3398952884956805 0.011145877143383554 0.10442025509901207 5953.923728353666 1573979.194318627 0.025240784492968748 12170.595073349625 0.00012002706778498645 3.920720803418585 2.1477977588065187 RPSGRDT(ph)PISEGPK ddPTM_KYSE-520_SHP099_60min_R1 2 RPSGRDTPISEGPK 14 2 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 RPS(0.004)GRDT(0.949)PIS(0.046)EGPK;RPS(0.002)GRDT(0.982)PIS(0.016)EGPK 131.84 5.373e-05 1781610000.0 1138020.0 922650.0 826280.0 862730.0 1011060.0 898540.0 961990.0 920450.0 1161610.0 991130.0 True False 1074891.7620133734 878324.5090741146 879543.3308947432 944723.5998107663 1090624.669855522 892931.87856351 1059237.3373176495 917257.1737846461 950690.9058051378 982349.3592874712 1.0942051845924001 0.8941060537884312 0.8953467751357863 0.9616981890190308 1.1102207779181394 0.9089758853318554 1.0782694845812772 0.933738252193661 0.9677727142762161 1.0 19.905876665246776 -5.543550076375107 24.982009190814907 0.999537893773522 0.9501770149498918 0.05138258291652187 0.07673597340510115 620.3450101074448 749704.4233303305 0.022078043437194744 0.02850569670869571 2.860552505275463e-06 5.543550076375107 -0.04936087882363016 RPSGRS(ph)PTSTEK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSGRSPTSTEK 12 2 A1L390-3;A1L390;A1L390-2;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RPS(0.253)GRS(0.656)PT(0.004)S(0.066)T(0.02)EK 70.197 0.017983000000000002 914890000.0 275340.0 278280.0 303090.0 176980.0 199300.0 185780.0 139330.0 127610.0 280240.0 187240.0 True False 260066.34132331793 264911.01109320455 322627.6663611462 193800.12598902258 214983.77613811797 184620.4781084081 153414.8361297602 127167.35069439796 229355.4802755072 185581.19927051553 1.4013614652000814 1.4274668562037505 1.7384717181984723 1.0442874965288191 1.1584351054049569 0.9948231762383052 0.8266722961851998 0.6852383279894121 1.2358767007491065 1.0 17.50169103677158 -5.376320408848511 5.558290602855835 0.9727060036427696 1.5106188338300865 0.6770944621783209 0.16782066563166062 0.13518831859660305 5.681288321614474 0.049771218811790315 0.07448910306827389 4.2041634394588525e-06 5.376320408848511 0.537912830187317 RPSGT(ph)GTGPEDGRPSLGSPYGQPPR ddPTM_KYSE-520_SHP099_60min_R1 1 RPSGTGTGPEDGRPSLGSPYGQPPR 25 2 P50479;P50479-2;C9J542 P50479 PDLIM4 PDZ and LIM domain protein 4 1 RPS(0.408)GT(0.47)GT(0.122)GPEDGRPS(0.001)LGSPYGQPPR 91.59200000000001 0.010265999999999999 3342200000.0 658090.0 530090.0 555310.0 443750.0 483260.0 449400.0 499680.0 510240.0 580890.0 615460.0 True False 621584.43583011 504623.6807186878 591106.1711274142 485923.86658169754 521289.81262672844 446595.1279035346 550192.5308068518 508470.0965309113 475415.01904524385 610007.5032206343 1.0189783446078178 0.8272417602315457 0.969014590814986 0.7965867042883622 0.8545629518891058 0.732114155228686 0.9019438742999396 0.8335472823635124 0.7793592972794803 1.0 19.218467462674017 -1.0000012040987665 0.9149864122823826 0.8405766850476787 92.86120632771897 0.25318373147756823 0.0801012405351996 1294.4121738335118 2.6402745937547607 0.024861885868934477 248916.64200200053 0.09999972274639733 1.0000012040987665 92.0206296426713 RPSGTGTGPEDGRPS(ph)LGSPYGQPPR ddPTM_KYSE-520_SHP099_60min_R1 3 RPSGTGTGPEDGRPSLGSPYGQPPR 25 2 P50479;P50479-2;C9J542 P50479 PDLIM4 PDZ and LIM domain protein 4 1 RPSGTGTGPEDGRPS(0.898)LGS(0.102)PYGQPPR;RPS(0.017)GT(0.004)GT(0.017)GPEDGRPS(0.656)LGS(0.307)PYGQPPR;RPS(0.047)GT(0.013)GT(0.013)GPEDGRPS(0.687)LGS(0.241)PYGQPPR 137.5 1.4105e-06 3607100000.0 634352.0 570814.0 536186.0 574097.0 526954.0 574628.0 639260.0 621740.0 635177.0 614493.0 True False 599163.2300106385 543391.2386307181 570749.4074879324 628659.0062714434 568422.281841876 571041.5335045657 703882.6393763768 619583.3290552073 519844.86830914865 609049.0700883197 0.9837684013272565 0.8921961551503881 0.9371156373412844 1.032197629298211 0.9332947208333274 0.9375952801664365 1.1557076004964675 1.0172962401294858 0.8535352795691235 1.0 19.21619894283304 RPSGTGTGPEDGRPSLGS(ph)PYGQPPR ddPTM_KYSE-520_SHP099_60min_R1 1 RPSGTGTGPEDGRPSLGSPYGQPPR 25 2 P50479;P50479-2;C9J542 P50479 PDLIM4 PDZ and LIM domain protein 4 1 RPS(0.001)GTGT(0.001)GPEDGRPS(0.158)LGS(0.84)PYGQPPR 109.77 0.00030415 1227700000.0 141890.0 95666.0 94133.0 117230.0 147150.0 123950.0 108640.0 127080.0 141750.0 90109.0 True False 134019.0788492975 91070.06176240652 100200.9637981252 128371.50395351535 158729.8678310288 123176.382073082 119622.39142422422 126639.18914069493 116011.77322670963 89310.70436374129 1.5005936836358342 1.0196992892531649 1.121936776917921 1.4373585436152054 1.7772770796270931 1.3791894594338194 1.3393959019406076 1.4179620465753309 1.2989682933662827 1.0 16.44654547994609 -3.296607950525221 14.111663066400656 1.3436100644574234 1.308658588445416 0.0 0.22414941103296937 0.0 0.0 0.05323609835559857 0.0 0.0005051170747724607 3.296607950525221 -0.03495147601200732 RPSILPEGSS(ph)DSR ddPTM_KYSE-520_SHP099_60min_R1 1 RPSILPEGSSDSR 13 1 A0A2R8YFR7;A0A2R8YF49;H0Y895;Q12774 A0A2R8YFR7;Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 RPS(0.111)ILPEGS(0.109)S(0.73)DS(0.05)R 121.82 9.617799999999999e-05 576650000.0 606340.0 509580.0 424740.0 443160.0 324460.0 400520.0 437500.0 442130.0 446780.0 465190.0 True False 572705.1114911762 485099.01190482586 452119.4200080278 485277.79315908795 349993.1560751316 398020.20611464966 481726.7695885322 440596.3542239176 365656.0144072618 461068.7785123436 1.2421251192480036 1.052118543940487 0.9805899706911597 1.052506297921225 0.7590909911627463 0.8632556023395845 1.0448045758874467 0.955597895059212 0.7930617544459748 1.0 18.814622450725725 -3.793590439222644 0.8436362473475618 0.9145035567354096 1.7222053202613854 0.538170833944395 0.09153317296855076 3.797340035945867 1.2162191771867592 0.033552827498926546 3.4248211079902404 0.0001608457391400068 3.793590439222644 0.8077017635259758 RPSLHS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 RPSLHSPR 8 1 H0Y2M6 H0Y2M6 CLCN7 1 RPS(0.387)LHS(0.613)PR 72.365 0.021772 0.0 347500.0 344880.0 295250.0 307280.0 313330.0 297210.0 289140.0 276820.0 420410.0 329400.0 True False 328223.4822759239 328311.4471245659 314282.2874167031 336483.7988128993 337987.28839616943 295355.00214554806 318369.09293446434 275859.77603027364 344074.14167365804 326481.77226932184 1.005334784831924 1.0056042174805848 0.9626334886391296 1.0306357885588986 1.035240914207475 0.9046600062618606 0.9751512028421446 0.8449469448564221 1.0538846909646884 1.0 18.316642921673342 -6.253154290752893 24.987408056961264 0.9472516670910933 1.0065122814945375 0.17396596457156488 0.05526890469642302 963.9511678597272 2907230.2728371024 0.017393764991073223 0.017119120981244507 5.582718236175018e-07 6.253154290752893 0.05926061440344421 RPSPPPQPS(ph)SVK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSPPPQPSSVK 12 1 H0YAU4;H3BLZ3;Q8IX03-2 H0YAU4 WWC1 Protein KIBRA 1 RPS(0.014)PPPQPS(0.493)S(0.493)VK 140.61 3.7135e-05 669130000.0 579820.0 462580.0 423070.0 398810.0 403690.0 487590.0 442690.0 460630.0 502610.0 463410.0 True False 547656.2287574866 440356.96245326486 450341.76913593407 436712.7824934011 435458.1063180977 484546.76994767284 487441.42543805024 459032.1820418503 411348.6937670302 459304.5479275244 1.1923596908165244 0.9587472286966133 0.9804861962895158 0.9508131031228365 0.9480814163129306 1.0549574832952264 1.0612597407046918 0.9994070037257347 0.8955902910674828 1.0 18.809091543299395 -4.256856357021594 24.87956589422292 0.9857197587705657 1.1923597800317112 0.6368794480480631 0.04733367506319981 312.30993468190536 1695354.2000024673 0.012596973092563093 0.0986869511655149 5.535331601347945e-05 4.256856357021594 0.20664002126114545 RPSQGPPARS(ph)PS(ph)QDFSFIEDTEILDSAMYR ddPTM_KYSE-520_SHP099_60min_R1 2 RPSQGPPARSPSQDFSFIEDTEILDSAMYR 30 2 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 RPS(0.515)QGPPARS(0.762)PS(0.61)QDFS(0.113)FIEDTEILDSAMYR;RPS(0.553)QGPPARS(0.654)PS(0.654)QDFS(0.14)FIEDTEILDSAMYR 191.82 1.3103e-15 141277000.0 25778.8 32652.0 33833.0 26789.2 23443.3 20982.0 18469.1 26842.3 43929.0 22869.1 True False 24348.798575236244 31083.3489083488 36013.929314714 29335.23751353331 25288.154335869258 20851.043555122276 20336.13686904584 26749.1903263399 35952.60095997268 22666.49756589056 1.0742197158804665 1.3713344471500637 1.5888616761377894 1.2942113102501611 1.1156621909652187 0.9199058431726898 0.8971892022545407 1.1801201420105212 1.586155993243331 1.0 14.468273862172397 -5.699116104766418 4.380744625833853 1.1039643991303965 1.360014264744439 0.19420721634675764 0.21468153759351957 0.34259574151837346 13.064734046999229 0.06940404016875776 0.08888736809902643 1.9993272958118723e-06 5.699116104766418 0.25604986561404264 RPSRPS(ph)NSNISK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSRPSNSNISK 12 2 Q6P158-2;Q6P158 Q6P158-2 DHX57 Putative ATP-dependent RNA helicase DHX57 1 RPS(0.113)RPS(0.869)NS(0.017)NISK 68.57600000000001 0.019671 1816300000.0 796970.0 630250.0 477620.0 507200.0 275130.0 545360.0 443220.0 513090.0 340670.0 381880.0 True False 752760.4853796923 599971.8439754633 508408.14941901935 555404.1355047591 296781.16572443774 541956.2059489796 488025.00301035173 511310.210546106 278812.915591839 378496.84029814415 1.9888157713198835 1.5851435998854364 1.3432295736433184 1.467394377895636 0.7841047378114477 1.431864544819126 1.2893766897127374 1.3508969061494516 0.7366320822446403 1.0 18.529921731040883 -1.0000000001756004 0.48265673744523707 1.1132609865618441 26.2691229193295 0.59065557219664 0.22883357776054158 71.95583987231915 0.8027986545868547 0.129735840772482 1818.2614249727317 0.0999999999595665 1.0000000001756004 25.155861932767657 RPSS(ph)MYSTGGK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSSMYSTGGK 11 1 A0A1W2PPI7;O75382-4;O75382-3;O75382-2;O75382 A0A1W2PPI7 TRIM3 Tripartite motif-containing protein 3 1 RPS(0.048)S(0.952)MYSTGGK 79.492 0.011901 449200000.0 416490.0 446420.0 430900.0 414350.0 425830.0 412470.0 405130.0 402400.0 510250.0 489530.0 True False 393386.46944776864 424973.31310991844 458676.5034643772 453729.69942113047 459340.39835872897 409895.62173202226 446084.4940877759 401004.16832086554 417601.46235575783 485193.14504857676 0.8107832385150112 0.8758848253459368 0.9453482765475907 0.9351527408238708 0.9467165870876856 0.8448091773658183 0.9193957058958749 0.8264835816687345 0.8606911837428128 1.0 18.888199642219462 RPSS(ph)NLNNNVR ddPTM_KYSE-520_SHP099_60min_R1 1 RPSSNLNNNVR 11 1 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 1 RPS(0.138)S(0.862)NLNNNVR 100.69 0.0016123 978970000.0 764950.0 611320.0 587240.0 482280.0 430110.0 597170.0 686110.0 734750.0 684160.0 745450.0 True False 722516.69860998 581951.2695899731 625094.4300172217 528115.7461972305 463957.2100088606 593442.8405210365 755468.6945883142 732201.32374194 559933.7902700925 738845.8929513247 0.977899052431465 0.7876490552926606 0.846041692835671 0.7147847084696767 0.6279485538663286 0.8032024623572384 1.0224983339497085 0.9910068266295113 0.7578492289284215 1.0 19.494913955642062 -6.656895612274739 7.254594910969478 0.9414873664496124 0.7825518187495569 0.3142176856683174 0.10816032203040124 0.28205124348252697 17.402739561195446 0.04312320072784801 0.033250036691139115 2.2034560256677422e-07 6.656895612274739 -0.15893554770005547 RPST(ph)EDTHEVDSK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSTEDTHEVDSK 13 1 H0YLN8;Q96QT4 H0YLN8 TRPM7 Transient receptor potential cation channel subfamily M member 7 1 RPS(0.359)T(0.613)EDT(0.028)HEVDSK 96.096 0.0034635999999999994 600010000.0 156930.0 206860.0 169240.0 234040.0 206410.0 216750.0 226380.0 253630.0 309280.0 191420.0 True False 148224.78006780072 196922.13509680962 180149.48119357412 256283.09123330793 222653.2926877518 215397.18285066975 249264.69965589003 252750.21672768675 253122.54831433328 189724.1677225066 0.7812646214086784 1.0379391168806227 0.9495336485389855 1.350819425431089 1.1735631541333618 1.1353175793909023 1.313826818418138 1.3321983159117767 1.3341608048825604 1.0 17.533543940390196 -4.502948570075143 0.8750815861447274 1.2518847793106858 0.6537069259397417 0.5646909452154512 0.12262409047402896 1.153788556614606 0.8922008672322694 0.04433323957240939 0.6183704014157093 3.1408806205222185e-05 4.502948570075143 -0.5981778533709441 RPST(ph)IAEQTVAK ddPTM_KYSE-520_SHP099_60min_R1 1 RPSTIAEQTVAK 12 1 Q9H0K1 Q9H0K1 SIK2 Serine/threonine-protein kinase SIK2 1 RPS(0.36)T(0.64)IAEQTVAK 142.39 5.716e-05 693370000.0 408180.0 324530.0 358420.0 299740.0 238160.0 293020.0 266730.0 305930.0 315750.0 356000.0 True False 385537.4417133428 308939.09167053906 381524.32669227617 328227.1994798827 256901.83705496317 291191.1534897499 293693.67143394065 304868.8002345985 258417.75940976088 352846.1169638091 1.0926503741371392 0.8755632464625548 1.081276818277721 0.9302276082963058 0.7280846371941602 0.8252638742220221 0.8323562519580294 0.8640276471169681 0.7323809076699188 1.0 18.42867960780075 -5.54227463442897 8.606176099782052 0.8237036717419107 1.0030608886279309 0.4637920287480163 0.08981692729119799 0.1666396890929284 62.56478339504125 0.02460886951523511 0.032225571482897446 2.8689657628489816e-06 5.54227463442897 0.17935721688602013 RPT(ph)SLSR ddPTM_KYSE-520_SHP099_60min_R1 2 RPTSLSR 7 1 K7ES98;K7EM85;Q92619;Q92619-2;K7EQA4 K7ES98 HMHA1 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 1 RPT(0.796)S(0.204)LSR;RPT(0.772)S(0.228)LSR 88.134 0.014116 382560000.0 133008.0 101075.0 108537.0 108012.0 113364.0 119537.0 96414.0 104439.0 116836.0 110313.0 True False 125629.78109512548 96219.20528333195 115533.46868534025 118277.42800500809 122285.10184707276 118790.92524300114 106160.46802996275 104076.72548524596 95621.52759587894 109335.71264221527 1.1490278707582957 0.8800345555728427 1.0566855594878337 1.081782202234811 1.1184369579885798 1.0864787211085059 0.9709587605410958 0.9519005544494089 0.8745681103189592 1.0 16.738405184105737 -6.908328925014286 4.362507483216166 0.9390878311353141 1.0567365623422498 0.36623831382754446 0.07296859108517771 0.2515607824045137 8.666918915973314 0.03278466703392747 0.021476820341586014 1.23501170864702e-07 6.908328925014286 0.11764873120693564 RPT(ph)SSPRPTSSELLR ddPTM_KYSE-520_SHP099_60min_R1 1 RPTSSPRPTSSELLR 15 2 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 RPT(0.608)S(0.235)S(0.156)PRPTS(0.001)S(0.001)ELLR 82.48200000000001 0.013805000000000001 3152000000.0 646760.0 765860.0 687100.0 511520.0 533900.0 514420.0 552040.0 403120.0 615370.0 575880.0 True False 610882.9335159049 729066.9360207039 731391.5653988704 560134.707005904 575914.8925245422 511209.31396559026 607845.5905912077 401721.6708089152 503634.32021531067 570778.1512278607 1.070263345227512 1.2773210299874507 1.281393767132637 0.9813527476497472 1.0089995408647499 0.8956357437051056 1.064941938095576 0.7038140299251638 0.8823643987281049 1.0 19.122570585496977 -5.405395848167063 3.4964565879274603 0.9202513615946546 1.2158124228758456 0.5825938988825294 0.10721063415285886 0.1724525204539512 3.8563244560057206 0.03223023806514102 0.049503628184036995 3.931915281875405e-06 5.405395848167063 0.295561061281191 RPTPNDDTLDEGVGLVHSNIAT(ph)EHIPSPAK ddPTM_KYSE-520_SHP099_60min_R1 1 RPTPNDDTLDEGVGLVHSNIATEHIPSPAK 30 1 Q01581 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic 1 RPTPNDDTLDEGVGLVHS(0.055)NIAT(0.945)EHIPSPAK 166.74 7.7305e-10 1081400000.0 471740.0 383580.0 396740.0 388310.0 335490.0 344080.0 303410.0 297430.0 456900.0 374340.0 True False 445571.64180962415 365152.2410346821 422314.4952064446 425214.8656503416 361891.15432301635 341932.4690900048 334081.643796243 296398.2847506838 373938.4775117014 371023.63883211336 1.2009252111595063 0.9841751382313189 1.1382414784561479 1.1460586904619023 0.975385707126792 0.9215921394289591 0.9004322335036273 0.798866308582572 1.0078562074609672 1.0 18.501151581874336 -5.923302679649509 3.7590184202431463 0.9139069951209037 1.1089167144825856 0.5899705030429188 0.07514286247503564 0.157162794739831 4.396587154541954 0.023782065151356592 0.027013456823569208 1.1931562495625136e-06 5.923302679649509 0.19500971936168188 RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 12 RPTPNDDTLDEGVGLVHSNIATEHIPSPAK 30 1 Q01581 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic 1 RPTPNDDTLDEGVGLVHS(0.005)NIAT(0.02)EHIPS(0.974)PAK;RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAK;RPTPNDDTLDEGVGLVHSNIAT(0.002)EHIPS(0.998)PAK;RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAK;RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAK;RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAK;RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAK;RPTPNDDTLDEGVGLVHS(0.049)NIAT(0.067)EHIPS(0.883)PAK;RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAK;RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAK;RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAK;RPTPNDDTLDEGVGLVHS(0.012)NIAT(0.064)EHIPS(0.924)PAK 235.6 4.1268e-31 60914870000.0 12788960.0 11403420.0 9826170.0 10256230.0 10170680.0 10041740.0 8961350.0 9566150.0 11901060.0 9377820.0 True False 12079530.894640286 10855582.58631762 10459580.640627872 11230979.01555202 10971054.652746776 9979065.775865687 9867250.712347856 9532967.258406185 9740127.505308406 9294739.81063355 1.2996093640857838 1.16792753831564 1.1253225860783858 1.2083155897170286 1.1803509163532966 1.0736250803329903 1.0615951509540194 1.0256303514273841 1.0479182530924982 1.0 23.147983049405717 -5.871248096670201 0.3588344593723499 0.9868361376923628 1.2877996055903678 0.7883637106285839 0.04116788286140595 1.0633473438853285 0.24288954345099212 0.048605069130435954 0.12548284324266848 1.3450917324616164e-06 5.871248096670201 0.300963467898005 RPTPNDDTLDEGVGLVHSNIATEHIPS(ph)PAKK ddPTM_KYSE-520_SHP099_60min_R1 5 RPTPNDDTLDEGVGLVHSNIATEHIPSPAKK 31 2 Q01581 Q01581 HMGCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic 1 RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAKK;RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAKK;RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAKK;RPTPNDDTLDEGVGLVHS(0.251)NIAT(0.024)EHIPS(0.725)PAKK;RPTPNDDTLDEGVGLVHSNIATEHIPS(1)PAKK 258.49 2.1569000000000002e-41 19589950000.0 3743640.0 3311205.0 3385620.0 3355980.0 3179530.0 2962040.0 2873364.0 2842566.0 3696740.0 2526247.0 True False 3535972.8264386826 3152129.741579966 3603862.4823835264 3674931.3301878246 3429740.921948971 2943552.8096470498 3163831.674450241 2832705.8020058903 3025505.203231796 2503866.4169704234 1.412205061129845 1.2589049160992842 1.439318990005886 1.4677026319296786 1.3697779157479248 1.1756029753410844 1.2635784612976073 1.131332639316018 1.2083333131216059 1.0 21.255726164855453 -7.206022989356693 0.5401077145736902 1.0228515821408537 1.4025371865036418 0.7208431082740449 0.07525425859217555 0.47627967563414686 0.30542754058121396 0.07908107134048498 0.05085011319556127 6.22267344606528e-08 7.206022989356693 0.3796856043627881 RPTPQDS(ph)PIFLPVDDTSFR ddPTM_KYSE-520_SHP099_60min_R1 4 RPTPQDSPIFLPVDDTSFR 19 1 P49327;A0A0U1RQF0 P49327 FASN Fatty acid synthase;[Acyl-carrier-protein] S-acetyltransferase;[Acyl-carrier-protein] S-malonyltransferase;3-oxoacyl-[acyl-carrier-protein] synthase;3-oxoacyl-[acyl-carrier-protein] reductase;3-hydroxyacyl-[acyl-carrier-protein] dehydratase;Enoyl-[acyl-carrier-protein] reductase;Oleoyl-[acyl-carrier-protein] hydrolase 1 RPT(0.002)PQDS(0.998)PIFLPVDDTSFR;RPTPQDS(1)PIFLPVDDTSFR;RPT(0.002)PQDS(0.998)PIFLPVDDTSFR;RPT(0.011)PQDS(0.989)PIFLPVDDTSFR 148.26 1.1114e-06 3495300000.0 880280.0 849127.0 752416.0 690394.0 745690.0 799982.0 689885.0 657845.0 871910.0 761148.0 True False 831449.1136053253 808333.6643543888 800917.9392681659 756008.8381854759 804371.5606042807 794989.0155997436 759625.3084287632 655563.0892371766 713593.1230624379 754404.8208841841 1.1021259283985527 1.071485284793115 1.0616553832854183 1.0021262023477155 1.0662333250489229 1.0537963088146676 1.0069200081972707 0.8689805142931587 0.945902124838076 1.0 19.524979369754544 -7.019249497108724 4.313240561670288 0.9303171939445897 1.0568253002503907 0.6695215943522531 0.037939435880906966 0.11600819334868799 5.138089813486085 0.01781029997621761 0.010622399000936074 9.566443324021666e-08 7.019249497108724 0.126508106305801 RPTPTFHS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 2 RPTPTFHSSR 10 1 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5;H0Y4F5;H0Y6T5;H0Y314 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 RPTPTFHS(0.609)S(0.391)R;RPTPTFHS(0.896)S(0.104)R 96.059 0.0017913 1900300000.0 512150.0 475200.0 442700.0 469420.0 540580.0 458670.0 377720.0 484960.0 563070.0 375540.0 True False 483740.0185542861 452370.678710258 471237.1503450448 514033.53566373006 583120.5705205406 455807.27039500285 415903.6237919547 483277.7869505144 460830.68183960044 372213.0077656989 1.299632222576142 1.2153542978675718 1.2660415958425606 1.3810198057003547 1.5666313598787607 1.224587160806387 1.1173806801877226 1.2983903755849626 1.238083227144186 1.0 18.50576894872466 -8.63851682053344 0.5165771674439879 0.9839158326308859 1.3195183895054066 0.41133476835313754 0.10942661916797793 2.641431401675726 1.155137292613 0.2263390561811372 0.061071036528806556 2.2987046770766867e-09 8.63851682053344 0.3356025568745207 RPTPTFHSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RPTPTFHSSR 10 1 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5;H0Y4F5;H0Y6T5;H0Y314 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 RPTPTFHS(0.249)S(0.751)R 103.2 0.0010792999999999998 920550000.0 386110.0 504040.0 290050.0 298170.0 366320.0 352530.0 305680.0 346410.0 400150.0 311100.0 True False 364691.7086087977 479825.1618205361 308747.0870964084 326507.9871519204 395147.29992431204 350329.7295056361 336581.11754930805 345208.3845627022 327492.8469606203 308343.8960321373 1.1827434020966887 1.5561364048228998 1.00130760189989 1.058908547740118 1.2815149091945301 1.1361656060450207 1.0915770407020728 1.119556407650511 1.0621025782410405 1.0 18.23418076148137 -1.0000000000423384 0.19257646908787837 1.011060870812819 2.446799643775845 0.2520621942426473 0.13632307202162108 74.43341694633743 0.8767931660952496 0.2721307507259665 31.89920022740818 0.09999999999025123 1.0000000000423384 1.435738772963026 RPTS(ph)LSR ddPTM_KYSE-520_SHP099_60min_R1 1 RPTSLSR 7 1 K7ES98;K7EM85;Q92619;Q92619-2;K7EQA4 K7ES98 HMHA1 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 1 RPT(0.447)S(0.552)LS(0.001)R 93.448 0.006079600000000001 0.0 29174.0 31328.0 29419.0 33459.0 28328.0 43918.0 34930.0 30950.0 39894.0 33936.0 True False 27555.660063072843 29822.955855713313 31315.395812064296 36638.93330018482 30557.25243572808 43643.89147144509 38461.06528394839 30842.6416737843 32650.25524590024 33635.35344180849 0.8192469304877696 0.8866550460755261 0.9310262152066313 1.0892982992901423 0.9084861405899677 1.2975600671761058 1.1434714176703604 0.9169709403275403 0.9707124172899644 1.0 15.037690797702819 -4.912601522870941 1.4996506055183214 1.0551188541155532 0.8230788001947414 0.3409531279655129 0.1099312297072807 0.5620253478637105 2.2933381516371747 0.035906568604613526 0.13580701963894773 1.2229212093966772e-05 4.912601522870941 -0.23204005392081173 RPTS(ph)SPRPTSSELLR ddPTM_KYSE-520_SHP099_60min_R1 2 RPTSSPRPTSSELLR 15 2 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 RPT(0.326)S(0.582)S(0.09)PRPT(0.002)SSELLR;RPT(0.287)S(0.356)S(0.356)PRPT(0.001)S(0.001)SELLR 128.94 4.256e-05 5897300000.0 886010.0 818850.0 865070.0 845410.0 866080.0 811560.0 733360.0 798090.0 1008060.0 824950.0 True False 836861.2590828538 779511.216881092 920833.7963609389 925757.5122182161 934235.5686788827 806494.7530071042 807495.185703876 795321.6120656072 825021.7151246342 817641.5848013874 1.0235062338299916 0.9533654248645419 1.126207146844932 1.1322289979210036 1.1425979133703394 0.9863670928662577 0.9875906518380225 0.9727020088622303 1.0090261190972074 1.0 19.64110904725476 -6.297030178159998 24.306779506341442 0.989209360488175 1.0747510441113513 0.382799570926703 0.05357935978492133 528.2693906376904 360780.36686424736 0.021275949147460966 0.01876453324800695 5.046262309879929e-07 6.297030178159998 0.08554168362317627 RPTSS(ph)PRPTSSELLR ddPTM_KYSE-520_SHP099_60min_R1 1 RPTSSPRPTSSELLR 15 2 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 RPT(0.003)S(0.068)S(0.928)PRPT(0.001)SSELLR 97.62100000000001 0.0011329 769620000.0 166710.0 186690.0 190070.0 162230.0 187370.0 205430.0 138240.0 155570.0 218440.0 156980.0 True False 157462.2639718542 177721.1321725972 202322.21632275256 177648.2904237719 202114.95301053295 204147.83516961077 152214.64829238554 155030.3639803111 178776.80242428533 155589.27932859186 1.0120380057761356 1.142245358674518 1.3003609065857586 1.1417771917857733 1.299028788376111 1.3120944839552036 0.9783106454971143 0.9964077515450124 1.1490303393379908 1.0 17.247383131211315 -6.772786404767349 24.999742405890988 1.0306378104172365 1.2048202996445334 0.4267181921732436 0.09665993052964636 225.81986973689584 497521.18258086924 0.041879160271023154 0.02851576551639738 1.6873827119312414e-07 6.772786404767349 0.17418248922729695 RPTWAEER ddPTM_KYSE-520_SHP099_60min_R1 2 RPTWAEER 8 1 Q8ND56-2;Q8ND56;Q8ND56-3;A0A140TA76;A0A0G2JQ95;A0A096LP11 Q8ND56-2 LSM14A Protein LSM14 homolog A 0 ; 123.86 0.0021920000000000004 1205230000.0 1578460.0 1334660.0 1072150.0 837640.0 1334710.0 1194020.0 1002380.0 987310.0 1006850.0 1116950.0 False True 1490899.6772180006 1270540.930234499 1141262.504500653 917249.0537543512 1439744.0835389236 1186567.6782807682 1103710.3526860615 983885.2520498855 824031.4206230167 1107054.6919739502 1.3467263072248308 1.147676749347444 1.0308998397050355 0.8285489961826878 1.3005175751269946 1.071823900737046 0.9969790658834339 0.8887413234259947 0.744345718957855 1.0 20.078295066864158 -7.024016438367263 2.230362114947595 0.8601265915568079 1.1137778019676907 0.3602140391155546 0.14594039364468137 0.3706834287807941 3.637408612089713 0.08622413014168664 0.04541672121550498 9.462013462673936e-08 7.024016438367263 0.2536512104108828 RPVS(ph)AIFTESIQPQKPGPGAAATVGK ddPTM_KYSE-520_SHP099_60min_R1 1 RPVSAIFTESIQPQKPGPGAAATVGK 26 2 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 RPVS(0.999)AIFT(0.001)ESIQPQKPGPGAAATVGK 194.93 1.611e-15 1869900000.0 521530.0 658840.0 538360.0 431290.0 447400.0 559170.0 484290.0 557860.0 616580.0 585310.0 True False 492599.69125572033 627188.3374609991 573063.5470064563 472279.6719279327 482607.8346422182 555680.0126164199 533246.7594149254 555924.9138655033 504624.6147169286 580124.60876429 0.8491273836926096 1.0811269302934046 0.987828370575635 0.814100392903388 0.8319037450767861 0.9578631973569628 0.919193482501599 0.9582853501934111 0.8698555570531956 1.0 19.146003293879883 RPVS(ph)FPETPYTVSPAGADR ddPTM_KYSE-520_SHP099_60min_R1 6 RPVSFPETPYTVSPAGADR 19 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 RPVS(1)FPETPYTVSPAGADR;RPVS(1)FPETPYTVSPAGADR;RPVS(1)FPETPYTVSPAGADR;RPVS(1)FPETPYTVSPAGADR;RPVS(1)FPETPYTVSPAGADR;RPVS(1)FPETPYTVSPAGADR 260.48 1.6685e-29 2531890000.0 536547.0 582984.0 511614.0 477626.0 443592.0 556487.0 499287.0 593376.0 547339.0 637483.0 True False 506783.66833007336 554976.5735631755 544593.4570513425 523019.4314365067 478500.16670677357 553013.7582146283 549759.8025315405 591317.7171509991 447956.03489336243 631835.396574269 0.8020817938940898 0.8783562563480738 0.8619229945078398 0.8277779850135832 0.7573177591840223 0.8752497267690262 0.8700997214025489 0.9358730459816724 0.7089758461177119 1.0 19.269189236199846 RPVS(ph)PGKDITAR ddPTM_KYSE-520_SHP099_60min_R1 3 RPVSPGKDITAR 12 2 P31629 P31629 HIVEP2 Transcription factor HIVEP2 1 RPVS(0.994)PGKDIT(0.006)AR;RPVS(0.996)PGKDIT(0.004)AR;RPVS(1)PGKDITAR 113.47 0.00010309999999999999 2614580000.0 2324920.0 2185430.0 2224170.0 1945590.0 2474920.0 2331570.0 2387230.0 2755740.0 3212340.0 2710420.0 True False 2195952.052986884 2080438.6624026932 2367543.5569978245 2130498.288637038 2669682.123631467 2317017.806778023 2628554.505519615 2746180.9811345506 2629060.032501505 2686407.78747485 0.8174306459448656 0.7744314441398521 0.8813046061124066 0.7930658549198325 0.9937739668856809 0.8624966833333805 0.9784644452621931 1.0222502309360433 0.9786526248022642 1.0 21.357246886864473 -5.964711403264015 0.6095389517613768 1.009345899526256 0.7858203444664907 0.6823974876560218 0.05066419447450517 0.48937391173671707 0.39630718694331374 0.0361489897410066 0.05532960735920169 1.0846474429298176e-06 5.964711403264015 -0.22352555505976535 RPWEEDFR ddPTM_KYSE-520_SHP099_60min_R1 1 RPWEEDFR 8 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 0 76.827 0.036487 256790000.0 327100.0 285050.0 235610.0 142690.0 281570.0 308730.0 255500.0 193060.0 185670.0 266390.0 False True 308955.1109423161 271355.7701312268 250797.79758932907 156251.2146986871 303727.95708585 306803.1015524215 281328.4334397029 192390.3199205427 151957.00835981092 264029.99184828403 1.1701515755067962 1.0277460080639336 0.9498837455308548 0.5917934307571832 1.1503539994061625 1.1620009507431854 1.0655169568817728 0.7286684310890459 0.5755293453447058 1.0 18.010342292782546 -7.267726995877611 23.825402689666134 0.7390741131363896 1.009004545679967 0.2687736282980201 0.18584905619225886 359.52398112912226 1362311.2434863548 0.1026191561936525 0.05130317464970794 5.398498737232272e-08 7.267726995877611 0.2699304325435774 RPWRPEEAVEDPDEEDEDNT(ph)SEAENGFSLEEVLR ddPTM_KYSE-520_SHP099_60min_R1 6 RPWRPEEAVEDPDEEDEDNTSEAENGFSLEEVLR 34 2 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 RPWRPEEAVEDPDEEDEDNT(0.545)S(0.444)EAENGFS(0.012)LEEVLR;RPWRPEEAVEDPDEEDEDNT(0.54)S(0.46)EAENGFSLEEVLR;RPWRPEEAVEDPDEEDEDNT(0.612)S(0.388)EAENGFSLEEVLR;RPWRPEEAVEDPDEEDEDNT(0.886)S(0.114)EAENGFSLEEVLR;RPWRPEEAVEDPDEEDEDNT(0.5)S(0.5)EAENGFSLEEVLR;RPWRPEEAVEDPDEEDEDNT(0.597)S(0.403)EAENGFSLEEVLR 255.35 2.9436e-32 9709070000.0 649298.0 643784.0 579287.0 632940.0 594495.0 602881.0 528942.0 629638.0 818895.0 555787.0 True False 613280.145596527 612855.6503005148 616628.7669119714 693094.4272996502 641278.3742861542 599118.1960516487 582412.6193364501 627453.9327366138 670204.3106630445 550863.159575743 1.1133076063188825 1.1125370060552178 1.1193864686592563 1.2581970953248154 1.164133711138073 1.0875989538183497 1.0572727713085868 1.1390377479950893 1.216643914214946 1.0 19.07133445653641 -6.254372059391756 24.236024430439464 1.1061231672964325 1.1551559039200625 0.13934255130841555 0.06544847722726621 881.3102312069047 3022284.165970323 0.02280256839824793 0.02228501684944347 5.567086131971052e-07 6.254372059391756 0.04903273662363006 RPWRPEEAVEDPDEEDEDNTS(ph)EAENGFSLEEVLR ddPTM_KYSE-520_SHP099_60min_R1 5 RPWRPEEAVEDPDEEDEDNTSEAENGFSLEEVLR 34 2 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 RPWRPEEAVEDPDEEDEDNT(0.257)S(0.737)EAENGFS(0.005)LEEVLR;RPWRPEEAVEDPDEEDEDNT(0.169)S(0.831)EAENGFSLEEVLR;RPWRPEEAVEDPDEEDEDNT(0.025)S(0.975)EAENGFSLEEVLR;RPWRPEEAVEDPDEEDEDNT(0.195)S(0.805)EAENGFSLEEVLR;RPWRPEEAVEDPDEEDEDNT(0.051)S(0.949)EAENGFSLEEVLR 261.07 1.2582e-41 6627130000.0 994312.0 959954.0 1000847.0 912460.0 881423.0 873531.0 882897.0 964091.0 1109173.0 739240.0 True False 939155.5312481701 913836.3689196694 1065363.1990318208 999179.9240588965 950785.9754891549 868078.969009128 972148.8450043567 960746.7933415303 907775.1431759389 732690.9087200166 1.281789524164889 1.247233121148053 1.4540417880890184 1.363712736390337 1.297663126665707 1.1847819574090652 1.326819854640566 1.3112579696395015 1.2389605662799719 1.0 19.48284518916436 -11.017613959661373 0.302871653424289 0.6665670675435253 1.3296195634103556 0.6576844353184426 0.06674201979216082 22.018704783950234 1.00563982011182 5.183950359522399 0.07493592909319644 9.602538129790694e-12 11.017613959661373 0.6630524958668302 RPYDLDR ddPTM_KYSE-520_SHP099_60min_R1 4 RPYDLDR 7 1 Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 0 ;;; 102.0 0.011613 2865950000.0 1712590.0 1424480.0 1088970.0 865640.0 1428990.0 1537440.0 1327750.0 1221060.0 1062230.0 1451610.0 False True 1617589.2187364763 1356045.842611928 1159166.7486136039 947910.165335844 1541443.3831591015 1527844.2666755896 1461971.927591253 1216824.4278575473 869355.8086392086 1438749.8647354892 1.124301908472371 0.9425167472465645 0.8056763562766444 0.6588429222963751 1.0713769091769765 1.0619248725048396 1.0161404448576843 0.8457512022642363 0.604243885575647 1.0 20.45638436204627 -7.516647718188063 24.606502852444812 0.7764138262171641 0.9444489370130899 0.1362292472582025 0.15743687398784792 448.9296442619264 1772883.694769936 0.10358414957789387 0.042112263116602 3.043352667162044e-08 7.516647718188063 0.1680351107959257 RQACTAQT(ph)PEPLRR ddPTM_KYSE-520_SHP099_60min_R1 1 RQACTAQTPEPLRR 14 2 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 RQACT(0.009)AQT(0.991)PEPLRR 84.829 0.0026508000000000005 482490000.0 170370.0 191550.0 206910.0 130620.0 155350.0 131980.0 119510.0 114900.0 199570.0 120290.0 True False 160919.236475825 182347.6504775883 220247.7496677054 143034.08552766513 167575.1611794111 131156.26386450467 131591.23710520082 114501.43871786163 163333.11875029578 119224.32418420396 1.34971816847711 1.5294500658763017 1.8473390490972146 1.1997055676883068 1.4055450708238375 1.1000797426359543 1.103728102512787 0.9603865612268402 1.3699647271469777 1.0 16.86331907936358 -5.842466658399924 1.4300508490415613 1.1039959031685074 1.551228295170622 0.5128376085059743 0.17969490269559468 0.3216621303862161 1.3710660232729244 0.06929189536593336 0.08921672070239373 1.4372533897532514e-06 5.842466658399924 0.4472323920021146 RQAS(ph)ESSSRPH ddPTM_KYSE-520_SHP099_60min_R1 4 RQASESSSRPH 11 2 A0A2R8Y653;Q9BZX2-2;Q9BZX2 A0A2R8Y653 UCK2 Uridine-cytidine kinase 2 1 RQAS(0.939)ES(0.039)S(0.011)S(0.011)RPH;RQAS(0.992)ES(0.001)S(0.005)S(0.002)RPH;RQAS(0.994)ES(0.006)SSRPH;RQAS(1)ESSSRPH 121.24 0.00016652 1607450000.0 398308.0 602376.0 571657.0 894159.0 496518.0 535348.0 463648.0 470566.0 580301.0 543003.0 True False 376213.06123268727 573436.9527751905 608506.92490354 979139.6025212936 535591.141799027 532006.6945547425 510518.0646084194 468933.71637692954 474932.9665977627 538192.4158699419 0.6990307743831192 1.0654868702456142 1.1306493866509448 1.819311409170637 0.9951666467341235 0.9885064873959609 0.9485790760971811 0.8713123829865539 0.8824594189609198 1.0 19.03776253530753 -5.97820890372662 24.99972984288722 0.93756283081141 1.197127995609169 0.1616108075514595 0.25903713150834906 437.68490496152344 502129.4693640979 0.08497055075187226 0.0963409162424808 1.0514559822696635e-06 5.97820890372662 0.25956516479775893 RQATVSWDSGGSDEAPPKPSRPGYPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RQATVSWDSGGSDEAPPKPSRPGYPSPR 28 3 E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397-7;Q05397;B4DWJ1;Q05397-6;Q05397-2;Q05397-5;E5RHK7;E5RJQ2;E5RG80 E9PEI4 PTK2 Focal adhesion kinase 1 1 RQATVSWDSGGSDEAPPKPS(0.036)RPGYPS(0.964)PR;RQATVSWDSGGSDEAPPKPS(0.002)RPGYPS(0.998)PR 162.95 6.5777e-10 4511600000.0 948170.0 1025490.0 1090580.0 877340.0 858020.0 864850.0 709850.0 688440.0 1253230.0 895120.0 True False 895573.119969965 976223.9211081296 1160880.5317896965 960722.129818111 925541.2925340079 859452.1503501805 781608.5654683862 686051.9623231046 1025675.0233573857 887189.9331928213 1.0094491455138295 1.1003550475318091 1.3084915510841255 1.0828821359149803 1.0432279018351434 0.9687352371742789 0.8809935011948696 0.7732864594778923 1.1560940729638172 1.0 19.75888346999145 -6.013417881388488 2.03018543901714 0.9352394308202583 1.138438199539255 0.3231903386326672 0.11473536433422571 0.3543425078418676 2.9331196167459423 0.042772042538759214 0.04648134078258386 9.695765844450635e-07 6.013417881388488 0.20319876871899667 RQDLPSSLPEPETQAPPRS(ph) ddPTM_KYSE-520_SHP099_60min_R1 1 RQDLPSSLPEPETQAPPRS 19 2 B5MCT7;P49593-2;P49593 B5MCT7 PPM1F Protein phosphatase 1F 1 RQDLPSSLPEPETQAPPRS(1) 128.4 1.1285e-05 387400000.0 101600.0 134780.0 114850.0 104600.0 88149.0 96637.0 89499.0 128860.0 146110.0 103630.0 True False 95964.04546542131 128304.96649109546 122253.41476649739 114541.15255086335 95085.82480079759 96033.85263732498 98546.43234606637 128413.01473615007 119580.10713336554 102711.91882291992 0.9343029179589931 1.2491731043628844 1.1902553877633997 1.1151690462363728 0.9257525892854745 0.934982558381484 0.9594449551270186 1.250225058666658 1.1642281490186854 1.0 16.648244077991684 -5.542484333037955 24.722585077064206 1.0404306256250946 1.139649357040502 0.09700493205198435 0.12187156098535386 483.722265420245 609968.8228348846 0.03878110065543807 0.05007298775948046 2.8675808202977615e-06 5.542484333037955 0.09921873141540738 RQDNQNDDS(ph)EEHDDGGYR ddPTM_KYSE-520_SHP099_60min_R1 1 RQDNQNDDSEEHDDGGYR 18 1 Q9NUP7 Q9NUP7 TRMT13 tRNA:m(4)X modification enzyme TRM13 homolog 1 RQDNQNDDS(1)EEHDDGGYR 163.4 1.6977999999999998e-08 61111000.0 42196.0 44803.0 39102.0 36852.0 45097.0 37832.0 33574.0 36979.0 43222.0 36130.0 True False 39855.3037643594 42650.596629325984 41622.577485412075 40354.403000042184 48645.87733316962 37595.876454932135 36967.987570663696 36850.72847996347 35373.97433795307 35809.916308714666 1.1129683582829333 1.1910275428079282 1.1623198760529592 1.126905817152708 1.3584471103980549 1.0498733404127738 1.0323394015212262 1.0290649149323903 0.9878262220161764 1.0 15.12807152649207 -6.496868224990163 24.64739035588938 1.0184977744191956 1.187179010311415 0.644004952522494 0.06379012105228274 401.77620097051135 380721.13812804926 0.02217856989520728 0.019486850962446553 3.1851638276349086e-07 6.496868224990163 0.1686812358922194 RQDPQVVSPFS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RQDPQVVSPFSR 12 1 Q12986-3;Q12986-2;Q12986 Q12986-3 NFX1 Transcriptional repressor NF-X1 1 RQDPQVVS(0.083)PFS(0.917)R 67.643 0.034344 0.0 188290.0 174030.0 203740.0 173450.0 169200.0 165670.0 146300.0 161200.0 221930.0 176000.0 True False 177845.17835319054 165669.33757564457 216873.40639552585 189934.63585035573 182515.0773836908 164635.99207783368 161089.4317504049 160640.8348243627 181633.1064000261 174440.77692592813 1.0195160872776208 0.949716806443667 1.243249486830798 1.0888201669212163 1.0462867719351607 0.943793045290908 0.9234620172484526 0.9208903884472768 1.0412307810183166 1.0 17.41237779547165 -6.135118175102694 3.903730270575832 0.9584610088889262 1.077358632718287 0.31516925264280204 0.07672328165881528 0.2939415562890862 7.801467033307143 0.027448807184160276 0.02759005824912546 7.326251526801798e-07 6.135118175102694 0.11889762382936075 RQEAIAQNR ddPTM_KYSE-520_SHP099_60min_R1 1 RQEAIAQNR 9 1 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 167.93 0.00023985 262840000.0 83573.0 112850.0 67310.0 65956.0 93850.0 77922.0 65822.0 77953.0 72353.0 78352.0 False True 78937.03909135489 107428.51660869665 71648.91029980777 72224.43840960556 101235.46106654478 77435.65989430179 72475.93012081448 77682.5992373669 59215.51907070276 77657.8622369336 1.0164719555441604 1.3833566043954828 0.9226227485017222 0.9300338218073696 1.3036086514675886 0.997138701269501 0.9332722796268963 1.0003185382615585 0.7625180163991203 1.0 16.24484437288103 -6.512468613033905 21.704378465571107 0.9299323309923668 1.1102520913679332 0.25770160438556367 0.15045043963716778 130.7838577100694 272680.6869511054 0.05527330077002127 0.04568781039450023 3.0727794305775175e-07 6.512468613033905 0.1803197603755664 RQEEEESVKK ddPTM_KYSE-520_SHP099_60min_R1 2 RQEEEESVKK 10 2 Q9Y5A9;Q9Y5A9-2 Q9Y5A9 YTHDF2 YTH domain-containing family protein 2 0 ; 113.63 0.00041468 39357000.0 105522.0 113116.0 71930.0 69031.0 111477.0 112135.0 79022.0 100169.0 98308.0 89155.0 False True 99668.48430710814 107681.73756942237 76566.72289206917 75591.68548507313 120249.60568263418 111435.12387063363 87010.31494039991 99821.53711862041 80457.74534300802 88365.15606154049 1.1279161238361377 1.218599529145053 0.8664809332622636 0.8554467490831853 1.3608260432300745 1.2610753925792473 0.984667699560254 1.1296481731905879 0.9105143806567209 1.0 16.431189981214466 -7.758078893487028 24.93777028558824 0.9552571679477917 1.0987026162593871 0.12271557823943857 0.1553602545466937 185.03933036931093 1373242.1485594823 0.12313204393781946 0.042218501494242396 1.7455050374756558e-08 7.758078893487028 0.14344544831159545 RQEELQR ddPTM_KYSE-520_SHP099_60min_R1 2 RQEELQR 7 1 Q9NYJ1;Q9NYJ1-2 Q9NYJ1 COA4 Cytochrome c oxidase assembly factor 4 homolog, mitochondrial 0 ; 139.97 0.0040948 307650000.0 197563.0 216740.0 129919.0 93400.0 312850.0 272580.0 120682.0 116184.0 111619.0 388260.0 False True 186603.78655792357 206327.48506662768 138293.78661774972 102276.7079182659 337469.51512699586 270878.72711158276 132881.71430281876 115780.98482154934 91351.80328601129 384820.3184617087 0.48491147064130774 0.536165777034349 0.35937236154933055 0.2657778267195184 0.8769534739641757 0.7039096277306791 0.3453084671672321 0.30087024844315763 0.23738820146291517 1.0 18.55382544966239 RQEELRR ddPTM_KYSE-520_SHP099_60min_R1 1 RQEELRR 7 2 I1E4Y6;Q6Y7W6;Q6Y7W6-3;P23246;P23246-2;H0Y9K7;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1;Q15233-2;Q15233;H7C367;C9JYS8;Q8WXF1;Q8WXF1-2 I1E4Y6;P23246;Q6Y7W6-4;Q15233-2;Q8WXF1 GIGYF2;SFPQ;NONO;PSPC1 PERQ amino acid-rich with GYF domain-containing protein 2;Splicing factor, proline- and glutamine-rich;Non-POU domain-containing octamer-binding protein;Paraspeckle component 1 0 118.74 0.028359 552860000.0 248630.0 253390.0 186220.0 156050.0 242160.0 260750.0 191910.0 199000.0 215340.0 153370.0 False True 234837.99826838283 241216.76405385605 198224.03916253496 170880.94508185665 261216.61429807649 259122.5625296986 211310.1356611091 198309.71544694903 176239.68427964486 152011.26112005426 1.5448723768097308 1.586834832344097 1.3040089115896691 1.1241334610525968 1.718403047072775 1.7046274112879756 1.3900952738904142 1.3045725295991693 1.1593857124864957 1.0 17.21381867810745 -7.692909605232283 1.5574049817795796 1.015096833500958 1.4843153707272496 0.4859456270242355 0.16964183983772507 0.35983224972220007 1.6598022132709818 0.17351488933489098 0.05356694440760787 2.02810480866295e-08 7.692909605232283 0.4692185372262916 RQEENDKLR ddPTM_KYSE-520_SHP099_60min_R1 8 RQEENDKLR 9 2 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ;;;;;;; 182.64 6.6903e-06 8275210000.0 6201360.0 6110840.0 4346450.0 3539150.0 6175020.0 5349560.0 3870400.0 4836030.0 5437150.0 3847820.0 False True 5857358.198695326 5817266.073842159 4626629.1215658905 3875509.7519157566 6660958.942942309 5316171.411721476 4261657.803463888 4819254.940667889 4449900.619397568 3813731.3083586656 1.535860218012104 1.5253476460421551 1.213150258232816 1.0161989502044073 1.7465726881029326 1.3939554158075764 1.1174509840594928 1.2636587507109869 1.1668102075373248 1.0 21.862771773291175 -6.742905884349389 0.04481708317305392 3.798226470039538e-09 2.562734974757837 0.3126449702684767 0.19356449140407653 110.14660850600492 2.9593236943563594 77.61556874090286 89.34145823667447 1.8075657998782683e-07 6.742905884349389 2.5627349709596103 RQEERLR ddPTM_KYSE-520_SHP099_60min_R1 2 RQEERLR 7 2 D6RFJ4;J3KQ80;A0A087X1J3;A0A0G2JNH6;A0A0G2JM30;A0A087X0T7;A0A0J9YW09;A0A0M3HER8;Q8TB68-2;Q8TB68;A6NEM1-2;A6NEM1;A6NEY3;A6NI86;H0YKK7;A6NEF3 D6RFJ4 PRR7;GOLGA6L4;GOLGA6L10;GOLGA6L9;GOLGA6L3;GOLGA6L19 Proline-rich protein 7;Golgin subfamily A member 6-like protein 9;Putative golgin subfamily A member 6-like protein 3;Putative golgin subfamily A member 6-like protein 10;Putative golgin subfamily A member 6-like protein 19;Putative golgin subfamily A member 6-like protein 4 0 ; 102.0 0.051914 589100000.0 340830.0 316860.0 214536.0 182980.0 308620.0 320390.0 211387.0 232859.0 244930.0 207393.0 False True 321923.48047223943 301637.5699834437 228365.33382973654 200370.36418505703 332906.6381924035 318390.32716736407 232756.06089831085 232051.2664786992 200456.88618284324 205555.6593693122 1.5661134383746382 1.4674252750273622 1.1109659278193031 0.974774252384173 1.6195449894876683 1.5489251336803485 1.1323262108786263 1.128897483001349 0.9751951699986608 1.0 17.64916956724182 -6.930835974652365 6.704605924209008 1.0564511366429927 1.3649796930284728 0.3987082011515791 0.19535192127678253 0.2648720006522044 20.441412899615536 0.09142931276016325 0.06123774322126159 1.1726381666274852e-07 6.930835974652365 0.30852855638548005 RQEHDISLDR ddPTM_KYSE-520_SHP099_60min_R1 1 RQEHDISLDR 10 1 Q92797;M0R3C7;A0A087WUE9;Q92797-2 Q92797 SYMPK Symplekin 0 95.01799999999999 0.0058499 497550000.0 124480.0 118540.0 81922.0 84493.0 142350.0 130100.0 106810.0 108160.0 113950.0 106220.0 False True 117574.84625527209 112845.16046783263 87202.82319983446 92523.18931625325 153552.13513929312 129287.9976418553 117607.39716514529 107784.8182047338 93259.55244573936 105278.97343790962 1.1167932438533341 1.0718679787886165 0.8283023699054595 0.8788382551129325 1.4585261436829413 1.228051465738365 1.1171024310424778 1.023801949097671 0.885832653950991 1.0 16.683857801152453 -2.798748457386453 14.643784909758221 1.067606668524633 41.48889971790733 0.0 0.17772992043064553 0.0 0.0 0.04392369144868671 0.0 0.0015894670986367325 2.798748457386453 40.4212930493827 RQEHGHQETR ddPTM_KYSE-520_SHP099_60min_R1 1 RQEHGHQETR 10 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 0 85.288 0.0088428 29185000.0 8653.8 11739.0 3648.4 4126.4 11810.0 13919.0 5298.8 6409.6 6581.6 6907.5 False True 8173.75646307739 11175.040819401767 3883.5817016463966 4518.571815352603 12739.37981029188 13832.126358009114 5834.454415304483 6387.366593611888 5386.5473486343035 6846.304923953681 1.1938931370817643 1.6322733129082247 0.5672522250737938 0.6600015432475315 1.8607672243343494 2.020378366381786 0.8522048725716318 0.9329655433931855 0.7867816885847408 1.0 12.741109833872118 RQEQIAK ddPTM_KYSE-520_SHP099_60min_R1 4 RQEQIAK 7 1 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 0 ;;; 155.38 0.0028783000000000003 4730820000.0 2903040.0 2936310.0 1784180.0 1648290.0 3486940.0 3680620.0 2436200.0 3011690.0 2882810.0 3790070.0 False True 2742002.5841332353 2795245.2601088337 1899191.0975889359 1804942.9860235397 3761342.340025335 3657647.885323337 2682474.871020755 3001243.150323732 2359364.3737262134 3756492.9284298383 0.7299368417231 0.7441103479668222 0.5055755817388884 0.4804861929496512 1.0012909412283983 0.9736868816234355 0.7140902224836589 0.7989481698766859 0.6280763517136168 1.0 21.840954955729284 -5.757787386763255 24.9999448449597 0.8417501455874312 0.6164295014399813 0.41298126616937514 0.13843582427322212 108.8898651596353 745406.7559694761 0.044373766095583154 0.05505180451312302 1.7466770469789502e-06 5.757787386763255 -0.2253206441474499 RQES(ph)SSSLEMPSGVALEEGAHVLR ddPTM_KYSE-520_SHP099_60min_R1 1 RQESSSSLEMPSGVALEEGAHVLR 24 1 P48553 P48553 TRAPPC10 Trafficking protein particle complex subunit 10 1 RQES(0.854)S(0.034)S(0.056)S(0.056)LEMPSGVALEEGAHVLR 252.47 3.3431e-29 512620000.0 73839.0 67996.0 55159.0 50816.0 59358.0 66314.0 50436.0 49616.0 67676.0 51927.0 True False 69743.00347560283 64729.370095923216 58714.63739752043 55645.53736161248 64029.13689917918 65900.10972807063 55534.56308792503 49443.89367646143 55387.744373127396 51466.967178594685 1.3551022587670412 1.2576876712262233 1.1408217856275797 1.0811893611006416 1.244082183373905 1.2804350701177267 1.0790331378030387 0.9606918065501504 1.0761804592240163 1.0 15.651359150139056 -1.0000000001973641 0.14719867695075203 0.9413983160002136 2.2984438163593124 0.5633441590000609 0.08176556270683637 60.14495201692975 0.5842302359224376 0.3466376039343501 17.357979150112204 0.09999999995455523 1.0000000001973641 1.3570455003590989 RQESS(ph)S(ph)SLEMPSGVALEEGAHVLR ddPTM_KYSE-520_SHP099_60min_R1 1 RQESSSSLEMPSGVALEEGAHVLR 24 1 P48553 P48553 TRAPPC10 Trafficking protein particle complex subunit 10 2 RQES(0.419)S(0.532)S(0.538)S(0.5)LEMPS(0.011)GVALEEGAHVLR 68.96 0.014609 194130000.0 40410.0 37317.0 35783.0 38153.0 29644.0 33229.0 33428.0 39764.0 65091.0 40291.0 True False 38168.37674466216 35524.235306041024 38089.629434824325 41779.04964888227 31976.814148712354 33021.60548532831 36807.228465840984 39626.067964987385 53272.115210580334 39934.05308592366 0.9557851957209952 0.8895724966760999 0.953813261901295 1.0462010845477878 0.800740512862789 0.8269034303700089 0.9217002938981707 0.9922876568458102 1.3340022134982887 1.0 15.285331884533548 -7.566062756835189 7.987713471613806 1.1678904286254101 0.9147045001557413 0.5067032625856234 0.09884144287530046 0.19224197945257301 30.520142988518277 0.06562153531253019 0.024680765617953196 2.7160467637023347e-08 7.566062756835189 -0.2531859284696688 RQESS(ph)SSLEMPSGVALEEGAHVLR ddPTM_KYSE-520_SHP099_60min_R1 1 RQESSSSLEMPSGVALEEGAHVLR 24 1 P48553 P48553 TRAPPC10 Trafficking protein particle complex subunit 10 1 RQES(0.216)S(0.261)S(0.261)S(0.261)LEMPSGVALEEGAHVLR 73.616 0.0027396 0.0 68326.0 75767.0 50660.0 75072.0 77462.0 80586.0 74268.0 85153.0 96091.0 81351.0 True False 64535.82057549585 72127.03959141448 53925.624658865905 82206.82030878021 83557.81870150975 80083.03288214115 81775.7342258311 84857.62411785965 78643.29665698591 80630.29343012032 0.8003917365304761 0.8945402096784462 0.668801046911748 1.0195525380299677 1.0363080071626753 0.9932127178917752 1.0142060849214631 1.0524285663353443 0.9753566967376043 1.0 16.299034351930196 -5.284499492446678 24.91506671401186 1.0153895705244846 0.7985739240049003 0.7782311757335342 0.05496664490530835 315.4164033714511 340787.7392028573 0.014747825673653413 0.02189083683730348 5.1939828051948285e-06 5.284499492446678 -0.2168156465195843 RQEVS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 RQEVSSPR 8 1 E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82;H7C3L4;E7EQA9;Q92844 E7EV32 TANK TRAF family member-associated NF-kappa-B activator 1 RQEVS(0.5)S(0.5)PR 75.229 0.017769 184740000.0 198940.0 193120.0 165950.0 168190.0 186260.0 174350.0 138370.0 166170.0 180160.0 152860.0 True False 187904.40162294212 183842.22532097003 176647.402529388 184174.72703183244 200917.60232556853 173261.81697815107 152357.78996106307 165593.59505436945 147447.48546401437 151505.7793232806 1.2402457679320253 1.2134337458420674 1.1659449779302518 1.2156283928868703 1.3261382055720379 1.1435987310322187 1.005623618066506 1.0929853355694668 0.9732136036170164 1.0 17.209013302075686 -6.583205021915807 4.210312502451505 1.0270279766773696 1.2277026266047546 0.8155715933952732 0.04784600645794084 0.09507050558681483 3.4414287843670914 0.019165137706599594 0.014783766247509968 2.610928495230901e-07 6.583205021915807 0.20067464992738504 RQEVSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 RQEVSSPR 8 1 E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82;H7C3L4;E7EQA9;Q92844 E7EV32 TANK TRAF family member-associated NF-kappa-B activator 1 RQEVS(0.099)S(0.901)PR 70.942 0.023809 0.0 247880.0 213650.0 197750.0 187730.0 189350.0 179530.0 169070.0 178780.0 200050.0 173810.0 True False 234129.60226347053 203385.93330481215 210497.28141118702 205571.80275691737 204250.7677458736 178409.4866767277 186161.24556418994 178159.85390756573 163725.96285011113 172270.17862213386 1.3590837609626114 1.1806218286388914 1.221902032579315 1.193310440617984 1.1856420500607223 1.035637671613844 1.0806353546107679 1.0341885945236673 0.9504022353702666 1.0 17.39431345529407 -5.887244240348603 0.46304762353928086 0.9688914753551597 1.3253623148749811 0.8448700827070277 0.046590351954634505 0.519670909053491 0.21755040255881536 0.04155197533817372 0.08498150120790561 1.2964499629706739e-06 5.887244240348603 0.3564708395198214 RQFDEES(ph)LES(ph)FS(ph)SMPDPVDPTTVTK ddPTM_KYSE-520_SHP099_60min_R1 1 RQFDEESLESFSSMPDPVDPTTVTK 25 1 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 3 RQFDEES(0.995)LES(0.947)FS(0.83)S(0.228)MPDPVDPTTVTK 79.408 0.020837 105890000.0 142260.0 149080.0 139200.0 132440.0 135470.0 148850.0 128790.0 132930.0 184060.0 140290.0 True False 134368.55421172065 141917.97302635803 148173.0547278749 145027.0577804622 146130.71828113816 147920.9719368959 141809.350069273 132468.89685609532 150639.3437750137 139047.1397439683 0.9663525223110488 1.0206464749125792 1.065631806599621 1.0430064080965988 1.0509437198795537 1.0638188761686667 1.0198652797201788 0.9526905558792098 1.0833688780106552 1.0 17.085214542604806 -9.776762709895982 13.8724548658114 0.9999988678786876 1.0298696155069613 0.04666378685548933 0.040108019554243673 0.0 0.0 0.03911194911192406 0.009486041024249752 1.672003915379468e-10 9.776762709895982 0.029870747628273686 RQFDEES(ph)LES(ph)FSSMPDPVDPTTVTK ddPTM_KYSE-520_SHP099_60min_R1 2 RQFDEESLESFSSMPDPVDPTTVTK 25 1 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 2 RQFDEES(0.731)LES(0.568)FS(0.418)S(0.283)MPDPVDPTTVTK;RQFDEES(0.657)LES(0.729)FS(0.31)S(0.304)MPDPVDPTTVTK 56.708999999999996 0.03547 103940000.0 141214.0 141959.0 117145.0 122553.0 145319.0 136097.0 126368.0 126558.0 162499.0 122294.0 True False 133380.57791687004 135139.07655519672 124696.35413862708 134200.40027309684 156754.77854799377 135247.56814038104 139142.51067283095 126118.99983685925 132993.27786643457 121210.57030329219 1.1004038474790288 1.1149116468724858 1.0287580846011433 1.1071674684584156 1.293243470068354 1.1158067139026373 1.1479404009458052 1.0404950617861564 1.0972085811795107 1.0 16.887155990567695 -7.264385567934416 24.91075669791452 1.051638860986136 1.1301762423389574 0.25032093283359114 0.06626822480357172 417.54225966508926 3530378.8955708463 0.03658393643252881 0.018825217509795517 5.440194562890394e-08 7.264385567934416 0.0785373813528214 RQFS(ph)APNLK ddPTM_KYSE-520_SHP099_60min_R1 6 RQFSAPNLK 9 1 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 RQFS(1)APNLK;RQFS(1)APNLK;RQFS(1)APNLK;RQFS(1)APNLK;RQFS(1)APNLK;RQFS(1)APNLK 116.03 0.00054639 2082510000.0 4104220.0 3742310.0 3576240.0 3323660.0 3831970.0 3445590.0 3323470.0 3540450.0 4342270.0 3859260.0 True False 3876550.7350402693 3562523.8102781684 3806770.1525863097 3639539.6471051793 4133524.23807318 3424084.794733281 3659438.781541477 3528169.0052972427 3553823.227718837 3825069.9588588425 1.0134587802929453 0.9313617394179632 0.9952158244242957 0.9514962304613603 1.0806401667242604 0.895169194697503 0.9566985233998755 0.9223802553273623 0.9290871189135249 1.0 21.867054703632924 RQGS(ph)FSEDVISHK ddPTM_KYSE-520_SHP099_60min_R1 5 RQGSFSEDVISHK 13 1 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5;E9PNZ4 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 RQGS(0.75)FS(0.25)EDVISHK;RQGS(0.71)FS(0.29)EDVISHK;RQGS(0.971)FS(0.029)EDVISHK;RQGS(0.977)FS(0.023)EDVISHK;RQGS(0.5)FS(0.5)EDVISHK 185.71 2.0026999999999998e-08 4623390000.0 4398880.0 4372640.0 4091890.0 3956590.0 4075580.0 3843010.0 3562930.0 3834540.0 4977320.0 3868040.0 True False 4154865.3574501257 4162571.810933554 4355659.776655486 4332623.12400784 4396304.959121879 3819024.34909782 3923105.7352458714 3821238.87572836 4073564.156026574 3833772.1748895836 1.0837538507540005 1.0857639998009116 1.1361290076609556 1.1301201339989964 1.1467308850319196 0.9961531814831464 1.0233017394568733 0.9967308179543599 1.0625472694250269 1.0 21.870333175520926 -6.2649840432460175 24.999167678837978 1.0160144712410832 1.116639266220144 0.790070813896053 0.02596733298140933 149.07534398127194 1051368.010281946 0.009289539029745894 0.008517812205976028 5.43270291845378e-07 6.2649840432460175 0.10062479497906085 RQGSFS(ph)EDVISHK ddPTM_KYSE-520_SHP099_60min_R1 3 RQGSFSEDVISHK 13 1 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5;E9PNZ4 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 RQGS(0.261)FS(0.739)EDVISHK;RQGS(0.259)FS(0.741)EDVISHK;RQGS(0.487)FS(0.513)EDVISHK 209.42 2.5915999999999997e-11 5515790000.0 4515250.0 4407870.0 4223250.0 4197790.0 4155320.0 3905370.0 3765810.0 3894700.0 4999100.0 3795160.0 True False 4264780.081572282 4196109.3088522395 4495487.452438915 4596746.699488412 4482320.043463344 3880995.1372065516 4146494.825563863 3881190.194729814 4091389.457055692 3761537.834989799 1.133786304606942 1.1155302679186314 1.195119562701702 1.2220392034155567 1.1916190239451623 1.0317575702962658 1.1023403212891272 1.0318094260881838 1.0876906298795177 1.0 21.842891170942362 -6.259899686227248 24.99883478670512 1.055933972175534 1.1726095651445936 0.7008967868314624 0.03941291567691749 87.82421207807606 1425942.4695773623 0.0140342099572653 0.013338036431414306 5.496678220177201e-07 6.259899686227248 0.1166755929690595 RQGSVVS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 1 RQGSVVSSR 9 1 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 RQGS(0.007)VVS(0.776)S(0.217)R 60.06399999999999 0.038665 542360000.0 423700.0 502290.0 418420.0 509380.0 494490.0 387060.0 415800.0 423610.0 429970.0 380550.0 True False 400196.5163749903 478159.2344473386 445392.02269567124 557791.3220493183 533403.5497367689 384644.21496738296 457833.12181694084 422140.59578131716 351898.2866616461 377178.6230634199 1.0610265054912724 1.2677262315763307 1.1808517117916881 1.4788518965337272 1.414193480543782 1.0197932529774036 1.2138363465523323 1.119206047131513 0.9329751612208333 1.0 18.524888386732083 -7.2283291530485805 1.0822703155455762 0.9727368009753595 1.2656972634708705 0.3917937993054451 0.13250879215828912 0.5694329943472278 1.1833105475031176 0.1207208231150734 0.04850793410194511 5.911134577542025e-08 7.2283291530485805 0.292960462495511 RQGSVVSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RQGSVVSSR 9 1 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 RQGS(0.252)VVS(0.289)S(0.459)R 58.37 0.045742000000000005 807600000.0 562410.0 668740.0 605320.0 591990.0 675340.0 538230.0 583870.0 574870.0 627910.0 565030.0 True False 531211.9961634601 636612.7266007953 644339.8957462437 648252.5516117165 728485.4158410268 534870.7069237191 642893.2776220712 572875.9101456666 513897.3723229867 560024.2737866883 0.9485517343232112 1.1367591663415635 1.1505570845874993 1.1575436672208141 1.300810429010984 0.9550848632097863 1.1479739499058703 1.0229483559205033 0.917634103336615 1.0 19.095129835379765 -7.460116589107674 3.7962823905652106 0.9594912882627066 1.1186677924626613 0.29255452429439277 0.0981257074358291 0.28432330110515425 8.003755188663149 0.06413330318391826 0.026244296167851396 3.466437792395906e-08 7.460116589107674 0.15917650419995477 RQGYGEGFR ddPTM_KYSE-520_SHP099_60min_R1 1 RQGYGEGFR 9 1 H0Y5E8;Q9H029;Q9NR31-2;Q9Y6B6;Q9NR31 H0Y5E8 SAR1A;DKFZp434B2017;SAR1B GTP-binding protein SAR1a;GTP-binding protein SAR1b 0 107.95 0.019043 0.0 195430.0 187280.0 127690.0 97719.0 147930.0 163210.0 111490.0 113770.0 151590.0 126290.0 False True 184589.10831995372 178282.78768698903 135921.1017112236 107006.18437971121 159571.2493934361 162191.3458503243 122760.49723754382 113375.35842411773 124065.07727292365 125171.16885213314 1.4746934938189482 1.4243119188061395 1.0858818604769085 0.8548788459914396 1.2748243134322759 1.2957564216878388 0.9807409994114772 0.9057625606903935 0.9911633678158256 1.0 16.933542773576367 -4.7592369523132945 4.6682786059454635 1.050661537911279 1.4606591063852472 0.5889308172001583 0.13452511628198627 0.13498461089720507 7.456414040946247 0.03868445661970544 0.09774704134380452 1.7408567977779172e-05 4.7592369523132945 0.4099975684739683 RQHEAEEGVR ddPTM_KYSE-520_SHP099_60min_R1 5 RQHEAEEGVR 10 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;;; 156.12 0.0002096 1389165000.0 862363.0 842862.0 625293.0 523182.0 865686.0 830262.0 579152.0 670665.0 723790.0 552656.0 False True 814526.0053119784 802369.6443583441 665600.3872841732 572905.0599795961 933810.5631204344 825080.0268879476 637698.336138829 668338.619649387 592367.9812610942 547759.8977998613 1.4870128473873552 1.46481998331961 1.2151316479312038 1.045905445580688 1.7047808115767304 1.5062804528078333 1.1641931778872743 1.2201306125801534 1.0814372933111867 1.0 19.06318412280386 -7.321439378353505 1.4738546565518835 1.0442391732987684 1.387974259502395 0.38426241711239584 0.17575655920810326 0.5186372638998751 1.995305904162261 0.15826301893953015 0.05839391968135778 4.770463987088689e-08 7.321439378353505 0.3437350862036266 RQHEQLR ddPTM_KYSE-520_SHP099_60min_R1 1 RQHEQLR 7 1 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 119.41 0.0062669 102270000.0 95094.0 92196.0 68154.0 46234.0 92017.0 92874.0 54525.0 64082.0 53417.0 61945.0 False True 89818.94625481083 87766.76577098263 72547.3158902556 50628.065459241014 99258.21439488824 92294.33891613885 60036.91911271931 63859.71449885124 43717.81933298872 61396.21549248071 1.4629394586350537 1.4295142634928624 1.1816252078133478 0.8246121532595362 1.6166829437075734 1.5032577851226396 0.9778602578537129 1.0401246068118357 0.7120604907372982 1.0 15.90586210911066 -6.862722016240227 6.6557594435920215 0.9282062487318564 1.3223285084880843 0.44777324173984845 0.21985949946218594 0.23305485348033286 13.277825443279085 0.09919063950224115 0.06670120134332638 1.371759522782713e-07 6.862722016240227 0.39412225975622783 RQKIEMWDS(ph)MQEGK ddPTM_KYSE-520_SHP099_60min_R1 1 RQKIEMWDSMQEGK 14 2 A0A182DWI4;E9PN30;Q9BQE4 A0A182DWI4 VIMP Selenoprotein S 1 RQKIEMWDS(1)MQEGK 53.565 0.04289 1579900000.0 1633400.0 1688800.0 1643400.0 1660400.0 1346300.0 1508800.0 1476900.0 1717200.0 2289000.0 1437400.0 True False 1542792.0458978277 1607667.513059521 1749336.1935329703 1818203.916782537 1452246.150600845 1499383.0195390573 1626199.4651549784 1711243.4339974925 1873375.300994275 1424665.7542802768 1.0829150916716088 1.1284524164558827 1.2278923588057418 1.2762319240986253 1.0193592049487434 1.0524454701282033 1.1414603462385562 1.2011543260980475 1.3149577684210432 1.0 20.442192052668307 -10.59142116096988 2.704680828752542 0.9875770575577124 1.1582824343486489 0.21912716571679858 0.0908278393823073 68073226.10334998 65061951.48096775 6028668.834310821 0.02519479643417464 2.561998310589643e-11 10.59142116096988 0.17070537679093645 RQLHLEGASLELS(ph)DDDTESK ddPTM_KYSE-520_SHP099_60min_R1 5 RQLHLEGASLELSDDDTESK 20 1 P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35580 MYH10 Myosin-10 1 RQLHLEGAS(0.001)LELS(0.991)DDDT(0.007)ES(0.001)K;RQLHLEGASLELS(0.995)DDDT(0.005)ESK;RQLHLEGASLELS(1)DDDTESK;RQLHLEGASLELS(1)DDDTESK;RQLHLEGASLELS(1)DDDTESK 367.24 2.4272999999999996e-78 4628770000.0 2330690.0 2837570.0 2566270.0 4007090.0 2366400.0 2290480.0 2363670.0 2296620.0 3243410.0 2070630.0 True False 2201401.979584675 2701248.877920597 2731695.870377175 4387922.628824466 2552622.2170258034 2276184.2647095826 2602612.830796174 2288653.561255137 2654488.503712471 2052285.8291257631 1.0726585684813856 1.316214749224907 1.3310503983457451 2.1380660366853683 1.2437946901934096 1.1090971015860867 1.268153194774453 1.1151729105053863 1.2934302162205327 1.0 20.968800243517304 -5.979699752254776 24.999053042420083 1.1718762882831826 1.4751933575657332 0.22920184757459972 0.2661256082561801 383.0623962713942 471725.8296661244 0.08571252664719145 0.0971788466497486 1.0478527264656818e-06 5.979699752254776 0.30331706928255064 RQLLS(ph)LLR ddPTM_KYSE-520_SHP099_60min_R1 2 RQLLSLLR 8 1 A0A0B4J229 A0A0B4J229 ADAMTS13 1 RQLLS(1)LLR;RQLLS(1)LLR 77.192 0.015309 1056230000.0 1750760.0 1604170.0 1518240.0 1145420.0 1449550.0 1396910.0 1079740.0 1185820.0 1827470.0 1335730.0 True False 1653641.8527464648 1527103.2652917397 1616108.1796698913 1254280.3724169182 1563621.338188706 1388191.3665325448 1188890.6564469044 1181706.6671924675 1495647.514769772 1323896.4713822163 1.2490718787247594 1.153491453676408 1.2207209661814347 0.9474157530666916 1.1810752366128785 1.0485648965309209 0.8980238879295759 0.8925974898616541 1.1297314760634105 1.0 20.336358877222104 -5.1289119712952385 0.6195982661017708 0.9796919232316509 1.280838284479437 0.4481446599589556 0.09368729359545264 1.3850372850631496 0.799331910816703 0.05529395560803476 0.2607427612873094 7.431697583726378e-06 5.1289119712952385 0.30114636124778615 RQLQEDQENNLQDNQTSNS(ph)SPCR ddPTM_KYSE-520_SHP099_60min_R1 1 RQLQEDQENNLQDNQTSNSSPCR 23 1 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 RQLQEDQENNLQDNQT(0.013)S(0.01)NS(0.488)S(0.488)PCR 98.565 0.0013155999999999999 38943000.0 33859.0 31449.0 33052.0 31010.0 28934.0 28172.0 24789.0 30225.0 37539.0 31656.0 True False 31980.77377375687 29938.142834088616 35182.584805069804 33957.18107650354 31210.94118805974 27996.168098127207 27294.91403732597 30120.156529568045 30722.863881181358 31375.552467995345 1.0192895824345685 0.9541869538274119 1.1213375395049323 1.0822815346802765 0.9947535177235997 0.8922924345853263 0.8699421011046153 0.9599880850000054 0.9791975428168233 1.0 14.937353242144965 -6.019151599738414 5.7231301801096865 0.933971487833463 1.0431716841907992 0.45080243456213853 0.05391829910460614 0.16447156942515423 18.263461155001817 0.01877201472980838 0.01975641831253823 9.56860000628788e-07 6.019151599738414 0.10920019635733624 RQLS(ph)APHITR ddPTM_KYSE-520_SHP099_60min_R1 5 RQLSAPHITR 10 1 A6ND36;A6ND36-2;K7EKG0 A6ND36 FAM83G Protein FAM83G 1 RQLS(1)APHITR;RQLS(1)APHITR;RQLS(1)APHITR;RQLS(1)APHITR;RQLS(1)APHITR 134.43 0.00019182 5597210000.0 3644350.0 3256350.0 3158370.0 2695500.0 2391730.0 2478950.0 2102380.0 2636610.0 3789140.0 2586840.0 True False 3442190.640668389 3099910.058119 3361963.5837706737 2951679.509568377 2579945.543917817 2463477.953530187 2314909.0876515154 2627464.215299403 3101127.6924462407 2563922.610131068 1.342548572670227 1.2090497762569097 1.3112578244312958 1.151235804819197 1.0062493827713193 0.9608238344620914 0.9028779100057068 1.0247829653349352 1.209524686974741 1.0 21.28992128538959 -5.546503949426114 2.884373133181896 1.0097327699483272 1.2791748019393683 0.6933257608582982 0.08048823280412669 0.15591370778446617 2.64057946069752 0.026014833386487152 0.03722815872438397 2.841162347648765e-06 5.546503949426114 0.2694420319910411 RQLS(ph)PQSK ddPTM_KYSE-520_SHP099_60min_R1 10 RQLSPQSK 8 1 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RQLS(0.999)PQS(0.001)K;RQLS(0.998)PQS(0.002)K;RQLS(0.996)PQS(0.004)K;RQLS(0.981)PQS(0.019)K;RQLS(0.993)PQS(0.007)K;RQLS(1)PQSK;RQLS(0.831)PQS(0.169)K;RQLS(0.584)PQS(0.416)K;RQLS(0.996)PQS(0.004)K;RQLS(0.992)PQS(0.008)K 158.05 0.00026659 15683590000.0 13597360.0 12248880.0 11811840.0 10612970.0 11678880.0 11360510.0 11726650.0 11604710.0 13606650.0 11145240.0 True False 12843087.335134838 11660425.418856272 12573250.106012212 11621623.477894232 12597941.412262624 11289604.843122788 12912094.223075105 11564455.969569687 11136025.355733408 11046501.844465518 1.162638409513274 1.055576288587535 1.1382110176636253 1.0520636887157955 1.1404462326301428 1.0220072383167227 1.1688853543752658 1.0468885202208762 1.0081042408292125 1.0 23.3970862401041 -7.501224991464041 7.127845615143959 1.0111292668445935 1.1016388258150287 0.43468717093716425 0.04705954650787614 0.15283254993145112 36.077799604447485 0.02533474975843628 0.011187323216192868 3.1533705587072916e-08 7.501224991464041 0.09050955897043522 RQPS(ph)EPKR ddPTM_KYSE-520_SHP099_60min_R1 2 RQPSEPKR 8 2 Q9UL26 Q9UL26 RAB22A Ras-related protein Rab-22A 1 RQPS(1)EPKR;RQPS(1)EPKR 84.882 0.004057 838170000.0 133579.0 157085.0 334340.0 441370.0 475010.0 564030.0 497200.0 564660.0 685930.0 481590.0 True False 126169.10658686531 149538.40081060783 355892.09136291407 483317.67209727044 512390.5845628065 560509.6795536948 547461.8282043847 562701.3262526349 561382.4028881615 477323.48727135034 0.26432620633884774 0.313285234852895 0.7455993699312672 1.0125579088097807 1.0734661046996021 1.1742763440321857 1.1469408960660716 1.1788678773578738 1.1761047127543194 1.0 18.8646078021033 -4.96079632439936 1.4438501479849408 1.1401341014454245 0.20008677375652284 0.9709061778195165 0.056940287471460044 0.06583490253170984 0.2498173107291239 0.017153254143582302 0.06169045764798655 1.094469530690966e-05 4.96079632439936 -0.9400473276889016 down RQQDPS(ph)PGSNLGGGDDLK ddPTM_KYSE-520_SHP099_60min_R1 2 RQQDPSPGSNLGGGDDLK 18 1 Q13951-2;J3KTD8 Q13951-2 CBFB Core-binding factor subunit beta 1 RQQDPS(0.999)PGS(0.001)NLGGGDDLK;RQQDPS(0.998)PGS(0.002)NLGGGDDLK 143.31 3.9454e-06 968160000.0 899010.0 817040.0 794490.0 707910.0 852490.0 856720.0 778710.0 817620.0 989980.0 864560.0 True False 849140.1231679961 777788.1719979579 845704.0966289454 775189.5535590978 919576.1129954046 851372.8926958522 857429.6062772237 814783.8670539435 810224.5873649241 856900.6710175017 0.9909434685816144 0.9076759982862377 0.9869336379731606 0.904643419917762 1.0731420152857165 0.9935491025872512 1.000617265545018 0.9508498413082721 0.9455291783152026 1.0 19.708768456212567 -10.435158359705627 5.802561455210876 1.0000142959951421 0.9729136197376458 0.029771064311537976 0.04681257113740022 8.694119340625786e-06 8.463008758550734e-07 0.04551627361950111 0.01103349468953093 3.671484003069238e-11 10.435158359705627 -0.027100676257496348 RQQEGFK ddPTM_KYSE-520_SHP099_60min_R1 2 RQQEGFK 7 1 Q15233-2;Q15233;H7C367;Q8WXF1;Q8WXF1-2;A0A0U1RQF9 Q15233-2;Q8WXF1 NONO;PSPC1 Non-POU domain-containing octamer-binding protein;Paraspeckle component 1 0 ; 101.54 0.01187 2433800000.0 2724000.0 2339990.0 1619630.0 1404690.0 2402500.0 2637700.0 1646420.0 2055160.0 2069650.0 2212420.0 False True 2572894.289840624 2227573.3680034014 1724033.9412996266 1538191.3152645498 2591563.0816449 2621237.135894867 1812856.2011107453 2048031.1296379492 1693853.7316307547 2192819.6800367124 1.1733268874153613 1.015848858108619 0.7862178349615881 0.7014673068050891 1.1818404884078348 1.195372861598443 0.8267237920267089 0.9339715199945947 0.7724546377668391 1.0 21.064355750504532 RQQPPLGPSS(ph)SLLSLPGLK ddPTM_KYSE-520_SHP099_60min_R1 1 RQQPPLGPSSSLLSLPGLK 19 1 Q4KMP7;Q4KMP7-2 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 RQQPPLGPS(0.095)S(0.452)S(0.452)LLSLPGLK 78.324 0.0045137 1006500000.0 244030.0 243650.0 255400.0 240370.0 276840.0 229760.0 202720.0 248970.0 344920.0 222740.0 True False 230493.1694382554 231944.6882738941 271863.4926544481 263214.69253012456 298625.73299586866 228325.98261485528 223212.91595654198 248106.3811800346 282291.22272562044 220766.6968890975 1.0440576984038674 1.0506325978614965 1.231451557165885 1.192275357828771 1.3526756399579767 1.0342410600524372 1.0110805619774859 1.1238397125843271 1.278685719827705 1.0 17.752163029448276 RQQVLDR ddPTM_KYSE-520_SHP099_60min_R1 2 RQQVLDR 7 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3;A0A0D9SFF6 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 0 ; 140.09 0.0040854 647610000.0 621770.0 544240.0 435810.0 440660.0 567680.0 542400.0 429390.0 527420.0 548330.0 478000.0 False True 587279.1786322339 518093.8934791056 463903.00992065464 482540.1939107394 612353.1863426329 539014.680406936 472796.93164255866 525590.5031207531 448767.0942744386 473765.291878373 1.2395994149419511 1.0935665874234468 0.9791831902277673 1.0185216228009777 1.2925243719623065 1.137725134464502 0.997956033815869 1.1093900548030962 0.9472350591474902 1.0 18.8538129848151 -7.356304180914269 1.344790529933208 0.9870978453789996 1.1156395897505604 0.2246884710977437 0.09633335506736021 0.8088497080602463 2.566207668504342 0.08864934702812698 0.03213072744446873 4.402464058406022e-08 7.356304180914269 0.12854174437156085 RQRS(ph)MS(ph)PT(ph)S(ph)TPKAGK ddPTM_KYSE-520_SHP099_60min_R1 1 RQRSMSPTSTPKAGK 15 3 E9PQ01;E9PKN0;O94913 E9PQ01 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 4 RQRS(1)MS(1)PT(0.992)S(0.794)T(0.214)PKAGK 58.32 0.029733 101280000.0 327770.0 382540.0 384430.0 486450.0 309940.0 273240.0 299270.0 257700.0 407140.0 338570.0 True False 309587.9447067039 364162.2041957534 409210.97290974756 532682.0617434744 334330.5146826308 271534.6078067682 329523.13219373696 256806.09884763212 333213.63916418026 335570.5332034744 0.9225719009093808 1.0852031634581643 1.219448468860706 1.5873922440635773 0.9963047455060908 0.8091729783738855 0.9819787483960322 0.7652820299686945 0.9929764570899763 1.0 18.35625651122868 -5.9862857038430315 24.99853885787318 0.900053787023477 1.2082622771456812 0.39758219268167594 0.170992840351397 239.3525357777536 436291.40409736166 0.05518368095381154 0.06254307740804857 1.0320822194462504e-06 5.9862857038430315 0.3082084901222042 RQS(ph)DPSIR ddPTM_KYSE-520_SHP099_60min_R1 2 RQSDPSIR 8 1 E9PP00;Q9C0D7;Q9C0D7-2;Q5HYM0-2;Q5HYM0 E9PP00;Q5HYM0-2 ZC3H12C;ZC3H12B Probable ribonuclease ZC3H12C;Probable ribonuclease ZC3H12B 1 RQS(0.893)DPS(0.107)IR;RQS(0.999)DPS(0.001)IR 59.542 0.02671 0.0 242826.0 263383.0 270004.0 241473.0 313484.0 282179.0 245233.0 260587.0 310075.0 322504.0 True False 229355.9577183702 250729.6853340572 287408.88986167446 264422.5213184953 338153.4073200289 280417.8161920148 270023.54488343897 259683.08451846303 253773.19635465275 319646.8654643152 0.7175291939284637 0.7843958831564022 0.8991450281991276 0.8272332686084635 1.05789683508653 0.8772737870733792 0.8447558041628407 0.8124061662273787 0.7939173624807014 1.0 18.286119420925978 -4.575117799809263 2.8113343051378163 0.8846412656062455 0.7208837902187666 0.34042735021804993 0.07895944081454313 0.338578447171079 5.034830817062563 0.02158915582444145 0.09125622245578412 2.6600034517355333e-05 4.575117799809263 -0.16375747538747887 RQS(ph)FAVLR ddPTM_KYSE-520_SHP099_60min_R1 2 RQSFAVLR 8 1 C9JUG3;Q8TE77-4;Q8TE77;Q8TE77-2;A0A087WWG1 C9JUG3 SSH3 Protein phosphatase Slingshot homolog 3 1 RQS(1)FAVLR;RQS(1)FAVLR 69.786 0.024591 1887520000.0 2242800.0 2740200.0 2581300.0 2325800.0 3040700.0 2106000.0 2281500.0 2559500.0 2652100.0 2370700.0 True False 2118387.4130890425 2608556.678875943 2747694.728226029 2546843.332722733 3279985.790783623 2092855.6728189653 2512136.285294253 2550621.6918917885 2170545.494000401 2349697.4423766923 0.9015575260388919 1.1101670503745442 1.1693823547966102 1.0839026705270742 1.3959183559675472 0.8906915567402012 1.0691318124572053 1.0855106899686044 0.923755312005157 1.0 21.164043570163695 RQS(ph)ILFSTEV ddPTM_KYSE-520_SHP099_60min_R1 5 RQSILFSTEV 10 1 P11274;P11274-2 P11274 BCR Breakpoint cluster region protein 1 RQS(1)ILFSTEV;RQS(1)ILFSTEV;RQS(1)ILFSTEV;RQS(1)ILFSTEV;RQS(1)ILFSTEV 159.01 8.560200000000001e-05 2769570000.0 1777510.0 1947480.0 1929940.0 1980630.0 1832600.0 1693530.0 1948500.0 2420720.0 2671060.0 2640320.0 True False 1678907.9769216627 1853920.1375729262 2054347.0204131794 2168868.479701876 1976815.1939323386 1682960.0510869413 2145473.395527437 2412323.0873202933 2186062.8359431066 2616928.8189378777 0.6415566081782363 0.7084335363486766 0.7850221242345327 0.8287839027208032 0.7553950950544618 0.6431050164253216 0.8198440018701814 0.9218145598241274 0.8353543360152819 1.0 21.31944325260888 -7.594658899822176 0.7814139833106474 0.988640626633654 0.7299769304544882 0.6184804084984666 0.06688610514646083 0.4382748211574122 0.5527536136112174 0.06796402595282408 0.027784872659483473 2.5429692004062335e-08 7.594658899822176 -0.25866369617916585 RQS(ph)IPEEFK ddPTM_KYSE-520_SHP099_60min_R1 6 RQSIPEEFK 9 1 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;F5H3G9 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 RQS(1)IPEEFK;RQS(1)IPEEFK;RQS(1)IPEEFK;RQS(1)IPEEFK;RQS(1)IPEEFK;RQS(1)IPEEFK 150.26 0.0001784 7876050000.0 11214040.0 9651440.0 8406360.0 9161020.0 9485930.0 9603010.0 9121880.0 9974330.0 10959800.0 9324200.0 True False 10591974.84656548 9187770.335293211 8948247.416251557 10031680.586438896 10232418.723441333 9543074.052534303 10044008.65136968 9939731.37725612 8969776.59407473 9241594.842117835 1.1461198015621064 0.9941758421848009 0.9682579218329967 1.0854923590374583 1.1072135165250803 1.0326219895555797 1.08682633495194 1.0755428632249255 0.9705875173401549 1.0 23.1397104114709 -7.762412963726842 24.99999763334055 0.9852937333701597 1.058777997738122 0.2700383396724101 0.05023945531225931 37.27021125286451 956795.9523716844 0.041502291644872444 0.013077994025868246 1.7281722860916244e-08 7.762412963726842 0.0734842643679623 RQS(ph)LATK ddPTM_KYSE-520_SHP099_60min_R1 9 RQSLATK 7 1 F5H6E2;O00159-2;O00159-3;O00159 F5H6E2 MYO1C Unconventional myosin-Ic 1 RQS(1)LATK;RQS(0.984)LAT(0.016)K;RQS(1)LATK;RQS(0.898)LAT(0.102)K;RQS(0.926)LAT(0.074)K;RQS(1)LATK;RQS(1)LATK;RQS(0.993)LAT(0.007)K;RQS(0.991)LAT(0.009)K 136.49 0.0011648 10754400000.0 15463640.0 13421900.0 11491500.0 12315590.0 13694010.0 13890820.0 13914140.0 12043440.0 14568930.0 15901020.0 True False 14605841.063197924 12777091.777317371 12232260.477050092 13486059.970782835 14771650.678741349 13804122.23984196 15320717.06012018 12001664.11760004 11923579.564838152 15760149.33360636 0.9267577834464403 0.8107214917102322 0.7761513053030831 0.8557063569204677 0.9372785984484822 0.8758877817487782 0.972117505730155 0.7615196952485809 0.7565651385937537 1.0 23.90977786917287 -4.229875955215302 21.70620874176771 0.8567657861595535 0.9267584831321594 0.05256947241745813 0.08270544556793842 6637.682172908901 4564287.626114999 0.02096617096784643 1.9706222273272502 5.890118670642089e-05 4.229875955215302 0.0699926969726059 RQS(ph)LELQK ddPTM_KYSE-520_SHP099_60min_R1 4 RQSLELQK 8 1 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 RQS(1)LELQK;RQS(1)LELQK;RQS(1)LELQK;RQS(1)LELQK 150.86 0.00041732 2715930000.0 5712710.0 5120140.0 5305090.0 4529360.0 4566080.0 4667840.0 4891240.0 5072630.0 5737920.0 4877630.0 True False 5395814.588294947 4874160.788913176 5647064.589844115 4959829.012598264 4925404.518558642 4638706.279112666 5385694.273102191 5055034.230490738 4696058.369192256 4834417.99293872 1.1161249598558125 1.0082208025935089 1.1680960558421651 1.025941285971284 1.0188205748350307 0.9595170061604281 1.114031571322273 1.0456344978597747 0.9713802935640742 1.0 22.204910785967023 -5.4725646508164925 24.90685547003327 1.0223679696069574 1.0899653483635157 0.2995133094459832 0.054293045128419225 493.6540858209976 244371.52289062645 0.015098669379798034 0.022394539921308985 3.368490673072553e-06 5.4725646508164925 0.06759737875655825 RQS(ph)LTSPDSQS(ph)ARPANR ddPTM_KYSE-520_SHP099_60min_R1 2 RQSLTSPDSQSARPANR 17 2 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 2 RQS(0.995)LT(0.039)S(0.005)PDS(0.179)QS(0.782)ARPANR;RQS(0.994)LT(0.229)S(0.097)PDS(0.107)QS(0.573)ARPANR 101.6 0.00062195 945840000.0 519490.0 603410.0 583950.0 478750.0 503600.0 569840.0 480510.0 475560.0 756220.0 506220.0 True False 490672.8541223598 574421.2778631247 621592.3513530358 524250.2560585643 543230.4549079591 566283.417188585 529084.6401256813 473910.39335653896 618909.5107548666 501735.2846332005 0.9779516592720242 1.1448692078394729 1.23888506627047 1.0448742038181023 1.0827033129732826 1.1286497771480697 1.0545095318788968 0.9445426858966013 1.2335379426370776 1.0 18.936566873921013 -6.7778132375336275 23.092990775121848 1.053526027190019 1.1075059657829236 0.05009067474257689 0.09358067728690435 299.9514048885262 423030.0913091894 0.0384564315689813 0.02604075298699881 1.6679643438438865e-07 6.7778132375336275 0.05397993859290451 RQS(ph)LTSPDSQSAR ddPTM_KYSE-520_SHP099_60min_R1 2 RQSLTSPDSQSAR 13 1 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 RQS(0.554)LT(0.145)S(0.301)PDSQSAR;RQS(1)LTSPDSQSAR 125.98 4.2692e-05 1200100000.0 510020.0 437190.0 394760.0 430000.0 412887.0 485530.0 471052.0 454213.0 484383.0 488950.0 True False 481728.1739003366 416186.7361644315 420206.8612383322 470867.0707157856 445378.8578943252 482499.62717179145 518670.53318449645 452637.44111711066 396431.25750175206 484618.283397344 0.9940363176627454 0.8587928900387675 0.8670883366028512 0.9716246514985825 0.9190302412283403 0.9956281958437473 1.0702661268750207 0.9340081805085099 0.8180278604484957 1.0 18.886489309414056 -5.276909061520138 23.786799663147622 0.9601953583278542 0.9018545496440773 0.10093093346706605 0.0701701562547078 924.6396620637535 1421760.927742199 0.0206335251843082 0.03075228307196725 5.285559164083969e-06 5.276909061520138 -0.05834080868377689 RQS(ph)LTSPDSQSARPANR ddPTM_KYSE-520_SHP099_60min_R1 4 RQSLTSPDSQSARPANR 17 2 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 RQS(0.999)LT(0.001)SPDSQSARPANR;RQS(0.978)LT(0.022)SPDSQSARPANR;RQS(0.919)LT(0.061)S(0.02)PDSQSARPANR;RQS(0.947)LT(0.042)S(0.011)PDSQSARPANR 174.91 1.0813999999999998e-08 2258470000.0 633714.0 573878.0 543508.0 426982.0 481573.0 478025.0 411328.0 455850.0 592494.0 471852.0 True False 598560.6211424599 546308.0394715604 578543.3953235467 467562.24090318097 519470.055324445 475041.46866062906 452909.04841442703 454268.76274619024 484912.02515827934 467671.75837530056 1.279873352245749 1.1681441731043234 1.237071482215253 0.9997658240632274 1.1107578039971724 1.0157582966115615 0.9684336081952876 0.9713410198732706 1.0368640322496097 1.0 18.835136784779948 -5.126227250693206 0.773600058423112 0.9921415017108206 1.29301193508373 0.782109470941803 0.050361355050482025 0.4576182918407545 0.44020055674737885 0.022554796153356933 0.09794339961465319 7.477781127103497e-06 5.126227250693206 0.3008704333729093 RQS(ph)MLF ddPTM_KYSE-520_SHP099_60min_R1 6 RQSMLF 6 1 Q00537 Q00537 CDK17 Cyclin-dependent kinase 17 1 RQS(1)MLF;RQS(1)MLF;RQS(1)MLF;RQS(1)MLF;RQS(1)MLF;RQS(1)MLF 118.32 0.0087881 3737260000.0 3186120.0 2800640.0 2530670.0 2447740.0 2238660.0 2241660.0 2445440.0 2696030.0 2728180.0 3082520.0 True False 3009379.5722272443 2666093.050553656 2693801.0374151636 2680372.4736601366 2414829.8057669783 2227668.9684384456 2692648.9403944644 2686678.101188132 2232811.2838211297 3055211.2709642714 0.984998844704261 0.8726378682519709 0.8817069585387327 0.8773116606152641 0.7903969943803006 0.7291374542930903 0.8813298661158131 0.8793755530825125 0.7308205835193913 1.0 21.54284071664595 -3.342036761088135 0.8391308737708861 0.8319414085463169 1.5150658212873422 0.2277808834307571 0.07638935639347243 13.331287101623381 2.318977700228481 0.02605754574008479 12.113091018513723 0.0004549495490728603 3.342036761088135 0.6831244127410253 RQS(ph)MTVK ddPTM_KYSE-520_SHP099_60min_R1 6 RQSMTVK 7 1 P11274;P11274-2;H0Y554 P11274 BCR Breakpoint cluster region protein 1 RQS(0.998)MT(0.002)VK;RQS(0.987)MT(0.013)VK;RQS(0.823)MT(0.177)VK;RQS(0.942)MT(0.058)VK;RQS(0.931)MT(0.069)VK;RQS(0.963)MT(0.037)VK 130.53 0.0021484 15134580000.0 16422900.0 13560800.0 13325800.0 12757850.0 12200600.0 13082800.0 13216900.0 14259300.0 14764500.0 13867100.0 True False 15511888.998760512 12909318.812824206 14184802.390033856 13970352.228212534 13160717.808081912 13001145.392381761 14552993.236513527 14209837.816445647 12083638.982756656 13744248.28244056 1.1286094866736556 0.9392524456442594 1.0320537070154752 1.0164508048112635 0.9575436602739374 0.9459335370848783 1.0588424290258354 1.0338752272541465 0.8791778738597532 1.0 23.712324667544614 -4.248473423467342 24.64334824580899 0.988565263856485 1.1286095961978702 0.40670355002001046 0.05193133498687182 1826.620718703336 3471639.135696547 0.012755387792457194 0.22630839944702458 5.643214737875403e-05 4.248473423467342 0.14004433234138514 RQS(ph)PEPSPVTLGR ddPTM_KYSE-520_SHP099_60min_R1 4 RQSPEPSPVTLGR 13 1 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 RQS(1)PEPSPVTLGR;RQS(1)PEPSPVTLGR;RQS(1)PEPSPVTLGR;RQS(0.933)PEPS(0.01)PVT(0.057)LGR 174.59 2.8840999999999997e-07 3337040000.0 2367390.0 2167540.0 2031390.0 1705340.0 1770260.0 1881640.0 1990270.0 2347770.0 2413600.0 2201940.0 True False 2236066.157425038 2063408.124856131 2162336.6497389167 1867415.0008708343 1909569.390598418 1869895.986801081 2191465.914763352 2339626.133843637 1975351.0819046681 2182432.5246833987 1.0245751619511902 0.945462506409203 0.9907919833867957 0.8556576112893739 0.8749729345586231 0.8567944097480601 1.0041391383136868 1.0720267900071927 0.9051143893629557 1.0 21.057505619371568 -6.801581151731987 24.722709257674467 1.0013224612073943 0.92325674281974 0.2240367131439014 0.06395507933565432 209.0596920115804 128754.69448020738 0.02800309322206074 0.01888000082361668 1.5791335052263332e-07 6.801581151731987 -0.0780657183876543 RQS(ph)PLPPQK ddPTM_KYSE-520_SHP099_60min_R1 26 RQSPLPPQK 9 1 Q01105;B2REB7 Q01105 SET Protein SET 1 RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK;RQS(1)PLPPQK 147.3 0.00033408 124086540000.0 83433000.0 72250450.0 65532980.0 59356180.0 66091240.0 69956110.0 62818560.0 67843880.0 82511970.0 66777980.0 True False 78804805.17043798 68779429.93186356 69757340.74727534 64997373.50111369 71292244.58028406 69519487.96858859 69168873.09486476 67608545.41516067 67529876.20549616 66186379.04968237 1.1906498935571572 1.0391780139571427 1.0539531207004458 0.9820354948307995 1.0771437507824533 1.0503594390078999 1.0450620518603018 1.0214872967202324 1.0202986955186852 1.0 25.980031009652166 -4.258706429432948 5.084720854306211 1.0338624205395024 1.1982742225530114 0.7675323153304952 0.02616582144796443 0.07819495509277809 6.553104964052916 0.006427317104351973 0.0452368720331129 5.5118015242180066e-05 4.258706429432948 0.16441180201350902 RQS(ph)PLPPQKK ddPTM_KYSE-520_SHP099_60min_R1 4 RQSPLPPQKK 10 2 Q01105;B2REB7 Q01105 SET Protein SET 1 RQS(1)PLPPQKK;RQS(1)PLPPQKK;RQS(1)PLPPQKK;RQS(1)PLPPQKK 71.548 0.013628 17260300000.0 7057800.0 6618650.0 6556320.0 6329500.0 5787660.0 6294670.0 6238460.0 6357190.0 7701930.0 5784760.0 True False 6666289.764624511 6300680.119203801 6978950.877682906 6931053.776966432 6243115.914719216 6255382.629640719 6869104.418302332 6335138.391669303 6303453.661855321 5733511.5268751765 1.1626888222648621 1.098921679963507 1.2172210424571182 1.208867156624333 1.0888817237839894 1.0910212005887372 1.198062371742726 1.1049316569739278 1.0994054223678817 1.0 22.450987567070808 -8.780577843338644 0.417425318765291 0.980749199234165 1.160208346195216 0.5010512723225626 0.04582056802075544 2.9422138801248185 0.7987411630297674 0.1472186361345151 0.032736513094575606 1.65738023987939e-09 8.780577843338644 0.17945914696105092 RQS(ph)PS(ph)PSTRPIR ddPTM_KYSE-520_SHP099_60min_R1 6 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RQS(1)PS(0.939)PS(0.048)T(0.013)RPIR;RQS(0.981)PS(0.693)PS(0.299)T(0.027)RPIR;RQS(0.999)PS(0.527)PS(0.257)T(0.217)RPIR;RQS(1)PS(0.851)PS(0.078)T(0.072)RPIR;RQS(0.997)PS(0.767)PS(0.113)T(0.123)RPIR;RQS(0.999)PS(0.755)PS(0.214)T(0.031)RPIR 131.08 0.002747 19554870000.0 1822740.0 1742983.0 1768022.0 1491817.0 1609987.0 1744139.0 1598928.0 1628537.0 2053104.0 1568648.0 True False 1721628.9786578927 1659247.4804091777 1881991.527055219 1633598.8391488628 1736683.8173270468 1733253.1815454876 1760563.2462734878 1622887.9852503922 1680312.068140038 1554750.999109678 1.1073342159894264 1.0672110719718715 1.2104777730536491 1.0507141272681841 1.1170173348153833 1.1148107848382334 1.1323763401867357 1.0438250151823234 1.0807596001560777 1.0 20.56825211359355 -7.981365461044829 0.8830392177324937 1.0019801597195699 1.11426493117291 0.3848899675170805 0.043154962648485985 0.6270875946782106 1.1093658887265536 0.03970785154472804 0.014085268777585959 1.0438414515675602e-08 7.981365461044829 0.11228477145334015 RQS(ph)PS(ph)PSTRPIRR ddPTM_KYSE-520_SHP099_60min_R1 2 RQSPSPSTRPIRR 13 3 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RQS(1)PS(0.447)PS(0.299)T(0.254)RPIRR;RQS(1)PS(0.387)PS(0.283)T(0.33)RPIRR 82.007 0.016291 2356000000.0 404550.0 385500.0 110015.0 496020.0 197435.0 376730.0 253700.0 399890.0 171708.0 130861.0 True False 382108.80504956894 366980.00135270326 117106.74293022379 543161.5916661486 212972.0112485163 374378.6883291019 279346.4718733958 398502.87492502754 140530.155606433 129701.67334831742 2.946059177073261 2.8294160890828937 0.902893076912974 4.1877762841769455 1.6420143684389799 2.886459971288864 2.153761510255948 3.072457468261316 1.083487606432304 1.0 16.984837567100797 -7.775452731722841 24.445385314966316 1.0417410999072696 2.548827777410736 0.3498398614338897 0.8367695642277295 217.06213647013152 378635.91942183604 0.7326754840277762 0.1932645778973735 1.6770548551754803e-08 7.775452731722841 1.5070866775034664 RQS(ph)PSPS(ph)TR ddPTM_KYSE-520_SHP099_60min_R1 2 RQSPSPSTR 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RQS(0.603)PS(0.4)PS(0.592)T(0.404)R;RQS(0.757)PS(0.48)PS(0.744)T(0.019)R 82.505 0.016723 109127000.0 267530.0 223500.0 203077.0 245460.0 238360.0 251800.0 254860.0 257020.0 264570.0 260800.0 True False 252689.57759216684 212762.7245196606 216167.6683546885 268788.4445997603 257117.57591711916 250228.4227995326 280623.73599390424 256128.4576089191 216530.75726695318 258489.51489932972 0.9775621950877903 0.8231000185927166 0.8362724826145319 1.0398427367719016 0.9946924772451801 0.9680409006028177 1.0856290867472702 0.9908659456019709 0.8376771388629917 1.0 17.979746236178066 -5.25803857955992 24.997904335765256 0.9912280532850914 0.8733904082077857 0.3309190051051113 0.07087889746551475 326.56250581644343 2400419.4779324033 0.019671126191127614 0.03238804204184163 5.520283989186416e-06 5.25803857955992 -0.11783764507730576 RQS(ph)PSPS(ph)TRPIR ddPTM_KYSE-520_SHP099_60min_R1 3 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RQS(0.949)PS(0.276)PS(0.616)T(0.158)RPIR;RQS(0.995)PS(0.178)PS(0.529)T(0.298)RPIR;RQS(0.957)PS(0.089)PS(0.827)T(0.127)RPIR 89.866 0.0021815000000000003 21097080000.0 1186250.0 1136960.0 1149220.0 1146860.0 1126580.0 995740.0 1036480.0 1143570.0 1316760.0 1027560.0 True False 1120446.3477692509 1082338.7349882484 1223300.5600170125 1255857.2295839665 1215235.4366366318 989525.2173090021 1141257.5134699908 1139603.222581245 1077669.5768183572 1018456.6178295835 1.1001414573327788 1.0627244362109436 1.2011317307004874 1.2330984036024075 1.193212764650104 0.9715928984955328 1.1205754800848624 1.1189511684943785 1.0581398931993407 1.0 19.957953097909677 -6.235154356862308 24.994350245469878 1.0654565387016577 1.159326721844832 0.3968840611572034 0.06342029502754756 950.1411896052683 903486.6766249142 0.022590068465981814 0.022582784391660733 5.818963635179495e-07 6.235154356862308 0.0938701831431743 RQS(ph)PSPST(ph)RPIR ddPTM_KYSE-520_SHP099_60min_R1 1 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RQS(0.984)PS(0.017)PS(0.166)T(0.834)RPIR 83.37 0.015475999999999998 34841000000.0 1768000.0 1541000.0 1495400.0 1349600.0 1512400.0 1566300.0 1367800.0 1496600.0 1933800.0 1482500.0 True False 1669925.5155793785 1466968.046911842 1591795.8767245978 1477865.5782279656 1631417.2756211213 1556524.140710514 1506070.5724415851 1491408.6439090653 1582670.6671309434 1469366.2033675483 1.1364937561189177 0.9983678973626792 1.0833214164559255 1.0057843816204144 1.1102863750930014 1.0593166884764424 1.0249797286679907 1.0150013253952619 1.0771111132838904 1.0 20.486762566267718 -8.021042207844772 0.0075491075729170135 2.5410577325990307e-08 2.070433905794531 0.17371221145605964 0.042643993311989044 5132.173730965392 25.179587314982665 3487.0720868772455 3415.939766900522 9.527035689755546e-09 8.021042207844772 2.0704338803839537 RQS(ph)PSPSTR ddPTM_KYSE-520_SHP099_60min_R1 3 RQSPSPSTR 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RQS(0.934)PS(0.009)PS(0.029)T(0.029)R;RQS(0.889)PS(0.047)PS(0.007)T(0.058)R;RQS(0.432)PS(0.275)PS(0.146)T(0.146)R 96.229 0.003312 510248000.0 576890.0 499704.0 497936.0 519702.0 524353.0 553539.0 550347.0 552260.0 553138.0 550255.0 True False 544888.7616982966 475697.4697690042 530033.7512857697 569094.3218258957 565616.5979395411 550084.1577761333 605981.44562912 550344.338958453 452702.0826742552 545380.1687919124 0.9990989641322965 0.8722309628946275 0.9718610642918372 1.0434818762965166 1.0371051796629405 1.008625155906642 1.1111174925400154 1.0091022197919974 0.830067003860901 1.0 19.05690271611697 -5.000030051726591 24.999985716478587 1.0115303788081669 0.9322602135419678 0.1266868661752032 0.07262212729240876 1.926074485368571 1607468.4570121584 0.01926489231998633 0.039420949323297504 9.99930805736367e-06 5.000030051726591 -0.07927016526619912 RQS(ph)PSPSTRPIR ddPTM_KYSE-520_SHP099_60min_R1 4 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RQS(0.444)PS(0.444)PS(0.062)T(0.051)RPIR;RQS(0.392)PS(0.107)PS(0.25)T(0.25)RPIR;RQS(0.792)PS(0.042)PS(0.023)T(0.143)RPIR;RQS(0.56)PS(0.05)PS(0.195)T(0.195)RPIR 106.6 0.00043449 105072000000.0 1798250.0 1611860.0 1612710.0 1566040.0 1494477.0 1547670.0 1591120.0 1541410.0 1897360.0 1521220.0 True False 1698497.4877775004 1534423.8261488138 1716667.867027234 1714875.9707529056 1612083.8374890422 1538010.4174509645 1751965.9374347536 1536063.2084777972 1552847.2525532967 1507743.1742912505 1.1265164497102886 1.0176957537016245 1.138567825275809 1.1373793627412856 1.0692032071356181 1.0200745350241376 1.1619790209020882 1.0187830624402323 1.0299149610033873 1.0 20.523959273307753 -7.376154195605721 14.014384024019384 1.0181001866956234 1.0921965267361258 0.37561757815339136 0.04689044851210438 1.1732832463427827 138.4079258786478 0.025413332098156292 0.012205028650194542 4.205772765399495e-08 7.376154195605721 0.07409634004050236 RQS(ph)S(ph)SSAGDS(ph)DGEREDSAAER ddPTM_KYSE-520_SHP099_60min_R1 1 RQSSSSAGDSDGEREDSAAER 21 2 I3L3Z2;Q9BRA0 I3L3Z2 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit 3 RQS(0.689)S(0.42)S(0.409)S(0.485)AGDS(0.997)DGEREDSAAER 54.855 0.031882 32155000.0 25874.0 27112.0 21585.0 26098.0 26034.0 24760.0 25651.0 28205.0 33084.0 24521.0 True False 24438.717641459745 25809.498824058326 22976.403637221094 28578.34607335017 28082.727686802624 24605.463655744345 28244.05340963525 28107.163438096482 27076.779579770475 24303.763017049314 1.005552828354842 1.0619548423819276 0.9453846147653322 1.175881531320981 1.1554888708839999 1.0124137417931283 1.1621267615974442 1.1564943016593376 1.1140982390577074 1.0 14.56889208703193 -5.263427581204079 24.999158821330273 1.1173347500985 1.0100631707172996 0.3693694920953676 0.06332930281270374 184.67690338411984 2322088.104054992 0.017239400916546795 0.027068764388684847 5.4522080391812465e-06 5.263427581204079 -0.10727157938120047 RQS(ph)S(ph)SYDDPWK ddPTM_KYSE-520_SHP099_60min_R1 2 RQSSSYDDPWK 11 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;H7C1V2;H0YCF0;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 2 RQS(0.983)S(0.573)S(0.39)Y(0.055)DDPWK;RQS(0.648)S(0.694)S(0.285)Y(0.373)DDPWK 113.54 0.00031425 293140000.0 853160.0 831310.0 816280.0 861360.0 1011550.0 1047390.0 1050620.0 1159500.0 1376930.0 1061990.0 True False 805833.5140677053 791372.6197782506 868898.7148941787 943223.3954226726 1091153.2300678045 1040852.8505004067 1156826.9226630935 1155477.9651293335 1126914.2215806225 1052581.5948157173 0.7655781917873912 0.7518396898406737 0.8254929776216567 0.8961047771197341 1.0366447935647594 0.9888571637837121 1.099037764255822 1.0977561937434703 1.0706193487811453 1.0 20.00550064287548 -5.498506755967454 1.1316119072823194 1.0677929440099865 0.7471055305445276 0.9218559574684969 0.03554634220188125 0.12274891604452416 0.3190328273824486 0.01364492352193528 0.027605020724781278 3.173169301027812e-06 5.498506755967454 -0.3206874134654589 RQS(ph)S(ph)TPSAPELGQQPDVNISEWK ddPTM_KYSE-520_SHP099_60min_R1 6 RQSSTPSAPELGQQPDVNISEWK 23 1 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 2 RQS(0.951)S(0.835)T(0.213)PS(0.002)APELGQQPDVNISEWK;RQS(0.728)S(0.673)T(0.461)PS(0.138)APELGQQPDVNISEWK;RQS(0.989)S(0.961)T(0.05)PSAPELGQQPDVNISEWK;RQS(0.959)S(0.852)T(0.189)PS(0.001)APELGQQPDVNISEWK;RQS(0.992)S(0.981)T(0.028)PSAPELGQQPDVNISEWK;RQS(0.992)S(0.976)T(0.031)PSAPELGQQPDVNISEWK 212.28 5.8435e-21 3356070000.0 1870590.0 1969370.0 1703920.0 1685120.0 1694120.0 1737540.0 1700740.0 1750300.0 2105070.0 1770380.0 True False 1766824.6437712822 1874758.5091153625 1813757.4095683936 1845273.2981501962 1827437.605775757 1726695.3683522618 1872667.396822855 1744228.617823091 1722842.3524962927 1754695.8105347964 1.0069122141647955 1.0684236537522553 1.0336591668362145 1.0516200512200422 1.0414555017480724 0.9840425662303254 1.0672319302182087 0.9940347536884384 0.9818467350025784 1.0 20.742789519700214 -7.382429910406118 7.789555325976187 0.9900652355461781 1.03607822647555 0.4056908961711547 0.024537757977951918 0.2694178777293002 16.022874105374353 0.013091650828344147 0.006237630630187762 4.145434806736909e-08 7.382429910406118 0.04601299092937183 RQS(ph)SGSATNVASTPDNR ddPTM_KYSE-520_SHP099_60min_R1 7 RQSSGSATNVASTPDNR 17 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RQS(0.435)S(0.435)GS(0.122)AT(0.006)NVASTPDNR;RQS(0.969)S(0.028)GS(0.003)ATNVASTPDNR;RQS(0.979)S(0.021)GS(0.001)ATNVASTPDNR;RQS(0.499)S(0.499)GS(0.002)ATNVASTPDNR;RQS(0.801)S(0.161)GS(0.033)AT(0.001)NVAS(0.001)T(0.003)PDNR;RQS(0.497)S(0.497)GS(0.007)ATNVASTPDNR;RQS(0.905)S(0.073)GS(0.021)AT(0.001)NVASTPDNR 257.57 2.2594e-29 4395360000.0 4495330.0 3899300.0 3629770.0 3265600.0 3201380.0 3824230.0 3541190.0 3628550.0 4312350.0 3937880.0 True False 4245965.08368181 3711971.7750313794 3863750.7820373415 3575961.6421615547 3453310.392639477 3800361.562043913 3899168.0438839174 3615963.4069599407 3529335.94549701 3902993.4468242764 1.087873997620108 0.951057649879396 0.9899454955993162 0.9162100041626215 0.884785086034236 0.973704315372635 0.9990198797429518 0.9264590003096517 0.9042638665890413 1.0 21.896149609799718 -3.2028140716734654 1.327072505146992 0.9443698249246283 2.7359595448138077 0.5237984703212067 0.039239746624308715 16.03942281593294 2.665878001760322 0.011633141588249712 73.11628339721227 0.0006268821853960134 3.2028140716734654 1.7915897198891795 RQS(ph)SPSCGPVAETSSIGNGDGISK ddPTM_KYSE-520_SHP099_60min_R1 5 RQSSPSCGPVAETSSIGNGDGISK 24 1 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 RQS(0.802)S(0.194)PS(0.003)CGPVAETSSIGNGDGISK;RQS(0.709)S(0.279)PS(0.012)CGPVAETSSIGNGDGISK;RQS(0.817)S(0.173)PS(0.009)CGPVAETSSIGNGDGISK;RQS(0.735)S(0.265)PSCGPVAETSSIGNGDGISK;RQS(0.88)S(0.12)PSCGPVAETSSIGNGDGISK 207.49 3.667e-17 14407500000.0 2426710.0 2106520.0 1832150.0 1548230.0 1499780.0 1808490.0 1568760.0 1911070.0 2203960.0 2034730.0 True False 2292095.558773549 2005319.617249016 1950253.3205436482 1695373.3137076772 1617804.1534191002 1797202.5430846985 1727345.570422182 1904440.9442170903 1803776.4213103282 2016703.8751959878 1.136555340109513 0.9943550175675319 0.9670499196884412 0.8406654712967798 0.8022021345408872 0.8911583724259182 0.8565191903815402 0.9443334579956676 0.8944180866092862 1.0 20.943567829204557 -4.445368036836992 1.4506371161087093 0.8848055761048057 1.18121938221168 0.6522659781811169 0.054589366752942514 0.5007867226191332 1.2630185334488193 0.016112195514360245 0.19514356716150477 3.586179000712483e-05 4.445368036836992 0.2964138061068744 RQS(ph)SS(ph)RFNLSK ddPTM_KYSE-520_SHP099_60min_R1 1 RQSSSRFNLSK 11 2 E9PFR3;Q14738;H0Y8C4 E9PFR3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform 2 RQS(0.842)S(0.469)S(0.689)RFNLSK 113.25 0.0014542 1112100000.0 1204800.0 1217700.0 1228100.0 1093600.0 1130200.0 1021900.0 955960.0 1106500.0 1455400.0 1098400.0 True False 1137967.3422907428 1159199.8641950376 1307265.2910294768 1197535.4151971703 1219140.3100416497 1015521.9430454407 1052597.7660705207 1102661.8097590408 1191136.0476483465 1088669.0305422703 1.0452831029132121 1.0647862956270886 1.200792209895346 1.0999995238228402 1.119844760748261 0.9328105370459608 0.9668666385652742 1.0128531067057183 1.0941213667619782 1.0 20.05413399209409 -6.241530087730951 24.88056056899498 0.9999796669978311 1.1087608819220782 0.4836892410866944 0.054100948005433934 702.7540411566532 878228.9867362444 0.01890006528536489 0.01887469224296868 5.734161391515729e-07 6.241530087730951 0.10878121492424708 RQS(ph)SSRFNLS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 RQSSSRFNLSK 11 2 E9PFR3;Q14738;H0Y8C4 E9PFR3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform 2 RQS(0.642)S(0.38)S(0.274)RFNLS(0.703)K 105.76 0.0042562 892000000.0 1621600.0 1549500.0 1496000.0 1363600.0 1387600.0 1381000.0 1257400.0 1442700.0 1887800.0 1339800.0 True False 1531646.6154205448 1475059.6941530814 1592434.5536846318 1493196.1340187103 1496796.2256359868 1372380.6667440594 1384510.2630414164 1437695.6104287128 1545023.1075653103 1327930.4143486286 1.153408792261033 1.110795925911993 1.1991852407912102 1.1244535992882936 1.1271646537067905 1.0334733295624037 1.0426075403360207 1.0826588463477025 1.1634819798318794 1.0 20.34074811849062 -6.082933174858827 4.523490104708634 1.0684121617314104 1.1460991214988587 0.43259317532390584 0.0452299963342789 0.23891251462626018 8.735679994082261 0.015299686346381135 0.015559911434911528 8.26165062289748e-07 6.082933174858827 0.07768695976744833 RQS(ph)SSYDDPWK ddPTM_KYSE-520_SHP099_60min_R1 13 RQSSSYDDPWK 11 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;H7C1V2;H0YCF0;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 RQS(0.99)S(0.009)S(0.001)YDDPWK;RQS(0.685)S(0.308)S(0.006)Y(0.001)DDPWK;RQS(0.816)S(0.152)S(0.029)Y(0.003)DDPWK;RQS(0.772)S(0.209)S(0.016)Y(0.004)DDPWK;RQS(0.861)S(0.062)S(0.076)YDDPWK;RQS(0.904)S(0.09)S(0.005)Y(0.001)DDPWK;RQS(0.708)S(0.249)S(0.043)YDDPWK;RQS(0.861)S(0.102)S(0.037)YDDPWK;RQS(0.886)S(0.084)S(0.03)YDDPWK;RQS(0.871)S(0.078)S(0.051)YDDPWK;RQS(0.938)S(0.057)S(0.005)YDDPWK;RQS(0.636)S(0.287)S(0.077)YDDPWK;RQS(0.704)S(0.055)S(0.241)YDDPWK 181.76 2.539e-06 30697040000.0 19563360.0 18191750.0 16973390.0 17097850.0 17578190.0 17405140.0 17300670.0 17117230.0 20835490.0 16813520.0 True False 18478141.422208715 17317791.02362654 18067521.877784204 18722824.523343947 18961493.546780255 17296508.065151125 19049590.561867945 17057854.32432152 17052290.235960346 16664565.29352063 1.1088282890519336 1.0391984860451111 1.0841880096811802 1.1235111263672501 1.1378330735187372 1.0379213475119091 1.1431195609569629 1.0236003174324508 1.0232664300334595 1.0 23.990280348472673 -7.384454311756834 7.162641325697711 1.0156808815304215 1.0939998248220508 0.5333944348596843 0.03462159266425608 0.21435763588563286 11.564309886416842 0.019158606069870424 0.009094674848608824 4.126156424396457e-08 7.384454311756834 0.07831894329162936 RQS(ph)STPSAPELGQQPDVNISEWK ddPTM_KYSE-520_SHP099_60min_R1 1 RQSSTPSAPELGQQPDVNISEWK 23 1 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L213 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 RQS(0.448)S(0.448)T(0.102)PS(0.001)APELGQQPDVNISEWK 136.16 7.739499999999999e-07 1697200000.0 839940.0 846440.0 673400.0 557020.0 713280.0 570190.0 622070.0 562530.0 852040.0 583620.0 True False 793346.8538211212 805775.7518676573 716808.4414780946 609959.0133258301 769411.0779919559 566631.2327087584 684954.9064181447 560578.7147254893 697331.0141804983 578449.5808494888 1.3715056248394932 1.392992195939231 1.2391891449301722 1.0544722193938973 1.3301264335986351 0.9795689226304315 1.184122055049718 0.9691055768460319 1.2055173644631652 1.0 19.14183169024599 -3.6085784742543026 0.3732767752794193 1.0500549112504958 1.9173017960843504 0.5102781827685925 0.10864221299934174 7.586645208491414 0.5781190097753323 0.08718689476304636 3.247516568497748 0.0002462756793518486 3.6085784742543026 0.8672468848338546 RQS(ph)TDLPTGWEEAYTFEGAR ddPTM_KYSE-520_SHP099_60min_R1 4 RQSTDLPTGWEEAYTFEGAR 20 1 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;Q9HAU0-5;Q9HAU0-3;Q9HAU0-7 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 RQS(0.96)T(0.04)DLPTGWEEAYTFEGAR;RQS(0.939)T(0.061)DLPTGWEEAYTFEGAR;RQS(0.863)T(0.137)DLPTGWEEAYTFEGAR;RQS(0.993)T(0.007)DLPTGWEEAYTFEGAR 241.63 1.7703e-26 3324130000.0 1103600.0 1147080.0 1178180.0 905700.0 933170.0 982100.0 969100.0 899980.0 1185840.0 1037600.0 True False 1042381.1080279418 1091972.5549978178 1254127.3679546502 991777.455691366 1006605.1699889987 975970.3496085034 1067066.0855045617 896858.179436911 970521.3485937308 1028407.6712405839 1.0135874490030803 1.0618090330661911 1.2194846489639437 0.9643816196887852 0.9787997485226024 0.9490111527767733 1.0375905541596588 0.8720842954769262 0.943712669337614 1.0 19.971980846198687 -5.395902443286678 12.686566990697608 0.9611597224628176 1.0946231711798866 0.4916683442833678 0.0626754262615931 0.5494333428045931 53.40287222396396 0.017779886562555525 0.026372598669980613 4.018810763149294e-06 5.395902443286678 0.13346344871706906 RQS(ph)VS(ph)PPYKEPSAYQSSTR ddPTM_KYSE-520_SHP099_60min_R1 2 RQSVSPPYKEPSAYQSSTR 19 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 RQS(1)VS(0.989)PPY(0.011)KEPSAYQSSTR;RQS(1)VS(0.99)PPY(0.011)KEPSAYQSSTR 76.19800000000001 0.0050624 4641800000.0 566610.0 546050.0 419420.0 557640.0 499260.0 486400.0 502360.0 489580.0 542180.0 468450.0 True False 535179.0137909683 519816.9383622406 446456.4842957275 610637.937939421 538548.9215991809 483364.19717908057 553143.451361131 487881.76124883053 443733.7792455552 464299.89744858566 1.1526580486704319 1.119571512332291 0.9615692072065684 1.3151799974434415 1.1599160899207763 1.0410603143254107 1.1913495014768627 1.0507901550912064 0.9557050985450458 1.0 18.82469743668872 -7.514866526668169 4.684352149538375 0.9821624339463915 1.1314655901509647 0.3426305435007021 0.08769966403985249 0.22113829722785736 13.120339370490692 0.058195427868938686 0.02315947289425752 3.055860137726783e-08 7.514866526668169 0.14930315620457324 RQS(ph)VSGLHR ddPTM_KYSE-520_SHP099_60min_R1 4 RQSVSGLHR 9 1 Q8N1G4;J3KRP5 Q8N1G4 LRRC47 Leucine-rich repeat-containing protein 47 1 RQS(0.994)VS(0.006)GLHR;RQS(1)VSGLHR;RQS(0.998)VS(0.002)GLHR;RQS(0.997)VS(0.003)GLHR 184.43 4.276e-06 11028700000.0 1367760.0 1753180.0 1649570.0 2625630.0 1763030.0 1568340.0 1498150.0 1724420.0 1870930.0 1625460.0 True False 1291887.626238038 1668954.601223169 1755903.921605317 2875169.085775556 1901770.4307314896 1558551.4083138173 1649597.6225349924 1718438.3895026534 1531216.2743072154 1611059.6889887424 0.8018868792185796 1.0359359200842315 1.0899061863483734 1.7846446692364897 1.1804469094036023 0.9674076131171252 1.0239208601702647 1.0666509759059966 0.9504404366720611 1.0 20.619578515518135 -6.226615915425702 8.324380202365974 1.007268073825486 1.1997203260649407 0.12153694275954463 0.23415861291528237 0.7442108511267018 165.54889142770185 0.08427104337545464 0.08357420937219968 5.934499322192318e-07 6.226615915425702 0.19245225223945472 RQS(ph)VSPPYKEPS(ph)AYQSSTR ddPTM_KYSE-520_SHP099_60min_R1 1 RQSVSPPYKEPSAYQSSTR 19 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 RQS(0.725)VS(0.283)PPY(0.011)KEPS(0.51)AY(0.049)QS(0.084)S(0.258)T(0.079)R 70.112 0.010771 3640900000.0 1521700.0 1400700.0 1260200.0 1346900.0 1233700.0 1253500.0 1363300.0 1533400.0 1593500.0 1256200.0 True False 1437288.2675662553 1333408.2695064382 1341434.5083912918 1474908.9710397492 1330785.1712072042 1245676.4415377837 1501115.6685258166 1528080.99329825 1304160.5688660447 1245071.0453088116 1.1543825334158089 1.0709495450323612 1.0773959553919106 1.184598241680202 1.068842758990619 1.0004862342845842 1.2056465967799443 1.227304256295868 1.0474587564941544 1.0 20.24779663594713 -6.785709066161689 24.999943051923523 1.1390443475785954 1.0941704641996075 0.005539320432894512 0.07873274396830089 716.6630662536627 738219.008217092 0.03265335779993944 0.02202634175927424 1.6379133920389102e-07 6.785709066161689 -0.0448738833789879 RQS(ph)VSPPYKEPSAYQSS(ph)TR ddPTM_KYSE-520_SHP099_60min_R1 1 RQSVSPPYKEPSAYQSSTR 19 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 RQS(0.676)VS(0.326)PPY(0.016)KEPS(0.253)AY(0.076)QS(0.115)S(0.449)T(0.089)R 87.439 0.00095157 638930000.0 655590.0 664540.0 554120.0 582350.0 565920.0 554340.0 545540.0 604680.0 649900.0 543050.0 True False 619223.1158137356 632614.5009051248 589839.4618233476 637696.3689100882 610454.6843556637 550880.1584380179 600688.5071573204 602582.5062133736 531894.5426457749 538238.9994865074 1.1504612568106158 1.1753412545517026 1.0958690514549638 1.184782911529015 1.134170294122224 1.023486144563234 1.11602560894025 1.1195444900652898 0.9882125657063401 1.0 19.03788740337007 -7.121608706705881 0.3790404743708028 0.9900864965565819 1.168925660212255 0.5704202510579202 0.044244915283831426 0.9341438120787909 0.36798441517454245 0.0558059691497862 0.05507552476085477 7.557728618462566e-08 7.121608706705881 0.1788391636556732 RQS(ph)YS(ph)S(ph)TSR ddPTM_KYSE-520_SHP099_60min_R1 1 RQSYSSTSR 9 1 A0A087X2G0;H0YII6;P35398 A0A087X2G0 RORA Nuclear receptor ROR-alpha 3 RQS(0.797)Y(0.316)S(0.886)S(0.837)T(0.139)S(0.025)R 69.672 0.020646 297570000.0 710810.0 563260.0 781410.0 365640.0 372900.0 454810.0 384800.0 493150.0 740610.0 545060.0 True False 671379.9523353949 536200.1441295029 831780.9389002055 400390.3156663256 402245.1084892332 451971.36208679667 423699.3392860962 491439.3777520751 606133.8932587899 540231.1924502627 1.2427641382392163 0.9925382903151582 1.5396758841850562 0.7411462375031005 0.7445795691004394 0.8366258157675858 0.784292623616147 0.9096834551946392 1.1219898105283779 1.0 19.04321741656825 -5.280798374655648 24.996210182388637 0.8620889091107953 1.2317473655607554 0.5222572199135742 0.16617214542735392 630.8659417582421 814568.6916440134 0.04670275135839226 0.06939124475195842 5.238435795054062e-06 5.280798374655648 0.3696584564499601 RQS(ph)YSSTSR ddPTM_KYSE-520_SHP099_60min_R1 3 RQSYSSTSR 9 1 A0A087X2G0;H0YII6;P35398 A0A087X2G0 RORA Nuclear receptor ROR-alpha 1 RQS(0.999)YSSTSR;RQS(0.999)YSSTSR;RQS(1)YSSTSR 82.85 0.0032387 743470000.0 280838.0 304340.0 218230.0 193413.0 235063.0 322387.0 269291.0 211334.0 235680.0 695845.0 True False 265259.3563033264 289719.04957634676 232297.45498034588 211794.91336826107 253561.12077448284 320374.8631496142 296513.56230689184 210600.9316797265 192886.45300931862 689680.3546592178 0.38461202281801304 0.42007728307630515 0.33681901102595246 0.3070914111696169 0.3676502006495045 0.4645265897241869 0.429928966808695 0.30536020093509525 0.2796751447337179 1.0 19.39556834705808 -10.424630757850936 4.281243168307996 1.0021741348952224 0.36819635753394975 0.9173863791523595 0.057056613561795325 174404287.74279168 10766.724432723811 3737885.385842006 0.01511583076537537 3.7615708143705796e-11 10.424630757850936 -0.6339777773612727 RQSLPAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RQSLPASPR 9 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;H0YF21 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RQSLPAS(1)PR;RQSLPAS(1)PR 76.827 0.0097809 758880000.0 668570.0 709970.0 663860.0 545120.0 649900.0 573850.0 488610.0 539940.0 652110.0 588530.0 True False 631483.0893387478 675861.9755133038 706653.4778135563 596928.0409036963 701043.432574826 570268.3892911511 538003.467174063 538067.0741629439 533703.2623553411 583316.0820694121 1.082574454485217 1.1586547950393713 1.211441788655276 1.0233354766870022 1.2018242838218283 0.977631865159671 0.9223189342995739 0.9224279780767577 0.9149469365938598 1.0 19.15391832435045 -6.3984525622257085 4.869965242266258 0.9354651594054035 1.1342394569490497 0.7399529759073884 0.055984245667180556 0.11218694413630302 3.977793856052335 0.01955350357149724 0.017057839403337667 3.9952819919516927e-07 6.3984525622257085 0.19877429754364617 RQSPEPS(ph)PVTLGR ddPTM_KYSE-520_SHP099_60min_R1 4 RQSPEPSPVTLGR 13 1 Q9NRL2;Q9NRL2-2 Q9NRL2 BAZ1A Bromodomain adjacent to zinc finger domain protein 1A 1 RQS(0.001)PEPS(0.919)PVT(0.08)LGR;RQSPEPS(0.965)PVT(0.034)LGR;RQS(0.004)PEPS(0.941)PVT(0.054)LGR;RQS(0.001)PEPS(0.71)PVT(0.289)LGR 167.92 8.030500000000001e-07 5783520000.0 3442200.0 3318480.0 3059920.0 2655140.0 2940370.0 3149650.0 3026680.0 3364210.0 3865650.0 3357980.0 True False 3251254.304144423 3159055.23965997 3257167.3392451056 2907483.7073030514 3171760.3905832334 3129991.8660466555 3332646.351950208 3352540.340722517 3163745.405106388 3328230.909668905 0.9768716150971208 0.949169491360272 0.9786482451631131 0.8735823283343913 0.9529868800175173 0.9404371123871418 1.0013266634440765 1.0073040097617596 0.9505786981051503 1.0 21.666324099160676 -6.755925083968111 24.970055623650538 0.9904110126507876 0.9440669927165244 0.33453086693914147 0.030727769467550833 154.79752843211546 700964.3673566978 0.012088141308906852 0.009094520353919605 1.7541830732684782e-07 6.755925083968111 -0.04634401993426318 RQSPS(ph)PS(ph)TRPIR ddPTM_KYSE-520_SHP099_60min_R1 1 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RQS(0.044)PS(0.944)PS(0.869)T(0.144)RPIR 169.3 1.1945e-05 582140000.0 676810.0 664220.0 642630.0 573900.0 638230.0 619050.0 575920.0 595720.0 683240.0 553440.0 True False 639266.0001127146 632309.8741854544 684054.9580443542 628443.2834506739 688455.0699680429 615186.2793250621 634139.6140375473 593653.586362093 559180.839078781 548536.9521698047 1.1654018887588522 1.1527206538853503 1.2470535582671167 1.1456717381842554 1.255075099762696 1.1215038055168713 1.1560563267964552 1.0822490335679738 1.0194041383481516 1.0 19.065229285432554 -7.414596504113765 1.1390117340326702 0.9957144226672395 1.1881219198817148 0.7636460225544884 0.038685655080722275 0.2220696213370657 0.510262176941429 0.033296283842087805 0.012107391398424202 3.849492660081728e-08 7.414596504113765 0.19240749721447525 RQSPS(ph)PSTRPIR ddPTM_KYSE-520_SHP099_60min_R1 1 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RQS(0.136)PS(0.288)PS(0.288)T(0.288)RPIR 95.236 0.0015768 96426000000.0 403840.0 388570.0 324440.0 345290.0 332590.0 407380.0 308930.0 362510.0 368850.0 369920.0 True False 381438.19016491907 369902.513944539 345353.92152235383 378106.25778477575 358762.94082175975 404837.39031006146 340159.6592662519 361252.5374204696 301876.1379518301 366642.7965934048 1.0403537004108168 1.0088907170178203 0.9419356516237256 1.0312660204915565 0.9785080851311978 1.1041738555115084 0.9277685595538323 0.9852983360834638 0.8233521584404703 1.0 18.484015669560304 RQSPSPST(ph)RPIR ddPTM_KYSE-520_SHP099_60min_R1 2 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RQS(0.06)PS(0.064)PS(0.329)T(0.547)RPIR;RQS(0.127)PS(0.002)PS(0.119)T(0.752)RPIR 86.214 0.007569499999999999 51485800000.0 1476820.0 1305510.0 1139650.0 1197570.0 1206000.0 1104190.0 1266270.0 1219670.0 1557130.0 1078620.0 True False 1394897.8506323162 1242791.3399895388 1213113.662504473 1311386.692737451 1300905.3387986461 1097298.3406315167 1394276.9292042754 1215439.2494431192 1274394.4440529542 1069064.2659536616 1.3047839078111865 1.1625038639570497 1.1347434397896667 1.2266677827526347 1.2168635508906194 1.0264100817668513 1.3042030994839275 1.1369187879073699 1.192065327257129 1.0 20.027917151461914 -13.637611772306958 0.2676282030543709 5.9354824608067034e-12 1.1998890069152317 0.3516403908999163 0.07805968207216657 191.32977205033544 2.242101071469929 105.09479208653154 0.09551130869032413 2.3035000588974936e-14 13.637611772306958 1.1998890069092962 RQSPSPSTRPIR ddPTM_KYSE-520_SHP099_60min_R1 1 RQSPSPSTRPIR 12 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 0 119.25 8.7518e-05 591790000.0 32536.0 35386.0 28459.0 37021.0 33962.0 23816.0 34375.0 22738.0 34873.0 25799.0 False True 30731.163221092 33686.00344453113 30293.512676009967 40539.46470923049 36634.616182653095 23667.355509903362 37849.960467670346 22659.127185089084 28540.942276790458 25570.44093131829 1.2018237504638778 1.3173806245661186 1.1847082636305628 1.5854034280487654 1.4326939563167083 0.9255747905745317 1.4802232221702631 0.8861453443822521 1.1161693438705604 1.0 14.642189417874087 -7.2690228591845845 24.944566843386813 1.000868005247742 1.301122507722233 0.37521135643234993 0.17926884317388633 638.4440286772107 2100038.3942076815 0.09543607346941255 0.04725254913230933 5.382414513147406e-08 7.2690228591845845 0.3002545024744909 RQSS(ph)GSATNVASTPDNR ddPTM_KYSE-520_SHP099_60min_R1 1 RQSSGSATNVASTPDNR 17 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RQS(0.104)S(0.893)GS(0.003)ATNVASTPDNR 233.46 5.0799e-20 0.0 303850.0 286190.0 241200.0 194680.0 189600.0 243050.0 214320.0 224010.0 273720.0 269060.0 True False 286994.8347900416 272441.0028200522 256748.1379336451 213182.32866732343 204520.44132356855 241533.03479518025 235985.55716163217 223232.96159432686 224019.34791968236 266676.3377255123 1.0761916007915295 1.0216167101427402 0.9627706009594065 0.7994047409138723 0.7669238413423831 0.9057160333579659 0.8849137466576811 0.8370932475610141 0.8400420893370135 1.0 18.02473029422431 -4.957133709298901 2.7964666072937114 0.8545196448832133 1.0523601278720296 0.5975062613058446 0.061679291804918386 0.16995162453297652 2.680805222424345 0.0169635439265527 0.040545900096016364 1.1037387517678497e-05 4.957133709298901 0.1978404829888163 RQSS(ph)S(ph)RFNLSK ddPTM_KYSE-520_SHP099_60min_R1 1 RQSSSRFNLSK 11 2 E9PFR3;Q14738;H0Y8C4 E9PFR3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform 2 RQS(0.308)S(0.737)S(0.91)RFNLS(0.045)K 121.18 0.0011346 874050000.0 1751800.0 1751300.0 1793600.0 1551600.0 1504900.0 1452400.0 1352600.0 1515100.0 1993900.0 1503300.0 True False 1654624.161873279 1667164.9192451094 1909218.3258614666 1699063.5974944488 1623327.0682902848 1443335.0328595757 1489334.0081038806 1509844.4717269968 1631858.0221286535 1489981.9315497018 1.1104994811261475 1.1189161988770715 1.281370119619991 1.1403249673821783 1.0894944656153605 0.968692976939922 0.9995651467765468 1.0133307255321118 1.0952200074207539 1.0 20.50686340509772 -5.916481310705762 2.8951153444127216 1.0157380341843532 1.1692931404397018 0.6267845939086418 0.05347814648999644 0.1763838348051577 2.992434930333946 0.018592441778683688 0.0212676159933878 1.2120448464152114e-06 5.916481310705762 0.15355510625534863 RQSS(ph)S(ph)SAGDS(ph)DGEREDSAAER ddPTM_KYSE-520_SHP099_60min_R1 1 RQSSSSAGDSDGEREDSAAER 21 2 I3L3Z2;Q9BRA0 I3L3Z2 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit 3 RQS(0.442)S(0.529)S(0.545)S(0.487)AGDS(0.997)DGEREDSAAER 53.865 0.035041 64947000.0 49042.0 43648.0 43249.0 40456.0 42441.0 44760.0 42876.0 45894.0 56404.0 43678.0 True False 46321.542497196744 41551.084563016324 46036.89974084669 44300.92607646006 45780.86524374241 44480.63623712104 47210.3245094352 45734.80442574015 46162.455429131114 43291.04690096978 1.070002825368473 0.9598078017855818 1.0634277301299313 1.0233276681388748 1.057513470359546 1.0274788766109655 1.0905332138867176 1.056449490130386 1.0663279992911656 1.0 15.401781069001885 -5.517312718915488 1.2221143292114673 1.054542323752206 1.0208547995774933 0.04930896266567575 0.03611119180368273 1.0350552963634485 3.1480759250421535 0.012899188351915824 0.024536182075741157 3.038696188330954e-06 5.517312718915488 -0.03368752417471277 RQSSGS(ph)ATNVASTPDNR ddPTM_KYSE-520_SHP099_60min_R1 1 RQSSGSATNVASTPDNR 17 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RQS(0.093)S(0.227)GS(0.57)AT(0.017)NVAS(0.083)T(0.011)PDNR 154.31 2.9783e-06 1518800000.0 885400.0 678400.0 659520.0 572900.0 500870.0 644900.0 606430.0 648620.0 696010.0 756450.0 True False 836285.0969988593 645808.6457008399 702033.7144693105 627348.2437513344 540285.6194395345 640874.9398864907 667733.8625864526 646370.0886090457 569632.128984284 749748.441509194 1.11542092080308 0.8613671065469237 0.9363590180409886 0.8367449787405011 0.7206225308744562 0.854786624959769 0.8906105376389294 0.8621159482611868 0.7597643388729856 1.0 19.516047092625467 RQSSS(ph)S(ph)AGDS(ph)DGEREDSAAER ddPTM_KYSE-520_SHP099_60min_R1 1 RQSSSSAGDSDGEREDSAAER 21 2 I3L3Z2;Q9BRA0 I3L3Z2 NAA38 N-alpha-acetyltransferase 38, NatC auxiliary subunit 3 RQS(0.44)S(0.513)S(0.528)S(0.528)AGDS(0.931)DGEREDS(0.06)AAER 46.66 0.052397000000000006 185240000.0 91996.0 86558.0 70877.0 80181.0 74351.0 89741.0 95889.0 89655.0 114280.0 83428.0 True False 86892.7984905206 82399.6237537932 75445.84482720964 87801.37813270325 80202.00070067843 89180.89313126622 105582.39590645641 89344.00773063433 93529.6327643624 82688.89282600176 1.0508400284590207 0.9965017179173357 0.9124060348221942 1.0618279569598235 0.9699247137030076 1.0785111528694098 1.2768630985134648 1.0804837829747775 1.1311027342108968 1.0 16.33540593215004 -6.517333227596591 24.994306877117292 1.1358004888511908 0.9996836359483992 0.3751981699848268 0.07510954021113239 238.1624095704818 1073436.3422358644 0.027235017259937763 0.021761030421094167 3.0385526954194456e-07 6.517333227596591 -0.13611685290279163 RQSVS(ph)PPYKEPS(ph)AYQSSTR ddPTM_KYSE-520_SHP099_60min_R1 1 RQSVSPPYKEPSAYQSSTR 19 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 RQS(0.018)VS(0.982)PPY(0.007)KEPS(0.911)AY(0.004)QS(0.03)S(0.026)T(0.022)R 93.633 0.00069572 4203500000.0 1093800.0 1027200.0 1050800.0 1116000.0 1031700.0 1007300.0 1037400.0 1151000.0 1224700.0 1104000.0 True False 1033124.7335637582 977851.770141366 1118536.2493394464 1222064.3044623646 1112888.9204299855 1001013.067061036 1142270.5160483266 1147007.4496454194 1002325.3521746139 1094219.4188990025 0.9441659649974797 0.8936523637327467 1.0222229929577666 1.1168366082298182 1.0170619358499122 0.9148193221321641 1.043913584715644 1.0482426374771634 0.9160186109502133 1.0 20.06147063361252 -4.767577813487429 24.99992029457816 1.0135079075790383 0.9189091559490375 0.28112626162875254 0.05796403406128007 166.24616585696637 677079.104794762 0.01565107613243869 0.033966664547939666 1.707741712847481e-05 4.767577813487429 -0.09459875163000075 RQSVS(ph)PPYKEPSAYQSS(ph)TR ddPTM_KYSE-520_SHP099_60min_R1 1 RQSVSPPYKEPSAYQSSTR 19 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 RQS(0.103)VS(0.892)PPY(0.004)KEPS(0.103)AY(0.019)QS(0.101)S(0.416)T(0.362)R 89.197 0.00087897 712600000.0 525850.0 489920.0 404930.0 494720.0 427370.0 435480.0 433190.0 481690.0 574630.0 494870.0 True False 496680.05224401335 466383.5078150882 431032.4357109072 541738.0400570077 461001.58759732754 432762.0077868965 476981.07272698515 480019.1298172914 470291.6772434861 490485.8368030342 1.0126287345652074 0.950860295691627 0.8787867118046839 1.10449272824682 0.9398876644473901 0.8823129544527133 0.9724665564982008 0.9786605316598653 0.9588282514105346 1.0 18.90385195243273 -9.015635321107471 1.1360428651647656 1.0001933641002223 0.9627529398185809 0.02917775864374128 0.06093679194426356 54.84947033584862 55.98493172475747 0.10175848982497711 0.018068936580456815 9.646386947800723e-10 9.015635321107471 -0.037440424281641405 RQTEPVS(ph)PVLKR ddPTM_KYSE-520_SHP099_60min_R1 4 RQTEPVSPVLKR 12 2 Q8IYH5;Q8IYH5-4;Q8IYH5-2 Q8IYH5;Q8IYH5-2 ZZZ3 ZZ-type zinc finger-containing protein 3 1 RQTEPVS(1)PVLKR;RQTEPVS(1)PVLKR;RQTEPVS(1)PVLKR;RQTEPVS(1)PVLKR 134.88 2.804e-05 5791900000.0 5161460.0 4936510.0 4755520.0 4140670.0 4318920.0 4425390.0 3668700.0 4029520.0 5662140.0 4232400.0 True False 4875143.524684575 4699352.649747428 5062068.428301025 4534198.031862169 4658794.432706671 4397769.499494929 4039567.9990615933 4015542.5356170367 4634038.106933909 4194904.228757371 1.1621584805831686 1.1202526669219064 1.2067184737136487 1.080882371706804 1.1105842180541783 1.0483599290174144 0.9629702559999106 0.9572429587520129 1.1046826945812347 1.0 22.000206443094395 -6.09471484459516 1.392750583698952 1.0031155255246516 1.152344375267135 0.6350605801583347 0.04753890811937201 0.26259602602955673 1.038383609374477 0.020573122492823913 0.021333675361092357 8.040538863304246e-07 6.09471484459516 0.1492288497424834 RQTIEER ddPTM_KYSE-520_SHP099_60min_R1 4 RQTIEER 7 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 0 ;;; 144.12 0.0037670000000000004 1202425000.0 768189.0 653772.0 469479.0 418095.0 713682.0 637295.0 527093.0 569200.0 570347.0 562568.0 False True 725576.024823194 622363.8117882215 499742.36753295927 457830.6230951541 769844.7131048886 633317.4055124223 580376.7043719491 567225.578052279 466786.3620778425 557584.0851912805 1.3012853919140888 1.1161792962127284 0.8962636861515183 0.8210970062714296 1.3806791362073967 1.1358240350334987 1.0408774564877503 1.017291549592365 0.8371586895592804 1.0 19.088829858198235 -7.387235186647213 2.464268311103122 0.9220315015145766 1.0955850834224459 0.1648708284409386 0.16064263029771766 0.6215692197484228 7.088737818808139 0.12498600415804816 0.04774762266301493 4.099820223152836e-08 7.387235186647213 0.1735535819078693 RQVEEEILALK ddPTM_KYSE-520_SHP099_60min_R1 3 RQVEEEILALK 11 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;; 96.82 0.0050345 613803000.0 652560.0 629045.0 476202.0 432303.0 651564.0 647438.0 463025.0 529053.0 553070.0 550794.0 False True 616361.1959538914 598824.7339842047 506898.74287013913 473388.9471433638 702838.3799079611 643397.0992870679 509832.0856885256 527217.8386248987 452646.4297601156 545914.3936712473 1.1290436799236834 1.0969205811869842 0.9285315586959892 0.8671486823416518 1.287451637208918 1.1785677511821115 0.933904823904587 0.9657518554866905 0.8291527664549945 1.0 19.0583152103641 -6.8430391657089285 10.573863738958194 0.9288106088506857 1.0746250944632176 0.2742732891553382 0.11846016189744504 0.6474182697855035 79.45515450651854 0.053943009701615564 0.03636608462202066 1.4353599833407722e-07 6.8430391657089285 0.14581448561253196 RQYHES(ph)EEES(ph)EEEEAA ddPTM_KYSE-520_SHP099_60min_R1 4 RQYHESEEESEEEEAA 16 1 E9PNH5;Q8N9N8 E9PNH5 EIF1AD Probable RNA-binding protein EIF1AD 2 RQYHES(1)EEES(1)EEEEAA;RQYHES(1)EEES(1)EEEEAA;RQY(0.006)HES(0.994)EEES(1)EEEEAA;RQYHES(1)EEES(1)EEEEAA 195.56 1.7737e-12 2439470000.0 913633.0 930977.0 818963.0 765247.0 817227.0 816734.0 756270.0 812754.0 961033.0 838260.0 True False 862951.9562077683 886251.4674950342 871754.6653671307 837975.8448001004 881538.1155144282 811636.460153905 832721.1520839289 809934.7460722103 786533.6328704366 830833.6685564115 1.038657903340825 1.0667014362031237 1.049252935165495 1.0085963972260519 1.06102839699084 0.9768940413357802 1.002271794703261 0.9748458406596431 0.9466800186817814 1.0 19.664200155322266 -6.356969847528952 1.0999929630339678 0.9722237469391576 1.0489526480517337 0.650960016061259 0.02259113958028934 0.2952068775661513 0.7399497733205548 0.012338663179382472 0.010184386004732905 4.395721332695602e-07 6.356969847528952 0.07672890111257613 RRAEHEQEYK ddPTM_KYSE-520_SHP099_60min_R1 1 RRAEHEQEYK 10 2 Q9UKE5-2;Q9UKE5-6;Q9UKE5-5;Q9UKE5-8 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 0 73.067 0.028124 255720000.0 107710.0 127250.0 107340.0 99615.0 136420.0 136750.0 107630.0 113270.0 134260.0 74420.0 False True 101735.1115854383 121136.7189938558 114259.30815007235 109082.37964965812 147155.4778763775 135896.49252516302 118510.29076757406 112877.09280741667 109881.76841917497 73760.69669788389 1.3792590924423436 1.6422935847531261 1.5490540798179624 1.4788686188316273 1.9950391531564697 1.84239708420571 1.6066861631334617 1.5303148947975567 1.4897062167029038 1.0 16.1705646621854 -8.295011237302484 1.2383495405576368 1.0015886006234347 1.6488453600072777 0.5661155245197951 0.16611819423573373 0.8072463367093522 2.155354515213824 0.17100075276178794 0.05208878318023332 5.06977590138333e-09 8.295011237302484 0.647256759383843 RRAS(ph)PS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 2 RRASPSPPPK 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRAS(1)PS(1)PPPK;RRAS(1)PS(1)PPPK 66.215 0.022449 3739010000.0 3070420.0 2528830.0 2554700.0 2506240.0 2698530.0 2751840.0 2205150.0 2582400.0 3216000.0 2563010.0 True False 2900097.6818694775 2407341.2109487858 2719380.0496645262 2744432.29607147 2910888.9584646053 2734664.745816779 2428068.0821900596 2573442.2571366904 2632055.468762601 2540303.7253916054 1.1416342277821159 0.947658812167304 1.0704940604081958 1.0803559702879215 1.1458822539087807 1.0765109378388253 0.9558180220421304 1.0130451061476817 1.0361184146816347 1.0 21.276569569046046 -6.7362030422716215 24.673293939586603 1.0023324805650293 1.0741818460403127 0.32028073878243324 0.054019703385074135 259.01910439155455 253239.96072272738 0.021274660373146514 0.01647178595215363 1.8356799217520288e-07 6.7362030422716215 0.07184936547528342 RRAS(ph)PS(ph)PPPKR ddPTM_KYSE-520_SHP099_60min_R1 3 RRASPSPPPKR 11 3 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRAS(1)PS(1)PPPKR;RRAS(1)PS(1)PPPKR;RRAS(1)PS(1)PPPKR 73.38600000000001 0.043686 9238680000.0 2804410.0 2198880.0 557811.0 6138900.0 1236130.0 1920300.0 1589440.0 5291300.0 917400.0 766910.0 True False 2648843.786847268 2093242.5042138323 593768.3895891568 6722339.210272405 1333406.3983823978 1908314.6954008837 1750116.106639532 5272945.715298701 750823.2857720178 760115.7740469511 3.4847899192309795 2.7538469476421312 0.7811552001188713 8.84383595209692 1.7542148760881202 2.510557944667795 2.3024336112927846 6.937029720123924 0.987774904044605 1.0 19.53585964815455 -7.909917911438058 23.96387199152201 0.9852122181260005 3.5929833387106473 0.17562498772087576 2.3150598570360663 21.419223022881802 5682.83677684293 2.175872025171466 0.5618078865054728 1.2305013331484472e-08 7.909917911438058 2.6077711205846468 RRAS(ph)QEANLLTLAQK ddPTM_KYSE-520_SHP099_60min_R1 2 RRASQEANLLTLAQK 15 2 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2;H7C1L3 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 RRAS(1)QEANLLTLAQK;RRAS(1)QEANLLTLAQK 178.72 8.270100000000001e-09 1953180000.0 1186620.0 1366440.0 1498280.0 1125790.0 1379770.0 1261250.0 1265290.0 1313190.0 2100270.0 1333800.0 True False 1120795.8231316756 1300794.1713317463 1594861.526132762 1232784.7431188931 1488350.0491825927 1253378.0709130673 1393197.861240396 1308634.8503908503 1718913.9114981429 1321983.5696806964 0.8478137314538527 0.9839715115717603 1.2064155430600207 0.9325265240752215 1.1258461022644022 0.9481041214572739 1.0538692712927593 0.9899025074168886 1.300253612012227 1.0 20.334272815695133 -4.402022934879564 3.9078747744092612 1.0631224680866342 0.8518611600175333 0.27341545484050855 0.11020541648809416 0.30005216071543345 7.287277107860957 0.026252397755786784 0.131380525913239 3.962571075584854e-05 4.402022934879564 -0.21126130806910093 RRAS(ph)SASVPAVGASAEGTR ddPTM_KYSE-520_SHP099_60min_R1 3 RRASSASVPAVGASAEGTR 19 2 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 RRAS(0.848)S(0.142)AS(0.01)VPAVGASAEGTR;RRAS(0.774)S(0.21)AS(0.016)VPAVGASAEGTR;RRAS(0.882)S(0.112)AS(0.007)VPAVGASAEGTR 129.32 9.9388e-06 2691740000.0 368050.0 324210.0 330168.0 305099.0 258706.0 241559.0 248594.0 245670.0 330171.0 263299.0 True False 347633.5328105148 308634.464950869 351451.15756747837 334095.5172286404 279064.69036421424 240051.3406792386 273724.3075636378 244817.8281098093 270220.26933358726 260966.37570352235 1.3321008573359385 1.182659889109627 1.3467296567231082 1.280224382654562 1.0693511361833563 0.9198554412693962 1.0488872630649146 0.9381201982432441 1.0354600994289702 1.0 17.993504408700304 -5.851409227184196 3.617461060135482 0.9887469306054033 1.2842089894329312 0.8670397890685793 0.055068821023264006 0.07509606593856287 1.9127028160217276 0.016701946341664428 0.01956099124927578 1.4079614786414088e-06 5.851409227184196 0.29546205882752785 RRASS(ph)ASVPAVGASAEGTR ddPTM_KYSE-520_SHP099_60min_R1 2 RRASSASVPAVGASAEGTR 19 2 A0A2R8YFI4;V9GYZ0;Q9BZ23-3;Q9BZ23-4;Q9BZ23 A0A2R8YFI4 PANK2 Pantothenate kinase 2, mitochondrial 1 RRAS(0.393)S(0.567)AS(0.04)VPAVGASAEGTR;RRAS(0.26)S(0.698)AS(0.042)VPAVGASAEGTR 153.59 6.3137e-07 2157160000.0 295730.0 241090.0 246280.0 183397.0 172169.0 204298.0 164834.0 202582.0 246000.0 181816.0 True False 279325.2673768608 229507.67451653225 262155.6028619327 200826.99573968136 185717.72079239174 203022.9004015049 181497.0293448139 201879.29032499436 201332.60115534827 180205.25169070746 1.5500395507689002 1.273590377434972 1.4547611704007355 1.1144347562321197 1.030589947018556 1.1266203315204164 1.0071683685241513 1.1202741786431774 1.117240475881926 1.0 17.459281530414774 -5.313847810758817 5.1976935975991125 1.0738624100186633 1.4113131894264492 0.8138395412484966 0.0772340266002194 0.08053931668228376 4.9179414717946734 0.020586369237806094 0.03149483276807221 4.854585889699686e-06 5.313847810758817 0.3374507794077859 RRDDGLSAAAR ddPTM_KYSE-520_SHP099_60min_R1 1 RRDDGLSAAAR 11 2 F8WBN3;B9A031;C9JQZ0;B8ZZY7;F8WBV6;P84101-4;P84101;P84101-3;P84101-2 F8WBN3 SERF2 Small EDRK-rich factor 2 0 84.479 0.047563 110610000.0 18089.0 15342.0 14329.0 12636.0 12843.0 14702.0 14054.0 13062.0 14850.0 14354.0 False True 17085.567110472508 14604.947291188515 15252.670267210613 13836.92164084807 13853.671033325878 14610.239364570009 15474.715473822225 13016.69097069372 12153.614338036248 14226.834727243024 1.2009394526637247 1.0265774201496445 1.0721056763247 0.9725931246218593 0.9737704344591441 1.0269493984204934 1.087713168143412 0.9149393537107735 0.8542739527832739 1.0 13.796327097544145 -1.0000000000000173 0.5447735577955121 0.9700521918750331 10.18457939442535 0.5297100516114368 0.06244947721175857 115.9794305034881 1.0819442990938088 0.03322419235525876 1247.682587895967 0.09999999999999601 1.0000000000000173 9.214527202550318 RRDEDMLYS(ph)PELAQR ddPTM_KYSE-520_SHP099_60min_R1 9 RRDEDMLYSPELAQR 15 2 Q9Y2W2 Q9Y2W2 WBP11 WW domain-binding protein 11 1 RRDEDMLYS(1)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLYS(1)PELAQR;RRDEDMLYS(1)PELAQR 178.56 8.569e-09 10776990000.0 1907817.0 1600727.0 1802974.0 1029818.0 1972717.0 1614777.0 1208572.0 1557678.0 1968529.0 1715110.0 True False 1801986.5878710968 1523825.6721797886 1919196.588900398 1127691.593093928 2127958.6046756627 1604698.5777718865 1330746.2522860584 1552274.7785827764 1611093.7561777902 1699915.4597353905 1.060044826083054 0.8964126206705526 1.1289953143900113 0.6633809855870508 1.251802607293719 0.9439872839450937 0.7828308429486269 0.913148221397083 0.9477493406810793 1.0 20.69703156930288 -6.521331575780786 24.999489209379284 0.8979393940860354 0.9943243900660206 0.06796449653951442 0.15304881655931515 163.2428414128418 2637804.1429860024 0.05532351546126939 0.043469674192136834 3.010706527900889e-07 6.521331575780786 0.09638499597998518 RRDEELIYHK ddPTM_KYSE-520_SHP099_60min_R1 2 RRDEELIYHK 10 2 B4DKB2;A0A3B3ISF9;P42892-3;P42892-2;P42892-4;P42892 B4DKB2 ECE1 Endothelin-converting enzyme 1 0 ; 152.07 0.00019736 1120060000.0 409810.0 555870.0 407430.0 599770.0 748020.0 667110.0 696270.0 747660.0 849270.0 440940.0 False True 387077.0223640184 529165.1708221195 433693.5897110485 656771.9604725748 806884.9183483943 662946.3190381099 766655.7665403581 745066.5419651557 695063.9763544807 437033.61464612925 0.8856916479466661 1.2108111437848783 0.9923575102162675 1.5027950676159545 1.8462765593025094 1.516922947848999 1.7542260843279238 1.7048266243054186 1.5904130782188948 1.0 18.73738472399836 -5.338726879027611 4.430702748565728 1.6147316412900719 1.046789212918255 0.5211878995896576 0.2299699796834959 0.1540207429804841 5.635198197058426 0.061181091229340595 0.09400660129420572 4.584300955604252e-06 5.338726879027611 -0.5679424283718169 RRDS(ph)CLNSK ddPTM_KYSE-520_SHP099_60min_R1 6 RRDSCLNSK 9 2 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 RRDS(1)CLNSK;RRDS(1)CLNSK;RRDS(0.966)CLNS(0.034)K;RRDS(1)CLNSK;RRDS(1)CLNSK;RRDS(0.994)CLNS(0.006)K 125.84 0.00049704 4780800000.0 1517990.0 1492360.0 1396870.0 1345910.0 1569460.0 1364810.0 1402820.0 1554010.0 1639810.0 1661230.0 True False 1433784.0686619557 1420664.7855219701 1486914.4752710229 1473824.8817374043 1692967.5729941328 1356291.7145394352 1544630.7358038512 1548619.5020186608 1342061.840246142 1646512.7946173814 0.8708004416055206 0.8628325210507131 0.9030688860310702 0.8951189972865613 1.0282140403212272 0.823735909598329 0.9381225222503019 0.9405450762856239 0.8150934779453152 1.0 20.650982292104278 RRDS(ph)DGVDGFEAEGK ddPTM_KYSE-520_SHP099_60min_R1 9 RRDSDGVDGFEAEGK 15 2 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK;RRDS(1)DGVDGFEAEGK 196.61 2.239e-11 18756290000.0 15700200.0 14764620.0 13839290.0 15006000.0 14713580.0 14642200.0 15008150.0 16521860.0 18087500.0 15491410.0 True False 14829278.60842724 14055305.493053554 14731392.777046915 16432165.728281591 15871455.037181582 14550812.598551696 16525320.26742887 16464549.523891106 14803265.948769737 15354168.159534594 0.9658145237401604 0.9154065102722952 0.9594393277436558 1.0702087900527248 1.033690322541229 0.9476783403284513 1.0762758422159795 1.072317910864288 0.964120347970609 1.0 23.872127017969657 -5.092837826137639 6.05999023112947 1.0257173026431354 0.9397921594845442 0.4016909834456306 0.04313944438228524 0.21345936947608068 11.325925761732197 0.011795185028411448 0.02085128500066771 8.075365235299835e-06 5.092837826137639 -0.08592514315859123 RRDS(ph)DGVDGFEAEGKK ddPTM_KYSE-520_SHP099_60min_R1 6 RRDSDGVDGFEAEGKK 16 3 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 1 RRDS(1)DGVDGFEAEGKK;RRDS(1)DGVDGFEAEGKK;RRDS(1)DGVDGFEAEGKK;RRDS(1)DGVDGFEAEGKK;RRDS(1)DGVDGFEAEGKK;RRDS(1)DGVDGFEAEGKK 200.29 2.0445e-12 17797700000.0 5252030.0 5212090.0 5686880.0 5006170.0 5028260.0 4577380.0 4528560.0 5186240.0 6949530.0 4222540.0 True False 4960689.426237764 4961693.372893418 6053465.384129711 5481954.891640107 5423955.455114165 4548810.8735270975 4986351.039286494 5168250.143917515 5687670.535394827 4185131.5806864086 1.1853126551935447 1.1855525393253334 1.4464217593696003 1.3098644059217381 1.2960059559763175 1.0868979351853596 1.1914442695894107 1.2349074441931558 1.3590183309032269 1.0 21.996841551196468 -6.185901535079856 24.999731419365972 1.1901958113775817 1.2895174740741864 0.1893762148231919 0.11139527079878574 253.05500518197823 83749.17106341178 0.037581901367596024 0.037581900358736944 6.517761505131976e-07 6.185901535079856 0.0993216626966047 RRDS(ph)DYKR ddPTM_KYSE-520_SHP099_60min_R1 3 RRDSDYKR 8 3 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-3;P52756-4;P52756-2;P52756-5;F8WE23 P52756 RBM5 RNA-binding protein 5 1 RRDS(1)DYKR;RRDS(1)DYKR;RRDS(1)DYKR 138.63 0.00084821 5653900000.0 1678510.0 1665630.0 1042460.0 1198560.0 1854210.0 2108210.0 1727750.0 1886650.0 1897350.0 1584950.0 True False 1585399.7042732695 1585610.6346383987 1109658.6395949745 1312470.7820397955 2000125.7779882583 2095051.8793892087 1902407.831215051 1880105.6514974188 1552839.0683012197 1570908.5760724428 1.0092246795399495 1.009358952385831 0.7063801525416094 0.8354851466411949 1.273228632431899 1.3336561473406807 1.211023900557865 1.196826906501475 0.9884974160517984 1.0 20.5831677902587 -5.757319812666644 24.999704164083383 1.1875603086175386 0.8855060957032572 0.5175813982067331 0.13013780130360786 83.9039338834789 509169.8446696124 0.04104183301884657 0.05106033336982052 1.7485585830707028e-06 5.757319812666644 -0.30205421291428136 RRDS(ph)EEFGVK ddPTM_KYSE-520_SHP099_60min_R1 1 RRDSEEFGVK 10 2 O95049-5;O95049;O95049-4;O95049-3 O95049-5 TJP3 Tight junction protein ZO-3 1 RRDS(1)EEFGVK 134.61 0.00022125 759610000.0 357530.0 308770.0 295010.0 237140.0 250920.0 262850.0 276950.0 265250.0 368850.0 197860.0 True False 337697.0981816146 293936.2257267814 314026.81663268904 259677.71430125923 270665.9764604947 261209.4556507432 304946.80877152894 264329.9096598152 301876.1379518301 196107.11433275067 1.7220033007503075 1.4988554939829273 1.601302521334614 1.324162640324426 1.38019458081074 1.3319733786278052 1.5550012543354303 1.3478853664192183 1.539343123674813 1.0 17.581282348704264 -12.721059437582658 0.15368548510359428 3.177258633823653e-29 1.6134831374722685 0.5926869141870185 0.12140556952746041 64.89022726892848 0.8421226819853493 21.687857357078673 0.6283403018696795 1.9008181159788408e-13 12.721059437582658 1.6134831374722685 RRDS(ph)GDNSAPSGQER ddPTM_KYSE-520_SHP099_60min_R1 4 RRDSGDNSAPSGQER 15 2 Q8IXQ3 Q8IXQ3 C9orf40 Uncharacterized protein C9orf40 1 RRDS(0.815)GDNS(0.185)APSGQER;RRDS(0.998)GDNS(0.002)APSGQER;RRDS(0.99)GDNS(0.01)APSGQER;RRDS(0.998)GDNS(0.002)APSGQER 135.36 1.1203e-05 844620000.0 196749.0 190208.0 189134.0 174611.0 155998.0 183769.0 164903.0 176387.0 232598.0 146920.0 True False 185834.94076059212 181070.12217197122 201325.8802650997 191205.97694128854 168274.15509279552 182622.02950535063 181573.00453818915 175775.1546660351 190364.06651842137 145618.40310203048 1.2761775764728247 1.2434563098807008 1.3825579458115376 1.3130618992389045 1.155583027338178 1.2541136670575408 1.2469097357905123 1.2070943707772614 1.3072802782010935 1.0 17.151833167791285 -13.163005912571155 0.2545336983729265 1.704697810703506e-13 1.287498012860205 0.646551177117768 0.05871732118104902 76.96974798800224 1.127782847977583 40.008595219489216 0.08659821677933274 6.870590861919839e-14 13.163005912571155 1.2874980128600344 RRDS(ph)SHNELYYEEAEHER ddPTM_KYSE-520_SHP099_60min_R1 1 RRDSSHNELYYEEAEHER 18 2 Q8TAA9-2;Q8TAA9 Q8TAA9-2 VANGL1 Vang-like protein 1 1 RRDS(0.5)S(0.5)HNELYYEEAEHER 162.71 1.6434e-08 162030000.0 32765.0 42083.0 37797.0 52717.0 28717.0 49183.0 31247.0 34550.0 61903.0 26075.0 True False 30947.46013459182 40061.269512129176 40233.45509733825 57727.20783005603 30976.864522620825 48876.0306534925 34405.75170133223 34430.154114030636 50662.97564764031 25843.99578604304 1.1974719540584697 1.550119023535986 1.5567815221153296 2.2336796642426093 1.198609718832634 1.8911948081916894 1.3312860745749284 1.3322302943813558 1.9603383341751153 1.0 14.657541524466755 RRDS(ph)YYDR ddPTM_KYSE-520_SHP099_60min_R1 8 RRDSYYDR 8 2 Q13595;Q13595-3;Q13595-4 Q13595 TRA2A Transformer-2 protein homolog alpha 1 RRDS(1)YYDR;RRDS(1)YYDR;RRDS(1)YYDR;RRDS(1)YYDR;RRDS(1)YYDR;RRDS(1)YYDR;RRDS(1)YYDR;RRDS(1)YYDR 150.46 0.00031035 39983320000.0 2340770.0 2308250.0 2495810.0 2668760.0 2752390.0 2774150.0 3162120.0 3817490.0 4217880.0 2677720.0 True False 2210922.8218906913 2197358.205246112 2656693.9060371905 2922398.1480080504 2968987.4340431225 2756835.500831307 3481777.9489172273 3804248.018198866 3452019.316102113 2653997.4840346333 0.8330538499718638 0.8279428365944289 1.0010159851389377 1.1011307153032384 1.11868509744389 1.0387483475079782 1.3118994911872313 1.4334030235837338 1.3006867326996554 1.0 21.33973557237121 -5.279257096141462 0.6507961972732612 1.2733964415198589 0.7508759099596158 0.5975535444507171 0.12126541702615451 0.8059160896027062 0.575877445593451 0.07206097022081098 0.2654320540567513 5.2570596382097045e-06 5.279257096141462 -0.522520531560243 RRDSS(ph)HNELYYEEAEHER ddPTM_KYSE-520_SHP099_60min_R1 1 RRDSSHNELYYEEAEHER 18 2 Q8TAA9-2;Q8TAA9 Q8TAA9-2 VANGL1 Vang-like protein 1 1 RRDS(0.346)S(0.654)HNELYYEEAEHER 224.83 8.3868e-19 208070000.0 47494.0 52046.0 54099.0 74518.0 45646.0 55059.0 63860.0 72176.0 93888.0 39976.0 True False 44859.41314305826 49545.632037361334 57586.308101460505 81600.16831534638 49238.080509786894 54715.35635790097 70315.5920135397 71925.63830200504 76840.30592387533 39621.84374085736 1.132188936901995 1.250462557002887 1.453397991221658 2.059474285170675 1.2427003859745538 1.3809391787964538 1.774667339395705 1.8153026591197363 1.939342006052054 1.0 15.27400839490815 -4.837081819114865 3.4456375114737776 1.6262487222704756 1.1772781640217596 0.21206572207281238 0.3088687962364253 0.3278888064937819 7.643306278048376 0.08238511936906914 0.2058564630827982 1.4551849045058625e-05 4.837081819114865 -0.448970558248716 RRDYYDR ddPTM_KYSE-520_SHP099_60min_R1 3 RRDYYDR 7 2 P62995;P62995-3;H7C2L4;H7BXF3 P62995 TRA2B Transformer-2 protein homolog beta 0 ;; 109.01 0.034402999999999996 3655460000.0 780230.0 998880.0 901390.0 765390.0 888030.0 739050.0 642390.0 635130.0 950450.0 419390.0 False True 736949.0865500564 950892.3054505535 959495.041674993 838132.435477105 957912.9088004672 734437.3148133219 707329.0503222327 632926.8822704563 777872.238894717 415674.5308804823 1.7728993041480072 2.287588569442473 2.308284415796632 2.016318954403513 2.304478233899524 1.7668566636922305 1.7016415435027192 1.522650139111939 1.8713492915888472 1.0 18.665094828610087 -7.942531902265415 0.3837783547382464 0.9537876772903009 2.2077105201987863 0.6896070887823424 0.21580619759985276 0.772961273954937 0.3166411240833729 0.3513426104848824 0.19889703972558598 1.1414794511059078e-08 7.942531902265415 1.2539228429084854 RREDEEEELRER ddPTM_KYSE-520_SHP099_60min_R1 2 RREDEEEELRER 12 3 A0A0U1RQE4 A0A0U1RQE4 0 ; 105.65 0.00035357 52981000.0 20420.8 24386.0 19568.5 18217.7 20363.9 20134.6 17284.4 20817.7 25603.0 11511.5 False True 19288.017516144446 23214.459955867744 20829.916820707032 19949.104730648764 21966.423075258514 20008.93249284936 19031.675831488054 20745.488257587713 20954.140599107228 11409.517065811482 1.690520063635368 2.0346575426430333 1.8256615683694182 1.7484617986528177 1.9252719417091464 1.753705470392428 1.6680527073767482 1.8182617316688527 1.8365493016261072 1.0 13.47795010706527 -11.188275765899071 0.4419535957223939 4.868714852320311e-13 1.832110133950472 0.8460852413391403 0.10368232675087659 25.272815729670945 1.5420384986697375 25.2009432656188 0.05774956466403552 6.482226979912236e-12 11.188275765899071 1.832110133949985 RREDQMDGDGPRPR ddPTM_KYSE-520_SHP099_60min_R1 4 RREDQMDGDGPRPR 14 3 Q15527 Q15527 SURF2 Surfeit locus protein 2 0 ;;; 107.35 0.00022379 3968530000.0 607826.0 737030.0 694400.0 445665.0 631839.0 685877.0 484633.0 561373.0 576512.0 432086.0 False True 574108.6801089089 701621.9724954149 739162.1350792842 488020.8676059313 681561.1346278588 681596.1872298453 533624.4332022826 559425.7280884433 471831.953484845 428258.05419782095 1.3405671521678297 1.6383158836548621 1.7259736923426323 1.1395486035167588 1.591473010132886 1.5915548593862578 1.246034786670447 1.3062818611463485 1.1017468296507422 1.0 18.708120853593694 -7.4707093159476194 0.9533521893156692 1.003034783007007 1.5106045279940727 0.523378943769824 0.16613221681010668 0.4382162806452956 0.7387359230463495 0.15440645693972763 0.058699869922031946 3.382911871159791e-08 7.4707093159476194 0.5075697449870658 RREDS(ph)YHVR ddPTM_KYSE-520_SHP099_60min_R1 5 RREDSYHVR 9 2 B1AVT0;P49760-3;P49760;P49760-2 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 RREDS(1)YHVR;RREDS(1)YHVR;RREDS(1)YHVR;RREDS(1)YHVR;RREDS(1)YHVR 122.42 0.00044875 2722711000.0 315760.0 309035.0 326627.0 316276.0 292330.0 278966.0 273808.0 280983.0 399217.0 188803.0 True False 298244.1633480455 294188.4947290078 347681.8990416778 346334.7759481535 315334.7078698242 277224.8697168163 301487.18474856386 280008.3355549252 326729.25624160434 187130.35230651108 1.5937775976584225 1.572104637772179 1.857966357441526 1.850767508741034 1.685107220625119 1.4814532559781348 1.6111078776506627 1.496327731464344 1.7459981890401004 1.0 17.513684055306374 -6.193569834749764 4.882484999429052 1.506895570905884 1.7229750178589438 0.2622709263146574 0.20007671907885863 0.35198993793026845 16.41718956956542 0.06549086165411899 0.06494465345703443 6.403688016960602e-07 6.193569834749764 0.2160794469530598 RREEEGLQLR ddPTM_KYSE-520_SHP099_60min_R1 5 RREEEGLQLR 10 2 C9J352;C9JWD9;F2Z3G4;C9J4U1;C9JYI4;P52294 C9J352 KPNA1 Importin subunit alpha-5;Importin subunit alpha-5, N-terminally processed 0 ;;;; 209.21 3.9059e-09 2561646000.0 1479233.0 1338608.0 1101163.0 872797.0 1419792.0 1244592.0 942903.0 1059574.0 1248776.0 983295.0 False True 1397176.996712122 1274299.2623884291 1172145.7289030938 955747.3644640141 1531521.5528885645 1236824.0396700397 1038220.8370864807 1055898.5851004315 1022029.7574811822 974583.7712919333 1.4336140595281905 1.3075317893906497 1.2027141877698901 0.9806723573870421 1.571462195454312 1.2690792480881083 1.0652966606556442 1.0834354277218317 1.0486833329128324 1.0 19.894426673499378 -6.753927051395142 5.573626604011118 1.054640403555345 1.2901180113340727 0.4099659558828147 0.14401181454925835 0.19043352265453703 18.893891896641016 0.060592473101973285 0.043803689355724866 1.7622720310378798e-07 6.753927051395142 0.23547760777872773 RREEEMMIR ddPTM_KYSE-520_SHP099_60min_R1 2 RREEEMMIR 9 2 P23246;P23246-2;H0Y9K7 P23246 SFPQ Splicing factor, proline- and glutamine-rich 0 ; 142.43 0.00025584 202256000.0 131175.0 114940.0 89334.0 71766.0 134978.0 107785.0 96131.0 86481.0 100502.0 90005.0 False True 123898.46125912038 109418.10987154275 95092.61257945387 78586.61906276527 145600.0006802353 107112.27383418428 105848.85962814883 86181.0175958172 82253.37024924713 89207.62572283049 1.3888774670909285 1.226555566129588 1.0659695492278667 0.8809405970172902 1.6321474705830286 1.2007075960858302 1.1865449704605178 0.9660723160997805 0.922044159148565 1.0 16.44487942066222 -7.2278190634059465 3.56319492242243 0.9524650478949193 1.2247324898596177 0.3014284876676946 0.18443732371341598 0.32307937901757494 8.65731995343452 0.10607889484209015 0.053260916088423205 5.918081430569164e-08 7.2278190634059465 0.27226744196469843 RREEEMR ddPTM_KYSE-520_SHP099_60min_R1 2 RREEEMR 7 2 Q15233-2;Q15233;H7C367 Q15233-2 NONO Non-POU domain-containing octamer-binding protein 0 ; 145.63 0.016305 430660000.0 181202.0 171316.0 112144.0 102883.0 183219.0 182671.0 141917.0 162131.0 162586.0 123564.0 False True 171150.3638427683 163085.72220944165 119372.98167674414 112660.96938709801 197637.29292649188 181530.88253063295 156263.35533644733 161568.60540266003 133064.48085952623 122469.31909133721 1.3974958390609238 1.331645537179911 0.9747174440295219 0.9199117805421604 1.613769835521782 1.482255995848624 1.2759387942698257 1.3192578075996544 1.0865127841552478 1.0 16.902060846205853 -7.891357867946678 3.9895302644903032 1.0031843797358024 1.2846552147745023 0.20215260342169705 0.1983595788108836 0.37446243583805383 10.205344540753412 0.20832608216968845 0.0550954068837749 1.2842279924738395e-08 7.891357867946678 0.28147083503869985 RREEGPPPPS(ph)PDGAS(ph)SDAEPEPPSGR ddPTM_KYSE-520_SHP099_60min_R1 3 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 2 RREEGPPPPS(0.999)PDGAS(0.539)S(0.461)DAEPEPPSGR;RREEGPPPPS(0.999)PDGAS(0.499)S(0.499)DAEPEPPS(0.002)GR;RREEGPPPPS(0.996)PDGAS(0.514)S(0.467)DAEPEPPS(0.024)GR 90.71 0.0014941 1075560000.0 731990.0 668546.0 644385.0 582151.0 622653.0 602823.0 586105.0 634814.0 847680.0 637979.0 True False 691385.0555141121 636428.0466519953 685923.0881524547 637478.456009919 671652.2486890487 599060.5580511626 645354.2132335684 632611.978400702 693762.6802738435 632327.0024001512 1.0933979616397713 1.0064856383426257 1.0847600775372022 1.0081468189563536 1.062191312627215 0.9473904416184701 1.0206020157038513 1.0004506782083782 1.0971580806141414 1.0 19.270311302990315 -4.2513614198911505 24.201921737965275 1.0251592668096199 1.0933980207588547 0.18798797438518133 0.04249452726936422 1596.6985676530496 3834302.9626823687 0.010215004371289587 0.1337547653646363 5.605812661016523e-05 4.2513614198911505 0.06823875394923484 RREEGPPPPS(ph)PDGASSDAEPEPPSGR ddPTM_KYSE-520_SHP099_60min_R1 2 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 RREEGPPPPS(0.994)PDGAS(0.003)S(0.003)DAEPEPPSGR;RREEGPPPPS(0.968)PDGAS(0.027)S(0.005)DAEPEPPSGR 156.69 1.5331e-07 4943100000.0 1292100.0 1294690.0 1157170.0 893680.0 1152700.0 993770.0 972910.0 1025050.0 1414060.0 908560.0 True False 1220424.6372625085 1232491.1490306917 1231763.0297374635 978615.0785053093 1243410.9320341635 987567.5128097358 1071261.237486579 1021494.3407984682 1157302.3495517527 900510.8652489828 1.3552580922219883 1.3686577215144644 1.3678491590402884 1.0867332269608223 1.3807839305640939 1.0966747331101694 1.1896150050231602 1.1343498232151088 1.285162005493148 1.0 19.780384157726896 -1.0000000000399674 0.10021410873668965 0.9172525948828467 2.266865923552615 0.4762257053204694 0.09751622431252338 110.47061689651423 0.7860243144978382 1.2022365421086283 20.504570296300873 0.09999999999079717 1.0000000000399674 1.3496133286697682 RREEGPPPPSPDGAS(ph)SDAEPEPPSGR ddPTM_KYSE-520_SHP099_60min_R1 7 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 RREEGPPPPS(0.006)PDGAS(0.497)S(0.497)DAEPEPPSGR;RREEGPPPPS(0.009)PDGAS(0.495)S(0.495)DAEPEPPSGR;RREEGPPPPS(0.283)PDGAS(0.606)S(0.111)DAEPEPPSGR;RREEGPPPPS(0.005)PDGAS(0.498)S(0.498)DAEPEPPSGR;RREEGPPPPS(0.026)PDGAS(0.767)S(0.207)DAEPEPPSGR;RREEGPPPPS(0.001)PDGAS(0.5)S(0.5)DAEPEPPSGR;RREEGPPPPS(0.021)PDGAS(0.575)S(0.404)DAEPEPPSGR 166.61 2.7581e-10 10757490000.0 2177650.0 2053940.0 2152990.0 1708530.0 1944300.0 1964150.0 1569993.0 1781870.0 2543490.0 1762937.0 True False 2056851.4134623478 1955265.6393732051 2291775.180305798 1870908.1775117242 2097305.348446277 1951891.011285553 1728703.2140951015 1775689.1088615847 2081656.3321651064 1747318.7497242312 1.1771472227302364 1.119009133097091 1.3115953690003586 1.0707309000186704 1.2002992291917443 1.1170778151345357 0.9893462279666674 1.0162365104488411 1.191343212275174 1.0 20.73671138118484 -6.531584939365472 6.087393864841295 1.0503566970339715 1.1731257164324973 0.36922670802290114 0.07789010472264322 0.17278376453431102 25.664891487190957 0.028677973528967636 0.022950416957497926 2.940458542280064e-07 6.531584939365472 0.1227690193985258 RREEGPPPPSPDGASS(ph)DAEPEPPSGR ddPTM_KYSE-520_SHP099_60min_R1 2 RREEGPPPPSPDGASSDAEPEPPSGR 26 2 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3;F8WCB7;E9PD53 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4;Structural maintenance of chromosomes protein 1 RREEGPPPPS(0.048)PDGAS(0.15)S(0.803)DAEPEPPSGR;RREEGPPPPS(0.001)PDGAS(0.187)S(0.812)DAEPEPPSGR 184.62 2.9077e-15 4286600000.0 873850.0 895170.0 866770.0 799060.0 790550.0 790620.0 682670.0 699860.0 997260.0 663250.0 True False 825375.7985232131 852164.6895224368 922643.3810810355 875002.4221538511 852761.7873857957 785685.447314401 751680.9458171495 697432.3490085513 816182.7228787899 657374.1210006919 1.255564787471067 1.2963161498131746 1.403528602063823 1.3310569950972106 1.2972244573419984 1.195187675046268 1.1434598987147508 1.0609367280033484 1.2415802460193452 1.0 19.326355137063047 -6.434083605906012 1.800334843712231 1.1126070416409564 1.3260470294135875 0.682413019671501 0.0665961144768604 0.20956997313861062 1.3526689488667931 0.02932493382053961 0.023641323463662028 3.6805811206050696e-07 6.434083605906012 0.21343998777263118 RREELYR ddPTM_KYSE-520_SHP099_60min_R1 2 RREELYR 7 2 Q9HCD5;Q5JY17 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 0 ; 167.24 0.0080899 874030000.0 104916.0 89648.0 66230.0 75944.0 105026.0 92184.0 72460.0 84394.0 79142.0 68601.0 False True 99096.10033513926 85341.1755156086 70499.29177174678 83161.6949266039 113290.94868380326 91608.64546208136 79784.96394145145 84101.25691170772 64771.80780746565 67993.2485107704 1.4574402974648586 1.2551419057745157 1.0368572367972595 1.2230875380727066 1.6662087952138003 1.3473197334816294 1.1734247986226634 1.2369059980769377 0.9526211679267764 1.0 16.053103878506473 -7.56543023199353 1.6576152966547968 0.9698005483610218 1.3146376546699763 0.39295409430560646 0.16092459786399352 0.4407196666655753 2.1749241824875964 0.15766697425128393 0.05046538402865513 2.7200054110908902e-08 7.56543023199353 0.3448371063089545 RREPES(ph)PPASAPIPLFGADTIGQR ddPTM_KYSE-520_SHP099_60min_R1 1 RREPESPPASAPIPLFGADTIGQR 24 2 Q96AY4 Q96AY4 TTC28 Tetratricopeptide repeat protein 28 1 RREPES(0.5)PPAS(0.5)APIPLFGADTIGQR 99.11 0.0014653 459790000.0 278790.0 244950.0 183890.0 251740.0 213380.0 239790.0 212510.0 211450.0 279550.0 206110.0 True False 263324.9629459137 233182.234322554 195743.8436344029 275665.2939116092 230171.79203387673 238293.381664416 233992.58469773454 210716.52930280106 228790.76688202278 204284.0257511535 1.2890139695341638 1.1414609314905637 0.9581945671701529 1.3494216833547625 1.1267243789010608 1.1664807406658935 1.1454277143665175 1.0314880398895372 1.1199640600421783 1.0 17.640216869547483 -7.53754255720175 0.8113502868667682 1.0130552544233813 1.1713085205451845 0.22281214946199512 0.10101155500735981 0.9690593576846193 1.2712928045609055 0.09468339684553916 0.03840723667373813 2.90039697029043e-08 7.53754255720175 0.15825326612180324 RREPGGYDSSSTLMSSELETTSFFDS(ph)DEDDSTSR ddPTM_KYSE-520_SHP099_60min_R1 1 RREPGGYDSSSTLMSSELETTSFFDSDEDDSTSR 34 2 Q92997-2;Q92997 Q92997-2 DVL3 Segment polarity protein dishevelled homolog DVL-3 1 RREPGGYDSSSTLMSSELETTSFFDS(0.994)DEDDS(0.002)T(0.002)S(0.001)R 94.902 0.0009459 359900000.0 62687.0 57157.0 58542.0 61996.0 60629.0 51000.0 70722.0 60586.0 82162.0 58809.0 True False 59209.6271465636 54411.09192559391 62315.71099051185 67888.08120022286 65400.15736817837 50681.69008251054 77871.26994020611 60375.84130687872 67243.45193547041 58287.99801270967 1.0158116450260133 0.9334870604704865 1.0691002112806127 1.1647008563481611 1.1220175610409178 0.8695047318567953 1.3359743445507652 1.035819437368801 1.153641473855527 1.0 15.83091123055506 -4.903046228316506 5.562221194002627 1.1015002587901832 0.9763021490442851 0.14753736979338317 0.11578057674959144 0.3541644272407501 16.557679904417846 0.029367442877412765 0.06303289784381705 1.2501259539375214e-05 4.903046228316506 -0.12519810974589807 RRES(ph)ASSSSSVK ddPTM_KYSE-520_SHP099_60min_R1 2 RRESASSSSSVK 12 2 Q9NPF5 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 RRES(0.962)AS(0.037)S(0.001)SSSVK;RRES(0.9)AS(0.053)S(0.043)S(0.003)SSVK 108.63 0.00023033 2960800000.0 116929.0 131056.0 122149.0 110205.0 116059.0 132867.0 166437.0 162423.0 161208.0 146658.0 True False 110442.71527781738 124759.87304093342 130022.91998531006 120678.8500656587 125192.18301462026 132037.7277684887 183262.07622858614 161859.59252281307 131936.69092297283 145358.72421819737 0.7597941979184701 0.8582895434171319 0.8944968434789865 0.8302140151182683 0.8612636337306786 0.9083577781701456 1.26075732443477 1.1135182521266924 0.9076626919545828 1.0 17.149258136957492 -6.541945408384587 23.975941568178193 1.0806036134781292 0.8482398115649552 0.593651898623448 0.08972297577509528 104.39186862327222 131268.88417319945 0.03461000627071131 0.026813902698053865 2.87114146710715e-07 6.541945408384587 -0.23236380191317396 RRES(ph)EKS(ph)LENETLNK ddPTM_KYSE-520_SHP099_60min_R1 7 RRESEKSLENETLNK 15 3 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 RRES(1)EKS(0.991)LENET(0.009)LNK;RRES(1)EKS(1)LENETLNK;RRES(1)EKS(0.894)LENET(0.106)LNK;RRES(1)EKS(0.993)LENET(0.007)LNK;RRES(1)EKS(1)LENETLNK;RRES(1)EKS(0.998)LENET(0.002)LNK;RRES(1)EKS(1)LENETLNK 184.35 1.378e-10 18675100000.0 18341390.0 15680590.0 14783870.0 17022850.0 15100200.0 16830400.0 17148020.0 18637830.0 18621480.0 16660420.0 True False 17323956.534045503 14927270.919354543 15736861.915228354 18640696.545893528 16288499.831614679 16725355.230680123 18881509.210147522 18573179.717832208 15240288.64131011 16512821.640410615 1.049121519707441 0.9039806305921775 0.9530086533919006 1.128861980818319 0.9864152951154653 1.012870822134322 1.1434453554527708 1.1247732290875976 0.922936671465867 1.0 23.977083327092032 -5.225208216459027 24.582116950220353 1.0510589638551717 0.9622312643736811 0.17830702062057635 0.07463909174682529 738.887472328697 501318.84338056133 0.02013554190252594 0.03487406200369648 5.953766300334695e-06 5.225208216459027 -0.08882769948149061 RRES(ph)EKSLENET(ph)LNK ddPTM_KYSE-520_SHP099_60min_R1 3 RRESEKSLENETLNK 15 3 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 RRES(0.997)EKS(0.408)LENET(0.594)LNK;RRES(0.868)EKS(0.397)LENET(0.735)LNK;RRES(1)EKS(0.289)LENET(0.711)LNK 210.34 1.3990999999999998e-13 8700290000.0 3502010.0 3086130.0 2949340.0 3166200.0 3318270.0 3282020.0 3524480.0 3446080.0 3225510.0 2978000.0 True False 3307746.524216142 2937867.682424426 3139459.1755108526 3467114.6960472544 3579398.970626353 3261535.6957764947 3880768.834010026 3434126.352801119 2639838.692490187 2951617.2368489383 1.120655646986056 0.9953416878540827 1.0636403447970268 1.174649155982246 1.2126907669260043 1.1049995423046168 1.3147940679981336 1.163472793805505 0.8943702657423166 1.0 21.49307421541645 -3.7843235143275633 18.082911708797376 1.115356535727694 43.27464378942466 0.0 0.11593426080481671 25181.787023629597 2115590.1850121873 0.028725798773423412 89710.4683316759 0.0001643147255156073 3.7843235143275633 42.15928725369697 RRES(ph)LSYIPK ddPTM_KYSE-520_SHP099_60min_R1 2 RRESLSYIPK 10 2 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RRES(0.929)LS(0.071)YIPK;RRES(0.999)LS(0.001)YIPK 182.43 9.5246e-05 10581000000.0 10681400.0 9063200.0 9019900.0 9404600.0 8591200.0 8675000.0 8937800.0 9057200.0 10611600.0 9506000.0 True False 10088881.449157007 8627790.26785946 9601337.186350275 10298410.356403895 9267278.562758654 8620856.10717213 9841320.04852201 9025782.687166372 8684800.936667033 9421784.23555609 1.0708037030909086 0.9157278549533918 1.0190572131886213 1.0930424746450442 0.9836012299863162 0.9149918838767922 1.0445282764365023 0.9579695800191135 0.9217787968325768 1.0 23.167568863136687 -5.98596659123392 24.978418747119356 0.9677164647779622 1.0192076575946414 0.1882886141790081 0.055452013394237006 449.2191690903693 799572.2411526237 0.01741913882134406 0.0197421393151641 1.032840855565165e-06 5.98596659123392 0.05149119281667913 RRES(ph)QEEPR ddPTM_KYSE-520_SHP099_60min_R1 7 RRESQEEPR 9 2 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;H0YD62;H0YF37 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 RRES(1)QEEPR;RRES(1)QEEPR;RRES(1)QEEPR;RRES(1)QEEPR;RRES(1)QEEPR;RRES(1)QEEPR;RRES(1)QEEPR 141.58 0.00030106 4978280000.0 2728362.0 2440980.0 2467055.0 2289522.0 2313692.0 2485055.0 2345115.0 2409571.0 2906952.0 2147806.0 True False 2577014.321005197 2323711.656814321 2626085.3127275645 2507117.482510112 2495766.3972933018 2469544.849960655 2582182.1103168246 2401212.760599098 2379122.7950965073 2128778.1098077833 1.2105603252552644 1.0915706273511705 1.233611573056191 1.1777260725104368 1.1723938656615815 1.1600762139477472 1.2129879100222338 1.1279770068736352 1.1176001783066667 1.0 21.021594149662537 -8.137021447511893 1.2480093043840494 1.000791212060976 1.177169404295856 0.6695660786670962 0.0378886567815841 0.3615938901889053 1.1799789076753888 0.03433729090645137 0.010541300814998458 7.2942148708832595e-09 8.137021447511893 0.17637819223487994 RRES(ph)YSTTV ddPTM_KYSE-520_SHP099_60min_R1 1 RRESYSTTV 9 2 O60447;O60447-2 O60447 EVI5 Ecotropic viral integration site 5 protein homolog 1 RRES(0.503)Y(0.391)S(0.097)T(0.01)TV 46.461999999999996 0.06831 42059000.0 37300.0 32483.0 26182.0 28254.0 21893.0 29264.0 31638.0 39072.0 34612.0 34746.0 True False 35230.89464429345 30922.467922022966 27869.733612681157 30939.25166512515 23615.85454586962 29081.352521070352 34836.277797124494 38936.46835147336 28327.333297515874 34438.177471978925 1.023018557615586 0.8979124388096158 0.8092685402808477 0.8983997974428025 0.6857463512720722 0.844450974350567 1.0115598546255675 1.1306193071092259 0.8225561100196077 1.0 15.071721174383173 -6.761237888432831 24.99998765026298 1.0020687833495345 0.8530780371063603 0.2668372431466296 0.10572698830526993 6.885490018483664 854482.8671296891 0.04271264596154584 0.030967153745430843 1.7328545521782131e-07 6.761237888432831 -0.1489907462431742 RRET(ph)PS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 RRETPSPR 8 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RRET(1)PS(1)PR;RRET(1)PS(1)PR;RRET(1)PS(1)PR;RRET(1)PS(1)PR 96.334 0.006927600000000001 7577370000.0 2256870.0 2143030.0 1895800.0 1979010.0 2162100.0 2298810.0 2250040.0 2160440.0 2277820.0 2212080.0 True False 2131676.9221411957 2040075.6220463908 2018006.3013872493 2167094.5153889474 2332244.969333794 2284462.2740897257 2477496.00147424 2152945.9378904877 1864225.307169409 2192482.6921721976 0.9722662485555319 0.9304865344342537 0.9204206302709345 0.9884203524735254 1.0637461256413054 1.0419522499520393 1.1299956940684746 0.9819671304941802 0.8502805125099673 1.0 21.06413402316139 -5.470970546356816 5.314743924556447 1.018649125697188 0.9412183223428598 0.16975867091904306 0.06823522112928682 0.36043158740286096 22.747467339987402 0.02093794443059129 0.030706138040005576 3.3808776437829058e-06 5.470970546356816 -0.07743080335432806 RRET(ph)PS(ph)PRPMR ddPTM_KYSE-520_SHP099_60min_R1 17 RRETPSPRPMR 11 3 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR;RRET(1)PS(1)PRPMR 110.55 0.0050643 87885550000.0 7189580.0 6771580.0 6872580.0 6401992.0 6384461.0 6510753.0 5772742.0 6101238.0 8337920.0 5473247.0 True False 6790759.665327599 6446263.132451204 7315597.5033168 7010435.3948509265 6886881.75808602 6470116.975485795 6356307.09789266 6080074.22941765 6823963.909858536 5424758.289701729 1.2518087079048414 1.1883042134225008 1.348557320462482 1.2923037341883823 1.2695278554917298 1.1927014310975952 1.1717217170688263 1.1208009471979539 1.2579295786898073 1.0 22.3711274263251 -6.4999956653231425 1.924495876441169 1.1441691995576273 1.2721630994147102 0.447315513707055 0.06967960009081232 0.34718969135013783 2.5778433976989032 0.030754812786813517 0.023800150055917044 3.162309222900048e-07 6.4999956653231425 0.12799389985708287 RRFS(ph)DSEER ddPTM_KYSE-520_SHP099_60min_R1 2 RRFSDSEER 9 2 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 RRFS(1)DSEER;RRFS(0.977)DS(0.023)EER 122.46 0.00054408 1218060000.0 805290.0 711870.0 705620.0 676220.0 742010.0 750470.0 686320.0 719860.0 867210.0 651630.0 True False 760618.9583941848 677670.6966613459 751105.3942319186 740487.7454870426 800401.9655406165 745786.0383572889 755699.9234377177 717362.9736765869 709746.5245850788 645857.0651604682 1.1776893053034934 1.0492580064800767 1.1629591665847931 1.1465195403615545 1.2392865367846528 1.1547230472302608 1.1700730149169432 1.1107147577589052 1.0989219796004503 1.0 19.300855391367104 -8.075858738507357 1.2929041500595444 1.0012582625075366 1.155401560070181 0.5310091452776904 0.04466683616956082 0.44853309112750633 1.6436753274623865 0.04434676266058351 0.013543227126700934 8.397330792326337e-09 8.075858738507357 0.15414329756264444 RRGDDWNDR ddPTM_KYSE-520_SHP099_60min_R1 1 RRGDDWNDR 9 2 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9;A0A087X0F4 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 0 95.64200000000001 0.035313 675790000.0 226650.0 257780.0 268740.0 247270.0 272590.0 249920.0 228850.0 240910.0 268310.0 157200.0 False True 214077.27268442648 245395.86186433132 286063.41039920296 270770.46645556367 294041.28217506054 248360.15657688334 251984.39136076666 240074.33943881697 219591.66754468041 155807.3302997494 1.3739871691054244 1.5749956140845707 1.8360073935472796 1.7378544766452442 1.887210836674823 1.5940210008032132 1.6172820038440257 1.540841107905198 1.4093795659178534 1.0 17.249403584205595 -8.141008912983594 0.9666598103834146 1.0007985889345707 1.6814580832509602 0.6897418585925459 0.13537893135322443 0.43254263151555683 0.8639260739854431 0.13846799106935367 0.04632130634852431 7.2275497041969645e-09 8.141008912983594 0.6806594943163895 RRGDDWNDREWDR ddPTM_KYSE-520_SHP099_60min_R1 2 RRGDDWNDREWDR 13 3 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 0 ; 188.4 1.3593999999999999e-08 682550000.0 46977.0 74943.0 49185.0 47468.0 39715.0 49672.0 22915.0 42858.0 68507.0 24205.0 False True 44371.09216367223 71342.6257882637 52355.54379878248 51979.3444482254 42840.34455256075 49361.97862310712 25231.47182884848 42709.33560113239 56067.85572093261 23990.56253120504 1.8495227907206342 2.9737787805295026 2.1823391481830616 2.166658008982272 1.7857165498656982 2.057558198516643 1.051724893738084 1.7802556961963456 2.3370796598872556 1.0 14.550179365920481 -5.727032145405053 1.3082227913577074 1.6445817520686783 2.414771446682165 0.321357976612927 0.4568767620283973 0.5213774869430797 1.8686013185590553 0.17545898940606752 0.2583011044697176 1.8748557307403036e-06 5.727032145405053 0.7701896946134867 RRGDS(ph)ES(ph)EEDEQDSEEVR ddPTM_KYSE-520_SHP099_60min_R1 8 RRGDSESEEDEQDSEEVR 18 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 2 RRGDS(1)ES(0.879)EEDEQDS(0.121)EEVR;RRGDS(1)ES(1)EEDEQDSEEVR;RRGDS(1)ES(1)EEDEQDSEEVR;RRGDS(0.999)ES(0.997)EEDEQDS(0.004)EEVR;RRGDS(1)ES(0.994)EEDEQDS(0.006)EEVR;RRGDS(1)ES(1)EEDEQDSEEVR;RRGDS(0.998)ES(0.903)EEDEQDS(0.099)EEVR;RRGDS(1)ES(0.999)EEDEQDS(0.002)EEVR 208.37 1.5805999999999998e-13 11406160000.0 4448370.0 4056700.0 3919090.0 3819110.0 3736270.0 4005000.0 3556420.0 3799680.0 4974300.0 3712890.0 True False 4201610.048494258 3861810.0427691555 4171720.8121657064 4182077.0661427053 4030293.192531689 3980003.3094206816 3915937.640914389 3786499.7969319797 4071092.5118985693 3679996.6831847094 1.1417428900664495 1.0494058487648155 1.1336208076566672 1.1364350096434028 1.0951893546392626 1.0815236132159618 1.0641144484743106 1.0289410896031301 1.1062761361989601 1.0 21.81127303529257 -6.531499292653282 1.6358242798592375 1.0500000328202062 1.111509790150963 0.41455319705250593 0.03493988494843439 0.4074410372499686 2.2050952229362717 0.01666123474941042 0.012310145926323308 2.9410384838892757e-07 6.531499292653282 0.06150975733075681 RRGDS(ph)ESEEDEQDS(ph)EEVR ddPTM_KYSE-520_SHP099_60min_R1 1 RRGDSESEEDEQDSEEVR 18 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 2 RRGDS(0.738)ES(0.346)EEDEQDS(0.916)EEVR 77.031 0.047825 20052000.0 30084.0 30462.0 28804.0 24475.0 28540.0 27605.0 26479.0 28838.0 31756.0 25750.0 True False 28415.18054903281 28998.559795605808 30660.7519280295 26801.096641322936 30785.935629613094 27432.70695544518 29155.75573013652 28737.967708839813 25989.910903614782 25521.875033196855 1.1133657112603432 1.1362237201571888 1.2013518555415068 1.050122555903991 1.2062568126193378 1.0748703580658892 1.1423829829200636 1.1260131816905974 1.0183386161796162 1.0 14.639446704017569 -7.783064238101411 4.2196531234319705 1.001631277427251 1.132737974438957 0.5364281658283545 0.04559191269402364 0.14489912638969524 5.528119983430111 0.038273074376862684 0.010796469393191245 1.647918623765433e-08 7.783064238101411 0.13110669701170585 RRGDS(ph)ESEEDEQDSEEVR ddPTM_KYSE-520_SHP099_60min_R1 1 RRGDSESEEDEQDSEEVR 18 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 RRGDS(0.499)ES(0.499)EEDEQDS(0.002)EEVR 52.853 0.050585000000000005 4170600.0 1740.8 1787.7 1286.5 1753.7 764.3 1097.7 1620.0 1636.5 1236.1 1053.2 True False 1644.2343538012344 1701.8162086075945 1369.42984847278 1920.371120730869 824.446061727865 1090.8488471288601 1783.765409676393 1630.8233634619705 1011.6553995452268 1043.869467377201 1.5751340614765699 1.6302959917809772 1.3118784400443988 1.8396659551274577 0.7897980422775909 1.0450050329278222 1.7088012107090695 1.5622866789652678 0.9691397546927831 1.0 10.027725603330964 -1.0000000000006954 0.094476047209103 0.8432732817714602 2.965667229642022 0.1995999185633479 0.3122602411202993 276.9495090577245 1.873441746117898 5.171596291324822 76.13417296319844 0.09999999999983987 1.0000000000006954 2.122393947870562 RRGEDMMHPLK ddPTM_KYSE-520_SHP099_60min_R1 3 RRGEDMMHPLK 11 2 O60884;A0A087WT48 O60884 DNAJA2 DnaJ homolog subfamily A member 2 0 ;; 75.479 0.011148 2984300000.0 2240760.0 2132170.0 2004470.0 1396270.0 2105600.0 2135240.0 1712430.0 1881190.0 2258310.0 1656600.0 False True 2116460.5759556834 2029737.3527475828 2133681.3434653985 1528971.0809961176 2271298.740774816 2121913.1751329377 1885539.1361062622 1874664.5909630444 1848257.8313623338 1641923.812815299 1.2890126566388773 1.236194601056017 1.2995008214217414 0.9312070810243571 1.3833155491425446 1.2923335166779952 1.14837188022339 1.1417488292277582 1.1256660125985063 1.0 20.646955755256215 -7.862211178919891 0.9061539217031966 1.004593097479029 1.2307456776704386 0.285744248251978 0.11425528469761308 0.7614991026613893 1.3938338202582172 0.10956907091272883 0.039096271883965826 1.3733739993062935e-08 7.862211178919891 0.2261525801914097 RRGEEGHDPK ddPTM_KYSE-520_SHP099_60min_R1 6 RRGEEGHDPK 10 2 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ;;;;; 111.94 0.0004327 3732060000.0 3383300.0 4201230.0 1301251.0 1097914.0 5023560.0 5527740.0 2292827.0 2782750.0 2139743.0 2861590.0 False True 3195621.6045586616 3999396.6046252083 1385131.7215352135 1202259.4164601194 5418885.591853503 5493239.324248957 2524608.3289951202 2773097.2897487315 1751219.609731494 2836238.5388833308 1.126711156607027 1.4101058672589049 0.48836926180424883 0.423892207928839 1.9105888018808879 1.9368044150516788 0.8901255287184329 0.9777376802871246 0.6174444024094585 1.0 21.435547443365607 -5.737303276349576 24.999511242343626 1.2401392025643376 0.8746940192039878 0.11934569070593537 0.47689349021960015 585.6531966321497 606600.6794014255 0.1558032508149802 0.2010390494752652 1.8310353279541225e-06 5.737303276349576 -0.3654451833603498 RRGEEGHDPKEPEQLR ddPTM_KYSE-520_SHP099_60min_R1 6 RRGEEGHDPKEPEQLR 16 3 P51991 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ;;;;; 186.43 4.2363e-12 10247570000.0 2499000.0 2789610.0 2802480.0 2290640.0 2201800.0 2181780.0 1838220.0 2093520.0 3546420.0 1383500.0 False True 2360375.488367004 2655592.9483100255 2983132.344926541 2508341.7368939724 2375069.1334716887 2168162.701729801 2024045.2168983556 2086258.0677512428 2902479.5259729675 1371243.2663467128 1.721339711410618 1.9366315324815389 2.1754946172857044 1.8292463477882628 1.7320552755014682 1.5811656144035282 1.4760657474664198 1.5214354148184686 2.1166773228398763 1.0 20.387053105444306 -5.887388570165105 2.1349662456488954 1.5691009622601335 1.9458729254298066 0.29671402662052293 0.2729372924539873 0.41981062037446715 3.9087541329215068 0.09323733549515154 0.11014529551959676 1.2960191831561761e-06 5.887388570165105 0.3767719631696731 RRGNDPLT(ph)SSPGR ddPTM_KYSE-520_SHP099_60min_R1 3 RRGNDPLTSSPGR 13 2 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 RRGNDPLT(0.714)S(0.104)S(0.183)PGR;RRGNDPLT(0.939)S(0.008)S(0.053)PGR;RRGNDPLT(0.639)S(0.148)S(0.213)PGR 93.90899999999999 0.005143600000000001 4773900000.0 1887570.0 2166120.0 2330630.0 1170050.0 1476460.0 1306480.0 929950.0 839150.0 2519250.0 1164050.0 True False 1782862.7293224942 2062056.3437875921 2480866.138939849 1281251.2002116414 1592649.002091751 1298325.7737058492 1023958.4214373832 836239.184509083 2061817.7051244318 1153737.4226171966 1.5452933175021384 1.7872839203827842 2.150286616613446 1.1105223555158557 1.380425884495369 1.1253217138095954 0.8875142656936479 0.7248089280246415 1.7870770807167715 1.0 20.137883489848136 -5.2782517669384825 24.488467269049867 1.1318783393114302 1.8235875323245048 0.5150577374418861 0.30329351398891274 473.74539785406375 690043.6288540905 0.08560858862574199 0.1273875389870323 5.26924307045194e-06 5.2782517669384825 0.6917091930130745 RRGNDPLTSS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 RRGNDPLTSSPGR 13 2 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 RRGNDPLT(0.001)S(0.12)S(0.879)PGR;RRGNDPLTS(0.006)S(0.994)PGR 103.6 0.00059092 979380000.0 161760.0 157429.0 173871.0 125766.0 134377.0 120539.0 103113.0 95171.0 185699.0 87909.0 True False 152786.8503394345 149865.87453425344 185079.00286343624 137718.7628270733 144951.70539945748 119786.67138932816 113536.6683259024 94840.87401407844 151980.7426908414 87130.19465216697 1.7535465282658427 1.7200222624606083 2.1241660666809175 1.5806089195239525 1.6636219622614197 1.3748009156587946 1.3030691458816646 1.088496064914044 1.7442947682782615 1.0 16.410885145744434 -6.067297564667905 1.400747935126733 1.2869258107218355 1.836167929295717 0.5453779000183034 0.21916831045384225 0.31713802304154154 1.2714256511549507 0.09070662751482782 0.09622184812566811 8.564508314754837e-07 6.067297564667905 0.5492421185738814 RRGS(ph)DIDNPTLTVMDISPPSR ddPTM_KYSE-520_SHP099_60min_R1 4 RRGSDIDNPTLTVMDISPPSR 21 2 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 RRGS(1)DIDNPTLTVMDISPPSR;RRGS(0.97)DIDNPT(0.03)LTVMDISPPSR;RRGS(1)DIDNPTLTVMDISPPSR;RRGS(0.999)DIDNPTLTVMDISPPSR 248.07 7.0633e-27 3694070000.0 682410.0 777630.0 710370.0 565876.0 732980.0 647900.0 599110.0 658120.0 819340.0 673490.0 True False 644555.3569493918 740271.4875535727 756161.5868321877 619656.6849031762 790661.3559142895 643856.2157736975 659673.8855501383 655837.1353263623 670568.5098805807 667523.4025672919 0.9655921492346708 1.1089820741961887 1.1327866317854831 0.9282920756335725 1.1844698670839249 0.9645447834449392 0.988240836220926 0.9824930973266492 1.0045617985850044 1.0 19.348458891275847 RRGS(ph)DPASGEVEASQLR ddPTM_KYSE-520_SHP099_60min_R1 2 RRGSDPASGEVEASQLR 17 2 Q8WWA1-3;Q8WWA1-2;Q8WWA1 Q8WWA1-3 TMEM40 Transmembrane protein 40 1 RRGS(0.997)DPAS(0.003)GEVEASQLR;RRGS(0.94)DPAS(0.06)GEVEASQLR 93.551 0.0010860999999999998 1128020000.0 272396.0 252678.0 286851.0 165580.0 253172.0 250520.0 195697.0 199863.0 258219.0 253074.0 True False 257285.65087203638 240538.9696025898 305341.8744378276 181316.67341655755 273095.196048367 248956.4117543244 215479.96257866744 199169.7219013748 211332.93877127164 250831.96124859265 1.025729135917602 0.9589645928901311 1.2173164572724116 0.7228611238934562 1.0887575677714767 0.9925226853669997 0.8590610283715446 0.7940364573555408 0.8425279526552256 1.0 17.936361663872653 -6.755618822306629 6.45902363181516 0.856143393262062 1.0007232049211927 0.19117509898024754 0.12609206809378629 0.2204743637584367 39.42094091218953 0.048889601834343294 0.03550129897888788 1.7554205481115534e-07 6.755618822306629 0.1445798116591307 RRGS(ph)S(ph)GSVDETLFALPAASEPVIR ddPTM_KYSE-520_SHP099_60min_R1 8 RRGSSGSVDETLFALPAASEPVIR 24 2 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 2 RRGS(0.661)S(0.661)GS(0.661)VDET(0.017)LFALPAASEPVIR;RRGS(0.664)S(0.664)GS(0.664)VDET(0.009)LFALPAASEPVIR;RRGS(0.5)S(0.5)GS(0.5)VDET(0.5)LFALPAASEPVIR;RRGS(0.509)S(0.534)GS(0.527)VDET(0.43)LFALPAASEPVIR;RRGS(0.818)S(0.643)GS(0.498)VDET(0.04)LFALPAASEPVIR;RRGS(0.818)S(0.609)GS(0.498)VDET(0.075)LFALPAASEPVIR;RRGS(0.5)S(0.5)GS(0.5)VDET(0.5)LFALPAASEPVIR;RRGS(0.815)S(0.629)GS(0.485)VDET(0.071)LFALPAASEPVIR 146.39 5.0453e-07 1966837000.0 1218940.0 1303153.0 1172057.0 1100577.0 1077729.0 1091775.0 907511.0 1066842.0 1650008.0 876638.0 True False 1151322.9683033521 1240547.5738074684 1247609.6695775052 1205175.5071794603 1162540.1408608006 1084960.8272516266 999251.068333846 1063141.3741047953 1350408.1405168022 868871.669334043 1.3250782698275767 1.427768469834332 1.4358963626167607 1.3870581234432253 1.337988315065956 1.2487008905276054 1.1500559905466061 1.223588490253863 1.5542089679962041 1.0 19.728783583942246 -6.060177243079643 2.6090633388185305 1.2438150625176139 1.3991586077789606 0.24594461578334958 0.1314655704153729 0.44095061916649436 5.9398515073620075 0.045873431093657685 0.048117621127849335 8.706082071947005e-07 6.060177243079643 0.15534354526134675 RRGS(ph)SGSVDET(ph)LFALPAASEPVIR ddPTM_KYSE-520_SHP099_60min_R1 1 RRGSSGSVDETLFALPAASEPVIR 24 2 Q9NQC3-5;Q9NQC3 Q9NQC3-5 RTN4 Reticulon-4 2 RRGS(0.37)S(0.37)GS(0.37)VDET(0.891)LFALPAASEPVIR 157.15 4.1172e-07 92728000.0 105150.0 126360.0 117160.0 106310.0 95066.0 111570.0 85265.0 97039.0 160890.0 74591.0 True False 99317.11988867167 120289.47592977314 124712.321062628 116413.67043673288 102547.15334845129 110873.65024520984 93884.41830620829 96702.39435807276 131676.4317068453 73930.18177091994 1.343390716884962 1.6270685807658651 1.6868932021439038 1.574643368218034 1.3870810390566048 1.4997075293114106 1.269906499041468 1.3080232192274976 1.7810916807273365 1.0 16.17387584002175 -5.761205034123058 23.8113419960217 1.3907533364198044 1.5721392755061818 0.16183107134051866 0.2017183173992895 6.493982206323311 659681.7366636562 0.059011744155588276 0.07146229623541124 1.7329856473132297e-06 5.761205034123058 0.18138593908637746 RRHES(ph)EEGDSHR ddPTM_KYSE-520_SHP099_60min_R1 3 RRHESEEGDSHR 12 2 Q6UN15;Q6UN15-3;Q6UN15-5;H0Y8P7 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 1 RRHES(1)EEGDSHR;RRHES(1)EEGDSHR;RRHES(1)EEGDSHR 161.24 2.2684e-06 297843800.0 128552.9 107986.8 107297.8 145767.8 118844.2 101000.0 129521.2 112274.8 156067.3 49092.9 True False 121421.8143731473 102798.95203650874 114214.38787055 159621.52788531274 128196.56240900012 100369.6215359522 142614.46690109745 111885.34492393534 127729.41245647166 48657.97509969824 2.495414454143619 2.112684546076523 2.347290195215261 3.2804802821789156 2.6346464715461444 2.062757879469889 2.930957702388686 2.2994245998664504 2.6250457852954057 1.0 15.570388663360358 -9.20949099191407 10.664042221006865 1.0000032338008902 2.53042198309664 0.633117650255397 0.34988134737092946 0.0 0.0 0.34583853695992717 0.0838781657232269 6.173180960964661e-10 9.20949099191407 1.53041874929575 RRHS(ph)DENDGGQPHK ddPTM_KYSE-520_SHP099_60min_R1 3 RRHSDENDGGQPHK 14 2 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RRHS(1)DENDGGQPHK;RRHS(1)DENDGGQPHK;RRHS(1)DENDGGQPHK 94.01 0.0012730999999999999 1656173900.0 193131.0 143054.8 142925.7 124494.0 136949.3 183313.3 173752.9 158291.1 188542.8 132927.3 True False 182417.6384328964 136182.23267836764 152138.91931120565 136325.87232951395 147726.43077507245 182169.17369808408 191317.53879688983 157742.02511952067 154308.18029720566 131749.66753787445 1.3845775996395306 1.0336438430800514 1.154757519729375 1.0347340898626858 1.1212660611276695 1.3826917145404969 1.4521291960140335 1.1972859443776138 1.1712225402986025 1.0 17.00743979575232 -6.22432162698795 24.754980351785658 1.2662127411068271 1.1338929008002963 0.07897378633130736 0.14700186602303517 973.3407395085563 649151.3192107135 0.04827304660707633 0.04827183754588363 5.965933017486067e-07 6.22432162698795 -0.13231984030653088 RRHS(ph)DENDGGQPHKR ddPTM_KYSE-520_SHP099_60min_R1 2 RRHSDENDGGQPHKR 15 3 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 RRHS(1)DENDGGQPHKR;RRHS(1)DENDGGQPHKR 173.49 1.1287e-08 951260000.0 148096.0 174467.0 270390.0 183547.0 144083.0 133553.0 127536.0 127984.0 352018.0 41387.3 True False 139880.81965794336 166085.34343969406 287819.77203929634 200991.25169458232 155421.51237987189 132719.44618803018 140428.5835114127 127540.05337569022 288100.40485163947 41020.64072083215 3.4100105995396 4.0488237268158604 7.0164621269098895 4.899758954581853 3.7888611598633997 3.2354308430055605 3.423363971009275 3.1091677539526965 7.023303385539977 1.0 15.324062405680916 -5.772959003787601 5.860699294626538 3.6687403596154 4.947614100119248 0.12209844110857038 1.624584388237809 0.3641022315298349 42.584586309581816 0.49638353291687537 0.5937092049675013 1.6867122389004411e-06 5.772959003787601 1.278873740503848 RRHS(ph)EVETDSK ddPTM_KYSE-520_SHP099_60min_R1 2 RRHSEVETDSK 11 2 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 RRHS(0.997)EVET(0.003)DSK;RRHS(1)EVETDSK 146.0 4.5288000000000004e-05 6718000000.0 979230.0 851900.0 814670.0 1000810.0 936730.0 869340.0 1111640.0 1022610.0 1280980.0 730450.0 True False 924910.1598533907 810973.445272031 867184.9317180868 1095926.6814955005 1010445.3217353707 863914.1265947007 1224015.419760904 1019062.8045889683 1048386.3228779586 723978.7812815013 1.2775376623831771 1.1201618973370215 1.1978043475018687 1.5137552506105514 1.3956836137473536 1.1932865284608238 1.690678582588149 1.4075865632210163 1.448089847360208 1.0 19.46558788916443 -5.233841996149726 20.228085026472474 1.4014364125318863 1.1906665054019512 0.16884769571624825 0.17764291198080262 102.53663115065729 75153.46391326154 0.04598714414575611 0.07957491874589619 5.8365741032024095e-06 5.233841996149726 -0.21076990712993515 RRHS(ph)EVETDSKK ddPTM_KYSE-520_SHP099_60min_R1 7 RRHSEVETDSKK 12 3 Q9NX58 Q9NX58 LYAR Cell growth-regulating nucleolar protein 1 RRHS(0.999)EVET(0.001)DSKK;RRHS(0.993)EVET(0.007)DSKK;RRHS(1)EVETDSKK;RRHS(1)EVETDSKK;RRHS(0.975)EVET(0.025)DSKK;RRHS(1)EVETDSKK;RRHS(1)EVETDSKK 178.01 5.922e-07 7866710000.0 5479930.0 5953110.0 6039840.0 6565370.0 6648460.0 6724700.0 7532350.0 7729490.0 9271450.0 4468980.0 True False 5175947.358930369 5667113.659799709 6429177.750485682 7189340.790849528 7171655.977437192 6682728.652899197 8293793.44665184 7702678.203266522 7587988.394234761 4429388.314013823 1.1685467590535157 1.2794348244135507 1.4514820771402834 1.6231001396070175 1.619107531111532 1.5087249478119118 1.8724466808231068 1.738993661697389 1.7131007390405737 1.0 22.078676049759146 -4.824021021242705 1.5317336894541085 1.6279311792003106 1.1547762375854431 0.28241356705923426 0.22113558729901622 0.5270640540968746 2.1798805481681236 0.06327217149780757 0.2766945072359019 1.4996122477139669e-05 4.824021021242705 -0.4731549416148675 RRHSDENDGGQPHKR ddPTM_KYSE-520_SHP099_60min_R1 1 RRHSDENDGGQPHKR 15 3 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 0 103.76 0.00077839 61878000.0 46791.0 44388.0 62565.0 88279.0 50956.0 30219.0 40957.0 28386.0 67057.0 8183.7 False True 44195.409954454015 42255.53385225366 66598.0400075395 96669.00961795074 54965.94730001974 30030.392011831103 45097.333261800006 28287.53559134221 54881.13916940727 8111.198784822253 5.448690277096014 5.209530055079231 8.21062851180005 11.917968253821943 6.776550391401146 3.7023370784629566 5.559885099374772 3.487466691640463 6.766094707492726 1.0 12.985699436232698 -8.043666501728085 0.4242810254290392 0.9317440777868873 7.476984798012732 0.3778242588179852 2.209217618028845 1.5460895206046559 0.712127776324733 3.5863319538364213 1.8054708667247235 9.043436600189648e-09 8.043666501728085 6.545240720225845 RRHT(ph)MDKDSR ddPTM_KYSE-520_SHP099_60min_R1 16 RRHTMDKDSR 10 3 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;F6UYG0 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 1 RRHT(0.997)MDKDS(0.003)R;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR;RRHT(1)MDKDSR 194.3 1.7078e-06 13710721000.0 4231009.0 4305708.0 3247241.0 3798510.0 4386434.0 3984456.0 3826744.0 3623486.0 4964334.0 2009121.6 True False 3996306.4964626594 4098855.324680534 3456563.3506293055 4159519.248336329 4731621.400404559 3959587.5321450904 4213588.628942392 3610916.9727939907 4062936.0862761503 1991322.3456969543 2.0068606697947584 2.0583585241926023 1.7358130681848614 2.088822664660309 2.376120275368332 1.9884211818851718 2.115975164968911 1.8133261953278514 2.040320641736253 1.0 20.92529534583044 -9.385507281591705 0.7287770988265404 0.9308839194216877 2.042834228298628 0.781693951869214 0.16269120046645166 5.635732750553527 2.3692651678187207 1.27938535438102 0.06025036699071696 4.116164458841437e-10 9.385507281591705 1.1119503088769402 RRIS(ph)YVQDENRDPIR ddPTM_KYSE-520_SHP099_60min_R1 4 RRISYVQDENRDPIR 15 3 Q9NQS7;Q9NQS7-2;E9PM67 Q9NQS7 INCENP Inner centromere protein 1 RRIS(1)YVQDENRDPIR;RRIS(1)YVQDENRDPIR;RRIS(1)YVQDENRDPIR;RRIS(1)YVQDENRDPIR 149.94 7.1824e-06 4029320000.0 1135870.0 1190260.0 1220220.0 1106280.0 1021710.0 966840.0 1026060.0 1136100.0 1444790.0 892470.0 True False 1072861.0267992916 1133078.122983315 1298877.3336210302 1211420.5185847902 1102112.764265311 960805.5929289121 1129784.1581805926 1132159.134267734 1182452.556192012 884563.4101311525 1.2128706823179818 1.2809461820439936 1.4683823892607633 1.3695123545808607 1.2459398067368657 1.0861918794340084 1.2772223508692064 1.2799072641947409 1.3367640382238872 1.0 19.754606040984815 -5.885531111949067 5.502943292204806 1.2133476416982611 1.3381406393506343 0.2460608729612873 0.11068315511568605 0.3400047749705889 15.092157661862199 0.035507913315039275 0.04053463130085773 1.301574070193076e-06 5.885531111949067 0.12479299765237317 RRKDS(ph)AQDDQAK ddPTM_KYSE-520_SHP099_60min_R1 7 RRKDSAQDDQAK 12 3 Q13045-2;Q13045-3;Q13045;J3KS54 Q13045-2 FLII Protein flightless-1 homolog 1 RRKDS(1)AQDDQAK;RRKDS(1)AQDDQAK;RRKDS(1)AQDDQAK;RRKDS(1)AQDDQAK;RRKDS(1)AQDDQAK;RRKDS(1)AQDDQAK;RRKDS(1)AQDDQAK 197.7 6.2263e-08 6502470000.0 2756340.0 3530030.0 1641696.0 1078729.0 3715460.0 6161120.0 1662434.0 1186525.0 2437150.0 8627670.0 True False 2603440.3255724334 3360442.0601169467 1747522.3509664754 1181251.0798282984 4007845.563924396 6122666.164728584 1830489.0525123244 1182409.2217120158 1994624.9955518574 8551235.556025684 0.3044519483196674 0.39297737012389855 0.20435904724143314 0.13813805877396537 0.46868613753719385 0.7159978373434243 0.21406135294945283 0.13827349439331296 0.2332557654953537 1.0 23.027701457365648 -9.916395796174497 4.236015946932115 1.0000168333471129 0.3147969517325706 0.6013054525739485 0.1679956195928861 156045297.36108997 348029272.9202295 42081.8995473419 0.04464991569789535 1.2122835269792667e-10 9.916395796174497 -0.6852198816145423 RRKEDEVEEWQHR ddPTM_KYSE-520_SHP099_60min_R1 14 RRKEDEVEEWQHR 13 3 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ;;;;;;;;;;;;; 232.6 1.0115e-15 29531700000.0 14011138.0 18817890.0 12506433.0 8821252.0 5081313.0 9544284.0 5592179.0 9647910.0 19459810.0 4410544.0 False True 13233912.244628845 17913850.31817125 13312617.682180302 9659621.13787387 5481183.424383887 9484714.583283601 6157491.027727597 9614443.65204913 15926399.045889646 4371470.011511305 3.027336847737774 4.09790076816244 3.045341188919162 2.2096963063768893 1.253853603010062 2.1696853823331033 1.4085630260560402 2.1993616853670748 3.6432593621713005 1.0 22.059687071406152 -5.180543769646842 3.070191937606483 1.9752704901899496 3.5609678552727697 0.44944962347288653 0.7279224931405297 0.2327456854311625 4.2655297874307765 0.20647434637224307 0.38775684340147976 6.598667273419015e-06 5.180543769646842 1.58569736508282 RRLEEQAAQHK ddPTM_KYSE-520_SHP099_60min_R1 2 RRLEEQAAQHK 11 2 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 124.67 0.00027328 4844900000.0 850800.0 713280.0 602200.0 533640.0 836930.0 699630.0 553950.0 654540.0 781620.0 498250.0 False True 803604.4279722488 679012.9581448926 641018.7755540675 584356.9851552843 902791.6295196945 695263.3496554287 609948.672031011 652269.553510784 639697.5110367599 493835.8926326341 1.6272701923066826 1.3749769271024053 1.2980400677982373 1.1833019711063997 1.82812072388445 1.4078833880400772 1.2351242206786162 1.3208224903085553 1.2953645544606713 1.0 18.913672171673408 -8.238207077313387 0.6018687867261737 0.9948649263243184 1.4395876671706647 0.36217600155414875 0.17478528889366876 1.3862966225491562 1.0740147599997942 0.2045643250837744 0.08063052062467013 5.778204693219263e-09 8.238207077313387 0.4447227408463462 RRLS(ph)DK ddPTM_KYSE-520_SHP099_60min_R1 5 RRLSDK 6 2 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 RRLS(1)DK;RRLS(1)DK;RRLS(1)DK;RRLS(1)DK;RRLS(1)DK 79.47399999999999 0.019661 4144150000.0 610590.0 936920.0 467585.0 473522.0 842200.0 970690.0 1036780.0 722630.0 727550.0 4777990.0 True False 576719.3555190116 891908.9568544088 497726.277262452 518525.38851041975 908476.3485374962 964631.5636508258 1141587.8403977086 720123.3651931102 595445.2600429809 4735660.725819966 0.12178223671611406 0.18833886304217398 0.10510176004558945 0.10949377891099633 0.1918372960259302 0.20369524328282673 0.24106199884073115 0.15206396887066334 0.12573646942156763 1.0 22.17513429583369 -10.607294331714739 3.0797178485706955 1.0517343602657834 0.16202728632538874 0.971548872236964 0.043127579148800256 39474046.76252464 43172173.3914372 16501835.706710257 0.011704667969736926 2.4700495662047355e-11 10.607294331714739 -0.8897070739403946 RRLS(ph)ELLR ddPTM_KYSE-520_SHP099_60min_R1 6 RRLSELLR 8 2 P08238 P08238 HSP90AB1 Heat shock protein HSP 90-beta 1 RRLS(1)ELLR;RRLS(1)ELLR;RRLS(1)ELLR;RRLS(1)ELLR;RRLS(1)ELLR;RRLS(1)ELLR 109.72 0.00082862 2468550000.0 1061280.0 1007597.0 1003929.0 805619.0 817242.0 912799.0 828202.0 800888.0 1014095.0 825999.0 True False 1002408.6827907705 959190.5276860687 1068643.8696831935 882184.7875418151 881554.2959290908 907101.882855402 911924.7406325965 798109.9064566636 829960.9112546039 818681.2914774972 1.2244187002022426 1.1716287371792635 1.305323427819612 1.0775680313271985 1.076797900606871 1.1080036789631893 1.1138946866451782 0.974872535582549 1.013777791058044 1.0 19.642942401648572 -5.8750826432495264 0.48148686164420745 0.9907596694821453 1.2614291867159544 0.6846197078098957 0.0552297125533205 0.7900744933667009 0.362300942685911 0.05015399412685116 0.10064777486357064 1.3332676963597374e-06 5.8750826432495264 0.27066951723380905 RRLS(ph)EQLAHTPTAFK ddPTM_KYSE-520_SHP099_60min_R1 3 RRLSEQLAHTPTAFK 15 2 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 RRLS(0.999)EQLAHT(0.001)PTAFK;RRLS(1)EQLAHTPTAFK;RRLS(1)EQLAHTPTAFK 137.46 8.4025e-06 2596760000.0 1869630.0 1682280.0 1845310.0 1642470.0 1571570.0 1526560.0 1394220.0 1337970.0 1972960.0 1337240.0 True False 1765917.8968849946 1601460.7436462382 1964261.6352003939 1798569.854973389 1695243.6179898744 1517032.1727913197 1535161.363875939 1333328.8943545462 1614720.1982742087 1325393.0939569771 1.332372942741708 1.2082911484509533 1.4820219330825597 1.3570086211960988 1.2790496839912633 1.1445903707421636 1.1582687210876406 1.0059875069771766 1.2182953160359709 1.0 20.33798887661864 -6.270297554838446 1.874140422517839 1.0952055902688478 1.3451008479073525 0.6446352176574358 0.08584201165886368 0.2265201212322179 1.5662495401850511 0.03518206146407622 0.03200099154366592 5.366639775590933e-07 6.270297554838446 0.24989525763850473 RRLS(ph)ESACR ddPTM_KYSE-520_SHP099_60min_R1 1 RRLSESACR 9 2 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 RRLS(0.955)ES(0.045)ACR 97.463 0.0022164999999999997 354030000.0 56865.0 60555.0 50120.0 47631.0 49174.0 69609.0 51782.0 70123.0 73310.0 64443.0 True False 53710.58509243292 57645.84690509195 53350.8153948354 52157.83591921763 53043.71403821282 69174.5444108525 57016.629903619076 69879.75967983129 59998.751994709644 63872.08515589537 0.8409085903699427 0.9025201974288647 0.8352759310208795 0.816598296296633 0.830467862584206 1.0830168490979304 0.8926689924785782 1.094057905096925 0.9393579659763429 1.0 15.962897928776421 -6.245477616046491 24.979776687935633 1.0008770024917777 0.8462059377545562 0.6343270111085402 0.059470243174974805 508.1225497621399 795200.0147516464 0.018434348857808487 0.018380080195696473 5.682276778038678e-07 6.245477616046491 -0.15467106473722148 RRLS(ph)ESSALK ddPTM_KYSE-520_SHP099_60min_R1 2 RRLSESSALK 10 2 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RRLS(0.861)ES(0.135)S(0.004)ALK;RRLS(0.471)ES(0.471)S(0.058)ALK 115.06 0.00045566 1631520000.0 568820.0 551320.0 550330.0 538970.0 606550.0 679770.0 694250.0 785380.0 892970.0 708010.0 True False 537266.4206854423 524833.7596518093 585805.1523591328 590193.5467527614 654282.0342025866 675527.3032821224 764431.5652270579 782655.7000890697 730829.1579418333 701737.5822234442 0.7656229825729474 0.7479060163613898 0.8347923314909522 0.84104594324668 0.9323742247486654 0.9626494581375062 1.0893410650815776 1.115311079120542 1.0414564880880584 1.0 19.420572103822042 -5.952415061026975 0.9597440579915719 1.0731473382072378 0.7636324821907201 0.90430523584191 0.03853636369799823 0.15068243487196703 0.3013652114021109 0.020076256117628814 0.025430760167528123 1.1157963565853558e-06 5.952415061026975 -0.30951485601651774 RRLS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 4 RRLSPEK 7 2 Q9NQT8;E7ERX9 Q9NQT8 KIF13B Kinesin-like protein KIF13B;Kinesin-like protein 1 RRLS(1)PEK;RRLS(1)PEK;RRLS(1)PEK;RRLS(1)PEK 100.79 0.0037998000000000003 2261510000.0 1841810.0 1817880.0 1571400.0 1510850.0 1720570.0 1659960.0 1617730.0 1544540.0 1988620.0 1617560.0 True False 1739641.1277427908 1730546.3161064922 1672694.958328898 1654440.7297463852 1855969.0702958442 1649599.5739091015 1781265.9359233275 1539182.3512383457 1627536.7370306824 1603229.676842638 1.0850854078305225 1.0794126013900818 1.0433283405925116 1.0319424307343168 1.1576439091066135 1.028922803598411 1.1110485051844285 0.9600510603506133 1.015161308787593 1.0 20.612549688457356 -7.263608487644654 24.999999850345397 0.9907046367207218 1.0751308495750094 0.5051628490661553 0.038538175638460584 157.13089320158056 1810986.3578243137 0.01908001853242393 0.009918177033455898 5.449937381394496e-08 7.263608487644654 0.08442621285428753 RRLS(ph)S(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 RRLSSLR 7 2 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 2 RRLS(1)S(1)LR 65.5 0.02667 1457900000.0 484310.0 461550.0 385460.0 373740.0 414710.0 465230.0 427970.0 392970.0 531780.0 403560.0 True False 457444.35885195073 439376.44519932545 410307.36835780635 409260.1372309713 447345.3176228746 462326.32700169436 471233.38418469415 391606.8787898875 435222.1570828905 399984.7723649291 1.1436544350108357 1.0984829312413351 1.0258074724491246 1.0231892949604087 1.1184058707483386 1.1558598200330674 1.1781283107316918 0.9790544686851279 1.0880968155602992 1.0 18.609585551307365 -7.275762078332172 24.995655933004443 1.0251817367065323 1.1020126874195395 0.33163197883996953 0.05426679707797842 1170.3900783851268 2042529.3121402052 0.03214073982258567 0.01556363093579934 5.299536915004939e-08 7.275762078332172 0.07683095071300716 RRLS(ph)S(ph)LRAS(ph)T(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 RRLSSLRASTSK 12 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 4 RRLS(0.999)S(0.999)LRAS(0.995)T(0.995)S(0.012)K 50.123000000000005 0.061272 0.0 480440.0 557750.0 491780.0 505880.0 554310.0 480970.0 485450.0 505040.0 592830.0 527020.0 True False 453789.03546660417 530954.8528001821 523480.9256758213 553958.6831016317 597931.0434075277 477968.08782323677 534524.0235354343 503288.13411722216 485187.01602815033 522351.0128153559 0.8687434777254132 1.0164713760933541 1.002163129452694 1.0605104029872892 1.1446920341645597 0.9150323749677347 1.0233042732213125 0.9635056155143855 0.9288524461991566 1.0 18.994660078667618 -9.587782081825004 12.195726727088326 1.000000794074245 0.9969266058052655 0.0 0.07474714363349577 0.0 0.0 0.07356708959347746 0.017842640056657966 2.5835562297393734e-10 9.587782081825004 -0.0030741882689795386 RRLS(ph)S(ph)LRAS(ph)TSK ddPTM_KYSE-520_SHP099_60min_R1 3 RRLSSLRASTSK 12 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 3 RRLS(1)S(0.999)LRAS(0.954)T(0.026)S(0.022)K;RRLS(1)S(0.998)LRAS(0.973)T(0.006)S(0.024)K;RRLS(1)S(1)LRAS(0.549)T(0.371)S(0.08)K 136.34 1.635e-05 8650000000.0 5847830.0 5443490.0 5048290.0 5627380.0 4959870.0 5285570.0 5388490.0 6003810.0 6355060.0 5498860.0 True False 5523439.212539913 5181976.569554936 5373710.85094959 6162204.503266516 5350183.5512000425 5252580.797047363 5933211.155794534 5982984.184409784 5201141.302025638 5450144.378448339 1.0134482371478828 0.9507962009311485 0.9859758710611425 1.1306497728085694 0.9816590496861745 0.9637507618729867 1.0886337578975704 1.0977661817673068 0.9543125724508618 1.0 22.377863017803183 -5.033011519079022 24.958893182128318 1.0345673729111389 0.9786880929207336 0.12151954514549101 0.057952856352727795 1125.151662463681 850688.3357651774 0.01583481467826027 0.027454800139727897 9.268052407865811e-06 5.033011519079022 -0.05587927999040532 RRLS(ph)S(ph)LRAST(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 RRLSSLRASTSK 12 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 3 RRLS(0.998)S(0.993)LRAS(0.096)T(0.792)S(0.121)K 50.053000000000004 0.058649 4727500000.0 902830.0 854770.0 857860.0 692400.0 765730.0 770610.0 636750.0 668310.0 1129000.0 731120.0 True False 852748.2201530156 813705.5661640737 913159.0282245298 758205.4878223483 825988.5945922785 765800.3371467345 701118.9040811373 665991.7885947272 924002.0597739348 724642.8456027532 1.1767841569507322 1.1229056784342342 1.260150477943338 1.04631611617124 1.1398561368603957 1.0567969335428224 0.9675371920603882 0.9190621181676879 1.2751137548392628 1.0 19.466910584273254 -5.7851522318887385 1.3105110132843447 1.036068848647535 1.1747681032793413 0.22834515772448716 0.09986018824193657 0.6286986675108961 2.266151920623719 0.039283534275861315 0.054516687317233616 1.6400148031658859e-06 5.7851522318887385 0.13869925463180643 RRLS(ph)S(ph)LRASTS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 RRLSSLRASTSK 12 3 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 3 RRLS(0.994)S(0.873)LRAS(0.217)T(0.47)S(0.446)K;RRLS(1)S(0.994)LRAS(0.061)T(0.203)S(0.741)K 91.65299999999999 0.0014254 7993400000.0 4207600.0 3731400.0 3426100.0 3751500.0 3377500.0 3723900.0 3642500.0 4137200.0 4293000.0 3703600.0 True False 3974196.040357352 3552137.9430544144 3646951.8879538216 4108041.432070398 3643290.034653751 3700657.758789432 4010719.447374236 4122849.0188297345 3513499.4177232054 3670788.9853571947 1.082654452819394 0.9676769646045904 0.9935062741284069 1.119116748049917 0.9925087083967133 1.0081368810768976 1.0926041958208512 1.1231506456175528 0.9571510189603873 1.0 21.807658753081 -6.725454496525743 24.99361919939912 1.053489218171977 1.0256185894899417 0.004761388270383526 0.06025790584787736 640.7463778933326 445035.4299119915 0.022878927420075204 0.01772135392493684 1.8816788499612234e-07 6.725454496525743 -0.02787062868203538 RRLS(ph)SLR ddPTM_KYSE-520_SHP099_60min_R1 1 RRLSSLR 7 2 A2A3R5;P62753 A2A3R5 RPS6 40S ribosomal protein S6 1 RRLS(0.572)S(0.428)LR 57.888000000000005 0.037887 889640000.0 268460.0 215880.0 206510.0 505320.0 243230.0 234310.0 211070.0 377980.0 250490.0 254570.0 True False 253567.98863825764 205508.8007575137 219821.96502768237 553345.4608700017 262370.81721060927 232847.58437711888 232407.01544468896 376668.87560119515 205007.33033903717 252314.70785246324 1.0049671332934236 0.8144939409464845 0.8712213683406024 2.193076517733406 1.0398554227921828 0.9228458632434244 0.9210997544407322 1.4928534242302114 0.812506461014202 1.0 17.944864780344187 RRLSES(ph)SALK ddPTM_KYSE-520_SHP099_60min_R1 3 RRLSESSALK 10 2 Q96S55-2;Q96S55 Q96S55-2 WRNIP1 ATPase WRNIP1 1 RRLS(0.35)ES(0.58)S(0.07)ALK;RRLS(0.004)ES(0.692)S(0.304)ALK;RRLS(0.074)ES(0.608)S(0.319)ALK 111.95 0.00049349 4019000000.0 1067259.0 1045325.0 993130.0 1034832.0 1153211.0 1287203.0 1281601.0 1358675.0 1447190.0 1364050.0 True False 1008056.0157419287 995106.0179351867 1057148.748864183 1133182.1221464148 1243962.1448269696 1279169.0886132908 1411157.7363004168 1353962.0735421285 1184416.7766910885 1351965.5782148426 0.7456225454149376 0.7360439007989693 0.781934663055593 0.8381737970301633 0.9201137698117414 0.9461550717158986 1.0437822967088648 1.0014767353248166 0.8760702164140981 1.0 20.36662698960483 -5.626201196418409 1.2619654239167402 0.9803817717140626 0.7393660108704475 0.8483859765572623 0.041084370865289314 0.16702845280145265 0.5520964501501973 0.01629222528210071 0.027020720578627852 2.3648238872828854e-06 5.626201196418409 -0.2410157608436151 RRLT(ph)PEQK ddPTM_KYSE-520_SHP099_60min_R1 6 RRLTPEQK 8 2 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 RRLT(1)PEQK;RRLT(1)PEQK;RRLT(1)PEQK;RRLT(1)PEQK;RRLT(1)PEQK;RRLT(1)PEQK 138.99 0.00051141 4410610000.0 3857670.0 3380880.0 3309890.0 3020710.0 3313490.0 3221180.0 3033470.0 3205950.0 4122110.0 3106580.0 True False 3643677.3550255056 3218457.4499956593 3523250.8054112443 3307797.3701904197 3574242.8118208377 3201075.420783945 3340122.7514142236 3194829.307724359 3373638.733936879 3079058.1180826686 1.1833740109116309 1.045273368207741 1.1442625212950428 1.0742887088634063 1.1608234319547437 1.0396281258819682 1.084787172998904 1.0375995467450874 1.0956723142457752 1.0 21.55405766823608 -7.321567315193816 0.01449267247016515 2.604270403250522e-07 2.1399864920345704 0.4038395458003653 0.04384854431414534 458.4862444775878 6.620684106827901 486.25154264802626 489.71770564324225 4.769058884725747e-08 7.321567315193816 2.13998623160753 RRNDLDDPER ddPTM_KYSE-520_SHP099_60min_R1 1 RRNDLDDPER 10 2 Q15393 Q15393 SF3B3 Splicing factor 3B subunit 3 0 110.66 0.00044627 233840000.0 74875.0 65820.0 73431.0 95320.0 73695.0 63978.0 89248.0 68634.0 101410.0 43838.0 False True 70721.53449038808 62657.90840216579 78164.47975375406 104379.18414099692 79494.37723280785 63578.689570565875 98270.05881654235 68395.92467329609 82996.50033806442 43449.62942544792 1.6276671498829247 1.4420815374196911 1.798967696326866 2.4023032076739255 1.829575494290613 1.463273459665656 2.261700735219315 1.5741428771136405 1.9101774039401673 1.0 15.407056252139219 -9.995605170614686 4.495304171754163 0.9999773278936662 1.8147562851177959 0.39484375462219756 0.3016402836256693 22179503.03946014 16439196.368345093 4767.087546065737 0.07454905478683382 1.0101708436011108e-10 9.995605170614686 0.8147789572241296 RRNDS(ph)YTEEEPEWFSAGPTSQSETIELTGFDDK ddPTM_KYSE-520_SHP099_60min_R1 3 RRNDSYTEEEPEWFSAGPTSQSETIELTGFDDK 33 2 Q9NRA8;Q9NRA8-3;B1AKL4 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 RRNDS(0.341)Y(0.308)T(0.341)EEEPEWFS(0.002)AGPT(0.002)S(0.002)QS(0.002)ET(0.002)IELTGFDDK;RRNDS(0.459)Y(0.082)T(0.459)EEEPEWFSAGPTSQSETIELTGFDDK;RRNDS(0.353)Y(0.295)T(0.353)EEEPEWFSAGPTSQSETIELTGFDDK 191.52 1.3560000000000001e-15 1033130000.0 174576.0 239059.0 181081.0 192973.0 163655.0 160998.0 183372.0 172600.0 276854.0 166776.0 True False 164891.9212713718 227574.24680512567 192753.77099984416 211313.095900552 176533.7174304251 159993.15176282407 201909.03129825887 172001.29088514295 226584.29252139333 165298.49438976453 0.9975403701050413 1.3767472453107674 1.1660951402578517 1.2783727805910177 1.0679693005198738 0.9679044709600878 1.221481369468307 1.0405496524340603 1.3707583566195125 1.0 17.33471405843599 -5.768432434688008 24.97595588916657 1.1117962477199022 1.2142220729084616 0.09336778970003612 0.14109899157389522 367.07644926571425 1311025.53053003 0.04159015791981169 0.048155686145404254 1.7043844580984124e-06 5.768432434688008 0.10242582518855947 RRNDSYT(ph)EEEPEWFSAGPTSQSETIELTGFDDK ddPTM_KYSE-520_SHP099_60min_R1 1 RRNDSYTEEEPEWFSAGPTSQSETIELTGFDDK 33 2 Q9NRA8;Q9NRA8-3;B1AKL4 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 RRNDS(0.104)Y(0.029)T(0.867)EEEPEWFSAGPTSQSETIELTGFDDK 240.54 3.3748000000000002e-31 494690000.0 130930.0 128620.0 120740.0 126190.0 117280.0 95545.0 94360.0 127850.0 162120.0 125190.0 True False 123667.05189751579 122440.90213744398 128523.09359083038 138183.0596595929 126509.26876808052 94948.66821438176 103898.82966485448 127406.51819041441 132683.0947126222 124080.91399634627 0.9966645788985511 0.9867827226115486 1.0358006678981662 1.113652819027928 1.0195707356878896 0.7652157383139332 0.8373473914603331 1.0268018995585901 1.0693271869074823 1.0 16.92092169304418 -6.030912892713023 24.980353207603702 0.9302784635243649 1.0346568787660555 0.20355009537705304 0.08909058185031625 1086.3170024116105 877837.8466427072 0.032211517216270504 0.03225279275877751 9.312946483112822e-07 6.030912892713023 0.10437841524169056 RRPCEQIS(ph)PEEEER ddPTM_KYSE-520_SHP099_60min_R1 5 RRPCEQISPEEEER 14 2 P15407 P15407 FOSL1 Fos-related antigen 1 1 RRPCEQIS(1)PEEEER;RRPCEQIS(1)PEEEER;RRPCEQIS(1)PEEEER;RRPCEQIS(1)PEEEER;RRPCEQIS(1)PEEEER 191.21 5.5312e-11 11808800000.0 4500830.0 4167660.0 4031200.0 4015030.0 3923250.0 3976200.0 3794400.0 3876140.0 4717050.0 3958850.0 True False 4251159.987717832 3967439.3578147986 4291057.6021480495 4396617.244037208 4231987.454761024 3951383.0609034966 4177974.9817753704 3862694.575037876 3860552.627153795 3923777.668938691 1.0834354916107396 1.0111274625016962 1.0936036555069903 1.1205062098297764 1.0785492481549541 1.0070354118642693 1.0647838216851453 0.9844325802696827 0.9838866910616786 1.0 21.90381186648611 -6.9227961276239025 1.1583527358489276 0.9867506601781715 1.0743905389284873 0.5250189728796173 0.03306913324311434 0.4274852908311251 1.1004989931596216 0.025990546909918723 0.012836424406192355 1.1945487340508937e-07 6.9227961276239025 0.08763987875031587 RRPDLDEIHR ddPTM_KYSE-520_SHP099_60min_R1 3 RRPDLDEIHR 10 2 O00488;A9J4F5 O00488 ZNF593 Zinc finger protein 593 0 ;; 160.36 5.086e-05 2402480000.0 1431710.0 1770240.0 1632940.0 1784550.0 1479760.0 1764180.0 1624610.0 1683460.0 1507020.0 1176280.0 False True 1352290.1922568728 1685195.0132155877 1738201.9251963785 1954153.095455477 1596208.6933173195 1753169.0982306572 1788841.4334656564 1677620.4701825196 1233383.1568826528 1165859.074331993 1.1599087934634809 1.4454534431454855 1.4909194116727384 1.6761486344952592 1.369126619554688 1.503757303802072 1.5343547713865984 1.4389564803479808 1.057917877072192 1.0 20.15296197960375 -7.7770975336267405 4.430009515373364 1.00623375507145 1.4646445043391556 0.650856075121816 0.12423742591333968 0.11774236164372608 5.236603250695473 0.11235137939030265 0.032093651654631586 1.67071536379623e-08 7.7770975336267405 0.45841074926770564 RRPEAS(ph)PVQK ddPTM_KYSE-520_SHP099_60min_R1 9 RRPEASPVQK 10 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RRPEAS(1)PVQK;RRPEAS(1)PVQK;RRPEAS(1)PVQK;RRPEAS(1)PVQK;RRPEAS(1)PVQK;RRPEAS(1)PVQK;RRPEAS(1)PVQK;RRPEAS(1)PVQK;RRPEAS(1)PVQK 140.31 0.00018352 64540850000.0 19283260.0 17006300.0 16438640.0 17613970.0 17589980.0 15337450.0 16587920.0 18576060.0 17904080.0 16370610.0 True False 18213579.12757422 16189291.821023297 17498301.037153948 19287996.412966825 18974211.352704335 15241723.285411807 18264788.8360983 18511623.983545016 14653150.397127824 16225579.131541867 1.1225225910222065 0.9977635737852938 1.0784392282884967 1.1887400909759667 1.169401178156978 0.9393638995468899 1.1256787007739089 1.1408914180178118 0.903089515531849 1.0 23.951766636752904 -7.761318935248561 24.999999981831156 0.951544733916663 1.092926293757934 0.36768515607888697 0.07537976099514848 3.525781037655773 733214.649260125 0.060682093058071804 0.019559104366875815 1.7325312019037626e-08 7.761318935248561 0.141381559841271 RRPEEKEPEK ddPTM_KYSE-520_SHP099_60min_R1 1 RRPEEKEPEK 10 3 P26358;P26358-2 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 0 172.56 1.9217999999999998e-05 622030000.0 289070.0 316070.0 234400.0 233760.0 304200.0 290140.0 229060.0 287480.0 283680.0 188790.0 False True 273034.7108532412 300885.5227692578 249509.7990532603 255976.48011749334 328138.809338763 288329.1286380316 252215.62021016915 286482.7989783363 232170.86299085018 187117.46747639758 1.4591620682750046 1.6080033939493679 1.3334393759082523 1.3679988489037316 1.7536514028555534 1.5408990540896486 1.3478999241050698 1.5310318317260911 1.2407760008836988 1.0 17.513584715352835 -7.987960159738734 2.9071815226685214 1.0005245629634187 1.493282787492498 0.6239901590200125 0.12249110675087643 0.15921019428110916 3.176128189928524 0.12126399011992758 0.03258819374716708 1.0281106081355765e-08 7.987960159738734 0.49275822452907936 RRPENPKPQDGK ddPTM_KYSE-520_SHP099_60min_R1 2 RRPENPKPQDGK 12 3 P67809;H0Y449 P67809 YBX1 Nuclease-sensitive element-binding protein 1 0 ; 126.83 4.4476000000000006e-05 815690000.0 501460.0 510240.0 401210.0 434750.0 370160.0 492700.0 384940.0 574280.0 478880.0 279400.0 False True 473643.0141642729 485727.3045141459 427072.6385586971 476068.50928764616 399289.48607770115 489624.8765422153 423853.49185236386 572287.9567179593 391927.4635824108 276924.7333699106 1.7103673203923966 1.754004774522328 1.5421975255212101 1.7191260003913165 1.4418700750154305 1.768079255991136 1.5305728986156997 2.0665830377581633 1.4152851528031691 1.0 18.07913438735645 -8.007690273345666 24.925415101372074 0.999999972796523 1.6823788147597645 0.6365956991505487 0.16209926734292684 171.98958423303336 557447.5948685854 0.14723322066000807 0.038015454129298534 9.824483478664604e-09 8.007690273345666 0.6823788419632415 RRPES(ph)APAESSPSK ddPTM_KYSE-520_SHP099_60min_R1 5 RRPESAPAESSPSK 14 2 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 RRPES(0.916)APAES(0.017)S(0.066)PS(0.001)K;RRPES(1)APAESSPSK;RRPES(0.972)APAES(0.017)S(0.011)PSK;RRPES(0.998)APAES(0.001)S(0.001)PSK;RRPES(1)APAESSPSK 157.98 1.8794e-07 3867110000.0 2026163.0 1795210.0 1736274.0 1842883.0 1880967.0 1844970.0 1806617.0 1885260.0 2422660.0 1912480.0 True False 1913767.6993341951 1708965.416934854 1848197.000176622 2018030.046237024 2028988.4016617513 1833454.8578731278 1989247.4772428006 1878720.4730829906 1982766.0142886816 1895536.915086927 1.00961774160248 0.9015732710520612 0.9750255906210437 1.064621865274768 1.0704030006024465 0.9672482995611024 1.049437476743404 0.9911284017366842 1.0460181484768154 1.0 20.854175122215878 -5.047852879680055 7.561073765994683 1.0264856399607027 0.9513040281907563 0.36689537804687866 0.03953339675153514 0.24634550245777972 34.89816041549382 0.010357695047603777 0.018307055180689983 8.956681280614382e-06 5.047852879680055 -0.07518161176994642 RRPESAPAES(ph)SPSK ddPTM_KYSE-520_SHP099_60min_R1 2 RRPESAPAESSPSK 14 2 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 RRPES(0.016)APAES(0.608)S(0.376)PSK;RRPES(0.001)APAES(0.629)S(0.369)PSK 145.88 3.1208e-06 3016700000.0 845810.0 679350.0 631040.0 503900.0 655770.0 642120.0 668000.0 610840.0 785090.0 667210.0 True False 798891.2332195675 646713.0062748609 671717.8480996989 551790.5044969404 707375.3681790956 638112.2908976807 735527.9590517466 608721.138611128 642537.446508342 661299.0384815254 1.2080635033947444 0.9779433639580712 1.0157550654271283 0.8344039116765716 1.0696754826732708 0.964937575537557 1.112247132160763 0.9204930042071031 0.9716291860694918 1.0 19.33494327835672 -4.260322652748532 24.473563148746166 0.9849614434455027 1.2080635999529175 0.46216732108983116 0.07211395797603788 62.95308230633235 1379401.9663842896 0.017353119114929563 0.1032985038998771 5.4913275210657406e-05 4.260322652748532 0.22310215650741472 RRPESAPAESS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 4 RRPESAPAESSPSK 14 2 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 RRPESAPAES(0.194)S(0.8)PS(0.006)K;RRPES(0.011)APAES(0.114)S(0.875)PSK;RRPES(0.007)APAES(0.111)S(0.771)PS(0.111)K;RRPES(0.001)APAES(0.106)S(0.893)PSK 188.1 7.9755e-11 5140710000.0 2239750.0 1844900.0 1811600.0 1617860.0 1894810.0 1970520.0 1902440.0 1799450.0 2074220.0 1773150.0 True False 2115506.6026690667 1756268.2347486427 1928378.6346624834 1771620.9279726557 2043920.7670058582 1958221.25375272 2094757.2012251567 1793208.127944789 1697593.9348310828 1757441.2704898254 1.203742416996639 0.9993325320391185 1.0972649083886685 1.0080683535324502 1.1630094281535717 1.1142456289346923 1.1919358196483665 1.020351665831197 0.9659463239747055 1.0 20.745045047988253 -7.490500076769096 12.139133313154504 0.9863370113891787 1.104549252209125 0.40580157425008245 0.06482435980440784 1.3916730542163027 522.3383971104998 0.03564147960860447 0.016841963998265402 3.232212632046292e-08 7.490500076769096 0.11821224081994619 RRPGAALEDSR ddPTM_KYSE-520_SHP099_60min_R1 4 RRPGAALEDSR 11 2 Q9H5N1-2;Q9H5N1 Q9H5N1-2 RABEP2 Rab GTPase-binding effector protein 2 0 ;;; 125.74 0.00012258 866220000.0 533022.0 508830.0 424150.0 330441.0 511460.0 499444.0 380139.0 444349.0 482162.0 345463.0 False True 503454.20710698597 484385.0430305996 451491.3876639954 361846.0132892907 551708.9921906771 496326.7847366555 418567.1599191193 442807.65703083604 394613.53511489765 342402.4665861468 1.4703580033361685 1.4146657524405732 1.3185985257801942 1.0567856502232644 1.6112880193048194 1.4495420832833927 1.222442011275085 1.2932373456469473 1.1524844988685699 1.0 18.385333569046153 -7.856623867708106 1.0422073447129083 1.0021472724232634 1.3724131637801875 0.42891699895099744 0.1390864041462612 0.5147832580673671 1.2286300936251375 0.13727068333884054 0.046162627068617755 1.3911569581183051e-08 7.856623867708106 0.3702658913569241 RRPGAQPLPPPPPSQS(ph)PEPTEPHPR ddPTM_KYSE-520_SHP099_60min_R1 6 RRPGAQPLPPPPPSQSPEPTEPHPR 25 2 K7EPZ6;A0A0A0MS90;Q9UIS9-4;Q9UIS9-11;Q9UIS9-7;Q9UIS9-10;Q9UIS9-6;Q9UIS9-5;Q9UIS9;Q9UIS9-9;Q9UIS9-12 K7EPZ6;Q9UIS9-6 MBD1 Methyl-CpG-binding domain protein 1 1 RRPGAQPLPPPPPSQS(1)PEPTEPHPR;RRPGAQPLPPPPPSQS(1)PEPTEPHPR;RRPGAQPLPPPPPSQS(1)PEPTEPHPR;RRPGAQPLPPPPPSQS(1)PEPTEPHPR;RRPGAQPLPPPPPS(0.001)QS(0.999)PEPTEPHPR;RRPGAQPLPPPPPSQS(1)PEPTEPHPR 237.28 9.0211e-29 7396210000.0 1179830.0 1028492.0 1128778.0 959700.0 836913.0 924745.0 1049286.0 1042394.0 1112286.0 1097020.0 True False 1114382.4779672057 979081.7005220354 1201540.8359886566 1050909.5994556728 902773.2917164105 918973.3234382597 1155358.068924509 1038778.1785105874 910322.9008482833 1087301.256268644 1.0249068246196071 0.9004695753613013 1.1050670907086555 0.9665302908433504 0.8302880977205076 0.8451874015044871 1.0625924160976503 0.9553729221976841 0.8372315359703457 1.0 20.052320289550938 -5.525856515309932 24.95600923313473 0.9205449176611712 1.0052831243693485 0.18409488410640795 0.08354493987251263 159.716666296037 1338534.6975744404 0.025227060662480587 0.03275499082654909 2.9795006512672414e-06 5.525856515309932 0.08473820670817733 RRPPS(ph)PEPSTK ddPTM_KYSE-520_SHP099_60min_R1 13 RRPPSPEPSTK 11 2 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 RRPPS(0.994)PEPS(0.002)T(0.004)K;RRPPS(0.996)PEPS(0.003)TK;RRPPS(0.999)PEPS(0.001)TK;RRPPS(0.999)PEPSTK;RRPPS(0.999)PEPS(0.001)TK;RRPPS(1)PEPSTK;RRPPS(1)PEPSTK;RRPPS(0.998)PEPS(0.002)TK;RRPPS(0.999)PEPS(0.001)TK;RRPPS(1)PEPSTK;RRPPS(0.972)PEPS(0.027)T(0.001)K;RRPPS(0.86)PEPS(0.119)T(0.021)K;RRPPS(0.999)PEPS(0.001)TK 123.02 0.00015597 63329330000.0 6486890.0 6078310.0 5606850.0 5408930.0 5650300.0 5867330.0 5263060.0 5593590.0 7027470.0 5412220.0 True False 6127049.280405374 5786298.863870686 5968276.5222771885 5922993.080945898 6094946.464190708 5830709.817094441 5795101.467315701 5574187.141843715 5751458.59610233 5364271.9414434405 1.1421958743494802 1.0786736629004092 1.112597680995125 1.1041560058105695 1.136211312685735 1.0869526900840694 1.080314631803758 1.0391320952203236 1.0721787893838028 1.0 22.354950945758798 -7.634359520156625 0.5730698062333581 1.0024842925310669 1.1152676524199339 0.7335239710160288 0.02102008656192437 0.3986707773664707 0.3102765392000154 0.021012919799388356 0.010728016609018006 2.3208147706799402e-08 7.634359520156625 0.11278335988886701 RRPS(ph)ALEADSPMAPK ddPTM_KYSE-520_SHP099_60min_R1 1 RRPSALEADSPMAPK 15 2 Q86Y91;A0A494BYR6;Q86Y91-6 Q86Y91 KIF18B Kinesin-like protein KIF18B 1 RRPS(0.905)ALEADS(0.095)PMAPK 70.99 0.015488 995370000.0 320480.0 274880.0 364500.0 450020.0 372800.0 545690.0 643710.0 949610.0 927970.0 752870.0 True False 302702.3355389586 261674.352196708 387996.2532206207 492789.76549655356 402137.239058155 542284.1462965726 708782.488804191 946316.0245506403 759474.0402200329 746200.1575239967 0.4056583645645025 0.3506758200976297 0.5199627061297468 0.6603989030660399 0.538913366612661 0.7267274615646723 0.9498557212263757 1.2681798777564695 1.0177886356123014 1.0 19.50920313914667 -6.588224554716527 1.3094194724311687 1.1207552704624075 0.4714570323343968 0.8693278460548929 0.10391429595501964 0.15062343165258238 0.5264141820176563 0.062308967064885784 0.0422752335806351 2.5809253617447835e-07 6.588224554716527 -0.6492982381280108 down RRPS(ph)DENTIAPSEVQK ddPTM_KYSE-520_SHP099_60min_R1 7 RRPSDENTIAPSEVQK 16 2 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 RRPS(0.999)DENT(0.001)IAPSEVQK;RRPS(0.999)DENT(0.001)IAPSEVQK;RRPS(0.5)DENT(0.5)IAPSEVQK;RRPS(1)DENTIAPSEVQK;RRPS(0.934)DENT(0.066)IAPSEVQK;RRPS(0.967)DENT(0.033)IAPSEVQK;RRPS(0.999)DENT(0.001)IAPSEVQK 259.6 2.2959e-29 17558130000.0 13568760.0 13472800.0 13864200.0 10726660.0 11699800.0 11443490.0 10659310.0 10396810.0 15535800.0 11966140.0 True False 12816073.834147545 12825546.464914912 14757908.515504304 11746118.54131207 12620507.697244126 11372066.934162928 11736857.079640519 10360745.892743701 12714890.345647369 11860129.30911606 1.0806015263507047 1.0814002217544798 1.2443294782765077 0.9903870552476728 1.0641121499024144 0.958848477766765 0.9896061648011889 0.8735778188168752 1.072070127926372 1.0 23.4996164036573 -5.339024711957887 13.027250196219962 0.9887832270376865 1.130020753807906 0.48764685319007084 0.06691863515375024 1.146464262864487 191.1593145100271 0.018727250519754993 0.02777837241636313 4.5811581854792865e-06 5.339024711957887 0.1412375267702194 RRPS(ph)EGRLPNCR ddPTM_KYSE-520_SHP099_60min_R1 3 RRPSEGRLPNCR 12 3 A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;Q7Z5J4 A0A1W2PQJ7 RAI1 Retinoic acid-induced protein 1 1 RRPS(1)EGRLPNCR;RRPS(1)EGRLPNCR;RRPS(1)EGRLPNCR 89.506 0.0036753999999999997 1188410000.0 117431.0 75676.0 84465.0 87683.0 68436.0 93101.0 98402.0 129446.0 107050.0 103688.0 True False 110916.86833710509 72040.41136800825 89909.74904877838 96016.36595714484 73821.52385242477 92519.92212493761 108349.43447097308 128996.98203892351 87612.4185108944 102769.40498804334 1.0792790748375907 0.7009908384347439 0.8748688294851846 0.9342894022624322 0.7183219934085782 0.9002671771399454 1.054296602024493 1.255208026687822 0.852514603165092 1.0 16.649051304711552 -6.708395576344529 4.445439975912441 1.062901785728204 0.8538197897551567 0.27441520283214027 0.13605085020764354 0.2342096757777509 9.56788036629998 0.052463189231519144 0.03880410546292926 1.957061275698331e-07 6.708395576344529 -0.20908199597304722 RRPS(ph)LLSEFQPGNER ddPTM_KYSE-520_SHP099_60min_R1 3 RRPSLLSEFQPGNER 15 2 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J330 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 RRPS(0.982)LLS(0.018)EFQPGNER;RRPS(0.993)LLS(0.007)EFQPGNER;RRPS(0.952)LLS(0.048)EFQPGNER 148.38 4.9562e-06 1985280000.0 391351.0 378248.0 519038.0 400309.0 447185.0 436249.0 418392.0 605810.0 597720.0 484677.0 True False 369641.9798911233 360076.39831817686 552496.0199701632 438354.2470027106 482375.9153654002 433526.2081726505 460687.14647242305 603708.5865071168 489189.11529501923 480383.1388530005 0.7694732599768359 0.7495608592298281 1.1501153460326377 0.9125096439674355 1.0041483065312364 0.9024592520207325 0.9589994094555335 1.2567230980433193 1.0183311522195484 1.0 18.87382598867757 -4.7447992403754595 24.942987945722628 1.023024935780637 0.759516819628024 0.5239832346853489 0.1013521522670157 191.205901670393 286606.27485361946 0.026820055883735747 0.07052643440989335 1.7997026644347926e-05 4.7447992403754595 -0.26350811615261294 RRPS(ph)PQPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 12 RRPSPQPSPR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR;RRPS(1)PQPS(1)PR 100.11 0.0012369999999999998 67155810000.0 5406273.0 4773989.0 4733772.0 4336476.0 4258629.0 4815607.0 4313065.0 4422088.0 5509060.0 4135135.0 True False 5106376.2595519675 4544639.402536424 5038918.517422999 4748613.375230947 4593758.8740155455 4785551.010454289 4749071.70165797 4406748.808851098 4508753.576101147 4098500.9209863474 1.2459131663005858 1.1088540639982847 1.2294540405300995 1.1586220100416966 1.120838804864782 1.1676344845867683 1.1587338378626144 1.0752099106008173 1.1000982220143232 1.0 21.96666489141324 -8.237815024836834 0.23756358208194583 0.950801907820522 1.2164620338453016 0.6695124139384467 0.039532450593177615 2.2290498916799373 0.36513946882652126 0.19881365742514973 0.09986610002978719 5.7834232312641e-09 8.237815024836834 0.2656601260247796 RRPS(ph)PQPSPR ddPTM_KYSE-520_SHP099_60min_R1 12 RRPSPQPSPR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RRPS(0.998)PQPS(0.002)PR;RRPS(1)PQPSPR;RRPS(0.992)PQPS(0.008)PR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR;RRPS(1)PQPSPR 116.51 0.0004381 427680100000.0 2357283.0 1974855.0 1868380.0 2028063.0 1755860.5 1986925.0 1781682.0 1922730.0 2224233.0 1687590.0 True False 2226519.81286284 1879980.0014822104 1988818.7643136992 2220809.497760626 1894036.7318703656 1974523.864062593 1961791.8041006478 1916060.498398556 1820368.3555510687 1672639.265525151 1.3311416626129422 1.1239602227632517 1.18903029798794 1.3277277076616807 1.1323641450421789 1.1804839840601618 1.1728720259862564 1.1455312199651004 1.0883209506501306 1.0 20.67369490534366 -7.905975312063799 0.3981597243675227 0.9845253329225124 1.2372550468019499 0.5577000140330994 0.06345068167925672 1.0156944990037287 0.4468490934535881 0.09440628614348522 0.05414622680015055 1.241722892657435e-08 7.905975312063799 0.25272971387943743 RRPS(ph)SNLNNNVR ddPTM_KYSE-520_SHP099_60min_R1 6 RRPSSNLNNNVR 12 2 Q9NW75-2;Q9NW75 Q9NW75-2 GPATCH2 G patch domain-containing protein 2 1 RRPS(0.988)S(0.012)NLNNNVR;RRPS(0.971)S(0.029)NLNNNVR;RRPS(0.98)S(0.02)NLNNNVR;RRPS(0.996)S(0.004)NLNNNVR;RRPS(0.98)S(0.02)NLNNNVR;RRPS(0.954)S(0.046)NLNNNVR 127.66 6.3074e-05 4062410000.0 318093.0 320449.0 309799.0 201274.0 199776.0 294414.0 223896.0 262997.0 333284.0 301657.0 True False 300447.74718732527 305054.1490362451 329769.13923592574 220403.0204447655 215497.2346300482 292576.4530186715 246529.59269438588 262084.72479096148 272768.0270059307 298984.5536655948 1.004893876636072 1.0203006988027847 1.102963799276275 0.7371719299294627 0.7207637718672094 0.978567118038845 0.8245562845033185 0.8765828253592504 0.9123147790136795 1.0 18.18971142733621 -5.250405795213541 24.997752151225193 0.8562641701275041 1.0404775868519631 0.4588866368588501 0.08848676816688955 652.5086233637644 1478325.0412102037 0.024405429156232086 0.04176088110898775 5.618161312253101e-06 5.250405795213541 0.184213416724459 RRPSALEADS(ph)PMAPK ddPTM_KYSE-520_SHP099_60min_R1 1 RRPSALEADSPMAPK 15 2 Q86Y91;A0A494BYR6;Q86Y91-6 Q86Y91 KIF18B Kinesin-like protein KIF18B 1 RRPS(0.002)ALEADS(0.998)PMAPK 98.165 0.0010884 859730000.0 567980.0 509300.0 454760.0 421730.0 456460.0 357480.0 382890.0 397950.0 493180.0 467080.0 True False 536473.0171599414 484832.46352511493 484074.55724172614 461811.0924022523 492380.80509786936 355248.8347195271 421596.25784629263 396569.60433222796 403630.9440560757 462942.0345827407 1.1588341025102111 1.0472854640691778 1.0456483124891276 0.9975570544560558 1.063590618945766 0.7673721722844207 0.9106890849224485 0.856629069532786 0.8718822528610449 1.0 18.82047203799732 -6.2397270984668864 24.66350540346605 0.8741897453370665 1.0571798836510524 0.6550654749966093 0.06560835376724775 406.2057397547972 461419.0598670118 0.02085476239929264 0.020836209826625002 5.758016453436493e-07 6.2397270984668864 0.18299013831398592 RRPSPQPSPR ddPTM_KYSE-520_SHP099_60min_R1 2 RRPSPQPSPR 10 2 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 ; 91.54899999999999 0.035766 505520000.0 288750.0 198730.0 203946.0 172964.0 236950.0 244080.0 212370.0 248390.0 282940.0 235010.0 False True 272732.4618911456 189182.71250018835 217092.6854851375 189402.44655647723 255596.6169389218 242556.60618312127 233838.43213146602 247528.3930646621 231565.22833696834 232927.99423501306 1.1708874357797106 0.8121939705938144 0.9320162919794927 0.8131373267456179 1.0973203018312911 1.0413372895762516 1.0039086667081087 1.062682027025562 0.9941494112696916 1.0 17.829524513371524 -5.777517846808037 24.999901426573313 1.035306045263652 0.9234939150579136 0.20436650818013924 0.09715979461955579 346.3032098736023 538453.9265298607 0.02892169271475799 0.03289330486515512 1.669099216182141e-06 5.777517846808037 -0.11181213020573844 RRPT(ph)LGVQLDDK ddPTM_KYSE-520_SHP099_60min_R1 3 RRPTLGVQLDDK 12 2 H7C072;Q13769 H7C072 THOC5 THO complex subunit 5 homolog 1 RRPT(1)LGVQLDDK;RRPT(1)LGVQLDDK;RRPT(1)LGVQLDDK 148.46 4.9736000000000006e-05 2750500000.0 683270.0 1066130.0 1147630.0 1447630.0 1222160.0 1612930.0 2171850.0 2920570.0 3121590.0 2807060.0 True False 645367.6510350244 1014911.514506245 1221608.066072924 1585212.3199541708 1318337.0388608242 1602863.105583996 2391401.793213377 2910439.2243361636 2554787.944880175 2782191.632259635 0.23196376682035774 0.36478850081292075 0.4390812091835532 0.5697710760012229 0.4738483947599612 0.5761152779696149 0.8595388489725033 1.0460958873535138 0.9182645491623568 1.0 21.407790362816534 -6.600728561620314 0.8286387322024944 1.0382482750518232 0.35946334897780685 0.9054334812425735 0.08358198813082848 0.18754739574388704 0.2623979634117039 0.06803777762041914 0.04640936631709598 2.5076760858850464e-07 6.600728561620314 -0.6787849260740163 down RRQEEWEK ddPTM_KYSE-520_SHP099_60min_R1 6 RRQEEWEK 8 2 Q6P4H7;H3BSF0;H3BQQ6;H3BTI2;H3BTP8;H3BSY6;H3BP64;H3BUL4;H3BMX9;Q9GZU8;H3BN22 Q6P4H7 NIP30;FAM192A Protein FAM192A 0 ;;;;; 152.34 0.00024601 6765960000.0 5342840.0 5450820.0 4297110.0 3904990.0 6049950.0 5818290.0 4697200.0 5131340.0 5367930.0 3580650.0 False True 5046462.014512509 5188954.425352377 4574108.586219091 4276119.075521951 6526046.6454932615 5781975.893924906 5172038.816254293 5113540.579203758 4393249.226503362 3548928.226703545 1.4219678990803266 1.4621187282145138 1.2888704121434977 1.2049043548829004 1.8388781707076225 1.6292174776652353 1.4573523288912464 1.4408689758016093 1.2379087278933427 1.0 21.758951967046244 -7.986421268551901 2.1071028641757437 1.0012274880312668 1.4741513146949 0.4557710684010279 0.16348572509732892 0.31115959582402125 3.1683916324273693 0.16994076929562588 0.0473580890509818 1.0317601060031972e-08 7.986421268551901 0.4729238266636331 RRQEIEQK ddPTM_KYSE-520_SHP099_60min_R1 2 RRQEIEQK 8 2 Q9H307 Q9H307 PNN Pinin 0 ; 170.24 8.6475e-05 1025400000.0 707080.0 639360.0 339080.0 324700.0 717620.0 656840.0 426650.0 498080.0 496030.0 460700.0 False True 667856.8628709649 608644.1859010747 360937.6393471822 355559.3903753851 774092.6113007329 652740.4179175727 469779.94570273644 496352.27673274605 405963.4558987284 456618.55641917617 1.46261437140954 1.3329379135926724 0.7904576681632736 0.7786792397656773 1.6952719078506204 1.4295091794700443 1.028823597067041 1.0870173140250006 0.8890647350872304 1.0 18.8006299645512 -6.930952595655078 13.259832090615719 1.004399581771563 1.2302759968057912 0.16427874637946083 0.27165473754598146 2.230086252380521 423.784295247568 0.12575138841156586 0.08477786490727476 1.1723233206304503e-07 6.930952595655078 0.22587641503422828 RRQELEEK ddPTM_KYSE-520_SHP099_60min_R1 1 RRQELEEK 8 2 Q8IVD9 Q8IVD9 NUDCD3 NudC domain-containing protein 3 0 120.15 0.00062865 161150000.0 121350.0 126560.0 91859.0 80000.0 126610.0 109470.0 81241.0 114540.0 110550.0 70918.0 False True 114618.47359477227 120479.86762956715 97780.37811959667 87603.17594712302 136573.48668764235 108786.75712416517 89453.63311575286 114142.68747383691 90476.9067387144 70289.72169336911 1.630657667059521 1.7140467301200426 1.3911049263525672 1.2463155897711742 1.943007930568122 1.5476908216927503 1.2726417314039757 1.6238887382677565 1.2871996724273513 1.0 16.10102612224529 -8.393278787222457 0.6646916424369681 0.9880686073997305 1.5664886449821798 0.42086089646348435 0.1996348215624004 1.4440836136376654 1.1990720456079136 0.22933537055761335 0.0812658201303173 4.043162651084395e-09 8.393278787222457 0.5784200375824493 RRQFDEES(ph)LES(ph)FSS(ph)MPDPVDPTTVTK ddPTM_KYSE-520_SHP099_60min_R1 1 RRQFDEESLESFSSMPDPVDPTTVTK 26 2 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 3 RRQFDEES(0.859)LES(0.581)FS(0.581)S(0.979)MPDPVDPTTVTK 87.749 0.0035775 150680000.0 205140.0 243370.0 240620.0 164040.0 166790.0 191080.0 132170.0 149800.0 253380.0 169250.0 True False 193760.4752635484 231678.13989418247 256130.75020561228 179630.31227957542 179915.42409471486 189887.39884247305 145531.03345489438 149280.37876358282 207372.57919000866 167750.57667450747 1.1550510233983213 1.3810869952698641 1.5268546629356277 1.0708178525556942 1.0725174700520481 1.1319627187387764 0.8675441619331868 0.8898948768041314 1.2361959243358145 1.0 17.355958200409347 -5.3848033803854065 6.270025072843875 1.0285349563689512 1.3555979868983474 0.5495275018242818 0.13127997537939637 0.17686780009985487 8.302218806614418 0.038170953726863695 0.056883813755332684 4.122841316453046e-06 5.3848033803854065 0.3270630305293962 RRRT(ph)PT(ph)PPPR ddPTM_KYSE-520_SHP099_60min_R1 4 RRRTPTPPPR 10 3 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRRT(1)PT(1)PPPR;RRRT(1)PT(1)PPPR;RRRT(1)PT(1)PPPR;RRRT(1)PT(1)PPPR 72.089 0.014363999999999998 762477000.0 245930.0 251285.0 178789.0 208080.0 160725.0 190515.0 145641.0 204738.0 207956.0 122782.0 True False 232287.77265069936 239212.89141352536 190314.02501251438 227855.86063846655 173373.1430998444 189325.92521704888 160363.81359918462 204027.81166420848 170196.43254415266 121694.24700295039 1.9087818723679495 1.96568775685613 1.5638703529502127 1.872363453902158 1.4246617845101675 1.555750825365301 1.3177600219285364 1.6765608620698558 1.3985577522002857 1.0 16.892901441859905 -1.0000000000423952 0.061539578679067 0.22229496337086863 4.470452716483791 0.7207782750063656 0.15070248258707347 172.24114080592636 0.7923333174658156 10.837471626197214 65.19914599954245 0.09999999999023815 1.0000000000423952 4.248157753112922 RRS(ph)AEDELAMR ddPTM_KYSE-520_SHP099_60min_R1 1 RRSAEDELAMR 11 2 A3KFL2;Q13868-3;Q13868-2;Q13868;A3KFL1;A3KFL5 A3KFL2 EXOSC2 Exosome complex component RRP4 1 RRS(1)AEDELAMR 51.405 0.057074 136730000.0 156880.0 165630.0 156440.0 127770.0 137260.0 168470.0 142680.0 138340.0 155410.0 141720.0 True False 148177.55366747337 157672.8861843015 166524.37271285008 139913.2223845488 148061.58109743122 167418.5162392264 157103.48682260962 137860.13082879866 127191.46156728713 140464.47105649166 1.0549112708214996 1.1225108028982573 1.1855266421490862 0.9960755295072363 1.054085634493894 1.1918922627195485 1.1184571133253056 0.9814590820859918 0.905506286469648 1.0 17.09984573717794 -7.339672289071493 4.518878753070387 0.9514370324548921 1.1046297101652836 0.5372350344581214 0.060176132044167815 0.1786276973059402 6.722263048963712 0.036226922508085645 0.01664061702925461 4.574332304362209e-08 7.339672289071493 0.15319267771039147 RRS(ph)AS(ph)PPPATSSSSSSR ddPTM_KYSE-520_SHP099_60min_R1 1 RRSASPPPATSSSSSSR 17 2 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 RRS(0.986)AS(0.996)PPPAT(0.004)S(0.003)S(0.002)S(0.001)S(0.001)S(0.001)S(0.006)R 66.44800000000001 0.025144 64099000.0 47735.0 53428.0 53017.0 44352.0 45271.0 43991.0 44878.0 42452.0 59526.0 41353.0 True False 45087.04439263666 50861.238682937044 56434.56065019926 48567.20074508498 48833.57014324503 43716.43585136708 49414.706207072275 42304.74392037129 48717.57892834655 40986.64459214719 1.1000423391885825 1.2409222367200503 1.3769012128651243 1.184951860011253 1.191450791573245 1.0666019696509361 1.205629460493574 1.032159239706991 1.1886208157103098 1.0 15.32286626685287 -5.9573465727881025 2.2293994794457195 1.107125308348099 1.2400413116574365 0.3184011670583127 0.08750968990986822 0.3761862029985925 3.7852915175461956 0.030582169936959572 0.03439529385839437 1.1031979018990204e-06 5.9573465727881025 0.1329160033093375 RRS(ph)DEFRPQNYHQQDFR ddPTM_KYSE-520_SHP099_60min_R1 1 RRSDEFRPQNYHQQDFR 17 3 O14647 O14647 CHD2 Chromodomain-helicase-DNA-binding protein 2 1 RRS(1)DEFRPQNYHQQDFR 136.92 8.7495e-06 724670000.0 124080.0 121270.0 122720.0 120660.0 110850.0 116930.0 112530.0 144430.0 149990.0 79271.0 True False 117197.0350526522 115444.0071700189 130630.72755894241 132127.49012224827 119573.26434977599 116200.1964970189 123905.63058696574 143929.00604021558 122755.59694020581 78568.72061190482 1.491650037570987 1.4693380046273363 1.6626301986537515 1.681680560574486 1.521893998254289 1.4789625641353783 1.5770351053443452 1.831886849108337 1.5623978090029602 1.0 16.2616674477625 -8.054628415467652 23.516790728148976 0.9999999993148685 1.5915955186302855 0.7318790669572124 0.10658032322239892 6404.198457710018 2756914.2327492484 0.11000703348703364 0.02840369383134825 8.818030254156638e-09 8.054628415467652 0.591595519315417 RRS(ph)DSTLFSTVDTDEIPAK ddPTM_KYSE-520_SHP099_60min_R1 1 RRSDSTLFSTVDTDEIPAK 19 2 Q9HC62;F8WED6;F8WCX8;F8WED7;F8WET6 Q9HC62 SENP2 Sentrin-specific protease 2 1 RRS(0.745)DS(0.127)T(0.127)LFS(0.001)TVDTDEIPAK 160.92 4.4593999999999993e-07 0.0 276250.0 333990.0 311460.0 295750.0 281130.0 276340.0 253740.0 211510.0 358370.0 315190.0 True False 260925.8618092778 317944.6190707897 331537.2099536198 323857.99107952026 303253.33158910763 274615.2595568817 279390.5154637577 210776.3211768053 293299.0417725288 312397.6618141094 0.8352362828007988 1.017756078020779 1.0612666177728924 1.0366850673556904 0.9707285574037264 0.8790567060015002 0.8943425307389385 0.6747051816995565 0.9388643950448478 1.0 18.253024129895536 -6.297325585975081 2.544438658602075 0.8523996940738978 0.996265179708605 0.21579481581217186 0.09739719502597287 0.36425398449005836 4.656627176059318 0.03715807212847352 0.03357913326134388 5.042831001147661e-07 6.297325585975081 0.14386548563470714 RRS(ph)EVVESTTESQDKENSHQK ddPTM_KYSE-520_SHP099_60min_R1 3 RRSEVVESTTESQDKENSHQK 21 3 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RRS(1)EVVESTTESQDKENSHQK;RRS(1)EVVESTTESQDKENSHQK;RRS(1)EVVESTTESQDKENSHQK 296.35 1.6273e-44 2342570000.0 574051.0 522710.0 544433.0 794010.0 637780.0 658529.0 794690.0 904080.0 980070.0 613046.0 True False 542207.2466877021 497598.2269962945 579528.0223036 869472.4716721884 687969.6575281926 654418.8762420705 875025.0206269948 900943.9574938575 802113.9935541549 607614.889382571 0.8923534563787057 0.8189368557145298 0.9537752158978337 1.4309597853266969 1.1322462131026352 1.0770290321671667 1.4400980553918834 1.482754904853226 1.3201025971717457 1.0 19.21279769742889 -5.119677201654485 4.9783270750112685 1.2815357113548738 0.8623154466276695 0.5654101894845169 0.15392122062887525 0.16152575806408073 5.87571382904919 0.043858175954056666 0.07861159753589848 7.5914161307333956e-06 5.119677201654485 -0.4192202647272043 RRS(ph)FPDIEDEEK ddPTM_KYSE-520_SHP099_60min_R1 1 RRSFPDIEDEEK 12 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RRS(1)FPDIEDEEK 92.95200000000001 0.0020754000000000002 0.0 187560.0 202140.0 190280.0 174650.0 189280.0 199880.0 185440.0 214040.0 275700.0 192820.0 True False 177155.67290840944 192428.89098167437 202545.75325876448 191248.68348956277 204175.2591441195 198632.47477827847 204186.0849199941 213297.54519731156 225639.82983142044 191111.76481168997 0.9269741875021037 1.0068919156875675 1.0598288046700886 1.0007164324917814 1.0683552597889592 1.0393524175447753 1.0684119060968684 1.116087988656701 1.180669489676642 1.0 17.544057067577103 -1.9341204321525498 0.38314484506771024 1.093024791302766 8.972328859028264e-14 0.4671189018394569 0.0485007873273315 29.394743118039322 0.7929690830752649 0.03765099621379656 21.307950348867024 0.011638032558723782 1.9341204321525498 -1.0930247913026763 RRS(ph)FS(ph)IS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 RRSFSISPVR 10 2 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2;H7C2G8 P18583-10 SON Protein SON 3 RRS(1)FS(1)IS(1)PVR 52.861999999999995 0.039824 2684600000.0 1420300.0 1234100.0 1139600.0 1100400.0 1200200.0 1171600.0 1229300.0 1206800.0 1348400.0 1117500.0 True False 1341513.127702145 1174811.9835781348 1213060.4394244682 1204981.6851526776 1294648.9117961314 1164287.6098170467 1353569.6408118452 1202613.8924692383 1103564.550397851 1107599.819401844 1.211189370206493 1.0606827150013338 1.0952154543322135 1.0879215254869077 1.1688778646563005 1.0511807508652509 1.2220746311992328 1.0857837563739459 0.9963567446172281 1.0 20.07900529290503 -7.668703545994196 4.2029943841087 0.9975278121360361 1.1232113442365186 0.4567217498716386 0.055652027738334484 0.19039807066558953 5.9124942565899605 0.04151871418679003 0.013714265471422092 2.1443538602656916e-08 7.668703545994196 0.12568353210048244 RRS(ph)FSR ddPTM_KYSE-520_SHP099_60min_R1 1 RRSFSR 6 2 P84103;A0A2R8Y880;Q7Z6E9;H3BSK8 P84103;A0A2R8Y880 SRSF3;RBBP6 Serine/arginine-rich splicing factor 3;E3 ubiquitin-protein ligase RBBP6 1 RRS(0.989)FS(0.011)R 70.816 0.030292000000000003 393060000.0 98728.0 84067.0 81577.0 78718.0 72930.0 107050.0 88062.0 86229.0 108200.0 67211.0 True False 93251.36103061144 80028.29513286037 86835.58394781499 86199.33505257023 78669.17608506235 106381.86124181878 96964.1663622977 85929.89172499983 88553.60750003526 66615.56282936677 1.3998434760578584 1.2013453273351424 1.3035329922865178 1.2939819374245407 1.180942901984788 1.5969520743120025 1.4555782799684172 1.289937186976953 1.3293231151834888 1.0 16.0235716408379 -8.650063209974709 1.8353304839190088 1.0000063998336401 1.3394591662274244 0.43726889934829694 0.11548631174883903 9.201933488928242 24.611322561883785 0.11763258965212432 0.0328470055074164 2.238395324599133e-09 8.650063209974709 0.3394527663937843 RRS(ph)ILEK ddPTM_KYSE-520_SHP099_60min_R1 2 RRSILEK 7 2 P98174 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 1 RRS(1)ILEK;RRS(1)ILEK 111.27 0.0022302 2392800000.0 1715430.0 1634570.0 1496120.0 1347780.0 1297660.0 1241760.0 1335030.0 1432520.0 1768180.0 1398270.0 True False 1620271.678275074 1556042.8036604102 1592562.2890766372 1475872.605975167 1399778.4593245871 1234009.7152325164 1469987.8610372064 1427550.9224726832 1447123.0841904995 1385882.4156375981 1.1691263703130552 1.122781259147824 1.1491323297755767 1.0649334960326828 1.0100268561965957 0.8904144401491593 1.0606872880776932 1.030066408495352 1.0441889354117582 1.0 20.40237342739616 -5.472945715932132 2.627068928895519 1.0046345029542338 1.1455412334475759 0.6695171879899539 0.04433564975770299 0.1796078309560219 2.453751055534688 0.014386833248652661 0.022035390294186007 3.365536338255871e-06 5.472945715932132 0.14090673049334201 RRS(ph)LS(ph)PKPR ddPTM_KYSE-520_SHP099_60min_R1 1 RRSLSPKPR 9 3 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 RRS(1)LS(1)PKPR 72.089 0.046171 791440000.0 396780.0 353280.0 66650.0 1067400.0 207960.0 362840.0 297980.0 781800.0 145060.0 114710.0 True False 374769.82243868016 336307.89851590915 70946.36564377043 1168845.3750744867 224325.2688694584 360575.38097133604 328102.72640455054 779088.118273492 118720.76066501938 113693.75864302948 3.2963095504245357 2.958015484137819 0.6240128437175221 10.280646792093263 1.973065817744532 3.1714615232613985 2.8858464204241208 6.85251439984175 1.0442152857112716 1.0 16.794793532344208 -7.927401021405879 24.986453922657788 0.9999313517918926 3.9348690694241713 0.1756599724605441 2.5814188138143073 63.38906573335143 21814.4396938259 2.4281720726834046 0.6269513451977023 1.1819496560202889e-08 7.927401021405879 2.9349377176322786 RRS(ph)PDDELLYLPVR ddPTM_KYSE-520_SHP099_60min_R1 1 RRSPDDELLYLPVR 14 2 Q9H3D4-10;Q9H3D4-12;Q9H3D4-2;Q9H3D4-9;Q9H3D4-11;Q9H3D4;Q9H3D4-8;Q9H3D4-4;Q9H3D4-7;Q9H3D4-3;Q9H3D4-6;Q9H3D4-5 Q9H3D4-10 TP63 Tumor protein 63 1 RRS(1)PDDELLYLPVR 59.501999999999995 0.029851 249730000.0 101380.0 101790.0 115630.0 102570.0 105290.0 124540.0 107870.0 118390.0 140610.0 133870.0 True False 95756.2493039805 96899.85561009508 123083.6948145414 112318.22196120497 113575.72398184871 123762.69966423274 118774.55230974851 117979.33272243373 115078.76848964844 132684.01594928393 0.7216863962014957 0.7303054170981176 0.9276452324263981 0.8465090625847245 0.85598648163665 0.932762690206323 0.895168505866961 0.8891751721437886 0.8673144814491839 1.0 17.01763505841065 -4.75374697417041 24.995387830871795 0.8951173872140423 0.7259957997176515 0.7294190844138332 0.04267909570073175 82.96144973221833 269565.2331356779 0.010390380351341374 0.026406295322590638 1.763002896548192e-05 4.75374697417041 -0.16912158749639083 RRS(ph)PGLCSDSLEK ddPTM_KYSE-520_SHP099_60min_R1 4 RRSPGLCSDSLEK 13 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RRS(1)PGLCSDSLEK;RRS(1)PGLCSDSLEK;RRS(0.999)PGLCS(0.001)DSLEK;RRS(0.991)PGLCS(0.009)DSLEK 156.83 1.7083000000000002e-06 7270910000.0 4380630.0 4464080.0 4437070.0 3765390.0 4075610.0 3547000.0 3482330.0 3547560.0 5427460.0 3455480.0 True False 4137627.7213305947 4249618.896079314 4723090.631763014 4123251.5334942117 4396337.319951201 3524861.857307154 3834357.9006656744 3535254.342366725 4441970.079132546 3424867.1355227567 1.2081133537751225 1.2408127754803167 1.3790580611945702 1.2039157638343996 1.2836519333413976 1.0291966718204193 1.1195639856786488 1.032231091740474 1.2969758835489957 1.0 21.707616590495014 -6.250276699206207 24.86232259346337 1.099106123462466 1.2650245785683834 0.467984333075927 0.08925390653822463 612.3173170683684 1363797.3049580161 0.028476272978203866 0.028223077497700755 5.619831584456851e-07 6.250276699206207 0.1659184551059174 RRS(ph)PGLLER ddPTM_KYSE-520_SHP099_60min_R1 1 RRSPGLLER 9 2 Q69YU3 Q69YU3 ANKRD34A Ankyrin repeat domain-containing protein 34A 1 RRS(1)PGLLER 67.214 0.024509 0.0 111460.0 110740.0 106380.0 95010.0 106180.0 120040.0 97943.0 99620.0 121410.0 95559.0 True False 105277.09160999858 105419.88417587109 113237.42501401796 104039.72183420185 114535.76191844138 119290.78583342285 107844.0342715646 99274.44147148277 99365.00449703592 94712.42160377692 1.1115447142764256 1.113052357766631 1.1955921208280278 1.0984802212052507 1.2093003217423166 1.2595051822502001 1.1386472064110333 1.048167070279237 1.0491232598055908 1.0 16.531266028167803 -7.245029586080732 3.6380602342260944 1.0326887554047532 1.1650282744871487 0.6017226142790406 0.04831449301756296 0.1759965497412459 5.09706487882504 0.028897533594201 0.014276986461094359 5.688141793602764e-08 7.245029586080732 0.1323395190823955 RRS(ph)PPADAIPK ddPTM_KYSE-520_SHP099_60min_R1 16 RRSPPADAIPK 11 2 M0R1Q8;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4;C9JW69;P18754;P18754-2 M0R1Q8 RCC1 Regulator of chromosome condensation 1 RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK;RRS(1)PPADAIPK 112.5 0.0019510999999999999 248875350000.0 93894890.0 79087870.0 83310130.0 80558970.0 82187070.0 78996890.0 75438380.0 76820960.0 93241380.0 76552300.0 True False 88686353.27687724 75288370.01188694 88680434.280721 88215270.2878624 88654724.82853915 78503841.10710144 83064427.65803915 76554486.01990688 76311095.81591155 75874106.17878826 1.1688619180290367 0.9922801572710312 1.1687839072760364 1.1626531728755218 1.1684450637169272 1.0346591882363203 1.0947664735886016 1.008967220510188 1.005759404085678 1.0 26.177104280271454 -6.974255511998322 1.2227000371066095 0.9993854186070339 1.124104091930659 0.4597443254789776 0.05566605202070138 0.470401778981767 1.337428557603955 0.04241034415997167 0.020113482639638358 1.0610711049448141e-07 6.974255511998322 0.12471867332362518 RRS(ph)PPPGPDGHAK ddPTM_KYSE-520_SHP099_60min_R1 16 RRSPPPGPDGHAK 13 2 P57081-3;P57081-2;P57081 P57081-3 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 1 RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK;RRS(1)PPPGPDGHAK 167.29 4.9209e-07 415287420000.0 5641871.0 4777548.0 5086096.0 5030649.0 5102529.0 4963084.0 4659564.0 4640251.0 5776044.0 4102039.0 True False 5328905.168838992 4548027.422834246 5413953.886201328 5508760.36844022 5504069.002881363 4932107.55179347 5130598.202082324 4624155.052323731 4727260.011820088 4065698.125798055 1.3106986805108611 1.1186338193619614 1.3316172816294922 1.35493590473073 1.3537820154320903 1.2131022518611974 1.261923055606899 1.1373581877567598 1.1627179061387336 1.0 21.95507166975475 -7.8034658205138765 0.8323707565574373 1.0070353144127602 1.2859628060869241 0.6156942129474269 0.06991157155277154 0.4125940830253209 0.6325927989468572 0.07004400705739641 0.02635560331488206 1.5722955290997213e-08 7.8034658205138765 0.278927491674164 RRS(ph)PPPR ddPTM_KYSE-520_SHP099_60min_R1 6 RRSPPPR 7 2 P84103;P84103-2 P84103 SRSF3 Serine/arginine-rich splicing factor 3 1 RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR;RRS(1)PPPR 72.243 0.019172 111108390000.0 1229591.0 1905824.0 279081.5 5950544.0 1802865.0 2468141.0 1691659.0 4616052.0 1337700.0 1815423.0 True False 1161383.1361011118 1814265.3543398557 297071.54003618803 6516081.912663714 1944740.2186013467 2452736.4165085847 1862668.4007208345 4600039.993006637 1094807.4006728008 1799339.7645977226 0.6454496026550948 1.0082950368995318 0.16510030283391428 3.6213738177016896 1.080807670048981 1.363131335596833 1.035195485238037 2.5565154972468838 0.6084495114337488 1.0 20.77903620194909 RRS(ph)PQEGPTWSR ddPTM_KYSE-520_SHP099_60min_R1 7 RRSPQEGPTWSR 12 2 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 RRS(1)PQEGPTWSR;RRS(0.999)PQEGPTWS(0.001)R;RRS(0.987)PQEGPT(0.011)WS(0.003)R;RRS(0.991)PQEGPTWS(0.008)R;RRS(1)PQEGPTWSR;RRS(0.781)PQEGPT(0.018)WS(0.201)R;RRS(1)PQEGPTWSR 100.68 0.0010295999999999999 41189600000.0 1633794.0 1427501.0 1514838.0 1300633.0 1513768.0 1305516.0 1277437.0 1403575.0 1796170.0 1151972.0 True False 1543164.1899324076 1358921.709237316 1612486.881306497 1424244.7692704306 1632892.9294382671 1297367.790387428 1406572.7985436914 1398706.3259218668 1470030.8057609822 1141766.424300654 1.3515585649469546 1.1901923898924178 1.412273865290937 1.2474046696046417 1.4301462143962012 1.1362812592620084 1.2319269235870502 1.225037184622583 1.2875057231266842 1.0 20.122836112346047 -6.277301241247244 24.99184405710357 1.1937010869293332 1.3191443422226101 0.3627392395297093 0.09791834812672823 1046.416314570963 1648721.767037274 0.0325615116549717 0.028811101854751154 5.28078831485393e-07 6.277301241247244 0.12544325529327693 RRS(ph)PRPS(ph)PVPK ddPTM_KYSE-520_SHP099_60min_R1 4 RRSPRPSPVPK 11 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 RRS(1)PRPS(1)PVPK;RRS(1)PRPS(1)PVPK;RRS(1)PRPS(1)PVPK;RRS(1)PRPS(1)PVPK 88.73 0.0049 3055310000.0 4167430.0 3204870.0 1329550.0 5111000.0 2156070.0 3202670.0 2939560.0 4554100.0 1807880.0 1312060.0 True False 3936254.350334259 3050903.2345920554 1415254.9203552161 5596747.903321819 2325740.442639801 3182680.9485598835 3236719.412140947 4538302.890034934 1479614.5649460598 1300436.169167235 3.0268724014766004 2.3460615037689805 1.0882924928653037 4.30374672438235 1.7884310647320305 2.4473949771775327 2.4889490840705055 3.4898313332373267 1.1377833068835403 1.0 20.31056415685122 -7.847074295477949 8.553433032987968 1.0307400850242217 2.578925551207591 0.3567986937890064 0.832994072867337 0.31961404799996107 28.145660681436738 0.7704372829143961 0.19933567122358553 1.422085487787542e-08 7.847074295477949 1.5481854661833694 RRS(ph)PS(ph)LSSK ddPTM_KYSE-520_SHP099_60min_R1 8 RRSPSLSSK 9 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(0.999)PS(0.844)LS(0.138)S(0.019)K;RRS(0.948)PS(0.991)LS(0.036)S(0.026)K;RRS(1)PS(0.916)LS(0.081)S(0.003)K;RRS(1)PS(0.987)LS(0.013)S(0.001)K;RRS(0.996)PS(0.918)LS(0.084)S(0.002)K;RRS(0.997)PS(0.967)LS(0.037)SK;RRS(1)PS(0.998)LS(0.002)SK;RRS(0.999)PS(0.837)LS(0.151)S(0.013)K 110.15 0.0026314 94044580000.0 28683120.0 25128960.0 24761990.0 23353690.0 25303660.0 24727250.0 23780350.0 25772570.0 29399730.0 23629610.0 True False 27092010.15521787 23921727.04226208 26358187.49598486 25573217.676057093 27294914.08386882 24572918.060642354 26184299.851850636 25683170.97003308 24061480.13888177 23420270.038958423 1.1567761648414683 1.0214112391731398 1.125443363895436 1.0919266786214399 1.1654397681352575 1.049215829696522 1.118018699540799 1.0966214705172244 1.0273784247088835 1.0 24.48125437462027 -7.838847020662603 3.234649125239163 1.001206178378731 1.1020784729675486 0.4329878282378019 0.0415177371875865 0.21073490484985488 4.105153521857008 0.03684052428690595 0.010028140774215334 1.4492822703397051e-08 7.838847020662603 0.10087229458881763 RRS(ph)PS(ph)PAPPPR ddPTM_KYSE-520_SHP099_60min_R1 12 RRSPSPAPPPR 11 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR;RRS(1)PS(1)PAPPPR 107.21 0.0013764 42760190000.0 3665210.0 3349490.0 3262230.0 3152540.0 3190420.0 3417060.0 3160450.0 3288240.0 3840700.0 3134790.0 True False 3461893.4948850097 3188575.47271301 3472518.5655525485 3452156.453754288 3441487.9029933484 3395732.8610459506 3479939.1290196045 3276833.8629209874 3143325.6961680674 3107018.199429716 1.1142173211345945 1.0262493709558134 1.1176370213054816 1.1110834350400398 1.1076497407144328 1.092923389270532 1.120025344447077 1.0546555097496502 1.0116856401887235 1.0 21.567099261427668 -7.601342013960281 2.7839542607529246 1.0032563552977338 1.0970264226915536 0.6710383899116832 0.025964187641159285 0.1661755277919174 2.436146222094697 0.02210756949374094 0.007031771360810393 2.5041364281975147e-08 7.601342013960281 0.09377006739381977 RRS(ph)PS(ph)PAPPPRR ddPTM_KYSE-520_SHP099_60min_R1 3 RRSPSPAPPPRR 12 3 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(1)PS(1)PAPPPRR;RRS(1)PS(1)PAPPPRR;RRS(1)PS(1)PAPPPRR 116.78 0.00032424 17324000000.0 536600.0 423040.0 83385.0 700720.0 202496.0 362705.0 324799.0 662720.0 141372.0 89066.0 True False 506833.7283144196 402716.52340401436 88760.1305207173 767316.2181208507 218431.2831553657 360441.2235564116 357632.8526527666 660421.1790000114 115702.40849810527 88276.94453229941 5.741405425841122 4.561967176567439 1.0054735241571608 8.692147447854852 2.4743865378739347 4.083073167813718 4.051259981273064 7.4812419312765375 1.3106752744004548 1.0 16.429749075043894 -7.888802462459773 9.566422485899688 1.0102603655803704 4.6360271963513995 0.31876965469423 2.104347768713123 0.3298544055748608 25.396796793890907 1.9340191331892562 0.49973516165806964 1.2918067144082961e-08 7.888802462459773 3.6257668307710293 RRS(ph)PS(ph)PKPTK ddPTM_KYSE-520_SHP099_60min_R1 6 RRSPSPKPTK 10 3 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 RRS(1)PS(0.894)PKPT(0.106)K;RRS(1)PS(0.993)PKPT(0.008)K;RRS(1)PS(0.999)PKPT(0.001)K;RRS(1)PS(0.993)PKPT(0.007)K;RRS(1)PS(0.81)PKPT(0.19)K;RRS(0.992)PS(0.88)PKPT(0.127)K 107.99 0.0020456 32550990000.0 14215210.0 11971380.0 5039630.0 14673710.0 8684010.0 12436520.0 10215650.0 15190700.0 7456920.0 6954220.0 True False 13426663.963981407 11396256.935392287 5364492.613493105 16068294.986588221 9367392.181741985 12358899.065587148 11248347.597136188 15138007.007236026 6102931.301655838 6892611.021101285 1.9479793539598478 1.6534020127500855 0.7782961488861125 2.3312348451691487 1.3590484292620484 1.7930649252875541 1.63194289692253 2.196265966684032 0.8854309757176355 1.0 22.716619169615832 -7.785898529334132 24.97771111273148 0.9427140915000258 1.6873564611813727 0.35657193389534203 0.4120231583959838 286.80046110055946 292872.5395418136 0.38105822974371356 0.09857756063907244 1.6371989998466453e-08 7.785898529334132 0.7446423696813469 RRS(ph)PS(ph)PPPTR ddPTM_KYSE-520_SHP099_60min_R1 2 RRSPSPPPTR 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(1)PS(1)PPPTR;RRS(1)PS(0.997)PPPT(0.003)R 56.482 0.030548000000000002 1219430000.0 271030.0 241375.0 251030.0 266890.0 266360.0 260460.0 252020.0 256100.0 321150.0 255910.0 True False 255995.42561509012 229778.98268873832 267211.79546220094 292255.1453565952 287321.01661891135 258834.37252726883 277496.64107817574 255211.6488741891 262837.2555326828 253642.83649496757 1.0092752042700375 0.905915522251689 1.0534963224459233 1.1522310245193688 1.1327779668029851 1.02046789928721 1.0940448581668556 1.006185123936085 1.0362494725448226 1.0 17.952438890182332 -4.86466170559638 6.990757811516488 1.0684359642805232 0.9584478172661117 0.37188110754615344 0.05396076708646795 0.20539359277843747 12.08683786415216 0.014597335628776076 0.030853389581763924 1.3656464949744662e-05 4.86466170559638 -0.10998814701441151 RRS(ph)PS(ph)PPPTRR ddPTM_KYSE-520_SHP099_60min_R1 3 RRSPSPPPTRR 11 3 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(1)PS(1)PPPTRR;RRS(1)PS(1)PPPTRR;RRS(1)PS(1)PPPTRR 80.128 0.022994 3793830000.0 385835.0 309715.0 67025.7 738740.0 158609.0 287341.0 196844.0 599800.0 106065.0 98359.0 True False 364431.9634069964 294835.82650830725 71346.28386691168 808949.6274897204 171090.6259382378 285547.5982352681 216742.9125323084 597719.4337943719 86806.26968106507 97487.61578214396 3.7382385494111814 3.024341339593106 0.7318497154176953 8.297973245109246 1.7549985663879075 2.9290653581413117 2.2232866276744816 6.131234506033037 0.8904338154607397 1.0 16.57293133908378 -7.859200681977478 24.99981231667718 0.9448420031669895 3.515453390341891 0.2078147870707162 2.070577589030251 24.998028804691696 6377.204328928186 1.9189126679351969 0.49546119607520667 1.3829271981682077e-08 7.859200681977478 2.5706113871749015 RRS(ph)PS(ph)PTPTPGPSR ddPTM_KYSE-520_SHP099_60min_R1 5 RRSPSPTPTPGPSR 14 2 F8WD88;P49450-2;P49450 F8WD88 CENPA Histone H3-like centromeric protein A 2 RRS(0.971)PS(0.551)PT(0.308)PT(0.169)PGPS(0.001)R;RRS(0.759)PS(0.643)PT(0.537)PT(0.06)PGPSR;RRS(0.963)PS(0.471)PT(0.198)PT(0.331)PGPS(0.038)R;RRS(0.988)PS(0.935)PT(0.073)PT(0.004)PGPSR;RRS(0.999)PS(0.987)PT(0.014)PTPGPSR 108.13 0.00027074 8087170000.0 1008109.0 1419589.0 846071.0 992144.0 1325304.0 1314667.0 1276582.0 784808.0 1268205.0 1008266.0 True False 952187.1841545324 1351389.8135934689 900610.090421464 1086437.0674610296 1429597.884851743 1306461.6756020386 1405631.3667996973 782085.6842235647 1037930.9408464162 999333.5476590778 0.9528221947366973 1.3522910511301027 0.9012107044050789 1.0871616088602152 1.4305512791005088 1.3073329507074023 1.4065687778543663 0.7826072546604559 1.0386231336651832 1.0 19.93060676130172 -7.267689898871488 24.98337362811892 0.9329614049367198 1.2073985883945848 0.30748183463627166 0.18213420433073346 646.2224729403231 2582936.670084826 0.0992482960625166 0.04953128848510059 5.3989598913630575e-08 7.267689898871488 0.27443718345786505 RRS(ph)PS(ph)PYYSR ddPTM_KYSE-520_SHP099_60min_R1 8 RRSPSPYYSR 10 2 P62995;P62995-3;H7BXF3;Q13595;Q13595-3 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RRS(0.941)PS(0.805)PY(0.112)Y(0.112)S(0.028)R;RRS(0.953)PS(0.989)PY(0.038)Y(0.003)S(0.016)R;RRS(1)PS(0.982)PY(0.016)Y(0.001)S(0.001)R;RRS(0.913)PS(0.902)PY(0.101)Y(0.022)S(0.062)R;RRS(0.999)PS(0.998)PY(0.002)YSR;RRS(0.664)PS(0.972)PY(0.32)Y(0.016)S(0.027)R;RRS(0.982)PS(0.967)PY(0.046)Y(0.003)S(0.002)R;RRS(0.999)PS(0.995)PY(0.004)YS(0.003)R 133.15 0.001605 226023320000.0 32405010.0 31848010.0 27844180.0 29380690.0 27734760.0 29496530.0 29171410.0 32046740.0 36116710.0 26555670.0 True False 30607439.497514103 30317983.794762418 29639060.395063188 32173021.94397341 29917327.822801918 29312431.215087753 32120340.80832589 31935577.338705353 29558825.892168168 26320407.423798654 1.1628786365152979 1.1518812496553223 1.1260866869508959 1.222360331507744 1.1366589939542868 1.1136769557975663 1.2203587995861718 1.2133390195863578 1.1230383107763509 1.0 24.64967848549383 -8.021423568407787 20.789013979967574 0.9999999983912551 1.1671601137641678 0.6528342489762027 0.037066458123726095 108.78067339525909 105559.59607415441 0.03690196342741518 0.009528045990128542 9.518673527414075e-09 8.021423568407787 0.16716011537291275 RRS(ph)PS(ph)YSR ddPTM_KYSE-520_SHP099_60min_R1 3 RRSPSYSR 8 2 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 2 RRS(0.99)PS(0.744)Y(0.036)S(0.23)R;RRS(0.998)PS(0.805)Y(0.135)S(0.062)R;RRS(0.985)PS(0.428)Y(0.159)S(0.428)R 72.531 0.015595 1388900000.0 341252.0 319694.0 307173.0 321488.0 314568.0 340580.0 303970.0 315346.0 368091.0 318035.0 True False 322322.0712910036 304335.4203695229 326973.86307417764 352042.12286110857 339322.71195291274 338454.31388826325 334698.25406131626 314252.13832830946 301254.9532189971 315217.45732748625 1.022538770611731 0.9654776830882885 1.037296175936339 1.1168230523963791 1.076471826242742 1.0737169088215686 1.0618011353146313 0.9969376093336928 0.9557051686576382 1.0 18.265987910571095 -7.38598126706846 4.222517284547527 0.977507070095018 1.0511230158016949 0.3863936950227498 0.03869417571491804 0.27334678206579244 8.006940035011509 0.026471793483049094 0.011781942542370055 4.111674560885297e-08 7.38598126706846 0.07361594570667684 RRS(ph)PSACPQVSR ddPTM_KYSE-520_SHP099_60min_R1 4 RRSPSACPQVSR 12 2 Q9NRC8-3 Q9NRC8-3 1 RRS(0.999)PS(0.001)ACPQVSR;RRS(0.957)PS(0.041)ACPQVS(0.002)R;RRS(0.993)PS(0.007)ACPQVSR;RRS(0.997)PS(0.003)ACPQVSR 114.28 0.00012161 1563530000.0 94361.0 80310.0 97022.0 108946.0 94656.0 86738.0 75249.9 83099.0 106076.0 74158.0 True False 89126.60722601006 76451.7870522324 103276.19336068857 119300.19508419074 102104.88868103197 86196.63596817259 82856.89426025149 82810.74896445232 86815.27235835236 73501.01781405097 1.2125901093164455 1.0401459643136715 1.4050988194743825 1.6231094293960169 1.3891629220610995 1.1727271068033378 1.127289073327798 1.1266612548679786 1.1811438118855022 1.0 16.165476607527253 -6.398986272907682 4.4461958939566735 1.12293317020659 1.3368887577949375 0.35169585847330653 0.14551644499592706 0.32302723411459294 10.239007083904925 0.06021195250462109 0.05235832076314739 3.9903751486003494e-07 6.398986272907682 0.21395558758834765 RRS(ph)PSLS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 RRSPSLSSK 9 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(0.999)PS(0.443)LS(0.529)S(0.029)K 80.37899999999999 0.008277600000000001 1693700000.0 1757600.0 1660200.0 1754700.0 1638600.0 1594000.0 1621000.0 1573500.0 1839000.0 2011800.0 1476000.0 True False 1660102.4243112626 1580441.4999889943 1867810.769619268 1794332.051336948 1719438.7313806326 1610882.7377205815 1732564.7358801232 1832620.9382258288 1646507.8333509334 1462923.7883106235 1.134783942660704 1.080330713477617 1.276765600876725 1.2265382965773173 1.1753440234683936 1.1011392053312772 1.1843164693363006 1.252711147955376 1.1254911886095664 1.0 20.480423182894747 -8.01571405213447 23.712669595858465 0.9999999957659527 1.1787007840933788 0.45698512775142697 0.059200195833743106 447.06731550844967 674630.5070613704 0.06008850552037281 0.015514785411286364 9.64463836211331e-09 8.01571405213447 0.17870078832742609 RRS(ph)PSLSS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 RRSPSLSSK 9 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(0.755)PS(0.251)LS(0.009)S(0.985)K 128.61 0.0031177 4906900000.0 5130100.0 4281600.0 4238900.0 4346400.0 4174500.0 4240800.0 4306900.0 4541100.0 5129600.0 4036700.0 True False 4845523.126399186 4075905.509187373 4512146.276479804 4759480.549207185 4503009.400344075 4214331.594155112 4742283.4832933685 4525347.984000702 4198193.9466929855 4000937.9785050806 1.2110967859116073 1.0187374888301326 1.1277721126198843 1.1895911845615583 1.125488429097466 1.0533358969312903 1.1852929260016387 1.1310717657491816 1.0493024308918701 1.0 21.931906833899546 -7.919177945769715 3.368738007170457 1.0012807582365333 1.1276131613208205 0.37428585422710225 0.05623544491143645 0.22972749114423027 5.1422367419396 0.05283778246906057 0.014097670110524794 1.204542295776035e-08 7.919177945769715 0.12633240308428717 RRS(ph)PSLSSK ddPTM_KYSE-520_SHP099_60min_R1 3 RRSPSLSSK 9 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RRS(0.99)PS(0.01)LSSK;RRS(0.995)PS(0.005)LSSK;RRS(0.988)PS(0.012)LSSK 143.55 0.00027973 9501800000.0 681000.0 816080.0 203611.0 2729300.0 576090.0 716980.0 668240.0 1829650.0 641140.0 515680.0 True False 643223.572460156 776874.2918389472 216736.09084911883 2988691.8514060327 621425.0054962786 712505.0618697732 735792.2205939204 1823303.3711935193 524725.1378241457 511111.4763929688 1.2584800032265617 1.519970354259168 0.4240485703406139 5.84743639978096 1.2158306635605558 1.394030646500222 1.4395924462244036 3.5673301332636678 1.026635405503417 1.0 18.96327846011917 RRS(ph)PSPAPPPR ddPTM_KYSE-520_SHP099_60min_R1 6 RRSPSPAPPPR 11 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RRS(0.968)PS(0.032)PAPPPR;RRS(1)PSPAPPPR;RRS(1)PSPAPPPR;RRS(0.983)PS(0.017)PAPPPR;RRS(0.989)PS(0.011)PAPPPR;RRS(0.928)PS(0.072)PAPPPR 114.21 0.00034499 2834042000.0 266737.0 211578.0 206027.0 232599.0 192275.0 222294.0 215625.0 218753.0 232474.0 158622.0 True False 251940.56688297307 201413.4752949475 219307.83007485524 254705.13902656044 207405.94860490036 220906.58069022736 237422.4792972052 217994.19690033427 190262.5817926359 157216.7324860487 1.6025047900377276 1.2811198408084252 1.3949394991675994 1.620089255125327 1.3192358429361544 1.405108586071336 1.5101603725180708 1.3865839434086884 1.2101929532819902 1.0 17.262395245404846 -7.955868947382016 2.11032706072753 1.0022288647890705 1.4402654265148551 0.6543476292156538 0.10371502464706121 0.18119050513468482 1.81999121637917 0.09651515244342151 0.02696185756229933 1.1069577689435339e-08 7.955868947382016 0.43803656172578465 RRS(ph)PSPGS(ph)QGPAGSGR ddPTM_KYSE-520_SHP099_60min_R1 1 RRSPSPGSQGPAGSGR 16 2 Q9Y5B0-4 Q9Y5B0-4 CTDP1 RNA polymerase II subunit A C-terminal domain phosphatase 2 RRS(0.809)PS(0.56)PGS(0.629)QGPAGS(0.001)GR 51.001000000000005 0.063976 463640000.0 286110.0 243110.0 210520.0 231230.0 244820.0 259010.0 244870.0 236170.0 308700.0 262460.0 True False 270238.9079538554 231430.6306844507 224090.45604390942 253206.02967816548 264085.9411647466 257393.4225151189 269623.8493009002 235350.78139249212 252647.8616937232 260134.80859079014 1.0388417813740556 0.8896565282368917 0.8614397175751248 0.9733646606151655 1.0151887884415032 0.9894616714674904 1.0364773970908174 0.904726217407971 0.9712189732022967 1.0 17.98889993339215 -5.497633235785187 24.648609817429517 0.9850199077490642 0.9245229044322857 0.17882977662724509 0.05357580403653825 1021.6779402673463 997520.8666140734 0.015385788257065788 0.022706599144608475 3.179558092448224e-06 5.497633235785187 -0.06049700331677854 RRS(ph)PSPKPT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 RRSPSPKPTK 10 3 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 RRS(0.875)PS(0.46)PKPT(0.665)K 92.495 0.0038747 476110000.0 1358100.0 1144500.0 480990.0 1468100.0 844950.0 1099400.0 982030.0 1575700.0 752490.0 613920.0 True False 1282763.48569477 1089516.5020704765 511995.3850112101 1607627.7825996408 911442.7578921354 1092538.2367982771 1081303.1760892018 1570234.264471143 615856.7847292186 608481.1464225324 2.1081400684911484 1.790550961974935 0.8414317978813396 2.6420338445183247 1.4978981078556293 1.7955169904962234 1.7770528839661688 2.5805799796806923 1.0121213916816487 1.0 19.21485303666242 -7.846759545436084 13.977696567280276 1.0030119058668283 1.8480900012842765 0.3372504084391398 0.48802517082348923 1.207967407598631 194.06867834521265 0.45429047881273793 0.11730606451299398 1.4231165018154182e-08 7.846759545436084 0.8450780954174482 RRS(ph)PSPPPT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RRSPSPPPTR 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRS(0.995)PS(0.209)PPPT(0.796)R 72.175 0.057826999999999996 1005300000.0 350730.0 326590.0 307630.0 325830.0 297010.0 305720.0 296660.0 309130.0 340650.0 309610.0 True False 331274.3077370789 310900.12617841567 327460.3220254035 356796.78523563844 320382.9972442671 303811.8880789244 326649.28792259184 308057.70018148416 278796.5470876803 306867.09627293504 1.0795367498196533 1.0131425948055817 1.0671079630321536 1.1627078613807937 1.0440448035501033 0.9900438716593672 1.0644650139748513 1.0038798682654793 0.9085253859857034 1.0 18.227254436015883 -7.099965809579241 1.071102781005688 0.9593627732908979 1.069628112358634 0.42215595833400965 0.0486350986280007 0.5515349868203603 1.1488204240025823 0.04247404188477043 0.018463927626185667 7.943907717510392e-08 7.099965809579241 0.11026533906773606 RRS(ph)PSPT(ph)PTPGPSR ddPTM_KYSE-520_SHP099_60min_R1 1 RRSPSPTPTPGPSR 14 2 F8WD88;P49450-2;P49450 F8WD88 CENPA Histone H3-like centromeric protein A 2 RRS(0.728)PS(0.292)PT(0.946)PT(0.034)PGPSR 91.53399999999999 0.0065699 3501200000.0 151250.0 211490.0 172670.0 171880.0 203300.0 207670.0 234640.0 135060.0 202860.0 159820.0 True False 142859.86099060005 201329.70294703793 183800.5844817681 188215.42352239348 219298.55338123147 206373.85449872483 258359.70106572122 134591.50838324093 166025.7376844469 158404.11913807865 0.9018696089971695 1.2709878003332833 1.160327051353707 1.1881977851745682 1.3844245627859715 1.3028313633614013 1.6310163048254616 0.8496717706306577 1.048115027486909 1.0 17.273250326159964 -7.305396949028496 24.999583773201735 0.9616699895665054 1.262528543843951 0.3664728747578958 0.17884870886207832 524.5042289237415 298293.871650805 0.09879587285849323 0.04746037074225293 4.9499755180266635e-08 7.305396949028496 0.3008585542774457 RRS(ph)PSPTPTPGPSR ddPTM_KYSE-520_SHP099_60min_R1 2 RRSPSPTPTPGPSR 14 2 F8WD88;P49450-2;P49450 F8WD88 CENPA Histone H3-like centromeric protein A 1 RRS(0.987)PS(0.013)PTPTPGPSR;RRS(0.781)PS(0.217)PT(0.002)PTPGPSR 101.53 0.00087745 305280000.0 45985.0 64057.0 53088.0 46303.0 54761.0 48363.0 65843.0 46912.0 56181.0 28700.0 True False 43434.12038117517 60979.60556848278 56510.1374238033 50703.623198495436 59070.37915253126 48061.148577656066 72499.05300575476 46749.273221343086 45979.94660775855 28445.74032826213 1.5269112309944488 2.143716593935746 1.9865940127301915 1.7824680466522818 2.0765984105480344 1.6895727804245313 2.5486787184696214 1.643454263515707 1.6164088569027466 1.0 14.795925008622676 -8.043734411751862 1.7549886632948744 1.0110337267109923 1.9570528595964478 0.5205365536276003 0.27482311007433313 0.30448000867769026 2.1073601328107 0.24808127546266698 0.0708800146189067 9.042022601148614e-09 8.043734411751862 0.9460191328854555 RRS(ph)PSPYYS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 RRSPSPYYSR 10 2 P62995;P62995-3;H7BXF3;Q13595;Q13595-3 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RRS(0.909)PS(0.207)PY(0.169)Y(0.056)S(0.659)R;RRS(0.698)PS(0.336)PY(0.04)Y(0.062)S(0.864)R;RRS(0.981)PS(0.163)PY(0.194)Y(0.017)S(0.644)R;RRS(0.872)PS(0.156)PY(0.331)Y(0.105)S(0.537)R 101.2 0.0017928 182184400000.0 5200600.0 4840300.0 4472850.0 4672680.0 4309430.0 4861780.0 4607300.0 4741660.0 5479220.0 4201010.0 True False 4912112.350860923 4607764.722561583 4761177.067813039 5116770.102307526 4648557.62369739 4831435.827634274 5073050.846914837 4725212.288171764 4484331.767895964 4163792.319736326 1.179720786643841 1.106626932549165 1.1434713122566456 1.2288725540066197 1.1164239872539468 1.1603450548513974 1.2183726894515454 1.134833806617663 1.07698257346801 1.0 21.989466681487315 -7.9350817710378445 2.216251637786761 1.0017569992078816 1.1627239698511422 0.666130826375481 0.03708549691396541 0.17105164510781798 1.8576663657226364 0.035778482140747976 0.009948548627351861 1.1612299513380467e-08 7.9350817710378445 0.1609669706432606 RRS(ph)PSPYYSR ddPTM_KYSE-520_SHP099_60min_R1 4 RRSPSPYYSR 10 2 P62995;P62995-3;H7BXF3;Q13595;Q13595-3 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 1 RRS(0.992)PS(0.008)PYYSR;RRS(0.804)PS(0.032)PYYS(0.164)R;RRS(0.999)PS(0.001)PYYSR;RRS(0.997)PS(0.003)PYYSR 95.65899999999999 0.0021235 2019560000.0 392918.0 426133.0 404614.0 362673.0 370036.0 373213.0 331279.0 374444.0 492019.0 371240.0 True False 371122.0552773857 405660.93104132643 430696.0658452901 397141.33287838666 399155.72798316466 370883.63923066726 364767.9142914725 373145.1411598862 402680.75238964724 367951.10242034995 1.0086178648091486 1.1024859780903618 1.1705252763538667 1.0793318195434827 1.0848064467195597 1.0079699090205936 0.9913488827511626 1.0141161113674353 1.09438659033999 1.0 18.489154531526616 -6.186634689745398 4.808850411598064 1.0206048686957454 1.094978264264791 0.3559952700738115 0.0452132365872199 0.2507227968721984 10.806727491968509 0.01583231920416379 0.015730194834064702 6.506767821614772e-07 6.186634689745398 0.07437339556904554 RRS(ph)PSYS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 RRSPSYSR 8 2 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 2 RRS(0.995)PS(0.045)Y(0.058)S(0.902)R;RRS(0.995)PS(0.314)Y(0.098)S(0.592)R 77.67399999999999 0.010842000000000001 1549000000.0 308290.0 310570.0 299450.0 310140.0 318180.0 299210.0 315330.0 321530.0 344400.0 290660.0 True False 291188.53913912125 295649.7510249262 318753.02613694046 339615.61235300865 343218.9558034441 297342.5194036857 347206.6337242327 320414.68747566594 281865.6416174873 288084.9785300581 1.010773073365015 1.0262588231204106 1.1064548653781423 1.178873032831783 1.1913809513939424 1.0321347573235642 1.2052229709991837 1.1122228208862845 0.9784114501759005 1.0 18.13613491117485 -10.123444661959919 13.502265039065625 1.0000000036927945 1.099345462533674 0.11445516080120888 0.07651837794715659 0.0 0.0 0.07670901914540428 0.018604669904354665 7.525846188075281e-11 10.123444661959919 0.09934545884087953 RRS(ph)PVPR ddPTM_KYSE-520_SHP099_60min_R1 2 RRSPVPR 7 2 A0A0C4DGC9;Q8TDR2 A0A0C4DGC9 STK35 Serine/threonine-protein kinase 35 1 RRS(1)PVPR;RRS(1)PVPR 56.431999999999995 0.049314 85611000.0 37484.0 51563.0 15985.8 128129.0 32590.0 44729.0 35910.0 102215.0 33028.0 39387.0 True False 35404.68779749854 49085.83608235912 17016.27024618435 140306.34163661132 35154.647588265245 44449.829719619884 39540.13324782669 101860.44002216039 27030.94776812533 39038.06182262231 0.9069273971225116 1.2573840449710594 0.4358892181558955 3.5940908714711006 0.9005223606642621 1.1386279862352564 1.012861074596522 2.6092596626590954 0.6924254562366892 1.0 15.252593806725264 RRS(ph)QFFEQGSSDSVVPDLPVPTISAPSR ddPTM_KYSE-520_SHP099_60min_R1 1 RRSQFFEQGSSDSVVPDLPVPTISAPSR 28 2 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 RRS(0.771)QFFEQGS(0.104)S(0.104)DS(0.02)VVPDLPVPTISAPSR 125.05 0.00010946 77158000.0 50118.0 56908.0 58975.0 48525.0 56348.0 56463.0 51197.0 58378.0 73533.0 45300.0 True False 47337.85463224392 54174.054259350516 62776.622863336335 53136.801410426786 60782.26702373646 56110.593473113564 56372.49239456931 58175.50034352764 60181.2608160821 44898.6772428667 1.0543262639160431 1.2065846387035253 1.3981842387864556 1.1834825583613138 1.3537652054859426 1.2497159586595206 1.2555490686204016 1.295706330697533 1.3403793722151007 1.0 15.454385321993223 -4.3481768352180055 3.697099404510604 1.271746019850173 1.0476909567674213 0.24605910255765162 0.10544634518970901 0.27726045355691287 6.266049450405532 0.0241626925034594 0.14102641167239 4.4856270781592467e-05 4.3481768352180055 -0.2240550630827518 RRS(ph)QS(ph)IEQESQEK ddPTM_KYSE-520_SHP099_60min_R1 7 RRSQSIEQESQEK 13 2 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 2 RRS(1)QS(1)IEQESQEK;RRS(0.999)QS(0.997)IEQES(0.005)QEK;RRS(1)QS(1)IEQESQEK;RRS(0.998)QS(0.999)IEQES(0.003)QEK;RRS(0.998)QS(0.999)IEQES(0.003)QEK;RRS(0.998)QS(0.975)IEQES(0.027)QEK;RRS(0.998)QS(0.999)IEQES(0.004)QEK 138.05 0.00026147 7533070000.0 10748850.0 9259447.0 9199415.0 9425480.0 9319452.0 9336160.0 9180603.0 10235280.0 12136540.0 9589399.0 True False 10152589.863198752 8814609.267406702 9792424.010484422 10321274.7853261 10052839.851971574 9277889.5623673 10108667.945290945 10199776.202612316 9932850.273276137 9504444.38529952 1.0681939366073534 0.9274197322928436 1.0302994697544148 1.0859419411501812 1.0576988453444216 0.976163275437475 1.0635727387627176 1.0731585970862496 1.045074269532181 1.0 23.180170861005767 -4.984805728553959 24.982961844578515 1.0458332329335578 0.9930700149977414 0.13578679857254006 0.04440674981044758 373.17292987697033 613576.3159723048 0.01123390805952719 0.023375968024772657 1.0356053168206188e-05 4.984805728553959 -0.0527632179358164 RRS(ph)QSIEQES(ph)QEK ddPTM_KYSE-520_SHP099_60min_R1 3 RRSQSIEQESQEK 13 2 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 2 RRS(1)QS(0.301)IEQES(0.7)QEK;RRS(0.91)QS(0.118)IEQES(0.972)QEK;RRS(1)QS(0.433)IEQES(0.567)QEK 181.94 4.7601000000000004e-07 3683830000.0 6622500.0 5912500.0 5629200.0 5804100.0 5678300.0 5734000.0 5453800.0 6262700.0 7303200.0 5486500.0 True False 6255136.7233735435 5628454.625156574 5992067.239038448 6355719.918933697 6125149.9048925005 5698211.979080692 6005123.327958702 6240976.155425171 5977122.978689984 5437893.878432408 1.1502866483258265 1.0350431161372902 1.101909557816857 1.16878336742494 1.1263827580721766 1.0478711255621866 1.1043105036999747 1.1476825945754332 1.0991613871679713 1.0 22.37461656648435 -8.044690523282704 22.766890505426826 0.9999999995410851 1.1086860425920972 0.3974185830647555 0.040451210725870074 3890.2903683215873 1981844.9600152497 0.040093021596594496 0.010351973713862197 9.022138229818371e-09 8.044690523282704 0.10868604305101215 RRS(ph)QSIEQESQEK ddPTM_KYSE-520_SHP099_60min_R1 1 RRSQSIEQESQEK 13 2 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 RRS(0.974)QS(0.026)IEQESQEK 145.69 6.7049e-06 438570000.0 109550.0 69224.0 74696.0 62489.0 67178.0 54250.0 38967.0 53624.0 89030.0 51783.0 True False 103473.0431174892 65898.37513265763 79511.02367782565 68427.9357719972 72464.52640946566 53911.40562698424 42906.16464127158 53437.99085993571 72864.39626366108 51324.242906564345 2.0160656496358187 1.2839619524953434 1.5491903859658538 1.3332478356586785 1.4118966458285054 1.050408200372869 0.835982417108074 1.0411842013377466 1.4196876980009336 1.0 15.647352820577899 -1.000000000000228 0.3820463655980934 1.0596112355366865 13.208715990355948 0.6276230987607616 0.19653738640893825 47.125613315304285 0.6427262617914523 0.15514379446025167 424.53708663150286 0.09999999999994749 1.000000000000228 12.149104754819263 RRS(ph)QVIEK ddPTM_KYSE-520_SHP099_60min_R1 4 RRSQVIEK 8 2 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 RRS(1)QVIEK;RRS(1)QVIEK;RRS(1)QVIEK;RRS(1)QVIEK 93.839 0.002848 5369100000.0 3045110.0 2997000.0 2689940.0 2267880.0 2141990.0 2474230.0 2425330.0 2200970.0 2945570.0 2592750.0 True False 2876191.6780237104 2853019.6214112886 2863337.8364561754 2483418.6333370176 2310552.4267440424 2458787.4128009793 2670506.0253397813 2193335.348780259 2410728.739777068 2569780.2521289745 1.1192364310687206 1.110219295617849 1.1142345086059395 0.9663933837453964 0.8991245165145266 0.9568084316796965 1.0391962593406028 0.8535108583557509 0.9381069598382439 1.0 21.293213565817904 -5.291374065979907 4.477203306687643 0.9447311829696365 1.1155982662582982 0.7139053817152082 0.04766453914091963 0.10688157840251628 5.283626541299627 0.013725262476649928 0.021831496126034824 5.112413041279847e-06 5.291374065979907 0.17086708328866163 RRS(ph)S(ph)DEDAAGEPK ddPTM_KYSE-520_SHP099_60min_R1 6 RRSSDEDAAGEPK 13 2 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 2 RRS(1)S(1)DEDAAGEPK;RRS(1)S(1)DEDAAGEPK;RRS(1)S(1)DEDAAGEPK;RRS(1)S(1)DEDAAGEPK;RRS(1)S(1)DEDAAGEPK;RRS(1)S(1)DEDAAGEPK 100.02 0.0011087 4224820000.0 3882460.0 3491760.0 3448110.0 3679750.0 3450830.0 3399390.0 3693700.0 3944220.0 4443170.0 3611190.0 True False 3667092.204307873 3324010.608361385 3670380.6877710638 4029472.333642821 3722390.68846313 3378173.146070303 4067095.243038079 3930538.421407866 3636402.3312008446 3579197.666063303 1.024557050614431 0.9287027201315221 1.0254758273264217 1.1258032412819399 1.0400070171473157 0.9438353120591678 1.1363147896526782 1.098161875404606 1.0159825386789716 1.0 21.771204790076133 -4.991183905378633 23.41459840580959 1.0557658600135278 0.9767446500495569 0.19709905696392005 0.05937522391182786 133.82728571563908 355415.7312866743 0.015647106878645737 0.032468561172846536 1.0205072504596883e-05 4.991183905378633 -0.07902120996397088 RRS(ph)S(ph)GWPR ddPTM_KYSE-520_SHP099_60min_R1 1 RRSSGWPR 8 2 A0A087WVE0 A0A087WVE0 2 RRS(1)S(1)GWPR 67.207 0.029344 694490000.0 137020.0 142510.0 134510.0 199780.0 133950.0 130510.0 131050.0 114820.0 153850.0 126310.0 True False 129419.22745740176 135663.6056881289 143180.72982360952 218767.0311339528 144491.10292875502 129695.43867977342 144297.81292474765 114421.71621918956 125914.71824288742 125190.99166769284 1.0337742814669315 1.0836530958092783 1.143698343756783 1.747466237144669 1.1541653357319226 1.035980600138045 1.1526213747692964 0.9139772334650942 1.0057809796500026 1.0 16.93377122884856 -6.1144249144206615 4.8693641835571855 1.0266145394692 1.2553086959035673 0.24036534915615182 0.19129084972729948 0.3685971148845672 13.281805967762887 0.06870444570471193 0.06919079225218042 7.68378289837514e-07 6.1144249144206615 0.2286941564343674 RRS(ph)S(ph)PSARPPDVPGQQPQAAK ddPTM_KYSE-520_SHP099_60min_R1 1 RRSSPSARPPDVPGQQPQAAK 21 3 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 2 RRS(0.892)S(0.63)PS(0.478)ARPPDVPGQQPQAAK 101.45 0.0015687000000000001 766530000.0 221540.0 226630.0 245260.0 240940.0 262800.0 286930.0 316020.0 401670.0 446800.0 345930.0 True False 209250.73457095894 215742.3546214348 261069.85202987504 263838.8651587478 283480.86487254105 285139.1634387205 347966.38565798313 400276.70052048296 365672.3829114208 342865.3293294674 0.6103000702351126 0.6292335099712659 0.7614355541297874 0.7695116495876981 0.8267994475467585 0.8316360362138674 1.0148777257195756 1.1674458345009495 1.0665189846595353 1.0 18.387282500222938 -6.267122918204359 0.7491910808420079 1.1035604755968058 0.6445925979772221 0.8707096992721016 0.06387484662459218 0.2317612830341061 0.28406594544015185 0.04811958195971312 0.04703346422927296 5.406012951090593e-07 6.267122918204359 -0.4589678776195837 RRS(ph)S(ph)S(ph)PFLSK ddPTM_KYSE-520_SHP099_60min_R1 1 RRSSSPFLSK 10 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 3 RRS(0.989)S(0.818)S(0.941)PFLS(0.252)K 52.00899999999999 0.040659 0.0 738110.0 699850.0 645200.0 743950.0 667370.0 721990.0 678250.0 814680.0 912090.0 737170.0 True False 697165.5669141945 666228.1555037329 686790.6243564995 814654.7843232771 719888.2221841232 717483.7926014074 746814.1290821066 811854.065227741 746477.4479178113 730639.2473095808 0.9541857619630402 0.9118428252478529 0.9399859463961945 1.1149890829476587 0.98528545357364 0.9819945961613539 1.0221379864715538 1.111155838147507 1.0216771829142102 1.0 19.47879972660117 -5.119164243256183 8.855767433573142 1.0337735197280482 0.931305172152533 0.5058620701199028 0.044660273629574615 0.25980506630531763 17.834217384321526 0.012429845714765866 0.02159911624878856 7.600387880170155e-06 5.119164243256183 -0.10246834757551526 RRS(ph)S(ph)SPFLSK ddPTM_KYSE-520_SHP099_60min_R1 2 RRSSSPFLSK 10 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 RRS(0.951)S(0.96)S(0.088)PFLSK;RRS(0.999)S(0.548)S(0.453)PFLSK 156.2 8.0622e-05 979690000.0 2292830.0 2239870.0 2157910.0 2055270.0 2164860.0 2141970.0 2094230.0 2060980.0 2522970.0 1988280.0 True False 2165642.1492567123 2132263.2830865853 2297012.3313780758 2250602.2428605445 2335222.1656315424 2128601.17070657 2305935.2061151788 2053830.9414163502 2064862.2468980036 1970665.3860584307 1.0989395584748454 1.0820016925102491 1.1656024141025678 1.1420519479271016 1.184991720132797 1.0801433798784228 1.170130262818148 1.0422017639048609 1.0477995206623982 1.0 20.910251400573 -7.349391605558713 6.113238948134154 1.0315076255446496 1.1316616434474431 0.6256036834667407 0.036188691516719634 0.16551307868937976 9.332461267441245 0.020367846316080265 0.009601566526292068 4.473097807537864e-08 7.349391605558713 0.10015401790279355 RRS(ph)SDEDAAGEPK ddPTM_KYSE-520_SHP099_60min_R1 6 RRSSDEDAAGEPK 13 2 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 RRS(0.91)S(0.09)DEDAAGEPK;RRS(0.908)S(0.092)DEDAAGEPK;RRS(0.5)S(0.5)DEDAAGEPK;RRS(0.5)S(0.5)DEDAAGEPK;RRS(0.5)S(0.5)DEDAAGEPK;RRS(0.5)S(0.5)DEDAAGEPK 127.22 4.3733e-05 5053240000.0 4679000.0 4631580.0 4215180.0 4092180.0 4423030.0 4164510.0 4061800.0 4272540.0 5372560.0 4059570.0 True False 4419446.54264475 4409071.944656686 4486897.247326459 4481099.556841222 4771097.297401807 4138517.748343456 4472406.383347886 4257719.555958329 4397038.535216165 4023605.3680976685 1.0983797212533875 1.0958012879730457 1.1151434688158375 1.1137025495519342 1.185776650769692 1.0285595553572187 1.1115420062833863 1.0581851763388386 1.0928105847753784 1.0 21.940057383064175 -8.483807891802766 0.4478672714853967 0.9929570096320527 1.1146049605188422 0.430644677778235 0.03683449772939195 1.9764048577324136 0.7565970557784433 0.06979886690154727 0.022833882669421685 3.2824045668400477e-09 8.483807891802766 0.12164795088678948 RRS(ph)SPS(ph)ARPPDVPGQQPQAAK ddPTM_KYSE-520_SHP099_60min_R1 2 RRSSPSARPPDVPGQQPQAAK 21 3 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 2 RRS(0.957)S(0.08)PS(0.963)ARPPDVPGQQPQAAK;RRS(0.998)S(0.051)PS(0.951)ARPPDVPGQQPQAAK 129.27 5.0594e-05 2134600000.0 412100.0 394130.0 395330.0 485940.0 487580.0 578650.0 707520.0 876030.0 859050.0 710170.0 True False 389239.9914990172 375195.403198809 420813.60435036407 532123.5914968116 525949.7720492898 575038.4307106808 779043.0263297792 872991.2563969387 703068.1748882185 703878.4463038997 0.5529931958322286 0.5330400514023103 0.5978498227358388 0.7559879042908881 0.7472167599549011 0.8169570097368882 1.106786307238945 1.2402585431917381 0.9988488475248305 1.0 19.424966783902093 -6.240090720771175 0.9693723307702957 1.1177500971075083 0.5649460761422296 0.8528463959817197 0.08859522276895421 0.19451797085632933 0.389090112854068 0.053551187524184134 0.04995793907024768 5.753197449218928e-07 6.240090720771175 -0.5528040209652787 RRS(ph)SPSARPPDVPGQQPQAAK ddPTM_KYSE-520_SHP099_60min_R1 1 RRSSPSARPPDVPGQQPQAAK 21 3 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RRS(0.333)S(0.333)PS(0.333)ARPPDVPGQQPQAAK 131.43 2.459e-05 2796400000.0 888780.0 851340.0 843780.0 660510.0 600740.0 587230.0 532840.0 637520.0 927550.0 440090.0 True False 839477.601660995 810440.3485126087 898171.4088957341 723284.6718104269 648014.8202569645 583564.8797480919 586704.6672172649 635308.5919182865 759130.3016326957 436191.1449848395 1.9245636031657003 1.857993583388257 2.0591234352704513 1.6581828405424548 1.485621218375461 1.3378650310940507 1.3450632227705053 1.4564912635729175 1.7403615602033382 1.0 18.73460095689569 -5.571543450475369 2.5229147425287777 1.4069148827646785 1.937851849376233 0.6584234975006125 0.1783614761764838 0.17735011279628904 2.2832369005953685 0.054673715223751126 0.07844550343739176 2.6819862657051794e-06 5.571543450475369 0.5309369666115544 RRS(ph)SS(ph)PFLSK ddPTM_KYSE-520_SHP099_60min_R1 5 RRSSSPFLSK 10 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 RRS(0.995)S(0.005)S(0.999)PFLS(0.001)K;RRS(0.992)S(0.478)S(0.53)PFLSK;RRS(0.998)S(0.125)S(0.877)PFLSK;RRS(0.95)S(0.191)S(0.858)PFLS(0.001)K;RRS(0.994)S(0.431)S(0.574)PFLSK 161.45 5.7098999999999997e-05 10598630000.0 8029470.0 7885650.0 7541160.0 7014650.0 7018260.0 6847110.0 6625310.0 7281420.0 8912100.0 6961460.0 True False 7584059.29274839 7506811.53739804 8027275.239882607 7681320.226968573 7570557.133563013 6804374.646683499 7295060.991594506 7256162.453516204 7293887.295758436 6899786.880333933 1.0991729779893347 1.0879773053272521 1.1634091572831458 1.1132692009462206 1.0972160828823478 0.9861717129376297 1.057287872526498 1.0516502291104133 1.0571177664266391 1.0 22.71812037013762 -6.078584448335258 6.352885450155989 1.0354712195872817 1.11600108047004 0.6719079199563168 0.02868904280521697 0.15390950842913953 10.147764160301968 0.009656143164335135 0.009717560740865527 8.344792684421594e-07 6.078584448335258 0.08052986088275826 RRSPS(ph)PY(ph)YSR ddPTM_KYSE-520_SHP099_60min_R1 2 RRSPSPYYSR 10 2 P62995;P62995-3;H7BXF3;Q13595;Q13595-3 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RRS(0.337)PS(0.917)PY(0.725)Y(0.008)S(0.014)R;RRS(0.011)PS(0.993)PY(0.848)Y(0.127)S(0.02)R 128.46 0.00079274 29445400000.0 3336900.0 3150800.0 2864700.0 2953900.0 2836780.0 2913600.0 2943700.0 2982050.0 3345700.0 2562530.0 True False 3151795.5050547644 2999430.8385527814 3049363.145682063 3234637.767877578 3060018.4469297053 2895415.1416549594 3241277.923743456 2971705.9645657 2738205.21823353 2539827.977818173 1.2409484156333688 1.1809582636102103 1.2006179837036064 1.273565688750416 1.2048132683215813 1.1400044282299198 1.2761801004050126 1.170042219598876 1.0781065655421955 1.0 21.276299356103937 -7.848390708677734 2.269994092766723 1.002967023432896 1.2141652762876745 0.7694280131491202 0.039340065933675054 0.12762314717309148 1.3256607613701015 0.03695658161544289 0.010375279767886164 1.4177814548992576e-08 7.848390708677734 0.21119825285477845 RRSQFFEQGS(ph)SDSVVPDLPVPTISAPSR ddPTM_KYSE-520_SHP099_60min_R1 1 RRSQFFEQGSSDSVVPDLPVPTISAPSR 28 2 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 RRS(0.124)QFFEQGS(0.436)S(0.436)DS(0.004)VVPDLPVPTISAPSR 70.578 0.01842 244540000.0 95963.0 137520.0 114160.0 89652.0 110270.0 95854.0 87121.0 94042.0 142170.0 71417.0 True False 90639.74109250218 130913.33277827168 121518.93626245813 98172.49912514338 118947.62164952458 95255.7396307641 95928.0408990228 93715.79025156784 116355.51181404814 70784.30094158524 1.2805062688590036 1.849468470223474 1.716749825116471 1.3869247533596505 1.680423767237401 1.3457184483516185 1.3552163350202107 1.32396292687706 1.6438039263829214 1.0 16.11114180390912 -6.273617745092185 23.715934304502664 1.35533022663476 1.5941867921858417 0.25710721450470875 0.2096504811929787 568.4617760080812 1107008.0163431405 0.07100936814375991 0.06315212358171997 5.325768135370428e-07 6.273617745092185 0.2388565655510817 RRSQS(ph)IEQES(ph)QEK ddPTM_KYSE-520_SHP099_60min_R1 1 RRSQSIEQESQEK 13 2 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 2 RRS(0.481)QS(0.53)IEQES(0.989)QEK 154.99 1.7249e-05 2026300000.0 5308800.0 4659600.0 4806900.0 4626200.0 4773200.0 4987900.0 4687500.0 5204500.0 6115300.0 5001700.0 True False 5014310.28116957 4435745.821797809 5116760.465311935 5065872.657082255 5148823.684207046 4956768.665932445 5161358.245591413 5186446.804239426 5004915.67416788 4957388.829263713 1.0114821438999997 0.8947746433794703 1.0321483025715965 1.0218832598278667 1.0386160661462107 0.9998749012125885 1.0411445265547175 1.0462053679597558 1.0095870722553804 1.0 22.241148989328824 -4.792599334865405 24.998155540196166 1.0255751205366517 0.953128331100341 0.4610862388181033 0.030455623747572772 130.66261211699054 104824.11552017907 0.007299601394790052 0.015197663885188284 1.6121322470236464e-05 4.792599334865405 -0.07244678943631067 RRSQS(ph)IEQESQEK ddPTM_KYSE-520_SHP099_60min_R1 2 RRSQSIEQESQEK 13 2 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 RRS(0.096)QS(0.901)IEQES(0.004)QEK;RRS(0.216)QS(0.782)IEQES(0.002)QEK 175.39 3.0559e-07 517600000.0 233764.0 247246.0 242449.0 167053.0 232384.0 186582.0 179579.0 194967.0 275682.0 215127.0 True False 220796.6449230191 235367.93103618815 258077.65047211578 182929.6668936842 250671.2987159074 185417.47252892135 197732.59784214597 194290.70498263976 225625.0981776777 213221.1421462732 1.035528853754798 1.1038676965472864 1.210375518460877 0.8579339977842884 1.1756399773149269 0.8696017227115401 0.9273592470792515 0.9112168850936608 1.0581741374544142 1.0 17.701990971433155 -5.257309944104298 24.978299894867202 0.9701498230583233 1.1153183843753574 0.3190954538843017 0.09716239862559448 419.3514807342569 2536578.746085835 0.026069795617316635 0.043160464248348816 5.529553392485385e-06 5.257309944104298 0.14516856131703404 RRSS(ph)DEDAAGEPK ddPTM_KYSE-520_SHP099_60min_R1 2 RRSSDEDAAGEPK 13 2 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 RRS(0.355)S(0.645)DEDAAGEPK;RRS(0.382)S(0.618)DEDAAGEPK 145.48 6.7984e-06 742900000.0 684880.0 682350.0 673540.0 689380.0 677770.0 634820.0 649780.0 680670.0 837300.0 647230.0 True False 646888.3411255688 649568.8817717687 716957.4661021027 754898.4679303445 731106.6430162176 630857.8529054779 715466.1036416822 678308.9146395718 685267.4266153363 641496.0457373201 1.0084058123570363 1.012584389394279 1.1176334926243372 1.176778053343544 1.1396900228370095 0.9834165886094981 1.11530867321145 1.0573859638681637 1.0682332824479166 1.0 19.29108084682466 -9.323309679653697 13.456485989316139 1.0000019059645275 1.0776795888225879 0.1265636972195 0.05924599585047317 0.0 0.0 0.06121024596798107 0.014845665264471971 4.749964024378248e-10 9.323309679653697 0.07767768285806032 RRSS(ph)PSARPPDVPGQQPQAAK ddPTM_KYSE-520_SHP099_60min_R1 1 RRSSPSARPPDVPGQQPQAAK 21 3 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RRS(0.149)S(0.702)PS(0.149)ARPPDVPGQQPQAAK 111.57 0.00018737 2706100000.0 688460.0 795300.0 768310.0 597520.0 528010.0 528330.0 461830.0 436950.0 734470.0 451970.0 True False 650269.7513890149 757092.594230363 817836.4919394655 654308.1211490609 569561.3830340576 525032.4964959373 508516.2834264499 435434.32243489655 601108.7624819853 447965.8974273393 1.4516054796213356 1.6900674774091806 1.8256668568663081 1.4606203840666032 1.2714391570988754 1.1720367543850776 1.1351674007928962 0.9720256049301713 1.3418627755687274 1.0 18.773029381976084 -5.75288842793983 2.0160401927781955 1.1255292884118702 1.6592716459588097 0.7626385945648478 0.12987900481993656 0.1495604230921052 1.251244353758666 0.04396476365708896 0.057438525219102664 1.7664915814375234e-06 5.75288842793983 0.5337423575469395 RRT(ph)AS(ph)PPPPPK ddPTM_KYSE-520_SHP099_60min_R1 2 RRTASPPPPPK 11 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRT(1)AS(1)PPPPPK;RRT(1)AS(1)PPPPPK 100.56 0.0019629 6986500000.0 5293900.0 4764700.0 4686500.0 4726400.0 4694200.0 4938400.0 4560500.0 4722700.0 6008500.0 5212200.0 True False 5000236.813871988 4535796.660039489 4988599.288665124 5175595.634956026 5063606.833655566 4907577.613793536 5021519.846190853 4706318.05598647 4917507.861958983 5166023.96303024 0.9679081726401816 0.8780053465681028 0.9656554681831087 1.0018528121422365 0.9801748636654409 0.949971902746439 0.9720279816985935 0.911013593755357 0.9518941253757786 1.0 22.300622904856105 -4.879785908712921 19.719772641051172 0.9647554451137875 0.9226288523680828 0.22784983246569424 0.0319747289250127 2.7935082666044218 461.0609575377143 0.008431514513483224 0.017551800557427413 1.3189067510914833e-05 4.879785908712921 -0.04212659274570474 RRT(ph)AS(ph)PPPPPKR ddPTM_KYSE-520_SHP099_60min_R1 1 RRTASPPPPPKR 12 3 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRT(1)AS(1)PPPPPKR 73.252 0.055861 820390000.0 593600.0 488340.0 125080.0 833210.0 242180.0 428460.0 362030.0 798110.0 157210.0 151130.0 True False 560671.8246877376 464879.4133867164 133142.85693507583 912398.02788628 261238.1881842921 425785.82221083273 398627.5254723114 795341.5426902747 128664.62694159469 149791.10577736062 3.743024806299797 3.1035181359678443 0.8888568933656874 6.091136206994872 1.7440166879639631 2.8425307363956045 2.6612229304509203 5.309671349061383 0.8589603920331098 1.0 17.192592437139734 -7.81004729177276 24.96398793822069 0.9294608634489718 3.216108423639222 0.298381336096489 1.4484361382058772 160.88113275334334 82620.96523142535 1.329246844170153 0.3432126869252035 1.548647972294187e-08 7.81004729177276 2.28664756019025 RRT(ph)DEDAVLMDGMTESDTASVNENGLGK ddPTM_KYSE-520_SHP099_60min_R1 2 RRTDEDAVLMDGMTESDTASVNENGLGK 28 2 E7EU85;E9PFF5;P51114-2 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RRT(1)DEDAVLMDGMTESDTASVNENGLGK;RRT(1)DEDAVLMDGMTESDTASVNENGLGK 205.07 2.9448e-16 1260360000.0 250478.0 240528.0 226607.0 272039.0 259589.0 222675.0 250660.0 282225.0 330536.0 231944.0 True False 236583.48602448593 228972.6738401116 241214.4498040196 297893.50476849213 280017.1774406319 221285.20272790288 275999.1590058545 281246.0273468104 270518.99453448824 229889.15660970166 1.0291198137115691 0.9960133710388697 1.0492641469538542 1.295813639763123 1.2180530024564662 0.9625734679761069 1.2005749339210328 1.2233984042331354 1.1767366435371573 1.0 17.81057889319258 -5.021756452695679 23.61087956497923 1.1608126300509818 1.015084578670075 0.27653406797341273 0.09642276346823342 441.0023354294561 478593.5482196898 0.026414221747215232 0.04637807222908934 9.511380312930576e-06 5.021756452695679 -0.14572805138090672 RRT(ph)EEGPTLSYGR ddPTM_KYSE-520_SHP099_60min_R1 2 RRTEEGPTLSYGR 13 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 RRT(0.998)EEGPT(0.002)LSYGR;RRT(0.999)EEGPTLSYGR 107.69 0.00093895 3265600000.0 265610.0 246650.0 272620.0 200677.0 264680.0 240270.0 251010.0 326530.0 346560.0 225368.0 True False 250876.08381959208 234800.56377080237 290193.52140742284 219749.28174426008 285508.8101768045 238770.3858063689 276384.5404215252 325397.34364267485 283633.4400666563 223371.41485365067 1.1231342380311375 1.051166569028718 1.2991524524190032 0.9837842585553583 1.2781797096278646 1.0689388611466126 1.237331735587599 1.456754633782796 1.2697839616250284 1.0 17.769085048407028 -6.962182853015853 8.470849841744764 1.28722349255253 1.1385218756183821 0.0988794504239967 0.13910788460315324 0.3989161978751155 80.64937020721275 0.05491971820063262 0.036812683613700284 1.090980898998482e-07 6.962182853015853 -0.14870161693414796 RRT(ph)FSLTEVR ddPTM_KYSE-520_SHP099_60min_R1 1 RRTFSLTEVR 10 2 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 RRT(0.997)FS(0.003)LTEVR 84.58 0.011366 539930000.0 496880.0 444410.0 421230.0 365330.0 468310.0 459350.0 379430.0 403380.0 471350.0 451610.0 True False 469317.07589427644 423059.87652699027 448383.15979182936 400050.8533595302 505163.33268059185 456483.0262627689 417786.48727994657 401980.7689295996 385764.7217665581 447609.08674726344 1.048497650717422 0.945154799249787 1.0017293506040974 0.8937505184862649 1.1285814958574012 1.0198251996624814 0.9333735611043218 0.8980621279401612 0.8618339823480283 1.0 18.771879798669236 -6.8747338844469095 4.725822716892696 0.9111803472581552 1.003503702281601 0.27026335089029196 0.06630847605041142 0.2811830604147671 10.374823141302237 0.02874019268261508 0.019111578471267977 1.3343388027601822e-07 6.8747338844469095 0.09232335502344569 RRT(ph)IHTFPCLK ddPTM_KYSE-520_SHP099_60min_R1 1 RRTIHTFPCLK 11 2 Q86X02 Q86X02 CDR2L Cerebellar degeneration-related protein 2-like 1 RRT(0.835)IHT(0.165)FPCLK 96.59100000000001 0.0016457000000000002 1157200000.0 562260.0 485810.0 356380.0 797970.0 312710.0 441930.0 446750.0 654630.0 508850.0 226430.0 True False 531070.3169624784 462470.95838432293 379352.82502816065 873808.8288815703 337318.49792348634 439171.7509443905 491911.8498598322 652359.2413217905 416455.66706462903 224424.00635987442 2.366370361069494 2.060701820119587 1.6903397777323812 3.893562204216143 1.5030410667501422 1.9568840164102497 2.1918860546096326 2.9068157720867966 1.8556645245732886 1.0 17.775867481951718 RRT(ph)PS(ph)PPPR ddPTM_KYSE-520_SHP099_60min_R1 1 RRTPSPPPR 9 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRT(1)PS(1)PPPR 70.622 0.0622 16665000000.0 928950.0 891890.0 858260.0 886180.0 868670.0 820300.0 884940.0 782010.0 1176300.0 890200.0 True False 877419.2916840867 849042.2656458161 913584.8128645542 970402.2807602683 937029.3869437983 815180.2034251647 974398.371382115 779297.3898325065 962713.5721099032 882313.5205651191 0.994452959444736 0.9622908930399334 1.0354423813877476 1.099838388670196 1.0620140858134348 0.9239121745556436 1.1043674937203907 0.883243168860621 1.09112412954217 1.0 19.750931867399256 -9.18281365579258 14.325213138504758 1.0000137310791208 1.015916635622135 0.004796880532986547 0.07241014516370597 0.0 0.0 0.06701743278173707 0.01625411494804903 6.564268611875026e-10 9.18281365579258 0.01590290454301413 RRT(ph)PS(ph)PPPRR ddPTM_KYSE-520_SHP099_60min_R1 2 RRTPSPPPRR 10 3 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRT(1)PS(1)PPPRR;RRT(1)PS(1)PPPRR 79.875 0.031529 942710000.0 390070.0 355350.0 90412.0 563930.0 179944.0 306620.0 255100.0 542080.0 118289.0 109189.0 True False 368432.039514733 338278.4526087761 96240.1021843147 617525.7376482624 194104.5690586929 304706.27084508614 280887.9975360786 540199.6510024228 96810.6994230283 108221.67040775662 3.4044201879952336 3.1257921942455114 0.8892867927625042 5.706119073209225 1.7935831920478353 2.815575380577814 2.595487544017306 4.991603335700359 0.8945592787310142 1.0 16.723629889123263 -8.789077030207586 16.745027715461255 0.9999862557718183 2.9578449556453097 0.12978866749240903 1.4818889676599118 0.0 7.180548700416542e-17 1.3333429440520617 0.3233831645151164 1.6252604599989937e-09 8.789077030207586 1.9578586998734915 RRT(ph)PT(ph)PPPR ddPTM_KYSE-520_SHP099_60min_R1 5 RRTPTPPPR 9 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRT(1)PT(1)PPPR;RRT(1)PT(1)PPPR;RRT(1)PT(1)PPPR;RRT(1)PT(1)PPPR;RRT(1)PT(1)PPPR 63.534 0.034657 24663900000.0 11738980.0 10479550.0 10692070.0 10286440.0 10278020.0 10504180.0 9867430.0 9624420.0 12458540.0 9548298.0 True False 11087795.378323527 9976096.687874751 11381297.940116877 11264060.164869048 11086841.700065713 10438619.51629228 10864926.121236488 9591035.133376526 10196383.190235555 9463707.508183438 1.1716122216093123 1.0541425418366153 1.2026257077657212 1.1902375633575755 1.1715114494481915 1.1030158642652277 1.148062333059363 1.0134543068964235 1.0774195188744538 1.0 23.173974054771303 -7.254988372997759 24.46056108076444 1.0340776817574782 1.1478906273180043 0.5931515553052745 0.0449193219420937 271.8450104834441 1030771.6803813243 0.022085468912026226 0.01235851723728348 5.5591914022847964e-08 7.254988372997759 0.11381294556052612 RRT(ph)SADVEIR ddPTM_KYSE-520_SHP099_60min_R1 2 RRTSADVEIR 10 2 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 RRT(0.923)S(0.077)ADVEIR;RRT(0.889)S(0.111)ADVEIR 105.99 0.0028333000000000004 516050000.0 249021.0 271010.0 332400.0 381690.0 359210.0 501020.0 578960.0 724900.0 959370.0 608100.0 True False 235207.3087189434 257990.2728056964 353827.03585880465 417965.70284071675 387477.78337467846 497892.94833606685 637486.9269050895 722385.4910929324 785172.5917496185 602712.7070946409 0.39024780123311714 0.42804850431863467 0.5870575345331901 0.6934741841689521 0.6428896866012729 0.8260866951621865 1.0576961782970806 1.198556928681943 1.3027311063915015 1.0 19.201110956135043 -6.375893720215817 0.8507700766568986 1.2125493429047463 0.4639523931011772 0.8904786173393514 0.09954023761140454 0.18639365976178793 0.28685366267432894 0.070092905696875 0.05858831918933699 4.208296004663614e-07 6.375893720215817 -0.7485969498035691 down RRT(ph)TDFSDFLSIVGCTK ddPTM_KYSE-520_SHP099_60min_R1 1 RRTTDFSDFLSIVGCTK 17 2 Q9UHD1;E9PPQ5;E9PIZ4;E9PSD5 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 RRT(0.611)T(0.142)DFS(0.247)DFLSIVGCTK 159.98 1.1227e-07 1087400000.0 1893200.0 1645700.0 1610600.0 2081400.0 1807200.0 1544100.0 1515900.0 1744100.0 1930400.0 1220100.0 True False 1788180.4219993665 1566638.10175394 1714421.8530511127 2279215.630204271 1949416.3584385694 1534462.6991451867 1669141.9657582976 1738050.1241759998 1579888.021423918 1209290.8632234351 1.478701672509844 1.2955014789229244 1.41770843160199 1.8847538665171828 1.6120326529568632 1.2688946438038795 1.3802650929728375 1.4372473794626432 1.3064582471190054 1.0 20.205729858130276 -6.266502055635002 24.433536416500697 1.3122567766156705 1.5368921176507024 0.33491813858142394 0.17949379117440767 467.9876172765559 2258597.809600753 0.06654918267181154 0.06054408098039093 5.413746854016218e-07 6.266502055635002 0.2246353410350319 RRT(ph)WDDDYVLK ddPTM_KYSE-520_SHP099_60min_R1 3 RRTWDDDYVLK 11 2 A0A087X2H1;Q9ULT8;H0YJP0;H0YJD4 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 RRT(1)WDDDYVLK;RRT(1)WDDDYVLK;RRT(1)WDDDYVLK 136.6 0.00025285 1848790000.0 1754280.0 1586300.0 1519290.0 1475480.0 1593560.0 1574820.0 1535390.0 1659670.0 1891460.0 1485480.0 True False 1656966.5913295222 1510091.766915157 1617225.8643499492 1615709.175580761 1718964.1058838884 1564990.964230181 1690602.2051623666 1653912.9921398906 1548018.5438264015 1472319.8028859508 1.1254121476065446 1.0256547279708987 1.0984202353184156 1.097390099904754 1.1675208759092153 1.0629422773249275 1.1482574654287419 1.1233381422283337 1.0514146048922732 1.0 20.48965964284273 -7.99050347474707 4.085201082345447 1.000284342204204 1.1046314046397796 0.4400450115604466 0.038416105446098234 0.16742103358146207 7.436412217288879 0.037195449510050355 0.009771943471594168 1.0221073827875763e-08 7.99050347474707 0.10434706243557557 RRT(ph)WDDDYVLKR ddPTM_KYSE-520_SHP099_60min_R1 1 RRTWDDDYVLKR 12 3 A0A087X2H1;Q9ULT8;H0YJP0;H0YJD4 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 RRT(1)WDDDYVLKR 54.501000000000005 0.041372000000000006 480850000.0 306330.0 293280.0 324700.0 394950.0 276620.0 203970.0 244970.0 241630.0 402540.0 143300.0 True False 289337.2642462846 279190.3885777455 345630.6815383687 432485.9292539526 298388.42024749715 202696.94757116996 269733.95827680634 240791.84192686618 329448.88320761704 142030.47348571313 2.037149191616186 1.9657076522090828 2.433496650795407 3.045022090259077 2.1008760509237625 1.4271370262773875 1.899127360889485 1.6953533704236188 2.3195647745323917 1.0 17.115840976209135 -6.00528315431135 24.97675870339589 1.7303355866008536 2.3743268157789124 0.3855003181412274 0.41667931099632766 272.1642152891983 1286698.21193681 0.13294466776827352 0.14651526352064598 9.879087810577309e-07 6.00528315431135 0.6439912291780587 RRTDEDAVLMDGMT(ph)ESDTASVNENGLGK ddPTM_KYSE-520_SHP099_60min_R1 1 RRTDEDAVLMDGMTESDTASVNENGLGK 28 2 E7EU85;E9PFF5;P51114-2 E7EU85 FXR1 Fragile X mental retardation syndrome-related protein 1 1 RRT(0.079)DEDAVLMDGMT(0.536)ES(0.385)DTASVNENGLGK 124.25 0.00044023 347350000.0 103800.0 109920.0 77791.0 93027.0 83630.0 85737.0 87379.0 96370.0 112260.0 110140.0 True False 98042.00707983012 104639.2782067162 82805.5323300007 101868.25811041247 90211.20521039031 85201.88358047468 96212.1220568602 96035.71496292713 91876.41384430633 109164.24528762323 0.8981146420378896 0.9585490004626995 0.7585407851428528 0.9331650472369641 0.8263805147253488 0.7804925812108798 0.8813519646782049 0.8797359859896858 0.8416346726186092 1.0 16.736140880210503 -10.667078770093447 6.090447298785734 1.0012992958452236 0.8615326900516482 0.3261343032131636 0.059508150843522956 0.001043960657156329 5.706584718120554e-05 0.057294209663378864 0.013771257609601802 2.1523913096830542e-11 10.667078770093447 -0.13976660579357536 RRTS(ph)ADVEIR ddPTM_KYSE-520_SHP099_60min_R1 1 RRTSADVEIR 10 2 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 RRT(0.283)S(0.717)ADVEIR 64.22399999999999 0.023736 80088000.0 11206.0 15439.0 15325.0 17200.0 17445.0 19712.0 25971.0 28327.0 36935.0 29101.0 True False 10584.380841392822 14697.28726558855 16312.874020866968 18834.68282863144 18817.822251527698 19588.97009620487 28596.402132534295 28228.740248571485 30228.53505558042 28843.187780235403 0.36696293495844784 0.5095583531741164 0.5655711201258155 0.6530028155049414 0.6524182553920923 0.67915412975358 0.9914438844422663 0.978696961780176 1.0480303108623215 1.0 14.815943001152622 -6.304419520335004 0.6151995303173687 1.0668718027140978 0.43710598633126474 0.9137831286756848 0.06722128026115051 0.22899469312302623 0.1882380679543073 0.05755874533111437 0.06107491128632418 4.961128541846764e-07 6.304419520335004 -0.629765816382833 down RRTT(ph)DFSDFLSIVGCTK ddPTM_KYSE-520_SHP099_60min_R1 1 RRTTDFSDFLSIVGCTK 17 2 Q9UHD1;E9PPQ5;E9PIZ4;E9PSD5 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 RRT(0.385)T(0.607)DFS(0.008)DFLSIVGCTK 146.89 1.7484e-05 938870000.0 399890.0 425240.0 472300.0 511160.0 487100.0 367380.0 358070.0 383740.0 557280.0 370780.0 True False 377707.30453904835 404810.8321017466 502745.21370671864 559740.492714142 525431.9987801171 365087.0451473081 394267.2100264355 382408.89550558885 456091.9998855789 367495.177662475 1.0277884649848459 1.1015405281686284 1.3680321382841756 1.5231233679703797 1.4297656968513988 0.9934471724758831 1.0728500235955456 1.0405820776696322 1.241082951854338 1.0 18.487365793207367 -6.269988754827779 24.93279833788153 1.0723324217374026 1.2968581472981884 0.34973379230249557 0.15013778810256947 806.034243052682 2350655.534972767 0.05878882428627358 0.05265499029321066 5.370457018962838e-07 6.269988754827779 0.22452572556078576 RRTTDFS(ph)DFLSIVGCTK ddPTM_KYSE-520_SHP099_60min_R1 1 RRTTDFSDFLSIVGCTK 17 2 Q9UHD1;E9PPQ5;E9PIZ4;E9PSD5 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 RRT(0.273)T(0.273)DFS(0.453)DFLSIVGCTK 150.94 1.8352e-05 0.0 116710.0 117770.0 123100.0 130600.0 149690.0 104650.0 99717.0 119100.0 148780.0 102410.0 True False 110235.86364438302 112112.15242362618 131035.22296696405 143012.18473367835 161469.7513804058 103996.84053205364 109797.3675041362 118686.86989814896 121765.302438588 101502.72707377444 1.086038442733279 1.104523549816948 1.2909527334346862 1.4089491864561818 1.5907922480057701 1.024571886196382 1.0817183997857813 1.1692973511133815 1.19962592088867 1.0 16.631158963255718 RRVEEEKR ddPTM_KYSE-520_SHP099_60min_R1 3 RRVEEEKR 8 3 B4DKY1;P49589-2;P49589;P49589-3 B4DKY1 CARS Cysteine--tRNA ligase, cytoplasmic 0 ;; 99.65299999999999 0.0060793999999999996 331297000.0 258615.0 297131.0 124692.0 122562.0 314742.0 308809.0 162685.0 197178.0 203310.0 169312.0 False True 244269.11041377898 282856.38075727655 132729.84583425414 134210.25563039118 339510.4047629877 306881.6084841174 179130.78745259484 196494.03553969128 166394.0290280237 167812.02740274285 1.4556114611948634 1.68555487431441 0.790943580674985 0.7997654143602674 2.0231589476490552 1.8287223701052875 1.0674490394105505 1.1709174758261673 0.9915500789981162 1.0 17.356486594579604 -6.897612601325347 23.675320733870638 1.0715146947767558 1.414466371842417 0.19100491849600854 0.3748803504065055 15.986577320087745 3658.0163277664383 0.17358423508611565 0.11703050814235334 1.2658650189040766e-07 6.897612601325347 0.3429516770656613 RRVEHHDHAVVSGR ddPTM_KYSE-520_SHP099_60min_R1 4 RRVEHHDHAVVSGR 14 2 O95831-3;O95831;E9PMA0;O95831-5;O95831-2 O95831-3 AIFM1 Apoptosis-inducing factor 1, mitochondrial 0 ;;; 144.29 6.5551999999999995e-06 1214630000.0 147718.0 309360.0 277168.0 479780.0 174219.0 119150.0 225328.0 116305.0 362907.0 34503.7 False True 139523.7880714675 294497.8812411731 295034.69276447984 525378.1469488833 187929.04412948713 118406.34065355148 248106.35322935946 115901.56510079117 297012.2369409911 34198.02406147241 4.079878645054683 8.611546699651434 8.627243849941223 15.362821723398218 5.495318787766119 3.4623737453576564 7.254990896063986 3.389130462404879 8.685070120048424 1.0 15.061625349132308 -5.964821257286593 24.999958085626524 4.998686853444787 9.258839548869675 0.2976127671531714 3.232938159228219 232.27676504241805 165067.7524721644 0.9914455564139765 1.12418975205158 1.0843731179702268e-06 5.964821257286593 4.260152695424888 RRVS(ph)EVEEEKEPVPQPLPSDDTR ddPTM_KYSE-520_SHP099_60min_R1 13 RRVSEVEEEKEPVPQPLPSDDTR 23 3 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR;RRVS(1)EVEEEKEPVPQPLPSDDTR 224.84 4.0963e-21 68267100000.0 21178100.0 21710650.0 21361620.0 20931450.0 22065380.0 22285920.0 23588270.0 27110040.0 35425500.0 24586300.0 True False 20003308.575504296 20667637.78564995 22738624.20500046 22920768.714730076 23801799.871161614 22146825.30673774 25972802.530930486 27016001.598770905 28993122.204182018 24368484.509851962 0.8208679767269539 0.8481297955682968 0.933116057989057 0.9405906512349347 0.9767451833756324 0.9088306372841518 1.0658357732681287 1.1086451267762907 1.189779454379297 1.0 24.538513196023462 -6.357208877393892 0.7126409413643374 1.1163807954659168 0.8596962395136793 0.6823265522966409 0.061705726783203886 0.41297842468109264 0.45226616729907815 0.04817418298988695 0.04408556918348205 4.3933026522258137e-07 6.357208877393892 -0.2566845559522375 RRVS(ph)HS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 5 RRVSHSPPPK 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RRVS(1)HS(1)PPPK;RRVS(1)HS(1)PPPK;RRVS(1)HS(1)PPPK;RRVS(1)HS(1)PPPK;RRVS(1)HS(1)PPPK 93.494 0.001825 17597540000.0 2923980.0 2670900.0 2191030.0 2561570.0 2599150.0 2760260.0 2249850.0 2587550.0 3043530.0 2167330.0 True False 2761781.000590381 2542585.954897367 2332267.299571952 2805020.8426358975 2803688.3178594536 2743032.1934735393 2477286.794420019 2578574.392988708 2490901.6731477096 2148129.142357225 1.2856680476667117 1.1836280718706182 1.085720245391143 1.3057971177458352 1.3051767989995509 1.2769400774776065 1.1532299178724406 1.200381458518429 1.1595679347352212 1.0 21.034649297953735 -8.324613816192084 0.8849977072961571 0.9998366477950079 1.2307272217175762 0.518248134499169 0.06674455612088186 0.9968809929971918 1.4545487648211683 0.07052980959369685 0.02382003232327305 4.735721821537808e-09 8.324613816192084 0.2308905739225683 RRWDNDDMTDDIPESSLFS(ph)PMPSEEK ddPTM_KYSE-520_SHP099_60min_R1 2 RRWDNDDMTDDIPESSLFSPMPSEEK 26 2 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 RRWDNDDMTDDIPESSLFS(1)PMPSEEK;RRWDNDDMTDDIPES(0.015)S(0.013)LFS(0.972)PMPSEEK 128.52 6.759600000000001e-05 725330000.0 229479.0 248239.0 172469.0 193337.0 197157.0 189120.0 181023.0 189074.0 263643.0 173829.0 True False 216749.3424149549 236313.22582566438 183586.62770015697 211711.69035111147 212672.1342301202 187939.6319294978 199322.5714542279 188418.14642420335 215772.07709918488 172289.0102969157 1.2580566923068288 1.3716093987562645 1.0655736392226727 1.2288171485009773 1.2343917575683436 1.0908393495650737 1.1569082155079056 1.0936167437464026 1.2523844482438682 1.0 17.394471154549933 -1.0000000000108176 0.0644015316480283 0.8160908084386503 1.9696546362236182 0.377982767885934 0.08442858904468015 316.3328131123035 1.5178774925938845 5.161788341607828 33.657925264115214 0.09999999999750916 1.0000000000108176 1.1535638277849678 RRWS(ph)EDCR ddPTM_KYSE-520_SHP099_60min_R1 2 RRWSEDCR 8 2 P50548;P50548-2 P50548 ERF ETS domain-containing transcription factor ERF 1 RRWS(1)EDCR;RRWS(1)EDCR 61.353 0.025152 895670000.0 366460.0 336200.0 422170.0 334820.0 371060.0 494990.0 474930.0 558470.0 666670.0 529360.0 True False 346131.7332801012 320048.4473535115 449383.7536958834 366641.1921326962 400260.3109574014 491900.58380278206 522940.55927012913 556532.7979178779 545619.5333830732 524670.2822358487 0.659712861580578 0.6099991903289159 0.856506970017176 0.6988030474496827 0.7628797065687002 0.9375423012459926 0.9967032190991484 1.0607286457053544 1.0399284119122405 1.0 19.001051551276415 -6.340990622620275 1.46968817667995 1.039257665158322 0.7019366050790233 0.8557275131809896 0.060649476953876055 0.14858624604162746 0.6433523341497559 0.029509219871374465 0.025070909160276787 4.56046762904635e-07 6.340990622620275 -0.33732106007929874 RS(ph)AS(ph)PERMD ddPTM_KYSE-520_SHP099_60min_R1 3 RSASPERMD 9 2 Q16629;C9JAB2;Q16629-4;H7BZZ6 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 2 RS(1)AS(1)PERMD;RS(1)AS(1)PERMD;RS(1)AS(1)PERMD 70.685 0.01546 1307430000.0 1627010.0 1521230.0 1549880.0 1325200.0 1377320.0 1392560.0 1332100.0 1303900.0 1729300.0 1466870.0 True False 1536756.5119359738 1448147.8273872165 1649787.7446956777 1451146.6095640904 1485707.2481211883 1383868.5164960949 1466761.6680431617 1299377.0752325463 1415302.7121054614 1453874.6730075898 1.0570075539983985 0.9960609771071076 1.1347523795038041 0.998123591053515 1.0218949925358747 0.9518485617699942 1.0088638967820474 0.8937338956077703 0.9734695420325773 1.0 20.471471480656472 -5.966075316195356 1.4755679585281447 0.9594080804532313 1.053986702689905 0.4197221310600683 0.04581471928556303 0.36911259742996255 1.6534016766762654 0.017877516770171204 0.020557828496888066 1.0812464231759426e-06 5.966075316195356 0.09457862223667368 RS(ph)ASPDDDLGSSNWEAADLGNEER ddPTM_KYSE-520_SHP099_60min_R1 1 RSASPDDDLGSSNWEAADLGNEER 24 1 E9PM92;O00193;E9PQA1 E9PM92 C11orf58;SMAP Small acidic protein 1 RS(0.5)AS(0.5)PDDDLGSSNWEAADLGNEER 141.79 6.524200000000001e-08 567360000.0 289190.0 280850.0 236070.0 211110.0 227580.0 249990.0 200770.0 232610.0 304660.0 269740.0 True False 273148.0542140275 267357.54443555546 251287.4499253548 231173.83092746435 245489.25124692838 248429.71968091794 221065.7909263759 231803.13020158233 249341.42385361117 267350.3134545446 1.0216859321560834 1.0000270468394723 0.9399182917662042 0.864685094026527 0.9182306468051586 0.9292292066945956 0.8268768720331496 0.8670389318282732 0.9326393548291264 1.0 18.028371842660352 -4.846554174560007 2.7155493266748354 0.8981829689211198 1.0167336717036626 0.45529758408928056 0.04508633539744004 0.2166739192718643 3.1753955824885507 0.012107628708830939 0.03337872942171458 1.4237896298654414e-05 4.846554174560007 0.11855070278254276 RS(ph)ASPHDVDLCLVSPCEFEHR ddPTM_KYSE-520_SHP099_60min_R1 2 RSASPHDVDLCLVSPCEFEHR 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 RS(0.5)AS(0.5)PHDVDLCLVSPCEFEHR;RS(0.6)AS(0.4)PHDVDLCLVSPCEFEHR 138.78 1.1244e-06 582620000.0 314920.0 415720.0 354860.0 520590.0 327449.0 298552.0 300204.0 279419.0 428590.0 321021.0 True False 297450.7598225443 395748.1871915583 377734.84339607466 570066.717078909 353217.3733700477 296688.6262257585 330551.5500286986 278449.7607058851 350768.8598746772 318177.00369055854 0.9348593907554317 1.2437988371291635 1.18718461427036 1.7916653638278792 1.1101285425189544 0.9324640774928585 1.0388920198336358 0.875141061346753 1.1024330979488879 1.0 18.27947004278809 -5.992149495588403 24.997873130160155 0.9890786387374616 1.3003313541620258 0.3202658976598156 0.2055757373573932 223.0071371519146 710101.8976089697 0.06520927664455192 0.0738097438851308 1.0182408224362397e-06 5.992149495588403 0.31125271542456423 RS(ph)CTLPNYTK ddPTM_KYSE-520_SHP099_60min_R1 1 RSCTLPNYTK 10 1 A6NHR9;A0A2R8YCU7;J3KTL8;A6NHR9-2;A6NHR9-3 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 1 RS(0.996)CT(0.004)LPNYTK 80.905 0.010262 401740000.0 498050.0 480250.0 473900.0 475270.0 472150.0 487390.0 418790.0 491600.0 560190.0 504620.0 True False 470422.1736619392 457178.0691300541 504448.35226680996 520439.5179048638 509305.51883398066 484348.0182218591 461125.38019652833 489894.7543403022 458473.617240709 500149.4593884196 0.9405631953239922 0.9140829017171973 1.0085952164851824 1.0405679904987897 1.0183066466906854 0.9684065615388601 0.9219751647045471 0.9794967187195268 0.9166732236426456 1.0 18.931999753519833 -9.511655473615084 14.067344453511799 1.000000411444589 0.9699245311269444 0.047310208761688455 0.04246869373554327 0.0 0.0 0.04508693846160278 0.010935188800759513 3.0785380545896584e-10 9.511655473615084 -0.030075880317644632 RS(ph)DSMTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNAR ddPTM_KYSE-520_SHP099_60min_R1 1 RSDSMTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNAR 38 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 RS(0.574)DS(0.213)MT(0.213)FLGCIPPNPFEVPLAEAIPLADQPHLLQPNAR 157.78 2.7496999999999998e-08 1413900000.0 30929.0 63797.0 49951.0 31085.0 40717.0 49449.0 33261.0 37346.0 58708.0 32780.0 True False 29213.306714567083 60732.096358750685 53170.92138442581 34039.30905395397 43921.19625196062 49140.3704488248 36623.34647607809 37216.45544262195 48048.10710824463 32489.594702454113 0.8991588532300295 1.869278361732326 1.6365523137907758 1.0476987898954246 1.3518542368471902 1.5124956435702464 1.1272330975957583 1.1454884489467265 1.478876777266024 1.0 14.987690126159086 -10.011060300487594 0.17799443839525525 0.6935051570969659 1.4872165579656107 0.10774147024171088 0.2809697709833377 45.833179660315956 1.761335785034719 8.060981733487708 1.1940355408984697 9.748542727251488e-11 10.011060300487594 0.7937114008686448 RS(ph)EEHS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 RSEEHSPPR 9 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 2 RS(1)EEHS(1)PPR 63.76 0.029986000000000002 250540000.0 158780.0 155570.0 150250.0 139820.0 139950.0 161200.0 132130.0 146170.0 177890.0 159270.0 True False 149972.1568799171 148096.18368466944 159935.35540849998 153108.4507615841 150963.26879342514 160193.891005896 145486.9898645319 145662.9703863345 145589.66024197082 157858.99171018516 0.9500387355523747 0.9381548816462774 1.0131532811392008 0.9699064279003972 0.9563171990264581 1.0147910440223609 0.9216262456029928 0.9227410412816935 0.922276638566527 1.0 17.268276913904515 -6.795179780663433 24.999997754682628 0.9352227238324325 0.9729371740710783 0.18546934826803574 0.03176947994029802 274.2461235618305 203200.66626476508 0.013018869424452746 0.008777826672005053 1.6025818481358161e-07 6.795179780663433 0.037714450238645725 RS(ph)ESYSEDKCDMDSTNMDSNLKPEEVVHK ddPTM_KYSE-520_SHP099_60min_R1 1 RSESYSEDKCDMDSTNMDSNLKPEEVVHK 29 3 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RS(0.332)ES(0.332)Y(0.002)S(0.332)EDKCDMDS(0.001)T(0.001)NMDSNLKPEEVVHK 93.29 0.0023353000000000002 1066800000.0 118060.0 100040.0 100540.0 118760.0 116090.0 100380.0 130120.0 148470.0 158760.0 103980.0 True False 111510.9764532248 95233.92823689862 107020.96926968766 130046.91469350402 125225.62253825445 99753.49118592971 143273.79944882222 147954.99222315862 129933.18601391501 103058.81809521599 1.0820129564284335 0.9240735533073166 1.038445532829719 1.2618708141340582 1.2150888672384983 0.9679277623169278 1.390213880741885 1.4356364157646664 1.2607672823675293 1.0 16.653108426940953 -5.192390597286025 4.798595151332976 1.233525599636397 0.9997051341194545 0.29522258324447825 0.1433310815045409 0.26359506216079925 11.77163873921488 0.041158336589662024 0.07267559374430203 6.421099544501555e-06 5.192390597286025 -0.23382046551694247 RS(ph)ET(ph)PPHWR ddPTM_KYSE-520_SHP099_60min_R1 2 RSETPPHWR 9 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 RS(1)ET(1)PPHWR;RS(1)ET(1)PPHWR 93.649 0.0040449 1621510000.0 645810.0 564610.0 513240.0 538840.0 527460.0 555430.0 494590.0 546480.0 711270.0 557510.0 True False 609985.6319096816 537485.2881031121 546324.2716130348 590051.1915918463 568968.1011631292 551963.3553437024 544587.9839332385 544584.3884293906 582121.2976575785 552570.8951362162 1.1039047428643738 0.9726992370284264 0.9886953446550211 1.067828937038732 1.0296743932249108 0.9989005215478024 0.9855531457171487 0.9855466388528176 1.053478029301702 1.0 19.075800049347883 -6.257425900357863 23.03467844679753 1.0025959241177873 1.0287573071428233 0.10889349817179095 0.038874871764619304 299.15266002534685 1716938.3720370296 0.013145377996127866 0.012680726917751515 5.528077203559394e-07 6.257425900357863 0.02616138302503601 RS(ph)FNGTDNHIR ddPTM_KYSE-520_SHP099_60min_R1 2 RSFNGTDNHIR 11 1 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 RS(0.999)FNGT(0.001)DNHIR;RS(0.999)FNGT(0.001)DNHIR 81.327 0.0056841999999999995 635560000.0 652510.0 579110.0 553570.0 503570.0 669360.0 717490.0 491710.0 528190.0 702970.0 545410.0 True False 616313.9695535629 551288.6863381687 589254.007943316 551429.1413961594 722034.8238625727 713011.8787705984 541416.8454271473 526357.832170473 575328.3684316059 540578.0917225587 1.140101641170235 1.0198132236204402 1.0900441896667528 1.0200730474278448 1.3356716354556653 1.3189803465741228 1.0015515865652562 0.9736943472740955 1.0642835461539237 1.0 19.04414351867404 RS(ph)FSKEVEER ddPTM_KYSE-520_SHP099_60min_R1 4 RSFSKEVEER 10 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 RS(0.639)FS(0.361)KEVEER;RS(0.701)FS(0.299)KEVEER;RS(0.693)FS(0.307)KEVEER;RS(0.673)FS(0.327)KEVEER 146.79 0.00014058 12183800000.0 11433000.0 10353500.0 10233200.0 9173400.0 9760400.0 8802600.0 7905200.0 8353700.0 13117100.0 7798200.0 True False 10798788.698879553 9856102.31907966 10892848.445698919 10045237.177916728 10528487.950920649 8747659.708241314 8704334.763317173 8324722.964468239 10735365.295182176 7729114.014907789 1.3971573815641773 1.2751917360863574 1.4093269195782299 1.299662181013456 1.3621856179910754 1.1317803944111795 1.1261749725166939 1.0770604429449027 1.3889516022762736 1.0 22.881871617425634 -6.261484542315335 24.99973983478163 1.1484460974966952 1.3452640242291618 0.5098255342642035 0.09991084775185965 3.5174105366778243 1946759.2661375143 0.032438944485516125 0.030437186199563378 5.476655934761743e-07 6.261484542315335 0.19681792673246656 RS(ph)FSSQRPVDR ddPTM_KYSE-520_SHP099_60min_R1 3 RSFSSQRPVDR 11 2 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 RS(0.578)FS(0.331)S(0.09)QRPVDR;RS(0.436)FS(0.282)S(0.282)QRPVDR;RS(0.595)FS(0.347)S(0.058)QRPVDR 82.925 0.004917800000000001 11557000000.0 2371320.0 2604450.0 2587660.0 2226190.0 2213210.0 2092060.0 2143640.0 2254270.0 2725800.0 2169080.0 True False 2239778.152490776 2479328.3126408523 2754464.70400239 2437766.428271572 2387377.035557673 2079002.6775297434 2360340.0511103095 2246450.463520573 2230863.431826208 2149863.638718705 1.0418233566784072 1.1532491028679868 1.2812276343461582 1.133916767727861 1.11047835432973 0.9670393229073849 1.097902215099115 1.044926953999479 1.037676711977778 1.0 21.03581372496069 -5.96761779543188 3.3195271017478785 1.0362958536126425 1.1613727922909913 0.45493519997041487 0.06316014642332991 0.23224234420048417 5.332245572826133 0.02163912189543156 0.023974004585096288 1.077412983020311e-06 5.96761779543188 0.1250769386783488 RS(ph)GKNSQEDS(ph)EDS(ph)EDKDVK ddPTM_KYSE-520_SHP099_60min_R1 1 RSGKNSQEDSEDSEDKDVK 19 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 RS(0.576)GKNS(0.438)QEDS(0.986)EDS(1)EDKDVK 98.565 0.00035127 1341400000.0 1276700.0 1145800.0 1031100.0 1015800.0 1110800.0 1079800.0 1043100.0 1072800.0 1385000.0 1075200.0 True False 1205878.9059616462 1090754.048119137 1097566.3558183305 1112341.3265885927 1198213.6404125504 1073060.5676685285 1148546.727674966 1069078.7071934016 1133518.9130087697 1065674.564492941 1.1315639371907276 1.0235339046851786 1.029926388775699 1.0437908191210854 1.1243710606742998 1.0069308243076083 1.077764981865225 1.0031943548376614 1.063663289691173 1.0 20.023335504725747 -8.211436436405435 0.007784095722123562 1.0845523152182377e-07 2.065718685105347 0.19295143062386588 0.04099779759926615 5530.091584256946 23.290496776109606 3132.5579467773027 3045.802847703028 6.145589723346127e-09 8.211436436405435 2.0657185766501156 RS(ph)HSPSIDGTPK ddPTM_KYSE-520_SHP099_60min_R1 2 RSHSPSIDGTPK 12 1 A0A0C4DH56;Q9BWT3-2;Q9BWT3 A0A0C4DH56 PAPOLG Poly(A) polymerase gamma 1 RS(0.858)HS(0.137)PS(0.006)IDGTPK;RS(0.808)HS(0.191)PS(0.001)IDGTPK 120.54 8.1244e-05 936420000.0 958240.0 1036970.0 840380.0 1175610.0 890380.0 889220.0 859250.0 771680.0 1157700.0 804970.0 True False 905084.5169959188 987152.404676297 894552.2394555409 1287339.6209399663 960447.8404307947 883670.0481405896 946111.3754718768 769003.2221914664 947490.8632420582 797838.5920571827 1.1344205783054546 1.2372833484163497 1.1212195654123316 1.6135339074293615 1.203812212134704 1.1075799753708269 1.1858430826620971 0.9638581410415784 1.1875721138018724 1.0 19.60573738380189 -6.164920712125665 4.260158735660468 1.0925231147492438 1.2770438710474403 0.27403004080762206 0.14297623897667666 0.3270536839210593 10.381800278456437 0.049061712312042594 0.048920982090937995 6.840365184304751e-07 6.164920712125665 0.18452075629819653 RS(ph)ISSPNVNR ddPTM_KYSE-520_SHP099_60min_R1 2 RSISSPNVNR 10 1 Q9NQT8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 RS(0.466)IS(0.463)S(0.071)PNVNR;RS(0.632)IS(0.32)S(0.048)PNVNR 101.38 0.0020442999999999998 1721940000.0 1656370.0 1536550.0 1595750.0 1324350.0 1442450.0 1309790.0 1189210.0 1430660.0 1817570.0 1313370.0 True False 1564487.8542082652 1462731.83159143 1698614.598290276 1450215.8258196523 1555962.6085821805 1301615.1147680685 1309426.952371151 1425697.3743785545 1487545.10521108 1301734.5635863969 1.201848593386012 1.1236790298949049 1.3048855318172075 1.114064162070166 1.1952994505234327 0.9999082387287933 1.0059093374332482 1.0952289462535503 1.1427407298095844 1.0 20.312003868182625 -6.249557987043877 24.535669390783283 1.0520312529757447 1.1867755114999101 0.5402940333290643 0.06415877487895792 490.3791583268125 1012657.779845445 0.021425852250556668 0.021248935550272328 5.629139520475573e-07 6.249557987043877 0.13474425852416538 RS(ph)LESCLLDLR ddPTM_KYSE-520_SHP099_60min_R1 2 RSLESCLLDLR 11 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RS(0.539)LES(0.461)CLLDLR;RS(1)LESCLLDLR 150.37 3.6172e-05 608900000.0 378450.0 374850.0 408170.0 355180.0 408220.0 426330.0 353290.0 345640.0 435460.0 367660.0 True False 357456.6240786288 356841.6433386793 434481.2912950912 388936.2004112392 440344.5915459235 423669.1163309165 389004.00097813073 344441.0555129821 356391.44105328416 364402.8184351519 0.9809381431615924 0.9792505032509287 1.1923104578632953 1.0673248963370825 1.2084006195036772 1.1626395156609128 1.0675109557292208 0.9452206132546086 0.9780150509914527 1.0 18.475174591992506 -7.12957778833798 4.62498835066392 0.9722119593135264 1.1018323129815424 0.35411784060513085 0.07470525651074122 0.2669801417880065 8.804870159727793 0.03960153801498847 0.02227318351334115 7.420312774466018e-08 7.12957778833798 0.12962035366801594 RS(ph)LSVEHLETK ddPTM_KYSE-520_SHP099_60min_R1 3 RSLSVEHLETK 11 1 J3KN34;P26045-2;P26045 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 RS(0.608)LS(0.391)VEHLET(0.001)K;RS(0.904)LS(0.096)VEHLETK;RS(0.517)LS(0.483)VEHLETK 161.82 1.3125e-05 1553020000.0 2171330.0 2506540.0 2232650.0 2866860.0 2414730.0 2130050.0 1915840.0 1834480.0 2661440.0 1841190.0 True False 2050881.996460957 2386122.056006758 2376570.191366302 3139325.5124471146 2604755.513065717 2116755.567848068 2109511.803996556 1828116.6170508512 2178189.585442638 1824878.4890241465 1.1238457841418614 1.3075511988103583 1.3023169518739697 1.720292902419968 1.4273583302845605 1.1599432951724928 1.1559738452090678 1.0017744348712425 1.1936080120092953 1.0 20.79936897352587 -6.388756911712395 3.798471462925633 1.095089770388847 1.3867525314863254 0.45560517386063304 0.15079408253557164 0.2444736366684923 6.230209772357965 0.06003918383142584 0.05205668987485868 4.085479995169672e-07 6.388756911712395 0.29166276109747846 RS(ph)LTNSHLEK ddPTM_KYSE-520_SHP099_60min_R1 7 RSLTNSHLEK 10 1 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 RS(0.962)LT(0.037)NS(0.001)HLEK;RS(0.969)LT(0.03)NS(0.002)HLEK;RS(0.725)LT(0.275)NS(0.001)HLEK;RS(0.999)LT(0.001)NSHLEK;RS(0.969)LT(0.027)NS(0.004)HLEK;RS(0.909)LT(0.091)NSHLEK;RS(0.991)LT(0.009)NSHLEK 186.29 2.5901999999999998e-06 14431350000.0 11333250.0 12000170.0 9944030.0 14217580.0 12787660.0 12558490.0 13863920.0 14578090.0 18397210.0 11119120.0 True False 10704572.030226247 11423663.820577616 10585038.084810548 15568814.528528694 13793976.090167409 12480107.80557465 15265420.332420204 14527522.00834178 15056740.41992351 11020613.24734446 0.9713227195234017 1.0365724269772623 0.9604763226185377 1.4126994731695328 1.2516523155815509 1.1324331528086127 1.3851697713916762 1.3182135768934953 1.3662343539323096 1.0 23.39370116981631 -5.248615492570307 24.980656108051164 1.278611531675824 0.9941686571241708 0.5306348433483163 0.11906083795581107 568.5750350805833 1107570.473380625 0.031136149051767675 0.05347353358490223 5.641368996401617e-06 5.248615492570307 -0.2844428745516532 RS(ph)NS(ph)PDKFK ddPTM_KYSE-520_SHP099_60min_R1 10 RSNSPDKFK 9 2 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 2 RS(1)NS(1)PDKFK;RS(1)NS(1)PDKFK;RS(1)NS(1)PDKFK;RS(1)NS(1)PDKFK;RS(1)NS(1)PDKFK;RS(1)NS(1)PDKFK;RS(1)NS(1)PDKFK;RS(1)NS(1)PDKFK;RS(1)NS(1)PDKFK;RS(1)NS(1)PDKFK 128.54 0.00035324 31609660000.0 39381590.0 34397150.0 32261870.0 35722260.0 35265210.0 33325420.0 34320700.0 36826020.0 40133860.0 33853210.0 True False 37197014.697446615 32744659.282825213 34341521.761017084 39117292.85011093 38040381.39540249 33117423.692343082 37790171.293753415 36698279.131877676 32846562.71627879 33553296.89679882 1.1085949262111237 0.9758999058584089 1.0234917262122598 1.1658256108311953 1.1337300627239335 0.9870095267896812 1.126272968346035 1.093730945270505 0.9789369675744903 1.0 24.9999511946601 -9.444608822306268 8.943267080863357 1.0000071061252955 1.0672481960436746 0.08050064022076076 0.06672961343417327 0.0 0.0 0.06558671782393229 0.01590711560150902 3.5924536842328346e-10 9.444608822306268 0.06724108991837907 RS(ph)NSPDKFK ddPTM_KYSE-520_SHP099_60min_R1 3 RSNSPDKFK 9 2 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 RS(0.817)NS(0.183)PDKFK;RS(0.893)NS(0.107)PDKFK;RS(0.896)NS(0.104)PDKFK 114.87 0.00064971 35873700000.0 37747300.0 32487200.0 30146400.0 30114500.0 30378500.0 31326800.0 29902100.0 31444900.0 36411700.0 27424100.0 True False 35653382.02162303 30926466.147718612 32089685.179945454 32976573.0257454 32769115.119979043 31131277.82111357 32924896.08437315 31335824.981194843 29800253.14426091 27181143.80962696 1.3116954264814784 1.1377911968798438 1.180586269830926 1.213215060289914 1.2055826402850989 1.1453262614389157 1.211313854743371 1.1528515944975202 1.0963575835136974 1.0 24.696102831639713 -7.993034097700235 1.1088702943900106 0.9992828391031015 1.1990241011673572 0.6694137619531483 0.0449389064049707 0.30659541600998735 0.8491928153727907 0.04085279321113856 0.013193115460709677 1.0161689074152737e-08 7.993034097700235 0.1997412620642558 RS(ph)NSTTQVSQPR ddPTM_KYSE-520_SHP099_60min_R1 1 RSNSTTQVSQPR 12 1 I3L2J8;Q9UPN4-3;Q9UPN4-2;Q9UPN4 I3L2J8 CEP131 Centrosomal protein of 131 kDa 1 RS(0.581)NS(0.408)T(0.011)TQVSQPR 81.311 0.0055244 354380000.0 108040.0 107290.0 89701.0 77075.0 97518.0 115850.0 86851.0 97270.0 122700.0 94563.0 True False 102046.80582759964 102135.62735442682 95483.2699866746 84400.18482655626 105192.11179847964 115126.93717762447 95630.74666407674 96932.59307298873 100420.77301528951 93725.24538890064 1.0887867554165345 1.0897344352701175 1.018757215203644 0.9005064161352551 1.1223455469441423 1.2283450067259927 1.0203307152440035 1.034220744589994 1.0714378244474758 1.0 16.516150077292867 -3.4554152278629573 21.769490506148202 1.0593779709680216 1.0839149851711694 0.0 0.08186582973346863 0.0 0.0 0.019813593842582407 0.0 0.00035041668123115996 3.4554152278629573 0.0245370142031478 RS(ph)NTLDIMDGR ddPTM_KYSE-520_SHP099_60min_R1 4 RSNTLDIMDGR 11 1 O94915;H0Y9X0;A0A2C9F2R7;A0A286YEZ9 O94915 FRYL Protein furry homolog-like 1 RS(0.895)NT(0.105)LDIMDGR;RS(0.5)NT(0.5)LDIMDGR;RS(0.5)NT(0.5)LDIMDGR;RS(0.5)NT(0.5)LDIMDGR 128.9 0.00010447 1428430000.0 1603750.0 1625390.0 1340430.0 1362590.0 1578310.0 1589860.0 1282980.0 1406450.0 1621320.0 1403360.0 True False 1514786.7905036344 1547303.82463987 1426836.262563829 1492090.1439223788 1702514.0176445222 1579937.0940113785 1412676.1390781591 1401571.3532178963 1326929.1581511744 1390927.322197559 1.0890481237440837 1.1124260771549501 1.0258165468412372 1.0727304871436347 1.2240136421755523 1.135887597286678 1.0156361993423486 1.0076524710173358 0.9539888511606254 1.0 20.40761560843909 -6.873818031839735 4.735655775503427 0.9904259805544691 1.1095180635143362 0.5710219786023969 0.04944465357218527 0.17963032591234906 6.64997508587693 0.023688935455020023 0.015757390806230287 1.3371556636314483e-07 6.873818031839735 0.11909208295986717 RS(ph)PASIDR ddPTM_KYSE-520_SHP099_60min_R1 2 RSPASIDR 8 1 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 RS(1)PASIDR;RS(1)PASIDR 91.93700000000001 0.0026671 1182000000.0 535670.0 472970.0 566600.0 486060.0 500040.0 571290.0 454430.0 489890.0 2095820.0 578860.0 True False 505955.3172683292 450247.8112575568 603123.9425920536 532254.9962607323 539390.3031615881 567724.3672007348 500368.21920940967 488190.685931186 1715271.9193227703 573731.7507462653 0.8818673824661476 0.7847706017174572 1.0512298505487228 0.9277070609538633 0.9401437212773941 0.98952928169355 0.8721292111837455 0.8509040772036511 2.989675779825117 1.0 19.13001683446377 -7.716255800697585 24.999996688888544 1.9948436683198665 0.9153441847041709 0.480358067416105 0.4503702347596204 82.38807600161381 45585.17641340118 0.270352407205727 0.10218263162361102 1.9219593558749402e-08 7.716255800697585 -1.0794994836156957 RS(ph)PERPTGDLR ddPTM_KYSE-520_SHP099_60min_R1 6 RSPERPTGDLR 11 2 Q5T200-2;Q5T200;Q5T9K0 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 RS(1)PERPTGDLR;RS(0.998)PERPT(0.002)GDLR;RS(0.997)PERPT(0.003)GDLR;RS(1)PERPTGDLR;RS(0.995)PERPT(0.005)GDLR;RS(0.983)PERPT(0.017)GDLR 98.943 0.0011004 7874920000.0 6197310.0 5950960.0 5804200.0 5298330.0 5544280.0 5401400.0 5528050.0 5366430.0 6851030.0 5213580.0 True False 5853532.860268804 5665066.949026938 6178348.019048359 5801881.690198998 5980583.293361998 5367687.8590524085 6086879.242568875 5347815.106864174 5607055.652411882 5167391.737303868 1.1327828734197993 1.0963107186417294 1.1956415021617786 1.1227872755058785 1.1573698293836767 1.0387615516552742 1.1779403521175187 1.0349157522271466 1.085084301221841 1.0 22.301004827200153 -7.813595379092995 0.5395306436399039 0.9986674155603306 1.140325966618614 0.4526528410182773 0.045699922027494295 0.7643248916763316 0.5540577657339717 0.04653346312599568 0.023347512571001493 1.5360474118910607e-08 7.813595379092995 0.1416585510582835 RS(ph)PESCSKPEK ddPTM_KYSE-520_SHP099_60min_R1 4 RSPESCSKPEK 11 2 Q03111 Q03111 MLLT1 Protein ENL 1 RS(0.664)PES(0.318)CS(0.018)KPEK;RS(0.823)PES(0.153)CS(0.024)KPEK;RS(1)PESCSKPEK;RS(1)PESCSKPEK 178.22 3.4588e-06 38241800000.0 18275890.0 16185210.0 15524950.0 16009880.0 15810030.0 15189800.0 15717390.0 15656300.0 19466270.0 15032200.0 True False 17262089.94961653 15407648.217104496 16525713.11779826 17531454.181654055 17054189.41423447 15094994.823829772 17306257.168144226 15601991.949507885 15931686.072733002 14899026.402874615 1.158605232506064 1.0341379228733865 1.1091807391260002 1.176684550224808 1.1446512646587457 1.013153102468316 1.161569669062749 1.0471819787162495 1.069310547007229 1.0 23.82871472311129 -7.976176934736921 0.7287775962126924 1.0000159498330803 1.1141693535464734 0.3113274203654772 0.052527291654040555 0.9269287052158436 1.1369880295897346 0.05153397407353923 0.020206087358020496 1.0563870417524143e-08 7.976176934736921 0.11415340371339311 RS(ph)PGPGPSQSPR ddPTM_KYSE-520_SHP099_60min_R1 1 RSPGPGPSQSPR 12 1 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 RS(0.887)PGPGPS(0.025)QS(0.088)PR 63.185 0.028943 0.0 206920.0 178160.0 173120.0 155890.0 173030.0 177990.0 124650.0 165580.0 176760.0 173850.0 True False 195441.73511520628 169600.9261763879 184279.59220179392 170705.7387299625 186646.47659397154 176879.098387962 137250.83846676673 165005.64162666237 144664.83975698912 172309.82425325317 1.1342460359541362 0.9842789110336283 1.0694665437702966 0.9906906902711882 1.0832027564467073 1.0265177807157015 0.7965351892242758 0.9576101788841973 0.8395623429130036 1.0 17.394645433674615 -6.629984715224926 7.860221329742388 0.8953632313575167 1.0469089481086318 0.549783276119517 0.06654320089490699 0.17053017888022098 11.36680885386651 0.023423931572340222 0.01809387449311794 2.3443113207216535e-07 6.629984715224926 0.15154571675111506 RS(ph)PGTPRPPGASK ddPTM_KYSE-520_SHP099_60min_R1 2 RSPGTPRPPGASK 13 2 Q9Y3X0;M0QYB4;A0A2R8Y4Z8 Q9Y3X0;A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 RS(0.97)PGT(0.03)PRPPGASK;RS(0.969)PGT(0.031)PRPPGASK 88.133 0.0022657 538420000.0 1152370.0 1052090.0 989390.0 1086340.0 1002500.0 1109770.0 1001990.0 1082680.0 1265170.0 1021890.0 True False 1088445.7389073584 1001546.0171807137 1053167.6624799718 1189585.4269799686 1081391.0465552588 1102843.5137817203 1103280.927680029 1078924.435779411 1035447.0203402912 1012836.8496183896 1.0746506106264362 0.9888522693048442 1.0398196539519446 1.174508438775873 1.0676853305275165 1.088865905893178 1.0892977759406328 1.0652499819550618 1.022323605949389 1.0 19.949970369126643 -9.865617524343607 9.525226232702344 0.9999999999933976 1.06906000220952 0.1618261599001246 0.04630490695268302 0.0 0.0 0.0471925033836376 0.011445863305179806 1.3626442114305576e-10 9.865617524343607 0.06906000221612241 RS(ph)PILLPK ddPTM_KYSE-520_SHP099_60min_R1 6 RSPILLPK 8 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 RS(1)PILLPK;RS(1)PILLPK;RS(1)PILLPK;RS(1)PILLPK;RS(1)PILLPK;RS(1)PILLPK 116.25 0.0013353 3745880000.0 7417210.0 6485250.0 6030780.0 6140120.0 6893890.0 6463760.0 6051380.0 6678740.0 7904820.0 6344050.0 True False 7005762.575458432 6173688.855441294 6419533.728389165 6723675.1587056 7436399.922131502 6423417.276229971 6663112.546177478 6655573.00976964 6469503.952296008 6287846.652596211 1.1141751640151398 0.981844691281111 1.0209431118582672 1.069312839544113 1.1826624173573095 1.0215607394906465 1.0596811459176285 1.0584820809873914 1.0288902242272069 1.0 22.584134603040816 -9.759223902353394 7.735622354201562 0.9999999919024942 1.0590336550139092 0.10224587449397693 0.05305931909091765 4.014066911102827e-11 0.0 0.0525786915233096 0.01275220581219844 1.7409091089485108e-10 9.759223902353394 0.059033663111415 RS(ph)PLGQK ddPTM_KYSE-520_SHP099_60min_R1 10 RSPLGQK 7 1 A0A2R8Y6S3;C9J167;Q68D20;P54278-3;P54278 A0A2R8Y6S3 PMS2;PMS2CL Protein PMS2CL;Mismatch repair endonuclease PMS2 1 RS(1)PLGQK;RS(1)PLGQK;RS(1)PLGQK;RS(1)PLGQK;RS(1)PLGQK;RS(1)PLGQK;RS(1)PLGQK;RS(1)PLGQK;RS(1)PLGQK;RS(1)PLGQK 75.21300000000001 0.013987000000000001 28642660000.0 26541250.0 22995210.0 21102400.0 21269750.0 22936450.0 22609290.0 22562150.0 21700000.0 26242840.0 23029470.0 True False 25068953.953829832 21890485.595086098 22462694.46903379 23291220.6450165 24741418.124451254 22468177.03461969 24842952.30736435 21624727.764818072 21477801.784161028 22825446.812456515 1.0982897360041588 0.9590386455497475 0.9841075468794432 1.020405902078806 1.0839401448627564 0.9843477422031514 1.0883884338161924 0.9473955950346096 0.9409586572666767 1.0 24.44413976572688 -7.295253854996875 24.97801828588385 0.958132821297058 1.0264382579314597 0.29822535502024494 0.04755273687766975 811.4072029756783 599364.3581300825 0.025459907139441247 0.012231396499628634 5.066944472750945e-08 7.295253854996875 0.0683054366344017 RS(ph)PPAPGLQPMR ddPTM_KYSE-520_SHP099_60min_R1 7 RSPPAPGLQPMR 12 1 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR;RS(1)PPAPGLQPMR 169.15 1.5456999999999999e-06 11132200000.0 7507510.0 7152620.0 6475240.0 6132290.0 6845110.0 6562570.0 6436660.0 6689770.0 7809120.0 6476280.0 True False 7091053.454449858 6808997.3988985 6892644.331150308 6715100.997859778 7383781.21365174 6521610.566368256 7087340.408547924 6666564.749274061 6391180.659895325 6418905.197669602 1.1047138470006195 1.060772388626416 1.0738037280333566 1.0461442864583372 1.1503178480237468 1.0160004495370865 1.1041353922972719 1.0385828336730027 0.9956807996191714 1.0 22.613895822967507 -7.550674992199883 3.5489868262595152 0.9988800961688348 1.0774817151430554 0.4736501855885734 0.034497194646666375 0.19986827301084123 5.2463573168482425 0.0242589336879256 0.0085507515205321 2.8140059267905293e-08 7.550674992199883 0.07860161897422058 RS(ph)PPEEPPDFCCPK ddPTM_KYSE-520_SHP099_60min_R1 1 RSPPEEPPDFCCPK 14 1 A0A087X0G7;A0A087WUW6;A0A087X1B1;Q9Y6K9-3;Q9Y6K9;Q9Y6K9-2 A0A087X0G7 IKBKG NF-kappa-B essential modulator 1 RS(1)PPEEPPDFCCPK 79.51100000000001 0.006713500000000001 0.0 275040.0 263300.0 235790.0 211130.0 247380.0 244750.0 209330.0 211790.0 312800.0 284160.0 True False 259782.98292135308 250650.6727786429 250989.4006773392 231195.73172145063 266847.3986003393 243222.4244645972 230491.11926392515 211055.3499221574 256003.4050463127 281642.56347313477 0.9223853799574337 0.8899602023490029 0.891162889522842 0.8208834945627949 0.94746829211343 0.8635854661498904 0.8183816977859285 0.7493730610866616 0.9089656119066402 1.0 18.103505853409732 -6.51323816436081 24.02485804231126 0.8472500893543966 0.8914320565113959 0.0 0.06828773239188679 742.2324198585472 1849697.6951223274 0.02423413611336862 0.019890038285331323 3.0673394174442655e-07 6.51323816436081 0.04418196715699929 RS(ph)PPPGPDGHAK ddPTM_KYSE-520_SHP099_60min_R1 1 RSPPPGPDGHAK 12 1 P57081-3;P57081-2;P57081 P57081-3 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 1 RS(1)PPPGPDGHAK 107.5 0.000275 622550000.0 651680.0 556000.0 626980.0 676090.0 642160.0 629320.0 672270.0 701030.0 700390.0 632860.0 True False 615530.0113081279 529288.9254269853 667396.13400347 740345.3903261295 692694.3386094017 625392.1804455989 740229.6123229308 698598.2905516325 573216.8313950981 627253.3527576291 0.9813100378053601 0.8438200020773785 1.0639977149095479 1.1802972229184707 1.104329431742486 0.9970328220585066 1.180112643589098 1.1137418197612585 0.9138521601758409 1.0 19.25868875150032 -4.835379711081303 7.468792316688342 1.0805818073979154 0.9133188287576351 0.346050001786816 0.08508794551223647 0.20905250573513737 17.764198271640286 0.022000829998424114 0.04644643911132622 1.4608993266892173e-05 4.835379711081303 -0.16726297864028028 RS(ph)PPWEP ddPTM_KYSE-520_SHP099_60min_R1 5 RSPPWEP 7 1 H0YAQ0;F5H8F7;Q9UBL3-2;Q9UBL3-3;Q9UBL3 H0YAQ0 ASH2L Set1/Ash2 histone methyltransferase complex subunit ASH2 1 RS(1)PPWEP;RS(1)PPWEP;RS(1)PPWEP;RS(1)PPWEP;RS(1)PPWEP 113.18 0.0030214 9363850000.0 6435100.0 6202800.0 5596000.0 5104900.0 5457300.0 5893900.0 5349640.0 5534760.0 6437500.0 5438500.0 True False 6078132.174946192 5904808.177407378 5956727.113916578 5590068.161155846 5886758.462210497 5857113.983868796 5890433.818655069 5515561.209382702 5268612.276168908 5390319.121088978 1.127601546106283 1.095446864046606 1.1050787495329537 1.0370569971053056 1.0920983210769952 1.086598743468367 1.0927801650201845 1.023234633326945 0.9774212171513359 1.0 22.36193925617653 -7.406226127146628 3.0747594320965206 0.9899539265609442 1.0897082032025298 0.7867920070389598 0.0220619905559201 0.12311516413253827 2.1717298603925856 0.015472817487634868 0.0062117400633838514 3.9244054742844495e-08 7.406226127146628 0.09975427664158565 RS(ph)PQQTVPYVVPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 RSPQQTVPYVVPLSPK 16 1 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 2 RS(0.994)PQQT(0.006)VPYVVPLS(1)PK;RS(0.915)PQQT(0.085)VPYVVPLS(1)PK;RS(1)PQQTVPYVVPLS(1)PK;RS(1)PQQTVPYVVPLS(1)PK 161.04 4.4445e-08 2527420000.0 1937500.0 1724600.0 1768050.0 1754850.0 1788740.0 1674810.0 1772480.0 1932200.0 2366520.0 1823480.0 True False 1830023.0126895073 1641747.6273226235 1882021.3319800217 1921630.4163851074 1929503.6614616008 1664356.8895507746 1951659.5761377858 1925497.6491788684 1936819.6231144494 1807325.3858459718 1.0125586831354727 0.9083851973639795 1.0413295506824778 1.0632454075145035 1.0676017039169956 0.9208949880221615 1.0798606556529133 1.0653851621065913 1.0716496532846873 1.0 20.78542483772157 -4.787901411008915 24.84999537642138 1.0402460755693979 0.9604719544664588 0.27531021824698254 0.05075079926586083 224.6077276982417 210924.5748960047 0.013277288340800171 0.02765272546300438 1.629665940369285e-05 4.787901411008915 -0.07977412110293902 RS(ph)PRPDHPGT(ph)PPHK ddPTM_KYSE-520_SHP099_60min_R1 1 RSPRPDHPGTPPHK 14 2 P30291 P30291 WEE1 Wee1-like protein kinase 2 RS(1)PRPDHPGT(1)PPHK 108.18 0.0013475 724180000.0 284930.0 271620.0 258210.0 253710.0 289360.0 241310.0 283580.0 258780.0 356950.0 246590.0 True False 269124.36490612687 258570.96749006805 274854.6297506074 277822.52211930713 312130.9857668132 239803.8947806006 312247.03387409355 257882.35257970603 292136.8779772415 244405.4044441172 1.1011391729173552 1.057959287267683 1.1245849099603376 1.136728227230469 1.2771034522609395 0.9811726353843018 1.2775782703507614 1.0551417762886266 1.1952963095954696 1.0 17.89891666171506 -4.908874827298142 5.225007072371925 1.1393743601716144 1.080120277937397 0.03948894436369765 0.09680395634394723 0.6029232652049943 26.738811000641302 0.02362284979985342 0.05099635951733705 1.2334602909098435e-05 4.908874827298142 -0.05925408223421735 RS(ph)PRPPR ddPTM_KYSE-520_SHP099_60min_R1 3 RSPRPPR 7 2 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 RS(1)PRPPR;RS(1)PRPPR;RS(1)PRPPR 57.96 0.037689 518380000.0 277261.0 191382.0 63430.0 648410.0 107094.0 175257.0 172625.0 522590.0 100781.0 92323.0 True False 261880.77962389906 182187.72144976148 67518.7992915883 710034.6914484246 115521.68851849274 174163.15605471667 190075.61965764628 520777.2572634235 82481.7108822648 91505.09004620701 2.8619258173688262 1.991011880953975 0.7378693278974269 7.759510329861222 1.262461885564597 1.903316591096409 2.077213623435204 5.691238126758287 0.9013893198795203 1.0 16.481564376281387 RS(ph)PS(ph)LSSK ddPTM_KYSE-520_SHP099_60min_R1 1 RSPSLSSK 8 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RS(0.993)PS(0.664)LS(0.329)S(0.013)K 68.786 0.027387 436390000.0 993280.0 818230.0 829680.0 919260.0 881330.0 874630.0 795490.0 943870.0 1078900.0 841650.0 True False 938180.7783454092 778921.0026117313 883162.5003349364 1006626.1940144034 950685.6569182518 869171.1097424756 875905.8924342426 940595.9352709138 882998.9568557118 834193.6357937919 1.124655880948632 0.9337412432672603 1.058702035642537 1.2067056745842113 1.1396462597243502 1.0419296820880206 1.0500030866343864 1.127551080362622 1.0585059858619976 1.0 19.670022780138225 -4.999819822905626 24.99999998055338 1.0960601215525176 1.0209543283916227 0.09889031322408703 0.0701307490014786 11.427774555201575 1584543.45676298 0.018189515412005086 0.03727600413371046 1.0004149591633485e-05 4.999819822905626 -0.07510579316089494 RS(ph)PS(ph)PKPTK ddPTM_KYSE-520_SHP099_60min_R1 4 RSPSPKPTK 9 2 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 RS(1)PS(1)PKPTK;RS(1)PS(1)PKPT(0.001)K;RS(1)PS(0.992)PKPT(0.008)K;RS(0.998)PS(0.981)PKPT(0.021)K 105.17 0.0013005 14188780000.0 17548060.0 14416680.0 12313600.0 15040840.0 14757270.0 15069390.0 13541530.0 13865090.0 17765030.0 15317130.0 True False 16574634.130609663 13724081.052922158 13107354.358456606 16470316.911406545 15918583.191619493 14975336.347303595 14910440.004997019 13816995.238926327 14539348.37196256 15181432.144746799 1.0917701289693509 0.9040043733733694 0.8633806240073416 1.0848987601677444 1.0485560940393734 0.9864244825206087 0.9821497644513366 0.9101246250807369 0.9577059814474475 1.0 23.855804558434325 -9.475198944798693 6.8421340599488225 0.9999999999709576 0.9784289184061435 0.0049757725258446905 0.07283384602650501 0.0 0.0 0.07309517119214388 0.017728183164309637 3.3481203087477643e-10 9.475198944798693 -0.02157108156481402 RS(ph)PS(ph)PYYSR ddPTM_KYSE-520_SHP099_60min_R1 8 RSPSPYYSR 9 1 P62995;P62995-3;H7C2L4;H7BXF3;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RS(1)PS(0.999)PY(0.001)YSR;RS(1)PS(0.998)PY(0.001)Y(0.001)SR;RS(0.955)PS(0.997)PY(0.044)Y(0.002)S(0.001)R;RS(0.975)PS(0.998)PY(0.025)Y(0.001)SR;RS(0.674)PS(0.949)PY(0.294)Y(0.039)S(0.045)R;RS(0.599)PS(0.864)PY(0.33)Y(0.044)S(0.162)R;RS(0.986)PS(0.688)PY(0.265)Y(0.006)S(0.054)R;RS(0.766)PS(0.92)PY(0.303)Y(0.005)S(0.007)R 101.71 0.0025036999999999998 51522300000.0 25067940.0 22622240.0 23034670.0 23430740.0 22916350.0 21864480.0 22951750.0 24722690.0 27170900.0 22833110.0 True False 23677371.39650054 21535433.63372551 24519521.684975106 25657590.484891135 24719736.36880464 21728015.67010294 25271936.87749392 24636932.758709196 22237349.48264978 22630826.409290798 1.0462442231795872 0.9515973143996372 1.083456752375111 1.1337451854766443 1.0923037418844002 0.9601070361788812 1.1167041105984026 1.0886448560532822 0.982613232078901 1.0 24.431785932635012 -4.776977714180201 24.981121615683875 1.0630082059048673 0.9989207455697234 0.12754237566496807 0.05943201557908791 380.2550210273816 611340.7709922997 0.015570389558629405 0.032591715128940754 1.671176368519876e-05 4.776977714180201 -0.0640874603351439 RS(ph)PSDASTSSFPTSSDGLSPFSETFIPDSSK ddPTM_KYSE-520_SHP099_60min_R1 1 RSPSDASTSSFPTSSDGLSPFSETFIPDSSK 31 1 Q2NL68-2 Q2NL68-2 PROSER3 Proline and serine-rich protein 3 1 RS(0.494)PS(0.494)DAS(0.003)T(0.003)S(0.003)S(0.003)FPTSSDGLSPFSETFIPDSSK 113.21 0.00019979 107570000.0 97293.0 96568.0 90523.0 68310.0 75046.0 76428.0 82716.0 95060.0 103320.0 82208.0 True False 91895.96334121304 91928.72832847692 96358.25742192101 74802.16186184957 80951.69324666935 75950.98450247278 91077.74051036572 94730.25904717088 84559.69248524611 81479.7010768561 1.1278387393018507 1.1282408638412251 1.1826044542189795 0.9180465916448575 0.9935197623063357 0.9321460866778545 1.1177966942276363 1.1626240375847248 1.0378007205191486 1.0 16.31415306707308 -5.23578399231065 24.99379323539923 1.0288286628598802 1.1444293114027513 0.3797282359787264 0.07182595371203589 965.7033921239522 940799.0397093268 0.02171398607863939 0.03759080807030075 5.810533477014031e-06 5.23578399231065 0.11560064854287111 RS(ph)PSLSS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 RSPSLSSK 8 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RS(0.998)PS(0.055)LS(0.011)S(0.935)K 105.36 0.0020222 359270000.0 1186400.0 1103600.0 996100.0 1104600.0 1080200.0 1088600.0 1136900.0 1132800.0 1167400.0 1050500.0 True False 1120588.026970235 1050581.3994626275 1060310.19981635 1209580.8518899013 1165205.594502734 1081805.6436043335 1251828.9470747483 1128870.5811975088 955429.5877591588 1041193.3872766341 1.0762534997473112 1.0090165883693796 1.018360482090381 1.1617254456962167 1.1191058344602713 1.0390054881484847 1.2023020529827382 1.0842083660848105 0.9176293274952497 1.0 19.9898066235074 -7.748237288267076 24.397656289273282 0.9588147016769626 1.0893150036161352 0.42528556074616053 0.06041474488779397 146.53115692652608 270796.07080268377 0.04325356387373738 0.016117343509287205 1.7855117467639053e-08 7.748237288267076 0.1305003019391726 RS(ph)PSLSSK ddPTM_KYSE-520_SHP099_60min_R1 1 RSPSLSSK 8 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RS(0.99)PS(0.008)LS(0.001)SK 75.652 0.017238999999999997 959500000.0 550760.0 538320.0 465710.0 513600.0 556580.0 558290.0 451150.0 522550.0 648230.0 395400.0 True False 520208.2448871601 512458.29916520603 495730.4117623454 562412.3895805293 600379.6794929933 554805.5050228394 496756.64479969366 520737.39601408696 530527.7725485011 391897.0636165451 1.3274104176400823 1.307634955046831 1.2649505642823518 1.4351023311846662 1.5319831027885416 1.4156919164 1.2675691933373332 1.3287606475245417 1.353742657963879 1.0 18.580115237676196 -9.316001790599067 0.6990878657969869 0.9757283026724742 1.3682158418263746 0.6602397597127536 0.07751269568096476 6.6595501293271235 2.775213615940345 0.5336107846697433 0.032201908615861516 4.830568103891918e-10 9.316001790599067 0.39248753915390033 RS(ph)PSPKPT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 5 RSPSPKPTK 9 2 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 RS(0.817)PS(0.435)PKPT(0.748)K;RS(0.752)PS(0.262)PKPT(0.987)K;RS(0.87)PS(0.42)PKPT(0.711)K;RS(0.739)PS(0.353)PKPT(0.908)K;RS(0.958)PS(0.148)PKPT(0.894)K 110.38 0.0025866 15895600000.0 18534000.0 14711200.0 14175400.0 14912500.0 14978100.0 16021000.0 15104100.0 14344500.0 19464000.0 16549400.0 True False 17505882.073387 14004451.870038604 15089168.965441916 16329779.516393367 16156791.256268676 15921006.996311786 16630969.829810608 14294742.277531452 15929828.247510951 16402785.191238368 1.0672505839275306 0.853784994850701 0.9199150503721694 0.9955491903360414 0.9850029167545832 0.9706282689610587 1.013911334929517 0.8714826238879884 0.9711660587995721 1.0 23.9674374693247 -4.21067622456929 22.870498506166836 0.9531503418077311 1.0672523150401718 0.3015243050112365 0.051939153060300246 23766.135453008774 10706563.984856822 0.013099014019612186 11.176073110689844 6.15635670667825e-05 4.21067622456929 0.11410197323244076 RS(ph)PTEDFR ddPTM_KYSE-520_SHP099_60min_R1 4 RSPTEDFR 8 1 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(0.587)PT(0.413)EDFR;RS(1)PTEDFR;RS(1)PTEDFR;RS(0.798)PT(0.202)EDFR 86.344 0.009308499999999999 3338200000.0 5373890.0 4683990.0 4458370.0 3904320.0 4783520.0 4836970.0 4482200.0 4706040.0 5540910.0 4487110.0 True False 5075789.609115869 4458964.089587676 4745763.663844222 4275385.398923386 5159955.809494278 4806780.676047082 4935304.518056497 4689715.845637996 4534820.418974303 4447357.696318754 1.1413045578315617 1.0026097278567292 1.0670973616024793 0.9613315795269366 1.1602295479325553 1.0808171962479736 1.1097161179865598 1.0544948632127906 1.0196662217495895 1.0 22.084517013130327 -7.777748803185624 2.943646359886542 1.0025619598268185 1.0713611477470495 0.1741097480425684 0.05594550976493834 0.4653316229741373 7.605956449101921 0.051457844325933304 0.014485231080311453 1.668211830681959e-08 7.777748803185624 0.06879918792023099 RS(ph)PTGSTTSR ddPTM_KYSE-520_SHP099_60min_R1 5 RSPTGSTTSR 10 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RS(1)PTGSTTSR;RS(0.99)PT(0.005)GS(0.001)T(0.001)T(0.001)S(0.001)R;RS(0.995)PT(0.005)GSTTSR;RS(0.315)PT(0.044)GS(0.027)T(0.112)T(0.186)S(0.315)R;RS(0.797)PT(0.104)GS(0.069)T(0.021)T(0.007)S(0.002)R 83.86200000000001 0.0083365 2590720000.0 692121.0 574485.5 517361.0 574389.0 585007.0 662674.1 627702.5 543885.0 700786.0 689183.0 True False 653727.6684209923 546886.354259684 550710.9178668679 628978.7578636495 631043.7226654892 658538.1051354231 691156.794486047 541998.3898787126 573540.9277774454 683077.3747962599 0.957033115927721 0.80062138556822 0.806220405164389 0.9208016266843178 0.9238246587419314 0.9640754172714971 1.011827971453742 0.7934655865894743 0.8396426948682267 1.0 19.381689481813577 -5.286937498725251 23.08258602617889 0.9189211649940887 0.8492246155226113 0.14522345757452382 0.074249867496446 558.3563122121651 505459.3875034935 0.021954707575392224 0.03258370204397977 5.164906944255747e-06 5.286937498725251 -0.06969654947147741 RS(ph)PTSS(ph)PTPQR ddPTM_KYSE-520_SHP099_60min_R1 2 RSPTSSPTPQR 11 1 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 2 RS(0.516)PT(0.36)S(0.214)S(0.892)PT(0.018)PQR;RS(0.777)PT(0.23)S(0.29)S(0.691)PT(0.013)PQR 119.17 0.00020303 352040000.0 523090.0 486400.0 444780.0 420840.0 446040.0 434660.0 458520.0 413900.0 531920.0 439600.0 True False 494073.1549459375 463032.61389871495 473451.23047316226 460836.5070698398 481140.8103795591 431947.1257110601 504871.67632396263 412464.2775049865 435336.73661200306 435705.4860036251 1.1339612899476479 1.0627192651296167 1.0866313270823107 1.0576789181534556 1.1042798996925092 0.9913740808566873 1.1587452821738446 0.9466584441894192 0.9991536728283955 1.0 18.73299375289622 -7.278317448157745 24.9990628904798 0.9796795392571106 1.080340529141626 0.5224253597290118 0.045007563747686205 653.087643022748 967319.5798998744 0.022717007053636606 0.010958645940951474 5.2684462283219176e-08 7.278317448157745 0.10066098988451533 RS(ph)PTSSPTPQR ddPTM_KYSE-520_SHP099_60min_R1 1 RSPTSSPTPQR 11 1 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 RS(0.988)PT(0.012)SSPTPQR 107.97 0.00034148 1184900000.0 234770.0 187500.0 193840.0 175810.0 174110.0 187150.0 173560.0 202550.0 241370.0 217060.0 True False 221746.84009760784 178492.2185567624 206335.23655496567 192518.92954079603 187811.4664496124 185981.92743023232 191105.1385823672 201847.40132552537 197543.29244254623 215137.01727012475 1.030723782040651 0.8296676268066349 0.9590875581206575 0.8948665923868899 0.8729853599011157 0.8644812956419978 0.8882950084894815 0.9382271999805918 0.918220838743488 1.0 17.714896255995896 -8.337417646912186 1.2035982333929356 0.9995563115989499 0.9033723543578618 0.20146924616252582 0.05332611791450479 1.7595425357708026 4.234693839700201 0.04818092949771792 0.014756954470993908 4.598141725234316e-09 8.337417646912186 -0.09618395724108808 RS(ph)PVPAQIAITVPK ddPTM_KYSE-520_SHP099_60min_R1 8 RSPVPAQIAITVPK 14 1 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK;RS(1)PVPAQIAITVPK 146.2 4.2537000000000005e-06 18577040000.0 14247830.0 12533200.0 12343720.0 11658960.0 11961820.0 11698150.0 11297140.0 11687620.0 14850340.0 11294960.0 True False 13457474.46755504 11931086.25928327 13139415.9418503 12767024.053005842 12903147.180554261 11625137.506641582 12439165.160661457 11647078.37413101 12153892.60260696 11194895.441745905 1.202108098068692 1.0657612946336328 1.1736970666874882 1.1404326301608365 1.1525920226497395 1.0384319860006284 1.1111461670535712 1.040391885278259 1.0856637889876972 1.0 23.416337717959966 -7.076301956004691 0.30999607572525606 0.9933751431035179 1.1714086565266326 0.5403251360536299 0.04239132762570533 1.2444856993623028 0.37638947957583996 0.06641376025509413 0.07957330292928169 8.388765301438262e-08 7.076301956004691 0.1780335134231147 RS(ph)PVSTRPLPSASQK ddPTM_KYSE-520_SHP099_60min_R1 2 RSPVSTRPLPSASQK 15 2 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 RS(0.877)PVS(0.104)T(0.019)RPLPSASQK;RS(0.952)PVS(0.038)T(0.01)RPLPSASQK 94.882 0.0013572 3296700000.0 640980.0 546930.0 528560.0 565820.0 475020.0 423140.0 589340.0 578640.0 639650.0 433980.0 True False 605423.5616380487 520654.6618413326 562631.8233259008 619595.3626800136 512401.37150591466 420499.0263041869 648916.2386041264 576632.8328955912 523505.68426430214 430135.2748313314 1.407518976153381 1.210443998217762 1.3080346027107987 1.4404662880136374 1.1912563360604225 0.9775971674703425 1.5086329268358318 1.3405848500142328 1.2170721977396157 1.0 18.714430924104466 -8.08964975221231 5.079434999491955 1.0000259325936374 1.2925514095768942 0.2870491952243107 0.14162302288367185 0.8099728021279906 43.45634663139178 0.13949640092280396 0.03633561250892056 8.134863083313094e-09 8.08964975221231 0.2925254769832568 RS(ph)QSFNSIDK ddPTM_KYSE-520_SHP099_60min_R1 1 RSQSFNSIDK 10 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;H0YHX7;A0A1B0GTC4;F8VZV4 Q8IVL0-3 NAV3 Neuron navigator 3 1 RS(0.776)QS(0.224)FNSIDK 116.51 0.00037779 644430000.0 486260.0 508690.0 484260.0 504780.0 532950.0 424050.0 376220.0 463490.0 577680.0 478550.0 True False 459286.1884647224 484251.7688407433 515476.1744433948 552754.1394323595 574890.132929302 421403.34665663936 414251.9891533656 461882.2613693793 472787.8741277297 474310.4193062663 0.9683240548172681 1.0209595849676196 1.0867907460210091 1.1653847710974305 1.2120546155619882 0.8884547534776706 0.8733773754311721 0.9737974174063799 0.9967899815889275 1.0 18.855472035277558 -6.278863824553995 24.895534553034867 0.9402770828300971 1.0907598089588388 0.4841140559695942 0.07430002897744134 745.2206027368527 1064745.647587641 0.028974971197249524 0.025615958537000206 5.26182227885977e-07 6.278863824553995 0.1504827261287417 RS(ph)RQHQR ddPTM_KYSE-520_SHP099_60min_R1 1 RSRQHQR 7 2 H0YMJ6;Q8WTP8;Q8WTP8-2 H0YMJ6 AEN Apoptosis-enhancing nuclease 1 RS(1)RQHQR 58.167 0.037114999999999995 908250000.0 145330.0 156990.0 138740.0 128570.0 138970.0 128560.0 101390.0 127970.0 150510.0 115420.0 True False 137268.25519182748 149447.96475320568 147683.4023918488 140789.25414401988 149906.14836886237 127757.60935308934 111639.49067104285 127526.10193842268 123181.17804833908 114397.46859540127 1.1999238871037887 1.3063922356688706 1.2909673981875645 1.2307025310320507 1.3103974258298277 1.1167870314066124 0.9758912678906141 1.114763320414497 1.0767823760506787 1.0 16.803695602730848 -6.413659027791386 4.274827879911091 1.0505646819946683 1.2683150240418262 0.8312295363398546 0.04827387915742938 0.09108017890906416 2.7941081853368397 0.01729560320139537 0.014960190542993952 3.8578112231712453e-07 6.413659027791386 0.21775034204715782 RS(ph)RS(ph)HS(ph)DNDRFK ddPTM_KYSE-520_SHP099_60min_R1 2 RSRSHSDNDRFK 12 3 O75494;O75494-2 O75494 SRSF10 Serine/arginine-rich splicing factor 10 3 RS(1)RS(1)HS(1)DNDRFK;RS(1)RS(1)HS(1)DNDRFK 58.83 0.024621 49967000.0 52401.0 49851.0 50741.0 60246.0 32638.0 35883.0 40368.0 49403.0 67782.0 22714.6 True False 49494.2120711963 47456.083132123465 54011.846048470536 65971.76172637957 35206.42491518259 35659.04088687697 44448.791393713924 49231.6325237469 55474.497445169945 22513.36631569138 2.1984367587311806 2.107907030280385 2.3991012845922257 2.9303375071189834 1.5638010069886528 1.583905329254262 1.974328972861512 2.186773485288755 2.4640694184638794 1.0 14.458494171741178 -5.779459207409693 24.986425185762727 1.8531821612799217 2.3867399639206393 0.32963769874171944 0.42334057198900027 338.1685505499111 468904.9141343557 0.13500719081146662 0.15338332664424056 1.6616547470258033e-06 5.779459207409693 0.5335578026407175 RS(ph)RS(ph)PLLNDRR ddPTM_KYSE-520_SHP099_60min_R1 1 RSRSPLLNDRR 11 3 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 RS(1)RS(1)PLLNDRR 87.647 0.007356399999999999 731090000.0 137950.0 112940.0 95188.0 110250.0 102660.0 91192.0 106220.0 90496.0 114980.0 103390.0 True False 130297.63850349272 107514.19287360374 101323.97078618487 120728.12685212887 110738.75794450166 90622.83690204518 116957.75420730034 90182.09049792509 94102.53040992648 102474.04503620276 1.2715184460363622 1.0491846285136919 0.9887769215159645 1.1781337099504288 1.080651768019688 0.8843491722223837 1.1413402697822719 0.8800481181948553 0.9183060000869612 1.0 16.64489901988202 -1.0000000000000002 0.30587492687466744 0.9554319485653318 3.207791976944902 0.39245089972119385 0.09657926737861015 61.340367583877345 0.875897818355838 0.09784136385606391 76.10381228242507 0.09999999999999995 1.0000000000000002 2.25236002837957 RS(ph)S(ph)DGSLSHEEDLAK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSDGSLSHEEDLAK 15 1 A0A2R8Y7R9;Q13136-2;Q13136;E9PJZ7;H0YEF9 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 2 RS(0.913)S(0.898)DGS(0.162)LS(0.027)HEEDLAK 93.494 0.0022075 947410000.0 3087000.0 3107500.0 2853000.0 3270200.0 3135700.0 3171300.0 3114700.0 2992400.0 3651700.0 2754500.0 True False 2915757.9562180634 2958211.0355474064 3036908.944961403 3580998.8247785154 3382461.75030756 3151506.7403659923 3429564.2725426275 2982020.062831409 2988643.3318657908 2730097.2729685726 1.0680051531818178 1.0835551776258852 1.1123812235668873 1.3116744448027358 1.238952832852596 1.1543569423587607 1.25620588925518 1.0922761223042092 1.09470214173581 1.0 21.38052092439944 -7.852982360130696 1.6953947579597575 1.0070780235746912 1.174895902114032 0.33250847813127427 0.0757746714667903 0.4278280305044904 2.6016577420555036 0.07829588766026736 0.022982151676190242 1.402870684224356e-08 7.852982360130696 0.16781787853934071 RS(ph)S(ph)KSFSLDEPPLFIPDNIATIR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSKSFSLDEPPLFIPDNIATIR 23 2 Q92576-2;Q92576;E7EVH3;D6R9X2;E9PE34;A0A1B0GX99 Q92576-2 PHF3 PHD finger protein 3 2 RS(0.5)S(0.5)KS(0.5)FS(0.5)LDEPPLFIPDNIATIR 57.293 0.033644 44333000.0 33744.0 31311.0 36678.0 44446.0 40876.0 56783.0 67439.0 70380.0 85725.0 65579.0 True False 31872.15305300372 29806.772561230835 39042.32256687493 48670.1344768228 44092.70864737435 56428.59623441561 74256.39226121361 70135.86820681558 70159.50095139118 64998.02107969003 0.49035574504533386 0.45857969313691266 0.6006694037501168 0.7487940966256708 0.6783700167319713 0.8681586807886353 1.1424408163161224 1.0790462085118924 1.0794098002671955 1.0 15.988108174275492 -6.044217801959351 0.82644523448597 1.1009567236310038 0.4853950400406977 0.9063992221314235 0.0740176786064226 0.18024761098009384 0.2720151659328084 0.047263405633328176 0.05662694041376321 9.031964003127137e-07 6.044217801959351 -0.6155616835903062 down RS(ph)S(ph)SPAELDLKDDLQQTQGK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSSPAELDLKDDLQQTQGK 20 2 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 2 RS(0.64)S(0.72)S(0.64)PAELDLKDDLQQTQGK 189.39 3.5767e-13 783020000.0 212500.0 232460.0 153720.0 179210.0 180470.0 178990.0 163250.0 182500.0 239140.0 189830.0 True False 200712.20139175223 221292.2726704266 163629.0371606961 196242.06451854866 194671.96226616213 177872.85701703062 179752.90316646366 181866.95009582018 195718.2042288208 188148.25388550528 1.066776848824186 1.176159055959619 0.8696814016688671 1.043018260684836 1.0346732337182716 0.9453867008793629 0.9553790665304261 0.9666151364152042 1.040233965434099 1.0 17.521510374937947 -4.745957183395132 24.999981889740592 0.9825012610959402 1.1214679653100856 0.5006086646701118 0.055766992468737425 189.10343067151996 305351.1369961127 0.013749845450104914 0.03609285556938116 1.7949105763261813e-05 4.745957183395132 0.13896670421414548 RS(ph)S(ph)VKRSDSGDEQLPT(ph)ICR ddPTM_KYSE-520_SHP099_60min_R1 2 RSSVKRSDSGDEQLPTICR 19 3 Q01668-3 Q01668-3 3 RS(0.5)S(0.5)VKRS(0.5)DS(0.5)GDEQLPT(1)ICR;RS(0.501)S(0.501)VKRS(0.501)DS(0.501)GDEQLPT(0.998)ICR 64.507 0.017404 1994940000.0 552140.0 428580.0 241250.0 610410.0 349190.0 314340.0 464130.0 509730.0 296190.0 265940.0 True False 521511.6935361977 407990.37348830455 256801.361013648 668423.1828735408 376669.2663806796 312378.0874614974 511048.78987228684 507961.8656018761 242409.36234228665 263583.97849818924 1.97854094360208 1.5478572552584313 0.9742677171685994 2.535902169327536 1.4290294445315357 1.1851178863044718 1.9388461801967893 1.9271348300305198 0.9196665280016325 1.0 18.00790315569449 -7.772268718160232 24.983008685647526 0.9598326006828253 1.6720369969988196 0.3233195280008936 0.42168024390523634 287.41461839500676 663035.8249184112 0.3891552418611059 0.1045105382101521 1.6893953008752514e-08 7.772268718160232 0.7122043963159943 RS(ph)SAIGIENIQEVQEK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSAIGIENIQEVQEK 16 1 J3KPC5;P47736-3;F2Z357;P47736;P47736-4;A0A0A0MQY8;X6R8W7;P47736-2 J3KPC5 RAP1GAP Rap1 GTPase-activating protein 1 1 RS(0.666)S(0.334)AIGIENIQEVQEK 231.29 2.7161999999999997e-19 896700000.0 522920.0 413730.0 323450.0 345620.0 369060.0 388780.0 350090.0 402000.0 493650.0 395050.0 True False 493912.58518482425 393853.7897786091 344300.1045382977 378467.62088555784 398102.9223358443 386353.47980938177 385480.51374914043 400605.5558275057 404015.6039038114 391550.16434424906 1.261428624380754 1.0058833468713213 0.8793256545171327 0.9665878228384828 1.01673542393366 0.9867279214565764 0.9844984087664123 1.0231270276655924 1.0318361239368625 1.0 18.578837627967015 -4.2677293242077345 5.054597698281274 0.9846861416733097 1.2734964667996855 0.8037603408668845 0.04056797630436879 0.06941229545771851 5.696450871891055 0.010935870750213694 0.06965169656137694 5.39846979499593e-05 4.2677293242077345 0.28881032512637583 RS(ph)SDEDAAGEPK ddPTM_KYSE-520_SHP099_60min_R1 3 RSSDEDAAGEPK 12 1 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 RS(0.799)S(0.201)DEDAAGEPK;RS(0.616)S(0.384)DEDAAGEPK;RS(0.948)S(0.052)DEDAAGEPK 154.19 1.1375e-05 0.0 1458400.0 1654830.0 1367370.0 1354770.0 1465730.0 1336530.0 1366970.0 1477810.0 1955920.0 1253670.0 True False 1377499.644751676 1575329.482849531 1455512.8580693554 1483526.933473547 1581074.6121371 1328188.220509369 1505156.667941566 1472683.8220334465 1600774.232730767 1242563.4591405017 1.108595005445043 1.2678060595305194 1.1713790932465966 1.1939244813296885 1.2724296698944866 1.0689097693473901 1.2113318292674595 1.1851980767663346 1.2882836855978725 1.0 20.244888103083102 -6.226799915480274 24.99789896060786 1.1661061160350523 1.204195115876132 0.07079396927987192 0.08567361001112822 2301.904625332264 1661192.7749096917 0.027041786857704135 0.02704015306333963 5.931985551096233e-07 6.226799915480274 0.03808899984107961 RS(ph)SDPALIGLSTSVSDSNFSSEEPSR ddPTM_KYSE-520_SHP099_60min_R1 7 RSSDPALIGLSTSVSDSNFSSEEPSR 26 1 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.587)S(0.413)DPALIGLSTSVSDSNFSSEEPSR;RS(0.619)S(0.381)DPALIGLSTSVSDSNFSSEEPSR;RS(0.622)S(0.378)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR;RS(0.5)S(0.5)DPALIGLSTSVSDSNFSSEEPSR 272.87 1.3026999999999999e-38 16709770000.0 1790740.0 1849200.0 1756930.0 1440950.0 1425690.0 1497480.0 1547560.0 1681240.0 1988540.0 1626250.0 True False 1691404.0824483105 1760361.656294213 1870184.5189873918 1577897.4547625864 1537883.691933535 1488133.6718579978 1704002.4675301206 1675408.1708443675 1627471.2630140479 1611842.6902033566 1.0493605193165074 1.092142345523879 1.1602773213255952 0.9789401064712541 0.9541152503781305 0.9232499430017261 1.0571766574287327 1.0394365287799836 1.0096960906332115 1.0 20.62027951843951 -5.277444914293505 24.868742014220363 0.9942425831481884 1.0997482921429338 0.5481926033370403 0.044068149896614985 604.2975552514472 938931.1827538047 0.01363327863444406 0.020293848002037443 5.279041616491856e-06 5.277444914293505 0.10550570899474543 RS(ph)SDPLGDTASNLGSAVDELMR ddPTM_KYSE-520_SHP099_60min_R1 5 RSSDPLGDTASNLGSAVDELMR 22 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 RS(0.5)S(0.5)DPLGDTASNLGSAVDELMR;RS(0.5)S(0.5)DPLGDTASNLGSAVDELMR;RS(0.499)S(0.499)DPLGDT(0.003)ASNLGSAVDELMR;RS(0.5)S(0.5)DPLGDTASNLGSAVDELMR;RS(0.5)S(0.5)DPLGDTASNLGSAVDELMR 198.18 4.4171e-14 869965000.0 341658.0 354448.0 352958.0 300484.0 322886.0 324149.0 270512.0 281148.0 387703.0 302584.0 True False 322705.5496616626 337419.78604270524 375710.237432767 329041.90901619126 348295.2912299669 322125.8658540338 297857.99290270405 280172.7632084362 317305.9083972843 299903.3411667898 1.0760318588187767 1.1250951214146387 1.2527710960839797 1.097159864028311 1.1613584892882676 1.0740989566864645 0.9931799750675393 0.9342102095908943 1.058027253590403 1.0 18.19413806952745 -6.558867430554733 2.7979975588108514 0.9903147851642555 1.1449609012723432 0.6325464563581922 0.05230175273016323 0.17090871916720893 2.7233591221186013 0.02185643123648003 0.016842476997932263 2.7614206579419944e-07 6.558867430554733 0.15464611610808765 RS(ph)SDSWEVWGSASTNR ddPTM_KYSE-520_SHP099_60min_R1 12 RSSDSWEVWGSASTNR 16 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 RS(0.5)S(0.5)DSWEVWGSASTNR;RS(0.496)S(0.496)DS(0.007)WEVWGSASTNR;RS(0.499)S(0.499)DS(0.001)WEVWGSASTNR;RS(0.5)S(0.5)DS(0.001)WEVWGSASTNR;RS(0.491)S(0.491)DS(0.018)WEVWGSASTNR;RS(0.498)S(0.498)DS(0.005)WEVWGSASTNR;RS(0.395)S(0.395)DS(0.209)WEVWGSASTNR;RS(0.499)S(0.499)DS(0.003)WEVWGSASTNR;RS(0.499)S(0.499)DS(0.003)WEVWGSASTNR;RS(0.466)S(0.466)DS(0.069)WEVWGSASTNR;RS(0.497)S(0.497)DS(0.005)WEVWGSASTNR;RS(0.404)S(0.404)DS(0.192)WEVWGSASTNR 241.13 2.6825e-23 21536050000.0 4620098.0 4789478.0 4953425.0 4405646.0 4113625.0 3937433.0 4143061.0 4647600.0 5528281.0 4424802.0 True False 4363811.95400297 4559384.287726953 5272730.701260221 4824357.271234227 4437343.8841754375 3912858.020130387 4561882.038258811 4631478.560357991 4524484.5270231245 4385601.696723869 0.9950315272047673 1.0396257122786372 1.202282164656917 1.1000445559928795 1.0117981957846789 0.8922055149361533 1.0401952465648276 1.0560645677918714 1.031667907827335 1.0 22.064343360757796 -5.788115974552202 7.813796327069174 1.0039899562869823 1.0895165967217582 0.26292685399010207 0.06449415687348121 0.27870175422822646 64.48665680896663 0.021607839484957887 0.0250027832299488 1.6288610014379335e-06 5.788115974552202 0.08552664043477587 RS(ph)SDSYPLAPVR ddPTM_KYSE-520_SHP099_60min_R1 3 RSSDSYPLAPVR 12 1 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 RS(0.499)S(0.499)DS(0.001)YPLAPVR;RS(0.647)S(0.346)DS(0.007)YPLAPVR;RS(0.799)S(0.195)DS(0.007)YPLAPVR 135.58 0.00018339 3596250000.0 3811810.0 3513780.0 3510410.0 2662300.0 2729700.0 3314250.0 3110610.0 2820690.0 3271490.0 3350160.0 True False 3600361.300645151 3344972.7345086928 3736696.6454545925 2915324.1915503144 2944511.8601315646 3293564.5363913863 3425060.8154280777 2810905.6847439967 2677469.8835516674 3320480.1887850403 1.0842893485121257 1.0073762059494817 1.1253482728417799 0.8779827090662534 0.8867729041349763 0.9918940481908123 1.03149563337142 0.8465358999092549 0.8063502057909734 1.0 21.662960460259185 -5.265628674366085 24.994517651748847 0.9199913602537958 1.065841770333787 0.4803507366592098 0.07244470917297112 336.195166067819 2005838.2618205743 0.021426474173566176 0.0330966582655797 5.424645041387704e-06 5.265628674366085 0.14585041007999122 RS(ph)SGFISELPSEEGK ddPTM_KYSE-520_SHP099_60min_R1 6 RSSGFISELPSEEGK 15 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(0.5)S(0.5)GFISELPSEEGK;RS(0.5)S(0.5)GFISELPSEEGK;RS(0.5)S(0.5)GFIS(0.001)ELPSEEGK;RS(0.498)S(0.498)GFIS(0.004)ELPSEEGK;RS(0.499)S(0.499)GFIS(0.002)ELPSEEGK;RS(0.5)S(0.5)GFISELPSEEGK 192.94 2.5669e-11 19499800000.0 10076800.0 9671100.0 8814160.0 9132600.0 9179300.0 9170010.0 8548420.0 9633000.0 11291200.0 9100900.0 True False 9517819.816397209 9206485.839382952 9382334.856754629 10000559.558183685 9901658.686927374 9112776.566147512 9412577.71813943 9599585.371359104 9241002.70798888 9020273.10639306 1.0551587190471556 1.0206438021103723 1.0401386683186966 1.1086759170402338 1.0977116291423192 1.0102550619768809 1.043491433919925 1.0642233619906099 1.0244703900860141 1.0 23.10473968387735 -9.360742394829458 7.951262824662507 0.9999999999999951 1.0523366713352138 0.20730158299227308 0.03026733174507146 0.0 0.0 0.031215725192785 0.007570925420594517 4.3577027759114593e-10 9.360742394829458 0.05233667133521869 RS(ph)SGFISELPSEEGKK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSGFISELPSEEGKK 16 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(0.5)S(0.5)GFIS(0.001)ELPSEEGKK 63.869 0.017677000000000002 1046900000.0 313570.0 261340.0 267460.0 251700.0 263750.0 263290.0 230830.0 281030.0 378840.0 288300.0 True False 296175.64701370255 248784.83412066253 284700.89955113066 275621.4923236358 284505.62446778064 261646.70944753324 254164.54908370457 280055.1725228948 310052.205779236 285745.8862940059 1.036500125530995 0.8706506236967699 0.9963429508769899 0.9645685398950834 0.9956595636692765 0.915662208968157 0.8894775437718565 0.980084704473205 1.0850627100899752 1.0 18.124373203441895 -7.568112811552576 7.409190036411244 1.0404206508481535 0.9506921208744761 0.32011702202084447 0.05164894265058585 0.25166098389329694 33.49509673109009 0.033874074084276645 0.01269956052821354 2.7032560799692355e-08 7.568112811552576 -0.08972852997367742 RS(ph)SGREEDDEELLR ddPTM_KYSE-520_SHP099_60min_R1 3 RSSGREEDDEELLR 14 2 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;A0A494C1P1;A0A494C1G0;J3QSX6;O14639-4;O14639-3;O14639-5 F8W8M4;J3QSX6 ABLIM1 Actin-binding LIM protein 1 1 RS(0.698)S(0.302)GREEDDEELLR;RS(0.917)S(0.083)GREEDDEELLR;RS(0.597)S(0.403)GREEDDEELLR 137.43 4.258999999999999e-06 2443000000.0 2282100.0 2215740.0 2161200.0 1916550.0 2045400.0 1987090.0 1843400.0 2024540.0 2630690.0 1978260.0 True False 2155507.363746436 2109292.5245064525 2300514.410042265 2098698.3357682335 2206361.3432659656 1974687.8342363879 2029748.8618502861 2017517.343271186 2153023.0102982232 1960734.1554629903 1.0993368773327936 1.075766706378603 1.173292362777779 1.0703635319050508 1.1252730703540863 1.0071165582210724 1.035198400657737 1.0289601666039154 1.0980698246620932 1.0 20.902962511486315 -6.255720188819311 24.865012289424854 1.0357620880670162 1.1084177932557717 0.5166292389463603 0.036218540436908433 365.01801896153677 1586969.5527371392 0.011779290563018584 0.011480305525080217 5.549831673731822e-07 6.255720188819311 0.07265570518875553 RS(ph)SGREEDDEELLRR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSGREEDDEELLRR 15 3 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;A0A494C1P1;A0A494C1G0;J3QSX6;O14639-4;O14639-3;O14639-5 F8W8M4;J3QSX6 ABLIM1 Actin-binding LIM protein 1 1 RS(0.5)S(0.5)GREEDDEELLRR 185.85 7.5143e-11 152590000.0 84598.0 82114.0 91397.0 66331.0 68382.0 76057.0 74527.0 77823.0 99879.0 71371.0 True False 79905.18029806807 78169.12018437311 97288.59686037054 72635.07829685757 73763.27435964267 75582.30005108836 82060.91647342742 77553.05017702478 81743.49134469515 70738.70846579778 1.1295821203281124 1.1050402513663073 1.3753233409316434 1.0268080923752896 1.0427568718660911 1.0684715863540604 1.1600567532711448 1.0963311581313608 1.1555694628524098 1.0 16.110212258370606 -13.99999999915557 0.09347466610761518 0.6287617021784654 1.2185922899708697 0.15228435732459977 0.0922928660361499 424.03579791059343 2.729713003458492 31.886819017801667 2.0213841995851927 1.0000000019443727e-14 13.99999999915557 0.5898305877924043 RS(ph)SIGLR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSIGLR 7 1 Q96GN5-2;Q96GN5;C9J8L0;C9IZR6;Q96GN5-5;Q96GN5-4 Q96GN5-2 CDCA7L Cell division cycle-associated 7-like protein 1 RS(0.642)S(0.358)IGLR 57.785 0.053359000000000004 702820000.0 1164900.0 1058000.0 1099800.0 1039900.0 1137800.0 1247500.0 1167700.0 1253800.0 1540300.0 1292700.0 True False 1100280.6748294218 1007172.0919096238 1170694.867742217 1138731.7833426653 1227338.3868035641 1239713.8897633716 1285742.5116537807 1249450.86043912 1260620.3478031824 1281247.6837053811 0.8587572011427167 0.7860869562681839 0.913714719355867 0.8887678766758365 0.9579243751325968 0.9675833217337858 1.0035081647409505 0.9751829223415224 0.9839005867760524 1.0 20.289117965778527 -5.429011809663105 0.8984601939567897 0.9903412885722089 0.8178240382165017 0.8344358223106536 0.02731625495599614 0.24285954809426055 0.3846405414899879 0.011479345662216868 0.02891978664897647 3.7238158003610804e-06 5.429011809663105 -0.1725172503557072 RS(ph)SITEPEGPNGPNIQK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSITEPEGPNGPNIQK 17 1 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 RS(0.491)S(0.491)IT(0.019)EPEGPNGPNIQK 156.67 8.504299999999999e-07 427150000.0 157530.0 144800.0 180590.0 140750.0 162240.0 137290.0 149550.0 177350.0 229540.0 165400.0 True False 148791.4968717306 137843.59065076898 192231.12035421605 154126.83768196942 175007.36498067348 136433.1221848604 164667.97346734823 176734.81424380117 187861.32223251436 163934.68467925276 0.9076267000046351 0.8408445773416867 1.1726079854932885 0.9401722276376537 1.067543243353809 0.8322407332639784 1.0044730545554175 1.0780806672461813 1.145952258974819 1.0 17.322761601118263 -7.1724919320673575 4.157699628026485 1.0843187206829985 0.9653144087200923 0.19933282283856346 0.1009773612322565 0.36555532379633193 11.367113180663111 0.051067023255628514 0.027886692870490323 6.722147967980394e-08 7.1724919320673575 -0.11900431196290617 RS(ph)SLCLK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSLCLK 7 1 Q4LE39-2;Q4LE39;Q4LE39-3;X6RCR8 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 RS(0.593)S(0.407)LCLK 51.927 0.046870999999999996 326270000.0 118700.0 121070.0 104730.0 82524.0 109730.0 116670.0 83564.0 89772.0 130780.0 121600.0 True False 112115.47437741654 115253.61547022518 111481.0633739248 90367.05614825462 118365.12672170445 115941.81925346084 92011.4646260481 89460.60188494223 107033.64869551397 120522.71860336832 0.9302434899961108 0.9562812456091089 0.9249796608123405 0.7497927129045783 0.9820980483458529 0.9619914037536533 0.7634366839072994 0.7422716888701348 0.8880786123631519 1.0 16.878945595390572 -6.754842851872299 24.999750498649274 0.8269693851913151 0.9149686950832246 0.10584915040759113 0.08995827508989927 277.9849218185912 1053520.3633385182 0.03502473654825208 0.02648095886354058 1.75855982833171e-07 6.754842851872299 0.08799930989190952 RS(ph)SLDAEIDSLTSILADLECSSPYKPRPPQSSTGSTASPPVSTPVTGHK ddPTM_KYSE-520_SHP099_60min_R1 3 RSSLDAEIDSLTSILADLECSSPYKPRPPQSSTGSTASPPVSTPVTGHK 49 3 A0A087WZF1;Q93052;C9JUT4 A0A087WZF1 LPP Lipoma-preferred partner 1 RS(0.5)S(0.5)LDAEIDSLTSILADLECSSPYKPRPPQSSTGSTASPPVSTPVTGHK;RS(0.5)S(0.5)LDAEIDSLTSILADLECSSPYKPRPPQSSTGSTASPPVSTPVTGHK;RS(0.481)S(0.481)LDAEIDS(0.011)LT(0.014)S(0.014)ILADLECSSPYKPRPPQSSTGSTASPPVSTPVTGHK 150.74 2.0428e-09 1040790000.0 217022.0 257915.0 253321.0 488010.0 233575.0 193408.0 231386.0 222305.0 289157.0 132713.0 True False 204983.35703736864 245524.37626169214 269650.4769879309 534390.3236744435 251956.02364004496 192200.86893094503 254776.7549897415 221533.87584137722 236653.37785478434 131537.26606915178 1.5583671697236339 1.8665765497407787 2.0499930175390007 4.06265341864034 1.9154725589901391 1.4611894763716708 1.9369169103438735 1.6841909708303684 1.7991355980469512 1.0 17.005112064498192 -5.989518104274712 24.998428617013047 1.6467813469602597 2.406716444444912 0.24283259727273043 0.6665123299489804 349.8669843964891 834397.1755703907 0.21698691545177523 0.24580586539965885 1.0244290744213226e-06 5.989518104274712 0.7599350974846522 RS(ph)SLLNAK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSLLNAK 8 1 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 RS(0.678)S(0.322)LLNAK 86.463 0.0053085 524730000.0 1135500.0 1125600.0 1069200.0 980760.0 1149500.0 1119100.0 1010300.0 1100100.0 1250400.0 1139200.0 True False 1072511.551436868 1071524.4864399547 1138122.3427804857 1073971.1355237532 1239959.1102396718 1112115.2817909324 1112430.9835778147 1096284.0098652698 1023358.8800188908 1129107.5742841896 0.9498754377914777 0.9490012385394365 1.0079839766392598 0.9511681260349434 1.0981762397845554 0.9849506877110185 0.985230290641751 0.9709296393306646 0.9063431185178796 1.0 20.106751512913387 -10.219594661513474 13.435795770885964 1.00000110157075 0.9811298959834773 0.014963484416853023 0.048016983137232454 0.0 0.0 0.047395648903132775 0.011495133330723899 6.031222333434375e-11 10.219594661513474 -0.01887120558727262 RS(ph)SLLSLMTGK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSLLSLMTGK 11 1 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 RS(0.902)S(0.098)LLSLMTGK;RS(0.912)S(0.088)LLSLMTGK 136.81 0.00027335 303180000.0 1148860.0 1284830.0 892860.0 980370.0 923880.0 1092730.0 1100190.0 987130.0 1189470.0 1001480.0 True False 1085130.4456043686 1223104.8382308532 950415.1842265098 1073544.0700410109 996584.0998418694 1085909.8667423867 1211407.9420196738 983705.8764278746 973492.2320985853 992607.6663396508 1.093211832229652 1.2322137735860796 0.9574932941342974 1.0815391684408624 1.0040060475423107 1.0939970580187015 1.2204297660594068 0.9910319150116959 0.9807422057180399 1.0 19.92086407167459 -1.0000000035619583 0.08196397238360095 0.9306084074348604 1.4423353359206657 0.12914863929840714 0.08659145392342081 429.8675206444763 2.567503973448597 2.351476996243491 24.867284391511994 0.0999999991798288 1.0000000035619583 0.5117269284858053 RS(ph)SLPNGEGLQLK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSLPNGEGLQLK 13 1 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 RS(0.755)S(0.245)LPNGEGLQLK 80.37100000000001 0.0081978 511240000.0 886870.0 780970.0 705320.0 709770.0 825600.0 772890.0 671480.0 818850.0 1008800.0 750500.0 True False 837673.5531684866 743451.0289401315 750786.0557519019 777226.3273998682 890570.0229785752 768066.1068210106 739359.7514132746 816009.6004710268 825627.3497785168 743851.1538801641 1.1261306093281094 0.9994620900459111 1.0093229698382038 1.0448680805905974 1.1972422417214503 1.0325534924756568 0.9939619607451557 1.097006566723008 1.1099362358608735 1.0 19.504654438455038 -5.5492769557681925 24.999018603552607 1.075351508593399 1.0381998384700575 0.03586037526556951 0.06381416881556345 665.3344513067647 630065.1589201406 0.019232365941871638 0.024829753514196144 2.823079083064911e-06 5.5492769557681925 -0.03715167012334142 RS(ph)SLPSFETLDYGDEEDIETQLSSSGK ddPTM_KYSE-520_SHP099_60min_R1 4 RSSLPSFETLDYGDEEDIETQLSSSGK 27 1 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2;K7EPU8 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 RS(0.5)S(0.5)LPSFETLDYGDEEDIETQLSSSGK;RS(0.692)S(0.298)LPS(0.004)FET(0.006)LDYGDEEDIETQLSSSGK;RS(0.612)S(0.388)LPS(0.001)FETLDYGDEEDIETQLSSSGK;RS(0.5)S(0.5)LPSFETLDYGDEEDIETQLSSSGK 251.57 1.3855e-31 961060000.0 659420.0 697141.0 662252.0 541569.0 535338.0 591853.0 573859.0 622517.0 854428.0 661075.0 True False 622840.6580788207 663649.2999300259 704941.823560664 593039.5549313431 577466.054943441 588159.0258902768 631870.2680441259 620357.6338235594 699285.4135770795 655218.3898085678 0.9505848244900349 1.0128673282871705 1.0758883366607332 0.9051021219117625 0.8813337109053923 0.8976534160802729 0.964365893681245 0.9467952112955903 1.0672554745928096 1.0 19.321616323652155 -10.140425782897932 13.136230550477652 0.9999999999435613 0.9643983816231224 0.02238608369211481 0.06382021139374218 0.0 0.0 0.06643751594421088 0.016113464575445192 7.237260701245101e-11 10.140425782897932 -0.035601618320438844 RS(ph)SLVITTK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSLVITTK 9 1 A0A590UJJ4;A0A590UJY1;Q13303-2;Q13303-5;Q13303;Q5TG84;A0A5F9UN28;Q5TG78;A0A590UJB8;C9JQ60;A0A087X1P8;F8W6W4;B7Z8E5;A0A590UJB6;C9JBV8;Q5TG81;Q13303-3;Q14722-3;Q14722-2;Q13303-4;Q14722 A0A590UJJ4 KCNAB2;KCNAB1 Voltage-gated potassium channel subunit beta-2;Voltage-gated potassium channel subunit beta-1 1 RS(0.5)S(0.5)LVITTK 79.283 0.012654 738300000.0 1080500.0 958390.0 896910.0 889390.0 882650.0 998910.0 929940.0 911910.0 1092400.0 1051500.0 True False 1020562.5110766513 912347.5058272816 954726.2537067404 973917.3581951449 952109.5334084796 992675.4321631498 1023947.4105397922 908746.7970513942 894047.6971630171 1042184.5280546199 0.9792531779201049 0.8754183940250035 0.9160817763135168 0.9344960820067968 0.9135709730653193 0.9524948849664027 0.9825010667267631 0.8719634312243097 0.8578593071534841 1.0 19.99117931156613 -4.219340822950757 22.3414687845445 0.9213833165304722 0.9792539004317955 0.1266376999129175 0.044424515156280577 14580.678376383863 7737231.145368493 0.011105614559136124 3.389700499651603 6.034748522161379e-05 4.219340822950757 0.05787058390132327 RS(ph)SMGSTAVATDVK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSMGSTAVATDVK 14 1 Q6UXY1;B0QYF0;Q6UXY1-2 Q6UXY1 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 RS(0.354)S(0.354)MGS(0.259)T(0.033)AVATDVK 121.47 6.192e-05 640370000.0 934560.0 773530.0 702550.0 704990.0 660680.0 813800.0 668960.0 783010.0 836180.0 814700.0 True False 882718.0938008277 736368.4577077996 747837.4971197448 771992.0376370281 712671.757245016 808720.7723362179 736585.0052204434 780293.9210659082 684350.7903824339 807482.3918270095 1.0931731796697015 0.9119312881135309 0.9261347426136287 0.9560481385734234 0.8825848891051669 1.0015336315958623 0.9121994642556184 0.9663293329535215 0.8475117195237186 1.0 19.623071274799628 -4.256795853216461 24.81626953039227 0.9330515555641616 1.093173251635206 0.5140769867852663 0.046476671157076106 326.73926397564423 1746118.1063747592 0.010560560759333197 0.08238497524062471 5.5361028106736774e-05 4.256795853216461 0.16012169607104432 RS(ph)SMGSTAVATDVKK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSMGSTAVATDVKK 15 2 Q6UXY1;Q6UXY1-2 Q6UXY1 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 RS(0.493)S(0.493)MGS(0.011)T(0.003)AVATDVKK;RS(0.5)S(0.5)MGSTAVATDVKK 182.15 1.5958e-09 2182560000.0 1054340.0 1002080.0 1041360.0 745960.0 850380.0 906100.0 810960.0 786990.0 1115280.0 933760.0 True False 995853.6584253178 953938.5726472548 1108487.731834911 816855.8141189486 917300.0679996621 900444.6937992702 892939.7510068939 784260.1153748472 912773.2659208811 925487.6128542869 1.0760313207802055 1.0307415889719178 1.1977337313205472 0.8826220932333086 0.9911532637056334 0.972940838205514 0.9648316612828426 0.8474020661995881 0.986262002044313 1.0 19.819854154977516 -5.270960563899574 24.99999569434767 0.9463318166299108 1.0944261541595086 0.5705672196114451 0.06037096013488891 467.01356925842566 1226247.102943772 0.016621266286898192 0.025043341692450375 5.358453127255205e-06 5.270960563899574 0.14809433752959777 RS(ph)SMSMEETEHTC ddPTM_KYSE-520_SHP099_60min_R1 1 RSSMSMEETEHTC 13 1 O75030-12;O75030-11;O75030-10;O75030-9;O75030-4;O75030-3;O75030-8;O75030-7;O75030-6;O75030-2;O75030-5;O75030 O75030-12 MITF Microphthalmia-associated transcription factor 1 RS(0.5)S(0.5)MS(0.001)MEETEHTC 240.24 4.8348e-16 170950000.0 90852.0 89180.0 112200.0 101320.0 95600.0 102630.0 73512.0 92081.0 124550.0 96095.0 True False 85812.25845102809 84895.65893809088 119432.59152634729 110949.42233703118 103123.17611040693 101989.44810133442 80943.31036798215 91761.59250286699 101934.8596499942 95243.67306077873 0.9009759461530626 0.8913522149016201 1.2539687696644444 1.164900709638004 1.0827299367654581 1.0708264898210187 0.849854985289459 0.9634402953392013 1.0702533446494191 1.0 16.539335638591016 -6.635469996701216 18.97295590895063 0.9667185920720555 1.067662119759556 0.12881932569762022 0.11347781616602642 3.8795612501479217 634.9205809195329 0.04727271679738345 0.036617011587421346 2.3148881048797027e-07 6.635469996701216 0.10094352768750048 RS(ph)SPAAFINPPIGTVTPALK ddPTM_KYSE-520_SHP099_60min_R1 3 RSSPAAFINPPIGTVTPALK 20 1 F6VRR5;Q9BY77-2;Q9BY77;Q6R954;F8WEE2;Q8WUT1;F8WCX5 F6VRR5 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 1 RS(0.654)S(0.346)PAAFINPPIGTVTPALK;RS(0.5)S(0.5)PAAFINPPIGTVTPALK;RS(0.5)S(0.5)PAAFINPPIGTVTPALK 193.81 3.0451e-13 2586980000.0 1709660.0 1925420.0 1655610.0 1228990.0 1276150.0 1687330.0 1335240.0 1625930.0 2123850.0 1743500.0 True False 1614821.7516772836 1832919.9330856572 1762333.2696696627 1345792.8400906816 1376575.7446997445 1676798.7475867155 1470219.0898866083 1620290.0283249144 1738212.3779015671 1728053.9464224759 0.9344741551734467 1.0606844403673168 1.0198369520339072 0.7787909879068446 0.7966046126914132 0.9703393525752642 0.8507946716191047 0.9376385683325101 1.0058785383987126 1.0 20.720716825611056 -5.1676264180586005 24.999999911309132 0.8989671917069993 1.0105682861015808 0.24108464447576217 0.07991002543489757 74.61370293124128 19879.015565711452 0.022224930552643813 0.038494708293315916 6.79788137801787e-06 5.1676264180586005 0.11160109439458143 RS(ph)SPDDGNDVSPYSLSPVSNK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSPDDGNDVSPYSLSPVSNK 21 1 K7EQT1;Q9UM11-2;Q9UM11 K7EQT1 FZR1 Fizzy-related protein homolog 1 RS(0.5)S(0.5)PDDGNDVSPYSLSPVSNK;RS(0.5)S(0.5)PDDGNDVSPYSLSPVSNK 134.32 1.4883000000000002e-06 1099510000.0 476900.0 530640.0 445750.0 386580.0 392170.0 396680.0 434910.0 432010.0 530400.0 373380.0 True False 450445.40632341953 505147.2578931215 474483.75822521717 423320.44697048527 423031.5478579311 394204.17297902476 478874.94711256796 430511.45814189216 434092.7302959208 370072.1436852448 1.217182687239854 1.364996708108788 1.282138540610549 1.1438862778348684 1.143105621637195 1.0652089861546155 1.2940043050629138 1.1633176543762032 1.1729948814118987 1.0 18.497447018668158 -1.0000003123457268 0.02308627130356264 1.1822051314681883e-08 2.775475120339828 0.44684550460092776 0.07707207023767303 2331.5724279931537 4.152176241397378 176.7199843581146 349.52960416091423 0.09999992807976442 1.0000003123457268 2.7754751085177767 RS(ph)SPPGHYYQK ddPTM_KYSE-520_SHP099_60min_R1 4 RSSPPGHYYQK 11 1 D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;D6RDK6;D6RBN5;Q9NX40-3;Q9NX40-2;Q9NX40-4;Q9NX40 D6RI08 OCIAD1 OCIA domain-containing protein 1 1 RS(0.902)S(0.098)PPGHYYQK;RS(0.5)S(0.5)PPGHYYQK;RS(0.96)S(0.04)PPGHYYQK;RS(0.5)S(0.5)PPGHYYQK 153.79 2.7373e-05 14880200000.0 2890840.0 4189330.0 3611360.0 6706100.0 3037940.0 3169550.0 3846870.0 3070680.0 4326530.0 2656510.0 True False 2730479.3424533308 3988068.2984874696 3844154.043980297 7343445.727737522 3277008.594485869 3149767.662765127 4235749.161433219 3060028.527782098 3540941.214945722 2632975.388133504 1.0370318517823087 1.5146622017285853 1.4600037893652278 2.789029385095481 1.244602820540953 1.1962769105099662 1.6087310122697003 1.1621941251609376 1.34484402357284 1.0 21.32826260510857 RS(ph)SPPPPPSGSSSR ddPTM_KYSE-520_SHP099_60min_R1 4 RSSPPPPPSGSSSR 14 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 RS(0.5)S(0.5)PPPPPSGSSSR;RS(0.5)S(0.5)PPPPPSGSSSR;RS(0.842)S(0.158)PPPPPSGSSSR;RS(0.5)S(0.5)PPPPPSGSSSR 69.024 0.015555000000000001 6871900000.0 67795.0 47027.0 58957.5 54284.799999999996 44747.3 39760.899999999994 53930.7 57579.600000000006 67054.4 39605.6 True False 64034.276204018075 44767.75233103388 62757.99478533529 59444.01107067978 48268.65793269046 39512.73747454301 59382.54146891022 57379.869806779665 54879.01126386654 39254.72519669055 1.63125014589114 1.1404423825850172 1.5987373359736634 1.5143147932593686 1.229626693113619 1.0065727699419538 1.5127488772718902 1.4617315372677016 1.3980230657300137 1.0 15.26057870508301 -10.94704514221828 2.448721510422682 0.7176029967693183 1.380721096290305 0.26590489618652935 0.1931286870636317 28298174.80242797 13554789.028192438 45528831.88878384 0.04879922163749994 1.1296784854965928e-11 10.94704514221828 0.6631180995209867 RS(ph)SPSARPPDVPGQQPQAAK ddPTM_KYSE-520_SHP099_60min_R1 9 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.775)S(0.211)PS(0.015)ARPPDVPGQQPQAAK;RS(0.651)S(0.177)PS(0.171)ARPPDVPGQQPQAAK;RS(0.494)S(0.494)PS(0.012)ARPPDVPGQQPQAAK;RS(0.49)S(0.49)PS(0.019)ARPPDVPGQQPQAAK;RS(0.452)S(0.452)PS(0.096)ARPPDVPGQQPQAAK;RS(0.842)S(0.108)PS(0.05)ARPPDVPGQQPQAAK;RS(0.899)S(0.096)PS(0.004)ARPPDVPGQQPQAAK;RS(0.499)S(0.499)PS(0.002)ARPPDVPGQQPQAAK;RS(0.492)S(0.492)PS(0.016)ARPPDVPGQQPQAAK 177.41 1.8157e-09 54505920000.0 6320100.0 5623600.0 5868260.0 4986250.0 4945580.0 5257150.0 4703340.0 4978380.0 6342700.0 5228560.0 True False 5969511.454193 5353433.814804306 6246537.42914797 5460141.700829269 5334769.009499008 5224338.176809224 5178799.507374911 4961111.161742625 5191025.566455392 5182239.026158122 1.1519174287525147 1.033034907842354 1.205374240288347 1.0536259854608003 1.0294332203842718 1.0081237377200474 0.9993362871210976 0.9573296670996221 1.0016955104256902 1.0 22.305144129400283 -5.696802179147517 2.1627264094696788 0.99320039857995 1.1210291570040736 0.637749367448603 0.043664714209948385 0.1950970419751408 1.8702830102008179 0.013969181961907398 0.018807119004049588 2.0100081615255353e-06 5.696802179147517 0.12782875842412356 RS(ph)SPTQETQAPFIAK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSPTQETQAPFIAK 15 1 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.491)S(0.491)PT(0.019)QETQAPFIAK;RS(0.487)S(0.487)PT(0.026)QETQAPFIAK 133.93 1.0877000000000001e-05 2773800000.0 1569440.0 1610600.0 1484720.0 1456520.0 1439360.0 1567600.0 1198040.0 1312160.0 1993810.0 1437890.0 True False 1482380.0345989256 1533224.3584401116 1580427.4268359947 1594947.2228812948 1552629.443161873 1557816.0269283068 1319149.574943644 1307608.4232204477 1631784.3638599378 1425151.4132614913 1.0401561692357062 1.0758326056957646 1.108954046657506 1.1191422946641312 1.0894487622256537 1.0930880834361378 0.9256206482122067 0.9175224548442584 1.1449901734480004 1.0 20.44268377390469 -6.736502276319531 24.932593259389094 0.9901601929997793 1.0896929303059282 0.34322712181425674 0.06116092444167997 232.04717849770492 232005.13512236273 0.023311753474003136 0.01804917816750334 1.834415552151235e-07 6.736502276319531 0.09953273730614887 RS(ph)SPVPPVPER ddPTM_KYSE-520_SHP099_60min_R1 4 RSSPVPPVPER 11 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RS(0.5)S(0.5)PVPPVPER;RS(0.5)S(0.5)PVPPVPER;RS(0.5)S(0.5)PVPPVPER;RS(0.5)S(0.5)PVPPVPER 95.428 0.0014669000000000001 18889340000.0 6827330.0 5869200.0 5260100.0 4757770.0 5284840.0 5684040.0 4842810.0 5696960.0 6448930.0 5671250.0 True False 6448604.394955064 5587234.822151195 5599174.462457576 5209947.030324284 5700726.841373659 5648563.797972422 5332368.496070939 5677198.575440462 5277966.87629577 5621007.137165736 1.1472329135320445 0.9939917679891845 0.9961158784937659 0.9268707374300329 1.0141824591683617 1.0049024418817196 0.9486500134137285 1.0099966850963755 0.9389717442979556 1.0 22.422397216072458 -4.243184692371299 3.386449769259528 0.9798937280854378 1.1726634156821254 0.7375646035078318 0.029750702168717686 0.16650629225061153 3.0999394580052266 0.0072177175114012965 0.08501231836187936 5.7123565567857184e-05 4.243184692371299 0.19276968759668756 RS(ph)SPVPPVPERR ddPTM_KYSE-520_SHP099_60min_R1 6 RSSPVPPVPERR 12 2 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RS(0.643)S(0.357)PVPPVPERR;RS(0.5)S(0.5)PVPPVPERR;RS(0.5)S(0.5)PVPPVPERR;RS(0.5)S(0.5)PVPPVPERR;RS(0.5)S(0.5)PVPPVPERR;RS(0.5)S(0.5)PVPPVPERR 115.87 9.447700000000001e-05 10068320000.0 806204.0 769765.0 726695.0 584258.0 665424.0 723269.0 484469.0 592898.0 933867.0 654412.0 True False 761482.2569921709 732784.3339591786 773538.9224531096 639785.7046564276 717789.083055349 718754.8098879873 533443.8544817974 590841.3752214331 764300.2936713065 648614.4188048318 1.1740137667542372 1.1297688005601885 1.1926021069319885 0.9863883473872314 1.106649902075846 1.1081388095139784 0.8224360097710236 0.9109285240839171 1.1783584692422395 1.0 19.307001569934215 -5.584190458021321 0.8722529660423706 0.9870705830178121 1.1733893046206492 0.28664103854045964 0.1005121494816676 0.8617297923497167 1.3583902027118735 0.05011528493503021 0.1036391839947245 2.6050108828777213e-06 5.584190458021321 0.18631872160283702 RS(ph)SQPPADRDPAPFR ddPTM_KYSE-520_SHP099_60min_R1 4 RSSQPPADRDPAPFR 15 2 Q10570 Q10570 CPSF1 Cleavage and polyadenylation specificity factor subunit 1 1 RS(0.532)S(0.468)QPPADRDPAPFR;RS(0.5)S(0.5)QPPADRDPAPFR;RS(0.584)S(0.416)QPPADRDPAPFR;RS(0.588)S(0.412)QPPADRDPAPFR 90.22 0.001433 2050120000.0 627999.0 725150.0 615098.0 614774.0 660773.0 653365.0 677628.0 745190.0 873160.0 633013.0 True False 593162.6435850302 690312.7055276585 654748.2012715978 673201.9361214563 712772.0758159184 649287.1066815585 746129.2512519722 742605.1098186543 714616.1545723735 627404.997296661 0.9454222490111285 1.1002665080801903 1.0435814252241409 1.0729942206742429 1.1360637528981818 1.0348771678249016 1.1892306476149628 1.183613635559747 1.1390029688183623 1.0 19.259037494766556 -2.55191440469816 0.5555900226245299 1.1239004757548878 1.6752756084088572e-17 0.3441851418034765 0.06136628175955711 25.29530264804727 1.3023147255159753 0.030215030607835088 27.692604726116276 0.0028059866166665086 2.55191440469816 -1.1239004757548878 RS(ph)SQPSPTAVPASDS(ph)PPTKQEVK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSQPSPTAVPASDSPPTKQEVK 23 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 RS(0.543)S(0.457)QPS(0.001)PTAVPAS(0.001)DS(0.997)PPT(0.003)KQEVK 146.78 4.875899999999999e-07 962330000.0 744180.0 787980.0 818290.0 666610.0 680150.0 584850.0 632030.0 701550.0 906870.0 697500.0 True False 702898.8519139488 750124.2580179063 871038.2827102927 729964.413976395 733673.9354758698 581199.7342109077 695921.7604183757 699116.4867930013 742205.2683323182 691320.6926467881 1.016747884723127 1.0850597501225996 1.2599626945570492 1.0558984010469232 1.0612642486758617 0.8407092980042712 1.0066554752671615 1.011276668309126 1.0736048786428098 1.0 19.3989955835509 -5.810779036578888 2.8907480202318645 0.9870249332658175 1.1182607970724208 0.3111567435604291 0.08133242280606766 0.31014809510819014 5.288182434858523 0.027387299148036198 0.03325158229807449 1.5460408450713917e-06 5.810779036578888 0.13123586380660324 RS(ph)SQPSPTAVPASDSPPTK ddPTM_KYSE-520_SHP099_60min_R1 3 RSSQPSPTAVPASDSPPTK 19 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RS(0.499)S(0.499)QPS(0.002)PTAVPASDSPPTK;RS(0.499)S(0.499)QPS(0.001)PTAVPASDSPPTK;RS(0.489)S(0.489)QPS(0.018)PT(0.003)AVPASDSPPTK 182.09 7.9081e-11 2705100000.0 3907230.0 3896650.0 3479600.0 2836480.0 2929400.0 3588310.0 3005020.0 3793970.0 4278990.0 3995180.0 True False 3690488.163030101 3709449.085009104 3703900.583556851 3106058.206381191 3159927.1139939916 3565914.02627399 3308796.747768979 3780809.603589252 3502033.2805598495 3959785.8134030085 0.9319918644434267 0.9367802350453983 0.935379022526915 0.7844005592090015 0.7980045545136127 0.9005320475173559 0.8355999298167659 0.9548015427481049 0.8843996735142171 1.0 21.91699096571535 -8.31739816093826 0.9541889581686187 0.9987166469291988 0.8767137927349982 0.27488405855245857 0.05689597437075138 1.5664982616993068 2.6224767811475163 0.059660640661716315 0.019665891390975077 4.815061506354396e-09 8.31739816093826 -0.12200285419420065 RS(ph)SQPSPTAVPASDSPPTKQEVK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSQPSPTAVPASDSPPTKQEVK 23 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RS(0.5)S(0.5)QPSPTAVPASDSPPTKQEVK;RS(0.496)S(0.496)QPS(0.008)PTAVPASDSPPTKQEVK 178.7 3.4033000000000004e-11 1891170000.0 1683720.0 1971800.0 1935200.0 1016970.0 1205180.0 1211510.0 896390.0 903040.0 2326220.0 1144270.0 True False 1590320.6951873926 1877071.7682678583 2059946.0884294752 1113622.5230368194 1300020.8094638097 1203948.516703184 987005.8491233473 899907.5650111214 1903837.0872341231 1134132.6580285877 1.4022351652863752 1.6550724952499725 1.8163184649053206 0.9819155767655786 1.1462687369602582 1.0615588116437402 0.8702737216288399 0.7934764585435629 1.6786723085317712 1.0 20.11315796964533 -5.26824192567083 24.991187930327435 1.061169758993516 1.6275950933083805 0.514878565035581 0.24368710430053162 398.94049718460775 1465627.2753788342 0.06743323937848344 0.10258912782866711 5.392101694178019e-06 5.26824192567083 0.5664253343148644 RS(ph)SRS(ph)S(ph)PELTR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSRSSPELTR 11 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 RS(0.76)S(0.435)RS(0.807)S(0.992)PELT(0.006)R 53.924 0.038298 415270000.0 368820.0 338110.0 259730.0 343550.0 334240.0 347750.0 351470.0 334940.0 399020.0 333580.0 True False 348360.81937555794 321866.6880865429 276472.6113826934 376200.8887079261 360542.7864345434 345579.56325868715 387000.01761664264 333778.17131558387 326568.0264756383 330624.74072131264 1.0536441362964886 0.973510595076271 0.8362127128766063 1.1378485708213533 1.0904894341783364 1.045232012900027 1.170511368182363 1.0095377937760843 0.9877301552302955 1.0 18.3348351602904 -5.278378613360544 24.99249425675129 1.0683257722129453 0.95636127357786 0.30824748122563006 0.07423860349855418 949.1510362683335 1400395.0874689787 0.021309146157785324 0.03170117305988541 5.267704282696873e-06 5.278378613360544 -0.11196449863508529 RS(ph)SRS(ph)SPELTR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSRSSPELTR 11 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RS(0.817)S(0.183)RS(0.817)S(0.183)PELTR 108.36 0.011154 77528000.0 248310.0 225380.0 187700.0 199840.0 192300.0 214860.0 191610.0 245790.0 283750.0 218790.0 True False 234535.74930628698 214552.40649772325 199799.44233061856 218832.7335159133 207432.9159626699 213518.9790417297 210979.80873339128 244937.41185781735 232228.15275540657 216851.6908160443 1.081549092025499 0.9893969730663915 0.9213644660954422 1.0091354726929453 0.9565658223925754 0.9846313775014937 0.9729221291263338 1.1295158038015862 1.070907733675022 1.0 17.726349166530667 -7.243603140607601 24.804359087041917 1.0751588290174765 0.9849149997862222 0.35192372022373086 0.04853115285716516 677.3166985630344 941927.4722191743 0.022504213956083777 0.012959436500338319 5.706855279562172e-08 7.243603140607601 -0.09024382923125429 RS(ph)SSDLITLPATTPPCPTKK ddPTM_KYSE-520_SHP099_60min_R1 3 RSSSDLITLPATTPPCPTKK 20 2 H0Y507;Q5TCZ1-2;Q5TCZ1-3;Q5TCZ1 H0Y507 SH3PXD2A SH3 and PX domain-containing protein 2A 1 RS(0.657)S(0.099)S(0.245)DLITLPATTPPCPTKK;RS(0.452)S(0.452)S(0.096)DLITLPATTPPCPTKK;RS(0.489)S(0.489)S(0.023)DLITLPATTPPCPTKK 152.88 5.606800000000001e-07 2585490000.0 1619290.0 1441570.0 1542360.0 1173560.0 1337350.0 1346400.0 1115020.0 1284230.0 1790880.0 1422860.0 True False 1529464.7557254122 1372314.8133593167 1641782.9934632522 1285094.7895563191 1442591.8365193778 1337996.6181782796 1227737.103146524 1279775.3058715346 1465701.3364109332 1410254.5673683307 1.084530971297997 0.9730972301831908 1.1641749166797422 0.9112502233936589 1.0229300935443106 0.94876247816386 0.8705783562449994 0.9074782209425616 1.0393168512448583 1.0 20.427524178707277 -5.282150716402978 24.875006150776585 0.9521124076807463 1.0638506784871786 0.3902509404665373 0.06630441961191388 768.4315848214073 922910.5430995375 0.01851291762483318 0.02748965718622181 5.222149294675498e-06 5.282150716402978 0.11173827080643228 RS(ph)SSPAELDLKDDLQQTQGK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSSPAELDLKDDLQQTQGK 20 2 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 RS(0.431)S(0.431)S(0.139)PAELDLKDDLQQTQGK 133.46 3.5295e-06 341080000.0 206240.0 167480.0 189150.0 187050.0 182020.0 206210.0 179400.0 181340.0 240170.0 164050.0 True False 194799.4560707526 159434.00940739465 201342.91165070032 204827.17576136673 196343.93844786854 204922.9669002841 197535.5027752743 180710.97386507434 196561.18219300808 162596.64462896885 1.1980533578369206 0.9805491975016394 1.2382968425341558 1.2597257232999133 1.2075522154587386 1.2603148568526747 1.2148805605800344 1.1114065378005848 1.2088883054231734 1.0 17.31093796046541 -9.39518811866078 0.9003794502985099 0.9933214621943287 1.187172873549991 0.3293151573193378 0.07972886584792406 25.531915669016392 14.303543394396396 0.7145692952515116 0.02686651287646541 4.0254263150219134e-10 9.39518811866078 0.1938514113556622 RS(ph)SSSGDQSSDSLNSPTLLAL ddPTM_KYSE-520_SHP099_60min_R1 2 RSSSSGDQSSDSLNSPTLLAL 21 1 P15408-3;P15408-2;P15408 P15408-3 FOSL2 Fos-related antigen 2 1 RS(0.423)S(0.423)S(0.12)S(0.034)GDQSSDSLNSPTLLAL;RS(0.47)S(0.47)S(0.038)S(0.01)GDQS(0.006)S(0.006)DSLNSPTLLAL 152.13 6.483800000000001e-07 529310000.0 420340.0 495980.0 406470.0 356230.0 378090.0 436730.0 297240.0 365790.0 396890.0 376350.0 True False 397022.9022729842 472152.3763188423 432671.7065749945 390085.99209554517 407843.5319621726 434004.20607323234 327287.9199828465 364521.15986602753 324824.78078270744 373015.831795869 1.0643593875400252 1.2657703402176916 1.1599285330381683 1.0457625624561098 1.0933678873591695 1.1635007661303205 0.8774102654226031 0.9772270472034814 0.8708069553478528 1.0 18.508877338077315 -6.757628139073879 24.998228215938074 0.9294633075764468 1.1337680978431113 0.6748202404613455 0.06826026218654842 58.13548352758196 381318.4497410685 0.027213073593583242 0.020265627322605 1.7473176383256938e-07 6.757628139073879 0.20430479026666448 RS(ph)STLSQLPGDK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSTLSQLPGDK 12 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 RS(0.721)S(0.27)T(0.007)LS(0.002)QLPGDK 94.71700000000001 0.0020844 0.0 164350.0 145110.0 151470.0 110710.0 142880.0 159200.0 152950.0 139090.0 168350.0 140020.0 True False 155233.17787639747 138138.69778544933 161233.99856056907 121231.84511382466 154123.84312400562 158206.3737477584 168411.6786481506 138607.52925384993 137781.88375814148 138779.53173391157 1.1185596026799776 0.9953823597726865 1.1617995575147961 0.8735570987965869 1.1105660986053363 1.1399834815057224 1.2135195770155367 0.9987606062802443 0.9928112743766644 1.0 17.082435278350896 -7.462196406361388 24.999879025097812 0.9961966678125682 1.0833454602044732 0.17556439951190406 0.08947837750951121 433.1759004772274 178459.6404551023 0.049864083074870925 0.02395387716827581 3.449876860062968e-08 7.462196406361388 0.08714879239190498 RS(ph)STS(ph)GDTEEEEEEEVVPFSSDEQK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 RS(0.489)S(0.332)T(0.332)S(0.597)GDT(0.25)EEEEEEEVVPFSSDEQK 123.36 4.2299e-07 639710000.0 414090.0 356120.0 305050.0 348440.0 367490.0 342620.0 355310.0 412160.0 459590.0 349040.0 True False 391119.6022320504 339011.460652982 324714.01109725726 381555.6328376939 396409.3722679229 340481.58149156364 391228.20229143166 410730.3131588672 376140.0413210832 345947.77714901057 1.1305741157099063 0.9799498162607333 0.9386214699029349 1.1029284130169332 1.1458647762814702 0.9841993618155481 1.1308880360948739 1.1872610269206982 1.087274051652796 1.0 18.400194745436124 -5.301455544629519 24.623235742327147 1.098477530390894 1.0127385754282243 0.17221598295012608 0.07384769400151078 648.4529964145883 399012.6339506938 0.02098890293394931 0.031132191773150585 4.995103086021561e-06 5.301455544629519 -0.0857389549626697 RS(ph)STSGDTEEEEEEEVVPFSSDEQK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.426)S(0.426)T(0.141)S(0.006)GDTEEEEEEEVVPFSSDEQK 231.94 4.4898e-23 1196600000.0 984370.0 958990.0 755630.0 852560.0 736040.0 966210.0 929910.0 939300.0 1209800.0 948120.0 True False 929765.0338070547 912918.6809266623 804339.1188507474 933587.0460684892 793962.1605052712 960179.5249925987 1023914.377847021 936041.7875342675 990130.81657618 939720.3944261991 0.9894060396281776 0.9714790551971555 0.8559345137357408 0.9934732199129774 0.8448919116947237 1.0217715085122656 1.0895947176630463 0.9960854240114925 1.0536440652442813 1.0 19.84187203380081 -6.489518246209751 22.55455077629556 1.0375302966450342 0.9326551449460987 0.47748165586746893 0.053020559002735154 162.6724356430622 109980.49491809361 0.017945827847183786 0.015809337946830454 3.23952811773485e-07 6.489518246209751 -0.10487515169893546 RS(ph)STSGDTEEEEEEEVVPFSSDEQKR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.437)S(0.437)T(0.05)S(0.05)GDT(0.026)EEEEEEEVVPFSSDEQKR 134.21 1.5971000000000001e-06 674920000.0 265170.0 252810.0 236540.0 223730.0 204450.0 259900.0 252530.0 257020.0 313120.0 251320.0 True False 250460.49149671054 240664.62812445333 251787.7468773814 244993.23193312253 220539.0518386262 258277.8676949904 278058.19685529574 256128.4576089191 256265.3011128562 249093.5003240013 1.005487863677419 0.9661618139831656 1.0108162057615941 0.9835392397411195 0.8853665453003242 1.0368711642778425 1.1162804187729485 1.0282422354488066 1.0287916014650176 1.0 17.92632785180573 -6.495153721450678 24.9493722261973 1.050095478168477 0.9718434905602261 0.4123163106782509 0.042567091875591254 668.3108568235441 601404.9816525177 0.015142878384310556 0.013322936193977702 3.197763039631896e-07 6.495153721450678 -0.07825198760825092 RS(ph)STSSEPTPTVK ddPTM_KYSE-520_SHP099_60min_R1 3 RSSTSSEPTPTVK 13 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 RS(0.499)S(0.499)T(0.002)SSEPTPTVK;RS(0.469)S(0.469)T(0.059)S(0.003)S(0.001)EPTPTVK;RS(0.453)S(0.453)T(0.091)S(0.002)SEPTPTVK 145.61 4.7001999999999995e-05 12294200000.0 21499000.0 18686400.0 17713300.0 15374400.0 15886900.0 17491800.0 16690600.0 18076300.0 22580300.0 19565400.0 True False 20306407.612806026 17788677.295141786 18855127.660282064 16835578.35351809 17137108.645903993 17382627.18794625 18377848.73255851 18013597.534340158 18480286.7230411 19392065.777650885 1.047150305987973 0.9173172935316162 0.9723114533786474 0.8681683811593134 0.8837175390387907 0.8963783119991018 0.9476993809364422 0.9289158638839089 0.9529818501512819 1.0 24.20896316174734 -10.024896251038879 13.800677184795383 0.9999999996392273 0.9311302754155601 0.13512008845293444 0.048501682688303106 0.0 0.0 0.04736298212123403 0.01148721047235816 9.442864306949333e-11 10.024896251038879 -0.0688697242236671 RS(ph)SVAQEDSK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSVAQEDSK 10 1 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RS(0.5)S(0.5)VAQEDSK 50.563 0.050199 14437000.0 45791.0 33028.0 34363.0 23158.0 30091.0 41912.0 43193.0 41161.0 54847.0 42262.0 True False 43250.88194790457 31441.285303961275 36578.093962743966 25358.929357293426 32458.990505630263 41650.411661533006 47559.36996305706 41018.22209804961 44888.16738035519 41887.591559338485 1.0325464018773873 0.7506109597975132 0.8732441422641113 0.6054043312891277 0.7749070619075449 0.9943377050583229 1.135404739030743 0.9792451790870499 1.0716340020830764 1.0 15.354235314475089 -6.343715389395611 4.518137307271618 1.0462861780645387 0.7967432180055217 0.5303599622399994 0.10800120192776336 0.17686997300988644 6.54587946766034 0.03910647542395728 0.03445434436336838 4.5319447913913066e-07 6.343715389395611 -0.249542960059017 RS(ph)SVNFVK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSVNFVK 8 1 Q5JX83;Q96MM6 Q5JX83 HSPA12B Heat shock 70 kDa protein 12B 1 RS(0.766)S(0.234)VNFVK 89.029 0.01207 448160000.0 1267800.0 1094200.0 1002000.0 1147400.0 1130000.0 1072800.0 1089800.0 1079200.0 1315100.0 1060700.0 True False 1197472.6067033566 1041632.9895723162 1066590.5232566858 1256448.5510216102 1218924.571179496 1066104.2572650448 1199967.6194230453 1075456.5070871746 1076310.9909731622 1051303.0232121123 1.139036586278087 0.990801858811125 1.0145414782484548 1.1951345361708405 1.1594417064028208 1.0140789417761868 1.141409843716333 1.022974806827117 1.02378759235814 1.0 20.00374713498515 -7.393819580001525 7.661751260537514 1.0157619728720453 1.0898253419604726 0.22980170355748952 0.06523056268612598 0.46862212175555024 26.779614271668642 0.03784139050402965 0.018013443148190103 4.0381311517774544e-08 7.393819580001525 0.07406336908842737 RS(ph)SYLLAITTER ddPTM_KYSE-520_SHP099_60min_R1 1 RSSYLLAITTER 12 1 Q9P227;Q9P227-2 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 RS(0.644)S(0.355)YLLAIT(0.001)TER 134.14 9.9195e-05 0.0 317750.0 373920.0 310590.0 311490.0 361310.0 286150.0 315920.0 363430.0 422520.0 358880.0 True False 300123.77408107923 355956.32193463726 330611.1283615708 341093.9159471168 389743.041427313 284364.0317080468 347856.27668207727 362169.3461551993 345801.0188624291 355700.60240441514 0.8437539100365435 1.000718917900317 0.9294646287544974 0.9589354463878832 1.095705317316818 0.7994477090728624 0.9779468303699435 1.0181859229561536 0.9721687748767692 1.0 18.4403038921459 -4.2523983544386 23.936493061711314 0.9699189531619258 0.84375378902596 0.22599355493209472 0.07133902364775609 1026.4107481681938 2717357.9478729824 0.017375223477597877 0.1992025305481768 5.592444020391748e-05 4.2523983544386 -0.1261651641359658 RS(ph)TPLKER ddPTM_KYSE-520_SHP099_60min_R1 4 RSTPLKER 8 2 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 RS(0.939)T(0.061)PLKER;RS(0.871)T(0.129)PLKER;RS(0.5)T(0.5)PLKER;RS(0.5)T(0.5)PLKER 68.132 0.019074 5985100000.0 4318750.0 4009240.0 3746370.0 3278510.0 3443220.0 3291520.0 3076650.0 2649070.0 4251830.0 3127420.0 True False 4079180.328285319 3816630.092408069 3987867.0046039373 3590098.604680025 3714181.8247581054 3270976.4027526495 3387667.8072104137 2639880.994467586 3479804.8519119676 3099713.491895944 1.3159862480678117 1.231284795316235 1.2865276145779374 1.158203367526118 1.1982339124143764 1.0552512067016724 1.0928970745416675 0.8516532258124602 1.1226214490499702 1.0 21.56370344194527 -6.110255998125257 0.8482870047640827 0.9890290457558751 1.2821029206587111 0.6965868167147378 0.07311337078717897 0.3187786143421533 0.5036285552037221 0.04169287959766242 0.04599721666312585 7.757896868004774e-07 6.110255998125257 0.293073874902836 RS(ph)TS(ph)PIIGSPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 RS(0.777)T(0.32)S(0.885)PIIGS(0.018)PPVR 104.16 0.00097993 2575800000.0 310960.0 282590.0 253160.0 240190.0 267010.0 249200.0 243500.0 265810.0 369150.0 222040.0 True False 293710.4289166082 269013.9522237624 269479.09867032187 263017.58538424305 288022.1679209173 247644.6503639534 268115.35633098875 264887.96715052065 302121.6655142142 220072.89834450625 1.3346051745855065 1.2223856469715908 1.2244992486465744 1.195138462585749 1.3087580074037193 1.1252846317145595 1.2183024731708487 1.2036373817182162 1.372825403704491 1.0 17.74762196482121 -11.25149975559892 2.426966874812208 0.0268037110187691 1.238656327565419 0.5229012850224943 0.06998177058421769 860422.0424707189 620661.0371280772 4630306.893728132 0.01697876565695699 5.60402732733135e-12 11.25149975559892 1.2118526165466499 RS(ph)TSPIIGSPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 RS(0.333)T(0.333)S(0.333)PIIGSPPVR 62.94 0.02139 762870000.0 281980.0 224910.0 190020.0 163820.0 167190.0 196130.0 188150.0 190330.0 235340.0 176920.0 True False 266338.0072868061 214104.98600320736 202268.99324274965 179389.40354572085 180346.90181902648 194905.8799192707 207170.03816704507 189669.78965335607 192608.18843861643 175352.62644167698 1.5188709327681 1.220996744376792 1.1534985095305952 1.023020910413261 1.028481326334799 1.1115081870991947 1.1814481617470993 1.081647840139087 1.098404924677183 1.0 17.419899513958278 -4.177043457462305 1.4971608959853024 1.0838206204427048 1.7529547462532782 0.869107837891475 0.051628273568984175 0.49162639811333414 0.8789815562228525 0.015496800949994699 0.5163153167499546 6.65206589303302e-05 4.177043457462305 0.6691341258105734 RS(ph)WDQQIK ddPTM_KYSE-520_SHP099_60min_R1 3 RSWDQQIK 8 1 F8W8D3;Q14493;E7EUV9;Q14493-2;H0YAE8 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 RS(1)WDQQIK;RS(1)WDQQIK;RS(1)WDQQIK 97.749 0.0032775999999999994 1715420000.0 2121700.0 1995340.0 1884190.0 1721830.0 1912600.0 1865070.0 1728450.0 1908720.0 2138060.0 1975200.0 True False 2004005.071495908 1899480.8713335989 2005647.9022105904 1885472.2055129332 2063110.7387946043 1853429.4063174103 1903178.5940463939 1902099.0958185964 1749842.2001065174 1957701.2646823477 1.0236521310216722 0.9702608388730875 1.0244912941485087 0.9631051680496645 1.0538434928831495 0.9467376048399007 0.9721496473340633 0.9715982362238638 0.8938249321662685 1.0 20.90072920308977 -6.306742336998741 24.99930773764141 0.9560424326970461 1.0035509473542743 0.3327390451714566 0.03536563604739464 531.8929834389162 293510.07106258435 0.011743324037133273 0.01035666353037291 4.93466486341539e-07 6.306742336998741 0.04750851465722816 RS(ph)WGQQAQEYQEQK ddPTM_KYSE-520_SHP099_60min_R1 4 RSWGQQAQEYQEQK 14 1 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(1)WGQQAQEYQEQK;RS(1)WGQQAQEYQEQK;RS(1)WGQQAQEYQEQK;RS(1)WGQQAQEYQEQK 236.75 2.5639e-18 2329920000.0 1520160.0 1415980.0 1387910.0 1374320.0 1375220.0 1223260.0 1532740.0 1473110.0 1623880.0 1342330.0 True False 1435833.694436169 1347954.1953706879 1477376.8993345166 1504934.9595956248 1483441.9900685546 1215625.180594743 1687684.317300858 1468000.125236459 1329024.3266835238 1330438.0005169378 1.0792187940199243 1.0131657355299113 1.1104440032233642 1.1311575278298476 1.1150027205267494 0.9137029911370657 1.2685178239385173 1.1033961181701604 0.9989374372703841 1.0 20.343469850499147 -4.770234129273334 24.959909574743204 1.0876876066639398 1.046192259934956 0.016247648919479274 0.09171575210407501 712.1516933516571 2021137.2364391107 0.023701183741096674 0.05050074801759552 1.6973283716736663e-05 4.770234129273334 -0.041495346728983806 RS(ph)YDVPPPPMEPDHPFYSNISK ddPTM_KYSE-520_SHP099_60min_R1 9 RSYDVPPPPMEPDHPFYSNISK 22 1 P18669;Q8N0Y7 P18669 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 1 RS(0.871)Y(0.129)DVPPPPMEPDHPFYSNISK;RS(0.882)Y(0.118)DVPPPPMEPDHPFYSNISK;RS(0.541)Y(0.459)DVPPPPMEPDHPFYSNISK;RS(0.998)Y(0.002)DVPPPPMEPDHPFYSNISK;RS(0.532)Y(0.468)DVPPPPMEPDHPFYSNISK;RS(0.984)Y(0.016)DVPPPPMEPDHPFYSNISK;RS(0.913)Y(0.087)DVPPPPMEPDHPFYSNISK;RS(0.992)Y(0.008)DVPPPPMEPDHPFYSNISK;RS(0.992)Y(0.008)DVPPPPMEPDHPFYSNISK 179.81 1.9044e-10 22416690000.0 8222680.0 8221450.0 8246550.0 9999690.0 7787280.0 8039750.0 9058130.0 7515320.0 9906070.0 8629240.0 True False 7766551.548893796 7826479.201351959 8778135.807946527 10950057.531083561 8400094.632437754 7989570.938056156 9973814.179229636 7489251.109008882 8107377.399703081 8552791.647047125 0.9080721090142796 0.9150789033957203 1.0263474395494252 1.2802904575448297 0.9821465293542969 0.9341477341862499 1.1661472172858465 0.8756498951537732 0.9479217703733231 1.0 23.02796396452602 -7.301062886042961 24.995707815736196 0.9338393966561168 1.0297963658534144 0.11373933802021197 0.11344971914224243 1251.5708372642985 789522.2313746593 0.06505475490871111 0.03125184715379377 4.999621349856611e-08 7.301062886042961 0.09595696919729757 RS(ph)YSPDGK ddPTM_KYSE-520_SHP099_60min_R1 2 RSYSPDGK 8 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 RS(0.658)Y(0.039)S(0.303)PDGK;RS(0.593)Y(0.026)S(0.381)PDGK 60.434 0.0224 6047500000.0 1394220.0 1326720.0 1173320.0 1085240.0 1257210.0 1223590.0 1163870.0 1194750.0 1436340.0 1228410.0 True False 1316879.8372913366 1262982.3797526814 1248954.0845783777 1188380.8833106956 1356145.2744536034 1215953.1209423346 1281525.337876581 1190605.6911067455 1175536.8631848472 1217527.2430885197 1.0816019475266834 1.0373339791139744 1.0258120232366523 0.9760610204467475 1.1138520983016769 0.9987071154628197 1.0525639940718832 0.977888337090937 0.9655117533163735 1.0 20.21552262338044 -7.269191821765013 24.339777372977956 0.9787750238909152 1.0388293373597195 0.347183506351314 0.037410016306793636 471.64930547573744 1480789.0670901532 0.01936617521760565 0.009583923886093342 5.380320888200836e-08 7.269191821765013 0.0600543134688043 RS(ph)YSPDGKES(ph)PSDKK ddPTM_KYSE-520_SHP099_60min_R1 3 RSYSPDGKESPSDKK 15 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 RS(0.815)Y(0.02)S(0.165)PDGKES(0.901)PS(0.099)DKK;RS(0.679)Y(0.049)S(0.272)PDGKES(0.906)PS(0.094)DKK;RS(0.462)Y(0.077)S(0.462)PDGKES(0.885)PS(0.113)DKK 111.38 0.00043371 5258970000.0 2356350.0 2085570.0 2149320.0 1967920.0 2002770.0 1970870.0 1919690.0 1962730.0 2469030.0 1644260.0 True False 2225638.5682327296 1985376.0866956103 2287868.6062335917 2154950.525123279 2160376.6047974825 1958569.069272893 2113750.999568936 1955921.7477346272 2020716.3911812538 1629693.1356149237 1.3656795378185973 1.218251487539388 1.403864663987998 1.3223044744004293 1.325633984450894 1.2018023678634913 1.2970239325278652 1.2001779384047104 1.2399367384086006 1.0 20.636168905925103 -9.49450081100017 0.2618029822815909 0.8611490153022894 1.3480412642094384 0.7402212365830935 0.0553829945430093 4.987111994933019 0.40985484178862913 0.6615590250106025 0.08778936949208942 3.202574114146462e-10 9.49450081100017 0.486892248907149 RS(ph)YSPDGKESPSDKK ddPTM_KYSE-520_SHP099_60min_R1 1 RSYSPDGKESPSDKK 15 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 RS(0.579)YS(0.42)PDGKESPSDKK 88.551 0.0032027 1066800000.0 639380.0 758320.0 702420.0 438690.0 467900.0 508730.0 351630.0 316080.0 886690.0 415720.0 True False 603912.3168275692 721889.1689384747 747699.1171117374 480382.9657030416 504721.06801317254 505554.8273661886 387176.19197809213 314983.5922536264 725689.4476359176 412037.04422526585 1.4656748107760007 1.7520006491062217 1.8146405222316875 1.1658732447376992 1.2249409976284442 1.226964503438665 0.9396635506549698 0.7644545476387333 1.7612237972447302 1.0 18.652414523295768 -5.2724154389647495 23.031865667259655 1.1418909736847507 1.6848948434985453 0.4603099142612409 0.25906850946431714 204.8547494192252 429861.85060159076 0.07177784527195102 0.10785368435751924 5.340532484142764e-06 5.2724154389647495 0.5430038698137947 RS(ph)YWRHLR ddPTM_KYSE-520_SHP099_60min_R1 2 RSYWRHLR 8 2 Q9HBH1 Q9HBH1 PDF Peptide deformylase, mitochondrial 1 RS(0.577)Y(0.423)WRHLR;RS(0.585)Y(0.415)WRHLR 60.59 0.02129 819360000.0 158768.0 122174.0 94098.0 99578.0 148943.0 121019.0 100638.0 113251.0 122327.0 102236.0 True False 149960.8225438386 116304.57765308725 100163.70764212319 109041.86318078259 160663.96673025456 120263.67553128136 110811.47117223 112858.15871398202 100115.50041272471 101330.26857840446 1.4799212974335125 1.1477772563397126 0.9884875373109404 1.0761035642218917 1.5855476254456047 1.1868484828718988 1.0935673291588035 1.1137655144638035 0.9880117936849262 1.0 16.628705663434502 -6.7879022184455895 3.3587525908204765 1.050742986146498 1.2379025269453527 0.2472051988433559 0.16960843660447297 0.4316961282066176 10.099716925638687 0.0798189521603037 0.054221094017602764 1.629662910510791e-07 6.7879022184455895 0.18715954079885466 RSAAGS(ph)PPAVAAAGSGNGAGGGGGVGCAPAAGAGR ddPTM_KYSE-520_SHP099_60min_R1 1 RSAAGSPPAVAAAGSGNGAGGGGGVGCAPAAGAGR 35 1 Q86VQ1 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 RS(0.034)AAGS(0.966)PPAVAAAGSGNGAGGGGGVGCAPAAGAGR 167.48 2.2422999999999998e-10 407150000.0 119200.0 134760.0 110760.0 62934.0 82171.0 108530.0 68029.0 80967.0 138440.0 112310.0 True False 112587.73838069107 128285.92732111609 117899.76682226581 68915.22843820292 88637.3902109648 107852.62401284066 74906.03521905879 80686.14437483995 113302.78578840001 111315.02077585786 1.0114334758774013 1.1524583692925914 1.059154155481558 0.6191008900494167 0.7962751980206124 0.9688955116849053 0.6729193840774497 0.7248450731308604 1.017857113969773 1.0 16.764288756574725 -5.121753577166635 7.959339581220169 0.8154141627855415 1.0875814277904878 0.4168219795125262 0.1327046196323158 0.24476688643519218 14.825286229566629 0.03535448569080148 0.06156681403943959 7.555207957763335e-06 5.121753577166635 0.27216726500494637 RSAS(ph)ASHQADIK ddPTM_KYSE-520_SHP099_60min_R1 1 RSASASHQADIK 12 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 RS(0.213)AS(0.763)AS(0.024)HQADIK 145.04 1.7925999999999997e-05 966280000.0 335280.0 493970.0 381490.0 973480.0 413630.0 412470.0 454330.0 385330.0 593370.0 311800.0 True False 316681.35003589065 470238.93973591394 406081.4558055817 1065999.2465125655 446180.32776723383 409895.62173202226 500258.1102335031 383993.38016669813 485628.9656404427 309037.69457672955 1.0247337318175058 1.521623245280716 1.3140191728448116 3.449414958821127 1.4437731564699263 1.326361246298552 1.6187608146594439 1.242545446414331 1.5714230793288166 1.0 18.237423294644774 -5.966621749206315 24.99999878271922 1.3838140139774933 1.8536369957460856 0.11528908980899522 0.6241775742386874 448.1545406958478 335661.75297207554 0.20047463148205452 0.22731568208354738 1.0798868452255516e-06 5.966621749206315 0.4698229817685924 RSAS(ph)PDDDLGSSNWEAADLGNEER ddPTM_KYSE-520_SHP099_60min_R1 1 RSASPDDDLGSSNWEAADLGNEER 24 1 E9PM92;O00193;E9PQA1 E9PM92 C11orf58;SMAP Small acidic protein 1 RS(0.059)AS(0.941)PDDDLGSSNWEAADLGNEER 204.12 6.0111e-21 654950000.0 306920.0 242890.0 264150.0 214780.0 210270.0 256350.0 229040.0 259990.0 254480.0 228320.0 True False 289894.53577014833 231221.19981467744 281177.5316549435 235192.6266240385 226817.05272735617 254750.02456179593 252193.59841498837 259088.15537212195 208272.84691875213 226297.2624302719 1.2810342142758904 1.0217587138771629 1.2425140659471372 1.039308315523735 1.0022969358599485 1.1257317999606429 1.114435038703554 1.1449018542676972 0.9203507134025823 1.0 17.78785960653539 -1.048155472552886 1.0233394763514274 1.0703134901765499 199.99999999999997 0.32029447734059746 0.08896189953851584 2149.6012863720375 2.8204497670432636 0.025925906111605425 1003067.3208466404 0.08950442923734749 1.048155472552886 198.92968650982343 RSAS(ph)PHDVDLCLVSPCEFEHR ddPTM_KYSE-520_SHP099_60min_R1 1 RSASPHDVDLCLVSPCEFEHR 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 RS(0.248)AS(0.752)PHDVDLCLVSPCEFEHR 63.291000000000004 0.012987 697780000.0 183600.0 176490.0 147060.0 229840.0 149750.0 165370.0 147060.0 137640.0 187430.0 164180.0 True False 173415.34200247392 168011.15548310912 156539.7229043195 251683.92449608422 161534.4730390527 164337.86448911313 161926.2599672903 137162.55896541735 153397.43672580025 162725.4929301073 1.0656925284408758 1.0324820804523362 0.9619864723442891 1.5466779050052453 0.9926808032988036 1.0099085369475473 0.9950884587999971 0.8429076261844874 0.9426761226139682 1.0 17.31208075890018 -5.97491225665593 24.99991599571774 0.9562401550257564 1.1471464651816201 0.26858445721107704 0.15265153596691955 325.80238477942356 324660.30050580815 0.048893318054452024 0.0554379307469329 1.0594677547297169e-06 5.97491225665593 0.19090631015586368 RSDAEEVDFAGWLCSTIGLNQPS(ph)TPTHAAGV ddPTM_KYSE-520_SHP099_60min_R1 2 RSDAEEVDFAGWLCSTIGLNQPSTPTHAAGV 31 1 Q02750;Q02750-2;H3BRW9 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 1 RSDAEEVDFAGWLCSTIGLNQPS(0.447)T(0.447)PT(0.107)HAAGV;RSDAEEVDFAGWLCSTIGLNQPS(0.499)T(0.499)PT(0.002)HAAGV 173.41 1.7146000000000002e-10 544836000.0 87799.0 110651.0 96473.0 99222.0 86075.0 86101.0 63562.0 117733.0 122244.0 108687.0 True False 82928.61444703273 105335.15986946285 102691.80394225758 108652.0290478178 92848.61280024346 85563.61172145579 69987.46726534009 117324.61170208883 100047.57112046503 107724.11773720643 0.769824030022112 0.9778233703099667 0.9532851704831299 1.008613774984679 0.8619110998592548 0.7942846367067836 0.6496917193239391 1.089121119453518 0.9287388304681373 1.0 16.716981757230716 RSDAEEVDFAGWLCSTIGLNQPST(ph)PTHAAGV ddPTM_KYSE-520_SHP099_60min_R1 6 RSDAEEVDFAGWLCSTIGLNQPSTPTHAAGV 31 1 Q02750;Q02750-2;H3BRW9 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 1 RSDAEEVDFAGWLCSTIGLNQPS(0.127)T(0.747)PT(0.127)HAAGV;RSDAEEVDFAGWLCSTIGLNQPS(0.022)T(0.955)PT(0.022)HAAGV;RSDAEEVDFAGWLCSTIGLNQPS(0.152)T(0.823)PT(0.025)HAAGV;RSDAEEVDFAGWLCSTIGLNQPS(0.143)T(0.829)PT(0.028)HAAGV;RSDAEEVDFAGWLCSTIGLNQPS(0.374)T(0.528)PT(0.099)HAAGV;RSDAEEVDFAGWLCSTIGLNQPS(0.031)T(0.966)PT(0.003)HAAGV 213.27 4.929799999999999e-22 953558000.0 178923.0 248655.9 215069.8 232671.0 162305.6 213861.0 158759.8 246922.0 320422.0 208865.0 True False 168997.78451584248 236710.09732388484 228933.5434318466 254783.98188491273 175078.12732746056 212526.21417128993 174808.78993033452 246065.48521402833 262241.44198129623 207014.61859451124 0.8163567658323975 1.1434462886292076 1.1058810483344124 1.2307535748669494 0.8457283283476414 1.026624185355598 0.8444272733837231 1.1886382077007216 1.2667774080967693 1.0 17.659373123461577 -4.250450296252545 24.127312032462314 1.0687150474318692 0.8163565262092365 0.23352402015586704 0.13905189982898805 1598.8472390076652 3510273.730493845 0.03589942666516423 0.5027838593322387 5.617585663200683e-05 4.250450296252545 -0.2523585212226327 RSDAGSYR ddPTM_KYSE-520_SHP099_60min_R1 2 RSDAGSYR 8 1 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 0 ; 108.43 0.016312 176560000.0 93520.0 104333.0 58805.0 45137.0 88394.0 107963.0 63573.0 85443.0 98275.0 98276.0 False True 88332.25917250189 99320.6860729742 62595.6643913267 49426.80690906609 95350.10490693833 107289.16287015844 69999.57925268979 85146.61817554609 80430.73731114564 97405.35109757104 0.9068522229750948 1.0196635498339774 0.6426306531006142 0.5074342051244721 0.978900068964651 1.1014709321532734 0.718642030072569 0.8741472333512215 0.8257322252303992 1.0 16.57171341047997 RSDPIEHQEILS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 RSDPIEHQEILSR 13 1 O43361 O43361 ZNF749 Zinc finger protein 749 1 RSDPIEHQEILS(1)R;RSDPIEHQEILS(1)R 53.565 0.044670999999999995 1558900000.0 625400.0 529440.0 408160.0 471700.0 500490.0 488830.0 377500.0 493480.0 579180.0 429590.0 True False 590707.8152960092 504004.9076943586 434470.64667909034 516530.2261782234 539875.7156014382 485779.03064771794 415661.3840449614 491768.2330590975 474015.5119396528 425784.1668159626 1.3873409612981964 1.1837098393379326 1.0204011340489378 1.2131268995765268 1.267956297291791 1.1409044029992947 0.9762255537900812 1.1549706902832189 1.1132765116288068 1.0 18.69976277725474 -6.524964837813214 24.940510607210467 1.071822764652433 1.202185203839272 0.3496267258292526 0.09749067955727195 91.16478485685191 1089898.1692589354 0.03840743196230786 0.02995738396190279 2.9856243370038643e-07 6.524964837813214 0.13036243918683899 RSDS(ph)ASSEPVGIYQGFEK ddPTM_KYSE-520_SHP099_60min_R1 1 RSDSASSEPVGIYQGFEK 18 1 Q05655;Q05655-2 Q05655 PRKCD Protein kinase C delta type;Protein kinase C delta type regulatory subunit;Protein kinase C delta type catalytic subunit 1 RS(0.053)DS(0.663)AS(0.114)S(0.171)EPVGIYQGFEK 106.67 0.00030959 150460000.0 193090.0 191960.0 172500.0 143170.0 170200.0 179010.0 163550.0 170440.0 234110.0 166280.0 True False 182378.9127846281 182737.95346216563 183619.62600975845 156776.83375436979 183593.77169446918 177892.73218961217 180083.2300941815 169848.78342099508 191601.52543283958 164806.88856388253 1.1066219038164433 1.1088004576418702 1.114150188804661 0.9512759759043681 1.113993312380899 1.0794010720046894 1.092692372651508 1.0305927434286717 1.1625820200990622 1.0 17.330417019684 RSDS(ph)IKFQHR ddPTM_KYSE-520_SHP099_60min_R1 5 RSDSIKFQHR 10 2 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 RS(0.011)DS(0.989)IKFQHR;RS(0.001)DS(0.999)IKFQHR;RS(0.022)DS(0.978)IKFQHR;RS(0.013)DS(0.987)IKFQHR;RS(0.018)DS(0.982)IKFQHR 160.48 4.7571e-05 12085350000.0 6505490.0 7636710.0 8134160.0 7354110.0 7365310.0 5956470.0 6061600.0 6374620.0 8551920.0 5081728.0 True False 6144617.501327203 7269830.988664603 8658500.968716158 8053042.403306197 7944917.994118617 5919293.461289636 6674365.68351507 6352507.931067494 6999106.9043595325 5036707.843444557 1.2199670285273003 1.4433696006661434 1.7190794538510874 1.5988702647876432 1.577402986448617 1.1752306556739822 1.3251444973529642 1.261242090770759 1.389619394634752 1.0 22.264049618557735 -6.258340186089146 24.990644215864574 1.2525060282295433 1.5242993018403466 0.44870383608947517 0.15471632935109664 280.0795577907088 2258451.0496142274 0.05372240215047021 0.051561562485203265 5.516451622524212e-07 6.258340186089146 0.2717932736108033 RSDS(ph)LLSFR ddPTM_KYSE-520_SHP099_60min_R1 12 RSDSLLSFR 9 1 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 RSDS(0.951)LLS(0.049)FR;RS(0.007)DS(0.992)LLS(0.001)FR;RS(0.001)DS(0.999)LLSFR;RS(0.001)DS(0.999)LLSFR;RSDS(1)LLSFR;RSDS(1)LLSFR;RSDS(1)LLSFR;RSDS(1)LLSFR;RSDS(1)LLSFR;RS(0.017)DS(0.981)LLS(0.002)FR;RSDS(1)LLSFR;RSDS(0.99)LLS(0.009)FR 211.96 5.2779e-09 16637200000.0 8911009.0 7614731.0 8161852.0 7314629.0 8248354.0 7818944.0 6871177.0 7980587.0 10089467.0 8270441.0 True False 8416697.56711395 7248907.892815738 8687978.039344927 8009809.140936606 8897452.533085546 7770143.070205995 7565782.627385181 7952904.206380002 8257474.127565227 8197171.327045724 1.026780730975321 0.88431821217384 1.0598751316420383 0.9771430681836628 1.0854296168886108 0.9479054127573504 0.9229748074707991 0.9702010472978908 1.0073565377754812 1.0 22.966694720947412 -8.92072774304737 14.494039428321868 1.0000044388867646 0.9851117938797518 0.003750124003729982 0.057943807432826976 0.0 0.0 0.05530836694214726 0.013414249346052546 1.2002514987749618e-09 8.92072774304737 -0.014892645007012817 RSDS(ph)MTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNAR ddPTM_KYSE-520_SHP099_60min_R1 1 RSDSMTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNAR 38 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 RS(0.173)DS(0.769)MT(0.058)FLGCIPPNPFEVPLAEAIPLADQPHLLQPNAR 268.8 5.7966e-42 835100000.0 228690.0 284370.0 286460.0 224640.0 249660.0 272580.0 147280.0 167190.0 321840.0 192620.0 True False 216004.10981778745 270708.4383519277 304925.66995220515 245989.71805952117 269306.82162891404 270878.72711158276 162168.4997142834 166610.0569124395 263401.96892616776 190913.5366560922 1.1314237513021033 1.4179635613768782 1.597192505534545 1.288487565460809 1.4106219304607923 1.4188555293464509 0.8494342651375761 0.8726990229748218 1.3796924698988462 1.0 17.542559874581702 -6.748408473805266 24.99954396856056 1.0148480251783074 1.3867227962606639 0.4947749803644017 0.17395546259479117 185.1028445997628 355116.5455010028 0.06675652490286851 0.05138525971044272 1.7848080915937448e-07 6.748408473805266 0.37187477108235645 RSDS(ph)PEIPFQAAAGPSDGLDAS(ph)SPGNSFVGLR ddPTM_KYSE-520_SHP099_60min_R1 1 RSDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 32 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 RS(0.174)DS(0.826)PEIPFQAAAGPSDGLDAS(0.508)S(0.453)PGNS(0.039)FVGLR 107.03 0.00040903 287950000.0 155060.0 176990.0 166410.0 111470.0 126670.0 130010.0 106740.0 110040.0 153240.0 119070.0 True False 146458.5126955533 168487.13473259384 177137.054865414 122064.0752853224 136638.20834628903 129198.5593652391 117530.32088201109 109658.29692352898 125415.47886603881 118015.13243505823 1.2410146874693972 1.427673987700768 1.5009689961826682 1.0343086752242745 1.1578024404749854 1.0947626520381606 0.9958919543363312 0.9291884410151564 1.0627067586866699 1.0 16.848612334780615 -5.271605604631629 24.93206034351736 1.0417344946986435 1.3936646996025703 0.7884364666061627 0.08322351739562488 294.8344305349535 723063.3950879744 0.02491967304365526 0.03743849397274949 5.350500332323325e-06 5.271605604631629 0.3519302049039268 RSDS(ph)PEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_KYSE-520_SHP099_60min_R1 4 RSDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 32 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 RS(0.207)DS(0.793)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.07)DS(0.93)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.011)DS(0.989)PEIPFQAAAGPSDGLDASSPGNSFVGLR;RS(0.191)DS(0.809)PEIPFQAAAGPSDGLDASSPGNSFVGLR 240.07 2.9976999999999993e-31 3338320000.0 1768191.0 1982747.0 1546168.0 1083237.0 1222120.0 1290429.0 1098093.0 1188578.0 1684548.0 1445990.0 True False 1670105.9204286297 1887492.8579560774 1645836.4632362707 1186187.5187929203 1318293.8910883935 1282374.9539506675 1209098.956794926 1184455.1003341896 1378676.5471993454 1433179.653563197 1.1653151203175278 1.3169966886310163 1.148381125244391 0.8276614281006569 0.9198385476732296 0.8947761369360805 0.8436478663291391 0.8264526344547077 0.9619704994915711 1.0 20.45078803660684 -5.131649758917583 4.160974046959984 0.8883365114443734 1.2397836584991613 0.836078290995695 0.06428944183220188 0.07654876800933512 2.207359641744589 0.016819880873352604 0.030779647222421692 7.384995603199879e-06 5.131649758917583 0.35144714705478786 RSDS(ph)VSASER ddPTM_KYSE-520_SHP099_60min_R1 5 RSDSVSASER 10 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 RS(0.002)DS(0.958)VS(0.04)AS(0.001)ER;RS(0.002)DS(0.972)VS(0.023)AS(0.003)ER;RS(0.225)DS(0.763)VS(0.012)ASER;RS(0.007)DS(0.993)VSASER;RS(0.016)DS(0.983)VSASER 101.38 0.0012610999999999998 2007900000.0 744748.0 607106.0 654412.0 594379.0 594202.0 731546.0 647351.0 673416.0 832376.0 684835.0 True False 703435.3438216689 577939.7164753162 696596.4446162211 650868.6014534372 640962.3168530962 726980.1500607891 712791.5566169273 671080.0770724756 681237.5008913991 678767.894693568 1.0363415083726626 0.8514541141287023 1.0262660477344792 0.958897152534408 0.9443026428680172 1.0710290745100528 1.0501256205388432 0.9886738638035273 1.00363836624734 1.0 19.372558802337764 -6.242646374476972 24.950014851795736 1.0237000193074681 0.9604667590921524 0.24174938922163758 0.05231000834841774 1122.0275384545916 1489629.8515833786 0.016746776229469768 0.016718756900052253 5.719441542837669e-07 6.242646374476972 -0.06323326021531572 RSDSMT(ph)FLGCIPPNPFEVPLAEAIPLADQPHLLQPNAR ddPTM_KYSE-520_SHP099_60min_R1 1 RSDSMTFLGCIPPNPFEVPLAEAIPLADQPHLLQPNAR 38 1 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 RS(0.021)DS(0.447)MT(0.533)FLGCIPPNPFEVPLAEAIPLADQPHLLQPNAR 96.23899999999999 0.00034273 64385000.0 13317.0 22043.0 20256.0 15020.0 15226.0 17330.0 15825.0 18888.0 21503.0 18308.0 True False 12578.279463218658 20984.021192782442 21561.734170745924 16447.49628407233 16424.199575910618 17221.837041762898 17424.745437116595 18822.481936492346 17598.59724651808 18145.805363408468 0.6931783523140348 1.156411676006253 1.1882489500425135 0.9064076217437653 0.9051237598431692 0.9490808865662816 0.9602629967724711 1.0372910741370793 0.9698438230802447 1.0 14.147348468772925 -7.229843054214743 24.122646724179088 1.0026756687050158 0.976208298087315 0.011880879025732205 0.1306671569041191 3781.7152321244794 2887205.3818383436 0.06336206025770821 0.03657373452538418 5.8905649073466253e-08 7.229843054214743 -0.02646737061770077 RSEAS(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 2 RSEASKR 7 2 Q12923-3;Q12923;Q12923-4;Q12923-2 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 RSEAS(1)KR;RSEAS(1)KR 94.662 0.0048576999999999995 1106810000.0 142754.0 143611.0 144440.0 133143.0 121621.0 144760.0 149962.0 142178.0 174602.0 113261.0 True False 134835.15104695637 136711.71199549417 153750.83351217117 145796.87068909736 131191.88077116935 143856.4991440043 165121.6224480807 141684.81770259456 142898.67815823623 112257.5956557246 1.2011227414889 1.2178393025160301 1.3696252143480736 1.2987706518873978 1.168668186814842 1.281485660758211 1.4709171480429823 1.262140141831635 1.2729533117427774 1.0 16.776453539395273 -8.481198282299523 2.4720005233012716 1.000009189770704 1.2866865331024566 0.5157051001235162 0.08219656994621363 6.347089470193442 31.440671748750084 0.08327043967135937 0.022513535774745252 3.3021874132964777e-09 8.481198282299523 0.28667734333175265 RSECNMCNT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 RSECNMCNTPK 11 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 RSECNMCNT(1)PK 100.73 0.0014716 0.0 207280.0 204930.0 177120.0 164570.0 166720.0 158700.0 144560.0 186160.0 222210.0 159450.0 True False 195781.7651975643 195084.85519379895 188537.4386020199 180210.6833202255 179839.91549296034 157709.4944332239 159173.5355696414 185514.2544100706 181862.26545825173 158037.3970502228 1.23883187683322 1.2344220977760272 1.1929925582240795 1.1403040462818825 1.13795796975705 0.9979251580757517 1.0071890485456272 1.1738630088365472 1.150754624239082 1.0 17.26990646419925 -5.41059403266722 1.3739129314138645 1.0760300565639713 1.2373850005409162 0.5624121706741038 0.05864695558837077 0.3699603546464064 1.3865355194721576 0.022288505058505912 0.045156054842120534 3.885133686247919e-06 5.41059403266722 0.16135494397694483 RSEDES(ph)ET(ph)EDEEEKSQEDQEQKR ddPTM_KYSE-520_SHP099_60min_R1 1 RSEDESETEDEEEKSQEDQEQKR 23 3 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 RS(0.04)EDES(0.983)ET(0.977)EDEEEKSQEDQEQKR 106.51 0.0021323 104350000.0 44368.0 43188.0 40362.0 47351.0 42167.0 38935.0 39514.0 39982.0 46095.0 41861.0 True False 41906.81859458475 41113.18365349037 42963.79910148337 51851.22480340273 45485.30300258918 38691.99222279507 43508.46073947714 39843.31177386894 37725.30996038931 41490.144107365195 1.010042734152509 0.9909144578312538 1.035518194159672 1.2497239023616278 1.0962917575047606 0.9325586366408062 1.0486456886456959 0.9603078666288866 0.9092595548178016 1.0 15.340481047668149 -6.253822747527684 24.81194327179313 0.9725792994723844 1.0790905418858503 0.33438691790537944 0.0749349198761445 717.0224724715879 2335772.235240722 0.027389100246388028 0.026886317574056764 5.574132045244266e-07 6.253822747527684 0.10651124241346588 RSEEHS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 RSEEHSPPR 9 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(0.007)EEHS(0.993)PPR 56.122 0.034010000000000006 73653000.0 24870.0 30847.0 26043.0 33210.0 23685.0 32649.0 17676.0 19132.0 27270.0 21206.0 True False 23490.41152288412 29365.063817709044 27721.773450273282 36366.26841504943 25548.87475078436 32445.22548046838 19462.862581135756 19065.635557442376 22318.45542075748 21018.13133801835 1.1176260698492173 1.397130094272104 1.3189456762090521 1.730233189154586 1.215563569372632 1.5436779301964059 0.9260034713899914 0.907104216394146 1.0618667788219145 1.0 14.359346788658614 -6.770728303642782 24.99997189845607 0.9660021922462843 1.3923364634449054 0.6076735786505673 0.16267051493095558 131.50837552751756 353934.7538772473 0.06601125452503494 0.04518967611810604 1.6953981165564656e-07 6.770728303642782 0.4263342711986211 RSES(ph)GLLARPPR ddPTM_KYSE-520_SHP099_60min_R1 3 RSESGLLARPPR 12 2 E7ESL9 E7ESL9 AGAP3 1 RS(0.007)ES(0.993)GLLARPPR;RS(0.005)ES(0.995)GLLARPPR;RS(0.054)ES(0.946)GLLARPPR 93.42399999999999 0.0017589000000000003 1905300000.0 834800.0 866420.0 788540.0 719490.0 794650.0 707110.0 656150.0 746520.0 865270.0 723340.0 True False 788491.9798674575 824795.8826770666 839370.55010861 787870.1132774431 857184.4340599882 702696.6642008633 722480.0454068914 743930.4963590776 708158.779681658 716931.7703500038 1.0998145325356667 1.1504524095429665 1.1707816347695568 1.0989471325741462 1.1956290256763393 0.980144406012038 1.0077389164301909 1.0376587105295851 0.9877631442332889 1.0 19.451476300112247 -6.26858912221436 24.970952695072317 1.0053320676441742 1.1426141887381547 0.8394546554167148 0.03070238597481099 209.23160036881234 730753.5292294613 0.010303550374731426 0.009276824678354383 5.387792703353756e-07 6.26858912221436 0.13728212109398052 RSES(ph)PPAELPSLR ddPTM_KYSE-520_SHP099_60min_R1 3 RSESPPAELPSLR 13 1 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 RS(0.042)ES(0.958)PPAELPSLR;RS(0.316)ES(0.684)PPAELPSLR;RS(0.004)ES(0.996)PPAELPSLR 160.43 7.2756e-07 1059600000.0 655290.0 643110.0 599360.0 509890.0 552830.0 595640.0 540120.0 573300.0 691580.0 617000.0 True False 618939.7574117711 612214.0302722093 637995.7046099062 558349.7922959819 596334.5758275747 591922.3898185602 594720.6006632181 571311.3561092259 566006.5053130711 611533.8600187361 1.0121103635910007 1.001112236456461 1.0432712664354502 0.9130316876957152 0.9751456375764774 0.967930687926953 0.9725064130463635 0.9342268571877967 0.9255521931291423 1.0 19.222072855983768 -5.252568376379095 24.97568405334345 0.9547912506342573 1.0170593837549886 0.5482822401402239 0.0263289790278753 488.03266279630924 1374018.1116486862 0.007079382743327303 0.01203375674753731 5.5902550630677565e-06 5.252568376379095 0.06226813312073132 RSES(ph)YSEDKCDMDSTNMDSNLKPEEVVHK ddPTM_KYSE-520_SHP099_60min_R1 1 RSESYSEDKCDMDSTNMDSNLKPEEVVHK 29 3 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RS(0.119)ES(0.617)YS(0.26)EDKCDMDS(0.001)T(0.002)NMDSNLKPEEVVHK 168.48 2.3696000000000003e-10 1060000000.0 261320.0 224890.0 265010.0 300500.0 260750.0 262340.0 313000.0 441550.0 466190.0 270860.0 True False 246824.05867149483 214085.946833228 282092.9686309922 329059.42965138075 281269.5415354454 260702.6387499181 344641.09458562423 440018.36610854446 381541.6476935437 268460.3911258912 0.9194058670493024 0.7974582244158135 1.050780591684038 1.225728042305773 1.0477133716293645 0.9711028046132317 1.283768876072333 1.639043898666613 1.4212213805299287 1.0 18.03434972189686 -6.882432877321021 4.3278704946271835 1.4083979507990803 1.0076820282501742 0.443213100984723 0.18071729078122137 0.1832929950718516 6.015941414846323 0.07999357014422007 0.052794689732935884 1.3108926326122024e-07 6.882432877321021 -0.4007159225489061 RSET(ph)PPHWR ddPTM_KYSE-520_SHP099_60min_R1 7 RSETPPHWR 9 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 RS(0.087)ET(0.913)PPHWR;RS(0.316)ET(0.684)PPHWR;RS(0.03)ET(0.97)PPHWR;RS(0.036)ET(0.964)PPHWR;RS(0.003)ET(0.997)PPHWR;RS(0.028)ET(0.972)PPHWR;RS(0.023)ET(0.977)PPHWR 113.24 0.0015857000000000002 19094180000.0 1798580.0 1572910.0 1555810.0 1519340.0 1605540.0 1632700.0 1635290.0 1638390.0 1793190.0 1462630.0 True False 1698809.182019661 1497345.0426139566 1656100.0019840146 1663737.616793772 1731886.863727014 1622509.7136806874 1800601.0720924095 1632706.8074931009 1467591.898641295 1449672.236108921 1.171857430738586 1.0328852311009242 1.142396164273083 1.147664675747275 1.1946747827464697 1.119225210545303 1.242074606412702 1.1262592790460446 1.01236118212519 1.0 20.46729532005247 -7.744118924401616 4.40628863177505 1.0011475456002712 1.148084781363547 0.5557574314852474 0.0507770393716789 0.14741561506573586 6.483079958865916 0.04389562684862523 0.01336718036062122 1.8025240816963322e-08 7.744118924401616 0.1469372357632759 RSFS(ph)KEVEER ddPTM_KYSE-520_SHP099_60min_R1 2 RSFSKEVEER 10 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 RS(0.032)FS(0.968)KEVEER;RS(0.019)FS(0.981)KEVEER 135.91 0.00017523 2198420000.0 2533700.0 2255700.0 2204800.0 1839850.0 2011480.0 1923390.0 1638630.0 1751210.0 2744500.0 1689240.0 True False 2393150.610194268 2147332.7861252734 2346924.9358047275 2014708.7908289263 2169772.032244362 1911385.4095647074 1804278.71188767 1745135.461245487 2246167.983214849 1674274.647808832 1.4293656141340063 1.2825451242038128 1.4017562404568515 1.203332316753186 1.2959474928943113 1.14161999171772 1.077647991773021 1.042323291181284 1.341576775443903 1.0 20.675104776143737 -5.785439857188937 0.8970487339600836 1.1128794988097375 1.3773419867887144 0.522025567145189 0.09969896838123365 0.49508126620572535 0.8630029039798675 0.04909431820769073 0.0774494649664929 1.6389290109169787e-06 5.785439857188937 0.264462487978977 RSFSS(ph)QRPVDR ddPTM_KYSE-520_SHP099_60min_R1 2 RSFSSQRPVDR 11 2 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 RS(0.106)FS(0.106)S(0.787)QRPVDR;RS(0.069)FS(0.069)S(0.863)QRPVDR 71.87899999999999 0.016489 2423020000.0 920870.0 953760.0 879130.0 861000.0 822190.0 726290.0 807700.0 821820.0 976690.0 877860.0 True False 869787.5053911656 907939.9379770529 935800.1264577347 942829.1811309104 886891.6753788214 721756.9547064033 889350.198392358 818969.2982342308 799347.7163512883 870082.8433647461 0.9996605633867709 1.043509758755738 1.0755299148743696 1.0836085187990179 1.0193186570017552 0.8295267056585746 1.0221442764611954 0.9412543925899617 0.9187029975905351 1.0 19.730793245537807 -6.015438080499772 24.570927381270696 0.94150716818661 1.0518058326189819 0.49479492735250985 0.05229308707327529 456.2664383585648 726184.1089809561 0.016504538257672282 0.017031790915183042 9.65076897756942e-07 6.015438080499772 0.1102986644323719 RSGKNS(ph)QEDS(ph)EDS(ph)EDKDVK ddPTM_KYSE-520_SHP099_60min_R1 5 RSGKNSQEDSEDSEDKDVK 19 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 RS(0.067)GKNS(0.938)QEDS(0.999)EDS(0.997)EDKDVK;RS(0.106)GKNS(0.917)QEDS(0.977)EDS(1)EDKDVK;RS(0.131)GKNS(0.898)QEDS(0.971)EDS(1)EDKDVK;RS(0.198)GKNS(0.901)QEDS(0.901)EDS(1)EDKDVK;RS(0.206)GKNS(0.886)QEDS(0.928)EDS(0.98)EDKDVK 127.38 1.0907e-05 10862300000.0 10637010.0 9764120.0 9001350.0 8480360.0 9065570.0 9102250.0 8404730.0 9245670.0 11767740.0 8324670.0 True False 10046953.85094626 9295037.018957075 9581591.423669213 9286330.864686804 9778978.78296255 9045439.481441788 9254362.130660158 9213598.92872559 9631015.056584701 8250919.900295248 1.2176768132952962 1.1265455405311187 1.1612755352680553 1.12549036675953 1.185198608292467 1.0962946666247613 1.1216158007216872 1.116675357422376 1.1672656107399695 1.0 22.97612354463532 -13.999999999995474 0.18310402987658084 0.41414480715961777 1.171782377329623 0.6403204306302333 0.03359822250208682 84.48345045420434 0.8174953311012596 18.066134671127195 0.09697858037595396 1.0000000000104218e-14 13.999999999995474 0.7576375701700052 RSGKNS(ph)QEDS(ph)EDSEDKDVK ddPTM_KYSE-520_SHP099_60min_R1 3 RSGKNSQEDSEDSEDKDVK 19 3 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 RS(0.099)GKNS(0.899)QEDS(0.953)EDS(0.049)EDKDVK;RS(0.088)GKNS(0.912)QEDS(0.924)EDS(0.076)EDKDVK;RS(0.238)GKNS(0.762)QEDS(1)EDSEDKDVK 163.71 2.5469999999999996e-08 3839050000.0 1786840.0 1678350.0 1501480.0 1423340.0 1484510.0 1586320.0 1419680.0 1435930.0 1929540.0 1284570.0 True False 1687720.4232227695 1597719.5467452896 1598267.8032529398 1558613.8056572236 1601332.4912935153 1576419.1884644718 1563195.109141591 1430949.0939785796 1579184.1757450807 1273189.709180336 1.3255844050996166 1.2548951151779901 1.2553257316868238 1.224180335749525 1.2577328262607728 1.2381651980829718 1.2277786239318231 1.123908780962271 1.2403368990169896 1.0 20.280015970576137 -13.999999999780606 0.12801304166544616 0.19206070031920658 1.3401932611231198 0.8221625262963144 0.03608525842969763 55.647439678491075 0.4512633051470409 11.473268086027163 0.2761715027419995 1.000000000505174e-14 13.999999999780606 1.1481325608039132 RSIS(ph)QQK ddPTM_KYSE-520_SHP099_60min_R1 4 RSISQQK 7 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 RS(0.023)IS(0.977)QQK;RSIS(1)QQK;RS(0.076)IS(0.924)QQK;RSIS(1)QQK 92.538 0.0045053 2209910000.0 3092040.0 2472750.0 2164100.0 2365660.0 2755290.0 2861200.0 2749120.0 2177910.0 3092250.0 3446800.0 True False 2920518.3773710737 2353955.3783265804 2303601.3486824264 2590491.6151383864 2972115.6475443803 2843342.18949175 3027027.878425657 2170355.338538015 2530775.3492789613 3416264.033569819 0.8548866096626856 0.6890437493107987 0.674304247577516 0.7582820267060731 0.8699900295583048 0.8322957949244353 0.8860637962056375 0.6353008190265979 0.7408020353258329 1.0 21.70398805048905 -5.536018475799881 23.140012456036434 0.8125132178263159 0.7313611494788836 0.13208028551320117 0.10055219293583532 209.02244974186863 368099.45838936977 0.03014651068027083 0.03895232375652994 2.910593292677776e-06 5.536018475799881 -0.08115206834743227 RSIS(ph)SPNVNR ddPTM_KYSE-520_SHP099_60min_R1 3 RSISSPNVNR 10 1 Q9NQT8 Q9NQT8 KIF13B Kinesin-like protein KIF13B 1 RS(0.209)IS(0.69)S(0.101)PNVNR;RS(0.04)IS(0.836)S(0.124)PNVNR;RS(0.069)IS(0.824)S(0.107)PNVNR 150.56 0.00016154 1540150000.0 1802020.0 1755610.0 1683550.0 1549850.0 1649340.0 1486810.0 1449780.0 1513930.0 2188860.0 1677860.0 True False 1702058.3583621914 1671267.8603756654 1792074.3267752414 1697147.2780206082 1779133.6745391053 1477530.267285834 1596337.910889283 1508678.530183918 1791418.2006703045 1662995.465755329 1.0234894763162328 1.004974393972012 1.0776182880097542 1.0205363231401041 1.0698367561279107 0.8884752230005287 0.9599171758199773 0.9072054381691771 1.077223743274998 1.0 20.66535280437075 -6.241472257091368 24.983715438342063 0.9603492015557306 1.0384719295052445 0.32217324213311416 0.052351312720034196 920.2516977972616 1151458.9653044096 0.016701018793630094 0.01668212294365963 5.734925003106827e-07 6.241472257091368 0.07812272794951391 RSKS(ph)EDMDNVQSK ddPTM_KYSE-520_SHP099_60min_R1 1 RSKSEDMDNVQSK 13 2 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 RS(0.129)KS(0.87)EDMDNVQS(0.001)K 119.62 7.9047e-05 338880000.0 285580.0 278700.0 262650.0 270670.0 272620.0 284320.0 279560.0 309170.0 412730.0 274320.0 True False 269738.30811038427 265310.8336627715 279580.83925485826 296394.39542009693 294073.64300438424 282545.45341685123 307820.6530426744 308097.5614308202 337788.6360766131 271889.7382177303 0.9920871228114422 0.9758030420784385 1.0282875738067352 1.090127186715459 1.0815915485890424 1.0391913106723718 1.1321525227854332 1.1331709811868462 1.2423736117841664 1.0 18.05266217599526 -5.282493841729781 0.6340738313430995 1.1297117719425456 0.9557413159206132 0.39425978118850624 0.06059518943874083 1.221619032912251 0.8237261906976525 0.03564283000514071 0.1319494743954861 5.218025033153609e-06 5.282493841729781 -0.1739704560219324 RSLS(ph)GSSPCPK ddPTM_KYSE-520_SHP099_60min_R1 1 RSLSGSSPCPK 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RS(0.209)LS(0.53)GS(0.036)S(0.225)PCPK 93.46799999999999 0.002663 617330000.0 1125000.0 1010600.0 987990.0 926870.0 890140.0 824740.0 710640.0 608070.0 940080.0 696070.0 True False 1062594.0073680996 962049.2590584751 1051677.4162398935 1014959.446126374 960188.9537962078 819592.4917382313 782478.4263780443 605960.747094605 769385.1694882918 689903.3613342659 1.540207030319513 1.3944695923757813 1.5243836675994162 1.4711617641106327 1.3917731201355685 1.1879815894115198 1.1341855544300279 0.8783269962950799 1.115207161768728 1.0 19.396034764026112 -6.44298001869093 1.3611237760409292 0.9996083944901799 1.484439366046753 0.89854910272521 0.07004136619549772 0.11687322100813799 0.4388393128715822 0.03412751525458982 0.026449915553725112 3.6059523314506186e-07 6.44298001869093 0.48483097155657306 RSLS(ph)PILPGR ddPTM_KYSE-520_SHP099_60min_R1 2 RSLSPILPGR 10 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 RS(0.249)LS(0.751)PILPGR;RS(0.019)LS(0.981)PILPGR 107.65 0.00063679 463750000.0 302255.0 296817.0 254583.0 237627.0 321423.0 301773.0 239704.0 276039.0 305438.0 289357.0 True False 285488.31261959585 282557.4657885998 270993.8275272019 260210.99863483763 346717.1614532984 299889.5227699891 263935.6196055984 275081.48513698723 249978.15866539514 286793.52209633985 0.9954489576082352 0.9852295955753245 0.9449091651246205 0.9073112835073988 1.2089434897934306 1.045663516309305 0.9202984003137177 0.9591621286501084 0.8716311192741039 1.0 18.12965291219688 -6.76922345434722 24.990192489195366 0.9343697420725063 1.01404143557496 0.17750533501097 0.08086365268428977 338.2986596287676 1086071.5230721547 0.035636680671632164 0.024527765374269803 1.7012829345610104e-07 6.76922345434722 0.07967169350245373 RSLSGSS(ph)PCPK ddPTM_KYSE-520_SHP099_60min_R1 1 RSLSGSSPCPK 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RS(0.043)LS(0.061)GS(0.338)S(0.557)PCPK 65.895 0.031812 439110000.0 663460.0 618190.0 532180.0 519030.0 559470.0 493940.0 416330.0 410960.0 592240.0 465410.0 True False 626656.5512252797 588491.2244778923 566485.174318107 568358.4551479399 603497.106051143 490857.13724225975 458416.6993892426 409534.4756787855 484704.14515546063 461286.8294835004 1.3584965170736452 1.2757598675358275 1.2280540828629258 1.232115072056852 1.3082903466523734 1.064103949795985 0.9937779925399747 0.8878087330985329 1.0507651946147702 1.0 18.815304576053272 -6.417793091951236 2.9943737034335234 0.9756694675808131 1.2754474607472852 0.8796173111932106 0.05250903162948992 0.08745633554475694 1.5074097590999176 0.020650096784687093 0.01747427036409726 3.821262813774526e-07 6.417793091951236 0.29977799316647213 RSMS(ph)FQGIR ddPTM_KYSE-520_SHP099_60min_R1 2 RSMSFQGIR 9 1 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 RS(0.145)MS(0.855)FQGIR;RS(0.056)MS(0.944)FQGIR 110.38 0.00057852 259740000.0 198178.0 158369.0 156175.0 116360.0 136793.0 137718.0 106776.0 127962.0 164169.0 146498.0 True False 187184.67128195145 150760.71552328469 166242.290388835 127418.81941509017 147557.830854298 136858.45087810158 117569.96011333742 127518.12968855517 134360.04796370864 145200.14169371952 1.289149370644505 1.0382959256423763 1.1449182380241827 0.8775392222678633 1.0162375128087113 0.9425503947977294 0.8097096789432595 0.8782231766518368 0.9253437799470153 1.0 17.14768333562672 -3.032587338155583 0.5175033541768677 0.8982875094548504 2.4239592460757016 0.6840944622334834 0.07554162782807569 7.596242963529726 0.5854135204319075 0.04037313583484465 9.26254756918958 0.0009277109054239113 3.032587338155583 1.5256717366208512 RSNATNSSYS(ph)PTTGR ddPTM_KYSE-520_SHP099_60min_R1 1 RSNATNSSYSPTTGR 15 1 Q13009-2;Q13009 Q13009-2 TIAM1 T-lymphoma invasion and metastasis-inducing protein 1 1 RS(0.001)NAT(0.001)NS(0.022)S(0.212)Y(0.002)S(0.694)PT(0.067)T(0.002)GR 52.86600000000001 0.048086000000000004 0.0 50244.0 48580.0 52681.0 44235.0 42960.0 44920.0 46844.0 55542.0 59938.0 44827.0 True False 47456.86516106919 46246.14387993339 56076.90155258025 48439.081100262265 46340.70759103634 44639.63761777203 51579.44867338328 55349.33776560028 49054.77011402132 44429.867654878275 1.06812978894522 1.0408796226710275 1.262144240180359 1.0902368982173591 1.0430080042326721 1.0047213726703668 1.1609183505573644 1.24576868415504 1.1040944459944895 1.0 15.439242223487167 RSNRNS(ph)IER ddPTM_KYSE-520_SHP099_60min_R1 6 RSNRNSIER 9 2 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 RSNRNS(1)IER;RS(0.09)NRNS(0.91)IER;RS(0.07)NRNS(0.93)IER;RS(0.147)NRNS(0.853)IER;RS(0.033)NRNS(0.967)IER;RS(0.035)NRNS(0.965)IER 90.79299999999999 0.0025074000000000003 2477369000.0 1569997.0 1324943.0 1217834.0 1047731.0 1339289.0 1313270.0 975712.0 1032007.0 1549993.0 1066743.0 True False 1482906.136698573 1261290.7495000104 1296337.528243295 1147307.0392281879 1444683.4247879784 1305073.3947972283 1074346.4909914637 1028427.2085892452 1268553.3433438265 1057292.486933495 1.4025505288508209 1.1929440198314274 1.2260916863252393 1.085136850405289 1.3663990264208232 1.2343541743897013 1.0161298829498269 0.9726988712196671 1.1998130687782143 1.0 20.0119431050578 -6.7539223600741325 23.11617787846654 1.044885346876754 1.2451364836911274 0.4984399989480276 0.10017072704783707 57.81063881271728 177779.0585740753 0.03839516330022234 0.02907772005621606 1.762291067495403e-07 6.7539223600741325 0.20025113681437334 RSNS(ph)PDKFK ddPTM_KYSE-520_SHP099_60min_R1 3 RSNSPDKFK 9 2 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 RS(0.135)NS(0.865)PDKFK;RS(0.15)NS(0.85)PDKFK;RS(0.063)NS(0.937)PDKFK 107.09 0.00084392 15706300000.0 13544500.0 11934100.0 11188920.0 11102810.0 11605500.0 11079600.0 10940100.0 11750400.0 12856300.0 10409700.0 True False 12793159.584708648 11360767.922550691 11910175.686104964 12158017.724218458 12518786.823737735 11010448.106631065 12046032.073086862 11709640.604963977 10521920.000949197 10317478.156624056 1.2399502466109074 1.1011186793990757 1.15436887825717 1.1783904496480793 1.2133572403737427 1.0671646636404173 1.1675364745359829 1.134932434768095 1.0198150983429883 1.0 23.298587048196076 -7.757460610020012 3.3538808938367035 0.999574433477523 1.1568176920041626 0.6179672743464024 0.04673611781055189 0.1517588530936001 3.301817039822683 0.041173320230791864 0.011794935376541306 1.747991795953335e-08 7.757460610020012 0.15724325852663967 RSNS(ph)TTQVSQPR ddPTM_KYSE-520_SHP099_60min_R1 1 RSNSTTQVSQPR 12 1 I3L2J8;Q9UPN4-3;Q9UPN4-2;Q9UPN4 I3L2J8 CEP131 Centrosomal protein of 131 kDa 1 RS(0.292)NS(0.69)T(0.017)T(0.001)QVSQPR 112.63 0.00011106 486970000.0 91354.0 107080.0 77768.0 81057.0 94843.0 69431.0 71220.0 87706.0 108820.0 93461.0 True False 86286.41151031587 101935.71606964308 82781.04971319952 88760.63290932428 102306.6045171476 68997.65537487819 78419.61264021769 87401.76835673439 89061.03112896321 92633.00825155771 0.9314866605216277 1.1004254098368758 0.8936452704676952 0.9581965930360649 1.1044292574340229 0.7448495593223696 0.8465623012831281 0.9435272588728074 0.96143947832403 1.0 16.499238745339177 -6.247751416979639 24.98279873618052 0.8924515737612594 0.9953787024904535 0.22681998820179794 0.09031508560731875 1201.833360535159 2193546.624912308 0.03012599721840556 0.029975923994818222 5.652604280082714e-07 6.247751416979639 0.10292712872919407 RSNVSSPATPTASSSSST(ph)TPTRK ddPTM_KYSE-520_SHP099_60min_R1 1 RSNVSSPATPTASSSSSTTPTRK 23 2 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 RSNVSSPATPTASSS(0.001)S(0.003)S(0.101)T(0.546)T(0.331)PT(0.017)RK 156.52 8.7537e-08 756270000.0 236740.0 295300.0 164860.0 173540.0 163640.0 220610.0 178180.0 203670.0 298580.0 272400.0 True False 223607.56027051012 281113.3447456636 175487.13938532653 190033.18942329648 176517.53701576332 219233.09115887573 196192.1732692217 202963.51630693526 244365.398589284 269986.74792399304 0.8282167994906934 1.0412116405980152 0.6499842704677115 0.7038611742410218 0.6538007453071613 0.8120142667913258 0.7266733451837938 0.7517536244559446 0.9051014557872967 1.0 18.04252906995906 -7.941487817542699 3.4559240406193226 0.99854113787698 0.7697860118259808 0.3336516916385984 0.10657932733146402 0.2551295665866282 6.348225360450673 0.1088246981828539 0.028927386208669328 1.1442269762431535e-08 7.941487817542699 -0.22875512605099912 RSNVSSPATPTASSSSSTT(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 RSNVSSPATPTASSSSSTTPTR 22 1 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 RSNVSSPATPTASSSSS(0.009)T(0.014)T(0.969)PT(0.009)R;RSNVSSPATPTAS(0.001)S(0.002)S(0.007)S(0.007)S(0.033)T(0.18)T(0.736)PT(0.033)R 164.2 2.8441e-09 0.0 334680.0 287810.0 253040.0 243170.0 259190.0 335280.0 249530.0 297850.0 321700.0 267290.0 True False 316114.6332319608 273983.17558838276 269351.3632783149 266280.8036882736 279586.7784106309 333187.3931541992 274754.9275781171 296816.82786871237 263287.3893970546 264922.01854847337 1.1932365416962147 1.0342031103701992 1.0167194284344887 1.0051290004026283 1.0553550057579464 1.2576810148879156 1.0371162392749345 1.1203931990817257 0.99382977239727 1.0 18.015208230302 -7.774771885214232 24.456837691543555 0.9969147553982652 1.0855234792246515 0.18699162990234253 0.07717493612336718 372.82515138979363 683874.2662680567 0.0746789604372639 0.019758853689433073 1.6796860477777788e-08 7.774771885214232 0.0886087238263863 RSNVSSPATPTASSSSSTT(ph)PTRK ddPTM_KYSE-520_SHP099_60min_R1 1 RSNVSSPATPTASSSSSTTPTRK 23 2 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 RSNVSSPATPT(0.008)AS(0.006)S(0.013)S(0.01)S(0.019)S(0.067)T(0.176)T(0.676)PT(0.026)RK 81.345 0.0059365 631090000.0 107740.0 135440.0 88457.0 93044.0 87334.0 107930.0 85282.0 115890.0 139610.0 116790.0 True False 101763.44742563485 128933.25910041545 94159.07975620414 101886.87378530123 94206.68893751336 107256.36883539925 93903.13683211236 115488.00463892927 114260.34328169974 115755.33146124496 0.8791253598518302 1.1138429433255304 0.8134319047561859 0.8801916291813573 0.8138431962337207 0.926578218743288 0.8112208366277389 0.9976905873885801 0.9870849302518239 1.0 16.820719117128064 -7.301203698287855 24.25879753570006 0.9942909115787147 0.8947149975907808 0.24415689273158625 0.0834870242380325 605.8540675558623 369606.30270024156 0.046456484644683334 0.0223175963278429 4.9980005745151023e-08 7.301203698287855 -0.09957591398793397 RSPES(ph)CSKPEK ddPTM_KYSE-520_SHP099_60min_R1 5 RSPESCSKPEK 11 2 Q03111 Q03111 MLLT1 Protein ENL 1 RS(0.051)PES(0.882)CS(0.067)KPEK;RS(0.021)PES(0.973)CS(0.006)KPEK;RSPES(0.998)CS(0.002)KPEK;RS(0.377)PES(0.446)CS(0.177)KPEK;RS(0.153)PES(0.845)CS(0.002)KPEK 206.66 7.063600000000001e-07 50613800000.0 15994840.0 14355740.0 14185070.0 15048050.0 13912100.0 13301910.0 13983400.0 14634570.0 17299190.0 13679400.0 True False 15107574.340276953 13666068.701994948 15099462.309114464 16478212.1476388 15006903.120978994 13218887.845597027 15396978.536832621 14583806.092404328 14158093.1730918 13558211.15841215 1.1142748968696734 1.0079551455809772 1.1136765855535484 1.215367717400901 1.106849786128903 0.9749728552793198 1.1356202051241557 1.0756438236585402 1.044244923439436 1.0 23.69266350912165 -6.039098996045789 24.974964025794826 1.054696218981017 1.1123545575341316 0.21493424535997274 0.06161217260227109 1035.21490554216 661254.141325413 0.021368954672710286 0.021373894695166117 9.139048960111223e-07 6.039098996045789 0.05765833855311464 RSPGPGPSQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 RSPGPGPSQSPR 12 1 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 RS(0.049)PGPGPS(0.021)QS(0.93)PR;RS(0.036)PGPGPS(0.036)QS(0.929)PR 88.95100000000001 0.0019044 1134050000.0 590330.0 576090.0 549740.0 503530.0 566380.0 528660.0 468550.0 460640.0 588410.0 509270.0 True False 557583.2181063206 548413.7716712805 585177.1200150999 551385.3398081859 610950.8837386221 525360.4368435297 515915.6066073288 459042.1473541837 481569.57660901773 504758.264006064 1.1046539658033652 1.086487950328421 1.1593215242694268 1.0923750617415584 1.21038312258575 1.0408159198305236 1.0221043287388967 0.909429681667716 0.9540598162514331 1.0 18.94523310028671 -6.727762460303685 2.1567431950142115 0.9529643840563824 1.1269076593154075 0.7455323134880133 0.0438263186082631 0.1461486311592677 1.3916560144089292 0.020414930041972253 0.013580029105673444 1.8717055998641216e-07 6.727762460303685 0.1739432752590251 RSPGS(ph)PVCR ddPTM_KYSE-520_SHP099_60min_R1 3 RSPGSPVCR 9 1 Q86VQ1;H7C2L5;H7C0Q2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 RS(0.003)PGS(0.997)PVCR;RS(0.045)PGS(0.955)PVCR;RS(0.001)PGS(0.999)PVCR 86.803 0.0030500999999999996 1147080000.0 243119.0 231454.0 227918.0 182845.0 243665.0 209745.0 192720.0 182090.0 248203.0 230336.0 True False 229632.7044242888 220334.60242046302 242609.95896169342 200222.53382564642 262840.0492357977 208435.9036540429 212202.0183659469 181458.37229012552 203135.59188845856 228295.40223869632 1.0058577709952925 0.9651293905169855 1.0627019054375453 0.8770327035158682 1.1513155615853488 0.913009642814054 0.929506316312394 0.7948402399291427 0.8897927417568765 1.0 17.80054227909699 -6.4970892654411605 24.901509308791997 0.8914124022647721 1.0077650680101502 0.3006256056524782 0.0806897817096638 811.9690664850303 784013.1398604919 0.027145805150585088 0.023848743618270645 3.1835431049675407e-07 6.4970892654411605 0.11635266574537806 RSPQQTVPYVVPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 RSPQQTVPYVVPLSPK 16 1 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 RSPQQTVPYVVPLS(1)PK;RSPQQTVPY(0.001)VVPLS(0.999)PK;RSPQQTVPYVVPLS(1)PK;RSPQQTVPYVVPLS(1)PK 223.65 6.9233e-15 2723980000.0 2225810.0 2156530.0 1920270.0 1795380.0 1998010.0 2055390.0 1891010.0 2126560.0 2573830.0 2159450.0 True False 2102339.882257768 2052927.0617824784 2044053.6767406352 1966012.3753993213 2155242.0198781765 2042561.5486017913 2082171.745279108 2119183.4597028363 2106487.352974265 2140318.9530266766 0.9822554153832066 0.9591687532736113 0.9550229295732253 0.9185604662422561 1.0069723565407842 0.954325777339567 0.9728324567395241 0.9901250730439255 0.9841931969977794 1.0 21.029394374203843 -7.2364348583230305 0.7401690728790716 0.9985110145151279 0.9591809086183544 0.26903169244643066 0.02130558438188831 0.8943639415248458 0.9327873829170666 0.01965666147575342 0.009404009026018212 5.801831901414452e-08 7.2364348583230305 -0.03933010589677355 RSPS(ph)PAPPPR ddPTM_KYSE-520_SHP099_60min_R1 1 RSPSPAPPPR 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RS(0.149)PS(0.851)PAPPPR 52.863 0.044004 771640000.0 353010.0 358870.0 284530.0 384050.0 351890.0 318670.0 264010.0 367480.0 516500.0 313750.0 True False 333427.8315920113 341629.3465251483 302871.25906409655 420549.99653115735 379581.74101978104 316681.0623253652 290698.70728929876 366205.2976504768 422716.6199054361 310970.4190938062 1.0722171985478488 1.0985911377702253 0.9739552075296704 1.3523794248876637 1.2206361689510983 1.0183639435808727 0.9348114464919819 1.1776210056172856 1.3593467222292968 1.0 18.246417825672484 RSPS(ph)PKPT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 RSPSPKPTK 9 2 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 RS(0.563)PS(0.719)PKPT(0.719)K 73.46600000000001 0.052570000000000006 5536900000.0 4776400.0 3740700.0 3394900.0 4119000.0 3700600.0 3817200.0 3747000.0 3648600.0 4937400.0 3931400.0 True False 4511443.570482658 3560991.1570948246 3613740.686032054 4510468.5215774905 3991816.1664662273 3793375.4388815523 4125783.3271959554 3635943.858189645 4040892.6217252696 3896570.854582917 1.1577984178515743 0.9138781995729903 0.9274156228371377 1.15754818529029 1.0244433671137503 0.9735163507728873 1.0588241510720773 0.9331137540879726 1.0370381477787347 1.0 21.893773619625776 -10.344229610380399 7.650623621796205 0.999999847443891 1.0158667123493927 0.0027240246643854826 0.08333800827298647 2.1178128783660115e-07 1.8107532205426585e-08 0.07878613743559601 0.01910826143120458 4.526581973989842e-11 10.344229610380399 0.01586686490550171 RSPS(ph)PLGTSVR ddPTM_KYSE-520_SHP099_60min_R1 8 RSPSPLGTSVR 11 1 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 RS(0.268)PS(0.732)PLGTSVR;RS(0.417)PS(0.583)PLGTSVR;RS(0.009)PS(0.991)PLGTSVR;RS(0.001)PS(0.999)PLGTSVR;RS(0.048)PS(0.894)PLGT(0.029)S(0.029)VR;RS(0.049)PS(0.951)PLGTSVR;RS(0.1)PS(0.9)PLGTSVR;RS(0.271)PS(0.72)PLGT(0.004)S(0.004)VR 134.25 7.7584e-05 19818520000.0 1697465.0 1596822.0 1391011.0 1306069.0 1263602.0 1370288.0 1210145.0 1415406.0 1650105.0 1264701.0 True False 1603303.2326374135 1520108.2742413126 1480677.7947562924 1430197.4050760376 1363040.288488098 1361735.5243094764 1332478.266477061 1410496.2869442445 1350487.5277619753 1253496.7330624887 1.2790645482739256 1.212694244944261 1.181237857029563 1.140966200671175 1.0873903796765207 1.0863494801319054 1.0630089663030935 1.1252492724876764 1.0773761846690442 1.0 20.257526805463566 -1.0000000000004408 0.27627950601997137 1.0423625882270504 2.8530720739766826 0.8908504618556633 0.025481321924476667 16.518785032218325 0.23214161041075926 0.030158250273314667 14.375832916640572 0.09999999999989852 1.0000000000004408 1.8107094857496322 RSPS(ph)PY(ph)YSR ddPTM_KYSE-520_SHP099_60min_R1 3 RSPSPYYSR 9 1 P62995;P62995-3;H7C2L4;H7BXF3;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 RS(0.059)PS(0.92)PY(0.881)Y(0.031)S(0.108)R;RS(0.235)PS(0.95)PY(0.753)Y(0.015)S(0.048)R;RS(0.116)PS(0.974)PY(0.699)Y(0.124)S(0.087)R 129.74 0.0019627 21285900000.0 8737100.0 7574500.0 7264000.0 7871000.0 7540700.0 7584900.0 7695800.0 8071500.0 9018000.0 7218600.0 True False 8252435.646022949 7210609.650443703 7732249.062810942 8619057.473497564 8134110.189286039 7537559.8256242005 8473766.567770101 8043501.850402258 7380558.525280203 7154648.819985823 1.1534368567427886 1.0078216040878987 1.0807307608462413 1.2046793197481693 1.1368985947380374 1.0535191894490687 1.1843721167836287 1.124234333896796 1.0315752332474128 1.0 22.77044952452226 -7.861761926823071 4.091021987128725 1.002389758750963 1.1168606206908849 0.3533089650431811 0.05602690239496165 0.24619264191144646 6.9654524396755235 0.055458735163568126 0.014724689457988653 1.3747954089838757e-08 7.861761926823071 0.11447086193992195 RSPS(ph)PYYSR ddPTM_KYSE-520_SHP099_60min_R1 3 RSPSPYYSR 9 1 P62995;P62995-3;H7C2L4;H7BXF3;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 1 RS(0.266)PS(0.626)PYYS(0.108)R;RS(0.008)PS(0.693)PYYS(0.298)R;RS(0.007)PS(0.681)PYYS(0.312)R 120.55 0.00079768 1154800000.0 994300.0 939430.0 887450.0 785900.0 777440.0 839890.0 825960.0 812580.0 1078550.0 761290.0 True False 939144.1969120897 894298.3726868224 944656.4469702035 860591.6997105493 838620.1049714931 834647.9349686232 909456.0973927854 809761.3496375984 882712.5080329286 754545.5628746575 1.2446487569738676 1.185214540629908 1.2519541475683247 1.1405430527374367 1.1114240759385419 1.1061597550037838 1.2053030885609504 1.073177538215957 1.169859782449694 1.0 19.525248494272454 -2.5382427956849 0.020568338783722787 2.2798871221075567e-07 2.531507860917267 0.6067312747544111 0.04690081131426277 1533.5756432510016 3.2058236433656124 156.02944515233824 247.76298148672387 0.0028957242580790687 2.5382427956849 2.531507632928555 RSPS(ph)YPPPGCGK ddPTM_KYSE-520_SHP099_60min_R1 8 RSPSYPPPGCGK 12 1 F5H3X8;E9PFI7;Q8N3A8-2;Q8N3A8 F5H3X8 PARP8 Poly [ADP-ribose] polymerase 8 1 RS(0.328)PS(0.671)YPPPGCGK;RSPS(1)YPPPGCGK;RS(0.02)PS(0.98)YPPPGCGK;RS(0.001)PS(0.999)YPPPGCGK;RS(0.001)PS(0.999)YPPPGCGK;RSPS(1)YPPPGCGK;RSPS(1)YPPPGCGK;RS(0.008)PS(0.991)YPPPGCGK 172.43 1.9486000000000003e-06 9745260000.0 9275770.0 9032500.0 8759610.0 8300900.0 8732010.0 8378570.0 8270950.0 8623800.0 10662890.0 9154190.0 True False 8761224.547310933 8598565.141941093 9324268.476471553 9089815.040243406 9419169.508659352 8326276.23675726 9107058.342693174 8593886.050610043 8726777.96558272 9073090.998452047 0.9656273202600613 0.9476996476072033 1.0276837825237684 1.0018432573633629 1.0381433968056033 0.917689047555877 1.0037437455710432 0.9471839367726214 0.9618307550394445 1.0 23.113162697635698 -8.615542769111498 11.639227499864115 0.999999996219899 0.979950632098141 0.02846360962150818 0.03637859988081495 982812.733596519 50755.38090618797 0.03554994701165141 0.008887486752849894 2.4235792798813394e-09 8.615542769111498 -0.02004936412175795 RSPSLSS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 RSPSLSSK 8 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RS(0.019)PS(0.273)LS(0.273)S(0.435)K 70.808 0.024 0.0 321140.0 264150.0 237350.0 302350.0 256740.0 271730.0 289290.0 271480.0 310070.0 223070.0 True False 303325.72402328136 251459.83750276663 252649.96077342756 331085.2530951581 276943.9773492245 270034.03227687464 318534.2563983229 270538.2992439083 253769.10422861276 221093.77334583414 1.3719324584904538 1.1373447279740168 1.1427276171103804 1.4974879124129636 1.2526086698788648 1.2213552113676593 1.4407201594957297 1.2236359945819606 1.1477894668325552 1.0 17.754298869606412 -7.951620025831571 2.157173986863444 1.003891077719022 1.2875462200229761 0.4018905480509245 0.1122714158850643 0.307068892050733 3.2109791560165397 0.1085871657325271 0.03025357014260292 1.1178408445615345e-08 7.951620025831571 0.28365514230395417 RSPSPYYS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RSPSPYYSR 9 1 P62995;P62995-3;H7C2L4;H7BXF3;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 1 RS(0.013)PS(0.392)PYYS(0.595)R 87.777 0.0047757 635620000.0 297280.0 294180.0 252460.0 203180.0 240150.0 260620.0 222080.0 238060.0 294790.0 267220.0 True False 280789.2857870122 280047.1512268177 268733.97555028193 222490.1661117057 259048.43873341213 258993.37390791948 244530.01369193417 237234.22542362174 241263.56705115852 264852.6386940144 1.0601717512484725 1.0573696853002004 1.0146547033679043 0.8400526693213343 0.9780851722330474 0.9778772648255011 0.9232681799875928 0.8957215853820496 0.9109351080692518 1.0 18.0148303565356 -5.03618027720451 9.07984133195515 0.9309830892730461 1.0532585441936162 0.588321352613197 0.04384053948575069 0.2595417068209925 63.33398167778528 0.01188925253644404 0.021016880374087988 9.200675691097244e-06 5.03618027720451 0.12227545492057013 RSPT(ph)EDFR ddPTM_KYSE-520_SHP099_60min_R1 3 RSPTEDFR 8 1 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 RS(0.316)PT(0.684)EDFR;RS(0.353)PT(0.647)EDFR;RS(0.264)PT(0.736)EDFR 97.81299999999999 0.0058713 3243600000.0 4288800.0 3839200.0 3573700.0 3803600.0 3966400.0 3748000.0 3686200.0 4038700.0 4434700.0 4044300.0 True False 4050891.7144891587 3654759.069243311 3804066.420122171 4165093.000405958 4278533.114271103 3724607.3417499904 4058837.069845132 4024690.6923396634 3629470.2696895176 4008470.648417791 1.0105828556055692 0.9117589698918974 0.9490069290200985 1.0390728449140543 1.067372943334364 0.9291841374016682 1.0125649969389752 1.0040464419836215 0.9054501299946225 1.0 21.934620479622463 -3.8864178312635675 20.663701371167114 0.9817341835232198 7.425223130165936 0.02947573006238402 0.051915414992923646 3889.5137535093318 718254.6899361474 0.012869520935447808 17857.816071446032 0.0001298919296772338 3.8864178312635675 6.443488946642716 RSPT(ph)SS(ph)PTPQR ddPTM_KYSE-520_SHP099_60min_R1 3 RSPTSSPTPQR 11 1 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 2 RS(0.203)PT(0.767)S(0.194)S(0.835)PT(0.001)PQR;RS(0.316)PT(0.629)S(0.115)S(0.92)PT(0.02)PQR;RS(0.346)PT(0.635)S(0.24)S(0.73)PT(0.049)PQR 143.64 0.00044041 2355520000.0 1085070.0 958180.0 976460.0 885080.0 957260.0 921650.0 947190.0 960730.0 1086360.0 855540.0 True False 1024879.0040665825 912147.5945424984 1039404.1739912409 969197.7370909948 1032590.915935648 915897.6404812904 1042941.2088835693 957397.4518660675 889104.408907008 847960.5812000488 1.2086399141527966 1.075695751389305 1.225769448528206 1.142974990322509 1.2177345726074993 1.0801181809478642 1.2299406741379186 1.129058912751748 1.0485209202162815 1.0 19.693637674804275 -7.7975168639179495 2.632373188543686 1.0036894041836877 1.1656175406554106 0.5378476122873275 0.05346198893234721 0.18888369118070783 2.485967342209577 0.04610237509060802 0.012929312162752636 1.593980984262788e-08 7.7975168639179495 0.16192813647172288 RSPTGS(ph)TTSR ddPTM_KYSE-520_SHP099_60min_R1 3 RSPTGSTTSR 10 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RS(0.288)PT(0.154)GS(0.527)T(0.026)T(0.005)SR;RS(0.043)PT(0.214)GS(0.683)T(0.035)T(0.004)S(0.021)R;RS(0.023)PT(0.058)GS(0.437)T(0.437)T(0.04)S(0.005)R 101.56 0.002016 1433440000.0 1178640.0 889980.0 897300.0 986100.0 994410.0 1092170.0 1108020.0 981850.0 1225540.0 1191720.0 True False 1113258.4896394098 847224.0249127847 955141.393730762 1079818.647518225 1072664.4095810626 1085353.3619101082 1220029.4748331073 978444.1915155128 1003012.8293492885 1181162.2879441308 0.9425110342602363 0.7172799483696846 0.8086453516842559 0.9142000710145435 0.9081431235398534 0.918885891454609 1.032905882016117 0.8283740528310817 0.8491744441782678 1.0 20.171775769391132 -5.269473591453543 8.440287033511453 0.918546075645845 0.8121675864802574 0.25494769847018406 0.07667283791178103 0.18862575903740658 134.31585831994263 0.021283574843268045 0.03334730921296875 5.376831275237123e-06 5.269473591453543 -0.10637848916558756 RSPTGSTTS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 RSPTGSTTSR 10 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 RS(0.019)PT(0.069)GS(0.173)T(0.173)T(0.173)S(0.392)R 96.334 0.0028593000000000004 44456000.0 75774.0 62488.0 57689.0 75485.0 75392.0 73621.0 77962.0 65041.0 82585.0 81355.0 True False 71570.66516827597 59485.98268359977 61407.725245663576 82659.07170460722 81324.92147819871 73161.50403067659 85843.15979579679 64815.3879516835 67589.64579843255 80634.25799323224 0.887596251884441 0.7377259264739873 0.7615587564632593 1.0251110850619463 1.0085653852612426 0.9073253211658145 1.0645991162094124 0.8038194877061255 0.8382249366529231 1.0 16.299105286993004 -5.250014181424499 24.988181939703505 0.9469685550829449 0.7898368621016929 0.40325873871330453 0.08573810791898981 767.8062208973289 1679274.8089725825 0.024258740485836674 0.0415587825344207 5.623229628321449e-06 5.250014181424499 -0.15713169298125196 RSPTSS(ph)PTPQR ddPTM_KYSE-520_SHP099_60min_R1 2 RSPTSSPTPQR 11 1 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 RS(0.166)PT(0.105)S(0.166)S(0.444)PT(0.119)PQR;RS(0.027)PT(0.235)S(0.235)S(0.425)PT(0.079)PQR 63.602 0.039352 419430000.0 405660.0 345010.0 370500.0 360450.0 385210.0 363900.0 392320.0 407980.0 460780.0 380660.0 True False 383157.2311368385 328435.201729432 394383.0228209603 394707.05962675606 415523.8354549141 361628.76511814876 431979.53427422384 406564.8126032477 377113.9673185416 377287.64854899887 1.0155573144533443 0.8705167078555386 1.045311248162266 1.0461701069323368 1.1013449209190038 0.9584961673379125 1.1449607108410866 1.0775990525182713 0.9995396583187252 1.0 18.52530534514199 -4.857090826717829 8.993046611237233 1.052140630890233 0.9433919902650454 0.31738281543916147 0.06042486152860262 0.2641448826113369 22.104254979884033 0.015056441296782014 0.03149354679208387 1.3896619721319574e-05 4.857090826717829 -0.10874864062518763 RSQS(ph)FNSIDK ddPTM_KYSE-520_SHP099_60min_R1 2 RSQSFNSIDK 10 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;H0YHX7;A0A1B0GTC4;F8VZV4 Q8IVL0-3 NAV3 Neuron navigator 3 1 RS(0.06)QS(0.94)FNSIDK;RS(0.346)QS(0.654)FNSIDK 141.75 0.00015002 923820000.0 1033810.0 976500.0 1011070.0 960910.0 991190.0 926200.0 867140.0 998060.0 1088740.0 975290.0 True False 976462.4984508582 929587.4742436181 1076245.1899691983 1052234.5974918727 1069191.0139003582 920419.2422435537 954798.9736708555 994597.9628089542 891052.2609019263 966649.689364138 1.010151360099412 0.9616591040908529 1.11337664700141 1.0885376668191271 1.1060790953170139 0.9521745595852883 0.9877404236263937 1.028912514794476 0.9217943901560248 1.0 19.882633630961934 -6.271919926925663 24.978770909435713 0.9805324120668287 1.0557213919643686 0.37788517952875267 0.04988705213267661 880.7827620077661 2099204.1596003138 0.018735010371064603 0.01670506514641969 5.346629288233148e-07 6.271919926925663 0.07518897989753992 RSQS(ph)FSK ddPTM_KYSE-520_SHP099_60min_R1 2 RSQSFSK 7 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 RSQS(1)FSK;RS(0.001)QS(0.942)FS(0.057)K 136.96 0.001155 3649900000.0 1693210.0 1397110.0 1464730.0 1583710.0 1701150.0 1476980.0 1431290.0 1532250.0 1783800.0 1777780.0 True False 1599284.2659695474 1329990.7384951364 1559148.8394508625 1734225.3222402253 1835020.8267805271 1467761.619962086 1575978.7612442728 1526934.9823798372 1459906.8859386595 1762030.2522919108 0.907637234882502 0.7548058478367149 0.8848592908225292 0.9842199474069647 1.041424132414115 0.8329945629780968 0.8944107283029694 0.8665770524619085 0.828536788196302 1.0 20.7488072634218 -4.99026036261075 24.771482171827184 0.9172682855376917 0.8283742623942226 0.18353428638088387 0.0751691920368602 316.3829203995384 804662.5925821301 0.020376809384144375 0.04233221059755626 1.0226797047544732e-05 4.99026036261075 -0.08889402314346906 RSQS(ph)S(ph)S(ph)QGDNPLAPGYLPPHYK ddPTM_KYSE-520_SHP099_60min_R1 1 RSQSSSQGDNPLAPGYLPPHYK 22 1 Q6ZRV2;A0A494C1T9 Q6ZRV2 FAM83H Protein FAM83H 3 RS(0.624)QS(0.737)S(0.737)S(0.902)QGDNPLAPGYLPPHYK 61.417 0.010935 262680000.0 80973.0 65451.0 67938.0 54742.0 47334.0 72190.0 77204.0 76737.0 75589.0 66583.0 True False 76481.26627432644 62306.63571604612 72317.3921846434 59944.663221217554 51058.91650638071 71739.43543247922 85008.53375842977 76470.8172575505 61863.943043624466 65993.12642079013 1.1589277614559594 0.9441382625027046 1.0958321889999274 0.9083470729814205 0.7737005242154337 1.087074356426896 1.288142241002377 1.1587694265301476 0.9374300991464344 1.0 16.01002814651976 -6.501422726371363 24.916368301181272 1.1205008208823564 0.9725964867817445 0.1588424270941622 0.1311515584205861 1174.0792097881117 1363433.564684951 0.04775337363119605 0.041707692223251734 3.15193515131597e-07 6.501422726371363 -0.14790433410061188 RSRFGGTST(ph)PQAKNK ddPTM_KYSE-520_SHP099_60min_R1 1 RSRFGGTSTPQAKNK 15 3 J3QRH7;G3V1Q5;J3KTN9;Q8NA82 J3QRH7 MARCH10 Probable E3 ubiquitin-protein ligase MARCH10 1 RS(0.087)RFGGT(0.087)S(0.087)T(0.74)PQAKNK 48.848 0.060551999999999995 1593000000.0 3671100.0 3254400.0 3336100.0 3223200.0 3368900.0 3654400.0 3291300.0 3632900.0 4211200.0 2947900.0 True False 3467456.764843586 3098053.7390460074 3551150.3439487326 3529531.9589095865 3634013.2635810594 3631591.534069152 3624016.7239925386 3620298.317825235 3446552.2357130116 2921783.899431499 1.1867601726186048 1.0603295266459665 1.2154048575049274 1.2080058212369296 1.243765243654105 1.2429363905988264 1.2403438613983995 1.239071212121351 1.179605458289923 1.0 21.47841804700437 -4.789555505524154 24.98355298501284 1.2100543533441157 1.1235448259911864 0.10766891139286405 0.07553293152854464 291.96154583351546 259431.98909567177 0.018200220272126148 0.037898348334912395 1.6234708475949867e-05 4.789555505524154 -0.08650952735292927 RSS(ph)AIGIENIQEVQEK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSAIGIENIQEVQEK 16 1 J3KPC5;P47736-3;F2Z357;P47736;P47736-4;A0A0A0MQY8;X6R8W7;P47736-2 J3KPC5 RAP1GAP Rap1 GTPase-activating protein 1 1 RS(0.006)S(0.994)AIGIENIQEVQEK;RS(0.026)S(0.974)AIGIENIQEVQEK 306.62 1.4473999999999999e-37 595410000.0 1358940.0 1101400.0 933080.0 933620.0 918290.0 910520.0 881210.0 1023960.0 1146450.0 1128430.0 True False 1283556.889220272 1048487.0907648964 993227.829780786 1022350.9640969115 990554.1986446169 904837.1069397549 970291.3065808226 1020408.1217540603 938283.5796526367 1118432.988105254 1.1476386183804856 0.9374608062492384 0.888053053105507 0.9140922835519043 0.8856625378358362 0.8090221913720969 0.8675453218029634 0.912355172465667 0.8389269537213759 1.0 20.093047387970255 -4.165064642954566 1.9536012777248248 0.882400811100249 1.2757162090834566 0.7173608029019958 0.04827602386641382 0.5213049212680911 1.719297803410985 0.012440383387840313 0.4009371107280507 6.838098574100313e-05 4.165064642954566 0.3933153979832076 RSS(ph)DGS(ph)LSHEEDLAK ddPTM_KYSE-520_SHP099_60min_R1 6 RSSDGSLSHEEDLAK 15 1 A0A2R8Y7R9;Q13136-2;Q13136;E9PJZ7;H0YEF9 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 2 RS(0.059)S(0.783)DGS(0.676)LS(0.482)HEEDLAK;RS(0.444)S(0.556)DGS(0.997)LS(0.003)HEEDLAK;RS(0.342)S(0.658)DGS(0.988)LS(0.012)HEEDLAK;RS(0.428)S(0.573)DGS(0.997)LS(0.002)HEEDLAK;RS(0.477)S(0.543)DGS(0.954)LS(0.026)HEEDLAK;RS(0.391)S(0.614)DGS(0.984)LS(0.011)HEEDLAK 143.95 6.4143e-06 4014940000.0 5325880.0 5180100.0 4933420.0 5665990.0 5236190.0 4967080.0 5037110.0 4940750.0 6230670.0 4881810.0 True False 5030442.81952144 4931240.220511381 5251436.14695109 6204483.98605799 5648248.363154296 4936078.6112752315 5546310.236256206 4923611.691429719 5099337.390408907 4838560.9613907095 1.0396568028514783 1.0191543022523029 1.085330160941428 1.28229943480441 1.1673405395167047 1.0201542670770636 1.146272679111203 1.0175776911188412 1.053895451788055 1.0 22.206146608030515 -7.418801926624058 1.443406587332104 1.0122351358854647 1.1117920904696 0.18129460448555146 0.07718245239229236 0.8210048523072603 3.0055530362944443 0.0741231554603881 0.025819297682595246 3.812396598391318e-08 7.418801926624058 0.09955695458413527 RSS(ph)DPLGDTASNLGSAVDELMR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSDPLGDTASNLGSAVDELMR 22 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 RS(0.134)S(0.866)DPLGDTASNLGSAVDELMR 258.13 4.931799999999999e-36 414020000.0 156650.0 174710.0 147950.0 130740.0 151670.0 143760.0 122520.0 127460.0 193510.0 132490.0 True False 147960.31222596686 166316.6693549434 157487.09372836986 143165.49029158583 163605.56611574674 142862.74051493575 134905.51727997002 127017.8710093875 158373.46199012778 131316.24167566028 1.1267479965762042 1.266535405161314 1.1992963834386101 1.0902344482656774 1.2458898002871441 1.0879289468837703 1.027333066789826 0.9672670294898525 1.2060462587811223 1.0 17.00268583953133 -6.447193303426423 5.261408316698661 1.0484357995331055 1.1852141885024827 0.4233792764530372 0.07565310338417729 0.21266486888932332 10.552423479985034 0.026603041411451644 0.023053901875373217 3.5711385225811523e-07 6.447193303426423 0.13677838896937722 RSS(ph)DSWEVWGSASTNR ddPTM_KYSE-520_SHP099_60min_R1 3 RSSDSWEVWGSASTNR 16 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 RS(0.19)S(0.802)DS(0.007)WEVWGSASTNR;RS(0.011)S(0.797)DS(0.191)WEVWGSASTNR;RS(0.202)S(0.74)DS(0.056)WEVWGSAS(0.001)T(0.001)NR 209.43 1.0188e-17 7879900000.0 5015500.0 5208200.0 4627200.0 4127950.0 4298160.0 4332800.0 3932760.0 4518100.0 5868100.0 4845800.0 True False 4737280.216848622 4957990.254332422 4925476.715781774 4520269.126886583 4636400.738814914 4305757.388029447 4330321.760838848 4502427.765632463 4802600.962762998 4802869.981975355 0.986343630917996 1.0322974123678585 1.025527806138111 0.9411600030503965 0.9653396315567188 0.8964967621835449 0.9016112818148463 0.9374452738736591 0.9999439878211639 1.0 22.195465323371437 -5.265039689656636 24.375747959681664 0.9427868205613018 1.0164803992669633 0.42107487230308227 0.034869113802306895 188.2750765488436 1274714.6871580214 0.009989103333529776 0.015518846593602063 5.432006867586954e-06 5.265039689656636 0.07369357870566151 RSS(ph)DSYPLAPVR ddPTM_KYSE-520_SHP099_60min_R1 8 RSSDSYPLAPVR 12 1 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 RS(0.004)S(0.994)DS(0.002)YPLAPVR;RS(0.001)S(0.996)DS(0.002)YPLAPVR;RS(0.05)S(0.94)DS(0.01)YPLAPVR;RS(0.001)S(0.999)DSYPLAPVR;RS(0.026)S(0.967)DS(0.006)YPLAPVR;RS(0.393)S(0.555)DS(0.053)YPLAPVR;RS(0.003)S(0.988)DS(0.009)YPLAPVR;RS(0.01)S(0.957)DS(0.033)YPLAPVR 206.7 5.3715e-09 11003870000.0 7786470.0 6887550.0 6567160.0 5661920.0 5456400.0 6385900.0 6110500.0 5472780.0 6443950.0 7062560.0 True False 7354538.987156876 6556661.7595766885 6990489.641427507 6200027.174481676 5885787.6373307975 6346043.229370665 6728208.972733086 5453796.203536454 5273891.118760185 6999991.212988536 1.0506497456040338 0.9366671414402283 0.9986426309302504 0.8857192796153057 0.84082786081355 0.906578742212638 0.9611739169399018 0.779114721375206 0.753413962716759 1.0 22.738921680383804 -4.42108681932887 0.6061600373899938 0.8587992680028086 1.1263583953099205 0.33995277805438295 0.07538116837739521 3.533349369726727 1.1277700460737903 0.039782405328104134 0.6445171244204514 3.792391641140342e-05 4.42108681932887 0.26755912730711195 RSS(ph)EMLVK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSEMLVK 8 1 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 RS(0.194)S(0.806)EMLVK 93.839 0.0024559 374670000.0 275900.0 231650.0 217450.0 164760.0 168470.0 176690.0 175400.0 190430.0 189840.0 203240.0 True False 260595.27700698545 220521.18628626128 231467.17493230145 180418.74086309978 181727.6305368224 175587.21217017228 193131.1437390367 189769.44277669603 155369.8414769563 201439.4517183273 1.2936655396152275 1.0947268988530408 1.1490657513105322 0.8956474976678314 0.9021451805326202 0.8716624805735462 0.9587553088115623 0.9420669146878465 0.7712979763974431 1.0 17.61998673585734 -4.941993092711008 1.2682433479208104 0.8990573362147725 1.2591894201678615 0.7447889026501171 0.07325475288185544 0.27722081410676924 0.7695101108017063 0.023065330795604085 0.09577141637084821 1.1428965119807047e-05 4.941993092711008 0.36013208395308904 RSS(ph)GFISELPSEEGK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSGFISELPSEEGK 15 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(0.004)S(0.996)GFISELPSEEGK;RS(0.05)S(0.95)GFISELPSEEGK 292.65 3.7254999999999994e-33 2720900000.0 1578950.0 1399800.0 1203350.0 1394690.0 1366940.0 1307800.0 1327160.0 1525850.0 1642920.0 1372060.0 True False 1491362.4959412112 1332551.5068573654 1280919.8664280744 1527240.9182711618 1474510.4011753069 1299637.535096222 1461322.284633409 1520557.182486068 1344607.1426428645 1359904.6158465256 1.096666985730359 0.9798860091579782 0.9419189048275389 1.1230500290055059 1.0842748704529106 0.9556828618360208 1.074577045775929 1.1181351726933715 0.9887510689901301 1.0 20.37507403324751 -5.255230975429313 24.945963245891956 1.0527534620719703 1.0035301797212088 0.08638644405757057 0.06325950015676529 1184.1505156987696 4758006.825127484 0.01744287014940153 0.029163449442815556 5.556086834336259e-06 5.255230975429313 -0.049223282350761455 RSS(ph)GFISELPSEEGKK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSGFISELPSEEGKK 16 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 RS(0.414)S(0.584)GFIS(0.002)ELPSEEGKK 78.708 0.007714100000000001 895000000.0 328570.0 299690.0 279930.0 329560.0 223670.0 274720.0 309820.0 332020.0 356450.0 269270.0 True False 310343.5671119439 285292.44255613873 297974.73570383585 360881.2833141729 241271.55649178528 273005.3705777902 341139.62915181427 330868.30011405086 291727.66537326755 266884.4772888903 1.1628385819382487 1.0689735328717627 1.116493318497845 1.352200348930505 0.9040299343847555 1.0229346170713194 1.2782295644064237 1.23974351552826 1.0930859236803256 1.0 18.025855871375704 -9.438070556806045 14.030677276474915 1.000000035565803 1.138182142456497 0.10096365835605259 0.1231839599667349 0.0 0.0 0.12239230400780829 0.02968449395217067 3.6469469270040237e-10 9.438070556806045 0.1381821068906941 RSS(ph)GISPYFSSR ddPTM_KYSE-520_SHP099_60min_R1 2 RSSGISPYFSSR 12 1 P10070;P10070-3;P10070-1;P10070-4;P10070-2 P10070;P10070-4 GLI2 Zinc finger protein GLI2 1 RS(0.162)S(0.838)GISPYFSSR;RS(0.09)S(0.909)GISPYFSSR 130.27 4.456600000000001e-05 1290750000.0 381900.0 322460.0 307180.0 254950.0 221650.0 219492.0 263800.0 280050.0 290220.0 370180.0 True False 360715.2457012247 306968.5375776724 326981.31430537754 279180.37134648714 239092.59398401357 218122.0690115768 290467.4784398967 279078.5719141615 237523.36385083362 366900.493195682 0.9831418937582118 0.8366533795144134 0.8911988955299277 0.7609157701447667 0.6516551447002181 0.594499252676785 0.7916791714013296 0.7606383122666402 0.6473781536296637 1.0 18.485029318326855 -5.3061431670107515 3.4090606726693915 0.7229155964888595 0.9005211178165945 0.29957965512100904 0.11014261850718403 0.2758840951672789 6.563474157075527 0.030763162007256033 0.05046777853980999 4.941477622364153e-06 5.3061431670107515 0.177605521327735 RSS(ph)GREEDDEELLR ddPTM_KYSE-520_SHP099_60min_R1 2 RSSGREEDDEELLR 14 2 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;A0A494C1P1;A0A494C1G0;J3QSX6;O14639-4;O14639-3;O14639-5 F8W8M4;J3QSX6 ABLIM1 Actin-binding LIM protein 1 1 RS(0.193)S(0.807)GREEDDEELLR;RS(0.351)S(0.649)GREEDDEELLR 162.42 2.9287999999999997e-08 1827190000.0 389080.0 401670.0 429490.0 375620.0 349020.0 447830.0 350600.0 385620.0 545510.0 383780.0 True False 367496.95678824943 382373.17028103844 457175.61260829685 411318.81186572934 376485.88834784745 445034.9268558965 386042.0695262614 384282.3742243844 446459.13518802414 380380.0077763219 0.9661311038311766 1.005239924454412 1.2018918009937414 1.081336567266702 0.9897625549480393 1.169974545869388 1.01488527691831 1.0102591260536415 1.1737187182838467 1.0 18.537081896660766 -4.539123178338095 24.9993382552389 1.079961194307007 0.9759082170652308 0.21249041727930162 0.07448508151495885 292.66367341061937 450393.43308418785 0.01845332183337529 0.048852466704003714 2.8898601191223604e-05 4.539123178338095 -0.10405297724177631 RSS(ph)GREEDDEELLRR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSGREEDDEELLRR 15 3 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;A0A494C1P1;A0A494C1G0;J3QSX6;O14639-4;O14639-3;O14639-5 F8W8M4;J3QSX6 ABLIM1 Actin-binding LIM protein 1 1 RS(0.023)S(0.977)GREEDDEELLRR 182.82 1.1859000000000002e-09 175570000.0 93846.0 87677.0 111830.0 75033.0 74148.0 81518.0 84089.0 73470.0 103390.0 70512.0 True False 88640.17530263714 83464.86531413993 119038.74073432651 82164.11376050589 79983.02575559037 81009.21592443326 92589.53674955443 73215.1497180269 84616.98224980252 69887.31853750591 1.2683298938571705 1.1942776895832319 1.7032952934149685 1.1756655639379194 1.1444569262256996 1.1591404223208055 1.3248403099035069 1.047617096351108 1.2107630399983331 1.0 16.0927430734497 -5.478576232023225 24.997995746773686 1.1596439994223318 1.3809123256242724 0.3484597603235038 0.14819182868735592 530.3083973754295 299229.7890765774 0.0409716768934417 0.06076723087827591 3.322184655462292e-06 5.478576232023225 0.2212683262019406 RSS(ph)IGLR ddPTM_KYSE-520_SHP099_60min_R1 4 RSSIGLR 7 1 Q96GN5-2;Q96GN5;C9J8L0;C9IZR6;Q96GN5-5;Q96GN5-4 Q96GN5-2 CDCA7L Cell division cycle-associated 7-like protein 1 RS(0.006)S(0.994)IGLR;RS(0.015)S(0.985)IGLR;RS(0.003)S(0.997)IGLR;RS(0.004)S(0.996)IGLR 132.88 0.0012527999999999999 2033740000.0 509514.0 343443.0 417024.0 392846.0 422205.0 457917.0 507960.0 532520.0 645600.0 523780.0 True False 481250.24272902205 326943.48276154726 443906.0343019912 430181.96572654345 455430.13148215826 455058.970147313 559309.5540118647 530672.8124111023 528375.3142515962 519139.71669467323 0.9270148810672956 0.6297793681500115 0.8550800873574272 0.8286439120194509 0.8772785376196036 0.8765635830073686 1.0773777001169358 1.0222157838160786 1.0177901964729754 1.0 18.9857633395246 -6.389979837382283 1.3417935064477475 1.0332804751530045 0.7986796859462454 0.6038334281811071 0.07733117946118401 0.27480711277018455 1.0020231090182354 0.03774106884937131 0.030556560828622802 4.0739919133817964e-07 6.389979837382283 -0.23460078920675909 RSS(ph)LCLK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSLCLK 7 1 Q4LE39-2;Q4LE39;Q4LE39-3;X6RCR8 Q4LE39-2 ARID4B AT-rich interactive domain-containing protein 4B 1 RS(0.262)S(0.738)LCLK 87.94200000000001 0.00519 481270000.0 442080.0 435910.0 377190.0 379950.0 432360.0 456100.0 398740.0 403020.0 538930.0 413890.0 True False 417556.9411353681 414968.2292857509 401504.2709253387 416060.3337638672 466384.27220811235 453253.3107182952 439048.53052738594 401622.0176855756 441073.8973197227 410223.25660154724 1.0178773007522197 1.011566805654835 0.9787457548154629 1.0142290254596402 1.1369035389944133 1.1048942336259189 1.0702672836363272 0.979032785739093 1.075204514180289 1.0 18.646049758630546 -5.547818967743935 24.998441968740508 1.0638288297811478 1.0024258926531664 0.27752012910850665 0.043982587725680866 294.38736901452614 295072.6898173176 0.013738588127620471 0.017737185948201308 2.8325724854166604e-06 5.547818967743935 -0.061402937127981394 RSS(ph)LLNAK ddPTM_KYSE-520_SHP099_60min_R1 5 RSSLLNAK 8 1 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4;B7Z7Y1;Q8TEU7-2;Q8TEU7-5;Q8TEU7-3;D6RE77 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 RS(0.013)S(0.987)LLNAK;RS(0.116)S(0.884)LLNAK;RS(0.364)S(0.636)LLNAK;RS(0.228)S(0.772)LLNAK;RS(0.009)S(0.991)LLNAK 149.95 0.00044495 12352660000.0 11104220.0 11350820.0 10055200.0 10372180.0 11231430.0 10405260.0 10736670.0 10883610.0 13319040.0 10337650.0 True False 10488246.780886237 10805509.569271822 10703374.280888833 11357948.868690362 12115279.64290489 10340316.912704773 11822037.383401372 10845857.297163663 10900638.0816753 10246066.463570006 1.023636418734673 1.0546007687624241 1.0446325249738315 1.108517977027932 1.182432271543513 1.009198695857564 1.1538122874212018 1.058538643656687 1.0638851622164105 1.0 23.28856681953475 -5.238268470718455 19.18911151835436 1.0888806764539782 1.0423207049059247 0.09991174906164135 0.05445483777546322 87.90987274083426 72798.00322400632 0.01425641374768875 0.024625345876881338 5.777387923485016e-06 5.238268470718455 -0.04655997154805358 RSS(ph)LLSLMTGK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSLLSLMTGK 11 1 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 RS(0.043)S(0.951)LLS(0.006)LMTGK;RS(0.002)S(0.996)LLS(0.002)LMTGK 98.865 0.0018780000000000001 6015100000.0 3005300.0 3224200.0 2480500.0 2379400.0 2184090.0 2595100.0 2888800.0 2574100.0 3094100.0 2569400.0 True False 2838590.018082978 3069304.5923771374 2640396.998940323 2605537.460607306 2355965.4572278103 2578903.0182965295 3180828.0959710847 2565171.0478994534 2532289.4359136703 2546637.11496295 1.1146425226447216 1.20523830205066 1.036817135596776 1.0231286763623615 0.9251280613893379 1.0126700043535841 1.2490307618945393 1.007277806809461 0.9943660292371541 1.0 21.280161965629578 -4.775911575608704 24.024453001222668 1.034374628996639 1.1599403816349265 0.28568919577231877 0.08138546643132254 176.8384602874988 293561.1907016143 0.02263073848824069 0.04748948095265317 1.6752839369631568e-05 4.775911575608704 0.12556575263828762 RSS(ph)LLSR ddPTM_KYSE-520_SHP099_60min_R1 3 RSSLLSR 7 1 C9J417;O43521-11;O43521-10;O43521-14;O43521-19;O43521-4;O43521-8;O43521-12;O43521 C9J417 BCL2L11 Bcl-2-like protein 11 1 RS(0.256)S(0.743)LLSR;RS(0.04)S(0.96)LLSR;RS(0.071)S(0.929)LLSR 88.948 0.00698 0.0 340721.0 300722.0 240211.0 234423.0 295385.0 311826.0 247482.0 272535.0 278527.0 266139.0 True False 321820.5269195255 286274.86372707575 255695.38541118923 256702.49143815477 318630.11898925237 309879.7782680182 272499.8957515633 271589.6396951469 227953.51789429114 263781.2155130087 1.220028220332674 1.0852738818809398 0.9693464521873025 0.9731644117982888 1.207933318411518 1.1747605972068778 1.033052695665225 1.0296018962796578 0.8641764632517941 1.0 18.00898230494309 -7.393440069862147 2.3604923705376044 0.9368410309696771 1.0945480124613305 0.3397218684317307 0.08918935184109704 0.3948054797730536 4.111032375622383 0.07126652331089535 0.026743478293266107 4.041661432661171e-08 7.393440069862147 0.1577069814916534 RSS(ph)LPNGEGLQLK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSLPNGEGLQLK 13 1 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 RS(0.311)S(0.689)LPNGEGLQLK;RS(0.019)S(0.981)LPNGEGLQLK 173.46 5.244699999999999e-07 3133970000.0 3438190.0 2994580.0 2792830.0 2644370.0 2816770.0 2550390.0 2757650.0 2954640.0 3413030.0 2737650.0 True False 3247466.7468381594 2850715.8818437844 2972860.2904859968 2895690.1297411695 3038433.7737710285 2534472.069990866 3036420.17407043 2944391.043458163 2793309.787484708 2713396.5508594685 1.1968271817141967 1.0506079109376105 1.0956232289542578 1.0671828003997277 1.1197897973330158 0.9340588529855954 1.1190477017112164 1.0851311219237478 1.0294513666275307 1.0 21.371668475827587 -1.8943038931243068 1.417276015818108 1.057719409975612 134.66663815243734 0.3663803213288689 0.054723634935018 1571.466463899468 4.273440387057215 0.014830870231736229 681829.4002282115 0.012755459462249387 1.8943038931243068 133.60891874246173 RSS(ph)LPSFETLDYGDEEDIETQLSSSGK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSLPSFETLDYGDEEDIETQLSSSGK 27 1 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2;K7EPU8 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 RS(0.108)S(0.476)LPS(0.177)FET(0.238)LDYGDEEDIETQLSSSGK 98.37 0.0023206999999999998 108370000.0 80980.0 79254.0 71422.0 64354.0 69454.0 67125.0 59884.0 73706.0 91803.0 72592.0 True False 76487.87797037214 75446.51887732072 76025.97639924038 70470.18481126429 74919.6346607971 66706.04797624558 65937.65913151926 73450.3310891098 75133.88936530259 71948.89135572137 1.0630862620552364 1.0486126673489211 1.056666405370467 0.9794478202986308 1.0412896328087689 0.9271310053471883 0.9164513571935102 1.0208681427204371 1.0442675064141618 1.0 16.134684836523007 -5.257856660609984 23.24038895522136 0.9872544366077071 1.0553708808960363 0.3601554313920353 0.04032164349127462 136.07436001095067 882673.7298232324 0.012005455883983742 0.019780163664365386 5.522596831436885e-06 5.257856660609984 0.06811644428832919 RSS(ph)LS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSLSPGR 8 1 Q9BUQ8;F8W1J5;F8VVA2 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 2 RS(0.233)S(0.769)LS(0.998)PGR 105.25 0.004254399999999999 338660000.0 863330.0 815570.0 800360.0 835180.0 795980.0 750030.0 813450.0 884660.0 1010400.0 871070.0 True False 815439.3638943128 776388.7930044725 851952.4862212786 914555.2560939771 858619.0974933228 745348.7845604987 895681.4645069512 881591.3209411956 826936.8301112351 863352.9974822054 0.9445028467757417 0.8992715555151295 0.9867950753698961 1.059306284638025 0.9945168430494965 0.8633186966792932 1.0374452479102119 1.0211249900239863 0.9578200718858095 1.0 19.719591026414825 -4.778195671862913 21.00906972834794 0.9905963296585164 0.921887328119204 0.22050737326852377 0.05124738328266835 49.81300553958148 62457.67352603929 0.013963286669750045 0.02929369799139614 1.6664962016581327e-05 4.778195671862913 -0.06870900153931236 RSS(ph)LVG ddPTM_KYSE-520_SHP099_60min_R1 6 RSSLVG 6 1 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 RS(0.4)S(0.6)LVG;RS(0.029)S(0.971)LVG;RS(0.036)S(0.964)LVG;RS(0.019)S(0.981)LVG;RS(0.089)S(0.911)LVG;RS(0.015)S(0.985)LVG 73.26 0.042089999999999995 15595710000.0 16838930.0 12770120.0 13538210.0 12870030.0 13034840.0 13864470.0 13399610.0 12265140.0 15203600.0 13967150.0 True False 15904840.985325245 12156624.266859084 14410904.678501884 14093193.781684391 14060607.749905612 13777936.699965995 14754173.346391268 12222595.092045194 12443009.491566872 13843411.91727826 1.1489104767209932 0.8781523181930417 1.0409937062203085 1.018043374415116 1.0156894726477268 0.9952702976908067 1.0657902426479318 0.8829178214938407 0.898839792236225 1.0 23.72269622492411 -7.266329824303852 24.926093066747214 0.9181591031452958 1.0167961092988234 0.2797754771097337 0.06959994087535448 489.8271942542022 2496576.9179292107 0.03413924682559021 0.017270059915357818 5.41589424887882e-08 7.266329824303852 0.09863700615352755 RSS(ph)MGSTAVATDVK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSMGSTAVATDVK 14 1 Q6UXY1;B0QYF0;Q6UXY1-2 Q6UXY1 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 RS(0.28)S(0.694)MGS(0.016)T(0.009)AVATDVK;RS(0.134)S(0.863)MGS(0.002)T(0.001)AVATDVK 152.39 2.1572e-06 1532430000.0 830310.0 808310.0 710130.0 664750.0 695270.0 733880.0 700390.0 727090.0 867360.0 781560.0 True False 784251.04911805 769477.5743019542 755906.1160481729 727927.640135624 749983.7934548391 729299.5827010354 771192.2563476837 724567.8944940823 709869.2883662714 774635.9864444786 1.012412362505522 0.9933408565664485 0.9758210685740609 0.9397028447861783 0.9681757710446797 0.9414739251250979 0.9955543892136984 0.9353656519622783 0.9163907961783683 1.0 19.563158999117082 -4.7723421640049235 2.015835126398591 0.9554207912995621 1.0100955680504322 0.3556327601322413 0.024989926597257073 0.37810468633354083 2.9040391258275955 0.006920718759631018 0.026210710401898953 1.6891096224270622e-05 4.7723421640049235 0.05467477675087007 RSS(ph)MSMEETEHTC ddPTM_KYSE-520_SHP099_60min_R1 1 RSSMSMEETEHTC 13 1 O75030-12;O75030-11;O75030-10;O75030-9;O75030-4;O75030-3;O75030-8;O75030-7;O75030-6;O75030-2;O75030-5;O75030 O75030-12 MITF Microphthalmia-associated transcription factor 1 RS(0.135)S(0.863)MS(0.001)MEET(0.001)EHTC 131.32 3.4461999999999996e-05 178660000.0 84643.0 94027.0 93387.0 97848.0 88712.0 93744.0 81487.0 97509.0 104140.0 89928.0 True False 79947.68405836265 89509.80178259566 99406.87544448306 107147.44450092615 95693.12969776573 93158.90892342887 89724.50119648162 97170.76403777163 85230.80115576395 89131.30788292541 0.89696522980875 1.0042464753256781 1.11528572625743 1.2021302844749577 1.0736197187127483 1.045187276347316 1.00665527442204 1.0901978928145664 0.9562386458831638 1.0 16.443644655222535 -7.765791135108877 24.972307172012297 0.9781193017785634 1.058332947256234 0.136406478473304 0.0761158117593234 240.99794610020564 1382865.7436604523 0.070471246430714 0.02065649462106277 1.7147817978438615e-08 7.765791135108877 0.08021364547767051 RSS(ph)NVSYK ddPTM_KYSE-520_SHP099_60min_R1 5 RSSNVSYK 8 1 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 1 RS(0.153)S(0.847)NVSYK;RS(0.006)S(0.994)NVSYK;RS(0.142)S(0.858)NVSYK;RS(0.019)S(0.98)NVS(0.001)YK;RS(0.004)S(0.996)NVSYK 147.19 0.00050587 4321470000.0 5195220.0 5313340.0 4173340.0 4567200.0 4575450.0 4311260.0 4546770.0 4288110.0 5413690.0 4388570.0 True False 4907030.790185695 5058079.17091406 4442360.17398009 5001265.314821251 4935511.884250634 4284351.827159304 5006401.883798962 4273235.5472623985 4430700.364019085 4349690.684055795 1.1281332735159497 1.1628595084829665 1.0213048459431802 1.1497979231382738 1.1346811170601676 0.9849785049920914 1.1509788275636255 0.9824228566243457 1.0186242392499858 1.0 22.052481380757897 -6.971542454464121 0.6564229237719377 0.9913390797764647 1.12104775719329 0.3640369869224874 0.05849683705607979 0.8180697922434819 0.692810456343347 0.05219298084441024 0.03132948027966127 1.0677204124111117e-07 6.971542454464121 0.12970867741682524 RSS(ph)PAAFINPPIGTVTPALK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSPAAFINPPIGTVTPALK 20 1 F6VRR5;Q9BY77-2;Q9BY77;Q6R954;F8WEE2;Q8WUT1;F8WCX5 F6VRR5 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 1 RS(0.138)S(0.862)PAAFINPPIGTVTPALK 134.4 2.9071e-07 83262000.0 165110.0 192560.0 150270.0 130700.0 154780.0 163860.0 133700.0 159570.0 197160.0 179710.0 True False 155951.01916137504 183309.12856154723 159956.64464050086 143121.68870361196 166960.30542226756 162837.28895921906 147215.70078625542 159016.48891391797 161360.71399913996 178117.90921226444 0.875549347345679 1.0291448477710143 0.8980379645590795 0.803522168750885 0.9373583271926896 0.9142106466406175 0.8265070112114182 0.8927596872048214 0.9059207730023666 1.0 17.44247305675357 -3.9327464091030393 21.71534460282151 0.9058668869995155 0.0003132498616994539 0.02000454393499751 0.06490404653090268 2688.5903151386015 1575585.7533092552 0.01577537123102807 331210.55563486385 0.00011674911332082819 3.9327464091030393 -0.905553637137816 RSS(ph)PPGHYYQK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSPPGHYYQK 11 1 D6RI08;D6RDK1;D6RIV2;D6R9T5;D6RG39;D6RIT9;D6RDK6;D6RBN5;Q9NX40-3;Q9NX40-2;Q9NX40-4;Q9NX40 D6RI08 OCIAD1 OCIA domain-containing protein 1 1 RS(0.397)S(0.603)PPGHYYQK;RS(0.395)S(0.598)PPGHY(0.001)Y(0.006)QK 84.46799999999999 0.0028463 607440000.0 607840.0 778370.0 652790.0 1050400.0 781750.0 696580.0 734780.0 716980.0 1012290.0 615010.0 True False 574121.9035010007 740975.93684281 694869.8879009286 1150229.700185723 843269.2774509473 692232.3858367682 809058.7331617401 714492.9637243904 828483.653754257 609561.4898705402 0.9418605227553561 1.2155884995296862 1.139950438877801 1.886978950113812 1.383403137278312 1.1356235545388305 1.3272799325521196 1.1721425575558189 1.3591469729004892 1.0 19.217412235326186 -10.565688124326888 7.631271058183844 0.9998581410584468 1.292555610845678 0.1147033816393751 0.2363384988929076 0.0005928080929437439 3.373774813468701e-05 0.23781761868708476 0.057651649795633836 2.7183906995530662e-11 10.565688124326888 0.2926974697872311 RSS(ph)PSARPPDVPGQQPQAAK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.165)S(0.417)PS(0.417)ARPPDVPGQQPQAAK;RS(0.101)S(0.87)PS(0.029)ARPPDVPGQQPQAAK 164.05 6.0268999999999995e-09 9353600000.0 741670.0 651250.0 726820.0 543500.0 641310.0 591900.0 570860.0 589230.0 751360.0 620400.0 True False 700528.0866175095 619962.972453821 773671.9801531181 595154.0765907662 691777.4484452398 588205.7325458432 628568.099856707 587186.0986573158 614931.9642442374 614903.7386638969 1.139248377542252 1.0082276842240658 1.2582001563922887 0.9678817011000062 1.125017470130169 0.9565818120148938 1.0222219517196316 0.9549236111870001 1.0000459024373503 1.0 19.23000105298308 -5.991902070754299 1.2202533124249981 0.9843830279330675 1.1121491776718566 0.32802810143006966 0.07711838676236914 0.5272309690918512 1.6441375861511702 0.03237419845448223 0.03730741015604714 1.0188210965529215e-06 5.991902070754299 0.12776614973878908 RSS(ph)PSARPPDVPGQQPQAAKS(ph)PS(ph)PVQGK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSPSARPPDVPGQQPQAAKSPSPVQGK 28 3 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 3 RS(0.34)S(0.476)PS(0.184)ARPPDVPGQQPQAAKS(1)PS(1)PVQGK 78.683 0.0078936 1686900000.0 791600.0 686950.0 648940.0 652670.0 631010.0 628880.0 604490.0 620760.0 820160.0 638520.0 True False 747688.3699845235 653947.8908670282 690771.7107407113 714699.5605676097 680666.8970442232 624954.9266488083 665597.7484538782 618606.7284464734 671239.6185510993 632863.2095610432 1.1814375661102556 1.0333163327990094 1.0915023978401805 1.1293112789149626 1.0755355766632995 0.9875039616890985 1.0517245091803327 0.9774730448868119 1.0606393426103473 1.0 19.27153417596374 -6.0789884220361445 4.938949735629452 1.0167889806389139 1.102422988658423 0.52350294039192 0.04211253843863313 0.18655008114672186 8.096881938439932 0.013368025793023482 0.013563042166110005 8.337034102284961e-07 6.0789884220361445 0.08563400801950904 RSS(ph)PTQETQAPFIAK ddPTM_KYSE-520_SHP099_60min_R1 3 RSSPTQETQAPFIAK 15 1 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.319)S(0.676)PT(0.005)QETQAPFIAK;RS(0.103)S(0.895)PT(0.002)QETQAPFIAK;RS(0.209)S(0.791)PTQETQAPFIAK 220.86 2.6969e-14 1888700000.0 1727380.0 1773530.0 1525860.0 1240300.0 1334180.0 1556880.0 1275390.0 1389980.0 1973910.0 1412600.0 True False 1631558.78795334 1688326.956677197 1624219.3770623198 1358177.7390902082 1439172.37555421 1547162.9344246862 1404318.8678068959 1385158.4838037693 1615497.702221759 1400085.462986169 1.1653279968163328 1.2058742136185407 1.1600858804705445 0.9700677387174795 1.0279175190382126 1.1050489240312684 1.0030236760059617 0.9893385228423395 1.1538564930001833 1.0 20.41708346311095 -5.132740619446746 5.805369734868461 1.036719097457796 1.1846736097422719 0.5970269343512771 0.05346139178815593 0.1522929127847379 6.5285006529750556 0.014335541663694698 0.02529850511357643 7.36646925417825e-06 5.132740619446746 0.14795451228447587 RSS(ph)PVPPVPER ddPTM_KYSE-520_SHP099_60min_R1 6 RSSPVPPVPER 11 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RS(0.012)S(0.988)PVPPVPER;RS(0.031)S(0.969)PVPPVPER;RS(0.239)S(0.761)PVPPVPER;RS(0.154)S(0.846)PVPPVPER;RS(0.197)S(0.803)PVPPVPER;RS(0.24)S(0.76)PVPPVPER 130.27 9.745399999999999e-05 30595270000.0 13839900.0 13288800.0 11892200.0 10347200.0 11380900.0 12379600.0 10840800.0 12373600.0 14154800.0 12195700.0 True False 13072173.15784334 12650386.10110454 12658790.24019276 11330594.777000891 12276512.081536913 12302334.32442054 11936693.860012228 12330678.869619962 11584645.133470397 12087655.586111015 1.0814481819670274 1.046554148650638 1.0472494149103646 0.9373690949649489 1.0156239143381036 1.0177601633981197 0.9875110831026452 1.0201050800775782 0.9583864340725767 1.0 23.527031123664734 -5.041671123868852 15.172572110027687 0.9936857056553602 1.0597291380556304 0.583174549525609 0.026267358078599572 3.7233761765772013 1355.7079777044235 0.006946074013193383 0.012056640557231178 9.085082515043338e-06 5.041671123868852 0.06604343240027022 RSS(ph)PVPPVPERR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSPVPPVPERR 12 2 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 RS(0.394)S(0.606)PVPPVPERR 69.92 0.01902 654200000.0 443760.0 471130.0 392430.0 369780.0 471480.0 392930.0 361710.0 406490.0 559820.0 392250.0 True False 419143.7481863719 448496.20761945273 417726.6657102007 404923.78002158896 508582.7936457591 390477.57812001754 398275.1767494125 405079.98106547934 458170.79991376784 388774.9701658818 1.0781140257242703 1.1536138950202715 1.0744690316147818 1.041537678850099 1.3081675330815612 1.0043794176189103 1.0244362608515594 1.0419394563714854 1.178498707666999 1.0 18.568575813802447 RSS(ph)QDSLNTR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSQDSLNTR 10 1 Q9H992;Q9H992-2;F5H6W4 Q9H992 MARCH7 E3 ubiquitin-protein ligase MARCH7 1 RS(0.005)S(0.995)QDSLNTR 165.44 8.0387e-05 0.0 288410.0 242380.0 236950.0 204600.0 213160.0 242500.0 217020.0 198980.0 270910.0 257050.0 True False 272411.32236891915 230735.7009802028 252224.17613340498 224045.1224847671 229934.47928550543 240986.4675491924 238958.49951109284 198289.78482228125 221719.57308534696 254772.73698187375 1.069232625107373 0.9056530291018496 0.9899967285406598 0.8793920618779049 0.9025081804646331 0.9458879721747379 0.9379280622482536 0.778300642255882 0.8702641252432028 1.0 17.958851378697315 -1.000000001787248 0.7117958895651743 0.8960212731067765 22.443813633195184 0.35554812229099364 0.061478302756182275 343.14498807171867 1.734245263750159 0.023999398603680756 11790.017634743333 0.09999999958847096 1.000000001787248 21.54779236008841 RSS(ph)QPS(ph)PTAVPAS(ph)DSPPTK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSQPSPTAVPASDSPPTK 19 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 3 RS(0.388)S(0.611)QPS(0.538)PT(0.463)AVPAS(0.567)DS(0.419)PPT(0.014)K 74.471 0.013741999999999999 548500000.0 453380.0 423810.0 374900.0 457040.0 441380.0 416530.0 439730.0 500610.0 481640.0 490970.0 True False 428230.1076093768 403449.5314482206 399066.6538612086 500476.9441859138 476114.0948913317 413930.28176604176 484182.1997512342 498873.5007532529 394186.3171563486 486620.3877688795 0.8800085618541014 0.8290847272100714 0.8200779578736956 1.0284750839983618 0.9784096738615528 0.8506225636453154 0.9949895481592455 1.0251800238797086 0.8100489150560777 1.0 18.892437240082838 -5.243942227817125 24.81021537512838 0.9546824701431883 0.8416598353762436 0.35325091370857276 0.06964082532519368 837.300735797145 1187254.4505571693 0.01866307915480084 0.032228429800415764 5.702401236373279e-06 5.243942227817125 -0.11302263476694474 RSS(ph)QPS(ph)PTAVPASDS(ph)PPTK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSQPSPTAVPASDSPPTK 19 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 3 RS(0.47)S(0.532)QPS(0.916)PT(0.082)AVPAS(0.185)DS(0.809)PPT(0.006)K 68.461 0.026273 480170000.0 380650.0 355880.0 297960.0 309000.0 334340.0 341320.0 316860.0 383060.0 373850.0 365670.0 True False 359534.5856930379 338782.99061322963 317166.97835285624 338367.2670957628 360650.65586562135 339189.6952737749 348891.30105559365 381731.2542668763 305968.26399157266 362430.44828695554 0.9920098804954024 0.934753115292888 0.8751112933583831 0.9336060717168536 0.995089285600185 0.9358752744891354 0.9626434608478529 1.0532538203430395 0.8442123597444585 1.0 18.467344637733028 -5.613445062923277 9.793116318662777 0.9661959818230537 0.9291213747168919 0.06587521492883142 0.05680910813419435 0.8428753226687766 83.64271112242562 0.016268273957366554 0.021005269478656167 2.4353138410791607e-06 5.613445062923277 -0.03707460710616173 RSS(ph)QPS(ph)PTAVPASDS(ph)PPTKQEVK ddPTM_KYSE-520_SHP099_60min_R1 4 RSSQPSPTAVPASDSPPTKQEVK 23 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 3 RS(0.448)S(0.545)QPS(0.843)PT(0.164)AVPASDS(0.991)PPT(0.009)KQEVK;RS(0.133)S(0.867)QPS(0.844)PT(0.156)AVPASDS(0.973)PPT(0.027)KQEVK;RS(0.142)S(0.856)QPS(0.501)PT(0.501)AVPASDS(0.997)PPT(0.003)KQEVK;RS(0.471)S(0.529)QPS(0.979)PT(0.021)AVPAS(0.02)DS(0.518)PPT(0.462)KQEVK 171.15 8.6621e-11 2638300000.0 2392080.0 2334530.0 2233370.0 2009200.0 2022240.0 2012830.0 1926380.0 2296490.0 2743520.0 2022040.0 True False 2259386.553906742 2222375.674599029 2377336.6037183437 2200153.763911993 2181378.783028338 2000267.1813486225 2121117.2900570394 2288524.0121947974 2245365.92651106 2004126.2987233142 1.127367349725432 1.108900010949782 1.1862209508616175 1.0978119319693342 1.0884437694460367 0.9980744140840075 1.058375059200736 1.1419060832905854 1.1203714695732612 1.0 20.934541998416318 -5.561220791817222 3.5085978194516056 1.0712579486448783 1.1383836126636127 0.32427858216655236 0.046621882147794676 0.31981173757660164 8.238134833473866 0.014980476141092998 0.020693400218247435 2.7464975008972257e-06 5.561220791817222 0.06712566401873432 RSS(ph)QPS(ph)PTAVPASDSPPTK ddPTM_KYSE-520_SHP099_60min_R1 3 RSSQPSPTAVPASDSPPTK 19 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 RS(0.453)S(0.542)QPS(0.837)PT(0.168)AVPASDSPPTK;RS(0.498)S(0.552)QPS(0.832)PT(0.114)AVPAS(0.003)DS(0.001)PPTK;RS(0.448)S(0.552)QPS(0.953)PT(0.047)AVPASDSPPTK 136.71 2.4572999999999997e-06 695770000.0 972190.0 838070.0 930150.0 788710.0 914400.0 894650.0 831800.0 882690.0 997380.0 832280.0 True False 918260.682687283 797807.859231283 990108.9572926203 863668.7612656914 986358.0777756902 889066.1574964332 915886.4615856941 879628.1544113948 816280.9339037449 824906.6467040412 1.1131692129724533 0.9671492676401229 1.200267886370723 1.0469896984301512 1.1957208512220587 1.0777779049893037 1.11029104353222 1.0663366066039066 0.9895434073240157 1.0 19.65387133566482 -7.630176557042695 3.2072531221836744 0.993397142755704 1.1005427699672174 0.3041999110349972 0.06372633864685961 0.30659284457905295 5.919048586728146 0.05056014100835351 0.01606640921910694 2.343275991821748e-08 7.630176557042695 0.10714562721151344 RSS(ph)QPSPT(ph)AVPASDS(ph)PPTKQEVK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSQPSPTAVPASDSPPTKQEVK 23 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 3 RS(0.448)S(0.55)QPS(0.132)PT(0.869)AVPAS(0.001)DS(0.995)PPT(0.005)KQEVK 169.39 3.8929000000000006e-10 898100000.0 930800.0 891650.0 908190.0 846940.0 847040.0 843560.0 722240.0 904630.0 1181500.0 832990.0 True False 879166.6684962017 848813.7956060645 966733.3805553786 927432.9229582031 913697.2290016632 838295.0291373051 795251.0675831347 901492.0496722291 966969.3831912339 825610.3566564143 1.0648687500199023 1.0281045880330526 1.1709317509902484 1.1233300496788259 1.1066930321731745 1.015363993896905 0.9632280665709795 1.0919098124242568 1.1712176033102348 1.0 19.655101542827744 -6.239909157186773 23.445365629414642 1.0487685166182292 1.1002306149850092 0.13790674931735947 0.06300236040544444 833.3554657343325 907482.0117537006 0.022345953819382296 0.022315814001835767 5.755603166017673e-07 6.239909157186773 0.05146209836677995 RSS(ph)QPSPTAVPASDS(ph)PPTKQEVK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSQPSPTAVPASDSPPTKQEVK 23 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 RS(0.384)S(0.598)QPS(0.018)PTAVPAS(0.026)DS(0.968)PPT(0.006)KQEVK;RS(0.44)S(0.509)QPS(0.047)PT(0.002)AVPAS(0.003)DS(0.876)PPT(0.122)KQEVK 111.04 0.00019545 1338800000.0 1724730.0 1791280.0 1711620.0 1471050.0 1610610.0 1495480.0 1290700.0 1629250.0 2065700.0 1626470.0 True False 1629055.7887359867 1705224.2200339036 1821953.7638888285 1610858.1497126895 1737355.8438826606 1486146.1545998591 1421176.552018099 1623598.512019807 1690620.9520593614 1612060.741174512 1.0105424362292281 1.057791543755054 1.1302016836917652 0.9992540036295738 1.0777235618410144 0.921892157436379 0.881589952362875 1.0071571563965318 1.0487327858549622 1.0 20.62047467382299 -6.252081822702386 24.786568483123244 0.9666789534691224 1.056321497952843 0.36408073105399164 0.054770904698352475 669.8191066963924 1774236.508207091 0.019218340746728357 0.018968450781516703 5.596521510063608e-07 6.252081822702386 0.08964254448372067 RSS(ph)QPSPTAVPASDSPPTKQEVK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSQPSPTAVPASDSPPTKQEVK 23 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RS(0.109)S(0.887)QPS(0.002)PT(0.002)AVPASDSPPTKQEVK 202.69 1.0437000000000002e-15 642110000.0 266990.0 312130.0 369360.0 195270.0 181710.0 200920.0 134630.0 173720.0 379140.0 200070.0 True False 252179.5324686305 297134.8062833184 393169.5365968954 213828.40208993352 196009.54321152726 199665.98375251028 148239.7142621808 173117.4058665526 310297.7333416204 198297.53545210478 1.271722978773682 1.4984291438916344 1.9827252804756037 1.0783210270486692 0.9884618221030278 1.0069009849128256 0.7475620608405666 0.8730184440863412 1.5648088244473783 1.0 17.59730722152893 -5.410572684239551 7.823975953024134 1.0107711829221757 1.5743043826349497 0.4875418113729665 0.2569527882047985 0.2346710532619729 14.76141848288042 0.0734298303360934 0.10903314010084485 3.885324670793042e-06 5.410572684239551 0.5635331997127739 RSS(ph)RS(ph)S(ph)PELTR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSRSSPELTR 11 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 RS(0.249)S(0.753)RS(1)S(0.998)PELTR 121.42 0.005831 442440000.0 482980.0 511090.0 423270.0 466750.0 411940.0 485290.0 457950.0 464250.0 536970.0 435290.0 True False 456188.1366032396 486536.4692382694 450554.66145594494 511109.77966649487 444357.3343820189 482261.1251008143 504244.05516129907 462639.62510676426 439469.78391214355 431433.66925049573 1.0573772264824586 1.1277202126656005 1.0443196569212296 1.1846775439534327 1.0299551612510323 1.1178105916921552 1.168763801020195 1.0723308310880808 1.0186265357444366 1.0 18.718779243807887 -7.7003299239732526 3.344971771749402 1.0045941593529828 1.1045363300582784 0.38073116719029165 0.04787495003568146 0.2386542334937209 5.031310703707544 0.039389040116346696 0.011895100785465396 1.9937471336366587e-08 7.7003299239732526 0.09994217070529565 RSS(ph)RS(ph)SPELTR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSRSSPELTR 11 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RS(0.155)S(0.793)RS(0.567)S(0.407)PELT(0.078)R 111.88 0.0095234 77120000.0 257870.0 235860.0 206300.0 218240.0 206980.0 230960.0 220200.0 242840.0 289890.0 236330.0 True False 243565.43704889953 224528.93156692214 219598.42809167076 238981.4639837514 223268.14844489546 229518.49296973797 242459.9649449023 241997.64471928225 237253.2835322108 234236.30006195785 1.0398278874131552 0.9585573692358186 0.9375080977354269 1.0202580211544428 0.9531748426091037 0.9798587704340789 1.0351084135156217 1.0331346791905074 1.012880085065615 1.0 17.837605144901158 -6.750774977056668 24.68821427677117 1.0230420165465335 0.9789569575989735 0.27986125049252997 0.0301535894539262 211.84532336281197 490425.10162031185 0.011419084773303872 0.0087523099838933 1.7751089878187635e-07 6.750774977056668 -0.044085058947559985 RSS(ph)RSS(ph)PELTR ddPTM_KYSE-520_SHP099_60min_R1 4 RSSRSSPELTR 11 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 RS(0.415)S(0.565)RS(0.398)S(0.476)PELT(0.147)R;RS(0.442)S(0.559)RS(0.152)S(0.517)PELT(0.33)R;RS(0.375)S(0.625)RS(0.219)S(0.76)PELT(0.022)R;RS(0.445)S(0.543)RS(0.364)S(0.642)PELT(0.005)R 102.55 0.00098945 6062800000.0 2220340.0 2137560.0 1906730.0 1985690.0 1975270.0 2080720.0 1971370.0 2082080.0 2515580.0 2099730.0 True False 2097173.314061945 2034868.4090570277 2029640.8666758647 2174409.380580533 2130712.5112510794 2067733.4546761073 2170655.318317128 2074857.7504411265 2058814.0846112638 2081128.0257652204 1.0077098996784808 0.9777718544291943 0.9752599751423634 1.0448224970595037 1.0238257737496121 0.9935637928453787 1.0430186377020167 0.9969870785235385 0.9892779584544051 1.0 20.988934288100097 -5.229333830858158 24.99946901971418 1.0138284471004948 0.9859997025071394 0.2607337579871296 0.02013767196816944 888.1278893931045 691552.9979971823 0.0055224505761875525 0.009564746328699776 5.897475822901184e-06 5.229333830858158 -0.02782874459335538 RSS(ph)S(ph)PAELDLKDDLQQTQGK ddPTM_KYSE-520_SHP099_60min_R1 4 RSSSPAELDLKDDLQQTQGK 20 2 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 2 RS(0.553)S(0.602)S(0.832)PAELDLKDDLQQT(0.013)QGK;RS(0.375)S(0.626)S(0.998)PAELDLKDDLQQTQGK;RS(0.505)S(0.575)S(0.918)PAELDLKDDLQQT(0.001)QGK;RS(0.372)S(0.635)S(0.994)PAELDLKDDLQQTQGK 114.62 6.5968e-05 4096100000.0 4465990.0 4018340.0 3633150.0 3807660.0 3885970.0 3711640.0 3651730.0 3853700.0 4663220.0 3773430.0 True False 4218252.631969651 3825292.9147486934 3867348.66224553 4169538.861585282 4191773.7308552093 3688474.277997053 4020882.505850355 3840332.414160339 3816496.7982099317 3740000.3458841173 1.1278749309774403 1.022805497587304 1.0340503488192347 1.1148498598867438 1.1207950115481327 0.9862229777749169 1.0751021748635263 1.0268267537425866 1.0204535949869629 1.0 21.834606972860957 -7.237862038692345 0.7388421589865354 1.0027810860508375 1.074842570652208 0.27838782308031795 0.042303217759872065 0.997981479900772 1.0379540367308924 0.04014207747027297 0.019217256265208985 5.7827971899052815e-08 7.237862038692345 0.07206148460137052 RSS(ph)SEGLSK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSSEGLSK 9 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 RS(0.001)S(0.966)S(0.032)EGLSK;RSS(0.99)S(0.01)EGLSK 129.74 0.00051942 4971300000.0 13178800.0 10231600.0 8763700.0 10104600.0 10776100.0 11481400.0 11650000.0 9603700.0 11956700.0 12456800.0 True False 12447745.692713518 9740058.57805531 9328622.12441578 11064938.145941218 11624117.762378179 11409740.323790906 12827695.69304319 9570387.006220426 9785664.683878647 12346442.443243748 1.0082050558236073 0.7888959611507597 0.755571669110288 0.8962045704101753 0.9414953186566839 0.924131819853465 1.038979102847784 0.7751534136424504 0.7925898273015142 1.0 23.557592061578998 -4.230600546669513 23.047024578421368 0.8772062856450165 1.0082056932892625 0.14493788986820744 0.09386862752133658 8908.308919249894 6657201.01171643 0.024600044168773868 2.5443677618640272 5.880299592961796e-05 4.230600546669513 0.130999407644246 RSS(ph)SSGDQSSDSLNS(ph)PTLLAL ddPTM_KYSE-520_SHP099_60min_R1 3 RSSSSGDQSSDSLNSPTLLAL 21 1 P15408-3;P15408-2;P15408 P15408-3 FOSL2 Fos-related antigen 2 2 RS(0.331)S(0.387)S(0.126)S(0.147)GDQS(0.013)S(0.013)DS(0.134)LNS(0.845)PT(0.004)LLAL;RS(0.398)S(0.528)S(0.066)S(0.008)GDQSSDS(0.003)LNS(0.995)PT(0.002)LLAL;RS(0.433)S(0.554)S(0.011)S(0.003)GDQSSDSLNS(0.987)PT(0.012)LLAL 134.09 1.6003e-07 274080000.0 266083.0 322095.0 294876.0 337477.0 301702.0 398190.0 424930.0 470950.0 562900.0 431540.0 True False 251322.84556669 306621.0727255486 313884.17877828144 369550.71261384035 325444.230950439 395704.7485089196 467886.07131715387 469316.3843705568 460691.5495542493 427716.89133303956 0.5875915837305541 0.7168785683677843 0.7338596747956749 0.8640077586416656 0.7608870202346849 0.925155766646602 1.0939153463379045 1.0972594112611886 1.077094589644191 1.0 18.706296657478074 -6.069131560952464 0.7532181622181702 1.0932548073656745 0.6577516701884889 0.8587528236172581 0.06464228355755511 0.24557729976502016 0.3097659539042411 0.044103371518931164 0.05331087186315367 8.528417232935531e-07 6.069131560952464 -0.4355031371771856 RSS(ph)TLSQLPGDK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSTLSQLPGDK 12 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 RS(0.075)S(0.827)T(0.075)LS(0.023)QLPGDK;RS(0.053)S(0.472)T(0.472)LS(0.003)QLPGDK 124.39 0.00010821 687300000.0 839440.0 676470.0 654230.0 525840.0 576150.0 671810.0 618770.0 559120.0 793860.0 656530.0 True False 792874.5898178464 643971.3657978288 696402.7126050115 575815.6755004387 621489.727154926 667616.984594734 681321.3102132473 557180.5432195895 649715.035582052 650713.6549726109 1.2184692664106138 0.9896386234970497 1.070213768042602 0.8848987125138403 0.9550894197557375 1.025976601986068 1.0470370569400833 0.8562607207667122 0.9984653474182881 1.0 19.311663302879342 RSS(ph)TQLR ddPTM_KYSE-520_SHP099_60min_R1 3 RSSTQLR 7 1 P28908 P28908 TNFRSF8 Tumor necrosis factor receptor superfamily member 8 1 RS(0.248)S(0.733)T(0.019)QLR;RS(0.26)S(0.736)T(0.004)QLR;RS(0.001)S(0.996)T(0.003)QLR 145.23 0.00098081 1068260000.0 309490.0 286185.0 249181.0 336926.0 382302.0 384953.0 323882.0 326282.0 334549.0 292013.0 True False 292321.9727469807 272436.2430275575 265243.6059636965 368947.3457395041 412386.9923991714 382550.3655359353 356623.1533437094 325150.2038967912 273803.3348939856 289425.9920026762 1.010005945645261 0.9412984685391989 0.9164470824764208 1.2747553983890036 1.4248443601960885 1.3217553920741094 1.2321739000566745 1.1234312497192191 0.9460219277453625 1.0 18.14283496385838 -5.257978972827951 24.9515562698361 1.2112979848385614 0.9544552832204373 0.3682841459996591 0.13773450720678593 311.3948144779122 2245328.942102485 0.04091356044185853 0.06740621342021921 5.521041697800267e-06 5.257978972827951 -0.25684270161812417 RSS(ph)TSGDT(ph)EEEEEEEVVPFSSDEQK ddPTM_KYSE-520_SHP099_60min_R1 2 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 RS(0.132)S(0.445)T(0.445)S(0.199)GDT(0.779)EEEEEEEVVPFSSDEQK;RS(0.423)S(0.485)T(0.128)S(0.234)GDT(0.73)EEEEEEEVVPFSSDEQK 132.96 6.938600000000001e-07 1539800000.0 1579860.0 1573500.0 1393720.0 1476730.0 1498870.0 1458940.0 1534740.0 1729100.0 2034260.0 1537990.0 True False 1492222.0164271705 1497906.6981283468 1483561.421230847 1617077.9752049372 1616822.5415962914 1449834.2142936839 1689886.4968189793 1723102.1556749735 1664889.6635214582 1524364.6051381142 0.9789141071613694 0.9826433210790996 0.9732326611561738 1.060820993713917 1.0606534264483267 0.9511072412773075 1.1085841872232844 1.1303740259167543 1.092185988778329 1.0 20.539776584433817 -5.6225443384213385 0.6504350144791217 1.0809093624809334 0.9657285700682835 0.308764430480994 0.05061189538736188 1.1291801735182114 0.9668415007968157 0.033721570331558585 0.07626019217074685 2.384820309604917e-06 5.6225443384213385 -0.11518079241264989 RSS(ph)TSGDT(ph)EEEEEEEVVPFSSDEQKR ddPTM_KYSE-520_SHP099_60min_R1 2 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 2 RS(0.363)S(0.551)T(0.075)S(0.011)GDT(1)EEEEEEEVVPFSSDEQKR;RS(0.46)S(0.521)T(0.169)S(0.157)GDT(0.694)EEEEEEEVVPFSSDEQKR 171.23 7.2245e-10 2597700000.0 2441200.0 2474600.0 2148600.0 2074390.0 2193400.0 2312100.0 2110220.0 2412400.0 3208200.0 2213600.0 True False 2305781.7695884467 2355716.501549675 2287102.1938815485 2271539.401911905 2366008.1012611534 2297669.3262700527 2323541.6313625434 2404031.947458392 2625671.7521406 2193989.226154742 1.05095400747689 1.073713796525055 1.0424400296121779 1.035346652951929 1.0784046125002618 1.0472564308335388 1.0590487882362392 1.0957355299651028 1.1967569032881893 1.0 21.065125010556944 -7.31897152485223 4.3758944735019325 1.1118023389633946 1.0551892761424866 0.13359056586093987 0.04619771620174267 0.32645288230054464 13.013815584371981 0.024829987880357236 0.0115168887638727 4.797649040874351e-08 7.31897152485223 -0.056613062820908056 RSS(ph)TSSEPTPTVK ddPTM_KYSE-520_SHP099_60min_R1 9 RSSTSSEPTPTVK 13 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 RS(0.001)S(0.657)T(0.333)S(0.008)S(0.001)EPTPTVK;RSS(0.791)T(0.205)S(0.004)SEPTPTVK;RS(0.006)S(0.931)T(0.027)S(0.01)S(0.027)EPTPTVK;RS(0.011)S(0.831)T(0.158)SSEPTPTVK;RS(0.145)S(0.707)T(0.145)S(0.003)SEPTPTVK;RS(0.003)S(0.997)TSSEPTPTVK;RS(0.001)S(0.476)T(0.476)S(0.035)S(0.011)EPTPTVK;RSS(0.916)T(0.079)S(0.003)S(0.003)EPTPTVK;RS(0.212)S(0.712)T(0.067)S(0.006)S(0.002)EPTPTVK 296.25 2.2484e-34 48311500000.0 31104500.0 27508100.0 25552300.0 22018580.0 22793190.0 25452560.0 23978660.0 25606900.0 31511600.0 27144800.0 True False 29379071.379716493 26186569.585500095 27199442.14312553 24111219.22307253 24586884.37748913 25293701.131892223 26402656.9619697 25518075.640595414 25789887.782792144 26904318.190334838 1.09198349394599 0.9733221782556605 1.0109693897724088 0.896183989963897 0.9138638713513942 0.9401353698299176 0.9813538769198263 0.9484750908782583 0.958578009683849 1.0 24.6813344106665 -3.7673740613165916 1.197854484373151 0.9490120519327575 1.3598964903542443 0.5996502132806042 0.0332783718642853 2.9765761635329873 1.607872747951423 0.01010112022146042 2.0262381654679755 0.00017085430993063374 3.7673740613165916 0.4108844384214868 RSS(ph)VAQEDSK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSVAQEDSK 10 1 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 RS(0.316)S(0.683)VAQEDS(0.001)K 101.35 0.0016167999999999998 0.0 364020.0 277320.0 328040.0 288890.0 270770.0 321670.0 318130.0 336180.0 352430.0 380960.0 True False 343827.0849441204 263997.13093419326 349185.9832825582 316346.0187420545 292078.05852944375 319662.3382125722 350289.6850495988 335013.87004500197 288437.5960373143 377584.99078239495 0.9105952125683685 0.6991727356195067 0.92478777442665 0.8378140722345796 0.7735425550793954 0.846597047065348 0.9277108296168302 0.8872542029565814 0.7639011165132435 1.0 18.52644189232996 -6.534483848021309 23.81118060743774 0.8855829200086297 0.8259825616295781 0.12401276319053611 0.08097390029202928 295.6613857789488 606623.8004921243 0.029667066205972585 0.023003738736484706 2.9208963901366516e-07 6.534483848021309 -0.05960035837905164 RSS(ph)VNFVK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSVNFVK 8 1 Q5JX83;Q96MM6 Q5JX83 HSPA12B Heat shock 70 kDa protein 12B 1 RS(0.497)S(0.503)VNFVK 68.893 0.0353 376160000.0 1275100.0 1150600.0 1031400.0 1093500.0 1129700.0 1057600.0 1056900.0 1111600.0 1264100.0 1076300.0 True False 1204367.661151168 1095323.44891419 1097885.6942983489 1197425.911227236 1218600.9628862622 1050999.126103199 1163741.766349987 1107744.11904939 1034571.3053677855 1066764.819348728 1.1289907946968554 1.026771251776842 1.029173135807591 1.1224835029320503 1.1423332873221597 0.9852210225163274 1.0909075226725835 1.0384145586331581 0.9698213576253882 1.0 20.02481072172157 -7.574792423530676 4.0107966473872745 0.9861340084892898 1.0722430234279419 0.35678976279752206 0.047991981125712645 0.25703612595182834 8.522474198977921 0.03631952212837708 0.012723667034828046 2.6619970905246918e-08 7.574792423530676 0.08610901493865208 RSS(ph)VTVEER ddPTM_KYSE-520_SHP099_60min_R1 2 RSSVTVEER 9 1 Q9BQ89;V9GZ26 Q9BQ89 FAM110A Protein FAM110A 1 RS(0.226)S(0.774)VTVEER;RS(0.204)S(0.796)VTVEER 171.26 5.0971000000000004e-05 522660000.0 234250.0 202460.0 193951.0 156523.0 185057.0 195407.0 189562.0 179686.0 223410.0 164449.0 True False 221255.6855342021 192733.51770134462 206453.39179257228 171398.898859644 199619.9330697025 194187.39243045385 208724.7769068374 179062.71120502753 182844.37570778964 162992.10979938591 1.3574625532887954 1.1824714579040976 1.2666465391894086 1.0515778896942025 1.2247214501082222 1.1913913665481337 1.280582091757326 1.0985974193807397 1.1217989381991453 1.0 17.314442601906578 -13.999999994673821 0.05722685388090834 0.2466923145791148 1.5267626817884103 0.47440497641743395 0.07607031627311746 419.88134273290774 1.757802502496853 45.07084571252516 8.1324966878876 1.0000000122639795e-14 13.999999994673821 1.2800703672092955 RSS(ph)WECTGSGR ddPTM_KYSE-520_SHP099_60min_R1 2 RSSWECTGSGR 11 1 E9PPH6;Q8NEV8-2;Q8NEV8 E9PPH6 EXPH5 Exophilin-5 1 RS(0.156)S(0.843)WECT(0.001)GSGR;RSS(0.999)WECTGS(0.001)GR 183.39 1.1990999999999999e-06 1554410000.0 1466030.0 1417700.0 1410780.0 1186000.0 1212990.0 1357070.0 1223300.0 1341610.0 1622590.0 1232980.0 True False 1384706.3934416503 1349591.5639889168 1501721.136127812 1298717.0834160992 1308445.4120309863 1348600.0227504447 1346963.1022574883 1336956.268044127 1327968.5581652673 1222056.7564439247 1.1330949942709874 1.1043607891961638 1.2288472922466265 1.0627305782386482 1.0706911975499769 1.1035494183385963 1.102209938413196 1.094021420031709 1.0866668435511428 1.0 20.22087985966798 -13.999999791771144 0.08773715609850508 0.640062521617261 1.2045575222753568 0.4545500632051138 0.040570181028583834 213.19217753583942 1.3030166733988022 14.420093808431666 1.076371241740119 1.0000004794647756e-14 13.999999791771144 0.5644950006580959 RSS(ph)YLLAITTER ddPTM_KYSE-520_SHP099_60min_R1 1 RSSYLLAITTER 12 1 Q9P227;Q9P227-2 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 RS(0.193)S(0.807)YLLAITTER 186.98 6.4987e-08 401380000.0 227850.0 271130.0 224000.0 185500.0 190850.0 212030.0 229480.0 223770.0 265220.0 223830.0 True False 215210.70629228602 258104.50782557274 238439.398412672 203129.86422739146 205868.80921204115 210706.64212146483 252678.0779089743 222993.7940983108 217062.73365211938 221847.0403371048 0.9700859924264277 1.1634345332413423 1.0747918838599537 0.9156302645224751 0.9279763610964378 0.9497834264603588 1.1389743019560712 1.0051691190446512 0.9784342099957003 1.0 17.759205780718844 -5.129568582770733 9.936493630520216 0.9904539511077756 1.079724312926611 0.20503710949909892 0.07259234791371641 0.5859649055097912 44.00163780230639 0.020619177153697293 0.03577499104894933 7.420470061548959e-06 5.129568582770733 0.08927036181883541 RSSLFS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSLFSPR 8 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 RS(0.039)S(0.03)LFS(0.931)PR 46.955 0.059313 0.0 190140.0 203380.0 194420.0 177310.0 189730.0 186460.0 176910.0 175690.0 237980.0 173930.0 True False 179592.5551653072 193609.31952039627 206952.62428299873 194161.48908980476 204660.67158396964 185296.23397617487 194793.7892752162 175080.57239635446 194768.83098760044 172389.11551549236 1.0417859307896238 1.1230948017886713 1.2004970479960506 1.126297843742668 1.1872018193954774 1.0748720035025794 1.1299657097997604 1.0156126845526985 1.1298209310093992 1.0 17.395309161349047 -7.2407582828529 23.751849573556548 1.0545376115679304 1.1293503566408165 0.29977990224433027 0.054083243311184 529.1049435271626 607667.9636546186 0.025202634207411916 0.014526089799983407 5.744360896151382e-08 7.2407582828529 0.07481274507288616 RSSPS(ph)ARPPDVPGQQPQAAK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSPSARPPDVPGQQPQAAK 20 2 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 RS(0.321)S(0.221)PS(0.459)ARPPDVPGQQPQAAK 55.907 0.037370999999999995 1826100000.0 712800.0 638700.0 705610.0 643580.0 614630.0 577040.0 620120.0 631880.0 708080.0 616080.0 True False 673259.5630684287 608015.8932917545 751094.7496159169 704745.6497006179 662997.8842336759 573438.4793178806 682807.7813879782 629688.1557619008 579510.5212442224 610622.0105029865 1.1025799127578875 0.9957320287077677 1.2300486007656668 1.1541438690035086 1.0857746246119526 0.939105484988206 1.1182167849231808 1.0312241369144375 0.9490495122618711 1.0 19.2199200683562 -6.01398992798398 22.519606372608504 1.0159504604673393 1.119575801000476 0.36364888995768985 0.07095936977911842 220.60357159293505 355107.5168453235 0.02363501659539102 0.024626544575490572 9.68300312505977e-07 6.01398992798398 0.10362534053313666 RSSQPS(ph)PTAVPASDSPPTK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSQPSPTAVPASDSPPTK 19 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RS(0.354)S(0.213)QPS(0.409)PT(0.018)AVPAS(0.004)DS(0.003)PPTK 122.64 2.7493000000000003e-05 2641000000.0 1524500.0 1467600.0 1387700.0 1094400.0 1135200.0 1347400.0 1166400.0 1499100.0 1713300.0 1425100.0 True False 1439932.9459845936 1397094.2930874901 1477153.362398505 1198411.4469566406 1224533.7815955433 1338990.3768073462 1284311.0949670037 1493899.9719925702 1402207.9087782823 1412474.7227110215 1.0194397979886467 0.9891110054033313 1.0457910068389351 0.8484480661405959 0.8669420853388757 0.9479747533020387 0.9092630645467211 1.0576472258032807 0.9927313290867014 1.0 20.429793618978895 -9.386789855263858 9.281817588868542 1.0000019665090154 0.9616830061976809 0.023360597649200843 0.06787428668348994 0.0 0.0 0.0709927396199381 0.017218268476763332 4.1040263899280826e-10 9.386789855263858 -0.03831896031133453 RSSQPS(ph)PTAVPASDSPPTKQEVK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSQPSPTAVPASDSPPTKQEVK 23 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 RS(0.268)S(0.254)QPS(0.28)PT(0.197)AVPAS(0.001)DSPPTKQEVK 100.17 0.001332 672060000.0 144680.0 172870.0 148850.0 77910.0 78292.0 78061.0 65120.0 60519.0 176630.0 79937.0 True False 136654.31198757052 164565.06571684004 158445.10916842057 85314.54297550446 84453.13497945585 77573.79234374232 71702.96510995462 60309.07371424078 144558.4444799557 79228.82037004484 1.7248055865190863 2.077085900663737 1.999841830641797 1.076811980501991 1.0659395733144885 0.9791107829376662 0.9050111408330948 0.7612012072445633 1.8245689359602149 1.0 16.27373770179384 -5.264025039216892 24.321888876276734 1.0645496918145956 1.948228635567537 0.6590903904747685 0.2785510488720222 86.01007482197443 809054.5113915057 0.075765394038644 0.11851191093102546 5.444712604863881e-06 5.264025039216892 0.8836789437529413 RSSS(ph)DLITLPATTPPCPTK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSSDLITLPATTPPCPTK 19 1 H0Y507;Q5TCZ1-2;Q5TCZ1-3;Q5TCZ1 H0Y507 SH3PXD2A SH3 and PX domain-containing protein 2A 1 RS(0.309)S(0.309)S(0.378)DLIT(0.004)LPATTPPCPTK 105.73 0.00016389 751880000.0 970750.0 1040700.0 844180.0 917410.0 772580.0 933920.0 896400.0 996510.0 1153700.0 1142300.0 True False 916900.5623578524 990703.2098774529 898597.1935357562 1004600.3705706248 833377.6506211098 928091.0588599653 987016.8600209362 993053.3393971828 944217.1624102636 1132180.1106959514 0.8098539743771275 0.875040287775827 0.7936874928701833 0.8873149784914494 0.7360822211483934 0.8197379993625462 0.8717843130226133 0.8771160436538252 0.8339814076312054 1.0 20.110672054117916 -9.240250732020424 0.4873665913518812 1.0238631051662375 0.8240548999373555 0.5756868591612823 0.0435311972078285 4.422271346289624 1.1120320782648492 0.23834366728505002 0.022483608775371554 5.751078134371832e-10 9.240250732020424 -0.19980820522888199 RSSS(ph)LKER ddPTM_KYSE-520_SHP099_60min_R1 5 RSSSLKER 8 2 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 RS(0.137)S(0.137)S(0.726)LKER;RS(0.068)S(0.423)S(0.509)LKER;RS(0.016)S(0.316)S(0.669)LKER;RS(0.033)S(0.048)S(0.919)LKER;RS(0.093)S(0.093)S(0.813)LKER 94.465 0.0022804 55709200000.0 11857100.0 12717340.0 8572960.0 9517550.0 14958200.0 14698450.0 9760300.0 9191300.0 12828500.0 18386180.0 True False 11199363.02645715 12106379.8972835 9125586.718820993 10422095.090444246 16135325.239484169 14606711.521436807 10746966.375348454 9159417.525565553 10499167.780168213 18223292.7494316 0.6145630858510172 0.6643354778823443 0.5007649739427924 0.5719106439076067 0.885423148348832 0.8015407381244206 0.5897378988044661 0.5026214335414901 0.5761399942661675 1.0 24.11928032609982 RSST(ph)SGDTEEEEEEEVVPFSSDEQKR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQKR 26 2 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.291)S(0.291)T(0.347)S(0.069)GDT(0.003)EEEEEEEVVPFSSDEQKR 76.476 0.013241 612540000.0 263340.0 252150.0 218280.0 223380.0 226610.0 225170.0 212120.0 246660.0 312300.0 242320.0 True False 248732.00524472474 240036.33551513392 232350.67806034852 244609.9680383542 244442.9177654735 223764.6305074295 233563.1596917012 245804.39403087678 255594.1924423382 240173.23332210747 1.035635827540943 0.9994300038972705 0.9674295292878548 1.018473060694055 1.0177775199355366 0.9316801352602369 0.972477892149034 1.0234462459903562 1.0642076508981704 1.0 17.873715849855 -7.437127795897937 5.8554722017238054 1.035811490855197 0.9910912075399294 0.22653650486161914 0.03170039919536707 0.3090875259362189 16.540369586787968 0.018609031352306876 0.00862694826960373 3.65487227176693e-08 7.437127795897937 -0.04472028331526756 RSSTS(ph)GDTEEEEEEEVVPFSSDEQK ddPTM_KYSE-520_SHP099_60min_R1 1 RSSTSGDTEEEEEEEVVPFSSDEQK 25 1 O15231-3;O15231-2;O15231;O15231-6;H7BZT5;O15231-4;O15231-7;O15231-8;O15231-5 O15231-3;O15231-5 ZNF185 Zinc finger protein 185 1 RS(0.147)S(0.147)T(0.202)S(0.281)GDT(0.223)EEEEEEEVVPFSSDEQK 110.68 0.00025252 1007000000.0 616670.0 522410.0 471880.0 490210.0 506170.0 554690.0 572710.0 539880.0 686810.0 454840.0 True False 582462.0857988319 497312.6394466036 502298.1398346949 536799.4110129891 546002.6992866595 551227.9739581922 630605.1159109662 538007.2822889395 562102.6170711567 450810.4714601655 1.2920331772956595 1.1031523687456029 1.114211340760923 1.190742995109025 1.2111579784696846 1.2227488242958875 1.3988253508585318 1.193422327893905 1.2468712522371503 1.0 18.782161501367078 -5.772335080960009 2.5433996320607815 1.2342266075562958 1.162755634276566 0.006942868522174628 0.10338730565768706 0.741091523844824 9.823366393567959 0.03306193939306809 0.041510377706782495 1.6891371708703012e-06 5.772335080960009 -0.07147097327972984 RSSVS(ph)SGGAGR ddPTM_KYSE-520_SHP099_60min_R1 1 RSSVSSGGAGR 11 1 O14777;I3L4G3 O14777 NDC80 Kinetochore protein NDC80 homolog 1 RS(0.002)S(0.416)VS(0.517)S(0.066)GGAGR 82.85 0.0069831 178930000.0 338600.0 229630.0 213550.0 204110.0 166710.0 283440.0 241570.0 197550.0 250480.0 342640.0 True False 319817.1830176345 218598.23011834276 227315.77469208106 223508.55303209092 179829.12854985276 281670.9458232706 265990.2530960035 196864.74515851642 204999.14608695786 339604.4761698865 0.9417342981593876 0.6436847728973673 0.6693544715775972 0.6581437192844337 0.5295252011339615 0.8294088140415595 0.7832354157868708 0.5796883108809061 0.6036408836508016 1.0 18.37349594895067 -7.152166573980762 20.375998569307367 0.691290599969507 0.7113529785778897 0.0 0.1516102134292709 83.5249996702316 15423.589144067446 0.07015545349440243 0.04050420804627204 7.044228352289578e-08 7.152166573980762 0.02006237860838267 RST(ph)PLKER ddPTM_KYSE-520_SHP099_60min_R1 1 RSTPLKER 8 2 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 RS(0.024)T(0.976)PLKER 101.38 0.0019552 676010000.0 670510.0 668440.0 668820.0 528000.0 602970.0 563750.0 506280.0 451390.0 638620.0 499410.0 True False 633315.4736714531 636327.1390511051 711933.207349837 578180.9612510111 650420.3085699995 560231.4271375549 557459.723216644 449824.2334452179 522662.7063001157 494985.61593510024 1.2794623788714092 1.2855467281589386 1.4382906986193749 1.168076288759912 1.3140186050482707 1.1318135499335586 1.1262139853569706 0.9087622326063639 1.0559149386850957 1.0 18.91702707615307 -6.606942487796901 1.1620084284979146 0.9836920349118078 1.3098924806559717 0.7535745286131537 0.07554405754034374 0.222718500480284 0.6122934386666656 0.044896945618647405 0.02947723104911645 2.4720514890646695e-07 6.606942487796901 0.32620044574416396 RST(ph)S(ph)PIIGSPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 RS(0.094)T(0.72)S(0.73)PIIGS(0.456)PPVR 101.75 0.005592 475430000.0 388740.0 446930.0 456130.0 316700.0 415170.0 384880.0 367790.0 351390.0 458260.0 381520.0 True False 367175.8172660227 425458.81194439356 485532.869633804 346799.0727806731 447841.51700583263 382477.82115601323 404969.80248449434 350171.11010504275 375051.5357945114 378140.0296180687 0.9710048884189274 1.1251356074999996 1.284002833881948 0.9171181192611351 1.184327185508935 1.0114713894276832 1.0709519510365628 0.9260355494728361 0.9918324070935394 1.0 18.528561054453984 -6.8541035594941615 1.5016777519021418 0.9716415338194145 1.0975251993379633 0.18288466978588735 0.10126014699929374 0.6525012581742056 2.950586010966378 0.06162782433055346 0.03374902737681914 1.39925362439844e-07 6.8541035594941615 0.1258836655185488 RST(ph)SPIIGS(ph)PPVR ddPTM_KYSE-520_SHP099_60min_R1 4 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 RS(0.07)T(0.548)S(0.405)PIIGS(0.976)PPVR;RS(0.265)T(0.595)S(0.14)PIIGS(1)PPVR;RS(0.338)T(0.497)S(0.166)PIIGS(0.999)PPVR;RS(0.396)T(0.586)S(0.018)PIIGS(1)PPVR 161.24 2.9529e-06 4221940000.0 2946340.0 2954390.0 3006820.0 2547430.0 2989940.0 3000260.0 2453490.0 2349930.0 3280710.0 2753550.0 True False 2782900.6468168274 2812456.669770201 3200644.428282098 2789536.981287243 3225231.2675685105 2981534.26445006 2701512.712954897 2341778.641307788 2685015.7639689515 2729155.689229483 1.019692888097021 1.0305226194568022 1.1727599275165315 1.0221245318821688 1.1817688819647676 1.0924749644062377 0.9898712351282567 0.8580597473971658 0.9838265272169235 1.0 21.380023267224058 -6.886062514047682 4.032132700221445 0.9379637187757378 1.0892021428445626 0.49687668922258643 0.06400747332024613 0.1724054607623758 5.122494141601723 0.027899587260508382 0.018280933754345103 1.299982440003995e-07 6.886062514047682 0.15123842406882482 RSTS(ph)PIIGS(ph)PPVR ddPTM_KYSE-520_SHP099_60min_R1 7 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 RS(0.088)T(0.029)S(0.883)PIIGS(1)PPVR;RS(0.262)T(0.292)S(0.446)PIIGS(1)PPVR;RS(0.26)T(0.297)S(0.443)PIIGS(1)PPVR;RS(0.256)T(0.294)S(0.451)PIIGS(1)PPVR;RS(0.244)T(0.286)S(0.47)PIIGS(1)PPVR;RS(0.288)T(0.331)S(0.381)PIIGS(1)PPVR;RS(0.291)T(0.331)S(0.378)PIIGS(1)PPVR 83.213 0.0039321 7665500000.0 4119670.0 4531940.0 4339330.0 3729930.0 4134480.0 4053320.0 3487800.0 3684300.0 4848620.0 4044950.0 True False 3891143.6927414574 4314218.799819376 4619050.154973482 4084421.4257556545 4459840.054026728 4028021.726377284 3840380.8616477246 3671520.0232220828 3968232.831763592 4009114.889923485 0.9705742538138439 1.0761025608576946 1.152137137946086 1.0187838308204749 1.112425105410697 1.0047159627431281 0.9579123988938664 0.9157931673273036 0.9898027222261337 1.0 21.934852330975456 -6.5042560903137625 4.096479546578009 0.9601848149650581 1.068644797912516 0.4650986462932504 0.05059343819772573 0.18217088531021128 7.026946665336772 0.019242553596302045 0.015764445217826255 3.131438665171498e-07 6.5042560903137625 0.10845998294745784 RSTSLS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 RSTSLSSPR 9 1 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 RS(0.013)T(0.101)S(0.155)LS(0.628)S(0.101)PR 56.358999999999995 0.0334 385180000.0 362710.0 346020.0 289610.0 270580.0 317520.0 309320.0 256670.0 275390.0 317520.0 339960.0 True False 342589.75325554115 329396.6798133914 308278.72399238346 296295.8418471565 342507.01755833067 307389.41914357216 282616.70845780225 274434.73636650917 259866.37202783002 336948.21888487745 1.01674303069277 0.9775884285826538 0.9149142411633009 0.8793512630152519 1.0164974864442078 0.912274948835968 0.8387541248715185 0.8144715448407615 0.7712353336897044 1.0 18.36216737415888 -6.621851478115359 3.883757443885691 0.8408148902958439 0.9556923025708568 0.3330569436902657 0.06815856404208642 0.24268807143108823 6.926505530286372 0.026940659272728314 0.020404858971390657 2.3886280164767665e-07 6.621851478115359 0.11487741227501291 RSTSPIIGS(ph)PPVR ddPTM_KYSE-520_SHP099_60min_R1 1 RSTSPIIGSPPVR 13 1 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 RSTSPIIGS(1)PPVR 54.103 0.046267 0.0 297360.0 271040.0 264640.0 301170.0 250840.0 254080.0 252980.0 255290.0 332340.0 247820.0 True False 280864.84802753653 258018.8315606656 281699.1178389712 329793.1062499374 270579.68091563246 252494.19247380926 278553.6872468727 254404.4585751342 271995.4336096273 245624.50760104245 1.1434724114897097 1.0504604531554105 1.1468689366149212 1.3426718264840511 1.101598873656059 1.0279682387554134 1.1340630866497887 1.0357454191352626 1.1073627638631973 1.0 17.906094989666595 -5.988359777252977 24.992567836108986 1.0674885365493811 1.1682513007657127 0.31281077502982024 0.07649490777487113 313.8176109639742 673789.8742246346 0.02484336745793041 0.028148372166356392 1.027165023842651e-06 5.988359777252977 0.10076276421633157 RSVICDIS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 1 RSVICDISPLR 11 1 Q9UGU0;Q9UGU0-2 Q9UGU0 TCF20 Transcription factor 20 1 RSVICDIS(1)PLR 76.85 0.0096666 0.0 178230.0 155390.0 153670.0 132140.0 153430.0 144340.0 121850.0 139170.0 167280.0 150370.0 True False 168343.22660730354 147924.83115485465 163575.81408069326 144698.54587066016 165504.06810271656 143439.12051979554 134167.78714140033 138687.2517525223 136906.16878563658 149037.8387860897 1.1295334659872678 0.9925320466245319 1.0975455321481784 0.9708846226517172 1.1104835486796103 0.962434249504048 0.9002263333539613 0.9305506097117837 0.9186000676119209 1.0 17.185319133302983 -6.435300001434722 5.668989563250672 0.9314090383715689 1.053088132630599 0.5589313952231425 0.052379150222380766 0.16159483078271683 8.18846056502785 0.017351146977471484 0.015133391597448158 3.670286772685918e-07 6.435300001434722 0.12167909425903012 RSVVS(ph)FDK ddPTM_KYSE-520_SHP099_60min_R1 5 RSVVSFDK 8 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 RSVVS(1)FDK;RSVVS(1)FDK;RSVVS(1)FDK;RSVVS(1)FDK;RSVVS(1)FDK 114.24 0.00067295 3944600000.0 3012460.0 2541970.0 2465040.0 2575000.0 2583010.0 2625160.0 2581280.0 2830570.0 3115820.0 2608090.0 True False 2845352.8386098742 2419849.945625241 2623940.4226034502 2819727.225798018 2786278.191683493 2608775.402686341 2842220.973265109 2820751.4133300013 2550065.6314303107 2584984.3516633185 1.10072342866564 0.9361178314554124 1.0150701380126597 1.0908101722099992 1.0778704288444343 1.0092035570767437 1.0995118680065783 1.0912063786827095 0.9864917092397332 1.0 21.301724116461653 -5.088064594487359 9.048398998763721 1.0558333375163191 1.007835184676311 0.06341883043844376 0.05361014763151035 0.7258191878909487 69.51577125632943 0.013964409023230269 0.02427015508079065 8.164609265799152e-06 5.088064594487359 -0.04799815284000819 RSVVS(ph)FDKVK ddPTM_KYSE-520_SHP099_60min_R1 1 RSVVSFDKVK 10 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 RS(0.007)VVS(0.993)FDKVK 76.58800000000001 0.011584 1046700000.0 987070.0 914810.0 807710.0 809750.0 794160.0 843680.0 721740.0 769890.0 1162400.0 825970.0 True False 932315.2594247389 870861.1544421946 859776.2789816932 886708.3965397858 856655.8738477052 838414.2801727948 794700.522703604 767219.4312836775 951337.4617194163 818652.5483949371 1.1388412107830737 1.063773827064508 1.0502334362329708 1.0831315413092895 1.0464218007105432 1.024139339475096 0.9707421350629228 0.9371734477439786 1.162077200620243 1.0 19.642891749177263 -6.0312003533950085 2.128508199865996 1.0113561827127273 1.0810310435215917 0.20865992023714353 0.05892686311970378 0.5047998582220168 4.5730025046652685 0.021416221410387706 0.022966426603162247 9.306784258487622e-07 6.0312003533950085 0.06967486080886443 RSYS(ph)PDGK ddPTM_KYSE-520_SHP099_60min_R1 5 RSYSPDGK 8 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 RS(0.001)YS(0.998)PDGK;RS(0.017)Y(0.008)S(0.975)PDGK;RS(0.078)Y(0.003)S(0.919)PDGK;RS(0.247)Y(0.001)S(0.752)PDGK;RS(0.162)Y(0.004)S(0.835)PDGK 108.31 0.0013767 10429410000.0 4186670.0 3763000.0 3711610.0 3538880.0 3727900.0 3722540.0 3563080.0 3602000.0 4228990.0 3602140.0 True False 3954427.0691802716 3582219.8316218434 3950866.3193859677 3875214.0911969305 4021264.5211504805 3699306.2470538947 3923270.8987097233 3589505.5027131173 3461112.020162422 3570227.842022512 1.1076119632017976 1.0033588863596274 1.1066146179476954 1.0854248699717846 1.1263327437591375 1.036154108573155 1.0988853015294437 1.0053995603484187 0.9694372945682155 1.0 21.767584715306054 -7.37539459971813 4.482671701257134 0.9856279281280763 1.0787786651857123 0.5757713185813136 0.03518895943140843 0.1648038655464358 5.3075136536454135 0.020176968242971306 0.009124064849944033 4.213135242401798e-08 7.37539459971813 0.09315073705763599 RSYS(ph)PDGKES(ph)PSDKK ddPTM_KYSE-520_SHP099_60min_R1 5 RSYSPDGKESPSDKK 15 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 RS(0.093)Y(0.044)S(0.863)PDGKES(0.625)PS(0.375)DKK;RS(0.294)Y(0.003)S(0.703)PDGKES(0.886)PS(0.114)DKK;RS(0.002)Y(0.004)S(0.993)PDGKES(0.959)PS(0.041)DKK;RS(0.009)YS(0.991)PDGKES(0.63)PS(0.37)DKK;RS(0.396)Y(0.047)S(0.557)PDGKES(0.602)PS(0.398)DKK 166.27 6.3865e-08 11816200000.0 7017880.0 6241600.0 5956440.0 6356290.0 5824500.0 5860060.0 5653400.0 5955390.0 7206260.0 5248760.0 True False 6628584.206603058 5941744.167167396 6340401.653040963 6960389.890511728 6282855.013128287 5823485.191861117 6224900.843866992 5934732.142088477 5897784.839031455 5202260.069873492 1.2741739393210019 1.1421466991964295 1.2187782940261862 1.3379550035992318 1.2077164403049678 1.1194144686431895 1.1965762496026786 1.140798818662827 1.1336966548800158 1.0 22.310707093199106 -8.101696030352445 0.4225156942539495 0.988116152129819 1.238156512640091 0.6139110979565918 0.054689199696462965 1.0310902633890253 0.45807014647731314 0.08913698325502925 0.042896559044478984 7.912322303209166e-09 8.101696030352445 0.2500403605102721 RSYS(ph)PDGKESPSDKK ddPTM_KYSE-520_SHP099_60min_R1 1 RSYSPDGKESPSDKK 15 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 RS(0.401)YS(0.495)PDGKES(0.098)PS(0.006)DKK 112.56 0.00024062 1344200000.0 782910.0 913010.0 1011200.0 657820.0 636090.0 692000.0 506460.0 488770.0 1083100.0 454920.0 True False 739480.4216076073 869147.6291440498 1076383.5699772052 720339.0150192061 686146.664142978 687680.9713156329 557657.9193732752 487074.57094977604 886436.3427290944 450889.7627224041 1.6400470419703843 1.927627772908988 2.3872433108220608 1.597594522150843 1.5217614611609906 1.5251643043823382 1.2367943685530165 1.0802520066299433 1.965971321630649 1.0 18.782415228951425 -5.487438029657497 5.272097667153453 1.4028927608662756 1.9855106725414724 0.4333854757481006 0.3043736782206526 0.18567240459170753 13.517644258037892 0.08713098633785567 0.12602363825133875 3.2550822760010046e-06 5.487438029657497 0.5826179116751968 RSYS(ph)SPDITQAIQEEEK ddPTM_KYSE-520_SHP099_60min_R1 1 RSYSSPDITQAIQEEEK 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.099)YS(0.86)S(0.041)PDITQAIQEEEK 206.85 8.8386e-14 437350000.0 502890.0 505390.0 485690.0 486240.0 443210.0 452650.0 463290.0 451160.0 547160.0 468300.0 True False 474993.689213639 481110.3057941445 516998.3545314757 532452.1034066133 478088.1054800562 449824.84344800736 510123.8744746759 449595.0312615351 447809.53678113926 464151.2263318869 1.0233597635137979 1.0365378318533864 1.1138575645210103 1.1471522064360302 1.0300265912433546 0.9691342345530386 1.0990467018822798 0.9686391110384711 0.9647923163321287 1.0 18.824235404646053 -5.988419543674488 24.91966410832547 1.0039824244924205 1.0806435337479285 0.37281750447795836 0.0487911937965197 255.3039282677706 549378.3031088178 0.015981910517691447 0.01810935748460715 1.0270236779210061e-06 5.988419543674488 0.07666110925550806 RSYS(ph)SPDITQAIQEEEKR ddPTM_KYSE-520_SHP099_60min_R1 5 RSYSSPDITQAIQEEEKR 18 2 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.032)YS(0.898)S(0.07)PDITQAIQEEEKR;RS(0.039)YS(0.871)S(0.09)PDITQAIQEEEKR;RS(0.006)YS(0.763)S(0.231)PDITQAIQEEEKR;RS(0.033)YS(0.924)S(0.043)PDITQAIQEEEKR;RS(0.003)YS(0.987)S(0.01)PDIT(0.001)QAIQEEEKR 255.47 6.8856000000000005e-25 6260670000.0 1844848.0 1793376.0 1659084.0 1436893.0 1568556.0 1634306.0 1414410.0 1454461.0 2002080.0 1533810.0 True False 1742510.603826688 1707219.525047746 1766031.2092682552 1573454.878702367 1691992.4333371911 1624105.6900389697 1557392.36611135 1449415.8142647494 1638552.7403296698 1520221.6366861248 1.14622142046677 1.123006990460451 1.1616932469912489 1.0350167638268084 1.1129906274887016 1.0683348077976957 1.0244508619850012 0.9534240135038977 1.0778380604432722 1.0 20.535850242228538 -5.980892962472584 0.6173353702254883 1.0027461713258885 1.1510676103932824 0.597037452115498 0.04051111694731948 0.5938259520440604 0.4953716292620122 0.029782066098258578 0.044383804799341266 1.0449777358487388e-06 5.980892962472584 0.14832143906739392 RSYSS(ph)PDITQAIQEEEK ddPTM_KYSE-520_SHP099_60min_R1 1 RSYSSPDITQAIQEEEK 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 RS(0.294)YS(0.294)S(0.41)PDIT(0.001)QAIQEEEK 119.79 6.9046e-05 463150000.0 473690.0 385320.0 400460.0 438520.0 410050.0 401970.0 439120.0 467380.0 491520.0 425550.0 True False 447413.4714223956 366808.648822889 426274.2923586545 480196.8089541546 442318.60213464795 399461.1561267991 483510.53499820875 465758.7678673119 402272.35821088107 421779.95807289035 1.060774612114394 0.8696682756071084 1.0106556373761777 1.1385007745464493 1.0486951636004673 0.9470842520634084 1.1463573025313127 1.104269557983173 0.9537493437309364 1.0 18.686131017942504 -4.9970510887958115 24.97684480690054 1.054289690228168 0.9589565583812839 0.15006228577194125 0.07809307849228277 139.83622246037018 1184340.9432200412 0.019966870690229177 0.041216039681335644 1.006813224103113e-05 4.9970510887958115 -0.09533313184688408 RT(ph)ASPPPPPK ddPTM_KYSE-520_SHP099_60min_R1 1 RTASPPPPPK 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.6)AS(0.4)PPPPPK 69.71600000000001 0.043249 1287800000.0 2073200.0 1870600.0 1823500.0 1592700.0 1494500.0 1820900.0 1717700.0 1670300.0 2140600.0 1940500.0 True False 1958195.4631782623 1780733.5681721587 1941045.727703157 1744069.7291372854 1612108.6474581896 1809535.0876714403 1891341.879136506 1664506.1191509508 1751921.000134708 1923308.6796861538 1.0181389414297248 0.9258698756887737 1.0092221535754196 0.906806976726109 0.838195482859909 0.9408448611414373 0.983379266735871 0.8654388849441295 0.9108891456885574 1.0 20.875158894619798 -5.274491823701796 24.445236163173895 0.9151884280549486 0.9785562792424859 0.23731991348218273 0.05126007291366037 803.3600078926971 1504569.2882590268 0.01437390500548032 0.02148085483637573 5.315060058753096e-06 5.274491823701796 0.0633678511875373 RT(ph)ESDSGLKK ddPTM_KYSE-520_SHP099_60min_R1 1 RTESDSGLKK 10 2 Q12802-2;Q12802;Q12802-4;A8MYJ1;A0A087WTD7 Q12802-2 AKAP13 A-kinase anchor protein 13 1 RT(0.5)ES(0.5)DS(0.001)GLKK 107.65 0.0022506999999999996 408020000.0 624650.0 578580.0 523170.0 618090.0 607680.0 543190.0 570250.0 730070.0 806980.0 575560.0 True False 589999.4192910967 550784.1483337141 556894.3753015969 676833.087764465 655500.9587737656 539799.7497239 627896.4351036808 727537.5575696197 660452.7743103369 570460.9861789048 1.0342502530156628 0.9655071278809245 0.9762181617919562 1.1864669173926654 1.1490723724412437 0.9462518258077881 1.1006825187283946 1.2753502433932502 1.1577527478859166 1.0 19.12176869842519 -5.246639247296076 24.261531983008627 1.121586951577311 0.989343353978238 0.29153673566994354 0.08867684840420743 715.7383344056186 1173290.0157972737 0.025604591084451248 0.04409308266154601 5.667098389241606e-06 5.246639247296076 -0.1322435975990729 RT(ph)GSNISGASSDISLDEQYK ddPTM_KYSE-520_SHP099_60min_R1 1 RTGSNISGASSDISLDEQYK 20 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 RT(0.408)GS(0.408)NIS(0.136)GAS(0.024)S(0.024)DISLDEQYK 92.426 0.0026361 706370000.0 442210.0 302100.0 266320.0 340440.0 385930.0 356010.0 320770.0 365710.0 505250.0 343230.0 True False 417679.7297762197 287586.66253865557 283487.41332706634 372795.315242982 416300.4953586748 353788.00953479554 353196.56201351626 364441.4373673557 413509.3363160142 340189.24922889896 1.2277863886732665 0.8453725777358433 0.8333226695718408 1.0958468443314733 1.2237320735511068 1.0399741036400199 1.0382355198293325 1.0712902838447387 1.2155273491249607 1.0 18.375978023641437 -5.383490175435613 10.432438922172784 1.1015418808540265 0.9566007820376712 0.1885928225272866 0.1216808732699364 0.6261460253411516 50.53720303743275 0.03424252082310246 0.050800326385632644 4.135326691346221e-06 5.383490175435613 -0.1449410988163553 RT(ph)GTPSDPR ddPTM_KYSE-520_SHP099_60min_R1 3 RTGTPSDPR 9 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12 O60716-5 CTNND1 Catenin delta-1 1 RT(0.881)GT(0.091)PS(0.029)DPR;RT(0.918)GT(0.082)PSDPR;RT(0.497)GT(0.497)PS(0.005)DPR 89.561 0.010933 6362760000.0 2293780.0 2191070.0 2100040.0 1807990.0 2122720.0 1893650.0 1739700.0 1723920.0 2408320.0 1807410.0 True False 2166539.4508629325 2085807.708336882 2235411.9385828013 1979820.8260079843 2289765.98737534 1881831.027936199 1915565.8538358163 1717940.123885952 1971029.7968066984 1791397.7535437008 1.2094128434498341 1.1643465021717183 1.2478590721467424 1.1051821529258645 1.2782007696759576 1.0504819625979798 1.0693135290844755 0.9589942381515011 1.1002747954258922 1.0 20.772654271446616 -6.369011741015011 6.464875496630904 1.0333324035513076 1.1959167245140556 0.684807247307631 0.05604220159464713 0.13914107324994449 7.248545991324539 0.018534193108827264 0.016294522994927493 4.2755132727939984e-07 6.369011741015011 0.162584320962748 RT(ph)KSDTEPQK ddPTM_KYSE-520_SHP099_60min_R1 2 RTKSDTEPQK 10 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 RT(0.499)KS(0.499)DT(0.002)EPQK;RT(0.551)KS(0.443)DT(0.006)EPQK 141.38 0.00018373 1261250000.0 486520.0 493460.0 341670.0 425310.0 676740.0 1193800.0 1050960.0 1337920.0 1781570.0 2903310.0 True False 459531.7657464247 469753.44090143923 363694.59489132854 465731.3345258855 729995.5878761163 1186349.0513823733 1157201.293181173 1333279.0677928745 1458081.7977249317 2877588.9321409985 0.15969333236367486 0.16324549891562548 0.12638865504001318 0.16184776405133366 0.25368306769687954 0.41227189823103044 0.40214266890447975 0.4633320113588571 0.5067026014171114 1.0 21.45642908498878 -8.562872674320213 0.23599987198453307 1.254761915670342 0.021028615865615698 0.9729318006369224 0.04129659142137553 0.822849691571904 0.10449415295829224 0.3064204561021949 0.11492630396751524 2.7360707650662696e-09 8.562872674320213 -1.2337332998047263 down RT(ph)LSDISNASSSFGWLSLDGDPTTNVTEGSQVPERPPKPFPR ddPTM_KYSE-520_SHP099_60min_R1 1 RTLSDISNASSSFGWLSLDGDPTTNVTEGSQVPERPPKPFPR 42 3 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39;A0A0U1RRJ5 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 RT(0.475)LS(0.475)DIS(0.041)NAS(0.004)S(0.004)S(0.001)FGWLSLDGDPTTNVTEGSQVPERPPKPFPR 108.29 5.4377e-05 514620000.0 64643.0 59712.0 67210.0 52267.0 46826.0 52992.0 31421.0 49186.0 69846.0 42147.0 True False 61057.12392737428 56843.34589046075 71542.46413980215 57234.43996535341 50510.939796505314 52661.25727161564 34597.34131940858 49015.38524609871 57163.72707437581 41773.6103698698 1.4616195101827534 1.3607477397132126 1.71262343633587 1.3701099679580269 1.20915906835138 1.2606345682201032 0.82821046620291 1.1733576488148656 1.3684172033070547 1.0 15.35030421631364 -5.773309925831483 2.1689966591443413 1.1234004208753106 1.5014491381498973 0.5323571746532283 0.15914366929540905 0.25344580179316384 2.449887566755204 0.055140623391408065 0.07032117711392899 1.6853498788942714e-06 5.773309925831483 0.3780487172745868 RT(ph)NSTGGSSGSSVGGGSGK ddPTM_KYSE-520_SHP099_60min_R1 1 RTNSTGGSSGSSVGGGSGK 19 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 RT(0.453)NS(0.453)T(0.094)GGSSGSSVGGGSGK 107.75 0.00029742 782300000.0 458000.0 473520.0 444860.0 368780.0 352090.0 375310.0 359520.0 378110.0 479090.0 416830.0 True False 432593.82699963526 450771.3884319899 473536.3874011665 403828.74032225006 379797.4798819363 372967.55107582384 395863.79017707147 376798.4246615372 392099.3328760801 413137.21048883296 1.0470948053499727 1.0910936536039137 1.1461964097614639 0.9774688168234256 0.9193010705391355 0.9027692050167074 0.9581896283529552 0.9120418473458276 0.949077746863178 1.0 18.656261481302487 -5.423657619954891 4.685274683345654 0.935718025002695 1.0933748789732225 0.8007812984762303 0.034430261945604876 0.08945429245750416 3.204514558113208 0.009703562293465293 0.014513768675851687 3.7700089397839153e-06 5.423657619954891 0.15765685397052753 RT(ph)PDLPEEEYVKEEIQENEEAVKK ddPTM_KYSE-520_SHP099_60min_R1 2 RTPDLPEEEYVKEEIQENEEAVKK 24 3 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 RT(1)PDLPEEEYVKEEIQENEEAVKK;RT(1)PDLPEEEYVKEEIQENEEAVKK 251.27 4.4771e-29 238250000.0 336160.0 279590.0 270080.0 311680.0 301450.0 288360.0 291560.0 318270.0 367210.0 237180.0 True False 317512.53468165366 266158.0767268544 287489.78894327884 341301.97348999075 325172.39998412237 286560.2382782894 321033.73015138815 317165.99565477675 300533.920610794 235078.7697232478 1.350664439223725 1.1322080553688256 1.2229508827263864 1.4518621732272838 1.3832486887988205 1.218996673394409 1.3656432289880236 1.3491902991842613 1.2784392268370506 1.0 17.842784727600396 -8.048740645645887 20.262284042833006 0.9999999988136976 1.3070885382410078 0.517495850038219 0.0890406357618608 889.2032428284897 369657.2882964039 0.09115103895773556 0.023535097072949256 8.938391121097765e-09 8.048740645645887 0.3070885394273102 RT(ph)PDYFL ddPTM_KYSE-520_SHP099_60min_R1 2 RTPDYFL 7 1 P67775;P62714;H0YBN9;P67775-2 P67775 PPP2CA;PPP2CB Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform;Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform 1 RT(1)PDYFL;RT(1)PDYFL 108.3 0.0038988 295220000.0 563260.0 504400.0 466890.0 442850.0 495850.0 490000.0 472810.0 498040.0 594020.0 507150.0 True False 532014.8449690271 480167.86688016466 496986.47645041265 484938.33085229294 534870.5739994274 486941.728243729 520606.24898092233 496312.41548341006 486160.94202560914 502657.0455567297 1.058405228120858 0.9552593982808762 0.9887188110532968 0.964749892872163 1.064086495409646 0.9687355077345133 1.0357086478402238 0.9873778152929449 0.9671821897714575 1.0 18.939214883561522 -4.235963172030947 23.581859962657166 0.9939010470848466 1.0584054054143621 0.2713107687587063 0.0323583796921311 5103.3430957381415 4723713.970942687 0.007816305528225584 0.5003743408122282 5.8081366816062403e-05 4.235963172030947 0.06450435832951551 RT(ph)PS(ph)DDEEDNLFAPPK ddPTM_KYSE-520_SHP099_60min_R1 5 RTPSDDEEDNLFAPPK 16 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 2 RT(1)PS(1)DDEEDNLFAPPK;RT(1)PS(1)DDEEDNLFAPPK;RT(1)PS(1)DDEEDNLFAPPK;RT(1)PS(1)DDEEDNLFAPPK;RT(1)PS(1)DDEEDNLFAPPK 164.19 6.3317e-08 900900000.0 1540609.0 1446047.0 1360435.0 1375902.0 1358608.0 1432169.0 1277886.0 1402258.0 1678750.0 1395785.0 True False 1455148.3476420983 1376576.7315592011 1448130.8168729607 1506667.3123999797 1465522.7201779042 1423230.302034885 1407067.1878455088 1397393.8942874782 1373931.317843659 1383419.4308042964 1.0518490020023066 0.9950537782737973 1.0467764039074123 1.0890893093239475 1.0593480816774956 1.0287771519931908 1.0170937002290505 1.0101013930930964 0.9931415500249833 1.0 20.399807194360736 -6.8069856571084095 1.8501570793697903 1.001463087800135 1.0471494857744208 0.4664551395126152 0.022092444124335236 0.3703882072692012 2.5856780484900868 0.01333719240079993 0.00804685195727023 1.559604009034796e-07 6.8069856571084095 0.045686397974285864 RT(ph)PSEADR ddPTM_KYSE-520_SHP099_60min_R1 2 RTPSEADR 8 1 G3V3Z8;P49757-3;P49757;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5;P49757-4;P49757-2 G3V3Z8 NUMB Protein numb homolog 1 RT(0.635)PS(0.365)EADR;RT(0.637)PS(0.363)EADR 77.062 0.017249 1633590000.0 975780.0 829900.0 923510.0 773410.0 802540.0 901530.0 775570.0 729140.0 906510.0 882230.0 True False 921651.5382307955 790030.3582947036 983040.9322682443 846914.6538658037 865695.3321720276 895903.2168644262 853972.184433777 726610.7835225558 741910.6352574575 874414.128564553 1.0540217822689897 0.903496790006842 1.1242280975972039 0.9685509716730073 0.9900289849995467 1.0245754129512408 0.9766221250743813 0.830968713549228 0.8484659739835008 1.0 19.737957186340203 -7.1011304393421275 5.1126973282993 0.8808895178713763 1.007739166176839 0.36812976473236037 0.06821845242994173 0.21569460239996596 8.624015001002569 0.031174787792108107 0.01776289283861297 7.922633402824138e-08 7.1011304393421275 0.12684964830546264 RT(ph)PSEADRWLEEVSK ddPTM_KYSE-520_SHP099_60min_R1 1 RTPSEADRWLEEVSK 15 2 G3V3Z8;P49757-3;P49757;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5;P49757-4;P49757-2 G3V3Z8 NUMB Protein numb homolog 1 RT(0.624)PS(0.376)EADRWLEEVSK 131.67 7.9902e-05 340870000.0 108140.0 146720.0 179640.0 61351.0 79744.0 93919.0 64392.0 85867.0 201750.0 100970.0 True False 102141.25862825444 139671.3509687902 191219.88183416237 67181.78059414912 86019.39911870589 93332.81668351586 70901.37176535933 85569.14741850842 165117.28570362373 100075.48435347123 1.0206421611459486 1.395660004756655 1.9107564961540924 0.6713110711196758 0.8595451690733906 0.9326241815014359 0.7084789269161308 0.8550460482037163 1.649927419990513 1.0 16.610729072651996 -5.2770303605742805 24.880787496715907 0.9327705397678471 1.4376836571091178 0.32202378754463046 0.3237888843164787 853.4278431997164 1361936.4340113173 0.0922960725846677 0.13744581183864124 5.284083106184208e-06 5.2770303605742805 0.5049131173412708 RT(ph)PSEAER ddPTM_KYSE-520_SHP099_60min_R1 3 RTPSEAER 8 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 RT(0.667)PS(0.333)EAER;RT(0.812)PS(0.188)EAER;RT(0.5)PS(0.5)EAER 80.763 0.010259 0.0 297813.0 273340.0 270252.0 255488.0 256092.0 262526.0 235273.0 238724.0 306975.0 260366.0 True False 281292.71921450336 260208.3361082956 287672.8763384885 279769.50270473177 276244.98343583994 260887.47785492483 259056.690883206 237895.92216260036 251236.07821001197 258059.35980168256 1.0900310666145787 1.0083274495769676 1.1147546694666055 1.084128484701091 1.070470699641094 1.0109591764290808 1.003864735161282 0.9218651179535681 0.9735592555258827 1.0 17.97734343249371 -6.575838893761911 1.737332013115623 0.9632603063214016 1.0735052903390994 0.676910171552005 0.03245431191150479 0.20568705670387868 1.2601747881167398 0.015712583970418557 0.011313337997902321 2.655590499312747e-07 6.575838893761911 0.11024498401769778 RT(ph)PSTKPTVR ddPTM_KYSE-520_SHP099_60min_R1 1 RTPSTKPTVR 10 2 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RT(0.684)PS(0.26)T(0.054)KPT(0.002)VR 80.96 0.022212 2175800000.0 818670.0 700000.0 698990.0 717250.0 611080.0 619000.0 572750.0 730650.0 821910.0 581210.0 True False 773256.7431218161 666370.9492785782 744048.0138235432 785417.2243509238 659168.5194304121 615136.5913936088 630649.1595013293 728115.5456849916 672671.8626650088 576060.9315745374 1.3423176277694908 1.1567716412519036 1.2916133919893675 1.3634273412782159 1.1442687453716365 1.067832511592596 1.0947612048218351 1.263955782758685 1.1677095699345663 1.0 19.135861892061413 -5.855631179578497 8.003997640617788 1.1310834471923539 1.27902588170079 0.48966762667410746 0.08234079116227995 0.24544879617868048 18.327122863679133 0.026277433915019976 0.029864511886054372 1.3943404305132715e-06 5.855631179578497 0.14794243450843614 RT(ph)PTMPQEEAAACPPHILPPEK ddPTM_KYSE-520_SHP099_60min_R1 11 RTPTMPQEEAAACPPHILPPEK 22 1 Q9NYV4 Q9NYV4 CDK12 Cyclin-dependent kinase 12 1 RT(0.887)PT(0.113)MPQEEAAACPPHILPPEK;RT(0.946)PT(0.054)MPQEEAAACPPHILPPEK;RT(0.991)PT(0.009)MPQEEAAACPPHILPPEK;RT(0.993)PT(0.007)MPQEEAAACPPHILPPEK;RT(0.646)PT(0.354)MPQEEAAACPPHILPPEK;RT(0.998)PT(0.002)MPQEEAAACPPHILPPEK;RT(0.976)PT(0.024)MPQEEAAACPPHILPPEK;RT(0.997)PT(0.003)MPQEEAAACPPHILPPEK;RT(0.99)PT(0.01)MPQEEAAACPPHILPPEK;RT(0.995)PT(0.005)MPQEEAAACPPHILPPEK;RT(0.924)PT(0.076)MPQEEAAACPPHILPPEK 209.72 4.6773e-19 14430190000.0 5083360.0 4876980.0 4685850.0 4529290.0 4732050.0 4788100.0 4340313.0 4970970.0 5997150.0 4928839.0 True False 4801375.887373071 4642682.560303776 4987907.388625085 4959752.359819301 5104435.4133185195 4758215.691844489 4779074.195412826 4953726.865303125 4908218.735848762 4885173.3210387165 0.9828465791981711 0.9503618920355151 1.0210297692292574 1.0152664058938092 1.044883175656331 0.9740116428116347 0.9782813999313066 1.0140329809730952 1.0047174200986477 1.0 22.219978317795672 -4.762965809765315 24.99937559382504 1.0065408575763841 0.9666042329595685 0.37541767267650583 0.020598091268952814 41.19543287765034 674742.5467156745 0.005661583685582876 0.01290981924416577 1.7259737655224686e-05 4.762965809765315 -0.039936624616815575 RT(ph)PTMPQEEAAEK ddPTM_KYSE-520_SHP099_60min_R1 5 RTPTMPQEEAAEK 13 1 Q9NYV4-2 Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 RT(0.949)PT(0.051)MPQEEAAEK;RT(0.99)PT(0.01)MPQEEAAEK;RT(0.919)PT(0.081)MPQEEAAEK;RT(0.872)PT(0.128)MPQEEAAEK;RT(0.998)PT(0.002)MPQEEAAEK 193.32 2.3697e-08 2989900000.0 3994260.0 3929680.0 3525660.0 3571520.0 3706070.0 3688070.0 3467200.0 3748480.0 4597620.0 3702710.0 True False 3772690.435440097 3740892.274230068 3752929.684855452 3910956.186983361 3997716.6243461883 3665051.3871098952 3817698.4126111 3735477.397781813 3762808.104568498 3669906.8700647913 1.028007131792282 1.0193425628165937 1.0226225944499772 1.0656826795482999 1.089323725611492 0.9986769465474719 1.0402711970028 1.01786708220088 1.0253143302522187 1.0 21.807312022092812 -7.771891579547956 0.8213449618716794 1.0019871700986778 1.039544683271945 0.19313953961139485 0.02396046053706035 1.0675977155800709 1.5795734533241501 0.024400201077957963 0.009304764116884008 1.690862998367527e-08 7.771891579547956 0.037557513173267276 RT(ph)SEEDTPKK ddPTM_KYSE-520_SHP099_60min_R1 2 RTSEEDTPKK 10 2 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 RT(0.885)S(0.114)EEDT(0.001)PKK;RT(0.778)S(0.222)EEDTPKK 96.135 0.0063045 1083990000.0 1401970.0 1395170.0 1160020.0 1156590.0 1402330.0 1302090.0 1344890.0 1306910.0 1734250.0 1458400.0 True False 1324199.929342094 1328143.9390071349 1234796.7452976233 1266511.965858537 1512685.3928337544 1293963.1733242387 1480844.6060615336 1302376.6342450867 1419353.9168848053 1445479.7106180293 0.9160972095387759 0.9188257221813744 0.8542470269400555 0.8761879925087479 1.0464936876817112 0.8951790632682016 1.0244658539194462 0.9009995952750125 0.9819258661734839 1.0 20.46311692798612 -5.721400859601599 24.999949132486943 0.9683919845337419 0.8906532551272376 0.4142886715956342 0.04827423662864477 158.7768657722116 99139.1321690096 0.013502261878527029 0.01743111503111872 1.8993243688709685e-06 5.721400859601599 -0.07773872940650428 RT(ph)SFDDRLEDDDFDLIEENLGVK ddPTM_KYSE-520_SHP099_60min_R1 4 RTSFDDRLEDDDFDLIEENLGVK 23 2 Q7KZ85;Q7KZ85-3 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 RT(0.5)S(0.5)FDDRLEDDDFDLIEENLGVK;RT(0.5)S(0.5)FDDRLEDDDFDLIEENLGVK;RT(0.5)S(0.5)FDDRLEDDDFDLIEENLGVK;RT(0.5)S(0.5)FDDRLEDDDFDLIEENLGVK 138.92 8.2006e-07 387944000.0 313360.0 327063.0 298724.0 299643.0 319398.0 322130.0 323772.0 365559.0 460184.0 296763.0 True False 295977.2961323269 311350.40254842857 317980.2270152993 328120.98062904703 344532.8054739721 320119.4671819438 356502.03347021306 364290.9611511117 376626.18589460436 294133.91069812054 1.0062671639248637 1.0585328356374994 1.0810729924359284 1.1155496482886278 1.1713467673830293 1.0883460068311985 1.212039892388005 1.2385207822058835 1.2804582273451237 1.0 18.166113596559608 -5.140707197296648 0.6898861457800958 1.1893961402289317 0.9922433765329224 0.33657301183999677 0.07477564334762421 1.302765981936431 0.9714591227839354 0.03831380362238539 0.1710799577104397 7.232572615775869e-06 5.140707197296648 -0.19715276369600931 RT(ph)SFSFQK ddPTM_KYSE-520_SHP099_60min_R1 1 RTSFSFQK 8 1 Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7;H0Y7F8;Q9BPZ7-4 Q9BPZ7-3 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 RT(0.673)S(0.326)FS(0.002)FQK 94.465 0.004313 2056700000.0 4223200.0 4097000.0 3801800.0 4302900.0 4038800.0 3602400.0 3502400.0 3900100.0 4795700.0 3806400.0 True False 3988930.6772595244 3900173.970277623 4046870.111095071 4711846.32228594 4356630.582371459 3579916.085357572 3856456.7721299934 3886571.463390185 3924921.7697589537 3772678.257334392 1.0573206632462548 1.0337944834535966 1.0726783030669598 1.2489393478295503 1.1547845549515963 0.9489057484289642 1.022206641828714 1.0301889528571315 1.0403542263718322 1.0 21.847157638372124 -6.254011482403527 24.97929715547882 1.0110851434376547 1.1143313441973717 0.430267485353126 0.06046622421367373 656.0337290159638 2206181.0828297874 0.022649383103436116 0.02224474526181001 5.571710175749836e-07 6.254011482403527 0.10324620075971702 RT(ph)SFSTSDVSK ddPTM_KYSE-520_SHP099_60min_R1 2 RTSFSTSDVSK 11 1 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 RT(0.474)S(0.474)FS(0.052)TSDVSK;RT(0.808)S(0.191)FS(0.001)TSDVSK 140.31 0.00011209 1710360000.0 2476650.0 2097500.0 1973870.0 1984240.0 1876860.0 1821860.0 2025310.0 2112590.0 2292430.0 2148140.0 True False 2339265.287420627 1996732.9515883157 2101108.8185036676 2172821.5730164894 2024558.2041273843 1810489.0959553462 2230048.0999207995 2105261.918372213 1876182.4994575367 2129109.150827632 1.098706135620761 0.9378255458683935 0.9868488037294472 1.0205308507419009 0.9508945106644222 0.8503505305266145 1.0474090062756671 0.9887994317030909 0.8812054087167035 1.0 21.02181848215863 -4.25450215041966 24.225985983630178 0.9636382929148459 1.09870623365382 0.333973236530685 0.05762489185187656 645.8154718174491 2255208.0347273382 0.014355143576254798 0.13589853787483458 5.5654187852082576e-05 4.25450215041966 0.1350679407389741 RT(ph)SFYLPK ddPTM_KYSE-520_SHP099_60min_R1 1 RTSFYLPK 8 1 Q9NS23-4;Q9NS23-2;Q9NS23-5;Q9NS23;Q9NS23-3 Q9NS23-4 RASSF1 Ras association domain-containing protein 1 1 RT(0.5)S(0.5)FYLPK 80.979 0.0099334 0.0 899500.0 857110.0 740610.0 714750.0 883050.0 837130.0 845120.0 856080.0 888700.0 852180.0 True False 849602.9418912055 815933.1490516609 788350.9056178976 782679.6251025761 952541.0111327899 831905.1611523927 930552.9771763658 853110.4582905751 727334.4823038928 844630.3481860071 1.0058873017242134 0.9660239545074617 0.9333679606836535 0.9266534487939238 1.1277608165258801 0.9849340163292215 1.1017280863455743 1.010040025346923 0.8611275735781602 1.0 19.687960559595044 -3.883586399359738 17.987666458594695 0.9938618580986143 2.5010799963438837 0.0017683089815569986 0.07517512343466252 3429.5031930639107 531025.5718508665 0.01857774918338227 446.21683264482095 0.0001307415413368775 3.883586399359738 1.5072181382452694 RT(ph)SMGGTQQQFVEGVR ddPTM_KYSE-520_SHP099_60min_R1 6 RTSMGGTQQQFVEGVR 16 1 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y6G0 A0A2R8Y804 CTNNB1 Catenin beta-1 1 RT(0.678)S(0.322)MGGTQQQFVEGVR;RT(0.5)S(0.5)MGGT(0.001)QQQFVEGVR;RT(0.497)S(0.497)MGGT(0.005)QQQFVEGVR;RT(0.987)S(0.013)MGGTQQQFVEGVR;RT(0.441)S(0.441)MGGT(0.117)QQQFVEGVR;RT(0.498)S(0.498)MGGT(0.004)QQQFVEGVR 215.11 1.292e-17 12668060000.0 1462538.0 1618801.0 1479143.0 1436190.0 1693280.0 1612389.0 1436454.0 1414412.0 2047902.0 1492795.0 True False 1381408.1016427788 1541031.3700901608 1574490.9244924774 1572685.065793731 1826531.5025547044 1602325.482165669 1581664.7887600556 1409505.7348982429 1676054.620208292 1479569.9976769367 0.9336551185896705 1.0415400234593322 1.0641544009168715 1.0629338715052303 1.2345015818261589 1.0829670003321707 1.0690030152297068 0.9526455234367409 1.1327984636346065 1.0 20.49674652061273 -4.169812415474661 1.700169322110409 1.0793740775761052 0.858756596665229 0.2652372590734787 0.0705535245937134 1.7269095209625438 4.111112164995762 0.020100119619450674 0.665625847493242 6.763750585348284e-05 4.169812415474661 -0.22061748091087618 RT(ph)SNERPGSGQGQGR ddPTM_KYSE-520_SHP099_60min_R1 4 RTSNERPGSGQGQGR 15 2 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RT(0.927)S(0.072)NERPGS(0.002)GQGQGR;RT(0.74)S(0.26)NERPGSGQGQGR;RT(0.853)S(0.145)NERPGS(0.002)GQGQGR;RT(0.815)S(0.185)NERPGSGQGQGR 141.0 2.5899e-05 42698620000.0 3258418.0 2765653.0 2956984.0 2365454.0 3113530.0 2715377.0 2401374.0 2888936.0 3591295.0 2280585.0 True False 3077667.058044754 2632786.8785502114 3147595.919981678 2590266.0369603196 3358547.0974375997 2698429.324925044 2644128.3190717525 2878914.955298729 2939206.3571796604 2260380.7911682827 1.3615701699774465 1.1647536949690012 1.3925069316992542 1.145942332849827 1.485832436092207 1.1937941321516694 1.1697711860775144 1.2736415769180003 1.3003146941717396 1.0 21.108134403581246 -12.735494525106343 0.3148123620660638 5.564390419359654e-10 1.2870523264911522 0.3804505218183696 0.1060825449232589 133.03853786315292 2.538312180157247 86.85190486842943 0.09429108852152959 1.8386771328329957e-13 12.735494525106343 1.287052325934713 RT(ph)SPGGFK ddPTM_KYSE-520_SHP099_60min_R1 2 RTSPGGFK 8 1 Q5MIZ7-3;Q5MIZ7-2;Q5MIZ7;Q5MIZ7-5 Q5MIZ7-3 SMEK2 Serine/threonine-protein phosphatase 4 regulatory subunit 3B 1 RT(0.5)S(0.5)PGGFK;RT(0.5)S(0.5)PGGFK 81.017 0.0098773 0.0 1277850.0 1215020.0 1171360.0 1197660.0 1160770.0 1143760.0 1091379.0 1120890.0 1306820.0 1035320.0 True False 1206965.1131691784 1156648.6154177976 1246867.7398422663 1311485.2463103922 1252115.995122145 1136621.3695837704 1201706.2401525986 1117001.8942076932 1069534.43025135 1026147.8702667711 1.1762097336472566 1.1271753798184074 1.2150955782991724 1.278066528530085 1.220210099736043 1.1076584598750658 1.1710848650304044 1.0885389197536437 1.0422810018338775 1.0 19.96880721092122 -7.43952034270741 0.9428816676705268 0.999961367270633 1.1980688532026553 0.7161721246450886 0.04339622115388866 0.3251708605195838 0.5325879299610181 0.04417032595613628 0.017043840879784958 3.63479278481748e-08 7.43952034270741 0.19810748593202232 RT(ph)SPQVLGSILK ddPTM_KYSE-520_SHP099_60min_R1 4 RTSPQVLGSILK 12 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 RT(0.793)S(0.207)PQVLGSILK;RT(0.972)S(0.028)PQVLGSILK;RT(0.5)S(0.5)PQVLGSILK;RT(0.5)S(0.5)PQVLGSILK 162.59 6.1059e-06 9017490000.0 4612150.0 4287160.0 4134020.0 3462080.0 3718100.0 4273460.0 3761910.0 4023340.0 5065990.0 4129230.0 True False 4356304.845406915 4081198.3984416495 4400505.543865867 3791115.0422876966 4010693.3169048503 4246787.750980499 4142200.575503529 4009383.9725946174 4146133.919215376 4092648.2346923267 1.0644220063868766 0.9972023404910249 1.0752220302160134 0.9263232080762254 0.9799750887230508 1.037662537176191 1.0121076471686865 0.9796551627887539 1.0130687226108672 1.0 21.964603241022388 -5.230611674982396 24.999928567048684 0.993990703492932 1.040774137632921 0.34000990818219246 0.03355705087805148 914.9819071588649 742009.9597657735 0.009204522801609029 0.01594067906741554 5.880148918757856e-06 5.230611674982396 0.04678343413998898 RT(ph)SPSSLPGR ddPTM_KYSE-520_SHP099_60min_R1 1 RTSPSSLPGR 10 1 H0Y4R5;Q5SNT2 H0Y4R5 TMEM201 Transmembrane protein 201 1 RT(0.954)S(0.039)PS(0.006)S(0.001)LPGR 63.611000000000004 0.037933 316800000.0 436610.0 483050.0 429200.0 476980.0 416390.0 384010.0 481150.0 473880.0 568110.0 390270.0 True False 412390.3729395436 459843.55292716745 456866.91874428024 522312.03579073347 449157.5240649826 381613.25114872353 529789.3375714794 472236.2208844235 464955.54488766193 386812.51142546575 1.0661247006199965 1.188802169900272 1.1811068805935279 1.3502976774611823 1.1611763084129971 0.9865587070656476 1.3696282357029281 1.220840089024416 1.202017854009496 1.0 18.5612749338833 -10.26021468456694 5.858914897161748 0.999990958940982 1.1952372922509522 0.2204241499744798 0.10806268857745877 1.2850399510063287e-05 1.6228226279284883e-06 0.10535669837997877 0.02555156965817402 5.4926928673356324e-11 10.26021468456694 0.1952463333099702 RT(ph)SQEGPGDSVK ddPTM_KYSE-520_SHP099_60min_R1 1 RTSQEGPGDSVK 12 1 Q9NSK0-5;Q9NSK0;Q9NSK0-3 Q9NSK0-5 KLC4 Kinesin light chain 4 1 RT(0.5)S(0.5)QEGPGDS(0.001)VK 98.943 0.0015522 0.0 451790.0 405820.0 374340.0 382600.0 413900.0 415410.0 389830.0 379780.0 488120.0 392370.0 True False 426728.30807896383 386323.79805176094 398470.5553651774 418962.1889671155 446471.57523114444 412817.2721014842 429237.8207741655 378462.6318213185 399489.71250385605 388893.90705924056 1.0972872043838937 0.9933912335451218 1.024625349310186 1.077317441497726 1.1480549505321331 1.0615164305945255 1.1037401537607 0.9731770669363223 1.0272460052787646 1.0 18.569017106163734 -7.26475502823663 24.998912871031106 1.0001586509847928 1.0701039884879144 0.38384903632028533 0.04181789454904232 348.0539205541936 2624183.934327013 0.023475156043290993 0.01197859967760931 5.435568482400515e-08 7.26475502823663 0.0699453375031216 RT(ph)SS(ph)EDNLYLAVLR ddPTM_KYSE-520_SHP099_60min_R1 2 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 2 RT(0.504)S(0.504)S(0.992)EDNLYLAVLR;RT(0.926)S(0.077)S(0.997)EDNLYLAVLR 110.34 0.00047129 1372609000.0 1239700.0 1424080.0 1299150.0 1238790.0 1230820.0 1311340.0 1155160.0 1328290.0 1636960.0 1186040.0 True False 1170931.3697193188 1355665.0592123424 1382895.2877134942 1356524.2291442056 1327678.531592163 1303155.4406431261 1271934.8460751725 1323682.472015216 1339729.3284034885 1175532.6083251578 0.9960858264813304 1.1532347547073396 1.1763989173246132 1.1539656318653007 1.129427224893213 1.1085659652604611 1.0820072850955313 1.1260278640004169 1.1396785754095502 1.0 20.164883128065437 -6.412909252771945 3.911324629753736 1.097180812200411 1.1282735372146522 0.058236219253480326 0.05779526843979486 0.8063279835746971 21.707590228817438 0.021452761172141545 0.01847417860809666 3.864477181111788e-07 6.412909252771945 0.031092725014241207 RT(ph)SSEDNLYLAVLR ddPTM_KYSE-520_SHP099_60min_R1 4 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 1 RT(0.412)S(0.412)S(0.176)EDNLYLAVLR;RT(0.333)S(0.333)S(0.333)EDNLYLAVLR;RT(0.496)S(0.496)S(0.009)EDNLYLAVLR;RT(0.333)S(0.333)S(0.333)EDNLYLAVLR 202.96 5.324100000000001e-11 9738098000.0 992562.0 1383683.0 1394398.0 815164.0 948152.0 818674.0 664152.0 646389.0 1363582.0 709982.0 True False 937502.6072367079 1317208.7917294733 1484283.1261956824 892636.9414720058 1022766.1681530799 813564.3518942998 731290.9656588861 644146.8274273261 1115989.881904926 703692.1118376381 1.3322624930219717 1.8718538542228125 2.109279187910165 1.2685049703640314 1.4534284965653579 1.1561368078572585 1.0392200699098015 0.915381623001551 1.5859064825817129 1.0 19.424584815395523 -5.62549543750689 1.8997309942015255 1.1513492068560927 1.7669736615314657 0.46200904519918995 0.27072425888518137 0.289568835743997 2.134176339007411 0.0905780340460871 0.13202631381152424 2.3686700157840756e-06 5.62549543750689 0.6156244546753731 RT(ph)SSEELR ddPTM_KYSE-520_SHP099_60min_R1 1 RTSSEELR 8 1 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 RT(0.619)S(0.127)S(0.253)EELR 65.695 0.033132999999999996 205440000.0 135280.0 123410.0 129380.0 135080.0 117670.0 112120.0 117730.0 119850.0 136420.0 116650.0 True False 127775.74872600599 117481.19835781353 137720.04181531913 147917.96258671724 126929.9595492843 111420.21749119759 129631.29733407515 119434.26832320017 111649.56686834374 115616.57175232671 1.1051681155165767 1.0161276759657016 1.1911790820985626 1.2793837452954964 1.0978526488503142 0.9637045607084896 1.121217273348761 1.0330203232375001 0.9656882674874578 1.0 16.818988673931187 -6.006438578219156 24.99378065813146 1.025926995710311 1.1475074354963848 0.4077572927167349 0.07460223203347012 345.87753481902143 1342661.7951255084 0.025333499088293823 0.027740844255153232 9.852839805574646e-07 6.006438578219156 0.1215804397860738 RT(ph)SSLDTITGPYLTGQWPR ddPTM_KYSE-520_SHP099_60min_R1 3 RTSSLDTITGPYLTGQWPR 19 1 Q86VQ1;H7C2L5;H7C0Q2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 RT(0.331)S(0.331)S(0.331)LDT(0.008)ITGPYLTGQWPR;RT(0.333)S(0.333)S(0.333)LDT(0.001)ITGPYLTGQWPR;RT(0.333)S(0.333)S(0.333)LDT(0.001)ITGPYLTGQWPR 170.49 1.3361000000000001e-08 1441540000.0 673832.0 651243.0 633294.0 481925.0 565619.0 625627.0 578950.0 651580.0 848815.0 667668.0 True False 636453.1957092105 619956.3087443283 674117.1445462268 527727.0071039657 610129.9973681193 621722.2298284483 637475.9160074987 649319.8210599159 694691.5928848644 661752.9809578431 0.9617685360298447 0.936839465153573 1.0186839560140513 0.7974682733428964 0.9219905537637276 0.9395080154056079 0.9633140074182893 0.9812117810486761 1.049774784360389 1.0 19.335933262991503 -7.2226471214406285 1.6402972443478165 1.0219686243501793 0.9273235096625801 0.32598695620867 0.05339439075022863 0.49004677473353314 2.4145017511011044 0.04173598419637409 0.016787506188511235 5.988980217673907e-08 7.2226471214406285 -0.09464511468759917 RT(ph)SSPHKEES(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 2 RTSSPHKEESPKK 13 3 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 RT(0.762)S(0.238)S(0.22)PHKEES(0.78)PKK;RT(0.97)S(0.009)S(0.021)PHKEES(1)PKK 145.52 2.5589000000000002e-05 2805400000.0 1424970.0 1335210.0 856620.0 1548850.0 1364740.0 1519900.0 1024260.0 1186530.0 1369100.0 1138450.0 True False 1345924.0734927303 1271064.5074089312 911839.0958404597 1696052.238321269 1472137.273691597 1510413.7403217203 1127802.1966142836 1182414.204368185 1120505.9522023853 1128364.2187006979 1.19280995549695 1.1264665135097527 0.8081070639500026 1.503107073241173 1.3046649736791112 1.3385870584065038 0.9995019142958455 1.0479011871979822 0.993035700381069 1.0 20.105801392113637 -6.78568740270586 24.989408619180008 1.0141013464808404 1.2074351697531869 0.25749054099405355 0.16802002980267977 381.0739010646504 392721.28743245796 0.07525625727209154 0.05076531961975296 1.637995096391351e-07 6.78568740270586 0.1933338232723465 RT(ph)SSPHKEESPK ddPTM_KYSE-520_SHP099_60min_R1 1 RTSSPHKEESPK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 RT(0.633)S(0.348)S(0.018)PHKEESPK 132.81 4.2258999999999996e-05 601340000.0 306130.0 283780.0 229700.0 378470.0 283220.0 301220.0 236970.0 263110.0 282360.0 258730.0 True False 289148.35864497453 270146.7828375359 244506.82953299477 414439.67500884493 305507.8026986344 299339.9742481143 260925.24020432975 262197.3328203354 231090.54171635775 256437.85348889424 1.127557241300559 1.0534590707344045 0.9534740140990293 1.6161407895531048 1.1913522069465663 1.1673002646665736 1.0174989248053032 1.022459552102321 0.9011561225159209 1.0 17.968249712250984 -6.812630450806677 2.6045757059303503 0.9751305049717169 1.191569468181576 0.2660411171993553 0.1638486592155413 0.4277204252323339 5.9087563218587675 0.08265098056199108 0.05346994583871835 1.5394640415042763e-07 6.812630450806677 0.21643896320985911 RT(ph)SSPPRK ddPTM_KYSE-520_SHP099_60min_R1 2 RTSSPPRK 8 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.333)S(0.333)S(0.333)PPRK;RT(0.461)S(0.461)S(0.079)PPRK 70.41199999999999 0.050602 1761000000.0 608394.0 670670.0 342907.0 525435.0 744200.0 1029181.0 468817.0 477824.0 500147.0 1748450.0 True False 574645.1720166291 638450.0065038064 365011.33389059926 575372.184422207 802764.306081221 1022757.4996236915 516209.597572998 476166.5400689603 409332.91247985355 1732960.0932735163 0.3315974639272503 0.368415873499886 0.21062881673235903 0.33201698449693895 0.46323300184300276 0.5901794874524372 0.2978773715428678 0.2747706320054342 0.2362044654511544 1.0 20.72480700172226 -10.093769242865932 4.310523479669161 1.0000756607923902 0.34858513129937757 0.7748750752219427 0.10590067325997989 315002237.2381901 570600658.6367838 348799.29289241176 0.029064284761282835 8.058064830258839e-11 10.093769242865932 -0.6514905294930127 RT(ph)STPVIMEGVQEETDTR ddPTM_KYSE-520_SHP099_60min_R1 5 RTSTPVIMEGVQEETDTR 18 1 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 RT(0.489)S(0.489)T(0.022)PVIMEGVQEETDTR;RT(0.552)S(0.337)T(0.111)PVIMEGVQEETDTR;RT(0.459)S(0.459)T(0.083)PVIMEGVQEETDTR;RT(0.443)S(0.443)T(0.114)PVIMEGVQEETDTR;RT(0.49)S(0.49)T(0.019)PVIMEGVQEETDTR 224.99 2.4005999999999998e-18 2203240000.0 561016.0 646995.0 652381.0 575447.0 586767.0 750928.0 774627.0 960720.0 1025450.0 819764.0 True False 529895.3241223309 615912.3890407055 694434.5231065059 630137.3098655501 632942.2246524589 746241.1798094022 852933.8567909837 957387.4865537348 839254.1294908596 812501.528726741 0.652177633379622 0.758044591012515 0.8546870357213282 0.7755521529332122 0.7790043492525278 0.9184489547715998 1.0497627716806928 1.1783208433515717 1.0329262159125314 1.0 19.63201100190762 -6.540385052675799 2.0762878761770063 1.085508735448654 0.7665600233516704 0.8334440086047601 0.06344134843018609 0.12503210261080366 1.0860975458613364 0.028933497591969587 0.021943911350326303 2.88147560627908e-07 6.540385052675799 -0.3189487120969835 RT(ph)SWIDPR ddPTM_KYSE-520_SHP099_60min_R1 1 RTSWIDPR 8 1 Q6AWC2-4;Q6AWC2;Q6AWC2-6;D6R9P8 Q6AWC2-4 WWC2 Protein WWC2 1 RT(0.5)S(0.5)WIDPR 68.069 0.045118 359640000.0 664940.0 654480.0 536260.0 428820.0 520070.0 546130.0 514790.0 502700.0 551180.0 626860.0 True False 628054.4526749728 623037.7984054917 570828.1776463372 469574.92387056607 560996.5502064773 542721.400093362 566829.9970662402 500956.2510310615 451099.6061170924 621306.5080897004 1.0108608947394098 1.0027865317572715 0.9187545441966054 0.7557862629096616 0.9029304262904713 0.8735163611307404 0.9123194263794913 0.806294871385343 0.726050025621115 1.0 19.244945640803245 -4.920694784155741 3.779264793747045 0.8501001417861824 1.0061379245688826 0.3947795768140272 0.0750570795305493 0.2134505348540484 5.957088389105265 0.019906337299451578 0.04511698199734463 1.2003425901008708e-05 4.920694784155741 0.1560377827827002 RT(ph)TDFSDFLSIVGCTK ddPTM_KYSE-520_SHP099_60min_R1 1 RTTDFSDFLSIVGCTK 16 1 Q9UHD1;E9PPQ5;E9PIZ4;E9PSD5 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 RT(0.808)T(0.166)DFS(0.026)DFLSIVGCTK 130.25 9.9521e-05 108630000.0 208650.0 227430.0 228400.0 267100.0 281830.0 220450.0 207020.0 270870.0 273450.0 215140.0 True False 197075.76856653675 216503.9214206103 243123.0294529212 292485.10369345703 304008.41760665225 219074.0897782247 227947.6019204982 269930.415191533 223798.3731135363 213234.02697638705 0.9242228895689354 1.0153347685197793 1.1401699480160545 1.3716624304330474 1.425703120263809 1.0273880434780907 1.0690020028826848 1.265888090278501 1.0495434349149122 1.0 17.70207815002476 -7.969424501685732 11.246556771230743 1.0000021853579406 1.1588831977566727 0.10952324005228187 0.1514297346574106 1.1492459809478974 415.41319557319963 0.1593457900425233 0.04115434591892321 1.0729401529273912e-08 7.969424501685732 0.1588810123987321 RT(ph)TLCGTLDYLPPEMIEGR ddPTM_KYSE-520_SHP099_60min_R1 1 RTTLCGTLDYLPPEMIEGR 19 1 A3KFJ0;O14965 A3KFJ0 AURKA Aurora kinase A 1 RT(0.48)T(0.48)LCGT(0.04)LDYLPPEMIEGR 130.15 2.0604e-05 153110000.0 140220.0 160400.0 149880.0 125000.0 125720.0 130280.0 140120.0 163730.0 199730.0 163150.0 True False 132441.71707836006 152694.1432346915 159541.5046164789 136879.9624173796 135613.44875104947 129466.87419508777 154284.6970394174 163162.05884486943 163464.06678356757 161704.61792877922 0.8190348474568139 0.9442781856851097 0.9866230578940359 0.8464814683132097 0.8386492017858063 0.8006380761006457 0.9541143537865453 1.0090129826516898 1.0108806345627264 1.0 17.30300135403885 -6.975799627768154 7.34993246828227 1.0026295910768253 0.878010484064714 0.5658000695938561 0.0532188910321112 0.14774398659182367 31.92870895151325 0.02515643413665187 0.016629396622092476 1.0573052099533324e-07 6.975799627768154 -0.12461910701211121 RT(ph)TTITIESEGK ddPTM_KYSE-520_SHP099_60min_R1 2 RTTTITIESEGK 12 1 H0YJG4;Q9HCK8-2;Q9HCK8;A0A2R8Y840;A0A2R8YFI9 H0YJG4 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 RT(0.832)T(0.166)T(0.001)IT(0.001)IESEGK;RT(0.861)T(0.134)T(0.003)IT(0.003)IESEGK 65.179 0.036172 724630000.0 1195090.0 1467660.0 1225410.0 863960.0 1255610.0 1449390.0 1000330.0 1295340.0 1399200.0 1244800.0 True False 1128795.9753471483 1397151.4105974282 1304401.8893253244 946070.498640955 1354419.3635563587 1440343.8193860778 1101453.1186799915 1290846.7678746285 1145140.5509616388 1233772.0404397452 0.9149145371658924 1.1324226557277557 1.0572470817707986 0.7668114267719613 1.09778737008306 1.167431074927509 0.8927525365929089 1.0462603508299155 0.9281621834723082 1.0 20.23464442693318 RT(ph)VNSTRETPPK ddPTM_KYSE-520_SHP099_60min_R1 1 RTVNSTRETPPK 12 2 Q5SWC8;Q5SSJ5-2;Q5SSJ5;B0QZK7;B0QZK5;B0QZK6;B0QZK9;B0QZK8;Q5SSJ5-5 Q5SWC8 HP1BP3 Heterochromatin protein 1-binding protein 3 1 RT(0.629)VNS(0.112)T(0.021)RET(0.239)PPK 77.222 0.032506 433060000.0 323700.0 254290.0 262710.0 255230.0 240620.0 249090.0 207730.0 262250.0 327100.0 269150.0 True False 305743.7157200483 242073.52670292856 279644.7069508619 279486.9824623023 259555.4250594779 247535.33691475593 228729.37564943024 261340.3159596102 267706.88551997714 266765.54039553116 1.1461139818386006 0.9074392679954392 1.0482789738743425 1.0476877262629543 0.9729720888036629 0.9279134649390518 0.8574172485332813 0.9796629488655955 1.0035287358444056 1.0 18.025212791966418 -5.919683309574006 4.607382644369605 0.9466963028475865 1.028458035035694 0.2537275928890448 0.06692452019335757 0.31015087053057416 12.140316496753298 0.021117620565452175 0.02401686208367662 1.2031414535681549e-06 5.919683309574006 0.08176173218810745 RT(ph)VQSLEIDLDSMR ddPTM_KYSE-520_SHP099_60min_R1 1 RTVQSLEIDLDSMR 14 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 RT(0.651)VQS(0.349)LEIDLDSMR 87.85 0.0050753 32630000.0 22748.0 21944.0 23239.0 17898.0 17770.0 19171.0 15378.0 17579.0 23529.0 20954.0 True False 21486.12309298626 20889.777301384467 24737.02312371468 19599.020538770088 19168.39790253063 19051.346677878628 16932.558314817015 17518.022551969443 19256.726717821883 20768.363861965314 1.034560220332784 1.0058460762834336 1.1910915702424434 0.9436959343082035 0.9229613863629949 0.9173253514095451 0.8153053570978164 0.8434955525818542 0.9272144327694581 1.0 14.342099944253684 -5.464916416868944 6.724705703852864 0.8960767252392438 1.0706882014158707 0.5843275520068096 0.06502083585244747 0.16696620353801042 15.922393458269404 0.0187015949437557 0.027588533479530646 3.428337610478722e-06 5.464916416868944 0.17461147617662698 RT(ph)YSLTTPAR ddPTM_KYSE-520_SHP099_60min_R1 1 RTYSLTTPAR 10 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 RT(0.735)YS(0.088)LT(0.088)T(0.088)PAR 85.522 0.0051348999999999995 449230000.0 454960.0 426490.0 440850.0 364410.0 453980.0 398670.0 335010.0 403150.0 557230.0 430910.0 True False 429722.461859725 406000.7802254586 469267.8963849397 399043.41683613806 489705.6432071395 396181.75265087193 368876.08018252323 401751.56674591755 456051.0786251813 427092.4726429072 1.0061578917571248 0.9506156306456767 1.0987500984998524 0.934325567404179 1.146603310933516 0.927625228792361 0.8636913638394681 0.9406664656481145 1.0678040654827612 1.0 18.70418894563989 RTAQEVETYRR ddPTM_KYSE-520_SHP099_60min_R1 4 RTAQEVETYRR 11 2 P17844-2;P17844;J3KTA4;J3QR02;J3KRX8;J3QRQ7;J3KTQ4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ;;; 168.98 9.1207e-06 2492580000.0 530801.0 553484.0 464239.0 288573.0 459136.0 434265.0 283933.0 314910.0 491371.0 315179.0 False True 501356.4104044402 526893.7978435789 494164.5887486624 315998.8911573637 495267.39107351203 431554.5910525772 312635.71855904156 313817.65071054647 402150.4128548962 312386.75926555163 1.6049220894738707 1.6866713527882933 1.581899917622905 1.01156301214656 1.5854301643191555 1.3814752970554818 1.0007969585333105 1.00458051246589 1.2873478178152835 1.0 18.252973779559618 -4.868804262960293 0.32480011139842924 1.0069986038386514 2.029791188076353 0.5378111997828586 0.18718904102245545 3.8555805341302545 0.44395542411350425 0.21389268995551075 1.5100154964134547 1.352682081252113e-05 4.868804262960293 1.0227925842377017 RTAS(ph)PPALPK ddPTM_KYSE-520_SHP099_60min_R1 2 RTASPPALPK 10 1 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 RT(0.194)AS(0.806)PPALPK;RT(0.335)AS(0.665)PPALPK 109.15 0.00048737 1429140000.0 1667390.0 1341700.0 1343430.0 1092700.0 1119340.0 1212760.0 1239170.0 1406560.0 1652750.0 1393430.0 True False 1574896.552840442 1277242.7180672428 1430029.647363999 1196549.8794677653 1207425.6898265968 1205190.7149895192 1364437.396733761 1401680.971653573 1352652.2624369976 1381085.294272134 1.1403325771204096 0.9248108884834525 1.0354390516609329 0.8663837667595878 0.8742585956379615 0.8726403213385053 0.9879457861093606 1.0149126758983364 0.9794125446465481 1.0 20.397370990892274 -10.116572902361842 18.657743424927578 1.0 0.9607294032015712 0.011064463812142322 0.08203205208148198 0.0 0.0 0.0813406146639118 0.019727996818351363 7.645873310609754e-11 10.116572902361842 -0.039270596798428814 RTAS(ph)PPPPPK ddPTM_KYSE-520_SHP099_60min_R1 3 RTASPPPPPK 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.24)AS(0.76)PPPPPK;RT(0.054)AS(0.946)PPPPPK;RT(0.002)AS(0.998)PPPPPK 112.5 0.00068053 6048400000.0 4972500.0 4438600.0 4192200.0 3862000.0 4174800.0 4730600.0 3981700.0 4407200.0 5412100.0 4544100.0 True False 4696665.5125669995 4225362.993525573 4462435.919757161 4229043.318847356 4503333.008637302 4701074.57067303 4384209.093647213 4391912.4518482145 4429399.067938453 4503842.8092563 1.0428129291977974 0.9381683980714435 0.990806320013203 0.9389855503295594 0.9998868076350376 1.0437918839022042 0.9734374131878634 0.9751478099595202 0.9834710613867671 1.0 22.102725045440405 RTAS(ph)PPPPPKR ddPTM_KYSE-520_SHP099_60min_R1 5 RTASPPPPPKR 11 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.118)AS(0.882)PPPPPKR;RT(0.071)AS(0.929)PPPPPKR;RT(0.15)AS(0.85)PPPPPKR;RT(0.088)AS(0.912)PPPPPKR;RT(0.204)AS(0.796)PPPPPKR 93.494 0.0015676 27196590000.0 3492940.0 3029410.0 3230830.0 2947390.0 3128700.0 3296780.0 2982180.0 3082390.0 3806730.0 2942510.0 True False 3299179.6551967375 2883872.5963628856 3439094.4713107734 3227509.0594348833 3374910.8901321096 3276203.5731415492 3283647.857672062 3071697.908525232 3115523.7918540533 2916441.6506381356 1.1312345832377124 0.9888326055595442 1.1792090784872304 1.1066599116525044 1.1572015813838272 1.1233564616061136 1.1259089846538088 1.0532348239688338 1.0682620004320529 1.0 21.475777779708633 -7.831772395023145 1.239364000581528 1.004760837479654 1.114719311888782 0.3471745633089294 0.049079747851704957 0.49720416879101687 1.6364576804189799 0.0462602102244179 0.014707988995149378 1.4730843139417419e-08 7.831772395023145 0.10995847440912798 RTAST(ph)DLK ddPTM_KYSE-520_SHP099_60min_R1 1 RTASTDLK 8 1 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 RT(0.038)AS(0.285)T(0.677)DLK 81.79899999999999 0.010631 629510000.0 1037900.0 1064200.0 822140.0 956840.0 962750.0 928060.0 918830.0 835210.0 1052200.0 907920.0 True False 980325.6179976461 1013074.2346032326 875136.4598705091 1047777.7859155646 1038512.9477018212 922267.6332936226 1011714.3033166425 832312.8514494804 861147.0038034841 899876.5351510718 1.0894001340229063 1.1257924782238677 0.9725072559243815 1.1643572701222429 1.154061593046734 1.024882411384126 1.1242812361440175 0.924918940474152 0.9569612832041612 1.0 19.77936754883016 -7.261668041404819 24.99997545446466 0.9557050784271539 1.0925941610632168 0.5292548451484644 0.05741232014204348 15.895074789926745 1737611.792779214 0.02891389299272074 0.015279968526653346 5.474342414466337e-08 7.261668041404819 0.13688908263606292 RTDALT(ph)SS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 5 RTDALTSSPGR 11 1 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 2 RT(0.005)DALT(0.909)S(0.086)S(1)PGR;RT(0.149)DALT(0.823)S(0.06)S(0.968)PGR;RTDALT(0.683)S(0.318)S(0.998)PGR;RT(0.021)DALT(0.978)S(0.004)S(0.997)PGR;RTDALT(0.999)S(0.006)S(0.995)PGR 140.43 0.00025937 3122610000.0 5564060.0 5165690.0 4941720.0 4938430.0 5619820.0 5482380.0 5006720.0 4820780.0 5961260.0 5348720.0 True False 5255410.500121376 4917522.498541227 5260271.178231566 5407776.902406876 6062067.861598184 5448162.432834392 5512848.118478379 4804057.839358508 4878845.455135481 5301334.502041186 0.9913372751894587 0.9276008704313641 0.9922541534034857 1.0200784161657233 1.1434984642572716 1.0276964094110026 1.0398981834396137 0.9061978333019335 0.9203051520814178 1.0 22.337924143553174 -7.257535718295293 24.86068318323865 0.9349386182578583 1.0207007562429635 0.2894784198946503 0.0557757238801316 406.4056772266777 2588238.3121664487 0.030322771668084846 0.016617650562651135 5.526679522231937e-08 7.257535718295293 0.08576213798510524 RTDALT(ph)SSPGR ddPTM_KYSE-520_SHP099_60min_R1 1 RTDALTSSPGR 11 1 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 RTDALT(0.333)S(0.333)S(0.333)PGR 63.708999999999996 0.059071000000000005 1671900000.0 271950.0 206690.0 203850.0 184890.0 246630.0 263450.0 178920.0 238390.0 236170.0 227890.0 True False 256864.39138111522 196760.30215198515 216990.4971715324 202461.89001079448 266038.3778672557 261805.71082818464 197006.97969092592 237563.08073064417 193287.4813612134 225871.0718957372 1.137216861040464 0.8711177597935619 0.9606829920729995 0.8963604250492578 1.1778328921645171 1.1590935865794934 0.8722098763575398 1.0517640826546573 0.8557425248791289 1.0 17.785139985960257 -6.798933664661114 24.999927371343677 0.9492429345165807 1.0233145390399336 0.125969633591961 0.1123623253247919 471.16275766834156 314151.58152073156 0.0490740397826889 0.033086592837917865 1.5887894061480748e-07 6.798933664661114 0.07407160452335293 RTDALTS(ph)S(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 3 RTDALTSSPGR 11 1 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 2 RTDALT(0.021)S(0.989)S(0.989)PGR;RT(0.017)DALT(0.213)S(0.776)S(0.995)PGR;RT(0.01)DALT(0.536)S(0.608)S(0.846)PGR 88.22399999999999 0.009474600000000001 4861500000.0 7120330.0 5922870.0 5953850.0 6713790.0 6253080.0 6315020.0 6573360.0 6908910.0 7067900.0 6701740.0 True False 6725351.100874041 5638326.434790881 6337644.69749682 7351866.583025426 6745161.82084166 6275605.617742269 7237859.378611366 6884944.603761716 5784547.527259691 6642367.797474825 1.0124930304869242 0.8488428534376489 0.9541243259528855 1.1068141372449032 1.0154755091107592 0.9447844216226653 1.0896504980291704 1.036519628795489 0.8708562524132969 1.0 22.66326617847948 -5.011558715195777 24.44213138277981 1.0130642286712166 0.9233718475394399 0.16522831228318424 0.07332362710943313 614.7223507650097 1299906.880161731 0.0192247315267723 0.035977564686649574 9.737361304840472e-06 5.011558715195777 -0.08969238113177669 RTDALTS(ph)SPGR ddPTM_KYSE-520_SHP099_60min_R1 7 RTDALTSSPGR 11 1 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 RTDALT(0.074)S(0.463)S(0.463)PGR;RTDALT(0.003)S(0.499)S(0.499)PGR;RTDALT(0.02)S(0.49)S(0.49)PGR;RTDALT(0.029)S(0.741)S(0.23)PGR;RTDALT(0.05)S(0.475)S(0.475)PGR;RTDALT(0.02)S(0.49)S(0.49)PGR;RTDALT(0.045)S(0.478)S(0.478)PGR 183.52 1.1928e-06 92725600000.0 38524700.0 33724200.0 31640200.0 30418300.0 32704800.0 32785700.0 30625200.0 31852100.0 38162000.0 30592100.0 True False 36387658.09391454 32104038.81094375 33679777.918109946 33309246.0864046 35278481.69514263 32581072.285062112 33721094.08914901 31741612.499436013 31232742.785733297 30321077.794293623 1.2000779899968672 1.0588026925937861 1.1107711324314606 1.098550859978775 1.163496955302228 1.074535427338728 1.1121337545426986 1.046849743098833 1.0300670377756573 1.0 24.853817700729987 -7.483501800382298 1.119065342364206 1.0008672456434535 1.118353364273652 0.5602708967082328 0.03825323511099178 0.36312726808608525 0.8200859904254711 0.033305700629303825 0.011871617268813892 3.2847188260907175e-08 7.483501800382298 0.11748611863019853 RTDALTSS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 4 RTDALTSSPGR 11 1 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 RT(0.005)DALT(0.016)S(0.116)S(0.863)PGR;RT(0.016)DALT(0.336)S(0.136)S(0.512)PGR;RTDALT(0.005)S(0.065)S(0.931)PGR;RTDALT(0.102)S(0.256)S(0.642)PGR 172.43 6.976000000000001e-06 41257700000.0 11620080.0 9828340.0 9424840.0 9148810.0 9880290.0 9606250.0 9994300.0 9596050.0 11042630.0 9217450.0 True False 10975490.99834481 9356171.793760892 10032380.266677178 10018310.151709972 10657812.611839876 9546293.830492483 11004621.378968373 9562763.542284908 9037566.7540491 9135790.564067585 1.2013728775168115 1.024122841712254 1.098140352093448 1.0966002429076545 1.1665999277346208 1.0449335242030906 1.2045614773888507 1.0467362923025698 0.9892484608387572 1.0 23.12309814694651 -7.5084114673344535 12.366287070289502 1.0023668993848018 1.1139576120500694 0.4443341953749942 0.05673226096022236 0.8688569168590469 746.5367238120796 0.03147225235841499 0.013940408362048342 3.1016196016402205e-08 7.5084114673344535 0.11159071266526754 RTDDIPVWDQEFLK ddPTM_KYSE-520_SHP099_60min_R1 4 RTDDIPVWDQEFLK 14 1 E5RJR5;P63208;E7ERH2;F8W8N3;P63208-2;E5RGM3 E5RJR5 SKP1 S-phase kinase-associated protein 1 0 ;;; 212.11 1.4436e-12 1280304000.0 1226710.0 1097000.0 815370.0 685889.0 1179430.0 1124690.0 892100.0 835700.0 896310.0 975820.0 False True 1158661.950914243 1044298.4733694304 867930.0548381276 751075.6843399534 1272244.4309612683 1117670.392527428 982282.1740569822 832801.1517538461 733562.698136382 967174.9939764731 1.1979858434413038 1.0797409774583495 0.897386781341082 0.7765664838499987 1.3154232056088664 1.1556030702698417 1.0156199035072204 0.8610656364572059 0.758459123431624 1.0 19.883417419052282 -7.199142450297714 4.077284101879119 0.8557400932708166 1.0619755529934343 0.24788716565128444 0.15201960560514233 0.3351019422622889 11.198363875280467 0.08411279554139388 0.044946581610862256 6.322044518181139e-08 7.199142450297714 0.2062354597226177 RTEEGPTLSYGR ddPTM_KYSE-520_SHP099_60min_R1 1 RTEEGPTLSYGR 12 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 0 143.94 0.0011455 0.0 195650.0 220470.0 158240.0 150270.0 194200.0 184480.0 160920.0 183720.0 187070.0 147840.0 False True 184796.90448139454 209878.29026778342 168440.40359295195 164551.61561967692 209482.43515314854 183328.59189061844 177187.3640278551 183082.71820057032 153102.80365093888 146530.2526177797 1.2611518862485849 1.432320538034186 1.1495264669496221 1.122987319546261 1.4296190132120903 1.2511313439745868 1.2092203545846854 1.249453371776658 1.0448545669971885 1.0 17.160839028475685 -7.795551521001805 3.2281990930621394 0.9986169387018502 1.2660048292708541 0.5047337027734431 0.09594615408512135 0.20044175585146715 3.9594545044881126 0.09174303620517682 0.025508850411545124 1.6012106830663363e-08 7.795551521001805 0.2673878905690039 RTEEPDRDER ddPTM_KYSE-520_SHP099_60min_R1 1 RTEEPDRDER 10 2 O95232;H0YA81;J3KPP4 O95232 LUC7L3 Luc7-like protein 3 0 66.289 0.019027000000000002 52668000.0 16407.0 15912.0 12384.0 12567.0 14135.0 15773.0 10633.0 10084.0 12151.0 9997.1 False True 15496.871003456365 15147.563635601067 13182.292455100582 13761.36390159368 15247.344082851461 15674.554856302735 11707.88740807968 10049.020957623292 9944.684701783071 9908.533471626102 1.5639923958306166 1.528739210396509 1.3303979335437637 1.38883962404734 1.538809363314307 1.581924802614646 1.1815963928068847 1.0141784338115714 1.0036484945285284 1.0 13.274455829482797 -6.9455799422605615 3.7831025528402398 1.0163625677590078 1.4802817955710008 0.8942401433685143 0.0755107142846753 0.07724481343414982 2.276689802684814 0.0391027376394164 0.02464633124665382 1.1334961718882161e-07 6.9455799422605615 0.463919227811993 RTES(ph)DSGLKK ddPTM_KYSE-520_SHP099_60min_R1 3 RTESDSGLKK 10 2 Q12802-2;Q12802;Q12802-4;A8MYJ1;A0A087WTD7 Q12802-2 AKAP13 A-kinase anchor protein 13 1 RT(0.134)ES(0.865)DS(0.001)GLKK;RT(0.004)ES(0.996)DSGLKK;RT(0.111)ES(0.883)DS(0.006)GLKK 105.0 0.0010439 2021350000.0 1968780.0 1765140.0 1844890.0 1676500.0 1846130.0 1778940.0 1850600.0 1978030.0 2396760.0 1861900.0 True False 1859567.8487343725 1680340.0248708439 1963814.5613283683 1835834.0559418944 1991409.92795717 1767836.9755957136 2037676.708115515 1971168.6756056738 1961568.801402813 1845405.0145362783 1.0076746481593652 0.910553516238866 1.0641645307449457 0.9948136270796961 1.0791180864204926 0.9579669295739632 1.1041894283719347 1.0681496257345968 1.0629475838374292 1.0 20.81550605137581 -4.7731550123100295 24.997002349574267 1.0427959743999538 0.9591140725163046 0.32343793059310066 0.047581508397371394 208.01351933657537 443829.21631815424 0.01192735519797081 0.025148562114114422 1.6859511530653294e-05 4.7731550123100295 -0.0836819018836491 RTETSLPETEVDHNMDVNT(ph)EEDDDGELALWSPEVK ddPTM_KYSE-520_SHP099_60min_R1 1 RTETSLPETEVDHNMDVNTEEDDDGELALWSPEVK 35 1 A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35;Q8NI35-5 A0A0X1KG69 INADL InaD-like protein 1 RT(0.004)ET(0.004)S(0.004)LPET(0.003)EVDHNMDVNT(0.984)EEDDDGELALWSPEVK 116.84 0.00010993 195320000.0 46150.0 41350.0 39646.0 37340.0 35472.0 38965.0 30746.0 35501.0 62903.0 36158.0 True False 43589.967502255844 39363.48393238462 42201.64459584286 40888.78237331963 38263.444591928346 38721.804981667156 33854.10573204343 35377.85531699571 51481.40085558884 35837.66825049835 1.2163170660984535 1.0983829544166073 1.1775778574895428 1.1409442737042759 1.0676878954421447 1.0804778009274836 0.9446514626847315 0.987169563312863 1.43651647466972 1.0 15.129189152188316 -5.6731697165307065 4.668611577733852 1.0781185897380898 1.1576104596920374 0.06839132882308452 0.12968107909129833 0.6256346286475551 24.00946690448222 0.03906636474797353 0.05047771669415724 2.122414888293497e-06 5.6731697165307065 0.07949186995394752 RTFQQIQEEEDDDYPGSYS(ph)PQDPSAGPLLTEELIK ddPTM_KYSE-520_SHP099_60min_R1 1 RTFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELIK 35 1 Q9NQG5;A2A2M0 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 RT(0.002)FQQIQEEEDDDY(0.042)PGS(0.144)Y(0.13)S(0.562)PQDPS(0.121)AGPLLTEELIK 79.163 0.0046681000000000005 48666000.0 43919.0 45975.0 37959.0 33536.0 32893.0 35328.0 31753.0 32618.0 52856.0 37680.0 True False 41482.72551964409 43766.29199011811 40405.8978765474 36723.251357033936 35481.491964431094 35107.50484774376 34962.903119416354 32504.855771098428 43258.68279132959 37346.18451459641 1.1107620780760334 1.1719079889677206 1.081928405852414 0.9833200321355718 0.9500700654055699 0.9400560004736846 0.9361840727197025 0.8703661751147351 1.1583159927467914 1.0 15.18867323667241 -5.156894328985423 2.6922197374608245 0.9655410485500117 1.1407216918999952 0.4686669449064025 0.07168772283019588 0.2210454302644007 3.1060654046854292 0.020008824289653858 0.039590669763073176 6.9679603546086245e-06 5.156894328985423 0.1751806433499835 RTFSLT(ph)EVR ddPTM_KYSE-520_SHP099_60min_R1 1 RTFSLTEVR 9 1 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 RT(0.007)FS(0.119)LT(0.873)EVR 110.08 0.0016893000000000001 385580000.0 270480.0 288050.0 326740.0 298870.0 326720.0 360200.0 326330.0 396110.0 492160.0 443040.0 True False 255475.93521148764 274211.6456281353 347802.18320248387 327274.5149414579 352431.00521749107 357951.85819059407 359318.62107388675 394735.98686276935 402796.15034396824 439115.01027990395 0.5817973178567507 0.6244642957054584 0.7920525945601022 0.7453047772902233 0.8025938466390431 0.8151665276994875 0.8182790673560606 0.8989353076569936 0.9172907801243573 1.0 18.744239325426555 -3.1260804181267523 0.18963784822904364 1.0182547634553385 1.2400161906017193e-15 0.9204949684303169 0.03402277093852836 6.807494506106586 0.15998188473004646 0.08242058715854131 1.7454566201866242 0.0007480309751048173 3.1260804181267523 -1.0182547634553372 RTGGPAYGPSSDVST(ph)ASETESEKR ddPTM_KYSE-520_SHP099_60min_R1 1 RTGGPAYGPSSDVSTASETESEKR 24 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 RTGGPAYGPSSDVS(0.024)T(0.487)AS(0.487)ET(0.002)ESEKR 129.8 0.00013861 1058000000.0 304220.0 281620.0 237400.0 341680.0 219140.0 273080.0 253980.0 254230.0 347250.0 252930.0 True False 287344.3101524653 268090.552479762 252703.1838534304 374153.16447016253 236385.07126395975 271375.60642611707 279654.77700593235 253348.13546772802 284198.1534601405 250689.23697656204 1.146217179556577 1.069413891529882 1.0080336391827491 1.4924979188681469 0.9429406468138891 1.0825179800259597 1.1155436123972025 1.0106063528025122 1.1336671525579352 1.0 17.935540531662248 RTGGPAYGPSSDVSTAS(ph)ETESEKR ddPTM_KYSE-520_SHP099_60min_R1 3 RTGGPAYGPSSDVSTASETESEKR 24 2 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 RTGGPAYGPSSDVST(0.003)AS(0.901)ET(0.048)ES(0.048)EKR;RTGGPAYGPSSDVST(0.014)AS(0.985)ET(0.001)ESEKR;RTGGPAYGPSSDVST(0.002)AS(0.995)ET(0.002)ESEKR 237.97 1.3800999999999999e-28 4038000000.0 1310070.0 1145700.0 1055840.0 1120090.0 1057550.0 1056630.0 1023340.0 1234360.0 1510360.0 886540.0 True False 1237397.8055402024 1090658.8522692395 1123901.1358037298 1226543.0168326613 1140773.1683636066 1050035.1802330026 1126789.19403595 1230078.2932617883 1236116.6970772017 878685.9453176832 1.4082367108908624 1.241238531333193 1.2790703456596095 1.3958832770327432 1.298271782361521 1.1950062315533785 1.2823571379972016 1.3999066444804253 1.4067787286961688 1.0 19.74498809248741 -10.050492898258735 4.448848349612659 0.9999815877765614 1.3179994739710412 0.638640432566002 0.07279684152211596 25748577.270118415 0.19215502893944153 5005.312029314877 0.01851789104913344 8.902399954192568e-11 10.050492898258735 0.3180178861944798 RTHEHVSEK ddPTM_KYSE-520_SHP099_60min_R1 3 RTHEHVSEK 9 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;E9PSG1;F8W7E0;H0YA91 P20810-6 CAST Calpastatin 0 ;; 91.584 0.0078394 213028000.0 420710.0 647840.0 401880.0 165678.0 524040.0 794780.0 286431.0 318330.0 232819.0 388900.0 False True 397372.37763540767 616716.7939723346 427785.82783073455 181423.9873070928 565278.9666202675 789819.4832113276 315386.2407771719 317225.78752878064 190544.93848937817 385454.6485596217 1.0309186284828071 1.599972386574919 1.1098214262801012 0.4706753128676572 1.4665252286685828 2.0490594319273314 0.818218802019165 0.8229912097679956 0.49433815158647615 1.0 18.556201601381197 -6.96427045649499 24.999765961159554 0.7593177342802377 1.2789663766658024 0.27518108196747615 0.4008659479799401 244.85689026706254 171324.57427265676 0.1779366757823831 0.11996445138554211 1.0857492636677518e-07 6.96427045649499 0.5196486423855646 RTHHDNWQEHK ddPTM_KYSE-520_SHP099_60min_R1 3 RTHHDNWQEHK 11 1 Q14997-3;Q14997-2;Q14997;Q14997-4 Q14997-3 PSME4 Proteasome activator complex subunit 4 0 ;; 136.93 0.00011329 6686700000.0 818520.0 1035710.0 1047420.0 1618890.0 603215.0 828790.0 1130580.0 953950.0 1377100.0 284682.0 False True 773115.0639208334 985952.936967596 1114938.3691312547 1772748.8188629749 650684.5886761406 823617.2141859601 1244870.0597974916 950640.9701036031 1127053.3538659757 282159.9389592444 2.7399887693926077 3.4943051823880937 3.951441062979171 6.282779991382949 2.306084241002499 2.918972896095376 4.411930568135339 3.369156421035784 3.994377649864636 1.0 18.106153643209826 RTIPWLEDR ddPTM_KYSE-520_SHP099_60min_R1 2 RTIPWLEDR 9 1 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ; 148.19 0.00074191 1880470000.0 1428580.0 1214640.0 869410.0 763240.0 1459310.0 1198560.0 958970.0 1011070.0 939850.0 1093840.0 False True 1349333.8195963723 1156286.8711881915 925453.559705183 835778.1001235271 1574149.3946619004 1191079.3424567417 1055912.0462452907 1007562.8341555124 769196.9316904636 1084149.4285946437 1.2446013289380973 1.0665382840140936 0.8536217750949938 0.7709067385728605 1.4519671856511804 1.0986302358713675 0.9739543446645021 0.9293578980727697 0.7094934622504525 1.0 20.04813218674941 -7.16826476664102 2.4895790329827236 0.8557408959953259 1.070340231573661 0.1831180508898952 0.18985518915551378 0.556068519234027 6.638985367943996 0.121195921126187 0.058007072995867055 6.787896838649228e-08 7.16826476664102 0.2145993355783351 RTIQEVLEEQS(ph)EDEDR ddPTM_KYSE-520_SHP099_60min_R1 8 RTIQEVLEEQSEDEDR 16 1 M0R0Q7;P18858-2;P18858-3;P18858 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR;RTIQEVLEEQS(1)EDEDR 245.92 1.865e-23 7572830000.0 3226760.0 2800090.0 2702180.0 2650130.0 2814580.0 2828460.0 2643900.0 2902820.0 3401740.0 2751440.0 True False 3047765.190413417 2665569.4733792255 2876366.8464408643 2901997.5584093616 3036071.43323043 2810806.5319760363 2911171.213977415 2892750.7949432805 2784069.7668869663 2727064.382187931 1.1175992801344083 0.9774501441145412 1.0547484192995649 1.064147065013948 1.1133112415903368 1.0307078007894037 1.0675109957036566 1.0607563260469923 1.020903571280301 1.0 21.37891732999789 -7.90258350233509 3.320917703496114 1.0005198944448888 1.0589703852756147 0.2319258699267437 0.037388616288922635 0.3330098874720068 7.045645374612625 0.03491948904983317 0.009345295781977826 1.251458630405464e-08 7.90258350233509 0.058450490830725954 RTIQEVLEEQS(ph)EDEDREAK ddPTM_KYSE-520_SHP099_60min_R1 6 RTIQEVLEEQSEDEDREAK 19 2 M0R0Q7;P18858-2;P18858-3;P18858 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 RTIQEVLEEQS(1)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK;RTIQEVLEEQS(1)EDEDREAK 278.52 3.9048e-36 13558270000.0 2313010.0 2175630.0 1996420.0 2016970.0 2101390.0 2046880.0 1803670.0 1859930.0 2546700.0 1845040.0 True False 2184702.7244288772 2071109.4691127907 2125112.4275849434 2208662.222375859 2266757.4377264422 2034104.6626684158 1986002.565722851 1853478.3369409244 2084283.4770826239 1828694.3810193986 1.194678972661918 1.1325618378934694 1.1620927201626265 1.2077809421302257 1.2395496269107837 1.1123261950061398 1.0860221294144086 1.0135528146084805 1.1397658891043063 1.0 20.802382555384323 -6.566812100036928 3.0188019664265875 1.0603973313519743 1.183893808542402 0.6417479352790196 0.04481433822825023 0.17278493696904873 3.221734451303476 0.01832856974135774 0.014121012741556749 2.711364465321865e-07 6.566812100036928 0.12349647719042767 RTIQEVLEEQS(ph)EDEDREAKR ddPTM_KYSE-520_SHP099_60min_R1 6 RTIQEVLEEQSEDEDREAKR 20 3 M0R0Q7;P18858-2;P18858-3;P18858 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 RTIQEVLEEQS(1)EDEDREAKR;RTIQEVLEEQS(1)EDEDREAKR;RTIQEVLEEQS(1)EDEDREAKR;RTIQEVLEEQS(1)EDEDREAKR;RTIQEVLEEQS(1)EDEDREAKR;RTIQEVLEEQS(1)EDEDREAKR 269.63 1.1295e-35 4250840000.0 1125280.0 1267880.0 1355380.0 986280.0 1001392.0 1038610.0 824694.0 850475.0 1548080.0 827821.0 True False 1062858.4752099342 1206969.1416733216 1442749.9634846777 1080015.7546641054 1080195.8532589178 1032127.6497371832 908062.1177578153 847524.9007273574 1266987.6959210222 820487.1499749921 1.2953992944829535 1.4710396643141932 1.7584065314473867 1.3163103830413718 1.3165298850711329 1.2579449291419638 1.106735331303473 1.0329532897050115 1.544189565869056 1.0 19.646121213644996 -5.8070605721806015 1.8108924189977007 1.1876895937642802 1.5001399004772407 0.3499847984071065 0.18010357808916996 0.38566551806217897 2.610403707693864 0.06406183959295345 0.08161082638870686 1.5593350031523622e-06 5.8070605721806015 0.3124503067129605 RTKS(ph)DTEPQK ddPTM_KYSE-520_SHP099_60min_R1 2 RTKSDTEPQK 10 2 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 RT(0.204)KS(0.78)DT(0.017)EPQK;RT(0.026)KS(0.972)DT(0.002)EPQK 103.76 0.0011872999999999999 1687400000.0 753380.0 716600.0 561460.0 752240.0 1009280.0 2084530.0 1804040.0 2212200.0 2992800.0 4609700.0 True False 711588.5095742045 682173.460361471 597652.6099677625 823732.6634307964 1088704.593982338 2071519.6750528563 1986409.968933704 2204526.3945313594 2449382.962348477 4568861.6442923285 0.15574744104215973 0.14930928390306575 0.13080996022595318 0.18029275726916533 0.2382879322560374 0.45339951969014247 0.43477131145243497 0.4825110861663702 0.536103553367255 1.0 22.12340332438628 -8.113756229912587 0.2432760605174983 1.1907162294320988 4.902892385243233e-16 0.9663484130715358 0.046879906696882793 0.5645561780309359 0.10527671429292705 0.23603715021779798 0.13132124018156202 7.695622754394792e-09 8.113756229912587 -1.1907162294320983 down RTLEGELHDLR ddPTM_KYSE-520_SHP099_60min_R1 4 RTLEGELHDLR 11 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;H0YAB0 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ;;; 181.66 5.0006e-06 2796690000.0 2800690.0 2710120.0 1948460.0 1574330.0 2643520.0 2400550.0 1772620.0 1953570.0 2252650.0 1935400.0 False True 2645330.142662899 2579921.7672269465 2074060.8492462288 1723953.8498604246 2851549.984428686 2385567.2770111924 1951813.7287040546 1946793.5216366672 1843625.5446853435 1918253.8617184141 1.379030270942947 1.3449323985282093 1.081223340996295 0.8987099592313964 1.4865342076643624 1.2436139577866658 1.0174950081714298 1.0148779369028282 0.961095703482011 1.0 20.871362228578406 -1.0000000057664518 0.17433231809248614 0.9439713417579976 2.633767831442123 0.3157988209362639 0.15992840907821512 81.52762326927655 0.8972069729633363 0.427728648908536 36.18815647910796 0.09999999867222542 1.0000000057664518 1.6897964896841253 RTLS(ph)DPPS(ph)PLPHGPPNK ddPTM_KYSE-520_SHP099_60min_R1 4 RTLSDPPSPLPHGPPNK 17 1 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2 H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 2 RT(0.139)LS(0.861)DPPS(1)PLPHGPPNK;RT(0.175)LS(0.825)DPPS(1)PLPHGPPNK;RT(0.177)LS(0.823)DPPS(1)PLPHGPPNK;RT(0.429)LS(0.571)DPPS(1)PLPHGPPNK 125.04 4.9808e-05 863930000.0 1952950.0 1768000.0 1810560.0 1682890.0 1801220.0 2139870.0 2117450.0 2367530.0 2926900.0 2398630.0 True False 1844615.9703906924 1683062.6261778965 1927271.5945984246 1842831.3596206703 1942965.7664601167 2126514.2775855283 2331502.51032054 2359317.591015659 2395448.741144669 2377380.0043059 0.7759028708282782 0.7079485076552933 0.8106703981306139 0.7751522080117366 0.8172718551266629 0.8944780698643023 0.9807024985899322 0.9924023869732534 1.0076002729080091 1.0 21.180941093769977 -6.410713193231019 1.1670252654984663 1.0076758159095822 0.7592074540180085 0.9509070311725659 0.02362553722458681 0.09149037303178296 0.25585803873364765 0.012900986550976106 0.01014850037625774 3.884067839838526e-07 6.410713193231019 -0.24846836189157373 RTLS(ph)MDK ddPTM_KYSE-520_SHP099_60min_R1 4 RTLSMDK 7 1 P17858;P17858-2 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type 1 RT(0.004)LS(0.996)MDK;RT(0.151)LS(0.849)MDK;RT(0.003)LS(0.997)MDK;RT(0.019)LS(0.981)MDK 92.40899999999999 0.0045246 2280360000.0 3237110.0 2548920.0 2301550.0 2633310.0 2989870.0 2967740.0 2923780.0 3016320.0 3059400.0 2943760.0 True False 3057541.055281203 2426466.05719308 2449911.595610204 2883578.9906664826 3225155.7589667593 2949217.2338327453 3219344.2157429853 3005857.0899343775 2503890.0811978527 2917680.5766106243 1.0479355004765634 0.8316421189641765 0.8396777958662588 0.9883120907005672 1.105383428474312 1.0108088107639104 1.1033915917837702 1.0302214416583548 0.8581782739584678 1.0 21.476390517088408 -5.459956319361348 6.654746904748208 1.025495063576805 0.9003483506755544 0.2549214590476284 0.08458228913404006 0.3016725488673711 26.22766015802914 0.02414254189817921 0.035675860263491455 3.4677172643966247e-06 5.459956319361348 -0.12514671290125057 RTLS(ph)MDKGF ddPTM_KYSE-520_SHP099_60min_R1 2 RTLSMDKGF 9 2 P17858;P17858-2 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type 1 RT(0.001)LS(0.999)MDKGF;RTLS(1)MDKGF 142.51 0.00029101 1371570000.0 1506360.0 1303800.0 1294050.0 1074290.0 1257840.0 1264120.0 1067180.0 1153480.0 1515660.0 1224670.0 True False 1422799.2079457892 1241163.4909563018 1377466.5335532061 1176390.1986029337 1356824.8518693957 1256230.1581784943 1175060.9690731182 1149478.847104256 1240454.350679328 1213820.3765788428 1.1721661914722128 1.0225264914851122 1.1348190886658212 0.9691633303426606 1.1178135398366038 1.0349390918277246 0.9680682510743739 0.9469925446004346 1.0219422697249103 1.0 20.2111235139885 -1.0000000000011013 0.26271927944243834 0.9762433098791009 2.1088115955899314 0.42858249594230413 0.05534231181324303 49.17686088188974 0.680946866697891 0.06570757460805926 25.028349497847294 0.0999999999997464 1.0000000000011013 1.1325682857108306 RTMIIS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 3 RTMIISPER 9 1 O75533;B4DGZ4;A0A494C1M2;O75533-2 O75533 SF3B1 Splicing factor 3B subunit 1 1 RT(0.001)MIIS(0.999)PER;RT(0.002)MIIS(0.998)PER;RTMIIS(1)PER 102.33 0.0011476 0.0 423000.0 428190.0 384690.0 375430.0 412050.0 397470.0 366620.0 377770.0 430920.0 413350.0 True False 399535.3467704056 407619.1096737068 409487.7329257623 411110.754322855 444475.9907562043 394989.2422959891 403681.52746639453 376459.60404218105 352675.79060919746 409688.0405814338 0.9752184764861103 0.994949984615634 0.99951107272893 1.0034726757935186 1.0849132674837152 0.964121973722777 0.9853388126572727 0.918893320654187 0.8608398480675102 1.0 18.64416625340175 -7.067191649419904 2.1795603535777217 0.917297280975667 1.0072802300221535 0.3771523178519298 0.04378666473772225 0.3086516333405783 2.858282582905487 0.0257510716128978 0.012958397415564964 8.56659727209068e-08 7.067191649419904 0.08998294904648652 RTNS(ph)TGGSSGSSVGGGSGK ddPTM_KYSE-520_SHP099_60min_R1 2 RTNSTGGSSGSSVGGGSGK 19 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 RT(0.002)NS(0.918)T(0.078)GGSSGS(0.001)SVGGGSGK;RT(0.04)NS(0.958)T(0.002)GGSSGSSVGGGSGK 171.83 2.3081e-10 483190000.0 1326280.0 1291100.0 1206350.0 1026360.0 986960.0 1127400.0 1055020.0 1029670.0 1439570.0 1138960.0 True False 1252708.6045263691 1229073.6180193895 1284113.2512282454 1123904.9458136142 1064628.136965764 1120363.4784122037 1161671.7176029542 1026098.3150967847 1178180.3766065228 1128869.7004974724 1.1097016812253204 1.0887648215535939 1.1375212308934857 0.9956020126311563 0.9430921358741418 0.9924648326715473 1.0290573988220488 0.9089608080052125 1.0436814595053088 1.0 20.106447542330905 -5.308952116920963 6.74781159247148 0.9834030053213976 1.1095879166067868 0.6898024960284856 0.038178135727177334 0.11829971186853883 13.71163701715466 0.01026927329085296 0.015445816215832079 4.90962004117604e-06 5.308952116920963 0.12618491128538922 RTPAPPEPGS(ph)PAPGEGPSGR ddPTM_KYSE-520_SHP099_60min_R1 3 RTPAPPEPGSPAPGEGPSGR 20 1 P0C1Z6-2;P0C1Z6 P0C1Z6-2 TFPT TCF3 fusion partner 1 RTPAPPEPGS(1)PAPGEGPSGR;RTPAPPEPGS(1)PAPGEGPSGR;RTPAPPEPGS(1)PAPGEGPSGR 87.196 0.0012378 2047070000.0 1187160.0 1138480.0 1062680.0 1009930.0 921600.0 1071150.0 869980.0 1018840.0 1316230.0 1100300.0 True False 1121305.8682552134 1083785.7119066808 1131182.0531481171 1105913.443553474 994124.6768132931 1064464.5555270815 957926.0685865857 1015305.8818390425 1077235.8114581453 1090552.1980204466 1.028200090092515 0.9937953578691161 1.0372562223077642 1.0140857499172538 0.9115791785279171 0.976078501752856 0.8783862618638505 0.9310016372274614 0.9877893175709764 1.0 20.056627393886057 -5.74295093437589 22.84647058853335 0.9419985740266165 1.017933248160193 0.4813383865062213 0.0357651012319287 71.84916006724546 88783.73089822814 0.010301007203661406 0.01326308103120785 1.8073783080558956e-06 5.74295093437589 0.07593467413357657 RTPDFHDK ddPTM_KYSE-520_SHP099_60min_R1 1 RTPDFHDK 8 1 A0A3B3IRN8;A0A3B3ITX0;P24311 A0A3B3IRN8 COX7B Cytochrome c oxidase subunit 7B, mitochondrial 0 63.426 0.06200800000000001 850140000.0 472740.0 606300.0 405010.0 589860.0 792090.0 599120.0 437170.0 820650.0 871490.0 374000.0 False True 446516.1698161736 577172.4379251465 431117.5926389125 645920.1170521242 854422.9766243944 595380.6698477207 481363.40996804176 817803.3566911492 713249.3844750982 370686.6509675972 1.2045650110427226 1.5570359397042297 1.1630243266477858 1.7424962980622305 2.3049736870591597 1.6061562192585257 1.2985722812287597 2.206185074527099 1.9241302124403865 1.0 18.499840636721988 -5.317717623067566 8.186595990273958 1.7785189469775158 1.3335633864663652 0.19313876830058152 0.38002301590424276 0.5018631012818053 68.12196212606376 0.10608248607158956 0.15800070342445152 4.8115209037170995e-06 5.317717623067566 -0.4449555605111506 RTPHVQAVQGPLGS(ph)PPKR ddPTM_KYSE-520_SHP099_60min_R1 1 RTPHVQAVQGPLGSPPKR 18 2 Q15149 Q15149 PLEC Plectin 1 RTPHVQAVQGPLGS(1)PPKR 116.45 4.9804e-05 4303700000.0 1729400.0 1592700.0 1284500.0 1663600.0 1449000.0 1458000.0 1302000.0 1512700.0 2102000.0 1385300.0 True False 1633466.7345265702 1516184.301308562 1367300.9252726664 1821708.0438204238 1563028.0563177755 1448900.0811823616 1433618.8662954697 1507452.7967668334 1720329.7871078935 1373027.319747091 1.189682616677614 1.104263753169777 0.9958293659623033 1.3267820804585146 1.138380885680907 1.0552594695998083 1.0441298914281907 1.0979044444975088 1.2529465090503624 1.0 20.388928901052104 -6.022739415220848 24.247168273402306 1.0936886332038576 1.1509330633103 0.08834180704114925 0.09836201489724605 1597.4318127623496 1703348.2336390978 0.033006709628783513 0.03326578863515687 9.489877028060308e-07 6.022739415220848 0.057244430106442534 RTPS(ph)DDEEDNLFAPPK ddPTM_KYSE-520_SHP099_60min_R1 16 RTPSDDEEDNLFAPPK 16 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 RT(0.028)PS(0.972)DDEEDNLFAPPK;RT(0.003)PS(0.997)DDEEDNLFAPPK;RT(0.003)PS(0.997)DDEEDNLFAPPK;RT(0.106)PS(0.894)DDEEDNLFAPPK;RT(0.078)PS(0.922)DDEEDNLFAPPK;RT(0.013)PS(0.987)DDEEDNLFAPPK;RT(0.083)PS(0.917)DDEEDNLFAPPK;RT(0.05)PS(0.95)DDEEDNLFAPPK;RT(0.019)PS(0.981)DDEEDNLFAPPK;RTPS(1)DDEEDNLFAPPK;RT(0.081)PS(0.919)DDEEDNLFAPPK;RT(0.069)PS(0.931)DDEEDNLFAPPK;RT(0.003)PS(0.997)DDEEDNLFAPPK;RT(0.176)PS(0.824)DDEEDNLFAPPK;RT(0.032)PS(0.968)DDEEDNLFAPPK;RT(0.415)PS(0.585)DDEEDNLFAPPK 317.97 3.274e-47 22625980000.0 17020960.0 15298240.0 14459280.0 13445880.0 15176650.0 14840180.0 13722260.0 14606400.0 18529770.0 14242490.0 True False 16076773.418357436 14563289.587273609 15391348.324465975 14723772.39254878 16370966.011673683 14747556.931934722 15109439.957151847 14555733.807559371 15165230.865489155 14116312.619089546 1.138879100524931 1.0316638615370146 1.0903235667685762 1.0430324681700351 1.1597197124647949 1.04471736563779 1.070353169759027 1.0311286098804298 1.0743053993421166 1.0 23.750859949641306 -8.395020287729901 0.3923593982566062 0.9926989527845677 1.0882251768915323 0.2872286336951707 0.039999974796414976 2.829724733263483 0.9163919164183593 0.0837673612222484 0.030757854137636 4.026982221509331e-09 8.395020287729901 0.09552622410696465 RTPS(ph)EADR ddPTM_KYSE-520_SHP099_60min_R1 5 RTPSEADR 8 1 G3V3Z8;P49757-3;P49757;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5;P49757-4;P49757-2 G3V3Z8 NUMB Protein numb homolog 1 RT(0.214)PS(0.786)EADR;RT(0.208)PS(0.792)EADR;RT(0.199)PS(0.801)EADR;RT(0.2)PS(0.8)EADR;RT(0.001)PS(0.999)EADR 101.71 0.0020391 5125160000.0 6211455.0 5404863.0 5670382.0 4843480.0 5056987.0 5239810.0 4979631.0 4839457.0 5712536.0 5278052.0 True False 5866893.2089214455 5145205.268615235 6035903.896651977 5303802.882954644 5454943.106579896 5207106.402181172 5483020.69799523 4822670.0532047525 4675283.463713688 5231292.565542314 1.121499731742348 0.983543780844122 1.1538073661583197 1.0138608797928725 1.0427524437288658 0.9953766372157328 1.0481196815699065 0.9218888052583615 0.8937147760591772 1.0 22.318736025834845 -6.797581094054972 0.982742166335135 0.9341748634714772 1.0661564216886794 0.43682119303864564 0.05685493832267277 0.5084694118474793 0.9591538450930296 0.041412703688273135 0.022909931466508823 1.5937452593093601e-07 6.797581094054972 0.13198155821720226 RTPS(ph)EADRWLEEVSK ddPTM_KYSE-520_SHP099_60min_R1 1 RTPSEADRWLEEVSK 15 2 G3V3Z8;P49757-3;P49757;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5;P49757-4;P49757-2 G3V3Z8 NUMB Protein numb homolog 1 RT(0.322)PS(0.678)EADRWLEEVSK 165.88 3.1965e-08 288740000.0 216310.0 344600.0 350020.0 156520.0 176030.0 145070.0 126850.0 116520.0 343700.0 185760.0 True False 204310.85309670557 328044.8987448544 372582.84925180115 171395.6137405462 189882.55952630675 144164.5643190158 139673.2359366979 116115.81931597233 281292.7439719235 184114.310919093 1.1096956672014906 1.7817457920965747 2.023649586997768 0.9309195623357279 1.0313297134721295 0.7830166139685216 0.7586223756287785 0.6306724270173553 1.5278157497248244 1.0 17.49024224392519 -5.28242858283978 23.745132187659227 0.9246153129816964 1.6527018352486902 0.5051616975462483 0.3104960476316105 311.10582189865386 351953.9702192561 0.08725601824176706 0.12961282446989877 5.21880917414847e-06 5.28242858283978 0.7280865222669938 RTPS(ph)EAER ddPTM_KYSE-520_SHP099_60min_R1 4 RTPSEAER 8 1 Q9Y6R0;A0A0C4DGH3 Q9Y6R0 NUMBL Numb-like protein 1 RT(0.269)PS(0.731)EAER;RT(0.338)PS(0.662)EAER;RT(0.216)PS(0.784)EAER;RT(0.055)PS(0.945)EAER 94.76700000000001 0.0023529 1861758000.0 938257.0 829995.0 838890.0 872607.0 832572.0 781994.0 779938.0 769583.0 1023914.0 783608.0 True False 886210.0138410404 790120.7943521065 892966.1916714567 955539.3069211391 898090.6797133225 777113.285380055 858781.7445013489 766913.4961950224 837997.0283714514 776665.8427577993 1.141044146726306 1.0173239903875921 1.1497430973669396 1.2303094256446152 1.1563411576391278 1.0005761069917365 1.105728741014245 0.9874433172854002 1.078967275547842 1.0 19.5669344930321 -6.254667764602811 24.970577809107436 1.0382073981750348 1.1378701122687567 0.43542543182160076 0.0593649978210762 579.3410475487774 2136342.8933715587 0.02090481889513583 0.020447030082413765 5.563296868850779e-07 6.254667764602811 0.09966271409372185 RTPS(ph)PGPVESK ddPTM_KYSE-520_SHP099_60min_R1 7 RTPSPGPVESK 11 1 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 RT(0.007)PS(0.992)PGPVES(0.001)K;RTPS(1)PGPVESK;RT(0.001)PS(0.999)PGPVESK;RTPS(1)PGPVESK;RTPS(1)PGPVESK;RTPS(1)PGPVESK;RTPS(1)PGPVESK 201.65 3.0075e-07 6206500000.0 10942530.0 9757830.0 8758910.0 7534090.0 8716420.0 8606340.0 7872800.0 8842700.0 11128540.0 8559920.0 True False 10335526.047507247 9289049.199998574 9323523.3533515 8250127.648393249 9402352.664354302 8552624.639700264 8668659.45512364 8812026.737601696 9107877.663663976 8484085.768316982 1.2182250780755062 1.094879219006443 1.0989426094876737 0.9724238855767551 1.1082340420775212 1.0080785217470611 1.021755282990647 1.0386536603047294 1.0735249397968707 1.0 23.01632777492863 -3.777362161370572 0.9771677610131837 1.0349284786005375 1.5176055195195401 0.6691064432957377 0.03903158193884913 2.5729629899667374 1.0249301369940675 0.012041918446791321 1.6352559632451173 0.00016696976604042412 3.777362161370572 0.48267704091900265 RTPS(ph)TKPTVR ddPTM_KYSE-520_SHP099_60min_R1 1 RTPSTKPTVR 10 2 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 RT(0.136)PS(0.845)T(0.016)KPT(0.003)VR 85.45700000000001 0.0033022 2395500000.0 1040500.0 977710.0 1055100.0 1136700.0 1108100.0 922930.0 1076800.0 1076500.0 1208900.0 952260.0 True False 982781.3908146727 930739.3440273704 1123113.4342196886 1244731.6262386842 1195301.1657734506 917169.6515264995 1185653.452555271 1072765.87275699 989394.2338890255 943823.7172470703 1.041276429968547 0.9861368463404754 1.1899610210003704 1.3188179142915557 1.2664453583131876 0.9717594872501033 1.2562234142765196 1.1366167782750958 1.0482828687277266 1.0 19.84815789969925 -7.855116155123131 3.246299600345006 1.0033358208928305 1.1502814182613337 0.1649507370251574 0.11203535633856626 0.4439055973296634 8.695490779861965 0.11375977017871795 0.03079439374589644 1.395994942425349e-08 7.855116155123131 0.1469455973685032 RTPS(ph)VGK ddPTM_KYSE-520_SHP099_60min_R1 5 RTPSVGK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RT(0.199)PS(0.801)VGK;RT(0.056)PS(0.944)VGK;RT(0.003)PS(0.997)VGK;RT(0.026)PS(0.974)VGK;RT(0.006)PS(0.994)VGK 81.79899999999999 0.0090114 2818800000.0 4483750.0 4430760.0 4894160.0 5351590.0 5139490.0 6569100.0 7474100.0 10706900.0 11634800.0 7544600.0 True False 4235027.449365975 4217899.638893647 5209645.384532866 5860203.5045858035 5543938.62330204 6528099.810216073 8229654.968186612 10669760.26290925 9522213.609440016 7477760.713609981 0.5663496883041426 0.5640591883632773 0.6966852222284933 0.7836842778239581 0.7413902150160719 0.8730019667966283 1.1005507241236185 1.426865698375402 1.273404428696014 1.0 22.83417487539434 -6.629478008324016 1.5305433769159396 1.268281178486904 0.6575492343348845 0.8181219349265882 0.11850252240135678 0.15502297838280812 0.7408870419841012 0.06460833582982281 0.04347663275850356 2.3470481088078296e-07 6.629478008324016 -0.6107319441520194 RTQAPTKAS(ph)E ddPTM_KYSE-520_SHP099_60min_R1 8 RTQAPTKASE 10 2 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 1 RTQAPTKAS(1)E;RTQAPT(0.019)KAS(0.981)E;RTQAPT(0.087)KAS(0.913)E;RTQAPT(0.092)KAS(0.908)E;RTQAPTKAS(1)E;RTQAPTKAS(1)E;RTQAPTKAS(1)E;RTQAPTKAS(1)E 163.33 5.0905e-05 51528800000.0 18036870.0 16558040.0 15816670.0 14816110.0 15701750.0 15031700.0 14316620.0 14710720.0 18844010.0 15257920.0 True False 17036328.865491077 15762566.904275244 16836237.855766762 16224228.639774086 16937388.39426341 14937881.584574 15763883.666346418 14659691.945827855 15422412.802834924 15122746.699282145 1.1265366804232573 1.0423084653678336 1.1133055516010166 1.0728361032817026 1.119994186973151 0.987775691917334 1.0423955369889721 0.9693802480024167 1.0198155870432588 1.0 23.850216859957644 -6.266052255193014 24.998803539270696 1.0043673084864682 1.0918551720361114 0.7095999860217155 0.0291111289512881 214.71474232586374 1163612.306404673 0.00940748338871439 0.00856862478910662 5.419356796782831e-07 6.266052255193014 0.08748786354964322 RTQAPTKASE ddPTM_KYSE-520_SHP099_60min_R1 1 RTQAPTKASE 10 2 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 0 99.439 0.024390000000000002 326360000.0 238300.0 157480.0 261880.0 156290.0 194830.0 162780.0 224010.0 247520.0 417080.0 209100.0 False True 225081.02396072703 149914.42441770073 278761.20382281503 171143.75460969826 210162.0125689391 161764.0296398248 246655.11692691865 246661.41089160217 341348.78573118895 207247.53667733812 1.0860492123057353 0.7233592583109983 1.3450640151965516 0.8257939146275619 1.0140627769976271 0.7805353551278816 1.1901473999709529 1.1901777692809308 1.6470583496615059 1.0 17.660995428536566 -7.0517396016928044 2.9382377015433456 1.313940636170707 0.9657746115106128 0.2865639587235388 0.22480456578339192 0.31434165359240757 5.353211564597985 0.11127506535944791 0.06136609025450483 8.876881007564685e-08 7.0517396016928044 -0.3481660246600943 RTS(ph)ADVEIR ddPTM_KYSE-520_SHP099_60min_R1 2 RTSADVEIR 9 1 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 RT(0.262)S(0.738)ADVEIR;RT(0.072)S(0.928)ADVEIR 137.95 0.00029361 1074070000.0 288960.0 312670.0 368380.0 446310.0 463610.0 640890.0 885240.0 1119960.0 1043460.0 858170.0 True False 272930.81277252117 297648.8638727621 392126.36422884016 488727.1682120053 500093.46941993356 636889.9677839256 974728.6983098331 1116075.1201606283 853993.9674860138 850567.2814461576 0.32088092115238287 0.34994158647472473 0.46101745597612953 0.5745896637136784 0.5879528643162256 0.7487825850778882 1.1459748329991872 1.3121538348654171 1.0040287066227496 1.0 19.69806583468707 -6.38619931281992 1.3014623901128062 1.1558207131044222 0.4095917606376129 0.8849736921125899 0.11169342505628206 0.13763978175810426 0.4735343366833598 0.05949411524585732 0.04819759845302578 4.109610735108812e-07 6.38619931281992 -0.7462289524668093 down RTS(ph)DPALCTLIVSAAADSAVR ddPTM_KYSE-520_SHP099_60min_R1 1 RTSDPALCTLIVSAAADSAVR 21 1 Q6IA86-4;Q6IA86-7;Q6IA86-2;Q6IA86-3;Q6IA86-5;Q6IA86;Q6IA86-6 Q6IA86-4 ELP2 Elongator complex protein 2 1 RT(0.183)S(0.817)DPALCTLIVSAAADSAVR 154.55 4.0875e-07 150410000.0 50928.0 60571.0 51768.0 38762.0 44532.0 51802.0 39483.0 41343.0 59376.0 47959.0 True False 48102.922317549 57661.07824107541 55105.04811172864 42445.92882577974 48036.41504757989 51478.68450302374 43474.326956946265 41199.59078252872 48594.815147154266 47534.1205715374 1.011966177961693 1.2130460719115914 1.1592735376012107 0.8929570656913681 1.0105670299566507 1.082983841587011 0.9145920116796676 0.866737204499757 1.022314383076059 1.0 15.536675848945874 -5.250060317382514 24.883033876202525 0.9685556119742001 1.1365903578628629 0.4670082433646373 0.07721588580915544 603.9818997963089 1320748.1904059146 0.02143136835692583 0.03669905221223434 5.622632293293493e-06 5.250060317382514 0.16803474588866274 RTS(ph)EEDTPK ddPTM_KYSE-520_SHP099_60min_R1 2 RTSEEDTPK 9 1 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 RT(0.008)S(0.975)EEDT(0.017)PK;RT(0.197)S(0.67)EEDT(0.132)PK 157.03 7.9796e-05 339710000.0 1824630.0 1528430.0 1474330.0 1573450.0 1658870.0 1726550.0 1649590.0 1613080.0 2013360.0 1719340.0 True False 1723414.1365902713 1455001.928579799 1569367.6708114052 1722990.214925007 1789413.6313208207 1715773.9610187954 1816346.6556469603 1607484.601975701 1647784.5766753324 1704107.9852262787 1.0113291830866158 0.8538202632661201 0.9209320561942076 1.0110804185312359 1.0500588265732553 1.0068457960960542 1.065863590449509 0.9432997297775425 0.9669484510141138 1.0 20.700585327901027 -5.260383952958256 23.958030793368717 1.0082649338327998 0.9212064711640676 0.3441247329068835 0.04871672612621233 54.389647963663066 1234601.498579845 0.013540095262665312 0.021861133127344976 5.490552480656287e-06 5.260383952958256 -0.08705846266873218 RTS(ph)FLEGTLR ddPTM_KYSE-520_SHP099_60min_R1 4 RTSFLEGTLR 10 1 E9PEW5;A0A0A0MQX1;Q9HD67-3;Q9HD67 E9PEW5 MYO10 Unconventional myosin-X 1 RT(0.029)S(0.971)FLEGTLR;RT(0.029)S(0.971)FLEGTLR;RT(0.093)S(0.907)FLEGTLR;RT(0.017)S(0.983)FLEGTLR 176.56 1.6613e-05 1990570000.0 909990.0 757021.0 573115.0 565615.0 500474.0 567856.0 598003.0 624656.0 720491.0 780210.0 True False 859511.040679909 720652.5748483131 610058.9099164217 619370.8795416495 539858.4564924655 564311.8000685116 658454.9791868583 622489.2141318065 589667.9965000721 773297.946394194 1.1114875510632318 0.9319209732919107 0.7889053795643212 0.8009472706215113 0.6981247771441369 0.7297469270413007 0.8514893673999313 0.8049797843566086 0.7625366125044443 1.0 19.560664856201942 -4.41305550348626 2.08171053013732 0.7915689526549196 1.1498577614737684 0.5936864702261422 0.0783003136162123 0.3148074829436391 1.92417782832001 0.02025746997935187 0.18838869243871945 3.863176019299985e-05 4.41305550348626 0.35828880881884884 RTS(ph)FSFQK ddPTM_KYSE-520_SHP099_60min_R1 3 RTSFSFQK 8 1 Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7;H0Y7F8;Q9BPZ7-4 Q9BPZ7-3 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 RT(0.185)S(0.814)FS(0.001)FQK;RT(0.282)S(0.718)FSFQK;RT(0.172)S(0.823)FS(0.006)FQK 162.1 0.00013524 2614850000.0 3456420.0 3277910.0 2867660.0 3093560.0 3092360.0 3041220.0 2831900.0 3276890.0 3520450.0 3316700.0 True False 3264685.4923975547 3120434.2833567807 3052513.952018227 3387571.012287271 3335711.1388784284 3022238.617896719 3118176.088680603 3265523.233421873 2881225.023322544 3287316.6183535513 0.9931156232929789 0.9492344807722375 0.9285731514194927 1.030497334322464 1.0147215878916815 0.9193634105772275 0.9485475391300574 0.993370463675448 0.8764671486878566 1.0 21.648478985806353 -6.267663339810872 24.90903101776161 0.9471977324479459 0.9809295276685345 0.14780756795525363 0.042652698230239885 1097.871003975695 4393795.5697457865 0.015045149816786684 0.013564810850980033 5.399290072135775e-07 6.267663339810872 0.033731795220588556 RTS(ph)FSTSDVSK ddPTM_KYSE-520_SHP099_60min_R1 4 RTSFSTSDVSK 11 1 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 RT(0.056)S(0.555)FS(0.166)T(0.166)S(0.056)DVSK;RT(0.002)S(0.681)FS(0.198)T(0.057)S(0.057)DVS(0.005)K;RT(0.293)S(0.665)FS(0.024)T(0.006)S(0.012)DVSK;RT(0.145)S(0.744)FS(0.059)T(0.017)S(0.034)DVS(0.002)K 193.11 7.205800000000001e-07 10051340000.0 9905300.0 8289800.0 8225900.0 7828880.0 7736510.0 7929950.0 8037500.0 8395500.0 9700700.0 8652700.0 True False 9355833.263274001 7891545.564756513 8756154.675905364 8572934.401361398 8345329.322279523 7880456.240584399 8850008.938440733 8366377.970024429 7939297.414746679 8576043.809698725 1.0909264773919887 0.9201848474505101 1.0210016261814043 0.9996374309172943 0.9730977951443899 0.9188917892038191 1.0319453975307562 0.975552149181283 0.9257528985297458 1.0 23.03188084497453 -4.242969825352669 24.604409508498716 0.9755724384863201 1.0909266013605188 0.44711744446889945 0.03896940461762736 3139.708606307266 4182518.8617549143 0.009467891123417758 0.3074761101508275 5.7151834421159124e-05 4.242969825352669 0.11535416287419864 RTS(ph)FYLPK ddPTM_KYSE-520_SHP099_60min_R1 2 RTSFYLPK 8 1 Q9NS23-4;Q9NS23-2;Q9NS23-5;Q9NS23;Q9NS23-3 Q9NS23-4 RASSF1 Ras association domain-containing protein 1 1 RT(0.027)S(0.972)FYLPK;RT(0.198)S(0.8)FY(0.002)LPK 109.83 0.0020015999999999996 1574870000.0 1704010.0 1712060.0 1535850.0 1316480.0 1968470.0 1670280.0 1345650.0 1571850.0 1761060.0 1735110.0 True False 1609485.168440282 1629810.0677455494 1634853.348446887 1441597.8633858562 2123377.389937785 1659855.1629610928 1481681.4342784162 1566397.6192225474 1441295.8967099076 1719738.2752951528 0.9358896010871489 0.9477082013923489 0.950640787573506 0.8382658478299203 1.2347096185745805 0.9651789384499322 0.8615737961778633 0.9108348879155532 0.8380902590904671 1.0 20.71375758909766 -6.650778372217735 6.814442368660489 0.8957284829653565 0.9823467065371728 0.11708026591767962 0.10221209966652858 0.4667851414253212 26.27601969307303 0.04007258412714927 0.030864624650034627 2.2347123432081498e-07 6.650778372217735 0.08661822357181637 RTS(ph)IETNIR ddPTM_KYSE-520_SHP099_60min_R1 1 RTSIETNIR 9 1 P14859-6;P14859-2;P14859;P14859-3;P14859-5;P14859-4;A0A0C4DG88;A0A0A0MT46;Q9UKI9;Q9UKI9-2;H0YLC5;Q9UKI9-3 P14859-6 POU2F1;POU2F3 POU domain, class 2, transcription factor 1;POU domain protein;POU domain, class 2, transcription factor 3 1 RT(0.145)S(0.855)IETNIR 123.95 0.00033173 0.0 39212.0 36841.0 34678.0 36353.0 41224.0 36523.0 35886.0 34336.0 44178.0 31861.0 True False 37036.83219281594 35071.103060531605 36913.3993667618 39807.978190072005 44468.09426752524 36295.04640948104 39513.70709360925 34216.89643008265 36156.388836751896 31578.736327482915 1.1728408574912752 1.1105923522978116 1.1689321252109806 1.2605944005247351 1.4081657291911562 1.1493508173692666 1.2512757535272412 1.083542294892394 1.1449599648889388 1.0 14.946665820204528 -7.837720998145269 1.0961704870723028 1.0101318122008867 1.2179350882083997 0.38282929338440885 0.08323315163356079 0.5334048582442645 1.3910105975978397 0.08421065864630503 0.027865474301790674 1.4530447908516649e-08 7.837720998145269 0.20780327600751303 RTS(ph)IHDFLTK ddPTM_KYSE-520_SHP099_60min_R1 3 RTSIHDFLTK 10 1 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y5D7;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 RT(0.003)S(0.997)IHDFLTK;RT(0.013)S(0.987)IHDFLTK;RT(0.377)S(0.623)IHDFLTK 168.67 3.2878e-05 3371340000.0 4744900.0 4067910.0 3848200.0 3462790.0 3525720.0 3729670.0 3334110.0 3254720.0 3970910.0 3788490.0 True False 4481690.938276351 3872481.4975426095 4096261.129337697 3791892.520474226 3803174.1053973148 3706391.7460791566 3671154.3765778746 3243430.135977361 3249892.842495055 3754926.9260006165 1.1935494422656616 1.031306753462497 1.0909030215670898 1.0098445576177915 1.0128490328433866 0.9870742677879074 0.9776899654577385 0.863779828448472 0.8655009555556186 1.0 21.840353401292127 -4.962920238782025 0.4452329153652246 0.9088840865984914 1.2263889451147079 0.6798056048964624 0.05191474060239699 1.685853904048477 0.4083343180933322 0.042447898445746896 0.2666722370760994 1.0891301013242091e-05 4.962920238782025 0.31750485851621646 RTS(ph)LCLK ddPTM_KYSE-520_SHP099_60min_R1 1 RTSLCLK 7 1 P29374-3;P29374-2;P29374;C9J1W3 P29374-3 ARID4A AT-rich interactive domain-containing protein 4A 1 RT(0.188)S(0.812)LCLK 74.376 0.016931 0.0 254450.0 238860.0 207770.0 223090.0 254720.0 255260.0 215930.0 241230.0 284260.0 229730.0 True False 240335.15126650018 227384.80706383032 221163.18664375393 244292.40652554552 274765.0148414522 253666.82765611052 237758.31167371786 240393.22943350553 232645.54961146048 227694.77092723548 1.055514583351166 0.9986386869485719 0.9713142982735916 1.0728942326199233 1.2067251861890977 1.1140652313758006 1.044197504868034 1.055769653622516 1.021743049539803 1.0 17.796741634405112 -5.362262707386276 7.054568055342468 1.082430251218418 1.0078011555893043 0.204178086350858 0.05729511499219992 0.37885126232322786 22.96269248134534 0.017366395530065876 0.02584400412966852 4.342474657615751e-06 5.362262707386276 -0.0746290956291138 RTS(ph)MGGTQQQFVEGVR ddPTM_KYSE-520_SHP099_60min_R1 6 RTSMGGTQQQFVEGVR 16 1 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y6G0 A0A2R8Y804 CTNNB1 Catenin beta-1 1 RT(0.485)S(0.515)MGGTQQQFVEGVR;RT(0.006)S(0.994)MGGTQQQFVEGVR;RT(0.149)S(0.835)MGGT(0.017)QQQFVEGVR;RT(0.007)S(0.992)MGGT(0.001)QQQFVEGVR;RT(0.004)S(0.995)MGGT(0.001)QQQFVEGVR;RT(0.208)S(0.792)MGGTQQQFVEGVR 203.25 1.007e-12 15147060000.0 5420810.0 7132780.0 5342470.0 6842110.0 6479980.0 7070720.0 7090000.0 6780760.0 9667460.0 6441240.0 True False 5120106.863183173 6790110.542278944 5686854.16445423 7492382.0772446105 6989917.559957266 7026589.013729591 7806726.39173187 6757239.126201277 7912092.960834469 6384175.6248088945 0.8019996886185975 1.0635845473756371 0.8907734527783235 1.173586460893906 1.094881778125661 1.1006258954443984 1.2228245039805838 1.0584356576818874 1.239328838337105 1.0 22.606068909098052 -3.2515761215716914 0.5842651997971897 1.1369063197393647 6.674569409567503e-12 0.507967523982849 0.09227333435901423 8.38960522444172 0.8957210764928448 0.04142679734711159 8.375473509082537 0.0005603042006558161 3.2515761215716914 -1.13690631973269 RTS(ph)MSEGIK ddPTM_KYSE-520_SHP099_60min_R1 1 RTSMSEGIK 9 1 A0A0C4DGC9;Q8TDR2 A0A0C4DGC9 STK35 Serine/threonine-protein kinase 35 1 RT(0.132)S(0.695)MS(0.173)EGIK 76.24 0.016619 579450000.0 793280.0 728780.0 619500.0 665960.0 715080.0 737140.0 685610.0 770960.0 799120.0 696520.0 True False 749275.1770355258 693768.3148789185 659433.9612350457 729252.6381718249 771352.7277513564 732539.2358318007 754918.149708785 768285.719703417 654019.9521758608 690349.37468436 1.0853564941347382 1.0049524781508228 0.9552177280330711 1.056353007497475 1.1173367515600816 1.061113781940819 1.0935305765344496 1.1128940618722092 0.9473753090236234 1.0 19.396967145834104 -3.809819204030993 11.13698268168961 1.0450875479259794 6.371543313749936 0.04500302798180367 0.05815163844680808 221264.30496352987 64445.04093676448 0.015105828974450236 29845038.046294 0.00015494615225597667 3.809819204030993 5.326455765823956 RTS(ph)NERPGSGQGQGR ddPTM_KYSE-520_SHP099_60min_R1 4 RTSNERPGSGQGQGR 15 2 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 RT(0.067)S(0.933)NERPGSGQGQGR;RT(0.205)S(0.795)NERPGSGQGQGR;RT(0.23)S(0.77)NERPGSGQGQGR;RT(0.035)S(0.961)NERPGS(0.004)GQGQGR 213.64 2.5952e-14 10315620000.0 4807242.0 4922970.0 4259709.0 4575161.0 4225326.0 4560498.0 4243756.0 3981543.0 5548629.0 4303785.0 True False 4540574.703260662 4686463.131671377 4534296.6579153845 5009982.925867692 4557835.117383687 4532034.240351158 4672756.271547307 3967731.9566321196 4541137.843154465 4265656.813194062 1.0644491345896028 1.0986498297696439 1.0629773693679236 1.1744927323668801 1.0684955018617277 1.062446989718715 1.0954365238886659 0.9301573310725716 1.064581151748616 1.0 22.024336469878584 -7.232364366688067 24.7617673348496 0.998026925341878 1.090304113544306 0.4810098196158916 0.04346288566612988 488.66192636937956 416170.01941121236 0.019635873652025185 0.011334353041886316 5.8564660944027166e-08 7.232364366688067 0.09227718820242792 RTS(ph)PQVLGSILK ddPTM_KYSE-520_SHP099_60min_R1 3 RTSPQVLGSILK 12 1 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 RT(0.026)S(0.974)PQVLGSILK;RT(0.267)S(0.733)PQVLGSILK;RT(0.339)S(0.661)PQVLGSILK 165.66 1.9109e-06 9749570000.0 4204390.0 4036810.0 3722220.0 3232460.0 3428280.0 3779270.0 3406640.0 3719930.0 4417120.0 3567700.0 True False 3971164.1054563294 3842875.588224656 3962160.2569625713 3539672.0265254634 3698066.1317550815 3755682.1740809698 3751016.416802455 3707026.4310681885 3615082.3545337827 3536092.9536286006 1.1230372497366834 1.0867575141884342 1.120490979428795 1.0010121546418032 1.0458056901361346 1.062099391427772 1.060779924620847 1.0483396448230193 1.0223380442598733 1.0 21.7537247688206 -1.0000000000000002 0.2765661873242614 1.023205013598034 1.7778559360670931 0.564477913576042 0.027292516677511928 42.08587993819709 0.5915949697896963 0.03191558513964467 15.285899559162997 0.09999999999999995 1.0000000000000002 0.7546509224690592 RTS(ph)PSSLPGR ddPTM_KYSE-520_SHP099_60min_R1 2 RTSPSSLPGR 10 1 H0Y4R5;Q5SNT2 H0Y4R5 TMEM201 Transmembrane protein 201 1 RT(0.202)S(0.798)PSSLPGR;RT(0.237)S(0.461)PS(0.035)S(0.267)LPGR 109.16 0.00078788 1855050000.0 894239.0 1180185.0 1069942.0 1137240.0 1216590.0 1023850.0 1208490.0 1188861.0 1494190.0 1056125.0 True False 844633.7800487488 1123487.1411061995 1138912.1732877293 1245322.9476763254 1312328.71154979 1017459.7723721258 1330655.9629258157 1184737.1186732447 1222882.761464672 1046768.5541528156 0.8068964019771676 1.0732908785318591 1.0880267359669478 1.1896831852043994 1.253695199710982 0.9720007047743133 1.2712036081392983 1.131804269409002 1.1682456036849438 1.0 19.997511059646975 -4.02166219591084 1.4995958155625047 1.1470223283959016 0.4897162891362122 0.532157099290621 0.09166271240591227 1.5296426714762015 2.0297700709197106 0.024435161872444197 1.7641119504436986 9.513444832419098e-05 4.02166219591084 -0.6573060392596894 RTS(ph)QEGPGDSVK ddPTM_KYSE-520_SHP099_60min_R1 1 RTSQEGPGDSVK 12 1 Q9NSK0-5;Q9NSK0;Q9NSK0-3 Q9NSK0-5 KLC4 Kinesin light chain 4 1 RT(0.378)S(0.475)QEGPGDS(0.147)VK 154.19 1.1375e-05 0.0 890430.0 831370.0 800580.0 715970.0 807860.0 756830.0 745170.0 791130.0 991560.0 767360.0 True False 841036.0728718011 791429.7372881895 852186.6677732898 784015.5735357704 871433.9859053692 752106.3432381665 820499.0557583683 788385.7546811305 811517.6991934829 760561.7873970466 1.1058090043547553 1.0405857228204767 1.120470002430468 1.0308374500630544 1.1457767144570496 0.9888826334704272 1.0788065734494126 1.0365834410105048 1.0669977280489311 1.0 19.53670593047385 -6.269862818643927 24.999723814013656 1.0393250758372454 1.0845738818202615 0.30075707079010405 0.04090329630389177 926.5640991826939 2749915.1733362605 0.013264509197553277 0.0118666972124444 5.372014563351618e-07 6.269862818643927 0.04524880598301606 RTS(ph)S(ph)EDNLYLAVLR ddPTM_KYSE-520_SHP099_60min_R1 5 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 2 RT(0.234)S(0.792)S(0.974)EDNLYLAVLR;RT(0.132)S(0.869)S(1)EDNLYLAVLR;RT(0.275)S(0.729)S(0.997)EDNLYLAVLR;RT(0.593)S(0.678)S(0.728)EDNLYLAVLR;RT(0.437)S(0.568)S(0.996)EDNLYLAVLR 180.76 3.1672e-09 1316701000.0 376590.0 370882.0 324543.0 382377.0 370362.0 356647.0 348851.0 369354.0 421138.0 365276.0 True False 355699.8019864473 353064.27201476844 345463.5610671601 418717.99511416326 399507.3823284778 354421.03378151247 384116.2635376665 368072.7971818718 344669.95522504475 362039.93882042804 0.9824877419473727 0.9752080755650787 0.9542139527277684 1.1565519441816268 1.1034898073127606 0.9789556227864281 1.060977594873002 1.0166635161333293 0.9520219132398019 1.0 18.465789332960412 RTS(ph)SEDNLYLAVLR ddPTM_KYSE-520_SHP099_60min_R1 4 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 1 RT(0.138)S(0.729)S(0.133)EDNLYLAVLR;RT(0.151)S(0.424)S(0.424)EDNLYLAVLR;RT(0.094)S(0.657)S(0.249)EDNLYLAVLR;RT(0.353)S(0.554)S(0.093)EDNLYLAVLR 249.12 6.0776e-19 19011190000.0 2225920.0 3025730.0 3096040.0 1873419.0 2124589.0 1939936.0 1408118.0 1459874.0 3312960.0 1749694.0 True False 2102443.780338491 2880369.3890866796 3295615.69223915 2051468.1784960371 2291782.0670421855 1927828.1398412776 1550464.309347346 1454810.0378311523 2711409.9769252907 1734193.072401334 1.2123470066843485 1.660927744970309 1.900374153655058 1.1829525853516256 1.3215264802486835 1.1116571565885784 0.8940551856780403 0.838897387484474 1.5634994857699471 1.0 20.72583309596339 -5.408761343457908 6.521496512613612 1.1146559484879166 1.596869599713119 0.4169223176475061 0.25036512038177194 0.2335574062585411 11.828844537903242 0.07236147655952867 0.10763941195518716 3.901563292132726e-06 5.408761343457908 0.48221365122520243 RTS(ph)SEELR ddPTM_KYSE-520_SHP099_60min_R1 4 RTSSEELR 8 1 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 RT(0.005)S(0.912)S(0.084)EELR;RT(0.013)S(0.843)S(0.144)EELR;RT(0.019)S(0.92)S(0.061)EELR;RT(0.004)S(0.866)S(0.13)EELR 136.67 0.00073761 4042910000.0 2288610.0 2166090.0 2093120.0 1786890.0 2031400.0 2058890.0 1885220.0 2078110.0 2437650.0 2168350.0 True False 2161656.2410690747 2062027.7850326262 2228045.8643104136 1956715.488351934 2191259.6229150672 2046039.7038035307 2075796.4355741506 2070901.521444521 1995034.2081558292 2149140.1059507714 1.0058237874225358 0.9594664300028932 1.0367150369308913 0.9104643680204788 1.019598311365402 0.9520271378018748 0.9658730158291966 0.9635954006490247 0.9282941594323064 1.0 21.0353281067998 -5.259747361581407 0.7478162701173426 0.9618357211701215 0.99765172300958 0.0867924110792071 0.03663265957605751 2.5295604061936805 2.4527214305716556 0.0172217695732937 0.06153128720822576 5.498606465755172e-06 5.259747361581407 0.035816001839458544 RTS(ph)SLDTITGPYLTGQWPR ddPTM_KYSE-520_SHP099_60min_R1 1 RTSSLDTITGPYLTGQWPR 19 1 Q86VQ1;H7C2L5;H7C0Q2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 RT(0.1)S(0.45)S(0.45)LDT(0.001)ITGPYLTGQWPR 215.51 8.556600000000001e-19 831610000.0 96609.0 101270.0 131620.0 86380.0 96173.0 103310.0 58636.0 71462.0 131510.0 91573.0 True False 91249.9061847331 96404.83719063096 140104.43579944593 94589.52922890591 103741.2679504827 102665.20396910122 64563.499112212914 71214.11500135614 107631.09909731627 90761.73446271587 1.0053786072391309 1.0621749106197746 1.5436509298640564 1.042174103314018 1.1430066708685334 1.1311507495625834 0.7113515348115679 0.7846270834611504 1.185864282282201 1.0 16.469796558820267 -6.619283625516013 8.593008036866795 0.9030207888872154 1.1655579868792767 0.28058249186719453 0.18309710858589648 0.3323412046067084 26.511704705071367 0.0713240425766779 0.05514931012406703 2.402793090882755e-07 6.619283625516013 0.2625371979920613 RTS(ph)SPHKEES(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 1 RTSSPHKEESPKK 13 3 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 RT(0.382)S(0.463)S(0.157)PHKEES(0.998)PKK 59.983000000000004 0.041538 1422200000.0 728120.0 660810.0 430140.0 755040.0 676720.0 766260.0 499090.0 518590.0 665250.0 573630.0 True False 687729.7321287651 629063.6957039684 457867.5126483333 826798.7745889473 729974.0139899009 761477.487110285 549542.8878490068 516791.13232981646 544457.3695877856 568548.0844773871 1.2096245698566208 1.106438862215511 0.8053276849383951 1.4542284059385158 1.2839266087069794 1.3393370022699833 0.966572402322224 0.9089664470593618 0.9576276562223477 1.0 19.116922843437326 -6.852213296797078 8.431684357989589 0.9484030291966156 1.1927545268716397 0.3487838853983357 0.16138455592131637 0.33275965666862467 27.46126530389686 0.0726343890296474 0.04894284410749636 1.405357135900027e-07 6.852213296797078 0.24435149767502418 RTS(ph)VPSPEQPQPYR ddPTM_KYSE-520_SHP099_60min_R1 1 RTSVPSPEQPQPYR 14 1 Q8TEH3 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 RT(0.305)S(0.695)VPSPEQPQPYR 192.16 5.4558e-11 466520000.0 125070.0 116780.0 103340.0 110500.0 116740.0 109470.0 101100.0 100740.0 131060.0 109370.0 True False 118132.1177791363 111169.71350964629 110001.461749846 121001.88677696358 125926.7738402603 108786.75712416517 111320.17464091549 100390.55645289268 107262.80775373935 108401.06688857247 1.0897689586447203 1.025540769113645 1.014763644927209 1.1162425818312631 1.1616746721663065 1.003557992985338 1.0269287732688426 0.9261030295586117 0.989499557822589 1.0 16.72601943027323 -6.666415588323729 2.4048597406671326 0.9744848962969412 1.0759556920185664 0.47226330237649705 0.047276183448997776 0.27491612223859835 3.240368390177379 0.022719700626729684 0.016071320423568566 2.155680591854032e-07 6.666415588323729 0.1014707957216252 RTSEEDT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 RTSEEDTPK 9 1 A0A1B0GW41;Q8WYH8-2;Q8WYH8 A0A1B0GW41 ING5 Inhibitor of growth protein 5 1 RT(0.095)S(0.095)EEDT(0.809)PK 138.63 0.00051915 417710000.0 1004200.0 843100.0 786170.0 860200.0 907760.0 918530.0 913440.0 933080.0 1000800.0 882160.0 True False 948495.0241769302 802596.2104810996 836847.7761164741 941953.1493714398 979195.5475521222 912797.1135585968 1005779.4295153115 929843.3632625092 819079.9481149279 874344.7487100939 1.08480668017533 0.9179402194216368 0.9571142016362099 1.0773246488425618 1.119919286982295 1.0439784935006826 1.1503236349267505 1.0634745215022925 0.9367928947057813 1.0 19.737842712042667 -5.265588745539415 24.818421859782955 1.0647140176344758 0.9797523509865766 0.16735700370446993 0.068475186601368 453.40236251373335 2711918.985160356 0.019132766553913792 0.0295759100858209 5.425143803582416e-06 5.265588745539415 -0.08496166664789917 RTSFS(ph)TSDVSK ddPTM_KYSE-520_SHP099_60min_R1 2 RTSFSTSDVSK 11 1 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 RT(0.029)S(0.137)FS(0.278)T(0.278)S(0.278)DVS(0.001)K;RTS(0.009)FS(0.661)T(0.066)S(0.261)DVS(0.003)K 205.37 1.1744000000000001e-07 3723140000.0 6627500.0 5961700.0 5254300.0 5281800.0 5143900.0 5079700.0 5336400.0 5650600.0 6620600.0 5712300.0 True False 6259859.363406302 5675290.983305869 5593000.585177245 5783780.683968918 5548695.665212575 5047995.708080963 5875855.390245126 5630999.387459957 5418465.931744297 5661693.4661021475 1.105651409933355 1.0024016696214892 0.9878670787572336 1.0215637279901737 0.9800416957282982 0.8916052658633794 1.0378264781421345 0.9945786399730111 0.9570397910423605 1.0 22.43280221067208 RTSFSTSDVS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 RTSFSTSDVSK 11 1 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 RTSFS(0.005)T(0.019)S(0.182)DVS(0.794)K 207.73 1.6481e-09 5714800000.0 6865300.0 6151100.0 5468600.0 5442800.0 5544800.0 4842800.0 5854200.0 6038600.0 7158400.0 5998500.0 True False 6484468.12336375 5855591.923010672 5821114.706069368 5960082.075562504 5981144.214403589 4812574.288854553 6445999.667486129 6017653.506019842 5858615.008579045 5945357.9567623865 1.0906774950342841 0.9849014921549657 0.9791024776646625 1.0024765739770758 1.0060191931085494 0.8094675415431666 1.084207160336629 1.0121599994118478 0.9854099704653311 1.0 22.503332243365637 -4.26150043874312 7.735501611167058 0.9838313484710383 1.0916909721206192 0.19188087806180743 0.06512049032217158 0.16470494341032843 107.33543340637506 0.016124984558845493 0.09306220875613674 5.4764554770633227e-05 4.26150043874312 0.1078596236495809 RTSMGGT(ph)QQQFVEGVR ddPTM_KYSE-520_SHP099_60min_R1 1 RTSMGGTQQQFVEGVR 16 1 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y6G0 A0A2R8Y804 CTNNB1 Catenin beta-1 1 RT(0.321)S(0.321)MGGT(0.357)QQQFVEGVR 111.95 0.00016 1107200000.0 189840.0 324820.0 233640.0 263930.0 227530.0 284230.0 217390.0 257820.0 358080.0 215290.0 True False 179309.1967633422 309215.1596352397 248700.80823721734 289013.8278465523 245435.31653138992 282456.0151402345 239365.9027219448 256925.68259564042 293061.69846222375 213382.69809308538 0.8403174126382118 1.4491107404610128 1.1655153414956114 1.3544389045098393 1.1502118903020058 1.3237062688982253 1.1217680948880147 1.2040605207998636 1.3734089084128998 1.0 17.703083675963445 -9.228648479544326 14.274500071246784 0.9999630662925176 1.2269537061344595 0.13939220827853427 0.16344911223031489 0.0 0.0 0.1439611046566037 0.03491569649881033 5.906789857100102e-10 9.228648479544326 0.2269906398419419 RTSS(ph)EDNLYLAVLR ddPTM_KYSE-520_SHP099_60min_R1 8 RTSSEDNLYLAVLR 14 1 Q15149-4 Q15149-4 PLEC Plectin 1 RT(0.001)S(0.002)S(0.998)EDNLYLAVLR;RT(0.001)S(0.001)S(0.998)EDNLYLAVLR;RT(0.006)S(0.208)S(0.785)EDNLYLAVLR;RT(0.001)S(0.021)S(0.979)EDNLYLAVLR;RT(0.029)S(0.051)S(0.92)EDNLYLAVLR;RT(0.011)S(0.005)S(0.984)EDNLYLAVLR;RT(0.233)S(0.04)S(0.727)EDNLYLAVLR;RT(0.048)S(0.012)S(0.94)EDNLYLAVLR 238.08 1.4776e-18 25769930000.0 3276780.0 4109120.0 4295230.0 2621100.0 2787530.0 2644800.0 2134574.0 2172536.0 4755660.0 2410523.0 True False 3095010.481301016 3911711.707285131 4572107.398410984 2870208.555937546 3006892.7521238714 2628292.822161255 2350357.571354675 2164999.9796897145 3892152.0244326964 2389167.641578516 1.2954346222670887 1.6372696663096753 1.9136821204351346 1.201342470066775 1.2585524346618164 1.1000872339057588 0.9837558195798269 0.9061733224627575 1.629082847389128 1.0 21.18807665676789 -5.400624926938657 6.756929947554819 1.139873740969317 1.6160585681613402 0.45113705223668255 0.23364980141296735 0.21956175204336492 11.210688853760605 0.06615637618695433 0.0983936842137947 3.975347272110622e-06 5.400624926938657 0.47618482719202326 RTSS(ph)PHKEES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 RTSSPHKEESPK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 RT(0.238)S(0.283)S(0.479)PHKEES(1)PK;RT(0.246)S(0.288)S(0.467)PHKEES(0.999)PK 70.235 0.013794999999999998 1665760000.0 1352990.0 1342010.0 998890.0 1509160.0 1373830.0 1423220.0 1000620.0 1199210.0 1406890.0 1503420.0 True False 1277936.947581303 1277537.8252019228 1063280.0476805097 1652590.1126545016 1481942.6049765693 1414337.1560633462 1101772.4347101175 1195050.2204077195 1151434.2408107633 1490100.8684430604 0.8576177456473548 0.8573498964112173 0.7135624642588682 1.1090458019672311 0.99452502603061 0.9491553129159126 0.7393945323052594 0.8019928353282378 0.7727223473225979 1.0 20.506978562747918 -9.268165811684574 11.729462729804801 0.9999999999999875 0.8691506986993857 0.10635883008925096 0.11610097145922939 0.0 0.0 0.12089411638741496 0.029321130081236876 5.393046790967964e-10 9.268165811684574 -0.1308493013006018 RTSS(ph)PHKEESPK ddPTM_KYSE-520_SHP099_60min_R1 1 RTSSPHKEESPK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 RT(0.29)S(0.29)S(0.419)PHKEESPK 62.861000000000004 0.021115000000000002 1036400000.0 135490.0 116400.0 62717.0 150020.0 140470.0 108690.0 98003.0 108910.0 149830.0 124630.0 True False 127974.09960738131 110807.96928003796 66759.83817074801 164277.85569484223 151524.18983502995 108011.62539349173 107910.0996571083 108532.21662978518 122624.64890693402 123525.87516067275 1.0360104669642913 0.8970425761882493 0.5404522581516793 1.3299064303828045 1.2266595127372237 0.8744048585205222 0.873582959981035 0.8786192891862941 0.9927041500206618 1.0 16.91445375151744 -5.257127748270325 24.999925978374886 1.0158707550613977 0.8317558847290222 0.20061939821181207 0.18269521481889417 721.7272623356658 4184742.170397271 0.054218418959607294 0.08987009933016694 5.531873645192336e-06 5.257127748270325 -0.1841148703323755 RTSS(ph)PPRK ddPTM_KYSE-520_SHP099_60min_R1 3 RTSSPPRK 8 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RT(0.273)S(0.273)S(0.454)PPRK;RT(0.113)S(0.113)S(0.774)PPRK;RT(0.007)S(0.372)S(0.621)PPRK 78.13600000000001 0.010105 4214990000.0 735498.0 865740.0 355275.0 576301.0 717757.0 1223489.0 600624.0 661356.0 637046.0 1888901.0 True False 694698.4597610867 824148.5508977663 378176.5949600982 631072.4737687858 774240.3924213103 1215852.7513208003 661340.9354453542 659061.9103976514 521374.5050228045 1872166.80668274 0.3710665402683914 0.4402110687765375 0.20199941245095718 0.3370813281787493 0.41355310309831494 0.6494361223480661 0.3532489375864818 0.35203161814701317 0.2784872069955235 1.0 20.836277551495954 -10.499505043538665 3.3755436313722633 1.0126573358616702 0.38055610589151284 0.7395891980744718 0.11080792799864041 922460167.1629581 1229858396.7731848 108743101.64914556 0.0303546261097941 3.165883697251184e-11 10.499505043538665 -0.6321012299701574 RTTDFS(ph)DFLSIVGCTK ddPTM_KYSE-520_SHP099_60min_R1 1 RTTDFSDFLSIVGCTK 16 1 Q9UHD1;E9PPQ5;E9PIZ4;E9PSD5 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 RT(0.3)T(0.3)DFS(0.399)DFLSIVGCTK 94.385 0.001085 157450000.0 130580.0 137230.0 132450.0 150360.0 151970.0 150760.0 120500.0 150090.0 158960.0 132530.0 True False 123336.4670952237 130637.26481357042 140987.9389274929 164650.16919261764 163929.17440898047 149819.0509184174 132681.31596666985 149569.37282126953 130096.87105550464 131355.88730677983 0.938948909135478 0.994529194633423 1.0733279019174646 1.2534662326027268 1.247977367212527 1.1405583258595569 1.0100903635692742 1.1386575500186935 0.9904152278433112 1.0 17.00312133724527 -7.771444175394571 24.728147264453618 0.9952075024574636 1.1037538965743632 0.15484467081314957 0.09727398609124224 412.0356695749363 1018358.1326385341 0.10031235055554674 0.027173674233273677 1.6926057995338223e-08 7.771444175394571 0.10854639411689959 RTVNSTRET(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 1 RTVNSTRETPPK 12 2 Q5SWC8;Q5SSJ5-2;Q5SSJ5;B0QZK7;B0QZK5;B0QZK6;B0QZK9;B0QZK8;Q5SSJ5-5 Q5SWC8 HP1BP3 Heterochromatin protein 1-binding protein 3 1 RTVNS(0.002)T(0.002)RET(0.996)PPK 75.462 0.038094 484260000.0 226520.0 171550.0 167850.0 143260.0 149190.0 165790.0 177030.0 187030.0 235750.0 181110.0 True False 213954.48404357492 163308.48049820022 178669.87956949574 156875.38732731025 160930.40422501665 164755.24311332198 194925.9200463034 186381.2365831303 192943.7427738751 179505.50630144795 1.1919104235403006 0.9097686408791958 0.9953448406727483 0.8739307810639837 0.8965207114859325 0.91782835249992 1.0859049622631607 1.0383037290796848 1.0748625306783626 1.0 17.453668573593507 -6.763304968460417 24.999972692054687 1.0529597887545312 0.9559761899397664 0.18450411220161256 0.08698064163571402 78.55235274238755 1052613.667585501 0.035099871255492084 0.025022875761395252 1.724626406712923e-07 6.763304968460417 -0.09698359881476482 RTVQS(ph)LEIDLDSMR ddPTM_KYSE-520_SHP099_60min_R1 2 RTVQSLEIDLDSMR 14 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 RT(0.204)VQS(0.796)LEIDLDSMR;RT(0.372)VQS(0.628)LEIDLDSMR 122.22 0.00037093 17016000.0 48086.0 50409.0 52922.0 43551.0 42784.0 52706.0 38930.0 42539.0 64775.0 53368.0 True False 45418.573722935515 47987.2759745484 56333.4367981939 47690.07394591438 46150.8573923394 52377.04230370198 42865.424320186394 42391.442137677215 53013.492844868575 52895.20103967575 0.8586520672994107 0.9072141712544773 1.0650009016118342 0.9015954757434972 0.872496114680091 0.9902040501635468 0.8103839947225799 0.801423216179482 1.0022363428603684 1.0 15.69084921813981 -5.461371662125081 24.99920896784431 0.9002867613655129 0.947200951770194 0.018682415074783965 0.08388508206434477 751.2805830595962 305352.2863577028 0.02381819088640377 0.03532801676707717 3.4564345519710607e-06 5.461371662125081 0.046914190404681144 RTYS(ph)LTTPAR ddPTM_KYSE-520_SHP099_60min_R1 2 RTYSLTTPAR 10 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 RT(0.29)YS(0.71)LTTPAR;RT(0.013)YS(0.987)LTTPAR 129.54 0.00024134 859850000.0 249470.0 275540.0 290070.0 224050.0 290710.0 277795.0 245250.0 272480.0 315500.0 273140.0 True False 235631.4017938841 262302.6448060278 308768.37632840953 245343.64463691117 313587.22308636334 276061.1783621769 270042.26340934273 271534.83047731034 258213.15310777366 270720.19209970464 0.8703872436197979 0.968906836138116 1.1405443160098379 0.9062628196811878 1.15834441699447 1.0197288064146512 0.9974958325601652 1.0030091526283553 0.9538008639291866 1.0 18.046442971726258 -4.39332951723959 4.000572672423684 1.0238172033232738 0.872989399896546 0.2864463272418125 0.0726083472867845 0.2748354503649086 6.8711512721218355 0.017489362577806224 0.08708073208995819 4.0426903961050533e-05 4.39332951723959 -0.15082780342672775 RVATPVDWK ddPTM_KYSE-520_SHP099_60min_R1 1 RVATPVDWK 9 1 P30041 P30041 PRDX6 Peroxiredoxin-6 0 103.31 0.0048264 418900000.0 561300.0 481110.0 307320.0 296860.0 480180.0 489970.0 337140.0 399440.0 393370.0 403540.0 False True 530163.5700761902 457996.75343916746 327130.3389293858 325073.4851457868 517967.4341495309 486911.9154848573 371221.4013693198 398054.4358699973 321943.9240507284 399964.94954936893 1.325525075818551 1.1450922235940464 0.8178975165147743 0.8127549314309651 1.295032064017391 1.2173864635724942 0.9281348322835944 0.99522329723761 0.8049303430549477 1.0 18.609514051119472 -6.801975188494274 24.64340520847471 0.9316737376716739 1.086901916733511 0.1886283403850869 0.1711650935069697 281.4352427649597 171093.43959696658 0.0785137497972536 0.05293476298877994 1.5777014021574683e-07 6.801975188494274 0.15522817906183706 RVDAENR ddPTM_KYSE-520_SHP099_60min_R1 2 RVDAENR 7 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;H0YAB0 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ; 115.49 0.006722199999999999 395326000.0 93830.0 124088.0 62454.0 49178.0 128734.0 183204.0 83252.0 74139.0 72790.0 400160.0 False True 88625.06285453223 118126.62622011482 66479.88476993305 53851.86233409516 138864.6334037354 182060.55587992666 91667.9246212215 73881.82911317261 59573.17088657643 396614.893719769 0.22345369338840532 0.29783709106894507 0.16761822569604476 0.1357787193240014 0.35012460601605944 0.45903610470201556 0.23112577483282837 0.1862810254558275 0.15020406906017064 1.0 18.597379329240596 -10.52923494405673 3.316616427122166 1.0206402848888363 0.2480052785093908 0.8497809596022945 0.09527072671186979 236254907.7048348 297495923.6699178 43909847.23639644 0.025886071797719273 2.956412677628805e-11 10.52923494405673 -0.7726350063794455 RVDDFK ddPTM_KYSE-520_SHP099_60min_R1 1 RVDDFK 6 1 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 0 97.602 0.031705000000000004 663920000.0 789360.0 723040.0 511100.0 545760.0 793590.0 783840.0 616540.0 797030.0 639280.0 744340.0 False True 745572.627249851 688304.0730948338 544046.3237889142 597628.8663112727 856041.0180905631 778947.7638093149 678865.8800505444 794265.2889582008 523202.8669373619 737745.7266877565 1.010609211655125 0.9329827990805178 0.7374442224579315 0.8100743178743117 1.1603469693195172 1.0558485608673633 0.9201895117690971 1.0766111686260782 0.7091913216310669 1.0 19.492764133463478 -4.25950305517696 21.357407087836293 0.9365181643041461 1.010609356060425 0.02618140596583496 0.13984640495444775 123.37144291221507 1359828.3921810666 0.036023666590555656 0.22300119108614375 5.5017005015812274e-05 4.25950305517696 0.07409119175627887 RVDDFKK ddPTM_KYSE-520_SHP099_60min_R1 2 RVDDFKK 7 2 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 0 ; 125.31 0.02494 7681500000.0 15018300.0 13918100.0 10579300.0 9411500.0 15356600.0 14444700.0 10606700.0 15495000.0 13764900.0 11859100.0 False True 14185204.960761178 13249453.584505983 11261258.605478493 10305966.13032934 16565077.052898252 14354545.26931061 11678928.747416412 15441251.461560203 11265541.144891273 11754037.600240197 1.2068367860650113 1.1272257274585566 0.9580757683851859 0.8768022088102505 1.4093095169748087 1.2212437766080713 0.9936099529899198 1.3136976404809746 0.9584401146258932 1.0 23.48665308272598 -4.308039295918981 4.718501954903359 1.1038842289275852 1.2094140998899938 0.03891259888814702 0.16377625171479054 0.7409625907228596 35.99446579727553 0.041697830605238635 0.21538635623036043 4.919950168772333e-05 4.308039295918981 0.10552987096240862 RVDIIPGFEFDR ddPTM_KYSE-520_SHP099_60min_R1 2 RVDIIPGFEFDR 12 1 A6NKB8;Q9H4A4 A6NKB8 RNPEP Aminopeptidase B 0 ; 92.039 0.0061402 542940000.0 212822.0 189499.0 132134.0 96197.0 230100.0 199857.0 134771.0 154363.0 163725.0 142965.0 False True 201016.3394098612 180395.18359620203 140651.5690618749 105339.53395731738 248207.5609100901 198609.61832981007 148394.96791820799 153827.55078159523 133996.6671713796 141698.44132508687 1.4186206815690106 1.2730922225343078 0.9926119705098928 0.7434064409759152 1.7516604882099465 1.4016358717323971 1.0472589996791697 1.0855980442909852 0.945646726374091 1.0 17.11246436321543 -6.883147168795807 8.068808101490763 1.0227923866485176 1.2498699460022902 0.18238326360657553 0.25239489836435086 0.517591261887128 34.3094024506612 0.11471742797454171 0.07724683212715254 1.3087383574148163e-07 6.883147168795807 0.2270775593537726 RVEDQSIWPSMDDDEEESGAKVDSPLPSDKAPT(ph)PPGK ddPTM_KYSE-520_SHP099_60min_R1 1 RVEDQSIWPSMDDDEEESGAKVDSPLPSDKAPTPPGK 37 3 Q12893 Q12893 TMEM115 Transmembrane protein 115 1 RVEDQSIWPSMDDDEEES(0.002)GAKVDS(0.002)PLPS(0.044)DKAPT(0.952)PPGK 79.44800000000001 0.0040343 1115600000.0 246910.0 311990.0 215570.0 204430.0 211170.0 238140.0 180830.0 244520.0 367330.0 162830.0 True False 233213.41009711768 297001.53209346236 229465.98712419506 223858.96573587938 227787.87760705684 236653.6799264522 199110.0611307296 243671.8171913972 300632.13163574797 161387.4528798232 1.4450529203827236 1.8403012551082512 1.4218328812405658 1.387090270905852 1.4114348640019654 1.4663697561586515 1.2337394114460463 1.5098560194319868 1.862797424900268 1.0 17.300168894615712 -4.812046321177876 24.700808592959838 1.424565805061673 1.6426773769899077 0.14457074222500244 0.223032450895648 158.0136262296322 77124.33973327074 0.05623438001379241 0.11706153039378767 1.5415360263321305e-05 4.812046321177876 0.21811157192823472 RVEEFK ddPTM_KYSE-520_SHP099_60min_R1 1 RVEEFK 6 1 C9J4N6;O75874 C9J4N6 IDH1 Isocitrate dehydrogenase [NADP] cytoplasmic 0 78.616 0.067011 6482100000.0 5241700.0 4624700.0 3151200.0 3087300.0 4654700.0 4425100.0 3267800.0 3722400.0 3570900.0 3752500.0 False True 4950932.45193011 4402522.470183772 3354331.394098269 3380716.06376941 5020998.408379818 4397481.3094925005 3598141.114654638 3709487.8632146907 2922514.5750635485 3719255.7694008187 1.331162135355837 1.183710597804095 0.9018824200516492 0.9089764924432857 1.350000838793809 1.182355175912235 0.9674357822490673 0.9973736933430363 0.7857794021878665 1.0 21.8265825333424 -6.865762495046329 4.961475042648009 0.9307590283901321 1.1322800732067313 0.30974937267641545 0.15023560486393422 0.3106775163459267 12.342488297843316 0.06977731491950864 0.04658569585670951 1.3621894266472987e-07 6.865762495046329 0.20152104481659916 RVEHHDHAVVSGR ddPTM_KYSE-520_SHP099_60min_R1 1 RVEHHDHAVVSGR 13 1 O95831-3;O95831;E9PMA0;O95831-5;O95831-2 O95831-3 AIFM1 Apoptosis-inducing factor 1, mitochondrial 0 153.24 8.8383e-06 301610000.0 69489.0 114260.0 59988.0 123780.0 55350.0 73778.0 82280.0 52128.0 79762.0 36890.0 False True 65634.30664711284 108770.77809224355 63854.9224641936 135544.01398418588 59705.73010157969 73317.52413544053 90597.66537541582 51947.18013476666 65279.23143639378 36563.183299985714 1.7950927879722793 2.974871668033512 1.7464267796458124 3.7071174266229394 1.6329467161466495 2.005228142579948 2.4778385577672393 1.4207510245637436 1.7853815107072277 1.0 15.158104060754445 -7.6299315958592135 0.6207987714636206 1.015242372658046 2.456632008396175 0.3279707435360243 0.6181450074027807 0.8120290073289389 0.7145453158913648 0.5818593829410924 0.27826592203557865 2.3445980753352497e-08 7.6299315958592135 1.4413896357381288 RVEIQMPKPAEAPTAPS(ph)PAQTLENSEPAPVSQLQSR ddPTM_KYSE-520_SHP099_60min_R1 1 RVEIQMPKPAEAPTAPSPAQTLENSEPAPVSQLQSR 36 2 Q9UHD8;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;K7EJ51;Q9UHD8-3 Q9UHD8 SEPT9 Septin-9 1 RVEIQMPKPAEAPT(0.006)APS(0.992)PAQT(0.002)LENSEPAPVSQLQSR 204.0 2.6455000000000003e-16 480160000.0 162770.0 227910.0 159630.0 121730.0 160370.0 202260.0 145720.0 171670.0 220570.0 180910.0 True False 153740.82362604953 216960.86150011557 169920.00521703062 133299.18260054084 172990.20661951808 200997.62031546232 160450.79969015045 171074.51683807903 180520.04811721577 179307.27814585002 0.8574154112193676 1.2099947294032192 0.9476470055990492 0.7434120018938337 0.9647695754926714 1.1209674386556088 0.8948370715863437 0.9540857382204285 1.0067636405164728 1.0 17.45207452333367 -6.0070938747573575 24.921921359482383 0.9924789719250859 0.9463269483194942 0.043813497631777776 0.12098762872470234 1561.818913814013 5486946.516638995 0.04039302600688576 0.04403046813779964 9.837984302037729e-07 6.0070938747573575 -0.046152023605591785 RVELLK ddPTM_KYSE-520_SHP099_60min_R1 2 RVELLK 6 1 A0A3B3ITP6;A0A3B3IS57;A0A3B3IT92;P33991;A0A3B3IU45;E5RG31;A0A3B3IRR8 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 0 ; 88.029 0.039368 875020000.0 1163080.0 1001640.0 717340.0 665600.0 1073620.0 1033760.0 764580.0 919110.0 898900.0 871740.0 False True 1098561.6338575024 953519.7109077071 763580.8841845804 728858.4238800635 1158107.7859378122 1027307.9203861974 841871.2079817137 915921.8219318864 735682.4194249682 864017.0618034581 1.271458264451955 1.1035889834367745 0.8837567195614889 0.8435694803974371 1.340376061001041 1.188990317207282 0.9743687308957539 1.0600737675481635 0.8514674674240602 1.0 19.720700276103564 -7.337679906882814 1.9525504251412626 0.9409021911434418 1.088769512944602 0.136853028636564 0.15364819244722466 0.8408186730609509 5.885340233983797 0.127440835794773 0.048107255924569346 4.5953658564913946e-08 7.337679906882814 0.14786732180116025 RVES(ph)EES(ph)GDEEGK ddPTM_KYSE-520_SHP099_60min_R1 2 RVESEESGDEEGK 13 1 H7C118;C9JRC4;B5MBZ8;C9JD73;Q15435-3;Q15435 H7C118 PPP1R7 Protein phosphatase 1 regulatory subunit 7 2 RVES(1)EES(1)GDEEGK;RVES(1)EES(1)GDEEGK 158.98 2.064e-05 604500000.0 1869490.0 1655870.0 1367510.0 1536340.0 1573690.0 1559250.0 1580200.0 1763400.0 1883080.0 1558970.0 True False 1765785.6629640812 1576319.519688457 1455661.8826933627 1682353.2916825362 1697530.4499287247 1549518.1423755782 1739942.037265823 1757283.1769806542 1541160.1405837927 1545158.7386603083 1.142785927933244 1.0201667183108747 0.9420791833695082 1.0887899408582313 1.098612335066963 1.002821330654383 1.1260603805498952 1.1372832661220706 0.9974121765120505 1.0 20.55932362733351 RVES(ph)EES(ph)GDEEGKK ddPTM_KYSE-520_SHP099_60min_R1 14 RVESEESGDEEGKK 14 2 H7C118;C9JRC4;B5MBZ8;C9JD73;Q15435-3;Q15435 H7C118 PPP1R7 Protein phosphatase 1 regulatory subunit 7 2 RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK;RVES(1)EES(1)GDEEGKK 160.27 3.3302e-08 30698510000.0 30827780.0 26406030.0 23002550.0 26679380.0 26467060.0 25818630.0 26932580.0 28876220.0 30643260.0 25405350.0 True False 29117701.589744132 25137444.68254091 24485331.17838127 29214980.25375194 28549867.045028288 25657486.35323551 29655188.023050714 28776055.132580437 25079216.437722106 25180278.36406321 1.156369328756124 0.9982989194597851 0.9724011317256225 1.1602326166277406 1.1338185635697375 1.0189516566208163 1.1777148605860532 1.1428013112694198 0.9959864650866871 1.0 24.585790896126042 -3.828298870213394 7.932949873906682 1.0752868772884552 3.02293031965437 0.10283733975869502 0.07572007857103043 17529.560155877858 21388.96514650721 0.01935493110007089 581888.7059555026 0.00014849134116432083 3.828298870213394 1.947643442365915 RVES(ph)EESGDEEGKK ddPTM_KYSE-520_SHP099_60min_R1 1 RVESEESGDEEGKK 14 2 H7C118;C9JRC4;B5MBZ8;C9JD73;Q15435-3;Q15435 H7C118 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 RVES(0.957)EES(0.043)GDEEGKK 102.89 0.00075053 1321100000.0 354400.0 330330.0 212500.0 378010.0 269450.0 290510.0 323950.0 346850.0 335780.0 336860.0 True False 334740.72552111483 314460.45096456126 226198.0900120215 413935.9567471498 290654.18203921645 288696.81933078694 356698.0274473252 345646.85830539855 274810.8163249704 333875.6824731146 1.0025909136047064 0.9418489200389227 0.6774919584933717 1.2397906720279999 0.8705461262894504 0.864683576810163 1.0683558167673632 1.0352561640461246 0.8230932372473686 1.0 18.348951494303776 -5.239761986383214 24.999261961348104 0.9810008206093958 0.8807645034475143 0.12133094250859544 0.13728262548749437 2017.849881570225 2327064.9848166225 0.03686401141965686 0.06378112526520315 5.757553916756817e-06 5.239761986383214 -0.10023631716188142 RVESEES(ph)GDEEGK ddPTM_KYSE-520_SHP099_60min_R1 2 RVESEESGDEEGK 13 1 H7C118;C9JRC4;B5MBZ8;C9JD73;Q15435-3;Q15435 H7C118 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 RVES(0.198)EES(0.802)GDEEGK;RVES(0.065)EES(0.935)GDEEGK 74.789 0.019875999999999998 68650000.0 53158.0 55530.0 114256.0 43638.0 46582.0 66185.0 41274.0 45217.0 49952.0 55991.0 True False 50209.21977215417 52862.255447770716 121621.12457606355 47785.342399756875 50247.73838467543 65771.91486492085 45446.37871542184 45060.15278072714 40881.975987446924 55494.96330033885 0.9047527340530306 0.9525595171886155 2.1915705019543807 0.8610753040981847 0.9054468260972545 1.185187104439787 0.8189279893648356 0.8119683319162048 0.7366790345674 1.0 15.760069218555214 RVESEES(ph)GDEEGKK ddPTM_KYSE-520_SHP099_60min_R1 9 RVESEESGDEEGKK 14 2 H7C118;C9JRC4;B5MBZ8;C9JD73;Q15435-3;Q15435 H7C118 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 RVES(0.057)EES(0.943)GDEEGKK;RVES(0.113)EES(0.887)GDEEGKK;RVESEES(1)GDEEGKK;RVESEES(1)GDEEGKK;RVES(0.001)EES(0.999)GDEEGKK;RVESEES(1)GDEEGKK;RVESEES(1)GDEEGKK;RVESEES(1)GDEEGKK;RVESEES(1)GDEEGKK 221.79 3.7387e-14 9880780000.0 7125480.0 6128870.0 5543880.0 6390260.0 6210860.0 6082550.0 6079260.0 6926830.0 7639490.0 5967630.0 True False 6730215.420107772 5834429.8855785765 5901247.375321631 6997588.389098277 6699619.347040604 6044586.5492426455 6693810.928660064 6902802.443464278 6252351.191871022 5914761.440945881 1.1378676024897267 0.9864184623218788 0.9977151968411275 1.1830719563187035 1.1326947695069185 1.0219493397312744 1.1317127487714191 1.1670466361802059 1.0570758016693829 1.0 22.495888551092133 -5.239035179798612 24.99216396534505 1.1055857284553572 1.0352422277833846 0.12841573586602506 0.06783781887374181 1391.0729989221027 1551756.784876723 0.01808681528429023 0.03129963416026383 5.767197446171245e-06 5.239035179798612 -0.07034350067197259 RVFITDDFHDMMPK ddPTM_KYSE-520_SHP099_60min_R1 2 RVFITDDFHDMMPK 14 1 P14625 P14625 HSP90B1 Endoplasmin 0 ; 113.63 0.00030029 827360000.0 2937300.0 2588400.0 1780190.0 1523590.0 2697500.0 2203000.0 1481370.0 1574070.0 2123900.0 1626710.0 False True 2774362.11363762 2464049.3787323902 1894943.8958047093 1668391.5355159626 2909777.9033244993 2189250.2598386416 1631121.3363779727 1568609.9185606982 1738253.299161967 1612298.6149612288 1.7207495484354403 1.5282835052188168 1.1753057890273493 1.0347906523234733 1.804738822153284 1.357844160829529 1.0116744635528925 0.9729028506288326 1.0781211886135416 1.0 20.620687540501404 -1.0000000000071851 0.17300796999968365 0.9028286268030989 3.9398745422588113 0.4234845877907478 0.22683857229372967 65.11819994467241 0.7127598609057009 0.6230846578663839 51.448047906125396 0.09999999999834557 1.0000000000071851 3.037045915455712 RVFNPYTEFK ddPTM_KYSE-520_SHP099_60min_R1 2 RVFNPYTEFK 10 1 Q96C19 Q96C19 EFHD2 EF-hand domain-containing protein D2 0 ; 152.07 0.00034154 1719460000.0 3003600.0 2897400.0 1985560.0 1836480.0 3016200.0 2832100.0 2033880.0 2140500.0 2408900.0 2200500.0 False True 2836984.320471842 2758204.5549139343 2113552.374608327 2011018.5070421526 3253557.780169551 2814423.813385843 2239484.4391559367 2133075.1050964547 1971504.4834273078 2181005.281963096 1.300769119604473 1.2646482691831487 0.9690725612117476 0.92206035614552 1.4917697848219165 1.2904250331996512 1.026812936986656 0.9780238144019991 0.9039430118448777 1.0 21.056561833228898 -6.920413751374196 5.30356684274153 0.9639452472420431 1.1976953177998229 0.34526558935164586 0.1561616862421771 0.2720681741479318 13.206111944995286 0.0737644933645183 0.048938288364394886 1.2011195854341517e-07 6.920413751374196 0.23375007055777974 RVGDPPQPLPEEPMEVQGAERAS(ph)PEPQR ddPTM_KYSE-520_SHP099_60min_R1 8 RVGDPPQPLPEEPMEVQGAERASPEPQR 28 2 P46379-3;P46379;P46379-2;A0A0G2JK23;A0A024RCR6;P46379-5;A0A0G2JL47;H0Y710 P46379-3 BAG6;BAT3 Large proline-rich protein BAG6 1 RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR;RVGDPPQPLPEEPMEVQGAERAS(1)PEPQR 160.58 4.3046000000000003e-10 11861560000.0 1438163.0 1341078.0 1454134.0 1070401.0 1178647.0 1248972.0 1004016.0 958135.0 1546476.0 1221726.0 True False 1358385.2314831377 1276650.599880883 1547869.804336664 1172131.5892122055 1271399.813315926 1241176.7024653612 1105511.7355318828 954811.4533153893 1265674.9418874711 1210902.458128446 1.1217957502395683 1.0542968108711717 1.2782778612317214 0.9679818397790981 1.049960551967979 1.0250013897764372 0.9129651427420061 0.7885122760351256 1.0452327793963527 1.0 20.20765122556859 -5.985879124260556 1.0844270192083323 0.9264835139319377 1.1321996098624805 0.3990531994803569 0.09423174902634626 0.4748114020225964 1.1895906844528954 0.044828956346866525 0.053113988756680365 1.0330488908158276e-06 5.985879124260556 0.20571609593054274 RVGEQDSAPTQEKPT(ph)SPGK ddPTM_KYSE-520_SHP099_60min_R1 1 RVGEQDSAPTQEKPTSPGK 19 2 Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-5;Q9BX66-12;Q9BX66-3;Q9BX66-2;Q9BX66-11;Q9BX66;S4R303;Q9BX66-7 Q9BX66-4 SORBS1 Sorbin and SH3 domain-containing protein 1 1 RVGEQDSAPTQEKPT(0.5)S(0.5)PGK 154.66 1.5224e-06 862060000.0 429690.0 364000.0 314880.0 331070.0 375160.0 358100.0 337440.0 366080.0 439340.0 345360.0 True False 405854.2391342212 346512.8936248606 335177.66862581315 362534.79326017486 404682.9576315918 355864.9650695498 371551.7282970381 364810.15392371453 359566.9308601243 342300.3790860141 1.185666928613705 1.012306485169822 0.9791916372420635 1.0591130346632662 1.1822451342652531 1.0396277270266392 1.0854552054225848 1.065760297718058 1.0504426896055858 1.0 18.38490336452108 -8.175581699689923 1.688296116379005 1.000096559838333 1.0733471151822178 0.12275206277069617 0.06210775932258216 1.6096214113990492 8.812757434219206 0.06093693554688214 0.017404793403245678 6.674493282598503e-09 8.175581699689923 0.07325055534388492 RVGEQDSAPTQEKPTS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 3 RVGEQDSAPTQEKPTSPGK 19 2 Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-5;Q9BX66-12;Q9BX66-3;Q9BX66-2;Q9BX66-11;Q9BX66;S4R303;Q9BX66-7 Q9BX66-4 SORBS1 Sorbin and SH3 domain-containing protein 1 1 RVGEQDSAPTQEKPT(0.494)S(0.506)PGK;RVGEQDSAPT(0.001)QEKPT(0.156)S(0.843)PGK;RVGEQDSAPTQEKPT(0.347)S(0.653)PGK 204.04 1.3318e-13 2338430000.0 1155530.0 1053140.0 952320.0 893830.0 1105110.0 1015350.0 924360.0 1068050.0 1313640.0 967270.0 True False 1091430.447408053 1002545.5736046315 1013708.0709658737 978779.334460212 1192075.8697842225 1009012.82402504 1017803.3296842397 1064345.183834744 1075116.0901695585 958700.7403246737 1.1384474857487115 1.0457335969774146 1.057376956465655 1.0209435471268526 1.2434285482876688 1.0524794459669735 1.06164863223069 1.1101954333260373 1.1214303326869859 1.0 19.870721020830697 -4.226970822029147 21.878347888670515 1.083930695921307 1.1384480527220615 0.0654818003390375 0.06495934040631793 9303.474555733095 5904667.339480821 0.0159492557694958 2.099205568104867 5.929651614642637e-05 4.226970822029147 0.054517356800754424 RVGGYATSPS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 RVGGYATSPSSPK 13 1 C9JRL6;O95834-2;O95834-3;K7ESL7 C9JRL6 EML2 Echinoderm microtubule-associated protein-like 2 1 RVGGYATSPS(0.681)S(0.318)PK 69.331 0.015828000000000002 235920000.0 463780.0 384660.0 287430.0 307710.0 374220.0 360370.0 349880.0 392190.0 392500.0 299760.0 True False 438053.19887749106 366180.35621356906 305958.19770426047 336954.6658836153 403668.984979461 358120.7971575358 385249.28489973856 390829.5844278339 321231.8941198131 297104.35960975086 1.4744085191239795 1.2324974183971926 1.029800431424632 1.1341289852703884 1.3586774206534151 1.2053703877921231 1.2966800130626384 1.315462300658233 1.0812089547987582 1.0 18.18061024938874 -7.927543009563198 4.82706570586585 1.001682260320836 1.2459989393164481 0.36313424252246795 0.11565115505270705 0.21410886218409478 8.648711672347286 0.11664184745731981 0.03047517448835911 1.1815632927812956e-08 7.927543009563198 0.24431667899561216 RVGMADANS(ph)PPKPLSK ddPTM_KYSE-520_SHP099_60min_R1 2 RVGMADANSPPKPLSK 16 2 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 RVGMADANS(1)PPKPLSK;RVGMADANS(1)PPKPLSK 127.01 6.3667e-05 1725880000.0 1330540.0 1236580.0 1006310.0 1022970.0 1162660.0 1107310.0 1060820.0 1230460.0 1257970.0 1159810.0 True False 1256732.2938342683 1177172.8406555785 1071178.352752929 1120192.7612328546 1254154.7273695152 1100398.86755421 1168058.0382054993 1226191.8214515243 1029554.3588430607 1149534.9857185266 1.0932527582435754 1.0240426392240483 0.9318362347044009 0.974474700770128 1.0910104894159398 0.9572556566135273 1.016113517828598 1.0666850828251067 0.8956268157419576 1.0 20.132618943996654 -7.761031018096161 24.999999918489426 0.9478134263965061 1.0152915465173853 0.2011914296227455 0.05654708316924483 18.202905639076484 1115012.3317464883 0.04408449952033277 0.014303460947538104 1.7336801707636835e-08 7.761031018096161 0.06747812012087917 RVGMADANS(ph)PPKPLSKPR ddPTM_KYSE-520_SHP099_60min_R1 4 RVGMADANSPPKPLSKPR 18 3 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 RVGMADANS(0.998)PPKPLS(0.002)KPR;RVGMADANS(0.998)PPKPLS(0.002)KPR;RVGMADANS(1)PPKPLSKPR;RVGMADANS(1)PPKPLSKPR 147.41 5.733099999999999e-06 27636500000.0 7406300.0 7326300.0 7015240.0 6647090.0 6181420.0 6426780.0 6198390.0 6353900.0 8098200.0 6335680.0 True False 6995457.774906978 6974333.550999504 7467453.595180863 7278827.435079526 6667862.586531294 6386668.082126999 6824983.751656826 6331859.803911411 6627771.019009111 6279550.80428446 1.1140060798829852 1.1106421093433947 1.1891700263155625 1.1591318649915647 1.0618375094571881 1.0170581115084625 1.0868585929745522 1.0083300543712874 1.0554530452221305 1.0 22.582229931688012 -5.861080293321426 4.598328372000554 1.0377147882147086 1.144019565790359 0.7321904736203878 0.031372991579212195 0.11495226099135261 4.187858053361125 0.0100150032587832 0.011543241719689033 1.3769548709066582e-06 5.861080293321426 0.10630477757565027 RVHNNS(ph)PDTSR ddPTM_KYSE-520_SHP099_60min_R1 8 RVHNNSPDTSR 11 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 RVHNNS(1)PDTSR;RVHNNS(1)PDTSR;RVHNNS(1)PDTSR;RVHNNS(1)PDTSR;RVHNNS(1)PDTSR;RVHNNS(0.999)PDT(0.001)SR;RVHNNS(1)PDTSR;RVHNNS(1)PDTSR 173.44 6.3883e-06 8155190000.0 3679391.0 3771987.0 3283543.0 3470056.0 3688163.0 3730734.0 3099323.0 3351957.0 4149485.0 3363998.0 True False 3475287.846545885 3590775.0826520887 3495205.4356345553 3799849.0789296217 3978400.445323079 3707449.1052604895 3412632.8153175684 3340329.8435196457 3396043.124004468 3334195.594870843 1.04231672907615 1.0769539400075852 1.0482904605270913 1.1396599182048937 1.193211475488495 1.1119470948146655 1.0235250807023406 1.0018397986783496 1.0185494603942156 1.0 21.668907309363295 -6.814343076481806 5.177798162787394 1.009261615688885 1.104397345807477 0.5368768740449693 0.0415297229622219 0.17947619337210718 10.145768272919607 0.020060915141471482 0.013605717118559445 1.5334051711878016e-07 6.814343076481806 0.095135730118592 RVHNNS(ph)PDTSRR ddPTM_KYSE-520_SHP099_60min_R1 2 RVHNNSPDTSRR 12 2 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 RVHNNS(1)PDTSRR;RVHNNS(1)PDTSRR 160.78 2.3146000000000003e-06 416150000.0 175786.0 207041.0 204063.0 136809.0 138630.0 121923.0 90269.0 99769.0 251724.0 80357.0 True False 166034.80015929684 197094.4395851234 217217.22749234433 149811.28622687425 149539.39230319782 121162.03333195952 99394.27146054212 99422.92462525965 206017.2670456459 79645.09949679997 2.0846831909095407 2.474658715104529 2.7273144093576254 1.8809856120889579 1.8775717934686753 1.5212741787939839 1.247964684437812 1.2483244449867794 2.586691062567175 1.0 16.281297976087682 -5.659895803499131 1.8691678194858783 1.5374845719215795 2.424233204218136 0.4312382585531206 0.43403213432774634 0.3216925536143131 2.3054792638877792 0.1457701458344619 0.20740143246048004 2.1882865775548182e-06 5.659895803499131 0.8867486322965563 RVIGQDHDFS(ph)ES(ph)S(ph)EEEAPAEASSGALR ddPTM_KYSE-520_SHP099_60min_R1 2 RVIGQDHDFSESSEEEAPAEASSGALR 27 1 P23497;P23497-3;P23497-4;P23497-2;E9PHV6;P23497-7;P23497-6;P23497-5;H7C4B4;H7C1G8 P23497 SP100 Nuclear autoantigen Sp-100 3 RVIGQDHDFS(1)ES(1)S(1)EEEAPAEASSGALR;RVIGQDHDFS(1)ES(1)S(1)EEEAPAEASSGALR 83.99799999999999 0.014549000000000001 1099210000.0 513260.0 557630.0 490360.0 451710.0 450460.0 494370.0 430450.0 446790.0 632420.0 478090.0 True False 484788.4446415563 530840.6177803052 521969.3902037402 494640.3825884368 485908.6392331988 491284.4534527599 473964.0867871618 445240.18977157027 517588.47001083434 473854.49454839114 1.0230744885169567 1.1202608055585184 1.1015393885863742 1.043865550035261 1.0254384939332397 1.0367833567158216 1.000231278251091 0.9396137314175065 1.0922941028640534 1.0 18.854084596387363 -5.621154454475992 1.998343220682861 1.010749211012602 1.085015094480422 0.3168378380042588 0.0427230206278743 0.3597746945722808 2.9287203104079067 0.013931367227131666 0.020144437631299646 2.39246473798185e-06 5.621154454475992 0.07426588346782004 RVIS(ph)DS(ph)ESDIGGS(ph)DVEFKPDTK ddPTM_KYSE-520_SHP099_60min_R1 2 RVISDSESDIGGSDVEFKPDTK 22 2 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1 P52701-2 MSH6 DNA mismatch repair protein Msh6 3 RVIS(0.939)DS(0.73)ES(0.331)DIGGS(1)DVEFKPDTK;RVIS(0.982)DS(0.739)ES(0.279)DIGGS(1)DVEFKPDTK 167.34 8.758499999999999e-10 936160000.0 2525000.0 2388900.0 2085590.0 2230300.0 2322300.0 2359000.0 2191800.0 2035760.0 2745500.0 2130520.0 True False 2384933.216537293 2274133.658187998 2220030.4684619852 2442267.0414358526 2505051.7979204766 2344276.605973383 2413368.533906617 2028698.4237099546 2246986.4084227984 2111645.250319478 1.1294194496809862 1.07694872414954 1.0513273799782938 1.1565707076348897 1.1863033326935377 1.1101659266009332 1.1428854034746083 0.9607193364524774 1.0640927533082767 1.0 21.009936056202143 -7.252993521773084 24.95906544751256 1.0093045324653676 1.1208530348566337 0.5952646606307987 0.042945047380853384 436.90942957189634 1291151.0258008195 0.02174010422376885 0.012298173249637384 5.584785253138506e-08 7.252993521773084 0.11154850239126612 RVKS(ph)PS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 RVKSPSPK 8 2 O15042-2;O15042;E7ET15;O15042-3 O15042-2 U2SURP U2 snRNP-associated SURP motif-containing protein 2 RVKS(1)PS(1)PK;RVKS(1)PS(1)PK;RVKS(1)PS(1)PK;RVKS(1)PS(1)PK 83.045 0.0058793 6060400000.0 10951800.0 8831700.0 10179600.0 8095000.0 7890900.0 9082400.0 8853600.0 5695400.0 10585900.0 10647700.0 True False 10344281.822127962 8407411.875348028 10835793.303935876 8864346.366149494 8511868.936920606 9025713.372654783 9748608.290809195 5675643.986716357 8663767.408822762 10553369.661785258 0.9801875754988075 0.7966566267257799 1.0267614658826272 0.8399541236812849 0.8065546085950994 0.8552446907396543 0.9237436575456862 0.537803959172244 0.8209479707884276 1.0 23.33120038524348 -5.833540109011772 0.9913430879767049 0.7916437568964796 0.9231282103820239 0.08953097291822909 0.12749409137799317 1.1335967444577515 2.403177920902684 0.06061767533521234 0.08698236765794072 1.4671005874378815e-06 5.833540109011772 0.13148445348554427 RVLQALEGLK ddPTM_KYSE-520_SHP099_60min_R1 2 RVLQALEGLK 10 1 P39019;A0A075B6E2 P39019 RPS19 40S ribosomal protein S19 0 ; 152.54 0.00033147 478880000.0 578950.0 613920.0 493920.0 441030.0 685640.0 641580.0 444460.0 488360.0 556080.0 457130.0 False True 546834.4893917885 584426.3616872929 525758.8734999418 482945.3585994957 739595.9672420433 637575.6612379827 489390.35431158537 486665.9931440812 455109.88963603997 453080.18384175806 1.2069265196174965 1.289896099034445 1.1604102149026392 1.0659158705739564 1.6323732390387509 1.4072027071055069 1.0801407162898762 1.0741277383123276 1.0044797937907406 1.0 18.789406868182837 -6.879757944188357 6.280933204885424 1.0391616955675975 1.2919681497957716 0.42771166302711594 0.14460311908283185 0.23886549900326526 12.171037775085551 0.0666745371970619 0.04475165416615394 1.318991679151241e-07 6.879757944188357 0.25280645422817405 RVNDAEPGS(ph)PEAPQGK ddPTM_KYSE-520_SHP099_60min_R1 1 RVNDAEPGSPEAPQGK 16 1 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 RVNDAEPGS(1)PEAPQGK 91.54700000000001 0.0025235 707420000.0 1005500.0 917110.0 961820.0 865560.0 892840.0 939090.0 868010.0 872190.0 1173000.0 986990.0 True False 949722.9105854451 873050.6589898247 1023820.4561664106 947822.5621598961 963101.4284353089 933228.7909722516 955756.9217612366 869164.5764606758 960012.768923671 978246.0364666017 0.9708425847712286 0.8924653169495684 1.0465878909813144 0.9688999769254427 0.9845186103835445 0.9539816735093033 0.9770107786108747 0.8884928167969633 0.9813612661199337 1.0 19.89983783424567 -8.83771434439449 14.096814732525578 0.999999994838805 0.961895288508856 0.06256784064242771 0.04323452649017972 0.0 0.0 0.04108376578043608 0.009964276812404374 1.4530670528705815e-09 8.83771434439449 -0.038104706329949 RVNNGNTAPEDS(ph)SPAKK ddPTM_KYSE-520_SHP099_60min_R1 4 RVNNGNTAPEDSSPAKK 17 2 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 RVNNGNTAPEDS(0.5)S(0.5)PAKK;RVNNGNTAPEDS(0.601)S(0.399)PAKK;RVNNGNTAPEDS(0.5)S(0.5)PAKK;RVNNGNTAPEDS(0.576)S(0.424)PAKK 120.41 7.7073e-05 7162830000.0 5286500.0 4871340.0 4518090.0 4192420.0 4754700.0 4594770.0 4227050.0 4542310.0 5440000.0 4408060.0 True False 4993247.306623519 4637313.514369588 4809333.3105996 4590866.336302968 5128867.83945765 4566092.336086609 4654361.466032468 4526553.786793123 4452233.131240219 4369008.017818789 1.14287895244385 1.0614110790038673 1.1007838143086406 1.0507800209061966 1.173920445680074 1.0451096261357318 1.0653130978587997 1.0360598489020372 1.0190489724628566 1.0 22.058874322681675 -7.169703716979303 1.023118441240006 1.0051206300292659 1.0989814170480097 0.49994910467011267 0.036600261753101146 0.47047304963644426 0.8822230433938577 0.03047525467449066 0.01282953062555488 6.765443679681304e-08 7.169703716979303 0.09386078701874379 RVNNGNTAPEDSS(ph)PAKK ddPTM_KYSE-520_SHP099_60min_R1 4 RVNNGNTAPEDSSPAKK 17 2 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 RVNNGNTAPEDS(0.065)S(0.935)PAKK;RVNNGNTAPEDS(0.103)S(0.897)PAKK;RVNNGNTAPEDS(0.108)S(0.892)PAKK;RVNNGNTAPEDS(0.243)S(0.757)PAKK 181.87 2.0674999999999997e-09 6312650000.0 3309450.0 3229170.0 2942760.0 2674860.0 3037540.0 2971070.0 2604870.0 2559660.0 3340280.0 2683060.0 True False 3125868.211274983 3074035.8261170113 3132455.0181824802 2929077.890174017 3276577.1167615587 2952526.4500675425 2868195.6806813227 2550781.136889135 2733769.353606449 2659290.175789096 1.175452096102088 1.1559610358071764 1.1779290002652612 1.1014510251047975 1.2321247025211508 1.110268626172559 1.0785568670896315 0.9591962397004069 1.028007164654475 1.0 21.342609778761506 -6.873269755414701 2.1061164801226075 0.9958035201923983 1.1641500130800193 0.8014721832032491 0.036713725667006175 0.12826546527032637 1.1534944520897281 0.018276955975367964 0.010785030092681742 1.3388448259949057e-07 6.873269755414701 0.16834649288762105 RVNS(ph)NGKES(ph)PGSSEFFQEAVSHGK ddPTM_KYSE-520_SHP099_60min_R1 2 RVNSNGKESPGSSEFFQEAVSHGK 24 2 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 2 RVNS(0.993)NGKES(0.424)PGS(0.307)S(0.276)EFFQEAVSHGK;RVNS(0.893)NGKES(0.552)PGS(0.47)S(0.086)EFFQEAVSHGK 132.57 1.2910999999999999e-05 3518890000.0 1688630.0 1831470.0 1792330.0 1599380.0 1734110.0 1931660.0 1960440.0 1819920.0 2698180.0 2129980.0 True False 1594958.3276995516 1743483.432107484 1907866.4596293967 1751384.5943288694 1870574.5912637813 1919603.7934271046 2158620.407250609 1813607.12229252 2208258.52758267 2111110.034299363 0.7555069616392059 0.8258609943494076 0.9037266786819007 0.8296036520474975 0.886062100445934 0.909286471211428 1.02250492498228 0.859077496116597 1.0460177308169296 1.0 21.009570345451642 -1.3510987104264853 0.18711479637213502 1.0246633984452782 9.729050210664946e-19 0.6391477505570273 0.05355637660712726 30.87666897879075 0.4002294281732856 0.10994118005729742 8.857009915707746 0.044555496707520376 1.3510987104264853 -1.0246633984452782 RVNS(ph)NGKESPGS(ph)SEFFQEAVSHGK ddPTM_KYSE-520_SHP099_60min_R1 1 RVNSNGKESPGSSEFFQEAVSHGK 24 2 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 2 RVNS(0.998)NGKES(0.124)PGS(0.757)S(0.122)EFFQEAVSHGK 161.62 1.9576e-10 3502700000.0 848370.0 837050.0 816160.0 960370.0 692120.0 736210.0 922380.0 928290.0 1334100.0 919990.0 True False 801309.2249163331 796836.8615623345 868770.979502172 1051643.276054231 746585.9063758862 731615.0403067673 1015623.1719613023 925069.9786545149 1091861.069924187 911839.6043413891 0.8787830898122803 0.8738783200120818 0.9527673237330757 1.153320464528211 0.8187688962195673 0.8023505853698953 1.1138177889244838 1.0145095412067366 1.1974266797863262 1.0 19.798420546225664 -6.7819952268372115 24.99437145072302 1.082647686378035 0.9199245736970884 0.38259947061998334 0.10442249252413169 288.1162798237441 350324.5613023618 0.045621882996911466 0.03079683157231958 1.6519799544024022e-07 6.7819952268372115 -0.16272311268094664 RVPCAY(ph)DK ddPTM_KYSE-520_SHP099_60min_R1 2 RVPCAYDK 8 1 P46109 P46109 CRKL Crk-like protein 1 RVPCAY(1)DK;RVPCAY(1)DK 120.87 0.00072566 3618600000.0 4855700.0 5026400.0 4059000.0 4128500.0 5012600.0 3843700.0 3597700.0 4024000.0 4980400.0 3936400.0 True False 4586344.64140203 4784924.199219782 4320649.634629621 4520871.398721217 5407063.102207371 3819710.042551877 3961390.6261683656 4010041.6832086635 4076084.9056670545 3901526.5584728583 1.175525675057105 1.2264235876668501 1.1074254064083102 1.158744232793531 1.3858839664861367 0.9790296145124779 1.015343755014432 1.027813504050138 1.0447410377907365 1.0 21.895607290073812 -6.297835951272036 24.99871399063026 1.015246279277657 1.2030335065604838 0.6673255462095131 0.06957911460106658 380.9520151612163 261652.79680605367 0.024788887964176585 0.02186242914541532 5.036908350975929e-07 6.297835951272036 0.1877872272828267 RVPDHHPC ddPTM_KYSE-520_SHP099_60min_R1 4 RVPDHHPC 8 1 P78371-2;P78371 P78371-2 CCT2 T-complex protein 1 subunit beta 0 ;;; 100.19 0.0065693 2527450000.0 2976820.0 2137940.0 1837750.0 1885730.0 3110720.0 2385110.0 2109420.0 2519230.0 2144190.0 1683780.0 False True 2811689.86045645 2035230.1532866335 1956214.3055039628 2064949.2122346004 3355515.9664243176 2370223.643778369 2322660.7595552956 2510491.3791227015 1754859.1466312434 1668863.0191610164 1.6847936757984872 1.2195309800260299 1.1721838659277175 1.2373389478500803 2.010659909110592 1.4202625479531243 1.3917623752744916 1.5043124272624813 1.0515297699588668 1.0 20.670434111989156 -7.77238685731536 16.16101891703451 1.0257109815546803 1.4458095896796754 0.34687383706844854 0.23537764438415013 4.015659206520181 5906.794399254521 0.21977509212092605 0.061554298025826605 1.6889358048457807e-08 7.77238685731536 0.4200986081249951 RVPDPS(ph)PVTK ddPTM_KYSE-520_SHP099_60min_R1 4 RVPDPSPVTK 10 1 A0A0J9YWL0;Q9Y4K1;A0A494C1M5 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 RVPDPS(1)PVTK;RVPDPS(1)PVTK;RVPDPS(0.999)PVT(0.001)K;RVPDPS(0.953)PVT(0.047)K 81.904 0.005484 2261890000.0 2713400.0 2313040.0 2126190.0 2014450.0 2255570.0 1986980.0 1877410.0 2014690.0 2618660.0 1963810.0 True False 2562882.292971203 2201918.08645618 2263247.6094242833 2205902.722333522 2433070.5265622404 1974578.5207871946 2067196.9245558977 2007701.510622183 2143177.3550465996 1946412.1712210597 1.3167212632889609 1.1312702001215045 1.1627792113550444 1.1333173697478853 1.2500284176890863 1.0144709070270892 1.0620550750353484 1.0314883662912333 1.1010912214457134 1.0 20.892385816140077 -6.268772988279339 24.988780116484026 1.0450537551078605 1.1894286767335487 0.6446620997529848 0.05804759548511551 386.79356025538505 1317968.8049167194 0.01972792437777485 0.01774388568265855 5.385512171103134e-07 6.268772988279339 0.1443749216256882 RVPGS(ph)S(ph)GHLHK ddPTM_KYSE-520_SHP099_60min_R1 4 RVPGSSGHLHK 11 1 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 2 RVPGS(1)S(1)GHLHK;RVPGS(1)S(1)GHLHK;RVPGS(1)S(1)GHLHK;RVPGS(1)S(1)GHLHK 77.324 0.0097666 2389610000.0 5220170.0 3050360.0 2935860.0 3238650.0 2686350.0 3988910.0 3109730.0 3035600.0 3640170.0 2582700.0 True False 4930596.763949096 2903816.1269162945 3125110.233142086 3546450.3222643724 2897750.461759327 3964013.7330789655 3424091.8564401018 3025070.2121143695 2979206.889218146 2559819.287310195 1.9261503295922364 1.1343832517050703 1.2208323644697148 1.3854299558743104 1.1320136839832249 1.548552178167338 1.3376303059416612 1.1817514725006428 1.1638348472437032 1.0 21.28761053482139 -1.0000000000000002 0.09723526421020247 0.8781832568832423 2.657690705745976 0.3211299749102636 0.2095621307882983 199.76419314645747 1.3851945645074482 2.998643168859343 47.399704596380886 0.09999999999999995 1.0000000000000002 1.7795074488627338 RVPGS(ph)SGHLHK ddPTM_KYSE-520_SHP099_60min_R1 2 RVPGSSGHLHK 11 1 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 RVPGS(0.617)S(0.383)GHLHK;RVPGS(0.597)S(0.403)GHLHK 73.887 0.011475 1153284000.0 1475619.0 1645522.0 1633435.0 3799940.0 1299412.0 1467332.0 1438320.0 1174365.0 1535589.0 1257713.0 True False 1393763.4724964509 1566468.6531411211 1738728.8336884056 4161085.1551063806 1401668.3317570705 1458173.83670883 1583719.4222504601 1170291.4019138517 1256764.7466485358 1246570.6413059079 1.118078210983971 1.2566224498116594 1.3948097091929845 3.3380259547483218 1.1244194956241567 1.1697482584550896 1.270461031066282 0.9388087310381817 1.0081777197415371 1.0 20.249533209854356 -5.9477081766479 24.99998398025226 1.092478790220587 1.7772797321655314 0.2545055522105839 0.5800659035053348 152.9514191304692 73123.03028582702 0.1890542239451013 0.2143673303505117 1.1279551288947509e-06 5.9477081766479 0.6848009419449443 RVPGS(ph)SGR ddPTM_KYSE-520_SHP099_60min_R1 2 RVPGSSGR 8 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 RVPGS(0.663)S(0.337)GR;RVPGS(0.655)S(0.345)GR 85.355 0.0033978000000000003 1905410000.0 271800.0 219717.0 165804.0 166350.0 142997.0 176641.0 165511.0 174693.0 189826.0 189869.0 True False 256722.71218013295 209161.46551805933 176491.99113577962 182159.85398504877 154250.0503583665 175538.51799734784 182242.46711169687 174087.03075665285 155358.38352404494 188186.90837584683 1.3641900724964695 1.1114559844955958 0.937854777779174 0.9679730410429995 0.819664086570243 0.9327881493582028 0.9684120361216747 0.925075140768912 0.8255536204131864 1.0 17.521806741832737 -4.322363499761589 1.5446441769031356 0.9141502240422816 1.505403494077763 0.862284649270614 0.05527577802594847 0.31492460434750214 0.778321221383927 0.015424872569554774 0.27329782013821685 4.7603238608265556e-05 4.322363499761589 0.5912532700354813 RVPGSS(ph)GHLHK ddPTM_KYSE-520_SHP099_60min_R1 4 RVPGSSGHLHK 11 1 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 RVPGS(0.163)S(0.837)GHLHK;RVPGS(0.183)S(0.817)GHLHK;RVPGS(0.047)S(0.953)GHLHK;RVPGS(0.139)S(0.861)GHLHK 124.39 0.00011796 15777940000.0 7648710.0 8135470.0 7559580.0 17599400.0 5500650.0 6686390.0 6831370.0 4843440.0 7179020.0 5100910.0 True False 7224420.808974627 7744629.8096105745 8046882.622555662 19272041.68454743 5933519.860582725 6644657.759819564 7521951.5473462995 4826639.237107394 5875490.936366939 5055719.905847927 1.428959860022739 1.531854998662485 1.5916393258352528 3.811928279938047 1.1736251159245297 1.3142851826371396 1.4878101808301711 0.954688813263655 1.1621472403110755 1.0 22.269485107673532 RVPGSS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 4 RVPGSSGR 8 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 RVPGS(0.096)S(0.904)GR;RVPGS(0.024)S(0.976)GR;RVPGS(0.17)S(0.83)GR;RVPGS(0.215)S(0.785)GR 117.25 0.00064522 6250550000.0 1146730.0 803800.0 622345.0 652649.0 642104.0 816190.0 740984.0 638304.0 761070.0 772770.0 True False 1083118.6009504176 765184.2414716028 662462.3544872066 714676.5647339224 692633.9317279978 811095.8554596924 815889.8940269456 636089.8724052731 622878.8730134177 765923.8590059619 1.4141335176007184 0.999034345874381 0.8649193346019659 0.9330908762412105 0.9043117322744302 1.05897713711694 1.0652362952706957 0.8304870842263733 0.8132386342185605 1.0 19.546841454453403 -4.2707568842633234 3.6989183239190804 0.9354252107408126 1.461188292257777 0.7498089602374738 0.08270216142438211 0.13294373471542906 3.4434840450675894 0.02248300457023707 0.18967785097855172 5.360966775940206e-05 4.2707568842633234 0.5257630815169644 RVPLS(ph)PLSLLAGPADAR ddPTM_KYSE-520_SHP099_60min_R1 4 RVPLSPLSLLAGPADAR 17 1 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 1 RVPLS(0.997)PLS(0.003)LLAGPADAR;RVPLS(0.997)PLS(0.003)LLAGPADAR;RVPLS(0.91)PLS(0.09)LLAGPADAR;RVPLS(0.968)PLS(0.032)LLAGPADAR 82.774 0.00503 692120000.0 254827.0 337344.0 297710.0 221783.0 257117.0 296256.0 233405.0 281010.0 456698.0 314559.0 True False 240691.23832496954 321137.487876333 316900.8629528419 242861.18963850933 277350.64510438754 294406.95641341683 256999.85521328286 280035.24189822725 373773.15561969526 311772.2519831988 0.7720098141958452 1.0300387088124792 1.0164498634404433 0.7789698669258 0.8895937446008947 0.9443013434989148 0.8243192060181559 0.8982045070300809 1.1988660095377495 1.0 18.250133007002272 -7.742518424396618 24.86287696813562 1.0994329453113463 0.8981777492233205 0.43056248929191077 0.09430508449104892 182.38643536103282 239664.84775846344 0.06306742619392151 0.023746270298418196 1.8091791564777846e-08 7.742518424396618 -0.20125519608802578 RVPNAY(ph)DK ddPTM_KYSE-520_SHP099_60min_R1 1 RVPNAYDK 8 1 P46108 P46108 CRK Adapter molecule crk 1 RVPNAY(1)DK 78.264 0.027859 417880000.0 418750.0 414860.0 363550.0 351130.0 453470.0 316230.0 356690.0 380820.0 418790.0 367980.0 True False 395521.1027425701 394929.5028824445 386985.0147005663 384501.2896289159 489155.5091086425 314256.2912704378 392747.7061589331 379499.0243040566 342748.2928367812 364719.9834841075 1.0844514165750525 1.082829350642514 1.06104691879991 1.0542369681963708 1.3411809916084767 0.8616371613872137 1.0768472360825465 1.0405216096983978 0.9397573710180767 1.0 18.47642972342147 -6.297696657503492 24.9999251962931 0.9921037314592214 1.114964164888581 0.35426420667342484 0.09438349262167502 780.3667472559954 538072.0461758771 0.033043543594991225 0.02914250366059414 5.038524126683401e-07 6.297696657503492 0.1228604334293597 RVPPPALS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 13 RVPPPALSR 9 1 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R;RVPPPALS(1)R 116.74 0.00053785 16622440000.0 5744810.0 5440750.0 5141400.0 4628770.0 5111330.0 5107930.0 4855960.0 5161690.0 6259730.0 5096340.0 True False 5426133.937305181 5179368.20326775 5472822.870530862 5068686.909109553 5513562.59151052 5076049.514179566 5346847.826402574 5143785.302137508 5123120.826951898 5051190.392492524 1.074228749201362 1.0253757631004632 1.083471903705115 1.0034638402549692 1.0915372740067786 1.0049214382661142 1.0585322292245167 1.0183313045935876 1.014240293647668 1.0 22.26819199104341 -7.465125009911442 0.5760574661184361 0.99821548783634 1.0534901913423615 0.2772479419859126 0.028837751751510852 1.010330077592918 0.7571246898019665 0.02633040548796778 0.01422545378605451 3.426691364230683e-08 7.465125009911442 0.055274703506021594 RVPS(ph)INQK ddPTM_KYSE-520_SHP099_60min_R1 2 RVPSINQK 8 1 A0A2R8YFT6;Q92834-4;Q92834-2;Q92834 A0A2R8YFT6 RPGR X-linked retinitis pigmentosa GTPase regulator 1 RVPS(1)INQK;RVPS(1)INQK 154.05 0.0016958 270350000.0 526220.0 528740.0 499480.0 504320.0 516530.0 500180.0 481540.0 534380.0 661890.0 608710.0 True False 497029.52760643646 503338.5367450793 531677.2799962568 552250.4211706632 557177.9723463226 497058.19108764984 530218.762577512 532526.3605052301 541707.4608890783 603317.3029692139 0.8238277356878638 0.8342849347564024 0.8812564754559795 0.9153565105008159 0.923523939400018 0.8238752454825811 0.8788389790381463 0.8826638286096096 0.8978815263926229 1.0 19.202557433479353 -13.999999999991074 0.18630181786131828 1.5296796090197273 0.8502885836731547 0.6080974961352349 0.03185397750248892 104.36166987405741 1.0150661157156675 20.481870125711986 0.100916949068335 1.0000000000205533e-14 13.999999999991074 -0.6793910253465726 RVPS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 4 RVPSPGK 7 1 D6RIF6;H0Y9L2 D6RIF6 SLAIN2 1 RVPS(1)PGK;RVPS(1)PGK;RVPS(1)PGK;RVPS(1)PGK 81.33800000000001 0.0087361 5282900000.0 3057050.0 2826600.0 2622620.0 2664160.0 2712720.0 2392990.0 2465570.0 2378040.0 2717630.0 2498680.0 True False 2887469.3424219117 2690805.893186901 2791678.281540363 2917360.9653910887 2926195.6307345508 2378054.461775433 2714813.8772443356 2369791.134278707 2224176.8978772676 2476543.639143625 1.165927099681709 1.0865166479026258 1.12724776475399 1.1779969951992835 1.1815643320326925 0.9602311964903437 1.096210797312299 0.9568945593456887 0.8980971959155041 1.0 21.23989661223125 -6.676405349733956 1.1705101072878865 0.9527755270028241 1.1431568082487975 0.6374312428592113 0.05918073704856347 0.3165792107346967 0.8771520972406306 0.03844176105990816 0.023684968869992 2.1066609752711556e-07 6.676405349733956 0.19038128124597342 RVPS(ph)PTPAPK ddPTM_KYSE-520_SHP099_60min_R1 13 RVPSPTPAPK 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RVPS(0.777)PT(0.223)PAPK;RVPS(0.999)PT(0.001)PAPK;RVPS(0.974)PT(0.026)PAPK;RVPS(0.999)PT(0.001)PAPK;RVPS(0.755)PT(0.245)PAPK;RVPS(0.825)PT(0.175)PAPK;RVPS(0.925)PT(0.075)PAPK;RVPS(0.75)PT(0.25)PAPK;RVPS(0.689)PT(0.311)PAPK;RVPS(0.963)PT(0.037)PAPK;RVPS(0.962)PT(0.038)PAPK;RVPS(0.997)PT(0.003)PAPK;RVPS(0.893)PT(0.107)PAPK 159.5 5.1812e-05 240773720000.0 149692300.0 142299700.0 121454500.0 101297800.0 105854600.0 135215700.0 112427400.0 129240800.0 151099500.0 130163600.0 True False 141388569.71479812 135463408.81579572 129283651.40407103 110925112.45570588 114184754.78971407 134371768.66058284 123792658.77768603 128792493.82982935 123663639.70842485 129010451.76974845 1.0959466289377975 1.0500188702351356 1.002117655047129 0.8598149292096086 0.8850814273056375 1.041557229025157 0.9595552692011738 0.9983105404490165 0.9585552024043267 1.0 26.942912709286713 -4.782708961613443 2.914978296851128 0.956910164399193 1.0823962743037003 0.44427193473754467 0.051341413973770254 0.2445410140421332 4.162033809066701 0.014832205062207752 0.04293306348590497 1.649267262310555e-05 4.782708961613443 0.12548610990450737 RVPSPT(ph)PAPK ddPTM_KYSE-520_SHP099_60min_R1 1 RVPSPTPAPK 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 RVPS(0.207)PT(0.793)PAPK 140.01 0.0002891 15966000000.0 7635800.0 7307900.0 6412000.0 5007300.0 5573500.0 6593700.0 5705300.0 6466500.0 7907300.0 6201000.0 True False 7212226.952410077 6956817.514618471 6825327.779562742 5483192.286500365 6012102.741122926 6552546.272491166 6282047.4023621725 6444069.220792443 6471533.646811722 6146063.964305005 1.17347085782008 1.1319142714788109 1.1105201343823874 0.8921469607777507 0.9782037375529937 1.066137012329667 1.022125288452403 1.0484871713373285 1.0529557916085763 1.0 22.551231350980956 -5.020397069498283 22.577934353457188 1.0114533640640784 1.1448238489169507 0.6171687395112628 0.04759851797087551 148.5792564582657 164467.15426064486 0.013855271946034396 0.024467835823775104 9.541198484029723e-06 5.020397069498283 0.13337048485287228 RVPTTLSIKPLGAIS(ph)PVLNR ddPTM_KYSE-520_SHP099_60min_R1 1 RVPTTLSIKPLGAISPVLNR 20 2 Q8NEN9 Q8NEN9 PDZD8 PDZ domain-containing protein 8 1 RVPTTLSIKPLGAIS(1)PVLNR 63.54600000000001 0.022152 126090000.0 324990.0 381370.0 359590.0 377590.0 385060.0 418370.0 314340.0 375360.0 465690.0 219970.0 True False 306962.1568484966 363048.4127519591 382769.7467643425 413476.04007342714 415362.0313082979 415758.79764352867 346116.55486276356 374057.9637696826 381132.43508956884 218021.23693407033 1.4079461302263963 1.665197472766128 1.7556534957192822 1.8964943318731027 1.9051448251066636 1.9069646768826205 1.5875359654409689 1.7156950810383569 1.748143623296768 1.0 17.734109145802364 -10.617754551001568 8.990950703938866 0.9997288848724543 1.741147431055233 0.6866160263325494 0.14826272087371295 0.0008628684551978899 3.66843229554131e-05 0.15373328835051864 0.03727334087778628 2.4112678131529992e-11 10.617754551001568 0.7414185461827788 RVQT(ph)PLLR ddPTM_KYSE-520_SHP099_60min_R1 3 RVQTPLLR 8 1 Q9UHD8;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 RVQT(1)PLLR;RVQT(1)PLLR;RVQT(1)PLLR 87.713 0.0056676 10404900000.0 5701590.0 6461900.0 6343300.0 5176390.0 5041690.0 5345730.0 4336500.0 4887450.0 6265800.0 5202490.0 True False 5385311.436862119 6151460.624490356 6752199.267638855 5668352.549261596 5438442.319707917 5312365.316172139 4774875.740161528 4870496.57668941 5128088.667964148 5156399.986075978 1.0443936566993017 1.1929758438254165 1.3094793433155059 1.0992848818105778 1.0546975281967166 1.030246941765053 0.9260095712231995 0.9445536788925212 0.9945094798331627 1.0 22.297932748374055 -5.922925982709918 1.6340191564012538 0.9685230333648451 1.181994368938379 0.6301774418581245 0.06711278839975911 0.23771073642809484 1.3033675233243553 0.026732154363559756 0.03149389375674801 1.1941916145225008e-06 5.922925982709918 0.21347133557353382 RVS(ph)ADSQPFQHGDK ddPTM_KYSE-520_SHP099_60min_R1 3 RVSADSQPFQHGDK 14 1 D6RED3;D6RAZ0;F2Z2L2;H0YAM8;E9PD12;Q96AX9-8;Q96AX9-7;Q96AX9-10;Q96AX9-4;Q96AX9-9;Q96AX9-6;Q96AX9-5;Q96AX9-2;Q96AX9-12;Q96AX9-3;Q96AX9;Q96AX9-11;Q96AX9-13;Q96AX9-14 D6RED3 MIB2 E3 ubiquitin-protein ligase MIB2 1 RVS(0.945)ADS(0.055)QPFQHGDK;RVS(0.991)ADS(0.009)QPFQHGDK;RVS(0.661)ADS(0.339)QPFQHGDK 109.65 0.00011521 1708780000.0 1311540.0 1158360.0 1067030.0 1212590.0 1197180.0 1176700.0 1148280.0 1226860.0 1301220.0 1069960.0 True False 1238786.2617098303 1102710.6468661935 1135812.4611083646 1327834.1890215238 1291391.2549775825 1169355.7788252977 1264359.3485328439 1222604.309011276 1064951.249086838 1060480.986816284 1.1681362297959195 1.0398212326056773 1.0710351955655861 1.2521056063512015 1.2177410731846539 1.1026654823259694 1.1922508411288277 1.1528771606567974 1.0042153158105873 1.0 20.016287324589857 -7.762973219214102 23.685662013518773 1.0021074682010993 1.148850614128182 0.47952248383150153 0.061452269031871905 19.472485446591335 300597.27552783187 0.05383138874140316 0.016773376896063313 1.7259443191314483e-08 7.762973219214102 0.1467431459270827 RVS(ph)EVEAVLSQK ddPTM_KYSE-520_SHP099_60min_R1 12 RVSEVEAVLSQK 12 1 O14578-4;H7BYJ3;O14578;O14578-3 O14578-4 CIT Citron Rho-interacting kinase 1 RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK;RVS(1)EVEAVLSQK 231.41 3.3989999999999996e-12 6477239000.0 9710190.0 9336240.0 9316240.0 7896910.0 8377600.0 8910710.0 8120810.0 8409630.0 10584030.0 8758450.0 True False 9171546.403916124 8887713.016418062 9916779.736911032 8647429.952107443 9036869.457976397 8855094.953629961 8941740.726267995 8380458.956352388 8662236.953683902 8680856.946970982 1.0565254628595577 1.023828991850771 1.1423733621565209 0.9961493438876212 1.041011217346421 1.0200715214780467 1.0300527679341662 0.9653953529641549 0.9978550512465733 1.0 23.049406037353474 -6.31625767101891 0.7843764540828547 0.9884400877898675 1.0636920785290835 0.3645707981582478 0.036329492410301346 0.7073461679917495 0.9404658926391942 0.025162544992363242 0.02293668419851553 4.827722836944727e-07 6.31625767101891 0.07525199073921607 RVS(ph)EVEEEKEPVPQPLPSDDTR ddPTM_KYSE-520_SHP099_60min_R1 6 RVSEVEEEKEPVPQPLPSDDTR 22 2 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 RVS(0.953)EVEEEKEPVPQPLPS(0.038)DDT(0.008)R;RVS(0.947)EVEEEKEPVPQPLPS(0.053)DDTR;RVS(0.994)EVEEEKEPVPQPLPS(0.006)DDTR;RVS(1)EVEEEKEPVPQPLPSDDTR;RVS(1)EVEEEKEPVPQPLPSDDTR;RVS(1)EVEEEKEPVPQPLPSDDTR 215.53 1.4726999999999999e-19 50800700000.0 15583610.0 14918850.0 13863010.0 16693290.0 16941670.0 17293790.0 19815100.0 23151300.0 27101000.0 20967100.0 True False 14719156.088143652 14202126.052349603 14756641.806200236 18279815.26257935 18274883.044083633 17185853.041804306 21818203.68473994 23070993.54385404 22180141.560614187 20781347.806156985 0.7082868842502478 0.6834073605246082 0.710090699787442 0.8796260681977282 0.8793887294773657 0.8269845248782456 1.0498935818915345 1.1101779229650681 1.0673100593621159 1.0 24.308785889685687 -6.059766606685678 0.6713444421368984 1.0812094458312922 0.6757856019814154 0.8413281686562977 0.0603868982044908 0.29726736147326827 0.2975455537435281 0.04590664960049122 0.05944796928664866 8.71431778520598e-07 6.059766606685678 -0.40542384384987684 RVS(ph)FADPIYQAGLADDIDRR ddPTM_KYSE-520_SHP099_60min_R1 5 RVSFADPIYQAGLADDIDRR 20 2 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 RVS(1)FADPIYQAGLADDIDRR;RVS(1)FADPIYQAGLADDIDRR;RVS(1)FADPIYQAGLADDIDRR;RVS(1)FADPIYQAGLADDIDRR;RVS(1)FADPIYQAGLADDIDRR 135.13 1.8730000000000001e-06 2007720000.0 1206940.0 1137790.0 1153847.0 977130.0 1031449.0 1111238.0 1063898.0 1100581.0 1423270.0 1164139.0 True False 1139988.6322247596 1083128.8605423917 1228225.823840474 1069996.141415153 1112618.16815798 1104302.3514491932 1171447.1924838866 1096763.3413885375 1164840.0457169611 1153825.634146436 0.9880077184002655 0.9387283732378303 1.0644813111203557 0.9273464809149458 0.9642862276855725 0.9570790583675336 1.0152722888242005 0.9505451334506784 1.0095459931245794 1.0 20.13799379005031 -6.739154596342626 24.999235085716325 0.9897196475443416 0.9733922757380262 0.05961416512928974 0.038559069045727305 932.7211001711819 1046334.5469989983 0.014372860518872536 0.011124290375093366 1.8232465634601e-07 6.739154596342626 -0.016327371806315383 RVS(ph)FADTIK ddPTM_KYSE-520_SHP099_60min_R1 3 RVSFADTIK 9 1 E9PPJ1;Q8NG31-3;Q8NG31-4;Q8NG31-2;Q8NG31 E9PPJ1 CASC5 Protein CASC5 1 RVS(0.999)FADT(0.001)IK;RVS(1)FADTIK;RVS(1)FADTIK 163.09 8.2821e-05 1781010000.0 2732299.0 2398199.0 2137185.0 1683152.0 1692512.0 2245896.0 2089848.0 2224521.0 2632456.0 2602772.0 True False 2580732.9277669783 2282985.9202699144 2274951.3647169047 1843118.2600218991 1825703.065324024 2231878.5299911792 2301110.230790979 2216804.6558581027 2154468.349215457 2579713.465005974 1.0003951844942602 0.8849765492326209 0.8818620345153863 0.7144662711669146 0.7077154459554663 0.8651652829923927 0.8920022560667026 0.8593220471688973 0.8351580043446678 1.0 21.29877940025496 -9.28522557463889 13.8111329407092 0.999999998160826 0.8449617386738325 0.2361034133225849 0.08118578079204354 0.0 0.0 0.08558814311351412 0.02075817378573527 5.185306416672243e-10 9.28522557463889 -0.15503825948699346 RVS(ph)GDAAQDLDR ddPTM_KYSE-520_SHP099_60min_R1 7 RVSGDAAQDLDR 12 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 RVS(1)GDAAQDLDR;RVS(1)GDAAQDLDR;RVS(1)GDAAQDLDR;RVS(1)GDAAQDLDR;RVS(1)GDAAQDLDR;RVS(1)GDAAQDLDR;RVS(1)GDAAQDLDR 187.56 6.3157e-08 11428700000.0 8153670.0 7669250.0 7561850.0 6691810.0 7312120.0 7562740.0 6906830.0 7308760.0 8713640.0 7348060.0 True False 7701369.671161821 7300807.718221051 8049298.950387778 7327797.610433966 7887542.243728327 7515538.134404036 7605039.780564931 7283407.617437406 7131462.628988967 7282961.905104182 1.05745022032374 1.0024503510178135 1.1052232670263615 1.0061562460320383 1.0830129755588083 1.0319342916151815 1.044223473863707 1.0000611993223405 0.9791981232238716 1.0 22.796093868205507 -7.301336470034556 3.064196827904922 0.989028991454054 1.0475128649229954 0.4114470705307369 0.02983472783154363 0.24904277754204107 4.670226211849558 0.017319415711384966 0.007667843689142188 4.996472828094206e-08 7.301336470034556 0.05848387346894146 RVS(ph)GPDPK ddPTM_KYSE-520_SHP099_60min_R1 2 RVSGPDPK 8 1 P22314;Q5JRS2;Q5JRR9;Q5JRS0;Q5JRS1;Q5JRS3 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 RVS(1)GPDPK;RVS(1)GPDPK 69.21600000000001 0.045918 755360000.0 3151520.0 2741490.0 2533870.0 3074070.0 3322040.0 3457530.0 3623960.0 4060000.0 3660970.0 3656640.0 True False 2976698.9032006324 2609784.7053396134 2697207.314535342 3366228.68854715 3583465.648177987 3435950.2727643643 3990305.243241269 4045916.8076111223 2996230.133543475 3624245.0144228726 0.821329377940703 0.7200905829914475 0.7442121886907934 0.9288082552782903 0.9887481762180531 0.9480458023921728 1.1010031682079 1.116347485203176 0.8267184259396979 1.0 21.789249060344122 -5.420369006654207 2.6859995813147153 1.0053008885878325 0.7557247521189531 0.6331354365653931 0.07957558435532858 0.17342735085615718 2.431142669940914 0.02435176627633134 0.03856511217057984 3.7986649828996896e-06 5.420369006654207 -0.24957613646887944 RVS(ph)GPDPKPGS(ph)NCSPAQSVLSEVPSVPTNGMAK ddPTM_KYSE-520_SHP099_60min_R1 3 RVSGPDPKPGSNCSPAQSVLSEVPSVPTNGMAK 33 2 P22314;Q5JRS2;Q5JRR9;Q5JRS0;Q5JRS1;Q5JRS3 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 2 RVS(0.995)GPDPKPGS(0.598)NCS(0.398)PAQS(0.01)VLSEVPSVPTNGMAK;RVS(0.985)GPDPKPGS(0.442)NCS(0.33)PAQS(0.233)VLS(0.011)EVPSVPTNGMAK;RVS(0.997)GPDPKPGS(0.558)NCS(0.425)PAQS(0.017)VLS(0.003)EVPSVPTNGMAK 137.97 1.1816e-06 4235950000.0 1622490.0 1463420.0 1477520.0 1588280.0 1587600.0 1837230.0 1557940.0 1751330.0 2001870.0 1652850.0 True False 1532487.2453463713 1393115.1065617984 1572763.3033155857 1739229.6536662036 1712535.0877916527 1825763.166084134 1715431.7792291606 1745255.0449934944 1638380.871036002 1638207.034897842 0.9354661606870323 0.8503901380503305 0.9600516111894628 1.0616665760897928 1.0453715869303697 1.1144886618057943 1.0471397953288208 1.0653446162879698 1.0001061136562455 1.0 20.64368626412096 -5.073577314653585 3.400596194452675 1.052925839241676 0.8933818374793742 0.7415184880485821 0.03700039089908143 0.10709402971181596 2.3919616665932635 0.009971583635185249 0.01975800240767731 8.441559488769026e-06 5.073577314653585 -0.15954400176230188 RVS(ph)GPDPKPGSNCSPAQSVLSEVPSVPTNGMAK ddPTM_KYSE-520_SHP099_60min_R1 5 RVSGPDPKPGSNCSPAQSVLSEVPSVPTNGMAK 33 2 P22314;Q5JRS2;Q5JRR9;Q5JRS0;Q5JRS1;Q5JRS3 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 1 RVS(0.579)GPDPKPGS(0.095)NCS(0.105)PAQS(0.105)VLS(0.116)EVPS(0.001)VPTNGMAK;RVS(0.937)GPDPKPGS(0.01)NCS(0.01)PAQS(0.043)VLSEVPSVPTNGMAK;RVS(0.785)GPDPKPGS(0.071)NCS(0.071)PAQS(0.071)VLS(0.002)EVPSVPTNGMAK;RVS(0.696)GPDPKPGS(0.101)NCS(0.101)PAQS(0.101)VLS(0.001)EVPSVPTNGMAK;RVS(0.968)GPDPKPGS(0.011)NCS(0.011)PAQS(0.011)VLSEVPSVPTNGMAK 163.43 3.1175999999999997e-10 30876750000.0 4741320.0 4534910.0 4127000.0 3893930.0 4114630.0 5087310.0 4723000.0 5561680.0 6234490.0 4974020.0 True False 4478309.52801291 4317046.116561311 4393033.023433477 4264007.936447253 4438427.971957779 5055558.211248176 5200446.932038019 5542387.830185868 5102463.774703273 4929954.052529008 0.9083876807564951 0.8756767447653427 0.8910900541111337 0.8649183929533517 0.9002980402385125 1.0254777544335802 1.0548672212006218 1.1242270761819146 1.0349921561816118 1.0 22.233142769984674 -6.315675624542978 2.806077958533693 1.0625332731580508 0.8836521334872582 0.869511686867665 0.03106806047457334 0.08642952431408049 1.3468374569872568 0.01150493539447495 0.010295601124736133 4.834197344433178e-07 6.315675624542978 -0.17888113967079255 RVS(ph)HS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 14 RVSHSPPPK 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK;RVS(1)HS(1)PPPK 109.16 0.0026191999999999995 232548380000.0 20017550.0 18630510.0 17817950.0 17640600.0 18021670.0 18606420.0 17645020.0 18176130.0 21702850.0 16955250.0 True False 18907136.597503394 17735472.334634356 18966523.566728 19317157.320160236 19439872.899724193 18490290.431078944 19428750.82040006 18113081.24737065 17762159.524326622 16805039.675984893 1.1250872929816693 1.0553662875297516 1.128621171530583 1.1494859692455988 1.1567882774775347 1.100282462141541 1.1561264474825703 1.0778362679651987 1.056954334342304 1.0 24.002390613003186 -7.847212752000295 1.6448893434864247 1.0027508978317805 1.1231751629393871 0.6415386363116117 0.029698152388071414 0.22868358453659085 1.3073746738042693 0.029355631928896977 0.008676135415521738 1.4216321879265209e-08 7.847212752000295 0.12042426510760662 RVS(ph)HS(ph)PPPKQR ddPTM_KYSE-520_SHP099_60min_R1 4 RVSHSPPPKQR 11 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RVS(1)HS(1)PPPKQR;RVS(1)HS(1)PPPKQR;RVS(1)HS(1)PPPKQR;RVS(1)HS(1)PPPKQR 78.069 0.0076918 5340420000.0 644830.0 879440.0 907620.0 460011.0 468855.0 463738.0 366223.0 317480.0 951330.0 441086.0 True False 609059.9944632645 837190.3823336483 966126.6374433467 503730.3071326492 505751.2210799669 460843.63912712305 403244.39483204804 316378.7359803888 778592.4530777119 437178.32119971473 1.393161474228338 1.9149860405616896 2.209914331506832 1.1522307550619184 1.1568533858039276 1.0541319566406344 0.9223796681533878 0.7236834962725852 1.7809493639599527 1.0 18.737862336853066 -5.3479982528522925 7.084413566554211 1.0890536731767337 1.844911867282486 0.5255447144210333 0.3159631733907199 0.1928284368542475 13.6026703478903 0.08839607319584433 0.13163274999307112 4.48747195219842e-06 5.3479982528522925 0.7558581941057523 RVS(ph)HSPPPK ddPTM_KYSE-520_SHP099_60min_R1 2 RVSHSPPPK 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RVS(0.721)HS(0.279)PPPK;RVS(0.5)HS(0.5)PPPK 48.74100000000001 0.053033000000000004 2039520000.0 1266050.0 1044690.0 980590.0 1144160.0 1159380.0 1135180.0 1052860.0 1012740.0 1352900.0 1015320.0 True False 1195819.6826918975 994501.524288341 1043800.4003994743 1252900.6223957527 1250616.6100301621 1128094.9205463587 1159293.3637233865 1009227.0413152929 1107247.4638336187 1006325.0547070075 1.1883035974296214 0.9882507840152018 1.03723980190812 1.2450257663121942 1.2427561096491635 1.1210045057208722 1.1520068573279396 1.002883746752316 1.100288081524508 1.0 19.940664957038916 -7.253804044129225 24.287757057305654 1.03868943459879 1.136847666070016 0.26236182233138583 0.08038886518490025 625.2619084410685 1988949.1053662181 0.04229867147247318 0.02379226885568717 5.5743721069121316e-08 7.253804044129225 0.09815823147122593 RVS(ph)ISEGDDKIEYR ddPTM_KYSE-520_SHP099_60min_R1 7 RVSISEGDDKIEYR 14 2 M0R2U2;M0R1H0;M0R2B0;M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087 M0R2U2 FBL rRNA 2-O-methyltransferase fibrillarin 1 RVS(0.854)IS(0.146)EGDDKIEYR;RVS(0.993)IS(0.007)EGDDKIEYR;RVS(0.981)IS(0.019)EGDDKIEYR;RVS(0.974)IS(0.026)EGDDKIEYR;RVS(0.932)IS(0.068)EGDDKIEYR;RVS(0.991)IS(0.009)EGDDKIEYR;RVS(0.994)IS(0.006)EGDDKIEYR 203.26 1.8198e-11 10758560000.0 4366600.0 4341480.0 4134420.0 4211950.0 3920020.0 3793650.0 4053330.0 4120720.0 5060440.0 4202250.0 True False 4124375.9933987116 4132908.7841056664 4400931.3285058895 4612252.461631061 4228503.272137207 3769972.4231669866 4463080.153088648 4106426.1841032812 4141591.6593112554 4165021.3343010265 0.9902412646562984 0.9922899434077571 1.0566407649012568 1.1073778719083291 1.015241683713208 0.9051508073006457 1.071562375043066 0.9859316086294241 0.9943746566681866 1.0 21.989892454785696 -6.000503723095696 24.999999738508873 0.9916080443491735 1.0381999855065083 0.16212760360322132 0.048488414083615324 35.963271412567565 1785065.6542425384 0.015705942020485676 0.017609211476294778 9.988408070926163e-07 6.000503723095696 0.04659194115733478 RVS(ph)LEPHQGPGTPESK ddPTM_KYSE-520_SHP099_60min_R1 1 RVSLEPHQGPGTPESK 16 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 RVS(0.977)LEPHQGPGT(0.022)PES(0.001)K 53.625 0.044522000000000006 453900000.0 221470.0 219360.0 224800.0 258450.0 208870.0 255950.0 247720.0 269250.0 357320.0 250420.0 True False 209184.6176105004 208821.61633392746 239290.9676927175 283013.01029417414 225306.8806922663 254352.52111016805 272761.9551142197 268316.0345934224 292439.69530418253 248201.47362381167 0.8428016746087195 0.8413391479312062 0.9640997057712903 1.1402551570790624 0.9077580298082931 1.0247824777047023 1.0989538101116727 1.081041263276694 1.1782351290444828 1.0 17.921152155511262 -4.230463361457812 0.5529323512657935 1.0841861433927626 0.6155517635212403 0.5532260323081675 0.07546441900164913 3.121643714088817 0.7117523876943888 0.04326124391165923 0.9551140088353184 5.882157359063952e-05 4.230463361457812 -0.46863437987152234 RVS(ph)LSEIGFGK ddPTM_KYSE-520_SHP099_60min_R1 4 RVSLSEIGFGK 11 1 E5RJM2;E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;H0YBX5 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 RVS(1)LSEIGFGK;RVS(0.999)LS(0.001)EIGFGK;RVS(0.991)LS(0.009)EIGFGK;RVS(0.962)LS(0.038)EIGFGK 112.83 0.0011515 4862738000.0 3986270.0 3913130.0 3838980.0 3416850.0 3518030.0 3670020.0 3540330.0 3702780.0 4228160.0 3613890.0 True False 3765143.6566677615 3725137.3610721235 4086446.793385182 3741586.396686585 3794878.9461474293 3647114.0438552047 3898221.1066911197 3689935.920415347 3460432.7272398225 3581873.7461638753 1.0511659325514098 1.0399968354724063 1.1408684624246446 1.044589134581798 1.0594675343349773 1.0182140137577995 1.0883189589990565 1.0301691745464798 0.9660956729549404 1.0 21.772283055449453 -7.5616629948316945 4.614620388234795 0.9847583192558685 1.0626762320098975 0.4953405438110723 0.032176847637541466 0.16936890625572396 8.277599467003938 0.02300506485173801 0.008370421785355136 2.7437024127217232e-08 7.5616629948316945 0.07791791275402893 RVS(ph)LTQR ddPTM_KYSE-520_SHP099_60min_R1 1 RVSLTQR 7 1 Q96I34 Q96I34 PPP1R16A Protein phosphatase 1 regulatory subunit 16A 1 RVS(1)LTQR 109.66 0.0030772 0.0 23113.0 21567.0 23622.0 39079.0 35240.0 31288.0 33945.0 35921.0 47492.0 31098.0 True False 21830.87581537678 20530.888947273004 25144.711916536322 42793.05641047022 38013.18751182779 31092.719986305707 37376.49187127475 35796.39843502442 38868.649975893444 30822.495913877887 0.7082773528910548 0.6661007922472928 0.8157909076148135 1.3883709005928546 1.2332936183377765 1.0087671054668272 1.212636769446238 1.161372477266094 1.2610481021555675 1.0 14.911696071278119 -5.097182764615945 5.17701908501806 1.182589924567747 0.6982240478606212 0.7864778821726073 0.10881062245071853 0.09319778810246956 3.8602662277098103 0.029777039695329473 0.0534169985680165 7.994977307084201e-06 5.097182764615945 -0.4843658767071257 RVS(ph)LVGADDLR ddPTM_KYSE-520_SHP099_60min_R1 4 RVSLVGADDLR 11 1 A0A0G2JNZ2;A0A669KB89;Q14160;A0A0G2JMS7;A0A0G2JPP5;Q14160-2;Q14160-3;H0YCG0 A0A0G2JNZ2 SCRIB Protein scribble homolog 1 RVS(1)LVGADDLR;RVS(1)LVGADDLR;RVS(1)LVGADDLR;RVS(1)LVGADDLR 124.46 0.00012715 1765690000.0 1186530.0 1221940.0 1081380.0 1192300.0 1183880.0 1214880.0 1155520.0 1329060.0 1565190.0 1177300.0 True False 1120710.815611087 1163236.168230668 1151087.4850691769 1305615.8335219335 1277044.6206442306 1207297.4832831454 1272331.2383884345 1324449.8010649364 1280990.9512290221 1166870.0379255402 0.9604418480086137 0.9968857974095106 0.9864744553005906 1.1189042404782759 1.0944188976816636 1.0346460565818254 1.0903795598783075 1.1350448276309684 1.0978008772136834 1.0 20.154212456777955 -5.248004418953837 23.77668990449175 1.086169694956368 0.9828291803777286 0.5918331875461516 0.03804386624852887 276.0324507159334 488509.5825134375 0.010271737949833822 0.01764782410736273 5.649312265980933e-06 5.248004418953837 -0.10334051457863935 RVS(ph)PLNLSSVT(ph)P ddPTM_KYSE-520_SHP099_60min_R1 4 RVSPLNLSSVTP 12 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 2 RVS(1)PLNLS(0.021)S(0.478)VT(0.501)P;RVS(1)PLNLSS(0.008)VT(0.992)P;RVS(1)PLNLSSVT(1)P;RVS(0.999)PLNLS(0.001)S(0.015)VT(0.985)P 157.74 1.5275e-05 3082200000.0 6323000.0 5855300.0 6156400.0 5312700.0 5787800.0 5603000.0 5242000.0 5432100.0 6721500.0 5432700.0 True False 5972250.585411994 5574002.599015515 6553251.394588276 5817617.410678498 6243266.931922718 5568029.598672684 5771912.5169899035 5413257.312961669 5501045.035226312 5384570.504576648 1.1091414961204136 1.0351805393350981 1.2170425457366192 1.080423667167842 1.1594735228401627 1.0340712585971537 1.0719355447354681 1.0053275945334244 1.021631164556331 1.0 22.36039984341049 -6.690225873048091 1.3715928134585829 1.0118584768300452 1.1180534559198068 0.4647719110107257 0.049120159009565095 0.391640014681543 1.4988930636870992 0.028185510041584923 0.017576583686430197 2.040676329367835e-07 6.690225873048091 0.10619497908976161 RVS(ph)PLNLSSVTP ddPTM_KYSE-520_SHP099_60min_R1 9 RVSPLNLSSVTP 12 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 RVS(0.999)PLNLSSVTP;RVS(0.981)PLNLS(0.014)S(0.005)VTP;RVS(1)PLNLSSVTP;RVS(1)PLNLSSVTP;RVS(1)PLNLSSVTP;RVS(0.995)PLNLS(0.004)SVTP;RVS(0.996)PLNLS(0.003)S(0.001)VTP;RVS(1)PLNLSSVTP;RVS(1)PLNLSSVTP 112.42 0.00018132 16733530000.0 8459210.0 10257780.0 7744300.0 6490380.0 6727950.0 9293150.0 6885010.0 8381610.0 10061440.0 8801670.0 True False 7989960.75828293 9764980.851558313 8243509.969318116 7107223.76379609 7257401.388200949 9235148.00373105 7581014.0020222515 8352536.151192485 8234536.12426206 8723694.051395638 0.9158919044168767 1.1193630581297251 0.9449563362437383 0.8147034641430437 0.8319183760278586 1.0586281395613122 0.8690141994158338 0.9574540443513406 0.9439276613494577 1.0 23.056507743443806 -4.980777171789185 24.68560769788592 0.9193696915014775 1.0212606081283824 0.1576383921428265 0.08355402775970337 323.0530977880318 414852.87791902036 0.02153593425754709 0.0448200833828936 1.0452563827642643e-05 4.980777171789185 0.10189091662690486 RVS(ph)PVPFQSGR ddPTM_KYSE-520_SHP099_60min_R1 1 RVSPVPFQSGR 11 1 Q13233 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 1 RVS(1)PVPFQSGR 88.311 0.0020654 0.0 306630.0 279420.0 251130.0 217390.0 294020.0 272450.0 233690.0 258690.0 309540.0 299610.0 True False 289620.62264824955 265996.243782029 267318.2416222066 238050.68023931305 317157.7012550397 270749.5384898042 257313.66579461473 257792.66476870014 253335.33886840002 296955.68849305296 0.9752991233068263 0.8957438907194121 0.9001957260989135 0.8016370437196796 1.068030394920215 0.9117506381634382 0.8665052590855972 0.8681182909036309 0.8531082201320639 1.0 18.179888143642202 -10.069956197737993 4.638569860342021 1.0000029105624455 0.9039160883750234 0.14629459682583568 0.06920588434353664 3.354143626711161e-06 6.724763557452393e-07 0.0673610420001453 0.016336659804437964 8.512238869825504e-11 10.069956197737993 -0.09608682218742215 RVS(ph)QDLEVEKPDASPTSLQLR ddPTM_KYSE-520_SHP099_60min_R1 4 RVSQDLEVEKPDASPTSLQLR 21 2 O94885 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 RVS(0.964)QDLEVEKPDAS(0.028)PT(0.004)S(0.005)LQLR;RVS(0.924)QDLEVEKPDAS(0.057)PT(0.008)S(0.01)LQLR;RVS(1)QDLEVEKPDASPTSLQLR;RVS(0.963)QDLEVEKPDAS(0.028)PT(0.007)S(0.002)LQLR 136.89 1.5437000000000001e-06 4514170000.0 3187360.0 2890060.0 2527360.0 2422390.0 2609790.0 2585660.0 2340870.0 2536990.0 3269450.0 2567310.0 True False 3010550.7869553673 2751217.179531499 2690277.669518974 2652613.2172818887 2815165.625326138 2569521.936838125 2577507.984289613 2528189.773827919 2675800.296127452 2544565.6307369582 1.183129548945236 1.0812128979100806 1.0572640127736908 1.0424620946065508 1.1063442779075847 1.0098076881176528 1.0129461599082883 0.9935643802182863 1.051574486350539 1.0 21.27898797184685 -1.0000000000000007 0.4676914121914795 1.0183783163513795 4.934515046371231 0.7210968362102115 0.0291713011684926 52.35381246754246 0.6064933615937105 0.017949278989168725 197.87495103500174 0.09999999999999985 1.0000000000000007 3.916136730019851 RVS(ph)RT(ph)PEPK ddPTM_KYSE-520_SHP099_60min_R1 4 RVSRTPEPK 9 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RVS(1)RT(1)PEPK;RVS(1)RT(1)PEPK;RVS(1)RT(1)PEPK;RVS(1)RT(1)PEPK 112.02 0.0026135000000000004 17326600000.0 22709000.0 20134000.0 20369400.0 20700000.0 19096300.0 20290900.0 19753700.0 20656000.0 25134400.0 19405000.0 True False 21449286.500730854 19166732.418249864 21682444.11619235 22667321.776318055 20599070.166915927 20164256.96657282 21750596.773533683 20584349.157146618 20570626.546662536 19233086.79686153 1.1152284980188913 0.9965499880849863 1.1273512330704245 1.1785587002091067 1.0710225760680963 1.0484150141652375 1.130894744211468 1.070257175801109 1.0695436860410399 1.0 24.19708698950716 -8.275152153953313 1.263684840972128 1.0001465616847718 1.0933830746362714 0.2596392028351724 0.0474629844070194 1.4404439475517539 4.08730270326822 0.046958985003702686 0.014241500474226043 5.306984828105732e-09 8.275152153953313 0.0932365129514996 RVS(ph)S(ph)DEEHTVDSCISDMK ddPTM_KYSE-520_SHP099_60min_R1 2 RVSSDEEHTVDSCISDMK 18 1 H7C150;H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2 H7C150 USP34 Ubiquitin carboxyl-terminal hydrolase 34 2 RVS(0.994)S(0.974)DEEHT(0.03)VDS(0.002)CISDMK;RVS(0.996)S(0.996)DEEHT(0.007)VDSCISDMK 102.94 0.0003669 1293440000.0 634560.0 677510.0 551780.0 557830.0 640630.0 624900.0 570030.0 617320.0 722620.0 584310.0 True False 599359.6918360007 644961.4026367571 587348.621679215 610845.9954822954 691043.9363139109 620999.767305114 627654.1953566874 615178.6610035711 591410.4237677957 579133.4679863007 1.0349249783819754 1.113666258797555 1.0141852511502731 1.0547585820005567 1.1932377845762099 1.0722912793563566 1.0837815979433854 1.0622398721707498 1.0211988366415483 1.0 19.143536346679216 -7.7623948143004355 2.0197733107855464 1.0002501315897514 1.0827372399466546 0.2729990957764298 0.045886107984380656 0.42746910917207986 3.355552763358924 0.044122794229623945 0.012830249765554665 1.7282445089552064e-08 7.7623948143004355 0.0824871083569032 RVS(ph)S(ph)SSELDLPSGDHCEAGLLQLDVPLLR ddPTM_KYSE-520_SHP099_60min_R1 1 RVSSSSELDLPSGDHCEAGLLQLDVPLLR 29 1 Q92614;Q92614-2;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 2 RVS(0.483)S(0.517)S(0.517)S(0.483)ELDLPSGDHCEAGLLQLDVPLLR 71.903 0.010258 80829000.0 8317.8 13140.0 14849.0 21067.0 8434.9 12439.0 8726.1 10810.0 15566.0 12491.0 True False 7856.395052876779 12508.734676457892 15806.190299240026 23069.2013459755 9098.678641983995 12361.363586987227 9608.219346529115 10772.502633072972 12739.606786927432 12380.339457850945 0.6345864004475803 1.010370896455955 1.2767170361565967 1.863373894109685 0.7349296578628224 0.9984672576282483 0.7760869061175943 0.8701298271948134 1.029019182414151 1.0 13.595763252053489 RVS(ph)SPMDEVLASLK ddPTM_KYSE-520_SHP099_60min_R1 2 RVSSPMDEVLASLK 14 1 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 RVS(0.785)S(0.215)PMDEVLASLK;RVS(0.676)S(0.324)PMDEVLASLK 139.02 4.1261e-06 191670000.0 288006.0 271961.0 263482.0 228436.0 264745.0 258619.0 243517.0 247524.0 299073.0 275108.0 True False 272029.7330542726 258895.58533821648 280466.4713061058 250146.488758212 285578.9253070047 257004.86289115268 268134.07485689246 246665.39701653595 244768.88221680245 272670.7571507855 0.9976490911485665 0.9494805678595325 1.0285902098075348 0.917393897945141 1.047339759830135 0.9425464819794752 0.9833620504769265 0.904627249339141 0.8976719204305673 1.0 18.056800459707453 -7.248951268060118 24.01734168728196 0.9258621897592518 0.9801706613117763 0.17856978921844036 0.044958017672597266 599.7019648031046 1153360.9259176864 0.019757120816583592 0.011296064175253216 5.637009048392352e-08 7.248951268060118 0.054308471552524495 RVS(ph)SVPSR ddPTM_KYSE-520_SHP099_60min_R1 2 RVSSVPSR 8 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 RVS(0.498)S(0.498)VPS(0.003)R;RVS(0.5)S(0.5)VPS(0.001)R 86.014 0.006475700000000001 284490000.0 727410.0 664490.0 612790.0 526340.0 553760.0 605440.0 538050.0 549810.0 650940.0 606130.0 True False 687059.1172441144 632566.9029801763 652291.4238986659 576363.1953501093 597337.7615365996 601661.2243834352 592441.3448619648 547902.8374366192 532745.7048620416 600760.1597620039 1.1436496013921738 1.0529441619943187 1.0857767668166887 0.9593898429923187 0.9943032203953736 1.001499874129117 0.9861528519079317 0.9120159327037856 0.8867860096999328 1.0 19.196429616151203 -4.011859905520397 0.4336030599750241 0.9383053824502694 1.3221162335908787 0.7000406706706783 0.039939553344999844 3.654857964874302 0.4569700958304845 0.03017674275636329 0.7580762408745498 9.730610626677319e-05 4.011859905520397 0.3838108511406093 RVS(ph)TDLPEGQDVYTAACNSVIHR ddPTM_KYSE-520_SHP099_60min_R1 3 RVSTDLPEGQDVYTAACNSVIHR 23 1 Q15751;H0YNB1 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 RVS(0.843)T(0.157)DLPEGQDVYTAACNSVIHR;RVS(0.981)T(0.019)DLPEGQDVYTAACNSVIHR;RVS(0.912)T(0.088)DLPEGQDVYTAACNSVIHR 210.39 6.090300000000001e-21 3228190000.0 1059410.0 1573440.0 1306790.0 1763610.0 1045990.0 1210240.0 1102560.0 1044220.0 1455050.0 1177280.0 True False 1000642.4154185245 1497849.580618411 1391027.7743379283 1931222.964151317 1128303.4621310076 1202686.4432442659 1214017.5247486436 1040597.8445427811 1190849.5988255646 1166850.2151099802 0.8575585816078459 1.2836691129865652 1.192121967605601 1.6550735811188 0.9669651233039028 1.0307119351483411 1.0404227629458145 0.891800705067103 1.020567664473818 1.0 20.1541879480326 RVS(ph)VCAETYNPDEEEEDTDPR ddPTM_KYSE-520_SHP099_60min_R1 5 RVSVCAETYNPDEEEEDTDPR 21 1 P13861-2;P13861 P13861-2 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 1 RVS(0.993)VCAET(0.006)Y(0.002)NPDEEEEDTDPR;RVS(1)VCAETYNPDEEEEDTDPR;RVS(1)VCAETYNPDEEEEDTDPR;RVS(1)VCAETYNPDEEEEDTDPR;RVS(0.996)VCAET(0.004)YNPDEEEEDTDPR 162.44 3.3994e-09 4789430000.0 1870250.0 1787460.0 1917940.0 1986150.0 1721760.0 1627830.0 1921920.0 2054680.0 2428450.0 1883710.0 True False 1766503.5042490552 1701587.7385678391 2041573.4812125028 2174913.0988422297 1857252.7165256713 1617670.109157121 2116206.429731637 2047552.794645916 1987504.6962427048 1867021.794904204 0.9461611584130937 0.9113914702078487 1.0934920453444705 1.164910396214107 0.994767560611667 0.8664441484145197 1.1334663770436693 1.0966946396846828 1.0645321343689416 1.0 20.83230733846123 -4.755085460557994 24.99751755535888 1.0535430386722093 0.928776267031856 0.27333235227160446 0.08018794226853332 205.56957296789383 808728.360653963 0.02201206957899608 0.05530867179206569 1.7575777234195888e-05 4.755085460557994 -0.12476677164035332 RVS(ph)VELTNSLFK ddPTM_KYSE-520_SHP099_60min_R1 6 RVSVELTNSLFK 12 1 P14923 P14923 JUP Junction plakoglobin 1 RVS(1)VELTNSLFK;RVS(1)VELTNSLFK;RVS(1)VELTNSLFK;RVS(1)VELTNSLFK;RVS(1)VELTNSLFK;RVS(0.999)VELT(0.001)NSLFK 173.06 1.6858000000000002e-07 3577030000.0 4668630.0 5284990.0 4574130.0 4831140.0 5359450.0 5090880.0 5159930.0 5467680.0 6940700.0 4691450.0 True False 4409651.787216825 5031091.147468282 4868985.738666768 5290290.093064792 5781208.2239008285 5059105.92955395 5681546.080463898 5448713.894246102 5680443.840808633 4649887.402892869 0.9483351757019786 1.0819812850389134 1.0471190626331275 1.1377243435558257 1.2433006916047307 1.0880061152462512 1.2218674535923593 1.1717948032152894 1.2216304070663337 1.0 22.148764351081436 -4.449606176338605 0.8931181709341552 1.1675018347821016 0.8882710964204029 0.42018043469679833 0.0724022324734341 1.5203772549751944 1.1680506606091006 0.02482150164583039 0.39249107038643255 3.551352843744692e-05 4.449606176338605 -0.27923073836169865 RVSEVEEEKEPVPQPLPS(ph)DDTR ddPTM_KYSE-520_SHP099_60min_R1 1 RVSEVEEEKEPVPQPLPSDDTR 22 2 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 1 RVS(0.423)EVEEEKEPVPQPLPS(0.577)DDTR 172.17 7.7999e-10 2170900000.0 597860.0 498130.0 543490.0 642880.0 740210.0 705800.0 694090.0 863020.0 904760.0 747250.0 True False 564695.5139956372 474199.087091626 578524.235014746 703979.1219110802 798460.3157812147 701394.8403967832 764255.390865609 860026.3850503818 740478.3911435474 740629.9463517027 0.7624529858363038 0.64026453349274 0.7811245519635286 0.9505139852619218 1.0780826777453179 0.9470246833142663 1.0318991213227116 1.1612093047098873 0.9997953698619644 1.0 19.498393358512445 -5.280083351096452 2.305342631243968 1.0396402227042119 0.7005849541610658 0.8377963041754228 0.061100577445331726 0.1104480786280105 1.1490743449745193 0.0184451100115858 0.034114992453431026 5.247067472965607e-06 5.280083351096452 -0.33905526854314605 RVSHS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 7 RVSHSPPPK 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RVS(0.265)HS(0.735)PPPK;RVS(0.151)HS(0.849)PPPK;RVS(0.014)HS(0.986)PPPK;RVS(0.115)HS(0.885)PPPK;RVS(0.336)HS(0.664)PPPK;RVS(0.165)HS(0.835)PPPK;RVS(0.008)HS(0.992)PPPK 81.642 0.0059105 11757340000.0 3051430.0 2738310.0 2498170.0 2698200.0 2699090.0 2760720.0 2278560.0 2445960.0 3365820.0 2458930.0 True False 2882161.095025102 2606757.477312893 2659206.035413326 2954636.1167565896 2911493.0272786394 2743489.3224429144 2508899.0814026175 2437475.535651353 2754671.9334174558 2437145.793218593 1.1825969144089667 1.0695943938053472 1.0911148782369198 1.2123345780042882 1.194632276567092 1.1256976624364157 1.0294415247473825 1.000135298607772 1.130286067038905 1.0 21.216761126853246 -6.688155205880655 4.893779600014337 1.039964175362038 1.1468134673743609 0.48920441164004136 0.05338796318834289 0.19474508999526113 8.601582194254854 0.022153875628111407 0.01669465313163554 2.0504292762288033e-07 6.688155205880655 0.10684929201232296 RVSIS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 RVSISR 6 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 RVS(0.117)IS(0.883)R;RVSIS(1)R;RVSIS(1)R 99.755 0.021522 689130000.0 3163160.0 3281590.0 3448140.0 3044730.0 2810790.0 2830610.0 2801810.0 3292470.0 3957400.0 3442070.0 True False 2987693.2091968697 3123937.49063299 3670412.6216190713 3334100.223768545 3031983.1817925796 2812943.113028533 3085044.2978305034 3281049.1900382754 3238835.9179356718 3411575.937689939 0.8757516361250658 0.9156875144184198 1.075870122388188 0.9772903445983808 0.8887338981073976 0.8245289462714539 0.9042871547275192 0.9617400433009132 0.9493665030738745 1.0 21.70200689868454 -8.008127692164795 1.6574906227551927 0.9980055698499426 0.9273799454419267 0.10992246532389915 0.0639149470744733 1.077485944277196 6.713585529215639 0.06837488924429351 0.019801984137389386 9.814593298839006e-09 8.008127692164795 -0.0706256244080159 RVSLS(ph)EIGFGK ddPTM_KYSE-520_SHP099_60min_R1 1 RVSLSEIGFGK 11 1 E5RJM2;E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;H0YBX5 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 RVS(0.049)LS(0.951)EIGFGK 195.94 5.8152e-07 4108900000.0 4373200.0 3869200.0 3769100.0 3731300.0 3703900.0 3333900.0 3632500.0 3866600.0 4314000.0 3507700.0 True False 4130609.8782419297 3683317.824212392 4012062.2167732255 4085921.6301437453 3995375.857691799 3313091.89345259 3999708.549783642 3853187.667071223 3530686.34709013 3476624.5069493037 1.188109291062465 1.0594522982996686 1.1540107966085076 1.1752553725536188 1.149211210386851 0.9529622445076154 1.1504574456599392 1.1083128647828433 1.0155500946486353 1.0 21.72925582643417 RVSPLNLSSVT(ph)P ddPTM_KYSE-520_SHP099_60min_R1 2 RVSPLNLSSVTP 12 1 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 1 RVSPLNLSS(0.003)VT(0.997)P;RVSPLNLSS(0.005)VT(0.995)P 106.55 0.00068548 1120830000.0 1113940.0 1079750.0 1079700.0 1010150.0 987300.0 1028800.0 915100.0 930400.0 1290290.0 1007830.0 True False 1052147.5276156636 1027877.1892622088 1149299.1895810808 1106154.3522873283 1064994.89303143 1022378.8775860171 1007607.2385153506 927172.6595569927 1056005.8615639599 998901.4102798742 1.0533046773063126 1.0290076464845674 1.150563186470092 1.107370898572867 1.0661661722281857 1.0235032877764834 1.0087154028874954 0.9281923621443438 1.0571672546423636 1.0 19.929982768150964 -6.370369312756619 2.1250847246686546 0.9929157453240529 1.085576880873036 0.47191446942952153 0.04195651406613255 0.28425366217167414 2.524359461841954 0.01783949990995044 0.015245574305247743 4.262169208431744e-07 6.370369312756619 0.09266113554898303 RVSS(ph)VPSR ddPTM_KYSE-520_SHP099_60min_R1 2 RVSSVPSR 8 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 RVS(0.039)S(0.961)VPSR;RVS(0.17)S(0.83)VPSR 105.03 0.0015586999999999999 285270000.0 184493.0 186581.0 167377.0 140625.0 149715.0 140945.0 142309.0 139578.0 179730.0 157043.0 True False 174258.80551232258 177617.36869620942 178166.38923266894 153989.957719552 161496.71873817532 140065.30997410673 156694.98252199858 139093.83649574997 147095.56262459638 155651.7211976052 1.1195430681495326 1.1411204921448834 1.1446477293140922 0.989323834871421 1.0375517693964316 0.8998635472606757 1.006702536382935 0.893622219051247 0.9450301062707397 1.0 17.247962004661957 -5.475250067250993 1.3940911928071442 0.9493081494176978 1.1434481679317123 0.748260174885557 0.044288189053649556 0.1949207407588909 0.7620026149401397 0.014850470766484406 0.02779437023087252 3.3477262119905725e-06 5.475250067250993 0.19414001851401452 RVSSS(ph)S(ph)ELDLPSGDHCEAGLLQLDVPLLR ddPTM_KYSE-520_SHP099_60min_R1 1 RVSSSSELDLPSGDHCEAGLLQLDVPLLR 29 1 Q92614;Q92614-2;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 2 RVS(0.442)S(0.519)S(0.528)S(0.502)ELDLPS(0.008)GDHCEAGLLQLDVPLLR 75.893 0.011553 46631000.0 14851.0 21304.0 26735.0 32746.0 16816.0 18700.0 14333.0 18873.0 28330.0 22625.0 True False 14027.185425265476 20280.523862044058 28458.38087751246 35858.169994556105 18139.323530048117 18583.286363587195 15781.91951659982 18807.5339679913 23185.986141182977 22424.560101983647 0.6255277856721323 0.9043889275781186 1.2690719794764254 1.5990579004216068 0.8089043195297079 0.8287023816330444 0.7037783325436905 0.8387024709718882 1.0339550045011574 1.0 14.452792063917556 RVT(ph)QHESDNENEIQIQNK ddPTM_KYSE-520_SHP099_60min_R1 1 RVTQHESDNENEIQIQNK 18 1 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 RVT(0.601)QHES(0.399)DNENEIQIQNK 114.59 6.1411e-05 1115800000.0 224010.0 219460.0 179360.0 176080.0 237660.0 208410.0 182970.0 160130.0 284970.0 203490.0 True False 211583.7187471359 208916.8121838243 190921.83258614675 192814.59025961763 256362.48989957414 207109.23588423597 201466.39321511672 159574.54640462296 233226.6315091037 201687.2369128244 1.0490684585985433 1.0358454772927688 0.9466232742762459 0.9560078922741065 1.2710893055190307 1.0268832031932449 0.9989050189734955 0.7911980393365007 1.1563777414924457 1.0 17.621760265253467 -6.811090016006353 4.287119100155202 0.9665250875570293 1.0488526324866594 0.05523910344209981 0.11718816946770334 0.5572586520853556 21.34531596471647 0.05076622511610962 0.034423451976200774 1.5449341885914458e-07 6.811090016006353 0.08232754492963013 RVTENLASLT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 RVTENLASLTPK 12 1 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 RVTENLAS(0.008)LT(0.992)PK;RVTENLAS(0.032)LT(0.968)PK 97.095 0.0014794 0.0 2330800.0 2254080.0 2016190.0 1782970.0 1769820.0 2111780.0 1683940.0 1988670.0 2285600.0 1865440.0 True False 2201505.8776653945 2145790.6133569404 2146156.83341806 1952422.9327305222 1909094.7651016766 2098599.597694982 1854169.0888706543 1981771.7679290657 1870592.6552872518 1848913.6528903567 1.1907023749994166 1.1605683207555333 1.1607663938567554 1.055983836604999 1.0325494444357854 1.1350446757826131 1.0028424453311175 1.071857393032398 1.0117252649213795 1.0 20.818246419563472 -1.0000000013691817 0.2376417731599223 1.0032939036679318 2.2113705936631116 0.7028275580687532 0.03783104353586966 27.57903194030549 0.36662799954779346 0.0521209928580766 13.102198517582073 0.09999999968473428 1.0000000013691817 1.2080766899951798 RVTFGEDLS(ph)PEVFDESLPANTPLR ddPTM_KYSE-520_SHP099_60min_R1 1 RVTFGEDLSPEVFDESLPANTPLR 24 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 RVT(0.025)FGEDLS(0.975)PEVFDESLPANTPLR 148.66 4.6104e-07 48653000.0 27166.0 37120.0 42977.0 35214.0 23445.0 28978.0 22284.0 28297.0 34410.0 29427.0 True False 25659.047825921596 35336.69948174407 45747.36618563131 38560.72797252485 25289.988116197575 28797.13755315667 24536.684190881937 28198.844311569446 28162.01140551027 29166.29967385955 0.8797498521527793 1.21155922680911 1.5685008621999668 1.322098737368632 0.8670962171750523 0.9873428537445309 0.841268329039116 0.9668296844951781 0.9655668261116656 1.0 14.83201474278924 -5.76029656706961 24.99822009678489 0.9339876106542122 1.2661276164757698 0.45537999617304903 0.16406691022974104 28.130738831341198 615329.2495568191 0.052500776873947046 0.06400435136274593 1.7366145401969386e-06 5.76029656706961 0.33214000582155756 RVTIMPK ddPTM_KYSE-520_SHP099_60min_R1 3 RVTIMPK 7 1 Q71DI3;P68431;K7EK07;Q16695;P84243;Q6NXT2;Q5TEC6;A0A590UJL8 Q71DI3;Q5TEC6 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A;H3F3C;HIST2H3PS2 Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3;Histone H3.3C 0 ;; 95.352 0.016956 6132200000.0 4531290.0 5274210.0 3851150.0 6369090.0 5554330.0 4539830.0 6156850.0 4164160.0 9918800.0 3205790.0 False True 4279930.310797332 5020829.034849391 4099401.2910578614 6974406.39866326 5991424.171185317 4511495.237005564 6779244.483065487 4149715.500882253 8117795.952600267 3177389.1946668806 1.3469959292305211 1.5801743907471737 1.2901791502087754 2.195011681404821 1.8856437798811934 1.4198749226496794 2.1335895818001065 1.3060142294961483 2.5548635861875715 1.0 21.59941038421863 -5.231925851784229 24.935434218444033 1.8012549209909348 1.4232222574136926 0.13474912512860504 0.43833854301001185 1340.939757403076 1132933.76468091 0.10983104226803414 0.19019540934095247 5.862382459362638e-06 5.231925851784229 -0.3780326635772422 RVTIMPKDIQLAR ddPTM_KYSE-520_SHP099_60min_R1 4 RVTIMPKDIQLAR 13 2 Q71DI3;P68431;K7EK07;Q16695;P84243;Q6NXT2 Q71DI3 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A;H3F3C Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3;Histone H3.3C 0 ;;; 130.61 2.4363e-05 24286430000.0 2990086.0 2692839.0 13105630.0 2305791.0 5544770.0 2425589.0 4680150.0 2298386.0 14170420.0 3050894.0 False True 2824219.968991335 2563470.9724062583 13950439.879549393 2524932.6833786573 5981111.853574273 2410449.9993244433 5153265.235862327 2290413.435413323 11597428.935218576 3023865.4527196162 0.9339767304961525 0.8477463738013586 4.613445967644688 0.8350016635521178 1.9779689100237436 0.797141948612999 1.7041979269373784 0.7574455514723255 3.835299260682394 1.0 21.52796251741074 RVTQHES(ph)DNENEIQIQNK ddPTM_KYSE-520_SHP099_60min_R1 1 RVTQHESDNENEIQIQNK 18 1 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 RVT(0.008)QHES(0.992)DNENEIQIQNK 217.94 1.7266e-18 1372200000.0 534810.0 615790.0 473450.0 451190.0 451970.0 455680.0 316480.0 381750.0 586720.0 428200.0 True False 505143.02318269655 586206.5240803658 503969.3445467839 494070.9619447801 487537.46764247474 452835.93209408596 348472.88694715104 380425.7983511198 480186.438007584 424406.4811345592 1.19023399885955 1.381238388521469 1.1874685400645404 1.1641456573047329 1.1487512309876806 1.0669863732606693 0.8210828590920287 0.8963713215079409 1.1314305020128559 1.0 18.6950871623325 -6.0430547856171195 1.3084571603138744 0.9563403729959755 1.257775726306377 0.6193724733870726 0.09411299056592849 0.2806131255232959 0.9922762924184734 0.042588090058005484 0.04639904178523707 9.056183512545399e-07 6.0430547856171195 0.3014353533104014 RVTSIADR ddPTM_KYSE-520_SHP099_60min_R1 2 RVTSIADR 8 1 B1ALA9;A0A2R8Y7H4;P60891-2;P60891;P11908;P11908-2 B1ALA9 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 0 ; 95.311 0.0086002 533970000.0 600340.0 564650.0 345230.0 347160.0 520420.0 547590.0 384510.0 464940.0 485640.0 562820.0 False True 567037.9434518795 537523.3664430706 367484.0781875301 380153.98202254 561374.0932152508 544172.2876918033 423380.0232559684 463327.2316578113 397460.01798814366 557833.8526673337 1.0164996992214361 0.9635904380360807 0.6587697688664309 0.6814824525345654 1.0063464067858003 0.9755096165099942 0.7589715490222367 0.830582850865665 0.7125060913525635 1.0 19.089475962753074 -6.799466209823218 24.999927308776144 0.8113971056978441 0.8734905929758519 0.03441180767833574 0.13713765865881927 690.9153455360029 454221.6450952988 0.06134379575453002 0.04135905447513663 1.5868423780348328e-07 6.799466209823218 0.062093487278007786 RVVLGDGVQLPPGDYST(ph)TPGGTLFSTT(ph)PGGTR ddPTM_KYSE-520_SHP099_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.002)S(0.083)T(0.474)T(0.44)PGGT(0.327)LFS(0.116)T(0.122)T(0.433)PGGT(0.003)R 80.484 0.0061543 3387000000.0 252200.0 311780.0 296130.0 301540.0 286990.0 309160.0 254390.0 211120.0 404520.0 287590.0 True False 238209.96325176433 296801.62080867914 315219.01362475246 330198.2709386935 309574.4802502683 307230.41776292096 280106.2238071462 210387.67399577843 331069.36511935503 285042.1763416342 0.8357007594772936 1.0412551034305562 1.1058679724889209 1.158418993205195 1.0860655227359448 1.077841959060449 0.9826834309299826 0.7380931365876907 1.1614750117630153 1.0 18.120815878265176 -6.9035662278275725 5.5104616109200855 0.9435776898717991 1.058712402222272 0.07943911790280389 0.1250704204890703 0.4048488803933684 18.827437452690003 0.053003478403914374 0.03534783240481802 1.2486300199760963e-07 6.9035662278275725 0.1151347123504729 RVVLGDGVQLPPGDYSTT(ph)PGGT(ph)LFSTTPGGTR ddPTM_KYSE-520_SHP099_60min_R1 1 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.011)S(0.309)T(0.33)T(0.353)PGGT(0.669)LFS(0.098)T(0.093)T(0.133)PGGT(0.004)R 54.09 0.050056 3205200000.0 166720.0 186780.0 212680.0 195610.0 218860.0 173740.0 142380.0 176290.0 245840.0 195030.0 True False 157471.70925191953 177806.80843750405 226389.69310003144 214200.71558770892 236083.036856942 172655.6242144192 156773.15989489187 175678.49113639543 201201.65312207636 193302.1859310439 0.8146400853847247 0.9198385811370624 1.1711698551654803 1.108113260882213 1.2213159190096234 0.8931902315683595 0.811026316850949 0.9088282695316476 1.0408658968494562 1.0 17.56049842659561 RVVLGDGVQLPPGDYSTT(ph)PGGTLFS(ph)TTPGGTR ddPTM_KYSE-520_SHP099_60min_R1 2 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDYS(0.083)T(0.139)T(0.777)PGGT(0.143)LFS(0.281)T(0.281)T(0.281)PGGT(0.016)R;RVVLGDGVQLPPGDY(0.002)S(0.051)T(0.222)T(0.723)PGGT(0.007)LFS(0.536)T(0.115)T(0.34)PGGT(0.004)R 125.86 7.201100000000001e-08 310692000.0 267378.0 282740.0 277707.0 211951.0 250578.0 278783.0 219205.0 238640.0 327331.0 255671.0 True False 252546.0093351712 269156.74599860795 295608.4375669101 232094.75931460806 270297.06300620816 277043.0118876968 241364.3806346382 237812.21353899472 267895.9417430134 253405.9538490278 0.9966064549755254 1.0621563617994707 1.1665410108833725 0.9159009715015759 1.066656323186643 1.0932774375646725 0.9524810959194603 0.9384634020109749 1.057180929152984 1.0 17.951090895867225 -6.768186470092962 24.999914789486258 0.9819033061853205 1.05066683496131 0.17235148645721599 0.0674250970166936 278.9444872192359 1033556.7187286757 0.027844210070323686 0.019251874967986478 1.705350017151024e-07 6.768186470092962 0.06876352877598946 RVVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTR ddPTM_KYSE-520_SHP099_60min_R1 11 RVVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 32 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 RVVLGDGVQLPPGDY(0.001)S(0.047)T(0.187)T(0.763)PGGT(0.014)LFS(0.143)T(0.102)T(0.74)PGGT(0.002)R;RVVLGDGVQLPPGDY(0.001)S(0.023)T(0.121)T(0.854)PGGT(0.205)LFS(0.254)T(0.23)T(0.311)PGGT(0.002)R;RVVLGDGVQLPPGDY(0.002)S(0.023)T(0.123)T(0.843)PGGT(0.022)LFS(0.16)T(0.145)T(0.681)PGGT(0.001)R;RVVLGDGVQLPPGDY(0.002)S(0.025)T(0.148)T(0.812)PGGT(0.015)LFS(0.211)T(0.191)T(0.579)PGGT(0.016)R;RVVLGDGVQLPPGDY(0.01)S(0.079)T(0.233)T(0.618)PGGT(0.203)LFS(0.203)T(0.189)T(0.383)PGGT(0.082)R;RVVLGDGVQLPPGDYS(0.017)T(0.415)T(0.565)PGGT(0.003)LFS(0.182)T(0.126)T(0.648)PGGT(0.044)R;RVVLGDGVQLPPGDY(0.014)S(0.062)T(0.204)T(0.712)PGGT(0.039)LFS(0.21)T(0.167)T(0.495)PGGT(0.098)R;RVVLGDGVQLPPGDY(0.002)S(0.014)T(0.049)T(0.931)PGGT(0.01)LFS(0.114)T(0.261)T(0.544)PGGT(0.076)R;RVVLGDGVQLPPGDY(0.01)S(0.073)T(0.314)T(0.597)PGGT(0.029)LFS(0.292)T(0.232)T(0.446)PGGT(0.007)R;RVVLGDGVQLPPGDY(0.001)S(0.017)T(0.274)T(0.668)PGGT(0.044)LFS(0.034)T(0.034)T(0.883)PGGT(0.045)R;RVVLGDGVQLPPGDYS(0.018)T(0.068)T(0.91)PGGT(0.008)LFS(0.121)T(0.024)T(0.843)PGGT(0.008)R 126.39 1.3384e-06 13746820000.0 5484697.0 5682949.0 5340771.0 4316898.0 4647454.0 4780281.0 4291402.0 4478364.0 6809108.0 4714613.0 True False 5180449.9239376 5409931.59975964 5685045.644195737 4727174.687997294 5013182.189403919 4750445.493123798 4725218.794207459 4462829.600542016 5572745.630844267 4672845.196733406 1.1086286204300198 1.157738245542887 1.2166133062079436 1.0116266405105538 1.072832926908948 1.016606648224649 1.01120807458177 0.9550561622845536 1.1925808359198256 1.0 22.155869813331012 -5.2707159889304585 24.947458577388932 1.0348098999647886 1.1606678773521393 0.4386482547689051 0.06417338868849166 552.3030310355817 1485299.862505794 0.017481065554230152 0.026324755694855328 5.361471615058675e-06 5.2707159889304585 0.12585797738735072 RWDDDVVFK ddPTM_KYSE-520_SHP099_60min_R1 3 RWDDDVVFK 9 1 Q9P013 Q9P013 CWC15 Spliceosome-associated protein CWC15 homolog 0 ;; 144.77 0.00086208 1066890000.0 1740700.0 1589010.0 1057550.0 923960.0 1656750.0 1610050.0 1194870.0 1236740.0 1277850.0 1349140.0 False True 1644139.901000581 1512671.5744473622 1125721.365139828 1011772.8806012972 1787126.799381972 1600001.0807322785 1315659.1204074274 1232450.0375972865 1045824.6519770785 1337187.6692150373 1.2295506000034628 1.1312335652446888 0.8418574229005976 0.7566423950014686 1.3364816626158842 1.1965419047511254 0.9839001291267907 0.9216731996345476 0.7821076099146231 1.0 20.350770525739467 -7.121116549157459 3.3901117535300407 0.8882760370497705 1.0708787673813565 0.1796987155429467 0.17103874844681785 0.4932217170299494 10.424631067438627 0.09738895152004574 0.052588276354150074 7.566298153019991e-08 7.121116549157459 0.18260273033158592 RWDDSQK ddPTM_KYSE-520_SHP099_60min_R1 4 RWDDSQK 7 1 Q16543;K7EKQ2 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed 0 ;;; 160.63 0.0024327 15666700000.0 14735800.0 14119800.0 9285300.0 7956500.0 12998600.0 14174900.0 10305000.0 11510700.0 11262900.0 11101900.0 False True 13918375.798910975 13441463.61374812 9883845.295005275 8712683.367791051 14021515.868082985 14086429.191187825 11346729.967108151 11470772.068317562 9217841.274603933 11003545.803147491 1.2648991559547758 1.2215574737648003 0.8982418460218584 0.7918068887666052 1.27427250442055 1.2801718139945848 1.0311885068777098 1.042461427755081 0.8377155363834838 1.0 23.39146515962621 -4.6320209905752785 7.367396987936191 1.032028221199174 1.2535848802156206 0.25285703097334555 0.1532979715440966 0.3270911173160337 19.612636829424474 0.042618261421996526 0.11410957882307587 2.3333452829446414e-05 4.6320209905752785 0.2215566590164466 RWDNDDMTDDIPESSLFS(ph)PMPSEEK ddPTM_KYSE-520_SHP099_60min_R1 5 RWDNDDMTDDIPESSLFSPMPSEEK 25 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 RWDNDDMTDDIPES(0.002)S(0.021)LFS(0.974)PMPS(0.003)EEK;RWDNDDMTDDIPESSLFS(0.999)PMPSEEK;RWDNDDMTDDIPES(0.008)S(0.024)LFS(0.967)PMPSEEK;RWDNDDMTDDIPESSLFS(1)PMPSEEK;RWDNDDMTDDIPES(0.01)S(0.004)LFS(0.985)PMPSEEK 257.25 8.487899999999999e-38 854720000.0 693217.0 675996.0 609440.0 648527.0 646110.0 623775.0 614132.0 672652.0 806940.0 683580.0 True False 654762.8711161705 643520.1374693178 648725.4775384765 710162.8110932471 696955.1811369763 619881.788847412 676214.4559107288 670318.7272101578 660420.0373020185 677524.0130171921 0.9664054093084313 0.9498115566466107 0.9574944431113692 1.0481736402680488 1.028679674441725 0.9149222417769605 0.998067142888956 0.9893652687305542 0.9747551741538943 1.0 19.369912554256665 -5.073071639206185 24.99989828287436 0.9922535528877129 0.9569911160783074 0.19365459176489497 0.033139954881735455 240.3960639136109 82245.31917388922 0.00946230692680346 0.016389204151143734 8.451394233766259e-06 5.073071639206185 -0.03526243680940544 RWDQTADQT(ph)PGATPK ddPTM_KYSE-520_SHP099_60min_R1 2 RWDQTADQTPGATPK 15 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 RWDQTADQT(1)PGATPK;RWDQTADQT(1)PGATPK 114.88 0.00029943 8525500000.0 1068610.0 1000650.0 900520.0 972390.0 880050.0 979980.0 848640.0 901140.0 1128160.0 964940.0 True False 1009332.0730787789 952577.2719937293 958568.9600829447 1064805.6532402863 949304.9282004553 973863.5813148766 934428.8131282547 898014.1556676567 923314.5825992572 956391.3823119607 1.055354629648419 0.9960119775347502 1.0022768688752925 1.1133576409547388 0.992590424545258 1.0182688795884787 0.977036002634597 0.9389609445212858 0.9654149960733186 1.0 19.867241604954973 -6.659574518816959 1.8837140409775894 0.9628591010388922 1.0329044143476251 0.401047592323199 0.035819834589039284 0.34130542177151985 2.4752906140479602 0.017731506948231123 0.012119382845048118 2.189906038793322e-07 6.659574518816959 0.07004531330873298 RWDQTADQTPGAT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 12 RWDQTADQTPGATPK 15 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 RWDQTADQTPGAT(1)PK;RWDQTADQTPGAT(1)PK;RWDQTADQT(0.003)PGAT(0.997)PK;RWDQTADQT(0.003)PGAT(0.997)PK;RWDQTADQT(0.001)PGAT(0.999)PK;RWDQTADQTPGAT(1)PK;RWDQTADQTPGAT(1)PK;RWDQTADQTPGAT(1)PK;RWDQTADQTPGAT(1)PK;RWDQTADQTPGAT(1)PK;RWDQTADQT(0.026)PGAT(0.974)PK;RWDQTADQT(0.042)PGAT(0.958)PK 284.81 6.6051e-33 9870210000.0 7346900.0 7286610.0 6154050.0 5964870.0 6554870.0 6343740.0 6378210.0 6069920.0 7896430.0 6682690.0 True False 6939352.8113179505 6936550.318175413 6550749.909828148 6531769.451396434 7070700.976891442 6304146.365569127 7022981.712130901 6048864.864249973 6462637.364801318 6623486.565654148 1.0476888180466335 1.0472657035562878 0.9890183734646382 0.9861527439742521 1.0675194864221977 0.9517866916585973 1.0603149327045247 0.9132448302403365 0.9757153276815103 1.0 22.65915941276928 -7.259320515850201 24.984550848771825 0.9583600608398677 1.018883970282846 0.30269493275520276 0.04031499584602818 217.93519439745407 2569809.7810905557 0.019192425618393988 0.010373547487364559 5.504013420192813e-08 7.259320515850201 0.06052390944297836 RWESER ddPTM_KYSE-520_SHP099_60min_R1 2 RWESER 6 1 H0YBA0;E7ER80;E5RJ52;P53677-2;Q9Y2T2;P53677 H0YBA0 AP3M2;AP3M1 AP-3 complex subunit mu-2;AP-3 complex subunit mu-1 0 ; 112.59 0.021531 627610000.0 291258.0 264979.0 221141.0 169915.0 251633.0 291165.0 195944.0 217434.0 243001.0 206634.0 False True 275101.3381315719 252249.01109841221 235396.10269811004 186063.67051319254 271435.08550407976 289347.7312328269 215751.93174915464 216679.77220347695 198878.14395671024 204803.3835188196 1.3432460607092096 1.2316642760700913 1.149376043762867 0.9084990067856713 1.3253447323009548 1.4128073777952912 1.053458824957982 1.0579892210792796 0.9710686441781129 1.0 17.643880024469546 -6.972551801453897 24.983932586004187 1.0198620725267649 1.21641518541059 0.3790386685111552 0.13049511282607013 265.14000926306716 241335.53432965535 0.05927673870079868 0.03996349713501514 1.0652417969716023e-07 6.972551801453897 0.19655311288382515 RWHHEEEK ddPTM_KYSE-520_SHP099_60min_R1 3 RWHHEEEK 8 1 A0A0A0MRK1;E9PAV9;Q5T3I0;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 0 ;; 155.58 0.00061109 1100640000.0 999240.0 958800.0 753160.0 954570.0 776600.0 877230.0 836920.0 865410.0 1105740.0 369725.0 False True 943810.1652644441 912737.8088118583 801709.8986986069 1045292.0457980653 837714.0017504377 871754.8821780536 921524.0411520769 862408.0946982133 904965.4894370508 366449.52414169733 2.575552983661387 2.49075997833449 2.187777158604263 2.8524857502444885 2.286028351960729 2.378922129097831 2.5147366293092674 2.3534157854841165 2.4695501830891233 1.0 18.48325496533195 -10.71482840004794 0.5796038783482735 4.1374680577791444e-13 2.466215016363176 0.867197525142819 0.1710487235261333 25.89313168375517 2.997566666022645 36.594008632436726 0.06837826202407225 1.9282866740496208e-11 10.71482840004794 2.4662150163627623 RWIYEDVER ddPTM_KYSE-520_SHP099_60min_R1 1 RWIYEDVER 9 1 O43852;O43852-3;O43852-5;O43852-6;O43852-10;O43852-13;O43852-14;O43852-11 O43852 CALU Calumenin 0 124.67 0.0016605999999999997 51785000.0 65344.0 67041.0 58164.0 43779.0 71902.0 65291.0 55700.0 55264.0 58688.0 58286.0 False True 61719.23805996545 63820.249729407486 61913.3445056904 47939.742997363726 77560.27833358239 64883.49465053329 61330.69957961423 55072.30208271457 48031.738604085614 57769.63138582185 1.0683682166459683 1.104737007982201 1.0717282250287221 0.829843325071473 1.3425787299140994 1.1231419189296985 1.0616425638932907 0.9533088711421261 0.8314357812550253 1.0 15.818023668765424 -7.2896260459476885 3.297241370382544 0.910604513536009 1.0893645132784717 0.26423723151057565 0.1218208932112061 0.3424997290731067 7.680074674169649 0.07456460672655464 0.03404223215188685 5.1330317912000985e-08 7.2896260459476885 0.1787599997424627 RWNSDDLNAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 RWNSDDLNASPK 12 1 O43156 O43156 TTI1 TELO2-interacting protein 1 homolog 1 RWNSDDLNAS(1)PK;RWNSDDLNAS(1)PK;RWNSDDLNAS(1)PK 120.66 0.00019626 885380000.0 1572150.0 1486440.0 1349770.0 1390540.0 1386070.0 1336850.0 1298970.0 1315280.0 1656350.0 1305880.0 True False 1484939.7054966749 1415029.1912080732 1436778.3339083602 1522696.503518906 1495145.8233404995 1328506.2232706728 1430282.5643255191 1310717.6006686587 1355598.593185613 1294310.9191592678 1.1472820660906051 1.093268371812253 1.1100720179673935 1.176453417010488 1.1551674340441214 1.0264196983933482 1.1050533091805894 1.0126759971398898 1.0473515854027988 1.0 20.303752792255978 -6.692888042245086 1.162660062260274 1.0237149771509142 1.1329758256734344 0.6121305860761874 0.03711430461082804 0.3529262369824135 0.9624025111041788 0.024697901917528037 0.014977016239730382 2.0282055078095548e-07 6.692888042245086 0.10926084852252016 RWQS(ph)PVTK ddPTM_KYSE-520_SHP099_60min_R1 5 RWQSPVTK 8 1 A9Z1X7 A9Z1X7 SRRM1 1 RWQS(0.999)PVT(0.001)K;RWQS(0.999)PVT(0.001)K;RWQS(0.999)PVT(0.001)K;RWQS(1)PVTK;RWQS(1)PVTK 83.081 0.0048906999999999996 8066500000.0 8033730.0 7000640.0 6757380.0 6046700.0 7086070.0 6982490.0 6257490.0 6394840.0 8022310.0 6548530.0 True False 7588082.982056296 6664318.746225133 7192971.526990273 6621376.549993355 7643703.3947768845 6938909.689886837 6890058.156417241 6372657.79260688 6565660.729977888 6490515.118879246 1.1691033520566814 1.0267780945213942 1.1082281444916078 1.0201619484304822 1.177672843337705 1.069084589249831 1.0615579858023638 0.9818416066962776 1.011577757654406 1.0 22.62990155139472 -7.044114985005586 2.5467866413684503 0.9972293215112673 1.0930784636453441 0.43876396309719856 0.04903283650858383 0.2773131478372161 3.5435298473750194 0.025663648872384245 0.01378160226611646 9.034102526635762e-08 7.044114985005586 0.0958491421340768 RWQT(ph)LLS(ph)VDDLVEK ddPTM_KYSE-520_SHP099_60min_R1 1 RWQTLLSVDDLVEK 14 1 F5H4C6;H0YFA9;H7C3P4;F6S8M0;P15586-2;P15586 F5H4C6 GNS N-acetylglucosamine-6-sulfatase 2 RWQT(1)LLS(1)VDDLVEK 47.666000000000004 0.058505999999999996 452390000.0 219180.0 192580.0 197450.0 219780.0 237220.0 212520.0 204980.0 244680.0 255950.0 199270.0 True False 207021.64847550212 183328.1677315269 210177.94293117028 240667.82512073344 255887.8644028317 211193.5838497088 225701.37881201645 243831.26218874112 209475.9319744362 197504.62282971415 1.0481863437393737 0.9282221606002103 1.0641672074297872 1.218542744329757 1.2956044306034031 1.0693095727273032 1.142765043057312 1.2345597722994524 1.0606128047698586 1.0 17.591526896108583 -5.0196905270742525 5.521295592770155 1.1579365309528438 0.9887279752586862 0.33578732691258517 0.08846860264646404 0.16546937769773795 16.38012569832494 0.023380691680700956 0.044550111233574316 9.556733445565778e-06 5.0196905270742525 -0.1692085556941576 RWS(ph)AEVTSSTYSDEDRPPK ddPTM_KYSE-520_SHP099_60min_R1 7 RWSAEVTSSTYSDEDRPPK 19 2 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 RWS(1)AEVTSSTYSDEDRPPK;RWS(0.865)AEVT(0.024)S(0.078)S(0.016)T(0.016)YS(0.002)DEDRPPK;RWS(0.99)AEVT(0.005)S(0.004)S(0.001)TYSDEDRPPK;RWS(1)AEVTSSTYSDEDRPPK;RWS(0.839)AEVT(0.031)S(0.031)S(0.031)T(0.031)YS(0.037)DEDRPPK;RWS(1)AEVTSSTYSDEDRPPK;RWS(1)AEVTSSTYSDEDRPPK 217.29 7.3078e-19 10094860000.0 2143821.0 2296305.0 1929300.0 2071592.0 2040226.0 1907564.0 2055301.0 2269428.0 2461610.0 2149637.0 True False 2024898.975528788 2185987.0609759223 2053665.7649891444 2268475.480833152 2200780.178901995 1895658.1855010625 2263070.8828847515 2261555.883956479 2014643.6761382774 2130592.8885722803 0.9503922529684597 1.0259994167354805 0.963894029687349 1.064715597710113 1.0329426098745442 0.8897327103965654 1.0621789338653267 1.061467864689982 0.9455788982231603 1.0 21.022823520141547 -4.24766047760102 22.51123265936778 1.0067019338138625 0.9503920982797426 0.08249100583170355 0.054588290420267124 1537.8033482808767 2512200.0958543974 0.013420173384491625 0.23234596628921073 5.653788034805179e-05 4.24766047760102 -0.056309835534119945 RWS(ph)EPSSQK ddPTM_KYSE-520_SHP099_60min_R1 3 RWSEPSSQK 9 1 Q9BQK8;Q9BQK8-2 Q9BQK8 LPIN3 Phosphatidate phosphatase LPIN3 1 RWS(0.807)EPS(0.192)S(0.001)QK;RWS(0.997)EPS(0.003)S(0.001)QK;RWS(0.84)EPS(0.144)S(0.017)QK 169.33 9.481600000000001e-05 3015790000.0 5021600.0 4422300.0 4122530.0 3989500.0 4119660.0 4438800.0 4284890.0 4260850.0 4919700.0 4172400.0 True False 4743041.837688575 4209846.069992373 4388274.880081218 4368660.880513088 4443853.8043409875 4411095.802710745 4718048.497696469 4246070.105839871 4026406.4955445775 4135435.7820780813 1.1469267297641768 1.0179933365757405 1.0611396504085195 1.0563967404464953 1.0745793281567835 1.0666580344028804 1.1408830281305011 1.0267527606742801 0.9736353573652361 1.0 21.979607934395773 -7.51058827768429 11.65698891635318 0.9912259073801261 1.0763670240746215 0.5150737043093441 0.036963572943236454 0.47015818918416186 448.50467469938235 0.021473152034243246 0.009374660149139695 3.086112277510793e-08 7.51058827768429 0.08514111669449542 RWS(ph)GNEPTDEFSDLPLR ddPTM_KYSE-520_SHP099_60min_R1 6 RWSGNEPTDEFSDLPLR 17 1 Q96II8-3;Q96II8;Q96II8-2;E9PD99;Q96II8-4 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 RWS(0.998)GNEPT(0.002)DEFSDLPLR;RWS(1)GNEPTDEFSDLPLR;RWS(1)GNEPTDEFSDLPLR;RWS(1)GNEPTDEFSDLPLR;RWS(0.998)GNEPT(0.002)DEFSDLPLR;RWS(1)GNEPTDEFSDLPLR 237.6 2.1180999999999995e-23 4647050000.0 1451536.0 1438240.0 1348820.0 1283196.0 1371727.0 1348770.0 1301605.0 1337207.0 1630990.0 1340320.0 True False 1371016.4045147232 1369144.791557747 1435767.0953883063 1405150.562033054 1479674.1108410028 1340351.826129173 1433183.9358406414 1332568.5410234593 1334843.3299120355 1328445.8075531793 1.032045414814439 1.0306365406651625 1.080787102661567 1.057740220973827 1.1138385189881144 1.0089623667810153 1.0788426051645839 1.00310342615923 1.004815794759923 1.0 20.341307945237684 -7.2762859779216225 23.981104449190653 1.0029696905666663 1.057712424408938 0.44458275527228086 0.028124326017238167 459.02963578693215 741445.5435696883 0.015144357984326175 0.007327045966240864 5.2931478141309494e-08 7.2762859779216225 0.054742733842271685 RWS(ph)SSDWTLDPQELESK ddPTM_KYSE-520_SHP099_60min_R1 4 RWSSSDWTLDPQELESK 17 1 A0A0A0MRN7;Q6YP21-3;Q6YP21 A0A0A0MRN7 CCBL2 Kynurenine--oxoglutarate transaminase 3 1 RWS(0.704)S(0.116)S(0.18)DWTLDPQELESK;RWS(0.742)S(0.129)S(0.129)DWTLDPQELESK;RWS(0.65)S(0.133)S(0.215)DWT(0.002)LDPQELESK;RWS(0.61)S(0.13)S(0.26)DWTLDPQELESK 203.71 4.0432e-13 1505840000.0 1642000.0 1560040.0 1431470.0 1415710.0 1504650.0 1574190.0 1391230.0 1412060.0 1739820.0 1554830.0 True False 1550914.9867541497 1485093.3367322218 1523744.8466329798 1550258.652751267 1623057.394712591 1564364.8962938688 1531869.1054963516 1407161.893437282 1423912.5452930813 1541055.4158394362 1.0063979340479088 0.963685874932193 0.9887670689655069 1.0059720350204393 1.0532115704797593 1.0151256601254248 0.9940389487304189 0.913115699133233 0.9239852964777744 1.0 20.555487310942784 -7.140908186586273 5.6204207996753786 0.9393625634596385 1.0049490877495546 0.4391691600820883 0.030051677833459443 0.20306776976390692 8.476711990812335 0.015103361633250252 0.008603795000732705 7.229226192164304e-08 7.140908186586273 0.06558652428991607 RWS(ph)TELVPEGLQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 RWSTELVPEGLQSPR 15 1 H3BV44;H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BMM1 H3BV44 MYO9A Unconventional myosin-IXa 2 RWS(0.99)T(0.01)ELVPEGLQS(1)PR;RWS(0.638)T(0.362)ELVPEGLQS(1)PR;RWS(0.755)T(0.245)ELVPEGLQS(1)PR 98.7 0.00094592 894050000.0 521810.0 521000.0 503020.0 530500.0 533310.0 529370.0 457180.0 572000.0 642570.0 572160.0 True False 492864.1590975537 495970.37796305696 535445.4740604572 580918.5604993587 575278.4628811826 526066.005470169 503396.21604682243 570015.8655058035 525895.4858715128 567091.1075337448 0.8691093063352714 0.8745867663487286 0.9441965619758823 1.0243831243021053 1.014437460292834 0.927656946972785 0.8876813784579893 1.005157474580722 0.9273562552560735 1.0 19.113221008242945 -4.818380272056384 3.982212592239358 0.9675130705819367 0.870002266228698 0.45658640478097257 0.04190993565302843 0.1961861549100023 6.240019870670366 0.011833623935549353 0.028570500894198936 1.5192167077075712e-05 4.818380272056384 -0.09751080435323867 RWS(ph)TELVPEGLQSPR ddPTM_KYSE-520_SHP099_60min_R1 1 RWSTELVPEGLQSPR 15 1 H3BV44;H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BMM1 H3BV44 MYO9A Unconventional myosin-IXa 1 RWS(0.744)T(0.256)ELVPEGLQSPR 52.318000000000005 0.048994 312180000.0 230330.0 235190.0 220640.0 189660.0 220860.0 176690.0 156230.0 155210.0 230800.0 154770.0 True False 217553.1357485284 223891.11937261285 234862.8074364817 207685.2293766418 238240.42547849863 175587.21217017228 172023.25305786604 154671.6127362864 188892.5379945298 153398.8582092379 1.4182187422267727 1.4595357617800693 1.5310596843956035 1.3538903209654705 1.5530782188322145 1.144644844296489 1.1214115611162128 1.0082970273827752 1.2313816425991782 1.0 17.226928218933455 -6.341948515536635 5.347665326261211 1.0978190258082428 1.460193538885904 0.8373426070825456 0.0798927952053228 0.08340982429340754 4.120453842163925 0.026909380523029082 0.02370221231492443 4.550420009796477e-07 6.341948515536635 0.3623745130776612 RWSEPS(ph)SQK ddPTM_KYSE-520_SHP099_60min_R1 1 RWSEPSSQK 9 1 Q9BQK8;Q9BQK8-2 Q9BQK8 LPIN3 Phosphatidate phosphatase LPIN3 1 RWS(0.05)EPS(0.755)S(0.195)QK 148.78 0.00031164 1385800000.0 2083200.0 1798700.0 1730400.0 1654000.0 1707300.0 1627400.0 1554700.0 1782600.0 1982500.0 1542300.0 True False 1967640.743243756 1712287.7520962574 1841944.352737892 1811195.6627067658 1841654.7967918166 1617242.7929466232 1711864.2484098051 1776416.5766619667 1622527.9747580367 1528636.4218912441 1.2871868778380744 1.1201406217822536 1.204959090572381 1.1848439804057112 1.2047696695027736 1.0579643202179851 1.1198635750755368 1.162092274671937 1.0614217687883094 1.0 20.543813879418472 -1.0000001735436943 0.04398087357528137 0.6342233607193464 2.0175038567534522 0.6247679490970122 0.0497198901650606 435.937687150617 1.4584367900061068 11.839756193004556 43.11107261106415 0.09999996004009563 1.0000001735436943 1.3832804960341059 RWSEPSS(ph)QK ddPTM_KYSE-520_SHP099_60min_R1 1 RWSEPSSQK 9 1 Q9BQK8;Q9BQK8-2 Q9BQK8 LPIN3 Phosphatidate phosphatase LPIN3 1 RWS(0.209)EPS(0.088)S(0.703)QK 105.36 0.0017312 842020000.0 1607400.0 1371900.0 1417200.0 1319600.0 1410500.0 1574400.0 1425700.0 1523700.0 1744600.0 1445400.0 True False 1518234.3177275416 1305991.8647361172 1508554.9796001737 1445014.3872477922 1521498.3253528115 1564573.5856059715 1569823.6694911302 1518414.6403342541 1427824.6177870727 1432594.8805041837 1.0597792428193085 0.9116267847309979 1.0530227352685058 1.0086692385353475 1.0620576312665164 1.0921256294419672 1.0957903667355355 1.0599051141379672 0.9966701942174803 1.0 20.450199260906615 -5.307750010236564 1.7052638999949954 1.0568478890911017 0.9914141081175508 0.1313697950114926 0.049182700377361055 0.5737954273260905 3.253261823424107 0.015393837072713468 0.03126784641288078 4.923228463410107e-06 5.307750010236564 -0.0654337809735509 RWYPEEYEFAPK ddPTM_KYSE-520_SHP099_60min_R1 2 RWYPEEYEFAPK 12 1 H0YG54;H0YGR4;F5GYG5;Q9Y3B8-2;Q9Y3B8-3;Q9Y3B8 H0YG54 REXO2 Oligoribonuclease, mitochondrial 0 ; 154.23 2.8431999999999998e-05 1288780000.0 1831800.0 1574760.0 1082650.0 1169940.0 1727170.0 1582690.0 1287560.0 1200150.0 1201740.0 1272340.0 False True 1730186.4023972333 1499106.1658370516 1152439.3513012477 1281130.7458447143 1863088.4527469822 1572811.8446409542 1417719.1301746506 1195986.9597671153 983534.3094001132 1261068.05746554 1.3720008148287528 1.1887591291860282 0.9138597591769858 1.015909282818166 1.4773892984739985 1.2472061561863268 1.1242209504726839 0.9483920813685323 0.7799216732019947 1.0 20.26621470662276 -7.251522578471677 3.0063715908703244 0.8847076148310687 1.1918835083482375 0.4065258042109614 0.1584869248839239 0.2926327416722385 5.337635921715507 0.10303713699426048 0.048038152620371866 5.603732834430021e-08 7.251522578471677 0.3071758935171688 RYASGS(ph)SASLGGPESAVA ddPTM_KYSE-520_SHP099_60min_R1 1 RYASGSSASLGGPESAVA 18 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 RYAS(0.107)GS(0.785)S(0.085)AS(0.023)LGGPESAVA 73.953 0.012948 475020000.0 314130.0 280360.0 302970.0 187040.0 244510.0 294800.0 265320.0 312800.0 361500.0 257550.0 True False 296704.58269736974 266891.0847710604 322499.9309691395 204816.22536437327 263751.54592840525 292960.0438494923 292141.1348736668 311714.9698080691 295860.712673408 255268.30737086813 1.1623244019332986 1.0455316115028177 1.2633763050757159 0.8023566555279609 1.033232635280541 1.1476553704093924 1.1444473381069893 1.2211267940723722 1.159018586054104 1.0 17.96165490667028 -6.272430105126052 22.40313317720314 1.1488949263405046 1.057318308081865 0.07693272201072021 0.12112869963310426 419.4406751782766 854968.4504429396 0.04275041991387565 0.03815055912148935 5.340352136955294e-07 6.272430105126052 -0.0915766182586395 RYDDPEVQK ddPTM_KYSE-520_SHP099_60min_R1 1 RYDDPEVQK 9 1 P38646;D6RJI2;A0A3B3ITI4 P38646 HSPA9 Stress-70 protein, mitochondrial 0 91.65799999999999 0.0094963 1322600000.0 1213500.0 1370600.0 884210.0 800680.0 1318800.0 1227400.0 968830.0 1074300.0 1163700.0 991940.0 False True 1146184.735947725 1304754.318687456 941207.5913860222 876776.3864667807 1422582.0570544396 1219739.3413190886 1066768.7912696153 1070573.5040435041 952401.4144897508 983152.1833176435 1.1658263648257676 1.327113279944685 0.957336623319007 0.8918012911369448 1.4469601768608615 1.2406414408836306 1.0850495064454904 1.08891941879319 0.9687222697058716 1.0 19.907055224801518 -7.409263489464851 1.915068058196536 0.9885731365861637 1.1652648707932864 0.17260377969411422 0.15339419732446707 0.7177719983676807 4.768654805630721 0.13367653745231547 0.047324383987212205 3.897054779301969e-08 7.409263489464851 0.1766917342071227 RYDSNSGGER ddPTM_KYSE-520_SHP099_60min_R1 1 RYDSNSGGER 10 1 P62191;P62191-2 P62191 PSMC1 26S protease regulatory subunit 4 0 132.56 0.0007864 543160000.0 74916.0 78794.0 47581.0 45395.0 74901.0 66028.0 53076.0 67332.0 65726.0 56764.0 False True 70760.26013865651 75008.61796779471 50648.147392291736 49709.32715149561 80795.28257160647 65615.89476015703 58441.44005184211 67098.44100740702 53791.815217627634 56261.11512172377 1.257711653698351 1.333223093881267 0.9002336210846853 0.8835467808262769 1.4360768071660468 1.1662743374032618 1.0387536742810926 1.1926255080838009 0.9561100077957274 1.0 15.779850527378695 -1.000000617023279 0.06837090131177491 0.855149242187289 1.7319785698262082 0.10324207960691978 0.1703739926296862 781.460050541266 3.962134927301976 9.094361000649926 66.25913941026371 0.09999985792524052 1.000000617023279 0.8768293276389192 RYEEDMYWR ddPTM_KYSE-520_SHP099_60min_R1 2 RYEEDMYWR 9 1 Q96KR1 Q96KR1 ZFR Zinc finger RNA-binding protein 0 ; 172.88 0.00016746 838510000.0 479340.0 520490.0 422280.0 378740.0 536870.0 470450.0 383830.0 366170.0 505860.0 382080.0 False True 452750.05465939967 495484.8791285818 449500.844471889 414735.33572766656 579118.6146275529 467513.74704543344 422631.28221980826 364899.84173472016 414008.57569286274 378695.0684537415 1.195553077857691 1.308400664290949 1.1869730606930167 1.0951696239961135 1.5292478378241507 1.2345387780050834 1.116020031487243 0.9635716758199442 1.0932505072836323 1.0 18.53067710832443 -6.891371099059621 3.2307262539568398 1.0232516672999679 1.2628190819530818 0.49238321813789865 0.11018815878832748 0.2189577026860588 4.5186485956246205 0.052189619162426246 0.03318675194721879 1.2841888680836154e-07 6.891371099059621 0.23956741465311393 RYEEIVK ddPTM_KYSE-520_SHP099_60min_R1 2 RYEEIVK 7 1 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ; 166.68 0.0018629000000000002 1219690000.0 1725690.0 1413430.0 891270.0 883530.0 1561610.0 1436730.0 962570.0 1252530.0 1240060.0 1178140.0 False True 1629962.5356222733 1345526.7011983178 948722.6902824212 967500.4255570194 1684499.8226545248 1427762.8351420679 1059875.9693779047 1248185.2657727005 1014896.3633687033 1167702.596179049 1.3958712954444301 1.1522854411741004 0.8124694535978828 0.8285503763739756 1.4425760704536732 1.2227110223219395 0.9076591701054925 1.0689239450670116 0.8691394253037052 1.0 20.15524144829183 -4.372371987036849 3.7632965808279737 1.0308318563909624 1.398929620739757 0.2757897532564485 0.18475191782390513 0.3403729705593406 7.706722632188728 0.050007905239544966 0.27136886737151467 4.2425601950032945e-05 4.372371987036849 0.3680977643487946 RYEPS(ph)DKDRQSPPPAK ddPTM_KYSE-520_SHP099_60min_R1 1 RYEPSDKDRQSPPPAK 16 3 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RYEPS(0.963)DKDRQS(0.037)PPPAK 131.11 0.015144 1321100000.0 696790.0 634380.0 611460.0 622620.0 651290.0 649610.0 648990.0 694270.0 791690.0 522750.0 True False 658137.669683572 603903.4325762066 650875.6899705906 681793.6176024713 702542.817666808 645555.543029406 714596.242732026 691861.7394138362 647939.0528808028 518118.8416933464 1.2702446171087078 1.1655693327084844 1.2562285668735005 1.3159019953302478 1.3559491783211675 1.2459603687053022 1.3792130013966306 1.3353340657379937 1.250560683651593 1.0 18.98292352342393 -8.041548122701268 19.343229862212702 0.9999999980695946 1.2899350805111818 0.6884047400879575 0.05829941227293829 224.1217632544206 104343.4359543342 0.06137190571545596 0.015846150998108464 9.087655962472592e-09 8.041548122701268 0.28993508244158717 RYEPSDKDRQS(ph)PPPAK ddPTM_KYSE-520_SHP099_60min_R1 8 RYEPSDKDRQSPPPAK 16 3 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 RYEPSDKDRQS(1)PPPAK;RYEPSDKDRQS(1)PPPAK;RYEPSDKDRQS(1)PPPAK;RYEPS(0.001)DKDRQS(0.999)PPPAK;RYEPS(0.004)DKDRQS(0.996)PPPAK;RYEPS(0.006)DKDRQS(0.994)PPPAK;RYEPS(0.009)DKDRQS(0.991)PPPAK;RYEPS(0.19)DKDRQS(0.81)PPPAK 201.67 1.6636e-12 32986600000.0 13194880.0 10769910.0 10583020.0 11838060.0 11044970.0 10982020.0 11319910.0 11355850.0 13926650.0 8801020.0 True False 12462933.703058854 10252507.357635515 11265218.402630698 12963145.663157469 11914146.301717162 10913477.139606528 12464236.974475238 11316459.206825305 11397921.422276946 8723049.80988994 1.428735817710079 1.1753351844914974 1.291431167784749 1.4860795187091824 1.3658234862088314 1.2511079699709091 1.4288852231869236 1.2973053523086653 1.3066440832831556 1.0 23.056401197026524 -8.611373394928622 1.3673531563149606 0.9998882413908454 1.339975772742028 0.574757056596507 0.08751380066665218 2.8591259742303543 5.656913668536691 0.08546550876095431 0.025055001425469868 2.4469585068608225e-09 8.611373394928622 0.34008753135118264 RYESQLR ddPTM_KYSE-520_SHP099_60min_R1 4 RYESQLR 7 1 O15212 O15212 PFDN6 Prefoldin subunit 6 0 ;;; 199.07 0.00010999 2803840000.0 1284150.0 1328300.0 908470.0 942220.0 1276700.0 1202910.0 983710.0 1104770.0 1187150.0 1009950.0 False True 1212915.6396104395 1264486.4741810535 967031.4298033926 1031768.3055112262 1377169.0265706722 1195402.1924931926 1083153.0068844224 1100937.810725256 971593.4856161446 1001002.6287292108 1.2117007536236502 1.26321993358433 0.9660628274583603 1.0307348611272609 1.3757896203719373 1.1942048484036203 1.0820680943260887 1.0998350844721703 0.9706203138043688 1.0 19.933014332159036 -7.415905478866188 1.6261139757798 0.9879742327259142 1.1669029029389877 0.2878357641421717 0.1100557866481923 0.5825177460282117 2.7297583417626377 0.10115649919460322 0.035169381714526896 3.8379076575900844e-08 7.415905478866188 0.17892867021307346 RYFGGTEDR ddPTM_KYSE-520_SHP099_60min_R1 5 RYFGGTEDR 9 1 Q16658 Q16658 FSCN1 Fascin 0 ;;;; 182.16 3.1741e-05 4644920000.0 5358180.0 5147950.0 3453360.0 2731500.0 4788000.0 5025420.0 3503660.0 3956260.0 4190520.0 4020830.0 False True 5060951.074132984 4900634.754769512 3675969.111171362 2991100.9387445776 5164788.360006564 4994054.489695102 3857844.1452264106 3942536.657458021 3429627.202412635 3985208.574358409 1.2699338013814652 1.2297059647771336 0.9224031923506457 0.750550663267637 1.295989472982116 1.2531475822439508 0.9680407118584745 0.9892924257026477 0.8605891356551599 1.0 21.926223802026254 -4.685427932053578 6.964115931602843 1.0137381815442181 1.2560156842505403 0.2834357629181533 0.15540103883415513 0.31083879257384883 23.208229896462495 0.04303238949585398 0.1151240376034938 2.0633460358659576e-05 4.685427932053578 0.2422775027063222 RYGDFFIR ddPTM_KYSE-520_SHP099_60min_R1 1 RYGDFFIR 8 1 B0QY89;Q9Y262-2;Q9Y262;B0QY90;H0Y7E6 B0QY89 EIF3L Eukaryotic translation initiation factor 3 subunit L 0 149.82 0.0010366 341260000.0 216940.0 202850.0 155020.0 117890.0 216240.0 189420.0 135290.0 108670.0 146950.0 128300.0 False True 204905.90574083163 193104.78151594242 165012.83724076982 129094.23015507896 233256.85776270236 188237.7595182186 148966.43350315987 108293.04913376858 120267.58430804213 127163.36181588956 1.6113596150241747 1.5185567506112694 1.2976445014066216 1.015184156124977 1.8343086753275504 1.4802829748300785 1.171457182131103 0.8516057423093146 0.945772293140289 1.0 16.95632353703667 -6.974930706494265 3.375033479038375 0.9291894511213143 1.4503951083822748 0.581754998354294 0.20135550786216494 0.18607146278681053 4.428765278172922 0.10236651785595664 0.06180639690396809 1.0594227470346725e-07 6.974930706494265 0.5212056572609605 RYGLLANTEDPTEMAS(ph)LDS(ph)DEETVFESR ddPTM_KYSE-520_SHP099_60min_R1 1 RYGLLANTEDPTEMASLDSDEETVFESR 28 1 Q9BVV8 Q9BVV8 C19orf24 Uncharacterized membrane protein C19orf24 2 RYGLLANTEDPTEMAS(1)LDS(0.997)DEET(0.003)VFESR 96.027 0.0025196999999999997 70424000.0 73621.0 86178.0 68716.0 62109.0 62677.0 63782.0 44367.0 60827.0 90223.0 63442.0 True False 69537.09637017494 82037.87952418484 73145.5433094874 68011.82068624822 67609.32331665249 63383.91287926842 48852.04934019292 60616.00533412853 73840.7775367438 62879.953237129084 1.1058706756339471 1.3046746268211833 1.1632569609847727 1.0816137287788072 1.0752126844256433 1.0080146313124445 0.776909759394461 0.9639957126802736 1.174313493177705 1.0 15.94031252423587 -5.648823401501886 1.3843150426616246 0.9737418476176717 1.206312725137251 0.42014497069287204 0.10266383737868714 0.3975180274725919 1.5787508041385472 0.039920592421060976 0.06245661454691443 2.2447945459149554e-06 5.648823401501886 0.23257087751957928 RYLS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 RYLSPER 7 1 C9JRL6;O95834-2;O95834-3;K7ESL7 C9JRL6 EML2 Echinoderm microtubule-associated protein-like 2 1 RY(0.001)LS(0.999)PER 59.04 0.03325 0.0 129540.0 126500.0 131300.0 146120.0 173410.0 124520.0 164570.0 103280.0 164260.0 157120.0 True False 122354.15796841204 120422.75011962892 139763.8080874277 160007.2008674201 187056.3804320672 123742.82449165129 181206.34164842233 102921.74578573318 134434.52465763185 155728.03903751035 0.7856912520354827 0.773288810826306 0.8974864703315417 1.0274784287810816 1.2011734148081759 0.7946085063194385 1.163607676359265 0.6609069658993287 0.863264736963974 1.0 17.24866920137432 -4.884395874794886 3.851563076016983 0.9568078612021786 0.7791263522100232 0.17699872672101424 0.1524491716738873 0.39219296498107714 10.781266679943547 0.04159201406772086 0.09613446318755145 1.3049808096087907e-05 4.884395874794886 -0.1776815089921554 RYMKHK ddPTM_KYSE-520_SHP099_60min_R1 1 RYMKHK 6 2 A0A087WZ50;Q8TCT7-2;Q8TCT7-4;Q8TCT7 A0A087WZ50 SPPL2B Signal peptide peptidase-like 2B 0 47.045 0.059771000000000005 0.0 76275.0 83505.0 68530.0 60235.0 102720.0 74816.0 51765.0 62942.0 70676.0 54204.0 False True 72043.8736995572 79493.29445643969 72947.55345187681 65959.71628968696 110803.47960314846 74349.04559241388 56997.91137771505 62723.66889277325 57843.019996973075 53723.79473007386 1.34100493201438 1.4796664095647065 1.3578257794035116 1.2277560924556878 2.062465619933622 1.3839127702346439 1.0609435104890008 1.1675211925724482 1.0766741308501302 1.0 15.713273591330935 -6.673669071076275 4.9429652380723725 1.0907743316254939 1.4925566077619026 0.4608065037332715 0.21319991142047268 0.20589567210144524 8.598439485634547 0.0865616122541782 0.06556840333226684 2.1199759246508495e-07 6.673669071076275 0.4017822761364087 RYPS(ph)SIS(ph)SSPQK ddPTM_KYSE-520_SHP099_60min_R1 1 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RY(0.01)PS(0.733)S(0.307)IS(0.505)S(0.406)S(0.04)PQK 72.321 0.02336 462470000.0 916150.0 893860.0 739770.0 865030.0 744890.0 776380.0 787970.0 939770.0 872950.0 807360.0 True False 865329.3332002526 850917.6238887871 787456.7578738496 947242.1911192469 803508.6051556583 771534.3244364614 867625.697446116 936510.1572139667 714444.2852787044 800207.4185165745 1.0813812933706628 1.0633713262321651 0.984065805505325 1.1837458253951776 1.00412541368987 0.9641679226952591 1.0842510046389242 1.1703342602722557 0.8928238713446847 1.0 19.610014478035925 RYPS(ph)SISSS(ph)PQKDLTQAK ddPTM_KYSE-520_SHP099_60min_R1 1 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RY(0.08)PS(0.511)S(0.409)IS(0.004)S(0.108)S(0.889)PQKDLTQAK 123.32 3.054e-05 1094500000.0 701540.0 789080.0 687280.0 565360.0 558120.0 525900.0 492830.0 516880.0 834440.0 553070.0 True False 662624.1777146816 751171.4123667738 731583.1684868808 619091.6444183177 602040.8687315919 522617.66302729974 542650.0659572938 515087.0639206985 682926.7305206036 548170.2300819494 1.2087927095486777 1.3703250763079136 1.3345912060520178 1.1293784493290813 1.098273557543592 0.953385708211791 0.9899298359857479 0.9396480065028247 1.2458296584593962 1.0 19.06426445513726 -5.5131616568493405 2.1366877541731943 1.0246049065460585 1.3122918889871522 0.6283804470798025 0.09125835784313803 0.19374599532109876 1.76967994836563 0.02879630494695997 0.04466398653061618 3.0678798230615993e-06 5.5131616568493405 0.2876869824410937 RYPS(ph)SISSSPQK ddPTM_KYSE-520_SHP099_60min_R1 2 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPS(0.317)S(0.082)IS(0.25)S(0.1)S(0.25)PQK;RYPS(0.33)S(0.212)IS(0.034)S(0.314)S(0.11)PQK 189.99 3.7916e-08 7097400000.0 4552200.0 3800500.0 3508700.0 3906000.0 3826800.0 3995400.0 4127100.0 3886800.0 4432100.0 3687600.0 True False 4299680.391414282 3617918.2753332015 3734876.4161184905 4277225.06561828 4127947.388486455 3970463.2265816196 4544307.544614466 3873317.597985939 3627342.3641488496 3654930.7329093916 1.1764054384668619 0.9898732807046312 1.0218733784717886 1.1702615940449113 1.129418774292484 1.0863306357166058 1.2433361605726285 1.0597513006498778 0.9924517396425236 1.0 21.80141263426111 -7.523390172923091 13.89923430429544 1.006154956023752 1.1126186248613332 0.3206145071916062 0.06998473771481897 0.13619565473385117 2539.601552122807 0.046917171868661615 0.018756529011441897 2.9964692623173255e-08 7.523390172923091 0.1064636688375813 RYPSGEER ddPTM_KYSE-520_SHP099_60min_R1 1 RYPSGEER 8 1 H0YDT4;E9PN51;F8W9K7;E9PKH6;E9PPW7;O00217 H0YDT4 NDUFS8 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial 0 143.04 0.034068 0.0 140990.0 132600.0 104680.0 97801.0 140970.0 138490.0 108390.0 131270.0 140260.0 96734.0 False True 133169.00364340306 126229.69696334212 111427.84029392179 107095.97763505724 152063.53699041874 137625.63253974292 119347.11898445936 130814.6550086482 114792.31966686629 95877.01201791312 1.388956547983812 1.3165793792130076 1.1621955873333145 1.1170141348903115 1.5860270756248438 1.435439315881368 1.2447938924312871 1.3644006238347053 1.1972872042092753 1.0 16.548897328022207 -9.927052564502205 7.569515080568164 0.9999999976299051 1.3136626851004298 0.3315965970471033 0.13310259858906975 5.48727650057391e-09 7.995885812131715e-10 0.13539208872816774 0.03283740462000311 1.1828983758555367e-10 9.927052564502205 0.3136626874705247 RYPSS(ph)IS(ph)SSPQK ddPTM_KYSE-520_SHP099_60min_R1 1 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.081)S(0.636)IS(0.61)S(0.367)S(0.306)PQK 92.06299999999999 0.0028081 1443200000.0 2683800.0 2391700.0 2161200.0 2506100.0 1982400.0 2288200.0 2362400.0 2781900.0 2524700.0 2539900.0 True False 2534924.263977341 2276799.1419851114 2300514.410042265 2744278.9905135627 2138403.601686929 2273918.4950353066 2601214.4468021677 2772250.238200341 2066278.122507754 2517398.462012296 1.0069618704505903 0.9044254123223463 0.9138459583403957 1.0901249968667688 0.8494497926949492 0.9032811171329777 1.0332946834021948 1.1012361690188401 0.8207989929635785 1.0 21.2635021583584 -6.764318182248157 24.997130109658595 0.9972688028406165 0.9437324381191934 0.05100407330580492 0.09035964386879147 223.6539871391546 1941987.0262278034 0.03624134667969611 0.025652076937309632 1.7206075242691135e-07 6.764318182248157 -0.05353636472142309 RYPSS(ph)IS(ph)SSPQKDLTQAK ddPTM_KYSE-520_SHP099_60min_R1 1 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RY(0.081)PS(0.379)S(0.49)IS(0.427)S(0.346)S(0.276)PQKDLTQAK 78.48899999999999 0.0061600000000000005 1067900000.0 1061400.0 950990.0 995180.0 864630.0 872180.0 855320.0 712310.0 757280.0 1149700.0 815190.0 True False 1002522.0261515565 905303.0129349084 1059330.8951443003 946804.1752395111 940815.6039746299 849981.6306151547 784317.2462756732 754653.1724304812 940943.4615784696 807968.0508082228 1.240794144209933 1.1204688255053152 1.311104930553424 1.1718336811615364 1.164421789987262 1.0519990608105172 0.9707280448665124 0.9340136304592613 1.1645800358531868 1.0 19.62393872056754 -6.211239320148706 2.201064659445837 1.011040412217219 1.2108464230149336 0.609888430533692 0.07207616011468333 0.21030556134895081 2.0010196634171957 0.027229211452462137 0.025945711738847188 6.148379697997038e-07 6.211239320148706 0.19980601079771465 RYPSS(ph)ISS(ph)SPQK ddPTM_KYSE-520_SHP099_60min_R1 2 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.007)S(0.92)IS(0.074)S(0.689)S(0.31)PQK;RYPS(0.275)S(0.618)IS(0.177)S(0.929)S(0.002)PQK 149.59 2.1997e-05 2731900000.0 6414320.0 5757960.0 5199340.0 6010410.0 5648420.0 5150460.0 5365450.0 6449860.0 6492950.0 5713910.0 True False 6058504.882970085 5481338.95872584 5534497.775638141 6581637.559304336 6092918.518886442 5118314.068673872 5907842.047745802 6427486.941068641 5313993.953949666 5663289.202754713 1.0697855373557708 0.9678719843690183 0.9772585466668512 1.1621581246641837 1.0758621537326314 0.9037705625529849 1.0431821219499324 1.1349388510730143 0.9383229010033349 1.0 22.43320877400869 RYPSS(ph)ISSS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 5 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.023)S(0.936)IS(0.167)S(0.28)S(0.594)PQK;RYPS(0.021)S(0.971)IS(0.021)S(0.078)S(0.908)PQK;RYPS(0.19)S(0.808)IS(0.112)S(0.145)S(0.745)PQK;RYPS(0.023)S(0.975)IS(0.002)S(0.014)S(0.985)PQK;RYPS(0.161)S(0.781)IS(0.057)S(0.004)S(0.997)PQK 211.9 1.3684e-10 8500750000.0 10895780.0 9891500.0 8689400.0 9884550.0 8838520.0 9363320.0 9230130.0 10787410.0 10736880.0 10017980.0 True False 10291369.363201061 9416297.492555814 9249532.62753158 10823974.660101684 9534061.239700347 9304880.046732794 10163201.617787883 10749990.992510412 8787333.246718824 9929228.491070492 1.036472206522012 0.9483413037603108 0.9315459540335714 1.090112355641312 0.9602016156919417 0.9371201453467222 1.0235640792160041 1.0826612563280262 0.8849965790012193 1.0 23.243250192883664 RYPSS(ph)ISSS(ph)PQKDLTQAK ddPTM_KYSE-520_SHP099_60min_R1 4 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RY(0.001)PS(0.442)S(0.558)ISS(0.021)S(0.979)PQKDLTQAK;RY(0.002)PS(0.203)S(0.795)IS(0.001)S(0.078)S(0.922)PQKDLTQAK;RYPS(0.169)S(0.827)IS(0.005)S(0.339)S(0.66)PQKDLTQAK;RY(0.001)PS(0.447)S(0.552)ISS(0.051)S(0.948)PQKDLTQAK 193.88 7.9672e-13 6962170000.0 3737820.0 3587800.0 3710890.0 2973290.0 2888700.0 2707460.0 2470840.0 2683400.0 4436670.0 2790290.0 True False 3530475.6734405607 3415436.7026024065 3950099.907033931 3255870.587647764 3116024.255545312 2690561.7378587048 2720616.620274581 2674091.9117102697 3631082.567349181 2765570.201412768 1.276581470120356 1.2349846338587462 1.4283130129967614 1.1772872682763684 1.1267203609416667 0.9728777582591301 0.983745275706535 0.9669224488838623 1.3129598248832277 1.0 21.399145533307 -5.680260550192439 2.4127587385910583 1.044407284791001 1.3047261079090684 0.5229616138253357 0.10778535573342798 0.22671360502672763 2.692956748644068 0.034813329352704404 0.046672777952716064 2.088043056567038e-06 5.680260550192439 0.2603188231180673 RYPSS(ph)ISSSPQK ddPTM_KYSE-520_SHP099_60min_R1 1 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPS(0.001)S(0.687)IS(0.198)S(0.057)S(0.057)PQK 128.51 0.00065401 1453200000.0 1843600.0 1730200.0 1529700.0 1778700.0 1625600.0 1881000.0 1794400.0 1977200.0 1943800.0 1546300.0 True False 1741331.8328745146 1647078.5949168545 1628306.9096065378 1947747.113214347 1753525.4716012273 1869259.9812784782 1975795.4636563687 1970341.5546819502 1590854.9192104293 1532600.9850031966 1.1361938625342085 1.0746949865188944 1.062446733063493 1.2708768507089825 1.1441500356321184 1.219665131087319 1.289177994135406 1.2856193973265915 1.0380098504289499 1.0 20.547550707359868 -5.2439379246188365 24.825458535361694 1.1950462670301552 1.0894701659156008 0.13178325008769687 0.09583643944550821 1213.9054184826502 1721897.5448958448 0.025143533734246437 0.043428896218273685 5.702457738783125e-06 5.2439379246188365 -0.1055761011145544 RYPSSIS(ph)SS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 1 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 RYPS(0.079)S(0.332)IS(0.577)S(0.027)S(0.984)PQK 70.68 0.025924000000000003 439790000.0 1374000.0 1251800.0 1157000.0 1240600.0 1155400.0 1230400.0 1155200.0 1312900.0 1375600.0 1338500.0 True False 1297781.4809989072 1191661.649009894 1231582.071265453 1358506.2510000106 1246323.406673263 1222720.6172062946 1271978.8896655343 1308345.8563331624 1125825.7160540523 1326641.9313372432 0.9782454860979368 0.8982541715749252 0.9283455031637884 1.0240187792275257 0.9394572696921921 0.9216658906399884 0.9587959340192052 0.9862087315560435 0.8486281712196675 1.0 20.33934760047513 -10.22236958910648 3.986772449976424 1.0000435676603412 0.9443413556255615 0.11996869064773863 0.04640984208152912 61855114.67626464 33032855.95256493 26947.02195585557 0.0112707859935394 5.992808649598572e-11 10.22236958910648 -0.05570221203477965 RYPSSIS(ph)SSPQKDLTQAK ddPTM_KYSE-520_SHP099_60min_R1 1 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPS(0.093)S(0.062)IS(0.281)S(0.281)S(0.281)PQKDLTQAK 75.018 0.0073036 1558700000.0 1025600.0 1062800.0 1027000.0 782130.0 811360.0 793480.0 722140.0 718140.0 1193800.0 740900.0 True False 968707.9235170869 1011741.4927046758 1093202.0632581003 856463.4000440411 875209.4159930934 788527.5969935394 795140.9586072274 715648.9399551359 977036.013249001 734336.2024114775 1.3191613328281502 1.3777633315397368 1.4886942243459436 1.1663096511264346 1.1918374895844766 1.0737964360249481 1.0828023403940512 0.9745521705249248 1.3305023094878403 1.0 19.48608120031461 -5.4073880938791845 4.292455363456492 1.109513156324657 1.3922952218253637 0.6130651789259383 0.10180635302351186 0.150917771921903 4.591338994408196 0.028766083841158932 0.04338283335429664 3.913919654196242e-06 5.4073880938791845 0.2827820655007067 RYPSSISS(ph)SPQK ddPTM_KYSE-520_SHP099_60min_R1 2 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPS(0.003)S(0.004)IS(0.01)S(0.492)S(0.492)PQK;RYPSS(0.041)IS(0.01)S(0.915)S(0.034)PQK 216.01 1.0306e-10 36457900000.0 10915900.0 9611600.0 8203600.0 9549700.0 9600300.0 9417900.0 9807000.0 9973400.0 10086000.0 8707200.0 True False 10310373.266692836 9149844.308694273 8732417.182224084 10457300.61677801 10355788.991765039 9359119.392707372 10798387.267096533 9938804.60320907 8254636.647369269 8630060.982099097 1.1947045667555682 1.0602293920834784 1.011860426054613 1.2117296318611264 1.199967070133749 1.0844789407769568 1.2512527187809084 1.1516494059340525 0.9564980669883386 1.0 23.040939323196667 -7.758494582682381 24.997839993028634 0.9782489848854455 1.1439045012881028 0.46881636722277875 0.07128976638928602 65.99426592332078 560252.1539928729 0.0556568393057799 0.018961027792800313 1.7438351096412354e-08 7.758494582682381 0.1656555164026573 RYPSSISS(ph)SPQKDLTQAK ddPTM_KYSE-520_SHP099_60min_R1 4 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPS(0.052)S(0.052)IS(0.052)S(0.659)S(0.184)PQKDLTQAK;RYPSSIS(0.002)S(0.844)S(0.154)PQKDLTQAK;RYPS(0.001)S(0.008)IS(0.03)S(0.847)S(0.114)PQKDLTQAK;RYPS(0.009)S(0.009)IS(0.059)S(0.529)S(0.394)PQKDLTQAK 201.61 4.575800000000001e-13 4857090000.0 2907840.0 2979750.0 2990480.0 2531900.0 2588860.0 2641840.0 2405820.0 2301870.0 3684640.0 2445210.0 True False 2746536.3185646706 2836598.3373040636 3183251.1257371744 2772531.0147565044 2792588.5534015484 2625351.2966192127 2649023.7641405314 2293885.3502304945 3015602.258215615 2423547.341744592 1.1332711646505633 1.170432402307494 1.3134676888323995 1.1439970521725795 1.1522731598019051 1.0832680061159243 1.0930356995764854 0.9464990886372534 1.2442926970202415 1.0 21.208688833810356 -6.062508314610586 1.6536386906962912 1.0675478257932574 1.2003689550512213 0.3064476901812213 0.08457949002038119 0.44644524948396497 2.4580310186408294 0.03280902540424939 0.034650970435790865 8.659477445465954e-07 6.062508314610586 0.13282112925796397 RYPSSISSS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 7 RYPSSISSSPQK 12 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPSSISS(0.04)S(0.96)PQK;RYPSSIS(0.001)S(0.456)S(0.543)PQK;RYPSS(0.003)IS(0.001)S(0.007)S(0.989)PQK;RYPSSIS(0.001)S(0.011)S(0.988)PQK;RYPSSISS(0.092)S(0.908)PQK;RYPS(0.003)S(0.156)IS(0.008)S(0.075)S(0.759)PQK;RYPS(0.001)S(0.014)IS(0.01)S(0.093)S(0.882)PQK 213.94 1.1620999999999999e-10 49972090000.0 31128180.0 26774860.0 26671590.0 28768440.0 27815200.0 27246250.0 28617760.0 28743890.0 31608080.0 26974030.0 True False 29401437.802911572 25488555.53571581 28390883.367452845 31502583.88805311 30004097.993160944 27076196.04726672 31510722.463222604 28644184.154464375 25868849.446854983 26735061.079677776 1.0997333320199743 0.9533756238578608 1.0619344868089236 1.1783247397178864 1.1222752737964783 1.0127598349811984 1.1786291555239785 1.0714089662670638 0.9676001625640112 1.0 24.672229636973785 -7.708649191658943 6.146755449501641 0.9839472706978559 1.0852924762733214 0.27720480453964735 0.06540847843557997 0.24737924996920654 19.91989728800078 0.0493558865382483 0.01751197395643502 1.9559187426121523e-08 7.708649191658943 0.10134520557546545 RYPSSISSS(ph)PQKDLTQAK ddPTM_KYSE-520_SHP099_60min_R1 2 RYPSSISSSPQKDLTQAK 18 2 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 RYPSSISS(0.022)S(0.978)PQKDLTQAK;RYPSSISS(0.001)S(0.999)PQKDLTQAK 225.5 9.4726e-19 18540900000.0 8912300.0 9043100.0 9401300.0 6833000.0 7488000.0 7454800.0 6400200.0 6067300.0 10973100.0 6946900.0 True False 8417916.952770418 8608655.902030176 10007322.840611849 7482406.265583636 8077262.999108016 7408271.82798234 7047194.6759326225 6046253.952418461 8980661.64934045 6885355.8706064215 1.222582697389179 1.2502848166179066 1.453421294218517 1.0867130771738354 1.173107556225212 1.0759461046317513 1.0235047844102134 0.8781323821227476 1.3043133598480927 1.0 22.71509979151171 -5.364410254073948 8.058882455750938 1.0729935717566481 1.302470969035324 0.4428227984457269 0.11885479078003428 0.27044505494887894 18.929547677063546 0.03327420955647669 0.04942793978050269 4.321054519608249e-06 5.364410254073948 0.2294773972786759 RYPT(ph)PYPDELK ddPTM_KYSE-520_SHP099_60min_R1 3 RYPTPYPDELK 11 1 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 RY(0.003)PT(0.896)PY(0.101)PDELK;RY(0.009)PT(0.98)PY(0.011)PDELK;RY(0.002)PT(0.995)PY(0.002)PDELK 96.48899999999999 0.0037514000000000002 1807120000.0 2560930.0 2883930.0 2228290.0 2739880.0 2506330.0 2637040.0 2402190.0 3004260.0 3565730.0 2466540.0 True False 2418870.1078126132 2745381.6739328173 2371929.1387900556 3000277.3714250415 2703563.9119330104 2620581.255199681 2645026.80831514 2993838.9232595568 2918283.3167384486 2444688.3745390847 0.9894390356679553 1.1229986212252612 0.9702378280574321 1.227263729263942 1.1058930619092642 1.0719489986914013 1.0819484543971076 1.2246300814614082 1.1937240538024214 1.0 21.221219145274702 -5.251408621712952 24.9954722908193 1.1333602405527936 1.0371025139064902 0.2630628418313211 0.0773735066582693 1013.2382452263154 2524865.3713511885 0.02089578102289646 0.03569497988186431 5.605203419586135e-06 5.251408621712952 -0.09625772664630339 RYS(ph)DFEWLK ddPTM_KYSE-520_SHP099_60min_R1 10 RYSDFEWLK 9 1 A0A087X0R6;Q9UMY4-3;Q9UMY4;Q9UMY4-1 A0A087X0R6 SNX12 Sorting nexin-12 1 RY(0.001)S(0.999)DFEWLK;RY(0.001)S(0.999)DFEWLK;RY(0.056)S(0.944)DFEWLK;RYS(1)DFEWLK;RY(0.002)S(0.998)DFEWLK;RY(0.042)S(0.958)DFEWLK;RY(0.049)S(0.951)DFEWLK;RYS(1)DFEWLK;RY(0.001)S(0.999)DFEWLK;RYS(1)DFEWLK 161.87 8.759999999999999e-05 2419420000.0 3107120.0 2858350.0 2702769.0 2946990.0 3018830.0 2913630.0 2879460.0 2970220.0 3338270.0 2918990.0 True False 2934761.859709843 2721030.5755291767 2876993.8143233005 3227071.043555146 3256394.746206901 2895444.9544138256 3170543.9176214677 2959917.0000745584 2732124.318938471 2893130.019539852 1.0143898960256934 0.9405144453072152 0.9944225786233009 1.115425515535042 1.1255611480346899 1.0008001489246383 1.0958871174845222 1.0230846799430495 0.944348957871244 1.0 21.464199729899097 -5.0185962744237465 24.01696917095136 1.048865540937898 0.974956243430582 0.19546247871659794 0.05617047033220015 626.9584531408296 809716.9269759873 0.015613559904189537 0.027717466981326537 9.580843045841481e-06 5.0185962744237465 -0.07390929750731601 RYS(ph)DFEWLR ddPTM_KYSE-520_SHP099_60min_R1 8 RYSDFEWLR 9 1 O60493-4;O60493;O60493-3 O60493-4 SNX3 Sorting nexin-3 1 RYS(1)DFEWLR;RY(0.028)S(0.972)DFEWLR;RYS(1)DFEWLR;RYS(1)DFEWLR;RYS(1)DFEWLR;RYS(1)DFEWLR;RYS(1)DFEWLR;RYS(1)DFEWLR 213.99 4.7517e-09 3668906000.0 1612940.0 1547660.0 1398855.0 1480180.0 1482053.0 1595161.0 1394565.0 1459192.0 1716344.0 1572576.0 True False 1523467.0028838264 1473308.090514981 1489027.431547135 1620855.862167656 1598682.1393719339 1585205.0085040694 1535541.2398428144 1454130.4035299742 1404699.195111279 1558644.2000856164 0.9774308997525812 0.9452497821080988 0.9553350478995416 1.0399139598881015 1.0256876709156062 1.01704096959203 0.9851775278530321 0.9329456995060827 0.9012314645216135 1.0 20.571860203353683 -9.875198853730076 4.979916275876636 1.0000000558630016 0.9776879330544312 0.02810683311398532 0.04144902771824693 2.8701675405809313e-08 6.435682332583325e-09 0.044807860042413675 0.010867475136279735 1.3329109822906677e-10 9.875198853730076 -0.02231212280857031 RYS(ph)DHAGPAIPSVVAYPK ddPTM_KYSE-520_SHP099_60min_R1 4 RYSDHAGPAIPSVVAYPK 18 1 P27448-8;P27448-3;P27448-2;J3KNR0;P27448-6;P27448-4;P27448;H0YIY6;P27448-7 P27448-8 MARK3 MAP/microtubule affinity-regulating kinase 3 1 RYS(1)DHAGPAIPSVVAYPK;RYS(1)DHAGPAIPSVVAYPK;RYS(1)DHAGPAIPSVVAYPK;RYS(1)DHAGPAIPSVVAYPK 165.62 1.5067e-08 3187860000.0 3110160.0 3542660.0 2813300.0 2974410.0 2751830.0 2882650.0 3098250.0 2860520.0 3529890.0 3226750.0 True False 2937633.224849753 3372465.2959589297 2994649.8194391504 3257097.0321110236 2968383.3652290907 2864658.312085279 3411451.3460061015 2850597.523770385 2888950.957285575 3198163.5053735133 0.918537535655691 1.0545005876943305 0.9363654529881221 1.0184273026186719 0.9281524725804828 0.8957197802026434 1.0666907243091932 0.8913232606715846 0.9033155910983277 1.0 21.60881226747999 -5.778221144714491 24.990088815642014 0.9454669630074591 0.9838827742354471 0.06894586616604714 0.06153048498336975 650.4071174322006 968530.8677968705 0.018644006631861318 0.02119792922509771 1.6663984588424555e-06 5.778221144714491 0.038415811227987984 RYS(ph)DIFR ddPTM_KYSE-520_SHP099_60min_R1 1 RYSDIFR 7 1 Q9P107;Q9P107-2;K7ELE8 Q9P107 GMIP GEM-interacting protein 1 RYS(1)DIFR 99.568 0.004855 0.0 38952.0 37735.0 30384.0 41387.0 41285.0 54392.0 44606.0 41591.0 52493.0 52037.0 True False 36791.2549111131 35922.15395861026 32342.60125611888 45320.408036544715 44533.8946204827 54052.51935231201 49115.209792608126 41446.730528412365 42961.59444084424 51575.99266417339 0.7133407038943853 0.6964898221641622 0.6270863552100909 0.8787113091868024 0.8634617061169548 1.0480170435935963 0.9522882111530426 0.8036050958492325 0.8329765889447818 1.0 15.654412062949595 -5.35110390241038 4.84281694648984 0.911384138917799 0.6812511040923895 0.682632592265098 0.072768011300925 0.13877771450426163 5.487197767642604 0.022405179988838054 0.03396118093982169 4.455496405042201e-06 5.35110390241038 -0.23013303482540948 RYS(ph)DLTTLVAFPSSSVYPTK ddPTM_KYSE-520_SHP099_60min_R1 2 RYSDLTTLVAFPSSSVYPTK 20 1 J3KQ69;A0A499FHX9;P25205;P25205-2 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 RYS(0.997)DLT(0.003)T(0.001)LVAFPSSSVYPTK;RY(0.431)S(0.536)DLT(0.03)T(0.002)LVAFPSSSVYPTK 179.44 1.0136e-09 2757900000.0 1794370.0 1609350.0 1509910.0 1658450.0 1645840.0 1794640.0 1774670.0 1481690.0 1813860.0 1232020.0 True False 1694832.719112086 1532034.4103163998 1607241.2145414175 1816068.589368824 1775358.2444513808 1783438.986072093 1954070.962710127 1476550.3632190467 1484508.747689592 1221105.261297056 1.387949731140981 1.254629276340252 1.316218401052673 1.4872334490147057 1.4538945173044282 1.460512080815807 1.6002477629442986 1.2091917134569197 1.2157090750004216 1.0 20.219756137713194 -7.806824918052205 1.7826437459009792 1.0227730888044506 1.41452586640075 0.6255774627468785 0.10150783959229807 0.2287220326800606 1.4714994531407806 0.10263525171372088 0.030093021351539156 1.5601813492604094e-08 7.806824918052205 0.39175277759629945 RYS(ph)DLTTLVAFPSSSVYPTKDEENNPLETEYGLSVYK ddPTM_KYSE-520_SHP099_60min_R1 1 RYSDLTTLVAFPSSSVYPTKDEENNPLETEYGLSVYK 37 2 J3KQ69;A0A499FHX9;P25205;P25205-2 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 RY(0.352)S(0.387)DLT(0.129)T(0.129)LVAFPS(0.001)S(0.001)S(0.001)VYPTKDEENNPLETEYGLSVYK 64.936 0.010911 794940000.0 35183.0 37747.0 39591.0 44760.0 27051.0 25654.0 29399.0 27898.0 47074.0 22752.0 True False 33231.3288544283 35933.57746059787 42143.09920783973 49013.976942415306 29179.759800864183 25493.883870131885 32370.937826590292 27801.22834944216 38526.54823897096 22550.434980788163 1.4736446938934757 1.5934760234652448 1.868837529907673 2.173526895785946 1.2939776915932608 1.1305273664056323 1.4354906171064419 1.2328466556466608 1.7084614231075206 1.0 14.46086764179168 -5.803781733069322 24.99951436590032 1.310138263997313 1.7707694758373975 0.47603265869298594 0.2450719757364825 132.00721738816753 77938.17916051154 0.07755196263927548 0.08793635829983627 1.5711522327732011e-06 5.803781733069322 0.4606312118400846 RYS(ph)FRVPEEER ddPTM_KYSE-520_SHP099_60min_R1 2 RYSFRVPEEER 11 2 H0Y7V8;A0A0A0MRJ1;H0Y5V1;A0A0A0MRJ0;Q5VT25-3;Q5VT25-4;Q5VT25-5;Q5VT25;Q5VT25-2;Q5VT25-6;H0Y6R0 H0Y7V8 CDC42BPA Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase MRCK alpha 1 RYS(1)FRVPEEER;RYS(1)FRVPEEER 129.38 0.00011829 845310000.0 471570.0 487700.0 454480.0 471650.0 482740.0 421890.0 369810.0 422250.0 560150.0 392990.0 True False 445411.0720485105 464270.1599473759 483776.5079937109 516475.4741932566 520728.89158512343 419256.8280178506 407194.00379779376 420785.31330389134 458440.8802323916 389508.4143415935 1.1435210528157964 1.1919387177608372 1.2420181186880486 1.3259674378698139 1.336887400662034 1.076374251700165 1.0454048970574747 1.08029839102492 1.1769729827462605 1.0 18.571294968828425 -6.281359354095152 24.08417648512623 1.0789283967162873 1.2489401323457652 0.6219799504015413 0.06712141999788833 380.1867385892343 459661.52139454853 0.025488300704799426 0.022510671629989203 5.23167366064747e-07 6.281359354095152 0.1700117356294779 RYS(ph)GNMEYVISR ddPTM_KYSE-520_SHP099_60min_R1 3 RYSGNMEYVISR 12 1 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 RYS(1)GNMEYVISR;RYS(1)GNMEYVISR;RYS(0.999)GNMEYVIS(0.001)R 207.53 6.9562e-10 2110680000.0 952840.0 1055150.0 977680.0 989650.0 905300.0 1013680.0 1074300.0 1076700.0 1166410.0 1038190.0 True False 899984.0657605524 1004459.0101875596 1040702.817143308 1083706.0384508767 976541.9595476064 1007353.2471144955 1182900.7281576213 1072965.1790036685 954619.3468032904 1028992.4442995989 0.8746265055164149 0.9761578092745488 1.0113804264633643 1.0531720076803086 0.9490273373312339 0.9789704994385722 1.1495718308823761 1.0427337780249692 0.9277224066043247 1.0 19.97280095815322 -4.260584611768148 1.9595232234806692 1.0185687272387731 0.8306179366015712 0.3410789826112747 0.058293929835579086 0.9118308651298809 3.7139322084360824 0.016400762183901324 0.31044923551721976 5.488016244775608e-05 4.260584611768148 -0.18795079063720188 RYS(ph)PPIQR ddPTM_KYSE-520_SHP099_60min_R1 10 RYSPPIQR 8 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RY(0.071)S(0.929)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR;RYS(1)PPIQR 117.14 0.00064628 363572500000.0 3365410.0 3039260.0 2934880.0 2571430.0 2984640.0 3099170.0 2709190.0 2964080.0 3390860.0 2807840.0 True False 3178723.998521487 2893249.387577734 3124067.0607740316 2815817.9340713783 3219514.1877213875 3079826.9304512586 2983061.36434641 2953798.2983014723 2775165.3006244856 2782964.722066462 1.1422077949163358 1.0396284813231054 1.1225679707697795 1.0118051126356074 1.1568648938283235 1.1066712078780376 1.0719005313625998 1.0613854623741545 0.9971974414982216 1.0 21.408191189951168 -7.59201225037363 1.9299030679722784 0.9946695540571076 1.0927810975922194 0.4432093932926361 0.04184242515360604 0.3167381769494444 2.140195169851707 0.03579700848476356 0.011199552362807586 2.5585137165412374e-08 7.59201225037363 0.09811154353511187 RYS(ph)PS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 12 RYSPSPPPK 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RY(0.099)S(0.908)PS(0.993)PPPK;RY(0.044)S(0.961)PS(0.995)PPPK;RY(0.007)S(0.993)PS(1)PPPK;RY(0.016)S(0.984)PS(1)PPPK;RYS(1)PS(1)PPPK;RY(0.037)S(0.964)PS(0.999)PPPK;RYS(1)PS(1)PPPK;RYS(1)PS(1)PPPK;RY(0.002)S(0.998)PS(1)PPPK;RY(0.001)S(0.999)PS(1)PPPK;RY(0.01)S(0.992)PS(0.999)PPPK;RY(0.038)S(0.968)PS(0.994)PPPK 124.38 0.00076643 155668300000.0 51379600.0 47029100.0 43828100.0 43702400.0 44183900.0 45925400.0 42290200.0 44384600.0 54502300.0 42778800.0 True False 48529471.165306665 44769751.44388179 46653329.453439415 47855862.956394345 47660921.557997905 45638762.54343783 46565306.12857811 44230640.18204348 44606056.21117533 42399813.11340277 1.1445680440974935 1.0558950183138867 1.100319223781958 1.1286809880128197 1.1240832932570657 1.0763906534534045 1.098243192818664 1.043180074019288 1.052034264676397 1.0 25.337554570015076 -7.632206542199938 0.836913454815168 1.0028902633953736 1.107349832308396 0.6627534746022249 0.024846140578835486 0.3544442295380612 0.5102533912252604 0.023432850373337706 0.009113155702422862 2.3323485778298668e-08 7.632206542199938 0.10445956891302233 RYS(ph)PS(ph)PPPKR ddPTM_KYSE-520_SHP099_60min_R1 1 RYSPSPPPKR 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 RY(0.053)S(0.952)PS(0.996)PPPKR 53.001000000000005 0.038903 3736300000.0 3705800.0 3355400.0 3203700.0 3185800.0 3902600.0 3411100.0 3123000.0 3553900.0 4091200.0 3365800.0 True False 3500231.886670851 3194201.547441923 3410215.628101239 3488577.4741543033 4209712.4172434425 3389810.059616699 3438703.3175428207 3541572.3503864994 3348341.210759189 3335981.6305527743 1.0492359593991112 0.957499741062016 1.0222525198785835 1.045742411230317 1.2619111504357685 1.0161357090731358 1.0307920421531294 1.061628252970823 1.0037049305347543 1.0 21.669679913987032 -5.256586519479193 4.0780603557109325 1.06841172512058 1.0027170880011622 0.08345084421209692 0.07433275098947639 0.46913795640672246 18.85812136157989 0.02166628441123846 0.03642421683022871 5.538771903841427e-06 5.256586519479193 -0.06569463711941781 RYS(ph)PSPPPK ddPTM_KYSE-520_SHP099_60min_R1 5 RYSPSPPPK 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 RY(0.005)S(0.994)PS(0.001)PPPK;RYS(0.783)PS(0.217)PPPK;RYS(0.766)PS(0.234)PPPK;RY(0.005)S(0.987)PS(0.008)PPPK;RY(0.096)S(0.854)PS(0.049)PPPK 166.29 0.00011403 4259720000.0 4917380.0 4861090.0 4169470.0 3878290.0 3913800.0 4442200.0 4251980.0 3944710.0 5257050.0 4295420.0 True False 4644603.128845998 4627555.939755148 4438240.707587872 4246881.515549596 4221793.793524164 4414474.58204958 4681811.633725822 3931026.721712237 4302502.2394460235 4257365.920586196 1.0909569944146318 1.0869528309462253 1.0424851399610893 0.9975373493300393 0.9916445690303421 1.0369027855237194 1.0996967892957588 0.9233471576178199 1.0106019354929239 1.0 22.021529664406774 -4.913771516903139 2.8327738622739496 1.0097814832704235 1.0906844718315607 0.37683079693821653 0.04113816359951125 0.29069693211709613 4.664589409564045 0.01176290814825639 0.0293702310178558 1.2196310802413602e-05 4.913771516903139 0.0809029885611372 RYS(ph)VSER ddPTM_KYSE-520_SHP099_60min_R1 1 RYSVSER 7 1 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 RYS(0.992)VS(0.008)ER 51.276 0.051922 0.0 170760.0 176320.0 166170.0 138390.0 161940.0 178660.0 153360.0 179530.0 197130.0 191480.0 True False 161287.60239837924 167849.3225382843 176881.5840814004 151542.54399152915 174683.75668744004 177544.91666943784 168863.12544936512 178907.2523326169 161336.16124290146 189783.63616918575 0.8498498904014925 0.8844246317878126 0.9320170466315462 0.7985016361285967 0.9204363464282839 0.9355122509675308 0.8897665196952456 0.9426906130786064 0.8501057546345866 1.0 17.533996077779392 RYSDLT(ph)TLVAFPSSSVYPTK ddPTM_KYSE-520_SHP099_60min_R1 1 RYSDLTTLVAFPSSSVYPTK 20 1 J3KQ69;A0A499FHX9;P25205;P25205-2 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 RY(0.155)S(0.206)DLT(0.319)T(0.319)LVAFPSSSVYPTK 108.34 0.00025062 80824000.0 170460.0 154580.0 163700.0 157050.0 174380.0 175600.0 167550.0 151980.0 175530.0 131270.0 True False 161004.2439964146 147153.74477068966 174252.363929261 171975.98478119564 188102.71391352225 174504.01526448716 184487.58913041922 151452.8168523988 143658.1767512124 130107.04992651449 1.2374751720783084 1.1310205315838249 1.3392999382253317 1.3218037368330853 1.4457534316531209 1.3412341249997477 1.417967659973993 1.1640631075559746 1.1041536706300825 1.0 16.989339611884205 -7.623792722854864 2.3802286089931437 1.0309999282921567 1.3179663309441312 0.6084389112631654 0.0870341557580217 0.22244734426646923 2.3292512429623042 0.08437821355451626 0.0259479226661138 2.3779749597007126e-08 7.623792722854864 0.2869664026519745 RYSGNMEYVIS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 RYSGNMEYVISR 12 1 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 RYS(0.145)GNMEYVIS(0.855)R;RYS(0.439)GNMEYVIS(0.561)R 133.15 5.4653999999999995e-05 1524020000.0 939000.0 1028480.0 871870.0 932390.0 907460.0 939600.0 874610.0 958970.0 1085690.0 961910.0 True False 886911.7981499073 979070.2770200468 928072.1352413225 1021004.0652667234 978871.9392588886 933735.6078730761 963024.1141710294 955643.5568952813 888556.0640176812 953388.225754656 0.9302734963481123 1.0269376635578462 0.9734461892548604 1.0709216221529754 1.0267296289337546 0.9793865527697032 1.0101069933066837 1.0023655957559576 0.9319981514501536 1.0 19.862704282820843 -9.298464598953142 11.416692818289809 0.9999999999977811 0.9984234582458827 0.0 0.04131021040745484 0.0 0.0 0.03931395863136716 0.009535035529311174 5.029622626065505e-10 9.298464598953142 -0.0015765417518983638 RYSPPIQR ddPTM_KYSE-520_SHP099_60min_R1 5 RYSPPIQR 8 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 0 ;;;; 148.52 0.0011026 2789020000.0 965853.0 867488.0 754717.0 731021.0 845886.0 827052.0 741156.0 794095.0 925276.0 769940.0 False True 912275.2087097784 825812.5743539658 803367.2654098951 800497.0160505215 912452.4157670246 821890.0616886377 816079.2814655041 791340.4697881663 757269.2027098201 763118.930604256 1.1954561368139784 1.0821544863263548 1.0527418901451828 1.0489806817092961 1.1956883510208858 1.0770143797086063 1.069399865128903 1.036981836057407 0.9923344479348666 1.0 19.54154839024108 -7.249438192043207 1.4684109561711787 0.996105165961064 1.106410487578934 0.4665344784207419 0.04857943350443839 0.425608246394266 1.6465536835523107 0.04053877484189567 0.015724952686573774 5.630692466262423e-08 7.249438192043207 0.11030532161786999 RYWEEETVPTTAGAS(ph)PGPPR ddPTM_KYSE-520_SHP099_60min_R1 4 RYWEEETVPTTAGASPGPPR 20 1 O15213 O15213 WDR46 WD repeat-containing protein 46 1 RYWEEETVPTTAGAS(1)PGPPR;RYWEEETVPTTAGAS(1)PGPPR;RYWEEETVPTTAGAS(1)PGPPR;RYWEEETVPTTAGAS(1)PGPPR 209.16 8.280500000000001e-19 3561550000.0 1957280.0 1900320.0 1831370.0 1452410.0 1563820.0 1510560.0 1475630.0 1604030.0 2007890.0 1753330.0 True False 1848705.7766590544 1809025.7747615273 1949423.0404956047 1590446.6097170124 1686883.7370813428 1501132.03472622 1624801.0811609721 1598465.9943134172 1643307.7907878526 1737796.8602701006 1.0638215656412888 1.040988055692744 1.1217784339837118 0.9152085874236267 0.9707024886781965 0.863813296620241 0.9349775674634572 0.9198232721314575 0.9456270916109482 1.0 20.728828017524016 -5.2699952526832625 24.992472850106495 0.9308238929020037 1.0720752231554387 0.7317095282301098 0.038693983983248574 287.68313908117455 840347.603323286 0.010392211611715127 0.015686810221077225 5.370376667510104e-06 5.2699952526832625 0.14125133025343495 S(ph)ADFNPDFVFTEK ddPTM_KYSE-520_SHP099_60min_R1 5 SADFNPDFVFTEK 13 0 Q96GQ7;B7Z6D5;A0A087WYH5 Q96GQ7 DDX27 Probable ATP-dependent RNA helicase DDX27 1 S(1)ADFNPDFVFTEK;S(1)ADFNPDFVFTEK;S(1)ADFNPDFVFTEK;S(1)ADFNPDFVFTEK;S(1)ADFNPDFVFTEK 256.18 2.9113e-17 905444000.0 1791660.0 1682410.0 1665190.0 1480730.0 1570740.0 1549140.0 1568330.0 1638180.0 1947530.0 1651460.0 True False 1692273.0482143364 1601584.4982511068 1772530.8117982028 1621458.1340022904 1694348.3017119302 1539471.2426356955 1726872.1018257875 1632497.5359340848 1593907.6452360786 1636829.3492164381 1.033872620273115 0.9784676081338576 1.0829050766023507 0.9906091522482133 1.035140469910945 0.940520307369031 1.055010470488236 0.9973535339622136 0.9737775327642394 1.0 20.642472488037527 S(ph)ADLPHSFK ddPTM_KYSE-520_SHP099_60min_R1 3 SADLPHSFK 9 0 F8W1R0;B7Z493;E9PJX4;F8VWL3;Q96M96 F8W1R0 FGD4 FYVE, RhoGEF and PH domain-containing protein 4 1 S(1)ADLPHSFK;S(1)ADLPHSFK;S(1)ADLPHSFK 148.28 0.00025807 1138090000.0 2807620.0 2482360.0 2385020.0 2582110.0 2692330.0 2447320.0 2430670.0 2720960.0 3124520.0 2689390.0 True False 2651875.7217482915 2363103.699501673 2538762.205366922 2827512.9580603237 2904201.053737778 2432045.368092738 2676385.8446531575 2711521.62483684 2557185.9307394642 2665564.0969137596 0.9948647360679427 0.8865304354293034 0.9524296220474866 1.0607559433044853 1.0895258745045062 0.912394254900344 1.0040598339960864 1.017241201581418 0.9593413768215975 1.0 21.34600944328504 -5.021381727427964 23.418556332218245 1.0063985588081261 0.9353932005991008 0.2285114667480781 0.051965826113906606 444.1296888452193 486440.1027179308 0.01433236776169075 0.02520023494805027 9.519590623599712e-06 5.021381727427964 -0.07100535820902532 S(ph)ADNLSCPSPLNVMEPVTELMQEQSYLK ddPTM_KYSE-520_SHP099_60min_R1 1 SADNLSCPSPLNVMEPVTELMQEQSYLK 28 0 P28290-3;P28290;P28290-2;E7EUL7 P28290-3 SSFA2 Sperm-specific antigen 2 1 S(0.914)ADNLS(0.064)CPS(0.018)PLNVMEPVT(0.005)ELMQEQSYLK 45.276 0.048457 0.0 30938.0 25847.0 27494.0 16537.0 23793.0 19031.0 15734.0 27761.0 29512.0 26801.0 True False 29221.80746662601 24605.271322862034 29266.307231955398 18108.67150796966 25665.373736348436 18912.220469808984 17324.546269042192 27664.70357046611 24153.36473697819 26563.563990862473 1.1000710400410856 0.9262789937120611 1.1017462582213229 0.6817109147778065 0.9661871330660674 0.7119609581121926 0.6521920881927445 1.0414530060793956 0.9092667213362875 1.0 14.69716110330497 -5.242678054064871 24.88144240568504 0.8441710578068801 1.0310567901562424 0.29170015889484957 0.1355711298793405 1041.0233298600174 1380612.7227176258 0.036892192137874556 0.06375545658463672 5.719024353694421e-06 5.242678054064871 0.18688573234936234 S(ph)AEEGELAESK ddPTM_KYSE-520_SHP099_60min_R1 5 SAEEGELAESK 11 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(1)AEEGELAESK;S(1)AEEGELAESK;S(1)AEEGELAESK;S(1)AEEGELAESK;S(1)AEEGELAESK 188.26 9.084899999999999e-07 5575440000.0 8823210.0 7689220.0 6896600.0 7703860.0 7785710.0 8022860.0 8493410.0 9980740.0 10142480.0 8750270.0 True False 8333768.952666924 7319818.329445471 7341165.870950156 8436032.538150024 8398401.082369832 7972786.354811187 9352006.770493556 9946119.142462231 8300861.303114215 8672749.415407043 0.9609143022006466 0.8440020550394198 0.8464635053226208 0.9727056708410721 0.9683666251731159 0.919291677060059 1.0783208787146346 1.1468242267893802 0.9571199288160945 1.0 23.048057995201553 -6.22501616224034 1.0676782080276834 1.0522184264303822 0.8905359215750159 0.4364372790320502 0.0662425595195901 0.44197739015695436 1.0574228797819842 0.03641836704674805 0.03410429770021582 5.956399764143214e-07 6.22501616224034 -0.16168250485536628 S(ph)AEPAEALVLACK ddPTM_KYSE-520_SHP099_60min_R1 3 SAEPAEALVLACK 13 0 Q96CW6 Q96CW6 SLC7A6OS Probable RNA polymerase II nuclear localization protein SLC7A6OS 1 S(1)AEPAEALVLACK;S(1)AEPAEALVLACK;S(1)AEPAEALVLACK 236.92 8.9071e-16 432830000.0 946045.0 862088.0 788993.0 749836.0 805989.0 911717.0 812996.0 1015193.0 1088084.0 945395.0 True False 893565.9979560482 820671.9984595306 839852.7512134345 821100.1879935856 869415.7488499032 906026.6360187506 895181.5697563374 1011671.5324308267 890515.3739655107 937019.5358061803 0.9536257930708498 0.8758323248334965 0.8963022851928624 0.8762892945312377 0.9278523185772076 0.9669239555813909 0.9553499532815536 1.079669626696116 0.9503701256338707 1.0 19.83771960120803 -6.477566352388572 1.4409051379201017 1.0078380792883654 0.8988802675037051 0.5664579671087161 0.038347498090074005 0.27483266966610753 1.1545028809042732 0.018644417818097236 0.014134193141119434 3.329918832493062e-07 6.477566352388572 -0.10895781178466035 S(ph)AEPS(ph)PTVMSTSLGSNLSELDR ddPTM_KYSE-520_SHP099_60min_R1 1 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 2 S(0.997)AEPS(0.502)PT(0.502)VMSTSLGSNLSELDR 140.63 7.331699999999999e-07 83125000.0 27411.0 27568.0 25693.0 24000.0 28716.0 23744.0 35511.0 31202.0 36682.0 32738.0 True False 25890.457187526205 26243.591899588373 27349.211890253493 26280.95278413688 30975.785828310076 23595.80488861039 39100.79843396194 31093.76754460155 30021.4734779694 32447.96678977859 0.7979069183367735 0.8087900258778417 0.8428636551387481 0.8099414349874033 0.9546294850766346 0.7271890113017278 1.2050307708734174 0.9582655130920675 0.9252189412196526 1.0 14.985840460417842 -6.744789622828066 24.999920177479808 1.0186510114612637 0.8290993836927641 0.5554787793274045 0.08691767739145771 186.97896218448037 280752.46209061093 0.032628368309703636 0.02520229941586842 1.7997425196897962e-07 6.744789622828066 -0.18955162776849954 S(ph)AEPSPTVMSTSLGSNLSELDR ddPTM_KYSE-520_SHP099_60min_R1 5 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 S(0.6)AEPS(0.316)PT(0.081)VMS(0.001)T(0.001)SLGSNLSELDR;S(0.999)AEPS(0.001)PTVMSTSLGSNLSELDR;S(0.868)AEPS(0.132)PTVMSTSLGSNLSELDR;S(1)AEPSPTVMSTSLGSNLSELDR;S(0.912)AEPS(0.085)PT(0.003)VMSTSLGSNLSELDR 309.83 3.9786000000000004e-54 2702233000.0 703554.0 726960.0 612206.0 597014.0 567325.0 679631.0 600815.0 757352.0 923410.0 789809.0 True False 664526.4571198727 692035.7504107936 651669.7783242335 653754.0310611965 611970.2498623068 675389.1708326818 661551.243589334 754724.922679285 755742.021271789 782811.9067221048 0.8488967163292995 0.8840383551504456 0.8324730024265891 0.8351355229108397 0.7817589954971825 0.8627732473574171 0.845096041473705 0.9641203923935837 0.9654196810014471 1.0 19.578306174241966 -7.284361186334161 3.4630538637802495 0.9789720301398839 0.8399441212990943 0.8520152669180957 0.02585022338811414 0.09411764639168452 2.3894209656697702 0.016247292814692543 0.007545050713068671 5.195637152641818e-08 7.284361186334161 -0.13902790884078953 S(ph)AFQHLPELR ddPTM_KYSE-520_SHP099_60min_R1 1 SAFQHLPELR 10 0 O75473-3;O75473-2;O75473 O75473-3 LGR5 Leucine-rich repeat-containing G-protein coupled receptor 5 1 S(1)AFQHLPELR 51.013000000000005 0.049791 299060000.0 319100.0 304130.0 278110.0 249590.0 281090.0 324390.0 277000.0 285100.0 342870.0 252060.0 True False 301398.8868899207 289519.1382915633 296037.4155917332 273310.95855803014 303210.1838166763 322365.3616836388 305001.86325948156 284111.05464284023 280613.451049326 249826.94449971284 1.2064306654091392 1.1588787545368073 1.1849699246194538 1.0940011258807365 1.2136808718685859 1.2903546586185357 1.2208525540359885 1.137231435191198 1.1232313296360574 1.0 17.9305695582673 -8.056277853900308 1.5382187069334115 1.0019945269850592 1.1924268000837794 0.5948378945752577 0.048516266732485366 0.35353353905357854 1.856680864286732 0.05093147778667948 0.014924145683913231 8.784603136912212e-09 8.056277853900308 0.19043227309872024 S(ph)AGEEEDGPVLTDEQK ddPTM_KYSE-520_SHP099_60min_R1 8 SAGEEEDGPVLTDEQK 16 0 Q66PJ3-4;Q66PJ3-3;H7BZV4;A0A0C4DG62;F5H7X4;Q66PJ3-7;Q66PJ3;Q66PJ3-2;F5GYV5;F8WCT1 Q66PJ3-4;Q66PJ3 ARL6IP4 ADP-ribosylation factor-like protein 6-interacting protein 4 1 S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK;S(1)AGEEEDGPVLTDEQK 455.07 3.574999999999999e-136 12533160000.0 11341380.0 10539750.0 9335520.0 9157290.0 9718100.0 10125550.0 9792770.0 10501920.0 12245890.0 10313960.0 True False 10712251.042919481 10033404.589512717 9937302.556560125 10027596.088360365 10482859.18157472 10062352.68656794 10782718.75982511 10465491.290686542 10022345.069765305 10222586.338539463 1.0479002757388283 0.9814937489631635 0.9720927979934189 0.980925546263769 1.0254605668678993 0.9843255271547635 1.0547936111993432 1.0237615945811405 0.9804118779589817 1.0 23.285256911928514 -5.761417174144068 24.999999999890296 1.0134570129517966 0.99291597581765 0.06583484446169396 0.027949626801572414 1.4134663754483132 1588217.4050756057 0.008567008706836854 0.0103571316765134 1.732139341748691e-06 5.761417174144068 -0.020541037134146567 S(ph)AGNIPLS(ph)PLAR ddPTM_KYSE-520_SHP099_60min_R1 3 SAGNIPLSPLAR 12 0 O15021;O15021-2;O15021-3;O15021-6;H7C1I9 O15021 MAST4 Microtubule-associated serine/threonine-protein kinase 4 2 S(1)AGNIPLS(1)PLAR;S(1)AGNIPLS(1)PLAR;S(1)AGNIPLS(1)PLAR 161.19 3.8407e-06 512420000.0 1176690.0 1054070.0 908840.0 1048460.0 986710.0 1055900.0 1131740.0 1137840.0 1335630.0 1274820.0 True False 1111416.6600266406 1003430.8950086739 967425.2805954156 1148105.3231690058 1064358.463388069 1049309.7364337817 1246147.3239180006 1133893.0986138533 1093113.2604923462 1263526.0865949506 0.8796151277111924 0.7941513085121956 0.7656551699716064 0.9086518555885222 0.8423715779833132 0.8304614740970991 0.9862458220203559 0.8974037897939706 0.8651291588590416 1.0 20.269024019608178 -7.551740358629383 0.21298055496552373 1.0326812538376222 0.7786879326459308 0.4461417960553071 0.053280958437914604 2.440667070139273 0.5388967316925929 0.2515632856764289 0.22975178239259703 2.8071113576702832e-08 7.551740358629383 -0.2539933211916914 S(ph)AGNIPLSPLAR ddPTM_KYSE-520_SHP099_60min_R1 2 SAGNIPLSPLAR 12 0 O15021;O15021-2;O15021-3;O15021-6;H7C1I9 O15021 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 S(1)AGNIPLSPLAR;S(1)AGNIPLSPLAR 167.09 2.7044999999999997e-06 4541900000.0 783390.0 873700.0 670050.0 638660.0 692910.0 530110.0 571650.0 561500.0 793590.0 787180.0 True False 739933.7950507522 831726.1405495635 713242.4951179054 699358.0543798691 747438.0748814011 526801.3868556793 629437.9607663631 559552.2875550853 649494.0607759058 780206.1976167719 0.9483823600875816 1.0660337524748777 0.9141717885561347 0.8963759279484544 0.9580006890031575 0.6752078982003139 0.8067584731947177 0.7171851354991808 0.8324646263511607 1.0 19.573495932983175 -6.231570809666645 23.4752557773029 0.7886745106331503 0.9569709022679165 0.39994165228695666 0.09075324785146781 295.8988083525715 232561.87088349526 0.02877589950742291 0.028770399126343247 5.867177002663691e-07 6.231570809666645 0.16829639163476617 S(ph)AGTATQMR ddPTM_KYSE-520_SHP099_60min_R1 2 SAGTATQMR 9 0 Q92934;F5H1R6 Q92934 BAD Bcl2-associated agonist of cell death 1 S(1)AGTATQMR;S(0.995)AGT(0.002)AT(0.003)QMR 109.39 0.00097852 2818000000.0 1189420.0 947950.0 875320.0 707740.0 763540.0 894350.0 781780.0 701940.0 973070.0 845510.0 True False 1123440.5015500132 902409.0590980407 931744.527761519 775003.3968102095 823626.2540516739 888768.0299077131 860809.9518375378 699505.1339740274 796385.0170985141 838019.4391968257 1.3405900257239147 1.0768354728894203 1.1118411867086535 0.9248036030679526 0.9828247598182848 1.0605577726926307 1.0271956849384722 0.8347123005218672 0.9503180712153708 1.0 19.676624184360943 -1.000000022423927 0.6532166885734909 0.9619100032161387 34.80035821497318 0.7375918424445201 0.06579438956266333 118.05933358861485 0.7526415028449167 0.028674089632662835 5780.757764875409 0.09999999483670015 1.000000022423927 33.83844821175704 S(ph)AKPETVIDSLLQ ddPTM_KYSE-520_SHP099_60min_R1 6 SAKPETVIDSLLQ 13 1 H7C2F6;J3KPF9;A0A087X011;E9PES4;Q9Y496 H7C2F6 KIF3A Kinesin-like protein;Kinesin-like protein KIF3A 1 S(1)AKPETVIDSLLQ;S(1)AKPETVIDSLLQ;S(1)AKPETVIDSLLQ;S(0.997)AKPET(0.003)VIDSLLQ;S(0.999)AKPET(0.001)VIDSLLQ;S(1)AKPETVIDSLLQ 120.63 0.00015375 995962000.0 2824020.0 2830210.0 2380350.0 1665700.0 1732340.0 2509930.0 2011910.0 2209360.0 2730260.0 2813620.0 True False 2667365.9810556965 2694242.463368179 2533791.169694661 1824007.6271890334 1868665.3023337047 2494264.5958587425 2215293.4971493986 2201696.245828498 2234513.6082536587 2788693.515763237 0.9564930552526728 0.9661307161001491 0.9085943490642744 0.6540724596943817 0.6700862937325223 0.8944204810459738 0.7943839954542639 0.7895081454391794 0.8012761515824356 1.0 21.411157956689678 -5.02006613693689 20.276868968102605 0.7893194141940596 0.955324989122858 0.33258801219918055 0.09392954621566717 66.6191343397179 67321.53236948953 0.025234562247700692 0.04477160649582203 9.548471651651809e-06 5.02006613693689 0.16600557492879842 S(ph)ALAAAILATTLTGR ddPTM_KYSE-520_SHP099_60min_R1 2 SALAAAILATTLTGR 15 0 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 S(1)ALAAAILATTLTGR;S(1)ALAAAILATTLTGR 150.39 5.2842999999999995e-06 620410000.0 69956.0 68083.0 39716.0 42418.0 59210.0 55332.0 32311.9 50149.0 82144.0 46877.0 True False 66075.40122617141 64812.19048533352 42276.15690784683 46449.39396656324 63869.49014118397 54986.65246363675 35578.302185754714 49975.044823864606 67228.72028172732 46461.70624975411 1.422147539545453 1.3949593270840441 0.9099139984354442 0.9997350014843475 1.374669492288006 1.1834832790697984 0.7657553942273269 1.0756179412616618 1.4469705421565984 1.0 15.503754515892869 -4.689126688648774 9.481751907118863 1.0954254511095427 1.4114565220921513 0.2982432204122929 0.19271304847260487 0.435858777914331 53.01449309213138 0.05086112134401388 0.13485159660986146 2.045847752569894e-05 4.689126688648774 0.31603107098260863 S(ph)ALEDKER ddPTM_KYSE-520_SHP099_60min_R1 1 SALEDKER 8 1 P50579-3;P50579;G3V1U3;F8VQZ7;P50579-2;F8VSC4 P50579-3 METAP2 Methionine aminopeptidase 2 1 S(1)ALEDKER 54.538999999999994 0.045619 206310000.0 523620.0 423480.0 420820.0 452120.0 431150.0 451970.0 513490.0 502850.0 472610.0 471130.0 True False 494573.754789409 403135.3851435604 447946.73053580656 495089.34886516526 465079.05209206976 449149.08758024126 565398.5803794627 501105.7307160728 386795.9375285731 466956.15473359363 1.0591438827304283 0.863325991224071 0.9592907727950769 1.060248042233477 0.9959801308484845 0.9618656548953475 1.2108172783417581 1.0731322965471182 0.828334595459496 1.0 18.832927567587966 -5.166606860338384 6.757343619679336 1.0262538405756563 0.949664215078255 0.058806601513531453 0.10090588218950215 0.622613845874134 37.85492112925282 0.02775015051974704 0.04849875188351676 6.813858956767293e-06 5.166606860338384 -0.07658962549740123 S(ph)ALSSSLR ddPTM_KYSE-520_SHP099_60min_R1 1 SALSSSLR 8 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;A0A3B3IU98;A0A0C4DGT3;Q6DN90-2 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 S(0.961)ALS(0.03)S(0.005)S(0.005)LR 78.516 0.020030000000000003 292600000.0 768050.0 769780.0 731000.0 643700.0 712880.0 777490.0 742730.0 800230.0 851320.0 779440.0 True False 725444.7354302829 732798.613336663 778121.4296413537 704877.0544645388 768979.6002676436 772637.3965147288 817812.396746263 797454.1889050864 696741.7480307758 772534.767995144 0.9390447724610925 0.9485639270817507 1.0072315989877167 0.9124211409847764 0.9953980482500138 1.0001328464735006 1.0586091793235688 1.0322566982643544 0.9018904739251236 1.0 19.559240337532064 -5.971207999788638 23.895100304827128 1.0036146963667565 0.955337385381293 0.2065213373659356 0.04366223377322249 204.7525673176285 169926.81480516552 0.013659759187939201 0.01548837220151054 1.0685429916494064e-06 5.971207999788638 -0.048277310985463506 S(ph)APAS(ph)PVQSPAK ddPTM_KYSE-520_SHP099_60min_R1 3 SAPASPVQSPAK 12 0 P35612 P35612 ADD2 Beta-adducin 2 S(1)APAS(1)PVQSPAK;S(1)APAS(0.999)PVQS(0.001)PAK;S(1)APAS(1)PVQSPAK 199.8 4.0147e-08 1246070000.0 2614020.0 2184440.0 2114730.0 2335640.0 2371920.0 2354070.0 2346700.0 2508820.0 2570780.0 2506650.0 True False 2469015.0996803213 2079496.2234887134 2251048.879487633 2557618.5233642296 2558576.6096212976 2339377.3759320728 2583927.33758493 2500117.4889829927 2103991.156090022 2484443.0311441873 0.9937901850553761 0.8370070061662958 0.9060577567161735 1.0294534796341626 1.0298391138568264 0.9416103917885749 1.0400429010420602 1.006309042969517 0.8468663316948943 1.0 21.244491030259063 -5.238816250604394 22.26451499132542 0.9875068761544017 0.9047571012671007 0.20830148280201366 0.06420753756201251 279.1494252460803 274721.3347256935 0.017124571030320546 0.02961283687230098 5.770105441179628e-06 5.238816250604394 -0.08274977488730095 S(ph)APASPT(ph)HPGLMSPR ddPTM_KYSE-520_SHP099_60min_R1 1 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.989)APAS(0.155)PT(0.805)HPGLMS(0.051)PR 76.44800000000001 0.0080372 0.0 307920.0 306520.0 305010.0 353800.0 310330.0 274550.0 298360.0 289910.0 358850.0 287510.0 True False 290839.0637766978 291794.31910409994 324671.43263325474 387425.04562615167 334751.2054638345 272836.43161084875 328521.1405129927 288904.369875503 293691.88587234437 284962.8850793955 1.020620856276301 1.023973065905762 1.1393463838029145 1.3595631779142343 1.1747186142173116 0.9574454986825105 1.1528558900625292 1.0138315724695492 1.030632062103515 1.0 18.120414502490476 -6.241616022379645 24.80521134659242 1.0394364021069071 1.148752723624415 0.23984813160564944 0.09953207644501408 1286.4182646995835 1609712.6961946837 0.03615776425349211 0.03610490208556477 5.733026874692455e-07 6.241616022379645 0.10931632151750792 S(ph)APASPTHPGLMS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.803)APAS(0.304)PT(0.342)HPGLMS(0.55)PR 80.535 0.0088885 622950000.0 572980.0 655460.0 540710.0 538470.0 493360.0 583250.0 488620.0 578520.0 695690.0 551400.0 True False 541195.6571926877 623970.7177344818 575565.0317665894 589646.0269030911 532184.6251655895 579609.7204043973 538014.4780716537 576513.2491475829 569370.2329177405 546515.0249827083 0.9902667492258079 1.1417265568393553 1.0531550011544517 1.0789200661441056 0.9737785803463095 1.0605558747863084 0.9844459044628764 1.0548900264285026 1.041819907761466 1.0 19.05990163395718 -5.719861010510488 24.998701930925765 1.022318029017986 1.0705062428815881 0.21137092939069735 0.043674293406077584 218.21951857821608 131201.77282350583 0.012116095730504681 0.015641604049994557 1.9060706299168326e-06 5.719861010510488 0.04818821386360206 S(ph)APATGGVK ddPTM_KYSE-520_SHP099_60min_R1 2 SAPATGGVK 9 0 Q71DI3;P68431;Q16695;Q5TEC6 Q71DI3;Q5TEC6 HIST2H3A;HIST1H3A;HIST3H3;HIST2H3PS2 Histone H3.2;Histone H3.1;Histone H3.1t;Histone H3 1 S(1)APATGGVK;S(0.999)APAT(0.001)GGVK 136.49 0.00047167 1341330000.0 1088220.0 3115300.0 1645010.0 3151900.0 3319700.0 2204400.0 2877900.0 1462960.0 2982300.0 2290800.0 True False 1027854.2672872123 2965636.311839367 1751049.976709061 3451455.6283467095 3580941.5034907702 2190641.5219193404 3168826.2175973393 1457885.33321743 2440789.4976650197 2270505.294215429 0.452698467563973 1.3061569684047531 0.771215984904424 1.5201266595325675 1.577156200698559 0.9648255511671531 1.3956480197031753 0.6420973062391386 1.0749983732182542 1.0 21.11458197007208 -7.259597887583752 24.996157779914782 0.8939108928991745 1.1578063367992169 0.08831587296755261 0.34307949864384313 385.3960852339657 5231407.899182457 0.16906487341130202 0.09122940325414437 5.5004992831396923e-08 7.259597887583752 0.2638954439000424 S(ph)APDLK ddPTM_KYSE-520_SHP099_60min_R1 2 SAPDLK 6 0 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 S(1)APDLK;S(1)APDLK 86.833 0.027687 1433860000.0 5796700.0 4471800.0 4233600.0 4185600.0 4503200.0 4714300.0 4665200.0 4866200.0 5187000.0 4616300.0 True False 5475145.495565037 4256968.015691351 4506504.629999501 4583398.16555347 4857576.2202969 4684876.305019209 5136803.943964387 4849320.287979619 4245171.553629228 4575403.173427055 1.1966476588038164 0.9304028201088146 0.9849415361191115 1.0017473852736845 1.0616717338722508 1.023926444827409 1.1226997379810868 1.0598673175171567 0.9278245856636765 1.0 22.125467445109052 -7.753043842303842 24.988820732939296 0.9639122863984102 1.042370123331339 0.17654934077636353 0.0716678858066596 299.7590213213576 892233.9732679115 0.049845361350692195 0.018145820764501115 1.7658595470448282e-08 7.753043842303842 0.07845783693292874 S(ph)APPNLWAAQR ddPTM_KYSE-520_SHP099_60min_R1 13 SAPPNLWAAQR 11 0 Q92934;F5H1R6;F5H3B1 Q92934 BAD Bcl2-associated agonist of cell death 1 S(1)APPNLWAAQR;S(1)APPNLWAAQR;S(1)APPNLWAAQR;S(1)APPNLWAAQR;S(1)APPNLWAAQR;S(1)APPNLWAAQR;S(1)APPNLWAAQR;S(1)APPNLWAAQR;S(1)APPNLWAAQR;S(1)APPNLWAAQR;S(1)APPNLWAAQR;S(1)APPNLWAAQR;S(1)APPNLWAAQR 195.72 5.6073e-07 38326080000.0 2223962.0 2169124.0 2088468.0 2273573.0 2298942.0 2189717.0 2121930.0 2145396.0 2541979.0 2131416.0 True False 2100594.3945016665 2064916.0271184994 2223093.988946947 2489652.694345352 2479855.6562093194 2176050.1639687223 2336435.3924411256 2137954.12201519 2080419.6916758977 2112533.3124565547 0.994348530324 0.9774596286566086 1.0523355896157807 1.1785152355539732 1.173877657496262 1.0300666745171025 1.1059874789497197 1.0120333295615938 0.9847985257362338 1.0 21.01054266070098 -9.765579607623224 9.676519045108593 1.0000000180583974 1.0605453983995548 0.052819119593564445 0.07014178476678702 0.0 0.0 0.07505964660246284 0.018204638303734595 1.7156172029564281e-10 9.765579607623224 0.06054538034115731 S(ph)APPRGS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 SAPPRGSPPR 10 1 Q7Z6P3 Q7Z6P3 RAB44 Ras-related protein Rab-44 2 S(1)APPRGS(1)PPR;S(1)APPRGS(1)PPR 72.643 0.014081 1213810000.0 2280300.0 1912590.0 2011130.0 2241290.0 2038900.0 2045490.0 2240620.0 2168060.0 2532000.0 1980670.0 True False 2153807.213334647 1820706.3055438811 2140770.657721775 2454301.527731591 2199349.830245904 2032723.3381740116 2467123.7359438986 2160539.505889007 2072252.6265257779 1963122.8047379404 1.0971332043703508 0.9274541058509732 1.09049248093654 1.2502027493176713 1.1203322710825 1.035453988547274 1.2567342857968775 1.1005625835911064 1.0555899108932236 1.0 20.9047189939086 -4.986417588920583 24.410886077478164 1.1273232974122454 1.0114634762340808 0.17514012399511747 0.08763864513870624 250.24491228498113 449742.03660656756 0.02222695584491364 0.046229193085960366 1.0317688477971642e-05 4.986417588920583 -0.11585982117816451 S(ph)APSFRPK ddPTM_KYSE-520_SHP099_60min_R1 1 SAPSFRPK 8 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.984)APS(0.016)FRPK 90.82700000000001 0.0028046 611140000.0 243950.0 403280.0 412580.0 426970.0 481930.0 264870.0 343840.0 355460.0 391220.0 386530.0 True False 230417.60719773182 383905.8234643794 439175.56695134024 467549.1004267885 519855.14919339324 263216.8480814621 378598.7027550189 354226.9922249875 320184.30985363916 383105.6449157891 0.6014466512190918 1.0020886629033259 1.1463562930477726 1.2204181969951422 1.3569498546743242 0.6870607404892718 0.9882357719846158 0.9246196106111946 0.835759833097785 1.0 18.54738275791726 -6.277448345663493 24.99694536768171 0.8887427299466334 1.0750357016716263 0.16415523005756127 0.20058744256378527 1615.7728659567856 2522914.48660505 0.07422203231581749 0.06567639281199576 5.278999906835935e-07 6.277448345663493 0.18629297172499293 S(ph)APSLILDK ddPTM_KYSE-520_SHP099_60min_R1 2 SAPSLILDK 9 0 Q9P2F6-4;Q9P2F6-2;Q9P2F6-3;Q9P2F6 Q9P2F6-4 ARHGAP20 Rho GTPase-activating protein 20 1 S(1)APSLILDK;S(1)APSLILDK 169.21 9.0537e-05 299880000.0 382440.0 386000.0 345420.0 336090.0 346270.0 338410.0 351310.0 344230.0 393840.0 404320.0 True False 361225.29082476074 367455.9806021881 367686.3258915409 368031.892550857 373519.47899320646 336297.85766318464 386823.8432551931 343035.9464738858 322328.5838984645 400738.03935620014 0.9014000552707249 0.9169480920566442 0.9175228947125709 0.9183852202853346 0.9320789201675956 0.8391962445178877 0.9652785741943523 0.8560104426946471 0.8043373781443279 1.0 18.6122999360044 S(ph)AS(ph)LRR ddPTM_KYSE-520_SHP099_60min_R1 1 SASLRR 6 1 Q16629;C9JAB2;Q16629-4;H7BZZ6;H7C1N1 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 2 S(1)AS(1)LRR 51.949 0.059622 1344200000.0 187400.0 100200.0 169800.0 147890.0 124000.0 147790.0 165830.0 88433.0 129040.0 153530.0 True False 177004.54842736173 95386.24159673361 180745.5796896057 161945.42113525022 133758.0945365109 146867.58779008288 182593.71474483688 88126.24656341737 105609.58883368333 152169.8436445327 1.1632038529318771 0.626840636174635 1.1877884300901673 1.0642412271484827 0.8790052702490024 0.9651556725862462 1.199933642380379 0.5791308215396438 0.6940244289163254 1.0 17.215322954597877 -7.268216900738304 24.98615868129017 0.7274332263417439 0.9992899019888404 0.2693051390124648 0.18937542375317484 677.6015954743951 2498043.5444083386 0.09692517590282844 0.04821287285654572 5.392412407010994e-08 7.268216900738304 0.2718566756470965 S(ph)AS(ph)PERMD ddPTM_KYSE-520_SHP099_60min_R1 7 SASPERMD 8 1 Q16629;C9JAB2;Q16629-4;H7BZZ6 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 2 S(1)AS(1)PERMD;S(1)AS(1)PERMD;S(1)AS(1)PERMD;S(1)AS(1)PERMD;S(1)AS(1)PERMD;S(1)AS(1)PERMD;S(1)AS(1)PERMD 102.52 0.010541 13632787000.0 15758620.0 15121730.0 13692550.0 13433000.0 13597420.0 13982493.0 13860270.0 13126180.0 16621910.0 13917820.0 True False 14884457.934569843 14395259.39262054 14575193.681854602 14709668.281221284 14667459.595263252 13895223.074644567 15261401.354799617 13080648.345253427 13603790.148252416 13794518.942700123 1.0790124683866922 1.0435492134532405 1.056593110814321 1.0663415188541565 1.0632817031307262 1.0073003003847216 1.106338062109498 0.9482496924748167 0.9861735813158865 1.0 23.717591810566944 -7.270636554226801 24.988834612486688 0.975408725067307 1.057858268886884 0.6648681551949218 0.026683060431577657 379.07375175370106 1029941.4782493896 0.01342978574551812 0.006595240647228563 5.362452345594039e-08 7.270636554226801 0.08244954381957703 S(ph)AS(ph)PHDVDLCLVSPCEFEHR ddPTM_KYSE-520_SHP099_60min_R1 8 SASPHDVDLCLVSPCEFEHR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 2 S(1)AS(1)PHDVDLCLVSPCEFEHR;S(1)AS(1)PHDVDLCLVSPCEFEHR;S(1)AS(1)PHDVDLCLVSPCEFEHR;S(1)AS(1)PHDVDLCLVSPCEFEHR;S(1)AS(1)PHDVDLCLVSPCEFEHR;S(1)AS(1)PHDVDLCLVSPCEFEHR;S(1)AS(1)PHDVDLCLVSPCEFEHR;S(1)AS(1)PHDVDLCLVSPCEFEHR 205.63 4.6517000000000004e-14 2305603000.0 869077.0 816592.0 771150.0 881474.0 818683.0 833031.0 721754.0 877074.0 1060537.0 811589.0 True False 820867.5663479529 777361.6945904195 820859.5628836259 965249.023935177 883108.694430923 827831.7445318392 794715.937960231 874031.6350046098 867970.2147621516 804398.9528666885 1.0204731910982408 0.9663882477967997 1.0204632414777215 1.1999630537748176 1.097849134790307 1.0291308082657762 0.9879624222881574 1.0865648592526964 1.079029518460846 1.0 19.61755167804052 -5.011131897653667 24.92135709450589 1.0716704956413008 0.9934294532754365 0.2267044112767561 0.05730289342218155 738.7520500844364 1653882.150430522 0.016217724425808364 0.030464335012511404 9.746935728931583e-06 5.011131897653667 -0.07824104236586427 S(ph)AS(ph)PHDVDLCLVSPCEFEHRK ddPTM_KYSE-520_SHP099_60min_R1 3 SASPHDVDLCLVSPCEFEHRK 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 2 S(1)AS(1)PHDVDLCLVSPCEFEHRK;S(1)AS(1)PHDVDLCLVSPCEFEHRK;S(1)AS(1)PHDVDLCLVSPCEFEHRK 152.35 2.7778000000000004e-07 2179660000.0 652170.0 706020.0 739340.0 662480.0 576180.0 485690.0 390402.0 511540.0 818090.0 479660.0 True False 615992.830031337 672101.7394423743 786999.0393858259 725441.900018125 621522.0879842486 482658.6285524416 429867.6441163475 509765.5871343335 669545.4783706458 475410.5855698334 1.2957070135344164 1.4137290162287495 1.6554091626767595 1.525927108140852 1.3073375033062928 1.0152458594793816 0.9042029293502214 1.0722638548809797 1.408352061761771 1.0 18.858814501358474 -6.04027931548442 3.585944196806355 1.0755343098580172 1.4790509426261567 0.6070554448255396 0.14907546160136684 0.17037179307384018 4.51868654851896 0.05355065382369508 0.056330588101437984 9.114244702901159e-07 6.04027931548442 0.4035166327681394 S(ph)AS(ph)PPPATSSSSSSR ddPTM_KYSE-520_SHP099_60min_R1 5 SASPPPATSSSSSSR 15 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 S(0.999)AS(0.674)PPPAT(0.304)S(0.01)S(0.002)SS(0.003)S(0.002)S(0.006)R;S(1)AS(0.997)PPPAT(0.002)SSSSSSR;S(1)AS(0.872)PPPAT(0.102)S(0.021)S(0.004)S(0.001)SSSR;S(1)AS(0.976)PPPAT(0.016)S(0.004)S(0.001)S(0.001)S(0.001)S(0.001)S(0.001)R;S(1)AS(1)PPPATSSSSSSR 151.38 4.8965e-06 2373760000.0 988980.0 848930.0 823870.0 839290.0 816490.0 848360.0 784950.0 853590.0 1010170.0 866420.0 True False 934119.3079172485 808146.1285300911 876977.9784386078 919055.8692582595 880743.1178073853 843065.0705568356 864300.4063737562 850629.0955194031 826748.5923134057 858744.1928645604 1.0877736532939515 0.9410790026239519 1.0212330816622164 1.0702324125098466 1.0256175530799712 0.9817418010648514 1.0064701613767677 0.9905500410802345 0.9627414067926034 1.0 19.71186891238056 -6.2535896403829945 22.923662499570522 0.9888456517484924 1.0261306517484896 0.22569460325969548 0.037646648970611436 338.071051033276 987270.8963127295 0.012625437315865837 0.012376936865355943 5.577124758344582e-07 6.2535896403829945 0.03728499999999724 S(ph)AS(ph)PSVGEERPR ddPTM_KYSE-520_SHP099_60min_R1 2 SASPSVGEERPR 12 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 2 S(0.993)AS(0.562)PS(0.445)VGEERPR;S(0.991)AS(0.865)PS(0.143)VGEERPR 121.56 0.0027746 376530000.0 924360.0 846370.0 753900.0 853610.0 825380.0 838810.0 805820.0 882490.0 925050.0 821030.0 True False 873083.9081340232 805709.11477273 802497.6002826485 934736.8377527948 890332.710230204 833574.6756492286 887280.1496453267 879428.848164714 757084.2386128235 813756.3129516746 1.0729058493778736 0.990111046696823 0.9861645157280706 1.1486692304263633 1.0941023695420191 1.0243541738259068 1.0903511721180568 1.080702950217161 0.9303574381705392 1.0 19.634237304885588 -7.756271819306464 24.999864442629516 0.9651787075749384 1.0598612194140726 0.37359718350389226 0.0495737751535037 130.31508063147598 630468.9918248296 0.03776875162615735 0.013306473568308282 1.7527831141466558e-08 7.756271819306464 0.09468251183913423 S(ph)AS(ph)PYPSHSLSS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 1 SASPYPSHSLSSPQR 15 0 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 3 S(0.98)AS(0.956)PY(0.03)PS(0.03)HS(0.005)LS(0.243)S(0.756)PQR 116.04 0.00075829 224240000.0 484410.0 478020.0 410600.0 456620.0 424380.0 462450.0 419100.0 432630.0 538500.0 445800.0 True False 457538.81165260565 455055.2016773518 437067.9329832281 500017.0275121909 457776.29160810035 459563.678012883 461466.7180218373 431129.3075066014 440721.97448030446 441850.55882715166 1.0355057892584698 1.0298848617171619 0.9891759198933265 1.1316428541800114 1.036043255944322 1.0400884842892335 1.0443954608697448 0.9757355714361688 0.9974457781611888 1.0 18.75319898320674 -7.251949135271326 24.07109182311412 0.9899430064205454 1.044117128905998 0.33884959714086627 0.03375912158924565 447.642245597856 1135404.2804546526 0.016397362367183293 0.00929581914252649 5.598231643495681e-08 7.251949135271326 0.054174122485452614 S(ph)ASASHQADIK ddPTM_KYSE-520_SHP099_60min_R1 2 SASASHQADIK 11 0 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.391)AS(0.271)AS(0.339)HQADIK;S(0.547)AS(0.375)AS(0.077)HQADIK 145.1 5.0532e-05 142547000.0 344470.0 459950.0 333710.0 749180.0 367140.0 374720.0 403860.0 483340.0 600850.0 287120.0 True False 325361.56241607975 437853.3116009752 355221.48055487836 820381.8419508196 396031.8292591498 372381.23348467366 444686.1100937702 481663.4063524046 491750.7861958973 284576.3401759802 1.1433190904587438 1.5386145992678435 1.2482467106549044 2.882818162056272 1.3916540953975522 1.3085460065105747 1.562625022933316 1.6925630783449779 1.728010086473815 1.0 18.118456194875705 -10.370985512796983 7.212274362832792 0.9999819502228546 1.6210075950429246 0.1354567840143469 0.462201797304795 0.00013516204524782294 1.1788747871518191e-05 0.450916898545515 0.10936024229498746 4.256126104899408e-11 10.370985512796983 0.6210256448200699 S(ph)ASDSGCDPASK ddPTM_KYSE-520_SHP099_60min_R1 6 SASDSGCDPASK 12 0 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.998)AS(0.002)DSGCDPASK;S(0.998)AS(0.002)DSGCDPASK;S(0.976)AS(0.024)DSGCDPASK;S(0.993)AS(0.003)DS(0.004)GCDPASK;S(1)ASDSGCDPASK;S(0.985)AS(0.015)DSGCDPASK 270.45 1.3871e-24 1937710000.0 3707630.0 3815180.0 3617180.0 4401960.0 4609890.0 5585520.0 6362630.0 7936480.0 8269950.0 6919150.0 True False 3501960.372922831 3631893.026098074 3850349.2104926286 4820320.954902469 4972662.116313847 5550658.697836555 7005826.733684755 7908950.203268349 6768335.548474267 6857851.714017248 0.5106497659850134 0.5295963193071952 0.5614512198656363 0.7028908112798465 0.7251049342682448 0.8093873897114414 1.021577459799116 1.1532693521358426 0.9869469085544658 1.0 22.70932527882303 -6.2087832904326605 0.8752210919653968 1.0751036865153998 0.524931550428884 0.9228044673453734 0.060727115942764934 0.14959726100058227 0.248374611381291 0.038994360265521694 0.03835832182482998 6.183248624672137e-07 6.2087832904326605 -0.5501721360865158 S(ph)ASDSGCDPASKK ddPTM_KYSE-520_SHP099_60min_R1 4 SASDSGCDPASKK 13 1 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.994)AS(0.003)DS(0.003)GCDPASKK;S(1)ASDSGCDPASKK;S(0.998)AS(0.002)DSGCDPASKK;S(0.748)AS(0.151)DS(0.102)GCDPASKK 155.43 1.7270999999999998e-05 2266280000.0 2023180.0 2232850.0 2135100.0 2298370.0 2356180.0 2953870.0 3260390.0 3943100.0 4623520.0 3507070.0 True False 1910950.1722906579 2125580.5344238225 2272731.962280789 2516806.3937698607 2541597.961169647 2935433.8016475583 3589982.039540004 3929422.306426454 3784005.317454371 3476000.088259172 0.5497555016598655 0.61150186434211 0.6538354155851025 0.7240524539314127 0.7311846653152744 0.844486112518387 1.0327911243920351 1.1304436728004692 1.088609097058295 1.0 21.72899668810798 -6.403149905289568 1.048728517717132 1.0988895960441374 0.6145269634108371 0.9379510337414951 0.05014429925487043 0.1170177819181002 0.2672337995065969 0.031049687477753832 0.02455297528672919 3.952301750460695e-07 6.403149905289568 -0.48436263263330026 S(ph)ASFREEYIR ddPTM_KYSE-520_SHP099_60min_R1 3 SASFREEYIR 10 1 P05120;H7C004;H7BYS2;E7EPJ9 P05120 SERPINB2;SERPINB10 Plasminogen activator inhibitor 2 1 S(0.5)AS(0.5)FREEYIR;S(0.5)AS(0.5)FREEYIR;S(0.574)AS(0.426)FREEYIR 120.59 0.00033679 2937950000.0 2933460.0 2844790.0 2869040.0 2431600.0 2680020.0 2694990.0 2406790.0 2793030.0 3480210.0 2853010.0 True False 2770735.126092471 2708122.0182831543 3053982.909026308 2662698.5329128015 2890922.3267720947 2678169.5677542193 2650091.821206817 2783341.6308281 2848291.59295469 2827734.5510081914 0.9798427243125074 0.9577002258990714 1.080010465599556 0.9416366652815595 1.0223457239794218 0.9471078417878204 0.9371784279616917 0.984300888439382 1.0072697919750526 1.0 21.43121526517216 S(ph)ASFSVK ddPTM_KYSE-520_SHP099_60min_R1 1 SASFSVK 7 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.997)AS(0.003)FSVK 84.615 0.02017 0.0 415030.0 356290.0 371740.0 343980.0 388520.0 392070.0 333730.0 374730.0 487300.0 422010.0 True False 392007.4585582063 339173.29359780735 395702.9552050303 376671.75577864156 419094.31362359104 389622.94569901767 367466.68529092695 373430.1490926392 398818.60383333813 418271.3197188113 0.9372085535812944 0.8108930199321849 0.9460437198301023 0.9005440679792829 1.0019676077846624 0.9315076777459834 0.8785366530460695 0.8927940585160914 0.9534925896938128 1.0 18.674079552222757 S(ph)ASLSSLLITPFPSPNSSLTR ddPTM_KYSE-520_SHP099_60min_R1 3 SASLSSLLITPFPSPNSSLTR 21 0 A0A087WX11;J3KNG8;Q8TF40-3;Q8TF40;Q8TF40-2 A0A087WX11 FNIP1 Folliculin-interacting protein 1 1 S(0.558)AS(0.442)LSSLLITPFPSPNSSLTR;S(0.498)AS(0.498)LS(0.003)SLLITPFPSPNSSLTR;S(0.494)AS(0.494)LS(0.011)S(0.002)LLITPFPSPNSSLTR 132.13 4.4599e-07 164158300.0 120239.0 148112.0 110463.0 91691.0 97237.0 125550.0 90577.0 117720.0 137169.0 109965.0 True False 113569.10297949595 140996.4771993556 117583.6217270491 100405.28507209566 104888.99869715104 124766.39587959215 99733.40710633235 117311.65679605452 112262.56734909739 108990.79565147535 1.0420063666904575 1.2936549032106 1.0788399242726094 0.9212271960392514 0.9623656573033854 1.1447424998947906 0.9150626574491139 1.076344622450387 1.0300187890001677 1.0 16.733846777983338 -4.994768687897401 24.9415055422978 1.0095333349132474 1.172434877109732 0.3582901220115424 0.08597044182376339 135.6120697613096 646544.5901029209 0.021414310305978235 0.044351097164044485 1.0121183809671573e-05 4.994768687897401 0.16290154219648456 S(ph)ASLVTR ddPTM_KYSE-520_SHP099_60min_R1 1 SASLVTR 7 0 Q9H2K8 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 1 S(0.5)AS(0.5)LVTR 73.665 0.029162999999999998 284490000.0 1331400.0 1183900.0 1343600.0 1130600.0 1084500.0 1148700.0 1046700.0 1141600.0 1365600.0 1251300.0 True False 1257544.5879198995 1127023.6669298704 1430210.6058360112 1238051.8840727154 1169843.9800390808 1141530.5372113693 1152510.65080758 1137640.0560514417 1117641.4639745664 1240214.4554966702 1.0139734965565201 0.9087328904568605 1.1531962069118546 0.9982562923578497 0.943259429733539 0.9204299564096107 0.9292833555516272 0.9172930141310517 0.9011679060997424 1.0 20.24215817955737 -5.737358445497786 3.9988147396434184 0.9291050560963674 1.0223125183735264 0.3175753677441753 0.06029427665586118 0.252812064704661 8.850376532447306 0.018612887196055517 0.023304620328717298 1.8308027432731997e-06 5.737358445497786 0.09320746227715904 S(ph)ASPDGGPR ddPTM_KYSE-520_SHP099_60min_R1 2 SASPDGGPR 9 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.721)AS(0.279)PDGGPR;S(0.735)AS(0.265)PDGGPR 93.111 0.006440100000000001 759040000.0 944010.0 723480.0 760170.0 795720.0 783910.0 915520.0 985430.0 661810.0 975130.0 831220.0 True False 891643.8834627202 688722.9348343806 809171.7745150037 871344.9895580593 845599.257162229 909805.9000850983 1085046.8812700033 659514.3355776153 798070.9730268893 823856.0374793735 1.0822811788704576 0.8359748590804299 0.9821761784870849 1.0576422941852566 1.0263920135238433 1.1043263127241167 1.3170345690367888 0.8005213357365573 0.9687019779191339 1.0 19.652032733981237 -3.9303168152690366 21.114981051992697 1.014254626982419 3.0962475218567707 0.024166959890301043 0.13512633652261577 3673.210091515122 1102248.2934378348 0.0339037511072511 3486.1181204111476 0.0001174040786628347 3.9303168152690366 2.0819928948743516 S(ph)ASPHDVDLCLVSPCEFEHR ddPTM_KYSE-520_SHP099_60min_R1 4 SASPHDVDLCLVSPCEFEHR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.557)AS(0.443)PHDVDLCLVSPCEFEHR;S(0.575)AS(0.425)PHDVDLCLVSPCEFEHR;S(0.562)AS(0.438)PHDVDLCLVSPCEFEHR;S(0.577)AS(0.423)PHDVDLCLVSPCEFEHR 231.89 1.4056e-20 3924080000.0 597524.0 772830.0 721430.0 1432610.0 647920.0 675740.0 663824.0 523883.0 778190.0 668042.0 True False 564378.1525854369 735702.0867585208 767934.532128812 1568764.8236700979 698907.6178394845 671522.4560069747 730929.8082179144 522065.77214821184 636890.3125734978 662123.6676088118 0.8523757421685707 1.1111248891244585 1.159805289700827 2.369292777791078 1.0555545014174075 1.0141949138173925 1.1039173555864399 0.7884716974905852 0.961890268737196 1.0 19.336741174827747 -5.975278351378304 24.99971289309787 0.9759749310875401 1.3858481627660195 0.20184261899711986 0.37842931537133306 386.46773987614694 390812.77430432074 0.12375192303462894 0.1403162258971276 1.058575037605243e-06 5.975278351378304 0.40987323167847944 S(ph)ASPHDVDLCLVSPCEFEHRK ddPTM_KYSE-520_SHP099_60min_R1 1 SASPHDVDLCLVSPCEFEHRK 21 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.5)AS(0.5)PHDVDLCLVSPCEFEHRK 66.138 0.009651999999999999 264050000.0 99997.0 149980.0 131510.0 239440.0 106330.0 89849.0 78648.0 84992.0 173580.0 81795.0 True False 94449.96707092256 142774.73567543033 139987.34502343964 262196.305609739 114697.56606505824 89288.21906320562 86598.50737051158 84697.18258928186 142062.24759571266 81070.35993554708 1.1650369770901794 1.7611212752594134 1.7267389109254359 3.234182083540661 1.4147903889441913 1.101366999408809 1.0681895015559264 1.044736728153399 1.7523327601931904 1.0 16.306886927900056 -5.983283631787394 24.999827630951447 1.196053125352057 1.9873793912122655 0.33115114309922333 0.5240214953214068 289.3657464364843 432752.8777896464 0.1670104754639988 0.1893275669929644 1.0392412299151019e-06 5.983283631787394 0.7913262658602085 S(ph)ASPPQKR ddPTM_KYSE-520_SHP099_60min_R1 2 SASPPQKR 8 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 S(0.655)AS(0.345)PPQKR;S(0.541)AS(0.459)PPQKR 55.567 0.033939 6568900000.0 468850.0 397710.0 354870.0 377780.0 371760.0 370200.0 323020.0 401560.0 447300.0 433090.0 True False 442841.9558706965 378603.4146251195 377745.4880120753 413684.09761630086 401015.39697494585 367889.4444812821 355674.0139714001 400167.0820848087 366081.5955153948 429253.15953892114 1.0316568347368058 0.8820049572419998 0.8800063077411652 0.9637298839236416 0.9342165294850557 0.8570453968852497 0.8285879930469108 0.932240271719013 0.8528337820707446 1.0 18.711469227730866 -6.235353818633033 22.404676064553225 0.8858094168640004 0.9333658425536042 0.10792089945030037 0.06037662293916832 442.56463769892196 380113.7569074285 0.019381237719466968 0.01937029641699414 5.816291728565893e-07 6.235353818633033 0.04755642568960383 S(ph)ASPS(ph)VGEERPR ddPTM_KYSE-520_SHP099_60min_R1 2 SASPSVGEERPR 12 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 2 S(0.948)AS(0.092)PS(0.96)VGEERPR;S(0.822)AS(0.271)PS(0.906)VGEERPR 107.61 0.0014435000000000001 578910000.0 1135530.0 982970.0 947300.0 990710.0 1028150.0 1037000.0 1004300.0 1098940.0 1151020.0 1031650.0 True False 1072539.8872770648 935746.6457319485 1008364.4737335908 1084866.7805321785 1109059.555626723 1030527.6983443813 1105824.4450234566 1095128.0336345253 942023.7828529627 1022510.3836115553 1.048928113070894 0.9151463503254088 0.9861655098034305 1.0609836319709316 1.084643807439365 1.0078408149798033 1.081479917218671 1.071018985417518 0.9212852973929614 1.0 19.963684063159985 -5.154606189972566 5.93011926589247 1.0384676208472372 0.9750078628050357 0.1318220789895782 0.05548388074652834 0.36924380193638484 17.376335302236118 0.014720651575369875 0.025895196093711183 7.004768873064975e-06 5.154606189972566 -0.0634597580422015 S(ph)ASQSS(ph)LDKLDQELK ddPTM_KYSE-520_SHP099_60min_R1 1 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 S(0.647)AS(0.353)QS(0.021)S(0.979)LDKLDQELK 228.94 2.4403999999999998e-14 1476900000.0 3203200.0 2955500.0 2510900.0 2872000.0 3007200.0 3067300.0 3260000.0 3361200.0 4047900.0 3266800.0 True False 3025512.1105791125 2813513.3437040537 2672756.6315820464 3144954.0165017177 3243849.5313725458 3048155.8429428358 3589552.614533971 3349540.7817099765 3312903.3992550103 3237858.6935319444 0.9344175879642238 0.8689425975643787 0.8254704372742502 0.9713067536839034 1.0018502468475752 0.9414110161854606 1.108619292653068 1.0344925763440918 1.0231772639964114 1.0 21.62660859431329 -5.487014074791549 3.3690028448401357 1.0200337942732385 0.8759133240700411 0.6506242692470041 0.046275955729941046 0.15365760850484184 3.5592822648149434 0.014463750687478398 0.021251185721869455 3.2582614132528303e-06 5.487014074791549 -0.1441204702031974 S(ph)ASQSSLDKLDQELKEQQK ddPTM_KYSE-520_SHP099_60min_R1 1 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.584)AS(0.414)QS(0.002)SLDKLDQELKEQQK 145.89 1.3027e-06 1334700000.0 908400.0 908240.0 1022300.0 703640.0 759920.0 791450.0 606600.0 790720.0 1429100.0 861240.0 True False 858009.2411494948 864606.7871039668 1088199.0937378332 770513.7340429191 819721.3806466571 786510.266976529 667921.0478454937 787977.176875436 1169611.4646792996 853610.083634581 1.005153591316755 1.0128825838403444 1.2748198675259284 0.9026530365739749 0.960299551706759 0.9213928959550852 0.7824662110381322 0.9231113736617461 1.3701940582744974 1.0 19.703217693152663 -3.832552273985473 7.260557863195963 1.0066531465065927 0.981260364030741 0.0 0.16781878881859968 766756.6159551996 1164081.1169283227 0.042871404663788776 296090.0684348925 0.00014704414146308326 3.832552273985473 -0.02539278247585164 S(ph)ASVNKEPVSLPGIMR ddPTM_KYSE-520_SHP099_60min_R1 2 SASVNKEPVSLPGIMR 16 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.643)AS(0.357)VNKEPVSLPGIMR;S(0.556)AS(0.444)VNKEPVSLPGIMR 96.059 0.0019089999999999999 999140000.0 2053510.0 2048860.0 1923720.0 1573880.0 1812090.0 2140000.0 1828790.0 2193400.0 2793400.0 2124000.0 True False 1939597.7067293033 1950429.6901984431 2047726.0692608259 1723461.0819957233 1954691.173618274 2126643.466207307 2013661.9404704252 2185791.607343408 2286188.975883532 2105183.0124469935 0.9213439854213817 0.9264893734494511 0.972706912963647 0.8186751801651821 0.9285136551364278 1.0101941036163733 0.956525835789361 1.0382905402617313 1.0859811058546132 1.0 21.005514227638503 -6.704716248787911 1.2402809798644572 1.0424697750350065 0.9135284031130889 0.5549305073697042 0.046951426650014484 0.35877734337340694 1.1157950794985998 0.030483243709773747 0.01843042481395094 1.973711861906318e-07 6.704716248787911 -0.12894137192191757 S(ph)ASWGSADQLKEQIAK ddPTM_KYSE-520_SHP099_60min_R1 1 SASWGSADQLKEQIAK 16 1 Q86VQ1;H7C0Q2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 S(0.527)AS(0.461)WGS(0.012)ADQLKEQIAK 74.953 0.0096994 508390000.0 259720.0 337220.0 302670.0 151820.0 196180.0 209640.0 127680.0 153470.0 329470.0 157120.0 True False 245312.81386101575 321019.4450224609 322180.5924891222 166248.92715365253 211618.2498884897 208331.55899799042 140587.140436717 152937.64839016748 269646.5532628151 155728.03903751035 1.575264257979432 2.061410693967171 2.0688669457368447 1.067559369405583 1.358896260406368 1.3377909353100466 0.9027734588172246 0.9820816426856134 1.7315221775692244 1.0 17.24866920137432 -5.262490888235019 24.99937346782334 1.196808897715099 1.9178036609378821 0.6047781802957861 0.26093041443677084 61.544419055406145 1463218.8703855595 0.07224027415458995 0.11441515721444749 5.463980135275264e-06 5.262490888235019 0.7209947632227831 S(ph)AT(ph)PPATR ddPTM_KYSE-520_SHP099_60min_R1 4 SATPPATR 8 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)AT(0.999)PPAT(0.001)R;S(1)AT(1)PPATR;S(1)AT(1)PPATR;S(1)AT(1)PPATR 109.16 0.0026889 6634400000.0 2554390.0 2200090.0 2002900.0 2277380.0 2341730.0 2390550.0 2222600.0 2350610.0 2369240.0 2276390.0 True False 2412692.8946497785 2094394.373997586 2132010.1387533084 2493821.510480736 2526010.828378902 2375629.690720501 2447282.098485647 2342456.2825464974 1939045.739680067 2256222.9556046184 1.0693503887355094 0.9282745611620347 0.9449465680939215 1.1053081009950305 1.1195750056988434 1.0529232870445129 1.0846809675464137 1.0382202152175029 0.859421155548187 1.0 21.105478208449107 -7.698451897455438 11.193618530677528 0.9298688020679878 1.0422700783858652 0.3131856581770136 0.06705089777645369 0.6288739596947566 109.07105238838517 0.048781925898186314 0.01838575741444389 2.0023873941393702e-08 7.698451897455438 0.11240127631787733 S(ph)ATDADVVNSGWLVVGK ddPTM_KYSE-520_SHP099_60min_R1 1 SATDADVVNSGWLVVGK 17 0 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 S(0.5)AT(0.5)DADVVNSGWLVVGK 81.428 0.0059597999999999995 126390000.0 68706.0 102180.0 75365.0 54899.0 67039.0 63151.0 45337.0 85880.0 100250.0 89375.0 True False 64894.74121798462 97271.11942469311 80223.14848826354 60116.58445401381 72314.58790026743 62756.85118432593 49920.10640648059 85582.10232454263 82047.12709684404 88583.20703269776 0.7325851410418086 1.0980762910151636 0.9056247925032974 0.6786453828864384 0.8163464647828198 0.708450882356982 0.5635391636707635 0.9661210650564124 0.9262153611864479 1.0 16.4347456085001 -10.540699975957018 9.264228905950024 1.0000099335758839 0.8212828728168464 0.1136164995231187 0.14937103861741205 3.240854391496003e-05 1.6067290714719372e-06 0.152942433132124 0.03709192856771507 2.879386897213743e-11 10.540699975957018 -0.17872706075903744 S(ph)ATPVNCEQPDILVSSTPINEGQTVLDK ddPTM_KYSE-520_SHP099_60min_R1 1 SATPVNCEQPDILVSSTPINEGQTVLDK 28 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 S(0.551)AT(0.449)PVNCEQPDILVSSTPINEGQTVLDK 178.91 7.118000000000001e-11 138900000.0 130410.0 230320.0 166820.0 160980.0 130180.0 193850.0 127670.0 192150.0 225570.0 208130.0 True False 123175.89733411012 219255.08148263162 177573.48412143718 176279.49079959834 140424.42537712096 192640.11024499347 140576.12953912644 191483.47649814695 184612.17415695896 206286.13012268997 0.5971118720432173 1.0628687510509227 0.8608115534273887 0.8545387452600667 0.6807264516213604 0.9338490674599381 0.6814618581264669 0.9282421284662278 0.8949325582246355 1.0 17.654287297716976 -7.842256910888476 1.7418587612071035 0.9898643980938349 0.8244877029021185 0.16043565581806163 0.13091231722677535 0.6378233707695605 4.045961711567697 0.11797592762208364 0.034512692064586716 1.437947695444367e-08 7.842256910888476 -0.16537669519171638 S(ph)ATREPPYR ddPTM_KYSE-520_SHP099_60min_R1 1 SATREPPYR 9 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 S(0.998)AT(0.002)REPPYR 160.52 9.3312e-05 519200000.0 118670.0 91505.0 89093.0 80209.0 113340.0 108360.0 90978.0 103440.0 133000.0 99821.0 True False 112087.13853722002 87108.96244819488 94836.07733384025 87832.03924428482 122259.21318361413 107683.6850458988 100174.9440997153 103081.19078307737 108850.55265715966 98936.66359956276 1.1329181160877086 0.880451788840996 0.9585534207791839 0.8877602705482075 1.235732121293753 1.0884103135086385 1.0125158910266507 1.0418907110137574 1.1002044004406948 1.0 16.59421762845447 -5.730306371057961 24.999998928178567 1.0789541175706099 0.9584326013771581 0.28591659400432834 0.08869201552689836 255.4071329951761 205092.4848784393 0.02594231706865284 0.03348785004308204 1.860773999028141e-06 5.730306371057961 -0.12052151619345175 S(ph)ATREPPYRVPR ddPTM_KYSE-520_SHP099_60min_R1 3 SATREPPYRVPR 12 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 S(0.987)AT(0.013)REPPYRVPR;S(0.876)AT(0.123)REPPYRVPR;S(0.952)AT(0.048)REPPYRVPR 72.615 0.015463999999999999 5934600000.0 2683290.0 3096730.0 3191840.0 2128920.0 2064450.0 2261720.0 1915530.0 1655260.0 3402990.0 2538510.0 True False 2534442.554693998 2947958.442513506 3397591.113524566 2331251.91671686 2226910.4698862927 2247603.7665375653 2109170.466171249 1649518.289400588 2785092.7983969 2516020.7763308967 1.0073217910346375 1.1716749202733143 1.3503827732612208 0.9265630628521739 0.885092242017885 0.8933168548056416 0.8382961245840919 0.6556059889958755 1.106943481785707 1.0 21.26271240481077 -5.410699485587589 6.4791327246543435 0.8788244332002749 1.1747480801170351 0.47116354412860373 0.13325012574907677 0.19526826217589083 9.911589181782839 0.0372184025239528 0.055362943665290106 3.884190434666377e-06 5.410699485587589 0.2959236469167602 S(ph)ATRPS(ph)PS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 2 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.896)AT(0.106)RPS(0.999)PS(1)PER;S(0.753)AT(0.249)RPS(0.999)PS(0.999)PER 77.372 0.0182 79616000.0 372910.0 366640.0 301670.0 323980.0 363590.0 331230.0 305770.0 327040.0 386850.0 336770.0 True False 352223.9389223451 349026.0640621404 321116.13088906626 354770.96179186116 392202.4644558876 329162.6707064696 336680.21562762366 325905.5745717097 316607.7916949041 333786.47980309505 1.0552372856148236 1.0456566852798692 0.9620405568209258 1.062867980755677 1.1750100384151356 0.9861474044744021 1.0086694219197725 0.9763893815110953 0.9485339007190319 1.0 18.34856599319945 -6.464442632629752 24.99999682790406 0.983712333575774 1.0567080358387735 0.3638145041330286 0.050297940230361285 334.2139431222467 142982.57482984688 0.01896562247136135 0.016726070589302013 3.432079722593623e-07 6.464442632629752 0.07299570226299945 S(ph)ATTT(ph)PSGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 SATTTPSGSPR 11 0 A0A096LP25;A0A096LNZ0;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LP25;Q2M2I8 AAK1 AP2-associated protein kinase 1 3 S(1)AT(0.001)T(0.004)T(0.994)PSGS(1)PR;S(1)AT(0.002)T(0.005)T(0.991)PS(0.002)GS(1)PR 172.85 3.5707999999999997e-07 173596000.0 406660.0 363660.0 366510.0 359370.0 301270.0 325990.0 299090.0 323460.0 378600.0 320200.0 True False 384101.7591433878 346189.2277352116 390135.8210367338 393524.41675146925 324978.2350081823 323955.3754901497 329324.9360371059 322337.99275613175 309855.78372932813 317363.2771118301 1.2102904993889414 1.0908295089643407 1.2293036062242977 1.2399809465441147 1.0239944519279365 1.0207714592510864 1.0376907468127161 1.0156751458126287 0.9763441647980698 1.0 18.275775674463244 -5.774560945027611 24.438610502583103 1.0148782003093937 1.187953329439898 0.8233343204006563 0.04085807587422591 74.07747976138619 137967.08723372364 0.013124193936781289 0.01497669349423416 1.6805020824349868e-06 5.774560945027611 0.17307512913050438 S(ph)AVEQLCLAESTRPR ddPTM_KYSE-520_SHP099_60min_R1 4 SAVEQLCLAESTRPR 15 1 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;A0JP02;Q9HAU0-5;H0YGJ6 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 S(1)AVEQLCLAESTRPR;S(1)AVEQLCLAESTRPR;S(1)AVEQLCLAESTRPR;S(1)AVEQLCLAESTRPR 198.05 1.6894e-11 2580710000.0 655926.0 690590.0 598442.0 705227.0 598579.0 607999.0 620425.0 627215.0 745292.0 676556.0 True False 619540.4772239368 657413.0198032772 637018.5288610547 772251.5620457707 645683.7618513723 604204.2527152216 683143.6137644906 625039.3375580808 609965.7600824059 670562.240192603 0.923911965347152 0.9803907533094185 0.9499767369514966 1.1516478497565863 0.9628990765509181 0.9010412702953247 1.018762424750123 0.9321123381157775 0.9096333248755668 1.0 19.355011720734876 -5.979944637506572 24.99986843879472 0.9499701123144376 1.0039184908329166 0.11162588862164557 0.06577509777094635 523.064338810142 652018.864987707 0.020781112233408366 0.02356090124956631 1.0472620412103902e-06 5.979944637506572 0.053948378518479 S(ph)AVFLSFK ddPTM_KYSE-520_SHP099_60min_R1 2 SAVFLSFK 8 0 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 S(1)AVFLSFK;S(0.998)AVFLS(0.002)FK 109.42 0.0011152999999999998 525970000.0 962780.0 910940.0 849830.0 849190.0 894250.0 801330.0 888270.0 956470.0 1117490.0 854220.0 True False 909372.6741456537 867177.0750511843 904611.4015760766 929896.762281717 964622.387413507 796328.6022317294 978065.0002797832 953152.228811775 914581.985630447 846652.2753731033 1.0740804703382043 1.0242423014442807 1.0684568244707449 1.098321931364242 1.1393371463962776 0.9405615804679704 1.1552145180839073 1.125789484699299 1.0802333050217203 1.0 19.69141004305206 -4.993403785890329 23.058719142040403 1.08254059448044 1.0484584061072812 0.025233487360498685 0.0623266301303401 223.36080580047923 780763.3861311325 0.01608305112611981 0.033315717309547424 1.015304273360077e-05 4.993403785890329 -0.034082188373158795 S(ph)AVFPGEGK ddPTM_KYSE-520_SHP099_60min_R1 6 SAVFPGEGK 9 0 A0A1B0GUN5;Q5VTI5;Q9Y2H5 A0A1B0GUN5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)AVFPGEGK;S(1)AVFPGEGK;S(1)AVFPGEGK;S(1)AVFPGEGK;S(1)AVFPGEGK;S(1)AVFPGEGK 148.19 0.00030361 5059000000.0 4913170.0 4594400.0 4757030.0 5168280.0 4836420.0 4213030.0 4908660.0 5222300.0 5694800.0 5098790.0 True False 4640626.665938421 4373678.1276650075 5063675.765317117 5659471.777299956 5217018.73853445 4186734.9170258753 5404875.256705016 5204185.06019398 4660767.874225515 5053618.68739859 0.9182779613962601 0.8654547163542349 1.0019900745467014 1.1198850026837375 1.032333276656449 0.8284627661888448 1.0695059502970217 1.0297937739487217 0.9222634635745935 1.0 22.26888538149909 -4.770438811062228 24.530095783266287 1.003310152093212 0.8918663406766011 0.24488812580958674 0.0761992973493831 189.42848542926782 516338.3129574653 0.020617662866075418 0.04396497266645994 1.6965286139802564e-05 4.770438811062228 -0.11144381141661086 S(ph)AVKKAESER ddPTM_KYSE-520_SHP099_60min_R1 2 SAVKKAESER 10 2 B1AKD8;Q5TZA2-2;Q5TZA2 B1AKD8 CROCC Rootletin 1 S(0.981)AVKKAES(0.019)ER;S(0.972)AVKKAES(0.028)ER 67.385 0.017 2873900000.0 787590.0 2541700.0 1186050.0 3190800.0 2306400.0 1713010.0 2369700.0 1145560.0 1738870.0 1265340.0 True False 743900.8126782586 2419592.9168305174 1262504.6807470974 3494052.6726510003 2487900.558379103 1702318.469181203 2609252.4020433025 1141586.3197357135 1423135.0413455283 1254130.0720196238 0.593160812642262 1.929299815715333 1.006677623728444 2.78603691164526 1.983765969643517 1.357369946834802 2.080527738116844 0.910261499349368 1.1347587248695366 1.0 20.258255554247267 -7.276200622548897 24.59120719970175 1.0168824881469203 1.7028333403535745 0.21665056103582092 0.5750732273825239 1030.5654137924612 1716839.4960695931 0.30931335395235376 0.14964362718228222 5.294188221099266e-08 7.276200622548897 0.6859508522066542 S(ph)AVKNEEYFMFPEPK ddPTM_KYSE-520_SHP099_60min_R1 1 SAVKNEEYFMFPEPK 15 1 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 S(1)AVKNEEYFMFPEPK 124.31 6.1013999999999996e-05 134350000.0 215890.0 221870.0 195870.0 198130.0 204730.0 200550.0 197640.0 257130.0 255430.0 211040.0 True False 203914.15133395497 211211.03216634036 208496.0936030807 216960.21563004315 220841.086245644 199298.29305975462 217619.37998052 256238.07604459286 209050.35086630328 209170.34978663528 0.9748712068510574 1.0097560786305835 0.996776521221854 1.0372417307297805 1.0557953671297746 0.9528037471039721 1.0403930585883858 1.225021023801744 0.9994263100843193 1.0 17.67431883631117 -7.008324116639805 24.9986618889458 1.093875607798794 1.0072708472783174 0.1734699772675199 0.06505229554296814 510.2229529110447 1532279.56393213 0.026765225683341616 0.017062060329841672 9.810155318345056e-08 7.008324116639805 -0.0866047605204765 S(ph)AVLLVDETATTPIFANR ddPTM_KYSE-520_SHP099_60min_R1 10 SAVLLVDETATTPIFANR 18 0 Q12802-2;Q12802;Q12802-4;A8MYJ1;A0A087WTD7;A0A087WY36;A0A087WX73 Q12802-2 AKAP13 A-kinase anchor protein 13 1 S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR;S(1)AVLLVDETATTPIFANR 353.92 2.8158999999999993e-60 5253866000.0 727490.9 1013044.7 1108307.9 678044.6 865478.3 777822.6 754212.9 963307.9 1261233.6 1009258.4 True False 687135.5295598456 964376.5120009043 1179751.2005893397 742485.7549224581 933586.5183120864 772967.9206347559 830456.1003405686 959966.4097326534 1032225.3713517217 1000317.1557671528 0.686917669659354 0.9640707514021538 1.179377154323198 0.7422503459445706 0.9332905198412896 0.7727228471273787 0.8301927999062296 0.9596620473798092 1.0318980989185358 1.0 19.932026055833227 -7.491230466907586 4.810369304286905 1.0118967265497683 0.8817261671690539 0.1660853278050941 0.13061335696903797 0.3877185924986777 22.649269065362116 0.08398740196892901 0.035337790276407016 3.2267813123240996e-08 7.491230466907586 -0.1301705593807143 S(ph)AVSPDLHITPIYEGR ddPTM_KYSE-520_SHP099_60min_R1 2 SAVSPDLHITPIYEGR 16 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 S(0.623)AVS(0.377)PDLHITPIYEGR;S(0.6)AVS(0.4)PDLHITPIYEGR 111.66 0.00014502 339450000.0 153154.0 283720.0 259125.0 518500.0 218643.0 255274.0 204027.0 232247.0 323600.0 238530.0 True False 144658.2423150703 270089.66532759747 275828.61211465916 567778.0841072906 235848.96019150296 253680.74027691793 224652.04027163264 231441.38936385722 264842.39729215705 236416.80977353206 0.6118779897827107 1.1424300394981273 1.1667047380382147 2.4015977740803436 0.9975980998027465 1.0730232783359326 0.9502371700507712 0.9789548788242219 1.1202350524307234 1.0 17.85097309250187 S(ph)CETSSQDLGFSYYPAENLIEYK ddPTM_KYSE-520_SHP099_60min_R1 3 SCETSSQDLGFSYYPAENLIEYK 23 0 S5FZ81;Q8WUB8-2;Q8WUB8;Q8WUB8-3 S5FZ81 PHF10 PHD finger protein 10 1 S(0.966)CET(0.031)S(0.003)S(0.001)QDLGFSYYPAENLIEYK;S(0.912)CET(0.086)S(0.002)SQDLGFSYYPAENLIEYK;S(0.652)CET(0.094)S(0.114)S(0.139)QDLGFSYYPAENLIEYK 224.56 2.1830999999999997e-21 440693000.0 349888.0 342229.0 269054.0 311898.0 300703.0 313720.0 295048.0 323157.0 368082.0 281779.0 True False 330479.0151555642 325787.805143798 286397.65134162083 341540.6921444466 324366.6153339715 311761.9571114746 324874.33123098745 322036.043792411 301247.58739212505 279282.65728074487 1.1833137738422292 1.1665164185841461 1.0254759609141204 1.222921234959168 1.1614277037184828 1.11629544113826 1.1632456321998261 1.1530828549396424 1.0786476694444376 1.0 18.091366463264503 -8.008688470810393 2.8887346004572203 1.0003758027766583 1.147811210258595 0.4834090204566549 0.048748334467617484 0.2151668736723101 4.346370698660533 0.04631855007429893 0.012441790306435644 9.80192847641733e-09 8.008688470810393 0.14743540748193662 S(ph)CHDLDLLGQSPGWGQTQAVETNIVCK ddPTM_KYSE-520_SHP099_60min_R1 7 SCHDLDLLGQSPGWGQTQAVETNIVCK 27 0 Q9P0V3;Q9P0V3-2 Q9P0V3 SH3BP4 SH3 domain-binding protein 4 1 S(1)CHDLDLLGQSPGWGQTQAVETNIVCK;S(0.993)CHDLDLLGQS(0.006)PGWGQT(0.001)QAVETNIVCK;S(0.997)CHDLDLLGQS(0.003)PGWGQTQAVETNIVCK;S(1)CHDLDLLGQSPGWGQTQAVETNIVCK;S(1)CHDLDLLGQSPGWGQTQAVETNIVCK;S(1)CHDLDLLGQSPGWGQTQAVETNIVCK;S(1)CHDLDLLGQSPGWGQTQAVETNIVCK 376.09 8.027899999999998e-94 13295122000.0 3483894.0 4048665.0 3641408.0 3760509.0 3720782.0 3487027.0 3778592.0 4100352.0 4545190.0 3356400.0 True False 3290635.454849491 3854161.056229938 3876138.986138804 4117906.644721746 4013586.375046359 3465263.1710460093 4160568.9548641597 4086128.8359413515 3719898.070915755 3326664.907239688 0.9891694975614203 1.1585660605137238 1.1651726561648326 1.2378483434746044 1.2064895283897548 1.0416628267862793 1.2506726919833975 1.2282958908932704 1.11820642434418 1.0 21.665645121144337 -4.260182096306109 4.741468059991379 1.1679000762510443 0.9787104392454626 0.2745595043593708 0.07967713160643167 0.22105298664841083 14.01185524362844 0.01912831916671252 0.1388819428104339 5.49310503933224e-05 4.260182096306109 -0.18918963700558167 S(ph)CMNQS(ph)VIEKR ddPTM_KYSE-520_SHP099_60min_R1 1 SCMNQSVIEKR 11 1 Q495T6-2;Q495T6 Q495T6-2 MMEL1 Membrane metallo-endopeptidase-like 1;Membrane metallo-endopeptidase-like 1, soluble form 2 S(1)CMNQS(1)VIEKR 64.104 0.013550999999999999 320480000.0 532280.0 582060.0 624540.0 821500.0 881680.0 478380.0 467650.0 464740.0 632710.0 490920.0 True False 502753.3673261261 554096.9639101276 664798.8476993318 899575.1130070194 951063.1999270244 475394.252973949 514924.6258241763 463127.9254111313 517825.81332113943 486570.8307299812 1.033258336863036 1.138779657380694 1.3662940844644609 1.84880608576027 1.9546243627062176 0.9770299059249721 1.0582726980399897 0.951820158878658 1.0642352163697684 1.0 18.89229030966883 -6.364551589901628 24.96025146739437 1.0102549905792693 1.4656615211367534 0.4285638616998063 0.26446724199085164 40.498583397585776 9791.656770858946 0.10591409093418101 0.0934074500659421 4.3196485140577455e-07 6.364551589901628 0.45540653055748415 S(ph)CPELTSGPR ddPTM_KYSE-520_SHP099_60min_R1 3 SCPELTSGPR 10 0 Q13111;Q13111-2;Q13111-3 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(1)CPELTSGPR;S(1)CPELTSGPR;S(1)CPELTSGPR 145.28 0.00015668 803910000.0 1637916.0 1557690.0 1604972.0 1429946.0 1524372.0 1459259.0 1411794.0 1541966.0 1820233.0 1640182.0 True False 1547057.5343754035 1482856.2342596427 1708431.0631659965 1565847.6379110583 1644331.4039097603 1450151.223296358 1554511.9153016487 1536617.2798435702 1489724.5715398495 1625651.263522286 0.9516540042071545 0.9121613396016742 1.050921007168753 0.9632125124538385 1.0114908657266382 0.8920432418908386 0.9562394777915035 0.9452318060604176 0.916386315421719 1.0 20.63258637141849 -6.248610427010747 24.90921761228719 0.9394483600866775 0.9774785551071482 0.1474440565861569 0.04295159296898024 1432.425596198565 2781259.030258981 0.014041723310643853 0.013966832310275054 5.641434797047265e-07 6.248610427010747 0.03803019502047067 S(ph)CSPSPVSPQVQPQAADTISDSVAVPASLLGMR ddPTM_KYSE-520_SHP099_60min_R1 1 SCSPSPVSPQVQPQAADTISDSVAVPASLLGMR 33 0 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.25)CS(0.25)PS(0.25)PVS(0.25)PQVQPQAADT(0.001)ISDSVAVPASLLGMR 58.137 0.029608999999999996 51770000.0 35694.0 55041.0 48401.0 52887.0 45977.0 64775.0 53849.0 58482.0 55372.0 61004.0 True False 33713.98266577509 52396.74774177469 51521.00590433815 57913.36457894363 49595.128326654514 64370.71519793375 59292.58243559505 58279.139591801446 45317.840614528184 60463.55202039384 0.557591830767793 0.8665840161706297 0.8521002187724689 0.9578227319395648 0.8202483425043653 1.064620139687163 0.9806334635384334 0.9638722444249452 0.7495067540729804 1.0 15.883778114249138 -3.852751555308139 1.2710448803289067 0.9329686612918958 1.1074155240811429e-16 0.6093681142054017 0.08776598216896991 2.3784758288178884 1.658957142606948 0.025419990386972315 3.716677905711324 0.0001403616434830531 3.852751555308139 -0.9329686612918957 S(ph)CSPSSGIIQHK ddPTM_KYSE-520_SHP099_60min_R1 1 SCSPSSGIIQHK 12 0 Q8N720;Q8N720-3 Q8N720 ZNF655 Zinc finger protein 655 1 S(0.494)CS(0.494)PS(0.006)S(0.006)GIIQHK 94.551 0.01649 0.0 217850.0 232910.0 203280.0 234310.0 242570.0 221050.0 197760.0 206410.0 244840.0 226790.0 True False 205765.4262267917 221720.65399496254 216383.7540595 256578.75195213003 261658.8789654959 219670.3449556656 217751.51075160687 205694.01188645617 200383.22791412772 224780.81703995023 0.9154047437696655 0.986386013338301 0.9626433292172 1.1414619598367612 1.1640623181781182 0.9772646431684767 0.9687281753803126 0.9150870372087767 0.8914605372152984 1.0 17.778159394594365 -6.51243692501066 21.885174651947406 0.94192179776487 1.037084661379097 0.24164597355595108 0.07569274443680432 152.64804631838814 319943.5467304487 0.030785777080594975 0.025448229416022906 3.0730036421722917e-07 6.51243692501066 0.09516286361422699 S(ph)CT(ph)PSPDQISHR ddPTM_KYSE-520_SHP099_60min_R1 1 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 2 S(0.699)CT(0.699)PS(0.601)PDQISHR 81.92 0.016091 408130000.0 835810.0 743020.0 738720.0 702990.0 764280.0 856650.0 688690.0 741160.0 937130.0 791660.0 True False 789445.9531540722 707324.2039042418 786339.0731937909 769801.95823835 824424.4878416505 851303.3295918161 758309.5061666879 738589.0889480453 766970.8151248423 784646.5083021598 1.0061166968834125 0.9014558739766392 1.0021571049813163 0.9810812258682818 1.0506954139457823 1.0849514024269222 0.9664345640274872 0.9413016959015406 0.9774730493409515 1.0 19.581683325156842 -3.908219353097747 21.133513484964197 0.9897307383564594 2.4322591702640826 0.010244224496731902 0.048937857982974856 9722.17637914675 1816205.3625929959 0.012846236094501846 127318.69839476096 0.00012353233397586157 3.908219353097747 1.4425284319076233 S(ph)CTKPSPSK ddPTM_KYSE-520_SHP099_60min_R1 2 SCTKPSPSK 9 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.93)CT(0.064)KPS(0.005)PS(0.002)K;S(0.598)CT(0.393)KPS(0.009)PSK 82.279 0.023622999999999998 16285400000.0 15637900.0 13884800.0 12903900.0 11961300.0 11841700.0 12692700.0 12945600.0 13047300.0 15277200.0 13199200.0 True False 14770434.513619198 13217753.366490308 13735706.040970003 13098098.355704028 12773574.419943545 12613480.151181994 14254267.584880685 13002041.961562699 12503245.58687189 13082265.356822198 1.1290425710495655 1.0103566168375766 1.0499485881324861 1.001210264312027 0.9764038621401548 0.9641663585889778 1.0895871010174325 0.9938677749555306 0.9557400989692998 1.0 23.64110904725476 -1.0000123438079023 0.9886862426114383 1.0008721337004507 116.4707525159726 0.49936191832508503 0.0375857686225776 1500.8204848621494 2.12271039263054 0.01250975274763662 392486.21710004465 0.09999715777358537 1.0000123438079023 115.46988038227215 S(ph)CTKPSPSKK ddPTM_KYSE-520_SHP099_60min_R1 1 SCTKPSPSKK 10 2 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.57)CT(0.4)KPS(0.028)PS(0.001)KK 74.32600000000001 0.015221 422610000.0 985740.0 849020.0 738140.0 836990.0 929250.0 1088100.0 865400.0 940130.0 1110000.0 1259300.0 True False 931059.0371760272 808231.8047949994 785721.6854657574 916537.2779497812 1002376.6882907486 1081308.7642897991 952883.0774900926 936868.9084579921 908451.980822911 1248143.5817205736 0.7459550734480056 0.6475471385117784 0.6295122588241292 0.7343203869913179 0.8030940534172889 0.8663336335064981 0.7634402735753666 0.7506098834931415 0.727842528798333 1.0 20.251352475256073 -5.574090007932888 3.4550884206750356 0.8054993971365321 0.6720396431824368 0.4073116222325621 0.07773557332731472 0.2505655419525547 6.1550547184216775 0.023173657397525693 0.03178600959439173 2.6663060128684565e-06 5.574090007932888 -0.13345975395409526 S(ph)CTLPNYTK ddPTM_KYSE-520_SHP099_60min_R1 1 SCTLPNYTK 9 0 A6NHR9;A0A2R8YCU7;J3KTL8;A6NHR9-2;A6NHR9-3 A6NHR9 SMCHD1 Structural maintenance of chromosomes flexible hinge domain-containing protein 1 1 S(0.998)CT(0.002)LPNYTK 70.488 0.022836000000000002 476080000.0 547980.0 482690.0 455870.0 358130.0 516670.0 481500.0 437650.0 534230.0 578500.0 429330.0 True False 517582.45702895237 459500.8478675393 485256.10961778904 392166.56752428977 557328.989549832 478494.7798966441 481891.9330523906 532376.8808202198 473458.98279824713 425526.4702136859 1.2163343370132507 1.0798408090495348 1.1403664485880487 0.92160322559336 1.3097398835610838 1.1244771204394388 1.1324605325031831 1.2511016777707789 1.1126428458386879 1.0 18.698889353135876 -4.236532255612297 21.335338433836604 1.1280139640498255 1.2163351346388789 0.06621222276965277 0.10483780753858771 2852.8984126029964 2443490.2788703493 0.02532666882298839 1.1700195862184766 5.8005308963039375e-05 4.236532255612297 0.08832117058905342 S(ph)DDDGFEIVPIEDPAK ddPTM_KYSE-520_SHP099_60min_R1 1 SDDDGFEIVPIEDPAK 16 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 S(1)DDDGFEIVPIEDPAK 82.102 0.0060528 74697000.0 46953.0 46077.0 43617.0 42292.0 49228.0 40629.0 42163.0 42066.0 51841.0 50101.0 True False 44348.423491515 43863.39175701296 46428.621609667505 46311.41896444654 53101.963530994806 40375.41934043767 46425.24751122577 41920.08286427819 42427.98120526178 49657.14411798815 0.893092510236607 0.8833248978795698 0.9349837255914376 0.9326234882619914 1.0693720807789826 0.8130837980634451 0.9349157776958897 0.8441903699631564 0.8544184720822954 1.0 15.599713671163013 -9.040625619435556 11.183661449972425 1.0000063863356914 0.9086032205851228 0.14810618159891387 0.06700777531224548 0.0 0.0 0.06580789140719104 0.015960758074766206 9.106979952804863e-10 9.040625619435556 -0.09140316575056862 S(ph)DDELLDDFFHDQSTATSQAGTLSSIPTALTR ddPTM_KYSE-520_SHP099_60min_R1 6 SDDELLDDFFHDQSTATSQAGTLSSIPTALTR 32 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 S(1)DDELLDDFFHDQSTATSQAGTLSSIPTALTR;S(1)DDELLDDFFHDQSTATSQAGTLSSIPTALTR;S(1)DDELLDDFFHDQSTATSQAGTLSSIPTALTR;S(1)DDELLDDFFHDQSTATSQAGTLSSIPTALTR;S(1)DDELLDDFFHDQSTATSQAGTLSSIPTALTR;S(1)DDELLDDFFHDQSTATSQAGTLSSIPTALTR 256.71 2.1499e-33 1285430000.0 171050.0 214418.0 183614.0 204782.0 172334.0 168939.0 171301.0 171251.0 240409.0 195811.0 True False 161561.5155202787 204117.0374320206 195450.05223278725 224244.4197100466 185895.7053536698 167884.5890362599 188617.77681665157 170656.97025128396 196756.78581770736 194076.26687865297 0.8324640519868189 1.051736210278847 1.0070785850131445 1.1554448326763025 0.9578487279431332 0.8650444061830108 0.9718745102129652 0.8793294151622773 1.0138116781725321 1.0 17.566264179557272 -5.981234660490605 24.99171716908496 0.936904243915913 1.0195174604177453 0.11017051949741363 0.08617159983939532 431.8971155522244 575198.5435039729 0.026240430833935846 0.02974992902222301 1.0441558824639057e-06 5.981234660490605 0.08261321650183229 S(ph)DDEQSSADKER ddPTM_KYSE-520_SHP099_60min_R1 1 SDDEQSSADKER 12 1 A6NGV6;P27540-3;P27540-4;P27540 A6NGV6 ARNT Aryl hydrocarbon receptor nuclear translocator 1 S(1)DDEQSSADKER 111.91 0.00011437 730210000.0 404280.0 294520.0 233730.0 280330.0 310170.0 329740.0 305340.0 284390.0 348350.0 338010.0 True False 381853.7824878007 280370.81711646717 248796.60978122248 306972.47891571256 334578.61437410983 327681.97034915735 336206.7470312282 283403.5174671252 285098.42118888383 335015.49436780094 1.1398093189939977 0.8368891046234971 0.7426420985415021 0.9162933776988207 0.9986959409309843 0.9781098959841171 1.0035558136368445 0.845941522800098 0.8510007028984903 1.0 18.353868295770372 -4.25043976850041 24.247364477174713 0.9063945016807717 1.1398095258361634 0.40705562424406816 0.083864083172553 1193.695163129339 2631286.2136799176 0.022887957832923658 0.32621237641241096 5.617721840998798e-05 4.25043976850041 0.23341502415539161 S(ph)DDMFTFHGPGK ddPTM_KYSE-520_SHP099_60min_R1 1 SDDMFTFHGPGK 12 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(1)DDMFTFHGPGK 114.21 0.0019314 0.0 176930.0 172990.0 153830.0 169950.0 164290.0 149230.0 165020.0 183810.0 216590.0 175760.0 True False 167115.34019878937 164679.3007367162 163746.12793670234 186101.99690266952 177218.68831776938 148298.60021594202 181701.83203999896 183172.4060115763 177262.71578958054 174202.9031392107 0.9593143236266422 0.9453304036220113 0.9399735881889864 1.0683059440975555 1.017311911134734 0.8512980986168307 1.043047094885644 1.0514888254485506 1.0175646478630993 1.0 17.4104091414829 S(ph)DEDRYQNGAER ddPTM_KYSE-520_SHP099_60min_R1 9 SDEDRYQNGAER 12 1 Q9HCG8 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 S(1)DEDRYQNGAER;S(1)DEDRYQNGAER;S(1)DEDRYQNGAER;S(1)DEDRYQNGAER;S(1)DEDRYQNGAER;S(1)DEDRYQNGAER;S(1)DEDRYQNGAER;S(1)DEDRYQNGAER;S(1)DEDRYQNGAER 172.91 1.1572e-06 4236350000.0 3585212.0 3427599.0 3095228.0 3264611.0 3461936.0 3261727.0 3285704.0 3294338.0 3953318.0 3277144.0 True False 3386333.1434170674 3262931.9991090074 3294751.3494199 3574878.6478989082 3734370.66747863 3241369.3519167984 3617855.025700837 3282910.71038227 3235495.1062368182 3248111.0537394485 1.0425546070903235 1.0045629429303213 1.014359205984277 1.1006023466418313 1.1497053535713828 0.9979244238540155 1.1138335376605162 1.0107138136803413 0.9961159125122566 1.0 21.6311695287993 -7.494620915743809 23.033010615330074 0.9998435518726978 1.0593689043563077 0.2474811533991811 0.046828301276142785 385.35576803330093 314107.2332374906 0.026960413319365297 0.012889902604531515 3.201688560272473e-08 7.494620915743809 0.059525352483609906 S(ph)DEEDFVKVEDLPLK ddPTM_KYSE-520_SHP099_60min_R1 10 SDEEDFVKVEDLPLK 15 1 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154;H0YBA1 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 1 S(1)DEEDFVKVEDLPLK;S(1)DEEDFVKVEDLPLK;S(1)DEEDFVKVEDLPLK;S(1)DEEDFVKVEDLPLK;S(1)DEEDFVKVEDLPLK;S(1)DEEDFVKVEDLPLK;S(1)DEEDFVKVEDLPLK;S(1)DEEDFVKVEDLPLK;S(1)DEEDFVKVEDLPLK;S(1)DEEDFVKVEDLPLK 225.29 1.0240999999999999e-14 3881155000.0 8746600.0 7454100.0 6653880.0 7242280.0 7474420.0 8141280.0 7842530.0 7908770.0 8261970.0 7666410.0 True False 8261408.662085181 7095993.847167785 7082799.751384423 7930584.113729119 8062614.33036764 8090467.25166553 8635329.468116915 7881336.322790799 6761804.515314841 7598491.571776724 1.0872432487483104 0.9338687527830682 0.9321323429103022 1.0437050615658896 1.0610809072046377 1.064746492806041 1.1364531218526772 1.0372238026906093 0.8898877430397354 1.0 22.85728161710286 -3.9274388693036606 18.921230672112443 1.017463145225304 2.7342286532636404 0.08815239073128533 0.07087014418892784 504.2897315362321 153871.24282670952 0.018443541801862483 6155.877507024152 0.00011818466559536724 3.9274388693036606 1.7167655080383364 S(ph)DERPVHIK ddPTM_KYSE-520_SHP099_60min_R1 4 SDERPVHIK 9 1 H0Y612;Q9UPN9-2;Q9UPN9 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 1 S(1)DERPVHIK;S(1)DERPVHIK;S(1)DERPVHIK;S(1)DERPVHIK 163.51 8.1618e-05 3656740000.0 4372070.0 4543060.0 4416090.0 4906900.0 5276000.0 6101900.0 6613000.0 7710400.0 8286400.0 6744300.0 True False 4129542.5615945286 4324804.578327919 4700758.227393824 5373250.300686717 5691191.183666388 6063815.778715122 7281506.576660475 7683654.4220208805 6781798.6431450285 6684550.748986005 0.6177741357144979 0.6469850765938099 0.7032272480101812 0.8038311776601887 0.8513947155730245 0.9071388648870615 1.0893038066567187 1.1494645953860747 1.0145481570580903 1.0 22.672399173174718 -5.914756985672915 0.81829836918823 1.0823939087880539 0.623219454503146 0.9109807547105283 0.05257922320076985 0.17560926986342587 0.2595891588193243 0.0315865906312915 0.04417196459310434 1.216866721538819e-06 5.914756985672915 -0.4591744542849079 S(ph)DFIPYR ddPTM_KYSE-520_SHP099_60min_R1 3 SDFIPYR 7 0 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 S(1)DFIPYR;S(1)DFIPYR;S(1)DFIPYR 110.87 0.0029711 432893000.0 616750.0 561230.0 516640.0 541550.0 546860.0 591010.0 594690.0 687490.0 728220.0 686670.0 True False 582537.6480393567 534267.6683765958 549943.4410532274 593018.7491770549 589894.770792229 587321.2873659724 654807.0688150955 685105.2576513714 595993.6049323073 680586.6380211756 0.8559345945037959 0.785010516706578 0.8080432531737665 0.8713346928192319 0.8667445668744898 0.8629632945389953 0.9621215466688635 1.006639301123122 0.8757057098052572 1.0 19.37641930154076 -6.402370786611221 0.9461015911886853 0.9679923478109288 0.8183785871256914 0.6578146862560443 0.042031303438902046 0.3371590684274111 0.6330784019744571 0.026693579705551158 0.021285716728822332 3.9593984924645426e-07 6.402370786611221 -0.14961376068523735 S(ph)DFQVNLNNASR ddPTM_KYSE-520_SHP099_60min_R1 2 SDFQVNLNNASR 12 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 S(1)DFQVNLNNASR;S(1)DFQVNLNNASR 151.07 1.7097999999999998e-05 1068100000.0 269030.0 226382.0 210991.0 229260.0 252400.0 256830.0 242898.0 225590.0 288040.0 261460.0 True False 254106.36960199077 215506.2689136905 224591.81745753615 251048.80147046765 272262.4440404466 255227.02870374863 267452.50029603456 224807.4809431016 235739.19689750584 259143.66781280213 0.9805617545922436 0.8316092410537539 0.8666691312703607 0.9687630170142456 1.0506235646750246 0.9848862249187476 1.0320626490832663 0.8675013471889886 0.909685345149151 1.0 17.983392616271793 -5.274333080086991 20.178847281182943 0.9739850943923807 0.8868129929964629 0.26271521035294254 0.061469215747622874 77.18278527922178 120793.10680906524 0.01829096160100989 0.027460707242019104 5.31700317822918e-06 5.274333080086991 -0.0871721013959178 S(ph)DGAPASDSKPGSSEAAPSSK ddPTM_KYSE-520_SHP099_60min_R1 1 SDGAPASDSKPGSSEAAPSSK 21 1 P80723;P80723-2 P80723 BASP1 Brain acid soluble protein 1 1 S(1)DGAPASDSKPGSSEAAPSSK 196.22 1.5095e-13 353940000.0 385590.0 311960.0 365460.0 432550.0 425100.0 347090.0 354540.0 481690.0 492090.0 371730.0 True False 364200.5540453913 296972.97333849326 389018.1363566751 473659.42194910074 458552.9515118617 344923.68256350205 390380.3631769555 480019.1298172914 402738.8605794115 368436.7614015641 0.9885022131340588 0.806035131263187 1.0558613501997405 1.2855921872379423 1.2445906585637332 0.9361815071096153 1.0595586653511884 1.3028535154615373 1.0931017280885853 1.0 18.491057490387753 -4.952596836044122 6.320805065081292 1.1403828042435815 0.9016157625150347 0.36986455381706884 0.12055201506539635 0.1952402218281006 18.31129634121868 0.032560419589061765 0.06841447656926257 1.1153294350148503e-05 4.952596836044122 -0.2387670417285468 S(ph)DGEAELLQDLGWYHGNLTR ddPTM_KYSE-520_SHP099_60min_R1 1 SDGEAELLQDLGWYHGNLTR 20 0 Q9UN19;J3KNB3;Q9UN19-2 Q9UN19 DAPP1 Dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide 1 S(1)DGEAELLQDLGWYHGNLTR 98.443 0.00065943 30528000.0 39269.0 40572.0 34999.0 47694.0 44283.0 32650.0 30889.0 41230.0 45380.0 37474.0 True False 37090.670289189264 38622.860220186434 37255.09154037995 52226.82342027605 47767.8201641961 32446.219239097434 34011.561567588935 41086.98275315435 37140.13593670608 37142.00951433085 0.9986177585485304 1.0398699673286178 1.0030445855657182 1.4061388735610787 1.2860860461996648 0.8735719920210134 0.9157167857184985 1.106213241836077 0.9999495563743247 1.0 15.180764251848418 -6.267980373633855 24.88342907765299 0.9817678024463354 1.147240284550735 0.2888415205482504 0.13150468345295085 770.1084447037508 2929657.689864878 0.05107080832673148 0.046068286001791456 5.395350042945857e-07 6.267980373633855 0.16547248210439958 S(ph)DGIYIINLK ddPTM_KYSE-520_SHP099_60min_R1 1 SDGIYIINLK 10 0 C9J9K3;A0A0C4DG17;P08865;F8WD59 C9J9K3 RPSA 40S ribosomal protein SA 1 S(1)DGIYIINLK 160.15 7.7467e-05 134750000.0 235560.0 205390.0 179130.0 178740.0 176420.0 196700.0 169200.0 170830.0 202220.0 195640.0 True False 222493.01722278207 195522.7561033248 190677.00641813362 195727.39585985953 190303.25030751008 195472.32233783958 186304.38723286768 170237.4306020216 165501.94555135976 193906.78180561672 1.1474225664052422 1.008333768848415 0.9833436697911845 1.0093891200570175 0.9814161657238012 1.0080736760088786 0.9607935601738257 0.8779343817519357 0.8535129303381891 1.0 17.565003736397415 -1.0000000000106677 0.36696612801961903 0.9263066548289827 3.4910368832449827 0.590671599555755 0.048553143339109955 49.3281967782908 0.6848016308941336 0.04165137297645718 88.92247536032708 0.09999999999754368 1.0000000000106677 2.564730228416 S(ph)DIS(ph)PLT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 S(1)DIS(1)PLT(1)PR 71.153 0.027821 115090000.0 577440.0 507140.0 556270.0 588260.0 607840.0 550800.0 557960.0 662090.0 714110.0 558660.0 True False 545408.2521018984 482776.233167341 592128.0542634698 644168.0535331821 655673.5498634903 547362.2528911146 614364.04196484 659793.3643229677 584445.6252481532 553710.7070309028 0.9850057894427874 0.8718925370904865 1.0693816224695523 1.163365716706704 1.184144611144203 0.9885347094445223 1.1095397545392816 1.1915849846229258 1.0555071769914954 1.0 19.07877289377855 -4.881732954651015 5.547533301155936 1.1069261675685287 0.9302334014020281 0.46611718047521344 0.0714616176173351 0.1578642807641412 6.961088447996472 0.018546896439561134 0.03996139956090965 1.3130070118225982e-05 4.881732954651015 -0.17669276616650054 S(ph)DISPLT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(1)DIS(0.02)PLT(0.98)PR;S(1)DISPLT(1)PR;S(0.997)DIS(0.003)PLT(1)PR 92.781 0.010893 1077420000.0 2261540.0 1972210.0 1830360.0 1912810.0 1939100.0 1981800.0 1956770.0 2237920.0 2345810.0 2143530.0 True False 2136087.8679317804 1877462.0712524373 1948347.934279546 2094602.8872927022 2091696.1380302308 1969430.851088617 2154579.407834858 2230157.177854454 1919870.0370578335 2124539.991841105 1.005435471271439 0.8837028620136483 0.9170681379318858 0.9859089004380381 0.9845407222565804 0.9269916587364063 1.0141392565492362 1.049712966768784 0.903663872852821 1.0 21.018719070183096 -5.267916406731252 24.440428382002516 0.9820940329043286 0.9302322268301995 0.15424714012743834 0.0480850756481635 606.9140199312801 2290129.6502558603 0.013284212486133375 0.02026133007869949 5.396144778460238e-06 5.267916406731252 -0.05186180607412916 S(ph)DKKPDREEIQMSNMGSNTK ddPTM_KYSE-520_SHP099_60min_R1 2 SDKKPDREEIQMSNMGSNTK 20 3 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;C9JZR2;O60716;O60716-17;O60716-18;O60716-10;O60716-9;O60716-27;O60716-29;O60716-26;O60716-25;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 S(1)DKKPDREEIQMSNMGSNTK;S(1)DKKPDREEIQMSNMGSNTK 275.69 7.706399999999999e-36 1381660000.0 1437730.0 1012740.0 928500.0 880810.0 809480.0 836210.0 829450.0 763740.0 980400.0 775100.0 True False 1357976.2508563024 964086.4502462687 988352.5956525261 964521.9175748165 873181.4706888304 830990.9032136503 913298.9006519032 761090.7641982553 802384.0738727764 768233.2170186751 1.7676614610941657 1.2549398137035157 1.286526765255062 1.2555066563222688 1.1366098879158517 1.081690930312181 1.188830267189165 0.990702754499294 1.0444537623439825 1.0 19.55118481918586 -1.0000000000000002 0.5082219496681631 1.0634827641399744 22.734433164569957 0.8696378345438452 0.07760299307945862 38.17178561657184 0.3972963631746245 0.04206971829281559 886.5472023741415 0.09999999999999995 1.0000000000000002 21.670950400429984 S(ph)DLS(ph)KAMS(ph)QDGASQFQEVIRQELELS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 1 SDLSKAMSQDGASQFQEVIRQELELSVK 28 2 E7EUC7 E7EUC7 UGP2 4 S(0.899)DLS(0.899)KAMS(0.908)QDGAS(0.296)QFQEVIRQELELS(0.999)VK 40.681999999999995 0.049838 521790000.0 270890.0 286410.0 244430.0 141600.0 253330.0 236960.0 250510.0 300990.0 330890.0 308130.0 True False 255863.19169417315 272650.43368982564 260186.3489018279 155057.6214264078 273265.6297494702 235481.04474415083 275833.99554199533 299945.9359415941 270808.71705810196 305400.20792151237 0.8377963899747239 0.8927644009983667 0.8519521013839506 0.5077194363477889 0.8947787940592997 0.7710572508996761 0.9031886304834621 0.9821405754205643 0.8867338987788103 1.0 18.220341518782554 -6.890886822789011 3.8794473497768367 0.9501347403461755 0.7915461139442471 0.32626959815068635 0.10747138403092898 0.29421053209590453 8.267063493314623 0.049443811733760196 0.03220969746853094 1.2856216494986851e-07 6.890886822789011 -0.1585886264019284 S(ph)DLVEEFWMK ddPTM_KYSE-520_SHP099_60min_R1 5 SDLVEEFWMK 10 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 S(1)DLVEEFWMK;S(1)DLVEEFWMK;S(1)DLVEEFWMK;S(1)DLVEEFWMK;S(1)DLVEEFWMK 234.61 1.7191e-13 497811000.0 808327.0 747996.0 661336.0 722526.0 684028.0 695042.0 638284.0 741973.0 818199.0 688639.0 True False 763487.4899500747 712061.1493951146 703966.7767350136 791194.6538046361 737857.1120130691 690703.9850652615 702807.9757715348 739399.2688408003 669634.686718312 682538.1942130348 1.1186003895802112 1.043254656563388 1.0313954335503317 1.159194694909172 1.0810488237421159 1.0119638591971278 1.0296976516924023 1.0833082677421828 0.981094819888284 1.0 19.380550254623092 -6.232743754783081 10.499251985543529 1.026953535016928 1.085268266314921 0.37604413311478957 0.04183159030175339 0.8999537770802786 325.66902918167585 0.014105632838015483 0.01400279257134666 5.851352275541607e-07 6.232743754783081 0.058314731297992806 S(ph)DLVKHQRT(ph)HT(ph)GEKPY(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 SDLVKHQRTHTGEKPYK 17 3 A0A087WVT1 A0A087WVT1 ZNF48 4 S(1)DLVKHQRT(1)HT(1)GEKPY(1)K 46.953 0.035082999999999996 276400000.0 121530.0 98162.0 89660.0 95603.0 94099.0 102090.0 89883.0 94626.0 112400.0 102100.0 True False 114788.48863595116 93446.1501758342 95439.62706107224 104689.08037590995 101504.05594992857 101452.81844163718 98969.2508135451 94297.76449187452 91990.99337341925 101195.47343259807 1.1343243402325383 0.9234222342768588 0.9431215035980879 1.0345233519327208 1.003049370756055 1.0025430486197637 0.9780007687741512 0.9318377719205216 0.9090425713032557 1.0 16.62678523282479 -7.0549251491049585 3.3609398774938173 0.9407699296554802 1.0009810630961975 0.17295553699919597 0.05736522083444512 0.44568937891094884 9.975555354157041 0.02866779704303924 0.016138494928903162 8.812007353567688e-08 7.0549251491049585 0.06021113344071727 S(ph)DNIKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SDNIKPK 7 1 B4DP61;A0A1W2PRV5;E7EQZ4;Q16637-4;Q16637-2;Q16637-3;Q16637;H0YBZ9;A0A0G2JRX5;A0A0G2JRY6 B4DP61 SMN2;SMN1 Survival motor neuron protein 1 S(1)DNIKPK;S(1)DNIKPK 68.893 0.019504 1824430000.0 2644930.0 2197010.0 1811900.0 2288500.0 2624770.0 2868060.0 2844200.0 2194150.0 2644300.0 3102900.0 True False 2498210.4603627617 2091462.3418207567 1928697.973142504 2505998.351937383 2831324.4661015966 2850159.3736871593 3131719.492717033 2186539.005768462 2164161.777378403 3075410.720019671 0.8123176667429912 0.6800595212230317 0.6271350881973149 0.8148499761753298 0.9206329573057763 0.9267573124896076 1.0183093504652287 0.7109746322775634 0.7036984566941227 1.0 21.55234766405794 -5.475047856566624 5.71511064136389 0.8745509754807548 0.7049734621053055 0.34207750914564783 0.10745707188574996 0.25659685872010224 20.109515701898875 0.03282956299905416 0.04804424763964415 3.3492853007116787e-06 5.475047856566624 -0.16957751337544924 S(ph)DPLLIGIPTSENPFK ddPTM_KYSE-520_SHP099_60min_R1 8 SDPLLIGIPTSENPFK 16 0 Q9UBI6 Q9UBI6 GNG12 Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 1 S(1)DPLLIGIPTSENPFK;S(1)DPLLIGIPTSENPFK;S(1)DPLLIGIPTSENPFK;S(1)DPLLIGIPTSENPFK;S(1)DPLLIGIPTSENPFK;S(1)DPLLIGIPTSENPFK;S(1)DPLLIGIPTSENPFK;S(1)DPLLIGIPTSENPFK 220.61 2.1187e-19 635339000.0 953268.0 1082302.0 809534.0 1309093.0 1170206.0 1321636.0 1153956.0 1481688.0 1719352.0 1113999.0 True False 900388.3237473551 1030306.5873515786 861717.8569401967 1433508.805126836 1262294.5546386477 1313387.1794880182 1270609.1340052662 1476548.3701565785 1407161.0181367898 1104129.8355381081 0.8154732303819526 0.9331389789403245 0.7804497525603321 1.2983154326485544 1.1432482974463383 1.1895224068896992 1.150778733722038 1.3372959616085083 1.2744524899564882 1.0 20.074478399115417 -5.259650817451523 24.999718024315648 1.20840356066034 0.852032472504521 0.7395742564970776 0.09667119040173179 76.21728714919902 1065323.1085952078 0.025866124211537608 0.041985260920036 5.499828947754091e-06 5.259650817451523 -0.3563710881558191 S(ph)DPMY(ph)SMKRR ddPTM_KYSE-520_SHP099_60min_R1 1 SDPMYSMKRR 10 2 Q6IQ21 Q6IQ21 ZNF770 Zinc finger protein 770 2 S(0.999)DPMY(0.719)S(0.282)MKRR 57.163999999999994 0.039632 401100000.0 491410.0 405560.0 369810.0 412360.0 448590.0 459900.0 482770.0 433650.0 513600.0 461070.0 True False 464150.5076984516 386076.28884202935 393648.54431692045 451550.57041944494 483891.4808720443 457029.5935087565 531573.1029811549 432145.76936467114 420343.18680238514 456985.27850703197 1.015679343577168 0.8448330985701293 0.861403119161667 0.988107476666771 1.0588776129789448 1.0000969724930073 1.1632171275140435 0.9456448373490032 0.9198177853248221 1.0 18.801788164956502 -5.421066405917539 5.1119069079730535 1.019021484273504 0.9020519843670077 0.2885264308150439 0.07500403740305148 0.2732876842818472 10.918329998523026 0.022010952368008704 0.03285550270204366 3.792569901452553e-06 5.421066405917539 -0.11696949990649619 S(ph)DRLLK ddPTM_KYSE-520_SHP099_60min_R1 1 SDRLLK 6 1 F5H385;Q9BRY0 F5H385 SLC39A3 Zinc transporter ZIP3 1 S(1)DRLLK 92.439 0.0096022 286070000.0 365590.0 327250.0 316690.0 313110.0 334480.0 322870.0 302450.0 352610.0 406470.0 355990.0 True False 345309.99391440366 311528.4187877353 337104.344121916 342867.8802600461 360801.67306913016 320854.8485674544 333024.59762754646 351386.87820979307 332665.29427485476 352836.2055560289 0.9786693895832919 0.8829264510902521 0.9554131316843709 0.9717480090222775 1.0225755389828792 0.9093591970297504 0.9438504109937879 0.9958923508318772 0.9428320819588594 1.0 18.428639082089965 -9.527369693752648 0.006463915535366634 1.9635176690811755 5.013662551163883e-07 0.10231695084468839 0.03833516117106086 23087.662318698887 34.6141136256504 5422.32893870724 5093.8606354102085 2.9691374734665313e-10 9.527369693752648 -1.9635171677149204 S(ph)DSEEKSDS(ph)EKKEDEEGK ddPTM_KYSE-520_SHP099_60min_R1 1 SDSEEKSDSEKKEDEEGK 18 3 Q99442 Q99442 SEC62 Translocation protein SEC62 2 S(0.992)DS(0.008)EEKS(0.227)DS(0.773)EKKEDEEGK 120.54 0.00014101 969970000.0 494790.0 554130.0 425250.0 646540.0 625460.0 595180.0 572230.0 768400.0 834170.0 385000.0 True False 467343.0123605883 527508.7630339131 452662.2954240574 707986.9672106615 674680.1436194034 591465.2608491892 630076.5928266183 765734.5997459075 682705.7557144583 381589.199525468 1.2247280922567017 1.3823996163673027 1.186255522920915 1.8553642715545704 1.768079768658059 1.550005245391422 1.6511908450505446 2.0066988287355887 1.7891118421680936 1.0 18.541660812416616 -5.256183383217822 24.98251695832787 1.7015552976354262 1.276254912694697 0.3210818127314289 0.25856661061320496 459.7482432292095 2185244.0557450503 0.06750151339041087 0.11263730166399509 5.543915686581607e-06 5.256183383217822 -0.4253003849407293 S(ph)DSELEVKPAESLLR ddPTM_KYSE-520_SHP099_60min_R1 15 SDSELEVKPAESLLR 15 1 Q92539 Q92539 LPIN2 Phosphatidate phosphatase LPIN2 1 S(0.903)DS(0.097)ELEVKPAESLLR;S(0.815)DS(0.185)ELEVKPAESLLR;S(0.834)DS(0.166)ELEVKPAESLLR;S(0.966)DS(0.034)ELEVKPAESLLR;S(0.965)DS(0.035)ELEVKPAESLLR;S(0.984)DS(0.016)ELEVKPAESLLR;S(0.681)DS(0.317)ELEVKPAES(0.001)LLR;S(0.901)DS(0.099)ELEVKPAESLLR;S(0.887)DS(0.113)ELEVKPAESLLR;S(0.906)DS(0.094)ELEVKPAESLLR;S(0.968)DS(0.032)ELEVKPAESLLR;S(0.902)DS(0.098)ELEVKPAESLLR;S(0.971)DS(0.029)ELEVKPAESLLR;S(0.997)DS(0.003)ELEVKPAESLLR;S(0.997)DS(0.003)ELEVKPAESLLR 259.34 4.0018999999999994e-25 35252000000.0 14548170.0 13203140.0 12189230.0 12567180.0 12964590.0 12519510.0 12459730.0 13066420.0 15004520.0 13156230.0 True False 13741154.009042092 12568841.33608283 12974967.269257562 13761561.008739572 13984829.474573413 12441371.094213564 13719281.103646435 13021095.638745353 12280077.40116846 13039676.03759207 1.0537956594494933 0.9638921473085779 0.9950375478541063 1.055360652294304 1.0724828925393974 0.9541165791501527 1.0521182477306286 0.9985750873876658 0.9417471236069237 1.0 23.63640469139056 -7.528630283163781 23.650523643479403 0.9706360278928047 1.018999798487406 0.19956412235251975 0.04000977772261151 133.21115085619093 547729.2788448826 0.02658818934963259 0.010130779461844671 2.9605317079721207e-08 7.528630283163781 0.048363770594601285 S(ph)DSELVSK ddPTM_KYSE-520_SHP099_60min_R1 1 SDSELVSK 8 0 A0A0A0MS66;Q14693-6;Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7 A0A0A0MS66 LPIN1 Phosphatidate phosphatase LPIN1 1 S(0.996)DS(0.004)ELVSK 60.518 0.034287 186430000.0 274340.0 269070.0 242880.0 210220.0 315510.0 282260.0 281490.0 294440.0 318380.0 276830.0 True False 259121.81331676865 256143.47331769633 258536.43342174005 230199.2455950522 340338.84199366614 280498.3106409691 309945.75627765915 293418.65636281273 260570.2177066652 274377.5015704808 0.9443989096540653 0.9335440109031657 0.9422654260714901 0.838987323222344 1.2404036046892915 1.0223079845667156 1.12963254823589 1.0693976535369856 0.9496777841303111 1.0 18.065802662567723 -5.738828670389491 24.999999510720308 1.0727799382138172 0.918099758635514 0.47677720298171644 0.07881171915785419 205.78548553058772 227529.9587551868 0.022661586487343562 0.02923483861240442 1.824615372957194e-06 5.738828670389491 -0.15468017957830327 S(ph)DSIKFQHR ddPTM_KYSE-520_SHP099_60min_R1 1 SDSIKFQHR 9 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.586)DS(0.414)IKFQHR 77.74 0.009092900000000001 952870000.0 1691600.0 1845000.0 1722600.0 1758200.0 1779600.0 1451700.0 1659000.0 1564700.0 1981400.0 1479700.0 True False 1597763.5758790032 1756363.4305985393 1833641.5522574505 1925298.7993778952 1919644.3954610857 1442639.4018192254 1826707.9102797108 1559272.420903727 1621627.7070292954 1466591.0091891785 1.0894404546788712 1.19758229771882 1.2502746442385462 1.3127714456959056 1.3089159714148138 0.9836685161576199 1.24554691719379 1.0631951315219015 1.1057122925673946 1.0 20.484035169523686 -6.252182017415838 24.965946626199507 1.0939444116915735 1.2354212665136541 0.4170312007441973 0.08910723438407048 734.8399714919401 1981772.7428304509 0.030105135136371204 0.02969506836679871 5.595230503122762e-07 6.252182017415838 0.1414768548220806 S(ph)DSLLSFR ddPTM_KYSE-520_SHP099_60min_R1 5 SDSLLSFR 8 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.931)DS(0.069)LLSFR;S(0.962)DS(0.038)LLSFR;S(0.999)DS(0.001)LLSFR;S(0.989)DS(0.011)LLSFR;S(0.992)DS(0.008)LLSFR 186.78 6.9948e-06 751898000.0 855535.0 819018.0 700705.0 736817.0 821735.0 866761.0 738319.0 735509.0 961977.0 792026.0 True False 808076.7680832597 779671.1459089193 745873.5654676397 806843.8661478903 886400.8694674176 861351.2230903328 812955.4898190516 732957.6909480903 787306.2262667405 785009.2658269029 1.0293850063439165 0.9931999275035809 0.9501461930923338 1.0278144491683006 1.129159753972728 1.097249753075225 1.0355998651337077 0.9336930439617381 1.0029260297168823 1.0 19.58235015733742 -7.176827986092773 9.758545336486048 0.976297147360895 1.037985195262899 0.22491136644351917 0.04981335238278816 0.7658182797484133 84.1539653862879 0.026937193899546526 0.015537484313639221 6.655367075603103e-08 7.176827986092773 0.061688047902003884 S(ph)DSNFQVPNGGIPR ddPTM_KYSE-520_SHP099_60min_R1 1 SDSNFQVPNGGIPR 14 0 Q9P270;D6RIF6;H0Y9L2 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 S(0.999)DS(0.001)NFQVPNGGIPR 56.648 0.053644000000000004 216390000.0 369530.0 321920.0 302380.0 294830.0 324830.0 267330.0 258120.0 290660.0 365600.0 307030.0 True False 349031.43426020804 306454.47998822853 321871.8986251061 322850.55455612857 350392.27297011996 265661.4943089715 284213.28860843845 289651.7683005539 299216.25602599676 304309.9530657258 1.146960297367675 1.0070471796958924 1.057710716926788 1.0609267008969578 1.1514321810382626 0.8729964026237194 0.9339598844703354 0.9518313988172251 0.9832614839297456 1.0 18.21518199528813 -6.262031792202558 24.99994473339224 0.9444961749380151 1.0776619898965272 0.6418591581863328 0.050763513016668184 35.74807407400502 1508543.9230327085 0.017314182699517178 0.01618207160762755 5.469759204654047e-07 6.262031792202558 0.1331658149585121 S(ph)DSNQYIGELKDQIAELNHELR ddPTM_KYSE-520_SHP099_60min_R1 1 SDSNQYIGELKDQIAELNHELR 22 1 O60447;O60447-2 O60447 EVI5 Ecotropic viral integration site 5 protein homolog 1 S(0.522)DS(0.465)NQY(0.013)IGELKDQIAELNHELR 68.369 0.011439 44388000.0 22795.0 18918.0 21427.0 15823.0 18108.0 13832.0 14666.0 17801.0 24477.0 15171.0 True False 21530.51590929409 18009.150883503087 22808.218704412164 17326.813162641574 19532.996579573697 13745.669357280116 16148.582406366644 17739.252485784637 20032.59381495714 15036.59674285939 1.4318742650007252 1.1976879603461674 1.5168471359879607 1.152309492563187 1.2990304198221958 0.9141476354220703 1.073951950865166 1.179738526552472 1.332255839372048 1.0 13.876190456020703 -5.641489285706759 1.9164674696214785 1.118120722303463 1.3585883516834982 0.36840014141535415 0.14234124613010152 0.38525134617549595 2.894626414675585 0.047617085802524634 0.0683796284977389 2.2830252475229346e-06 5.641489285706759 0.24046762938003519 S(ph)DSPEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_KYSE-520_SHP099_60min_R1 1 SDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 31 0 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.5)DS(0.5)PEIPFQAAAGPSDGLDASSPGNSFVGLR 119.8 0.00013941 375130000.0 419140.0 451550.0 279880.0 221760.0 266270.0 395920.0 297920.0 349990.0 386860.0 396040.0 True False 395889.4686651245 429856.8602096314 297921.5126238334 242836.00372542476 287223.93413094146 393448.91642093274 328036.6610190062 348775.9663782799 316615.9759469835 392531.39371445717 1.0085549207131956 1.0950891243168341 0.7589749951071512 0.6186409739804741 0.7317221978425489 1.002337450510119 0.8356953514338092 0.8885301200443431 0.806600391756952 1.0 18.582448516326323 -4.758512979760725 24.9975529635587 0.8215867983330989 1.051822083797346 0.3814159767281706 0.11239846487409297 76.15660357255952 650503.2927658504 0.03072239509745959 0.07427511835585104 1.743761240888632e-05 4.758512979760725 0.2302352854642471 S(ph)DSSGGYNLSDIIQS(ph)PSSTGLLK ddPTM_KYSE-520_SHP099_60min_R1 1 SDSSGGYNLSDIIQSPSSTGLLK 23 0 E9PDR5;Q9P2D0-2;Q9P2D0 E9PDR5 IBTK Inhibitor of Bruton tyrosine kinase 2 S(0.249)DS(0.249)S(0.249)GGY(0.216)NLS(0.037)DIIQS(0.874)PS(0.032)S(0.041)T(0.053)GLLK 76.417 0.0080174 70689000.0 25390.0 26422.0 30824.0 31624.0 29218.0 21286.0 18758.0 28971.0 33605.0 22574.0 True False 23981.566086289822 25152.647459769443 32810.96436014378 34629.53545189772 31517.29037232079 21153.1461783592 20654.241700438135 28870.506362882228 27503.179113111655 22374.011922306236 1.0718491690075889 1.124190312721385 1.4664765744328672 1.5477570840736472 1.4086561892326057 0.9454337582286765 0.923135366699544 1.290358942470178 1.2292466460023554 1.0 14.4495363512553 -6.252016404480244 24.889243201725083 1.086126150914564 1.3330673353296534 0.33625538067095195 0.17246464271899628 868.2760507265646 2293410.0212655524 0.06447676846998356 0.06367198739168753 5.597364583319444e-07 6.252016404480244 0.24694118441508928 S(ph)DTVLFPAK ddPTM_KYSE-520_SHP099_60min_R1 6 SDTVLFPAK 9 0 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 S(1)DTVLFPAK;S(0.999)DT(0.001)VLFPAK;S(1)DTVLFPAK;S(0.999)DT(0.001)VLFPAK;S(0.999)DT(0.001)VLFPAK;S(0.999)DT(0.001)VLFPAK 219.72 5.0105e-09 2125360000.0 4910380.0 4561260.0 4174500.0 4252500.0 4497000.0 4412680.0 4260060.0 4386620.0 5224940.0 4418600.0 True False 4637991.43280015 4342130.22300916 4443594.949436162 4656656.321439255 4850888.315570083 4385138.827319469 4690708.438979021 4371403.839064802 4276222.606018802 4379454.641618784 1.0590340150402386 0.9914773820797406 1.0146457294494708 1.063295935796702 1.1076466620914798 1.0012979208978825 1.0710713599822075 0.9981616883350102 0.976428107139426 1.0 22.06231979649813 -7.412333179844111 6.1130718559010315 0.9879400266709597 1.0423369689453272 0.3436820038153702 0.03336921954512547 0.27973467772855953 13.219319766293873 0.019489393691904867 0.009128759608613403 3.869606644927424e-08 7.412333179844111 0.05439694227436753 S(ph)DVPLR ddPTM_KYSE-520_SHP099_60min_R1 1 SDVPLR 6 0 Q96RD9-4;Q96RD9-3;Q96RD9 Q96RD9-4 FCRL5 Fc receptor-like protein 5 1 S(1)DVPLR 85.265 0.029093 454540000.0 969670.0 883250.0 822650.0 700690.0 819780.0 891990.0 741300.0 852710.0 983210.0 956350.0 True False 915880.4721107794 840817.3442147222 875679.3352865378 767283.3669298689 884292.0220898455 886422.7595431092 816237.8383908075 849752.1480340108 804683.8487071125 947877.4830290424 0.9662435161810013 0.8870527671232381 0.9238317725284624 0.8094752546267204 0.932918059477473 0.9351659633378482 0.8611216670981924 0.8964788838727746 0.8489323389512962 1.0 19.854341071483283 -6.755600335384068 24.99813072512695 0.8930064647567079 0.9053336215778461 0.0 0.05444715578269873 1049.9131825382026 4494904.012408449 0.020555194483042508 0.015494552899970412 1.75549527393886e-07 6.755600335384068 0.012327156821138274 S(ph)DVPVYLK ddPTM_KYSE-520_SHP099_60min_R1 1 SDVPVYLK 8 0 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(1)DVPVYLK 53.493 0.059682000000000006 1329300000.0 388750.0 4304100.0 2421700.0 1275600.0 3779600.0 1612700.0 2430000.0 2601800.0 4823100.0 963550.0 True False 367185.2625460879 4097324.575414191 2577806.6568570007 1396832.6404768748 4077033.0170177175 1602634.541099308 2675648.1145145856 2592774.9630646827 3947346.6204567472 955013.6966305561 0.384481671667723 4.290330693549443 2.6992352737473007 1.4626310024716167 4.269083293152919 1.678127284198817 2.801685592525749 2.714908668024778 4.133287966846579 1.0 19.865161898600153 -6.933972376967297 24.99999938021623 2.806254423259914 2.5646999993938286 0.0 1.3299120375519744 505.9923545116505 191578.232116525 0.5289455960992985 0.3566150028988371 1.1642000752835004e-07 6.933972376967297 -0.24155442386608517 S(ph)DY(ph)DRS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SDYDRSR 7 1 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;C9JUL9;A0A087X0F4 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 3 S(1)DY(1)DRS(1)R 42.802 0.045698 321100000.0 147200.0 131460.0 163520.0 128350.0 141770.0 151250.0 120940.0 149060.0 168700.0 125910.0 True False 139034.5225640751 125144.46427451701 174060.76084125054 140548.34541016538 152926.4924390417 150305.99264666115 133165.79546065594 148542.94565086561 138068.33258092377 124794.53535649786 1.114107458046125 1.0028040403934317 1.3947787084107082 1.1262379799617344 1.2254261935603181 1.2044276796038005 1.0670803419416088 1.190300081862769 1.106365212118519 1.0 16.929195235666693 -8.448331175255278 0.7625844064533881 0.9982323864702848 1.1724992517366348 0.20385570167648326 0.09956803532471357 2.480194548073063 2.495128042289794 0.10481123004978199 0.03544588933458794 3.5617942194418336e-09 8.448331175255278 0.17426686526635005 S(ph)EAEDEDDEDYVPYVPLR ddPTM_KYSE-520_SHP099_60min_R1 7 SEAEDEDDEDYVPYVPLR 18 0 D6RGI7;A0A499FJW5;Q9UJV9;D6RD33 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 1 S(1)EAEDEDDEDYVPYVPLR;S(1)EAEDEDDEDYVPYVPLR;S(1)EAEDEDDEDYVPYVPLR;S(1)EAEDEDDEDYVPYVPLR;S(1)EAEDEDDEDYVPYVPLR;S(1)EAEDEDDEDYVPYVPLR;S(1)EAEDEDDEDYVPYVPLR 243.99 3.813e-23 3235950000.0 1648338.0 1401958.0 1417862.0 1281418.0 1543718.0 1474748.0 1361204.0 1377749.0 1740190.0 1549236.0 True False 1556901.4052596632 1334605.8332981388 1509259.6531794101 1403203.58144763 1665199.8240460772 1465543.550702007 1498807.7843908311 1372969.9102880352 1424215.36262002 1535510.9743273694 1.0139304969420124 0.8691607260461053 0.9829038531232519 0.9138349415329339 1.0844597348289993 0.9544337847171613 0.9760970839348015 0.8941452931584971 0.9275188431941346 1.0 20.55028739264486 -3.903275392784375 20.48119744407818 0.9557831859774132 6.582202676573344 0.08306899996512607 0.05789991009503646 1703.3504640877097 363215.5743977039 0.013877288490527799 3143.2706542576684 0.000124946647312552 3.903275392784375 5.62641949059593 S(ph)EAEEGEVR ddPTM_KYSE-520_SHP099_60min_R1 2 SEAEEGEVR 9 0 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0;Q9H4G0-4;H7C2K6 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 S(1)EAEEGEVR;S(1)EAEEGEVR 139.86 0.00042329 37246000.0 75479.0 54548.0 46231.0 54766.0 56773.0 48909.0 49126.0 47318.0 55864.0 48617.0 True False 71292.02940634392 51927.43220178278 49211.124232215385 59970.94417400171 61240.71210581725 48603.740789127616 54092.13550355707 47153.864902104244 45720.505816838886 48186.29120345367 1.4795085412432445 1.0776391148788178 1.0212681450090157 1.2445644326680072 1.2709156603741258 1.0086632437410752 1.1225627487114034 0.9785742733967575 0.9488280727768886 1.0 15.556335143725622 -6.744879615653614 1.1281106930178648 0.9712252448182305 1.2001771977091467 0.3866396181166093 0.12505262995729674 0.590033661046715 1.4990647854768429 0.08723579143646766 0.0503175655924934 1.7993696226309007e-07 6.744879615653614 0.2289519528909162 S(ph)EALS(ph)SVLDQEEAMEIK ddPTM_KYSE-520_SHP099_60min_R1 1 SEALSSVLDQEEAMEIK 17 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 S(0.991)EALS(0.901)S(0.108)VLDQEEAMEIK 91.914 0.0005889 0.0 53606.0 51240.0 45502.0 48282.0 48447.0 48332.0 45658.0 52052.0 63427.0 45664.0 True False 50632.368319088324 48778.353487191955 48435.13172577412 52870.70676348736 52259.50327427696 48030.34206015492 50273.556219138736 51871.44376102812 51910.2556645539 45259.4524860544 1.1187136727888933 1.077749526515413 1.0701660993512512 1.1681693847219692 1.1546649462977807 1.0612223396859322 1.1107857797137364 1.146090836538755 1.1469483790275365 1.0 15.465931511648026 S(ph)EDDSAKFDS(ph)NEEDSASVFSPSFGLK ddPTM_KYSE-520_SHP099_60min_R1 6 SEDDSAKFDSNEEDSASVFSPSFGLK 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 S(0.727)EDDS(0.277)AKFDS(0.996)NEEDSASVFSPSFGLK;S(0.994)EDDS(0.007)AKFDS(0.999)NEEDSASVFSPSFGLK;S(0.904)EDDS(0.097)AKFDS(0.999)NEEDSASVFSPSFGLK;S(0.856)EDDS(0.146)AKFDS(0.998)NEEDSASVFSPSFGLK;S(0.5)EDDS(0.5)AKFDS(1)NEEDSASVFSPSFGLK;S(0.86)EDDS(0.146)AKFDS(0.994)NEEDSASVFSPSFGLK 279.84 2.3898000000000002e-39 2886030000.0 3209540.0 3221680.0 2826410.0 2988000.0 3142290.0 3008160.0 3072840.0 3241350.0 3784130.0 3199870.0 True False 3031500.4181406354 3066905.656959729 3008604.911015898 3271978.621625043 3389570.3458155883 2989384.9576197024 3383472.6552284006 3230106.5133867743 3097027.382154422 3171521.6412611865 0.9558504595084931 0.9670139459430407 0.9486313673141127 1.0316746949025732 1.0687520784085498 0.9425711994924129 1.0668294396007747 1.0184721653364759 0.9765115085019123 1.0 21.5967437559325 -5.2584388393371215 24.740770145705238 1.017127423152366 0.9581501232916773 0.3489872026124693 0.03609005682405824 250.8892870546299 2068680.0379838187 0.00974829520128043 0.015995537126771858 5.515198661490037e-06 5.2584388393371215 -0.05897729986068867 S(ph)EDRRSS(ph)EEREAGEI ddPTM_KYSE-520_SHP099_60min_R1 1 SEDRRSSEEREAGEI 15 3 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 2 S(0.905)EDRRS(0.431)S(0.664)EEREAGEI 101.8 0.0021019000000000003 1242500000.0 770630.0 800050.0 677640.0 627740.0 685650.0 613520.0 561120.0 615720.0 896770.0 661030.0 True False 727881.6176871813 761614.397100468 721321.7586623352 687400.2208630877 739606.7541851514 609690.7941063106 617843.4856034674 613584.211030129 733939.1737320393 655173.7884735578 1.1109748749000175 1.1624616407119988 1.1009624795016462 1.0491876093892767 1.1288710983208103 0.9305787332041857 0.9430222888539794 0.9365213044613317 1.1202205989375602 1.0 19.321518114694673 -6.253434530527311 24.968359587779627 0.9794107724478383 1.1094436067387425 0.5406263318591237 0.05717772591914463 464.886178033066 1450052.6366840138 0.019391946134756526 0.019060600708457776 5.579117004508779e-07 6.253434530527311 0.1300328342909043 S(ph)EEEQSSSSVK ddPTM_KYSE-520_SHP099_60min_R1 2 SEEEQSSSSVK 11 0 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 S(1)EEEQSSSSVK;S(1)EEEQSSSSVK 194.12 6.3528e-07 63896000.0 135807.0 120671.0 98153.0 118184.0 125285.0 121211.0 120912.0 129132.0 134844.0 115771.0 True False 128273.51498545724 114873.78402913632 104480.09943035276 129416.17182668473 135144.21672586122 120454.47718806253 133134.9649474023 128684.07123163536 110359.72874061677 114745.35900847509 1.1178971950925087 1.001119217559394 0.9105387819880005 1.1278553916688348 1.177775013243712 1.049754676170962 1.1602644856213222 1.1214751720122358 0.961779454038447 1.0 16.808076278003043 -3.9127671565351245 17.88321772490961 1.0646577789413891 3.0518320348629207 0.037486511070578876 0.08481438595933315 584.8190469632219 127717.86404991691 0.021549557761916846 3040.016829613237 0.00012224548937787676 3.9127671565351245 1.9871742559215315 S(ph)EEHS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 SEEHSPPR 8 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 2 S(1)EEHS(1)PPR;S(1)EEHS(1)PPR 89.805 0.0042843000000000004 0.0 708860.0 680730.0 663550.0 602250.0 660050.0 687950.0 630020.0 704860.0 763000.0 629860.0 True False 669538.1227226232 648026.7090034385 706323.4947175379 659487.6589269355 711992.179829226 683656.2488679049 693708.5700026675 702415.0051755607 624458.4336647576 624279.9304236651 1.0724966318687257 1.0380386705106117 1.131421114624323 1.0563973416210526 1.14050147238601 1.0951116887642764 1.1112139541821966 1.1251603182227394 1.0002859346142545 1.0 19.251833560696276 -7.77235528683512 24.980607174740456 1.0001428634190483 1.0961235932069202 0.6015477195354704 0.03130095242068539 159.0724794932838 364018.44810828345 0.02902242904326233 0.007786020473187923 1.689058584330106e-08 7.77235528683512 0.09598072978787187 S(ph)EEKEAGEI ddPTM_KYSE-520_SHP099_60min_R1 2 SEEKEAGEI 9 1 B8ZZ08;Q9NQ29-3;Q9NQ29 B8ZZ08 LUC7L Putative RNA-binding protein Luc7-like 1 1 S(1)EEKEAGEI;S(1)EEKEAGEI 63.408 0.053286 453930000.0 1191040.0 1083360.0 964880.0 965710.0 1118580.0 926060.0 966380.0 1095780.0 1239090.0 993690.0 True False 1124970.636920623 1031313.7594434869 1027077.7086625854 1057490.7880487002 1206605.8821504076 920280.1160354858 1064071.1213599218 1091978.9949369747 1014102.4909169931 984886.6796791216 1.1422335788794922 1.0471395143444233 1.0428384603568908 1.0737182356788837 1.225121536361445 0.9344020332728179 1.0803995457696702 1.1087356723036847 1.029664134809286 1.0 19.90959821314803 -6.275120613425379 24.999960031994874 1.0405462261831526 1.097602797736908 0.23515267461278333 0.06605769192911828 1671.7962926491725 3054893.179810299 0.023711907349565645 0.021056169385319054 5.307370260544978e-07 6.275120613425379 0.05705657155375543 S(ph)EGEGKPQGEGKPASQAKPESQPR ddPTM_KYSE-520_SHP099_60min_R1 1 SEGEGKPQGEGKPASQAKPESQPR 24 3 Q969E4 Q969E4 TCEAL3 Transcription elongation factor A protein-like 3 1 S(1)EGEGKPQGEGKPASQAKPESQPR 154.27 3.9851999999999994e-07 948260000.0 260100.0 229970.0 255160.0 232420.0 251710.0 225950.0 228460.0 252240.0 323750.0 200740.0 True False 245671.73450350497 218921.8960079927 271608.02187043504 254509.12692037894 271518.1449660094 224539.76223810302 251554.96635473357 251365.0383132586 264965.161073349 198961.59977335684 1.234769597667877 1.1003223549537864 1.3651278547208705 1.2791871758685995 1.3646761248165673 1.1285582870960178 1.2643392827625402 1.263384686289194 1.3317402020047024 1.0 17.602130487304358 -6.268629599455289 24.985288242815262 1.2182369689045216 1.2653825950514541 0.07984347599646857 0.10995330672363096 2265.9788845468174 7874019.904657757 0.038356752727481264 0.03443768938447695 5.387290572127563e-07 6.268629599455289 0.04714562614693252 S(ph)EGFSMDR ddPTM_KYSE-520_SHP099_60min_R1 2 SEGFSMDR 8 0 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7ERA4 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 S(1)EGFSMDR;S(1)EGFSMDR 88.49600000000001 0.011866 918430000.0 2564600.0 2648100.0 2476000.0 2375800.0 2792400.0 2591000.0 2622400.0 2915700.0 3427700.0 2651900.0 True False 2422336.5255966485 2520881.3011208638 2635606.9217400732 2601595.3176896833 3012145.993417366 2574828.607917349 2887497.784157633 2905586.1172294924 2805316.0852853097 2628406.229146982 0.9215989898117039 0.9590912063615774 1.0027395660964584 0.9897995556546828 1.1459971293687436 0.9796159282246789 1.0985736345232813 1.1054554980918858 1.0673068927384721 1.0 21.325756835655774 -5.0075391846233215 1.0649973348172705 1.0686267882047589 0.918243710910427 0.4834275390971172 0.049655165012135315 0.5669411734030474 1.072091250472565 0.017156241924096195 0.07351058935446916 9.827901958406456e-06 5.0075391846233215 -0.15038307729433187 S(ph)EGSEYEEIPK ddPTM_KYSE-520_SHP099_60min_R1 1 SEGSEYEEIPK 11 0 P48634 P48634 PRRC2A Protein PRRC2A 1 S(0.976)EGS(0.023)EY(0.001)EEIPK 80.318 0.013725999999999999 0.0 587390.0 504290.0 503760.0 579350.0 547580.0 540830.0 626560.0 670500.0 704250.0 651750.0 True False 554806.3057670657 480063.1514452776 536233.175644499 634411.2498120714 590671.4306959899 537454.4793592981 689898.7994363216 668174.1919958757 576375.9526977804 645976.0020538273 0.8588651962350071 0.7431594206579757 0.8301131527171133 0.9820972416854703 0.9143860279917503 0.8320037859773521 1.0679944723067814 1.0343637996945259 0.8922559829858087 1.0 19.301121044369907 -5.377909028683182 0.7175708286901457 0.9844835611218438 0.7750013388062932 0.4365726806259075 0.07380198403400696 0.9229784197691684 0.873892057982371 0.04117265351621919 0.12551270799749795 4.188812986585456e-06 5.377909028683182 -0.20948222231555058 S(ph)EKYSISR ddPTM_KYSE-520_SHP099_60min_R1 2 SEKYSISR 8 1 E9PE96;Q9Y6V0-6;Q9Y6V0 E9PE96 PCLO Protein piccolo 1 S(0.494)EKY(0.011)S(0.494)ISR;S(0.499)EKY(0.001)S(0.499)ISR 63.426 0.048157 255300000.0 31361.0 19089.8 19516.9 21198.5 21711.5 20462.8 18762.6 25408.0 24583.0 16558.0 True False 29621.342813396433 18172.69735362603 20774.99060214411 23213.19906643856 23420.071528463377 20335.084074909755 20659.3067133298 25319.865578271772 20119.346886999687 16411.30900192906 1.8049348050124827 1.1073277184342778 1.265894792408218 1.4144635911559507 1.427069073265909 1.239089707744792 1.2588457575749386 1.5428303479811123 1.225944066048282 1.0 14.002402695504944 -12.450110374662865 0.29478015293930393 3.4658310420932756e-13 1.3795375288920888 0.26971005577769946 0.18608161944746462 132.45159935415504 2.8840671970704816 81.15324023408854 0.19087190542271448 3.5472322591406656e-13 12.450110374662865 1.3795375288917422 S(ph)ELEFETLK ddPTM_KYSE-520_SHP099_60min_R1 6 SELEFETLK 9 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 S(1)ELEFETLK;S(1)ELEFETLK;S(1)ELEFETLK;S(1)ELEFETLK;S(1)ELEFETLK;S(1)ELEFETLK 247.22 3.1053000000000004e-13 2176400000.0 2453410.0 1936430.0 1616270.0 2113400.0 2304180.0 2282710.0 2373870.0 2507590.0 2345760.0 2551550.0 True False 2317314.456548416 1843400.9961593102 1720457.350323435 2314256.9005831224 2485505.8570091734 2268462.7601617198 2613843.9463385763 2498891.7555659073 1919829.1157974373 2528945.252075861 0.9163165768995079 0.7289208790289832 0.6803062853619364 0.9151075527172785 0.9828231176491341 0.8969995527976231 1.0335707916938996 0.988116193308145 0.7591422211380667 1.0 21.270104374449645 -5.4050106707103005 6.183579337373261 0.9453073405439157 0.7715272251008973 0.41002968890472613 0.0906772019759876 0.22312781646241484 10.485366135635802 0.025574271970869644 0.03808176360543925 3.93540405963236e-06 5.4050106707103005 -0.1737801154430184 S(ph)ELEFETLKTPDIDVPK ddPTM_KYSE-520_SHP099_60min_R1 1 SELEFETLKTPDIDVPK 17 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 S(0.366)ELEFET(0.336)LKT(0.298)PDIDVPK 65.097 0.01554 101620000.0 98900.0 83645.0 71074.0 77228.0 71475.0 129360.0 83399.0 126550.0 106940.0 123640.0 True False 93413.81984773785 79626.56864629527 75655.54376242076 84567.7259005551 77099.67586287997 128552.61625634438 91829.78481580334 126111.02758699213 87522.39173801993 122544.6457904645 0.7622839761393035 0.6497759908861821 0.6173712712979884 0.6900972731616114 0.6291558098320382 1.0490267887848215 0.7493577889385751 1.0291027141457136 0.7142082069229846 1.0 16.90294792591785 -6.243439133901399 24.99298590013364 0.9002216921453862 0.6668498472560339 0.5421598907601555 0.1094890603128101 616.2520834853098 855654.4550439474 0.033268868433186105 0.033201878090414916 5.709010819930738e-07 6.243439133901399 -0.23337184488935225 S(ph)ELPQDVYTIK ddPTM_KYSE-520_SHP099_60min_R1 3 SELPQDVYTIK 11 0 E9PFR3;Q14738;H0Y8C4;Q14738-2;Q14738-3 E9PFR3 PPP2R5D Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform 1 S(1)ELPQDVYTIK;S(1)ELPQDVYTIK;S(1)ELPQDVYTIK 179.46 4.4499e-06 787170000.0 1299030.0 1247960.0 1126350.0 1142190.0 1135480.0 1008140.0 1020960.0 1218870.0 1375250.0 1328970.0 True False 1226970.2163478963 1188006.1283738494 1198956.3232237198 1250743.394188054 1224835.8160025603 1001847.8243094556 1124168.6004093878 1214642.024456396 1125539.267231269 1317196.359723015 0.9315013720550429 0.9019202942708313 0.9102335535423443 0.9495496893500867 0.9298809603908437 0.7605910970784401 0.8534555930945499 0.9221419536201995 0.8544961872411732 1.0 20.329038999263474 S(ph)EPDDELLFDFLNSSQK ddPTM_KYSE-520_SHP099_60min_R1 10 SEPDDELLFDFLNSSQK 17 0 Q8TBA6-2;Q8TBA6 Q8TBA6-2 GOLGA5 Golgin subfamily A member 5 1 S(1)EPDDELLFDFLNSSQK;S(1)EPDDELLFDFLNSSQK;S(1)EPDDELLFDFLNSSQK;S(1)EPDDELLFDFLNSSQK;S(1)EPDDELLFDFLNSSQK;S(1)EPDDELLFDFLNSSQK;S(1)EPDDELLFDFLNSSQK;S(1)EPDDELLFDFLNSSQK;S(1)EPDDELLFDFLNSSQK;S(1)EPDDELLFDFLNSSQK 326.53 6.3273e-48 889600700.0 892919.0 840555.0 691076.0 902765.0 889369.0 916805.0 974037.0 1121488.0 1156375.0 920182.0 True False 843387.0030801033 800173.4761012236 735623.8647206954 988563.5141738051 959357.2804825994 911082.8799234527 1072502.1656450382 1117597.819885267 946406.4498415259 912029.9033707633 0.9247361297727593 0.8773544300947475 0.8065786680918132 1.0839156814049429 1.0518923523635786 0.9989616311440991 1.1759506587242228 1.2253960267692396 1.0376923457703642 1.0 19.79872160226701 -5.273375059271857 24.110811311667884 1.0905678014163371 0.8703362164099797 0.6379820936518882 0.07312495460854919 285.495234543947 576717.7791088352 0.021836295222828088 0.032703243733166854 5.328745031587828e-06 5.273375059271857 -0.22023158500635742 S(ph)EPDDELLFDFLNSSQKEPTGR ddPTM_KYSE-520_SHP099_60min_R1 12 SEPDDELLFDFLNSSQKEPTGR 22 1 Q8TBA6-2;Q8TBA6 Q8TBA6-2 GOLGA5 Golgin subfamily A member 5 1 S(1)EPDDELLFDFLNSSQKEPTGR;S(1)EPDDELLFDFLNSSQKEPTGR;S(1)EPDDELLFDFLNSSQKEPTGR;S(1)EPDDELLFDFLNSSQKEPTGR;S(1)EPDDELLFDFLNSSQKEPTGR;S(1)EPDDELLFDFLNSSQKEPTGR;S(1)EPDDELLFDFLNSSQKEPTGR;S(1)EPDDELLFDFLNSSQKEPTGR;S(1)EPDDELLFDFLNSSQKEPTGR;S(1)EPDDELLFDFLNSSQKEPTGR;S(1)EPDDELLFDFLNSSQKEPTGR;S(1)EPDDELLFDFLNSSQKEPTGR 194.77 6.0303e-14 1618348000.0 681808.0 754241.0 626156.0 636175.0 679493.0 660780.0 583438.0 710210.0 1022823.0 622446.0 True False 643986.751089449 718006.1302211779 666519.0176450226 696636.880727011 732965.2333136881 656655.8269161046 642417.6068461575 707746.4472742596 837104.1264695803 616931.6126956603 1.0438543557130624 1.1638342329125853 1.0803774744702932 1.1291962778225635 1.1880818201405225 1.0643899800285332 1.0413108902608135 1.1472040542415831 1.356883176746097 1.0 19.23475104891198 -7.52783199635169 24.999583322789093 1.2029755792883 1.1052689145439951 0.09124011417442568 0.09268229328618781 253.38987397985758 1278836.9411464063 0.057810260973649594 0.022018233472714553 2.96597853476082e-08 7.52783199635169 -0.09770666474430478 S(ph)EPFLTWL ddPTM_KYSE-520_SHP099_60min_R1 1 SEPFLTWL 8 0 Q9GZV5 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 1 S(1)EPFLTWL 60.151 0.035342 20106000.0 9853.6 7689.6 5421.5 5815.2 7318.9 7146.8 8609.1 8002.8 7950.1 7192.1 True False 9307.001165335383 7320.180073675083 5770.978564706703 6367.874859596366 7894.855791155399 7102.194170229143 9479.391844719155 7975.040154667564 6506.562245711917 7128.383589369134 1.3056257493234953 1.026906027418612 0.8095774437999117 0.8933125974159208 1.107523983828443 0.9963260367779523 1.3298094478047142 1.118772587737995 0.912768254421021 1.0 12.799359257266955 -5.813727989526116 24.997362008975166 1.0920255889308965 0.9959096212855872 0.03628368338587429 0.15792017750653708 292.894592632627 140020.74623743384 0.05158405350764443 0.05849088605058891 1.5355784563199226e-06 5.813727989526116 -0.09611596764530927 S(ph)EPS(ph)KPARRLSESLHVVDENK ddPTM_KYSE-520_SHP099_60min_R1 1 SEPSKPARRLSESLHVVDENK 21 3 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 2 S(0.893)EPS(0.513)KPARRLS(0.468)ES(0.125)LHVVDENK 53.773 0.068194 0.0 15016.0 18765.0 17352.0 10203.0 13293.0 18953.0 11809.0 17489.0 26631.0 15514.0 True False 14183.032546346121 17863.501233160765 18470.53768418162 11172.690052356189 14339.083473176126 18834.707296741628 13002.768964733654 17428.33474096329 21795.481712878347 15376.558029709355 0.9223801919091906 1.1617360139145794 1.2012140589912468 0.7266053970445929 0.9325288172731048 1.2248974874839165 0.845622859134713 1.1334353700801998 1.4174486689912569 1.0 13.908444978479647 -7.518734646187036 24.960079658258884 1.2309635845130429 1.0096783676356746 0.18518702854313795 0.1774443923212061 278.0594693183993 1674821.9628639852 0.11290840710460714 0.04488523885622613 3.028763436520794e-08 7.518734646187036 -0.22128521687736824 S(ph)ES(ph)PKEPEQLRK ddPTM_KYSE-520_SHP099_60min_R1 2 SESPKEPEQLRK 12 2 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 2 S(1)ES(1)PKEPEQLRK;S(1)ES(1)PKEPEQLRK 90.367 0.0021295999999999997 2019350000.0 1691560.0 1629750.0 1361020.0 1368060.0 1412420.0 1523860.0 1520550.0 1536290.0 1664750.0 1540030.0 True False 1597725.7947587422 1551454.3636953766 1448753.526908995 1498080.011077763 1523569.4184295055 1514349.0244928345 1674262.033137923 1530960.9685627823 1362473.3649323813 1526386.5323252084 1.0467373505483304 1.0164229904020323 0.9491393537795751 0.981455207676443 0.9981543902307554 0.9921137224566331 1.096879458565092 1.0029969055286445 0.8926135916941489 1.0 20.54168891659172 -4.52370927436694 24.98771245339951 0.9925739966948235 1.0391587781898304 0.12108713610484434 0.048098313458321836 55.10763237665223 1658076.5930937692 0.012769600962358822 0.03442699104920612 2.9942683905259528e-05 4.52370927436694 0.04658478149500689 S(ph)ESELIDELSEDFDR ddPTM_KYSE-520_SHP099_60min_R1 4 SESELIDELSEDFDR 15 0 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;D6RC54;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 1 S(1)ESELIDELSEDFDR;S(0.999)ES(0.001)ELIDELSEDFDR;S(1)ESELIDELSEDFDR;S(1)ESELIDELSEDFDR 458.57 7.661599999999998e-132 2133902000.0 727219.0 595955.0 484724.0 585151.0 602696.0 704553.0 677374.0 840843.0 941059.0 845091.0 True False 686878.7123948645 567324.427253308 515970.0846258217 640763.5751079363 650124.7463288468 700155.6233863346 745849.5744531708 837926.3118872312 770186.4077668735 837604.1512108488 0.8200517050947108 0.6773180701566226 0.6160070767079296 0.7649957013484736 0.7761718293647663 0.8359027619122741 0.8904559192728012 1.0003846216329237 0.9195112114158991 1.0 19.675909066796823 -6.538557747134619 1.0032171022862308 0.9793019425188849 0.7053603755995113 0.7929141620419049 0.05497833137135854 0.2359131959622361 0.48757557509078525 0.03686544920190923 0.025687956621115563 2.89362503284346e-07 6.538557747134619 -0.27394156691937366 S(ph)ESELIDELSEDFDRSECK ddPTM_KYSE-520_SHP099_60min_R1 8 SESELIDELSEDFDRSECK 19 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;D6RC54;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 1 S(0.992)ES(0.008)ELIDELSEDFDRSECK;S(0.957)ES(0.043)ELIDELSEDFDRSECK;S(0.999)ES(0.001)ELIDELSEDFDRSECK;S(0.883)ES(0.117)ELIDELSEDFDRSECK;S(0.5)ES(0.5)ELIDELSEDFDRSECK;S(0.5)ES(0.5)ELIDELS(0.001)EDFDRSECK;S(0.99)ES(0.01)ELIDELSEDFDRSECK;S(1)ESELIDELSEDFDRSECK 213.72 9.5151e-19 677216000.0 372459.0 400829.0 359388.0 307001.0 386528.0 384573.0 308678.0 406906.0 676785.0 415519.0 True False 351797.95679139096 381572.5731834051 382554.72552113165 336178.2827367838 416945.5545565199 382172.737256889 339882.1846469687 405494.538058574 553897.9043614718 411837.82492889004 0.8542147794514361 0.9265117240003132 0.9288965276251288 0.8162880201565507 1.012402283905107 0.9279690065449351 0.8252816134740766 0.9845976098202944 1.3449417970705109 1.0 18.65171681371075 -7.562771033982666 9.082701338324807 1.1713071385646852 0.9034187455754271 0.5669804960898 0.09449134113922579 0.2130131289387963 44.702419541301644 0.0588315508330707 0.022205376396860835 2.736711177763906e-08 7.562771033982666 -0.26788839298925804 S(ph)ESETSTMAAK ddPTM_KYSE-520_SHP099_60min_R1 2 SESETSTMAAK 11 0 Q96B23;A0A087WVF1;Q96B23-2 Q96B23 C18orf25 Uncharacterized protein C18orf25 1 S(0.989)ES(0.011)ETSTMAAK;S(0.999)ES(0.001)ETSTMAAK 132.56 0.00058037 807230000.0 3115500.0 3081600.0 2843500.0 2951600.0 3025100.0 3044200.0 2878700.0 3145100.0 3652400.0 3130000.0 True False 2942677.004404723 2933555.3104241015 3026796.559760859 3232119.176569105 3263158.1595354807 3025200.0186113487 3169707.0894045867 3134190.3821718586 2989216.2295113564 3102270.6351031535 0.9485558645681718 0.9456155363204016 0.9756713439220027 1.0418559683338633 1.0518612150119449 0.9751567075999988 1.0217377728230312 1.0102891561772605 0.9635575296647071 1.0 21.564893118654332 -5.008061743510238 4.679414150082304 1.0106083824449361 0.9489585152211109 0.4955213166405663 0.025341260001292564 0.1545037921971256 9.099038134235716 0.007120010372264527 0.01417084682603711 9.816083781441183e-06 5.008061743510238 -0.06164986722382526 S(ph)ESGGLGVSMVEYVLSS(ph)SPGDSCLR ddPTM_KYSE-520_SHP099_60min_R1 1 SESGGLGVSMVEYVLSSSPGDSCLR 25 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 2 S(0.455)ES(0.456)GGLGVS(0.086)MVEY(0.003)VLS(0.11)S(0.472)S(0.386)PGDS(0.032)CLR 62.06399999999999 0.020638999999999998 12106000.0 6422.2 10197.0 11391.0 11395.0 8797.7 9813.4 7266.1 8801.8 10886.0 8616.1 True False 6065.9477636616975 9707.120813990961 12125.282086244408 12477.977373968331 9490.028937934378 9752.150930504102 8000.628298302247 8771.26861015556 8909.376813728126 8539.768057224364 0.710317624906698 1.136696072884445 1.419860821159752 1.4611611568785374 1.1112747880671212 1.1419690634635096 0.9368671660272994 1.0271085293394302 1.0432808893669054 1.0 13.059981170990714 -6.533392917733531 2.8686776898232167 1.004861207549216 1.195211541777109 0.13310623578483882 0.1937356030498367 0.5443783238475569 9.128318039471534 0.08559466075303124 0.06719993844949086 2.928242787566236e-07 6.533392917733531 0.19035033422789294 S(ph)ESGGLGVSMVEYVLSSS(ph)PGDSCLR ddPTM_KYSE-520_SHP099_60min_R1 1 SESGGLGVSMVEYVLSSSPGDSCLR 25 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 2 S(0.427)ES(0.427)GGLGVS(0.145)MVEY(0.001)VLS(0.058)S(0.228)S(0.711)PGDS(0.003)CLR 77.575 0.0012651 0.0 6557.3 10769.0 9321.2 9274.2 11216.0 10292.0 6338.2 9688.4 11246.0 8512.6 True False 6193.553497346523 10251.641075401458 9922.059466447316 10155.617179610095 12098.63538968957 10227.763810376446 6978.927110870927 9654.793201689565 9204.00988858961 8437.184986702583 0.7340781916134193 1.2150546765963466 1.1759916941592448 1.2036736418148761 1.4339658794678098 1.2122246728613753 0.8271629840841535 1.1443145097453702 1.090886344568192 1.0 13.042546017818877 S(ph)ESNEDLFGLVPFDEITGSQQQK ddPTM_KYSE-520_SHP099_60min_R1 1 SESNEDLFGLVPFDEITGSQQQK 23 0 H0Y9P1;Q9NSY1 H0Y9P1 BMP2K BMP-2-inducible protein kinase 1 S(0.5)ES(0.5)NEDLFGLVPFDEITGSQQQK 166.38 3.4362e-12 32541000.0 41394.0 45004.0 36253.0 31881.0 35989.0 38430.0 26407.0 38093.0 46668.0 36297.0 True False 39097.7923031068 42841.94028761881 38589.92638685089 34910.960654627816 38821.12955060076 38190.14411511528 29076.477267484242 37960.86427397306 38194.26760454382 35975.436818638686 1.0867913154247077 1.190866437664007 1.0726742966706009 0.9704110287978666 1.0791009917769152 1.0615616512911712 0.8082313889353492 1.055188418290608 1.0616762708703393 1.0 15.134724584020452 -5.006975066113039 5.167050408911156 1.0053950530562334 1.1386581136445812 0.32647412091063466 0.07735948456900049 0.1969798238954765 16.325242957863818 0.02137416974646364 0.04208189209656204 9.84067601818597e-06 5.006975066113039 0.1332630605883478 S(ph)ESPKEPEQLRK ddPTM_KYSE-520_SHP099_60min_R1 1 SESPKEPEQLRK 12 2 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.55)ES(0.45)PKEPEQLRK 102.29 0.00071485 55090000000.0 12889000.0 11333000.0 10972000.0 9105600.0 10520000.0 10191000.0 9319500.0 9408900.0 14140000.0 9806000.0 True False 12174021.476415511 10788545.668820197 11679272.675820712 9970993.48630153 11347864.14938787 10127394.188840484 10261606.009555021 9376262.721953776 11572532.440392768 9719126.468952565 1.2525839143368522 1.1100324399815 1.201679257197627 1.025914573511678 1.16758066536517 1.0420066269527533 1.0558156684487428 0.9647227816106667 1.190696764504593 1.0 23.212395223120037 -1.0000000000029858 0.3193256183178998 1.038725337875546 2.9178247079548494 0.3893561033880425 0.07230134846214945 56.855337068104795 0.8121953538095237 0.06415982611082625 62.34657475941601 0.09999999999931249 1.0000000000029858 1.8790993700793033 S(ph)ESSDFEVVPK ddPTM_KYSE-520_SHP099_60min_R1 1 SESSDFEVVPK 11 0 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.961)ES(0.021)S(0.019)DFEVVPK 75.819 0.018109 89860000.0 363450.0 375720.0 371640.0 330110.0 358790.0 291310.0 300920.0 371420.0 498430.0 350950.0 True False 343288.7039803874 357669.84723278234 395596.50904502394 361483.55514880916 387024.7317641514 289491.82623404235 331339.9302961848 370131.6307100795 407927.6763978055 347840.8560349688 0.9869131185264685 1.0282571498640327 1.137291672848385 1.0392210945814508 1.1126488595268504 0.832253662016458 0.9525618527769344 1.0640832561453615 1.1727422737161046 1.0 18.40806787038582 -11.725042016095674 2.031339840254018 0.0004038543044451391 1.0336539913843985 0.012778702314561352 0.09307809190033905 2209823.9971241443 488984.2769587315 10246003.447214881 0.025429731083503194 1.8834668634763834e-12 11.725042016095674 1.0332501370799534 S(ph)ET(ph)PPHWR ddPTM_KYSE-520_SHP099_60min_R1 4 SETPPHWR 8 0 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 2 S(1)ET(1)PPHWR;S(1)ET(1)PPHWR;S(1)ET(1)PPHWR;S(1)ET(1)PPHWR 117.09 0.0012472000000000002 2665510000.0 2365700.0 2189740.0 1872360.0 2078140.0 2079230.0 2109410.0 2028940.0 2138590.0 2464050.0 2079460.0 True False 2234469.9050939656 2084541.6035332507 1993055.3214819222 2275645.800784428 2242853.5717995944 2096244.3897440913 2234045.055746185 2131171.730440657 2016640.63364567 2061037.6021953982 1.0841480537345989 1.011403965319612 0.9670155068296368 1.1041262897680426 1.0882157459963504 1.0170820694931482 1.0839419200147058 1.034028553467706 0.9784589235526625 1.0 20.974939395407535 -7.64756422975311 4.972057808883541 0.9900001530371194 1.0489380371649817 0.2621606079877469 0.04057223888770957 0.30398898208870495 11.601498213015063 0.030991523134257626 0.010842266941037971 2.2513124354581453e-08 7.64756422975311 0.05893788412786227 S(ph)ETEDSILHQLFIVR ddPTM_KYSE-520_SHP099_60min_R1 1 SETEDSILHQLFIVR 15 0 Q9UKG1 Q9UKG1 APPL1 DCC-interacting protein 13-alpha 1 S(0.499)ET(0.499)EDS(0.003)ILHQLFIVR 100.43 0.0007916 15624000.0 8707.6 6594.4 7125.2 11217.0 8829.1 7897.4 6616.4 6241.6 7925.4 7018.0 True False 8224.572069829754 6277.595125603803 7584.501792723083 12283.060307485983 9523.899939292809 7848.109397208215 7285.2502818412795 6219.94934640039 6486.347143075587 6955.825979921383 1.1824004932801253 0.9024945626478647 1.0903811875996365 1.7658665330245669 1.369197557095937 1.1282785710658214 1.0473594800776802 0.8942071530188985 0.9325056667316018 1.0 12.764006124574431 -6.740537174573693 2.4274141707180634 0.943015167501783 1.2578372069245525 0.3027378118289106 0.21057375856844698 0.4179643460028579 5.036328450070766 0.11109559780415929 0.07475060397901134 1.817451479917383e-07 6.740537174573693 0.31482203942276943 S(ph)EVLAEESIVCLQK ddPTM_KYSE-520_SHP099_60min_R1 3 SEVLAEESIVCLQK 14 0 O43663-2;O43663-4;O43663-3;O43663;H0YLA0;H0YM42 O43663-2 PRC1 Protein regulator of cytokinesis 1 1 S(1)EVLAEESIVCLQK;S(1)EVLAEESIVCLQK;S(1)EVLAEESIVCLQK 266.15 8.9131e-25 247331000.0 184541.0 202748.0 167016.0 162916.0 166100.0 159758.0 159888.0 171079.0 216651.0 183353.0 True False 174304.14285663707 193007.68174904783 177782.11859504844 178399.48765751836 179171.12502027786 158760.89106277886 176051.03939650566 170485.5668791389 177312.63972726563 181728.6350664756 0.9591451715514031 1.0620653243691969 0.9782834638581667 0.9816806668484609 0.98592676357657 0.8736151625455436 0.968757836826909 0.9381326548607817 0.9757000577394167 1.0 17.47142623805661 -5.672607023197356 1.8729015726418994 0.9487769517890198 1.0049465539469058 0.190636044675916 0.04047194159150357 0.46369491529637746 3.340398255222499 0.013393622317963727 0.018854359708701668 2.1251665758441924e-06 5.672607023197356 0.05616960215788602 S(ph)FADIGK ddPTM_KYSE-520_SHP099_60min_R1 5 SFADIGK 7 0 Q9Y6M7-7;Q9Y6M7-13;Q9Y6M7-6;Q9Y6M7-14;Q9Y6M7;Q9Y6M7-9;Q9Y6M7-2;Q9Y6M7-3;Q9Y6M7-11;C9JRP1;Q9Y6M7-4;Q6U841-4;E7EW28;F8WDX9;Q6U841;Q6U841-3;Q6U841-2;C9J240 Q9Y6M7-7 SLC4A7;SLC4A10 Sodium bicarbonate cotransporter 3;Anion exchange protein;Sodium-driven chloride bicarbonate exchanger 1 S(1)FADIGK;S(1)FADIGK;S(1)FADIGK;S(1)FADIGK;S(1)FADIGK 123.5 0.0023695 3229850000.0 5610270.0 5769220.0 4427710.0 5965870.0 5849900.0 5347940.0 5670810.0 7186180.0 8044340.0 4913070.0 True False 5299057.139304025 5492058.011424228 4713127.271186489 6532864.491095775 6310253.848622063 5314561.522742378 6244070.816572207 7161252.818847019 6583690.637308993 4869544.022110618 1.0882039704833066 1.1278382506631066 0.9678785631233839 1.3415762259120558 1.2958613414253508 1.0913879202264352 1.2822701239008052 1.4706208191836205 1.3520137835113788 1.0 22.21535525583337 -5.2673603410437595 24.993207667867377 1.276722120938458 1.0679600583906155 0.32418367756775557 0.1314549817350013 545.5185609980884 2302709.2548874514 0.037470027503602246 0.057301738033347094 5.403058365611946e-06 5.2673603410437595 -0.20876206254784258 S(ph)FAGNLNTYK ddPTM_KYSE-520_SHP099_60min_R1 4 SFAGNLNTYK 10 0 Q01813-2;Q01813;B1APP6 Q01813-2 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 S(1)FAGNLNTYK;S(1)FAGNLNTYK;S(1)FAGNLNTYK;S(1)FAGNLNTYK 203.93 7.0935e-07 19000000000.0 11488000.0 14455000.0 12103800.0 14586400.0 16327400.0 12492400.0 15135500.0 15790300.0 15985000.0 15088600.0 True False 10850737.739239775 13760560.10260267 12884030.314764738 15972687.070438927 17612273.489801824 12414430.297779514 16665544.048245078 15735527.13478372 13082526.949057894 14954926.742753165 0.7255627477077283 0.9201355740021088 0.8615241342461314 1.0680551864407457 1.177690388776819 0.830123110017592 1.1143848669349612 1.052196871670322 0.8747971270001309 1.0 23.834117507592534 -4.357937396781758 1.1591519891516031 1.0166957671171102 0.6394231359418782 0.39917215109839377 0.10494800411745961 1.383443938815786 1.7757294114320337 0.03256999669270608 0.6089836022280558 4.385939161968477e-05 4.357937396781758 -0.377272631175232 S(ph)FAGNLNTYKR ddPTM_KYSE-520_SHP099_60min_R1 2 SFAGNLNTYKR 11 1 Q01813-2;Q01813;B1APP6 Q01813-2 PFKP ATP-dependent 6-phosphofructokinase, platelet type 1 S(1)FAGNLNTYKR;S(1)FAGNLNTYKR 100.38 0.0016583 1873740000.0 1485250.0 2291250.0 2158240.0 1683670.0 1822170.0 1690900.0 1584100.0 1491420.0 2319480.0 1752970.0 True False 1402860.2217275302 2181174.910763634 2297363.603706097 1843685.4905861574 1965564.41227092 1680346.4658924907 1744236.2873261562 1486246.6121200465 1898320.9013325467 1737440.0495900244 0.8074294258720217 1.2553957825930833 1.3222692801677935 1.0611505651784665 1.1312991275495952 0.9671392496615893 1.0039116386995541 0.8554232489752663 1.092596490900785 1.0 20.72853176779265 -6.259201579711809 23.287545908211918 0.9760341658685845 1.1317471350892692 0.17908880769817304 0.13831779845683054 120.55020876319071 1254499.6785978249 0.046852239745928635 0.04465049347109823 5.505520958914725e-07 6.259201579711809 0.15571296922068467 S(ph)FDASDTLALPR ddPTM_KYSE-520_SHP099_60min_R1 6 SFDASDTLALPR 12 0 Q5JXC2 Q5JXC2 MIIP Migration and invasion-inhibitory protein 1 S(1)FDASDTLALPR;S(0.942)FDAS(0.054)DT(0.004)LALPR;S(0.997)FDAS(0.003)DTLALPR;S(1)FDASDTLALPR;S(0.98)FDAS(0.02)DTLALPR;S(1)FDASDTLALPR 279.38 1.5305000000000002e-22 1551670000.0 2204090.0 1981840.0 1741290.0 1740460.0 1805590.0 1888970.0 1803070.0 1933780.0 2128170.0 1856230.0 True False 2081824.7339555144 1886629.4315975148 1853536.3395625097 1905872.7951116194 1947679.660598216 1877180.2375521543 1985341.9118674155 1927072.1685276432 1741747.9747999068 1839785.2463250866 1.1315585545181939 1.0254617680873341 1.00747429259197 1.0359213386010897 1.058645113329746 1.0203257370944587 1.0791161174017858 1.0474440820617024 0.9467126547943537 1.0 20.811105943137107 S(ph)FDAVVFDVLK ddPTM_KYSE-520_SHP099_60min_R1 1 SFDAVVFDVLK 11 0 Q86X27;Q86X27-3;Q86X27-2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 S(1)FDAVVFDVLK 75.479 0.016836 181730000.0 17273.0 17931.0 21830.0 19429.0 21046.0 23677.0 18727.0 19398.0 25122.0 22637.0 True False 16314.832257128164 17069.567845020272 23237.196729234962 21275.526318458145 22702.200464640406 23529.223060462784 20620.107917907273 19330.712865527235 20560.478074083963 22436.453791319494 0.7271573488783801 0.7607961580641753 1.0356893716521847 0.9482570871645276 1.0118444151554702 1.0487050796577342 0.9190448771313873 0.8615761227385297 0.9163871557116868 1.0 14.453557047386969 -4.70651799839571 7.572397895367327 0.9646600567603081 0.7406246779716724 0.7183375887970825 0.056029822604871216 0.13174966687145379 15.215352373221082 0.015771954795085308 0.041831311022112565 1.9655405213156907e-05 4.70651799839571 -0.22403537878863566 S(ph)FDEQNVPK ddPTM_KYSE-520_SHP099_60min_R1 3 SFDEQNVPK 9 0 O95425-2;O95425-3;A0A6I8PIX7;O95425-4;O95425 O95425-2 SVIL Supervillin 1 S(1)FDEQNVPK;S(1)FDEQNVPK;S(1)FDEQNVPK 151.55 0.00025545 1472410000.0 1754290.0 1511430.0 1585840.0 1688580.0 1681480.0 1309680.0 1770970.0 1576200.0 1692600.0 1804120.0 True False 1656976.0366095866 1438818.634097319 1688065.7838337137 1849062.1355099108 1813802.90968752 1301505.8013188697 1949996.9306016064 1570732.5300878447 1385266.506973747 1788136.9003841202 0.9266494283819331 0.8046467995757137 0.9440360989536598 1.0340719075327527 1.0143534923404838 0.7278557928306751 1.0905188132870118 0.8784184979071941 0.7746982385275812 1.0 20.770025763308787 -7.495471174447675 24.869703467658997 0.8670854238324992 0.9328677945489785 0.03438440895068118 0.11250406890720588 1991.167507102174 1806800.1211302816 0.06092500919952994 0.029138288635890307 3.195426448726815e-08 7.495471174447675 0.0657823707164793 S(ph)FDEVEGVFGR ddPTM_KYSE-520_SHP099_60min_R1 1 SFDEVEGVFGR 11 0 I1E4Y6;Q6Y7W6;Q6Y7W6-3;C9JW88;Q6Y7W6-4;Q6Y7W6-5;E7ESB6 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(1)FDEVEGVFGR 89.189 0.0051026000000000005 0.0 70696.0 109280.0 84572.0 71578.0 102150.0 86357.0 93288.0 98663.0 120160.0 90006.0 True False 66774.35195101796 104030.02476737578 90023.64643998448 78380.75159928967 110188.62384600486 85818.01393049739 102718.46144314263 98320.76108111738 98341.97298710006 89208.61686360829 0.7485190814370518 1.1661432317287024 1.0091362203005827 0.8786231011643928 1.2351791533151226 0.9619924279479097 1.1514410272741886 1.1021442158602315 1.1023819945270066 1.0 16.44489544962757 -4.250195102503779 24.70045489904097 1.0674887571811695 0.7485188593523711 0.4727974318232546 0.10103403920015873 1252.6011325091824 2751546.074796794 0.024268871268016943 0.36191354179341934 5.620887556441684e-05 4.250195102503779 -0.3189698978287985 S(ph)FDHLISDTK ddPTM_KYSE-520_SHP099_60min_R1 8 SFDHLISDTK 10 0 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 S(1)FDHLISDTK;S(1)FDHLISDTK;S(1)FDHLISDTK;S(1)FDHLISDTK;S(1)FDHLISDTK;S(0.99)FDHLIS(0.01)DTK;S(1)FDHLISDTK;S(1)FDHLISDTK 244.18 6.4798e-14 4643057000.0 8372500.0 8065290.0 6618840.0 7513240.0 6974680.0 7619210.0 7019320.0 7041010.0 8185310.0 7449170.0 True False 7908060.734835028 7677821.362152892 7045501.016918431 8227296.070662034 7523547.635499299 7571655.684187554 7728901.367561535 7016586.379694083 6699064.038873504 7383176.149166555 1.071091976551003 1.0399076504519804 0.9542642454377521 1.1143301885856762 1.0190123442129426 1.0255282457323296 1.0468260828957747 0.9503479583764428 0.9073417596341276 1.0 22.815810148334087 -7.26716341033779 22.610786998740096 0.9466336005542219 1.0371509597883473 0.4493185266022731 0.043531317336326335 110.63070667230873 436996.1396302524 0.02224784817169658 0.011196845463490094 5.40550893641302e-08 7.26716341033779 0.0905173592341254 S(ph)FDILK ddPTM_KYSE-520_SHP099_60min_R1 7 SFDILK 6 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(1)FDILK;S(1)FDILK;S(1)FDILK;S(1)FDILK;S(1)FDILK;S(1)FDILK;S(1)FDILK 119.27 0.0082415 924602000.0 2397780.0 1760880.0 1707360.0 2113560.0 2008650.0 2069310.0 2162180.0 2330410.0 2133010.0 2199410.0 True False 2264770.3635440744 1676284.6816652345 1817419.1574725865 2314432.106935013 2166719.3273448595 2056394.6687184302 2380754.255243271 2322326.351631784 1745709.1528063791 2179924.9385150857 1.0389212598699766 0.7689644042547082 0.833707218703856 1.0617026605106645 0.9939421716147614 0.943332787467076 1.0921267118788895 1.0653239983637688 0.8008115884923614 1.0 21.05584702877756 -5.253886581218563 24.790708276971536 0.9986018932400931 0.8693743002501451 0.2100839702516113 0.09973978738497039 718.1797661388346 2357290.345012853 0.026726005081644195 0.045126672051083234 5.5733128055612096e-06 5.253886581218563 -0.12922759298994801 S(ph)FDILKK ddPTM_KYSE-520_SHP099_60min_R1 1 SFDILKK 7 1 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(1)FDILKK 89.04700000000001 0.0050253 335460000.0 591650.0 505550.0 444200.0 486220.0 443860.0 467060.0 433490.0 490570.0 578800.0 512520.0 True False 558829.9950749661 481262.61915397947 472833.8427451295 532430.2026126271 478789.25678206276 464144.90529289 477311.3996547029 488868.3271698989 473704.51036063215 507979.4715345262 1.1001035010072917 0.9474056455473696 0.9308128954833012 1.0481333054744102 0.9425366252217153 0.913707996684947 0.9396273400828977 0.9623781167634677 0.9325268773748774 1.0 18.954410670422924 -4.259363475332284 24.654419378209184 0.9558932066909074 1.1001035616185542 0.5670478906196397 0.03737019474997582 115.08261536074693 1366658.1824019444 0.009424081006013397 0.06053096800927521 5.503469001873901e-05 4.259363475332284 0.14421035492764678 S(ph)FDYNYR ddPTM_KYSE-520_SHP099_60min_R1 14 SFDYNYR 7 0 O75494;O75494-2;O75494-4;Q5JRI1;O75494-3;O75494-6 O75494;O75494-3 SRSF10 Serine/arginine-rich splicing factor 10 1 S(1)FDYNYR;S(0.999)FDY(0.001)NYR;S(1)FDYNYR;S(1)FDYNYR;S(1)FDYNYR;S(1)FDYNYR;S(1)FDYNYR;S(1)FDYNYR;S(1)FDYNYR;S(1)FDYNYR;S(1)FDYNYR;S(1)FDYNYR;S(0.999)FDY(0.001)NYR;S(1)FDYNYR 169.21 0.00066477 99945800000.0 22167680.0 19185750.0 17688130.0 17970630.0 18665400.0 19111200.0 18849190.0 19484490.0 21039850.0 18376350.0 True False 20937994.60022548 18264037.77160214 18828335.16180864 19678553.272133093 20134260.788401563 18991919.911860324 20754650.07556674 19416902.851904165 17219543.611456692 18213549.835583974 1.1495834029739076 1.0027719986753778 1.0337542835841673 1.080434810883869 1.1054550579187523 1.0427357699790978 1.1395170223773838 1.0660691093819168 0.9454249043651402 1.0 24.11850879636071 -7.7133586298520935 7.609744329189767 0.9729981120178556 1.0757961296812568 0.46570931745006783 0.04490495046375358 0.17575346501686132 23.54857106876882 0.0309030757513565 0.011325619941304245 1.9348235736912173e-08 7.7133586298520935 0.10279801766340124 S(ph)FDYNYRR ddPTM_KYSE-520_SHP099_60min_R1 5 SFDYNYRR 8 1 O75494;O75494-2;O75494-4;Q5JRI1;O75494-3;O75494-6 O75494;O75494-3 SRSF10 Serine/arginine-rich splicing factor 10 1 S(1)FDYNYRR;S(1)FDYNYRR;S(1)FDYNYRR;S(1)FDYNYRR;S(1)FDYNYRR 178.84 3.2034e-05 6081000000.0 8494540.0 10426290.0 10167950.0 6039410.0 6577620.0 6635340.0 4309250.0 4607560.0 11502230.0 5607620.0 True False 8023330.932754327 9925395.378219645 10823392.326295221 6613393.710585175 7095241.27246165 6593926.381805597 4744871.044227152 4591577.449772592 9413714.979622275 5557940.849462346 1.4435797627336162 1.7858044277638885 1.94737450783454 1.1898999808939905 1.2765953191365857 1.186397365571724 0.8537102449886909 0.8261292399714479 1.693741483508757 1.0 22.40611905002288 -5.341141869909759 6.253912318965909 1.1304120763030383 1.7299262942515432 0.5148598567063485 0.2574223666724644 0.18286715621441876 11.620593242362775 0.0737959255395763 0.11037961880745036 4.55887967823691e-06 5.341141869909759 0.5995142179485049 S(ph)FEDRVGTIK ddPTM_KYSE-520_SHP099_60min_R1 4 SFEDRVGTIK 10 1 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;A0A087WZ51;O43399-6 O43399 TPD52L2 Tumor protein D54 1 S(1)FEDRVGTIK;S(1)FEDRVGTIK;S(1)FEDRVGTIK;S(1)FEDRVGTIK 120.9 0.00033356 1411870000.0 1497000.0 1965450.0 1684730.0 886610.0 1238520.0 926780.0 685840.0 663060.0 1876790.0 908290.0 True False 1413958.4258044844 1871026.8317994042 1793330.3914633063 970873.147830984 1335984.477785159 920995.6222484136 755171.4003533678 660759.9996193674 1536012.2460257944 900243.2572389261 1.5706403957316366 2.0783569515842877 1.9920509007348812 1.0784564505472465 1.4840260863298933 1.0230519527279056 0.8388526037612343 0.7339793931319616 1.70621910652993 1.0 19.77995536320461 -5.264050085426154 24.91202131192569 1.1114027622267766 1.9001501962932545 0.5772092665262416 0.29655836972961314 148.85365821358548 1420404.1991520394 0.08346351879851276 0.13046765153987097 5.444398611744583e-06 5.264050085426154 0.788747434066478 S(ph)FEEKVENLK ddPTM_KYSE-520_SHP099_60min_R1 10 SFEEKVENLK 10 1 H0YC42;P55327-2;P55327;P55327-3;E5RK35;P55327-4;P55327-7;P55327-5;P55327-6 H0YC42 TPD52 Tumor protein D52 1 S(1)FEEKVENLK;S(1)FEEKVENLK;S(1)FEEKVENLK;S(1)FEEKVENLK;S(1)FEEKVENLK;S(1)FEEKVENLK;S(1)FEEKVENLK;S(1)FEEKVENLK;S(1)FEEKVENLK;S(1)FEEKVENLK 146.36 0.00015242 10548610000.0 9399630.0 8456380.0 7950850.0 6907660.0 8158860.0 6178210.0 6682980.0 6610080.0 8400720.0 6824960.0 True False 8878213.786202155 8050122.811514842 8463374.5128098 7564161.929536293 8800915.864436759 6139649.499699361 7358560.837999462 6587151.17528427 6875361.012917708 6764496.164138528 1.3124722922114058 1.1900550486216503 1.2511463244931307 1.1182151258562514 1.301045288649014 0.9076284989631977 1.087820978746403 0.9737829714806494 1.0163892248719013 1.0 22.689551052148598 -6.258496403251501 24.999996940065564 1.0011543090879118 1.2265677103367343 0.762246402739102 0.06621548768956127 126.8784875673398 1077811.1213874826 0.021059789950313615 0.020208105741767977 5.514467693454275e-07 6.258496403251501 0.22541340124882248 S(ph)FEERVETTVTSLK ddPTM_KYSE-520_SHP099_60min_R1 2 SFEERVETTVTSLK 14 1 E9PNK6;E9PPQ1;J3KNE7;Q16890-5;Q16890 E9PNK6 TPD52L1 Tumor protein D53 1 S(1)FEERVETTVTSLK;S(1)FEERVETTVTSLK 169.25 4.1276e-06 194470000.0 159947.0 194905.0 199752.0 115376.0 115604.0 107136.0 89915.0 85105.0 219124.0 132609.0 True False 151074.42106356026 185541.47124163044 212628.3335345001 126341.30035094084 124701.37710321619 106467.3244839186 99004.48568583498 84809.7906186564 179336.6052665223 131434.18742824078 1.1494301750527616 1.4116682643389922 1.617755149516095 0.9612514279811674 0.948774284250051 0.8100428554180139 0.7532628125379368 0.6452643127189421 1.3644593448294025 1.0 17.00398105921452 -5.375908214609452 5.940290030318974 0.8949199065075184 1.3925708989342203 0.5102619794091167 0.20869983906829867 0.1762794188390658 8.003759695940797 0.05913894205129403 0.0883061520373432 4.208155556917888e-06 5.375908214609452 0.49765099242670185 S(ph)FEFEDIQHFR ddPTM_KYSE-520_SHP099_60min_R1 4 SFEFEDIQHFR 11 0 Q68D51-2;Q68D51-3;Q68D51 Q68D51-2 DENND2C DENN domain-containing protein 2C 1 S(1)FEFEDIQHFR;S(1)FEFEDIQHFR;S(1)FEFEDIQHFR;S(1)FEFEDIQHFR 277.82 2.8048000000000003e-21 415371000.0 301437.0 345304.0 279966.0 304861.0 329880.0 257388.0 281481.0 346755.0 348945.0 327874.0 True False 284715.68871023785 328715.0775281295 298013.0563214382 333834.8977801981 355839.67923955026 255781.54601876886 309935.8464698275 345552.1878382255 285585.3841876138 324969.2914421118 0.8761310567123403 1.0115265847717336 0.9170499003119641 1.0272813664907952 1.0949947844623884 0.7870945124805196 0.9537388751239524 1.06333797358136 0.8788072956686936 1.0 18.30994386895525 -7.095381549376751 0.003755406588762837 1.816023389187623 0.11684760877693592 0.009930196830922222 0.09069489678394167 87644.84679286383 278.392103865423 62792.841349234375 63155.026380167685 8.028204943955815e-08 7.095381549376751 -1.699175780410687 S(ph)FEMTEFNQALEEIK ddPTM_KYSE-520_SHP099_60min_R1 7 SFEMTEFNQALEEIK 15 0 Q9BVS4-2;Q9BVS4;H0Y919 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 S(1)FEMTEFNQALEEIK;S(1)FEMTEFNQALEEIK;S(1)FEMTEFNQALEEIK;S(1)FEMTEFNQALEEIK;S(1)FEMTEFNQALEEIK;S(0.906)FEMT(0.094)EFNQALEEIK;S(1)FEMTEFNQALEEIK 291.67 3.789e-33 523895800.0 372136.0 325727.0 255394.0 309409.0 301867.0 295855.0 277276.0 328011.0 337447.0 292801.0 True False 351492.8742452756 310078.58599380526 271857.105884848 338815.1383327917 325622.21551171737 294008.4592031603 305305.7640329822 326873.2063993425 276175.1311466207 290207.0109357308 1.2111798164763055 1.068473793910083 0.936769601148793 1.1674946695475446 1.1220342832579933 1.0130990917661578 1.0520275270007007 1.1263449678399802 0.9516487222556536 1.0 18.146722847459777 -1.000000000000017 0.11633111733962986 0.975055508037877 1.4286337199937613 0.191793847316435 0.07800129783037232 213.8819870994314 1.723849531689359 0.6181100762802693 15.66272491272754 0.09999999999999606 1.000000000000017 0.4535782119558843 S(ph)FEVEEVETPNSTPPR ddPTM_KYSE-520_SHP099_60min_R1 5 SFEVEEVETPNSTPPR 16 0 Q9UHD8;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR;S(1)FEVEEVETPNSTPPR 273.39 1.1148e-29 4172280000.0 1763250.0 1725380.0 1746680.0 1340486.0 1551868.0 1682017.0 1478178.0 1613510.0 1920340.0 1626020.0 True False 1665439.0075482694 1642490.154951821 1859273.7875868138 1467885.3864081868 1673991.18267892 1671518.907990474 1627606.6578670542 1607913.1104060637 1571654.663831954 1611614.7278244165 1.033397733834632 1.0191580696020845 1.1536713803160152 0.9108165624607714 1.0387043216828304 1.0371702858827336 1.0099229237401086 0.9977031623287845 0.9752049523359678 1.0 20.6200754641267 -5.715655560498062 0.5555772836918812 0.9936160731389105 1.0554978453910169 0.11167690187277823 0.0546008231565516 2.7452056593749643 1.6917016176032666 0.04138327063810187 0.09029094124376132 1.924617540369972e-06 5.715655560498062 0.06188177225210634 S(ph)FGAS(ph)FVSFLNAMMTFEEEKMQLACDDLK ddPTM_KYSE-520_SHP099_60min_R1 1 SFGASFVSFLNAMMTFEEEKMQLACDDLK 29 1 Q8N584-2 Q8N584-2 2 S(0.642)FGAS(0.707)FVS(0.627)FLNAMMT(0.024)FEEEKMQLACDDLK 46.54 0.037701 1318000000.0 264660.0 188240.0 173350.0 107920.0 211560.0 164310.0 154170.0 260270.0 235560.0 236230.0 True False 249978.78221337032 179196.6678459996 184524.41836980652 118176.68435266873 228208.56838826026 163284.48034230014 169755.00815420327 259367.18411747488 192788.24198436513 234137.18598415874 1.067659462817168 0.7653490285738878 0.7881038528509994 0.5047326585733559 0.9746788722561157 0.6973880703996658 0.7250236968581683 1.1077573305037636 0.8233986462851262 1.0 17.83699455785933 -7.2465439220292955 24.877769795678322 0.974183502455542 0.780733050539152 0.22947147320718075 0.15738596936660204 1042.6893180745765 1741459.970651945 0.07275470320175291 0.041779480244368096 5.668342422910213e-08 7.2465439220292955 -0.19345045191639 S(ph)FGHFPGPEFLDVEK ddPTM_KYSE-520_SHP099_60min_R1 5 SFGHFPGPEFLDVEK 15 0 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(1)FGHFPGPEFLDVEK;S(1)FGHFPGPEFLDVEK;S(1)FGHFPGPEFLDVEK;S(1)FGHFPGPEFLDVEK;S(1)FGHFPGPEFLDVEK 245.74 4.2089e-19 1295919000.0 1142578.0 941309.0 849972.0 959367.0 968180.0 1088746.0 1092150.0 1200762.0 1263419.0 1211897.0 True False 1079196.9206672264 896087.1027063853 904762.5551232853 1050544.9512357935 1044370.2578093491 1081950.7323641763 1202555.1803568327 1196596.8368819572 1034013.9578011741 1201160.5354215978 0.8984618532180104 0.7460177688837121 0.7532403275351707 0.8746082811212746 0.8694676748123293 0.9007544790708765 1.0011610812161302 0.9962005923396087 0.860845763167072 1.0 20.195997549825666 -6.029703222336075 1.2774563510430608 0.9619447721949168 0.7994516665991556 0.5590610574389356 0.05821753597615587 0.321449527358345 1.088249376369126 0.025934254405596487 0.028671374073659665 9.338922635124838e-07 6.029703222336075 -0.16249310559576124 S(ph)FGNPFEGSR ddPTM_KYSE-520_SHP099_60min_R1 5 SFGNPFEGSR 10 0 Q96RR4-6;Q96RR4-5;Q96RR4-2;Q96RR4-3;Q96RR4-4;Q96RR4-7;Q96RR4;F5GZ00 Q96RR4-6 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 1 S(1)FGNPFEGSR;S(1)FGNPFEGSR;S(1)FGNPFEGSR;S(1)FGNPFEGSR;S(1)FGNPFEGSR 156.0 0.00010525 3213650000.0 1830780.0 1500863.0 1505354.0 1148301.0 1329179.0 1370941.0 1236487.0 1337350.0 1645017.0 1473153.0 True False 1729222.983830552 1428759.28863871 1602391.5274915595 1257435.1817907142 1433777.8253060074 1362384.4486942582 1361483.1729102056 1332711.044989836 1346323.3803039321 1460102.0105156903 1.184316555539713 0.9785338821183388 1.0974517642953003 0.8611968018224996 0.9819709958481698 0.9330748392114607 0.9324575701593248 0.9127520100593098 0.9220748760070723 1.0 20.477637736322578 -1.0000000000002325 0.6480813930831648 0.9333164970139347 22.05912094058113 0.6080767719829339 0.05682781506037699 136.79875242754 0.8892905875484376 0.02223535823567139 4144.151723251536 0.09999999999994647 1.0000000000002325 21.125804443567198 S(ph)FHIENK ddPTM_KYSE-520_SHP099_60min_R1 4 SFHIENK 7 0 A0A1B0GTU3;Q96L93-5;Q96L93-4;Q96L93;Q96L93-6;Q96L93-2;H0Y534 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 S(1)FHIENK;S(1)FHIENK;S(1)FHIENK;S(1)FHIENK 141.48 0.0010772 2483870000.0 3558540.0 3198500.0 3136770.0 3216540.0 3293170.0 3216680.0 3213330.0 3540130.0 4110060.0 3833880.0 True False 3361140.692426377 3044839.258953618 3338971.2132094507 3522238.9945119834 3552323.7434258196 3196603.5069531375 3538164.75547867 3527850.11530255 3363776.710181093 3799914.805913501 0.8845305392625394 0.801291453749221 0.8786963349844789 0.9269257797650112 0.9348429964528743 0.8412303091581215 0.9311168634550726 0.9284024236049823 0.8852242436978636 1.0 21.857535643021475 S(ph)FILDK ddPTM_KYSE-520_SHP099_60min_R1 10 SFILDK 6 0 Q9BVP2-2;Q9BVP2 Q9BVP2-2 GNL3 Guanine nucleotide-binding protein-like 3 1 S(1)FILDK;S(1)FILDK;S(1)FILDK;S(1)FILDK;S(1)FILDK;S(1)FILDK;S(1)FILDK;S(1)FILDK;S(1)FILDK;S(1)FILDK 133.33 0.0070429 4103762000.0 6335922.0 5759460.0 5833356.0 5268613.0 5323312.0 4995565.0 5274707.0 5536512.0 6273080.0 5722913.0 True False 5984455.776312629 5482766.896474295 6209383.461459601 5769340.39545374 5742226.368897925 4964385.825824253 5807925.859739459 5517307.132103616 5134046.803478007 5672212.44317894 1.0550478911468089 0.9666011192982625 1.0947022037100587 1.0171234687078057 1.0123433186645152 0.8752115467385436 1.023926010867897 0.9726904955293761 0.9051224464718175 1.0 22.43548013663029 -6.020341700410373 23.794615704658284 0.9563901511851447 1.0306996581322665 0.3584169121377193 0.04992900333525953 473.8099565737682 554236.386634774 0.015857440257890036 0.01606190852951946 9.54241498840012e-07 6.020341700410373 0.0743095069471218 S(ph)FKLS(ph)GFSFK ddPTM_KYSE-520_SHP099_60min_R1 2 SFKLSGFSFK 10 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 2 S(1)FKLS(0.998)GFS(0.002)FK;S(1)FKLS(1)GFSFK 125.52 0.00028562 1089000000.0 3107900.0 3241900.0 3096100.0 3428500.0 2807200.0 2275900.0 2852600.0 3077900.0 3315600.0 3519000.0 True False 2935498.5915549514 3086154.2578088916 3295679.5599351497 3754343.6091838884 3028110.6692168857 2261695.2638977612 3140968.646693131 3067223.4832872604 2713570.619474275 3487824.397740573 0.8416417390326701 0.8848364785245825 0.9449098303429795 1.076414171429034 0.8681947036033432 0.648454453544994 0.900552404165721 0.8794088043177346 0.7780123968489173 1.0 21.733895975584016 -5.989948293505627 24.94036880565134 0.8286607972986898 0.9386101212684481 0.16028000890504823 0.10171754367681428 339.411356517598 842144.0531035069 0.03184970331011813 0.03607490242322059 1.0234148313678845e-06 5.989948293505627 0.10994932396975832 S(ph)FLESNYFTKPNLK ddPTM_KYSE-520_SHP099_60min_R1 4 SFLESNYFTKPNLK 14 1 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 S(1)FLESNYFTKPNLK;S(1)FLESNYFTKPNLK;S(1)FLESNYFTKPNLK;S(1)FLESNYFTKPNLK 223.29 2.7781e-14 6700960000.0 4308690.0 4082220.0 4254870.0 4766130.0 4472070.0 5008420.0 5746540.0 6951120.0 7135560.0 5635670.0 True False 4069678.3765394324 3886104.0236628596 4529145.728232703 5219101.562210769 4823996.46640237 4977160.593000932 6327456.344025784 6927008.187123602 5839922.176829492 5585742.348284919 0.7285832612363533 0.695718452688043 0.8108404301217653 0.9343613143583815 0.8636267420898065 0.8910472919555894 1.1327870047512316 1.2401231125976504 1.0455051115314364 1.0 22.413317597753274 -6.031974024699454 0.7462371197262271 1.1263549441146052 0.721130439273785 0.7252005070515695 0.0862894158776298 0.36684552790218683 0.4546539138721099 0.05969043091773522 0.07560073651422704 9.290219502368321e-07 6.031974024699454 -0.4052245048408203 S(ph)FLNYYADLETSAR ddPTM_KYSE-520_SHP099_60min_R1 7 SFLNYYADLETSAR 14 0 Q92870;Q92870-4;H0YAJ5;G5E9Y1;Q92870-2 Q92870 APBB2 Amyloid beta A4 precursor protein-binding family B member 2 1 S(1)FLNYYADLETSAR;S(1)FLNYYADLETSAR;S(1)FLNYYADLETSAR;S(1)FLNYYADLETSAR;S(1)FLNYYADLETSAR;S(1)FLNYYADLETSAR;S(1)FLNYYADLETSAR 197.1 5.723699999999999e-11 1454890000.0 624624.0 569719.0 531752.0 593878.0 521536.0 560203.0 510785.0 662076.0 685856.0 595690.0 True False 589974.8615629261 542348.8440743469 566029.5847532825 650319.986564068 562577.9160660785 556706.5652802485 562420.1325812072 659779.4128856997 561321.8394227738 590412.6500398068 0.9992585042396174 0.9185928588043983 0.9587016550460421 1.1014668918767612 0.9528554580057664 0.9429109712380218 0.9525882152817824 1.1174886121447702 0.9507280024994863 1.0 19.17136410700413 S(ph)FNDFR ddPTM_KYSE-520_SHP099_60min_R1 1 SFNDFR 6 0 P42356 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 S(1)FNDFR 93.178 0.014424000000000001 1034000000.0 1177500.0 1213400.0 1036900.0 1158500.0 1245200.0 1229200.0 1113700.0 1157300.0 1308100.0 1079800.0 True False 1112181.7277119448 1155106.442649468 1103740.2330986594 1268603.4916842736 1343190.1557811564 1221528.1068514113 1226283.6646645677 1153285.59641585 1070582.0145175224 1070233.8120716892 1.0391950947233255 1.0793028865472751 1.0313075709709738 1.18535172162856 1.255043655536444 1.1413656465280764 1.145809122112118 1.0776015328682194 1.0003253517520243 1.0 20.029494583396247 -7.611809810810126 2.939465192570075 0.9977070930280122 1.127597482066876 0.3824015635392891 0.06297508649382529 0.3131020221737209 5.122868464610259 0.05958543891619275 0.018938893436170664 2.444500830735549e-08 7.611809810810126 0.12989038903886374 S(ph)FNGTDNHIR ddPTM_KYSE-520_SHP099_60min_R1 7 SFNGTDNHIR 10 0 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 S(0.999)FNGT(0.001)DNHIR;S(1)FNGTDNHIR;S(1)FNGTDNHIR;S(1)FNGTDNHIR;S(1)FNGTDNHIR;S(0.995)FNGT(0.005)DNHIR;S(1)FNGTDNHIR 176.97 2.4179e-05 12172620000.0 8726920.0 7923320.0 7097610.0 7419950.0 7450060.0 6794420.0 6620660.0 7441440.0 8900790.0 7169930.0 True False 8242820.350916285 7542671.814054216 7555133.297177525 8125139.817110681 8036337.336957095 6752013.504517865 7289940.924214884 7415627.381485147 7284630.90665655 7106409.998321129 1.159913423636355 1.0613899023327042 1.063143457661802 1.1433536510038436 1.130857541129158 0.950130024317906 1.0258261099397745 1.0435124603332864 1.0250788947411598 1.0 22.76068949546604 -6.2460220771980595 24.980383272780724 1.0126863127128913 1.1079922777797462 0.652468750826376 0.03742054046001862 570.687930955583 924676.0436963757 0.012886800438545083 0.01284477690557595 5.675157552234425e-07 6.2460220771980595 0.09530596506685485 S(ph)FPDFPTPGVVFR ddPTM_KYSE-520_SHP099_60min_R1 2 SFPDFPTPGVVFR 13 0 H3BSW3;H3BQF1;H3BQZ9;H3BQB1;P07741-2;P07741 H3BSW3 APRT Adenine phosphoribosyltransferase 1 S(1)FPDFPTPGVVFR;S(1)FPDFPTPGVVFR 147.66 7.706e-06 146364000.0 170771.0 155501.0 140435.0 129429.0 158661.0 157723.0 141999.0 140994.0 144819.0 148259.0 True False 161297.99220645145 148030.49854824028 149487.66480394453 141729.89324575214 171146.71804239822 156738.59225262387 156353.64469669003 140504.92472224685 118523.52018990394 146945.5406037566 1.0976719099043413 1.0073834016331893 1.0172997709882388 0.9645062562866836 1.1646948749802546 1.0666440887462827 1.0640244273781854 0.9561700487469906 0.8065812661134537 1.0 17.16492205223201 -7.424762022294871 4.087804728946678 0.8969447566531198 1.0521127730082507 0.46214681741416597 0.06723519743271665 0.19489896252000816 5.6619935323607065 0.041135067203015706 0.017790927990259126 3.7604340606000226e-08 7.424762022294871 0.1551680163551309 S(ph)FPDIEDEEK ddPTM_KYSE-520_SHP099_60min_R1 1 SFPDIEDEEK 10 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(1)FPDIEDEEK 143.97 0.00021 117690000.0 1473900.0 1337200.0 1259700.0 1390900.0 1445500.0 1600100.0 1542000.0 1779700.0 1784900.0 1674600.0 True False 1392139.828853193 1272958.9048218797 1340902.277591262 1523090.717810668 1559252.6262300513 1590113.1823730436 1697880.4084697515 1773526.6360851026 1460807.1536674018 1659764.3468190837 0.8387575209222987 0.7669515900022124 0.807887143835258 0.9176547988451802 0.9394421739558018 0.9580355099327651 1.0229647429912063 1.0685412296535004 0.880129252364662 1.0 20.66254699173421 -5.5330683705859345 1.3623014528761148 0.9918270145913046 0.7928657427377293 0.7116161585087704 0.049533388779002166 0.22419461479718983 0.8471392243863247 0.017860371167030247 0.0317318460875001 2.9304318737056587e-06 5.5330683705859345 -0.19896127185357537 S(ph)FPLFDNSK ddPTM_KYSE-520_SHP099_60min_R1 13 SFPLFDNSK 9 0 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 S(1)FPLFDNSK;S(1)FPLFDNSK;S(1)FPLFDNSK;S(1)FPLFDNSK;S(1)FPLFDNSK;S(1)FPLFDNSK;S(1)FPLFDNSK;S(1)FPLFDNSK;S(1)FPLFDNSK;S(1)FPLFDNSK;S(1)FPLFDNSK;S(1)FPLFDNSK;S(1)FPLFDNSK 164.81 0.00011685 16112708000.0 21311400.0 21841780.0 19902970.0 20612270.0 22024530.0 17111587.0 18033490.0 20425570.0 22065160.0 19824030.0 True False 20129214.158777367 20792468.103619818 21185947.29207795 22571253.943495043 23757735.2085663 17004787.238312084 19856491.159101915 20354718.46503389 18058683.16141847 19648404.517061964 1.0244706709543712 1.0582267932016765 1.078252805396023 1.1487575962666579 1.209143225239278 0.8654538450460821 1.0105905108915716 1.035947648948218 0.9190915804760109 1.0 24.227908832228508 -6.261714646500143 24.999928253258535 0.9712368103978126 1.10232168997766 0.5252901205618372 0.06528728092889494 23.123664932582287 2100030.181529038 0.023438731294913157 0.021978097743534656 5.473754982270493e-07 6.261714646500143 0.13108487957984738 S(ph)FPLHS(ph)PVAGVAHR ddPTM_KYSE-520_SHP099_60min_R1 3 SFPLHSPVAGVAHR 14 0 I3L2Z9;I3L100;I3L2W2;Q96JN8-2;Q96JN8 I3L2Z9 NEURL4 Neuralized-like protein 4 2 S(1)FPLHS(1)PVAGVAHR;S(1)FPLHS(1)PVAGVAHR;S(1)FPLHS(1)PVAGVAHR 159.26 3.7788e-06 622500000.0 400160.0 351027.0 333455.0 374390.0 375653.0 372313.0 345993.0 370188.0 469280.0 349069.0 True False 377962.32710081676 334163.13601773133 354950.0428468645 409971.91303554206 405214.75392680545 369989.25646450534 380969.34900627355 368903.90423052874 384070.58158610435 345976.5202315727 1.0924508022909618 0.9658549539548688 1.0259367965470187 1.1849703348687803 1.1712203870239022 1.06940568168285 1.1011422068505663 1.066268612631892 1.1101059150749135 1.0 18.40031460682227 -5.050074327850619 23.768307158481065 1.1049340385852782 1.020838620333749 0.24662003260901777 0.05723701157628741 245.0456838551664 116313.0648084686 0.015460894701077357 0.026779827619863854 8.910984169737789e-06 5.050074327850619 -0.08409541825152922 S(ph)FPLWYEEALKDEEER ddPTM_KYSE-520_SHP099_60min_R1 1 SFPLWYEEALKDEEER 16 1 P43363 P43363 MAGEA10 Melanoma-associated antigen 10 1 S(1)FPLWYEEALKDEEER 101.49 0.00063832 0.0 50326.0 52881.0 36930.0 40971.0 58747.0 59252.0 64274.0 70581.0 77444.0 65078.0 True False 47534.3164576062 50340.51738400078 39310.56689008918 44864.87152161967 63370.05467529357 58882.18628958658 70771.44317379048 70336.17098472924 63382.12180436899 64501.45954991788 0.7369494704351495 0.7804554770585012 0.6094523622316889 0.6955636637477731 0.9824592360774609 0.9128814557136876 1.0972068487693714 1.0904585954414854 0.9826463191165057 1.0 15.977044186001688 -5.797759464686783 4.652144048714978 1.0186734090083303 0.7024808791849952 0.846693512174653 0.0637142400729909 0.07797009726790695 3.834904485655485 0.02155012671422157 0.02550679049797072 1.5930908209261812e-06 5.797759464686783 -0.316192529823335 S(ph)FQDYTGQK ddPTM_KYSE-520_SHP099_60min_R1 2 SFQDYTGQK 9 0 A0A087WXU5;A0A087WYV3;A0A0D9SEW3;A0A087WXF8;Q9NP64-2;Q9NP64-3;Q9NP64 A0A087WXU5 ZCCHC17 Nucleolar protein of 40 kDa 1 S(1)FQDYTGQK;S(0.998)FQDY(0.001)TGQK 125.03 0.00067286 1071940000.0 1767910.0 1534550.0 1442810.0 1316150.0 1391010.0 1602320.0 1437280.0 1699140.0 1906780.0 1422140.0 True False 1669840.508058789 1460827.9145934903 1535815.8411776219 1441236.5002850739 1500474.573235744 1592319.326529576 1582574.288901038 1693246.0799222568 1560556.8180121721 1409540.946008176 1.1846697414415537 1.0363855826470023 1.0895858297178642 1.0224864374225238 1.064512937694426 1.1296722745366345 1.1227586494616513 1.2012748439252754 1.10713833637233 1.0 20.426793956948668 -6.265520276923817 24.134049064426634 1.1254103661445523 1.0745210788655428 0.04140748455590482 0.06201935148318735 448.00507725932823 2649449.4019896192 0.020640861168041775 0.018894549949944005 5.425999171042232e-07 6.265520276923817 -0.05088928727900943 S(ph)FS(ph)IS(ph)PSRR ddPTM_KYSE-520_SHP099_60min_R1 1 SFSISPSRR 9 1 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2;H7C2G8 P18583-10 SON Protein SON 3 S(1)FS(1)IS(0.869)PS(0.131)RR 66.285 0.015584 0.0 158260.0 133120.0 128670.0 161070.0 150910.0 147290.0 142160.0 155820.0 190900.0 156960.0 True False 149481.0023165116 126724.71538280646 136964.274079279 176378.0443725385 162785.75843955518 146370.70847554854 156530.9201478988 155279.49678866158 156237.37219738192 155569.45651303232 0.9608634346806331 0.8145860905041505 0.8804059431023679 1.1337575403675915 1.0463863671460365 0.9408704751969537 1.0061802853620303 0.9981361397611719 1.0042933600162938 1.0 17.247199313278866 -5.159123482713331 11.56963564831084 1.0158318859359938 0.877818721700129 0.5355220208995981 0.05669790466762398 0.4902708693723268 53.24111160808611 0.015693009177721345 0.027199430830988823 6.932286726618284e-06 5.159123482713331 -0.13801316423586485 S(ph)FSEDTLMDGPAR ddPTM_KYSE-520_SHP099_60min_R1 1 SFSEDTLMDGPAR 13 0 Q9BRG2;M0QZQ6 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 S(0.705)FS(0.291)EDT(0.004)LMDGPAR 101.53 0.0020573 333280000.0 1265200.0 1245000.0 1172000.0 1095400.0 1122600.0 1210700.0 1069200.0 1158000.0 1475200.0 1272900.0 True False 1195016.8338863284 1185188.3312169025 1247548.9952663009 1199506.4866559817 1210942.233279734 1203143.5722136383 1177285.170386418 1153983.168279231 1207340.8667657303 1261623.0963012145 0.947205894842794 0.9394155312244988 0.9888444488087007 0.9507645271972713 0.9598288401900178 0.9536473894152504 0.9331512508275603 0.9146813907120449 0.9569742899486962 1.0 20.26684954595888 -6.540593683730905 22.304759814573934 0.9439928961115225 0.9575339261900986 0.0 0.02397582653536327 210.74992880650646 265345.72611574404 0.008875947961526763 0.006877848776568899 2.880091704463521e-07 6.540593683730905 0.0135410300785761 S(ph)FSEDVFQSVK ddPTM_KYSE-520_SHP099_60min_R1 5 SFSEDVFQSVK 11 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 S(0.975)FS(0.025)EDVFQSVK;S(0.936)FS(0.064)EDVFQSVK;S(1)FSEDVFQSVK;S(0.998)FS(0.002)EDVFQSVK;S(0.986)FS(0.014)EDVFQSVK 278.27 3.6932e-21 2975000000.0 2772190.0 2643920.0 2556980.0 2401350.0 2667060.0 2685470.0 2577030.0 2821780.0 3321560.0 2838220.0 True False 2618411.0944762398 2516902.1145951715 2721807.022112654 2629573.582007798 2876942.448504412 2668708.9856054853 2837541.3417891064 2811991.903788402 2718448.4337136466 2813075.5789017444 0.9308001228671204 0.8947154258748348 0.9675555973420655 0.9347681952556753 1.0227035740104793 0.9486801583366553 1.0086971580397117 0.9996147721300238 0.9663616769141192 1.0 21.42371688338524 -5.225632113744464 1.2523073815195533 0.989495893818567 0.9130414403988467 0.522591459330288 0.026674029470199277 0.37414538789450047 1.111394449258568 0.00867575248777112 0.023426302580426727 5.9479579048884014e-06 5.225632113744464 -0.07645445341972024 S(ph)FSEDVISHK ddPTM_KYSE-520_SHP099_60min_R1 5 SFSEDVISHK 10 0 Q03001;F8W9J4;Q03001-14;F6QMI7;E9PHM6;Q03001-8;A0A494C1D7;H0YC82;Q03001-10 Q03001 DST Dystonin 1 S(0.987)FS(0.013)EDVISHK;S(0.983)FS(0.017)EDVISHK;S(0.995)FS(0.005)EDVISHK;S(0.992)FS(0.008)EDVISHK;S(0.996)FS(0.004)EDVISHK 243.85 6.6502e-14 1793120000.0 2365550.0 2245440.0 2007230.0 2415350.0 2504540.0 2055190.0 2222510.0 2191090.0 2541490.0 2032470.0 True False 2234328.2258929852 2137565.6919258484 2136619.2574815517 2644904.1377985426 2701633.0491167163 2042362.7968759793 2447183.000407331 2183489.620194252 2080019.4817492117 2014463.8970377308 1.1091428489627264 1.0611089605870518 1.0606391410754248 1.3129568326778525 1.34111763089399 1.0138492925483915 1.2148060851355609 1.0839060572915076 1.0325424470539681 1.0 20.941964519247836 -7.607944670323098 2.448174503902067 1.0080512767048473 1.1592301018141293 0.2415480590510125 0.1018430904370717 0.4722147598628526 5.255460585591671 0.09508509104235108 0.029628003463387207 2.4663535338393066e-08 7.607944670323098 0.15117882510928204 S(ph)FSGLIK ddPTM_KYSE-520_SHP099_60min_R1 5 SFSGLIK 7 0 Q14CB8-4;Q14CB8-6;Q14CB8-7;Q14CB8-3;Q14CB8;Q14CB8-2 Q14CB8-4 ARHGAP19 Rho GTPase-activating protein 19 1 S(0.999)FS(0.001)GLIK;S(0.985)FS(0.015)GLIK;S(0.986)FS(0.014)GLIK;S(0.996)FS(0.004)GLIK;S(0.998)FS(0.002)GLIK 98.58200000000001 0.005534399999999999 793962000.0 1560050.0 2004920.0 2001130.0 2281080.0 2338780.0 1840980.0 2070960.0 2390780.0 2497670.0 2523610.0 True False 1473510.9166174252 1908600.6337537244 2130126.0417212085 2497873.157368292 2522828.680162104 1829489.7609431418 2280312.847421867 2382486.9421922457 2044156.0891369032 2501252.778738871 0.5891091572761261 0.763057876427843 0.8516236582834366 0.9986488285393198 1.008626037962509 0.7314293767084062 0.9116682915077452 0.9525174594282682 0.8172529008313844 1.0 21.254219434202042 -4.460637569899518 1.8206723085747782 0.9107066321310825 0.5533289610546546 0.5987096967987908 0.08339101009712685 0.4044646565724853 1.8676554980338749 0.023617079089894927 0.21674768722563836 3.462281937775338e-05 4.460637569899518 -0.3573776710764279 S(ph)FSIS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 2 SFSISPVR 8 0 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2;H7C2G8 P18583-10 SON Protein SON 2 S(1)FS(0.004)IS(0.996)PVR;S(1)FS(0.007)IS(0.993)PVR 143.73 0.00057954 440080000.0 1185060.0 1175610.0 1018390.0 1067770.0 1111150.0 1086660.0 1005790.0 1114670.0 1369960.0 1000990.0 True False 1119322.359441458 1119131.9309734155 1084037.048881612 1169250.539763244 1198591.1834213247 1079877.7518639388 1107465.0687644545 1110803.4699359331 1121209.7978812219 992122.0073584347 1.1282103926125975 1.1280184520381216 1.0926448973427219 1.178535030057867 1.2081086545117798 1.08845257322651 1.1162589485471905 1.1196238584541558 1.1301128183483085 1.0 19.92015802306048 -10.034378062922409 0.45103816094648336 0.9495939922965876 1.1378616504393144 0.5781487030205416 0.034104092867912814 13.847298338911965 1.823911852748101 0.9379256520768218 0.020281774083642755 9.238935540592988e-11 10.034378062922409 0.18826765814272683 S(ph)FSISPVR ddPTM_KYSE-520_SHP099_60min_R1 1 SFSISPVR 8 0 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2;H7C2G8 P18583-10 SON Protein SON 1 S(0.999)FS(0.001)ISPVR 118.67 0.00097045 186970000.0 129860.0 106600.0 108390.0 100800.0 97386.0 103770.0 101550.0 110570.0 116390.0 93726.0 True False 122656.40693050787 101478.77599013783 115376.99283013183 110380.00169337491 105049.72414945689 103122.33293847284 111815.66503249222 110186.45847723202 95256.50995313407 92895.66055772456 1.3203674552084188 1.092395224716442 1.2420062695871306 1.188214831895035 1.1308356441922267 1.1100877298180523 1.2036694110486563 1.18613138456304 1.0254139900748376 1.0 16.503323585004825 -13.999999999988997 0.05609217881821252 0.31253371344167746 1.471940535934619 0.49626147885955485 0.06598596008674558 409.87021001117205 1.6842705222852048 39.2880717807685 7.329038850398366 1.0000000000253347e-14 13.999999999988997 1.1594068224929415 S(ph)FSKEELMS(ph)SDLEET(ph)AGSTSIPK ddPTM_KYSE-520_SHP099_60min_R1 1 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 3 S(0.53)FS(0.53)KEELMS(0.832)S(0.441)DLEET(0.618)AGS(0.036)T(0.01)S(0.003)IPK 55.588 0.019944 0.0 49449.0 69816.0 56214.0 58600.0 73237.0 52291.0 51751.0 80114.0 89518.0 67726.0 True False 46705.96539586238 66461.93456404755 59837.64438558009 64169.32638126753 79000.33523847134 51964.632472638405 56982.49612108825 79836.10323274824 73263.78776514008 67126.00033003061 0.6957954468645321 0.9901071751226331 0.8914227585642417 0.9559533722517899 1.1768962078786098 0.7741356883644182 0.8488885951930552 1.189346942171846 1.0914368114431445 1.0 16.03458406224409 -3.713099855098941 1.3518219465552448 0.9955709929526727 3.5103002120591507e-25 0.319075929843621 0.12805500901136296 6.761295569952852 3.8945337841428502 0.03868915746046917 13.272721469500004 0.00019359767835742074 3.713099855098941 -0.9955709929526727 S(ph)FSKEVEER ddPTM_KYSE-520_SHP099_60min_R1 7 SFSKEVEER 9 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(0.662)FS(0.338)KEVEER;S(0.86)FS(0.14)KEVEER;S(0.996)FS(0.004)KEVEER;S(0.565)FS(0.435)KEVEER;S(0.645)FS(0.355)KEVEER;S(0.634)FS(0.366)KEVEER;S(0.658)FS(0.342)KEVEER 148.78 0.00019016 17443690000.0 22604650.0 21660110.0 20606810.0 18291310.0 19831140.0 18599220.0 16868280.0 17882080.0 25850900.0 17167310.0 True False 21350725.003247373 20619525.803112034 21935157.944661763 20029710.602917142 21391737.894248273 18483135.368949663 18573490.360948212 17820051.238188848 21157028.20815768 17015220.98936508 1.2548015107527601 1.2118282692889932 1.289149165818755 1.1771642939833806 1.2572118756270414 1.086270662044417 1.091580907033596 1.0473006051068516 1.2434177740848227 1.0 24.020322552992607 -6.264166941774131 24.960790409884467 1.0965369544524222 1.2360337288657344 0.55845432190832 0.06412569401894452 183.5630586415858 1679833.5130143913 0.020920414390905175 0.019285263627706932 5.442933875305388e-07 6.264166941774131 0.1394967744133122 S(ph)FSLDEPPLFIPDNIATIR ddPTM_KYSE-520_SHP099_60min_R1 6 SFSLDEPPLFIPDNIATIR 19 0 Q92576-2;Q92576;E7EVH3;D6R9X2;E9PE34;A0A1B0GX99 Q92576-2 PHF3 PHD finger protein 3 1 S(0.972)FS(0.028)LDEPPLFIPDNIATIR;S(0.816)FS(0.184)LDEPPLFIPDNIATIR;S(0.964)FS(0.036)LDEPPLFIPDNIATIR;S(0.887)FS(0.113)LDEPPLFIPDNIATIR;S(0.969)FS(0.031)LDEPPLFIPDNIATIR;S(0.997)FS(0.003)LDEPPLFIPDNIATIR 250.27 1.6705999999999998e-26 488751900.0 407834.0 455287.0 411095.0 416343.0 426334.0 405446.0 337564.0 443422.0 536457.0 475851.0 True False 385210.6350230769 433414.3291202803 437594.84147525614 455912.11354191246 459884.0602913618 402915.4611214431 371688.2634271618 441883.8725774723 439049.93178046594 471635.33034647594 0.8167552561002817 0.91896069109556 0.9278245570657042 0.9666623431433502 0.975083991170718 0.8542944838874785 0.7880840121839677 0.936918513404949 0.9309097591521146 1.0 18.8473122695282 -8.058319419093884 2.0700328833353465 0.9986529064572326 0.8991694070986181 0.22540725963625152 0.05820949380351161 0.6543258299690785 6.315289119086327 0.06034212655481329 0.016777997371652427 8.743404703231395e-09 8.058319419093884 -0.09948349935861445 S(ph)FSLEGLTGGAGVGNKPSSSLEVSSANAEELR ddPTM_KYSE-520_SHP099_60min_R1 2 SFSLEGLTGGAGVGNKPSSSLEVSSANAEELR 32 1 Q12802-2;Q12802;Q12802-4;A8MYJ1;H0YMW2;A0A087WTD7;A0A087WY36;H0YLH1 Q12802-2 AKAP13 A-kinase anchor protein 13 1 S(0.5)FS(0.5)LEGLT(0.001)GGAGVGNKPSSSLEVSSANAEELR;S(0.5)FS(0.5)LEGLTGGAGVGNKPSSSLEVSSANAEELR 109.59 0.00021219999999999998 149907000.0 221269.0 245870.0 188375.0 184056.0 189884.0 205430.0 188192.0 231685.0 261359.0 245375.0 True False 208994.76748118398 234058.03614160622 200517.95391065665 201548.62690154588 204826.79050782943 204147.83516961077 207216.28393692564 230881.33881068535 213902.79392422995 243201.16839886102 0.8593493561610815 0.9624050644269124 0.8244942046569368 0.8287321488973973 0.8422113752837903 0.839419631548805 0.8520365477730003 0.9493430493394235 0.8795302889886598 1.0 17.89179063430052 -8.137357091324018 0.8598349030618821 0.9972407349168 0.8598764157020687 0.46348049047929796 0.04385740439392555 0.7242980102229839 1.1596394375543617 0.04420951887260294 0.015527561123950732 7.288579726148163e-09 8.137357091324018 -0.13736431921473125 S(ph)FSMHDLTTIQGDEPVGQRPYQPLPEAK ddPTM_KYSE-520_SHP099_60min_R1 3 SFSMHDLTTIQGDEPVGQRPYQPLPEAK 28 1 Q6NUK4 Q6NUK4 REEP3 Receptor expression-enhancing protein 3 1 S(0.471)FS(0.471)MHDLT(0.044)T(0.015)IQGDEPVGQRPYQPLPEAK;S(0.5)FS(0.5)MHDLTTIQGDEPVGQRPYQPLPEAK;S(0.499)FS(0.499)MHDLT(0.002)TIQGDEPVGQRPYQPLPEAK 137.47 1.556e-06 2322080000.0 816205.0 918112.0 836582.0 959258.0 659404.0 820385.0 838460.0 886152.0 1054674.0 784857.0 True False 770928.4815856712 874004.5214057926 890509.4142985264 1050425.5919085648 711295.3433044632 815264.6729086363 923219.7193810286 883078.145541431 863171.7877679485 777903.777589507 0.9910332148977985 1.1235380860523305 1.1447552254572548 1.3503284367168418 0.9143744558080903 1.0480276563701743 1.1868045200163604 1.1352022846293768 1.109612541595648 1.0 19.569232187257924 -5.781295460462695 24.999885078382356 1.0776050448279655 1.149804360580803 0.129033099448139 0.1076762371383579 649.2951398583407 817493.8881803304 0.03495900393121393 0.03969185813090338 1.6546438884082296e-06 5.781295460462695 0.07219931575283756 S(ph)FSPTMK ddPTM_KYSE-520_SHP099_60min_R1 1 SFSPTMK 7 0 A3KN83-3;A3KN83-2;A3KN83;A3KN83-4 A3KN83-3 SBNO1 Protein strawberry notch homolog 1 1 S(0.714)FS(0.274)PT(0.012)MK 75.38 0.027652 237050000.0 1210700.0 1152200.0 974370.0 900400.0 1044700.0 1095000.0 934070.0 1022400.0 1286000.0 967400.0 True False 1143540.057529386 1096846.5825125412 1037179.4492471227 985973.7452848692 1126911.9464701037 1088165.6988303747 1028494.9112447076 1018853.5330299549 1052494.81742186 958829.5886258114 1.1926416029445863 1.1439431944153235 1.0817140621761598 1.0283096777373764 1.175299510818379 1.1348895692611312 1.0726566257918053 1.062601264203965 1.0976870446085096 1.0 19.87091490439285 -13.999999995981836 0.017830663976468288 1.4900131268459582e-07 1.905024542570101 0.4423210813869519 0.04419001465157383 4373.656348252688 5.895712925669001 411.3069668097382 239.93351011031538 1.0000000092521636e-14 13.999999995981836 1.9050243935687883 S(ph)FSSSAEEHS ddPTM_KYSE-520_SHP099_60min_R1 1 SFSSSAEEHS 10 0 Q96EQ0 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta 1 S(0.427)FS(0.427)S(0.073)S(0.073)AEEHS 79.148 0.012004 285050000.0 289330.0 337580.0 310230.0 401230.0 326670.0 525880.0 490360.0 573950.0 695420.0 599690.0 True False 273280.2881349442 321362.1500820892 330227.92218555 439362.7785658012 352377.07050195185 522597.78785471915 539930.3742524167 571959.1014109373 569149.2581115946 594377.2131517597 0.45977584955829853 0.5406703739162981 0.5555864438922129 0.7391985574884761 0.592850907983885 0.8792359065778764 0.9083968266370243 0.9622830228939169 0.9575556490357517 1.0 19.181019282266373 -6.027635196287273 0.5871463391520556 1.0120853337608497 0.45890226409544205 0.9129774740251188 0.057669978378616545 0.24237939714695406 0.18174055509596992 0.04455584369681104 0.0651593650306432 9.383498819854328e-07 6.027635196287273 -0.5531830696654076 down S(ph)FTALR ddPTM_KYSE-520_SHP099_60min_R1 5 SFTALR 6 0 A0A494C100;O76050-2;O76050;Q9UJA3-2;Q9UJA3-3;Q9UJA3;Q9UJA3-4 A0A494C100 NEURL1;MCM8 E3 ubiquitin-protein ligase NEURL1;DNA helicase MCM8 1 S(1)FTALR;S(0.999)FT(0.001)ALR;S(1)FTALR;S(0.984)FT(0.016)ALR;S(0.99)FT(0.01)ALR 155.82 0.0067835 1934340000.0 1044980.0 997290.0 883620.0 919360.0 959930.0 898520.0 931100.0 998440.0 1191330.0 1014910.0 True False 987012.8762840151 949378.6914371925 940579.5590419885 1006735.6979843369 1035471.0297454271 892912.0033909301 1025224.6746603021 994976.6446776476 975014.5029853695 1005918.6869880329 0.9812054284818722 0.9437926779945455 0.9350453184822664 1.0008122038161458 1.0293784608434715 0.8876582321624102 1.0191923939002228 0.9891223391592928 0.9692776519589291 1.0 19.940082259536855 -1.0000000003514056 0.07989241549648358 1.021876886286447 0.8506992928641812 0.05719072401899994 0.03964158668277679 604.7901994714531 3.5308342890771045 1.143507265801452 11.434427512643447 0.09999999991908588 1.0000000003514056 -0.17117759342226568 S(ph)FTGGLGQLVVPSK ddPTM_KYSE-520_SHP099_60min_R1 2 SFTGGLGQLVVPSK 14 0 Q9Y3Q8 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 S(0.5)FT(0.5)GGLGQLVVPSK;S(0.997)FT(0.003)GGLGQLVVPSK 144.33 4.6277e-06 2089300000.0 2952100.0 1953890.0 1731500.0 1654280.0 1450420.0 1932030.0 1534180.0 1549750.0 1969790.0 1762190.0 True False 2788341.1281345524 1860022.191551318 1843115.2604979535 1811502.2738225826 1564559.8022390828 1919971.4841198595 1689269.8865539073 1544374.2789643693 1612125.7903650135 1746578.3675630756 1.5964592141519551 1.0649520377070314 1.055272007673822 1.0371720544953802 0.8957856293743318 1.0992758869438604 0.9671881422136652 0.8842284478303526 0.9230194420730987 1.0 20.736099946072475 -1.6873814670999054 1.0807412869640138 0.969622002245953 199.9999807374664 0.8868767778773723 0.06540465921652205 161.6051560745953 0.7924384773074363 0.020684311276530393 78992.68121953348 0.020540855758244686 1.6873814670999054 199.03035873522043 S(ph)FTLDDESLK ddPTM_KYSE-520_SHP099_60min_R1 11 SFTLDDESLK 10 0 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(1)FTLDDESLK;S(0.783)FT(0.217)LDDESLK;S(0.775)FT(0.225)LDDESLK;S(0.999)FT(0.001)LDDESLK;S(0.999)FT(0.001)LDDESLK;S(0.989)FT(0.011)LDDESLK;S(0.984)FT(0.016)LDDESLK;S(0.91)FT(0.09)LDDESLK;S(1)FTLDDESLK;S(1)FTLDDESLK;S(1)FTLDDESLK 326.24 4.1097999999999997e-38 13080550000.0 13138040.0 11723380.0 11201910.0 11817550.0 13085660.0 13563650.0 13899890.0 16657340.0 17044760.0 15967460.0 True False 12409246.731166556 11160171.227647867 11924003.042289717 12940686.398924021 14115426.994779365 13478994.229169497 15305026.531053565 16599559.575392395 13949861.247433439 15826000.72689592 0.7841050272465444 0.7051794967177916 0.7534438578677146 0.8176851892172371 0.8919137082301865 0.8516993308525672 0.9670811214511718 1.0488789847697801 0.8814520792815317 1.0 23.91579339281194 -5.990475261973978 0.8054661703297534 0.9827292401538382 0.7310548316288691 0.7692563494510661 0.05041112821541074 0.2929936549817504 0.4212463138665016 0.0300744885084842 0.03870090738496347 1.0221737834017458e-06 5.990475261973978 -0.25167440852496914 S(ph)FTPDHVVYAR ddPTM_KYSE-520_SHP099_60min_R1 1 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 1 S(0.5)FT(0.5)PDHVVYAR 61.11 0.024340999999999998 3324600000.0 458790.0 476960.0 471860.0 592220.0 418850.0 454870.0 418450.0 443250.0 542790.0 468400.0 True False 433340.004124809 454046.12566844415 502276.8506026936 648504.4107425652 451811.1120694972 452030.98760454025 460751.00967844867 441712.4692053274 444233.0186224039 464250.3404096855 0.9334188182660261 0.9780200166741149 1.0819094933984346 1.3968851593523477 0.9732057744336576 0.9736793885937443 0.9924624056750313 0.9514531940149593 0.9568824833394479 1.0 18.824543442448203 S(ph)FVPEEEKHEER ddPTM_KYSE-520_SHP099_60min_R1 3 SFVPEEEKHEER 12 1 A0A0U1RRH6;O94880;O94880-2;B4DG57 A0A0U1RRH6 PHF14 PHD finger protein 14 1 S(1)FVPEEEKHEER;S(1)FVPEEEKHEER;S(1)FVPEEEKHEER 78.932 0.0077006 991840000.0 1083990.0 1043330.0 1062760.0 991690.0 1141980.0 1349510.0 1345470.0 1546160.0 1667020.0 1393020.0 True False 1023858.9138195092 993206.8607297416 1131267.2100761211 1085939.9194375288 1231847.329022618 1341087.2075146816 1481483.2381217883 1540796.7318364587 1364331.1901544223 1380678.926553161 0.7415619186537117 0.7193612081914394 0.8193557447134421 0.7865260333541537 0.8922040492773375 0.9713244561953882 1.073010683099425 1.115970340536035 0.9881596393742674 1.0 20.396946432783547 -6.069358534552548 1.2832386152063677 1.0553985096471232 0.7522360685350716 0.8970500039624411 0.042500541954225764 0.12525229873243346 0.4259509088054638 0.019187682442913672 0.020457792355082542 8.523961224625848e-07 6.069358534552548 -0.3031624411120516 S(ph)GAEVEAGDAAER ddPTM_KYSE-520_SHP099_60min_R1 2 SGAEVEAGDAAER 13 0 A0A087WZ13;Q8IY67-2;E9PAU2;Q8IY67;Q8IY67-3;K7EKR9 A0A087WZ13 RAVER1 Ribonucleoprotein PTB-binding 1 1 S(1)GAEVEAGDAAER;S(1)GAEVEAGDAAER 189.07 2.6057e-08 100317000.0 134892.0 156082.0 192496.0 116292.0 134966.0 153998.0 126680.0 150461.0 157832.0 145611.0 True False 127409.27185946463 148583.5864361416 204904.6001644899 127344.35671553541 145587.05634850604 153036.84135934254 139486.05067765774 149939.08590886122 129173.68742093866 144320.99982364394 0.8828186612839091 1.0295354565011774 1.4197836795398961 0.8823688643450814 1.008772503838036 1.0603920534527138 0.9664986443283072 1.0389277103961476 0.8950442941691448 1.0 17.138921712846294 S(ph)GASEANLIVAK ddPTM_KYSE-520_SHP099_60min_R1 7 SGASEANLIVAK 12 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.999)GAS(0.001)EANLIVAK;S(0.75)GAS(0.25)EANLIVAK;S(0.996)GAS(0.004)EANLIVAK;S(1)GASEANLIVAK;S(1)GASEANLIVAK;S(0.969)GAS(0.031)EANLIVAK;S(0.998)GAS(0.002)EANLIVAK 247.11 1.4983e-15 5292520000.0 5266230.0 4820740.0 4894860.0 4471930.0 4639310.0 4066280.0 4496450.0 5174700.0 5577590.0 4717270.0 True False 4974101.723930765 4589144.414321735 5210390.507652916 4896940.882665218 5004397.302936946 4040900.838210021 4950995.047123096 5156750.173484057 4564840.255601856 4675478.657780531 1.0638700522465847 0.9815346727516067 1.114407933181821 1.0473667491811023 1.0703497265695048 0.8642753253692005 1.0589279535869711 1.1029352395615442 0.9763364544516613 1.0 22.156682639534445 S(ph)GCSDLEEAVDSGADKK ddPTM_KYSE-520_SHP099_60min_R1 1 SGCSDLEEAVDSGADKK 17 1 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 S(0.574)GCS(0.426)DLEEAVDSGADKK 67.928 0.013453999999999999 470340000.0 249260.0 270990.0 249150.0 235970.0 295510.0 268850.0 235410.0 281270.0 345220.0 244100.0 True False 235433.05091250892 257971.23363571733 265210.60765409505 258396.5178530323 318764.9557780996 267172.0074251562 259207.54018019713 280294.34001891164 282536.7502880048 241937.46390692628 0.9731153129846826 1.0662723724960566 1.0961948735484885 1.0680301995413073 1.3175510341826555 1.1043019262528837 1.0713823977253671 1.1585404570775417 1.1678090103345762 1.0 17.884274661728142 -4.336680688850022 1.1918475013218162 1.1363708070354235 0.9157230950137344 0.2557055113209884 0.07926325144374581 1.813396391611188 2.4195322667219195 0.024348135518261472 0.48131151987830556 4.60595097561142e-05 4.336680688850022 -0.2206477120216891 S(ph)GDEEFKGEDELCDSGR ddPTM_KYSE-520_SHP099_60min_R1 8 SGDEEFKGEDELCDSGR 17 1 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 1 S(1)GDEEFKGEDELCDSGR;S(1)GDEEFKGEDELCDSGR;S(1)GDEEFKGEDELCDSGR;S(0.993)GDEEFKGEDELCDS(0.007)GR;S(1)GDEEFKGEDELCDSGR;S(1)GDEEFKGEDELCDSGR;S(1)GDEEFKGEDELCDSGR;S(1)GDEEFKGEDELCDSGR 171.78 3.3005e-08 7063570000.0 6689390.0 5953840.0 5224930.0 5715510.0 6097900.0 5800110.0 6094830.0 6343560.0 6802850.0 6106570.0 True False 6318316.201731645 5667808.589503962 5561737.347983584 6258710.35196926 6577770.037695074 5763909.362048444 6710954.896208616 6321555.670958036 5567623.925892923 6052470.540639573 1.0439234952581826 0.9364454649464575 0.918920184846677 1.0340753102299105 1.086790921744824 0.9523234063423238 1.108795962103016 1.044458726153507 0.9198927757696421 1.0 22.529092721495246 -5.285644208711978 24.00960011984705 1.026307521057544 0.9634312833478782 0.13784715325604446 0.061262299642665656 786.2935844661314 779949.729024757 0.01713499953629195 0.025433992631987225 5.180310497688994e-06 5.285644208711978 -0.06287623770966588 S(ph)GDEMIFDPTMSK ddPTM_KYSE-520_SHP099_60min_R1 15 SGDEMIFDPTMSK 13 0 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK;S(1)GDEMIFDPTMSK 256.13 2.4918000000000003e-17 9432519000.0 17161170.0 16521180.0 13676480.0 14795340.0 15801580.0 14782540.0 14245130.0 15603460.0 17279650.0 16182410.0 True False 16209205.690155735 15727477.714003256 14558087.783941694 16201484.665218828 17045074.447308406 14690276.6845552 15685166.759471288 15549335.239134924 14142101.144528506 16039046.437124483 1.0106090629326563 0.980574361178975 0.9076654177049506 1.0101276736576035 1.0627236796232062 0.9159071109459863 0.977936364294445 0.9694675615592672 0.8817295467014019 1.0 23.93508503659506 -7.544248136103244 24.981723493495778 0.9357760096064617 0.9793226237284485 0.08791608011468577 0.050088961455321955 553.925727963497 647550.2917741836 0.03356602219753687 0.012688944362911746 2.8559583125162755e-08 7.544248136103244 0.04354661412198679 S(ph)GDEMIFDPTMSKK ddPTM_KYSE-520_SHP099_60min_R1 3 SGDEMIFDPTMSKK 14 1 P20042 P20042 EIF2S2 Eukaryotic translation initiation factor 2 subunit 2 1 S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK;S(1)GDEMIFDPTMSKK 146.76 9.797799999999999e-05 116280000.0 1343370.0 1579560.0 1282460.0 1055580.0 1195870.0 1000980.0 722970.0 812280.0 1555390.0 1004500.0 True False 1268850.5881582967 1503675.5666321048 1365129.4236085499 1155902.0058283012 1289978.165430463 994732.5125253215 796054.8631072477 809462.3902675767 1272970.3841911252 995600.9114891739 1.2744570374693696 1.5103195962154918 1.3711612834570956 1.161009388891937 1.295677967490983 0.9991277639927494 0.7995722522155445 0.8130390208831972 1.2785950369280747 1.0 19.925208025567642 -6.048901543731151 1.5040210958921896 0.9497006577640338 1.3698399513260267 0.5650071959701095 0.14948669541029913 0.2823919782739466 1.2985327591710791 0.06301385492459641 0.06756453161020766 8.935080225606768e-07 6.048901543731151 0.42013929356199287 S(ph)GDETPGSEVPGDK ddPTM_KYSE-520_SHP099_60min_R1 7 SGDETPGSEVPGDK 14 0 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(1)GDETPGSEVPGDK;S(1)GDETPGSEVPGDK;S(0.997)GDET(0.003)PGSEVPGDK;S(1)GDETPGSEVPGDK;S(0.994)GDET(0.006)PGSEVPGDK;S(1)GDETPGSEVPGDK;S(0.998)GDET(0.002)PGSEVPGDK 302.41 1.9792e-33 18044500000.0 14988600.0 12188100.0 11090600.0 11622200.0 12222200.0 11939300.0 13158900.0 13314100.0 13462900.0 12075800.0 True False 14157152.478966672 11602565.381288938 11805517.821587417 12726770.393658165 13184017.605194723 11864782.40004154 14489130.030488074 13267916.494634314 11018376.732090792 11968817.806830239 1.1828363258138677 0.9693994485125932 0.9863562142996587 1.0633272725060103 1.1015304784463347 0.991307795935424 1.2105731964789013 1.1085402676162988 0.9205902295382039 1.0 23.512777324558844 -4.237111763553313 23.427882280502793 1.0473909397655317 1.182836707128013 0.2171113640335015 0.0805172655683064 5222.254747919768 5028932.289715393 0.02046200747518234 1.1454023604479049 5.7927960248092924e-05 4.237111763553313 0.13544576736248137 S(ph)GDLGDMEPLK ddPTM_KYSE-520_SHP099_60min_R1 3 SGDLGDMEPLK 11 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 S(1)GDLGDMEPLK;S(1)GDLGDMEPLK;S(1)GDLGDMEPLK 238.01 3.5593e-14 1681280000.0 3911400.0 3421700.0 2677810.0 3313270.0 3586100.0 3447900.0 3616200.0 3782400.0 4040300.0 3555900.0 True False 3694426.8448174056 3257316.395923592 2850425.9172474886 3628162.184629053 3868305.667882114 3426380.3771664337 3981760.7867109673 3769279.7372188005 3306683.3676746036 3524397.4924483337 1.0482435232499714 0.924219360302857 0.8087697041423527 1.029441824426176 1.0975792816135712 0.9721889725855498 1.1297706332054254 1.0694820165135095 0.9382265691539554 1.0 21.74894521436697 -5.484802064824736 24.26143402109395 1.0418275244675654 0.9255106565175826 0.29070182492049146 0.07591621787685263 456.02090728405847 290563.6821543634 0.02135725098254055 0.03166838303839487 3.274899185224592e-06 5.484802064824736 -0.11631686794998286 S(ph)GDLGDMEPLKGT(ph)TPLMQK ddPTM_KYSE-520_SHP099_60min_R1 1 SGDLGDMEPLKGTTPLMQK 19 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-8;O60716-7;A0A669KB62;O60716-23;O60716-15;O60716-16;O60716-24;O60716-27;O60716-29;O60716-31;O60716-32 O60716-5 CTNND1 Catenin delta-1 2 S(1)GDLGDMEPLKGT(0.539)T(0.461)PLMQK 98.01899999999999 0.00055845 554260000.0 944930.0 834380.0 740510.0 870560.0 880910.0 837810.0 891690.0 909620.0 1119200.0 851030.0 True False 892512.8492287453 794295.1323700871 788244.4594578918 953297.7606565908 950232.6053077244 832580.9170201607 981830.727255767 906464.7405269042 915981.4927360395 843490.5362913207 1.058118391171248 0.9416764008550266 0.9345030270566683 1.1301819281198733 1.126548033942064 0.9870661035284075 1.164009179726786 1.0746590525039794 1.0859416357692036 1.0 19.686012356438482 -5.260033904731997 24.999898120321834 1.0857291742616633 0.9744569839908898 0.37661137501082254 0.06053642976568073 121.35794739341479 2158642.176543968 0.01622990270263754 0.026305347793683636 5.494979736837635e-06 5.260033904731997 -0.11127219027077351 S(ph)GDLGDMEPLKGTTPLMQK ddPTM_KYSE-520_SHP099_60min_R1 5 SGDLGDMEPLKGTTPLMQK 19 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-8;O60716-7;A0A669KB62;O60716-23;O60716-15;O60716-16;O60716-24;O60716-27;O60716-29;O60716-31;O60716-32 O60716-5 CTNND1 Catenin delta-1 1 S(1)GDLGDMEPLKGTTPLMQK;S(1)GDLGDMEPLKGTTPLMQK;S(1)GDLGDMEPLKGTTPLMQK;S(1)GDLGDMEPLKGTTPLMQK;S(1)GDLGDMEPLKGTTPLMQK 166.59 6.42e-09 2619080000.0 2878990.0 2702640.0 2422820.0 2423710.0 2706100.0 2393820.0 2140040.0 2266070.0 3509340.0 2435870.0 True False 2719286.6855757213 2572801.1176546537 2578998.853849062 2654058.669685014 2919054.6743971957 2378879.2814375577 2356376.127977694 2258209.5320747136 2872132.319262234 2414290.0868781866 1.1263297233233114 1.0656553376240843 1.0682224426410387 1.0993122508806976 1.2090737108446228 0.9853328290444099 0.9760120131316206 0.9353513665769576 1.1896384510181472 1.0 21.20316760157159 -6.298065367551325 24.99194390965834 1.0106479474271948 1.1077206329628437 0.29865230896715844 0.07326671248294603 757.3791746801292 516799.5145824481 0.025718324548868653 0.022682069234231498 5.034248304244368e-07 6.298065367551325 0.09707268553564896 S(ph)GEGEVSGLMR ddPTM_KYSE-520_SHP099_60min_R1 9 SGEGEVSGLMR 11 0 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 S(1)GEGEVSGLMR;S(1)GEGEVSGLMR;S(1)GEGEVSGLMR;S(1)GEGEVSGLMR;S(1)GEGEVSGLMR;S(1)GEGEVSGLMR;S(1)GEGEVSGLMR;S(1)GEGEVSGLMR;S(1)GEGEVSGLMR 294.49 1.5730999999999999e-28 10841910000.0 5175460.0 4543460.0 3913140.0 3767332.0 4713880.0 4739428.0 4540168.0 5246700.0 5378210.0 4284259.0 True False 4888366.916776274 4325185.3617275 4165387.265645377 4125378.10059033 5084835.537691684 4709847.471850446 4999132.489209654 5228500.42228899 4401662.63764107 4246303.7983630635 1.1512051772321905 1.0185765237510434 0.9809442431441482 0.9715221275926255 1.1974733271914912 1.1091640390087203 1.177290350995801 1.231306253759931 1.036586840380544 1.0 22.017776160707115 -5.760150180546803 24.999999203295374 1.138661153911126 1.026161784629651 0.23945839062941454 0.08048223041219302 42.48952643441617 823937.0525084286 0.023853989976472135 0.02912292798056479 1.7371999950519603e-06 5.760150180546803 -0.11249936928147508 S(ph)GEQIFTQDVRPEQLLEGK ddPTM_KYSE-520_SHP099_60min_R1 10 SGEQIFTQDVRPEQLLEGK 19 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(1)GEQIFTQDVRPEQLLEGK;S(0.998)GEQIFT(0.002)QDVRPEQLLEGK;S(1)GEQIFTQDVRPEQLLEGK;S(1)GEQIFTQDVRPEQLLEGK;S(0.997)GEQIFT(0.003)QDVRPEQLLEGK;S(1)GEQIFTQDVRPEQLLEGK;S(1)GEQIFTQDVRPEQLLEGK;S(1)GEQIFTQDVRPEQLLEGK;S(1)GEQIFTQDVRPEQLLEGK;S(1)GEQIFTQDVRPEQLLEGK 237.2 3.2722e-26 4545258000.0 3649070.0 3397450.0 2967326.0 2579847.0 2616311.0 3128530.0 3020343.0 3215347.0 3614140.0 3455320.0 True False 3446648.8128592963 3234231.4023235803 3158604.5818494675 2825034.883220717 2822199.7909267223 3109003.6838007234 3325668.74614705 3204193.7117246296 2957903.2810552386 3424708.5529982834 1.0064064604393284 0.9443815005782191 0.9222987979762991 0.8248978970042398 0.8240700623870393 0.9078155515098753 0.9710808072224058 0.9356106255872207 0.8636948911946497 1.0 21.707549787460177 -9.346473691489848 14.374096725982687 0.9999999998965002 0.9097330889400921 0.18230286725143074 0.056387672572552006 0.0 0.0 0.059786358968389755 0.014500321941044985 4.5032526007779123e-10 9.346473691489848 -0.09026691095640815 S(ph)GEQITSSPVSPK ddPTM_KYSE-520_SHP099_60min_R1 2 SGEQITSSPVSPK 13 0 A0A087WZV0;O43314-2;O43314;A0A087WWN8 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 S(0.996)GEQIT(0.001)S(0.002)S(0.001)PVSPK;S(1)GEQITSSPVSPK 187.04 2.8891e-08 772090000.0 706000.0 575510.0 556440.0 559000.0 570240.0 524700.0 443670.0 489430.0 557200.0 444080.0 True False 666836.7726238914 547861.6357418789 592309.0127354782 612127.191930521 615114.6437782265 521425.1526724171 488520.4934019284 487732.2815638213 456026.5258689431 440145.7966890125 1.515036103128002 1.244727633123289 1.3457109375827518 1.3907373341634408 1.3975247484024917 1.1846646193030284 1.1099060744798963 1.1081152773303236 1.036080610787137 1.0 18.74762196482121 -6.512688456921643 2.080522768346395 1.0648753084967555 1.3717455975164634 0.8216808580757664 0.06944977743522769 0.13767737927572976 1.19532612607009 0.030268635310371446 0.023418655782674585 3.07122435480992e-07 6.512688456921643 0.3068702890197079 S(ph)GFSSMEKVSKSVIS(ph)AHK ddPTM_KYSE-520_SHP099_60min_R1 1 SGFSSMEKVSKSVISAHK 18 2 Q9NZJ4-2;Q9NZJ4 Q9NZJ4-2 SACS Sacsin 2 S(0.928)GFS(0.157)S(0.149)MEKVS(0.116)KS(0.106)VIS(0.545)AHK 49.287 0.050334 657150000.0 227280.0 102610.0 172560.0 39195.0 153800.0 146200.0 130610.0 159930.0 210880.0 176690.0 True False 214672.32532855254 97680.46157925001 183683.49370576182 42920.081015593525 165903.18499770478 145287.51156986362 143813.33343076138 159375.2401579427 172589.50785219416 175124.66406273982 1.2258257651911582 0.5577767249520902 1.048872782647884 0.2450830169770779 0.9473433447288078 0.8296233562955656 0.8212054778260081 0.9100673569363436 0.9855237055036553 1.0 17.41802275760977 -7.394212781754318 1.2260912323915858 1.0058250272313283 0.7846401244489919 0.07602673277748118 0.25190977206011805 1.187611740707831 3.135869561839595 0.21380173672420041 0.0770684131349397 4.034476761154944e-08 7.394212781754318 -0.22118490278233638 S(ph)GGFADFFTR ddPTM_KYSE-520_SHP099_60min_R1 1 SGGFADFFTR 10 0 O60347 O60347 TBC1D12 TBC1 domain family member 12 1 S(1)GGFADFFTR 99.5 0.0022234999999999998 31604000.0 63440.0 54411.0 63971.0 53097.0 53189.0 44029.0 51913.0 56841.0 57400.0 56835.0 True False 59920.856735495356 51797.013887423964 68094.67301721897 58143.32291580486 57374.67169598771 43754.19867927171 57160.87266205589 56643.831837789105 46977.60693624788 56331.4861169609 1.0637187275883662 0.9195037705889381 1.2088208160500897 1.032163838090159 1.0185186944448943 0.7767272212280179 1.0147233208684205 1.0055447804124975 0.8339493625058713 1.0 15.78165391228949 -6.0170141509138775 24.39972973381675 0.9282415543130321 1.0532268158271947 0.29256890047005835 0.09648670622535163 725.9639232123989 1041093.7389043946 0.031159041467458442 0.03191914098536626 9.615809460241482e-07 6.0170141509138775 0.12498526151416256 S(ph)GGNEVSIEER ddPTM_KYSE-520_SHP099_60min_R1 3 SGGNEVSIEER 11 0 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 S(1)GGNEVSIEER;S(1)GGNEVSIEER;S(1)GGNEVSIEER 201.65 2.8480999999999997e-07 651370000.0 1344948.0 1238907.0 1134395.0 1141590.0 1162918.0 1256203.0 1216993.0 1240178.0 1399553.0 1307073.0 True False 1270341.053352632 1179388.0480826816 1207519.9167961744 1250086.3703684509 1254433.0305016944 1248362.5711121578 1340018.5291470992 1235876.111977721 1145429.4550600427 1295493.3501074072 0.9805847735515665 0.9103775391706183 0.9320927171845852 0.9649500479989406 0.9683052640893074 0.9636194357992328 1.0343692841310228 0.9539810543027926 0.8841646736087662 1.0 20.305070179368087 -5.309405404513585 6.40775469695477 0.9679760606751525 0.9379754182220007 0.0834441166236467 0.03910455001051239 0.5234156459334764 54.15530914098323 0.011343147000636282 0.017107789424632744 4.904498380765067e-06 5.309405404513585 -0.030000642453151816 S(ph)GHFDVTTVASIK ddPTM_KYSE-520_SHP099_60min_R1 2 SGHFDVTTVASIK 13 0 Q8TDM6-4;Q8TDM6;Q8TDM6-2;A0A0A0MSL1;Q8TDM6-5 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.999)GHFDVT(0.001)TVASIK;S(0.958)GHFDVT(0.042)TVASIK 125.28 4.6211e-05 741830000.0 1402810.0 1742460.0 1787690.0 1208060.0 1328860.0 1375010.0 1256580.0 1320760.0 1532420.0 1504080.0 True False 1324993.3328675963 1658749.6061142161 1902927.3578051305 1322873.659183518 1433433.7218208709 1366428.0525559369 1383607.3694389893 1316178.5918277025 1254171.157164545 1490755.0213565317 0.8888068890500208 1.1126909400612421 1.2764856267755766 0.8873850097648855 0.9615488133767944 0.9166013415890011 0.9281252450050164 0.8828939517037675 0.8412993008222746 1.0 20.507611765569045 -5.306225031450116 24.998231286516567 0.9142803910512316 1.094664394654134 0.4119881268362058 0.09621600679182464 406.81015279885685 227070.41972299715 0.027322476647088565 0.04052601088179401 4.94054624241945e-06 5.306225031450116 0.1803840036029023 S(ph)GIDITDFQAK ddPTM_KYSE-520_SHP099_60min_R1 2 SGIDITDFQAK 11 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 S(1)GIDITDFQAK;S(1)GIDITDFQAK 188.96 8.756999999999999e-07 327440000.0 890880.0 924430.0 810950.0 858990.0 823260.0 826950.0 824970.0 1060070.0 1008640.0 1074110.0 True False 841461.1104747502 880018.9952022817 863225.1345658776 940628.1513352384 888045.8782913551 821788.6983084729 908366.0185313176 1056392.8645921978 825496.4017452452 1064594.2210449348 0.7904054839306078 0.8266238702089832 0.8108489765411212 0.8835555676903641 0.834163722417832 0.7719266947568622 0.853250938784663 0.9922962605933676 0.7754094334036427 1.0 20.021872209315237 -13.999999999281858 0.13717049380076826 1.5563235642007653 0.7799671898633723 0.4176733696220839 0.05973564840178185 136.64186021677477 1.1566198685560196 20.690483036107565 0.38676985373730094 1.0000000016535831e-14 13.999999999281858 -0.776356374337393 S(ph)GKNSQEDS(ph)EDSEDKDVK ddPTM_KYSE-520_SHP099_60min_R1 1 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 S(0.608)GKNS(0.393)QEDS(0.997)EDS(0.003)EDKDVK 75.46300000000001 0.007380800000000001 1319600000.0 3436000.0 3144200.0 3316100.0 2944300.0 2982600.0 3158600.0 2847300.0 3053600.0 3807700.0 3017100.0 True False 3245398.230503817 2993147.912459584 3529861.111947601 3224125.3867639266 3217313.6513274005 3138886.005776818 3135132.8709701174 3043007.7743155966 3116317.6643057647 2990370.84126828 1.085282863822794 1.00092867117114 1.1804091530167917 1.0781690826668529 1.0758911928003114 1.0496644638380535 1.048409390468923 1.0176021422898145 1.042117459580387 1.0 21.51189297604973 -6.649357260231374 1.1852613734547315 1.0209518228587016 1.0858900251493793 0.30918924943136505 0.04165866445018083 0.6425244850820677 1.8317252358387393 0.02643349331939492 0.01672174697715976 2.2420368159776962e-07 6.649357260231374 0.0649382022906777 S(ph)GKYDLDFK ddPTM_KYSE-520_SHP099_60min_R1 4 SGKYDLDFK 9 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 S(0.998)GKY(0.002)DLDFK;S(1)GKYDLDFK;S(1)GKYDLDFK;S(1)GKYDLDFK 125.53 0.00043458 1951310000.0 4236130.0 4204610.0 3773000.0 3882750.0 4107940.0 3969710.0 4089550.0 4514360.0 5041510.0 4480350.0 True False 4001143.424384208 4002614.2243517186 4016213.6170134493 4251765.3926086435 4431211.507018668 3944933.567400843 4502961.624161784 4498700.738819546 4126098.8701247885 4440657.584659554 0.9010249829228745 0.9013561951227504 0.904418667831457 0.9574630134276854 0.9978728200810802 0.8883669799330596 1.0140303633672323 1.0130708466152636 0.9291639338233548 1.0 22.08234189992686 -5.314149670534613 3.620965339935392 0.972519767627723 0.9011967461230419 0.42655353956083586 0.037094997682149806 0.23168446744414142 6.204899836883739 0.01073865848944017 0.0172997001881426 4.8512128441811946e-06 5.314149670534613 -0.07132302150468106 S(ph)GLFPR ddPTM_KYSE-520_SHP099_60min_R1 6 SGLFPR 6 0 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 S(1)GLFPR;S(1)GLFPR;S(1)GLFPR;S(1)GLFPR;S(1)GLFPR;S(1)GLFPR 133.79 0.007003699999999999 1994400000.0 1180270.0 1204580.0 1225800.0 1128920.0 1313740.0 1280630.0 1287790.0 1364970.0 1623540.0 1501660.0 True False 1114798.070290086 1146710.168688558 1304817.029349345 1236212.217377827 1417123.863841902 1272637.1131444213 1417972.380819236 1360235.2376563945 1328746.0621128206 1488356.4606738035 0.7490128203464099 0.7704539866541269 0.8766831493838734 0.830588807212335 0.952140096331726 0.8550620410975187 0.9527101996636589 0.913917649163557 0.8927606371334427 1.0 20.505288661938433 -2.038563441073316 0.28020730008579087 0.9570270428463862 6.700605324226693e-21 0.726672160859909 0.03996388219998321 14.841839902157455 0.3511419793665276 0.04301204714386142 6.197621248724118 0.009150325829584516 2.038563441073316 -0.9570270428463862 S(ph)GLLSSFS(ph)LSMTDLSK ddPTM_KYSE-520_SHP099_60min_R1 1 SGLLSSFSLSMTDLSK 16 0 A0A1B0GTU3;Q96L93-5;Q96L93-4;Q96L93;Q96L93-6;Q96L93-2 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 2 S(1)GLLS(0.293)S(0.197)FS(0.297)LS(0.208)MT(0.006)DLSK 84.035 0.0013454 0.0 59240.0 64541.0 66499.0 56608.0 61840.0 60723.0 57144.0 67332.0 81561.0 64338.0 True False 55953.8391079878 61440.35348198395 70785.63194216191 61988.00730018417 66706.45617853086 60344.0052329468 62920.67319169613 67098.44100740702 66751.5783854932 63768.015374206596 0.8774593152952422 0.9634979718505688 1.1100491606454144 0.9720861929985292 1.0460801671038493 0.9463052108307456 0.9867121129999412 1.052227211614736 1.0467877664653402 1.0 15.960545361039554 -4.428605478186981 4.088053561955667 1.0183290053617011 0.8835734459197904 0.48576048390761517 0.044977019056382336 0.19499417211639794 5.431405632519303 0.011358802884328102 0.053158383083067896 3.7273014804569456e-05 4.428605478186981 -0.13475555944191075 S(ph)GLLSSFSLSMTDLSK ddPTM_KYSE-520_SHP099_60min_R1 4 SGLLSSFSLSMTDLSK 16 0 A0A1B0GTU3;Q96L93-5;Q96L93-4;Q96L93;Q96L93-6;Q96L93-2 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 S(0.999)GLLSSFSLSMTDLSK;S(1)GLLSSFSLSMTDLSK;S(1)GLLSSFSLSMTDLSK;S(1)GLLSSFSLSMTDLSK 251.05 1.5179e-23 146552800.0 348919.0 398562.0 380441.0 355790.0 373581.0 353296.0 311098.0 380036.0 482347.0 332123.0 True False 329563.76751721813 379414.48326624156 404964.83558712265 389604.17462783604 402979.69931487285 351090.9486155025 342546.82186389266 378717.7438170693 394764.9437783681 329180.64860778366 1.0011638561107854 1.1526026358806747 1.2302206624230676 1.1835573454138446 1.2241901248424243 1.0665601094729746 1.040604371224855 1.1504860489788653 1.1992349655059087 1.0 18.328520001635674 -6.27844472065956 24.85838032856224 1.0976091825291938 1.163421367086718 0.14966386583416613 0.07865742389265128 1659.6277310024652 2426033.4667974566 0.028819300324094015 0.025473730830658976 5.266902505989279e-07 6.27844472065956 0.06581218455752413 S(ph)GNGNKPPSTDLK ddPTM_KYSE-520_SHP099_60min_R1 1 SGNGNKPPSTDLK 13 1 A0A087WWB9;P51153 A0A087WWB9 RAB13 Ras-related protein Rab-13 1 S(1)GNGNKPPSTDLK 140.28 7.9129e-06 914300000.0 520560.0 662110.0 511850.0 677330.0 745320.0 647260.0 609790.0 669640.0 884920.0 617050.0 True False 491683.4990893667 630301.2417526292 544844.6699889562 741703.2395533095 803972.4437092931 643220.2102510945 671433.5241768928 667317.1751351508 724240.8350178478 611583.4170576358 0.8039516529975342 1.0306055137744674 0.8908754796038065 1.2127589121393902 1.314575283249589 1.0517293182108587 1.0978609057243562 1.0911302637106373 1.1842061357749258 1.0 19.222189763324774 -5.254934081892711 24.86412097717186 1.1421699272742374 0.9206903306638737 0.5294087414947486 0.09799580989029934 395.7250296740738 1512509.848627072 0.02708051007902572 0.04549327108647122 5.559886399625713e-06 5.254934081892711 -0.22147959661036365 S(ph)GNSDSIER ddPTM_KYSE-520_SHP099_60min_R1 2 SGNSDSIER 9 0 A0A5F9ZI51;A0A5F9ZGW5;C9J8U3;A0A0A0MRW7;Q7Z2E3-13;Q7Z2E3-4;Q7Z2E3-5;Q7Z2E3-9;Q7Z2E3-10;Q7Z2E3-11;Q7Z2E3-8;Q7Z2E3-7;Q7Z2E3 A0A5F9ZI51 APTX Aprataxin 1 S(0.649)GNS(0.347)DS(0.004)IER;S(0.918)GNS(0.082)DSIER 143.0 0.00025333 2284600000.0 1322780.0 1273810.0 1220820.0 1185790.0 1285690.0 1247590.0 1090940.0 1046970.0 1263500.0 1303170.0 True False 1249402.756503446 1212614.2555722108 1299516.0105810624 1298487.1250792376 1386866.488424569 1239803.3280399872 1201222.861748371 1043338.3054346358 1034080.2502430165 1291624.9276509178 0.9673108111777764 0.938828470721447 1.0061094229146663 1.0053128406563043 1.073737784657708 0.9598787554331437 0.9300090421242014 0.8077718872553493 0.8006041290358971 1.0 20.300755758878427 -6.922082901662892 2.7106970950101514 0.8545109870946401 0.9955472447998175 0.43553162335153595 0.061716254854828595 0.22863181308172328 3.3889106283307426 0.030416367263296187 0.018335470087745075 1.1965121095435404e-07 6.922082901662892 0.14103625770517736 S(ph)GPFGK ddPTM_KYSE-520_SHP099_60min_R1 3 SGPFGK 6 0 O95235-2;O95235 O95235-2 KIF20A Kinesin-like protein KIF20A 1 S(1)GPFGK;S(1)GPFGK;S(1)GPFGK 75.21300000000001 0.032954000000000004 860630000.0 1778490.0 1657890.0 1512240.0 1485000.0 1612060.0 1513640.0 1601350.0 1687630.0 2029160.0 1597520.0 True False 1679833.6143680797 1578242.4758563747 1609721.4100695488 1626133.9535184677 1738919.9506332867 1504192.8113037506 1763230.0856699334 1681776.0054258045 1660715.6949609192 1583367.215651751 1.060924842805098 0.9967633914958465 1.016644398189683 1.0270099932876993 1.0982417303098615 0.9499961830929976 1.1135951712528964 1.0621515898531133 1.0488506257705543 1.0 20.594564454465388 -5.548098244070514 24.99810636100304 1.0486136600799332 1.0219512595247744 0.04056493206889422 0.045977277241012214 645.4475225150121 639776.5230240297 0.013116657798275023 0.01693411096887532 2.830751563958825e-06 5.548098244070514 -0.026662400555158783 S(ph)GPFVDQLK ddPTM_KYSE-520_SHP099_60min_R1 4 SGPFVDQLK 9 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 S(1)GPFVDQLK;S(1)GPFVDQLK;S(1)GPFVDQLK;S(1)GPFVDQLK 91.31299999999999 0.0039427 820510000.0 1096600.0 1069780.0 979250.0 927590.0 1028600.0 1001020.0 893870.0 955000.0 1239500.0 985190.0 True False 1035769.4119820964 1018386.1630274837 1042374.0218553969 1015747.8747098976 1109544.9680665731 994772.2628704854 984231.1029305155 951687.3278986746 1014438.0452522509 976461.9830662209 1.0607370588352474 1.0429347795288613 1.0675008755406978 1.0402328941883776 1.1362910049835775 1.0187516566152097 1.007956397687802 0.9746281415997882 1.038891490753977 1.0 19.897204350694803 -6.501196483718301 24.88741895197884 1.0046974383216403 1.067440056678181 0.5376556216270565 0.028691824324218136 572.1689453856046 656750.3305446197 0.009958104150996034 0.008698925684888704 3.1535775575073223e-07 6.501196483718301 0.06274261835654071 S(ph)GPIFR ddPTM_KYSE-520_SHP099_60min_R1 6 SGPIFR 6 0 A0A087WYN8 A0A087WYN8 1 S(1)GPIFR;S(1)GPIFR;S(1)GPIFR;S(1)GPIFR;S(1)GPIFR;S(1)GPIFR 86.87200000000001 0.016489 2194200000.0 1838400.0 1792680.0 1735117.0 1964430.0 1929430.0 1519417.0 1477870.0 1732950.0 2311570.0 1581421.0 True False 1736420.2872404582 1706556.9619324622 1846965.4181053585 2151128.8365725833 2081265.1640450002 1509933.7549038827 1627267.5222212644 1726938.80092357 1891847.1579376725 1567410.8402669213 1.1078271520342142 1.0887745051207156 1.178354373120726 1.3724090591374614 1.3278363978206074 0.9633299171560848 1.0381882531475601 1.1017780128593995 1.206988690735035 1.0 20.579951949217097 -6.263677928023421 24.999631171313357 1.0669263087117438 1.2147301317217072 0.3614806960269845 0.10155849750403367 270.47689359900414 3020615.667391416 0.039095567740995645 0.036173347907294505 5.449066047591953e-07 6.263677928023421 0.14780382300996342 S(ph)GPIKPEK ddPTM_KYSE-520_SHP099_60min_R1 2 SGPIKPEK 8 1 Q9H7E2-2;Q9H7E2;Q9H7E2-3 Q9H7E2-2 TDRD3 Tudor domain-containing protein 3 1 S(1)GPIKPEK;S(1)GPIKPEK 66.262 0.017986000000000002 1166440000.0 1477090.0 1299220.0 1216620.0 1125640.0 1346820.0 1359150.0 1161780.0 1285640.0 1514460.0 1313520.0 True False 1395152.8731940845 1236803.5210310228 1295045.2718608256 1232620.4871639924 1452807.0716424503 1350667.0406989069 1279224.0602801458 1281180.4149106324 1239472.240429791 1301883.234703097 1.0716420920131584 0.9500110978179114 0.9947476373763805 0.9467980340380522 1.1159273219873458 1.037471721499613 0.9825950793289702 0.9840977906154649 0.9520609893347776 1.0 20.31216862898827 -6.8774539226201465 7.103312215094059 0.9775638688142902 1.0161636012365367 0.13288735522888306 0.049328207416246043 0.5310735248018369 30.873671056162255 0.021644528289356927 0.014558388608538987 1.3260077958634318e-07 6.8774539226201465 0.03859973242224646 S(ph)GRSPTGNTPPVIDSVSEK ddPTM_KYSE-520_SHP099_60min_R1 1 SGRSPTGNTPPVIDSVSEK 19 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.652)GRS(0.335)PT(0.01)GNT(0.003)PPVIDSVSEK 148.09 1.1355e-06 450700000.0 357230.0 307350.0 274300.0 240340.0 240340.0 247440.0 227790.0 255330.0 380400.0 228290.0 True False 337413.7397796504 292584.44465824496 291981.8168955179 263181.8413391439 259253.3906524598 245895.63517679242 250817.23621616402 254444.3198244699 311328.9491036359 226267.52820693247 1.4912159179600415 1.2930907363369546 1.290427394550784 1.163144545860118 1.1457825729874955 1.08674734340099 1.1084985910429872 1.1245286579158118 1.3759329567559986 1.0 17.787670031837994 -4.150541890619168 0.8344120075543463 1.1403023504770313 1.7300034144089016 0.5807141434199937 0.09229520779523058 2.048418393588054 0.9803001536028562 0.03356533943455684 1.1640535273232773 7.070629964178771e-05 4.150541890619168 0.5897010639318703 S(ph)GSDAGEARPPTPASPR ddPTM_KYSE-520_SHP099_60min_R1 1 SGSDAGEARPPTPASPR 17 1 Q96FS4;F6RY50;E9PIB3 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 S(0.5)GS(0.5)DAGEARPPTPASPR 89.66799999999999 0.00093517 0.0 164660.0 124870.0 151510.0 126290.0 123980.0 150010.0 125540.0 141100.0 168950.0 142560.0 True False 155525.98155842774 118871.05776630886 161276.5770245711 138292.56362952685 133736.5206502955 149073.7319466158 138230.8083523297 140610.55703298765 138272.93888291068 141297.02931000185 1.100702416164801 0.8412849041964569 1.1414010458120438 0.9787365262019537 0.9464920904804107 1.0550379769099891 0.9782994662191734 0.9951416368739919 0.9785976361862754 1.0 17.10837160858155 S(ph)GSELPSILPEIWPK ddPTM_KYSE-520_SHP099_60min_R1 4 SGSELPSILPEIWPK 15 0 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 S(0.988)GS(0.012)ELPSILPEIWPK;S(0.861)GS(0.139)ELPSILPEIWPK;S(0.5)GS(0.5)ELPSILPEIWPK;S(0.795)GS(0.205)ELPSILPEIWPK 226.88 1.2068000000000001e-14 581926000.0 933126.0 856935.0 881705.0 796935.0 870423.0 810852.0 793460.0 907543.0 1091539.0 857927.0 True False 881363.6406394365 815766.5563143409 938541.1150778792 872675.4627927562 938920.3380705924 805791.1718977224 873670.6802233512 904394.9451551278 893343.0330589741 850326.434237105 1.0365003428714732 0.9593569286673177 1.103742136300771 1.0262828810863704 1.1041881097263218 0.9476256875639311 1.0274532756437122 1.0635855934157004 1.0505883353614223 1.0 19.697657262330985 -10.042218843710065 4.498425878482496 0.9999982796346377 1.0350060142460267 0.0448879875109327 0.04905496249949505 8.276951872307637e-07 1.7617252561455895e-07 0.04644637332459414 0.011264346585302301 9.073631889642231e-11 10.042218843710065 0.03500773461138895 S(ph)GSGSIDDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKK ddPTM_KYSE-520_SHP099_60min_R1 1 SGSGSIDDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKK 39 2 I1E4Y6;Q6Y7W6;Q6Y7W6-3;C9J7G1;B8ZZD2;C9JZC0;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(0.464)GS(0.464)GS(0.072)IDDDRDSLPEWCLEDAEEEMGTFDSSGAFLSLKK 208.82 1.2687e-22 43075000.0 8843.9 15786.0 14059.0 9625.2 10255.0 8019.1 8568.4 10371.0 20975.0 10177.0 True False 8353.311237122438 15027.616864730931 14965.265635195346 10539.976114078103 11062.010157031606 7969.0498223658915 9434.577491525433 10335.025421609602 17166.468736721232 10086.839697586189 0.8281395846036307 1.4898240990512703 1.4836426555660025 1.0449235270984183 1.096677501445649 0.7900442617594993 0.9353353254719767 1.0246049041587133 1.7018679042583793 1.0 13.300186614767782 -5.298152033826188 24.303239253965863 1.0677925453294508 1.2894644213001862 0.07703924452878885 0.28199800551649473 916.6602369715356 606813.3941973161 0.08073161129443449 0.11974899379418193 5.033243787642982e-06 5.298152033826188 0.22167187597073545 S(ph)GSIVELIAGGGSSCS(ph)PVLSR ddPTM_KYSE-520_SHP099_60min_R1 1 SGSIVELIAGGGSSCSPVLSR 21 0 P42858 P42858 HTT Huntingtin 2 S(0.689)GS(0.311)IVELIAGGGS(0.007)S(0.023)CS(0.97)PVLSR 155.31 1.0605999999999998e-09 443190000.0 236410.0 211750.0 184470.0 186200.0 199530.0 204190.0 182490.0 207880.0 247380.0 194600.0 True False 223295.86602834903 201577.2121567703 196361.23136243588 203896.39201692885 215231.87582959683 202915.5744695651 200937.87013076825 207158.9127995567 202462.02794231707 192875.9953965092 1.1577172450584299 1.0451130102653436 1.0180698275011455 1.0571372119053188 1.1159080495586244 1.0520519883898294 1.0417982274968207 1.0740523328145892 1.0497004955235676 1.0 17.5573140767281 -8.145379138318678 0.008367829198742627 1.0580037973582229e-07 2.087040984476468 0.2852167963288237 0.036800825280915515 3979.7314557905406 19.165935103275153 2422.008659503995 2355.9833577179525 7.155184910919828e-09 8.145379138318678 2.0870408786760883 S(ph)GSLDDSFSDFQELPASSK ddPTM_KYSE-520_SHP099_60min_R1 2 SGSLDDSFSDFQELPASSK 19 0 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 S(0.5)GS(0.5)LDDSFSDFQELPASSK;S(0.499)GS(0.499)LDDS(0.001)FSDFQELPASSK 277.98 7.454799999999999e-36 298480000.0 318260.0 285280.0 257870.0 259810.0 243460.0 277750.0 250010.0 263430.0 315740.0 279370.0 True False 300605.4833644188 271574.72058598977 274492.71280658816 284502.2642852749 262618.9169020881 276016.4592238691 275283.4506624659 262516.2228150245 258409.57515768116 276894.9991465708 1.0856298751906932 0.9807859348237459 0.9913241974489 1.0274734652563273 0.948442253242263 0.9968271730243973 0.9941799292545118 0.9480713758794355 0.9332403111437032 1.0 18.0789794726285 -1.351739573960217 1.1864783292929781 0.9772984578865208 148.7238716818395 0.5586857429691138 0.027792839161024825 1825.9283580739896 2.445297570389298 0.008607969183670976 734368.2605863467 0.044489797195167165 1.351739573960217 147.746573223953 S(ph)GSLKGPDDPR ddPTM_KYSE-520_SHP099_60min_R1 2 SGSLKGPDDPR 11 1 A8MVZ6;Q96G01-4;Q96G01-3;Q96G01 A8MVZ6 BICD1 Protein bicaudal D homolog 1 1 S(0.718)GS(0.282)LKGPDDPR;S(0.5)GS(0.5)LKGPDDPR 110.38 0.00047731 1715220000.0 2720400.0 2465700.0 2183640.0 2128820.0 2252630.0 2262310.0 2269400.0 2278810.0 2724100.0 2290900.0 True False 2569493.9890170465 2347244.070908845 2324400.928347533 2331142.4127469296 2429899.1652885554 2248190.084128716 2498813.099209631 2270905.3399882545 2229472.1089726947 2270604.4082932277 1.1316343699642901 1.0337529788701616 1.023692599141364 1.0266616255269263 1.070155222289499 0.9901284767691612 1.1005057023948719 1.0001325337403237 0.9818848676721053 1.0 21.114644946480013 -4.261320883212225 4.643168649088353 1.0274427090386986 1.1380098520545578 0.4561933396686132 0.03484876241600304 0.17150753787160633 10.027123456749829 0.008486640990435893 0.06185379064465457 5.478720141280977e-05 4.261320883212225 0.11056714301585924 S(ph)GSPRPTEPTDFLMLFEGSPSGK ddPTM_KYSE-520_SHP099_60min_R1 2 SGSPRPTEPTDFLMLFEGSPSGK 23 1 I3L2J8;Q9UPN4-3;Q9UPN4-2;Q9UPN4 I3L2J8 CEP131 Centrosomal protein of 131 kDa 1 S(0.498)GS(0.498)PRPTEPT(0.003)DFLMLFEGSPSGK;S(0.499)GS(0.499)PRPT(0.001)EPTDFLMLFEGSPSGK 152.35 2.1726999999999996e-07 80101000.0 77543.0 77139.0 58059.0 60480.0 60502.0 56295.0 50421.0 66946.0 93157.0 87568.0 True False 73241.53521186189 73433.12665200046 61801.57603768451 66228.0010160249 65263.163190709514 55943.64202343004 55518.0467415391 66713.77995131389 76242.03709686482 86792.21564687307 0.8438721683273518 0.8460796409527551 0.7120635828578606 0.7630638361104097 0.7519471960047929 0.6445698108577502 0.6396661996442453 0.7686608695732431 0.8784432627813857 1.0 16.40527803337975 -7.946113783887185 2.5559871078729954 0.9974682755325153 0.7411638754288975 0.6093577136044558 0.06559845555448125 0.18843344946688453 2.7234435382196818 0.07025573538955245 0.01918009698284258 1.1321037165062041e-08 7.946113783887185 -0.25630440010361777 S(ph)GSPSDNSGAEEMEVSLAKPK ddPTM_KYSE-520_SHP099_60min_R1 1 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 S(0.542)GS(0.456)PS(0.002)DNSGAEEMEVSLAKPK 118.57 6.5995e-05 1731400000.0 925860.0 1044100.0 770180.0 800920.0 848250.0 861990.0 767920.0 938900.0 863060.0 785510.0 True False 874500.7001438474 993939.8687739498 819827.0351315713 877039.1959946209 915002.4491177053 856610.0006710456 845548.847776972 935643.1750409064 706350.0599720927 778550.992517533 1.123241391441876 1.276653524722809 1.053016492189635 1.1265019304112824 1.175263351934009 1.1002619082163134 1.086054549931012 1.2017750719389593 0.9072624230919412 1.0 19.570432008593954 -7.764008829839689 24.99991162962834 0.9536311528605872 1.1415352182536693 0.5857534398614643 0.0636406908758921 46.698068745541605 454312.0354720691 0.0513896511699145 0.01564279025486089 1.72183356724458e-08 7.764008829839689 0.18790406539308213 S(ph)GSQPACLDHMQDR ddPTM_KYSE-520_SHP099_60min_R1 1 SGSQPACLDHMQDR 14 0 O75815;O75815-3 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 S(0.5)GS(0.5)QPACLDHMQDR 100.28 0.011717 0.0 231270.0 201970.0 202710.0 197790.0 220620.0 196540.0 205470.0 226830.0 224070.0 215050.0 True False 218440.99207468482 192267.05803684963 215777.01094746785 216587.9021322679 237981.5388439117 195313.32095718887 226240.9127939556 226043.1796725199 183384.53634503603 213144.82430636836 1.0248477427756064 0.9020489175026384 1.012349287155648 1.01615370130194 1.1165250651446443 0.9163409038562954 1.0614422073358125 1.0605145135854288 0.860375272736833 1.0 17.70147449789164 -1.3464643558351335 12.844178350816437 0.9999213175004426 0.9507699878752528 0.0 0.07624293913510295 0.0 0.0 0.01685402770190144 0.0 0.04503349404363926 1.3464643558351335 -0.049151329625189755 S(ph)GSRDSTPSRPAQQPLSRPIQSPGR ddPTM_KYSE-520_SHP099_60min_R1 2 SGSRDSTPSRPAQQPLSRPIQSPGR 25 3 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.372)GS(0.311)RDS(0.25)T(0.064)PS(0.002)RPAQQPLSRPIQSPGR;S(0.512)GS(0.455)RDS(0.016)T(0.016)PS(0.002)RPAQQPLSRPIQSPGR 94.929 0.004777399999999999 1323980000.0 392690.0 387560.0 406070.0 417451.0 348650.0 383280.0 451930.0 363607.0 495740.0 390754.0 True False 370906.70289189246 368941.0358605797 432245.9219349724 457125.4175287799 376086.77145285887 380887.8073495027 497615.49481176044 362345.7321835121 405726.1125884235 387292.2235620118 0.9576920999873995 0.9526166894531158 1.1160717815594425 1.1803113765737325 0.9710671905413077 0.9834636075219733 1.284857956183786 0.9355874198839799 1.047596847819125 1.0 18.563063008229733 -4.746424173656294 24.498617023980373 1.0682912854596354 0.9551542725396585 0.15936992950746398 0.10054651802445462 337.87273597132094 551257.0180536354 0.02557974576844278 0.0670456521870117 1.7929815735406697e-05 4.746424173656294 -0.11313701291997691 S(ph)GSS(ph)PGLR ddPTM_KYSE-520_SHP099_60min_R1 1 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.506)GS(0.506)S(0.988)PGLR 68.893 0.025602 260180000.0 792660.0 676490.0 663670.0 701570.0 774420.0 739930.0 768220.0 713440.0 913030.0 768250.0 True False 748689.5696714645 643990.4049678087 706451.230109545 768247.0018652881 835362.4481529417 735311.822406903 845879.1747046906 710965.2431581472 747246.7676132828 761443.9026894554 0.9832498060947865 0.8457489812357871 0.9277784320214875 1.0089344719312925 1.097076810520647 0.965680885761574 1.1108883684234725 0.9337066600008022 0.9813549822566998 1.0 19.538378228427312 -5.234492216256598 4.461529849991256 1.0170979408973877 0.9093500963884116 0.34447585386155144 0.05998516767146334 0.2105943730496884 10.45929904558615 0.016383127285253932 0.028085376955604126 5.8278421978787535e-06 5.234492216256598 -0.10774784450897612 S(ph)GSVSNYR ddPTM_KYSE-520_SHP099_60min_R1 1 SGSVSNYR 8 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 S(0.584)GS(0.416)VS(0.001)NYR 91.584 0.0093399 1051800000.0 3305900.0 2724500.0 2523000.0 2644300.0 2504300.0 2872400.0 2876800.0 3129100.0 3533200.0 3179800.0 True False 3122515.1368517387 2593610.9304421274 2685636.6169427326 2895613.476962217 2701374.1624821317 2854472.286137317 3167615.018862375 3118245.8824374313 2891659.944723883 3151629.445846969 0.9907621408241393 0.8229428538497235 0.8521422531071049 0.9187671097494934 0.8571357162695136 0.9057131668504912 1.0050721613343443 0.98940752268528 0.9175126690526204 1.0 21.58766648861547 -6.634488790740952 5.33657578338837 0.9766129568491586 0.8841745586352694 0.4395005270170206 0.04811125209136867 0.19200990012633726 8.252456611385243 0.018294043419983915 0.014006844080423719 2.320124067831932e-07 6.634488790740952 -0.09243839821388922 S(ph)GTFDLLEMDR ddPTM_KYSE-520_SHP099_60min_R1 6 SGTFDLLEMDR 11 0 H0YA31;H0YA26;E9PHT6;Q9NVE7 H0YA31 PANK4 Pantothenate kinase 4 1 S(0.838)GT(0.162)FDLLEMDR;S(0.96)GT(0.04)FDLLEMDR;S(0.997)GT(0.003)FDLLEMDR;S(0.999)GT(0.001)FDLLEMDR;S(0.983)GT(0.017)FDLLEMDR;S(0.973)GT(0.027)FDLLEMDR 158.25 2.4435999999999998e-05 226072500.0 634387.0 641990.0 557113.0 578072.0 626979.0 644038.0 575390.0 654923.0 717957.0 634095.0 True False 599196.2884908677 611147.8367533647 593025.3953923173 633011.7890763154 676318.6802774761 640018.3199482347 633556.0364652469 652651.2249731773 587594.1070231311 628477.4116184451 0.9534094263592178 0.9724260975100862 0.943590627808194 1.0072148614636658 1.0761224950564745 1.018363282619927 1.008080839108797 1.0384640925955957 0.9349486491646025 1.0 19.261501367480882 -5.341182878283514 5.801116865466026 1.0167466847321507 0.95823999390142 0.35416342294927994 0.03395213095686096 0.23601171185941847 13.32535136857496 0.009634066535746753 0.01446002928077795 4.558449225115098e-06 5.341182878283514 -0.05850669083073068 S(ph)GTPTQDEMMDKPTSSSVDTMSLLSK ddPTM_KYSE-520_SHP099_60min_R1 7 SGTPTQDEMMDKPTSSSVDTMSLLSK 26 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.474)GT(0.474)PT(0.039)QDEMMDKPT(0.003)S(0.003)S(0.003)S(0.003)VDT(0.001)MSLLSK;S(0.796)GT(0.191)PT(0.013)QDEMMDKPTSSSVDTMSLLSK;S(0.467)GT(0.427)PT(0.106)QDEMMDKPTSSSVDTMSLLSK;S(0.491)GT(0.491)PT(0.018)QDEMMDKPTSSSVDTMSLLSK;S(0.499)GT(0.499)PT(0.001)QDEMMDKPTSSSVDTMSLLSK;S(0.512)GT(0.469)PT(0.019)QDEMMDKPTSSSVDTMSLLSK;S(0.46)GT(0.46)PT(0.079)QDEMMDKPTSSSVDTMSLLSK 102.51 0.0016785999999999997 2407400000.0 1804530.0 2167930.0 1744990.0 1506180.0 1444040.0 1832180.0 1538700.0 1860320.0 2360200.0 2056150.0 True False 1704429.123658627 2063779.3886707274 1857474.8474827183 1649326.8943504707 1557677.7325363148 1820744.6850073368 1694246.8122648562 1853866.9841219538 1931647.175800214 2037934.110660496 0.8363514378324137 1.0126820969701789 0.9114499030004014 0.8093131596957875 0.764341557652946 0.8934266694310505 0.8313550489204725 0.909679549708854 0.9478457452062402 1.0 20.958675977177254 -7.818304427724387 1.9569664636597168 0.9968270327194494 0.8680621388390342 0.32354986494098326 0.06367974550718938 0.41372446671751445 3.192614360373181 0.06547002564793226 0.01886596752567081 1.5194820438861005e-08 7.818304427724387 -0.12876489388041523 S(ph)GTTPKPVINSTPGR ddPTM_KYSE-520_SHP099_60min_R1 2 SGTTPKPVINSTPGR 15 1 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 S(0.333)GT(0.333)T(0.333)PKPVINSTPGR;S(0.361)GT(0.319)T(0.319)PKPVINSTPGR 54.763999999999996 0.041053 1526880000.0 2158810.0 2373000.0 1595690.0 1435140.0 1694490.0 2198700.0 1643930.0 2314500.0 2466200.0 2466200.0 True False 2039056.5058189593 2258997.5180543847 1698550.7305942706 1571535.2741094271 1827836.7226707446 2184977.097733647 1810114.4876106863 2306471.5397083596 2018400.2478427598 2444351.3866745643 0.8341912365525354 0.9241705306239355 0.6948881162724629 0.6429252695323129 0.7477798538439429 0.893888296766618 0.7405295725805077 0.9435924606757197 0.8257406274916583 1.0 21.22102026338971 -7.264536155974683 24.936863517906435 0.9134999135423939 0.7822604106332018 0.33597926143813994 0.09020209147865287 360.2477540747371 2900868.6944296206 0.04995373247619891 0.02556936233289984 5.438308547161175e-08 7.264536155974683 -0.13123950290919206 S(ph)HDDGNIDLESDSFLKFDSEPSAVALELPTR ddPTM_KYSE-520_SHP099_60min_R1 1 SHDDGNIDLESDSFLKFDSEPSAVALELPTR 31 1 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;P18583-8 P18583-10 SON Protein SON 1 S(0.401)HDDGNIDLES(0.299)DS(0.299)FLKFDSEPSAVALELPTR 84.552 0.0027145 73840000.0 57560.0 54687.0 62281.0 62553.0 49333.0 53644.0 46220.0 54251.0 72203.0 60380.0 True False 54367.032056984724 52059.75443313951 66295.73291312337 68498.01831275476 53215.226433626565 53309.18789776857 50892.36866373015 54062.8159432786 59092.75528951056 59845.08017492915 0.9084628493782294 0.8699086755497215 1.107789190345117 1.144588963913705 0.8892163946990579 0.8907864730391212 0.8504018795692156 0.9033794555083091 0.9874287930901 1.0 15.86894502857325 S(ph)HDNVYSLGGLEGR ddPTM_KYSE-520_SHP099_60min_R1 2 SHDNVYSLGGLEGR 14 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 S(1)HDNVYSLGGLEGR;S(1)HDNVYSLGGLEGR 191.78 5.6815e-11 873380000.0 535600.0 559440.0 463850.0 628700.0 486420.0 507400.0 543500.0 588350.0 565440.0 541670.0 True False 505889.2003078703 532563.6626634409 493750.5131862402 688451.4589744522 524698.4866487877 504233.1283895272 598442.2840488387 586309.1511719225 462770.3495824386 536871.2252128832 0.9422915152647122 0.9919765441931923 0.9196814617703817 1.2823400224168535 0.9773265207885399 0.9392068427388446 1.1146849671660852 1.0920852592526928 0.8619764439767438 1.0 19.034216557012385 -2.379813803096579 12.288172293974682 1.0189447311516162 0.9769340947631092 0.0 0.11551500191099132 0.0 0.0 0.026107910604407893 0.0 0.0041704814795636026 2.379813803096579 -0.042010636388506994 S(ph)HDRLPYQR ddPTM_KYSE-520_SHP099_60min_R1 3 SHDRLPYQR 9 1 H3BUL5;H3BVF8;P49761-3;P49761-1;P49761;H3BRT8;H3BQR7;H3BV35;H3BRK0;P49761-2 H3BUL5 CLK3 Dual specificity protein kinase CLK3 1 S(1)HDRLPYQR;S(1)HDRLPYQR;S(1)HDRLPYQR 140.91 0.0002673 3957790000.0 1400690.0 1405780.0 1245240.0 1311050.0 1299810.0 1370500.0 1382460.0 1329720.0 1415890.0 1260200.0 True False 1322990.93349371 1338244.2186811995 1325510.1628544456 1435651.7978184426 1402097.6520927614 1361946.2011388368 1522212.5483093965 1325107.5116789811 1158800.067682299 1249035.6084207643 1.0592099413134042 1.0714219912218734 1.0612268808976335 1.149408221943031 1.1225441793973538 1.0903982175983218 1.2187102898003261 1.060904511244799 0.9277558300739274 1.0 20.25238317626185 -7.588463693788861 5.553677744383822 0.968306157435091 1.1103396355045339 0.5916185944164917 0.04809004977779437 0.14342481033368687 8.347053718337264 0.03484028946854976 0.012672197115928084 2.579504597201982e-08 7.588463693788861 0.1420334780694429 S(ph)HDRPPR ddPTM_KYSE-520_SHP099_60min_R1 2 SHDRPPR 7 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(1)HDRPPR;S(1)HDRPPR 57.55 0.033649 324530000.0 147032.0 128382.0 120352.0 197953.0 171996.0 185724.0 164625.0 165612.0 124872.0 198237.0 True False 138875.84185897448 122214.33601468941 128110.08249000862 216766.39360326037 185531.10667662698 184564.82762517998 181266.90158517036 165037.53062613143 102198.39256695386 196480.77440605246 0.7068164418569012 0.622016766699616 0.6520235014203113 1.1032448047832155 0.9442710475743719 0.9393531157595773 0.9225681348881458 0.8399678346394361 0.5201444918765838 1.0 17.584028626482958 -5.214627755190595 24.18377115290965 0.89395037595234 0.6564583971133253 0.3598317773002907 0.1438228192220916 328.1803258492691 169543.22076660173 0.040363980948062435 0.06991212299569453 6.100595707323447e-06 5.214627755190595 -0.23749197883901463 S(ph)HDRPPRR ddPTM_KYSE-520_SHP099_60min_R1 1 SHDRPPRR 8 2 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(1)HDRPPRR 61.353 0.025152 244710000.0 27168.0 28057.0 28584.0 37158.0 24702.0 31683.0 22728.0 28532.0 28831.0 21807.0 True False 25660.9368819347 26709.09960558441 30426.57037601703 40689.48514803991 26645.906864845896 31485.254644787867 25025.56804390434 28433.029151418858 23596.01717036521 21613.806945589287 1.1872474361658583 1.2357424896420164 1.4077376767828564 1.8825691027254863 1.2328187686659942 1.4567195276634521 1.1578510026902635 1.3155030589010217 1.0917103696616681 1.0 14.399665583065923 -7.566727478233178 0.9001116863547103 1.0074926420786543 1.4058585292348877 0.3148995561817066 0.194227427169185 0.7122676804040974 1.128108054858012 0.19028320432229964 0.07235133480599813 2.7118928231891942e-08 7.566727478233178 0.39836588715623344 S(ph)HEAEVLK ddPTM_KYSE-520_SHP099_60min_R1 13 SHEAEVLK 8 0 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK;S(1)HEAEVLK 150.61 0.00026994 30011700000.0 27307190.0 29536450.0 27559620.0 29706390.0 30620610.0 32526930.0 29789700.0 34628000.0 32391470.0 32005170.0 True False 25792405.735166326 28117474.606884692 29336157.202151112 32529676.374048132 33030277.799561564 32323917.364617936 32801133.595454816 34507883.550235994 26509995.570509832 31721629.09344544 0.8130857863316908 0.886381797229151 0.9247998302903292 1.0254730700690797 1.041254145626037 1.018986675287019 1.0340305505379115 1.0878345323496097 0.8357072548959198 1.0 24.918963528087076 -4.822522019075163 1.6440701618443454 1.0131478250598902 0.8208239236268352 0.5013190499185891 0.06356557196097984 0.34230999146725893 1.6753325029320953 0.01827020971273873 0.07516364968631038 1.5047972224540512e-05 4.822522019075163 -0.192323901433055 S(ph)HGLESVPVLPGSGEAGVSFDLPAQADTLHSANK ddPTM_KYSE-520_SHP099_60min_R1 2 SHGLESVPVLPGSGEAGVSFDLPAQADTLHSANK 34 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 S(0.873)HGLES(0.127)VPVLPGSGEAGVSFDLPAQADTLHSANK;S(0.998)HGLES(0.002)VPVLPGSGEAGVSFDLPAQADTLHSANK 175.28 3.0532e-10 2262450000.0 438190.0 661100.0 587230.0 832400.0 588990.0 568720.0 520550.0 558200.0 708110.0 535510.0 True False 413882.7271898911 629339.7636686695 625083.7854012209 911511.0457298136 635340.162105319 565170.4075240281 573172.274078423 556263.7344848595 579535.0740004609 530765.7980204757 0.7797840944791331 1.1857202668593787 1.177701705220099 1.7173507583370127 1.197025438479382 1.0648206980025212 1.0798967759718223 1.0480399011380914 1.0918847374150207 1.0 19.017715882416923 -6.219612306971397 5.326992657892273 1.0609770778663974 1.2378913419470887 0.11186375445236252 0.21264978111135463 0.45766310592679527 33.24339248243738 0.0759734164941424 0.07461153169114719 6.030977288833606e-07 6.219612306971397 0.17691426408069133 S(ph)HHAASTTTAPTPAAR ddPTM_KYSE-520_SHP099_60min_R1 1 SHHAASTTTAPTPAAR 16 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 S(1)HHAASTTTAPTPAAR 105.71 0.00039485 404620000.0 33352.0 64528.0 71482.0 99302.0 52126.0 64947.0 53786.0 41520.0 43764.0 48612.0 True False 31501.898074436325 61427.97802149734 76089.84409524385 108739.63222376507 56228.01964363041 64541.641682133624 59223.21378077433 41375.97681084085 35817.5608006612 48181.335499563684 0.6538195288240111 1.2749330707542057 1.5792390000466654 2.25688290073964 1.167008325124977 1.339556926202639 1.2291733545100807 0.8587552914803606 0.7433907846117208 1.0 15.556186762579856 -7.076557430473901 1.9406589294363517 0.8346965183355619 1.4212007602386314 0.2613833448673848 0.37951817474587385 0.48937212804377556 3.5645201383876572 0.2575336930857674 0.12384173006932647 8.383832047091416e-08 7.076557430473901 0.5865042419030695 S(ph)HNDFVAILDLPEGEHQYK ddPTM_KYSE-520_SHP099_60min_R1 9 SHNDFVAILDLPEGEHQYK 19 0 O43741 O43741 PRKAB2 5-AMP-activated protein kinase subunit beta-2 1 S(1)HNDFVAILDLPEGEHQYK;S(1)HNDFVAILDLPEGEHQYK;S(1)HNDFVAILDLPEGEHQYK;S(1)HNDFVAILDLPEGEHQYK;S(1)HNDFVAILDLPEGEHQYK;S(1)HNDFVAILDLPEGEHQYK;S(1)HNDFVAILDLPEGEHQYK;S(1)HNDFVAILDLPEGEHQYK;S(1)HNDFVAILDLPEGEHQYK 195.03 9.9425e-13 2047508000.0 3947418.0 3549503.0 3138283.0 3473013.0 3204243.0 3280111.0 3074101.0 3631033.0 3789946.0 3165662.0 True False 3728446.8545573098 3378979.547967379 3340581.7436103346 3803087.111320569 3456398.6944512334 3259638.610553601 3384861.129414571 3618437.7940124725 3101787.343163847 3137616.697527765 1.188305396734751 1.0769255373448874 1.0646876485080197 1.2120942351935948 1.1016000447647565 1.0388899998913128 1.0788000752550873 1.1532440520422915 0.988580710195688 1.0 21.58123768761106 -7.834746676390984 0.3519286375991956 0.9865338639271346 1.134920376969185 0.34040684766663865 0.0577940287016275 1.8913726310005825 0.7096547035637794 0.10359728226302352 0.06617953379971064 1.463030309975294e-08 7.834746676390984 0.1483865130420503 S(ph)HNNFVAILDLPEGEHQYK ddPTM_KYSE-520_SHP099_60min_R1 14 SHNNFVAILDLPEGEHQYK 19 0 Q9Y478 Q9Y478 PRKAB1 5-AMP-activated protein kinase subunit beta-1 1 S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK;S(1)HNNFVAILDLPEGEHQYK 212.97 1.0011e-18 24016991000.0 13319072.0 12890462.0 11482559.0 12176222.0 10454078.0 11672290.0 10928485.0 12268448.0 13810560.0 11291773.0 True False 12580236.525248224 12271184.856542079 12222743.125883974 13333446.477965377 11276754.463032737 11599438.90849387 12033242.915535377 12225891.617365288 11302910.439886201 11191736.676086448 1.124064735380042 1.0964504626669875 1.0921221147027604 1.191365278139107 1.0075964784918454 1.0364288621334852 1.0751899605757334 1.092403437572699 1.0099335578576736 1.0 23.415930587887118 -5.777692861337749 24.99976085583201 1.0434339586108563 1.1214700466791248 0.5697176716177195 0.0375872480042109 203.57195918577108 313116.16899514967 0.0118404644879469 0.013466238748768525 1.668426728331137e-06 5.777692861337749 0.07803608806826845 S(ph)HS(ph)DNDRFK ddPTM_KYSE-520_SHP099_60min_R1 3 SHSDNDRFK 9 1 O75494;O75494-2 O75494 SRSF10 Serine/arginine-rich splicing factor 10 2 S(1)HS(1)DNDRFK;S(1)HS(1)DNDRFK;S(1)HS(1)DNDRFK 110.51 0.00061738 2050350000.0 3489610.0 3874460.0 3438540.0 3228090.0 3473170.0 3787540.0 3407640.0 4567050.0 4006920.0 3475280.0 True False 3296034.3769349325 3688325.125916974 3660193.7902585226 3534886.7030393486 3746488.7193659167 3763900.5579433725 3752117.5065615196 4551207.969507486 3279364.3342332826 3444491.7229269296 0.9569000717859625 1.070789371147871 1.0626223212835308 1.0262433436871803 1.0876753439205153 1.0927303244453808 1.0893094855147998 1.3213003065776372 0.9520604483980785 1.0 21.7158596805809 -5.9331603524139025 1.4120205282534373 1.113901215869316 1.0301950711264798 0.06595903776912315 0.09555813545446237 0.903999045785191 3.7352064122224555 0.03759226105546578 0.04472371372198262 1.1663788812133669e-06 5.9331603524139025 -0.08370614474283622 S(ph)HS(ph)LKDLAMVE ddPTM_KYSE-520_SHP099_60min_R1 1 SHSLKDLAMVE 11 1 O75691 O75691 UTP20 Small subunit processome component 20 homolog 2 S(1)HS(1)LKDLAMVE 46.73 0.062573 67148000.0 44529.0 44287.0 38980.0 14366.0 20069.0 20740.0 16988.0 31614.0 59728.0 34899.0 True False 42058.887603639225 42159.38604385776 41492.71317020518 15731.340320704603 21648.316123009987 20610.55396688762 18705.31282690281 31504.33841276308 48882.90082035217 34589.82201101115 1.2159324667889417 1.2188379006528844 1.1995642289514121 0.4547967987721003 0.6258579797293715 0.5958560284099339 0.5407750528738845 0.910797933644589 1.413216315619983 1.0 15.078059969597607 -5.1850897619325 10.336224599771866 0.7624905202847511 1.21332290378633 0.3447332231532144 0.26311869431105 0.6893009615622392 90.68010018471064 0.0757573869224731 0.13136816781025748 6.529955746432124e-06 5.1850897619325 0.45083238350157895 S(ph)HS(ph)LPISHKK ddPTM_KYSE-520_SHP099_60min_R1 2 SHSLPISHKK 10 1 C9JG08 C9JG08 2 S(0.667)HS(0.667)LPIS(0.667)HKK;S(0.714)HS(0.714)LPIS(0.572)HKK 47.261 0.039344 3151600000.0 519870.0 2206430.0 1938470.0 1355840.0 1600180.0 727230.0 1617700.0 1112780.0 2758080.0 100088.0 True False 491031.7747648479 2100429.7908810475 2063426.8778616616 1484698.6259518408 1726105.062221243 722691.0878177286 1781232.9032305563 1108920.0259048045 2257282.1975387926 99201.29818728576 4.949852307757213 21.17341032085658 20.80040196617228 14.966524159278883 17.400024936795344 7.285097080618176 17.955741868092304 11.178483005446498 22.75456308320872 1.0 16.59807137996104 -9.11850633887545 11.35586804777045 1.000002567217551 15.475033224308389 0.3676028776858016 5.659112384665279 0.0 0.0 5.235681367654114 1.2698391773069497 7.611910287325296e-10 9.11850633887545 14.475030657090837 S(ph)HS(ph)PMSNR ddPTM_KYSE-520_SHP099_60min_R1 1 SHSPMSNR 8 0 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 2 S(1)HS(0.978)PMS(0.022)NR 86.344 0.005307500000000001 517090000.0 497820.0 568300.0 561100.0 583870.0 514570.0 519100.0 566710.0 608740.0 616140.0 571420.0 True False 470204.9322204331 540998.0149643085 597269.4037917419 639360.8292530837 555063.7314971975 515860.10434963234 623998.5773566102 606628.4230209844 504264.5076254315 566357.6633580327 0.8302261320743972 0.9552232625522139 1.0545798925901844 1.1288994051253807 0.980058657997366 0.9108380405608153 1.101774757768465 1.071104819919235 0.8903640583506187 1.0 19.111353898850915 -4.375080856396019 2.938956765536179 1.021227394462943 0.81952912399946 0.374941106670323 0.07315220517756418 0.33402648498051685 4.567177244983906 0.019373802478783564 0.1367934738798953 4.216179998163019e-05 4.375080856396019 -0.2016982704634831 S(ph)HSDNDRFK ddPTM_KYSE-520_SHP099_60min_R1 3 SHSDNDRFK 9 1 O75494;O75494-2 O75494 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.993)HS(0.007)DNDRFK;S(0.902)HS(0.098)DNDRFK;S(0.999)HS(0.001)DNDRFK 97.779 0.0018873000000000002 2857540000.0 1892150.0 1890040.0 1735750.0 1661930.0 1774110.0 1788600.0 1445080.0 1643760.0 2487420.0 1608430.0 True False 1787188.6675924875 1799239.641392124 1847639.2222981935 1819879.3275225265 1913722.3636949125 1777436.683952518 1591162.7890217027 1638058.1802164672 2035767.2307554306 1594180.5615396048 1.1210704174353263 1.1286297705540207 1.1589899330561446 1.1415766641671692 1.2004426661975511 1.1149531783500928 0.9981070070789299 1.0275236191780477 1.2769991554716718 1.0 20.604383611754805 -6.5252847206165185 24.986963068824775 1.0748909360583219 1.149836032447514 0.17386564601708632 0.07654151011504806 140.05010306963192 1454430.183248236 0.02875469294395392 0.022409631305281407 2.9834260630581006e-07 6.5252847206165185 0.07494509638919222 S(ph)HSDNDRPNCSWNTQYSSAYYTSR ddPTM_KYSE-520_SHP099_60min_R1 7 SHSDNDRPNCSWNTQYSSAYYTSR 24 1 O75494-3;O75494-6 O75494-3 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.927)HS(0.067)DNDRPNCS(0.005)WNT(0.001)QYSSAYYTSR;S(0.949)HS(0.051)DNDRPNCSWNTQYSSAYYTSR;S(0.842)HS(0.155)DNDRPNCS(0.003)WNTQYSSAYYTSR;S(0.994)HS(0.006)DNDRPNCSWNTQYSSAYYTSR;S(0.99)HS(0.01)DNDRPNCSWNTQYSSAYYTSR;S(0.779)HS(0.221)DNDRPNCSWNTQYSSAYYTSR;S(0.25)HS(0.25)DNDRPNCS(0.25)WNT(0.25)QYSSAYYTSR 170.77 1.2699e-10 12662900000.0 184518.0 366066.0 280926.0 450695.0 272145.0 369193.0 246084.0 344515.0 363838.0 256381.0 True False 174282.41871248637 348479.63988373155 299034.93945749255 493528.9172936071 293561.263206764 366888.72954180994 270960.5722683985 343319.9578754057 297774.1908095916 254109.66380139964 0.6858551387038057 1.3713749987725266 1.1767948333173366 1.9421886988104728 1.155254226915974 1.443820451584845 1.0663135286352932 1.3510700566812315 1.171833398049427 1.0 17.955091716625585 -6.765593056577855 24.98511227617569 1.1765601155853138 1.3168853487575092 0.04812492830755155 0.30460448773012827 407.21586791171995 2449437.6335469927 0.12410146302298904 0.08706684386214901 1.7155640756392873e-07 6.765593056577855 0.14032523317219536 S(ph)HSGTSPDNTAPPPPPPRPQPSHSR ddPTM_KYSE-520_SHP099_60min_R1 6 SHSGTSPDNTAPPPPPPRPQPSHSR 25 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.25)HS(0.25)GT(0.25)S(0.25)PDNTAPPPPPPRPQPSHSR;S(0.286)HS(0.256)GT(0.229)S(0.229)PDNTAPPPPPPRPQPSHSR;S(0.274)HS(0.242)GT(0.242)S(0.242)PDNTAPPPPPPRPQPSHSR;S(0.352)HS(0.292)GT(0.292)S(0.064)PDNTAPPPPPPRPQPSHSR;S(0.284)HS(0.284)GT(0.284)S(0.148)PDNTAPPPPPPRPQPSHSR;S(0.267)HS(0.233)GT(0.233)S(0.267)PDNTAPPPPPPRPQPSHSR 120.64 0.00014193 7257530000.0 649549.0 802259.0 696557.0 990588.0 726922.0 684936.0 596389.0 534254.0 728056.0 493159.0 True False 613517.2221261713 763717.2734246898 741458.1787506049 1084733.1856888565 784126.625779594 680661.0603598906 656677.8203157363 532400.7975698215 595859.3831982041 488789.99493189587 1.2551754914943665 1.562465028628706 1.5169258504440415 2.2192213362304902 1.6042198774728356 1.3925429477228324 1.3434763950257056 1.0892219625812962 1.2190498769951836 1.0 18.89885522929504 -6.743342526231281 1.628113032803633 1.118978933436943 1.6465516364817794 0.47995375656386363 0.23504748783513155 0.3572405034548167 1.9336635579260857 0.1384244610968204 0.08549235596068827 1.8057493772990361e-07 6.743342526231281 0.5275727030448363 S(ph)HSLPSSIIF ddPTM_KYSE-520_SHP099_60min_R1 2 SHSLPSSIIF 10 0 Q86Z20-2;Q86Z20 Q86Z20-2 CCDC125 Coiled-coil domain-containing protein 125 1 S(0.5)HS(0.5)LPSSIIF;S(0.68)HS(0.32)LPSSIIF 85.53299999999999 0.0043599 88641000.0 203722.0 215125.0 203708.0 268290.0 193772.0 199319.0 196490.0 202336.0 250260.0 220666.0 True False 192421.13455026122 204790.0720907917 216839.34362432396 293788.20093567006 209020.7539881356 198074.9761873712 216353.12675760136 201634.1436415776 204819.09254120872 218711.07091555008 0.8797960420785463 0.936349820946496 0.9914420093898729 1.3432708262359028 0.9556935234835179 0.9056467757128445 0.9892189080869199 0.9219201515383447 0.9364825094761416 1.0 17.738666724318538 -5.9615201241752915 24.99998646600137 0.9462369361568352 1.0424581056180904 0.11362703810372443 0.11742264816443887 364.2753341867655 236664.52555511444 0.03881043674558797 0.044006828827927495 1.0926469953479802e-06 5.9615201241752915 0.09622116946125514 S(ph)HSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTR ddPTM_KYSE-520_SHP099_60min_R1 1 SHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTR 34 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(0.263)HS(0.263)LS(0.263)RPGPT(0.211)EGDAEGEAEGPVGSTLGSYATLTR 98.883 0.00074639 595860000.0 43499.0 79483.0 51276.0 84966.0 61408.0 60955.0 64655.0 54881.0 82991.0 70124.0 True False 41086.023756893315 75664.51737358462 54581.33300450079 93041.14309404063 66240.46023627472 60574.55723489078 71190.95837199205 54690.63062032172 67921.92643285973 69502.75591564651 0.5911423686099331 1.0886549227690547 0.785311780596795 1.3386684005302174 0.9530623550621339 0.8715418034416991 1.0242897196536271 0.7868843458049082 0.9772551539581339 1.0 16.08478256410514 -4.250764464121717 24.490847831284245 0.9761488695656295 0.5911420772259727 0.37149383645529666 0.1518819155642632 1282.2477426136834 2941713.3098032153 0.03697430793854968 0.5130138434282953 5.613523381051093e-05 4.250764464121717 -0.38500679233965684 S(ph)HSPMS(ph)NR ddPTM_KYSE-520_SHP099_60min_R1 1 SHSPMSNR 8 0 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 2 S(0.994)HS(0.398)PMS(0.608)NR 103.69 0.0022 498900000.0 680680.0 753130.0 650160.0 852200.0 718310.0 795450.0 739860.0 863400.0 865730.0 629400.0 True False 642921.32349806 716948.5043288234 692070.3538927808 933192.8317767269 774836.9103751713 790485.3014928043 814652.2691377632 860405.0669190743 708535.2552773156 623824.0056657899 1.0306133102586972 1.1492800819097115 1.1094000032174995 1.4959232464623675 1.242076135797643 1.2671607605884634 1.305900801730622 1.379243278720555 1.1357935072106047 1.0 19.25077954524541 -5.049967966143763 24.999005341835396 1.2799230305564173 1.0997944975547782 0.24743900989502965 0.12851295452823955 420.30243063290243 210276.98591412776 0.03270419376184787 0.05664661838093144 8.913166798333992e-06 5.049967966143763 -0.1801285330016391 S(ph)HSQASLAGPGPVDPSNR ddPTM_KYSE-520_SHP099_60min_R1 1 SHSQASLAGPGPVDPSNR 18 0 Q9P2M7-2;Q9P2M7;A6PVU7;A2A3M4 Q9P2M7-2 CGN Cingulin 1 S(0.424)HS(0.424)QAS(0.153)LAGPGPVDPSNR 95.666 0.00066927 795510000.0 267840.0 361750.0 262390.0 400530.0 264470.0 253190.0 229980.0 222290.0 280190.0 289540.0 True False 252982.38127419702 344370.98700217996 279304.0792388439 438596.2507762643 285282.28437154077 251609.74729393804 253228.6227885039 221518.92787287576 229314.5590151095 286974.9008587114 0.8815488062447309 1.2000038538970585 0.9732700609115493 1.5283435919443067 0.9941018657655919 0.8767656911494676 0.8824068656553973 0.7719104604968151 0.7990753140045851 1.0 18.130565037156163 -5.996813248506564 24.999797676952806 0.8619810707877597 1.1528261390824885 0.38209694108609693 0.1675785614839082 98.6173336975115 773631.3040922533 0.05145147101374336 0.05804701738638943 1.0073647538609885e-06 5.996813248506564 0.2908450682947289 S(ph)HSVPENMVEPPLSGR ddPTM_KYSE-520_SHP099_60min_R1 2 SHSVPENMVEPPLSGR 16 0 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(0.553)HS(0.447)VPENMVEPPLSGR;S(0.546)HS(0.454)VPENMVEPPLSGR 117.38 0.00011177 1325110000.0 902250.0 881040.0 773440.0 927680.0 910890.0 1018620.0 1027310.0 1301670.0 1333860.0 1109100.0 True False 852200.3939092157 838713.5159319981 823297.179947754 1015846.4282828376 982571.8607448587 1012262.4147420954 1131160.5203794166 1297154.8105820613 1091664.647874279 1099274.2368667424 0.775239121712012 0.7629702287234352 0.7489461249400288 0.9241064642598205 0.8938368860035144 0.9208461190060667 1.029006668621253 1.18001019861917 0.9930776245478535 1.0 20.068119910855387 -6.00222293702904 0.7923255759402931 1.0700321498719447 0.7524142024262855 0.7670520094317147 0.06232035443530398 0.30180108123904154 0.4204142684777251 0.03905210722574318 0.04989746832912878 9.948945755425016e-07 6.00222293702904 -0.3176179474456592 S(ph)HTEEDCTEELFDFLHAR ddPTM_KYSE-520_SHP099_60min_R1 2 SHTEEDCTEELFDFLHAR 18 0 P07919 P07919 UQCRH Cytochrome b-c1 complex subunit 6, mitochondrial 1 S(0.333)HT(0.333)EEDCT(0.333)EELFDFLHAR;S(0.978)HT(0.022)EEDCTEELFDFLHAR 220.36 3.609800000000001e-18 212577000.0 20218.0 21968.8 22342.6 28371.3 20876.4 21971.4 20917.7 32691.0 30787.0 25087.0 True False 19096.467236416214 20913.38587215891 23782.83974542397 31067.699821857612 22519.25390953239 21834.268342722982 23032.265253078913 32577.60255113676 25196.856877112597 24864.748697390653 0.7680136835012625 0.8410857526323439 0.9564882410381964 1.249467678115641 0.9056698776085196 0.8781214163252052 0.9263019519475761 1.3101923107131788 1.0133565870205958 1.0 14.601814229758679 -4.799271458415242 3.1986924008947026 1.039725914705768 0.7912642420910511 0.3273339397964685 0.13388785095843767 0.29070141644564096 6.002221191538489 0.037953537353811635 0.1025489098164599 1.587554128016043e-05 4.799271458415242 -0.24846167261471697 S(ph)HTGDTPFQCWLCSAK ddPTM_KYSE-520_SHP099_60min_R1 1 SHTGDTPFQCWLCSAK 16 0 Q9NTW7-2;Q9NTW7 Q9NTW7-2 ZFP64 Zinc finger protein 64 homolog, isoforms 3 and 4 1 S(0.363)HT(0.319)GDT(0.319)PFQCWLCSAK 75.383 0.009459200000000001 108330000.0 130690.0 134280.0 133490.0 131410.0 133640.0 97119.0 120120.0 132740.0 139340.0 140830.0 True False 123440.36517594407 127828.9872416107 142094.97899155194 143899.166890143 144156.70769241377 96512.8442965362 132262.9018582273 132279.5559217488 114039.36847555358 139582.3557640821 0.8843550784067526 0.9157961731041665 1.018001008893392 1.0309266246613364 1.0327717060175077 0.6914401449110037 0.9475617540212179 0.9476810675507134 0.8170041825938192 1.0 17.090757060250446 S(ph)HTSEGAHLDITPNSGAAGNSAGPK ddPTM_KYSE-520_SHP099_60min_R1 2 SHTSEGAHLDITPNSGAAGNSAGPK 25 0 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 1 S(0.333)HT(0.333)S(0.333)EGAHLDITPNSGAAGNSAGPK;S(0.314)HT(0.314)S(0.314)EGAHLDIT(0.049)PNS(0.009)GAAGNSAGPK 143.98 2.1198e-06 2494400000.0 1665290.0 280920.0 421470.0 464380.0 660200.0 293110.0 454230.0 129835.0 1430520.0 406790.0 True False 1572913.0440266884 267424.1815304832 448638.63057584345 508514.5355790613 712153.9839758422 291280.5917663659 500148.00125759735 129384.63268871687 1170773.628474588 403186.15707783133 3.9012079567083258 0.6632771905382144 1.1127332193829214 1.2612400665355614 1.7663155628588894 0.7224469061077832 1.240489020958744 0.32090544384374875 2.9038041309751144 1.0 18.621086580888722 -4.254426848304402 24.939024502090085 1.1999301418442188 3.901209252840121 0.5859033600252406 0.6756944535772802 535.1290121187451 1903058.2917181603 0.15670941898470656 1.5235573793878356 5.5663838542089144e-05 4.254426848304402 2.7012791109959022 S(ph)IDPALSMLIK ddPTM_KYSE-520_SHP099_60min_R1 6 SIDPALSMLIK 11 0 Q9H501 Q9H501 ESF1 ESF1 homolog 1 S(1)IDPALSMLIK;S(1)IDPALSMLIK;S(1)IDPALSMLIK;S(1)IDPALSMLIK;S(1)IDPALSMLIK;S(1)IDPALSMLIK 172.11 1.0987999999999999e-05 1207183000.0 2273910.0 2287760.0 2195690.0 1850270.0 1959550.0 2099390.0 1853240.0 2017500.0 2544700.0 2211350.0 True False 2147771.679372797 2177852.5756022283 2337227.6906282133 2026119.1044960404 2113755.4366856455 2086286.9282808213 2040583.5850794304 2010501.7633880377 2082646.626666722 2191759.159404267 0.979930513878438 0.9936550584299515 1.0663706733469225 0.9244259780106275 0.9644104497595332 0.951877818933302 0.931025462502948 0.9173004957052415 0.950216914906288 1.0 21.063657846353163 -5.281428004590113 24.94835571083543 0.9450993979640335 1.011352387996796 0.4876359086888411 0.030306630251444838 614.0826257826167 766452.2088202907 0.008404888870252595 0.012485460903040611 5.230846736483979e-06 5.281428004590113 0.06625299003276253 S(ph)IDPDSIQSALLASGLGSK ddPTM_KYSE-520_SHP099_60min_R1 4 SIDPDSIQSALLASGLGSK 19 0 A3KN83-3;A3KN83-2;A3KN83 A3KN83-3 SBNO1 Protein strawberry notch homolog 1 1 S(0.999)IDPDSIQSALLASGLGSK;S(1)IDPDSIQSALLASGLGSK;S(1)IDPDSIQSALLASGLGSK;S(0.999)IDPDS(0.001)IQSALLASGLGSK 218.72 1.062e-18 813663000.0 525549.0 530600.0 479934.0 426245.0 440471.0 560135.0 467520.0 507739.0 610832.0 526347.0 True False 496395.74931404286 505109.1795531631 510871.31356155087 466755.19664476765 475133.5617628351 556638.9896934722 514781.4841554982 505977.771916173 499920.3066216407 521683.9750717699 0.9515257762053203 0.9682282831932368 0.9792735410192895 0.8947087105379353 0.9107689414793109 1.0670041946695668 0.9867688270176939 0.9698932612345699 0.958281891930579 1.0 18.99281659221963 -6.222622830393866 24.99902593456315 0.9939067609527784 0.9419847984658639 0.3770516896762345 0.035576340847655964 689.8855187270748 444307.33776788716 0.012596345977116697 0.012596222909489798 5.989315203894397e-07 6.222622830393866 -0.0519219624869145 S(ph)IDQDYER ddPTM_KYSE-520_SHP099_60min_R1 4 SIDQDYER 8 0 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(1)IDQDYER;S(1)IDQDYER;S(1)IDQDYER;S(1)IDQDYER 172.21 0.00011191 3470250000.0 4083020.0 3845570.0 3663470.0 3463090.0 3849240.0 3574890.0 3572550.0 3550070.0 4318050.0 3540350.0 True False 3856526.741301421 3660823.0448817504 3899623.1379592447 3792221.0323840277 4152153.2888203124 3552577.7854718817 3933698.218728024 3537755.6357625634 3534000.9691823157 3508985.2533506225 1.0990433025100181 1.0432711398220162 1.111325028862864 1.0807172896389212 1.1832917464829893 1.0124231163638076 1.1210358364920048 1.0081990605074413 1.0071290455859871 1.0 21.742622454093997 -7.275763737378395 23.531277781367 1.0057480033754167 1.091705794070091 0.46734506654054686 0.042988780989000386 335.8976290661099 551788.5277549258 0.02243515970211869 0.010871575291108916 5.2995166703085964e-08 7.275763737378395 0.08595779069467424 S(ph)IEALLEAGQAR ddPTM_KYSE-520_SHP099_60min_R1 2 SIEALLEAGQAR 12 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 S(1)IEALLEAGQAR;S(1)IEALLEAGQAR 164.92 3.0527e-06 56009000.0 42426.0 42675.0 36408.0 35893.0 40746.0 32965.0 38259.0 41746.0 54865.0 39522.0 True False 40072.54520586578 40624.82894351908 38754.917934859644 39304.25992837604 43952.47838697317 32759.25320725414 42126.593091857474 41601.19286958964 44902.89903409828 39171.86582765075 1.0229930170336503 1.0370920068566842 0.9893559348276745 1.0033798262586675 1.1220419925963259 0.8362954512146303 1.0754298321455251 1.0620171388472406 1.146304830912652 1.0 15.257530227679561 -6.9273112700081185 24.99999999993675 1.076285548169102 1.004044714402481 0.1714507319813917 0.07392994075118146 71.82049510073453 24699.645420955458 0.029926634308049385 0.020176527772863474 1.1821939432500701e-07 6.9273112700081185 -0.07224083376662094 S(ph)IEDLHR ddPTM_KYSE-520_SHP099_60min_R1 4 SIEDLHR 7 0 Q96PY5-3;Q96PY5 Q96PY5-3 FMNL2 Formin-like protein 2 1 S(1)IEDLHR;S(1)IEDLHR;S(1)IEDLHR;S(1)IEDLHR 191.85 5.4291000000000006e-05 1892690000.0 1091150.0 998890.0 878810.0 1042830.0 1074710.0 1027780.0 991330.0 1058850.0 1397670.0 970980.0 True False 1030621.7343464026 950901.8250355432 935459.4987457154 1141940.2496617287 1159283.5627365613 1021365.2437843671 1091543.3108484554 1055177.0964874474 1143888.3603934764 962377.8726110089 1.070911711166262 0.9880753206177421 0.9720293092439233 1.1865819883862796 1.2046033016026556 1.0612933576842543 1.1342148878454679 1.0964270132527743 1.188606256386605 1.0 19.8762439462927 -5.255419046169662 24.989460894378006 1.1296549577301398 1.008112430852646 0.4011195859011212 0.06370952513005872 454.39416938637044 1886113.4077219183 0.016996834605178503 0.028499289933209233 5.553681298032939e-06 5.255419046169662 -0.1215425268774939 S(ph)IEEREEEYQR ddPTM_KYSE-520_SHP099_60min_R1 2 SIEEREEEYQR 11 1 Q15032-2;Q15032-4;Q15032;Q15032-3;H7C2F9;Q9UBL0;B5MCU0;H7C0E9 Q15032-2;B5MCU0 R3HDM1;ARPP21;R3HDM2 R3H domain-containing protein 1;cAMP-regulated phosphoprotein 21 1 S(1)IEEREEEYQR;S(1)IEEREEEYQR 143.38 4.507600000000001e-05 264240000.0 182158.0 176925.0 180719.0 141718.0 164881.0 136187.0 118935.0 147513.0 211284.0 146588.0 True False 172053.33261702955 168425.25743016085 192368.43590062376 155186.83611092964 177856.196655439 135337.00641699738 130958.11049374191 147001.3118327929 172920.15163620532 145289.34436373826 1.184211638991821 1.159240260651881 1.324036781520749 1.0681226265459123 1.2241516914700104 0.9314998770878561 0.9013607368609395 1.0117831591611335 1.1901777958560549 1.0 17.148569372883777 -6.254737265350552 24.95365165007778 1.0011005366307115 1.1905938203350563 0.4992880849850819 0.09252780979341453 460.44497241455934 1714352.814271874 0.03169325678417076 0.030986735206894423 5.562406637978135e-07 6.254737265350552 0.18949328370434482 S(ph)IEVENDFLPVEK ddPTM_KYSE-520_SHP099_60min_R1 14 SIEVENDFLPVEK 13 0 Q5JPT1;Q5VSN0;Q5JPT2;Q96B97-2;Q96B97 Q5JPT1 SH3KBP1 SH3 domain-containing kinase-binding protein 1 1 S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK;S(1)IEVENDFLPVEK 350.57 8.479699999999999e-52 9230765000.0 11232970.0 10526330.0 10109410.0 9202490.0 10329450.0 10479540.0 9384670.0 10378080.0 12540770.0 10201750.0 True False 10609854.76172946 10020629.306456551 10761078.744227897 10077091.882770495 11142318.948469054 10414133.303672 10333364.029152924 10342080.862742078 10263682.295085171 10111370.431841403 1.0492993836244289 0.991025833145317 1.0642552180998648 0.9966099007743834 1.101959326243367 1.0299428127840293 1.0219548476448304 1.0228169299558199 1.0150634243172545 1.0 23.26947520855756 -7.5829697327437735 1.144006632622753 1.0026392721328854 1.0376097294056232 0.14659698655067954 0.030065817779132305 0.9600273796578961 2.346137002515327 0.027069264245600553 0.009297309081429997 2.6123434099293637e-08 7.5829697327437735 0.03497045727273784 S(ph)IGLAYEGK ddPTM_KYSE-520_SHP099_60min_R1 1 SIGLAYEGK 9 0 P19883-2;P19883;H0YAF9;H0YA75 P19883-2 FST Follistatin 1 S(1)IGLAYEGK 70.1 0.039931 0.0 105050.0 117060.0 96369.0 132780.0 111550.0 94253.0 97595.0 126640.0 132100.0 113780.0 True False 99222.66708801672 111436.26188935789 102581.09993585166 145399.37127823717 120328.35036732099 93664.73206562489 107460.855035412 126200.71539799824 108113.9699700061 112771.99771950042 0.8798519942407586 0.9881554299191815 0.9096327280731805 1.2893215888565825 1.0670055758577197 0.8305672858487323 0.9529037102162639 1.119078476484023 0.9586951739466361 1.0 16.783049352754386 S(ph)IGSAVDQGNESIVAK ddPTM_KYSE-520_SHP099_60min_R1 9 SIGSAVDQGNESIVAK 16 0 Q9H0H5;F8VRD2;F8W1E5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 S(0.999)IGS(0.001)AVDQGNESIVAK;S(1)IGSAVDQGNESIVAK;S(1)IGSAVDQGNESIVAK;S(0.999)IGS(0.001)AVDQGNESIVAK;S(1)IGSAVDQGNESIVAK;S(1)IGSAVDQGNESIVAK;S(1)IGSAVDQGNESIVAK;S(1)IGSAVDQGNESIVAK;S(1)IGSAVDQGNESIVAK 362.84 1.0057999999999998e-71 4923510000.0 4759460.0 5119700.0 4449950.0 4186260.0 4200680.0 5486260.0 4634230.0 6143600.0 6900760.0 5768260.0 True False 4495443.266051718 4873741.927173633 4736800.897171745 4584120.891755035 4531249.617400244 5452018.216315182 5102703.194126318 6122289.285527014 5647755.938003173 5717157.704038373 0.7863073748825077 0.8524763841534432 0.828523742457875 0.8018181636859508 0.7925703386141595 0.9536238981940437 0.8925244777701289 1.070862411439599 0.9878607920879675 1.0 22.44686665593939 -6.684146745176916 1.3381834762494502 1.017392103830756 0.8145526096871899 0.7928255854983917 0.04346931725747647 0.18316225057955748 0.6668410718938538 0.02490487513982795 0.015543754294896822 2.0694419801512177e-07 6.684146745176916 -0.20283949414356617 S(ph)IGSIALRKAEDIDFK ddPTM_KYSE-520_SHP099_60min_R1 1 SIGSIALRKAEDIDFK 16 2 B4DYY6;Q75T13-3;Q75T13 B4DYY6 PGAP1 GPI inositol-deacylase 1 S(0.5)IGS(0.5)IALRKAEDIDFK 73.928 0.010003 390500000.0 875150.0 773000.0 764400.0 851320.0 830500.0 798140.0 717080.0 706080.0 972000.0 745420.0 True False 826603.6849317268 735863.9197033454 813674.4470832425 932229.1968413086 895855.625101389 793158.5122049999 789569.4444263874 703630.7732803109 795509.302126009 738816.1587279838 1.1188218816909559 0.9960040952139957 1.1013219425034528 1.2617877747101838 1.2125555383680011 1.0735532822814502 1.0686954191497182 0.9523759936325007 1.0767351156688743 1.0 19.49485589444124 -6.7562942092010845 2.447238166578914 1.013160674778243 1.1341687248707173 0.34956574860822265 0.07308473304420421 0.3696514841638042 4.527153660973013 0.0381352712583782 0.025408074241167613 1.7526927523777432e-07 6.7562942092010845 0.1210080500924744 S(ph)IHEVDISNLEAALR ddPTM_KYSE-520_SHP099_60min_R1 14 SIHEVDISNLEAALR 15 0 A0A1B0GUN5;Q5VTI5;Q9Y2H5 A0A1B0GUN5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR;S(1)IHEVDISNLEAALR 330.54 2.5435999999999997e-54 5565600000.0 1639839.0 1657093.0 1597758.0 1674477.0 1579889.0 1520467.0 1498692.0 1586394.0 1942171.0 1590636.0 True False 1548873.8617319968 1577483.764932698 1700752.0371831865 1833618.790630131 1704217.2759612408 1510977.2014644041 1650194.4131844027 1580891.169481144 1589521.70454668 1576544.202536082 0.9824487377140624 1.0005959632435961 1.0787848729184375 1.1630620871146589 1.0809828695064685 0.9584109338855171 1.0467162357578332 1.0027572756527026 1.008231613163603 1.0 20.58833418963759 -6.240554290098469 24.79111941994596 1.006113849910268 1.0644481416588576 0.24939929593056542 0.04998190424946267 1200.7526575257655 1425325.0215774027 0.0183751579695571 0.018358173926995916 5.747059717570827e-07 6.240554290098469 0.05833429174858962 S(ph)IKNEFLT(ph)QGEALK ddPTM_KYSE-520_SHP099_60min_R1 4 SIKNEFLTQGEALK 14 1 Q8WZ64 Q8WZ64 ARAP2 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 2 S(1)IKNEFLT(1)QGEALK;S(1)IKNEFLT(1)QGEALK;S(1)IKNEFLT(1)QGEALK;S(1)IKNEFLT(1)QGEALK 77.468 0.010919 364105000.0 839610.0 864830.0 859210.0 684564.0 793346.0 838710.0 694655.0 774875.0 1106120.0 778890.0 True False 793035.1595789604 823282.2686637051 914596.0513846071 749624.7567383293 855777.8166787326 833475.2997863219 764877.5065794772 772187.1394821847 905276.4910160716 771989.6405672502 1.0272614008087546 1.0664421196879865 1.1847258089014914 0.9710295544737007 1.1085353633112431 1.0796457050562138 0.9907872675823123 1.0002558310430039 1.172653677516817 1.0 19.558221962341396 S(ph)IKS(ph)DVPVYLK ddPTM_KYSE-520_SHP099_60min_R1 4 SIKSDVPVYLK 11 1 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 2 S(1)IKS(0.995)DVPVY(0.005)LK;S(1)IKS(1)DVPVYLK;S(1)IKS(1)DVPVYLK;S(1)IKS(1)DVPVYLK 134.14 8.1161e-05 199305000.0 1545120.0 1277710.0 1193960.0 1464900.0 1374060.0 1297640.0 1335590.0 1578920.0 1437450.0 1433480.0 True False 1459409.1134796424 1216326.8937181905 1270924.5720035445 1604123.655561756 1482190.7046680485 1289540.9474248828 1470604.4713022788 1573443.0950426995 1176445.3151656715 1420780.4824305642 1.0271883176372154 0.8560976933166974 0.8945256411668483 1.1290439834995074 1.043222878549421 0.9076285628718894 1.0350680414658282 1.1074498238819916 0.8280275029912415 1.0 20.43825223764648 S(ph)IKSDVPVYLK ddPTM_KYSE-520_SHP099_60min_R1 1 SIKSDVPVYLK 11 1 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.617)IKS(0.383)DVPVYLK 63.708999999999996 0.02171 334290000.0 772650.0 708570.0 650200.0 671200.0 635820.0 670470.0 728330.0 686980.0 769030.0 687560.0 True False 729789.5642604106 674529.2336147472 692112.9323567837 734990.6461963613 685855.4166790668 666285.3480317813 801956.7042158071 684597.0267223377 629393.5376686885 681468.7533135861 1.0709068621442561 0.9898168189442347 1.015619467497873 1.078539027097764 1.0064370719041056 0.9777195869832963 1.1768062736792526 1.0045904869350804 0.9235838541507793 1.0 19.378287982570733 -7.52455842810152 24.98507910829237 0.962556970050609 1.0427522860707794 0.25890072616692283 0.05661371484885541 79.4253744682078 1181318.4023533384 0.03725308972042712 0.014307735846434825 2.9884195708673316e-08 7.52455842810152 0.08019531602017038 S(ph)ILAQQS(ph)KLS(ph)KPR ddPTM_KYSE-520_SHP099_60min_R1 2 SILAQQSKLSKPR 13 2 Q5JXC2;Q5JXC2-2 Q5JXC2 MIIP Migration and invasion-inhibitory protein 3 S(1)ILAQQS(1)KLS(1)KPR;S(1)ILAQQS(1)KLS(1)KPR 66.965 0.016186000000000002 1238120000.0 803740.0 626910.0 933910.0 414520.0 843750.0 755090.0 473090.0 543510.0 746450.0 799570.0 True False 759154.9399840322 596792.3025889051 994111.332908833 453915.85617001716 910148.3247192033 750377.2032235858 520914.55411345954 541624.6906661878 610913.4964732098 792486.4318560477 0.9579406150917293 0.7530631170443941 1.254420634786855 0.5727742935698227 1.1484718073817173 0.9468644169290827 0.6573166847708022 0.6834497966074603 0.7708819632942057 1.0 19.596026709548084 -6.743870222414529 24.388485367783762 0.751532936939712 0.937697085175803 0.1327834337607734 0.19700616566749807 313.0673867210622 434581.74346566695 0.07125542950600353 0.055055695815853074 1.8035566062223666e-07 6.743870222414529 0.18616414823609095 S(ph)ILGTPLSK ddPTM_KYSE-520_SHP099_60min_R1 2 SILGTPLSK 9 0 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 S(1)ILGTPLSK;S(1)ILGTPLSK 161.67 0.00013566 755020000.0 1426190.0 1245570.0 1173140.0 1100120.0 1169650.0 1300020.0 1016470.0 1355820.0 1369430.0 1507930.0 True False 1347076.3976607204 1185730.9475613146 1248762.481490366 1204675.0740368601 1261694.8006018552 1291906.0929620648 1119224.707391212 1351116.9768707657 1120776.032521008 1494570.913351788 0.9013131365173633 0.7933587740592009 0.8355324396684788 0.806034068557647 0.8441853038423751 0.8643993278745011 0.748860222952681 0.9040166410308987 0.7498981965382348 1.0 20.511299919945962 -11.324506543598877 2.4431670269675223 2.069847762338075 0.8276229737299345 0.49940964364108464 0.0518077529535545 4385597.572122838 884177.3360012707 25986306.630288303 0.01159381347529122 4.736891709545943e-12 11.324506543598877 -1.2422247886081406 S(ph)INKLDS(ph)PDPFK ddPTM_KYSE-520_SHP099_60min_R1 2 SINKLDSPDPFK 12 1 P42566;B1AUU8;P42566-2 P42566 EPS15 Epidermal growth factor receptor substrate 15 2 S(1)INKLDS(1)PDPFK;S(1)INKLDS(1)PDPFK 118.48 8.9718e-05 644020000.0 1668720.0 1342290.0 1241070.0 1434950.0 1492250.0 1620900.0 1673840.0 1897990.0 2056100.0 1842430.0 True False 1576152.775089153 1277804.373581635 1321071.357982211 1571327.21656655 1609681.5852589407 1610783.361857673 1843048.0823041538 1891406.3156841982 1682764.0700630527 1826107.5035888515 0.8631215697824679 0.699742140629927 0.7234356988216234 0.8604790317538363 0.8814823782802662 0.8820857253431127 1.0092768791990663 1.0357584709372338 0.9215032886924314 1.0 20.800340269109167 -6.039660272232643 1.0255355718880081 0.9936600242789152 0.7585823080543538 0.7209832227365431 0.056443598880372536 0.26881448869782537 0.6057141530017363 0.029190962194985258 0.033095864720174534 9.127245408544965e-07 6.039660272232643 -0.23507771622456142 S(ph)INPPCVPFFGIY(ph)LT(ph)NILKT(ph)EEGNNDFLK ddPTM_KYSE-520_SHP099_60min_R1 3 SINPPCVPFFGIYLTNILKTEEGNNDFLK 29 1 Q07890-2;Q07890 Q07890-2 SOS2 Son of sevenless homolog 2 4 S(1)INPPCVPFFGIY(1)LT(1)NILKT(1)EEGNNDFLK;S(1)INPPCVPFFGIY(1)LT(1)NILKT(1)EEGNNDFLK;S(1)INPPCVPFFGIY(1)LT(1)NILKT(1)EEGNNDFLK 55.358000000000004 0.027030000000000002 902434000.0 305426.0 275474.0 245861.0 204637.0 237646.0 247066.0 215030.0 242994.0 319182.0 247474.0 True False 288483.41092836397 262239.81554509624 261709.59345150884 224085.63895364272 256347.3881792231 245523.9694495208 236767.33089056434 242151.11052922608 261226.59472344004 245281.5728918583 1.1761316087758165 1.0691378583939308 1.0669761709612546 0.9135852983641759 1.0451147436674486 1.0009882379454953 0.9652878856698796 0.9872372705143554 1.0650070106922045 1.0 17.904079327997575 -4.388776615752204 1.401153540604474 0.9981521115437231 1.2186900749019607 0.6183863015857192 0.04235374005801104 0.6262916347276981 1.33798268142473 0.012138301137746353 0.18246685705720314 4.085294640214263e-05 4.388776615752204 0.2205379633582376 S(ph)INYSK ddPTM_KYSE-520_SHP099_60min_R1 5 SINYSK 6 0 A0A087WSW7;F6XU50;A0A0B4J1V9;Q9NRZ9-6;Q9NRZ9-5;Q9NRZ9-4;Q9NRZ9-3;Q9NRZ9-2;Q9NRZ9 A0A087WSW7 HELLS Lymphoid-specific helicase 1 S(0.984)INY(0.002)S(0.014)K;S(0.996)INYS(0.003)K;S(0.996)INYS(0.003)K;S(0.998)INY(0.001)SK;S(1)INYSK 101.9 0.011568 2831820000.0 3799020.0 3770090.0 3489770.0 3792160.0 3914050.0 3771320.0 3966150.0 4145650.0 4847810.0 4382770.0 True False 3588280.787441384 3588969.21737954 3714726.1580294245 4152565.7462455193 4222063.467101855 3747781.7929798737 4367087.147893836 4131269.7077519796 3967569.9073451567 4343942.06754346 0.826042505090449 0.8262009855506972 0.8551509436059622 0.9559440898791346 0.971942857766856 0.8627605374809428 1.005328128227885 0.9510416215307059 0.9133570028453106 1.0 22.050573432267306 -5.165989853493031 3.6364288861557776 0.9490450358408397 0.8287474828095671 0.6520536985654102 0.038986228479077886 0.147784682634719 3.6297981509211112 0.010694863961013063 0.019677630317183517 6.823546359403351e-06 5.165989853493031 -0.12029755303127254 S(ph)IPLSIK ddPTM_KYSE-520_SHP099_60min_R1 3 SIPLSIK 7 0 Q9C0C9;K7ES11 Q9C0C9 UBE2O E2/E3 hybrid ubiquitin-protein ligase UBE2O 1 S(0.999)IPLS(0.001)IK;S(1)IPLSIK;S(1)IPLSIK 126.82 0.0022113000000000002 1084200000.0 2968210.0 3283020.0 3139250.0 2830340.0 3126860.0 3252470.0 3307250.0 3228570.0 3399490.0 3592080.0 True False 2803557.4743200582 3125298.791286513 3341611.077977593 3099334.662627247 3372926.0926002795 3232170.1282875133 3641579.1056495346 3217370.844223904 2782228.3101690807 3560256.965795949 0.7874593045542376 0.8778295559314511 0.938587048654373 0.8705367877664819 0.9473827661892408 0.9078474276827693 1.0228416489694037 0.9036906254615282 0.7814683987415699 1.0 21.763549942510362 -4.324233360736773 2.4254150827609813 0.9204611886294751 0.7666227301978141 0.2917273115146364 0.06344513152004791 0.6015979113956381 4.8216995604631006 0.016582928502477157 0.18193640456000146 4.739872278643978e-05 4.324233360736773 -0.153838458431661 S(ph)IPMPASR ddPTM_KYSE-520_SHP099_60min_R1 4 SIPMPASR 8 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(1)IPMPASR;S(1)IPMPASR;S(1)IPMPASR;S(1)IPMPASR 103.88 0.0020594999999999997 2097520000.0 1616450.0 1402410.0 1497170.0 1372970.0 1350900.0 1561610.0 1477170.0 1644810.0 1722090.0 1477040.0 True False 1526782.2961868148 1335036.1185396754 1593679.973756697 1503456.6560015157 1457208.1444304236 1551863.4127401845 1626496.7593899223 1639104.538011539 1409401.8663561533 1463954.5747197298 1.0429164419115349 0.9119382128337311 1.0886129947452794 1.026983133195474 0.9953916396001579 1.060048883714363 1.1110295274710356 1.1196416653333259 0.9627360648304129 1.0 20.481439358025835 -6.278047257646553 21.17244681835607 1.0619400200982911 1.012503436221033 0.07278137753562963 0.060625310697235424 236.11587870387766 301007.286809923 0.021145418106650257 0.01873661532096143 5.271724941572095e-07 6.278047257646553 -0.04943658387725813 S(ph)IPNGLHDPSSTYIR ddPTM_KYSE-520_SHP099_60min_R1 3 SIPNGLHDPSSTYIR 15 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(1)IPNGLHDPSSTYIR;S(1)IPNGLHDPSSTYIR;S(1)IPNGLHDPSSTYIR 122.35 7.200300000000001e-05 3898800000.0 959290.0 1059420.0 1018940.0 1269710.0 854650.0 955240.0 912180.0 886710.0 1171210.0 810610.0 True False 906076.271402794 1008523.8729781605 1084622.502761644 1390382.8566477697 921906.092706686 949277.9928317126 1004392.0564188967 883634.2099696707 958547.7878014427 803428.626045036 1.127761996560979 1.2552750055007722 1.3499923547668637 1.7305617594086473 1.147464831126155 1.1815336945418982 1.250132275424545 1.0998291339449222 1.1930714897725234 1.0 19.61581033975033 S(ph)IPQLDLGWPDTIAYR ddPTM_KYSE-520_SHP099_60min_R1 8 SIPQLDLGWPDTIAYR 16 0 A6ND36 A6ND36 FAM83G Protein FAM83G 1 S(1)IPQLDLGWPDTIAYR;S(1)IPQLDLGWPDTIAYR;S(1)IPQLDLGWPDTIAYR;S(1)IPQLDLGWPDTIAYR;S(1)IPQLDLGWPDTIAYR;S(1)IPQLDLGWPDTIAYR;S(1)IPQLDLGWPDTIAYR;S(1)IPQLDLGWPDTIAYR 351.6 2.7970999999999995e-59 12021080000.0 1250055.0 1310880.0 1189988.0 1039164.0 1061749.0 1009200.0 951216.0 1046157.0 1345474.0 1108174.0 True False 1180711.957227137 1247903.357129004 1266696.5305281202 1137925.8341239507 1145302.6057745647 1002901.2084562689 1047374.1962535423 1042528.1255418804 1101169.8382393934 1098356.4405063246 1.0749806835774074 1.136155177961847 1.153265446273701 1.0360260040896971 1.0427421950988867 0.9130926641573182 0.9535831517232417 0.9491710405606505 1.0025614614976646 1.0 20.066914885508467 -5.730297748495518 1.7729471948783584 0.9618798510413079 1.1205936266785528 0.7617311053061974 0.036603301228148394 0.15637815105361055 1.0151100558177297 0.012690930525532839 0.017245553902513762 1.8608109435437742e-06 5.730297748495518 0.15871377563724487 S(ph)IQDLTVTGTEPGQVSSR ddPTM_KYSE-520_SHP099_60min_R1 8 SIQDLTVTGTEPGQVSSR 18 0 O43318-3;O43318;Q9UG54;O43318-4;O43318-2 O43318-3 MAP3K7;DKFZp586F0420 Mitogen-activated protein kinase kinase kinase 7 1 S(0.997)IQDLT(0.003)VTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR;S(0.478)IQDLT(0.471)VT(0.051)GTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR;S(1)IQDLTVTGTEPGQVSSR 337.85 4.3031e-59 26913300000.0 3788010.0 3596000.0 3189220.0 2586342.0 2904910.0 3525150.0 3194480.0 3402170.0 3849450.0 3446350.0 True False 3577881.5340892742 3423242.7622939576 3394802.2241324163 2832147.1660679253 3133509.8903230317 3503148.2312620003 3517409.2135203923 3390368.6663424484 3150486.916737621 3415818.0202197284 1.0474450081679472 1.0021736351381365 0.9938475071087188 0.8291270639428685 0.9173527019807288 1.025566412064497 1.0297413950916885 0.9925495580482818 0.9223228222605843 1.0 21.7037996858751 -8.729292895370332 15.47292530489626 0.999999999999696 0.972668723276805 0.01580244049408197 0.06289678557332007 0.0 0.0 0.0661640239764822 0.016047132910055037 1.8651213979051075e-09 8.729292895370332 -0.02733127672289104 S(ph)IQEDTKK ddPTM_KYSE-520_SHP099_60min_R1 5 SIQEDTKK 8 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7BZ98 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(1)IQEDTKK;S(1)IQEDTKK;S(1)IQEDTKK;S(1)IQEDTKK;S(1)IQEDTKK 132.56 0.00050419 4876260000.0 8828300.0 7083410.0 6580000.0 7491410.0 8118730.0 8123100.0 8593400.0 8608900.0 9861400.0 9113400.0 True False 8338576.600220258 6743112.351184823 7004157.328372247 8203391.354025457 8757627.861745212 8072400.719789046 9462104.735501906 8579037.735232359 8070818.345664016 9032662.36611791 0.9231582297926677 0.7465254515079259 0.7754255660706733 0.908191961740638 0.969551114253493 0.8936900763687496 1.0475432770513888 0.9497795209763263 0.8935148927893252 1.0 23.10671985229911 -5.444041534857653 3.9447641560046196 0.9568553251758376 0.8091625469586616 0.5293646417252141 0.0604678302819017 0.17561869116422443 5.121245793684659 0.0174756252562771 0.02612143585584119 3.5971493125802527e-06 5.444041534857653 -0.14769277821717597 S(ph)IQEELQQLR ddPTM_KYSE-520_SHP099_60min_R1 1 SIQEELQQLR 10 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 S(1)IQEELQQLR 113.25 0.00063234 65465000.0 11000.0 12946.0 17468.0 13882.0 15081.0 10574.0 19796.0 18982.0 16845.0 22516.0 True False 10389.808072043637 12324.054727657827 18594.0152297882 15201.341106224505 16267.788900847749 10508.003743773857 21797.172870341885 18916.1558724321 13786.372627893645 22316.525757182928 0.4655656612992062 0.5522389489184325 0.8331948902845427 0.6811696978115741 0.7289570553163591 0.4708619907107041 0.9767278790394208 0.8476299616818104 0.617765183429427 1.0 14.44582482504008 -4.759988126282755 0.08683818554292198 1.2412281082933951 1.0084247417734675e-10 0.37345615702700086 0.14602561400522976 76.28370759241292 1.265426795150911 5.096802653517232 14.351978356352658 1.737848341298125e-05 4.759988126282755 -1.2412281081925527 S(ph)IQFVDWCPTGFK ddPTM_KYSE-520_SHP099_60min_R1 5 SIQFVDWCPTGFK 13 0 P68363;P68366-2;P68366;P68363-2 P68363 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain 1 S(1)IQFVDWCPTGFK;S(1)IQFVDWCPTGFK;S(1)IQFVDWCPTGFK;S(1)IQFVDWCPTGFK;S(1)IQFVDWCPTGFK 236.43 9.125e-16 7103160000.0 7252320.0 6523200.0 6604070.0 5794887.0 5871254.0 5825342.0 5873493.0 5763157.0 7116280.0 5967310.0 True False 6850019.352458511 6209815.680477187 7029778.919085609 6345631.318183701 6333288.286934414 5788983.879777104 6467242.992207662 5743165.953497955 5824142.938820247 5914444.275896929 1.1581847816834323 1.0499406860225198 1.1885780964636004 1.0729040670894445 1.0708171370798767 0.9787874582518069 1.0934658761709106 0.9710406735765551 0.984732067314475 1.0 22.495811187919266 -5.875026744325071 1.6597105191074433 1.0078578343181244 1.1239903047007267 0.5555956837821151 0.04777148714003766 0.28577485475122844 1.6233531824817817 0.01732546687735735 0.02117128254833612 1.3334393149961447e-06 5.875026744325071 0.11613247038260233 S(ph)IRDTPAK ddPTM_KYSE-520_SHP099_60min_R1 1 SIRDTPAK 8 1 P06748;P06748-3 P06748 NPM1 Nucleophosmin 1 S(0.763)IRDT(0.237)PAK 105.13 0.0028822 23954000000.0 27363000.0 26635000.0 23556000.0 18408000.0 19329000.0 21289000.0 21065000.0 21729000.0 27014000.0 25016000.0 True False 25845119.84321186 25355414.620049942 25074457.450932603 20157490.785432987 20850082.33303403 21156127.45424643 23194455.774588395 21653627.17058672 22108938.567522656 24794377.702153508 1.0423782421031318 1.0226275861663472 1.0112960991456854 0.8129863563255396 0.84091976751742 0.853263094899491 0.9354723902820052 0.8733281161844204 0.8916916098121064 1.0 24.563509680759392 -5.159409734480791 6.332614576584835 0.8804886329685794 1.0280405667570756 0.6196140217596703 0.0496926833215183 0.14820898101950625 7.800800783249937 0.01333864721483946 0.023380576640153153 6.927719029852052e-06 5.159409734480791 0.14755193378849618 S(ph)IS(ph)ESSR ddPTM_KYSE-520_SHP099_60min_R1 2 SISESSR 7 0 Q9H307 Q9H307 PNN Pinin 2 S(1)IS(0.987)ES(0.013)SR;S(1)IS(0.999)ES(0.001)SR 114.86 0.0052768 712560000.0 2000770.0 1850250.0 2179850.0 1761910.0 1900820.0 2167320.0 2046660.0 1997690.0 2466600.0 1864680.0 True False 1889783.2996638895 1761361.2127181287 2320366.618883318 1929361.3966624404 2050403.7198136344 2153792.951953467 2253556.3662767205 1990760.4796543499 2018727.61792594 1848160.3858990879 1.0225212671380537 0.9530348264992524 1.2555006787219456 1.0439361277207821 1.1094295362337614 1.1653712353030963 1.219351082011433 1.0771578564518849 1.0922902759566915 1.0 20.817658530569958 -4.731585033085592 24.9999852409102 1.1251556511124317 0.9877779207725851 0.3337916076396521 0.07468997657800121 218.80664345558014 183225.3035735343 0.018291920832940095 0.04838243973476995 1.8553035130192765e-05 4.731585033085592 -0.13737773033984657 S(ph)IS(ph)RPRS(ph)S(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SISRPRSSR 9 2 Q16629;C9JAB2;Q16629-4;H7BZZ6 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 4 S(1)IS(1)RPRS(1)S(1)R 62.044 0.023224 246980000.0 656280.0 542370.0 482640.0 501930.0 515320.0 565880.0 504210.0 561150.0 556980.0 501010.0 True False 619874.8401382543 516313.73108603264 513751.7466513041 549633.2762892431 555872.7522302812 562348.1330174725 555180.4674153915 559203.5016233949 455846.47232319403 496571.4411798813 1.2483094852684185 1.0397571996070547 1.0345978524874517 1.1068563971042797 1.1194215094398035 1.1324616890598906 1.1180273801011429 1.1261290022936001 0.9179876942582069 1.0 18.921641766050374 -7.755476774589907 24.98286148815198 0.9589938265371861 1.1109267986695637 0.535201580824201 0.05827714256151887 99.11146658408401 415283.1034536528 0.04131838484581484 0.014696077681554133 1.7559947996263062e-08 7.755476774589907 0.15193297213237755 S(ph)ISADDDLQESSR ddPTM_KYSE-520_SHP099_60min_R1 1 SISADDDLQESSR 13 0 P18615;P18615-3;A2ABK4;A0A0A0MT02;P18615-4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 NELFE Negative elongation factor E 1 S(0.5)IS(0.5)ADDDLQESSR 93.23700000000001 0.004545399999999999 1116300000.0 599040.0 590990.0 682410.0 551870.0 584860.0 719910.0 691440.0 813840.0 909860.0 602790.0 True False 565810.0570433664 562597.9533059241 726399.2404946059 604319.5588742343 630885.1546018047 715416.7746529445 761337.5030041018 811016.978991684 744652.359704086 597449.749563523 0.9470420858937986 0.9416657278991907 1.2158331994034461 1.0114985558462954 1.0559635434824577 1.197450957466472 1.274312197068138 1.3574647568003606 1.246384922327115 1.0 19.188457850117345 -6.318884333396505 2.9716671908798937 1.2484108727229313 1.0352577080983292 0.3884459489579972 0.11145395954181984 0.2565189869250422 4.493569571548213 0.04177016699896112 0.037333326446793116 4.798612341159606e-07 6.318884333396505 -0.2131531646246021 S(ph)ISEIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE ddPTM_KYSE-520_SHP099_60min_R1 2 SISEIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE 35 1 P49902-2;P49902 P49902-2 NT5C2 Cytosolic purine 5-nucleotidase 1 S(0.5)IS(0.5)EIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE;S(0.5)IS(0.5)EIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE 179.07 5.7119e-11 480510000.0 59147.0 63218.0 69308.0 57244.0 68326.0 60469.0 72975.0 74481.0 93259.0 75561.0 True False 55865.9980033787 60180.91238784743 73775.70457672093 62684.45254896381 73702.8674782391 60091.59054116338 80352.02516736706 74222.64279499602 76325.51646807567 74891.58832556839 0.7459582478144045 0.8035737221412533 0.9851000122470832 0.8370025786669423 0.9841274450988851 0.802381040176815 1.0729112169187958 0.9910678148837713 1.0191467182705982 1.0 16.1925160666917 -2.35165102136702 0.29044036877181467 1.019092250086213 5.80294404560329e-16 0.5183727833159655 0.07519861837908697 19.915106984271194 0.5664716419793986 0.08072752370297587 8.91790522302768 0.0044498869584420914 2.35165102136702 -1.0190922500862123 S(ph)ISESSR ddPTM_KYSE-520_SHP099_60min_R1 2 SISESSR 7 0 Q9H307 Q9H307 PNN Pinin 1 S(0.998)IS(0.002)ESSR;S(1)ISESSR 165.26 0.00081694 169139000.0 113341.0 89592.0 89563.0 81034.0 92001.0 100158.0 93163.0 85817.0 117846.0 87996.0 True False 107053.74879031797 85287.86583966628 95336.37428586677 88735.44699623958 99240.95528591568 99532.87677027639 102580.82522326038 85519.32085683847 96448.13705590712 87216.42389985204 1.2274494183944589 0.9778876732850195 1.0931011617185613 1.0174167092442563 1.1378700346608002 1.141217127688782 1.176164082822873 0.9805414741039795 1.1058483338717897 1.0 16.412312216933902 -7.272210665583765 24.942712036987103 1.0323961868885307 1.103108129631042 0.19521192797343134 0.07464287214635477 1394.1312092295032 3228322.7916577435 0.03969012656908412 0.01937073227974817 5.3430511823982736e-08 7.272210665583765 0.07071194274251136 S(ph)ISGTSTSEKPNSMDTANTSPFK ddPTM_KYSE-520_SHP099_60min_R1 13 SISGTSTSEKPNSMDTANTSPFK 23 1 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.976)IS(0.015)GT(0.005)S(0.002)T(0.002)SEKPNSMDTANTSPFK;S(0.839)IS(0.161)GTSTSEKPNSMDTANTSPFK;S(0.983)IS(0.017)GTSTSEKPNSMDTANTSPFK;S(1)ISGTSTSEKPNSMDTANTSPFK;S(0.999)IS(0.001)GTSTSEKPNSMDTANTSPFK;S(1)ISGTSTSEKPNSMDTANTSPFK;S(1)ISGTSTSEKPNSMDTANTSPFK;S(0.999)IS(0.001)GTSTSEKPNSMDTANTSPFK;S(0.943)IS(0.048)GT(0.003)S(0.002)T(0.002)S(0.002)EKPNSMDTANTSPFK;S(0.971)IS(0.016)GT(0.003)S(0.003)T(0.003)S(0.003)EKPNSMDTANTSPFK;S(0.971)IS(0.013)GT(0.004)S(0.004)T(0.004)S(0.004)EKPNSMDTANTSPFK;S(0.926)IS(0.051)GT(0.015)S(0.004)T(0.003)S(0.001)EKPNSMDTANTSPFK;S(0.168)IS(0.168)GT(0.155)S(0.168)T(0.168)S(0.168)EKPNS(0.003)MDTANTSPFK 359.07 1.5592999999999995e-85 34964730000.0 17163580.0 15354760.0 12811900.0 12421900.0 12046830.0 13116690.0 13956140.0 15213210.0 17235490.0 14696970.0 True False 16211482.00265153 14617094.28163535 13637775.573764784 13602473.641219594 12994846.983913502 13034823.872320877 15366962.830000676 15160438.92529991 14105959.487345487 14566766.279869648 1.1129087740670882 1.0034549879361525 0.9362253304366756 0.9338018733792245 0.8920886581307726 0.8948330481785914 1.054933025954899 1.0407552804805196 0.9683658827449599 1.0 23.796177308958764 -9.442580856977214 12.792380626240147 1.0000029416632863 0.9784754137661069 0.0039723458365941156 0.06838316312919779 0.0 0.0 0.0717665991778276 0.0174059569883264 3.609268099517368e-10 9.442580856977214 -0.021527527897179377 S(ph)ISREPS(ph)PALGPNLDGSGLLPR ddPTM_KYSE-520_SHP099_60min_R1 1 SISREPSPALGPNLDGSGLLPR 22 1 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 2 S(0.544)IS(0.456)REPS(1)PALGPNLDGSGLLPR 148.3 4.1771e-07 770190000.0 295190.0 306430.0 277030.0 298800.0 270910.0 268820.0 232320.0 240760.0 314200.0 278520.0 True False 278815.22225332394 291708.642839193 294887.797063672 327197.86216250446 292229.0757329531 267142.194666284 255805.17282470322 239924.8597538066 257149.20033744044 276052.5294852812 1.0100078516693687 1.0567142542874128 1.068230737148145 1.1852739142531576 1.058599521901988 0.9677223214161047 0.9266539716251447 0.8691275540969065 0.9315227098875446 1.0 18.074583295125265 -6.34853821911678 2.8393670444496415 0.9229232937392057 1.0818736117284729 0.6478865485280605 0.05084683803227178 0.16990609266451437 2.671746220638124 0.020366685214367748 0.017865372052295245 4.481896063348703e-07 6.34853821911678 0.15895031798926718 S(ph)ISSSNPDLAVAPGSVDDEVSR ddPTM_KYSE-520_SHP099_60min_R1 1 SISSSNPDLAVAPGSVDDEVSR 22 0 Q96HP0;K7EKT0;K7EP20;K7ESB7 Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 S(0.258)IS(0.258)S(0.258)S(0.225)NPDLAVAPGSVDDEVSR 80.752 0.007124800000000001 98607000.0 114100.0 136330.0 143410.0 114600.0 114010.0 130460.0 73555.0 125100.0 144370.0 137490.0 True False 107770.64554728918 129780.50216449804 152654.43806411303 125491.54954425374 122981.93837183564 129645.75074832 80990.65722762168 124666.05729855946 118156.04727153493 136271.94556560126 0.7908498341311817 0.9523640513521675 1.1202191135564674 0.9208905693934057 0.902474371092267 0.9513752094036743 0.5943311140929797 0.9148328864105435 0.8670606908936709 1.0 17.056129058155094 S(ph)ISTSGPLDKEDTGR ddPTM_KYSE-520_SHP099_60min_R1 3 SISTSGPLDKEDTGR 15 1 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.986)IS(0.009)T(0.002)S(0.002)GPLDKEDTGR;S(0.988)IS(0.008)T(0.002)S(0.002)GPLDKEDTGR;S(0.882)IS(0.033)T(0.042)S(0.042)GPLDKEDTGR 92.47399999999999 0.0013472999999999998 669920000.0 675590.0 718400.0 728740.0 660750.0 671630.0 690290.0 631250.0 657710.0 814720.0 743420.0 True False 638113.6759447241 683886.9856596158 775715.746425227 723547.481338269 724483.4599480387 685981.6440599262 695062.9104063107 655428.557520668 666787.3854198586 736833.877172008 0.8660210879470212 0.928142701967499 1.0527688403829216 0.9819682614421412 0.9832385323115562 0.9309854843981192 0.9433101977802437 0.8895201182065946 0.9049358424981896 1.0 19.490979867712554 -6.355376778552935 6.159733490171613 0.9269784442590725 0.9665507071719921 0.06077614516695973 0.05198831189623518 0.5858987371734962 31.78231292287134 0.019463822570982798 0.01711902052761707 4.4118752255977597e-07 6.355376778552935 0.0395722629129196 S(ph)ITST(ph)PLSGK ddPTM_KYSE-520_SHP099_60min_R1 3 SITSTPLSGK 10 0 Q9P0K7-3;Q9P0K7;Q9P0K7-2;Q9P0K7-4 Q9P0K7-3 RAI14 Ankycorbin 2 S(0.984)IT(0.017)S(0.233)T(0.764)PLS(0.002)GK;S(0.971)IT(0.029)S(0.051)T(0.588)PLS(0.361)GK;S(0.961)IT(0.039)ST(1)PLSGK 250.13 2.753e-09 798375000.0 1863060.0 1804620.0 1677300.0 2707220.0 3419920.0 5046800.0 5222690.0 5733590.0 6494500.0 5183600.0 True False 1759712.3478819667 1717923.346410154 1785421.4417748873 2964513.374844625 3689048.247316971 5015301.04918459 5750650.473742461 5713701.514519971 5315262.513021989 5137677.336779771 0.3425112619051572 0.33437743046100393 0.3475152923663295 0.5770143161039271 0.7180381338679431 0.976180620234924 1.1193093876438127 1.1121176243623825 1.034565264535185 1.0 22.29268485636224 -5.890484712211965 1.2115976092803995 1.0838891827378991 0.3262964272261213 0.9784738300922773 0.0462453298161771 0.05896582999042886 0.18264560600033425 0.02044613625969906 0.02604953192673109 1.2868125498779558e-06 5.890484712211965 -0.7575927555117778 down S(ph)ITSTPLS(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 1 SITSTPLSGK 10 0 Q9P0K7-3;Q9P0K7;Q9P0K7-2;Q9P0K7-4 Q9P0K7-3 RAI14 Ankycorbin 2 S(1)IT(0.002)S(0.006)T(0.027)PLS(0.965)GK 88.28200000000001 0.0041424 401780000.0 1253200.0 1268300.0 1242200.0 1414200.0 1603300.0 1671100.0 1569200.0 1803200.0 2010800.0 1612000.0 True False 1183682.4978077349 1207368.9642428888 1322274.1995902748 1548605.1428052648 1729470.588470871 1660670.0450369294 1727830.0499161708 1796945.1200700449 1645689.4081429814 1597718.9341170208 0.7408577770043746 0.7556829542801539 0.8276012578651886 0.9692600555310444 1.0824623477512099 1.0394006164511649 1.0814355472798198 1.1246941384362616 1.0300243509678826 1.0 20.607582205362316 -5.273932574792345 1.7087823234607722 1.0678795026238088 0.7429852646969739 0.9359671902204734 0.03364623785230402 0.0790057315545102 0.4483044481650858 0.010362386098974555 0.02180604151628996 5.3219087669931525e-06 5.273932574792345 -0.3248942379268349 S(ph)ITSTPLSGK ddPTM_KYSE-520_SHP099_60min_R1 2 SITSTPLSGK 10 0 Q9P0K7-3;Q9P0K7;Q9P0K7-2;Q9P0K7-4 Q9P0K7-3 RAI14 Ankycorbin 1 S(0.999)IT(0.001)STPLSGK;S(0.998)IT(0.002)STPLSGK 115.29 0.00059964 2147100000.0 1165020.0 1071820.0 937400.0 856170.0 858720.0 1000420.0 831370.0 921960.0 1115190.0 942110.0 True False 1100394.0181902067 1020328.1583653807 997826.3038930298 937540.1393831021 926296.3785515532 994176.0076930436 915412.9929892982 918761.935947081 912699.6076521645 933763.6383504897 1.178450276918121 1.092704959220525 1.0686069396059457 1.004044386478021 0.9920030514230266 1.0646977102784527 0.9803476547945171 0.983934154439865 0.9774417959393502 1.0 19.83269788418546 -1.0000000000000058 0.47173325990828735 0.9896359451263735 6.10509495213373 0.8522661972285908 0.023958005725827066 34.35122725230839 0.39401281389320975 0.014574632479818649 171.46279377939396 0.09999999999999867 1.0000000000000058 5.115459007007357 S(ph)IVVIHPDTGR ddPTM_KYSE-520_SHP099_60min_R1 8 SIVVIHPDTGR 11 0 K7EKI8;O60437;K7EQ71 K7EKI8 PPL Periplakin 1 S(1)IVVIHPDTGR;S(1)IVVIHPDTGR;S(1)IVVIHPDTGR;S(1)IVVIHPDTGR;S(1)IVVIHPDTGR;S(1)IVVIHPDTGR;S(1)IVVIHPDTGR;S(1)IVVIHPDTGR 131.53 9.248299999999999e-05 9388640000.0 2864790.0 2651020.0 2559780.0 2429460.0 2769060.0 2514710.0 2490900.0 2675790.0 3164310.0 2748900.0 True False 2705874.3878827225 2523661.019937855 2724787.5145928115 2660355.147956217 2986969.268203798 2499014.7621056894 2742704.4808413098 2666508.309024082 2589751.069763736 2724546.8846118357 0.9931465680276691 0.9262681564378362 1.0000883192659795 0.9764394817288072 1.096317807953358 0.9172221539735853 1.0066644462358227 0.9786978980190967 0.9505254192506568 1.0 21.377584886670988 -4.797708532446415 24.999419541600886 0.9911860208878909 0.9597071640260274 0.06776126948854555 0.04602491648760688 420.2576249171558 289671.7968213738 0.011729545405354837 0.024418198764327888 1.5932776629102465e-05 4.797708532446415 -0.03147885686186347 S(ph)IYGEKFEDENFILK ddPTM_KYSE-520_SHP099_60min_R1 2 SIYGEKFEDENFILK 15 1 P62937;C9J5S7;F8WE65;P62937-2 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 1 S(1)IYGEKFEDENFILK;S(1)IYGEKFEDENFILK 194.18 2.3629e-11 348990000.0 413110.0 393850.0 362880.0 376670.0 389940.0 380060.0 338090.0 410940.0 461810.0 380840.0 True False 390193.96478563146 374928.8548190977 386271.8254285288 412468.6035500351 420626.05954489624 377687.90456390096 372267.43664042646 409514.5450541168 377956.94528272876 377466.05388903676 1.0337193524171482 0.9932783384259372 1.0233286449172478 1.0927303244897566 1.1143414227880402 1.0005877367582554 0.9862275900175688 1.0849043002274883 1.0013004914975383 1.0 18.525987380893 -9.518776160495813 14.07190601350414 0.9999998932379515 1.0378427341824177 0.06043546754129214 0.04322097615851013 0.0 0.0 0.04412737503735295 0.010702460485897078 3.028473930168923e-10 9.518776160495813 0.037842840944466216 S(ph)KDAS(ph)PINR ddPTM_KYSE-520_SHP099_60min_R1 1 SKDASPINR 9 1 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 S(1)KDAS(1)PINR 75.911 0.052798000000000005 817770000.0 1640900.0 1293000.0 1281500.0 1392100.0 1368700.0 1483500.0 1496400.0 1540400.0 1531300.0 1525700.0 True False 1549876.005946947 1230882.3391674329 1364107.540472497 1524404.7654498748 1476408.903162278 1474240.9262236168 1647670.7154566366 1535056.7119320626 1253254.5209316434 1512183.4849766383 1.0249258911665016 0.8139768430194493 0.9020780573420765 1.00808187669992 0.9763424331969126 0.9749087599950824 1.0895970838367484 1.015125960032408 0.8287714641659407 1.0 20.528201772907888 -5.253777573676287 23.65064789729023 0.9889357075052229 0.9036919047748178 0.14480711436562088 0.07750138384854464 465.71559620385034 1437572.1960478183 0.02100778819666394 0.03545568355771917 5.5747118778683925e-06 5.253777573676287 -0.0852438027304051 S(ph)KDAS(ph)PINRWS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 5 SKDASPINRWSPTR 14 2 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 3 S(1)KDAS(0.999)PINRWS(0.798)PT(0.203)R;S(1)KDAS(1)PINRWS(0.984)PT(0.016)R;S(1)KDAS(1)PINRWS(0.944)PT(0.056)R;S(0.766)KDAS(0.823)PINRWS(0.706)PT(0.706)R;S(0.996)KDAS(0.998)PINRWS(0.609)PT(0.396)R 94.45 0.0013141 3068330000.0 3279650.0 3049580.0 2762210.0 2728280.0 2796750.0 2844680.0 2558490.0 2793010.0 3624130.0 2819910.0 True False 3097721.2766798087 2903073.5992870983 2940266.4762922656 2987574.910912708 3016838.3136692513 2826925.296939532 2817127.1376561434 2783321.700203435 2966079.3488826454 2794927.791256785 1.1083367829287882 1.0386935964387416 1.0520008729707206 1.0689274049435447 1.0793975869811938 1.0114484194485607 1.0079427262732166 0.9958474451148053 1.0612364863812453 1.0 21.414379579927004 -6.2678766315354455 24.864053665068298 1.0145759600069482 1.0667605895945191 0.5617945600587044 0.023859539648136197 369.5617093889567 1427438.928781762 0.008153335370237035 0.007361064616773079 5.396639011182637e-07 6.2678766315354455 0.052184629587570974 S(ph)KDASPINR ddPTM_KYSE-520_SHP099_60min_R1 1 SKDASPINR 9 1 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.999)KDAS(0.001)PINR 115.33 0.0014423 0.0 446170.0 389510.0 331190.0 365220.0 403920.0 383120.0 370470.0 332690.0 390390.0 387450.0 True False 421420.06068215554 370797.3549335705 352539.0373227356 399930.3989926029 435706.2060095765 380728.80596885143 407920.72303877294 331535.9760404299 319505.0169310417 384017.4944315387 1.0973980789755007 0.9655741217791706 0.9180285857669045 1.0414379677796193 1.1345998875768737 0.9914360972862565 1.0622451553740233 0.8633356054030893 0.8320064100308898 1.0 18.550812510786145 -7.264803221255916 24.97345243743131 0.8857532473054222 1.0262783220146139 0.41075899514481096 0.07167677009847544 284.5376537198515 2112408.134350531 0.038169097175708475 0.01952185994842062 5.434965338833889e-08 7.264803221255916 0.14052507470919173 S(ph)KDDSDKENVCLLPDESIQK ddPTM_KYSE-520_SHP099_60min_R1 1 SKDDSDKENVCLLPDESIQK 20 2 H3BPM0;H3BS25;Q9BY12-2;Q9BY12;H3BT27;Q9BY12-3 H3BPM0 SCAPER S phase cyclin A-associated protein in the endoplasmic reticulum 1 S(0.5)KDDS(0.5)DKENVCLLPDESIQK 64.488 0.012177 527310000.0 237280.0 211530.0 220000.0 227650.0 253590.0 219510.0 206690.0 245800.0 274340.0 240420.0 True False 224117.60539404707 201367.78128699696 234181.5520124458 249285.7875545318 273546.090270273 218139.95666689985 227584.2423000085 244947.3771701511 224526.77154861065 238290.06584392991 0.9405243336532325 0.8450531941977157 0.9827583503452678 1.0461442724087526 1.1479542351103897 0.9154387359554151 0.9550723043950423 1.0279378466854823 0.9422414264456427 1.0 17.86235928221158 -4.89713998328969 6.084730606361305 1.0068368026099308 0.8940419932280853 0.3180731740766434 0.06464009514663419 0.23863313915874654 12.09737613126737 0.017709783636118453 0.03772115311590789 1.267243337795275e-05 4.89713998328969 -0.1127948093818455 S(ph)KDEYEK ddPTM_KYSE-520_SHP099_60min_R1 6 SKDEYEK 7 1 Q13247;Q13247-3;A0A590UJP7 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(1)KDEYEK;S(1)KDEYEK;S(1)KDEYEK;S(1)KDEYEK;S(1)KDEYEK;S(1)KDEYEK 108.37 0.0021579 10474200000.0 9801880.0 7426220.0 5662220.0 9204770.0 9968480.0 12027110.0 14742080.0 7206530.0 7796710.0 16138130.0 True False 9258150.176836643 7069453.24421652 6027215.761072315 10079588.573284976 10752942.663107399 11952044.345260065 16232353.315235872 7181532.229446742 6381024.003064685 15995158.723475138 0.5788095221117756 0.44197456033000204 0.3768150016683818 0.6301649610073432 0.6722623294338398 0.7472288679273164 1.014829148985725 0.4489816171006066 0.3989347097693777 1.0 23.931131972916095 -5.4546543110338535 4.096168359159741 0.7002618774460511 0.46444968031784833 0.24785318638028786 0.19173159160686004 0.357640457570028 11.609206692743184 0.05819509972674849 0.08638753693513157 3.510311759633979e-06 5.4546543110338535 -0.23581219712820273 S(ph)KDEYEKS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 SKDEYEKSR 9 2 Q13247;Q13247-3;A0A590UJP7 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 S(1)KDEYEKS(1)R;S(1)KDEYEKS(1)R;S(1)KDEYEKS(1)R 100.11 0.016617 20566800000.0 20142400.0 16528000.0 13718700.0 18789500.0 16559600.0 17179100.0 18700200.0 18652500.0 17757700.0 17035800.0 True False 19025060.91912107 15733970.070966221 14603029.352696097 20575248.430730816 17862746.308764562 17071878.864636406 20590598.71236451 18587798.831026215 14533349.315188315 16884876.065651853 1.126751587938682 0.9318380549427385 0.8648585453583746 1.2185608203892075 1.0579139722027304 1.0110751656249917 1.2194699346506335 1.1008549164798753 0.8607317731370772 1.0 24.009228254269058 -3.9147024939538735 18.571133427478767 1.0390361862605757 4.49312495123307 0.05042259948554073 0.12037057540695649 732.8522088105678 162294.03948822763 0.029770190187063023 1808.612906769088 0.00012170194136000916 3.9147024939538735 3.4540887649724943 S(ph)KDLNCLYPR ddPTM_KYSE-520_SHP099_60min_R1 1 SKDLNCLYPR 10 1 Q96DY7 Q96DY7 MTBP Mdm2-binding protein 1 S(0.995)KDLNCLY(0.005)PR 45.825 0.063276 297390000.0 257450.0 233620.0 235760.0 168410.0 209710.0 229920.0 182040.0 229800.0 305910.0 233440.0 True False 243168.73528614867 222396.5445292308 250957.46682933765 184415.6357656873 226212.98391332032 228484.9839955065 200442.37973919144 229002.87743572326 250364.45536354653 231371.90321357173 1.0509864504234452 0.9612080872410161 1.0846497061386366 0.7970528538871867 0.9777029136701643 0.9875226024509969 0.8663211779615684 0.989760961703022 1.0820866833275058 1.0 17.819854154977516 -9.69869501344102 5.350705878808986 1.0000000030237801 0.9722380180416326 0.0028428366391252125 0.0857349682269262 3.0774789102588855e-09 7.968916363785951e-10 0.0817564724537675 0.01982885493129279 2.0012667808851974e-10 9.69869501344102 -0.027761984982147547 S(ph)KDVEFQDGWPR ddPTM_KYSE-520_SHP099_60min_R1 7 SKDVEFQDGWPR 12 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 S(1)KDVEFQDGWPR;S(1)KDVEFQDGWPR;S(1)KDVEFQDGWPR;S(1)KDVEFQDGWPR;S(1)KDVEFQDGWPR;S(1)KDVEFQDGWPR;S(1)KDVEFQDGWPR 178.02 6.196e-07 5260360000.0 4381380.0 3623110.0 3355440.0 3199220.0 3337560.0 3549450.0 3364860.0 3452540.0 3965020.0 3652520.0 True False 4138336.117335511 3449050.3572010202 3571737.031293823 3503272.9069194347 3600206.9838812673 3527296.565948374 3705012.886668956 3440563.9445688897 3245072.318020236 3620161.514417556 1.1431357691788853 0.9527338334118317 0.9866236677753523 0.9677117700321922 0.99448794467959 0.9743478438463752 1.0234385598304034 0.9503896251221372 0.8963888227352564 1.0 21.787622634271088 -4.257248903976578 24.780748851923867 0.9729801737645727 1.14313584521193 0.7108857224351337 0.032773403106849244 209.54788701737706 1239128.4522123593 0.008249400146953674 0.06189907125613608 5.5303306263210656e-05 4.257248903976578 0.17015567144735733 S(ph)KEDVTVSPSQEINAPPDENKR ddPTM_KYSE-520_SHP099_60min_R1 1 SKEDVTVSPSQEINAPPDENKR 22 2 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 S(0.669)KEDVT(0.315)VS(0.004)PS(0.012)QEINAPPDENKR 166.42 1.1877e-09 522760000.0 253320.0 233400.0 233520.0 211970.0 256820.0 271020.0 201620.0 242020.0 278760.0 230880.0 True False 239267.83461909957 222187.1136594578 248573.0728452106 232115.56506889546 277030.2728940863 269328.4636502353 222001.7172215765 241180.48910789247 228144.21096774333 228834.58282192182 1.0455929854155692 0.970950766791936 1.0862565866569618 1.0143377902348216 1.2106136645861356 1.1769569980592736 0.9701405901324686 1.0539512259629837 0.9969830964985055 1.0 17.803945571550823 -6.797279013558687 24.99986971068049 1.0097646827294346 1.0816495610292636 0.23721576468251881 0.06899487975047071 330.3641839940188 230442.02967065974 0.03174829689296306 0.021405601813675703 1.5948542000263522e-07 6.797279013558687 0.07188487829982892 S(ph)KESARDPKPEASR ddPTM_KYSE-520_SHP099_60min_R1 2 SKESARDPKPEASR 14 3 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.999)KES(0.001)ARDPKPEASR;S(0.888)KES(0.112)ARDPKPEASR 97.579 0.002127 2510300000.0 2587300.0 3049400.0 3160500.0 2342970.0 2668500.0 2306210.0 1962910.0 2087360.0 3352900.0 2007070.0 True False 2443777.3113453207 2902902.246757282 3364230.8869787967 2565645.164360382 2878495.7683119336 2291816.0879448354 2161340.0989554846 2080119.4353534845 2744097.879730758 1989288.92127683 1.2284677631325551 1.4592662813876462 1.691172584834714 1.2897297807870043 1.4469973353414969 1.152078043280826 1.0864887829205943 1.0456597898400575 1.3794365666951243 1.0 20.923821395532176 -6.2812897182421334 5.894658703204822 1.1311183589200693 1.4331841468899036 0.49071387303828806 0.14777894019750693 0.1524946964543774 19.829959525901984 0.051792154203077805 0.04715995128756756 5.232512587417584e-07 6.2812897182421334 0.3020657879698343 S(ph)KFDSDEEEEDTENVEAASSGK ddPTM_KYSE-520_SHP099_60min_R1 2 SKFDSDEEEEDTENVEAASSGK 22 1 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.966)KFDS(0.034)DEEEEDTENVEAASSGK;S(0.873)KFDS(0.127)DEEEEDTENVEAASSGK 169.62 1.482e-11 1601520000.0 2755800.0 2455600.0 2520800.0 2507500.0 2500100.0 2543700.0 2583400.0 2694800.0 3227200.0 2652800.0 True False 2602930.280448899 2337629.2900692536 2683294.8014226067 2745812.0460926318 2696843.6463768613 2527823.824762394 2844555.283554314 2685452.367771046 2641221.831091622 2629298.2558471705 0.9899714780019221 0.8890696538023831 1.0205364855262637 1.0443136452802004 1.0256895125455927 0.9614062684371725 1.0818686230169756 1.021357071910346 1.0045348888122279 1.0 21.32624637344274 -4.788203444661338 24.010885023545267 1.0219198579405309 0.9395206211425724 0.4306644179419711 0.03694181838974026 104.05317749336811 93349.27827634226 0.009285925331361685 0.019340825585302927 1.628532969863646e-05 4.788203444661338 -0.08239923679795846 S(ph)KGESDDFHMDFDSAVAPR ddPTM_KYSE-520_SHP099_60min_R1 1 SKGESDDFHMDFDSAVAPR 19 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.571)KGES(0.429)DDFHMDFDSAVAPR 110.31 3.2604e-05 765400000.0 191690.0 271040.0 192680.0 205250.0 181220.0 183430.0 212410.0 226480.0 230570.0 185570.0 True False 181056.57357545884 258018.8315606656 205100.46109890038 224756.89828933708 195480.982999246 182285.14533009633 233882.47572182846 225694.3937408293 188704.30019670154 183925.9941712755 0.9843990480587285 1.402840488769594 1.1151249284965496 1.2219963757816583 1.0628241205384503 0.9910787550798764 1.2716118609315903 1.2270935098529807 1.0259795035876027 1.0 17.48876586398449 -13.999999524362009 0.17825870042485983 0.3639831383014188 1.1862366834685825 0.11016233329515657 0.12842158699710907 297.9410726312305 2.857969013800241 66.71836612647117 0.4079126601243201 1.000001095197548e-14 13.999999524362009 0.8222535451671636 S(ph)KGGVVGIK ddPTM_KYSE-520_SHP099_60min_R1 2 SKGGVVGIK 9 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 1 S(1)KGGVVGIK;S(1)KGGVVGIK 80.245 0.016863 455150000.0 1267710.0 1175630.0 941690.0 950890.0 1056790.0 1079450.0 912550.0 1006780.0 1217620.0 952900.0 True False 1197387.5991827687 1119150.9701433931 1002392.8441572736 1041262.2997044965 1139953.3606874158 1072712.752148354 1004799.4596297482 1003287.7151642176 996530.9017023365 944458.0473449819 1.267803903570742 1.1849663129977028 1.0613418425256214 1.1024971438717117 1.2069920563353782 1.1357971433076524 1.063889986913019 1.0622893393566977 1.055135169321432 1.0 19.849127188221892 -1.0000000000001126 0.1327199655111658 0.9688296766695536 1.8124303940218183 0.6146597885790346 0.04902246267576386 64.43089945754448 0.5774544723648727 0.2770983127473735 10.208678248550042 0.09999999999997408 1.0000000000001126 0.8436007173522647 S(ph)KGPSAAGEQEPDKESGASVDEVAR ddPTM_KYSE-520_SHP099_60min_R1 2 SKGPSAAGEQEPDKESGASVDEVAR 25 2 P50579-3;P50579;G3V1U3;F8VSC4 P50579-3 METAP2 Methionine aminopeptidase 2 1 S(0.996)KGPS(0.004)AAGEQEPDKESGASVDEVAR;S(1)KGPSAAGEQEPDKESGASVDEVAR 157.43 6.5393e-08 1663630000.0 640210.0 601050.0 541680.0 599530.0 526590.0 564500.0 545930.0 544470.0 730880.0 580620.0 True False 604696.2750730058 572174.6558055574 576597.5595186434 656509.1509447332 568029.6371127517 560976.7461093571 601117.9321633535 542581.3606502531 598170.6159854496 575476.1585155252 1.050775546693117 0.9942630069706376 1.0019486489344944 1.1408103380655028 0.9870602434304452 0.9748044950401245 1.044557490815906 0.9428389910189744 1.0394359646948124 1.0 19.1343966344122 S(ph)KGQESFK ddPTM_KYSE-520_SHP099_60min_R1 2 SKGQESFK 8 1 P06748;P06748-3 P06748 NPM1 Nucleophosmin 1 S(0.999)KGQES(0.001)FK;S(1)KGQESFK 82.417 0.012958 1350120000.0 2509000.0 2127600.0 1863580.0 1885640.0 1902030.0 2025700.0 2117200.0 2027660.0 2520500.0 2067200.0 True False 2369820.7684325 2025386.902407294 1983709.348633427 2064850.6586616596 2051708.9399296741 2013056.8549047401 2331227.237880778 2020626.5207194039 2062840.7366343692 2048886.216257266 1.1566385432381356 0.9885306886914889 0.968189122896781 1.0077917662180167 1.001377686886666 0.9825127617784574 1.1378021968146523 0.9862072889584447 1.006810783471712 1.0 20.966408436640915 S(ph)KGS(ph)DKDFVIVR ddPTM_KYSE-520_SHP099_60min_R1 1 SKGSDKDFVIVR 12 2 A0A0A0MTL5;Q13309-2;Q13309;D6RF40;D6RAG5;D6R9R7;H0Y9I9 A0A0A0MTL5 SKP2 S-phase kinase-associated protein 2 2 S(1)KGS(1)DKDFVIVR 51.265 0.060639 974640000.0 1861500.0 1630800.0 1730000.0 1812400.0 2026100.0 2289200.0 2111100.0 2574500.0 2503900.0 2283200.0 True False 1758238.8841917515 1552453.9201192968 1841518.568097867 1984649.9510820692 2185542.543067944 2274912.2536643744 2324510.5903505147 2565569.6603928152 2049254.8781824247 2262972.624302718 0.776959855947666 0.6860241716788992 0.8137608684794797 0.877010145756223 0.9657839072363359 1.0052760821025555 1.0271934204536648 1.1337166136436738 0.9055588459952558 1.0 21.10978770142275 -5.495824521160737 1.2178046107791858 1.0260438902568132 0.7272782974759603 0.7934660792681653 0.0577494073500691 0.1931213747492847 0.5804803149429505 0.020981293244617616 0.0410003593899608 3.192827672360286e-06 5.495824521160737 -0.2987655927808529 S(ph)KGSDKDFVIVR ddPTM_KYSE-520_SHP099_60min_R1 1 SKGSDKDFVIVR 12 2 A0A0A0MTL5;Q13309-2;Q13309;D6RF40;D6RAG5;D6R9R7;H0Y9I9 A0A0A0MTL5 SKP2 S-phase kinase-associated protein 2 1 S(0.5)KGS(0.5)DKDFVIVR 51.727 0.05728099999999999 851110000.0 389930.0 303850.0 283510.0 256530.0 343540.0 341570.0 312330.0 338270.0 325640.0 303180.0 True False 368299.8055938158 289252.5899118514 301785.50823203864 280910.53407144314 370574.6435247823 339438.13493104157 343903.3644470544 337096.6203228113 266511.98471637187 300494.06107047084 1.2256475362002026 0.9625900388228201 1.0042977460418592 0.9348289050064286 1.2332178619592633 1.1296001449141375 1.1444597714242457 1.1218079289885086 0.8869126523398091 1.0 18.196976952398735 -7.7556645684110315 24.99693105812687 0.9434563110420163 1.0892781499464237 0.26919633052847025 0.09927982097554734 181.97830643040743 787740.0851033278 0.07412493344645785 0.026313102400359018 1.7552356518584485e-08 7.7556645684110315 0.14582183890440736 S(ph)KKNFY(ph)RNETSSQESK ddPTM_KYSE-520_SHP099_60min_R1 1 SKKNFYRNETSSQESK 16 3 C9JG08;Q68DN1 C9JG08 C2orf16 Uncharacterized protein C2orf16 2 S(0.7)KKNFY(0.807)RNET(0.211)S(0.21)S(0.073)QESK 62.765 0.02659 728450000.0 139380.0 167460.0 118660.0 90774.0 133130.0 136160.0 149900.0 129760.0 169050.0 144960.0 True False 131648.31355285857 159414.97023741534 126309.01346271278 99401.13366780184 143606.57359391695 135310.17493401264 165053.3548830193 129309.89284621163 138354.78140370554 143675.76717717334 0.9162875280875782 1.1095466783958998 0.879125380322175 0.6918434167483903 0.9995184046369415 0.9417745079248842 1.1487904893487308 0.9000118488092256 0.9629653220023788 1.0 17.13245722710586 S(ph)KLSPS(ph)PSLR ddPTM_KYSE-520_SHP099_60min_R1 1 SKLSPSPSLR 10 1 Q5T200-2;Q5T200;A0A087WX14 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.527)KLS(0.473)PS(0.994)PS(0.006)LR 143.76 0.00069558 3033500000.0 3932300.0 3446900.0 3106000.0 3294100.0 3234900.0 3359400.0 3239200.0 3397600.0 4083000.0 3177200.0 True False 3714167.480154291 3281305.750097623 3306217.729775708 3607170.2735927207 3489468.2259367644 3338432.7384938416 3566649.9475455317 3385814.518605799 3341630.1240540063 3149052.4798242 1.179455567651143 1.0419977981061803 1.0499087426959244 1.1454779800284864 1.1081010076185103 1.0601388067944215 1.1326105139234277 1.0751851676967976 1.0611541552462656 1.0 21.58648636990681 -8.070725182940256 1.5775680230527234 1.000520779259578 1.098474358479115 0.3578141137016725 0.04161458031463734 0.5393470372068953 2.951505674085019 0.03907042523215223 0.0113751146636052 8.49717997716155e-09 8.070725182940256 0.09795357921953696 S(ph)KPAGSDGERR ddPTM_KYSE-520_SHP099_60min_R1 1 SKPAGSDGERR 11 2 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.5)KPAGS(0.5)DGERR 51.54600000000001 0.04666 954600000.0 227990.0 214120.0 190920.0 172310.0 178490.0 196860.0 164880.0 198470.0 228460.0 290810.0 True False 215342.94021320302 203833.3537993278 203227.0086828005 188686.29059310944 192536.14753082138 195631.32371849075 181547.67947373065 197781.55389324625 186977.42300793008 288233.6496467566 0.7471124224292187 0.707180976437466 0.7050773181128033 0.6546296410025445 0.6679863637253428 0.6787247913567546 0.6298628896946126 0.6861848161574352 0.6487008829020463 1.0 18.136879246259838 -10.14608103712383 5.360590238560298 1.0000084761320998 0.6795890324099905 0.9000104643343289 0.031935854064493875 3.40069616060769e-06 5.416881177956524e-07 0.032504323506061826 0.007883247994048248 7.143630171618356e-11 10.14608103712383 -0.3204194437221093 S(ph)KPKSDRGS(ph)HSHSR ddPTM_KYSE-520_SHP099_60min_R1 1 SKPKSDRGSHSHSR 14 3 Q13247;Q13247-3;A0A590UJP7 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 S(0.729)KPKS(0.271)DRGS(0.984)HS(0.009)HS(0.007)R 64.2 0.032767000000000004 116110000.0 47897.0 48845.0 35826.0 52413.0 46789.0 54393.0 31470.0 37306.0 61742.0 25728.0 True False 45240.057929697665 46498.41288216026 38135.40128362674 57394.315761456965 50471.028107006554 54053.51311094113 34651.2947176025 37176.59419328584 50531.20918916058 25500.069936081105 1.7741150531389576 1.823462170837725 1.4955018311407604 2.250751307950233 1.979250575920696 2.1197397986135944 1.3588705758243018 1.4579016562100928 1.9816106118854946 1.0 14.638213583351192 -9.529803938640606 0.39076421694115937 0.7757251226175657 1.869826869326452 0.4311606708860968 0.27798835451265347 8.734612455334888 1.2755356635321173 2.8770604276082317 0.2058746831174181 2.952541844842733e-10 9.529803938640606 1.0941017467088863 S(ph)KPLTR ddPTM_KYSE-520_SHP099_60min_R1 5 SKPLTR 6 1 P26368-2;P26368 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 1 S(0.998)KPLT(0.002)R;S(0.999)KPLT(0.001)R;S(1)KPLTR;S(0.999)KPLT(0.001)R;S(1)KPLTR 109.71 0.0059298 20304800000.0 9304660.0 7470000.0 6358690.0 7760790.0 8572890.0 10386970.0 10534490.0 5520810.0 8349690.0 13004100.0 True False 8788511.961420143 7111129.9873014055 6768581.331663728 8498373.148233406 9247527.669928307 10322141.067379106 11599419.055914737 5501659.598676744 6833596.774556089 12888893.791036712 0.6818670480108939 0.5517253926203255 0.5251483518601716 0.6593562865839896 0.7174803221948566 0.8008554678724565 0.899954584464129 0.4268527375485667 0.5301926515453451 1.0 23.6196251117226 -5.500743207232995 4.5581339443883016 0.7115419893961525 0.5828983051946005 0.1336269034777171 0.15964511187134675 0.4794019610291128 24.733675523565335 0.048766889722264256 0.06967202035946543 3.1568706888517765e-06 5.500743207232995 -0.12864368420155203 S(ph)KPNLPSESRS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SKPNLPSESRSR 12 2 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 2 S(0.875)KPNLPS(0.125)ES(0.02)RS(0.98)R 110.6 0.011117 0.0 724070.0 661800.0 552420.0 624070.0 619440.0 660400.0 619370.0 657830.0 742550.0 605280.0 True False 683904.3937022405 630006.134617948 588029.8771032512 683381.425166513 668186.4038685191 656278.1986370577 681981.9640686839 655548.1412686757 607721.6381622106 599917.6901007139 1.1399970445736098 1.0501542878526935 0.9801842599516161 1.1391253107601933 1.1137968006183387 1.0939470688501984 1.1367925555824052 1.092730139627359 1.0130083646311323 1.0 19.194405048109 -10.835742022059113 5.168017886486197 0.9879795728782059 1.0848805270760429 0.19196084044378936 0.05194995958522069 0.008288310101926015 0.0002634317117243807 0.05794368089815032 0.012556547110023806 1.459681076947927e-11 10.835742022059113 0.09690095419783695 S(ph)KS(ph)PFRK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPFRK 7 2 Q5QP22;Q5QP23;G3XAC6;Q14498-2;Q14498;Q14498-3 Q5QP22;Q14498-3 RBM39 RNA-binding protein 39 2 S(1)KS(1)PFRK 54.198 0.049558 6708600000.0 23153000.0 20272000.0 17587000.0 21502000.0 18547000.0 19965000.0 19942000.0 19906000.0 22370000.0 17479000.0 True False 21868656.935638793 19298102.691107668 18720686.16019493 23545543.61518799 20006543.3820054 19840391.029359285 21957931.975164577 19836950.73209533 18308171.9018095 17324149.658456244 1.2623220975792189 1.113942275469082 1.0806121240736921 1.3591168443696149 1.15483552015148 1.145244726033339 1.2674753109424044 1.1450461421298415 1.0568006085581774 1.0 24.04628120482017 -7.785007695331646 2.5781263716699305 1.0050783629364521 1.1931656506319004 0.42704504117391595 0.07822095664596176 0.2624439200405214 3.3032336718729183 0.0731520201688726 0.020639979788013168 1.6405607035910705e-08 7.785007695331646 0.18808728769544825 S(ph)KS(ph)PPKS(ph)PEEEGAVS(ph)S ddPTM_KYSE-520_SHP099_60min_R1 6 SKSPPKSPEEEGAVSS 16 2 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 4 S(1)KS(1)PPKS(1)PEEEGAVS(0.556)S(0.444);S(1)KS(1)PPKS(1)PEEEGAVS(0.556)S(0.444);S(1)KS(1)PPKS(1)PEEEGAVS(0.54)S(0.46);S(1)KS(1)PPKS(1)PEEEGAVS(0.559)S(0.441);S(1)KS(1)PPKS(1)PEEEGAVS(0.83)S(0.17);S(1)KS(1)PPKS(1)PEEEGAVS(0.543)S(0.457) 158.94 5.6009999999999997e-08 25385800000.0 6996390.0 6296880.0 5316970.0 5927480.0 6253410.0 5927060.0 5819510.0 6381590.0 6878630.0 6108570.0 True False 6608286.299742305 5994368.432990429 5659710.393652786 6490825.917038147 6745517.789964209 5890067.020008722 6407802.8637443585 6359453.753764296 5629644.188151274 6054452.822195546 1.091475397333416 0.990076000099489 0.9348013040756318 1.0720747370006525 1.1141416058665496 0.9728487764271303 1.0583620108911307 1.0503762999772037 0.9298353383006093 1.0 22.529565149990958 -7.752126563575454 24.998760286903725 0.9649176616897307 1.03315909810255 0.2088974274838502 0.054803553070482784 286.9835171865954 770375.4036112003 0.03909255881433329 0.014335411930677786 1.7695931823008502e-08 7.752126563575454 0.06824143641281932 S(ph)KS(ph)PPKS(ph)PEEEGAVSS ddPTM_KYSE-520_SHP099_60min_R1 5 SKSPPKSPEEEGAVSS 16 2 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 3 S(1)KS(1)PPKS(1)PEEEGAVSS;S(1)KS(1)PPKS(1)PEEEGAVSS;S(1)KS(1)PPKS(1)PEEEGAVSS;S(1)KS(1)PPKS(1)PEEEGAVSS;S(1)KS(1)PPKS(0.998)PEEEGAVS(0.001)S(0.001) 86.49799999999999 0.0020769 16199300000.0 9621750.0 8551800.0 7200230.0 7844720.0 8305240.0 8640030.0 8102940.0 8838360.0 9525010.0 8169240.0 True False 9088012.3470169 8140958.6914864965 7664368.3465753365 8590279.830198934 8958815.137648491 8586104.3679136 8922064.25227359 8807701.79204872 7795508.289962198 8096866.889172539 1.1224109858060975 1.0054455387395487 0.9465844568624986 1.0609387492446254 1.1064545410309985 1.0604230606032674 1.1019156390238474 1.0877913534464472 0.9627808381519363 1.0 22.948932329435102 -4.242832215777218 23.471275714130275 1.0425346997160925 1.1224111486893824 0.17796957631310295 0.053917200345980194 3471.9009889078065 4379337.666678769 0.014291810412015467 0.42280501280381627 5.7169946292519144e-05 4.242832215777218 0.07987644897328994 S(ph)KS(ph)PPKS(ph)PEEEGAVSS(ph) ddPTM_KYSE-520_SHP099_60min_R1 2 SKSPPKSPEEEGAVSS 16 2 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 4 S(1)KS(1)PPKS(1)PEEEGAVS(0.444)S(0.556);S(1)KS(1)PPKS(1)PEEEGAVS(0.452)S(0.548) 155.76 2.099e-06 2317320000.0 2996400.0 2513230.0 2112490.0 2473950.0 2374020.0 2611580.0 2477510.0 2763730.0 2946060.0 2501740.0 True False 2830183.718824686 2392490.6583648594 2248664.485503507 2709073.4641798073 2560841.8676739326 2595280.1605035863 2727960.8889675075 2754143.26568943 2411129.7681289613 2479576.529924268 1.1413980107769155 0.9648787321107333 0.9068744030950262 1.09255489051695 1.032773877623429 1.046662657588089 1.1001720882762291 1.1107313012732654 0.9723957857443516 1.0 21.24166232286203 -5.355826990997614 21.359825947550334 1.056508441755752 1.000227249047105 0.08264042716077769 0.06853389174160451 32.263738450376614 7293.829858108656 0.019261559122612203 0.028569536458878882 4.407304014063389e-06 5.355826990997614 -0.056281192708647065 S(ph)KS(ph)PPKSPEEEGAVS(ph)S ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPPKSPEEEGAVSS 16 2 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 3 S(0.999)KS(0.996)PPKS(0.014)PEEEGAVS(0.56)S(0.431) 93.81200000000001 0.014785 1608700000.0 1565600.0 1385600.0 1161900.0 1332200.0 1311100.0 1378700.0 1298400.0 1409400.0 1569800.0 1266900.0 True False 1478753.0470537758 1319033.6961719985 1236797.9331057295 1458811.8874594644 1414276.1108614467 1370095.0218972007 1429654.9431628555 1404511.1203564336 1284763.8914376628 1255676.2516332858 1.1776547060839362 1.0504568310950393 0.9849656163338274 1.1617738932005408 1.1263063301721814 1.0911212345659065 1.1385537803261563 1.118529651675386 1.0231649199119137 1.0 20.260033114469447 -7.852958834783269 4.753776846079826 1.0023780025982376 1.1033120394208977 0.33971212022329444 0.05291954682400444 0.25162625474975325 9.111705845867618 0.05239608787604846 0.013812102099445169 1.4029466785450404e-08 7.852958834783269 0.10093403682266011 S(ph)KS(ph)PPKSPEEEGAVSS ddPTM_KYSE-520_SHP099_60min_R1 5 SKSPPKSPEEEGAVSS 16 2 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 2 S(1)KS(1)PPKSPEEEGAVSS;S(1)KS(1)PPKSPEEEGAVSS;S(0.999)KS(0.996)PPKS(0.005)PEEEGAVSS;S(0.992)KS(0.993)PPKS(0.014)PEEEGAVSS;S(0.999)KS(0.999)PPKS(0.002)PEEEGAVSS 102.48 0.00070185 5982690000.0 8502400.0 7449890.0 6917610.0 7157010.0 8023580.0 7764620.0 7399570.0 7585460.0 8783000.0 8086300.0 True False 8030754.9228858 7091986.101887127 7363530.209167341 7837210.078566485 8654990.098074669 7716158.126440456 8147590.748443904 7559147.809719676 7188228.601412286 8014661.673046196 1.002007976193646 0.8848765414188245 0.9187574609582522 0.9778591284674572 1.0798946295115535 0.9627553153479173 1.016585737591988 0.94316492923732 0.8968848461297805 1.0 22.93421018977629 -5.312084010262361 6.821442024442125 0.9849391450047547 0.930234035943021 0.1423110376811575 0.05254748989541863 0.42012972180202723 46.99242128817467 0.015359027874192502 0.02305505928567849 4.874341913339827e-06 5.312084010262361 -0.05470510906173365 S(ph)KS(ph)PPKVPIVIQDDSLPAGPPPQIR ddPTM_KYSE-520_SHP099_60min_R1 9 SKSPPKVPIVIQDDSLPAGPPPQIR 25 2 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 2 S(1)KS(1)PPKVPIVIQDDSLPAGPPPQIR;S(0.981)KS(0.981)PPKVPIVIQDDS(0.039)LPAGPPPQIR;S(1)KS(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)KS(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)KS(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)KS(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)KS(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)KS(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)KS(1)PPKVPIVIQDDSLPAGPPPQIR 180.6 2.8195e-11 7988870000.0 5138060.0 4794020.0 4559270.0 4413580.0 4675440.0 4466920.0 4352130.0 4737560.0 5488350.0 4611380.0 True False 4853041.569331323 4563708.083229278 4853167.839289925 4833045.316208786 5043370.528385361 4439040.295360155 4792085.773095631 4721126.510114813 4491803.990044528 4570526.760799349 1.0618123081468545 0.9985081199767708 1.0618399351503074 1.0574372647067762 1.1034549828351328 0.9712316605239179 1.0484755967729051 1.0329501952832074 0.9827759960996151 1.0 22.123929017189187 -7.676597353566733 4.961453781679932 0.9916123125243144 1.0421743904657201 0.2583568299517749 0.03451811713433027 0.28076706805067664 11.546842867391511 0.025645881809018715 0.008841507762891587 2.1057298154274356e-08 7.676597353566733 0.05056207794140577 S(ph)KS(ph)PVLHPPK ddPTM_KYSE-520_SHP099_60min_R1 8 SKSPVLHPPK 10 1 Q9NX31 Q9NX31 OSER1 Oxidative stress-responsive serine-rich protein 1 2 S(1)KS(1)PVLHPPK;S(1)KS(1)PVLHPPK;S(1)KS(1)PVLHPPK;S(1)KS(1)PVLHPPK;S(1)KS(1)PVLHPPK;S(1)KS(1)PVLHPPK;S(1)KS(1)PVLHPPK;S(1)KS(1)PVLHPPK 97.551 0.0016555 6445470000.0 8874580.0 7686650.0 7397540.0 7717540.0 8206700.0 7600100.0 7432280.0 8401760.0 9074560.0 7455810.0 True False 8382289.356363377 7317371.796103134 7874397.264882485 8451012.681236997 8852520.60026439 7552664.956786049 8183607.394462755 8372616.25554553 7426848.655041774 7389757.323932397 1.1343118574701465 0.9902046136759003 1.065582659850079 1.1436116655505897 1.1979446972628862 1.022045058546924 1.1074257293888938 1.1330028698547454 1.0050192894683094 1.0 22.81709555706395 -7.776924831319592 24.296772392278445 1.0025094478642422 1.0969733907960144 0.31040505926521555 0.05760527178633429 256.2117612176216 401981.33762359415 0.056764525193046235 0.014896694502417549 1.6713798755215514e-08 7.776924831319592 0.09446394293177218 S(ph)KS(ph)RS(ph)PS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SKSRSPSPK 9 2 Q16629;C9JAB2 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 4 S(1)KS(1)RS(1)PS(1)PK;S(1)KS(1)RS(1)PS(1)PK 149.57 0.00015536 0.0 2244300.0 1823530.0 1723420.0 2202800.0 1739740.0 1968070.0 1763580.0 1941400.0 2115000.0 1232290.0 True False 2119804.2050988693 1735924.8816256656 1834514.4107694963 2412153.4497040324 1876647.6402334634 1955786.5451115018 1941859.877282156 1934665.7365261677 1730969.3148112232 1221372.8693071133 1.7355913647414138 1.4212898658953006 1.5020101206359848 1.9749525393276917 1.5365067354886377 1.601301776271666 1.5898993060029047 1.5840090975851677 1.4172324916576906 1.0 20.220072272990492 -8.252040663133563 1.2709294468005135 0.9994938432479635 1.6235822359055077 0.640200846517913 0.14165517803129823 0.5809631362717942 1.7172838062988598 0.13725597144097224 0.041615433297101975 5.597051936623813e-09 8.252040663133563 0.6240883926575441 S(ph)KS(ph)RS(ph)PS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSRSPSPKR 10 3 Q16629;C9JAB2 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 4 S(1)KS(1)RS(1)PS(1)PKR 42.568000000000005 0.051197 523920000.0 694410.0 496160.0 570150.0 693460.0 504560.0 616920.0 592140.0 561280.0 701740.0 410020.0 True False 655889.6930279839 472323.7288486569 606902.7812722537 759366.2299036479 544266.0014463054 613069.5734451461 651999.2899294937 559333.0506837362 574321.7054258288 406387.54179073306 1.6139512794556348 1.162249528534704 1.4934089234083234 1.8685765477886604 1.339278263915315 1.508583581926935 1.604378143720845 1.3763538326471672 1.413236495624594 1.0 18.63249664999123 -8.439663773500532 1.0959073633811565 1.0001177416374865 1.5026559004793265 0.4198679525174941 0.1760302031261196 1.6201700753974106 2.9496584708897133 0.172163527248789 0.05373112241931066 3.633592550521015e-09 8.439663773500532 0.50253815884184 S(ph)KS(ph)YS(ph)PGRR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSYSPGRR 9 2 J3QK89;Q8IWX8 J3QK89 CHERP Calcium homeostasis endoplasmic reticulum protein 3 S(1)KS(0.898)Y(0.415)S(0.688)PGRR;S(0.99)KS(0.616)Y(0.42)S(0.973)PGRR 84.29700000000001 0.033708 2364300000.0 3677100.0 3254450.0 2605220.0 3608400.0 2825800.0 3269380.0 3222780.0 3553800.0 3588200.0 3113780.0 True False 3473123.93288288 3098101.3369709584 2773156.649699382 3951341.251094984 3048174.383397357 3248974.586705069 3548570.053701781 3541472.697263155 2936673.331161054 3086194.331684183 1.1253743476962268 1.0038581514989298 0.898568382823135 1.2803280760802505 0.9876806369914892 1.0527446549135662 1.1498206763166703 1.1475209648676012 0.951551657331464 1.0 21.557397477807665 S(ph)KSATLLYDQPLQVFTGSSSSSDLISGTK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSATLLYDQPLQVFTGSSSSSDLISGTK 29 1 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 S(0.421)KS(0.421)AT(0.157)LLY(0.002)DQPLQVFTGSSSSSDLISGTK 97.479 0.00011162 46733000.0 89411.0 89723.0 80168.0 82507.0 75895.0 94029.0 70194.0 99075.0 126370.0 90414.0 True False 84451.1935935904 85412.57240303134 85335.75755333522 90348.4404733658 81867.50471652023 93442.13013271337 77289.89454742263 98731.3319492788 103424.39352846073 89613.00230102765 0.9423988866024406 0.9531270040045502 0.9522698198044485 1.0082068243832258 0.913567257143235 1.0427296009882911 0.8624852706953252 1.1017523061845522 1.1541226258778599 1.0 16.451420453286406 -7.288429007026269 24.620449414502087 1.095953152777256 0.9574713263409957 0.5165932703553364 0.05804344887179058 455.2758739407778 415308.4915008271 0.029190472565043406 0.014028954212230594 5.147199400483305e-08 7.288429007026269 -0.13848182643626017 S(ph)KSDATASISLSSNLK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSDATASISLSSNLK 16 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.738)KS(0.261)DATASISLSSNLK 70.167 0.014399 567880000.0 2007000.0 1793300.0 1850900.0 1777000.0 1809900.0 1817100.0 1760300.0 1995200.0 2173800.0 1869100.0 True False 1895667.70914469 1707147.176201821 1970211.9755447078 1945885.5457254683 1952328.8330776684 1805758.804880981 1938248.3028724408 1988279.1168831824 1779092.7170386012 1852541.2281377972 1.0232796335929562 0.9215164284996084 1.0635185579784343 1.0503871742069149 1.0538652546157794 0.9747468922438813 1.046264597749761 1.0732711837575841 0.9603525632878748 1.0 20.821074219260456 -4.772668779449531 24.999952523185996 1.0309197751712047 0.972398014452967 0.20923757968138168 0.04273909639304664 263.63036351967196 586922.3595586728 0.010752346975997898 0.022704622530068348 1.6878397884466368e-05 4.772668779449531 -0.05852176071823767 S(ph)KSDGEAKPEPSPSPR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSDGEAKPEPSPSPR 16 2 K7ENQ6;K7ERQ1;P26358;K7EJL0 K7ENQ6;P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 S(0.5)KS(0.5)DGEAKPEPSPSPR 56.513999999999996 0.051817999999999996 466920000.0 1029600.0 933540.0 962070.0 951470.0 1025700.0 1055900.0 1089600.0 1296000.0 1493100.0 1183700.0 True False 972486.0355432851 888691.3371278928 1024086.5715664249 1041897.4227301123 1106416.7545653158 1049309.7364337817 1199747.401471232 1291504.478488675 1221990.6779880081 1173213.338904664 0.8289080965029072 0.7574848560429711 0.8728903240416046 0.8880715792942221 0.9430652702928601 0.8943895382347415 1.0226165708202235 1.1008266234804747 1.0415758476875858 1.0 20.162033948414575 -6.048882188515804 0.6672369321412291 1.0595427840727372 0.7924814482131008 0.7998800142624113 0.045024566228257415 0.33231541811215054 0.32839748741905783 0.03343465522434459 0.04398730307625321 8.935478444471829e-07 6.048882188515804 -0.2670613358596363 S(ph)KSDLSER ddPTM_KYSE-520_SHP099_60min_R1 3 SKSDLSER 8 1 Q9BQ89;V9GZ26 Q9BQ89 FAM110A Protein FAM110A 1 S(0.762)KS(0.237)DLS(0.001)ER;S(0.539)KS(0.461)DLSER;S(0.84)KS(0.159)DLS(0.001)ER 142.07 0.00038357 8861050000.0 10145490.0 9162790.0 8390910.0 8584300.0 9462060.0 8739930.0 8388830.0 8408990.0 10493210.0 8557340.0 True False 9582699.445167104 8722595.814771822 8931801.484530695 9400149.291036103 10206670.290243048 8685380.854957568 9236854.803491106 8379821.17636303 8587907.576298015 8481528.625109771 1.1298316457716466 1.0284226111020087 1.053088644668118 1.108308384788885 1.2033998517703464 1.024034845469281 1.0890554299545925 0.9880083587237289 1.0125424267122445 1.0 23.01589287433897 -7.12631184791583 1.848557668466843 0.9975550540570556 1.0937828992357652 0.3954878084898067 0.05030195603009036 0.40560909546239254 2.6374544928799812 0.03524279190511967 0.01593656453392014 7.476324654750415e-08 7.12631184791583 0.09622784517870964 S(ph)KSDSYTLDPDTLR ddPTM_KYSE-520_SHP099_60min_R1 3 SKSDSYTLDPDTLR 14 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 S(0.788)KS(0.161)DS(0.025)YT(0.025)LDPDTLR;S(0.5)KS(0.5)DSYTLDPDTLR;S(0.599)KS(0.395)DS(0.006)YTLDPDTLR 146.81 2.5109e-06 6196020000.0 11206970.0 10438530.0 10133570.0 10422960.0 11190940.0 10194610.0 10772240.0 11600860.0 13795590.0 10947370.0 True False 10585297.033559175 9937047.350247033 10786796.136485286 11413554.984622808 12071603.310261456 10130981.657491425 11861203.146131136 11560619.32432107 11290658.614523202 10850384.818724979 0.9755688125725891 0.9158244169458617 0.9941394998147941 1.0519032435537163 1.1125507078264145 0.9336979127236069 1.0931596753749917 1.0654570798604681 1.0405767908838057 1.0 23.371242874274945 -5.030704173544651 3.7840476269719328 1.0452021981654358 0.9460712509420797 0.3883824047947094 0.048676375413091735 0.20879812392079916 6.407798826673329 0.01308038690129656 0.026297510868835014 9.317423301694621e-06 5.030704173544651 -0.09913094722335614 S(ph)KSEEAHAEDSVMDHHFR ddPTM_KYSE-520_SHP099_60min_R1 4 SKSEEAHAEDSVMDHHFR 18 1 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 S(0.5)KS(0.5)EEAHAEDSVMDHHFR;S(0.5)KS(0.5)EEAHAEDSVMDHHFR;S(0.786)KS(0.214)EEAHAEDSVMDHHFR;S(0.656)KS(0.344)EEAHAEDSVMDHHFR 255.67 6.194300000000001e-25 4563880000.0 1302010.0 1352710.0 1515870.0 2479690.0 1235200.0 1172260.0 1442140.0 1488150.0 1498680.0 885300.0 True False 1229784.909807414 1287723.781140894 1613585.4056777565 2715358.992054019 1332403.212673375 1164943.4905122323 1587925.5851300706 1482987.9549868202 1226557.4906483623 877456.9307529767 1.4015330743949932 1.467563519084467 1.8389340252781206 3.0945780891192847 1.5184827493812065 1.327636092078677 1.8096906292225827 1.690097716493294 1.3978549233132276 1.0 19.74296878810015 -5.944070727826914 24.999983398905716 1.5011817600651476 1.957960667689836 0.20082527533755368 0.4773900136683778 165.06103524514668 73779.98692837132 0.15686792963942825 0.17787151803230505 1.1374420305241191e-06 5.944070727826914 0.4567789076246884 S(ph)KSEQYDLDSLCAGMEQSLR ddPTM_KYSE-520_SHP099_60min_R1 3 SKSEQYDLDSLCAGMEQSLR 20 1 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 S(0.586)KS(0.414)EQYDLDSLCAGMEQSLR;S(0.607)KS(0.393)EQYDLDSLCAGMEQSLR;S(0.628)KS(0.372)EQYDLDSLCAGMEQSLR 193.06 3.2249e-13 1143340000.0 883120.0 841290.0 784380.0 732560.0 831660.0 859910.0 793740.0 786060.0 1021190.0 917640.0 True False 834131.5731439254 800873.1655979643 834942.3898523733 802182.2821478045 897106.9105018935 854542.9827225811 873978.9853558879 783333.341327784 835767.6381050004 909510.4235131171 0.9171215101878328 0.8805541364819927 0.9180129971763117 0.8819935004694702 0.9863624289611621 0.9395637044177941 0.9609334459082021 0.8612692291112446 0.9189203515411353 1.0 19.79473064652414 -5.723738436887204 24.999990959839327 0.9381458322255684 0.8994009663544843 0.2452109169758303 0.03777612568228556 289.0232810794404 191653.7931360098 0.01136224180361477 0.014668274475730724 1.889128774631583e-06 5.723738436887204 -0.038744865871084055 S(ph)KSIEEREEEYQR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSIEEREEEYQR 13 2 Q15032-2;Q15032-4;Q15032;Q15032-3;H7C2F9;Q9UBL0;B5MCU0;H7C0E9 Q15032-2;B5MCU0 R3HDM1;ARPP21;R3HDM2 R3H domain-containing protein 1;cAMP-regulated phosphoprotein 21 1 S(0.5)KS(0.5)IEEREEEYQR;S(0.5)KS(0.5)IEEREEEYQR 96.544 0.0011732000000000001 138960000.0 204579.0 218697.0 211473.0 147324.0 152115.0 165529.0 127993.0 163265.0 247735.0 160097.0 True False 193230.59505187406 208190.46784911028 225104.88794876335 161325.62866542413 164085.58508404304 164495.87211113502 140931.7815313027 162698.67182133743 202752.5688911389 158678.6651335812 1.2177477979740114 1.3120255812200607 1.4186210084340087 1.0166812818195479 1.0340746498334235 1.0366602969129888 0.8881583507944274 1.0253342608117608 1.2777557003044784 1.0 17.275748640573966 -5.2724525175349495 24.701248924915692 1.0341758689076406 1.315720873742707 0.6099088188364402 0.1011985626422723 396.746995409584 889858.8083335314 0.02924443237402428 0.04386751010727111 5.340076547298051e-06 5.2724525175349495 0.2815450048350665 S(ph)KSLCHDEIENLLDSDHR ddPTM_KYSE-520_SHP099_60min_R1 3 SKSLCHDEIENLLDSDHR 18 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 S(0.5)KS(0.5)LCHDEIENLLDSDHR;S(0.5)KS(0.5)LCHDEIENLLDSDHR;S(0.5)KS(0.5)LCHDEIENLLDSDHR 220.69 1.3603999999999999e-18 1140440000.0 948913.0 1393860.0 1383320.0 2895750.0 1081460.0 1034150.0 904458.0 875562.0 1207920.0 901700.0 True False 896274.9042788319 1326896.8733734873 1472491.0205902578 3170961.209361014 1166564.749334315 1027695.4862515342 995889.4412994374 872524.879779706 988592.1771852358 893711.6395119843 1.0028681116520395 1.4847035830237658 1.6476131175759543 3.5480809124210726 1.3053032966778004 1.1499184309747967 1.1143297203147626 0.9762935170634597 1.1061645988241369 1.0 19.769449888223836 -5.981379813453716 24.99986468898958 1.0881085770963221 1.9397185127081495 0.30069400051294226 0.6149782261401591 323.60821255962816 434481.18283415784 0.20123288405262674 0.22814219583731646 1.0438069556381866e-06 5.981379813453716 0.8516099356118274 S(ph)KSLGDLTADDFAPSFEGGSR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSLGDLTADDFAPSFEGGSR 21 1 B9DI82;O75038-3;O75038 B9DI82 PLCH2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 1 S(0.426)KS(0.426)LGDLT(0.148)ADDFAPSFEGGSR 52.32899999999999 0.051722000000000004 0.0 162380.0 164960.0 145890.0 162180.0 156650.0 132590.0 138370.0 161220.0 194710.0 124170.0 True False 153372.45770349508 157035.0739899918 155294.30283225307 177593.53843880503 168977.46378342272 131762.45662823683 152357.78996106307 160660.76544903076 159355.57223966613 123069.95040279816 1.2462218210173908 1.2759822643628969 1.2618376973744376 1.4430292517186811 1.3730196788929623 1.0706306145162876 1.237977178526587 1.3054426764876468 1.2948373808399858 1.0 16.909119021011072 -6.231214981671306 24.995414918308448 1.2043801571026673 1.321173409247804 0.29529598439443705 0.10387622507990225 1089.5087852032295 901018.8338708417 0.03522733958166578 0.035224139405029234 5.871986092822118e-07 6.231214981671306 0.1167932521451367 S(ph)KSLKEGLTVQER ddPTM_KYSE-520_SHP099_60min_R1 1 SKSLKEGLTVQER 13 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.608)KS(0.392)LKEGLTVQER 70.09100000000001 0.017587000000000002 784460000.0 555480.0 659280.0 631530.0 397470.0 450020.0 422220.0 335130.0 358900.0 686270.0 358370.0 True False 524666.4170780724 627607.1992005453 672239.4342837274 435245.4292962865 485434.01373645704 419584.76836544374 369008.21095361066 357655.05966788996 561660.667458865 355195.12060764106 1.4771216906935902 1.7669364323667571 1.8925919734868848 1.225369955960266 1.366668587411936 1.1812796517239588 1.0388887390185406 1.0069255992482122 1.5812736011069584 1.0 18.43825223764648 -5.276927878666752 22.90240054133585 1.1997907579863316 1.717688619076261 0.5992836628309721 0.19190260558696315 172.1190560165394 254507.28689515393 0.054161423749766346 0.08076620470367862 5.2853301559081416e-06 5.276927878666752 0.5178978610899294 S(ph)KSLTNLVAAGDDVLEDQEILMHHPPQVDELDR ddPTM_KYSE-520_SHP099_60min_R1 4 SKSLTNLVAAGDDVLEDQEILMHHPPQVDELDR 33 1 Q7Z5Y7-2;Q7Z5Y7-3;Q7Z5Y7 Q7Z5Y7-2 KCTD20 BTB/POZ domain-containing protein KCTD20 1 S(0.497)KS(0.497)LT(0.006)NLVAAGDDVLEDQEILMHHPPQVDELDR;S(0.499)KS(0.499)LT(0.003)NLVAAGDDVLEDQEILMHHPPQVDELDR;S(0.498)KS(0.498)LT(0.005)NLVAAGDDVLEDQEILMHHPPQVDELDR;S(0.333)KS(0.333)LT(0.333)NLVAAGDDVLEDQEILMHHPPQVDELDR 241.22 2.6949e-31 406870000.0 110235.0 120872.9 105115.5 102345.1 112156.0 105533.5 104734.7 122308.2 142936.3 108116.1 True False 104120.04480197563 115065.98445007825 111891.41332074648 112071.94753282359 120982.0391196526 104874.82628083587 115322.30558816902 121883.94140114852 116982.67105089905 107158.27546705292 0.9716472605420807 1.07379466446767 1.0441695971035743 1.0458543406410215 1.1290032299637927 0.9786908740714185 1.07618665087258 1.1374197734137965 1.0916811654632008 1.0 16.709383743156483 -4.258808508664109 23.82881002685905 1.066928919481443 0.971647193089892 0.25049085453067665 0.04774437815299787 175.6722129215487 1590949.0334574631 0.011821567122427889 0.076920869003379 5.5105061489201373e-05 4.258808508664109 -0.09528172639155108 S(ph)KSPCQTLGGR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPCQTLGGR 11 1 B4DFJ1;Q9BSI4-2;Q9BSI4 B4DFJ1 TINF2 TERF1-interacting nuclear factor 2 1 S(0.666)KS(0.33)PCQT(0.004)LGGR 75.462 0.033651 0.0 506750.0 428610.0 381740.0 359040.0 423240.0 380740.0 410990.0 388400.0 477900.0 413950.0 True False 478639.56731892 408018.9322432735 406347.5712055956 393163.0536506878 456546.58009381354 378363.66043166816 452536.8800758643 387052.7310532414 391125.40687862114 410282.7250482272 1.1666091163420487 0.9944823589521407 0.9904086777181053 0.958273477403839 1.1127609139286774 0.9222022701228597 1.1029878969987594 0.9433805213410943 0.9533070319561854 1.0 18.64625888527967 -4.2605134228676915 24.454348644861547 0.9988569718335112 1.1666091842899047 0.41273624961216193 0.06048518205729868 55.293793349764464 1459988.9803475318 0.014184110786444553 0.08320898742684073 5.488915905905329e-05 4.2605134228676915 0.1677522124563935 S(ph)KSPEILSSTK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPEILSSTK 11 1 Q4KMZ1;Q4KMZ1-3 Q4KMZ1 IQCC IQ domain-containing protein C 1 S(0.5)KS(0.5)PEILSSTK 97.417 0.0012950999999999998 495880000.0 573420.0 538090.0 449270.0 446980.0 461440.0 535690.0 502310.0 508880.0 657390.0 535250.0 True False 541611.2495155698 512239.34871044336 478230.6630574157 489460.84481056326 497752.7027655449 532346.5600058845 553088.3968731784 507114.8140534843 538024.5474533098 530508.1014181988 1.0209292715185483 0.9655636687565791 0.9014577944784808 0.9226265225773093 0.9382565533587717 1.003465467507039 1.0425635261640984 0.9559039959952024 1.014168390671165 1.0 19.01701525721986 -6.266369094508222 24.021054529680022 1.002923233830371 0.9464527445392382 0.36205513406577605 0.035339563112548635 281.62008188240264 1372246.1841256309 0.012965326252508225 0.011809855617024871 5.415404549682943e-07 6.266369094508222 -0.05647048929113285 S(ph)KSPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK ddPTM_KYSE-520_SHP099_60min_R1 11 SKSPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK 36 2 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.597)KS(0.403)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK;S(0.5)KS(0.5)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK;S(0.5)KS(0.5)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK;S(0.5)KS(0.5)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK;S(0.584)KS(0.416)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK;S(0.5)KS(0.5)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK;S(0.57)KS(0.43)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK;S(0.499)KS(0.499)PLPPEEEAKDEEEDQT(0.001)LVNLDTYTSDLHFQVSK;S(0.562)KS(0.438)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK;S(0.495)KS(0.495)PLPPEEEAKDEEEDQT(0.011)LVNLDTYTSDLHFQVSK;S(0.5)KS(0.5)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK 265.22 8.870900000000001e-42 32014560000.0 1136806.3 1383398.0 1264906.7 2247247.0 1171392.2 971755.3 1074014.4 1171455.4 1514727.0 1003109.6 True False 1073745.3883718248 1316937.4835572666 1346444.6098042792 2460824.6792205544 1263574.1018300918 965690.2147183729 1182586.256922436 1167391.8946371472 1239690.7599603115 994222.8293514603 1.0799846439577712 1.3245898652481314 1.354268449742374 2.475123892322781 1.270916402768916 0.9713015897535772 1.1894579585281164 1.1741753057497648 1.2468942810023502 1.0 19.923209705271145 -5.986824855212523 24.999955847106776 1.1306297525412867 1.5704248582664762 0.26138243443575493 0.35035616051282176 343.25994954328706 651335.0062582695 0.11405087297006253 0.1292527848413952 1.0308017443105247e-06 5.986824855212523 0.43979510572518943 S(ph)KSPPKS(ph)PEEEGAVS(ph)S ddPTM_KYSE-520_SHP099_60min_R1 2 SKSPPKSPEEEGAVSS 16 2 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 3 S(0.634)KS(0.603)PPKS(0.763)PEEEGAVS(0.566)S(0.434);S(0.701)KS(0.442)PPKS(0.857)PEEEGAVS(0.711)S(0.289) 109.28 0.0015065 1171520000.0 4866900.0 4178800.0 3611700.0 4085600.0 4154800.0 4504200.0 4093800.0 4389200.0 4991400.0 4086300.0 True False 4596923.3550753845 3978044.1754933186 3844515.960924319 4473894.195619569 4481759.122421736 4476087.6170518445 4507641.255637788 4373974.889646982 4085087.5829544836 4050098.561093291 1.1350151819106553 0.9822092266365682 0.949240099452425 1.10463835092741 1.1065802609040511 1.1051799232864994 1.1129707555613135 1.0799675177451147 1.0086390544164308 1.0 21.94952558642522 -3.8104042500359108 7.852853929229447 1.0565475754356004 3.553696607178184 0.15467571255887158 0.05783428866903196 18185.28217477786 16656.918547605303 0.018487552177302406 777731.9464277496 0.00015473756200216828 3.8104042500359108 2.497149031742584 S(ph)KSPPKS(ph)PEEEGAVSS ddPTM_KYSE-520_SHP099_60min_R1 2 SKSPPKSPEEEGAVSS 16 2 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 2 S(0.754)KS(0.246)PPKS(0.696)PEEEGAVS(0.163)S(0.14);S(0.717)KS(0.287)PPKS(0.996)PEEEGAVSS 88.427 0.011446 1399500000.0 2232470.0 1929880.0 1709720.0 1827940.0 1942640.0 1906310.0 1917330.0 1822310.0 2182010.0 1932460.0 True False 2108630.4387813886 1837165.6679910636 1819931.2868487202 2001666.8680097994 2095514.7158903843 1894412.0121802078 2111152.4277375536 1815988.8319403525 1785811.9879958555 1915339.9078311287 1.1009170905696504 0.9591851871720319 0.950187107472508 1.0450713525185327 1.0940693645668773 0.9890735343813626 1.1022338223653247 0.9481287496362574 0.932373403119895 1.0 20.869169013603155 -7.310976856705474 24.999346182190845 0.9551882325506287 1.0292230813173502 0.2719737674353082 0.055017486324389936 538.1814496049126 271593.4762578054 0.030510363049193967 0.01465677090810893 4.8867840003014464e-08 7.310976856705474 0.0740348487667215 S(ph)KSPPKVPIVIQDDSLPAGPPPQIR ddPTM_KYSE-520_SHP099_60min_R1 4 SKSPPKVPIVIQDDSLPAGPPPQIR 25 2 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 S(0.5)KS(0.5)PPKVPIVIQDDS(0.001)LPAGPPPQIR;S(0.5)KS(0.5)PPKVPIVIQDDSLPAGPPPQIR;S(0.572)KS(0.428)PPKVPIVIQDDSLPAGPPPQIR;S(0.58)KS(0.42)PPKVPIVIQDDSLPAGPPPQIR 169.65 1.5908e-10 18926560000.0 8653350.0 8815190.0 6486350.0 5868990.0 6370250.0 8952710.0 6254340.0 8042540.0 8522810.0 9230290.0 True False 8173331.425474436 8391695.040530052 6904470.499526938 6426777.045023808 6871552.433235553 8896832.816050837 6886589.723676196 8014642.305882944 6975282.546556146 9148516.811656954 0.8934050834404167 0.9172738284568088 0.7547092760139357 0.7024938771315226 0.7511110898850714 0.9724890929548904 0.7527547760420977 0.8760591985436111 0.7624495522234059 1.0 23.12510643710198 S(ph)KSPRDPDANWDSPSR ddPTM_KYSE-520_SHP099_60min_R1 4 SKSPRDPDANWDSPSR 16 2 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.5)KS(0.5)PRDPDANWDSPSR;S(0.5)KS(0.5)PRDPDANWDSPSR;S(0.621)KS(0.379)PRDPDANWDSPSR;S(0.569)KS(0.429)PRDPDANWDSPS(0.002)R 102.61 0.00067153 4757050000.0 3308660.0 3104460.0 2905310.0 2485640.0 2910490.0 2850160.0 2318580.0 2635870.0 3755070.0 2788140.0 True False 3125122.034149814 2955317.081710541 3092590.931260359 2721874.4782650843 3139529.0045771785 2832371.0942268306 2552964.6935601765 2626726.7821866837 3073243.945611432 2763439.2487400975 1.1308813955561405 1.0694344314093116 1.119109433171121 0.9849590431582806 1.136094815910481 1.0249442232240713 0.9238360114933302 0.9505281447327841 1.1121083798070033 1.0 21.398033466115518 -6.513915409819428 24.302851638502382 0.9899089948536556 1.0827989734187875 0.33505613856011296 0.060969736036547616 342.86503386532036 929637.2785835007 0.022131011826449522 0.01809673845703068 3.06255988903807e-07 6.513915409819428 0.09288997856513193 S(ph)KSPS(ph)PLKNK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPSPLKNK 10 2 E9PQ01;E9PKN0;O94913 E9PQ01 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 2 S(0.995)KS(0.241)PS(0.765)PLKNK 57.55 0.044805000000000005 485150000.0 764390.0 777360.0 710180.0 624630.0 652180.0 650300.0 611190.0 660080.0 772870.0 705390.0 True False 721987.7629263127 740014.4587588519 755959.3391281759 683994.6473981421 703502.8556034011 646241.2364834632 672975.0498395768 657790.3365438305 632536.2904672114 699140.7933851165 1.032678638919888 1.0584627098868489 1.0812691038495321 0.978336057443252 1.006239175656114 0.9243363319632331 0.9625744287944497 0.940855322372087 0.9047337767326981 1.0 19.415223490072886 -5.673792138120526 1.4037225120412282 0.9447297423529972 1.0573022435499986 0.6711393793251184 0.03145006315966592 0.22739452556981035 0.9305553254455585 0.01128606775148818 0.017140663862402192 2.119375267217961e-06 5.673792138120526 0.11257250119700135 S(ph)KSPS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSPSPPR 8 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 S(0.5)KS(0.5)PS(1)PPR;S(0.562)KS(0.439)PS(0.999)PPR 72.652 0.035499 828990000.0 1925500.0 1789180.0 1650540.0 1699570.0 1726550.0 1714970.0 1829710.0 1761750.0 2024820.0 1701560.0 True False 1818688.6766109115 1703225.1071860688 1756936.449357374 1861096.6218056474 1862419.662274297 1704266.2360941772 2014674.9430487584 1755638.9004455411 1657163.7295584232 1686485.5021936486 1.0783897485304814 1.0099257331122304 1.0417738231796765 1.1035354999404847 1.104319995548024 1.010543069523812 1.1945996217745285 1.041004442766892 0.9826136823606927 1.0 20.68558848566229 -7.5284645311978515 15.35458703470667 0.9981295970422707 1.0762480741945648 0.3137429963103706 0.050688094882292034 1.7889516482768661 4882.889490391641 0.033581546769067744 0.013041609283191103 2.961661834247293e-08 7.5284645311978515 0.07811847715229414 S(ph)KSPSPPR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSPSPPR 8 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.948)KS(0.046)PS(0.005)PPR;S(0.479)KS(0.376)PS(0.145)PPR 62.303000000000004 0.021063 1493860000.0 566870.0 451680.0 470480.0 519970.0 454420.0 449030.0 428880.0 441680.0 535910.0 456100.0 True False 535424.5910726705 429980.61481449805 500807.8935946156 569387.7924653193 490180.26870388194 446227.4372107789 472235.37586543866 440147.91516888654 438602.2531917178 452059.30884043034 1.1844122675984243 0.9511597403390144 1.1078367015142978 1.2595422355660504 1.0843273418287416 0.9870993218907256 1.0446314601434967 0.9736508165220676 0.9702316590200719 1.0 18.786152536804742 -6.165647833499012 4.632968735432015 0.9966933193791491 1.118076875558995 0.40390591609833126 0.07507353110950649 0.26579664126441954 9.587088320073471 0.026591584879552925 0.026547405272664897 6.82892222437125e-07 6.165647833499012 0.12138355617984586 S(ph)KSPT(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSPTLR 7 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 S(0.988)KS(0.055)PT(0.957)LR;S(0.998)KS(0.385)PT(0.617)LR 95.618 0.0052493 6283500000.0 6031700.0 5290700.0 4885500.0 5140200.0 5287600.0 5332400.0 5206900.0 5112300.0 6160900.0 5163800.0 True False 5697109.577104156 5036526.830497397 5200427.147076384 5628723.062542512 5703704.037671412 5299118.513646656 5733264.266446919 5094566.624519788 5042235.863650341 5118052.749375605 1.1131400663659035 0.9840709107798559 1.0160948707906203 1.099778243440185 1.114428536979666 1.035377862077162 1.1202042157823342 0.9954111209856752 0.9851863805556685 1.0 22.287163585961093 -7.368278977556123 9.162808974599534 0.9920300936990744 1.0653121701592925 0.38533123492382615 0.04351290713713624 0.4188463338567335 33.08244444237819 0.024757391378175873 0.011849625947965072 4.2827332227100515e-08 7.368278977556123 0.07328207646021812 S(ph)KSPTISDK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPTISDK 9 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 S(0.72)KS(0.183)PT(0.098)ISDK 78.488 0.02837 152990000.0 758900.0 661590.0 660620.0 649960.0 696790.0 725310.0 651950.0 698180.0 809970.0 686540.0 True False 716802.3041703573 629806.2233331642 703204.622229373 711732.002982401 751623.4088072216 720783.0712499166 717855.468418841 695758.1765364379 662899.865682103 680457.7897200368 1.0534118574280322 0.9255625151889109 1.0334287193900669 1.0459605485231223 1.1045849135130994 1.0592619882365826 1.0549595864193 1.022485431201686 0.9741968946447689 1.0 19.376146145423522 -3.918951093490211 22.11808572170122 1.0282640414783153 2.6136428890434242 0.027439548152899285 0.04705459472000683 8779.025022538352 1984760.623741273 0.012152317546790909 119678.46052064309 0.00012051716487975782 3.918951093490211 1.585378847565109 S(ph)KSPVGNPQLIQFSR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPVGNPQLIQFSR 15 1 G8JLP4;Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3 G8JLP4 KIAA0430 Meiosis arrest female protein 1 1 S(0.575)KS(0.425)PVGNPQLIQFSR 71.07300000000001 0.013356 1324300000.0 191140.0 166770.0 167620.0 198450.0 181670.0 175890.0 166580.0 179700.0 210520.0 157900.0 True False 180537.0831718564 158758.11887312672 178425.05340148247 217310.62833383205 195966.3954390963 174792.2052669174 183419.53206413172 179076.66264229536 172294.87477733276 156501.128844341 1.1535832648940316 1.0144215575021862 1.14008796434272 1.3885562994882505 1.2521724085070862 1.1168750446571478 1.1720013358278347 1.1442515716318469 1.1009177764378972 1.0 17.255813537807224 -8.069514614916656 1.077044096539815 1.0004271524232098 1.1801191706866894 0.26799854510636933 0.09068041418161099 0.933114752243703 2.3909213228416504 0.09665568744318973 0.03128381431208386 8.520898362935433e-09 8.069514614916656 0.17969201826347958 S(ph)KSQEEPKDTFEHDPSESIDEFNK ddPTM_KYSE-520_SHP099_60min_R1 5 SKSQEEPKDTFEHDPSESIDEFNK 24 2 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.5)KS(0.5)QEEPKDTFEHDPSESIDEFNK;S(0.489)KS(0.489)QEEPKDT(0.021)FEHDPSESIDEFNK;S(0.602)KS(0.398)QEEPKDTFEHDPSESIDEFNK;S(0.891)KS(0.109)QEEPKDTFEHDPSESIDEFNK;S(0.489)KS(0.489)QEEPKDT(0.02)FEHDPS(0.001)ESIDEFNK 178.63 4.4177e-11 5552820000.0 2188860.0 2046180.0 1982110.0 2402070.0 1949340.0 1935570.0 2059120.0 2022200.0 2474330.0 1809170.0 True False 2067439.5724157672 1947878.4414212024 2109879.982088129 2630362.0105913184 2102741.9677725993 1923489.3896667655 2267275.9446746004 2015185.4601850286 2025054.0447833855 1793142.1613129613 1.1529702535698352 1.0862933700666217 1.1766384325843124 1.466900989414768 1.1726577028521517 1.0726920771626731 1.2644150550865818 1.1238291662884579 1.1293326811860893 1.0 20.77405843973401 -8.143787871237679 0.8705534241346412 1.000114804214987 1.201365801563171 0.24480115667797941 0.10510214862373289 1.2147966680711777 1.9841758073989257 0.10816246817549928 0.03775348077343352 7.1814497960259234e-09 8.143787871237679 0.20125099734818397 S(ph)KSSDPDLRR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSSDPDLRR 10 2 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 1 S(0.523)KS(0.456)S(0.021)DPDLRR;S(0.457)KS(0.457)S(0.087)DPDLRR 108.59 0.00062876 2101730000.0 1997520.0 2207900.0 2321700.0 1988830.0 2167000.0 2061980.0 2013460.0 2169200.0 2803100.0 2187800.0 True False 1886713.5836426036 2101829.1698745354 2471360.49685134 2177847.8052364583 2337530.5714566037 2049110.4179673528 2217000.186275942 2161675.5514950836 2294127.700400633 2168417.7940826467 0.8700876688944444 0.9692916077382211 1.1397067961697176 1.0043487980865795 1.0779890193833706 0.9449795254213144 1.0224045349221311 0.9968907086973913 1.0579731021674115 1.0 21.048211320195318 -4.414082640240852 4.049871815250019 1.0291877564343541 0.8753616931775553 0.48330530506709757 0.05064409800292146 0.1915835710115272 5.0379227020325805 0.012563970676425324 0.0603280492383535 3.8540501343746696e-05 4.414082640240852 -0.15382606325679882 S(ph)KSVIEQVSWDT ddPTM_KYSE-520_SHP099_60min_R1 1 SKSVIEQVSWDT 12 1 Q6WCQ1;H0Y7E2 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.595)KS(0.405)VIEQVSWDT 73.02199999999999 0.031094 508650000.0 823720.0 1007200.0 906880.0 854640.0 988550.0 948410.0 989570.0 1023700.0 1274200.0 1169900.0 True False 778026.6095548901 958812.6001619785 965338.935859304 935864.7286431134 1066343.2609199022 942490.6213951721 1089605.3928725098 1020149.023633376 1042837.3999680659 1159535.596168428 0.6709812205212181 0.82689363166623 0.8325220364507758 0.8071030606870431 0.9196296038202961 0.8128173248924313 0.9396911974699218 0.8797910361737568 0.8993578148131202 1.0 20.145115678766825 -1.3391135465736799 0.18271673176735131 0.979628680541155 4.585923640866769e-24 0.7069689702693563 0.04657835038114375 28.530438046884967 0.3615700485546655 0.10040697835330342 7.600917342890252 0.04580221208785245 1.3391135465736799 -0.979628680541155 S(ph)KSY(ph)S(ph)PGRR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSYSPGRR 9 2 J3QK89;Q8IWX8 J3QK89 CHERP Calcium homeostasis endoplasmic reticulum protein 3 S(0.844)KS(0.39)Y(0.808)S(0.958)PGRR 52.725 0.044849 674420000.0 1020500.0 829870.0 753900.0 840990.0 799730.0 877740.0 801400.0 892980.0 948940.0 855870.0 True False 963890.8306836862 790001.7995397347 802497.6002826485 920917.4367471364 862664.2011587407 872261.6990788786 882413.3329102839 889882.4608030984 776636.4168307156 848287.6576567846 1.1362782683249582 0.9312899844870404 0.9460206016663952 1.085619280717789 1.01694772212255 1.028261688362079 1.0402288951695517 1.0490338422006642 0.9155342646102026 1.0 19.694194045714102 -7.751800890588806 24.99564013179848 0.9577671211614318 1.0249803021923203 0.1842180300699271 0.05960742826432721 313.4444382512137 812875.1127657027 0.040885512679171475 0.015008034977442937 1.770920679791323e-08 7.751800890588806 0.06721318103088847 S(ph)KTFDWAEFRPIQQALAQER ddPTM_KYSE-520_SHP099_60min_R1 1 SKTFDWAEFRPIQQALAQER 20 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.5)KT(0.5)FDWAEFRPIQQALAQER 125.83 2.3452e-05 15093000000.0 153820.0 158170.0 153980.0 189830.0 206330.0 139230.0 162630.0 169860.0 184820.0 116460.0 True False 145287.2979674322 150571.27578198962 163905.79717671085 207871.38612552945 222566.9971428897 138361.0139252537 179070.22751584655 169270.7953056222 151261.34693305474 115428.25500450905 1.2586805367694138 1.3044576977803897 1.4199798582271568 1.8008709056323275 1.9281847164214294 1.1986754362686054 1.5513552336804486 1.4664589298262358 1.3104360533488608 1.0 16.816636890494447 -8.125594857795258 1.589604263069264 0.9998540876023229 1.5046389664569013 0.32655323954136706 0.21701755309059914 0.7141467102019203 3.754896949050046 0.2239161740318809 0.06486404673140567 7.488677743361739e-09 8.125594857795258 0.5047848788545785 S(ph)KTFNPGAGLPTDKK ddPTM_KYSE-520_SHP099_60min_R1 2 SKTFNPGAGLPTDKK 15 2 P09661;H0YLR3;H0YMA0 P09661 SNRPA1 U2 small nuclear ribonucleoprotein A 1 S(0.804)KT(0.196)FNPGAGLPTDKK;S(0.972)KT(0.028)FNPGAGLPTDKK 111.65 0.00014642 2126400000.0 1787640.0 1716680.0 1767350.0 1731480.0 1663580.0 1637590.0 1575020.0 1586620.0 2100950.0 1641680.0 True False 1688476.0456280082 1634208.1160107867 1881276.2088599834 1896039.338611554 1794494.2815245881 1627369.1933768305 1734238.3923138976 1581116.3855398912 1719470.4406395485 1627135.9924077126 1.037698172437037 1.0043463629567984 1.1561886760775375 1.1652617528335407 1.1028545185514773 1.0001433199008603 1.0658226481412307 0.9717174181613886 1.0567466079434493 1.0 20.63390340261684 -6.2554056674123135 24.70458550808742 1.0200518774637282 1.0958247388681508 0.3394709150974927 0.05180524006380138 535.3171248873256 2191817.18671257 0.018805038251083993 0.018354541534497018 5.553852385859372e-07 6.2554056674123135 0.07577286140442263 S(ph)KTPPKS(ph)YSTAR ddPTM_KYSE-520_SHP099_60min_R1 1 SKTPPKSYSTAR 12 2 Q5T757;Q05519-2;Q05519;Q5T760 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 2 S(0.989)KT(0.083)PPKS(0.42)Y(0.028)S(0.42)T(0.059)AR 52.522 0.056291999999999995 6878700000.0 814930.0 825340.0 749100.0 777400.0 770100.0 698910.0 693000.0 737610.0 948900.0 630380.0 True False 769724.2083773199 785689.4275394024 797388.1846023772 851283.8622661667 830702.4887303804 694547.8434424998 763055.2030282335 735051.403069468 776603.6798223979 624795.3236282188 1.2319621790820896 1.2575148978018325 1.276239040926079 1.3625003742389064 1.3295593889955002 1.111640592008955 1.2212882750100182 1.1764675170758103 1.242972939222112 1.0 19.253024129895536 -6.256618363076772 24.996136615865343 1.1659289843156093 1.2927545551936526 0.4876369744497482 0.07142865703911506 403.0237132055974 2089611.685945096 0.023640964220741398 0.022942328751808606 5.538365801611312e-07 6.256618363076772 0.12682557087804325 S(ph)KTPPPPPQTAQTK ddPTM_KYSE-520_SHP099_60min_R1 4 SKTPPPPPQTAQTK 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.518)KT(0.482)PPPPPQTAQTK;S(0.5)KT(0.5)PPPPPQTAQTK;S(0.638)KT(0.362)PPPPPQTAQTK;S(0.5)KT(0.5)PPPPPQTAQTK 156.73 4.2678000000000007e-07 3186280000.0 4566630.0 5307280.0 4021800.0 3457090.0 3710350.0 5354510.0 3776940.0 5001890.0 5628900.0 5252100.0 True False 4313309.93054879 5052310.302410307 4281051.663107524 3785650.794187991 4002333.435996317 5321090.516935363 4158749.954582191 4984539.611039897 4606833.6530217 5205570.480071965 0.8285950496801573 0.9705584280823072 0.8223981750888406 0.7272307249859109 0.7688558730148989 1.0221916190176723 0.7989037840334261 0.9575395492428312 0.8849815156009592 1.0 22.311624846906717 -6.2445299681421185 24.97729284346449 0.9217058057933731 0.8262834521277742 0.30050859305338307 0.08239267840716172 1268.79145320574 1874162.7567050538 0.028225236493723112 0.028153316722968762 5.694689270259131e-07 6.2445299681421185 -0.09542235366559892 S(ph)KTPSSPCPASK ddPTM_KYSE-520_SHP099_60min_R1 1 SKTPSSPCPASK 12 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 S(0.498)KT(0.498)PS(0.004)SPCPASK 86.641 0.0034592 0.0 158120.0 147980.0 127550.0 129650.0 126020.0 133720.0 131960.0 156240.0 191300.0 174090.0 True False 149348.76839559447 140870.8186774916 135772.07708721567 141971.89701930629 135937.0570442832 132885.4038790846 145299.80460549175 155698.03990668998 156564.7422805613 172547.6980399706 0.8655506279834454 0.8164166794323674 0.7868669279828012 0.8227979777882551 0.787823069148065 0.770137216483188 0.8420848626553865 0.9023478242556595 0.9073707969392507 1.0 17.396635701334137 -7.702760923552214 1.1136361515876578 0.9921320354856389 0.807221384381136 0.820830025120345 0.028373843382325258 0.18925868314915834 0.4704589387557047 0.027821823174115967 0.009374586632621952 1.9826181445751965e-08 7.702760923552214 -0.1849106511045029 S(ph)KTPVQAAAVSIVEKPVTR ddPTM_KYSE-520_SHP099_60min_R1 2 SKTPVQAAAVSIVEKPVTR 19 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 S(0.5)KT(0.5)PVQAAAVSIVEKPVTR;S(0.615)KT(0.385)PVQAAAVSIVEKPVTR 153.1 6.92e-07 1551000000.0 654460.0 620440.0 519890.0 411600.0 447690.0 533140.0 446740.0 599380.0 683900.0 617830.0 True False 618155.7991663347 590633.1311005738 553402.9412534109 450718.3402479479 482920.6559923435 529812.4755017586 491900.83896224113 597300.8906763431 559720.9997160264 612356.5068644659 1.0094704510148242 0.9645249531598427 0.9037267262612704 0.7360391131561966 0.7886266424523016 0.8652026549283048 0.8032916012944639 0.9754136421849845 0.9140443409053389 1.0 19.224012292285558 -9.605557897707351 10.352289588958826 1.0000010859277282 0.8799366385149985 0.1446552361950596 0.08361514133918756 0.0 0.0 0.08901690275452273 0.021589770148366643 2.4799453032394404e-10 9.605557897707351 -0.1200644474127297 S(ph)KTSLNPNDLGPLPPGWEER ddPTM_KYSE-520_SHP099_60min_R1 1 SKTSLNPNDLGPLPPGWEER 20 1 A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5;Q96PU5-3;K7ERN1 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 S(0.643)KT(0.178)S(0.178)LNPNDLGPLPPGWEER 109.71 6.8969e-05 331390000.0 279200.0 250730.0 222290.0 241470.0 299310.0 299020.0 345360.0 398300.0 418290.0 417710.0 True False 263712.2194285986 238684.55444659712 236619.16907657502 264419.2361993971 322863.9941590572 297153.7052641627 380272.3591887892 396918.39026391885 342339.08023280714 414009.41437346255 0.636971552513329 0.5765196301340352 0.5715308900273693 0.6386792836572415 0.7798469864451284 0.7177462515287426 0.9185113815932688 0.9587182718165763 0.8268871874589686 1.0 18.659304048720546 -6.305272507797565 0.8299491328583342 0.9450735893485938 0.5825733000182834 0.8490972940662213 0.05863637341480226 0.22173534608292117 0.32905775748400257 0.03885020540856563 0.035110271258784 4.951394070025764e-07 6.305272507797565 -0.3625002893303103 S(ph)LAALSQIAYQR ddPTM_KYSE-520_SHP099_60min_R1 1 SLAALSQIAYQR 12 0 E7EX44;Q05682-3;Q05682-5;E9PGZ1 E7EX44;Q05682-5 CALD1 Caldesmon 1 S(1)LAALSQIAYQR 55.261 0.060138 36838000.0 24744.0 24559.0 27482.0 23916.0 21136.0 19530.0 23035.0 22410.0 31413.0 21055.0 True False 23371.400994058917 23379.148776189457 29253.5336927547 26188.969449392393 22799.282952610458 19408.10602571434 25363.60259993561 22332.264940533318 25709.191057288393 20868.46908054214 1.1199384537436203 1.120309721137536 1.4018054501195218 1.254954033681901 1.0925230243108066 0.930020594745522 1.2154031281376914 1.0701439024751473 1.2319634448537369 1.0 14.34903714722872 -5.768262176819898 24.49798425779563 1.0917864643870308 1.2295098730371508 0.257628525532836 0.11147031296989911 179.67292597645945 645133.7530874951 0.035324065068333035 0.04097035890656929 1.7050527644316907e-06 5.768262176819898 0.13772340865012 S(ph)LAIPDDDRFEDLEEANPFSFR ddPTM_KYSE-520_SHP099_60min_R1 2 SLAIPDDDRFEDLEEANPFSFR 22 1 Q96C92-4 Q96C92-4 SDCCAG3 Serologically defined colon cancer antigen 3 1 S(1)LAIPDDDRFEDLEEANPFSFR;S(1)LAIPDDDRFEDLEEANPFSFR 146.57 4.860899999999999e-07 135775000.0 58200.0 63256.0 54849.0 62274.0 58839.0 59660.0 69630.0 67386.0 62779.0 65739.0 True False 54971.52998117636 60217.08681080827 58384.65430150294 68192.50223663921 63469.29455188522 59287.63981024666 76668.8799233131 67152.2536940106 51379.916129803205 65156.60360416809 0.8436831716265182 0.9241900817395609 0.8960665699549761 1.046593874826786 0.9741037905761107 0.9099252651415675 1.1766862556109134 1.0306285162125124 0.7885603804940565 1.0 15.99162378250541 -5.221573282129295 13.442703055214292 0.9946148530218977 0.8915768664697578 0.19121282232089842 0.09518763233233715 4.620871913337499 1554.9914223047956 0.026233227163842174 0.045393760459196075 6.003806931192344e-06 5.221573282129295 -0.10303798655213992 S(ph)LAQFISDQNIK ddPTM_KYSE-520_SHP099_60min_R1 1 SLAQFISDQNIK 12 0 C9K0D8;Q66S35;Q16877-2;Q16877-3;Q16877 C9K0D8 PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4;6-phosphofructo-2-kinase;Fructose-2,6-bisphosphatase 1 S(1)LAQFISDQNIK 78.692 0.014957 12606000.0 25481.0 38736.0 41278.0 38010.0 42383.0 30764.0 37702.0 40499.0 42252.0 36261.0 True False 24067.518134885824 36875.06441607864 43938.84592713515 41622.45897187677 45718.30097371727 30571.990464673618 41513.286096061325 40358.518421537636 34580.10188624296 35939.75575063112 0.6696628185755877 1.0260243467411738 1.2225694084290921 1.1581174691524123 1.2720815714757447 0.8506454711823342 1.1550798058868925 1.122949156960504 0.9621685279715825 1.0 15.133292983763175 -4.286459520948896 3.6928855689703957 1.1008360342093988 0.6336828356630908 0.5247842903587399 0.11979235000079626 0.18556738301948075 4.747009057797088 0.03010722268382882 0.2280705484901091 5.1705944900343245e-05 4.286459520948896 -0.467153198546308 S(ph)LARHYDR ddPTM_KYSE-520_SHP099_60min_R1 1 SLARHYDR 8 1 Q8N1G0;F8WCX2;Q8N1G0-2;H0Y5I5 Q8N1G0 ZNF687 Zinc finger protein 687 1 S(1)LARHYDR 87.30799999999999 0.0065961 0.0 443510.0 294720.0 216390.0 163880.0 227690.0 231090.0 179640.0 297130.0 251810.0 298350.0 True False 418907.61618473416 280561.20881626115 230338.8456362414 179455.1059276814 245607.9076211145 229647.68159151677 197799.76431744863 296099.3253806636 206087.65161352934 295706.8511127874 1.4166314192867855 0.9487815644462378 0.7789432161258463 0.6068682725894448 0.8305790234377616 0.7766058876462264 0.6689049089430958 1.001327241037532 0.6969322855997143 1.0 18.173808143501887 -4.285871787479624 2.412731572966443 0.7851013636099834 1.542712367695086 0.7007373547692295 0.12199213962781454 0.26470682153925285 1.970197186624646 0.03069650297332592 0.4082095659400162 5.177596625209945e-05 4.285871787479624 0.7576110040851026 S(ph)LASIEAK ddPTM_KYSE-520_SHP099_60min_R1 1 SLASIEAK 8 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7 P28290-3 SSFA2 Sperm-specific antigen 2 1 S(0.609)LAS(0.391)IEAK 140.16 0.00062556 1805900000.0 4908700.0 4495500.0 4062900.0 3782200.0 3599000.0 4605900.0 4268600.0 4626100.0 5017200.0 4276600.0 True False 4636404.62574915 4279529.432116928 4324801.034869847 4141659.150840103 3882220.8244911563 4577152.869628141 4700111.745521392 4610053.138839861 4106202.9533195617 4238712.651144458 1.0938237638018031 1.0096295230018597 1.020310030617939 0.9771030715474072 0.9158962034010377 1.0798450488009144 1.1088535912554383 1.0876069029107553 0.9687382210754205 1.0 22.01519473651447 S(ph)LDDKPYK ddPTM_KYSE-520_SHP099_60min_R1 4 SLDDKPYK 8 1 P17026 P17026 ZNF22 Zinc finger protein 22 1 S(1)LDDKPYK;S(1)LDDKPYK;S(1)LDDKPYK;S(1)LDDKPYK 117.25 0.00064852 6592900000.0 8944400.0 9576200.0 9846700.0 10911800.0 11044800.0 13195400.0 16091800.0 17403200.0 19003400.0 15045400.0 True False 8448236.301780656 9116144.97783076 10481434.037277054 11948854.191247702 11913962.923684308 13113042.61401489 17718516.184833683 17342832.36113743 15552861.596729858 14912109.461144075 0.566535292930481 0.6113249773001169 0.7028807067563536 0.801285305904063 0.7989455116815012 0.8793553083943659 1.1881964943324859 1.1630032897979323 1.04296857780285 1.0 23.82998101934253 -6.037532382650083 0.872523404877439 1.1166211527503958 0.6056902559488019 0.8570966339092807 0.0784265607276343 0.21506227236857475 0.3595192773624167 0.04773791582894963 0.056580523091878526 9.172075423534984e-07 6.037532382650083 -0.5109308968015939 S(ph)LDDLSAPPHHR ddPTM_KYSE-520_SHP099_60min_R1 2 SLDDLSAPPHHR 12 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(0.999)LDDLS(0.001)APPHHR;S(0.998)LDDLS(0.002)APPHHR 110.08 0.00012268 1981350000.0 1223680.0 1248920.0 1195610.0 1320900.0 1213230.0 1226090.0 1136810.0 1185000.0 1468510.0 1212160.0 True False 1155800.031054396 1188920.008532862 1272680.9336436377 1446437.9388569347 1308704.298665575 1218437.5175150076 1251729.8489964306 1180889.5115810793 1201865.6021245536 1201421.2054462105 0.9620273271480415 0.9895946593445506 1.0593128603643727 1.203939078401504 1.0892968200769515 1.0141634857048134 1.0418742763338653 0.9829104948605384 1.0003698924876043 1.0 20.196310602528012 -6.848826172919972 1.7968726363158882 0.995753671257186 1.0617796825542771 0.14992602144791556 0.061904959938026055 0.7512668243007201 4.918020761647053 0.039423168963805905 0.022762527780786346 1.4163605671651735e-07 6.848826172919972 0.06602601129709118 S(ph)LDEADSENKEEVSPLGSK ddPTM_KYSE-520_SHP099_60min_R1 1 SLDEADSENKEEVSPLGSK 19 1 Q6ZV73-2;Q6ZV73;F8VQX5 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 S(1)LDEADSENKEEVSPLGSK 111.65 3.0908e-05 826380000.0 531390.0 410790.0 462060.0 378090.0 467940.0 449870.0 413850.0 440160.0 510570.0 459780.0 True False 501912.7374002973 391055.03179163917 491845.1269221396 414023.5599230963 504764.2157856044 447062.1944591964 455685.99678677483 438633.1876941159 417863.3584223013 455706.7069034276 1.1013942296589057 0.858128761037767 1.0793019270317001 0.9085307581633538 1.1076514963221133 0.9810305349619023 0.9999545538471586 0.9625339742631221 0.9169567884171036 1.0 18.797746078145014 -7.298843934228028 4.0305253565612205 0.9531678876730769 1.0018843770158903 0.06463506122576901 0.07773198808452318 0.6415863284427764 23.158957507827306 0.04156833325139376 0.019476120657156825 5.025231411421192e-08 7.298843934228028 0.04871648934281336 S(ph)LDEIAMDLTETGTQR ddPTM_KYSE-520_SHP099_60min_R1 2 SLDEIAMDLTETGTQR 16 0 E9PGA7;Q9Y2L6-2;Q9Y2L6;C9JYK2 E9PGA7 FRMD4B FERM domain-containing protein 4B 1 S(1)LDEIAMDLTETGTQR;S(1)LDEIAMDLTETGTQR 106.6 0.00043745 0.0 64694.0 72385.0 78851.0 67999.0 72541.0 62115.0 69692.0 73503.0 92631.0 64172.0 True False 61105.29485570832 68907.51594789991 83933.86162606078 74461.60451535511 78249.56399816972 61727.317244610655 76737.1474883748 73248.03524872911 75811.54543748392 63603.486005060535 0.9607224178065735 1.083392126375233 1.3196424739892822 1.1707157766388883 1.230271623664525 0.9705021080086615 1.2064927932137133 1.1516355446759823 1.1919400995010252 1.0 15.956818219027452 -10.72830495152684 2.4697956813161452 0.9687315157934534 1.1467234523937408 0.1390948823434277 0.1061881216875554 24058249.88265966 17328449.46882546 4620074.22683835 0.029284404747185553 1.869369051756392e-11 10.72830495152684 0.17799193660028745 S(ph)LDFFR ddPTM_KYSE-520_SHP099_60min_R1 4 SLDFFR 6 0 Q6P3S1 Q6P3S1 DENND1B DENN domain-containing protein 1B 1 S(1)LDFFR;S(1)LDFFR;S(1)LDFFR;S(1)LDFFR 108.46 0.0094175 136416000.0 404569.0 360044.0 303193.0 307287.0 324897.0 338518.0 293317.0 290874.0 350640.0 341874.0 True False 382126.7510816935 342746.9458029383 322737.30590595247 336491.4640907949 350464.5454889419 336405.183595124 322968.3448580559 289865.02598450176 286972.6149150861 338845.2623339472 1.1277323119397504 1.011514646662363 0.9524622055594226 0.9930534715848188 1.0342908237080304 0.9927988406211848 0.9531440476206396 0.8554495464623814 0.8469134640940079 1.0 18.370267074559166 -6.91795524338712 2.578669865976021 0.8893231568249818 1.016196432808099 0.4557355030871125 0.057665624795084455 0.24821977061122524 3.3305466553102105 0.029119838998783978 0.01741698447735661 1.2079383138742465e-07 6.91795524338712 0.12687327598311726 S(ph)LDGAPIGVMDQSLMK ddPTM_KYSE-520_SHP099_60min_R1 8 SLDGAPIGVMDQSLMK 16 0 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 S(1)LDGAPIGVMDQSLMK;S(1)LDGAPIGVMDQSLMK;S(1)LDGAPIGVMDQSLMK;S(1)LDGAPIGVMDQSLMK;S(1)LDGAPIGVMDQSLMK;S(1)LDGAPIGVMDQSLMK;S(1)LDGAPIGVMDQSLMK;S(1)LDGAPIGVMDQSLMK 366.88 7.632499999999999e-72 2982005000.0 2471571.0 2416978.0 2107824.0 2120981.0 2072609.0 2302157.0 2205460.0 2366452.0 2511610.0 2174206.0 True False 2334468.029675363 2300862.74892206 2243697.707677643 2322558.396543808 2235711.536767929 2287788.3842212195 2428409.4200153677 2358243.3303460497 2055564.9365357063 2154944.2263466693 1.083307865295913 1.0677133638965541 1.041185976066508 1.0777812103663114 1.037480000379493 1.061646216291994 1.1269012860403866 1.094340772960068 0.9538831267204334 1.0 21.039219099699178 -7.760891901301617 24.99998772909396 0.9769415372661576 1.0727926081716352 0.682234894610936 0.02643278595295911 8.56469255708122 391259.683682466 0.021943851436954286 0.007124604871258046 1.7342356064676284e-08 7.760891901301617 0.09585107090547762 S(ph)LDLDGLSK ddPTM_KYSE-520_SHP099_60min_R1 2 SLDLDGLSK 9 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 S(1)LDLDGLSK;S(1)LDLDGLSK 162.26 0.00013212 382890000.0 1143610.0 998400.0 866670.0 860050.0 904860.0 851950.0 931930.0 955430.0 1064760.0 898460.0 True False 1080171.6735699852 950435.3653710468 922536.9349210282 941788.8934165378 976067.3340508644 846632.6640351935 1026138.579160321 952115.8363290381 871426.4244153186 890500.3433913027 1.212994112339536 1.0673048836247416 1.0359759451722614 1.0575952052190258 1.096088666663166 0.9507381668275978 1.1523168820491025 1.0691919923389186 0.978580671958705 1.0 19.764256642090302 -4.2634934586485915 3.653606365021413 1.0481776673834338 1.2309003994010188 0.4563106410120761 0.05521628313632146 0.24608296560205298 6.092034302650932 0.013488013606335836 0.12235757098296839 5.451381065071789e-05 4.2634934586485915 0.18272273201758504 S(ph)LDLFNCEVTNLNDYR ddPTM_KYSE-520_SHP099_60min_R1 2 SLDLFNCEVTNLNDYR 16 0 P39687;H0YN26;Q92688;Q92688-2 P39687;Q92688 ANP32A;ANP32B Acidic leucine-rich nuclear phosphoprotein 32 family member A;Acidic leucine-rich nuclear phosphoprotein 32 family member B 1 S(1)LDLFNCEVTNLNDYR;S(1)LDLFNCEVTNLNDYR 102.58 0.00090052 0.0 30453.0 34087.0 24563.0 30590.0 28852.7 30453.0 20679.0 25412.0 39754.0 25727.0 True False 28763.711383449543 32449.409354369902 26146.37028218958 33497.26440278113 31123.24334059345 30262.931531033202 22769.43512759143 25323.8517032054 32535.67571678744 25499.07879530312 1.1280294325278826 1.2725718295496626 1.025384896924421 1.3136656689319797 1.220563440367355 1.1868245035035372 0.892951283078725 0.9931281010775183 1.2759549463716486 1.0 14.638157507360868 -6.583009507239658 20.866252131179625 1.0399250483308744 1.1949828352499836 0.28728607707790976 0.11623322144580958 20.760688610298327 7203.064535997907 0.043849368939380635 0.033965590813963005 2.6121041716045125e-07 6.583009507239658 0.1550577869191092 S(ph)LDLPSIGGSSVGK ddPTM_KYSE-520_SHP099_60min_R1 1 SLDLPSIGGSSVGK 14 0 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 S(1)LDLPSIGGSSVGK 138.21 6.5911e-06 870380000.0 872480.0 901430.0 629930.0 713080.0 687040.0 790900.0 658310.0 764090.0 917650.0 659020.0 True False 824081.7951542392 858123.9497259842 670536.2957236368 780850.9088046796 741106.1392771325 785963.6997305406 724858.3992864608 761439.5501299468 751027.8920740042 653181.5955098022 1.2616427052128603 1.3137601482115038 1.0265694874643387 1.1954576096027822 1.1346096466461306 1.2032851279545058 1.1097348796558109 1.1657394442285995 1.149799530845375 1.0 19.31712461554951 -6.24822059881122 0.021280037929913016 5.315661437190787e-11 2.326153556002539 0.40833893556988565 0.07035547981422419 593.1925281331164 4.954071971629031 254.65604292124306 285.8199172108745 5.646500893364947e-07 6.24822059881122 2.3261535559493822 S(ph)LDNFFAK ddPTM_KYSE-520_SHP099_60min_R1 6 SLDNFFAK 8 0 Q9UKY7-2;Q9UKY7 Q9UKY7-2 CDV3 Protein CDV3 homolog 1 S(1)LDNFFAK;S(1)LDNFFAK;S(1)LDNFFAK;S(1)LDNFFAK;S(1)LDNFFAK;S(1)LDNFFAK 152.54 0.00036743 1054072000.0 2085380.0 1552054.0 1413003.0 1490941.0 1507330.0 1504993.0 1402483.0 1549880.0 1585720.0 1452455.0 True False 1969699.8142980344 1477490.996159449 1504087.4342647374 1632639.5843722443 1625948.2954654768 1495599.7804381934 1544259.6685550478 1544503.8280247096 1297793.2207482061 1439587.3786928905 1.3682391520315167 1.0263295010970255 1.0448045436675135 1.134102457785258 1.1294543975106237 1.038908650196809 1.072709924671052 1.0728795284570225 0.9015036113518653 1.0 20.457223928201955 -4.258258408599086 24.91129463030274 1.0548417885783703 1.368239273763127 0.6970046047836769 0.06338904487800727 170.22476547432706 1333022.774868852 0.015950975487407697 0.11150377231330294 5.51749046612506e-05 4.258258408599086 0.31339748518475674 S(ph)LDQPFLSK ddPTM_KYSE-520_SHP099_60min_R1 3 SLDQPFLSK 9 0 G5E9Y3;Q8WWN8-2;Q8WWN8 G5E9Y3 ARAP3 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 1 S(1)LDQPFLSK;S(1)LDQPFLSK;S(1)LDQPFLSK 138.42 0.0004439 434390000.0 1220920.0 1225970.0 1100720.0 1157410.0 1229200.0 1028960.0 1035640.0 1094960.0 1219160.0 1313390.0 True False 1153193.1337563195 1167072.560981512 1171674.1724142707 1267409.8984119948 1325931.0468087036 1022537.8789666673 1140332.598072381 1091161.8393255854 997791.2765225772 1301754.386401958 0.8858761267121511 0.8965382203990833 0.9000731510133579 0.9736167679950046 1.0185723671525853 0.7855075347915335 0.8759967394650031 0.8382240541870196 0.7664973415457171 1.0 20.312025837377238 -6.272185915841555 24.98850106726393 0.8445561162630273 0.9330143379357468 0.2518715558652238 0.06955407805437035 969.0857454787616 2253370.963527267 0.024097673383990614 0.0214544331401498 5.343355682945738e-07 6.272185915841555 0.08845822167271955 S(ph)LDSESISPGDFHR ddPTM_KYSE-520_SHP099_60min_R1 2 SLDSESISPGDFHR 14 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 S(0.939)LDS(0.061)ES(0.001)ISPGDFHR;S(0.864)LDS(0.136)ES(0.001)ISPGDFHR 106.35 0.00037535 578790000.0 325640.0 389020.0 353340.0 495430.0 339520.0 333360.0 297370.0 277155.0 326180.0 312974.0 True False 307576.1000527536 370330.8952690757 376116.86176398885 542515.5182435388 366238.2923954532 331279.3765863863 327431.0616515235 276193.6139934635 266953.9343286642 310201.2938500873 0.9915371281507213 1.1938405887115595 1.2124928851707397 1.7489144274998518 1.1806472108799364 1.0679496931643537 1.0555438295810684 0.8903689941633226 0.8605829170321788 1.0 18.242845178306663 -6.528987404847569 1.849828717513646 0.9293098035788031 1.2842610092676423 0.3962752322305889 0.185670261633697 0.37543651912321735 2.588991317994733 0.09222302734191395 0.06950202552953624 2.958098254328538e-07 6.528987404847569 0.3549512056888392 S(ph)LDYLNLDK ddPTM_KYSE-520_SHP099_60min_R1 8 SLDYLNLDK 9 0 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 S(1)LDYLNLDK;S(1)LDYLNLDK;S(1)LDYLNLDK;S(0.985)LDY(0.015)LNLDK;S(1)LDYLNLDK;S(1)LDYLNLDK;S(1)LDYLNLDK;S(1)LDYLNLDK 192.95 4.1686e-06 3062456000.0 2470450.0 2498030.0 2592770.0 2632510.0 2820140.0 2663090.0 2745680.0 2984650.0 3858850.0 3109440.0 True False 2333409.213780021 2378020.8891805285 2759904.1027786755 2882702.9589070077 3042068.9735983545 2646468.6674869196 3023240.1296544913 2974296.945772547 3158180.113692335 3081892.7807077146 0.7571351048897247 0.7716105193751901 0.8955224270147715 0.9353676990167823 0.9870781334903497 0.8587153596171487 0.9809686270007892 0.9650877423093026 1.0247534026693499 1.0 21.55538524057597 -2.8211941836774943 0.3901611116229071 0.9922408341918446 6.81103918066329e-10 0.7782480667053502 0.04230343248905761 7.9610870797166555 0.3957045955465792 0.033476412321527906 4.653888385652783 0.0015094051113445177 2.8211941836774943 -0.9922408335107407 S(ph)LEAVPK ddPTM_KYSE-520_SHP099_60min_R1 2 SLEAVPK 7 0 Q9BYX2-2;Q9BYX2;Q9BYX2-3 Q9BYX2-2 TBC1D2 TBC1 domain family member 2A 1 S(1)LEAVPK;S(1)LEAVPK 105.52 0.0039479 915120000.0 2227800.0 2155000.0 2084810.0 1915010.0 2140100.0 2273600.0 2077920.0 2246700.0 2558800.0 2238400.0 True False 2104219.4929908025 2051470.5652790514 2219200.188413943 2097011.9746312487 2308513.6944966717 2259409.6190509 2287976.432144917 2238906.7220837204 2094186.4220987977 2218569.51744885 0.9484577681435291 0.9246816694921749 1.0002842691924383 0.9452090448996247 1.0405415184606202 1.0184083037654879 1.03128453453912 1.0091668097280342 0.9439354528349054 1.0 21.081198329111743 -5.093076559024469 1.2750793244607217 1.006765689396291 0.9360529251922166 0.3536052694701386 0.03176999582684518 0.5512216839251817 1.6400931408029915 0.010702446437520599 0.0344981023538724 8.070927404384359e-06 5.093076559024469 -0.07071276420407446 S(ph)LEDLRAPK ddPTM_KYSE-520_SHP099_60min_R1 7 SLEDLRAPK 9 1 Q8TEH3;Q8TEH3-7;Q8TEH3-6 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 S(1)LEDLRAPK;S(1)LEDLRAPK;S(1)LEDLRAPK;S(1)LEDLRAPK;S(1)LEDLRAPK;S(1)LEDLRAPK;S(1)LEDLRAPK 126.71 0.00042033 10051410000.0 15241100.0 14577700.0 14008770.0 11508840.0 12785480.0 11979020.0 10643920.0 11231190.0 16428600.0 11086190.0 True False 14395645.800620412 13877365.410426192 14911797.729024494 12602636.693341069 13791624.536569929 11904254.492788145 11719911.308248615 11192231.62326946 13445580.371303875 10987974.981525298 1.3101272823085803 1.2629593199619573 1.3571015363701264 1.1469480695515408 1.2551561647854645 1.0833892971911057 1.0666124857359034 1.0185891069180253 1.223663176691855 1.0 23.389422194875323 -5.9149720598371776 1.069701546747853 1.0727294220238026 1.30344555693857 0.6226871295903509 0.07368591593475737 0.32781739858337094 0.8029110043672594 0.033306207868598246 0.04265273998633929 1.2162642460060923e-06 5.9149720598371776 0.23071613491476728 S(ph)LEDVTAEYIHK ddPTM_KYSE-520_SHP099_60min_R1 3 SLEDVTAEYIHK 12 0 Q9P0K7-3;Q9P0K7;Q9P0K7-2;Q9P0K7-4 Q9P0K7-3 RAI14 Ankycorbin 1 S(1)LEDVTAEYIHK;S(1)LEDVTAEYIHK;S(1)LEDVTAEYIHK 283.82 1.1007999999999998e-29 1647000000.0 898130.0 832270.0 699950.0 632810.0 755580.0 835170.0 707240.0 780150.0 901870.0 799960.0 True False 848308.9385222332 792286.499937261 745069.8969595976 692952.0721387351 815039.8473378791 829957.3942394184 778734.721197242 777443.8417383793 738113.1422925767 792872.9767594624 1.0699178347449072 0.9992603142755623 0.9397090313315508 0.8739761505946232 1.0279576568103186 1.046772205090812 0.9821683220684294 0.9805402183283592 0.9309349213909476 1.0 19.596730230053602 -8.170939008970286 0.002103418603887926 3.191170808869724e-08 1.9579660063316175 0.007609250559769576 0.05513243378705222 422534.970243505 499.3816276722061 233250.05217218 231585.45541800602 6.74622763066734e-09 8.170939008970286 1.9579659744199094 S(ph)LEELLLDANQLR ddPTM_KYSE-520_SHP099_60min_R1 2 SLEELLLDANQLR 13 0 A0A0G2JNZ2;A0A669KB89;Q14160;A0A0G2JPP5;Q14160-3;Q5T0G3;Q9BTT6-2;Q9BTT6 A0A0G2JNZ2 SCRIB;LRRC1 Protein scribble homolog;Leucine-rich repeat-containing protein 1 1 S(1)LEELLLDANQLR;S(1)LEELLLDANQLR 152.99 4.5408e-06 45987000.0 36975.0 44047.0 37492.0 45530.0 41221.0 44962.0 39269.0 52771.0 70250.0 44803.0 True False 34923.923042164904 41930.91600410512 39908.79430932099 49857.15751090632 44464.85818459286 44681.37548019294 43238.693748507554 52587.94971784397 57494.37085838701 44406.08027620658 0.7864671419980666 0.94426069005177 0.898723644624511 1.1227551993059046 1.001323645501262 1.006199493453915 0.9737111107209224 1.1842511068472161 1.2947409566611383 1.0 15.438469609812977 -2.83023480514673 0.3478256589364895 1.128816069977797 4.799643849189525e-10 0.5007467750668942 0.09766850495761024 15.423772621365993 0.6820864813851103 0.09089545906016852 8.919448238377614 0.0014783089112982912 2.83023480514673 -1.1288160694978326 S(ph)LEGGGCPAR ddPTM_KYSE-520_SHP099_60min_R1 2 SLEGGGCPAR 10 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 S(1)LEGGGCPAR;S(1)LEGGGCPAR 107.03 0.002166 1485680000.0 2500000.0 2130400.0 2227100.0 2104470.0 2387000.0 2122710.0 2225100.0 2239300.0 2535000.0 2197500.0 True False 2361320.0163735542 2028052.3862044043 2370662.4294859897 2304478.1960680247 2574843.3198278355 2109461.3795107035 2450034.822883297 2231532.3909565466 2074707.9021496233 2178031.8596291295 1.0841531109538658 0.9311399083711001 1.0884424940825526 1.0580553199347718 1.1821880880412254 0.968517228150142 1.1248847495281744 1.0245637046542226 0.9525608603828688 1.0 21.054593626865117 -7.537060878527699 8.08018078895058 0.9798388371392234 1.0603573146539622 0.20211171827623708 0.06830159727133932 0.2718834882272234 105.05159942583185 0.043899410570222154 0.01712940700765549 2.9036156029352785e-08 7.537060878527699 0.08051847751473884 S(ph)LEGLNQELEEVFVK ddPTM_KYSE-520_SHP099_60min_R1 11 SLEGLNQELEEVFVK 15 0 D6RFX7;Q9C073;K7ENS5;D6RJ87 D6RFX7 FAM117A Protein FAM117A 1 S(1)LEGLNQELEEVFVK;S(1)LEGLNQELEEVFVK;S(1)LEGLNQELEEVFVK;S(1)LEGLNQELEEVFVK;S(1)LEGLNQELEEVFVK;S(1)LEGLNQELEEVFVK;S(1)LEGLNQELEEVFVK;S(1)LEGLNQELEEVFVK;S(1)LEGLNQELEEVFVK;S(1)LEGLNQELEEVFVK;S(1)LEGLNQELEEVFVK 305.33 1.6181999999999998e-34 1838651000.0 701713.0 684983.0 631642.0 574963.0 602515.0 651477.0 569243.0 657330.0 769457.0 616811.0 True False 662787.5810598151 652075.3884995559 672358.6539829335 629607.3106510707 649929.5026585953 647410.8903898763 626787.6377163072 655049.8756519748 629743.0052324818 611346.5344116965 1.0841438427349894 1.0666215506186734 1.0997995672453587 1.0298697632382046 1.063111453284065 1.058991674849167 1.0252575297894995 1.0714870188678414 1.0300917234093563 1.0 19.221630860629762 -6.643602058910623 0.0090781533238431 1.8144111375934728e-08 2.1034719501434878 0.5700507075393819 0.019076399958090757 1576.3633871190098 7.73929472537477 881.4663817267632 910.8370742016758 2.271945666831306e-07 6.643602058910623 2.103471931999376 S(ph)LEKPK ddPTM_KYSE-520_SHP099_60min_R1 3 SLEKPK 6 1 H0YME2;H0YK21;H0YK54;Q6FIF0-2;Q6FIF0 H0YME2 ZFAND6 AN1-type zinc finger protein 6 1 S(1)LEKPK;S(1)LEKPK;S(1)LEKPK 105.57 0.006786499999999999 3886290000.0 8760400.0 5908550.0 5216390.0 5809360.0 5721220.0 5805490.0 5869230.0 5549130.0 5876460.0 5864760.0 True False 8274443.148575554 5624694.389085635 5552646.845919101 6361479.827752229 6171447.464711113 5769255.783472833 6462549.046564792 5529881.363206673 4809442.997501454 5812802.789114242 1.4234859582835455 0.9676389502873067 0.9552443197140041 1.0943911325643982 1.0616990957044874 0.9925084322965574 1.1117784795086019 0.9513278815449576 0.8273879524191323 1.0 22.470802532428085 -4.25859148781218 24.64598380150951 1.0016524339111117 1.4234861458900625 0.7304830534898856 0.07786620964780523 118.9086656713799 1028982.131494559 0.02015677527241067 0.13545863837823346 5.513260486445229e-05 4.25859148781218 0.4218337119789508 S(ph)LELSSLAGPGEDPLSADSLGKPTR ddPTM_KYSE-520_SHP099_60min_R1 8 SLELSSLAGPGEDPLSADSLGKPTR 25 1 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 S(1)LELSSLAGPGEDPLSADSLGKPTR;S(1)LELSSLAGPGEDPLSADSLGKPTR;S(1)LELSSLAGPGEDPLSADSLGKPTR;S(1)LELSSLAGPGEDPLSADSLGKPTR;S(0.995)LELS(0.005)SLAGPGEDPLSADSLGKPTR;S(0.986)LELS(0.013)S(0.002)LAGPGEDPLSADSLGKPTR;S(1)LELSSLAGPGEDPLSADSLGKPTR;S(1)LELSSLAGPGEDPLSADSLGKPTR 315.93 3.0538999999999996e-61 23839770000.0 4518740.0 4024390.0 3814010.0 3490170.0 3802060.0 4149660.0 3508420.0 3986760.0 4649050.0 3864200.0 True False 4268076.484315135 3831052.263667458 4059867.1872317623 3821874.7074421216 4101260.4912377987 4123760.4327017823 3863085.332479533 3972930.8600767767 3804899.7130132946 3829966.194302111 1.1143901193344228 1.000283571527854 1.0600268987417378 0.9978873215977657 1.0708346453133961 1.0767093555125247 1.0086473708897727 1.0373279184519582 0.9934551690492444 1.0 21.868900227394004 S(ph)LELSVNLQR ddPTM_KYSE-520_SHP099_60min_R1 1 SLELSVNLQR 10 0 O60303;H3BNJ6 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 S(1)LELSVNLQR 58.676 0.043526 544040000.0 136220.0 98302.0 117120.0 109530.0 116840.0 126920.0 125810.0 136750.0 150320.0 130300.0 True False 128663.60505216227 93579.42436568988 124669.74259862566 119939.6982686047 126034.64327133821 126127.84520141651 138528.1025872758 136275.64616768985 123025.67725882881 129145.64337186591 0.9962674829199182 0.7246038032907887 0.965342224047371 0.9287165647798639 0.9759109171683803 0.9766325979595002 1.072650218547394 1.05520900751792 0.9526119042559177 1.0 16.97863945051512 -5.61265940046337 1.140370518886008 1.0199288820634553 0.8700065066796544 0.33280692493407826 0.07371455883390822 0.5059506429633078 1.3689551128101904 0.028693279480966352 0.05042748697265259 2.4397234443562528e-06 5.61265940046337 -0.14992237538380093 S(ph)LENETLNK ddPTM_KYSE-520_SHP099_60min_R1 1 SLENETLNK 9 0 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(1)LENETLNK 134.75 0.00059183 569430000.0 1666400.0 1410400.0 1393900.0 1452200.0 1532600.0 1512000.0 1591000.0 1600800.0 1480800.0 1639300.0 True False 1573961.4701139575 1342642.2669464385 1483753.0243188553 1590216.651380148 1653206.900698843 1502563.0471520787 1751833.8066636657 1595247.198429529 1211924.04793024 1624777.0773561 0.9687245666188056 0.826354757005335 0.9132040604199534 0.9787291275476449 1.0174976762898482 0.924781047254253 1.0781994841497378 0.9818252735479115 0.745901739272645 1.0 20.6318103604163 -5.129375103407781 4.847388464996691 0.9657047367846514 0.891661070385425 0.08276740350034584 0.08787822441836693 0.5041175998359892 17.62550961500528 0.024036180540534916 0.043123265260918704 7.423776637463467e-06 5.129375103407781 -0.07404366639922644 S(ph)LENETLNKEEDCHS(ph)PTSKPPKPDQPLK ddPTM_KYSE-520_SHP099_60min_R1 3 SLENETLNKEEDCHSPTSKPPKPDQPLK 28 3 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(1)LENETLNKEEDCHS(0.973)PT(0.023)S(0.004)KPPKPDQPLK;S(0.933)LENET(0.067)LNKEEDCHS(0.993)PT(0.003)S(0.004)KPPKPDQPLK;S(0.96)LENET(0.04)LNKEEDCHS(0.983)PT(0.009)S(0.008)KPPKPDQPLK 206.65 1.6391e-16 17457500000.0 7620420.0 7404030.0 6566590.0 8697450.0 6148140.0 7093960.0 7132770.0 7561440.0 7510950.0 6772280.0 True False 7197700.111669348 7048329.285124396 6989882.898315491 9524053.033016315 6631963.639868578 7049683.964269157 7853820.00072684 7535211.1294933595 6147150.815641304 6712282.867954106 1.07231775735089 1.050064400410574 1.0413570220180541 1.418899235979194 0.9880339923591437 1.0502662213366896 1.17006689903113 1.1226003548610997 0.9158062817926126 1.0 22.678372084207336 -7.753515940249691 24.65126859662641 0.9579031285831413 1.1153168678021297 0.23007334309217609 0.11435320725363182 196.3930000276793 611031.2283389643 0.08095081184140054 0.029347742515192548 1.763941019982785e-08 7.753515940249691 0.15741373921898838 S(ph)LENIYSEPEGQECGPSINPLPKPR ddPTM_KYSE-520_SHP099_60min_R1 1 SLENIYSEPEGQECGPSINPLPKPR 25 1 Q68D51-2;Q68D51-3;Q68D51 Q68D51-2 DENND2C DENN domain-containing protein 2C 1 S(1)LENIYSEPEGQECGPSINPLPKPR 199.59 1.0715e-15 274730000.0 92904.0 106400.0 103130.0 69095.0 92117.0 84358.0 64962.0 69945.0 113090.0 75166.0 True False 87750.42992046742 101288.384290344 109777.9248138343 75661.76802583078 99366.08382596585 83831.49043098863 71528.99292802335 69702.37712028566 92555.70676690375 74500.08771826305 1.1778567328982643 1.3595740272600247 1.473527457161949 1.015593005903038 1.3337713668437348 1.125253580210726 0.9601195799731741 0.9356012758519038 1.24235701730878 1.0 16.184954503790404 -6.46835280409495 4.308881626034933 1.0295266120570281 1.2727774356378374 0.4031818141466271 0.13675028826789407 0.22476000097356386 8.63319679113254 0.051131964852423696 0.043248445538952136 3.4013176750306903e-07 6.46835280409495 0.2432508235808093 S(ph)LENPT(ph)PPFTPK ddPTM_KYSE-520_SHP099_60min_R1 3 SLENPTPPFTPK 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 2 S(1)LENPT(1)PPFTPK;S(1)LENPT(1)PPFTPK;S(1)LENPT(0.999)PPFT(0.001)PK 148.7 7.7727e-05 1199950000.0 2427700.0 2143620.0 1907530.0 1953250.0 2144740.0 1842880.0 1793240.0 1901500.0 2230470.0 1792760.0 True False 2293030.6415000316 2040637.2775607826 2030492.4359559142 2138886.292733973 2313518.8360986817 1831377.902338375 1974518.1995358616 1894904.1403134346 1825472.8735730457 1776877.541146176 1.2904832147413552 1.148440019251112 1.1427306547226344 1.2037330897627774 1.302013663027304 1.0306719849455939 1.1112291949293238 1.0664235978193104 1.0273487234216059 1.0 20.760912826453914 -6.2782177509205646 24.93124534737963 1.0552920710808604 1.2087280958467597 0.6978582296584629 0.055765971242596094 521.2538977528761 774536.8543501256 0.020138198950382536 0.017807630433367624 5.269655798897189e-07 6.2782177509205646 0.15343602476589924 S(ph)LEQNIQLPAALLSR ddPTM_KYSE-520_SHP099_60min_R1 4 SLEQNIQLPAALLSR 15 0 P33993;P33993-3 P33993 MCM7 DNA replication licensing factor MCM7 1 S(1)LEQNIQLPAALLSR;S(1)LEQNIQLPAALLSR;S(1)LEQNIQLPAALLSR;S(1)LEQNIQLPAALLSR 260.44 5.807200000000001e-25 688070000.0 383725.0 326311.0 351523.0 301308.0 251854.0 336084.0 286829.0 328109.0 389577.0 321995.0 True False 362439.00931317685 310634.5297572035 374182.7350366862 329944.2217284464 271673.47694676125 333986.37509196997 315824.474501278 326970.86646021635 318839.6372369798 319142.3748083196 1.135665577254859 0.9733415374369322 1.1724633410446494 1.0338464828640024 0.8512610621197868 1.0465121571291365 0.9896036986343968 1.0245297781486982 0.9990514027743209 1.0 18.28384065267813 -5.521822206483222 24.997280952113123 0.9853921608485277 1.0853385702128242 0.3368404152742367 0.06807578737378317 46.434281810214905 1098644.8916670736 0.019406696747216907 0.025386805973676676 3.0073071962149713e-06 5.521822206483222 0.09994640936429655 S(ph)LEQYDQVLDGAHGASLTDLANLSEGVSLAER ddPTM_KYSE-520_SHP099_60min_R1 1 SLEQYDQVLDGAHGASLTDLANLSEGVSLAER 32 0 Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;M0R2S2;M0R3I1 Q9UBC2-3 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 S(0.806)LEQY(0.135)DQVLDGAHGAS(0.047)LT(0.012)DLANLSEGVSLAER 51.773999999999994 0.055725 37249000.0 26425.0 24186.0 21592.0 19180.0 18512.0 18859.0 17835.0 19799.0 28347.0 20323.0 True False 24959.152573068477 23024.068256073868 22983.85486842149 21002.86143332272 19968.78908112814 18741.29398560914 19637.935852826202 19730.321890121344 23199.899369718096 20142.95403105474 1.2391009051894035 1.143033351542046 1.1410369518287578 1.0426902330682106 0.9913535547140658 0.9304143750075268 0.9749282961451461 0.9795148149423746 1.151762513777791 1.0 14.297987654425278 -5.098332411694568 1.4375384901942068 0.9980156323706456 1.2090957571822831 0.6473234562032985 0.05729332794268498 0.2880592582997523 1.1179545765719685 0.019014329299239425 0.05548537484702862 7.973841308683186e-06 5.098332411694568 0.21108012481163752 S(ph)LESCLLDLR ddPTM_KYSE-520_SHP099_60min_R1 13 SLESCLLDLR 10 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 S(1)LESCLLDLR;S(1)LESCLLDLR;S(1)LESCLLDLR;S(1)LESCLLDLR;S(1)LESCLLDLR;S(1)LESCLLDLR;S(1)LESCLLDLR;S(1)LESCLLDLR;S(0.999)LES(0.001)CLLDLR;S(0.998)LES(0.002)CLLDLR;S(1)LESCLLDLR;S(1)LESCLLDLR;S(1)LESCLLDLR 199.82 8.9092e-11 18281120000.0 1782608.0 1628731.0 1614883.0 1448799.0 1602039.0 1652819.0 1461789.0 1515968.0 1813759.0 1566426.0 True False 1683723.1806990516 1550484.3179849274 1718980.9420841574 1586492.4213626983 1728110.3549449795 1642503.1435389207 1609560.8978058286 1510709.4608375898 1484426.08674359 1552548.6843009873 1.0844897797566482 0.9986703371450221 1.1071993809057936 1.0218632352111996 1.1130796556779385 1.0579398637527648 1.0367216912946664 0.9730512647452115 0.9561220860600139 1.0 20.566207078026526 -7.135140526640464 2.8510197029608193 0.9722698573496626 1.0627917960171598 0.5622406162774696 0.03442044190292971 0.1942032661682733 3.015146981253066 0.01824571305556909 0.00936642126803646 7.325874481316009e-08 7.135140526640464 0.09052193866749714 S(ph)LESINSR ddPTM_KYSE-520_SHP099_60min_R1 3 SLESINSR 8 0 E5RI99;P62888;E5RJH3;A0A0C4DH44 E5RI99 RPL30 60S ribosomal protein L30 1 S(1)LESINSR;S(1)LESINSR;S(1)LESINSR 123.51 0.00090197 1682210000.0 1221360.0 1098920.0 1114950.0 946750.0 1161010.0 1067180.0 1033380.0 1037010.0 1300760.0 1048860.0 True False 1153608.7260792027 1046126.2336874525 1186821.4609830754 1036728.835349232 1252374.8817567304 1060519.3337696786 1137844.1352169083 1033412.8543499535 1064574.7734911805 1039567.916400733 1.1097002012848858 1.006308695356265 1.1416487968310662 0.9972689797302222 1.2047071307209951 1.0201539668918267 1.0945356404961344 0.9940792112245151 1.024055048925546 1.0 19.98755258384926 -7.26205820427762 24.987517665417844 1.0068003445961136 1.080502223962445 0.24764655709283023 0.06065919844296073 79.4491377039917 3207909.3098440943 0.028559516588543363 0.015041398000083946 5.469426565618055e-08 7.26205820427762 0.07370187936633155 S(ph)LESIVK ddPTM_KYSE-520_SHP099_60min_R1 8 SLESIVK 7 0 Q5UIP0;Q5UIP0-2;H7BZN3 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(1)LESIVK;S(1)LESIVK;S(1)LESIVK;S(1)LESIVK;S(1)LESIVK;S(1)LESIVK;S(0.998)LES(0.002)IVK;S(0.99)LES(0.01)IVK 124.08 0.0023420000000000003 1533026000.0 4307290.0 3852146.0 3059892.0 3979389.0 3890529.0 3191362.0 2997542.0 4041353.0 5069520.0 3373348.0 True False 4068356.0373302572 3667083.123970972 3257137.5343203014 4357588.934113074 4196691.498218044 3171443.525982374 3300562.7985507376 4027334.489701884 4149022.9601994352 3343462.7611450315 1.2168091371046024 1.096791974651786 0.9741808917904123 1.3033161262489241 1.2551931329962855 0.948550575420871 0.9871690024208308 1.2045399567491064 1.2409358968839015 1.0 21.672911618268365 -6.240905794678975 24.97024240167284 1.0834559230101446 1.1618423617663198 0.12693775330749935 0.12045569123529334 2335.095549056004 2839637.6290357444 0.04315662654814216 0.043105518628346176 5.742410106283458e-07 6.240905794678975 0.07838643875617524 S(ph)LESLIYMSTR ddPTM_KYSE-520_SHP099_60min_R1 7 SLESLIYMSTR 11 0 O95171-3;O95171-2;O95171;F2Z2X8 O95171-3 SCEL Sciellin 1 S(0.995)LES(0.005)LIYMSTR;S(1)LESLIYMSTR;S(0.821)LES(0.179)LIYMSTR;S(0.61)LES(0.39)LIYMSTR;S(0.999)LES(0.001)LIYMSTR;S(1)LESLIYMSTR;S(0.999)LES(0.001)LIYMSTR 247.13 1.8338999999999998e-14 786654000.0 639633.3 461900.3 415353.0 437941.0 465075.8 453741.8 394282.5 432205.9 564799.0 443327.5 True False 604151.5657716286 439709.9162615151 442127.3189682972 479562.78096823714 501674.6195406725 450909.8291192257 434140.42292637815 430706.6786105154 462245.73902414454 439399.96325357625 1.37494678264908 1.0007054006232585 1.0062070003250023 1.0914037803218546 1.1417265851047824 1.0261945080295947 0.9880301757691253 0.9802155544604723 1.0519931217139953 1.0 18.745175223547374 -4.258017000850407 24.997814099467206 1.0341626834381095 1.3749469098639537 0.8194504573110527 0.04830575311577048 147.7061991804811 1078830.546253502 0.013331588359497201 0.09370720257095311 5.5205582813292104e-05 4.258017000850407 0.34078422642584427 S(ph)LESVLSLGPR ddPTM_KYSE-520_SHP099_60min_R1 2 SLESVLSLGPR 11 0 Q13470-2;Q13470 Q13470-2 TNK1 Non-receptor tyrosine-protein kinase TNK1 1 S(1)LESVLSLGPR;S(0.973)LES(0.027)VLSLGPR 280.56 9.7667e-22 618740000.0 76657.0 58242.9 57665.0 82198.0 83021.0 77822.0 82808.0 76868.0 72246.0 66784.1 True False 72404.68339805903 55444.82365962476 61382.178167262224 90010.07320627017 89554.2803751265 77336.28403139488 91179.04076819909 76601.36284912615 59127.94757345238 66192.44483124364 1.0938511726323656 0.8376306963880887 0.9273290678982307 1.3598239713875067 1.3529380974436493 1.1683551533496344 1.377484107146341 1.1572523577943048 0.8932733595835286 1.0 16.01437893757102 -5.240838158321894 24.224988963677013 1.2076421174080485 0.9414062822981734 0.3059692304903552 0.15916943987206772 612.0749183554678 719737.3948794191 0.043900891796602545 0.07590789476714237 5.743304490076672e-06 5.240838158321894 -0.26623583510987514 S(ph)LESVLSLGPRPT(ph)GGGSSPPEIR ddPTM_KYSE-520_SHP099_60min_R1 2 SLESVLSLGPRPTGGGSSPPEIR 23 1 Q13470-2;Q13470 Q13470-2 TNK1 Non-receptor tyrosine-protein kinase TNK1 2 S(0.992)LES(0.021)VLS(0.011)LGPRPT(0.713)GGGS(0.139)S(0.125)PPEIR;S(0.995)LES(0.044)VLS(0.012)LGPRPT(0.427)GGGS(0.281)S(0.241)PPEIR 80.418 0.0071023 3617000000.0 585120.0 554380.0 542410.0 545180.0 554070.0 525930.0 486200.0 477130.0 681930.0 542120.0 True False 552662.2271921985 527746.7526586549 577374.6164866845 596993.743285656 597672.1567729411 522647.4757861717 535349.8408547294 475474.9473929794 558108.7020563678 537317.2385629772 1.0285585265610695 0.98218838850226 1.074550703102023 1.1110638193598257 1.1123264132961368 0.9726981348745875 0.9963384801993149 0.8849054399680322 1.0386949496520828 1.0 19.03541459870996 -6.286650834620656 23.165350312126645 0.9724471456468732 1.0607703526020689 0.39728982556722636 0.05096315082545373 324.02322754309 297724.4889402361 0.018887877031613366 0.016667537784156156 5.1683172620016e-07 6.286650834620656 0.08832320695519569 S(ph)LESVLSLGPRPTGGGS(ph)SPPEIR ddPTM_KYSE-520_SHP099_60min_R1 2 SLESVLSLGPRPTGGGSSPPEIR 23 1 Q13470-2;Q13470 Q13470-2 TNK1 Non-receptor tyrosine-protein kinase TNK1 2 S(0.993)LES(0.39)VLS(0.023)LGPRPT(0.022)GGGS(0.475)S(0.097)PPEIR;S(1)LESVLSLGPRPT(0.009)GGGS(0.844)S(0.147)PPEIR 131.94 1.5963e-05 3674700000.0 1504700.0 1519850.0 1666720.0 1514250.0 1441250.0 1216320.0 1423030.0 1402000.0 1874080.0 1401560.0 True False 1421231.2914549166 1446834.1246586419 1774159.4380462894 1658163.8647241357 1554668.1754092455 1208728.4957090055 1566883.7598344418 1397136.78922926 1533794.3137122537 1389143.2687971804 1.0230991456234175 1.041529809888806 1.2771608788649162 1.1936593596712977 1.119156108898248 0.8701251504141896 1.1279497191036039 1.0057542807942343 1.1041296806198562 1.0 20.40576396815696 -6.026374949409955 24.965679098476308 1.024825645792041 1.1398658826621106 0.2557654283966172 0.09321163317777881 1058.5145764059364 1001953.9417905684 0.031643881962745306 0.03175109507996745 9.410767643185108e-07 6.026374949409955 0.11504023687006959 S(ph)LESVLSLGPRPTGGGSSPPEIR ddPTM_KYSE-520_SHP099_60min_R1 2 SLESVLSLGPRPTGGGSSPPEIR 23 1 Q13470-2;Q13470 Q13470-2 TNK1 Non-receptor tyrosine-protein kinase TNK1 1 S(0.998)LES(0.001)VLS(0.002)LGPRPTGGGSSPPEIR;S(0.999)LES(0.001)VLSLGPRPTGGGSSPPEIR 106.28 0.00051388 370170000.0 72065.0 68418.0 68770.0 72149.0 78284.0 82980.0 82741.0 69831.0 92363.0 88599.0 True False 68067.41079198415 65131.09658248837 73203.02423589045 79006.01926761208 84444.50542496951 82462.09104013197 91105.26775434217 69588.77255967788 75592.20748175365 87814.08178897903 0.7751309289500177 0.7416930776433005 0.8336137296498803 0.8996964684715021 0.9616282913245422 0.9390531604975598 1.0374790227069959 0.7924557330896274 0.8608210202938172 1.0 16.422164687170376 -5.096750155469843 2.243913392647779 0.9269886433889298 0.7577594607749525 0.5259533816033825 0.06527248629586287 0.2614801738113969 2.5679127751170254 0.02003588540337784 0.0449263762327785 8.002945226690427e-06 5.096750155469843 -0.16922918261397735 S(ph)LGANPDDLKDPIK ddPTM_KYSE-520_SHP099_60min_R1 3 SLGANPDDLKDPIK 14 1 A0A1B0GTU3;Q96L93-5;Q96L93-4;Q96L93;A0A0A0MRC9 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 S(1)LGANPDDLKDPIK;S(1)LGANPDDLKDPIK;S(1)LGANPDDLKDPIK 161.08 2.7027e-08 2524470000.0 3989500.0 2842660.0 2827740.0 2949820.0 2945300.0 3219040.0 3083930.0 3378810.0 3751300.0 3210600.0 True False 3768194.48212892 2706094.3466803506 3010020.6449439717 3230170.005904278 3177078.353535366 3198948.7773177433 3395683.7406563708 3367089.69673018 3070158.482577466 3182156.5818090052 1.1841637534966183 0.8503963513768952 0.9459058872686972 1.0150883285787207 0.9984041551246505 1.005276985929835 1.0671013991165634 1.0581156552692461 0.9648043405934883 1.0 21.601573396269508 -6.047953678725222 1.744077258190318 1.0261353261968449 0.9837723803849964 0.0023503103020654503 0.0822462683898326 1.3231665167025874 8.091837804372933 0.031535710313792945 0.03360789617511635 8.954602690637817e-07 6.047953678725222 -0.04236294581184852 S(ph)LGDEGLNR ddPTM_KYSE-520_SHP099_60min_R1 5 SLGDEGLNR 9 0 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 S(1)LGDEGLNR;S(1)LGDEGLNR;S(1)LGDEGLNR;S(1)LGDEGLNR;S(1)LGDEGLNR 110.84 0.0021747 2790600000.0 4798060.0 3974270.0 3830310.0 3730850.0 3998950.0 4020500.0 3958980.0 4614110.0 5132010.0 4520320.0 True False 4531902.047104521 3783340.1036991146 4077217.9113126826 4085428.862279045 4313644.614086944 3995406.5681712455 4359192.334321388 4598104.7293513715 4200166.351444137 4480273.481555742 1.0115235299276533 0.8444440097851744 0.9100377305308823 0.9118704202093506 0.9628083267338988 0.8917773847108703 0.9729746079714068 1.0263000123275317 0.9374799035673287 1.0 22.095155368223587 -6.898541973114337 5.965998347029343 0.988864742559812 0.9196204601869132 0.3074578616825425 0.045916668663455076 0.2393539557884579 11.97970306248571 0.01863878520610864 0.012476491818933002 1.2631590177984075e-07 6.898541973114337 -0.06924428237289881 S(ph)LGDLGPFPR ddPTM_KYSE-520_SHP099_60min_R1 5 SLGDLGPFPR 10 0 Q5SZD1 Q5SZD1 C6orf141 Uncharacterized protein C6orf141 1 S(1)LGDLGPFPR;S(1)LGDLGPFPR;S(1)LGDLGPFPR;S(1)LGDLGPFPR;S(1)LGDLGPFPR 175.25 2.9647e-05 1986680000.0 1463050.0 1255870.0 1295760.0 1221440.0 1223160.0 1221350.0 1199220.0 1260390.0 1457360.0 1355590.0 True False 1381891.6999821337 1195536.1201006991 1379286.7628893037 1337525.290360673 1319415.7331716039 1213727.101613221 1320448.8608593356 1256018.0012672385 1192740.1610559267 1343580.5272330628 1.0285142363799868 0.8898135213099264 1.0265754340231275 0.9954932088180382 0.9820146291408203 0.9033527034756459 0.9827835653279644 0.9348289706563786 0.8877325451509981 1.0 20.357651360908395 -6.1907591012929 17.07845387743717 0.9402320228025194 0.9821755913333706 0.16847551438009944 0.04728114818241735 13.463662351472783 3251.476578563288 0.015097168799138146 0.015097341302811821 6.445266787356889e-07 6.1907591012929 0.04194356853085124 S(ph)LGDLTADDFAPSFEGGSR ddPTM_KYSE-520_SHP099_60min_R1 2 SLGDLTADDFAPSFEGGSR 19 0 B9DI82;O75038-3;O75038 B9DI82 PLCH2 Phosphoinositide phospholipase C;1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 1 S(1)LGDLTADDFAPSFEGGSR;S(0.998)LGDLT(0.002)ADDFAPSFEGGSR 183.77 1.1462e-12 54393000.0 67042.0 106534.0 73563.0 47266.0 98353.0 67125.0 74607.0 89009.0 137767.0 73712.0 True False 63323.04661508641 101415.94672920584 78304.98868496165 51758.14642895889 106092.8215479794 66706.04797624558 82149.0036541523 88700.24855385668 112751.98562345066 73058.96902706825 0.8667388475140583 1.388138213278528 1.071805279047255 0.7084434275247241 1.4521532805735617 0.913043926906922 1.1244205160315937 1.2140911613602619 1.5433010775402018 1.0 16.156773774776475 -7.32721289057369 3.63034546449983 1.2968069706953 1.0799292253792008 0.09842366623553434 0.2444291321546295 0.5148918791174768 13.397922960938475 0.1418803534277934 0.06351378118977213 4.707465105194344e-08 7.32721289057369 -0.21687774531609927 S(ph)LGEISALTSK ddPTM_KYSE-520_SHP099_60min_R1 4 SLGEISALTSK 11 0 P18206-2;P18206 P18206-2 VCL Vinculin 1 S(1)LGEISALTSK;S(1)LGEISALTSK;S(1)LGEISALTSK;S(1)LGEISALTSK 199.4 3.8937e-07 594478000.0 1066830.0 845540.0 741140.0 772920.0 853170.0 965990.0 903020.0 1062890.0 1025320.0 975630.0 True False 1007650.8132271201 804918.9892185848 788915.0702659268 846378.0844131277 920309.6251267337 959960.8980942031 994306.0742259116 1059203.0826703897 839147.7342138273 966986.6772286532 1.0420524263219517 0.832399254481408 0.8158489551551291 0.8752737802332654 0.9517293741464007 0.9927343578770023 1.0282520924440808 1.0953647114415528 0.8677965829051467 1.0 19.883136487377232 -5.993186997703631 2.7016684550490586 1.0046193944619977 0.8819564615970646 0.2838975464553186 0.07766181816116083 0.3236301782726792 4.781765949448541 0.026770079181198083 0.029259402398642272 1.015811212605658e-06 5.993186997703631 -0.12266293286493302 S(ph)LGGAVGSVASGAR ddPTM_KYSE-520_SHP099_60min_R1 6 SLGGAVGSVASGAR 14 0 Q8NHG8 Q8NHG8 ZNRF2 E3 ubiquitin-protein ligase ZNRF2 1 S(1)LGGAVGSVASGAR;S(1)LGGAVGSVASGAR;S(1)LGGAVGSVASGAR;S(1)LGGAVGSVASGAR;S(1)LGGAVGSVASGAR;S(1)LGGAVGSVASGAR 197.01 5.7724e-11 5606370000.0 1351440.0 1255020.0 1076540.0 1046096.0 1110047.0 1206646.0 1018037.0 1407327.0 1433670.0 1259143.0 True False 1276472.9291711517 1194726.9553765755 1145935.490924902 1145516.6493197682 1197401.3835965348 1199114.8747313914 1120950.115043657 1402445.3111095903 1173351.6678796238 1247987.9726184313 1.0228247043863374 0.957322491554059 0.9182263900513314 0.9178907765563912 0.9594654835368648 0.9608384864603317 0.8982058638688373 1.1237650857861143 0.9401946922755903 1.0 20.25117259973639 -7.233708151259381 24.995616588495217 1.0239849956687137 0.9468487042175281 0.28918246219648935 0.05273807672805109 816.6692036926518 736107.8403140932 0.02360926491484388 0.013627123366517661 5.838373149802827e-08 7.233708151259381 -0.07713629145118561 S(ph)LGHPEPLSNGRPQGNSR ddPTM_KYSE-520_SHP099_60min_R1 1 SLGHPEPLSNGRPQGNSR 18 1 G3V5B1;H0YM52;G3V2G7;G3V3P0;G3V3Z0;G3V4P4;G3V499;G3V4M0;G3V519;G3V2B1;G3V449;P49768-4;P49768-3;P49768-5;P49768-6;P49768-7;P49768-2;P49768 G3V5B1 PSEN1 Presenilin-1;Presenilin-1 NTF subunit;Presenilin-1 CTF subunit;Presenilin-1 CTF12 1 S(0.984)LGHPEPLS(0.014)NGRPQGNS(0.001)R 76.492 0.0064339 517260000.0 48890.0 74705.0 83985.0 90493.0 68328.0 73632.0 58627.0 80228.0 100520.0 52814.0 True False 46177.97424020126 71116.05966550886 89398.80748075119 99093.42751228753 73705.02486686067 73172.4353755965 64553.58930438139 79949.70779335596 82268.10190299022 52346.10904867023 0.882166317218841 1.3585739409855038 1.7078405464220883 1.8930428510006865 1.4080325396932827 1.3978581542242694 1.2332070229777905 1.5273285683759328 1.571618280672957 1.0 15.675794683375825 -10.196306165272087 4.849070769800705 0.9999423650848336 1.4548496555416233 0.20747000185936593 0.25820656873375886 0.0001702047711361572 2.8210211289717374e-05 0.2644829443068914 0.06413843581114245 6.36346756357796e-11 10.196306165272087 0.4549072904567897 S(ph)LGHS(ph)EKQQELK ddPTM_KYSE-520_SHP099_60min_R1 1 SLGHSEKQQELK 12 1 A0A1B0GUS7 A0A1B0GUS7 2 S(1)LGHS(1)EKQQELK 73.435 0.060049 0.0 198610.0 239880.0 143990.0 121460.0 147070.0 181690.0 129750.0 177470.0 197960.0 188360.0 True False 187592.70738078063 228355.80473277916 153271.82579214562 133003.5218817194 158643.57228616672 180556.00531551655 142866.39623797036 176854.39799180927 162015.4541654987 186691.27694186245 1.0048284550498783 1.223173404100136 0.820990826689112 0.7124249405779042 0.8497642465403991 0.9671368061387438 0.765254802357265 0.9473093809674006 0.867825518253603 1.0 17.510294994359153 -4.771468005338145 24.99933640771844 0.8583574660545057 1.1140009401539654 0.50637899577951 0.09755484918632376 133.7803453375894 333489.5871607372 0.025026300312703885 0.05308506464382395 1.692512928001245e-05 4.771468005338145 0.25564347409945976 S(ph)LGLDINMDSR ddPTM_KYSE-520_SHP099_60min_R1 1 SLGLDINMDSR 11 0 Q96H22-5;Q96H22-4;Q96H22;Q96H22-3 Q96H22-5 CENPN Centromere protein N 1 S(1)LGLDINMDSR 166.86 5.8075e-05 0.0 39914.0 48850.0 39949.0 40783.0 30982.0 32274.0 37630.0 40913.0 46017.0 45870.0 True False 37699.89085341366 46503.17267465511 42524.17646065998 44659.00405814393 33420.10713653374 32072.56599456757 41434.00763340903 40771.08235216598 37661.47279416932 45463.62748631997 0.8292319143420215 1.0228654255239078 0.935344995809134 0.9823018207595038 0.7350954814723015 0.7054554985569117 0.911366072711126 0.8967846299645583 0.8283868858793038 1.0 15.472425179141586 -5.736726338210495 24.995681889014254 0.8372435431067821 0.9476745133138791 0.20404165535574037 0.0918929489419186 337.9797951694413 341843.71236185654 0.027475467291604275 0.0354547257638597 1.8334693816953184e-06 5.736726338210495 0.11043097020709702 S(ph)LGMIFEKR ddPTM_KYSE-520_SHP099_60min_R1 1 SLGMIFEKR 9 1 A0A2R8Y829;P00480 A0A2R8Y829 OTC Ornithine carbamoyltransferase, mitochondrial 1 S(1)LGMIFEKR 56.093999999999994 0.034082 3296500000.0 4105200.0 3643600.0 3365600.0 3010000.0 4080400.0 3645800.0 3763200.0 4186200.0 4232600.0 3319400.0 True False 3877476.372486684 3468555.986844899 3582551.9611503957 3296069.4950105026 4401504.265699834 3623045.209859155 4143620.981292714 4171679.049266425 3464066.535163112 3289992.698454124 1.1785668625673857 1.0542746761944721 1.0889239854039 1.001847054724235 1.3378462109560236 1.1012319910501696 1.2594620599734723 1.267990367038377 1.0529100981867774 1.0 21.6496529514866 -5.729682469866888 24.999994495169368 1.1843506369032664 1.0795740890599521 0.13795145692540522 0.10532680620750515 328.55257344917993 258645.0134976475 0.029479153006973065 0.03805407374717431 1.863449081158773e-06 5.729682469866888 -0.10477654784331425 S(ph)LGPVELLLR ddPTM_KYSE-520_SHP099_60min_R1 1 SLGPVELLLR 10 0 Q16512-3;Q16512;Q16512-2;K7EKY9;K7EM57 Q16512-3 PKN1 Serine/threonine-protein kinase N1 1 S(1)LGPVELLLR 78.342 0.013054 4742700.0 3697.1 2721.1 4724.3 3573.9 4893.3 4353.9 3427.6 2642.2 4795.3 5159.2 True False 3492.014493013869 2590.3742715456297 5028.83593714726 3913.562381467786 5278.374870931525 4326.725695102798 3774.095258152345 2633.034824894117 3924.5943996757724 5113.493501796865 0.6829019127112974 0.5065762322051217 0.9834442803887682 0.7653402473460802 1.0322443685665625 0.8461388859851687 0.7380659145897303 0.5149189734902131 0.7674976800687598 1.0 12.320093551492295 -4.748339316882667 24.999994914618647 0.8157021365801307 0.5947390563429419 0.2781829507853574 0.15060658935139457 334.4353356612097 638221.1968750082 0.040456633351063157 0.10562860563490523 1.7850923265272584e-05 4.748339316882667 -0.2209630802371888 S(ph)LGSPLLHER ddPTM_KYSE-520_SHP099_60min_R1 1 SLGSPLLHER 10 0 E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82;H7C3L4;E7EQA9;Q92844 E7EV32 TANK TRAF family member-associated NF-kappa-B activator 1 S(0.5)LGS(0.5)PLLHER 99.01100000000001 0.014927000000000001 0.0 138860.0 144840.0 126700.0 140470.0 124970.0 138590.0 106160.0 122290.0 171900.0 128520.0 True False 131157.15898945282 137881.66899072766 134867.2847271675 153820.22656615468 134804.42801796604 137725.00840264987 116891.68882175656 121865.80453270052 140687.293246359 127381.41278704684 1.0296412649207949 1.082431619919579 1.0587673803919524 1.2075562925597914 1.0582739276359638 1.0812017655424753 0.9176510627745451 0.9567000543197997 1.104457001757051 1.0 16.958795252531036 -6.637700613502454 8.984377197743708 0.9912547152672647 1.0898933535210493 0.3398721024901987 0.06245805110769145 0.3045298990199571 22.705903224429964 0.02424686879142016 0.018752050383090076 2.3030288929550323e-07 6.637700613502454 0.0986386382537846 S(ph)LGSVQAPSYGAR ddPTM_KYSE-520_SHP099_60min_R1 2 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(1)LGSVQAPSYGAR;S(1)LGSVQAPSYGAR 184.87 4.2748e-08 871380000.0 2494300.0 2287700.0 2252200.0 1932780.0 2191400.0 2239700.0 2028980.0 2361200.0 2564900.0 2389400.0 True False 2355936.2067362233 2177795.4580922937 2397380.4156474117 2116470.8300885023 2363850.7126395963 2225721.2015254702 2234089.0993365482 2353009.548308222 2099178.8158672866 2368231.7749250703 0.9948081229552643 0.9195871287392038 1.012308187497089 0.8936924385939659 0.9981500703048322 0.9398240599131776 0.9433574547015077 0.993572323968447 0.8863907823944739 1.0 21.175378851377115 S(ph)LGVLPFTLNSGS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 1 SLGVLPFTLNSGSPEK 16 0 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 2 S(1)LGVLPFT(0.001)LNS(0.312)GS(0.687)PEK 149.53 8.7537e-06 71386000.0 103870.0 98202.0 83267.0 87893.0 94509.0 92802.0 95949.0 88621.0 117230.0 110630.0 True False 98108.12404028847 93484.22851579277 88634.52405191051 96246.32429400602 101946.32061734771 92222.78829484602 105648.46129200017 88313.59443529687 95943.98712781082 109649.90426883762 0.8947397144985076 0.85257008785516 0.8083410983615454 0.877760221824098 0.9297438178094309 0.8410658350301509 0.9635071001336509 0.8054142411175409 0.8750029265194533 1.0 16.74254502688668 -10.491985582137747 2.8503763651909813 1.0045704462228826 0.8712599269576546 0.40013264235320833 0.04700308250059317 15912367.637458023 17315343.178867053 572008.9332224978 0.011446988705165154 3.221175727242705e-11 10.491985582137747 -0.13331051926522797 S(ph)LHLDK ddPTM_KYSE-520_SHP099_60min_R1 5 SLHLDK 6 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(1)LHLDK;S(1)LHLDK;S(1)LHLDK;S(1)LHLDK;S(1)LHLDK 113.71 0.007714 3292990000.0 4896400.0 3974690.0 4113380.0 4002000.0 3825630.0 4125980.0 4009190.0 4171990.0 4984830.0 3992060.0 True False 4624786.931268585 3783739.9262686786 4378535.056440701 4382348.876754825 4126685.3161428403 4100228.2283654343 4414478.051123763 4157518.3404397857 4079710.5293382695 3956693.454175679 1.1688514626746827 0.9562883680755013 1.106614678935977 1.1075785697094962 1.042963111480815 1.0362764454340723 1.1156987778431415 1.0507557354619341 1.0310908784284931 1.0 21.915863865801857 -7.862848429892465 2.244369172433783 1.001920450107075 1.0716071708844122 0.1686242578703785 0.05432053675676725 0.5163245222295261 5.326991546045884 0.04886286993342327 0.013700384660279835 1.3713602916086294e-08 7.862848429892465 0.06968672077733706 S(ph)LHS(ph)AHS(ph)LAS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SLHSAHSLASR 11 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0;X6RGP5 O15027 SEC16A Protein transport protein Sec16A 4 S(1)LHS(1)AHS(1)LAS(1)R 59.306000000000004 0.02833 105260000.0 347750.0 332920.0 293180.0 343410.0 294370.0 322370.0 296840.0 350940.0 381660.0 323980.0 True False 328459.61427756154 316926.0234768921 312078.85190458596 376047.5831500184 317535.24426381267 320357.96925292 326847.48407922225 349722.67105001217 312360.16486565094 321109.78925262595 1.0228888226735227 0.9869709179982602 0.9718758578831893 1.171087259672957 0.9888681531723684 0.9976586824043708 1.0178683273404732 1.089106227075736 0.972751922613946 1.0 18.292707121720806 S(ph)LIENVIK ddPTM_KYSE-520_SHP099_60min_R1 1 SLIENVIK 8 0 A0A3B3ISC9;H3BU64;A5PLK6-4;A5PLK6-5;A5PLK6-3;A5PLK6-2;A5PLK6 A0A3B3ISC9 RGSL1 Regulator of G-protein signaling protein-like 1 S(1)LIENVIK 54.608000000000004 0.055608000000000005 38806000.0 31981.0 40964.0 37403.0 33355.0 34484.0 34473.0 34286.0 41260.0 49743.0 37001.0 True False 30206.950177457074 38996.02795178244 39814.057226915946 36525.049171453575 37197.6946128794 34257.84121988993 37751.96347911407 41116.878690156416 40710.92511898568 36673.199926342415 0.8236791509365774 1.0633385695850208 1.0856444844431874 0.9959602446695025 1.0143018522406124 0.9341383159554199 1.0294155829035463 1.1211696490281478 1.1101001603555996 1.0 15.162438533694257 -7.027379555290479 8.061361745198905 1.084737383523241 0.9947406466026308 0.22464406789925495 0.07445894941156919 0.38901071241061064 99.93252081073189 0.03427786744893993 0.020429341574212882 9.389023903043978e-08 7.027379555290479 -0.08999673692061017 S(ph)LIVEGK ddPTM_KYSE-520_SHP099_60min_R1 8 SLIVEGK 7 0 A0A494C198;B4DFG0;H0Y993;A0A494C028;P35659;H0Y8X0;D6R9L5 A0A494C198 DEK Protein DEK 1 S(1)LIVEGK;S(1)LIVEGK;S(1)LIVEGK;S(1)LIVEGK;S(1)LIVEGK;S(1)LIVEGK;S(1)LIVEGK;S(1)LIVEGK 131.22 0.0020017 29962780000.0 32716000.0 27035020.0 27469300.0 27617000.0 27007990.0 25788300.0 29466560.0 30100490.0 30186200.0 29971600.0 True False 30901178.26227088 25736217.05880765 29240015.030433964 30241711.3766462 29133365.158557594 25627345.65401581 32445327.450712357 29996078.425697166 24705147.012177117 29706074.941551987 1.0402309400710228 0.8663620861875826 0.9843109561921252 1.0180312086382364 0.9807207857611204 0.8626971319650524 1.092211862878215 1.0097624302340775 0.8316530225142696 1.0 24.82425465893569 S(ph)LIYTDTLVR ddPTM_KYSE-520_SHP099_60min_R1 7 SLIYTDTLVR 10 0 Q5SYE7-2 Q5SYE7-2 NHSL1 NHS-like protein 1 1 S(1)LIYTDTLVR;S(1)LIYTDTLVR;S(0.996)LIYT(0.004)DTLVR;S(1)LIYTDTLVR;S(1)LIYTDTLVR;S(1)LIYTDTLVR;S(1)LIYTDTLVR 218.55 3.5096e-09 2755150000.0 1944054.0 2032974.0 1970110.0 1929640.0 1887320.0 1673210.0 1710432.0 2007430.0 2259210.0 2046120.0 True False 1836213.4492444303 1935306.8774838129 2097106.4428874536 2113032.4054325805 2035841.346618127 1662766.875744264 1883339.1587676625 2000466.693867685 1848994.4140494885 2027992.968657274 0.9054338341518905 0.9542966407645741 1.0340797405604119 1.0419328065183633 1.0038700222743127 0.819907613804586 0.9286714440704466 0.9864268391384936 0.9117361068927671 1.0 20.951621219643304 S(ph)LKEGLTVQER ddPTM_KYSE-520_SHP099_60min_R1 4 SLKEGLTVQER 11 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)LKEGLTVQER;S(1)LKEGLTVQER;S(1)LKEGLTVQER;S(1)LKEGLTVQER 176.49 4.6432e-06 1890290000.0 1331390.0 1488840.0 1572540.0 1035190.0 1245970.0 1123860.0 942020.0 930970.0 1845300.0 1091900.0 True False 1257535.1426398356 1417313.891605599 1673908.444552962 1133574.1463587766 1344020.7504004575 1116845.5728652999 1037248.5748292312 927740.6823600315 1510240.0362274933 1082226.6154853448 1.1619887412174486 1.309627642977509 1.5467263700609197 1.047446191156927 1.241903249438849 1.0319886397955844 0.9584393508600393 0.8572517706413724 1.395493341799026 1.0 20.04557119677413 -5.292428388968172 24.535823443056774 1.0702979036959328 1.3364656324487842 0.34553873088767584 0.16595334570729794 577.3078619170852 457087.35184750677 0.0469229509615524 0.06960746626126998 5.100016850720523e-06 5.292428388968172 0.26616772875285144 S(ph)LKESEQES(ph)EEEILAQK ddPTM_KYSE-520_SHP099_60min_R1 2 SLKESEQESEEEILAQK 17 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 S(0.615)LKES(0.385)EQES(1)EEEILAQK;S(0.542)LKES(0.458)EQES(1)EEEILAQK 138.62 8.4781e-06 3440000000.0 4429460.0 3656870.0 3603240.0 3839000.0 3997910.0 4038380.0 4140490.0 4258030.0 4566710.0 4111900.0 True False 4183749.023890406 3481188.47612622 3835510.6157878437 4203857.405762567 4312522.772003733 4013174.972459004 4559051.136488273 4243259.887761677 3737510.5813908107 4075471.7650097967 1.0265680306781242 0.8541804916952607 0.9411206449073813 1.0315020317046564 1.0581652924280205 0.9847142131898334 1.1186560475354719 1.0411702331475916 0.917074340565779 1.0 21.958535640605476 -5.236669851394297 6.043847260994815 1.027455254614183 0.9311491778634724 0.2528236669164974 0.06270520561118717 0.21507233506459675 28.247424750929508 0.01695224625777937 0.028724554103420105 5.798693428416697e-06 5.236669851394297 -0.09630607675071068 S(ph)LLDASEEAIK ddPTM_KYSE-520_SHP099_60min_R1 3 SLLDASEEAIK 11 0 P18206-2;P18206 P18206-2 VCL Vinculin 1 S(1)LLDASEEAIK;S(1)LLDASEEAIK;S(1)LLDASEEAIK 186.58 9.866799999999999e-07 257344000.0 717200.0 650120.0 591830.0 677110.0 678680.0 619120.0 630620.0 787710.0 750340.0 684130.0 True False 677415.4862972453 618887.259349986 629980.3087614804 741462.3308194553 732088.2548390265 615255.8424290972 694369.2238581021 784977.6178628954 614097.17053213 678069.1404450854 0.9990360066417253 0.9127199903888086 0.9290797518789317 1.0934907468768724 1.0796660859075269 0.9073644643748904 1.024038969539769 1.1576660417662352 0.9056556830311374 1.0 19.37107286209277 -5.236691183678331 24.5451447828744 1.0280159028837874 0.9435227083847424 0.17430645248047538 0.07637571111650841 1019.7448176527278 1011375.863704029 0.02062874106997368 0.03570605959861404 5.7984086070744455e-06 5.236691183678331 -0.08449319449904502 S(ph)LLDASEEAIKK ddPTM_KYSE-520_SHP099_60min_R1 13 SLLDASEEAIKK 12 1 P18206-2;P18206 P18206-2 VCL Vinculin 1 S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK;S(1)LLDASEEAIKK 226.65 2.2017e-11 41502960000.0 22204010.0 17980770.0 16276300.0 19062290.0 19383960.0 17860440.0 19025630.0 20776290.0 23311870.0 20689330.0 True False 20972309.302703436 17116946.819513973 17325496.341000758 20873964.310313545 20909367.372354385 17748966.36896616 20948926.35265524 20704221.899212535 19079022.052419998 20506038.632255152 1.022738212816729 0.834727132162412 0.8448972837566232 1.0179423088318804 1.0196687789061711 0.8655482751821099 1.0215979170010654 1.0096646295518847 0.930409934096656 1.0 24.2895454823295 -5.265926616870895 24.980172467860058 0.9796239636584124 0.8941815018475707 0.2313767961751071 0.06639065597792268 515.5745630917772 2870176.8078235975 0.01850984122530029 0.028534184084480385 5.4209248051723154e-06 5.265926616870895 -0.0854424618108417 S(ph)LLGIDTEDAIQGR ddPTM_KYSE-520_SHP099_60min_R1 2 SLLGIDTEDAIQGR 14 0 P49454 P49454 CENPF Centromere protein F 1 S(1)LLGIDTEDAIQGR;S(1)LLGIDTEDAIQGR 141.34 5.5878999999999995e-06 305743000.0 374380.0 411220.0 399140.0 289564.0 298015.0 316056.0 289139.0 346500.0 486450.0 339849.0 True False 353612.39509197307 391464.37394619605 424869.20304657955 317084.07549940876 321467.0850265993 314083.37726897944 318367.9918447051 345298.0723737076 398122.9424065815 336838.2022585208 1.0497989619971257 1.1621733263074183 1.2613450618065454 0.9413542566530179 0.9543664669599314 0.9324458305590967 0.9451659274691177 1.0251155304192423 1.1819411804752036 1.0 18.361696244323994 -5.272879268923696 24.964948008894982 0.9915942196139746 1.1582125414112312 0.4372782184748524 0.08330420295398454 661.1178708289472 1442737.5641236547 0.024721811512029686 0.03702748002602609 5.334831797728052e-06 5.272879268923696 0.16661832179725655 S(ph)LLGLSNSEPNGSVETK ddPTM_KYSE-520_SHP099_60min_R1 2 SLLGLSNSEPNGSVETK 17 0 G3V340;Q13033-2;Q13033;G3V3G7 G3V340 STRN3 Striatin-3 1 S(1)LLGLSNSEPNGSVETK;S(0.981)LLGLS(0.019)NSEPNGSVETK 314.55 2.5425e-47 264730000.0 329400.0 352740.0 293220.0 244348.0 265310.0 330490.0 228028.0 298620.0 368890.0 342060.0 True False 311127.5253573794 335793.84092646535 312121.4303685882 267570.7604540949 286188.38759259426 328427.289320959 251079.29557882014 297584.1569184319 301908.87496014783 339029.6145186533 0.9177001419156593 0.9904557789242628 0.9206317590035055 0.7892253331142942 0.8441397899676645 0.9687274363546463 0.7405821934915536 0.8777526923154937 0.8905088583154935 1.0 18.371051773913845 -5.009190893451565 24.050383263719716 0.864379538753922 0.9544444397268068 0.16233169992689678 0.07360266336383917 391.4022103125548 1024222.0038348038 0.018794619641686685 0.03602098151020786 9.790595467434453e-06 5.009190893451565 0.09006490097288478 S(ph)LLGVK ddPTM_KYSE-520_SHP099_60min_R1 2 SLLGVK 6 0 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;H3BNI3;H3BP82;H3BTR6;H3BUG0;H3BTY0;H3BNU7;H3BTV0;H3BRK4 H3BMM9 RNPS1 RNA-binding protein with serine-rich domain 1 1 S(1)LLGVK;S(1)LLGVK 77.923 0.028549 530420000.0 639490.0 564330.0 496350.0 564600.0 558600.0 582150.0 560570.0 587790.0 673780.0 555450.0 True False 604016.2149082901 537218.7397234 528345.5151880787 618259.4142468203 602558.6420007659 578516.5859124224 617237.8862359844 585751.0936812178 551438.5366115868 550529.1451335611 1.09715574597191 0.9758225236069347 0.9597048945699315 1.1230275812133932 1.0945081606071594 1.0508373462626968 1.121172042737609 1.0639783540235852 1.0016518498358613 1.0 19.070459416839775 -3.92157022094349 19.642423214903243 1.0487739522795299 2.776919439705778 0.07034165577710583 0.0556207992569041 941.7306432655756 266352.84394139197 0.01424200555027658 9252.037389834186 0.00011979254153319056 3.92157022094349 1.728145487426248 S(ph)LMS(ph)SPEDLTKDFEELKAEEVDVTK ddPTM_KYSE-520_SHP099_60min_R1 3 SLMSSPEDLTKDFEELKAEEVDVTK 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.644)LMS(0.705)S(0.645)PEDLT(0.006)KDFEELKAEEVDVTK;S(0.657)LMS(0.688)S(0.625)PEDLT(0.03)KDFEELKAEEVDVTK;S(0.67)LMS(0.635)S(0.639)PEDLT(0.057)KDFEELKAEEVDVTK 79.021 0.010693000000000001 942240000.0 262993.0 277389.0 301431.0 256003.0 216159.0 207226.0 185188.0 209031.0 397963.0 225011.0 True False 248404.25402645196 264062.81607062276 320861.7245666528 280333.4481498917 233169.48352352928 205932.6256674185 203908.61030071112 208305.92024920214 325702.95103083615 223017.577595909 1.1138326256800335 1.1840448583343715 1.438728408879187 1.2570015833363355 1.045520653739746 0.9233919042944357 0.914316317569273 0.9340336420774721 1.4604362335106396 1.0 17.76679789808489 -5.772149992392212 6.460975777915681 1.0293975928113868 1.2580908772377086 0.25607318347671815 0.16710855519247886 0.20005447696061254 34.34691284474352 0.05259179423897843 0.06272396375962935 1.6898572044490347e-06 5.772149992392212 0.22869328442632186 S(ph)LMSS(ph)PEDLTKDFEELKAEEVDVTK ddPTM_KYSE-520_SHP099_60min_R1 2 SLMSSPEDLTKDFEELKAEEVDVTK 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.43)LMS(0.43)S(0.629)PEDLT(0.511)KDFEELKAEEVDVTK;S(0.596)LMS(0.542)S(0.861)PEDLTKDFEELKAEEVDVTK 111.24 0.00021976 754540000.0 428890.0 489090.0 429100.0 428480.0 389260.0 371710.0 305010.0 368540.0 648930.0 339430.0 True False 405098.61672898213 465593.38226094336 456760.4725842744 469202.6103727905 419892.54741356696 369390.0200111765 335843.3874107382 367261.62075788254 531100.6701940645 336422.91427254374 1.2041350322552722 1.3839526456386253 1.357697270924425 1.3946808926120857 1.2481092386988915 1.097993044884943 0.9982773858818189 1.0916664863688674 1.578669726889673 1.0 18.35991644751356 -6.008491501892663 4.782437732770219 1.1505623354010792 1.3394285274857787 0.22052575606746183 0.16100085391257665 0.29590246697498046 18.502277678437075 0.053097025118026366 0.05684473139984094 9.806375028716124e-07 6.008491501892663 0.18886619208469946 S(ph)LMSSPEDLTKDFEELKAEEVDVTK ddPTM_KYSE-520_SHP099_60min_R1 2 SLMSSPEDLTKDFEELKAEEVDVTK 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.275)LMS(0.249)S(0.249)PEDLT(0.226)KDFEELKAEEVDVTK;S(0.348)LMS(0.324)S(0.324)PEDLT(0.005)KDFEELKAEEVDVTK 69.35600000000001 0.015898 129209000.0 100310.0 113991.0 121694.0 88620.0 92144.0 95070.0 78616.0 89301.0 166381.0 88220.0 True False 94745.60433697252 108514.7012560207 129538.58995728455 97042.4181554254 99395.20857235685 94476.63286557411 86563.27249822185 88991.23567401005 136170.40452369096 87438.4394341214 1.0835692511227462 1.2410411480156704 1.4814833246753287 1.109837032584964 1.1367449970015076 1.0804931272447456 0.9899910503713995 1.0177587368889236 1.5573288522182007 1.0 16.415980032151843 S(ph)LNANTDITSLAR ddPTM_KYSE-520_SHP099_60min_R1 1 SLNANTDITSLAR 13 0 Q92845-2;Q92845-3;Q92845 Q92845-2 KIFAP3 Kinesin-associated protein 3 1 S(1)LNANTDITSLAR 202.42 7.4446e-09 318370000.0 339570.0 271680.0 302410.0 276840.0 294140.0 329770.0 297680.0 364520.0 425160.0 330960.0 True False 320733.3751839871 258628.08500000605 321903.8324731078 303150.79036501923 317287.14457233343 327711.7831080295 327772.39947683236 363255.5651996076 347961.66141141346 328027.95188298373 0.9777623319685914 0.7884330695460536 0.9813304952376114 0.9241614582685355 0.9672564266276862 0.9990361529462983 0.9992209432010766 1.1073921082468925 1.0607683260344247 1.0 18.323459229294762 -6.198430420409177 0.8655906591940068 1.0590572299819092 0.8995661502201233 0.4946693073174827 0.056809826220149 0.4533202554935986 0.7380488160766395 0.033946832983929386 0.03385901225762815 6.332418071085993e-07 6.198430420409177 -0.1594910797617859 S(ph)LNLEDYK ddPTM_KYSE-520_SHP099_60min_R1 4 SLNLEDYK 8 0 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog 1 S(1)LNLEDYK;S(1)LNLEDYK;S(1)LNLEDYK;S(1)LNLEDYK 142.89 0.00056859 1012440000.0 1867320.0 1453640.0 1393980.0 1413830.0 1400530.0 1600360.0 1512420.0 1615060.0 1715910.0 1638190.0 True False 1763736.0371898678 1383804.9524418777 1483838.1812468595 1548199.97811651 1510743.7430743524 1590371.5596166013 1665310.1733967727 1609457.7338178363 1404343.9985710299 1623676.911092533 1.0862604654537413 0.8522662008605817 0.9138752735286607 0.9535148079889635 0.9304460344009015 0.9794876977997296 1.025641346514083 0.9912426067171646 0.8649159133673218 1.0 20.630833154349087 -6.267571179312106 23.12828119162048 0.9750466680679707 0.9404858130892535 0.027537813024995583 0.0675314203403376 597.6865600931094 2254374.9726849957 0.02312519422056045 0.020950581722724036 5.400435962972141e-07 6.267571179312106 -0.03456085497871719 S(ph)LNLEDYKK ddPTM_KYSE-520_SHP099_60min_R1 5 SLNLEDYKK 9 1 Q92541 Q92541 RTF1 RNA polymerase-associated protein RTF1 homolog 1 S(1)LNLEDYKK;S(1)LNLEDYKK;S(1)LNLEDYKK;S(1)LNLEDYKK;S(1)LNLEDYKK 136.99 0.00030258 2047480000.0 3317890.0 2775230.0 2713310.0 2564810.0 2729230.0 2779230.0 2579460.0 2834130.0 3430370.0 2886400.0 True False 3133840.0276502646 2641903.7850948446 2888214.304049494 2808568.771261758 2944004.8738055006 2761883.794666976 2840216.989903622 2824299.0645209127 2807501.280590535 2860828.7415852193 1.0954308386575307 0.9234749870525051 1.0095725976414445 0.9817325764510799 1.029074138906404 0.9654138867245103 0.992795181556315 0.9872310856874065 0.9813594360894408 1.0 21.44800170520237 -6.278592532841715 24.899482944446557 0.9850265684929522 1.0018130914801884 0.06052894207875048 0.04098202485349887 3160.3060185303775 4587477.360571776 0.01361617019622291 0.012035447222952267 5.265110220071118e-07 6.278592532841715 0.016786522987236152 S(ph)LNLVDSPQPLLEK ddPTM_KYSE-520_SHP099_60min_R1 6 SLNLVDSPQPLLEK 14 0 P46019 P46019 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform 1 S(1)LNLVDSPQPLLEK;S(1)LNLVDSPQPLLEK;S(1)LNLVDSPQPLLEK;S(1)LNLVDSPQPLLEK;S(1)LNLVDSPQPLLEK;S(1)LNLVDSPQPLLEK 318.09 1.2595000000000001e-42 1280357000.0 2899250.0 2763610.0 2358460.0 1743720.0 1928180.0 2607260.0 2139740.0 2167740.0 2459270.0 2412040.0 True False 2738422.8229884123 2630842.0273368177 2510490.105269421 1909442.6245314644 2079916.7961565268 2590987.1232260074 2356045.801049978 2160220.6158943167 2012728.5611516798 2390671.202138722 1.1454619190370419 1.1004616715938336 1.050119356866602 0.7987056617502462 0.8700137410346556 1.0837906613456842 0.9855164520082195 0.9036042321343724 0.8419094015735287 1.0 21.188984293826945 -5.038034100247773 6.680791323378191 0.9281951528339751 1.1123229490378368 0.5139696218574263 0.07882414493249365 0.1735811712253676 23.440175738301708 0.023040440288046 0.041585141378763846 9.161485524841336e-06 5.038034100247773 0.18412779620386166 S(ph)LNPALDGLTCGLTSHDK ddPTM_KYSE-520_SHP099_60min_R1 1 SLNPALDGLTCGLTSHDK 18 0 A0A0A0MRE6;O94967-2;O94967;O94967-3;O94967-4 A0A0A0MRE6 WDR47 WD repeat-containing protein 47 1 S(1)LNPALDGLTCGLTSHDK 162.11 8.7085e-06 0.0 61956.0 48552.0 54858.0 53523.0 54947.0 52241.0 51762.0 67277.0 71734.0 56913.0 True False 58519.17717377603 46219.48904196225 58394.23445590341 58609.80982772324 59271.01629433602 51914.94454118495 56994.608108437926 67043.63178956979 58708.913866982635 56408.79509764395 1.0374122877909198 0.8193667133282327 1.0351973367774059 1.0390189991874372 1.0507406902015466 0.9203342218411132 1.0103851360373843 1.188531534373618 1.0407758890321477 1.0 15.783632500586908 -5.479245580341829 0.5518523504946913 1.063464055314268 0.9285786920056693 0.12301873869167734 0.08429068975076145 2.4730462261099193 1.3498156013855447 0.06253809733387916 0.18529565479139118 3.317068343677019e-06 5.479245580341829 -0.13488536330859868 S(ph)LPAEEGSSGK ddPTM_KYSE-520_SHP099_60min_R1 1 SLPAEEGSSGK 11 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 S(1)LPAEEGSSGK 122.46 0.00021087 526920000.0 347510.0 309760.0 229390.0 288910.0 258560.0 308140.0 257110.0 286390.0 339660.0 259810.0 True False 328232.9275559893 294878.6646407611 244176.84643697724 316367.9195360415 278907.2009948409 306216.783961271 283101.1879517882 285396.5799339284 277986.30613181106 257508.28552912112 1.2746499666274624 1.1451230162744175 0.9482290868243296 1.2285737481649461 1.0830999104426866 1.1891531308674785 1.0993867143734015 1.1083005711738678 1.079523734782406 1.0 17.974259327313117 -13.999999999907514 0.10280259654861124 0.595234567392778 1.2076992830734252 0.22965517737388308 0.08251803249772947 308.3452216219515 2.139556119501131 26.545821488051317 1.2923458502154934 1.000000000212957e-14 13.999999999907514 0.6124647156806472 S(ph)LPAEEGSSGKK ddPTM_KYSE-520_SHP099_60min_R1 2 SLPAEEGSSGKK 12 1 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 S(1)LPAEEGSSGKK;S(1)LPAEEGSSGKK 120.66 8.0788e-05 2297900000.0 2015470.0 1779030.0 1708760.0 1736510.0 1781110.0 1696450.0 1553050.0 1768830.0 2179210.0 1676760.0 True False 1903667.8613601634 1693562.728421529 1818909.4037126664 1901547.3882992319 1921273.223870365 1685861.8262838235 1710047.4503073564 1762694.341578024 1783520.3974135998 1661905.2108995412 1.1454731887685479 1.0190489308983228 1.0944724114127684 1.1441972597642793 1.1560666705115121 1.0144151514942994 1.0289681018460477 1.0606467384646616 1.0731781726878586 1.0 20.664406667638808 -6.274270390955508 24.830372635468972 1.0388274573533143 1.1075274452249189 0.45943505695196785 0.041226553964126736 791.0160934933472 1530757.3564861296 0.015366471452111787 0.013636072215879206 5.317770727399475e-07 6.274270390955508 0.06869998787160458 S(ph)LPAFPTSSLLTQSQK ddPTM_KYSE-520_SHP099_60min_R1 3 SLPAFPTSSLLTQSQK 16 0 Q99698 Q99698 LYST Lysosomal-trafficking regulator 1 S(1)LPAFPTSSLLTQSQK;S(1)LPAFPTSSLLTQSQK;S(0.983)LPAFPT(0.01)S(0.002)S(0.004)LLTQSQK 144.29 7.9554e-06 865225000.0 553330.0 564420.0 488070.0 488990.0 498430.0 561240.0 543470.0 574050.0 631940.0 559560.0 True False 522635.68186399154 537304.4159883081 519531.7731396105 535463.4625797954 537653.6053212351 557737.0929785932 598409.2513560673 572058.7545342777 517195.6259110191 554602.733731092 0.9423604502414874 0.9688095339407916 0.9367638158659236 0.9654901247555397 0.9694391545893914 1.0056515394837937 1.0789872010371582 1.0314748192562093 0.9325515264441334 1.0 19.081095202120675 -6.190365983747833 2.93270787075406 1.0166371947410018 0.9544066494884086 0.36630914037663487 0.035054531705008475 0.2897724278947727 4.89709941703362 0.013075809628663731 0.012736838398250678 6.451103597782957e-07 6.190365983747833 -0.062230545252593195 S(ph)LPAGDALYLSFNPPQPSR ddPTM_KYSE-520_SHP099_60min_R1 8 SLPAGDALYLSFNPPQPSR 19 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYF0 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(1)LPAGDALYLSFNPPQPSR;S(1)LPAGDALYLSFNPPQPSR;S(1)LPAGDALYLSFNPPQPSR;S(1)LPAGDALYLSFNPPQPSR;S(1)LPAGDALYLSFNPPQPSR;S(1)LPAGDALYLSFNPPQPSR;S(1)LPAGDALYLSFNPPQPSR;S(1)LPAGDALYLSFNPPQPSR 264.66 3.664199999999999e-35 3727440000.0 630562.0 663701.0 533009.0 542861.0 496246.0 538638.0 493786.0 598667.0 754813.0 680118.0 True False 595583.4688658162 631815.8077244883 567367.6129845527 594454.3462228888 535297.7369464946 535276.1604443782 543702.7077669544 596590.363906928 617757.9864872829 674092.6836437966 0.8835335011298444 0.9372832891602066 0.8416759694196008 0.8818584753205981 0.7941010931211294 0.7940690849082531 0.8065696616494614 0.8850272052829128 0.9164288553734222 1.0 19.36258744127482 -7.981223901338957 1.895295952314053 0.9982123397763635 0.8492371487457587 0.5387476068932942 0.04312487281125826 0.29203885741011576 2.39107896160392 0.04621510646655404 0.013093960268272852 1.0441817505582756e-08 7.981223901338957 -0.14897519103060475 S(ph)LPAPK ddPTM_KYSE-520_SHP099_60min_R1 1 SLPAPK 6 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 S(1)LPAPK 86.794 0.044981 0.0 950190.0 897960.0 890480.0 866260.0 841280.0 867670.0 766040.0 823360.0 1048500.0 867630.0 True False 897481.0665431964 854820.653734562 947881.7656183764 948589.0899494347 907483.9497715809 862254.5496841546 843478.7990299403 820503.9563336686 858118.8305340755 859943.473205926 1.0436512334901826 0.9940428416157799 1.1022605498529 1.1030830740688478 1.0552832576174116 1.0026874748750785 0.9808537715687238 0.9541370821442201 0.9978781830100435 1.0 19.713882304477444 -6.362361628279988 3.012289683055112 0.9803225938615634 1.0612910202596684 0.5813690746044893 0.031092068838737785 0.20686536003463557 3.6182106611815565 0.012978087721792216 0.011311396552863963 4.3414856684062514e-07 6.362361628279988 0.08096842639810498 S(ph)LPAVLLPGGPEVMELNR ddPTM_KYSE-520_SHP099_60min_R1 7 SLPAVLLPGGPEVMELNR 18 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;D6RGZ3 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(1)LPAVLLPGGPEVMELNR;S(1)LPAVLLPGGPEVMELNR;S(1)LPAVLLPGGPEVMELNR;S(1)LPAVLLPGGPEVMELNR;S(1)LPAVLLPGGPEVMELNR;S(1)LPAVLLPGGPEVMELNR;S(1)LPAVLLPGGPEVMELNR 153.74 1.9517e-06 944145000.0 961902.0 928472.0 740466.0 620607.0 631400.0 874995.0 696193.0 779730.0 811804.0 812743.0 True False 908543.3785559026 883866.8114551147 788197.6231474899 679589.3026877013 681087.587825428 869533.8316420846 766570.982628911 777025.2986203493 664400.85751348 805542.7293244853 1.1278649108009353 1.0972314431989358 0.9784678012157831 0.8436415325324748 0.84550150231829 1.079438495300257 0.9516205096553285 0.9645984878691037 0.8247866107247166 1.0 19.619601591921782 -4.8030737785374304 3.417523110254616 0.9308893009645635 1.1198884583142692 0.485968869930792 0.07414923044266711 0.19638581156806081 4.654030114796893 0.02055695855780923 0.05366970458327175 1.5737154968268793e-05 4.8030737785374304 0.18899915734970574 S(ph)LPEEDVAEIQHAEEFLIKPESK ddPTM_KYSE-520_SHP099_60min_R1 13 SLPEEDVAEIQHAEEFLIKPESK 23 1 O60832;H7C2Q9;H7C0M1;C9IYT0;O60832-2 O60832 DKC1 H/ACA ribonucleoprotein complex subunit 4 1 S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK;S(1)LPEEDVAEIQHAEEFLIKPESK 345.26 7.481299999999999e-73 13045926000.0 6738368.0 6196897.0 5792259.0 5455050.0 5702772.0 5669705.0 4911689.0 6151326.0 7448702.0 5953654.0 True False 6364577.294436423 5899188.766387968 6165637.283082085 5973496.311879407 6151547.712065862 5634318.268024713 5408210.457585201 6129988.485836285 6096205.4832969215 5900909.257432724 1.0785756934695558 0.9997084362816478 1.0448622431053167 1.012300994860284 1.0424745481922868 0.9548220489796184 0.9165045964353841 1.0388210051044278 1.0330959547663277 1.0 22.49250584246293 -6.2429125154266965 24.364967239676567 0.9865660238844555 1.0328131931038447 0.26848449884995296 0.038525027388963455 904.2138857727366 1189146.5627160664 0.013428217985357652 0.013401281604822679 5.715937673094254e-07 6.2429125154266965 0.046247169219389206 S(ph)LPGSPEFLHQEACPFVGR ddPTM_KYSE-520_SHP099_60min_R1 3 SLPGSPEFLHQEACPFVGR 19 0 Q96S53-3;Q96S53-2;Q96S53 Q96S53-3 TESK2 Dual specificity testis-specific protein kinase 2 1 S(0.928)LPGS(0.072)PEFLHQEACPFVGR;S(0.988)LPGS(0.012)PEFLHQEACPFVGR;S(1)LPGSPEFLHQEACPFVGR 231.12 5.9963e-20 2828170000.0 90545.0 82134.0 99870.0 129049.0 89662.0 145828.0 86676.0 87135.0 141737.0 144439.0 True False 85522.28835301744 78188.1593543525 106307.77999764975 141313.77816000345 96717.88929300506 144917.83335985013 95438.05595624127 86832.74902246197 116001.13369900643 143159.38283184168 0.5973921279995591 0.5461616123771231 0.7425833912857903 0.9871080425513841 0.6755958804782788 1.0122831664486425 0.66665596112792 0.6065459860528857 0.8102936140431958 1.0 17.127262703777618 -13.999978707713092 0.03371092880838266 2.125117419926642 6.969453082938524e-49 0.2441412421267216 0.14728902025029073 2080.747873277757 5.254756269691101 272.741385574898 98.75392347775664 1.0000490285042875e-14 13.999978707713092 -2.125117419926642 S(ph)LPITIEMLK ddPTM_KYSE-520_SHP099_60min_R1 7 SLPITIEMLK 10 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(1)LPITIEMLK;S(1)LPITIEMLK;S(1)LPITIEMLK;S(0.998)LPIT(0.002)IEMLK;S(1)LPITIEMLK;S(1)LPITIEMLK;S(0.999)LPIT(0.001)IEMLK 207.88 6.2398999999999995e-09 3431602000.0 3171340.0 3022270.0 2742600.0 2808958.0 3037230.0 2987830.0 3134800.0 3025320.0 3401210.0 3033590.0 True False 2995419.4482904435 2877075.6126802447 2919392.3843151554 3075920.523775981 3276242.7215252165 2969181.844690738 3451696.1766997264 3014825.8710349943 2783636.0015267567 3006714.7526973034 0.9962433069526376 0.9568834589643862 0.9709575481665457 1.0230170723766174 1.0896420149553998 0.9875169708157732 1.1479958894016244 1.002697668054615 0.9258064799893557 1.0 21.519756575117995 -5.298680634732175 5.303666669638804 1.0319485048675556 0.9727246346766921 0.13427442416943525 0.05723355211469142 0.34677217902248375 26.256759404551605 0.016460364822653475 0.025436992175401515 5.027121308922112e-06 5.298680634732175 -0.0592238701908635 S(ph)LPIYSPEK ddPTM_KYSE-520_SHP099_60min_R1 1 SLPIYSPEK 9 0 E9PDF6;O43795-2;O43795;C9K0I9;C9JUP5;C9JYW1;E7EQD9 E9PDF6 MYO1B Unconventional myosin-Ib 1 S(1)LPIYSPEK 136.5 0.00096761 0.0 465470.0 398550.0 395560.0 343570.0 422550.0 382870.0 363330.0 389820.0 436020.0 400800.0 True False 439649.4512085598 379403.05976425385 421058.4305183777 376222.7895019127 455802.2810193766 380480.36631158437 400058.9421590882 388467.8054046716 356849.7591697352 397249.2238176811 1.106734575799545 0.9550756477711387 1.0599351874671603 0.9470699171827243 1.1473962784344385 0.9577875638246864 1.0070729360133293 0.9778944353153984 0.8983019670631569 1.0 18.599684875142195 -6.918830372644212 1.5211955901564738 0.9538714114963444 1.031648602582263 0.20342554246083944 0.06550383070194789 0.663841968404178 3.0398211697636524 0.03994989735474565 0.020681222720955517 1.205506696949906e-07 6.918830372644212 0.07777719108591874 S(ph)LPNLSR ddPTM_KYSE-520_SHP099_60min_R1 8 SLPNLSR 7 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 S(1)LPNLSR;S(1)LPNLSR;S(0.986)LPNLS(0.014)R;S(1)LPNLSR;S(1)LPNLSR;S(1)LPNLSR;S(1)LPNLSR;S(0.99)LPNLS(0.01)R 133.83 0.0018774999999999998 12412890000.0 5404560.0 4830250.0 4620010.0 3942270.0 4883900.0 4086980.0 3997770.0 4010240.0 4698220.0 4116850.0 True False 5104758.283076744 4598197.5396469375 4917823.236877364 4316942.155513309 5268235.144410207 4061471.6418317445 4401903.606075302 3996329.4134370503 3845141.6804881245 4080377.911860834 1.2510503667413362 1.1269048208208623 1.2052371969229236 1.0579760622085592 1.2911145139513946 0.9953665394633834 1.0787980185070254 0.9794017857562969 0.9423494008511013 1.0 21.9602713456187 -6.286575357544021 24.593483939016323 1.0028716592696851 1.1770537200260829 0.6544875502945429 0.06783601483490943 411.30446379741886 402426.02407781896 0.02302427540942798 0.02031419649479693 5.169215554274629e-07 6.286575357544021 0.17418206075639775 S(ph)LPQGTSAQK ddPTM_KYSE-520_SHP099_60min_R1 1 SLPQGTSAQK 10 0 A0A087X0J2 A0A087X0J2 UBXN8 1 S(0.999)LPQGT(0.001)S(0.001)AQK 49.626999999999995 0.05358400000000001 898220000.0 549840.0 537180.0 539050.0 456470.0 484810.0 484050.0 486640.0 449150.0 560800.0 586460.0 True False 519339.279121134 511373.0664763818 573798.0255104944 499852.7715572907 522961.78880843427 481028.8644007695 535834.320348716 447592.00348239846 458972.8566175579 581264.4206589763 0.8934647651964693 0.8797597931362132 0.9871549076752069 0.8599404226231675 0.8996968853100545 0.8275560094585348 0.9218426267020499 0.7700316543974356 0.789611131018862 1.0 19.148835077983755 -5.90154268068704 1.5559882200042987 0.850653784534498 0.9132664838523618 0.07256134939033787 0.06913352827466829 0.816100931709284 4.078462770206246 0.026153338746572698 0.031540723155112305 1.254461448454812e-06 5.90154268068704 0.06261269931786373 S(ph)LPRPAK ddPTM_KYSE-520_SHP099_60min_R1 1 SLPRPAK 7 1 H0Y6F6;A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-5;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 H0Y6F6 NAV1 Neuron navigator 1 1 S(1)LPRPAK 62.558 0.05954500000000001 582630000.0 463930.0 449180.0 473440.0 502090.0 488620.0 377960.0 424340.0 515830.0 512120.0 451100.0 True False 438194.87807847385 427600.7185670744 503958.69993078377 549808.4826411367 527071.6141325 375601.01144285704 467236.42835930875 514040.7061256265 419131.91749462124 447103.604950489 0.9800745805370956 0.9563794919846949 1.1271631325508786 1.2297115848619047 1.1788578940016967 0.8400760076279189 1.0450294365464783 1.1497127297431429 0.9374380185125878 1.0 18.77024965266634 -6.2000694006687365 24.999953598437692 1.0069658897963762 1.096100704213332 0.1760910853197616 0.1064002327280983 528.4475182598868 215270.31866311544 0.03834279345711414 0.03834278643887554 6.308565249558584e-07 6.2000694006687365 0.0891348144169557 S(ph)LPRPHDFFDAQTLDAIR ddPTM_KYSE-520_SHP099_60min_R1 2 SLPRPHDFFDAQTLDAIR 18 1 Q6ZN18-2;Q6ZN18;A0A669KBC9;A0A669KBL4;G5EA50;Q6ZN18-3 Q6ZN18-2 AEBP2 Zinc finger protein AEBP2 1 S(1)LPRPHDFFDAQTLDAIR;S(1)LPRPHDFFDAQTLDAIR 173.68 8.190699999999999e-09 133706000.0 69135.0 47957.0 58735.0 54920.0 57997.0 63324.0 53861.0 53790.0 68290.0 58096.0 True False 65299.94373279424 45653.07373507543 62521.1520793227 60139.58028769993 62561.03394220985 62928.771427154854 59305.79551270383 53603.415044680376 55890.257450807854 57581.31463800406 1.1340474621552985 0.7928452836146969 1.085788896491403 1.0444287468214106 1.0864815146286906 1.0928679177050507 1.0299486193662135 0.9309168326855419 0.9706318412869285 1.0 15.81331310697247 -7.201292541085696 8.629960120837975 0.9631689733089934 1.0347899020481914 0.11583854382063674 0.08921936574038557 0.8470465089877459 115.33042547749459 0.042366826350285214 0.024370054059721945 6.290822898080591e-08 7.201292541085696 0.07162092873919801 S(ph)LPRPSK ddPTM_KYSE-520_SHP099_60min_R1 3 SLPRPSK 7 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;H0YHA8;A0A2R8YFX5;E9PNV5;A0A0A0MTL4;A0A0A0MTE8;Q8IVL1-5;Q8IVL1-4;Q8IVL1-8;Q8IVL1-9;Q8IVL1-10;Q8IVL1-13;Q8IVL1-12;Q8IVL1-11;Q8IVL1-3;Q8IVL1-2;Q8IVL1 Q8IVL0-3;A0A0A0MTL4 NAV3;NAV2 Neuron navigator 3;Neuron navigator 2 1 S(1)LPRPSK;S(1)LPRPSK;S(1)LPRPSK 91.65799999999999 0.0046602 3051710000.0 2312650.0 2175100.0 2243760.0 2164040.0 2204850.0 1925360.0 1900860.0 2044450.0 2348830.0 2120510.0 True False 2184362.694346524 2070604.9311083395 2388396.3597429316 2369709.710957649 2378359.151119564 1913343.1140639703 2093017.4794058413 2037358.2801282164 1922341.6811858376 2101723.931131815 1.0393195138479516 0.9851935834376128 1.1363987079200921 1.1275076026191124 1.1316230052339824 0.910368429327253 0.9958574712896354 0.9693748307995252 0.9146499465087324 1.0 21.003141747975416 -6.261341379075047 24.999999942260274 0.9584990198855469 1.0838459527603952 0.6027399741783559 0.05112850741850394 6.887726206469216 1757167.0791160732 0.018829750596584947 0.017688299733978372 5.478461587577273e-07 6.261341379075047 0.12534693287484833 S(ph)LPS(ph)SPERR ddPTM_KYSE-520_SHP099_60min_R1 1 SLPSSPERR 9 1 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 2 S(1)LPS(0.526)S(0.474)PERR 54.523999999999994 0.040041 494320000.0 346960.0 295950.0 305630.0 311110.0 295570.0 290830.0 287760.0 305270.0 360890.0 296440.0 True False 327713.4371523877 281732.11776999355 325331.39882528974 340677.8008613675 318829.67743674625 289014.82209208887 316849.58906696184 304211.0896205534 295361.4732965592 293813.77222683013 1.1153780664147572 0.9588798906012163 1.1072707598407858 1.1595024912527157 1.085142044296696 0.9836666943881842 1.0784027810049273 1.0353874405373222 1.0052676260135764 1.0 18.164542496803673 -6.228130313600311 23.620987327828562 1.0263727395012798 1.083565185333767 0.26407935784087966 0.05351872767478068 555.0110568408696 393583.5172344809 0.018498669650894035 0.018496863368422548 5.913841579117788e-07 6.228130313600311 0.05719244583248706 S(ph)LPSHMEEAPNVFQLYQR ddPTM_KYSE-520_SHP099_60min_R1 4 SLPSHMEEAPNVFQLYQR 18 0 Q5THJ4-2;Q5THJ4;H3BLS7 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 S(0.935)LPS(0.065)HMEEAPNVFQLYQR;S(1)LPSHMEEAPNVFQLYQR;S(1)LPSHMEEAPNVFQLYQR;S(1)LPSHMEEAPNVFQLYQR 312.27 9.218299999999998e-48 966621000.0 508212.0 427957.0 363142.0 451999.0 476046.0 467076.0 447682.0 465149.0 530251.0 489561.0 True False 480020.4672644945 407397.3033434472 386550.7143677433 494956.8490615457 513508.1118687735 464160.80543095456 492938.0655152754 463535.5066855931 433970.7849399368 485223.87041269446 0.9892762836589751 0.8396068870168034 0.7966440604807276 1.0200587383315933 1.0582911171126488 0.9565910371148367 1.0158982184780394 0.9553023561914733 0.8943722916410405 1.0 18.888290999501436 -5.274695045579766 24.936633834750612 0.986984335719062 0.8716188544590872 0.4018208058633278 0.06178814471258362 722.0042799570357 1358237.0418250356 0.017968118419134354 0.026822780389191964 5.312573534392593e-06 5.274695045579766 -0.11536548125997481 S(ph)LPSHMEEAPNVFQLYQRPTSASR ddPTM_KYSE-520_SHP099_60min_R1 1 SLPSHMEEAPNVFQLYQRPTSASR 24 1 Q5THJ4-2;Q5THJ4;H3BLS7 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 S(0.999)LPS(0.001)HMEEAPNVFQLYQRPTSASR 94.721 0.0020983 157870000.0 7575.8 0.0 7300.6 5108.2 9232.3 0.0 0.0 0.0 9250.3 0.0 True False 7155.5552720171145 0.0 7771.208357373008 5593.6817921636675 9958.82948539862 0.0 0.0 0.0 7570.678701086649 0.0 0.0 S(ph)LPSS(ph)PERR ddPTM_KYSE-520_SHP099_60min_R1 1 SLPSSPERR 9 1 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 2 S(1)LPS(0.365)S(0.635)PERR 91.20200000000001 0.00229 0.0 264330.0 244180.0 292660.0 275940.0 288260.0 243710.0 238510.0 252570.0 303140.0 271840.0 True False 249667.0879712086 232449.22627834787 311525.33187255595 302165.254635614 310944.4220249569 242188.91549036544 262620.9184332817 251693.89362028096 248097.417537529 269431.7090883195 0.9266432997660565 0.862738936945804 1.1562311389653035 1.1214910659849782 1.1540750829852382 0.8988879457056634 0.9747216440185026 0.9341658206153304 0.9208174434145866 1.0 18.039560124243845 -6.287854807765491 24.973215684669146 0.9434166271622079 1.0446666785212453 0.22370250922537394 0.09170977874713634 1296.2164503109948 1225442.1272939527 0.035823558097602 0.03160178681226456 5.154009233174482e-07 6.287854807765491 0.10125005135903742 S(ph)LPSSPER ddPTM_KYSE-520_SHP099_60min_R1 1 SLPSSPER 8 0 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 1 S(0.96)LPS(0.035)S(0.005)PER 90.696 0.0043059 261780000.0 165450.0 167200.0 173610.0 148420.0 154120.0 170580.0 152930.0 155850.0 177710.0 174480.0 True False 156272.1586836019 159167.46102768354 184801.1783858213 162525.7921758998 166248.36717715373 169515.34694656185 168389.65685296958 155309.3927256635 145442.34370454014 172934.24294338582 0.9036507520072896 0.9203929673997002 1.0686210853354265 0.9398126675762333 0.9613386241357597 0.9802300808756353 0.9737207275258722 0.8980835147640931 0.8410268621706933 1.0 17.399864041700376 -7.2635268750314355 24.330902045647903 0.9021663857096599 0.9659113908069977 0.14128334814143761 0.055490348203319856 204.52187966181424 2383751.3944748123 0.028182105604459246 0.014597481792421901 5.4509616297895234e-08 7.2635268750314355 0.06374500509733783 S(ph)LPTTVPES(ph)PNYR ddPTM_KYSE-520_SHP099_60min_R1 9 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(0.998)LPT(0.002)TVPES(0.998)PNY(0.001)R;S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(1)LPTTVPES(1)PNYR;S(0.999)LPT(0.001)TVPES(1)PNYR;S(1)LPTTVPES(1)PNYR 301.88 3.2648999999999996e-34 33318100000.0 7469892.0 7630980.0 7862840.0 7623144.0 8311440.0 7595340.0 7332102.0 8326740.0 9596370.0 8425540.0 True False 7055522.199899472 7264376.266465499 8369691.247388814 8347645.313778175 8965503.042375302 7547934.665711673 8073302.424579686 8297856.482415729 7853911.11280142 8350896.270570927 0.8448820307783689 0.8698918093457355 1.0022506538470752 0.9996107056431525 1.0735977015988436 0.9038472543732892 0.9667587960624658 0.9936486113062961 0.9404872074006099 1.0 22.993499614302078 -4.710865168476568 5.675425204167907 0.984959343255463 0.8533234520252891 0.5953429608113822 0.04216682617743924 0.12946196498655876 9.052202081857814 0.011113797530807311 0.0297358726142839 1.9459641339302555e-05 4.710865168476568 -0.13163589123017383 S(ph)LPTTVPESPNYR ddPTM_KYSE-520_SHP099_60min_R1 9 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 S(0.996)LPT(0.001)T(0.003)VPESPNYR;S(0.971)LPT(0.028)TVPESPNYR;S(1)LPTTVPESPNYR;S(0.989)LPT(0.011)TVPESPNYR;S(1)LPTTVPESPNYR;S(1)LPTTVPESPNYR;S(1)LPTTVPESPNYR;S(1)LPTTVPESPNYR;S(1)LPTTVPESPNYR 252.37 1.9963e-16 69571200000.0 9339590.0 9889030.0 10463500.0 8219280.0 8437090.0 9546070.0 7753100.0 8168760.0 10693550.0 8573620.0 True False 8821504.324688915 9413946.155063355 11137993.952191938 9000437.899983363 9101040.982524594 9486489.43619513 8536859.010964222 8140424.478162925 8751870.88245843 8497664.396975417 1.0381092865739394 1.1078274823861098 1.310712383058608 1.0591660813513533 1.0710049911789807 1.1163643317770546 1.0046123984377116 0.9579602227007641 1.0299148652626824 1.0 23.018634936936305 -6.553722843308433 1.1733751031951887 0.9886598714688538 1.135277294515211 0.37371193225415544 0.07338640826363269 0.5155453712988285 1.4501216343442356 0.04579353610082603 0.031611426825902574 2.794326546895545e-07 6.553722843308433 0.14661742304635716 S(ph)LPVSICR ddPTM_KYSE-520_SHP099_60min_R1 6 SLPVSICR 8 0 O94885;A0A087WW74 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 S(1)LPVSICR;S(1)LPVSICR;S(1)LPVSICR;S(1)LPVSICR;S(1)LPVSICR;S(1)LPVSICR 177.58 6.1151e-05 6916350000.0 2199520.0 1761470.0 1889190.0 1726550.0 1932270.0 1902020.0 1827020.0 1933180.0 2200300.0 1806470.0 True False 2077508.2409655852 1676846.3371796256 2010970.2102108723 1890640.7928938132 2084328.655887613 1890148.787661503 2011713.0115968916 1926474.249787605 1800780.9850492368 1790466.0812123914 1.1603170050330285 0.9365418059437185 1.1231545971812933 1.0559489580576638 1.1641263008323712 1.0556741663498104 1.1235694619999088 1.0759624379385715 1.0057610160533512 1.0 20.771903757666955 -7.751445434945033 4.665771055669057 1.0001654602298669 1.0853307215138572 0.22752268915143636 0.06214055495358243 0.2739604614679294 14.55214399779429 0.049747562055832556 0.015113944974973204 1.7723707130121843e-08 7.751445434945033 0.08516526128399038 S(ph)LPVSVPVWGFK ddPTM_KYSE-520_SHP099_60min_R1 9 SLPVSVPVWGFK 12 0 Q96B36;Q96B36-3;Q96B36-2 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 1 S(1)LPVSVPVWGFK;S(1)LPVSVPVWGFK;S(1)LPVSVPVWGFK;S(1)LPVSVPVWGFK;S(1)LPVSVPVWGFK;S(1)LPVSVPVWGFK;S(1)LPVSVPVWGFK;S(1)LPVSVPVWGFK;S(1)LPVSVPVWGFK 258.78 6.1839e-25 60874474000.0 5219664.0 7371105.0 8928171.0 8236608.0 8867883.0 6152782.0 7843612.0 6990133.0 8353092.0 6995092.0 True False 4930118.832777786 7016986.051545821 9503695.188238692 9019412.7478935 9565734.940747717 6114380.205279406 8636520.847236214 6965885.860132298 6836381.057113529 6933120.926979223 0.7110966164736795 1.01209630200452 1.370767261718522 1.300916692913256 1.3797155770821856 0.881908778121292 1.2456902076564769 1.0047258562915837 0.9860467066874249 1.0 22.72507349344986 -7.382173179186524 8.250004521823604 0.9941103563288886 1.140347692920357 0.07925935406133733 0.20368798226366983 0.8162062241806025 51.708700730079755 0.11833314636963164 0.05648865614120808 4.1478860862420054e-08 7.382173179186524 0.14623733659146854 S(ph)LQAFQDYIR ddPTM_KYSE-520_SHP099_60min_R1 4 SLQAFQDYIR 10 0 O95786-2;O95786 O95786-2 DDX58 Probable ATP-dependent RNA helicase DDX58 1 S(1)LQAFQDYIR;S(1)LQAFQDYIR;S(1)LQAFQDYIR;S(1)LQAFQDYIR 171.95 4.0079e-05 794620000.0 369185.0 405256.0 374165.0 414884.0 418966.0 407062.0 381694.0 379431.0 499860.0 451251.0 True False 348705.57209794817 385786.8934583425 398284.2745851671 454314.4506205768 451936.2406095471 404521.375066018 420279.35449445737 378114.84242086153 409098.0244451717 447253.26720796514 0.7796602007511015 0.8625692012641201 0.890511716262034 1.0157878855903992 1.0104705180373885 0.9044570598473068 0.9396898475848018 0.8454154952993213 0.9146898512313116 1.0 18.770732495713464 -4.569256567562834 1.9165513471042546 0.9406498440983083 0.7772693527596033 0.505163757552764 0.05155286006336846 0.4177824919088821 2.489597376796935 0.015608090184422989 0.09790196581787872 2.6961461632475086e-05 4.569256567562834 -0.16338049133870503 S(ph)LQEEHVAVAQLR ddPTM_KYSE-520_SHP099_60min_R1 5 SLQEEHVAVAQLR 13 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 S(1)LQEEHVAVAQLR;S(1)LQEEHVAVAQLR;S(1)LQEEHVAVAQLR;S(1)LQEEHVAVAQLR;S(1)LQEEHVAVAQLR 147.17 5.294199999999999e-06 852284000.0 765041.0 744577.0 814273.0 697084.0 804160.0 663395.0 661030.0 717051.0 913609.0 760914.0 True False 722602.6506585762 708806.4032871373 866762.3404628655 763334.6537740532 867442.8169554893 659254.5057311191 727853.3634311019 714563.7174419619 747720.6358086851 754172.8939421334 0.9581392495843538 0.9398460339540166 1.1492886411393233 1.0121480895236508 1.1501909229610245 0.8741424029245245 0.9651014631758286 0.9474799786384119 0.9914445902454518 1.0 19.524535773314675 -6.2742097362279585 24.998544060072454 0.952942929133483 1.0405623154706392 0.26437415788858154 0.07188080305102093 1131.3466948118394 2214654.5786447455 0.025616652464268655 0.02273761892190359 5.318513473331294e-07 6.2742097362279585 0.08761938633715616 S(ph)LQEVLLEFSK ddPTM_KYSE-520_SHP099_60min_R1 1 SLQEVLLEFSK 11 0 Q9Y4G2 Q9Y4G2 PLEKHM1 Pleckstrin homology domain-containing family M member 1 1 S(1)LQEVLLEFSK 84.75299999999999 0.0039742 18619000.0 41493.0 36317.0 40802.0 38893.0 36995.0 39706.0 39383.0 45079.0 48255.0 39831.0 True False 39191.30057575519 34572.276807071634 43432.16220550826 42589.37902639315 39906.29602724373 39458.18012580715 43364.21798104035 44922.63147051771 39493.108409558205 39478.12832804908 0.9927345149215165 0.8757324187152039 1.100157582056641 1.0788094783139335 1.0108456939912835 0.9994947024317827 1.0984365221344652 1.1379118862279072 1.000379452677813 1.0 15.268765972285738 -4.765872634848135 24.99999963614745 1.057271583043522 0.9342334604276873 0.4342952407537751 0.054180764625897535 89.25444748086606 503335.15636703325 0.014188209984042273 0.03124046919654196 1.7144600319386927e-05 4.765872634848135 -0.12303812261583469 S(ph)LQLMDNR ddPTM_KYSE-520_SHP099_60min_R1 7 SLQLMDNR 8 0 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR;S(1)LQLMDNR 129.0 0.00082439 5335860000.0 4968100.0 4631340.0 4458850.0 4245030.0 4783430.0 4375600.0 4093660.0 4342710.0 4945440.0 4328210.0 True False 4692509.589338181 4408843.474616929 4746274.6054122485 4648476.374885189 5159858.727006308 4348290.257353597 4507487.103071519 4327646.152606136 4047472.76039717 4289865.426696426 1.0938593924499458 1.0277346807151773 1.1063924233789537 1.0835949179097968 1.2028020028077788 1.0136192688688053 1.0507292548201637 1.0088069722827657 0.9434964405198324 1.0 22.032500960339696 -6.984596754510638 1.4689736143892111 0.9776007124676707 1.0945313750497245 0.500329313199894 0.04838044936105189 0.36883387367541665 1.5415454233274046 0.0337966032546122 0.016337742638225607 1.0361037498308578e-07 6.984596754510638 0.11693066258205387 S(ph)LQLPASPAPDPSPR ddPTM_KYSE-520_SHP099_60min_R1 4 SLQLPASPAPDPSPR 15 0 A0A1B0GUN5;Q5VTI5;Q9Y2H5 A0A1B0GUN5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 S(1)LQLPASPAPDPSPR;S(1)LQLPASPAPDPSPR;S(1)LQLPASPAPDPSPR;S(1)LQLPASPAPDPSPR 118.21 0.00014165 3243440000.0 1467150.0 1424500.0 1172670.0 1175970.0 1116000.0 1413820.0 1314880.0 1598540.0 1710050.0 1760730.0 True False 1385764.2648089847 1356064.8817819096 1248262.1845383397 1287733.8352317277 1203822.8508285978 1404995.8249501009 1447800.9023921557 1592995.0378420397 1399548.0268524513 1745131.3020272094 0.7940744992650292 0.7770560760709835 0.7152826741966705 0.7379008294309134 0.6898179234022062 0.8050946214293477 0.8296229061448479 0.9128224540993319 0.8019729089878133 1.0 20.734904156852004 -6.849963400381874 1.6269615557655788 0.897512132346795 0.7433870820527421 0.6241990046167629 0.05378100004988023 0.26305885466320367 1.4050498612461166 0.031200913867509887 0.017514520106906302 1.4126565894537227e-07 6.849963400381874 -0.154125050294053 S(ph)LQQLAEER ddPTM_KYSE-520_SHP099_60min_R1 1 SLQQLAEER 9 0 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 S(1)LQQLAEER 98.94200000000001 0.0026917 587650000.0 203110.0 227140.0 187840.0 146000.0 174970.0 220720.0 156570.0 206160.0 235110.0 201550.0 True False 191843.08341025337 216227.8534559089 199948.46695462658 159875.79610349942 188739.14355688143 219342.40460807312 172397.62357594608 205444.87907810576 192419.95064078807 199764.4238035273 0.9603465910373274 1.0824142224071576 1.0009213009383509 0.8003216641855148 0.9448085898543703 1.0980053426520089 0.8630046346265486 1.028435770325978 0.9632343286011594 1.0 17.60794014979807 -9.24095617330838 15.127465102666172 0.9999966898158199 0.9718349672069752 0.009845299345311198 0.08625174450544196 0.0 0.0 0.08470174685092223 0.020543191114157675 5.741744019137323e-10 9.24095617330838 -0.028161722608844753 S(ph)LRLS(ph)AQK ddPTM_KYSE-520_SHP099_60min_R1 4 SLRLSAQK 8 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 2 S(1)LRLS(1)AQK;S(1)LRLS(1)AQK;S(1)LRLS(1)AQK;S(1)LRLS(1)AQK 126.95 0.00056028 5693540000.0 9419150.0 8760890.0 8499000.0 8079720.0 7724030.0 7295470.0 7654800.0 7950680.0 9572640.0 7876230.0 True False 8896650.972889997 8340003.694036009 9046859.13888081 8847614.15954361 8331867.217281016 7249936.265612804 8428621.88764866 7923100.946782658 7834489.882616786 7806452.729814212 1.1396534739667514 1.0683474277867684 1.158895013138204 1.1333718996021098 1.0673051519879386 0.9287107110665035 1.0796993435261928 1.0149425380522636 1.0035915355889489 1.0 22.89623570262601 -5.991043663327991 5.54762964232068 1.0094009357327225 1.12161213748066 0.6598676811557531 0.04043339906494202 0.10687950861916913 11.075305496380372 0.01278159703020203 0.013981105950391799 1.020836845114318e-06 5.991043663327991 0.11221120174793753 S(ph)LS(ph)DSESDDSK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 S(0.998)LS(0.99)DS(0.01)ES(0.001)DDSK 118.76 0.00025227 289180000.0 440520.0 450140.0 335860.0 403860.0 406340.0 418380.0 408360.0 403620.0 493270.0 428740.0 True False 416083.47744515113 428514.5987260847 357510.0729950004 442242.7329750635 438316.6462416599 415768.7352298193 449641.01400953735 402219.93642561574 403704.60232479114 424941.69715467276 0.9791542704120717 1.008407980660254 0.8413155860882059 1.0407139048397347 1.0314747862507803 0.9784135988859793 1.0581240132946388 0.9465296983534506 0.9500235091729499 1.0 18.696905388638186 S(ph)LS(ph)GS(ph)SPCPK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)LS(0.999)GS(0.764)S(0.237)PCPK 114.24 0.0024618 577010000.0 1515800.0 1303900.0 1103900.0 1312600.0 1246500.0 1338000.0 1157600.0 1300800.0 1545500.0 1247700.0 True False 1431715.5523276157 1241258.6868061973 1175059.1603024486 1437349.1093524194 1344592.458385167 1329649.045694102 1274621.5050872792 1296287.8284090038 1264876.1588845134 1236646.3486959112 1.1577404921280947 1.0037297147362703 0.9501982208103322 1.1622960039207302 1.0872893934495411 1.0752055727947327 1.0307081781557146 1.0482284040024754 1.022827714825966 1.0 20.2380015523145 -7.647200438084016 1.0508802842619613 1.0023700046014261 1.066956333460935 0.13109947438492608 0.06027555529345212 1.1917562816574883 2.5815046499004524 0.05846320878557966 0.02036633556513316 2.2531990627684802e-08 7.647200438084016 0.06458632885950899 S(ph)LS(ph)GSS(ph)PCPK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)LS(0.999)GS(0.195)S(0.805)PCPK 123.95 0.0015414 460620000.0 1593300.0 1407700.0 1256200.0 1328300.0 1327800.0 1306900.0 1267900.0 1359900.0 1639200.0 1290300.0 True False 1504916.4728351934 1340071.9789992224 1337176.6619910658 1454541.2326320445 1432290.3058514467 1298743.15233006 1396071.7055115423 1355182.8243030473 1341562.6008692947 1278868.9458382085 1.1767558182819324 1.047857157967738 1.0455931910322842 1.1373653550393275 1.1199664441868837 1.0155404559290673 1.0916456373850845 1.0596729467184147 1.0490227362507383 1.0 20.286436998612793 -7.415633266370118 0.01245347448650635 4.5519300828231136e-07 2.1184218639098837 0.3664999661311691 0.04227420864463499 754.1718730200687 9.571435052848043 812.7832461664158 813.3578287755912 3.840313983132853e-08 7.415633266370118 2.1184214087168756 S(ph)LS(ph)GSSPCPK ddPTM_KYSE-520_SHP099_60min_R1 3 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)LS(0.965)GS(0.02)S(0.015)PCPK;S(1)LS(0.598)GS(0.201)S(0.201)PCPK;S(0.995)LS(0.541)GS(0.288)S(0.176)PCPK 173.72 3.6259e-05 2886490000.0 8248300.0 7352300.0 7185700.0 7248200.0 7165800.0 7293500.0 7120700.0 7453400.0 9169600.0 6972900.0 True False 7790750.356421598 6999084.471972713 7648901.719526509 7937066.748749202 7729707.69217524 7247978.561113535 7840529.847334987 7427545.895036631 7504631.786805205 6911125.530834119 1.1272766384669206 1.0127271514236234 1.1067519589104247 1.148447776463881 1.1184441170528594 1.0487406904673544 1.1344794436672163 1.0747230479172305 1.0858769318142387 1.0 22.720489253240384 -8.619088410984006 1.1045466110163689 0.9998340481383309 1.0968691990638464 0.3528906550265005 0.03917564164115033 3.399754209075075 5.032942503312312 0.03901444642939353 0.011839428245098057 2.4038733845196885e-09 8.619088410984006 0.09703515092551551 S(ph)LS(ph)PGVSR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSPGVSR 8 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 S(1)LS(1)PGVSR 101.38 0.0046464 722780000.0 1804200.0 1539500.0 1553800.0 1581300.0 1714200.0 1622500.0 1653400.0 1731500.0 1901500.0 1604800.0 True False 1704117.4294164688 1465540.1091633872 1653960.4341679 1731586.2765648211 1849097.7875361852 1612373.3756641855 1820541.8076289792 1725493.8306351376 1556235.5329142031 1590582.720515507 1.0713793174266129 0.9213856596457972 1.039845594218358 1.0886489927437506 1.1625285272411947 1.0136997937093244 1.1445753711186692 1.0848186695225168 0.9784059092568465 1.0 20.60112397255917 -4.994843151894153 24.980548352513885 1.075082647689307 0.9924407553646493 0.15031229967395998 0.06541148982270947 207.34881790048462 1004401.7826071809 0.01647339564115117 0.03410506658252125 1.0119448583409343e-05 4.994843151894153 -0.08264189232465768 S(ph)LS(ph)PILPGR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSPILPGR 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 2 S(1)LS(1)PILPGR;S(1)LS(1)PILPGR 105.83 0.0016424 431290000.0 820190.0 689790.0 679620.0 685040.0 671460.0 653360.0 608380.0 569540.0 745630.0 603210.0 True False 774692.4256917713 656651.453004102 723429.3926304476 750145.9956352133 724300.0819152059 649282.1378884129 669880.9876166189 567564.3986716359 610242.3878026921 597866.0286902784 1.2957625764234497 1.098325413207709 1.2100192315914586 1.2547058364873627 1.211475560004474 1.0859993823545548 1.120453338156879 0.9493170232718806 1.0207008903642278 1.0 19.189462712375505 -6.760723680480959 1.3130653969859112 0.9890433859420459 1.209693757639038 0.72307377125694 0.05772082016686659 0.23634152751135523 0.8210985160715589 0.035900470601243475 0.020806931380322656 1.7349074801777916e-07 6.760723680480959 0.2206503716969922 S(ph)LS(ph)PKPR ddPTM_KYSE-520_SHP099_60min_R1 5 SLSPKPR 7 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 S(1)LS(1)PKPR;S(1)LS(1)PKPR;S(1)LS(1)PKPR;S(1)LS(1)PKPR;S(1)LS(1)PKPR 94.29700000000001 0.0042768 31903200000.0 33752100.0 28677100.0 27076600.0 28234700.0 27983200.0 28001200.0 28335100.0 28896600.0 32415500.0 26659100.0 True False 31879803.72985673 27299409.070795357 28822000.96009174 30918117.398927875 30185318.637371708 27826434.124282278 31199488.43192689 28796364.439117167 26529662.32825687 26422921.114465956 1.2065207927522916 1.0331715010816704 1.0907954058233305 1.170124880023235 1.142391430024212 1.0531172539075526 1.1807736281983552 1.0898251678672954 1.0040397204127622 1.0 24.655286632855184 -7.6945174628759405 3.8215257609561815 0.9990802719837892 1.120850378341664 0.46356994397160944 0.052079084575615255 0.19796756997388362 5.444371221859866 0.04200611272119665 0.013177083190142077 2.0206101821126754e-08 7.6945174628759405 0.12177010635787466 S(ph)LS(ph)PLGGR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSPLGGR 8 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 2 S(1)LS(1)PLGGR;S(1)LS(1)PLGGR 110.54 0.0011413 667530000.0 1221300.0 985280.0 938020.0 1080130.0 1066540.0 1030280.0 1097400.0 1165980.0 1140010.0 1042240.0 True False 1153552.0543988086 937945.6698645686 998486.2700850661 1182785.2304470746 1150470.6302175045 1023849.6403570395 1208335.9015918963 1161935.487521777 933012.9213134479 1033006.5644504502 1.1166938276064948 0.907976485477173 0.9665826960318025 1.1449929469483142 1.1137108609077853 0.9911356574018655 1.1697272245648502 1.124809393771777 0.9032013478150567 1.0 19.97841799145553 -5.236878596094827 24.61922365810544 1.0725881519071712 0.9881735423411513 0.09401806080869568 0.09116316685951872 1250.9745332896748 1253948.6638680883 0.02427719333257073 0.042025105011655205 5.795906942015947e-06 5.236878596094827 -0.08441460956601987 S(ph)LS(ph)PLGGRDDS(ph)PVSHR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSPLGGRDDSPVSHR 16 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 3 S(1)LS(0.95)PLGGRDDS(0.882)PVS(0.168)HR 150.69 2.4734e-05 0.0 147560.0 138050.0 123020.0 126030.0 124760.0 110280.0 128720.0 119750.0 155680.0 105210.0 True False 139374.5526464326 131417.87078272543 130950.06603895954 138007.85330769897 134577.90221270252 109591.70161371106 141732.2737861391 119334.61519986023 127412.43637343311 104277.9212521413 1.3365681917404986 1.2602655404393843 1.2557794062879877 1.323461876210589 1.2905694762297444 1.050957866226746 1.3591781662336186 1.1443900469718056 1.2218543949044895 1.0 16.670074203033593 -13.999999997051514 0.11968941554074797 0.1683929693559437 1.3719008299874202 0.5061712910950598 0.08136351837668515 126.93596036944557 0.9842182437241598 25.376588306192268 0.7696882184324886 1.0000000067891397e-14 13.999999997051514 1.2035078606314766 S(ph)LS(ph)PLIKFS(ph)PVEQR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSPLIKFSPVEQR 14 1 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 3 S(1)LS(1)PLIKFS(1)PVEQR 95.206 0.012825 14723000.0 39438.0 37218.0 32125.0 35820.0 37123.0 40241.0 34283.0 39336.0 44095.0 41476.0 True False 37250.295522296095 35429.99141464305 34195.82890181738 39224.3220303243 40044.36889902334 39989.840992358986 37748.66020983686 39199.55259709141 36088.45954449216 41108.554907839716 0.906144611646083 0.8618641908982863 0.8318421549597205 0.9541644584262416 0.9741127847670115 0.9727863478054933 0.9182677497290935 0.9535619212344474 0.8778819791986853 1.0 15.32715103717407 -5.274302690430043 24.67668950005567 0.948793943040634 0.8661417068391103 0.5363198832534972 0.03556073826541364 483.59144611916344 927710.2356408434 0.009996904035149183 0.014942932232822196 5.317375247326919e-06 5.274302690430043 -0.08265223620152373 S(ph)LS(ph)PPHKR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSPPHKR 8 1 X6R7H2;Q5VV67-2;Q5VV67 X6R7H2 PPRC1 Peroxisome proliferator-activated receptor gamma coactivator-related protein 1 2 S(1)LS(1)PPHKR 55.401 0.036057 373360000.0 1194900.0 1074600.0 1036900.0 1131400.0 1249000.0 1151300.0 1034800.0 1175700.0 1375100.0 1090800.0 True False 1128616.5150259058 1022974.6029925164 1103740.2330986594 1238927.9158321873 1347289.194162114 1144114.3096469482 1139407.6826747705 1171621.7711104427 1125416.5034500766 1081136.3606295593 1.043916897188342 0.9462031250126722 1.0209075129578822 1.1459497256301177 1.246178783014541 1.058251624226861 1.0538982168829092 1.0836947250837006 1.0409570378289121 1.0 20.044117066862253 -5.07772360464272 6.019702954082499 1.0966426066704391 0.9922154068427194 0.2560629622675683 0.06747029733578719 0.2817263925405589 17.145884072260326 0.019331781959937594 0.03431724628449828 8.361349851642687e-06 5.07772360464272 -0.10442719982771975 S(ph)LS(ph)PVAAPPLREPR ddPTM_KYSE-520_SHP099_60min_R1 4 SLSPVAAPPLREPR 14 1 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 2 S(1)LS(1)PVAAPPLREPR;S(1)LS(1)PVAAPPLREPR;S(1)LS(1)PVAAPPLREPR;S(1)LS(1)PVAAPPLREPR 119.23 7.2578e-05 2232180000.0 1832830.0 1684740.0 1629430.0 1623080.0 1712320.0 1724020.0 1473980.0 1717040.0 2176370.0 1554630.0 True False 1731159.2662439777 1603802.5615537025 1734465.66498018 1777337.035203205 1847069.8422319226 1713259.7516872524 1622984.283058524 1711083.9890001507 1781196.0698230262 1540857.1876838373 1.1235040340410756 1.0408508811673083 1.1256498518122684 1.1534729171590756 1.1987287705802077 1.111887438616271 1.0532996153252445 1.110475391669615 1.1559773897673529 1.0 20.555301723086 -9.28423427381213 8.409114729557862 1.000019638143628 1.1181148157863876 0.395837964521791 0.04419962353532707 0.0 0.0 0.046330571556662065 0.011236814130785587 5.19715567934988e-10 9.28423427381213 0.11809517764275967 S(ph)LS(ph)SSPQAQPPRPAELSDEEVAELFQR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSSPQAQPPRPAELSDEEVAELFQR 27 1 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 2 S(0.897)LS(0.712)S(0.201)S(0.19)PQAQPPRPAELSDEEVAELFQR 51.236000000000004 0.055148 657580000.0 108590.0 106950.0 123540.0 108920.0 105190.0 88216.0 88903.0 80103.0 138470.0 109190.0 True False 102566.29623120172 101811.96146477725 131503.58607098897 119271.72405200802 113467.85455077098 87665.41122193626 97890.1828496668 79825.14138918079 113327.33854463843 108222.66154853452 0.9477340028752101 0.94076379205586 1.2151206058817328 1.1020956456381212 1.048466679041008 0.8100467126528857 0.9045257384079958 0.7376009815964624 1.047168281791098 1.0 16.72364310188677 -6.239666127033449 20.533504155862907 0.8837595968883866 1.0566959381765582 0.3163077247675997 0.10953610938382251 92.05661268817292 86813.9888442755 0.036455777076426464 0.03638265841222964 5.758824889133274e-07 6.239666127033449 0.1729363412881716 S(ph)LSACNKR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSACNKR 8 1 Q96QB1-4;Q96QB1-1;Q96QB1-6;Q96QB1 Q96QB1-4 DLC1 Rho GTPase-activating protein 7 1 S(0.859)LS(0.141)ACNKR;S(0.852)LS(0.148)ACNKR 83.883 0.0069235 926370000.0 915460.0 924970.0 874120.0 849190.0 988730.0 950050.0 933190.0 1062670.0 1249080.0 1127950.0 True False 864677.6088757333 880533.0527917254 930467.1738414493 929896.762281717 1066537.4258958425 944120.3855468469 1027525.952256735 1058983.8457990414 1022278.5587443997 1117957.2405318222 0.7734442584444451 0.7876267721767677 0.8322922738966455 0.8317820472626993 0.9540055623133503 0.8445049160357156 0.9191102441162523 0.9472489710744871 0.914416510472344 1.0 20.092433578567523 -1.000000000778855 0.15682246641125627 1.0156551085046057 0.03288000575511147 0.7959650623761731 0.03284072085324289 27.23060370108912 0.2774646786791942 0.10133143643814485 6.153121616552837 0.09999999982066202 1.000000000778855 -0.9827751027494942 S(ph)LSAMDVEK ddPTM_KYSE-520_SHP099_60min_R1 5 SLSAMDVEK 9 0 Q6ZV73-2;Q6ZV73;F8VY01 Q6ZV73-2 FGD6 FYVE, RhoGEF and PH domain-containing protein 6 1 S(1)LSAMDVEK;S(0.992)LS(0.008)AMDVEK;S(0.996)LS(0.004)AMDVEK;S(0.991)LS(0.009)AMDVEK;S(0.974)LS(0.026)AMDVEK 199.68 2.2745e-06 2262010000.0 3373960.0 3112770.0 2777540.0 3207840.0 3327550.0 2954890.0 3171330.0 3542320.0 3539890.0 3302700.0 True False 3186799.712977492 2963227.856836975 2956584.6726211295 3512712.149127738 3589409.2538303793 2936447.4354492053 3491918.9855981707 3530032.5187037 2897135.2093650596 3273440.6474617184 0.9735321504755525 0.9052334152246544 0.9032039957448795 1.0730948037354993 1.0965249229778058 0.8970522919748604 1.066742721700442 1.078385985535112 0.8850428406611092 1.0 21.642376390196866 -5.248333017823245 24.896291370173273 1.0178848601899155 0.9251142047296215 0.23385542480641996 0.07146107943878718 1041.193126893139 1977802.8836986988 0.019297097112352245 0.0331357998396921 5.64503946125297e-06 5.248333017823245 -0.09277065546029406 S(ph)LSAPLHPEFEEVYR ddPTM_KYSE-520_SHP099_60min_R1 3 SLSAPLHPEFEEVYR 15 0 Q53HC0-2;Q53HC0 Q53HC0-2 CCDC92 Coiled-coil domain-containing protein 92 1 S(0.543)LS(0.457)APLHPEFEEVYR;S(0.558)LS(0.442)APLHPEFEEVYR;S(0.563)LS(0.437)APLHPEFEEVYR 126.19 5.18e-05 505940000.0 440160.0 353170.0 353160.0 353840.0 298916.0 359810.0 369840.0 388820.0 405370.0 354280.0 True False 415743.4473627933 336203.18308102264 375925.2586759792 387468.84721412434 322438.98860061023 357564.2923252574 407227.0364905664 387471.27417127 331765.0265461115 351141.3548256688 1.1839774542340578 0.957458238571579 1.0705809882820976 1.1034554656955489 0.9182597952915331 1.0182916008362997 1.15972394277724 1.10346237731992 0.9448190080340236 1.0 18.421692390588472 -2.229215732542506 0.0064743706119838275 3.3060798218739366e-08 2.160400959017173 0.06149784821312343 0.084708216780612 112020.04552975093 69.42194946594178 10715.192331965993 12511.663694478124 0.005899079749951967 2.229215732542506 2.160400925956375 S(ph)LSDIK ddPTM_KYSE-520_SHP099_60min_R1 7 SLSDIK 6 0 O14545;F8VNX8 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 S(0.989)LS(0.011)DIK;S(0.991)LS(0.009)DIK;S(0.999)LS(0.001)DIK;S(0.981)LS(0.019)DIK;S(0.988)LS(0.012)DIK;S(0.984)LS(0.016)DIK;S(1)LSDIK 118.74 0.008286799999999999 4931930000.0 12538840.0 10358840.0 9826710.0 10321310.0 10439500.0 10032950.0 10088580.0 11050800.0 12116440.0 9860040.0 True False 11843285.549642157 9861185.777464168 10460155.449891925 11302244.199185006 11261029.257370222 9970330.637516173 11108432.121452508 11012467.354076112 9916399.926596357 9772687.716595033 1.2118759846926281 1.0090556521844913 1.0703458202321865 1.1565133898623026 1.1522960299087253 1.0202240086507135 1.1366813760547412 1.1268616856932616 1.0147054949640195 1.0 23.22032396080597 -7.802001740129837 7.30028270255502 1.0053015633188667 1.1065408455794528 0.3232993047642233 0.05947508780305852 0.27952690750242415 38.81142741292566 0.054702547467426525 0.014588218851016693 1.5776049485438735e-08 7.802001740129837 0.1012392822605861 S(ph)LSDKEPSSGPEVSEEQALQLVCK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSDKEPSSGPEVSEEQALQLVCK 24 1 O95155-2;O95155;O95155-4;O95155-3 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 S(0.493)LS(0.493)DKEPS(0.007)S(0.007)GPEVSEEQALQLVCK 98.32600000000001 1.3227e-05 0.0 99141.0 101420.0 80641.0 88995.0 106080.0 118180.0 69393.0 82026.0 112400.0 99349.0 True False 93641.45109731636 96547.63096547646 85839.24789016203 97453.05804267769 114427.8924873635 117442.39478335498 76407.92165041597 81741.47095101225 91990.99337341925 98468.8451523523 0.9509754171731482 0.9804891162894893 0.8717401707854948 0.9896841776898777 1.1620720473599457 1.1926858144994648 0.7759603713458467 0.8301252119341987 0.934214199740939 1.0 16.58737971778446 -6.781375504545232 24.999995405568225 0.8709187506495158 1.0203148764645769 0.29297256734194765 0.10514902506826294 333.6100016226645 418344.55766180676 0.048202418329974565 0.032544677540749516 1.654338951889496e-07 6.781375504545232 0.149396125815061 S(ph)LSDLFR ddPTM_KYSE-520_SHP099_60min_R1 7 SLSDLFR 7 0 O75410;O75410-9;O75410-2;O75410-7;O75410-3;E7EVI4;E7ET87;H0YAY0;O75410-6;O75410-10;B4E3H6;H0YBT8;O75410-4;O75410-5;O75410-8 O75410 TACC1 Transforming acidic coiled-coil-containing protein 1 1 S(0.925)LS(0.075)DLFR;S(0.862)LS(0.138)DLFR;S(0.992)LS(0.008)DLFR;S(0.982)LS(0.018)DLFR;S(0.991)LS(0.009)DLFR;S(0.976)LS(0.024)DLFR;S(0.991)LS(0.009)DLFR 150.35 0.0013402999999999998 6042630000.0 1918840.0 1698310.0 1385750.0 1842620.0 1718930.0 1424410.0 1244350.0 1675320.0 1973690.0 1319200.0 True False 1812398.1200872937 1616720.6383847203 1475077.6622783928 2017742.0507960971 1854200.0116261675 1415519.7288319373 1370141.0416856888 1669508.7059426294 1615317.6486760129 1307512.9143220708 1.3861416588967304 1.236485407276432 1.1281553291909183 1.5431909151293326 1.4181121970696153 1.0826047783748787 1.0478986682866456 1.2768582915360718 1.2354123855927917 1.0 20.318393765384457 -6.265760690045739 24.99112973520728 1.140817455056072 1.3357826772633408 0.40783824021474135 0.12830000612587092 462.67258314841797 2675732.2605988104 0.04753762479884153 0.04336760122175214 5.422996322838441e-07 6.265760690045739 0.19496522220726886 S(ph)LSDSESDDSK ddPTM_KYSE-520_SHP099_60min_R1 6 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 S(1)LSDSESDDSK;S(0.999)LS(0.001)DSESDDSK;S(0.582)LS(0.411)DS(0.007)ESDDSK;S(0.95)LS(0.033)DS(0.017)ESDDSK;S(1)LSDSESDDSK;S(0.924)LS(0.076)DSESDDSK 260.77 2.4457e-20 10241270000.0 12915500.0 11575900.0 10919000.0 11243500.0 11640900.0 12195900.0 12269100.0 13116300.0 15044400.0 12539600.0 True False 12199051.468589049 11019776.388219863 11622856.211017694 12312078.859518453 12556972.60233926 12119780.864260612 13509380.362876916 13070802.61666742 12312716.198461445 12428508.899661181 0.9815378149603781 0.8866531357209132 0.9351770437509643 0.9906320186047498 1.0103362119877133 0.9751596882704903 1.0869671069910245 1.05167906481716 0.990683299007583 1.0 23.56714988480921 -5.523816050162509 1.5351702935170657 1.0267546787320694 0.927524475292109 0.505068049226141 0.037020842800824544 0.30641226696073365 1.4612542391867354 0.01302939640144344 0.02223676509986317 2.993532309126311e-06 5.523816050162509 -0.09923020343996036 S(ph)LSELESLK ddPTM_KYSE-520_SHP099_60min_R1 4 SLSELESLK 9 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 S(0.983)LS(0.017)ELESLK;S(1)LSELESLK;S(1)LSELESLK;S(0.993)LS(0.007)ELESLK 187.42 5.725e-06 273559000.0 418624.0 355622.0 336096.0 382504.0 374260.0 418500.0 395500.0 440778.0 417382.0 388377.0 True False 395402.0922137449 338537.3853204954 357761.2859326132 418857.0651559788 403712.13275189186 415887.9862653075 435480.99970803264 439249.0439963589 341595.95014398947 384936.2819327342 1.0271884225318089 0.8794634364438871 0.9294039110481415 1.0881205145249782 1.0487765162714349 1.0804073447614948 1.131306712688961 1.1410954607628168 0.887409075675755 1.0 18.55426013232897 -5.257260851971376 24.85618255736141 1.0638722058108963 0.9387630657297796 0.29097297460076943 0.07631650930792748 361.23260626537996 2148801.1069168653 0.02056223323268241 0.03403901350149096 5.5301784819688034e-06 5.257260851971376 -0.12510914008111662 S(ph)LSELESLKLPAESNEK ddPTM_KYSE-520_SHP099_60min_R1 7 SLSELESLKLPAESNEK 17 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 S(0.986)LS(0.01)ELES(0.004)LKLPAESNEK;S(1)LSELESLKLPAESNEK;S(1)LSELESLKLPAESNEK;S(1)LSELESLKLPAESNEK;S(0.99)LS(0.01)ELESLKLPAESNEK;S(0.968)LS(0.032)ELESLKLPAESNEK;S(0.997)LS(0.003)ELESLKLPAESNEK 264.64 9.8523e-30 3383734000.0 3297710.0 2998930.0 2701880.0 2629670.0 2826280.0 2914620.0 2658380.0 3079820.0 3565300.0 2722000.0 True False 3114779.452478098 2854856.9013143014 2876047.507960851 2879593.046160886 3048692.156666532 2896428.7754566073 2927114.9936885936 3069136.8232553927 2917931.393899034 2697885.197683957 1.1545263138520612 1.0581832406230998 1.066037765591301 1.0673519572415162 1.1300303509147576 1.0735923003480998 1.084966475297549 1.1376083852234122 1.0815624758251312 1.0 21.363397528338346 -8.034454752441716 23.447322599479357 0.9999999988673943 1.0942569777011422 0.44920398362984293 0.031821898961492796 2241.4640023777006 1525370.6272747235 0.03034540750125843 0.007835150506190961 9.23730423510516e-09 8.034454752441716 0.09425697883374784 S(ph)LSGSS(ph)PCPK ddPTM_KYSE-520_SHP099_60min_R1 3 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.999)LS(0.004)GS(0.439)S(0.558)PCPK;S(1)LS(0.082)GS(0.433)S(0.485)PCPK;S(1)LSGS(0.115)S(0.885)PCPK 180.47 1.378e-05 2657130000.0 8145600.0 7203700.0 7218300.0 7022600.0 7251800.0 7487300.0 6795200.0 7152200.0 8484400.0 6770200.0 True False 7693747.330148973 6857623.439025857 7683603.167688349 7690025.792578315 7822475.402902175 7440568.983427082 7482125.130761118 7127390.687536032 6943846.83431884 6710221.295135902 1.1465713263027566 1.0219668081582947 1.1450595784759037 1.1460167190242523 1.1657552052079896 1.1088410733667746 1.1150340356412318 1.0621692451041111 1.034816368776435 1.0 22.677928914904722 -7.589370425502269 1.4330722063012382 1.0035781362730645 1.1223197070675015 0.5695703078411563 0.037358563037265556 0.31744723923251184 1.1864724610111352 0.03575000320923291 0.011575558854054478 2.5741246561936815e-08 7.589370425502269 0.11874157079443703 S(ph)LSGSSPCPK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.99)LS(0.01)GSSPCPK 147.28 0.00012731 591400000.0 1866000.0 1698100.0 1590800.0 1490000.0 1611700.0 1651700.0 1701600.0 1715800.0 2071600.0 1736600.0 True False 1762489.2602212203 1616520.727099936 1693345.5133699942 1631609.1520151668 1738531.6206814095 1641391.127632992 1873614.3340156479 1709848.2902707316 1695449.6607862571 1721215.0750543545 1.0239796791028932 0.9391741627924608 0.9838082049778235 0.9479403101112405 1.0100606518488158 0.9536234904177553 1.088541671038107 0.9933960694695496 0.985030682892849 1.0 20.714995950448643 S(ph)LSIEIGHEVK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSIEIGHEVK 11 0 A0A3B3IU16;C9JTT8;Q68DU7;H7C1N3;O15155-2;O15155 A0A3B3IU16 BET1;DKFZp781C0425 BET1 homolog 1 S(0.607)LS(0.393)IEIGHEVK 162.72 1.2812e-05 297630000.0 366370.0 539750.0 441610.0 712640.0 619130.0 692460.0 673190.0 974170.0 982520.0 560780.0 True False 346046.72575951193 513819.59981873253 470076.88720098295 780369.0913369707 667852.0086321768 688138.1002850056 741242.6149012655 970790.8316429872 804119.1353136281 555811.925480238 0.6225967991969896 0.9244486781653293 0.8457481130776792 1.404016458737744 1.2015791277870347 1.2380772501245523 1.333621286122657 1.7466174926063256 1.4467468192929565 1.0 19.084237263719125 -4.809215990842915 0.7179101004860544 1.41214392840882 0.4674748396407425 0.5941955919831882 0.2004185312379161 1.057787054756077 0.6751337515294983 0.09279961895182645 0.7223675572197954 1.551615141956852e-05 4.809215990842915 -0.9446690887680775 S(ph)LSKSDSDLLTCSPTEDATMGSR ddPTM_KYSE-520_SHP099_60min_R1 3 SLSKSDSDLLTCSPTEDATMGSR 23 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.371)LS(0.371)KS(0.255)DS(0.003)DLLTCSPTEDATMGSR;S(0.333)LS(0.333)KS(0.333)DS(0.001)DLLTCSPTEDATMGSR;S(0.296)LS(0.296)KS(0.296)DS(0.112)DLLTCSPTEDATMGSR 115.66 3.7052e-05 2275210000.0 939760.0 980000.0 846430.0 794670.0 835940.0 883180.0 773270.0 814340.0 1093620.0 758020.0 True False 887629.6394348845 932919.3289900107 900992.2321358848 870195.1978737522 901723.7221520232 877667.7460210128 851439.6779879411 811515.2446083856 895046.1759167134 751304.5325306356 1.1814511972196708 1.2417325978956069 1.199237051187556 1.1582456383467494 1.2002106777057864 1.1681917358660745 1.1332817001915563 1.0801415530862577 1.1913227421933816 1.0 19.519038280335476 -13.99999977351825 0.10267035897659313 0.4259739707831348 1.2878968441616954 0.7221647071196375 0.03489473038299694 89.83804618588425 0.6227544512721929 10.869698803948028 0.5311520720093132 1.000000521493639e-14 13.99999977351825 0.8619228733785606 S(ph)LSLPILR ddPTM_KYSE-520_SHP099_60min_R1 3 SLSLPILR 8 0 A0A5F9ZHW8;O94827-5;O94827-3;O94827;O94827-7;O94827-2;O94827-6;Q5SY18;O94827-4 A0A5F9ZHW8 PLEKHG5 Pleckstrin homology domain-containing family G member 5 1 S(0.927)LS(0.073)LPILR;S(0.989)LS(0.011)LPILR;S(0.909)LS(0.091)LPILR 131.06 0.00079526 128306000.0 157369.0 174427.0 147052.0 174497.0 188934.0 188473.0 186183.0 256682.0 304072.0 218712.0 True False 148639.42786267606 166047.26509973538 156531.20721151898 191081.14241556407 203802.0309125901 187296.67009649033 205004.1946109751 255791.63005202892 248860.18983133766 216774.381835361 0.6856872412883498 0.7659911826013066 0.7220927394012988 0.8814747425306426 0.9401573617097275 0.8640166264606911 0.9457030525252504 1.1799901256150338 1.1480147595131682 1.0 17.725834745045134 -6.1314771452116945 0.6033267604151877 1.1161628868754903 0.6973782302394179 0.7747309583613922 0.07489641784503996 0.41440354552904346 0.3308464988801678 0.06291179491707259 0.08067308806432294 7.387931410297727e-07 6.1314771452116945 -0.41878465663607234 S(ph)LSMDSQVPVYSPSIDLK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSMDSQVPVYSPSIDLK 18 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.499)LS(0.499)MDS(0.002)QVPVYSPSIDLK 157.11 6.2407e-07 114000000.0 252250.0 337690.0 223170.0 193930.0 206690.0 298620.0 230130.0 299340.0 338020.0 352660.0 True False 238257.18965209182 321466.8655169761 237555.89528462512 212361.0488928192 222955.32709476992 296756.2018125353 253393.78625236326 298301.65940648137 276644.08879077516 349535.7067653286 0.6816390572996681 0.9196967843196708 0.6796326975661903 0.607551803099173 0.6378613766188349 0.8490011065214907 0.7249439223171751 0.8534225649419996 0.7914615973025857 1.0 18.415080315851473 -8.201998127519655 0.6319793372562023 1.0007103029457451 0.7214457794931847 0.44432684328286853 0.09148518262287819 1.0534036106921667 0.9125755578337329 0.10302752667380337 0.04062583226633538 6.280610667212391e-09 8.201998127519655 -0.2792645234525605 S(ph)LSPDEER ddPTM_KYSE-520_SHP099_60min_R1 1 SLSPDEER 8 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.853)LS(0.147)PDEER 96.331 0.026236000000000002 0.0 1119800.0 1307100.0 1230000.0 1117300.0 1312300.0 1235900.0 1335900.0 1161800.0 1346300.0 1306300.0 True False 1057682.4617340441 1244304.9540028996 1309287.7680695842 1223487.8560715052 1415570.5440343807 1228186.2896661726 1470945.8091275888 1157769.9869661578 1101845.8574611596 1294727.19828602 0.8169153031883633 0.9610557001120621 1.0112460522979974 0.9449773339829252 1.0933349866352813 0.9486062324882529 1.1361048188953238 0.8942192521319022 0.8510254970466368 1.0 20.304216720409773 -4.272935444485535 3.394900566164174 0.9877674644270033 0.7969651009045551 0.27883104111694546 0.08043799952644036 0.3895493960436209 7.667055804492496 0.020569717988712714 0.18999242318081708 5.334141787136725e-05 4.272935444485535 -0.19080236352244817 S(ph)LSPGVSR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSPGVSR 8 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.5)LS(0.5)PGVSR;S(0.5)LS(0.5)PGVSR 93.598 0.0076925 835060000.0 3228000.0 2792200.0 2579500.0 2368900.0 2591700.0 2956000.0 2606500.0 2825000.0 3232600.0 2723800.0 True False 3048936.405141533 2658058.520822353 2745778.697345927 2594039.543764245 2795652.0452441555 2937550.5075274743 2869990.456988593 2815200.7343599577 2645641.327214546 2699669.2510843305 1.1293740534759649 0.9845867303021419 1.0170796649415763 0.9608730931473702 1.0355535383163228 1.0881149631006088 1.0630896565702828 1.042794680581417 0.9799872062668107 1.0 21.36435123621163 -7.758233868646749 24.99372090577474 0.9899935923940041 1.0371232294211399 0.15853102663101581 0.04582076503136282 158.77137890825946 1238037.7400058175 0.035265331450912554 0.012055189306257943 1.744882276482517e-08 7.758233868646749 0.047129637027135796 S(ph)LSPILPGR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSPILPGR 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 S(0.5)LS(0.5)PILPGR 90.149 0.008815100000000001 598940000.0 2797200.0 2841600.0 2597700.0 2447900.0 2747000.0 2283700.0 2231400.0 2716100.0 3277300.0 2350200.0 True False 2642033.7399200457 2705085.2706714426 2765151.8984669545 2680547.6800120315 2963173.271708031 2269446.581204495 2456971.6883653696 2706678.4830425065 2682224.9340098444 2329379.0564279333 1.1342223296072576 1.1612902860128094 1.1870768266918619 1.150756323928923 1.272087195740487 0.9742710508802531 1.054775383845469 1.161974250422409 1.151476367321253 1.0 21.151513995618892 -6.257969071442375 24.99863495321023 1.0777650516036854 1.178634568963861 0.42841761778890364 0.0645496925225417 356.753254788121 2569908.4033076293 0.022615333266376363 0.021792437310912186 5.521167572265807e-07 6.257969071442375 0.10086951736017569 S(ph)LSQPTPPPMPILSQSEAK ddPTM_KYSE-520_SHP099_60min_R1 2 SLSQPTPPPMPILSQSEAK 19 0 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5;H0Y314 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 S(0.883)LS(0.117)QPTPPPMPILSQSEAK;S(0.84)LS(0.16)QPTPPPMPILSQSEAK 173.49 5.7245e-09 402440000.0 395860.0 492400.0 317210.0 287650.0 285810.0 411340.0 329230.0 410490.0 449130.0 495490.0 True False 373900.85667265404 468744.36489253206 337657.8641539452 314988.169514874 308301.62096354953 408772.6744811744 362511.78137515933 409066.1059990862 367579.3136459408 491100.3440853871 0.7613532777481505 0.9544777773786938 0.687553711213114 0.641392687479175 0.6277772448677931 0.8323607983669046 0.7381623445006786 0.8329582964575613 0.748481075350316 1.0 18.905658307782716 -9.150441002673437 0.6472120640488563 1.015405968723498 0.75022839366165 0.38295679135732164 0.09239484036488081 7.170438806140364 3.020350061155605 0.3882511719041564 0.03861948897577656 7.072272684093363e-10 9.150441002673437 -0.265177575061848 S(ph)LSQSFENLLDEPAYGLIQK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSQSFENLLDEPAYGLIQK 20 0 Q8TC07-2;Q8TC07-3;C9JA93 Q8TC07-2 TBC1D15 TBC1 domain family member 15 1 S(0.366)LS(0.366)QS(0.267)FENLLDEPAYGLIQK 93.684 0.00091279 99744000.0 26376.0 34520.0 19939.0 17598.0 20886.0 28257.0 15655.0 27449.0 29504.0 15343.0 True False 24912.870700747568 32861.60738442363 21224.29984352799 19270.508628968368 22529.60937491587 28080.63758159807 17237.56017807649 27353.785825644743 24146.817335314598 15207.072956673366 1.6382423344536514 2.1609423113869437 1.3956860668715387 1.267206955860091 1.4815217523520288 1.8465511187855093 1.1335225540896796 1.7987541654846206 1.5878675274401295 1.0 13.89245487072698 -11.984500272221224 0.22124704824430153 7.798292872384409e-33 1.6757761678418313 0.27950775954246787 0.28319516877424045 81.48817485147617 1.8093533039355707 40.05129761975031 0.5916659124192826 1.036333954843728e-12 11.984500272221224 1.6757761678418313 S(ph)LSS(ph)PTVTLSAPLEGAK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 2 S(0.981)LS(0.028)S(0.947)PT(0.045)VTLSAPLEGAK 183.31 7.2652e-10 0.0 185840.0 196970.0 179020.0 166530.0 191800.0 168340.0 195260.0 184500.0 201560.0 163930.0 True False 175531.08473714456 187507.26554200225 190559.9156421275 182356.9611309298 206893.56880728045 167289.32761744744 214998.78635395796 183860.01256262368 164961.78491411358 162477.70773561008 1.0803394950818448 1.1540491809936242 1.1728372974846117 1.122350651497792 1.2733658770220069 1.0296140310501365 1.3232509822443592 1.1316014678260216 1.0152887261466397 1.0 17.309882265528937 -7.726609595279995 4.2754745709172655 1.0027112156294546 1.1661607052629888 0.37292543530172084 0.0803575819753776 0.1978806011212041 7.625830903386147 0.06243056775223138 0.01944270546937494 1.8766807736087645e-08 7.726609595279995 0.16344948963353412 S(ph)LSS(ph)SPQAQPPRPAELSDEEVAELFQR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSSPQAQPPRPAELSDEEVAELFQR 27 1 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 2 S(0.78)LS(0.234)S(0.557)S(0.429)PQAQPPRPAELSDEEVAELFQR 83.56700000000001 2.1763e-05 0.0 109230.0 102850.0 87073.0 90620.0 82370.0 98757.0 71865.0 68475.0 99713.0 93962.0 True False 103170.79415539338 97908.93161900266 92685.86490172593 99232.49755410351 88852.05037880981 98140.62093095096 79129.81553481112 68237.47620718507 81607.6327601756 93129.5697813299 1.10781993729425 1.0513194879874865 0.99523561763846 1.0655315791440183 0.954069159638944 1.053807304826889 0.8496744451908187 0.7327154669285817 0.8762805728813304 1.0 16.506951693451704 -6.766510609425919 24.305148108587108 0.8423938319472765 1.0340684246378478 0.5686688830248161 0.07286609448652391 58.24816594508058 279163.84970851574 0.02883995817520179 0.020133588091605176 1.7119433549464018e-07 6.766510609425919 0.1916745926905713 S(ph)LSS(ph)SPVKK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 2 S(0.996)LS(0.006)S(0.812)S(0.186)PVKK 149.23 0.00019755 1906100000.0 2452100.0 2212700.0 2117900.0 2197800.0 2221700.0 1951300.0 2104000.0 2301300.0 2580000.0 2131000.0 True False 2316077.1248598355 2106398.5706695872 2254423.2227598154 2406678.2512073335 2396535.1502561774 1939121.2129020141 2316692.8530611927 2293317.327427459 2111537.03650731 2112120.997892912 1.0965646036237477 0.9972906726323759 1.0673740874736184 1.1394604066756957 1.13465807718734 0.9180919155846254 1.0968561248964264 1.085788801737832 0.9997235189716003 1.0 21.010261054617054 S(ph)LSSLR ddPTM_KYSE-520_SHP099_60min_R1 9 SLSSLR 6 0 O94915;H0Y9X0;A0A2C9F2R7;A0A286YEZ9;C9J1G1;Q70YC5-2;Q70YC5;Q70YC5-4;Q70YC5-3;Q8TF61 O94915;Q8TF61 FRYL;ZNF365;FBXO41 Protein furry homolog-like;Protein ZNF365;F-box only protein 41 1 S(1)LSSLR;S(0.999)LS(0.001)SLR;S(0.999)LS(0.001)SLR;S(0.991)LS(0.008)SLR;S(1)LSSLR;S(1)LSSLR;S(1)LSSLR;S(1)LSSLR;S(0.999)LS(0.001)SLR 178.87 0.0024031 33461590000.0 7616170.0 5863210.0 5969270.0 6087320.0 6651680.0 6240590.0 6151000.0 5976420.0 6939250.0 6300930.0 True False 7193685.867641515 5581532.590742373 6354058.6953696925 6665857.062580503 7175129.373117889 6201640.162980674 6772803.10797499 5955689.193926918 5679257.124257116 6245108.6622493565 1.151891225068052 0.8937446716470778 1.0174456585165477 1.0673724706944654 1.1489198605126527 0.9930395928046148 1.0844972400425086 0.9536566160854926 0.9093928434884216 1.0 22.574295243659318 -7.282250937958057 20.210750152100886 0.9486431637354681 1.045817448013046 0.2608575204183651 0.07400157915873531 102.33398609828974 99374.35579065277 0.040201541335763466 0.019392634867832385 5.22094432532705e-08 7.282250937958057 0.0971742842775779 S(ph)LSSS(ph)PQAQPPRPAELSDEEVAELFQR ddPTM_KYSE-520_SHP099_60min_R1 3 SLSSSPQAQPPRPAELSDEEVAELFQR 27 1 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 2 S(0.809)LS(0.419)S(0.301)S(0.471)PQAQPPRPAELSDEEVAELFQR;S(0.987)LS(0.015)S(0.41)S(0.587)PQAQPPRPAELSDEEVAELFQR;S(0.983)LS(0.027)S(0.219)S(0.771)PQAQPPRPAELSDEEVAELFQR 132.76 1.9696e-05 1466750000.0 539984.0 531345.0 507927.0 436424.0 486745.0 497340.0 411686.0 513170.0 621891.0 435694.0 True False 510030.0110885828 505818.3886348952 540668.7871319344 477901.60574434005 525049.0622997904 494235.9165810947 453303.23854816984 511389.9330447779 508971.27099634317 431834.0901248026 1.1810786196642815 1.1713257480175099 1.252028960880967 1.1066787376749798 1.215858299070479 1.14450416927079 1.0497161963687547 1.1842277965988817 1.1786268908257045 1.0 18.720117612453738 -6.517710865463373 24.841314011046098 1.1154400588557587 1.1835653552895846 0.27433466548997143 0.061780259957625296 336.17549609420126 1615964.087728576 0.02255982558628631 0.01800449816211707 3.0359116906132226e-07 6.517710865463373 0.06812529643382592 S(ph)LSSS(ph)PVKK ddPTM_KYSE-520_SHP099_60min_R1 6 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 2 S(0.976)LS(0.061)S(0.203)S(0.76)PVKK;S(0.988)LS(0.012)S(0.082)S(0.918)PVKK;S(0.773)LS(0.203)S(0.038)S(0.986)PVKK;S(0.988)LS(0.012)S(0.036)S(0.963)PVKK;S(0.998)LS(0.062)S(0.043)S(0.897)PVKK;S(0.998)LS(0.002)S(0.009)S(0.991)PVKK 179.6 3.1644000000000004e-05 17148220000.0 44817800.0 39939000.0 38073100.0 37952600.0 38024800.0 35673400.0 36469300.0 36228700.0 43264800.0 34959000.0 True False 42331667.29193066 38020270.49033882 40527352.945113905 41559603.69313475 41017135.4284832 35450749.078224115 40155972.75006866 36103031.09554214 35409002.93685326 34649290.45769042 1.221718157363743 1.0972885732469655 1.1696445269088864 1.1994359233382392 1.1837799529709978 1.0231305925733845 1.1589262642795628 1.0419558559107251 1.0219257730570417 1.0 25.046322473611475 -7.080720103561417 0.6865106103108175 0.9968954865652558 1.1724131513893588 0.6024832332451304 0.050454000912751665 0.5091505193313653 0.46411675797804963 0.046217704540719926 0.02518782144337234 8.303857665719463e-08 7.080720103561417 0.17551766482410291 S(ph)LSSSLDDTEVKK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSSLDDTEVKK 13 1 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 S(0.996)LS(0.003)S(0.001)S(0.001)LDDTEVKK 57.288000000000004 0.033194 349610000.0 159800.0 138880.0 109240.0 126820.0 90929.0 132860.0 110600.0 145940.0 187200.0 104850.0 True False 150935.5754465977 132207.99633686995 116281.78519017994 138872.9346701765 98084.59498476124 132030.77145808548 121780.52735198094 145433.76820265202 153209.19892797226 103921.11057206577 1.4524053353137427 1.2721957608910288 1.1189428649296667 1.3363303558411534 0.9438370552895785 1.2704903818991293 1.1718555227287557 1.3994631831979762 1.4742836954357497 1.0 16.665129228043583 -4.304674695280589 3.7357321557678373 1.2225176462973961 1.4672820306834498 0.1669858081040817 0.15838149597431075 0.4353207228892408 11.166327161099382 0.04007502482790477 0.2703184980279572 4.958214427305771e-05 4.304674695280589 0.24476438438605364 S(ph)LSSSPDKR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSSPDKR 9 1 Q9BVI0;Q5JWZ0;Q5JXL1;B0QYY0;Q9BVI0-2 Q9BVI0 PHF20 PHD finger protein 20 1 S(0.352)LS(0.352)S(0.227)S(0.07)PDKR 91.469 0.0025517 1398700000.0 1374200.0 1298700.0 1324400.0 1124200.0 1380900.0 1240900.0 1284500.0 1205800.0 1531600.0 1364600.0 True False 1297970.386600216 1236308.5026115563 1409772.9431149247 1231043.6299969465 1489568.9737537738 1233155.0828115158 1414349.7955119293 1201617.3612358342 1253500.0484940296 1352510.705642734 0.959674759826319 0.9140840789308529 1.042337733249201 0.9101914128006371 1.1013361798462864 0.9117525485504393 1.0457217008421449 0.8884346395356679 0.9267949179731978 1.0 20.367208582907914 -9.400347897930208 6.53876893548929 0.9999999988099245 0.9680835943639766 0.020499526601818974 0.06845265709664618 4.9529068938805697e-11 0.0 0.06249049614901781 0.015156171429410318 3.9778838869642084e-10 9.400347897930208 -0.0319164044459479 S(ph)LSTLVILCWK ddPTM_KYSE-520_SHP099_60min_R1 2 SLSTLVILCWK 11 0 Q8N945 Q8N945 PRELID2 PRELI domain-containing protein 2 1 S(0.995)LS(0.003)T(0.003)LVILCWK;S(0.997)LS(0.002)T(0.002)LVILCWK 73.781 0.019190000000000002 288710000.0 308100.0 413410.0 382950.0 416040.0 420990.0 400670.0 417310.0 386770.0 469280.0 427460.0 True False 291009.078817877 393549.1630589394 407635.5697416644 455580.3165130132 454119.51789456245 398169.2699090095 459495.76735311997 385428.3851427965 384070.58158610435 423673.03695884784 0.6868718408581268 0.928898298281761 0.9621465946185733 1.0753110931561702 1.0718631545548931 0.9398031858885664 1.0845527736468905 0.9097307393206472 0.9065259010650939 1.0 18.69259179128227 -4.189934089910757 1.9273109550650787 0.9981657919735034 0.5525623905100481 0.6823402578124891 0.06280458209473977 0.5865439320573418 1.9792177067974104 0.017686923573745714 0.4952599271727762 6.457522232734772e-05 4.189934089910757 -0.44560340146345534 S(ph)LSTNGENMGLAVQYLDPR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSTNGENMGLAVQYLDPR 19 0 J3KRN4;J3QRB6;Q99759;Q99759-2 J3KRN4 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 1 S(0.484)LS(0.484)T(0.032)NGENMGLAVQYLDPR;S(0.495)LS(0.495)T(0.01)NGENMGLAVQYLDPR 76.768 0.0082373 284730000.0 91358.0 93010.0 67885.0 61415.0 68164.0 85010.0 74566.0 107611.0 106179.0 89937.0 True False 86290.18962234218 88541.65998914366 72260.97571984034 67251.86313490693 73528.11899989293 84479.42105714153 82103.85897403068 107237.7225575962 86899.57015477106 89140.22814992726 0.9680274710224935 0.9932850950327741 0.8106438273671762 0.75445020200974 0.8248589949335118 0.9477137630279945 0.9210640434522791 1.2030227517168823 0.9748636721976123 1.0 16.443789033010084 -7.073459146825709 7.083100508788586 1.067339581034167 0.8809045620189655 0.43641436168689374 0.08960321080160709 0.2526031570708188 20.97086735816074 0.044973674599734066 0.025947357387151825 8.443856677683477e-08 7.073459146825709 -0.18643501901520154 S(ph)LSTSGESLYHVLGLDK ddPTM_KYSE-520_SHP099_60min_R1 4 SLSTSGESLYHVLGLDK 17 0 Q9H3Z4-2;Q9H3Z4 Q9H3Z4-2 DNAJC5 DnaJ homolog subfamily C member 5 1 S(0.547)LS(0.424)T(0.012)S(0.01)GES(0.006)LYHVLGLDK;S(0.438)LS(0.438)T(0.06)S(0.06)GES(0.003)LYHVLGLDK;S(0.529)LS(0.395)T(0.035)S(0.035)GES(0.005)LYHVLGLDK;S(0.572)LS(0.403)T(0.009)S(0.013)GES(0.002)LYHVLGLDK 169.49 1.9044e-08 5435470000.0 312545.0 650552.0 677960.0 1651010.0 473581.0 626668.0 686890.0 607544.0 712830.0 611173.0 True False 295207.5058069888 619298.5054215393 721662.3863743538 1807921.4940057455 510849.13039270503 622756.7325613077 756327.5446003801 605436.5716658357 583398.0409819783 605758.4827053995 0.4873353229632907 1.022352180122461 1.1913368231366925 2.9845582779647146 0.8433214638797687 1.028061100820234 1.2485628615921625 0.9994685818709031 0.9630868698304372 1.0 19.208383176955078 S(ph)LT(ph)RS(ph)PPAIR ddPTM_KYSE-520_SHP099_60min_R1 3 SLTRSPPAIR 10 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)LT(1)RS(1)PPAIR;S(1)LT(1)RS(1)PPAIR;S(1)LT(1)RS(1)PPAIR 108.71 0.0045244 5677530000.0 2234990.0 2075030.0 1899840.0 1880940.0 1989760.0 2012930.0 1911910.0 2001040.0 2520770.0 1936770.0 True False 2111010.6493578944 1975342.4441164709 2022306.7262514778 2059703.972074767 2146342.791814256 2000366.5572115309 2105184.52124345 1994098.8592862452 2063061.711440514 1919611.7245842577 1.0997071034326429 1.0290322875290225 1.0534977987225316 1.072979470637923 1.118112983123763 1.042068316000082 1.0966720479368728 1.0388032297094454 1.0747286469545418 1.0 20.872383099195392 -9.240203619932798 0.7461681255437174 0.9966547845495992 1.069853788133152 0.3629913543624953 0.02763713240433965 10.135082541944147 4.922460461910049 0.12978846432772823 0.009530772166797923 5.751702042813808e-10 9.240203619932798 0.0731990035835528 S(ph)LTAHSLLPLAEK ddPTM_KYSE-520_SHP099_60min_R1 2 SLTAHSLLPLAEK 13 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 S(0.754)LT(0.226)AHS(0.02)LLPLAEK;S(0.996)LT(0.004)AHSLLPLAEK 146.2 5.6748e-06 274590000.0 717160.0 829960.0 914790.0 871750.0 884040.0 764900.0 797540.0 879520.0 1005970.0 900950.0 True False 677377.7051769838 790087.475804642 973758.8271157508 954600.8578988062 953608.9185004606 760125.9753747522 878163.1264403148 876469.150401512 823311.2064400216 892968.2839284942 0.7585686046955122 0.8847878362809909 1.0904741463289485 1.0690198913887152 1.067909057536944 0.8512351323729885 0.9834202874226998 0.981523270396126 0.92199378327075 1.0 19.76824940965828 -4.5040715704183905 4.412558940507758 0.9948741047226481 0.7778855967385002 0.5413387865012358 0.06862026925929353 0.1574134330463818 7.3615432878838405 0.018917772222637658 0.07150618306865941 3.1327694108401066e-05 4.5040715704183905 -0.21698850798414793 S(ph)LTEGLVLDTMNDS(ph)LSK ddPTM_KYSE-520_SHP099_60min_R1 3 SLTEGLVLDTMNDSLSK 17 0 A0A0D9SFF0;Q08050-2;Q08050;Q08050-3 A0A0D9SFF0 FOXM1 Forkhead box protein M1 2 S(0.944)LT(0.056)EGLVLDT(0.001)MNDS(0.993)LS(0.006)K;S(0.766)LT(0.234)EGLVLDT(0.002)MNDS(0.967)LS(0.031)K;S(0.745)LT(0.255)EGLVLDTMNDS(0.974)LS(0.026)K 220.28 3.7861e-18 116960000.0 376770.0 362110.0 352308.0 321191.0 321673.0 329777.0 310192.0 366641.0 439790.0 371510.0 True False 355869.8170276262 344713.69206180895 375018.33739273105 351716.89607040427 346986.8350309925 327718.7394184331 341549.2345421852 365369.2079456523 359935.2222037009 368218.710430406 0.9664631561271145 0.9361656056501791 1.0184662722716535 0.9551847478344787 0.9423389556315707 0.8900110997492958 0.9275716438823894 0.9922613859534108 0.9775038910515368 1.0 18.49020341117171 -7.277287162460136 24.3769651571966 0.9886619874022544 0.948106581711563 0.27764671673513064 0.030945405694875052 947.4562764292284 1457361.7862351204 0.018510204271491297 0.008944782864390209 5.2809595081401316e-08 7.277287162460136 -0.04055540569069138 S(ph)LTEGLVLDTMNDSLSK ddPTM_KYSE-520_SHP099_60min_R1 4 SLTEGLVLDTMNDSLSK 17 0 A0A0D9SFF0;Q08050-2;Q08050;Q08050-3 A0A0D9SFF0 FOXM1 Forkhead box protein M1 1 S(0.996)LT(0.004)EGLVLDTMNDSLSK;S(0.999)LT(0.001)EGLVLDTMNDSLSK;S(0.944)LT(0.056)EGLVLDTMNDSLSK;S(0.998)LT(0.002)EGLVLDTMNDSLSK 358.04 8.332399999999999e-72 377620000.0 557720.0 640170.0 547316.0 420707.0 516403.0 530289.0 458904.0 576280.0 678020.0 565428.0 True False 526782.1598127433 609415.2722852405 582596.8650965621 460690.8667898287 557040.9781688533 526979.2696502829 505294.49479144183 574281.019184763 554908.6594932887 560418.7478163271 0.9399795454119819 1.0874284178747202 1.039574188705592 0.8220475645843606 0.993972775427954 0.9403312642620518 0.9016373859017438 1.0247355596550798 0.9901679086495437 1.0 19.096145693819437 S(ph)LTEISTDFDRS(ph)SPPLQPPPVNSLTTENR ddPTM_KYSE-520_SHP099_60min_R1 1 SLTEISTDFDRSSPPLQPPPVNSLTTENR 29 1 J3KRR7;Q9NQC7-2;Q9NQC7 J3KRR7 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD 2 S(0.983)LT(0.017)EIS(0.001)T(0.001)DFDRS(0.528)S(0.47)PPLQPPPVNSLTTENR 94.48 0.0022954 101670000.0 48046.0 46620.0 38626.0 49983.0 37000.0 47525.0 31471.0 41468.0 51431.0 47406.0 True False 45380.792602673544 44380.30522195336 41115.89376378514 54733.36929206309 39911.6894987976 47228.37884649637 34652.395807361565 41324.15718670393 42092.42687000288 46986.01972130992 0.9658360693636633 0.9445427700662463 0.8750665412319985 1.164886270782359 0.8494375504783639 1.0051581114259935 0.7375043898780258 0.8794989963357521 0.8958500234679887 1.0 15.519943938913448 -6.70266099683712 24.999934950477282 0.8681654308388146 0.9658507361335676 0.15926381950429236 0.0993759718258677 128.40411333309314 54612.79397733529 0.03652684621926843 0.028293556111365994 1.9830743772025229e-07 6.70266099683712 0.09768530529475306 S(ph)LTELVQQPCPPIEASK ddPTM_KYSE-520_SHP099_60min_R1 2 SLTELVQQPCPPIEASK 17 0 A0A2R8YDI1;A0A2R8Y852;P39880-6;P39880-4;P39880-5;P39880-2;P39880;P39880-3 A0A2R8YDI1 CUX1 Homeobox protein cut-like 1 1 S(0.972)LT(0.028)ELVQQPCPPIEASK;S(0.857)LT(0.143)ELVQQPCPPIEASK 232.15 3.8877999999999995e-20 804760000.0 1136830.0 1191040.0 908750.0 734380.0 903290.0 1225750.0 952990.0 1052320.0 1338230.0 1178750.0 True False 1073767.7736855806 1133820.6506125114 967329.4790514089 804175.2544006024 974373.7839829427 1218099.6395811248 1049327.529486115 1048669.7475333342 1095241.1660330147 1168307.192053622 0.9190799996686981 0.9704816150446776 0.8279752839243081 0.6883251766917934 0.8340047811142993 1.0426193109707549 0.898160634996719 0.8975976135951093 0.9374599193452077 1.0 20.15598823239681 -6.215988507430525 24.915165945339883 0.9452044960322877 0.8447990008084528 0.30828246260676617 0.07951673913929475 632.2618848110326 346591.9104330413 0.02902141689137061 0.029021274878341476 6.081510943365824e-07 6.215988507430525 -0.1004054952238349 S(ph)LTESLESILSR ddPTM_KYSE-520_SHP099_60min_R1 1 SLTESLESILSR 12 0 Q86TI0-2;Q86TI0;C9JIE2;H0Y8P0 Q86TI0-2 TBC1D1 TBC1 domain family member 1 1 S(0.998)LT(0.002)ESLESILSR 166.45 2.8070999999999998e-06 53920000.0 58534.0 69431.0 63936.0 45241.0 59670.0 55548.0 60312.0 58888.0 78683.0 62991.0 True False 55287.002335363846 66095.43054194425 68057.41686121702 49540.69103779735 64365.689524141955 55201.304327515645 66408.92554839661 58683.731272562494 64396.150637017316 62432.948746256465 0.8855420646566674 1.0586626431913868 1.0900881382011898 0.7935023418346526 1.0309570638052137 0.8841694239345945 1.0636839502535678 0.9399480955331494 1.0314449650414528 1.0 15.930019986319932 -6.780083394377189 24.99991506079308 1.003764875622878 0.9637261071739224 0.07066624840836133 0.08908518793944496 957.2003136779712 1283505.8202616333 0.03682688356064396 0.024879030711140233 1.659268259756861e-07 6.780083394377189 -0.04003876844895571 S(ph)LTETELTKPNYLYLLPTEK ddPTM_KYSE-520_SHP099_60min_R1 2 SLTETELTKPNYLYLLPTEK 20 1 Q99650 Q99650 OSMR Oncostatin-M-specific receptor subunit beta 1 S(0.999)LT(0.001)ETELTKPNYLYLLPTEK;S(0.897)LT(0.04)ET(0.045)ELT(0.019)KPNYLYLLPTEK 181.33 5.038000000000001e-10 489660000.0 292946.0 342078.0 260035.0 350270.0 348550.0 330939.0 326970.0 417410.0 491790.0 320861.0 True False 276695.7014066272 325644.0594104536 276797.2721707104 383559.5554874849 375978.90202178125 328873.4869454112 360023.318519685 415962.1021342267 402493.33301702724 318018.4211660808 0.8700618674605853 1.0239786054418225 0.8703812538776071 1.206092257426736 1.1822551053589168 1.034133449689889 1.132083220838543 1.3079811559626482 1.2656289894818091 1.0 18.278750810245903 -5.264919862667181 24.996769085591474 1.1683739825880333 0.9317243736651909 0.559835065655795 0.09712234074230104 228.0597138898887 1637923.3355221995 0.027936329462920725 0.043366636604616836 5.433505829375958e-06 5.264919862667181 -0.23664960892284237 S(ph)LTFTGGAK ddPTM_KYSE-520_SHP099_60min_R1 4 SLTFTGGAK 9 0 Q8NHQ8;F5H8C5;F5H0S5;F5H7J1;Q8NHQ8-2 Q8NHQ8 RASSF8 Ras association domain-containing protein 8 1 S(0.998)LT(0.002)FTGGAK;S(0.999)LT(0.001)FTGGAK;S(0.998)LT(0.002)FTGGAK;S(0.999)LT(0.001)FTGGAK 148.56 0.00033356 1551200000.0 1791410.0 1636870.0 2103430.0 2117990.0 2056730.0 1528340.0 2092720.0 2082760.0 2919900.0 2234700.0 True False 1692036.9162126991 1558232.3082080379 2239020.463406994 2319283.132803084 2218582.9498070832 1518801.063151061 2304272.560579001 2075535.3916798402 2389719.764689025 2214902.2965702945 0.7639329819797308 0.7035219163485951 1.0108890432205726 1.047126609780675 1.0016617677639723 0.6857192145689117 1.0403495288018318 0.9370776286131178 1.078927846338608 1.0 21.078811629566143 -4.759630012147395 24.997310296213065 0.968471069497324 0.7337273779642672 0.4575119695832688 0.10497991786632974 41.880987933673104 578562.0166615596 0.027758551992907127 0.06611899856888183 1.739281941638607e-05 4.759630012147395 -0.23474369153305674 S(ph)LTIAEFK ddPTM_KYSE-520_SHP099_60min_R1 5 SLTIAEFK 8 0 K7EL99;K7EK42;A0A494C0X0;Q99426 K7EL99 TBCB Tubulin-folding cofactor B 1 S(1)LTIAEFK;S(0.997)LT(0.003)IAEFK;S(0.984)LT(0.016)IAEFK;S(0.997)LT(0.003)IAEFK;S(0.997)LT(0.003)IAEFK 157.24 0.00026927 793471000.0 1730237.0 1588153.0 1486857.0 1356986.0 1450240.0 1542188.0 1394669.0 1437939.0 1683904.0 1495213.0 True False 1634257.3044680525 1511855.746013749 1582702.1812753135 1485953.541447284 1564365.6372631425 1532562.6326464089 1535655.753177757 1432951.1252264858 1378149.4813654267 1481966.57607811 1.1027625931975917 1.0201685857279845 1.067974276089135 1.0026903207086661 1.0556011603197517 1.0341411590416545 1.0362283319788024 0.9669254005840408 0.9299463993395682 1.0 20.499081479133825 -7.253736601503229 3.9539336013756388 0.9595260558710174 1.0445346564992386 0.5982250085330674 0.030053889731423835 0.1398998713190055 5.1321502029236985 0.01556419567137748 0.007739687912232779 5.5752378316713795e-08 7.253736601503229 0.08500860062822124 S(ph)LTLDAAPDHNPPCR ddPTM_KYSE-520_SHP099_60min_R1 1 SLTLDAAPDHNPPCR 15 0 B7Z5R6;Q14596-2;Q14596 B7Z5R6 NBR1 Next to BRCA1 gene 1 protein 1 S(0.999)LT(0.001)LDAAPDHNPPCR 184.22 4.144e-11 294360000.0 160320.0 168330.0 145000.0 152830.0 170650.0 135870.0 151290.0 167740.0 181230.0 146820.0 True False 151426.73001000326 160243.17413151896 154346.9320082031 167354.91724998516 184079.18413431945 135021.9849315826 166583.86964811187 167158.14909081045 148323.2004365193 145519.28902423155 1.0405955871924857 1.1011816729315906 1.06066304366359 1.150053153586516 1.2649813324999615 0.9278631433465776 1.1447545597915387 1.1487009743634442 1.0192683144007175 1.0 17.150850873860172 -7.876089119855442 6.167401807874624 1.0016368687402073 1.1053379554137652 0.1754992544095857 0.08287924392616637 0.3607760012759377 16.95487435623168 0.07900667600602994 0.020527355394929392 1.3301814286919174e-08 7.876089119855442 0.10370108667355793 S(ph)LTLTPTR ddPTM_KYSE-520_SHP099_60min_R1 3 SLTLTPTR 8 0 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y802;A0A2R8Y4W8;A0A2R8YG73 Q3V6T2 CCDC88A Girdin 1 S(0.999)LT(0.001)LTPTR;S(0.995)LT(0.005)LTPTR;S(0.986)LT(0.014)LTPTR 161.27 0.00021554 1224820000.0 904710.0 902450.0 858230.0 828500.0 922600.0 920750.0 842860.0 922450.0 1121810.0 1083830.0 True False 854523.9328053269 859094.9473949343 913552.8790165519 907240.3909023921 995203.3711240722 915003.2577151294 928064.5143208911 919250.2362514482 918117.5825287844 1074228.1094069814 0.7954771666485805 0.7997323286105317 0.8504272705364888 0.8445509691635481 0.9264357936727851 0.8517774294886487 0.8639361660655308 0.855730945970975 0.8546765575103258 1.0 20.034868947532818 -13.999999999999998 0.1310325584788529 1.4746434016608383 0.7921062050698282 0.695132757406816 0.03127632195235997 91.83453723008172 0.7558597906845378 11.570890325667603 0.2561998088087691 1.0000000000000041e-14 13.999999999999998 -0.6825371965910101 S(ph)LTNDWEDHLAVK ddPTM_KYSE-520_SHP099_60min_R1 7 SLTNDWEDHLAVK 13 0 P08238;P07900;P07900-2 P08238;P07900 HSP90AB1;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha 1 S(0.963)LT(0.037)NDWEDHLAVK;S(0.977)LT(0.023)NDWEDHLAVK;S(0.61)LT(0.39)NDWEDHLAVK;S(0.979)LT(0.021)NDWEDHLAVK;S(0.996)LT(0.004)NDWEDHLAVK;S(0.997)LT(0.003)NDWEDHLAVK;S(0.974)LT(0.026)NDWEDHLAVK 254.59 6.6296e-17 4790610000.0 6869760.0 6022880.0 4992860.0 5101520.0 4949670.0 5317750.0 4829170.0 4961540.0 5294270.0 5512230.0 True False 6488680.718272955 5733531.804272816 5314707.744458457 5586366.926972081 5339180.869230096 5284559.949730794 5317349.631757373 4944329.575772143 4332964.025685868 5463395.9306500405 1.1876643759005263 1.0494446818520498 0.9727846584653637 1.0225081612028453 0.9772641296738007 0.9672665164323963 0.9732682198496109 0.9049919937220917 0.793089880485804 1.0 22.381366547821777 -1.0000000000000808 0.40182062492136367 0.9170595697186739 5.1491160355145285 0.6486352746115935 0.05646783625760725 46.853692306247396 0.6209070676947411 0.04152593889900857 157.16783182948024 0.0999999999999814 1.0000000000000808 4.232056465795854 S(ph)LTNLVAAGDDVLEDQEILMHHPPQVDELDR ddPTM_KYSE-520_SHP099_60min_R1 2 SLTNLVAAGDDVLEDQEILMHHPPQVDELDR 31 0 Q7Z5Y7-2;Q7Z5Y7-3;Q7Z5Y7 Q7Z5Y7-2 KCTD20 BTB/POZ domain-containing protein KCTD20 1 S(0.5)LT(0.5)NLVAAGDDVLEDQEILMHHPPQVDELDR;S(0.5)LT(0.5)NLVAAGDDVLEDQEILMHHPPQVDELDR 64.532 0.048875999999999996 43827000.0 5759.9 3610.2 4913.5 6412.1 3290.3 5477.9 3884.4 6084.6 8005.6 3627.6 True False 5440.386864924014 3436.7605729793236 5230.232071877965 7021.504056131841 3549.2278907538857 5443.710394176164 4277.073060090725 6063.493942756314 6551.984844753069 3595.4622862300957 1.5131258324582104 0.955860554049317 1.454675826223713 1.9528793510149731 0.9871409037849518 1.5140502001716136 1.1895752811734566 1.6864295770750504 1.8222927465672123 1.0 11.811961561633765 -7.271951359772825 24.822445687757167 1.5657708532084615 1.3679434843556697 0.023203781747103913 0.3375195438868387 2063.6929779185903 4873068.431058004 0.17749572868576877 0.08667510400926914 5.346242330289666e-08 7.271951359772825 -0.19782736885279184 S(ph)LTNSHLEK ddPTM_KYSE-520_SHP099_60min_R1 6 SLTNSHLEK 9 0 F8VX12;F8VX04;Q9H2H9 F8VX12 SLC38A1 Sodium-coupled neutral amino acid transporter 1 1 S(0.999)LT(0.001)NSHLEK;S(0.999)LT(0.001)NSHLEK;S(0.895)LT(0.013)NS(0.092)HLEK;S(0.861)LT(0.137)NS(0.002)HLEK;S(0.954)LT(0.039)NS(0.008)HLEK;S(0.993)LT(0.006)NSHLEK 163.45 0.00012502 3976280000.0 5248860.0 5440460.0 4467550.0 6116600.0 5825710.0 5826860.0 5632990.0 6469520.0 8223700.0 5075900.0 True False 4957695.272457002 5179092.135303048 4755535.421332739 6697919.824977156 6284160.233244334 5790492.405376026 6202427.601884574 6447078.745117318 6730483.38260665 5030931.474990448 0.9854428145369272 1.0294499460088316 0.9452594305792583 1.3313478544228974 1.2491047163897746 1.1509781904526974 1.2328586928122192 1.2814880856888553 1.3378205241047194 1.0 22.262394108507372 -5.254311450173712 24.991188255142617 1.23605099581887 0.9909906387484414 0.5757163663481646 0.09393740552378317 375.2574416257741 1315684.8672896007 0.02466468392138268 0.041614065675814084 5.567863116936273e-06 5.254311450173712 -0.2450603570704285 S(ph)LTPAVPVESKPDKPSGK ddPTM_KYSE-520_SHP099_60min_R1 4 SLTPAVPVESKPDKPSGK 18 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E7ES10;E9PCH5;P20810-3;P20810-2;E9PSG1;F8W7E0;H0YA91;H0Y944;E7EQK6;E7EVY3 P20810-6;E7EVY3 CAST Calpastatin 1 S(1)LTPAVPVESKPDKPSGK;S(0.999)LT(0.001)PAVPVESKPDKPSGK;S(0.988)LT(0.012)PAVPVESKPDKPSGK;S(0.999)LT(0.001)PAVPVESKPDKPSGK 227.8 5.1551e-19 5012370000.0 5183450.0 4297940.0 4655430.0 4013060.0 4030010.0 4220350.0 4017490.0 4241730.0 5127690.0 4238730.0 True False 4895913.695548608 4091460.511060534 4955526.466751371 4394460.015829513 4347148.859379709 4194009.230190656 4423617.096123956 4227016.4286572235 4196630.754545796 4201178.149882039 1.1653668377966966 0.973884078487701 1.179556374416189 1.0460065864983377 1.0347451843958981 0.998293593026617 1.0529468016604253 1.0061502459199236 0.9989175904534372 1.0 22.002362533558966 -5.509413607402044 19.703916199579915 1.0186953812657322 1.0963224655534678 0.35537494762131794 0.0542505439683953 45.9872140881728 67293.28762750301 0.014622042348974386 0.020584175503762125 3.0944708258862376e-06 5.509413607402044 0.07762708428773557 S(ph)LTS(ph)SLENIFSR ddPTM_KYSE-520_SHP099_60min_R1 4 SLTSSLENIFSR 12 0 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 2 S(0.591)LT(0.524)S(0.55)S(0.335)LENIFSR;S(1)LT(0.213)S(0.606)S(0.182)LENIFSR;S(1)LTS(0.583)S(0.417)LENIFSR;S(1)LTS(0.856)S(0.144)LENIFSR 194.23 6.8292e-08 406684000.0 636357.0 532542.0 574242.0 565480.0 587095.0 611870.0 546221.0 539895.0 724651.0 586430.0 True False 601057.0086637703 506957.8829581613 611258.5581396851 619223.0491822391 633296.0363863948 608051.0923683471 601438.3492832391 538022.2302574408 593072.6453651387 581234.6864356354 1.0341038184587594 0.8722085842244389 1.0516553337313161 1.0653580449225486 1.0895702737047928 1.046136967663029 1.0347599056269348 0.9256540306580966 1.0203669175391068 1.0 19.14876127592007 -4.797220399741276 24.999986934833355 1.0307851504266765 0.9531557689121443 0.23199217395504856 0.05527377087664372 220.87983371746455 154326.79979650525 0.014983922148687368 0.031193273351819362 1.595069461341601e-05 4.797220399741276 -0.07762938151453225 S(ph)LTSS(ph)LENIFSR ddPTM_KYSE-520_SHP099_60min_R1 3 SLTSSLENIFSR 12 0 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 2 S(1)LTS(0.085)S(0.915)LENIFSR;S(0.999)LT(0.001)S(0.4)S(0.6)LENIFSR;S(1)LTS(0.004)S(0.996)LENIFSR 237.89 3.0706999999999996e-15 448370000.0 984370.0 796420.0 890010.0 790960.0 884370.0 938070.0 795150.0 838910.0 997580.0 836100.0 True False 929765.0338070547 758158.787749208 947381.4686663497 866132.6005892042 953964.8876230178 932215.1571706021 875531.5219161633 836000.0170130659 816444.6189453331 828692.8044759562 1.121965858500502 0.9148852067427422 1.1432239589258277 1.0451793425875393 1.1511683008111557 1.1249224708305638 1.0565212068781344 1.0088177579166149 0.9852198722319441 1.0 19.660477869771952 -7.224947812856249 3.1772563904278583 0.9948568962694757 1.0804149644669272 0.2592921583381871 0.06449835517340628 0.3797234581003492 7.755399408430376 0.03726934710809919 0.0181927161653787 5.957337257733301e-08 7.224947812856249 0.08555806819745149 S(ph)LTSSLENIFSR ddPTM_KYSE-520_SHP099_60min_R1 4 SLTSSLENIFSR 12 0 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 1 S(0.997)LT(0.002)SSLENIFSR;S(1)LTSSLENIFSR;S(0.998)LT(0.002)SSLENIFSR;S(0.985)LT(0.014)SSLENIFSR 183.81 1.15e-07 959140000.0 424761.0 465150.0 493510.0 587720.0 465160.0 509450.0 478310.0 490030.0 626950.0 480990.0 True False 401198.6605899392 442803.4957956161 525322.4442439188 643576.7320955391 501765.4456016409 506270.33357911813 526662.2426557494 488330.20030386193 513111.6841233549 476728.8028045572 0.8415658089666909 0.9288373037052488 1.101931414996302 1.3499849984087997 1.0525175794913064 1.0619671616247446 1.1047418145441137 1.0243354238952096 1.076317774602164 1.0 18.86280926663271 -4.656880641409256 3.6704826907487296 1.1041290554476542 0.8601688039251891 0.47011418059544396 0.09139323583281328 0.1950917301727015 4.870978866459412 0.02509636597569019 0.07730007234923925 2.2035319838337094e-05 4.656880641409256 -0.24396025152246503 S(ph)LVGGLLQSK ddPTM_KYSE-520_SHP099_60min_R1 3 SLVGGLLQSK 10 0 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 S(1)LVGGLLQSK;S(1)LVGGLLQSK;S(1)LVGGLLQSK 136.01 0.00028062 1679740000.0 2486200.0 2289840.0 2225150.0 2133100.0 2056340.0 2275180.0 2154610.0 2273050.0 2622830.0 2158280.0 True False 2348285.5298831756 2179832.64928009 2368586.729365879 2335829.182660097 2218162.2590258755 2260979.7576848296 2372419.0057671913 2265165.3200838566 2146590.188163747 2139159.3183164313 1.0977609333611167 1.0190136987999892 1.1072512033512365 1.0919379228371122 1.0369317703609011 1.0569478104437187 1.1090426904875608 1.0589044493734086 1.0034737337157122 1.0 21.02861250352682 -7.724370546006676 4.14654115693536 0.9995785172268895 1.0725616689858366 0.5051323201215642 0.028197088913206082 0.16858300099421084 5.973119366840402 0.023274139472593148 0.007209782818224713 1.886381175999104e-08 7.724370546006676 0.0729831517589471 S(ph)LVGTPYWMAPELISR ddPTM_KYSE-520_SHP099_60min_R1 17 SLVGTPYWMAPELISR 16 0 O96013;O96013-4;O96013-2;O96013-3;M0R1R1 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(0.973)LVGT(0.027)PYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR;S(1)LVGTPYWMAPELISR 294.97 1.5267e-37 23382562000.0 8813226.0 9005354.0 7954549.0 8315665.0 8293990.0 7541202.0 7457591.0 7913437.0 10092372.0 7756694.0 True False 8324338.785049533 8572723.276528075 8467311.956268393 9105983.30140416 8946679.826652233 7494134.561051148 8211477.077354313 7885987.134057087 8259851.652794314 7687975.725776625 1.0827738122454365 1.1150819906708376 1.1013707975011902 1.1844448559941687 1.1637237350601097 0.9747864494322535 1.0680935229572157 1.0257559877064335 1.0743857612739691 1.0 22.87417235023852 -6.25257642845509 24.99988494682374 1.0326821664022883 1.1301712911545347 0.6308471899464877 0.03851782951029482 458.97445507825745 1294637.671741377 0.013138095647556806 0.012945716969541565 5.590151417400602e-07 6.25257642845509 0.09748912475224647 S(ph)LVMHT(ph)PPVLK ddPTM_KYSE-520_SHP099_60min_R1 4 SLVMHTPPVLK 11 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 S(1)LVMHT(1)PPVLK;S(1)LVMHT(1)PPVLK;S(1)LVMHT(1)PPVLK;S(1)LVMHT(1)PPVLK 123.02 0.00025935 1007540000.0 982990.0 1074370.0 1048640.0 1171740.0 1047440.0 863880.0 1053890.0 1238920.0 1286620.0 1121900.0 True False 928461.5851580175 1022755.6525377514 1116237.0122833236 1283101.8173035218 1129867.5688816367 858488.2044799848 1160427.4861752174 1234622.4756861026 1053002.2410507873 1111960.838824992 0.8349768739509944 0.9197766835192652 1.0038456151592983 1.1539091778262391 1.0161037416349723 0.7720489557772092 1.0435866495095636 1.1103111122067275 0.9469778109843272 1.0 20.084674549267035 -4.535225317983999 2.811668710211798 1.0082974959147935 0.8394934766832607 0.24309663352505884 0.09630460241221253 0.4375501343354215 6.410747383609693 0.02706210572133236 0.1263055165968497 2.915913805085764e-05 4.535225317983999 -0.16880401923153276 S(ph)LY(ph)LSAK ddPTM_KYSE-520_SHP099_60min_R1 1 SLYLSAK 7 0 H0Y767;Q86WG5-3;Q86WG5 H0Y767 SBF2 Myotubularin-related protein 13 2 S(0.981)LY(0.995)LS(0.024)AK 75.738 0.053690999999999996 1052200000.0 1395400.0 1113200.0 1069000.0 1018900.0 1034600.0 1181200.0 1030900.0 1172000.0 1284100.0 1178600.0 True False 1317994.3803390623 1059720.2010527344 1137909.4504604759 1115735.9496565457 1116017.1339312422 1173827.6926561082 1135113.4326144385 1167934.6055468554 1050939.809526759 1168158.5209369252 1.128266717844048 0.9071715713743906 0.9741053376452813 0.9551237521784853 0.9553644594709091 1.004853084249761 0.971711811599009 0.999808317633218 0.8996551330069907 1.0 20.155804632798596 -4.248593688630079 24.7219626621076 0.9645108496624905 1.1282668397669366 0.6726250224856944 0.034558108978035094 1039.1145193559605 1999770.8240424835 0.008187312836681405 0.14542790064017172 5.641652230855006e-05 4.248593688630079 0.1637559901044462 S(ph)LYESFVSSSDR ddPTM_KYSE-520_SHP099_60min_R1 3 SLYESFVSSSDR 12 0 P18615;P18615-3;A2ABK4;A0A0A0MT02 P18615 NELFE Negative elongation factor E 1 S(1)LYESFVSSSDR;S(1)LYESFVSSSDR;S(1)LYESFVSSSDR 275.17 4.752400000000001e-22 1174760000.0 216760.0 208816.0 201610.0 218832.0 209854.0 181324.0 198786.0 247051.0 303488.0 236551.0 True False 204735.89069965275 198784.16592079375 214606.1031874054 239629.72748576 226368.3158940723 180192.28965727755 218881.22884440215 246194.03774313672 248382.22950989552 234455.34217389332 0.8732404593613485 0.8478551355565078 0.9153389349014451 1.022069811947509 0.9655071784467041 0.7685569797067393 0.9335732204475 1.050067938142936 1.0594010236954752 1.0 17.838953626346804 -7.188400472782496 4.738860780074707 1.0411485502467739 0.9022271302879995 0.468297423838267 0.06530960881914334 0.20620708377506147 8.711573490616285 0.03513517267859064 0.019444481820989946 6.480365887250661e-08 7.188400472782496 -0.13892141995877438 S(ph)MDDIDYKPTNK ddPTM_KYSE-520_SHP099_60min_R1 1 SMDDIDYKPTNK 12 1 Q6P3S1 Q6P3S1 DENND1B DENN domain-containing protein 1B 1 S(1)MDDIDYKPTNK 59.708999999999996 0.053891999999999995 0.0 191070.0 183710.0 147980.0 149310.0 144750.0 137250.0 107030.0 148560.0 209050.0 135790.0 True False 180470.96621139825 174884.2958456683 157519.02757637147 163500.37750831156 156141.00148516084 136393.37183969753 117849.63691213849 148044.6800341647 171091.7897216482 134587.00624302134 1.3409241445308997 1.2994144139730908 1.1703880781176021 1.2148303322319383 1.1601491543932543 1.0134215452672635 0.8756390397698536 1.0999923704881516 1.2712355709340233 1.0 17.038179605531788 -5.275820308317074 0.9075754907482427 1.0541830258702818 1.3390314275795319 0.4890521970910282 0.10028531977468265 0.6904689129756987 1.0420723553660882 0.045980581064527695 0.14384375266307278 5.298826403404168e-06 5.275820308317074 0.2848484017092501 S(ph)MDDLLSACDTSSPLTR ddPTM_KYSE-520_SHP099_60min_R1 1 SMDDLLSACDTSSPLTR 17 0 J3QR65;Q9NYA4 J3QR65 MTMR4 Myotubularin-related protein 4 1 S(1)MDDLLSACDTSSPLTR 154.81 2.4989e-06 386370000.0 182610.0 178790.0 135550.0 117960.0 149210.0 176260.0 148510.0 158200.0 195770.0 143880.0 True False 172480.25927598993 170200.6600307386 144287.76988766837 129170.88293403272 160951.9781112321 175159.89595967263 163522.84011792633 157651.24112415762 160223.10296009132 142605.33513694606 1.2094937339500975 1.1935083625538436 1.0117978387632318 0.9057927798422687 1.1286532720298823 1.2282843120242588 1.146681082870377 1.1055073148053174 1.1235421368087433 1.0 17.121668431195005 -10.617339225494645 2.2601331743036126 0.98444742639922 1.1141178776365972 0.12762119185645115 0.09150776813634495 5701111.259950938 4240870.786225237 520259.7895602604 0.026627696724455568 2.4135748653515107e-11 10.617339225494645 0.1296704512373772 S(ph)MDELNHDFQALALEGR ddPTM_KYSE-520_SHP099_60min_R1 15 SMDELNHDFQALALEGR 17 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4 Q5T1Z4 PUM1 Pumilio homolog 1 1 S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR;S(1)MDELNHDFQALALEGR 322.08 8.8841e-48 3797857000.0 1604185.0 1439071.5 1397618.0 1225130.0 1409552.0 1312987.0 1325605.0 1378108.0 1644313.0 1316019.0 True False 1515197.6601864845 1369936.3450496404 1487710.6925478668 1341565.9868512338 1520475.7231461934 1304792.1611052032 1459610.090058071 1373327.6650008247 1345747.2089575347 1304360.0955072877 1.1616406124393115 1.050274651737831 1.140567468808735 1.0285242483820973 1.1656870893116786 1.0003312471758403 1.1190238762175595 1.0528746392434785 1.0317298218435231 1.0 20.31491077960295 -6.511725182194889 0.013720046964356471 5.4320361925582665e-08 2.148466941761033 0.3129007514903386 0.051300028817525954 1281.8205736556934 8.471496544009849 643.4051651877012 681.7260689639204 3.0780439582960953e-07 6.511725182194889 2.148466887440671 S(ph)MDIDDFIR ddPTM_KYSE-520_SHP099_60min_R1 2 SMDIDDFIR 9 0 A0A494C0G7;Q9UNQ2 A0A494C0G7 DIMT1 Probable dimethyladenosine transferase 1 S(1)MDIDDFIR;S(1)MDIDDFIR 135.66 0.00048353 38085000.0 79599.0 87801.0 69101.0 75879.0 82371.0 79444.0 72251.0 76807.0 89169.0 79888.0 True False 75183.48479332746 83582.9081680121 73555.36102550909 83090.51734614681 88853.12907312044 78948.16052774448 79554.83618180804 76540.57444388863 72978.15736756603 79180.25447192343 0.9495231518861411 1.0556029243079765 0.9289609071866665 1.0493843181018057 1.1221627117228692 0.9970687901203796 1.0047307464769193 0.9666623952443749 0.9216711647907547 1.0 16.272853083502355 -7.165717499321832 2.441548846549743 0.956367837947049 1.0204939462867295 0.1656843739085766 0.05428805164854851 0.522869138042916 6.000265757684465 0.033799631522605796 0.01611375877075176 6.827826874671181e-08 7.165717499321832 0.06412610833968047 S(ph)MDLGIADETK ddPTM_KYSE-520_SHP099_60min_R1 8 SMDLGIADETK 11 0 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-8 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 S(1)MDLGIADETK;S(1)MDLGIADETK;S(1)MDLGIADETK;S(1)MDLGIADETK;S(1)MDLGIADETK;S(1)MDLGIADETK;S(1)MDLGIADETK;S(1)MDLGIADETK 253.42 6.4558000000000005e-15 4188800000.0 7917090.0 6757510.0 6122720.0 5909680.0 6484730.0 6476150.0 5837620.0 6261090.0 7624590.0 6454330.0 True False 7477913.235372374 6432869.076370703 6517400.327898378 6471334.2103899205 6995041.357933452 6435729.945644129 6427743.59928093 6239371.7401394 6240156.656272586 6397149.657592758 1.1689445511872403 1.0055836459501226 1.0187975390200377 1.0115965010618617 1.09346220306587 1.006030855946223 1.0047824333219812 0.9753362159870542 0.9754589137782893 1.0 22.60899780399319 -6.461483049462002 5.993961316060512 0.9891413103262 1.0518657463180245 0.3485334580572763 0.045876669667659055 0.2893750842592863 21.233558539497103 0.016505505818969094 0.014329455803201484 3.4555481633852394e-07 6.461483049462002 0.06272443599182453 S(ph)MDSSDLSDGAVTLQEYLELKK ddPTM_KYSE-520_SHP099_60min_R1 1 SMDSSDLSDGAVTLQEYLELKK 22 1 J3QRU8;A0A0C4DGN6;Q9Y2X7;Q9Y2X7-3;J3QLH1 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 S(0.944)MDS(0.026)S(0.026)DLS(0.005)DGAVTLQEYLELKK 64.723 0.017941 68718000.0 114630.0 119370.0 115950.0 101580.0 93558.0 106980.0 92688.0 100700.0 142290.0 107760.0 True False 108271.24539076029 113635.28602197718 123424.32252655945 111234.13265885932 100920.48232779744 106312.29813778393 102057.80758770694 100350.69520355668 116453.7228390018 106805.33023601127 1.0137251123282869 1.0639477053333717 1.1556007762330274 1.041466117964914 0.9449011777295206 0.9953838249726126 0.9555497591944748 0.939566358549788 1.0903362461561623 1.0 16.704624122521928 -5.546830628930759 7.960837888405013 0.9840698071799365 1.080061398541114 0.3871975922089145 0.05135392555928071 0.18205520716334855 48.478053270102244 0.015087883696879748 0.0197408661781073 2.8390260080127065e-06 5.546830628930759 0.09599159136117752 S(ph)MEDLVNEFDEK ddPTM_KYSE-520_SHP099_60min_R1 4 SMEDLVNEFDEK 12 0 Q99689;E9PNH2;Q99689-2 Q99689 FEZ1 Fasciculation and elongation protein zeta-1 1 S(1)MEDLVNEFDEK;S(1)MEDLVNEFDEK;S(1)MEDLVNEFDEK;S(1)MEDLVNEFDEK 236.17 3.1848000000000004e-15 323452000.0 646690.0 610195.0 499967.0 529698.0 571092.0 559555.0 543699.0 531322.0 591348.0 604559.0 True False 610816.8165554458 580880.3162786318 532195.672795484 580040.3386604885 616033.691331009 556062.6096886112 598661.4009108911 529478.9679934875 483974.10986997007 599203.0775997848 1.0193819748092448 0.9694214499121931 0.8881724622097886 0.9680196253062382 1.0280883299175336 0.928003594233894 0.9990960048285075 0.8836385989778461 0.8076963019092208 1.0 19.192685508157616 -7.2751081182178785 23.593416326957076 0.88425055718404 0.9685482983319905 0.24300270363844412 0.05867392450300645 484.60161362297464 836455.7334203396 0.03093493621856956 0.015006104003547982 5.3075229625696846e-08 7.2751081182178785 0.08429774114795052 S(ph)MGFLSIK ddPTM_KYSE-520_SHP099_60min_R1 2 SMGFLSIK 8 0 Q12923-3;Q12923;Q12923-4;Q12923-2 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 S(1)MGFLSIK;S(1)MGFLSIK 157.75 0.00025881 1116820000.0 334890.0 567090.0 560030.0 640780.0 667080.0 415730.0 644860.0 574750.0 647870.0 600680.0 True False 316312.984113336 539846.1451805563 596130.4298796813 701679.5385424685 719575.4008339982 413135.2748627862 710048.7420271093 572756.3263976583 530233.1394736398 595358.4425219682 0.5312983935751686 0.9067581924155489 1.0012966765944278 1.1785833347220522 1.2086423059457103 0.6939269612314969 1.1926407543988244 0.9620361205787792 0.8906116073999819 1.0 19.18339899587854 -4.25937384815957 2.31263259159936 1.0217048015770474 0.409201547588208 0.49249596713120936 0.14757810799813378 0.5040401002180441 3.181137289806726 0.0388509567059467 0.6268971112270628 5.5033375568427574e-05 4.25937384815957 -0.6125032539888393 S(ph)MGNLLEK ddPTM_KYSE-520_SHP099_60min_R1 11 SMGNLLEK 8 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 S(1)MGNLLEK;S(1)MGNLLEK;S(1)MGNLLEK;S(1)MGNLLEK;S(1)MGNLLEK;S(1)MGNLLEK;S(1)MGNLLEK;S(1)MGNLLEK;S(1)MGNLLEK;S(1)MGNLLEK;S(1)MGNLLEK 147.63 0.00046984 26213279000.0 9485492.0 10009874.0 9133264.0 10790400.0 11118890.0 8730978.0 10913585.0 10442350.0 11884360.0 10106324.0 True False 8959312.849900486 9528984.62791282 9722008.811179075 11815916.371747937 11993883.385169888 8676484.727710145 12016836.678125376 10406127.925112814 9726459.804335667 10016789.831961103 0.8944295528007916 0.9513012439881869 0.9705713082008116 1.1796110899767773 1.1973779610410082 0.8661941473530397 1.1996694429768924 1.0388685496734122 0.9710156614548241 1.0 23.25591689374801 -5.040932761067739 9.909488841786217 1.0696942078759875 0.9322425652801035 0.2488066257560846 0.10199479588394124 0.7645820878434625 182.89873409335092 0.027624187965641114 0.048402759902740046 9.100541593712409e-06 5.040932761067739 -0.13745164259588394 S(ph)MGSPRPK ddPTM_KYSE-520_SHP099_60min_R1 1 SMGSPRPK 8 1 P35612;P35612-4;P35612-3;P35612-2;P35612-8;P35612-9 P35612 ADD2 Beta-adducin 1 S(0.589)MGS(0.411)PRPK 44.309 0.061062 959490000.0 1617900.0 1485200.0 1470600.0 1326800.0 1269800.0 1304000.0 1277400.0 1368300.0 1649300.0 1429700.0 True False 1528151.8617963109 1413848.7626693489 1565397.2290431943 1452898.6730830339 1369726.0358263033 1295861.2523057596 1406532.0582226063 1363553.6866636218 1349828.6954695757 1417033.9702897684 1.0784158275922067 0.9977522009442242 1.1046998603167482 1.0253096986700547 0.966614819788836 0.9144884875559968 0.9925888071229411 0.9622589967866398 0.9525732789550204 1.0 20.43444291345247 -5.666888551690975 3.7441983621056547 0.9614392767135147 1.0553953496478123 0.6275301475532156 0.033377118553211974 0.14394990539239289 3.8648374143249735 0.009839184661983979 0.012807870511944467 2.1533342507732912e-06 5.666888551690975 0.09395607293429764 S(ph)MGYDDLDYGMMSDYGTAR ddPTM_KYSE-520_SHP099_60min_R1 18 SMGYDDLDYGMMSDYGTAR 19 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12 O60716-5 CTNND1 Catenin delta-1 1 S(1)MGYDDLDYGMMSDYGTAR;S(0.997)MGY(0.003)DDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(0.923)MGY(0.001)DDLDY(0.075)GMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(1)MGYDDLDYGMMSDYGTAR;S(0.959)MGY(0.041)DDLDYGMMSDYGTAR;S(0.989)MGY(0.011)DDLDYGMMSDYGTAR;S(0.998)MGY(0.002)DDLDYGMMSDYGTAR;S(0.997)MGY(0.003)DDLDYGMMSDYGTAR 354.96 4.530399999999999e-67 34920180000.0 5510540.0 5294380.0 4451620.0 4832930.0 4812750.0 4901430.0 4468660.0 5154630.0 6439970.0 4995460.0 True False 5204859.361210848 5040030.037773598 4738578.548043833 5292250.214126611 5191486.044198332 4870838.357276855 4920395.762718833 5136749.791629691 5270633.786432551 4951204.110809075 1.0512310227421273 1.0179402676554186 0.9570557872374814 1.0688814469540837 1.048529999574183 0.9837684426386762 0.9937776049218041 1.0374748599871995 1.0645155538884215 1.0 22.23934799420136 -7.469812023960148 24.545937836243024 1.0385036456891807 1.016820779703395 0.040930336268297896 0.03500793494645518 758.234327711539 350721.32703556493 0.019606481039592078 0.00941843652340273 3.389908500801372e-08 7.469812023960148 -0.021682865985785726 S(ph)MNEIK ddPTM_KYSE-520_SHP099_60min_R1 1 SMNEIK 6 0 A0A087WWP8;Q5VWQ0;A0A0C4DGT8 A0A087WWP8 RSBN1 Round spermatid basic protein 1 1 S(1)MNEIK 66.962 0.046366000000000004 296690000.0 508480.0 419600.0 385650.0 365070.0 400820.0 443870.0 514070.0 630220.0 681470.0 508160.0 True False 480273.6007702502 399441.78616755985 410509.61606181704 399766.1430377025 432362.2536461635 441099.6426847835 566037.2124397181 628033.9139144535 557732.2264607112 503658.0977424972 0.9535706919494369 0.7930812349844923 0.8150561222023601 0.7937252370795573 0.8584439634428656 0.8757918212014976 1.1238521031962303 1.246944934925965 1.1073627704202231 1.0 18.942085184202583 -6.743129169543049 4.219135858695846 1.1439191924703664 0.8388165437888918 0.7748557992684151 0.07138899316108016 0.08594905584947017 3.4825607658098603 0.028761505830717505 0.020614400102441286 1.8066367092231697e-07 6.743129169543049 -0.30510264868147463 S(ph)MPVLGSVSSVTK ddPTM_KYSE-520_SHP099_60min_R1 6 SMPVLGSVSSVTK 13 0 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 S(1)MPVLGSVSSVTK;S(1)MPVLGSVSSVTK;S(1)MPVLGSVSSVTK;S(1)MPVLGSVSSVTK;S(1)MPVLGSVSSVTK;S(0.999)MPVLGS(0.001)VSSVTK 185.66 3.0819e-08 5218910000.0 4318410.0 4217120.0 4137010.0 4103120.0 4229490.0 4881980.0 4527990.0 4800890.0 5436720.0 4899870.0 True False 4078859.1887630876 4014523.2251738342 4403688.284050039 4493079.291151993 4562326.8004937675 4851509.75194147 4985723.418123826 4784236.833126147 4449548.696558144 4856460.963841173 0.8398830381078471 0.8266355387316002 0.9067690066568521 0.9251756216317311 0.9394344635862649 0.9989804897153366 1.0266165949330341 0.9851282381856312 0.9162121820163494 1.0 22.21147393463382 -5.198618060880176 0.9866553369367161 0.9852773669078306 0.8196370113848238 0.7812212548166558 0.030044354014174855 0.321522028708757 0.5623172373500794 0.012392096466641116 0.04124594452441196 6.329682689205099e-06 5.198618060880176 -0.16564035552300682 S(ph)MSDVSAEDVQNLR ddPTM_KYSE-520_SHP099_60min_R1 4 SMSDVSAEDVQNLR 14 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;E9PK58;E9PLU6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.994)MS(0.006)DVSAEDVQNLR;S(0.978)MS(0.021)DVSAEDVQNLR;S(0.989)MS(0.011)DVSAEDVQNLR;S(0.986)MS(0.014)DVSAEDVQNLR 310.9 1.9903999999999998e-42 1721120000.0 1533680.0 1280350.0 1239920.0 1149890.0 1324600.0 1269340.0 1127240.0 1223470.0 1482810.0 1326700.0 True False 1448603.7130847191 1218840.0641554685 1319847.2271421456 1259175.199872964 1428838.4840569547 1261417.5782222345 1241192.4200022325 1219226.0681300445 1213569.0825982187 1314946.4701569823 1.1016446265769133 0.9269123054187595 1.0037269631094399 0.9575866610924777 1.0866134222835517 0.9592919611941638 0.9439109866229423 0.927205856512539 0.9229037912496462 1.0 20.326572639707948 -6.5023907212114915 24.288093854550432 0.9437478898716176 1.0081791661705066 0.26727839485447 0.052861983475122776 734.904842494374 871215.330573359 0.0180594295152147 0.0157278438821477 3.144917656554215e-07 6.5023907212114915 0.064431276298889 S(ph)MSENAVR ddPTM_KYSE-520_SHP099_60min_R1 2 SMSENAVR 8 0 Q9GZY8-5;C9JHF5;A0A0A0MS29;Q9GZY8-4;Q9GZY8-3;Q9GZY8-2;Q9GZY8;H7C433 Q9GZY8-5 MFF Mitochondrial fission factor 1 S(0.893)MS(0.107)ENAVR;S(0.575)MS(0.425)ENAVR 114.4 0.0023444000000000004 1651380000.0 5988700.0 6606700.0 6076700.0 7069300.0 6769000.0 6879600.0 7018100.0 6919000.0 8486900.0 6501500.0 True False 5656494.872822525 6289304.215141129 6468413.805063767 7741164.146537447 7301681.789658406 6836661.864541962 7727558.038055491 6894999.60390674 6945892.89733871 6443901.768090457 0.877805881652776 0.9760087042737244 1.0038039122654991 1.2013162871089844 1.1331150058518253 1.0609506647659361 1.1992048166099565 1.0700038349513759 1.0779017352086373 1.0 22.619503070853302 -4.821977969242091 2.12598937872017 1.1113347957975868 0.9030327085660544 0.572322358936109 0.06276850040545034 0.22108767417840736 1.9380964549300104 0.017142620611051165 0.05712606052854772 1.506683494828608e-05 4.821977969242091 -0.20830208723153232 S(ph)MSIDDTPR ddPTM_KYSE-520_SHP099_60min_R1 1 SMSIDDTPR 9 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0C4DGY6;A0A1B0GVW2 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.999)MS(0.001)IDDTPR 153.1 0.033984 0.0 543200.0 513590.0 458240.0 404710.0 510270.0 506650.0 433020.0 472900.0 569760.0 475000.0 True False 513067.6131576459 488916.3654856933 487778.8836099238 443173.5167195013 550425.3459608499 503487.8094177255 476793.8874679457 471259.6202756893 466305.94648077694 470791.86954440805 1.0897970979281115 1.0384978949590284 1.0360817914760387 0.9413363853296077 1.1691479432164031 1.0694488201441494 1.0127487714036902 1.000993540376417 0.9904715366729417 1.0 18.84472988005266 -6.895153034003322 4.804020937039416 0.9986082903606804 1.0551826144558552 0.21588424830132635 0.05300497233472768 0.37634162253507275 14.356187414244019 0.023822819482640995 0.01578843331466636 1.2730544109323202e-07 6.895153034003322 0.05657432409517471 S(ph)MSVDLSHIPLKDPLLFK ddPTM_KYSE-520_SHP099_60min_R1 2 SMSVDLSHIPLKDPLLFK 18 1 A0A0C4DGH6;A0JNW5 A0A0C4DGH6 UHRF1BP1L UHRF1-binding protein 1-like 1 S(0.566)MS(0.434)VDLSHIPLKDPLLFK;S(0.5)MS(0.5)VDLSHIPLKDPLLFK 201.61 3.8475e-13 514480000.0 1862940.0 1626420.0 1409710.0 1140760.0 1103520.0 1324940.0 1032710.0 1124910.0 1265980.0 1062240.0 True False 1759599.0045211802 1548284.3418938082 1500582.1622157483 1249177.4874179997 1190360.7458300842 1316670.5579984607 1137106.4050783361 1121007.9497659681 1036109.9447587291 1052829.3800102137 1.6713049976854844 1.4705937840362966 1.4252852273187806 1.1864956574501 1.1306302506665764 1.2506020282086803 1.0800481318894282 1.0647574726258997 0.984119520628003 1.0 20.005840223581792 -1.0000000000152585 0.28090622235374446 0.9804003018047074 6.46963116248638 0.9344026435543458 0.055287499161538724 12.085024309084442 0.17050271257302702 0.06335126353073668 32.59991123579535 0.09999999999648661 1.0000000000152585 5.489230860681673 S(ph)MVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR ddPTM_KYSE-520_SHP099_60min_R1 3 SMVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR 32 0 Q14161-6;Q14161-3;Q14161;R4GNG3;F8VXI9;Q14161-11;Q14161-7;Q14161-4;Q14161-5;F8WAK2;Q14161-9;Q14161-10;Q14161-8 Q14161-6 GIT2 ARF GTPase-activating protein GIT2 1 S(1)MVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR;S(1)MVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR;S(1)MVWPGDGLVPDTAEPHVAPSPTLPSTEDVIR 211.37 1.9616e-22 1493720000.0 25207.0 41179.0 16671.0 8228.3 16123.0 32640.300000000003 11437.0 24287.7 24288.4 15282.0 True False 23808.717461091295 39200.69902906084 17745.6393345431 9010.3151580714 17391.78837267875 32436.579780395477 12593.16357436352 24203.45163749178 19878.23882073803 15146.613369216087 1.5718838845837335 2.58808342653891 1.1715912264988066 0.5948732524185193 1.1482295050869753 2.1415070808052343 0.8314177742172921 1.5979447713825436 1.312388342937338 1.0 13.886707637167614 -4.781682355156075 24.947568249432535 1.239565116864301 2.079983701242283 0.35575460025997363 0.46001477252653433 221.14407524475095 272539.4121567558 0.1206574518729124 0.2516533115649843 1.6531704921308108e-05 4.781682355156075 0.8404185843779819 S(ph)NDHFIVK ddPTM_KYSE-520_SHP099_60min_R1 2 SNDHFIVK 8 0 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 S(1)NDHFIVK;S(1)NDHFIVK 71.555 0.027074 183820000.0 562190.0 426140.0 350800.0 391740.0 401840.0 417460.0 367500.0 412500.0 457130.0 431890.0 True False 531004.2000020195 405667.59475081984 373413.1292998457 428970.85181907425 433462.5218431578 414854.4772910759 404650.48645436624 411069.1337782242 374126.71530952916 428063.79060533544 1.240479133381297 0.9476802375112257 0.8723305673011799 1.0021189860802198 1.0126119782992808 0.9691417176501196 0.9453041703951183 0.9602987750889215 0.8739975758764073 1.0 18.70746627931648 -4.2607321418208555 24.944416387266127 0.9535080645447239 1.2404792246533807 0.7763384559982714 0.04617498404543482 26.68788261343025 941094.2878210435 0.011774125654630159 0.06863545326917969 5.486152279525408e-05 4.2607321418208555 0.28697116010865675 S(ph)NEEGSEEKGPEVR ddPTM_KYSE-520_SHP099_60min_R1 2 SNEEGSEEKGPEVR 14 1 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 1 S(0.775)NEEGS(0.225)EEKGPEVR;S(0.543)NEEGS(0.457)EEKGPEVR 76.82 0.0090112 1055560000.0 1935900.0 1833160.0 1612640.0 1591050.0 1741740.0 1801540.0 1615250.0 1738600.0 2186400.0 1718970.0 True False 1828511.7678790279 1745092.2419707442 1716593.35471523 1742262.9136333757 1878805.0288550218 1790295.920612669 1778535.2333208607 1732569.2023922896 1789404.874658753 1703741.2631384213 1.0732332469959491 1.0242706916402031 1.0075434526678857 1.0226100355308614 1.1027525537499279 1.050802700707505 1.0438998407802034 1.0169203739309365 1.0502797070034757 1.0 20.70027482816878 -8.921382779378977 0.7523621922715289 0.9989666932954298 1.0438930713857477 0.1889715752999609 0.027032020563431524 8.364325892166526 5.334270194457388 0.05601613208094556 0.010167263493838738 1.198442551713597e-09 8.921382779378977 0.044926378090317964 S(ph)NEMLFSMCQVPLVCWAACT(ph)CLK ddPTM_KYSE-520_SHP099_60min_R1 1 SNEMLFSMCQVPLVCWAACTCLK 23 0 Q86W24 Q86W24 NLRP14 NACHT, LRR and PYD domains-containing protein 14 2 S(0.5)NEMLFS(0.5)MCQVPLVCWAACT(1)CLK 41.136 0.049234 39888000.0 33584.0 33256.0 32974.0 30744.0 35720.0 36038.0 29790.0 34734.0 40602.0 34276.0 True False 31721.028571955798 31658.331841726304 35099.556800265396 33665.90051647934 38530.960781001355 35813.07347438267 32801.46392238256 34613.51586097655 33229.70029312782 33972.3413063245 0.9337310103513653 0.931885487557862 1.033180388827986 0.990979697658103 1.1341862026397396 1.0541832590065108 0.9655343924228158 1.0188734285008694 0.9781398342110018 1.0 15.05207302887123 -4.758529648586264 24.935475667318073 1.0246067395697578 0.9328082072879615 0.3827773857608583 0.045139226088750616 73.85600495811956 632889.4505477427 0.012305691912961473 0.02975820606161662 1.7436943141941434e-05 4.758529648586264 -0.09179853228179624 S(ph)NENLDKIDMSLDDIIK ddPTM_KYSE-520_SHP099_60min_R1 29 SNENLDKIDMSLDDIIK 17 1 Q96QD9-4;Q96QD9;H9KVD1 Q96QD9-4 FYTTD1 UAP56-interacting factor 1 S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(0.996)NENLDKIDMS(0.004)LDDIIK;S(0.987)NENLDKIDMS(0.013)LDDIIK;S(0.995)NENLDKIDMS(0.005)LDDIIK;S(1)NENLDKIDMSLDDIIK;S(0.999)NENLDKIDMS(0.001)LDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(0.991)NENLDKIDMS(0.009)LDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK;S(1)NENLDKIDMSLDDIIK 302.53 1.9996e-38 22681808000.0 14351274.0 12984411.0 13053906.0 11868427.0 12169384.0 11871207.0 10720366.0 11798010.0 15891507.0 11962520.0 True False 13555180.222664557 12360620.405561747 13895381.667748066 12996398.73370732 13127045.286476642 11797114.393712338 11804085.215969672 11757085.45698622 13006009.921091128 11856541.379499719 1.1432659650732406 1.0425148455968445 1.1719591087307768 1.0961374247112607 1.1071563676380078 0.9949878312835705 0.9955757617798439 0.9916117256010711 1.0969480479002816 1.0 23.49917989312241 -6.252675353224918 23.64900961142823 1.0140348487357063 1.110761819416893 0.5635699746941514 0.042384016912958324 229.6024737429796 619564.0284401451 0.013688278247379582 0.013466245562794108 5.588878222626857e-07 6.252675353224918 0.09672697068118663 S(ph)NFSNSADDIK ddPTM_KYSE-520_SHP099_60min_R1 1 SNFSNSADDIK 11 0 P45973 P45973 CBX5 Chromobox protein homolog 5 1 S(1)NFSNSADDIK 114.7 0.00064864 0.0 273330.0 301550.0 262040.0 238340.0 252950.0 281750.0 253930.0 263180.0 289800.0 266040.0 True False 258167.84003015334 287063.085364222 278931.51767882385 260991.76194046624 272855.72591137444 279991.4937401441 279599.7225179794 262267.09000667377 237179.62526349525 263683.09257598815 0.9790837839015203 1.0886670152410178 1.0578286038511984 0.9897933135976614 1.0347865812926285 1.0618484901888665 1.0603627247636456 0.9946299076081022 0.8994874223691262 1.0 18.00844554264809 -7.520052630958082 6.117449960216557 0.948089937154186 1.039698086059862 0.46357192648958445 0.038607552047034754 0.11781980299790086 19.412446863132566 0.023860329946061954 0.009749014398310591 3.019585762904311e-08 7.520052630958082 0.09160814890567592 S(ph)NGDLSPK ddPTM_KYSE-520_SHP099_60min_R1 6 SNGDLSPK 8 0 P49006 P49006 MARCKSL1 MARCKS-related protein 1 S(1)NGDLSPK;S(1)NGDLSPK;S(1)NGDLSPK;S(0.998)NGDLS(0.002)PK;S(1)NGDLSPK;S(1)NGDLSPK 163.45 0.00019492 7292010000.0 11561420.0 10820110.0 9413560.0 10652460.0 11233900.0 11590460.0 11064830.0 11293500.0 14276700.0 11216530.0 True False 10920084.985480621 10300295.67428377 10020373.139828546 11664866.59562113 12117944.017852506 11518119.639877154 12183370.998734327 11254325.484422714 11684411.166319339 11117160.27052829 0.982272875423941 0.9265221894470627 0.9013428695808822 1.0492667472416328 1.090021527347888 1.0360667076476184 1.0959067515678957 1.012338152060113 1.0510248014769417 1.0 23.40628498223463 -5.273073835097766 24.464573383970635 1.0515919748911975 0.9356936010745133 0.6950797333227421 0.033650712168755675 273.1781056693353 574430.0428122312 0.009240191303020949 0.01384121897334834 5.332442300784305e-06 5.273073835097766 -0.11589837381668422 S(ph)NIDISSGLEDEEPKRPLPR ddPTM_KYSE-520_SHP099_60min_R1 5 SNIDISSGLEDEEPKRPLPR 20 2 Q9BZ71;Q9BZ71-3 Q9BZ71 PITPNM3 Membrane-associated phosphatidylinositol transfer protein 3 1 S(1)NIDISSGLEDEEPKRPLPR;S(0.959)NIDIS(0.02)S(0.02)GLEDEEPKRPLPR;S(1)NIDISSGLEDEEPKRPLPR;S(0.979)NIDIS(0.01)S(0.01)GLEDEEPKRPLPR;S(1)NIDISSGLEDEEPKRPLPR 278.86 2.4207e-36 2320430000.0 1149570.0 1038950.0 953885.0 954595.0 1035200.0 926323.0 933872.0 1043085.0 1341740.0 992000.0 True False 1085801.0604890205 989037.2825042572 1015373.953369963 1045319.4217905467 1116664.3505177111 920541.4745549303 1028276.8954724142 1039466.7815928682 1098113.8385129136 983211.6517643214 1.1043411238471472 1.0059251034398158 1.0327114732091793 1.0631682607857385 1.135731404844436 0.936259728923134 1.0458347331698374 1.057215686701434 1.1168641426720343 1.0 19.907142487221225 S(ph)NPDFLK ddPTM_KYSE-520_SHP099_60min_R1 8 SNPDFLK 7 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)NPDFLK;S(1)NPDFLK;S(1)NPDFLK;S(1)NPDFLK;S(1)NPDFLK;S(1)NPDFLK;S(1)NPDFLK;S(1)NPDFLK 123.51 0.002369 6140770000.0 9882510.0 8001410.0 7073710.0 8411470.0 9142530.0 8666360.0 8956430.0 10025960.0 9419110.0 8861570.0 True False 9334307.47000472 7617010.253238743 7529692.664936172 9210893.579799326 9861995.097120056 8612270.032616979 9861833.350733297 9991182.284836663 7708837.0604404425 8783063.383997135 1.0627621664454752 0.8672384474780227 0.8572968605299351 1.0487108172965829 1.1228423006816448 0.9805542390037462 1.1228238849672536 1.1375509714572638 0.8776934337609418 1.0 23.066292784492884 -5.2844131785901896 22.401102690016398 1.0514291492389176 0.9229131187105037 0.23764850994967923 0.09079462302742834 252.41341584568391 246120.46432706382 0.025113503948026618 0.03729665011681996 5.1950151858905075e-06 5.2844131785901896 -0.12851603052841387 S(ph)NPDFLKK ddPTM_KYSE-520_SHP099_60min_R1 6 SNPDFLKK 8 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)NPDFLKK;S(1)NPDFLKK;S(1)NPDFLKK;S(1)NPDFLKK;S(1)NPDFLKK;S(1)NPDFLKK 117.98 0.0010351 11545150000.0 12493960.0 10523150.0 10049910.0 10287080.0 11123350.0 10935610.0 10099910.0 11222770.0 13331500.0 11037500.0 True False 11800895.132708214 10017602.078429816 10697743.279024532 11264760.990276607 11998694.361795973 10867356.801631436 11120907.468422648 11183840.830284217 10910835.659766342 10939716.33704506 1.0787203954043079 0.9157094909771383 0.9778812310515642 1.0297123474884673 1.0968012325113865 0.9933856113646572 1.0165626900913345 1.0223154317459293 0.9973600158917357 1.0 23.38307199425754 -5.261916681942079 24.70162353215547 1.024894873694677 0.9832642830604885 0.08064572347063026 0.04620071958439468 71.58965948788074 3705057.58036399 0.01261109529974969 0.020047829506392542 5.4712091628780015e-06 5.261916681942079 -0.0416305906341885 S(ph)NPEGAEDR ddPTM_KYSE-520_SHP099_60min_R1 2 SNPEGAEDR 9 0 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R2I2 M0R3H9 BABAM1 BRISC and BRCA1-A complex member 1 1 S(1)NPEGAEDR;S(1)NPEGAEDR 136.01 0.00053995 2130900000.0 1394200.0 1140710.0 1089510.0 1192140.0 1273570.0 1292760.0 1260730.0 1315380.0 1437210.0 1181370.0 True False 1316860.9467312042 1085908.5793593824 1159741.557877636 1305440.6271700398 1373792.713377937 1284691.4053150248 1388176.8919390854 1310817.2537920012 1176248.893115762 1170903.9808919535 1.1246532322215403 0.927410442769334 0.99046683315073 1.1148998111489903 1.1732752948123295 1.0971791250862364 1.1855599729720119 1.119491670694865 1.0045647741497445 1.0 20.15919134288258 -5.265320588418501 23.414061760659784 1.1108507581013778 1.005500190255886 0.20685063470181397 0.07339095646818322 167.01965925129647 1007583.6987732791 0.020027612034364425 0.031052912039806695 5.42849461790238e-06 5.265320588418501 -0.1053505678454918 S(ph)NPSIQATLNK ddPTM_KYSE-520_SHP099_60min_R1 5 SNPSIQATLNK 11 0 Q6UUV7;Q6UUV7-3 Q6UUV7 CRTC3 CREB-regulated transcription coactivator 3 1 S(1)NPSIQATLNK;S(0.999)NPS(0.001)IQATLNK;S(1)NPSIQATLNK;S(1)NPSIQATLNK;S(1)NPSIQATLNK 214.72 1.1162000000000001e-09 8296400000.0 7081690.0 6493570.0 6359940.0 6144000.0 6273820.0 6356590.0 5728720.0 6594340.0 8215240.0 6461390.0 True False 6688854.53870097 6181609.150152718 6769911.908663798 6727923.912739041 6767533.940847201 6316916.163952665 6307834.924519347 6571465.773670531 6723559.505347406 6404147.111485353 1.044456728157449 0.9652509604388179 1.0571137406451008 1.0505573647227777 1.0567424237819494 0.9863789906736768 0.98496096587268 1.026126611283664 1.0498758676685005 1.0 22.61057501811724 -6.2621495274448185 24.99848760436232 1.0095696813685904 1.033071427954542 0.14605784090355944 0.03050744948602109 166.69552178392033 5867872.758648162 0.011135431105816005 0.010356268954418626 5.468276578994944e-07 6.2621495274448185 0.02350174658595172 S(ph)NS(ph)PLPVPPSK ddPTM_KYSE-520_SHP099_60min_R1 4 SNSPLPVPPSK 11 0 Q13247;Q13247-3 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 S(1)NS(1)PLPVPPSK;S(1)NS(1)PLPVPPSK;S(1)NS(1)PLPVPPSK;S(1)NS(1)PLPVPPSK 123.1 0.0001639 454120000.0 3901640.0 3417590.0 2990200.0 3301520.0 3594570.0 3407020.0 3568190.0 3578830.0 3870330.0 3432530.0 True False 3685208.251473486 3253403.8464928237 3182953.0764891575 3615295.4681618144 3877442.2086944054 3385755.5244101 3928897.4673785255 3566415.874035201 3167575.635079588 3402120.4546679268 1.0832092221829315 0.9562870832597786 0.9355791833066764 1.0626594549882553 1.1397133818040766 0.9951897851719587 1.1548378488444837 1.0482920641865723 0.9310592253526684 1.0 21.698002790947353 -3.899540962193107 19.477854274367004 1.0307829841069678 5.83062625480829 0.0473054389426153 0.07439813013333862 1491.3176347013984 298099.9752318825 0.01873596791482542 9828.281554701865 0.00012602567662122892 3.899540962193107 4.799843270701322 S(ph)NSAPLIHGLSDTSPVFQAEAPSAR ddPTM_KYSE-520_SHP099_60min_R1 5 SNSAPLIHGLSDTSPVFQAEAPSAR 25 0 Q96E09 Q96E09 FAM122A Protein FAM122A 1 S(0.5)NS(0.5)APLIHGLSDTSPVFQAEAPSAR;S(0.5)NS(0.5)APLIHGLSDTSPVFQAEAPSAR;S(0.5)NS(0.5)APLIHGLSDTSPVFQAEAPSAR;S(0.5)NS(0.5)APLIHGLSDTSPVFQAEAPSAR;S(0.5)NS(0.5)APLIHGLSDTSPVFQAEAPSAR 205.44 3.0448e-16 4044160000.0 721293.0 915904.0 697416.0 979040.0 659860.0 699834.0 659539.0 709215.0 893568.0 777793.0 True False 681281.439428053 871902.5970400678 742372.5512650539 1072087.667240891 711787.2279101781 695466.0764157587 726211.6386003435 706754.8986970256 731318.5762161864 770902.3591337968 0.8837454333303068 1.1310156036099788 0.962991671343697 1.3906919009114367 0.9233169667686039 0.9021454768891874 0.9420280402518566 0.9167891242298847 0.9486526634033295 1.0 19.55618861743837 S(ph)NSEGDLDGLILK ddPTM_KYSE-520_SHP099_60min_R1 1 SNSEGDLDGLILK 13 0 F5H1B1;F5H630;P51523 F5H1B1 ZNF84 Zinc finger protein 84 1 S(0.594)NS(0.406)EGDLDGLILK 96.993 0.0018254 15439000.0 103390.0 83479.0 80063.0 67818.0 66534.0 72987.0 77737.0 78541.0 95905.0 83444.0 True False 97654.7505971447 79468.54353546634 85223.9890853294 74263.40232977472 71769.84727332438 72531.46105984706 85595.41460000841 78268.55960260719 78491.06956830756 82704.75107844961 1.180763490896844 0.9608703550789535 1.0304606201461168 0.8979339319857471 0.8677838496272975 0.8769926771322645 1.0349516017382951 0.9463611047975409 0.949051518138962 1.0 16.3356825887578 S(ph)NSELEDEILCLEK ddPTM_KYSE-520_SHP099_60min_R1 3 SNSELEDEILCLEK 14 0 Q96PC5;Q96PC5-12;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-6;G3V599;Q96PC5-14;Q96PC5-7;Q96PC5-5;Q96PC5-8;A0A5F9ZHA4;A0A2R8YE69;A4FU28;G3V5K6;Q8IX94;Q86UF2;A4D2H0;P0CG41 Q96PC5 MIA2;CTAGE9;CTAGE5;CTAGE4;CTAGE6;CTAGE15;CTAGE8 Melanoma inhibitory activity protein 2;cTAGE family member 9;cTAGE family member 4;cTAGE family member 6;cTAGE family member 15;cTAGE family member 8 1 S(0.855)NS(0.145)ELEDEILCLEK;S(0.5)NS(0.5)ELEDEILCLEK;S(0.5)NS(0.5)ELEDEILCLEK 143.14 0.00047315 118629000.0 284337.0 271110.0 271810.0 268945.0 263466.0 289188.0 269442.0 290973.0 369335.0 260449.0 True False 268564.2597982429 258085.46865559343 289331.3075113768 294505.4519387371 284199.2752835194 287383.0704231583 296679.82686051016 289963.6825766087 302273.07417768496 258141.62448625572 1.0403756477969406 0.9997824611556775 1.1208239201531085 1.1408677408180545 1.1009432355170257 1.113276756490155 1.149290926835034 1.123273641566656 1.170958286092985 1.0 17.97780326444712 -4.768592056551051 24.907755932966655 1.120927006873943 1.0200790474678947 0.41831627546351846 0.04428985883551251 113.03636717186882 393631.76514535415 0.01067849626823718 0.022989870660581502 1.703758138760531e-05 4.768592056551051 -0.1008479594060483 S(ph)NSEVEDVGPTSHNR ddPTM_KYSE-520_SHP099_60min_R1 1 SNSEVEDVGPTSHNR 15 0 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 S(0.5)NS(0.5)EVEDVGPTSHNR 90.853 0.0031747 526310000.0 547010.0 672140.0 975480.0 415330.0 457370.0 778070.0 481820.0 592250.0 734790.0 700980.0 True False 516666.2648626001 639849.385497291 1038361.0016231834 454802.83832648234 493362.41692067735 773213.7765195882 530527.0677100495 590195.622982189 601370.6585485289 694769.8625541879 0.7436509450239764 0.9209515553035184 1.4945394980229119 0.6546093358950359 0.7101091217556922 1.1129063279702667 0.7636011524156627 0.8494836273013457 0.8655681412802007 1.0 19.406175649200986 S(ph)NSFSDER ddPTM_KYSE-520_SHP099_60min_R1 1 SNSFSDER 8 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.89)NS(0.001)FS(0.108)DER 79.20100000000001 0.019469999999999998 170550000.0 681510.0 683850.0 696480.0 640000.0 794300.0 739820.0 784310.0 868500.0 1011300.0 822050.0 True False 643705.2817434974 650996.8195202239 741376.2152074015 700825.4075769841 856806.8910512158 735202.5089577058 863595.7089279584 865487.3762094243 827673.4127983872 814767.2765452213 0.7900480300005892 0.7989972575734541 0.9099238967364855 0.8601540927718969 1.051597082647024 0.9023466333541447 1.059929299799299 1.0622510269180994 1.0158402731978762 1.0 19.63602851301999 -5.210553937212571 0.6495151913683703 1.0351067106749225 0.7439921425750886 0.7298716663530667 0.052475106364884484 0.6297502774734841 0.4284093253349239 0.028502962637457042 0.11664857073016727 6.1580904394837084e-06 5.210553937212571 -0.29111456809983394 S(ph)NSGRELTDEEILASVMIK ddPTM_KYSE-520_SHP099_60min_R1 6 SNSGRELTDEEILASVMIK 19 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 S(0.49)NS(0.309)GRELT(0.201)DEEILASVMIK;S(0.491)NS(0.491)GRELT(0.019)DEEILASVMIK;S(0.669)NS(0.33)GRELT(0.001)DEEILASVMIK;S(0.495)NS(0.495)GRELT(0.01)DEEILASVMIK;S(0.499)NS(0.499)GRELT(0.002)DEEILASVMIK;S(0.498)NS(0.498)GRELT(0.004)DEEILASVMIK 265.62 2.2618999999999996e-35 1230157000.0 2912210.0 3240937.0 3164460.0 1977064.0 2439009.0 2251126.0 2035690.0 2180605.0 3869292.0 2346023.0 True False 2750663.905953295 3085237.5217743884 3368446.15491502 2164963.5681340345 2630945.132237105 2237075.8876212076 2241477.411619838 2173040.9902120335 3166726.109713736 2325239.0613982747 1.1829596154724806 1.326847451082768 1.4486450923843572 0.9310713913571282 1.131472963754099 0.9620842539415924 0.9639771879076954 0.9345451942069486 1.3618927026838419 1.0 21.148947618862554 -5.264396946967084 24.999976575291175 1.0353004431626762 1.3202203950467712 0.4697154183671265 0.1356458964924488 217.82268095212777 1841234.2781533867 0.03717356046975729 0.057936903675299904 5.440052025180943e-06 5.264396946967084 0.284919951884095 S(ph)NSLRLS(ph)LIGDR ddPTM_KYSE-520_SHP099_60min_R1 1 SNSLRLSLIGDR 12 1 O94915;H0Y9X0;A0A2C9F2R7;A0A286YEZ9 O94915 FRYL Protein furry homolog-like 2 S(0.5)NS(0.5)LRLS(1)LIGDR 99.09200000000001 0.0010335999999999998 64388000.0 73341.0 65699.0 61873.0 65404.0 63054.0 64394.0 60648.0 65176.0 78589.0 66470.0 True False 69272.62852834113 62542.72142379051 65861.43258030018 71619.97649557036 68015.99107181588 63992.09316025852 66778.89170744074 64949.91966819278 64319.21866747004 65881.12751287755 1.0514790979374276 0.94932682218539 0.9997010534986137 1.0871091494536287 1.0324047817566728 0.9713266238157539 1.0136270314193956 0.9858653323062398 0.9762920140505761 1.0 16.00757762561732 -6.252003906596386 24.5636563652906 0.9900515851744863 1.0220110971451353 0.19557989451296187 0.03493871498059528 1073.7621676342205 2795352.163303176 0.012400266413238742 0.012252827742133626 5.597525663466595e-07 6.252003906596386 0.031959511970648946 S(ph)NSLSTPRPTR ddPTM_KYSE-520_SHP099_60min_R1 1 SNSLSTPRPTR 11 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(0.497)NS(0.497)LS(0.006)TPRPTR 59.426 0.034527999999999996 763750000.0 1237700.0 1099600.0 1230900.0 1149700.0 1139600.0 1178500.0 1132100.0 1193700.0 1394400.0 1235600.0 True False 1169042.3137062197 1046773.5654667516 1310245.7835096333 1258967.14233009 1229280.0365629655 1171144.5443576216 1246543.7162312623 1189559.333311675 1141212.1099634855 1224653.5452822535 0.9545902334662194 0.8547507737998629 1.0698909814592932 1.0280190239762284 1.0037777960130314 0.9563068256073195 1.017874582597941 0.9713435590777715 0.931865272721244 1.0 20.223942237574626 -4.75258430362876 24.99998463671891 0.9969484280297581 0.9046705169017663 0.4289580316078073 0.04278668590168954 179.69262693080492 507304.0699795108 0.011087861191902713 0.0284087274635322 1.7677290394439666e-05 4.75258430362876 -0.09227791112799189 S(ph)NSPDKFK ddPTM_KYSE-520_SHP099_60min_R1 1 SNSPDKFK 8 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 S(0.984)NS(0.016)PDKFK 153.11 0.00055534 18369000000.0 11502000.0 9112700.0 9461300.0 9746200.0 10380000.0 9262900.0 10019000.0 10338000.0 11436000.0 9491900.0 True False 10863961.131331459 8674912.21355844 10071190.536615249 10672475.91769813 11196846.945878899 9205086.805201702 11031818.296017138 10302139.890907336 9359510.678099832 9407809.150586445 1.1547811990482655 0.9220969595261911 1.0705139076920422 1.1344273408259828 1.1901651879471782 0.9784516945295275 1.1726235215272687 1.095062593852166 0.9948661296468155 1.0 23.165427362885435 -4.986335877310391 24.988245261352034 1.0899243846310638 1.0279056790417171 0.025568110458634163 0.08702631230266628 606.4607205494507 1109048.3666449324 0.021796226053476576 0.045336208824941486 1.0319629912391158e-05 4.986335877310391 -0.062018705589346634 S(ph)NSRLEDQVIGVALQASK ddPTM_KYSE-520_SHP099_60min_R1 2 SNSRLEDQVIGVALQASK 18 1 A0A3B3IRW6;Q2KHR3-2;Q2KHR3 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 S(0.5)NS(0.5)RLEDQVIGVALQASK;S(0.5)NS(0.5)RLEDQVIGVALQASK 133.86 5.9159e-06 36674000.0 135877.0 127070.0 134991.0 112674.0 123236.0 140479.0 127889.0 166241.0 179916.0 136948.0 True False 128339.63194591574 120965.36646404133 143692.7358532366 123382.50308332674 132933.97208307637 139602.21845296092 140817.26819636044 165664.348771941 147247.78971327477 135734.7472639319 0.9455178908342711 0.8911893888808591 1.058628971208313 0.908997184364394 0.9793658201948133 1.0284928602807124 1.0374445087560795 1.2205006611152556 1.0848201560869017 1.0 17.05043056356766 -6.638309928484318 1.7308373987691867 1.1120701889530693 0.9555179207183204 0.4492430260487298 0.06744016155450706 0.29613054947412 1.811049331215262 0.03306972793419287 0.022627020497030383 2.2998000099432578e-07 6.638309928484318 -0.15655226823474888 S(ph)NTLDIMDGR ddPTM_KYSE-520_SHP099_60min_R1 5 SNTLDIMDGR 10 0 O94915;H0Y9X0;A0A2C9F2R7;A0A286YEZ9 O94915 FRYL Protein furry homolog-like 1 S(0.889)NT(0.111)LDIMDGR;S(0.99)NT(0.01)LDIMDGR;S(1)NTLDIMDGR;S(0.999)NT(0.001)LDIMDGR;S(1)NTLDIMDGR 164.06 6.5098e-05 1117367000.0 3135730.0 2769790.0 2435780.0 2200150.0 2373260.0 2637620.0 2221350.0 2598170.0 2930420.0 2680280.0 True False 2961784.8059772174 2636725.1308604516 2592794.2761857957 2409251.5945007843 2560022.0599977383 2621157.635204538 2445905.7362868227 2589157.5546874353 2398329.597876646 2656534.8044262873 1.1149053274372036 0.9925430400788166 0.9760061384724612 0.9069151251045224 0.9636696856868803 0.986682964152096 0.9207128520249322 0.9746371665725633 0.9028037554337994 1.0 21.341114183638744 -4.1474026237117885 1.6461118939454613 0.9507982786033825 1.208773984139755 0.7019658853615742 0.03162354592141678 0.6972444610008397 1.4694692703463466 0.008288782225762816 0.31138980414617534 7.12192467892029e-05 4.1474026237117885 0.2579757055363724 S(ph)NTPILVDGKDVMPEVNK ddPTM_KYSE-520_SHP099_60min_R1 2 SNTPILVDGKDVMPEVNK 18 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YXP8;A0A2R8Y6C7;K7ERC6;A0A0J9YYH3;A0A0J9YX90;K7EP41;K7EPY4;K7EQ48 P06744-2 GPI Glucose-6-phosphate isomerase 1 S(0.58)NT(0.42)PILVDGKDVMPEVNK;S(0.585)NT(0.415)PILVDGKDVMPEVNK 122.01 3.7861e-05 1083740000.0 1590690.0 1917900.0 1517910.0 1074610.0 1139200.0 1482500.0 1087660.0 1342370.0 1983880.0 1549650.0 True False 1502451.254738099 1825761.2051734095 1615756.9073418712 1176740.6113067216 1228848.5588386564 1473247.167594548 1197611.287338658 1337713.631781512 1623657.4015450096 1535921.3066094567 0.9782084852086317 1.1887075186187592 1.0519789655816751 0.7661464205509163 0.8000726036878395 0.9591944335004626 0.7797347964280688 0.8709519335560962 1.0571227800265564 1.0 20.550672870362003 -5.109427173922084 6.3793971210588305 0.8801311300091873 1.0921071533142008 0.40091591675133065 0.10195927776944093 0.20698604301110415 10.406944763581947 0.02733828380600659 0.048056019558431536 7.77271647181704e-06 5.109427173922084 0.21197602330501353 S(ph)NTPTPR ddPTM_KYSE-520_SHP099_60min_R1 1 SNTPTPR 7 0 H7C4E4;Q04727-4;Q04727;Q04727-3;H0Y5S0;H7C4W5;H7C4P7;Q5JSY7;Q04727-2;H0YKH0;H0YLW9;H0YLI3;H0YNT2;A0A0D9SES8;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726 H7C4E4;H0YKH0 TLE4;TLE3 Transducin-like enhancer protein 4;Transducin-like enhancer protein 3 1 S(0.978)NT(0.011)PT(0.011)PR 71.692 0.031655 1263600000.0 937290.0 726020.0 794650.0 772030.0 818940.0 813370.0 1010000.0 744400.0 964190.0 868970.0 True False 885296.6552587075 691140.9094217634 845874.4104849558 845403.4990807156 883385.9188687924 808293.4561257181 1112100.656650095 741817.8501442671 789117.4012519304 861271.6018484309 1.0278948630823481 0.8024656890328916 0.9821227225762115 0.9815759596233525 1.0256763568808034 0.9384884563603246 1.291231075381266 0.8613053635487384 0.916223639045284 1.0 19.71610873743664 -4.979536084790606 24.743852513606676 1.0047655007376748 0.9094587071287576 0.07601605290774294 0.11888986583419336 505.53505090770267 611257.122035155 0.030868490981011663 0.06424660753070363 1.0482476928427698e-05 4.979536084790606 -0.09530679360891714 S(ph)PAAGSSQSSGWPNDVDAGPASLKK ddPTM_KYSE-520_SHP099_60min_R1 3 SPAAGSSQSSGWPNDVDAGPASLKK 25 1 K7EN08;Q14938-6;Q14938-5;Q14938-3;Q14938-4;Q14938 K7EN08 NFIX Nuclear factor 1;Nuclear factor 1 X-type 1 S(0.998)PAAGS(0.001)SQSSGWPNDVDAGPASLKK;S(1)PAAGSSQSSGWPNDVDAGPASLKK;S(1)PAAGSSQSSGWPNDVDAGPASLKK 313.13 3.6214999999999996e-61 6911580000.0 3484350.0 3126450.0 2879720.0 2796950.0 3037150.0 2811530.0 2867030.0 2892960.0 3773750.0 2931810.0 True False 3291066.1596204787 2976250.649102873 3065351.3589149113 3062771.287066318 3276156.4259803537 2793982.1983858966 3156857.3719163584 2882924.9969819407 3088532.128495916 2905836.4443136635 1.1325710247941376 1.0242319917650564 1.0548946637768954 1.0540067707732674 1.1274400637349558 0.961507040030883 1.0863850847813232 0.9921153692677517 1.0628719777191051 1.0 21.47052207215108 -6.255557564103458 24.99572108591792 1.0241961797734815 1.0729203835971484 0.28572047573326265 0.04526770128972864 742.038989877178 3153417.588902637 0.014367720840348139 0.014037865356787933 5.551910237561124e-07 6.255557564103458 0.04872420382366682 S(ph)PAEGSERLSLS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 1 SPAEGSERLSLSPLR 15 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 2 S(0.899)PAEGS(0.079)ERLS(0.022)LS(1)PLR 107.63 0.0013564999999999998 541570000.0 690170.0 688870.0 586990.0 696830.0 722120.0 696630.0 618770.0 726270.0 847010.0 693160.0 True False 651884.8942802141 655775.6511850489 624828.3146172065 763056.5136904217 778946.7356992364 692282.0737682215 681321.3102132473 723750.7388826929 693214.3353845183 687019.1416703203 0.9488598712043368 0.9545231150193131 0.9094773008770731 1.1106772248517487 1.1338064523288485 1.0076605319687393 0.9917064443892785 1.0534651729252675 1.0090174979683038 1.0 19.389990770289693 -5.249692341359494 24.996547426315193 1.0460682748708736 0.939310393067252 0.5285139741361731 0.045896695066383726 644.8372940039422 1372147.4461004422 0.013537358429438089 0.02322419782752726 5.627398346580553e-06 5.249692341359494 -0.10675788180362167 S(ph)PAFALK ddPTM_KYSE-520_SHP099_60min_R1 9 SPAFALK 7 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 S(1)PAFALK;S(1)PAFALK;S(1)PAFALK;S(1)PAFALK;S(1)PAFALK;S(1)PAFALK;S(1)PAFALK;S(1)PAFALK;S(1)PAFALK 109.11 0.0031271999999999997 24219460000.0 15489610.0 15815590.0 15535690.0 14875240.0 15321170.0 12787280.0 14271200.0 14931620.0 17147850.0 16018020.0 True False 14630370.455527993 15055785.316715438 16537145.435382893 16288978.337196019 16526858.913467374 12707469.842319328 15713872.169489972 14879825.695286298 14034232.702120857 15876112.804631002 0.9215335413376736 0.9483294495314825 1.0416369320932937 1.0260054547133595 1.040989007627015 0.800414433853897 0.9897808338138222 0.9372461558062191 0.8839841890029355 1.0 23.92035438248729 S(ph)PAFVQLAPLSSK ddPTM_KYSE-520_SHP099_60min_R1 1 SPAFVQLAPLSSK 13 0 P51610-2;P51610;A6NEM2;P51610-4 P51610-2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 S(1)PAFVQLAPLSSK 73.38600000000001 0.016949000000000002 53882000.0 230660.0 208520.0 203630.0 198520.0 197940.0 217980.0 190890.0 237320.0 251050.0 233650.0 True False 217864.82999068976 198502.38620509885 216756.31561951965 217387.28111278574 213516.75187545968 216619.50596442475 210187.0241068681 236496.79231090436 205465.6484554884 231580.04277694906 0.9407754976560334 0.8571653404360512 0.9359887536953814 0.938713364528422 0.9219997946071398 0.9353979875246251 0.9076214927091707 1.0212313180142685 0.887233830651749 1.0 17.821151403811786 -13.999996375389072 0.06678938496578814 1.2609656305998014 0.8300289632465585 0.24855423588374392 0.03969237998320966 425.2229086311091 2.0504941119235633 17.27114521577479 2.3571257192764183 1.0000083460099181e-14 13.999996375389072 -0.4309366673532429 S(ph)PAGGESATVAAK ddPTM_KYSE-520_SHP099_60min_R1 7 SPAGGESATVAAK 13 0 Q147X3 Q147X3 NAA30 N-alpha-acetyltransferase 30 1 S(1)PAGGESATVAAK;S(1)PAGGESATVAAK;S(1)PAGGESATVAAK;S(1)PAGGESATVAAK;S(1)PAGGESATVAAK;S(1)PAGGESATVAAK;S(1)PAGGESATVAAK 259.41 4.876099999999999e-22 8225080000.0 8621770.0 7262020.0 5867220.0 6305020.0 6374240.0 7801110.0 6963920.0 7934670.0 8050270.0 7855100.0 True False 8143503.231027604 6913141.658685746 6245430.389083925 6904247.205126615 6875856.423535554 7752420.378815167 7667900.9949096395 7907146.481735903 6588543.898792128 7785509.925175326 1.0459819985194119 0.887949758606218 0.8021864269787417 0.8868073217402179 0.883160703617074 0.9957498549641353 0.9848938693295625 1.015623454048559 0.8462572088550459 1.0 22.892360103481316 -6.254751357706244 24.48648330966937 0.9705056554787722 0.8941778934868642 0.178361041302603 0.07135048044717174 669.031631855162 2449489.38745257 0.024209818056416046 0.02366941791938923 5.56222614721821e-07 6.254751357706244 -0.07632776199190805 S(ph)PAGS(ph)PELR ddPTM_KYSE-520_SHP099_60min_R1 1 SPAGSPELR 9 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 2 S(1)PAGS(1)PELR 96.113 0.011854 0.0 566790.0 481630.0 541170.0 543580.0 496820.0 520980.0 504920.0 548080.0 597650.0 526790.0 True False 535349.0288321471 458491.7718586313 576054.6841026149 595241.6797667134 535916.9074808826 517728.3705722818 555962.241144323 546178.8384028333 489131.82553046267 522123.05043641874 1.025331152081245 0.878129727226942 1.1032929567486385 1.1400409908529765 1.0264187858263185 0.9915830571730867 1.0648107580763186 1.0460730242541627 0.9368133146422473 1.0 18.994030325932926 -9.724709464446876 13.899961615990566 0.9999994191793817 1.0261125583314241 0.008508320343964648 0.07204077772119795 0.0 0.0 0.0724258472332226 0.017565848127495613 1.8849096399915206e-10 9.724709464446876 0.026113139152042386 S(ph)PAHLAR ddPTM_KYSE-520_SHP099_60min_R1 1 SPAHLAR 7 0 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(1)PAHLAR 56.122 0.056614 265740000.0 355440.0 327330.0 309600.0 301260.0 334350.0 331940.0 303910.0 329530.0 388490.0 365380.0 True False 335723.03464792675 311604.57546765317 329557.3113775147 329891.65982287814 360661.4428087296 329868.23933310923 334632.18867577316 328386.9373428802 317950.00903593964 362143.0174613385 0.9270454446460996 0.8604461785623668 0.9100197863477996 0.9109430360840702 0.9959088686480968 0.9108783641488412 0.9240332480288611 0.9067879857104741 0.8779680780946804 1.0 18.466200033167528 -5.279247031414642 3.182646626900745 0.9305810889634537 0.8937909777693456 0.13776891865519447 0.03931133280741209 0.512662584132132 10.7018833944241 0.011302641056875612 0.01927238612373991 5.257181471399962e-06 5.279247031414642 -0.03679011119410813 S(ph)PAKS(ph)PNPS(ph)TPR ddPTM_KYSE-520_SHP099_60min_R1 1 SPAKSPNPSTPR 12 1 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 3 S(1)PAKS(0.995)PNPS(0.86)T(0.145)PR 125.39 0.00087217 90919000.0 265160.0 263300.0 254230.0 255720.0 237070.0 230350.0 222930.0 262010.0 295920.0 254350.0 True False 250451.04621664458 250650.6727786429 270618.0725823822 280023.5519149783 255726.0602562152 228912.30020600592 245465.93998713457 261101.148463594 242188.38753614054 252096.65688130545 0.993472302707149 0.9942641678769134 1.073469501461089 1.110778521933441 1.0143968722941794 0.9080338590677329 0.9736977198499985 1.0357184093342742 0.9606965460480897 1.0 17.943617460809616 -6.004384456019548 24.99704555807355 0.9759048010444438 1.0443039106702536 0.3439272801823522 0.043997962677054456 235.41068200729885 1342156.82966862 0.014926348066777157 0.016516148004982165 9.89955206267585e-07 6.004384456019548 0.06839910962580986 S(ph)PAKS(ph)PNPSTPR ddPTM_KYSE-520_SHP099_60min_R1 3 SPAKSPNPSTPR 12 1 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 2 S(1)PAKS(0.786)PNPS(0.171)T(0.043)PR;S(1)PAKS(0.988)PNPS(0.01)T(0.002)PR;S(1)PAKS(0.937)PNPS(0.059)T(0.004)PR 103.79 0.0020741999999999996 1090110000.0 1272360.0 1089240.0 1109020.0 1063430.0 1077970.0 1151890.0 1043410.0 1098140.0 1301570.0 1186680.0 True False 1201779.654413222 1036911.2754174287 1180509.2036947396 1164498.0674681112 1162800.1061897003 1144700.6272381004 1148888.065500275 1094330.808647803 1065237.697909618 1176166.9384230687 1.0217764291389566 0.8816021276772621 1.0036918783633664 0.9900788990289062 0.9886352593354734 0.973246730411283 0.9768069718407767 0.9304213312737846 0.9056858028485499 1.0 20.165661411932525 -9.657824890324733 5.304006620818485 1.0000000023418039 0.9635388084576992 0.06306322962937472 0.04214942806851353 53830259.673880756 7.498933663735213 1.8276603871767019 0.010071932467886308 2.1987462393980707e-10 9.657824890324733 -0.036461193884104626 S(ph)PAKSPNPSTPR ddPTM_KYSE-520_SHP099_60min_R1 7 SPAKSPNPSTPR 12 1 O76021-2;O76021;J3QSV6 O76021-2 RSL1D1 Ribosomal L1 domain-containing protein 1 1 S(0.999)PAKS(0.001)PNPSTPR;S(0.999)PAKS(0.001)PNPSTPR;S(0.989)PAKS(0.011)PNPSTPR;S(1)PAKSPNPSTPR;S(1)PAKSPNPSTPR;S(0.999)PAKS(0.001)PNPSTPR;S(1)PAKSPNPSTPR 174.59 2.3385e-06 12190730000.0 10147460.0 9585210.0 9738020.0 6520110.0 7310820.0 7778160.0 6095870.0 6559920.0 10548750.0 7749080.0 True False 9584560.165339988 9124722.123906476 10365748.350582885 7139779.294057439 7886139.941124315 7729613.618278045 6712100.029558044 6537165.16861684 8633362.912347464 7680429.17989302 1.2479198676073842 1.1880484684104038 1.3496313953027386 0.9296068132167699 1.0267837586172706 1.006403865882103 0.8739225207791755 0.8511458169200768 1.1240729795346824 1.0 22.87275549985437 -5.268573720083192 24.999797354717455 0.966419293166509 1.2544847694388752 0.7198899697543648 0.08242181124334133 280.85050390356724 984142.5050713932 0.023220368489853344 0.03528065065383607 5.387983783288893e-06 5.268573720083192 0.2880654762723662 S(ph)PALKS(ph)PLQSVVVR ddPTM_KYSE-520_SHP099_60min_R1 6 SPALKSPLQSVVVR 14 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 S(1)PALKS(0.997)PLQS(0.003)VVVR;S(1)PALKS(0.986)PLQS(0.014)VVVR;S(1)PALKS(0.998)PLQS(0.002)VVVR;S(1)PALKS(0.998)PLQS(0.002)VVVR;S(1)PALKS(0.976)PLQS(0.024)VVVR;S(1)PALKS(0.971)PLQS(0.029)VVVR 142.23 3.4824e-06 5983400000.0 6621110.0 5448630.0 5001240.0 5981450.0 5967580.0 5869700.0 5837700.0 6331350.0 6819790.0 6242480.0 True False 6253823.829444447 5186869.636239634 5323627.932666923 6549925.209611478 6437194.595114451 5833065.025045333 6427831.686461645 6309388.0245982 5581488.048915574 6187176.483775952 1.0107718513999493 0.8383257936541283 0.8604293002836705 1.0586291221507464 1.040409080296012 0.9427668727958267 1.0388958038156404 1.0197523928956467 0.9021058415824056 1.0 22.560849755471786 -5.254648300147624 24.95822043556551 1.0020625624789103 0.8966906612646426 0.34376654979648114 0.06130847877198852 553.1113853781221 2032761.8712842667 0.016617295056472227 0.02790955489786281 5.563546213417126e-06 5.254648300147624 -0.10537190121426776 S(ph)PALSDANK ddPTM_KYSE-520_SHP099_60min_R1 8 SPALSDANK 9 0 P52701-2;P52701;A0A087WWJ1;P52701-3;F8WAX8;F8W7G9 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 S(1)PALSDANK;S(1)PALSDANK;S(1)PALSDANK;S(1)PALSDANK;S(1)PALSDANK;S(1)PALSDANK;S(1)PALSDANK;S(1)PALSDANK 149.94 0.00027847 6218530000.0 9385040.0 8266560.0 8059660.0 7604270.0 8053690.0 8214860.0 7533400.0 7503880.0 8979580.0 8499030.0 True False 8864433.122586584 7869422.0492404755 8579198.579511939 8326977.53449286 8687469.583772205 8163588.011592402 8294949.590898844 7477850.791698757 7349114.628790808 8423735.206345275 1.0523162119233458 0.9341962747490855 1.018455396490806 0.9885136854990965 1.031308483821793 0.9691173584662403 0.9847115783804052 0.8877119957505288 0.8724294447497594 1.0 23.00602865638858 -7.170209726310058 5.040948118455961 0.9103983676791054 0.9962149115011595 0.38414185476027063 0.04423018264954056 0.20019794683880443 8.294700572685509 0.020381269102081465 0.011450894545104002 6.75756565173872e-08 7.170209726310058 0.08581654382205406 S(ph)PAPPKPR ddPTM_KYSE-520_SHP099_60min_R1 3 SPAPPKPR 8 1 Q9NZ20 Q9NZ20 PLA2G3 Group 3 secretory phospholipase A2 1 S(1)PAPPKPR;S(1)PAPPKPR;S(1)PAPPKPR 59.426 0.039475 868690000.0 1092530.0 911520.0 800250.0 812810.0 899360.0 877160.0 828430.0 974720.0 1061780.0 936070.0 True False 1031925.1829954402 867729.2109805868 851835.3954452705 890059.2180197629 970134.5153415834 871685.3190740192 912175.7890976634 971338.9238213578 868987.5172956311 927777.1480514397 1.1122554431985494 0.9352776286881302 0.9181465583996484 0.9593459160845967 1.0456546783665719 0.9395417001860553 0.9831841525882126 1.046952844076197 0.9366338879123276 1.0 19.82341878624336 -7.025215926174709 24.831083493397962 0.9980897134051906 0.9796590107292646 0.0 0.059900604800057704 4160.961691031077 4097437.538529415 0.027820038350079453 0.01614628915785883 9.435916168426096e-08 7.025215926174709 -0.018430702675925947 S(ph)PAPPLLHVAALGQK ddPTM_KYSE-520_SHP099_60min_R1 4 SPAPPLLHVAALGQK 15 0 Q8N163-2;Q8N163;H0YC69;E5RGU7;E5RFJ3;H0YC58 Q8N163-2 CCAR2 Cell cycle and apoptosis regulator protein 2 1 S(1)PAPPLLHVAALGQK;S(1)PAPPLLHVAALGQK;S(1)PAPPLLHVAALGQK;S(1)PAPPLLHVAALGQK 205.42 4.1011e-12 1833450000.0 3155250.0 2627490.0 2531959.0 2752950.0 2590900.0 3144510.0 2761861.0 3143420.0 3198770.0 2860710.0 True False 2980221.9926650645 2501261.4364571045 2695173.1284176395 3014589.5402954035 2794789.089795531 3124883.9466932425 3041056.8630458307 3132516.2096997453 2617954.002429645 2835366.334998705 1.0510888684394377 0.882165174066739 0.9505555226319179 1.0632098939330816 0.9856888879922485 1.1021094199084047 1.072544604028114 1.1048012283397504 0.9233212548638238 1.0 21.43510371561768 -5.254050933282719 23.92547491148722 1.042507084016403 0.9533593725927904 0.20841904897235541 0.06529304012632052 412.83383827375496 1336841.399143195 0.017301156343827433 0.029161087599129883 5.57120407012131e-06 5.254050933282719 -0.08914771142361266 S(ph)PAPRPPR ddPTM_KYSE-520_SHP099_60min_R1 5 SPAPRPPR 8 1 F8VP90;P50281 F8VP90 MMP14 Matrix metalloproteinase-14 1 S(1)PAPRPPR;S(1)PAPRPPR;S(1)PAPRPPR;S(1)PAPRPPR;S(1)PAPRPPR 63.184 0.020658000000000003 2094850000.0 456847.0 417275.0 406824.0 391680.0 405542.0 438755.0 370894.0 370508.0 496788.0 397363.0 True False 431504.7862080834 397228.48265745566 433048.5259814152 428905.1494371136 437455.84818165895 436016.56729709625 408387.58509661513 369222.7942252175 406583.82220635354 393842.6729637361 1.0956273045806164 1.0085968584060248 1.099546990991728 1.0890266060036768 1.1107375564199937 1.1070831000002972 1.0369307673630843 0.9374880366486199 1.0323508601714944 1.0 18.58725991055642 -6.999883366202228 5.899890672234884 0.9879732352995229 1.0830383908356773 0.6032775924191595 0.03468950386746301 0.10546633071302648 14.358806953543622 0.015617146613860412 0.009803745065847021 1.0002685953093509e-07 6.999883366202228 0.09506515553615447 S(ph)PAQSDSTTQR ddPTM_KYSE-520_SHP099_60min_R1 1 SPAQSDSTTQR 11 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(1)PAQSDSTTQR 72.29 0.039468 0.0 4878.1 3436.4 4876.7 3613.0 3903.3 4678.3 4440.2 2465.2 5351.6 3756.0 True False 4607.502068748735 3271.310185858441 5191.059884995885 3956.378433711938 4210.467503260993 4649.1009943727295 4889.058748175997 2456.6487965820043 4379.884342857566 3722.724762123781 1.2376692780586327 0.8787408134874274 1.394424841130192 1.0627641543542048 1.1310176745000506 1.248843600170016 1.3133011599242788 0.6599061046835244 1.176526502152386 1.0 11.862143239826038 -7.237781587027194 24.995200719784446 0.9386620967574214 1.1736952101436493 0.2677300802674767 0.1780795669916384 968.3927604950183 1023139.4372019423 0.07943775488909373 0.04583009023523185 5.783868533836457e-08 7.237781587027194 0.2350331133862279 S(ph)PART(ph)PPSEEDSAEAER ddPTM_KYSE-520_SHP099_60min_R1 3 SPARTPPSEEDSAEAER 17 1 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 S(1)PART(1)PPSEEDSAEAER;S(1)PART(1)PPSEEDSAEAER;S(1)PART(0.997)PPS(0.003)EEDSAEAER 117.43 0.00010214 935319000.0 1290433.0 1208999.0 1149022.0 1027371.0 1099313.0 1095887.0 995987.0 1041568.0 1518685.0 1043643.0 True False 1218850.1090755912 1150916.8732955034 1223089.7966202027 1125012.0309496454 1185822.6788646397 1089047.1627343565 1096671.0858563946 1037955.0437117994 1242930.0869333725 1034397.134961968 1.178319301049113 1.1126450706360662 1.1824180049233919 1.087601650202762 1.1463901424168572 1.0528327331208218 1.0602031355169175 1.0034395964853113 1.2015985397901083 1.0 19.980358753662816 -6.2597957812306015 24.83404119486814 1.063616545211845 1.1391548484361247 0.3101240049713071 0.05801181668124303 172.64692618420506 2608612.351178925 0.018635537519094532 0.017741516359814795 5.497993458300223e-07 6.2597957812306015 0.07553830322427979 S(ph)PARTPPS(ph)EEDSAEAER ddPTM_KYSE-520_SHP099_60min_R1 2 SPARTPPSEEDSAEAER 17 1 O43765;K7EMD6 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 S(1)PART(0.001)PPS(0.956)EEDS(0.043)AEAER;S(0.927)PART(0.079)PPS(0.579)EEDS(0.415)AEAER 148.69 4.3691e-06 119870000.0 388380.0 360800.0 335980.0 364530.0 344430.0 358920.0 342540.0 372930.0 416080.0 380570.0 True False 366835.7871836643 343466.6264281589 357637.8083870069 399174.82160005916 371534.6814613746 356679.8471453863 377167.28606824134 371636.39287251636 340530.3605232407 377198.4458789794 0.9725273027804576 0.9105727507115895 0.948142316847593 1.058262105693115 0.9849846560093677 0.945602642434597 0.9999173914657431 0.985254305612257 0.9027883445535104 1.0 18.524964206315918 -5.022244280008881 24.977024829288826 0.9827919904260325 0.9385018844022165 0.16420988148113447 0.04002174483027417 1204.2207707946986 1352162.527809909 0.010900164106596054 0.01908037001796787 9.500702520904084e-06 5.022244280008881 -0.044290106023816 S(ph)PASETSSPAQTFDWMK ddPTM_KYSE-520_SHP099_60min_R1 1 SPASETSSPAQTFDWMK 17 0 A0A2R8Y4R9;P49639-3;P49639 A0A2R8Y4R9 HOXA1 Homeobox protein Hox-A1 1 S(0.993)PAS(0.007)ETSSPAQTFDWMK 136.27 0.00012321 0.0 25018.0 35257.0 28937.0 28751.0 27104.0 35893.0 28155.0 36492.0 42765.0 42342.0 True False 23630.201667853442 33563.20079816407 30802.32532083701 31483.486395696647 29236.930599335417 35668.97847316766 31001.18216632027 36365.41776929684 34999.95401792057 41966.882821577536 0.5630678306110414 0.7997544382997953 0.7339674345553204 0.7501983535338778 0.6966667198904529 0.8499315668693943 0.7387058576192563 0.8665265400793439 0.8339898430560854 1.0 15.35696368754657 -13.999913510188167 0.03758054248952309 2.283671063929951 4.3327025047250075e-06 0.6885341204097521 0.061817549618261275 534.186841291607 1.4993070914365254 79.2964006195562 25.58009627058117 1.0001991699831313e-14 13.999913510188167 -2.2836667312274463 S(ph)PAVATSTAAPPPPSS(ph)PLPSK ddPTM_KYSE-520_SHP099_60min_R1 3 SPAVATSTAAPPPPSSPLPSK 21 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 S(1)PAVATSTAAPPPPS(0.262)S(0.738)PLPSK;S(0.912)PAVAT(0.033)S(0.04)T(0.015)AAPPPPS(0.359)S(0.639)PLPS(0.001)K;S(1)PAVATSTAAPPPPS(0.026)S(0.974)PLPSK 302.47 9.920899999999998e-45 1622160000.0 2416210.0 2026780.0 1842600.0 2149630.0 1980120.0 2127670.0 2173090.0 2369400.0 2313640.0 2303420.0 True False 2282178.0147047807 1929410.4465411997 1961376.9442642373 2353930.188890174 2135944.1786583574 2114390.422310888 2392767.1445146115 2361181.1044221167 1893541.2981181263 2283013.4908336434 0.9996340467841223 0.8451156571294174 0.8591175444819819 1.0310627590862966 0.9355810586464894 0.9261401348700823 1.0480740276488212 1.0342387874194867 0.8294043402374722 1.0 21.122507954117314 -5.251647693080299 24.97510377576378 0.9732307229918682 0.8956717415831295 0.16581867901046154 0.07239197760390698 1149.4362402476545 2931797.5884739226 0.019531046686010564 0.03327417863421602 5.602118704181707e-06 5.251647693080299 -0.07755898140873874 S(ph)PAVKPAAAPK ddPTM_KYSE-520_SHP099_60min_R1 5 SPAVKPAAAPK 11 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 S(1)PAVKPAAAPK;S(1)PAVKPAAAPK;S(1)PAVKPAAAPK;S(1)PAVKPAAAPK;S(1)PAVKPAAAPK 109.6 0.00048686 13995900000.0 15567830.0 12833950.0 12989620.0 12810740.0 13054160.0 12879740.0 13584630.0 14086050.0 14224410.0 13787870.0 True False 14704251.436200274 12217387.7778483 13826951.689326838 14028268.87791058 14081448.123989847 12799352.76516302 14957896.973612487 14037188.780258793 11641615.712195715 13665720.198600542 1.075995353520123 0.8940171173049072 1.0117982432234203 1.026529789432332 1.0304212232760246 0.9366028704783342 1.0945560684861873 1.0271825104172916 0.8518845361247694 1.0 23.704058157703834 -7.732968385664759 24.995568038772447 0.9259420580745022 1.0095078448107562 0.21849448760206724 0.06505451776256925 273.59708293857364 240200.40980755884 0.04224317364474323 0.01596009076005551 1.84940324082678e-08 7.732968385664759 0.08356578673625392 S(ph)PDDELLYLPVR ddPTM_KYSE-520_SHP099_60min_R1 7 SPDDELLYLPVR 12 0 Q9H3D4-10;Q9H3D4-12;Q9H3D4-2;Q9H3D4-9;Q9H3D4-11;Q9H3D4;Q9H3D4-8;Q9H3D4-4;Q9H3D4-7;Q9H3D4-3;Q9H3D4-6;Q9H3D4-5 Q9H3D4-10 TP63 Tumor protein 63 1 S(1)PDDELLYLPVR;S(1)PDDELLYLPVR;S(1)PDDELLYLPVR;S(1)PDDELLYLPVR;S(1)PDDELLYLPVR;S(1)PDDELLYLPVR;S(1)PDDELLYLPVR 208.27 1.4408e-10 1321673000.0 445055.0 411982.0 331309.0 344402.0 358683.0 382090.0 335488.0 354620.0 442454.0 382832.0 True False 420366.9119548535 392189.7663224111 352665.70825314283 377133.862531763 386909.31147289765 379705.2345809107 369402.4010873543 353389.90598893043 362115.50695767644 379440.4063187894 1.1078601671158854 1.0336004278703788 0.9294363551699562 0.993921196191508 1.0196840005168906 1.0006979442824515 0.9735452390829414 0.9313449493094511 0.9543409213341466 1.0 18.533513792858805 -4.461159711542938 3.5916322487405146 0.9759622009794874 1.1032013539790047 0.6709775252507644 0.028883872033637042 0.1536222172868936 3.6668612799172933 0.00807324205728167 0.038255560455671925 3.458121822107715e-05 4.461159711542938 0.12723915299951727 S(ph)PDEEDYDYESYEK ddPTM_KYSE-520_SHP099_60min_R1 2 SPDEEDYDYESYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(1)PDEEDYDYESYEK;S(1)PDEEDYDYESYEK 292.16 2.0698e-24 0.0 686020.0 598910.0 539300.0 689080.0 638430.0 668090.0 650500.0 731610.0 705110.0 630620.0 True False 647965.103053034 570137.4646177619 574064.1409105087 754569.9560205434 688670.8088301985 663920.2024945983 716258.8882682049 729072.2156690577 577079.798376616 625033.1974149355 1.0366891002477026 0.912171492611567 0.9184538409876006 1.2072478056227363 1.1018147702849397 1.0622159034759995 1.1459533529268018 1.1664535878804765 0.923278636660182 1.0 19.25357329216991 -5.240131176271852 24.882989353951583 1.0957220810736972 0.951411465083879 0.3359755073298355 0.0836191518796286 792.4231135245725 925363.4477245018 0.022062546077721883 0.038168775553614344 5.752661550991301e-06 5.240131176271852 -0.1443106159898182 S(ph)PDELPSAGGDGGK ddPTM_KYSE-520_SHP099_60min_R1 1 SPDELPSAGGDGGK 14 0 A0A2R8Y5N1;A0A140T8Z0;A0A0G2JH68;O60610-2;O60610-3;O60610;B4E2I7 A0A2R8Y5N1 DIAPH1 Protein diaphanous homolog 1 1 S(1)PDELPSAGGDGGK 171.26 2.2322000000000003e-08 317690000.0 332610.0 278100.0 255370.0 277920.0 253420.0 321620.0 309270.0 314970.0 383770.0 260930.0 True False 314159.460258403 264739.65856338944 271831.5588064466 304333.4332403048 273362.71223744017 319612.6502811182 340534.0297843321 313877.4425845509 314087.0420544222 258618.36320046842 1.2147608405319688 1.0236692216560666 1.0510914826095932 1.1767665276127368 1.0570119958014839 1.2358466983002672 1.3167434267626488 1.2136703623835416 1.2144808209576252 1.0 17.98046519180338 -6.269264403487722 24.706609655847494 1.2170398618422387 1.1011904128771524 0.17762209694357833 0.09300530524355471 699.0232707439715 2207078.0332645066 0.031198948407614464 0.028016407108474774 5.379421774017882e-07 6.269264403487722 -0.11584944896508631 S(ph)PDEVTLTSIVPTR ddPTM_KYSE-520_SHP099_60min_R1 7 SPDEVTLTSIVPTR 14 0 A0A0C4DGG1;Q9UKS6;H0YDM6 A0A0C4DGG1 PACSIN3 Protein kinase C and casein kinase substrate in neurons protein 3 1 S(1)PDEVTLTSIVPTR;S(1)PDEVTLTSIVPTR;S(1)PDEVTLTSIVPTR;S(1)PDEVTLTSIVPTR;S(1)PDEVTLTSIVPTR;S(1)PDEVTLTSIVPTR;S(1)PDEVTLTSIVPTR 210.07 1.0479000000000001e-13 4281720000.0 726883.0 690143.0 694284.0 711179.0 703355.0 692267.0 640080.0 745731.0 830278.0 719856.0 True False 686561.3509846637 656987.4943542379 739038.6575336761 778769.2383362367 758705.0369574801 687946.3048695948 704785.5329788048 743144.2332159245 679520.4448051217 713478.635879494 0.9622731732371358 0.9208229389298808 1.0358245087782827 1.0915102417555362 1.063388584890473 0.964214301976364 0.9878158889929852 1.04157881658203 0.9524047541626631 1.0 19.4445107052981 -4.763593435219152 24.99987711072239 1.0199542585885988 0.9415480444959268 0.3388749862564393 0.042055057326309896 59.56101968939603 691298.5913833358 0.01169236597464219 0.026385209960604564 1.723481256997241e-05 4.763593435219152 -0.07840621409267201 S(ph)PDKPGGS(ph)PSASR ddPTM_KYSE-520_SHP099_60min_R1 3 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 S(1)PDKPGGS(0.833)PS(0.161)AS(0.007)R;S(1)PDKPGGS(0.977)PS(0.012)AS(0.011)R;S(1)PDKPGGS(0.576)PS(0.364)AS(0.06)R 99.069 0.0041757 2016870000.0 3734010.0 2990820.0 2707470.0 3306180.0 3340200.0 3346100.0 3460560.0 3470170.0 3230580.0 3366680.0 True False 3526877.0217356062 2847136.517887657 2881997.8483051695 3620398.3531607348 3603054.7368617263 3325215.748727229 3810387.176610947 3458132.79021377 2643988.108294492 3336853.8344374034 1.0569468117953214 0.8532398058627243 0.8636871709998281 1.084973610709903 1.0797760152623541 0.9965122578669567 1.1419101242273568 1.0363453006316095 0.7923595816537379 1.0 21.670057062272125 -3.920692881872219 20.826547990200105 0.9899941917100656 4.060910253498042 0.03712766602664552 0.10778033632046022 2856.253198383633 760531.4661090901 0.027354063861625883 5737.6880742540925 0.00012003478478166056 3.920692881872219 3.070916061787976 S(ph)PDKPGGS(ph)PSASRR ddPTM_KYSE-520_SHP099_60min_R1 2 SPDKPGGSPSASRR 14 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 S(1)PDKPGGS(0.88)PS(0.106)AS(0.014)RR;S(1)PDKPGGS(0.766)PS(0.135)AS(0.099)RR 84.249 0.0032098 658920000.0 1266110.0 1159970.0 987130.0 1087840.0 1037270.0 1116780.0 950840.0 1007460.0 1242490.0 1003890.0 True False 1195876.3543722879 1104243.300049532 1050761.9792638442 1191227.9865289782 1118897.2477410217 1109809.7617714922 1046960.186504137 1003965.356402931 1016885.1366240181 994996.3156146009 1.2018902337679562 1.1097963708211824 1.0560461006479178 1.1972184899932685 1.1245240109757475 1.1153908254283051 1.0522251892535286 1.009014144723531 1.0219988965445532 1.0 19.924331657927887 -6.85257344743905 1.98016277324168 1.010283162799494 1.1349494553185624 0.6756980147405118 0.0394922881926473 0.211178411968937 1.6820825552925818 0.021641030603200693 0.012785209052846165 1.4041921879478772e-07 6.85257344743905 0.12466629251906847 S(ph)PDKPGGSPS(ph)ASR ddPTM_KYSE-520_SHP099_60min_R1 4 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 S(1)PDKPGGS(0.01)PS(0.495)AS(0.495)R;S(1)PDKPGGS(0.029)PS(0.858)AS(0.113)R;S(0.999)PDKPGGS(0.032)PS(0.944)AS(0.025)R;S(1)PDKPGGS(0.157)PS(0.739)AS(0.104)R 150.45 1.9777e-05 3042770000.0 4839180.0 4027570.0 3445820.0 4213260.0 4236910.0 4310050.0 4666690.0 4819380.0 4244770.0 4518880.0 True False 4570741.038733832 3834079.4916941817 3667943.070706936 4613686.9636371955 4570330.712279743 4283149.379218129 5138444.56770538 4802662.695631749 3474026.7699438487 4478846.238835444 1.0205175161186784 0.8560417766632441 0.8189482011913513 1.0301061294832063 1.020425901798336 0.9563064125933919 1.147269697081952 1.0722990787199924 0.7756521623406164 1.0 22.09469570788275 -5.279335816879048 24.739255623129914 1.0084366393984996 0.8942564201797554 0.16957809029168813 0.10198884567606341 1114.3420266430082 1540415.6672776423 0.028942426066119603 0.04302650048717169 5.25610682364441e-06 5.279335816879048 -0.11418021921874422 S(ph)PDKPGGSPS(ph)ASRR ddPTM_KYSE-520_SHP099_60min_R1 2 SPDKPGGSPSASRR 14 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 2 S(1)PDKPGGS(0.157)PS(0.422)AS(0.422)RR;S(1)PDKPGGS(0.278)PS(0.361)AS(0.361)RR 74.953 0.012602 890410000.0 773880.0 720740.0 653340.0 700600.0 677220.0 663060.0 591500.0 664380.0 794270.0 672970.0 True False 730951.3337084673 686114.5685472041 695455.3417809607 767184.8133569295 730513.36114529 658921.5965903813 651294.5924836951 662075.4208474577 650050.5899173095 667008.0093627379 1.095865901830506 1.028645172046316 1.0426491616575961 1.1501883074686028 1.0952092791857557 0.98787658819857 0.9764419367406766 0.9926049036202836 0.9745768878223372 1.0 19.347344559682544 -6.267750984791367 24.37426114570549 0.9852217286755569 1.0810642294686605 0.70041813133997 0.03145018258917465 225.73357559241347 871738.6419304438 0.011924482863150674 0.01078054631078553 5.398200551210108e-07 6.267750984791367 0.09584250079310364 S(ph)PDKPGGSPSASR ddPTM_KYSE-520_SHP099_60min_R1 9 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 S(0.934)PDKPGGS(0.057)PS(0.001)AS(0.008)R;S(1)PDKPGGSPSASR;S(1)PDKPGGSPSASR;S(1)PDKPGGSPSASR;S(0.999)PDKPGGS(0.001)PSASR;S(1)PDKPGGSPSASR;S(1)PDKPGGSPSASR;S(1)PDKPGGSPSASR;S(0.999)PDKPGGSPS(0.001)AS(0.001)R 160.04 1.7733e-06 27346160000.0 13007520.0 11088380.0 9878320.0 12376900.0 11968000.0 12345640.0 13232800.0 12868990.0 12396180.0 12060990.0 True False 12285966.935751727 10555677.58080229 10515092.313070826 13553196.854749337 12909813.511394866 12268586.281377355 14570500.563682577 12824350.477334855 10145346.194267891 11954139.011908239 1.0277584126730444 0.8830144580289006 0.8796193772379682 1.133766040469178 1.0799450716220234 1.0263044681976574 1.2188665824588474 1.072795829508068 0.8486889925038934 1.0 23.511006888951048 -5.2553958920167 24.950688141801436 1.0641255381977692 0.9254191168936492 0.24908945801745486 0.09769573036823119 627.779124757848 2591795.7814638247 0.027104102786860512 0.04546012625773579 5.553977397153621e-06 5.2553958920167 -0.13870642130412003 S(ph)PDLEASLDTLENNCHVGSDIDFRPK ddPTM_KYSE-520_SHP099_60min_R1 8 SPDLEASLDTLENNCHVGSDIDFRPK 26 1 Q13111;Q13111-2;Q13111-3;K7EJF1 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(0.847)PDLEAS(0.125)LDT(0.027)LENNCHVGSDIDFRPK;S(0.871)PDLEAS(0.107)LDT(0.022)LENNCHVGSDIDFRPK;S(0.755)PDLEAS(0.185)LDT(0.059)LENNCHVGS(0.001)DIDFRPK;S(1)PDLEASLDTLENNCHVGSDIDFRPK;S(1)PDLEASLDTLENNCHVGSDIDFRPK;S(0.738)PDLEAS(0.034)LDT(0.228)LENNCHVGSDIDFRPK;S(1)PDLEASLDTLENNCHVGSDIDFRPK;S(1)PDLEASLDTLENNCHVGSDIDFRPK 390.66 1.0480999999999998e-100 5475150000.0 1188024.0 1267310.0 1316699.0 1701210.0 1117476.0 1057750.0 974943.0 1225541.0 1444718.0 1228236.0 True False 1122121.9404528707 1206426.5253289076 1401575.5243328875 1862892.4869125646 1205415.0036313084 1051148.1898975607 1073499.7529667465 1221289.8843144183 1182393.6295770411 1217354.7845931484 0.9217706741325165 0.9910229463073963 1.1513287186868102 1.5302790201257237 0.9901920285581903 0.8634690586515126 0.8818298219655992 1.0032325003122118 0.9712810468578463 1.0 20.2153182561761 -5.9799872419827915 24.999788126302157 0.9387865731726799 1.152876659179818 0.28290944466726653 0.15489176554547016 328.90773049819086 410867.0347946997 0.05186617151182261 0.058804564119757034 1.0471593093909995e-06 5.9799872419827915 0.2140900860071382 S(ph)PDLLMYQGPPDTAEIIK ddPTM_KYSE-520_SHP099_60min_R1 3 SPDLLMYQGPPDTAEIIK 18 0 P82909 P82909 MRPS36 28S ribosomal protein S36, mitochondrial 1 S(1)PDLLMYQGPPDTAEIIK;S(1)PDLLMYQGPPDTAEIIK;S(1)PDLLMYQGPPDTAEIIK 216.93 2.8377999999999996e-18 227952000.0 233755.0 227789.0 151422.0 171730.0 193248.0 238113.0 202733.0 194113.0 244501.0 224602.0 True False 220788.14417096012 216845.67452174053 161182.9044037662 188051.16756749287 208455.51816928777 236626.8484434671 223227.2301234097 193439.6673093149 200105.78176863326 222612.2010177118 0.9918061236607307 0.9740960896590188 0.7240524268970412 0.8447478022668257 0.9364065276579441 1.0629554326388437 1.0027627825558805 0.8689535722883588 0.898898536799931 1.0 17.764173141085056 -5.952352905936515 7.287108810668172 0.9649963576278571 0.8796979188995654 0.1734680729293654 0.08530950843172314 0.4235700447114079 52.83349649133781 0.029280235728320125 0.033144292804712025 1.1159560578695635e-06 5.952352905936515 -0.08529843872829168 S(ph)PDNSIK ddPTM_KYSE-520_SHP099_60min_R1 6 SPDNSIK 7 0 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 S(1)PDNSIK;S(1)PDNSIK;S(1)PDNSIK;S(1)PDNSIK;S(1)PDNSIK;S(1)PDNSIK 118.21 0.0026215999999999995 2584760000.0 6850730.0 5145160.0 5046860.0 6322420.0 7343930.0 7462050.0 9675100.0 4502590.0 6818240.0 7628900.0 True False 6470706.35030833 4897978.790557391 5372188.670861506 6923300.895895107 7921855.509754188 7415476.578043087 10653153.527876588 4486971.566202409 5580219.489843258 7561313.881194392 0.8557648117745128 0.6477682142966007 0.7104834894134708 0.9156214124523945 1.0476824047017137 0.9807127034477415 1.4089024335270428 0.5934116261674939 0.7379960120054957 1.0 22.850205513451325 -5.3428073652147 4.3677847412368855 0.9652870013031948 0.7288275291291254 0.19218418458317899 0.20461006872985965 0.37766060066106233 13.205256458021346 0.06193105433972752 0.09514440284980437 4.541430107406797e-06 5.3428073652147 -0.23645947217406937 S(ph)PDPFGAVAAQK ddPTM_KYSE-520_SHP099_60min_R1 9 SPDPFGAVAAQK 12 0 Q9Y3Q8;Q9Y3Q8-2 Q9Y3Q8 TSC22D4 TSC22 domain family protein 4 1 S(1)PDPFGAVAAQK;S(1)PDPFGAVAAQK;S(1)PDPFGAVAAQK;S(1)PDPFGAVAAQK;S(1)PDPFGAVAAQK;S(1)PDPFGAVAAQK;S(1)PDPFGAVAAQK;S(1)PDPFGAVAAQK;S(1)PDPFGAVAAQK 153.75 1.2464000000000001e-05 7583020000.0 9054450.0 8040800.0 7559600.0 8769200.0 9717900.0 12858380.0 14192240.0 16602480.0 16832520.0 15142840.0 True False 8552181.608901417 7654507.898513142 8046903.911787655 9602622.131443877 10482643.44271257 12778126.080846107 15626930.122114599 16544889.871927982 13776158.681298437 15008686.218551246 0.5698154711456777 0.5100051921301353 0.5361497865043916 0.6398043100917593 0.6984384435831342 0.851382052684392 1.041192406487863 1.102354305434005 0.9178790522164849 1.0 23.83929436076144 -6.223338733962571 1.3027617226347692 1.0300205737863692 0.5431011043199989 0.9364739003729424 0.0532901633992373 0.09782895049834871 0.3380118406571743 0.025732332481410245 0.023970223825870975 5.979450376675897e-07 6.223338733962571 -0.4869194694663703 S(ph)PDPYR ddPTM_KYSE-520_SHP099_60min_R1 1 SPDPYR 6 0 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-6 P18583-10 SON Protein SON 1 S(1)PDPYR 71.342 0.04293 1116700000.0 1394900.0 1359400.0 1251300.0 1232500.0 1319000.0 1354100.0 1289500.0 1293800.0 1568200.0 1413600.0 True False 1317522.11633579 1294092.3834990014 1331960.8001507896 1349636.4294353642 1422797.795916597 1345648.5596221087 1419855.2443072284 1289312.1097751886 1283454.4111049455 1401076.6037641598 0.9403640834456226 0.9236414197641067 0.9506695041315497 0.9632852520764422 1.0155032152375398 0.9604389624427836 1.0134030077246436 0.9202295622604056 0.9160487068706963 1.0 20.418104406498607 -5.068528011391584 2.933957440073516 0.9698088611509462 0.9323573311301966 0.1800001466480965 0.03246095354902848 0.4791723948315147 8.067068995597035 0.00960216912986307 0.01999090790987624 8.54027762036243e-06 5.068528011391584 -0.037451530020749635 S(ph)PDQPPPCPQFMAQGK ddPTM_KYSE-520_SHP099_60min_R1 3 SPDQPPPCPQFMAQGK 16 0 P49023-3 P49023-3 PXN Paxillin 1 S(1)PDQPPPCPQFMAQGK;S(1)PDQPPPCPQFMAQGK;S(1)PDQPPPCPQFMAQGK 151.9 6.1685e-06 1100220000.0 791640.0 670830.0 621460.0 674640.0 727040.0 873500.0 798660.0 942180.0 891120.0 987070.0 True False 747726.1511047846 638602.3198636413 661520.3059711568 738757.5827620882 784253.9117082646 868048.162491627 879396.3469704607 938911.7974864647 729315.0713071293 978325.3277288404 0.7642919281673035 0.6527504724283708 0.6761762035813392 0.755124662342226 0.8016289566262093 0.887279658298105 0.8988792603498869 0.9597132680456375 0.7454729532559659 1.0 19.89995476645982 -5.904120784947497 1.5774282584156831 0.8986639178621265 0.6944972504890888 0.6336798617029522 0.06744752099137741 0.2366051381959297 1.2139348756991937 0.024896990901470538 0.02990760939539421 1.247036643146995e-06 5.904120784947497 -0.20416666737303768 S(ph)PDREASGSGGR ddPTM_KYSE-520_SHP099_60min_R1 3 SPDREASGSGGR 12 1 A0A494C050;Q8N5F7 A0A494C050 NKAP NF-kappa-B-activating protein 1 S(0.9)PDREAS(0.097)GS(0.003)GGR;S(0.925)PDREAS(0.069)GS(0.006)GGR;S(0.869)PDREAS(0.124)GS(0.007)GGR 103.11 0.0037896 349690000.0 652090.0 553616.0 568426.0 512550.0 508490.0 552737.0 505654.0 451778.0 679090.0 564719.0 True False 615917.267790813 527019.4563654425 605067.6494737568 561262.5978962232 548505.2700876644 549287.1633556205 556770.4410274724 450210.8875637782 555784.3744657934 559716.0290047338 1.100410272126768 0.9415836407304056 1.0810261241752637 1.0027631313225736 0.9799706309340399 0.9813675772915463 0.9947373528278275 0.8043558951926506 0.9929756263262077 1.0 19.094335538294217 -6.280966358272324 1.0530541102999031 0.9308928302681674 1.0307991984231848 0.23119003164551666 0.06660935944131499 0.6896889810539665 1.6019151624458965 0.03584410693613553 0.031840112887112124 5.23640997786268e-07 6.280966358272324 0.09990636815501741 S(ph)PDSCRPQALPCLPSTQDVPSR ddPTM_KYSE-520_SHP099_60min_R1 2 SPDSCRPQALPCLPSTQDVPSR 22 1 Q9Y283-2;Q9Y283 Q9Y283-2 INVS Inversin 1 S(0.778)PDS(0.222)CRPQALPCLPSTQDVPSR;S(0.995)PDS(0.005)CRPQALPCLPSTQDVPSR 136.71 8.8311e-07 2695000000.0 286730.0 249780.0 192288.0 211539.0 206808.0 229490.0 193548.0 210340.0 202967.0 165955.0 True False 270824.5153179157 237780.19387257617 204683.19215167826 231643.60295848065 223082.61302344178 228057.66778500658 213113.72068644848 209610.379633725 166113.3091816972 164484.76781103623 1.6465020981702387 1.4456061618164142 1.2443899509699456 1.4082982031782905 1.3562508917526275 1.3864971864568294 1.2956441105311238 1.2743452322255766 1.009900864331291 1.0 17.327594463133074 -1.0000000000120732 0.07210469742452243 0.5936712715686318 3.0489977019315644 0.7265940643476705 0.0965722293322663 136.31076893852912 0.7255085666161823 4.184352344319904 33.81215266859164 0.09999999999722003 1.0000000000120732 2.4553264303629327 S(ph)PDSTANVR ddPTM_KYSE-520_SHP099_60min_R1 2 SPDSTANVR 9 0 B7ZM87;O75044;E9PDX4;A0A087WW56;A0A286YEY3;A0A075B7B5;P0DMP2 B7ZM87 SRGAP2;SRGAP2B SLIT-ROBO Rho GTPase-activating protein 2;SLIT-ROBO Rho GTPase-activating protein 2B 1 S(0.986)PDS(0.007)T(0.007)ANVR;S(1)PDSTANVR 152.69 9.9854e-05 736870000.0 884240.0 895290.0 887540.0 828990.0 876690.0 914620.0 848270.0 941060.0 1136290.0 953080.0 True False 835189.4445112618 852278.9245423119 944752.2485142086 907776.9603550676 945680.515316241 908911.5173189376 934021.4099174025 937795.6825050563 929968.3795398793 944636.4526850192 0.8841384874967856 0.9022295530940059 1.0001225824271975 0.9609802350680171 1.001105253378963 0.9621812864996501 0.9887628275010512 0.9927583038315757 0.984472255857322 1.0 19.849399683324812 -4.705187022368844 5.698932811449638 0.9848867087893121 0.8901084603688211 0.8740373282644396 0.014155527605367887 0.05592222201828897 3.706909517059909 0.003393475302880961 0.009118985002570992 1.9715735248736576e-05 4.705187022368844 -0.09477824842049098 S(ph)PDVISSASTALSQDIPEIASEALSR ddPTM_KYSE-520_SHP099_60min_R1 4 SPDVISSASTALSQDIPEIASEALSR 26 0 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 S(0.896)PDVIS(0.023)S(0.023)AS(0.027)T(0.032)ALSQDIPEIASEALSR;S(0.962)PDVIS(0.035)S(0.003)ASTALSQDIPEIASEALSR;S(0.887)PDVIS(0.045)S(0.055)AS(0.006)T(0.007)ALSQDIPEIASEALSR;S(0.939)PDVIS(0.024)S(0.028)AS(0.005)T(0.005)ALSQDIPEIASEALSR 197.07 1.1751e-15 1095759000.0 130093.0 190773.0 128514.0 126589.2 133199.4 155567.0 132665.1 153457.0 186334.0 164337.0 True False 122876.48195603394 181607.97872388895 136798.21806967014 138620.19950756922 143681.43497908482 154596.04864835125 146076.1829946045 152924.6934841332 152500.44269788862 162881.10203225113 0.7543937290632027 1.11497267919964 0.8398654992067989 0.8510514588741047 0.8821246491237228 0.9491343484263791 0.8968270792131601 0.9388731508818836 0.9362684853869229 1.0 17.313459702082195 -8.148427187163868 0.6850676180999549 1.0003475551038097 0.900615737859465 0.11588914921740201 0.08736094285390196 2.218702789177467 2.298733437042832 0.08558484268174806 0.033245820278571564 7.105142832443692e-09 8.148427187163868 -0.09973181724434466 S(ph)PEACCELTLQPLR ddPTM_KYSE-520_SHP099_60min_R1 2 SPEACCELTLQPLR 14 0 A0A494C1D8;A0A494C1T3;A0A494C007;H0Y5R6;A0A494C0S8;Q5T446;A0A494BZY8;A0A1B0GVN9;A0A1B0GVZ4;A0A494C0Q8;P06132 A0A494C1D8 UROD Uroporphyrinogen decarboxylase 1 S(1)PEACCELTLQPLR;S(1)PEACCELTLQPLR 176.86 1.1880999999999999e-08 405150000.0 47733.0 51837.0 31933.7 38819.0 39472.0 40146.0 30455.2 44684.0 39597.0 44499.0 True False 45085.155336623575 49346.672711076724 33992.197397726566 42508.34608864207 42578.22183504159 39895.433922597425 33533.90883010891 44529.00163332403 32407.18295913951 44104.77347969812 1.0222284750510449 1.118851063452157 0.7707147031006412 0.9638037503629647 0.9653880629188764 0.9045604540053177 0.7603237968231469 1.0096186448802686 0.7347772225620175 1.0 15.428647187323193 -4.746875955263239 24.999744748612805 0.890401941685351 1.070539829800234 0.3516151304986056 0.0987765166495217 247.46269789873818 424790.28183463175 0.023658143075743696 0.06200126944889635 1.791117366303478e-05 4.746875955263239 0.18013788811488296 S(ph)PEAKPLPGKLPK ddPTM_KYSE-520_SHP099_60min_R1 2 SPEAKPLPGKLPK 13 2 P46087-2;P46087;P46087-4;P46087-3;F5H359;F5GWB7;F5H709;F5H5X6 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 S(1)PEAKPLPGKLPK;S(1)PEAKPLPGKLPK 74.257 0.013382 3367300000.0 3271600.0 2562800.0 2616700.0 2481700.0 2668700.0 2474600.0 2558400.0 2559800.0 2683500.0 2522800.0 True False 3090117.826227089 2439679.241158776 2785376.668868028 2717560.0218496863 2878711.5071740896 2459155.10349374 2817028.0395778297 2550920.6512618135 2196244.045529988 2500449.954708702 1.2358247044328796 0.9756960888437355 1.1139501766963058 1.086828399317545 1.1512773937958916 0.9834850319090778 1.1266084467209456 1.0201846457506851 0.8783395330085088 1.0 21.253756299818132 -7.531749988939282 5.450580504740685 0.9399421079346378 1.0889719908716466 0.4011009090826112 0.07676038170491034 0.15868966794269304 15.722894399007265 0.047285047837287514 0.018496733346526458 2.9393412607115325e-08 7.531749988939282 0.1490298829370088 S(ph)PEAVGPELEAEEK ddPTM_KYSE-520_SHP099_60min_R1 2 SPEAVGPELEAEEK 14 0 Q96N64-3;Q96N64-2;Q96N64 Q96N64-3 PWWP2A PWWP domain-containing protein 2A 1 S(1)PEAVGPELEAEEK;S(1)PEAVGPELEAEEK 130.27 0.0015452999999999999 0.0 840000.0 770300.0 767290.0 648170.0 768890.0 791740.0 648250.0 792770.0 871030.0 754410.0 True False 793403.525501515 733293.6317561277 816750.7411074071 709771.8819205844 829397.2686143378 786798.4569789593 713781.436310322 790020.0659039083 712872.9088794423 747726.5143220994 1.0610878580664311 0.98069764507541 1.0923121294526865 0.9492399538139619 1.1092254356745426 1.0522543228151848 0.9546022812330622 1.0565628619177065 0.953387228117414 1.0 19.512151166236603 -6.734391830022231 24.99200640881168 0.9958516198886717 1.0393603341272943 0.17678504619495605 0.0520520532004103 422.7503823646403 390622.2618371913 0.01883249489637359 0.014583967582239172 1.843351556436291e-07 6.734391830022231 0.04350871423862268 S(ph)PEAVGSECPSR ddPTM_KYSE-520_SHP099_60min_R1 2 SPEAVGSECPSR 12 0 A0A0J9YWL0;Q9Y4K1 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 S(1)PEAVGSECPSR;S(1)PEAVGSECPSR 190.35 3.326e-08 646680000.0 580690.0 701370.0 637320.0 589730.0 692580.0 586470.0 607470.0 659820.0 914910.0 519060.0 True False 548477.9681231845 667675.1324221664 678402.6669480541 645777.7618912095 747082.1057588453 582809.6231899987 668878.9959358756 657531.2384231457 748785.4070042253 514461.5322225692 1.0661204653215917 1.2978135207460235 1.3186654870330707 1.2552498514346249 1.4521632016514667 1.1328536473313233 1.3001535664798771 1.278096023200197 1.4554740444233674 1.0 18.97270368110605 -11.171110933978914 2.5400861206565217 0.2233970935453403 1.2854342557440022 0.35742776236572826 0.1142499990128192 6574277.223610502 1907771.5169938244 30164541.682762403 0.027997084632518557 6.743557516845698e-12 11.171110933978914 1.062037162198662 S(ph)PEDPEKLPIAKPNNAYEFGQIINALSTR ddPTM_KYSE-520_SHP099_60min_R1 1 SPEDPEKLPIAKPNNAYEFGQIINALSTR 29 2 Q07617 Q07617 SPAG1 Sperm-associated antigen 1 1 S(1)PEDPEKLPIAKPNNAYEFGQIINALSTR 61.555 0.021791 106620000.0 63778.0 70129.0 67258.0 85256.0 66970.0 76607.0 64395.0 65507.0 80710.0 63174.0 True False 60240.107201709034 66759.89757422496 71593.55829660496 93358.70460684896 72240.15799282373 76128.8672970762 70904.6750346365 65279.77150644878 66055.09853352903 62614.327508628245 0.962081836515899 1.0662080106989165 1.1434053697492699 1.4910118549781461 1.1537320748652782 1.2158378174162399 1.1324033628703565 1.0425692346125293 1.0549518163303222 1.0 15.934205194224422 -7.16507125618281 2.809638090033904 1.032523241308435 1.1796531533857222 0.19177168492255725 0.12737678092715696 0.5118426035756388 7.772410588707041 0.079190162877652 0.039481559486256514 6.837994447605033e-08 7.16507125618281 0.1471299120772871 S(ph)PEDQLGK ddPTM_KYSE-520_SHP099_60min_R1 6 SPEDQLGK 8 0 Q9UK61;Q9UK61-2;Q9UK61-3 Q9UK61 FAM208A Protein FAM208A 1 S(1)PEDQLGK;S(1)PEDQLGK;S(1)PEDQLGK;S(1)PEDQLGK;S(1)PEDQLGK;S(1)PEDQLGK 136.48 0.0007025 2273670000.0 5557800.0 4898130.0 4637880.0 4562830.0 4933680.0 4778730.0 4772170.0 4744050.0 5609460.0 4689470.0 True False 5249497.754800375 4662816.482556977 4936845.165670376 4996479.991335143 5321932.547200758 4748904.173490116 5254587.515490974 4727593.9978196 4590923.466979178 4647924.944152452 1.1294282540867533 1.0032039111180702 1.062161120282593 1.0749915395301741 1.1450125832811207 1.0217256583423762 1.1305233149476228 1.01714077886894 0.9877361450844881 1.0 22.14815534125652 -7.459851761163486 7.2656354851741956 0.9964900224393541 1.0771986001041074 0.41432935462685927 0.04364256915375657 0.25190434691557123 25.495923928526263 0.023588027370532155 0.011101322922224823 3.4685522322181975e-08 7.459851761163486 0.08070857766475326 S(ph)PEETATQVPSLESLTLK ddPTM_KYSE-520_SHP099_60min_R1 4 SPEETATQVPSLESLTLK 18 0 H0YJG4;Q9HCK8-2;Q9HCK8 H0YJG4 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 S(0.995)PEET(0.005)ATQVPSLESLTLK;S(0.997)PEET(0.003)ATQVPSLESLTLK;S(0.997)PEET(0.003)ATQVPSLESLTLK;S(0.966)PEET(0.034)ATQVPSLESLTLK 152.32 2.5123e-06 277340000.0 312016.0 320894.0 251124.0 247028.0 239617.0 279706.0 255156.0 335590.0 324824.0 367393.0 True False 294707.8504915243 305477.770568286 267311.8548526065 270505.4668483235 258473.4946657671 277960.25110232754 280949.6585625861 334425.9166172946 265844.14974668634 364138.1838474287 0.8093297093364007 0.8389061738614015 0.7340945462742469 0.7428648761582864 0.7098225512490216 0.763337280824114 0.7715468221270143 0.9184038682343093 0.7300639195203795 1.0 18.474126505411377 -9.262554974819853 0.5015616812660971 1.0300120355797164 0.7677628111477858 0.5524592838706812 0.059223555246742575 4.903650141735219 1.270886182138145 0.34414392994145615 0.030339877511692866 5.463173903545173e-10 9.262554974819853 -0.26224922443193066 S(ph)PEGTPQK ddPTM_KYSE-520_SHP099_60min_R1 1 SPEGTPQK 8 0 C9J0I9;Q86WB0;Q86WB0-3;F8WBD7;F8WDK5;F8WF13;F8WAU5 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 S(0.996)PEGT(0.004)PQK 69.27600000000001 0.032464 623990000.0 1124300.0 787630.0 895150.0 926840.0 946370.0 1052500.0 1162800.0 851380.0 1000100.0 956860.0 True False 1061932.8377635165 749791.0725432666 952852.8012906394 1014926.5949353941 1020843.9348912741 1045930.9570949471 1280347.1718343892 848426.7614935858 818507.0504693639 948382.964825816 1.1197299795010083 0.7905994733688372 1.0047131134052418 1.0701653578539339 1.0764047571001727 1.102857174672098 1.3500318113258636 0.8946035440961462 0.8630554120293529 1.0 19.855110223315314 -3.930391057075767 21.829579052657753 1.0254822678818978 4.2387464545027145 0.039428182204089834 0.14685752195762963 3862.8079045017244 1319586.68358392 0.03748621563746882 54088.20089785365 0.00011738401037666834 3.930391057075767 3.2132641866208167 S(ph)PEIHR ddPTM_KYSE-520_SHP099_60min_R1 7 SPEIHR 6 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;Q9Y2W1;A0A3B3ITZ9 Q9NYF8-3;Q9NYF8;Q9NYF8-4;Q9Y2W1 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 1 S(1)PEIHR;S(1)PEIHR;S(1)PEIHR;S(1)PEIHR;S(1)PEIHR;S(1)PEIHR;S(1)PEIHR 105.25 0.01047 24768180000.0 5065150.0 4174950.0 3853460.0 4363190.0 4168890.0 4345460.0 4521630.0 4496630.0 4536610.0 4297990.0 True False 4784176.032373807 3974379.1352722934 4101860.197353998 4777866.265759097 4496957.925260604 4318338.372273458 4978720.487256212 4481032.240051329 3712875.9826315627 4259913.152385622 1.1230689127299671 0.9329718689327211 0.9628976109658217 1.1215877166611747 1.0556454473120498 1.0137151199561703 1.1687375561795306 1.0519069473380875 0.8715849008687631 1.0 22.022392587592243 -7.739430135067044 24.499176561327648 0.9357924978833272 1.0515716671671815 0.286641281861156 0.07440833345690648 213.4557556160785 237606.02535439123 0.051304703918510185 0.01935332631461285 1.822090169076198e-08 7.739430135067044 0.11577916928385434 S(ph)PEIHRR ddPTM_KYSE-520_SHP099_60min_R1 4 SPEIHRR 7 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;Q9NYF8;Q9NYF8-2;Q9NYF8-4;Q9Y2W1;A0A3B3ITZ9 Q9NYF8-3;Q9NYF8;Q9NYF8-4;Q9Y2W1 BCLAF1;THRAP3 Bcl-2-associated transcription factor 1;Thyroid hormone receptor-associated protein 3 1 S(1)PEIHRR;S(1)PEIHRR;S(1)PEIHRR;S(1)PEIHRR 112.8 0.0018755 16406700000.0 2685210.0 2609130.0 2526474.0 2225652.0 2503420.0 2688850.0 2110143.0 2071930.0 2813940.0 2360870.0 True False 2536256.0484665735 2483783.4784160294 2689334.556541328 2437177.2969133253 2700424.9114886452 2672067.8897717367 2323456.8474510927 2064742.9584220974 2302999.4296547994 2339954.5285290647 1.0838911686292072 1.061466557633228 1.1493106057201417 1.0415489990078468 1.154050165746673 1.1419315449054661 0.992949571935339 0.8823859323967419 0.984206915808105 1.0 21.158049064046093 -6.902685277145171 4.945942466940028 0.9477363282023725 1.104142247938211 0.6991412213848912 0.0454509557724295 0.10859778413139673 4.386300416229746 0.01918876081215246 0.012721085337368992 1.2511653914927213e-07 6.902685277145171 0.1564059197358385 S(ph)PEKDVPMVEK ddPTM_KYSE-520_SHP099_60min_R1 5 SPEKDVPMVEK 11 1 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 S(1)PEKDVPMVEK;S(1)PEKDVPMVEK;S(1)PEKDVPMVEK;S(1)PEKDVPMVEK;S(1)PEKDVPMVEK 163.8 1.2037999999999999e-05 4478100000.0 8142070.0 6748760.0 5636640.0 7466640.0 7465220.0 7714920.0 7821240.0 8594340.0 7533520.0 7982480.0 True False 7690413.146285845 6424539.439504716 5999986.8333428735 8176267.220672829 8052690.342708493 7666768.322575729 8611887.267146539 8564528.24047404 6165622.67258471 7911761.437475464 0.9720228810058448 0.8120239077323215 0.7583629613657041 1.0334319715385358 1.0178125827411193 0.9690343146926446 1.0884917771098108 1.0825058753549657 0.779298354899851 1.0 22.91556749464264 -5.2741415411614065 24.689889349661623 1.0028987212172826 0.843925313320425 0.33553903453346057 0.09524605583639278 671.8172056604984 1305847.0181024538 0.02664508114621275 0.03982960479886609 5.319348678182071e-06 5.2741415411614065 -0.15897340789685765 S(ph)PEMDKLK ddPTM_KYSE-520_SHP099_60min_R1 5 SPEMDKLK 8 1 O43149;O43149-3 O43149 ZZEF1 Zinc finger ZZ-type and EF-hand domain-containing protein 1 1 S(1)PEMDKLK;S(1)PEMDKLK;S(1)PEMDKLK;S(1)PEMDKLK;S(1)PEMDKLK 101.97 0.0015609000000000003 919390000.0 3288450.0 3083370.0 2824610.0 2619370.0 2946020.0 2927770.0 2562750.0 2626290.0 3585090.0 2584710.0 True False 3106033.123137449 2935240.276967272 3006688.880135792 2868314.1372576943 3177855.013439131 2909496.7014288628 2821817.7800297346 2617180.012970692 2934128.0287643364 2561811.4802739522 1.212436257333541 1.1457674772592503 1.173657352731617 1.1196429399055412 1.2404718449849794 1.1357185038134539 1.1014931433315218 1.0216130394929837 1.145333312524062 1.0 21.288732883223563 -7.344762893242206 0.5512946428280991 1.0121868401806016 1.182231991092316 0.5521607813332343 0.04778552247407455 0.616538317142961 0.4201329194112837 0.04740551033877667 0.028043884115843867 4.521027063169374e-08 7.344762893242206 0.17004515091171446 S(ph)PENSPPVKPK ddPTM_KYSE-520_SHP099_60min_R1 5 SPENSPPVKPK 11 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.995)PENS(0.005)PPVKPK;S(0.986)PENS(0.014)PPVKPK;S(0.961)PENS(0.039)PPVKPK;S(0.993)PENS(0.007)PPVKPK;S(0.993)PENS(0.007)PPVKPK 139.86 6.3501e-05 2342190000.0 4938980.0 4262080.0 3941040.0 3876030.0 4362480.0 4788540.0 4240460.0 4315840.0 4894510.0 4533780.0 True False 4665004.933787465 4057323.279287497 4195085.744286953 4244406.725829089 4705782.35688418 4758652.9456412755 4669127.079701453 4300869.3583646305 4005790.3645563507 4493614.236427461 1.0381409458717277 0.9029086756929037 0.933566061429909 0.9445418548441091 1.047215472733903 1.0589811886977925 1.0390582800479842 0.957106937106362 0.8914406430537432 1.0 22.099444848029577 -3.925278771818113 19.507444286687814 0.977822820591755 2.7683922229215345 0.0984487958221979 0.05675655965673699 744.6951978248503 210450.39816469446 0.015186219632383023 4772.744351208161 0.00011877395776070917 3.925278771818113 1.7905694023297796 S(ph)PENSTLEEILGQYQR ddPTM_KYSE-520_SHP099_60min_R1 3 SPENSTLEEILGQYQR 16 0 Q86SQ7-2;Q86SQ7-3;Q86SQ7-4;Q86SQ7 Q86SQ7-2 SDCCAG8 Serologically defined colon cancer antigen 8 1 S(0.552)PENS(0.201)T(0.247)LEEILGQYQR;S(1)PENSTLEEILGQYQR;S(0.733)PENS(0.22)T(0.047)LEEILGQYQR 169.28 3.8800999999999995e-06 388520000.0 112327.0 108593.0 85417.0 86809.0 96776.0 102292.0 85061.0 91760.0 118939.0 98606.0 True False 106095.99739167682 103376.02927858385 90923.11649203223 95059.3012599224 104391.72061988214 101653.55768470913 93659.79599536021 91441.70597694501 97342.67580819497 97732.42755430719 1.0855762007213239 1.0577454368575945 0.9303270037113198 0.9726485224886141 1.0681380093815287 1.0401210757629353 0.9583287588279343 0.935633220878847 0.996012052950433 1.0 16.57654970642717 -6.767109670838426 24.981468258367922 0.967129600360248 1.0223876248885524 0.2348855966052602 0.0464583891529925 224.03518386651544 987013.7873975186 0.020730441601008665 0.01440797248648121 1.7095835455332703e-07 6.767109670838426 0.05525802452830442 S(ph)PEPDGPAPAFLR ddPTM_KYSE-520_SHP099_60min_R1 6 SPEPDGPAPAFLR 13 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(1)PEPDGPAPAFLR;S(1)PEPDGPAPAFLR;S(1)PEPDGPAPAFLR;S(1)PEPDGPAPAFLR;S(1)PEPDGPAPAFLR;S(1)PEPDGPAPAFLR 207.12 8.886900000000001e-10 5952230000.0 2536720.0 2276550.0 2114110.0 2082460.0 2237140.0 2191800.0 2058950.0 2461340.0 2542960.0 2204760.0 True False 2396003.084774052 2167181.120828783 2250388.9132956 2280376.3722855723 2413190.190414597 2178120.1631930736 2267088.7594155595 2452802.1860210765 2081222.5668048933 2185227.5416773255 1.0964547348396223 0.9917416285012176 1.0298190327439578 1.04354184120122 1.1043198680180888 0.9967475339072487 1.0374611870740926 1.1224470400635567 0.9524054255729357 1.0 21.05935208070121 -7.7903140471316386 24.99999959915721 0.9762026521402992 1.0490410311982417 0.3354829362492312 0.042867873234128315 286.1198190824045 247718.41070613085 0.04016896590497526 0.010378220352631813 1.6206377575683194e-08 7.7903140471316386 0.07283837905794244 S(ph)PEPEATLTFPFLDK ddPTM_KYSE-520_SHP099_60min_R1 9 SPEPEATLTFPFLDK 15 0 E7EPK0;E9PDJ9;H0Y8P3;G5EA03;Q9UPQ0-9;Q9UPQ0-8;Q9UPQ0-6;Q9UPQ0-5;Q9UPQ0-10;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3 E7EPK0 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(1)PEPEATLTFPFLDK;S(1)PEPEATLTFPFLDK;S(1)PEPEATLTFPFLDK;S(1)PEPEATLTFPFLDK;S(1)PEPEATLTFPFLDK;S(1)PEPEATLTFPFLDK;S(0.919)PEPEAT(0.081)LTFPFLDK;S(0.995)PEPEAT(0.005)LTFPFLDK;S(1)PEPEATLTFPFLDK 251.87 2.8444000000000002e-19 1385071000.0 1153966.0 1029237.0 922566.0 871021.0 932295.0 972037.0 921014.0 1005123.0 1245668.0 1114693.0 True False 1089953.20560581 979790.9096037659 982036.0805177905 953802.5739579861 1005661.3124670687 965970.1565241818 1014119.0833504281 1001636.462910471 1019486.0919348778 1104817.6872380301 0.9865457606228406 0.8868349239168838 0.8888670880829349 0.8633121871377968 0.9102509165843953 0.8743253911322167 0.9179062709302361 0.9066079177411567 0.9227640937605954 1.0 20.075376890598974 -8.471206699649168 1.083278136545423 1.0001311415696044 0.9001984954124056 0.44418830958277455 0.031894530316996086 1.5768868252714796 2.7130485353915526 0.030371521996395253 0.009477346436404951 3.3790397471769346e-09 8.471206699649168 -0.09993264615719877 S(ph)PEPEVLSTQEDLFDQSNK ddPTM_KYSE-520_SHP099_60min_R1 1 SPEPEVLSTQEDLFDQSNK 19 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(1)PEPEVLSTQEDLFDQSNK 244.33 2.1081e-26 232630000.0 238330.0 227800.0 191800.0 155260.0 196330.0 209750.0 176930.0 189540.0 249740.0 200250.0 True False 225109.35980092402 216856.14606522894 204163.7348908503 170015.8637193789 211780.05403510662 208440.87244718784 194815.81107039767 188882.5299789687 204393.51143307582 198475.9407921426 1.1341896599783534 1.0926067169639233 1.0286573479687613 0.8566069168929195 1.0670313650604986 1.0502072524018475 0.9815588241721547 0.9516646159988693 1.029815052732918 1.0 17.59860460924306 -4.767170322809725 3.3140730800186806 0.9913002870690512 1.121621190600032 0.4288879052898853 0.055966943296885015 0.2201632538302252 4.96042108267389 0.015256912943511164 0.04246345211200061 1.7093448080490545e-05 4.767170322809725 0.1303209035309808 S(ph)PEPGQTWTR ddPTM_KYSE-520_SHP099_60min_R1 6 SPEPGQTWTR 10 0 Q09666;E9PJZ0;E9PKR9;E9PJC6;E9PLK4;Q09666-2 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(1)PEPGQTWTR;S(1)PEPGQTWTR;S(1)PEPGQTWTR;S(1)PEPGQTWTR;S(1)PEPGQTWTR;S(1)PEPGQTWTR 142.47 0.00022397 10020590000.0 1778900.0 1772600.0 1653278.0 1808650.0 2121456.0 1700950.0 1920130.0 2045192.0 2372090.0 2003720.0 True False 1680220.8708507686 1687441.6352731544 1759850.9452183298 1980543.5522095503 2288402.517766517 1690333.7401146342 2114235.479062921 2038097.7063033995 1941378.2515227203 1985968.5996705717 0.8460460407729912 0.849681931301967 0.8861423818635653 0.9972683115624681 1.152285347384703 0.8511382004705528 1.0645865596332318 1.0262487063700176 0.9775473045468857 1.0 20.92141138178881 -5.208948185666104 3.539313048659201 1.0133610771229502 0.8527725908516101 0.48781903128166804 0.07077506637738909 0.19904600894631275 5.08106450408311 0.019573483646077847 0.03510289565996383 6.180901381658366e-06 5.208948185666104 -0.16058848627134015 S(ph)PERPTGDLR ddPTM_KYSE-520_SHP099_60min_R1 10 SPERPTGDLR 10 1 Q5T200-2;Q5T200;Q5T9K0 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(1)PERPTGDLR;S(1)PERPTGDLR;S(1)PERPTGDLR;S(1)PERPTGDLR;S(0.989)PERPT(0.011)GDLR;S(0.998)PERPT(0.002)GDLR;S(1)PERPTGDLR;S(1)PERPTGDLR;S(1)PERPTGDLR;S(1)PERPTGDLR 113.76 0.00040871 14321530000.0 11015120.0 9344460.0 9589880.0 8947100.0 9302670.0 9263770.0 8602780.0 9144570.0 11086950.0 9501960.0 True False 10404089.335502667 8895538.115279594 10208059.00915051 9797429.693956288 10034737.204048108 9205951.375209002 9472432.957441902 9112849.621028693 9073839.359265381 9417780.026813019 1.1047284291926083 0.9445472383038711 1.0839135104119566 1.0403120126040726 1.065509830923909 0.9775075812982542 1.0058031649150099 0.9676218381703364 0.9634796452488361 1.0 23.16695559500555 -6.271493784222595 24.678288687691715 0.9822913518162768 1.043655879052809 0.3790038944040348 0.04137655672308648 672.0181401101835 1649447.6560525463 0.013908004232011344 0.012397733219860676 5.351878135151971e-07 6.271493784222595 0.061364527236532185 S(ph)PESCSKPEK ddPTM_KYSE-520_SHP099_60min_R1 9 SPESCSKPEK 10 1 Q03111 Q03111 MLLT1 Protein ENL 1 S(0.984)PES(0.015)CS(0.001)KPEK;S(0.996)PES(0.002)CS(0.002)KPEK;S(0.992)PES(0.004)CS(0.004)KPEK;S(0.999)PES(0.001)CS(0.001)KPEK;S(0.981)PES(0.019)CSKPEK;S(0.997)PES(0.002)CS(0.002)KPEK;S(0.997)PES(0.003)CSKPEK;S(0.966)PES(0.034)CS(0.001)KPEK;S(0.986)PES(0.013)CS(0.001)KPEK 125.54 0.00067896 29925430000.0 41410680.0 35266260.0 33798410.0 33441820.0 35733220.0 36751680.0 33588330.0 35579830.0 41536940.0 34831860.0 True False 39113547.03025605 33572015.93386457 35977109.587968 36620120.5181502 38545221.1197899 36522299.13277651 36983766.18691098 35456411.87412475 33994878.75704728 34523276.81917701 1.1329616025477984 0.9724458112625036 1.04211166791628 1.0607370994924918 1.116499494578069 1.0579036087469278 1.0712704469109726 1.027029156584273 0.9846944406552911 1.0 25.041066070397395 -7.517214164426241 3.3458511142937435 0.9931471334950843 1.061820863539236 0.33668002311321943 0.0408737424261848 0.3015871393967308 6.930877186091446 0.03023672535433847 0.011002747302296261 3.039385838202316e-08 7.517214164426241 0.06867373004415178 S(ph)PESDRPR ddPTM_KYSE-520_SHP099_60min_R1 3 SPESDRPR 8 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 S(1)PESDRPR;S(0.926)PES(0.074)DRPR;S(0.91)PES(0.09)DRPR 103.55 0.0026673 1959970000.0 1133330.0 943741.0 893128.0 965632.0 908608.0 1064440.0 998760.0 1024484.0 1006030.0 1032710.0 True False 1070461.925662657 898402.2657758794 950700.4599353255 1057405.3749521538 980110.2803276622 1057796.4351260301 1099724.4077582685 1020930.3041203625 823360.3119524985 1023560.9928362211 1.0458213366420661 0.8777222579442627 0.9288166182466531 1.0330653301100816 0.9575494642599072 1.033447388606462 1.0744102358873637 0.9974298661884631 0.804407668634402 1.0 19.965165642804756 S(ph)PESRPSVVYPSTK ddPTM_KYSE-520_SHP099_60min_R1 6 SPESRPSVVYPSTK 14 1 J3QS41;P42694 J3QS41 HELZ Probable helicase with zinc finger domain 1 S(1)PESRPSVVYPSTK;S(0.997)PES(0.003)RPS(0.001)VVYPSTK;S(0.991)PES(0.009)RPSVVYPSTK;S(0.998)PES(0.002)RPSVVYPSTK;S(1)PESRPSVVYPSTK;S(0.991)PES(0.008)RPSVVYPSTK 196.8 9.185799999999999e-11 6712940000.0 4677230.0 3815470.0 3443200.0 4286440.0 3720800.0 3945900.0 4282390.0 4383960.0 4272870.0 3949870.0 True False 4417774.728073155 3632169.0940627703 3665154.1813147916 4693821.968834824 4013605.7915439494 3921272.1744427164 4715295.773298818 4368753.06598396 3497024.518287203 3914877.2247523614 1.1284580523090617 0.9277862077252055 0.9362117815959435 1.1989704144889846 1.0252188155907835 1.0016334994236658 1.2044555940313268 1.1159361622790889 0.8932654378473924 1.0 21.900535632902216 -5.196596468697413 24.999943098583838 1.069405796531213 0.9905155097871592 0.07457569872639358 0.10270870785719066 481.75035771602506 185735.65579740022 0.02769513043042738 0.04796936369461093 6.359215335606688e-06 5.196596468697413 -0.07889028674405374 S(ph)PFEGAVTESQSLFSDNFR ddPTM_KYSE-520_SHP099_60min_R1 10 SPFEGAVTESQSLFSDNFR 19 0 O95628-5;O95628-3;O95628-2;O95628;O95628-8;O95628-4;O95628-7;O95628-9;O95628-10;O95628-6 O95628-5 CNOT4 CCR4-NOT transcription complex subunit 4 1 S(1)PFEGAVTESQSLFSDNFR;S(1)PFEGAVTESQSLFSDNFR;S(1)PFEGAVTESQSLFSDNFR;S(0.999)PFEGAVT(0.001)ESQSLFSDNFR;S(1)PFEGAVTESQSLFSDNFR;S(1)PFEGAVTESQSLFSDNFR;S(1)PFEGAVTESQSLFSDNFR;S(0.999)PFEGAVT(0.001)ESQSLFSDNFR;S(1)PFEGAVTESQSLFSDNFR;S(1)PFEGAVTESQSLFSDNFR 226.65 4.4097e-19 2320900000.0 602967.0 567965.0 525308.0 475273.0 516915.0 521175.0 480093.0 568355.0 673682.0 586074.0 True False 569519.2185250855 540679.1088671546 559170.1942025179 520442.80302396236 557593.2696559719 517922.15350495034 528625.4856961532 566383.5091600537 551358.3309412086 580881.8403186718 0.9804390135739951 0.9307901733862742 0.9626229559797516 0.8959529579000911 0.9599082480355665 0.8916136080632479 0.9100396139189845 0.9750408255994639 0.9491746731809234 1.0 19.14788520308733 -8.004508719357332 1.3265312441350212 0.9977644263734079 0.9336839053516467 0.290653993178693 0.029670275030127684 0.5737549769881565 2.275018635914508 0.02779150367505188 0.008481273580013549 9.896719939634448e-09 8.004508719357332 -0.0640805210217612 S(ph)PFEHSVEHK ddPTM_KYSE-520_SHP099_60min_R1 6 SPFEHSVEHK 10 0 O14646-2;O14646 O14646-2 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(1)PFEHSVEHK;S(0.998)PFEHS(0.002)VEHK;S(1)PFEHSVEHK;S(1)PFEHSVEHK;S(1)PFEHSVEHK;S(1)PFEHSVEHK 177.64 1.4604000000000001e-05 5875420000.0 7027950.0 7690740.0 7328970.0 12808800.0 7382490.0 7330150.0 7279460.0 6708160.0 8168640.0 6604810.0 True False 6638095.603629007 7321265.306363914 7801407.132966607 14026144.500893857 7963449.962377802 7284399.814868919 8015338.857483281 6684890.958656317 6685420.890657002 6546296.521864428 1.0140230558542487 1.1183827805402817 1.1917283469989708 2.1426075727011398 1.2164817062258217 1.1127512770830421 1.2244081566901677 1.0211714266729268 1.021252378093156 1.0 22.642247521681576 -5.994880272327848 24.999852730672757 1.0951978261940483 1.379339003321209 0.17804759318069063 0.29263363706739487 277.01853907112337 1352677.4668272068 0.09750742559642808 0.11020622193907281 1.0118583681176367e-06 5.994880272327848 0.2841411771271607 S(ph)PFLKPDER ddPTM_KYSE-520_SHP099_60min_R1 11 SPFLKPDER 9 1 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 S(1)PFLKPDER;S(1)PFLKPDER;S(1)PFLKPDER;S(1)PFLKPDER;S(1)PFLKPDER;S(1)PFLKPDER;S(1)PFLKPDER;S(1)PFLKPDER;S(1)PFLKPDER;S(1)PFLKPDER;S(1)PFLKPDER 142.1 0.00025610000000000005 20647660000.0 14961870.0 12415050.0 12598320.0 12094470.0 12850610.0 12423100.0 11818180.0 12982990.0 14844030.0 12238350.0 True False 14131905.24535161 11818612.362630019 13410427.865224699 13243924.792464994 13861879.89703091 12345562.824785035 13012876.968721827 12937955.03794265 12148728.33954481 12129927.740292232 1.1650444708264311 0.9743349355142397 1.1055653547447775 1.091838721221098 1.142783386168544 1.0177771120413621 1.0727909718288497 1.0666143537662123 1.001549934975303 1.0 23.53206762035565 -7.634443952452099 0.9933662009429104 0.9952560791919677 1.0833373999751152 0.2640839451960104 0.05230505904455087 0.7407852447682647 1.440785297334644 0.047393004871100285 0.016938648298966744 2.3203636190302658e-08 7.634443952452099 0.08808132078314757 S(ph)PFLQK ddPTM_KYSE-520_SHP099_60min_R1 2 SPFLQK 6 0 Q9UJU6;H0Y5J4;Q9UJU6-5;B4DDD6;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;Q9UJU6-4 Q9UJU6;B4DDD6 DBNL Drebrin-like protein 1 S(1)PFLQK;S(1)PFLQK 84.568 0.017747 903770000.0 758560.0 664640.0 630810.0 637790.0 665800.0 705230.0 647760.0 780610.0 910190.0 764530.0 True False 716481.1646481294 632709.6967550204 671473.0219316854 698405.3698414435 718194.6721162016 700828.3979782142 713241.902328382 777902.2461057437 744922.4400227079 757756.8589953403 0.9455291049401576 0.8349771951835426 0.8861325555296815 0.9216747582693121 0.9477903942280489 0.9248723910033573 0.9412543005866318 1.0265855556056764 0.9830626159034064 1.0 19.53137548036265 -6.567139058744014 0.6728235635915629 1.0089758366570296 0.8855312641808458 0.6213319808015383 0.03228519393276396 0.47248530716536785 0.4436109894124225 0.027090350328585804 0.021224047467619068 2.7093239821054875e-07 6.567139058744014 -0.12344457247618379 S(ph)PFNDRFPLK ddPTM_KYSE-520_SHP099_60min_R1 6 SPFNDRFPLK 10 1 E9PQ01;E9PKN0;O94913 E9PQ01 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 S(1)PFNDRFPLK;S(1)PFNDRFPLK;S(1)PFNDRFPLK;S(1)PFNDRFPLK;S(1)PFNDRFPLK;S(1)PFNDRFPLK 133.15 0.00020457 2770090000.0 2423290.0 2012180.0 1916980.0 1868360.0 2052190.0 2163570.0 2135370.0 2083860.0 2356710.0 2165780.0 True False 2288865.2729911515 1915511.852456242 2040551.5980764483 2045928.3726570809 2213685.677636148 2150066.357094457 2351234.0388028864 2076631.57603658 1928790.8718244743 2146592.8741513425 1.066278240533178 0.8923498608060653 0.9506001918892898 0.953104986648174 1.0312554859809318 1.0016181377404823 1.0953330121961058 0.9674082128207838 0.8985359520430829 1.0 21.033617162878116 -3.9225664701727476 16.35181034197727 0.9802516527203192 2.654556703414514 0.177794234828635 0.05733839903643371 7967361.471924974 24649730.66997284 0.015133329358114416 469469458.10969067 0.0001195180585426563 3.9225664701727476 1.674305050694195 S(ph)PFYLDSLEEK ddPTM_KYSE-520_SHP099_60min_R1 2 SPFYLDSLEEK 11 0 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2 A0A0A0MS59 SRCAP Helicase SRCAP 1 S(1)PFYLDSLEEK;S(1)PFYLDSLEEK 115.14 0.00063431 0.0 107074.0 98695.0 94528.0 97571.0 92986.0 102835.0 92573.0 103061.0 113872.0 105620.0 True False 101134.39177327295 93953.54405578476 100621.42613014749 106844.11850420924 100303.46918203222 102193.1686202936 101931.1822654152 102703.50544561824 93195.71527951956 104684.28897111649 0.9660894941090635 0.897494217892692 0.9611893734876492 1.0206318403107144 0.9581520796277941 0.9762034936158355 0.9737008606280844 0.981078502371595 0.8902550344038087 1.0 16.675685413131063 -4.981705692133036 24.320225358901457 0.9719623697197669 0.9311793009159663 0.1637385188115199 0.03532585257338954 283.67518900724673 377107.61927706655 0.008933979043202688 0.018592152987085803 1.0430240148951313e-05 4.981705692133036 -0.04078306880380056 S(ph)PGAFDMSGVR ddPTM_KYSE-520_SHP099_60min_R1 5 SPGAFDMSGVR 11 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 S(1)PGAFDMSGVR;S(1)PGAFDMSGVR;S(1)PGAFDMSGVR;S(1)PGAFDMSGVR;S(1)PGAFDMSGVR 131.17 0.00014251 5855130000.0 1706520.0 1622710.0 1665390.0 1548890.0 1629140.0 1684250.0 1601360.0 1899570.0 2209090.0 1965890.0 True False 1611855.9337367183 1544752.5758626333 1772743.7041182132 1696096.0399092427 1757344.0494613838 1673737.9710091862 1763241.0965675241 1892980.8350329704 1807974.9426271042 1948473.7440392745 0.827240263651317 0.7928013300606715 0.9098114406423743 0.8704741570667298 0.9019079958544013 0.8589994995464766 0.9049344913995326 0.9715198066301551 0.9278928947120889 1.0 20.893913060441314 -1.0000000000000007 0.09924764406455149 1.069834022361257 0.3175260450124171 0.7347981528744412 0.030569561822729876 66.68064896175481 0.4705458076550742 0.41044849914346654 6.830463196440565 0.09999999999999985 1.0000000000000007 -0.7523079773488399 S(ph)PGALETPSAAGSQGNTASQGK ddPTM_KYSE-520_SHP099_60min_R1 6 SPGALETPSAAGSQGNTASQGK 22 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 S(1)PGALETPSAAGSQGNTASQGK;S(0.997)PGALET(0.003)PSAAGSQGNTASQGK;S(1)PGALETPSAAGSQGNTASQGK;S(0.903)PGALET(0.097)PSAAGSQGNTASQGK;S(0.984)PGALET(0.016)PSAAGSQGNTASQGK;S(0.84)PGALET(0.16)PSAAGSQGNTASQGK 392.09 3.4643999999999992e-93 8717590000.0 6241570.0 7161340.0 5303630.0 4758610.0 4571240.0 7091070.0 5189420.0 6803780.0 7333240.0 7354370.0 True False 5895337.669838671 6817298.477009509 5645510.475908034 5210866.863671739 4930970.581202262 7046812.00183114 5714017.2174585555 6780179.275194185 6001708.471936768 7289216.003413273 0.8087752739222023 0.9352581229335525 0.7745017397295467 0.7148734323734789 0.6764747510422615 0.9667448458834772 0.7839001087061888 0.9301657780506539 0.8233681741803766 1.0 22.797332222173786 -6.272736411170059 24.99328796012787 0.8891626573971249 0.7863490659179765 0.3142037372529215 0.08682893032340584 1131.499681603977 2503297.3207199275 0.03160607231556031 0.028119633928204678 5.336586937337687e-07 6.272736411170059 -0.10281359147914837 S(ph)PGAPGPLTLK ddPTM_KYSE-520_SHP099_60min_R1 12 SPGAPGPLTLK 11 0 Q15942;Q15942-2;H0Y2Y8;C9JJK5 Q15942 ZYX Zyxin 1 S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK;S(1)PGAPGPLTLK 165.58 1.6802e-05 181989000000.0 95438500.0 85075240.0 77086250.0 67265260.0 71819650.0 89392140.0 83758900.0 89728890.0 111355300.0 100470190.0 True False 90144336.15306693 80988097.76986128 82055353.01736085 73658130.08636223 77471447.85708977 88834210.49592923 92226067.02008896 89417641.42347029 91135984.55867536 99580102.28122492 0.9052444623775303 0.813295989003327 0.8240135442483049 0.7396872306712815 0.7779812038985667 0.8920879619610337 0.9261495510381443 0.8979468726688515 0.9152027611027908 1.0 26.569354161444583 -6.428442973271575 4.193508471115564 0.9247503915621765 0.8091846039074035 0.6052179180166046 0.046757530508119705 0.17591341480847245 5.441920864676449 0.01786480362093475 0.01536539398610621 3.7286964282927797e-07 6.428442973271575 -0.11556578765477299 S(ph)PGASNFSTLPK ddPTM_KYSE-520_SHP099_60min_R1 7 SPGASNFSTLPK 12 0 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 S(1)PGASNFSTLPK;S(1)PGASNFSTLPK;S(0.962)PGAS(0.038)NFSTLPK;S(1)PGASNFSTLPK;S(0.92)PGAS(0.08)NFSTLPK;S(1)PGASNFSTLPK;S(1)PGASNFSTLPK 233.86 3.5411000000000003e-15 37478900000.0 14776100.0 13418960.0 12638480.0 11253690.0 11788420.0 13510560.0 12223910.0 13534140.0 15799100.0 13468080.0 True False 13956440.277574928 12774293.019330401 13453176.643082978 12323237.314054715 12716101.587065294 13426235.583552238 13459622.116665024 13487193.227232018 12930381.702900253 13348763.289207691 1.045523092679195 0.9569645324116473 1.0078219496153402 0.9231744579677953 0.9526052197918667 1.0058037057565612 1.0083048013554154 1.010370244420788 0.9686576518556071 1.0 23.670202752253658 -6.288598470110669 24.689940994558988 0.9998802680336042 0.974790478553205 0.09341141225533311 0.032801388040883395 1466.7186591921397 1333368.2583760808 0.011610154345736309 0.010241740072713714 5.145191338752075e-07 6.288598470110669 -0.025089789480399194 S(ph)PGASNLK ddPTM_KYSE-520_SHP099_60min_R1 4 SPGASNLK 8 0 Q00653-3;Q00653-4;Q00653 Q00653-3 NFKB2 Nuclear factor NF-kappa-B p100 subunit;Nuclear factor NF-kappa-B p52 subunit 1 S(1)PGASNLK;S(1)PGASNLK;S(1)PGASNLK;S(1)PGASNLK 105.17 0.0018402000000000002 14358700000.0 18532900.0 15286200.0 15349200.0 15617600.0 16440900.0 15232900.0 15442800.0 17074000.0 18066400.0 16955200.0 True False 17504843.092579767 14551828.006946016 16338633.99158835 17101892.008397337 17734705.294075202 15137825.82074264 17003908.931204055 17014774.27910155 14785997.176882016 16804990.11894599 1.0416455450839428 0.8659230326199506 0.972248949624084 1.017667483726552 1.0553237561312845 0.9007934972646141 1.011836889569712 1.0124834444216095 0.8798575347100172 1.0 24.00238635857707 -4.986568848138965 24.989835847110886 0.9847785429046763 0.9451097304145024 0.026262055501603654 0.0643749333664701 704.5329245656783 1310826.8177640236 0.01625444785365531 0.03381107758447538 1.0314095584635853e-05 4.986568848138965 -0.039668812490173844 S(ph)PGCRPLPS(ph)AGSPTPTTHEIVTVGDPLLSSGLR ddPTM_KYSE-520_SHP099_60min_R1 1 SPGCRPLPSAGSPTPTTHEIVTVGDPLLSSGLR 33 1 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 2 S(0.963)PGCRPLPS(0.688)AGS(0.333)PT(0.012)PT(0.002)T(0.002)HEIVTVGDPLLSSGLR 132.59 2.7444e-05 231790000.0 77405.0 80374.0 83752.0 83060.0 74490.0 64823.0 58768.0 82071.0 74944.0 68550.0 True False 73111.19034695794 76512.71239616642 89150.787927938 90953.99742710045 80351.93920987664 64418.415612129094 64708.842960408765 81786.31485651544 61336.0587844976 67942.70033109303 1.0760713070083796 1.1261358766035303 1.3121466690828505 1.3386868196858612 1.1826427094936156 0.9481285744930703 0.9524031668608212 1.2037542584848822 0.9027615694636737 1.0 16.052030937726215 -6.15938842070991 5.5653189724983 1.0117082283318894 1.218848326776451 0.49199800100549174 0.10436221188554283 0.2171571679599564 9.733280481307867 0.03655902281899581 0.036590662908955844 6.928059028276106e-07 6.15938842070991 0.2071400984445615 S(ph)PGDGHNAPVEGPEGEYVELLEVTLPVR ddPTM_KYSE-520_SHP099_60min_R1 3 SPGDGHNAPVEGPEGEYVELLEVTLPVR 28 0 Q8TER5-4;Q8TER5-3;Q8TER5;G3V485;G3V3N2;G3V5C1 Q8TER5-4 ARHGEF40 Rho guanine nucleotide exchange factor 40 1 S(1)PGDGHNAPVEGPEGEYVELLEVTLPVR;S(1)PGDGHNAPVEGPEGEYVELLEVTLPVR;S(1)PGDGHNAPVEGPEGEYVELLEVTLPVR 167.97 2.5388e-10 46720000.0 18543.3 21871.6 20498.5 15569.4 17763.4 17023.0 15224.5 22725.9 25403.4 20164.9 True False 17514.666183847898 20820.8555060591 21819.86610875965 17049.111094889195 19161.27852007951 16916.753142638776 16763.54103680137 22647.06915716493 20790.782927600692 19986.254674054817 0.8763355851051265 1.0417587409755025 1.0917436240360299 0.8530418216386245 0.9587228238892478 0.8464193726401016 0.8387534988515373 1.1331322214443835 1.0402540779483949 1.0 14.286720522996779 -7.269110924952379 24.978299943770498 1.0650198581983221 0.9350774142370072 0.3180164966549416 0.08560580053105313 777.1330548056377 2530303.3076172266 0.048551663708585754 0.024022358253049218 5.381323183576282e-08 7.269110924952379 -0.12994244396131494 S(ph)PGEKPHR ddPTM_KYSE-520_SHP099_60min_R1 1 SPGEKPHR 8 1 Q6P9G9 Q6P9G9 ZNF449 Zinc finger protein 449 1 S(1)PGEKPHR 51.059 0.04356 459030000.0 644200.0 559450.0 342090.0 242970.0 750240.0 724580.0 395050.0 549120.0 492890.0 548210.0 True False 608464.9418191378 532573.1822484306 364141.6687633528 266061.7957484058 809279.6197183214 720057.6274506964 434985.50931645575 547215.2308855711 403393.60074577056 543353.2859009265 1.119833002960957 0.9801600470040012 0.6701747798572242 0.4896663048742817 1.4894169975920293 1.3252107719506636 0.8005574284789911 1.0071076131954209 0.7424149466160112 1.0 19.051531011479852 -4.297386911910156 4.984133512344147 0.9457881048922009 1.1243845663997991 0.03431440257733509 0.2816321444883175 0.7357704067330246 46.44891719861232 0.07561399528464045 0.39053488610568965 5.042118962414216e-05 4.297386911910156 0.17859646150759823 S(ph)PGEPGGAAPER ddPTM_KYSE-520_SHP099_60min_R1 2 SPGEPGGAAPER 12 0 Q96EB6;Q96EB6-2 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 S(1)PGEPGGAAPER;S(1)PGEPGGAAPER 158.86 2.365e-05 2226660000.0 1900590.0 1828640.0 1752230.0 1489790.0 1700140.0 1724400.0 1635740.0 1607520.0 1991190.0 1767850.0 True False 1795160.4839677669 1740789.389555399 1865181.5494671268 1631379.1936783032 1833931.3455266424 1713637.379966296 1801096.5624839892 1601943.8883179866 1629640.0898151132 1752188.2243664875 1.0245249106252932 0.9934945146574024 1.0644869789268745 0.9310524811157983 1.046652020612517 0.9779984570926279 1.0279127193285327 0.9142533125384846 0.930059948556222 1.0 20.740726330435795 -7.2574474594021146 24.98562204591569 0.9416174720496611 1.0081557968212744 0.3177051199764951 0.040833417430156164 354.4582171360025 2218589.4949225644 0.01867687153372914 0.010253021104936876 5.5278027881386836e-08 7.2574474594021146 0.06653832477161337 S(ph)PGETSKPR ddPTM_KYSE-520_SHP099_60min_R1 6 SPGETSKPR 9 1 F2Z2K0;Q9UNZ2;Q9UNZ2-5;Q9UNZ2-4;Q9UNZ2-6 F2Z2K0 NSFL1C NSFL1 cofactor p47 1 S(0.998)PGET(0.001)S(0.001)KPR;S(0.998)PGET(0.001)S(0.001)KPR;S(1)PGETSKPR;S(0.968)PGET(0.032)SKPR;S(1)PGETSKPR;S(0.954)PGET(0.045)SKPR 120.32 0.00049743 22225700000.0 7521220.0 5034610.0 4816260.0 6746180.0 6155330.0 7130400.0 8139970.0 6231140.0 6678190.0 8036250.0 True False 7104002.933419641 4792739.77849632 5126723.825888465 7387334.918887032 6639719.451963081 7085896.528712412 8962837.60605156 6209525.629699005 5465599.039470056 7965055.077107901 0.8918962724861776 0.6017208584371216 0.6436520245318844 0.9274681527462032 0.833606219628798 0.88962304216549 1.1252700099728568 0.7795960692783651 0.686197268764475 1.0 22.925252907119418 -5.2651577948090065 24.838694292334402 0.8897240711641337 0.7013528296787794 0.27673567400699184 0.13241245126902765 376.7059509616057 2516367.143175222 0.03794009092911175 0.05884073325709371 5.4305298495730645e-06 5.2651577948090065 -0.18837124148535422 S(ph)PGETSKPRPFAGGGYR ddPTM_KYSE-520_SHP099_60min_R1 7 SPGETSKPRPFAGGGYR 17 2 F2Z2K0;Q9UNZ2;Q9UNZ2-5;Q9UNZ2-6 F2Z2K0 NSFL1C NSFL1 cofactor p47 1 S(0.978)PGET(0.018)S(0.004)KPRPFAGGGYR;S(0.996)PGET(0.004)S(0.001)KPRPFAGGGYR;S(0.956)PGET(0.022)S(0.022)KPRPFAGGGYR;S(0.992)PGET(0.005)S(0.002)KPRPFAGGGYR;S(0.985)PGET(0.008)S(0.008)KPRPFAGGGYR;S(0.999)PGET(0.001)SKPRPFAGGGYR;S(0.936)PGET(0.052)S(0.012)KPRPFAGGGYR 113.54 0.00010986 66749900000.0 15724620.0 12435080.0 13141330.0 12321320.0 13035610.0 12247970.0 12488030.0 12347010.0 14657270.0 12111350.0 True False 14852343.982347164 11837680.091364382 13988441.158671413 13492334.548260061 14061438.344524898 12171525.876076214 13750441.94382781 12304181.104123805 11995879.247708328 12004052.861487713 1.2372774556831176 0.9861402834490091 1.1653098599349025 1.1239816005431935 1.171390904953263 1.013951372633971 1.1454832882270114 1.0250022426674732 0.9993190954860247 1.0 23.51701824137919 -7.367825091582517 1.180605346630587 0.9885547763347811 1.1210957543175908 0.3400035059724199 0.07046595088205007 0.5656706416949042 1.3855106639504697 0.05918053857006658 0.021758614267031372 4.2872114943778885e-08 7.367825091582517 0.13254097798280973 S(ph)PGEYINIDFGEPGAR ddPTM_KYSE-520_SHP099_60min_R1 10 SPGEYINIDFGEPGAR 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 S(1)PGEYINIDFGEPGAR;S(1)PGEYINIDFGEPGAR;S(1)PGEYINIDFGEPGAR;S(1)PGEYINIDFGEPGAR;S(1)PGEYINIDFGEPGAR;S(1)PGEYINIDFGEPGAR;S(1)PGEYINIDFGEPGAR;S(0.996)PGEY(0.004)INIDFGEPGAR;S(1)PGEYINIDFGEPGAR;S(1)PGEYINIDFGEPGAR 263.07 2.5550999999999997e-29 10098560000.0 3092730.0 2740508.0 2513087.0 2564970.0 2643658.0 2873705.0 2506867.0 3027380.0 3384460.0 2886730.0 True False 2921170.1016955925 2608849.8820936265 2675084.6091013723 2808743.9776136493 2851698.844243578 2855769.141148253 2760285.5810242123 3016878.7253758074 2769927.379293614 2861155.818041957 1.020975538373407 0.9118167789543888 0.9349664188971284 0.9816815847295671 0.9966947015822261 0.9981173073973334 0.9647449340641728 1.0544265734679281 0.9681148303167999 1.0 21.44816663804262 -5.474809712251204 4.193242967960442 0.9977585059417451 0.9517506330698157 0.21781660501808098 0.03445751855759089 0.2955748754973322 10.958475124290548 0.009753796999828146 0.014289221620723751 3.3511223767348437e-06 5.474809712251204 -0.04600787287192942 S(ph)PGFASPK ddPTM_KYSE-520_SHP099_60min_R1 6 SPGFASPK 8 0 P49790-3;P49790 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 S(1)PGFASPK;S(1)PGFASPK;S(1)PGFASPK;S(1)PGFASPK;S(1)PGFASPK;S(1)PGFASPK 139.43 0.0006408 5299200000.0 6077950.0 4865890.0 4810490.0 5400100.0 5704390.0 6629110.0 7187620.0 9608230.0 9281000.0 8291200.0 True False 5740793.997407065 4632125.340550204 5120581.882456141 5913323.880400738 6153293.039460709 6587735.2655465 7914214.774011258 9574901.292707745 7595804.354970673 8217746.418455991 0.698584953231702 0.5636734336492851 0.6231126663821092 0.7195797459897497 0.7487810801318002 0.8016474262032839 0.9630638828471222 1.16514927635194 0.9243171994102279 1.0 22.970311382127083 -6.473455302572899 1.1813472977233683 1.044737777256475 0.6382007953700952 0.837922059406871 0.07174379019435187 0.17150913481781174 0.4902295463177209 0.04084341311295131 0.03036734778682494 3.361589646227788e-07 6.473455302572899 -0.40653698188637977 S(ph)PGFGIK ddPTM_KYSE-520_SHP099_60min_R1 2 SPGFGIK 7 0 F8VU11;Q6NWY9-2;Q6NWY9-3;Q6NWY9 F8VU11 PRPF40B Pre-mRNA-processing factor 40 homolog B 1 S(1)PGFGIK;S(1)PGFGIK 78.516 0.017125 500080000.0 2003990.0 1590040.0 1374630.0 1646720.0 1685110.0 1753390.0 1750620.0 1907680.0 1861960.0 1687030.0 True False 1892824.6798449778 1513652.091701303 1463240.8492857649 1803223.7736955786 1817718.570035645 1742446.4426230032 1927589.7540047448 1901062.7033358598 1523875.0001919186 1672084.2266894777 1.1320151518877366 0.9052487114827636 0.8750999656176428 1.0784287925888405 1.0870974924717194 1.0420805452323618 1.1528066129905052 1.1369419512435277 0.9113625832168782 1.0 20.673216090407273 -5.296263915839796 24.8319918001894 1.0685450384181447 0.9642339904341782 0.1570958269758671 0.0904985138160273 832.1443358184553 593367.264265314 0.025379112611917068 0.037645042385503626 5.055173714606476e-06 5.296263915839796 -0.10431104798396651 S(ph)PGGRPIHK ddPTM_KYSE-520_SHP099_60min_R1 6 SPGGRPIHK 9 1 Q6P444;H0YEA6 Q6P444 MTFR2 Mitochondrial fission regulator 2 1 S(1)PGGRPIHK;S(1)PGGRPIHK;S(1)PGGRPIHK;S(1)PGGRPIHK;S(1)PGGRPIHK;S(1)PGGRPIHK 98.156 0.0018467 12544300000.0 7497160.0 6731370.0 6356820.0 6795930.0 7328090.0 6769630.0 7361470.0 7433480.0 8616310.0 7694410.0 True False 7081277.589582065 6407984.881207639 6766590.788471619 7441813.143929139 7904768.9918714585 6727378.228103261 8105639.228623747 7407694.992867278 7051805.303499342 7626243.513560391 0.9285407129985673 0.8402544279911153 0.887277042286913 0.9758163544996548 1.0365219754412267 0.8821352499616834 1.0628613175295192 0.9713425724861123 0.9246761254030732 1.0 22.862541167815028 -5.255188691867951 5.542650299863327 0.9799716628630509 0.8800085905797613 0.40414715166000625 0.05208139982790579 0.15553161095468374 18.038759951625284 0.014010615305856533 0.023053377066979047 5.556627809608522e-06 5.255188691867951 -0.0999630722832896 S(ph)PGHMVILDQTK ddPTM_KYSE-520_SHP099_60min_R1 24 SPGHMVILDQTK 12 0 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 1 S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK;S(1)PGHMVILDQTK 253.06 2.1684999999999998e-17 86489460000.0 43757980.0 37709760.0 36169780.0 33512800.0 33720030.0 34005700.0 35333810.0 37725940.0 39636270.0 37227270.0 True False 41330637.62002946 35898126.52609629 38501341.892494224 36697846.436009295 36373604.520274065 33793457.812526084 38905696.33955416 37595077.519440606 32439322.51705567 36897465.35017778 1.1201484228734513 0.9729157866374506 1.0434684747880307 0.9945899017107547 0.9858022543030537 0.9158747759990311 1.0544273426458195 1.0189067775426333 0.8791748216086982 1.0 25.1370183788082 -1.441777378103096 1.234580093810255 0.9843077291275428 190.23823128221392 0.37194877043240426 0.051520551625843236 2521.062565084576 3.586322045519193 0.015446230463244833 1351547.153993245 0.03615951709444964 1.441777378103096 189.25392355308637 S(ph)PGKAEAESDALPDDTVIESEALPSDIAAEAR ddPTM_KYSE-520_SHP099_60min_R1 9 SPGKAEAESDALPDDTVIESEALPSDIAAEAR 32 1 G3V529;Q9GZR7-2;Q9GZR7;A0A1W2PRR2;F5GYL3 G3V529 DDX24 ATP-dependent RNA helicase DDX24 1 S(0.997)PGKAEAES(0.003)DALPDDTVIESEALPSDIAAEAR;S(0.951)PGKAEAES(0.049)DALPDDTVIESEALPSDIAAEAR;S(0.999)PGKAEAES(0.001)DALPDDTVIESEALPSDIAAEAR;S(0.5)PGKAEAES(0.5)DALPDDTVIESEALPSDIAAEAR;S(0.998)PGKAEAES(0.002)DALPDDTVIESEALPSDIAAEAR;S(1)PGKAEAESDALPDDTVIESEALPSDIAAEAR;S(0.993)PGKAEAES(0.007)DALPDDTVIESEALPSDIAAEAR;S(0.923)PGKAEAES(0.077)DALPDDTVIESEALPSDIAAEAR;S(1)PGKAEAESDALPDDTVIESEALPSDIAAEAR 324.47 7.535899999999999e-68 5736680000.0 2222903.0 2334289.0 1844942.0 1591155.0 1532784.0 2100360.0 1570163.0 1885413.0 2544493.0 2198582.0 True False 2099594.1393427304 2222146.252600777 1963869.9133315738 1742377.8928018033 1653405.3804520252 2087250.8741510152 1728890.399354142 1878872.9423617017 2082477.2126486767 2179104.273950911 0.9635124690641712 1.0197521427333198 0.9012280581557035 0.7995844501937102 0.758754594819941 0.9578480934125482 0.7933949834440501 0.8622225952295238 0.9556574403265976 1.0 21.05530380291086 -4.9034864599323775 4.959222315362564 0.8637895449292753 0.9900291998393342 0.25691073821178534 0.0759518448386215 0.23788161515241277 9.620257155780823 0.019662596889126596 0.04279187438668009 1.248859379869485e-05 4.9034864599323775 0.12623965491005895 S(ph)PGKCDQEKPAPSFACLK ddPTM_KYSE-520_SHP099_60min_R1 1 SPGKCDQEKPAPSFACLK 18 2 Q01850;H3BUE0;H3BTR1;H3BU23 Q01850 CDR2 Cerebellar degeneration-related protein 2 1 S(1)PGKCDQEKPAPSFACLK 105.06 0.00030039 849800000.0 280090.0 306060.0 341400.0 260580.0 237850.0 282020.0 247150.0 211810.0 317720.0 241020.0 True False 264552.8493544279 291356.41819457384 363407.1902593136 285345.44485376624 256567.44181862188 280259.80856999266 272134.3339515559 211075.28054682573 260030.0570694192 238884.75031072253 1.107449717951097 1.2196526476286171 1.5212657559204683 1.1944899977190309 1.0740218514781672 1.1732009188759547 1.1391867149225092 0.8835862493201243 1.0885167710839327 1.0 17.86595523382625 -6.433733422831911 0.902260773151455 0.9957276588148177 1.2699342535919314 0.4061201946635631 0.12165099142941768 0.5941509098190949 1.0141598141660717 0.08572052002912649 0.0668061380035616 3.683550066867396e-07 6.433733422831911 0.2742065947771136 S(ph)PGLCSDSLEK ddPTM_KYSE-520_SHP099_60min_R1 7 SPGLCSDSLEK 11 0 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(1)PGLCSDSLEK;S(1)PGLCSDSLEK;S(1)PGLCSDSLEK;S(1)PGLCSDSLEK;S(1)PGLCSDSLEK;S(1)PGLCSDSLEK;S(1)PGLCSDSLEK 204.32 1.6007e-07 7044350000.0 6728430.0 5915810.0 5782650.0 5928530.0 6030480.0 5975930.0 6012220.0 6468390.0 6679490.0 6119990.0 True False 6355190.575107328 5631605.607788152 6155408.871567137 6491975.7087224675 6505044.467262401 5938632.00421132 6619993.87121272 6445952.664823572 5466662.992240393 6065771.649880166 1.047713455423743 0.9284236092038527 1.0147775463470903 1.070263782325324 1.0724182911486477 0.9790398232892005 1.0913687908682654 1.0626764469366263 0.9012312542870602 1.0 22.5322597570676 -4.989452151319792 24.941909220520696 1.0315976901175896 0.9839515352808765 0.0492987903611507 0.05966987998792642 495.60810771270394 1171918.4149269771 0.015205519270012782 0.03160592252473668 1.0245846583807332e-05 4.989452151319792 -0.047646154836713084 S(ph)PGLLDTTPIR ddPTM_KYSE-520_SHP099_60min_R1 5 SPGLLDTTPIR 11 0 Q8IY92-2;Q8IY92 Q8IY92-2 SLX4 Structure-specific endonuclease subunit SLX4 1 S(1)PGLLDTTPIR;S(1)PGLLDTTPIR;S(1)PGLLDTTPIR;S(1)PGLLDTTPIR;S(1)PGLLDTTPIR 160.22 2.1576999999999997e-05 3149650000.0 785880.0 786046.0 688400.0 628524.0 656842.0 671370.0 645700.0 784167.0 850100.0 774559.0 True False 742285.6697870598 748283.1702808993 732775.3654789438 688258.7319873684 708531.7284802492 667179.7307979431 710973.6574247198 781446.9077029529 695743.2692770795 767697.0098577837 0.9668992587642989 0.9747115863060599 0.954511162697756 0.8965239191368854 0.922931468251394 0.8690664705357372 0.9261123181350258 1.0179105788724074 0.9062732566927235 1.0 19.550177503319816 -9.899305476782756 5.0144420341801625 1.0000001897697661 0.9372525753553506 0.17536366053780705 0.04084453655064745 11711345.204823889 23120053.712924227 14.528629813791339 0.010469469311365274 1.2609402944800975e-10 9.899305476782756 -0.06274761441441556 S(ph)PGLLSSDNPQLSALLMGK ddPTM_KYSE-520_SHP099_60min_R1 4 SPGLLSSDNPQLSALLMGK 19 0 H0Y6I7;F5H5V6;F5H6S1;F8W8R6;A0A087X0R0;O15550 H0Y6I7 KDM6A Lysine-specific demethylase 6A 1 S(0.999)PGLLSSDNPQLSALLMGK;S(1)PGLLSSDNPQLSALLMGK;S(1)PGLLSSDNPQLSALLMGK;S(0.999)PGLLS(0.001)SDNPQLSALLMGK 236.96 5.0585999999999996e-26 533941000.0 574451.0 596337.0 416496.0 376512.0 463624.0 550343.0 428962.0 559214.0 649329.0 574502.0 True False 542585.057890322 567688.0753999137 443343.9985771616 412295.58727753913 500108.57114028523 546908.10519763 472325.6652256815 557274.2171555284 531427.221852037 569412.3592357922 0.9528859869120594 0.9969718187392479 0.7785991845561153 0.7240720728838423 0.8782889289784305 0.9604781075205935 0.8294966864779496 0.9786830371989916 0.9332906341640793 1.0 19.119114281908764 -7.499350053070964 1.0597503334013805 0.9923661161032964 0.8693248185925968 0.20136561951794463 0.08199374017916977 0.8925743927712776 1.8343599838184468 0.08269833953461093 0.029867779594540837 3.167013735468894e-08 7.499350053070964 -0.12304129751069959 S(ph)PGLPMSDLK ddPTM_KYSE-520_SHP099_60min_R1 12 SPGLPMSDLK 10 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)PGLPMSDLK;S(1)PGLPMSDLK;S(1)PGLPMSDLK;S(1)PGLPMSDLK;S(1)PGLPMSDLK;S(1)PGLPMSDLK;S(1)PGLPMSDLK;S(1)PGLPMSDLK;S(1)PGLPMSDLK;S(0.999)PGLPMS(0.001)DLK;S(1)PGLPMSDLK;S(0.998)PGLPMS(0.002)DLK 185.18 4.182e-06 31537400000.0 20817890.0 17504720.0 15942030.0 18710660.0 18546720.0 20712040.0 22269860.0 23935670.0 23464050.0 23487590.0 True False 19663080.14226515 16663766.976079622 16969678.761949863 20488915.500834968 20006241.34759835 20582768.475618843 24521114.78168881 23852642.7473974 19203570.000565622 23279508.225668512 0.8446518694318548 0.7158126715797963 0.7289534898009019 0.8801266462426137 0.8593927824273804 0.8841582165779523 1.0533347416098453 1.0246197005612403 0.8249130443138541 1.0 24.472557246174098 -5.915050758458727 1.1626344306889065 0.972003520467989 0.7627109694751175 0.5599020712289953 0.07262106755017111 0.34636527821325597 0.9915692124849184 0.033010692922251235 0.04141561258557636 1.2160438663983814e-06 5.915050758458727 -0.20929255099287147 S(ph)PGLQK ddPTM_KYSE-520_SHP099_60min_R1 2 SPGLQK 6 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(1)PGLQK;S(1)PGLQK 76.592 0.030712 5432500000.0 5852600.0 4468800.0 4501400.0 5339700.0 5340900.0 5259200.0 6722400.0 4973000.0 6203700.0 6536200.0 True False 5527944.611131146 4254112.140194446 4791567.446494646 5847183.48256065 5761198.444435903 5226375.381998812 7401965.796301589 4955749.823706928 5077264.462550542 6478294.353086652 0.8533024759051427 0.6566716342809475 0.7396341051115798 0.9025807047150763 0.8893079150827592 0.8067517616745293 1.1425794187284566 0.7649775625501962 0.7837347588461191 1.0 22.6271825904197 -5.259751355043433 23.166556295815656 0.8947255503460755 0.7405495990124632 0.26276387574402027 0.11368718143675607 72.2442211986385 991452.6551981907 0.031259228641984625 0.050676882068341055 5.4985559047278625e-06 5.259751355043433 -0.15417595133361228 S(ph)PGLVPPS(ph)PEFAPR ddPTM_KYSE-520_SHP099_60min_R1 9 SPGLVPPSPEFAPR 14 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 2 S(1)PGLVPPS(1)PEFAPR;S(1)PGLVPPS(1)PEFAPR;S(1)PGLVPPS(1)PEFAPR;S(1)PGLVPPS(1)PEFAPR;S(1)PGLVPPS(1)PEFAPR;S(1)PGLVPPS(1)PEFAPR;S(1)PGLVPPS(1)PEFAPR;S(1)PGLVPPS(1)PEFAPR;S(1)PGLVPPS(1)PEFAPR 182.18 2.0714e-09 6052801000.0 5200390.0 4552820.0 4045830.0 4336700.0 4628070.0 4567740.0 4282690.0 4886450.0 5459120.0 4482230.0 True False 4911913.999979553 4334095.693277852 4306630.675356875 4748858.6641235985 4992272.778883797 4539231.040342882 4715626.100226531 4869500.045456009 4467881.421216196 4442520.929322171 1.1056591692251185 0.9755937590909982 0.9694114544135576 1.0689558337878597 1.123747723040104 1.0217691964898559 1.0614752693908027 1.0961118974849682 1.0057085812982078 1.0 22.082947142327296 -5.293788182608617 24.77068136942386 1.0598504039975365 1.012758667041122 0.09285968486422402 0.05033648287262098 1056.6296973640963 809098.4819008352 0.013958228463331265 0.02070427735207859 5.084073463794019e-06 5.293788182608617 -0.047091736956414554 S(ph)PGLYFLTAGDQGTLR ddPTM_KYSE-520_SHP099_60min_R1 1 SPGLYFLTAGDQGTLR 16 0 A0A087WYP7;J3KNP2;Q12788 A0A087WYP7 TBL3 Transducin beta-like protein 3 1 S(1)PGLYFLTAGDQGTLR 144.29 1.3080999999999999e-05 85946000.0 38483.0 36765.0 46571.0 38648.0 38939.0 31575.0 36411.0 33769.0 48560.0 41202.0 True False 36348.271276041414 34998.75421460995 49573.04117623463 42321.09430005508 42003.27776739675 31377.92871284844 40091.77921711547 33651.86322074386 39742.72809798254 40836.98233467094 0.8900822048543344 0.8570357605707736 1.2139251811010212 1.036342351479877 1.0285597849314057 0.7683704064050864 0.9817517584563837 0.8240536223993501 0.9732043316099934 1.0 15.317588641170262 S(ph)PGMEPPFSHR ddPTM_KYSE-520_SHP099_60min_R1 1 SPGMEPPFSHR 11 0 G3V470;Q99973-2;Q99973 G3V470 TEP1 Telomerase protein component 1 1 S(1)PGMEPPFSHR 76.58800000000001 0.010129 303250000.0 382200.0 327180.0 304340.0 301640.0 378490.0 319430.0 336560.0 342050.0 402190.0 347730.0 True False 360998.6041031887 311461.7816928079 323958.2433612171 330307.77490862715 408275.0096864841 317436.3188834574 370582.76930906565 340863.50838507037 329162.43438483507 344649.3827298462 1.0474372570867416 0.9037061933081934 0.9399646701678618 0.9583878325629825 1.1846097226482222 0.9210413097773634 1.0752457073150987 0.9890152876097172 0.9550646276446384 1.0 18.39476990587528 -5.581835571974151 24.99999998668736 1.0228739878311415 0.9562741145436552 0.12373121793419506 0.07541815752785885 142.42863355654384 60394.21839856838 0.02155240061972625 0.027824033583240655 2.6191744649097464e-06 5.581835571974151 -0.06659987328748629 S(ph)PGMLEPLGSSR ddPTM_KYSE-520_SHP099_60min_R1 12 SPGMLEPLGSSR 12 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR;S(1)PGMLEPLGSSR 194.86 6.1898e-08 59228010000.0 8955520.0 7791050.0 7327940.0 7043740.0 7178990.0 7919820.0 7188520.0 8146260.0 8657400.0 8169090.0 True False 8458739.453213476 7416756.263395534 7800310.737518557 7713174.931822346 7743935.670134405 7870389.465671934 7915205.754794401 8118002.525411387 7085434.395293952 8096718.218055852 1.0447120951239612 0.9160200545025775 0.9633916517094173 0.9526297845739282 0.9564289458493523 0.9720468532696124 0.9775819710686394 1.0026287573288732 0.8750995408847605 1.0 22.948905839058654 -6.2699852171562656 22.860180061314548 0.9663926250857364 0.9628660604738498 0.0 0.0446922003334847 3958.9645010338163 10590199.962532429 0.01493652754951451 0.013433435521354493 5.370500765754428e-07 6.2699852171562656 -0.0035265646118866067 S(ph)PGNLTER ddPTM_KYSE-520_SHP099_60min_R1 1 SPGNLTER 8 0 Q9H0F6-2;Q9H0F6 Q9H0F6-2 SHARPIN Sharpin 1 S(1)PGNLTER 76.165 0.015717 693840000.0 1076200.0 830450.0 589480.0 421750.0 754060.0 744220.0 700440.0 995240.0 904620.0 735510.0 True False 1016501.0406484869 790553.9354691376 627478.8240013479 461832.99319623905 813400.2319854948 739575.0469256087 771247.3108356375 991787.7447307613 740363.8116144345 728993.9536181204 1.3943888500081794 1.0844451199430183 0.8607462666693795 0.6335210201731903 1.115784606920883 1.0145146516716257 1.0579611902236041 1.3604883000858248 1.0155966423862415 1.0 19.475547323116146 -7.010751587569125 22.967608340470505 1.1546704007435797 1.0032155309562427 0.04520139219561603 0.20371824961361587 453.5397060572415 968849.6564534985 0.0948581729220522 0.05924464276315754 9.755474823072646e-08 7.010751587569125 -0.15145486978733702 S(ph)PGNLTEREELAGSLAR ddPTM_KYSE-520_SHP099_60min_R1 2 SPGNLTEREELAGSLAR 17 1 Q9H0F6-2;Q9H0F6 Q9H0F6-2 SHARPIN Sharpin 1 S(1)PGNLTEREELAGSLAR;S(0.996)PGNLT(0.004)EREELAGSLAR 173.68 1.3069e-08 1335270000.0 36095.0 41530.0 48579.0 43611.0 61288.0 45122.0 32239.5 34801.0 74174.0 40260.6 True False 34092.73839640138 39534.83646219914 51710.480069148165 47755.776327874766 66111.0169189813 44840.37686084393 35498.58328719877 34680.28345361445 60705.871374377115 39903.922406272824 0.8543706067111353 0.9907506349797918 1.29587461459727 1.1967689752816792 1.6567548484554182 1.1237085017435555 0.889601351109746 0.8690945992858781 1.5213008575025262 1.0 15.284242944492004 -9.959427901420437 13.410337324825994 1.0000079800693475 1.1534478968957158 0.030996001251318517 0.2603977011562972 0.0 0.0 0.26312625251556393 0.06381749011733029 1.0979235448521647e-10 9.959427901420437 0.15343991682636826 S(ph)PGNTSQPPAFFSK ddPTM_KYSE-520_SHP099_60min_R1 3 SPGNTSQPPAFFSK 14 0 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9J7T7;A0A384DVL6;Q9Y618-2;H7C184 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 S(1)PGNTSQPPAFFSK;S(1)PGNTSQPPAFFSK;S(1)PGNTSQPPAFFSK 209.31 1.0837000000000001e-13 9182800000.0 9686000.0 8499980.0 8053170.0 6734840.0 7482170.0 8407280.0 7550200.0 8782530.0 10286800.0 8324070.0 True False 9148698.271437705 8091628.202069908 8572290.223727578 7374917.168696512 8070974.211276183 8354807.04699783 8313447.898851048 8752065.45328792 8418976.429125346 8250325.215828471 1.1088894112786827 0.9807647565875224 1.0390245232129043 0.8938941163855619 0.9782613412368039 1.012663965169386 1.0076509327052314 1.0608146011622483 1.0204417654922637 1.0 22.97601955874511 -6.870320269057403 2.6490522492085415 1.030438111672826 0.996296548066003 0.03157031667982246 0.05278177039515507 0.8330431243861363 11.812618225792626 0.02608536433187633 0.01625377149371015 1.3479684609996935e-07 6.870320269057403 -0.03414156360682308 S(ph)PGNVNNTIVVPLLEDGR ddPTM_KYSE-520_SHP099_60min_R1 5 SPGNVNNTIVVPLLEDGR 18 0 Q9Y4X4;Q9Y4X4-2;Q9Y4X4-3 Q9Y4X4 KLF12 Krueppel-like factor 12 1 S(1)PGNVNNTIVVPLLEDGR;S(1)PGNVNNTIVVPLLEDGR;S(0.999)PGNVNNT(0.001)IVVPLLEDGR;S(1)PGNVNNTIVVPLLEDGR;S(1)PGNVNNTIVVPLLEDGR 199.37 8.2801e-13 408723000.0 310774.0 296096.0 231749.0 188536.0 230638.0 287523.0 250326.0 297283.0 337190.0 337623.0 True False 293534.74670738983 281871.10371084284 246687.91135151073 206454.40475458463 248787.8984492885 285728.4623057585 275631.3950263285 296251.7946593739 275964.79586817784 334631.9228867193 0.8771869227992279 0.8423317813771843 0.7371918053228304 0.6169596820697655 0.7434673186679474 0.8538589499797491 0.8236852977103328 0.8853064349143462 0.8246816187994065 1.0 18.352215555179296 -7.998994043372127 0.6057054875264549 0.9956265812517493 0.767693092825554 0.44296005642884706 0.07295693486707924 0.8940412572744126 0.7772953571509682 0.08534364145184162 0.03704039145561002 1.0023189854325428e-08 7.998994043372127 -0.22793348842619532 S(ph)PGPAADGPIDLSK ddPTM_KYSE-520_SHP099_60min_R1 1 SPGPAADGPIDLSK 14 0 Q8IX07 Q8IX07 ZFPM1 Zinc finger protein ZFPM1 1 S(1)PGPAADGPIDLSK 87.083 0.0029436 268360000.0 287040.0 337810.0 297760.0 399340.0 312820.0 333200.0 270330.0 320970.0 409810.0 282090.0 True False 271117.31899994594 321581.1005368526 316954.08603284456 437293.1535340512 337437.15429767186 331120.3752057359 297657.5945665553 319856.6299849612 335398.8344694029 279590.90206269914 0.9696929227659454 1.1501844236145318 1.1336351923274193 1.5640464346582594 1.206896046359908 1.184303111306108 1.0646183132947746 1.1440165886128595 1.1996056809966895 1.0 18.092957890362687 -6.578028603629126 5.579754922241681 1.114283024332047 1.215947197209038 0.09522181200856461 0.14721909662887325 0.5451430070399635 35.883871984633295 0.060327069547524315 0.046686850809541734 2.64223472796104e-07 6.578028603629126 0.10166417287699114 S(ph)PGPIVSR ddPTM_KYSE-520_SHP099_60min_R1 3 SPGPIVSR 8 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 S(1)PGPIVSR;S(1)PGPIVSR;S(1)PGPIVSR 106.88 0.0035426000000000003 3304270000.0 1737260.0 1582810.0 1433380.0 1511170.0 1518010.0 1695800.0 1629380.0 1657710.0 1872090.0 1766410.0 True False 1640890.7246580503 1506769.4317537528 1525777.9682890903 1654791.142450174 1637468.750704589 1685215.8831749277 1794093.6316163705 1651959.7909224234 1532165.6475484355 1750760.981646187 0.9372442851194748 0.8606368588000994 0.8714941584170148 0.9451839284733343 0.9352897213672922 0.9625619378325252 1.0247507514871843 0.9435667165538132 0.8751426743059963 1.0 20.739550706133205 -5.367252480211438 4.367426014358917 0.9564030356363507 0.8870802530538753 0.34251967626064683 0.04163421039242523 0.262144197851127 8.357331938023414 0.01236897566956353 0.018833770872556787 4.292867852553963e-06 5.367252480211438 -0.06932278258247537 S(ph)PGPKPEGLLAQLCK ddPTM_KYSE-520_SHP099_60min_R1 2 SPGPKPEGLLAQLCK 15 1 Q5VT06 Q5VT06 CEP350 Centrosome-associated protein 350 1 S(1)PGPKPEGLLAQLCK;S(1)PGPKPEGLLAQLCK 145.61 5.4464e-06 826840000.0 653210.0 563230.0 596220.0 563180.0 597720.0 552020.0 541220.0 607540.0 685000.0 623680.0 True False 616975.1391581475 536171.5853745344 634653.295185729 616704.4578737592 644757.1634384143 548574.6384185781 595931.7993981836 605432.5855409016 560621.2674447699 618154.6804156977 0.9980918347867931 0.8673744652616215 1.0266901073351677 0.9976539487803227 1.0430353176406055 0.8874391083630907 0.9640496436869658 0.9794192371620631 0.9069271578883173 1.0 19.237608362317516 -6.261803213451057 24.999999846090795 0.9473108983895879 0.9827919719861948 0.11528119254526381 0.053511890882212636 88.503103511605 6081261.1090585925 0.01849567960417455 0.01737064984199053 5.472638817134438e-07 6.261803213451057 0.035481073596606905 S(ph)PGPPALK ddPTM_KYSE-520_SHP099_60min_R1 8 SPGPPALK 8 0 Q8IU81 Q8IU81 IRF2BP1 Interferon regulatory factor 2-binding protein 1 1 S(1)PGPPALK;S(1)PGPPALK;S(1)PGPPALK;S(1)PGPPALK;S(1)PGPPALK;S(1)PGPPALK;S(1)PGPPALK;S(1)PGPPALK 91.867 0.0041064 11374520000.0 12401560.0 10549210.0 9532180.0 9260650.0 10000960.0 10364050.0 9460660.0 9866590.0 11194240.0 9496560.0 True False 11713620.74490304 10042410.11691296 10146639.574827256 10140779.39168405 10787978.65432149 10299364.119600851 10417035.839943854 9832365.102169411 9161648.199826194 9412427.866611883 1.244484516737072 1.0669308980880239 1.0780044977364232 1.0773818971464102 1.1461419739097298 1.0942303373325326 1.1067320767360729 1.0446151876549457 0.9733565377244203 1.0 23.1661354728665 -7.458340075680307 2.385688921337825 0.9863459684692925 1.112587993529543 0.5343409803655724 0.04894799939632797 0.24945577606074065 2.6470758804647208 0.0377792860592638 0.013365335422192063 3.480646551571189e-08 7.458340075680307 0.12624202506025062 S(ph)PGPPPPVGVK ddPTM_KYSE-520_SHP099_60min_R1 6 SPGPPPPVGVK 11 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 S(1)PGPPPPVGVK;S(1)PGPPPPVGVK;S(1)PGPPPPVGVK;S(1)PGPPPPVGVK;S(1)PGPPPPVGVK;S(1)PGPPPPVGVK 121.02 0.00022215 5813300000.0 2733220.0 2601360.0 2380860.0 2027460.0 2251470.0 2886540.0 2695430.0 3389920.0 4098330.0 3166420.0 True False 2581602.838061009 2476386.760879032 2534334.0451106885 2220149.188821925 2428647.8798880517 2868524.0331523567 2967910.3692617514 3378161.1587332785 3354176.5824918584 3138367.982237486 0.822594052919335 0.7890683230567189 0.8075324689311436 0.7074215647710881 0.7738569516492956 0.9140177472455778 0.9456859061969503 1.0764069662490097 1.0687645940424464 1.0 21.581583091491247 -6.680979960001543 1.611131644252134 1.05063323388144 0.777962792181814 0.8900551199656855 0.040722887811756085 0.11695942436646291 0.6205489219195449 0.02267615621283882 0.014751300685746337 2.0845870716505024e-07 6.680979960001543 -0.27267044169962595 S(ph)PGPS(ph)SPKEPLLFSR ddPTM_KYSE-520_SHP099_60min_R1 1 SPGPSSPKEPLLFSR 15 1 B5MC51;P53671-3;P53671-2;P53671 B5MC51 LIMK2 LIM domain kinase 2 2 S(1)PGPS(0.5)S(0.5)PKEPLLFSR 89.01100000000001 0.0015974000000000001 555090000.0 356230.0 318760.0 283310.0 308330.0 281730.0 346520.0 343230.0 374750.0 421080.0 382150.0 True False 336469.2117731007 303446.2911314854 301572.6159120276 337633.5904972055 303900.54817557463 344357.2401449322 377927.0380019922 373450.07971730747 344622.48656298354 378764.44830820133 0.888333668262643 0.8011477647568723 0.7962009561854058 0.8914078182503349 0.8023470775385186 0.9091593513674442 0.9977891000331486 0.9859691990242718 0.9098596452288035 1.0 18.530941396963048 -6.503169329995845 4.04557854096052 0.9714279790405729 0.8354048964055618 0.7315418235107902 0.03925319573397306 0.11257533775416816 4.188817649370329 0.01478290023888367 0.012113608216083163 3.1392844585022534e-07 6.503169329995845 -0.13602308263501106 S(ph)PGPSS(ph)PKEPLLFSR ddPTM_KYSE-520_SHP099_60min_R1 3 SPGPSSPKEPLLFSR 15 1 B5MC51;P53671-3;P53671-2;P53671 B5MC51 LIMK2 LIM domain kinase 2 2 S(1)PGPS(0.142)S(0.858)PKEPLLFSR;S(1)PGPS(0.219)S(0.781)PKEPLLFSR;S(1)PGPS(0.237)S(0.763)PKEPLLFSR 107.02 0.00031585 1619420000.0 931690.0 872920.0 811230.0 818610.0 846060.0 907930.0 912290.0 1089150.0 1117930.0 1018740.0 True False 880007.2984220317 830983.6129203681 863523.183813893 896410.4482759289 912640.1085771013 902263.2720904658 1004513.1762923914 1085371.9928595214 914942.0927219432 1009714.7561677279 0.8715404950225865 0.8229884805034284 0.8552149788236328 0.8877858254524928 0.9038593355225749 0.8935823375652312 0.9948484660211577 1.0749293166507174 0.90613917161567 1.0 19.945516359346936 -6.692900342324453 3.16153319424031 1.0018829776381601 0.8680945447312273 0.6596856332660662 0.04292330551507537 0.14930971274954064 3.0111304846229405 0.018387714454042105 0.013224625066554814 2.0281480658283944e-07 6.692900342324453 -0.13378843290693287 S(ph)PGQMTVPLCIGVSTDK ddPTM_KYSE-520_SHP099_60min_R1 3 SPGQMTVPLCIGVSTDK 17 0 Q8NCD3;C9JWC4;Q8NCD3-3;Q8NCD3-2 Q8NCD3 HJURP Holliday junction recognition protein 1 S(0.998)PGQMT(0.002)VPLCIGVSTDK;S(0.999)PGQMT(0.001)VPLCIGVSTDK;S(1)PGQMTVPLCIGVSTDK 130.77 3.6635e-05 532645000.0 719040.0 709280.0 486140.0 471159.0 520780.0 644270.0 474470.0 643640.0 702250.0 673190.0 True False 679153.4178292959 675205.1241490144 517477.36225150176 515937.8097008812 561762.4231671308 640248.8719501783 522434.05798096175 641407.3630667056 574739.1022818831 667226.0603338947 1.0178760366305724 1.011958561407399 0.7755652739231208 0.7732578812084985 0.8419371732663027 0.9595681434112204 0.7829940840732812 0.9613044231901422 0.8613858727194663 1.0 19.34781611271015 -9.661600111784605 17.059848821886344 0.9999999998102812 0.8842390388984238 0.12090225879866989 0.0908150491435878 0.0 0.0 0.09215620608412121 0.022351163043589455 2.1797158800949938e-10 9.661600111784605 -0.11576096091185739 S(ph)PGRPPK ddPTM_KYSE-520_SHP099_60min_R1 6 SPGRPPK 7 1 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(1)PGRPPK;S(1)PGRPPK;S(1)PGRPPK;S(1)PGRPPK;S(1)PGRPPK;S(1)PGRPPK 68.735 0.019641 2863870000.0 3622850.0 3171750.0 2324680.0 4254680.0 3951800.0 4780300.0 4942490.0 3716630.0 4588690.0 4854050.0 True False 3421883.2885275716 3019374.3691061926 2474532.5924195126 4659043.507983812 4262784.177333738 4750464.3745377455 5442125.123253995 3703737.8779979656 3755499.567461523 4811046.893393759 0.7112554428073226 0.627591964080046 0.514343893803528 0.9684053411288366 0.886040870478136 0.9874076224575566 1.1311727455258844 0.7698403195952458 0.7805992439230535 1.0 22.197919430797295 -5.2690210131271105 24.9656033353935 0.9310358418228787 0.6187165839443053 0.6342130481204538 0.1093438159031442 371.1117891816653 1222035.5517055558 0.032609804958936076 0.049421256015895795 5.382437392249196e-06 5.2690210131271105 -0.3123192578785734 S(ph)PGSISYLPSFFTK ddPTM_KYSE-520_SHP099_60min_R1 3 SPGSISYLPSFFTK 14 0 A0A088AWL3;O75376-2;O75376;E7EVK1;J3QKP0;J3KS29 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 S(1)PGSISYLPSFFTK;S(1)PGSISYLPSFFTK;S(1)PGSISYLPSFFTK 203.32 1.2981e-12 8405260000.0 8531840.0 8400700.0 7743940.0 7749890.0 7661710.0 7847940.0 7334540.0 8604280.0 10448500.0 7313670.0 True False 8058561.82739863 7997117.762292218 8243126.763142092 8486437.215510618 8264642.987833308 7798958.095414477 8075986.881412268 8574433.760934047 8551315.785250623 7248876.573749164 1.111698032848515 1.1032216759287514 1.137159210710453 1.1707244742230973 1.140127425781066 1.0758850721306747 1.114101861060564 1.1828638098191948 1.1796746293374711 1.0 22.78932599382186 -10.04592177017963 4.765170189127972 0.9999961795081923 1.1344250619183656 0.5969284487495059 0.03328904858044636 24553714.563651342 3.8615192950090123 1029.3128690276035 0.008833301652903873 8.996596233593006e-11 10.04592177017963 0.13442888241017326 S(ph)PGSPVCR ddPTM_KYSE-520_SHP099_60min_R1 1 SPGSPVCR 8 0 Q86VQ1;H7C2L5;H7C0Q2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 S(0.999)PGS(0.001)PVCR 64.654 0.029379000000000002 524680000.0 417590.0 500060.0 407580.0 467120.0 452550.0 412000.0 451470.0 572610.0 568400.0 403560.0 True False 394425.4502549734 476036.3669946377 433853.25895105774 511514.94435525057 488163.11034272565 409428.5551763598 497108.9935225926 570623.7495581793 465192.8881979663 399984.7723649291 0.9861011656091657 1.1901362248868874 1.0846744399439998 1.2788360450096488 1.220454237436185 1.0236103558532839 1.2428197968222938 1.4266136837768575 1.1630264958525574 1.0 18.609585551307365 -3.313240431347137 0.9991306397508302 1.2028992871912934 5.662074697970466e-10 0.17438904683939604 0.12079209033568879 18.280942001906723 3.5289004009060556 0.03876872881203231 36.90366766500786 0.00048613799855508284 3.313240431347137 -1.2028992866250858 S(ph)PGTPRPPGASK ddPTM_KYSE-520_SHP099_60min_R1 4 SPGTPRPPGASK 12 1 Q9Y3X0;M0QYB4;A0A2R8Y4Z8 Q9Y3X0;A0A2R8Y4Z8 CCDC9 Coiled-coil domain-containing protein 9 1 S(0.994)PGT(0.006)PRPPGASK;S(0.998)PGT(0.002)PRPPGASK;S(0.999)PGT(0.001)PRPPGASK;S(0.987)PGT(0.013)PRPPGASK 86.539 0.0021243000000000004 11530400000.0 3380400.0 2922180.0 2840070.0 2915240.0 2908660.0 2746580.0 2698580.0 2967380.0 3344150.0 2777660.0 True False 3192882.473339667 2781794.086518394 3023145.4564726674 3192303.5331011377 3137554.993988453 2729437.575427882 2971378.8020027857 2957086.8513716967 2736936.659161207 2753052.093386781 1.1597610088851644 1.0104400469575767 1.0981068842593602 1.1595507185532379 1.1396642299378577 0.9914224224032576 1.0793035152296815 1.0741122038609572 0.9941463387982067 1.0 21.39260047826227 -6.254748889439489 24.996445440809655 1.035648072133608 1.1094814622113833 0.42601440186107364 0.049212725011190846 646.3282788440345 2414758.6554045435 0.01698456390341099 0.01661835624325566 5.562257759632059e-07 6.254748889439489 0.07383339007777523 S(ph)PGVAAAVAEDGGLKK ddPTM_KYSE-520_SHP099_60min_R1 8 SPGVAAAVAEDGGLKK 16 1 E9PLH8;E9PM78;H0YD80;E9PLS2;E9PQV9;E9PM04;Q9BTE7 E9PLH8 DCUN1D5 DCN1-like protein;DCN1-like protein 5 1 S(1)PGVAAAVAEDGGLKK;S(1)PGVAAAVAEDGGLKK;S(1)PGVAAAVAEDGGLKK;S(1)PGVAAAVAEDGGLKK;S(1)PGVAAAVAEDGGLKK;S(1)PGVAAAVAEDGGLKK;S(1)PGVAAAVAEDGGLKK;S(1)PGVAAAVAEDGGLKK 231.13 5.1267e-19 10038590000.0 7512140.0 6323280.0 5973720.0 5738060.0 6173300.0 5969240.0 6113920.0 5984050.0 6867760.0 6548400.0 True False 7095426.619120177 6019500.137363219 6358795.549489951 6283403.4971893495 6659103.5887277685 5931983.758982848 6731974.699709069 5963292.727237772 5620747.906140859 6490386.270578114 1.0932210077056277 0.9274486735328077 0.9797252866621077 0.9681093289736779 1.0259949579448722 0.9139646720062583 1.0372225040327894 0.9187885710701479 0.8660113083901562 1.0 22.62987291104079 -7.297046374964626 23.39691141984716 0.9192998686009654 0.9866270061359931 0.19304332677420333 0.05830685513972782 428.5621259156377 281599.196373143 0.029696216298541817 0.014266885081452041 5.0460741154541245e-08 7.297046374964626 0.06732713753502773 S(ph)PGVFRPEQDPVPR ddPTM_KYSE-520_SHP099_60min_R1 1 SPGVFRPEQDPVPR 14 1 E9PD50;Q92540-2;Q92540;Q92540-5;Q92540-4 E9PD50 SMG7 Protein SMG7 1 S(1)PGVFRPEQDPVPR 47.568000000000005 0.064546 303950000.0 253100.0 204860.0 178060.0 213210.0 212770.0 196580.0 203880.0 199130.0 217610.0 219850.0 True False 239060.03845765893 195018.21809887086 189538.03250607307 233473.4142960761 229513.7885043016 195353.0713023513 224490.18007705116 198439.2645072913 178097.50950168824 217902.30004071156 1.097097361583583 0.8949800808088525 0.8698303435560841 1.0714591551004984 1.0532875901788123 0.8965167933787422 1.030233182647034 0.9106799903911803 0.8173273502317946 1.0 17.733321899159634 -7.414472846268344 6.77564203139255 0.8943827219873689 0.9815423473496837 0.14259580886429413 0.0855995101700079 0.45019928790562813 24.29631507157467 0.04755334085304465 0.022462231291425383 3.8505888926239526e-08 7.414472846268344 0.08715962536231481 S(ph)PGVVISDDEPGYDLDLFCIPNHYAEDLER ddPTM_KYSE-520_SHP099_60min_R1 6 SPGVVISDDEPGYDLDLFCIPNHYAEDLER 30 0 P00492 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase 1 S(1)PGVVISDDEPGYDLDLFCIPNHYAEDLER;S(0.596)PGVVIS(0.404)DDEPGYDLDLFCIPNHYAEDLER;S(0.978)PGVVIS(0.022)DDEPGYDLDLFCIPNHYAEDLER;S(0.974)PGVVIS(0.026)DDEPGYDLDLFCIPNHYAEDLER;S(0.861)PGVVIS(0.139)DDEPGYDLDLFCIPNHYAEDLER;S(0.713)PGVVIS(0.287)DDEPGYDLDLFCIPNHYAEDLER 275.47 8.0553e-42 1097291000.0 204819.0 213054.0 183045.0 166849.0 181026.0 215536.0 164056.0 188681.0 245285.0 173126.0 True False 193457.28177344604 202818.566039426 194844.3735823551 182706.27879501885 195271.7163029549 214190.7598749803 180640.38151226542 188026.5096494765 200747.42713166488 171592.23832998998 1.1274244316424573 1.1819798378606408 1.135508082875222 1.0647700652033887 1.1379985377160637 1.2482543613835775 1.0527304921850538 1.0957751439076264 1.1699097178603521 1.0 17.38862477100339 -13.726080749816706 0.31393905268411193 2.6280863810591686e-13 1.1402308356521553 0.3516695913576027 0.054576783227242937 298.43924350873226 3.1825641788347654 196.3679508467106 0.05219015567737582 1.878967421663384e-14 13.726080749816706 1.1402308356518924 S(ph)PGYEPR ddPTM_KYSE-520_SHP099_60min_R1 5 SPGYEPR 7 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 S(1)PGYEPR;S(1)PGYEPR;S(0.982)PGY(0.018)EPR;S(1)PGYEPR;S(1)PGYEPR 114.89 0.0064771 2572750000.0 3443320.0 3216840.0 3137030.0 2886810.0 3038240.0 3034870.0 3039550.0 3326640.0 3707720.0 3060970.0 True False 3252312.175511755 3062298.177824718 3339247.9732254664 3161171.5544489254 3277332.202779106 3015928.250602131 3346817.3771493095 3315100.662283616 3034491.512015072 3033852.187198627 1.0720074594388358 1.0093761953025 1.1006627110297136 1.0419662394191531 1.0802544094296505 0.9940920204774226 1.103157692148366 1.0927034205132737 1.0002107303774201 1.0 21.53271936684376 -7.7827284002724335 24.497867478819394 1.0001052190757176 1.0604056534934347 0.3293423101687748 0.035159106356784625 253.1130606463957 291253.99930098903 0.032588589251743086 0.008452155137898246 1.649193444134722e-08 7.7827284002724335 0.06030043441771715 S(ph)PGYESESSR ddPTM_KYSE-520_SHP099_60min_R1 2 SPGYESESSR 10 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 S(1)PGYESESSR;S(1)PGYESESSR 102.05 0.0025248000000000002 578110000.0 852930.0 897950.0 796800.0 708720.0 715730.0 796180.0 780960.0 815090.0 961230.0 825540.0 True False 805616.2726261991 854811.134149572 848163.0029250759 776076.5357155622 772053.8790533628 791210.7452920252 859907.0582351085 812262.6430334364 786694.8626364038 818226.3578604008 0.9845885125637163 1.0447122925553725 1.0365872411430954 0.9484863549799872 0.9435700422462856 0.9669827153466195 1.0509403051787523 0.9927114119831594 0.9614636036579786 1.0 19.64214048653689 -5.2434516105233975 24.637727588627477 0.9811111555607144 1.0242376457483877 0.2528111080734392 0.03251245194967208 1027.7647588072045 1407719.5544383128 0.009545097838943183 0.016486464531849605 5.708846811061616e-06 5.2434516105233975 0.04312649018767334 S(ph)PHEAGFCVYLK ddPTM_KYSE-520_SHP099_60min_R1 10 SPHEAGFCVYLK 12 0 Q9NTZ6 Q9NTZ6 RBM12 RNA-binding protein 12 1 S(1)PHEAGFCVYLK;S(1)PHEAGFCVYLK;S(1)PHEAGFCVYLK;S(1)PHEAGFCVYLK;S(1)PHEAGFCVYLK;S(1)PHEAGFCVYLK;S(1)PHEAGFCVYLK;S(1)PHEAGFCVYLK;S(1)PHEAGFCVYLK;S(1)PHEAGFCVYLK 172.76 1.7927e-06 11976742000.0 6195620.0 5845275.0 5387054.0 5527500.0 5530090.0 5486884.0 5344268.0 5654479.0 6142779.0 5591333.0 True False 5851936.607937738 5564459.215063354 5734312.120431149 6052831.938096525 5965276.621092047 5452638.321699721 5884518.764469403 5634864.932114322 5027405.180457101 5541798.139611252 1.0559635086867747 1.0040891196108583 1.0347385408075154 1.0922144375545808 1.0764153566788885 0.9839113919949121 1.0618428560954754 1.016793609250733 0.9071794124947622 1.0 22.401922730831767 -7.579812474260015 6.716369657692578 0.954629792443999 1.0428121763999019 0.48703819616053334 0.03669045859461225 0.17811362724185184 16.216647736988545 0.025126259005170546 0.009328761885804811 2.631403970999637e-08 7.579812474260015 0.08818238395590283 S(ph)PHGQTRPPASLK ddPTM_KYSE-520_SHP099_60min_R1 2 SPHGQTRPPASLK 13 1 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C103 Q9H8V3-2 ECT2 Protein ECT2 1 S(1)PHGQTRPPASLK;S(1)PHGQTRPPASLK 88.992 0.0018893 2249700000.0 2242310.0 1865530.0 2006910.0 1938510.0 1756560.0 1641090.0 1788010.0 1797130.0 2148170.0 1778280.0 True False 2117924.594365837 1775907.1385823837 2136278.629769536 2122745.4075657143 1894791.2785407573 1630847.3485785725 1968759.500095978 1790896.1754832943 1758116.4789588791 1762525.822680907 1.2016417388678864 1.0075921247389856 1.2120552234066726 1.204376911957461 1.0750431308056903 0.9252899036100114 1.117010301217248 1.016096418240973 0.9974982813498181 1.0 20.749212963845977 -5.988575445710929 9.341594420751495 1.0167132531670886 1.148652873489902 0.4873232333378731 0.06992761940999272 0.17420349630536777 118.6000483855989 0.021839876091355244 0.02432330824947488 1.0266550654838297e-06 5.988575445710929 0.13193962032281337 S(ph)PHIPYK ddPTM_KYSE-520_SHP099_60min_R1 7 SPHIPYK 7 0 Q9UPT9-2;Q9UPT9 Q9UPT9-2 USP22 Ubiquitin carboxyl-terminal hydrolase 22 1 S(1)PHIPYK;S(1)PHIPYK;S(1)PHIPYK;S(0.999)PHIPY(0.001)K;S(1)PHIPYK;S(1)PHIPYK;S(0.995)PHIPY(0.005)K 88.948 0.005123 13298090000.0 15773770.0 12484790.0 10535890.0 10844080.0 10600470.0 11265520.0 10833390.0 11440990.0 11358360.0 11593080.0 True False 14898767.533869078 11885001.948348146 11215050.327420032 11874698.102808472 11434666.680576205 11195207.710947545 11928534.784897603 11401303.87603713 9295968.144954719 11490374.330479765 1.2966303016210787 1.0343441916266887 0.976038726403421 1.0334474544758072 0.9951517985140146 0.9743118360600967 1.0381328268179704 0.992248254766917 0.8090222196065372 1.0 23.453922462711663 -4.24301082414725 2.68354364762645 0.9817217703361915 1.367357333009513 0.7135647298832816 0.06038528722043582 0.26972826262145605 2.490592803712369 0.015610245943098297 0.23680090315478675 5.714643935900726e-05 4.24301082414725 0.38563556267332155 S(ph)PHKDLGHR ddPTM_KYSE-520_SHP099_60min_R1 8 SPHKDLGHR 9 1 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 1 S(1)PHKDLGHR;S(1)PHKDLGHR;S(1)PHKDLGHR;S(1)PHKDLGHR;S(1)PHKDLGHR;S(1)PHKDLGHR;S(1)PHKDLGHR;S(1)PHKDLGHR 104.26 0.0011560000000000001 60716000000.0 27671900.0 24833730.0 18924960.0 19733620.0 27560000.0 25733140.0 20356870.0 20466020.0 25083110.0 20207620.0 True False 26136884.54443493 23640680.33461131 20144893.202606615 21609097.311670788 29728815.205050357 25572529.92803636 22414741.08350559 20395028.15342498 20528649.517746847 20028596.20809048 1.3049783555912435 1.180346345245192 1.0058065474638285 1.0789122256577257 1.4843184662658238 1.2768009131716593 1.1191369005907281 1.0182954382587472 1.0249669674529847 1.0 24.25555797130331 -7.045736651227842 3.5536913911726384 1.0183989835529608 1.215202098136946 0.36645234262286286 0.12203334398393917 0.3151216581805331 8.068192131779513 0.0677431714642296 0.038691236794365765 9.000431869395564e-08 7.045736651227842 0.19680311458398525 S(ph)PHLWK ddPTM_KYSE-520_SHP099_60min_R1 2 SPHLWK 6 0 P00519-2;P00519 P00519-2 ABL1 Tyrosine-protein kinase ABL1 1 S(1)PHLWK;S(1)PHLWK 100.19 0.008029699999999999 674450000.0 1401020.0 1233200.0 1112940.0 1291600.0 1298850.0 1250650.0 1087760.0 1114970.0 1153840.0 1146660.0 True False 1323302.6277358716 1173955.220929062 1184681.8931669598 1414353.2756663 1401062.1055544121 1242844.2294449392 1197721.3963145635 1111102.429305954 944331.7419393777 1136501.4844879818 1.164365067531828 1.0329552903821801 1.0423936170225807 1.244479919270406 1.2327851082267796 1.0935702648948735 1.0538669879997231 0.9776515424496162 0.8309111381097926 1.0 20.116168137916407 -7.134908392463863 1.8986623178699307 0.9165668059512435 1.1360373267430877 0.5810815406400283 0.07639504433412184 0.2746914784601763 1.8850176501103508 0.05516034116583832 0.024948621717634872 7.329791271607918e-08 7.134908392463863 0.21947052079184415 S(ph)PHQLLS(ph)PSSFS(ph)PSATPSQK ddPTM_KYSE-520_SHP099_60min_R1 3 SPHQLLSPSSFSPSATPSQK 20 0 E9PIQ6;A0A3B3ITS5;Q14181 E9PIQ6 POLA2 DNA polymerase alpha subunit B 3 S(1)PHQLLS(0.971)PS(0.043)S(0.087)FS(0.859)PS(0.031)AT(0.008)PS(0.001)QK;S(0.99)PHQLLS(0.893)PS(0.3)S(0.222)FS(0.465)PS(0.102)AT(0.022)PS(0.006)QK;S(0.999)PHQLLS(0.977)PS(0.197)S(0.168)FS(0.634)PS(0.017)AT(0.006)PS(0.002)QK 75.512 0.005173 2240200000.0 1262290.0 1262710.0 1136200.0 1321130.0 1227650.0 1055460.0 1132960.0 1151610.0 1440560.0 1101960.0 True False 1192268.2573872714 1202047.5162336493 1209441.2699842767 1446689.7979877808 1324259.0706269967 1048872.4826369921 1247490.6534240532 1147615.3336977935 1178990.617562392 1092197.491711908 1.0916233249341314 1.10057707086432 1.107346683326109 1.3245679549403124 1.2124721771255451 0.9603322573035684 1.1421841405886577 1.0507397630981772 1.0794665127040757 1.0 20.05880231802893 -6.244234797366352 24.98009567184787 1.0556932380600548 1.1690140755580576 0.3720058006620661 0.07799184601704236 1035.2692061569016 1503154.37372261 0.027460920420023033 0.02740059050709295 5.698561014589023e-07 6.244234797366352 0.11332083749800281 S(ph)PHRS(ph)SPSDTRPK ddPTM_KYSE-520_SHP099_60min_R1 1 SPHRSSPSDTRPK 13 2 Q5JRC6;A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q8IWS0-4;Q8IWS0-2 Q5JRC6 PHF6 PHD finger protein 6 2 S(0.997)PHRS(0.384)S(0.329)PS(0.242)DT(0.048)RPK 56.121 0.032803 367890000.0 53028.0 59780.0 55239.0 54053.0 53062.0 49049.0 47209.0 53283.0 66258.0 52517.0 True False 50086.43113130279 56908.079068390674 58799.79432552497 59190.180868372925 57237.67751851888 48742.86699719727 51981.34643543999 53098.17370934572 54227.2174282563 52051.740237607766 0.9622431623355211 1.0932982991272628 1.1296412772582325 1.1371412482691132 1.099630430360986 0.9364310736719651 0.9986476186608471 1.0201037173197505 1.0417945140876719 1.0 15.667658777275822 -6.236414349318531 24.692952532758344 1.000605127827028 1.0903302375561217 0.4034104337936001 0.05141741101872677 686.8582268431747 677743.7945426911 0.017815016846099894 0.017808106559253682 5.802105892015629e-07 6.236414349318531 0.08972510972909364 S(ph)PIALPVK ddPTM_KYSE-520_SHP099_60min_R1 8 SPIALPVK 8 0 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(1)PIALPVK;S(1)PIALPVK;S(1)PIALPVK;S(1)PIALPVK;S(1)PIALPVK;S(1)PIALPVK;S(1)PIALPVK;S(1)PIALPVK 120.12 0.00094995 12028950000.0 8380740.0 6894210.0 6531070.0 6430930.0 6641390.0 7245330.0 6565040.0 7361390.0 8055830.0 7160000.0 True False 7915843.645609009 6563001.803179815 6952073.222281466 7042123.653670392 7164029.608659985 7200109.207951306 7228698.311815996 7335855.056251335 6593094.342948324 7096567.970395705 1.1154467453325358 0.9248134916142939 0.979638784731293 0.9923280778888564 1.0095062343580312 1.014590325631705 1.0186189073325995 1.0337187055565238 0.9290539272578394 1.0 22.75869004898597 -4.2396017007997475 24.518979867178135 0.9923502017760693 1.1154469120331205 0.5435744236523707 0.03460936008799939 3688.8215182942445 4141668.9474006775 0.008712919587575129 0.4106334607229707 5.75967925623846e-05 4.2396017007997475 0.12309671025705127 S(ph)PIINESR ddPTM_KYSE-520_SHP099_60min_R1 3 SPIINESR 8 0 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.999)PIINES(0.001)R;S(0.972)PIINES(0.028)R;S(1)PIINESR 75.652 0.022373 928730000.0 1836760.0 1723790.0 1580880.0 1617020.0 1879050.0 1709270.0 1641200.0 1727730.0 1946710.0 1791830.0 True False 1734871.2613097175 1640976.5409384596 1682786.0542974314 1770701.09462521 2026920.5446679927 1698601.8119084865 1807108.5125684545 1721736.9078852152 1593236.5365655588 1775955.7802226457 0.9768662489401749 0.9239962836984239 0.9475382625160104 0.9970412069624971 1.1413125074622548 0.9564437531747206 1.0175413896521135 0.9694705955287731 0.8971149813008407 1.0 20.760164229588927 -5.269091247589766 7.135754368314141 1.0009738236429564 0.9467950238212144 0.11603730969875647 0.059301141665141825 0.2874620536013704 100.26317074854494 0.017299230721336458 0.02732164182241132 5.381567010405658e-06 5.269091247589766 -0.05417879982174201 S(ph)PIKASDLTK ddPTM_KYSE-520_SHP099_60min_R1 1 SPIKASDLTK 10 1 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 S(1)PIKASDLTK 99.927 0.0014130999999999998 884920000.0 1513400.0 1566700.0 1866300.0 997380.0 1102200.0 1097200.0 918970.0 839520.0 1814400.0 979640.0 True False 1429448.685111897 1491433.3803353547 1986604.6841855785 1092170.6953267697 1188936.8693398584 1090351.9678143263 1011868.4558829096 836607.9010654408 1484950.6973018837 970961.1517483881 1.4721996678630456 1.5360381593535064 2.046018711055889 1.1248345964821789 1.224494787663715 1.1229614756995723 1.0421307320698265 0.861628603326693 1.5293615966282132 1.0 19.889054048864864 -5.292139921860912 24.03271219165624 1.1236436600083932 1.6698807290534399 0.5824114958430615 0.21536836632534387 281.5917756431912 220432.36298919673 0.059620634373902776 0.08844583170283798 5.103405509507174e-06 5.292139921860912 0.5462370690450467 S(ph)PILEEK ddPTM_KYSE-520_SHP099_60min_R1 7 SPILEEK 7 0 E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-4;Q12830;F5GXF5;Q12830-2;A0A0A0MR81 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF 1 S(1)PILEEK;S(1)PILEEK;S(1)PILEEK;S(1)PILEEK;S(1)PILEEK;S(1)PILEEK;S(1)PILEEK 110.87 0.0029711 6927210000.0 10409280.0 9094990.0 8215090.0 8280080.0 9105710.0 8559410.0 8271300.0 8780630.0 10061430.0 8821600.0 True False 9831856.488014776 8658053.028541699 8744647.846008731 9067016.313703176 9822277.572597204 8505987.547238078 9107443.724108843 8750172.043944454 8234527.940009979 8743447.487100957 1.1244828201369688 0.9902333194446197 1.0001372866834901 1.0370070074852709 1.1233872665316311 0.9728413831943065 1.0416307454862492 1.0007690967268252 0.9417941781154656 1.0 23.059770806930032 -7.2785252732747345 1.5575609352157038 0.9711738923769669 1.0414631880801486 0.2450785306575265 0.049646171660249615 0.6302047663532493 2.7454230786142997 0.03981441349034406 0.015196504072982333 5.2659256954497345e-08 7.2785252732747345 0.07028929570318165 S(ph)PILLPK ddPTM_KYSE-520_SHP099_60min_R1 15 SPILLPK 7 0 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 S(1)PILLPK;S(1)PILLPK;S(1)PILLPK;S(1)PILLPK;S(1)PILLPK;S(1)PILLPK;S(1)PILLPK;S(1)PILLPK;S(1)PILLPK;S(1)PILLPK;S(1)PILLPK;S(1)PILLPK;S(1)PILLPK;S(1)PILLPK;S(1)PILLPK 101.64 0.004834399999999999 149711868000.0 41540410.0 33965599.0 32409032.0 32825111.0 33482513.0 34774372.0 34367478.0 35511473.0 36871291.0 33791403.0 True False 39236080.64854569 32333840.64063652 34498170.05900465 35944799.68021051 36117396.283660896 34557332.24544967 37841678.0705027 35388291.988603115 30176394.004007176 33492037.458733737 1.1715047403995447 0.9654187411105025 1.0300409493304368 1.0732341896039879 1.0783875519117616 1.031807404611574 1.1298708869870413 1.0566180702564243 0.9010020379079106 1.0 24.99731480801372 -7.706450292134512 9.21790814104511 0.9508066166136631 1.06414899259167 0.39635741272747105 0.05747819885545636 0.2863246238431166 45.13703257850175 0.037717871666469095 0.014106435544238129 1.965846971845266e-08 7.706450292134512 0.113342375978007 S(ph)PIPCLPLR ddPTM_KYSE-520_SHP099_60min_R1 1 SPIPCLPLR 9 0 Q96JM7-2;Q96JM7 Q96JM7-2 L3MBTL3 Lethal(3)malignant brain tumor-like protein 3 1 S(1)PIPCLPLR 103.7 0.0019114000000000002 70951000.0 76422.0 55672.0 41999.0 56527.0 56719.0 49331.0 55912.0 55203.0 64624.0 71699.0 True False 72182.71931652 52997.433554624375 44706.32274077596 61899.309084537716 61182.462613035175 49023.10693059469 61564.13060853483 55011.51367747708 52889.91063846831 71063.80264097794 1.0157452406704852 0.7457725534668215 0.6291011890629772 0.8710385144636821 0.8609511500831953 0.6898463790104894 0.8663219293170042 0.7741144103335031 0.744259505865087 1.0 16.11682726923883 -10.558768747725777 6.048873007768065 1.000439429644164 0.7949587865458061 0.2496098058402686 0.10390573852430365 0.0006056865305287074 4.4181232470007446e-05 0.09896187739906859 0.023951350403626274 2.7620481947314335e-11 10.558768747725777 -0.205480643098358 S(ph)PIRQDR ddPTM_KYSE-520_SHP099_60min_R1 6 SPIRQDR 7 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR;S(1)PIRQDR 106.4 0.0024533000000000003 20842050000.0 1136680.0 912210.0 917422.0 993990.0 1000684.0 1061170.0 990620.0 889695.0 1111910.0 1107080.0 True False 1073626.0944845963 868386.0623448752 976560.4900471 1088458.5107460106 1079432.1376868852 1054546.8444089752 1090761.5371195225 886608.8557013742 910015.1729700945 1097272.1324952072 0.9784501608030092 0.7914044626014123 0.8899893300182445 0.9919676974488048 0.9837415037892617 0.9610622681275297 0.9940665627214285 0.8080118226325654 0.8293431921037777 1.0 20.065489939653013 -3.9283582045964955 20.581705497567228 0.916101590582508 2.8377586476801837 0.05342944036279651 0.07804576097608293 1708.8065020962013 516630.4878825909 0.0200448397033173 7886.443985287797 0.00011793475126163045 3.9283582045964955 1.9216570570976756 S(ph)PISFLSK ddPTM_KYSE-520_SHP099_60min_R1 7 SPISFLSK 8 0 Q7RTP6;A0A5F9ZHV5;J3KSK6;Q7RTP6-2;Q7RTP6-4;Q7RTP6-3;Q7RTP6-5 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 S(1)PISFLSK;S(1)PISFLSK;S(1)PISFLSK;S(1)PISFLSK;S(0.999)PIS(0.001)FLSK;S(0.992)PIS(0.008)FLSK;S(1)PISFLSK 146.48 0.00049376 2948264000.0 3353490.0 2787803.0 2689676.0 2512035.0 2569210.0 2454498.0 2370506.0 2390065.0 2901229.0 2458828.0 True False 3167465.224683418 2653872.759302384 2863056.8185937605 2750778.051129137 2771392.210194755 2439178.5675321934 2610139.8803891013 2381774.422360365 2374438.9476314196 2437044.6968592345 1.2997156879254288 1.0889717216604968 1.1748068561416019 1.1287351662750502 1.1371938371776333 1.000875597676033 1.0710266757737128 0.9773207793151681 0.9743107915466226 1.0 21.216701280519125 -5.233054861005697 0.3709347241171967 0.9664296951005583 1.3110902156339774 0.7290832273918078 0.05130630478463609 1.6205566976130976 0.2993022970044245 0.05002976748137479 0.23497373183776155 5.8471621687879885e-06 5.233054861005697 0.3446605205334191 S(ph)PISNGTFGFDGHTR ddPTM_KYSE-520_SHP099_60min_R1 1 SPISNGTFGFDGHTR 15 0 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 1 S(1)PISNGTFGFDGHTR 159.34 3.8597e-08 379030000.0 43487.0 46985.0 31801.0 74060.0 74846.0 124130.0 137850.0 149800.0 162490.0 132630.0 True False 41074.68942081475 44727.77007407721 33850.94334339903 81098.64013304903 80735.95438451372 123355.2586263143 151785.22328635218 149280.37876358282 132985.91203956315 131455.00138457867 0.31246197549113053 0.3402515659577205 0.25750974087601486 0.6169308073398486 0.6141717966919824 0.9383839133319231 1.1546553701847855 1.1356006024210143 1.011645891284925 1.0 17.00420950673485 -5.98500839527642 1.157818750961692 1.0971640752011647 0.30533355323734235 0.9394284844095709 0.08220005586236832 0.10250007251655521 0.28998840600652637 0.03814038482570305 0.04464645160402678 1.0351221567068697e-06 5.98500839527642 -0.7918305219638223 down S(ph)PISPELHSAPLTPVAR ddPTM_KYSE-520_SHP099_60min_R1 2 SPISPELHSAPLTPVAR 17 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 S(0.999)PIS(0.001)PELHSAPLTPVAR;S(0.996)PIS(0.004)PELHSAPLTPVAR 164.99 2.5314e-08 805890000.0 336360.0 392840.0 368670.0 481800.0 363250.0 329600.0 269750.0 358970.0 417620.0 324280.0 True False 317701.4402829636 373967.3767351381 392435.05809285585 527590.1271415486 391835.7083902221 327542.84414108796 297018.9625063003 357724.8168542282 341790.7353434818 321407.1314860222 0.9884704138768627 1.163531670893873 1.2209905121844584 1.641500998133556 1.2191257442813237 1.0190901571682538 0.9241206351988411 1.112995891535734 1.0634198866814693 1.0 18.294042414791992 -6.217140021642847 5.301873555792749 1.0243837304691523 1.2648315011673585 0.3293628001754795 0.15859180893378236 0.2588774283093046 18.074049571054726 0.05776265666683844 0.05680896611515563 6.065407421997312e-07 6.217140021642847 0.24044777069820622 S(ph)PISVPGGSALISNLGK ddPTM_KYSE-520_SHP099_60min_R1 4 SPISVPGGSALISNLGK 17 0 P51610-2;P51610;A6NEM2;P51610-4 P51610-2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 S(0.993)PIS(0.007)VPGGSALISNLGK;S(1)PISVPGGSALISNLGK;S(1)PISVPGGSALISNLGK;S(1)PISVPGGSALISNLGK 260.96 1.8355999999999997e-29 11738040000.0 1647240.0 1644770.0 1397830.0 1260610.0 1326210.0 1638240.0 1416830.0 1734030.0 1889450.0 1763560.0 True False 1555864.3135084698 1565752.780349899 1487936.3584070774 1380417.9953837837 1430575.1818973066 1628015.1364857275 1560057.0033282714 1728015.054655645 1546373.5091584253 1747936.2304289169 0.8901150319006115 0.8957722559281738 0.8512532279521208 0.7897416229223936 0.818436712388681 0.9313927522895028 0.8925136833770287 0.9886030305760162 0.884685311877178 1.0 20.737221121598527 -6.278255946888719 21.546696139697417 0.9357938835603736 0.8484846615269461 0.5075405950587362 0.04443687373871901 124.71219393649568 159789.27420142834 0.01615741024255652 0.014311387224328745 5.269192355859091e-07 6.278255946888719 -0.0873092220334275 S(ph)PKPAAPAAPPFSSSSGVLGTGLCELDR ddPTM_KYSE-520_SHP099_60min_R1 9 SPKPAAPAAPPFSSSSGVLGTGLCELDR 28 1 O43294-2;O43294;H3BQC4;H3BSN4;H3BS04;H3BN49 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 S(1)PKPAAPAAPPFSSSSGVLGTGLCELDR;S(1)PKPAAPAAPPFSSSSGVLGTGLCELDR;S(1)PKPAAPAAPPFSSSSGVLGTGLCELDR;S(1)PKPAAPAAPPFSSSSGVLGTGLCELDR;S(1)PKPAAPAAPPFSSSSGVLGTGLCELDR;S(1)PKPAAPAAPPFSSSSGVLGTGLCELDR;S(1)PKPAAPAAPPFSSSSGVLGTGLCELDR;S(1)PKPAAPAAPPFSSSSGVLGTGLCELDR;S(1)PKPAAPAAPPFSSSSGVLGTGLCELDR 165.96 1.0815999999999999e-11 49442530000.0 7211794.0 7492470.0 5823312.0 5662703.0 5382825.0 6680340.0 6375770.0 7041890.0 8595680.0 7968580.0 True False 6811741.410465086 7132520.494773241 6198692.0091486275 6200884.590566255 5806422.703415276 6638645.520113702 7020295.053118804 7017463.327179476 7034921.191459364 7897984.580661421 0.8624657773001924 0.9030810863112528 0.7848447848741578 0.7851223976493201 0.7351777715080084 0.8405493138551741 0.888871709158349 0.8885131713680549 0.8907235915203853 1.0 22.91305312053279 -7.858945014449373 0.7758073162749135 0.994418454869044 0.8180062012754418 0.5723176353465915 0.04680547053842001 0.5167228118459157 0.707259625409582 0.050882175854388104 0.01970278219487653 1.3837415618914598e-08 7.858945014449373 -0.17641225359360224 S(ph)PKPAESPQSATK ddPTM_KYSE-520_SHP099_60min_R1 4 SPKPAESPQSATK 13 1 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(0.999)PKPAES(0.001)PQSATK;S(1)PKPAESPQSATK;S(1)PKPAESPQSATK;S(1)PKPAESPQSATK 124.18 5.0162e-05 1435670000.0 1976010.0 1762180.0 1707600.0 1709070.0 1764310.0 1652630.0 1748940.0 1944520.0 1937300.0 1839370.0 True False 1866396.7862217245 1677522.2277138925 1817674.6282566001 1871499.4989493662 1903151.1594492875 1642315.323158029 1925739.9232095256 1937774.9139743785 1585535.1553587639 1823074.6128082043 1.0237632475978524 0.9201610378029961 0.9970379794037688 1.0265622074932905 1.0439238998110647 0.9008492091435909 1.0563143766470309 1.0629158567402206 0.8697039299540558 1.0 20.79794217695772 -4.951586195043324 24.99962705563315 0.998785300638373 0.9686214442055686 0.015733368792273383 0.06471117040560695 454.56990102487146 234722.938439036 0.01646600231047508 0.034276711024125904 1.117927925819704e-05 4.951586195043324 -0.030163856432804392 S(ph)PKPGPAPHDQELGFFLETGLQR ddPTM_KYSE-520_SHP099_60min_R1 1 SPKPGPAPHDQELGFFLETGLQR 23 1 Q86TV6;Q86TV6-2;G3V3H1 Q86TV6 TTC7B Tetratricopeptide repeat protein 7B 1 S(1)PKPGPAPHDQELGFFLETGLQR 193.18 2.5347e-15 340780000.0 250750.0 267490.0 175510.0 178000.0 223390.0 203380.0 183570.0 183920.0 238560.0 176060.0 True False 236840.39764226746 254639.37888932443 186823.65542592868 194917.06648234866 240969.52208476758 202110.62998001956 202127.04707055245 183282.02444725082 195243.5176082109 174500.24537260743 1.3572496539276844 1.4592494030343468 1.0706211617468346 1.1170016756489112 1.3809122249096524 1.1582254772677032 1.1583195578834515 1.050325310751809 1.1188724531092247 1.0 17.412869539511252 -1.000000000014133 0.16027963647218177 0.9793319983671932 2.540586303767021 0.4807619048706413 0.1066585774229299 59.19731339975426 0.613028782775007 0.3361869604432515 21.8352879362087 0.09999999999674578 1.000000000014133 1.561254305399828 S(ph)PLAGNKDNK ddPTM_KYSE-520_SHP099_60min_R1 3 SPLAGNKDNK 10 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 S(1)PLAGNKDNK;S(1)PLAGNKDNK;S(1)PLAGNKDNK 99.991 0.0014067 2418050000.0 2256430.0 1905610.0 1924820.0 2080610.0 2079850.0 2615030.0 2951510.0 3286000.0 3956010.0 3439180.0 True False 2131261.3298183116 1814061.6352210757 2048896.9770208884 2278350.548841794 2243522.3622722747 2598708.627773872 3249877.434761706 3274601.6329581677 3237698.3068966204 3408711.54084155 0.625239567585159 0.5321839684836507 0.6010766685511477 0.6683905403973579 0.658173135330304 0.7623727020128835 0.9534034768924358 0.9606567155136063 0.9498305351168819 1.0 21.700795087192933 -6.498834558508995 1.212357724633086 0.9842864226493933 0.5931232509714673 0.9576794119857419 0.03467753255728769 0.08735526622447838 0.26244224418747725 0.020405278444293157 0.014859977064704799 3.1707751179425337e-07 6.498834558508995 -0.3911631716779259 S(ph)PLAIR ddPTM_KYSE-520_SHP099_60min_R1 3 SPLAIR 6 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PLAIR;S(1)PLAIR;S(1)PLAIR 105.04 0.010537999999999999 1424920000.0 508590.0 442109.0 410441.0 453087.0 457018.0 465600.0 371648.0 485211.0 467672.0 457549.0 True False 480377.4988509705 420869.42002086225 436898.6835888188 496148.2522544267 492982.71652328334 462694.0176944492 409217.8067749454 483527.9162900986 382754.5538517236 453495.4718277353 1.0592773879635267 0.9280564992735664 0.9634025271034659 1.094053376662807 1.0870730738201233 1.020283655379492 0.9023636005132831 1.0662243535559963 0.8440096486721188 1.0 18.790728619888988 -7.752065526277261 24.998949383565403 0.9220048008487624 1.0119145338748174 0.21206883170704383 0.07156252370932742 284.5091638673192 758766.588325626 0.05052337454373082 0.018515400648734973 1.7698419047270955e-08 7.752065526277261 0.0899097330260551 S(ph)PLAQMEEER ddPTM_KYSE-520_SHP099_60min_R1 2 SPLAQMEEER 10 0 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181;A0A0U1RRM2 G3V1Q4 SEPT7 Septin-7 1 S(1)PLAQMEEER;S(1)PLAQMEEER 153.81 0.00012450000000000002 700920000.0 1051590.0 950952.0 897870.0 841689.0 970169.0 1046854.0 884426.0 967911.0 1136393.0 947835.0 True False 993256.2064073065 905266.8385119475 955748.1368427936 921682.869496975 1046515.7807934871 1040320.195875225 973832.4112459581 964553.5426531258 930052.6773362983 939437.9193044712 1.0572877525985758 0.9636260362815429 1.0173616768103184 0.9811003479392854 1.1139807743424843 1.1073857830280511 1.0366117773561359 1.026734734496612 0.9900097262678927 1.0 19.84143830189288 -3.9349848657927424 21.09810335779878 1.029838865160029 1.7033051839489812 0.032267974397755195 0.04747722980288549 5903.632621947958 977209.373159955 0.012408993138311166 90771.05167350592 0.00011614890884745998 3.9349848657927424 0.6734663187889522 S(ph)PLAQMEEERR ddPTM_KYSE-520_SHP099_60min_R1 8 SPLAQMEEERR 11 1 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181;A0A0U1RRM2 G3V1Q4 SEPT7 Septin-7 1 S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR;S(1)PLAQMEEERR 199.04 2.647e-07 12525110000.0 3465165.0 3452410.0 3128681.0 3050931.0 3315367.0 3304540.0 2908111.0 2970843.0 3713290.0 3022618.0 True False 3272945.3898148257 3286551.041426937 3330360.783326593 3340890.564944146 3576267.521042167 3283915.140103129 3202091.2403082824 2960537.83903297 3039050.1404233403 2995839.956081221 1.0924967414134095 1.0970382562511742 1.1116617817204595 1.1151765828353117 1.1937445168867393 1.0961584023996835 1.0688458953918398 0.9882162873965975 1.0144233954335269 1.0 21.51452912344952 -6.9944247072298245 2.35973608964188 1.0005574899176015 1.1205018560380497 0.7791430353643307 0.02783650388960848 0.14668470633604758 1.6268095619056988 0.016244254304972363 0.008922126478059966 1.0129203415771343e-07 6.9944247072298245 0.11994436612044823 S(ph)PLDNMIR ddPTM_KYSE-520_SHP099_60min_R1 4 SPLDNMIR 8 0 P41212 P41212 ETV6 Transcription factor ETV6 1 S(1)PLDNMIR;S(1)PLDNMIR;S(1)PLDNMIR;S(1)PLDNMIR 131.09 0.0007949 479930000.0 312159.0 321012.0 244981.0 287678.0 280359.0 298255.0 303256.0 341311.0 318542.0 314418.0 True False 294842.91799646127 305590.1016711646 260772.86724345895 315018.8306264553 302421.6582754971 296393.4799129251 333912.0759733481 340127.07180358615 260702.80259035304 311632.50113350217 0.9461237737528272 0.9806104965292147 0.8367961181678699 1.010866419518619 0.9704432534331225 0.9510993841619596 1.071493104085127 1.0914364534072685 0.8365712871478349 1.0 18.24948617888559 S(ph)PLDPDSGLLSCTLPNGFGGQSGPEGER ddPTM_KYSE-520_SHP099_60min_R1 5 SPLDPDSGLLSCTLPNGFGGQSGPEGER 28 0 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 S(0.977)PLDPDS(0.023)GLLSCTLPNGFGGQSGPEGER;S(0.999)PLDPDS(0.001)GLLSCTLPNGFGGQSGPEGER;S(1)PLDPDSGLLSCTLPNGFGGQSGPEGER;S(0.994)PLDPDS(0.006)GLLSCTLPNGFGGQSGPEGER;S(1)PLDPDSGLLSCTLPNGFGGQSGPEGER 197.44 9.5902e-16 1079994000.0 499653.0 487323.0 390132.0 376513.0 414064.0 572161.0 479904.0 578633.0 615857.0 626272.0 True False 471936.2520564385 463911.27159326425 415280.53295327 412296.6823172384 446648.4810981119 568589.9309666533 528417.3797316906 576625.8571769568 504032.89329158235 620723.717312243 0.7603000157621497 0.747371590056229 0.6690263661125281 0.6642193149997532 0.7195608426758955 0.9160112866778622 0.8512923946578967 0.928957346230894 0.8120084334364792 1.0 19.243591745529162 -6.2533447668173725 19.040182948103123 0.8940661815729408 0.7090024949895879 0.7533394453369255 0.05413201729844032 11.9608633556147 28133.830148698435 0.017682442165795696 0.017257083604777405 5.580270263460932e-07 6.2533447668173725 -0.18506368658335293 S(ph)PLEAPLVCSGLK ddPTM_KYSE-520_SHP099_60min_R1 2 SPLEAPLVCSGLK 13 0 Q96HI0-2;Q96HI0 Q96HI0-2 SENP5 Sentrin-specific protease 5 1 S(1)PLEAPLVCSGLK;S(1)PLEAPLVCSGLK 167.89 7.617799999999999e-07 198120000.0 1359830.0 1322850.0 1163700.0 1080400.0 1195380.0 1309990.0 1184330.0 1286560.0 1601720.0 1352040.0 True False 1284397.5191461006 1259298.3003616696 1238713.9639858333 1183080.8911658956 1289449.605218182 1301813.8664938821 1304053.6343469403 1282097.2236453614 1310888.0240753824 1340061.9774712038 0.9584612807012508 0.9397313867065006 0.9243706521122093 0.8828553537489787 0.962231319816617 0.9714579537212908 0.9731293449634218 0.9567447216618845 0.9782293999185957 1.0 20.353868295770372 -5.978120807351285 24.998457537895945 0.9723470957186403 0.9265902783003374 0.5679900679097576 0.020372140465864427 189.98497678366368 217069.63253446782 0.006510114241732975 0.007381287592247595 1.051669291119472e-06 5.978120807351285 -0.04575681741830295 S(ph)PLEATR ddPTM_KYSE-520_SHP099_60min_R1 1 SPLEATR 7 0 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 S(1)PLEATR 126.24 0.0031343000000000005 297700000.0 1622900.0 1462900.0 1472800.0 1413400.0 1467700.0 1507700.0 1480700.0 1456700.0 1558300.0 1617300.0 True False 1532874.5018290565 1392620.088142334 1567739.0445633188 1547729.1110457936 1583199.639929331 1498289.8850470826 1630383.6062394017 1451647.0476963362 1275352.0015462546 1602971.9802403604 0.9562703033643839 0.8687738184503482 0.9780202423302755 0.9655372209398924 0.9876651990460465 0.9346949937468145 1.0171005022776076 0.9055972690668408 0.7956171519323874 1.0 20.612317776899243 -10.10987425707666 4.640128683616261 1.0000046077445397 0.937800569097051 0.09130367568209352 0.06126218191687428 2.977169996389134e-06 5.711989833269118e-07 0.060474201343030984 0.014666061811263486 7.76471898930694e-11 10.10987425707666 -0.06220403864748869 S(ph)PLEATRK ddPTM_KYSE-520_SHP099_60min_R1 6 SPLEATRK 8 1 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 S(1)PLEATRK;S(1)PLEATRK;S(0.999)PLEAT(0.001)RK;S(0.998)PLEAT(0.002)RK;S(1)PLEATRK;S(1)PLEATRK 77.288 0.00937 5047900000.0 8027870.0 6990860.0 6413680.0 6158590.0 7082730.0 6895150.0 6219040.0 6639270.0 7367670.0 6282860.0 True False 7582548.047937914 6655008.592105205 6827116.075050834 6743900.5419524005 7640100.555778881 6852114.811223971 6847721.255181394 6616239.921987261 6029886.851846442 6227198.748391114 1.2176499184158807 1.0687002071075091 1.096338233433567 1.0829749963729332 1.2268920367689902 1.100352676714279 1.0996471337855727 1.0624745072889572 0.9683145015091014 1.0 22.570151894587614 -7.444555302089979 1.761663340862998 0.9830241649853663 1.128306940154084 0.5535858706544345 0.05148941391592974 0.29327209960608747 1.6253216549850305 0.04373064177555151 0.014961250118699546 3.59289642701176e-08 7.444555302089979 0.14528277516871768 S(ph)PLFIFMR ddPTM_KYSE-520_SHP099_60min_R1 3 SPLFIFMR 8 0 C9J417;O43521-11;O43521-10;O43521-14;O43521-19;O43521-4;O43521-8;O43521-12;O43521 C9J417 BCL2L11 Bcl-2-like protein 11 1 S(1)PLFIFMR;S(1)PLFIFMR;S(1)PLFIFMR 94.69200000000001 0.003625 161578600.0 36858.4 48780.7 46199.0 54804.0 58696.0 80445.0 92446.0 113573.0 125278.0 99037.0 True False 34813.79107660124 46437.20195067651 49177.06146101356 60012.55568257657 63315.04126544388 79942.91291544237 101791.34386601462 113179.04177113752 102530.67320138097 98159.60922962015 0.35466513517961323 0.473078512792855 0.5009908031110432 0.6113772880064348 0.645021325597721 0.8144175954127495 1.036998258906053 1.1530103130951053 1.0445301688348798 1.0 16.582841885237194 -6.24306855794633 0.9412403067073397 1.100326099669337 0.4373397154892978 0.9468158468509107 0.06194983220096218 0.11624763577905751 0.22013848542589662 0.03806114024386553 0.03557076174260819 5.713884298857879e-07 6.24306855794633 -0.6629863841800392 down S(ph)PLGFYVHLK ddPTM_KYSE-520_SHP099_60min_R1 2 SPLGFYVHLK 10 0 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(1)PLGFYVHLK;S(1)PLGFYVHLK 186.02 2.6660000000000004e-06 1412320000.0 1569770.0 1525860.0 1442740.0 1397900.0 1556230.0 1498880.0 1277350.0 1306400.0 1350670.0 1167190.0 True False 1482691.728841088 1452555.3952374456 1535741.3288656196 1530755.9957060409 1678696.4472625349 1489524.9339386947 1406477.0037346552 1301868.403316053 1105422.3756198932 1156849.6046600803 1.281663340565994 1.2556129935872289 1.3275202953601475 1.3232108906289737 1.451093072513769 1.287570076471924 1.215782067149449 1.1253566566231261 0.9555454496133073 1.0 20.141769889504864 -7.315150417560586 1.5418487234533929 0.9768067823268523 1.32428993023974 0.8656777622121798 0.05342738849229185 0.15008693093681208 0.635587069809288 0.04730249946110044 0.017562488400614452 4.840047038928489e-08 7.315150417560586 0.3474831479128877 S(ph)PLGGGGGSGASSQAACLK ddPTM_KYSE-520_SHP099_60min_R1 2 SPLGGGGGSGASSQAACLK 19 0 Q68DK7;J3KSZ8;Q68DK7-2;J3QQY0 Q68DK7;J3QQY0 MSL1 Male-specific lethal 1 homolog 1 S(1)PLGGGGGSGASSQAACLK;S(1)PLGGGGGSGASSQAACLK 332.26 1.2483999999999997e-64 1050120000.0 438600.0 406920.0 327800.0 300910.0 265110.0 338510.0 335530.0 381300.0 431660.0 408810.0 True False 414269.9836725761 387370.95240062766 348930.51249854383 329508.3959281096 285972.648730439 336397.2335260915 369448.64685723477 379977.3592960891 353281.4252630795 405188.2614493677 1.0224135866886244 0.9560270848296367 0.8611565183315316 0.8132229565324783 0.705777229842514 0.8302245290196485 0.9117950395100503 0.9377797815190928 0.8718945213254298 1.0 18.62823285342756 -9.629365971909847 14.060955608840953 1.0000041041155936 0.8749075553641873 0.16049355570736756 0.08261767949047308 0.0 0.0 0.08945404910301956 0.021695793711231676 2.347653662839816e-10 9.629365971909847 -0.1250965487514063 S(ph)PLGSVR ddPTM_KYSE-520_SHP099_60min_R1 2 SPLGSVR 7 0 Q92620;J3KSA8;H3BMS7;Q92620-2 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 1 S(1)PLGSVR;S(0.999)PLGS(0.001)VR 131.41 0.0019546 0.0 229318.0 218343.0 202430.0 192579.0 209982.0 195941.0 183143.0 204695.0 240821.0 221240.0 True False 216597.27340590057 207853.47454047514 215478.9616994518 210881.6502590122 226506.38876585173 194718.05953837652 201656.8817434343 203984.96082117193 197093.97700338232 219279.98572211547 0.9877658131571817 0.9478907701311114 0.9826658871298881 0.9617004012680568 1.0329551418928584 0.8879882899351094 0.9196319540032523 0.9302488786171015 0.8988233757601181 1.0 17.74241461377555 -6.273433654191171 24.999082331442615 0.9224973971417965 0.9795106185288254 0.3820972460132619 0.0347530290923889 765.6736465222616 1595850.9264049795 0.011567806753445145 0.010273699020726931 5.328026126937582e-07 6.273433654191171 0.05701322138702891 S(ph)PLHIKDDVLPK ddPTM_KYSE-520_SHP099_60min_R1 8 SPLHIKDDVLPK 12 1 Q5UIP0;Q5UIP0-2 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(1)PLHIKDDVLPK;S(1)PLHIKDDVLPK;S(1)PLHIKDDVLPK;S(1)PLHIKDDVLPK;S(1)PLHIKDDVLPK;S(1)PLHIKDDVLPK;S(1)PLHIKDDVLPK;S(1)PLHIKDDVLPK 161.14 2.3254e-06 14834530000.0 11927690.0 11978330.0 11175630.0 11205640.0 12766390.0 11400030.0 11808790.0 10922590.0 13458470.0 11617350.0 True False 11266037.258439468 11402873.046960115 11896028.99144022 12270620.6565015 13771032.262177147 11328878.18414359 13002537.73588426 10884702.084641667 11014751.108419584 11514429.317161547 0.9784277577394248 0.9903116110118316 1.0331409975924661 1.0656733667393221 1.1959804418315612 0.983885338308395 1.1292385734223735 0.945309731366251 0.9566041707340872 1.0 23.4569395736746 -7.287557209186288 24.933524238473684 0.9632176969675853 1.0538063919877565 0.26796509720695727 0.06541499417200106 1039.4772282234935 992336.3127866681 0.036763409227188584 0.017667400908359263 5.157542207994634e-08 7.287557209186288 0.0905886950201712 S(ph)PLIESTANMDNNQSQK ddPTM_KYSE-520_SHP099_60min_R1 3 SPLIESTANMDNNQSQK 17 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.981)PLIES(0.018)T(0.002)ANMDNNQSQK;S(0.991)PLIES(0.005)T(0.005)ANMDNNQSQK;S(0.835)PLIES(0.126)T(0.04)ANMDNNQSQK 320.8 1.5460999999999998e-47 1205570000.0 907500.0 811110.0 695530.0 698260.0 745290.0 931110.0 861330.0 993240.0 860510.0 940340.0 True False 857159.1659436013 772143.0580990682 740364.9766873472 764622.4204604751 803940.0828799693 925298.5971122814 948401.6421707196 989794.6822639585 704263.0756918228 932009.3191734506 0.9196894798259851 0.8284713920927752 0.7943750791504289 0.8204021190888714 0.8625880303352985 0.9927997264371556 1.0175881535302742 1.0620008425900234 0.7556395211974878 1.0 19.829984854915192 -6.171916013268137 4.54591942390411 0.9725964289182671 0.837402508622675 0.349354550365074 0.08211448236219555 0.24578802326243313 8.862515801062608 0.027494247644548754 0.027396398903944647 6.731068135345283e-07 6.171916013268137 -0.13519392029559218 S(ph)PLLAGGS(ph)PPQPVVPAHK ddPTM_KYSE-520_SHP099_60min_R1 7 SPLLAGGSPPQPVVPAHK 18 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9 Q8NFH5-2 NUP35 Nucleoporin NUP53 2 S(1)PLLAGGS(1)PPQPVVPAHK;S(1)PLLAGGS(1)PPQPVVPAHK;S(1)PLLAGGS(1)PPQPVVPAHK;S(1)PLLAGGS(1)PPQPVVPAHK;S(1)PLLAGGS(1)PPQPVVPAHK;S(1)PLLAGGS(1)PPQPVVPAHK;S(1)PLLAGGS(1)PPQPVVPAHK 157.07 4.2306999999999994e-07 8106680000.0 4158760.0 3803430.0 3563520.0 3587380.0 3600550.0 3431190.0 3473460.0 3578480.0 4226980.0 3666860.0 True False 3928065.292517474 3620707.513735179 3793230.2010335987 3928323.5166148758 3883892.8006728576 3409774.670474694 3824591.2345028124 3566067.0881035123 3459466.9854944474 3634374.473173912 1.0808091795469499 0.9962395291020196 1.043709234981765 1.080880230039767 1.0686550957642624 0.9382012491125951 1.052338239422748 0.9812051879698718 0.9518741150724852 1.0 21.793275646782067 -6.241848858509693 24.9938441609096 0.9877749839628783 1.0517616027648933 0.4744481406457459 0.03637587783753047 826.839180955568 1054892.7366131411 0.012113851111752272 0.012094417728849673 5.729954079421678e-07 6.241848858509693 0.06398661880201495 S(ph)PLLDQVQTFLPQMAR ddPTM_KYSE-520_SHP099_60min_R1 1 SPLLDQVQTFLPQMAR 16 0 Q8N5I9;A0A087WT30 Q8N5I9 C12orf45 Uncharacterized protein C12orf45 1 S(1)PLLDQVQTFLPQMAR 96.163 0.0014977999999999999 30818000.0 21715.0 24810.0 20340.0 18337.0 23303.0 20275.0 17994.0 20770.0 24311.0 18698.0 True False 20510.425662220703 23618.09035943078 21651.148945150657 20079.74296677992 25136.813524067038 20148.45620437063 19813.009124516662 20697.95371775445 19896.735230437673 18532.350266823873 1.1067363484348733 1.2744249930194371 1.1682894308289637 1.0834968408041665 1.3563748343925002 1.0872045862655568 1.069103963569337 1.1168553054389105 1.0736217988528032 1.0 14.177758234647902 -6.484539370823921 24.99934536004366 1.0751361302634665 1.1968879197098479 0.40476177382756773 0.07789441425476949 580.8775009392049 378764.2365220365 0.02639070056896739 0.023269816023470363 3.276880690041181e-07 6.484539370823921 0.12175178944638132 S(ph)PLLEVK ddPTM_KYSE-520_SHP099_60min_R1 2 SPLLEVK 7 0 A0A140T9E6;A2AB20;Q9BW19 A0A140T9E6 KIFC1 Kinesin-like protein KIFC1 1 S(1)PLLEVK;S(1)PLLEVK 94.69200000000001 0.006423999999999999 370660000.0 810180.0 685780.0 597810.0 765720.0 729240.0 734280.0 794030.0 782220.0 719710.0 768580.0 True False 765237.7003462102 652834.099423234 636345.7891298186 838493.7985778878 786627.039191978 729697.086152663 874298.3013860163 779506.6613915212 589028.806412665 761770.9791461924 1.004550870661814 0.8569952351754632 0.835350527323904 1.1007163852811612 1.0326293081860964 0.9578956223437674 1.1477180482327467 1.0232821710603983 0.7732360808400182 1.0 19.53899780166679 -5.252223806846277 24.968698983026798 1.0111649176718798 0.8947685156927966 0.18342167033125778 0.10190960182892518 1062.005205809231 2877394.573926966 0.028059202411119803 0.047761147772949764 5.594692135134184e-06 5.252223806846277 -0.11639640197908319 S(ph)PLLGPVSSGWGEMPNVHSK ddPTM_KYSE-520_SHP099_60min_R1 2 SPLLGPVSSGWGEMPNVHSK 20 0 A0A1B0GU24;Q9HCJ0-2 A0A1B0GU24 TNRC6C Trinucleotide repeat-containing gene 6C protein 1 S(1)PLLGPVSSGWGEMPNVHSK;S(1)PLLGPVSSGWGEMPNVHSK 237.32 2.3106000000000003e-26 1038470000.0 743440.0 800400.0 720780.0 909420.0 744050.0 722260.0 732770.0 718370.0 959480.0 812620.0 True False 702199.9011891024 761947.5825751068 767242.6320887757 995851.0033729068 802602.5019346045 717752.107431256 806845.5427460315 715878.1421388184 785262.6185224939 805420.8190087938 0.871842252666473 0.9460241957897386 0.9525984603092297 1.236435636961147 0.9965008142232309 0.8911516694025504 1.0017689184381788 0.8888249784998447 0.9749718407936016 1.0 19.6193832388642 -6.023653645620425 24.477068435903607 0.9471332453071863 1.009516269885965 0.059801042509279534 0.09529225752337675 1648.178473554823 1705551.493624779 0.033106531247389215 0.033322121141523005 9.469920963667244e-07 6.023653645620425 0.062383024578778645 S(ph)PLLLGAQR ddPTM_KYSE-520_SHP099_60min_R1 10 SPLLLGAQR 9 0 Q96DR7-3;Q96DR7-4;Q96DR7 Q96DR7-3 ARHGEF26 Rho guanine nucleotide exchange factor 26 1 S(1)PLLLGAQR;S(1)PLLLGAQR;S(1)PLLLGAQR;S(1)PLLLGAQR;S(1)PLLLGAQR;S(1)PLLLGAQR;S(1)PLLLGAQR;S(1)PLLLGAQR;S(1)PLLLGAQR;S(1)PLLLGAQR 119.22 0.00077987 7913990000.0 1869456.0 1673488.0 1641063.0 1600807.0 1818005.0 1816724.0 1657960.0 1802938.0 1976915.0 1698310.0 True False 1765753.549011856 1593091.124523302 1746848.546773637 1752947.215979824 1961071.6504665273 1805385.1516364475 1825562.7769302898 1796684.0288868907 1617957.0699716446 1683264.2946651876 1.0490055273007952 0.9464295830264602 1.0377743722777037 1.041397492678651 1.1650408415848905 1.0725500192443342 1.0845372189715496 1.0673808234281255 0.9612020376713729 1.0 20.68283028590109 -5.084775387541431 3.1959414707814755 1.0651727655423777 0.9970489605708658 0.12300353070578585 0.05620167992753342 0.4122057563767303 8.077393685405864 0.015801204903021046 0.03156952237708068 8.226680150342953e-06 5.084775387541431 -0.06812380497151194 S(ph)PLLVTVVESDPRPQGQPR ddPTM_KYSE-520_SHP099_60min_R1 1 SPLLVTVVESDPRPQGQPR 19 1 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 S(0.999)PLLVT(0.001)VVESDPRPQGQPR 67.227 0.010645 684620000.0 42726.0 36525.0 25017.0 33822.0 32184.0 30847.0 28980.0 32812.0 17375.0 21293.0 True False 40355.9036078306 34770.284174857276 26629.635848615264 37036.43271104492 34716.69769808926 30654.472430886348 31909.581217544343 32698.18283037839 14220.137988106384 21104.360585703333 1.912206884636381 1.6475402812446074 1.2618072810343708 1.7549184947178362 1.6450011625373429 1.452518417054176 1.5119899552493792 1.5493567169492464 0.6738009394010966 1.0 14.36525349911706 -7.752043724442004 24.93420507364261 0.8369004810571908 1.5826598837973653 0.7368055464085805 0.18043272069607294 82.25841900851812 218301.65698110088 0.12509260925786722 0.045872441745679574 1.7699307540488736e-08 7.752043724442004 0.7457594027401745 S(ph)PLPGPSEEK ddPTM_KYSE-520_SHP099_60min_R1 3 SPLPGPSEEK 10 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 S(0.994)PLPGPS(0.006)EEK;S(1)PLPGPSEEK;S(0.997)PLPGPS(0.003)EEK 124.42 0.00045274 910560000.0 2796510.0 2306960.0 2183160.0 2185860.0 2339430.0 2462110.0 2364500.0 2556210.0 2763720.0 2548140.0 True False 2641382.015595524 2196130.1787824435 2323889.9867795026 2393603.477197226 2523529.8314641137 2446743.0582166673 2603526.735296193 2547343.1041339 2261898.115711619 2525565.462022922 1.045857672396199 0.8695597923735431 0.9201464074972415 0.9477495290421032 0.9991939901818352 0.9687901957040861 1.030868838858299 1.0086228777034092 0.8956006683350385 1.0 21.268175005871303 -5.647063945801162 5.302663465533918 0.9857429562062681 0.9371414102148015 0.10342275172762294 0.052966203643522745 0.4034373993641122 17.132068658779094 0.015524955161827763 0.020119167164229516 2.2539073209434617e-06 5.647063945801162 -0.0486015459914666 S(ph)PLPTK ddPTM_KYSE-520_SHP099_60min_R1 2 SPLPTK 6 0 D6R9T3;E7EMP6;Q96FZ2 D6R9T3;REV__Q9NP74-3 HMCES Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein 1 S(1)PLPTK;S(1)PLPTK 63.961000000000006 0.051245000000000006 1575860000.0 2128390.0 1688400.0 1672730.0 1698270.0 1775650.0 1751520.0 1693850.0 1736360.0 1930560.0 1875400.0 True False 2010323.9638597262 1607286.7296599338 1780556.8522626285 1859673.070196505 1915383.5529335153 1740588.1139866428 1865080.8883829378 1730336.9724294713 1580018.969457191 1858785.4150391212 1.0815255744931782 0.8646972999979698 0.9579141507440512 1.00047754579426 1.0304489896662994 0.9364115405166386 1.003386874726303 0.9308965727994232 0.8500276345367908 1.0 20.825928799222353 -7.4304514213131005 6.112250026669307 0.9141208905505427 0.9771929745081162 0.12692329167114813 0.06414370577302991 0.42281874513260287 22.66222671647782 0.03481005127432749 0.01625321480357039 3.7114924264876084e-08 7.4304514213131005 0.06307208395757347 S(ph)PLQDLR ddPTM_KYSE-520_SHP099_60min_R1 4 SPLQDLR 7 0 E9PPJ1;Q8NG31-3;Q8NG31-4;Q8NG31-2;Q8NG31;H0YN41 E9PPJ1 CASC5 Protein CASC5 1 S(1)PLQDLR;S(1)PLQDLR;S(1)PLQDLR;S(1)PLQDLR 79.97399999999999 0.015206 2497700000.0 3716300.0 3306780.0 2863370.0 2939990.0 3449630.0 3317860.0 3003800.0 3449000.0 3504990.0 3337530.0 True False 3510149.43073962 3147917.325222029 3047947.411753986 3219405.7656597765 3721096.255290195 3297152.0050423215 3307453.418262931 3437036.224002652 2868572.1696076565 3307962.0807590447 1.0611214231132242 0.9516183222087322 0.9213973248008346 0.9732293439473321 1.1248908434997393 0.9967321041013134 0.999846230856432 1.039019233017928 0.8671720230086296 1.0 21.657511266283656 -3.37966354480847 3.9487453338096294 0.9904114765945006 21.10147811756617 0.10258885221924585 0.06516810961781398 3706.777422880414 177.43301057016774 0.016943101274409095 670352.6166677844 0.0004171924642788536 3.37966354480847 20.11106664097167 S(ph)PLQSVVVR ddPTM_KYSE-520_SHP099_60min_R1 9 SPLQSVVVR 9 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(1)PLQSVVVR;S(0.999)PLQS(0.001)VVVR;S(0.995)PLQS(0.005)VVVR;S(1)PLQSVVVR;S(1)PLQSVVVR;S(1)PLQSVVVR;S(1)PLQSVVVR;S(1)PLQSVVVR;S(1)PLQSVVVR 171.55 7.6486e-05 10559290000.0 2531160.0 2050240.0 1816126.0 1706762.0 1959320.0 2169000.0 2052930.0 2202042.0 2283380.0 2211490.0 True False 2390751.509057634 1951743.3929270217 1933196.387864343 1868972.1473232927 2113507.336994165 2155462.4664503005 2260460.19906602 2194403.630262466 1868775.7513256052 2191897.9191131876 1.0907221035297574 0.8904353509841694 0.8819737319913549 0.8526729876542123 0.9642362076100979 0.9833772128048608 1.0312798690828502 1.0011431696373398 0.8525833867672481 1.0 21.063749180114183 -5.97853106067979 24.73020141123606 0.9769548758716499 0.9210456611257613 0.0709622296011625 0.07450194240451428 497.6193180820682 573207.3818040567 0.023500806356130086 0.02664481571625804 1.0506763079577095e-06 5.97853106067979 -0.055909214745888614 S(ph)PLQVLK ddPTM_KYSE-520_SHP099_60min_R1 1 SPLQVLK 7 0 B1AKE7;B1AKF5;B1AKF6;G5E9N2;Q12816-2;Q12816 B1AKE7 TRO Trophinin 1 S(1)PLQVLK 91.584 0.0071346000000000005 205620000.0 201280.0 158280.0 176040.0 177100.0 188000.0 199210.0 182260.0 221590.0 230300.0 228690.0 True False 190114.5971582675 150675.9912168764 187387.82007395872 193931.53075294325 202794.53042632304 197966.65649680258 200684.6194861847 220821.35600949504 188483.32539055552 226663.9845181278 0.8387507947609683 0.6647548861245128 0.8267207535080284 0.8555904069419253 0.8946923387826716 0.8733926429364868 0.8853837980163745 0.9742233927412253 0.831553922389824 1.0 17.790195648555294 -2.8152395707415807 0.16408779536310983 1.0101090773646129 0.34889445993119794 0.5072170167918271 0.06078537398310794 26.162295672231963 0.4701411299961849 0.1879715930862255 3.7983382525308125 0.0015302430977258855 2.8152395707415807 -0.6612146174334149 S(ph)PLRNPLQAK ddPTM_KYSE-520_SHP099_60min_R1 1 SPLRNPLQAK 10 1 F5H212;P15822;C9JZF8;C9JAW2;C9J2N3 F5H212 HIVEP1 Zinc finger protein 40 1 S(1)PLRNPLQAK 75.669 0.010824 338330000.0 500580.0 488710.0 539510.0 333720.0 551770.0 523490.0 432680.0 525470.0 588530.0 439010.0 True False 472811.82951850945 465231.63803133444 574287.6778465207 365436.6484634236 595191.1598581498 520222.70473124477 476419.51694986474 523647.26721562014 481667.787633972 435120.7129446117 1.0866222072464191 1.069201314005375 1.3198353026223877 0.839851189777632 1.3678759529287547 1.1955824883874606 1.0949134407456034 1.203452861786144 1.1069750837057613 1.0 18.731056169208195 S(ph)PLS(ph)PTETFSWPDVR ddPTM_KYSE-520_SHP099_60min_R1 11 SPLSPTETFSWPDVR 15 0 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 2 S(1)PLS(0.872)PT(0.118)ET(0.009)FS(0.002)WPDVR;S(1)PLS(0.71)PT(0.283)ET(0.006)FSWPDVR;S(1)PLS(0.967)PT(0.032)ETFSWPDVR;S(1)PLS(0.999)PT(0.001)ETFSWPDVR;S(1)PLS(0.916)PT(0.083)ET(0.001)FSWPDVR;S(1)PLS(0.928)PT(0.071)ET(0.001)FSWPDVR;S(1)PLS(0.992)PT(0.008)ETFSWPDVR;S(1)PLS(0.99)PT(0.006)ET(0.004)FSWPDVR;S(1)PLS(0.992)PT(0.008)ETFSWPDVR;S(1)PLS(0.947)PT(0.051)ET(0.001)FSWPDVR;S(1)PLS(0.961)PT(0.039)ETFSWPDVR 220.46 2.7799000000000002e-14 10083140000.0 1763353.0 1703479.0 1603040.0 1506024.0 1732815.0 1784035.0 1652840.0 1878620.0 2215682.0 1931626.0 True False 1665536.2939329415 1621641.311865891 1706374.5233546875 1649156.0681573737 1869177.6821313258 1772900.175810819 1819925.1973639077 1872103.5056932033 1813370.0015979023 1914513.2964222874 0.8699528475698669 0.8470253588190296 0.8912837150535567 0.8613970303780103 0.9763200316364051 0.9260317904941662 0.9505941801317653 0.977848265244051 0.9471702311948448 1.0 20.868546249160136 -5.757394018778708 24.99999504815926 0.9594183908277051 0.867663264462231 0.8247298685562868 0.021547860425042784 41.580735350830885 256963.6847613388 0.006281878297372841 0.007812691239246489 1.748259839579915e-06 5.757394018778708 -0.09175512636547412 S(ph)PLSALAR ddPTM_KYSE-520_SHP099_60min_R1 10 SPLSALAR 8 0 I3L1L3;Q9BQG0;Q9BQG0-2;I3L2H8 I3L1L3 MYBBP1A Myb-binding protein 1A 1 S(1)PLSALAR;S(0.988)PLS(0.012)ALAR;S(1)PLSALAR;S(0.972)PLS(0.028)ALAR;S(1)PLSALAR;S(1)PLSALAR;S(1)PLSALAR;S(1)PLSALAR;S(1)PLSALAR;S(1)PLSALAR 160.16 0.00022599 25912360000.0 2972970.0 2717476.0 2583682.0 2304554.0 2532765.0 2489684.0 2369119.0 2516220.0 2679406.0 2583316.0 True False 2808053.4276312343 2586924.373945364 2750230.275757361 2523578.119270577 2732079.196038438 2474144.9586546114 2608612.668893286 2507491.8201101655 2192893.412728645 2560429.830029438 1.0967117296860072 1.0103476938149956 1.0741283527874463 0.9856072170669731 1.0670392775446718 0.9663006303227476 1.0188182618007127 0.9793245613301328 0.8564551885038117 1.0 21.287954591111344 -6.775238664087575 0.8929627446981888 0.9382266677989851 1.046970832872772 0.4151671596135098 0.04948987836128689 0.5832677818560602 0.9097171020006204 0.03698935732242568 0.021261638675442632 1.6778816942777421e-07 6.775238664087575 0.10874416507378692 S(ph)PLSGIPVR ddPTM_KYSE-520_SHP099_60min_R1 8 SPLSGIPVR 9 0 Q5M775-4;Q5M775;J3KSG2 Q5M775-4 SPECC1 Cytospin-B 1 S(1)PLSGIPVR;S(0.975)PLS(0.025)GIPVR;S(0.998)PLS(0.002)GIPVR;S(0.999)PLS(0.001)GIPVR;S(1)PLSGIPVR;S(1)PLSGIPVR;S(0.983)PLS(0.017)GIPVR;S(1)PLSGIPVR 142.94 0.00037903 9535840000.0 2283380.0 1980476.0 2050260.0 1914270.0 1901528.0 2035286.0 1805400.0 2246980.0 2523410.0 2189470.0 True False 2156716.359594821 1885330.960204918 2182423.0401319885 2096201.645253736 2051167.4353856633 2022583.0251229894 1987907.4510060227 2239185.7508290717 2065222.3539894978 2170072.9991818843 0.9938450736025476 0.8687868845498221 1.005691071661995 0.9659590465592642 0.9452066525683476 0.9320345563884264 0.9160555666816104 1.0318481229309995 0.9516833557065061 1.0 21.049312143692692 -7.255618292763279 24.9973351410186 0.9938243045314983 0.9461697994734897 0.2238406716840592 0.04069748722942374 688.5294198419997 2956750.677689609 0.018952191732949517 0.010588431338517433 5.551133952090588e-08 7.255618292763279 -0.04765450505800861 S(ph)PLSPT(ph)ETFSWPDVR ddPTM_KYSE-520_SHP099_60min_R1 1 SPLSPTETFSWPDVR 15 0 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 2 S(1)PLS(0.379)PT(0.616)ET(0.006)FSWPDVR 223.7 4.4483999999999996e-14 527010000.0 359680.0 342770.0 325320.0 295650.0 324040.0 357890.0 325250.0 340330.0 443400.0 353570.0 True False 339727.83339569654 326302.81469174067 346290.64773040375 323748.48710958636 349540.10446460446 355656.2757574454 358129.44413410244 339149.47466361884 362889.73720439523 350437.64487329766 0.9694387528443946 0.931129459021781 0.9881662338405645 0.9238404944384303 0.9974388013907076 1.014891753099284 1.0219491238265392 0.9677883629946203 1.035532975732672 1.0 18.418798235548433 -5.902133793982981 7.050296882801411 1.0067934065519368 0.9542532596413384 0.5529252691780495 0.0235289697633255 0.16525035479477201 10.304319352160757 0.006865739702696002 0.007804303044888325 1.2527551766555338e-06 5.902133793982981 -0.052540146910598384 S(ph)PLSPTETFSWPDVR ddPTM_KYSE-520_SHP099_60min_R1 9 SPLSPTETFSWPDVR 15 0 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(1)PLSPTETFSWPDVR;S(1)PLSPTETFSWPDVR;S(1)PLSPTETFSWPDVR;S(0.998)PLS(0.002)PTETFSWPDVR;S(1)PLSPTETFSWPDVR;S(0.998)PLS(0.002)PTETFSWPDVR;S(1)PLSPTETFSWPDVR;S(0.998)PLS(0.002)PTETFSWPDVR;S(0.993)PLS(0.007)PTETFSWPDVR 324.84 2.7234999999999996e-43 3389025000.0 793646.0 744139.0 664942.0 615643.0 703450.0 612229.0 543057.0 550011.0 703673.0 510766.0 True False 749620.8742859226 708389.4454645895 707805.2252648169 674153.5256201832 758807.5129170049 608407.8517161832 597954.5012855752 548103.1402145319 575903.721352794 506241.01060993486 1.4807588847508741 1.3993126408528223 1.3981586051513906 1.3316849316651413 1.4989056536584622 1.201814627746485 1.1811656676434434 1.0826920947280827 1.1376077980306798 1.0 18.949464859418004 -6.547370436464692 1.9570071144482546 1.0945764372591087 1.4153681383209011 0.8512743932663714 0.06358034523270581 0.12220553523156888 0.9447312106662644 0.02792511676681597 0.02091595098889072 2.835499424883692e-07 6.547370436464692 0.32079170106179244 S(ph)PLTGYVR ddPTM_KYSE-520_SHP099_60min_R1 8 SPLTGYVR 8 0 H0YNS8;H0YKM5;Q9NP66 H0YNS8 HMG20A High mobility group protein 20A 1 S(0.987)PLT(0.013)GYVR;S(0.995)PLT(0.005)GYVR;S(1)PLTGYVR;S(0.977)PLT(0.023)GYVR;S(1)PLTGYVR;S(0.996)PLT(0.004)GYVR;S(0.999)PLT(0.001)GYVR;S(0.989)PLT(0.011)GYVR 171.46 0.00011902 25196240000.0 1370040.0 1268846.0 1214016.0 1003026.0 1181172.0 1177203.0 1095222.0 1186958.0 1336783.0 1245317.0 True False 1294041.1500929703 1207888.7335833246 1292273.4138542784 1098353.2894692356 1274123.5164506417 1169855.6394157186 1205937.7280966647 1182840.7197360792 1094056.9047571118 1234284.4602219663 1.0484140340390073 0.9786145515970486 1.0469818388719596 0.8898704673570259 1.0322770459424815 0.9478006708480627 0.9770338742495357 0.9583210012409654 0.8863895965767593 1.0 20.23524349384197 -1.000054261666003 0.4066353120635992 0.9523970679111419 2.5013090450252036 0.23852632749551894 0.04826019646196552 105.91882772210352 1.3926592239019313 0.032259453127042814 132.0895806447255 0.09998750657016799 1.000054261666003 1.5489119771140616 S(ph)PLTILQDDNS(ph)PGTLTLR ddPTM_KYSE-520_SHP099_60min_R1 10 SPLTILQDDNSPGTLTLR 18 0 Q99618;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 2 S(1)PLTILQDDNS(1)PGTLTLR;S(0.999)PLT(0.013)ILQDDNS(0.963)PGT(0.023)LT(0.001)LR;S(1)PLTILQDDNS(0.991)PGT(0.008)LTLR;S(1)PLTILQDDNS(1)PGTLTLR;S(1)PLTILQDDNS(1)PGTLTLR;S(0.998)PLT(0.002)ILQDDNS(0.995)PGT(0.005)LTLR;S(0.55)PLT(0.45)ILQDDNS(1)PGTLTLR;S(0.929)PLT(0.071)ILQDDNS(1)PGTLTLR;S(1)PLTILQDDNS(0.989)PGT(0.01)LTLR;S(0.989)PLT(0.011)ILQDDNS(1)PGTLTLR 307.54 1.8432999999999998e-47 1167992000.0 1247382.0 1157667.0 1145795.0 1116928.0 1101611.0 1022690.0 991631.0 1111883.0 1377842.0 993804.0 True False 1178187.233865633 1102050.9396264069 1219654.77903682 1223080.501303351 1188301.5183908106 1016307.0123624072 1091874.7388659327 1108026.1373884424 1127660.625370273 984999.6697278129 1.196129572501485 1.1188338163919782 1.2382286172480137 1.2417065090400767 1.206397885107085 1.031784114854826 1.1085026446431732 1.124900009047339 1.1448335060679582 1.0 19.909763715267626 -6.2423630106494485 24.506253072259376 1.0914664679406971 1.2001476868919756 0.5700705585853898 0.05101825534021236 531.3413777199095 682582.0705790705 0.0172987899207187 0.017267840325176302 5.723174520695693e-07 6.2423630106494485 0.10868121895127847 S(ph)PLTILQDDNSPGT(ph)LTLR ddPTM_KYSE-520_SHP099_60min_R1 1 SPLTILQDDNSPGTLTLR 18 0 Q99618;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 2 S(0.891)PLT(0.109)ILQDDNS(0.355)PGT(0.645)LTLR 124.26 3.0180999999999998e-05 0.0 14464.0 13570.0 14234.0 13279.0 10365.0 12719.0 15032.0 12426.0 16082.0 14649.0 True False 13661.653086730843 12918.076831014736 15151.546415205235 14541.032167523073 11180.666531217219 12639.616003126504 16551.581258182414 12382.897106250204 13161.914194228897 14519.221256749546 0.9409356635005445 0.8897224308782755 1.0435509003736505 1.001502209408331 0.7700596563345067 0.8705436593061581 1.139977204389532 0.8528623462152813 0.9065165384204281 1.0 13.825676455530884 -9.643146171321707 16.302607017944016 0.9999999912469999 0.9357420654761353 0.0367873877008299 0.09961354615231714 0.0 0.0 0.09841979613368584 0.023870306771231968 2.2743318257403832e-10 9.643146171321707 -0.06425792577086464 S(ph)PLTQEQLIPNLAMK ddPTM_KYSE-520_SHP099_60min_R1 5 SPLTQEQLIPNLAMK 15 0 Q9UNE7;H3BTA3;Q9UNE7-2 Q9UNE7 STUB1 E3 ubiquitin-protein ligase CHIP 1 S(1)PLTQEQLIPNLAMK;S(0.895)PLT(0.105)QEQLIPNLAMK;S(0.996)PLT(0.004)QEQLIPNLAMK;S(0.998)PLT(0.002)QEQLIPNLAMK;S(0.998)PLT(0.002)QEQLIPNLAMK 339.58 2.4242e-54 730672000.0 936937.0 942580.0 787806.0 705346.0 751022.0 1003563.0 727448.0 915905.0 1097890.0 992320.0 True False 884963.2368723953 897297.0419585749 838589.2352941678 772381.8717699928 810123.15866935 997299.3910642073 800985.5430483157 912727.939328834 898540.8515546548 983528.8168132781 0.8997837396770496 0.9123240993242049 0.8526331114641585 0.7853169714666618 0.8236903126989424 1.0140011904232222 0.8143996691866955 0.9280134183420824 0.9135887390325867 1.0 19.90760779767225 -6.209082811852751 24.99997471700301 0.922026837618781 0.8539732675567512 0.28620005500715984 0.06112751227614199 530.9313791821328 253516.63817710037 0.020530527262874528 0.02053051592383241 6.178985671791674e-07 6.209082811852751 -0.06805357006202983 S(ph)PLVS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 SPLVSPSK 8 0 P35612 P35612 ADD2 Beta-adducin 2 S(1)PLVS(1)PSK 126.71 0.00090093 546210000.0 942720.0 999930.0 942890.0 903190.0 820920.0 984000.0 917300.0 891350.0 900440.0 1118600.0 True False 890425.4423342705 951891.8618744708 1003670.1980773418 989028.9060460255 885521.7336041331 977858.4910037342 1010029.6359852802 888258.1148926548 736942.7942452102 1108690.07425763 0.8031328709517782 0.8585734498541895 0.905275713548163 0.8920697758643428 0.7987098957272359 0.8819944488620957 0.9110117060095339 0.8011780167576817 0.6646968448226266 1.0 20.080424696932567 -7.32700841038042 12.329516377523131 0.7996379566741278 0.8649543556274301 0.031022519892141664 0.08448663651004697 3.1207114821209285 582.3904194480865 0.04378077893280548 0.02102093270808252 4.709682057189458e-08 7.32700841038042 0.06531639895330221 S(ph)PLYLVSR ddPTM_KYSE-520_SHP099_60min_R1 6 SPLYLVSR 8 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 S(1)PLYLVSR;S(1)PLYLVSR;S(1)PLYLVSR;S(1)PLYLVSR;S(1)PLYLVSR;S(1)PLYLVSR 127.37 0.00084742 3645800000.0 2960641.0 2702752.0 2392349.0 2235005.0 2304438.0 2797189.0 2612303.0 2854820.0 3404249.0 2973988.0 True False 2796408.341838486 2572907.7370065395 2546563.64443374 2447419.203221243 2485784.1601413586 2779730.705886424 2876380.080860413 2844917.295739998 2786123.1957337083 2947640.780047655 0.9486937352635201 0.8728701795762721 0.8639328311886665 0.8302976467782737 0.8433131258623618 0.9430357744750307 0.9758244967739624 0.9651506095983663 0.945204454556591 1.0 21.491129287644196 -6.407638732584163 4.458254070584871 0.967650004683551 0.8694780061405896 0.6878128741031608 0.03201065853477232 0.1431429340078098 4.599146871303411 0.012289288883256082 0.010666973857332472 3.9116615165067053e-07 6.407638732584163 -0.09817199854296144 S(ph)PMEFVEYNK ddPTM_KYSE-520_SHP099_60min_R1 5 SPMEFVEYNK 10 0 Q01970-2;Q01970 Q01970-2 PLCB3 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 1 S(1)PMEFVEYNK;S(1)PMEFVEYNK;S(1)PMEFVEYNK;S(1)PMEFVEYNK;S(1)PMEFVEYNK 151.55 7.0812e-05 745994000.0 1314130.0 1148890.0 973230.0 1052820.0 1062170.0 1013220.0 934060.0 1074880.0 1351370.0 1127040.0 True False 1241232.5892467925 1093695.5998809517 1035965.9630230563 1152879.6962581247 1145756.736079403 1006896.1181451238 1028483.9003471168 1071151.492158877 1105995.2732654572 1117055.302423851 1.1111648515104797 0.9790881413908405 0.9274079454930813 1.0320703851962743 1.0256938341309279 0.9013843056474486 0.9207099219845722 0.9589064120949344 0.9900989421612384 1.0 20.091269180890833 -6.240828726820891 24.917445660686294 0.9495571877847974 1.0091578881056118 0.25505542498582123 0.05120487903726056 1207.1565691621713 1459404.3673503227 0.017457877080857945 0.017439149296467192 5.743429217819023e-07 6.240828726820891 0.05960070032081444 S(ph)PNELVDDLFK ddPTM_KYSE-520_SHP099_60min_R1 14 SPNELVDDLFK 11 0 F2Z2K0;Q9UNZ2;Q9UNZ2-5;Q9UNZ2-4 F2Z2K0 NSFL1C NSFL1 cofactor p47 1 S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK;S(1)PNELVDDLFK 211.51 1.3205e-09 41511970000.0 3148892.0 2591905.0 2419502.0 2594751.0 2688322.0 2562340.0 2348655.0 2722703.0 3088940.0 2580260.0 True False 2974216.683599424 2467385.99327128 2575466.9702600734 2841355.354899666 2899877.646940175 2546347.4856082373 2586079.968063892 2713258.5787766576 2528066.3618406514 2557400.903811901 1.162984137202049 0.9648021902211538 1.0070642293201837 1.1110324355733667 1.1339159388806814 0.9956778703772302 1.011214144880157 1.0609437787921498 0.9885295489152579 1.0 21.28624690769205 -7.763236651229873 24.937529615195526 0.9942647462209652 1.052220368504516 0.13874997928405575 0.060912316114259235 102.46468939088149 1421519.9978268347 0.05062055915759043 0.01563685931170931 1.7248977225418612e-08 7.763236651229873 0.05795562228355078 S(ph)PNNPFSR ddPTM_KYSE-520_SHP099_60min_R1 3 SPNNPFSR 8 0 Q9UNY4 Q9UNY4 TTF2 Transcription termination factor 2 1 S(1)PNNPFSR;S(1)PNNPFSR;S(1)PNNPFSR 115.82 0.0010107 612330000.0 584010.0 542620.0 560090.0 563710.0 577020.0 505390.0 558440.0 514520.0 680280.0 570020.0 True False 551613.8011049276 516551.72071077465 596194.2975756846 617284.8289144088 622428.1912053027 502235.67354509846 614892.5650491877 512735.250209871 556758.3004632529 564970.0662688493 0.9763593401467645 0.9142992727422942 1.0552670542583698 1.0925974060733064 1.101701184482066 0.8889597936788782 1.0883630864021423 0.9075440998070124 0.9854651311708811 1.0 19.107814905877017 -7.2748339369581165 24.942294809860442 0.9598784744740468 1.0155948541862103 0.09715151206271977 0.07283732328475435 1970.1803475179252 3668695.6116431546 0.04065316079805747 0.019696511771028925 5.310874796059091e-08 7.2748339369581165 0.05571637971216348 S(ph)PNQSLR ddPTM_KYSE-520_SHP099_60min_R1 2 SPNQSLR 7 0 Q96B01-2;Q96B01;Q96B01-3 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 S(1)PNQSLR;S(1)PNQSLR 95.523 0.0062339 715600000.0 186160.0 168128.0 189559.0 135663.0 153162.0 174877.0 136730.0 157457.0 174162.0 120411.0 True False 175833.3336992404 160050.87851472688 201778.27644512386 148556.37073143173 165214.978027428 173785.52777567063 150552.00275620574 156910.81841774014 142538.5710667387 119344.25221834045 1.4733288820441315 1.3410857711179387 1.69072471186941 1.2447718928235243 1.3843563888201922 1.4561700672247693 1.2614935362012296 1.3147748257760383 1.194348017749227 1.0 16.8647695603724 -7.988413588659857 0.3789987418647245 0.9645021554374683 1.476912987616934 0.6061672005588605 0.11027576243387625 0.9936662343830286 0.39095500581996334 0.181994496267922 0.09968415022508514 1.0270377604921966e-08 7.988413588659857 0.5124108321794657 S(ph)PNREWEGK ddPTM_KYSE-520_SHP099_60min_R1 1 SPNREWEGK 9 1 H0Y459 H0Y459 NCOR1 1 S(1)PNREWEGK 69.26100000000001 0.048310000000000006 0.0 708440.0 614890.0 579370.0 623650.0 639040.0 696840.0 557540.0 619690.0 702610.0 690080.0 True False 669141.4209598723 585349.7614312938 616717.1172247756 682921.5084927902 689328.8123597739 692490.763080327 613901.5842660337 617540.4400267329 575033.7353567439 683966.4280741151 0.9783249491411641 0.8558165099996178 0.9016774682367125 0.9984722648094481 1.0078401279149884 1.0124630897896763 0.8975609899372297 0.9028812156257116 0.8407338602508614 1.0 19.383565987794125 -9.76076015287221 14.96300184781811 1.000000000000331 0.9342359733361651 0.10117475195636227 0.05990632781583461 0.0 0.0 0.06296902378350308 0.015272231541259638 1.734761787404526e-10 9.76076015287221 -0.06576402666416592 S(ph)PNREWEVLQPAPHQVITNLPEGVR ddPTM_KYSE-520_SHP099_60min_R1 8 SPNREWEVLQPAPHQVITNLPEGVR 25 1 A0A088AWL3;O75376-2;O75376 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 S(1)PNREWEVLQPAPHQVITNLPEGVR;S(1)PNREWEVLQPAPHQVITNLPEGVR;S(1)PNREWEVLQPAPHQVITNLPEGVR;S(1)PNREWEVLQPAPHQVITNLPEGVR;S(1)PNREWEVLQPAPHQVITNLPEGVR;S(1)PNREWEVLQPAPHQVITNLPEGVR;S(1)PNREWEVLQPAPHQVITNLPEGVR;S(1)PNREWEVLQPAPHQVITNLPEGVR 212.24 2.6595999999999998e-21 10904030000.0 1281170.0 1075233.0 1189689.0 1047393.0 1216308.0 1158876.0 997738.0 1097467.0 1479340.0 1163896.0 True False 1210100.9461509231 1023577.1927223633 1266378.2565097015 1146936.915809813 1312024.5197541495 1151643.0250207745 1098599.0940245076 1093660.143127723 1210729.1471266367 1153584.7869373872 1.0489917688352832 0.887301223380228 1.0977764884293992 0.9942372063130067 1.1373455463446243 0.9983167583877663 0.9523349358144196 0.9480535418911373 1.0495363330344882 1.0 20.137692613396002 -9.16257158448865 11.041586173584246 1.00000266048669 1.0105013855250962 0.002060719234126984 0.07041729838994677 0.0 0.0 0.06778020291076785 0.01643911387805256 6.877465421319989e-10 9.16257158448865 0.010498725038406098 S(ph)PNVFR ddPTM_KYSE-520_SHP099_60min_R1 2 SPNVFR 6 0 A0A590UJS4;Q6KC79-2;Q6KC79-3;Q6KC79 A0A590UJS4;Q6KC79 NIPBL Nipped-B-like protein 1 S(1)PNVFR;S(1)PNVFR 78.192 0.028112 647930000.0 186035.0 170753.0 180450.0 154345.0 160511.0 173412.0 148887.0 152084.0 210021.0 180158.0 True False 175715.26769842187 162549.76957452172 192082.09573020833 169013.90239448368 173142.30251733784 172329.67138408488 163937.9509570918 151556.45610067248 171886.4805985665 178561.94028080304 0.9840577864582758 0.910327079325522 1.0757168936904682 0.9465281466402958 0.9696484158105452 0.9650974396508157 0.9181013081471121 0.8487612526070099 0.9626154393722489 1.0 17.446065083342244 -6.688144813198828 4.215204180311336 0.919644291495612 0.9763447315210684 0.11901731414884154 0.05345683623162043 0.3616818454621255 12.35730259278491 0.02100644486577994 0.015617557965947758 2.0504783436587038e-07 6.688144813198828 0.05670044002545638 S(ph)PPADAIPK ddPTM_KYSE-520_SHP099_60min_R1 11 SPPADAIPK 9 0 M0R1Q8;C9JRH2;C9J3R0;C9JMJ4;C9JQZ4;C9JW69;P18754;P18754-2 M0R1Q8 RCC1 Regulator of chromosome condensation 1 S(1)PPADAIPK;S(1)PPADAIPK;S(1)PPADAIPK;S(1)PPADAIPK;S(1)PPADAIPK;S(1)PPADAIPK;S(1)PPADAIPK;S(1)PPADAIPK;S(1)PPADAIPK;S(1)PPADAIPK;S(1)PPADAIPK 103.34 0.0019702 50187820000.0 11701330.0 10245320.0 9462680.0 9153960.0 9694020.0 10023610.0 9109050.0 10663700.0 11883170.0 10234940.0 True False 11052233.898876958 9753119.44866116 10072659.493623327 10023949.606161565 10456884.222571194 9961048.93192067 10029881.66976095 10626710.11362628 9725485.878338195 10144266.394262822 1.0895054870727414 0.961441573949312 0.9929411454849024 0.9881394293658037 1.0308171942808182 0.981938815955605 0.9887241994584681 1.0475582659812945 0.958717515919981 1.0 23.274161201299478 -4.24758773637342 24.625840544785223 0.9962797965639484 1.089505564431415 0.5435391494385896 0.026078619372889546 1522.7818157318711 2707190.318937519 0.0062179654285481395 0.12347750830925926 5.6547350832783946e-05 4.24758773637342 0.09322576786746672 S(ph)PPAIR ddPTM_KYSE-520_SHP099_60min_R1 2 SPPAIR 6 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PPAIR;S(1)PPAIR 73.616 0.03954 1097720000.0 440119.0 372079.0 337849.0 335260.0 359585.0 398471.0 378690.0 356852.0 417645.0 353144.0 True False 415704.72171452537 354203.7663380352 359627.28711751266 367123.0096004052 387882.29374121985 395983.99468368734 416971.68085824273 355614.1637018831 341811.19597368053 350015.4189018746 1.187675454466383 1.0119661798023096 1.0274612708371362 1.0488766773538243 1.1081863049295009 1.131333002203254 1.191295178270815 1.0159957090392582 0.9765603956707573 1.0 18.417058951589556 -7.502092819638157 23.955831747854607 0.9909461048375117 1.094839171525058 0.4058825615877253 0.05765541526231574 470.8130666577698 542618.3438023711 0.03422856686018568 0.016120162065706992 3.1470756331173715e-08 7.502092819638157 0.10389306668754639 S(ph)PPAPGLQPMR ddPTM_KYSE-520_SHP099_60min_R1 5 SPPAPGLQPMR 11 0 P15408-3;P15408-2;P15408;C9JCN8 P15408-3 FOSL2 Fos-related antigen 2 1 S(1)PPAPGLQPMR;S(1)PPAPGLQPMR;S(1)PPAPGLQPMR;S(1)PPAPGLQPMR;S(1)PPAPGLQPMR 114.86 0.00027046 23309710000.0 3437520.0 3314580.0 3154360.0 2486921.0 2925089.0 2791080.0 3510730.0 3679540.0 4263800.0 3318350.0 True False 3246833.91307377 3155342.6015139897 3357695.0927544464 2723277.224119934 3155276.8628202253 2773659.8344214405 3865628.849822964 3666776.5345510906 3489601.401651109 3288952.0006372333 0.987194070465211 0.9593763000805859 1.0209012147650358 0.8280075913519869 0.9593563123477908 0.8433263343107607 1.1753375692542791 1.1148768768412107 1.0610070931333142 1.0 21.649196522785438 -6.764297373776891 24.999999977862384 1.0973784571405023 0.9346421313052422 0.5416802115169492 0.06951526688698947 56.29675058854665 492440.10730721586 0.02794301374060639 0.019780128635174383 1.7206899661868884e-07 6.764297373776891 -0.1627363258352601 S(ph)PPAPPPYK ddPTM_KYSE-520_SHP099_60min_R1 1 SPPAPPPYK 9 0 A0A669KBI7;Q9UMN6 A0A669KBI7 KMT2B Histone-lysine N-methyltransferase 2B 1 S(1)PPAPPPYK 81.33800000000001 0.009448999999999999 535490000.0 322580.0 284920.0 294910.0 266120.0 304410.0 316160.0 269570.0 326010.0 328210.0 321790.0 True False 304685.84435271233 271232.0155263612 313920.3704726836 291411.9647881046 328365.3351440267 314186.72816640296 296820.7663496694 324879.14740130614 268615.3375008002 318939.19094883197 0.955310143749608 0.8504192122625516 0.984264020795884 0.913691302474196 1.0295546751942035 0.9850991570891912 0.9306500260022573 1.0186241033433459 0.8422148958918463 1.0 18.282921859934035 -4.781741500082717 24.999619752935786 0.9639254969209581 0.9028646253287022 0.14753187202936302 0.05779943084218843 367.4735214506449 452499.6087180142 0.014225581800918895 0.029668496651651558 1.652945368409596e-05 4.781741500082717 -0.06106087159225593 S(ph)PPAVVEEK ddPTM_KYSE-520_SHP099_60min_R1 2 SPPAVVEEK 9 0 Q5T7W0-2;Q5T7W0-4;Q5T7W0 Q5T7W0-2 ZNF618 Zinc finger protein 618 1 S(1)PPAVVEEK;S(1)PPAVVEEK 112.94 0.00089566 903030000.0 658500.0 563750.0 620800.0 507160.0 561000.0 548720.0 472250.0 572620.0 643430.0 607860.0 True False 621971.6923127944 536666.6037939979 660817.7613151205 555360.3339167865 605147.5083466335 545295.2349426503 519989.63871584984 570633.7148705125 526599.331550348 602474.8333079243 1.032361283703456 0.8907701602196354 1.0968387802804322 0.9217983942458594 1.0044361604683714 0.9050921379548321 0.8630893938935431 0.947149463052944 0.8740602966916022 1.0 19.200541452509416 -6.267322232472129 24.638859999088904 0.9111507916633003 0.9860012047013232 0.23350378097589153 0.06393545399665682 559.305589892396 2342502.470744519 0.020760245518358453 0.01879433627022556 5.403532495216167e-07 6.267322232472129 0.07485041303802298 S(ph)PPEGDTTLFLSR ddPTM_KYSE-520_SHP099_60min_R1 7 SPPEGDTTLFLSR 13 0 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(1)PPEGDTTLFLSR;S(1)PPEGDTTLFLSR;S(1)PPEGDTTLFLSR;S(1)PPEGDTTLFLSR;S(1)PPEGDTTLFLSR;S(1)PPEGDTTLFLSR;S(1)PPEGDTTLFLSR 135.81 1.4733e-05 10407960000.0 1367011.0 1607099.0 1337214.0 1801221.0 1991434.0 2221303.0 2143593.0 3099840.0 3365640.0 2098645.0 True False 1291180.1747611316 1529891.5517352214 1423412.9540580497 1972408.502283158 2148148.5260905013 2207439.024026491 2360288.2998916325 3089087.378548092 2754524.616880024 2080052.6380211029 0.6207439903970507 0.7355061712239708 0.6843158331859526 0.9482493213054675 1.0327375792442361 1.0612419049772606 1.1347252741339935 1.4851005797079027 1.32425716855925 1.0 20.988188607138195 -5.778165521772385 0.7785004207409524 1.281666349970573 0.6259952255097772 0.7609669639565879 0.12744460490569492 0.3262073975898467 0.42945678456890307 0.07360439129334982 0.12449166451908393 1.6666118990882464e-06 5.778165521772385 -0.6556711244607958 S(ph)PPEHYVQETPLMFSR ddPTM_KYSE-520_SHP099_60min_R1 3 SPPEHYVQETPLMFSR 16 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(1)PPEHYVQETPLMFSR;S(1)PPEHYVQETPLMFSR;S(1)PPEHYVQETPLMFSR 166.91 3.1616e-08 2796050000.0 354515.0 317909.0 287443.0 288115.0 290379.0 329731.0 298777.0 342766.0 366429.0 324100.0 True False 334849.34624186857 302636.1744488628 305972.03570506116 315497.36297506694 313230.1752694964 327673.02652149624 328980.29494252027 341577.0247481854 299894.730523386 321228.7261459844 1.042401625344348 0.9421205197922676 0.9525052113988407 0.9821579992559172 0.975100138233425 1.020061407498728 1.0241309950375146 1.0633452021752052 0.9335862770476416 1.0 18.29324138726483 -6.2549846986411834 23.265505661437526 1.0131779903324662 0.9755355626262687 0.11413585838124352 0.039185045938990096 353.7504769832531 1275071.3865590368 0.012757230116872072 0.012448706272120602 5.559238436126449e-07 6.2549846986411834 -0.03764242770619752 S(ph)PPERPVPGTPK ddPTM_KYSE-520_SHP099_60min_R1 1 SPPERPVPGTPK 12 1 Q9Y4B5 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 S(1)PPERPVPGTPK 86.944 0.0062982 0.0 138400.0 136170.0 122490.0 118030.0 138100.0 123590.0 112060.0 120350.0 141530.0 113360.0 True False 130722.67610643999 129628.18880466312 130385.90139092934 129247.5357129864 148967.68431848512 122818.62896661731 123388.1184002076 119932.53393990103 115831.71968096103 112355.71859274548 1.1634714969895659 1.1537302277823969 1.160474099796715 1.1503422997227981 1.3258576081778857 1.0931230782457688 1.0981917070678986 1.067435956460918 1.0309374647926464 1.0 16.777714029977645 -6.503994545120683 24.443516599277153 1.060603261715559 1.187257733574081 0.6085662731405252 0.0538445057639338 434.5571884563061 562488.2214852629 0.019553943334110736 0.016947104718312636 3.1333250796459943e-07 6.503994545120683 0.12665447185852208 S(ph)PPETAAPVEDMAR ddPTM_KYSE-520_SHP099_60min_R1 2 SPPETAAPVEDMAR 14 0 Q9Y3L3;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;A0A3B3IU28 Q9Y3L3 SH3BP1 SH3 domain-binding protein 1 1 S(0.996)PPET(0.004)AAPVEDMAR;S(0.993)PPET(0.007)AAPVEDMAR 83.633 0.0049214 832610000.0 303714.0 319592.0 294340.0 257295.0 317149.0 298971.0 292062.0 342732.0 392646.0 295463.0 True False 286866.37898115156 304238.320602628 313313.6273606512 281748.2394414374 342106.8219690311 297105.0110913386 321586.4772104359 341543.14268625015 321351.38420017355 292845.4276867359 0.9795829193823704 1.0389041174584408 1.0698942095002102 0.9621056462005977 1.1682163681756077 1.0145455008065187 1.0981440951656074 1.1662915326498027 1.097341306431225 1.0 18.159779843683054 -5.754069146705135 24.999999476331524 1.0956298785611178 1.0185899414923112 0.2986002374566825 0.05809277712710814 220.37514920868392 747514.2464142872 0.016911690142186145 0.021387699502434514 1.761695533661207e-06 5.754069146705135 -0.07703993706880663 S(ph)PPGAAASAAAKPPPLSAK ddPTM_KYSE-520_SHP099_60min_R1 3 SPPGAAASAAAKPPPLSAK 19 1 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 1 S(0.977)PPGAAAS(0.023)AAAKPPPLSAK;S(1)PPGAAASAAAKPPPLSAK;S(1)PPGAAASAAAKPPPLSAK 123.43 1.6045e-05 5319100000.0 5763430.0 4966210.0 4378590.0 4077940.0 4188280.0 5192780.0 4132860.0 5083650.0 6029500.0 5458300.0 True False 5443721.048787135 4727625.817166818 4660840.917391704 4465506.191522632 4517873.807946592 5160369.933856056 4550649.821626654 5066016.004682833 4934694.7913259 5409943.708493146 1.006243565943387 0.8738770811505585 0.8615322392494741 0.8254256295702618 0.8351055115146426 0.9538675838261902 0.8411639874334599 0.9364267500102864 0.9121527056887586 1.0 22.367182151934436 -8.201932474548427 0.9016077279778425 0.9993728239980058 0.8819052422885829 0.26799299239627705 0.05468368306204759 1.1226018061325906 1.8840710828406897 0.05308051247494142 0.018121482549721204 6.281560188648377e-09 8.201932474548427 -0.11746758170942284 S(ph)PPGGPDKDFAWLS ddPTM_KYSE-520_SHP099_60min_R1 4 SPPGGPDKDFAWLS 14 1 Q86UZ6 Q86UZ6 ZBTB46 Zinc finger and BTB domain-containing protein 46 1 S(1)PPGGPDKDFAWLS;S(1)PPGGPDKDFAWLS;S(1)PPGGPDKDFAWLS;S(1)PPGGPDKDFAWLS 98.943 0.0023128 744780000.0 888770.0 821930.0 726770.0 711730.0 777070.0 729670.0 718420.0 729030.0 939770.0 747730.0 True False 839468.1563809308 782443.2490579175 773618.7570731151 779372.6052105735 838220.9880765041 725115.8588726568 791044.9047035275 726501.1650868808 769131.4576738268 741105.693925138 1.1327239329856353 1.0557782182374587 1.043871020577075 1.0516348904064703 1.1310410848916999 0.9784243527157459 1.0673847349814507 0.9802935951538749 1.0378161495430636 1.0 19.499319783806996 -6.2710940698552955 24.931570234774867 1.0149646782350614 1.077579532764242 0.46100218355647093 0.03770279123133202 681.6621309553869 1760269.3138502778 0.012906904020796852 0.011516795978048644 5.356806144645195e-07 6.2710940698552955 0.06261485452918047 S(ph)PPGPAGSSPK ddPTM_KYSE-520_SHP099_60min_R1 2 SPPGPAGSSPK 11 0 Q9H9D4 Q9H9D4 ZNF408 Zinc finger protein 408 1 S(1)PPGPAGSSPK;S(1)PPGPAGSSPK 74.46 0.032511 231530000.0 537220.0 505580.0 528680.0 441430.0 495150.0 522710.0 487130.0 552380.0 627170.0 564280.0 True False 507419.33567848057 481291.1779089489 562759.5587179087 483383.3744792309 534115.4879818823 519447.5730005707 536373.8543306547 550463.9227064609 513291.737669104 559280.9182031966 0.9072709601977269 0.8605535469638307 1.0062198448069495 0.8642944158227283 0.9550039534655261 0.928777571509862 0.9590419355873333 0.9842351219042801 0.9177708749981277 1.0 19.093213583084566 -1.0000000005785274 0.08503186071330823 1.0439008709530306 0.6407177958602431 0.2710837116920478 0.04203055859128891 221.92997571188633 1.3693955712644659 0.9114559550312292 10.465482092181292 0.09999999986678913 1.0000000005785274 -0.4031830750927875 S(ph)PPGSGASTPVGPWDQAVQR ddPTM_KYSE-520_SHP099_60min_R1 7 SPPGSGASTPVGPWDQAVQR 20 0 C9JUG3;Q8TE77-4;Q8TE77;Q8TE77-2 C9JUG3 SSH3 Protein phosphatase Slingshot homolog 3 1 S(1)PPGSGASTPVGPWDQAVQR;S(0.943)PPGS(0.05)GAS(0.007)T(0.001)PVGPWDQAVQR;S(1)PPGSGASTPVGPWDQAVQR;S(0.967)PPGS(0.032)GASTPVGPWDQAVQR;S(1)PPGSGASTPVGPWDQAVQR;S(1)PPGSGASTPVGPWDQAVQR;S(1)PPGSGASTPVGPWDQAVQR 229.82 1.3509e-19 22313830000.0 948952.0 894952.0 751932.0 603312.0 769957.0 862408.0 682846.0 808387.0 1027485.0 842361.0 True False 896311.7408710875 851957.1625696602 800402.7398537379 660650.5910876322 830548.2354439376 857025.3917779953 751874.7376147436 805582.8941759447 840919.6247890347 834898.3368869403 1.073557942651003 1.0204322190248056 0.958682877292791 0.7912946545695368 0.9947896633029324 1.026502693697486 0.9005584325610658 0.9648874103399185 1.0072120013132926 1.0 19.67124100998948 -4.600071063470423 3.1356101058897923 0.9503879824060965 1.0659030824961198 0.25872774180909663 0.06450260761765185 0.3380451441747642 6.363543292565887 0.017614464038623465 0.06463882017777002 2.5114754459430084e-05 4.600071063470423 0.1155151000900233 S(ph)PPIKPLLGMNPFQK ddPTM_KYSE-520_SHP099_60min_R1 3 SPPIKPLLGMNPFQK 15 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91 Q96L91-4 EP400 E1A-binding protein p400 1 S(1)PPIKPLLGMNPFQK;S(1)PPIKPLLGMNPFQK;S(1)PPIKPLLGMNPFQK 162.33 3.3389e-08 1092109000.0 1956527.0 1983198.0 1889010.0 1790764.0 1995387.0 1947353.0 1589083.0 1646338.0 2051368.0 1514743.0 True False 1847994.5470701219 1887922.191239112 2010778.607122867 1960957.6721471685 2152412.604701007 1935198.8475930837 1749723.0175955503 1640627.237736178 1678891.28197904 1501323.5554722198 1.2309102460520989 1.2575052088923584 1.339337279957887 1.3061526044799698 1.4336767027038326 1.2889951939669624 1.1654536500262929 1.0927872487953754 1.1182741227629436 1.0 20.517803500028037 -6.914859388318086 2.382476006424524 1.0789664892668005 1.3157756684498505 0.7800231921970732 0.057710886434464 0.1491609872104994 1.708684677593751 0.031714216595178334 0.01866385949518206 1.2165798293804744e-07 6.914859388318086 0.23680917918305 S(ph)PPITPNWR ddPTM_KYSE-520_SHP099_60min_R1 2 SPPITPNWR 9 0 J3KN34;P26045-2;P26045 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 S(1)PPITPNWR;S(1)PPITPNWR 86.344 0.0047576 1108080000.0 187153.0 136723.0 145488.0 157410.0 178175.0 175143.0 143251.0 147787.0 220195.0 140751.0 True False 176771.2500097439 130154.62185459315 154866.3892690306 172370.19907295797 192196.35882292592 174049.86757100298 157732.20907503244 147274.36139074512 180213.13866423513 139504.05564262113 1.2671405802179199 0.9329809176875891 1.1101210538693185 1.235592745163859 1.3777116223437327 1.2476330295147882 1.1306639677853372 1.055699497138849 1.2918128998765581 1.0 17.089947538931746 -3.877091670888646 21.137839871355027 1.1618879531462978 42.99737401692589 0.06077008150413987 0.13030036162424008 4341.0244283438515 745331.4030833169 0.03291739832413071 14662.620018275195 0.0001327114300847654 3.877091670888646 41.83548606377959 S(ph)PPKADEK ddPTM_KYSE-520_SHP099_60min_R1 2 SPPKADEK 8 1 E9PG73;Q13427;C9JM79;Q13427-2 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(1)PPKADEK;S(1)PPKADEK 75.416 0.034201 352550000.0 706860.0 484200.0 388800.0 548080.0 601870.0 782310.0 697420.0 430620.0 671300.0 895100.0 True False 667649.0667095251 460938.30520098313 413862.6701019951 600169.358413739 649233.744828143 777427.3131068402 767922.019763278 429126.27972746355 549408.8420958747 887170.1103772621 0.7525603702153723 0.5195602284267362 0.46649753554704776 0.6764986234246797 0.7318029961041649 0.8763001638730202 0.8655859916614246 0.48370236407646894 0.6192824078149375 1.0 19.75885123495797 -5.511763257017782 4.602535906874042 0.7456276210738858 0.5720189392145932 0.22337998606535914 0.1508994773484899 0.3269067772041737 17.94157972897193 0.046299022932011595 0.06531225791353422 3.077774116411641e-06 5.511763257017782 -0.17360868185929257 S(ph)PPKADEKER ddPTM_KYSE-520_SHP099_60min_R1 4 SPPKADEKER 10 2 E9PG73;Q13427;C9JM79;Q13427-2 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(1)PPKADEKER;S(1)PPKADEKER;S(1)PPKADEKER;S(1)PPKADEKER 77.91199999999999 0.008473600000000001 5223440000.0 5854840.0 5552880.0 5315970.0 4557120.0 4901730.0 4854840.0 3711170.0 4062610.0 6764300.0 4605590.0 True False 5530060.353865817 5286111.309757194 5658645.932052739 4990227.314651913 5287468.26397139 4824539.14274854 4086331.2811288475 4048517.7541303025 5536073.634126502 4564788.0556948045 1.2114604854362925 1.1580190022541137 1.2396294993353068 1.0932002217334826 1.1583162678002115 1.0569032086231656 0.8951853254240232 0.886901583323145 1.2127778040472152 1.0 22.122116446380012 -6.362123999915051 3.0292013711612307 0.9880794254883108 1.1727608728441024 0.44701633206294267 0.09104570639631573 0.24120337849655504 4.263574991090648 0.03458933666544946 0.03015526212513761 4.3438618036706985e-07 6.362123999915051 0.1846814473557915 S(ph)PPKEYIDEEGVR ddPTM_KYSE-520_SHP099_60min_R1 2 SPPKEYIDEEGVR 13 1 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2;Q9H0E3 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 S(1)PPKEYIDEEGVR;S(1)PPKEYIDEEGVR 118.72 7.2142e-05 1063460000.0 676860.0 546550.0 541330.0 460220.0 559450.0 590560.0 501680.0 594940.0 701360.0 574410.0 True False 639313.2265130414 520292.91761172476 576224.9979586236 503959.17042981106 603475.5321649284 586874.0959828909 552394.710324971 592876.2920000391 574010.7038468088 569321.1742842172 1.1229394854614747 0.9138829559007119 1.0121264129743397 0.885193091691025 1.0599913711687468 1.030831317174778 0.9702690419330933 1.0413740411911374 1.0082370545386574 1.0 19.118883232108526 S(ph)PPKVPIVIQDDSLPAGPPPQIR ddPTM_KYSE-520_SHP099_60min_R1 7 SPPKVPIVIQDDSLPAGPPPQIR 23 1 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 S(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)PPKVPIVIQDDSLPAGPPPQIR;S(1)PPKVPIVIQDDSLPAGPPPQIR 215.2 4.7756e-21 16122350000.0 1850004.0 1934726.0 1467506.0 1285107.0 1384837.0 1944989.0 1462423.0 1861280.0 1956884.0 2028656.0 True False 1747380.5902284586 1841778.858877069 1562103.7848526204 1407243.18289849 1493815.7932553075 1932849.6021939614 1610258.988713073 1854823.6541060195 1601563.194631228 2010683.686110483 0.8690479772124852 0.9159963208533572 0.7769018049151198 0.6998829266977823 0.7429392318515212 0.9612897421637285 0.8008514714853028 0.9224840619729884 0.7965266768187352 1.0 20.939254708961887 -6.253791635212708 24.98503770804876 0.8854244624905799 0.8003936608627907 0.2471537713746903 0.08206375503979095 1028.9476509819926 3361554.6233946583 0.028519607893534086 0.028012434474375868 5.57453138341509e-07 6.253791635212708 -0.0850308016277892 S(ph)PPLDSDPPIPIDDCCWHMEPLS(ph)PIPIDHWNLER ddPTM_KYSE-520_SHP099_60min_R1 1 SPPLDSDPPIPIDDCCWHMEPLSPIPIDHWNLER 34 0 Q8IY92-2;Q8IY92 Q8IY92-2 SLX4 Structure-specific endonuclease subunit SLX4 2 S(0.993)PPLDS(0.007)DPPIPIDDCCWHMEPLS(1)PIPIDHWNLER 104.51 0.00042021 34696000.0 9141.3 10608.0 7998.1 10565.0 11767.0 7267.1 11144.0 10052.0 11697.0 10467.0 True False 8634.213866270233 10098.375757067379 8513.670323412465 11569.09442351692 12692.995954928418 7221.743333306128 12270.544274959086 10017.131958154434 9573.119657374411 10374.270523202773 0.8322719025843038 0.9734058635237691 0.8206524308741567 1.1151718472775356 1.2235073229042617 0.69612059153019 1.182786225548598 0.9655745852925683 0.9227752096847164 1.0 13.340722275087794 -5.25200349648005 24.864892266142526 1.0160748376365678 0.8852396504134292 0.16276212440162863 0.14466365904902195 1245.3703256435626 3281719.214064592 0.03883905432786285 0.06614617470256669 5.597530949367965e-06 5.25200349648005 -0.13083518722313858 S(ph)PPLGLISR ddPTM_KYSE-520_SHP099_60min_R1 4 SPPLGLISR 9 0 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 S(1)PPLGLISR;S(1)PPLGLISR;S(1)PPLGLISR;S(1)PPLGLISR 100.82 0.0023838 10944960000.0 397978.0 407937.0 389010.0 294184.0 361988.0 363175.0 363585.0 421613.0 443835.0 372934.0 True False 375901.3669905261 388339.09419407987 414086.2070380067 322143.15891035536 390474.3961700204 360908.29011207435 400339.72004764836 420150.52290821413 363245.7521698532 369630.09489826154 1.0169663460276164 1.0506154654451711 1.1202718954796724 0.8715284912042223 1.056392327246774 0.9764039646485284 1.0830820476288314 1.1366783406093004 0.9827277518348023 1.0 18.495722698704082 -6.7776708850976055 24.987708237980108 1.0620118950592716 1.0170610667585491 0.04469727691223735 0.07232464802432878 681.3545372006338 1048906.6016483821 0.029896635720735757 0.02022388045277111 1.6685111564684257e-07 6.7776708850976055 -0.0449508283007225 S(ph)PPLIGSESAYESFLSADDK ddPTM_KYSE-520_SHP099_60min_R1 8 SPPLIGSESAYESFLSADDK 20 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.794)PPLIGS(0.205)ES(0.002)AYESFLSADDK;S(0.552)PPLIGS(0.431)ES(0.016)AYESFLSADDK;S(0.973)PPLIGS(0.023)ES(0.003)AYESFLSADDK;S(0.995)PPLIGS(0.005)ES(0.001)AYESFLSADDK;S(1)PPLIGSESAYESFLSADDK;S(1)PPLIGSESAYESFLSADDK;S(0.999)PPLIGSESAYESFLSADDK;S(0.977)PPLIGS(0.02)ES(0.003)AYESFLSADDK 275.02 6.4814e-36 1091129000.0 1483311.0 1291659.0 1063412.0 1263224.0 1118136.0 1302782.0 1290940.0 1484056.0 1428324.0 1399253.0 True False 1401028.7819228303 1229605.762820314 1131961.239039358 1383280.4291578564 1206126.941876421 1294650.8542955539 1421440.813560273 1478908.1561172735 1168976.3667179332 1386856.7070223624 1.0102188458466599 0.8866134162197098 0.8162063415114635 0.9974213068686927 0.8696838943556212 0.9335145063942631 1.024937043865306 1.0663741600908065 0.8428962853904156 1.0 20.403387302373105 -6.591712879471975 6.553935440091549 0.9885460757043085 0.9122279175950446 0.14971247728114612 0.07568838580887548 0.3693786356862584 27.70479466134766 0.02857787000131348 0.022068097122852577 2.5602779770693767e-07 6.591712879471975 -0.0763181581092639 S(ph)PPLIGSESAYESFLSADDKASGR ddPTM_KYSE-520_SHP099_60min_R1 6 SPPLIGSESAYESFLSADDKASGR 24 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(1)PPLIGSESAYESFLSADDKASGR;S(0.907)PPLIGS(0.085)ES(0.007)AY(0.001)ESFLSADDKASGR;S(0.997)PPLIGS(0.002)ES(0.001)AYESFLSADDKASGR;S(1)PPLIGSESAYESFLSADDKASGR;S(1)PPLIGSESAYESFLSADDKASGR;S(0.998)PPLIGS(0.002)ESAYESFLSADDKASGR 193.34 2.2311999999999997e-15 7998900000.0 2740500.0 2750980.0 2566070.0 2217920.0 2212600.0 2119260.0 1597178.0 1853560.0 3039060.0 1991020.0 True False 2588479.0019486947 2618818.7914948384 2731482.9780571642 2428710.4499580353 2386719.032028097 2106032.9122404195 1758636.339195138 1847130.4329841547 2487243.3124681814 1973381.111790121 1.3116974650682642 1.3270719861705877 1.3841639416419382 1.2307356320821727 1.2094567125267675 1.067220568625979 0.8911792702828798 0.9360231644806613 1.2603968374927428 1.0 20.912238174647218 -6.015936792065355 1.66808555709588 1.0138573481223727 1.3307796043172666 0.6638947631193999 0.09619408936086032 0.22206798693484425 1.2515265440198613 0.038515680690042464 0.04212792997038671 9.639693110971172e-07 6.015936792065355 0.3169222561948939 S(ph)PPLMAK ddPTM_KYSE-520_SHP099_60min_R1 1 SPPLMAK 7 0 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7 Q5VZ89-5 DENND4C DENN domain-containing protein 4C 1 S(1)PPLMAK 59.35 0.04481 1325500000.0 1916500.0 1571300.0 1412100.0 1404700.0 1647700.0 1613500.0 1591100.0 1634800.0 1670600.0 1583300.0 True False 1810187.9245519673 1495812.3894306151 1503126.225439884 1538202.2656615463 1777364.6158694278 1603429.5480025625 1751943.9156395711 1629129.260365187 1367261.1523988815 1569273.1937887603 1.1535199426822278 0.9531880078950525 0.9578486597421734 0.9802004340288268 1.1326036938018829 1.0217657157141244 1.1164046659140219 1.0381425406445093 0.8712703166093388 1.0 20.581665101371975 -7.731461629170812 21.830650115873343 0.9356355851475405 1.040767947031007 0.25884137525261397 0.07330460703758179 62.220350305512774 45311.212502398004 0.05003742147902298 0.018899278313477857 1.8558307687347475e-08 7.731461629170812 0.10513236188346642 S(ph)PPLMVK ddPTM_KYSE-520_SHP099_60min_R1 3 SPPLMVK 7 0 D6RCP5;Q8N264-3;Q8N264-2;Q8N264 D6RCP5 ARHGAP24 Rho GTPase-activating protein 24 1 S(1)PPLMVK;S(1)PPLMVK;S(1)PPLMVK 72.234 0.04481 306360000.0 1333490.0 1123070.0 1042350.0 1060780.0 1082770.0 1144830.0 1033540.0 1199340.0 1346740.0 1147080.0 True False 1259518.6514535889 1069116.031437563 1109541.5488189687 1161596.2122648647 1167977.838881434 1137684.6913168745 1138020.3095783582 1195179.76946806 1102205.964552655 1136917.7636147363 1.1078361969198662 0.9403635563212565 0.9759206728297329 1.0217064500528739 1.027319544351163 1.000674567437226 1.0009697675583118 1.0512455761691017 0.9694685049587772 1.0 20.11669647323248 S(ph)PPLPAVIR ddPTM_KYSE-520_SHP099_60min_R1 9 SPPLPAVIR 9 0 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR;S(1)PPLPAVIR 93.556 0.003575 85189860000.0 806699.0 736896.0 642879.0 567153.0 663191.0 669826.0 637040.0 675043.0 797609.0 683153.0 True False 761949.7983554115 701494.4100565532 684320.0089827683 621055.0505992328 715380.3586593809 665645.3674746613 701438.2201112647 672701.4333892209 652783.3116866502 677100.795904992 1.1253122178611723 1.0360265625134253 1.010661947410839 0.9172268801857628 1.0565345115319582 0.9830816497342619 1.0359435764268214 0.9935026475491125 0.9640858726419899 1.0 19.36901108951922 -4.308780713587208 2.052650363397094 0.9953280785432497 1.1539378467839967 0.5515383524680184 0.03579769631019193 0.47388477943847324 2.3801811875598697 0.009422099546629944 0.13520568357717852 4.9115581070786864e-05 4.308780713587208 0.15860976824074702 S(ph)PPLQLSEAELLNQLQR ddPTM_KYSE-520_SHP099_60min_R1 6 SPPLQLSEAELLNQLQR 17 0 O15015-1;O15015 O15015-1 ZNF646 Zinc finger protein 646 1 S(1)PPLQLSEAELLNQLQR;S(1)PPLQLSEAELLNQLQR;S(1)PPLQLSEAELLNQLQR;S(1)PPLQLSEAELLNQLQR;S(1)PPLQLSEAELLNQLQR;S(1)PPLQLSEAELLNQLQR 179.46 7.8047e-09 1510235000.0 66699.3 55032.799999999996 57364.399999999994 42451.3 52486.0 63677.3 55496.9 56603.4 67025.9 64080.1 True False 62999.35686724182 52388.94168208308 61062.20101028521 46485.85878855128 56616.3495955106 63279.866350804856 61107.06824954924 56407.05601673289 54855.68614543997 63512.400167563435 0.9919221553748864 0.8248616261370446 0.9614217199977655 0.7319178407036833 0.8914219813161032 0.9963387650892568 0.962128152743901 0.8881266629495238 0.8637004112695373 1.0 15.954750670863335 -6.014485104648137 24.54446508268184 0.9371609809034739 0.8712495885735909 0.13530185648451376 0.0775454656621015 1100.6889372987825 1865076.4356484024 0.024921491221929378 0.025844495278882742 9.67196898821603e-07 6.014485104648137 -0.06591139232988297 S(ph)PPLS(ph)PVGTTPVK ddPTM_KYSE-520_SHP099_60min_R1 2 SPPLSPVGTTPVK 13 0 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 2 S(1)PPLS(1)PVGTTPVK;S(1)PPLS(1)PVGTTPVK 160.87 4.7658999999999996e-06 243030000.0 687810.0 657580.0 564870.0 679060.0 732200.0 799850.0 909660.0 1149390.0 1070370.0 1032900.0 True False 649655.8081847585 625988.8697522971 601282.4240239558 743597.6582331669 789819.974351881 794857.8394607081 1001617.3102260662 1145403.034359644 876017.78983191 1023749.3095840396 0.6345848559826827 0.6114669518132746 0.5873336552170798 0.7263474087570312 0.7714974427409317 0.7764184376189396 0.9783814268290292 1.118831557332169 0.8556956098830929 1.0 19.96543104823806 -6.29859159141108 0.9874396301850512 1.008991693077566 0.6158399017411541 0.8166964611410665 0.07305219113112277 0.21366882367413778 0.43981286326640534 0.04317661177239236 0.03791454254175379 5.028152124388569e-07 6.29859159141108 -0.39315179133641187 S(ph)PPLSPVGTTPVK ddPTM_KYSE-520_SHP099_60min_R1 5 SPPLSPVGTTPVK 13 0 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 S(1)PPLSPVGTTPVK;S(1)PPLSPVGTTPVK;S(1)PPLSPVGTTPVK;S(1)PPLSPVGTTPVK;S(1)PPLSPVGTTPVK 200.76 9.7524e-09 3166170000.0 2750560.0 2714790.0 2075040.0 1884020.0 1972490.0 2689480.0 2008360.0 2613500.0 2377270.0 2514220.0 True False 2597980.953694581 2584367.4134171302 2208800.398581391 2063076.6943487306 2127713.741067115 2672693.957708049 2211384.6285047387 2604434.3784954837 1945617.694099895 2491945.9668335603 1.0425510778613536 1.0370880620260827 0.88637571920873 0.8278978444184403 0.8538362265417561 1.0725328692034843 0.8874127520969797 1.0451407908353885 0.7807623921204567 1.0 21.248841355893795 -4.750220665466681 23.881766317998892 0.919596298500807 1.0398197349888363 0.225743882983658 0.0893184933617585 184.98195231274119 393765.6606649577 0.022411479407641988 0.05799633988171219 1.7773760939746327e-05 4.750220665466681 0.12022343648802924 S(ph)PPLVK ddPTM_KYSE-520_SHP099_60min_R1 5 SPPLVK 6 0 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(1)PPLVK;S(1)PPLVK;S(1)PPLVK;S(1)PPLVK;S(1)PPLVK 66.07300000000001 0.047811 11167000000.0 17730700.0 14869000.0 13964100.0 14349200.0 15054400.0 15008400.0 14999200.0 14732100.0 16665900.0 15086100.0 True False 16747142.725725845 14154670.921176001 14864248.229349956 15712943.653755708 16239095.63218106 14914727.008516679 16515465.514085282 14680997.783597995 13639792.67315007 14952448.8908082 1.1200267493320712 0.9466456648367063 0.9941012564495395 1.050860883625224 1.0860492318528376 0.9974772104177055 1.1045324839222772 0.9818457090746469 0.9122112887832664 1.0 23.83387845052748 -7.510716778710572 23.80757780362398 0.9530799040812585 1.0378783232148654 0.307592369800058 0.05424384106009841 364.1380297229014 712829.5865394166 0.03138097707034243 0.013783641778027777 3.0851992796535094e-08 7.510716778710572 0.08479841913360686 S(ph)PPPETIK ddPTM_KYSE-520_SHP099_60min_R1 5 SPPPETIK 8 0 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 S(1)PPPETIK;S(1)PPPETIK;S(1)PPPETIK;S(1)PPPETIK;S(1)PPPETIK 123.86 0.00089707 4601010000.0 4461550.0 3905670.0 3582650.0 3341220.0 3641340.0 3595920.0 3548010.0 3524970.0 4297730.0 3597120.0 True False 4214058.927620578 3718035.7506698123 3813593.3514426765 3658768.5442255763 3927892.7416095072 3573476.5294412035 3906677.4760406995 3512742.70180418 3517370.568956802 3565252.3153170147 1.1819805598375643 1.042853470621535 1.0696559497510851 1.0262299048251922 1.1017152207529657 1.0023067691699843 1.0957646557739704 0.9852718380443249 0.986569885627869 1.0 21.765572750109897 -1.0000006125567908 1.0284110672921278 1.032290505378632 177.75177473880285 0.5408708970612381 0.040752493777697435 1373.285741008665 1.6031991583249374 0.01238958089726659 572386.3383352766 0.09999985895368595 1.0000006125567908 176.71948423342423 S(ph)PPPFFYR ddPTM_KYSE-520_SHP099_60min_R1 6 SPPPFFYR 8 0 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 S(1)PPPFFYR;S(1)PPPFFYR;S(1)PPPFFYR;S(1)PPPFFYR;S(1)PPPFFYR;S(1)PPPFFYR 76.221 0.01565 6294340000.0 108587.0 102108.0 108360.0 99793.7 96661.0 108157.0 95328.7 110815.0 127435.0 113930.0 True False 102563.46264718223 97202.5784127674 115345.05898213001 109278.06324393014 104267.67077414265 107481.95204419784 104965.45531445548 110430.60862941535 104296.01637492591 112920.66883619883 0.9082789156691887 0.8608041328002416 1.0214698528703188 0.9677419056244467 0.9233709988504576 0.9518359495382521 0.9295504215150986 0.9779485878675096 0.9236220211041813 1.0 16.78495005353551 -1.0001653291460402 0.009364964922726374 1.7862742874410273 0.0025440979554340794 0.1848864603400857 0.04047858951236366 27138.609005845534 19.700455196737863 1632.3130830969073 2153.3976351239767 0.0999619388024013 1.0001653291460402 -1.7837301894855933 S(ph)PPPGMGLNQNR ddPTM_KYSE-520_SHP099_60min_R1 8 SPPPGMGLNQNR 12 0 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 S(1)PPPGMGLNQNR;S(1)PPPGMGLNQNR;S(1)PPPGMGLNQNR;S(1)PPPGMGLNQNR;S(1)PPPGMGLNQNR;S(1)PPPGMGLNQNR;S(1)PPPGMGLNQNR;S(1)PPPGMGLNQNR 105.66 0.00086692 4272670000.0 1367577.0 1264295.0 1166733.0 1236122.0 1268528.0 1260868.0 1156623.0 1403945.0 1478783.0 1159281.0 True False 1291714.7776128408 1203556.3704545144 1241942.476018804 1353602.66322637 1368353.9366629915 1252998.4551167628 1273545.7403926784 1399075.0424782252 1210273.2842858091 1149010.6722469705 1.1241973715412081 1.0474718812671044 1.0808798438661138 1.1780592608241884 1.1908974996612347 1.0905020165447523 1.1083846052553812 1.217634506163669 1.053317704977479 1.0 20.1319607674181 -5.137022529028121 14.970614236717356 1.130157365481029 1.0804242431104107 0.04328834697547723 0.06444379863739783 2.4785784513272184 289.0934265669642 0.01671506467473771 0.028954489067805286 7.294196706245538e-06 5.137022529028121 -0.04973312237061833 S(ph)PPPGPDGHAK ddPTM_KYSE-520_SHP099_60min_R1 11 SPPPGPDGHAK 11 0 P57081-3;P57081-2;P57081 P57081-3 WDR4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 1 S(1)PPPGPDGHAK;S(1)PPPGPDGHAK;S(1)PPPGPDGHAK;S(1)PPPGPDGHAK;S(1)PPPGPDGHAK;S(1)PPPGPDGHAK;S(1)PPPGPDGHAK;S(1)PPPGPDGHAK;S(1)PPPGPDGHAK;S(1)PPPGPDGHAK;S(1)PPPGPDGHAK 161.21 1.3705999999999999e-05 26804730000.0 15149260.0 12264540.0 11696220.0 11817510.0 13341270.0 13766230.0 12166290.0 13599570.0 15313490.0 13860270.0 True False 14308900.348498894 11675333.08895014 12450177.055813685 12940642.597336076 14391152.047557414 13680309.852246266 13396177.324748011 13552396.26583351 12532946.237668326 13737478.790926874 1.041595809993128 0.8498890711053393 0.9062927226527617 0.9419954559553475 1.0475832040637811 0.9958384693763191 0.9751554509111031 0.9865271839243454 0.9123177861388875 1.0 23.711613918034033 -5.538852570892623 24.962060136694095 0.9863348308458243 0.9242924939913201 0.17428164412793712 0.05408501336618565 351.8195483006404 549780.4485911429 0.015710878215705763 0.020288767076035455 2.891661342449195e-06 5.538852570892623 -0.06204233685450422 S(ph)PPPKATEEK ddPTM_KYSE-520_SHP099_60min_R1 4 SPPPKATEEK 10 1 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 S(1)PPPKATEEK;S(1)PPPKATEEK;S(1)PPPKATEEK;S(1)PPPKATEEK 101.3 0.0012752 3157590000.0 5062310.0 4449570.0 4419410.0 3908050.0 4229080.0 3983030.0 3791250.0 3917750.0 5413920.0 4076440.0 True False 4781493.572835204 4235805.978259266 4704292.239906016 4279469.897001919 4561884.535826352 3958170.4323400403 4174506.549034332 3904160.239659728 4430888.601816919 4040325.913022334 1.1834425429453648 1.0483822516908554 1.1643348435688463 1.0591892805500671 1.129088255262524 0.9796661253446165 1.03321034958579 0.966298344169778 1.0966661346639799 1.0 21.946040242038002 -6.2550005823757555 24.902328713859607 1.0141894715792528 1.1125121085580123 0.4996905728431523 0.05079213800991764 409.13503300375527 1582350.1382618453 0.015663134462350955 0.015291934554798072 5.559035118201198e-07 6.2550005823757555 0.09832263697875954 S(ph)PPPKATEEKK ddPTM_KYSE-520_SHP099_60min_R1 2 SPPPKATEEKK 11 2 Q9NQG5 Q9NQG5 RPRD1B Regulation of nuclear pre-mRNA domain-containing protein 1B 1 S(1)PPPKATEEKK;S(1)PPPKATEEKK 58.172 0.029327 1803110000.0 1632980.0 1499310.0 1555490.0 1151210.0 1229660.0 1111450.0 893760.0 935820.0 1691270.0 1081560.0 True False 1542395.3441350749 1427280.8970898073 1655759.3742719959 1260620.6522760927 1326427.246191661 1104513.028278557 984109.9830570198 932573.8588420309 1384178.001447176 1071978.2198409468 1.4388308601679662 1.3314457986857027 1.544583036880793 1.1759759936756322 1.2373639889702868 1.0303502513721197 0.9180316958333683 0.8699559763260862 1.291237056712357 1.0 20.03184416313603 -5.790828104619663 1.3672915188086092 1.006978940072637 1.4249389370891439 0.6435437310017592 0.12776334435534192 0.2565013336214923 1.003537164910735 0.04942153767051337 0.06745704453024168 1.6187206065355203e-06 5.790828104619663 0.4179599970165069 S(ph)PPPPHRPR ddPTM_KYSE-520_SHP099_60min_R1 5 SPPPPHRPR 9 1 O43281-3;O43281-2;O43281 O43281-3 EFS Embryonal Fyn-associated substrate 1 S(1)PPPPHRPR;S(1)PPPPHRPR;S(1)PPPPHRPR;S(1)PPPPHRPR;S(1)PPPPHRPR 80.763 0.0066506000000000004 2976780000.0 103873.0 79190.0 92388.9 119835.0 86202.3 75798.6 86938.2 67382.0 131821.2 59875.3 True False 98110.9576243081 75385.59353338674 98344.4363214667 131224.08237029338 92985.93058600542 75325.51282133692 95726.7616910667 67148.26756907695 107885.79302202992 59344.851424278495 1.6532345312127625 1.270297114646509 1.6571688016937747 2.211212585774686 1.566874435681274 1.2692847149082354 1.613059252717314 1.1314927235895988 1.8179469732043663 1.0 15.856835251087073 -6.005627800454487 24.981564730913377 1.3931145316392142 1.692580708077281 0.20958735454902921 0.3028665870104639 455.47121201077846 2021829.4827654685 0.09613636652897047 0.1057210070405373 9.871251102930072e-07 6.005627800454487 0.29946617643806683 S(ph)PPPPPPPPSDEALLHCVLEGK ddPTM_KYSE-520_SHP099_60min_R1 6 SPPPPPPPPSDEALLHCVLEGK 22 0 Q9BRK4 Q9BRK4 LZTS2 Leucine zipper putative tumor suppressor 2 1 S(1)PPPPPPPPSDEALLHCVLEGK;S(1)PPPPPPPPSDEALLHCVLEGK;S(1)PPPPPPPPSDEALLHCVLEGK;S(1)PPPPPPPPSDEALLHCVLEGK;S(1)PPPPPPPPSDEALLHCVLEGK;S(1)PPPPPPPPSDEALLHCVLEGK 252.8 1.0162000000000002e-27 1486156000.0 730573.0 696638.0 616920.0 683866.0 633716.0 704385.0 732996.0 720998.0 855952.0 762524.0 True False 690046.6593288317 663170.4648050441 656687.650306901 748860.4190281896 683585.8438491907 699988.671936651 807094.3890315773 718497.0262201981 700532.6935939944 755768.6305946946 0.9130395618376645 0.8774781566194572 0.8689003799882122 0.9908593565717736 0.9044908933456194 0.9261943981266438 1.0679119989360972 0.9506838430894274 0.9269142237919605 1.0 19.527585112875016 -5.642921946013383 0.9057047308107634 0.9768191814405826 0.8848320055406109 0.33617411671462716 0.04744222370031023 0.7543771169525643 1.304296928318016 0.02338514229938516 0.04396870428073906 2.275506361556771e-06 5.642921946013383 -0.09198717589997163 S(ph)PPPSLAK ddPTM_KYSE-520_SHP099_60min_R1 1 SPPPSLAK 8 0 F8VNV8;P54284-5;P54284-2;P54284-3;P54284-4;P54284 F8VNV8 CACNB3 Voltage-dependent L-type calcium channel subunit beta-3 1 S(0.5)PPPS(0.5)LAK 57.96 0.043352 8243400.0 18259.0 26127.0 33727.0 50433.0 42042.0 20559.0 32525.0 34512.0 42499.0 21504.0 True False 17246.136871585888 24871.819702573488 35901.096385108 55226.13715676567 45350.46621374189 20430.683655026158 35812.94441341026 34392.285927161334 34782.252912606265 21313.491289858834 0.8091652670621714 1.166951925628803 1.6844305748345458 2.5911351831430265 2.1277821449796956 0.9585798674263787 1.680294604312453 1.6136392418977137 1.6319359620427836 1.0 14.379479314951023 -10.089924431953092 3.4740440175706597 0.9996220998850406 1.6063105195145795 0.10825221469122381 0.5002130110340645 212887688.09634244 348557543.7723451 1016778.1335094818 0.13891739758257163 8.129719624900137e-11 10.089924431953092 0.6066884196295389 S(ph)PPPTVDESADNAFHLGPLR ddPTM_KYSE-520_SHP099_60min_R1 5 SPPPTVDESADNAFHLGPLR 20 0 Q96JK2-2;Q96JK2-3;Q96JK2 Q96JK2-2 DCAF5 DDB1- and CUL4-associated factor 5 1 S(0.998)PPPT(0.002)VDESADNAFHLGPLR;S(0.999)PPPT(0.001)VDESADNAFHLGPLR;S(0.999)PPPT(0.001)VDESADNAFHLGPLR;S(1)PPPTVDESADNAFHLGPLR;S(0.997)PPPT(0.003)VDESADNAFHLGPLR 217.71 5.305399999999999e-19 917060000.0 167437.0 237764.0 327978.0 132231.0 163444.0 218991.0 140398.5 168144.0 193394.0 224772.0 True False 158148.93583261553 226341.4605489601 349119.9866633542 144798.19448330032 176306.11293085074 217624.19593841315 154591.3505373154 167560.7477091046 158278.52466600548 222780.69494996988 0.7098861769334691 1.0159832771856192 1.5671016141760241 0.6499584468744827 0.7913886477930415 0.9768539234841926 0.6939171752383309 0.7521331583364255 0.7104678648280107 1.0 17.765264695864154 S(ph)PPPVSK ddPTM_KYSE-520_SHP099_60min_R1 5 SPPPVSK 7 0 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(1)PPPVSK;S(1)PPPVSK;S(1)PPPVSK;S(1)PPPVSK;S(1)PPPVSK 98.23299999999999 0.0056143 45633600000.0 22252400.0 16938900.0 15840630.0 17053300.0 18084200.0 17676600.0 18487900.0 18049500.0 19072800.0 18525000.0 True False 21018015.012940347 16125129.818192739 16861742.355704144 18674040.50473839 19507323.65497721 17566273.782598164 20356837.35651613 17986890.49728495 15609660.306161469 18360882.91223192 1.1447170113447138 0.8782328113126993 0.9183513906333417 1.0170556935635078 1.062439303612221 0.956722716797873 1.1087068881069178 0.9796310222806432 0.8501584798932735 1.0 24.13013209891491 -8.972329263146595 0.0038611183675872373 0.15746972530198647 1.8044963709991146 0.014727508700361769 0.09014641563004921 229071.26245219092 272.90621995478114 59004.47403974243 57405.390558575076 1.065787781003727e-09 8.972329263146595 1.647026645697128 S(ph)PPQSPGPGK ddPTM_KYSE-520_SHP099_60min_R1 1 SPPQSPGPGK 10 0 H0YBI6;H0YBQ0;Q86VQ6 H0YBI6 TXNRD3 Thioredoxin reductase 3 1 S(0.998)PPQS(0.002)PGPGK 85.29 0.0061896 0.0 414310.0 318290.0 320290.0 302900.0 316890.0 355220.0 330550.0 325010.0 396450.0 325380.0 True False 391327.398393491 302998.87063697015 340936.4058821197 331687.5249297944 341827.4401425399 353002.9402178314 363965.2198571182 323882.61616790394 324464.6736912101 322497.3863418095 1.2134281236584339 0.9395389961884119 1.0571757177615293 1.0284967847095803 1.0599386370847756 1.0945916313370974 1.1285834715924103 1.0042953210933196 1.0061001652500696 1.0 18.29892794279599 -7.388720133404045 15.514647060015866 1.0037680413570294 1.0671146350785097 0.1889429121992916 0.06624035279834416 2.3122369151792763 275.8863646988738 0.03515379696419269 0.016885397077609186 4.0858259894471346e-08 7.388720133404045 0.06334659372148033 S(ph)PPRPPR ddPTM_KYSE-520_SHP099_60min_R1 4 SPPRPPR 7 1 P21127;P21127-6;A0A0D9SEN2;A0A0D9SER5;A0A0D9SEI3;P21127-9;P21127-2;P21127-8;P21127-3;P21127-10;Q9UQ88-9;E7ESP2;J3KS35;Q9UKB5;Q5QPR4;Q5QPR3;Q9UQ88-4;Q9UQ88-3;Q9UQ88-2;Q9UQ88 P21127;Q5QPR4 CDK11B;CDK11A;AJAP1 Cyclin-dependent kinase 11B;Cyclin-dependent kinase 11A;Adherens junction-associated protein 1 1 S(1)PPRPPR;S(1)PPRPPR;S(1)PPRPPR;S(1)PPRPPR 88.819 0.0050853 35614740000.0 315801.0 325738.0 292293.0 230362.0 336811.0 294008.0 218698.0 251447.0 323227.0 280693.0 True False 298282.888996314 310089.0575372937 311134.67446533515 252255.53521913927 363316.109507555 292172.9870152696 240806.12812679462 250574.7890451709 264537.12468959216 278206.2783958492 1.0721644770787615 1.1146012208109828 1.1183596439999581 0.9067212166226327 1.3059234737708048 1.0502027082205085 0.8655668359294202 0.9006798498222154 0.9508668395800625 1.0 18.085795452578466 -6.612494823530347 5.87521416814774 0.9226841553777262 1.1018623893636672 0.4240648056900109 0.0958096283665518 0.19705563274627255 10.375053136730422 0.036390809437341146 0.028000891058314416 2.4406481585931156e-07 6.612494823530347 0.17917823398594102 S(ph)PPSLR ddPTM_KYSE-520_SHP099_60min_R1 1 SPPSLR 6 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.998)PPS(0.002)LR 79.469 0.034291 1477100000.0 257430.0 219550.0 235920.0 219230.0 228260.0 220290.0 214740.0 217030.0 270270.0 241940.0 True False 243149.84472601773 209002.48844873154 251127.78068534628 240065.553286097 246222.763378258 218915.0883975737 236448.01486043737 216277.17358518258 221195.78095225984 239796.59982647168 1.0139837049481628 0.8715823685572514 1.0472533007852254 1.0011215899634105 1.0267983931233247 0.9129199019335186 0.9860357279108315 0.9019192671693056 0.9224308481118069 1.0 17.871451676774164 -6.268512008859392 24.929839195315306 0.9411170159134871 0.9890097407325331 0.1670781131127872 0.05248379762327706 1043.827003801695 3679304.1338295615 0.018244553267167278 0.016438181050010953 5.38874944509521e-07 6.268512008859392 0.04789272481904605 S(ph)PPSSSEIFTPAHEENVR ddPTM_KYSE-520_SHP099_60min_R1 5 SPPSSSEIFTPAHEENVR 18 0 I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L3A7 FAM195B Protein FAM195B 1 S(0.808)PPS(0.034)S(0.102)S(0.056)EIFTPAHEENVR;S(0.647)PPS(0.118)S(0.118)S(0.118)EIFTPAHEENVR;S(0.916)PPS(0.028)S(0.028)S(0.028)EIFTPAHEENVR;S(0.978)PPS(0.021)SSEIFTPAHEENVR;S(0.982)PPS(0.017)SSEIFTPAHEENVR 207.07 4.2932999999999996e-14 3914350000.0 1774578.0 1689066.0 1825833.0 1820632.0 1900928.0 1839250.0 1795650.0 1854509.0 2202249.0 1855520.0 True False 1676138.6208064607 1607920.7340202478 1943529.1166160905 1993664.3178870287 2050520.218799197 1827770.558514852 1977171.825855191 1848076.1411246525 1802376.095779527 1839081.5363727172 0.9113998415276169 0.8743063873022207 1.0567933385103625 1.0840543382427732 1.11496971626582 0.9938496593902116 1.075086550950228 1.0048908134707695 0.9800414283612539 1.0 20.810554012920083 -4.762522897730774 24.999999542663314 1.0429253178873894 0.892853077146335 0.6475610645838297 0.04295188178669729 16.022560283892016 369729.9378954943 0.011606664732866962 0.026589418671916776 1.7277348850580578e-05 4.762522897730774 -0.1500722407410544 S(ph)PPSTGSTYGSSQK ddPTM_KYSE-520_SHP099_60min_R1 12 SPPSTGSTYGSSQK 14 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.843)PPS(0.065)T(0.09)GS(0.002)TYGSSQK;S(0.914)PPS(0.018)T(0.038)GS(0.011)T(0.011)Y(0.008)GSSQK;S(1)PPSTGSTYGSSQK;S(0.893)PPS(0.102)T(0.002)GS(0.003)TYGSSQK;S(1)PPSTGSTYGSSQK;S(1)PPSTGSTYGSSQK;S(0.999)PPS(0.001)TGSTYGSSQK;S(0.972)PPS(0.021)T(0.005)GS(0.001)TYGSSQK;S(1)PPSTGSTYGSSQK;S(0.885)PPS(0.008)T(0.083)GS(0.024)TYGSSQK;S(0.988)PPS(0.012)TGSTYGSSQK;S(1)PPSTGSTYGSSQK 206.67 5.788999999999999e-12 53770380000.0 6628640.0 5207970.0 4745950.0 5634060.0 5289900.0 6323840.0 6448500.0 6816040.0 5802300.0 6506940.0 True False 6260936.125333768 4957771.303877663 5051881.53078848 6169519.368458097 5706185.034586199 6284370.568850653 7100377.3112951955 6792396.7481157 4748748.584079986 6449293.573922717 0.9707940960618447 0.7687309078197457 0.7833232388761805 0.9566194030000638 0.8847767541019954 0.9744277410879668 1.1009542719539225 1.0532001172314898 0.7363207349222294 1.0 22.62070971230761 -5.725801419779233 1.5923274567118684 0.9792659996981118 0.8403635131861157 0.17886828158370727 0.10730548143052765 0.5889879054302478 3.0956983119961046 0.03950736243391791 0.05516415467715419 1.8801763268782803e-06 5.725801419779233 -0.1389024865119961 S(ph)PPSTGSTYGSSQKEESAASGGAAYTK ddPTM_KYSE-520_SHP099_60min_R1 8 SPPSTGSTYGSSQKEESAASGGAAYTK 27 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.927)PPS(0.058)T(0.014)GS(0.001)TYGSSQKEESAASGGAAYTK;S(0.892)PPS(0.091)T(0.016)GSTYGS(0.001)SQKEESAASGGAAYTK;S(0.479)PPS(0.237)T(0.282)GS(0.001)TYGSSQKEESAASGGAAYTK;S(0.896)PPS(0.043)T(0.043)GS(0.012)T(0.003)YGS(0.001)SQKEESAASGGAAYTK;S(0.786)PPS(0.031)T(0.031)GS(0.031)T(0.031)Y(0.029)GS(0.029)S(0.029)QKEES(0.002)AASGGAAYTK;S(0.73)PPS(0.188)T(0.052)GS(0.015)T(0.005)Y(0.001)GS(0.005)S(0.005)QKEESAASGGAAYTK;S(0.974)PPS(0.024)T(0.001)GS(0.001)TYGSSQKEESAASGGAAYTK;S(0.963)PPS(0.031)T(0.006)GSTYGSSQKEESAASGGAAYTK 178.33 7.802299999999999e-11 21667378000.0 5029294.0 4334522.0 3746504.0 3862813.1 3557601.3 4105264.0 4067074.0 4195114.0 5138446.0 4115462.0 True False 4750309.036170971 4126285.0568698393 3988009.642458346 4229933.695626893 3837564.282327533 4079641.524605644 4478213.530737159 4180562.1286809687 4205433.736082493 4079002.208460987 1.1645762354130396 1.0115917682787163 0.9776924450264094 1.0370020606639614 0.9408095622913258 1.0001567334637207 1.097869847054286 1.024898226338127 1.0309956997226557 1.0 21.959784857561463 -4.260916370959102 24.26517415219395 1.0137961810582414 1.1645762996929476 0.5775072666396284 0.038778509717528976 21.9824521363743 1019454.5433548054 0.010152841056913478 0.05847789588092616 5.483825529345271e-05 4.260916370959102 0.1507801186347062 S(ph)PPSTGSTYGSSQKEESAASGGAAYTKR ddPTM_KYSE-520_SHP099_60min_R1 3 SPPSTGSTYGSSQKEESAASGGAAYTKR 28 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.656)PPS(0.257)T(0.063)GS(0.004)T(0.02)YGSSQKEESAASGGAAYTKR;S(0.993)PPS(0.006)T(0.001)GSTYGSSQKEESAASGGAAYTKR;S(0.997)PPS(0.003)TGSTYGSSQKEESAASGGAAYTKR 166.56 2.6085e-10 3380960000.0 1888270.0 2174090.0 2081560.0 1397430.0 1315800.0 1316690.0 922550.0 1042150.0 2366250.0 1227590.0 True False 1783523.8989270758 2069643.4530243804 2215740.6882137554 1530241.3270473504 1419345.9741221054 1308472.0493086427 1015810.3572203426 1038535.024889639 1936598.648308304 1216714.5076505668 1.465852414607103 1.70100992468709 1.8210851225011473 1.2576831437657408 1.1665398622252092 1.0754141921388416 0.8348797937667702 0.8535568684021151 1.5916623300956674 1.0 20.214559260206588 -5.472636838984558 3.0834269513256096 1.0683985900469533 1.6649015308600847 0.5861225742704347 0.2148390404787579 0.17772333890751232 3.357497885491746 0.0654927128918201 0.09805753576294961 3.367930811106303e-06 5.472636838984558 0.5965029408131315 S(ph)PPSVQSLAMR ddPTM_KYSE-520_SHP099_60min_R1 3 SPPSVQSLAMR 11 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7-2;Q96KQ7;Q96KQ7-3 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 S(1)PPSVQSLAMR;S(1)PPSVQSLAMR;S(1)PPSVQSLAMR 144.51 7.865e-05 3235580000.0 73858.0 88104.0 80909.0 76221.0 79374.0 92957.0 97157.7 80812.0 92092.0 96079.0 True False 69760.94950772726 83871.35159319986 86124.52359897718 83465.02092332068 85620.28222371788 92376.82088235166 106979.34848377542 80531.68203366268 75370.41425039957 95227.814808331 0.7325690466397663 0.8807442632387525 0.9044051233594261 0.876477330613059 0.8991100173415656 0.9700613320623008 1.1234044244226042 0.8456739472154451 0.7914747849890366 1.0 16.539095407126744 -3.3091780331826737 0.8426792425296247 0.9349315466479279 1.331070704994088e-15 0.320331476741363 0.08586143408667314 13.406726615364812 2.2339347004011874 0.032039070015756226 16.96849300793856 0.0004907066763126685 3.3091780331826737 -0.9349315466479265 S(ph)PPTQVAISSDSAR ddPTM_KYSE-520_SHP099_60min_R1 3 SPPTQVAISSDSAR 14 0 Q6ZUT6-4;Q6ZUT6;H0YM82;Q6ZUT6-3 Q6ZUT6-4 C15orf52 Uncharacterized protein C15orf52 1 S(0.993)PPT(0.006)QVAIS(0.001)S(0.001)DSAR;S(0.995)PPT(0.005)QVAISSDSAR;S(0.999)PPT(0.001)QVAISSDSAR 138.05 6.644299999999999e-06 1263890000.0 1239907.0 1234627.0 1236026.0 1163569.0 1155771.0 1170092.0 1092367.0 1113182.0 1457344.0 1096209.0 True False 1171126.8870166733 1175313.6657070906 1315702.2136715252 1274154.2479202226 1246723.602262563 1162789.0218044114 1202794.116834549 1109320.6314606331 1192727.0662526006 1086497.4410976977 1.0778919882530729 1.0817454521748906 1.2109574895475685 1.1727172101141201 1.147470352993181 1.0702179110791423 1.1070381496889268 1.0210062071935273 1.0977725497885924 1.0 20.05125334603388 -6.7564703973464795 1.2839926387752323 1.0438524884371079 1.1395433062134843 0.42207727732798894 0.046763187713581615 0.4821119081551379 1.5998612684669538 0.031449206532910556 0.018226600623357837 1.7519818498270127e-07 6.7564703973464795 0.09569081777637645 S(ph)PPTTMLLPAS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 1 SPPTTMLLPASPAK 14 0 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 2 S(1)PPTTMLLPAS(1)PAK 135.09 0.00033333 0.0 331710.0 300100.0 279670.0 305690.0 295300.0 332570.0 336810.0 345800.0 332120.0 300980.0 True False 313309.3850525085 285682.7455407163 297697.9756878214 334742.68569095 318538.42997283634 330494.30726942257 370858.04174883105 344600.5005103264 271815.3800638791 298313.55135889683 1.0502686975677158 0.9576592958628801 0.9979364810338943 1.1221169275284641 1.067797384737669 1.107875608613601 1.2431820145597643 1.1551620733975387 0.9111734241561888 1.0 18.186469990273583 -5.252948787361062 23.078667866583928 1.099830807990648 0.9975252401793092 0.15563093424972307 0.08667628493415482 348.9569520117616 948506.2745825645 0.0240472884789022 0.040692903903733375 5.5853605424004595e-06 5.252948787361062 -0.10230556781133882 S(ph)PPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK ddPTM_KYSE-520_SHP099_60min_R1 4 SPPVQPHTPVTISLGTAPSLQNNQPVEFNHAINYVNK 37 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 S(0.953)PPVQPHT(0.022)PVT(0.016)IS(0.008)LGT(0.001)APSLQNNQPVEFNHAINYVNK;S(0.899)PPVQPHT(0.053)PVT(0.041)IS(0.006)LGTAPSLQNNQPVEFNHAINYVNK;S(0.987)PPVQPHT(0.013)PVTISLGTAPSLQNNQPVEFNHAINYVNK;S(0.999)PPVQPHT(0.001)PVTISLGTAPSLQNNQPVEFNHAINYVNK 247.58 3.3534999999999994e-31 7962460000.0 1143910.0 1361470.0 1340400.0 1453640.0 1148560.0 1300060.0 1006510.0 1115870.0 1420820.0 1061990.0 True False 1080455.0319719492 1296062.9375918666 1426804.328715827 1591793.508547199 1238945.1375875396 1291945.8433072285 1108257.8533909775 1111999.3074160167 1162834.9039574862 1052581.5948157173 1.0264810227478012 1.2313182597675738 1.3555284794483107 1.5122756434154496 1.177053773018376 1.2274068344634301 1.0528949573595838 1.0564495074709168 1.1047456175224797 1.0 20.00550064287548 -6.618121469372348 2.0869270896484333 1.0537209043607576 1.2785757532856452 0.401954203115349 0.11951625366886406 0.34881782236496317 3.0920779188767815 0.059182698057804 0.042459950789496353 2.4092314878963127e-07 6.618121469372348 0.2248548489248876 S(ph)PPYTAFLGNLPYDVTEESIK ddPTM_KYSE-520_SHP099_60min_R1 3 SPPYTAFLGNLPYDVTEESIK 21 0 E7EX17;P23588-2;P23588;F8VX11;F8VP89;F8W0K0;F8VSC7;F8VRU1;F8VYE9 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.559)PPY(0.431)T(0.01)AFLGNLPYDVTEESIK;S(0.5)PPY(0.42)T(0.08)AFLGNLPYDVTEESIK;S(0.433)PPY(0.337)T(0.23)AFLGNLPYDVTEESIK 170.53 2.1078e-09 410390000.0 183965.0 174695.0 143418.0 145188.0 147031.0 185464.0 161870.0 183987.0 184673.0 177519.0 True False 173760.09472486452 166302.38997745918 152662.95375691346 158986.62386763626 158601.50320804646 184306.45038162213 178233.39929896165 183348.79203988874 151141.03842748597 175946.31976769192 0.9875744770012016 0.9451882267104765 0.8676677861661426 0.9036086920007866 0.9014198388318299 1.0475152343337921 1.012998734695272 1.0420723336638729 0.8590179017500494 1.0 17.424775812290072 -6.244769055326735 24.596754015433195 0.9962427325382458 0.9184912052709571 0.279347985253648 0.056952550763024364 855.4483767340807 1262198.37819564 0.01903107940002324 0.018976621246988505 5.691555100755829e-07 6.244769055326735 -0.07775152726728873 S(ph)PQDEGLHLLKPLSIPK ddPTM_KYSE-520_SHP099_60min_R1 1 SPQDEGLHLLKPLSIPK 17 1 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 S(1)PQDEGLHLLKPLSIPK 221.83 1.9916999999999996e-18 781600000.0 856330.0 719430.0 676590.0 804310.0 852640.0 780020.0 766850.0 893980.0 837950.0 841420.0 True False 808827.6678484657 684867.5029135547 720204.0739822759 880751.3805753808 919737.9171420217 775151.6058462729 844370.6817347793 890878.9920364995 685799.4030005039 833965.6734148548 0.9698572658710808 0.8212178567364948 0.8635895900046375 1.0561002792464487 1.102848650084066 0.9294766326199556 1.0124765426822893 1.068244198095829 0.8223352889242411 1.0 19.669628477035598 -5.250391129470212 24.32379293030832 1.0036454501500127 0.8785211843216562 0.2866410767168145 0.08190259919463992 601.90587458158 1325149.7081055152 0.021962967193958623 0.037559696431041366 5.618351035831068e-06 5.250391129470212 -0.12512426582835656 S(ph)PQEGPTWSR ddPTM_KYSE-520_SHP099_60min_R1 1 SPQEGPTWSR 10 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(1)PQEGPTWSR 102.33 0.0025043 379810000.0 484630.0 402630.0 431690.0 515940.0 403970.0 446500.0 443100.0 471680.0 524870.0 398430.0 True False 457746.60781404644 383287.0504400486 459517.42812842125 564974.7824769826 435760.1407251151 443713.22787923453 487892.87223926454 470043.8521709396 429566.83889596525 394900.220173849 1.1591449799965425 0.9705921416587515 1.163629202146622 1.4306773043283205 1.1034689738417418 1.123608459078337 1.2354839205318164 1.1902851104109533 1.0877857670143987 1.0 18.591128646599802 -10.272100380099538 4.554014680254399 0.999920061807115 1.165052137912795 0.15936012136103606 0.1120204597492021 9.47761148906801e-05 1.5148819382857462e-05 0.11306622687677993 0.027409332457050753 5.344408178254234e-11 10.272100380099538 0.16513207610567993 S(ph)PQFINLK ddPTM_KYSE-520_SHP099_60min_R1 2 SPQFINLK 8 0 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 S(1)PQFINLK;S(1)PQFINLK 69.65 0.023449 1953850000.0 2349580.0 2244400.0 1986990.0 2252800.0 2403100.0 1865640.0 1823120.0 2109500.0 2367100.0 1908970.0 True False 2219244.113628393 2136575.655086916 2115074.554696407 2466905.4346709847 2592210.2982313684 1853995.8487359816 2007418.7615365584 2102182.636861001 1937294.3097350593 1892058.0109561854 1.1729260417902612 1.1292336930024462 1.1178698234667321 1.3038212466986094 1.3700480023449961 0.979883194912735 1.0609710431246626 1.1110561223218656 1.0239085157626922 1.0 20.85152489205845 -6.282994965349136 24.995213009215878 1.043717733808007 1.212923417447999 0.5754022098892474 0.07861307243490806 725.1211811874066 840826.2101111101 0.03060891200837892 0.027016441882487734 5.212007532002986e-07 6.282994965349136 0.169205683639992 S(ph)PQGQLDTSESKPDSFFLEPLMPAVLKPAK ddPTM_KYSE-520_SHP099_60min_R1 3 SPQGQLDTSESKPDSFFLEPLMPAVLKPAK 30 2 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 S(0.288)PQGQLDT(0.237)S(0.237)ES(0.237)KPDS(0.001)FFLEPLMPAVLKPAK;S(0.621)PQGQLDT(0.126)S(0.126)ES(0.126)KPDS(0.001)FFLEPLMPAVLKPAK;S(0.999)PQGQLDTSESKPDSFFLEPLMPAVLKPAK 134.73 1.8463999999999998e-06 426500000.0 450840.0 427990.0 468750.0 421810.0 439690.0 407220.0 412940.0 429890.0 560710.0 407260.0 True False 425831.00647274125 407428.71797391266 498966.3750265183 461898.6955781996 474291.1015061163 404678.38892941125 454684.00510603044 428398.81192708027 458899.198348842 403651.9932434854 1.0549458781338839 1.0093563881602068 1.2361300907178692 1.1442993056139312 1.1750000233989206 1.0025427737335777 1.1264257645614106 1.0613073119861134 1.1368684065237133 1.0 18.622752490217536 -6.246779778027422 24.728089725616574 1.0730728584570015 1.12494337390745 0.1397405246551695 0.07132445600643425 1701.0528072645861 2869368.8495947863 0.024370454675638874 0.024245041440082982 5.665264903722098e-07 6.246779778027422 0.05187051545044841 S(ph)PQHFHRPDQGINIYR ddPTM_KYSE-520_SHP099_60min_R1 4 SPQHFHRPDQGINIYR 16 1 J3QSX6;O14639-4;O14639-3;O14639-5;H0Y7N6;F6XFR5 J3QSX6 ABLIM1 Actin-binding LIM protein 1 1 S(1)PQHFHRPDQGINIYR;S(1)PQHFHRPDQGINIYR;S(1)PQHFHRPDQGINIYR;S(1)PQHFHRPDQGINIYR 281.55 2.1558e-37 13407700000.0 1277500.0 1207310.0 1112400.0 1384260.0 1044710.0 937924.0 853624.0 876600.0 1269450.0 986886.0 True False 1206634.5283668877 1149309.015390744 1184107.0839029292 1515819.6542070534 1126922.7334132118 932070.0684107569 939916.6444874066 873559.279199979 1038949.8802303113 978142.9578256909 1.233597316949569 1.1749908397291304 1.2105664866565875 1.5496913228068026 1.1521043262615136 0.952897591250517 0.9609195025814454 0.8930793522674944 1.0621656803007484 1.0 19.89968580819703 -6.084037496265513 4.394282866791369 0.9689896869252396 1.2855181989952662 0.674210670588935 0.10404070007675667 0.14023166464055115 4.859428978642542 0.03633742864703689 0.03698660480967623 8.240669633661647e-07 6.084037496265513 0.31652851207002664 S(ph)PQISMSDIDLNLK ddPTM_KYSE-520_SHP099_60min_R1 4 SPQISMSDIDLNLK 14 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(1)PQISMSDIDLNLK;S(1)PQISMSDIDLNLK;S(0.998)PQIS(0.002)MSDIDLNLK;S(1)PQISMSDIDLNLK 273.35 4.6978e-25 1028790000.0 983950.0 1035040.0 853585.0 953730.0 776920.0 1036760.0 1013990.0 1054540.0 1086970.0 1079740.0 True False 929368.3320443038 985315.1247732854 908608.4548842886 1044372.2124506198 838059.1839298881 1030289.1962734036 1116494.0047887445 1050882.0468714868 889603.6482838554 1070174.3436250074 0.868427034885035 0.9207052389573478 0.8490284412972883 0.9758897871845928 0.7831052845942145 0.9627302340135527 1.043282350618534 0.9819727534411153 0.8312698333530367 1.0 20.02941441659917 -6.477199954534625 24.9989961816937 0.9683972386881022 0.8841462927330028 0.27267357772428535 0.0685841115800706 589.8080065399445 322789.1535585142 0.02370515972510917 0.020905077192885438 3.332729344657776e-07 6.477199954534625 -0.08425094595509941 S(ph)PQISMSDIDLNLKGPK ddPTM_KYSE-520_SHP099_60min_R1 2 SPQISMSDIDLNLKGPK 17 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.998)PQIS(0.001)MS(0.001)DIDLNLKGPK;S(1)PQISMSDIDLNLKGPK 172.0 1.5387e-08 1001000000.0 752250.0 839000.0 724780.0 736980.0 654100.0 741280.0 656720.0 609580.0 975250.0 648570.0 True False 710521.1929268031 798693.1806353247 771500.4784890021 807022.3576188841 705573.9486800955 736653.3965561463 723107.6665695563 607465.5092570412 798169.1840518416 642824.1743798252 1.1053118741408405 1.2424753337969539 1.2001734054779745 1.2554324958258944 1.0976157661786896 1.1459640534938567 1.1248918372853445 0.9449948111287244 1.2416601861961523 1.0 19.294064659209145 -6.334048708659745 1.2240948077402238 1.0717593107349976 1.199724383561982 0.2632989315043148 0.08518511024443513 0.5922250188750532 1.8152334536087393 0.04214233524967276 0.03559830213675113 4.6339494437529394e-07 6.334048708659745 0.12796507282698433 S(ph)PQKPIVR ddPTM_KYSE-520_SHP099_60min_R1 2 SPQKPIVR 8 1 H7C560;A0A2U3TZI2;A0A2R8Y8E0;P15056;A0A2R8YDP5;A0A2R8YES9;H7C5K3;A0A2R8Y467 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(1)PQKPIVR;S(1)PQKPIVR 81.771 0.0059343 4524100000.0 2898100.0 2728580.0 2654170.0 2972290.0 3301400.0 3542900.0 3479800.0 4043900.0 4058000.0 3413700.0 True False 2737336.615780881 2597494.9211179186 2825262.045022152 3254775.5479484266 3561201.3976035244 3520787.4469279763 3831572.1435752492 4029872.6547533562 3321169.4938552906 3383457.27381841 0.8090353724761692 0.7677043659506623 0.8350222321068931 0.9619673855893681 1.0525332845668007 1.040588712076326 1.1324428930208177 1.1910517345488547 0.9815904931192394 1.0 21.690066739683537 -5.432010929253925 1.4992565832037303 1.084772193364261 0.7812963800638789 0.8010020605768028 0.05861986084355028 0.16372525245623448 0.7325844660754798 0.01994387182112587 0.037782231244903396 3.698188729725688e-06 5.432010929253925 -0.303475813300382 S(ph)PQLSDFGLER ddPTM_KYSE-520_SHP099_60min_R1 13 SPQLSDFGLER 11 0 Q8IX90-3;Q8IX90 Q8IX90-3 SKA3 Spindle and kinetochore-associated protein 3 1 S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(0.999)PQLS(0.001)DFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER;S(1)PQLSDFGLER 212.55 1.2540999999999998e-09 29360780000.0 7146291.0 6692248.0 6507000.0 5895770.0 6520604.0 6471292.0 6354556.0 6616705.0 7932447.0 6519113.0 True False 6749871.992452082 6370742.360810961 6926451.631568116 6456102.208172114 7033738.437638318 6430902.266224119 6996936.534970109 6593753.1947055645 6492114.585516011 6461358.730613165 1.0446521039718744 0.9859756479124314 1.071980665421252 0.9991864679457981 1.0885850377434216 0.9952863684468181 1.0828893467591327 1.0204901893877414 1.0047599670882115 1.0 22.62340614411932 -7.519866324718832 21.083705419026074 1.005794832805786 1.0375021553775858 0.14893622104413617 0.03442273087471302 32.6426436684867 228559.9078166492 0.0204278997323439 0.008134647296228528 3.0208814007148326e-08 7.519866324718832 0.03170732257179987 S(ph)PQMVSAIVR ddPTM_KYSE-520_SHP099_60min_R1 9 SPQMVSAIVR 10 0 A0A2R8Y804;A0A2R8Y543;A0A2R8Y5C3;A0A2R8Y750;A0A2R8Y5Z1;B4DGU4;A0A2R8YCH5;A0A2R8Y5A3;P35222;A0A2R8Y7Z0 A0A2R8Y804 CTNNB1 Catenin beta-1 1 S(1)PQMVSAIVR;S(1)PQMVSAIVR;S(1)PQMVSAIVR;S(1)PQMVSAIVR;S(1)PQMVSAIVR;S(1)PQMVSAIVR;S(1)PQMVSAIVR;S(1)PQMVSAIVR;S(1)PQMVSAIVR 142.29 0.00022554 17000090000.0 1078259.0 1181645.0 912370.0 1540653.0 1177555.0 1085734.0 1118977.0 1129400.0 1484919.0 988679.0 True False 1018445.8238139744 1124877.0005146954 971182.8300436151 1687076.1979057863 1270221.8791285574 1078957.5313734217 1232094.1153231242 1125482.3750039425 1215295.1413617828 979920.0732406221 1.0393151968465617 1.1479272965546026 0.9910837185239887 1.7216467383167078 1.2962504941121367 1.1010668735515132 1.2573414393365325 1.1485450760100688 1.240198231007524 1.0 19.902304555662756 -10.296227407252406 3.3015275708211607 0.9989555074108138 1.2204113777060217 0.10176623872054547 0.1920397426395221 120148668.21758303 169430543.93036595 1242931.7605445094 0.05105067814041038 5.055598691244587e-11 10.296227407252406 0.22145587029520786 S(ph)PQNQYPAELMR ddPTM_KYSE-520_SHP099_60min_R1 3 SPQNQYPAELMR 12 0 P33993;P33993-2;C9J8M6 P33993 MCM7 DNA replication licensing factor MCM7 1 S(1)PQNQYPAELMR;S(1)PQNQYPAELMR;S(1)PQNQYPAELMR 207.06 3.3547e-09 749350000.0 653140.0 626310.0 520830.0 501070.0 599200.0 557280.0 560770.0 610400.0 626030.0 565020.0 True False 616909.0221976892 596221.1274895245 554403.5351574644 548691.5421478113 646353.6310183656 553801.8088074803 617458.104187797 608282.6648684306 512358.73293204274 560014.3623789081 1.101595001201569 1.0646532795280683 0.9899809226363245 0.9797811967125305 1.1541733113284691 0.9889064388544657 1.1025754796089002 1.0861911867482854 0.9149028441977326 1.0 19.095104302084053 -7.757021721506739 24.9999405236433 0.9574514124436404 1.0561213725235532 0.32939509953377644 0.05758299406144034 120.38166549403388 681282.8129054812 0.04161432991828081 0.01451038309967453 1.749759171150434e-08 7.757021721506739 0.0986699600799128 S(ph)PQPDPVGT(ph)PTIFKPQSK ddPTM_KYSE-520_SHP099_60min_R1 6 SPQPDPVGTPTIFKPQSK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 2 S(1)PQPDPVGT(0.993)PT(0.007)IFKPQSK;S(1)PQPDPVGT(0.915)PT(0.085)IFKPQSK;S(1)PQPDPVGT(0.908)PT(0.092)IFKPQSK;S(1)PQPDPVGT(0.927)PT(0.073)IFKPQSK;S(1)PQPDPVGT(0.932)PT(0.068)IFKPQSK;S(1)PQPDPVGT(0.887)PT(0.113)IFKPQSK 158.77 2.7174e-08 5599250000.0 4926360.0 4117310.0 4144400.0 4490830.0 3972180.0 3749910.0 4213040.0 4660970.0 4810710.0 4683980.0 True False 4653084.990344815 3919508.247391692 4411554.6552744545 4917637.132982729 4284767.967387405 3726505.4207315105 4638935.198508038 4644802.182948573 3937206.3321302608 4642483.581281296 1.0022835641479195 0.8442697058090473 0.9502574598350854 1.0592686106227418 0.9229473604739893 0.802696521266537 0.999235671443715 1.0004994313122884 0.8480819077110482 1.0 22.146465377224033 -10.652409645617967 6.305369345159867 1.0004033335805407 0.937288101724427 0.05501740677124811 0.0787627767017624 0.00045166893585137866 2.4898684450596553e-05 0.07713102971277523 0.018588093431687845 2.226334182441886e-11 10.652409645617967 -0.06311523185611367 S(ph)PQPDPVGTPTIFKPQSK ddPTM_KYSE-520_SHP099_60min_R1 4 SPQPDPVGTPTIFKPQSK 18 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(1)PQPDPVGTPTIFKPQSK;S(1)PQPDPVGTPTIFKPQSK;S(1)PQPDPVGTPTIFKPQSK;S(1)PQPDPVGTPTIFKPQSK 142.42 4.1964e-06 1260200000.0 1187806.0 989559.0 983944.0 1025302.0 1080169.0 1179738.0 1188171.0 1527983.0 1530950.0 1222456.0 True False 1121916.033347442 942019.100281659 1047370.604606064 1122746.3938117127 1165172.1549791016 1172374.8175404086 1308282.920111485 1522682.7836069122 1252968.0721088627 1211625.9908963765 0.9259590350298066 0.7774834044165239 0.8644339197702468 0.9266443624084776 0.9616599212411184 0.9676045465755242 1.07977455909773 1.2567267416246262 1.034121157455446 1.0 20.208513000519197 -6.2699526020392575 1.1020976544656307 1.114995598445451 0.8565874925134543 0.6086597082115499 0.07674020941224577 0.3040371010258621 0.7687499969919152 0.041220258024996556 0.03691188233650632 5.370904100577894e-07 6.2699526020392575 -0.2584081059319966 S(ph)PQPPSR ddPTM_KYSE-520_SHP099_60min_R1 1 SPQPPSR 7 0 E7ERS3;Q86VM9 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 S(1)PQPPSR 59.35 0.04481 364720000.0 127200.0 130140.0 117900.0 124380.0 114570.0 139150.0 110570.0 111470.0 123210.0 118110.0 True False 120143.96243308636 123887.87905587739 125500.02264666966 136201.03780378934 123586.00718587145 138281.5132349283 121747.49465920907 111083.33658729355 100838.16987134333 117063.63728818957 1.026313253340263 1.0582951454932823 1.0720666600996793 1.1634786083785091 1.055716446616339 1.1812507832342862 1.040011206549893 0.9489141048456098 0.861396179097852 1.0 16.836933484939824 -7.193371017530553 3.321841297968761 0.9254269791177934 1.0926712094579898 0.6102772023190197 0.05541199567524979 0.15832646853854582 3.42236071354346 0.029967068990439303 0.015295572512041848 6.40662025525692e-08 7.193371017530553 0.16724423034019642 S(ph)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK ddPTM_KYSE-520_SHP099_60min_R1 48 SPQPPVEEEDEHFDDTVVCLDTYNCDLHFK 30 0 A0A1W2PPS1;Q00839-2;Q00839;Q5RI18;A0A1W2PP35;A0A1W2PRI6 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK;S(1)PQPPVEEEDEHFDDTVVCLDTYNCDLHFK 319.35 7.6703e-65 37069487000.0 7311976.0 6490084.5 5437134.3 5739482.6 5663399.9 5544498.899999999 5652690.3 6252824.4 6515900.100000001 5448671.3 True False 6906366.115217212 6178291.098804563 5787620.676700461 6284961.300665634 6109077.251792473 5509893.625737667 6224119.400464978 6231134.811576591 5332776.894314601 5400400.311284126 1.2788618837730183 1.144043171372877 1.0717021596727263 1.1637954481880204 1.1312267424004787 1.0202750366902904 1.1525292648138867 1.1538283187186416 0.9874780732776003 1.0 22.364634922100084 -1.000000620550408 0.8926610261793783 1.0895865119900443 91.07716973793002 0.46656711243617166 0.0625624687216332 803.8055267461573 1.8240701510516386 0.02041092027339116 147294.54083836186 0.0999998571130902 1.000000620550408 89.98758322593997 S(ph)PQQSAALPR ddPTM_KYSE-520_SHP099_60min_R1 2 SPQQSAALPR 10 0 E5RJN3;A0A0A6YYG7;Q6IBW4-2;Q6IBW4;Q6IBW4-4 E5RJN3 NCAPH2 Condensin-2 complex subunit H2 1 S(1)PQQSAALPR;S(0.998)PQQS(0.002)AALPR 132.14 0.0003286 3050300000.0 1048170.0 934910.0 1145190.0 828800.0 846800.0 1083520.0 957020.0 1074290.0 1214900.0 1109150.0 True False 990025.9206249072 889995.5202714808 1219010.779768786 907568.9028121935 913438.3423670772 1076757.3497686645 1053764.9212151251 1070563.5387311706 994304.7851367178 1099323.7939056421 0.9005771785468002 0.8095845147766095 1.1088732787615956 0.8255701439771552 0.8309092802602253 0.9794724318148301 0.9585573668621717 0.973838230979889 0.9044694480815192 1.0 20.068184948386826 -6.298217013774571 24.882536212664665 0.9613380089468055 0.8983650200204595 0.1464707192200677 0.0820192680606952 1251.6344672391097 846810.7852215756 0.029116437259588374 0.025678863506368606 5.032490760679227e-07 6.298217013774571 -0.06297298892634606 S(ph)PQQTVPYVVPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 SPQQTVPYVVPLSPK 15 0 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 2 S(0.971)PQQT(0.027)VPY(0.002)VVPLS(1)PK;S(0.988)PQQT(0.011)VPY(0.001)VVPLS(1)PK;S(0.997)PQQT(0.003)VPYVVPLS(1)PK;S(1)PQQTVPYVVPLS(1)PK;S(1)PQQTVPYVVPLS(1)PK;S(1)PQQTVPYVVPLS(1)PK;S(1)PQQTVPYVVPLS(1)PK;S(0.94)PQQT(0.06)VPY(0.001)VVPLS(0.999)PK;S(0.979)PQQT(0.022)VPY(0.001)VVPLS(0.999)PK;S(1)PQQTVPYVVPLS(1)PK 255.82 6.1005e-20 11783680000.0 10210740.0 8816550.0 8753000.0 8528860.0 8977480.0 8719770.0 8847740.0 9016120.0 11248010.0 9037090.0 True False 9644329.897594452 8392989.704088656 9317232.385295166 9339440.290104745 9683956.601126086 8665346.680995546 9742155.904821118 8984845.18409823 9205654.923257584 8957028.413349621 1.0767332035276869 0.9370283666377214 1.0402146733629531 1.0426940564557297 1.0811572939405938 0.9674354351807849 1.0876549068775239 1.0031055802733808 1.0277577002588725 1.0 23.094588752010047 S(ph)PQQTVPYVVPLSPK ddPTM_KYSE-520_SHP099_60min_R1 1 SPQQTVPYVVPLSPK 15 0 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 S(0.981)PQQT(0.019)VPYVVPLSPK 92.427 0.0020629000000000003 72669000.0 167940.0 156080.0 138710.0 115130.0 148050.0 146940.0 132210.0 131340.0 165470.0 155470.0 True False 158624.03341990995 148581.68251914368 147651.46854384706 126071.92058490327 159700.6927107292 146022.89295537453 145575.0770452568 130884.41219498654 135424.81915924983 154092.65675382965 1.02940683067928 0.9642359710658372 0.9581992526725482 0.8181565769633602 1.0363939208722883 0.9476304454186486 0.9447242984318189 0.8493877317209256 0.8788531654405662 1.0 17.23343858666421 -7.047422185587538 13.46272622140902 0.8978689215085575 0.9554771693577804 0.0915190395480866 0.06645189414464674 5.348893544634598 1515.3321122111195 0.03096242674522149 0.017903974134517872 8.965568115041634e-08 7.047422185587538 0.057608247849222916 S(ph)PQREPQR ddPTM_KYSE-520_SHP099_60min_R1 3 SPQREPQR 8 1 O96013;O96013-4;O96013-2;O96013-3 O96013 PAK4 Serine/threonine-protein kinase PAK 4 1 S(1)PQREPQR;S(1)PQREPQR;S(1)PQREPQR 106.49 0.0010567999999999999 2112000000.0 229430.0 242854.0 260304.0 258396.0 222694.0 213673.0 219369.0 224091.0 287558.0 222943.0 True False 216703.06054263416 231186.92930871402 277083.6123411261 282953.8781504099 240218.75084446583 212339.38754902504 241544.95935512392 223313.68062423237 235344.7159472747 220967.89846702965 0.9806992872992734 1.0462466761578453 1.253954145662789 1.280520293279746 1.0871205840802645 0.960951292120416 1.0931223993659176 1.0106159409284183 1.065062923528642 1.0 17.753477269002193 -5.999160743031974 24.998615355302178 1.030059318871242 1.1470064325021396 0.2696393985315363 0.08850654825090946 42.33098028041192 1260818.2465042209 0.03000806783697785 0.03375684428245864 1.001934328989067e-06 5.999160743031974 0.11694711363089771 S(ph)PQRPGWSR ddPTM_KYSE-520_SHP099_60min_R1 7 SPQRPGWSR 9 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(1)PQRPGWSR;S(1)PQRPGWSR;S(1)PQRPGWSR;S(1)PQRPGWSR;S(1)PQRPGWSR;S(1)PQRPGWSR;S(1)PQRPGWSR 98.40700000000001 0.0018198 31856160000.0 953788.0 989961.0 951655.0 882416.0 926262.0 953761.0 940891.0 1002926.0 1058568.0 966651.0 True False 900879.4783107609 942401.7875982439 1013000.2040018364 966280.551331956 999153.5496901426 947808.2238193216 1036005.4444912525 999447.0837906875 866358.7355277016 958087.224183099 0.9402896266348656 0.9836283835240272 1.0573152197761098 1.0085517549363452 1.04286282550324 0.9892713313523811 1.0813268545299615 1.0431692006360418 0.9042587289131128 1.0 19.869797479216736 -4.503692178439102 4.791919058746516 1.0197001526865923 0.9477104601386618 0.20237142191728041 0.04600212995007237 0.2678460101353842 16.171417788269924 0.011428649071069679 0.04193164853569654 3.13550733852573e-05 4.503692178439102 -0.07198969254793053 S(ph)PQSPGGNICHLGAPK ddPTM_KYSE-520_SHP099_60min_R1 1 SPQSPGGNICHLGAPK 16 0 Q9H609 Q9H609 ZNF576 Zinc finger protein 576 1 S(0.745)PQS(0.255)PGGNICHLGAPK 145.77 0.00065951 0.0 1287100.0 1061400.0 1185000.0 1056500.0 1097800.0 1232500.0 1122000.0 1110500.0 1398300.0 1381800.0 True False 1215701.9972297624 1010408.7508061193 1261386.9960670378 1156909.4423516926 1184190.6143724339 1224807.5103273396 1235422.7096647592 1106647.9346926487 1144403.9682744837 1369558.327024134 0.8876598924204413 0.7377624821584645 0.9210173609822533 0.8447317792338944 0.8646514653709716 0.8943083957502427 0.902059215213686 0.8080327159904506 0.835600752222886 1.0 20.38527927846099 -11.357182351246589 2.2838284814553673 1.9506465082962294 0.8547069282134561 0.4236231882877085 0.05070642635274513 1845504.8330256226 322028.95369005844 9126828.597712161 0.013639672181012434 4.3935709976854125e-12 11.357182351246589 -1.0959395800827734 S(ph)PQTLAPVGEDAMK ddPTM_KYSE-520_SHP099_60min_R1 7 SPQTLAPVGEDAMK 14 0 Q92797 Q92797 SYMPK Symplekin 1 S(0.935)PQT(0.065)LAPVGEDAMK;S(1)PQTLAPVGEDAMK;S(0.999)PQT(0.001)LAPVGEDAMK;S(1)PQTLAPVGEDAMK;S(0.999)PQT(0.001)LAPVGEDAMK;S(1)PQTLAPVGEDAMK;S(1)PQTLAPVGEDAMK 207.53 1.1462e-12 5318300000.0 7220600.0 7191280.0 5514650.0 5470630.0 6064870.0 6730340.0 6155860.0 6589200.0 7444500.0 6541780.0 True False 6820058.92409076 6845800.114468652 5870133.162751975 5990557.030395114 6542140.764610078 6688333.451567135 6778154.404204028 6566343.603130839 6092766.460573129 6483824.918627833 1.051857354213396 1.0558274167460746 0.9053503505141324 0.9239233177293891 1.0089940500729293 1.031541341030316 1.0453944221613072 1.0127268526739412 0.9396870731454817 1.0 22.628413703912255 S(ph)PQTPELVEALAFR ddPTM_KYSE-520_SHP099_60min_R1 1 SPQTPELVEALAFR 14 0 A0A0C4DG79;Q9NZB2-4;Q9NZB2;Q9NZB2-6 A0A0C4DG79 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 S(0.761)PQT(0.239)PELVEALAFR 94.53200000000001 0.053913 0.0 87407.0 108310.0 82155.0 78528.0 78671.0 97075.0 81137.0 86666.0 105870.0 94414.0 True False 82558.3594684653 103106.62502337548 87450.84275264763 85991.2775096958 84861.96012324077 96469.11891685698 89339.11978081075 86365.37587399651 86646.67676551493 93577.5654129804 0.8822452166191258 1.1018305997633198 0.9345278685837352 0.9189304843548294 0.9068622350744481 1.0309000719468973 0.9547066050130246 0.9229282199514942 0.9259342918692339 1.0 16.513875074455093 S(ph)PQVKPASTMGMGPLGK ddPTM_KYSE-520_SHP099_60min_R1 5 SPQVKPASTMGMGPLGK 17 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 S(1)PQVKPASTMGMGPLGK;S(1)PQVKPASTMGMGPLGK;S(0.994)PQVKPAS(0.003)T(0.003)MGMGPLGK;S(1)PQVKPASTMGMGPLGK;S(1)PQVKPASTMGMGPLGK 141.97 1.6807e-05 8170990000.0 8511960.0 7114830.0 6498490.0 6176280.0 6466410.0 7011700.0 6380570.0 7097410.0 7854950.0 7102000.0 True False 8039784.610628411 6773022.887222447 6917393.0633516265 6763271.794233706 6975279.678159995 6967937.379441939 7025580.283962282 7072790.7412579395 6428689.087175618 7039081.805272396 1.1421638266238747 0.9622026103105287 0.9827124126005152 0.960817331199063 0.9909360156796854 0.9898929394772529 0.998081920102136 1.00478882571876 0.9132851790925938 1.0 22.746955821855323 -4.257793533551331 24.98968211792716 0.9792306592836738 1.142163888797184 0.7837990263201358 0.025846838088049367 155.42991866506722 1065316.0260334827 0.0061864392806922405 0.04492791508629908 5.523399629186203e-05 4.257793533551331 0.16293322951351008 S(ph)PQVPAAQQMLNFPEK ddPTM_KYSE-520_SHP099_60min_R1 6 SPQVPAAQQMLNFPEK 16 0 Q92922 Q92922 SMARCC1 SWI/SNF complex subunit SMARCC1 1 S(1)PQVPAAQQMLNFPEK;S(1)PQVPAAQQMLNFPEK;S(1)PQVPAAQQMLNFPEK;S(1)PQVPAAQQMLNFPEK;S(1)PQVPAAQQMLNFPEK;S(1)PQVPAAQQMLNFPEK 202.61 1.0904e-12 1882938000.0 1416840.0 1414630.0 1186220.0 1094350.0 1239380.0 1358410.0 1161740.0 1404100.0 1581950.0 1382040.0 True False 1338245.0607994844 1346669.0513970794 1262685.639219108 1198356.6949716755 1336912.1548924258 1349931.6593133963 1279180.0166897846 1399229.5048194036 1294707.757714238 1369796.2008108487 0.9769665443715732 0.9831163574551607 0.9218054762246115 0.8748430564067196 0.9759934755995401 0.9854981774035483 0.9338469590823627 1.0214873599380199 0.945182762916 1.0 20.385529833348887 -5.92489435202564 24.999999785848708 0.9763914530999006 0.9391219467764893 0.20556882155369927 0.03641060106379407 67.30983331896502 22402.717036470407 0.011721064161389036 0.013290437242804714 1.1887913817591407e-06 5.92489435202564 -0.037269506323411306 S(ph)PRPAS(ph)PASNVVVLPSGSTVYVK ddPTM_KYSE-520_SHP099_60min_R1 2 SPRPASPASNVVVLPSGSTVYVK 23 1 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-2;Q7Z589-6;Q7Z589-4 Q7Z589 EMSY;C11orf30 Protein EMSY 2 S(1)PRPAS(0.803)PAS(0.197)NVVVLPSGSTVYVK;S(0.997)PRPAS(0.826)PAS(0.177)NVVVLPSGSTVYVK 118.23 0.00011362 1041150000.0 678880.0 656680.0 545510.0 565120.0 549920.0 535500.0 539450.0 602400.0 705530.0 538460.0 True False 641221.1730862712 625132.1071032244 580674.4474468606 618828.8348904761 593195.5753832097 532157.7458663605 593982.8705246481 600310.4150012163 577423.5369639547 533689.663315541 1.2014869636085734 1.1713401065697961 1.08803765064406 1.1595293621502971 1.1114990904976292 0.9971295725690779 1.112974283283915 1.1248305078119645 1.081946263258534 1.0 19.02564154342123 -1.0000000000000002 0.2083667755359317 1.0396963705831268 1.8138063357995124 0.519717202096196 0.044192652964393626 48.073973755490826 0.595148282425925 0.08000732984248751 12.308200955631088 0.09999999999999995 1.0000000000000002 0.7741099652163856 S(ph)PRPDHPGT(ph)PPHK ddPTM_KYSE-520_SHP099_60min_R1 2 SPRPDHPGTPPHK 13 1 P30291 P30291 WEE1 Wee1-like protein kinase 2 S(1)PRPDHPGT(1)PPHK;S(1)PRPDHPGT(1)PPHK 136.49 0.00021358 1072500000.0 1297270.0 1286210.0 1351280.0 1012350.0 1073080.0 1191720.0 884050.0 1019500.0 1238710.0 1113920.0 True False 1225307.8470563684 1224418.540959431 1438385.6709244426 1108563.4396258737 1157525.291009993 1184282.0334339119 973418.4014965522 1015963.5924530885 1013791.4893379725 1104051.535416645 1.1098284887525327 1.1090229954685604 1.3028247548078697 1.0040866789859824 1.048434111885156 1.0726691603096132 0.8816784092684634 0.920213921055493 0.9182465281889125 1.0 20.074376085783307 -6.096439835573154 1.0177499939956902 0.9271469846174025 1.1570477785981634 0.5697214820116728 0.07674258197481654 0.3742205096034223 0.8283571154685534 0.04074125200927901 0.04362261467446826 8.00866567840872e-07 6.096439835573154 0.2299007939807609 S(ph)PRPDHPGTPPHK ddPTM_KYSE-520_SHP099_60min_R1 4 SPRPDHPGTPPHK 13 1 P30291 P30291 WEE1 Wee1-like protein kinase 1 S(1)PRPDHPGTPPHK;S(1)PRPDHPGTPPHK;S(1)PRPDHPGTPPHK;S(1)PRPDHPGTPPHK 153.75 2.5993000000000003e-06 3720470000.0 1936840.0 1674800.0 1614480.0 1731070.0 1777630.0 1760550.0 1548360.0 1750130.0 2099090.0 1474340.0 True False 1829399.6242051842 1594340.0940739498 1718551.964059332 1895590.3723348265 1917519.3676688562 1749561.7544071383 1704883.3393373704 1744059.2075134132 1717948.169752761 1461278.4946191616 1.251917160857118 1.0910583437344479 1.1760605321898074 1.2972136244493595 1.3122203431650448 1.197281531788442 1.1667066514803512 1.1935159614923025 1.1756473362734956 1.0 20.47879972660117 -9.397866710147238 8.397959884267406 1.0000000000885774 1.2064388620917512 0.499963423900622 0.062057381915620664 0.0 0.0 0.06531089380528828 0.015840218450747165 4.000675161336115e-10 9.397866710147238 0.20643886200317385 S(ph)PRPQQDPARPQEPTMPPPETPSEGR ddPTM_KYSE-520_SHP099_60min_R1 4 SPRPQQDPARPQEPTMPPPETPSEGR 26 2 P29590-12;P29590-13;P29590-11;H3BT57;P29590-14;P29590-10;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4 P29590-12;P29590-2 PML Protein PML 1 S(1)PRPQQDPARPQEPTMPPPETPSEGR;S(1)PRPQQDPARPQEPTMPPPETPSEGR;S(1)PRPQQDPARPQEPTMPPPETPSEGR;S(1)PRPQQDPARPQEPTMPPPETPSEGR 164.64 3.0866e-10 3812670000.0 567160.0 479395.0 433607.0 441856.0 483204.0 518047.0 448701.0 524338.0 576859.0 527163.0 True False 535698.5041945707 456364.1446134352 461558.0010157299 483849.861391149 521229.40574532386 514813.67651322245 494060.07597975666 522519.19385940954 472115.9470320033 522492.7459466074 1.0252745293602847 0.873436326444368 0.8833768594806399 0.9260412994146962 0.9975820904479837 0.9853030123519272 0.9455826512665954 1.00005061871769 0.903583735266342 1.0 18.995051482042765 -5.656224981102185 7.159696994709288 0.971244964553574 0.9192920942889696 0.17167871848996785 0.04735122447996033 0.35458298314046427 21.52736752999595 0.013702299267610409 0.01769761953814895 2.2068611985941378e-06 5.656224981102185 -0.05195287026460438 S(ph)PRPSPVPK ddPTM_KYSE-520_SHP099_60min_R1 6 SPRPSPVPK 9 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(1)PRPSPVPK;S(0.998)PRPS(0.002)PVPK;S(0.868)PRPS(0.132)PVPK;S(0.991)PRPS(0.009)PVPK;S(0.977)PRPS(0.023)PVPK;S(1)PRPSPVPK 96.82 0.0019902 13892780000.0 7115870.0 5538280.0 5152910.0 6115430.0 6021850.0 6148600.0 6070930.0 6709420.0 6457280.0 6081090.0 True False 6721138.5059648445 5272212.715672239 5485074.823547515 6696638.628528931 6495735.335360394 6110224.306692633 6684638.850967097 6686146.588010394 5284800.726782131 6027216.27361643 1.1151314638211993 0.8747342846731503 0.9100511039495814 1.111066589371089 1.0777339057493027 1.0137722008482692 1.1090756574023188 1.1093258121959833 0.8768228128656751 1.0 22.5230604030357 -5.256309447047348 24.896356641273698 1.0501374379401334 0.9574484858531773 0.12612187083313475 0.08903770830187206 698.1166899496353 3388058.5951807946 0.023904399639395044 0.03983244373796592 5.542306672774128e-06 5.256309447047348 -0.09268895208695604 S(ph)PRPTGSDLLPGAPILSLR ddPTM_KYSE-520_SHP099_60min_R1 8 SPRPTGSDLLPGAPILSLR 19 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 S(0.991)PRPT(0.007)GS(0.002)DLLPGAPILSLR;S(0.864)PRPT(0.126)GS(0.009)DLLPGAPILSLR;S(0.999)PRPT(0.001)GS(0.001)DLLPGAPILSLR;S(0.999)PRPTGSDLLPGAPILSLR;S(1)PRPTGSDLLPGAPILSLR;S(0.999)PRPT(0.001)GS(0.001)DLLPGAPILSLR;S(0.999)PRPTGSDLLPGAPILSLR;S(1)PRPTGSDLLPGAPILSLR 129.93 1.6586e-06 7450230000.0 2449860.0 2076260.0 2228304.0 1954032.0 2097979.0 2303100.0 1811744.0 2097693.0 2741380.0 2355549.0 True False 2313961.3821251695 1976513.3530702037 2371944.041252461 2139742.613778855 2263078.011432377 2288725.498608434 1994892.7644374946 2090416.592588226 2243614.496566047 2334680.668449392 0.991125430297933 0.8465883063926384 1.0159608006810703 0.9165033328519366 0.9693308562559989 0.9803162931607774 0.8544606512557574 0.8953758091365029 0.9609941637355365 1.0 21.154793804676856 S(ph)PS(ph)AGILRTPIQVES(ph)SPQPGLPAGEQLEGLK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSAGILRTPIQVESSPQPGLPAGEQLEGLK 31 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 3 S(0.65)PS(0.694)AGILRT(0.651)PIQVES(0.519)S(0.486)PQPGLPAGEQLEGLK 53.793 0.01122 0.0 58693.0 73724.0 56278.0 46582.0 43134.0 53434.0 48202.0 47786.0 67775.0 45918.0 True False 55437.18228840526 70182.18837801997 59905.76992798371 51009.13927461102 46528.40040111177 53100.49858566412 53074.72856618609 47620.241519336254 55468.76846871431 45511.202243663436 1.218099710739323 1.5420860121925586 1.316286254255664 1.120804038564221 1.0223505006965612 1.166756665784573 1.1661904311388682 1.046341102227561 1.21879374163176 1.0 15.473934077217049 -5.191144599494833 3.8454913687178407 1.1084877201721584 1.38863022251689 0.5868989393607789 0.09781186690193582 0.14658816428143975 4.243108163601652 0.025717010181872602 0.046271426825050053 6.4395482335833e-06 5.191144599494833 0.2801425023447317 S(ph)PS(ph)PAPAPAPAAAAGPPTR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPAPAPAPAAAAGPPTR 19 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 2 S(1)PS(1)PAPAPAPAAAAGPPTR;S(1)PS(1)PAPAPAPAAAAGPPTR 216.3 1.3474e-15 761630000.0 1168040.0 909890.0 1002110.0 1023540.0 966660.0 910400.0 890710.0 1031990.0 1192430.0 953090.0 True False 1103246.492769988 866177.5186272669 1066707.6140326913 1120816.9338614787 1042730.6424569658 904717.8559042659 980751.6592918887 1028410.267558276 975914.7707141126 944646.3640927996 1.1678936528057264 0.9169330995722499 1.1292136979292928 1.1864936726219935 1.1038317428537 0.9577317928631637 1.0382209645550937 1.0886722340226438 1.033100647829563 1.0 19.849414820432635 -6.184585248746545 24.999933171576224 1.0300026503015294 1.096985591644793 0.20698172879469734 0.07495771256072789 241.66828127019528 78611.19529930316 0.02566120323717456 0.025661197586487012 6.537545902907598e-07 6.184585248746545 0.06698294134326366 S(ph)PS(ph)PAPEKK ddPTM_KYSE-520_SHP099_60min_R1 7 SPSPAPEKK 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(1)PS(1)PAPEKK;S(1)PS(1)PAPEKK;S(1)PS(1)PAPEKK;S(1)PS(1)PAPEKK;S(1)PS(1)PAPEKK;S(1)PS(1)PAPEKK;S(1)PS(1)PAPEKK 119.03 0.00087668 9411520000.0 17279500.0 12530570.0 11542150.0 13899780.0 11032200.0 12546810.0 14221590.0 10473750.0 11501940.0 12640290.0 True False 16320971.689170733 11928582.608430965 12286175.457092945 15220810.912078762 11900371.375368508 12468500.704787157 15659247.106543018 10437419.005841626 9413477.636311974 12528306.864596821 1.3027276443308897 0.9521304624282001 0.9806732537667875 1.2149136412910324 0.9498786630935128 0.9952263174540634 1.2499092874867057 0.8331069089101145 0.75137668146628 1.0 23.578688119326227 -7.2910688415785305 24.719954091443945 0.8441812482898357 1.0780461629581428 0.3776830573556851 0.1343087923227028 649.3895042503168 541783.9373393478 0.07095077918113714 0.034092332778865204 5.116007334424002e-08 7.2910688415785305 0.23386491466830717 S(ph)PS(ph)PAPPPR ddPTM_KYSE-520_SHP099_60min_R1 5 SPSPAPPPR 9 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(1)PS(1)PAPPPR;S(1)PS(1)PAPPPR;S(1)PS(1)PAPPPR;S(1)PS(1)PAPPPR;S(1)PS(1)PAPPPR 94.465 0.004090099999999999 9649060000.0 5381030.0 4645390.0 4584130.0 4146540.0 4282650.0 4544310.0 4117270.0 4522150.0 5226650.0 4701260.0 True False 5082533.539082639 4422218.491527459 4879630.354667334 4540625.914897295 4619670.190054744 4515947.275663798 4533483.832282912 4506463.717127746 4277622.113124394 4659610.493924933 1.0907636047496032 0.9490532518314613 1.047218509149908 0.9744646941664402 0.9914284028842621 0.9691684061471578 0.9729319302962209 0.9671331376309554 0.9180213922819163 1.0 22.151777931506516 -1.0000000000000002 0.6456948372880377 0.969158112402019 9.51012665954169 0.45605442620417147 0.034464757029422595 205.80246306684353 1.3502317393545464 0.013969252214801739 2509.876621868514 0.09999999999999995 1.0000000000000002 8.540968547139672 S(ph)PS(ph)PAPPPRR ddPTM_KYSE-520_SHP099_60min_R1 3 SPSPAPPPRR 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(1)PS(1)PAPPPRR;S(1)PS(1)PAPPPRR;S(1)PS(1)PAPPPRR 74.76 0.013555000000000001 3641150000.0 384080.0 365250.0 360710.0 333623.0 347570.0 350460.0 321621.0 335390.0 407830.0 331746.0 True False 362774.31675550237 347702.8417485726 383961.94375640637 365330.4296125875 374921.7815972185 348272.649143464 354133.5893984756 334226.61037061445 333778.3525576648 328806.9885344823 1.1033047636013305 1.0574679184840643 1.1677426488644718 1.111078664236709 1.1402488227767704 1.0592008725110789 1.077025737734091 1.016482684447456 1.0151193989073657 1.0 18.326881437133093 -7.00997332453906 1.1857195079581282 1.00333590983536 1.1140393308412038 0.6897385791831541 0.02955674975257635 0.28997499641537583 0.7644443708287738 0.023117985661795366 0.010637480386826055 9.772972471707597e-08 7.00997332453906 0.11070342100584374 S(ph)PS(ph)PEPIYNSEGK ddPTM_KYSE-520_SHP099_60min_R1 5 SPSPEPIYNSEGK 13 0 Q15637-5;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-6 Q15637-5;Q15637-6 SF1 Splicing factor 1 2 S(1)PS(0.998)PEPIY(0.002)NSEGK;S(1)PS(1)PEPIYNSEGK;S(1)PS(1)PEPIYNSEGK;S(1)PS(1)PEPIYNSEGK;S(1)PS(1)PEPIYNSEGK 209.53 5.9485e-12 3621660000.0 4561000.0 3604720.0 3072260.0 4065990.0 3897470.0 3716540.0 4001500.0 4236880.0 3881980.0 3848000.0 True False 4307992.237871911 3431543.84040497 3270302.7953898 4452420.467115533 4204178.715429155 3693343.695279487 4406010.670876597 4222183.2521752305 3177110.288752189 3813909.7136986987 1.1295475145619154 0.8997443825373325 0.8574672818403681 1.1674163263811537 1.1023278029704529 0.9683878152683673 1.1552477645318153 1.1070485588607686 0.8330323807458602 1.0 21.862839260604392 -3.924721077015933 17.60454440441099 1.019388202866223 3.4591762640446957 0.08307561860979151 0.11540014035849243 266.9735274131092 67916.18658162859 0.02860760296025477 2213.6654945983546 0.0001189265780916452 3.924721077015933 2.439788061178473 S(ph)PS(ph)PEPR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPEPR 7 0 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;A0A3B3IT83 Q9UDY2-7 TJP2 Tight junction protein ZO-2 2 S(1)PS(1)PEPR;S(1)PS(1)PEPR 105.52 0.007362100000000001 162270000.0 718830.0 626170.0 609210.0 670520.0 624020.0 676990.0 635100.0 630280.0 766460.0 647300.0 True False 678955.0669479211 596087.8532996684 648480.6513704644 734246.0192008103 673126.8238118833 672764.65429331 699302.105978689 628093.7057884575 627290.1848842604 641565.4255917796 1.0582787660691866 0.9291146771973213 1.0107786758806494 1.144460081407196 1.0491943564305877 1.0486298473343576 1.089993441173444 0.9790017989343864 0.977749360956676 1.0 19.291236870482606 -7.289184888370135 24.44641806514544 0.9837816603559859 1.0451356623729535 0.22685665173317981 0.052002430149971884 973.8959969346351 858088.4772688961 0.030736786781570165 0.01476982826032059 5.138248588753337e-08 7.289184888370135 0.06135400201696761 S(ph)PS(ph)PFTHTHLAQGYR ddPTM_KYSE-520_SHP099_60min_R1 6 SPSPFTHTHLAQGYR 15 0 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2 P38398 BRCA1 Breast cancer type 1 susceptibility protein 2 S(0.997)PS(0.501)PFT(0.501)HT(0.002)HLAQGYR;S(1)PS(0.999)PFT(0.001)HTHLAQGYR;S(1)PS(0.934)PFT(0.066)HT(0.001)HLAQGYR;S(1)PS(0.936)PFT(0.064)HTHLAQGYR;S(0.99)PS(0.721)PFT(0.287)HT(0.003)HLAQGYR;S(1)PS(0.998)PFT(0.002)HTHLAQGYR 165.8 2.8134000000000002e-08 4721000000.0 1906690.0 1928830.0 1846880.0 1845110.0 1926000.0 1886490.0 1834590.0 1931420.0 2144390.0 1871870.0 True False 1800922.1048077182 1836166.111567145 1965932.8399124807 2020468.6996474501 2077565.2425590341 1874715.7161520666 2020048.2610729714 1924720.354816815 1755022.8316728305 1855286.6880928245 0.9706974756871719 0.989694004356095 1.0596383041660244 1.089033146529191 1.1198081977803145 1.0104722510994861 1.0888065300298773 1.0374247641454086 0.945957755713182 1.0 20.823210705783257 -10.018942212417457 12.67666499114476 0.9999999999978337 1.0391021907831368 0.030499175606876427 0.05340183529080035 0.0 0.0 0.0543252703775932 0.013175813308129895 9.573214448027559e-11 10.018942212417457 0.03910219078530308 S(ph)PS(ph)PGNSPSGR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPGNSPSGR 11 0 Q13233 Q13233 MAP3K1 Mitogen-activated protein kinase kinase kinase 1 2 S(1)PS(0.991)PGNS(0.009)PSGR;S(1)PS(0.944)PGNS(0.056)PSGR 63.662 0.034935 59973000.0 118059.0 102975.0 96328.0 97933.0 114853.0 111119.0 99412.0 99356.0 111954.0 117201.0 True False 111510.03192521818 98027.9264313738 102537.4570102494 107240.52287536982 123891.27767582175 110425.46510349987 109461.53512762306 99011.35722586463 91625.9757306741 116162.69032099814 0.9599470502712787 0.8438847805649847 0.882705597872282 0.9231924861504736 1.0665324411260346 0.9506104309254175 0.9423123278665685 0.8523507586838909 0.788772845028636 1.0 16.82578724600137 -10.862461383119651 2.437338896788431 1.0395123710053669 0.9144857352040606 0.11496187654338919 0.07280042156376107 34390002.413240634 19809502.79592953 7874602.6744323755 0.0217667131863751 1.3725830038134101e-11 10.862461383119651 -0.12502663580130624 S(ph)PS(ph)PKPTK ddPTM_KYSE-520_SHP099_60min_R1 5 SPSPKPTK 8 1 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 S(0.996)PS(0.876)PKPT(0.128)K;S(1)PS(0.982)PKPT(0.018)K;S(1)PS(0.765)PKPT(0.235)K;S(0.995)PS(0.792)PKPT(0.213)K;S(0.996)PS(0.931)PKPT(0.073)K 99.815 0.008999600000000002 26676600000.0 13536500.0 9847690.0 10544430.0 10582490.0 10066700.0 11289100.0 13865000.0 8848750.0 12204740.0 11305860.0 True False 12785603.36065624 9374592.190715965 11224140.829484526 11588246.667858358 10858892.018312052 11218640.53942099 15266609.509359991 8818055.751563767 9988666.872458223 11205698.876225982 1.1409911601124838 0.836591478520372 1.00164576555753 1.03413868209898 0.9690508497734385 1.001154917987531 1.362396908750568 0.7869259962243105 0.8913916912090316 1.0 23.417729293766943 S(ph)PS(ph)PLRGNVVPS(ph)PLPTR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPLRGNVVPSPLPTR 17 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 3 S(1)PS(0.999)PLRGNVVPS(0.929)PLPT(0.072)R;S(1)PS(1)PLRGNVVPS(0.999)PLPT(0.001)R 133.76 0.00011734 345400000.0 385400.0 413130.0 398910.0 303720.0 348310.0 355290.0 283800.0 346910.0 483220.0 354410.0 True False 364021.09372414707 393282.6146792276 424624.3768785665 332585.4574832522 375720.0153871947 353072.5033218662 312489.27362108673 345706.6501794024 395479.42898490804 351270.20312680723 1.0362993800323475 1.119601409907387 1.2088254941603422 0.9468080540927353 1.0696040029662328 1.005130808645356 0.8895980098496407 0.9841616143416627 1.125855325799272 1.0 18.42222167802704 -5.27140677998957 24.99947365480085 1.000498661859229 1.1213780290634254 0.36691601160636966 0.07130826329131337 737.6842175920866 1850200.7944649349 0.02060923274022336 0.030958619913011833 5.352950409188208e-06 5.27140677998957 0.12087936720419634 S(ph)PS(ph)PLRGNVVPS(ph)PLPTRR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPLRGNVVPSPLPTRR 18 2 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 3 S(1)PS(1)PLRGNVVPS(0.963)PLPT(0.037)RR 67.832 0.010689 399480000.0 373630.0 301470.0 332680.0 226570.0 277460.0 213520.0 223770.0 219100.0 379500.0 230930.0 True False 352903.9990870604 286986.9286843043 354125.08510681987 248103.14467924528 299294.52346855117 212187.34247877751 246390.8553847448 218339.99323832442 310592.3664164817 228884.13986082154 1.5418455787353902 1.2538524026121405 1.5471805312598508 1.083968268094549 1.3076245634605541 0.9270513134191084 1.0764872373182721 0.9539323841795734 1.3569850956267426 1.0 17.804257971682162 -5.4746166673273535 1.4093115535916791 1.0735933127108162 1.439066096961834 0.4762469827802961 0.15856466585396758 0.36568496171033454 1.4603158329181418 0.05280048561406427 0.098386192158517 3.352612289663522e-06 5.4746166673273535 0.3654727842510179 S(ph)PS(ph)PLRGNVVPSPLPTR ddPTM_KYSE-520_SHP099_60min_R1 3 SPSPLRGNVVPSPLPTR 17 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 2 S(1)PS(1)PLRGNVVPSPLPTR;S(0.642)PS(0.889)PLRGNVVPS(0.357)PLPT(0.112)R;S(1)PS(0.996)PLRGNVVPS(0.004)PLPTR 123.14 0.00027742 2961870000.0 1246500.0 1044680.0 980630.0 976240.0 1032400.0 1128690.0 1047820.0 998310.0 1322530.0 1108520.0 True False 1177354.1601638536 994492.0047033506 1043842.9788634765 1069021.5560827425 1113644.0064475301 1121645.4270437015 1153743.871337726 994847.0956173053 1082391.89026822 1098699.3752155097 1.0715889957914244 0.905153882069225 0.9500715140196807 0.9729882260769049 1.0136021113410474 1.0208847409453483 1.0500996881985296 0.9054770741288227 0.9851574640751107 1.0 20.067365261147327 -4.2202716228109765 22.876545936185405 0.9788571140644878 1.0715898377254043 0.2797478311189381 0.04496177218417698 12538.868161497467 6967298.115782711 0.011783240188434326 3.550858019175061 6.021828422658856e-05 4.2202716228109765 0.09273272366091645 S(ph)PS(ph)PPPTR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPPPTR 8 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(1)PS(0.987)PPPT(0.013)R 57.108000000000004 0.048862 1370200000.0 363020.0 373450.0 310950.0 305920.0 377030.0 351990.0 343270.0 353570.0 406120.0 387480.0 True False 342882.5569375712 355508.9014401215 330994.3345375907 334994.5448217978 406700.1159927474 349793.09984593897 377971.0815923545 352343.54819385847 332378.845452073 384047.228654878 0.8928135170731848 0.9256905789563651 0.8618584117815286 0.8722743449942687 1.0589846395122053 0.9108075094594126 0.9841786462466996 0.9174484852499486 0.8654634655644488 1.0 18.55092421339476 S(ph)PS(ph)PPPTRR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPPPTRR 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(1)PS(1)PPPTRR;S(1)PS(1)PPPTRR 64.12100000000001 0.020996 2262350000.0 450420.0 287590.0 393940.0 285030.0 325330.0 365760.0 299770.0 403710.0 399070.0 327820.0 True False 425434.3047099909 273773.7447186092 419334.0027262855 312119.1655026059 350931.6201255085 363477.156168217 330073.67707326694 402309.62423662195 326608.9477360357 324915.7698401004 1.3093679784128618 0.8425991291630458 1.2905929525447497 0.960615625570307 1.0800695217046905 1.1186811780391384 1.0158745980095238 1.238196669969602 1.005211128708122 1.0 18.309706241243592 -3.8602012295536086 9.617584899781416 1.0738236670485646 6.515960722192268 0.25720519264835995 0.12484239523366206 56408.92561996012 87532.84400093857 0.028907154719761415 6357368.218288559 0.00013797448142349392 3.8602012295536086 5.442137055143704 S(ph)PS(ph)PSFR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPSFR 7 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 2 S(1)PS(0.994)PS(0.006)FR;S(1)PS(0.982)PS(0.018)FR 123.86 0.0035606 1369720000.0 2613200.0 2485400.0 2299400.0 2263600.0 2275200.0 2221200.0 2149100.0 2209800.0 2608700.0 2302700.0 True False 2468240.586714947 2365997.6533385427 2447623.00317008 2478731.863423841 2454245.295882819 2207336.666887695 2366352.0011947765 2202134.7195711955 2135025.839975435 2282299.869473492 1.0814707654013713 1.036672562174908 1.0724370780140853 1.086067565694452 1.075338665487894 0.9671545340783416 1.0368278212891784 0.9648752773574887 0.9354712185423593 1.0 21.122056927900932 -6.257765307087765 24.94679000720778 0.9821681018653334 1.0695076207847856 0.7262562537618336 0.02747504854330294 178.25125748281127 1210318.8771748764 0.009588838490108465 0.00922550706759372 5.523758627772332e-07 6.257765307087765 0.08733951891945213 S(ph)PS(ph)PSPTPEAK ddPTM_KYSE-520_SHP099_60min_R1 3 SPSPSPTPEAK 11 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 S(0.999)PS(0.897)PS(0.052)PT(0.052)PEAK;S(1)PS(0.944)PS(0.051)PT(0.005)PEAK;S(1)PS(0.952)PS(0.048)PTPEAK 166.7 2.5724e-05 1164620000.0 3671000.0 3375500.0 3090600.0 3201900.0 3156060.0 3360200.0 3122970.0 3526400.0 3969500.0 3267700.0 True False 3467362.312042928 3213335.9132712064 3289825.0211348385 3506207.613313661 3404423.9664750043 3339227.7453970984 3438670.2848500535 3514167.7414679453 3248738.8629518473 3238750.7202321286 1.070586349972132 0.9921528980905635 1.0157697536224861 1.0825802651036889 1.0511534417292239 1.0310233895240224 1.0617273701767316 1.0850380424511574 1.003083949208355 1.0 21.627006000555543 S(ph)PS(ph)PYYSR ddPTM_KYSE-520_SHP099_60min_R1 10 SPSPYYSR 8 0 P62995;P62995-3;H7C2L4;H7BXF3;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 2 S(1)PS(0.977)PY(0.023)YSR;S(1)PS(0.654)PY(0.346)YSR;S(1)PS(0.955)PY(0.045)YSR;S(0.992)PS(0.945)PY(0.063)YSR;S(0.999)PS(0.746)PY(0.255)YSR;S(1)PS(0.998)PY(0.002)YSR;S(1)PS(0.997)PY(0.003)YSR;S(1)PS(0.959)PY(0.041)YSR;S(1)PS(0.997)PY(0.003)YSR;S(1)PS(0.995)PY(0.004)Y(0.001)SR 118.4 0.0011063 28784710000.0 20201980.0 17094940.0 16658810.0 16651720.0 18993180.0 17328850.0 15076450.0 18011620.0 21011640.0 17579070.0 True False 19081335.897751313 16273673.42237194 17732663.547638398 18234294.46227783 20487835.209588446 17220694.219339456 16600524.69797262 17949141.89416372 17196455.83634049 17423333.116109528 1.0951599083018624 0.9340160871587413 1.0177538034466473 1.0465445584242714 1.1758849511202591 0.9883696824585927 0.9527754871783893 1.0301784265128946 0.9869785374441779 1.0 24.054517304801518 -9.706661503710293 7.836916712518676 0.9999976648500151 1.0243678624279227 0.0126003235053318 0.06672405733975341 0.0 0.0 0.06661797890051929 0.016157233151294692 1.9648911487682197e-10 9.706661503710293 0.024370197577907593 S(ph)PS(ph)QSSLPAVVVETFPATVNGTVEGGSGAGR ddPTM_KYSE-520_SHP099_60min_R1 3 SPSQSSLPAVVVETFPATVNGTVEGGSGAGR 31 0 O00499-9;O00499-10 O00499-9 BIN1 Myc box-dependent-interacting protein 1 2 S(0.489)PS(0.489)QS(0.489)S(0.489)LPAVVVET(0.04)FPAT(0.001)VNGTVEGGSGAGR;S(0.5)PS(0.5)QS(0.5)S(0.5)LPAVVVETFPATVNGTVEGGSGAGR;S(0.5)PS(0.5)QS(0.5)S(0.5)LPAVVVETFPATVNGTVEGGSGAGR 132.51 1.6746e-05 152808000.0 113977.0 107028.0 97347.0 92000.0 90426.0 104636.0 86352.0 93491.0 107854.0 87015.0 True False 107654.4686024836 101886.21422769685 103622.1433807071 100743.65233919147 97542.01174643976 103982.92791124668 95081.30287430607 93166.70154196353 88270.43237808502 86244.11479664568 1.2482529255047863 1.1813700502107716 1.2014981384531216 1.1681220518841677 1.130999048183558 1.2056814329467838 1.1024671433928859 1.080267352289957 1.0234951403491959 1.0 16.396138391766687 -7.2445740050738126 0.670664737803772 0.9908624962399986 1.2016379975341334 0.8557550315252607 0.029471181843557404 0.25253644818566134 0.22499756499878704 0.02764708679204826 0.01422187473513283 5.694111864975231e-08 7.2445740050738126 0.2107755012941348 S(ph)PS(ph)VSPSKQPVSTSSK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSVSPSKQPVSTSSK 16 1 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 2 S(0.998)PS(0.696)VS(0.263)PS(0.043)KQPVSTSSK;S(0.915)PS(0.793)VS(0.17)PS(0.123)KQPVSTSSK 134.29 1.455e-05 3487000000.0 4584100.0 3911300.0 3675940.0 3873400.0 4064600.0 4024800.0 4061500.0 3917300.0 4213600.0 3690200.0 True False 4329810.834823207 3723395.2770190057 3912896.9741119584 4241526.771419827 4384460.8955895305 3999679.730276242 4472076.056420159 3903711.800604696 3448516.4562120903 3657507.698932156 1.1838145511183302 1.018014337497112 1.069826038986703 1.1596767855494003 1.1987564364853192 1.0935533318067892 1.2227113172518607 1.0673147186387117 0.9428596574708284 1.0 21.80242947051625 -7.568590186186944 5.099667945318923 0.9764790339671162 1.1310727365546 0.5377845773217153 0.06029104453118897 0.16027289019459426 9.473243522375373 0.043942135433162215 0.01605391491841241 2.7002863049455454e-08 7.568590186186944 0.15459370258748384 S(ph)PSAGDVHILTGFAK ddPTM_KYSE-520_SHP099_60min_R1 5 SPSAGDVHILTGFAK 15 0 A0A3B3ITL0;Q9Y2H2;A0A3B3IRJ9;Q9Y2H2-4 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 S(0.928)PS(0.072)AGDVHILTGFAK;S(0.988)PS(0.012)AGDVHILTGFAK;S(0.99)PS(0.01)AGDVHILTGFAK;S(0.987)PS(0.013)AGDVHILTGFAK;S(0.976)PS(0.024)AGDVHILTGFAK 243.9 4.908600000000001e-19 3062630000.0 3637230.0 3668370.0 3379460.0 4519250.0 3695460.0 3577040.0 3607410.0 3636950.0 4018600.0 3655660.0 True False 3435465.601261754 3492135.9988643755 3597305.398927184 4948758.161237947 3986271.6777088316 3554714.3665243853 3972082.207728836 3624334.2693205127 3288923.54066212 3623273.696460442 0.9481661859047091 0.9638068474583705 0.9928329185955158 1.3658251006741124 1.1001850844453183 0.9810780703640931 1.096268882919097 1.000292711218892 0.9077215292554501 1.0 21.78886235817147 -7.48046709891545 4.767845018529504 0.9527583375223879 1.0667233829258227 0.13125117428903232 0.11542889073716248 0.4248958281095098 22.44431463441503 0.07708541778786687 0.03295629490766274 3.307751698255026e-08 7.48046709891545 0.11396504540343477 S(ph)PSAGILR ddPTM_KYSE-520_SHP099_60min_R1 4 SPSAGILR 8 0 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 S(0.999)PS(0.001)AGILR;S(0.999)PS(0.001)AGILR;S(0.999)PS(0.001)AGILR;S(0.996)PS(0.004)AGILR 133.13 0.00076596 3018330000.0 623640.0 579330.0 610620.0 570000.0 545650.0 556890.0 545750.0 594220.0 609890.0 562890.0 True False 589045.4460044822 551498.117207941 649981.5422265442 624172.6286232505 588589.5506761866 553414.2429421432 600919.7360067223 592158.7895119906 499149.3500757534 557903.2325217933 1.0558200986610566 0.9885193077571887 1.1650435135293002 1.1187829577575865 1.0550029402333576 0.9919538204513365 1.0771038792704049 1.0614005350629674 0.8946880408266055 1.0 19.089655384900862 -7.743008365525122 24.417480852537608 0.9473440774923149 1.0645762883371541 0.4216257986013796 0.054746111336831056 155.28347387576187 205722.23127047453 0.0384306276896272 0.014461179718604247 1.807139315955589e-08 7.743008365525122 0.11723221084483926 S(ph)PSAGILRT(ph)PIQVES(ph)SPQPGLPAGEQLEGLK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSAGILRTPIQVESSPQPGLPAGEQLEGLK 31 1 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 3 S(0.971)PS(0.029)AGILRT(0.999)PIQVES(0.625)S(0.375)PQPGLPAGEQLEGLK;S(0.971)PS(0.066)AGILRT(0.963)PIQVES(0.805)S(0.195)PQPGLPAGEQLEGLK 131.26 0.00024204 183808000.0 321060.0 335410.0 325110.0 261450.0 355410.0 288170.0 244260.0 270920.0 428020.0 327260.0 True False 303250.16178275784 319296.4001393257 346067.110794392 286298.12939219095 383378.7449937201 286371.42413876596 268952.1845478737 269980.2417532035 350302.35750614625 324360.73100442695 0.9349163841248681 0.9843867324832484 1.066920492264117 0.8826534843032016 1.1819517849973264 0.8828794510728165 0.8291761574066836 0.8323456446690483 1.0799777039020337 1.0 18.307239643515988 S(ph)PSAMQQQDGLDR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSAMQQQDGLDR 13 0 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47;O60343-4;O60343-5 O60343-2 TBC1D4 TBC1 domain family member 4 1 S(0.981)PS(0.019)AMQQQDGLDR;S(0.999)PS(0.001)AMQQQDGLDR 291.13 3.2306999999999996e-30 803550000.0 459014.0 442776.0 510125.0 757462.0 482170.0 495665.0 607406.0 577673.0 517541.0 460832.0 True False 433551.5783982768 421504.37633967405 543008.4737288586 829450.9607407462 520114.0358279792 492571.3708774039 668808.5261912955 575669.1871928922 423568.6005469107 456749.3870018708 0.9492110788459603 0.9228351221365682 1.188854302122215 1.8159870255881676 1.138729576063665 1.0784280940378939 1.4642789792918893 1.26036115991664 0.9273545024925799 1.0 18.80104326706636 -4.825294320160983 5.089407387813768 1.2669168862634257 0.9351577546698502 0.19164394112298722 0.2411137958069198 0.2780552832353824 13.847936059040428 0.06454019254320917 0.14413744938932407 1.4952220048700475e-05 4.825294320160983 -0.3317591315935755 S(ph)PSAPAATSSASSSTSSYK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSAPAATSSASSSTSSYK 19 0 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.863)PS(0.137)APAATSSASSSTSSYK;S(0.917)PS(0.083)APAATSSASSSTSSYK 300.2 3.7555999999999996e-44 1394590000.0 953920.0 915610.0 656100.0 679210.0 582550.0 890970.0 759740.0 794480.0 941940.0 878720.0 True False 901004.1560076246 871622.7212413702 698393.2557971174 743761.9141880665 628393.370743906 885409.1257414591 836541.9335478658 791724.1343130254 770907.4403750753 870935.2244338144 1.034524877086419 1.0007893776577963 0.8018888617705585 0.8539807477319316 0.721515622648536 1.016618803444371 0.9605099324024846 0.9090505379751023 0.8851489970178137 1.0 19.732205897206725 -9.490240067184173 15.565900650774635 0.9999999999953216 0.9063657987030602 0.07620798544059959 0.09418834636269291 0.0 0.0 0.09650612900621373 0.02340617431835904 3.234148318368038e-10 9.490240067184173 -0.09363420129226141 S(ph)PSAPAATSSASSSTSSYKR ddPTM_KYSE-520_SHP099_60min_R1 4 SPSAPAATSSASSSTSSYKR 20 1 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.982)PS(0.018)APAATSSASSSTSSYKR;S(0.939)PS(0.061)APAATSSASSSTSSYKR;S(0.984)PS(0.016)APAATSSASSSTSSYKR;S(0.972)PS(0.028)APAATSSASSSTSSYKR 232.82 2.7975e-26 2297800000.0 1446951.0 1498904.0 1268339.0 1367570.0 1017964.0 1244100.0 1477950.0 1489930.0 1724300.0 1058914.0 True False 1366685.7436046943 1426894.401939228 1350098.161354151 1497543.441625088 1098071.975377136 1236335.110424536 1627355.6094019893 1484761.7805822773 1411210.5860657196 1049532.8457826262 1.3021848235588762 1.3595519260525926 1.2863800945147137 1.4268666746759933 1.046248318753964 1.1779861062877106 1.5505523394920397 1.414688245869147 1.344608310008053 1.0 20.001315886698602 S(ph)PSDLHIS(ph)PLAK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSDLHISPLAK 12 0 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785;O95785-2 M0QXA7 WIZ Protein Wiz 2 S(0.956)PS(0.044)DLHIS(1)PLAK;S(0.999)PS(0.001)DLHIS(1)PLAK;S(0.999)PS(0.001)DLHIS(1)PLAK;S(0.997)PS(0.003)DLHIS(1)PLAK 181.51 2.5453000000000004e-07 1366730000.0 2396720.0 2261630.0 2156550.0 2595030.0 2151280.0 1954850.0 2014570.0 2085250.0 2573060.0 2141960.0 True False 2263769.1638571317 2152977.900024161 2295564.6636019982 2841660.8709757836 2320573.4968911726 1942649.056035213 2218222.3959085005 2078016.7544510108 2105857.165564144 2122983.900819663 1.0663148048287663 1.0141282273468573 1.0812916022187937 1.3385221008405417 1.0930716412852788 0.9150559527489471 1.0448606770178837 0.9788188943160188 0.991932706013971 1.0 21.01766200024919 -6.019867682332046 24.415079089014014 0.9902117442645824 1.1267364585341737 0.3823253704945634 0.08491952117115868 666.9186172491935 819565.094447786 0.029918822096382792 0.030333859771286702 9.5528359050964e-07 6.019867682332046 0.13652471426959134 S(ph)PSDSGYSYETIGK ddPTM_KYSE-520_SHP099_60min_R1 10 SPSDSGYSYETIGK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(1)PSDSGYSYETIGK;S(0.998)PS(0.002)DSGYSYETIGK;S(1)PSDSGYSYETIGK;S(0.984)PS(0.016)DSGYSYETIGK;S(0.759)PS(0.241)DSGYSYETIGK;S(0.995)PS(0.005)DSGYSYETIGK;S(1)PSDSGYSYETIGK;S(0.975)PS(0.025)DSGYSYETIGK;S(1)PSDSGYSYETIGK;S(0.999)PS(0.001)DSGYSYETIGK 394.17 1.0289999999999998e-81 27269450000.0 10537580.0 8823830.0 7840300.0 9560360.0 8902510.0 9280280.0 9420110.0 10591260.0 10255110.0 9310730.0 True False 9953039.431255065 8399919.961961137 8345698.28292353 10468973.739972966 9603086.88864704 9222358.330174925 10372386.650213992 10554521.391078658 8393040.534285443 9228244.17583833 1.0785409706988915 0.9102403232842563 0.9043647007926482 1.1344491476919467 1.0406190718045947 0.999362192249007 1.1239826832249726 1.1437193457356523 0.9094948480297429 1.0 23.137624747013312 -5.253085305366649 24.997758116465413 1.0567735489886032 0.9589678333626533 0.18555361859703323 0.0813849100499157 941.9465899543408 2818563.6505099465 0.02186727972467518 0.03711273973451396 5.583605091935565e-06 5.253085305366649 -0.09780571562594986 S(ph)PSDSSTASTPVAEQIER ddPTM_KYSE-520_SHP099_60min_R1 4 SPSDSSTASTPVAEQIER 18 0 Q16643;Q16643-2;Q16643-3;D6R9Q9 Q16643 DBN1 Drebrin 1 S(0.5)PS(0.5)DSSTASTPVAEQIER;S(0.997)PS(0.003)DSSTASTPVAEQIER;S(0.995)PS(0.005)DSSTASTPVAEQIER;S(0.936)PS(0.064)DSSTASTPVAEQIER 354.96 3.228499999999999e-76 1134090000.0 704169.0 657642.0 594753.0 540114.0 633047.0 684783.0 628943.0 697581.0 698406.0 636627.0 True False 665107.3418439002 626047.8911792336 633091.7300184456 591446.2721688044 682864.1973552799 680509.0152896431 692522.6963321598 695161.2543276291 571593.0757825284 630986.9800683118 1.0540745892599788 0.9921724392973315 1.0033356471949801 0.9373351445457296 1.0822159868993682 1.078483450190953 1.0975229572204264 1.1017045934170777 0.9058714265715065 1.0 19.26725071104769 -5.782745357800125 24.999966603604747 1.0537553095902648 0.9968757854564291 0.1160638590586538 0.06105420915891336 438.9154287259368 515011.3611633461 0.018923272011578653 0.021476511965073535 1.6491290507365033e-06 5.782745357800125 -0.05687952413383568 S(ph)PSEAADEVCALEEKEPQK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSEAADEVCALEEKEPQK 19 1 Q9H6Z4-3;Q9H6Z4;K7EN31 Q9H6Z4-3 RANBP3 Ran-binding protein 3 1 S(0.983)PS(0.017)EAADEVCALEEKEPQK 136.56 2.3675e-06 190820000.0 122740.0 105620.0 87112.0 106700.0 100770.0 90382.0 99697.0 115470.0 133360.0 116910.0 True False 115931.36752387596 100545.85666114779 92727.37890412801 116840.7359194753 108700.02569713071 89817.89241249945 109775.3457089552 115069.46152090062 109145.18573202121 115874.26835460356 1.0004927683262488 0.8677151371817332 0.8002413324445734 1.008340657322764 0.9380859723271959 0.7751323368673602 0.9473660310243844 0.9930544818523468 0.9419277228833092 1.0 16.822200703949818 -6.988950745631562 24.93750118482055 0.9745367444790671 0.8961210889270801 0.20233796477688426 0.07206973471696876 346.55481339408 782151.205007013 0.03075323447490223 0.020712347129923613 1.0257682544682106e-07 6.988950745631562 -0.07841565555198704 S(ph)PSELFAQHIVTIVHHVK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSELFAQHIVTIVHHVK 18 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.654)PS(0.346)ELFAQHIVTIVHHVK;S(0.5)PS(0.5)ELFAQHIVTIVHHVK;S(0.989)PS(0.011)ELFAQHIVTIVHHVK;S(0.95)PS(0.05)ELFAQHIVTIVHHVK 232.58 3.2198000000000004e-23 5043750000.0 845982.0 1013740.0 1196690.0 1197970.0 1060480.0 1066550.0 956420.0 893378.0 1171780.0 641141.0 True False 799053.6920366926 965038.4087452387 1273830.5521716976 1311824.708617186 1143933.7426941874 1059893.265833364 1053104.2673596872 890279.0802339922 959014.290169974 635460.9895401509 1.2574394104269486 1.51864303966729 2.004577107232815 2.0643670189203642 1.8001636001637034 1.6679124026171177 1.6572288223731286 1.400997220739293 1.5091631208769578 1.0 19.277444036450003 -8.019606423874441 0.7968007328542743 1.0124102320557617 1.743587149117221 0.4744065464463232 0.2243528310818656 0.6561035047302355 0.9474736728629002 0.23937143076668715 0.08874692663733319 9.558584331833576e-09 8.019606423874441 0.7311769170614593 S(ph)PSFASEWDEIEK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSFASEWDEIEK 13 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.927)PS(0.073)FASEWDEIEK 297.16 1.9154e-30 2529200000.0 2452800.0 2172000.0 2030100.0 1630400.0 2105400.0 2052300.0 1776300.0 2032000.0 2527900.0 2028900.0 True False 2316738.2944644233 2067653.859761531 2160963.494274845 1785352.7258023643 2271083.0019126614 2039490.8344379673 1955865.7390173909 2024951.4662723646 2068897.0831731893 2010925.5244603157 1.1520756319835268 1.0282100627851147 1.0746114005663117 0.8878263784938083 1.1293720101952387 1.0142050561446416 0.9726196794594362 1.0069748688558782 1.0288282972232061 1.0 20.939428221091063 -3.623581042479241 1.2688160680254201 1.0114747159433108 1.5741374909001746 0.32905088976217034 0.05904147819906632 7.2374813600323105 3.1800459963167294 0.01663725259429338 7.885486016862259 0.00023791342959300854 3.623581042479241 0.5626627749568638 S(ph)PSFGDPQLS(ph)PEARPR ddPTM_KYSE-520_SHP099_60min_R1 6 SPSFGDPQLSPEARPR 16 1 O95425-2;O95425-3 O95425-2 SVIL Supervillin 2 S(0.943)PS(0.057)FGDPQLS(1)PEARPR;S(0.87)PS(0.13)FGDPQLS(1)PEARPR;S(0.915)PS(0.09)FGDPQLS(0.995)PEARPR;S(0.989)PS(0.011)FGDPQLS(1)PEARPR;S(0.998)PS(0.002)FGDPQLS(1)PEARPR;S(0.998)PS(0.002)FGDPQLS(1)PEARPR 142.45 9.6814e-06 3267050000.0 3139260.0 2916500.0 3122010.0 2481200.0 2799900.0 2765350.0 2336120.0 2582560.0 3845800.0 2691230.0 True False 2965118.9898403417 2776386.9622442517 3323259.7599926214 2717012.5020000213 3020236.200748198 2748090.4248955026 2572277.807934083 2573601.702134037 3147499.6647286075 2667387.7959452546 1.1116190133087036 1.0408636368752564 1.245885493307111 1.0186042337489143 1.132282379539756 1.0302553041117326 0.9643433968784929 0.9648397229852428 1.1799932763856757 1.0 21.346996154473977 -6.318887339196129 6.708576106796117 1.0211911490318957 1.1084452028335017 0.20517262686600957 0.08015093988705199 0.3887730745760537 37.52874565670888 0.02773798490519886 0.024515646812982236 4.79857912955352e-07 6.318887339196129 0.087254053801606 S(ph)PSGGAAGPLLTPSQSLDGSR ddPTM_KYSE-520_SHP099_60min_R1 8 SPSGGAAGPLLTPSQSLDGSR 21 0 Q96CX2 Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 1 S(0.997)PS(0.003)GGAAGPLLTPSQSLDGSR;S(0.676)PS(0.324)GGAAGPLLTPSQSLDGSR;S(0.5)PS(0.5)GGAAGPLLTPSQSLDGSR;S(0.972)PS(0.028)GGAAGPLLTPSQSLDGSR;S(0.8)PS(0.2)GGAAGPLLTPSQSLDGSR;S(0.5)PS(0.5)GGAAGPLLTPSQSLDGSR;S(0.999)PS(0.001)GGAAGPLLTPSQSLDGSR;S(0.646)PS(0.354)GGAAGPLLTPSQSLDGSR 330.87 5.499199999999999e-65 16556330000.0 3602970.0 3515220.0 2871800.0 2285031.0 2480120.0 3314100.0 2523920.0 3262490.0 3721620.0 3483650.0 True False 3403106.0717573715 3346343.554747209 3056920.8230424593 2502199.659220376 2675291.334047513 3293415.472597026 2779062.464685456 3251173.1836608937 3045867.622405551 3452787.571238691 0.9856111914051242 0.9691715710001542 0.8853486523486835 0.7246897202896005 0.7748207148138423 0.9538424836879003 0.8048750197766915 0.941608227144577 0.8821474126521033 1.0 21.71933014610224 -9.340467339396472 12.362843861406533 0.999999742265357 0.8770794520122788 0.15610270902804846 0.08324881157658034 0.0 0.0 0.08647118797472671 0.02097234362308459 4.565965867180785e-10 9.340467339396472 -0.12292029025307827 S(ph)PSGGAAGPLLTPSQSLDGSRR ddPTM_KYSE-520_SHP099_60min_R1 5 SPSGGAAGPLLTPSQSLDGSRR 22 1 Q96CX2 Q96CX2 KCTD12 BTB/POZ domain-containing protein KCTD12 1 S(0.99)PS(0.01)GGAAGPLLTPSQSLDGSRR;S(0.953)PS(0.047)GGAAGPLLTPSQSLDGSRR;S(0.801)PS(0.199)GGAAGPLLTPSQSLDGSRR;S(0.927)PS(0.073)GGAAGPLLTPSQSLDGSRR;S(0.96)PS(0.04)GGAAGPLLTPSQSLDGSRR 114.9 0.00010604 5509420000.0 863720.0 937480.0 789590.0 491629.0 900630.0 783760.0 892210.0 887170.0 1051780.0 977350.0 True False 815807.7298168662 892442.0536138309 840488.2347886682 538353.2723463508 971504.4571162724 778868.2631189893 982403.2939304785 884092.6143370339 860803.2652161471 968691.4393667937 0.8421750174133228 0.921286198417522 0.8676532078554051 0.5557531020386194 1.0029039357995333 0.8040416498654241 1.0141550281198395 0.9126669013560607 0.8886248295730061 1.0 19.885677666612963 S(ph)PSGHPHVR ddPTM_KYSE-520_SHP099_60min_R1 11 SPSGHPHVR 9 0 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-4;Q8WX93-7 Q8WX93-3 PALLD Palladin 1 S(0.996)PS(0.004)GHPHVR;S(0.997)PS(0.003)GHPHVR;S(0.998)PS(0.002)GHPHVR;S(0.985)PS(0.015)GHPHVR;S(0.996)PS(0.004)GHPHVR;S(0.999)PS(0.001)GHPHVR;S(0.998)PS(0.002)GHPHVR;S(0.999)PS(0.001)GHPHVR;S(0.995)PS(0.005)GHPHVR;S(0.999)PS(0.001)GHPHVR;S(0.999)PS(0.001)GHPHVR 169.58 5.8471e-05 16050830000.0 1912235.0 1956414.0 2188744.0 2901482.0 1676323.0 2038177.0 1870197.0 1686785.0 2205666.0 2012979.0 True False 1806159.5126040347 1862424.9348027185 2329833.940354221 3177237.9769176305 1808240.0831268367 2025455.981319629 2059254.7641238023 1680933.9365335768 1805172.654715089 1995145.5721339649 0.905277057388953 0.9334782187400535 1.167751352530272 1.5924842885120032 0.9063198737888494 1.0151920790186977 1.0321325886618227 0.8425119249497599 0.9047824278728268 1.0 20.92806258320731 S(ph)PSGLRPR ddPTM_KYSE-520_SHP099_60min_R1 7 SPSGLRPR 8 1 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4 P49815 TSC2 Tuberin 1 S(0.791)PS(0.209)GLRPR;S(0.686)PS(0.314)GLRPR;S(0.992)PS(0.008)GLRPR;S(0.999)PS(0.001)GLRPR;S(0.967)PS(0.033)GLRPR;S(0.675)PS(0.325)GLRPR;S(0.566)PS(0.434)GLRPR 78.932 0.0081405 6096400000.0 1027465.0 973408.0 830302.0 768516.0 870329.0 959678.0 776637.0 911158.0 1016553.0 872604.0 True False 970469.468249301 926644.0185648039 883824.5954501709 841555.5295772395 938818.9408053792 953688.2936275216 855147.0472066939 907997.4055638761 831972.6004157428 864873.4074356396 1.122094239348571 1.0714215636624957 1.0219120947084288 0.9730389700296858 1.085498678458607 1.1026911978427214 0.9887540070658613 1.0498616303351258 0.9619588176292203 1.0 19.722129453625044 -4.480837819925071 2.7490440177420354 1.0269555879501056 1.1224956166842994 0.33856879139198826 0.04372114447287876 0.3847645235993338 5.087257050288688 0.011801151436243714 0.06546692519358654 3.304929351036504e-05 4.480837819925071 0.09554002873419387 S(ph)PSGPSGSLENGTK ddPTM_KYSE-520_SHP099_60min_R1 10 SPSGPSGSLENGTK 14 0 Q14134-2;Q14134;E9PM74;E9PI31;E9PLI4;E9PJ94;E9PJD4 Q14134-2 TRIM29 Tripartite motif-containing protein 29 1 S(0.994)PS(0.006)GPSGSLENGTK;S(1)PSGPSGSLENGTK;S(0.996)PS(0.004)GPSGSLENGTK;S(0.995)PS(0.005)GPSGSLENGTK;S(0.984)PS(0.016)GPSGSLENGTK;S(0.848)PS(0.152)GPSGSLENGTK;S(0.997)PS(0.003)GPSGSLENGTK;S(0.595)PS(0.405)GPSGSLENGTK;S(1)PSGPSGSLENGTK;S(0.998)PS(0.002)GPSGSLENGTK 367.05 2.5442999999999997e-67 24570800000.0 14410530.0 12330140.0 10827200.0 10102720.0 10724390.0 11177530.0 10979040.0 12194330.0 14264970.0 11239900.0 True False 13611149.17422063 11737781.566482551 11525138.636132522 11062879.471306479 11568338.479567856 11107766.889175765 12088908.508304633 12152030.715408033 11674811.038630093 11140323.230509879 1.221791225675026 1.0536302514397804 1.0345425709524076 0.9930483382213448 1.0384203617975623 0.997077612501857 1.085148811050372 1.0908149129934939 1.0479777648332875 1.0 23.40928775652041 -4.260116738323461 4.033262454998514 1.0382779435486387 1.238201964023092 0.7491178424182525 0.032055647951840655 0.12433683827697747 4.30469738926268 0.008681509485035443 0.07285893622860293 5.493931771641553e-05 4.260116738323461 0.19992402047445323 S(ph)PSGSQRPSVSDDTEHLVNGR ddPTM_KYSE-520_SHP099_60min_R1 5 SPSGSQRPSVSDDTEHLVNGR 21 1 P16144-4;P16144-2;P16144-3 P16144-4 ITGB4 Integrin beta-4 1 S(0.792)PS(0.165)GS(0.031)QRPS(0.011)VS(0.001)DDTEHLVNGR;S(0.832)PS(0.162)GS(0.006)QRPSVSDDTEHLVNGR;S(0.982)PS(0.018)GSQRPSVSDDTEHLVNGR;S(0.946)PS(0.027)GS(0.027)QRPSVSDDTEHLVNGR;S(0.821)PS(0.147)GS(0.027)QRPS(0.005)VS(0.001)DDTEHLVNGR 150.59 4.9668e-07 5754490000.0 720285.0 707678.0 628708.0 1034394.0 807137.0 801074.0 883302.0 945139.0 1171665.0 824013.0 True False 680329.3551974511 673680.0866336655 669235.5236483673 1132702.494758103 870654.0899186769 796074.2000226883 972594.7863567763 941860.5334061015 958920.1712710613 816712.8858924134 0.8330092091715469 0.8248677084328631 0.8194256944006715 1.3869041548431198 1.0660467159977798 0.9747295699305962 1.19086499448828 1.1532333451270829 1.1741215154494098 1.0 19.639469464803476 -5.222915194658804 24.66894756824225 1.1342739864957905 0.8256773675383453 0.6316394994146675 0.10826090016243126 300.38629957851055 192351.75401961608 0.0292405649521534 0.05064502759688814 5.985284592084961e-06 5.222915194658804 -0.30859661895744517 S(ph)PSHSGEPFGLPGLEPEPGGPQAGEPPPPLAGDKPHK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSHSGEPFGLPGLEPEPGGPQAGEPPPPLAGDKPHK 37 1 A0A087WVT1;Q96MX3 A0A087WVT1 ZNF48 Zinc finger protein 48 1 S(0.697)PS(0.14)HS(0.163)GEPFGLPGLEPEPGGPQAGEPPPPLAGDKPHK;S(0.333)PS(0.333)HS(0.333)GEPFGLPGLEPEPGGPQAGEPPPPLAGDKPHK;S(0.438)PS(0.438)HS(0.124)GEPFGLPGLEPEPGGPQAGEPPPPLAGDKPHK;S(0.805)PS(0.162)HS(0.033)GEPFGLPGLEPEPGGPQAGEPPPPLAGDKPHK 156.17 9.7539e-08 14323750000.0 4182370.0 4116460.0 3635710.0 3685060.0 3450550.0 3725820.0 3990340.0 4354280.0 4846040.0 3716030.0 True False 3950365.5987521033 3918699.0826675673 3870073.683941675 4035286.9944463093 3722088.654056115 3702565.7753572427 4393722.509165484 4339176.018976589 3966121.294727086 3683108.865227591 1.0725628112836132 1.0639650431363012 1.0507627728518232 1.0956197989539895 1.0105833930668013 1.0052827409782386 1.1929385391365517 1.1781286347365292 1.0768406364990808 1.0 21.812492610331244 -6.751777983761675 24.99994279795911 1.1268210127658533 1.0507845817453176 0.20812720101023174 0.0565069837602788 253.92036976518958 657048.4676954286 0.0214751765739314 0.01642438813231306 1.771014089321981e-07 6.751777983761675 -0.0760364310205357 S(ph)PSHTRPR ddPTM_KYSE-520_SHP099_60min_R1 9 SPSHTRPR 8 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.989)PS(0.011)HTRPR;S(1)PSHTRPR;S(0.946)PS(0.051)HT(0.003)RPR;S(0.957)PS(0.037)HT(0.006)RPR;S(0.972)PS(0.028)HTRPR;S(0.996)PS(0.004)HTRPR;S(0.518)PS(0.374)HT(0.108)RPR;S(0.778)PS(0.22)HT(0.002)RPR;S(0.915)PS(0.082)HT(0.003)RPR 76.17 0.014372 44138330000.0 3657697.0 2911533.0 1865069.0 2551538.0 3039215.0 3793082.0 2842499.0 2718493.0 2824927.0 5739333.0 True False 3454797.2559718057 2771658.5843798663 1985294.331955912 2794035.404372125 3278383.92973211 3769407.9682656713 3129846.5390368695 2709063.1822840353 2311991.467414529 5688486.974753502 0.6073314874947942 0.48724003354160267 0.3490021759330723 0.49117373684294996 0.5763191415014485 0.6626380591174704 0.5502072085121535 0.47623615810448905 0.4064334642367207 1.0 22.439613544476504 -10.675856862163153 2.9447372069184397 1.0541375273477043 0.5121341441285873 0.7347716428241859 0.08798615282085157 56348624.016595684 56667074.75021676 22986369.365035985 0.023891197585134145 2.1093232410036547e-11 10.675856862163153 -0.542003383219117 S(ph)PSISNMAALSR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSISNMAALSR 12 0 Q9H1A4 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 S(0.993)PS(0.007)ISNMAALSR;S(0.999)PS(0.001)ISNMAALSR 100.18 0.0014292 707600000.0 177446.0 174901.0 192380.0 222513.0 182114.0 155859.0 130756.0 168818.0 198442.0 163883.0 True False 167602.71665016862 166498.49342824682 204781.12261888335 243660.5686190272 196445.33571308164 154886.22616803963 143974.09253558426 168232.4097604172 162409.93511572998 162431.1241190446 1.0318386796814494 1.0250405784683314 1.2607258844604237 1.5000854666279975 1.2094069826735194 0.9535501709298314 0.886370104968717 1.0357153573419888 0.9998695508423676 1.0 17.309468574385594 -6.257683882632762 22.587220241095267 0.971787545731769 1.214841416920233 0.44270748499955526 0.1289625907895806 89.80186740961689 540108.5685821542 0.04905927001187975 0.04717517469135356 5.52479435633919e-07 6.257683882632762 0.2430538711884641 S(ph)PSKPDFLYK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSKPDFLYK 10 1 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 S(0.983)PS(0.017)KPDFLYK;S(0.987)PS(0.013)KPDFLYK 122.64 0.00031521 1594110000.0 3983300.0 3261700.0 3158300.0 3280800.0 3422500.0 3236500.0 3214600.0 3634700.0 3732600.0 3262700.0 True False 3762338.408488313 3105003.036088485 3361889.071458669 3592606.2455915157 3691831.2786387797 3216299.802981281 3539563.139472669 3622092.074045357 3054853.9311888274 3233795.016342187 1.1634436906096703 0.9601731156109637 1.0396110620707715 1.1109567017810509 1.1416404750399693 0.994589881772811 1.0945539595383331 1.120074728218977 0.9446652975067779 1.0 21.624796801543535 -7.767846634971734 24.99964922154036 0.9723326157062266 1.0738885359677468 0.3159071530009172 0.06202428806806847 204.29525779194984 797074.9825219327 0.05451172464722265 0.015412727838148104 1.7066849745522684e-08 7.767846634971734 0.10155592026152016 S(ph)PSKPLPEVTDEYK ddPTM_KYSE-520_SHP099_60min_R1 3 SPSKPLPEVTDEYK 14 1 P05455;E9PGX9;E9PFL9;E7ERC4 P05455 SSB Lupus La protein 1 S(0.977)PS(0.023)KPLPEVTDEYK;S(0.993)PS(0.007)KPLPEVTDEYK;S(0.998)PS(0.002)KPLPEVTDEYK 229.6 8.2741e-15 4849900000.0 3724590.0 2843220.0 2433740.0 3100840.0 3143710.0 3077830.0 3043220.0 3478880.0 3439440.0 2938560.0 True False 3517979.567913908 2706627.4434397756 2590622.7745216778 3395542.901298463 3391102.091736889 3058620.1213069297 3350858.3765650564 3466812.5772566986 2814924.3972266293 2912526.644565085 1.2078789303021922 0.9293056420584076 0.8894760771908833 1.1658409744112417 1.1643162468796118 1.0501603914987223 1.1504987886781808 1.1903110255578049 0.9664888053400006 1.0 21.473839817307773 -5.280812380224866 24.971957221244317 1.109088962573837 1.000928735958172 0.12456802879366402 0.10519999199609632 1332.8569855883368 1718061.0811132835 0.029215057877397872 0.043400376904194814 5.238266863384006e-06 5.280812380224866 -0.10816022661566493 S(ph)PSKPLPEVTDEYKNDVK ddPTM_KYSE-520_SHP099_60min_R1 5 SPSKPLPEVTDEYKNDVK 18 2 P05455;E9PGX9;E9PFL9;E7ERC4 P05455 SSB Lupus La protein 1 S(0.983)PS(0.017)KPLPEVTDEYKNDVK;S(0.941)PS(0.059)KPLPEVTDEYKNDVK;S(0.989)PS(0.011)KPLPEVTDEYKNDVK;S(0.933)PS(0.066)KPLPEVTDEYKNDVK;S(0.992)PS(0.008)KPLPEVTDEYKNDVK 174.99 8.1487e-09 26580100000.0 9856090.0 8617380.0 7470640.0 7923630.0 7166820.0 7379430.0 7176840.0 7863080.0 9965920.0 6919970.0 True False 9309353.04007169 8203388.129848921 7952209.4078466175 8676689.412873771 7730807.960372238 7333372.240109429 7902345.026408582 7835804.810736677 8156360.148398805 6858664.449455201 1.357312798822102 1.1960620307792627 1.1594399268910551 1.2650698218022578 1.1271593788184686 1.0692128612141005 1.1521696511973674 1.14246802252574 1.1892053049842208 1.0 22.709496244886612 -1.0000000000000002 0.40606665501689315 1.1136806061871711 4.763904821044577 0.5573195949018758 0.06208669902309876 60.79444588944069 0.8000752923920692 0.0439594162792356 178.3429292298789 0.09999999999999995 1.0000000000000002 3.6502242148574062 S(ph)PSKPPGPNR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSKPPGPNR 10 1 Q92766-5;Q92766-3;Q92766;Q92766-2;C9JU34;Q92766-6;C9JE09;C9JPJ6 Q92766-5 RREB1 Ras-responsive element-binding protein 1 1 S(0.995)PS(0.005)KPPGPNR;S(0.998)PS(0.002)KPPGPNR 96.745 0.0017317999999999997 537200000.0 631120.0 553720.0 468230.0 498660.0 567340.0 541770.0 583850.0 604560.0 557810.0 722120.0 True False 596110.5154934711 527118.4600493351 498412.85499448865 546052.4964724046 611986.4302769683 538388.6124706224 642871.2558268904 602462.9224653655 456525.76524579147 715722.578600859 0.8328792933412644 0.7364843248061009 0.6963771577093718 0.7629387597913474 0.8550609531884813 0.7522308623029602 0.8982129040607002 0.8417548090254455 0.6378529599251118 1.0 19.449040966906445 -5.638834675474354 6.501925256608271 0.8221494652820585 0.7496796510248038 0.12473844871560757 0.0936498556409592 0.4780489374303931 25.35637524839174 0.026889642763169727 0.034773048638515935 2.297022898108116e-06 5.638834675474354 -0.07246981425725463 S(ph)PSKPTLAYPESNSR ddPTM_KYSE-520_SHP099_60min_R1 4 SPSKPTLAYPESNSR 15 1 F5GXS6;F5H6R3;F5H0C6;F5H1B0;F5GYW0;Q86XR8-3;Q86XR8-2;Q86XR8-4;Q86XR8-5;Q86XR8 F5GXS6 CEP57 Centrosomal protein of 57 kDa 1 S(0.986)PS(0.014)KPTLAYPESNSR;S(0.973)PS(0.027)KPTLAYPESNSR;S(0.959)PS(0.041)KPTLAYPESNSR;S(0.986)PS(0.014)KPTLAYPESNSR 106.14 0.00060162 3311310000.0 1237890.0 1063170.0 998470.0 902460.0 926310.0 946680.0 958170.0 906420.0 1183030.0 900120.0 True False 1169221.774027464 1012093.7173492949 1062832.9738084844 988229.5270655078 999205.3270170594 940771.4189668848 1055031.174438043 903275.8405800192 968221.5737593969 892145.637082764 1.3105727646112961 1.1344489904795707 1.1913222792680493 1.107699781278906 1.1200024810796263 1.0545043094568314 1.1825772952137055 1.0124757696889601 1.0852730019791326 1.0 19.766919714567358 -1.0000000000000002 0.2689386635075921 1.0386885699059791 2.6654034171109515 0.6543570959889182 0.05163539371587881 32.164393298324775 0.44868262359961697 0.057459956985066035 24.258230622168938 0.09999999999999995 1.0000000000000002 1.6267148472049724 S(ph)PSLAK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSLAK 6 0 O15018-2;O15018;A6PVK7;Q5SW96;Q5VXU9-3;Q5VXU9 O15018-2 PDZD2;C9orf84;LDLRAP1 PDZ domain-containing protein 2;Processed PDZ domain-containing protein 2;Low density lipoprotein receptor adapter protein 1;Uncharacterized protein C9orf84 1 S(0.892)PS(0.108)LAK;S(0.961)PS(0.039)LAK;S(0.695)PS(0.305)LAK;S(0.944)PS(0.056)LAK 75.692 0.032175 4645850000.0 6875700.0 6147900.0 5786390.0 6276500.0 6601400.0 6746700.0 7039600.0 6819300.0 8189800.0 7544200.0 True False 6494291.214631858 5852545.6558139585 6159389.957951341 6873016.672901459 7120892.623171958 6704591.342738709 7751231.46787526 6795645.439936582 6702738.768057194 7477364.257298777 0.8685267951594942 0.7827016919900878 0.8237381176046171 0.9191763884168938 0.952326565637235 0.8966516959761922 1.0366261694833385 0.908828994562254 0.8964039382613387 1.0 22.83409838448499 -5.327266991120419 3.43166461966597 0.9451014296594219 0.8192735139063416 0.5881840005529104 0.04614997920611904 0.1670897320072484 3.8877141813175102 0.013219663128822268 0.021289390846186314 4.706878727553116e-06 5.327266991120419 -0.12582791575308028 S(ph)PSLDNPTPFPNLGPSENPLKR ddPTM_KYSE-520_SHP099_60min_R1 5 SPSLDNPTPFPNLGPSENPLKR 22 1 M0R0R8;M0R0X9;M0QXC8;M0QX56;M0R3C2;M0QYT9;M0R205;M0QZB8;M0QZB7;Q14653-3;Q14653-2;Q14653;Q14653-4 M0R0R8 IRF3 Interferon regulatory factor 3 1 S(0.5)PS(0.5)LDNPTPFPNLGPSENPLKR;S(0.5)PS(0.5)LDNPTPFPNLGPSENPLKR;S(0.5)PS(0.5)LDNPTPFPNLGPSENPLKR;S(0.912)PS(0.088)LDNPTPFPNLGPSENPLKR;S(0.971)PS(0.029)LDNPTPFPNLGPSENPLKR 184.53 1.0737999999999999e-13 6014380000.0 1761330.0 1721000.0 1561480.0 1471360.0 1491090.0 1809490.0 1561230.0 1590950.0 1822820.0 1686220.0 True False 1663625.5137756942 1638320.5767263337 1662135.4992563338 1611197.6120194865 1608430.2998584355 1798196.301713763 1719054.3645364656 1585431.3657805203 1491841.837552812 1671281.4026593072 0.9954191503169777 0.9802781112261962 0.9945276101388907 0.9640492674996463 0.9623934648582433 1.0759386772643502 1.0285846308115096 0.9486322071542326 0.8926335416519475 1.0 20.672523237517282 -7.391664047538025 6.343937373874264 0.9383385894118113 0.9991110614771899 0.2692885804954981 0.039557390422277426 0.305282132537809 14.305452177933017 0.02298624965559335 0.010824174265630399 4.058223416368103e-08 7.391664047538025 0.06077247206537861 S(ph)PSLESLSRPPSLGFGDTR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSLESLSRPPSLGFGDTR 19 1 Q5M775-4;Q5M775;J3KSG2 Q5M775-4 SPECC1 Cytospin-B 1 S(0.573)PS(0.427)LESLSRPPSLGFGDTR;S(0.917)PS(0.083)LESLSRPPSLGFGDTR 113.73 2.828e-05 878370000.0 1068040.0 895990.0 765960.0 820870.0 824850.0 857430.0 915110.0 972690.0 1107100.0 949500.0 True False 1008793.6921150438 852945.2954915914 815335.0071793322 898885.2379964348 889761.0022454929 852078.4613224907 1007618.2494129394 969315.9654175532 906078.547719862 941088.1686998209 1.071943868456834 0.9063394099088452 0.8663747290604817 0.9551551787526005 0.9454597686365136 0.9054183121860906 1.0706948434013728 1.0299948481519334 0.9627987874628929 1.0 19.843970366983847 -6.752560380999033 24.99810272576578 1.0183716945089754 0.9375183119555942 0.2907727521481541 0.0563976870520026 232.9857113260547 655953.6828308532 0.021943740876390897 0.016742429131427424 1.767826415518878e-07 6.752560380999033 -0.08085338255338115 S(ph)PSLGSDLTFATR ddPTM_KYSE-520_SHP099_60min_R1 8 SPSLGSDLTFATR 13 0 Q13425 Q13425 SNTB2 Beta-2-syntrophin 1 S(0.957)PS(0.043)LGSDLTFATR;S(0.958)PS(0.041)LGS(0.001)DLTFATR;S(0.972)PS(0.028)LGSDLTFATR;S(0.945)PS(0.055)LGSDLTFATR;S(0.99)PS(0.007)LGS(0.002)DLTFATR;S(0.995)PS(0.005)LGS(0.001)DLTFATR;S(0.988)PS(0.012)LGSDLTFATR;S(0.918)PS(0.08)LGS(0.002)DLTFATR 179.41 2.1309e-07 15199780000.0 5892460.0 6541720.0 5757680.0 8449900.0 6472430.0 5557620.0 6713390.0 6624900.0 7968610.0 6330000.0 True False 5565593.497472211 6227445.951878087 6128829.265413725 9252975.955444919 6981773.41791089 5522932.832085529 7392044.977572464 6601919.768163282 6521711.296311041 6273921.124665478 0.8870996920237765 0.9925923243432759 0.9768738152156018 1.474831412697794 1.1128245445200993 0.8803000105265124 1.1782177095773743 1.0522796887274053 1.0394952640815636 1.0 22.580935961150054 -5.028741344039417 24.91718624271175 1.111122029453417 0.9510675103118579 0.1866057854437061 0.14724984234253202 1118.2286985224046 969443.5460141832 0.04143604550470239 0.07195509956329 9.359629465215359e-06 5.028741344039417 -0.1600545191415591 S(ph)PSLLQS(ph)GAK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSLLQSGAK 10 0 I3L1L3;Q9BQG0;Q9BQG0-2;I3L2H8 I3L1L3 MYBBP1A Myb-binding protein 1A 2 S(0.999)PS(0.001)LLQS(1)GAK;S(1)PSLLQS(1)GAK 174.95 3.2174e-05 531500000.0 1421200.0 1388170.0 1420570.0 1512860.0 1227750.0 1223630.0 1347100.0 1482420.0 1603660.0 1501790.0 True False 1342363.2029080396 1321480.2295143497 1512142.215192364 1656641.7595420545 1324366.9400580742 1215992.8712874975 1483278.0144290526 1477277.8310194302 1312475.7689788037 1488485.3089749387 0.9018316773529141 0.887801996799284 1.0158932749116059 1.1129715218236977 0.8897413579245291 0.816933068775065 0.9965016150885143 0.9924705484911862 0.8817525850373721 1.0 20.50541355188528 -10.018592920325723 3.643720049893549 1.0000137623696341 0.9470590100862359 0.03937715306217304 0.08173848856579927 234478261.7402182 382940693.08427435 39809.840403402995 0.021721826389042506 9.58091703989886e-11 10.018592920325723 -0.05295475228339819 S(ph)PSLLQSGAK ddPTM_KYSE-520_SHP099_60min_R1 5 SPSLLQSGAK 10 0 I3L1L3;Q9BQG0;Q9BQG0-2;I3L2H8 I3L1L3 MYBBP1A Myb-binding protein 1A 1 S(0.994)PS(0.006)LLQSGAK;S(0.983)PS(0.017)LLQSGAK;S(0.973)PS(0.026)LLQS(0.001)GAK;S(0.99)PS(0.008)LLQS(0.002)GAK;S(0.997)PS(0.003)LLQSGAK 145.15 0.00020044 6477790000.0 6865300.0 6134990.0 5653850.0 6034200.0 6048200.0 5926350.0 5963270.0 7103500.0 7438800.0 6626700.0 True False 6484468.12336375 5840255.871592273 6018306.2174798455 6607688.553751614 6524158.930449394 5889361.451382094 6566095.527506755 7078859.61646936 6088101.436887813 6567992.593494581 0.987283105310813 0.889199521536746 0.9163083136605262 1.0060438497291166 0.99332617045144 0.8966760189734908 0.999711165023282 1.077781303145923 0.9269348815828313 1.0 22.647021069561898 -6.0227090515969675 0.6205744364338661 1.001971976104114 0.9310225132580691 0.12226439010827006 0.053146134168108615 1.6590643488232886 1.404361982110743 0.04110449627459504 0.05822072157870573 9.490540534371981e-07 6.0227090515969675 -0.07094946284604486 S(ph)PSLS(ph)PSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 S(0.999)PS(0.003)LS(0.998)PS(0.139)PPS(0.861)PLEK;S(1)PSLS(1)PS(0.001)PPS(0.999)PLEK;S(0.998)PS(0.008)LS(0.989)PS(0.045)PPS(0.959)PLEK;S(0.987)PS(0.013)LS(1)PS(0.001)PPS(0.999)PLEK 221.78 7.4103e-14 1119790000.0 2069590.0 1743840.0 1591510.0 1976740.0 1945730.0 1958980.0 1856100.0 2037290.0 2039520.0 2016710.0 True False 1954785.7170746163 1660063.3088427975 1694101.2811060345 2164608.775271447 2098847.881310687 1946753.2791732657 2043732.7017903386 2030223.11649706 1669194.5801152661 1998843.5183766403 0.9779583539696967 0.8305118902909504 0.8475407231887256 1.0829305822946225 1.050031111497545 0.9739398113336657 1.022457577594746 1.0156988767914683 0.8350801674915012 1.0 20.93073410288819 -5.245876516953983 24.989325843709945 1.0001059088041098 0.8798544725151451 0.33809249129614083 0.0714958807561478 891.310205106321 1431176.7961373262 0.019524200953038178 0.03367313140345636 5.677059984349986e-06 5.245876516953983 -0.12025143628896462 S(ph)PSLSLAPLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 SPSLSLAPLSPR 12 0 G3V160;Q969H4-2;Q969H4 G3V160 CNKSR1 Connector enhancer of kinase suppressor of ras 1 2 S(1)PS(0.001)LSLAPLS(0.999)PR;S(0.998)PS(0.002)LSLAPLS(1)PR;S(0.999)PS(0.001)LSLAPLS(1)PR;S(0.999)PS(0.001)LSLAPLS(1)PR;S(1)PSLSLAPLS(1)PR;S(0.998)PS(0.002)LSLAPLS(1)PR;S(0.999)PS(0.001)LSLAPLS(1)PR 293.59 9.7647e-30 5720960000.0 2276640.0 2246710.0 2447390.0 2566660.0 2737750.0 3348500.0 3107650.0 3512700.0 4248530.0 3479150.0 True False 2150350.2408306743 2138774.679219535 2605152.675362451 2810594.59470553 2953195.3493333287 3327600.7694369913 3421801.5897412547 3500515.263570345 3477104.0487257335 3448327.4377377382 0.6235922428066759 0.6202353801478522 0.755482976138586 0.8150602416542582 0.856413841972838 0.9649897898385342 0.9923076191355291 1.01513424312943 1.00834509236944 1.0 21.71746534211881 -5.399458834109414 0.6570266452699921 1.0211616656010902 0.5593037895529189 0.9793738766520051 0.021314918278460257 0.13629681860223228 0.10701269299401552 0.01271043764007182 0.0390501904821037 3.986035533428426e-06 5.399458834109414 -0.4618578760481713 S(ph)PSLSLAPLSPR ddPTM_KYSE-520_SHP099_60min_R1 5 SPSLSLAPLSPR 12 0 G3V160;Q969H4-2;Q969H4 G3V160 CNKSR1 Connector enhancer of kinase suppressor of ras 1 1 S(0.997)PS(0.003)LSLAPLSPR;S(1)PSLSLAPLSPR;S(0.989)PS(0.011)LSLAPLSPR;S(0.843)PS(0.157)LSLAPLSPR;S(0.998)PS(0.002)LSLAPLSPR 217.42 8.914700000000001e-11 3573240000.0 2022236.0 1797284.0 1630439.0 1246996.0 1270330.0 1056470.0 956013.0 1010336.0 1305899.0 1104984.0 True False 1910058.5378524766 1710939.7788617143 1735539.7067346366 1365510.1249169814 1370297.7438110155 1049876.1788523516 1052656.123827751 1006831.3802301948 1068780.6606348278 1095194.7014245423 1.7440355905374854 1.5622243027986344 1.584685996450845 1.2468195135904458 1.2511909909978938 0.9586205790502419 0.9611588902489571 0.9193172491800667 0.9758818767518166 1.0 20.062755941259955 -5.500284577696785 0.8701998886389108 0.9386861542392717 1.7285495707571557 0.9543405363502107 0.062668559557854 0.12296909556508204 0.18735410770223018 0.027908899028059698 0.06476530965727607 3.1602062110611134e-06 5.500284577696785 0.7898634165178839 S(ph)PSLSSK ddPTM_KYSE-520_SHP099_60min_R1 8 SPSLSSK 7 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3;Q9UPU5 A9Z1X7;Q8IYB3;Q9UPU5 SRRM1;USP24 Serine/arginine repetitive matrix protein 1;Ubiquitin carboxyl-terminal hydrolase 24 1 S(0.997)PS(0.003)LSSK;S(0.99)PS(0.01)LSSK;S(0.993)PS(0.007)LSSK;S(0.94)PS(0.06)LSSK;S(0.998)PS(0.002)LSSK;S(0.992)PS(0.008)LSSK;S(0.968)PS(0.032)LS(0.001)SK;S(0.98)PS(0.02)LSSK 124.74 0.0023103999999999998 70973900000.0 66243700.0 53145700.0 47266400.0 56388500.0 57132900.0 59099400.0 57970800.0 54311300.0 60249300.0 57165600.0 True False 62569029.90745803 50592500.79867796 50313267.77291399 61747646.086179264 61628934.1882663 58730538.72279072 63831054.20448654 54122906.776652694 49309545.881255776 56659157.25816388 1.1043056927650052 0.8929271674154351 0.8879988726917479 1.0898087630359556 1.0877135695375408 1.036558635265059 1.1265796614948642 0.9552367065758688 0.870283785842065 1.0 25.75580580760581 -3.155450273722537 14.312616271674775 1.0064183872732064 83.47918994968315 0.0 0.09305309270712096 0.0 0.0 0.022351421983374833 0.0 0.0006991167803413319 3.155450273722537 82.47277156240995 S(ph)PSMISNDSETLEECMVCSDMKR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSMISNDSETLEECMVCSDMKR 23 1 Q86YT6 Q86YT6 MIB1 E3 ubiquitin-protein ligase MIB1 1 S(0.499)PS(0.499)MIS(0.002)NDSETLEECMVCSDMKR 71.535 0.0039106 0.0 39807.0 43667.0 29995.0 27228.0 33395.0 29461.0 21949.0 30634.0 35206.0 29694.0 True False 37598.82635671286 41569.17177449671 31928.52569369685 29815.740933603312 36022.996508441785 29277.122970996934 24167.819121596985 30527.737804029366 28813.47787103733 29430.93426158242 1.27752744858638 1.4124312672180068 1.0848627980992998 1.0130749050845864 1.2239841313996034 0.9947738223592085 0.8211706399393639 1.0372670311006285 0.9790201566468419 1.0 14.845045719760423 -4.89093609705192 0.691404372139235 0.969243740510099 1.4425967628999832 0.5968987508387151 0.1037917654524583 1.0850641515663622 0.6770825767304216 0.05257450258275948 0.35677944993865673 1.2854757934764317e-05 4.89093609705192 0.4733530223898842 S(ph)PSMPSLNQTWPELNQSSEQWETFSER ddPTM_KYSE-520_SHP099_60min_R1 2 SPSMPSLNQTWPELNQSSEQWETFSER 27 0 Q96D71;Q96D71-3 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.479)PS(0.479)MPS(0.019)LNQT(0.023)WPELNQSSEQWETFSER;S(0.499)PS(0.499)MPS(0.002)LNQTWPELNQSSEQWETFSER 100.29 0.0020106 182893000.0 60167.0 68863.0 83507.0 35754.0 70443.0 74127.0 55171.0 51605.0 71538.0 71602.0 True False 56829.4165700591 65554.71811452966 88889.99483592424 39152.04941016793 75986.46333415672 73664.34589698554 60748.22309707173 51425.994299697544 58548.502526224715 70967.66198551298 0.8007790447099694 0.9237266140726421 1.2525422473981156 0.5516885904760431 1.0707195532194405 1.0379987706516673 0.8559986534355971 0.7246398269425223 0.8250025559271847 1.0 16.11487415739258 -6.9824584530492295 23.645359185974115 0.8229565478777915 0.941876672331898 0.0467662987582127 0.18326278873196694 336.4704409871252 453547.1863800209 0.07544987472200777 0.050852383423929726 1.0412177113568634e-07 6.9824584530492295 0.11892012445410649 S(ph)PSPAPPPRR ddPTM_KYSE-520_SHP099_60min_R1 4 SPSPAPPPRR 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.998)PS(0.002)PAPPPRR;S(0.99)PS(0.01)PAPPPRR;S(0.998)PS(0.002)PAPPPRR;S(0.905)PS(0.095)PAPPPRR 140.14 0.00015921 1515910000.0 646955.0 593901.0 507057.0 609993.0 634881.0 723046.0 643066.0 632253.0 1058850.0 524685.0 True False 611067.1164771817 565369.1044964242 539742.7055398844 667966.5513189171 684842.522721247 718533.2017137051 708073.3869993577 630059.8619119598 866589.5314363422 520036.69909875246 1.1750461410438708 1.0871715505390964 1.0378934918925593 1.284460409191378 1.3169119100788669 1.3816971051446103 1.3615834963695477 1.2115680739530164 1.6664007231377742 1.0 18.988253912574272 -5.395618662320085 4.305711101348539 1.335871939897872 1.0997831370592095 0.2830614677470029 0.15838345665784126 0.26920622171092246 8.14014384062129 0.042805478874886345 0.06474717457498516 4.021437632100138e-06 5.395618662320085 -0.23608880283866251 S(ph)PSPAVPLR ddPTM_KYSE-520_SHP099_60min_R1 5 SPSPAVPLR 9 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 S(0.971)PS(0.029)PAVPLR;S(0.983)PS(0.017)PAVPLR;S(0.695)PS(0.305)PAVPLR;S(0.951)PS(0.049)PAVPLR;S(0.765)PS(0.235)PAVPLR 134.68 0.0004977 2375610000.0 1978900.0 1984170.0 1755240.0 1426270.0 1602770.0 1894180.0 1599080.0 1870220.0 2151060.0 1816020.0 True False 1869126.4721606518 1888847.4949001109 1868385.5788832954 1561822.2719762884 1728898.880486159 1882357.7200096054 1760730.6119168657 1863732.6433326313 1760481.7278098478 1799931.4756421805 1.0384431282273032 1.0493996690769614 1.0380315051808802 0.8677120729938125 0.9605359447749651 1.045794101321561 0.9782209132648626 1.0354464425750918 0.9780826390525462 1.0 20.779510552749677 -5.039388323080381 24.99932542653757 0.9816583583048074 1.0438701445963463 0.27384977379867514 0.04567002254928219 707.2747524976993 448899.0418797772 0.013113980465573606 0.022719913874968602 9.132962552234014e-06 5.039388323080381 0.062211786291538895 S(ph)PSPFT(ph)HTHLAQGYR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPFTHTHLAQGYR 15 0 P38398;P38398-4;P38398-8;P38398-7;Q5YLB2 P38398 BRCA1 Breast cancer type 1 susceptibility protein 2 S(0.984)PS(0.069)PFT(0.945)HT(0.002)HLAQGYR 75.143 0.017740000000000002 232610000.0 232570.0 225240.0 223950.0 219550.0 219330.0 234730.0 209290.0 228450.0 242560.0 238190.0 True False 219668.87848319908 214419.13230786717 238386.17533266934 240415.96598988568 236590.02318300787 233264.96300132747 230447.07567356274 227657.5602706309 198517.21844000497 236079.821909016 0.9304856158687649 0.9082484499268355 1.0097693797165868 1.0183672795320085 1.0021611388464555 0.988076664558086 0.9761405011664906 0.9643245171472935 0.8408902414222954 1.0 17.84891521199729 -9.365953651988775 7.524930726590563 0.9999977263797243 0.9641905675130699 0.045890180511235834 0.05161025840704759 0.0 0.0 0.052365043806459566 0.01270038862965463 4.305725588465613e-10 9.365953651988775 -0.03580715886665442 S(ph)PSPKPR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPKPR 7 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.607)PS(0.393)PKPR 71.692 0.031656000000000004 0.0 672590.0 454310.0 440900.0 458170.0 689360.0 819950.0 628470.0 525580.0 804640.0 757520.0 True False 635280.091925076 432484.2656667873 469321.11946494284 501714.3390461671 743608.7100781382 814832.3879049901 692001.8808761246 523756.8856512946 658537.6593237373 750808.9621416423 0.8461274757735624 0.5760243783360671 0.6250872633781961 0.6682316865465402 0.9904100078361268 1.0852725912870358 0.9216750408815397 0.6975900822458301 0.8771041536921641 1.0 19.518086345649998 -5.7515868859282016 24.980202579768225 0.9210346662623536 0.667680215614479 0.5302275232833555 0.11486472145032893 174.69170679845487 442914.48775125266 0.03699049038658147 0.047161415385257095 1.7717935406848194e-06 5.7515868859282016 -0.25335445064787465 S(ph)PSPKPT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 5 SPSPKPTK 8 1 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 2 S(0.995)PS(0.016)PKPT(0.989)K;S(0.999)PS(0.288)PKPT(0.713)K;S(0.738)PS(0.262)PKPT(1)K;S(0.994)PS(0.263)PKPT(0.743)K;S(0.969)PS(0.04)PKPT(0.991)K 130.44 0.0014269999999999999 23393720000.0 15903200.0 11879300.0 13098900.0 12588400.0 10997100.0 13807000.0 16552800.0 9908690.0 14491500.0 13159900.0 True False 15021017.793756772 11308600.596807184 13943276.052981019 13784797.751159538 11862509.205060184 13720825.391553389 18226118.563760113 9874319.067095619 11860208.900986688 13043313.52424727 1.1516259090018028 0.8670036625114249 1.0689979986343758 1.0568478420405876 0.9094705254924683 1.0519432325265077 1.3973534048597474 0.7570406897556705 0.9092941666194551 1.0 23.636807082687028 S(ph)PSPLVSLQAVK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPLVSLQAVK 12 0 Q9UPZ3-2;Q9UPZ3 Q9UPZ3-2 HPS5 Hermansky-Pudlak syndrome 5 protein 1 S(0.87)PS(0.13)PLVSLQAVK 233.59 3.5833e-15 268920000.0 372280.0 406850.0 260920.0 225540.0 255070.0 368560.0 285630.0 301070.0 382530.0 340620.0 True False 351628.886278219 387304.31530570023 277739.3206867604 246975.25378892617 275142.55785022484 366259.68032960966 314504.26788016513 300025.65844026604 313072.1947965658 337602.3717983498 1.0415474405738099 1.147220362352897 0.8226817815505585 0.7315566311733281 0.8149900025423037 1.0848847962133896 0.9315819264090326 0.8886953514043191 0.9273400335693261 1.0 18.36496551405566 -4.758055075696093 24.99989032100502 0.8948892916326842 1.0943839410192373 0.3913995961766651 0.09666598855845349 88.88928709545138 656596.8528932133 0.02696496820988436 0.06560097630441958 1.745600767943863e-05 4.758055075696093 0.19949464938655315 S(ph)PSPPLPTHIPPEPPRT(ph)PPFPAK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPPLPTHIPPEPPRTPPFPAK 23 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 2 S(0.509)PS(0.445)PPLPT(0.046)HIPPEPPRT(1)PPFPAK 130.32 0.00062489 405660000.0 124050.0 111140.0 109250.0 140750.0 109410.0 111360.0 111380.0 116820.0 133090.0 107610.0 True False 117168.69921245592 105800.66757545885 116292.42980618052 154126.83768196942 118019.94454225547 110664.96093310553 122639.37736404716 116414.77868599293 108924.21092587501 106656.65911931323 1.098559622811579 0.9919743263015879 1.0903438263155052 1.44507468126817 1.10654079657821 1.0375813554154958 1.1498520427763876 1.0914909546881983 1.0212602928432732 1.0 16.702614517738308 -7.693934448938112 1.3581573170032637 0.994902061075341 1.1351776030207341 0.14806502820169853 0.11432990903558546 0.8843989859921089 3.1577705562866147 0.11519630206438837 0.03664411490323848 2.0233245499628778e-08 7.693934448938112 0.14027554194539316 S(ph)PSPPPTRR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPPPTRR 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.5)PS(0.5)PPPTRR 52.247 0.043887 0.0 62785.0 68120.0 49764.0 57462.0 52599.0 69756.0 74815.0 68290.0 106130.0 46150.0 True False 59302.19089120546 64847.41294979549 52971.86706521524 62923.17120341971 56738.242052628535 69320.6269293256 82378.03032403656 68053.1179290059 86859.46731958173 45741.1469041567 1.296473632711129 1.417704131592348 1.1580791180468073 1.3756360621054213 1.240420188228216 1.5154982247073068 1.80096118920338 1.4877877476837293 1.898935055161208 1.0 15.481204919592763 -6.393460932039979 4.792398095006235 1.59594307863273 1.3020342353135363 0.20139030575010008 0.23349779732000575 0.30375870871904775 10.541027661057687 0.07815834354425334 0.06820311208876434 4.041467288277803e-07 6.393460932039979 -0.29390884331919365 S(ph)PSPRPNMPVR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPRPNMPVR 11 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 S(0.935)PS(0.065)PRPNMPVR 71.241 0.035472000000000004 407580000.0 281920.0 256890.0 222880.0 241970.0 227440.0 231840.0 225240.0 246770.0 268880.0 231860.0 True False 266281.33560641314 244548.6188002489 237247.20142060897 264966.75604906667 245338.23404341956 230393.00056331855 248009.45733056188 245914.01246655118 220058.16991321126 229805.90078435052 1.1587227947479517 1.0641529132436547 1.0323808075025946 1.1530024039622508 1.0675889226780324 1.0025547637243613 1.0792127464267924 1.0700944215410573 0.957582765116695 1.0 17.81005631734261 -1.0000000000000013 0.12149469705107954 0.9624033709436963 1.472176723692415 0.40016173632320573 0.04715629984214334 106.38876264854309 0.888380646999794 0.32150225386720993 9.19514046416889 0.09999999999999969 1.0000000000000013 0.5097733527487187 S(ph)PSPS(ph)PTPEAK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPSPTPEAK 11 0 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 2 S(0.989)PS(0.147)PS(0.858)PT(0.006)PEAK 99.161 0.0018273 322150000.0 1122000.0 1050600.0 1006000.0 1019800.0 1043500.0 973590.0 1044600.0 1029400.0 1350400.0 1045700.0 True False 1059760.4233484508 1000127.599017249 1070848.369656912 1116721.4853859486 1125617.51329717 967513.4636751257 1150198.3623135535 1025829.2516637673 1105201.4008137474 1036435.9115422887 1.022504538434464 0.9649681064495242 1.0332026879147937 1.0774631339473653 1.0860464219366663 0.9335005212578927 1.109763131038154 0.9897662173218815 1.066348038026906 1.0 19.98319947886488 -4.889402560691826 7.976886483037796 1.0391290248913736 0.99404775148111 0.1025390674015646 0.05117128517692502 0.4841862401282914 32.09026364882445 0.012787570297260815 0.02682694240619571 1.290022957948235e-05 4.889402560691826 -0.04508127341026358 S(ph)PSPSFR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPSFR 7 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 S(0.998)PS(0.002)PSFR;S(0.921)PS(0.077)PS(0.002)FR 118.5 0.0026079999999999996 2323350000.0 1025360.0 1038290.0 970090.0 907140.0 1012410.0 1023880.0 858710.0 909500.0 1144180.0 1000820.0 True False 968481.2367955159 988408.9898949374 1032623.5535988789 993354.3128584147 1092080.9071750736 1017489.5851309975 945516.7870019834 906345.1567788963 936425.7544305942 991953.5134261777 0.9763373219480929 0.9964267241526292 1.0409999456851846 1.0014121623778505 1.100939602908466 1.0257432141316976 0.9531865901015832 0.9136972091044946 0.9440218132765191 1.0 19.919912986660883 -6.781736231586813 5.745019944399236 0.9446923699126868 1.0258823011565024 0.46106578414095034 0.03718547884092738 0.14592475457790938 14.793197606645498 0.015900127269582745 0.011064255309472056 1.6529654206761748e-07 6.781736231586813 0.08118993124381557 S(ph)PSPVLR ddPTM_KYSE-520_SHP099_60min_R1 7 SPSPVLR 7 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-2 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(0.989)PS(0.011)PVLR;S(0.965)PS(0.035)PVLR;S(0.783)PS(0.217)PVLR;S(0.92)PS(0.08)PVLR;S(0.979)PS(0.021)PVLR;S(0.915)PS(0.085)PVLR;S(0.694)PS(0.306)PVLR 114.5 0.0027984000000000004 7721240000.0 6231360.0 5759420.0 5453040.0 4566170.0 5030560.0 5480440.0 4861160.0 5212850.0 6672380.0 5303850.0 True False 5885694.038891804 5482728.818134329 5804551.683572486 5000137.423930931 5426436.4520289535 5446234.541093999 5352573.493149687 5194767.840038334 5460843.989011868 5256862.015332858 1.1196211773725109 1.0429660893024542 1.1041856656389617 0.9511639090672096 1.0322577302203277 1.0360238722661526 1.0182069602621608 0.9881879769502392 1.0388029918008213 1.0 22.32577043617088 -5.23996321114264 24.966905238230723 1.011191948558274 1.084328494542906 0.5828380522266776 0.030790441102987415 593.6911811432835 690189.3840505984 0.00803362840085944 0.01389759673332484 5.754886846165306e-06 5.23996321114264 0.07313654598463182 S(ph)PSPVQGK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPVQGK 8 0 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 S(0.703)PS(0.297)PVQGK 86.18 0.0050754 3606800000.0 1417400.0 1143700.0 1187100.0 868360.0 1020800.0 1145000.0 1236100.0 1155800.0 1311600.0 1188300.0 True False 1338773.9964831523 1088754.9352713018 1263622.3654271574 950888.6733180452 1101131.1524425019 1137853.6302838146 1361057.05117345 1151790.7995657476 1073446.5027453443 1177772.5864834103 1.1366999129097235 0.9244186422457861 1.0728916430293873 0.8073618661453189 0.9349267974815544 0.9661063972300581 1.155619571038998 0.9779398950053345 0.9114208592258354 1.0 20.167629568572764 -4.25005660087206 23.993093214790296 0.9739657253494641 1.136700083491184 0.2348113801459345 0.08898733924779999 1563.4441914996912 3295386.0719820387 0.02279175019386239 0.33495407474986405 5.622680409633857e-05 4.25005660087206 0.16273435814171988 S(ph)PSPYYSR ddPTM_KYSE-520_SHP099_60min_R1 8 SPSPYYSR 8 0 P62995;P62995-3;H7C2L4;H7BXF3;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 1 S(0.997)PS(0.003)PYYSR;S(0.999)PS(0.001)PYYSR;S(1)PSPYYSR;S(0.984)PS(0.016)PYYSR;S(0.822)PS(0.177)PYYSR;S(0.999)PS(0.001)PYYSR;S(0.994)PS(0.006)PYYSR;S(0.998)PS(0.002)PYYSR 147.75 0.00046723 15802020000.0 4557024.0 4334304.0 3476484.0 3739147.0 4193810.0 4932884.0 4367840.0 4031727.0 5614760.0 3685850.0 True False 4304236.7945178775 4126077.5299170627 3700583.72121107 4094514.4066644614 4523838.987485199 4902096.041195585 4809383.893210448 4017741.880049153 4595261.120581304 3653196.2365479115 1.1782112199330323 1.1294431677768288 1.0129715135992632 1.1208033025166952 1.2383235650543651 1.3418649653016783 1.316486600170999 1.0997881361680475 1.2578741526690054 1.0 21.800727821488536 -5.715207014304114 5.866953767211182 1.2260991042942067 1.103298777579547 0.17135664153634433 0.10218250546051902 0.28578411011943977 22.82687703761708 0.03060541349037109 0.039065287266823796 1.926606342591932e-06 5.715207014304114 -0.12280032671465957 S(ph)PSQDFSFIEDTEILDSAMYR ddPTM_KYSE-520_SHP099_60min_R1 5 SPSQDFSFIEDTEILDSAMYR 21 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.496)PS(0.496)QDFS(0.008)FIEDTEILDSAMYR;S(0.378)PS(0.378)QDFS(0.243)FIEDT(0.001)EILDSAMYR;S(0.473)PS(0.473)QDFS(0.054)FIEDTEILDSAMYR;S(0.462)PS(0.462)QDFS(0.075)FIEDTEILDSAMYR;S(0.469)PS(0.469)QDFS(0.061)FIEDTEILDSAMYR 166.25 4.6907999999999996e-09 90387000.0 65824.8 67992.4 64653.0 57246.4 55826.9 65046.9 56035.1 64068.2 79815.0 63244.2 True False 62173.36712551437 64725.9430453269 68820.63582845764 62687.080644242254 60220.15941838984 64640.9181691776 61699.67475787509 63845.96236783027 65322.607972415084 62683.90559124303 0.9918553500948419 1.0325767425437695 1.0978996152095526 1.0000506518055836 0.9606957136825666 1.0312203357381096 0.9842985081404143 1.0185383594979693 1.042095372907662 1.0 15.935807450897595 S(ph)PSQESIGAR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSQESIGAR 10 0 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(0.986)PS(0.014)QESIGAR 79.986 0.015786 202730000.0 393490.0 369690.0 428590.0 343130.0 362740.0 414210.0 418160.0 412110.0 442910.0 406640.0 True False 371662.3252971324 351929.5374839967 456217.597168246 375740.97203420347 391285.5742917252 411624.7617466015 460431.6936483211 410680.48659719713 362488.70885250083 403037.485961133 0.9221532444080742 0.8731930645228745 1.1319483002438178 0.9322730146010244 0.9708416410910694 1.021306394776134 1.1424041427568923 1.018963498191335 0.8993920453529664 1.0 18.62055450250807 -6.265370013863348 6.428669065111563 1.0256409046037733 0.9681268360398904 0.07821410225431036 0.08338817823111458 0.3943122180036381 87.33932888790552 0.02983769057495366 0.027800038751600198 5.427876856209205e-07 6.265370013863348 -0.05751406856388297 S(ph)PSRPILDGK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSRPILDGK 10 1 O60890 O60890 OPHN1 Oligophrenin-1 1 S(0.985)PS(0.015)RPILDGK;S(0.993)PS(0.007)RPILDGK;S(0.984)PS(0.016)RPILDGK;S(0.984)PS(0.016)RPILDGK 127.78 0.00026111 3661530000.0 5158340.0 4132230.0 4007640.0 4313800.0 4576410.0 4286840.0 4538730.0 4495770.0 4965790.0 4320030.0 True False 4872196.597304152 3933711.4681963213 4265978.886850724 4723782.255008743 4936547.430788979 4260084.241437441 4997549.122136124 4480175.223190611 4064127.713378931 4281757.895132482 1.1378963305802234 0.9187141273606756 0.9963148294069368 1.1032343188714047 1.152925399262033 0.9949381412434178 1.1671722793615575 1.0463401558233105 0.9491727026413721 1.0 22.029771792565956 -3.897200669481102 20.049133252216105 1.0442344281236355 11.918304541139069 0.1234141605712098 0.07866895051763592 1248.9956181549098 243654.35039922356 0.01948325508266974 153.1865879150565 0.00012670662717672435 3.897200669481102 10.874070113015433 S(ph)PSS(ph)EDDRDER ddPTM_KYSE-520_SHP099_60min_R1 1 SPSSEDDRDER 11 1 Q9BVA0 Q9BVA0 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 2 S(0.993)PS(0.326)S(0.682)EDDRDER 129.76 0.0096337 0.0 205750.0 175290.0 147200.0 167940.0 167680.0 161570.0 140280.0 161510.0 184450.0 167620.0 True False 194336.6373475434 166868.80528434573 156688.74752832754 183900.96710699782 180875.4620313076 160561.58169865163 154460.87140086686 160949.7595067174 150958.52960611373 166135.0172063866 1.1697512096809934 1.0044168176601056 0.9431410076159674 1.1069368168093117 1.0887256947559056 0.9664523734884188 0.9297309742291286 0.9687888935947342 0.9086496762966029 1.0 17.341996664687876 -6.365626319068945 5.431931444128512 0.9493538007765028 1.0549108036549442 0.43706358191699013 0.06095761834059937 0.24364829006070743 10.470996817448281 0.02242350673714941 0.019683908288538467 4.3089720883959913e-07 6.365626319068945 0.10555700287844139 S(ph)PSSDLDTDAEGDDFELLDQSELSQLDPASSR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSSDLDTDAEGDDFELLDQSELSQLDPASSR 32 0 K7EQI9;Q86VR2-2;Q86VR2 K7EQI9 FAM134C Protein FAM134C 1 S(0.311)PS(0.311)S(0.311)DLDT(0.068)DAEGDDFELLDQSELSQLDPASSR 58.861000000000004 0.028524 75139000.0 28291.0 29686.0 19531.0 31422.0 23678.0 23079.0 28342.0 29910.0 33189.0 29803.0 True False 26721.641833289705 28259.84000040557 20789.999510704914 34408.33743263122 25541.32389060893 22934.955400279632 31207.08595126437 29806.249191046463 27162.714226605083 29538.968606383147 0.9046233871386884 0.9566969103416438 0.7038160264746804 1.1648455940061442 0.8646653927209105 0.7764304741271014 1.056471753198612 1.0090484061317415 0.9195552691279623 1.0 14.85033183285481 -6.789193791964469 24.999349354204817 0.9970228603280741 0.9001479286107829 0.15004012710130943 0.1175086586644662 463.8898248697644 417837.08496004436 0.04881961805454558 0.03292225797316195 1.6248235611505707e-07 6.789193791964469 -0.09687493171729122 S(ph)PSSDSWTCADTSTER ddPTM_KYSE-520_SHP099_60min_R1 2 SPSSDSWTCADTSTER 16 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 S(0.99)PS(0.01)SDSWTCADTSTER;S(0.863)PS(0.129)S(0.008)DSWTCADTSTER 173.71 6.1951e-09 707090000.0 1066790.0 1186760.0 970200.0 925360.0 960850.0 936010.0 1014720.0 1050690.0 1300030.0 869280.0 True False 1007613.0321068586 1129746.2682369228 1032740.6443748863 1013305.9361803713 1036463.4285113431 930168.01439472 1117297.8003128574 1047045.4016228899 1063977.3230893794 861578.8554896059 1.1694960080401073 1.3112511536682576 1.1986606191583182 1.1761035333260867 1.2029815052997745 1.079608684066576 1.2968027165405946 1.2152635768061992 1.234915778527036 1.0 19.71662331873095 -11.356531365939459 1.9017225554589414 2.4465637853171144e-05 1.2098801127168866 0.5069258808343425 0.061970368761326416 1219100.2535196806 124028.4463079426 5237306.409764383 0.015517153581087609 4.400161675130692e-12 11.356531365939459 1.2098556470790334 S(ph)PSSEWLVR ddPTM_KYSE-520_SHP099_60min_R1 3 SPSSEWLVR 9 0 Q9NWQ4-4;Q9NWQ4 Q9NWQ4-4 GPATCH2L G patch domain-containing protein 2-like 1 S(0.98)PS(0.017)S(0.002)EWLVR;S(0.973)PS(0.026)S(0.001)EWLVR;S(0.93)PS(0.068)S(0.002)EWLVR 99.568 0.0025951999999999998 2053490000.0 519190.0 687580.0 532850.0 1085860.0 755170.0 523520.0 585840.0 724250.0 872270.0 569030.0 True False 490389.4957203948 654547.6247213791 567198.363590144 1189059.8079242865 814597.5826704585 520252.5174901161 645062.4244474176 721737.7457912199 713887.7561372983 563988.8368986417 0.8695021313135071 1.1605684047236071 1.0056907627979863 2.1083037998817353 1.4443505427339787 0.922451799491227 1.1437503408659597 1.2797021830432582 1.2657834861820076 1.0 19.10530708190068 -10.218352635901807 7.123310115995964 0.9999993107456834 1.2548567113716926 0.04551989730293915 0.3327651266225476 3.8388471538796656e-06 4.208413731824661e-07 0.33953976248136286 0.08235026642040008 6.048495530963527e-11 10.218352635901807 0.25485740062600926 S(ph)PSSGSGGGGPKPYK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSSGSGGGGPKPYK 15 1 Q9ULD5 Q9ULD5 ZNF777 Zinc finger protein 777 1 S(0.746)PS(0.116)S(0.116)GS(0.022)GGGGPKPYK;S(0.997)PS(0.003)SGSGGGGPKPYK 96.414 0.0010676 1690020000.0 2042650.0 1958860.0 2057290.0 1781540.0 2330830.0 2265890.0 1490920.0 1616510.0 2325580.0 1883310.0 True False 1929340.1325781776 1864753.4252911976 2189906.205180383 1950857.0259604657 2514253.0603914154 2251747.740020781 1641636.7435769902 1610902.7041062694 1903313.295101034 1866625.338593007 1.0335979549235321 0.9989971670998421 1.1731900129626724 1.045125117304445 1.3469511039031357 1.2063201401294943 0.8794677269378519 0.8630026983992986 1.0196546975707943 1.0 20.83200095409453 -6.765052073502778 24.999998016738715 0.9291148155943699 1.1353094551367489 0.4518052318943405 0.10410907921312473 89.83809289422912 621673.0162571988 0.04544256502561297 0.03200817420729097 1.7177024159837166e-07 6.765052073502778 0.20619463954237893 S(ph)PSSKPSLAVAVDSAPEVAVK ddPTM_KYSE-520_SHP099_60min_R1 7 SPSSKPSLAVAVDSAPEVAVK 21 1 Q5SRN1;O60508 Q5SRN1 CDC40 Pre-mRNA-processing factor 17 1 S(0.836)PS(0.08)S(0.08)KPS(0.003)LAVAVDSAPEVAVK;S(0.846)PS(0.132)S(0.021)KPSLAVAVDSAPEVAVK;S(0.581)PS(0.398)S(0.021)KPSLAVAVDSAPEVAVK;S(0.767)PS(0.115)S(0.115)KPS(0.004)LAVAVDSAPEVAVK;S(0.675)PS(0.162)S(0.162)KPS(0.001)LAVAVDSAPEVAVK;S(0.637)PS(0.097)S(0.097)KPS(0.168)LAVAVDSAPEVAVK;S(0.888)PS(0.091)S(0.02)KPS(0.002)LAVAVDSAPEVAVK 226.07 1.3326e-19 7849640000.0 8393680.0 7458470.0 6133680.0 5778390.0 6065630.0 7787150.0 6868360.0 7810020.0 8014250.0 7822890.0 True False 7928065.838013746 7100153.90580829 6529066.827034999 6327566.4482637 6542960.572286268 7738547.508353377 7562680.857533909 7782928.863492377 6559064.222801816 7753585.28071633 1.022503209931973 0.9157252611210498 0.8420706796471578 0.8160826532727729 0.8438625920010238 0.9980605395028861 0.9753785614950012 1.0037845179634546 0.8459395215674785 1.0 22.886432140439222 -6.264248614554469 24.98017917704335 0.9655407816892841 0.8830339877697297 0.2388030410563392 0.06806177920452001 377.06171825052076 3352879.471574141 0.0246347336892167 0.02268574361639052 5.441910381422303e-07 6.264248614554469 -0.0825067939195544 S(ph)PSSKPSLAVAVDSAPEVAVKEDLETGVHLDPAVK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSSKPSLAVAVDSAPEVAVKEDLETGVHLDPAVK 35 2 Q5SRN1;O60508 Q5SRN1 CDC40 Pre-mRNA-processing factor 17 1 S(0.539)PS(0.083)S(0.083)KPS(0.295)LAVAVDSAPEVAVKEDLETGVHLDPAVK;S(0.661)PS(0.101)S(0.101)KPS(0.137)LAVAVDSAPEVAVKEDLETGVHLDPAVK;S(0.78)PS(0.146)S(0.032)KPS(0.042)LAVAVDSAPEVAVKEDLETGVHLDPAVK;S(0.544)PS(0.15)S(0.15)KPS(0.15)LAVAVDS(0.006)APEVAVKEDLETGVHLDPAVK 209.43 1.7324000000000001e-22 730360000.0 521450.0 531400.0 505500.0 396866.0 427490.0 356023.0 337926.0 360740.0 554810.0 375494.0 True False 492524.1290151967 505870.7463523379 538085.3388285964 434584.02531788574 461131.03091462137 353800.9283969737 372086.8579199413 359488.6771373489 454070.48962194624 372167.4152899113 1.323394012427256 1.3592558767088039 1.4458152882874988 1.1677111092043162 1.2390419256758658 0.9506499329646297 0.9997835453436802 0.9659327022418502 1.2200705138794432 1.0 18.505592221780304 -5.775619533555061 1.5347351614601759 1.027237913111745 1.3687682785935402 0.7048296772373426 0.09256011027444273 0.20482940908405253 1.0030233154570756 0.033878626354713816 0.04564452080178911 1.6764108633190732e-06 5.775619533555061 0.34153036548179516 S(ph)PSSQTPNSR ddPTM_KYSE-520_SHP099_60min_R1 5 SPSSQTPNSR 10 0 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 S(0.992)PS(0.004)S(0.004)QTPNSR;S(0.985)PS(0.015)S(0.001)QTPNSR;S(0.964)PS(0.026)S(0.007)QT(0.002)PNSR;S(0.973)PS(0.026)S(0.001)QTPNSR;S(0.997)PS(0.003)SQTPNSR 117.95 0.0013789000000000002 2255390000.0 794618.0 722019.0 760828.0 676649.0 701210.0 738371.0 651985.0 624676.0 803144.0 696758.0 True False 750538.9555082892 687332.1234673853 809872.1902478413 740957.5175180597 756391.2376608612 733762.5527041849 717894.0065604097 622509.1447564749 657313.2952126451 690585.2661895219 1.086815766646133 0.9952892960776782 1.1727330858309721 1.072941393039674 1.09529014691327 1.0625227450230796 1.039544342614737 0.9014225689918435 0.9518206185306222 1.0 19.397460028694628 -7.065001686382945 3.7021502565343485 0.9455779190174547 1.080408399836698 0.6067641121910967 0.046502087667067205 0.15364410832217876 4.110621156899432 0.022877883121751267 0.012940230687718105 8.609904089177144e-08 7.065001686382945 0.13483048081924331 S(ph)PSSVTGNALWK ddPTM_KYSE-520_SHP099_60min_R1 7 SPSSVTGNALWK 12 0 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 S(1)PSSVTGNALWK;S(0.978)PS(0.022)SVTGNALWK;S(0.991)PS(0.009)SVTGNALWK;S(0.998)PS(0.002)SVTGNALWK;S(1)PSSVTGNALWK;S(0.999)PS(0.001)SVTGNALWK;S(0.791)PS(0.209)SVTGNALWK 298.91 5.2808e-30 7230000000.0 4604050.0 4147850.0 3821130.0 3579460.0 4073680.0 3981610.0 3832080.0 3980430.0 4697620.0 3977340.0 True False 4348654.168553865 3948581.0599502195 4067446.153824171 3919650.802196109 4394255.439931397 3956759.2950867624 4219464.0438967375 3966622.817369348 3844650.6253633564 3942103.861923693 1.1031302880061056 1.0016430815253472 1.0317957862833458 0.994304295240809 1.1146980378611995 1.0037176679449327 1.0703584156297943 1.0062197639393726 0.9752788764645128 1.0 21.910534356641218 -7.4720632894936285 6.072589118428915 0.9883514938667924 1.0424061712693549 0.2708469406998336 0.0394857266101218 0.2689467703777587 23.568037879036904 0.0216577347544536 0.009877131167209483 3.372381595480401e-08 7.4720632894936285 0.05405467740256242 S(ph)PSTLLPK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSTLLPK 8 0 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-4;B5MEG9;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.979)PS(0.019)T(0.002)LLPK;S(0.666)PS(0.328)T(0.006)LLPK;S(0.699)PS(0.295)T(0.007)LLPK;S(0.977)PS(0.023)TLLPK 111.31 0.0011119 8410440000.0 3473120.0 3524790.0 3207460.0 2981880.0 3153310.0 3045100.0 2858640.0 3178250.0 3828250.0 2970770.0 True False 3280459.110106925 3355453.797582344 3414218.0037174537 3265276.978665091 3401457.557120363 3026094.4013775047 3147619.228837852 3167225.3925591237 3133136.302329107 2944451.2890240895 1.1141155984938036 1.139585433146859 1.1595430416677275 1.108959414895716 1.1552093151616525 1.0277277850232243 1.0690002719933263 1.0756589536276113 1.0640815536695651 1.0 21.48956737609286 -6.258891946775108 24.999252084268228 1.0533790564299084 1.1355736848468843 0.7474414006258402 0.02550926142546337 119.49833175476223 1172701.917297096 0.008355400178535598 0.007996417243848487 5.509447553709133e-07 6.258891946775108 0.08219462841697589 S(ph)PSTTYLHTPTPSEDAAIPSK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSTTYLHTPTPSEDAAIPSK 21 0 Q13111 Q13111 CHAF1A Chromatin assembly factor 1 subunit A 1 S(0.209)PS(0.209)T(0.209)T(0.209)Y(0.163)LHT(0.001)PTPSEDAAIPSK;S(0.211)PS(0.211)T(0.211)T(0.211)Y(0.154)LHTPTPSEDAAIPSK;S(0.949)PS(0.019)T(0.012)T(0.019)YLHTPTPSEDAAIPSK;S(0.79)PS(0.069)T(0.069)T(0.069)Y(0.003)LHTPTPSEDAAIPSK 173.89 1.5475e-09 11897530000.0 2985640.0 3267220.0 2880220.0 3128280.0 2750650.0 2760940.0 2794910.0 3395270.0 3790570.0 3178900.0 True False 2820020.5974742146 3110257.8470028 3065883.5897149355 3425590.790648318 2967110.5059423656 2743707.9493413093 3077446.7784929876 3383492.600831979 3102298.0404936057 3150737.4191467785 0.8950351052224078 0.9871523498283331 0.9730685810514729 1.0872346168332776 0.9417193854084676 0.8708145377866198 0.9767385754812795 1.0738732400455735 0.9846260185444808 1.0 21.58725809521887 -7.0211323300820005 24.149725072493762 1.0226109770397844 0.9625750803022347 0.17342105003763797 0.05852580127912277 942.2678373841602 1076805.4145426531 0.028678835254907463 0.016804450834625007 9.52505890044122e-08 7.0211323300820005 -0.06003589673754972 S(ph)PSVAAMASPQLCR ddPTM_KYSE-520_SHP099_60min_R1 3 SPSVAAMASPQLCR 14 0 P25325-2 P25325-2 1 S(0.617)PS(0.383)VAAMASPQLCR;S(0.592)PS(0.408)VAAMASPQLCR;S(0.976)PS(0.024)VAAMASPQLCR 131.36 2.6639e-05 3551860000.0 322621.0 281785.0 191837.0 205575.0 199802.0 271085.0 239246.0 254352.0 287787.0 288627.0 True False 304724.5700009809 268247.6256320917 204203.1199700528 225112.78619162276 215525.2806821286 269393.0579611247 263431.3204959494 253469.71227820282 235532.135319895 286069.9893284078 1.0652098485282135 0.9376992891209709 0.7138222378707051 0.7869150717980197 0.7534005268714363 0.941703317406923 0.9208631814696604 0.8860409051409446 0.8233374492474447 1.0 18.126008631594466 -6.316121355522296 24.999857216490398 0.9076711592011637 0.8449759316243283 0.0839396352433317 0.10173294080288534 934.1798232348897 427091.7642321461 0.03863510117974931 0.034072926119781466 4.82923839091744e-07 6.316121355522296 -0.06269522757683543 S(ph)PSVPKS(ph)PTPK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSVPKSPTPK 11 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 2 S(0.999)PS(0.001)VPKS(0.827)PT(0.173)PK;S(0.998)PS(0.002)VPKS(0.808)PT(0.192)PK 159.12 7.3755e-05 2301000000.0 1538300.0 1366790.0 1237800.0 1754560.0 1790300.0 2129460.0 2289060.0 2544640.0 2498730.0 2472550.0 True False 1452967.4324749748 1301127.3568063837 1317590.568550023 1921312.8548723012 1931186.4245864141 2116169.2502569202 2520460.523872741 2535813.2377634407 2045023.6198573261 2450645.130614794 0.5928918121696667 0.5309325860982449 0.537650495410357 0.7840028859626449 0.7880318535152158 0.8635151715034467 1.0284885773079813 1.0347533415118657 0.8344837831923427 1.0 21.224730157009716 -5.7232968140806975 1.0153056980267379 0.9732900464168539 0.5328752375943974 0.8582590156911175 0.06911902294423909 0.1887437359007112 0.4145170034952575 0.03180698123921938 0.05149095195096911 1.8910507577788616e-06 5.7232968140806975 -0.44041480882245654 S(ph)PSVPKSPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSVPKSPTPK 11 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 2 S(0.871)PS(0.129)VPKS(0.078)PT(0.922)PK;S(0.977)PS(0.023)VPKS(0.146)PT(0.854)PK 185.66 1.7271000000000002e-06 1805980000.0 2786600.0 2367100.0 2229900.0 3247500.0 3464200.0 3857800.0 4299500.0 4715700.0 4352300.0 4428900.0 True False 2632021.7430506167 2253380.962910464 2373642.921966151 3556141.4236035235 3736812.8313982375 3833722.0392217506 4734135.419076326 4699342.337352658 3562032.0325545575 4389663.391632058 0.5995953466655316 0.5133379855972662 0.5407346099682693 0.8101171106610445 0.8512754847038299 0.8733521678518474 1.0784734492628592 1.0705473103725758 0.8114590379173037 1.0 22.06567888451944 -5.574654780291147 1.2284301381248304 0.9809706748483649 0.5277410309180278 0.8188320358414766 0.08365990614017238 0.18800167611957475 0.5844179162997156 0.03285887673332383 0.05837323544885354 2.6628409050055063e-06 5.574654780291147 -0.45322964393033704 S(ph)PSVS(ph)PSKQPVSTSSK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSVSPSKQPVSTSSK 16 1 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 2 S(0.765)PS(0.248)VS(0.967)PS(0.019)KQPVSTSSK;S(0.959)PS(0.273)VS(0.742)PS(0.026)KQPVSTSSK;S(0.809)PS(0.408)VS(0.76)PS(0.024)KQPVSTSSK;S(0.988)PS(0.012)VS(0.998)PS(0.002)KQPVSTSSK 220.64 2.7516000000000003e-14 7015220000.0 5503100.0 4521400.0 3819090.0 4385870.0 4139210.0 4279890.0 4382580.0 4294640.0 4701470.0 3993640.0 True False 5197832.072842119 4304185.157240235 4065274.652160055 4802701.766140104 4464942.278116703 4253177.618965417 4825613.956258983 4279742.896216511 3847801.5624139607 3958259.4566049073 1.3131610319704567 1.0873933870247194 1.0270359224119525 1.213336775618922 1.1280064702848938 1.0745070315864207 1.2191252264190955 1.081218384781514 0.9720943269631727 1.0 21.916434750807394 -6.254165379519414 0.021210591803853908 3.485451900328065e-07 2.233914424336502 0.32064182423637966 0.08436222897261572 749.8858369313261 6.268991189713359 310.63777713517186 348.32024892295993 5.569736127602327e-07 6.254165379519414 2.233914075791312 S(ph)PSVSPSK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSVSPSK 8 0 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 1 S(1)PSVSPSK;S(0.997)PS(0.003)VSPSK 118.04 0.00097934 1441900000.0 2660600.0 2136540.0 1976560.0 2318400.0 2334300.0 2372000.0 2207000.0 2315900.0 2353600.0 2422900.0 True False 2513011.2142253895 2033897.411388077 2103972.2202078165 2538740.038947622 2517996.1296498184 2357195.468151278 2430105.0982443187 2307866.6834351225 1926245.5694277545 2401434.9909876776 1.0464623125991106 0.8469508518952507 0.8761312415717243 1.0571762502317301 1.0485381195408503 0.981577880308055 1.0119387396969883 0.961036501964989 0.8021227210633405 1.0 21.195465323371437 -3.843846215034614 19.080425737920557 0.958418448775054 85.0292958714881 0.10145301082541258 0.08163080481826822 1339.8235381211898 163709.61414474735 0.02075740694787332 121.75986405233769 0.0001432695131061431 3.843846215034614 84.07087742271305 S(ph)PSWQRPNQGVPSTGR ddPTM_KYSE-520_SHP099_60min_R1 6 SPSWQRPNQGVPSTGR 16 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6;A0A0A0MSP3 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 S(0.559)PS(0.441)WQRPNQGVPSTGR;S(0.803)PS(0.065)WQRPNQGVPS(0.092)T(0.039)GR;S(0.671)PS(0.322)WQRPNQGVPS(0.006)TGR;S(0.951)PS(0.049)WQRPNQGVPSTGR;S(0.991)PS(0.009)WQRPNQGVPSTGR;S(0.997)PS(0.003)WQRPNQGVPSTGR 150.65 4.7804e-06 38587320000.0 1593158.0 1446283.0 1309883.0 1418861.0 1334486.0 1499929.0 1618883.0 1881890.0 1912710.0 1603545.0 True False 1504782.349858266 1376801.3937649592 1394320.154066901 1553709.1228438849 1439502.4560133093 1490567.3867405884 1782535.4924155239 1875362.1628264287 1565410.0794953064 1589338.8388391333 0.9467976954224386 0.8662730439347891 0.8772957156733956 0.977582051652829 0.9057240789916984 0.9378537479328899 1.1215578760520966 1.1799637163565506 0.9849442052512196 1.0 20.599995301940105 -6.696623056396019 5.875290288848707 1.0863661062629089 0.9148545302972767 0.6011832918193594 0.06068227845289652 0.1253599826963737 8.124079238829475 0.023385836674650558 0.017804983927007932 2.01083735108627e-07 6.696623056396019 -0.17151157596563216 S(ph)PSWTAPPVIALQNGLSEDEALQR ddPTM_KYSE-520_SHP099_60min_R1 3 SPSWTAPPVIALQNGLSEDEALQR 24 0 A0A087X0D9;E9PFU9;Q8WV99 A0A087X0D9 ZFAND2B AN1-type zinc finger protein 2B 1 S(0.333)PS(0.333)WT(0.333)APPVIALQNGLSEDEALQR;S(0.333)PS(0.333)WT(0.333)APPVIALQNGLSEDEALQR;S(0.333)PS(0.333)WT(0.333)APPVIALQNGLSEDEALQR 107.74 0.00020199 107284000.0 40211.1 39817.5 43116.5 32114.0 35286.1 42439.2 41655.4 41340.2 59588.0 42161.7 True False 37980.51012415948 37904.60753271402 45895.85857883918 35166.10490457383 38062.91531955468 42174.3212107781 45866.33434952712 41196.80049507523 48768.32129123934 41788.180139306234 0.9088816502069869 0.9070652851201984 1.0982976149198045 0.8415323373102904 0.9108536239833153 1.009240437611416 1.0975910938601738 0.9858481598801487 1.1670362559140866 1.0 15.350807310711158 -6.477387353026285 4.2952331299110496 1.06119755014414 0.9367094545361553 0.38486244031830397 0.07717725733594628 0.24058593325255043 9.577980341433168 0.02847641540091347 0.02393257049208431 3.331291578922627e-07 6.477387353026285 -0.12448809560798468 S(ph)PSY(ph)GRS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 SPSYGRSR 8 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 3 S(0.943)PS(0.089)Y(0.968)GRS(1)R;S(0.974)PS(0.044)Y(0.982)GRS(1)R;S(0.809)PS(0.313)Y(0.881)GRS(0.997)R;S(0.994)PS(0.031)Y(0.976)GRS(0.999)R 107.97 0.00059234 3044830000.0 1900450.0 2024200.0 2008680.0 1449900.0 1570080.0 1629250.0 1242837.0 1345314.0 2589950.0 1430116.0 True False 1795028.25004685 1926954.3936138565 2138162.7268016366 1587698.0600716698 1693636.3634668144 1619081.2464103969 1368475.0928802332 1340647.4197326477 2119680.3673263993 1417446.2848534132 1.266381851099553 1.3594549678566017 1.5084612021278514 1.1201116240082871 1.1948504726879041 1.142252277008039 0.9654511126830853 0.9458188532846535 1.4954220064470438 1.0 20.43486263356121 -5.282908400627589 23.29375387044725 1.118337099422928 1.376234874717219 0.35643763473501366 0.15671496937182908 350.25310648970714 380021.63143602974 0.04397988792729423 0.06532518462833654 5.213046506632629e-06 5.282908400627589 0.25789777529429103 S(ph)PT(ph)PDGSER ddPTM_KYSE-520_SHP099_60min_R1 2 SPTPDGSER 9 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 2 S(1)PT(1)PDGSER;S(1)PT(1)PDGSER 116.55 0.0019219999999999999 520355000.0 696070.0 550070.0 539000.0 579790.0 582970.0 613090.0 685210.0 568440.0 687810.0 623080.0 True False 657457.6095188567 523643.81152809743 573744.8024304922 634893.0672797804 628846.4223544342 609263.477895812 754477.7138051616 566468.2143148932 562921.0422791057 617559.9959489047 1.064605242942668 0.847923788721934 0.9290511143762014 1.0280670241670087 1.0182758379421701 0.9865656485078106 1.2217075567627687 0.9172683108213527 0.9115244607354399 1.0 19.23621977575497 -5.259881782724627 24.17995295086476 1.0164184956757758 0.9372664179909513 0.08626577448446915 0.09409664616035544 193.5536580064698 3004656.54026842 0.02639133781970946 0.04275975728024865 5.496904821770104e-06 5.259881782724627 -0.07915207768482446 S(ph)PT(ph)SSPTPQR ddPTM_KYSE-520_SHP099_60min_R1 2 SPTSSPTPQR 10 0 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 2 S(0.978)PT(0.493)S(0.162)S(0.366)PTPQR;S(0.999)PT(0.444)S(0.153)S(0.405)PTPQR 154.15 0.00020772 1694770000.0 3228500.0 2826200.0 2683900.0 2767800.0 2665500.0 2837500.0 2500300.0 2757300.0 3413400.0 2645900.0 True False 3049408.6691448074 2690425.1097873114 2856908.4883918343 3030850.879830589 2875259.6853795988 2819790.109982817 2753054.724576472 2747735.5698586605 2793612.604811646 2622459.3844790477 1.1628049178540751 1.0259167885346545 1.0894004709092415 1.155728434830524 1.0963981758484964 1.0752464372457646 1.0497988036994392 1.0477704959402065 1.0652643931667976 1.0 21.322488998460592 -6.568265774320111 2.1148660908600903 1.0431863300941693 1.1033743302060883 0.3890590839125878 0.03858103337628324 0.39276638464638347 3.554099015454437 0.01750500197856455 0.013043255284919543 2.702304134369684e-07 6.568265774320111 0.06018800011191905 S(ph)PTAALNESLVECPK ddPTM_KYSE-520_SHP099_60min_R1 10 SPTAALNESLVECPK 15 0 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 S(0.896)PT(0.104)AALNESLVECPK;S(0.709)PT(0.291)AALNESLVECPK;S(0.999)PT(0.001)AALNESLVECPK;S(0.5)PT(0.5)AALNESLVECPK;S(1)PTAALNESLVECPK;S(0.89)PT(0.11)AALNESLVECPK;S(0.996)PT(0.004)AALNESLVECPK;S(0.999)PT(0.001)AALNESLVECPK;S(0.999)PT(0.001)AALNESLVECPK;S(0.921)PT(0.079)AALNESLVECPK 355.43 2.3223e-67 11035830000.0 3467908.0 3371808.0 2876185.0 2567480.0 2703760.0 3922383.0 3328948.0 4006299.0 4634620.0 4101936.0 True False 3275536.2301367903 3209821.282493011 3061588.4871587073 2811492.527258988 2916530.529709976 3897901.952762902 3665470.5512416055 3992402.0838462184 3793089.8372625965 4065596.0382979224 0.8056718373594506 0.7895081686071338 0.7530478823568643 0.6915326807618669 0.7173684995351858 0.9587528903621162 0.9015825765060931 0.9819967469069193 0.9329726321876751 1.0 21.955035444000963 -6.265761538929733 24.987381991187423 0.9505933754178408 0.7503042160029153 0.8708747997617348 0.03918574115659012 135.8466463863237 785357.2806876941 0.014544515361839523 0.013270690133107924 5.422985722910347e-07 6.265761538929733 -0.20028915941492553 S(ph)PTADAKPAPK ddPTM_KYSE-520_SHP099_60min_R1 6 SPTADAKPAPK 11 1 E9PDI4;O00515 E9PDI4 LAD1 Ladinin-1 1 S(0.542)PT(0.458)ADAKPAPK;S(0.99)PT(0.01)ADAKPAPK;S(0.99)PT(0.01)ADAKPAPK;S(0.984)PT(0.016)ADAKPAPK;S(0.95)PT(0.05)ADAKPAPK;S(0.983)PT(0.017)ADAKPAPK 132.86 9.1454e-05 3982740000.0 8226430.0 6972870.0 6314570.0 7568590.0 7615410.0 7186440.0 7592850.0 8203430.0 8102880.0 7642880.0 True False 7770093.528918362 6637882.858708745 6721617.285869233 8287906.518020445 8214699.441244278 7141586.762285428 8360409.377074936 8174974.216024963 6631601.248982296 7575170.02927067 1.0257318976200536 0.8762684973485452 0.8873222990238786 1.094088513656557 1.084424430013115 0.9427625696439995 1.103659633350813 1.0791802935692048 0.875439260552252 1.0 22.85284684043552 -5.252868657593146 24.97377857090663 1.0311954601096855 0.9244236558330876 0.23647711775391433 0.0783292938154849 833.1540495711697 2427679.2688874546 0.021138896812547752 0.035890367847778055 5.586391167824588e-06 5.252868657593146 -0.10677180427659794 S(ph)PTATFEK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTATFEK 8 0 Q9HC44 Q9HC44 GPBP1L1 Vasculin-like protein 1 1 S(0.997)PT(0.003)ATFEK 76.22800000000001 0.015642 441860000.0 780270.0 673320.0 672060.0 702390.0 774890.0 851590.0 774390.0 863370.0 1016600.0 890410.0 True False 736986.8676703174 640972.6965260758 715382.0629340195 769144.9344187464 835869.434479008 846274.9109287295 852672.8985180864 860375.1709820722 832011.0664005155 882521.6601284972 0.8350921013802771 0.7262968440148525 0.8106113370972201 0.8715309427156237 0.9471375856738785 0.9589282044426082 0.9661778708002875 0.9749054440848507 0.9427656045058121 1.0 19.751272161972455 -5.5155083121498 1.715196320843041 0.967104639351996 0.7783141166424061 0.8843304145566184 0.02857436285549 0.10548022233227639 0.6245102016268886 0.009078672461554634 0.014991317210958246 3.0513476275210608e-06 5.5155083121498 -0.18879052270958985 S(ph)PTDDKVK ddPTM_KYSE-520_SHP099_60min_R1 3 SPTDDKVK 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.925)PT(0.075)DDKVK;S(1)PTDDKVK;S(0.898)PT(0.102)DDKVK 148.32 0.00029817 3334630000.0 6217630.0 3866210.0 3421740.0 4977660.0 5547430.0 5897370.0 6208230.0 4115860.0 5976240.0 6938790.0 True False 5872725.669361881 3680471.4683004767 3642310.8353775768 5450735.309811945 5983981.180440948 5860562.326311668 6835818.474885968 4101583.042308945 4891105.464750552 6877317.718896928 0.8539267646782245 0.5351608895700106 0.5296121226695015 0.7925670345045805 0.8701039307808416 0.8521581473847714 0.9939657805983091 0.5963928394698056 0.7111937625494855 1.0 22.713414566202488 -5.401855005153423 6.1439945012250705 0.8260906214477064 0.6302317916848861 0.28282657299931846 0.14012789769414025 0.3140977880567876 14.518566991527539 0.040712771425006726 0.06064239584018144 3.964103589057304e-06 5.401855005153423 -0.19585882976282032 S(ph)PTEDFR ddPTM_KYSE-520_SHP099_60min_R1 5 SPTEDFR 7 0 Q8IXT5 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.974)PT(0.026)EDFR;S(0.986)PT(0.014)EDFR;S(0.937)PT(0.063)EDFR;S(0.996)PT(0.004)EDFR;S(0.974)PT(0.026)EDFR 120.15 0.002529 4141500000.0 4611010.0 4014900.0 3907370.0 3726330.0 4268420.0 4183430.0 3807700.0 4096750.0 4572310.0 4138310.0 True False 4355228.083479449 3822018.177512235 4159245.3222130514 4080479.282838036 4604320.370012376 4157319.66160543 4192619.4755708594 4082539.3304386404 3742093.762555322 4101647.7929564593 1.061824004235188 0.9318250543295264 1.0140425341628556 0.9948390229520011 1.1225538131087536 1.0135730495301358 1.0221793013945812 0.995341271732148 0.9123391259925876 1.0 21.967772182748273 -7.546567548574593 7.947987500133049 0.955031137864118 1.0206496756594419 0.2228476026445455 0.04957651971736084 0.30633725225622754 80.18203540594007 0.033344661863353844 0.012765342599973108 2.8407463113337068e-08 7.546567548574593 0.0656185377953239 S(ph)PTFGK ddPTM_KYSE-520_SHP099_60min_R1 3 SPTFGK 6 0 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 S(0.998)PT(0.002)FGK;S(0.998)PT(0.002)FGK;S(0.999)PT(0.001)FGK 75.738 0.0321 1267920000.0 1115750.0 1245530.0 1083620.0 2732350.0 2657410.0 3909110.0 4101930.0 6165600.0 6061300.0 3902630.0 True False 1053857.1233075175 1185692.8692213555 1153471.8790533028 2992031.72248902 2866533.048405401 3884711.7944792686 4516593.1153789405 6144212.972661853 4960720.712938658 3868055.7344001913 0.27245138014303616 0.30653458756462765 0.2982045653569592 0.7735234257044608 0.7410785276210365 1.0043060548303242 1.1676649525008242 1.5884499589855623 1.2824842901876912 1.0 21.883177151926795 -5.906583093362213 0.8350239507882324 1.3293889057216977 0.23767894498855105 0.8570794012471924 0.16173464800276927 0.21359266128711096 0.32812736005437076 0.09177222863335148 0.12856895937538176 1.2399863564056996e-06 5.906583093362213 -1.0917099607331466 down S(ph)PTFSEELPVLGDGQQLR ddPTM_KYSE-520_SHP099_60min_R1 10 SPTFSEELPVLGDGQQLR 18 0 Q8N0Z3 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 S(0.922)PT(0.078)FSEELPVLGDGQQLR;S(0.989)PT(0.011)FSEELPVLGDGQQLR;S(0.841)PT(0.117)FS(0.042)EELPVLGDGQQLR;S(0.953)PT(0.047)FSEELPVLGDGQQLR;S(0.5)PT(0.5)FSEELPVLGDGQQLR;S(0.977)PT(0.023)FSEELPVLGDGQQLR;S(0.98)PT(0.02)FSEELPVLGDGQQLR;S(0.999)PT(0.001)FSEELPVLGDGQQLR;S(0.973)PT(0.027)FSEELPVLGDGQQLR;S(0.981)PT(0.019)FSEELPVLGDGQQLR 354.97 1.8533999999999997e-61 3469846000.0 1249282.0 1188919.0 1130253.0 1130884.0 1079193.0 1240347.0 1282233.0 1361814.0 1429592.0 1259279.0 True False 1179981.837078074 1131801.5466361973 1203110.916848741 1238362.875347328 1164119.349331782 1232605.534289643 1411853.625028143 1357090.1850837772 1170014.12988161 1248122.7677642358 0.9454052658551988 0.9068030612594264 0.9639363594046725 0.9921803426161427 0.9326961893476798 0.9875675423320824 1.1311816926128175 1.0873050473349948 0.9374191065975489 1.0 20.251328416772413 -6.531374509714757 24.834719955107253 1.0481265772439101 0.950312351259053 0.39786825663349734 0.05212621745719737 174.46050275261635 509974.9388002353 0.020139898190382508 0.015626011838524554 2.941883634282107e-07 6.531374509714757 -0.09781422598485712 S(ph)PTGNTPPVIDSVSEK ddPTM_KYSE-520_SHP099_60min_R1 4 SPTGNTPPVIDSVSEK 16 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.93)PT(0.07)GNTPPVIDSVSEK;S(0.5)PT(0.5)GNTPPVIDSVSEK;S(0.973)PT(0.027)GNTPPVIDSVSEK;S(0.995)PT(0.005)GNTPPVIDSVSEK 227.0 2.2289e-18 1880300000.0 2496950.0 2176290.0 1915340.0 1858860.0 1896470.0 2523630.0 2342750.0 2326030.0 2449990.0 2558690.0 True False 2358439.2059535803 2071737.7617221097 2038805.8810523562 2035525.4955133614 2045711.3995617484 2507879.089076983 2579578.033036649 2317961.5448294855 2005133.5752219146 2536021.9972306946 0.9299758474212635 0.8169242080646076 0.8039385633400292 0.8026450471392325 0.8066615359786471 0.9889027349981808 1.0171749440081819 0.9140147630267684 0.7906609553905669 1.0 21.27413582866506 -6.253274633537018 24.91617370590173 0.9414656191440247 0.8279968535023695 0.3909323722893582 0.06863168800160725 649.7129965747332 1982715.9211625173 0.023937337308499698 0.02352753206571353 5.581171482051104e-07 6.253274633537018 -0.1134687656416552 S(ph)PTGPSNSFLANMGGTVAHK ddPTM_KYSE-520_SHP099_60min_R1 18 SPTGPSNSFLANMGGTVAHK 20 0 Q5W012;Q96I25;H0Y6J6 Q5W012 RBM17 Splicing factor 45 1 S(0.5)PT(0.5)GPSNSFLANMGGTVAHK;S(0.498)PT(0.498)GPS(0.003)NSFLANMGGTVAHK;S(0.5)PT(0.5)GPS(0.001)NSFLANMGGTVAHK;S(0.44)PT(0.44)GPS(0.06)NS(0.06)FLANMGGTVAHK;S(0.96)PT(0.039)GPS(0.001)NS(0.001)FLANMGGTVAHK;S(0.975)PT(0.025)GPSNSFLANMGGTVAHK;S(0.969)PT(0.031)GPSNSFLANMGGTVAHK;S(0.974)PT(0.026)GPSNSFLANMGGTVAHK;S(0.578)PT(0.421)GPSNSFLANMGGTVAHK;S(0.857)PT(0.14)GPS(0.001)NS(0.002)FLANMGGTVAHK;S(0.499)PT(0.499)GPS(0.001)NS(0.001)FLANMGGTVAHK;S(0.841)PT(0.159)GPSNSFLANMGGTVAHK;S(0.994)PT(0.006)GPSNSFLANMGGTVAHK;S(0.662)PT(0.338)GPSNSFLANMGGTVAHK;S(0.967)PT(0.033)GPSNSFLANMGGTVAHK;S(0.71)PT(0.29)GPSNSFLANMGGTVAHK;S(0.963)PT(0.037)GPSNSFLANMGGTVAHK;S(0.836)PT(0.164)GPSNSFLANMGGTVAHK 301.0 1.4991999999999999e-44 70463630000.0 18041503.0 18972167.0 18907591.0 25466917.0 18814663.0 18505102.0 18064944.0 18078231.0 21997037.0 18460382.0 True False 17040704.86374543 18060715.619516768 20126404.569075245 27887285.13477221 20295269.937311266 18389604.794298954 19891124.83638339 18015521.836151842 18002929.580977365 18296837.37743986 0.9313470143619873 0.9870949414342922 1.0999936302593614 1.5241587690535767 1.1092228410105174 1.005070133977005 1.0871345919546347 0.9846249089126801 0.9839366885981681 1.0 24.12509096331134 -6.185159195165078 5.512023537319409 1.0160476897028952 1.1441966992474626 0.1332443420988756 0.14979671011353543 0.5130098987661388 27.65193517614959 0.055057374282093306 0.05489378201500207 6.528911847157911e-07 6.185159195165078 0.12814900954456743 S(ph)PTIPR ddPTM_KYSE-520_SHP099_60min_R1 3 SPTIPR 6 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 S(0.944)PT(0.056)IPR;S(0.985)PT(0.015)IPR;S(0.993)PT(0.007)IPR 100.39 0.012061 1322900000.0 976060.0 825150.0 702940.0 679840.0 831580.0 782980.0 676370.0 734720.0 717000.0 766450.0 True False 921916.00607263 785508.5554245998 748252.6371437662 744451.78919865 897020.6149570297 778093.131388316 744744.080335075 732171.4278049367 586810.8740991238 759659.8492890775 1.213590539154332 1.0340266846532862 0.9849837895789982 0.9799804345265059 1.1808187780313786 1.0242651788382515 0.980365200335438 0.9638148290845361 0.7724653009479002 1.0 19.534994046157998 -7.06539982965443 1.7681380383788794 0.8934066564479735 1.0660851925088268 0.3935597822180781 0.08959001787947825 0.39630970257673026 2.3866404441748332 0.059234188514760755 0.0279591415218904 8.6020145011422e-08 7.06539982965443 0.17267853606085337 S(ph)PTKAPHLQLIEGK ddPTM_KYSE-520_SHP099_60min_R1 8 SPTKAPHLQLIEGK 14 1 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3;H0Y5B0 O43491 EPB41L2 Band 4.1-like protein 2 1 S(0.906)PT(0.094)KAPHLQLIEGK;S(0.5)PT(0.5)KAPHLQLIEGK;S(0.989)PT(0.011)KAPHLQLIEGK;S(0.991)PT(0.009)KAPHLQLIEGK;S(0.978)PT(0.022)KAPHLQLIEGK;S(0.968)PT(0.032)KAPHLQLIEGK;S(0.987)PT(0.013)KAPHLQLIEGK;S(0.984)PT(0.016)KAPHLQLIEGK 215.75 5.1055e-14 27241560000.0 16418280.0 14392770.0 14681190.0 15195350.0 15902030.0 15866020.0 15880210.0 18532550.0 23563100.0 17620550.0 True False 15507525.27937026 13701319.7252118 15627562.998134548 16639511.495351445 17153429.290826082 15766994.283978714 17485536.602714278 18468264.90957968 19284635.017412927 17464445.63558044 0.887948326729402 0.7845264608512968 0.8948215892004269 0.9527649398416432 0.982191456216582 0.9028053116015606 1.001207651681246 1.0574778779095142 1.1042225685150981 1.0 24.05791751298541 -5.830783902849893 0.5330573802978736 1.0578698379308422 0.8165051597260019 0.676296143303274 0.05010125755505511 0.6785025074530966 0.39283541292124186 0.04221164603114483 0.08248273636017112 1.4764410011108513e-06 5.830783902849893 -0.2413646782048403 S(ph)PTKTDPKNEEEEK ddPTM_KYSE-520_SHP099_60min_R1 6 SPTKTDPKNEEEEK 14 2 A0A0A0MRN4;Q5BKZ1-3;Q5BKZ1 A0A0A0MRN4 ZNF326 DBIRD complex subunit ZNF326 1 S(0.987)PT(0.01)KT(0.003)DPKNEEEEK;S(0.844)PT(0.154)KT(0.002)DPKNEEEEK;S(0.988)PT(0.012)KTDPKNEEEEK;S(0.971)PT(0.029)KTDPKNEEEEK;S(0.986)PT(0.013)KTDPKNEEEEK;S(0.991)PT(0.009)KTDPKNEEEEK 145.88 2.5716e-06 12972700000.0 16822680.0 18044210.0 20152630.0 12984900.0 15309890.0 14206630.0 11434800.0 12442070.0 23799440.0 14078300.0 True False 15889492.405218828 17177339.06668859 21451700.775148075 14218980.991947446 16514691.24164178 14117961.152488178 12590741.1768936 12398911.363170968 19478061.631059516 13953577.21475165 1.138739705286508 1.231034795043725 1.5373621004131792 1.0190204829278626 1.183545336616802 1.0117807738622568 0.9023307058194893 0.8885829900351935 1.3959188623306868 1.0 23.734131690810564 -5.306541347814936 24.99319813651702 1.049573993415697 1.2952447738157646 0.31145473318354366 0.16660096707450717 509.65858365207384 282425.5879425895 0.047230904634679736 0.07005503899996021 4.9369491286851205e-06 5.306541347814936 0.24567078040006773 S(ph)PTKTDPKNEEEEKR ddPTM_KYSE-520_SHP099_60min_R1 1 SPTKTDPKNEEEEKR 15 3 A0A0A0MRN4;Q5BKZ1-3;Q5BKZ1 A0A0A0MRN4 ZNF326 DBIRD complex subunit ZNF326 1 S(0.987)PT(0.012)KTDPKNEEEEKR 110.77 0.00025897 1011400000.0 864590.0 972400.0 971680.0 570020.0 707800.0 675800.0 456370.0 480970.0 1174800.0 557100.0 True False 816629.4691825653 925684.444397843 1034316.0475429696 624194.5294172377 763499.8331688903 671582.0815247179 502504.33334198414 479301.62732924137 961485.9342979783 552164.527417242 1.4789603979132129 1.6764648912304203 1.873202634694769 1.1304502524581164 1.382739736542245 1.2162716874733936 0.9100626867366071 0.8680413237901792 1.7413033372414262 1.0 19.074738682603567 -5.272566606540731 24.889628969074447 1.1718217501326025 1.676234866985862 0.44811557202030206 0.2530849203576081 603.1182864143768 1349067.333442011 0.07156015064537466 0.10727613654876285 5.338673895336366e-06 5.272566606540731 0.5044131168532595 S(ph)PTLGIAR ddPTM_KYSE-520_SHP099_60min_R1 7 SPTLGIAR 8 0 Q99618;F5GX58;F8WDL1;J3KMY0 Q99618 CDCA3 Cell division cycle-associated protein 3 1 S(0.997)PT(0.003)LGIAR;S(0.946)PT(0.054)LGIAR;S(0.988)PT(0.012)LGIAR;S(1)PTLGIAR;S(0.999)PT(0.001)LGIAR;S(0.993)PT(0.007)LGIAR;S(0.876)PT(0.124)LGIAR 159.1 0.00023605 6339670000.0 3933290.0 4352620.0 3749520.0 5587550.0 6467580.0 3911580.0 3776080.0 4665140.0 4832650.0 3715480.0 True False 3715102.562880781 4143513.6017841827 3991220.058644116 6118589.072041838 6976541.75050361 3887166.378293069 4157803.017389406 4648957.7181918565 3955162.5811926494 3682563.7377996985 1.0088359163337997 1.1251709126587712 1.0838156085870865 1.6615025584588103 1.8944795656604265 1.055559836858552 1.1290512027562785 1.262424237351984 1.0740242023769633 1.0 21.81227906496188 -7.407728564286321 1.0799116013896368 1.0351352282619568 1.317944827090105 0.11907706283462693 0.27005808861315095 1.2869894203209207 2.6733245593420785 0.27320284431228764 0.1011843920279805 3.910852492013738e-08 7.407728564286321 0.28280959882814827 S(ph)PTLLR ddPTM_KYSE-520_SHP099_60min_R1 1 SPTLLR 6 0 Q5JT35;P55197-1;P55197;H0Y5P4 Q5JT35 MLLT10 Protein AF-10 1 S(0.992)PT(0.008)LLR 111.65 0.0088917 518590000.0 116170.0 110260.0 95594.0 85198.0 85992.0 95275.0 86358.0 100690.0 111040.0 92983.0 True False 109725.81852084635 104962.94409636583 101756.14219580786 93295.19230428715 92759.08117244874 94680.35338453321 95087.90941286029 100340.72989122274 90877.93509060919 92159.24295967934 1.1906111096078837 1.1389301900221582 1.1041338766240438 1.0123259404930747 1.0065087146281337 1.0273560235944743 1.0317783258534607 1.0887755440343938 0.9860968056168741 1.0 16.49184124538781 -4.9032295843412355 1.8552528980879528 1.0253220298195216 1.1793822890404633 0.8114466496615298 0.028176231343546878 0.15528799266648444 1.0256479420956703 0.008295819967810413 0.026835417952240287 1.2495982710989023e-05 4.9032295843412355 0.1540602592209417 S(ph)PTLSQVHSPLVT(ph)SPSANLK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTLSQVHSPLVTSPSANLK 20 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 2 S(0.995)PT(0.005)LSQVHSPLVT(0.505)S(0.291)PS(0.204)ANLK 100.23 0.0010709 481210000.0 86840.0 110080.0 91537.0 155730.0 86756.0 112550.0 127640.0 120380.0 173850.0 168180.0 True False 82022.8120887518 104791.59156655146 97437.62148437835 170530.5323780682 93583.20362588344 111847.53370169736 140543.09684635483 119962.4298769033 142283.22240185866 166690.05604206008 0.4920678175790846 0.6286613254248946 0.5845436962345996 1.0230396247214595 0.5614204341155783 0.6709910378425659 0.8431402579341163 0.7196735829678633 0.8535795462565388 1.0 17.346808516813276 -4.320655989299092 0.09214122663746853 1.2126674846031353 7.574346657601318e-12 0.44423301403131965 0.1304720603689442 69.24490277576133 1.0476867510480692 3.4309611232915027 12.251258870333483 4.779076810897287e-05 4.320655989299092 -1.212667484595561 S(ph)PTMEQAVQTASAHLPAPAAVGR ddPTM_KYSE-520_SHP099_60min_R1 7 SPTMEQAVQTASAHLPAPAAVGR 23 0 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.866)PT(0.134)MEQAVQTASAHLPAPAAVGR;S(0.81)PT(0.19)MEQAVQTASAHLPAPAAVGR;S(0.97)PT(0.03)MEQAVQTASAHLPAPAAVGR;S(0.972)PT(0.028)MEQAVQTASAHLPAPAAVGR;S(0.971)PT(0.029)MEQAVQTASAHLPAPAAVGR;S(0.575)PT(0.425)MEQAVQTASAHLPAPAAVGR;S(0.948)PT(0.052)MEQAVQTASAHLPAPAAVGR 238.12 2.0166999999999999e-28 4048620000.0 948706.0 967923.0 1220887.0 1345170.0 868405.0 1086229.0 700600.0 811056.0 978568.0 989197.0 True False 896079.3869814752 921422.5261979565 1299587.3295082664 1473014.5523598928 936743.5329514428 1079449.4418948106 771423.4851970867 808242.636037894 800884.7188918147 980433.4841636209 0.9139624476880186 0.9398113600577352 1.3255232001963972 1.502411510982286 0.9554381282178988 1.1009920196836784 0.786818787462329 0.8243727382764595 0.8168679791419262 1.0 19.90306023099151 -6.5730461752108065 2.2373753987600113 0.8422925087471751 1.1501117730778279 0.32744871043139157 0.18128663180821 0.37196810417348375 3.7692794843237687 0.08683816369030288 0.06492357215697024 2.672722223442735e-07 6.5730461752108065 0.30781926433065276 S(ph)PTNSLLK ddPTM_KYSE-520_SHP099_60min_R1 5 SPTNSLLK 8 0 Q14106-2;Q14106 Q14106-2 TOB2 Protein Tob2 1 S(0.975)PT(0.025)NSLLK;S(1)PTNSLLK;S(0.997)PT(0.003)NSLLK;S(0.996)PT(0.004)NSLLK;S(1)PTNSLLK 156.57 0.0002833 3712450000.0 3903490.0 3432950.0 3128260.0 2986040.0 3276930.0 3165850.0 3186250.0 3463960.0 4122820.0 3340280.0 True False 3686955.6282856 3268025.9290369935 3329912.6449929713 3269832.343814339 3534805.7478187834 3146090.755837571 3508347.2448033323 3451944.331254343 3374219.81583452 3310687.717898519 1.1136524923063174 0.9871139193736445 1.00580692856971 0.9876595506536893 1.0676953095601915 0.9502831507873455 1.0597034645811534 1.0426668491238695 1.0191900001901504 1.0 21.658699503620966 S(ph)PTPAPFS(ph)PFNPTSLIK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTPAPFSPFNPTSLIK 17 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 2 S(0.797)PT(0.203)PAPFS(1)PFNPTSLIK 124.18 8.2317e-05 31802000.0 104760.0 92881.0 75999.0 61022.0 91294.0 65048.0 63860.0 79714.0 113950.0 96620.0 True False 98948.75396611748 88418.85734277676 80898.01714269932 66821.51253306668 98478.3184081953 64642.01130366951 70315.5920135397 79437.49073938756 93259.55244573936 95764.02196922246 1.0332560384516698 0.9232993302139465 0.8447641972336863 0.6977726202283191 1.0283435927518287 0.6750135382204892 0.7342589687402477 0.8295128912287949 0.9738474901953469 1.0 16.547196124491702 -4.466917105267751 2.3769925018967872 0.8326616485273783 1.0413738248133326 0.18357595142243566 0.11797399645256916 0.5811199566706854 5.311157125540158 0.030848405315721077 0.20671855392475116 3.412580420705811e-05 4.466917105267751 0.2087121762859543 S(ph)PTPAPFSPFNPTSLIK ddPTM_KYSE-520_SHP099_60min_R1 2 SPTPAPFSPFNPTSLIK 17 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.868)PT(0.109)PAPFS(0.022)PFNPTSLIK;S(0.885)PT(0.115)PAPFSPFNPTSLIK 122.52 3.1204e-05 41686000.0 122489.0 132107.0 114238.0 103503.0 107464.0 118812.0 105699.0 127863.0 156092.0 123966.0 True False 115694.29099423217 125760.3814233503 121601.96426726262 113339.89400068844 115920.8054134806 118070.45023692642 116384.08644283026 127419.47309644862 127749.62755910793 122867.75768408846 0.94161636197268 1.0235425777582694 0.9896979204253049 0.9224543211092239 0.9434599247064513 0.9609555221191826 0.9472304910298054 1.0370456456449975 1.0397327172485031 1.0 16.906746855306384 -7.265178776497673 24.972911824434835 1.028791890615879 0.9625762157640327 0.515555957965355 0.028498976420475088 278.8079426993474 1861950.309385716 0.015932173444273504 0.008114468064676295 5.4302674954815265e-08 7.265178776497673 -0.06621567485184632 S(ph)PTPESSTIASYVTLR ddPTM_KYSE-520_SHP099_60min_R1 5 SPTPESSTIASYVTLR 16 0 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;A0JP02;Q9HAU0-5;H0YGJ6 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 S(0.991)PT(0.009)PESSTIASYVTLR;S(0.984)PT(0.016)PESSTIASYVTLR;S(0.953)PT(0.047)PESSTIASYVTLR;S(0.999)PT(0.001)PESSTIASYVTLR;S(0.979)PT(0.02)PESSTIASYVTLR 217.77 6.1262e-18 6295110000.0 439721.0 388399.0 318055.0 361320.0 306375.0 440321.0 312267.0 435108.0 515517.0 462545.0 True False 415328.7995679181 369739.72904121585 338557.3342059931 395659.7441651804 330484.96946470626 437572.7933102186 343833.9957922329 433598.7119029703 421912.10792602255 458447.211154565 0.9059468341446415 0.8065044786946223 0.7384870623454374 0.8630431913169261 0.7208790050928756 0.9544671287414407 0.7499969187865987 0.9457985594698775 0.9203068481177331 1.0 18.806396095737945 -7.618907416962275 1.1145752297381715 0.9960308666359831 0.8154640312345106 0.39337438008735304 0.07418520761225675 0.4533289435014463 1.0757257912154377 0.06497836101339377 0.02230361508688367 2.4048754174821575e-08 7.618907416962275 -0.18056683540147245 S(ph)PTPKS(ph)PPSR ddPTM_KYSE-520_SHP099_60min_R1 3 SPTPKSPPSR 10 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 2 S(0.996)PT(0.068)PKS(0.828)PPS(0.108)R;S(0.997)PT(0.003)PKS(0.995)PPS(0.005)R;S(0.938)PT(0.086)PKS(0.967)PPS(0.01)R 121.21 0.0016497 865880000.0 2264580.0 2037550.0 2106040.0 1905490.0 1908510.0 2044360.0 1922630.0 2063530.0 2881870.0 2080300.0 True False 2138959.2330716895 1939663.0395750965 2241798.7081831433 2086587.196693542 2058698.8790635203 2031600.3909231604 2116988.20346057 2056372.0960615228 2358595.054030745 2061870.1604489074 1.0373879374664399 0.9407299629152186 1.0872647323704718 1.0119876783314294 0.9984619393372972 0.9853192649535426 1.0267320629925902 0.997333457512093 1.1439105620099934 1.0 20.975522055873917 -7.695731292620288 24.999996844969083 1.0719687282678814 1.0102047779492767 0.20678843306491956 0.048019054381935065 71.65964739483582 27263.643288188883 0.030151363857138985 0.011396134946715212 2.0149705700889873e-08 7.695731292620288 -0.06176395031860471 S(ph)PTPPLFSLPEAR ddPTM_KYSE-520_SHP099_60min_R1 5 SPTPPLFSLPEAR 13 0 A0A087WWS1;Q96FV9;J3KRD7;J3QQZ3;J3KT14;Q96FV9-2 A0A087WWS1 THOC1 THO complex subunit 1 1 S(0.823)PT(0.175)PPLFS(0.002)LPEAR;S(0.998)PT(0.002)PPLFSLPEAR;S(0.997)PT(0.003)PPLFSLPEAR;S(0.997)PT(0.003)PPLFSLPEAR;S(0.998)PT(0.002)PPLFSLPEAR 177.12 1.9930000000000002e-06 401650000.0 125028.0 141205.0 130042.0 124792.0 116223.0 116897.0 132824.0 148824.0 183267.0 156470.0 True False 118092.4476028612 134421.29984697403 138424.71539455664 136652.1941599171 125369.08888158792 116167.40246225955 146251.14615731902 148307.7642797829 149990.33258511045 155083.79753181778 0.7614750830345945 0.8667655937390588 0.8925801250524364 0.8811506832741882 0.8083957890950314 0.7490621477619288 0.9430459434507553 0.9563072780014644 0.9671566918803215 1.0 17.2426884422968 -6.909744759180318 7.36506949370402 0.967038111185725 0.8332733591976563 0.6924580037807561 0.04585863346707346 0.14978981058962726 10.426284822064948 0.02078210475696646 0.013971585018192172 1.2309920291452964e-07 6.909744759180318 -0.1337647519880687 S(ph)PTPPPSSKPSSIPR ddPTM_KYSE-520_SHP099_60min_R1 1 SPTPPPSSKPSSIPR 15 1 H7C5F9;B4E2D5;R4GND2;F6S7C4;Q8NEM7-2;Q8NEM7;Q8NEM7-3 H7C5F9 SUPT20H Transcription factor SPT20 homolog 1 S(0.843)PT(0.152)PPPS(0.004)S(0.001)KPSSIPR 75.682 0.009546500000000001 918300000.0 1496800.0 1753600.0 1272800.0 1118400.0 1326200.0 2034500.0 1750700.0 2415600.0 2791900.0 2398500.0 True False 1413769.5202031755 1669354.4237927385 1354846.7245520044 1224692.3997407788 1430564.3949541992 2021801.930840544 1927677.8411854696 2407220.847405278 2284961.33807161 2377251.156004761 0.5947076801843584 0.7022204698801271 0.5699215756525184 0.5151716496792088 0.6017725099599591 0.8504788927049721 0.8108852261219004 1.012606867946963 0.961177926993522 1.0 21.180862901035837 -6.601694281388693 1.3804395292717202 0.9825565749733519 0.5930941856880984 0.8757073629178578 0.06349740594858758 0.14707190755562977 0.571222970659437 0.03733643103623585 0.025250109015949398 2.5021060822548874e-07 6.601694281388693 -0.38946238928525356 S(ph)PTPRPGSIPTR ddPTM_KYSE-520_SHP099_60min_R1 2 SPTPRPGSIPTR 12 1 Q309B1-2;J3QLP0 Q309B1-2 TRIM16 1 S(0.956)PT(0.043)PRPGSIPTR;S(0.984)PT(0.016)PRPGSIPTR 55.841 0.037689999999999994 1095070000.0 484290.0 423220.0 395023.0 366660.0 413440.0 378050.0 374055.0 397468.0 461080.0 426390.0 True False 457425.46829181927 402887.87593382865 420486.8146391472 401507.2561596517 445975.37584818574 375690.449719473 411868.12982500135 396089.27627772884 377359.4948809268 422612.51632640004 1.082375581935041 0.9533268901639976 0.9949700929216894 0.9500600210561488 1.055281986735437 0.8889714222976602 0.9745762700196499 0.9372398141937985 0.8929207732917154 1.0 18.688975969997948 -6.2652086753001495 24.99510709216355 0.9370588099656526 1.0003555949284895 0.32203829079844715 0.049136836681556564 427.2220510017431 2833002.380844654 0.01622991278893104 0.014841406678683123 5.429893664098933e-07 6.2652086753001495 0.06329678496283686 S(ph)PTPRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SPTPRPR 7 1 Q9HBI1 Q9HBI1 PARVB Beta-parvin 1 S(0.997)PT(0.003)PRPR 78.264 0.01143 455980000.0 136060.0 134120.0 114980.0 79774.0 103170.0 106720.0 106670.0 79390.0 113660.0 82968.0 True False 128512.48057111443 127676.67388177576 122391.7947745046 87355.69697507231 111288.89204299859 106053.92089422596 117453.24459887695 79114.61461976521 93022.2091354343 82232.96806812729 1.5627853838942807 1.5526214957485163 1.4883543382881066 1.0622953181344617 1.353336680621809 1.289676432527205 1.4282987390357944 0.9620790356760731 1.1312033521442213 1.0 16.32742928115582 -1.0000000000010094 0.1605948717291521 0.9395352526663784 3.526209417047271 0.6016972759803405 0.1374146930757758 45.51953586032158 0.47207039985133015 0.42674413775149567 27.88619200248462 0.09999999999976758 1.0000000000010094 2.586674164380893 S(ph)PTQSQPAFLATNEEK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTQSQPAFLATNEEK 16 0 A0A0A0MR27;J3QT39;Q49A88-2;Q49A88-3;Q49A88-6;Q49A88;C9JSI8;Q49A88-4 A0A0A0MR27 CCDC14 Coiled-coil domain-containing protein 14 1 S(0.5)PT(0.5)QSQPAFLATNEEK 162.26 6.1394e-08 197670000.0 134500.0 111570.0 103660.0 110070.0 103100.0 128040.0 103680.0 140200.0 124460.0 134930.0 True False 127039.01688089735 106210.00973001576 110342.08946186429 120531.01970624775 111213.38344124428 127240.85486597351 114160.986219289 139713.67892292608 101861.20138127894 133734.62517395162 0.94993362201939 0.7941848238021083 0.8250824296126741 0.9012701052511297 0.8315975260452299 0.9514428645570919 0.8536382112769767 1.0447083449121526 0.7616666308279235 1.0 17.029013515780296 -6.258596793470988 24.999999296918087 0.9207946696803857 0.8570412706599946 0.12167768738247264 0.08282752149202208 535.3765303826274 4708549.3356329845 0.026067257853031597 0.024993920132152275 5.513193132837013e-07 6.258596793470988 -0.06375339902039112 S(ph)PTS(ph)PLNMK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTSPLNMK 9 0 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 2 S(0.999)PT(0.001)S(1)PLNMK 130.95 0.00059294 602260000.0 1295200.0 1059300.0 944960.0 1173700.0 1118200.0 1123200.0 1129400.0 1190000.0 1199800.0 1220300.0 True False 1223352.6740828112 1008409.6379582844 1005873.6335894592 1285248.0951142274 1206195.978312312 1116189.692170114 1243570.7738818016 1185872.1677480869 981946.5644966925 1209489.0913790346 1.0114623462109689 0.8337484357205045 0.8316516790098395 1.0626371947255961 0.997277269311319 0.922860487230569 1.028178577835628 0.9804736365137281 0.8118688886867903 1.0 20.205966326749213 -5.246228996087592 24.99176469059019 0.9724449267933727 0.8864335874118004 0.1748118251926548 0.07895158954591495 1360.3803134857872 2235201.0331897116 0.021419719587515828 0.03691046610274294 5.672454276816545e-06 5.246228996087592 -0.08601133938157224 S(ph)PTS(ph)SPTPQR ddPTM_KYSE-520_SHP099_60min_R1 2 SPTSSPTPQR 10 0 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 2 S(0.986)PT(0.239)S(0.483)S(0.292)PT(0.001)PQR;S(0.999)PT(0.087)S(0.646)S(0.267)PT(0.001)PQR 93.345 0.0033280000000000002 421220000.0 443713.0 386875.0 387444.0 372213.0 402862.0 370963.0 327945.0 410589.0 474440.0 348168.0 True False 419099.35537006374 368288.9442887861 412419.2601723187 407588.0116100812 434564.94742877263 368647.68231526215 361096.8810347677 409164.7625911934 388293.6556591193 345083.5023906048 1.214486790781668 1.0672458745127569 1.195128881314922 1.181128650852531 1.2593037465375048 1.06828544326638 1.046404358751515 1.1856978376441019 1.125216514174602 1.0 18.396585978090894 -6.289645795364968 24.97043377139772 1.0943071611454116 1.1775214209385245 0.3611250795917109 0.0645846872920312 980.3455012096318 867871.7821651062 0.023191221322313285 0.020455972241554942 5.132798373355696e-07 6.289645795364968 0.08321425979311292 S(ph)PTSS(ph)PTPQR ddPTM_KYSE-520_SHP099_60min_R1 2 SPTSSPTPQR 10 0 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 2 S(0.983)PT(0.045)S(0.416)S(0.555)PTPQR;S(0.977)PT(0.023)S(0.084)S(0.916)PTPQR 172.51 4.029e-05 5631600000.0 2688970.0 2346030.0 2095990.0 2254980.0 2273570.0 2201490.0 2177530.0 2294700.0 2836590.0 2124180.0 True False 2539807.4737712005 2233323.197337176 2231100.8691025726 2469292.621215542 2452487.0241562487 2187749.684308747 2397655.983044836 2286740.2212870056 2321536.760614831 2105361.4177870345 1.2063522454215088 1.0607790085203725 1.0597234518754048 1.172859253691007 1.164876967648662 1.0391326001444026 1.1388334386620589 1.086150910702363 1.1026784954836972 1.0 21.005636484749793 -13.999999999999998 0.204206736227684 0.47137427359848344 1.1296536933269394 0.3311018170258696 0.051272910850823694 179.50570044309436 1.7824591387646214 38.65888165379784 0.11819125624650444 1.0000000000000041e-14 13.999999999999998 0.658279419728456 S(ph)PTSSPTPQR ddPTM_KYSE-520_SHP099_60min_R1 1 SPTSSPTPQR 10 0 A0A0D9SFE4;A0A0D9SFB1;A0A0U1RQP1;Q05193-5;Q05193-3;Q05193-2;Q05193 A0A0D9SFE4 DNM1 Dynamin-1 1 S(0.996)PT(0.004)SSPTPQR 106.4 0.0011682 333320000.0 101910.0 89234.0 77292.0 75065.0 98060.0 111590.0 77999.0 85067.0 106120.0 85020.0 True False 96256.84914745163 84947.06469703531 82274.36599157251 82199.15503088472 105776.76411492137 110893.52541779114 85883.90011688208 84771.92243178708 86851.28306750226 84266.788944559 1.1422869003680818 1.0080728809178179 0.9763557745828272 0.9754632407432231 1.255260410889921 1.315981382543845 1.0191903737234727 1.0059944551531497 1.030670376257527 1.0 16.3626765306988 -6.9524552105587825 24.999855958766915 1.0135147860184028 1.107107698523709 0.1712171976506105 0.10563274193616477 260.27086005851334 136854.19152254192 0.05051628428369984 0.03405806102877429 1.1156932085315091e-07 6.9524552105587825 0.0935929125053061 S(ph)PTTTQSPK ddPTM_KYSE-520_SHP099_60min_R1 2 SPTTTQSPK 9 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.973)PT(0.027)TTQSPK;S(0.762)PT(0.225)T(0.01)T(0.003)QSPK 110.08 0.00094837 2168600000.0 1140950.0 809440.0 882460.0 807920.0 1007740.0 1254340.0 1363540.0 1173660.0 1368720.0 1398610.0 True False 1077659.229072564 770553.2874057901 939344.7835859221 884704.4738899957 1087043.4047437387 1246511.1987862014 1501379.9300679914 1169588.8473943044 1120194.9506233665 1386219.4035021132 0.7774088476542677 0.5558667592295143 0.6776306703057127 0.6382138871053878 0.7841784655426529 0.8992163835227266 1.083075252211114 0.8437256356673999 0.8080935440618789 1.0 20.40272418703999 -6.049268602071756 2.553673536337359 0.9276502264510691 0.6556913371411547 0.6676544934261095 0.08799975824961498 0.17605518759586125 2.2807438416139365 0.031708876426747426 0.033496037784055716 8.927531637549275e-07 6.049268602071756 -0.2719588893099144 S(ph)PTTVLFTS(ph)SPIK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTTVLFTSSPIK 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 2 S(0.992)PT(0.004)T(0.003)VLFT(0.001)S(0.715)S(0.284)PIK 168.4 7.7566e-07 80942000.0 276780.0 266140.0 230590.0 201730.0 242810.0 248440.0 227640.0 237110.0 310340.0 214390.0 True False 261426.46165274878 253354.23491571553 245454.2003570446 220902.35854766384 261917.76560008255 246889.393805861 250652.07275230484 236287.52075189026 253990.07903475905 212490.671392896 1.2302961816585836 1.192307564633097 1.155129299314975 1.039586147945359 1.2326083017347884 1.1618834473413735 1.1795909491426486 1.1119900897437225 1.1952999036137943 1.0 17.697039980954813 -13.017240737806022 0.38542197183827476 8.868372695954413e-14 1.1676979482682446 0.4570732222134738 0.054292624240796526 260.1740151682054 4.096664705815599 212.3097117532252 0.03664193561749173 9.61079385864484e-14 13.017240737806022 1.167697948268156 S(ph)PTTVLFTSS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 3 SPTTVLFTSSPIK 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 2 S(0.999)PT(0.001)TVLFTS(0.017)S(0.983)PIK;S(0.983)PT(0.017)TVLFTS(0.009)S(0.991)PIK;S(0.976)PT(0.024)TVLFTS(0.113)S(0.887)PIK 281.14 5.7142999999999995e-24 1195970000.0 2386660.0 2065180.0 1775850.0 2104470.0 2059910.0 2002160.0 1957820.0 2063250.0 2350630.0 1892920.0 True False 2254267.2121112435 1965965.6529016236 1890324.1324604643 2304478.1960680247 2222013.197715358 1989663.7767764556 2155735.552081875 2056093.0673161692 1923814.8465601446 1876150.2014694766 1.2015387735723986 1.0478722073327604 1.0075547954422233 1.2283015476389174 1.184347178586761 1.0605034582082344 1.1490207715743739 1.0959106929209368 1.0254055592421838 1.0 20.839343901570214 -7.759368405700335 2.737001463442207 1.0013143685817398 1.1220204257412232 0.3092189685420188 0.06684977266107078 0.34812251273361655 4.893773131984309 0.06411224550520267 0.018248179952568194 1.74032995043752e-08 7.759368405700335 0.12070605715948335 S(ph)PTVLCQK ddPTM_KYSE-520_SHP099_60min_R1 2 SPTVLCQK 8 0 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 S(0.993)PT(0.007)VLCQK;S(0.999)PT(0.001)VLCQK 86.882 0.0049559 3266200000.0 3268100.0 2756000.0 2760900.0 2840600.0 2918100.0 3227500.0 2922600.0 3203700.0 3666900.0 2973500.0 True False 3086811.978204167 2623597.623159665 2938872.0315961917 3110569.7699424694 3147737.8682821947 3207355.975319666 3218044.9298272966 3192587.1124492013 3001083.395026611 2947157.1033479967 1.0473863014284244 0.8902130192446256 0.9971887919573771 1.0554475587368024 1.068059067738987 1.0882880901313612 1.091914959732404 1.0832768666530854 1.0182977322849038 1.0 21.490892537210556 -5.1834335103626055 3.5178948923458915 1.065009363751191 0.964385877039281 0.39068104701707096 0.04548970268790462 0.201543406973993 4.819595902743439 0.012145114212952243 0.022217492054312463 6.554906324880958e-06 5.1834335103626055 -0.10062348671191002 S(ph)PTVPSQNPSR ddPTM_KYSE-520_SHP099_60min_R1 1 SPTVPSQNPSR 11 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.999)PT(0.001)VPSQNPSR 81.709 0.013908000000000002 204940000.0 505890.0 554360.0 530820.0 442040.0 509620.0 555560.0 473200.0 485450.0 647680.0 516970.0 True False 477827.2732332866 527727.7134886761 565037.506542029 484051.3486958273 549724.1946588447 552092.5439654818 521035.67398695636 483766.0872548813 530077.6386841298 512390.04799657373 0.9325459678648594 1.0299335741435105 1.1027487921580539 0.9446931114069258 1.0728627474484451 1.0774849084679599 1.016873134098109 0.9441363842767613 1.0345197779635142 1.0 18.966882929340763 -7.0126116145745 24.471427126829628 0.9896977966473365 1.0302251482603308 0.06716009940319012 0.05509914069233961 1123.3502143100957 2179729.8858158854 0.02455080742734692 0.015121404886922039 9.713782732817535e-08 7.0126116145745 0.04052735161299437 S(ph)PVEGLGR ddPTM_KYSE-520_SHP099_60min_R1 4 SPVEGLGR 8 0 A6NCC9;E9PME3;C9JHT9;C9JJV1;Q9Y5U2-2;Q9Y5U2 A6NCC9 TSSC4 Protein TSSC4 1 S(1)PVEGLGR;S(1)PVEGLGR;S(1)PVEGLGR;S(1)PVEGLGR 126.49 0.00085996 2723170000.0 2069660.0 1784390.0 1830330.0 1613170.0 1785370.0 1697830.0 1661470.0 1685160.0 2139170.0 1677260.0 True False 1954851.834035075 1698665.2259760054 1948316.0004315428 1766485.191782752 1925868.4616342804 1687233.2131919386 1829427.6019845905 1679314.573279299 1750750.65208734 1662400.7812885346 1.175920906702089 1.02181450171081 1.171989343581392 1.0626109008524052 1.1584862587357128 1.0149376926327935 1.1004732568560227 1.0101743166757022 1.0531459512009642 1.0 20.664836806711197 -6.976330936256674 0.5790999365869857 1.0047725370723122 1.1178701768265518 0.34231677075836553 0.053835177954294336 0.9333477692250746 0.6443778895083805 0.047035316916927444 0.031658089416181034 1.0560125116217185e-07 6.976330936256674 0.11309763975423959 S(ph)PVEMDEDFDVIFDPYAPK ddPTM_KYSE-520_SHP099_60min_R1 11 SPVEMDEDFDVIFDPYAPK 19 0 O95425-2;O95425-3;A0A6I8PIX7;O95425-4;O95425;A0A0J9YWY6 O95425-2 SVIL Supervillin 1 S(1)PVEMDEDFDVIFDPYAPK;S(1)PVEMDEDFDVIFDPYAPK;S(1)PVEMDEDFDVIFDPYAPK;S(1)PVEMDEDFDVIFDPYAPK;S(1)PVEMDEDFDVIFDPYAPK;S(1)PVEMDEDFDVIFDPYAPK;S(1)PVEMDEDFDVIFDPYAPK;S(1)PVEMDEDFDVIFDPYAPK;S(1)PVEMDEDFDVIFDPYAPK;S(1)PVEMDEDFDVIFDPYAPK;S(1)PVEMDEDFDVIFDPYAPK 199.58 2.5813000000000003e-13 460114300.0 749906.0 781261.0 632283.0 641437.6 629733.8 637115.6 638107.6 743527.0 885999.0 724555.0 True False 708307.2192794508 743728.0488633307 673040.9738685698 702399.6366487527 679290.267364809 633139.1252143679 702613.7435380373 740947.8783775057 725123.9158172238 718136.006395261 0.9863134740101022 1.0356367627304066 0.9372054428059537 0.9780872013011878 0.94590754580676 0.8816423624160811 0.9783853438359971 1.0317653923199737 1.0097306211633075 1.0 19.45389757359703 -7.011722638172562 24.889872311071866 1.0134638888708944 0.9604684641039806 0.284765422861635 0.037583984600578914 756.1652965006268 1605510.2497709522 0.018250750805031427 0.011305459590512745 9.733686664430172e-08 7.011722638172562 -0.05299542476691388 S(ph)PVFNHSLYR ddPTM_KYSE-520_SHP099_60min_R1 1 SPVFNHSLYR 10 0 G3V1P5;Q96RN5-3;Q96RN5-2;Q96RN5 G3V1P5 MED15 Mediator of RNA polymerase II transcription subunit 15 1 S(1)PVFNHSLYR 105.46 0.0086417 0.0 90936.0 83014.0 91717.0 90663.0 82345.0 87708.0 100450.0 98441.0 99953.0 81763.0 True False 85891.59880357819 79025.88283344568 97629.22457238866 99279.58426117523 88825.08302104034 87160.58183836925 110604.46629752689 98099.53114730214 81804.05481008334 81038.64343065141 1.0598844596538648 0.9751629529814606 1.2047243196504713 1.2250894148559317 1.0960830445915861 1.0755434462937015 1.364836103064538 1.2105278049385233 1.0094450171798215 1.0 16.30632240348795 -4.7613073427562 24.99999392937515 1.161815263969195 1.017523684747573 0.1848284707679405 0.1068590167057252 4.964581973447346 939005.0158816039 0.02776724693982109 0.06464023956296434 1.732577448456773e-05 4.7613073427562 -0.14429157922162195 S(ph)PVFS(ph)DEDSDLDFDISKLEQQSK ddPTM_KYSE-520_SHP099_60min_R1 2 SPVFSDEDSDLDFDISKLEQQSK 23 1 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 2 S(1)PVFS(0.983)DEDS(0.017)DLDFDISKLEQQSK;S(0.994)PVFS(0.898)DEDS(0.108)DLDFDISKLEQQSK 65.581 0.01455 63034000.0 282250.0 305270.0 274940.0 208372.0 253660.0 226840.0 190383.0 202118.0 351170.0 198533.0 True False 266593.0298485744 290604.3709803881 292663.0723195539 228175.61223067364 273621.5988720274 225424.20741797445 209628.77159902483 201416.89983269607 287406.38027529913 196774.15207633667 1.354817322476136 1.4768421965688403 1.487304451481097 1.159581224581545 1.3905362873365528 1.1455986725864444 1.0653267687196097 1.023594296849305 1.4605901092324491 1.0 17.58618119755096 -5.726386426637858 1.0529198294446998 1.1379291147157358 1.4414287076400711 0.3924163147092682 0.14569811252084033 0.5352337220273927 1.2614799832482426 0.06348444300080906 0.10094165912996553 1.8776453815955931e-06 5.726386426637858 0.30349959292433537 S(ph)PVFSDEDS(ph)DLDFDISK ddPTM_KYSE-520_SHP099_60min_R1 1 SPVFSDEDSDLDFDISK 17 0 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 2 S(0.999)PVFS(0.039)DEDS(0.962)DLDFDISK 71.558 0.014966 0.0 44953.0 42780.0 38373.0 35358.0 31939.0 41067.0 29962.0 37868.0 44951.0 43176.0 True False 42459.367478416156 40724.78458591087 40846.58497897081 38718.41368922966 34452.417591948564 40810.68561996984 32990.85136094077 37736.64474645765 36789.03152249616 42793.49423041972 0.9921921133571269 0.9516583143837246 0.9545045505990732 0.9047733629965349 0.8050854040205507 0.9536656530132003 0.7709314687719343 0.8818313490192299 0.8596874871775418 1.0 15.385103864144902 -5.337405424170252 3.0884650337856305 0.8700847412093627 0.9668927435111883 0.2725895767208931 0.06273866139382699 0.30065437377100845 5.593694549953987 0.017274658962459336 0.028191423113887882 4.59827113671179e-06 5.337405424170252 0.09680800230182551 S(ph)PVFTPR ddPTM_KYSE-520_SHP099_60min_R1 4 SPVFTPR 7 0 P52735-3 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 1 S(1)PVFTPR;S(1)PVFTPR;S(1)PVFTPR;S(1)PVFTPR 116.73 0.0026921 2379260000.0 1839990.0 1624430.0 1350790.0 1274130.0 1778560.0 1779860.0 1427610.0 1564370.0 1635940.0 1462250.0 True False 1737922.0867708724 1546389.9444808613 1437864.0847404173 1395222.9321188466 1918522.5533778784 1768751.2335344555 1571926.750930934 1558943.5655967016 1338894.534691382 1449295.6026132843 1.1991494927861188 1.0669941602613726 0.99211236282491 0.9626903784176692 1.3237620744301657 1.2204213069750214 1.084614310632371 1.0756560378612248 0.9238243269883427 1.0 20.466920450575007 -7.602875335905379 3.7456798901815263 0.9629868979278068 1.1181448737900939 0.2688741268207553 0.10316786426022888 0.35160800423220784 9.405236801203966 0.08768439203682117 0.029495422788664436 2.495310902359832e-08 7.602875335905379 0.15515797586228708 S(ph)PVGKS(ph)PPSTGSTYGSSQK ddPTM_KYSE-520_SHP099_60min_R1 8 SPVGKSPPSTGSTYGSSQK 19 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 S(1)PVGKS(0.959)PPS(0.015)T(0.001)GSTY(0.021)GS(0.003)S(0.001)QK;S(1)PVGKS(0.965)PPS(0.012)T(0.003)GS(0.004)T(0.004)Y(0.007)GS(0.003)S(0.003)QK;S(1)PVGKS(0.969)PPS(0.026)T(0.004)GS(0.001)TYGSSQK;S(1)PVGKS(0.965)PPS(0.029)T(0.004)GS(0.001)TYGSSQK;S(1)PVGKS(0.836)PPS(0.118)T(0.02)GS(0.02)T(0.005)YGSSQK;S(1)PVGKS(0.608)PPS(0.337)T(0.047)GS(0.004)T(0.004)YGSSQK;S(1)PVGKS(0.802)PPS(0.169)T(0.027)GS(0.001)TYGSSQK;S(1)PVGKS(0.711)PPS(0.201)T(0.04)GS(0.04)T(0.009)YGSSQK 127.53 1.09e-05 47672760000.0 6970750.0 5714150.0 5015750.0 6688510.0 6178400.0 5971950.0 6855220.0 6625430.0 6106530.0 6008400.0 True False 6584068.60165438 5439633.656885985 5339073.270483746 7324183.979426136 6664604.929712728 5934676.8448676225 7548212.538099865 6602447.929716987 4997738.085094181 5955170.250464466 1.1056054360731102 0.9134304189643827 0.8965441869722082 1.229886581135929 1.119129201922133 0.9965587204504782 1.2675057505721439 1.108691716949996 0.8392267349039078 1.0 22.5057113227519 -3.9173684131057476 20.238326856461534 1.0514785839094436 3.6510265624501064 0.015219177235629155 0.13421108208226448 3104.030879289857 809128.3010959164 0.0333495704935771 23672.919576244763 0.00012095716155570592 3.9173684131057476 2.599547978540663 S(ph)PVGKS(ph)PPSTGSTYGSSQKEESAASGGAAYTK ddPTM_KYSE-520_SHP099_60min_R1 1 SPVGKSPPSTGSTYGSSQKEESAASGGAAYTK 32 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 S(1)PVGKS(0.712)PPS(0.242)T(0.043)GS(0.001)T(0.001)YGSSQKEESAASGGAAYTK 255.93 1.4432e-32 2125000000.0 2232800.0 1916400.0 1821600.0 1853600.0 1864600.0 1728700.0 1828800.0 1986900.0 2159000.0 1703600.0 True False 2108942.1330235503 1824333.2674249536 1939023.2506630518 2029765.5866948387 2011333.4118772435 1717910.5420712947 2013672.9513680157 1980007.9076459485 1766980.02396096 1688507.4293807421 1.2489978405348219 1.0804413624013638 1.1483652466807244 1.2021063996379646 1.1911901463263903 1.0174136709018426 1.1925757129221088 1.1726379601255967 1.0464745331970482 1.0 20.687317096497324 -7.892220886604831 4.109173725533289 1.0019629687865335 1.152971663118695 0.42903561208615937 0.06239409470712769 0.1943283462094549 5.520773357061554 0.05882807305064328 0.015527509123742305 1.2816785420686923e-08 7.892220886604831 0.15100869433216157 S(ph)PVGKSPPS(ph)TGSTYGSSQKEESAASGGAAYTK ddPTM_KYSE-520_SHP099_60min_R1 2 SPVGKSPPSTGSTYGSSQKEESAASGGAAYTK 32 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 S(0.9)PVGKS(0.354)PPS(0.601)T(0.13)GS(0.006)T(0.006)Y(0.001)GSSQKEESAASGGAAYTK;S(1)PVGKS(0.048)PPS(0.763)T(0.145)GS(0.023)T(0.02)YGSSQKEESAASGGAAYTK 195.07 1.0407e-15 4018400000.0 1385840.0 1363070.0 1009280.0 1196180.0 1139990.0 1195210.0 1087810.0 1246590.0 1417770.0 1229490.0 True False 1308964.6925964504 1297586.0711902184 1074339.8037050979 1309864.5875553687 1229700.7273441711 1187750.2510493605 1197776.4508025162 1242265.8702462919 1160338.7070732438 1218597.6751287456 1.0741565648056546 1.0648190930227466 0.8816197713421644 1.0748950324535789 1.0091113354653762 0.9746861292213396 0.9829137829890988 1.0194224850421167 0.9521917945154895 1.0 20.21679046238482 -4.564080347419338 24.999942930230294 0.9897329172935118 1.0718232317109448 0.331334854495549 0.04689470276089767 138.4439877319127 84003.31358906686 0.011384641839399511 0.030120969898075247 2.728472950143133e-05 4.564080347419338 0.08209031441743309 S(ph)PVGMLDLSSWSSPEVLR ddPTM_KYSE-520_SHP099_60min_R1 1 SPVGMLDLSSWSSPEVLR 18 0 O95613-2;O95613 O95613-2 PCNT Pericentrin 1 S(1)PVGMLDLSSWSSPEVLR 60.448 0.025216 19313000.0 12439.0 14085.0 12786.0 8803.5 12142.0 14085.0 15551.0 13057.0 18204.0 14632.0 True False 11748.983873468258 13408.335457983985 13610.206018323324 9640.181993131213 13097.506321470286 13997.09029043454 17123.046843134303 13011.708314526712 14898.612485495749 14502.371863523735 0.8101422294251894 0.9245615533903484 0.9384813840386772 0.6647314028250877 0.9031285671561797 0.9651586941884951 1.1807066460764306 0.897212430971631 1.0273224701242585 1.0 13.82400125192098 -6.257786160509122 3.366085583570557 1.0217646211007279 0.8438552304849586 0.4358535172118133 0.09650365333098837 0.24672802759411688 5.923458849026886 0.03517063291631316 0.03286453494566864 5.523493401052966e-07 6.257786160509122 -0.17790939061576927 S(ph)PVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK ddPTM_KYSE-520_SHP099_60min_R1 1 SPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK 51 0 P16989-2;P16989;P16989-3 P16989-2 YBX3 Y-box-binding protein 3 1 S(0.742)PVGS(0.258)GAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEK 73.176 0.0058738 1242000000.0 225850.0 264820.0 239270.0 264120.0 236250.0 252710.0 256930.0 305270.0 255150.0 297460.0 True False 213321.65027918704 252097.6496970761 254693.72704553604 289221.8853894261 254841.53092137675 251132.74315198485 282902.9917951575 304211.0896205534 208821.1918080774 294824.7358203781 0.7235541132110204 0.8550763184628664 0.8638818121445146 0.9809959960945558 0.8643831400789888 0.8518035043877302 0.9595632842948295 1.0318370633795597 0.7082892526877448 1.0 18.16949804618428 -4.087487434599299 1.3254980617888934 0.9120025779346967 0.5807783311506595 0.28923689948315745 0.08830492923893231 2.502772928707002 2.9048182437566457 0.024793177826298623 1.242686832972792 8.175466916016866e-05 4.087487434599299 -0.3312242467840373 S(ph)PVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKK ddPTM_KYSE-520_SHP099_60min_R1 2 SPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKK 52 1 P16989-2;P16989;P16989-3 P16989-2 YBX3 Y-box-binding protein 3 1 S(0.817)PVGS(0.183)GAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKK;S(0.821)PVGS(0.179)GAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKK 184.13 3.9252999999999994e-18 3674700000.0 959860.0 1007620.0 656140.0 811300.0 803440.0 1001570.0 788660.0 976450.0 1061540.0 1045270.0 True False 906614.6523665292 959212.4227315449 698435.8342611189 888405.7080737597 866666.1570517287 995318.8301164721 868385.4493798653 973062.9228551431 868791.0952457243 1036009.7210077536 0.8751024570354818 0.9258720292686965 0.6741595374044678 0.8575264209003602 0.8365424951888482 0.9607234468304984 0.8382020281963805 0.939241112437265 0.838593574585988 1.0 19.98260610939872 -6.137940297044704 7.980829922983512 0.90663751663421 0.8307627497611949 0.2176160584912703 0.0763399081326862 0.4992360329248238 30.338538924354 0.02492291129593961 0.024947441871213352 7.278798601297114e-07 6.137940297044704 -0.07587476687301509 S(ph)PVIGSEVFLPNSNHVASGAGEAEER ddPTM_KYSE-520_SHP099_60min_R1 1 SPVIGSEVFLPNSNHVASGAGEAEER 26 0 P29590-12;P29590-13;P29590-11;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;H3BVD2 P29590-12;P29590-2 PML Protein PML 1 S(0.999)PVIGS(0.001)EVFLPNSNHVASGAGEAEER 160.12 6.5297e-12 0.0 29126.0 45502.0 61558.0 49848.0 17713.0 29732.0 19591.0 12944.0 22558.0 31112.0 True False 27510.32271875846 43316.015620105565 65526.12717628241 54585.53893265228 19106.91232681628 29546.431559474593 21571.44946973469 12899.10028515231 18462.035840903816 30836.371884769727 0.8921387646237973 1.404705319483438 2.124962282240673 1.770167357451426 0.6196225807048754 0.9581682199801124 0.6995456388431014 0.41830797518443646 0.598709728559939 1.0 14.912345411606472 -5.765915022498078 24.999320312927015 0.6979541076509942 1.5789706764854217 0.603177620835768 0.330136766180594 79.13721288714025 442031.54435269715 0.10865466815257059 0.12741241722829266 1.7142927067978367e-06 5.765915022498078 0.8810165688344275 S(ph)PVISRPK ddPTM_KYSE-520_SHP099_60min_R1 5 SPVISRPK 8 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2 A0A0U1RRM6 ENAH Protein enabled homolog 1 S(1)PVISRPK;S(1)PVISRPK;S(0.999)PVIS(0.001)RPK;S(1)PVISRPK;S(1)PVISRPK 106.29 0.0022023000000000004 11823300000.0 4036610.0 3609360.0 3098720.0 2917250.0 3598880.0 3411470.0 3020840.0 3215690.0 3598310.0 3275230.0 True False 3812691.196517461 3435960.9278401895 3298468.449327302 3194504.562896806 3882091.3811738566 3390177.7503094557 3326215.9877573065 3204535.52193769 2944947.6100134146 3246214.010290381 1.1745039558178751 1.058451758555757 1.0160970406976486 0.9840708446117051 1.1958827633876778 1.0443481974887407 1.0246447021709975 0.9871608932064948 0.9071945351347869 1.0 21.630326683629963 -7.084644794770465 1.9109392595070895 0.95551871275953 1.0762919447645918 0.38995950377493904 0.064741886957503 0.3952375033097403 2.782756034787939 0.04276924336545336 0.02031323429921653 8.229154292994851e-08 7.084644794770465 0.12077323200506174 S(ph)PVLKR ddPTM_KYSE-520_SHP099_60min_R1 2 SPVLKR 6 1 Q6F5E8-2;Q6F5E8 Q6F5E8-2 RLTPR Leucine-rich repeat-containing protein 16C 1 S(1)PVLKR;S(1)PVLKR 95.90899999999999 0.015267 0.0 374810.0 371480.0 398630.0 356410.0 351280.0 347820.0 355200.0 353270.0 413030.0 336930.0 True False 354018.5421347893 353633.54319715226 424326.327630551 390283.09924142616 378923.7374902065 345649.1263627223 391107.0824179348 352044.5888238376 338034.1636389973 333945.06232757313 1.0601101261006989 1.0589572450401028 1.2706471078596788 1.1687045064274373 1.134688846270507 1.035047872705686 1.1711719277774209 1.0541991139803417 1.0122448323772881 1.0 18.34925125729588 -7.487189784836116 3.65846920928006 1.0095773307027014 1.1293937779182028 0.37242309567298715 0.06498218315194615 0.269470771250843 7.4686236718064105 0.04725116572380303 0.018441504501622255 3.2569434286073756e-08 7.487189784836116 0.11981644721550144 S(ph)PVLLCK ddPTM_KYSE-520_SHP099_60min_R1 2 SPVLLCK 7 0 Q8TED9;Q8TED9-2;Q8TED9-3 Q8TED9 AFAP1L1 Actin filament-associated protein 1-like 1 1 S(1)PVLLCK;S(1)PVLLCK 78.149 0.017608000000000002 2668100000.0 3529900.0 2955600.0 2935500.0 3255000.0 3260000.0 3391000.0 3565900.0 4058400.0 4159700.0 3821600.0 True False 3334089.4103188026 2813608.539553952 3124727.0269660694 3564354.2213485613 3516543.453137301 3369835.5111724194 3926375.971830276 4044322.3576376783 3404403.337503661 3787743.5971598118 0.8802310200771838 0.7428191659181202 0.8249573781364461 0.941023099879634 0.9284006065706595 0.8896683275233427 1.0366002531888419 1.0677392104022718 0.8987945593931983 1.0 21.852907243418255 -5.634401810842631 0.8834862565531652 0.9958102307834337 0.7977095003887543 0.5538130134836481 0.06183777183159127 0.468475342213315 0.7689990332500384 0.03056551920241157 0.058786611523298164 2.320588785607083e-06 5.634401810842631 -0.19810073039467935 S(ph)PVLQEK ddPTM_KYSE-520_SHP099_60min_R1 1 SPVLQEK 7 0 A6NFI3 A6NFI3 ZNF316 Zinc finger protein 316 1 S(1)PVLQEK 90.149 0.017324000000000003 0.0 384860.0 321540.0 304830.0 368860.0 354750.0 322980.0 376680.0 364630.0 381630.0 349650.0 True False 363511.0486006106 306092.7357586204 324479.8295452446 403916.343498197 382666.8067486071 320964.16201665235 414758.4904425333 363365.1836352815 312335.61210941244 346552.37302358396 1.0489353901376186 0.8832510165434354 0.9363082027522655 1.1655275650665051 1.1042106086590422 0.926163509475694 1.1968133036397004 1.0485144870456662 0.9012652528804269 1.0 18.402713871797012 -5.202272153884634 24.999862187194502 1.0542996956830397 0.9488733442874338 0.16072888065117175 0.09616123141830121 427.7021255267083 180715.39140783765 0.025974709867740836 0.04498951020473655 6.27664904639675e-06 5.202272153884634 -0.10542635139560597 S(ph)PVPAQIAITVPK ddPTM_KYSE-520_SHP099_60min_R1 10 SPVPAQIAITVPK 13 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK;S(1)PVPAQIAITVPK 189.37 2.5642e-08 22183350000.0 7774480.0 8190980.0 6750030.0 5406413.0 5872230.0 7424200.0 5765000.0 7059860.0 8665560.0 7485640.0 True False 7343214.096358347 7797473.025888355 7185147.734229865 5920236.866022663 6334341.09258174 7377862.813932839 6347782.4609780265 7035370.993443708 7092112.744990798 7419323.053339801 0.9897417922855922 1.0509682581321662 0.9684371043791492 0.7979483874014186 0.8537626744437745 0.9944118568353351 0.8555743449020701 0.9482497180489725 0.955897552108651 1.0 22.822856129196868 -5.003307024576825 24.51366942932751 0.9090737566775726 1.0176919828728652 0.31054340023365845 0.06279830495737743 118.69756434731934 879893.6249543633 0.01661977182339929 0.03349174792649726 9.92414212928799e-06 5.003307024576825 0.1086182261952926 S(ph)PVPSAFSDQSR ddPTM_KYSE-520_SHP099_60min_R1 4 SPVPSAFSDQSR 12 0 Q9UQ35;Q9UQ35-2;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.999)PVPS(0.001)AFS(0.001)DQSR;S(0.999)PVPSAFSDQSR;S(0.997)PVPS(0.002)AFS(0.001)DQSR;S(0.991)PVPS(0.008)AFS(0.001)DQSR 108.32 0.00034622 3387000000.0 1224120.0 1014210.0 953463.0 1404551.0 972220.0 1156700.0 989349.0 1228590.0 1074250.0 1268780.0 True False 1156215.623377278 965485.8292397545 1014924.750574738 1538039.1047463422 1048728.1828248915 1149480.6062439205 1089362.052035758 1224328.3080450618 879193.2796387512 1257539.5962959018 0.9194268131062634 0.7677577963219645 0.8070718039926625 1.2230542157691535 0.8339524146308658 0.9140711033113627 0.8662646132531232 0.9735902643951218 0.699137651194782 1.0 20.26217239637714 -4.2564940111519185 0.005985163157818339 1.7750876305859165 4.103659433543352e-07 0.010290285935792953 0.13796510975566875 170996.16996158552 159.50901824930276 22635.93773548141 24702.989485274393 5.539951833866038e-05 4.2564940111519185 -1.775087220219973 S(ph)PVPVETLK ddPTM_KYSE-520_SHP099_60min_R1 4 SPVPVETLK 9 0 Q32MZ4-2;Q32MZ4;Q32MZ4-3 Q32MZ4-2;Q32MZ4-3 LRRFIP1 Leucine-rich repeat flightless-interacting protein 1 1 S(1)PVPVETLK;S(1)PVPVETLK;S(1)PVPVETLK;S(1)PVPVETLK 143.24 0.00037476 1275430000.0 1387450.0 1267590.0 1001760.0 1118930.0 1180090.0 1258940.0 1144000.0 1371240.0 1459870.0 1420430.0 True False 1310485.3826869961 1206693.073708621 1066335.05247267 1225272.770781427 1272956.3692063792 1251082.4884799176 1259646.684364069 1366483.4884898204 1194794.4083278785 1407846.0952778165 0.9308442073907178 0.8571200202608077 0.7574230280208615 0.8703172703971157 0.9041871646880414 0.8886500397140612 0.8947332301372739 0.9706199371318114 0.8486683397677105 1.0 20.425058197535524 -8.262181500073927 0.2943884281486053 1.018503902308526 0.8435438712873904 0.3443172295582647 0.05197251883081851 3.070046289696381 0.6806477936855015 0.17854783728673287 0.0811527409729889 5.467874020936506e-09 8.262181500073927 -0.17496003102113566 S(ph)PVREPIDNLTPEER ddPTM_KYSE-520_SHP099_60min_R1 4 SPVREPIDNLTPEER 15 1 Q5QP22;Q5QP23;G3XAC6;Q14498-2;Q14498;H0Y4X3;Q14498-3 Q5QP22;Q14498-3 RBM39 RNA-binding protein 39 1 S(1)PVREPIDNLTPEER;S(1)PVREPIDNLTPEER;S(1)PVREPIDNLTPEER;S(1)PVREPIDNLTPEER 196.43 1.9708999999999997e-11 1863160000.0 924990.0 1204150.0 1015840.0 899540.0 1079280.0 1023820.0 1016590.0 1067630.0 1548280.0 895230.0 True False 873678.9607781495 1146300.826534002 1081322.6718014686 985032.0111434371 1164213.1957368194 1017429.9596132529 1119356.8381622985 1063926.6407167155 1267151.3809626102 887298.9586784011 0.9846500463377778 1.2918992131371085 1.218667802126195 1.110146700285331 1.3120867373392073 1.1466597020790796 1.2615329108799351 1.1990621991728636 1.4280997048052273 1.0 19.759060749802323 -4.250830718030113 24.1105453665656 1.2235194041396291 0.9846498222161566 0.2816953396232771 0.11187560352512427 1135.2817482831167 2580098.5527410535 0.025670725273623702 0.34695975393880996 5.61266707384068e-05 4.250830718030113 -0.23886958192347252 S(ph)PVS(ph)PLAAQGIPLPAQLTK ddPTM_KYSE-520_SHP099_60min_R1 1 SPVSPLAAQGIPLPAQLTK 19 0 K7EIF1;K7EPF0;K7EQS3;K7EM48;K7EN63;Q96SI1-2;Q96SI1 K7EIF1 KCTD15 BTB/POZ domain-containing protein KCTD15 2 S(1)PVS(1)PLAAQGIPLPAQLTK 83.065 0.0030941999999999996 166410000.0 291900.0 348060.0 259100.0 220750.0 243780.0 324090.0 230970.0 298510.0 355850.0 308010.0 True False 275707.7251117762 331338.67515128915 275802.00057465775 241730.0136290926 262964.0990815374 322067.2340949182 254318.7016499732 297474.5384827579 291236.6102484983 305281.27102815383 0.903126890762813 1.0853553971240255 0.9034357058518097 0.7918271986190716 0.8613830065496751 1.0549852370904742 0.8330635573989054 0.9744277383309377 0.9539943582770255 1.0 18.219779557516947 -7.798478827850484 1.8203544125365225 0.994223459513889 0.9229388751331878 0.07214597038973314 0.08693379870826366 1.0256225008644924 6.813998905164296 0.08511710569963074 0.024910395880196435 1.5904542176505743e-08 7.798478827850484 -0.07128458438070118 S(ph)PVSPLAAQGIPLPAQLTK ddPTM_KYSE-520_SHP099_60min_R1 3 SPVSPLAAQGIPLPAQLTK 19 0 K7EIF1;K7EPF0;K7EQS3;K7EM48;K7EN63;Q96SI1-2;Q96SI1 K7EIF1 KCTD15 BTB/POZ domain-containing protein KCTD15 1 S(0.957)PVS(0.043)PLAAQGIPLPAQLTK;S(0.997)PVS(0.003)PLAAQGIPLPAQLTK;S(0.687)PVS(0.313)PLAAQGIPLPAQLTK 330.64 1.3372999999999997e-64 621945000.0 632183.0 718933.0 538414.0 398566.0 435227.0 670983.0 443995.0 566698.0 699775.0 545605.0 True False 597114.548764434 684394.3795395663 573121.0279328588 436445.59280676284 469476.8887971133 666795.1462084935 488878.3475736235 564732.2569063078 572713.4998922095 540771.3641742662 1.1041903997194844 1.2655891655517042 1.0598213328251747 0.8070797045128227 0.8681615187113016 1.2330444812414576 0.9040388969562376 1.0443087306751695 1.059067727757215 1.0 19.044659232089472 -4.973595774396955 8.811096167296538 0.987085453454315 1.1801345633247282 0.3101520757134565 0.11646328236190183 0.3020769877898145 89.57795959512832 0.03123604705224039 0.0645903825714898 1.0626842050681853e-05 4.973595774396955 0.19304910987041324 S(ph)PVSSLQIR ddPTM_KYSE-520_SHP099_60min_R1 4 SPVSSLQIR 9 0 Q5JT35;P55197-1;P55197 Q5JT35 MLLT10 Protein AF-10 1 S(0.997)PVS(0.002)S(0.001)LQIR;S(0.996)PVS(0.003)S(0.001)LQIR;S(0.999)PVS(0.001)SLQIR;S(0.998)PVS(0.002)S(0.001)LQIR 78.116 0.013425 1912070000.0 3351240.0 3198790.0 2745940.0 1864360.0 3044780.0 2886420.0 2999780.0 3507920.0 3665380.0 3488890.0 True False 3165340.036668688 3045115.3269183217 2922947.6860593394 2041548.2138597285 3284386.8635715926 2868404.7821168634 3303027.0374315125 3495751.844274681 2999839.3887105305 3457981.1489153486 0.9153722650169877 0.8806049529429827 0.8452757722453661 0.5903873173224478 0.9497989497721216 0.8295027238701358 0.9551894285102046 1.0109227591860008 0.8675117820267697 1.0 21.721498573515337 -6.767737155242367 7.771351184992174 0.9596711007806695 0.8316372610748279 0.2779132515231394 0.09722431998497319 0.17976049738402572 72.95905448508623 0.04037083079497971 0.02870322276813445 1.7071152608435755e-07 6.767737155242367 -0.1280338397058416 S(ph)PVSTRPLPSASQK ddPTM_KYSE-520_SHP099_60min_R1 10 SPVSTRPLPSASQK 14 1 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.933)PVS(0.035)T(0.033)RPLPSASQK;S(0.787)PVS(0.201)T(0.012)RPLPSASQK;S(1)PVSTRPLPSASQK;S(0.988)PVS(0.009)T(0.003)RPLPSASQK;S(0.997)PVS(0.003)TRPLPSASQK;S(0.771)PVS(0.185)T(0.044)RPLPSASQK;S(0.962)PVS(0.035)T(0.004)RPLPSASQK;S(0.99)PVS(0.002)TRPLPS(0.006)AS(0.002)QK;S(0.976)PVS(0.023)T(0.001)RPLPSASQK;S(0.97)PVS(0.025)T(0.005)RPLPSASQK 227.73 3.3507e-14 140763450000.0 39629630.0 34552940.0 32659090.0 33344290.0 31707850.0 32267520.0 31914190.0 34058550.0 39482370.0 31893060.0 True False 37431295.4241912 32892964.897379667 34764347.19779157 36513321.296273686 34203077.40201216 32066126.43865116 35140387.777679145 33940408.839375295 32313366.877552353 31610512.30082518 1.1841407398896877 1.0405704464498986 1.0997717109723673 1.1551005864375226 1.0820159153548203 1.0144133740538614 1.1116677718874497 1.0737063833821288 1.0222348366277134 1.0 24.913901080911423 -1.0000000000030507 0.04746421300530668 0.8120372176344363 1.558992999259152 0.42089703629323594 0.04403821931764831 592.2560240362038 2.131748816463142 8.2148967238561 33.07710881102935 0.09999999999929755 1.0000000000030507 0.7469557816247158 S(ph)PVSVFSWDNEK ddPTM_KYSE-520_SHP099_60min_R1 3 SPVSVFSWDNEK 12 0 Q9H7T9;Q9H7T9-2 Q9H7T9 AUNIP Aurora kinase A and ninein-interacting protein 1 S(1)PVSVFSWDNEK;S(1)PVSVFSWDNEK;S(0.999)PVS(0.001)VFSWDNEK 206.66 5.263399999999999e-09 520460000.0 602250.0 526870.0 492780.0 524530.0 509600.0 526440.0 533190.0 572240.0 656850.0 576100.0 True False 568841.99194439 501558.37435200653 524545.3872758774 574381.1734943048 549702.6207726289 523154.2926869968 587090.0486329357 570255.0330018206 537582.5978410173 570996.202199018 0.9962272774383933 0.8783917868812563 0.9186495203571418 1.0059281853053499 0.962708015667384 0.916213261440667 1.028185557753164 0.9987019717568295 0.9414819148895941 1.0 19.12312162442622 -5.2462979770290366 24.654775886088032 0.9777277305699659 0.9258197479596472 0.2191491810035634 0.04105929442890015 982.1853356107347 1599290.8008474135 0.01109450167568021 0.019111044765996052 5.6715533669984575e-06 5.2462979770290366 -0.051907982610318704 S(ph)PVTTLLECMHK ddPTM_KYSE-520_SHP099_60min_R1 5 SPVTTLLECMHK 12 0 A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-5;P55265-3;P55265-2;P55265;P55265-4 A0A3B3ITG9 ADAR Double-stranded RNA-specific adenosine deaminase 1 S(0.994)PVT(0.003)T(0.003)LLECMHK;S(1)PVTTLLECMHK;S(0.997)PVT(0.002)TLLECMHK;S(1)PVTTLLECMHK;S(1)PVTTLLECMHK 204.28 1.1045e-08 2741742000.0 688617.0 553699.0 541227.0 605168.0 628539.0 607318.0 601849.0 647185.0 629442.0 590902.0 True False 650418.0422860439 527098.468920857 576115.3584138185 662682.9847696064 678001.443402291 603527.5030888257 662689.7704002016 644940.0662891146 515151.1997415637 585667.0679948002 1.1105593567228176 0.899996769027035 0.9836908883852994 1.1315011906653594 1.1576567651714211 1.0304958842148593 1.131512776822352 1.101205960747038 0.8795973478675045 1.0 19.15972124855587 -3.9008957942613116 20.96725742267195 1.0439291812921618 9.083687173184133 0.04944794257812557 0.09220341912600341 3402.4944827764075 724777.6021892749 0.02307285268438504 8947.911749796851 0.00012563313749248077 3.9008957942613116 8.039757991891971 S(ph)PVVELSK ddPTM_KYSE-520_SHP099_60min_R1 11 SPVVELSK 8 0 P25098 P25098 ADRBK1 Beta-adrenergic receptor kinase 1 1 S(1)PVVELSK;S(1)PVVELSK;S(1)PVVELSK;S(1)PVVELSK;S(1)PVVELSK;S(1)PVVELSK;S(1)PVVELSK;S(1)PVVELSK;S(1)PVVELSK;S(1)PVVELSK;S(1)PVVELSK 152.54 0.0003674 18753580000.0 18491100.0 14997120.0 13789820.0 14627600.0 15629450.0 15562730.0 15587510.0 16975400.0 17900690.0 15903090.0 True False 17465361.82190602 14276635.844063938 14678733.8616921 16017802.706051705 16859398.79559412 15465597.229368435 17163247.63023757 16916516.299488142 14650375.935672877 15762200.995016795 1.108053489955348 0.9057514143219899 0.9312616852388045 1.0162161179847737 1.0696094283358144 0.9811825920921748 1.0888864845502042 1.0732331293603148 0.9294625757091018 1.0 23.90996566746302 -5.5014548611833884 22.92329308071218 1.029829561149228 0.9740357193636038 0.06624337297042227 0.06688573614535005 561.7869953546084 601104.0386295434 0.018566690135751466 0.02716793814745399 3.1517019383679556e-06 5.5014548611833884 -0.0557938417856243 S(ph)PYAGLQLGAAK ddPTM_KYSE-520_SHP099_60min_R1 8 SPYAGLQLGAAK 12 0 Q14134-2;Q14134 Q14134-2 TRIM29 Tripartite motif-containing protein 29 1 S(1)PYAGLQLGAAK;S(1)PYAGLQLGAAK;S(1)PYAGLQLGAAK;S(1)PYAGLQLGAAK;S(0.952)PY(0.048)AGLQLGAAK;S(1)PYAGLQLGAAK;S(1)PYAGLQLGAAK;S(1)PYAGLQLGAAK 210.14 1.3284e-10 11087920000.0 10280320.0 9818950.0 8858760.0 8411630.0 7876970.0 8249640.0 7798920.0 9149450.0 10446600.0 8434710.0 True False 9710050.156290153 9347232.903455567 9429809.844117152 9211068.78615123 8496842.725171458 8198150.936711409 8587310.943724321 9117712.693447694 8549760.777355516 8359985.031505088 1.1614913327831649 1.118092062154415 1.1279697043212837 1.101804459151396 1.016370566831234 0.980641820029127 1.0271921434503222 1.0906374424220935 1.022700488713227 1.0 22.995068928497233 -5.630562756733782 3.5484917630044834 1.0255104232829837 1.1321627668816259 0.7661085717222538 0.02862388560404975 0.12760358684314851 3.113041514542836 0.00959483210547833 0.012725377171225911 2.3411931419485246e-06 5.630562756733782 0.10665234359864217 S(ph)PYKFPS(ph)SPLR ddPTM_KYSE-520_SHP099_60min_R1 3 SPYKFPSSPLR 11 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 S(0.962)PY(0.039)KFPS(0.543)S(0.456)PLR;S(1)PYKFPS(0.568)S(0.432)PLR;S(1)PYKFPS(0.689)S(0.311)PLR 117.0 0.00016658 16471600000.0 15549800.0 14596500.0 12691100.0 13997100.0 13967600.0 14302200.0 13378000.0 13225100.0 14879700.0 13823900.0 True False 14687221.596242214 13895262.230206816 13509188.612477964 15327380.175618447 15066770.655227179 14212934.664668282 14730378.796698017 13179225.21486154 12177921.566712318 13701431.00083145 1.0719480027561312 1.0141467872489818 0.9859691744357345 1.118670026122697 1.0996494201454488 1.0373321344176234 1.0750978343651936 0.9618867703717794 0.8888065462631838 1.0 23.707823242798028 -7.348059450198367 4.797607710491951 0.9395422323478508 1.056244604782237 0.5490865012841132 0.04454714271206145 0.17233806770637008 6.82278892246683 0.026510415184018414 0.012224337749546886 4.486839657666319e-08 7.348059450198367 0.11670237243438608 S(ph)PYKFPS(ph)SPLRIPGGNIY(ph)ISPLKS(ph)PYK ddPTM_KYSE-520_SHP099_60min_R1 1 SPYKFPSSPLRIPGGNIYISPLKSPYK 27 3 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 4 S(0.671)PY(0.336)KFPS(0.488)S(0.504)PLRIPGGNIY(0.511)IS(0.489)PLKS(0.967)PY(0.033)K 93.98299999999999 0.0025976999999999997 374340000.0 228940.0 324640.0 273970.0 197000.0 213200.0 219690.0 140270.0 182720.0 387680.0 162360.0 True False 216240.24181942487 309043.80710542545 291630.54456749867 215722.82076979015 229977.62705793642 218318.83322013228 154449.86050327614 182086.1869671684 317287.08461750107 160921.61671416863 1.343761305875481 1.9204617342016497 1.8122521418952506 1.3405459451290516 1.4291282411512563 1.356678100046145 0.9597831767848336 1.1315209894429075 1.9716871548778379 1.0 17.29599861175732 -5.299905364579923 7.894047119488383 1.3095230439312902 1.714822358235704 0.25144680457703106 0.2991964462679178 0.37099593306750106 69.40520191041252 0.08410246730002235 0.1262106203815054 5.012964572863195e-06 5.299905364579923 0.4052993143044139 S(ph)PYKFPS(ph)SPLRIPGGNIYIS(ph)PLKS(ph)PYK ddPTM_KYSE-520_SHP099_60min_R1 1 SPYKFPSSPLRIPGGNIYISPLKSPYK 27 3 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 4 S(0.669)PY(0.312)KFPS(0.506)S(0.514)PLRIPGGNIY(0.296)IS(0.729)PLKS(0.855)PY(0.119)K 45.809 0.047797000000000006 259130000.0 137330.0 228640.0 207780.0 149040.0 160000.0 146100.0 101410.0 129450.0 245680.0 128510.0 True False 129712.03113943219 217655.7912043634 221173.8312597543 163204.71678948984 172591.08972453038 145188.1357069567 111661.51246622403 129000.96816385705 201070.70508880468 127371.50137926717 1.0183756156975472 1.7088264552700971 1.736446762931506 1.2813283585589845 1.3550212398817167 1.1398792833150166 0.876660094739212 1.0127930248677677 1.5786161182954688 1.0 16.958682993647514 -5.940464279654109 1.8206304085310243 1.1092808897974349 1.4925489320374885 0.2526099033377911 0.2574394970612256 0.45525154221750797 3.076363427603618 0.0969346758433527 0.11156791524871695 1.146926851285683e-06 5.940464279654109 0.3832680422400536 S(ph)PYKFPSS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 8 SPYKFPSSPLR 11 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 2 S(0.998)PY(0.004)KFPS(0.498)S(0.501)PLR;S(1)PYKFPS(0.017)S(0.983)PLR;S(0.999)PY(0.001)KFPS(0.022)S(0.978)PLR;S(0.999)PY(0.001)KFPS(0.014)S(0.986)PLR;S(0.991)PY(0.009)KFPS(0.074)S(0.926)PLR;S(1)PYKFPSS(1)PLR;S(0.887)PY(0.113)KFPS(0.021)S(0.979)PLR;S(1)PYKFPS(0.024)S(0.976)PLR 184.59 3.5301999999999997e-06 55735990000.0 16542520.0 14387160.0 13168940.0 14633230.0 14528350.0 14785310.0 14572310.0 14535770.0 16390060.0 14456760.0 True False 15624873.438903939 13695979.238032555 14017830.943448989 16023967.779558979 15671648.489996115 14693029.395957714 16045421.306840355 14485348.806544239 13414038.263789544 14328684.3535891 1.0904611374867899 0.9558434605757741 0.9783055162309966 1.1183139626873864 1.0937255719552943 1.0254276689595268 1.1198112060317136 1.0109336244060605 0.9361667779658742 1.0 23.772402812981888 -7.522991587157684 23.17792966940168 0.9699055686945148 1.0517152332616002 0.2898697533155117 0.054455455286763134 2.2769957298167127 465752.4886192934 0.03758345294134299 0.014585286108223424 2.999220617183206e-08 7.522991587157684 0.08180966456708538 S(ph)PYNGVR ddPTM_KYSE-520_SHP099_60min_R1 2 SPYNGVR 7 0 Q9UK58;Q9UK58-6 Q9UK58 CCNL1 Cyclin-L1 1 S(0.992)PY(0.008)NGVR;S(0.99)PY(0.01)NGVR 75.378 0.027652999999999997 1078890000.0 1464960.0 1395490.0 1281570.0 1220840.0 1216490.0 1270030.0 1167340.0 1219470.0 1485490.0 1365170.0 True False 1383695.7484746426 1328448.565726806 1364182.0527845013 1336868.2665410715 1312220.8421187103 1262103.2716762929 1285346.1193405173 1215239.9431964364 1215762.4621555193 1353075.6558861868 1.022629992975819 0.9817991772653307 1.008208260085088 0.9880218158721507 0.969805964958612 0.932766224996996 0.9499440136617413 0.8981315552532975 0.8985177265341197 1.0 20.367811077759317 -6.028621207902473 1.3674845647298774 0.9272267031240384 1.0029583759925431 0.5208966000667358 0.028877353553615186 0.30978758845152354 1.1920487350741287 0.011936444978976187 0.013113679654535923 9.362218918478797e-07 6.028621207902473 0.07573167286850468 S(ph)PYQEFTDHLVK ddPTM_KYSE-520_SHP099_60min_R1 12 SPYQEFTDHLVK 12 0 P15880;H0YEN5;E9PQD7 P15880 RPS2 40S ribosomal protein S2 1 S(0.593)PY(0.407)QEFTDHLVK;S(0.624)PY(0.376)QEFTDHLVK;S(1)PYQEFTDHLVK;S(0.999)PY(0.001)QEFTDHLVK;S(1)PYQEFTDHLVK;S(1)PYQEFTDHLVK;S(0.999)PY(0.001)QEFTDHLVK;S(1)PYQEFTDHLVK;S(1)PYQEFTDHLVK;S(1)PYQEFTDHLVK;S(1)PYQEFTDHLVK;S(1)PYQEFTDHLVK 204.07 1.1724000000000001e-08 14849777000.0 6906716.0 6087266.0 5848162.0 6127915.0 5643012.0 5857565.0 6181732.0 6267590.0 6619633.0 6053872.0 True False 6523586.695282995 5794824.60418746 6225143.879910042 6710310.199175171 6087084.940053752 5821005.764081584 6806641.798450414 6245849.193156502 5417674.514568207 6000239.40392115 1.087221068382678 0.9657655660206739 1.0374825837518944 1.1183404106826123 1.0144736785128687 0.9701289185690763 1.1343950366384183 1.0409333316058766 0.9029097257399035 1.0 22.5165886333719 -7.721244935637712 13.80777121545449 0.9514808353163562 1.04490614851032 0.304168590868233 0.05723331422130237 1.7505188897272266 600.9454764715001 0.03843223771336879 0.014492146261982253 1.900006402297918e-08 7.721244935637712 0.09342531319396374 S(ph)PYSGPK ddPTM_KYSE-520_SHP099_60min_R1 10 SPYSGPK 7 0 Q5QP22;Q5QP23;G3XAC6;Q14498-2;Q14498 Q5QP22 RBM39 RNA-binding protein 39 1 S(1)PYSGPK;S(1)PYSGPK;S(0.991)PY(0.001)S(0.009)GPK;S(1)PYSGPK;S(1)PYSGPK;S(1)PYSGPK;S(1)PYSGPK;S(1)PYSGPK;S(0.999)PYS(0.001)GPK;S(0.99)PY(0.007)S(0.002)GPK 126.24 0.002239 29400990000.0 41407870.0 34129940.0 31454680.0 34198030.0 35822050.0 34873320.0 34959070.0 37885660.0 39681840.0 35117110.0 True False 39110892.90655761 32490286.452315617 33482299.002067406 37448200.48918739 38641041.53541629 34655662.67427874 38493073.96324419 37754243.48803954 32476618.153781835 34805999.72609819 1.1236825034286124 0.9334679856344937 0.961969179611346 1.0759122215675947 1.110183354579599 0.9956807144457133 1.1059321457840894 1.0847050446802913 0.933075286138966 1.0 25.052832678016024 -3.994490547050322 14.650388259364695 1.029242950192463 1.2373480384574644 0.171402364198601 0.0652802003655923 1430408.56502617 36017213.15881839 0.016796445666394353 5434142.528453211 0.00010127667926804693 3.994490547050322 0.20810508826500151 S(ph)QDDAMVDYFFQR ddPTM_KYSE-520_SHP099_60min_R1 9 SQDDAMVDYFFQR 13 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4;E9PM68;E9PL65;E9PMX1 Q5T1Z4 PUM1 Pumilio homolog 1 1 S(0.967)QDDAMVDY(0.033)FFQR;S(1)QDDAMVDYFFQR;S(1)QDDAMVDYFFQR;S(1)QDDAMVDYFFQR;S(1)QDDAMVDYFFQR;S(1)QDDAMVDYFFQR;S(1)QDDAMVDYFFQR;S(1)QDDAMVDYFFQR;S(1)QDDAMVDYFFQR 268.93 2.7639e-22 1400869000.0 1139553.0 1180880.0 1155743.0 1134279.0 1312755.0 1200527.0 1137232.0 1224257.0 1497000.0 1258424.0 True False 1076339.7234474139 1124148.7522629832 1230244.0430341838 1242080.5351265848 1416061.349945784 1193034.0656801194 1252194.508874754 1220010.3382107306 1225182.5362990077 1247275.3423990572 0.8629527794377309 0.9012835530771838 0.9863451967773894 0.995835075788093 1.1353237747986562 0.9565121871048873 1.0039439298673498 0.9781403485970595 0.9822871459500231 1.0 20.250348551945326 -4.718513881624728 2.3400640751350363 1.009110271958815 0.8647250318646706 0.5488440782059387 0.04547923399225935 0.23942332279925557 2.5098411388402435 0.012901623231458454 0.04776539030525017 1.911992209431244e-05 4.718513881624728 -0.14438524009414433 S(ph)QDIPFVSTDIINTLK ddPTM_KYSE-520_SHP099_60min_R1 5 SQDIPFVSTDIINTLK 16 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 S(1)QDIPFVSTDIINTLK;S(1)QDIPFVSTDIINTLK;S(1)QDIPFVSTDIINTLK;S(1)QDIPFVSTDIINTLK;S(1)QDIPFVSTDIINTLK 321.67 2.185e-47 1947107000.0 2373253.0 2247735.0 1952357.0 1891698.0 2050624.0 2016503.0 1751729.0 1778147.0 2590212.0 2066396.0 True False 2241603.925127438 2139750.436680981 2078209.0561016477 2071484.4091602555 2211996.4423454693 2003917.2567931926 1928810.8625475427 1771979.0230796316 2119894.7947308817 2048089.3390717616 1.094485422273318 1.0447544430121207 1.0147062515561636 1.0114228757711794 1.0800292741858584 0.978432541278405 0.9417610969166617 0.865186390688763 1.0350597282497764 1.0 20.96584721738896 -6.445215145972279 4.731851499951178 0.9502941798455298 1.0445112676279409 0.43789603504065333 0.047718350891900047 0.19974456320956746 8.117661216147118 0.017185900634488195 0.014808508351469983 3.5874417165757596e-07 6.445215145972279 0.09421708778241111 S(ph)QDKLDKDDLEK ddPTM_KYSE-520_SHP099_60min_R1 7 SQDKLDKDDLEK 12 2 A0A096LNH6;Q14185 A0A096LNH6 DOCK1 Dedicator of cytokinesis protein 1 1 S(1)QDKLDKDDLEK;S(1)QDKLDKDDLEK;S(1)QDKLDKDDLEK;S(1)QDKLDKDDLEK;S(1)QDKLDKDDLEK;S(1)QDKLDKDDLEK;S(1)QDKLDKDDLEK 197.14 3.1731e-08 13071090000.0 10529980.0 8355800.0 8085390.0 9164820.0 9152670.0 9123800.0 8627000.0 8462270.0 11730550.0 8695110.0 True False 9945861.018405275 7954374.825688504 8606587.176481405 10035841.7372964 9872933.057431344 9066854.979898235 9499101.35140632 8432916.36047867 9600577.82310109 8618078.090093214 1.1540694937353138 0.9229870909190692 0.9986666500939441 1.1645104201170973 1.1456072867082314 1.0520738945636738 1.1022296679262948 0.9785147305839113 1.114004505730494 1.0 23.03893474037398 -5.161393114910971 22.37952280893821 1.0812756978543938 1.0150140361281454 0.09084069760584323 0.07659521033874248 36.56075660040969 8166.874726855481 0.020532586009889837 0.035563491209139195 6.896152948954386e-06 5.161393114910971 -0.06626166172624837 S(ph)QDVELWEGEVVK ddPTM_KYSE-520_SHP099_60min_R1 6 SQDVELWEGEVVK 13 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 S(1)QDVELWEGEVVK;S(1)QDVELWEGEVVK;S(1)QDVELWEGEVVK;S(1)QDVELWEGEVVK;S(1)QDVELWEGEVVK;S(1)QDVELWEGEVVK 235.95 9.3399e-16 683413000.0 993910.0 913987.0 922184.0 807726.0 885583.0 852765.0 817659.0 882046.0 1121627.0 889107.0 True False 938775.830989537 870077.6925975432 981629.4561865701 884492.0361883227 955273.3438219917 847442.577317884 900315.9513028334 878986.3882970836 917967.8107157305 881230.2036947783 1.0653014695291698 0.9873443839640592 1.113930789106913 1.0037014533544906 1.0840224720132936 0.9616585697639151 1.021658072462829 0.9974537693008173 1.041689001201866 1.0 19.749159417925352 -6.254919574074617 24.998356514546348 1.0054056298814023 1.048215460845269 0.2602599710957223 0.03894386747339943 773.1510763906292 2964431.047460339 0.01217845506776083 0.011900503626397625 5.560072133433432e-07 6.254919574074617 0.0428098309638667 S(ph)QEADVQDWEFR ddPTM_KYSE-520_SHP099_60min_R1 10 SQEADVQDWEFR 12 0 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(1)QEADVQDWEFR;S(1)QEADVQDWEFR;S(1)QEADVQDWEFR;S(1)QEADVQDWEFR;S(1)QEADVQDWEFR;S(1)QEADVQDWEFR;S(1)QEADVQDWEFR;S(1)QEADVQDWEFR;S(1)QEADVQDWEFR;S(1)QEADVQDWEFR 252.82 6.1884e-16 9920630000.0 4616725.0 4291170.0 4246996.0 4375290.0 4356103.0 4942060.0 4728440.0 5049280.0 6114040.0 4966590.0 True False 4360626.061036879 4085015.7520225164 4520764.157593862 4791116.246121093 4698903.523264346 4911214.770375925 5206436.860327309 5031765.226190815 5003884.45840587 4922589.876548551 0.8858398059548097 0.8298509228818194 0.9183710751795502 0.9732917765394584 0.9545592139719261 0.9976892029484687 1.0576621231703698 1.0221784370382714 1.0165145957506252 1.0 22.230986116388976 -5.353062688075515 0.8775767318279128 1.0238415444097713 0.8445336201024322 0.8431884237483362 0.026172522961917587 0.26754056637835516 0.3895831585293456 0.011870155980768534 0.03379419985350783 4.435446160278156e-06 5.353062688075515 -0.1793079243073391 S(ph)QEDLNEPIKR ddPTM_KYSE-520_SHP099_60min_R1 4 SQEDLNEPIKR 11 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(1)QEDLNEPIKR;S(1)QEDLNEPIKR;S(1)QEDLNEPIKR;S(1)QEDLNEPIKR 135.72 7.382e-05 4618810000.0 5454300.0 5569810.0 5005660.0 4769680.0 5930330.0 4763450.0 4816950.0 5359050.0 6154800.0 4852830.0 True False 5151739.106122513 5302227.9671447445 5328332.852939179 5222988.953143412 6397013.232037953 4733719.541637939 5303894.314901662 5340460.706361672 5037243.46988186 4809837.7016446125 1.0710837715711272 1.1023714927702801 1.1077988870845432 1.0858971294099033 1.329985257059847 0.9841744847272818 1.1027179385051014 1.1103203554114986 1.0472793017858983 1.0 22.19755678328148 -7.984074607342477 0.8357616302969967 0.999534030534235 1.119745724563821 0.1679809777237008 0.08156632579856714 1.2086717121320227 1.922076609749578 0.07819346097559715 0.028468934989267555 1.0373501943747992e-08 7.984074607342477 0.12021169402958598 S(ph)QEELREDK ddPTM_KYSE-520_SHP099_60min_R1 8 SQEELREDK 9 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(1)QEELREDK;S(1)QEELREDK;S(1)QEELREDK;S(1)QEELREDK;S(1)QEELREDK;S(1)QEELREDK;S(1)QEELREDK;S(1)QEELREDK 131.49 0.00059922 8272363000.0 10047800.0 8674270.0 7749470.0 7917470.0 8379760.0 7852460.0 7487240.0 8091770.0 10511880.0 7805550.0 True False 9490428.50420728 8257545.04885529 8249013.235790397 8669943.96832585 9039199.437687678 7803449.884417857 8244123.287620659 8063701.53850332 8603187.574930405 7736398.899626002 1.2267242973557209 1.067362884979274 1.0662600704559295 1.1206692003362155 1.1683988319326009 1.0086669503035963 1.065628000130552 1.0423068462632066 1.112040328652948 1.0 22.883230753445474 -6.263872752704713 24.997169680861656 1.0496163272255186 1.1223632225238307 0.3865309920121023 0.05247015820058471 277.4330219492264 2849959.663021839 0.01804061978104912 0.016685247421427258 5.446622142555217e-07 6.263872752704713 0.07274689529831213 S(ph)QEEPKDTFEHDPSESIDEFNK ddPTM_KYSE-520_SHP099_60min_R1 6 SQEEPKDTFEHDPSESIDEFNK 22 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.947)QEEPKDT(0.053)FEHDPSESIDEFNK;S(0.853)QEEPKDT(0.143)FEHDPS(0.003)ES(0.001)IDEFNK;S(1)QEEPKDTFEHDPSESIDEFNK;S(1)QEEPKDTFEHDPSESIDEFNK;S(0.844)QEEPKDT(0.156)FEHDPSESIDEFNK;S(0.989)QEEPKDT(0.011)FEHDPSESIDEFNK 268.28 2.7108999999999997e-36 11957230000.0 8617650.0 8982050.0 8001100.0 9568140.0 8765870.0 8217130.0 7988900.0 8043610.0 10836470.0 8286670.0 True False 8139611.7756406255 8550538.835668087 8516863.708212635 10477493.148833811 9455694.09802231 8165843.843680385 8796495.976150442 8015708.594302684 8868840.213178428 8213256.5507317 0.9910334257019509 1.0410655971663687 1.036965502733978 1.2756807344463623 1.1512722194438119 0.99422729501283 1.0710119575367194 0.9759476700613453 1.079820185622757 1.0 22.969522932380777 -6.269669167428078 24.59154556169237 1.0256238098564936 1.102320237851142 0.1843430467128353 0.07871827017602373 965.1552278474157 2883984.0737105263 0.029846791743729558 0.026754541034150547 5.374410470191342e-07 6.269669167428078 0.07669642799464849 S(ph)QEMVHLVNK ddPTM_KYSE-520_SHP099_60min_R1 18 SQEMVHLVNK 10 0 P16070;P16070-14;H0YD13;P16070-8;P16070-7;P16070-5;P16070-3;P16070-6;P16070-17;P16070-4;P16070-16;P16070-10;P16070-11;P16070-13;P16070-12;P16070-18;H0Y2P0;H0YE40 P16070 CD44 CD44 antigen 1 S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK;S(1)QEMVHLVNK 160.46 5.0635e-05 112752210000.0 37510870.0 41664690.0 33819720.0 64241270.0 59212070.0 54729110.0 55213380.0 68816340.0 76093160.0 45744600.0 True False 35430067.265034564 39663055.752425276 35999793.264665246 70346740.98595797 63871723.03840733 54387525.3237575 60794887.281060636 68577632.17839447 62276560.296463765 45339338.43276025 0.7814420873736068 0.8748044661314789 0.7940079081227472 1.551560817109948 1.4087484565556956 1.199565922304226 1.340886068975653 1.5125415268265852 1.3735657036289133 1.0 25.434260004413762 -5.250488824932658 24.995836911226284 1.359264477125818 0.822556730780536 0.7201911119124467 0.14942309338002258 361.2892300965454 824680.5751563209 0.03952930426344583 0.06766167821010349 5.617087318023366e-06 5.250488824932658 -0.536707746345282 S(ph)QERDNLGMLVWSPNQNLSEAK ddPTM_KYSE-520_SHP099_60min_R1 2 SQERDNLGMLVWSPNQNLSEAK 22 1 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 S(1)QERDNLGMLVWSPNQNLSEAK;S(1)QERDNLGMLVWSPNQNLSEAK 133.95 1.6203e-06 756900000.0 350410.0 373060.0 310260.0 270170.0 288740.0 300201.0 249166.0 252220.0 450790.0 293830.0 True False 330972.0587749829 355137.6376255235 330259.85603355226 295846.8755704278 311462.1952941303 298327.3342050933 274354.1309058196 251345.1076885906 368937.89949113544 291226.89479628106 1.1364749090447308 1.2194534363797316 1.1340293837372937 1.015863853430771 1.0694829387649936 1.0243811252864512 0.9420631672694093 0.8630559614503029 1.2668400689751362 1.0 18.151784068975928 -5.162826619186881 3.2385986704624847 1.0176873441974101 1.178634967051026 0.28963669299118266 0.0992346092626743 0.3003347539535138 5.99104492857947 0.027581953085413426 0.05191137848152768 6.8734278903686206e-06 5.162826619186881 0.16094762285361597 S(ph)QESGYYDR ddPTM_KYSE-520_SHP099_60min_R1 3 SQESGYYDR 9 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991 D6REM6 MATR3 Matrin-3 1 S(0.999)QES(0.001)GYYDR;S(0.777)QES(0.223)GYYDR;S(0.954)QES(0.046)GY(0.001)YDR 122.55 0.0010927 943500000.0 2112941.0 1779086.0 1878072.0 1516732.0 1811851.0 1981447.0 1759141.0 1859794.0 2293320.0 1784400.0 True False 1995731.9506865419 1693616.0380974708 1999135.5261414447 1660881.7532578947 1954433.3656779993 1969080.0542925536 1936972.1398416911 1853342.808693182 1876910.8978926146 1768591.6042421919 1.128430071645441 0.9576071909620725 1.1303545269276773 0.9390985173027275 1.1050789571713686 1.1133605121552452 1.095206001880602 1.047920166672568 1.0612460747809755 1.0 20.754169514720562 -3.9209201875102955 20.09652924862974 1.0549020909270963 3.983989449191053 0.1194218396484843 0.06263591499027879 886.028791727776 233947.1871848596 0.01443016485112088 4565.4848025445 0.00011997197614493716 3.9209201875102955 2.9290873582639567 S(ph)QFFEQGSSDSVVPDLPVPTISAPSR ddPTM_KYSE-520_SHP099_60min_R1 1 SQFFEQGSSDSVVPDLPVPTISAPSR 26 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.999)QFFEQGS(0.001)SDSVVPDLPVPTISAPSR 129.57 5.8615e-05 196770000.0 63055.0 69205.0 68566.0 50095.0 47963.0 66578.0 63497.0 71522.0 101610.0 80653.0 True False 59557.213452973825 65880.28792117721 72985.87406947886 54856.013738389076 51737.41522786029 66162.46200614485 69915.8964310011 71273.9068753602 83160.18537965418 79938.47716708442 0.7450381288661474 0.8241373898514065 0.9130255748671132 0.6862279052893525 0.6472154219265484 0.8276672805244281 0.874621320154317 0.8916095152323974 1.0403023465888133 1.0 16.286602469140163 -7.275410431536444 1.3546152497088926 1.01531460859634 0.7727212244561723 0.6249205584096995 0.07372196419903528 0.3330847249799619 1.0825794666169954 0.06747868730890688 0.025653441976821394 5.303829670076942e-08 7.275410431536444 -0.24259338414016773 S(ph)QGLSGDK ddPTM_KYSE-520_SHP099_60min_R1 2 SQGLSGDK 8 0 Q9Y446;Q9Y446-2;E9PK71;E9PQ15 Q9Y446 PKP3 Plakophilin-3 1 S(1)QGLSGDK;S(1)QGLSGDK 116.74 0.00099777 1157980000.0 1177850.0 914470.0 880100.0 1138800.0 1245050.0 1177600.0 1486060.0 944610.0 1346340.0 1424330.0 True False 1112512.3125142364 870537.4885525457 936832.6542097882 1247031.2096072964 1343028.3516345394 1170250.1615914607 1636285.4473479625 941333.3683836309 1101878.5944694772 1411711.5443119705 0.7880592299444887 0.6166539418481711 0.6636147858848706 0.8833470368871038 0.951347573125567 0.8289584131450937 1.1590791716203208 0.6668029118104372 0.780526729351429 1.0 20.429013901485554 -5.267020559745497 20.506704412227347 0.8923490142631672 0.682163720648845 0.34454617500332585 0.13020701624426712 42.68835813083917 156852.95147722246 0.0367025608238974 0.056553701995204035 5.407287239371601e-06 5.267020559745497 -0.21018529361432214 S(ph)QLDLFDDVGTFASGPPK ddPTM_KYSE-520_SHP099_60min_R1 4 SQLDLFDDVGTFASGPPK 18 0 Q8N6H7;H0YDN9;A0A0D9SF70;G5E9L0;Q8N6H7-3;Q8N6H7-2;E9PQP3 Q8N6H7 ARFGAP2 ADP-ribosylation factor GTPase-activating protein 2 1 S(1)QLDLFDDVGTFASGPPK;S(1)QLDLFDDVGTFASGPPK;S(1)QLDLFDDVGTFASGPPK;S(1)QLDLFDDVGTFASGPPK 250.27 5.3228e-24 458922000.0 714202.0 593861.0 513070.0 479394.0 544878.0 560491.0 521467.0 676889.0 695127.0 651009.0 True False 674583.7913336112 565331.0261564663 546143.313141025 524955.4616249377 587756.7986682667 556992.7677654205 574181.9733874813 674541.0300460801 568909.459525665 645241.5667373382 1.0454747897669425 0.876154072055619 0.8464168170420217 0.8135797330593149 0.9109096948608829 0.8632313795000104 0.8898713334462169 1.0454085180173598 0.8816999537124581 1.0 19.29947985495485 -7.137323277744231 10.122473405095644 0.9725746447756436 0.8861680261302896 0.23102859481357874 0.06912539028279441 0.5639565897998908 43.619170504975855 0.032186898563537035 0.018572787359337505 7.28914722718001e-08 7.137323277744231 -0.08640661864535404 S(ph)QLDSLKR ddPTM_KYSE-520_SHP099_60min_R1 4 SQLDSLKR 8 1 A0A0A0MS66;Q14693-6;Q14693;Q14693-2;Q14693-4;Q14693-3;Q14693-5;Q14693-7 A0A0A0MS66 LPIN1 Phosphatidate phosphatase LPIN1 1 S(1)QLDSLKR;S(1)QLDSLKR;S(1)QLDSLKR;S(1)QLDSLKR 100.04 0.001768 2965500000.0 2367430.0 2080740.0 1876760.0 2035010.0 2211960.0 2523560.0 2270520.0 2675730.0 3107740.0 2730470.0 True False 2236103.9385452983 1980778.1271455863 1997738.9525221698 2228416.738551932 2386028.667669201 2507809.5259729503 2500046.3197397813 2666448.517150078 2543452.7557500894 2706280.1600735164 0.8262647642824068 0.7319190955794386 0.7381863053187742 0.8234242601443735 0.8816635848981667 0.926662938660728 0.923794349389114 0.9852817740339358 0.9398335003427717 1.0 21.367879767332973 -5.918702163184218 1.2053483481809688 0.9621784848970268 0.7594866402992756 0.8734071688687026 0.03206872022036284 0.14933808750570346 0.4574575580267646 0.014010139363778382 0.017374793993685113 1.2058626309647463e-06 5.918702163184218 -0.20269184459775125 S(ph)QLQDTLIHLIK ddPTM_KYSE-520_SHP099_60min_R1 2 SQLQDTLIHLIK 12 0 Q9NPI6-2;Q9NPI6 Q9NPI6-2 DCP1A mRNA-decapping enzyme 1A 1 S(0.962)QLQDT(0.038)LIHLIK;S(0.992)QLQDT(0.008)LIHLIK 124.43 6.7665e-05 26951000.0 78109.0 84979.0 78845.0 67490.0 80256.0 70001.0 61930.0 65605.0 92536.0 62261.0 True False 73776.13806356875 80896.48128392041 83927.47485646045 73904.22930839153 86571.69060582439 69564.09779344752 68190.48877855492 65377.431567322084 75733.79504272885 61709.41597832499 1.1955410190477596 1.3109260556336289 1.3600432531388629 1.1976167354160325 1.4028927228258343 1.1272849805916398 1.10502567067733 1.0594401280719534 1.2272648159452655 1.0 15.91320302044424 -6.38813639437451 6.789914388915794 1.104915020791167 1.292362690644653 0.5864923244576501 0.07977343078630328 0.17830629734916556 9.090318095998448 0.02681666872950513 0.023572757078514438 4.091321476503045e-07 6.38813639437451 0.18744766985348593 S(ph)QMEEVQDELIHR ddPTM_KYSE-520_SHP099_60min_R1 2 SQMEEVQDELIHR 13 0 A0A2R8Y4W2;A0A2R8YE63;Q12929-2;Q12929 A0A2R8Y4W2 EPS8 Epidermal growth factor receptor kinase substrate 8 1 S(1)QMEEVQDELIHR;S(1)QMEEVQDELIHR 189.34 1.7008000000000002e-08 314536000.0 167102.0 159105.0 134065.0 132120.0 116022.0 134925.0 131106.0 152504.0 148263.0 168935.0 True False 157832.51895042157 151461.3569785263 142707.0444115843 144676.6450766735 125152.27132512159 134082.8830271124 144359.4739512551 151974.99921870115 121342.17660607857 167438.3673294413 0.9426305420183663 0.9045797531011538 0.8522959623155116 0.864059100576493 0.747452769166578 0.8007894795300964 0.862164844615466 0.9076474026988367 0.7246975621025572 1.0 17.35327062367292 -4.635508650006991 1.7231357991941694 0.8352872542402611 0.948269290123765 0.1570455606534782 0.07415901196784205 0.812641289580002 3.9496577165239426 0.020349588213286363 0.12017895197311801 2.3146820831600832e-05 4.635508650006991 0.11298203588350397 S(ph)QS(ph)KS(ph)PTGTPAR ddPTM_KYSE-520_SHP099_60min_R1 2 SQSKSPTGTPAR 12 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 3 S(0.994)QS(0.989)KS(0.631)PT(0.375)GT(0.01)PAR;S(1)QS(0.998)KS(0.948)PT(0.054)GT(0.001)PAR 96.24700000000001 0.0019072 319620000.0 1219350.0 1106320.0 968260.0 1111050.0 1067150.0 1121470.0 1079390.0 1114700.0 1289970.0 985960.0 True False 1151710.224786039 1053170.7265798256 1030675.5888707759 1216643.8579506373 1151128.633747079 1114470.489741827 1188505.2750312353 1110833.365872935 1055743.9654974171 977225.1614652735 1.1785515459499003 1.077715523616561 1.0546961227700662 1.2449984977120054 1.177956400571032 1.1404439157816655 1.216204127664052 1.136722026484998 1.0803487334632387 1.0 19.89833148484288 -7.984898112815105 2.3970109496219423 1.0010900024598461 1.1537287461310688 0.44854265054077036 0.05417985498711237 0.2770972837554341 3.6760810722890014 0.05501873557843391 0.015082127855747798 1.0353850435710886e-08 7.984898112815105 0.15263874367122265 S(ph)QS(ph)KSPT(ph)GTPAR ddPTM_KYSE-520_SHP099_60min_R1 1 SQSKSPTGTPAR 12 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 3 S(0.999)QS(0.999)KS(0.48)PT(0.514)GT(0.008)PAR 125.98 0.0093911 0.0 508900.0 457620.0 360760.0 455560.0 433390.0 467300.0 467530.0 472350.0 501080.0 434530.0 True False 480670.30253300036 435635.24829837657 384015.16683640855 498856.2854308918 467495.327348214 464383.40736386576 514792.49505308835 470711.5280973189 410096.5031988692 430680.40225922497 1.1160719178572853 1.0115046935341379 0.8916476459620079 1.1582980855735154 1.0854808458798417 1.0782552559342022 1.1953004881407086 1.0929485661016898 0.9522060930741715 1.0 18.716258150914886 -3.675771852703576 6.080483701462768 1.0595098533151106 6.416147229561629 0.040192831400321594 0.08711121046166755 16453.035751382744 3892.2821506284986 0.022764652231012518 1205501.3536511103 0.00021097361635409001 3.675771852703576 5.3566373762465185 S(ph)QS(ph)LPTTLLSPVR ddPTM_KYSE-520_SHP099_60min_R1 4 SQSLPTTLLSPVR 13 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7 P28290-3 SSFA2 Sperm-specific antigen 2 2 S(1)QS(0.894)LPT(0.047)T(0.059)LLSPVR;S(1)QS(0.797)LPT(0.089)T(0.114)LLSPVR;S(0.999)QS(0.993)LPT(0.004)T(0.004)LLSPVR;S(1)QS(0.967)LPT(0.015)T(0.018)LLSPVR 104.41 0.00088528 717720000.0 1343870.0 1096780.0 1238440.0 1092230.0 984900.0 1083300.0 1160230.0 1199850.0 1303200.0 1092690.0 True False 1269322.8521615718 1044089.0424996569 1318271.8239740604 1196035.2108090755 1062406.0266855622 1076538.7228702689 1277517.3711536035 1195688.0003970962 1066571.730998576 1083009.6166999573 1.172032854176614 0.9640625774691683 1.2172300260739803 1.1043625027573798 0.9809756167473597 0.9940250818368483 1.1795992865200327 1.104041905039109 0.9848220316348905 1.0 20.04661462289252 -6.988109811307574 0.011233452152848948 1.5446813457535618e-06 2.1278307304586614 0.1162962952965364 0.08590810233572048 2798.889816312633 23.869312292136893 2232.813990826076 2284.201420862122 1.0277563971883419e-07 6.988109811307574 2.1278291857773155 S(ph)QS(ph)PKKDIAR ddPTM_KYSE-520_SHP099_60min_R1 4 SQSPKKDIAR 10 2 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 2 S(1)QS(1)PKKDIAR;S(1)QS(1)PKKDIAR;S(1)QS(1)PKKDIAR;S(1)QS(1)PKKDIAR 99.991 0.011036 6715990000.0 13753600.0 14940200.0 15175300.0 10795900.0 12786000.0 11187300.0 9855800.0 9850300.0 18402200.0 10614800.0 True False 12990660.390878128 14222450.366302602 16153524.119338483 11821939.090094307 13792185.457611537 11117475.910981782 10852120.447338626 9816131.608377295 15060824.361711161 10520761.130189449 1.2347643131637382 1.3518461440485625 1.5353950079700749 1.1236771697221708 1.3109493968107209 1.056717833758249 1.031495755207134 0.9330248531363181 1.4315337241612631 1.0 23.326735745175238 -5.8686211959190695 1.4829240416781841 1.0863813986468769 1.3550623764655592 0.3178507972193777 0.1585877526708357 0.45591085507117995 2.081518790387151 0.060618965649057936 0.07574159017746128 1.353252394059949e-06 5.8686211959190695 0.2686809778186823 S(ph)QS(ph)PSPSPAR ddPTM_KYSE-520_SHP099_60min_R1 1 SQSPSPSPAR 10 0 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-4;Q8N2M8-3 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 2 S(0.998)QS(0.974)PS(0.028)PSPAR 70.089 0.057474000000000004 0.0 175300.0 148380.0 158210.0 146850.0 151270.0 170620.0 154500.0 187240.0 190730.0 165870.0 True False 165575.75954811383 141251.6020770792 168408.46974495007 160806.57984793742 163174.08839143554 169555.09729172455 170118.36777469315 186590.50814214436 156098.23991203075 164400.52084490747 1.0071486312644657 0.8591919377818362 1.0243791739797687 0.9781391142893001 0.9925399722143889 1.0313537719973516 1.0347799806253644 1.1349751642099146 0.9494996677005121 1.0 17.326855344132653 -5.624814703344004 0.9755296099342659 1.0395247566239563 0.9441779415965565 0.19610595254729646 0.05944188239097932 0.7741463454988553 1.544614375497134 0.025652673453208177 0.04768965869585876 2.3723856949650864e-06 5.624814703344004 -0.09534681502739972 S(ph)QS(ph)RS(ph)NSPLPVPPSK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSRSNSPLPVPPSK 15 1 Q13247;Q13247-3 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 3 S(0.99)QS(0.874)RS(0.806)NS(0.319)PLPVPPS(0.011)K 151.39 5.6152e-06 499570000.0 493620.0 505080.0 455200.0 402070.0 414610.0 388720.0 359020.0 372250.0 547780.0 414350.0 True False 466237.91459292534 480815.19865946396 484542.9203457509 440282.6119132468 447237.4481917968 386293.85429163766 395313.2452975419 370958.7516338028 448316.960410067 410679.1813594225 1.1352850004463175 1.1707805520306107 1.1798575197842414 1.0720840790025723 1.089019040876043 0.9406219546190168 0.9625840881171123 0.9032811217891837 1.0916476431214668 1.0 18.647652288783753 -5.845452073491179 1.5712393821123558 0.9733360995589904 1.1592063004905002 0.6760211990605405 0.05275293706500406 0.2073671325062602 1.0609299949108275 0.019411791545062528 0.024504975596906047 1.4274073428178785e-06 5.845452073491179 0.18587020093150985 S(ph)QS(ph)S(ph)SQGDNPLAPGYLPPHYK ddPTM_KYSE-520_SHP099_60min_R1 2 SQSSSQGDNPLAPGYLPPHYK 21 0 Q6ZRV2;A0A494C1T9 Q6ZRV2 FAM83H Protein FAM83H 3 S(0.906)QS(0.749)S(0.749)S(0.595)QGDNPLAPGYLPPHYK;S(0.925)QS(0.727)S(0.727)S(0.621)QGDNPLAPGYLPPHYK 105.03 8.9247e-06 293550000.0 341660.0 335540.0 302720.0 321030.0 268820.0 291510.0 273910.0 294450.0 384490.0 293080.0 True False 322707.43871767534 319420.1547441917 322233.81556912547 351540.594678811 289974.60462342633 289690.5779598556 301599.4959039878 293428.62167514674 314676.30820414546 290483.5392127897 1.1109319295413862 1.0996153365860943 1.1093014648691593 1.2101911028469492 0.9982479744265629 0.9972702024524935 1.038267079509298 1.0101385519824573 1.083284474765483 1.0 18.148096887399063 -5.782759560804361 24.999993149959543 1.021365013370546 1.1285026196558088 0.6793860481758311 0.037419346618201677 144.14836980664617 169027.21116093578 0.011719192725573941 0.013300447539535142 1.6490751191189686e-06 5.782759560804361 0.1071376062852627 S(ph)QS(ph)SS(ph)QGDNPLAPGYLPPHYK ddPTM_KYSE-520_SHP099_60min_R1 8 SQSSSQGDNPLAPGYLPPHYK 21 0 Q6ZRV2;A0A494C1T9 Q6ZRV2 FAM83H Protein FAM83H 3 S(0.99)QS(0.859)S(0.327)S(0.823)QGDNPLAPGYLPPHYK;S(0.998)QS(0.515)S(0.515)S(0.973)QGDNPLAPGYLPPHYK;S(0.788)QS(0.61)S(0.61)S(0.992)QGDNPLAPGYLPPHYK;S(0.996)QS(0.624)S(0.384)S(0.996)QGDNPLAPGYLPPHYK;S(0.884)QS(0.563)S(0.563)S(0.99)QGDNPLAPGYLPPHYK;S(0.966)QS(0.601)S(0.576)S(0.856)QGDNPLAPGYLPPHYK;S(0.986)QS(0.518)S(0.518)S(0.978)QGDNPLAPGYLPPHYK;S(0.97)QS(0.783)S(0.257)S(0.99)QGDNPLAPGYLPPHYK 182.41 9.8353e-11 5488920000.0 3597250.0 3470890.0 3094640.0 3259810.0 3060760.0 3254187.0 2999150.0 3329710.0 3949330.0 3320923.0 True False 3397703.37155991 3304143.234487898 3294125.4459990696 3569621.3623023825 3301624.3986578314 3233876.4118536236 3302333.350883305 3318160.013170155 3232231.2265075254 3291502.205858995 1.032265257338085 1.0038405043771204 1.0007969735324511 1.0844961172890375 1.0030752501945217 0.982492554948681 1.00329063884722 1.0080989790204935 0.9819927268327618 1.0 21.65031473392875 -5.978223066603741 24.99978280760796 0.995810095100953 1.0285253366422478 0.35265245890423713 0.022622390247745743 293.14117681311126 336522.7040096071 0.007161916087823754 0.008120244373062585 1.0514216935561737e-06 5.978223066603741 0.03271524154129479 S(ph)QSFAGVLGSHER ddPTM_KYSE-520_SHP099_60min_R1 6 SQSFAGVLGSHER 13 0 A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4;H3BSV5;H3BMG9;H3BS40;H3BUP6;H3BQI5;H3BU12;H3BV02 A0A0A0MTL6 FAM65A Protein FAM65A 1 S(0.5)QS(0.5)FAGVLGSHER;S(0.5)QS(0.5)FAGVLGSHER;S(0.5)QS(0.5)FAGVLGSHER;S(0.5)QS(0.5)FAGVLGSHER;S(0.5)QS(0.5)FAGVLGSHER;S(0.5)QS(0.5)FAGVLGSHER 184.55 2.1427e-08 4005630000.0 2271710.0 2456470.0 2374490.0 2462490.0 2440310.0 2388720.0 2171770.0 2307890.0 2621910.0 2610000.0 True False 2145693.717758386 2338457.493963357 2527553.424718326 2696524.309225385 2632348.51353543 2373811.1124293054 2391313.706032653 2299884.4682555776 2145837.2369724354 2586877.430549276 0.829453182597363 0.903969189397129 0.9770673302374617 1.0423858035874656 1.01757759468971 0.9176357118416971 0.9244016271481796 0.8890581521549861 0.8295086623090627 1.0 21.3027802682916 -9.259699462037641 10.749180613672081 0.9999931191243232 0.9313313873808227 0.09355533652599912 0.06736587674910118 0.0 0.0 0.07208024443866486 0.01748202713770325 5.499212955768434e-10 9.259699462037641 -0.06866173174350054 S(ph)QSFNNQAFHAK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSFNNQAFHAK 12 0 Q6NUP7 Q6NUP7 PPP4R4 Serine/threonine-protein phosphatase 4 regulatory subunit 4 1 S(0.5)QS(0.5)FNNQAFHAK 152.94 9.187899999999999e-06 695760000.0 277800.0 297130.0 280090.0 301460.0 306380.0 292010.0 291160.0 306940.0 334130.0 285970.0 True False 262389.88021942944 282855.42879877763 298145.0495598455 330110.6677627461 330490.3629362595 290187.4572743906 320593.29424776474 305875.29678033496 273460.4147318552 283436.52828129305 0.9257447577787993 0.9979498073659062 1.0518935275129928 1.1646722804730796 1.1660118931751395 1.0238181332308647 1.131093780296363 1.0791668195878155 0.9648030068321428 1.0 18.112666174027563 -4.597653522617487 2.300019880310967 1.083689806642414 0.9290410903837931 0.3469605185250614 0.06395245440441746 0.3657255104450405 3.468685145602837 0.01769682575891751 0.08551177859746462 2.525494792711441e-05 4.597653522617487 -0.15464871625862098 S(ph)QSFTHSPSGDPK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSFTHSPSGDPK 13 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(0.429)QS(0.429)FT(0.141)HSPSGDPK 125.45 4.5533e-05 1153400000.0 1072900.0 1255900.0 1170500.0 2127900.0 1234700.0 1151300.0 1196400.0 1252400.0 1554500.0 1250800.0 True False 1013384.0982268753 1195564.678855667 1245952.3028662167 2330134.976223536 1331863.8655179834 1144114.3096469482 1317343.7877387858 1248055.7167123584 1272241.9857560517 1239718.885107676 0.8174305565562613 0.9643836947372354 1.0050280897011579 1.8795672181933016 1.0743273184890654 0.9228820528515027 1.0626149230794106 1.0067247758381597 1.0262342544257934 1.0 20.24158158587203 -5.991795961268034 24.996968518111984 1.0067730745644223 1.182658302963251 0.07551598546718985 0.2662424215073873 549.5648220038637 1674460.395072944 0.08863581578453407 0.10034242596338398 1.0190700515716085e-06 5.991795961268034 0.17588522839882859 S(ph)QSIEQESQEK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSIEQESQEK 11 0 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 S(1)QSIEQESQEK 188.92 0.0033152999999999998 0.0 680260.0 579370.0 506030.0 539180.0 617700.0 587650.0 571240.0 620440.0 753580.0 606020.0 True False 642524.6217353095 551536.1955479002 538649.5034766266 590423.5050896214 666309.4757677647 583982.2583723012 628986.5139651491 618287.8384517849 616748.8682058828 600651.1342764253 1.06971349102558 0.9182305069852378 0.8967759698406479 0.9829724300793594 1.1093119412326338 0.9722486565779913 1.04717443799196 1.0293626419212638 1.0268004720391475 1.0 19.196167773219333 -5.532096286727064 24.987698310489968 1.0316256684715255 0.9543448924911848 0.25762593457526806 0.05362786653411606 237.6056499697387 644118.2691195649 0.015477688188223261 0.020006907241083553 2.9369984226033322e-06 5.532096286727064 -0.07728077598034067 S(ph)QSLPHSATVTLGGTSDPSTLSSSALSER ddPTM_KYSE-520_SHP099_60min_R1 1 SQSLPHSATVTLGGTSDPSTLSSSALSER 29 0 F8WDP1;A0A0A0MRY0;Q8WUA7-3;Q8WUA7-4;Q8WUA7 F8WDP1 TBC1D22A TBC1 domain family member 22A 1 S(0.476)QS(0.476)LPHS(0.036)AT(0.012)VTLGGTSDPSTLSSSALSER 86.376 4.3218999999999994e-05 0.0 60786.0 79607.0 68221.0 73986.0 59425.0 81641.0 41221.0 54781.0 74141.0 69594.0 True False 57414.079406113175 75782.56022745698 72618.63481745942 81017.60719529809 64101.40941800127 81131.4482358087 45388.02095819168 54590.97749698152 60678.86334251483 68977.45130331276 0.8323601165495045 1.098657007406961 1.0527880263092844 1.174552055265734 0.9293096252009921 1.1762024647598457 0.6580124388564041 0.7914322211896468 0.8796912932560126 1.0 16.073837202172477 -6.757196460746613 24.99999239555564 0.8149033419354945 1.047587020875596 0.4002540109103828 0.12618773894620716 97.91284298709121 576923.2714518422 0.04742149051110781 0.03541267080042544 1.749055293715561e-07 6.757196460746613 0.23268367894010145 S(ph)QSLPTTLLSPVR ddPTM_KYSE-520_SHP099_60min_R1 2 SQSLPTTLLSPVR 13 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7 P28290-3 SSFA2 Sperm-specific antigen 2 1 S(0.996)QS(0.004)LPTTLLSPVR;S(0.998)QS(0.002)LPTTLLSPVR 146.48 8.4071e-06 1304120000.0 889070.0 780500.0 618140.0 725200.0 478590.0 545410.0 636850.0 738570.0 646800.0 552770.0 True False 839751.514782894 743003.6084456162 657986.2934589688 794122.78996067 516252.3101953927 542005.8938804327 701229.0130570425 736008.073053533 529357.4245011342 547872.8878485527 1.5327488061702093 1.356160571046551 1.2009834909751083 1.4494653916515536 0.9422848285533326 0.9892913226804139 1.2799118711836708 1.3433920337685812 0.9662048191139244 1.0 19.063481686340896 -1.00000053542637 0.43020022870147356 1.1089219149157215 9.736821399158597 0.4274668828938235 0.15679452214876144 86.28723252718534 1.086413277203011 0.1073001698480388 645.2094955969136 0.09999987671359822 1.00000053542637 8.627899484242874 S(ph)QSLQDQPTR ddPTM_KYSE-520_SHP099_60min_R1 1 SQSLQDQPTR 10 0 Q8N4C8 Q8N4C8 MINK1 Misshapen-like kinase 1 1 S(0.677)QS(0.323)LQDQPTR 117.2 0.0014329 397970000.0 785660.0 666890.0 682050.0 623190.0 690750.0 721600.0 680800.0 721270.0 882800.0 691500.0 True False 742077.8736256182 634851.6033777028 726016.0343185854 682417.7902310936 745108.0951701207 717096.2267360708 749621.907967709 718768.0827156828 722505.7735769972 685373.8479788586 1.0827344460457275 0.9262851292763153 1.059299295500666 0.9956869411395222 1.0871557141659491 1.0462847814382767 1.0937416275486955 1.0487241158023501 1.0541776224868211 1.0 19.386531617984843 -5.752852331835678 24.998666177053828 1.058950106668713 1.0126858452491507 0.14577312544507703 0.04539003245963643 298.9699536333304 870359.7717685001 0.012526925828959009 0.01592203514100138 1.7666384083410808e-06 5.752852331835678 -0.0462642614195623 S(ph)QSRPQQVK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSRPQQVK 9 1 Q96MT3 Q96MT3 PRICKLE1 Prickle-like protein 1 1 S(1)QSRPQQVK 117.09 0.00073021 0.0 208680.0 191230.0 214170.0 236260.0 244330.0 173500.0 215070.0 252020.0 263170.0 234250.0 True False 197104.10440673327 182043.02375791816 227975.74088411606 258714.0793658408 263557.38095246535 172417.1221434427 236811.37448092666 251145.80144191041 215384.9619758252 232174.7272437422 0.8489472852909136 0.7840776897599424 0.9819145416494106 1.1143076700774455 1.1351682591868706 0.7426179592856176 1.019970507954196 1.0817103326592992 0.9276847852165635 1.0 17.824851414493537 -4.81098607257661 6.349585413090565 1.0046498780823125 0.8166576129611017 0.3254667314249746 0.1059549853004166 0.20640709279064134 18.79018601404423 0.02881025481950526 0.062441435666692205 1.5453039952173615e-05 4.81098607257661 -0.1879922651212108 S(ph)QSRS(ph)NS(ph)PLPVPPSK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSRSNSPLPVPPSK 15 1 Q13247;Q13247-3 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 3 S(0.939)QS(0.292)RS(0.813)NS(0.955)PLPVPPSK 69.361 0.044748 0.0 324090.0 351940.0 312010.0 295800.0 338500.0 308530.0 297610.0 334670.0 466250.0 333970.0 True False 306112.0816426019 335032.2741272903 332122.6638336509 323912.7430644873 365138.0241984592 306604.34982660745 327695.3231936985 333509.1078825656 381590.7532060205 331011.2856247283 0.9247783835069752 1.0121475873397279 1.0033575236168308 0.978554983263354 1.1030984140293658 0.9262655478587177 0.9899823281711634 1.0075460335230657 1.1528028492618672 1.0 18.336520880101535 -7.552178801064743 24.505567043920895 1.0776592901513733 0.9941252322669463 0.2504993141051862 0.05799675263447346 224.45488512121977 187721.4483726226 0.037040603393891966 0.014000459857384897 2.8042788655609073e-08 7.552178801064743 -0.08353405788442703 S(ph)QSS(ph)S(ph)QGDNPLAPGYLPPHYK ddPTM_KYSE-520_SHP099_60min_R1 2 SQSSSQGDNPLAPGYLPPHYK 21 0 Q6ZRV2;A0A494C1T9 Q6ZRV2 FAM83H Protein FAM83H 3 S(0.943)QS(0.415)S(0.648)S(0.995)QGDNPLAPGYLPPHYK;S(0.901)QS(0.223)S(0.876)S(1)QGDNPLAPGYLPPHYK 159.76 3.0053000000000004e-09 1603560000.0 1494270.0 1298530.0 1169500.0 1165620.0 1263550.0 1360370.0 1221410.0 1243690.0 1493660.0 1245390.0 True False 1411379.8643466062 1236146.669666734 1244887.8412661594 1276400.174343567 1362984.1963839398 1351879.4262263717 1344882.0426128658 1239375.9296694288 1222448.9961044586 1234356.813498758 1.1434131921272264 1.0014500314239791 1.0085315912321589 1.034060946061162 1.104205997389515 1.0952095953474736 1.089540745354519 1.004066179337921 0.9903530184594299 1.0 20.235328061587605 -7.345476866514802 6.300836038321646 0.9965476106590296 1.0642521059601315 0.3678293854154876 0.041835019535820514 0.3056754050990113 18.73145562067265 0.02493196216815903 0.0117818637229482 4.513600672152609e-08 7.345476866514802 0.0677044953011019 S(ph)QSSSNCSNPISVPLR ddPTM_KYSE-520_SHP099_60min_R1 1 SQSSSNCSNPISVPLR 16 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.999)QS(0.001)SSNCSNPISVPLR 157.37 1.2044e-06 337430000.0 263950.0 267610.0 336990.0 280780.0 276100.0 258960.0 307090.0 342620.0 368470.0 331810.0 True False 249308.16732872027 254753.61390920062 358712.9146030638 307465.24678041507 297827.49920589244 257343.73458366512 338133.6541095819 341431.5311881087 301565.13637280965 328870.42154427397 0.7580741562529281 0.7746321870874137 1.0907424052265287 0.9349130436743237 0.9056074359238099 0.7825079962352904 1.0281668157379755 1.0381947077662128 0.9169725114127104 1.0 18.327159733110836 -4.664035141514493 9.254313595609553 0.9563306713281031 0.7632311127026583 0.4781849632960372 0.08167186272357126 0.25440939187498146 21.871955624243615 0.02177833019347088 0.0578008971361177 2.1675287092608857e-05 4.664035141514493 -0.1930995586254448 S(ph)QSSSNCSNPISVPLRR ddPTM_KYSE-520_SHP099_60min_R1 1 SQSSSNCSNPISVPLRR 17 1 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.986)QS(0.008)S(0.004)S(0.001)NCSNPISVPLRR 62.998999999999995 0.016947999999999998 858520000.0 289580.0 283160.0 358980.0 263890.0 335880.0 293660.0 264860.0 279470.0 437630.0 289490.0 True False 273516.42013658135 269556.5685681749 382120.42518830765 288970.0262585782 362311.84510422003 291827.15901235404 291634.6335844996 278500.58379878826 358167.4237545322 286925.3438198122 0.9532668550476616 0.9394658728280734 1.3317764826946676 1.0071261827608022 1.2627390814655615 1.0170839394223055 1.0164129445729437 0.9706377975926914 1.2482948316320908 1.0 18.130315879937285 S(ph)QTPPGVATPPIPK ddPTM_KYSE-520_SHP099_60min_R1 1 SQTPPGVATPPIPK 14 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.64)QT(0.36)PPGVATPPIPK 120.7 0.00010037 2358400000.0 1495000.0 1960800.0 1263600.0 1003600.0 1164800.0 1646800.0 1268400.0 1643400.0 1831700.0 1614900.0 True False 1412069.3697913853 1866600.2247791945 1345053.6778314828 1098981.8422566575 1256463.133194579 1636521.7103505563 1396622.250391071 1637699.4289724436 1499109.4533993946 1600593.2423731887 0.8822162510805803 1.1661927436427253 0.84034696775127 0.6866090729129936 0.7849983993007679 1.0224469696773784 0.8725653797715082 1.0231827709982317 0.936596140551409 1.0 20.610175292687575 -6.276068994827601 24.519616223595346 0.9662576141296293 0.8763466082994164 0.14167507103850308 0.12119420445983065 1630.047135497476 2731992.7527944576 0.04708160984414916 0.041709813895492096 5.295793048181414e-07 6.276068994827601 -0.08991100583021294 S(ph)QVAELNDDDKDDEIVFK ddPTM_KYSE-520_SHP099_60min_R1 6 SQVAELNDDDKDDEIVFK 18 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 S(1)QVAELNDDDKDDEIVFK;S(1)QVAELNDDDKDDEIVFK;S(1)QVAELNDDDKDDEIVFK;S(1)QVAELNDDDKDDEIVFK;S(1)QVAELNDDDKDDEIVFK;S(1)QVAELNDDDKDDEIVFK 158.67 2.1147e-08 2768630000.0 3321920.0 3115650.0 2702730.0 2909620.0 2924580.0 3120900.0 3356070.0 3668800.0 3883120.0 3372250.0 True False 3137646.4755166546 2965969.4973140066 2876952.3003208996 3186149.4099908466 3154727.8074160414 3101421.3054609243 3695334.307686819 3656073.789104353 3178043.2934892494 3342374.4885707996 0.93874773345889 0.8873839563627881 0.8607510349778565 0.9532592535294407 0.9438582714784315 0.9279095792725168 1.105601517820029 1.0938552222697497 0.950833996715964 1.0 21.672441955187676 -6.681483095234091 7.593211248049743 1.0450925879601778 0.9165709301876225 0.5886451696400254 0.04856020225980366 0.16139811582128502 13.117060703179698 0.01915490713918519 0.014766754885721527 2.0821734515405465e-07 6.681483095234091 -0.1285216577725553 S(ph)QVIEK ddPTM_KYSE-520_SHP099_60min_R1 4 SQVIEK 6 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)QVIEK;S(1)QVIEK;S(1)QVIEK;S(1)QVIEK 107.21 0.0098288 3012290000.0 3938290.0 3786440.0 3325160.0 3685060.0 3553240.0 3866480.0 4220270.0 4018870.0 4470510.0 4283930.0 True False 3719825.2029135223 3604533.738837688 3539505.1340441117 4035286.9944463093 3832859.772829938 3842347.8641220634 4646896.077466037 4004929.477981314 3658778.07638616 4245977.713047112 0.8760821309737873 0.8489290294109684 0.8336136864703412 0.9503787507048402 0.9027036955592729 0.9049383025057413 1.0944230967550714 0.9432290390208359 0.8617044939127695 1.0 22.017665367943632 -5.624574816881481 1.1501321478279343 0.9635705544223512 0.8514192575968167 0.33424142453421357 0.061400310828064325 0.6001384231826712 1.6545657124874134 0.025795333695213044 0.04454405586972202 2.3736964655122813e-06 5.624574816881481 -0.11215129682553449 S(ph)QVIEKFEALDIEK ddPTM_KYSE-520_SHP099_60min_R1 3 SQVIEKFEALDIEK 14 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(1)QVIEKFEALDIEK;S(1)QVIEKFEALDIEK;S(1)QVIEKFEALDIEK 223.36 2.7547000000000004e-14 485124000.0 623617.0 777086.0 827700.0 594562.0 611191.0 654045.0 439212.0 527076.0 1042772.0 604228.0 True False 589023.7218603317 739753.6221301336 881054.866366825 651068.993718417 659288.2544989089 649962.8625493259 483611.83525604196 525247.6963764632 853430.8909429458 598875.0100022713 0.9835503435985713 1.235238755625031 1.4711832212926759 1.087153384002361 1.1008778851807632 1.0853063689314084 0.8075338379108653 0.8770572951014789 1.4250567759367838 1.0 19.191895406890033 -5.502222783281394 23.84324751034214 1.0384283648643264 1.2386243840824154 0.15417486214633214 0.18856471129884841 737.9610411923518 851830.0573991096 0.05451004865917941 0.07970085044657922 3.1461340042455963e-06 5.502222783281394 0.20019601921808894 S(ph)RADLTAEMISAPLGDFR ddPTM_KYSE-520_SHP099_60min_R1 9 SRADLTAEMISAPLGDFR 18 1 Q9H3Q1;Q9H3Q1-2;J3KRZ9;J3QQS6;J3QR93 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 S(0.5)RADLT(0.5)AEMISAPLGDFR;S(0.5)RADLT(0.5)AEMISAPLGDFR;S(1)RADLTAEMISAPLGDFR;S(0.978)RADLT(0.022)AEMISAPLGDFR;S(1)RADLTAEMISAPLGDFR;S(0.866)RADLT(0.134)AEMISAPLGDFR;S(0.871)RADLT(0.129)AEMISAPLGDFR;S(0.996)RADLT(0.004)AEMISAPLGDFR;S(0.77)RADLT(0.228)AEMIS(0.002)APLGDFR 255.83 5.3375e-25 1660653000.0 1154681.0 1241045.0 1106672.0 1081656.0 1182630.0 963691.0 955553.4 1059675.0 1243691.0 1166883.0 True False 1090628.5431304923 1181423.3353534772 1178009.847857807 1184456.2610282658 1275696.252755759 957676.2470059751 1052150.062974488 1055999.2347550048 1017868.065298764 1156545.3244412374 0.9430054491443373 1.0215106233940803 1.0185591718395817 1.0241330244454647 1.1030231377850126 0.8280490411983275 0.9097352613334146 0.9130634246999273 0.8800935370090467 1.0 20.141390374913755 -6.263785919822382 24.999099226245733 0.9009764064670965 1.0219387236015474 0.538832402179507 0.053483226319203755 159.59170769703215 1700217.884718485 0.017947324405575917 0.016566887325002697 5.447711249607897e-07 6.263785919822382 0.12096231713445083 S(ph)RAKIMS(ph)EQERK ddPTM_KYSE-520_SHP099_60min_R1 1 SRAKIMSEQERK 12 3 H0Y9C1;H0Y9Z5;Q96LI5-2;Q96LI5 H0Y9C1 CNOT6L CCR4-NOT transcription complex subunit 6-like 2 S(1)RAKIMS(1)EQERK 44.299 0.050558 285960000.0 1432300.0 628770.0 836300.0 508440.0 818110.0 1159000.0 592620.0 749640.0 777950.0 1304400.0 True False 1352847.4637807386 598562.9453969894 890209.2361273118 556761.9847319395 882490.6025908462 1151766.2510907792 652527.8130138421 747039.6738072921 636693.8905235889 1292844.0308078453 1.046411965823441 0.4629815593633301 0.6885666135388787 0.43064899668062956 0.682596339203743 0.8908779587055738 0.5047227642812445 0.577826602440588 0.4924754072041814 1.0 20.302116807695455 S(ph)RAPGPRDTDDDEEEPDPYGFIVQTAEIAEIAR ddPTM_KYSE-520_SHP099_60min_R1 5 SRAPGPRDTDDDEEEPDPYGFIVQTAEIAEIAR 33 2 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(0.5)RAPGPRDT(0.5)DDDEEEPDPYGFIVQTAEIAEIAR;S(0.609)RAPGPRDT(0.391)DDDEEEPDPYGFIVQTAEIAEIAR;S(0.498)RAPGPRDT(0.498)DDDEEEPDPY(0.003)GFIVQTAEIAEIAR;S(0.569)RAPGPRDT(0.429)DDDEEEPDPY(0.001)GFIVQTAEIAEIAR;S(0.491)RAPGPRDT(0.491)DDDEEEPDPY(0.017)GFIVQTAEIAEIAR 301.89 2.3214e-54 299964000.0 107890.3 134734.0 124155.7 107728.4 96905.09999999999 107866.3 78453.79999999999 96855.59999999999 179181.0 88437.1 True False 101905.40998501911 128261.176400143 132158.9750781436 117966.87474627554 104530.98005540365 107193.06641072771 86384.67573930226 96519.63052986698 146646.24718543267 87653.61609702258 1.1625921955372773 1.4632730754447423 1.50774127711809 1.3458300980498015 1.1925461231365486 1.222916648322611 0.9855232400644401 1.10114830200537 1.6730199359158437 1.0 16.419525989275048 -5.6991021198541505 4.1691884042228375 1.1909275824168846 1.391831192824776 0.15595619739708855 0.19788412554257143 0.3889174167911685 13.478418538767963 0.06063353081025182 0.07766364884928183 1.9993916780874447e-06 5.6991021198541505 0.2009036104078914 S(ph)RAS(ph)PATHR ddPTM_KYSE-520_SHP099_60min_R1 10 SRASPATHR 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RAS(1)PATHR;S(1)RAS(0.999)PAT(0.001)HR;S(1)RAS(1)PATHR;S(1)RAS(0.999)PAT(0.001)HR;S(1)RAS(0.97)PAT(0.03)HR;S(1)RAS(0.941)PAT(0.059)HR;S(0.994)RAS(0.991)PAT(0.015)HR;S(0.99)RAS(0.647)PAT(0.363)HR;S(0.999)RAS(0.938)PAT(0.063)HR;S(0.996)RAS(0.816)PAT(0.188)HR 101.56 0.0020302 7709480000.0 2102404.0 1729395.0 1576047.0 1986302.0 1833592.0 2043743.0 1941489.0 1906386.0 2104622.0 2108176.0 True False 1985779.4590815317 1646312.2683251845 1677641.5113843589 2175079.544876525 1977885.2586886303 2030987.2418490287 2137753.6552266707 1899773.1919198378 1722475.6980031342 2089499.2007761078 0.9503614350960023 0.7878980129371146 0.8028916741203961 1.0409573471330498 0.9465834004406316 0.9719971374454961 1.0230937893791199 0.9092002481810955 0.8243485794889756 1.0 20.994725776160344 -5.247552508849643 24.946727247696725 0.9583090055334428 0.8411351344815273 0.3471855944961547 0.07048050999475529 873.007525316997 1568290.3539095607 0.019526528949451685 0.03359458443485016 5.6551937821617665e-06 5.247552508849643 -0.11717387105191546 S(ph)RAS(ph)PATHRR ddPTM_KYSE-520_SHP099_60min_R1 1 SRASPATHRR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.989)RAS(0.55)PAT(0.461)HRR 50.088 0.045896 695370000.0 17137.0 18233.0 21918.0 13974.0 12716.0 26479.0 11511.0 9444.8 21866.0 12213.0 True False 16186.376448237448 17357.059311709036 23330.869350039924 15302.084758563702 13716.676855857044 26313.734739113654 12674.644216533918 9412.03819323289 17895.685597003416 12104.802321570223 1.3371863511884072 1.4338986173098855 1.9274060600283696 1.264133387068706 1.1331599221091393 2.173826060110353 1.0470756877994 0.7775457990306089 1.4783955261387536 1.0 13.56329189903343 S(ph)RASPVSR ddPTM_KYSE-520_SHP099_60min_R1 3 SRASPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.665)RAS(0.307)PVS(0.029)R;S(0.841)RAS(0.159)PVSR;S(0.709)RAS(0.289)PVS(0.002)R 72.652 0.013019999999999999 41619820000.0 391945.0 352207.0 339621.0 299383.0 313933.0 341378.0 344742.0 326354.0 391652.0 332282.0 True False 370203.02952701354 335286.4470465152 361513.5130728134 327836.2703072188 338637.7410655684 339247.33327426034 379591.8857176909 325221.95414559584 320537.8695434728 329338.2399914839 1.1240815203742702 1.0180610883667354 1.0976967420551025 0.9954394312537045 1.0282369307442858 1.0300878916551952 1.1525897682804962 0.9875013425528887 0.9732786254999157 1.0 18.329210509732032 -1.000000000134377 0.12212346391299604 0.9792227222139444 1.305622834363486 0.1937911195019012 0.05280153900666438 186.40922094557325 1.563108015609631 0.35757670316108814 10.376603205383784 0.09999999996905856 1.000000000134377 0.32640011214954157 S(ph)RDAT(ph)PPVS(ph)PINMEDQER ddPTM_KYSE-520_SHP099_60min_R1 2 SRDATPPVSPINMEDQER 18 1 P17275 P17275 JUNB Transcription factor jun-B 3 S(1)RDAT(1)PPVS(1)PINMEDQER;S(1)RDAT(1)PPVS(1)PINMEDQER 156.58 0.00010281 274350000.0 448310.0 378000.0 357980.0 356950.0 367810.0 342320.0 321940.0 343455.0 428760.0 389750.0 True False 423441.3506161718 359840.31261043285 381055.9635882514 390874.4206790688 396754.5544473718 340183.45390284323 354484.83703161584 342263.6347679998 350907.99216002866 386297.11822091177 1.0961545676714533 0.9315117707004248 0.9864323227240253 1.0118491757827182 1.0270709661895012 0.8806264345681774 0.9176481529662786 0.8860113591949436 0.9083888427025616 1.0 18.559351389532136 -6.258239681791965 24.999805467792296 0.911355241517372 1.0049360951480089 0.4630877476780062 0.04907641205003895 248.01558523233854 1937793.5509328211 0.01585842238992712 0.015243380942664782 5.517728385812688e-07 6.258239681791965 0.09358085363063684 S(ph)RDATPPVSPINMEDQER ddPTM_KYSE-520_SHP099_60min_R1 1 SRDATPPVSPINMEDQER 18 1 P17275 P17275 JUNB Transcription factor jun-B 1 S(0.5)RDAT(0.5)PPVSPINMEDQER 89.87299999999999 0.00065218 0.0 37395.0 36094.0 48508.0 32322.0 35121.0 27662.0 45612.0 43014.0 40642.0 34789.0 True False 35320.624804915635 34359.99006180145 51634.90329554418 35393.873162036354 37884.82288884515 27489.351197302105 50222.90609022196 42864.794473543094 33262.43730144577 34480.79652543243 1.0243564060030852 0.9964964131979412 1.4974974043148679 1.0264807292351978 1.0987223819177718 0.797236548089208 1.4565471552601292 1.24314977590285 0.9646655719484896 1.0 15.073505481413186 -7.7815022155328775 24.477344219854693 0.9823325204340394 1.1431480412896384 0.09202434629841805 0.20131193177101483 566.583680644222 691226.8331222637 0.19459046865432578 0.050526010748230564 1.6538563476794197e-08 7.7815022155328775 0.16081552085559903 S(ph)RDS(ph)GDENEPIQER ddPTM_KYSE-520_SHP099_60min_R1 1 SRDSGDENEPIQER 14 1 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-4;Q8WX93-7 Q8WX93-3 PALLD Palladin 2 S(1)RDS(1)GDENEPIQER 75.564 0.047473 194540000.0 355480.0 322430.0 283980.0 338220.0 350000.0 334900.0 317410.0 346220.0 422790.0 342560.0 True False 335760.81576818845 306939.97882270283 302285.805184065 370364.3271104486 377543.00877240946 332809.76487515256 349496.90042307647 345019.0436283551 346021.99366857536 339525.1849076475 0.988912842679158 0.9040271310247339 0.8903192417560666 1.090830205161922 1.1119735016861945 0.9802211431404667 1.029369590117862 1.0161810050179398 1.0191349833523986 1.0 18.373159067445137 -5.255425814854751 24.98354969220787 1.0367031890156866 0.9253804749828334 0.5530502348764293 0.044314676873927684 372.5733532157915 1547864.3800763194 0.012741636136724598 0.021348758770569444 5.553594741955391e-06 5.255425814854751 -0.11132271403285321 S(ph)RECDITK ddPTM_KYSE-520_SHP099_60min_R1 8 SRECDITK 8 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 S(1)RECDITK;S(1)RECDITK;S(1)RECDITK;S(1)RECDITK;S(1)RECDITK;S(1)RECDITK;S(1)RECDITK;S(1)RECDITK 146.79 0.00065986 17385020000.0 13702240.0 12259270.0 11967950.0 11606970.0 11867630.0 11649310.0 11841070.0 12165800.0 14767060.0 11251480.0 True False 12942149.432461767 11670316.26766058 12739423.206397058 12710092.939037228 12801544.963422036 11576602.335197857 13038080.913306702 12123599.679319058 12085734.151289 11151800.640718993 1.1605434718054055 1.0464961348975619 1.1423646832316137 1.1397345907196712 1.1479352416576807 1.0380926550038716 1.1691458028491168 1.0871427915462994 1.0837473284054147 1.0 23.410773339890547 -8.222081819927542 1.2834363872620878 1.0002312617244493 1.1175132890827433 0.4087330286273506 0.042964057726521065 0.7989189809658966 2.4981915589401886 0.03926973079527952 0.011895553858922244 5.996780878525991e-09 8.222081819927542 0.11728202735829396 S(ph)REDLSAQPVQTK ddPTM_KYSE-520_SHP099_60min_R1 12 SREDLSAQPVQTK 13 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(1)REDLSAQPVQTK;S(1)REDLSAQPVQTK;S(0.727)REDLS(0.273)AQPVQTK;S(0.999)REDLS(0.001)AQPVQTK;S(0.817)REDLS(0.183)AQPVQTK;S(1)REDLSAQPVQTK;S(0.986)REDLS(0.014)AQPVQTK;S(1)REDLSAQPVQTK;S(1)REDLSAQPVQTK;S(0.999)REDLS(0.001)AQPVQTK;S(1)REDLSAQPVQTK;S(0.997)REDLS(0.003)AQPVQTK 223.65 9.8322e-12 82278020000.0 80123810.0 69841870.0 66287040.0 64186170.0 72912620.0 66958950.0 65747710.0 70843060.0 82984290.0 65133820.0 True False 75679182.53644472 66486561.730415806 70560008.66141406 70286404.29852425 78650428.37794103 66541034.35588861 72394130.16261393 70597321.95975454 67916434.79971446 64556785.02814519 1.172288590633044 1.0298927014632047 1.092991366138379 1.0887531692893486 1.218313897503591 1.0307364954261329 1.121402345718608 1.0935693580306984 1.0520417764004906 1.0 25.94406539742074 -7.981595282769024 1.89896784381359 1.0001451618516213 1.1053189231602554 0.2858364667746113 0.05405294887354607 0.44634685046220374 3.6692510029044607 0.049917290888223345 0.01413794206657809 1.0432892134240409e-08 7.981595282769024 0.1051737613086341 S(ph)REDLTAVVSVSTK ddPTM_KYSE-520_SHP099_60min_R1 3 SREDLTAVVSVSTK 14 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;A0A3B3IT83;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(0.997)REDLT(0.003)AVVSVSTK;S(0.812)REDLT(0.188)AVVSVSTK;S(0.923)REDLT(0.077)AVVSVSTK 163.11 2.4543e-08 3226250000.0 3316510.0 3232260.0 2956170.0 2663890.0 2849840.0 2565750.0 2598790.0 3146630.0 3891500.0 2880610.0 True False 3132536.579001222 3076977.377878828 3146729.448239236 2917065.3046722664 3074106.1946284706 2549736.2025333648 2861501.054946241 3135715.0749589615 3184901.6967318538 2855090.0364806713 1.0971761096762276 1.0777164077360117 1.1021471855640863 1.021706940026308 1.0767107710612762 0.8930493154171414 1.002245469804333 1.0982893831342015 1.1155170786339632 1.0 21.44510481163243 -5.263790805455806 24.452482434412286 1.0288688240914883 1.0908835531538175 0.19068045592766936 0.059157645108270436 284.1958507731767 2955356.2255718093 0.01784904312633947 0.027984654393350437 5.447649965452632e-06 5.263790805455806 0.06201472906232919 S(ph)RENLSAVMLYNPGLEFER ddPTM_KYSE-520_SHP099_60min_R1 5 SRENLSAVMLYNPGLEFER 19 1 A0A1B0GTU3;Q96L93-5;Q96L93-4;Q96L93;Q96L93-6;Q96L93-2 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 S(0.512)RENLS(0.488)AVMLYNPGLEFER;S(0.659)RENLS(0.341)AVMLYNPGLEFER;S(0.96)RENLS(0.04)AVMLYNPGLEFER;S(0.61)RENLS(0.39)AVMLYNPGLEFER;S(0.5)RENLS(0.5)AVMLYNPGLEFER 199.31 2.6354e-13 5540630000.0 1034633.0 1075538.0 930503.0 943686.0 941233.0 926473.0 868148.0 1016662.0 1200739.0 956692.0 True False 977239.8450002477 1023867.540064549 990484.7122374396 1033373.6337104596 1015302.6822168054 920690.5383492912 955908.8721479877 1013135.4368126937 982715.0657669575 948216.4531751138 1.0306084035221585 1.0797825081352646 1.0445765931616036 1.0898077440548475 1.070749910336456 0.9709708529801906 1.008112513706249 1.0684643083551209 1.0363826344463067 1.0 19.854856900941538 -6.1784303889778185 24.999944800460952 1.0205197818955483 1.0644858054050084 0.39662649669164574 0.028352969313214772 106.25503853920273 31999.617298862002 0.009765324635656871 0.009765324445767155 6.630856220324996e-07 6.1784303889778185 0.043966023509460106 S(ph)REPTGVEENKTDSLFVLPSR ddPTM_KYSE-520_SHP099_60min_R1 1 SREPTGVEENKTDSLFVLPSR 21 2 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 S(1)REPTGVEENKTDSLFVLPSR 199.63 1.2257e-13 920060000.0 222530.0 206520.0 172520.0 222440.0 181340.0 127460.0 182390.0 220240.0 227160.0 189570.0 True False 210185.81729744282 196598.46920715994 183640.91524175953 243580.6307209753 195610.4263165396 126664.4748611135 200827.76115486235 219476.03884440224 185913.47023759718 187890.55728322818 1.1186608860849059 1.0463456602068903 0.9773823543720577 1.2963963396723517 1.0410870516588784 0.6741396517877062 1.0688549976044432 1.1681057420760201 0.9894774539273375 1.0 17.51953303825186 -4.291081486605703 4.160069515526553 1.0309106720773773 1.1236234144153314 0.03192549343482409 0.14957366845202077 0.9775933163762272 36.09090702500252 0.039688289025925215 0.25318967275468723 5.115858377638525e-05 4.291081486605703 0.09271274233795412 S(ph)RERPSAPR ddPTM_KYSE-520_SHP099_60min_R1 5 SRERPSAPR 9 2 A0A494C050;Q8N5F7 A0A494C050 NKAP NF-kappa-B-activating protein 1 S(1)RERPSAPR;S(0.984)RERPS(0.016)APR;S(0.802)RERPS(0.198)APR;S(0.945)RERPS(0.055)APR;S(0.815)RERPS(0.185)APR 83.194 0.0054074 6984470000.0 1109126.0 898739.0 948883.0 799684.0 926987.0 962347.0 944908.0 943908.0 1236610.0 857020.0 True False 1047600.5697921355 855562.2294052583 1010049.5164464806 875685.7269262379 999935.6030654572 956340.6354085047 1040428.5220533944 940633.8034577834 1012072.7964012799 849427.4695514704 1.2333019679070516 1.0072222291763502 1.1890944814627018 1.0309128893472599 1.177187739870787 1.125864973396126 1.2248585775107788 1.1073738926226078 1.1914764152090493 1.0 19.696131239049695 -3.9293967085271815 18.614185712265147 1.1252290417802417 3.4614746582710647 0.16170038037489853 0.07740537944821194 9407318.141624356 27474974.834681887 0.01783733884911089 888457425.8391865 0.00011765307744381063 3.9293967085271815 2.3362456164908227 S(ph)RERPSQPEGLR ddPTM_KYSE-520_SHP099_60min_R1 3 SRERPSQPEGLR 12 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(0.993)RERPS(0.007)QPEGLR;S(0.962)RERPS(0.038)QPEGLR;S(0.974)RERPS(0.026)QPEGLR 118.62 8.455e-05 2123610000.0 619510.0 569570.0 592610.0 665535.0 637975.0 546550.0 567490.0 638725.0 714880.0 549871.0 True False 585144.5453374328 542207.0022579998 630810.5888095252 728787.2462996054 688180.0029187953 543138.7787175715 624857.4273686765 636509.4120545358 585075.8126582735 544999.5707331642 1.0736605618794586 0.994876017110605 1.1574515333304267 1.3372253583965206 1.2627165962589966 0.9965857000344249 1.1465282927252274 1.167908097979357 1.0735344467724928 1.0 19.05589556799357 -8.00090350830454 3.9408820327906464 1.0002891099405191 1.1432299653331603 0.1674810322394128 0.10058999243330616 0.3693424306823539 15.651150020954862 0.10641237951873823 0.0279995949253943 9.979217577886229e-09 8.00090350830454 0.14294085539264123 S(ph)RERPSQPEGLRK ddPTM_KYSE-520_SHP099_60min_R1 10 SRERPSQPEGLRK 13 3 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(1)RERPSQPEGLRK;S(1)RERPSQPEGLRK;S(1)RERPSQPEGLRK;S(0.994)RERPS(0.006)QPEGLRK;S(0.998)RERPS(0.002)QPEGLRK;S(0.975)RERPS(0.025)QPEGLRK;S(1)RERPSQPEGLRK;S(0.994)RERPS(0.006)QPEGLRK;S(1)RERPSQPEGLRK;S(1)RERPSQPEGLRK 157.74 2.222e-06 140586100000.0 24110510.0 22229020.0 21937060.0 20151010.0 20378410.0 18016890.0 17205640.0 17348660.0 23799840.0 13718190.0 True False 22773051.947189923 21161104.512760762 23351157.988137003 22066155.93177793 21982074.929707915 17904439.906484004 18944954.00206453 17288481.547667682 19478389.001142673 13596657.509190328 1.67490075643937 1.5563460724415121 1.7174190033361771 1.6229103304884198 1.6167263840285502 1.316826572588295 1.3933537701644063 1.2715243828111398 1.4325865741618284 1.0 23.696748698952504 -7.4452345230327435 0.26054819356250075 0.9273141204913757 1.7780763898591296 0.8194713428744362 0.08969503004444106 0.7801341035266797 0.21665710032397426 0.24654907902759543 0.23855796114400515 3.587281658073502e-08 7.4452345230327435 0.8507622693677539 S(ph)RES(ph)LNVDVVK ddPTM_KYSE-520_SHP099_60min_R1 7 SRESLNVDVVK 11 1 H0YG16;Q07866-4;Q07866-6;Q07866-7;Q07866-9;G3V5R9;G3V3H3;F8W6L3;E7EVH7;G5E9S8;Q07866;G3V2E7;Q07866-8;Q07866-2;Q07866-3;Q07866-5;Q07866-10;H0YJL0;H0YJT3;H0YJU9;H0YGB8 H0YG16 KLC1 Kinesin light chain 1 2 S(1)RES(1)LNVDVVK;S(1)RES(1)LNVDVVK;S(1)RES(1)LNVDVVK;S(1)RES(1)LNVDVVK;S(1)RES(1)LNVDVVK;S(1)RES(1)LNVDVVK;S(1)RES(1)LNVDVVK 122.75 0.00068226 8691890000.0 16232520.0 14218050.0 13104540.0 13221170.0 13136460.0 12579590.0 12290620.0 12902040.0 14706260.0 13124160.0 True False 15332069.756873632 13534993.53627185 13949279.616405344 14477706.021710297 14170224.665766904 12501076.112648016 13533075.814491875 12857285.834598761 12035973.898645738 13007890.152841989 1.1786746026236892 1.0405218200058908 1.0723706498519037 1.1129941790404172 1.0893561138099683 0.9610379520245839 1.040374392424827 0.9884220794860938 0.9252825598328177 1.0 23.63288364372518 -6.250494111621838 22.704250996970202 0.985884216701661 1.0948688486453382 0.6458356465763537 0.042786522190927136 143.55191520126138 297775.5541651927 0.014081822982766733 0.013917943738855704 5.617018941345236e-07 6.250494111621838 0.10898463194367713 S(ph)RESLNVDVVK ddPTM_KYSE-520_SHP099_60min_R1 17 SRESLNVDVVK 11 1 H0YG16;Q07866-4;Q07866-6;Q07866-7;Q07866-9;G3V5R9;G3V3H3;F8W6L3;E7EVH7;G5E9S8;Q07866;G3V2E7;Q07866-8;Q07866-2;Q07866-3;Q07866-5;Q07866-10;H0YJL0;H0YJT3;H0YJU9;H0YGB8 H0YG16 KLC1 Kinesin light chain 1 1 S(0.983)RES(0.017)LNVDVVK;S(0.994)RES(0.006)LNVDVVK;S(1)RESLNVDVVK;S(0.897)RES(0.103)LNVDVVK;S(0.998)RES(0.002)LNVDVVK;S(0.774)RES(0.226)LNVDVVK;S(0.96)RES(0.04)LNVDVVK;S(0.71)RES(0.29)LNVDVVK;S(0.5)RES(0.5)LNVDVVK;S(0.589)RES(0.411)LNVDVVK;S(0.5)RES(0.5)LNVDVVK;S(0.983)RES(0.017)LNVDVVK;S(0.5)RES(0.5)LNVDVVK;S(0.999)RES(0.001)LNVDVVK;S(0.999)RES(0.001)LNVDVVK;S(0.992)RES(0.008)LNVDVVK;S(0.992)RES(0.008)LNVDVVK 168.69 9.1934e-06 60556960000.0 19416482.0 17611419.0 17335757.0 17154329.0 17734861.0 17484334.0 17533869.4 17991745.0 20859294.0 17728715.0 True False 18339411.037662745 16765339.995961135 18453247.634411935 18784671.27052294 19130493.663144197 17375207.78602162 19306364.033026773 17929335.83589986 17071772.029610362 17571652.377831552 1.0436930257509418 0.9541128879326305 1.0501714487416451 1.0690327162527833 1.0887134147542825 0.9888203688767616 1.0987221701121141 1.0203557098887046 0.9715518872401642 1.0 24.066746528023046 -9.881867671476076 10.424070714620544 1.0000004386975256 1.0331014589767356 0.04001701167131788 0.046091432651909674 0.0 0.0 0.04503520126203962 0.010922640686725835 1.3125997842116976e-10 9.881867671476076 0.033101020279209914 S(ph)RESMIQLF ddPTM_KYSE-520_SHP099_60min_R1 3 SRESMIQLF 9 1 G3V5D8;G3V232;P30520;Q8N142;Q8N142-2 G3V5D8 ADSSL1;ADSS Adenylosuccinate synthetase isozyme 2;Adenylosuccinate synthetase isozyme 1 1 S(0.687)RES(0.313)MIQLF;S(0.726)RES(0.274)MIQLF;S(0.83)RES(0.17)MIQLF 77.37899999999999 0.022385 526870000.0 694170.0 644990.0 648900.0 604720.0 604740.0 616540.0 554480.0 662830.0 759670.0 767290.0 True False 655663.0063064129 614003.7122502727 690729.1322767086 662192.4069843016 652329.5975000784 612691.9451660988 610532.2496033119 660530.7974356844 621733.0777222895 760492.4075425873 0.8621558871640622 0.8073765183722611 0.9082656518671793 0.8707416410955019 0.8577726628566613 0.8056516266163883 0.8028117618901045 0.8685567283572058 0.8175401510336219 1.0 19.536574319158003 -10.23727614994203 5.086389847292457 1.0000204800410384 0.8448174848551705 0.6606105278237242 0.03342762990805825 8.039681685428536e-06 1.2056064106284134e-06 0.03351821545263782 0.00812828910284016 5.790603787375012e-11 10.23727614994203 -0.1552029951858679 S(ph)REYEHVR ddPTM_KYSE-520_SHP099_60min_R1 3 SREYEHVR 8 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 S(0.996)REY(0.004)EHVR;S(1)REYEHVR;S(1)REYEHVR 93.096 0.0025515 1105734000.0 1384498.2 1213746.2 1018247.4 1210588.3 1163219.3 1183426.8 889528.6 1117072.6 1309788.5 1089336.7 True False 1307697.3249172647 1155436.0106818113 1083885.2566574444 1325642.2480553554 1254758.0410975337 1176040.5943713188 979450.8318505355 1113197.7358773053 1071963.9254811434 1079686.0243291273 1.2111829693542753 1.0701592728309621 1.003889308774675 1.2278034708090764 1.1621508594382233 1.089243139089498 0.9071626470844857 1.0310383859687364 0.9928478292077717 1.0 20.04218040300961 -6.584493676162453 6.844280510048255 0.9859343534237068 1.1290081658980602 0.5332933211078645 0.06726664415599777 0.1874891139174022 16.62716297397167 0.02678209790683034 0.020705047873023782 2.6031927366407743e-07 6.584493676162453 0.14307381247435336 S(ph)RFSESESR ddPTM_KYSE-520_SHP099_60min_R1 1 SRFSESESR 9 1 A0A1B0GVJ7;Q9BY89-2;Q9BY89 A0A1B0GVJ7;Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 S(0.5)RFS(0.5)ESESR 61.435 0.022266 8861300.0 12203.0 12665.0 13394.0 15248.0 13483.0 14674.0 14421.0 15987.0 21274.0 16719.0 True False 11526.075263922601 12056.554389447429 14257.398671157718 16697.165335521626 14544.03539222401 14582.414122956066 15878.815415397064 15931.544828393857 17411.177873897854 16570.882667185175 0.695561938094423 0.7275746640414432 0.8603886079883494 1.0076207568946538 0.8776862213275537 0.8800022555125073 0.9582359452005179 0.9614179973612764 1.0507091398563029 1.0 14.016362830971525 -3.224771341973647 0.4344139652552913 0.987747307300291 5.453651135234504e-13 0.7727683972431045 0.053383648767239084 6.116491986913336 0.45067243455093603 0.039655415983509176 3.7595888481072035 0.0005959758449408757 3.224771341973647 -0.9877473072997457 S(ph)RFTPELQPK ddPTM_KYSE-520_SHP099_60min_R1 3 SRFTPELQPK 10 1 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.61)RFT(0.39)PELQPK;S(0.58)RFT(0.42)PELQPK;S(0.665)RFT(0.335)PELQPK 98.531 0.0015529 2437300000.0 2575600.0 2392970.0 2115550.0 1904270.0 1967700.0 2216300.0 1914730.0 2334280.0 2812670.0 2281190.0 True False 2432726.333668691 2278008.1292788037 2251921.7379996795 2085251.2482603453 2122546.795318488 2202467.2496052603 2108289.5943640014 2326182.927505049 2301960.0296407 2260980.431338962 1.0759608088372619 1.0075311124783852 0.9959934667219044 0.9222774418376769 0.938772740311382 0.9741204386722401 0.932466979873622 1.0288381514772658 1.0181247027766047 1.0 21.108517075021574 -10.327428837920547 13.505337066771453 0.9999999999768439 0.9847722900082031 0.0008100441551326387 0.045699322077156726 3.41269269973737e-11 0.0 0.04730415364936929 0.011472942472164514 4.7051249605522095e-11 10.327428837920547 -0.015227709968640757 S(ph)RGPKSDDDGFEIVPIEDPAK ddPTM_KYSE-520_SHP099_60min_R1 3 SRGPKSDDDGFEIVPIEDPAK 21 2 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 S(0.5)RGPKS(0.5)DDDGFEIVPIEDPAK;S(0.598)RGPKS(0.402)DDDGFEIVPIEDPAK;S(0.5)RGPKS(0.5)DDDGFEIVPIEDPAK 162.03 3.3126e-09 3004750000.0 3112720.0 2791690.0 2972930.0 2644420.0 2781590.0 2747480.0 2576690.0 2775030.0 3607610.0 2677310.0 True False 2940051.2165465145 2657573.021987879 3164569.8246561876 2895744.8817261388 3000485.307917853 2730331.9581940393 2837166.971271029 2765404.0686268713 2952558.9644473414 2653591.1163156615 1.1079518613359636 1.001500572430973 1.192561207037046 1.0912551161034532 1.1307263162999397 1.0289196181757374 1.0691801588521486 1.0421364661736037 1.112665378736562 1.0 21.339514656720723 -6.2629255745327095 24.9951863259538 1.0543763434764142 1.1031834506520124 0.2143620434320972 0.05159732134000733 242.86719812738505 4084574.365520651 0.01737598022692336 0.01610244455426674 5.45851396160511e-07 6.2629255745327095 0.04880710717559822 S(ph)RGPT(ph)PPAMGPR ddPTM_KYSE-520_SHP099_60min_R1 1 SRGPTPPAMGPR 12 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 S(1)RGPT(1)PPAMGPR 72.898 0.031550999999999996 189780000.0 559300.0 488210.0 478930.0 506450.0 485710.0 470080.0 455190.0 515340.0 575420.0 525110.0 True False 528274.5140630913 464755.65878185 509802.59411509446 554582.8557302547 523932.6136881346 467146.0563526783 501205.04742629384 513552.4058212606 470938.23315776524 520457.93392939836 1.0150186588081742 0.892974491277321 0.9795269912904252 1.065567108456234 1.0066761971183775 0.8975673650044654 0.9630077951588759 0.9867318227699945 0.9048535961441398 1.0 18.989422036685887 -6.207946748141526 24.99748127261786 0.9503885447791662 0.989853277321337 0.14667426219512603 0.04994588624073519 735.3721969109524 343644.16605609236 0.017253109016102375 0.017253102686854982 6.195170336999392e-07 6.207946748141526 0.039464732542170755 S(ph)RGPTPPAMGPR ddPTM_KYSE-520_SHP099_60min_R1 3 SRGPTPPAMGPR 12 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 S(0.659)RGPT(0.341)PPAMGPR;S(0.584)RGPT(0.416)PPAMGPR;S(0.628)RGPT(0.372)PPAMGPR 62.376999999999995 0.022647 7543500000.0 452850.0 458200.0 390590.0 383322.0 332940.0 457670.0 411589.0 481690.0 510780.0 449950.0 True False 427729.507765906 436187.38422777853 415768.05636609613 419752.80763003835 359140.483830532 454813.5117659337 453196.43284154084 480019.1298172914 418035.22771597025 445963.79305580264 0.9591126329674593 0.9780780211751388 0.932291057794622 0.9412262030373292 0.8053130981097234 1.0198440296004563 1.0162179977351506 1.0763634566118856 0.9373748143353473 1.0 18.766567059696214 S(ph)RGQGYVGGQR ddPTM_KYSE-520_SHP099_60min_R1 3 SRGQGYVGGQR 11 1 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(1)RGQGYVGGQR;S(1)RGQGYVGGQR;S(1)RGQGYVGGQR 134.37 7.7662e-05 1954650000.0 720900.0 751390.0 727442.0 669442.0 656043.0 726390.0 615302.0 703430.0 873540.0 647865.0 True False 680910.2399214789 715292.0965406169 774334.075268353 733065.5664049231 707669.8517259372 721856.3305693107 677502.7309288299 700989.9655117955 714927.1561513926 642125.4201313432 1.060400692098753 1.1139445256571652 1.2058922618418801 1.1416236508048203 1.1020741891532455 1.124167192168874 1.0550940823838597 1.091671414236197 1.113376193711749 1.0 19.29249558693929 -6.550934138997975 1.6683783930518337 1.0717884467739003 1.13162156614916 0.2783699857119285 0.04459176720932239 0.5581692867535349 3.1473936991215403 0.022557480595049424 0.016459339149488772 2.8123272890742087e-07 6.550934138997975 0.0598331193752597 S(ph)RGQNRPTNVK ddPTM_KYSE-520_SHP099_60min_R1 7 SRGQNRPTNVK 11 2 Q5TBQ1;Q5TBP9;Q5TBQ0;Q9BX40-3;Q9BX40-2;Q9BX40 Q5TBQ1 LSM14B Protein LSM14 homolog B 1 S(1)RGQNRPTNVK;S(1)RGQNRPTNVK;S(1)RGQNRPTNVK;S(1)RGQNRPTNVK;S(1)RGQNRPTNVK;S(0.997)RGQNRPT(0.003)NVK;S(1)RGQNRPTNVK 99.069 0.0013223 22892900000.0 2458387.0 1855836.0 887912.0 2707100.0 852920.0 1585801.0 1548967.0 2376090.0 1072867.0 547181.0 True False 2322015.3724370124 1766678.852893372 945148.22822943 2964381.970080707 920039.9515490404 1575903.4277359862 1705551.7008211168 2367847.8983735736 878061.3975761579 542333.4020403768 4.281527495265981 3.2575512521388874 1.7427439001056837 5.465977125745997 1.6964471450359668 2.9057834568313385 3.14483986124487 4.3660373664340275 1.619043551941848 1.0 19.04882050238538 S(ph)RGWYSR ddPTM_KYSE-520_SHP099_60min_R1 3 SRGWYSR 7 1 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 1 S(1)RGWYSR;S(1)RGWYSR;S(1)RGWYSR 106.4 0.0045425 416790000.0 469116.0 504423.0 377641.0 417456.0 459225.0 468064.0 415421.0 456241.0 540490.0 407607.0 True False 443093.2003204386 480189.7619256406 401984.34310696356 457130.89272727707 495363.3948671718 465142.63895647536 457415.80879825656 454658.4064584501 442350.64064412215 403995.9190934471 1.0967764261449087 1.188600525973554 0.9950208012224543 1.131523540517595 1.2261594027453302 1.1513547958609072 1.132228785440907 1.1254034631802416 1.0949383885776414 1.0 18.62398119431145 -8.20849463738706 1.759814929629496 1.0000967472308113 1.1328679294978772 0.32524871023827695 0.056982431054926334 0.9585033062442297 5.324937639717217 0.05634413995651973 0.01595545899660007 6.1873596757897485e-09 8.20849463738706 0.13277118226706586 S(ph)RLSAIEIDIPVVSHTT ddPTM_KYSE-520_SHP099_60min_R1 4 SRLSAIEIDIPVVSHTT 17 1 P56749 P56749 CLDN12 Claudin-12 1 S(0.5)RLS(0.5)AIEIDIPVVSHTT;S(0.5)RLS(0.5)AIEIDIPVVSHTT;S(0.5)RLS(0.5)AIEIDIPVVSHTT;S(0.5)RLS(0.5)AIEIDIPVVSHTT 278.93 1.4438999999999998e-30 1356348000.0 372170.0 540961.0 392118.0 682793.0 458872.0 540635.0 416177.0 567300.0 798579.0 500504.0 True False 351524.9881974981 514972.42156098434 417394.5536909825 747685.4414307999 494982.6157754667 537260.6964266287 458248.2326561057 565332.1687088156 653577.1841383603 496069.9239462193 0.7086198360931233 1.0381045024144908 0.8414026602754368 1.5072178443776387 0.9978081554267529 1.0830342064536753 0.9237573385033236 1.1396219392048956 1.3175101988428892 1.0 18.920183965654566 -4.064204820040603 1.2254537069708136 1.1165699205130883 0.39365139511585057 0.3084483618533582 0.18043203857404275 2.8252773175403667 2.6715384972884753 0.05343057552068237 2.8931415114206493 8.625716496026332e-05 4.064204820040603 -0.7229185253972378 S(ph)RLTPVSPESSSTEEK ddPTM_KYSE-520_SHP099_60min_R1 2 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501;Q13501-2 E7EMC7 SQSTM1 Sequestosome-1 1 S(0.699)RLT(0.301)PVSPESSSTEEK;S(0.5)RLT(0.5)PVSPESSSTEEK 165.49 4.8028e-07 2048430000.0 1765250.0 1947310.0 1555510.0 1424900.0 1476620.0 1910810.0 1374320.0 1811570.0 2044730.0 2009100.0 True False 1667328.0635613678 1853758.3046280982 1655780.6635039994 1560322.0675881952 1592821.5931814758 1898883.9260110185 1513249.6776706534 1805286.0864936158 1673458.5754486788 1991300.9370561454 0.8373059202323656 0.9309282540531596 0.83150699760722 0.7835691926579962 0.7998899430722086 0.9535896311173577 0.7599301790656401 0.9065862687547739 0.8403845668463596 1.0 20.925279835380298 -10.30999871733024 6.064884463042733 1.0000098075911255 0.8499139213691189 0.3613865841778293 0.06009443426328609 7.76932423495865e-06 8.838936616821703e-07 0.05672598713325653 0.01375717393678198 4.8978026591090677e-11 10.30999871733024 -0.15009588622200654 S(ph)RMSMKLR ddPTM_KYSE-520_SHP099_60min_R1 1 SRMSMKLR 8 2 Q6GYQ0-2;H0YJB5 Q6GYQ0-2 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 S(1)RMSMKLR 42.743 0.067978 94169000.0 111780.0 78683.0 40053.0 16472.0 78132.0 134550.0 50471.0 42611.0 57498.0 217330.0 True False 105579.34057209441 74902.95057440923 42634.88046706587 18037.493927512613 84280.5438897313 133710.2235412117 55573.101229492095 42463.19238648218 47057.81260662684 215404.62528018173 0.49014425959872004 0.34773139377569656 0.19792927107117456 0.08373772802719918 0.39126617536696656 0.6207397977981751 0.2579940015550125 0.19713222188822238 0.21846240555613725 1.0 17.71668970295003 -10.156071297681507 4.575941231037973 1.000094034603793 0.30917477509376406 0.6549164645916132 0.1498824513434365 94911293.61254622 70217022.94240297 82017.168252431 0.03919510147246161 6.98117785385241e-11 10.156071297681507 -0.6909192595100289 S(ph)RNSPLLER ddPTM_KYSE-520_SHP099_60min_R1 1 SRNSPLLER 9 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 S(0.991)RNS(0.009)PLLER 66.538 0.056249 0.0 528430.0 553160.0 486670.0 483120.0 498620.0 491730.0 494440.0 497340.0 555910.0 451650.0 True False 499116.93450091133 526585.3632899128 518041.52689953195 529035.5795446757 537858.5572402823 488660.930672018 544422.8204693802 495614.8436200292 454970.7573506896 447648.7323783834 1.1149745289103679 1.1763360983781515 1.1572500700429722 1.181809622768011 1.2015192233039709 1.0916169204271715 1.2161830942239702 1.1071512276753228 1.0163566306407346 1.0 18.772007575392823 -7.66160015085388 3.049854011118524 1.0022960975342 1.1627973619252605 0.7485297734652372 0.0354651133850111 0.11692041448764606 2.0265652641034 0.02881884320278547 0.008840259241031347 2.1797156840070426e-08 7.66160015085388 0.1605012643910606 S(ph)RNVSAEQKDENK ddPTM_KYSE-520_SHP099_60min_R1 1 SRNVSAEQKDENK 13 2 P27448-8;P27448-3;P27448-2;P27448-6 P27448-8 MARK3 MAP/microtubule affinity-regulating kinase 3 1 S(0.5)RNVS(0.5)AEQKDENK 53.328 0.06429299999999999 0.0 70551.0 101570.0 80493.0 67193.0 85133.0 78740.0 60937.0 65164.0 109090.0 97658.0 True False 66637.39539006827 96690.42474032185 85681.70757335369 73579.00251768781 91832.4827594903 78248.55445287995 67097.10664780889 64937.961293391956 89282.00593510948 96792.8260967744 0.6884538666475505 0.9989420563425829 0.8852072103741273 0.7601699990051206 0.9487529857602804 0.8084127471869278 0.6932033018720267 0.6708964280934039 0.9224031318792622 1.0 16.562612504134655 -6.50559762281832 24.393723719657082 0.7880015073092437 0.8623031713198346 0.0 0.12370552650400542 1524.101330075001 2151401.017719915 0.042781606202376324 0.036870904022015163 3.1217805983766644e-07 6.50559762281832 0.0743016640105909 S(ph)RPETGRPR ddPTM_KYSE-520_SHP099_60min_R1 2 SRPETGRPR 9 2 P46783;F6U211;A0A2R8Y7H1;A0A2R8YFH6;A0A1W2PQS6;A0A2R8Y6L3;S4R435;Q9NQ39 P46783 RPS10;RPS10-NUDT3;RPS10P5 40S ribosomal protein S10;Putative 40S ribosomal protein S10-like 1 S(0.995)RPET(0.005)GRPR;S(0.997)RPET(0.003)GRPR 58.132 0.033431999999999996 761170000.0 252208.0 235250.0 224562.0 204915.0 278989.0 241284.0 223016.0 270454.0 246603.0 279424.0 True False 238217.51947581695 223948.2368825512 239037.62583190377 224390.05999005848 300943.8470697308 239778.05705624464 245560.63370641356 269515.8581984385 201826.1115557408 276948.52074858255 0.8601509003619987 0.8086276694211134 0.8631121234581542 0.810222995174481 1.0866418288001312 0.8657856572338158 0.8866652655976331 0.9731622955412297 0.7287495560915493 1.0 18.079258307163055 S(ph)RPTSFADELAAR ddPTM_KYSE-520_SHP099_60min_R1 4 SRPTSFADELAAR 13 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 S(1)RPTSFADELAAR;S(1)RPTSFADELAAR;S(1)RPTSFADELAAR;S(0.998)RPT(0.001)SFADELAAR 235.45 6.261400000000001e-16 3678880000.0 649582.0 631741.0 595237.0 590492.0 618760.0 729519.0 794470.0 850470.0 998980.0 833020.0 True False 613548.3915503863 601391.2140974269 633606.9294328733 646612.1821421068 667452.8917371897 724965.8013196664 874782.7808800013 847519.9180711907 817590.4142364608 825640.0908797539 0.7431184584273578 0.7283939100590664 0.767412988337011 0.783164709762476 0.8084065915767134 0.8780651634142247 1.0595207167664107 1.0265004418185688 0.9902503806050457 1.0 19.655153500320473 -6.439410805691125 1.889451276620058 1.0227217741608547 0.7576182842127135 0.9456016532816048 0.02848188444523085 0.07377394584580853 0.5237592365892658 0.013072037291552967 0.010549009571059165 3.635709661699235e-07 6.439410805691125 -0.26510348994814126 S(ph)RQPS(ph)PLLLLPPPAGLTSDPGPSVR ddPTM_KYSE-520_SHP099_60min_R1 3 SRQPSPLLLLPPPAGLTSDPGPSVR 25 1 I3L2J0 I3L2J0 CIC 2 S(1)RQPS(1)PLLLLPPPAGLTSDPGPSVR;S(1)RQPS(1)PLLLLPPPAGLTSDPGPSVR;S(1)RQPS(1)PLLLLPPPAGLTSDPGPSVR 65.57 0.017938 374094000.0 247103.0 190484.0 189067.0 157888.0 152198.0 154455.0 156124.0 186232.0 226068.0 182088.0 True False 233395.704002382 181332.86271768677 201254.56133789607 172893.62804924182 164175.11671183803 153490.98905282698 171906.5375434054 185586.00465887555 185019.74991051713 180474.84198232013 1.29323124175527 1.0047542401253395 1.115139146971031 0.9579929598507642 0.9096842247293455 0.8504841304577145 0.9525235520652009 1.028320638048023 1.0251830553127301 1.0 17.461438215277813 -1.0000049596812426 0.8467562812235179 0.9605863740629437 113.36980124274744 0.6716743677231685 0.06616701511106272 420.34500888629617 1.1762810948647162 0.024571635231075493 91001.97231143023 0.09999885799771138 1.0000049596812426 112.4092148686845 S(ph)RS(ph)AS(ph)LRR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSASLRR 8 2 Q16629;C9JAB2;Q16629-4;H7BZZ6;H7C1N1 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 3 S(1)RS(1)AS(1)LRR 60.301 0.032494999999999996 11958000000.0 937030.0 843720.0 818860.0 1002100.0 775840.0 868650.0 789520.0 972870.0 1074300.0 805980.0 True False 885051.0779770046 803186.4247504615 871645.0258223251 1097339.2827076477 836894.1940742476 863228.4331406428 869332.3865726573 969495.341039565 879234.2008991473 798839.6442429512 1.1079208253563264 1.005441368037799 1.0911389189358154 1.3736665307185403 1.047637282532917 1.0806028961653649 1.0882439208390953 1.2136294787401818 1.1006391673667935 1.0 19.607546406033766 -11.554762210257543 1.6320992458660168 2.8697206904266615e-05 1.1243272733913063 0.12529831756937915 0.0976246493509609 1659981.202324449 96396.58140419128 6115370.221562308 0.025522341007840153 2.787647074365547e-12 11.554762210257543 1.124298576184402 S(ph)RS(ph)AS(ph)PRR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSASPRR 8 2 Q16629;C9JAB2;Q16629-4;H7BZZ6;H7C1N1 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 3 S(1)RS(1)AS(1)PRR 60.301 0.032494999999999996 389910000.0 694220.0 562940.0 689900.0 633070.0 593540.0 641160.0 534190.0 545410.0 843920.0 340210.0 True False 655710.2327067398 535895.5174098328 734372.0578790286 693236.7824605644 640248.2212193605 637158.282613774 588191.1383919955 543518.1000096507 690685.401491956 337196.00407937495 1.944596687902587 1.5892700711948073 2.1778788864477754 2.0558867070600826 1.8987420179174126 1.8895783903292898 1.7443597530104094 1.6118758628044363 2.0483202444159767 1.0 18.363227914248753 -11.11688764315455 0.3562658219405056 7.685332736452682e-11 1.921842949956309 0.6793505200055185 0.18185240736634448 25.7479076909777 1.3240100831655712 21.059100084882363 0.14292128046980324 7.640334220124344e-12 11.11688764315455 1.9218429498794556 S(ph)RS(ph)FDYNYR ddPTM_KYSE-520_SHP099_60min_R1 8 SRSFDYNYR 9 1 O75494;O75494-2;O75494-4;Q5JRI1;O75494-3;O75494-6 O75494;O75494-3 SRSF10 Serine/arginine-rich splicing factor 10 2 S(1)RS(0.996)FDY(0.003)NY(0.001)R;S(1)RS(1)FDYNYR;S(1)RS(0.99)FDY(0.01)NYR;S(1)RS(0.937)FDY(0.063)NY(0.001)R;S(0.997)RS(0.976)FDY(0.023)NY(0.004)R;S(1)RS(0.999)FDY(0.001)NYR;S(0.981)RS(0.735)FDY(0.272)NY(0.012)R;S(1)RS(1)FDYNYR 116.01 0.00079257 35700200000.0 17282270.0 15917860.0 13842220.0 15170700.0 15087180.0 14973410.0 14800730.0 16176220.0 18071910.0 14972050.0 True False 16323588.031748896 15153142.112405047 14734511.649535093 16612518.766762735 16274455.231688363 14879955.394085564 16296932.229604742 16120108.468378127 14790506.699777825 14839409.285078632 1.1000160261205707 1.02114186766463 0.9929311447963758 1.11948652723441 1.0967050587419747 1.0027323263499244 1.098219741535917 1.0863039194280644 0.9967045463629082 1.0 23.822930327703293 -7.773788625566422 24.845537024762493 0.9983521976323103 1.0627942159267223 0.2827890404733786 0.04217313159664231 327.26772399794646 658409.1250650085 0.04052636881486812 0.010769581947047066 1.6834932306895005e-08 7.773788625566422 0.06444201829441198 S(ph)RS(ph)FDYNYRR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSFDYNYRR 10 2 O75494;O75494-2;O75494-4;Q5JRI1;O75494-3;O75494-6 O75494;O75494-3 SRSF10 Serine/arginine-rich splicing factor 10 2 S(1)RS(1)FDYNYRR 79.875 0.0086102 3463300000.0 2517200.0 3002400.0 2718700.0 1771500.0 1984200.0 1926500.0 1333600.0 1484900.0 3306100.0 1429300.0 True False 2377565.8980862033 2858160.1973057245 2893951.7520738 1939862.8273791033 2140345.2514463323 1914475.9989011078 1468413.3026817504 1479749.2284782652 2705795.5799987665 1416637.5139785726 1.6783163474253198 2.017566363380206 2.0428315101908088 1.3693431158201312 1.5108630332930082 1.3514226328260748 1.0365483676609464 1.0445503623029477 1.9100126555308017 1.0 20.434039221238326 -5.309754551759377 6.177433288118125 1.3143701007748771 1.9230957861308953 0.5051562884283908 0.2700543676645726 0.16955144536482614 16.12720614623877 0.07642041788138713 0.11550990774185667 4.90055703675527e-06 5.309754551759377 0.6087256853560181 S(ph)RS(ph)FSK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSFSK 6 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 S(0.991)RS(0.855)FS(0.154)K 50.452 0.060724 238920000.0 341580.0 290280.0 237100.0 327780.0 339410.0 320450.0 359960.0 377900.0 344740.0 330750.0 True False 322631.8764771516 276334.5130808371 252383.84537341306 358932.11264934915 366119.6360212678 318449.9526851083 396348.26967105793 376589.1531025235 282143.9061881898 327819.81231960596 0.9841744286114213 0.842946346425903 0.7698858820874223 1.0949067114327136 1.1168319371262456 0.971417652983821 1.2090430619996835 1.1487687410892973 0.860667646021087 1.0 18.322543523113026 -5.273311522189992 24.92778638362535 1.0687903677087172 0.8633966309977729 0.40866359906055805 0.1050408515118924 636.9165629587826 1337324.1749772623 0.029515532826806388 0.044176810798123814 5.329524681551521e-06 5.273311522189992 -0.2053937367109443 S(ph)RS(ph)GS(ph)IKGSR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSGSIKGSR 10 2 Q16629;C9JAB2;Q16629-4;H7BZZ6;H7C1N1 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 3 S(1)RS(0.996)GS(0.966)IKGS(0.037)R;S(1)RS(1)GS(1)IKGS(0.001)R 81.904 0.048951999999999996 2401900000.0 4929800.0 5243600.0 5292400.0 4322500.0 3817700.0 4291300.0 3398300.0 3439000.0 6853400.0 3514900.0 True False 4656334.166687343 4991689.585195932 5633556.572139398 4733309.10039299 4118131.2702583675 4264516.404923093 3741833.328211903 3427070.911668634 5608995.320154719 3483760.720550817 1.3365826588546905 1.4328451307662418 1.6170905593219609 1.3586780149598239 1.1820936053286835 1.2241128903505263 1.0740787408672208 0.9837274102817201 1.6100403472222058 1.0 21.73221410625475 -5.644658386938465 3.5929411154458113 1.1742562496384412 1.4632524558182352 0.34756135160641854 0.17633156338220818 0.2579564689592635 6.403728484979171 0.05296240202968533 0.06974145029755993 2.2664263620609166e-06 5.644658386938465 0.28899620617979394 S(ph)RS(ph)HDRLPYQR ddPTM_KYSE-520_SHP099_60min_R1 3 SRSHDRLPYQR 11 2 H3BUL5;H3BVF8;P49761-3;P49761-1;P49761;H3BRT8;H3BQR7;H3BV35;H3BRK0;P49761-2 H3BUL5 CLK3 Dual specificity protein kinase CLK3 2 S(1)RS(1)HDRLPYQR;S(1)RS(1)HDRLPYQR;S(1)RS(1)HDRLPYQR 124.2 0.00011456 2889250000.0 746319.0 746838.0 713267.0 732445.0 639574.0 681447.0 636105.0 721499.0 847197.0 582709.0 True False 704919.1973199577 710958.7814533068 759245.3320875504 802056.3525823803 689904.8351217296 677193.8365030693 700408.7011865447 718996.2883681322 693367.3808984035 577546.6516007421 1.2205407050083084 1.2309980145894646 1.3146043353956047 1.3887299845984418 1.1945439094999042 1.1725353001807606 1.2127309529806383 1.2449146512672957 1.2005391754530128 1.0 19.139577960038597 -5.961773210540997 24.973856506065218 1.1842713455240987 1.2870935756427244 0.3599822551774432 0.07583446690515117 205.2027554467415 134059.74110123471 0.02343485497179225 0.026572578781199768 1.0920104376464434e-06 5.961773210540997 0.10282223011862568 S(ph)RS(ph)HS(ph)DNDRPNCSWNTQYSSAYYTSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSHSDNDRPNCSWNTQYSSAYYTSR 26 2 O75494-3;O75494-6 O75494-3 SRSF10 Serine/arginine-rich splicing factor 10 3 S(0.878)RS(0.909)HS(0.921)DNDRPNCS(0.289)WNT(0.003)QYSSAYYTSR 87.54899999999999 0.018972 393410000.0 40960.0 47885.0 38498.0 36999.0 31938.0 44168.0 45728.0 55218.0 52950.0 47747.0 True False 38687.86714826432 45584.53272314967 40979.64267897791 40515.37383584504 34451.338897637776 43892.331128712256 50350.63250227286 55026.46164597811 43335.614760876764 47323.998726603866 0.8175105272014002 0.9632434694814509 0.8659378704602283 0.8561274390591331 0.7279887546415316 0.9274856797770462 1.06395557977157 1.1627601877827833 0.9157217464067555 1.0 15.530284361496504 -6.604698873083814 4.38298997781801 1.0477629072594719 0.8519711577803021 0.5553996030510695 0.0792772367870845 0.15996108613501225 5.746607526056017 0.03155375321172256 0.02415347313987752 2.484855433198233e-07 6.604698873083814 -0.19579174947916977 S(ph)RS(ph)HS(ph)PMSNR ddPTM_KYSE-520_SHP099_60min_R1 3 SRSHSPMSNR 10 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 3 S(1)RS(0.983)HS(0.932)PMS(0.085)NR;S(1)RS(0.999)HS(0.996)PMS(0.006)NR;S(1)RS(0.999)HS(0.973)PMS(0.028)NR 134.04 0.00074506 762120000.0 926190.0 892390.0 727730.0 1056810.0 709800.0 777300.0 765340.0 841320.0 1035980.0 720400.0 True False 874812.3943860088 849518.2448953008 774640.6402091685 1157248.9046584866 765657.2217904468 772448.5823752058 842708.0361985993 838401.6572855635 847872.146930558 714017.8164627188 1.225196870744591 1.1897717750291696 1.0849037970043638 1.6207563424559315 1.0723222924373965 1.0818337645998193 1.1802339056095525 1.1742027130906183 1.1874663732215542 1.0 19.445600547853264 S(ph)RS(ph)IDKDR ddPTM_KYSE-520_SHP099_60min_R1 4 SRSIDKDR 8 2 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 2 S(1)RS(1)IDKDR;S(1)RS(1)IDKDR;S(1)RS(1)IDKDR;S(1)RS(1)IDKDR 81.565 0.0072467 7810090000.0 5283460.0 4565320.0 4771550.0 4859760.0 4592850.0 4657080.0 4329040.0 4771350.0 5814070.0 4410640.0 True False 4990375.941483612 4345995.174514979 5079131.747749936 5321630.129259881 4954281.165258175 4628013.436263886 4766661.61055894 4754799.300491462 4758381.448777535 4371565.161026001 1.1415535986914986 0.9941508394432761 1.1618565801173761 1.2173283328140763 1.1332968817272326 1.0586628051491054 1.0903787167706795 1.0876652012149162 1.0884846212976838 1.0 22.059718472797154 -6.255739898046303 24.158282349442004 1.0721011216801541 1.1287719171230803 0.2332222014865577 0.0578510207500356 566.0541554284404 2399321.995385394 0.020591924646793353 0.020075729704775558 5.549579816029715e-07 6.255739898046303 0.05667079544292619 S(ph)RS(ph)IS(ph)RPR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSISRPR 8 2 Q16629;C9JAB2;Q16629-4;H7BZZ6 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 3 S(1)RS(1)IS(1)RPR 55.531000000000006 0.039596 319130000.0 635400.0 551940.0 482040.0 544870.0 480030.0 533830.0 510010.0 592340.0 616520.0 523200.0 True False 600153.0953615024 525423.9739211699 513113.0696912698 596654.2809788609 517805.6300029141 530498.1689558153 561566.7880179358 590285.3107931956 504575.5092044522 518564.8550434403 1.157334689238104 1.0132271186738155 0.9894867820309307 1.1505875787299142 0.9985359111147967 1.023012191814224 1.082924888866395 1.1383056623529708 0.973022958067962 1.0 18.98416490744507 -4.250227449872417 24.060505945058157 1.0465675722975962 1.1573347992794716 0.2517639370768877 0.05947011297268665 1469.5413341221417 3153495.6424199897 0.014516402484438027 0.2077477187857186 5.620468913888394e-05 4.250227449872417 0.11076722698187536 S(ph)RS(ph)KDEYEK ddPTM_KYSE-520_SHP099_60min_R1 3 SRSKDEYEK 9 2 Q13247;Q13247-3;A0A590UJP7 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 S(1)RS(1)KDEYEK;S(0.981)RS(0.989)KDEY(0.03)EK;S(0.941)RS(0.75)KDEY(0.309)EK 119.69 0.0012186 1027300000.0 5647540.0 4850470.0 3807410.0 6074010.0 4946750.0 5752370.0 5828490.0 6028930.0 5383520.0 5526160.0 True False 5334259.698108125 4617446.140496103 4052841.7406713916 6651282.084182302 5336031.081842628 5716467.3250966845 6417690.649780705 6008017.048992839 4406008.475495278 5477202.521687422 0.9739022205198176 0.8430300180088203 0.7399473955224113 1.2143575224480048 0.9742256308241636 1.04368376054416 1.1717095769910542 1.0969134380559444 0.8044267959874287 1.0 22.385007794885507 -5.251975218081334 24.99941324545237 1.0501034430813319 0.8513668977615079 0.3533642983190476 0.1183737311663242 733.637373239878 1937885.7422328158 0.03206071341148902 0.05460962518453668 5.597895435614268e-06 5.251975218081334 -0.198736545319824 S(ph)RS(ph)KDEYEKS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SRSKDEYEKSR 11 3 Q13247;Q13247-3;A0A590UJP7 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 3 S(0.998)RS(0.98)KDEY(0.023)EKS(0.999)R 45.577 0.055615 3620300000.0 1606500.0 1419100.0 1123600.0 1663700.0 1076200.0 1421600.0 1558200.0 1513800.0 1421100.0 1377300.0 True False 1517384.2425216476 1350924.3058874728 1196029.0538235651 1821817.5477903557 1160890.8172596202 1412727.2670842553 1715718.062566516 1508548.981123576 1163064.063015711 1365098.1935231865 1.1115568460356875 0.9896169464563335 0.8761487338406988 1.3345688657666601 0.8504082876730451 1.034890584272288 1.2568458962929352 1.105084592654948 0.8520002945824396 1.0 20.38057329938051 -3.4303397846515415 14.263558966621966 1.046692418027411 1.1180451252755423 0.0 0.15676386037988382 5513884.658496587 331517.78433377325 0.035949912374092334 4229368.19425295 0.0003712446599057605 3.4303397846515415 0.07135270724813125 S(ph)RS(ph)KS(ph)PFRK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSKSPFRK 9 3 Q5QP22;Q5QP23;G3XAC6;Q14498-2;Q14498;Q14498-3 Q5QP22;Q14498-3 RBM39 RNA-binding protein 39 3 S(1)RS(1)KS(1)PFRK 42.785 0.058357000000000006 453870000.0 286790.0 280090.0 210700.0 252280.0 220730.0 298960.0 270610.0 285210.0 340850.0 238620.0 True False 270881.1869983091 266634.0559763391 224282.0591319196 276256.6153492519 238100.1952180973 297094.07974641863 297965.8996990918 284220.6730785141 278960.23212926975 236506.0124435506 1.145345880215046 1.1273880660432658 0.9483144078015834 1.1680743863337892 1.0067405591852647 1.2561798183347632 1.259866066915362 1.2017481929612766 1.1795058791406081 1.0 17.851517334585992 -6.265504950073146 24.997879606309386 1.197094632508591 1.079520375537956 0.2200919092900202 0.09142574505347353 461.54961718974147 2837905.9630475943 0.030401660065903034 0.02779556092387944 5.426190665408363e-07 6.265504950073146 -0.11757425697063484 S(ph)RS(ph)KS(ph)PPKS(ph)PEEEGAVS(ph)S ddPTM_KYSE-520_SHP099_60min_R1 4 SRSKSPPKSPEEEGAVSS 18 3 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 5 S(1)RS(1)KS(1)PPKS(0.998)PEEEGAVS(0.537)S(0.465);S(1)RS(1)KS(1)PPKS(1)PEEEGAVS(0.5)S(0.5);S(1)RS(1)KS(1)PPKS(0.983)PEEEGAVS(0.509)S(0.509);S(1)RS(1)KS(1)PPKS(0.999)PEEEGAVS(0.637)S(0.365) 50.827 0.030483 4145080000.0 3438600.0 3060990.0 2471830.0 2753750.0 2673890.0 2951680.0 2728220.0 3116070.0 3219980.0 2785670.0 True False 3247854.0033208407 2913935.4457603423 2631168.116867833 3015465.572054871 2884309.930647026 2933257.470249895 3004015.1024613106 3105261.0804662076 2635312.801090233 2760991.1310184686 1.1763362681004987 1.0553947142472189 0.9529795613277661 1.0921677864798256 1.0446646851716135 1.0623929346588958 1.0880205549060187 1.1246907118172254 0.95448071943575 1.0 21.396754822966845 -13.999999999965379 0.1362934205346639 0.782374498837103 1.0851209190578093 0.12121045926643781 0.06340703472869112 382.77108323827434 3.2276138400931913 22.426833911264715 0.4294767263556433 1.0000000000797182e-14 13.999999999965379 0.3027464202207063 S(ph)RS(ph)KS(ph)PPKS(ph)PEEEGAVSS ddPTM_KYSE-520_SHP099_60min_R1 3 SRSKSPPKSPEEEGAVSS 18 3 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 4 S(1)RS(0.999)KS(0.996)PPKS(0.996)PEEEGAVS(0.005)S(0.004);S(1)RS(0.999)KS(0.999)PPKS(0.986)PEEEGAVS(0.008)S(0.007);S(1)RS(1)KS(1)PPKS(1)PEEEGAVSS 91.72200000000001 0.00054459 3733620000.0 4098690.0 3826300.0 2902260.0 3306640.0 3440830.0 3445400.0 3302010.0 3605590.0 4042400.0 3319800.0 True False 3871327.495164055 3642478.8046066095 3089344.3233801858 3620902.0714224335 3711603.74535535 3423895.9805937596 3635809.3953120615 3593083.049841028 3308402.0606113 3290389.154765315 1.176556119374936 1.1070054736022272 0.9388993757489246 1.1004479716870124 1.1280136089617272 1.0405747829660492 1.1049785372792427 1.0919933420754613 1.005474399835016 1.0 21.649826791110968 -8.362326856569148 0.010568418122314356 2.8685762428788805e-07 2.0913384705833615 0.18650975844511586 0.06106357990499922 3994.473257778611 20.013498921157233 2023.8999079510227 1933.9555374164784 4.341833282603668e-09 8.362326856569148 2.091338183725737 S(ph)RS(ph)LSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSLSSPR 8 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)RS(0.986)LS(0.391)S(0.623)PR 66.023 0.016324 0.0 272160.0 251030.0 250220.0 233930.0 228550.0 256300.0 226390.0 270240.0 310490.0 217110.0 True False 257062.74226249047 238970.14199628783 266349.5815661554 256162.63686638104 246535.58472838352 254700.33663034244 249275.71055348072 269302.60051449004 254112.84281595156 215186.574309024 1.1946039992872843 1.1105253325568019 1.2377611494649174 1.1904210924354062 1.1456829289653545 1.1836255930380384 1.1584166500810695 1.251484212615195 1.1808954328676031 1.0 17.715228544050635 -9.811918574507999 6.03452450813893 0.9999999875814315 1.1834754745028302 0.6675253900820491 0.03889579948788959 6.442676552596813e-09 1.2405267361827724e-09 0.03721305054035386 0.009025489867107354 1.5419895321158166e-10 9.811918574507999 0.1834754869213987 S(ph)RS(ph)NSKS(ph)KPNLPSESR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSNSKSKPNLPSESR 16 3 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 3 S(0.956)RS(0.758)NS(0.601)KS(0.683)KPNLPS(0.001)ESR 44.5 0.064716 861490000.0 454330.0 388490.0 343360.0 298620.0 399620.0 383570.0 301760.0 359560.0 488020.0 338220.0 True False 429127.4092155989 369826.3572646216 365493.5349954243 327000.7550166231 431067.82047322986 381175.9973519332 332264.8456937952 358312.77028193465 399407.86998306063 335223.6339311779 1.2801227770942296 1.1032228036181593 1.0902976341771324 0.9754704678243451 1.2859111853722371 1.13707972460614 0.991173688433942 1.0688768153963064 1.191466918066582 1.0 18.354764339921992 -1.000000190613129 0.014326308167860558 0.01872405295616127 2.4128937209871237 0.15165304652493372 0.09818835691983735 13638.610316813372 15.121007099322252 1020.5398272865069 1559.1391536232604 0.09999995610971468 1.000000190613129 2.3941696680309623 S(ph)RS(ph)PAYSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPAYSR 8 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 S(0.997)RS(0.98)PAY(0.003)S(0.02)R 77.64399999999999 0.045658 483380000.0 490820.0 431130.0 425150.0 447510.0 449350.0 445190.0 391450.0 426500.0 516710.0 443850.0 True False 463593.2361745876 410417.86766067654 452555.84926405165 490041.21585121256 484711.2885482352 442411.4040751542 431021.5861838413 425020.57104584796 422888.48919910553 439917.83431007434 1.0538177814537653 0.932942098845202 1.0287281259551515 1.1139380530451715 1.1018223194074654 1.0056682625040436 0.9797774779006514 0.9661362597686228 0.9612897141629276 1.0 18.746874563862065 -6.5248283250392465 5.443521720089629 0.9758082833321738 1.0438769562419365 0.3296842779782595 0.04673018934912967 0.236087131961261 23.440484031976855 0.019883857964716582 0.01606972573071017 2.986562962616421e-07 6.5248283250392465 0.0680686729097627 S(ph)RS(ph)PESQVIGENTK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPESQVIGENTK 14 1 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 S(0.823)RS(0.788)PES(0.389)QVIGENTK 106.38 0.0018448 3353600000.0 3913100.0 3396000.0 3143200.0 3598700.0 3561300.0 3371800.0 3588900.0 3931700.0 4032400.0 3791200.0 True False 3696032.5424285466 3232851.0625000806 3345815.701297817 3940719.366011394 3841554.048974808 3350755.345494298 3951701.0362886414 3918061.8503656797 3300217.8085318073 3757612.9175089723 0.9836118364418309 0.8603470164359635 0.8904098891367056 1.0487294600381054 1.022338951166232 0.8917244588661911 1.0516519724198563 1.042699696956299 0.8782750860670382 1.0 21.84138502757959 -5.243538296070422 24.84185339156089 0.9922780830278088 0.9063453153173877 0.23944746141591733 0.06454862853167137 1040.4294707894237 1443831.7556711256 0.017340220329692357 0.029953745672195897 5.70770743410907e-06 5.243538296070422 -0.08593276771042113 S(ph)RS(ph)PGRPPK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPGRPPK 9 2 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 2 S(1)RS(1)PGRPPK;S(1)RS(1)PGRPPK 89.53299999999999 0.021753 4668720000.0 6890300.0 7232700.0 5506600.0 9192400.0 7390800.0 7057300.0 7977200.0 8795500.0 10363900.0 6126900.0 True False 6508081.323527485 6885230.235495972 5861564.246871517 10066042.932204168 7972413.912100357 7013252.772927485 8783613.225969454 8764990.463385139 8482077.012658179 6072620.432656071 1.071708893335352 1.1338153457558484 0.9652446274017753 1.6576110830298405 1.312845747649231 1.154897272224208 1.4464288231707636 1.4433621466361708 1.3967737827059032 1.0 22.533887766103433 -5.2324374391840225 24.954546890100275 1.358053835188041 1.0646121716374402 0.37064247962768837 0.1710420382883056 723.0836353892703 622172.1252544647 0.04502377853345157 0.07796611526361275 5.855480793845992e-06 5.2324374391840225 -0.29344166355060075 S(ph)RS(ph)PHEAGFCVYLK ddPTM_KYSE-520_SHP099_60min_R1 11 SRSPHEAGFCVYLK 14 1 Q9NTZ6 Q9NTZ6 RBM12 RNA-binding protein 12 2 S(1)RS(1)PHEAGFCVYLK;S(1)RS(1)PHEAGFCVYLK;S(1)RS(1)PHEAGFCVYLK;S(1)RS(1)PHEAGFCVYLK;S(1)RS(1)PHEAGFCVYLK;S(1)RS(1)PHEAGFCVYLK;S(1)RS(1)PHEAGFCVYLK;S(1)RS(1)PHEAGFCVYLK;S(1)RS(1)PHEAGFCVYLK;S(0.999)RS(0.999)PHEAGFCVY(0.002)LK;S(1)RS(1)PHEAGFCVYLK 164.59 2.2804999999999998e-08 26400300000.0 19860050.0 20164230.0 17435990.0 18409290.0 16088700.0 16757000.0 16077680.0 18748780.0 21318770.0 17359330.0 True False 18758373.436471835 19195510.123673733 18559941.813970365 20158903.38664513 17354789.157819055 16652413.34730645 17702968.797435757 18683744.858178142 17447818.770457707 17205539.841554374 1.0902519542669098 1.1156586948416019 1.0787189466235099 1.1716518965570537 1.0086744919159245 0.9678518372953329 1.0289109763751791 1.0859144804659744 1.0140814488318575 1.0 24.036369823041152 -5.782005429340284 24.996261935844263 1.019948826025142 1.111658730782103 0.6340844419037965 0.03586620478681372 168.8928669593857 205273.82754136063 0.011647573527339427 0.01322117969753246 1.6519411463279447e-06 5.782005429340284 0.09170990475696117 S(ph)RS(ph)PHYRH ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPHYRH 8 2 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-4;K7EP11 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 2 S(0.999)RS(0.899)PHY(0.101)RH 58.596000000000004 0.046273 233520000.0 202230.0 180090.0 175850.0 177060.0 152860.0 178990.0 152820.0 149710.0 236130.0 142980.0 True False 191011.89876448942 171438.20607939907 187185.57236994835 193887.72916496973 164889.21234557327 177872.85701703062 168268.53697947288 149190.69095257684 193254.74435289568 141713.3084367568 1.3478755162203653 1.2097537483990628 1.320875042963835 1.3681688142331183 1.1635407723132742 1.2551598645120259 1.187386977522771 1.0527641517815316 1.3637021567324465 1.0 17.112615723971054 -13.999999999975136 0.09358630818697598 0.20755349483049532 1.4352751879832872 0.42756300100715017 0.09285290046023877 190.80294123067273 1.2294701547605962 29.9008851480089 1.8894881125930307 1.0000000000572506e-14 13.999999999975136 1.227721693152792 S(ph)RS(ph)PIIHSPK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPIIHSPK 10 1 E9PQ01;E9PKN0;O94913 E9PQ01 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 2 S(0.95)RS(0.676)PIIHS(0.375)PK 95.50200000000001 0.009271799999999998 675880000.0 492170.0 485850.0 422660.0 477570.0 457080.0 472250.0 391270.0 441760.0 509930.0 436400.0 True False 464868.3489834294 462509.0367242822 449905.33987991087 522958.1092133439 493049.5955705519 469302.5125777574 430823.39002721093 440227.6376675592 417339.5662892144 432533.83551406296 1.074756032510005 1.0693014019922717 1.04016218602922 1.2090571101606709 1.1399098870139637 1.0850076318769264 0.9960455221154684 1.0177877463490277 0.9648714898643934 1.0 18.722453468270597 -6.707442601319964 4.018247501431322 0.9951522685024689 1.107006834715613 0.588239953059696 0.04466393046663797 0.17429632768599196 5.750173822937626 0.02003688385575895 0.014671110705935504 1.961360382218198e-07 6.707442601319964 0.11185456621314416 S(ph)RS(ph)PKENGKGDIK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPKENGKGDIK 13 3 Q13247;Q13247-3 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 S(1)RS(1)PKENGKGDIK 65.423 0.045564 515700000.0 1299100.0 1687000.0 1738700.0 969560.0 1065500.0 943890.0 730360.0 755610.0 1987500.0 876630.0 True False 1227036.3333083554 1605953.987761376 1850779.3840183606 1061706.690891157 1149348.7881342934 937998.8323917824 804191.9164266965 752988.9652706989 1626620.1007977813 868863.7402078204 1.4122310283254138 1.8483381380114372 2.1301146524720656 1.2219484388164374 1.322818222175303 1.0795695446646512 0.9255673579315724 0.8666364245912646 1.8721233555087886 1.0 19.72877041817372 -5.360714902217457 6.861796090700992 1.1651061875482274 1.8000444344979147 0.4484169945062326 0.3112857826062799 0.22134023330827624 13.134114693410906 0.08817839758406867 0.13130266524248302 4.35797864500206e-06 5.360714902217457 0.6349382469496874 S(ph)RS(ph)PLAIR ddPTM_KYSE-520_SHP099_60min_R1 7 SRSPLAIR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RS(1)PLAIR;S(1)RS(1)PLAIR;S(1)RS(1)PLAIR;S(1)RS(1)PLAIR;S(1)RS(1)PLAIR;S(1)RS(1)PLAIR;S(1)RS(1)PLAIR 87.719 0.0031599 39026170000.0 18472937.0 17215653.0 16192011.0 15795940.0 16801382.0 16528724.0 15131790.0 16456909.0 19909062.0 16137493.0 True False 17448206.35972305 16388587.188658005 17235773.937193617 17297181.388377484 18123555.17661317 16425562.102497134 16661459.00523899 16399823.823750444 16294078.207410978 15994527.366799574 1.0908860236746307 1.0246371657518556 1.077604454444246 1.0814437333285556 1.1331097669214594 1.0269488885674907 1.0416974895940838 1.0253396957381908 1.0187283333693993 1.0 23.93107502611503 -6.46514215626425 24.97323913337443 1.0250915569674857 1.0783394126175454 0.5519668505843834 0.026452245397597458 238.04551497899504 102963.55829404437 0.009672573920787053 0.00853039289827217 3.42655607791759e-07 6.46514215626425 0.05324785565005974 S(ph)RS(ph)PLGFYVHLK ddPTM_KYSE-520_SHP099_60min_R1 13 SRSPLGFYVHLK 12 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 2 S(1)RS(1)PLGFYVHLK;S(1)RS(1)PLGFYVHLK;S(1)RS(1)PLGFYVHLK;S(0.999)RS(0.999)PLGFY(0.002)VHLK;S(0.999)RS(0.996)PLGFY(0.005)VHLK;S(1)RS(1)PLGFYVHLK;S(1)RS(0.999)PLGFY(0.001)VHLK;S(1)RS(1)PLGFYVHLK;S(0.993)RS(0.995)PLGFY(0.012)VHLK;S(1)RS(1)PLGFYVHLK;S(1)RS(1)PLGFYVHLK;S(1)RS(1)PLGFYVHLK;S(1)RS(1)PLGFYVHLK 115.53 0.00010094 13536310000.0 9380300.0 9082070.0 8682200.0 8777760.0 8264670.0 8788510.0 7734890.0 8495500.0 9833990.0 7371310.0 True False 8859956.059835535 8645753.724735001 9241868.504011163 9611995.671270229 8915052.5094602 8733657.64915775 8516808.166451752 8466031.093364606 8048385.310714155 7306005.928192407 1.212694890603188 1.1833762263144048 1.2649686565882259 1.3156293282187839 1.220236145040453 1.1954079609292845 1.165726971776344 1.1587769263498535 1.1016122064255458 1.0 22.800651493646924 -7.773501150939769 0.6713944464648599 1.0009074133277036 1.241437641281473 0.8195059829318977 0.0349605860211678 0.3123208923135776 0.3246441370941918 0.038583321231880706 0.01669603443147512 1.6846079623266575e-08 7.773501150939769 0.24053022795376933 S(ph)RS(ph)PLLNDR ddPTM_KYSE-520_SHP099_60min_R1 5 SRSPLLNDR 9 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 S(1)RS(1)PLLNDR;S(1)RS(1)PLLNDR;S(1)RS(1)PLLNDR;S(1)RS(1)PLLNDR;S(1)RS(1)PLLNDR 97.084 0.0020997 5317200000.0 4964570.0 4173131.0 3972836.0 4097287.0 4197941.0 4384990.0 4486837.0 4584610.0 4818090.0 4135450.0 True False 4689175.405475069 3972647.522762668 4228931.365322349 4486691.924585746 4528295.0736830225 4357621.650880545 4940410.271269252 4568707.057966013 3943246.3101649256 4098813.1303314106 1.1440324934003332 0.9692189900937148 1.031745344531093 1.0946319780679958 1.1047820258438779 1.0631423078632054 1.2053270335039141 1.114641461489758 0.9620458861578043 1.0 21.96677478664752 -3.9285614835891898 20.258436792310786 1.0695331200519995 3.230413252009352 0.09938058757799806 0.07089938701871067 928.4667478677774 307491.9953951625 0.0176399086775263 15168.539705382716 0.00011787956279234743 3.9285614835891898 2.1608801319573523 S(ph)RS(ph)PLLNDRR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPLLNDRR 10 2 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 S(1)RS(1)PLLNDRR 81.494 0.011386 3371000000.0 2956300.0 2676800.0 2495500.0 2329200.0 2522200.0 2564800.0 2319200.0 2359800.0 3515900.0 2436900.0 True False 2792308.1457620566 2548202.510041285 2656363.9229411753 2550566.4677004856 2720682.790645063 2548792.1318357494 2553647.3692107936 2351614.4045814592 2877501.1886263723 2415310.9618795123 1.1560863962581356 1.0550204715911036 1.09980203993033 1.0559992100212727 1.1264316825390965 1.0552645899691386 1.0572747813903154 0.9736280096834875 1.1913584768344692 1.0 21.203777511710687 -6.373366323493521 9.927861688904391 1.05380599873294 1.093917185581114 0.1113581194582357 0.06013686115249571 1.0057079787603598 83.03188207621956 0.020008026659172406 0.017634803033520875 4.232857776777122e-07 6.373366323493521 0.04011118684817405 S(ph)RS(ph)PMHYMYRPR ddPTM_KYSE-520_SHP099_60min_R1 4 SRSPMHYMYRPR 12 2 Q14966;Q14966-3;Q14966-2;Q14966-6;Q14966-4;A0A096LPB4;A0A096LNQ0 Q14966 ZNF638 Zinc finger protein 638 2 S(0.974)RS(0.582)PMHY(0.099)MY(0.345)RPR;S(0.987)RS(0.997)PMHY(0.012)MY(0.004)RPR;S(0.999)RS(0.989)PMHY(0.011)MY(0.001)RPR;S(1)RS(1)PMHYMYRPR 86.54799999999999 0.0018835999999999998 8137880000.0 756342.0 775231.0 644077.0 803772.0 704568.0 667512.0 747108.0 815965.0 920681.0 678858.0 True False 714386.2015296026 737987.7391145453 685595.2339796361 880162.2492171372 760013.4931564557 663345.8100069957 822632.9677114259 813134.6078626629 753508.5388792969 672843.8462635316 1.0617414508533682 1.0968187391662625 1.0189514815167235 1.3081226113679958 1.129554052365937 0.9858837435917994 1.2226209279905143 1.2085041906501792 1.1198862010312145 1.0 19.35991219716101 S(ph)RS(ph)PPPVSK ddPTM_KYSE-520_SHP099_60min_R1 5 SRSPPPVSK 9 1 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 2 S(1)RS(1)PPPVSK;S(1)RS(1)PPPVSK;S(1)RS(1)PPPVSK;S(1)RS(1)PPPVSK;S(1)RS(1)PPPVSK 86.49799999999999 0.0031069 47839100000.0 17753120.0 15300520.0 13941680.0 15185630.0 14854810.0 14916640.0 14721170.0 16179530.0 17322760.0 14283950.0 True False 16768319.043632666 14565460.052651277 14840383.000276698 16628867.709473867 16023799.034692813 14823539.716713324 16209329.528373973 16123406.986760696 14177383.45524315 14157405.315744951 1.1844203559662183 1.0288227064074031 1.0482417271597206 1.1745702929745407 1.1318316229084844 1.0470520117289812 1.1449364602387277 1.1388673720338631 1.0014111441364175 1.0 23.75505354537293 -7.771574541115961 24.80795099450827 1.0007054476364816 1.1090560816801052 0.4269514349977088 0.05162171075843045 207.14725401635764 507017.2258691191 0.04816911657112573 0.0130212967959775 1.6920977924780813e-08 7.771574541115961 0.10835063404362355 S(ph)RS(ph)PQRPGWSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPQRPGWSR 11 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RS(0.973)PQRPGWS(0.027)R 51.265 0.059284 19573000000.0 8414000.0 7536100.0 7000500.0 7798500.0 6375100.0 7372900.0 7409700.0 7971500.0 8379900.0 6742700.0 True False 7947258.64710683 7174054.44408329 7451763.431196023 8539667.09529547 6876784.100642837 7326882.996261609 8158744.787703196 7943848.727062097 6858321.400088218 6682964.923741225 1.1891815590523607 1.073483779422135 1.1150385369708649 1.2778261135201103 1.0290019742903436 1.0963521550491557 1.2208271150308247 1.1886713184505253 1.0262393231668836 1.0 22.672056871391334 -7.852709773009149 5.839988736739801 1.0037449587110994 1.145921596682808 0.3750823321354074 0.0701597832389615 0.23003843569252364 11.261041666136684 0.06811429016545434 0.017772634527528537 1.4037514794723207e-08 7.852709773009149 0.14217663797170865 S(ph)RS(ph)PRPSK ddPTM_KYSE-520_SHP099_60min_R1 3 SRSPRPSK 8 2 Q9NXE8 Q9NXE8 CWC25 Pre-mRNA-splicing factor CWC25 homolog 2 S(1)RS(0.999)PRPS(0.001)K;S(0.998)RS(0.976)PRPS(0.026)K;S(1)RS(0.996)PRPS(0.004)K 64.55 0.022969999999999997 2683450000.0 4561670.0 3293380.0 3360680.0 3864650.0 3616750.0 4460730.0 4656910.0 2846840.0 4166780.0 4552640.0 True False 4308625.0716363005 3135161.081335834 3577314.8100781157 4231945.174050612 3901367.6485074675 4432888.929446225 5127675.909861782 2836964.9764974504 3410197.787975939 4512307.151500321 0.954860767889815 0.6948022322224692 0.7927906257198549 0.9378672665586407 0.8646059582203488 0.982399641826756 1.1363756361658255 0.6287171686781501 0.7557547998127885 1.0 22.10543384425597 -2.562746342203434 10.001257325079967 0.8689466776098657 0.9670374712462837 0.0 0.14844647751545745 0.0 0.0 0.03505572549597342 0.0 0.002736866777689858 2.562746342203434 0.09809079363641804 S(ph)RS(ph)PS(ph)HTRPR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPSHTRPR 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 S(1)RS(1)PS(0.795)HT(0.205)RPR;S(0.999)RS(0.999)PS(0.836)HT(0.165)RPR 101.66 0.0015046 498450000.0 674861.0 613166.0 514077.0 770292.0 476284.0 639652.0 608170.0 633215.0 710740.0 566664.0 True False 637425.1150279497 583708.5849790705 547215.2259722821 843500.320083265 513764.841114738 635659.6946011382 669649.7587672167 631018.5249584914 581687.5322973657 561643.7978179211 1.1349277202106591 1.0392860871016019 0.974310102058108 1.5018421343926576 0.9147520957425315 1.1317844104586947 1.1923033092663295 1.1235208639534568 1.0356876272066349 1.0 19.09929591796915 -7.849469785258702 3.61842568430917 1.002631324377739 1.126729670667211 0.08107666509464673 0.14865579952374686 0.5987147773112412 14.114611164583842 0.13747378575992972 0.03696842019579116 1.4142631147791977e-08 7.849469785258702 0.12409834628947203 S(ph)RS(ph)PS(ph)KEK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPSKEK 8 2 Q08170;A0A0D9SEM4 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 3 S(1)RS(1)PS(1)KEK 44.188 0.055237 706820000.0 2235300.0 1708800.0 1596700.0 2356700.0 1973900.0 2209900.0 1798300.0 2048800.0 2380800.0 1341800.0 True False 2111303.4530399214 1626706.6830389074 1699625.836810327 2580680.059432306 2129234.7000453128 2196107.1943792156 1980089.7137166988 2041693.1909935127 1948506.7350839514 1329912.6959046046 1.587550415558531 1.2231680230200555 1.2779980535897086 1.9404883248196463 1.6010334412192453 1.6513168128569724 1.4888869922170678 1.5352084368250625 1.4651388328604382 1.0 20.342900110299077 -8.490045536695499 1.6208253791151754 0.9999717500165202 1.5380013061679627 0.42368824195085475 0.18719602527504806 3.134006318437733 9.18299212142912 0.19265311067464347 0.054944493205646566 3.23559729228624e-09 8.490045536695499 0.5380295561514425 S(ph)RS(ph)PS(ph)PAPEK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPSPAPEK 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 S(1)RS(1)PS(1)PAPEK;S(1)RS(1)PS(1)PAPEK 125.53 0.0020097 0.0 1065940.0 953140.0 800590.0 1122700.0 908140.0 1074430.0 966230.0 1030500.0 1081480.0 927390.0 True False 1006810.1833012914 907349.7237076933 852197.3123892905 1229401.0704479362 979605.4513902192 1067724.0838304288 1063905.9578960612 1026925.4360205077 885110.4938922193 919174.0460985025 1.0953422668696604 0.9871359266060673 0.9271337849523719 1.3375062923786998 1.0657453346819592 1.1616125241595507 1.1574586580331367 1.1172263189755667 0.9629411292117437 1.0 19.809978536896896 S(ph)RS(ph)PS(ph)PAPEKK ddPTM_KYSE-520_SHP099_60min_R1 5 SRSPSPAPEKK 11 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 S(1)RS(1)PS(1)PAPEKK;S(1)RS(1)PS(1)PAPEKK;S(1)RS(1)PS(1)PAPEKK;S(1)RS(1)PS(1)PAPEKK;S(1)RS(1)PS(1)PAPEKK 111.12 0.00018287 12300600000.0 11940500.0 10313600.0 9096200.0 11067900.0 9301000.0 10589600.0 9889900.0 10640800.0 12001000.0 9469300.0 True False 11278136.662203385 9818119.174970778 9682555.606434586 12119789.888314534 10032935.784549104 10523506.37838733 10889667.608122565 10603889.548381383 9821920.92059078 9385409.36900392 1.2016669938181228 1.0461045212791589 1.0316604450320532 1.2913437668836405 1.0689928792753243 1.1212623727572362 1.160276252209795 1.1298270678955777 1.0465095910497495 1.0 23.16198824264367 -7.900184833242403 3.225282692946494 1.0012934898814583 1.1293493464789814 0.2718151515240126 0.07259280953843164 0.30446884749701736 6.126945623680771 0.0685870061224207 0.018405996621901434 1.2583897343529626e-08 7.900184833242403 0.12805585659752317 S(ph)RS(ph)PSS(ph)PELNNK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPSSPELNNK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.994)RS(0.959)PS(0.047)S(1)PELNNK;S(0.994)RS(0.873)PS(0.137)S(0.996)PELNNK 127.07 0.00014428 1119210000.0 2701000.0 2379120.0 2294600.0 2362580.0 2448050.0 2379220.0 2356590.0 2489870.0 2840600.0 2419060.0 True False 2551170.145689989 2264823.504068077 2442513.5874898094 2587118.892864422 2640697.6075008535 2364370.405453149 2594817.115302027 2481233.2221100293 2324818.6456987066 2397629.0104002007 1.0640387376961875 0.9446096515532416 1.0187204012359345 1.0790321945731682 1.1013787354283309 0.9861285441564206 1.082242959209487 1.034869536257352 0.9696323474625705 1.0 21.19317701445584 -5.001708807341486 24.998699511311724 1.0408548217236482 0.9986594047125709 0.05775737436490502 0.04878730700373249 146.04432411880248 2136676.655996667 0.01257473245158994 0.02562609643739831 9.96073056377093e-06 5.001708807341486 -0.04219541701107732 S(ph)RS(ph)PT(ph)PGREEK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPTPGREEK 11 2 A0A0A0MQS2;Q8N2M8;F5H0Q6;Q8N2M8-4;Q8N2M8-3 A0A0A0MQS2 CLASRP CLK4-associating serine/arginine rich protein 3 S(1)RS(1)PT(1)PGREEK 114.27 0.00091116 0.0 472770.0 394270.0 365260.0 425200.0 394610.0 422400.0 397690.0 445760.0 442490.0 402980.0 True False 446544.50565636996 375328.67738866515 388805.244036663 465610.8801589589 425663.5619762308 419763.64491867553 437892.3862803726 444213.7626011666 362144.97026516235 399409.9107136954 1.1180105793029795 0.9397079724887144 0.9734491648990802 1.1657469373430687 1.0657310961954436 1.0509595121678643 1.0963483242013545 1.1121751130496795 0.9067000105682274 1.0 18.60751060581686 -3.8926495738733378 19.921849481695258 1.04278183348242 11.470263080721605 0.08728336826161154 0.07692759168201704 1455.3267726727502 271454.8889599633 0.018771675714280317 3525.986801172379 0.00012804140355813197 3.8926495738733378 10.427481247239184 S(ph)RS(ph)PT(ph)PPSSAGLGSNSAPPIPDSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPTPPSSAGLGSNSAPPIPDSR 24 1 J3QK89;Q8IWX8 J3QK89 CHERP Calcium homeostasis endoplasmic reticulum protein 3 S(0.99)RS(0.969)PT(0.819)PPS(0.164)S(0.058)AGLGSNSAPPIPDSR 87.45700000000001 0.025626999999999997 472750000.0 174940.0 154910.0 147770.0 157400.0 148770.0 129340.0 155680.0 159760.0 188770.0 143050.0 True False 165235.72946575604 147467.89107534933 157295.49064035952 172359.2486759643 160477.3526144899 128532.74108376288 171417.65369038295 159205.82984826434 154494.12650445153 141782.68829121607 1.165415407601585 1.0400980038723493 1.1094125279757763 1.2156579251900288 1.1318543508279073 0.9065474962624611 1.2090168112647 1.1228862406760254 1.0896543743558218 1.0 17.113321864270173 S(ph)RS(ph)PTPPS(ph)SAGLGSNSAPPIPDSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPTPPSSAGLGSNSAPPIPDSR 24 1 J3QK89;Q8IWX8 J3QK89 CHERP Calcium homeostasis endoplasmic reticulum protein 3 S(0.974)RS(0.947)PT(0.262)PPS(0.665)S(0.152)AGLGSNSAPPIPDSR 105.71 0.0071057 2351500000.0 236830.0 266410.0 283060.0 258900.0 202220.0 216700.0 211560.0 196780.0 277760.0 242700.0 True False 223692.5677910994 253611.26371043752 301306.50051201327 283505.77815887646 218133.56352559078 215347.49491921626 232946.54942662825 196097.41610879713 227325.78575979438 240549.86681774253 0.9299218110171917 1.0542980840749798 1.2525739652157206 1.1785738313198915 0.9068122398540511 0.8952301565079587 0.968391928494082 0.8152048417360975 0.9450256147181006 1.0 17.87597647509812 -5.772529940966088 24.9853902185586 0.9135410241424637 1.1109267924889685 0.49010060173697234 0.09062852924764916 178.86194736887825 402948.27477440715 0.02959055327900716 0.03386159875969458 1.6883794558557238e-06 5.772529940966088 0.1973857683465048 S(ph)RS(ph)PVDLR ddPTM_KYSE-520_SHP099_60min_R1 4 SRSPVDLR 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 S(1)RS(1)PVDLR;S(1)RS(1)PVDLR;S(1)RS(1)PVDLR;S(1)RS(1)PVDLR 78.964 0.028841000000000002 6927600000.0 6513420.0 6196360.0 5599540.0 5509930.0 5670730.0 6085710.0 5571970.0 5804200.0 6809530.0 5827850.0 True False 6152107.608419135 5898677.5646740245 5960495.3079807805 6033592.090579135 6116984.188959914 6047726.826510491 6135239.104786768 5784066.584910469 5573091.00628202 5776219.782998694 1.0650750559261617 1.0212003327913117 1.0319024434500346 1.0445572220672719 1.0589943628814473 1.0470042785267504 1.0621547197433145 1.0013584666454125 0.9648336136179325 1.0 22.461694206599436 -7.424758896715593 4.4973661018258655 0.9823626042168799 1.04582556521414 0.7650213344285418 0.015060795451751742 0.10453123662049578 3.5084541919621994 0.009099895102679905 0.004036316665250343 3.760461124211376e-08 7.424758896715593 0.06346296099726001 S(ph)RS(ph)RAS(ph)PATHR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSRASPATHR 11 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)RS(0.998)RAS(0.93)PAT(0.071)HR 72.207 0.012598999999999999 231570000.0 115240.0 116630.0 112050.0 136950.0 106570.0 122270.0 122090.0 107450.0 151050.0 114880.0 True False 108847.40747475534 111026.91973480103 119272.92228633878 149965.68682448094 114956.4526996449 121506.8675762465 134432.0486835746 107077.28102901849 123623.12766063152 113862.25257528751 0.9559569129618591 0.9750985706293515 1.0475194332509246 1.317079922736653 1.0096098584000337 1.0671391512819777 1.1806550954600694 0.9404107033471634 1.0857252940687254 1.0 16.796930020882677 -2.2467381799052237 13.482297699748703 1.0631967687892303 1.03101310795088 0.0 0.10964736916919998 0.0 0.0 0.02547118288772983 0.0 0.005665807567003071 2.2467381799052237 -0.032183660838350336 S(ph)RS(ph)RAS(ph)PVSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSRASPVSR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)RS(1)RAS(0.986)PVS(0.014)R 44.638999999999996 0.052474 810450000.0 1377200.0 1328900.0 1119200.0 1264300.0 1165100.0 1302200.0 1148400.0 1307200.0 1459200.0 1104000.0 True False 1300803.9706198655 1265057.6492804338 1191345.422783316 1384458.6918743444 1256786.741487812 1294072.4867734348 1264491.4793039297 1302665.6283027737 1194246.0634385524 1094219.4188990025 1.188796276279512 1.1561279460323668 1.0887628223432932 1.2652477811693188 1.1485692172712343 1.18264441703614 1.15561052697845 1.1904976331104675 1.0914136989454968 1.0 20.06147063361252 -8.012018492966188 3.4215571139413403 1.000310504937485 1.1706409726219396 0.6266345049232629 0.041953699812710625 0.13538861115963752 4.099535773420104 0.039092458093976545 0.010366615181303846 9.727058034981591e-09 8.012018492966188 0.1703304676844546 S(ph)RS(ph)RDKEER ddPTM_KYSE-520_SHP099_60min_R1 1 SRSRDKEER 9 3 P08621;P08621-2;P08621-4 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 2 S(1)RS(1)RDKEER 72.891 0.030670999999999997 190740000.0 492560.0 395420.0 536450.0 350720.0 366880.0 514420.0 424010.0 198560.0 702860.0 352130.0 True False 465236.7149059838 376423.42966247967 571030.425350348 384052.32335218746 395751.36873834755 511209.31396559026 466873.06873881875 197871.24170425255 575238.3416587308 349010.4021529947 1.3330167583430346 1.0785450156796987 1.6361415643423345 1.1004036584096755 1.1339242793252424 1.46473947713883 1.3377053115286717 0.5669494103431114 1.648198271771181 1.0 18.412910510616427 -8.072498931042077 0.25806560701850684 0.9610046885791345 1.3340892064428624 0.05367885190355415 0.3011971315107844 8.544995436364026 1.7872998730495884 1.1325284975768297 0.6421285314183179 8.46254651747623e-09 8.072498931042077 0.373084517863728 S(ph)RS(ph)RDS(ph)GDENEPIQER ddPTM_KYSE-520_SHP099_60min_R1 4 SRSRDSGDENEPIQER 16 2 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-4;Q8WX93-7 Q8WX93-3 PALLD Palladin 3 S(1)RS(1)RDS(1)GDENEPIQER;S(1)RS(1)RDS(1)GDENEPIQER;S(1)RS(1)RDS(1)GDENEPIQER;S(1)RS(1)RDS(1)GDENEPIQER 179.78 2.5703999999999996e-08 5314920000.0 1526100.0 1499280.0 1264620.0 1318650.0 1265110.0 1393000.0 1331940.0 1477810.0 1648930.0 1312040.0 True False 1441444.1907950738 1427252.3383348414 1346139.4286635418 1443974.0995334196 1364666.959508752 1384305.7702928868 1466585.4936817128 1472683.8220334465 1349525.878142635 1300416.3463516738 1.108448224938924 1.097534910522316 1.035160341101636 1.1103936855181018 1.049407724946963 1.0645096658286135 1.1277814968999949 1.1324710168132461 1.0377644682249176 1.0 20.310542165386856 -7.982416233800242 7.449984629675407 1.0000221253098116 1.088631861588618 0.4876697445548064 0.030631106851264293 0.11567704082964905 30.230764596006782 0.030702406867459387 0.007945602696670516 1.0413189366047774e-08 7.982416233800242 0.0886097362788063 S(ph)RS(ph)RS(ph)PGSYK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSRSPGSYK 10 2 Q86X95 Q86X95 CIR1 Corepressor interacting with RBPJ 1 3 S(1)RS(1)RS(0.989)PGS(0.011)YK 112.08 0.0037861999999999995 309270000.0 924430.0 865740.0 739830.0 738310.0 665540.0 768910.0 732980.0 750900.0 982140.0 717570.0 True False 873150.025094483 824148.5508977663 787520.6255698527 808478.7604190052 717914.2115953998 764110.9474773166 807076.771595434 748295.3031613769 803808.1337346075 711212.8880610132 1.2276915108709021 1.1587930487939422 1.107292399771998 1.136760559307592 1.009422387651968 1.0743772508967322 1.134789294659403 1.052139683803343 1.1301934304453307 1.0 19.439921942267656 -4.221701748382301 0.9001563943652725 1.0757285931912015 1.3214722688830935 0.5474903364360701 0.04479350537590265 1.8104888840368691 1.1018131557386175 0.015331547473515178 0.4466724760851076 6.0020312408518235e-05 4.221701748382301 0.24574367569189204 S(ph)RS(ph)RS(ph)PHEAGFCVYLK ddPTM_KYSE-520_SHP099_60min_R1 4 SRSRSPHEAGFCVYLK 16 2 Q9NTZ6 Q9NTZ6 RBM12 RNA-binding protein 12 3 S(1)RS(1)RS(1)PHEAGFCVYLK;S(1)RS(1)RS(1)PHEAGFCVYLK;S(1)RS(1)RS(1)PHEAGFCVYLK;S(1)RS(1)RS(1)PHEAGFCVYLK 124.86 6.0818e-05 2019530000.0 3592040.0 3698440.0 3323610.0 3160090.0 2638320.0 2777000.0 2703790.0 3288640.0 3911430.0 2638700.0 True False 3392782.3806457883 3520761.390928386 3537855.218564022 3460424.003484295 2845940.774012639 2759667.7129241503 2977115.4796474916 3277232.475414347 3201212.9111262746 2615323.170877533 1.2972707994275867 1.3462051000553963 1.3527411288819602 1.3231343804915707 1.0881793904872283 1.0551918568435215 1.1383356033390568 1.2530889153231186 1.2240219284457128 1.0 21.318557798096638 -5.750527089280883 23.986800722517195 1.1361534789231034 1.3326430034079522 0.6604646607631075 0.07122012922202492 89.43208103106119 196582.89407142322 0.02261109126399872 0.028871071163267557 1.7761224785287235e-06 5.750527089280883 0.1964895244848488 S(ph)RS(ph)RS(ph)PLAIR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSRSPLAIR 10 2 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)RS(1)RS(1)PLAIR 81.373 0.0053696 672470000.0 811120.0 806000.0 629300.0 754140.0 662560.0 784230.0 601360.0 733660.0 853160.0 661650.0 True False 766125.5566723675 767278.5501693343 669865.6849156 825813.2388595421 714699.702549279 779335.3296746522 662151.3375080214 731115.1046975307 698247.6504134015 655788.295755911 1.1682513421336278 1.1700095215711515 1.0214663623166105 1.2592680354376369 1.0898329646543359 1.1883946918819763 1.009702890084026 1.1148645217200657 1.0647455206692102 1.0 19.322870627760363 -7.602391522774024 0.5058523496671584 1.0011804144825072 1.152439402600569 0.31055444683953437 0.06840968456145187 1.0867642681189464 0.6981166040700262 0.07058246704749609 0.04072784485765713 2.4980922798358472e-08 7.602391522774024 0.15125898811806193 S(ph)RS(ph)RS(ph)PPPVSK ddPTM_KYSE-520_SHP099_60min_R1 10 SRSRSPPPVSK 11 2 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 3 S(1)RS(1)RS(1)PPPVSK;S(1)RS(1)RS(1)PPPVSK;S(0.998)RS(0.999)RS(0.997)PPPVS(0.007)K;S(1)RS(1)RS(1)PPPVS(0.001)K;S(1)RS(1)RS(1)PPPVSK;S(1)RS(1)RS(1)PPPVSK;S(0.996)RS(0.87)RS(0.988)PPPVS(0.146)K;S(0.999)RS(0.939)RS(0.987)PPPVS(0.075)K;S(0.997)RS(0.982)RS(0.957)PPPVS(0.064)K;S(1)RS(1)RS(0.987)PPPVS(0.014)K 109.79 0.0018039000000000002 54691791000.0 44536820.0 43443390.0 37567600.0 39947360.0 37971060.0 40015990.0 38546230.0 40616550.0 46616400.0 39573060.0 True False 42066273.81265044 41356304.33454213 39989267.60628523 43743945.083788306 40959166.39622199 39766235.36323214 42442859.10335215 40475660.668023996 38152036.863813676 39222473.475774765 1.0725043599973907 1.0544032711268274 1.0195498667615663 1.1152775744958097 1.0442780061160566 1.013863528718892 1.08210562318479 1.0319507435711122 0.9727085898184817 1.0 25.225177182880632 -7.594078550262181 4.6391510506305185 0.9877564638509407 1.0560344021847567 0.49247147140088354 0.028506851347309552 0.17810500589328815 7.2369986653256335 0.020624242453896723 0.0072863758261137715 2.5463696524583265e-08 7.594078550262181 0.06827793833381601 S(ph)RS(ph)RS(ph)PSDKR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSRSPSDKR 10 3 A0A0C4DG89;Q7L014;D6RJA6 A0A0C4DG89 DDX46 Probable ATP-dependent RNA helicase DDX46 3 S(0.999)RS(0.97)RS(0.8)PS(0.231)DKR 51.43600000000001 0.046799 533680000.0 659790.0 487380.0 565820.0 718100.0 468590.0 680010.0 756380.0 441440.0 671490.0 449970.0 True False 623190.1334412436 463965.5332277058 602293.6625440093 786348.0080953615 505465.36708760995 675765.8053530974 832842.2719574261 439908.7476728705 549564.342885385 445983.61587136285 1.3973386269440742 1.0403196815228513 1.35048383193909 1.7631768973373487 1.1333720547110944 1.5152256300554585 1.8674279554647288 0.9863787188983989 1.2322523144973525 1.0 18.766631185175864 -9.38821106174016 13.34615469027238 1.0000167716496706 1.368067997181321 0.13705072151148467 0.2747592585147399 0.0 0.0 0.27070056019622946 0.06565452956487801 4.090618124399973e-10 9.38821106174016 0.3680512255316504 S(ph)RS(ph)RS(ph)RS(ph)PPPVSK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSRSRSPPPVSK 13 3 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 4 S(1)RS(0.999)RS(0.994)RS(0.994)PPPVS(0.012)K 65.02199999999999 0.016371 1149000000.0 1452400.0 1370600.0 1334600.0 1065600.0 1087200.0 1121200.0 927970.0 1073400.0 1820400.0 1056300.0 True False 1371832.4767123815 1304754.318687456 1420630.451435501 1166874.303615679 1172756.454678183 1114202.1749119782 1021778.2637144441 1069676.6259334423 1489861.2485495773 1046942.0037889655 1.3103232765020525 1.246252718837765 1.3569332840731652 1.1145548649234334 1.1201732764889412 1.0642444097949961 0.9759645329125665 1.0217152641332552 1.4230599624025515 1.0 19.997750094531277 -5.318515643473721 6.766063865335888 1.0967709044400211 1.298406518451308 0.3711426288587163 0.12008776038957691 0.2560411970255312 25.289999251477017 0.03395719269028022 0.05087235378904933 4.802687804404244e-06 5.318515643473721 0.20163561401128693 S(ph)RS(ph)RS(ph)YS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSRSYSPR 9 2 Q8IYB3;P62995;P62995-3;H7C2L4;H7BXF3;Q13595;Q13595-3;Q13595-4 Q8IYB3;P62995;Q13595 SRRM1;TRA2B;TRA2A Serine/arginine repetitive matrix protein 1;Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 4 S(0.99)RS(0.976)RS(0.847)Y(0.188)S(0.999)PR 70.438 0.019152000000000002 173500000.0 320720.0 316140.0 307230.0 311130.0 227450.0 287960.0 246970.0 270270.0 396770.0 226400.0 True False 302929.0222605306 300952.1598641856 327034.53738538036 340699.70165535493 245349.0209865277 286162.73482666124 271936.1377949248 269332.49645149225 324726.5697577539 224394.27213653477 1.349985538294893 1.3411757662025727 1.4574103620006538 1.5183083704028464 1.0933836173734544 1.2752675551920634 1.2118675543975683 1.200264578445275 1.4471250387361538 1.0 17.77567632477887 -5.757679270395642 24.999999489733064 1.218556236974034 1.414230439685869 0.43012306474466955 0.11892662412009924 101.22007617328693 672981.3469641878 0.034893735189969036 0.04330439839950826 1.7471119313573286e-06 5.757679270395642 0.195674202711835 S(ph)RS(ph)RT(ph)PLISR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSRTPLISR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)RS(1)RT(1)PLISR;S(0.999)RS(0.803)RT(0.943)PLIS(0.255)R 94.67299999999999 0.006162 5552100000.0 3656600.0 3283300.0 2811600.0 3260300.0 2994500.0 3137300.0 3135000.0 3223000.0 3647800.0 2959500.0 True False 3453761.108748621 3125565.3396662287 2992840.234719058 3570157.9317550645 3230150.1136256605 3117718.946977652 3451916.39465154 3211820.165253858 2985451.4735547886 2933281.1324561583 1.1774395132241018 1.0655526008340914 1.0203046007434782 1.2171209545010855 1.101207135546848 1.0628776466328873 1.1768106222266894 1.094958178306103 1.017785660065575 1.0 21.484083918279065 -7.755130039265526 3.7629307616871857 1.0024888951791597 1.1141118021354863 0.3597867546774892 0.05707443342886295 0.24476685961000455 7.047302082915657 0.05054748996702793 0.014687907445831622 1.7573973238853908e-08 7.755130039265526 0.1116229069563266 S(ph)RS(ph)RT(ph)PLLPR ddPTM_KYSE-520_SHP099_60min_R1 3 SRSRTPLLPR 10 2 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)RS(1)RT(1)PLLPR;S(1)RS(1)RT(1)PLLPR;S(1)RS(1)RT(1)PLLPR 79.61399999999999 0.018106999999999998 1951640000.0 2491630.0 2223450.0 2113270.0 2209110.0 2202980.0 2321280.0 2070540.0 2272250.0 2552190.0 2186670.0 True False 2353414.3169587348 2116632.1245335094 2249494.765551554 2419063.150206859 2376341.992758408 2306792.030484903 2279850.389723058 2264368.095097138 2088776.6314742577 2167297.805003518 1.0858749136946202 0.9766226494794396 1.0379260110716084 1.1161655516939597 1.0964538363266376 1.0643632015680278 1.0519322192177265 1.0447886256653423 0.9637700119715976 1.0 21.04746597484721 -7.654981722582006 4.879897050401346 0.9825952576907353 1.0599281675319316 0.42107458239881446 0.03660099626880577 0.21800347454823019 8.187384628661336 0.029386433241465896 0.010203171279385529 2.213187850342933e-08 7.654981722582006 0.07733290984119634 S(ph)RS(ph)RT(ph)PPVTR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSRTPPVTR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)RS(1)RT(0.995)PPVT(0.006)R;S(1)RS(1)RT(0.936)PPVT(0.064)R 113.37 0.0024744 854660000.0 1399750.0 1384190.0 1188750.0 1298310.0 1220970.0 1376700.0 1194130.0 1383190.0 1687030.0 1288010.0 True False 1322103.0771675545 1317691.434688453 1265378.7270672491 1421700.9920488663 1317053.392630999 1368107.504639064 1314844.313985723 1378392.0367289716 1380707.8785654735 1276599.233456617 1.035644580161409 1.0321888029969841 0.9912106273485796 1.113662733604626 1.0316890047511977 1.0716812831969766 1.029958564541474 1.0797374779841695 1.0815515491318008 1.0 20.28387425595394 -5.236451201332548 24.998984671581475 1.0599128516497478 1.0209320900888297 0.2304380710302475 0.03224706018004472 1099.422262827035 1099897.441656703 0.008246595090270656 0.014275975278398946 5.801613575799292e-06 5.236451201332548 -0.03898076156091812 S(ph)RS(ph)RT(ph)PTTR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSRTPTTR 9 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.968)RS(0.947)RT(0.92)PT(0.164)T(0.001)R 74.53699999999999 0.030889999999999997 120330000.0 237290.0 207040.0 213670.0 253820.0 203760.0 249760.0 229030.0 181650.0 275210.0 195300.0 True False 224127.0506741122 197093.48762662444 227443.51008408752 277942.9764862342 219794.75276418938 248201.1551962319 252182.58751739783 181019.8985474286 225238.80147952586 193569.793941101 1.1578616999629037 1.0182037373382524 1.17499484528714 1.4358799006151037 1.135480636152705 1.282230817850403 1.302799276596489 0.9351660445663798 1.163605110558009 1.0 17.56249431583378 -7.258831173629791 24.994558647574905 1.0370391844417373 1.214197794836365 0.33483883050565255 0.11777578294721615 290.53616051209974 2784256.3156860145 0.0608493910975749 0.033075512140545 5.510218574062536e-08 7.258831173629791 0.17715861039462766 S(ph)RS(ph)RTS(ph)PVSR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSRTSPVSR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.997)RS(0.947)RT(0.421)S(0.623)PVS(0.011)R;S(0.999)RS(0.833)RT(0.406)S(0.761)PVS(0.001)R 107.11 0.012562 287280000.0 585330.0 544400.0 466140.0 506900.0 485560.0 483010.0 480530.0 506020.0 657090.0 488780.0 True False 552860.5780735739 518246.20683894114 496188.13025037077 555075.623594958 523770.8095415177 479995.3554265379 529106.6619208615 504264.73472595616 537779.0198909249 484449.78946508566 1.1412133725644205 1.0697624771623337 1.0242302526299913 1.145785663789544 1.0811663477444156 0.990805168800948 1.0921806003984118 1.0409019586586044 1.1100820592464777 1.0 18.88598762048271 -6.019303549755482 24.56532240314682 1.0503868566940653 1.0914950045473122 0.19317652984152367 0.046803046660926044 1189.5106980689754 1513746.860394289 0.01506784517344293 0.015306829081603045 9.565252750745283e-07 6.019303549755482 0.0411081478532469 S(ph)RS(ph)RTS(ph)VTR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSRTSVTR 9 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.998)RS(0.831)RT(0.408)S(0.763)VT(0.001)R 100.11 0.018809 136510000.0 383380.0 341250.0 326680.0 372970.0 314170.0 345140.0 286700.0 349850.0 437740.0 313700.0 True False 362113.1471509177 324855.83777330705 347738.31550648046 408416.95666248037 338893.39161722263 342985.8532368174 315682.43392235885 348636.45200560376 358257.450527407 310920.8620549069 1.164647314939486 1.044818400496842 1.1184142267207267 1.3135720580575136 1.0899667181463557 1.1031291080630286 1.015314417424364 1.121302860481702 1.1522464210334677 1.0 18.24618789579059 -5.959331961972392 24.999970504499306 1.0836489272036967 1.1556954279350853 0.21160216262029974 0.0754045292978877 283.90443997150425 174524.16132902194 0.02431977743516233 0.02757598824035855 1.0981661125539325e-06 5.959331961972392 0.07204650073138863 S(ph)RS(ph)SS(ph)PVTELASR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSSSPVTELASR 13 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.975)RS(0.655)S(0.654)S(0.704)PVT(0.013)ELASR;S(1)RS(0.976)S(0.027)S(0.903)PVT(0.094)ELASR 151.44 6.5957e-06 673310000.0 1500920.0 1282330.0 1034610.0 1149610.0 1192660.0 1308990.0 1155890.0 1434410.0 1479610.0 1238010.0 True False 1417660.9755901583 1220724.9419834295 1101302.6160345308 1258868.5887571503 1286515.5566928633 1300820.1078648122 1272738.6415992868 1429434.3665038114 1210950.1219327825 1227042.1945572053 1.1553481875998082 0.9948516419388043 0.8975262797967194 1.0259374896324815 1.0484688810209333 1.0601266310440374 1.0372411374643655 1.1649431232636969 0.9868854773733108 1.0 20.226753429434837 -5.712541455966001 4.03824824702867 1.0582041476530686 1.006656320627421 0.028645608533385714 0.07393391068612878 0.574141056164481 19.410282103293387 0.02295096940138701 0.02919750349905179 1.938467588972795e-06 5.712541455966001 -0.05154782702564753 S(ph)RS(ph)SS(ph)VGSSSSYPISPAVSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSSSVGSSSSYPISPAVSR 20 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 3 S(0.775)RS(0.573)S(0.586)S(0.815)VGS(0.195)S(0.021)S(0.017)S(0.015)Y(0.004)PISPAVSR 94.85600000000001 0.0015508 1439600000.0 440870.0 368450.0 405800.0 386480.0 385840.0 389770.0 408480.0 394280.0 479980.0 371520.0 True False 416414.0622474439 350749.1089452749 431958.51730295655 423210.9430005507 416203.4128707049 387337.30085216 449773.144780625 392912.334705644 392827.7313111545 368228.621838186 1.1308574009503054 0.9525308141294018 1.1730715422028652 1.1493157182836429 1.1302853395616836 1.0518935190822052 1.221450800145223 1.067033661707875 1.0668039039175459 1.0 18.49024224392519 -7.966858518836199 2.011140101009866 1.0026197564357506 1.1112914185060438 0.1983981496949403 0.0695355802320381 0.5311961626437914 4.878364523446885 0.06620182345965839 0.01860571436580379 1.0792982705724539e-08 7.966858518836199 0.10867166207029322 S(ph)RS(ph)T(ph)PVRDR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSTPVRDR 9 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 3 S(1)RS(1)T(1)PVRDR 90.861 0.011937 317420000.0 916500.0 817630.0 746310.0 851180.0 629730.0 761110.0 695180.0 805850.0 1058500.0 697870.0 True False 865659.9180025457 778349.8275123488 794418.3367382205 932075.8912834005 679286.1683264277 756359.6301705803 765455.5787029839 803054.6944368044 866303.0826135611 691687.4147346447 1.2515189658823602 1.1252912962294548 1.148522178971533 1.3475391794441962 0.9820710249398212 1.0934991935059946 1.1066495679940038 1.1610081047157466 1.2524488145355441 1.0 19.39976068123487 -5.766948561724777 24.999995996029394 1.107409377550907 1.2066020183063804 0.2840473434788905 0.09122246731588109 220.6832662680596 1001432.2489332514 0.028639401069439747 0.03339802398743488 1.7102178630187868e-06 5.766948561724777 0.0991926407554733 S(ph)RS(ph)T(ph)TPAPK ddPTM_KYSE-520_SHP099_60min_R1 3 SRSTTPAPK 9 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)RS(0.847)T(0.663)T(0.49)PAPK;S(1)RS(0.848)T(0.642)T(0.51)PAPK;S(1)RS(0.711)T(0.711)T(0.579)PAPK 111.94 0.0014112 635310000.0 3127850.0 2405700.0 2708090.0 2702070.0 2552150.0 2923670.0 2991800.0 2058000.0 3348030.0 2176660.0 True False 2954341.9252856066 2290126.5609706803 2882657.8144972 2958873.9203930288 2752989.685252876 2905422.291049676 3294240.341154212 2050861.2783408116 2740112.1489680465 2157376.4858158547 1.369414167953334 1.0615331056158348 1.3361867219049928 1.3715148653222073 1.2760821782164637 1.3467386476825036 1.5269659064205614 0.950627436529808 1.2701131058874124 1.0 21.040846533872408 -7.273306914837936 24.999388762093783 1.0827777143102595 1.3175908625678434 0.43026467732632745 0.133163715876475 811.6641361216707 1709790.1181726982 0.07142294839743657 0.0347322460337092 5.329581221820335e-08 7.273306914837936 0.23481314825758393 S(ph)RS(ph)TTPAPK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSTTPAPK 9 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.921)RS(0.579)T(0.279)T(0.22)PAPK 74.611 0.058045000000000006 1442100000.0 4574700.0 3668700.0 3127800.0 3384900.0 3475900.0 3648600.0 3458000.0 3174000.0 4164500.0 3132400.0 True False 4320932.271561641 3492450.145169033 3329422.9926569457 3706599.878292705 3749433.5548343393 3625827.7340205526 3807568.386827759 3162990.134817166 3408331.7785018138 3104649.372970327 1.3917617587288622 1.1249096840290482 1.0723990353447128 1.1938867913919926 1.2076834142617288 1.1678702804856822 1.2264085020283386 1.018791417270744 1.0978153630408007 1.0 21.565998914600822 -1.0000070276324293 0.03891932447210311 0.5280471185856331 2.1546827763211676 0.4135343558830805 0.08352247337584084 921.2648839437311 2.7386367809897596 31.895686750126018 100.27901105616866 0.09999838184092526 1.0000070276324293 1.6266356577355343 S(ph)RS(ph)VRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSVRPR 7 2 Q9NZI7-4;Q9NZI7 Q9NZI7-4 UBP1 Upstream-binding protein 1 2 S(1)RS(1)VRPR 59.931000000000004 0.04843 5805400000.0 227070.0 179380.0 152940.0 162490.0 165970.0 213240.0 190430.0 133400.0 200200.0 229110.0 True False 214473.97444717708 170762.3155451307 162798.75711265192 177933.00074560026 179030.89475987694 211909.09006263813 209680.5228177007 132937.26653579395 163848.72663130375 227080.2636448825 0.9444853154767353 0.7519910044325818 0.716921649198203 0.7835687606205145 0.7884035886088844 0.9331902590796279 0.9233762523087773 0.5854197295793471 0.7215454306832105 1.0 17.79284279616199 -9.949739052069202 5.220304244887474 1.0000006843602043 0.7920463886400685 0.24783927714278187 0.10742672545858033 150597280.5828228 23.065849630313103 1238.9008960378014 0.027350866717188407 1.12269282707309e-10 9.949739052069202 -0.2079542957201358 S(ph)RS(ph)WS(ph)KER ddPTM_KYSE-520_SHP099_60min_R1 3 SRSWSKER 8 2 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6 A0A087X0H9 RBM26 RNA-binding protein 26 3 S(1)RS(1)WS(1)KER;S(1)RS(1)WS(1)KER;S(1)RS(1)WS(1)KER 58.754 0.038991000000000005 1531670000.0 3777010.0 3556270.0 2935680.0 3799130.0 3286950.0 3495330.0 3304990.0 3869820.0 4284400.0 3205820.0 True False 3567491.726017234 3385421.451129899 3124918.6300540795 4160198.1729499106 3545614.264812777 3473514.3489431674 3639090.642794057 3856396.49764278 3506460.960934853 3177418.928890221 1.1227640439793232 1.065462731510927 0.9834770610954728 1.309301123350123 1.1158787506975532 1.093187403574877 1.1452977162394775 1.2136884005376358 1.103556389449583 1.0 21.59942388499339 -5.172960840713928 24.999782710008713 1.1463316268981272 1.0580580223178164 0.17255045862908736 0.08239906312933581 117.55201636537831 33211.13892816529 0.021608861937255242 0.03742764600004353 6.714893967758832e-06 5.172960840713928 -0.08827360458031075 S(ph)RS(ph)WTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSWTSPK 8 1 O75494;O75494-2 O75494 SRSF10 Serine/arginine-rich splicing factor 10 3 S(1)RS(0.755)WT(0.273)S(0.973)PK;S(1)RS(0.818)WT(0.434)S(0.748)PK 71.268 0.033438 712460000.0 3195500.0 2857100.0 2375900.0 2994300.0 2780100.0 2840500.0 2512000.0 3015100.0 3338600.0 2696700.0 True False 3018239.244928681 2719840.627405466 2529054.315574409 3278877.371730877 2998878.05339479 2822771.385870023 2765937.474757465 3004641.321829628 2732394.3992570965 2672809.336000853 1.129238514799814 1.017596201409182 0.9462157593921251 1.226753187205206 1.1219947539848882 1.0561065272592725 1.0348427916283596 1.1241510127038365 1.0222930466657965 1.0 21.349925496386337 -9.581731042824195 11.243435014779026 0.9999958513126258 1.0754481064331856 0.0849350055168091 0.07431109613325593 0.0 0.0 0.07318692115098271 0.017750435665838414 2.6198049427125827e-10 9.581731042824195 0.07545225512055975 S(ph)RS(ph)WTSPK ddPTM_KYSE-520_SHP099_60min_R1 5 SRSWTSPK 8 1 O75494;O75494-2 O75494 SRSF10 Serine/arginine-rich splicing factor 10 2 S(0.996)RS(0.945)WT(0.058)S(0.001)PK;S(0.996)RS(0.465)WT(0.466)S(0.073)PK;S(1)RS(0.963)WT(0.037)SPK;S(1)RS(0.626)WT(0.369)S(0.005)PK;S(1)RS(0.94)WT(0.059)S(0.001)PK 98.368 0.0098059 2743620000.0 7640000.0 6835900.0 5693340.0 6835690.0 6525760.0 6686500.0 6324820.0 6924040.0 7399710.0 6407260.0 True False 7216193.970037578 6507493.103104916 6060341.80606608 7485351.922374866 7039300.185504686 6644767.073268756 6964194.529894717 6900022.121323084 6056109.195509103 6350496.661172851 1.1363196227088235 1.0247219155144112 0.954309895652605 1.178703386798163 1.1084645124755679 1.046338172870019 1.0966377751954481 1.0865326744457722 0.953643394938912 1.0 22.598437996262685 -7.756725334449885 24.99897295972288 0.9768216791102821 1.0768419921078853 0.3217648036381521 0.059274507567261776 134.34614476802477 712479.2199015743 0.04430765781048967 0.015500040812668562 1.750953713093304e-08 7.756725334449885 0.10002031299760328 S(ph)RS(ph)Y(ph)SPAHNR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSYSPAHNR 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 3 S(0.997)RS(0.807)Y(0.742)S(0.454)PAHNR;S(0.998)RS(0.893)Y(0.583)S(0.526)PAHNR 94.023 0.001726 453960000.0 593170.0 541570.0 446180.0 544060.0 471780.0 524420.0 475440.0 530070.0 599790.0 450510.0 True False 560265.6776449202 515552.16428685695 474941.4767132407 595767.2988223963 508906.40193899313 521146.90025627776 523502.1150472495 528231.3108892684 490883.2554754727 446518.83189147664 1.2547414299898754 1.154603406317605 1.0636538546456469 1.3342489863164237 1.1397199078552624 1.1671330815962964 1.1724076962883463 1.1829989535976646 1.0993562206459828 1.0 18.7683614965997 -8.026386557398379 2.393570736859031 1.0001728717446434 1.1819545881364524 0.42443196151277596 0.06742116875811086 0.2974942951241149 3.985706227540697 0.06299999723703524 0.017228155238176435 9.410516111962584e-09 8.026386557398379 0.18178171639180896 S(ph)RS(ph)Y(ph)SRDYR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSYSRDYR 9 2 P62995 P62995 TRA2B Transformer-2 protein homolog beta 3 S(0.935)RS(0.938)Y(0.798)S(0.322)RDY(0.007)R 48.115 0.044150999999999996 766320000.0 1230500.0 1089000.0 1109700.0 1162600.0 1006200.0 1203100.0 1031800.0 1269300.0 1506400.0 1108800.0 True False 1162241.7120590645 1036682.8053776748 1181233.0375827781 1273093.1544515647 1085382.2155051387 1195591.006632714 1136104.413397594 1264897.0945568474 1232875.7332537242 1098976.8946333458 1.0575670132235364 0.9433162884862522 1.074847927514323 1.1584348685295243 0.9876296952241724 1.0879127782132325 1.0337837118737925 1.1509769684274007 1.1218395393699805 1.0 20.0677296240842 -4.873400481179773 9.014523729589609 1.0812912317774515 1.0007630641381504 0.20130793152981075 0.06055348212766205 0.36066211620395194 26.931330556515086 0.015464811497504694 0.032337138649568144 1.3384418847125336e-05 4.873400481179773 -0.08052816763930104 S(ph)RS(ph)YS(ph)PAHNR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSYSPAHNR 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 3 S(0.97)RS(0.82)Y(0.468)S(0.742)PAHNR 93.478 0.006500399999999999 396740000.0 552000.0 520010.0 429400.0 514580.0 392630.0 459860.0 429200.0 434960.0 568890.0 422300.0 True False 521379.45961528074 495027.9390490771 457079.81106429145 563485.5284858813 423527.74724088976 456989.8431635941 472587.7245883375 433451.2252804275 465593.916549861 418558.7505444281 1.245654185791389 1.1826964276942817 1.0920326249773973 1.346251936563132 1.0118716827446526 1.091817678089821 1.1290833699537586 1.0355803688648928 1.1123741074443032 1.0 18.67507061374829 -1.0000050169396186 0.12374224683709627 0.9558318123874499 1.8598664306118515 0.3796941467139504 0.08094274280092909 96.39099465202615 0.8169147680696518 0.5008795509257661 15.086753357416292 0.0999988448136345 1.0000050169396186 0.9040346182244017 S(ph)RS(ph)YS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSYSPR 7 1 Q8IYB3;P62995;P62995-3;H7C2L4;H7BXF3;Q13595;Q13595-3;Q13595-4;J3KTL2;Q07955;J3KSR8 Q8IYB3;P62995;Q13595;J3KTL2 SRRM1;TRA2B;TRA2A;SRSF1 Serine/arginine repetitive matrix protein 1;Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha;Serine/arginine-rich splicing factor 1 3 S(1)RS(0.993)Y(0.013)S(0.995)PR;S(0.568)RS(0.915)Y(0.524)S(0.993)PR 102.05 0.009344700000000001 5342900000.0 5662200.0 5025500.0 4558400.0 5641300.0 4369700.0 5290200.0 4846700.0 5205100.0 6351000.0 4351700.0 True False 5348106.478684139 4784067.436570712 4852241.757697873 6177447.455881314 4713570.529808003 5257181.899499942 5336651.735233683 5187044.722979473 5197818.49568136 4313147.323571371 1.2399545105859733 1.1091824780539632 1.124988643717396 1.4322365995062432 1.092837822637849 1.218873714507598 1.2372987368339716 1.2026124622806758 1.2051103534709462 1.0 22.040309564171427 -8.803504109238482 2.645149835333735 0.9999997008553602 1.206215208909872 0.3192509833132726 0.09068117398381556 129.4702061950098 420.87858785646534 0.08569481626766244 0.02302800234591294 1.572156916846198e-09 8.803504109238482 0.20621550805451194 S(ph)RS(ph)YSRDY(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SRSYSRDYR 9 2 P62995 P62995 TRA2B Transformer-2 protein homolog beta 3 S(0.964)RS(0.819)Y(0.365)S(0.416)RDY(0.436)R 60.08 0.027828 323350000.0 591790.0 545060.0 531870.0 544150.0 483280.0 509750.0 507050.0 580830.0 628030.0 479990.0 True False 558962.2289958822 518874.4994482599 566155.1912220884 595865.8523953365 521311.38651294337 506568.4611678382 558307.5623311199 578815.2362967415 513995.5833479404 475737.662026569 1.1749379408281224 1.090673580977244 1.1900575388762678 1.2525093133409702 1.09579591469012 1.0648063031418087 1.1735618322770913 1.2166689385723173 1.080418105134663 1.0 18.859806715983094 S(ph)RS(ph)YT(ph)PEYR ddPTM_KYSE-520_SHP099_60min_R1 4 SRSYTPEYR 9 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 3 S(1)RS(0.949)Y(0.065)T(0.986)PEYR;S(0.995)RS(0.826)Y(0.196)T(0.983)PEYR;S(0.996)RS(0.698)Y(0.431)T(0.849)PEY(0.027)R;S(0.954)RS(0.723)Y(0.443)T(0.878)PEY(0.002)R 119.77 0.004275800000000001 3765870000.0 3040150.0 2814170.0 2489700.0 2647380.0 2646830.0 2791920.0 2733330.0 2837760.0 3174550.0 2725100.0 True False 2871506.819111224 2678973.049044714 2650190.045660849 2898986.199236182 2855120.4625973627 2774494.5916698594 3009641.671130105 2827916.4728981615 2598131.7438931307 2700957.734095721 1.0631439296004395 0.9918604113002281 0.9812038197436403 1.0733178689324292 1.057077060686866 1.0272262155922844 1.1142868446764982 1.0470050816418814 0.9619298040452245 1.0 21.365039633351877 -3.9370484168477846 19.077362800930512 1.0328482947615887 1.5443415824695694 0.04424359550886425 0.044209366109754 1462.170263734445 218778.30421498217 0.011061883221060727 46166.78100399243 0.00011559833614608735 3.9370484168477846 0.5114932877079807 S(ph)RSDIDVNAAAGAK ddPTM_KYSE-520_SHP099_60min_R1 3 SRSDIDVNAAAGAK 14 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 S(0.503)RS(0.497)DIDVNAAAGAK;S(0.725)RS(0.275)DIDVNAAAGAK;S(0.5)RS(0.5)DIDVNAAAGAK 255.22 1.2782e-19 10257560000.0 19569800.0 16503700.0 16366100.0 15873200.0 17408100.0 15907500.0 16381800.0 16902400.0 20721100.0 17215500.0 True False 18484224.18257087 15710837.479441246 17421084.992685862 17381784.155548397 18778018.43145999 15808215.391912479 18037832.214960955 16843769.51944981 16958670.57642311 17062984.063456316 1.0832937611515687 0.9207555619236055 1.0209870048461505 1.0186837244239626 1.1005119832278782 0.9264625304180429 1.0571323367518384 0.9871526256373881 0.993886562476688 1.0 24.02436663894978 -9.507796792220658 13.955078086649397 0.9999999990685705 1.0105377658821952 0.003453824311789977 0.05629299124203372 0.0 0.0 0.05121630959036752 0.012421779658554125 3.1060125614039943e-10 9.507796792220658 0.010537766813624727 S(ph)RSDIDVNAAASAK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSDIDVNAAASAK 14 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.684)RS(0.316)DIDVNAAASAK 132.31 0.00019238 874790000.0 1357200.0 1251200.0 1157600.0 1099300.0 1278800.0 1146900.0 1092400.0 1177600.0 1383700.0 1079500.0 True False 1281913.410488877 1191090.4739105124 1232220.7482254882 1203777.1414834035 1379434.2846233072 1139741.7716790456 1202830.4527965991 1173515.1804539075 1132454.960238434 1069936.469838291 1.1981210535636981 1.1132347643879572 1.1516765555357924 1.125092167075435 1.2892674691533725 1.0652424735566823 1.1242073587587809 1.0968082811788546 1.0584319650395615 1.0 20.029093704856855 -7.6117916577467035 0.7602548670075281 1.0024904657669171 1.1630407115058807 0.49228693221849196 0.054042888547688225 0.5423397208900469 0.6580349513814987 0.05102214602242007 0.021133372587364082 2.4446030104958187e-08 7.6117916577467035 0.1605502457389636 S(ph)RSDVDMDPSSATAVLGPAR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSDVDMDPSSATAVLGPAR 20 1 M0QYC1;M0QZR4;M0QZH8;M0QYS3 M0QYC1 ARHGEF1 1 S(0.5)RS(0.5)DVDMDPSSATAVLGPAR 169.01 3.8705e-09 614860000.0 214250.0 194880.0 192410.0 167370.0 177150.0 182750.0 186180.0 191250.0 241300.0 164030.0 True False 202365.12540321372 185517.6722791563 204813.0564668849 183276.7944783747 191090.69715437834 181609.38946232945 205000.8913416981 190586.59838808564 197486.00267798975 162576.82181340878 1.2447354004463835 1.1411077557665446 1.2597924733819137 1.127324254675882 1.1753870879189363 1.1170681493009167 1.260947834107496 1.1722864075103152 1.214724217604934 1.0 17.310762064946914 -9.9501607872154 4.264219715670816 0.9999939430251158 1.1880598441124932 0.5587215362234741 0.050718702609023246 23317229.668932486 30130122.89318155 1884.3910475875634 0.012345876903974587 1.1216031305090691e-10 9.9501607872154 0.18806590108737742 S(ph)RSESDVSSVEQDSFIEPYATTSQLRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSESDVSSVEQDSFIEPYATTSQLRPR 28 2 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 S(0.491)RS(0.491)ES(0.019)DVSSVEQDSFIEPYATTSQLRPR 158.62 3.8549e-10 561050000.0 51079.0 51572.0 46513.0 50628.0 40217.0 40173.0 34867.0 72242.0 55600.0 44723.0 True False 48245.54604653794 49094.4037088498 49511.302403431335 55439.66989813675 43381.84909657147 39922.26540558231 38391.696629127626 71991.4093634095 45504.441561940446 44326.7890139675 1.0884060659421015 1.1075560581069839 1.1169611764080223 1.2507034940127866 0.9786824189521539 0.9006351755594723 0.8661059707489819 1.6241061210349526 1.0265675131036869 1.0 15.43589123852438 -7.9791708355276665 24.99903419216185 0.9999974349343616 1.1147120198208376 0.04124424063018994 0.2012118824349978 754.1969709803103 905181.4825550318 0.19918653424912217 0.051429742055148144 1.0491296583274682e-08 7.9791708355276665 0.11471458488647601 S(ph)RSESETSTMAAK ddPTM_KYSE-520_SHP099_60min_R1 3 SRSESETSTMAAK 13 1 Q96B23;A0A087WVF1;Q96B23-2 Q96B23 C18orf25 Uncharacterized protein C18orf25 1 S(0.5)RS(0.5)ESETSTMAAK;S(0.465)RS(0.344)ES(0.175)ET(0.006)S(0.006)T(0.004)MAAK;S(0.443)RS(0.443)ES(0.114)ETSTMAAK 152.07 4.6213999999999995e-05 1581720000.0 3676930.0 3404360.0 3227940.0 3281510.0 3652490.0 3473880.0 3388530.0 3487430.0 4282950.0 3503840.0 True False 3472963.3631217675 3240809.435551459 3436018.1772866086 3593383.7237780406 3939920.1831746846 3452198.2263496406 3731075.681265889 3475332.919302285 3505274.2443833263 3472798.7035462745 1.0000474140857416 0.9331981816976844 0.9894089668306697 1.0347227209307093 1.1345086541156 0.9940680474294127 1.07437142194734 1.0007297329826295 1.0093514031791964 1.0 21.727667358445565 -5.157696672958894 3.7563334540992166 1.0394731006822773 0.9660157268067739 0.30074980840967436 0.043146697496097744 0.26829446822766034 6.853766834243112 0.011964888869352711 0.02200097735648268 6.955099173782015e-06 5.157696672958894 -0.07345737387550333 S(ph)RSFSSSAEEHS ddPTM_KYSE-520_SHP099_60min_R1 1 SRSFSSSAEEHS 12 1 Q96EQ0 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta 1 S(0.484)RS(0.484)FS(0.031)SSAEEHS 90.70700000000001 0.0017612 24880000.0 21165.0 27137.0 26099.0 34151.0 23733.0 26606.0 23208.0 25210.0 25504.0 21497.0 True False 19990.935258618516 25833.297786532574 27781.38329987648 37396.70077212743 25600.65207770173 26439.9420850054 25554.091128252905 25122.552394058217 20873.116503520316 21306.55330441292 0.9382528921032987 1.2124578488807993 1.3038891322756798 1.7551736424859476 1.2015388745395734 1.2409300419101235 1.1993535868121972 1.1790997837672292 0.9796571132505588 1.0 14.379009611205742 -7.451657730141792 1.2224071346536514 0.9812400181437898 1.2938827225115195 0.2404122027250739 0.1906136450846314 0.7110959691914512 1.8809256150760445 0.18314013600427884 0.06447597616554154 3.534616250928047e-08 7.451657730141792 0.3126427043677297 S(ph)RSFTLDDESLK ddPTM_KYSE-520_SHP099_60min_R1 5 SRSFTLDDESLK 12 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.497)RS(0.497)FT(0.006)LDDESLK;S(0.714)RS(0.286)FTLDDESLK;S(0.551)RS(0.449)FTLDDESLK;S(0.695)RS(0.305)FTLDDESLK;S(0.497)RS(0.497)FT(0.006)LDDESLK 243.9 1.3053e-15 14844180000.0 11102300.0 11518400.0 11512110.0 11344690.0 11993170.0 13468100.0 13703050.0 14862100.0 18245510.0 15071750.0 True False 10486433.287113639 10965038.77452913 12254199.03062725 12422885.926694568 12936964.247197153 13384040.592161957 15088288.022880306 14810546.843940223 14932585.315877685 14938226.020644056 0.7019865191905511 0.734025496693909 0.8203249176771337 0.8316172154261567 0.8660308278452049 0.8959591703637183 1.0100455035309328 0.9914528554777933 0.9996223979501598 1.0 23.832505496195573 -5.57145528649223 0.4952362197797604 1.0220873568806 0.660308353221748 0.9505558352218886 0.024065473851158224 0.3135164026631532 0.13765648835161087 0.020810946521197627 0.05787944045944099 2.682530777791166e-06 5.57145528649223 -0.36177900365885196 S(ph)RSGEGEVSGLMR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSGEGEVSGLMR 13 1 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 S(0.5)RS(0.5)GEGEVSGLMR 55.261 0.048198000000000005 262290000.0 427020.0 339450.0 397530.0 340910.0 305120.0 378320.0 359610.0 374220.0 521450.0 358700.0 True False 403332.3493567339 323142.31247516244 423155.41987048875 373309.9839016713 329131.20810467924 375958.7645493212 395962.88825538766 372921.9181636049 426767.82468478184 355522.1970643769 1.1344786702128185 0.9089230296825849 1.1902362872545622 1.0500328445992178 0.9257683790840242 1.0574832391723876 1.113750116096655 1.048941307302051 1.2003971290926287 1.0 18.43958011190451 -6.545924049580797 11.924642386538975 1.093561919374046 1.0380473026050132 0.05841604189707006 0.0918966729596931 2.1240159881005827 1087.7007752371276 0.03400707053211119 0.026428844008797393 2.844958596857142e-07 6.545924049580797 -0.0555146167690328 S(ph)RSGS(ph)S(ph)PGLR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSGSSPGLR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.778)RS(0.223)GS(0.999)S(1)PGLR 91.712 0.0081452 576230000.0 815500.0 734040.0 661990.0 746520.0 660830.0 760230.0 703710.0 678620.0 934000.0 681010.0 True False 770262.5893410533 698775.6165834975 704662.9346214496 817469.0363505776 712833.5613916327 755485.1225769998 774847.8743477608 676266.0256110991 764409.1442239643 674976.7812177619 1.1411690161421273 1.0352587467124408 1.043980999391015 1.211106898930268 1.0560860480349727 1.1192757196980738 1.147962264642372 1.0019100573963613 1.1324969472947686 1.0 19.364478349640084 -9.294595914186807 0.5869870315033114 0.9903570829332276 1.1001438803236956 0.18952816370907 0.060673000348717934 12.909316210518423 4.191981553788 0.34498742606911975 0.025053441567155107 5.074626532326057e-10 9.294595914186807 0.10978679739046804 S(ph)RSGS(ph)SPGLR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSGSSPGLR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.743)RS(0.257)GS(0.631)S(0.369)PGLR;S(0.531)RS(0.478)GS(0.792)S(0.199)PGLR 96.756 0.028014999999999998 295170000.0 611690.0 572750.0 561370.0 512890.0 523530.0 569650.0 517610.0 501590.0 673090.0 561040.0 True False 577758.3363262165 545234.2302847229 597556.8084237577 561634.9113939991 564728.8325217704 566094.6030490617 569935.0701867889 499850.10136198584 550873.8232181023 556069.6220825149 1.039003594842092 0.9805143252436398 1.0746078992516632 1.010008259920119 1.0155721695546436 1.0180282838127404 1.0249347339859118 0.8988984139971834 0.9906562080392847 1.0 19.08490599973265 -7.21100492642322 24.980057447858837 0.9585829265878361 1.0225668987226577 0.39945117500005367 0.03359466194103755 300.59176679754785 148882.48805992916 0.014751116694522112 0.008516552468652539 6.151698944852591e-08 7.21100492642322 0.06398397213482165 S(ph)RSHS(ph)PMS(ph)NR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSHSPMSNR 10 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 3 S(1)RS(0.044)HS(0.956)PMS(0.999)NR;S(0.999)RS(0.253)HS(0.78)PMS(0.968)NR 157.37 8.6847e-05 859310000.0 728440.0 752800.0 566240.0 780320.0 568690.0 629160.0 643660.0 685700.0 813750.0 593600.0 True False 688031.9810908617 716634.3580241624 602740.7364160332 854481.3781882381 613442.6675965197 625233.1790649478 708727.4343162383 683321.4667435834 665993.5129681475 588341.1658138124 1.169443889140672 1.2180591800556582 1.0244748649914763 1.45235694498156 1.0426648741261986 1.062705136738316 1.2046198285919765 1.161437455763258 1.1319852352111448 1.0 19.166293458567793 S(ph)RSIDKDR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSIDKDR 8 2 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.5)RS(0.5)IDKDR 62.408 0.019947 408830000.0 245500.0 202250.0 224790.0 209650.0 200530.0 241170.0 221510.0 216480.0 268160.0 227350.0 True False 231881.62560788303 192533.6064165608 239280.32307671677 229575.0729664291 216310.57014037506 239664.76857253068 243902.39252926994 215729.0814068116 219468.90376348855 225335.85587562344 1.0290489487650496 0.8544295166359667 1.0618830374194426 1.0188128829933996 0.9599474051735912 1.0635891373844037 1.082394950335354 0.9573668627592299 0.9739635217425263 1.0 17.781717370691528 -4.783190856527598 24.995679227095902 1.0155708712750857 0.9417390676951551 0.2071004993795711 0.057120786099868356 311.36044946092306 357799.40254240815 0.014775804292155987 0.030799982284411786 1.6474382436147497e-05 4.783190856527598 -0.07383180357993058 S(ph)RSKDSVPK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSKDSVPK 9 2 O15014 O15014 ZNF609 Zinc finger protein 609 1 S(0.611)RS(0.385)KDS(0.004)VPK 58.37 0.026964 774250000.0 1168100.0 1044600.0 715410.0 642430.0 1027800.0 976110.0 765610.0 878390.0 831400.0 803230.0 True False 1103303.1644503793 994415.8480234324 761526.473296471 703486.3540463767 1108682.012617952 970017.7354203805 843005.3304335447 875343.0701077682 680438.7178884405 796114.0071034832 1.3858607619083958 1.2490872402075108 0.9565545468382692 0.8836502658782308 1.3926171411701334 1.2184407343234853 1.058900261660597 1.099519745033184 0.8547000954851852 1.0 19.6026155204134 -4.557942887729294 5.158688093251587 1.073477476863896 1.357611736527977 0.3333097714144043 0.15096734050320726 0.20499752261427837 13.555446993292511 0.040976441025883395 0.12217147204724586 2.767305538387394e-05 4.557942887729294 0.284134259664081 S(ph)RSKEDS(ph)RR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSKEDSRR 9 3 P62995 P62995 TRA2B Transformer-2 protein homolog beta 2 S(0.977)RS(0.054)KEDS(0.969)RR 76.24 0.030822000000000002 691790000.0 1187600.0 863390.0 1105800.0 972600.0 892090.0 1337500.0 1302200.0 558050.0 1339500.0 927660.0 True False 1121721.4605780933 821911.4484251881 1177081.6373425566 1065035.611577147 962292.407702227 1329152.166379566 1433839.0842472808 556114.2547998495 1096280.5660471097 919441.6541085601 1.2200028740982511 0.8939245299062158 1.280213520980611 1.158350404093609 1.0466051906634715 1.4456079517826923 1.5594671808049116 0.6048390915452131 1.1923329350463274 1.0 19.81039850149493 -7.264239183892323 24.99992273890385 0.9239395455132161 1.2168160155783418 0.2726176816525042 0.22137733684462538 354.55294757887293 3165822.4818427386 0.11619127586507559 0.059726414824699876 5.4420285532563775e-08 7.264239183892323 0.29287647006512574 S(ph)RSPAPPADK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPAPPADK 10 1 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J7T7;A0A384DVL6 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 S(0.5)RS(0.5)PAPPADK 65.472 0.019511 699060000.0 693700.0 631330.0 632730.0 638670.0 611820.0 653510.0 641880.0 684850.0 791110.0 652280.0 True False 655219.078143334 600999.9591543505 673516.7882037953 699369.0047768628 659966.7532203873 649431.2016827746 706767.4945451119 682474.4151951913 647464.3662601926 646501.3066661605 1.0134845380624655 0.9296190942808009 1.0417872033034963 1.08177508315231 1.0208281814984483 1.0045319243540634 1.0932189730438884 1.0556427468252692 1.0014896483334246 1.0 19.302293760356154 -4.785360777240396 24.811509817508245 1.0412078157616886 0.971551832041113 0.342292083081404 0.03621096864702965 185.9950683548796 192915.76024690273 0.009308592388506886 0.019394182462913488 1.639227467903815e-05 4.785360777240396 -0.06965598372057569 S(ph)RSPAPPADKEAEKPVFFPAFAAEAQK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPAPPADKEAEKPVFFPAFAAEAQK 27 3 C9JE98;C9J0Q5;C9JQE8;C9J7T7;A0A384DVL6 C9JE98 NCOR2 1 S(0.582)RS(0.418)PAPPADKEAEKPVFFPAFAAEAQK 202.03 1.031e-15 1069000000.0 798130.0 690100.0 776170.0 644250.0 686220.0 655020.0 503640.0 594130.0 896800.0 642400.0 True False 753856.1378672902 656946.5601387812 826203.1601159087 705479.3262991741 740221.6099422945 650931.777212668 554552.8462527278 592069.1017009851 733963.7264882767 636708.8357796373 1.1839888116900534 1.0317848963637566 1.2976153520851321 1.1080093233437363 1.1625747411466465 1.0223382190316472 0.8709677251041896 0.9298898781198918 1.1527462558133856 1.0 19.280274259464303 -6.344345727970015 4.144858384911442 0.9787337253689765 1.1552989936752778 0.4381126419290924 0.09155506569731424 0.2159125919573648 6.880338822348693 0.03311465468862049 0.029181407418010837 4.5253718606932976e-07 6.344345727970015 0.17656526830630126 S(ph)RSPASAEAPGDSGER ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPASAEAPGDSGER 16 1 H7BY64;Q8NB15;Q8NB15-1 H7BY64 PRAP1;ZNF511 Zinc finger protein 511 1 S(0.5)RS(0.5)PASAEAPGDSGER 87.49 0.0016422000000000001 0.0 101060.0 92187.0 100410.0 112570.0 93312.0 82067.0 114950.0 97526.0 127540.0 91975.0 True False 95454.00034188452 87758.19814449192 106882.58926168038 123268.61895459531 100655.12352734599 81554.78941179212 126570.2678038897 97187.70506873942 104381.95102176061 91160.17305546717 1.047102008942049 0.9626813465030909 1.1724702321116347 1.3522201069055835 1.1041567841923856 0.8946317967405506 1.3884382133289388 1.0661202344318144 1.1450389739634275 1.0 16.476116042919962 -4.7660051041916525 24.99662377346683 1.1490998727844175 1.0048916628202138 0.12654095970740786 0.1409102744991642 201.74820385845385 1104565.466482968 0.03665689060070123 0.08062025660805942 1.7139371637683196e-05 4.7660051041916525 -0.1442082099642037 S(ph)RSPAYSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPAYSR 8 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.591)RS(0.408)PAYSR 57.836000000000006 0.028681 196490000.0 31272.0 33004.0 30386.0 27289.0 26087.0 23115.0 22485.0 22050.0 26989.0 21050.0 True False 29537.27982081353 31418.438299986014 32344.730179318987 29882.53835526298 28139.898485273858 22970.730710926106 24758.00323245287 21973.513696508682 22088.477937323933 20863.513376652183 1.4157385329868712 1.5059035231882647 1.5503012170287263 1.432286969878417 1.3487612549842392 1.1010001190227172 1.186665102156711 1.0532029433306602 1.0587132444357419 1.0 14.348694505013384 -6.136614929041575 1.3971175100336206 1.0664198057688685 1.4966582287835803 0.925200755873566 0.053859890763392135 0.10375455465050623 0.41101622047489883 0.02383162425465918 0.023860583456244314 7.301045768860534e-07 6.136614929041575 0.4302384230147118 S(ph)RSPES(ph)QVIGENTK ddPTM_KYSE-520_SHP099_60min_R1 4 SRSPESQVIGENTK 14 1 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 S(0.822)RS(0.178)PES(1)QVIGENTK;S(0.756)RS(0.244)PES(1)QVIGENTK;S(0.971)RS(0.03)PES(0.999)QVIGENTK;S(0.919)RS(0.106)PES(0.976)QVIGENTK 252.83 4.6399000000000004e-26 5355650000.0 7776520.0 6645390.0 6041300.0 6796590.0 6855590.0 6761580.0 6957160.0 7280810.0 7821080.0 6753870.0 True False 7345140.93349171 6326135.489466251 6430731.86442176 7442535.870130707 7395085.930028695 6719378.47113925 7660457.628138393 7255554.569463836 6400969.025382394 6694035.966231345 1.0972664279882751 0.9450405586971745 0.9606658668794362 1.111815937003511 1.1047275466301434 1.0037858333949425 1.1443705511566187 1.0838834159339927 0.9562196943178445 1.0 22.67444487179233 -5.255100445172139 24.917529500706056 1.0646323452515456 0.9953959129504968 0.12561360532816757 0.06656957697753532 850.6402536762694 3343749.7330011586 0.017982593165022796 0.03021561671964342 5.5577570062406205e-06 5.255100445172139 -0.06923643230104881 S(ph)RSPES(ph)QVIGENTKQP ddPTM_KYSE-520_SHP099_60min_R1 3 SRSPESQVIGENTKQP 16 2 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 S(0.99)RS(0.289)PES(0.721)QVIGENTKQP;S(0.939)RS(0.061)PES(1)QVIGENTKQP;S(0.973)RS(0.027)PES(1)QVIGENTKQP 206.45 1.4002e-12 1552630000.0 3269250.0 3393300.0 3118660.0 2485030.0 2837500.0 2840780.0 2443080.0 2264010.0 4029000.0 2550970.0 True False 3087898.1854116945 3230280.7745528575 3319693.8136324314 2721206.5040484895 3060795.106833465 2823049.638286161 2690050.368563086 2256156.677733904 3297435.1628247867 2528370.3904246264 1.2212997736036209 1.2776137494674382 1.312977650032876 1.0762689336792453 1.2105801896847166 1.1165490819610668 1.0639463184471585 0.8923362994118099 1.3041740938403412 1.0 21.269776394107648 -5.768211164626359 0.8917024432659364 1.060147919190006 1.2728039255213999 0.3297678575185494 0.1092749835030605 0.685315915535245 1.1779851200378426 0.053785712088393105 0.08688443413544672 1.7052530515494907e-06 5.768211164626359 0.2126560063313938 S(ph)RSPESQVIGENT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPESQVIGENTK 14 1 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 S(0.813)RS(0.409)PES(0.083)QVIGENT(0.695)K 146.26 6.724500000000001e-06 2774700000.0 3641600.0 3074400.0 2929600.0 3475500.0 3434200.0 3474900.0 3622200.0 3789800.0 3969600.0 3279500.0 True False 3439593.1886503724 2926701.209231516 3118446.7035257295 3805810.475052825 3704452.0020748884 3453211.860151296 3988367.325265325 3776654.06834597 3248820.7054726435 3250446.1814123937 1.0581910902938838 0.9003998361725826 0.9593903511950143 1.170857864626792 1.1396749231716916 1.062380875554382 1.2270214926408312 1.1618878940198072 0.9994999222109735 1.0 21.632206336551143 -5.2508298179470305 24.594651904175745 1.119788920616253 0.9654343469549729 0.3821564874095954 0.07826811986405012 523.2485193060129 1212969.9999124717 0.020799970297748775 0.035519840115884056 5.612678706205649e-06 5.2508298179470305 -0.15435457366128014 S(ph)RSPGRPPK ddPTM_KYSE-520_SHP099_60min_R1 3 SRSPGRPPK 9 2 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.882)RS(0.118)PGRPPK;S(0.758)RS(0.242)PGRPPK;S(0.948)RS(0.052)PGRPPK 62.088 0.02508 8057000000.0 751280.0 929230.0 668060.0 1090340.0 898180.0 826460.0 1099840.0 1053480.0 992580.0 694650.0 True False 709605.0007604497 884588.3959973343 711124.2165337929 1193965.5857773258 968861.6560548653 821301.7565802292 1211022.5606040005 1049825.7237640792 812352.4929055908 688495.9414295224 1.0306596714093894 1.2848127966603051 1.0328662432741251 1.7341650312393972 1.407214767371352 1.1928926623372136 1.7589392874118581 1.5248103301587062 1.1798943813944718 1.0 19.39308862437184 -5.231337953202782 24.861288946873515 1.42823367780742 1.1329828683989052 0.22576378660368412 0.23594845570921655 924.3275402875297 763416.931283743 0.06212828972016274 0.10759044274299176 5.870323661149552e-06 5.231337953202782 -0.2952508094085149 S(ph)RSPGS(ph)YK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPGSYK 8 1 Q86X95 Q86X95 CIR1 Corepressor interacting with RBPJ 1 2 S(0.98)RS(0.041)PGS(0.975)Y(0.004)K;S(0.996)RS(0.162)PGS(0.835)Y(0.006)K 110.64 0.0035450000000000004 2366000000.0 6234000.0 5575400.0 5082400.0 5665700.0 5436200.0 5432900.0 4857700.0 5645100.0 6533300.0 5283400.0 True False 5888187.592829097 5307549.41515399 5410019.636127518 6204166.424545178 5863998.012253069 5398991.255868077 5348763.722583333 5625518.465676243 5347017.41109039 5236593.186423003 1.1244309770129735 1.01355007467736 1.0331181826677238 1.184771511491635 1.1198116415567183 1.031012160705194 1.0214205175324973 1.0742706690032011 1.0210870351650927 1.0 22.320197100266302 -6.278119740238136 23.797107301054563 1.033691385816178 1.0921381620190067 0.3145233146362425 0.04811178784884979 677.9322476759987 967170.1933836817 0.01825877458201094 0.016151200816098266 5.270845178146251e-07 6.278119740238136 0.058446776202828676 S(ph)RSPIIHS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 SRSPIIHSPK 10 1 E9PQ01;E9PKN0;O94913 E9PQ01 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 2 S(0.605)RS(0.408)PIIHS(0.988)PK;S(0.5)RS(0.5)PIIHS(1)PK;S(0.619)RS(0.383)PIIHS(0.998)PK;S(0.813)RS(0.187)PIIHS(1)PK;S(0.765)RS(0.235)PIIHS(1)PK;S(0.5)RS(0.5)PIIHS(1)PK;S(0.614)RS(0.386)PIIHS(1)PK;S(0.999)RS(0.015)PIIHS(0.986)PK;S(0.998)RS(0.003)PIIHS(1)PK 143.46 0.0007041 23624270000.0 33204060.0 30678020.0 28623640.0 33197480.0 31870590.0 30387500.0 29626810.0 31284530.0 37715000.0 29662450.0 True False 31362164.601147383 29204201.870553218 30468765.633843303 36352558.51801371 34378624.11414827 30197840.34082924 32621777.084601607 31176011.267294195 30866906.717780296 29399663.77003686 1.0667524923570941 0.9933515600378107 1.036364424850873 1.2364957232967746 1.1693543294595699 1.027149173440747 1.1095969443653506 1.0604206738944997 1.0499067934660804 1.0 24.809296319950924 -9.760194768022663 12.371046071054154 0.9999999988169234 1.0847326227897653 0.11700460781822308 0.0685157905746062 0.0 0.0 0.07210282121380995 0.017487502809974367 1.7370216520380144e-10 9.760194768022663 0.08473262397284198 S(ph)RSPIIHSPK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPIIHSPK 10 1 E9PQ01;E9PKN0;O94913 E9PQ01 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 S(0.938)RS(0.062)PIIHSPK 88.441 0.0025634 700540000.0 986580.0 1093400.0 1060700.0 984750.0 951650.0 862880.0 898880.0 852030.0 1317300.0 889700.0 True False 931852.4407015283 1040871.4227731393 1129074.419180005 1078340.343924116 1026539.4408521826 857494.4458509156 989747.5626234034 849074.5067952976 1078111.5264306495 881817.9501761259 1.056740158799681 1.1803699647588775 1.2803940075777485 1.2228605050608674 1.1641171974863422 0.9724166373338714 1.1223944380194582 0.9628682503295738 1.2226010212372267 1.0 19.75012131900955 -6.083884559823511 7.0860422795008695 1.0582246448773904 1.191838191401197 0.3333055885859557 0.08842502990547833 0.30167729237082 22.021866755824053 0.02847364987335687 0.028575423940949866 8.243572089664718e-07 6.083884559823511 0.13361354652380664 S(ph)RSPIQR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPIQR 7 1 Q9Y252 Q9Y252 RNF6 E3 ubiquitin-protein ligase RNF6 1 S(0.615)RS(0.385)PIQR 63.816 0.023879 781570000.0 67005.0 137150.0 40610.0 81998.0 174840.0 111590.0 57880.0 72789.0 122760.0 47480.0 True False 63288.09907884402 130561.10813365314 43227.7855782974 89791.06526640235 188598.91329648055 110893.52541779114 63731.07525436392 72536.51194808037 100469.87852776636 47059.36413888105 1.3448566557777728 2.7743916757638862 0.9185798909378389 1.9080382174610775 4.007680867507891 2.35646034422657 1.3542697913699282 1.541383171562018 2.1349603923941856 1.0 15.522194206701533 -6.756713859663939 24.81300308915434 1.552768570907195 2.251759775486663 0.1502902352006048 0.8227626550164202 232.70335942018286 1221898.9134784024 0.3374189268743181 0.2526014524185903 1.7509999768275418e-07 6.756713859663939 0.6989912045794682 S(ph)RSPITTNHRPSPDPEQRPLR ddPTM_KYSE-520_SHP099_60min_R1 6 SRSPITTNHRPSPDPEQRPLR 21 3 P41212 P41212 ETV6 Transcription factor ETV6 1 S(0.499)RS(0.499)PIT(0.001)T(0.001)NHRPSPDPEQRPLR;S(0.5)RS(0.5)PITTNHRPSPDPEQRPLR;S(0.499)RS(0.499)PIT(0.001)T(0.001)NHRPSPDPEQRPLR;S(0.5)RS(0.5)PITTNHRPSPDPEQRPLR;S(0.499)RS(0.499)PIT(0.001)T(0.001)NHRPSPDPEQRPLR;S(0.5)RS(0.5)PITTNHRPSPDPEQRPLR 111.58 9.070000000000001e-05 26850100000.0 3270510.0 3546320.0 3611850.0 5138140.0 3101740.0 3205340.0 3120930.0 2965440.0 3668940.0 2439590.0 True False 3089088.290699948 3375949.464065155 3844675.6301643276 5626467.280761883 3345829.2915135263 3185334.2840994974 3436424.0617415677 2955153.5807788963 3002752.982450824 2417977.1305723004 1.2775506648273407 1.396187507888512 1.590038045254112 2.3269315534966117 1.3837307430288295 1.3173550087901678 1.4211979171731106 1.2221594420454482 1.2418450714379237 1.0 21.205369168846712 -5.984138161362948 24.99084866061416 1.2751173620191127 1.6543131606108636 0.3213132757156666 0.27710112244909174 327.00351037746384 515202.0315815983 0.09113127199039023 0.10330342738043223 1.0371984011686148e-06 5.984138161362948 0.3791957985917509 S(ph)RSPLAIR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPLAIR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.5)RS(0.5)PLAIR 71.555 0.013872999999999998 470210000.0 95107.0 97919.0 105490.0 93911.0 100120.0 114150.0 96958.0 109780.0 136900.0 94204.0 True False 89831.22511889592 93214.8242605845 112290.05418996765 102836.2732046284 107998.87439512488 113437.54750820735 106759.46085889117 109399.19880284475 112042.41096815922 93369.42584960305 0.9621053605234077 0.9983441947124364 1.2026426548969191 1.101391298799184 1.1566835011825665 1.2149324736228913 1.1434092036814751 1.1716811772952531 1.1999903603202413 1.0 16.51066259119507 -4.686965776983006 5.934235489382908 1.1555560527062 0.973604165069436 0.5597026127712178 0.059735581512525726 0.12708858362034198 7.524643830575064 0.01420850528367021 0.03840903043849642 2.056052609442739e-05 4.686965776983006 -0.18195188763676406 S(ph)RSPLAR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPLAR 7 1 Q8N3Y1 Q8N3Y1 FBXW8 F-box/WD repeat-containing protein 8 1 S(0.5)RS(0.5)PLAR 50.126999999999995 0.051421 2076200000.0 108290.0 103960.0 109800.0 73782.0 95919.0 101370.0 100290.0 103310.0 117500.0 84534.0 True False 102282.93782923697 98965.60555285859 116877.88368621163 80794.21909663273 103467.27959554504 100737.31222870783 110428.29193607728 102951.64172273519 96164.96193395686 83785.09452645679 1.2207772564717836 1.1811839100045207 1.394972272177901 0.9643030130033496 1.2349127273810405 1.2023297556452366 1.3179944781372466 1.2287584361467325 1.147757396198806 1.0 16.354405989041517 -8.094089975637987 3.241497064774043 1.0001936458538385 1.2172758453365702 0.29042011076736207 0.10382348061222907 0.4966512125393192 11.69010454823476 0.09765843517806942 0.025943444092617958 8.05211602944982e-09 8.094089975637987 0.21708219948273166 S(ph)RSPLELEPEAK ddPTM_KYSE-520_SHP099_60min_R1 4 SRSPLELEPEAK 12 1 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.5)RS(0.5)PLELEPEAK;S(0.582)RS(0.418)PLELEPEAK;S(0.653)RS(0.347)PLELEPEAK;S(0.5)RS(0.5)PLELEPEAK 161.19 2.3913999999999997e-06 9548900000.0 6211200.0 5731730.0 5224070.0 5107630.0 5318650.0 5458990.0 5330510.0 5621450.0 6549260.0 5202210.0 True False 5866652.354279767 5456369.087297874 5560821.911007536 5593057.619535046 5737197.496021076 5424918.418500471 5869369.971564265 5601950.502006287 5360079.477409248 5156122.466658134 1.1378031441681704 1.058231087911754 1.078489106293804 1.084741034702402 1.112696126424545 1.0521314133984396 1.1383302102536001 1.0864657575980947 1.0395562774294045 1.0 22.297855099886053 -7.926268781184639 2.849980799531425 1.0009807015846832 1.09262399719404 0.5539811726205517 0.027658925221970988 0.17174053746507376 2.938768348579761 0.025340124855413166 0.006854625471663088 1.1850351129535526e-08 7.926268781184639 0.09164329560935669 S(ph)RSPLGFYVHLK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPLGFYVHLK 12 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.625)RS(0.375)PLGFYVHLK 92.773 0.0015813 709880000.0 479850.0 431460.0 451460.0 396370.0 431850.0 445670.0 434070.0 370960.0 412570.0 353370.0 True False 453231.76394273987 410732.0139653364 480561.8339615404 434040.88562701386 465834.1381096147 442888.40821710706 477950.0317149579 369673.226342715 337657.68804334145 350239.4167176996 1.2940626962842798 1.172717844880364 1.3720952326416287 1.2392690968214466 1.330044866095374 1.264530452819034 1.3646380415834114 1.0554872144521628 0.9640767769879559 1.0 18.41798193143245 -7.389529828093498 4.551418305399111 0.9901489139739258 1.2875570948491044 0.8410314668159269 0.05710756436093287 0.08189573628192445 2.63786977823426 0.03222461333076565 0.014542729445905962 4.0782155092239036e-08 7.389529828093498 0.2974081808751786 S(ph)RSPLHPMSEIPR ddPTM_KYSE-520_SHP099_60min_R1 3 SRSPLHPMSEIPR 13 1 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 S(0.557)RS(0.443)PLHPMSEIPR;S(0.699)RS(0.3)PLHPMSEIPR;S(0.679)RS(0.32)PLHPMSEIPR 126.26 4.1746e-05 2834050000.0 1574050.0 1773580.0 1614970.0 2316950.0 1617810.0 1693840.0 1655850.0 1563030.0 1900550.0 1580220.0 True False 1486734.308709117 1688374.5546021461 1719073.5502433635 2537152.2313835844 1745122.442920266 1683268.116261955 1823239.4775386755 1557608.213743944 1555458.0289666548 1566220.4801925565 0.9492496921802048 1.0779928981611655 1.09759358403487 1.6199202241766486 1.1142252735104796 1.074732540884032 1.1641014152199824 0.9945012426043913 0.9931283932485812 1.0 20.57885588750266 -7.167467609750525 1.4972397046896055 0.983144632619058 1.1744228124712452 0.15394592033525745 0.16716909799097274 0.8451467744643465 3.4795669030957797 0.13669815047577244 0.05663682580570759 6.800367611415625e-08 7.167467609750525 0.1912781798521872 S(ph)RSPLLVTVVESDPRPQGQPR ddPTM_KYSE-520_SHP099_60min_R1 8 SRSPLLVTVVESDPRPQGQPR 21 2 A0A2R8YH03;Q5VWN6;Q5VWN6-2 A0A2R8YH03 FAM208B Protein FAM208B 1 S(0.5)RS(0.5)PLLVTVVESDPRPQGQPR;S(0.5)RS(0.5)PLLVTVVESDPRPQGQPR;S(0.5)RS(0.5)PLLVTVVESDPRPQGQPR;S(0.5)RS(0.5)PLLVTVVESDPRPQGQPR;S(0.5)RS(0.5)PLLVTVVESDPRPQGQPR;S(0.5)RS(0.5)PLLVTVVESDPRPQGQPR;S(0.5)RS(0.5)PLLVTVVESDPRPQGQPR;S(0.5)RS(0.5)PLLVTVVESDPRPQGQPR 116.08 7.256399999999999e-05 24651300000.0 7174483.0 6842888.0 6462609.0 5941477.0 6511093.0 5771247.0 5770991.0 6836390.0 7878349.0 6714413.0 True False 6776500.126012725 6514145.389095709 6879199.116679997 6506153.18770981 7023478.976048496 5735226.5067376215 6354379.089724552 6812676.158715421 6447839.418616405 6654928.52455427 1.0182679049083547 0.9788452821184896 1.0336999249951746 0.9776443373816063 1.0553800766055426 0.861801368050268 0.9548380671977468 1.0237038810528347 0.9688818437081959 1.0 22.665991740671732 S(ph)RSPNRFDAHDPR ddPTM_KYSE-520_SHP099_60min_R1 5 SRSPNRFDAHDPR 13 2 Q96T58;A0A669KB49;F6WRY4 Q96T58 SPEN Msx2-interacting protein 1 S(0.565)RS(0.435)PNRFDAHDPR;S(0.5)RS(0.5)PNRFDAHDPR;S(0.5)RS(0.5)PNRFDAHDPR;S(0.5)RS(0.5)PNRFDAHDPR;S(0.5)RS(0.5)PNRFDAHDPR 72.819 0.012223000000000001 13737850000.0 6004010.0 5389170.0 6267050.0 6040520.0 5632940.0 5368420.0 5183470.0 5246030.0 7081310.0 4056310.0 True False 5670955.596602798 5130266.183890912 6671034.070634544 6614609.204651443 6076220.330955593 5334913.699465715 5707465.733392147 5227832.746362613 5795522.60929828 4020374.2491614264 1.4105541537048825 1.2760668201376992 1.6593067354428495 1.6452720057171606 1.5113568922651857 1.3269694234506841 1.4196354318463302 1.300334850033685 1.4415380882780044 1.0 21.938898374777644 -9.052997233943538 0.41613899419748834 0.9278115115662683 1.4912729636822881 0.5644598877768265 0.12036513207964966 3.776100831130036 0.8377139478224243 0.5921495903045225 0.08689933054534846 8.851212472212492e-10 9.052997233943538 0.5634614521160198 S(ph)RSPPPVS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 5 SRSPPPVSK 9 1 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 2 S(0.999)RS(0.003)PPPVS(0.998)K;S(0.974)RS(0.186)PPPVS(0.84)K;S(0.999)RS(0.316)PPPVS(0.685)K;S(0.981)RS(0.043)PPPVS(0.976)K;S(0.993)RS(0.11)PPPVS(0.897)K 112.08 0.0029806 131195400000.0 25303600.0 22141700.0 20621840.0 21753860.0 22756790.0 21841070.0 20943880.0 22846400.0 24181820.0 21906710.0 True False 23899958.86652399 21077979.49663073 21951156.802510623 23821340.313863527 24547619.9045768 21704751.78059646 23061091.782971077 22767151.17078986 19791011.062074866 21712633.592562478 1.100739749723901 0.9707702848101694 1.010985457334381 1.0971188829909317 1.1305685144056146 0.9996369941982203 1.0621047734564315 1.0485670047224764 0.9114974918958771 1.0 24.3720313897268 -7.7420574177306145 24.057401719325714 0.9557488119178512 1.0510886998196254 0.36866157245281617 0.050647511086465015 146.54658313249234 181899.47512423512 0.03501503124824983 0.013183529819447417 1.811100632605612e-08 7.7420574177306145 0.09533988790177417 S(ph)RSPPPVSK ddPTM_KYSE-520_SHP099_60min_R1 4 SRSPPPVSK 9 1 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(0.5)RS(0.5)PPPVSK;S(0.662)RS(0.338)PPPVSK;S(0.5)RS(0.5)PPPVSK;S(0.5)RS(0.5)PPPVSK 108.56 0.00072926 13848600000.0 6851600.0 6196000.0 4601630.0 6167300.0 6298300.0 7809000.0 6431400.0 7434300.0 10516600.0 5669100.0 True False 6471528.089674017 5898334.859614394 4898258.432668316 6753438.337733635 6793940.377575047 7760261.134398519 7081548.676415282 7408512.14847867 8607050.541911915 5618876.184493062 1.1517477654222206 1.049735688409113 0.8717505550641066 1.2019197640218038 1.2091279740822407 1.3811055591178958 1.2603140635059542 1.3185042533815985 1.5318099668516627 1.0 22.42185017927464 -5.632245867487106 2.3836452091259557 1.309347415915982 1.0286989487242773 0.3818694663086275 0.14352700094887838 0.2756903031317306 3.184544595269357 0.044576875099471155 0.061856089423072046 2.332137393647431e-06 5.632245867487106 -0.28064846719170466 S(ph)RSPPRPK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPPRPK 8 2 Q8WUQ7-2;Q8WUQ7 Q8WUQ7-2 CACTIN Cactin 1 S(0.777)RS(0.223)PPRPK 47.097 0.062749 6747700000.0 196820.0 180970.0 145590.0 182410.0 167230.0 170490.0 176660.0 186590.0 185130.0 154340.0 True False 185902.00224905735 172275.92955849215 154974.96435223636 199746.1915564336 180390.0495914574 169425.90866994564 194518.51683545145 185942.7628404335 151515.0587475187 152972.667674703 1.2152628641109842 1.126187652848139 1.0130892446864512 1.3057639288947662 1.179230592847198 1.1075567370651502 1.2715900153424524 1.2155293208054758 0.9904714420599376 1.0 17.22291437746769 -7.768005347363271 24.980264048959537 0.9952355759674744 1.1768683108635032 0.46299595107914104 0.07924789799269498 151.81836446877858 577567.129705167 0.0718444798149541 0.020289944207646037 1.7060613825512347e-08 7.768005347363271 0.18163273489602882 S(ph)RSPPTSELMMK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPPTSELMMK 12 1 F6VUX8;Q9HC77-2;Q9HC77 F6VUX8 CENPJ Centromere protein J 1 S(0.497)RS(0.497)PPT(0.005)SELMMK;S(0.5)RS(0.5)PPTSELMMK 127.75 5.4334e-05 1484640000.0 1830900.0 1695010.0 1520680.0 1672920.0 1720720.0 1771480.0 1509570.0 1664850.0 2024050.0 1710070.0 True False 1729336.3271913372 1613579.1753381216 1618705.4659740268 1831913.8138182608 1856130.874442459 1760423.5362228607 1662172.0675834513 1659075.0239289093 1656533.5421483007 1694920.1102143286 1.0203055098406122 0.9520089859185628 0.9550334887284663 1.0808260535575385 1.0951140783902462 1.0386469106206127 0.9806787102037887 0.9788514596827301 0.977351989728192 1.0 20.692785843090594 -10.12669061882879 13.504426313656028 1.000000000622672 1.0093415072676237 0.002928311750224122 0.04738870897683271 0.0 0.0 0.051774266488310385 0.01255710408354003 7.469807003927487e-11 10.12669061882879 0.009341506644951814 S(ph)RSPQAFR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPQAFR 8 1 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 S(0.5)RS(0.5)PQAFR 100.69 0.0017045 1576000000.0 172250.0 145230.0 133870.0 118510.0 128840.0 113400.0 131170.0 162520.0 147450.0 132090.0 True False 162694.94912813816 138252.93280532587 142499.47439957317 129773.15476866919 138978.97500067804 112692.2285364058 144429.9436958348 161956.25605245295 120676.79691201642 130919.7853644651 1.2427071177608089 1.0560125226331998 1.0884487321978995 0.9912417317779446 1.0615582252428624 0.8607730926435913 1.1031941680454107 1.2370647843760667 0.9217613409315222 1.0 16.998323616717677 -3.591823395201237 1.3589396056271108 1.0353345040783482 1.9912769964280608 0.29097265622394053 0.09762464453120367 9.613817471795247 4.237953115906616 0.02835751883836139 19.760522592958484 0.0002559626541232499 3.591823395201237 0.9559424923497126 S(ph)RSPQRPGWS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPQRPGWSR 11 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.944)RS(0.056)PQRPGWS(1)R 100.13 0.0082435 9264200000.0 7530400.0 6434100.0 5747000.0 6026600.0 6804400.0 6018400.0 6439000.0 6826700.0 7181000.0 5865800.0 True False 7112673.700519777 6124996.178219005 6117460.815525117 6599366.252036645 7339867.568259953 5980836.933187881 7089916.958584122 6803019.771063753 5877111.418278681 5813833.575523346 1.2234051092319946 1.0535210715362884 1.052224962420676 1.1351144070962829 1.2624832604705643 1.0287251699752176 1.2194908688878159 1.170143534845055 1.0108840134368036 1.0 22.47105834337768 -7.771366093243135 24.09176292622497 1.005441766153408 1.1395628284079087 0.34715309520230886 0.07540406386903722 168.03805685293852 407799.31398819794 0.0691999015963664 0.01879897132318324 1.692910141839244e-08 7.771366093243135 0.1341210622545006 S(ph)RSPS(ph)HTRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPSHTRPR 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.973)RS(0.082)PS(0.617)HT(0.327)RPR 51.93899999999999 0.055572 4223700000.0 2466800.0 2525300.0 1968500.0 2594000.0 2169600.0 2265400.0 2216500.0 2494000.0 2432400.0 1712700.0 True False 2329961.686556116 2403980.79744742 2095392.659711363 2840532.980085465 2340335.176664631 2251260.798292535 2440565.4509553863 2485348.8961039768 1990737.4758140994 1697526.8104604355 1.3725625257866412 1.4161666152391237 1.2343797145348243 1.6733361515009013 1.3786734690981646 1.3262004372596066 1.4377183534988822 1.4640999369134284 1.1727281498865598 1.0 20.69500292966332 -7.951097155445418 3.6878515770865365 1.0021056256695566 1.4119984457598382 0.6166203790291667 0.10702451439624656 0.12593861938195564 3.651981698017744 0.10131934539273424 0.026800855760359718 1.1191874835049042e-08 7.951097155445418 0.4098928200902816 S(ph)RSPS(ph)S(ph)PELNNK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPSSPELNNK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)RS(0.096)PS(0.904)S(1)PELNNK;S(0.792)RS(0.485)PS(0.724)S(0.999)PELNNK 162.7 1.9066e-05 479870000.0 3923750.0 3607500.0 3209540.0 3591090.0 3296790.0 3533380.0 3334760.0 3772730.0 4228550.0 3468020.0 True False 3706091.765698299 3434190.285032107 3416432.0838455725 3932386.113899421 3556228.616830841 3511326.8647792386 3671870.0849212655 3759643.2801918034 3460751.913070925 3437296.040878733 1.0781997598178505 0.9990964537794562 0.9939301250794137 1.1440347491553622 1.0346006205277865 1.0215375175777934 1.0682437710493404 1.0937793066059749 1.0068239313440677 1.0 21.7128426800728 S(ph)RSPS(ph)SPELNNK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPSSPELNNK 12 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.873)RS(0.143)PS(0.864)S(0.12)PELNNK 77.633 0.05121900000000001 308710000.0 1482600.0 1326600.0 1239300.0 1249200.0 1311000.0 1207600.0 1168600.0 1276500.0 1420400.0 1241600.0 True False 1400357.222510172 1262868.1447328033 1319187.2609501106 1367923.5924143249 1414168.2414303685 1200062.9204635234 1286733.4924369333 1272072.1194373386 1162491.165370149 1230600.3899501844 1.1379463503719998 1.0262211478609438 1.0719867080519228 1.1115904103278396 1.1491693428502936 0.9751849018283691 1.0456144032987194 1.0337004033363202 0.9446536624429378 1.0 20.230930924134118 -6.271425593889594 24.992779504457758 1.0047984309236295 1.094474453351644 0.5856477853489614 0.04166192068735476 584.2186420133137 1462134.798449219 0.015020370345043907 0.0133934189389504 5.3527185211568e-07 6.271425593889594 0.08967602242801442 S(ph)RSPSHT(ph)RPR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPSHTRPR 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.983)RS(0.03)PS(0.371)HT(0.615)RPR 78.508 0.035220999999999995 1398100000.0 781760.0 672720.0 471930.0 732740.0 620860.0 690900.0 688940.0 643930.0 708320.0 524050.0 True False 738394.214400077 640401.5214266938 502351.3629146975 802379.3892936861 669718.1497898238 686587.8368236586 758584.7786064534 641696.3571243917 579706.94329413 519407.3247047302 1.4216091673713598 1.2329466508597 0.9671626467729761 1.5447979863391768 1.2893891131984738 1.3218678369889494 1.4604814805753645 1.235439560828642 1.116093123299096 1.0 18.98650683354493 -7.834779631871622 2.464544843481237 1.0084642772761534 1.3117475299632568 0.3390768405251299 0.14712300355612032 0.32090245620567853 3.821863671897489 0.14142731801956027 0.03945427084824972 1.4629192953532608e-08 7.834779631871622 0.30328325268710343 S(ph)RSPSTESQLMSK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPSTESQLMSK 13 1 P35612;P35612-4;P35612-3;A0A1C7CYY0;P35612-5;P35612-6 P35612 ADD2 Beta-adducin 1 S(0.44)RS(0.44)PS(0.103)T(0.016)ESQLMSK 113.33 9.3856e-05 1079800000.0 949680.0 898110.0 826810.0 804920.0 872310.0 865520.0 802030.0 910300.0 1041500.0 813060.0 True False 896999.3572598542 854963.4475094067 880107.4955427733 881419.354791978 940955.8342350302 860117.9686316585 883107.0194584907 907142.3817656175 852389.8540784346 805856.9209511086 1.113100023017951 1.0609370289955944 1.0921386571998797 1.093766563116052 1.1676462778584464 1.0673333519509998 1.0958608116391282 1.1256866550143507 1.0577434181149747 1.0 19.620164186939455 -8.024942027313028 4.86507217543033 1.0000621738509818 1.1006851920630822 0.5569277374461871 0.028491759913200344 0.13015152461132035 10.973897994345243 0.02753361856213328 0.007182434198723255 9.441869045938182e-09 8.024942027313028 0.1006230182121004 S(ph)RSPTIK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPTIK 7 1 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.497)RS(0.497)PT(0.005)IK;S(0.768)RS(0.231)PT(0.001)IK 70.028 0.018526 1932050000.0 1752290.0 1744690.0 1582220.0 1484600.0 1632940.0 1831510.0 1493060.0 1561100.0 2122300.0 1522270.0 True False 1655086.9805964848 1660872.4735669196 1684212.4328415089 1625695.9376387342 1761443.0878423403 1820078.866725862 1643993.0756613775 1555684.9084634788 1736943.8188292484 1508783.8721081377 1.0969675718258614 1.1008021123968386 1.1162714978443233 1.0774876161469316 1.167458852394264 1.206321793579865 1.0896146930337476 1.0310853245599776 1.1512210933182336 1.0 20.524954729085845 -9.156918669723293 0.6064546636861678 0.9914799098068643 1.1192966719555633 0.342660066580898 0.04726037238796648 7.3103827350932 2.769978927275583 0.206827958789545 0.02066380485175087 6.967569834925017e-10 9.156918669723293 0.12781676214869897 S(ph)RSPVDLR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPVDLR 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.5)RS(0.5)PVDLR 89.54799999999999 0.0029473000000000004 614830000.0 576610.0 482770.0 401900.0 459490.0 544590.0 547630.0 476960.0 519870.0 616840.0 515060.0 True False 544624.2938564625 459577.0045474561 427807.11706273636 503159.79144929425 587446.1347067627 544212.0380369653 525175.7714810196 518066.69230856997 504837.405270995 510496.96911061683 1.0668511799498084 0.9002541295164337 0.838020875634302 0.9856273825207907 1.150733834385356 1.0660436221297975 1.0287539461712691 1.0148281452309913 0.9889136191161294 1.0 18.961542870090206 -5.523530153045367 24.99994726284352 1.0451730249697673 0.9282734042795073 0.33130449323694244 0.06790374489822779 23.921571486207263 918030.4887665418 0.02062260272843758 0.026868725453446138 2.995503607533897e-06 5.523530153045367 -0.11689962069025994 S(ph)RSPYSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPYSSR 8 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YCQ1 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 S(0.767)RS(0.229)PYS(0.003)SR 70.488 0.014702000000000002 444510000.0 81684.0 98478.0 91130.0 106970.0 131980.0 130270.0 109440.0 90229.0 126430.0 83628.0 True False 77152.82568698304 93746.96906150853 97004.38561315539 117136.39663829685 142366.07513652174 129456.93660879708 120503.26323147172 89916.01665860681 103473.49904093765 82887.12098159947 0.9308180182070818 1.1310197284125707 1.1703191577216185 1.4132038277008143 1.7175898191484575 1.5618462202051377 1.453823728033971 1.0848008181942732 1.2483664267203618 1.0 16.338860332423383 -4.858549266645 1.9488642887894534 1.3823283131066266 0.9856402138290429 0.2877567706846007 0.20529878874602886 0.4566355678863823 3.3346137070506883 0.06362360637330837 0.21313763707961708 1.385003061375523e-05 4.858549266645 -0.39668809927758375 S(ph)RSS(ph)S(ph)VGSSSSYPISPAVSR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSSSVGSSSSYPISPAVSR 20 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 3 S(0.971)RS(0.083)S(0.903)S(0.819)VGS(0.168)S(0.03)S(0.022)S(0.004)YPISPAVSR;S(0.989)RS(0.444)S(0.567)S(0.986)VGS(0.01)S(0.002)S(0.002)SYPISPAVSR 190.67 1.0344e-12 1227750000.0 784020.0 699930.0 587890.0 626800.0 642320.0 692420.0 627320.0 632400.0 739810.0 615740.0 True False 740528.8476948787 666304.3121836513 625786.3300572585 686370.8835457085 692866.9296991274 688098.3499398419 690735.6276532062 630206.3520032703 605479.1530924313 610285.0226384716 1.2134147492155687 1.0917920110557344 1.0254001111673516 1.124672666188483 1.1353169486343053 1.1275032557164137 1.1318246426348775 1.0326426646989828 0.992125204834189 1.0 19.219123659260134 -7.402525370456213 3.5724518445064666 0.9991885701537738 1.1174404962817706 0.5885530251389559 0.0438459107688559 0.19067992916976556 4.360544842783763 0.029320599206057247 0.012376800582729545 3.957989425224815e-08 7.402525370456213 0.11825192612799673 S(ph)RSS(ph)SVGS(ph)SSSYPISPAVSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSSSVGSSSSYPISPAVSR 20 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 3 S(0.916)RS(0.084)S(0.753)S(0.258)VGS(0.779)S(0.166)S(0.036)S(0.008)YPIS(0.001)PAVSR 247.32 2.055e-26 2046300000.0 735340.0 656590.0 541560.0 523030.0 546840.0 586480.0 553160.0 579540.0 668590.0 488280.0 True False 694549.2243360529 625046.4308383167 576469.8241266366 572738.6139452964 589873.1969060132 582819.5607762904 609078.8111213541 577529.7110056524 547190.9097823334 483954.21907609154 1.435154807952712 1.2915404106437625 1.1911660264625132 1.183456185253848 1.2188615651127697 1.204286558114817 1.2585463399495427 1.193356082540626 1.1306666792304567 1.0 18.884511052854492 -1.000000000000246 0.02669685926142747 1.1210552129198647e-11 2.9032737536041577 0.7149141258612537 0.056389275944330665 1096.886728041261 2.2546997943226055 82.20085842986396 180.7912723676866 0.09999999999994336 1.000000000000246 2.903273753592947 S(ph)RSSDIVSSVR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSSDIVSSVR 11 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.804)RS(0.138)S(0.058)DIVSSVR 85.287 0.017734 722840000.0 1536100.0 1319900.0 1306700.0 1179100.0 1241600.0 1296500.0 1291300.0 1337800.0 1554100.0 1329700.0 True False 1450889.4708605658 1256490.0227897102 1390931.9727939214 1291161.3094906595 1339306.856262356 1288408.0625877446 1421837.2058735327 1333159.4840448687 1271914.6156728708 1317919.8924909455 1.1008935210153783 0.9533887681252543 1.0553994827143696 0.9796963509294099 1.0162278177097608 0.9776072657592094 1.0788494915166484 1.0115633671217448 0.9650925089755478 1.0 20.32983125058185 -4.238067978118798 24.373581233130494 1.0072755934707445 1.1008936690993314 0.37445701541269505 0.037301770982977274 5023.270193802914 5238564.930132622 0.00885299410577903 0.4655945355645438 5.780055677702935e-05 4.238067978118798 0.09361807562858693 S(ph)RSSPATADKR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSSPATADKR 11 2 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.25)RS(0.25)S(0.25)PAT(0.25)ADKR;S(0.333)RS(0.333)S(0.333)PATADKR 80.52199999999999 0.0061264 862370000.0 215340.0 211100.0 169575.0 180027.0 200309.0 198139.0 164418.0 165777.0 228430.0 191778.0 True False 203394.66093035255 200958.43913244014 180506.07582959332 197136.71195290878 216072.1786976931 196902.3410050697 181038.97600504506 165201.9582796427 186952.87025169187 190078.9961210261 1.0700533203618572 1.0572364292395933 0.9496371483078668 1.037130435113351 1.1367493679318295 1.0358974164599388 0.9524407204348599 0.8691226366455355 0.9835535438784421 1.0 17.536239596290812 -6.765284360782939 4.775703305523729 0.9389033385706891 1.0480166825020216 0.43219656764646075 0.05376285300471791 0.17578153143790368 10.396754359484662 0.023226430039487742 0.016424376795736478 1.716783929212528e-07 6.765284360782939 0.10911334393133254 S(ph)RST(ph)PVRDR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSTPVRDR 9 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 2 S(0.97)RS(0.054)T(0.977)PVRDR 77.74 0.051484 921880000.0 1254100.0 1054900.0 993580.0 930210.0 890390.0 1018500.0 856930.0 880800.0 1338900.0 1015000.0 True False 1184532.5730136316 1004221.0205628196 1057627.756584209 1018616.8787221662 960458.6273739018 1012143.1637066082 943556.8472308578 877744.710380266 1095789.510922338 1006007.8896580505 1.177458532075989 0.9982238021057287 1.0513115925399992 1.012533688049307 0.9547227583874802 1.0060986341276539 0.9379219158525484 0.8725028097728119 1.08924544448136 1.0 19.94021018890689 -1.0000000022364703 0.7248440895575105 0.9733287962980016 29.39485274072045 0.4829621916802799 0.05727451940992668 276.34242788675357 1.322851418604245 0.021371540374966243 12779.235648676424 0.09999999948503367 1.0000000022364703 28.421523944422447 S(ph)RST(ph)T(ph)PAPK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSTTPAPK 9 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)RS(0.025)T(0.989)T(0.986)PAPK 116.24 0.0010262000000000001 347020000.0 718380.0 528680.0 614170.0 612370.0 563160.0 647060.0 710460.0 472360.0 766870.0 523010.0 True False 678530.0293449742 503281.41923514195 653760.3809067453 670569.4606842455 607477.4880579149 643021.4585252807 782280.230221413 470721.4934096527 627625.739219519 518376.53829562257 1.308952043963877 0.9708800110627844 1.2611689237638979 1.2935953137250773 1.1718846112427244 1.2404524723273163 1.5090965204433886 0.9080686694605131 1.2107525955613236 1.0 18.983640897808797 -7.290886489490101 24.998552972474073 1.0445580147541094 1.238695122665174 0.3101374771035712 0.14352672461920646 983.7803965737552 835155.9208017889 0.07746569927723027 0.037222539914507365 5.1181559007650544e-08 7.290886489490101 0.19413710791106453 S(ph)RST(ph)TPAPK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSTTPAPK 9 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RS(0.187)T(0.626)T(0.187)PAPK;S(1)RS(0.372)T(0.448)T(0.179)PAPK 103.13 0.0033610999999999997 1585040000.0 4577800.0 3597900.0 3057300.0 3426000.0 3505100.0 3841100.0 3236600.0 3268000.0 4338900.0 3113800.0 True False 4323860.308381946 3425051.4834419987 3254378.4498529597 3751606.0099355374 3780931.4287090646 3817126.270116301 3563787.114171984 3256664.070756933 3551065.1347680488 3086214.1544997455 1.401024067651849 1.1097906081625033 1.0544888614122996 1.215601323215254 1.2251033918681278 1.2368313017263803 1.1547439470381309 1.05522945191884 1.1506217511155354 1.0 21.557406744296678 -13.999999999241593 0.08271043732102001 0.3999163161012457 1.3438194472823417 0.3455417264542159 0.08923465572275853 316.912608956824 1.8433195470407586 33.90308040422616 2.9220117178503955 1.0000000017462959e-14 13.999999999241593 0.943903131181096 S(ph)RSTTELDDYSTNK ddPTM_KYSE-520_SHP099_60min_R1 5 SRSTTELDDYSTNK 14 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.773)RS(0.224)T(0.003)T(0.001)ELDDYSTNK;S(0.558)RS(0.221)T(0.221)T(0.001)ELDDYSTNK;S(0.789)RS(0.206)T(0.005)TELDDYSTNK;S(0.464)RS(0.055)T(0.464)T(0.017)ELDDYSTNK;S(0.282)RS(0.282)T(0.218)T(0.218)ELDDYSTNK 301.04 1.2582999999999998e-46 4119760000.0 6662390.0 5454070.0 4987070.0 4927310.0 5237550.0 5258500.0 5058100.0 5164970.0 6964610.0 5140420.0 True False 6292813.9455548115 5192048.290474026 5308544.511794127 5395600.0609502345 5649715.387416961 5225679.75095846 5569422.110298856 5147053.924583058 5700012.387530686 5094879.877986245 1.2351250856265625 1.0190717769240494 1.0419371288283117 1.0590239986350471 1.1089006066321656 1.0256728080160182 1.093141005024082 1.0102404861049314 1.1187726745352866 1.0 22.280616701686515 -4.25433657435184 24.967687418676892 1.0552874208412795 1.23512517052435 0.653545931074888 0.039754701901409714 483.424244793614 1699285.1692793828 0.009134652815356884 0.088696002208646 5.567541022264683e-05 4.25433657435184 0.17983774968307054 S(ph)RSVS(ph)PCSNVESR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSVSPCSNVESR 13 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.635)RS(0.635)VS(0.729)PCS(0.001)NVESR 63.46 0.027670999999999998 213750000.0 683010.0 629160.0 593110.0 542470.0 605640.0 676820.0 595570.0 619710.0 770040.0 668500.0 True False 645122.0737533201 598934.2092115866 631342.819609554 594026.1857004475 653300.4223797774 672595.7153263693 655776.0278030672 617560.3706514015 630220.1471287169 662577.6100851302 0.9736551068642852 0.9039457417443272 0.9528586689315339 0.896538272134075 0.9859983380601092 1.0151198970335746 0.989734663262785 0.932057409202305 0.9511642674550143 1.0 19.337729926927704 -5.784025495559381 24.999909299947973 0.9779567963280553 0.9312712595371674 0.37012661994840457 0.030183525003008575 270.974969950226 299932.55643697793 0.009732152498351434 0.011042964417293777 1.6442751920636267e-06 5.784025495559381 -0.04668553679088794 S(ph)RSWT(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSWTSPK 8 1 O75494;O75494-2 O75494 SRSF10 Serine/arginine-rich splicing factor 10 2 S(0.552)RS(0.552)WT(0.763)S(0.133)PK 59.426 0.063716 575450000.0 1482300.0 1323000.0 1260300.0 1285700.0 1275600.0 1383800.0 1348900.0 1252700.0 1600600.0 1245000.0 True False 1400073.8641082072 1259441.094136513 1341540.9545512982 1407892.5414401982 1375982.4628288168 1375163.1909054536 1485259.9759953616 1248354.6760823778 1309971.3878424813 1233970.2685953446 1.1346090742542296 1.0206413608086056 1.0871744552471299 1.1409452701342904 1.1150855882412205 1.114421656585642 1.2036432431115747 1.0116570130197766 1.0615907215768257 1.0 20.234876203789796 -7.309782856497704 24.99973080928655 1.0274678390841487 1.1126089483900967 0.4593545294572192 0.045669918119387566 413.90801409495134 214041.05139158355 0.025824486230760575 0.012405728229596983 4.900237657922825e-08 7.309782856497704 0.08514110930594798 S(ph)RSY(ph)S(ph)RDYR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSYSRDYR 9 2 P62995 P62995 TRA2B Transformer-2 protein homolog beta 3 S(0.959)RS(0.396)Y(0.676)S(0.967)RDY(0.001)R 52.071000000000005 0.045864 991600000.0 870830.0 859150.0 838850.0 992070.0 763900.0 784210.0 802910.0 903680.0 1163500.0 799060.0 True False 822523.323943434 817875.1443895584 892923.6132074562 1086356.0345232778 824014.5840035537 779315.4545020707 884075.9784464639 900545.3450004974 952237.7294481595 791980.9500592733 1.038564530980038 1.0326954762337996 1.1274559232019763 1.3716946530620124 1.0404474803868489 0.9840078280212994 1.1162843984824358 1.1370795534073124 1.2023492855186635 1.0 19.595106203244793 -10.218347303104032 5.049799977083358 0.9999868508745653 1.1165118441368234 0.10073478736653485 0.10462946834092679 1.6422965563178186e-05 2.541939545618267e-06 0.10734438132272785 0.026031897352634135 6.048569802230812e-11 10.218347303104032 0.11652499326225807 S(ph)RT(ph)PDRER ddPTM_KYSE-520_SHP099_60min_R1 1 SRTPDRER 8 2 Q9BUQ8;F8W1J5;F8VVA2;Q9BUQ8-2 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 2 S(1)RT(1)PDRER 71.153 0.035213999999999995 180910000.0 361820.0 319470.0 283610.0 373410.0 327010.0 365170.0 300000.0 319100.0 421890.0 355400.0 True False 341749.12332971155 304122.18166575365 301891.9543920444 408898.77413019014 352743.82656761614 362890.8385770665 330326.92771785 317993.11657849996 345285.4109814219 352251.4324970161 0.9701851910356858 0.8633667704625442 0.8570354199896737 1.1608150781151299 1.0013978483128076 1.0302040108244004 0.9377589336578446 0.9027447080181673 0.9802242918752269 1.0 18.426246047975667 S(ph)RT(ph)PLISR ddPTM_KYSE-520_SHP099_60min_R1 2 SRTPLISR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.999)RT(1)PLIS(0.001)R;S(0.964)RT(0.692)PLIS(0.344)R 84.289 0.025672000000000004 2923200000.0 4223600.0 3998100.0 3397500.0 3579900.0 3751400.0 3664200.0 3403700.0 3540200.0 4435700.0 3583700.0 True False 3989308.4884621375 3806025.274729548 3616508.286192199 3920132.6196638215 4046613.8374537644 3641330.368634022 3747779.212910828 3527919.87248889 3630288.694897471 3551951.206076409 1.1231315569981735 1.0715308442915792 1.018175103308106 1.1036561011754766 1.1392650412908611 1.0251633981921568 1.0551325160377798 0.9932343289101471 1.0220547761712064 1.0 21.760180332533842 -6.736083280584737 1.7803695052784307 1.0090450634352448 1.0851555884925714 0.49033212352145084 0.03537618809593874 0.3384835913183139 2.195836767725373 0.01942344235960313 0.01232813563658668 1.836186201357753e-07 6.736083280584737 0.07611052505732663 S(ph)RT(ph)PLLPR ddPTM_KYSE-520_SHP099_60min_R1 9 SRTPLLPR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RT(1)PLLPR;S(1)RT(1)PLLPR;S(1)RT(1)PLLPR;S(1)RT(1)PLLPR;S(1)RT(1)PLLPR;S(1)RT(1)PLLPR;S(1)RT(1)PLLPR;S(1)RT(1)PLLPR;S(1)RT(1)PLLPR 80.69 0.015058000000000002 33856920000.0 13478477.0 12385453.0 11042813.0 10904831.0 11802782.0 11785926.0 11337284.0 11670263.0 14656587.0 11464961.0 True False 12730799.01213223 11790437.246936038 11754650.395105502 11941222.859583013 12731593.794756701 11712365.664066741 12483367.307949126 11629781.581512857 11995320.263291309 11363390.365144689 1.1203345659216144 1.0375809391448212 1.0344316280078645 1.050850360312423 1.1204045083066714 1.0307104911217762 1.0985601045828524 1.0234429345299338 1.0556110348972045 1.0 23.43789000374016 -8.183751834091474 0.896652334115823 1.000719528700364 1.0668902790983161 0.26199540411749134 0.034094078801326796 1.1606240820832472 1.953762811334703 0.031993931322762015 0.01097237139904604 6.550103552110443e-09 8.183751834091474 0.06617075039795206 S(ph)RT(ph)PPAIR ddPTM_KYSE-520_SHP099_60min_R1 2 SRTPPAIR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RT(1)PPAIR;S(1)RT(1)PPAIR 58.273999999999994 0.035663 4834600000.0 584560.0 412570.0 351840.0 398110.0 389640.0 425980.0 368480.0 347191.0 508410.0 381990.0 True False 552133.2915085297 392749.517919805 374520.1693639042 435946.2547038636 420302.45125166274 423321.3008107421 405729.55441824516 345986.67545598844 416095.5599731325 378605.8657837234 1.4583326393150309 1.037357192305523 0.9892085760178023 1.1514514013179489 1.1101319055942949 1.1181054998565767 1.0716409625043053 0.9138439383124388 1.0990203733685016 1.0 18.530337237489874 -4.259720622582557 24.864015799714704 1.057083176250158 1.4583327843330127 0.7605443449953276 0.06796025296886003 70.49582309460465 1019719.883725765 0.017606713769701778 0.10937119669615533 5.498945018889817e-05 4.259720622582557 0.4012496080828547 S(ph)RT(ph)PPTSR ddPTM_KYSE-520_SHP099_60min_R1 2 SRTPPTSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RT(1)PPTSR;S(1)RT(1)PPTSR 99.539 0.007903 5660300000.0 5823100.0 5187600.0 4707400.0 4941800.0 5205500.0 5099600.0 5169500.0 5214600.0 5934600.0 4971800.0 True False 5500081.034937947 4938379.909253655 5010846.536106302 5411467.186193659 5615143.234756509 5067771.504799427 5692083.509458097 5196511.769696785 4857026.239091576 4927753.720001873 1.116143652352792 1.002156396170663 1.016862209604176 1.0981610473405725 1.1394934799530474 1.0284141198512458 1.1551071406742164 1.0545396675576575 0.9856471153127617 1.0 22.23249872393438 -7.665708118326502 4.743592539438659 0.9932771124827053 1.0769358527297286 0.32704767096448795 0.048763021916679014 0.254857101825243 9.42946355050012 0.0376300127105621 0.012898696288397231 2.1591950786029492e-08 7.665708118326502 0.08365874024702324 S(ph)RT(ph)PPVTR ddPTM_KYSE-520_SHP099_60min_R1 2 SRTPPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)RT(0.996)PPVT(0.004)R;S(1)RT(0.994)PPVT(0.007)R 65.695 0.0472 35841000000.0 9119200.0 8118300.0 7335000.0 6811000.0 7763800.0 7563200.0 7792100.0 7373100.0 8507300.0 7762200.0 True False 8613339.797325486 7728284.682183258 7807825.836414946 7458315.392198172 8374766.890020668 7515995.263373413 8579801.51156755 7347524.436994468 6962588.771580865 7693432.94690021 1.1195703994269448 1.0045300629151632 1.014868900568091 0.9694391884189009 1.0885604577076318 0.9769364749453897 1.115211059976089 0.9550384708239884 0.9050041534951165 1.0 22.875196067422028 -7.48068245746574 21.412259512285903 0.9450085431557895 1.035426349722429 0.34600123095835134 0.05481425568492216 91.14981903327394 46253.81184222641 0.02832618106793859 0.01360195793913098 3.3061118523713674e-08 7.48068245746574 0.09041780656663945 S(ph)RT(ph)RS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTRSPVR 8 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(1)RT(1)RS(1)PVR 77.124 0.030652 350250000.0 375880.0 290040.0 306120.0 371230.0 297710.0 369910.0 368420.0 261190.0 408350.0 298050.0 True False 355029.18710179656 276106.04304108437 325852.9850093181 406511.58758563094 321138.08326181176 367601.2544788529 405663.4890327012 260283.99285220416 334203.93366579857 295409.50887939084 1.2018204439273725 0.9346552319472301 1.1030551665226074 1.3760951335916565 1.0870946046388958 1.244378543782544 1.3732242085623743 0.8810955132743284 1.1313242249160187 1.0 18.172356739917813 -7.2757180319129775 24.9994213630646 1.0046574198256333 1.1810095725500036 0.27603464646789455 0.13651911456837237 1215.885393931126 2128790.8817706374 0.07641487705863798 0.0369763298361577 5.300074424625047e-08 7.2757180319129775 0.17635215272437033 S(ph)RT(ph)SPAPWK ddPTM_KYSE-520_SHP099_60min_R1 5 SRTSPAPWK 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.997)RT(0.502)S(0.502)PAPWK;S(0.671)RT(0.804)S(0.526)PAPWK;S(0.906)RT(0.745)S(0.348)PAPWK;S(0.655)RT(0.782)S(0.563)PAPWK;S(0.925)RT(0.69)S(0.385)PAPWK 78.763 0.010669 40085800000.0 9717860.0 8175320.0 7902450.0 8684400.0 8526850.0 8597640.0 8764470.0 9265510.0 9800840.0 8649840.0 True False 9178790.933726367 7782565.355794494 8411854.571367057 9509762.764939927 9197864.583860062 8543978.939627366 9650468.160584236 9233370.108396294 8021254.515070657 8573209.147073679 1.070636534845227 0.9077773821079522 0.9811792092157582 1.1092418955142282 1.0728613318618967 0.996590517396127 1.125654115632798 1.0770027827383577 0.9356186671135368 1.0 23.031403908310374 -5.149912928992729 9.901343105739008 1.050928729947826 0.9781847343288316 0.13834588649871649 0.06518797331854456 0.6468674217021977 53.494913126843066 0.017304608134780797 0.03002321136096095 7.080877335332289e-06 5.149912928992729 -0.07274399561899447 S(ph)RT(ph)SPVTR ddPTM_KYSE-520_SHP099_60min_R1 3 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.991)RT(0.501)S(0.502)PVT(0.006)R;S(0.987)RT(0.621)S(0.392)PVTR;S(0.828)RT(0.72)S(0.452)PVT(0.001)R 125.72 0.0017745 21652430000.0 4189420.0 3877760.0 3651780.0 3702010.0 3780020.0 3785050.0 3721140.0 4026520.0 4654990.0 3890500.0 True False 3957024.5211982843 3691466.5889635757 3887179.581854584 4053847.9173501083 4077486.0686282474 3761426.0989569896 4097309.1460266765 4012552.94191683 3809761.1587485094 3856033.1967632025 1.0261904706940426 0.9573223052286568 1.0080773124872282 1.051300056429222 1.0574302296077054 0.9754651754851003 1.0625710249242677 1.0405908707645495 0.9880000934500422 1.0 21.878686041172 -5.000988498093393 24.993359753848445 1.0277502713748488 0.9894922390036198 0.14517956552325528 0.03205995707135566 57.887929245346044 1463793.7459156108 0.008158364042975094 0.016645961660413013 9.977264873793662e-06 5.000988498093393 -0.038258032371228934 S(ph)RTATECDVR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTATECDVR 10 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1;C9JLY8 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 S(0.96)RT(0.037)AT(0.003)ECDVR 50.791000000000004 0.048513 129920000.0 283540.0 264910.0 255500.0 227450.0 253150.0 269420.0 260750.0 273030.0 313230.0 251490.0 True False 267811.47097702336 252183.32596198365 271969.9388144544 249066.77961466412 273071.46477353014 267738.44984372525 287109.15467476496 272082.92265568115 256355.32788573034 249261.99425625944 1.0744175893164591 1.011719924308721 1.0911007096206153 0.9992168294962985 1.0955198588870827 1.074124639990125 1.1518368675956105 1.0915539830591268 1.0284573412430393 1.0 17.927303401879502 -5.809237836638471 24.99997835708307 1.0820996938236807 1.0451556236040587 0.07258982501080535 0.04583641618933595 242.10133625775964 126624.44118294997 0.013821487554232908 0.015672137126300622 1.5515370948803239e-06 5.809237836638471 -0.03694407021962198 S(ph)RTGS(ph)ESSQTGTSTTSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.626)RT(0.374)GS(0.991)ES(0.009)SQTGTSTTSSR 111.35 0.0001296 364460000.0 215540.0 187300.0 161390.0 154380.0 182310.0 160920.0 171600.0 170110.0 213610.0 173160.0 True False 203583.56653166242 178301.82685696852 171793.45763313014 169052.2287839607 196656.7597979945 159915.63858975697 188947.00265461017 169519.9281139724 174823.80866989394 171625.93711644155 1.1862051269881129 1.03889790699874 1.0009760792541218 0.9850039663251208 1.1458452207289072 0.9317684801992394 1.1009233559285212 0.9877290749996587 1.0186327987900965 1.0 17.38890807227198 -4.266011311112034 4.208495223912738 1.0234711561333103 1.1984630141489732 0.42045061980044107 0.05764700302407021 0.19566832924294905 7.917295623053544 0.013502576772935865 0.10271302256917356 5.41986774281769e-05 4.266011311112034 0.17499185801566286 S(ph)RTGSESSQTGTSTTSSR ddPTM_KYSE-520_SHP099_60min_R1 4 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.428)RT(0.428)GS(0.128)ES(0.016)SQTGTSTTSSR;S(0.46)RT(0.46)GS(0.08)ESSQTGTSTTSSR;S(0.493)RT(0.493)GS(0.014)ESSQTGTSTTSSR;S(0.489)RT(0.489)GS(0.022)ESSQTGTSTTSSR 130.37 1.5997e-05 456792000.0 180318.30000000002 202560.0 204613.3 222232.1 157526.4 167987.8 140631.8 127567.3 272204.1 128415.0 True False 170315.6844433805 192828.71355124156 217803.00071085535 243352.9719674829 169922.831477389 166939.32582828944 154848.23477810412 127124.79881073169 222778.6971469529 127277.34300535817 1.3381461336461942 1.5150278046197412 1.711247230402085 1.9119897243395327 1.33505954371027 1.311618563731815 1.216620579293404 0.9988014819368122 1.750340570336814 1.0 16.957616098365772 -5.974296005289113 22.652991288886945 1.2607912626648088 1.618910463483906 0.3466748749799631 0.23767319237567638 90.11685926694214 79418.67118980852 0.07343137186468528 0.08325782043319986 1.0609721760852873e-06 5.974296005289113 0.3581192008190972 S(ph)RTLTAVHDAILEDLVFPSEIVGK ddPTM_KYSE-520_SHP099_60min_R1 2 SRTLTAVHDAILEDLVFPSEIVGK 24 1 P62081;B5MCP9;A0A2R8Y623 P62081 RPS7 40S ribosomal protein S7 1 S(0.333)RT(0.333)LT(0.333)AVHDAILEDLVFPSEIVGK;S(0.333)RT(0.333)LT(0.333)AVHDAILEDLVFPS(0.001)EIVGK 94.837 0.0020212 68508000.0 82761.0 100949.0 88710.0 96001.0 91423.0 76738.0 66622.0 83689.0 118018.0 74413.0 True False 78170.08235003668 96099.25851246178 94428.38854101846 105124.90617624689 98617.46997428586 76259.04967748429 73356.8019280621 83398.70239215954 96588.90619167422 73753.75871243805 1.0598793026239874 1.3029743865278465 1.2803196771189613 1.4253498128295163 1.3371178865444688 1.0339683157683426 0.9946178094336362 1.130772232467861 1.3096133387353068 1.0 16.170428954845043 -6.258755838993239 24.993267746361465 1.0957690684589483 1.2903092855804823 0.3774770777916967 0.11998432964009363 269.544864579593 2510424.7286417317 0.04234360694880393 0.04050352254231109 5.51117448378834e-07 6.258755838993239 0.19454021712153402 S(ph)RTPLDKDLINTGICESSGK ddPTM_KYSE-520_SHP099_60min_R1 1 SRTPLDKDLINTGICESSGK 20 2 O95714 O95714 HERC2 E3 ubiquitin-protein ligase HERC2 1 S(0.5)RT(0.5)PLDKDLINTGICESSGK 183.07 3.313599999999999e-11 470820000.0 522000.0 472900.0 438950.0 339040.0 361930.0 400230.0 376320.0 419250.0 531340.0 410180.0 True False 493043.6194187979 450181.1741626281 467245.419344832 371262.25966390694 390411.8318999956 397732.0161122195 414362.0981292716 417795.71960368566 434862.0499913926 406546.1243152109 1.2127618243791747 1.1073311175230518 1.1493048178281453 0.9132106726863124 0.9603137468291156 0.9783195370074232 1.0192253064205838 1.0276711413924402 1.069649970772387 1.0 18.633059515656846 -5.239729891975004 24.23916745008545 0.995445873428661 1.1515524902128953 0.7200716636026294 0.045965519985528606 314.5075059796962 351154.3515071595 0.01325536152520385 0.02292835040396522 5.757979416323105e-06 5.239729891975004 0.15610661678423432 S(ph)RTPLIS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SRTPLISR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.671)RT(0.512)PLIS(0.817)R 73.891 0.060226 3226000000.0 4334300.0 4058700.0 3361700.0 3429300.0 3661700.0 3952300.0 3863200.0 3528000.0 4207300.0 4047500.0 True False 4093867.738787163 3863713.9597670995 3578400.560910178 3755219.64094336 3949854.9577769567 3927632.22966875 4253729.957198669 3515762.191441392 3443360.3774020136 4011642.298907346 1.0204967027848453 0.9631252419537659 0.892003896230935 0.9360803783443434 0.9845979934085304 0.9790584346811085 1.0603462722379962 0.8763897500031304 0.8583418263238186 1.0 21.935761542024277 -7.314220298153714 24.999805319346653 0.900524308763964 0.971615339051009 0.21486496097548513 0.05515123311655357 499.04285659312916 236370.32848024982 0.03075357302772 0.014773549374648877 4.850423974489172e-08 7.314220298153714 0.071091030287045 S(ph)RTPLISR ddPTM_KYSE-520_SHP099_60min_R1 2 SRTPLISR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.889)RT(0.111)PLISR;S(0.987)RT(0.013)PLISR 96.604 0.0024684999999999998 210200000.0 157891.0 144855.0 145782.0 113463.0 125497.0 120557.0 111215.0 121299.0 162280.0 126421.0 True False 149132.47148209476 137895.9483682123 155179.340979447 124246.489406105 135372.89991974598 119804.55904465159 122457.69755380241 120878.2420803994 132814.04274589382 125301.0082940496 1.1901937064394468 1.100517467861117 1.2384524521564946 0.9915841149061633 1.0803815688542602 0.9561340381515586 0.9773081575403235 0.9647028681263993 1.0599598882254246 1.0 16.93503849847386 -5.2742472191543746 24.920205599394126 1.0028640981180121 1.1688008341348797 0.7237343423415862 0.04865083702470824 365.79017315111605 711716.885546568 0.013450228220227716 0.0200982936293209 5.318054464859264e-06 5.2742472191543746 0.16593673601686754 S(ph)RTPLLPR ddPTM_KYSE-520_SHP099_60min_R1 8 SRTPLLPR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.643)RT(0.357)PLLPR;S(0.761)RT(0.239)PLLPR;S(0.5)RT(0.5)PLLPR;S(0.918)RT(0.082)PLLPR;S(0.629)RT(0.371)PLLPR;S(0.922)RT(0.078)PLLPR;S(0.924)RT(0.076)PLLPR;S(0.924)RT(0.076)PLLPR 132.25 0.00050969 5354280000.0 2308095.0 2129521.0 1676264.0 1634263.0 2138630.0 2260165.0 1816857.0 1942464.0 2407636.0 1854877.0 True False 2180060.369276686 2027215.6146838125 1784318.6595572287 1789582.864160912 2306928.0138598233 2246058.4718693597 2000522.6363755704 1935726.045758507 1970469.9939644611 1838444.2328524692 1.1858180576378847 1.1026799608375675 0.9705590344661904 0.9734224363086905 1.2548262126398417 1.2217169450848393 1.0881606309437115 1.0529152917274507 1.071813851490695 1.0 20.81005398399025 -7.831950497473998 1.3962565809785596 1.0075258583604128 1.110126636534142 0.12975506631749012 0.08922286341385469 0.9796276536950649 4.053419666159605 0.09404024057317092 0.028919425668651775 1.472480331739515e-08 7.831950497473998 0.10260077817372926 S(ph)RTPPS(ph)APSQSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.993)RT(0.352)PPS(0.643)APS(0.003)QS(0.009)R 90.376 0.0089411 293590000.0 216120.0 186030.0 181100.0 181610.0 191440.0 206590.0 189390.0 203400.0 250990.0 197540.0 True False 204131.39277546087 177092.83956327732 192773.99577024524 198870.1597969623 206505.23885540018 205300.59517933047 208535.38946827868 202694.45287391669 205416.54294301165 195789.94928379435 1.0426040433749524 0.9045042414643263 0.984595973774029 1.0157322197816356 1.0547284965893433 1.048575761576763 1.0650975202307755 1.035264852028305 1.0491679664580928 1.0 17.578947181714494 -5.381605515186146 2.6912878870374235 1.0449926336710824 0.9687756725872178 0.39779516356695277 0.03527435929719265 0.23589691931577753 3.3082742934000353 0.009999599656846419 0.016272352533140844 4.153311310885458e-06 5.381605515186146 -0.07621696108386466 S(ph)RTPPSAPSQSR ddPTM_KYSE-520_SHP099_60min_R1 2 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.497)RT(0.497)PPSAPS(0.003)QS(0.002)R;S(0.5)RT(0.5)PPS(0.001)APSQSR 59.57 0.034437 6798500000.0 2509550.0 2271650.0 2106900.0 1764420.0 1671840.0 2424230.0 1902260.0 2119810.0 2734600.0 2170690.0 True False 2370340.2588361055 2162516.5241838326 2242714.145159191 1932109.9463077825 1803404.2965316148 2409099.48134754 2094559.0050685275 2112456.873877372 2238065.5736561585 2151459.3753712657 1.1017360057877312 1.0051393714141865 1.042415288353831 0.8980462138516414 0.8382237271946681 1.119751322718708 0.9735526633902073 0.981871606807745 1.0402546286842844 1.0 21.036884168381604 -4.1578744581777665 1.5350160728017825 0.9812259744710652 1.1667585692467826 0.18212668388137043 0.07332075761973225 2.5728114431626543 4.705149373062278 0.021389834433240093 0.7745620632619676 6.95225257816123e-05 4.1578744581777665 0.18553259477571737 S(ph)RTPPTSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTPPTSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.609)RT(0.39)PPT(0.001)SR 48.284 0.051547 629310000.0 71568.0 72510.0 65600.0 72008.0 92698.0 86338.0 74689.0 72834.0 117510.0 57931.0 True False 67597.98037272907 69026.51076027109 69828.68096371113 78851.6186700053 99992.8052205282 85799.13251654503 82239.29301439514 72581.35585358345 96173.14618603648 57417.776409635975 1.1773005609005895 1.2021801448355447 1.2161509088323443 1.3732962786202958 1.7414956042036347 1.4942956324958978 1.432296723364466 1.2640920702983316 1.6749716237687062 1.0 15.809209840625597 -5.338359844191852 3.95243211747611 1.4576591408061033 1.1969537560632146 0.21917575383332621 0.1947835352598026 0.309041881857255 9.207353144325392 0.054082326517830584 0.08440027373195849 4.588176918631615e-06 5.338359844191852 -0.2607053847428886 S(ph)RTPPVTR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTPPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.601)RT(0.399)PPVTR 54.471000000000004 0.036736000000000005 2046300000.0 84631.0 80529.0 70931.0 77771.0 85772.0 91314.0 79758.0 104370.0 131000.0 70130.0 True False 79936.34972228408 76660.26596350678 75503.32575361272 85162.33245729626 92521.76842407759 90744.07545479156 87820.71700306768 104007.96483014109 107213.7022412627 69508.70276031437 1.1500193004310149 1.102887306469422 1.0862427689662042 1.2252038820370454 1.3310817890404136 1.3055066754403797 1.2634492303200984 1.4963301097531618 1.54245005277923 1.0 16.08490599973265 -5.571023098978313 2.268040469095553 1.347229003924214 1.1110090289555228 0.3062728739340602 0.1387752701704062 0.3409489586049557 3.5440829211063547 0.044091490671230964 0.06452569642932629 2.6852016230665677e-06 5.571023098978313 -0.2362199749686913 S(ph)RTPS(ph)ASNDDQQE ddPTM_KYSE-520_SHP099_60min_R1 1 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 S(0.679)RT(0.321)PS(0.766)AS(0.234)NDDQQE 125.33 0.0019279 492520000.0 308110.0 292080.0 313490.0 287880.0 289490.0 355050.0 378370.0 426410.0 538080.0 453870.0 True False 291018.52409794275 278048.0383789816 333698.067001735 315240.0286457222 312271.21602721437 352834.0012508897 416619.3321353439 424930.8832348419 440378.2358929657 449849.0649055171 0.6469248172363459 0.6180918447332567 0.741800068144684 0.7007684426596126 0.6941688677129993 0.7843386343928408 0.9261313730258559 0.9446076837440824 0.9789466517740999 1.0 18.779081498459263 -6.6641138882870985 1.218744539483015 0.986979241731387 0.6707148800750026 0.9466115786548225 0.03184234438833742 0.10401325171064858 0.3133929813677031 0.0211759952870047 0.01326004598329791 2.1671357261032562e-07 6.6641138882870985 -0.3162643616563844 S(ph)RTPSAS(ph)NDDQQE ddPTM_KYSE-520_SHP099_60min_R1 1 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 S(0.998)RT(0.002)PS(0.156)AS(0.844)NDDQQE 209.23 1.3121e-10 410100000.0 337940.0 305800.0 268100.0 300350.0 326950.0 393270.0 379650.0 452380.0 547900.0 472250.0 True False 319193.7945333114 291108.90898484184 285382.1549751669 328895.17369648005 352679.10490896984 390815.4560539007 418028.72702693933 450810.7993662856 448415.1714350214 468066.23240494076 0.6819415126215844 0.6219395650250479 0.6097046426717504 0.7026680220160405 0.7534811966607635 0.8349575957357085 0.8930973825629186 0.9631346338529996 0.9580164950824341 1.0 18.83635316322272 -6.3740707187686345 0.822817233636047 0.9873975383931892 0.6281627671836592 0.9717838511841214 0.02345236283228666 0.0946895742142941 0.13671686573210465 0.01682230142124063 0.0142268654339942 4.2259979420988987e-07 6.3740707187686345 -0.35923477120953007 S(ph)RTPSASNDDQQE ddPTM_KYSE-520_SHP099_60min_R1 1 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 S(0.888)RT(0.108)PS(0.004)ASNDDQQE 126.03 0.00089151 261370000.0 273420.0 283630.0 220510.0 184670.0 186340.0 255720.0 198900.0 225590.0 259500.0 239190.0 True False 258252.847550743 270003.9890626907 234724.4274284749 202220.98127694 201003.89787043078 254123.95662548218 219006.75307693487 224807.4809431016 212381.34146265383 237070.9626870041 1.0893482888990693 1.1389163227854557 0.9901019710219542 0.8529976804621356 0.8478638446152036 1.0719320229909073 0.9238025213829383 0.9482708400687033 0.895855566010642 1.0 17.854959441546498 -4.898971582146609 4.429831961492989 0.933062118593577 1.112580899631592 0.5516023644785626 0.06381928701686647 0.15255004830540056 5.22928575128469 0.017368906703908078 0.038565588862252316 1.2619101043782058e-05 4.898971582146609 0.179518781038015 S(ph)RTPVQDHR ddPTM_KYSE-520_SHP099_60min_R1 8 SRTPVQDHR 9 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.5)RT(0.5)PVQDHR;S(0.5)RT(0.5)PVQDHR;S(0.5)RT(0.5)PVQDHR;S(0.735)RT(0.265)PVQDHR;S(0.816)RT(0.184)PVQDHR;S(0.5)RT(0.5)PVQDHR;S(0.5)RT(0.5)PVQDHR;S(0.5)RT(0.5)PVQDHR 84.289 0.0049342 17027320000.0 3423106.0 3073107.0 3159813.0 3154067.0 3195797.0 2887988.0 2978286.0 3102972.0 3691653.0 2931317.0 True False 3233219.486387368 2925470.3268923513 3363499.6018595593 3453828.579375179 3447288.0423024027 2869962.995647248 3279360.214150287 3092208.514371112 3021341.8741989587 2905347.8119101203 1.1128510924348463 1.006926026171373 1.157692579205595 1.1887831691670885 1.1865319629445619 0.987820798557124 1.1287324019199865 1.064316121359026 1.0399243291331024 1.0 21.47027945463424 -6.257931640234014 24.997902282781027 1.0534643432386481 1.1284309014646001 0.33577821618956605 0.06001202433751578 459.56937101334694 3275122.208271705 0.02161712434574305 0.020830598719071232 5.521643454158604e-07 6.257931640234014 0.074966558225952 S(ph)RTS(ph)PAPWK ddPTM_KYSE-520_SHP099_60min_R1 5 SRTSPAPWK 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.885)RT(0.352)S(0.762)PAPWK;S(0.998)RT(0.034)S(0.968)PAPWK;S(0.763)RT(0.543)S(0.694)PAPWK;S(0.786)RT(0.374)S(0.84)PAPWK;S(1)RT(0.012)S(0.988)PAPWK 99.49799999999999 0.008251600000000001 41971300000.0 17112300.0 14725000.0 14004070.0 15434600.0 15075200.0 15102100.0 15208200.0 15993700.0 16811900.0 15066000.0 True False 16163046.606475692 14017588.89732441 14906794.759504227 16901499.743418284 16261532.473845256 15007842.19206046 16745593.273728693 15938221.587657657 13759282.753510538 14932526.961170644 1.0824053188388538 0.9387285175358888 0.9982767684442607 1.131857976038992 1.0890007107390767 1.0050437029905026 1.1214172468780805 1.0673492590438405 0.9214302970481207 1.0 23.831954990827008 -5.110320522340595 19.354792125077605 1.054666295937352 0.9996210274069753 0.06515595445841482 0.06746908298813305 9.749449160557274 1687.8023679575022 0.018121725597291246 0.031388050595855074 7.756744343519306e-06 5.110320522340595 -0.05504526853037672 S(ph)RTS(ph)PITR ddPTM_KYSE-520_SHP099_60min_R1 3 SRTSPITR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.827)RT(0.177)S(0.99)PIT(0.005)R;S(0.802)RT(0.207)S(0.982)PIT(0.009)R;S(0.895)RT(0.109)S(0.995)PIT(0.001)R 63.555 0.020144 8385800000.0 1342600.0 1048750.0 1213780.0 901340.0 1262710.0 1378570.0 1097240.0 895104.0 1279650.0 1433284.0 True False 1268123.3015932546 998366.4757941578 1292022.2009166647 987003.0826022471 1362078.093162885 1369965.8332754243 1208159.727230448 891999.0931428433 1047297.8173513876 1420586.2188380791 0.8926760549813537 0.702784852165283 0.9094993206209131 0.6947857648580691 0.9588140973780184 0.9643665517154897 0.8504656114562492 0.6279091556107197 0.737229323685816 1.0 20.438054964185216 -10.12053211872645 5.243976902117373 1.0000033378825293 0.8154181635125568 0.19415120003037845 0.1128308233025816 6.198709934269491e-06 1.0395177317890182e-06 0.11380163844662526 0.027600277087355126 7.57648698050399e-11 10.12053211872645 -0.18458517436997246 S(ph)RTS(ph)VQTEDDQLIAGQSAR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTSVQTEDDQLIAGQSAR 19 1 P35221;G3XAM7;P35221-2;P35221-3;P26232;P26232-5;P26232-2;P26232-3;P26232-4;P26232-6;A0A0A0MRI5;A0A0A0MTJ6 P35221 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 2 S(0.562)RT(0.561)S(0.876)VQT(0.002)EDDQLIAGQSAR 103.71 0.00014179 689210000.0 287180.0 353340.0 266660.0 257490.0 253400.0 266820.0 243960.0 298620.0 367080.0 308240.0 True False 271249.5529208629 336365.01602584706 283849.3302710857 281961.77218280826 273341.1383512245 265154.6774081467 268621.85762015596 297584.1569184319 300427.5253337611 305509.2334070912 0.8878604089828696 1.1009978725508454 0.9291022962073829 0.9229238967291509 0.8947066355503478 0.8679105192700607 0.879259374993152 0.974059453456521 0.9833664337517463 1.0 18.220856457719176 -1.2432324898262732 23.77781267654444 0.9413755756453829 0.004744586229047831 0.0 0.06821734867375526 0.0 0.0 0.016169871819724485 0.0 0.05711727902514522 1.2432324898262732 -0.936630989416335 S(ph)RTS(ph)VTR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTSVTR 7 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.998)RT(0.399)S(0.603)VTR 113.93 0.017059 2767000000.0 1451100.0 1033000.0 1146200.0 1265000.0 1194900.0 1295500.0 1718800.0 1011000.0 1398500.0 1328800.0 True False 1370604.590303865 983373.1294353888 1220085.8859848431 1385225.2196638812 1288931.8319490089 1287414.3039586744 1892553.0778714728 1007493.0769691727 1144567.653316073 1317027.865790756 1.040680023486778 0.7466608376163418 0.9263933722862364 1.0517812535668551 0.9786670923436552 0.9775148555309411 1.436987877804063 0.7649747610801418 0.8690534825008154 1.0 20.328854439909364 -5.079603709547256 5.5272664692247115 1.0155511972713844 0.8805289756687109 0.07183418734718372 0.1760547118728634 0.5393023161379009 28.011701917764718 0.04893662805061255 0.0875974563175449 8.32523095682712e-06 5.079603709547256 -0.13502222160267352 S(ph)RTSPITR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTSPITR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.447)RT(0.256)S(0.297)PITR 83.397 0.0046708999999999995 20778000000.0 287910.0 268130.0 223040.0 220750.0 280700.0 251040.0 207920.0 257780.0 303480.0 217180.0 True False 271939.05836564436 255248.6323286648 237417.51527661792 241730.0136290926 302789.493035473 249473.16624144017 228938.5827036513 256885.82134630406 248375.68210823173 215255.95416348314 1.2633288562095308 1.1857912749526451 1.1029544627430072 1.122988744113916 1.4066486300560572 1.1589605835105943 1.0635644602414875 1.193397053032056 1.1538620758410927 1.0 17.7156936187875 -9.666179749403076 0.33423461646324415 0.9277903642936173 1.203624599837395 0.2980584056650861 0.08889986368068031 14.35617022622349 1.5250494495591085 1.1826287126492396 0.08752388108048714 2.1568515287850769e-10 9.666179749403076 0.2758342355437776 S(ph)RTSPVSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTSPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.333)RT(0.333)S(0.333)PVSR 69.721 0.015297999999999999 18563000000.0 348190.0 341460.0 300350.0 281460.0 292460.0 303780.0 233810.0 278430.0 414140.0 252250.0 True False 328875.20660044363 325055.74905809114 319711.0415769916 308209.8737759652 315474.93813022575 301883.9963385302 257445.79656570204 277464.1913160505 338942.6156198205 250015.26124753043 1.3154205265687242 1.300143628977377 1.278766104043777 1.2327642410229451 1.2618227245651465 1.2074622758314204 1.0297203269956186 1.1097890182045484 1.3556877045367504 1.0 17.93165663594071 -6.4684286575615495 3.887219072206408 1.1311058576964987 1.2754694695159896 0.3835986212758521 0.09123505202239045 0.2648196458338106 8.11640474844453 0.034457295398508704 0.028902613639739425 3.400723655954814e-07 6.4684286575615495 0.14436361181949087 S(ph)RTSPVTR ddPTM_KYSE-520_SHP099_60min_R1 2 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.339)RT(0.317)S(0.317)PVT(0.027)R;S(0.483)RT(0.268)S(0.249)PVTR 95.775 0.0033479 104025000000.0 38265360.0 32242410.0 31987540.0 29679210.0 31449040.0 32529230.0 33060300.0 29612560.0 37774710.0 33409370.0 True False 36142704.200695984 30693436.226755925 34049508.01027359 32499913.19502016 33923900.52743959 32326203.009464804 36402357.76143481 29509840.940983463 30915774.8869469 33113388.973896552 1.0914830925094214 0.9269192063352897 1.028270106605971 0.9814734825432698 1.0244768529787744 0.9762275626619706 1.099324439130376 0.8911754989574222 0.9336336703959223 1.0 24.98091133443396 -7.2835004975934545 24.9837453478781 0.9343034441522209 1.0123804500179538 0.2851588199825077 0.05473362712798717 996.6110583222965 1128634.0223192459 0.02783066661534906 0.013386106334572575 5.2059441232949725e-08 7.2835004975934545 0.07807700586573296 S(ph)RTSVQT(ph)EDDQLIAGQSAR ddPTM_KYSE-520_SHP099_60min_R1 2 SRTSVQTEDDQLIAGQSAR 19 1 P35221;G3XAM7;P35221-2;P35221-3;P26232;P26232-5;P26232-2;P26232-3;P26232-4;P26232-6;A0A0A0MRI5;A0A0A0MTJ6 P35221 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 2 S(0.998)RT(0.011)S(0.449)VQT(0.542)EDDQLIAGQSAR;S(0.57)RT(0.43)S(0.424)VQT(0.576)EDDQLIAGQSAR 259.97 5.2103e-29 995740000.0 1165220.0 1065020.0 896090.0 970320.0 963780.0 1069860.0 933950.0 1057110.0 1348400.0 1000950.0 True False 1100582.9237915187 1013854.840572388 953853.3951946936 1062538.9210626532 1039624.0028419243 1063182.6068955828 1028362.780473622 1053443.1321413284 1103564.550397851 992082.3617273151 1.1093664863422157 1.0219462412446936 0.9614659346769747 1.0710188609871727 1.0479210627551472 1.0716676839657495 1.0365699665127994 1.0618504801427757 1.112371908796397 1.0 19.92010037118116 S(ph)RTSVQTEDDQLIAGQSAR ddPTM_KYSE-520_SHP099_60min_R1 4 SRTSVQTEDDQLIAGQSAR 19 1 P35221;G3XAM7;P35221-2;P35221-3;P26232;P26232-5;P26232-2;P26232-3;P26232-4;P26232-6;A0A0A0MRI5;A0A0A0MTJ6 P35221 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.475)RT(0.475)S(0.049)VQTEDDQLIAGQSAR;S(0.437)RT(0.437)S(0.127)VQTEDDQLIAGQSAR;S(0.328)RT(0.328)S(0.328)VQT(0.015)EDDQLIAGQSAR;S(0.333)RT(0.333)S(0.333)VQTEDDQLIAGQSAR 183.74 6.9263e-11 6146000000.0 2437660.0 2317450.0 2152880.0 1957120.0 2202840.0 2196450.0 2245030.0 2384190.0 2985630.0 2259120.0 True False 2302438.140445262 2206116.2234366317 2291658.0895297923 2143124.0963704153 2376190.9755549016 2182741.1408182415 2471979.541781351 2375919.8013641317 2443514.853607484 2239105.954368765 1.0282845865122767 0.9852665610272857 1.0234701422049688 0.9571338471897333 1.0612231059984756 0.974827089606658 1.1040029333842918 1.0611019977542493 1.0912904093885745 1.0 21.094491367378758 -6.759101698903142 24.999657531160103 1.069190668183725 1.005350438901505 0.36818120309475755 0.03766829835678864 59.459532793806844 635880.2880043467 0.013737379980188997 0.010125239775343103 1.7413990415699922e-07 6.759101698903142 -0.06384022928222 S(ph)RVFDLQFSTDS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 SRVFDLQFSTDSPR 14 1 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 2 S(1)RVFDLQFS(0.001)T(0.001)DS(0.998)PR;S(1)RVFDLQFS(0.001)T(0.001)DS(0.997)PR 120.32 6.7623e-05 184070000.0 148331.0 150509.0 149232.0 129531.0 136116.0 125651.0 123809.0 140219.0 177320.0 142964.0 True False 140102.78373948246 143278.32172138503 158851.7334996424 141841.58729508476 146827.55480590102 124866.76550112815 136324.8219793977 139732.61301636047 145123.15787344018 141697.45018430892 0.9887459764254597 1.0111566689098486 1.1210627523150243 1.0010172173923269 1.0362046361096777 0.8812209770797658 0.9620838046279384 0.986133574278205 1.024176212660675 1.0 17.112454271933743 S(ph)RVFDLQFSTDSPR ddPTM_KYSE-520_SHP099_60min_R1 1 SRVFDLQFSTDSPR 14 1 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 S(0.89)RVFDLQFS(0.055)T(0.055)DSPR 91.969 0.0050229 0.0 105540.0 107500.0 106280.0 88491.0 103610.0 106000.0 103700.0 93678.0 115740.0 92506.0 True False 99685.48581122607 102335.53863921028 113130.97885401238 96901.15803421079 111763.51753974112 105338.41468129642 114183.00801447032 93353.05288260953 94724.53356796746 91686.46880857891 1.087243157104756 1.1161465805043085 1.2338895839712714 1.056875232445902 1.2189750460679063 1.1488981531311862 1.2453637870257521 1.0181769905165623 1.0331353666344307 1.0 16.484421214534628 -7.287836750521066 24.228086677117457 1.0192420646236513 1.1575753516320182 0.5460318941793452 0.058943855333287 403.9051851690476 370709.95722678804 0.0312328494324285 0.015012451756215312 5.1542235327872734e-08 7.287836750521066 0.1383332870083669 S(ph)RVPVRPPQQYSDDEDDYEDDEEDDVQNTNSALR ddPTM_KYSE-520_SHP099_60min_R1 1 SRVPVRPPQQYSDDEDDYEDDEEDDVQNTNSALR 34 2 Q92560;F8W6N3 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 S(0.543)RVPVRPPQQYS(0.457)DDEDDYEDDEEDDVQNTNSALR 123.05 7.2139e-05 940080000.0 27396.0 22755.0 22468.0 13662.0 31683.0 26279.0 26864.0 15497.0 26082.0 26425.0 True False 25876.28926742797 21661.81564404867 23916.323230071062 14960.43237236992 34176.271848389304 26114.9830132999 29579.675287374434 15443.244524026984 21346.16627371459 26190.895058338905 0.9879879710025118 0.8270742788972298 0.9131541009499161 0.5712073733656795 1.304891328542357 0.9971015864532344 1.1293877212476775 0.5896417243331292 0.8150224047771973 1.0 14.676777743329671 -11.000852150203965 3.304015359080202 1.096539615908465 0.9040842230129449 0.018091228312528074 0.21230307455271513 0.2010076477554778 5.1842801156580045e-05 0.2736839121195766 0.05055350089079871 9.980397753980089e-12 11.000852150203965 -0.19245539289552016 S(ph)RVSSSPGVK ddPTM_KYSE-520_SHP099_60min_R1 1 SRVSSSPGVK 10 1 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 S(0.322)RVS(0.322)S(0.213)S(0.143)PGVK 65.563 0.019434 472620000.0 753680.0 667430.0 673760.0 478160.0 609580.0 555920.0 433570.0 491710.0 752690.0 492940.0 True False 711871.8679761677 635365.6609671458 717191.6476541162 523604.18263595336 657550.4779642442 552450.2970719467 477399.48683542776 490004.3727759768 616020.4697708085 488572.93510151736 1.4570431901395695 1.3004520212220256 1.4679315945020484 1.0717011627489295 1.3458594013760015 1.130742735385366 0.9771304395652454 1.002929834159074 1.260856722738458 1.0 18.898214420980363 -5.568090161381445 0.6922690988281095 1.0556623482014473 1.445132018949079 0.5449191113054968 0.12117810795590087 0.703854881181157 0.6765399808395702 0.07072806198804783 0.16716294495191453 2.7033970691184776e-06 5.568090161381445 0.3894696707476317 S(ph)S(ph)DES(ph)NFDVPPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSDESNFDVPPR 12 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 3 S(1)S(1)DES(1)NFDVPPR 79.885 0.021179 96784000.0 10645.0 9123.4 9897.7 10446.0 9698.7 11590.0 6218.6 7076.4 9878.8 8529.4 True False 10054.500629718601 8685.09816949741 10535.721578879933 11438.784699295575 10461.93251194563 11517.662510907787 6847.236775687411 7051.853620044177 8085.058944282327 8453.83615177279 1.1893417910175783 1.0273558670374898 1.2462651735532593 1.353088053036944 1.2375367021694332 1.3624184694533623 0.8099561728850788 0.8341601958497132 0.956377530760029 1.0 13.04539043567338 -6.7668740060416335 24.99981473908257 0.8863034448416234 1.2323756420976044 0.7257938041830478 0.10098141303217456 74.61068634619089 343211.9571080902 0.04441102633717972 0.030913749923273268 1.7105114826976225e-07 6.7668740060416335 0.34607219725598104 S(ph)S(ph)GKTPETLVPTAPK ddPTM_KYSE-520_SHP099_60min_R1 1 SSGKTPETLVPTAPK 15 1 Q14676;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 2 S(0.943)S(0.715)GKT(0.342)PET(0.001)LVPTAPK 81.723 0.0045652 190380000.0 230880.0 236890.0 238210.0 210230.0 218350.0 207080.0 198980.0 221320.0 235550.0 213700.0 True False 218072.62615213048 225509.44882086094 253565.39774947622 230210.19599204566 235532.902758445 205787.53690757405 219094.84025765967 220552.29257647655 192780.0577322857 211806.78425608427 1.0295828196346652 1.064694172157439 1.197154277376233 1.086887734973167 1.1120177457284595 0.971581423278526 1.0344089828244774 1.0412900292646838 0.9101694188379048 1.0 17.6923892746068 -6.256648191419199 24.91530606659535 0.996753034666234 1.10109702789046 0.5061214138387502 0.05246904129533834 349.0053625687617 1814913.1764290254 0.01802065188410815 0.017487447396642278 5.537985426991179e-07 6.256648191419199 0.10434399322422594 S(ph)S(ph)KASLGSLEGEAEAEASSPK ddPTM_KYSE-520_SHP099_60min_R1 1 SSKASLGSLEGEAEAEASSPK 21 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 S(0.504)S(0.528)KAS(0.52)LGS(0.448)LEGEAEAEASSPK 46.66 0.064635 522060000.0 213390.0 216100.0 154850.0 177940.0 158510.0 163340.0 141240.0 141420.0 209910.0 160180.0 True False 201552.83131758118 205718.2316272872 164831.87876876013 194851.3641003883 170983.83520147068 162320.53447210323 155517.91756956393 140929.4470276761 171795.635400484 158760.9298181541 1.2695367276346972 1.295773663349782 1.0382395653487273 1.2273256671120056 1.0769893789190879 1.0224211628013662 0.979572982771613 0.8876834318688968 1.0821027289098137 1.0 17.276496391371396 -5.265011899713862 0.5723319088764494 0.9688555556002276 1.3320498362640125 0.6408258281535253 0.07630271129947566 0.9196805072022576 0.48312263714605697 0.04963720393972614 0.19529447172448827 5.4323544658091335e-06 5.265011899713862 0.3631942806637849 S(ph)S(ph)KSFSLDEPPLFIPDNIATIR ddPTM_KYSE-520_SHP099_60min_R1 1 SSKSFSLDEPPLFIPDNIATIR 22 1 Q92576-2;Q92576;E7EVH3;D6R9X2;E9PE34;A0A1B0GX99 Q92576-2 PHF3 PHD finger protein 3 2 S(0.569)S(0.613)KS(0.544)FS(0.273)LDEPPLFIPDNIATIR 95.652 0.0013304999999999999 74176000.0 31699.0 46138.0 48225.0 46608.0 56216.0 60988.0 75099.0 101980.0 112090.0 77412.0 True False 29940.593279610122 43921.46122545011 51333.66066272819 51037.6103067938 60639.87937471368 60607.35126965009 82690.73981560952 101626.25518231087 91737.28155895504 76726.18990562468 0.39022650957173655 0.5724441846972295 0.6690500430931081 0.6651915124362551 0.790341335198612 0.7899173847182924 1.077738121980531 1.3245314970978483 1.1956449508543878 1.0 16.2274314944039 -6.3972736075909395 0.9213190804331615 1.2120451894128488 0.5465265204800509 0.8362364801505769 0.11312502181139887 0.21691493413102436 0.3874560675085225 0.07549901361243114 0.06073818854186176 4.006142492234795e-07 6.3972736075909395 -0.6655186689327979 S(ph)S(ph)LTY(ph)FQQQLKPGK ddPTM_KYSE-520_SHP099_60min_R1 1 SSLTYFQQQLKPGK 14 1 A0A0C4DGG3;Q8NHM5-2;Q8NHM5 A0A0C4DGG3 KDM2B Lysine-specific demethylase 2B 3 S(0.999)S(0.987)LT(0.487)Y(0.528)FQQQLKPGK 42.277 0.05943300000000001 0.0 202320.0 194240.0 156350.0 180870.0 189040.0 203710.0 170780.0 175440.0 213600.0 199670.0 True False 191096.90628507928 184908.41883981603 166428.57116884514 198059.83041945167 203916.3725095325 202438.57032761222 188044.1090521817 174831.4395880037 174815.62441781434 197901.07914090945 0.9656183135262973 0.9343477036229682 0.8409684873438448 1.0008021749008715 1.0303954551169479 1.0229280770291909 0.9501924389118193 0.883428429733424 0.8833485152111888 1.0 17.594419953760053 -3.782138555039832 14.186797372677688 0.949056120673351 21.380658721251436 0.005990050295542004 0.06153952772269066 528.6302706166334 34409.34767619277 0.016317777570044368 151.48591916667777 0.00016514348490398892 3.782138555039832 20.431602600578085 S(ph)S(ph)SPAPADIAQTVQEDLR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 2 S(0.656)S(0.689)S(0.656)PAPADIAQTVQEDLR;S(0.646)S(0.708)S(0.646)PAPADIAQTVQEDLR 65.949 0.020966 545140000.0 409010.0 336700.0 322370.0 285640.0 411340.0 392500.0 314030.0 346470.0 403360.0 380990.0 True False 386321.3999587788 320524.42660299607 343150.48601023684 312787.1397192029 443710.1177955517 390050.2619095171 345775.2170374552 345268.1764367058 330119.99187813513 377614.725005735 1.0230570324102473 0.8488133681707675 0.9087317397514763 0.8283234710046131 1.1750339391262163 1.032931811394784 0.9156825572207327 0.9143398113817253 0.8742243615450151 1.0 18.526555497819164 -3.941459808340195 19.129630159887675 0.9453281020423075 2.0474034806739536 0.05567472509633509 0.09729724743517341 107.76032394213941 201026.59859623763 0.024802349858381607 22894.577845677708 0.00011443007739079164 3.941459808340195 1.1020753786316462 S(ph)S(ph)SSQTLTQFDSNIAPADPDTAIVHPVPIR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSSQTLTQFDSNIAPADPDTAIVHPVPIR 30 0 Q96D71;Q96D71-3;H0YE73 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 2 S(0.483)S(0.483)S(0.483)S(0.483)QT(0.068)LT(0.001)QFDSNIAPADPDTAIVHPVPIR;S(0.591)S(0.633)S(0.574)S(0.157)QT(0.042)LT(0.003)QFDSNIAPADPDTAIVHPVPIR 127.78 6.865e-05 296980000.0 55791.3 65798.0 65793.0 48749.0 51468.0 43664.0 25378.0 55721.0 65534.0 51944.0 True False 52696.4453718008 62636.965315188434 70034.122052522 53382.09030307874 55518.23878713825 43391.4767796616 27943.455905412025 55527.71685637914 53634.677577701565 51483.81657182047 1.0235535918027503 1.2166340703939307 1.3603133317597706 1.036871270578982 1.0783629203108849 0.8428177953576932 0.5427619350331304 1.0785470183415284 1.041777419567965 1.0 15.65183138619944 -5.87623571110193 2.077074495911517 0.8893372947833774 1.191040538214524 0.3526245487213804 0.16520434476451548 0.3507555984244604 3.096417655087035 0.06138921720719385 0.07322886419786087 1.329732516590413e-06 5.87623571110193 0.3017032434311465 S(ph)SDDLLAGMAGGVTVTNGVK ddPTM_KYSE-520_SHP099_60min_R1 4 SSDDLLAGMAGGVTVTNGVK 20 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 S(0.5)S(0.5)DDLLAGMAGGVTVTNGVK;S(0.5)S(0.5)DDLLAGMAGGVTVTNGVK;S(0.5)S(0.5)DDLLAGMAGGVTVTNGVK;S(0.5)S(0.5)DDLLAGMAGGVTVTNGVK 309.37 4.9746e-51 328930000.0 518834.0 446270.0 373972.0 348555.0 408839.0 419334.0 347625.0 454048.0 527785.0 458671.0 True False 490053.24375006236 424830.51933507324 398078.83349635656 381681.5624031183 441012.3033242951 416716.78096195025 382766.3274930595 452473.0134636001 431952.5483771355 454607.5317806387 1.0779699179874724 0.9344995180151707 0.8756538457185992 0.839584775263448 0.9700945815765681 0.9166517310650898 0.8419709325840105 0.99530470093912 0.950165842359086 1.0 18.79426206086394 S(ph)SDEDAAGEPK ddPTM_KYSE-520_SHP099_60min_R1 2 SSDEDAAGEPK 11 0 E9PHH9;Q9BUI4 E9PHH9 POLR3C DNA-directed RNA polymerase III subunit RPC3 1 S(0.993)S(0.007)DEDAAGEPK;S(0.992)S(0.008)DEDAAGEPK 214.0 1.0062000000000001e-11 1800330000.0 2774200.0 2581100.0 2313300.0 2583200.0 2602700.0 2539300.0 2616000.0 2723100.0 3016000.0 2626000.0 True False 2620309.595769406 2457100.0816899138 2462419.01941087 2828706.5513326 2807517.682662719 2523451.2867944925 2880450.8096996523 2713654.20167632 2468370.4271728867 2602735.6829970875 1.006752092764211 0.94404518205265 0.9460887770883285 1.086820521120033 1.0786795220903191 0.9695380530875506 1.1067012407432675 1.042616128638736 0.9483753741488351 1.0 21.31159737772724 -5.245063802158991 24.712177088653775 1.037321979213018 0.9634703279840394 0.2711936085318484 0.05045187835929199 880.4818344924778 1328721.9206235423 0.013670846188430417 0.023581174474514292 5.687693668548855e-06 5.245063802158991 -0.07385165122897852 S(ph)SDIVSSVR ddPTM_KYSE-520_SHP099_60min_R1 4 SSDIVSSVR 9 0 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.987)S(0.013)DIVSSVR;S(0.973)S(0.027)DIVSSVR;S(0.991)S(0.009)DIVSSVR;S(0.993)S(0.007)DIVSSVR 219.35 5.1554e-09 1834230000.0 4288910.0 3502970.0 3384410.0 3367780.0 3375470.0 3537960.0 3340870.0 3608840.0 4205270.0 3491800.0 True False 4050995.6125698867 3334682.063134831 3602574.4838474607 3687852.798640019 3641100.285202878 3515878.2793003726 3678597.743349119 3596321.7763495864 3441698.9742298797 3460865.3685792964 1.1705152270146937 0.9635399554718118 1.0409461507964803 1.065586899774117 1.052077991319717 1.0158957095588088 1.0629126971382892 1.0391394617658576 0.9944619647665507 1.0 21.722701389515525 -6.713896643387565 0.00836614506324152 1.393329079020895e-07 2.0723485289500694 0.17995478101950424 0.04830967757805581 4835.658216728848 23.36467279412384 2852.675209826202 2932.200145547938 1.932428155839773e-07 6.713896643387565 2.0723483896171615 S(ph)SDKLNLVTK ddPTM_KYSE-520_SHP099_60min_R1 3 SSDKLNLVTK 10 1 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 S(0.911)S(0.089)DKLNLVTK;S(0.984)S(0.016)DKLNLVTK;S(0.965)S(0.035)DKLNLVTK 134.61 0.00045742 1527290000.0 1773920.0 1696140.0 1711350.0 1669670.0 1683420.0 1470720.0 1458300.0 1717420.0 1941530.0 1613290.0 True False 1675517.1213781515 1614654.888441957 1821666.359256813 1828354.9347954097 1815895.5766504284 1461540.6909441173 1605719.1956364687 1711462.6708688396 1588997.0939883874 1598997.505720627 1.0478547436026417 1.009791999465486 1.1392552851017956 1.1434382656972422 1.135646284721408 0.9140356290208461 1.0042036900569224 1.0703347971124741 0.9937458240575975 1.0 20.608736257681326 -6.24229228883298 24.99801037345886 1.001343635232436 1.0955802940148751 0.46509654896089814 0.052811667407296405 869.7856992666653 1135573.8575555885 0.019110429597581663 0.019081447600033524 5.724106575493412e-07 6.24229228883298 0.09423665878243903 S(ph)SDPLGDTASNLGSAVDELMR ddPTM_KYSE-520_SHP099_60min_R1 12 SSDPLGDTASNLGSAVDELMR 21 0 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 S(0.498)S(0.498)DPLGDT(0.002)AS(0.001)NLGSAVDELMR;S(0.5)S(0.5)DPLGDTASNLGSAVDELMR;S(0.5)S(0.5)DPLGDTASNLGSAVDELMR;S(0.5)S(0.5)DPLGDTASNLGSAVDELMR;S(0.5)S(0.5)DPLGDTASNLGSAVDELMR;S(0.498)S(0.498)DPLGDT(0.004)ASNLGSAVDELMR;S(0.5)S(0.5)DPLGDTASNLGSAVDELMR;S(0.5)S(0.5)DPLGDTASNLGSAVDELMR;S(0.5)S(0.5)DPLGDTASNLGSAVDELMR;S(0.5)S(0.5)DPLGDTASNLGSAVDELMR;S(0.5)S(0.5)DPLGDTASNLGSAVDELMR;S(0.5)S(0.5)DPLGDTASNLGSAVDELMR 262.98 1.689e-35 865576000.0 268579.5 267919.3 232732.4 201040.9 224299.4 245285.69999999998 223711.9 230539.19999999998 296777.0 231837.0 True False 253680.85973504034 255048.05467293216 247734.702889006 220147.76669084933 241950.4866909894 243754.78096218934 246326.88206974312 229739.51332345392 242889.77793935247 229783.10454645683 1.1040013591763094 1.1099512959246634 1.0781241004554352 0.9580676835460744 1.0529515961086364 1.060803758584904 1.0719973627127208 0.9998102940462531 1.0570393259276631 1.0 17.80991319808168 -5.010891807453881 23.71916000297277 1.031683261422582 1.1037417120985846 0.48444002168500133 0.033235669007067155 228.0318714094051 496594.08187748527 0.008940490361967373 0.01684133941416925 9.75232559873616e-06 5.010891807453881 0.0720584506760027 S(ph)SDQDSTNKEAEAAGVKPAGVRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSDQDSTNKEAEAAGVKPAGVRPR 24 3 Q92625;A0A3B3ISP1;A0A3B3ITU5 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.86)S(0.14)DQDSTNKEAEAAGVKPAGVRPR 118.15 0.00028404 1034500000.0 688940.0 672120.0 664390.0 563920.0 559510.0 606350.0 542730.0 566060.0 775570.0 532250.0 True False 650723.1248321595 639830.3463273118 707217.6424615865 617514.787251269 603540.2538235747 602565.5447358872 597594.4449343631 564096.4699793968 634746.0385286716 527534.6790842343 1.233517246604095 1.2128687870113402 1.3406088177734024 1.1705671906219213 1.1440769256559231 1.1422292573862662 1.1328059910141794 1.069306895536482 1.203230922430634 1.0 19.008906411286645 -1.0020548751728633 0.06380780909020967 0.7780530656757908 2.0161466489719797 0.5998707333262883 0.055755551900735494 205.32956211183378 0.977182571628405 3.632822626234659 23.282913252828347 0.09952796510896314 1.0020548751728633 1.2380935832961888 S(ph)SDSWEVWGSASTNR ddPTM_KYSE-520_SHP099_60min_R1 2 SSDSWEVWGSASTNR 15 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 S(0.5)S(0.5)DS(0.001)WEVWGSASTNR;S(0.718)S(0.282)DSWEVWGSASTNR 403.78 1.8278999999999995e-83 1040210000.0 668900.0 750130.0 703150.0 703860.0 724320.0 677200.0 757030.0 807310.0 916200.0 786060.0 True False 631794.7835809093 714092.6288319147 748476.1740797791 770754.6427767746 781319.8631829476 672973.343605415 833557.9803008151 804509.6300375714 749841.1755224784 779096.1199454267 0.8109330381791203 0.9165655052703058 0.9606981153136888 0.989293391463384 1.0028542604443682 0.863787312472503 1.0699039039742662 1.0326192230220899 0.9624501474542095 1.0 19.571441804282195 -3.1587794277087893 0.7694428979684143 0.9930929459543454 6.54903931381961e-11 0.5431138472164989 0.050132950636959384 9.694603086181393 1.2135874723070008 0.018985796659256496 12.240494706268166 0.000693778077050438 3.1587794277087893 -0.993092945888855 S(ph)SDSYPLAPVR ddPTM_KYSE-520_SHP099_60min_R1 1 SSDSYPLAPVR 11 0 Q52LW3 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 S(0.984)S(0.015)DSYPLAPVR 144.7 7.7896e-05 242540000.0 129640.0 153020.0 104940.0 117380.0 131640.0 153290.0 138550.0 121030.0 152550.0 156280.0 True False 122448.6107690671 145668.6895122975 111704.6003099366 128535.7599084163 141999.31907085722 152333.2602499618 152555.9861176939 120610.1751786144 124850.76547255427 154895.4807840001 0.7905241014734331 0.9404321467288691 0.7211611322973802 0.8298225310243743 0.9167428149106143 0.9834583906446485 0.9848963013351654 0.7786552233037958 0.8060323312250611 1.0 17.2409355272433 -5.734347228997625 7.315323555538443 0.9078524674164339 0.8215485821063818 0.21503842219800073 0.08515162205523075 0.3396230645133166 65.44207319274844 0.026866107097784177 0.034021856958160554 1.8435408740384236e-06 5.734347228997625 -0.08630388531005206 S(ph)SDTEENVK ddPTM_KYSE-520_SHP099_60min_R1 1 SSDTEENVK 9 0 H0YBT0;A0A087WUS5;P01106;P01106-2;A0A494C1T8 H0YBT0 MYC Myc proto-oncogene protein 1 S(0.951)S(0.049)DTEENVK 131.83 0.0024424 0.0 1216600.0 947370.0 946030.0 1067800.0 1106400.0 1097000.0 1138900.0 1045100.0 1154400.0 1206000.0 True False 1149112.7727680274 901856.9231686388 1007012.6075015176 1169283.3909542242 1193467.3854451259 1090153.2160885115 1254031.126592866 1041474.7920281739 944790.0600558274 1195315.7782538016 0.9613466112249679 0.7544926115558623 0.8424657532527764 0.9782213304859011 0.9984536364011056 0.9120211043152808 1.0491212024531624 0.8712967828046501 0.7904104314895272 1.0 20.188960368734435 -5.247894725708548 23.33379177177482 0.9428944221701142 0.842940720758982 0.1927595334911032 0.08369826468550284 506.42355171216724 872425.8816880564 0.023044704581976425 0.039574785860009405 5.650739338367843e-06 5.247894725708548 -0.09995370141113225 S(ph)SDYQFPS(ph)SPFTDTLK ddPTM_KYSE-520_SHP099_60min_R1 1 SSDYQFPSSPFTDTLK 16 0 Q9UK61;Q9UK61-3 Q9UK61 FAM208A Protein FAM208A 2 S(0.979)S(0.021)DYQFPS(0.594)S(0.406)PFTDTLK 234.49 3.216e-18 0.0 256850.0 237380.0 231780.0 265970.0 287160.0 303340.0 310570.0 340010.0 333820.0 283120.0 True False 242602.01848221922 225975.90848535576 246720.90966111203 291247.70883320365 309757.85828310065 301446.74254174 341965.44647110946 338830.58466893056 273206.70291739143 280611.777064027 0.8645468163186355 0.8052973073678052 0.8792250711730388 1.0379026564047236 1.1038662080544945 1.074248364397618 1.2186425318602485 1.2074710057219724 0.9736109645000897 1.0 18.098216033484857 -5.323112943392982 2.106622443434662 1.112502938724953 0.8314764204360043 0.6858119583808172 0.07465925078222106 0.1736635778448597 1.5050108241176954 0.0231176010933439 0.04234757247644266 4.752116254937348e-06 5.323112943392982 -0.28102651828894865 S(ph)SDYQFPSSPFTDTLK ddPTM_KYSE-520_SHP099_60min_R1 6 SSDYQFPSSPFTDTLK 16 0 Q9UK61;Q9UK61-3 Q9UK61 FAM208A Protein FAM208A 1 S(0.924)S(0.076)DYQFPSSPFTDTLK;S(0.834)S(0.163)DY(0.002)QFPSSPFTDTLK;S(0.498)S(0.498)DY(0.004)QFPSSPFTDTLK;S(0.971)S(0.029)DYQFPSSPFTDTLK;S(0.78)S(0.201)DY(0.002)QFPS(0.014)S(0.004)PFTDTLK;S(0.92)S(0.08)DYQFPSSPFTDTLK 252.38 1.1676999999999999e-23 891099000.0 1505610.0 1383120.0 1295881.0 1543050.0 1461090.0 1680650.0 1661900.0 1900180.0 2067030.0 1713410.0 True False 1422090.8119408742 1316672.8390945534 1379415.5627429103 1689701.0080651024 1576069.470535085 1670160.4399445357 1829901.0705809866 1893588.7190853457 1691709.4575859306 1698230.5204128097 0.8373956272998728 0.775320442818619 0.8122663832514322 0.9949774119324897 0.9280656845997389 0.9834709833966176 1.0775339676124593 1.1150363253541387 0.9961600838352064 1.0 20.695600875143004 -5.536204276872629 0.909805761675612 1.0497988121311523 0.7832202543347622 0.7692389002352682 0.05126297797462805 0.2948619713953189 0.4988321581658579 0.02416127753262896 0.05217540496672461 2.9093483408911225e-06 5.536204276872629 -0.26657855779639017 S(ph)SEDLAGPLPSSVSSSSTTSSKPK ddPTM_KYSE-520_SHP099_60min_R1 3 SSEDLAGPLPSSVSSSSTTSSKPK 24 1 Q9NRF2-2;Q9NRF2-3;Q9NRF2 Q9NRF2-2 SH2B1 SH2B adapter protein 1 1 S(0.973)S(0.027)EDLAGPLPSSVSSSSTTSSKPK;S(0.975)S(0.025)EDLAGPLPSSVSSSSTTSSKPK;S(0.5)S(0.5)EDLAGPLPSSVSSSSTTSSKPK 249.96 5.2912e-29 23510000000.0 9833900.0 9163800.0 7935100.0 8686000.0 8002800.0 7633800.0 8478200.0 8819300.0 10214600.0 8246900.0 True False 9288393.963606354 8723557.292855771 8446609.242608894 9511514.82845888 8632574.830296693 7586154.622585662 9335259.19525827 8788707.906740088 8359886.129111451 8173838.881991112 1.1363563801178989 1.0672533944944544 1.033371144765131 1.1636533293328037 1.0561224603186496 0.9281018052973546 1.1420899445211772 1.075224020637803 1.022761305893886 1.0 22.962582375388482 -1.0000000380085308 0.062350490586679505 0.9217944932529597 1.3678149753097235 0.1653934158036453 0.06239293045852793 689.5220129652218 3.210739022964478 4.496021337530439 27.67407478960658 0.09999999124821275 1.0000000380085308 0.4460204820567638 S(ph)SEMLVK ddPTM_KYSE-520_SHP099_60min_R1 8 SSEMLVK 7 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 S(0.99)S(0.01)EMLVK;S(0.949)S(0.051)EMLVK;S(0.91)S(0.09)EMLVK;S(0.984)S(0.016)EMLVK;S(0.98)S(0.02)EMLVK;S(0.994)S(0.006)EMLVK;S(0.996)S(0.004)EMLVK;S(0.994)S(0.006)EMLVK 141.48 0.0016269000000000001 8288620000.0 12564100.0 11644400.0 10799010.0 10592280.0 11135350.0 11601260.0 10719580.0 11026040.0 13204820.0 11136740.0 True False 11867144.327087605 11084985.545399252 11495131.463626912 11598967.106514879 12011638.693525303 11528852.23307112 11803219.759419035 10987793.240737094 10807157.554423422 11038077.147852618 1.0751097467547848 1.0042496892274175 1.0414070593684164 1.0508141002413067 1.0882002845814576 1.0444620089753567 1.0693184692693753 0.995444504831595 0.9790797264472716 1.0 23.395985538241664 -7.314687109008174 7.013775383693735 0.9898353842466702 1.0518894841797302 0.623454450975816 0.022004897702518334 0.18061399586483726 20.078899595482536 0.012484390853592223 0.005969949089439337 4.8452131919176426e-08 7.314687109008174 0.06205409993305999 S(ph)SEPVVIMK ddPTM_KYSE-520_SHP099_60min_R1 2 SSEPVVIMK 9 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 S(0.994)S(0.006)EPVVIMK;S(0.994)S(0.006)EPVVIMK 172.27 7.2157e-05 278930000.0 327860.0 470720.0 446950.0 503580.0 434250.0 494830.0 667540.0 910900.0 937300.0 644700.0 True False 309672.95222729346 448105.9046348748 475761.11214528466 551440.0917931523 468423.0044554831 491741.582422131 735021.4577625789 907740.300505658 767109.9474101944 638988.4595690107 0.4846299609795204 0.701273861717497 0.7445535283472557 0.8629891252888845 0.7330695843418334 0.7695625406972205 1.15028909639204 1.420589506605357 1.2005067320427039 1.0 19.28543035009593 -6.7832133466906415 3.673231271360828 1.242157514583095 0.7187369174402509 0.7629285103552542 0.13028049385473645 0.10469513020909166 3.0012868409463627 0.05654791906002038 0.03881123874636334 1.6473529323872128e-07 6.7832133466906415 -0.5234205971428441 S(ph)SETLTFK ddPTM_KYSE-520_SHP099_60min_R1 2 SSETLTFK 8 0 Q9NPF5;Q5TG37;Q5TG36;Q5TG38;Q5TG39;Q5TG40 Q9NPF5 DMAP1 DNA methyltransferase 1-associated protein 1 1 S(0.964)S(0.036)ETLTFK;S(0.985)S(0.013)ET(0.002)LTFK 131.12 0.0011108 0.0 310630.0 338230.0 278954.0 266471.0 289340.0 259160.0 257710.0 311140.0 339710.0 286560.0 True False 293398.73467444687 321980.92310641945 296935.82118218095 291796.3237225727 312109.41188059765 257542.48630947908 283761.841807224 310060.7279606222 278027.2273922086 284021.3013403064 1.0330166550532935 1.133650615594606 1.0454702509316396 1.0273747861360247 1.098894380131851 0.9067717283672989 0.9990864786131954 1.0916812453764375 0.978895688739501 1.0 18.115639609045587 -6.197038734513053 24.99991482749383 1.0012526953243575 1.0678731000783825 0.329864117363212 0.05124070313515675 280.81380421227465 109009.64197339302 0.017273595142250065 0.017273590670815287 6.352742695226374e-07 6.197038734513053 0.06662040475402509 S(ph)SFLQVFNNSPDESSYYR ddPTM_KYSE-520_SHP099_60min_R1 3 SSFLQVFNNSPDESSYYR 18 0 F5H365;Q15436-2;Q15436 F5H365 SEC23A Protein transport protein Sec23A 1 S(0.5)S(0.5)FLQVFNNSPDESSYYR;S(0.5)S(0.5)FLQVFNNSPDESSYYR;S(0.5)S(0.5)FLQVFNNSPDESSYYR 197.1 1.0526e-12 169871000.0 237298.0 258837.0 196425.0 172529.0 173735.0 238797.0 217987.0 246323.0 283681.0 263532.0 True False 224134.60689816496 246402.08199774224 209086.86979111226 188926.1042872647 187406.95608307057 237306.5793457507 240023.25330810362 245468.5630052202 232171.68141605819 261197.3115047938 0.8581045708583084 0.943356118706528 0.8004939583280315 0.7233079973099084 0.7174919029732474 0.9085337746341826 0.918934624270428 0.9397821194676236 0.8888746981294909 1.0 17.994780521785692 -6.448897753208577 8.990312170958997 0.9293455595797243 0.8108351100355773 0.46846795917322814 0.06567072027735439 0.4455919332386051 51.390686397670656 0.026020009815017064 0.022901084464685875 3.55715055396211e-07 6.448897753208577 -0.11851044954414702 S(ph)SFSITR ddPTM_KYSE-520_SHP099_60min_R1 3 SSFSITR 7 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.728)S(0.271)FSITR;S(0.666)S(0.334)FSITR;S(0.62)S(0.38)FS(0.001)ITR 149.19 0.003676 480150000.0 1002970.0 1088180.0 954640.0 845900.0 1120540.0 871340.0 885770.0 988790.0 1284900.0 885340.0 True False 947333.254728873 1035902.1994085199 1016177.6218780058 926294.0816708913 1208720.1229995326 865901.6438528375 975312.2758821339 985360.1182753198 1051594.5496931155 877496.5763840965 1.0795862687379965 1.180519932826594 1.1580416940945488 1.0556099095997329 1.3774642038836324 0.9867863501199762 1.1114713175304989 1.1229218948473816 1.1984030228658271 1.0 19.743033971086692 S(ph)SFSSDPDESEGIPLKR ddPTM_KYSE-520_SHP099_60min_R1 1 SSFSSDPDESEGIPLKR 17 1 P46013-2 P46013-2 MKI67 Antigen KI-67 1 S(0.5)S(0.5)FSSDPDESEGIPLKR 155.88 1.1816e-06 492590000.0 564230.0 523630.0 502930.0 543960.0 530030.0 571920.0 565970.0 792000.0 804020.0 589990.0 True False 532931.0371353803 498474.02881534654 535349.6725164516 595657.7948524618 571740.3455418298 568350.435137048 623183.7709349054 789252.73685419 658030.2356948084 584763.1476052742 0.9113622144586965 0.8524374883347224 0.9154983085182761 1.0186308718184507 0.9777297832177431 0.9719327174849516 1.0657028807081492 1.3496964370725872 1.1252936139864116 1.0 19.157492868418007 -6.903139770838346 3.286416927081044 1.1827154405559341 0.9401222916253978 0.52697171540306 0.09154341589697029 0.17271768011569258 3.691638635157714 0.042154092515088684 0.026688417940059574 1.2498567187841814e-07 6.903139770838346 -0.2425931489305363 S(ph)SGDEGKKPPSGIGR ddPTM_KYSE-520_SHP099_60min_R1 1 SSGDEGKKPPSGIGR 15 2 Q8IVL0-3;Q8IVL0-2;Q8IVL0;H0YHA8;A0A2R8YFX5 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.5)S(0.5)GDEGKKPPSGIGR 54.974 0.056505999999999994 0.0 154690.0 122390.0 145830.0 147000.0 165670.0 117040.0 144290.0 119060.0 170780.0 144560.0 True False 146109.03733313017 116510.20068886477 155230.43513624975 160970.83580283832 178707.28646664313 116309.50994621635 158876.24133469549 118647.00864881276 139770.65701345672 143279.31086597807 1.019749721366255 0.8131683491822986 1.0834113745944147 1.1234757818831829 1.2472651172492308 0.8117676532867402 1.1088568222058703 0.8280819326371125 0.9755117900043272 1.0 17.128470777924225 -7.255721265393026 24.995200466000185 0.9263476469547008 1.027006640983879 0.09567074843659784 0.1331564046232637 1134.9340153048206 4961082.649605374 0.06626491144009465 0.03687384579760437 5.54981791625677e-08 7.255721265393026 0.1006589940291781 S(ph)SGFISELPSEEGK ddPTM_KYSE-520_SHP099_60min_R1 4 SSGFISELPSEEGK 14 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.678)S(0.322)GFISELPSEEGK;S(0.732)S(0.268)GFISELPSEEGK;S(0.675)S(0.325)GFISELPSEEGK;S(0.869)S(0.131)GFISELPSEEGK 357.66 4.447399999999999e-67 1278810000.0 3053620.0 2886580.0 2727860.0 2731670.0 2991050.0 2811280.0 2845220.0 2935680.0 3353010.0 2730140.0 True False 2884229.6113594472 2747904.3639550894 2903702.2203303184 2991287.095493468 3226428.6182534774 2793733.758728631 3132842.604271275 2925496.8112728656 2744187.906503635 2705953.0836167787 1.0658830815737514 1.0155033287872968 1.073079292435192 1.105446769792221 1.1923446262937534 1.0324398363162026 1.1577593947356675 1.0811336046383497 1.0141298912824281 1.0 21.367705395105666 -10.319859610685603 4.245350307928781 0.9998905840533492 1.0844372450171185 0.16490717642275354 0.05508580045544811 5.832744791475801e-05 9.344561326056446e-06 0.05453107028813259 0.013208625189423116 4.787848385031251e-11 10.319859610685603 0.08454666096376928 S(ph)SGFLNLIK ddPTM_KYSE-520_SHP099_60min_R1 3 SSGFLNLIK 9 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.997)S(0.003)GFLNLIK;S(0.99)S(0.01)GFLNLIK;S(0.994)S(0.006)GFLNLIK 136.96 0.00046495 655623000.0 671817.0 695189.0 696337.0 683697.0 701753.0 614764.0 695595.0 758610.0 966568.0 733025.0 True False 634549.971776013 661791.0769400365 741223.9971985928 748675.3573190024 756976.9686716135 610927.0298408729 765912.5309529939 755978.5589709046 791063.616396432 726530.9687848205 0.8733970044488911 0.910891765628289 1.0202235404202349 1.0304796209461244 1.0419059905150585 0.8408822969552087 1.0542049325633593 1.0405317755901546 1.088822982617723 1.0 19.47066476928054 -4.676071452820542 3.9802191950107195 1.013028200459751 0.8817994654376787 0.383015980707344 0.06277888538840867 0.23218411377694836 6.810448004036126 0.01699170325825622 0.049818050990457136 2.1082812538952892e-05 4.676071452820542 -0.13122873502207233 S(ph)SGGREDLESSGLQR ddPTM_KYSE-520_SHP099_60min_R1 1 SSGGREDLESSGLQR 15 1 Q9UK76-3;Q9UK76;J3KSH8;J3KT51;Q9UK76-2 Q9UK76-3 HN1 Hematological and neurological expressed 1 protein;Hematological and neurological expressed 1 protein, N-terminally processed 1 S(0.481)S(0.481)GGREDLES(0.015)S(0.023)GLQR 78.244 0.022147 0.0 273040.0 235630.0 238620.0 197770.0 250320.0 219680.0 222120.0 248640.0 283540.0 224820.0 True False 257893.92690825395 224309.98111215958 254001.8270054989 216566.00133828112 270018.75987402746 218308.89563384137 244574.0572822965 247777.52587301197 232056.2834617375 222828.26970731342 1.1573662859160534 1.0066495665329735 1.1398994720873261 0.971896436761557 1.2117796374252652 0.979718129663672 1.09758989558886 1.1119662967291788 1.041413119468841 1.0 17.765572750109897 -8.002397246173642 6.324876097826309 1.0000272971391753 1.0811425729732622 0.11643020122458791 0.0743804975262631 0.24850654369136058 53.38510802108856 0.0647636460571148 0.016794843992354504 9.944953431497344e-09 8.002397246173642 0.08111527583408695 S(ph)SGPYGGGGQYFAK ddPTM_KYSE-520_SHP099_60min_R1 2 SSGPYGGGGQYFAK 14 0 F8W6I7;P09651-3;P09651-2;P09651;Q32P51;H0YH80 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 1 S(0.577)S(0.421)GPY(0.002)GGGGQYFAK;S(0.904)S(0.096)GPYGGGGQYFAK 133.48 1.1979000000000002e-05 2790000000.0 1816360.0 1667130.0 1575650.0 1733190.0 1616830.0 1666350.0 1680600.0 1759890.0 1933700.0 1755360.0 True False 1715602.8899761075 1587038.5723868534 1677218.9201291369 1897911.856497424 1744065.3224957008 1655949.6915488506 1850491.4490753973 1753785.3523514129 1582588.8246101497 1739808.8760494145 0.986086985526668 0.9121913298836267 0.9640248094018231 1.0908737635636243 1.002446502316939 0.9517997720008287 1.0636176620028 1.0080333400377488 0.9096337226441421 1.0 20.73049739912215 -5.015254670713309 24.77829420159511 1.0061542363588134 0.9463813720518414 0.1710949106247549 0.05054770876369627 936.6779422039243 1521460.8161021164 0.013616318011698738 0.024646400297749865 9.654845518634517e-06 5.015254670713309 -0.05977286430697204 S(ph)SGPYGGGGQYFAKPR ddPTM_KYSE-520_SHP099_60min_R1 4 SSGPYGGGGQYFAKPR 16 1 F8W6I7;P09651-3;P09651-2;P09651;H0YH80 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.969)S(0.031)GPYGGGGQYFAKPR;S(0.5)S(0.5)GPYGGGGQYFAKPR;S(0.892)S(0.108)GPYGGGGQYFAKPR;S(0.908)S(0.092)GPYGGGGQYFAKPR 195.97 1.6401e-12 3829160000.0 3072260.0 2923940.0 2988820.0 2870260.0 2692390.0 2678340.0 2747510.0 2816660.0 3533710.0 2690250.0 True False 2901835.613401525 2783469.5334765804 3181484.119481079 3143048.6474248674 2904265.775396427 2661623.4865802233 3025255.1239135726 2806889.6638733842 2892077.3415799364 2666416.477982829 1.0882904592596852 1.0438990144488993 1.193168488775581 1.1787538343607207 1.0892018555156595 0.9982024595774207 1.134577118351072 1.052682387410396 1.0846307639712092 1.0 21.34647070751303 -5.995773243682775 24.963612767764335 1.0602745541749181 1.1260849193013125 0.2802483986151312 0.0539581948149714 181.43190008534907 1071538.570509764 0.017382465170684355 0.019627964136889175 1.009779980555051e-06 5.995773243682775 0.06581036512639438 S(ph)SGSEGS(ph)SPNWLQALK ddPTM_KYSE-520_SHP099_60min_R1 1 SSGSEGSSPNWLQALK 16 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 S(0.657)S(0.136)GS(0.207)EGS(0.5)S(0.5)PNWLQALK 92.575 0.0019311 34107000.0 169460.0 156350.0 141280.0 142100.0 141150.0 137420.0 136520.0 134900.0 175280.0 144530.0 True False 160059.71598986513 148838.71131386558 150387.13485599234 155605.141276077 152257.70196635902 136562.3108066393 150320.77390680293 134432.06338589682 143453.57044922528 143249.57664263842 1.117348614503501 1.0390167622286959 1.0498260335607121 1.0862520150007964 1.0628841322595526 0.9533173780144446 1.0493627794922207 0.9384464969223717 1.001424044743223 1.0 17.128171349708914 -6.189096656385209 7.4227856556742 0.9885631114379972 1.0693305536167794 0.5934739775859992 0.034159287549334 0.20206779560781035 18.363167451116343 0.010794800282555443 0.01079005232112599 6.469986040043097e-07 6.189096656385209 0.08076744217878218 S(ph)SIDSQASLSGPLSGGAPGAGAR ddPTM_KYSE-520_SHP099_60min_R1 1 SSIDSQASLSGPLSGGAPGAGAR 23 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(0.5)S(0.5)IDSQASLSGPLSGGAPGAGAR 126.52 1.0790999999999999e-07 0.0 145690.0 132310.0 135870.0 140650.0 137170.0 179680.0 145140.0 134730.0 181430.0 173760.0 True False 137608.28527418541 125953.62899864111 144628.3975996865 154017.33371203538 147964.4986094614 178558.55047108835 159812.16762989605 134262.65307621844 148486.885478109 172220.62158323434 0.7990232761277036 0.7313504494452636 0.8397855975092244 0.8943025074241687 0.8591566866337784 1.0368012194450877 0.9279502428961953 0.7795968441057404 0.86218992890085 1.0 17.393898374863987 -5.042851937878727 2.6178990114715464 0.9041915890417168 0.7649443799103121 0.3969414517171437 0.07036676669725404 0.30621382781760825 4.14698524892182 0.021107037372344102 0.04699204221284237 9.060414410015059e-06 5.042851937878727 -0.13924720913140476 S(ph)SILLDVKPWDDETDMAK ddPTM_KYSE-520_SHP099_60min_R1 2 SSILLDVKPWDDETDMAK 18 1 P24534 P24534 EEF1B2 Elongation factor 1-beta 1 S(0.5)S(0.5)ILLDVKPWDDETDMAK;S(0.5)S(0.5)ILLDVKPWDDETDMAK 263.32 5.0889e-30 285920000.0 291930.0 254815.0 247082.0 262188.0 266970.0 252101.0 251868.0 311020.0 305960.0 261447.0 True False 275736.06095197285 242573.30491488735 263009.3010651779 287106.26869030343 287979.02014848613 250527.54414688252 277329.27543479856 309941.144212614 250405.376623944 259130.78298268834 1.0640806845800093 0.9361037778791911 1.014967415441139 1.1079589440729782 1.1113269401409753 0.9667996262860805 1.0702289872420367 1.1960799895908936 0.9663281750693152 1.0 17.98332088253889 -5.017040516054592 22.756695225136394 1.0662896299847193 0.9939530873780648 0.10257226474611447 0.0729212163037399 397.48955257579985 530832.9990240434 0.019261652209845295 0.034543096137228856 9.615225721592225e-06 5.017040516054592 -0.07233654260665456 S(ph)SISGSLPSSGSLQAVSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSISGSLPSSGSLQAVSSR 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.643)S(0.357)ISGSLPSSGSLQAVSSR 149.73 1.4652000000000002e-06 480530000.0 583680.0 549530.0 407140.0 401840.0 316330.0 386350.0 357040.0 560790.0 506400.0 619000.0 True False 551302.106862767 523129.7539386536 433384.8958470323 440030.7527823987 341223.37132850435 383938.6463407439 393133.08757460455 558844.7503793701 414450.5253051557 613516.141574713 0.8985942985097977 0.8526748010181696 0.7063952624533439 0.7172276700870021 0.5561766809471153 0.6258003992450595 0.6407868692183861 0.9108884225034115 0.6755332047847751 1.0 19.226741776048616 -9.426522299280007 17.538229869173584 0.9999992067490201 0.7282994857604481 0.33423912794965693 0.11357187299357288 0.0 0.0 0.11842239544975833 0.028721649698706934 3.7452231632338785e-10 9.426522299280007 -0.271699720988572 S(ph)SISSISGR ddPTM_KYSE-520_SHP099_60min_R1 1 SSISSISGR 9 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 S(0.717)S(0.283)ISSISGR 213.25 0.00016811 0.0 757660.0 613290.0 559290.0 643520.0 629940.0 662630.0 732870.0 662120.0 731630.0 704560.0 True False 715631.0894422344 583826.6278329418 595342.7282956406 704679.9473186567 679512.6941316916 658494.2803798809 806955.6517219358 659823.2602599695 598784.434891412 698318.1465393848 1.0247923428435108 0.8360467656843488 0.8525379603064109 1.0091101753703504 0.9730703655620488 0.9429717438149692 1.1555702164134207 0.9448748590163635 0.8574665256212711 1.0 19.413524937610376 -5.270389146633595 24.70214269973973 0.986069953515537 0.8976177961251719 0.1520295262108201 0.08468418526191364 939.6932225743723 2593634.5236639725 0.0243076411659833 0.036659779351497494 5.3655080818607715e-06 5.270389146633595 -0.08845215739036505 S(ph)SITEPEGPNGPNIQK ddPTM_KYSE-520_SHP099_60min_R1 3 SSITEPEGPNGPNIQK 16 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 S(0.5)S(0.5)ITEPEGPNGPNIQK;S(0.5)S(0.5)ITEPEGPNGPNIQK;S(0.572)S(0.428)ITEPEGPNGPNIQK 373.06 3.925899999999999e-72 1638070000.0 2137020.0 1963860.0 2109820.0 2215950.0 2448620.0 1944760.0 2523390.0 2670830.0 2861670.0 2461320.0 True False 2018475.240556245 1869513.2177860418 2245822.3730313573 2426553.2217503395 2641312.4632579964 1932622.0314679074 2778478.887113155 2661565.5141064064 2342062.864830181 2439514.6196779846 0.8274085444188415 0.766346388214233 0.9206021373742803 0.9946868947523028 1.0827204895401075 0.7922158022250397 1.1389474220408293 1.0910225717186857 0.960052809660691 1.0 21.218162698488392 -4.992896524135012 2.7254963252717666 1.0117489128848218 0.7961030238691983 0.4633804446724775 0.09024592120580419 0.23503376689336022 3.5098217700016576 0.02544355022809392 0.05895065419011435 1.016490855148593e-05 4.992896524135012 -0.21564588901562354 S(ph)SKASLGS(ph)LEGEAEAEASSPK ddPTM_KYSE-520_SHP099_60min_R1 1 SSKASLGSLEGEAEAEASSPK 21 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 S(0.465)S(0.465)KAS(0.141)LGS(0.929)LEGEAEAEASSPK 65.887 0.01816 122080000.0 423210.0 395810.0 369700.0 291410.0 360130.0 332430.0 278550.0 268290.0 483580.0 295860.0 True False 399733.6976517812 376794.69347707805 393531.4535409149 319105.51878438843 388470.18214059406 330355.1810613526 306708.5523860243 267359.3646093566 395774.06205976906 293238.9105755972 1.3631673125068768 1.2849409811865335 1.3420164901324112 1.0882100133233268 1.3247565999275739 1.126573483760733 1.045934019410956 0.9117458664832653 1.3496642082147492 1.0 18.161717025281902 -5.590558748588126 0.591137393223532 1.0626072212679814 1.3754610992656993 0.3735254064016805 0.1261518859179955 1.1980007530860584 0.8126648471042823 0.0857129117451412 0.2120484226788355 2.5670909249268947e-06 5.590558748588126 0.3128538779977179 S(ph)SKELLLQPVTISR ddPTM_KYSE-520_SHP099_60min_R1 4 SSKELLLQPVTISR 14 1 F8WDD7;H7C0A3;F8WCF6;A0A0A6YYG9;P59998;P59998-3;P59998-2 F8WDD7 ARPC4;ARPC4-TTLL3 Actin-related protein 2/3 complex subunit 4 1 S(0.5)S(0.5)KELLLQPVTISR;S(0.5)S(0.5)KELLLQPVTISR;S(0.873)S(0.127)KELLLQPVTISR;S(0.5)S(0.5)KELLLQPVTISR 108.14 0.00054207 810938000.0 899350.0 889810.0 765157.0 690842.0 847519.0 905999.0 726700.0 774848.0 1015900.0 813048.0 True False 849461.262690223 847062.191967961 814480.2445144865 756499.4159707797 914213.9235765255 900344.3241777353 800161.9279085404 772160.2331388819 831438.1687549519 805845.0272617727 1.0541248428083705 1.0511477558485935 1.010715729402781 0.9387653833905667 1.134478581673434 1.117267332699275 0.992947652264427 0.9581994143001039 1.0317593837864132 1.0 19.620142893962 -6.927992105447405 24.99983829652645 0.9920966908991481 1.0485344682739817 0.2035945709251975 0.053303663627188844 76.24455665346206 26469.022942660755 0.02409290672788075 0.01624343171836861 1.1803420915725791e-07 6.927992105447405 0.056437777374833575 S(ph)SLAELMAR ddPTM_KYSE-520_SHP099_60min_R1 1 SSLAELMAR 9 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.706)S(0.294)LAELMAR 223.31 3.5764e-09 71676000.0 149130.0 138020.0 145950.0 146370.0 147030.0 147050.0 129570.0 159350.0 173420.0 155700.0 True False 140857.46161671545 131389.3120277563 155358.17052825657 160280.9607922549 158600.4245137354 146132.20640457203 142668.2000813396 158797.25204256963 141931.29956244104 154320.61913276694 0.9127585309616422 0.8514047751112112 1.0067233490982628 1.0386231061862192 1.027733205096115 0.946938958810487 0.924492144232506 1.0290086505287495 0.9197170174669467 1.0 17.235571311026025 -4.765192020097797 24.999991164117 0.9873751978454003 0.8820816405402753 0.4850442528846216 0.04309448675339648 73.71669441667505 491112.33854334604 0.011592121577204762 0.025696268267946475 1.7171489945436908e-05 4.765192020097797 -0.10529355730512502 S(ph)SLEGPTILDIEK ddPTM_KYSE-520_SHP099_60min_R1 4 SSLEGPTILDIEK 13 0 Q7L576;Q7L576-2;A0A0G2JR96;A0A0G2JQT1 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 1 S(0.5)S(0.5)LEGPTILDIEK;S(0.5)S(0.5)LEGPTILDIEK;S(0.748)S(0.252)LEGPTILDIEK;S(0.729)S(0.271)LEGPTILDIEK 225.13 1.245e-11 401437000.0 1752400.0 1543840.0 1293660.0 1245200.0 1380870.0 1434960.0 1375660.0 1383590.0 1501090.0 1456760.0 True False 1655190.8786772068 1469671.609048917 1377051.3935291837 1363543.4336169683 1489536.612924449 1426003.882368615 1514725.1379477922 1378790.6492223328 1228529.8953995174 1443854.2397421293 1.1463697879730725 1.017880869547745 0.9537329708399952 0.9443774836028431 1.0316391862314844 0.987637008721391 1.049084524084869 0.9549375631355858 0.8508683643987023 1.0 20.461493675666066 -4.304349773322816 2.8303724696262824 0.9746418971302174 1.1688290018097713 0.5076231404573601 0.05175904145122127 0.3191829342844086 3.7820006425275765 0.013844974325500567 0.13598789902858005 4.961925355286098e-05 4.304349773322816 0.1941871046795539 S(ph)SLGSHQLPR ddPTM_KYSE-520_SHP099_60min_R1 3 SSLGSHQLPR 10 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.611)S(0.388)LGSHQLPR;S(0.815)S(0.185)LGSHQLPR;S(0.943)S(0.057)LGSHQLPR 132.69 0.00031983 1438990000.0 826090.0 1180850.0 1085130.0 2040680.0 872140.0 846060.0 881770.0 865400.0 1131420.0 834520.0 True False 780265.1409304114 1124120.1935080152 1155079.216069387 2234625.613647185 940772.4562021991 840779.4257099789 970907.9168458965 862398.1293858787 925982.6487771707 827126.8020467347 0.943344042291504 1.3590663375027467 1.3964959341314178 2.701672353159852 1.1373981037420706 1.0165060830207178 1.1738320103318787 1.0426431923761443 1.1195171604714247 1.0 19.657748992056817 -5.963505593231646 24.99999989822262 1.0793238944217376 1.6122729132077505 0.2683044521554473 0.4203642900817562 244.44047109584017 167449.6093019506 0.1357211837944237 0.15389296206990635 1.087663129645025e-06 5.963505593231646 0.5329490187860129 S(ph)SLGSLQTPEAVTTR ddPTM_KYSE-520_SHP099_60min_R1 1 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.778)S(0.222)LGSLQTPEAVTTR 268.18 3.6599999999999997e-25 1407500000.0 779560.0 798670.0 631000.0 508800.0 469220.0 610360.0 496120.0 503840.0 631170.0 611380.0 True False 736316.2527856678 760300.6943718886 671675.2696356969 557156.1990237013 506144.944503401 606550.5168384531 546272.6512646002 502092.29663713975 516565.4385008982 605963.6488464422 1.2151162106627593 1.2546968713705087 1.1084415227123743 0.9194548222229922 0.835272784872387 1.0009684871248103 0.9014940950740622 0.828584845960579 0.8524693510646568 1.0 19.208871724897485 -5.1094322860273875 2.5381915980584564 0.8969877386058327 1.2343503595004417 0.8451678593864974 0.05792194820501935 0.10203750041590783 1.2776340651454825 0.016961135149159857 0.035724797886640985 7.772624979263269e-06 5.1094322860273875 0.337362620894609 S(ph)SLLSLMTGK ddPTM_KYSE-520_SHP099_60min_R1 1 SSLLSLMTGK 10 0 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 S(0.5)S(0.5)LLSLMTGK 71.555 0.023252000000000002 8590500.0 83187.0 89637.0 64887.0 68173.0 67650.0 85577.0 83648.0 84744.0 85043.0 80658.0 True False 78572.45128082675 85330.70397211994 69069.71984287073 74652.14142304017 72973.67012415301 85042.88219982365 92103.95616580913 84450.0428433982 69601.3349595702 79943.43287097449 0.9828506039719304 1.0673885384661963 0.8639824105920809 0.9338120561263081 0.9128163190331043 1.0637882205669036 1.1521140994090313 1.0563724850257206 0.870632301616369 1.0 16.286691904767082 -6.267957678043168 24.535103906872685 1.0398254960056823 0.9526518212863292 0.17130310053388864 0.08218862812614106 706.6584060786507 2659879.467483687 0.030170216800645955 0.027236629522518464 5.395632003368774e-07 6.267957678043168 -0.08717367471935311 S(ph)SLPGSLR ddPTM_KYSE-520_SHP099_60min_R1 1 SSLPGSLR 8 0 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 S(0.906)S(0.094)LPGSLR 98.009 0.006618300000000001 0.0 228290.0 212340.0 190280.0 183880.0 200240.0 176990.0 169560.0 189010.0 227820.0 183680.0 True False 215626.29861516765 202138.86767116183 202545.75325876448 201355.89991446206 215997.74879024975 175885.339758893 186700.7795461288 188354.36842526565 186453.6308748432 182052.7381008775 1.1844166743357996 1.11033137858742 1.1125663660523006 1.1060306041806878 1.1864570181337395 0.9661230124505622 1.0255312910628993 1.0346143122598703 1.0241737247122704 1.0 17.473996913735313 -6.26271202529982 24.999999999983284 1.013217038006502 1.1349074713244827 0.8050611259556504 0.03188663860006933 53.200043885529254 1045055.9555549991 0.010998610404318593 0.010218525008053255 5.461198656326228e-07 6.26271202529982 0.12169043331798068 S(ph)SLPNGEGLQLK ddPTM_KYSE-520_SHP099_60min_R1 1 SSLPNGEGLQLK 12 0 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 S(0.626)S(0.374)LPNGEGLQLK 83.204 0.0058705 1552300000.0 3165900.0 2293800.0 2160900.0 2475900.0 2412500.0 2507300.0 2761500.0 2982700.0 2887200.0 2467300.0 True False 2990281.2159348154 2183602.404936005 2300195.071562247 2711208.791593524 2602350.024752682 2491651.0106642856 3040659.3696428146 2972353.7098674155 2362957.2603891087 2445441.6415303517 1.2227980276247787 0.8929276282256777 0.94060517842609 1.1086785902185161 1.0641636179566065 1.0188961242620438 1.2433988683287396 1.2154670385048827 0.9662701494321392 1.0 21.221663605670557 -5.889612557465902 1.4232431777992094 1.1121057769784262 1.016526662015565 0.025194530882875932 0.11781966446711865 1.0135145168608817 4.268094853508918 0.0474675080566863 0.05862526529541248 1.2893993369112213e-06 5.889612557465902 -0.09557911496286109 S(ph)SLSLAK ddPTM_KYSE-520_SHP099_60min_R1 1 SSLSLAK 7 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.832)S(0.168)LSLAK 119.07 0.0025807 348930000.0 961960.0 1090300.0 892740.0 839630.0 798610.0 832700.0 815200.0 859310.0 1004100.0 1144900.0 True False 908598.1611802818 1037920.3514263347 950287.4488345038 919428.1827560351 861456.0635306699 827502.8104256187 897608.3715853047 856329.2541744628 821780.7513011581 1134757.0767187227 0.800698387189261 0.914663034688973 0.8374369002239374 0.8102422990960011 0.7591546078052817 0.7292334433537403 0.7910136803736355 0.7546366281765211 0.7241909023184321 1.0 20.113952054749284 -5.346892239334778 2.6569475708876937 0.7780116572886607 0.8595544168527255 0.07657949844439971 0.0790934965579403 0.4945098647742392 6.80491283251197 0.022063549912433294 0.036974678331594124 4.498914717617767e-06 5.346892239334778 0.08154275956406476 S(ph)SLVFKPTLPEQK ddPTM_KYSE-520_SHP099_60min_R1 3 SSLVFKPTLPEQK 13 1 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 S(0.493)S(0.493)LVFKPT(0.013)LPEQK;S(0.5)S(0.5)LVFKPTLPEQK;S(0.5)S(0.5)LVFKPTLPEQK 97.76700000000001 0.0015169 605127000.0 1673410.0 1734570.0 1656930.0 1732010.0 1880680.0 1618300.0 1706050.0 2069330.0 2195440.0 2107820.0 True False 1580582.6114398695 1651238.6535573502 1763738.3589817337 1896619.7096522036 2028678.8163945612 1608199.589422096 1878514.183443463 2062151.9772152551 1796803.4385386072 2089146.3546591473 0.75656863767103 0.7903891701387079 0.8442387748700807 0.9078443477272059 0.9710563416824611 0.7697879020469489 0.8991778767696484 0.987078752341266 0.8600658515529244 1.0 20.994482132933086 -1.455874229255652 0.23906364345155542 0.9563856400404639 4.678407727261033e-33 0.4643337253557004 0.06226228386427064 39.62836140176697 0.6404696732451766 0.08937428009865034 14.374028828736696 0.03500465250690483 1.455874229255652 -0.9563856400404639 S(ph)SLYGIAK ddPTM_KYSE-520_SHP099_60min_R1 1 SSLYGIAK 8 0 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7 Q5VZ89-5 DENND4C DENN domain-containing protein 4C 1 S(0.647)S(0.353)LYGIAK 73.985 0.018304 322620000.0 763040.0 852150.0 769930.0 779390.0 758260.0 738880.0 731360.0 794050.0 914910.0 952250.0 True False 720712.6501174716 811211.4348967739 819560.9197315556 853462.9912678517 817930.7480907651 734268.3758463804 805293.0061857566 791295.6258826634 748785.4070042253 943813.8058392901 0.7636174059528352 0.8595036752777746 0.8683502134224005 0.9042705096996397 0.8666229960086428 0.7779801177981597 0.853232916496328 0.838402257931585 0.7933613625606641 1.0 19.84814274939769 -10.485813485220305 3.115847731853357 1.0040038155922197 0.8395407955111652 0.5716579482449224 0.042458532154456136 19877889.49220284 23567417.4096471 683322.8682236847 0.010944347074073553 3.2672812071412993e-11 10.485813485220305 -0.1644630200810545 S(ph)SMEMEGIFNHK ddPTM_KYSE-520_SHP099_60min_R1 12 SSMEMEGIFNHK 12 0 E7EPJ7;O75962-4;O75962;O75962-5;O75962-2;E7EWP2 E7EPJ7 TRIO Triple functional domain protein 1 S(0.5)S(0.5)MEMEGIFNHK;S(0.574)S(0.426)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.707)S(0.293)MEMEGIFNHK;S(0.682)S(0.318)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.872)S(0.128)MEMEGIFNHK;S(0.878)S(0.122)MEMEGIFNHK;S(0.853)S(0.147)MEMEGIFNHK;S(0.5)S(0.5)MEMEGIFNHK;S(0.857)S(0.143)MEMEGIFNHK 297.52 4.1899e-30 16995110000.0 8169140.0 7428330.0 7187140.0 7274650.0 7659750.0 7239810.0 7395940.0 7664760.0 9056220.0 7679600.0 True False 7715981.519423144 7071461.876649349 7650434.544230589 7966030.548796729 8262528.746984199 7194623.660318829 8143593.792618535 7638172.736528437 7411838.736727996 7611564.718638394 1.0137181781466122 0.9290418117753767 1.0051066800361055 1.0465693774225366 1.0855230235055078 0.945222687616568 1.0698974644040489 1.0034957356172625 0.9737601939557408 1.0 22.85976163011931 -4.985264020621386 24.321263662808523 1.020354633928296 0.9703035201476551 0.14500716823699822 0.04414789882056547 286.5327190102022 472904.0305032411 0.011263578827423645 0.02343054218952106 1.0345130640013223e-05 4.985264020621386 -0.05005111378064098 S(ph)SMGSTAVATDVK ddPTM_KYSE-520_SHP099_60min_R1 1 SSMGSTAVATDVK 13 0 Q6UXY1;B0QYF0;Q6UXY1-2 Q6UXY1 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 S(0.493)S(0.493)MGS(0.013)T(0.002)AVATDVK 86.291 0.0032435000000000003 239130000.0 343760.0 314310.0 298250.0 272920.0 304530.0 309130.0 319060.0 345240.0 354470.0 336430.0 True False 324690.94753142906 299210.07581107144 317475.6722168724 298858.23474360985 328494.7784613201 307200.60500404856 351313.6985255245 344042.4430196216 290107.18346152944 333449.49193857895 0.9737335200115909 0.8973175339735878 0.9520952344871201 0.8962623784673789 0.9851410375572817 0.9212807709439683 1.053573950534722 1.0317677829390541 0.8700183700233883 1.0 18.347108725357476 -6.717599630878427 24.999580439095563 0.9914877661875211 0.9367412273521627 0.18440189891790304 0.05261461517476062 217.59627055461766 124083.63188880544 0.01968259709974972 0.01524597219801819 1.9160214605592283e-07 6.717599630878427 -0.054746538835358405 S(ph)SPAAFINPPIGTVTPALK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPAAFINPPIGTVTPALK 19 0 F6VRR5;Q9BY77-2;Q9BY77;Q6R954;F8WEE2;Q8WUT1;F8WCX5 F6VRR5 POLDIP3;PDIP46 Polymerase delta-interacting protein 3 1 S(0.5)S(0.5)PAAFINPPIGTVTPALK;S(0.5)S(0.5)PAAFINPPIGTVTPALK 326.47 5.400100000000001e-54 918700000.0 660280.0 743400.0 625620.0 515890.0 538880.0 659010.0 606180.0 722710.0 787880.0 683760.0 True False 623652.9521644525 707685.9481338514 665948.4662273927 564920.0304920156 581286.7901922179 654896.8741426532 667458.5901466882 720203.0876917818 644820.8528385182 677702.4183572308 0.920246018416467 1.0442429139463623 0.9826561750239433 0.8335812521687576 0.8577316155979979 0.9663487341983242 0.9848844744639188 1.0627128783715627 0.9514808201534555 1.0 19.370292394104634 -6.679775848346739 3.2830707364006972 1.0063482563588528 0.9308991184991533 0.23063586080695686 0.061092634047609035 0.4064887776488056 8.742135627393623 0.028469387011426216 0.020716468966176727 2.0903747539509907e-07 6.679775848346739 -0.07544913785969953 S(ph)SPAFGDRR ddPTM_KYSE-520_SHP099_60min_R1 1 SSPAFGDRR 9 1 P13716;P13716-2 P13716 ALAD Delta-aminolevulinic acid dehydratase 1 S(0.5)S(0.5)PAFGDRR 154.15 0.00014206 283780000.0 231380.0 199410.0 200020.0 188130.0 206150.0 202070.0 171880.0 190190.0 269280.0 197520.0 True False 218544.89015540556 189830.04427948772 212913.60924331553 206009.8186366529 222372.83216694964 200808.80617593924 189255.30778714688 189530.2752806795 220385.53999639096 195770.12646823487 1.1163342134882162 0.9696578722407324 1.0875694524203228 1.0523046715714284 1.135887462396012 1.0257377353664934 0.9667221000536818 0.9681266427103838 1.1257363111125644 1.0 17.57880110820241 -6.505221811965361 24.453111208780587 1.0101672550365075 1.067820913212414 0.1786291215086755 0.058624065847000036 992.4232776907143 1374412.482878634 0.020665174253510436 0.017840102322438565 3.124483158116046e-07 6.505221811965361 0.0576536581759064 S(ph)SPAFTK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPAFTK 7 0 Q5VVQ6-2;Q5VVQ6 Q5VVQ6-2 YOD1 Ubiquitin thioesterase OTU1 1 S(0.53)S(0.47)PAFTK 87.258 0.018811 0.0 610610.0 514480.0 483310.0 419460.0 548850.0 497080.0 429580.0 465550.0 496910.0 480870.0 True False 576738.246079143 489763.6085497759 514464.93592334125 459325.3522847528 592041.372470678 493977.5393375364 473006.13869677996 463935.11571018706 406683.6700817234 476609.8659111983 1.2100845730008463 1.0275985529872107 1.0794256953530963 0.963734461112339 1.242192860063427 1.0364400207980042 0.9924388321095103 0.9734064460105557 0.8532842040611398 1.0 18.86244929032471 -6.856041940309707 2.131503503887729 0.9374540842659546 1.0932827391068987 0.4127182407835768 0.0841100521511845 0.32811837005920375 3.029133740491264 0.04315183223263769 0.02590436929872332 1.3930222707119613e-07 6.856041940309707 0.1558286548409441 S(ph)SPAS(ph)SPELPWRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSPASSPELPWRPR 14 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 2 S(0.878)S(0.122)PAS(0.773)S(0.227)PELPWRPR 174.95 1.0141999999999999e-08 357480000.0 119980.0 111350.0 117100.0 118000.0 129250.0 118440.0 124910.0 140540.0 153510.0 123010.0 True False 113324.47022579961 106000.5788602424 124648.4533666245 129214.6845220063 139421.23966809703 117700.77202691267 137537.12180412238 140052.4995422825 125636.4536721849 121920.22710033195 0.9294968761216412 0.8694257005690387 1.0223771422607948 1.0598297558588987 1.143544783207818 0.965391673114692 1.1280910893558196 1.148722430011789 1.0304808042130265 1.0 16.89557796968562 -4.914372905784475 3.554395264693374 1.0742127149946226 0.8995293680184238 0.5543185796731348 0.059154973971631795 0.15589289402948925 3.858572873927355 0.015705977615290904 0.03631590490308904 1.2179433660333092e-05 4.914372905784475 -0.1746833469761988 S(ph)SPASS(ph)PELPWRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSPASSPELPWRPR 14 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 2 S(0.837)S(0.163)PAS(0.163)S(0.837)PELPWRPR 119.46 7.1555e-05 271370000.0 68403.0 60008.0 42708.0 46035.0 63618.0 62771.0 50636.0 55639.0 59519.0 47297.0 True False 64608.549232000165 57125.12560615566 45461.026015216055 50410.15255907255 68624.37466309477 62379.22290527983 55754.78103973689 55446.00129524024 48711.84995189089 46877.9853765092 1.3782279403238997 1.2185917365549024 0.9697734586946821 1.0753481011223947 1.4638934269876454 1.3306720074309846 1.1893595808764406 1.1827726991660465 1.0391199528019959 1.0 15.516622949527763 -7.742888636352955 2.2319136986068635 0.9973452535448609 1.2278457511722805 0.2828361921750836 0.13425868367210628 0.4485099277949792 4.2076303288256165 0.13776588316420846 0.039895790255118295 1.8076375887424428e-08 7.742888636352955 0.23050049762741953 S(ph)SPASSPELPWRPR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPASSPELPWRPR 14 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.5)S(0.5)PASSPELPWRPR;S(0.5)S(0.5)PASSPELPWRPR 79.86 0.0064283000000000005 373780000.0 345070.0 312840.0 299130.0 247408.0 319740.0 281830.0 278260.0 283270.0 344290.0 336220.0 True False 325928.27922000905 297810.6968175865 318412.3984249222 270921.58193407214 344901.7189282585 280070.99443046964 306389.2363558971 282287.40248571476 281775.61484461266 333241.3523752014 0.9780547248921302 0.8936786947205669 0.9555008589282669 0.8129890843470035 1.0349907551087132 0.8404448980723542 0.9194214168562396 0.8470959575505598 0.8455601708378535 1.0 18.346207912249827 S(ph)SPATADKR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPATADKR 9 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.852)S(0.135)PAT(0.013)ADKR;S(0.992)S(0.008)PATADKR 109.24 0.00059932 0.0 415650.0 320300.0 252160.0 305230.0 387920.0 440720.0 486490.0 414410.0 493770.0 593130.0 True False 392593.06592226774 304912.30721989804 268414.6370702652 334238.967429254 418447.0970371238 437969.3030032171 535669.156884857 412972.50843402155 404113.8149287654 587875.3296481568 0.6678168756583723 0.5186683159546566 0.4565842850233421 0.5685541654372466 0.7117956409015569 0.7450037123778295 0.9111951631061893 0.7024831415891963 0.6874141413122871 1.0 19.16515071050434 -5.908264078556903 2.202532455612828 0.7971275568973601 0.539269026190611 0.5895313933472777 0.10074869698582684 0.22734494426773966 2.24665311092455 0.035251576505710876 0.04098261470952532 1.2351961275534914e-06 5.908264078556903 -0.25785853070674913 S(ph)SPATSLFVELDEEEVK ddPTM_KYSE-520_SHP099_60min_R1 3 SSPATSLFVELDEEEVK 17 0 A0A087WTL4;A0A087WX97;Q9BXK5-4;Q9BXK5 A0A087WTL4 BCL2L13 Bcl-2-like protein 13 1 S(0.5)S(0.5)PATSLFVELDEEEVK;S(0.5)S(0.5)PATSLFVELDEEEVK;S(0.5)S(0.5)PATSLFVELDEEEVK 348.06 3.6533000000000002e-59 270013000.0 509040.0 571940.0 444720.0 522910.0 509860.0 535990.0 483860.0 588770.0 785520.0 512880.0 True False 480802.5364539183 544463.1439005571 473387.3627771584 572607.2091813753 549983.0812934308 532644.6875946048 532773.2908185306 586727.6942899516 642889.3693477595 508336.2822146018 0.9458355684533655 1.0710688238277348 0.9312484261694127 1.1264338769736695 1.0819276540666973 1.0478195364574445 1.0480725249385452 1.1542117193245232 1.2646930621339243 1.0 18.955423680440592 -5.3689211396335255 0.5573998511573297 1.1284914102374148 0.9571167347425954 0.27352036842741156 0.08031196603150716 1.9756322236464283 1.0388033333400115 0.056078213547091256 0.19220290752951122 4.276405312259881e-06 5.3689211396335255 -0.17137467549481944 S(ph)SPELLPSGVTDENEVTTAVTEK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPELLPSGVTDENEVTTAVTEK 23 0 P42566;B1AUU8;P42566-2 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 S(0.5)S(0.5)PELLPSGVTDENEVTTAVTEK 104.18 0.00074185 341480000.0 272040.0 260320.0 238050.0 189080.0 182980.0 275220.0 202800.0 230310.0 316700.0 247200.0 True False 256949.39890170476 247813.83645171367 253395.08389346703 207050.1063510253 197379.48498621595 273502.2498923245 223301.00313726705 229511.10836475831 259195.26335731198 245010.00031868962 1.048730250061162 1.0114437620071712 1.0342234339980847 0.845067981232239 0.8055976683787613 1.1162901495309352 0.9113954648659841 0.9367417985642562 1.0578966696060215 1.0 17.90248110985136 -5.1235533147518675 18.54296275455266 0.9487670156754641 1.0295354741931306 0.14278541482850993 0.0872422155250676 5.187684081564507 754.6695683514562 0.024254541124187477 0.04201075662005199 7.523963590079798e-06 5.1235533147518675 0.08076845851766656 S(ph)SPEQPIGQGR ddPTM_KYSE-520_SHP099_60min_R1 3 SSPEQPIGQGR 11 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 S(0.641)S(0.359)PEQPIGQGR;S(0.877)S(0.123)PEQPIGQGR;S(0.633)S(0.367)PEQPIGQGR 200.05 1.5197e-05 0.0 2261460.0 2295090.0 2244700.0 1906990.0 2101600.0 2298420.0 2007160.0 1879740.0 2344500.0 2054520.0 True False 2136012.305691255 2184830.431399678 2389396.9536469853 2088229.7562425479 2266983.963531706 2284074.7082243897 2210063.320793868 1873219.6206746139 1918797.9000354218 2036318.551192375 1.0489578383698877 1.0729315558807542 1.1733905543648186 1.0254926740316617 1.1132757014879937 1.1216686637200943 1.085322981269191 0.9199050018857522 0.9422876881968499 1.0 20.95753183617839 -7.251597788577376 22.71474212262445 0.9483222608659914 1.093456912654572 0.6852944701397565 0.04263728104131181 100.40285232101832 231735.09405703624 0.01999386795778686 0.011326295604363644 5.6027624770689374e-08 7.251597788577376 0.14513465178858054 S(ph)SPEQPRPSTSK ddPTM_KYSE-520_SHP099_60min_R1 4 SSPEQPRPSTSK 12 1 P29590-12;P29590-13;P29590-11;H3BT57;H3BUJ5;H3BRN3;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4;H3BVD2 P29590-12;P29590-2 PML Protein PML 1 S(0.713)S(0.287)PEQPRPSTSK;S(0.5)S(0.5)PEQPRPSTSK;S(0.932)S(0.068)PEQPRPSTSK;S(0.962)S(0.038)PEQPRPSTSK 229.63 2.4778e-11 31892300000.0 17534500.0 15105100.0 14098110.0 14026560.0 15016300.0 13972300.0 14138220.0 14467500.0 17188300.0 13075560.0 True False 16561826.330840856 14379428.322782677 15006896.728373539 15359640.045160953 16197997.378940409 13885093.692938486 15567449.253330233 14417315.619239874 14067338.00178241 12959720.711031739 1.2779462382042606 1.1095477011740258 1.1579645165963475 1.1851829516732042 1.2498724116139435 1.071403775014923 1.201217958352969 1.1124711666793392 1.0854661389275027 1.0 23.627531291913154 -7.963683694573949 0.6648155129606155 0.9974386073579947 1.183849775033508 0.5125385800048076 0.056684957834681485 0.6423280347645762 0.6654320156440797 0.05497262038473483 0.022809329217483118 1.0872171775171868e-08 7.963683694573949 0.18641116767551325 S(ph)SPFKVS(ph)PLTFGR ddPTM_KYSE-520_SHP099_60min_R1 3 SSPFKVSPLTFGR 13 1 O95810 O95810 SDPR Serum deprivation-response protein 2 S(0.814)S(0.186)PFKVS(0.67)PLT(0.33)FGR;S(0.623)S(0.378)PFKVS(0.901)PLT(0.099)FGR;S(0.513)S(0.487)PFKVS(0.927)PLT(0.073)FGR 144.18 3.1944e-05 558930000.0 1844440.0 1740160.0 1722100.0 1672910.0 1690060.0 1678140.0 1587200.0 1592920.0 1926250.0 1603050.0 True False 1742125.2364000154 1656560.1015665878 1833109.3214574237 1831902.8634212688 1823058.1068739952 1667666.1057855736 1747649.6655792405 1587394.532310323 1576491.5568109297 1588848.2241540295 1.096470518653597 1.0426169576068922 1.153734695101824 1.1529753664146567 1.1474085939484049 1.049606929367662 1.099947521110623 0.9990850656333267 0.9922228774559766 1.0 20.599549886132426 -7.1582125565400085 1.4780436326766975 0.9882762164719464 1.1135670139013696 0.6376530954384376 0.03735691396354791 0.29132265892645137 1.17009514650422 0.030581526302168437 0.012741061703221658 6.946842354002635e-08 7.1582125565400085 0.12529079742942317 S(ph)SPGAGPSDHHSASR ddPTM_KYSE-520_SHP099_60min_R1 3 SSPGAGPSDHHSASR 15 0 I3VM54;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 S(0.5)S(0.5)PGAGPSDHHSASR;S(0.5)S(0.5)PGAGPSDHHSASR;S(0.5)S(0.5)PGAGPSDHHSASR 120.82 0.0029660999999999997 21422000.0 84467.2 90418.1 126018.1 71712.0 73789.0 96812.9 73172.6 75707.2 79030.3 92585.5 True False 79781.63603481135 86074.27875566494 134141.42836208903 78527.48691900104 79595.77449802095 96208.65478017814 80569.60050375729 75444.58939339334 64680.38971173781 91765.26450042892 0.8694099719446506 0.9379832251806196 1.4617887181207008 0.8557430455467601 0.8673845700913215 1.048421265976174 0.8779967119626261 0.8221475718956894 0.7048461099508462 1.0 16.485660539547432 -6.365468484905162 0.9505500150656204 0.8328878558189778 1.0465316639284372 0.14104650637383365 0.18014229407595211 1.046061025976107 1.9907350229093812 0.11668946503529204 0.09639789267511809 4.31053836803668e-07 6.365468484905162 0.21364380810945938 S(ph)SPGAVAGLSNAPGTPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSPGAVAGLSNAPGTPR 17 0 V9GYB2;U3KPY3;Q9BWG4-2;Q9BWG4 V9GYB2 SSBP4 Single-stranded DNA-binding protein 4 1 S(0.614)S(0.386)PGAVAGLSNAPGTPR 184.92 3.5227e-12 601300000.0 675390.0 662270.0 616110.0 451700.0 499310.0 604130.0 454360.0 556510.0 781250.0 611680.0 True False 637924.7703434139 630453.5551124632 655825.4364108546 494629.43219144305 538602.8563147194 600359.4005793545 500291.1429262755 554579.5967004106 639394.6937098191 606260.9910798396 1.0522279673761896 1.0399045368060595 1.0817543039388586 0.8158688081026548 0.8884009762122231 0.9902655942121997 0.8252075430998516 0.9147538846473086 1.0546525392817432 1.0 19.209579471894276 -5.23835714435478 24.912898028305275 0.9202531620074028 1.0561565145365648 0.41048850051073815 0.07157784271181042 734.5786216844757 792837.4901665731 0.019400887574968703 0.033573727856213084 5.776208424965022e-06 5.23835714435478 0.13590335252916197 S(ph)SPGGQDEGGFMAQGK ddPTM_KYSE-520_SHP099_60min_R1 4 SSPGGQDEGGFMAQGK 16 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 S(0.5)S(0.5)PGGQDEGGFMAQGK;S(0.637)S(0.363)PGGQDEGGFMAQGK;S(0.5)S(0.5)PGGQDEGGFMAQGK;S(0.5)S(0.5)PGGQDEGGFMAQGK 255.2 4.2812e-24 13417000000.0 17971800.0 16314680.0 14977550.0 14828110.0 15559190.0 16608190.0 15650060.0 16782330.0 18782800.0 15940420.0 True False 16974868.428104885 15530898.283966068 15943026.837927297 16237369.116166174 16783609.733318847 16504532.125714712 17232120.794666756 16724116.01425525 15372316.995856402 15799200.28025912 1.07441314288007 0.983018001447308 1.009103407458407 1.0277336085456517 1.062307549470699 1.0446435156807838 1.0906957623796978 1.0585419336162096 0.9729807030210192 1.0 23.91334819850607 -3.9092505183788973 19.125231681853204 1.0322802819989427 3.3666644290889067 0.12263696662505219 0.03563649499617996 675.578506053649 143932.50958330926 0.008998825413533355 745.0874131606718 0.00012323937342938318 3.9092505183788973 2.3343841470899642 S(ph)SPGPDTLVVLEFNPASK ddPTM_KYSE-520_SHP099_60min_R1 6 SSPGPDTLVVLEFNPASK 18 0 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 S(0.5)S(0.5)PGPDTLVVLEFNPASK;S(0.5)S(0.5)PGPDTLVVLEFNPASK;S(0.5)S(0.5)PGPDTLVVLEFNPASK;S(0.5)S(0.5)PGPDTLVVLEFNPASK;S(0.5)S(0.5)PGPDTLVVLEFNPASK;S(0.5)S(0.5)PGPDTLVVLEFNPASK 281.92 1.0306e-37 1642687000.0 840178.0 871320.0 757460.0 647975.0 689393.0 802214.0 697951.0 824689.0 984585.0 796624.0 True False 793571.6514866801 829460.4793220169 806287.0835788514 709558.349179213 743644.3069903939 797207.084859825 768506.6984253388 821828.3463428605 805809.183368042 789566.5311240935 1.0050725558958087 1.050526392172585 1.021176875913108 0.8986682201042969 0.9418386895549881 1.009676896669941 0.9733273487811445 1.0408601605400325 1.0205716068294133 1.0 19.590701311236362 -7.256105534900278 24.730660194896142 1.0230369126133072 0.9854903080614872 0.12927133712574457 0.041131011655471644 846.8193266532727 3926360.008181343 0.022305757755733478 0.012438590378495496 5.5449095357102026e-08 7.256105534900278 -0.03754660455182002 S(ph)SPGQTPEEGAQALAEFAALHGPALR ddPTM_KYSE-520_SHP099_60min_R1 10 SSPGQTPEEGAQALAEFAALHGPALR 26 0 Q14166 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 1 S(0.499)S(0.499)PGQT(0.001)PEEGAQALAEFAALHGPALR;S(0.479)S(0.479)PGQT(0.041)PEEGAQALAEFAALHGPALR;S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR;S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR;S(0.5)S(0.5)PGQT(0.001)PEEGAQALAEFAALHGPALR;S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR;S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR;S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR;S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR;S(0.5)S(0.5)PGQTPEEGAQALAEFAALHGPALR 365.5 2.1378999999999995e-86 81666060000.0 5322984.0 5079581.0 4860626.0 3980476.0 4582280.0 4837245.0 4083590.0 4751590.0 5680410.0 5089521.0 True False 5027707.466414473 4835550.30415348 5173949.7292365795 4358779.242266249 4942879.366393247 4807053.959670079 4496399.129197788 4735107.843319446 4648990.735483137 5044431.803527418 0.9966845944668635 0.9585916694863684 1.025675424062348 0.8640773454838436 0.979868409151025 0.952942600256515 0.8913588892318047 0.9386801185434461 0.921608402403664 1.0 22.266260345018885 -5.237161898253279 24.99955186734842 0.9336857092946691 0.9901446678398258 0.30542111281123385 0.04001218129017033 965.9052041025961 994632.173228328 0.010316096406627654 0.017856881687932976 5.7921273464344685e-06 5.237161898253279 0.0564589585451567 S(ph)SPKEELHPAAPSQLAPSFSSSSSSSSGPR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPKEELHPAAPSQLAPSFSSSSSSSSGPR 30 1 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 S(0.5)S(0.5)PKEELHPAAPS(0.001)QLAPSFSSSSSSSSGPR;S(0.5)S(0.5)PKEELHPAAPSQLAPSFSSSSSSSSGPR 158.37 1.8769e-08 1908210000.0 189041.0 211194.0 152301.0 287198.0 167484.0 215330.0 169960.0 183400.0 225877.0 153596.0 True False 178554.5188861092 201047.92323134292 162118.56615021607 314493.21157077275 180664.03794639534 213986.04559739187 187141.2154497526 182763.8282058818 184863.4306957992 152235.25893587977 1.1728854414818244 1.3206396772775395 1.0649212756848863 2.065836874907111 1.1867424091451084 1.4056273631558707 1.229289566410991 1.2005354704514306 1.2143272983406699 1.0 17.215943011995584 -7.696591216577362 0.844086135880822 1.0205368270138209 1.3757856078493096 0.15608232942380795 0.25863415165124404 1.0890642016803993 1.638515442624567 0.2450845581274702 0.09350168249048506 2.010984778802446e-08 7.696591216577362 0.3552487808354887 S(ph)SPKTPPRRPVPVADCEPPPVDR ddPTM_KYSE-520_SHP099_60min_R1 1 SSPKTPPRRPVPVADCEPPPVDR 23 3 B7Z3B9;Q13480;Q13480-2 B7Z3B9 GAB1 GRB2-associated-binding protein 1 1 S(0.333)S(0.333)PKT(0.333)PPRRPVPVADCEPPPVDR 82.726 0.003913300000000001 462890000.0 904220.0 814900.0 716200.0 627390.0 684780.0 698390.0 611990.0 712140.0 914590.0 672040.0 True False 854061.1140821178 775750.9808101637 762367.3979605171 687016.9569683184 738668.290134773 694031.0889553833 673855.9216468242 709669.7525547262 748523.5109376813 666086.2484392088 1.2822079964619848 1.1646404390241116 1.1445475713496815 1.0314234208830388 1.1089679330051332 1.041953786888193 1.0116646653880357 1.0654322232558373 1.1237636457615536 1.0 19.345349471762233 -4.063219366209911 0.8117448018144747 1.0529003165445026 1.4791293270014638 0.770978921427059 0.03917586895556693 1.5246905353849174 0.6264573720074648 0.014472524676685222 0.6297502539426144 8.645311257030485e-05 4.063219366209911 0.42622901045696127 S(ph)SPLKITLFLEEDK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPLKITLFLEEDK 14 1 Q9NQW6 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.5)S(0.5)PLKITLFLEEDK;S(0.696)S(0.304)PLKITLFLEEDK 278.82 9.8258e-26 434622000.0 533560.0 718800.0 823570.0 419923.0 435136.0 430883.0 294632.0 345407.0 807180.0 410270.0 True False 503962.3631745093 684267.7690592038 876658.6399585903 459832.355665546 469378.72761483275 428193.6993690667 324416.27789121895 344208.8637355998 660616.4593519265 406635.3269852299 1.2393472227581805 1.6827553428088118 2.1558841098683805 1.1308224474118265 1.154298941744139 1.0530164768114696 0.7978064284193455 0.8464804725343068 1.6245919021588644 1.0 18.633376031115926 -5.40704623010337 7.998516790777808 1.0640601672885406 1.6904224553605762 0.4713736566219472 0.29415988250379255 0.24602052719474815 15.507047805653364 0.08414942525693916 0.1249404921895256 3.917001788952698e-06 5.40704623010337 0.6263622880720356 S(ph)SPLKLEFDFTEDTGNIEAR ddPTM_KYSE-520_SHP099_60min_R1 6 SSPLKLEFDFTEDTGNIEAR 20 1 O75410;O75410-9;O75410-2;O75410-7;O75410-3;E7EVI4;E5RFM9;E7ET87;R4GMT7;H0YAY0 O75410 TACC1 Transforming acidic coiled-coil-containing protein 1 1 S(0.5)S(0.5)PLKLEFDFTEDTGNIEAR;S(0.5)S(0.5)PLKLEFDFTEDTGNIEAR;S(0.5)S(0.5)PLKLEFDFTEDTGNIEAR;S(0.5)S(0.5)PLKLEFDFTEDTGNIEAR;S(0.5)S(0.5)PLKLEFDFTEDTGNIEAR;S(0.5)S(0.5)PLKLEFDFTEDTGNIEAR 185.17 4.961e-13 697584000.0 430540.0 474799.0 455781.0 366400.0 356144.0 411414.0 417520.0 484735.0 544519.0 488732.0 True False 406657.0879397883 451988.9433521715 485161.3725353843 401222.5458378232 384170.50661783206 408846.21261972515 459726.99620252236 483053.56742299994 445648.07580694713 484402.21470774175 0.8395029493932846 0.9330860380662661 1.0015672055258884 0.8282838799155697 0.7930816477575701 0.844022178689661 0.9490604754561106 0.9972158523561757 0.9199959502163374 1.0 18.885845935547856 -6.888544460497594 5.619055865761954 0.9695986072285202 0.8764128747033421 0.37841131575419407 0.05895523366108294 0.2660212544812247 12.083310595035364 0.02788586544668492 0.018645644469296615 1.2925743679227115e-07 6.888544460497594 -0.09318573252517814 S(ph)SPLLNYNTGVYR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPLLNYNTGVYR 13 0 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 S(0.971)S(0.029)PLLNYNTGVYR;S(0.905)S(0.095)PLLNYNTGVYR 204.18 4.9822e-09 339550000.0 525810.0 479900.0 498690.0 490630.0 466040.0 409930.0 420750.0 447830.0 547170.0 376280.0 True False 496642.27112375165 456844.88365541387 530836.3553322123 537259.3276867118 502714.6965951251 407371.4748141875 463283.51612428523 446276.5822543081 447817.721033219 372946.45194140996 1.33167179507522 1.2249610668696866 1.423358105617819 1.4405803430759423 1.3479540936190533 1.092305537949415 1.2422252945767862 1.1966237510269124 1.2007560836202065 1.0 18.508608976058387 -6.244753457306663 23.172575810093253 1.1646613279714524 1.3552487023501985 0.6011001612296551 0.0837816469168926 245.16141232565465 340467.42011959513 0.028188407222906258 0.028091761235351922 5.691759521002155e-07 6.244753457306663 0.19058737437874607 S(ph)SPLLR ddPTM_KYSE-520_SHP099_60min_R1 5 SSPLLR 6 0 P56524-2;P56524;Q9UQL6-2;Q9UQL6;Q9UQL6-3;Q9UKV0-10;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UKV0-5;Q9UKV0-7 P56524-2;Q9UKV0-10 HDAC4;HDAC5;HDAC9 Histone deacetylase 4;Histone deacetylase 5;Histone deacetylase 9 1 S(0.996)S(0.004)PLLR;S(0.967)S(0.033)PLLR;S(0.96)S(0.04)PLLR;S(0.874)S(0.126)PLLR;S(0.868)S(0.132)PLLR 121.31 0.008067699999999999 3294270000.0 2497240.0 2180200.0 2097480.0 1929290.0 2393450.0 2369790.0 2028830.0 2268520.0 2444460.0 2340360.0 True False 2358713.119075476 2075459.919453084 2232686.9168866593 2112649.141537813 2581800.8981323526 2354999.2615810307 2233923.935872686 2260651.0335965506 2000607.6838219594 2319626.2311725295 1.0168505112494735 0.8947389418009711 0.962520119354779 0.9107713618456137 1.113024531037183 1.015249452663165 0.9630534031094645 0.9745755601555824 0.8624698483473728 1.0 21.14546092731677 -3.880491498505266 19.57070812965367 0.9688233238846201 11.497981979645502 0.04831948139119546 0.06648086722334408 1862.9203568163732 307038.1849089617 0.01648880187483411 5669.323373474718 0.0001316765688704201 3.880491498505266 10.529158655760881 S(ph)SPLPAK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPLPAK 7 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 S(0.925)S(0.075)PLPAK 114.99 0.0027751 2125500000.0 5394800.0 4932600.0 4500800.0 4588400.0 4878600.0 5024200.0 4852100.0 5115700.0 5309700.0 4666900.0 True False 5095539.689732823 4695630.492016455 4790928.769534614 5024480.156447231 5262518.064563082 4992842.104167635 5342597.619932599 5097954.830713351 4345592.326644521 4625554.896793263 1.1016061431387147 1.0151496624268308 1.03575222355614 1.0862437628684354 1.1377052444478397 1.0794039235441784 1.1550176658018776 1.1021282731392048 0.9394748140719656 1.0 22.141195015781623 -7.756595869332277 24.987366311298263 0.9697373866346052 1.0882764482962153 0.5687487890735012 0.041578821620524155 85.00857389698754 438571.3933486933 0.032864966388934234 0.011527357373645481 1.7514757579947753e-08 7.756595869332277 0.1185390616616101 S(ph)SPNPFITGLTR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPNPFITGLTR 12 0 A0A0D9SGJ6;J3KQV8;O43426 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 S(0.602)S(0.398)PNPFITGLTR;S(0.992)S(0.008)PNPFITGLTR 172.57 1.8219999999999999e-06 868970000.0 537820.0 482860.0 436380.0 423730.0 409060.0 473840.0 387700.0 401500.0 523830.0 383860.0 True False 507986.05248241057 459662.6808123635 464509.7530326864 464001.17180092965 441250.69476697757 470882.5887979761 426892.49958736845 400107.2902108043 428715.6766796989 380459.29903856124 1.3351915796673008 1.2081783307017413 1.2209183852425862 1.2195816292924964 1.159784228909739 1.2376687598066831 1.1220451193232657 1.0516428201962589 1.1268371617229067 1.0 18.537382599082967 -1.0000001004188583 0.08764767049191383 0.8527694642321043 2.083525418792434 0.7991110536927095 0.04144841753753532 71.70207870321435 0.4543829336994734 0.8628932154164107 10.62183676393814 0.09999997687770605 1.0000001004188583 1.2307559545603297 S(ph)SPNVANQPPS(ph)PGGK ddPTM_KYSE-520_SHP099_60min_R1 4 SSPNVANQPPSPGGK 15 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 2 S(0.596)S(0.404)PNVANQPPS(1)PGGK;S(0.938)S(0.062)PNVANQPPS(1)PGGK;S(0.976)S(0.024)PNVANQPPS(1)PGGK;S(0.979)S(0.021)PNVANQPPS(1)PGGK 215.89 3.8553e-14 291960000.0 1881980.0 1819610.0 1676930.0 1741740.0 1794400.0 1785980.0 1728720.0 1995720.0 2185790.0 1877940.0 True False 1777582.817765881 1732193.204309709 1785027.5909828646 1907274.4459267752 1935609.0712606062 1774833.0363443568 1903475.8882813426 1988797.31312455 1788905.6352819018 1861302.9126152135 0.9550207038940792 0.9306347680270377 0.9590204683421578 1.0246985770021546 1.039921582963081 0.9535433616501665 1.022657771274249 1.068497394833064 0.9611039789157207 1.0 20.82788143125849 -5.145700277092739 4.415720134504705 1.0122130293374583 0.9433893886892841 0.4302750957886743 0.03279114901855391 0.20606863262233857 6.519930541056827 0.008997463950709094 0.016254504815515824 7.1498959697532165e-06 5.145700277092739 -0.06882364064817414 S(ph)SPNVANQPPSPGGK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPNVANQPPSPGGK 15 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(0.998)S(0.002)PNVANQPPSPGGK 247.79 6.483600000000001e-18 0.0 444080.0 413080.0 333250.0 237090.0 239090.0 232960.0 182400.0 187190.0 215590.0 185600.0 True False 419445.99714846787 393235.01675427903 354731.82821885287 259622.96231629243 257905.02276398678 231506.01022787558 200838.77205245305 186540.68158047463 176444.29058163185 183955.72839461494 2.2801464287575106 2.137661165466541 1.9283543454428091 1.4113339366054367 1.4019950616092725 1.2584876385651744 1.091777754382409 1.014052039631593 0.9591671437549918 1.0 17.48899907707456 -5.085901345125656 0.572107275512486 0.9713164746675998 2.6396755984657116 0.9796884101224556 0.06674202858037334 0.22730346324109862 0.10591870419088505 0.04399215458037394 0.22595253439835916 8.205379175739259e-06 5.085901345125656 1.668359123798112 up S(ph)SPPAPPLPPGSGSPGTPQALPR ddPTM_KYSE-520_SHP099_60min_R1 5 SSPPAPPLPPGSGSPGTPQALPR 23 0 Q9Y3L3;A0A2R8Y5V0 Q9Y3L3 SH3BP1 SH3 domain-binding protein 1 1 S(0.5)S(0.5)PPAPPLPPGSGSPGTPQALPR;S(0.407)S(0.407)PPAPPLPPGS(0.18)GS(0.006)PGTPQALPR;S(0.308)S(0.308)PPAPPLPPGS(0.249)GS(0.054)PGT(0.082)PQALPR;S(0.5)S(0.5)PPAPPLPPGSGSPGTPQALPR;S(0.5)S(0.5)PPAPPLPPGSGSPGTPQALPR 260.69 2.459e-37 3827850000.0 782365.0 1040600.0 724359.0 579567.0 676704.0 943010.0 639060.0 865477.0 1080160.0 838357.0 True False 738965.653844039 990608.0140275552 771052.3401553773 634648.873426827 729956.7548809284 937124.324798202 703662.4214245649 862474.8622908507 884030.1726177257 830929.8092118768 0.8893237980533345 1.1921681025827326 0.9279391972791392 0.7637815690217937 0.8784818486332562 1.1278020290150006 0.8468373785891459 1.0379635592913605 1.063904752022573 1.0 19.664367088401345 -7.431369155475133 24.99999992612792 1.0383109699362238 0.9519274200277856 0.09679260085753705 0.12128558167433348 154.36407870722033 42163.203217654176 0.06886244057271586 0.03308043907412422 3.7036577263439387e-08 7.431369155475133 -0.08638354990843822 S(ph)SPPFWALPPSAPSER ddPTM_KYSE-520_SHP099_60min_R1 2 SSPPFWALPPSAPSER 16 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 S(0.626)S(0.374)PPFWALPPSAPSER;S(0.5)S(0.5)PPFWALPPSAPSER 109.84 0.00023501 274660000.0 164008.0 187487.0 140615.0 149996.0 144766.0 135714.0 134862.0 141954.0 177070.0 152268.0 True False 154910.14929815772 178479.84309627558 149679.26789195478 164251.57474205818 156158.26059413355 134866.95858544763 148495.16708628245 141461.59470631272 144918.55157145325 150919.02398271122 1.0264454752629708 1.1826199135552429 0.9917852895013523 1.0883424130868635 1.034715547935312 0.8936378928669558 0.9839393548111838 0.9373344126749593 0.9602404504554352 1.0 17.203415149589762 -6.056593179488332 5.505086135344938 0.953214498184069 1.073275802906409 0.5264690434889387 0.05295685615963881 0.1592400462708325 10.378577445241403 0.016658917762710054 0.016970621338078848 8.778227267758688e-07 6.056593179488332 0.12006130472233989 S(ph)SPPLRTPDVLESSGPAVR ddPTM_KYSE-520_SHP099_60min_R1 5 SSPPLRTPDVLESSGPAVR 19 1 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 S(0.549)S(0.45)PPLRT(0.002)PDVLESSGPAVR;S(0.589)S(0.407)PPLRT(0.003)PDVLESSGPAVR;S(0.587)S(0.413)PPLRTPDVLESSGPAVR;S(0.976)S(0.024)PPLRTPDVLESSGPAVR;S(0.492)S(0.492)PPLRT(0.016)PDVLESS(0.001)GPAVR 208.69 1.2097e-18 5311910000.0 1534100.0 1707560.0 1626670.0 1225733.0 1276352.0 1300531.0 1085242.0 1097955.0 1878420.0 1218056.0 True False 1449000.4148474701 1625526.254500184 1731527.750964023 1342226.2957899359 1376793.640950524 1292413.9036215197 1194948.852301251 1094146.4503696242 1537346.2791147532 1207264.971473228 1.20023395781893 1.3464535896511194 1.4342565980780806 1.1117909717466699 1.1404237458081965 1.0705304420821424 0.989798329726284 0.9063018278700118 1.2734124781560807 1.0 20.20331092402236 -5.406981888676653 4.749229493921145 1.0606165487623358 1.3276926788599974 0.5530109026604644 0.10623751060584155 0.16811818740418866 5.833761597040099 0.03071991938834855 0.04608983700130902 3.917582142063248e-06 5.406981888676653 0.2670761300976616 S(ph)SPPPGYIPDELHQVAR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPPPGYIPDELHQVAR 17 0 Q9Y2U5 Q9Y2U5 MAP3K2 Mitogen-activated protein kinase kinase kinase 2 1 S(0.5)S(0.5)PPPGYIPDELHQVAR;S(0.5)S(0.5)PPPGYIPDELHQVAR 132.6 1.661e-05 452720000.0 162685.0 174547.0 136013.0 138282.0 175833.0 172260.0 170125.0 155642.0 217646.0 170283.0 True False 153660.53874549264 166161.50011961142 144780.61560849467 151424.27970400077 189670.05674708317 171184.8614433975 187322.89525999778 155102.11422911592 178126.97280917427 168774.42509816925 0.9104491907237399 0.9845182409773401 0.8578350394278141 0.8971992031134066 1.1238080451867027 1.0142820000354094 1.1099009530089623 0.91899062395798 1.0554144841883777 1.0 17.36473677907763 -5.737938754490626 24.999994695334273 1.0355181104955975 0.9137398270350643 0.49855965963722093 0.06118359408172661 203.36041642362372 216334.0325523648 0.017842813515185553 0.02302183972878903 1.828358038492864e-06 5.737938754490626 -0.12177828346053321 S(ph)SPPSAGNSPSSLK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPPSAGNSPSSLK 14 0 P57682;P57682-2 P57682 KLF3 Krueppel-like factor 3 1 S(0.499)S(0.499)PPS(0.002)AGNSPSSLK 58.626000000000005 0.043851999999999995 421380000.0 434180.0 490690.0 390630.0 407210.0 380480.0 414050.0 408140.0 483260.0 551550.0 458560.0 True False 410095.16988362774 467116.51585929404 415810.63483009837 445911.1159678489 410421.61136493244 411465.7603659506 449398.774262545 481583.68385373236 451402.4234440333 454497.51515428105 0.902304536790304 1.027764729804363 0.9148798859526212 0.9811079293062418 0.903022783800288 0.9053201538984803 0.9887815868696108 1.059595856514764 0.9931900800179356 1.0 18.79391288132177 -6.978041080339371 7.648052524192522 1.020746204008276 0.9425146677371962 0.43132207136267053 0.04096592230942969 0.16031875159586445 41.152545079421245 0.0170816047765294 0.01129290758796271 1.0518623724277993e-07 6.978041080339371 -0.07823153627107982 S(ph)SPPSPYMGFSGNSK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPPSPYMGFSGNSK 15 0 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 S(0.5)S(0.5)PPSPYMGFSGNSK 84.566 0.00443 0.0 168770.0 223040.0 151170.0 150260.0 183780.0 143160.0 164300.0 186640.0 284870.0 141840.0 True False 159407.99166534594 212324.82361013477 160914.6600805521 164540.66522268386 198242.4404348387 142266.48533749423 180909.04741347625 185992.58940210353 233144.78898830907 140583.4079498502 1.1339033104262983 1.5103121108422455 1.1446205667311367 1.1704131207388275 1.4101410922230382 1.0119720912459629 1.2868449417445569 1.3230052686477196 1.6584089999545177 1.0 17.101066807958315 -7.259769292555975 3.984871572683447 1.3718529149196095 1.2391755209663062 0.029653066426362895 0.2006067742760858 0.6029581718331495 22.696601299022984 0.1057123873116474 0.05218358532438569 5.4983288044933605e-08 7.259769292555975 -0.13267739395330325 S(ph)SPQKEVK ddPTM_KYSE-520_SHP099_60min_R1 3 SSPQKEVK 8 1 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 1 S(0.928)S(0.072)PQKEVK;S(0.987)S(0.013)PQKEVK;S(0.899)S(0.101)PQKEVK 166.87 0.00025374 3852200000.0 5519800.0 5488200.0 5524000.0 3614900.0 4333500.0 4186800.0 3317730.0 2620600.0 6779600.0 3655360.0 True False 5213605.690551499 5224538.634043853 5880085.878712499 3958459.0091406875 4674521.795757826 4160668.628185396 3653118.5263244794 2611509.750252635 5548595.539808121 3622976.3542270456 1.4390393921474574 1.4420570611641481 1.6229986905247145 1.0925986322053203 1.2902435287229816 1.1484117535934253 1.0083197264211416 0.7208188778835669 1.5315020020305659 1.0 21.788743959230555 -5.5789834635464155 1.2077555195803746 1.0638758262077184 1.4999190182940907 0.3805377633291904 0.2118473556960555 0.481195877911227 1.4480173582830267 0.08031057325890771 0.1430509892106258 2.6364317702497914e-06 5.5789834635464155 0.4360431920863723 S(ph)SPQLAK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPQLAK 7 0 Q13370-2;Q13370 Q13370-2 PDE3B cGMP-inhibited 3,5-cyclic phosphodiesterase B 1 S(0.637)S(0.363)PQLAK 69.905 0.028457999999999997 2848500000.0 5646300.0 3502900.0 3358800.0 4025300.0 2902300.0 3701500.0 3052400.0 4311400.0 4784000.0 3266500.0 True False 5333088.483380008 3334615.4260399095 3575313.622270011 4407863.30174943 3130694.4981718985 3678397.5654982873 3360966.3805532195 4296444.7596883215 3915346.1948259547 3237561.3512985473 1.647254802211229 1.0299775245038785 1.104323048839212 1.361476377885932 0.9669915589139999 1.1361630456895977 1.0381166612349062 1.327062036358035 1.209350424589037 1.0 21.626476101235497 -4.253763755015975 24.714277249334135 1.1392035848492612 1.6472550909716903 0.5967148739722065 0.12728943837180595 567.0709312968489 1825826.9184453075 0.03128487985521611 0.3229878511051389 5.5748892604476696e-05 4.253763755015975 0.5080515061224291 S(ph)SPQLDPLRK ddPTM_KYSE-520_SHP099_60min_R1 10 SSPQLDPLRK 10 1 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.834)S(0.166)PQLDPLRK;S(0.851)S(0.149)PQLDPLRK;S(0.5)S(0.5)PQLDPLRK;S(0.973)S(0.027)PQLDPLRK;S(0.876)S(0.124)PQLDPLRK;S(0.607)S(0.393)PQLDPLRK;S(0.5)S(0.5)PQLDPLRK;S(0.5)S(0.5)PQLDPLRK;S(0.777)S(0.223)PQLDPLRK;S(0.63)S(0.37)PQLDPLRK 141.73 0.00015015 168151100000.0 44015610.0 38306100.0 36324978.0 38030730.0 38852450.0 35425570.0 38058070.0 39785800.0 43040040.0 37104500.0 True False 41573976.370356806 36465817.45737171 38666544.203899756 41645159.14484409 41909916.77479891 35204465.877182074 41905351.126569636 39647792.34587557 35225053.68711476 36775782.9968642 1.1304715490055437 0.9915714768188915 1.0514132141577184 1.1324071372836602 1.1396063757057868 0.9572730478691341 1.1394822274795027 1.078095124426209 0.9578328676270015 1.0 25.132252722582667 -7.754615864350371 24.95469281531908 0.9789164241407058 1.0757571418902911 0.2959992906667115 0.06078925610761974 176.34353238560462 644935.1514401527 0.04275995527169577 0.015367308783503836 1.759479194078731e-08 7.754615864350371 0.09684071774958536 S(ph)SPQSTDTAMDLLK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPQSTDTAMDLLK 14 0 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 S(0.5)S(0.5)PQSTDTAMDLLK 162.37 3.8868e-08 183920000.0 318990.0 297290.0 280060.0 244430.0 284600.0 337730.0 304950.0 336780.0 386930.0 350270.0 True False 301294.9888092001 283007.74215861264 298113.1157118434 267660.55370944086 306996.4008475083 335622.1017954178 335777.3220251948 335611.7887850431 316673.2657115397 347166.88030593685 0.8678678926506104 0.8151922266006921 0.85870263732858 0.770985277954994 0.884290576845842 0.9667457376684511 0.9671928431919972 0.966716031463857 0.912164390314177 1.0 18.405269795786342 -6.078401220193013 3.784818500037715 0.9601767660869015 0.8289247695636845 0.796237048331863 0.032040271475494965 0.10137475182394629 2.752684494571214 0.010443414240829894 0.010724138575989488 8.348314081794989e-07 6.078401220193013 -0.13125199652321695 S(ph)SPRPTAEK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPRPTAEK 9 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.794)S(0.206)PRPTAEK;S(0.863)S(0.136)PRPT(0.001)AEK 79.283 0.018716 2059180000.0 3127000.0 2872100.0 2636500.0 2799800.0 2982000.0 2803500.0 2770400.0 2837100.0 3283700.0 2851900.0 True False 2953539.0764800445 2734120.004890007 2806453.008549151 3065892.150209436 3216666.434740933 2786002.316594474 3050459.0684984424 2827258.762284116 2687462.855340714 2826634.384744624 1.0448960404714265 0.9672704823963374 0.9928602806558952 1.0846440440815723 1.137984612407362 0.9856252834220648 1.0791841650840315 1.000220890803162 0.9507642268292567 1.0 21.43065385701126 -7.502812292080372 10.298017203732334 0.9753725854588406 1.0402004073840396 0.2316838259172357 0.04982892158997623 0.7136245987095778 365.4004977271195 0.03053694610025525 0.013807581799597532 3.141866357376417e-08 7.502812292080372 0.06482782192519898 S(ph)SPRPTAEKK ddPTM_KYSE-520_SHP099_60min_R1 3 SSPRPTAEKK 10 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.693)S(0.307)PRPTAEKK;S(0.5)S(0.5)PRPTAEKK;S(0.59)S(0.41)PRPTAEKK 115.57 0.00044947 4347600000.0 4124220.0 3557060.0 3049440.0 2882690.0 3705450.0 3780870.0 3020260.0 2947780.0 4133060.0 4202350.0 True False 3895441.2951712594 3386173.4983440856 3246011.781676516 3156659.990887651 3997047.8338735015 3757272.1878874823 3325577.355697051 2937554.8391970242 3382600.4899639115 4165120.4483788223 0.9352529761024008 0.8129833315293622 0.7793320317879286 0.7578796411797187 0.959647598049478 0.9020800801450807 0.7984348584664475 0.7052748835487819 0.8121254911800957 1.0 21.98992678586727 -9.944048922727967 4.8794673751262465 1.000000748995818 0.8266077980262571 0.3108004660563741 0.07620284775155071 108624968.04652713 66.80430131258632 1489.6420533999813 0.01973931454710528 1.137499140756225e-10 9.944048922727967 -0.17339295096956098 S(ph)SPSARPPDVPGQQPQAAK ddPTM_KYSE-520_SHP099_60min_R1 5 SSPSARPPDVPGQQPQAAK 19 1 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 S(0.778)S(0.218)PS(0.004)ARPPDVPGQQPQAAK;S(0.661)S(0.337)PS(0.001)ARPPDVPGQQPQAAK;S(0.804)S(0.188)PS(0.008)ARPPDVPGQQPQAAK;S(0.5)S(0.5)PSARPPDVPGQQPQAAK;S(0.602)S(0.397)PS(0.002)ARPPDVPGQQPQAAK 222.54 4.991200000000001e-19 12862950000.0 8672120.0 7216710.0 7123040.0 7177960.0 7468210.0 7229520.0 7213880.0 7776970.0 8450670.0 7520360.0 True False 8191060.216157374 6870008.41909744 7582202.555666959 7860151.160267636 8055915.63869771 7184397.884025719 7943129.391084145 7749993.506228436 6916241.352054744 7453735.461151552 1.0989201667873398 0.9216866435498732 1.0172352634709092 1.0545251037193766 1.0807890460675305 0.9638654231117263 1.0656575394288255 1.0397462516104796 0.9278892963268958 1.0 22.829532186934376 -7.747675062564982 24.99451540880851 0.9639446379288262 1.0277011837435648 0.1985576703080557 0.053121898745427956 332.0664125047688 603003.9535247771 0.03543131698620512 0.013238119340281818 1.787824718037863e-08 7.747675062564982 0.06375654581473855 S(ph)SPSDTRPK ddPTM_KYSE-520_SHP099_60min_R1 3 SSPSDTRPK 9 1 Q5JRC6;A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q8IWS0-4;Q8IWS0-2 Q5JRC6 PHF6 PHD finger protein 6 1 S(0.617)S(0.379)PS(0.004)DTRPK;S(0.923)S(0.076)PS(0.001)DTRPK;S(0.5)S(0.5)PSDTRPK 110.38 0.0014723 14861600000.0 1555010.0 1132190.0 1121590.0 1331260.0 1254110.0 1282710.0 1475020.0 1276010.0 1355450.0 1363950.0 True False 1468750.4954644183 1077797.8929481637 1193889.4860074492 1457782.5501420873 1352801.3220901913 1274704.131092885 1624129.416407947 1271583.8191329718 1109334.4481138876 1351866.464137044 1.0864612255930075 0.797266535963794 0.8831415806808711 1.078348038667158 1.00069153128504 0.9429216308776361 1.2013978151641629 0.9406134798562962 0.8205946944782188 1.0 20.36652122017363 -3.9258335644287947 20.258314817253773 0.9684049065894004 4.841278492534135 0.09513636894271726 0.11324383426998574 1136.0320683256 315455.2042002329 0.028316112972385343 3303.011561252573 0.00011862232598595358 3.9258335644287947 3.8728735859447347 S(ph)SPSIICMPK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPSIICMPK 10 0 F8VUB4;F8VV52;F8VP97;Q9NZN8-4;Q9NZN8;F8VQD8;A0A087X050;F8VVY1;F8VX63;Q9NZN8-5 F8VUB4 CNOT2 CCR4-NOT transcription complex subunit 2 1 S(0.5)S(0.5)PSIICMPK;S(0.615)S(0.385)PSIICMPK 155.15 0.00011273 2121100000.0 4740900.0 4357400.0 3706700.0 4110800.0 4247500.0 4475200.0 4110900.0 4058400.0 4699500.0 4069900.0 True False 4477912.826250152 4148063.963409255 3945639.8129296945 4501489.196042912 4581754.08503089 4447268.616808845 4526469.8905177 4044322.3576376783 3846189.2647543005 4033843.8523342833 1.1100858114919092 1.0283154517765667 0.9781339975880456 1.1159304526470488 1.1358283197748333 1.1024890351755492 1.1221232294101684 1.002597647724349 0.9534799574675178 1.0 21.943723808499882 -7.417839867403367 5.17438804259859 0.9770064142147814 1.0819889180679174 0.4925404056606457 0.0465704923207071 0.2110073704990091 8.348629889313608 0.029903451548489255 0.0136886339530266 3.820851268894261e-08 7.417839867403367 0.10498250385313601 S(ph)SPSILAVQR ddPTM_KYSE-520_SHP099_60min_R1 4 SSPSILAVQR 10 0 O14646-2;O14646 O14646-2 CHD1 Chromodomain-helicase-DNA-binding protein 1 1 S(0.597)S(0.403)PSILAVQR;S(0.749)S(0.251)PSILAVQR;S(0.751)S(0.249)PSILAVQR;S(0.754)S(0.246)PSILAVQR 243.69 1.0164e-13 3276200000.0 3925010.0 3344650.0 3464340.0 3251170.0 3437650.0 3619200.0 3613390.0 3552360.0 3907950.0 3472080.0 True False 3707281.870986545 3183967.993577998 3687656.899539982 3560160.219300095 3708173.497447072 3596611.230325925 3978666.7244880134 3540037.6922870586 3198364.7914026105 3441320.072437363 1.0772848188924231 0.9252170465279936 1.0715820737151447 1.0345333024424437 1.0775439132055817 1.045125461921528 1.1561455025222536 1.0286859745015746 0.9294005567861416 1.0 21.714530650717084 -3.8939081696931614 20.575358115661416 1.0359064572026482 7.382037334004566 0.03833765972415548 0.0651826606380016 3406.186076602493 641375.7792351784 0.015960079285748142 29599.484895091733 0.00012767087366269135 3.8939081696931614 6.346130876801918 S(ph)SPSVKPAVDPAAAK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPSVKPAVDPAAAK 15 1 Q6FI81-3;Q6FI81;H3BPG7;H3BV90;H3BT65 Q6FI81-3 CIAPIN1 Anamorsin 1 S(0.499)S(0.499)PS(0.002)VKPAVDPAAAK;S(0.573)S(0.427)PSVKPAVDPAAAK 148.44 4.2703e-06 2884800000.0 2368780.0 1930200.0 2014670.0 2025330.0 1941490.0 2061780.0 2132740.0 2135470.0 2343440.0 1996000.0 True False 2237379.0513541386 1837470.2947107344 2144538.851785972 2217816.754262329 2094274.2174329888 2048911.6662415422 2348338.1727365595 2128062.552992443 1917930.3693149975 1978316.9928645038 1.1309507320737948 0.9288047877757799 1.0840218526762928 1.121062378911805 1.0586140770092587 1.0356842071476224 1.1870383670598126 1.0756934104433462 0.9694757595636534 1.0 20.915842182171613 -3.9510587965364095 17.245913887942272 1.0589132806631898 1.6339120453341467 0.09380271795719364 0.07080134570473401 9404522.851424232 74520771.46812697 0.017734270610833564 183613110.71311677 0.00011192863397156385 3.9510587965364095 0.5749987646709569 S(ph)SPSVLIHSLGK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPSVLIHSLGK 12 0 Q9P0K7-3;Q9P0K7;Q9P0K7-2;Q9P0K7-4 Q9P0K7-3 RAI14 Ankycorbin 1 S(0.5)S(0.5)PSVLIHSLGK;S(0.5)S(0.5)PSVLIHSLGK 270.79 5.3646e-22 830060000.0 918020.0 1151330.0 1009140.0 1636520.0 1036060.0 952820.0 970730.0 988510.0 1253000.0 900020.0 True False 867095.6005725006 1096018.3786184378 1074190.7790810892 1792054.3687623194 1117592.0276249794 946873.0969493669 1068860.861811831 985081.0895299684 1025486.7855595582 892046.5230049639 0.9720295726859479 1.2286560738181802 1.2041869469571507 2.0089247842428364 1.2528405176225998 1.0614615634167972 1.1982120150093147 1.1042934018862678 1.1495889049655001 1.0 19.76675942758497 -6.00205312386076 24.999934052807408 1.1198596924071778 1.370999958258586 0.17792328578529126 0.2528350694860397 153.25339273529232 1866134.8702978834 0.08335356907536869 0.093048674339416 9.95283664607846e-07 6.00205312386076 0.25114026585140814 S(ph)SPTPESR ddPTM_KYSE-520_SHP099_60min_R1 1 SSPTPESR 8 0 Q8NCA9;K7EQ92 Q8NCA9 ZNF784 Zinc finger protein 784 1 S(0.499)S(0.499)PT(0.002)PESR 93.14299999999999 0.030193 0.0 132410.0 115970.0 127630.0 111720.0 109170.0 132380.0 129810.0 97644.0 139180.0 122410.0 True False 125064.95334720898 110398.62712548123 135857.23401522017 122337.8352101572 117761.05790766841 131553.7673161322 142932.46162351378 97305.295754281 113908.420442282 121325.54263353882 1.0308212980754183 0.9099372212077212 1.1197743778123788 1.0083436064215758 0.9706204922022327 1.084303968155226 1.1780904376849828 0.8020182200889845 0.9388659466897249 1.0 16.888523787066966 -7.271687533071621 24.997867973110974 0.9028315760250204 1.0384097667540813 0.32773269470190125 0.084381774547165 830.0353237488968 2024656.6876565337 0.04548958260763543 0.022235561339787255 5.3494910705925287e-08 7.271687533071621 0.13557819072906085 S(ph)SPTQETQAPFIAK ddPTM_KYSE-520_SHP099_60min_R1 5 SSPTQETQAPFIAK 14 0 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 S(0.745)S(0.255)PTQETQAPFIAK;S(0.498)S(0.498)PT(0.004)QETQAPFIAK;S(0.96)S(0.04)PTQETQAPFIAK;S(0.753)S(0.247)PTQETQAPFIAK;S(0.5)S(0.5)PTQETQAPFIAK 268.59 7.484699999999999e-25 5340900000.0 9386500.0 8447530.0 8171190.0 7060500.0 7351070.0 8368230.0 7599450.0 8518160.0 10713660.0 8844860.0 True False 8865812.133476144 8041697.978798972 8697917.98176625 7731527.797183261 7929557.387133148 8316000.772532699 8367676.569484725 8488612.49111348 8768329.413390277 8766501.421596948 1.0113284316174906 0.9173212427693941 0.9921766464713349 0.8819399467769491 0.9045292991794965 0.9486111246210026 0.9545058133305394 0.9683010454091906 1.000208520104591 1.0 23.063569769035777 -7.465140511575895 1.5635325680947916 1.0020821619796638 0.9398236945230334 0.2731329849178372 0.03623440048287525 0.5311794552183288 2.2945245862316157 0.031959145405080575 0.010801727823682314 3.426569054429572e-08 7.465140511575895 -0.06225846745663044 S(ph)SPVESLKK ddPTM_KYSE-520_SHP099_60min_R1 3 SSPVESLKK 9 1 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2;B1AKL5 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.584)S(0.416)PVESLKK;S(0.539)S(0.461)PVESLKK;S(0.886)S(0.114)PVESLKK 167.2 6.6803e-05 23736400000.0 23810600.0 21425500.0 20038100.0 19569900.0 20053400.0 19764000.0 20383500.0 20648100.0 25442200.0 18953300.0 True False 22489778.552745692 20396186.819668826 21329787.98809358 21429817.412095 21631488.491761837 19640645.544916444 22444063.103789356 20576476.56040275 20822537.825669073 18785388.507444263 1.1971952852523362 1.0857474047761235 1.1354456672344586 1.1407705197900382 1.151506048607391 1.045527780121942 1.1947617210522548 1.0953447437218942 1.1084432891775184 1.0 24.163107617400016 -13.999999999943192 0.21915821005240355 0.35208442081143343 1.1432355786403274 0.4592374318669159 0.043422082654236895 136.29996606873902 1.3637792618043951 38.881176871044076 0.08006207957386308 1.000000000130805e-14 13.999999999943192 0.791151157828894 S(ph)SPVKKPSLLK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPVKKPSLLK 11 2 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 S(0.848)S(0.152)PVKKPSLLK 137.73 6.5605e-05 2036800000.0 3951300.0 3256500.0 2778600.0 3686200.0 3074400.0 3536400.0 3174700.0 3840800.0 3397300.0 2993100.0 True False 3732113.5122787347 3100052.851893846 2957713.0019171913 4036535.3397035566 3316337.789056845 3514328.015839024 3495629.658086199 3827477.1612494607 2780435.9589636754 2966583.4625965627 1.2580510743534337 1.0449909436158122 0.9970098732123291 1.3606680515135403 1.117898023389557 1.1846381738955143 1.178335179899701 1.2901970261437996 0.9372518906075348 1.0 21.500370941833964 -7.7770999014214794 24.99943360823434 0.9686257625461184 1.172630180463752 0.3932050652256469 0.1042843547014303 288.9017083798284 461170.51109599386 0.09912396936652634 0.025957546235401655 1.670706254999251e-08 7.7770999014214794 0.20400441791763357 S(ph)SPVKVGEK ddPTM_KYSE-520_SHP099_60min_R1 5 SSPVKVGEK 9 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 S(0.983)S(0.017)PVKVGEK;S(0.875)S(0.125)PVKVGEK;S(0.644)S(0.356)PVKVGEK;S(0.989)S(0.011)PVKVGEK;S(0.922)S(0.078)PVKVGEK 184.87 1.0059e-05 8402100000.0 14322770.0 13959540.0 14584880.0 11297920.0 12958540.0 11589520.0 10330160.0 10725190.0 17029700.0 11163190.0 True False 13528257.396365881 13288902.744703265 15525044.7014331 12371670.919956477 13978303.373993207 11517185.50676584 11374433.385446101 10687986.81916816 13937535.763801733 11064292.82143041 1.2226951703739277 1.2010620976122408 1.403166470012676 1.118161921383155 1.263370700648726 1.0409328180883124 1.0280307624735836 0.9659891501123883 1.2596860900866746 1.0 23.399407907883738 -6.262916849087081 24.8589671474209 1.0548710168882214 1.2415422021738447 0.46086963084135335 0.0987877199941912 111.97812035152427 1884059.4451123993 0.03293036098869641 0.030620727270539053 5.45862363015311e-07 6.262916849087081 0.18667118528562332 S(ph)SPVLQHK ddPTM_KYSE-520_SHP099_60min_R1 5 SSPVLQHK 8 0 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.5)S(0.5)PVLQHK;S(0.5)S(0.5)PVLQHK;S(0.777)S(0.223)PVLQHK;S(0.772)S(0.228)PVLQHK;S(0.5)S(0.5)PVLQHK 160.53 0.00014733 11949500000.0 9800580.0 9630030.0 9173690.0 9283180.0 9611740.0 9448020.0 9426990.0 9176640.0 10757460.0 8520640.0 True False 9256922.290428126 9167388.903830282 9765040.735822976 10165450.636110164 10368129.254680354 9389051.402614936 10379962.147756336 9144808.37768388 8804176.43749842 8445153.758557605 1.0961224099736424 1.0855206626097038 1.1562892772589142 1.2037022565526834 1.2277016560147491 1.111767964331125 1.2291028019754122 1.0828468775263334 1.0425122726246414 1.0 23.009692259335935 -7.593958523154287 2.9378171080506763 1.0176042937722576 1.1584372956355549 0.5547759923135327 0.04962436736644074 0.2128554335114302 3.512240897468665 0.04346005651871617 0.014041094397085771 2.54707349659173e-08 7.593958523154287 0.14083300186329728 S(ph)SPVNRPSSATNK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPVNRPSSATNK 13 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80 Q96L91-4 EP400 E1A-binding protein p400 1 S(0.953)S(0.047)PVNRPSSATNK 58.32 0.03707 494870000.0 832460.0 771650.0 709780.0 700680.0 752110.0 706750.0 733600.0 687490.0 851670.0 691200.0 True False 786281.7843321319 734578.775729736 755533.5544881542 767272.4165328768 811296.7780794785 702338.9110943995 807759.4472460501 685105.2576513714 697028.1968535586 685076.5057454628 1.1477284328653818 1.0722580172712353 1.1028455189337194 1.119980630043608 1.1842425937474963 1.0251977774805643 1.1790791838162518 1.0000419688978786 1.0174457757752042 1.0 19.385905584110457 -7.2820478811755365 24.650980808490477 1.0065578766400847 1.1153277306520086 0.5690033445717753 0.044970198715175824 511.8308277840157 612225.3646333585 0.023206393694307364 0.011169079889105378 5.22338597742787e-08 7.2820478811755365 0.10876985401192396 S(ph)SPVPPVPER ddPTM_KYSE-520_SHP099_60min_R1 1 SSPVPPVPER 10 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 S(0.662)S(0.338)PVPPVPER 98.943 0.0023088 916990000.0 448220.0 388590.0 297460.0 394210.0 394560.0 425520.0 431110.0 470170.0 506800.0 427500.0 True False 423356.3430955822 369921.5531145181 316634.7475528278 431675.59987644176 425609.627260692 422864.17184136994 474690.8060281416 468539.09000850335 414777.8953883345 423712.6825899674 0.9991590067774062 0.8730481014949848 0.7472864527381627 1.0187932002360671 1.0044769598566874 0.9979974383976168 1.1203129515183912 1.1057943490020927 0.9789130994450804 1.0 18.69272678660761 -5.419301710208281 8.068018749538217 1.0396001521906664 0.8733863239985096 0.5115029009164342 0.07130852066793772 0.2398065021112505 16.798498245191322 0.020879406733995857 0.030993088202300942 3.8080118378430085e-06 5.419301710208281 -0.1662138281921568 S(ph)SPVPPVPERR ddPTM_KYSE-520_SHP099_60min_R1 1 SSPVPPVPERR 11 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 S(0.693)S(0.307)PVPPVPERR 74.611 0.019049 6638300000.0 938060.0 852350.0 881540.0 772660.0 795350.0 775100.0 883420.0 1026900.0 1113100.0 771820.0 True False 886023.9418237507 811401.8265965665 938365.4789138697 846093.3740912997 857939.520077533 770262.3133912536 972724.7149483452 1023337.9235802627 910989.0989675525 764982.275266874 1.158228066806711 1.0606805580083518 1.2266499620354063 1.1060300368346823 1.1215155537796344 1.0069021705405365 1.2715650367310767 1.3377276267260676 1.1908630152897886 1.0 19.545066795208342 -6.784858342421254 24.999821984890115 1.2281828997023891 1.1161315479150238 0.13322606437983586 0.09821692729265909 352.29246323559653 376069.8199511714 0.039560266146898275 0.026689152316548826 1.6411249858054388e-07 6.784858342421254 -0.11205135178736536 S(ph)SPVRPSSEK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPVRPSSEK 10 1 B3KV94;A0A3B3ISE6;A0A3B3ITA8;A0A3B3ITJ7;A0A3B3ITE7;A0A3B3IT25;A0A3B3IS40;Q9UGL1;Q9UGL1-2 B3KV94 KDM5B Lysine-specific demethylase 5B 1 S(0.696)S(0.303)PVRPS(0.001)S(0.001)EK 93.61399999999999 0.0048786 478570000.0 646720.0 514830.0 471150.0 533930.0 574530.0 513450.0 548660.0 556240.0 579310.0 527670.0 True False 610845.1523956421 490096.79402441566 501521.0828666541 584674.5466680913 619742.2423714654 510245.3680953935 604123.907205586 554310.5332673917 474121.9072166858 522995.25432104757 1.1679745606652612 0.9370960634445131 0.9589400261723765 1.1179347075091834 1.1849863593428105 0.9756214112454884 1.155123114816519 1.0598767936948064 0.9065510696310063 1.0 18.99643832989841 -7.717608566781054 10.473648307237532 0.9534174193808189 1.0668234485294592 0.2219268317079004 0.08706446954755 0.6657978318458065 156.20089854595815 0.06023408554636342 0.022580113636641853 1.9159820375276756e-08 7.717608566781054 0.11340602914864029 S(ph)SPVTVNQTDKEK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPVTVNQTDKEK 13 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;H0YHA8;A0A2R8YFX5 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.836)S(0.163)PVTVNQTDKEK 99.069 0.0014582 826400000.0 1258700.0 1304400.0 1310400.0 1260500.0 1295600.0 1290800.0 1156900.0 1378700.0 1640700.0 1465600.0 True False 1188877.4018437576 1241734.6660556847 1394870.4807141302 1380297.5410168557 1397556.3490443851 1282743.6384020506 1273850.7422559378 1373917.6114909977 1342790.238681216 1452615.9242195464 0.818438915629065 0.8548265548739852 0.9602472735272806 0.9502150692437539 0.9620962607822551 0.8830576734116667 0.8769356861761965 0.9458230414410256 0.9243945466195155 1.0 20.470221870043932 S(ph)SPYGTLKPEEMSGPGLAEPK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPYGTLKPEEMSGPGLAEPK 21 1 Q5JSZ5;Q5JSZ5-5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 S(0.486)S(0.486)PY(0.027)GT(0.001)LKPEEMSGPGLAEPK;S(0.5)S(0.5)PYGTLKPEEMSGPGLAEPK 115.88 7.7193e-05 1303990000.0 1125980.0 950960.0 893890.0 916210.0 1011810.0 937620.0 906370.0 1001320.0 1179420.0 1046170.0 True False 1063519.644814519 905274.4541799391 951511.5796745692 1003286.3229314187 1091433.6905886056 931767.9657875211 997994.7249187599 997846.6546298437 965267.0587587006 1036901.7477079439 1.025670606849119 0.8730571205816124 0.9176487374795843 0.9675808967910107 1.052591234416572 0.8986077686214538 0.9624776186604108 0.9623348179666675 0.9309146800961704 1.0 19.983847766455053 -5.708231285571674 0.00435461679451872 1.9059584318870013 6.827580746124741e-08 0.020569725484788637 0.052846609302792114 88155.40846791268 107.41262835139996 23101.493387997216 23911.4277344465 1.957801759278904e-06 5.708231285571674 -1.9059583636111939 S(ph)SRGQEEISGALPVASPASSR ddPTM_KYSE-520_SHP099_60min_R1 6 SSRGQEEISGALPVASPASSR 21 1 H0Y9D5;H0Y8S9;Q9UBK8;Q9UBK8-1 H0Y9D5 MTRR Methionine synthase reductase 1 S(0.785)S(0.212)RGQEEIS(0.003)GALPVASPASSR;S(0.5)S(0.5)RGQEEISGALPVASPASSR;S(0.5)S(0.5)RGQEEISGALPVASPASSR;S(0.5)S(0.5)RGQEEISGALPVASPASSR;S(0.5)S(0.5)RGQEEISGALPVASPASSR;S(0.5)S(0.5)RGQEEISGALPVASPASSR 261.11 2.905e-35 4359540000.0 2666960.0 2631540.0 2676180.0 2270580.0 2490860.0 2542680.0 2326130.0 2465420.0 3300660.0 2548150.0 True False 2519018.4123470467 2505116.8683779323 2848690.844839397 2486375.2405252317 2686876.5109452726 2526810.1909607425 2561277.9212410776 2456868.033453352 2701343.346867523 2525575.3734307014 0.9974037753326886 0.9918994676349815 1.1279373701564805 0.9844787317306547 1.0638670851844196 1.0004889252338423 1.014136401623951 0.9727953714230201 1.069595219879762 1.0 21.268180667617557 -6.311980051599052 24.99699290540705 1.0098737179677066 1.0333931515122226 0.05404099973958876 0.04519076282200738 1177.2533559525987 582254.1332902083 0.015530047110311317 0.01369630925500932 4.875508842105207e-07 6.311980051599052 0.02351943354451591 S(ph)SRSS(ph)PELTR ddPTM_KYSE-520_SHP099_60min_R1 1 SSRSSPELTR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.83)S(0.17)RS(0.31)S(0.679)PELT(0.011)R 115.12 0.00197 610090000.0 521000.0 494700.0 487320.0 504800.0 507460.0 490980.0 525220.0 556330.0 661830.0 506800.0 True False 492099.0914122493 470933.8694401612 518733.42693956813 552776.0402263462 547394.2149475638 487915.6117002157 578314.363253231 554400.2210783984 541658.3553766013 502310.1462844332 0.9796718124296022 0.9375360480444981 1.032695498541324 1.100467598186513 1.0897534501276065 0.9713433330170748 1.1513093405160095 1.1037010205333762 1.0783344899226606 1.0 18.938218891087796 -4.93457863654745 4.186098919976864 1.0747327090304322 0.959729130176859 0.43877538199479726 0.04989215252568865 0.18217919123426174 6.372496445184195 0.013290372836541975 0.029249344309558965 1.1625760273933901e-05 4.93457863654745 -0.11500357885357315 S(ph)SS(ph)PFLSK ddPTM_KYSE-520_SHP099_60min_R1 9 SSSPFLSK 8 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 S(0.968)S(0.064)S(0.968)PFLSK;S(1)S(0.159)S(0.841)PFLSK;S(0.994)S(0.01)S(0.997)PFLSK;S(0.999)S(0.001)S(1)PFLSK;S(0.993)S(0.008)S(0.999)PFLSK;S(1)S(0.258)S(0.743)PFLSK;S(0.999)S(0.016)S(0.985)PFLSK;S(0.999)S(0.002)S(0.998)PFLSK;S(0.999)S(0.012)S(0.989)PFLSK 135.56 0.00075883 7664940000.0 22317180.0 19455200.0 16883960.0 20208220.0 20376870.0 19407460.0 18843120.0 21394310.0 22141060.0 20455840.0 True False 21079201.53720464 18520542.989149462 17972327.076891135 22128803.152977098 21980413.74046929 19286330.843308218 20747966.460729267 21320098.13207947 18120801.634701766 20274617.172002714 1.0396843184942097 0.9134842267071036 0.8864447069170401 1.0914535631052424 1.0841345882881634 0.9512549943453815 1.023346891569435 1.0515660025147338 0.8937678813351327 1.0 24.273171337753098 -5.252655818861303 24.97372337770551 1.0165364275487594 0.9432324051808839 0.17395809710403554 0.06668999279711985 1065.956453265604 3030755.853539663 0.018331781123156664 0.031114209954143768 5.589129613421144e-06 5.252655818861303 -0.07330402236787548 S(ph)SS(ph)PVTELASR ddPTM_KYSE-520_SHP099_60min_R1 4 SSSPVTELASR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.995)S(0.012)S(0.984)PVT(0.009)ELASR;S(0.997)S(0.204)S(0.795)PVT(0.004)ELASR;S(0.999)S(0.002)S(0.999)PVTELASR;S(0.999)S(0.02)S(0.981)PVTELASR 170.4 3.8489000000000005e-07 3427390000.0 3193250.0 3049030.0 2760270.0 2769070.0 2864450.0 2809720.0 2882330.0 3120510.0 3503370.0 2768770.0 True False 3016114.056913944 2902550.022112667 2938201.4207881507 3032241.5802487438 3089865.9185089436 2792183.4952672883 3173704.045229968 3109685.6791425063 2867246.3207707764 2744240.8518704614 1.0990704605458281 1.0576877828104274 1.07067913473611 1.104947322018759 1.125945602188272 1.0174702753820422 1.1564961738204527 1.1331679130944208 1.0448231316199796 1.0 21.387975676399886 -3.9676429482648006 15.767467863025654 1.0852680987699639 1.1437149960772544 0.0004513876960717811 0.048873574331640336 12525402.757386683 173279783.37726697 0.011760316332732172 19729596.67811241 0.0001077350584797161 3.9676429482648006 0.05844689730729047 S(ph)SSAPLIHGLSDLSQVFQPYTLR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSAPLIHGLSDLSQVFQPYTLR 23 0 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 S(0.363)S(0.363)S(0.275)APLIHGLSDLSQVFQPYTLR 196.22 2.09e-15 1040200000.0 93211.0 103680.0 91602.0 103490.0 81365.0 90781.0 75721.0 75333.0 90957.0 76948.0 True False 88040.40001847825 98699.05717314716 97506.81148838204 113325.65848459695 87767.96259647742 90214.40210549784 83375.6176457444 75071.68740585442 74441.50163937792 76266.30058463817 1.1543814154296566 1.2941372062961642 1.2785045392384249 1.4859204867139366 1.1508092292883019 1.1828868243763897 1.0932170173013245 0.9843362904765781 0.9760733255543824 1.0 16.21875810084077 -6.690137181107877 1.265958357479801 0.980333781072986 1.2920083507030002 0.6870410300988015 0.0855113301968366 0.263555742145815 0.8561934604388016 0.05418111404709506 0.03330715639712347 2.0410931203539363e-07 6.690137181107877 0.3116745696300143 S(ph)SSAPNVHINTIEPVNIDDLIR ddPTM_KYSE-520_SHP099_60min_R1 5 SSSAPNVHINTIEPVNIDDLIR 22 0 H7C560;A0A2U3TZI2;A0A2R8Y8E0;P15056;A0A2R8YDP5;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.362)S(0.362)S(0.277)APNVHINTIEPVNIDDLIR;S(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;S(0.364)S(0.364)S(0.272)APNVHINTIEPVNIDDLIR;S(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR;S(0.333)S(0.333)S(0.333)APNVHINTIEPVNIDDLIR 233.08 5.987299999999999e-27 3557580000.0 575318.0 702269.0 573834.0 587848.0 481594.0 596305.0 415664.0 466463.0 645657.0 453503.0 True False 543403.9636720007 668530.9431127403 610824.2578068621 643716.8971770543 519492.70790497144 592583.2393068906 457683.3736097081 464844.94872628275 528421.9644884493 449485.316239995 1.208947086898517 1.4873254341322901 1.3589415176373034 1.4321199690388833 1.155750119382314 1.31835950563175 1.0182387657027174 1.0341716001198284 1.1756156328059166 1.0 18.777914461069173 -6.383569297791455 1.1624325781394664 1.0565726717564008 1.3741457151630996 0.6025948872355162 0.10459448424098872 0.3103508603659016 0.862117647949838 0.055199226093613066 0.04450214004607761 4.1345733615202407e-07 6.383569297791455 0.3175730434066988 S(ph)SSDEQGLSYSSLK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSDEQGLSYSSLK 14 0 Q9NPH3 Q9NPH3 IL1RAP Interleukin-1 receptor accessory protein 1 S(0.333)S(0.333)S(0.333)DEQGLSYSSLK 110.44 0.00017141 269240000.0 255860.0 300530.0 233590.0 367400.0 369440.0 336620.0 316690.0 392140.0 465920.0 295140.0 True False 241666.93575573518 286092.0876952734 248647.58515721434 402317.58553716197 398512.82617394027 334519.0297171513 348704.1157965537 390779.75786616403 381320.67288739723 292525.2892154457 0.8261403190263895 0.9780080500478227 0.8500037238629468 1.3753258277811802 1.3623192279982141 1.1435559319138973 1.1920477601501736 1.3358836732175783 1.303547716883218 1.0 18.15820182750411 -5.254244951113915 24.996061625670574 1.257160293470164 0.8940464078629575 0.6751760750287699 0.11412635586038396 317.5849950149498 1103403.4414039012 0.030637119237540582 0.051674633067644346 5.568715731984616e-06 5.254244951113915 -0.3631138856072065 S(ph)SSDMDLQKK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSDMDLQKK 10 1 A0A0U1RQE4;A0A494C1M0;Q5HYK7-3;Q5HYK7-2;Q5HYK7 A0A0U1RQE4 SH3D19 SH3 domain-containing protein 19 1 S(0.333)S(0.333)S(0.333)DMDLQKK 47.711999999999996 0.057873 457940000.0 565680.0 664420.0 496010.0 578950.0 526850.0 583600.0 451150.0 465370.0 572730.0 469970.0 True False 534300.602744877 632500.2658852476 527983.59824406 633973.233932336 568310.0976335553 579957.5359245713 496756.64479969366 463755.74008817435 468736.66934838385 465806.4314311272 1.1470442799669183 1.3578607404409944 1.1334828431241317 1.3610229295987586 1.2200563566447538 1.2450612460260162 1.0664443667586903 0.9955975460951615 1.006290677241733 1.0 18.829371033542778 -6.849742229182018 2.9769456065953586 1.002798194944118 1.2505591927587763 0.7185846574054808 0.07034269633420082 0.12834128413389936 2.284526769146807 0.03027280394774363 0.01950593636709251 1.4133761899473838e-07 6.849742229182018 0.2477609978146582 S(ph)SSDPPAVHPPLPPLR ddPTM_KYSE-520_SHP099_60min_R1 6 SSSDPPAVHPPLPPLR 16 0 O43150 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 S(0.466)S(0.069)S(0.466)DPPAVHPPLPPLR;S(0.36)S(0.36)S(0.279)DPPAVHPPLPPLR;S(0.358)S(0.358)S(0.285)DPPAVHPPLPPLR;S(0.364)S(0.364)S(0.272)DPPAVHPPLPPLR;S(0.367)S(0.367)S(0.266)DPPAVHPPLPPLR;S(0.361)S(0.361)S(0.277)DPPAVHPPLPPLR 148.44 6.1647000000000005e-06 5670010000.0 4876160.0 4454540.0 4118650.0 4275430.0 4477160.0 4351010.0 4079980.0 4204060.0 5276540.0 4340140.0 True False 4605669.684416031 4240537.2119991435 4384144.769073 4681765.581745102 4829487.020444235 4323853.732664785 4492424.195167582 4189477.0970949787 4318453.346748949 4301689.736177827 1.0706652424701133 0.9857840690683983 1.0191680567293624 1.0883550113739684 1.1226953398864536 1.0051523930934758 1.044339427222203 0.9739142881135466 1.0038969827205662 1.0 22.036472041965293 -7.002630412187769 1.9702397364636304 0.9923555544493998 1.0507796508167082 0.2890938341490107 0.03887130057761348 0.49016844734437465 3.753342560288361 0.025009374266519894 0.012932413820460464 9.939615572303772e-08 7.002630412187769 0.05842409636730839 S(ph)SSEDAESLAPR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSEDAESLAPR 12 0 Q4G0J3;Q4G0J3-3;H0YA82 Q4G0J3 LARP7 La-related protein 7 1 S(0.854)S(0.012)S(0.134)EDAESLAPR;S(0.984)S(0.013)S(0.003)EDAESLAPR;S(0.758)S(0.121)S(0.121)EDAESLAPR 207.12 3.1146e-09 1587510000.0 2601210.0 2330050.0 2376070.0 2203910.0 2289600.0 2512720.0 2564450.0 2721870.0 3240700.0 2502940.0 True False 2456915.6959164212 2218110.9005236453 2529235.2740464183 2413368.943770296 2469778.4939580304 2497037.18243384 2823689.632620139 2712428.468259235 2652270.57139893 2480765.898857855 0.9903859517931884 0.8941234243605429 1.0195380689531723 0.9728321986695365 0.99557096261889 1.0065589758322122 1.1382330085721375 1.0933834867320764 1.0691337593039456 1.0 21.24235416892701 -6.581939590185933 5.646492079831622 1.0828046186911084 0.9749318456790016 0.5348243873484306 0.044128268846632755 0.14471035633796753 9.355823558893347 0.016831586202474883 0.013010825485411453 2.618547219499633e-07 6.581939590185933 -0.10787277301210685 S(ph)SSERRPATPAEVR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSERRPATPAEVR 14 2 Q15464;Q15464-2 Q15464 SHB SH2 domain-containing adapter protein B 1 S(0.354)S(0.354)S(0.293)ERRPATPAEVR 67.646 0.031096 0.0 97316.0 95089.0 97953.0 83034.0 98826.0 75319.0 62124.0 70059.0 102060.0 89425.0 True False 91917.68748536352 90520.78170850115 104267.20711034139 90925.52639491763 106603.04395697768 74848.90618283549 68404.1001918125 69815.98168089348 83528.47672323098 88632.76407159724 1.0370621795244108 1.0213015768681069 1.1763957516445578 1.0258681126255784 1.2027498529873684 0.8444834928353674 0.7717699082086158 0.7876994744798479 0.9424108296538848 1.0 16.435552484942214 -6.278453077173929 24.68904142632062 0.8499100042287508 1.0896498782552808 0.6275559036763996 0.08538759373501927 424.336208937282 615764.0288315384 0.029289571400461064 0.025898167639936628 5.26680116340983e-07 6.278453077173929 0.23973987402652996 S(ph)SSESLIFSGNQGR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSESLIFSGNQGR 14 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 S(0.673)S(0.326)SESLIFSGNQGR 110.25 0.0011078 255850000.0 641340.0 670810.0 537690.0 566740.0 602940.0 584270.0 499700.0 578020.0 701200.0 575870.0 True False 605763.5917204067 638583.2806936627 572350.3577344185 620602.7992034061 650387.9477406761 580623.3542060485 550214.5526020321 576014.9835308819 573879.7558135372 570768.2398200799 1.0613127175950754 1.1188136202094212 1.0027719095141616 1.08731137422614 1.1394956873313313 1.0172664028907341 0.9639894342675289 1.0091924240782142 1.0054514525798388 1.0 19.12254553327139 -6.482466017772713 10.98734826955684 0.9947325297449557 1.0797713328125442 0.5793103121359725 0.0356576969221029 0.6764912568355527 182.81469934391106 0.012736570023142286 0.011165155404132782 3.29256215626702e-07 6.482466017772713 0.08503880306758849 S(ph)SSFSDTLEESSPIAAIFDTENLEK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSFSDTLEESSPIAAIFDTENLEK 25 0 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 S(0.197)S(0.197)S(0.197)FS(0.197)DT(0.197)LEES(0.008)S(0.008)PIAAIFDTENLEK 63.726000000000006 0.019436000000000002 901770000.0 8303.8 11482.0 8338.4 7789.7 7293.1 16603.0 12142.0 17154.0 24172.0 19936.0 True False 7843.171660785095 10930.387485166635 8875.906605911721 8530.0307459413 7867.025477937318 16499.37451842986 13369.431854500463 17094.496777773707 19782.974126532812 19759.382549973307 0.39693404593736614 0.5531745467006711 0.4491995933305979 0.43169520729547406 0.39814126064116034 0.835014681086386 0.6766118233040902 0.8651331454583737 1.0011939430040306 1.0 14.270250245196266 -6.815961639785796 0.8725299649490613 0.9985863330636967 0.4412626138668343 0.8480913439416335 0.09146696460575707 0.22993481174924882 0.33893183234367574 0.07448616905504137 0.04175222715344661 1.5277009905285456e-07 6.815961639785796 -0.5573237191968624 down S(ph)SSFVLPK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSFVLPK 8 0 Q8WYP3;Q8WYP3-2 Q8WYP3 RIN2 Ras and Rab interactor 2 1 S(0.954)S(0.043)S(0.003)FVLPK;S(0.99)S(0.01)SFVLPK 131.11 0.00079464 620220000.0 772510.0 737420.0 712740.0 643460.0 622180.0 709100.0 599370.0 632360.0 813960.0 725370.0 True False 729657.3303394943 701993.2363100146 758684.36082432 704614.2449366964 671142.0262800517 704674.2438727102 659960.1688874934 630166.4907539341 666165.3822618175 718943.7861293212 1.0149017828888307 0.9764229830671941 1.055276331003507 0.9800686208447912 0.9335111301168252 0.980152075124766 0.9179579566861741 0.8765170558697644 0.9265889699782311 1.0 19.455519445876156 -5.613857884864467 3.5892633425304865 0.9338126267042898 1.0126417262016103 0.4648265799114487 0.036539925306436204 0.20452039377842887 5.152387562493507 0.011415164198537666 0.01524321442347731 2.4330000347599852e-06 5.613857884864467 0.07882909949732053 S(ph)SSKESLVR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSKESLVR 9 1 E7EVX2;Q13439-3;Q13439-4;Q13439;Q13439-5;Q86W71 E7EVX2 GOLGA4 Golgin subfamily A member 4 1 S(0.563)S(0.09)S(0.346)KES(0.001)LVR 126.71 0.0010026 1493400000.0 2413400.0 2189300.0 1833700.0 1883100.0 2304000.0 1922500.0 2027000.0 2072400.0 2605000.0 1794000.0 True False 2279523.8910063757 2084122.7417937045 1951903.2360237339 2062069.257825341 2485311.692033238 1910500.9643848336 2231908.9416136104 2065211.328101797 2131997.6667060237 1778106.5557108817 1.281995099610343 1.1721022764917923 1.0977425564034147 1.1596994855018303 1.3977293340778543 1.0744580847805383 1.2552166429200864 1.1614665732313953 1.1990269423722233 1.0 20.761910351753613 -10.397422203525576 2.9442939284460308 0.9966776160959975 1.1975507642065866 0.31253245825954057 0.08889642176690934 27986895.973948255 33797796.051563986 786247.2571515995 0.02151987159093657 4.004772005888401e-11 10.397422203525576 0.2008731481105891 S(ph)SSKGSVEEIMSQPK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSKGSVEEIMSQPK 15 1 A0A087WVA8;Q8IWB9;Q8IWB9-2;J3KRZ8 A0A087WVA8 TEX2 Testis-expressed sequence 2 protein 1 S(0.324)S(0.324)S(0.263)KGS(0.088)VEEIMSQPK 155.93 1.1576000000000001e-06 844940000.0 1078200.0 1146300.0 876300.0 974960.0 834240.0 998380.0 911980.0 915590.0 1178300.0 849510.0 True False 1018390.096661586 1091230.0273686212 932787.7001295745 1067619.9052675862 899889.9418237014 992148.7400897429 1004171.8384670835 912414.0319903115 964350.4225257981 841984.00230878 1.2095124062560427 1.2960222811554505 1.1078449205350747 1.2679812233250234 1.0687732063271265 1.1783463074942049 1.1926257930240634 1.083647705287045 1.1453310512806427 1.0 19.683433296791375 -13.999977105693414 0.03793777005060131 0.11153664714147866 1.6998140001343378 0.48623195419443543 0.0626729211641514 752.2655733766708 2.1308013694008046 78.03864592505548 24.907523697961917 1.000052717478576e-14 13.999977105693414 1.588277352992859 S(ph)SSLDALGPTRK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSLDALGPTRK 12 1 Q9H425;Q9H425-2;Q9H425-3;E5RI90 Q9H425 C1orf198 Uncharacterized protein C1orf198 1 S(0.352)S(0.352)S(0.297)LDALGPTRK 51.771 0.051485 0.0 237490.0 280030.0 268480.0 199650.0 229600.0 218300.0 198450.0 214430.0 282410.0 175470.0 True False 224315.9562754222 266576.9384664008 285786.6503831884 218624.67597303895 247668.2137547006 216937.50872572645 218511.26268535818 213686.19237833825 231131.46297675566 173915.47231359445 1.289798735508411 1.532795989454719 1.6432502903932218 1.2570743307923025 1.42407234077552 1.247373254603576 1.25642221349548 1.2286784466941016 1.3289873517405777 1.0 17.40802676152144 -7.827438621209839 0.20396989499006604 0.8884858004333737 1.5712947632564918 0.537482253119034 0.11493377048084859 2.56213968076189 0.4693412265153739 0.6909823638602484 0.5115222794481097 1.4878576379730857e-08 7.827438621209839 0.6828089628231181 S(ph)SSLDGEHHDGYHR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSLDGEHHDGYHR 14 0 Q9C0J8 Q9C0J8 WDR33 pre-mRNA 3 end processing protein WDR33 1 S(0.368)S(0.368)S(0.264)LDGEHHDGYHR;S(0.465)S(0.465)S(0.07)LDGEHHDGYHR;S(0.456)S(0.456)S(0.088)LDGEHHDGYHR 159.34 7.2875e-08 930583000.0 486589.0 518902.0 542971.0 642081.0 478638.0 543453.0 523216.0 466191.0 589312.0 417855.0 True False 459596.9381788767 493973.1690322192 577971.7794443173 703104.1851913085 516304.08752231015 540061.1082433452 576107.7793760757 464573.8922307971 482307.79614658776 414153.1297862707 1.1097270674160011 1.1927307401664227 1.395550915533555 1.6976913480145734 1.2466502131440025 1.3040131038537628 1.3910501646417204 1.1217442506604904 1.164563929277775 1.0 18.659804765679798 -7.612390458887694 1.3380725293538729 1.0235539705693215 1.3429285689497406 0.330706351914851 0.15351401602589876 0.525065584057105 1.7406967529797064 0.15229519936050556 0.04967682751354338 2.4412347374960305e-08 7.612390458887694 0.31937459838041904 S(ph)SSLEGFHNHFK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSLEGFHNHFK 12 0 B7Z3B9;Q13480;Q13480-2 B7Z3B9 GAB1 GRB2-associated-binding protein 1 1 S(0.382)S(0.382)S(0.236)LEGFHNHFK 177.38 1.7191e-06 218720000.0 82210.0 125620.0 90652.0 205790.0 113280.0 100550.0 104240.0 113690.0 148980.0 90407.0 True False 77649.64741842795 119585.02664053593 96495.57296832839 225348.21972698026 122194.49152496729 99922.43015287121 114777.59648436235 113295.63592544539 121928.98748017791 89606.06431558172 0.8665668781630145 1.3345639890997993 1.076886633793921 2.514876883034736 1.3636855101080332 1.1151302193226174 1.2809132658714877 1.264374646859077 1.3607224958654445 1.0 16.451308753148798 -6.002899193065631 24.99933493697758 1.2270846992743443 1.4792933653516431 0.06946074968661509 0.41436615714032515 362.0232114039241 3121718.1479575126 0.13505440138836358 0.15039816354357582 9.933465938418978e-07 6.002899193065631 0.25220866607729886 S(ph)SSLESLQTAVAEVTLNGDIPFHR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSLESLQTAVAEVTLNGDIPFHR 24 0 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10;F5GZI3 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 S(0.332)S(0.332)S(0.332)LES(0.005)LQTAVAEVTLNGDIPFHR 126.28 7.1876e-05 34616000.0 14523.0 16210.0 14575.0 14917.0 14132.0 15140.0 11394.0 18475.0 20590.0 16695.0 True False 13717.380239117261 15431.247268293951 15514.527820824525 16334.707195040406 15244.107999919132 15045.505644102155 12545.816714723958 18410.914537097422 16851.37503166103 16547.095288513457 0.8289902245646397 0.9325653233535135 0.9375982642460691 0.9871646298175073 0.9212558297468182 0.9092535808714618 0.7581884612360287 1.1126372463617695 1.0183887103955216 1.0 14.014290365122742 -7.283979772771785 24.998725408073735 1.0491347342935828 0.9043417760401338 0.5084697335776247 0.06595693946032788 709.5622688262716 786945.0842274014 0.036557583329157865 0.017583019839318603 5.200202158664209e-08 7.283979772771785 -0.14479295825344907 S(ph)SSLESLQTAVAEVTLNGDIPFHRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSLESLQTAVAEVTLNGDIPFHRPR 26 1 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10;F5GZI3 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 S(0.333)S(0.333)S(0.333)LESLQTAVAEVTLNGDIPFHRPR 199.46 8.7508e-16 37088000.0 10247.0 12175.0 12294.0 12203.0 8974.0 10066.0 9363.9 10134.0 10423.0 9122.1 True False 9678.578483111929 11590.094724952427 13086.490911095485 13362.76945103427 9680.20274492459 10003.174360206893 10310.49439485726 10098.84751929338 8530.445942447937 9041.285290886408 1.0704870128219393 1.281907865094713 1.4474148851697706 1.4779723259594415 1.0706666622589833 1.1063885319811848 1.1403792782924582 1.116970341536838 0.9434992556917328 1.0 13.142312162499577 -5.784961083064681 24.968514989663372 1.0748724137954502 1.3259049132265681 0.5374119481900853 0.11619052032148906 193.3453739045983 205236.8856369308 0.0383154976200785 0.043469878485877876 1.640736792306326e-06 5.784961083064681 0.25103249943111794 S(ph)SSLGNLKK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSLGNLKK 9 1 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;H0YGH8;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.969)S(0.015)S(0.015)LGNLKK 113.44 0.004301 0.0 4580300.0 4005800.0 3980800.0 3614400.0 4323500.0 3662200.0 3744300.0 3980700.0 4827900.0 3598700.0 True False 4326221.628398315 3813355.355171618 4237408.737505204 3957911.4892910155 4663734.852650037 3639342.8513758816 4122810.3848464936 3966891.8808023673 3951275.0614548973 3566818.317746236 1.212907763446702 1.0691195949619214 1.188008011628328 1.109647628980413 1.3075336160090456 1.0203331168478107 1.1558789984715487 1.1121653887066851 1.1077870273896058 1.0 21.76620630075492 -8.539440550781348 0.4585987284182431 0.9889452206334963 1.1603951102262633 0.28863116511361286 0.07365288464359128 2.8621919155171454 1.0960197150001216 0.13836432311340124 0.04228176579142561 2.887749047105502e-09 8.539440550781348 0.17144988959276697 S(ph)SSLKER ddPTM_KYSE-520_SHP099_60min_R1 2 SSSLKER 7 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 S(0.658)S(0.313)S(0.029)LKER;S(0.697)S(0.28)S(0.022)LKER 122.13 0.0015941 4588490000.0 2041470.0 1620980.0 1370470.0 1912270.0 2415700.0 2443100.0 2820700.0 1422090.0 1978940.0 3587800.0 True False 1928225.589530448 1543105.6876594145 1458812.6890295304 2094011.5658550605 2605801.84654717 2427851.7066780697 3105843.883379137 1417157.1017083027 1619614.3810177404 3556014.883266161 0.5422433968441082 0.4339424154046534 0.4102380718074011 0.5888646798721308 0.7327871035662734 0.682745091451393 0.873405760474898 0.3985239511727407 0.4554577059391107 1.0 21.761829931728457 -5.465972828417497 4.470772235493338 0.6690886045825687 0.46145398643945645 0.2634777925813586 0.16869034126848903 0.3332504615158293 13.677445367908513 0.04995158141290856 0.07352105754840504 3.4200083908610408e-06 5.465972828417497 -0.20763461814311224 S(ph)SSLVDIR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSLVDIR 8 0 Q96Q42;Q96Q42-3 Q96Q42 ALS2 Alsin 1 S(0.407)S(0.407)S(0.185)LVDIR;S(0.396)S(0.396)S(0.209)LVDIR 82.749 0.007902 159640000.0 945000.0 824250.0 724030.0 747440.0 886090.0 846930.0 775010.0 901440.0 884830.0 839760.0 True False 892578.9661892042 784651.792775526 770702.1322889589 818476.4728739689 955820.2418375553 841643.9957172683 853355.5741687048 898313.115037677 724167.1767491325 832320.3797233946 1.0723983071108212 0.9427280791037336 0.9259681140393158 0.9833670937457683 1.1483801972447238 1.0112019556663652 1.0252729537300298 1.0792876600428958 0.8700582064202191 1.0 19.666779437020633 -4.200766970121997 21.02494083775789 1.004133479839704 1.0724021112738638 0.07731311490351811 0.07433509497329864 31737.88530325671 10995224.39711054 0.01896046261909666 27.158541744879173 6.298440483331882e-05 4.200766970121997 0.06826863143415984 S(ph)SSMADGDNSYCLEAIIR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSMADGDNSYCLEAIIR 18 0 A0A0A0MR36;Q9ULV0-2;Q9ULV0;Q9ULV0-3 A0A0A0MR36 MYO5B Unconventional myosin-Vb 1 S(0.333)S(0.333)S(0.333)MADGDNSYCLEAIIR 177.6 7.3497e-09 247450000.0 71879.0 72468.0 63182.0 61674.0 58451.0 74494.0 66747.0 81325.0 93612.0 79174.0 True False 67891.72858276597 68986.52850331433 67254.81281477428 67535.47841703576 63050.761159303234 74029.0553138538 73494.43814794444 81042.9025563976 76614.42056648154 78472.57995643998 0.8651649865526604 0.8791163555678768 0.8570485748283966 0.8606251821276248 0.8034750634463991 0.9433748113665591 0.9365620219029513 1.0327544041674737 0.9763209086410832 1.0 16.259901012261864 -6.67541077387382 1.8821658356737707 0.9989216589363608 0.8561278824615443 0.8197895484252464 0.029607512818436193 0.13366417441873904 0.9686402797873864 0.01425816447084316 0.009622602026942602 2.111490958645516e-07 6.67541077387382 -0.1427937764748165 S(ph)SSMELHREENR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSMELHREENR 12 1 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-5 DENND4C DENN domain-containing protein 4C 1 S(0.867)S(0.067)S(0.067)MELHREENR 103.21 0.00067184 11758000.0 15655.0 18460.0 14299.0 11118.0 14651.0 14472.0 11940.0 10270.0 16558.0 10850.0 True False 14786.585942531203 17573.153890975107 15220.736419208915 12174.651377251414 15803.950347213085 14381.674879884165 13147.011723170444 10234.375767036014 13551.484593212403 10753.877441172266 1.3750004148196184 1.6341225745882668 1.4153719439776062 1.1321173636068769 1.469604841013542 1.3373478504434617 1.222536875195902 0.9516916873027315 1.260148692166532 1.0 13.392569314391467 -6.483295888335772 0.3852858229689684 0.9929416312295536 1.5389231248826385 0.5229616360433369 0.13878081154779798 1.1469379155453538 0.3771044382542417 0.15765397541313436 0.23263515318578093 3.2862765791161764e-07 6.483295888335772 0.5459814936530849 S(ph)SSMSYVDGFIGTWPK ddPTM_KYSE-520_SHP099_60min_R1 3 SSSMSYVDGFIGTWPK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.762)S(0.029)S(0.207)MS(0.001)YVDGFIGTWPK;S(0.333)S(0.333)S(0.333)MSYVDGFIGTWPK;S(0.328)S(0.328)S(0.328)MS(0.011)Y(0.005)VDGFIGTWPK 157.68 1.6379e-05 220850000.0 453717.0 434532.0 473146.0 381789.0 400157.0 357123.0 387762.0 445677.0 543153.0 436645.0 True False 428548.41354758426 413656.43047417037 503645.74822036625 418074.11177095113 431647.07931811793 354894.0628889494 426960.7671524303 444131.05050879327 444530.106972889 432776.6650046699 0.990229945838138 0.9558196268962579 1.1637544002399751 0.9660273891302339 0.9973899108295504 0.820039737782812 0.9865614338236632 1.0262361315252542 1.027158215584688 1.0 18.723263186656926 -2.810849122923084 12.986528880902473 0.9920966390327629 0.6996606787553532 0.0 0.07974021296025892 0.0 0.0 0.018916762782329535 0.0 0.001545791365484308 2.810849122923084 -0.2924359602774097 S(ph)SSPAGETEGDREPQAR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPAGETEGDREPQAR 17 1 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.452)S(0.452)S(0.096)PAGETEGDREPQAR 98.227 0.00039163 1130700000.0 371710.0 323350.0 324060.0 356790.0 341540.0 360200.0 367310.0 429250.0 408420.0 424540.0 True False 351090.50531448575 307815.78064175526 344949.4261143329 390699.21432717453 368417.25490322575 357951.85819059407 404441.2794001455 427761.03193770273 334261.2234303547 420778.90588712227 0.834382380871224 0.7315380508269339 0.8197878298748862 0.9285142597713373 0.8755601807711744 0.8506886946624123 0.9611728956504311 1.0165933366737103 0.7943868353515403 1.0 18.682702856978548 -5.141426068540933 3.883074451169592 0.9160482278327539 0.7813702317026557 0.414869427651973 0.06753169380481387 0.2238837331173017 5.890660533119746 0.01845006363195368 0.034005416231625854 7.220610714410431e-06 5.141426068540933 -0.13467799613009812 S(ph)SSPAGETEGDREPQARPGEGTAPLPPPGQK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPAGETEGDREPQARPGEGTAPLPPPGQK 31 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.449)S(0.449)S(0.074)PAGET(0.028)EGDREPQARPGEGTAPLPPPGQK;S(0.33)S(0.33)S(0.33)PAGET(0.011)EGDREPQARPGEGTAPLPPPGQK 135.88 1.9068000000000001e-06 1709220000.0 416530.0 417930.0 400960.0 315300.0 354560.0 356590.0 344990.0 409860.0 489070.0 377270.0 True False 393424.250568031 397852.01547428075 426806.5231586827 345266.0172015982 382461.854829559 354364.3895396559 379864.9559779369 408438.2913220434 400267.21645140677 373927.68131161894 1.052139946387559 1.0639811796728793 1.141414622371849 0.9233497129458703 1.0228230589615748 0.9476816166608975 1.0158781362361082 1.0922922044427743 1.070440185244904 1.0 18.51239975016023 -5.245119033396316 24.992528215858623 1.012336233818964 1.0836588325665792 0.3074983190613012 0.05182560867370111 1172.271623807762 1795181.4167165656 0.014977929975462117 0.025836301008524354 5.686970384239334e-06 5.245119033396316 0.07132259874761515 S(ph)SSPALKPKPNPPSPENTASSAPVDWR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPALKPKPNPPSPENTASSAPVDWR 27 2 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 S(0.31)S(0.31)S(0.257)PALKPKPNPPS(0.123)PENTASSAPVDWR 179.41 5.756100000000001e-11 831950000.0 277990.0 239120.0 211360.0 230700.0 240640.0 276890.0 279340.0 282340.0 280040.0 288440.0 True False 262569.34054067417 227632.3162735627 224984.60378795676 252625.65863751562 259576.99894569372 275161.82680286944 307578.413295681 281360.62843865104 229191.7952339173 285884.6460029245 0.9184450589136858 0.7962383410798288 0.7869768696345283 0.8836629114909913 0.9079781043681456 0.9624924970614009 1.07588293948649 0.9841753741324494 0.8016932648826924 1.0 18.125073613712352 -5.84415281735812 1.9926361139099225 0.9693477471572646 0.8323431152355972 0.3751436313846903 0.07262928872800282 0.3424971301858111 2.793076268584421 0.026445167381590643 0.03238746040545051 1.4316840368518529e-06 5.84415281735812 -0.13700463192166734 S(ph)SSPAPADIAQTVQEDLR ddPTM_KYSE-520_SHP099_60min_R1 4 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 S(0.431)S(0.431)S(0.138)PAPADIAQTVQEDLR;S(0.401)S(0.299)S(0.299)PAPADIAQTVQEDLR;S(0.333)S(0.333)S(0.333)PAPADIAQTVQEDLR;S(0.428)S(0.428)S(0.144)PAPADIAQTVQEDLR 268.93 1.3009e-37 24049892000.0 2877632.9 3231881.1 2348264.9 2208662.7 2323751.8 3022767.6 2158427.0 2736123.8 3405148.1 3249689.1 True False 2718004.866618032 3076616.68080357 2499637.812810687 2418573.338949348 2506617.846320864 3003901.3861696906 2376621.8653775193 2726632.8251538943 2786859.0418381756 3220899.382793862 0.8438651890641766 0.9552042194298107 0.7760682702986081 0.7508999976433405 0.7782353772711091 0.9326281355501569 0.7378752276688624 0.8465439310894485 0.8652425023661582 1.0 21.61903216260882 -8.2301564426715 2.038928915295925 0.9998066714022876 0.8264046533165954 0.363653490141012 0.06846779893578535 1.0432731758957416 7.081322519941247 0.06756520262351137 0.018704894274745282 5.886315787843473e-09 8.2301564426715 -0.17340201808569222 S(ph)SSPATEQSWMENDFDELR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSPATEQSWMENDFDELR 19 0 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.333)S(0.333)S(0.333)PATEQSWMENDFDELR;S(0.333)S(0.333)S(0.333)PATEQSWMENDFDELR;S(0.313)S(0.313)S(0.313)PAT(0.061)EQSWMENDFDELR 298.15 5.099599999999999e-44 235875000.0 177080.0 144750.0 130738.0 123639.0 115007.0 166139.0 122201.0 161536.0 166184.0 157995.0 True False 167257.01939977153 137795.99272582034 139165.58066819602 135389.6133865793 124057.39659968157 165102.0648748669 134554.26964683025 160975.6693187857 136009.17475772512 156595.2872182499 1.068084629945869 0.8799498067510255 0.8886958422588941 0.8645829372750162 0.7922166675857899 1.0543233312300193 0.8592485255274595 1.027972630456182 0.8685393869367632 1.0 17.256681269382693 -6.264813123653835 24.999531624101905 0.957342041670038 0.8952121270083112 0.11550735030360226 0.08684959603597243 710.7279058439942 5266495.463310737 0.029185777369539662 0.02675548718312428 5.434841416983308e-07 6.264813123653835 -0.06212991466172679 S(ph)SSPATEQSWMENDFDELREEGFR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPATEQSWMENDFDELREEGFR 24 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.333)S(0.333)S(0.333)PAT(0.002)EQSWMENDFDELREEGFR 106.51 0.00060245 529980000.0 16275.0 16445.0 20132.0 8555.8 10088.0 9797.7 14164.0 16123.0 17695.0 13685.0 True False 15372.193306591844 15654.957515551758 21429.74093233891 9368.940659604928 10881.868207131629 9736.54892002772 15595.835347318776 16067.073076136483 14482.034054649936 13563.76154676889 1.133328188761454 1.1541752235596492 1.5799261037174328 0.6907332178688118 0.8022751041154854 0.7178354534216304 1.149816390795661 1.1845587981428296 1.0677004313821628 1.0 13.727469706424582 -5.266685547980309 24.996241430628082 0.945551839161981 1.2756463740452888 0.3944409903063195 0.1953572852637975 498.0874471778354 2373221.6085833395 0.05996357995229329 0.0919619546151689 5.4114599926284505e-06 5.266685547980309 0.33009453488330776 S(ph)SSPATEQSWMENDFDELREEGFRR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPATEQSWMENDFDELREEGFRR 25 2 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.35)S(0.35)S(0.299)PAT(0.002)EQSWMENDFDELREEGFRR 80.98 0.0028804000000000004 671380000.0 181080.0 181940.0 213950.0 147940.0 140480.0 153090.0 141550.0 161870.0 221460.0 146410.0 True False 171035.13142596922 173199.3293024923 227741.55933210332 162000.17312021728 151534.97677813747 152134.50852414768 155859.25539487228 161308.5107507422 181248.44655228994 145112.92130525634 1.1786347479435237 1.1935486360870236 1.5694092385682954 1.1163731779573047 1.0442555729366914 1.048387057167162 1.0740549772753192 1.1116068045478678 1.2490165928850656 1.0 17.146816461608815 -5.488455813100696 24.992122431147816 1.0898472505430048 1.3086757948741918 0.43320386365597585 0.1166510591453215 591.1888448686169 429221.3086774913 0.033092094972297335 0.04905510635120355 3.247462815037201e-06 5.488455813100696 0.21882854433118704 S(ph)SSPELVTHLK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPELVTHLK 11 0 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.797)S(0.131)S(0.071)PELVTHLK;S(0.541)S(0.172)S(0.288)PELVTHLK 243.11 1.7177e-14 7323940000.0 8174000.0 7349900.0 6808500.0 7289500.0 6919500.0 7214200.0 6747100.0 7800600.0 8771100.0 7055400.0 True False 7720571.925534986 6996799.771575176 7247386.803985169 7982291.888331907 7464025.283430547 7169173.501828389 7429162.713350361 7773541.539273729 7178489.341437689 6992894.645018133 1.1040595229094812 1.0005584420694547 1.0363929634129896 1.1414860788755967 1.0673727636877892 1.0252082815141281 1.0623873360716272 1.1116342993686803 1.0265404679808492 1.0 22.73745833902593 -8.917442891278691 12.656660849970237 0.9999998277972808 1.0638811950685179 0.17310652321614617 0.041936732972897885 0.0 0.0 0.04082139400799478 0.009900642310583435 1.2093642010869738e-09 8.917442891278691 0.06388136727123706 S(ph)SSPNSPLPMFR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPNSPLPMFR 12 0 A0A0U1RR27;Q7Z401;Q7Z401-2;H3BTW5 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.358)S(0.358)S(0.284)PNSPLPMFR 69.45100000000001 0.024835 61736000.0 168330.0 160070.0 141110.0 134720.0 147350.0 190420.0 142150.0 145000.0 190420.0 155200.0 True False 158992.39934246434 152379.9969300318 150206.17638398285 147523.7482949551 158945.60669318467 189231.51814728757 156519.90925030792 144497.02884325458 155844.52809756665 153825.04874377305 1.0335923872015056 0.9906058744948082 0.9764741023042471 0.9590359275015472 1.0332881932508986 1.2301736270696146 1.0175189966038867 0.9393595517979898 1.0131284167974324 1.0 17.230930924134118 -3.9335756984527865 17.46678582604968 1.019376539668895 1.2391055561350646 0.003486061616756908 0.07599931849075546 15313.226145218692 261096.80985948595 0.01997471594461592 134781.3475313984 0.00011652639251521504 3.9335756984527865 0.2197290164661696 S(ph)SSPTLTPSQEGSPVFAGFEGR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPTLTPSQEGSPVFAGFEGR 22 0 P0C860 P0C860 MSL3P1 Putative male-specific lethal-3 protein-like 2 1 S(0.333)S(0.333)S(0.333)PT(0.001)LTPSQEGSPVFAGFEGR;S(0.321)S(0.321)S(0.321)PT(0.036)LTPSQEGSPVFAGFEGR 127.32 3.0939e-07 0.0 76185.0 90098.0 71643.0 65986.0 76724.0 81056.0 65219.0 89746.0 106296.0 86249.0 True False 71958.86617896779 85769.55684014488 76261.22241285302 72257.2896005857 82761.74230015541 80550.09943780345 71811.97299610163 89434.69207287385 86995.32590410102 85484.90096070665 0.84177282034922 1.003329896581024 0.8921016642214592 0.8452637692567363 0.9681445655320704 0.9422728286815061 0.8400544679710183 1.0462045468588976 1.0176689090870987 1.0 16.38338200150389 -7.276767253592801 24.939718611819846 1.0239525578269932 0.9096127973816011 0.5007219855922403 0.05317138992694418 685.3804546430052 1115164.219206236 0.028347349900633954 0.013700228984767538 5.2872853121360177e-08 7.276767253592801 -0.11433976044539218 S(ph)SSPTSSLTQPIEMPTLSSS(ph)PTEERPTVGPGQQDNPLLK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPTSSLTQPIEMPTLSSSPTEERPTVGPGQQDNPLLK 39 1 Q7LBC6;Q7LBC6-2 Q7LBC6 KDM3B Lysine-specific demethylase 3B 2 S(0.166)S(0.166)S(0.166)PT(0.166)S(0.166)S(0.166)LT(0.003)QPIEMPTLSS(0.081)S(0.459)PT(0.459)EERPTVGPGQQDNPLLK;S(0.166)S(0.166)S(0.166)PT(0.166)S(0.166)S(0.166)LT(0.002)QPIEMPTLS(0.01)S(0.067)S(0.462)PT(0.462)EERPTVGPGQQDNPLLK 222.52 1.1854999999999998e-22 1527740000.0 334270.0 335610.0 292770.0 326467.0 367970.0 368100.0 315330.0 313010.0 368920.0 318260.0 True False 315727.376749275 319486.79183911986 311642.4226485623 357494.3255241178 396927.1455370962 365802.5513602377 347206.6337242327 311924.2413670832 301933.42771638616 315440.4640025329 1.000909562277146 1.012827548454768 0.987959561985871 1.13331790407602 1.2583266601266128 1.1596563951202545 1.1007041687633479 0.9888529753258877 0.9571803943135264 1.0 18.267008212153627 -7.283346148962713 5.871550080384329 0.9784222211818895 1.0967987933830434 0.3005106507722446 0.07775748203126824 0.2599993147576422 32.408417465885705 0.04909490262875373 0.024225639249556292 5.2077946491138324e-08 7.283346148962713 0.11837657220115394 S(ph)SSQENLLDEVMK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSQENLLDEVMK 13 0 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.406)S(0.406)S(0.188)QENLLDEVMK;S(0.333)S(0.333)S(0.333)QENLLDEVMK 136.57 0.00028763 318453000.0 1503250.0 1551380.0 1156950.0 940980.0 1084690.0 1427360.0 1115320.0 1323740.0 1666000.0 1392640.0 True False 1419861.7258454177 1476849.3761311441 1231528.8481854496 1030410.456284048 1170048.9319581303 1418451.3167876902 1228067.4300742429 1319148.2549032373 1363496.396442317 1380302.2930575241 1.0286599775910428 1.0699463324513918 0.8922167661240896 0.7465107183163288 0.8476758590079141 1.027638165872826 0.8897090414549236 0.9556951846984013 0.9878244811301586 1.0 20.396552828309964 -9.110278623133642 14.07043565459678 1.0000049536813735 0.9343241661137384 0.03657722448997058 0.09266309234374019 0.0 0.0 0.09836507242544233 0.023857034322448824 7.757492723082212e-10 9.110278623133642 -0.06568078756763518 S(ph)SSQIPEGFGLTSGGSNYSLAR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSQIPEGFGLTSGGSNYSLAR 22 0 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 S(0.333)S(0.333)S(0.333)QIPEGFGLTSGGSNYSLAR 92.492 0.0024413 101240000.0 91461.0 80038.0 56358.0 68034.0 51699.0 76641.0 59599.0 83050.0 98553.0 74316.0 True False 86387.4760070167 76192.85434051273 59990.926855988284 74499.9309048321 55767.41717292804 76162.65509046457 65623.84855018726 82761.91893401569 80658.25951895541 73657.61805697306 1.1728247299579695 1.03441919994723 0.8144565143226081 1.011435515701954 0.757116760547331 1.0340092050160228 0.8909309081842451 1.1236029770878633 1.0950430063672092 1.0 16.168547123610946 -7.2672820888910366 24.785497691119676 1.0819922467278356 0.9537313726821463 0.16479090310527822 0.11615073218152486 726.3273472566602 3081145.235863136 0.06141195566098136 0.030780996689240236 5.4040319884851696e-08 7.2672820888910366 -0.1282608740456893 S(ph)SSSGSDDYAYTQALLLHQR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSSGSDDYAYTQALLLHQR 20 0 F6SS63;Q8N5C8-2;Q8N5C8 F6SS63 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 1 S(0.369)S(0.369)S(0.26)S(0.003)GSDDYAYTQALLLHQR;S(0.391)S(0.391)S(0.203)S(0.015)GSDDYAYTQALLLHQR;S(0.33)S(0.33)S(0.33)S(0.008)GS(0.002)DDYAYTQALLLHQR 259.93 2.1859999999999998e-35 2027580000.0 379480.0 411632.0 426970.0 363082.0 379130.0 426720.0 375406.0 472470.0 568340.0 463860.0 True False 358429.4879253745 391856.58084777184 454493.1693761544 397589.2041154163 408965.37404538254 424056.6821962531 413355.7020894909 470831.11184532655 465143.78268548945 459750.5612776192 0.7796172927539674 0.8523243120330858 0.9885646862793275 0.8647932979364717 0.8895375198866367 0.9223625111360931 0.8990868895098251 1.0241012224909853 1.0117307554620114 1.0 18.810491810361558 -1.0000000021906954 0.1754070823889485 1.0300214833660033 0.1190539785137022 0.5882276362105001 0.04927094599881144 45.86828921282087 0.5069731968101873 0.1282025243002035 11.062213578449166 0.09999999949557374 1.0000000021906954 -0.9109675048523012 S(ph)SSSPELQTLQDILGDPGDKADVGR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSSPELQTLQDILGDPGDKADVGR 25 1 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 S(0.331)S(0.331)S(0.331)S(0.007)PELQTLQDILGDPGDKADVGR;S(0.331)S(0.331)S(0.331)S(0.007)PELQTLQDILGDPGDKADVGR 124.5 0.00010465 829040000.0 174577.0 165915.0 169049.0 140636.0 150933.0 169075.0 131194.0 150114.0 211943.0 152228.0 True False 164892.86579937843 157944.19435650785 179946.16902796354 154002.00315624478 162810.56840870337 168019.74020981308 144456.36985005235 149593.28957087104 173459.49384824355 150879.37835159182 1.0928787459286264 1.0468242650659192 1.1926491943030004 1.02069616695647 1.0790776724259064 1.1136030784689432 0.957429513749904 0.991476046662097 1.149656737344408 1.0 17.203036111428556 -6.734599119878457 24.999801782865518 1.0239301646065477 1.0898379458040133 0.20967389301611405 0.06304456741421735 355.1459057329906 330792.7480661144 0.023805559528231903 0.018434386101420338 1.842471930010086e-07 6.734599119878457 0.06590778119746554 S(ph)SSSPGGSLDLVSALEDYEEPFPVYQK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSSPGGSLDLVSALEDYEEPFPVYQK 27 0 A0A1W2PR91;A0A1W2PQT1;C9J366;P0DPB3-2;P0DPB3;B3KU38-2;B3KU38;A0A1W2PPY3 A0A1W2PR91 IQCJ-SCHIP1 1 S(0.238)S(0.238)S(0.238)S(0.238)PGGS(0.047)LDLVSALEDYEEPFPVYQK;S(0.199)S(0.199)S(0.199)S(0.199)PGGS(0.199)LDLVS(0.003)ALEDYEEPFPVYQK 173.55 1.5663e-10 135589000.0 121052.0 174326.0 115810.0 119531.0 109482.0 157031.0 107875.0 156562.0 176281.0 155283.0 True False 114337.00424882068 165951.1172913393 123275.29790255145 130891.19030169438 118097.61053263152 156050.91128130796 118780.05775854371 156018.92296384546 144272.81408238158 153907.31342834592 0.742895199077412 1.0782536163793188 0.8009710205223243 0.8504546495292631 0.7673294264058075 1.0139278492049049 0.7717635706365813 1.0137200077661197 0.9374006398308691 1.0 17.23170226228304 -7.284436274666286 24.747909396096926 0.981670255130617 0.8687585512586081 0.22330534309120786 0.10428467897886474 1172.461539413813 1261726.615546119 0.05386592601123758 0.02590322711349795 5.194738918793683e-08 7.284436274666286 -0.11291170387200888 S(ph)SSSQTLTQFDSNIAPADPDTAIVHPVPIR ddPTM_KYSE-520_SHP099_60min_R1 4 SSSSQTLTQFDSNIAPADPDTAIVHPVPIR 30 0 Q96D71;Q96D71-3;H0YE73 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.305)S(0.305)S(0.305)S(0.083)QT(0.003)LTQFDSNIAPADPDTAIVHPVPIR;S(0.306)S(0.306)S(0.306)S(0.072)QT(0.011)LTQFDSNIAPADPDTAIVHPVPIR;S(0.43)S(0.43)S(0.11)S(0.028)QT(0.002)LTQFDSNIAPADPDTAIVHPVPIR;S(0.321)S(0.321)S(0.321)S(0.015)QT(0.02)LT(0.001)QFDSNIAPADPDTAIVHPVPIR 198.63 8.5471e-16 2619400000.0 82845.0 81094.0 58524.2 78347.0 68686.0 95986.0 70705.0 67097.4 128995.0 96250.0 True False 78249.4227025869 77198.1225154244 62296.76357403078 85793.07532411549 74091.1974301193 95386.91576980104 77852.55141430195 66864.65478005093 105572.75969932557 95397.299881367 0.8202477722104856 0.8092275421990507 0.6530243901190184 0.8993239371638924 0.7766592715124717 0.9998911487895478 0.8160875780668517 0.7009072045351562 1.1066640233068699 1.0 16.541660812416616 -7.589238378058122 0.3584329379275033 1.024803342490704 0.7693468310731391 0.27600949628095695 0.11501262282895308 1.8270844903482688 0.7367776741855991 0.17409177680922686 0.13269975276746643 2.5749074390185825e-08 7.589238378058122 -0.25545651141756487 S(ph)SSSSGDPSSDPLGSPTLLAL ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSSGDPSSDPLGSPTLLAL 21 0 P15407;E9PPX2;P15407-2 P15407 FOSL1 Fos-related antigen 1 1 S(0.199)S(0.199)S(0.199)S(0.199)S(0.199)GDPS(0.003)S(0.003)DPLGSPTLLAL 62.924 0.02187 12367000.0 34569.0 44982.0 37888.0 23687.0 27973.0 31182.0 27409.0 26142.0 41662.0 37922.0 True False 32651.388658406988 42820.99720064149 40330.32110294337 25938.205358243777 30174.315955401773 30987.381571624403 30179.769206061876 26051.319503588664 34097.23101355328 37586.04058286955 0.8687105146501755 1.1392792785989236 1.0730132910388164 0.6901020952461148 0.8028064538714463 0.824438570572592 0.8029515409988888 0.6931115674754519 0.9071780502757625 1.0 15.197909325461918 -5.249293162405805 24.931383970167563 0.8035447063189979 1.0382288727912867 0.4410060348397402 0.10723541345344667 580.6174369511225 1191775.8395875487 0.027613049589020174 0.047370740037360956 5.632573111050146e-06 5.249293162405805 0.23468416647228885 S(ph)SSTGNLLDKDDLAIPPPDYGAASR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSTGNLLDKDDLAIPPPDYGAASR 25 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;Q9UQB8-6;I3L3C6 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 S(0.344)S(0.344)S(0.299)T(0.013)GNLLDKDDLAIPPPDYGAASR;S(0.353)S(0.353)S(0.293)T(0.001)GNLLDKDDLAIPPPDYGAASR;S(0.349)S(0.349)S(0.289)T(0.013)GNLLDKDDLAIPPPDYGAASR 164.55 2.3056999999999999e-10 71446000000.0 35460500.0 36570200.0 26813400.0 22438500.0 23482000.0 30590400.0 22544700.0 29229600.0 37297500.0 31332800.0 True False 33493435.37624582 34813312.69901069 28541834.666956846 24571048.29361897 25329899.805696372 30399473.96666726 24823738.291068714 29128209.33983994 30525214.193461798 31055215.768549494 1.0785124027431676 1.121013389778703 0.9190673437813296 0.7912052029116079 0.8156407604595903 0.9788846483383212 0.7993420002642012 0.9379490246317628 0.9829335729290136 1.0 24.88833225573259 -4.806592083103627 5.671913678282701 0.8914838939304707 1.1003106017722508 0.5241509961402311 0.07451272710653983 0.124577940554776 9.310701585666337 0.019685590973736337 0.0436836921847819 1.5610180215045518e-05 4.806592083103627 0.20882670784178015 S(ph)SSVGSSSSYPIS(ph)PAVSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 S(0.348)S(0.297)S(0.297)VGS(0.007)S(0.002)S(0.005)S(0.019)Y(0.037)PIS(0.989)PAVSR 78.08800000000001 0.008795200000000001 1127700000.0 2337700.0 1891100.0 1792300.0 1871600.0 1821900.0 2074400.0 2225000.0 2156700.0 2447500.0 1846300.0 True False 2208023.120910583 1800248.7174010286 1907834.525781392 2049476.301282939 1965273.1648070116 2061452.9001403921 2449924.7139073894 2149218.9110775664 2003095.6964541222 1829943.218399666 1.206607450280101 0.9837729932272947 1.0425648766576725 1.1199671556340751 1.0739530850174113 1.126511948246781 1.3387982147609552 1.174473005210028 1.094621776410026 1.0 20.8033674529132 -6.524462388746307 24.980811489868238 1.1759615681183886 1.0813683249126154 0.07598398125461536 0.0961024842973031 93.89666061014438 1481094.5213784822 0.03590616659083579 0.028026206938210948 2.9890804994240143e-07 6.524462388746307 -0.09459324320577323 S(ph)SSVGSSSSYPISPAVSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 S(0.318)S(0.318)S(0.318)VGS(0.047)SSSYPISPAVSR 126.63 2.6064e-05 375310000.0 119290.0 134340.0 101230.0 98197.0 84516.0 140570.0 108340.0 129940.0 156290.0 137200.0 True False 112672.74590128045 127886.10475154898 107755.44777372688 107529.61335599543 91166.92836973988 139692.65048820598 119292.06449650638 129489.26846822404 127911.67575028203 135984.51473998473 0.8285704156588815 0.9404460867921566 0.7924096944403228 0.7907489581560241 0.6704213972014363 1.0272688089177768 0.8772474183888077 0.9522353976540622 0.9406341302527075 1.0 17.0530828481198 -6.278581433548929 24.999964422968873 0.9513525018901557 0.8106330104892392 0.5370716537722324 0.0716219649802203 762.7956132565836 1112457.5774892257 0.026310485970763724 0.023259719834782443 5.265244782560605e-07 6.278581433548929 -0.14071949140091655 S(ph)ST(ph)PPRQS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 2 SSTPPRQSPSR 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.956)S(0.048)T(0.996)PPRQS(0.986)PS(0.014)R;S(0.974)S(0.045)T(0.981)PPRQS(0.859)PS(0.141)R 97.223 0.008515700000000001 1516910000.0 217623.0 190425.0 170697.0 174029.0 178367.0 186660.0 173696.0 187400.0 215421.0 175711.0 True False 205551.01836930474 181276.69716624756 181700.40174485667 190568.66383627334 192403.46813059546 185494.98570198877 191254.88678959917 186749.95313948885 176305.9767214888 174154.3372410896 1.1802807878666342 1.0408968277103436 1.0433297535008887 1.09425160955056 1.10478711686774 1.0651183808600746 1.0981919245848957 1.072324445649393 1.0123547854993733 1.0 17.41000687752678 -7.75669893960682 3.2931319785161524 1.0002902200353148 1.0857949894816104 0.4392307248977364 0.03710535188565229 0.22589523397622194 4.712838322001249 0.03294436321370236 0.009431976073388627 1.7510601329417028e-08 7.75669893960682 0.08550476944629559 S(ph)STETCYSAIPK ddPTM_KYSE-520_SHP099_60min_R1 1 SSTETCYSAIPK 12 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-2 FLNB Filamin-B 1 S(0.761)S(0.239)TETCYSAIPK 198.32 2.6231e-08 0.0 225150.0 185940.0 176870.0 172460.0 198020.0 187970.0 175660.0 219010.0 210120.0 213010.0 True False 212660.4806746026 177007.1632983701 188271.32320200594 188850.54654801026 213603.0474203215 186796.80950606862 193417.42707639173 218250.30542731824 171967.50469415326 211122.89711927212 1.0072828839330574 0.8384081770077804 0.8917617452722033 0.8945052816384985 1.0117474245327747 0.8847775966267615 0.9161366659681738 1.0337595230327838 0.8145374426015083 1.0 17.687723527631825 S(ph)STGPEPPAPTPLLAER ddPTM_KYSE-520_SHP099_60min_R1 1 SSTGPEPPAPTPLLAER 17 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.498)S(0.498)T(0.003)GPEPPAPTPLLAER 153.79 1.8317e-05 0.0 152350.0 130130.0 102340.0 120500.0 110250.0 125470.0 121930.0 163820.0 147030.0 132010.0 True False 143898.8417978043 123878.3594708879 108937.00014978946 131952.28377035388 118926.04776330918 124686.89518926654 134255.87432212505 163251.7466558753 120333.05832467806 130840.49410222593 1.0998035645247248 0.9467891444532569 0.8325939220672521 1.008497290351558 0.9089391520517496 0.9529686970751458 1.0261033882769555 1.2477157609044673 0.9196927843352656 1.0 16.997449587131904 -6.89620020964193 4.598333674274426 1.0755307518866746 0.9525352520125883 0.15370127935004563 0.1005913356332488 0.30998430408117084 11.19053368668296 0.0423603438619138 0.027980194258290746 1.2699885058711662e-07 6.89620020964193 -0.12299549987408631 S(ph)STPPGESYFGVSSLQLK ddPTM_KYSE-520_SHP099_60min_R1 7 SSTPPGESYFGVSSLQLK 18 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.333)S(0.333)T(0.333)PPGES(0.002)YFGVSSLQLK;S(0.333)S(0.333)T(0.333)PPGES(0.002)YFGVSSLQLK;S(0.333)S(0.333)T(0.333)PPGESYFGVSSLQLK;S(0.333)S(0.333)T(0.333)PPGESYFGVSSLQLK;S(0.333)S(0.333)T(0.333)PPGES(0.001)YFGVSSLQLK;S(0.364)S(0.364)T(0.272)PPGESYFGVSSLQLK;S(0.327)S(0.327)T(0.327)PPGES(0.009)Y(0.008)FGVSSLQLK 174.39 8.7995e-10 13298516000.0 5005593.0 6736372.0 4874266.0 4239690.0 4410969.0 6754790.0 4657613.0 5491673.0 6853156.0 5991800.0 True False 4727922.777887738 6412746.577619482 5188468.985461345 4642628.862890726 4758087.165319504 6712630.850047877 5128449.9759624 5472623.668129108 5608795.62440398 5938717.313549859 0.7961185098170012 1.0798201428089649 0.873668287531259 0.7817561634560446 0.8011977863407282 1.130316614790242 0.8635618947986055 0.9215161084772792 0.9444456316529621 1.0 22.50171993044936 S(ph)STPPLHVHVDENTPVHVHIK ddPTM_KYSE-520_SHP099_60min_R1 2 SSTPPLHVHVDENTPVHVHIK 21 0 Q5BJF6-9;Q5BJF6-3;Q5BJF6-4 Q5BJF6-9 1 S(0.637)S(0.181)T(0.181)PPLHVHVDENTPVHVHIK;S(0.741)S(0.106)T(0.153)PPLHVHVDENTPVHVHIK 275.2 3.0164999999999995e-36 3821290000.0 3446230.0 3779330.0 4075640.0 4812140.0 3464440.0 3173540.0 3398810.0 3633060.0 4448740.0 2657960.0 True False 3255060.7520108162 3597765.3139100163 4338362.275654566 5269484.338777359 3737071.718032821 3153732.7596951076 3742394.8839890207 3620457.7628225787 3640960.959609114 2634412.542261592 1.2355926415444445 1.3656803010895948 1.6468044416195216 2.000250247158939 1.418559795811106 1.197129420355587 1.4205804231315446 1.3742941565691476 1.3820769910560096 1.0 21.329049854960843 -5.99423301827604 24.999865870746937 1.3073781155888045 1.5735173351216327 0.2726163911598688 0.21780032854735207 236.51098370935262 1025264.4242040929 0.0717835985286816 0.08116817624334885 1.013367523167897e-06 5.99423301827604 0.26613921953282826 S(ph)STSSEPTPTVK ddPTM_KYSE-520_SHP099_60min_R1 2 SSTSSEPTPTVK 12 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 S(0.867)S(0.133)TSSEPTPTVK;S(0.499)S(0.499)T(0.003)SSEPTPTVK 168.98 2.9619999999999998e-06 1548710000.0 3372800.0 3028940.0 2657030.0 2802610.0 2700100.0 3084310.0 3196820.0 3633200.0 3375470.0 3711420.0 True False 3185704.060489891 2883425.1758683706 2828306.4051983114 3068969.211764582 2912582.508532526 3065059.677223298 3519985.7635565954 3620597.2771952567 2762569.736674159 3678539.7062410684 0.8660241060018941 0.7838504967001731 0.768866624002933 0.8342900870575681 0.7917768302435318 0.8332272918036114 0.9568975856328347 0.9842485242316386 0.7509963075801899 1.0 21.810701733248926 -6.63391550961981 5.287546008195056 0.9211173471782163 0.8073284935049515 0.3850540140472265 0.06853983177981236 0.22074122639910515 9.39466861863768 0.025881583249854002 0.019811096912214724 2.3231887201419354e-07 6.63391550961981 -0.11378885367326474 S(ph)STVTEAPIAVVTSR ddPTM_KYSE-520_SHP099_60min_R1 2 SSTVTEAPIAVVTSR 15 0 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 S(0.988)S(0.011)T(0.001)VTEAPIAVVTSR;S(0.976)S(0.023)T(0.001)VTEAPIAVVTSR 157.37 8.4964e-07 803970000.0 575150.0 795610.0 556240.0 1412760.0 761940.0 528120.0 566560.0 629370.0 761910.0 607970.0 True False 543245.2829668996 757387.7013650438 592096.1204154673 1547028.2856382167 821900.3431544282 524823.807183833 623833.4138927516 627186.8623660629 623566.3501880941 602583.8587935028 0.9015264432316337 1.2569000817271976 0.9825953878037256 2.567324469552979 1.3639601047396825 0.8709556346806875 1.0352640629003815 1.0408291779036705 1.0348208653258695 1.0 19.200802502911085 -6.172326202891155 6.285779445375525 1.0025708728285976 1.4503171626882423 0.19183859193473607 0.42772670204647195 0.4272783635583355 24.890044935139738 0.1492297007849422 0.14925049291509032 6.724713666333673e-07 6.172326202891155 0.4477462898596447 S(ph)SVELPPYSGTVLCGTQAVDKLPDGQEYQR ddPTM_KYSE-520_SHP099_60min_R1 1 SSVELPPYSGTVLCGTQAVDKLPDGQEYQR 30 1 Q14694;Q14694-3;Q14694-2;H3BQC6 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 S(0.477)S(0.477)VELPPY(0.023)S(0.01)GT(0.01)VLCGT(0.003)QAVDKLPDGQEYQR 47.59 0.053336 0.0 74393.0 79173.0 66171.0 67587.0 66318.0 67288.0 48909.0 83633.0 98647.0 83152.0 True False 70266.27199123114 75369.41023890412 70436.48853734347 74010.44815922753 71536.84930219622 66868.03063278376 53853.19902584113 83342.89664308899 80735.19148850256 82415.33797127711 0.8525873183426114 0.9145070819848049 0.8546526686803317 0.8980178930409919 0.8680040762209554 0.811354200307814 0.6534366096346013 1.0112546850458242 0.9796136675025211 1.0 16.330625235840166 S(ph)SVGNGNLHR ddPTM_KYSE-520_SHP099_60min_R1 1 SSVGNGNLHR 10 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 S(0.5)S(0.5)VGNGNLHR 145.83 0.00012876 455390000.0 208420.0 201640.0 186730.0 224270.0 204040.0 190590.0 193580.0 194990.0 258490.0 226040.0 True False 196858.5271250307 191952.9117321897 198766.91457856342 245584.55337076553 220096.78717120728 189400.4571142294 213148.95555873806 194313.62520100814 211554.73200262565 224037.4614564589 0.8786857601637735 0.8567893533711337 0.8872039224439849 1.096176290224991 0.9824106457034755 0.8453963720305716 0.9513987266819796 0.8673264905689555 0.9442828472850767 1.0 17.773380460910392 -5.021374179973689 24.825604437626826 0.94964948137499 0.8688022766537244 0.243311388155952 0.06557302352492239 1066.409772508506 1238611.9797005574 0.018891508263767322 0.03316281544436724 9.519756062725147e-06 5.021374179973689 -0.0808472047212655 S(ph)SVKTPESIVPIAPELQPSTSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSVKTPESIVPIAPELQPSTSR 22 1 Q14676;Q14676-3;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.355)S(0.355)VKT(0.285)PES(0.005)IVPIAPELQPSTSR 97.87700000000001 0.0024990999999999998 1043400000.0 883390.0 1083400.0 821920.0 772290.0 850530.0 1037100.0 817220.0 1249200.0 1196000.0 1144800.0 True False 834386.595705694 1031351.8377834461 874902.2783184983 845688.2094025457 917461.8721462804 1030627.0742072877 899832.5728986051 1244866.8167654718 978836.5487064887 1134657.962640924 0.7353639803167236 0.9089539506539643 0.7710713775648809 0.7453243508151133 0.8085801204892458 0.9083151999466839 0.7930430160682421 1.0971295824408935 0.8626710259259452 1.0 20.113826038673658 -7.240672351251067 24.9672578878956 0.9849252353104472 0.8136231053212368 0.5260183646144352 0.07672454678795307 592.1636771631564 711932.9104562408 0.03474839624828249 0.020033295984349376 5.7454976155718e-08 7.240672351251067 -0.17130212998921035 S(ph)SVQDFICVSYLEPEQQAR ddPTM_KYSE-520_SHP099_60min_R1 4 SSVQDFICVSYLEPEQQAR 19 0 A0A087WWY9;Q8TB24 A0A087WWY9 RIN3 Ras and Rab interactor 3 1 S(0.5)S(0.5)VQDFICVSYLEPEQQAR;S(0.5)S(0.5)VQDFICVSYLEPEQQAR;S(0.5)S(0.5)VQDFICVSYLEPEQQAR;S(0.5)S(0.5)VQDFICVSYLEPEQQAR 241.8 3.8274000000000004e-26 348526000.0 244224.0 230115.0 193245.0 189191.0 198126.0 206648.0 182450.0 208103.0 270853.0 198378.0 True False 230676.40787152626 219059.92999034317 205701.8819029321 207171.65575765172 213717.38901726424 205358.2331798165 200893.82654040595 207381.13926460527 221672.9228484936 196620.52525574874 1.1732061419909252 1.1141254439505082 1.0461872260557286 1.0536624062425777 1.0869536063911802 1.0444394496083378 1.0217337497145775 1.0547278265830078 1.127414966266409 1.0 17.585054407198943 -4.490224048898803 2.591242219653783 1.0558671558086923 1.1752405057769484 0.5705004048023039 0.03282196121401053 0.2377524071835739 2.753353019405547 0.008585824747599651 0.04906729155405152 3.234267607164573e-05 4.490224048898803 0.1193733499682561 S(ph)SVTVEER ddPTM_KYSE-520_SHP099_60min_R1 1 SSVTVEER 8 0 Q9BQ89;V9GZ26 Q9BQ89 FAM110A Protein FAM110A 1 S(0.985)S(0.015)VTVEER 144.47 0.00053569 144300000.0 114400.0 110710.0 125620.0 108160.0 94414.0 100680.0 103790.0 102410.0 131400.0 100590.0 True False 108054.0039492539 105391.32542090201 133717.66619910664 118439.49388051026 101843.84465782363 100051.61877465037 114282.10609278549 102054.76361267376 107541.07232444205 99698.8508578357 1.0838039056571689 1.0570966918283082 1.3412157216313318 1.1879725078215548 1.0215147294229756 1.0035383348331437 1.146273052391994 1.0236302899638978 1.0786590958584754 1.0 16.605289255574565 -5.75794301892647 24.99958381913517 1.0497144039064783 1.1720413671573389 0.3493109775830171 0.08130967009175462 111.45116862364094 796889.6218420928 0.025661005187878845 0.03179013694252321 1.7460512263968997e-06 5.75794301892647 0.12232696325086057 S(ph)T(ph)SPAGQHHS(ph)PISSR ddPTM_KYSE-520_SHP099_60min_R1 1 STSPAGQHHSPISSR 15 0 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 3 S(0.866)T(0.567)S(0.567)PAGQHHS(0.907)PIS(0.077)S(0.015)R 83.723 0.02368 0.0 124900.0 142980.0 139220.0 192070.0 121670.0 129900.0 120070.0 129120.0 150610.0 108530.0 True False 117971.54801802288 136111.02618264465 148194.34395987607 210324.27505204882 131244.73679239754 129089.24591604143 132207.84737027434 128672.11285683457 123263.02056913401 107568.50863506238 1.0967108265696415 1.265342690995334 1.3776740594465353 1.9552588180393606 1.2201037130454164 1.2000654053315032 1.2290571752631019 1.1961875691088033 1.14590247771601 1.0 16.714896255995896 -5.972965478416006 24.990182070745327 1.175502441362486 1.4314585938852848 0.26306396967659673 0.21271732414701708 332.0235137389469 306914.55009113677 0.06963964370104543 0.0789621271374721 1.0642276091279608e-06 5.972965478416006 0.2559561525227989 S(ph)T(ph)TKSPGPSRR ddPTM_KYSE-520_SHP099_60min_R1 1 STTKSPGPSRR 11 2 Q5VZY9;O15075-2;O15075 Q5VZY9 DCLK1 Serine/threonine-protein kinase DCLK1 2 S(0.925)T(0.603)T(0.468)KS(0.002)PGPS(0.001)RR 68.355 0.033934 636860000.0 171550.0 872760.0 579380.0 322160.0 739440.0 394510.0 492370.0 629560.0 1016100.0 241420.0 True False 162033.7795235533 830831.2995605316 616727.7618407772 352777.9895390643 797629.7211619159 392047.71675394604 542143.564668127 627376.2033004087 831601.8537965416 239281.2066219179 0.6771688500366797 3.472196213358732 2.5774183043771295 1.4743238489952943 3.3334407345338666 1.6384392334388826 2.265717280190559 2.62192009208525 3.47541650068045 1.0 17.868347565094762 -7.2468901239918715 20.07702731981977 2.536500936557308 2.2619971555037943 0.0 0.9737918684211733 349.5761312726334 482399.9319832534 0.438506692303442 0.25049500285442455 5.663825650555282e-08 7.2468901239918715 -0.2745037810535136 S(ph)TAALEEDAQILK ddPTM_KYSE-520_SHP099_60min_R1 1 STAALEEDAQILK 13 0 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E9PDQ5;Q15052-2;Q15052 B1ALK7;Q15052-2 ARHGEF7;ARHGEF6 Rho guanine nucleotide exchange factor 7;Rho guanine nucleotide exchange factor 6 1 S(0.986)T(0.014)AALEEDAQILK 242.92 6.2211e-16 279380000.0 392780.0 573160.0 460450.0 411130.0 480560.0 388580.0 454470.0 533590.0 581190.0 538760.0 True False 370991.71041248227 545624.5332693001 490131.343746048 450203.671589258 518377.337987626 386154.7280835675 500412.2627997721 531739.1008308422 475660.54660762876 533987.0055489377 0.6947579370983071 1.0217936534024814 0.9178712939693988 0.8430985527942753 0.9707677014625758 0.723153792266164 0.9371244198823699 0.9957903381641569 0.8907717634788707 1.0 19.026445109124534 -6.981255976897388 24.99956298496636 0.9592601861437783 0.8720057614855827 0.1792184596084313 0.09817746972049132 453.7065974153795 605123.184998818 0.03966907901596589 0.02674023795571216 1.0441046335850061e-07 6.981255976897388 -0.08725442465819555 S(ph)TDKEAQGQQFHHHR ddPTM_KYSE-520_SHP099_60min_R1 7 STDKEAQGQQFHHHR 15 1 A6ND36 A6ND36 FAM83G Protein FAM83G 1 S(0.881)T(0.119)DKEAQGQQFHHHR;S(0.5)T(0.5)DKEAQGQQFHHHR;S(0.5)T(0.5)DKEAQGQQFHHHR;S(0.768)T(0.232)DKEAQGQQFHHHR;S(0.5)T(0.5)DKEAQGQQFHHHR;S(0.5)T(0.5)DKEAQGQQFHHHR;S(0.863)T(0.137)DKEAQGQQFHHHR 190.83 2.8579e-11 2467160000.0 1498718.0 1422579.0 1611202.0 1857994.0 1646380.0 1280154.0 1428047.0 1355959.0 1645318.0 866344.0 True False 1415581.124919736 1354236.169505388 1715062.6589343494 2034577.1911337357 1775940.7393791992 1272164.0840369842 1572407.9271556418 1351255.4947122103 1346569.7262915238 858668.8661654321 1.6485762797495076 1.5771343562891906 1.997350464787812 2.3694549450937608 2.068248668791311 1.4815537562437808 1.8312157213496778 1.573663082424926 1.5682060679629812 1.0 19.71174235755465 -8.108576582564105 0.6633143886191885 0.9999224190536035 1.8991474682928513 0.539499866450186 0.24248685354862037 0.7724173393332152 0.7671549902269124 0.277050657988584 0.11056858842581796 7.787954713096617e-09 8.108576582564105 0.8992250492392478 S(ph)TEDLSPQK ddPTM_KYSE-520_SHP099_60min_R1 1 STEDLSPQK 9 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 S(0.979)T(0.021)EDLSPQK 111.5 0.00092221 348940000.0 495710.0 570290.0 480600.0 617760.0 577640.0 656230.0 507240.0 661230.0 794700.0 555890.0 True False 468211.9781266142 542892.4123772581 511580.2449871881 676471.7246636827 623096.9816779847 652134.2251538418 558516.7693853407 658936.3474622421 650402.5127567287 550965.2470758753 0.849803105752213 0.9853478332046132 0.9285163587037217 1.2277938186735098 1.1309188464879272 1.1836213420263768 1.0137059866289997 1.19596717026963 1.1804782900710968 1.0 19.071601796041744 -5.2449763250320425 24.154271334031392 1.138402900889486 0.927634919554986 0.6134535537809538 0.07698667221539918 339.91185350145946 498710.54408377036 0.020062742261476134 0.034607807407472206 5.688839419263242e-06 5.2449763250320425 -0.21076798133450003 S(ph)TELLLGVK ddPTM_KYSE-520_SHP099_60min_R1 6 STELLLGVK 9 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 S(0.993)T(0.007)ELLLGVK;S(0.987)T(0.013)ELLLGVK;S(0.993)T(0.007)ELLLGVK;S(0.993)T(0.007)ELLLGVK;S(0.989)T(0.011)ELLLGVK;S(0.993)T(0.007)ELLLGVK 179.72 2.7588e-05 3548710000.0 4209760.0 3743920.0 3224850.0 3580840.0 3994610.0 4083980.0 3863000.0 4197960.0 4110490.0 3969600.0 True False 3976236.2208514917 3564056.463461511 3432728.9909424316 3921161.956981201 4308963.08077816 4058490.365944535 4253509.739246853 4183398.256571233 3364128.6330205114 3934432.432302071 1.0106251128386925 0.9058629229975492 0.8724839096890811 0.9966270928401469 1.0951930564116839 1.0315313417569296 1.0810986876595279 1.0632787139067705 0.8550480128723752 1.0 21.90772410183942 -5.5089048820503494 22.772238233016605 1.029371743254057 0.928490765713818 0.24664348407559744 0.0705753278494828 254.60607042458957 414913.4197742337 0.020280293881681687 0.028690389485182405 3.098097761529646e-06 5.5089048820503494 -0.10088097754023906 S(ph)TENVNKLPELSSFGK ddPTM_KYSE-520_SHP099_60min_R1 5 STENVNKLPELSSFGK 16 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(0.926)T(0.074)ENVNKLPELSSFGK;S(0.964)T(0.036)ENVNKLPELSSFGK;S(0.5)T(0.5)ENVNKLPELSSFGK;S(0.985)T(0.015)ENVNKLPELSSFGK;S(0.983)T(0.017)ENVNKLPELSSFGK 200.74 9.7401e-13 1341740000.0 2158250.0 1741582.0 1650996.0 1908068.0 1979761.0 1849846.0 1925497.0 2095822.0 2211303.0 1993213.0 True False 2038527.5701352903 1657913.7865521228 1757421.8438469982 2089410.209038439 2135556.927400783 1838300.4249484672 2120145.027799792 2088552.0826505304 1809786.117612296 1975554.683516249 1.0318760534165305 0.8392143231394821 0.8895840031717063 1.0576321812158298 1.080991047840675 0.9305236854676754 1.0731897453864399 1.0571978088367362 0.9160901152030351 1.0 20.913826350109936 -5.256675669107223 24.96076555284833 1.0203656687802247 0.912123741832908 0.2823192301383842 0.06981074106010797 456.881303421082 2393946.173378459 0.01875531884932045 0.031196607580074903 5.5376350513166534e-06 5.256675669107223 -0.10824192694731671 S(ph)TENVNKLPELSSFGKPSSSVQGTGLIR ddPTM_KYSE-520_SHP099_60min_R1 1 STENVNKLPELSSFGKPSSSVQGTGLIR 28 2 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 S(0.995)T(0.005)ENVNKLPELSSFGKPSSSVQGTGLIR 214.99 1.6843000000000002e-22 3868100000.0 670010.0 668520.0 731710.0 708440.0 631400.0 517580.0 550380.0 709590.0 818130.0 571190.0 True False 632843.2096681779 636403.2957310223 778877.1973773948 775769.9245997468 681087.587825428 514349.5912334472 606017.7815911676 707128.5979095506 669578.2153789627 566129.7009790953 1.1178413861235414 1.1241298498036616 1.3757928545885554 1.3703042310941969 1.2030592753701463 0.9085366663220517 1.0704574950635652 1.249057586426934 1.182729353752255 1.0 19.110773088488873 -6.014288972456191 24.579227668509557 1.09241412254725 1.2523432079858834 0.30744625943091075 0.11798788994194372 771.0887236192542 1326392.026065605 0.041957161003135235 0.04357270542805235 9.676337942856797e-07 6.014288972456191 0.1599290854386335 S(ph)TEPELIQVK ddPTM_KYSE-520_SHP099_60min_R1 1 STEPELIQVK 10 0 M0QXM4;Q15758-3;Q15758-2;Q15758 M0QXM4 SLC1A5 Amino acid transporter;Neutral amino acid transporter B(0) 1 S(0.993)T(0.007)EPELIQVK 209.19 6.463099999999999e-06 0.0 137620.0 156060.0 128220.0 236010.0 215010.0 210400.0 201570.0 282260.0 352550.0 186210.0 True False 129985.94426133139 148562.64334916434 136485.26635925355 258440.31944100594 231930.063760445 209086.81555608255 221946.66273362382 281280.90593997913 288535.8070622678 184560.3242691876 0.7043005845164337 0.8049543905898247 0.7395157485754363 1.4003026948742343 1.2566626368848755 1.1328914618242771 1.2025697484682945 1.524059448062744 1.5633685528284418 1.0 17.493732918361946 -5.256467965031009 24.94899579449584 1.306489460201701 0.7551266124894094 0.7036979673443935 0.16272319619057313 229.64189030778897 1152452.0212234587 0.04664489988998895 0.07764556808769082 5.540284093630571e-06 5.256467965031009 -0.5513628477122916 S(ph)TEPSVTPDLLNFK ddPTM_KYSE-520_SHP099_60min_R1 8 STEPSVTPDLLNFK 14 0 A0A494BZV2;Q6WCQ1-2;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.654)T(0.292)EPS(0.051)VT(0.002)PDLLNFK;S(0.972)T(0.028)EPSVTPDLLNFK;S(0.918)T(0.082)EPSVTPDLLNFK;S(0.994)T(0.006)EPSVTPDLLNFK;S(0.913)T(0.087)EPSVTPDLLNFK;S(0.991)T(0.009)EPSVTPDLLNFK;S(0.5)T(0.5)EPSVTPDLLNFK;S(0.993)T(0.007)EPSVTPDLLNFK 344.3 3.5525e-54 2850911000.0 3527560.0 3688910.0 3113100.0 2845540.0 3087280.0 3436400.0 3133760.0 3584420.0 4111960.0 3456180.0 True False 3331879.214783481 3511689.2264332017 3313775.4071361125 3115979.2660572007 3330231.3717796747 3414952.1529321424 3450551.0433503017 3571986.4836299163 3365331.7180762026 3425560.934067351 0.9726521521330416 1.0251428288749154 0.9673672344229739 0.9096259929486739 0.9721711088716538 0.9969030528607143 1.007295187493068 1.0427449846553178 0.9824177070119623 1.0 21.70790881740782 -6.417016051197282 3.038778397172551 1.0110483293106511 0.9691313837630608 0.28159295547802843 0.029430121748889586 0.372152938224158 6.587348938602855 0.012349162662844245 0.010463310328381428 3.8281059466381544e-07 6.417016051197282 -0.04191694554759029 S(ph)TGDIAGTVVPETNKEPR ddPTM_KYSE-520_SHP099_60min_R1 5 STGDIAGTVVPETNKEPR 18 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;A0A3B3IT83;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(0.978)T(0.022)GDIAGTVVPETNKEPR;S(0.973)T(0.026)GDIAGT(0.001)VVPETNKEPR;S(0.985)T(0.015)GDIAGTVVPETNKEPR;S(0.977)T(0.023)GDIAGTVVPETNKEPR;S(0.967)T(0.033)GDIAGTVVPETNKEPR 222.24 1.2147e-18 6272940000.0 3465410.0 3610000.0 3361050.0 3645560.0 3830440.0 3620010.0 3362360.0 3575170.0 4540950.0 3585960.0 True False 3273176.7991764313 3436570.18127953 3577708.660870136 3992032.9263224164 4131873.835777687 3597416.174815471 3702260.162271301 3562768.5697209504 3716427.948034057 3554191.184234661 0.9209343643907716 0.9669063939281423 1.0066168293759188 1.1231902616915745 1.1625356154461963 1.0121616954013457 1.0416603863892944 1.0024133157282973 1.0456466057647742 1.0 21.761089857086024 -4.8147784756147365 2.6854174987960038 1.0576209744804603 0.9349242243358892 0.43894136208315204 0.05024750259504822 0.2652530834104514 3.801417850481791 0.014956544090143345 0.043280633638759204 1.5318686360696927e-05 4.8147784756147365 -0.12269675014457115 S(ph)TGGAPTFNVTVTK ddPTM_KYSE-520_SHP099_60min_R1 1 STGGAPTFNVTVTK 14 0 P07737;K7EJ44 P07737 PFN1 Profilin-1 1 S(0.991)T(0.009)GGAPTFNVTVTK 203.99 2.0188e-11 425920000.0 413520.0 383690.0 315680.0 285980.0 326600.0 344980.0 292860.0 401950.0 441800.0 432470.0 True False 390581.2212683173 365256.95646956866 336029.2379058584 313159.45321697753 352301.5619001975 342826.8518561661 322465.1468381653 400555.72926583537 361580.2568716777 428638.6522565686 0.9112132543626248 0.8521325702819217 0.7839452558392299 0.7305907938268033 0.8219080571607474 0.799803867549867 0.7523006736339507 0.934483456303134 0.843554949998415 1.0 18.70940242455528 -8.079022554613083 0.9896992386777461 0.9957245906481876 0.8081352318313583 0.467106492932463 0.058588871087744694 0.5725049639160434 1.2375924103739622 0.05752692443706964 0.01919668888164382 8.336378894153905e-09 8.079022554613083 -0.18758935881682937 S(ph)TMVGTPYWMAPEVVTR ddPTM_KYSE-520_SHP099_60min_R1 1 STMVGTPYWMAPEVVTR 17 0 Q13177;H7C1X3;H0YCG5;A0A087X294;O75914-2;O75914;O75914-4;O75914-3;E9PM17;B3KNX7;Q13153;Q13153-2 Q13177;E9PM17 PAK2;PAK1;PAK3 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34;Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 3;Serine/threonine-protein kinase PAK 1 1 S(0.905)T(0.095)MVGTPYWMAPEVVTR 199.33 4.4482e-10 0.0 41934.0 50652.0 39793.0 31338.0 48856.0 43137.0 40205.0 48956.0 61712.0 52663.0 True False 39607.83742664347 48218.601889797996 42358.12045105118 34316.354097886724 52700.68924738534 42867.76598214233 44269.31376298724 48786.1830624163 50506.65643292211 52196.44679119401 0.7588224843175657 0.9237908871975724 0.8115134852090614 0.657446171291418 1.0096604747485685 0.8212774741857427 0.848128876283124 0.9346648299180194 0.9676263335504097 1.0 15.671663979999792 -7.408716411187127 0.7438629293790466 1.007034801107877 0.8202268521459875 0.34792102961026794 0.08723954488392821 0.7663987617540826 0.8346993780226977 0.08191363009472961 0.03656359509607945 3.901966970223388e-08 7.408716411187127 -0.18680794896188946 S(ph)TNTAVSR ddPTM_KYSE-520_SHP099_60min_R1 3 STNTAVSR 8 0 Q9NWB6;Q9NWB6-2 Q9NWB6 ARGLU1 Arginine and glutamate-rich protein 1 1 S(0.992)T(0.008)NTAVSR;S(0.987)T(0.013)NTAVSR;S(0.977)T(0.016)NT(0.007)AVSR 152.7 0.00012693 1911740000.0 1978805.0 1574742.0 1638304.0 1829057.0 1823698.0 1920177.0 2277830.0 1574023.0 1915676.0 1834289.0 True False 1869036.7420000306 1499089.0305840678 1743911.6972190803 2002890.0273539599 1967212.6571777917 1908192.4630895085 2508095.2858785046 1568563.0815927286 1567837.5286620844 1818038.6265152495 1.028051172698422 0.8245639056951541 0.9592269777907563 1.1016762780189258 1.082052178917933 1.0495885154800382 1.3795610551388178 0.8627776432887422 0.8623785577467397 1.0 20.793951421050917 -3.8912972145763702 20.076905530895505 1.019205125023036 2.375644174623547 0.0 0.15246190953419567 11821.72328803642 4952745.833174267 0.03884268314007864 934084.3703610424 0.00012844073596975092 3.8912972145763702 1.356439049600511 S(ph)TPAPKEEEKVNEEQWSLR ddPTM_KYSE-520_SHP099_60min_R1 2 STPAPKEEEKVNEEQWSLR 19 2 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 S(0.982)T(0.018)PAPKEEEKVNEEQWSLR;S(0.56)T(0.44)PAPKEEEKVNEEQWSLR 190.24 5.2065e-13 1992720000.0 438580.0 612940.0 600450.0 537790.0 498560.0 691090.0 618090.0 731530.0 1166450.0 675860.0 True False 414251.0931124458 583493.4423583028 639155.9677539689 588901.3999075412 537793.8355816365 686776.6509631807 680572.5691770868 728992.4931703856 954652.0838116088 669872.4062111229 0.6184029813311742 0.8710516166184696 0.9541458370693462 0.8791247324821705 0.8028302563221879 1.0252350217673096 1.0159734344432625 1.0882557430506101 1.425125255138114 1.0 19.35352679917656 -6.775028277719713 1.1210850066606046 1.1979510624793759 0.830941576570798 0.5556183608901004 0.13282553222830307 0.38371942985274227 0.9565935539284298 0.09169691692637048 0.05145229237406946 1.6786947116359033e-07 6.775028277719713 -0.36700948590857785 S(ph)TPKEDDSSASTSQSTR ddPTM_KYSE-520_SHP099_60min_R1 2 STPKEDDSSASTSQSTR 17 1 E7EX17;P23588-2;P23588;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.5)T(0.5)PKEDDSSASTSQSTR;S(0.561)T(0.439)PKEDDSSASTSQSTR 114.55 9.1037e-05 631780700.0 567512.0 558938.0 562820.2 375866.6 427293.9 479886.0 451502.0 512080.5 632681.0 475154.0 True False 536030.9780528754 532085.7794969574 599100.4906361594 411588.8486555857 460919.49896027794 476890.853469327 497144.228394883 510304.21226598707 517802.0789901094 470944.5052242186 1.1382041240669512 1.1298269192962114 1.2721254500058883 0.8739646478296346 0.9787129775318905 1.0126264308833528 1.0556322939964882 1.0835761042015537 1.0994970176870027 1.0 18.84519754116495 -5.25058703120955 24.99962677143108 1.0184406730457263 1.1750296318099274 0.5442557230289173 0.06917259015940336 623.6140459609857 1436564.1275263282 0.02011064934361494 0.03439216387314876 5.615817279166739e-06 5.25058703120955 0.1565889587642011 S(ph)TPPPNNLVNPVQELETER ddPTM_KYSE-520_SHP099_60min_R1 8 STPPPNNLVNPVQELETER 19 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.5)T(0.5)PPPNNLVNPVQELETER;S(0.5)T(0.5)PPPNNLVNPVQELETER;S(0.5)T(0.5)PPPNNLVNPVQELETER;S(0.5)T(0.5)PPPNNLVNPVQELETER;S(0.5)T(0.5)PPPNNLVNPVQELETER;S(0.5)T(0.5)PPPNNLVNPVQELETER;S(0.5)T(0.5)PPPNNLVNPVQELETER;S(0.5)T(0.5)PPPNNLVNPVQELETER 97.417 0.00069281 2852790000.0 634931.0 688554.0 606213.0 434764.0 499909.0 697641.0 545641.0 642676.0 779432.0 687624.0 True False 599710.1117264315 655474.8322993746 645290.4599550944 476083.8398434366 539248.9942068757 693286.7637422107 600799.7172229849 640446.7069577056 637906.796681769 681532.1863233761 0.8799439318657192 0.9617665100094954 0.9468231624337612 0.6985493119726885 0.7912304143930932 1.017247281426643 0.8815426905427398 0.9397160102044305 0.935989245237337 1.0 19.378422266394107 -6.259855675237431 24.997746792225254 0.9465465225080893 0.8578932784570297 0.28356407605820344 0.07826770072145733 242.9581833293733 3834959.176778772 0.02913996188066102 0.027686202107427157 5.49723527654644e-07 6.259855675237431 -0.08865324405105968 S(ph)TPPPNNLVNPVQELETERR ddPTM_KYSE-520_SHP099_60min_R1 4 STPPPNNLVNPVQELETERR 20 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.789)T(0.211)PPPNNLVNPVQELETERR;S(0.5)T(0.5)PPPNNLVNPVQELETERR;S(0.5)T(0.5)PPPNNLVNPVQELETERR;S(0.536)T(0.464)PPPNNLVNPVQELETERR 98.74 0.00063319 1672800000.0 274039.0 277828.0 253346.0 221106.0 218044.0 247256.0 220159.0 236750.0 302073.0 220267.0 True False 258837.51038679725 264480.7258516703 269677.0885279324 242119.8477620568 235202.82229934682 245712.78358904365 242414.82026478057 235928.76950786536 247224.1578406483 218315.60574513304 1.185611580552654 1.2114604677433438 1.235262534748707 1.109035915850713 1.0773523106448393 1.12549344674835 1.1103870446521424 1.08067752968285 1.1324163336690818 1.0 17.736055735898834 -1.0000000000752947 0.10497928162830031 0.953206548560182 1.7472819902080403 0.6781651625724653 0.037484690712806454 73.30006847685898 0.5424675123318524 0.4371132949522789 8.403997673531803 0.09999999998266276 1.0000000000752947 0.7940754416478583 S(ph)TPPYLFPEYPEASK ddPTM_KYSE-520_SHP099_60min_R1 4 STPPYLFPEYPEASK 15 0 Q8TE76-2;Q8TE76-3;Q8TE76 Q8TE76-2 MORC4 MORC family CW-type zinc finger protein 4 1 S(0.5)T(0.5)PPYLFPEYPEASK;S(0.5)T(0.5)PPYLFPEYPEASK;S(0.497)T(0.497)PPY(0.007)LFPEYPEASK;S(0.5)T(0.5)PPYLFPEYPEASK 124.09 9.4879e-05 1007877000.0 731360.0 719690.0 539994.0 591840.0 568660.0 666950.0 607290.0 738360.0 825710.0 625690.0 True False 690790.0028699853 685115.0121232868 574802.8772609481 648088.2956568154 613410.3067671958 662787.3176574584 668680.7997792452 735798.80149452 675781.878455214 620146.8733794534 1.113913546166195 1.104762503098328 0.9268818435358611 1.0450561366617828 0.9891371433100241 1.068758621720752 1.0782619867698582 1.1864911895545458 1.0897126269017223 1.0 19.24225041316559 -6.6928335473417 2.8664458178818597 1.1061419987181664 1.0342671981051694 0.10251882774212884 0.06615755888531494 0.45966474600543217 7.6637198710872605 0.02920949577864617 0.020769957435790583 2.0284600212848537e-07 6.6928335473417 -0.071874800612997 S(ph)TPVIVSATTK ddPTM_KYSE-520_SHP099_60min_R1 5 STPVIVSATTK 11 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(0.594)T(0.406)PVIVSATTK;S(0.611)T(0.389)PVIVSATTK;S(0.605)T(0.395)PVIVSATTK;S(0.636)T(0.364)PVIVSATTK;S(0.63)T(0.37)PVIVSATTK 142.76 8.5528e-05 4983630000.0 8713500.0 8860200.0 7262100.0 6289640.0 6695870.0 7995500.0 7008400.0 8366900.0 9769600.0 8319500.0 True False 8230144.785068392 8434542.692568664 7730226.585770825 6887405.494550778 7222796.874711182 7945597.118719874 7716877.467392599 8337877.17674915 7995686.911574341 8245795.702473057 0.9981019518346821 1.022890088101382 0.9374749102081678 0.8352626893830422 0.8759369180763161 0.9635937398178385 0.9358560102426712 1.011167081698189 0.9696683255414994 1.0 22.97522728683439 -7.249202838157568 23.343521980605285 0.9928132754429313 0.9362502727770451 0.19144406800705305 0.05180907426575054 570.874161637263 1089055.170491387 0.028206260615009818 0.016100024478260113 5.633744691308054e-08 7.249202838157568 -0.05656300266588621 S(ph)TPVRPK ddPTM_KYSE-520_SHP099_60min_R1 1 STPVRPK 7 1 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 S(0.5)T(0.5)PVRPK 65.305 0.022596 441410000.0 270280.0 236300.0 181920.0 234120.0 234530.0 230220.0 249250.0 226870.0 288600.0 210990.0 True False 255287.02961017776 224947.79330646878 193646.85428229175 256370.69440925555 252986.17670683816 228783.11158422724 274446.62244558067 226083.0409218563 236197.51501395684 209120.7927477359 1.2207634939397565 1.0756835336686252 0.9260047828715412 1.225945498009457 1.2097609873352835 1.09402373899859 1.3123832347778437 1.0811122029103155 1.1294788620033773 1.0 17.673976989748688 -4.238934902583367 22.303618596922977 1.1253877859856178 1.2207639459472253 0.07409565961581821 0.10635081190732915 4106.210126754869 4069279.621776663 0.026891426462905054 1.0997045725722336 5.768529227473709e-05 4.238934902583367 0.09537615996160742 S(ph)TQLLQAAAAEASLNK ddPTM_KYSE-520_SHP099_60min_R1 1 STQLLQAAAAEASLNK 16 0 Q2M2I8;Q2M2I8-2 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 S(0.869)T(0.131)QLLQAAAAEASLNK 162.92 6.0335e-06 0.0 111920.0 136800.0 177840.0 123160.0 131170.0 106360.0 212660.0 280650.0 194950.0 136640.0 True False 105711.57449301121 130227.92265901355 189303.85095406085 134865.08937059576 141492.3327447915 105696.1677877612 234157.74816159377 279676.4906542021 159551.99428957337 135429.47590431134 0.7805654846342496 0.9615921629278623 1.3978039100425583 0.9958326167184287 1.044767631270787 0.7804517228025128 1.7290013610260118 2.0651079743660055 1.1781186719079233 1.0 17.047182246680116 -6.766683496089903 24.999329182312824 1.5818160615192818 1.0128653033775235 0.3572544080948201 0.3188746416563334 127.82764462513491 609361.6180790915 0.1287363514467809 0.08971002814852592 1.7112619894571178e-07 6.766683496089903 -0.5689507581417583 S(ph)TS(ph)PAGQHHS(ph)PISSR ddPTM_KYSE-520_SHP099_60min_R1 2 STSPAGQHHSPISSR 15 0 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 3 S(0.779)T(0.408)S(0.813)PAGQHHS(0.767)PIS(0.126)S(0.107)R;S(0.968)T(0.19)S(0.842)PAGQHHS(0.997)PIS(0.002)S(0.001)R 95.195 0.00089875 1052400000.0 473630.0 517450.0 518900.0 788820.0 493590.0 431460.0 459370.0 456930.0 548260.0 493080.0 True False 447356.79974200274 492590.92529171513 552349.1242693553 863789.2156326188 532432.7248570683 428767.098098039 505807.6026191633 455345.01647826395 448709.80450988206 488711.69481043535 0.9153797719441242 1.0079376665679844 1.1302146646676914 1.7674821879752047 1.0894618043949034 0.8773415955686347 1.034981581145422 0.9317252304651439 0.9181482851232576 1.0 18.89862410294844 -6.000819605557362 24.99996385165973 0.9566722034826487 1.2161336482296488 0.23528717516261377 0.21484301026083166 48.7053178660016 1485706.4313706318 0.07223707109775762 0.0809245107484539 9.981145681254677e-07 6.000819605557362 0.25946144474700006 S(ph)TSATDTHHVEMAR ddPTM_KYSE-520_SHP099_60min_R1 5 STSATDTHHVEMAR 14 0 H3BQP2;H3BNP3;H3BTL2;H3BS02;O14874-2;O14874-3;O14874 H3BQP2 BCKDK [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial 1 S(0.987)T(0.013)SATDTHHVEMAR;S(0.958)T(0.04)S(0.002)ATDTHHVEMAR;S(0.925)T(0.031)S(0.021)AT(0.021)DTHHVEMAR;S(0.961)T(0.035)S(0.003)AT(0.001)DTHHVEMAR;S(0.821)T(0.053)S(0.063)AT(0.063)DT(0.001)HHVEMAR 239.55 1.3835e-18 3048490000.0 678543.0 723851.0 676023.0 978510.0 694410.0 737712.0 746348.0 613848.0 860969.0 712384.0 True False 640902.8671480642 689076.1114374984 719600.5242550446 1071507.296200242 749056.1163475686 733107.6657676282 821796.1394945402 611718.7045611996 704638.7328622722 706072.8319863661 0.9077007896551382 0.9759278083238927 1.019159060731202 1.517559163388023 1.0608765589242108 1.0382890157453109 1.1638971254319677 0.8663677128608337 0.9979689076549519 1.0 19.429457480774783 -7.256497247911144 24.52212530373799 0.9491262328216222 1.1023861604756453 0.14332253505025516 0.15957045701870357 624.9713615003409 3101037.8344467245 0.08256148932110674 0.04572260900015428 5.5399105452378574e-08 7.256497247911144 0.15325992765402308 S(ph)TSDLDKDDASYLR ddPTM_KYSE-520_SHP099_60min_R1 2 STSDLDKDDASYLR 14 1 H0Y966;Q8TEP8 H0Y966 CEP192 Centrosomal protein of 192 kDa 1 S(0.95)T(0.046)S(0.004)DLDKDDASYLR;S(0.959)T(0.039)S(0.002)DLDKDDASYLR 112.28 0.00064671 209500000.0 463030.0 364140.0 324830.0 344170.0 351040.0 339690.0 328000.0 374570.0 448990.0 343830.0 True False 437344.8028725794 346646.16781471675 345769.06154637644 376879.8133215168 378664.85085561976 337569.8687083923 361157.4409715164 373270.7040952956 367464.73411682784 340783.93369569234 1.2833492416432766 1.0172022021562177 1.0146284121925055 1.105920133130621 1.111158166258371 0.9905686135128363 1.059784236465845 1.0953295246266297 1.0782924245629504 1.0 18.378497795552427 -4.25540132872651 24.887756608072156 1.0561262558329652 1.2833493477977744 0.7239830645764715 0.042702078946281204 347.8904468633452 1433899.1708918249 0.01091140223069502 0.09593749028163073 5.5539078701951624e-05 4.25540132872651 0.22722309196480928 S(ph)TSEGAWPQLPSGLSMMR ddPTM_KYSE-520_SHP099_60min_R1 3 STSEGAWPQLPSGLSMMR 18 0 G3V1A6;P57764 G3V1A6 GSDMD Gasdermin-D 1 S(0.333)T(0.333)S(0.333)EGAWPQLPSGLSMMR;S(0.333)T(0.333)S(0.333)EGAWPQLPSGLSMMR;S(0.333)T(0.333)S(0.333)EGAWPQLPSGLSMMR 82.70700000000001 0.0016760000000000002 533030000.0 494451.0 514468.0 549210.0 294335.0 302776.0 414372.0 295808.0 351821.0 435902.0 393410.0 True False 467022.817366368 489752.18504778825 584612.9553670703 322308.5099049554 326602.7486402147 411785.7506445107 325711.15944787307 350600.61506663886 356753.1849951975 389924.6934683487 1.1977256767511637 1.2560173624590996 1.4992970826417409 0.826591686302417 0.8376046813940137 1.0560648185210064 0.835318113738062 0.8991495561567918 0.914928423285806 1.0 18.572835996231237 -5.2709753595031845 24.999472659789554 0.9057128655189661 1.311513777114669 0.7793570646060305 0.09938223962105167 286.79562506547717 751861.4149941859 0.027870192689216113 0.041941480071857544 5.3582705778532e-06 5.2709753595031845 0.40580091159570286 S(ph)TSFRGGMGSGGLATGIAGGLAGMGGIQNEK ddPTM_KYSE-520_SHP099_60min_R1 3 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.333)T(0.333)S(0.333)FRGGMGSGGLATGIAGGLAGMGGIQNEK;S(0.28)T(0.28)S(0.28)FRGGMGS(0.074)GGLAT(0.087)GIAGGLAGMGGIQNEK;S(0.333)T(0.333)S(0.333)FRGGMGS(0.001)GGLATGIAGGLAGMGGIQNEK 235.94 4.0662e-31 3154370000.0 572610.0 703340.0 665930.0 455290.0 575130.0 549370.0 424840.0 511570.0 898360.0 460660.0 True False 540846.1818302652 669550.4906651363 708856.9133256734 498560.62471207033 620389.4589579315 545941.1780515453 467786.9732388383 509795.48307133536 735240.4698126767 456578.91078805685 1.1845623375305765 1.4664507598686276 1.552539761642043 1.0919484297939932 1.3587781745922891 1.1957214079582625 1.024547919726376 1.116555037970165 1.6103250773095257 1.0 18.800504697985097 -5.267132602025884 24.943451830149584 1.203717947842182 1.4077109331185447 0.19217949048881822 0.18903723442259765 736.5371696801046 3226955.0685054506 0.05257168023564241 0.08040234397459912 5.405892410114109e-06 5.267132602025884 0.20399298527636267 S(ph)TSHDRVPQSVQIR ddPTM_KYSE-520_SHP099_60min_R1 1 STSHDRVPQSVQIR 14 1 Q5T5U3;A0A087WW76;A0A452Q6Z5;E7ESW5;Q5T5U3-3;A0A1B0GV73 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 S(0.91)T(0.068)S(0.021)HDRVPQSVQIR 68.845 0.015787 1207800000.0 338840.0 311640.0 323350.0 261960.0 242090.0 287170.0 260580.0 302830.0 386360.0 291460.0 True False 320043.8697392059 296668.34661882365 344193.65837829275 286856.59963885444 261141.1056963219 285377.6655096969 286921.9694157248 301779.5534110536 316206.7633430094 288877.89115244854 1.1078863407041084 1.026967987876455 1.1914849454389453 0.9930029553126051 0.9039843951176962 0.987883373044618 0.993229243924065 1.044661300340899 1.0946035436686938 1.0 18.140100268006144 -5.303532230868038 24.862611927455433 0.9992438385899399 1.1005986243013584 0.4070243581753171 0.058455321795588856 473.0793279672708 279428.6090803186 0.017316864910313624 0.025685251447825942 4.97127478380267e-06 5.303532230868038 0.10135478571141843 S(ph)TSLNERPK ddPTM_KYSE-520_SHP099_60min_R1 1 STSLNERPK 9 1 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4 P49815 TSC2 Tuberin 1 S(0.495)T(0.01)S(0.495)LNERPK 108.98 0.011040000000000001 0.0 877810.0 875980.0 862240.0 1051000.0 884280.0 929660.0 944610.0 945130.0 1042800.0 898050.0 True False 829116.1294291482 833896.6059272137 917821.370032778 1150886.7240053285 953867.8051350466 923857.6471001318 1040100.3973051949 941851.5646249995 853453.8068487684 890093.9756723265 0.9314927997382308 0.9368635545447159 1.031151086422653 1.2929946224341244 1.0716484227573262 1.037932704130822 1.1685287461018508 1.0581484543961532 0.9588356175583794 1.0 19.763598137570945 -4.887601491941972 4.442854138195088 1.0922622826613204 0.9354755042046452 0.3054639133481942 0.08810722758688647 0.23995121842267023 8.117266476231396 0.02386334075557566 0.053205713533825666 1.2953839389045603e-05 4.887601491941972 -0.1567867784566752 S(ph)TSPFGIPEEASEMLEAKPK ddPTM_KYSE-520_SHP099_60min_R1 2 STSPFGIPEEASEMLEAKPK 20 1 Q96D09 Q96D09 GPRASP2 G-protein coupled receptor-associated sorting protein 2 1 S(0.333)T(0.333)S(0.333)PFGIPEEASEMLEAKPK;S(0.333)T(0.333)S(0.333)PFGIPEEASEMLEAKPK 80.061 0.0040994 1465470000.0 474110.0 541180.0 417100.0 391780.0 439970.0 460500.0 381220.0 467990.0 577270.0 450320.0 True False 447810.1731851462 515180.9004722586 443986.933383596 429014.6534070473 474593.13591313484 457625.84868619795 419757.43794866285 466366.6519196872 472452.31979247084 446330.5151436584 1.0033151621753031 1.1542587454645348 0.9947492235450044 0.9612039483093875 1.0633221789919063 1.0253071057418155 0.9404632300651848 1.0448908064678928 1.0585256973532378 1.0 18.767752919927442 -4.808330468234983 24.99995197241926 1.0107347397305135 1.078788207648699 0.22291699163400647 0.050579224438038924 150.6096852226242 80296.88320780841 0.012959380918822986 0.02697726444940555 1.5547820991112474e-05 4.808330468234983 0.06805346791818545 S(ph)TSPIIGSPPVR ddPTM_KYSE-520_SHP099_60min_R1 1 STSPIIGSPPVR 12 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 S(0.633)T(0.313)S(0.055)PIIGSPPVR 103.44 0.0023979 739990000.0 1556400.0 1291200.0 1084600.0 905700.0 1081000.0 1278500.0 1155800.0 1407700.0 1559800.0 1393400.0 True False 1470063.3893935212 1229168.813869287 1154515.0514213564 991777.455691366 1166068.5499513568 1270520.407264505 1272639.5435209712 1402817.0172596502 1276579.6393581799 1381055.5600487946 1.0644491300129748 0.8900212630300397 0.8359656807583945 0.7181300190821615 0.8443313822292262 0.9199632831713271 0.9214977154691786 1.0157571192936559 0.9243506751553693 1.0 20.397339929900948 -6.745804555403611 2.0255740798888144 0.9751130804404495 0.8634011316194427 0.224430372640695 0.08376242806392951 0.5083410125799351 4.270970461521737 0.04494413789728978 0.0291201745831148 1.7955414886501048e-07 6.745804555403611 -0.11171194882100688 S(ph)TSPVTDPSIPIR ddPTM_KYSE-520_SHP099_60min_R1 1 STSPVTDPSIPIR 13 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.333)T(0.333)S(0.333)PVT(0.001)DPSIPIR 68.676 0.025172999999999997 1685700000.0 2364700.0 2624600.0 2201900.0 1540200.0 1811300.0 2505000.0 1899700.0 2579900.0 2831300.0 2888700.0 True False 2233525.377087419 2498510.276395082 2343837.9971645665 1686580.1449219864 1953839.0051127588 2489365.3658174314 2091740.2152853366 2570950.9290531892 2317207.291264784 2863108.3653745893 0.7801050788363018 0.8726565527910761 0.8186340501498675 0.5890731085553326 0.682418810528372 0.869462503034439 0.7305836693371778 0.8979579537209811 0.8093327235840116 1.0 21.44915084505085 -8.144214439029023 0.7373347921197965 0.9973999227400316 0.7605331651093382 0.3929312337706887 0.08655601382070383 0.9614881470951397 1.1461624738303289 0.09201052202054337 0.03459240539269111 7.174399576966325e-09 8.144214439029023 -0.23686675763069343 S(ph)TSQSIVSLLTGTAGEDEK ddPTM_KYSE-520_SHP099_60min_R1 10 STSQSIVSLLTGTAGEDEK 19 0 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 S(0.454)T(0.454)S(0.091)QSIVSLLTGTAGEDEK;S(0.332)T(0.332)S(0.332)QS(0.004)IVSLLTGTAGEDEK;S(0.286)T(0.286)S(0.286)QS(0.141)IVSLLTGTAGEDEK;S(0.317)T(0.317)S(0.317)QS(0.05)IVSLLTGTAGEDEK;S(0.333)T(0.333)S(0.333)QSIVSLLTGTAGEDEK;S(0.473)T(0.473)S(0.049)QS(0.004)IVSLLTGTAGEDEK;S(0.333)T(0.333)S(0.333)QSIVSLLTGTAGEDEK;S(0.326)T(0.326)S(0.326)QS(0.021)IVSLLTGTAGEDEK;S(0.25)T(0.25)S(0.25)QS(0.25)IVSLLTGTAGEDEK;S(0.463)T(0.463)S(0.074)QSIVSLLTGTAGEDEK 274.82 1.4380999999999997e-35 2533533000.0 1754369.0 2199399.0 1726046.0 1510058.0 1590931.0 1952089.0 1546317.0 2035079.0 2300477.0 2191517.0 True False 1657050.6543221048 2093736.5706747936 1837309.6869312448 1653573.4583045065 1716128.218540854 1939905.2884603539 1702633.8129596112 2028019.7859400094 1882768.3671059024 2172101.8643544265 0.7628788877332874 0.9639219067182542 0.8458671838013979 0.761278043834269 0.7900772273637853 0.8931005125935546 0.7838646248138337 0.9336669790773188 0.8667956130434439 1.0 21.0506603316529 -8.15372360975178 0.8374190221456683 0.9982179009297266 0.8329374055537848 0.37428435928368253 0.06476351928484762 0.8929630950587 1.3472161650545014 0.06286893471929855 0.022281667202267274 7.019018551171891e-09 8.15372360975178 -0.1652804953759418 S(ph)TSRDRLDDIIVLTK ddPTM_KYSE-520_SHP099_60min_R1 1 STSRDRLDDIIVLTK 15 2 G5E9N8;Q7Z3D4-2;Q7Z3D4-3;Q7Z3D4 G5E9N8 LYSMD3 LysM and putative peptidoglycan-binding domain-containing protein 3 1 S(0.333)T(0.333)S(0.333)RDRLDDIIVLTK 150.98 3.7068000000000002e-06 666380000.0 393230.0 578410.0 468010.0 491790.0 426060.0 435620.0 392820.0 456770.0 765910.0 405920.0 True False 371416.74801542924 550622.3153888893 498178.67344247556 538529.5737379454 459588.498050208 432901.13399496576 432530.07915375376 455185.571480919 626840.0510198893 402323.8646009809 0.9231785153580067 1.3686046586746443 1.2382528536719095 1.3385474268896562 1.142334667385494 1.0760016297425234 1.0750793507681453 1.131390930369904 1.558048393777437 1.0 18.617997791123564 S(ph)TSSTSSGSNSNALVPVSWK ddPTM_KYSE-520_SHP099_60min_R1 4 STSSTSSGSNSNALVPVSWK 20 0 O94915;H0Y9X0;A0A2C9F2R7;A0A286YEZ9 O94915 FRYL Protein furry homolog-like 1 S(0.25)T(0.25)S(0.25)S(0.016)T(0.073)S(0.1)S(0.023)GS(0.032)NS(0.006)NALVPVSWK;S(0.266)T(0.266)S(0.266)S(0.033)T(0.033)S(0.033)S(0.033)GS(0.033)NS(0.033)NALVPVSWK;S(0.301)T(0.301)S(0.301)S(0.063)T(0.02)S(0.013)S(0.001)GSNSNALVPVSWK;S(0.279)T(0.279)S(0.279)S(0.07)T(0.07)S(0.02)S(0.001)GSNSNALVPVSWK 184.88 7.675300000000001e-13 475874000.0 674221.0 793997.0 605196.0 608415.0 594933.0 806501.0 651595.0 833964.0 879735.0 785207.0 True False 636820.6171037579 755852.1923062054 644207.9025078363 666238.5786733609 641750.8423942744 801467.3281026433 717464.5815543749 831071.1735326605 719997.3003146341 778250.6768618022 0.8182718448400929 0.9712194473817666 0.8277640118547966 0.856071955324066 0.8246068541591943 1.0298318420158132 0.9218939383997202 1.0678708008117002 0.925148312389438 1.0 19.569875400875553 -6.260991548841925 24.999991013252902 0.9889999652397444 0.863825429376121 0.5577891492651372 0.057529429751222105 31.257059863082315 1744932.290874158 0.018675950674722226 0.017606296537201322 5.482876342260743e-07 6.260991548841925 -0.12517453586362348 S(ph)TSTPNVHMVSTTLPVDSR ddPTM_KYSE-520_SHP099_60min_R1 7 STSTPNVHMVSTTLPVDSR 19 0 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 S(0.312)T(0.312)S(0.312)T(0.064)PNVHMVSTTLPVDSR;S(0.445)T(0.445)S(0.046)T(0.06)PNVHMVS(0.002)TTLPVDSR;S(0.363)T(0.363)S(0.27)T(0.003)PNVHMVSTTLPVDSR;S(0.333)T(0.333)S(0.333)T(0.001)PNVHMVSTTLPVDSR;S(0.356)T(0.356)S(0.282)T(0.006)PNVHMVSTTLPVDSR;S(0.331)T(0.331)S(0.331)T(0.007)PNVHMVSTTLPVDSR;S(0.33)T(0.33)S(0.33)T(0.011)PNVHMVSTTLPVDSR 203.72 1.2679e-13 7734480000.0 1848760.0 2342790.0 1950630.0 2442560.0 1972530.0 2040960.0 1663910.0 1787450.0 2422980.0 1801450.0 True False 1746205.5973883085 2230238.8518005195 2076370.7309183509 2674700.1680175583 2127756.8888395466 2028221.6115843283 1832114.260996696 1781249.753143968 1983027.910355223 1785490.5545068914 0.9779976673528623 1.2490902548719764 1.1629133101136977 1.4980197802033428 1.1916931643624296 1.1359464246196884 1.0261125472616577 0.9976248536559217 1.1106347806487762 1.0 20.767889071211126 -6.500141626546121 2.641590607485734 1.033795102840498 1.2298499956738773 0.32689355392192154 0.12251392667187783 0.3362047786839916 4.704070241010431 0.05159720916537202 0.0411599828858589 3.1612465868669666e-07 6.500141626546121 0.1960548928333794 S(ph)TTAHSWQR ddPTM_KYSE-520_SHP099_60min_R1 2 STTAHSWQR 9 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 S(0.961)T(0.014)T(0.025)AHSWQR;S(0.976)T(0.023)T(0.002)AHSWQR 141.89 0.0068182 247510000.0 401600.0 428020.0 418100.0 392590.0 417300.0 443860.0 347010.0 424230.0 531970.0 430440.0 True False 379322.4474302481 407457.27672888146 445051.3949836521 429901.6355635122 450139.13588779 441089.70509849314 382089.1572912371 422758.44514602644 435377.6578724004 426626.63647725293 0.8891204041135227 0.955067597497763 1.043187079593849 1.0076764993233935 1.0551125911984418 1.0339009976982798 0.8956054887857652 0.9909330759017604 1.0205121308585103 1.0 18.702614517738308 -4.452069149102678 3.5031102697355028 1.0044270245527378 0.8922273832174725 0.4297371650730849 0.0418002205214592 0.25851316854505574 5.70680575770012 0.011525580754963259 0.05673740850161131 3.531269398463491e-05 4.452069149102678 -0.11219964133526528 S(ph)TTELDDYSTNK ddPTM_KYSE-520_SHP099_60min_R1 4 STTELDDYSTNK 12 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.958)T(0.04)T(0.002)ELDDYSTNK;S(0.992)T(0.008)TELDDYSTNK;S(0.864)T(0.119)T(0.017)ELDDYSTNK;S(0.981)T(0.018)TELDDYSTNK 305.71 1.7585e-31 3989920000.0 7483600.0 6050930.0 5267090.0 5548930.0 5891600.0 6257000.0 5776200.0 6087620.0 7728600.0 6092830.0 True False 7068469.789813259 5760234.240168897 5606615.049041962 6076298.638853365 6355235.401381508 6217947.742083701 6360114.666279488 6066503.467081185 6325281.062151314 6038852.2663500095 1.1704988759537196 0.9538624205573564 0.9284239457692017 1.0062009088568065 1.0523912692473807 1.0296572043551482 1.0531992480954755 1.0045788834552645 1.047430998999157 1.0 22.52584294884354 -5.6552323247352145 9.195178853342375 1.032425859927207 1.003991223514174 0.004681143546056865 0.06232100877264583 1.0856508116254315 86.339670349865 0.018490635837797573 0.02387189739019455 2.21191113678822e-06 5.6552323247352145 -0.02843463641303301 S(ph)TTPPPAEPVSLPQEPPKPR ddPTM_KYSE-520_SHP099_60min_R1 3 STTPPPAEPVSLPQEPPKPR 20 1 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.451)T(0.451)T(0.097)PPPAEPVSLPQEPPKPR;S(0.333)T(0.333)T(0.333)PPPAEPVSLPQEPPKPR;S(0.417)T(0.417)T(0.167)PPPAEPVSLPQEPPKPR 197.4 2.2704e-13 56300800000.0 4748430.0 5784460.0 4336010.0 3660870.0 3962970.0 5165270.0 3782880.0 5129380.0 5891840.0 5159380.0 True False 4485025.122139475 5506565.85894853 4615516.1424613 4008797.9841192975 4274833.192785132 5133031.633970383 4165290.42775101 5111587.377986289 4822030.377199695 5113671.907136899 0.8770654831961251 1.0768320609821072 0.9025835498010054 0.7839372679589428 0.8359615693801079 1.0037858758217288 0.8145400220021389 0.9995923615772647 0.9429682750021224 1.0 22.285928169651314 -7.312790311575005 24.999882601895713 0.9784602830586938 0.9033543582992837 0.16571194992563087 0.08350637262066474 773.6491742705256 376642.27431966003 0.04763449162835226 0.02288291291669301 4.8664211217018e-08 7.312790311575005 -0.07510592475941014 S(ph)TTPTSSPFR ddPTM_KYSE-520_SHP099_60min_R1 1 STTPTSSPFR 10 0 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;H7C5N8;A0A2R8YET2;A0A2R8Y7F4;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.333)T(0.333)T(0.333)PT(0.001)SSPFR 64.82 0.030648 328390000.0 220790.0 249220.0 193470.0 148100.0 183810.0 213140.0 172230.0 191210.0 228330.0 200270.0 True False 208542.33856604705 237247.0971131532 205941.38576294508 162175.37947211118 198274.80126416165 211809.71419973136 189640.68920281783 190546.73713874936 186871.02773089663 198495.7636077023 1.0506135484997066 1.1952249902019934 1.0375102320569316 0.817021867492482 0.9988868158215338 1.0670742304523038 0.955389101288906 0.9599536719349687 0.9414358489797281 1.0 17.598748691440413 -4.997732240412642 24.13478750455597 0.9636584819162058 1.1212814441771655 0.47380364523040663 0.06767304363425072 39.085533585975 415932.56762094825 0.01782648751152392 0.036704483364418505 1.0052353663053949e-05 4.997732240412642 0.15762296226095962 S(ph)VAS(ph)NQSEMEFSSLQDMPK ddPTM_KYSE-520_SHP099_60min_R1 1 SVASNQSEMEFSSLQDMPK 19 0 Q8N163-2;Q8N163;G3V119;H0YB24;A0A087X2B6 Q8N163-2 CCAR2 Cell cycle and apoptosis regulator protein 2 2 S(0.989)VAS(0.822)NQS(0.189)EMEFSSLQDMPK 132.84 4.2193e-06 80477000.0 73182.0 69885.0 60145.0 62043.0 72896.0 71716.0 61527.0 60328.0 86219.0 72779.0 True False 69122.44857529984 66527.61970047638 64022.042935402475 67939.54806609181 78632.50047849603 71268.39384230057 67746.74960565384 60118.736248661015 70563.80300411771 72134.23468120518 0.958247479588356 0.9222752552167907 0.887540336684041 0.9418488789178724 1.0900857384293285 0.9879968111849919 0.93917610556289 0.8334286280897516 0.9782290380700933 1.0 16.138396500079743 -5.526572334368155 24.998244962830828 0.9672402213315697 0.9213211254932184 0.11257542824401001 0.06157479926709174 285.5070781998952 1932296.4901507054 0.02005108828742494 0.026007352160515838 2.9745937810652957e-06 5.526572334368155 -0.0459190958383513 S(ph)VAS(ph)S(ph)QPAKPTK ddPTM_KYSE-520_SHP099_60min_R1 4 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 3 S(1)VAS(1)S(0.996)QPAKPT(0.004)K;S(1)VAS(0.996)S(0.757)QPAKPT(0.247)K;S(1)VAS(1)S(1)QPAKPTK;S(1)VAS(1)S(0.992)QPAKPT(0.008)K 123.42 0.00013051 4128500000.0 6690000.0 6017600.0 5708600.0 5902600.0 5965800.0 5882300.0 5551900.0 6124000.0 7033900.0 6263300.0 True False 6318892.363815639 5728505.463398252 6076585.490082945 6463581.329318591 6435274.519241268 5845586.383771611 6113140.2333224425 6102757.273352346 5756721.070189446 6207812.034773669 1.0178936360217967 0.9227897738058861 0.9788610634542982 1.0412011982824554 1.0366413292144552 0.9416500291933751 0.9847495702316833 0.9830770067081851 0.9273349511780652 1.0 22.56565344440635 -9.038179421054707 11.30952078300152 1.0000005077547969 0.9821048719164963 0.0186731900585404 0.03990052349393307 0.0 0.0 0.039802250387291745 0.009653463675534431 9.158420480718312e-10 9.038179421054707 -0.01789563583830056 S(ph)VAS(ph)SQPAKPT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 4 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 3 S(1)VAS(0.988)S(0.173)QPAKPT(0.839)K;S(1)VAS(0.941)S(0.163)QPAKPT(0.896)K;S(1)VAS(0.997)S(0.188)QPAKPT(0.815)K;S(1)VAS(0.993)S(0.186)QPAKPT(0.82)K 130.47 0.00025778 3915130000.0 5675900.0 5030090.0 4457470.0 4814020.0 4871000.0 4656750.0 4366480.0 5042840.0 5368590.0 5056000.0 True False 5361046.512373859 4788436.926080986 4744805.648404161 5271543.013412114 5254319.987801169 4627685.495916298 4807886.411138133 5025347.565047709 4393789.3871406065 5011207.773508475 1.0698112620104858 0.9555454777578457 0.946838738854007 1.051950597873808 1.0485136967534845 0.9234670971697381 0.9594266748536767 1.0028216334620934 0.8767924990793989 1.0 22.256726925011453 -6.267214615046896 24.99177079277 0.9531107519708313 1.0095730075021856 0.2735965463664912 0.050207903429525455 759.30685239819 3285818.624744867 0.017687355741797587 0.01601169000848877 5.404871647182395e-07 6.267214615046896 0.05646225553135431 S(ph)VAS(ph)SQPAKPTK ddPTM_KYSE-520_SHP099_60min_R1 7 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 S(1)VAS(0.884)S(0.116)QPAKPTK;S(1)VAS(0.558)S(0.442)QPAKPTK;S(1)VAS(0.948)S(0.053)QPAKPTK;S(0.998)VAS(0.595)S(0.407)QPAKPTK;S(1)VAS(0.5)S(0.5)QPAKPTK;S(0.999)VAS(0.675)S(0.326)QPAKPTK;S(0.852)VAS(0.738)S(0.196)QPAKPT(0.214)K 154.72 2.4200999999999997e-05 8690100000.0 11977520.0 10975670.0 10187700.0 10144200.0 11094930.0 10116110.0 10012170.0 10370620.0 12203370.0 10489690.0 True False 11313103.089005822 10448382.338383455 10844415.44289635 11108301.71803507 11968037.869483635 10052971.605109535 11024297.852962771 10334646.739740914 9987545.629923338 10396759.507455325 1.088137422135561 1.0049652808542038 1.043057255976732 1.068438844821746 1.1511315483349958 0.966933167772202 1.0603590325483099 0.9940257569995852 0.9606402478350541 1.0 23.309630599211168 -7.0594854397849005 1.2883568923039053 0.979918583196382 1.0600151752223155 0.3217161033318573 0.04665386602917008 0.5907114720795594 1.8276988612747733 0.03599718549227353 0.015981664944202504 8.7199613545651e-08 7.0594854397849005 0.08009659202593344 S(ph)VASDVPEELDFLVPK ddPTM_KYSE-520_SHP099_60min_R1 1 SVASDVPEELDFLVPK 16 0 Q14966;Q14966-5;A0A096LNS4;A0A096LPK8 Q14966 ZNF638 Zinc finger protein 638 1 S(0.5)VAS(0.5)DVPEELDFLVPK 73.02199999999999 0.01718 26464000.0 19086.0 19365.0 19061.0 14724.0 14827.0 16411.0 15001.0 21906.0 22739.0 19997.0 True False 18027.261533002275 18434.676332542393 20289.702558678313 16123.364533067981 15993.800545910051 16308.572861648649 16517.447475651577 21830.013198898843 18610.17080354252 19819.84213743059 0.9095562622548363 0.9301121676306263 1.0237065672869499 0.8134961126969998 0.8069590279785881 0.8228407042076907 0.8333793660474064 1.1014221529883914 0.9389666514243544 1.0 14.274657851233638 -7.250414614581661 24.89036982314663 1.0151458058135485 0.8775871217808436 0.425573122923685 0.0725641494397788 683.356657390024 1542803.6023942058 0.03744338813342268 0.02134778328388289 5.618047223468327e-08 7.250414614581661 -0.13755868403270488 S(ph)VASS(ph)QPAKPTK ddPTM_KYSE-520_SHP099_60min_R1 5 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 S(0.789)VAS(0.219)S(0.992)QPAKPTK;S(1)VAS(0.017)S(0.983)QPAKPTK;S(1)VAS(0.244)S(0.755)QPAKPTK;S(1)VAS(0.231)S(0.769)QPAKPTK;S(0.995)VAS(0.22)S(0.785)QPAKPTK 206.55 1.8983000000000002e-08 5248570000.0 10780350.0 9698820.0 8985600.0 8789730.0 9504230.0 9344160.0 8702590.0 9233510.0 11178750.0 9508880.0 True False 10182342.495405067 9232874.128974391 9564826.153468324 9625103.296471303 10252158.829328563 9285839.63139983 9582332.726293629 9201481.108927445 9148970.793355064 9424638.720996702 1.0803960551527894 0.9796528442416484 1.014874568312025 1.0212702663103674 1.0878039076965644 0.9852727416184509 1.0167321008226669 0.9763218921514631 0.9707502923133287 1.0 23.168005885274038 -6.765125832827308 1.8345033091445042 0.9832256154059796 1.0303511955199502 0.291315809061813 0.033039057827625354 0.47871796808021316 3.2951791535118398 0.01740711137238936 0.010857974269597082 1.717410711122283e-07 6.765125832827308 0.04712558011397061 S(ph)VASSQPAKPTK ddPTM_KYSE-520_SHP099_60min_R1 8 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(1)VASSQPAKPTK;S(1)VASSQPAKPTK;S(0.999)VAS(0.001)SQPAKPTK;S(0.968)VAS(0.032)SQPAKPTK;S(0.803)VAS(0.173)S(0.024)QPAKPTK;S(0.999)VAS(0.001)SQPAKPTK;S(0.904)VAS(0.076)S(0.02)QPAKPTK;S(1)VASSQPAKPTK 194.86 9.6669e-08 11010590000.0 20783040.0 18867960.0 17028420.0 16903770.0 17586070.0 17786880.0 16385240.0 16672860.0 20940950.0 16741550.0 True False 19630163.341236904 17961514.88021465 18126099.19963534 18510299.218496207 18969993.657949172 17675865.48421185 18041619.963732086 16615025.740134778 17138601.35839061 16593232.891728818 1.183022227755382 1.0824602413172828 1.0923790028084646 1.1155330211584618 1.1432367508928951 1.065245428636314 1.0872878167536142 1.00131335759271 1.03286692052238 1.0 23.984091660962203 -6.994492447787027 1.211532690715355 1.0061381578092523 1.118308315917215 0.6871171750407259 0.031202603799597686 0.2846833863133546 0.7890407529671051 0.023129755359498214 0.010782478787039316 1.0127623602069185e-07 6.994492447787027 0.1121701581079626 S(ph)VDALDDLTPPSTAESGSR ddPTM_KYSE-520_SHP099_60min_R1 3 SVDALDDLTPPSTAESGSR 19 0 S4R3V8;Q86X29-6;Q86X29-5;Q86X29-2;Q86X29-3;Q86X29-4;Q86X29 S4R3V8 LSR Lipolysis-stimulated lipoprotein receptor 1 S(1)VDALDDLTPPSTAESGSR;S(1)VDALDDLTPPSTAESGSR;S(1)VDALDDLTPPSTAESGSR 168.42 8.725299999999998e-09 1090600000.0 486024.0 462160.0 322951.0 362701.0 362262.0 507110.0 460287.0 564380.0 659300.0 515480.0 True False 459063.2798551759 439957.13988369703 343768.9381998698 397171.99398996844 390769.9584111735 503944.9383870965 506817.30192822113 562422.2975072826 539587.7396004917 510913.24823737086 0.8985151225553943 0.8611190674767792 0.6728518772724296 0.7773765807799955 0.7648460081223444 0.9863610703493896 0.9919830884728854 1.1008176034730275 1.0561239925996178 1.0 18.962718820467135 -6.389890207534072 3.0423206363070125 1.0427393520997075 0.7901481227096221 0.7711845112150983 0.06342828606379503 0.13237212289589695 2.3377167021318286 0.02619967897911578 0.022514523107623318 4.0748327920358964e-07 6.389890207534072 -0.2525912293900854 S(ph)VDEIAK ddPTM_KYSE-520_SHP099_60min_R1 1 SVDEIAK 7 0 A6ND36;A6ND36-2 A6ND36 FAM83G Protein FAM83G 1 S(1)VDEIAK 100.02 0.012248 0.0 180690.0 176620.0 146000.0 162800.0 189460.0 172180.0 156320.0 176090.0 188070.0 176840.0 True False 170666.76550341523 168134.91008797512 155411.3936082595 178272.46305239532 204369.42412005953 171105.3607530718 172122.35113618107 175479.1848897149 153921.2288588873 175273.335179438 0.9737177952863922 0.9592726122079275 0.8866801869728523 1.0171111473966472 1.1660040810590733 0.9762201453969072 0.9820224562964408 1.001174449667807 0.8781782391560516 1.0 17.41924700601369 -5.291790516215217 24.533895254378354 1.0078147033724654 0.9418284214163127 0.14543097654346104 0.06931601362696962 1039.0973831412193 839936.4196370813 0.020663450242866727 0.030653384131376384 5.107513036247482e-06 5.291790516215217 -0.06598628195615264 S(ph)VDEVNYWDK ddPTM_KYSE-520_SHP099_60min_R1 12 SVDEVNYWDK 10 0 F5H5P2;P12694;P12694-2;F5GXU9 F5H5P2 BCKDHA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial 1 S(1)VDEVNYWDK;S(1)VDEVNYWDK;S(1)VDEVNYWDK;S(1)VDEVNYWDK;S(1)VDEVNYWDK;S(1)VDEVNYWDK;S(1)VDEVNYWDK;S(1)VDEVNYWDK;S(1)VDEVNYWDK;S(1)VDEVNYWDK;S(1)VDEVNYWDK;S(1)VDEVNYWDK 240.31 1.2779e-13 13812920000.0 8117360.0 7191660.0 5948680.0 6748490.0 7316580.0 7175470.0 7484230.0 7270830.0 8131660.0 6547910.0 True False 7667073.859244021 6846161.858698262 6332141.431024533 7389864.460592504 7892353.220354403 7130685.230124556 8240809.007445895 7245609.187754483 6655155.526467058 6489900.6115968935 1.1813854045073695 1.054894715408239 0.9756915875891137 1.1386714378009815 1.216097702059019 1.0987356597391702 1.2697897087545962 1.1164437826377809 1.0254633968623292 1.0 22.62976495382683 -3.6310950179569548 5.26983069864722 1.1097791078263655 7.487302758300011 0.06098750858879154 0.08835985882539181 5810.329838726161 1243.9388695469122 0.023144667583621572 437926.341553223 0.00023383255876105357 3.6310950179569548 6.377523650473646 S(ph)VDEVNYWDKQDHPISR ddPTM_KYSE-520_SHP099_60min_R1 3 SVDEVNYWDKQDHPISR 17 1 F5H5P2;P12694;P12694-2 F5H5P2 BCKDHA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial 1 S(1)VDEVNYWDKQDHPISR;S(1)VDEVNYWDKQDHPISR;S(1)VDEVNYWDKQDHPISR 209.01 4.5715e-18 3289890000.0 3090430.0 3410300.0 3101420.0 2596690.0 2859150.0 2718670.0 2466060.0 2471440.0 4061700.0 2462630.0 True False 2918997.687280533 3246464.06903534 3301342.4956474532 2843478.636876686 3084148.8386618174 2701701.77209057 2715353.411226271 2462867.151478434 3324197.667124704 2440813.0140971495 1.1959120466916482 1.330074876807472 1.3525585436410874 1.1649719255239557 1.2635743995336883 1.1068860074436806 1.1124790778906402 1.0090355702193936 1.361922297171263 1.0 21.21893034663598 -5.97254875502329 1.4140146600691974 1.1173426616113982 1.2855361566265158 0.29913390505883375 0.1070287954791109 0.5019978622590809 2.0712093894825245 0.042603584134776114 0.04896094665051596 1.065249269312909e-06 5.97254875502329 0.1681934950151176 S(ph)VDFDSLTVR ddPTM_KYSE-520_SHP099_60min_R1 6 SVDFDSLTVR 10 0 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 1 S(1)VDFDSLTVR;S(1)VDFDSLTVR;S(1)VDFDSLTVR;S(1)VDFDSLTVR;S(1)VDFDSLTVR;S(1)VDFDSLTVR 211.46 5.322600000000001e-09 4042100000.0 3956800.0 3684960.0 3364840.0 3165650.0 3614110.0 3063820.0 3309180.0 3347480.0 4836970.0 4085710.0 True False 3737308.4163147537 3507928.990362278 3581742.9703343506 3466512.4242126257 3898519.8955270103 3044697.562913675 3643704.208884522 3335868.373187708 3958698.1780909924 4049513.7880342756 0.9229029982211584 0.866259302716217 0.8844871650808747 0.8560317622465359 0.9627130810238428 0.751867439471453 0.8997880732376163 0.8237700987819115 0.9775737002768998 1.0 21.94931726801259 -7.863332338629788 6.0863660136713635 0.9974334666857577 0.8710232243619216 0.4358935168785134 0.05376506604435558 0.1848626258255104 8.970947769834112 0.048705509410087514 0.012671100956365802 1.3698331166628402e-08 7.863332338629788 -0.12641024232383613 S(ph)VEDDAEGHLIYHVGDWLQER ddPTM_KYSE-520_SHP099_60min_R1 2 SVEDDAEGHLIYHVGDWLQER 21 0 B1AVT0;P49760-3;P49760 B1AVT0 CLK2 Dual specificity protein kinase CLK2 1 S(1)VEDDAEGHLIYHVGDWLQER;S(1)VEDDAEGHLIYHVGDWLQER 286.61 8.5998e-44 508000000.0 54457.0 44386.0 36189.0 40593.0 37940.0 46640.0 35522.0 41030.0 48586.0 42343.0 True False 51436.16165266185 42253.62993525572 38521.800844447265 44450.94651526955 40925.66215092923 46348.902459770434 39112.91042131162 40887.67650647398 39764.007153389175 41967.87396235552 1.225607990025876 1.0068089218233098 0.9178878319878837 1.0591660315016505 0.9751664377289844 1.1043900508599653 0.9319726430839753 0.9742613252972867 0.9474868131051104 1.0 15.356997759579183 -4.266338971183823 5.052815177693689 0.9902583665308125 1.2360938840180036 0.6335234629150148 0.053708729396514075 0.0996099107500278 8.179694297975226 0.013190766377266024 0.08528575258325898 5.4157801833886414e-05 4.266338971183823 0.24583551748719112 S(ph)VEDDKEGHLVCR ddPTM_KYSE-520_SHP099_60min_R1 5 SVEDDKEGHLVCR 13 1 H3BUL5;H3BVF8;P49761-3;P49761-1;P49761;H3BQG1 H3BUL5 CLK3 Dual specificity protein kinase CLK3 1 S(1)VEDDKEGHLVCR;S(1)VEDDKEGHLVCR;S(1)VEDDKEGHLVCR;S(1)VEDDKEGHLVCR;S(1)VEDDKEGHLVCR 178.51 1.6276e-07 7625060000.0 4260510.0 3895630.0 3389780.0 3592000.0 3772920.0 3614990.0 3723660.0 3856220.0 4173910.0 3509620.0 True False 4024171.0171838836 3708478.087340157 3608290.642639767 3933382.600025818 4069827.33902172 3592427.506497548 4100083.8922195 3842843.672868514 3416033.159708614 3478527.4972430407 1.1568604877705584 1.0661057272881607 1.0373040447429471 1.1307608185196982 1.169985674181769 1.0327437426741 1.178683766469888 1.1047328721461072 0.9820342551312423 1.0 21.73004529436427 -7.757653404578354 24.532992110894963 0.9910170824337932 1.108237187856089 0.48050716144307315 0.049322035079335906 60.5026234284429 392081.9606038858 0.03625016052768932 0.012512564347881994 1.7472159893770383e-08 7.757653404578354 0.11722010542229588 S(ph)VEDVRPHHTDANNQSACFEAPDQK ddPTM_KYSE-520_SHP099_60min_R1 2 SVEDVRPHHTDANNQSACFEAPDQK 25 1 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.994)VEDVRPHHT(0.005)DANNQS(0.001)ACFEAPDQK;S(0.992)VEDVRPHHT(0.008)DANNQSACFEAPDQK 120.18 0.00014681 1294420000.0 519620.0 774530.0 758760.0 2235520.0 619690.0 473300.0 529580.0 465100.0 698860.0 611090.0 True False 490795.64276321034 737320.4162067675 807670.8836589237 2447983.148666404 668456.0774462129 470345.95913827943 583115.1146027308 463486.67665515596 571964.6408269368 605676.218020826 0.810326752414001 1.217350779623008 1.3335027191560493 4.041735626777129 1.1036525086465063 0.7765633603301009 0.9627505542617831 0.7652383614626571 0.9443405961950284 1.0 19.208187239274597 -5.9781259449842015 24.99999515490208 0.8863813448231811 1.869061532278467 0.24059314661133613 0.8125157564387976 360.0206813721116 411467.9418584741 0.26511528499575365 0.3005915409768151 1.0516568501168029e-06 5.9781259449842015 0.9826801874552858 S(ph)VEEVASEIQPFLR ddPTM_KYSE-520_SHP099_60min_R1 3 SVEEVASEIQPFLR 14 0 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 S(1)VEEVASEIQPFLR;S(1)VEEVASEIQPFLR;S(1)VEEVASEIQPFLR 196.33 6.133e-11 46757000.0 50285.0 45822.0 34167.9 64077.0 36117.8 41519.0 40242.0 56277.0 57796.0 37172.0 True False 47495.59080933771 43620.6423397758 36370.41750457293 70166.85881454745 38960.065377828985 41259.86452030893 44310.05408407245 56081.78822215055 47301.703318595515 36842.684999378405 1.2891457506459976 1.1839702329108681 0.9871815125631195 1.9044990563454123 1.0574708487854863 1.11989298611122 1.2026825429476715 1.522196013213932 1.2838831729933247 1.0 15.169090584684842 -9.94671379520215 20.35014139637234 0.9998704895175153 1.2832546924243764 0.10372584247611771 0.24994931985410762 0.0 0.0 0.23977497938826564 0.05815397449400688 1.1305407078830213e-10 9.94671379520215 0.28338420290686106 S(ph)VELCCASR ddPTM_KYSE-520_SHP099_60min_R1 1 SVELCCASR 9 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(1)VELCCASR 144.17 0.0017136 0.0 28996.0 24225.0 27955.0 29212.0 27338.0 27083.0 23949.0 25890.0 29723.0 28728.0 True False 27387.534077907054 23061.194637533674 29757.02402958147 31988.29969709195 29489.345068057544 26913.964951071233 26369.998639715985 25800.19363277142 24326.052455855315 28473.492270045812 0.9618607306107938 0.8099180254679933 1.0450781290669404 1.123441388703265 1.035677140983525 0.945228800732139 0.9261244946569934 0.9061127236546707 0.8543403185371253 1.0 14.797331829836923 -6.508935472003581 4.0938465479798944 0.9152248388019636 0.994864140826643 0.15187333161034722 0.08197586913655937 0.4463307983787779 17.329921366667765 0.03482394836611089 0.028408645281011596 3.097879551692708e-07 6.508935472003581 0.07963930202467939 S(ph)VELDLNQAHMEETPK ddPTM_KYSE-520_SHP099_60min_R1 12 SVELDLNQAHMEETPK 16 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK;S(1)VELDLNQAHMEETPK 278.58 2.5899e-30 7743790000.0 10167170.0 9669710.0 8474060.0 8862990.0 9894100.0 9170020.0 9251360.0 9931990.0 11194780.0 10017200.0 True False 9603176.81234908 9205162.61706939 9020311.466575388 9705325.90484488 10672709.380271725 9112786.503733795 10186577.753372703 9897538.244833902 9162090.149438472 9928455.401263673 0.967237744868835 0.9271495157139726 0.9085311966478997 0.9775262629078846 1.0749617084358687 0.9178453380144044 1.025998238565505 0.9968860054076653 0.9228112308660158 1.0 23.2431378602635 -5.422413620835309 6.543490638015345 0.991096206719827 0.9342666758371965 0.23344431339697025 0.044956194808059645 0.345194243448649 19.158508163886044 0.012487693417224402 0.01856103527512971 3.780823286512373e-06 5.422413620835309 -0.05682953088263054 S(ph)VELDLNQAHMEETPKR ddPTM_KYSE-520_SHP099_60min_R1 2 SVELDLNQAHMEETPKR 17 1 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 S(1)VELDLNQAHMEETPKR;S(1)VELDLNQAHMEETPKR 273.27 4.3926e-30 1162240000.0 672820.0 652130.0 638970.0 599840.0 620410.0 652070.0 618060.0 654630.0 819410.0 706100.0 True False 635497.3333665818 620800.695932914 680159.0285881484 656848.6132515279 669232.7373499741 648000.189256915 680539.5364843161 652359.2413217905 670625.7996451377 699844.5033374877 0.9080550469939527 0.8870551857910982 0.9718716448361583 0.9385636525243582 0.9562591892319948 0.9259202382338757 0.9724153483222228 0.9321488390789029 0.9582497203978757 1.0 19.41667488337418 S(ph)VENLPECGITHEQR ddPTM_KYSE-520_SHP099_60min_R1 10 SVENLPECGITHEQR 15 0 Q9UBF8-2;A0A0B4J1S8;Q9UBF8;F8W860;Q9UBF8-3 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR;S(1)VENLPECGITHEQR 258.68 3.2399000000000003e-22 17339710000.0 10670120.0 9407690.0 9334250.0 8552670.0 9131350.0 9412590.0 8189970.0 9117030.0 10586970.0 8896860.0 True False 10078227.17324313 8955730.451169426 9935950.69032805 9365513.185346004 9849935.294725552 9353842.534387011 9017892.09400454 9085405.1508608 8664643.123795258 8818040.742052335 1.142910025940467 1.0156145467167623 1.126775321296092 1.06208549714256 1.1170208420281182 1.0607620000868778 1.0226639179607249 1.0303201602974492 0.9826041155009027 1.0 23.072026711986734 -6.783887572110632 1.7394891009886755 1.0037312844015205 1.0893162958066362 0.5589124373595931 0.03531248310892077 0.2770873918730421 1.7108065256690725 0.0181284511600543 0.010983837548335427 1.6447974646909522e-07 6.783887572110632 0.08558501140511576 S(ph)VEYEGDLK ddPTM_KYSE-520_SHP099_60min_R1 2 SVEYEGDLK 9 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(1)VEYEGDLK;S(1)VEYEGDLK 135.66 0.00048353 771720000.0 707060.0 604240.0 567580.0 607680.0 623780.0 624840.0 592590.0 643120.0 705340.0 583680.0 True False 667837.972310835 575211.4034172687 604167.1149601084 665433.7244943457 672867.9371772971 620940.1417873708 652494.7803210705 640889.1668253369 577268.0361744432 578509.0492961688 1.154412317531327 0.9942997505693087 1.0443520558496984 1.15025637940138 1.1631070213956516 1.073345598556885 1.127890360772947 1.1078291127944524 0.9978548077627558 1.0 19.14198000122437 -7.763770441858776 24.981836115054723 0.9989273391400489 1.099990970205439 0.4012345703641871 0.050289505907157056 66.84008042111346 716241.9921844662 0.04379753349387354 0.013395245401279982 1.722778955958957e-08 7.763770441858776 0.10106363106538996 S(ph)VHREESCSDSGTK ddPTM_KYSE-520_SHP099_60min_R1 4 SVHREESCSDSGTK 14 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 S(0.999)VHREES(0.001)CSDSGTK;S(1)VHREESCSDSGTK;S(0.999)VHREES(0.001)CSDSGTK;S(0.999)VHREES(0.001)CSDSGTK 73.208 0.01043 288752000.0 346688.7 435380.0 397185.4 589065.0 433281.0 356483.1 410305.7 424287.0 539921.0 458169.0 True False 327457.18670421065 414463.6912812971 422788.6064031097 645049.5604911502 467377.7496683382 354258.1567422086 451783.4043537405 422815.24742632976 441884.95670079906 454109.97911008855 0.721096654484279 0.9126945241183962 0.9310269006456127 1.420469908534586 1.0292170865398076 0.7801153311725105 0.9948766271093461 0.9310855671018582 0.9730791592969469 1.0 18.792682214908485 -4.387691408256151 2.1955344987785628 1.0111191823260928 0.6903814038655263 0.2478279522561646 0.15326073664768528 0.7519923262971426 5.087649739457685 0.04413482113389587 0.42318907414639145 4.095515668135356e-05 4.387691408256151 -0.3207377784605665 S(ph)VLT(ph)MNPRMRK ddPTM_KYSE-520_SHP099_60min_R1 1 SVLTMNPRMRK 11 2 F8VTS6;A6NLU0 F8VTS6 RFPL4AL1;RFPL4A Ret finger protein-like 4A-like protein 1;Ret finger protein-like 4A 2 S(1)VLT(1)MNPRMRK 53.6 0.0294 0.0 575660.0 489160.0 510390.0 463860.0 455490.0 462240.0 435800.0 523260.0 608430.0 481650.0 True False 543726.992250241 465660.0193558708 543290.5560528737 507945.11493540567 491334.4716164142 459354.98870077817 479854.9169981304 521444.9331898015 497954.4492721475 477382.9557180301 1.138974455911236 0.975443328628005 1.1380602293094277 1.0640202144867261 1.0292249979419557 0.9622358385415413 1.0051781515248743 1.0922990168459155 1.0430922246127867 1.0 18.864787532393915 -4.23468485636143 23.610111925692568 1.0381150172028248 1.1389747479811445 0.27267796785413634 0.050914457148109514 6510.936102613011 5745529.069849855 0.013101557077012679 1.003317705546225 5.8252577137955533e-05 4.23468485636143 0.10085973077831967 S(ph)VNFS(ph)LTPNEIK ddPTM_KYSE-520_SHP099_60min_R1 2 SVNFSLTPNEIK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(1)VNFS(0.733)LT(0.267)PNEIK;S(1)VNFS(0.989)LT(0.011)PNEIK 158.35 4.7536000000000005e-06 730110000.0 2991100.0 2616600.0 2678000.0 2675400.0 2447800.0 2550900.0 2422700.0 2594300.0 3255300.0 2716800.0 True False 2825177.720389975 2490894.6084033255 2850628.1649514968 2929669.211611659 2640427.933923158 2534978.8868916873 2667610.1592734503 2585300.9788141707 2664219.5794349783 2692731.265638414 1.049186659077975 0.925043891378728 1.0586381943597507 1.0879916793022677 0.9805761041279195 0.9414154762639021 0.990670771091965 0.9601035988272775 0.9894116109664305 1.0 21.360638825500025 -5.968452679484548 24.99819481043457 0.9731983126505439 1.0259269750431361 0.26952867491641475 0.04255416473767856 284.1293737792938 225143.81189028968 0.013598482338975716 0.015419093872023473 1.0753437629428493e-06 5.968452679484548 0.05272866239259222 S(ph)VNFSLT(ph)PNEIK ddPTM_KYSE-520_SHP099_60min_R1 3 SVNFSLTPNEIK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(1)VNFSLT(1)PNEIK;S(0.998)VNFS(0.347)LT(0.655)PNEIK;S(1)VNFS(0.106)LT(0.894)PNEIK 191.3 1.8315000000000002e-07 744840000.0 3243690.0 2735050.0 2610010.0 2635890.0 2548600.0 2561120.0 2498820.0 2815560.0 3168460.0 2743650.0 True False 3063756.0495642954 2603654.0926062553 2778255.420763655 2886404.1930907774 2749160.320449608 2545135.1000807765 2751425.1117330613 2805793.4795166426 2593147.5343767228 2719343.3955274 1.1266528731175927 0.9574568981940924 1.0216640624840356 1.0614342410149995 1.0109647516276352 0.9359373679200832 1.0117975965295252 1.0317907933699841 0.953593260285466 1.0 21.37482691404577 -5.9992734192224955 24.997360759405797 0.9883248644267907 1.0345715174736323 0.2304969565481777 0.046734513919173395 43.78628468702082 1506333.0936511995 0.014296959264999281 0.01607800297634669 1.0016744143359534e-06 5.9992734192224955 0.04624665304684161 S(ph)VPATPVLTR ddPTM_KYSE-520_SHP099_60min_R1 3 SVPATPVLTR 10 0 Q96HB5-2;Q96HB5;Q96HB5-5;Q96HB5-3;Q96HB5-4 Q96HB5-2 CCDC120 Coiled-coil domain-containing protein 120 1 S(0.977)VPAT(0.023)PVLTR;S(1)VPATPVLTR;S(1)VPATPVLTR 133.85 0.00030107 620140000.0 310053.0 358555.0 271281.0 236897.0 305604.0 269960.0 259467.0 283036.0 393370.0 288747.0 True False 292853.74201466783 341329.4795979727 288768.207324947 259411.61965431983 329653.2961510961 268275.07950342225 285696.45651389187 282054.2141770991 321943.9240507284 286188.92622176686 1.023288167997585 1.1926718622700223 1.009012511899854 0.9064348613310866 1.151872996985386 0.9374055210491854 0.9982792146629273 0.9855525086199046 1.1249349452510091 1.0 18.12660832402052 -4.805888051368882 24.6979376094102 1.0114292802511884 1.1079801419960262 0.1786440452953486 0.0802718794816983 158.22483499208474 87917.12310128183 0.02001884250493305 0.04167295578185453 1.5635506290984013e-05 4.805888051368882 0.09655086174483785 S(ph)VPGTTLESFR ddPTM_KYSE-520_SHP099_60min_R1 4 SVPGTTLESFR 11 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(0.989)VPGT(0.005)T(0.005)LESFR;S(0.992)VPGT(0.004)T(0.004)LESFR;S(0.988)VPGT(0.006)T(0.006)LESFR;S(0.997)VPGT(0.002)T(0.002)LESFR 116.74 0.00025576 2051120000.0 681873.0 1053766.0 716315.0 556658.0 705920.0 753160.0 484895.0 656674.0 961395.0 645284.0 True False 644048.1454098749 1003141.4996249883 762489.8110445237 609562.6089546704 761471.887864627 748459.2490694827 533912.918719157 654396.1511628631 786829.902795715 639567.2857833557 1.007006080089026 1.568469060133867 1.1921963927698551 0.9530859731327018 1.190604811707903 1.1702588073321383 0.8348033593763462 1.0231857784304035 1.2302535171604172 1.0 19.286736620501514 -5.001818141655672 24.999139215084053 1.06041198284585 1.3108863654662697 0.2358197715496385 0.16852543964038458 88.62803872346588 1218695.5156987272 0.042765044833818114 0.0869765003767031 9.958223249916192e-06 5.001818141655672 0.25047438262041966 S(ph)VPGTTLESFRR ddPTM_KYSE-520_SHP099_60min_R1 1 SVPGTTLESFRR 12 1 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(0.998)VPGT(0.002)TLESFRR 69.045 0.016541999999999998 392470000.0 180760.0 133190.0 137210.0 142840.0 135540.0 130470.0 143320.0 136060.0 180700.0 136330.0 True False 170732.88246387354 126791.35247773428 146054.77614376208 156415.47065358804 146206.22688289257 129655.68833461068 157808.1842684078 135588.03961664278 147889.4350763063 135122.222263135 1.2635440685055555 0.9383456721931549 1.0809086299612303 1.1575850961730552 1.0820294725331912 0.9595437831248892 1.1678921618169844 1.0034473778310178 1.0944864034896395 1.0 17.043905434906335 -1.0000000000000002 0.08126399560461811 0.9605837888479969 1.3693914169939663 0.11060035307919647 0.09153754601153032 541.3043867338571 3.208523608823956 2.391817187701483 24.820780204203974 0.09999999999999995 1.0000000000000002 0.4088076281459694 S(ph)VPNT(ph)PLRPNQQSVVNSSFSELFVK ddPTM_KYSE-520_SHP099_60min_R1 1 SVPNTPLRPNQQSVVNSSFSELFVK 25 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 2 S(1)VPNT(1)PLRPNQQSVVNSSFSELFVK 95.302 0.0030587 259690000.0 86603.0 108040.0 118300.0 109210.0 105400.0 103950.0 103610.0 120190.0 143360.0 136340.0 True False 81798.95895119967 102849.59622865389 125925.80728669254 119589.2855648161 113694.38035603428 103301.20949170539 114083.90993615493 119773.08894255699 117329.43781150696 135132.13367091495 0.6053257410291717 0.7611039168457282 0.931871671569677 0.8849803693328037 0.8413571018786126 0.7644459292211956 0.8442396847960796 0.8863405445387136 0.868257124521081 1.0 17.044011254764886 -4.423072633229725 3.0937485535520897 0.8670879098083116 0.6019032441997195 0.6672410653592495 0.059396156480467935 0.17471841526844 2.8060432076531154 0.015454637282425944 0.09027761921637943 3.775090494495849e-05 4.423072633229725 -0.2651846656085921 S(ph)VPNTPLRPNQQSVVNSSFSELFVK ddPTM_KYSE-520_SHP099_60min_R1 3 SVPNTPLRPNQQSVVNSSFSELFVK 25 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 S(0.775)VPNT(0.225)PLRPNQQSVVNSSFSELFVK;S(0.994)VPNT(0.006)PLRPNQQSVVNSSFSELFVK;S(1)VPNTPLRPNQQSVVNSSFSELFVK 318.27 2.5620999999999994e-61 3349107000.0 580130.0 705330.0 699570.0 533460.0 586110.0 676820.0 667884.0 605940.0 843360.0 554190.0 True False 547949.0324395158 671444.8880780864 744665.401551575 584159.8780094024 632233.5224902778 672595.7153263693 735400.2326396956 603838.1355674592 690227.0833755056 549280.3077532956 0.9975763279786506 1.2224084471997128 1.3557110841957125 1.063500492851771 1.15102164335052 1.224503601954104 1.338843250448356 1.0993260217853427 1.256602637365101 1.0 19.067183045164654 -10.158488612277118 4.451877573405087 0.9999653805976757 1.1936410312724433 0.21347125034460768 0.10917155018757346 3.706199179124338e-05 7.005330213812227e-06 0.1041064836531031 0.025245006988883805 6.942428053555654e-11 10.158488612277118 0.19367565067476755 S(ph)VPSIAAATGTHSR ddPTM_KYSE-520_SHP099_60min_R1 1 SVPSIAAATGTHSR 14 0 Q8IY63;Q8IY63-2 Q8IY63 AMOTL1 Angiomotin-like protein 1 1 S(0.856)VPS(0.143)IAAATGTHSR 69.403 0.023388 345210000.0 80654.0 123060.0 142620.0 101920.0 103630.0 112020.0 106260.0 108540.0 157930.0 53317.0 True False 76179.96184023707 117148.01288317413 151813.51340006842 111606.4461566347 111785.09142595658 111320.84162829093 117001.79779766267 108163.50007342648 129253.89309131748 52844.65285999833 1.4415831634292522 2.2168375898605124 2.8728263917688874 2.111972358912346 2.1153529330982552 2.1065677529042333 2.214070704705664 2.0468201458335757 2.4459218879486375 1.0 15.689469877975961 -9.810951502162077 6.097448247542679 0.9999999352592389 2.188244313602643 0.5228382510280257 0.3364283319514614 3.0668707500746615e-07 5.998388332508758e-08 0.32726630897824843 0.07937373407040202 1.5454270083529197e-10 9.810951502162077 1.1882443783434042 S(ph)VQAHEVHQK ddPTM_KYSE-520_SHP099_60min_R1 4 SVQAHEVHQK 10 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 S(1)VQAHEVHQK;S(1)VQAHEVHQK;S(1)VQAHEVHQK;S(1)VQAHEVHQK 154.6 7.7865e-05 1425229000.0 1409465.0 1212213.0 1290634.0 1280502.0 1219609.0 1124301.0 1257133.0 1402368.0 1535345.0 1347211.0 True False 1331279.16675118 1153976.467911191 1373830.3327274139 1402200.5250830352 1315585.2896740288 1117283.82042072 1384216.2720757488 1397503.5127231516 1256565.0508977945 1335275.7586542976 0.9970069164536131 0.8642233339682422 1.0288738665577004 1.050120558240483 0.9852536310551215 0.836743880939416 1.0366519897513709 1.0466029235276222 0.9410528445181777 1.0 20.34870628469024 -4.779029136429293 24.996212214893102 0.9904025673258493 0.9306150514241499 0.11290249304166788 0.06732349851966193 485.1580965250841 689442.8683436998 0.018194637663466448 0.03801068450186645 1.6633010572430137e-05 4.779029136429293 -0.059787515901699395 S(ph)VQEGENPDDGVR ddPTM_KYSE-520_SHP099_60min_R1 3 SVQEGENPDDGVR 13 0 H7C5M1;Q5TCT4;A2A2V2;P42696-2;P42696 H7C5M1 RBM34 RNA-binding protein 34 1 S(1)VQEGENPDDGVR;S(1)VQEGENPDDGVR;S(1)VQEGENPDDGVR 278.89 2.1903999999999997e-34 1509760000.0 1822050.0 1621000.0 1661274.0 1620128.0 1680694.0 1909985.0 1981868.0 2277938.0 2388000.0 2196580.0 True False 1720977.2543333764 1543124.7268293959 1768362.3801723819 1774104.478010753 1812955.0559592464 1898064.0751420378 2182214.5586077333 2270036.3647527266 1954399.3965811844 2177120.010113378 0.7904834121862455 0.7087917614376409 0.8122484621691988 0.8148859363606523 0.8327308772771019 0.8718233566936865 1.0023400402691123 1.0426785635186504 0.8976994320489503 1.0 21.053989505202782 -6.3538287106376234 1.272993661815647 0.9924319113066832 0.7733809785211212 0.7967141396631181 0.046097639196616594 0.19176168065078578 0.6325455095261401 0.023829653125738835 0.019822353767787296 4.4276296733310057e-07 6.3538287106376234 -0.21905093278556198 S(ph)VQSAAVPAPTSQLLSSLEK ddPTM_KYSE-520_SHP099_60min_R1 2 SVQSAAVPAPTSQLLSSLEK 20 0 Q96T58;A0A669KB49;F6WRY4;H0Y5U7 Q96T58 SPEN Msx2-interacting protein 1 S(0.966)VQS(0.034)AAVPAPTSQLLSSLEK;S(0.998)VQS(0.002)AAVPAPTSQLLSSLEK 119.27 6.5229e-05 119389000.0 606600.0 597200.0 532720.0 463930.0 436010.0 643140.0 514190.0 669620.0 641080.0 661220.0 True False 572950.6887728798 568509.6155845243 567059.9835821362 508021.76771435986 470321.50644245226 639125.9246993294 566169.3432108056 667297.2445104828 524676.0323116683 655362.1052213764 0.8742505619535956 0.8674740438226681 0.8652620880338933 0.775177209159437 0.7176513605155446 0.975225634206356 0.8639030830437744 1.0182115187833065 0.8005895185752869 1.0 19.321932729267797 -6.283040905311713 24.877313344302415 0.9284939913772274 0.8226310478611792 0.35827626338875873 0.07459438210465404 924.0852255852315 1064215.464489587 0.02599840335426084 0.022949018326075436 5.211456231497538e-07 6.283040905311713 -0.10586294351604819 S(ph)VQSAAVPAPTSQLLSSLEKDEPR ddPTM_KYSE-520_SHP099_60min_R1 8 SVQSAAVPAPTSQLLSSLEKDEPR 24 1 Q96T58;A0A669KB49;F6WRY4;H0Y5U7 Q96T58 SPEN Msx2-interacting protein 1 S(0.999)VQS(0.001)AAVPAPTSQLLSSLEKDEPR;S(1)VQSAAVPAPTSQLLSSLEKDEPR;S(0.996)VQS(0.004)AAVPAPTSQLLSSLEKDEPR;S(1)VQSAAVPAPTSQLLSSLEKDEPR;S(1)VQSAAVPAPTSQLLSSLEKDEPR;S(1)VQSAAVPAPTSQLLSSLEKDEPR;S(0.95)VQS(0.05)AAVPAPTSQLLSSLEKDEPR;S(0.999)VQS(0.001)AAVPAPTSQLLSSLEKDEPR 152.31 2.9365e-07 2699735000.0 2430360.0 2276410.0 2087510.0 2162780.0 2152470.0 2011500.0 2059260.0 2513040.0 2832290.0 2129250.0 True False 2295543.085997451 2167047.846638926 2222074.2347340924 2368329.96093648 2321857.1431209957 1998945.4823719605 2267430.0972408657 2504322.850787943 2318017.532220653 2110386.5015314347 1.0877358646540123 1.0268488000024516 1.0529228807716546 1.1222256962020298 1.1002046977821853 0.9471940239010223 1.074414613434776 1.186665498936163 1.098385310244615 1.0 21.0090758112799 -7.011901765051291 24.948177896631673 1.111623257468823 1.0556336123471224 0.05456564709198597 0.06189752222911962 1122.6534607455144 2353272.981361896 0.02757703168312341 0.017083178480653223 9.729672785686911e-08 7.011901765051291 -0.05598964512170057 S(ph)VS(ph)GS(ph)PEPAAK ddPTM_KYSE-520_SHP099_60min_R1 2 SVSGSPEPAAK 11 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 S(1)VS(1)GS(1)PEPAAK;S(1)VS(1)GS(1)PEPAAK 157.52 6.2076e-05 1388030000.0 2327000.0 2187800.0 2069900.0 2237000.0 2050140.0 2219500.0 2028400.0 2099900.0 2652800.0 2032780.0 True False 2197916.6712405034 2082694.8040452525 2203329.065957096 2449603.807421427 2211474.3542990545 2205647.2772182785 2233450.467276293 2092615.937020344 2171118.391645965 2014771.1506789068 1.0909014011342593 1.0337128379783767 1.0935877582000575 1.2158223561003427 1.0976305440714027 1.094738365930569 1.1085380424092826 1.0386370364272917 1.077600496172667 1.0 20.94218454776443 -7.260415321794491 24.827551312863882 1.0435890715884424 1.1053956082337715 0.3038762549598 0.045767945792992586 118.50080149875114 2873070.239090301 0.024513285971881394 0.013152593107896042 5.490155915586246e-08 7.260415321794491 0.06180653664532909 S(ph)VS(ph)PCSNVESR ddPTM_KYSE-520_SHP099_60min_R1 9 SVSPCSNVESR 11 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(1)VS(0.947)PCS(0.053)NVESR;S(1)VS(0.977)PCS(0.023)NVESR;S(1)VS(0.918)PCS(0.082)NVESR;S(1)VS(0.989)PCS(0.011)NVESR;S(1)VS(0.99)PCS(0.01)NVESR;S(1)VS(1)PCSNVESR;S(0.974)VS(0.606)PCS(0.42)NVESR;S(1)VS(0.914)PCS(0.087)NVESR;S(1)VS(0.926)PCS(0.074)NVESR 164.65 1.8543e-05 11539179000.0 7199050.0 6367900.0 6220790.0 6036010.0 6366880.0 6219480.0 6052360.0 6463830.0 7383480.0 6192600.0 True False 6799704.345549612 6061976.525587233 6621792.077015912 6609670.575607419 6867917.233408233 6180661.9183210265 6664191.61414137 6441408.482399269 6042826.154384107 6137738.381769901 1.1078517725268089 0.9876563888080186 1.0788651560457074 1.0768902427055598 1.1189654570170477 1.0069933799522337 1.0857731626253608 1.0494758951491512 0.9845362865794836 1.0 22.54927572223723 -7.682107821900416 4.659045458098028 0.9922118021517969 1.0639507720647952 0.3581006577899476 0.038806068908473934 0.2207601591139323 8.423281065578548 0.028685738932335596 0.009674869679375121 2.0791804267660703e-08 7.682107821900416 0.07173896991299822 S(ph)VS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 3 SVSPPPK 7 0 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 S(1)VS(1)PPPK;S(1)VS(1)PPPK;S(1)VS(1)PPPK 94.69200000000001 0.0067548999999999994 4499600000.0 6613400.0 5678300.0 5069000.0 5324700.0 5634600.0 5785900.0 5059510.0 5828100.0 6453000.0 5661700.0 True False 6246541.518513944 5405505.944697935 5395755.850686762 5830757.88707057 6078010.96351149 5749788.051929365 5570974.646859136 5807883.681388773 5281297.866892113 5611541.742735949 1.1131595922992092 0.9632835667123524 0.9615460595426347 1.0390652256340056 1.083126748790451 1.0246360653687328 0.9927707753525443 1.0349889473613887 0.9411491723693705 1.0 22.41996576779082 -7.74922647577237 24.99962600932524 0.9705745780684031 1.0234053168386779 0.18249952072544173 0.0470263642844867 355.18570912067196 727068.8435832327 0.032811024223817174 0.012202381157078158 1.7814495353454367e-08 7.74922647577237 0.05283073877027478 S(ph)VS(ph)PPPKR ddPTM_KYSE-520_SHP099_60min_R1 9 SVSPPPKR 8 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR;S(1)VS(1)PPPKR 88.441 0.0032084 111215760000.0 17477590.0 15147410.0 14358930.0 14764420.0 15721990.0 14955310.0 14471490.0 15382290.0 17583250.0 15205430.0 True False 16508073.241988113 14419705.686874073 15284529.6029003 16167626.037715254 16959221.16711355 14861968.36289944 15934409.437331963 15328932.426243482 14390575.03766168 15070721.719845526 1.0953737683477922 0.9568025974420205 1.014186970407212 1.0727837948480792 1.1253091578740517 0.9861484167230562 1.057308981848501 1.0171332674836626 0.9548696675031686 1.0 23.845245171838062 -7.561884713799875 5.321972638424216 0.9784599063403101 1.0413128820639308 0.23072993046913493 0.04814720757820912 0.30031187063713083 20.99198707742861 0.03425703998078253 0.012662118645350346 2.74230203662876e-08 7.561884713799875 0.0628529757236207 S(ph)VS(ph)PSPVPLLFQPDQNAPPIR ddPTM_KYSE-520_SHP099_60min_R1 3 SVSPSPVPLLFQPDQNAPPIR 21 0 Q02241-2;Q02241-3 Q02241-2 KIF23 Kinesin-like protein KIF23 2 S(0.875)VS(0.911)PS(0.214)PVPLLFQPDQNAPPIR;S(0.882)VS(0.919)PS(0.199)PVPLLFQPDQNAPPIR;S(0.815)VS(0.902)PS(0.283)PVPLLFQPDQNAPPIR 138.93 1.2259e-06 96903000.0 159763.0 161570.0 166072.0 152469.0 145788.0 152135.0 135588.0 143735.0 186370.0 145608.0 True False 150900.62791035534 153807.93467848573 176777.26684459488 166959.60791852366 157260.6861797489 151185.46903338726 149294.5582513597 143236.41683300133 152529.9060053748 144318.02640130973 1.0456117761113304 1.065756915569141 1.2249146641807913 1.1568867180476385 1.0896815186652367 1.0475854805066487 1.03448309247392 0.9925053744478134 1.056901274281773 1.0 17.138891988926336 -6.251418583503736 2.2540602814025243 1.0219112284462506 1.125817923289644 0.47289852792719467 0.04890165277013915 0.299663804130637 2.993072239935862 0.020653333998142637 0.01917193610180904 5.605074849627961e-07 6.251418583503736 0.10390669484339332 S(ph)VS(ph)RS(ph)PVPEK ddPTM_KYSE-520_SHP099_60min_R1 7 SVSRSPVPEK 10 1 Q13243-3;Q13243 Q13243-3 SRSF5 Serine/arginine-rich splicing factor 5 3 S(1)VS(1)RS(1)PVPEK;S(1)VS(1)RS(1)PVPEK;S(1)VS(1)RS(1)PVPEK;S(1)VS(1)RS(1)PVPEK;S(1)VS(1)RS(1)PVPEK;S(1)VS(1)RS(1)PVPEK;S(1)VS(1)RS(1)PVPEK 133.47 0.00057852 9321820000.0 16719660.0 14705500.0 12032610.0 15812190.0 14011890.0 14348360.0 14939720.0 15568270.0 15161600.0 14162740.0 True False 15792187.129984107 13999025.70659448 12808251.29345669 17314975.783491742 15114546.026251538 14258806.562986115 16449972.695216391 15514267.30503154 12408635.632833028 14037269.142044974 1.1250184754727495 0.9972755786710717 0.912446086475105 1.233500306097947 1.0767440499505607 1.0157820882893513 1.1718784137254157 1.1052197651865634 0.883977895363294 1.0 23.742758960364352 -7.753565562312859 24.998304096259144 0.941988935786596 1.0773740357935804 0.2735670409656399 0.0897181204230334 215.01823545922252 682669.1769822026 0.06420268800612289 0.02328153547564466 1.7637394853191212e-08 7.753565562312859 0.13538510000698434 S(ph)VSDPVEDKK ddPTM_KYSE-520_SHP099_60min_R1 1 SVSDPVEDKK 10 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 S(0.974)VS(0.026)DPVEDKK 141.58 0.00015098 383000000.0 235720.0 232890.0 193470.0 263860.0 262570.0 281140.0 317120.0 335620.0 319830.0 308670.0 True False 222644.14170382996 221701.61482498294 205941.38576294508 288937.17506759794 283232.765181062 279385.30097641196 349177.5843929488 334455.81255429675 261756.9342581907 305935.4239416262 0.7277488132473061 0.7246680098976853 0.6731531220204156 0.9444384417632147 0.9257926445127976 0.9132165781159094 1.1413440780874506 1.0932235575900893 0.8555953765855341 1.0 18.22286763914936 -5.45095117512464 1.6600727435564635 1.0061351187695573 0.7019292450737856 0.6849727851076741 0.08367296505250198 0.21918135171096575 1.2029584049952342 0.028861227473071807 0.05129305861648556 3.540371409159657e-06 5.45095117512464 -0.3042058736957717 S(ph)VSGFLHFDTATK ddPTM_KYSE-520_SHP099_60min_R1 1 SVSGFLHFDTATK 13 0 Q92621 Q92621 NUP205 Nuclear pore complex protein Nup205 1 S(0.981)VS(0.019)GFLHFDTATK 163.23 6.512100000000001e-07 76509000.0 172380.0 171960.0 151340.0 237140.0 136700.0 161230.0 147390.0 160450.0 179910.0 163220.0 True False 162817.73776898958 163698.78348277777 161095.6185525614 259677.71430125923 147457.51228339548 160223.70376476826 162289.6195877799 159893.4363993115 147242.87916202718 161773.9977832384 1.0064518402218736 1.0118979918028508 0.9958066238086918 1.6051882123182888 0.9115031729695793 0.9904169147099439 1.0031872971652243 0.9883753791728219 0.9101764262469331 1.0 17.303620213948836 S(ph)VSGS(ph)PEPAAK ddPTM_KYSE-520_SHP099_60min_R1 2 SVSGSPEPAAK 11 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.99)VS(0.01)GS(1)PEPAAK;S(0.998)VS(0.003)GS(0.999)PEPAAK 173.72 3.3283e-07 1792340000.0 6225300.0 6080700.0 5451400.0 5640000.0 5958000.0 5977600.0 5475700.0 5884600.0 7357400.0 5580300.0 True False 5879970.199172111 5788574.044683219 5802805.966548396 6176023.9042721735 6426860.7036172 5940291.581121857 6029237.193682109 5864187.696075971 6021481.624960796 5530862.883407699 1.0631198644992115 1.046595109426531 1.049168292339431 1.1166474444340184 1.1619996443769105 1.074026188380555 1.09010787661533 1.0602663308953526 1.0887056417588885 1.0 22.399073145715423 -10.040017202913958 13.61567876513688 0.9999999999225291 1.0838447077837299 0.3643580682904233 0.033043786531696435 0.0 0.0 0.03531942048097696 0.008566217722274809 9.119747142520422e-11 10.040017202913958 0.0838447078612008 S(ph)VSHGSNHTQKPDEQR ddPTM_KYSE-520_SHP099_60min_R1 7 SVSHGSNHTQKPDEQR 16 1 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.994)VS(0.006)HGSNHTQKPDEQR;S(0.997)VS(0.003)HGSNHTQKPDEQR;S(0.499)VS(0.499)HGS(0.001)NHT(0.001)QKPDEQR;S(0.982)VS(0.017)HGSNHTQKPDEQR;S(0.919)VS(0.081)HGSNHTQKPDEQR;S(0.983)VS(0.017)HGSNHTQKPDEQR;S(0.989)VS(0.01)HGS(0.001)NHTQKPDEQR 281.15 2.0456e-31 2964369000.0 1163646.0 1360359.0 1982251.0 1437701.3 898560.0 1219997.0 941552.0 931025.2 1114124.0 1220947.0 True False 1099096.2367092099 1295005.3116995124 2110030.0711737373 1574339.999291344 969271.5598929615 1212382.5461880898 1036733.2648219907 927795.6908841153 911827.1663804909 1210130.3594623911 0.908246147297297 1.070137032406019 1.743638654029912 1.30096727760037 0.8009645839507465 1.0018611108366038 0.8567120531399334 0.76669069875769 0.753494992709361 1.0 20.206731037336308 -5.758644837106516 24.992475912625935 0.8582216842802559 1.2773388575823816 0.4439268810172091 0.21459625554263315 70.20693403770444 627876.9661172011 0.06888407617403827 0.08497684856556935 1.74323189309e-06 5.758644837106516 0.4191171733021257 S(ph)VSPPK ddPTM_KYSE-520_SHP099_60min_R1 2 SVSPPK 6 0 O95696-2 O95696-2 1 S(0.996)VS(0.004)PPK;S(0.999)VS(0.001)PPK 91.041 0.029955000000000002 621560000.0 4716500.0 3685700.0 3338100.0 3857700.0 3653100.0 3436400.0 3241900.0 3298300.0 3058600.0 3054500.0 True False 4454866.342890346 3508633.4396515107 3553279.2671488402 4224334.6481401995 3940578.186704257 3414952.1529321424 3569622.8898949954 3286858.96712901 2503235.341031494 3027439.5063650417 1.4714964026611301 1.1589441943512935 1.1736912528485695 1.395348986910802 1.3016207849634605 1.1280001287399384 1.1790897497340707 1.0856893953516005 0.8268490041728549 1.0 21.529666701914596 -7.159783391199614 1.1312055836369386 0.9230545783118229 1.2833948718947008 0.6318954163991248 0.10763129803215184 0.3435937690995223 0.7890509800837074 0.0905204608028166 0.03754338999232229 6.921761147335901e-08 7.159783391199614 0.3603402935828779 S(ph)VSPPPKR ddPTM_KYSE-520_SHP099_60min_R1 5 SVSPPPKR 8 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.865)VS(0.135)PPPKR;S(0.851)VS(0.149)PPPKR;S(0.5)VS(0.5)PPPKR;S(0.915)VS(0.085)PPPKR;S(0.999)VS(0.001)PPPKR 125.97 0.00056494 15556760000.0 7625050.0 7614460.0 6432960.0 6651410.0 7399640.0 7966620.0 6715400.0 7031240.0 9894600.0 6599480.0 True False 7202073.276339668 7248649.912062521 6847638.894699928 7283558.006580669 7981949.569807652 7916897.369512349 7394258.167988168 7006850.269543757 8097990.062567917 6541013.741517743 1.1010637740486593 1.1081844800375824 1.0468773137160599 1.1135212819306248 1.2202924325237026 1.2103471544879147 1.1304452887867567 1.0712177877060878 1.2380328772538094 1.0 22.641082814607497 -5.529255047332569 24.88178160538632 1.152583211724248 1.086413307397058 0.12602662630120431 0.06918571260696922 275.11270794493925 1073547.174063141 0.019885828271325824 0.025742197898690904 2.9562758299218372e-06 5.529255047332569 -0.06616990432718994 S(ph)VSPSPVPLLFQPDQNAPPIR ddPTM_KYSE-520_SHP099_60min_R1 2 SVSPSPVPLLFQPDQNAPPIR 21 0 Q02241-2;Q02241-3 Q02241-2 KIF23 Kinesin-like protein KIF23 1 S(0.412)VS(0.327)PS(0.261)PVPLLFQPDQNAPPIR;S(0.487)VS(0.487)PS(0.026)PVPLLFQPDQNAPPIR 104.88 0.00011433 117066000.0 192110.0 207653.0 188156.0 167055.0 182891.0 201242.0 172276.0 200761.0 230345.0 199765.0 True False 181453.2753382096 197677.03818649263 200284.83682024406 182931.85697308282 197283.48119255682 199985.97403107042 189691.33933173443 200064.6069489698 188520.15452491297 197995.23751481832 0.9164527269229358 0.9983928940295754 1.011563911001922 0.9239204905592331 0.9964051846337555 1.010054466669195 0.9580601115091851 1.0104516121707048 0.952144894448806 1.0 17.595106203244793 S(ph)VSPTFLNPSDENLK ddPTM_KYSE-520_SHP099_60min_R1 1 SVSPTFLNPSDENLK 15 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 S(0.497)VS(0.497)PT(0.005)FLNPSDENLK 111.74 0.00019307 2085100000.0 869490.0 889440.0 617210.0 478600.0 662210.0 867560.0 638280.0 733880.0 949950.0 785500.0 True False 821257.6564146566 846709.9673233414 656996.344170916 524086.00010366354 714322.1595405078 862145.2362349579 702803.5714124985 731334.341568879 777463.0262907437 778541.0811097522 1.0548674647251948 1.0875597805531592 0.843881408588506 0.6731642206428183 0.9175137662900138 1.1073856693676771 0.902718672739407 0.9393651270481661 0.9986152884604731 1.0 19.570413642128546 -6.031213074883227 24.734059082185013 0.9839576419695819 0.9062835891693606 0.08834613322076401 0.11724838679912682 1719.2515980137534 1362376.2556785527 0.04305110270653894 0.04310019079172815 9.306511645278849e-07 6.031213074883227 -0.07767405280022133 S(ph)VSQDLIK ddPTM_KYSE-520_SHP099_60min_R1 1 SVSQDLIK 8 0 E7EPK0;E9PDJ9;H0Y8P3;G5EA03;Q9UPQ0-9;Q9UPQ0-8;Q9UPQ0-6;Q9UPQ0-5;Q9UPQ0-10;Q9UPQ0-2;Q9UPQ0-4;Q9UPQ0;Q9UPQ0-3;D6RD46 E7EPK0 LIMCH1 LIM and calponin homology domains-containing protein 1 1 S(0.999)VS(0.001)QDLIK 75.819 0.016127000000000002 437510000.0 727790.0 685410.0 555110.0 469400.0 514430.0 666680.0 518960.0 642020.0 748170.0 713140.0 True False 687418.0378866035 652481.8747786152 590893.2788074033 514011.6348697437 554912.7142936883 662519.0028276109 571421.5413615193 639792.9824685948 612321.1878308804 706822.134414524 0.9725474124491117 0.9231203198228647 0.8359858160028519 0.7272149665990733 0.7850811219336453 0.9373206788103626 0.8084375312253628 0.9051682896129861 0.8663016592400283 1.0 19.430987693599207 -9.530825021301624 7.919172372652466 0.999999999958599 0.8589959444514551 0.2485723088990257 0.07158291738299473 0.0 0.0 0.07418175783313491 0.017991718868304512 2.9456081901343735e-10 9.530825021301624 -0.1410040555071439 S(ph)VSRS(ph)PVPEK ddPTM_KYSE-520_SHP099_60min_R1 2 SVSRSPVPEK 10 1 Q13243-3;Q13243 Q13243-3 SRSF5 Serine/arginine-rich splicing factor 5 2 S(0.989)VS(0.106)RS(0.905)PVPEK;S(0.992)VS(0.045)RS(0.963)PVPEK 73.758 0.030402 0.0 2220900.0 2103290.0 1573610.0 2137750.0 2129270.0 2408600.0 2084100.0 2288300.0 2856700.0 1941590.0 True False 2097702.249745613 2002244.7912973454 1675047.4184650234 2340921.117262027 2296831.4351109425 2393567.033975197 2294781.1668559075 2280362.4213932366 2337995.2915466754 1924389.0231341647 1.0900614296423188 1.0404573956862322 0.870430769625234 1.216449007513811 1.1935380047897997 1.2438062185975804 1.1924725922196864 1.1849799567445642 1.214928615493186 1.0 20.875969044634815 -5.284359225686068 24.996182218934877 1.1897216765506529 1.0043306056700412 0.49400426985007506 0.08179114130113398 575.2792957706946 627393.1334815696 0.02206196252050423 0.03274787598263354 5.195660608705602e-06 5.284359225686068 -0.18539107088061169 S(ph)VSSMSEFESLLDCSPYLAGGDAR ddPTM_KYSE-520_SHP099_60min_R1 4 SVSSMSEFESLLDCSPYLAGGDAR 24 0 O94964-2;H0YDM2;O94964-3;O94964;X6R3R3;O94964-4 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 S(0.491)VS(0.491)S(0.018)MSEFESLLDCSPYLAGGDAR;S(0.94)VS(0.059)S(0.001)MSEFESLLDCSPYLAGGDAR;S(0.462)VS(0.462)S(0.075)MS(0.002)EFESLLDCSPYLAGGDAR;S(0.303)VS(0.303)S(0.303)MS(0.09)EFESLLDCSPYLAGGDAR 262.71 1.0601e-37 122054000.0 46500.2 46811.4 35342.799999999996 36294.2 38126.4 38503.1 38892.7 42476.5 51185.0 44434.7 True False 43920.74121014944 44562.51007865608 37621.05343847939 39743.58985575085 41126.73077045831 38262.78787090026 42824.353672173485 42329.15893558964 41891.094268847526 44041.04312767347 0.9972684135301865 1.011840476835912 0.8542271201301306 0.9024216284009339 0.9338273539805434 0.8687984015269066 0.9723737366534929 0.9611297991484641 0.9511830622950207 1.0 15.426561019598397 -7.875112692135346 1.0021897071397259 0.9961515611968266 0.9304724186266434 0.13983109208916011 0.04841940337773111 1.0856973185869176 2.4193544334435386 0.0490887484978306 0.01672265269806018 1.333175450603719e-08 7.875112692135346 -0.06567914257018315 S(ph)VSSSPWLPQDGFDPSDYAEPMDAVVKPR ddPTM_KYSE-520_SHP099_60min_R1 4 SVSSSPWLPQDGFDPSDYAEPMDAVVKPR 29 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 S(0.49)VS(0.174)S(0.174)S(0.161)PWLPQDGFDPSDYAEPMDAVVKPR;S(0.25)VS(0.25)S(0.25)S(0.25)PWLPQDGFDPS(0.001)DYAEPMDAVVKPR;S(0.97)VS(0.025)S(0.004)S(0.001)PWLPQDGFDPSDYAEPMDAVVKPR;S(0.988)VS(0.011)S(0.001)SPWLPQDGFDPSDYAEPMDAVVKPR 162.19 3.5481e-10 790923000.0 347957.0 340330.0 273912.0 292360.0 275309.0 428658.0 463796.0 539738.0 607139.0 567674.0 True False 328655.13157491764 323980.0359542551 291568.80579469545 320145.8064987608 296974.25200606714 425982.5864193881 510681.02589276095 537865.7748537958 496897.8623286869 562644.8500036892 0.5841253706894548 0.5758162292823453 0.5182110985158465 0.5690015762103957 0.5278183067064773 0.7571074122807576 0.9076436510338849 0.955959651723941 0.8831465574161549 1.0 19.101865032953153 -6.530105096904935 2.3165776282604384 0.938321371300451 0.5535322022125608 0.9627133044396585 0.03541451645443543 0.05140362796898858 0.5549147387424656 0.014895890411182378 0.011514390332990346 2.9504951364750255e-07 6.530105096904935 -0.3847891690878902 S(ph)VSTLKPCAK ddPTM_KYSE-520_SHP099_60min_R1 2 SVSTLKPCAK 10 1 A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;F8VZV1 A0A286YFF8 MON2 Protein MON2 homolog 1 S(0.942)VS(0.058)T(0.001)LKPCAK;S(1)VSTLKPCAK 122.42 0.00031748 5845900000.0 4264600.0 4130600.0 3975900.0 3686600.0 3947100.0 3974000.0 3780500.0 3748300.0 5048700.0 4225600.0 True False 4028034.1367306677 3932159.7758429963 4232192.875664928 4036973.3555832896 4257714.314073083 3949196.791919547 4162669.8341244445 3735298.022159793 4131983.3473699447 4188164.4714670526 0.9617659870267001 0.9388742497177095 1.0105125776453696 0.9639003871710886 1.0166062825564413 0.9429421453776388 0.9939126943279576 0.8918699462753842 0.986585740727267 1.0 21.99788666811408 -9.28610897087064 14.55925060559607 1.0000004436364343 0.9670449504572948 0.0707471480244326 0.03537378828716921 0.0 0.0 0.033077311077246783 0.008022426316641271 5.174769730788491e-10 9.28610897087064 -0.03295549317913948 S(ph)VTPTKEFLKDEIK ddPTM_KYSE-520_SHP099_60min_R1 1 SVTPTKEFLKDEIK 14 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 S(0.496)VT(0.496)PT(0.009)KEFLKDEIK 78.508 0.0096315 400330000.0 754860.0 710380.0 587010.0 535990.0 604330.0 673110.0 588050.0 629420.0 830600.0 717980.0 True False 712986.4110238974 676252.2784978811 624849.6038492076 586930.3284487306 651887.3328326578 668908.8708125236 647495.8328149403 627236.688927733 679783.9777220817 711619.2557799876 1.0019211892213502 0.9503007022437279 0.8780673074456453 0.8247814033719638 0.9160619636664286 0.9399814091305748 0.9098908265280662 0.881421748825831 0.9552636078923806 1.0 19.4407460236063 -7.999832950576102 5.534694652736027 0.9999355046531127 0.9110643761336141 0.2768690100770532 0.044812292396157034 0.18469626120243646 22.72322363337229 0.04649023038261185 0.012087291717983147 1.0003847194988322e-08 7.999832950576102 -0.08887112851949852 S(ph)VVDMDLDDTDDGDDNAPLFYQPGKR ddPTM_KYSE-520_SHP099_60min_R1 3 SVVDMDLDDTDDGDDNAPLFYQPGKR 26 1 E7EMW7;O95071-2;O95071;E7ET84 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 S(1)VVDMDLDDTDDGDDNAPLFYQPGKR;S(1)VVDMDLDDTDDGDDNAPLFYQPGKR;S(1)VVDMDLDDTDDGDDNAPLFYQPGKR 208.86 1.4832e-21 689170000.0 304579.0 268057.0 279440.0 231149.0 219013.0 262021.0 264539.0 318242.0 403886.0 290621.0 True False 287683.3957068163 255179.1393582398 297453.1495198085 253117.33146251916 236248.07708649064 260385.62974724526 291281.1837718412 317138.092780241 330550.483537516 288046.3240397166 0.9987400348394994 0.8858961842646358 1.032657335626317 0.8787382804011019 0.8201739004102552 0.9039713685474513 1.0112303454762317 1.10099684082937 1.1475601524841497 1.0 18.135941321132584 -6.984562423893246 3.2094307335945094 1.091204814570601 0.9175522458559235 0.5502668636393446 0.06625591157358797 0.1861138040373919 3.9642251340259125 0.033471383786284406 0.019862155085390548 1.0361856562073496e-07 6.984562423893246 -0.1736525687146775 S(ph)VVGTPAYLAPEVLR ddPTM_KYSE-520_SHP099_60min_R1 4 SVVGTPAYLAPEVLR 15 0 F8WBA3;Q15139;H0Y5M6;O94806 F8WBA3;O94806 PRKD1;PRKD3 Serine/threonine-protein kinase;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase D3 1 S(1)VVGTPAYLAPEVLR;S(1)VVGTPAYLAPEVLR;S(1)VVGTPAYLAPEVLR;S(1)VVGTPAYLAPEVLR 214.53 3.9696e-14 3192620000.0 960490.0 825770.0 621333.0 618562.0 666240.0 720990.0 715220.0 837930.0 811550.0 919630.0 True False 907209.7050106549 786098.7696939611 661385.1193479502 677349.9465025535 718669.2976129433 716490.0339723389 787521.4174745372 835023.4164043323 664192.9775106618 911482.7936613127 0.9953119371200708 0.862439505343047 0.7256144865787852 0.7431297126100683 0.7884617269911793 0.7860708276173682 0.8640003113072073 0.9161153915480372 0.7286950254350733 1.0 19.79785589676398 -9.302946483187956 7.464559504079228 0.9999999993119811 0.8210396689200461 0.28914650778004625 0.0830405815327786 107572711.44581936 0.0 0.08358093765013816 0.020895234568216174 4.97798423412693e-10 9.302946483187956 -0.17896033039193504 S(ph)VVS(ph)DLEADDVK ddPTM_KYSE-520_SHP099_60min_R1 2 SVVSDLEADDVK 12 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 2 S(1)VVS(1)DLEADDVK;S(1)VVS(1)DLEADDVK 181.26 4.471e-07 124900000.0 756510.0 843570.0 705780.0 770660.0 808160.0 825190.0 855850.0 956620.0 962400.0 931130.0 True False 714544.8822347035 803043.6309756162 751275.7080879274 843903.2946926223 871757.5941986016 820039.6831213115 942367.6702910743 953301.7084967855 787652.4201297039 922880.9126081776 0.7742546979493917 0.870148705000425 0.8140548773131819 0.9144227420498332 0.944604642147062 0.8885650054282476 1.0211151378435432 1.0329628617007962 0.8534713519035723 1.0 19.815784970765062 -5.254976230739144 0.6889337810204773 0.9743786668446365 0.7776196495952273 0.5510558114446497 0.055914768215726454 0.8692457229392326 0.6970466661075744 0.02988194601679315 0.11162088725441409 5.559346831575598e-06 5.254976230739144 -0.19675901724940914 S(ph)VVS(ph)FDK ddPTM_KYSE-520_SHP099_60min_R1 2 SVVSFDK 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 2 S(1)VVS(1)FDK;S(1)VVS(1)FDK 118.28 0.0027531999999999995 638010000.0 2350400.0 2153100.0 2070340.0 2436300.0 2141290.0 1982750.0 2340900.0 3006400.0 2759600.0 2039740.0 True False 2220018.6265937635 2049661.844131011 2203797.429061124 2667845.219499693 2309797.340726496 1970374.9217862324 2577541.0169823887 2995971.5000990382 2258526.203854871 2021669.490493705 1.0981115543528435 1.0138461572323922 1.0900878899463147 1.3196248111001503 1.142519759826038 0.9746276189314476 1.2749566776876748 1.4819294222852433 1.1171589690970327 1.0 20.947115729077453 -6.803412117285109 24.998326144559087 1.258672278156585 1.1128421727481033 0.10024357910367787 0.14502565329647735 256.21009674570865 152592.6030319119 0.06078843583987202 0.04098392300468257 1.5724899652964162e-07 6.803412117285109 -0.14583010540848163 S(ph)VVS(ph)FDKVK ddPTM_KYSE-520_SHP099_60min_R1 7 SVVSFDKVK 9 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 2 S(1)VVS(1)FDKVK;S(1)VVS(1)FDKVK;S(1)VVS(1)FDKVK;S(1)VVS(1)FDKVK;S(1)VVS(1)FDKVK;S(1)VVS(1)FDKVK;S(1)VVS(1)FDKVK 129.34 0.00038961 9275610000.0 14611080.0 12999810.0 13619390.0 13770570.0 12799570.0 11304310.0 12724210.0 15637170.0 17355940.0 11795640.0 True False 13800574.265934126 12375279.614487369 14497317.671194488 15079320.832527163 13806823.3394088 11233755.608169109 14010497.323122509 15582928.307012923 14204538.803642882 11691139.806469055 1.1804301799810706 1.0585178023138309 1.2400260292133956 1.2898075878096442 1.180964693602336 0.9608777068898909 1.198385919170181 1.3328835823510061 1.2149832299313612 1.0 23.478912253874032 -6.984782772679314 24.99873577858227 1.217487083216519 1.1525188471619476 0.0 0.11587911357820255 753.199689184983 1237348.1694872992 0.04963353561391999 0.0334517250645376 1.0356600581427791e-07 6.984782772679314 -0.06496823605457136 S(ph)VVSFDK ddPTM_KYSE-520_SHP099_60min_R1 2 SVVSFDK 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.999)VVS(0.001)FDK;S(1)VVSFDK 76.1 0.027018 317380000.0 2294900.0 2033320.0 1979240.0 1897490.0 1866920.0 1904620.0 1696530.0 2078250.0 2387600.0 2095570.0 True False 2167597.322230271 1935636.2551244586 2106824.977295969 2077826.8790988277 2013835.9826782518 1892732.5600970828 1868031.8089372166 2071041.0358171978 1954072.026498002 2077004.880128788 1.0436168653084077 0.9319363058041714 1.0143572590765082 1.0003957616941124 0.969586543558521 0.9112797847541508 0.8993872988981068 0.9971286324993033 0.9408124387155203 1.0 20.98607317526568 -5.989521611615082 5.84922809549554 0.9456929944311523 0.9933356066555412 0.238500907015875 0.0396785045898117 0.2378530179575457 29.752857746474948 0.012523759140272185 0.013741331487821643 1.024420801217102e-06 5.989521611615082 0.047642612224388925 S(ph)WASPVYTEADGTFSR ddPTM_KYSE-520_SHP099_60min_R1 11 SWASPVYTEADGTFSR 16 0 E9PMS6;E9PJ10;E9PK58;E9PLU6;Q8WWI1-3;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(1)WASPVYTEADGTFSR;S(0.939)WAS(0.061)PVYTEADGTFSR;S(0.966)WAS(0.034)PVYTEADGTFSR;S(0.863)WAS(0.137)PVYTEADGTFSR;S(0.989)WAS(0.011)PVYTEADGTFSR;S(1)WASPVYTEADGTFSR;S(1)WASPVYTEADGTFSR;S(1)WASPVYTEADGTFSR;S(1)WASPVYTEADGTFSR;S(0.999)WAS(0.001)PVYTEADGTFSR;S(0.994)WAS(0.006)PVYTEADGTFSR 299.17 9.415100000000001e-38 23274690000.0 8752490.0 7809790.0 7408840.0 7923110.0 6812420.0 6975900.0 7324840.0 7475990.0 9338480.0 8118280.0 True False 8266971.932043759 7434595.9656662205 7886425.680963127 8676119.992230125 7348518.696632394 6932360.820521281 8065306.310749397 7450057.535599192 7642847.435923555 8046358.355126275 1.0274178165053927 0.9239702779245091 0.9801235954074484 1.078266665404311 0.9132726100808954 0.8615525824927653 1.0023548485894926 0.9258918391141274 0.9498517339902409 1.0 22.93990456103502 -5.84959878619402 22.595070347718497 0.9374281379877556 0.9953811282270512 0.23061415997430523 0.05290417749376839 16.132638404196054 4127.829541856022 0.0165813636270383 0.01880152181120054 1.4138430906271558e-06 5.84959878619402 0.057952990239295565 S(ph)WDQQIK ddPTM_KYSE-520_SHP099_60min_R1 4 SWDQQIK 7 0 F8W8D3;Q14493;E7EUV9;Q14493-2;H0YAE8 F8W8D3 SLBP Histone RNA hairpin-binding protein 1 S(1)WDQQIK;S(1)WDQQIK;S(1)WDQQIK;S(1)WDQQIK 157.96 0.0010945 7435500000.0 6904620.0 6463100.0 6378820.0 5656950.0 6233850.0 6347460.0 6092880.0 6028420.0 7167200.0 6718990.0 True False 6521606.964581267 6152602.974689122 6790008.943672859 6194584.827175969 6724418.52924539 6307843.14766927 6708807.771178447 6007508.818063805 5865817.150408984 6659464.975895122 0.9792989359035822 0.9238884800745018 1.0196027711310534 0.9301925679612624 1.0097535693310764 0.9471996880382137 1.0074094233488617 0.9021008203825436 0.8808240859650349 1.0 22.666974844574394 -7.273907052120045 24.970921812135646 0.9185968373679319 0.9724105153592352 0.1904938884620242 0.04241661375106347 1049.0710436410893 2101123.7724215393 0.021235241164525964 0.01030658371616927 5.3222215347818917e-08 7.273907052120045 0.05381367799130332 S(ph)WGHES(ph)PEER ddPTM_KYSE-520_SHP099_60min_R1 2 SWGHESPEER 10 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 2 S(1)WGHES(1)PEER;S(1)WGHES(1)PEER 150.49 0.00011538 357550000.0 1226010.0 1138370.0 1214350.0 1039030.0 1143090.0 1138950.0 1085340.0 1309420.0 1324480.0 1129200.0 True False 1158000.7813096568 1083680.996471795 1292628.9440286984 1137779.09880424 1233044.6797075835 1131841.3905779496 1195056.759097639 1304877.9276409256 1083987.819423722 1119196.1665043063 1.0346718617939452 0.9682672518943313 1.1549619116960448 1.0166038205420018 1.1017234660112099 1.0112984876575652 1.0677813191857826 1.1659063591296754 0.9685413977153319 1.0 20.09403149539668 -4.7121965074375645 24.999898456576588 1.0651351609780986 1.0014695869492243 0.11921229482132722 0.06371881470044387 210.2407731937783 106733.08383721908 0.015062888592528054 0.03985255040632511 1.940007873720639e-05 4.7121965074375645 -0.0636655740288743 S(ph)WGQQAQEYQEQK ddPTM_KYSE-520_SHP099_60min_R1 6 SWGQQAQEYQEQK 13 0 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(1)WGQQAQEYQEQK;S(1)WGQQAQEYQEQK;S(1)WGQQAQEYQEQK;S(1)WGQQAQEYQEQK;S(1)WGQQAQEYQEQK;S(1)WGQQAQEYQEQK 314.51 7.222099999999999e-40 3913040000.0 2795480.0 2638920.0 2388400.0 2520320.0 2739940.0 2653390.0 2505860.0 2748460.0 3171760.0 2636390.0 True False 2640409.1517487816 2512142.322100325 2542360.0855751173 2759850.455038162 2955557.6898739343 2636829.2087849523 2759176.7836368433 2738926.233755387 2595848.337562957 2613033.635680383 1.0104765264765796 0.9613892021126671 0.9729534479999666 1.0561863488295857 1.1310829104977689 1.0091064932267408 1.055928536839675 1.048178713184541 0.9934232388428664 1.0 21.317294264864987 -5.260075974700093 24.97056444161383 1.0469173084545655 0.9795846696924763 0.3314547421311792 0.03882579001818413 128.4630396860606 2352755.9976887484 0.010812638648508068 0.017567570306648593 5.494447465682111e-06 5.260075974700093 -0.06733263876208928 S(ph)WHDVQVSSAYVK ddPTM_KYSE-520_SHP099_60min_R1 2 SWHDVQVSSAYVK 13 0 O43399;O43399-5;O43399-7;A0A087WYR3 O43399 TPD52L2 Tumor protein D54 1 S(1)WHDVQVSSAYVK;S(1)WHDVQVSSAYVK 239.98 7.5366e-16 4223000000.0 3130000.0 2942990.0 2544070.0 3327400.0 2424520.0 2258320.0 2449430.0 2581850.0 3220300.0 2035750.0 True False 2956372.6604996934 2801604.3428819533 2708064.8228559215 3643635.0955807115 2615315.9303682363 2244224.9871987305 2697042.288533115 2572894.16495832 2635574.697156778 2017714.8387895355 1.4652083652580343 1.388503612612914 1.342144474925178 1.8058226194969136 1.2961771802883766 1.1122607338037334 1.336681594784286 1.2751525218012705 1.306217631198028 1.0 20.94429086382087 -5.9817487668108935 24.9841296491847 1.2284004633864274 1.4898553644920853 0.4669429398765649 0.1477006241576268 235.80270178762 322788.92581720115 0.04533638014119856 0.05139820949764087 1.042920569658456e-06 5.9817487668108935 0.26145490110565794 S(ph)WHEESPFEK ddPTM_KYSE-520_SHP099_60min_R1 1 SWHEESPFEK 10 0 Q9BY84 Q9BY84 DUSP16 Dual specificity protein phosphatase 16 1 S(0.998)WHEES(0.002)PFEK 209.19 6.463099999999999e-06 0.0 374440.0 303220.0 306700.0 367460.0 289420.0 309040.0 312950.0 292020.0 329120.0 304170.0 True False 353669.0667723658 288652.85605750076 326470.37273735064 402383.2879191223 312195.7074254595 307111.1667274328 344586.0400976712 291007.05077798036 269360.1044400333 301475.29044067883 1.1731278747767129 0.9574677103240037 1.0829092237049858 1.3347139904266851 1.035559852912357 1.0186943224385514 1.1429992806175777 0.96527662466998 0.8934732397016637 1.0 18.201680235037916 -7.34070585973159 5.534029496426564 0.9428643024679753 1.1023849910254684 0.33181185116479206 0.0997119994216797 0.2812499616233137 14.775688958559465 0.0579977170714255 0.02718987518835951 4.5634588661908615e-08 7.34070585973159 0.15952068855749313 S(ph)WIEEQAMGSFLSVAK ddPTM_KYSE-520_SHP099_60min_R1 4 SWIEEQAMGSFLSVAK 16 0 H0Y9Q1;P28838-2;P28838 H0Y9Q1 LAP3 Cytosol aminopeptidase 1 S(1)WIEEQAMGSFLSVAK;S(1)WIEEQAMGSFLSVAK;S(1)WIEEQAMGSFLSVAK;S(1)WIEEQAMGSFLSVAK 322.43 1.9964000000000002e-47 257570300.0 356415.0 365411.0 329154.0 388964.0 349881.0 366894.0 307779.0 340886.0 443640.0 315310.0 True False 336643.94945431215 347856.10706690716 350371.7935050212 425931.02161370934 377414.64414942684 364604.0784535812 338892.30495357444 339703.54602939036 363086.15925430326 312516.5987074677 1.0772034216634647 1.1130804203859876 1.1211301894175163 1.3629068771876773 1.2076627152297505 1.1666710823090396 1.0843977771266984 1.0869936106893672 1.1618139988595337 1.0 18.25357329216991 -6.71060859372358 5.014212163141222 1.09030858351719 1.1805767392916704 0.2304756899561391 0.08132472221415679 0.3451542089906664 18.510174023919905 0.03486757473003994 0.02606151724857294 1.9471141204072173e-07 6.71060859372358 0.09026815577448044 S(ph)WITIPR ddPTM_KYSE-520_SHP099_60min_R1 2 SWITIPR 7 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 S(1)WITIPR;S(0.999)WIT(0.001)IPR 90.64 0.0073503 150058000.0 358380.0 349530.0 367270.0 378690.0 392530.0 380570.0 380600.0 432710.0 504890.0 408650.0 True False 338499.946987182 332738.054144774 390944.8118527767 414680.5837427001 423419.87780981144 378194.72146472597 419074.7622980458 431209.0300052733 413214.7032411535 405029.6789248893 0.835741094049444 0.8215152406312392 0.9652250987890579 1.023827648490916 1.045404571175468 0.9337457009782739 1.0346766770534883 1.0646356364547764 1.0202084556815454 1.0 18.627668101122882 -4.867765151054945 3.2279033639399803 1.017758656999462 0.8252736320195418 0.8327528660860916 0.03331222204027898 0.0915110838409786 1.8661931080415015 0.009475063144328836 0.023557349950207408 1.3559224423226474e-05 4.867765151054945 -0.19248502497992026 S(ph)WNTECPSFPGERPLQVR ddPTM_KYSE-520_SHP099_60min_R1 1 SWNTECPSFPGERPLQVR 18 1 E5RHG3;E5RIU7;E5RGV8;E7EVI9;B4DMX9;Q14159 E5RHG3 SPIDR DNA repair-scaffolding protein 1 S(0.978)WNT(0.022)ECPSFPGERPLQVR 66.137 0.012937 378030000.0 60998.0 64150.0 67594.0 68337.0 72125.0 75320.0 73464.0 83905.0 92028.0 89270.0 True False 57614.31934350164 61068.1377088869 71951.21739422399 74831.72793373177 77800.82716488586 74849.89994146461 80890.4580595472 83613.95313857419 75318.03503709097 88479.13725100909 0.6511627614547582 0.6901981597722963 0.813199807657521 0.845755623966353 0.8793126784698453 0.8459610058032179 0.9142319938096443 0.9450132057839498 0.8512519151652553 1.0 16.433049697651917 -3.051976267524271 0.35172599768022883 0.942297350440182 3.211267785393384e-19 0.8602402234399993 0.03786125368871406 5.100882367007592 0.2595178213206281 0.03285433858618709 2.413354438806083 0.0008872044929298014 3.051976267524271 -0.942297350440182 S(ph)WPASPR ddPTM_KYSE-520_SHP099_60min_R1 3 SWPASPR 7 0 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 S(1)WPASPR;S(1)WPASPR;S(1)WPASPR 140.35 0.0017675 491890000.0 872060.0 817920.0 826500.0 827610.0 950140.0 914350.0 830150.0 901320.0 1051320.0 896730.0 True False 823685.0933914883 778625.8954770495 879777.5124467566 906265.8055699794 1024910.6124429078 908643.2024890878 914069.6634832453 898193.5312896688 860426.7896204906 888785.669845384 0.9267533459836039 0.8760558612657445 0.989864645994805 1.0196674365009015 1.1531583453873695 1.0223423186460223 1.0284477962412015 1.0105850732786021 0.9680925546090018 1.0 19.76147603035186 -4.937266391670352 3.433113030226432 1.0332070104586444 0.9016486601742473 0.5302093999499359 0.047044627443168424 0.17956169720007642 4.284787612478744 0.013503903606797351 0.030890410180167856 1.1554033125418007e-05 4.937266391670352 -0.1315583502843971 S(ph)WRPAGPSPR ddPTM_KYSE-520_SHP099_60min_R1 1 SWRPAGPSPR 10 1 K7EJX8 K7EJX8 DUS3L 1 S(1)WRPAGPSPR 57.55 0.037677999999999996 197900000.0 183670.0 180930.0 190220.0 137630.0 139320.0 191210.0 162820.0 172420.0 193420.0 149080.0 True False 173481.45896293243 172237.85121853306 202481.8855627613 150710.3138200317 150283.69137763476 190016.5874642517 179279.43457006782 171821.91526313033 158299.80372141217 147759.26718248505 1.1740817498010467 1.1656653048083716 1.3703498225440773 1.0199719902096027 1.0170847097666775 1.285987614093796 1.2133210863089545 1.1628503479983257 1.0713358744931334 1.0 17.172889090788477 -7.9068752895175844 2.6556205701619513 1.0016921986935283 1.1776524591771889 0.2530604477712546 0.1005183068947952 0.37157195413165156 5.445997411180705 0.10013446225727014 0.027344152983349114 1.2391523660993448e-08 7.9068752895175844 0.17596026048366054 S(ph)WTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SWTSPK 6 0 O75494;O75494-2 O75494 SRSF10 Serine/arginine-rich splicing factor 10 2 S(1)WT(0.02)S(0.98)PK 93.46700000000001 0.015066999999999999 2294500000.0 4870600.0 3914800.0 3356200.0 3909500.0 4199300.0 3900300.0 4099200.0 4445900.0 4368000.0 4067300.0 True False 4600418.108699611 3726727.1317654047 3572546.0221098633 4281057.704565967 4529761.019251374 3875956.780957176 4513587.140336709 4430478.210580864 3574881.3083193502 4031266.8863115124 1.1411842079522687 0.9244555711307042 0.8862092545251041 1.061963354275213 1.1236569413532351 0.9614736236189908 1.119644833157277 1.0990287508933991 0.8867885479024334 1.0 21.942801867971454 -4.228407879187215 22.87674552973589 1.0138012384075763 1.14118496341767 0.1716512340026578 0.08727983965180977 8980.854419291856 6219569.072129012 0.02255889403147313 2.84353319392028 5.910063141814984e-05 4.228407879187215 0.12738372501009376 S(ph)WTSPK ddPTM_KYSE-520_SHP099_60min_R1 8 SWTSPK 6 0 O75494;O75494-2 O75494 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.97)WT(0.029)S(0.001)PK;S(0.998)WTS(0.002)PK;S(0.897)WT(0.036)S(0.068)PK;S(0.984)WT(0.012)S(0.004)PK;S(0.843)WT(0.156)SPK;S(0.992)WT(0.008)SPK;S(0.991)WT(0.008)S(0.001)PK;S(0.986)WT(0.012)S(0.002)PK 113.5 0.0087335 71892200000.0 33542400.0 28497430.0 27011820.0 27749560.0 30027730.0 29004230.0 28245170.0 29261360.0 32722300.0 28697590.0 True False 31681736.20688332 27128370.687285528 28753045.13764009 30386869.83919053 32390741.51658728 28823203.84199714 31100467.429894682 29159859.1718128 26780755.1820555 28443351.678987205 1.1138538300424172 0.953768423407248 1.010888078948926 1.0683294353681645 1.138780755592747 1.0133546906601218 1.0934178145000557 1.0251906843086611 0.9415470962882351 1.0 24.76158814202909 -7.5756981757534785 5.964172168086341 0.9727418745154703 1.0529023349724898 0.2893521169793216 0.052784595821510856 0.2701525113146578 20.761947014707975 0.037354087322191386 0.0137738994021437 2.6564510903838056e-08 7.5756981757534785 0.08016046045701941 S(ph)Y(ph)EMS(ph)QVKHK ddPTM_KYSE-520_SHP099_60min_R1 1 SYEMSQVKHK 10 1 H0YAZ7;Q8N412 H0YAZ7 STPG2 Sperm-tail PG-rich repeat-containing protein 2 3 S(1)Y(1)EMS(1)QVKHK 42.348 0.040154 597090000.0 876730.0 853580.0 820610.0 808130.0 803270.0 809600.0 797740.0 795850.0 989060.0 669580.0 True False 828096.0391820752 812572.7355502985 873507.8336224223 884934.4322268558 866482.7790188956 804546.9860941288 878383.3443921258 793089.3821027864 809471.6361736128 663648.0421253578 1.2477939911192482 1.2244031233001211 1.316221518299038 1.3334393775845703 1.3056360058623122 1.2123097410451733 1.32356804908076 1.195045162135773 1.2197303160591713 1.0 19.340058802604055 -8.486577424901052 0.7686876664608776 0.9973279808309536 1.2821747270030512 0.7815050670365362 0.04357109203790993 0.7433090151881986 0.7313599669175191 0.04775574586252859 0.015829927414817754 3.261538993342393e-09 8.486577424901052 0.2848467461720976 S(ph)Y(ph)SPAHNR ddPTM_KYSE-520_SHP099_60min_R1 2 SYSPAHNR 8 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 S(0.618)Y(0.763)S(0.618)PAHNR;S(0.915)Y(0.637)S(0.448)PAHNR 89.88600000000001 0.016694999999999998 5044800000.0 670770.0 612870.0 556670.0 567270.0 560600.0 595140.0 569290.0 583810.0 651120.0 580050.0 True False 633561.0509531562 583426.8052633747 592553.8389034924 621183.1702440558 604716.0306223233 591425.5105040261 626839.3889349832 581784.8993722778 532893.0213994721 574911.2082720717 1.1020154796726958 1.0148120211760998 1.0306875746681765 1.080485405930869 1.051842479188798 1.028724961340707 1.090323827254968 1.0119560916560757 0.9269136063656028 1.0 19.132979631750953 -7.531364032702216 6.57876456509612 0.9645078684273588 1.0538747697796353 0.5908553850323288 0.031201019261271213 0.09475000920208314 19.753345770525122 0.019328201856073642 0.007659742102807445 2.9419546057652784e-08 7.531364032702216 0.08936690135227654 S(ph)YDLTPVDK ddPTM_KYSE-520_SHP099_60min_R1 1 SYDLTPVDK 9 0 Q8WVM8-2;Q8WVM8-3;Q8WVM8 Q8WVM8-2 SCFD1 Sec1 family domain-containing protein 1 1 S(1)YDLTPVDK 139.86 0.0012940999999999999 0.0 311640.0 244670.0 247220.0 217150.0 271250.0 262480.0 285570.0 258440.0 300330.0 281570.0 True False 294352.70796106226 232915.68594284286 263156.19676598586 237787.87071147206 292595.8317986177 260841.76495798738 314438.20249462186 257543.53196034924 245797.64270319388 279075.50885814533 1.0547421705524234 0.8345973707826665 0.9429569719059393 0.8520556736934596 1.0484468271536675 0.9346637618802078 1.1267137119311013 0.9228453367839567 0.8807567661845 1.0 18.090295996192122 -5.762532932472183 24.999982611951687 0.9862250941665999 0.916472215103631 0.12039057478703219 0.08501205780423185 61.330766096673365 1402106.5050533367 0.025384970200752078 0.030445852968159905 1.7276949647431053e-06 5.762532932472183 -0.0697528790629689 S(ph)YDNLTTACDNTVPLASR ddPTM_KYSE-520_SHP099_60min_R1 5 SYDNLTTACDNTVPLASR 18 0 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 S(0.58)Y(0.416)DNLT(0.003)T(0.001)ACDNTVPLASR;S(0.999)YDNLT(0.001)TACDNTVPLASR;S(1)YDNLTTACDNTVPLASR;S(1)YDNLTTACDNTVPLASR;S(1)YDNLTTACDNTVPLASR 324.63 1.7164000000000002e-47 2434130000.0 894331.0 810069.0 764650.0 798900.0 713875.0 838420.0 704477.0 854953.0 910440.0 867577.0 True False 844720.676625351 771152.0693016417 813940.5624832575 874827.2158019566 770052.9011068688 833187.109783892 775692.4101929603 851987.3675905296 745127.046324696 859890.942744692 0.9823579184693829 0.8968021768437239 0.9465625488335008 1.0173699620670378 0.8955239121939481 0.9689450933445539 0.9020823125744554 0.9908086307678333 0.8665366842291882 1.0 19.71379417339315 S(ph)YDSSMESR ddPTM_KYSE-520_SHP099_60min_R1 1 SYDSSMESR 9 0 Q9HCG8;B7WP74 Q9HCG8 CWC22 Pre-mRNA-splicing factor CWC22 homolog 1 S(1)YDSSMESR 115.7 0.0016940999999999998 652150000.0 1225500.0 1258100.0 1224700.0 1002600.0 1151300.0 1216400.0 1161300.0 1021800.0 1556000.0 1094300.0 True False 1157519.072026318 1197658.9875533993 1303646.1215892849 1097886.8025573185 1241900.759999072 1208807.9963993295 1278695.5371957994 1018255.6142899122 1273469.6235679728 1084605.3533525178 1.067226036132335 1.1042348111701943 1.201954349164617 1.0122454210314817 1.145025475082115 1.1145141342543636 1.1789500515033864 0.9388259159356733 1.1741317887023839 1.0 20.048738765605044 -9.002589487260579 0.43745151469900856 0.9864849210210034 1.113205834533207 0.13176220130449623 0.07725217064143525 8.447209715043071 2.1102046769825353 0.29155584137676055 0.045218754760234736 9.940552257495806e-10 9.002589487260579 0.1267209135122036 S(ph)YDVPPPPMEPDHPFYSNISK ddPTM_KYSE-520_SHP099_60min_R1 20 SYDVPPPPMEPDHPFYSNISK 21 0 P18669;Q8N0Y7 P18669 PGAM1;PGAM4 Phosphoglycerate mutase 1;Probable phosphoglycerate mutase 4 1 S(1)YDVPPPPMEPDHPFYSNISK;S(0.994)Y(0.006)DVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(0.998)Y(0.002)DVPPPPMEPDHPFYSNISK;S(0.999)Y(0.001)DVPPPPMEPDHPFYSNISK;S(0.999)Y(0.001)DVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(0.999)Y(0.001)DVPPPPMEPDHPFYSNISK;S(0.999)Y(0.001)DVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK;S(1)YDVPPPPMEPDHPFYSNISK 237.63 1.3572e-26 154991440000.0 27572190.0 29024840.0 29438850.0 33405690.0 26113300.0 26605320.0 25961680.0 24476290.0 32651570.0 27687190.0 True False 26042705.65690194 27630443.11922699 31336525.37482537 36580556.73381307 28168268.14564737 26439266.32913763 28586139.97597984 24391387.462799054 26722867.967097238 27441903.03690789 0.94901237796358 1.0068705177649495 1.1419224582449483 1.3330182197865135 1.0264691959505343 0.9634632952961839 1.041696705127666 0.8888373167849891 0.9737979152231685 1.0 24.709877196987208 -5.99154951823752 24.99841012214129 0.973547319100983 1.1125469358538167 0.28538372828007175 0.10000159163182186 268.0833794142774 793044.5351287146 0.033697146976738965 0.03815002892499994 1.019648493140611e-06 5.99154951823752 0.13899961675283368 S(ph)YEDMIGEEVPSDQYYWAPLAQHER ddPTM_KYSE-520_SHP099_60min_R1 4 SYEDMIGEEVPSDQYYWAPLAQHER 25 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12 O60716-5 CTNND1 Catenin delta-1 1 S(0.996)Y(0.004)EDMIGEEVPSDQYYWAPLAQHER;S(0.977)Y(0.023)EDMIGEEVPSDQYYWAPLAQHER;S(0.883)Y(0.117)EDMIGEEVPSDQYYWAPLAQHER;S(1)YEDMIGEEVPSDQYYWAPLAQHER 229.96 3.1183e-22 402279000.0 197909.0 190563.0 150750.0 174174.0 171788.0 205641.0 205781.0 242367.0 316521.0 211939.0 True False 186930.59324818963 181408.06743910565 160467.5862085281 190727.4445926776 185306.7382599848 204357.51824034442 226583.35170902312 241526.28544588306 259048.76524508893 210061.3853460467 0.8898855586439538 0.86359550157332 0.7639080640365208 0.9079605196284927 0.8821551755203266 0.9728466652911674 1.0786530391378635 1.1497890725989564 1.2332050691674834 1.0 17.680451456581824 -6.602612731614914 1.4987927473548313 1.1443798185930925 0.8518346394188822 0.7769815385042271 0.06439187526628692 0.17106954383486941 0.7830799077239984 0.033489406384762326 0.02297240279758435 2.4968201950856627e-07 6.602612731614914 -0.2925451791742103 S(ph)YELPDGQVITIGNER ddPTM_KYSE-520_SHP099_60min_R1 8 SYELPDGQVITIGNER 16 0 P60709;A0A2R8Y793;Q6S8J3;P63267-2;A5A3E0;A0A2R8YEA7;Q9BYX7;P63261;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;POTEE;ACTG2;POTEF;POTEKP;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 1 S(1)YELPDGQVITIGNER;S(1)YELPDGQVITIGNER;S(1)YELPDGQVITIGNER;S(1)YELPDGQVITIGNER;S(1)YELPDGQVITIGNER;S(1)YELPDGQVITIGNER;S(1)YELPDGQVITIGNER;S(1)YELPDGQVITIGNER 250.27 1.7214000000000004e-23 4547159000.0 2933400.0 2816472.0 2257388.0 1977044.0 2163997.0 2712160.0 2330354.0 2614307.0 3023650.0 2707970.0 True False 2770678.4544120748 2681164.457509338 2402902.842428507 2164941.6673400467 2334291.252441338 2695232.4034153284 2565928.924383348 2605238.5792008396 2474631.3800136903 2683979.4925687797 1.0323023935478424 0.9989511711742821 0.895276155828128 0.8066163222685532 0.8697127749687973 1.0041926217684245 0.9560165908449442 0.9706626248129121 0.9220008524153339 1.0 21.355942217731737 -6.269204852537193 24.95612431792228 0.9678310777970941 0.917190005321242 0.13482733042241468 0.0628503040123744 1427.0081391653302 4586000.752588344 0.024771889363482145 0.022284044134118813 5.380159456990261e-07 6.269204852537193 -0.050641072475852145 S(ph)YS(ph)PAHNR ddPTM_KYSE-520_SHP099_60min_R1 8 SYSPAHNR 8 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 S(0.999)Y(0.12)S(0.881)PAHNR;S(0.999)Y(0.003)S(0.997)PAHNR;S(0.995)Y(0.112)S(0.893)PAHNR;S(0.994)Y(0.012)S(0.994)PAHNR;S(0.999)Y(0.01)S(0.992)PAHNR;S(0.998)Y(0.003)S(0.999)PAHNR;S(1)Y(0.018)S(0.982)PAHNR;S(1)Y(0.007)S(0.993)PAHNR 114.89 0.00072262 11330440000.0 3526110.0 3081670.0 2735420.0 3090360.0 3090570.0 3103680.0 3115970.0 3178820.0 3489510.0 2981370.0 True False 3330509.6491739843 2933621.9475190253 2911749.550026749 3384066.8852493847 3333780.2760621314 3084308.7818683623 3430962.656536637 3167793.415362163 2855902.947388611 2954957.381270759 1.1270922789897302 0.9927797829210795 0.9853778496035606 1.145216816560004 1.128199106082695 1.043774370966385 1.1610870188121547 1.0720267694689645 0.9664785575216823 1.0 21.494705892189682 -7.727510295878021 7.640859979007211 0.9832514469612079 1.0809767917100122 0.3154829402669602 0.058165876425603544 0.23047153813916613 42.810313973011894 0.043322571397690676 0.015621146627379446 1.8727926839418078e-08 7.727510295878021 0.09772534474880423 S(ph)YS(ph)PDGK ddPTM_KYSE-520_SHP099_60min_R1 3 SYSPDGK 7 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 S(0.998)Y(0.006)S(0.997)PDGK;S(0.999)Y(0.003)S(0.998)PDGK;S(0.999)Y(0.008)S(0.993)PDGK 81.771 0.010320999999999999 1026020000.0 4146900.0 3496730.0 3183660.0 3808400.0 3804900.0 3971900.0 4008600.0 3770900.0 4329000.0 3955600.0 True False 3916863.1903597955 3328741.842101264 3388883.817636106 4170349.190962789 4104323.983080404 3947109.898798501 4413828.408165921 3757819.628034673 3542962.7252093554 3920556.4614102324 0.9990579727426988 0.84904831109202 0.8643884741854011 1.0637135906627668 1.0468728160094065 1.0067728746288014 1.125816820038413 0.9584913940208828 0.9036887391069339 1.0 21.902627006098733 -5.258388848185099 24.997298986501356 1.01891760934869 0.8986532552386562 0.36096353380132795 0.06735417123646392 281.68862282354905 2308261.297706182 0.019147874277101663 0.0314473560675348 5.5158335463785595e-06 5.258388848185099 -0.12026435411003378 S(ph)YS(ph)PDGKES(ph)PSDKK ddPTM_KYSE-520_SHP099_60min_R1 6 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 3 S(0.902)Y(0.163)S(0.934)PDGKES(0.971)PS(0.029)DKK;S(0.905)Y(0.188)S(0.902)PDGKES(0.925)PS(0.08)DKK;S(0.816)Y(0.209)S(0.975)PDGKES(0.9)PS(0.1)DKK;S(0.979)Y(0.121)S(0.9)PDGKES(0.928)PS(0.072)DKK;S(0.975)Y(0.138)S(0.888)PDGKES(0.982)PS(0.018)DKK;S(0.8)Y(0.345)S(0.839)PDGKES(0.912)PS(0.105)DKK 108.49 0.00094108 10009600000.0 8258090.0 7450150.0 6671190.0 7316520.0 7104250.0 7622480.0 7196060.0 7900760.0 8473260.0 7303430.0 True False 7799997.28560571 7092233.611096856 7101225.581681399 8011879.861008059 7663314.057346843 7574905.274904606 7923507.971577707 7873354.107611248 6934729.577502292 7238727.292182555 1.0775371098769388 0.9797625086327116 0.9810047118849675 1.1068078044134178 1.0586548916717473 1.0464415869188919 1.0945995962763617 1.0876710490411838 0.9580039829641648 1.0 22.787304635325924 -1.1110765663000426 15.793653564063343 1.0424037924314415 1.0770000043396144 0.0 0.05201090482150665 0.0 0.0 0.012012997558758214 0.0 0.07743252718965783 1.1110765663000426 0.03459621190817286 S(ph)YS(ph)PRR ddPTM_KYSE-520_SHP099_60min_R1 1 SYSPRR 6 1 Q8IYB3;P62995;P62995-3;H7C2L4;H7BXF3;Q13595;Q13595-3;Q13595-4;J3KTL2;Q07955;J3KSR8 Q8IYB3;P62995;Q13595;J3KTL2 SRRM1;TRA2B;TRA2A;SRSF1 Serine/arginine repetitive matrix protein 1;Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha;Serine/arginine-rich splicing factor 1 2 S(0.793)Y(0.284)S(0.923)PRR 62.107 0.045854 2513900000.0 62149.0 58693.0 47246.0 45608.0 52934.0 58515.0 51117.0 53952.0 61585.0 47130.0 True False 58701.47107904003 55873.30018001093 50291.552756272766 49942.57060745479 57099.60464673927 58149.78617996285 56284.4052138445 53764.85310449148 50402.71643151264 46712.46486658517 1.2566553969416192 1.196111152335675 1.0766195468363697 1.0691486897575428 1.2223633415582045 1.244845168116126 1.2049119089433111 1.1509744402922975 1.0789992901352379 1.0 15.511519953074979 -7.919744708526614 2.1936214277653105 1.0016366347841814 1.1777333233012968 0.48705274653177844 0.06001280954413222 0.27871375535287685 2.923268985383553 0.06401836582953431 0.017856181209474385 1.2029713698886152e-08 7.919744708526614 0.17609668851711535 S(ph)YSEPEKMNEVGIVEEAEPAPLGPQR ddPTM_KYSE-520_SHP099_60min_R1 1 SYSEPEKMNEVGIVEEAEPAPLGPQR 26 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.36)Y(0.279)S(0.36)EPEKMNEVGIVEEAEPAPLGPQR 102.16 0.00013751 147020000.0 600550.0 632490.0 594600.0 497980.0 526230.0 563790.0 495020.0 526160.0 856600.0 581950.0 True False 567236.294333255 602104.2310131547 632928.8673936375 545307.8694768529 567641.3071608715 560271.1774827183 545061.4525296343 524334.8737666671 701063.0331287447 576794.3757502493 0.9834289621764051 1.043880204674299 1.097321496192422 0.945411211348167 0.9841311410544318 0.9713533991276546 0.944983993334992 0.9090499072302033 1.2154470684927474 1.0 19.137697571545395 -7.75281230016447 24.999999224873143 1.1077235592906427 0.987525420143906 0.33177331089132645 0.0696214281530458 194.78142876651222 564459.0491912067 0.04877094382058643 0.017793206124480605 1.7668012580902193e-08 7.75281230016447 -0.12019813914673672 S(ph)YSHDVLPK ddPTM_KYSE-520_SHP099_60min_R1 3 SYSHDVLPK 9 0 B7Z3B9;Q13480;Q13480-2 B7Z3B9 GAB1 GRB2-associated-binding protein 1 1 S(0.877)YS(0.123)HDVLPK;S(0.844)YS(0.156)HDVLPK;S(0.514)YS(0.485)HDVLPK 101.39 0.0029535 734480000.0 3052730.0 3149210.0 2621240.0 4638470.0 2897670.0 2922890.0 3327810.0 3447710.0 4289050.0 2917820.0 True False 2883388.9814336156 2997917.2245394187 2790209.3245322905 5079308.79419314 3125700.1435129964 2904647.1593190036 3664217.511095797 3435750.69871156 3510266.638151815 2891970.3848296064 0.9970326793659415 1.0366348287194007 0.964812551044394 1.7563488273730752 1.0808202462616716 1.0043834385565964 1.2670314780252119 1.1880310796868665 1.2137975743339566 1.0 21.46362134779639 S(ph)YSPAHNR ddPTM_KYSE-520_SHP099_60min_R1 6 SYSPAHNR 8 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.456)Y(0.087)S(0.456)PAHNR;S(0.489)Y(0.021)S(0.489)PAHNR;S(0.774)Y(0.002)S(0.225)PAHNR;S(0.585)YS(0.414)PAHNR;S(0.537)Y(0.003)S(0.461)PAHNR;S(0.567)Y(0.003)S(0.43)PAHNR 90.906 0.0028273000000000005 2222130000.0 889958.0 816620.0 792600.0 771471.0 817904.0 839439.0 762179.0 781093.0 1003297.0 808030.0 True False 840590.2556527116 777388.34942839 843692.2642048384 844791.3718887853 882268.3915628263 834199.749826914 839227.4914702118 778383.5706914772 821123.5558591749 800871.4828378272 1.0495944401393142 0.9706780252354267 1.0534677314458483 1.0548401210333165 1.1016354190020294 1.0416150002881746 1.0478928385569093 0.9719206981041879 1.0252875442007074 1.0 19.611211224001696 -7.240306705932836 24.183173023884873 0.9989530913704421 1.0454387365997964 0.3056032945691224 0.03219215081694369 671.3541333379038 768265.8038826516 0.016143158233743057 0.009307380866719273 5.750336956177284e-08 7.240306705932836 0.04648564522935428 S(ph)YSPDGKES(ph)PSDKK ddPTM_KYSE-520_SHP099_60min_R1 1 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 S(0.945)Y(0.001)S(0.055)PDGKES(0.607)PS(0.393)DKK 97.095 0.0013304999999999999 33356000000.0 2594200.0 2319700.0 2530700.0 2147800.0 2247300.0 2328000.0 1971600.0 2506800.0 3464400.0 2330600.0 True False 2450294.554590509 2208258.1300593154 2693832.9712631633 2351926.266240384 2424149.7246121056 2313470.0884722453 2170908.568961712 2498104.4958915184 2835352.290417025 2309952.697179365 1.0607552949385122 0.9559754763618205 1.1661853398784081 1.0181707483067823 1.0494369549524474 1.001522711394556 0.9398065040953276 1.081452663053188 1.227450368953102 1.0 21.13943187800296 -7.5202515718864245 24.914926933533454 1.127300633109263 1.0281467645302305 0.16879150744225024 0.07786380101308177 154.52591852680908 1465537.6194658414 0.04870797143029107 0.01910650216284934 3.018202872601382e-08 7.5202515718864245 -0.09915386857903252 S(ph)YSPDGKESPSDKK ddPTM_KYSE-520_SHP099_60min_R1 1 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.5)YS(0.5)PDGKESPSDKK 108.56 0.00018375 1153600000.0 2386600.0 2667200.0 2766900.0 2087200.0 2246600.0 2001700.0 1733500.0 1692100.0 3203400.0 1924200.0 True False 2254210.5404308503 2539063.708451179 2945258.80119653 2285566.860460438 2423394.6385945603 1989206.6478070866 1908739.0973296473 1686230.500039108 2621743.3111424446 1907153.0850049488 1.1819767160563313 1.331337126743861 1.544322175473862 1.1984181440025865 1.2706870033919022 1.0430241093110388 1.0008316124894057 0.8841610635754144 1.3746894949104946 1.0 20.862989221109792 -6.067758464337063 1.9857940299182801 1.0475445642517722 1.3367433813299767 0.3974473814683225 0.14987765917205867 0.3256024829207215 2.5572620346491415 0.05616813761103457 0.05884427770852031 8.555423959887812e-07 6.067758464337063 0.2891988170782045 S(ph)YSPDHR ddPTM_KYSE-520_SHP099_60min_R1 1 SYSPDHR 7 0 Q14241;A0A024RAC6 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 1 S(0.723)Y(0.002)S(0.274)PDHR 95.531 0.009895000000000001 170010000.0 512890.0 607990.0 531140.0 740190.0 481790.0 532760.0 501800.0 497880.0 598540.0 553990.0 True False 484438.9692791336 578781.2477884046 565378.1342540474 810537.4350537624 519704.13198988367 529434.8472227126 552526.8410960578 496152.9704860655 489860.2239655367 549082.0795976985 0.8822705880950847 1.0540887588472494 1.0296787224749506 1.476168072444883 0.9464962549327061 0.9642180411544644 1.0062736731471607 0.9036043770534031 0.8921438928118861 1.0 19.066662301221776 S(ph)YSPGR ddPTM_KYSE-520_SHP099_60min_R1 2 SYSPGR 6 0 J3QK89;Q8IWX8 J3QK89 CHERP Calcium homeostasis endoplasmic reticulum protein 1 S(0.949)Y(0.003)S(0.047)PGR;S(0.959)Y(0.003)S(0.038)PGR 90.777 0.024149 25889000000.0 742030.0 627780.0 649080.0 610340.0 623850.0 691030.0 724880.0 492920.0 698080.0 684680.0 True False 700868.1166998676 597620.5064830085 690920.7353647194 668346.5300945883 672943.445779051 686717.0254454366 798157.944547051 491210.1755683932 571326.2691647366 678614.26787298 1.0327930753602326 0.8806483075520429 1.0181347019571403 0.9848695521675745 0.9916435265770298 1.0119401520953186 1.1761585076139995 0.7238429824177168 0.8419013513457029 1.0 19.372232237484816 -7.273377044556265 24.999680617478493 0.837154138738431 1.0067615316581329 0.37552712256154763 0.0924782468192363 765.5977471920378 1603294.1443847027 0.04890600341284011 0.023776168294208602 5.328720672424435e-08 7.273377044556265 0.16960739291970184 S(ph)YT(ph)PEYR ddPTM_KYSE-520_SHP099_60min_R1 3 SYTPEYR 7 0 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 2 S(1)Y(0.038)T(0.962)PEYR;S(1)Y(0.004)T(0.996)PEYR;S(0.998)Y(0.343)T(0.659)PEYR 134.25 0.005303899999999999 4294670000.0 8128860.0 7186380.0 6442120.0 7971180.0 7344630.0 7243680.0 7314930.0 7954740.0 8141560.0 7716580.0 True False 7677935.931319327 6841135.517823705 6857389.362956439 8728758.550577343 7922610.595771722 7198469.506213334 8054394.511237116 7927146.863590281 6663257.936025746 7648217.104608399 1.0038857195480266 0.8944745454076624 0.8965997263368152 1.1412801743451906 1.0358767915986575 0.941195759450386 1.0531074629646662 1.0364699060142808 0.8712171536044433 1.0 22.86669204600271 S(ph)YTLVVAK ddPTM_KYSE-520_SHP099_60min_R1 6 SYTLVVAK 8 0 O43491;E9PHY5;O43491-4;E9PK52;A0A2R8Y5B3;O43491-2;E9PII3;O43491-3;E9PQN0;E9PRG1;E9PIG0;E9PQD2;E9PJP4 O43491 EPB41L2 Band 4.1-like protein 2 1 S(0.96)YT(0.04)LVVAK;S(0.998)Y(0.002)TLVVAK;S(0.992)YT(0.008)LVVAK;S(0.99)YT(0.01)LVVAK;S(0.999)YT(0.001)LVVAK;S(0.992)YT(0.008)LVVAK 195.79 3.9931e-06 4970020000.0 8103720.0 6872460.0 6465690.0 5925370.0 6612130.0 6293800.0 6884270.0 6445290.0 7873570.0 7606840.0 True False 7654190.497234691 6542296.705827239 6882478.722869777 6488515.383272555 7132467.013126604 6254518.059633428 7580199.195600551 6422932.793331999 6443928.164547612 7539449.315631972 1.0152187748467012 0.8677419837895483 0.9128622575391468 0.8606086614070798 0.9460196248469305 0.8295722668584797 1.0054048881108717 0.8519100698793697 0.8546948052541512 1.0 22.84602772164831 -4.2510989912628 23.935930918481674 0.899775670303025 1.0152188935246316 0.24052888278111884 0.059434284664586355 1077.7469919650905 2494678.1076700976 0.013636058369875755 0.17779290238136014 5.609201076832569e-05 4.2510989912628 0.1154432232216066 S(ph)YTMIGK ddPTM_KYSE-520_SHP099_60min_R1 1 SYTMIGK 7 0 B7WPD9;C9JFF0;A0A0G2JR66;Q2KJY2-2;Q9ULI4;Q2KJY2 B7WPD9 KIF26B;KIF26A Kinesin-like protein;Kinesin-like protein KIF26B;Kinesin-like protein KIF26A 1 S(0.999)YT(0.001)MIGK 71.692 0.026106 409340000.0 481180.0 612170.0 497830.0 949950.0 599970.0 402780.0 425570.0 474440.0 668470.0 451940.0 True False 454487.98619145085 582760.434314096 529920.9183561635 1040232.9623871186 647184.2256376657 400266.1006163449 468590.7687629519 472794.2783751286 547092.6987573807 447936.16320399963 1.0146266890812907 1.3009899226392545 1.1830277657551536 2.3222794849751267 1.4448135221065515 0.8935784459850704 1.0461106006963445 1.055494771829369 1.2213630952324408 1.0 18.772933618346425 -6.215110411929419 9.019277452537322 1.0471107029826245 1.478610540905675 0.2741462534532988 0.33215374988425944 0.6316668986070907 118.54101954001368 0.11668367480578959 0.11639412236661581 6.093819526266618e-07 6.215110411929419 0.43149983792305036 S(ph)YTPSK ddPTM_KYSE-520_SHP099_60min_R1 1 SYTPSK 6 0 O60493-4;O60493;O60493-2 O60493-4 SNX3 Sorting nexin-3 1 S(0.648)Y(0.005)T(0.338)PS(0.008)K 93.195 0.014418 908020000.0 1215500.0 1106600.0 950550.0 771080.0 851110.0 1025500.0 826440.0 1000600.0 1235400.0 1059300.0 True False 1148073.7919608222 1053437.274959537 1011823.9739337732 844363.2113663434 918087.51484653 1019099.4741100898 909984.6204771339 997129.1521417953 1011082.5018996627 1049915.42612293 1.0934916883737638 1.003354411935457 0.9637195042177648 0.8042202165600725 0.8744394948427353 0.9706491101605816 0.8667218309549706 0.9497233084991799 0.963013283492112 1.0 20.001841688427746 -4.573506463455599 2.0860121870623045 0.9141225424725278 1.0931707448820132 0.4778122196147271 0.05625611424212929 0.3355251562016387 2.4735634567722014 0.01572376235435131 0.08914911918275611 2.669891031762755e-05 4.573506463455599 0.17904820240948538 S(ph)YTSDLQK ddPTM_KYSE-520_SHP099_60min_R1 7 SYTSDLQK 8 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;E9PK58;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.985)YT(0.015)SDLQK;S(0.994)YT(0.004)S(0.002)DLQK;S(0.999)YT(0.001)SDLQK;S(0.997)YT(0.002)S(0.002)DLQK;S(1)YTSDLQK;S(0.994)Y(0.005)T(0.001)S(0.001)DLQK;S(0.997)YT(0.003)S(0.001)DLQK 148.91 0.00044303 8694870000.0 6606140.0 6262640.0 5151430.0 4372350.0 4148220.0 4974470.0 5182510.0 5094130.0 5641530.0 6495640.0 True False 6239684.2451864015 5961773.373985717 5483499.420379424 4787896.82940504 4474661.313856813 4943422.487544045 5706408.68722345 5076459.652008885 4617170.36339809 6438093.683131448 0.969181958556319 0.926015318728004 0.8517271866898781 0.7436823794518375 0.6950289222384174 0.7678394771570947 0.8863506758491109 0.7885035387586542 0.7171642089483121 1.0 22.618202139492638 -4.836034511122342 2.6178611640598564 0.7892176106727252 0.9578929785063397 0.3207700108354904 0.08441719498844744 0.2964627855808191 4.033965687774103 0.022760163656554627 0.06489829995883564 1.4586983405038068e-05 4.836034511122342 0.16867536783361448 S(ph)YTTPKK ddPTM_KYSE-520_SHP099_60min_R1 1 SYTTPKK 7 1 P62979;J3QTR3 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 1 S(0.488)Y(0.062)T(0.407)T(0.043)PKK 50.909 0.049296 5456400000.0 12621000.0 12926000.0 11659000.0 8744200.0 9491400.0 11824000.0 9506900.0 10185000.0 13442000.0 12293000.0 True False 11920887.970660258 12305015.557678442 12410557.795059575 9575246.138960408 10238319.181321291 11750202.030109897 10467950.230402762 10149670.61219687 11001271.64524468 12184093.583809279 0.978397604110758 1.0099245769114782 1.0185868739182398 0.7858808760041359 0.8403020799943943 0.9643886883570926 0.8591488696633948 0.8330263176642181 0.9029208097895456 1.0 23.538495592270444 -5.237129396863869 24.92107075886616 0.8772445327178748 1.0030651963506778 0.4469496807300696 0.060177667113548654 651.7303642473397 668112.2786001294 0.016078216494852145 0.02783064369856867 5.7925608293327174e-06 5.237129396863869 0.12582066363280298 SAADS(ph)ISESVPVGPK ddPTM_KYSE-520_SHP099_60min_R1 1 SAADSISESVPVGPK 15 0 P45974-2;P45974 P45974-2 USP5 Ubiquitin carboxyl-terminal hydrolase 5 1 S(0.013)AADS(0.542)IS(0.357)ES(0.088)VPVGPK 71.531 0.019821000000000002 365140000.0 298420.0 307690.0 271320.0 291370.0 197330.0 316920.0 240420.0 329060.0 363670.0 297010.0 True False 281866.0477144784 292908.1105478944 288809.7213273487 319061.71719641483 212858.74834588447 314941.9847244946 264723.9998730856 327918.56766318117 297636.6953746564 294378.72247028345 0.9574946359886178 0.9950043538811215 0.9810821886303386 1.0838477540734046 0.7230778996514323 1.0698530861254314 0.8992633626902453 1.1139343391106789 1.011067283929469 1.0 18.167313872407966 -7.259219898948245 24.985990992031105 1.0468756055061341 0.9608359679954211 0.1293787262575823 0.09843866488495827 386.5670106607044 4351853.049855633 0.04696469198343226 0.025404091459936395 5.505288732125703e-08 7.259219898948245 -0.08603963751071297 SAAEMYGS(ph)SFDLDYDFQR ddPTM_KYSE-520_SHP099_60min_R1 2 SAAEMYGSSFDLDYDFQR 18 0 P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;G3V5X6;G3V3K6;G3V251;B4DY08 P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SAAEMYGS(0.5)S(0.5)FDLDYDFQR;SAAEMYGS(0.5)S(0.5)FDLDYDFQR 349.81 1.3111999999999998e-59 93406000.0 149972.0 147512.0 124047.0 126474.0 132715.0 145009.0 121607.0 155346.0 162012.0 141499.0 True False 141652.75419823 140425.30209997398 132043.2681022174 138494.05093420524 143158.9154549439 144103.94504264247 133900.2223299488 154807.1409840291 132594.70479016352 140245.4289445562 1.0100347317147154 1.001282559843636 0.9415156636186597 0.9875120492444476 1.0207741994324786 1.027512597930102 0.9547564105129168 1.1038302078653106 0.9454476041610079 1.0 17.097594223905535 -5.6782819374672036 6.3503086313793835 1.0120926027533288 0.982678806766588 0.061133926312911036 0.04404785392257284 0.5406826044713532 33.13777873258224 0.012480739849456702 0.0161015332012014 2.097577725510144e-06 5.6782819374672036 -0.029413795986740765 SAAEMYGSS(ph)FDLDYDFQR ddPTM_KYSE-520_SHP099_60min_R1 2 SAAEMYGSSFDLDYDFQR 18 0 P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;G3V5X6;G3V3K6;G3V251;B4DY08 P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SAAEMYGS(0.317)S(0.683)FDLDYDFQR;SAAEMYGS(0.016)S(0.984)FDLDYDFQR 327.42 2.3463999999999998e-48 111120000.0 209939.0 208715.0 214138.0 201256.0 156871.0 185075.0 168855.0 210099.0 259557.0 210272.0 True False 198293.2651669793 198688.0181123978 227941.6781129144 220383.30973017693 169215.8552261049 183919.87827491443 185924.5112659922 209370.21560647502 212427.99169950667 208409.1536691404 0.9514614002117174 0.9533555250064719 1.0937220083662105 1.057455039043276 0.8119406093589501 0.8824942428723459 0.892112980609078 1.004611419030377 1.0192834045895431 1.0 17.669059118958497 -1.7768787594530107 17.396454713046666 0.9637500475430734 0.2859883579854523 0.0 0.08171936009015143 0.0 0.0 0.020491908801585097 0.0 0.01671557192246549 1.7768787594530107 -0.6777616895576211 SAAEMYGSVTEHPS(ph)PSPLLSSSFDLDYDFQR ddPTM_KYSE-520_SHP099_60min_R1 2 SAAEMYGSVTEHPSPSPLLSSSFDLDYDFQR 31 0 P07910;G3V2Q1;G3V576;G3V555;G3V575 P07910 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SAAEMYGSVTEHPS(0.98)PS(0.02)PLLSSSFDLDYDFQR;SAAEMYGSVTEHPS(0.609)PS(0.39)PLLSSSFDLDYDFQR 187.68 1.8893e-15 207107000.0 121212.0 192907.0 159417.0 207783.0 118681.0 174815.0 145119.0 194439.0 249170.0 183734.0 True False 114488.1287298685 183639.4581606898 169693.2748962183 227530.63384776327 128020.51949748104 173723.91474066832 159789.04474495587 193764.53649140362 203927.00906454475 182106.259702889 0.6286885959695115 1.008419251816507 0.9318365836137495 1.2494388398234377 0.7029990056703695 0.9539700338917692 0.8774494902352933 1.0640190886767726 1.119824268519143 1.0 17.474420988663155 -4.2590492881148 24.481436834122434 0.9844869662406887 0.6286884265214551 0.3812309510334243 0.13785872942891192 178.12472288411655 1824356.490002295 0.03397416648334425 0.22105676950148487 5.507451887438221e-05 4.2590492881148 -0.3557985397192336 SAAGS(ph)EKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPK ddPTM_KYSE-520_SHP099_60min_R1 2 SAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPK 37 2 O00267;O00267-2;M0R2M5 O00267 SUPT5H Transcription elongation factor SPT5 1 S(0.029)AAGS(0.971)EKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPK;S(0.04)AAGS(0.96)EKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPK 206.07 1.1108e-16 2039000000.0 275220.0 236598.0 160697.0 193126.0 236675.0 289870.0 293150.0 298480.0 291320.0 211160.0 True False 259952.99796253187 225231.47693916186 171055.78574429074 211480.63697455078 255299.97600345756 288060.813808183 322784.4628682924 297444.642545756 238423.63157957717 209289.2866799939 1.2420750344474318 1.0761729876959434 0.817317448292694 1.0104704370171966 1.2198425445150214 1.3763762989389505 1.5422885136105133 1.4212129405388667 1.1392060977499057 1.0 17.675138937730253 -5.92048962327502 3.5378406199828416 1.3353254964465442 1.0241933680972346 0.32298188850967846 0.1722727478117285 0.24449783909578202 6.094933447764223 0.057402697218673575 0.06530704254380267 1.2009097663598982e-06 5.92048962327502 -0.3111321283493096 SAAS(ph)PVVSSMPER ddPTM_KYSE-520_SHP099_60min_R1 4 SAASPVVSSMPER 13 0 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 SAAS(1)PVVSSMPER;S(0.002)AAS(0.998)PVVSSMPER;SAAS(1)PVVSSMPER;SAAS(1)PVVSSMPER 239.31 7.8366e-16 2408320000.0 2228640.0 2359520.0 2061170.0 1578400.0 1966610.0 2431510.0 1897950.0 2195530.0 2560150.0 2397570.0 True False 2105012.8965163026 2246165.1174882767 2194036.3161886022 1728410.6614367343 2121371.0185197396 2416334.04416716 2089813.3082069808 2187914.2188705555 2095291.29612953 2376329.3950812365 0.8858253829933965 0.945224648627254 0.9232879586180424 0.72734472965506 0.8927091601487424 1.0168346396626364 0.8794291366056762 0.9207116754938598 0.8817343674940742 1.0 21.180303398607876 -6.010910048165275 24.98701198423195 0.9336563398124939 0.8708509266073429 0.18839526631263626 0.06798787515828891 1054.6097852956125 2415349.807661305 0.02267629855243301 0.024096885490721066 9.751916001957036e-07 6.010910048165275 -0.06280541320515098 SAAS(ph)REDLVGPEVGASPQSGR ddPTM_KYSE-520_SHP099_60min_R1 5 SAASREDLVGPEVGASPQSGR 21 1 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 S(0.195)AAS(0.805)REDLVGPEVGASPQSGR;S(0.207)AAS(0.793)REDLVGPEVGASPQSGR;S(0.004)AAS(0.996)REDLVGPEVGASPQSGR;SAAS(1)REDLVGPEVGASPQSGR;SAAS(1)REDLVGPEVGASPQSGR 235.21 3.6059e-26 2653920000.0 2463150.0 2525000.0 2093440.0 1782540.0 2016360.0 2394750.0 2045460.0 2461100.0 2965840.0 2477320.0 True False 2326514.159332209 2403695.2098977333 2228386.4920224315 1951952.065659808 2175036.0604809625 2379803.4769625906 2252235.0585658457 2452563.018525059 2427318.218742186 2455372.8721257923 0.9475196968018869 0.9789532323930427 0.9075552301321784 0.7949717486166828 0.885827193569129 0.9692228434951405 0.9172680386486165 0.9988556305917395 0.9885741779987505 1.0 21.22751069770078 -7.077676188604552 1.3694961670602475 1.0002080952566912 0.9063400992328411 0.3650048893829144 0.0487170811701448 0.5568026963930196 1.9494615082491178 0.04113818558824215 0.018110461465815405 8.362262789162659e-08 7.077676188604552 -0.0938679960238501 SAASQTADGSGCRVS(ph)YER ddPTM_KYSE-520_SHP099_60min_R1 1 SAASQTADGSGCRVSYER 18 1 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 SAASQTADGS(0.008)GCRVS(0.988)Y(0.004)ER 47.281000000000006 0.064001 33120000.0 23748.0 28251.0 24982.0 27473.0 26910.0 29461.0 24214.0 29690.0 31020.0 28862.0 True False 22430.651099535666 26893.779554384477 26592.379692613267 30084.02565994137 29027.663903044442 29277.122970996934 26661.787425866765 29587.012319698093 25387.549950564626 28606.30513429622 0.784115634446039 0.9401346810826474 0.9295985471654482 1.0516571615490986 1.0147295768107798 1.0234499993463493 0.9320248560832778 1.0342829030452485 0.8874809183282948 1.0 14.804045546953025 -4.028275274463897 1.3482330968033938 0.9907373812301359 0.5972410274439913 0.6027562733845543 0.04915941155114362 1.4661274335483516 1.5860006319315716 0.013799211507724094 0.9124049682722108 9.36967928222164e-05 4.028275274463897 -0.39349635378614456 SAAVETAS(ph)LSPSLVPAR ddPTM_KYSE-520_SHP099_60min_R1 1 SAAVETASLSPSLVPAR 17 0 Q2KHT3;Q2KHT3-3 Q2KHT3 CLEC16A Protein CLEC16A 1 SAAVET(0.027)AS(0.614)LS(0.349)PS(0.009)LVPAR 107.51 0.00015851 0.0 450340.0 441990.0 329390.0 333130.0 316530.0 414450.0 347760.0 447530.0 448390.0 441210.0 True False 425358.74246946693 420756.1369594845 350623.00644263404 364790.5750408135 341439.11019065935 411863.26381757826 382914.9746105325 445977.6228842872 366973.6789920587 437301.2226561855 0.9726904944052536 0.9621654712140856 0.8017883058111193 0.8341860396023149 0.7807870010441412 0.9418296644951138 0.8756320695485169 1.0198407865759005 0.8391782596971614 1.0 18.73826785651143 -6.81569567062278 2.047402373743128 0.9441632277499735 0.8720759395369948 0.13219893870479038 0.07662761388442375 0.6942838742011448 5.937758572436115 0.04097189719643816 0.02516608586545319 1.5286368665645182e-07 6.81569567062278 -0.07208728821297872 SADAGSFS(ph)PTPGQIGGAVK ddPTM_KYSE-520_SHP099_60min_R1 1 SADAGSFSPTPGQIGGAVK 19 0 O00443 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 SADAGSFS(0.977)PT(0.023)PGQIGGAVK 326.09 5.921099999999999e-54 384530000.0 439700.0 473860.0 358350.0 302340.0 341920.0 501640.0 321600.0 443700.0 558480.0 517930.0 True False 415308.9644797805 451095.0543216396 381449.81438027235 331074.3026981647 368827.1587413214 498509.0786860896 354110.4665135352 442160.90826035815 457074.11013511743 513341.5431434431 0.8090304983630181 0.878742545478323 0.7430721699328429 0.6449396257135818 0.71848297428416 0.9711060508243167 0.6898145518189359 0.8613386431824495 0.8903898705260196 1.0 18.96955949255752 -7.940326816999903 1.137542433535994 1.0001874999782787 0.7784392489697342 0.3727552995181804 0.09005039772914643 0.5512664467936064 1.6023850066253378 0.08881849348068457 0.02860648457323728 1.1472899334097448e-08 7.940326816999903 -0.22174825100854456 SADS(ph)DRDVFNEKPSK ddPTM_KYSE-520_SHP099_60min_R1 1 SADSDRDVFNEKPSK 15 2 F5H7P7;Q96BP3-2;Q96BP3 F5H7P7 PPWD1 Peptidylprolyl isomerase domain and WD repeat-containing protein 1 1 SADS(1)DRDVFNEKPSK 159.75 4.3289e-08 399840000.0 182840.0 140080.0 148540.0 146600.0 137180.0 162270.0 145270.0 174100.0 157500.0 142920.0 True False 172697.50071749632 133350.34653563343 158115.12607240333 160532.81992310297 147975.28555256897 161257.21273899975 159955.30929857361 173496.0877352455 128901.97025189955 141653.83999007734 1.2191515650376548 0.9413817976623469 1.116207835124548 1.133275454688331 1.0446260091709088 1.1383892787537253 1.1291985399744777 1.2247891603037282 0.9099786512030239 1.0 17.112010185644895 -7.777696478994705 24.999918372413305 0.9549892481158625 1.1114712722107554 0.400279258696816 0.07963879457752202 280.47228510862124 431293.46395059547 0.07344049196153074 0.019190023412059786 1.6684128304561413e-08 7.777696478994705 0.15648202409489287 SADTLWDIQK ddPTM_KYSE-520_SHP099_60min_R1 7 SADTLWDIQK 10 0 A0A5F9ZHM4;P07195 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain 0 ;;;;;; 278.02 1.2622e-19 2246785000.0 5787840.0 7749080.0 5135610.0 4429680.0 6988160.0 7995410.0 5525430.0 6051620.0 6358440.0 6127220.0 False True 5466776.9774270095 7376802.565193793 5466659.637866526 4850675.455368145 7538088.434808581 7945507.680443251 6083994.387400146 6030628.3426787285 5203907.579228495 6072937.5977050215 0.9001865883642405 1.2147008670040518 0.9001672666507211 0.7987362585779291 1.2412589975660615 1.308346669566616 1.0018206657844306 0.9930331483988438 0.8569012105764211 1.0 22.533963114217077 -7.325175159798618 3.0340903286177747 0.9324126194809196 1.0610414895124853 0.0862804944373069 0.1587222588230908 0.7025355442842426 12.629510878698262 0.10823971195565027 0.046621815327393824 4.7296046591222734e-08 7.325175159798618 0.12862887003156576 SADTLWGIQK ddPTM_KYSE-520_SHP099_60min_R1 4 SADTLWGIQK 10 0 P00338;P00338-3;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 ;;; 306.99 1.714e-36 1560120000.0 3299610.0 3933430.0 2558540.0 2188170.0 3970880.0 3809050.0 2851460.0 3188780.0 3273500.0 3444420.0 False True 3116574.05569054 3744462.1186012016 2723467.58220874 2396133.0189027023 4283365.66478339 3785276.306054645 3139713.404367807 3177718.86644685 2679114.9182196395 3413905.118518213 0.9129058797753794 1.0968266511831077 0.7977572567660716 0.701874520737334 1.2546821062919764 1.1087819299728001 0.9196838504201261 0.930816398267718 0.7847654885565464 1.0 21.702991531923736 -10.811453197091344 2.4077411746972164 1.0171783004205832 0.9510207378861759 0.00933987293673133 0.15950093662506962 271735032.36854106 167862174.14410144 27180088.082856484 0.04171810195854769 1.5436427691606592e-11 10.811453197091344 -0.0661575625344073 SAEALGPGALVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 SAEALGPGALVSPR 14 0 Q9P227;Q9P227-2 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 SAEALGPGALVS(1)PR;SAEALGPGALVS(1)PR 179.79 6.4283e-09 1116500000.0 1162410.0 1327960.0 1031560.0 837600.0 971020.0 1180040.0 893930.0 1194710.0 1474640.0 1209810.0 True False 1097928.800093114 1264162.808291401 1098056.0081543573 917205.252166378 1047433.7496519584 1172674.9326463866 984297.1683160602 1190565.8298574113 1206882.5486492775 1199092.0246179379 0.9156334772912386 1.0542667137613533 0.9157395642792526 0.7649164812505725 0.8735224054097918 0.9779690870848978 0.8208687474422016 0.9928894575349684 1.0064970193041038 1.0 20.193510952317617 -7.4393129977321 11.681087215169267 1.0020697095540776 0.9059759301207199 0.26053109465515645 0.07455199907504642 1.21079566145847 165.99889160704706 0.043789344876538516 0.021012633876551234 3.636528556256127e-08 7.4393129977321 -0.09609377943335773 SAEGS(ph)NPPKPLKK ddPTM_KYSE-520_SHP099_60min_R1 1 SAEGSNPPKPLKK 13 2 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 SAEGS(1)NPPKPLKK 101.39 0.00093915 790870000.0 416650.0 325810.0 393010.0 318850.0 388330.0 345990.0 392930.0 385000.0 514710.0 310280.0 True False 393537.59392881714 310157.5985492197 418344.05343823344 349153.40813425207 418889.361704543 343830.54807152564 432651.1990272503 383664.52485967596 421251.6387832076 307531.1605941869 1.279667377993357 1.0085403961990655 1.3603306170013563 1.1353431875314552 1.3621037975312769 1.1180348274535952 1.4068532053510172 1.2475630896016856 1.369785221014024 1.0 18.23037307336701 -4.772263453742455 24.999074803580548 1.2596406945267318 1.144103839420844 0.08133890862700466 0.13937601091925741 407.50189521063083 941164.4544255945 0.033237779530688606 0.07029787472130263 1.6894157794604722e-05 4.772263453742455 -0.11553685510588774 SAENTILPEEETVVQNT(ph)SAGKDPLKVENSQVTVAVR ddPTM_KYSE-520_SHP099_60min_R1 1 SAENTILPEEETVVQNTSAGKDPLKVENSQVTVAVR 36 2 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 SAENTILPEEET(0.001)VVQNT(0.499)S(0.499)AGKDPLKVENSQVTVAVR 91.53200000000001 0.0010582 226540000.0 155580.0 188650.0 149560.0 143840.0 140540.0 191380.0 123190.0 191200.0 283270.0 148530.0 True False 146949.66725895912 179586.97083057684 159200.8769044609 157510.51035292723 151599.69843678412 190185.52643119328 135643.24741853995 190536.77182641567 231835.30865559098 147214.1397545915 0.9982034844202243 1.2199030006896852 1.0814238168279995 1.06994145138164 1.0297903359657123 1.2918971421375407 0.9214009445333142 1.2942830909044725 1.5748168555144526 1.0 17.167556721742944 -7.456463254331722 10.280311054588937 1.336241271642782 1.0979038926006217 0.22982042380264645 0.1640984603960742 0.7058979976294697 107.21870588256604 0.08322035095089683 0.039842062054012126 3.4957208565132475e-08 7.456463254331722 -0.23833737904216035 SAENTILPEEETVVQNTS(ph)AGKDPLKVENSQVTVAVR ddPTM_KYSE-520_SHP099_60min_R1 1 SAENTILPEEETVVQNTSAGKDPLKVENSQVTVAVR 36 2 Q15058 Q15058 KIF14 Kinesin-like protein KIF14 1 SAENTILPEEETVVQNT(0.162)S(0.838)AGKDPLKVENSQVTVAVR 204.91 1.9973000000000002e-16 309400000.0 193340.0 204280.0 162030.0 171660.0 140320.0 228090.0 142630.0 206100.0 321370.0 196420.0 True False 182615.04478626506 194466.0821694688 172474.71305716646 187974.5147885391 151362.38568841285 226666.4057043103 157048.43233465662 205385.0872041016 263017.3090784319 194679.87161244746 0.9380273536947874 0.9989018410521441 0.885940141775493 0.965557010242657 0.7774937616033183 1.1643032421735873 0.806700924106297 1.054988815756799 1.351024668857523 1.0 17.570744202737128 -7.524675053974753 24.96413252644343 1.1846772160135248 0.9380235139070293 0.367117009727829 0.12773880787652558 56.70335401703981 787955.9862938302 0.07749857177579038 0.029743178557014915 2.9876171654400285e-08 7.524675053974753 -0.2466537021064955 SAEPPRS(ph)PLLK ddPTM_KYSE-520_SHP099_60min_R1 6 SAEPPRSPLLK 11 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;Q9Y2H9;O15021;O15021-2;O15021-3;O15021-6;H7C1I9 Q6P0Q8;O15021 MAST2;MAST1;MAST4 Microtubule-associated serine/threonine-protein kinase 2;Microtubule-associated serine/threonine-protein kinase 1;Microtubule-associated serine/threonine-protein kinase 4 1 SAEPPRS(1)PLLK;SAEPPRS(1)PLLK;S(0.011)AEPPRS(0.989)PLLK;SAEPPRS(1)PLLK;S(0.001)AEPPRS(0.999)PLLK;SAEPPRS(1)PLLK 126.19 0.00012331 3298740000.0 4739970.0 4328370.0 3855970.0 3978630.0 4033000.0 4399340.0 3947200.0 4243810.0 4984440.0 4223200.0 True False 4477034.415204067 4120428.60818418 4104531.995970142 4356757.798981274 4350374.15536894 4371882.087207683 4346221.496959658 4229089.213622704 4079391.343507165 4185785.7335998868 1.0695804085876366 0.9843859362195547 0.9805881756016536 1.0408458713041544 1.039320794766889 1.044459120808305 1.0383287090096207 1.0103453647125828 0.9745819789009554 1.0 21.99706703261762 -7.552716451365094 5.370206117291069 0.9880127792753769 1.0261715096876862 0.2764388695662322 0.026282855106764744 0.26817896201147423 21.11811769741348 0.0191424374912082 0.007169811055354345 2.8008093568439458e-08 7.552716451365094 0.03815873041230933 SAEPPRS(ph)PLLKR ddPTM_KYSE-520_SHP099_60min_R1 1 SAEPPRSPLLKR 12 2 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;Q9Y2H9;O15021;O15021-2;O15021-3;O15021-6;H7C1I9 Q6P0Q8;O15021 MAST2;MAST1;MAST4 Microtubule-associated serine/threonine-protein kinase 2;Microtubule-associated serine/threonine-protein kinase 1;Microtubule-associated serine/threonine-protein kinase 4 1 SAEPPRS(1)PLLKR 58.577 0.034305 2385100000.0 1692800.0 1660200.0 1665700.0 1421100.0 1184800.0 1277400.0 1247100.0 1279000.0 1851400.0 1343000.0 True False 1598897.009486863 1580441.4999889943 1773073.6872142314 1556160.9167307043 1278037.0194101448 1269427.2727725285 1373169.0385231057 1274563.4475208442 1515232.4299959806 1331102.0648381885 1.2011828782500071 1.1873180440007176 1.332034360137342 1.1690770811927742 0.9601345029582729 0.9536663688722041 1.031603116542405 0.9575249570931909 1.1383292611601314 1.0 20.344189766261792 -5.627338244476542 4.672037649230679 1.0040478459009032 1.2372033656598216 0.7472780985553229 0.0622673202349765 0.10194611018473813 3.764065279769286 0.018515920156375817 0.024165121061709927 2.358640521859268e-06 5.627338244476542 0.23315551975891835 SAEPRPELGPGQETGTNS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 SAEPRPELGPGQETGTNSR 19 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 SAEPRPELGPGQET(0.06)GT(0.029)NS(0.911)R;SAEPRPELGPGQET(0.058)GT(0.046)NS(0.896)R;SAEPRPELGPGQET(0.058)GT(0.059)NS(0.882)R;SAEPRPELGPGQET(0.005)GT(0.035)NS(0.96)R 106.69 0.00013148 2598860000.0 1664770.0 1610450.0 1508950.0 1441560.0 1616000.0 1384920.0 1294330.0 1426150.0 1587370.0 1443630.0 True False 1572421.8894632803 1533081.564665268 1606219.3314053654 1578565.428979182 1743170.006217754 1376276.2005700113 1425173.5078434825 1421203.018515913 1299143.6223413208 1430840.561327143 1.098949758598412 1.0714552033968716 1.1225704490202275 1.1032434162440992 1.2182838908347111 0.9618655200083776 0.9960393536241353 0.9932644187817188 0.9079583410302055 1.0 20.4484314907264 -6.28582102633794 24.957703750369888 0.9729178984760393 1.1189320703366574 0.7518214991921774 0.043367533477557355 397.9857338717258 407387.45482908655 0.01538850480555832 0.013577887206197937 5.178201827640346e-07 6.28582102633794 0.14601417186061816 SAEPS(ph)PTVMSTSLGSNLSELDR ddPTM_KYSE-520_SHP099_60min_R1 3 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 S(0.076)AEPS(0.923)PT(0.001)VMSTSLGSNLSELDR;S(0.099)AEPS(0.868)PT(0.033)VMSTSLGSNLSELDR;S(0.307)AEPS(0.693)PTVMSTSLGSNLSELDR 409.25 4.6731999999999996e-108 968680000.0 416530.0 475093.0 282001.0 327878.0 325516.0 454332.0 301136.0 478732.0 467738.0 468987.0 True False 393424.250568031 452268.8191508681 300179.2356775536 359039.42653988465 351132.25726731366 451496.34546210145 331577.7656841422 477071.39042888896 382808.56991544756 464832.140046365 0.8463791908381995 0.9729723489123542 0.6457798629148406 0.7724066294212617 0.755395823602666 0.9713105152691608 0.7133279674918106 1.0263304735797811 0.8235415259307673 1.0 18.826350299380714 -7.266147340474578 24.98386919707279 0.9437019930784444 0.8134839310417284 0.25305830489043424 0.10912415500463492 614.4366628699768 3260618.2538281265 0.056645460022125636 0.02860435899711956 5.418170402108253e-08 7.266147340474578 -0.13021806203671593 SAEPSANTTLVS(ph)ETEEEGSVPAFGAAAK ddPTM_KYSE-520_SHP099_60min_R1 3 SAEPSANTTLVSETEEEGSVPAFGAAAK 28 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 SAEPS(0.004)ANT(0.189)T(0.138)LVS(0.331)ET(0.331)EEEGS(0.007)VPAFGAAAK;SAEPS(0.001)ANT(0.061)T(0.061)LVS(0.438)ET(0.438)EEEGS(0.001)VPAFGAAAK;SAEPSANT(0.034)T(0.151)LVS(0.714)ET(0.101)EEEGSVPAFGAAAK 140.78 1.3685e-06 634469000.0 769020.0 873900.0 674240.0 693770.0 711160.0 952660.0 821200.0 955940.0 898140.0 992770.0 True False 726360.927596636 831916.5322493571 717702.589222143 759705.6922104441 767124.2460531064 946714.0955687163 904214.9101396619 952624.0672580723 735060.4162669288 983974.8301633733 0.738190556638563 0.8454652565769702 0.7293912071947817 0.7720783793669876 0.7796177529518085 0.9621324311837627 0.9189410972936487 0.9681386536075363 0.7470317265583752 1.0 19.908261886685363 -6.247709368393302 23.14270524436795 0.9172382120189548 0.7745090947161012 0.5226063213317436 0.06989309935535938 240.9545630545822 406141.97502280714 0.022174848501182187 0.0220327812523946 5.653151594257115e-07 6.247709368393302 -0.14272911730285365 SAEPSPTVMS(ph)TSLGSNLSELDR ddPTM_KYSE-520_SHP099_60min_R1 4 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 SAEPS(0.001)PT(0.01)VMS(0.325)T(0.325)S(0.325)LGS(0.004)NLS(0.01)ELDR;SAEPSPTVMS(0.413)T(0.413)S(0.173)LGSNLSELDR;SAEPSPTVMS(0.393)T(0.393)S(0.213)LGSNLSELDR;SAEPSPTVMS(0.352)T(0.352)S(0.291)LGS(0.005)NLSELDR 93.37100000000001 0.002326 2720390000.0 4124210.0 4497690.0 4493850.0 4183680.0 4882150.0 5294720.0 4645980.0 5085830.0 5749310.0 5787910.0 True False 3895431.8498911927 4281614.221229677 4783530.76141423 4581295.689330746 5266347.429366342 5261673.688503337 5115640.998795262 5068188.44277164 4705380.2323107915 5736633.6203258345 0.6790449081651369 0.7463635477885873 0.8338567665303559 0.7986035003348416 0.9180205287482206 0.9172058103659197 0.8917496457625785 0.8834777986891504 0.8202337021557132 1.0 22.451772950131247 -4.301236517262415 0.6628737212164033 0.9018193122409875 0.5384047363625825 0.7133260728686708 0.04736222847130536 1.688295727785609 0.5847545010193447 0.021481174199292807 0.4627681307805699 4.9976228974711225e-05 4.301236517262415 -0.3634145758784051 SAEPSPTVMST(ph)SLGSNLSELDR ddPTM_KYSE-520_SHP099_60min_R1 2 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 SAEPSPTVMS(0.2)T(0.4)S(0.4)LGSNLSELDR;SAEPSPTVMS(0.032)T(0.593)S(0.375)LGSNLSELDR 205.21 8.4452e-14 1316740000.0 3962560.0 3567060.0 3975830.0 3704940.0 4529490.0 4085300.0 3885770.0 4271440.0 5237770.0 4894700.0 True False 3742748.8976324783 3395693.0833337842 4232118.36335292 4057056.3836691757 4885935.093727259 4059802.12733491 4278581.553060641 4256623.371601586 4286723.001436779 4851336.766018971 0.7714881646329812 0.6999499822644358 0.8723612825637367 0.8362759749202929 1.0071317101609254 0.8368419516393215 0.8819386819381051 0.8774124693665806 0.8836168685429117 1.0 22.209950900125083 -4.844172959797728 5.175557831440583 0.8955213372653839 0.7362541330347238 0.5602280461943316 0.0581321431179608 0.13524462860082714 6.112293666204483 0.014686354440846728 0.032323505880398014 1.4316176373424827e-05 4.844172959797728 -0.1592672042306601 SAEPSPTVMSTS(ph)LGSNLSELDR ddPTM_KYSE-520_SHP099_60min_R1 3 SAEPSPTVMSTSLGSNLSELDR 22 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 SAEPSPTVMS(0.069)T(0.145)S(0.786)LGSNLSELDR;SAEPSPTVMS(0.01)T(0.224)S(0.766)LGSNLSELDR;SAEPSPTVMS(0.073)T(0.277)S(0.65)LGSNLSELDR 303.34 2.4398999999999998e-45 2394010000.0 5493930.0 6205100.0 5435490.0 5090450.0 5997530.0 6180500.0 5955900.0 5882370.0 7108900.0 6424500.0 True False 5189170.751022061 5906997.681955014 5785870.382491502 5574244.837500397 6469501.489722269 6141925.206959931 6557980.495982479 5861965.431425486 5818102.960785589 6367583.928185374 0.8149355877435391 0.927667031730571 0.908644542065793 0.8754097158934407 1.0160056879793558 0.9645613275348299 1.0299009121739782 0.9205949222715658 0.913706521406405 1.0 22.60231463944655 -5.747754450987531 24.998757596938173 0.9724682649985052 0.8868772794280221 0.5098847998102283 0.04427533902507172 216.5956400804269 395661.371649071 0.013353942242118541 0.017147276653898473 1.7874979360539198e-06 5.747754450987531 -0.08559098557048317 SAES(ph)PTS(ph)PVTSETGSTFK ddPTM_KYSE-520_SHP099_60min_R1 2 SAESPTSPVTSETGSTFK 18 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 2 SAES(1)PT(0.001)S(0.999)PVTSETGSTFK;SAES(1)PTS(0.996)PVT(0.003)S(0.001)ETGSTFK 275.74 3.3195e-26 479600000.0 697750.0 686990.0 689820.0 636840.0 651500.0 742170.0 754510.0 868800.0 935990.0 882740.0 True False 659044.4165698591 653985.9692069878 734286.9009510251 697365.0821270715 702769.3434720724 737537.8417360167 830783.2341079845 865786.3355794437 766037.810387782 874919.6103613273 0.7532628241098456 0.7474812102301632 0.8392621359210096 0.7970618944511613 0.8032387606237793 0.8429778381941008 0.9495537924505827 0.9895610126076478 0.8755522236739226 1.0 19.73879093931202 -6.614708437835486 2.394466491777493 0.9553550245800552 0.7889368299298898 0.7980255117446071 0.03933441563524219 0.1327896671541348 1.547029506633925 0.017554287547111167 0.012853429107076961 2.4282397387133486e-07 6.614708437835486 -0.16641819465016539 SAES(ph)PTS(ph)PVTSETGSTFKK ddPTM_KYSE-520_SHP099_60min_R1 1 SAESPTSPVTSETGSTFKK 19 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 2 SAES(0.999)PT(0.04)S(0.96)PVTSETGSTFKK 171.58 4.6878e-09 1072400000.0 806440.0 787740.0 734610.0 667720.0 696240.0 911490.0 732090.0 887840.0 1335100.0 1034900.0 True False 761705.1656017159 749895.7879781544 781964.1360175575 731179.908042661 751030.126936293 905801.0528099515 806096.8017098708 884760.2902634132 1092679.4951321355 1025731.5911400163 0.7425969641386819 0.7310838375804599 0.7623477162758229 0.7128374658228228 0.7321897204136851 0.8830780494956074 0.7858749878357169 0.8625651173325712 1.0652684430999264 1.0 19.96822183166154 -7.3721142820465335 0.9805937381705347 1.0355783526828284 0.7435299821496038 0.8061789402621549 0.0512134070006173 0.22896638690789348 0.39616537284113007 0.04665452922896674 0.018129136907854677 4.2450784249778e-08 7.3721142820465335 -0.29204837053322463 SAES(ph)PTSPVTSETGSTFK ddPTM_KYSE-520_SHP099_60min_R1 5 SAESPTSPVTSETGSTFK 18 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SAES(0.996)PT(0.004)SPVTSETGSTFK;SAES(0.908)PT(0.084)S(0.007)PVTS(0.001)ETGSTFK;SAES(0.98)PT(0.02)SPVTSETGSTFK;SAES(0.997)PT(0.001)S(0.001)PVTSETGSTFK;SAES(0.491)PT(0.342)S(0.033)PVT(0.012)S(0.123)ETGSTFK 419.8 5.602299999999999e-102 6100250000.0 3984560.0 4543050.0 3085610.0 2860590.0 3093580.0 4299850.0 3037440.0 4010520.0 4022630.0 4272720.0 True False 3763528.5137765664 4324795.058742929 3284513.357750559 3132459.6135322577 3337027.1459375727 4273013.041201625 3344494.077757689 3996608.4421824063 3292221.7942501525 4234867.024925855 0.8887005168344003 1.0212351493654392 0.7755883097198466 0.7396831104955655 0.787988649064134 1.0090076066264295 0.789751852436558 0.9437388278448672 0.7774085407812288 1.0 22.013885238883553 -7.287652850677964 24.88668642271942 0.8954302312491319 0.8603602985200477 0.039655006037672136 0.10389902379830497 4135.3224482752175 3925990.132456305 0.058202130403718466 0.027977129779469076 5.156406525319584e-08 7.287652850677964 -0.03506993272908421 SAES(ph)PTSPVTSETGSTFKK ddPTM_KYSE-520_SHP099_60min_R1 1 SAESPTSPVTSETGSTFKK 19 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SAES(0.999)PT(0.001)SPVTSETGSTFKK 228.29 2.0371e-19 3884100000.0 2312100.0 2363700.0 2221700.0 1529700.0 1784800.0 1883300.0 1244200.0 1492200.0 2888600.0 1766200.0 True False 2183843.2039429196 2250144.3040139647 2364914.3368456825 1675082.2280789248 1925253.6058771359 1871545.6261253336 1369975.8782218322 1487023.9064820986 2364103.0556802386 1750552.8420828062 1.2475162996762696 1.285390677688281 1.3509528418644647 0.9568875544973059 1.0997974808840794 1.06911689903549 0.782596129227288 0.8494595939833721 1.3504893990331825 1.0 20.739379180853625 -5.262511529774298 24.984582319035006 1.005250464745226 1.2936970227485698 0.43232084669654547 0.1462532630952219 88.62211637841519 2065197.7189004442 0.04139725818545446 0.06554974103458257 5.463720444477775e-06 5.262511529774298 0.28844655800334373 SAESPT(ph)S(ph)PVTSETGSTFKK ddPTM_KYSE-520_SHP099_60min_R1 1 SAESPTSPVTSETGSTFKK 19 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 2 S(0.011)AES(0.26)PT(0.829)S(0.828)PVT(0.056)S(0.014)ET(0.001)GSTFKK 62.203 0.023275 939190000.0 681380.0 703610.0 577950.0 617980.0 588240.0 618380.0 549900.0 735780.0 1121900.0 652160.0 True False 643582.4931026452 669807.5194598576 615205.5817526961 676712.6333975386 634531.1413722357 614520.4610435861 605489.2585068194 733227.7509123427 918191.2407974997 646382.3697728021 0.9956683894841669 1.0362403908004008 0.9517672673667378 1.0469230985297406 0.9816652975780698 0.9507073363705524 0.9367354167157184 1.1343560486806996 1.4205078661415782 1.0 19.30202832322544 -7.470886617716997 5.474459971639363 1.2317215857828958 0.989046742671672 0.45945003141712426 0.100497901151158 0.14658544525222528 9.98192657119739 0.05478375123172583 0.024537079829742965 3.3815310711084035e-08 7.470886617716997 -0.24267484311122378 SAESPT(ph)SPVTSETGSTFKK ddPTM_KYSE-520_SHP099_60min_R1 1 SAESPTSPVTSETGSTFKK 19 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SAES(0.028)PT(0.475)S(0.401)PVT(0.092)S(0.003)ET(0.001)GSTFKK 75.97 0.015869 3737700000.0 956970.0 1060600.0 846210.0 714510.0 782880.0 1236100.0 963640.0 1325500.0 1872500.0 1469200.0 True False 903884.9664276014 1009647.1840069428 900758.0505838714 782416.8155747342 844488.2020221255 1228385.0413919867 1061054.135420099 1320902.1498740243 1532501.2018836944 1456184.0310203042 0.6207216582331813 0.6933513639066029 0.6185743226099915 0.537306273731431 0.5799323327494658 0.8435644226446395 0.7286538739726807 0.9070983623879655 1.052409015095377 1.0 20.473761262678646 -7.081179309020751 0.9960538925472466 1.0330466962190565 0.6160708533613152 0.8369813933526502 0.06976113505250132 0.22240907781979247 0.4018470952715485 0.06179438336449042 0.027624433770128045 8.295082141983471e-08 7.081179309020751 -0.41697584285774136 SAESPTS(ph)PVTSETGSTFK ddPTM_KYSE-520_SHP099_60min_R1 6 SAESPTSPVTSETGSTFK 18 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SAESPT(0.006)S(0.986)PVT(0.001)S(0.007)ETGSTFK;SAESPT(0.229)S(0.77)PVTS(0.001)ETGSTFK;SAESPTS(0.952)PVTS(0.047)ETGSTFK;SAESPT(0.016)S(0.982)PVTS(0.001)ETGSTFK;SAESPTS(0.837)PVT(0.001)S(0.161)ETGSTFK;SAESPT(0.017)S(0.786)PVT(0.017)S(0.181)ETGSTFK 438.43 2.0644999999999994e-118 7353150000.0 7995780.0 9293860.0 6398700.0 6744780.0 6610700.0 12239900.0 10672710.0 15838700.0 15958300.0 15723700.0 True False 7552238.144207742 8847369.01523174 6811170.440281993 7385801.8633079445 7130924.480262195 12163506.24393962 11751611.68241193 15783759.246480351 13060674.996005664 15584400.250853498 0.4846024243887175 0.5677067370460537 0.4370505332670066 0.47392275252321325 0.4575681043530476 0.7804924185820671 0.7540624915462075 1.0127922148056956 0.8380608034813776 1.0 23.893599299651658 -6.5730263723878615 1.493023644980919 0.9347893538141873 0.4808649030357702 0.8775669702629854 0.07467585640287301 0.12558227112427184 0.5695061790508829 0.03756056050104606 0.026409738763060416 2.6728440961670743e-07 6.5730263723878615 -0.4539244507784171 SAESPTS(ph)PVTSETGSTFKK ddPTM_KYSE-520_SHP099_60min_R1 2 SAESPTSPVTSETGSTFKK 19 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SAES(0.007)PT(0.186)S(0.764)PVT(0.034)S(0.009)ETGSTFKK;SAESPT(0.072)S(0.441)PVT(0.441)S(0.046)ET(0.001)GSTFKK 163.64 7.5225e-09 3944200000.0 1467950.0 1546740.0 1345210.0 1185510.0 1187570.0 1805790.0 1619740.0 2000250.0 2823500.0 2072480.0 True False 1386519.887214223 1472432.288695926 1431924.389012101 1298180.5139634232 1281025.0026510032 1794519.394786212 1783479.1263390374 1993311.5996118607 2310823.5746427863 2054119.4395650418 0.674994774163579 0.7168192171959156 0.6970988937796675 0.6319888166962248 0.6236370573087314 0.8736197906613453 0.8682450942174462 0.9703971255118168 1.1249704034406594 1.0 20.9700886408821 -6.816967067388747 1.226704410592856 1.0485361780273914 0.6712787112182359 0.8818972632480545 0.056873499826938796 0.15405585063904212 0.45968111666761 0.0398717355186511 0.02171103245280823 1.5241683273125123e-07 6.816967067388747 -0.3772574668091555 SAESPTSPVTS(ph)ETGSTFK ddPTM_KYSE-520_SHP099_60min_R1 1 SAESPTSPVTSETGSTFK 18 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SAESPTS(0.37)PVT(0.001)S(0.629)ETGSTFK 259.29 9.5066e-30 1516200000.0 864710.0 1025600.0 787680.0 786650.0 753040.0 1519700.0 1126100.0 1988900.0 1994800.0 1799900.0 True False 816742.8125433499 976328.6365430146 838455.1131325604 861412.9794850531 812299.9637885008 1510214.988595908 1239937.1776769047 1982000.9701127491 1632594.6048158058 1783954.2863010112 0.4578272093714058 0.5472834388415916 0.46999809332058506 0.4828671822477993 0.4553367594820977 0.846554757704753 0.6950498604131199 1.1110155598338696 0.9151549551199284 1.0 20.76664721610043 -6.647613522994027 1.1992872347260182 1.0041328037737904 0.47803527307621674 0.8359453257063101 0.09657980473059752 0.1701403128694268 0.49685647381726344 0.05689798640427416 0.03610162691978798 2.2510569217612936e-07 6.647613522994027 -0.5260975306975737 down SAFS(ph)PYQTPVAHFPPPPEEPTATAAFGAR ddPTM_KYSE-520_SHP099_60min_R1 1 SAFSPYQTPVAHFPPPPEEPTATAAFGAR 29 0 A0A0A0MQV9;Q9UPS6-2;Q9UPS6 A0A0A0MQV9 SETD1B Histone-lysine N-methyltransferase;Histone-lysine N-methyltransferase SETD1B 1 S(0.105)AFS(0.851)PY(0.008)QT(0.036)PVAHFPPPPEEPTATAAFGAR 51.878 0.05436900000000001 159080000.0 69785.0 77933.0 61196.0 46888.0 35945.0 60175.0 45002.0 58780.0 70967.0 72774.0 True False 65913.8869370514 74188.98170018215 65140.792077061975 51344.22142260878 38773.66700092651 59799.42550421711 49551.24133719565 58576.1058993551 58081.18173248605 72129.2789773153 0.9138298326506404 1.0285557093051578 0.9031116489816678 0.7118360553521763 0.5375579452710298 0.8290589667896731 0.686978187495532 0.8120988692785535 0.8052372428504743 1.0 16.13829738188627 -5.1047599726414665 4.259356395403229 0.7513313022348238 0.9705604618771235 0.3387696987410057 0.11530187484465396 0.22354716806373856 6.847778205138455 0.03113407993669945 0.05735383283983024 7.856697412750118e-06 5.1047599726414665 0.21922915964229972 SAFS(ph)SLQNIPESLRR ddPTM_KYSE-520_SHP099_60min_R1 1 SAFSSLQNIPESLRR 15 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 SAFS(0.5)S(0.5)LQNIPESLRR 130.09 3.0755e-05 552040000.0 325850.0 345180.0 361840.0 312350.0 350770.0 348690.0 344450.0 347220.0 462900.0 369900.0 True False 307774.450934129 328597.03467425675 385164.7853644696 342035.650088548 378373.60339170916 346513.69637001184 379270.3675080452 346015.574861757 378849.0287593926 366622.97377784504 0.8394849012397808 0.8962805338908465 1.050574603646797 0.932935671117556 1.0320509909479498 0.9451499800991239 1.034497002737924 0.9437913049917731 1.0333477601132437 1.0 18.483937667070983 -4.58456671700958 5.335572340697704 0.9927762420300172 0.8519281509931935 0.6223294729064961 0.04102120474239978 0.10006683249015222 5.525785020528745 0.009444830266541299 0.026864592283393378 2.602754961300648e-05 4.58456671700958 -0.14084809103682372 SAFSNLFGGEPLS(ph)YTR ddPTM_KYSE-520_SHP099_60min_R1 1 SAFSNLFGGEPLSYTR 16 0 P02786;F8WBE5 P02786 TFRC Transferrin receptor protein 1;Transferrin receptor protein 1, serum form 1 SAFSNLFGGEPLS(0.363)Y(0.274)T(0.363)R 93.478 0.002739 48534000.0 52961.0 57524.0 58033.0 60444.0 57068.0 66366.0 52932.0 55086.0 72086.0 57611.0 True False 50023.14775486396 54760.460694715664 61773.900036083 66188.57958684863 61558.92692749679 65951.78517678233 58282.88312653753 54894.91952316906 58996.999540180506 57100.611360679795 0.8760527525509216 0.959017064612804 1.0818430584899357 1.1591571089977317 1.0780782457591522 1.1550101409631766 1.0207050631803192 0.9613718349952799 1.033211346329062 1.0 15.801218571762773 -4.565850186541336 3.2768743824004822 1.0656093119454777 0.8855981600536401 0.5002547476773522 0.05985686637828462 0.21037588776551425 4.430016461692301 0.01734460640500397 0.06603111287871767 2.7173764885807658e-05 4.565850186541336 -0.18001115189183758 SAFSS(ph)LQNIPESLR ddPTM_KYSE-520_SHP099_60min_R1 6 SAFSSLQNIPESLR 14 0 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.002)AFS(0.132)S(0.865)LQNIPESLR;SAFS(0.057)S(0.943)LQNIPESLR;SAFS(0.031)S(0.969)LQNIPESLR;SAFS(0.002)S(0.998)LQNIPESLR;SAFS(0.008)S(0.992)LQNIPESLR;SAFS(0.006)S(0.994)LQNIPESLR 220.59 5.5171e-14 3613250000.0 3263680.0 3085380.0 2752350.0 2645700.0 2624290.0 3302170.0 3099710.0 3926140.0 3882050.0 3802310.0 True False 3082637.16441522 2937153.7135502025 2929770.8849157062 2897146.532541292 2830806.692832423 3281559.9321522326 3413058.937054328 3912521.136707965 3177167.5785167464 3768624.4915524144 0.8179740834686836 0.7793702238400242 0.7774111990947769 0.7687543662244435 0.7511511691275787 0.8707580018938038 0.9056511055173826 1.0381828026321283 0.8430576157530547 1.0 21.84560662031898 -6.6039675271737215 2.201216835084015 0.9549927484087162 0.778647743338615 0.7083404674117023 0.050911637294644575 0.1604450570311374 1.579369726341328 0.021638655433306418 0.015798724288292227 2.489043420699747e-07 6.6039675271737215 -0.1763450050701012 SAFSS(ph)LQNIPESLRR ddPTM_KYSE-520_SHP099_60min_R1 2 SAFSSLQNIPESLRR 15 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 SAFS(0.201)S(0.799)LQNIPESLRR;SAFS(0.201)S(0.799)LQNIPESLRR 153.06 2.3388999999999997e-06 927760000.0 153275.0 139286.0 133435.0 130229.0 142284.0 130774.0 116164.0 134960.0 190334.0 151533.0 True False 144772.53020386284 132594.49148745157 142036.4336035485 142605.9250052234 153480.9413147815 129957.79095784761 127906.99077138798 134491.85525990065 155774.14352968312 150190.5355108901 0.9639257874099902 0.8828418584194829 0.9457082839500872 0.9495000768199754 1.021908210079275 0.8652861547885257 0.8516314981919325 0.895474903278102 1.037176830083199 1.0 17.196434376491926 -7.764115122999709 24.998709130522627 1.0185884527620592 0.9215235440207719 0.38172675885449825 0.049148787977916664 79.82798511339661 745739.284512338 0.043721560559769564 0.013285294243789032 1.721412201688568e-08 7.764115122999709 -0.09706490874128737 SAGAGS(ph)PARPPSPR ddPTM_KYSE-520_SHP099_60min_R1 1 SAGAGSPARPPSPR 14 1 P83369 P83369 LSM11 U7 snRNA-associated Sm-like protein LSm11 1 SAGAGS(0.703)PARPPS(0.297)PR 142.55 0.00056694 0.0 385230.0 306420.0 297000.0 271560.0 276980.0 365860.0 310500.0 338030.0 404150.0 337370.0 True False 363860.523963034 291699.12325420283 316145.0952168015 297368.9807525091 298776.7501993775 363576.5320311238 341888.3701879749 336857.45282679505 330766.54779241397 334381.1642698883 1.0881609457802834 0.8723551276912368 0.945463228788904 0.8893113982715077 0.8935214722747555 1.0873116397718836 1.0224510430618254 1.0074055862635494 0.9891901313120709 1.0 18.351134056963943 -6.250606535791962 24.990999590715862 1.0218082410890565 0.931864792975004 0.3153329929430334 0.06121592743874788 837.0331888673201 1931008.5665967565 0.019902442896816586 0.01970942996432263 5.615565073081025e-07 6.250606535791962 -0.08994344811405253 SAGAGSPARPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SAGAGSPARPPSPR 14 1 P83369 P83369 LSM11 U7 snRNA-associated Sm-like protein LSm11 1 SAGAGS(0.008)PARPPS(0.992)PR 81.185 0.012647 268720000.0 781350.0 667190.0 701680.0 471950.0 720250.0 696280.0 560280.0 658910.0 838780.0 670510.0 True False 738006.9579173903 635137.1909273935 746911.4155276954 516803.98610305885 776929.5773380813 691934.2582480474 616918.5702058568 656624.3950007502 686478.6959231002 664569.8030488864 1.110503297820021 0.9557117822891393 1.1239021275132357 0.7776519241953013 1.169071441064152 1.0411761940937123 0.9282976255851272 0.9880442836678938 1.0329670303611467 1.0 19.342061215282936 SAGGRPGS(ph)GPQLGTGR ddPTM_KYSE-520_SHP099_60min_R1 9 SAGGRPGSGPQLGTGR 16 1 K7EM11;K7ESN1;O14908-2;O14908 K7EM11 GIPC1 PDZ domain-containing protein GIPC1 1 SAGGRPGS(1)GPQLGTGR;SAGGRPGS(1)GPQLGTGR;SAGGRPGS(1)GPQLGTGR;SAGGRPGS(1)GPQLGTGR;SAGGRPGS(0.97)GPQLGT(0.03)GR;SAGGRPGS(1)GPQLGTGR;SAGGRPGS(0.998)GPQLGT(0.002)GR;SAGGRPGS(1)GPQLGTGR;SAGGRPGS(1)GPQLGTGR 212.55 5.454199999999999e-18 22429300000.0 8479700.0 7955110.0 7798780.0 7118260.0 7564770.0 7214980.0 6939890.0 7217550.0 8409130.0 7508620.0 True False 8009314.1371371355 7572934.574736442 8301501.837289193 7794777.290217086 8160074.36134646 7169948.633559061 7641441.807999435 7192514.003638832 6882243.968916555 7442099.4684179565 1.0762170233179855 1.0175804027981232 1.1154784846021317 1.0473895603378842 1.0964747778466781 0.9634309060213692 1.026785766627741 0.9664630302459285 0.9247718332874667 1.0 22.82727824245842 -6.2666691802404175 24.998355413795636 0.9773502097003104 1.0688816227229743 0.647258801419889 0.03480493427557257 288.80599432330075 1380482.980402622 0.011959225286088346 0.01087823666863337 5.41166394419216e-07 6.2666691802404175 0.09153141302266388 SAGGRPGSGPQLGT(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 1 SAGGRPGSGPQLGTGR 16 1 K7EM11;K7ESN1;O14908-2;O14908 K7EM11 GIPC1 PDZ domain-containing protein GIPC1 1 SAGGRPGS(0.268)GPQLGT(0.732)GR 113.4 0.00065658 1748100000.0 1094100.0 1106000.0 971300.0 1001000.0 1006500.0 913190.0 823700.0 909080.0 1038200.0 963280.0 True False 1033408.0919657237 1052866.0998601553 1033911.5521349489 1096134.7390383766 1085705.8237983738 907490.4424793692 906967.6345373117 905926.6136608663 849689.0508922053 954746.0886204989 1.0823904955283792 1.1027707915320488 1.0829178191542375 1.1480903164758376 1.1371670821580395 0.9505044883614985 0.9499568998997192 0.9488665357821248 0.8899633745762822 1.0 19.864757578900345 -6.26839601964584 24.46529862343025 0.944793569064106 1.1107660260398666 0.8703457145450533 0.031408121071849114 138.40203353269672 486734.3455308993 0.011059567651988681 0.009964901685608657 5.390188837741234e-07 6.26839601964584 0.16597245697576057 SAGGSSPEGGEDS(ph)DREDGNYCPPVKR ddPTM_KYSE-520_SHP099_60min_R1 6 SAGGSSPEGGEDSDREDGNYCPPVKR 26 2 Q9H6Z4-3;Q9H6Z4;B7Z7F3;Q9H6Z4-2;K7EID7;K7ENB9 Q9H6Z4-3 RANBP3 Ran-binding protein 3 1 SAGGSSPEGGEDS(1)DREDGNYCPPVKR;SAGGSSPEGGEDS(1)DREDGNYCPPVKR;SAGGSSPEGGEDS(1)DREDGNYCPPVKR;SAGGSSPEGGEDS(1)DREDGNYCPPVKR;SAGGSSPEGGEDS(1)DREDGNYCPPVKR;SAGGSSPEGGEDS(1)DREDGNYCPPVKR 346.75 1.2267999999999997e-73 7751250000.0 3756580.0 3798910.0 3503440.0 3145850.0 3163130.0 3370390.0 3038550.0 3267040.0 4345470.0 3373830.0 True False 3548195.0188434245 3616404.6613198332 3729277.348102192 3444830.6381657133 3412050.3352522072 3349354.1458273083 3345716.2873902465 3255707.400772865 3556442.1883842717 3343940.4910000185 1.0610819864746823 1.0814799698299455 1.1152343644090799 1.030171035470647 1.0203681388575847 1.0016189447275932 1.000531049040797 0.9736140369529223 1.0635482891983834 1.0 21.67311774266908 -5.449660714064322 4.176598344446968 1.008687219705867 1.0852060473855147 0.6520569514870138 0.024764377816013528 0.13494468974192952 4.458576100908928 0.007125515879912887 0.010597571327921395 3.5509069008308968e-06 5.449660714064322 0.0765188276796478 SAGNIPLS(ph)PLAR ddPTM_KYSE-520_SHP099_60min_R1 2 SAGNIPLSPLAR 12 0 O15021;O15021-2;O15021-3;O15021-6;H7C1I9 O15021 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 SAGNIPLS(1)PLAR;SAGNIPLS(1)PLAR 134.88 4.5051000000000006e-05 690620000.0 1040330.0 1027010.0 820200.0 731480.0 809060.0 1157490.0 827600.0 1157890.0 1220490.0 1148600.0 True False 982620.8210535612 977670.8980265616 873071.4043664009 800999.6392725182 872728.4190783036 1150265.6755608856 911261.8845976441 1153873.5498435567 998879.7820491488 1138424.2975972788 0.8631411180589246 0.8587930704659079 0.7669121312757263 0.7036037802101395 0.7666108505591946 1.0104015506244892 0.8004589207388877 1.0135707330552277 0.8774231050385624 1.0 20.11860692833302 -6.247272136852855 24.960303316884097 0.9324745375638229 0.7892495393232567 0.49333710695395794 0.07504040591509988 716.6955553966827 1262697.828887419 0.024957911280483108 0.024843899921596663 5.658845843036893e-07 6.247272136852855 -0.14322499824056623 SAGS(ph)FKR ddPTM_KYSE-520_SHP099_60min_R1 3 SAGSFKR 7 1 H0Y465;P21359-2;P21359-6;P21359 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 SAGS(1)FKR;SAGS(1)FKR;S(0.022)AGS(0.978)FKR 71.425 0.027937 4892320000.0 2532170.0 2487950.0 2205460.0 2203260.0 2345930.0 2154660.0 2229540.0 2073480.0 2515290.0 2132210.0 True False 2391705.4823442516 2368425.1475109165 2347627.4804607667 2412657.167965728 2530541.3444841695 2141211.967709454 2454923.6614135206 2066287.58183387 2058576.7413009545 2113320.278234276 1.1317288283168192 1.1207128289564259 1.110871600788433 1.1416429363851817 1.1974244370562188 1.0131980418502784 1.161642977970505 0.9777446434008087 0.9740959581483499 1.0 21.01107999670358 -7.26988170107254 24.997091754126625 0.9819402090307232 1.123673646439964 0.6765387840121475 0.044778836741388335 369.2771248988208 1093395.172076305 0.02342565728658138 0.0115329058560763 5.371781001838383e-08 7.26988170107254 0.14173343740924071 SAIDLT(ph)PIVVEDKEEK ddPTM_KYSE-520_SHP099_60min_R1 4 SAIDLTPIVVEDKEEK 16 1 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8YD40;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9;A0A2R8Y7X1 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 SAIDLT(1)PIVVEDKEEK;SAIDLT(1)PIVVEDKEEK;SAIDLT(1)PIVVEDKEEK;SAIDLT(1)PIVVEDKEEK 213.13 2.2016999999999996e-17 2980080000.0 2183260.0 2297900.0 1856370.0 1703320.0 1884730.0 2205550.0 1865190.0 2356380.0 2841460.0 2575610.0 True False 2062150.21557909 2187505.4347817823 1976034.5804970157 1865203.0206781665 2033047.5283532096 2191784.344342766 2053741.6077001896 2348206.267763225 2325522.4913775395 2552792.0991942612 0.8078018637827841 0.8569070060473101 0.7740679631219136 0.730652144084464 0.7964015279563507 0.858583174491397 0.8045079771080508 0.9198580129202022 0.9109721438387188 1.0 21.28364461796829 -7.58855473210369 0.8662442258373848 0.9954114522765399 0.7947118018972653 0.7615690688998603 0.037119881806453654 0.28380284912631487 0.4249324790400252 0.03708673102369411 0.014304732406768182 2.578963929176496e-08 7.58855473210369 -0.20069965037927462 SALAPNLLTS(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 1 SALAPNLLTSGK 12 0 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 SALAPNLLT(0.175)S(0.825)GK 116.19 0.0012956 66055000.0 503890.0 488900.0 462850.0 406020.0 406280.0 385650.0 392700.0 457960.0 546890.0 465830.0 True False 475938.2172201888 465412.5101461394 492686.05158618407 444608.01872563566 438251.9245830136 383243.01530039613 432397.94838266633 456371.4436486671 447588.561974993 461703.10861025617 1.0308317365520472 1.0080341705886466 1.067105770782414 0.9629738471199005 0.9492072208527433 0.8300637534236495 0.9365281288319685 0.9884521787656193 0.9694293879074184 1.0 18.816605920407593 -5.427930842450452 4.5577845036941165 0.9399401929466974 1.0321382142676125 0.4329822725748381 0.045691982102049965 0.22168420423544064 7.7573242409626175 0.014059560465999675 0.02102480537097214 3.733095993099863e-06 5.427930842450452 0.09219802132091515 SALAPNLLTS(ph)GKK ddPTM_KYSE-520_SHP099_60min_R1 1 SALAPNLLTSGKK 13 1 O15446;O15446-2 O15446 CD3EAP DNA-directed RNA polymerase I subunit RPA34 1 SALAPNLLT(0.054)S(0.946)GKK 136.35 9.3914e-06 1674500000.0 1273200.0 1166700.0 999070.0 1069200.0 993580.0 1094400.0 1044500.0 1200000.0 1380500.0 1176700.0 True False 1202573.0579387255 1110649.9807475961 1063471.6507685187 1170816.4465332977 1071769.0933031177 1087569.4436529311 1150088.25333765 1195837.4800821044 1129835.999572999 1166275.3534587475 1.0311227570507533 0.9523051116992339 0.9118529750411423 1.0038936714739646 0.9189674549193219 0.9325151564144751 0.9861206874747954 1.0253474675047247 0.9687557884356532 1.0 20.15347701324076 -6.954245884981163 7.949892149445602 0.9993714269606159 0.9564561758936552 0.1970203034813507 0.03663884527890887 0.3593792560569508 54.45842344590315 0.01536088134043923 0.010300387460954645 1.1111024750643198e-07 6.954245884981163 -0.0429152510669607 SALDQYR ddPTM_KYSE-520_SHP099_60min_R1 2 SALDQYR 7 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 147.34 0.010846 796250000.0 1213070.0 1495120.0 963980.0 836340.0 1393680.0 1490990.0 1096660.0 1190930.0 1151740.0 1238750.0 False True 1145778.5889049084 1423292.1909791285 1026119.6932225337 915825.5021452092 1503354.6870455213 1481684.1783553413 1207521.0951701915 1186798.9417951524 942613.0490026842 1227775.6387329174 0.9332149561848033 1.1592445281354393 0.8357550523493888 0.745922523019234 1.2244539145580422 1.2068036957342314 0.9835030579498801 0.9666252565655615 0.7677404724982773 1.0 20.227615518908202 -7.53423868296296 23.897764927543754 0.8783076500828598 1.0138929126008844 0.0975596607078254 0.1551403975711419 326.56511723389855 686963.9461359411 0.11024046287189065 0.04175928279033703 2.922545740810725e-08 7.53423868296296 0.1355852625180246 SALPVS(ph)PSISSAPVPVEIENLPQS(ph)PGTDQHDR ddPTM_KYSE-520_SHP099_60min_R1 1 SALPVSPSISSAPVPVEIENLPQSPGTDQHDR 32 0 Q9HCM4-2;Q9HCM4-4;Q9HCM4-3;Q9HCM4 Q9HCM4-2 EPB41L5 Band 4.1-like protein 5 2 S(0.003)ALPVS(0.73)PS(0.25)IS(0.008)S(0.009)APVPVEIENLPQS(0.946)PGT(0.054)DQHDR 85.991 0.00193 55765000.0 44661.0 71480.0 56972.0 55435.0 60047.0 67592.0 74321.0 89038.0 111910.0 85958.0 True False 42183.56530050373 68045.99350633266 60644.50627842297 60703.52573285952 64772.35727930545 67170.13325602068 81834.09198306125 88729.14795962542 91589.9650215244 85196.47899431213 0.49513273081766657 0.7986949027655889 0.7118193966968013 0.7125121419268066 0.7602703544078361 0.7884144280247202 0.9605337327206286 1.0414649643625429 1.0750440171082554 1.0 16.37850618743705 -6.7102546395766325 1.2845572491688473 1.0562097018874792 0.6918037524158338 0.8091386151946682 0.0754151427558525 0.1857590745340596 0.6205693042359053 0.04526494132337226 0.02737963532638946 1.9487016838472228e-07 6.7102546395766325 -0.3644059494716454 SALPVSPSISSAPVPVEIENLPQS(ph)PGTDQHDR ddPTM_KYSE-520_SHP099_60min_R1 1 SALPVSPSISSAPVPVEIENLPQSPGTDQHDR 32 0 Q9HCM4-2;Q9HCM4-4;Q9HCM4-3;Q9HCM4 Q9HCM4-2 EPB41L5 Band 4.1-like protein 5 1 SALPVSPSISSAPVPVEIENLPQS(0.996)PGT(0.004)DQHDR 233.28 4.282899999999999e-31 751150000.0 233530.0 223650.0 167580.0 182640.0 197080.0 282330.0 259760.0 365370.0 350330.0 293920.0 True False 220575.62536948666 212905.51829450586 178382.4749374805 199998.05068728162 212589.07476818992 280567.87374500406 286019.075813296 364102.6167479994 286718.9031006226 291316.0974662998 0.7571693678719674 0.7308402115304848 0.6123330515853703 0.6865327814931955 0.7297539566716967 0.9631046007591836 0.9818169277321981 1.249854092907172 0.9842192230169876 1.0 18.152225898170975 -6.40623796246231 1.8506783052364513 1.0808777034595993 0.6902985438108166 0.815146912547428 0.08011562057302 0.1354804201348114 0.9200758039629545 0.034592304398483195 0.028535385704717905 3.924298528544365e-07 6.40623796246231 -0.39057915964878276 SALPVSPSISSAPVPVEIENLPQS(ph)PGTDQHDRK ddPTM_KYSE-520_SHP099_60min_R1 2 SALPVSPSISSAPVPVEIENLPQSPGTDQHDRK 33 1 Q9HCM4-2;Q9HCM4-4;Q9HCM4-3;Q9HCM4 Q9HCM4-2 EPB41L5 Band 4.1-like protein 5 1 SALPVSPSISSAPVPVEIENLPQS(0.805)PGT(0.195)DQHDRK;SALPVSPSISSAPVPVEIENLPQS(0.844)PGT(0.156)DQHDRK 210.79 1.7462000000000002e-22 4544700000.0 1227480.0 1256330.0 1045700.0 1097610.0 1010870.0 1784130.0 1560640.0 2162800.0 3430300.0 1908980.0 True False 1159389.237479286 1195974.0210102233 1113107.4951791563 1201926.5243915187 1090419.7179364744 1772994.5828805808 1718404.7215786218 2155297.7516013123 2807443.99082598 1892067.9223639676 0.6127630111876397 0.6320988833825596 0.5883020805027069 0.6352449138769924 0.5763110853727141 0.9370670904168095 0.9082151339639174 1.1391228222443848 1.4837966214861529 1.0 20.85153244949132 -6.791232525050177 1.2197915479198587 1.2407936822624206 0.6059544314969719 0.7961014672902778 0.12867361567238458 0.19441605102958834 0.5762876913753899 0.08367017725490841 0.04660746904401256 1.6172139353705443e-07 6.791232525050177 -0.6348392507654487 SALPVSPSISSAPVPVEIENLPQSPGT(ph)DQHDRK ddPTM_KYSE-520_SHP099_60min_R1 1 SALPVSPSISSAPVPVEIENLPQSPGTDQHDRK 33 1 Q9HCM4-2;Q9HCM4-4;Q9HCM4-3;Q9HCM4 Q9HCM4-2 EPB41L5 Band 4.1-like protein 5 1 SALPVSPSISSAPVPVEIENLPQS(0.434)PGT(0.566)DQHDRK 110.03 0.00019923 95199000.0 21915.0 40376.0 28204.0 28305.0 21159.0 38242.0 31065.0 40997.0 75103.0 51761.0 True False 20699.331263530592 38436.276354388414 30022.07496799554 30995.09868979144 22824.092921758354 38003.31749285036 34205.35336518339 40854.79097577176 61466.188392561366 51302.43780944864 0.40347656266186804 0.7492095501806623 0.5851978239222428 0.604164246637085 0.44489295043898913 0.7407702073341063 0.666739336875793 0.7963518444779892 1.1981143785186914 1.0 15.646739761561884 -7.497108924255561 2.223704956256586 1.0986740347788064 0.5990245810894285 0.7375411695424219 0.11731642781829883 0.15629880311121894 1.424126818912164 0.09291749998185703 0.031306780931321054 3.183399001670853e-08 7.497108924255561 -0.49964945368937796 SALQSINEWAAQTTDGKLPEVTK ddPTM_KYSE-520_SHP099_60min_R1 1 SALQSINEWAAQTTDGKLPEVTK 23 1 P50454;E9PR70;E9PPV6;E9PK86;E9PMI5;E9PNX1 P50454 SERPINH1 Serpin H1 0 152.07 3.7967e-07 263180000.0 339880.0 290260.0 194310.0 318310.0 288990.0 317530.0 270480.0 308620.0 239340.0 229620.0 False True 321026.1788660177 276315.47391085775 206835.53350699248 348562.08669660846 311731.86887182493 315548.1774882274 297822.7580304138 307549.4692524497 195881.88927041044 227585.7454416565 1.4105724338887273 1.2141159077192447 0.9088246414800899 1.5315637893761025 1.3697337162609773 1.3865023790302402 1.3086178022813084 1.351356468550411 0.8606948949736678 1.0 17.796050673449276 -7.759237779789434 24.99998075873347 0.9303473403556343 1.305440678911887 0.4795006324105412 0.15822605295321582 49.05690673862603 557113.170101712 0.12399254124058424 0.041667966559936126 1.7408534808670432e-08 7.759237779789434 0.3750933385562528 SALS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 6 SALSPSK 7 0 P49792;Q7Z3J3 P49792 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 1 SALS(1)PSK;SALS(1)PSK;SALS(1)PSK;S(0.002)ALS(0.996)PS(0.002)K;S(0.001)ALS(0.997)PS(0.002)K;SALS(1)PSK 121.8 0.0024508000000000004 3131870000.0 5693940.0 5059260.0 4114810.0 4309010.0 4630820.0 5595890.0 4692850.0 5441340.0 5837660.0 5776310.0 True False 5378085.797612021 4816205.55549592 4380057.236528784 4718537.014848905 4995239.188238433 5560963.97482 5167249.075802385 5422465.261558304 4777688.099433046 5725136.387301181 0.9393812537883033 0.8412385713951995 0.7650572737872424 0.8241789707080174 0.8725100766714099 0.9713242792179887 0.9025547561214025 0.9471329405506868 0.8345107917481839 1.0 22.448878631606124 -6.029171118378411 5.573946834173437 0.9260101630421994 0.837815282815352 0.3491801991818101 0.057203766210133365 0.2179010067976657 20.019085639921244 0.018839420654763767 0.019602890306529272 9.35037183229683e-07 6.029171118378411 -0.0881948802268474 SALS(ph)PSKS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 8 SALSPSKSPAK 11 1 P49792;Q7Z3J3 P49792 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 2 SALS(0.999)PS(0.001)KS(1)PAK;SALS(1)PS(0.07)KS(0.931)PAK;SALS(0.999)PS(0.036)KS(0.965)PAK;S(0.021)ALS(0.973)PS(0.023)KS(0.983)PAK;SALS(1)PS(0.001)KS(1)PAK;SALS(0.96)PS(0.043)KS(0.997)PAK;SALS(0.997)PS(0.003)KS(1)PAK;SALS(0.724)PS(0.551)KS(0.724)PAK 186.08 3.3032999999999998e-06 16823320000.0 23071280.0 20235460.0 18656990.0 19058930.0 20586670.0 19306440.0 20143080.0 20310760.0 23018090.0 18955080.0 True False 21791470.10694357 19263318.127555322 19859649.427639473 20870284.976923738 22206723.806870606 19185941.346599687 22179339.103916258 20240306.714127026 18838585.09482886 18787152.738029085 1.1599133945844347 1.0253452663192746 1.0570867073135266 1.1108806782987377 1.1820164618090105 1.0212266655906497 1.1805588325803456 1.0773482813687068 1.0027376344631331 1.0 24.163243101806085 -7.702992629591957 4.206607606181465 0.9993622956930869 1.1019325866671137 0.3526577046093048 0.05526029588178007 0.23281649234635649 7.961109616083296 0.043771627214921886 0.014005030830907476 1.9815606545691395e-08 7.702992629591957 0.10257029097402681 SALSPS(ph)KS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 1 SALSPSKSPAK 11 1 P49792;Q7Z3J3 P49792 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 2 SALS(0.338)PS(0.671)KS(0.991)PAK 180.95 1.0218e-05 4460500000.0 4600900.0 4102500.0 3476400.0 3898500.0 3896000.0 3678100.0 3789600.0 3889800.0 4187200.0 3558300.0 True False 4345678.905333235 3905409.7420219574 3700494.306436667 4269012.267873233 4202593.034792314 3655143.6135780793 4172689.750931888 3876307.1916861483 3426910.030722252 3526776.230315513 1.2321958132695199 1.1073596641748293 1.0492569034088146 1.2104573664690141 1.191624520622433 1.0363979381961193 1.1831455920180651 1.0991077796107767 0.9716834318166178 1.0 21.749918610737467 -7.655762423579345 4.1440306522075385 0.9858705512489381 1.1395894883543416 0.5002962194392426 0.06221707278720824 0.18487750199615052 5.526978078296281 0.04840390967365009 0.016070912613178112 2.2092129301975873e-08 7.655762423579345 0.15371893710540352 SALSPSKS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 3 SALSPSKSPAK 11 1 P49792;Q7Z3J3 P49792 RANBP2;RGPD4 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4 1 SALSPS(0.046)KS(0.954)PAK;SALSPS(0.011)KS(0.989)PAK;SALS(0.003)PS(0.04)KS(0.957)PAK 120.7 0.00027967 3551500000.0 1611920.0 1611110.0 1329960.0 1137040.0 1248000.0 1495500.0 1214040.0 1475310.0 1760550.0 1512580.0 True False 1522503.5843171428 1533709.8572745873 1415691.3496112395 1245103.9397364594 1346210.4998513344 1486166.0297724435 1336767.0110885971 1470192.4939499437 1440878.4998538552 1499179.7179694322 1.0155577520614418 1.0230326884037122 0.9443106337702636 0.830523468809259 0.8979647227850125 0.9913194608751676 0.891665618915379 0.9806646103385455 0.9611112547636762 1.0 20.515741909702555 -9.816090383539745 16.912898616465235 0.9999999999694444 0.9461156369950742 0.0665287261876294 0.05731356587903542 0.0 0.0 0.06005881152949964 0.014566401393246518 1.5272481806979628e-10 9.816090383539745 -0.05388436297437027 SALSSS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 3 SALSSSLR 8 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;A0A3B3IU98;A0A0C4DGT3;Q6DN90-2 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SALS(0.002)S(0.023)S(0.975)LR;SALSS(0.002)S(0.998)LR;S(0.001)ALS(0.03)S(0.126)S(0.843)LR 122.94 0.00091009 1523320000.0 3680580.0 3119140.0 3150310.0 3274820.0 3176940.0 3416640.0 3276420.0 3311810.0 3806620.0 3550430.0 True False 3476410.890345675 2969291.8324754117 3353384.023274217 3586057.9081894658 3426947.1036840603 3395315.4824217404 3607632.5083777276 3300322.104092263 3115433.7650811817 3518975.952392743 0.9879041338665228 0.8437942948875308 0.9529431484162513 1.0190629196403318 0.973847832450771 0.9648589613444448 1.0251938510476897 0.937864352795078 0.8853239712998974 1.0 21.746724224508007 -4.987139804837023 24.90154264607521 0.9727779564507932 0.9114790741945152 0.1656566840467414 0.04998379430550536 342.69427059936044 663558.1786529896 0.0128924082982414 0.0268129853736021 1.0300544796174725e-05 4.987139804837023 -0.061298882256278 SALVTSSSS(ph)LPSFPSTLSWSR ddPTM_KYSE-520_SHP099_60min_R1 3 SALVTSSSSLPSFPSTLSWSR 21 0 Q14161-6;Q14161-3;Q14161;F8VXI9;Q14161-4 Q14161-6 GIT2 ARF GTPase-activating protein GIT2 1 SALVTSS(0.001)S(0.032)S(0.967)LPSFPSTLSWSR;SALVTSSS(0.004)S(0.991)LPS(0.005)FPSTLSWSR;SALVTSSS(0.001)S(0.998)LPS(0.002)FPSTLSWSR 353.41 3.7226e-66 1141109000.0 629010.0 854321.0 633222.0 562606.0 619473.0 794496.0 548891.0 628869.0 769437.0 607553.0 True False 594117.5613996525 813278.1367980345 674040.5033110232 616075.9050863389 668222.0007807746 789537.2557606731 604378.2589399291 626687.6002181288 629726.6367283238 602170.5530890808 0.9866267261856011 1.3505777269014414 1.1193514858095535 1.0230920491311386 1.1096889367187681 1.3111522171092855 1.0036662467792934 1.0407144570641618 1.0457612606559432 1.0 19.199812634589954 SAMDSPVPASMFAPEPS(ph)SPGAAR ddPTM_KYSE-520_SHP099_60min_R1 2 SAMDSPVPASMFAPEPSSPGAAR 23 0 O00178;F8WAZ4 O00178 GTPBP1 GTP-binding protein 1 1 SAMDSPVPASMFAPEPS(0.5)S(0.5)PGAAR;SAMDSPVPASMFAPEPS(0.5)S(0.5)PGAAR 199.75 2.1868000000000004e-15 1029630000.0 771100.0 1008250.0 624690.0 524105.0 615980.0 833460.0 639150.0 928750.0 922610.0 943830.0 True False 728325.5458502594 959812.1565858959 664958.51693934 573915.781622086 664454.1215532266 828258.0669837116 703761.5195028808 925528.3830218797 755087.2811054302 935468.400488628 0.7785677693333408 1.0260230661821954 0.7108294802817593 0.6135063261595043 0.7102902900901398 0.8853939551042914 0.7523092379553189 0.989374288365533 0.8071756146022908 1.0 19.83532939543006 -7.252676302814813 24.756883983795603 0.9237062154334378 0.7837232082278233 0.2599459254471118 0.1155212884856247 857.3420916581049 2422116.174485396 0.05865402127846776 0.033178359877387695 5.5888660024934985e-08 7.252676302814813 -0.13998300720561452 SAMDSPVPASMFAPEPSS(ph)PGAAR ddPTM_KYSE-520_SHP099_60min_R1 4 SAMDSPVPASMFAPEPSSPGAAR 23 0 O00178;F8WAZ4 O00178 GTPBP1 GTP-binding protein 1 1 SAMDSPVPASMFAPEPS(0.26)S(0.74)PGAAR;SAMDSPVPASMFAPEPS(0.02)S(0.98)PGAAR;SAMDSPVPASMFAPEPS(0.024)S(0.976)PGAAR;SAMDSPVPAS(0.001)MFAPEPS(0.201)S(0.798)PGAAR 288.69 3.1533e-48 1018730000.0 1450580.0 1732610.0 1386191.0 1273857.0 1341922.0 1498710.0 1311119.0 1563194.0 1715600.0 1524287.0 True False 1370113.4357404613 1649372.8148993696 1475547.089844021 1394923.9862809272 1447523.6269082578 1489355.9949717533 1443659.7038083342 1557771.6448662234 1404090.2867565658 1510783.0030573409 0.9068896280721921 1.091733764254408 0.9766770521365321 0.9233119405355024 0.9581280858858842 0.9858172827982403 0.9555705226275576 1.0311021779526197 0.9293791920581161 1.0 20.52686502738168 SAMPFT(ph)ASPASSTTAR ddPTM_KYSE-520_SHP099_60min_R1 3 SAMPFTASPASSTTAR 16 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 SAMPFT(0.849)AS(0.151)PASSTTAR;SAMPFT(0.917)AS(0.083)PASSTTAR;SAMPFT(0.851)AS(0.149)PASSTTAR 173.03 1.4064e-07 17908200000.0 4642330.0 5394270.0 3487240.0 2820300.0 3083430.0 4175210.0 3320530.0 4161940.0 5034590.0 4581680.0 True False 4384810.700644577 5135121.172235662 3712033.070181281 3088340.4640458836 3326078.3986831773 4149150.9656744916 3656201.5776498467 4147503.2015440944 4120435.3676857837 4541089.8796930965 0.9655855349290992 1.1308124939783646 0.8174321954693734 0.6800879405308324 0.7324405565185523 0.9136905623094398 0.8051374613833775 0.9133277057763054 0.907367058756445 1.0 22.11460716096514 -4.772507731338023 24.999273208072843 0.8340404968616972 1.0481990151215597 0.4046389748295929 0.097126259761697 174.93429971834158 395113.5656029418 0.0261733364224124 0.055314038753934994 1.6884658010434897e-05 4.772507731338023 0.21415851825986243 SAMPFTAS(ph)PASSTTAR ddPTM_KYSE-520_SHP099_60min_R1 5 SAMPFTASPASSTTAR 16 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 SAMPFT(0.151)AS(0.848)PASSTTAR;SAMPFT(0.003)AS(0.996)PAS(0.001)STTAR;SAMPFT(0.002)AS(0.995)PAS(0.003)STTAR;SAMPFT(0.002)AS(0.557)PAS(0.332)S(0.083)T(0.021)T(0.005)AR;SAMPFT(0.184)AS(0.816)PASSTTAR 201.04 1.4240000000000002e-12 26469100000.0 6476590.0 7755110.0 5538070.0 4335680.0 4895570.0 6844680.0 5139370.0 6542100.0 7460020.0 6847370.0 True False 6117320.641937924 7382542.874942568 5895062.853425295 4747741.723630279 5280823.507016985 6801959.813214867 5658907.675017624 6519406.982037617 6105468.419800483 6786707.628973249 0.9013679351416828 1.0877944474026888 0.8686189498216457 0.6995647938864515 0.7781127161677823 1.0022473613238478 0.833822227858923 0.9606140913166062 0.8996215475285134 1.0 22.69428043255697 -10.16375238432338 11.686863326265987 1.0000000051139364 0.8919475657814598 0.08701084502831946 0.10453566576104222 0.0 0.0 0.1083957454895164 0.026289829883579138 6.858791732313072e-11 10.16375238432338 -0.10805243933247655 SANAFLTPSYTWT(ph)PLKTEVDESQATK ddPTM_KYSE-520_SHP099_60min_R1 1 SANAFLTPSYTWTPLKTEVDESQATK 26 1 Q15398-1;Q15398-3;Q15398 Q15398-1 DLGAP5 Disks large-associated protein 5 1 SANAFLTPS(0.006)YT(0.082)WT(0.913)PLKTEVDESQATK 238.37 1.6316999999999999e-28 334240000.0 522840.0 740520.0 508200.0 418600.0 411190.0 509590.0 423350.0 617800.0 729590.0 607370.0 True False 493837.0229442996 704944.3076568194 540959.3851487498 458383.61814332136 443548.3136489345 506409.45978718734 466146.34949783934 615656.995995604 597114.8474671971 601989.174326709 0.8203420327228119 1.171024891677263 0.8986197895564857 0.7614482746404827 0.736804468527226 0.8412268548742223 0.7743434091139559 1.0227044309960918 0.9919029659213331 1.0 19.199378017425772 -9.492827451864235 8.576595089220161 0.9999928759364853 0.8900418668669116 0.05998772056202606 0.12947787381459486 0.0 0.0 0.13470061891376148 0.032669698801030045 3.214937601389528e-10 9.492827451864235 -0.10995100906957378 SANTS(ph)PESSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SANTSPESSSR 11 0 H7C0A2;P20749 H7C0A2 BCL3 B-cell lymphoma 3 protein 1 SANT(0.088)S(0.912)PESSSR 148.48 0.0054093000000000006 0.0 273400.0 260430.0 219080.0 211690.0 213150.0 250390.0 248600.0 242710.0 311770.0 263300.0 True False 258233.95699061197 247918.55188660053 233202.247340394 231808.95395308075 229923.69234239767 248827.22313254522 273730.9141021923 241868.09565893956 255160.42708212548 260967.3668443006 0.9895258557162074 0.9499982886155828 0.8936069293274055 0.8882679729507466 0.8810438451470282 0.953480222992791 1.0489085950179617 0.9268135651736253 0.977748406506168 1.0 17.993509887993053 -6.521146663643791 24.99993364950933 0.9849724368098595 0.9186862932743627 0.37855334843882904 0.040887881105776194 78.79556283025218 1137323.5399045176 0.016264006555093975 0.012791827382132859 3.011988687210152e-07 6.521146663643791 -0.06628614353549678 SAPAS(ph)PT(ph)HPGLMSPR ddPTM_KYSE-520_SHP099_60min_R1 1 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 S(0.121)APAS(0.889)PT(0.982)HPGLMS(0.008)PR 118.16 0.00032921 485120000.0 466890.0 542360.0 405200.0 372050.0 351890.0 460870.0 342690.0 473930.0 530200.0 397240.0 True False 440990.6809778596 516304.21150104294 431319.8403429233 407409.52013908845 379581.74101978104 457993.53937895404 377332.44953210076 472286.0474460938 433929.04525433114 393720.76264804316 1.1200595010836962 1.3113461632770944 1.095496812111204 1.0347676800150922 0.9640887071000079 1.163244570336175 0.9583757965779612 1.1995456990117692 1.1021238563490012 1.0 18.586813268669975 -4.92244046995318 7.695900360986014 1.0646864136979641 1.214758241582747 0.3353670337715029 0.0860961941131705 0.25476196206753715 21.71657240069641 0.02178813000012776 0.0457213905160518 1.1955273889667114e-05 4.92244046995318 0.1500718278847828 SAPAS(ph)PTHPGLMSPR ddPTM_KYSE-520_SHP099_60min_R1 6 SAPASPTHPGLMSPR 15 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 S(0.004)APAS(0.862)PT(0.135)HPGLMSPR;S(0.002)APAS(0.962)PT(0.036)HPGLMSPR;S(0.141)APAS(0.85)PT(0.009)HPGLMSPR;SAPAS(0.999)PT(0.001)HPGLMSPR;S(0.003)APAS(0.975)PT(0.022)HPGLMSPR;S(0.005)APAS(0.993)PT(0.001)HPGLMSPR 176.21 1.1299999999999999e-08 4805800000.0 1864110.0 2608460.0 1960270.0 3099960.0 1498380.0 2377560.0 1769290.0 1867990.0 2296060.0 2005550.0 True False 1760704.1022888431 2483145.6662217155 2086632.1407428973 3394579.266363038 1616293.9813840096 2362720.7661288986 1948147.0998063867 1861510.378682145 1879153.3829623898 1987782.3872942915 0.8857630058215072 1.249203978309566 1.049728659475224 1.707721774808376 0.8131141475622286 1.1886214412760552 0.980060550017321 0.9364759395096441 0.945351661717979 1.0 20.922728395663245 -6.467518821325945 1.403836981775462 0.9593414617476547 1.185003426558034 0.12552712338552008 0.22891839168053787 0.8286487941265197 3.307063192921726 0.11497028338003426 0.08759624344171817 3.407855556166113e-07 6.467518821325945 0.22566196481037937 SAPAS(ph)PVQSPAK ddPTM_KYSE-520_SHP099_60min_R1 6 SAPASPVQSPAK 12 0 P35612 P35612 ADD2 Beta-adducin 1 S(0.004)APAS(0.993)PVQS(0.002)PAK;SAPAS(0.993)PVQS(0.007)PAK;SAPAS(1)PVQSPAK;SAPAS(1)PVQSPAK;SAPAS(1)PVQSPAK;SAPAS(1)PVQSPAK 260.15 1.6243e-21 3033670000.0 5809040.0 6778240.0 5021950.0 4584810.0 4788580.0 7018530.0 5162480.0 6645500.0 7950300.0 6451340.0 True False 5486800.971165851 6452603.176054333 5345672.932404097 5020548.963926614 5165414.002706816 6974724.750878495 5684353.859349497 6622448.311571359 6506725.930753518 6394186.146666564 0.8580921551722803 1.0091359600812095 0.8360208492195553 0.7851740391611748 0.8078297822780254 1.0907916333518972 0.8889878600598577 1.0356983922064567 1.0176003296597211 1.0 22.60832931359332 -6.252531585685216 24.9974299321302 1.0014950574817327 0.862171621589561 0.5040678838429982 0.07296843678888194 624.7020118845078 1753065.9764360506 0.02542241547314923 0.02507163640425835 5.590728654336017e-07 6.252531585685216 -0.13932343589217178 SAPGTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 SAPGTSPR 8 0 Q03111 Q03111 MLLT1 Protein ENL 1 S(0.003)APGT(0.478)S(0.519)PR;S(0.001)APGT(0.17)S(0.829)PR;SAPGT(0.097)S(0.903)PR 85.86200000000001 0.011136 4437600000.0 3428960.0 2558780.0 2595820.0 2789500.0 2683440.0 3284040.0 3607000.0 2412510.0 3144530.0 3035620.0 True False 3238748.7533377106 2435852.367992916 2763150.7106588534 3054613.2413062467 2894611.4613149604 3263543.088207216 3971630.760927621 2404141.565894069 2573562.6191505115 3008726.768476625 1.0764516031402713 0.8095957378097959 0.918378743995384 1.0152511265929458 0.9620718942121012 1.0846924095602106 1.3200370344491374 0.7990561293511312 0.8553660126650698 1.0 21.520721666469992 -3.9266886039053204 19.947100152725643 0.9787906235502112 3.9084158042096218 0.04230831523954315 0.1447541538670706 1408.7403146397787 409969.10584597825 0.03694284349077921 12748.52974553466 0.00011838901196365386 3.9266886039053204 2.9296251806594107 SAPTS(ph)PTATNISSK ddPTM_KYSE-520_SHP099_60min_R1 1 SAPTSPTATNISSK 14 0 Q9H792;H0YN99;H3BUZ5 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 SAPT(0.004)S(0.981)PT(0.015)AT(0.001)NISSK 118.24 0.00011742 478230000.0 533670.0 656900.0 452580.0 354410.0 429510.0 749210.0 506770.0 738850.0 819640.0 838080.0 True False 504066.2612552302 625341.5379729973 481754.03095360333 388093.0198427476 463309.9934223938 744533.9024846609 557999.2571985831 736287.1017988857 670814.0374429661 830655.2632163736 0.606829672400364 0.7528292008306999 0.5799686732715175 0.46721309913816195 0.5577644709411879 0.8963211761299833 0.6717579264326318 0.886393109637221 0.8075721266672199 1.0 19.663890331410222 -6.25766335592003 24.994096931655747 0.8340177564140173 0.5941014555193408 0.6153119801241747 0.10206855913478104 250.67259523888626 1659243.9181043908 0.035313849418786694 0.03403236876592004 5.525055489168309e-07 6.25766335592003 -0.23991630089467653 SAPYQWPS(ph)PEAGIELMR ddPTM_KYSE-520_SHP099_60min_R1 4 SAPYQWPSPEAGIELMR 17 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4;F6QUH3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 SAPYQWPS(1)PEAGIELMR;SAPYQWPS(1)PEAGIELMR;SAPYQWPS(1)PEAGIELMR;SAPYQWPS(1)PEAGIELMR 124.99 7.3153e-05 1706980000.0 1652543.0 1728881.0 1274664.0 1181272.0 1257425.0 1474984.0 1179267.0 1412545.0 1839101.0 1706658.0 True False 1560873.1455272022 1645822.9616567134 1356830.8809745116 1293539.7357176228 1356377.1937304223 1465778.0777384662 1298478.8168968202 1407645.2110854802 1505166.6183634228 1691538.3378798338 0.9227536323436767 0.9729740821124871 0.8021283648085429 0.7647120415484874 0.8018601549584145 0.8665355344979444 0.7676319169474618 0.8321686712994139 0.8898211673109293 1.0 20.689904444796202 -10.365047364295876 7.648004656274188 1.0000021834664186 0.8432284548133777 0.33755099143798317 0.0642454812556763 2.606246795180308e-06 2.1631853939069529e-07 0.06778004052965259 0.016438845480913445 4.314720177846434e-11 10.365047364295876 -0.15677372865304084 SAQGSSS(ph)PVPSMVQK ddPTM_KYSE-520_SHP099_60min_R1 9 SAQGSSSPVPSMVQK 15 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3;A0A0A0MSW3;A0A494BZU9 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 1 SAQGS(0.002)S(0.183)S(0.815)PVPSMVQK;SAQGSS(0.003)S(0.997)PVPSMVQK;SAQGSS(0.02)S(0.98)PVPSMVQK;SAQGSS(0.003)S(0.997)PVPSMVQK;SAQGSS(0.002)S(0.998)PVPSMVQK;SAQGSS(0.012)S(0.987)PVPSMVQK;SAQGS(0.001)S(0.025)S(0.974)PVPSMVQK;SAQGSS(0.023)S(0.977)PVPS(0.001)MVQK;SAQGSS(0.002)S(0.996)PVPS(0.002)MVQK 391.86 6.006999999999999e-82 13811570000.0 24213140.0 29820330.0 18427350.0 16504250.0 16757820.0 27443060.0 19228740.0 26022670.0 27809420.0 28244310.0 True False 22869988.856502067 28387716.585572124 19615206.465802465 18072808.957816288 18076565.095047038 27271777.68305374 21172568.693617802 25932403.431506827 22759930.34642913 27994087.387140673 0.8169578289952611 1.0140611548784502 0.7006910493111085 0.6455937894270556 0.6457279655185568 0.9741977763340579 0.7563228763565125 0.9263528784803001 0.813026337728877 1.0 24.73861881288158 -6.27065974866744 24.984559202983114 0.8807734526884401 0.7683022954079768 0.22300488521088946 0.11938010429988381 1313.244846348472 3558507.5430710204 0.044651255116034565 0.03992894774974644 5.362165959820135e-07 6.27065974866744 -0.11247115728046331 SAS(ph)ADNLTLPR ddPTM_KYSE-520_SHP099_60min_R1 4 SASADNLTLPR 11 0 Q8ND76-3;Q8ND76-2;Q8ND76 Q8ND76-3 CCNY Cyclin-Y 1 S(0.002)AS(0.998)ADNLTLPR;S(0.016)AS(0.984)ADNLTLPR;S(0.001)AS(0.999)ADNLTLPR;S(0.005)AS(0.995)ADNLTLPR 140.33 9.5139e-05 1137590000.0 1347710.0 1603550.0 1361600.0 1396180.0 1367040.0 1756170.0 1393540.0 1784270.0 2140260.0 1487320.0 True False 1272949.8397067208 1526513.0510223794 1449370.9146370292 1528872.5274231778 1474618.2706063862 1745209.0916118133 1534412.6228397784 1778080.7838217486 1751642.735564006 1474143.5019174512 0.8635182653866239 1.0355254078295701 0.9831952674565266 1.0371259822632868 1.0003220640923476 1.1838800560066107 1.0408841614428541 1.206178897447202 1.1882443827792921 1.0 20.491445541130016 -5.155240681890158 0.574125782872726 1.1372368450533894 0.8809882811662855 0.4666275723562747 0.07517035919022996 1.4165597051754337 0.6977039146736586 0.04657978558428127 0.21524139567865516 6.994542576442788e-06 5.155240681890158 -0.25624856388710393 SAS(ph)APTLAETEKETAEHLDLAGASSR ddPTM_KYSE-520_SHP099_60min_R1 2 SASAPTLAETEKETAEHLDLAGASSR 26 1 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.031)AS(0.923)APT(0.046)LAETEKETAEHLDLAGASSR;S(0.082)AS(0.886)APT(0.032)LAETEKETAEHLDLAGASSR 227.97 2.6614999999999996e-22 630890000.0 454410.0 552430.0 446050.0 562550.0 479810.0 476850.0 467690.0 488760.0 505190.0 472910.0 True False 429202.97145612276 525890.4335856644 474803.0967052343 616014.5828631754 517568.3172545425 473873.80227147334 514968.6694145377 487064.60563744133 413460.23080353806 468720.3853184122 0.9156908572784936 1.1219704754859665 1.012977270836407 1.3142474749518371 1.1042155055896423 1.0109946507864391 1.0986692397957218 1.0391368092654376 0.8821042219502898 1.0 18.838368015484246 -7.57620377100148 5.300580776329375 0.9427792900919871 1.0874037914577377 0.23526423440887312 0.10049144257163463 0.2813223069047323 16.862479430361887 0.07128759773156947 0.025980007245200797 2.653360313017291e-08 7.57620377100148 0.14462450136575056 SAS(ph)APTLAETEKETAEHLDLAGASSRPK ddPTM_KYSE-520_SHP099_60min_R1 3 SASAPTLAETEKETAEHLDLAGASSRPK 28 2 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.187)AS(0.812)APTLAETEKETAEHLDLAGASSRPK;SAS(0.872)APT(0.128)LAETEKETAEHLDLAGASSRPK;S(0.11)AS(0.89)APTLAETEKETAEHLDLAGASSRPK 294.59 1.9797e-52 6059960000.0 1548940.0 1755530.0 1600930.0 2043070.0 1825140.0 1441200.0 1315730.0 1378840.0 1928300.0 1553370.0 True False 1463017.2104646633 1671191.7036957485 1704128.5093785678 2237242.7585286074 1968768.1343739326 1432204.9362140035 1448736.8286873568 1374057.1258636748 1578169.3284872265 1539608.3503035738 0.950252842014134 1.0854654713753855 1.106858448151801 1.453124593723772 1.2787460746012054 0.9302397820404177 0.9409775079497982 0.8924718585689301 1.025045965862714 1.0 20.55413197028606 -6.273904882490575 24.216755639558418 0.9499783970285599 1.1815994887677022 0.41794700933537376 0.12783877961881385 540.322650085014 1049681.8498429938 0.04956254810764476 0.04404584071187978 5.322248123370998e-07 6.273904882490575 0.23162109173914225 SAS(ph)ASHQADIK ddPTM_KYSE-520_SHP099_60min_R1 2 SASASHQADIK 11 0 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 SAS(0.5)AS(0.5)HQADIK;S(0.002)AS(0.995)AS(0.002)HQADIK 281.38 1.0962e-23 1068500000.0 893910.0 1167350.0 895330.0 1896110.0 1015890.0 988250.0 1120330.0 1169580.0 1531220.0 844800.0 True False 844323.030334594 1111268.7537719277 953044.4043786493 2076315.7243137425 1095834.763376581 982081.9651772762 1233583.8897671318 1165522.999962025 1253189.0469150082 837315.7292444543 1.008368768011157 1.327180076713324 1.1382139031815657 2.4797285561412905 1.3087473758141381 1.1728932478832694 1.47326014152421 1.3919755227979846 1.4966744361124258 1.0 19.67541220130544 SAS(ph)ASPLTPCSVTR ddPTM_KYSE-520_SHP099_60min_R1 1 SASASPLTPCSVTR 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SAS(0.862)AS(0.138)PLTPCSVTR 189.99 9.542700000000001e-11 511210000.0 1994900.0 1781700.0 1808400.0 1590400.0 1565900.0 1811600.0 1581800.0 1933600.0 2058300.0 1765500.0 True False 1884238.9202654406 1696104.4576137755 1924972.357542302 1741551.1378288036 1689127.4212477612 1800293.1324210986 1741703.7808803178 1926892.7929056347 1684564.6055205415 1749859.0435382137 1.0767946865340141 0.9692806194173523 1.1000728113791436 0.9952522428934553 0.9652934203387873 1.0288218008582608 0.9953394745205271 1.1011702914135637 0.9626858870382801 1.0 20.73880728259395 -3.6560675069920774 5.387236278359337 1.0170796168640444 5.337211495736463 0.13073091361883582 0.048240866355892885 3129.4888764502393 843.0673716233732 0.011505101293263827 162544.35080606112 0.00022076615461257392 3.6560675069920774 4.320131878872419 SAS(ph)DTNLQK ddPTM_KYSE-520_SHP099_60min_R1 1 SASDTNLQK 9 0 A0A0C4DGH6;A0JNW5 A0A0C4DGH6 UHRF1BP1L UHRF1-binding protein 1-like 1 SAS(0.868)DT(0.132)NLQK 113.38 0.00088754 717480000.0 550040.0 442050.0 327460.0 286650.0 299290.0 407420.0 337430.0 378440.0 399380.0 395580.0 True False 519528.1847224439 420813.25446942233 348568.5955545253 313893.1298155349 322842.4202728418 404877.14065522444 371540.71739944787 377127.2799685604 326862.6595504992 392075.46895658266 1.325071895227332 1.073296566064994 0.8890344414613831 0.8005936475722091 0.8234190757509302 1.032651039690676 0.9476255129866114 0.9618742049131423 0.8336728141150168 1.0 18.580771853802627 -4.401181083209965 2.449397560975241 0.9086443977465467 1.3587975954554925 0.7503927855784298 0.07367243536617381 0.20215370892356915 1.8364636708540814 0.020751671931730775 0.16664378965915713 3.970259712017405e-05 4.401181083209965 0.4501531977089458 SAS(ph)FAFEFPK ddPTM_KYSE-520_SHP099_60min_R1 6 SASFAFEFPK 10 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 S(0.025)AS(0.975)FAFEFPK;SAS(1)FAFEFPK;S(0.179)AS(0.821)FAFEFPK;S(0.006)AS(0.994)FAFEFPK;SAS(1)FAFEFPK;S(0.001)AS(0.999)FAFEFPK 172.92 3.701e-05 727839000.0 1723839.0 1357978.0 1272845.0 1191085.0 1295575.0 1382579.0 1174172.0 1404838.0 1552452.0 1347691.0 True False 1628214.2142821483 1292738.698513467 1354894.625324006 1304285.3602872354 1397529.3816866153 1373949.8116193614 1292868.7645744141 1399964.9448696526 1270565.850930172 1335751.5062277336 1.218949936938759 0.9677987952746256 1.0143313475650377 0.9764431140120058 1.0462495270795893 1.0285968649210082 0.9678961682218696 1.0480728925571365 0.9511992649878038 1.0 20.34922021330579 -4.255800550204197 24.99910234556415 1.00260480614373 1.2189500295206002 0.8034351082022108 0.03245798416731706 249.392407968738 1105620.2519746325 0.007580033341593067 0.06494187705423766 5.548804833840094e-05 4.255800550204197 0.21634522337687012 SAS(ph)FREEYIR ddPTM_KYSE-520_SHP099_60min_R1 3 SASFREEYIR 10 1 P05120;H7C004;H7BYS2;E7EPJ9 P05120 SERPINB2;SERPINB10 Plasminogen activator inhibitor 2 1 SAS(1)FREEYIR;SAS(1)FREEYIR;S(0.008)AS(0.991)FREEYIR 180.62 1.9704e-05 3565190000.0 3819540.0 3587990.0 3197820.0 3118470.0 3323820.0 3208470.0 2851720.0 3256040.0 4388500.0 3308240.0 True False 3607662.502135778 3415617.5747172143 3403956.5938929026 3414848.451197804 3585385.7240511775 3188444.7486084835 3139999.6877051597 3244745.557205452 3591659.025082295 3278931.567371774 1.1002555033582169 1.0416861421279984 1.0381298066007953 1.041451576842445 1.0934615896619768 0.9724035659469953 0.95762891758733 0.9895740397553574 1.0953748046535743 1.0 21.64479436174023 -6.265606914066516 24.969558880795354 0.9995091839517014 1.0592345212179433 0.36094933440559496 0.039625294350171765 426.3357943495248 2554353.905411028 0.014170816492981483 0.012925769162041833 5.424916849719072e-07 6.265606914066516 0.05972533726624185 SAS(ph)ITNLSLDR ddPTM_KYSE-520_SHP099_60min_R1 1 SASITNLSLDR 11 0 Q9Y2I7;E9PDH4;Q9Y2I7-2;Q9Y2I7-3;Q9Y2I7-4 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 S(0.022)AS(0.871)IT(0.107)NLSLDR 87.23299999999999 0.0033806999999999995 756320000.0 92839.0 101600.0 124930.0 112200.0 111850.0 95330.0 84165.0 95031.0 142180.0 106160.0 True False 87689.03560004181 96718.9834952909 132983.1876950676 122863.45426583987 120651.95866055455 94735.0101091319 92673.21957124298 94701.35964140216 116363.6960661277 105219.50499123013 0.8333914477867059 0.9192115426065943 1.2638644109393171 1.167687058365085 1.146669133927314 0.9003559759858963 0.8807608397223228 0.9000361639155721 1.1059137379122475 1.0 16.683042642429818 -6.268640397833686 24.8196920830014 0.9463748218664012 1.0746241000159702 0.14480474996264692 0.1299645671610888 991.4925397481979 3417358.7564819166 0.04943514562869524 0.044538078562144055 5.387156623202717e-07 6.268640397833686 0.128249278149569 SAS(ph)LETKK ddPTM_KYSE-520_SHP099_60min_R1 1 SASLETKK 8 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.008)AS(0.992)LETKK 72.2 0.013303 528650000.0 919660.0 994940.0 759100.0 674680.0 954260.0 1019700.0 801790.0 783470.0 900780.0 891160.0 True False 868644.6265032421 947141.5889646139 808032.8006029429 738801.3843500622 1029354.8330033144 1013335.6740614902 882842.7579163169 780752.325433272 737221.0588159123 883265.0157119888 0.9834473357954052 1.0723186949741634 0.9148248670888407 0.8364436168170023 1.1653974907786475 1.1472611911892074 0.9995219353329289 0.8839389215522336 0.8346544306655774 1.0 19.752486844914564 -7.21214059382301 5.476243935073063 0.8943364287782184 1.0197704531109657 0.20137851462266554 0.10060307845220759 0.3232263758663418 23.068850060756898 0.053336998451827475 0.029664645867577256 6.135633446145387e-08 7.21214059382301 0.1254340243327473 SAS(ph)LSSLLITPFPS(ph)PNSSLTR ddPTM_KYSE-520_SHP099_60min_R1 1 SASLSSLLITPFPSPNSSLTR 21 0 A0A087WX11;J3KNG8;Q8TF40-3;Q8TF40;Q8TF40-2 A0A087WX11 FNIP1 Folliculin-interacting protein 1 2 S(0.4)AS(0.552)LS(0.022)S(0.026)LLIT(0.022)PFPS(0.909)PNS(0.028)S(0.024)LT(0.018)R 83.77600000000001 0.0039889 11133000.0 29908.0 27192.0 23312.0 23061.0 24826.0 27003.0 17134.0 20274.0 28232.0 26464.0 True False 28248.943619880112 25885.655503975868 24814.728820518798 25252.71050645753 26779.664959382408 26834.464260745743 18866.071931725495 20203.674225987175 23105.780470803995 26229.549548680465 1.0769892775875458 0.9868890602156034 0.9460600447775191 0.9627580702287708 1.0209731169679817 1.0230623370387124 0.7192678584400087 0.7702638655113148 0.8809064916620493 1.0 14.678905411343539 -6.744383129841195 24.99999774602917 0.823464865372795 0.998494396394867 0.5017469489925223 0.07719005741586328 180.38031851415457 264390.37391245365 0.029014920590171203 0.022416774136884948 1.801427839731569e-07 6.744383129841195 0.17502953102207208 SAS(ph)LSSLLITPFPSPNSSLTR ddPTM_KYSE-520_SHP099_60min_R1 1 SASLSSLLITPFPSPNSSLTR 21 0 A0A087WX11;J3KNG8;Q8TF40-3;Q8TF40;Q8TF40-2 A0A087WX11 FNIP1 Folliculin-interacting protein 1 1 S(0.064)AS(0.622)LS(0.308)S(0.005)LLITPFPSPNSSLTR 199.76 1.5955999999999998e-13 154840000.0 90508.0 100670.0 89757.0 78872.0 71569.0 92043.0 67167.0 87408.0 104740.0 87633.0 True False 85487.34081677515 95833.6620912494 95542.8798362776 86367.97116626851 77201.07312809324 91468.52549538265 73956.89584674948 87104.80204918062 85721.85628053312 86856.6397974423 0.9842349533223886 1.1033544737022103 1.1000066322976851 0.9943738483055135 0.8888332925166489 1.0530976757642903 0.8514823509086212 1.0028571477358215 0.9869349825234363 1.0 16.40634852021442 -5.444734687105314 5.517305910300289 0.9610671768806671 1.0652500958589877 0.3319867418642246 0.06238258801494884 0.2355459394272358 12.386325547294152 0.017088736361850668 0.02535235498336006 3.5914126902426424e-06 5.444734687105314 0.10418291897832055 SAS(ph)LVTR ddPTM_KYSE-520_SHP099_60min_R1 3 SASLVTR 7 0 Q9H2K8 Q9H2K8 TAOK3 Serine/threonine-protein kinase TAO3 1 S(0.386)AS(0.614)LVTR;S(0.035)AS(0.965)LVTR;S(0.074)AS(0.925)LVTR 83.99799999999999 0.0099095 1583290000.0 2753690.0 2458040.0 2335320.0 2091840.0 2441720.0 2363460.0 1954310.0 2234380.0 2627010.0 2443680.0 True False 2600937.3263550815 2339952.0688067405 2485858.463844115 2290647.844665373 2633869.4725136245 2348708.7694590255 2151870.7270275736 2226629.45728821 2150011.20553297 2422030.8963542692 1.0738662872839932 0.9661115687371796 1.026352912172145 0.9457550058974645 1.087463201430759 0.9697270059578468 0.8884571746242582 0.9193233086497018 0.8876894216210233 1.0 21.2077858380446 -6.532058673737939 7.933744781218505 0.9185786678807588 1.0147224802489274 0.45273023825949466 0.04953614490978804 0.11999863450964934 53.32693876854746 0.017555017772762433 0.013960914752729639 2.9372527985583213e-07 6.532058673737939 0.0961438123681686 SAS(ph)MKLPDNTVK ddPTM_KYSE-520_SHP099_60min_R1 18 SASMKLPDNTVK 12 1 E9PDI4;O00515 E9PDI4 LAD1 Ladinin-1 1 S(0.11)AS(0.889)MKLPDNTVK;S(0.003)AS(0.997)MKLPDNTVK;S(0.005)AS(0.994)MKLPDNTVK;SAS(0.997)MKLPDNT(0.003)VK;SAS(1)MKLPDNTVK;S(0.002)AS(0.998)MKLPDNTVK;SAS(1)MKLPDNTVK;S(0.078)AS(0.922)MKLPDNTVK;SAS(0.96)MKLPDNT(0.039)VK;S(0.001)AS(0.999)MKLPDNTVK;S(0.001)AS(0.999)MKLPDNTVK;S(0.001)AS(0.999)MKLPDNTVK;S(0.156)AS(0.844)MKLPDNTVK;SAS(1)MKLPDNTVK;S(0.01)AS(0.99)MKLPDNTVK;S(0.001)AS(0.999)MKLPDNTVK;SAS(1)MKLPDNTVK;S(0.025)AS(0.975)MKLPDNTVK 203.2 1.4317e-08 83763100000.0 55896560.0 58030050.0 62114660.0 54142360.0 56657640.0 49408020.0 51384360.0 56487550.0 68134840.0 55234060.0 True False 52795866.38977016 55242199.29311917 66118670.370569944 59288033.61590595 61116273.93012589 49099646.22020552 56578792.57182668 56291607.87334328 55763270.59554253 54744729.19984846 0.9644009050996695 1.0090870865659902 1.207763219162165 1.0829907186036472 1.1163864507762524 0.8968835345036548 1.0335020996319642 1.0282562119879681 1.0186052869487368 1.0 25.706216733522773 -6.220706453340144 24.999558613351386 0.9995935910656962 1.0800958993505336 0.2476422416508468 0.06995300444020675 803.330997570343 493039.310666495 0.02424361549014153 0.024243266913477966 6.015802178871259e-07 6.220706453340144 0.0805023082848374 SAS(ph)PDDDLGSSNWEAADLGNEER ddPTM_KYSE-520_SHP099_60min_R1 2 SASPDDDLGSSNWEAADLGNEER 23 0 E9PM92;O00193;E9PQA1 E9PM92 C11orf58;SMAP Small acidic protein 1 S(0.188)AS(0.733)PDDDLGS(0.039)S(0.039)NWEAADLGNEER;S(0.231)AS(0.768)PDDDLGS(0.001)SNWEAADLGNEER 97.689 0.00015686 520800000.0 664320.0 616840.0 571760.0 558170.0 607910.0 599180.0 555690.0 633800.0 684290.0 621070.0 True False 627468.8453109114 587206.0805042832 608616.5644483451 611218.3089800699 655749.0584652456 595440.2953654643 611864.5682117738 631601.4957300328 560040.1855471262 615567.8029851485 1.0193334386042443 0.95392591629496 0.9887075988979704 0.9929341755953024 1.0652751090704244 0.9673025334949661 0.993984034325031 1.0260469970442414 0.9097944740307317 1.0 19.231558248519402 -9.717164108780286 9.275018665904902 1.0000001123713207 0.9923604735397488 0.0033634284958508065 0.04014652561107574 0.0 0.0 0.037382653657307384 0.009066625270291806 1.9179438617766317e-10 9.717164108780286 -0.007639638831571927 SAS(ph)PDGGPR ddPTM_KYSE-520_SHP099_60min_R1 1 SASPDGGPR 9 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 S(0.015)AS(0.985)PDGGPR 99.788 0.002553 192320000.0 463440.0 375480.0 375560.0 442150.0 362330.0 418810.0 459310.0 385290.0 472050.0 393400.0 True False 437732.05935526465 357441.37719302997 399769.1985172458 484171.8030627555 390843.3096243065 416196.051440319 505741.53723361937 383953.5189173621 386337.6194121223 389914.78206056834 1.1226352000352438 0.9167166612767863 1.025273256901419 1.2417374907000718 1.0023813602521843 1.0674025981802049 1.297056589034521 0.9847113692081563 0.9908257834454443 1.0 18.572799324225517 -3.935142064112821 20.808346787366553 1.0657714650075432 2.3944999737260653 0.024421357767089202 0.11351155715458157 1885.2741975076233 873528.2604761674 0.027867250373056453 51032.38339572631 0.00011610687490487357 3.935142064112821 1.328728508718522 SAS(ph)PDYNR ddPTM_KYSE-520_SHP099_60min_R1 5 SASPDYNR 8 0 Q14669-3;Q14669;Q14669-2;G5E9G6;C9JLD7;C9JLJ5;C9JSX9;F8W9P3 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.001)AS(0.999)PDYNR;S(0.003)AS(0.986)PDY(0.011)NR;SAS(1)PDYNR;SAS(1)PDYNR;S(0.022)AS(0.978)PDYNR 172.98 0.00010466 2630680000.0 4413450.0 4128090.0 4067400.0 3530460.0 4093700.0 3716050.0 3725205.0 4046760.0 4533780.0 4183920.0 True False 4168627.130505546 3929770.360010582 4329591.112070104 3865993.856928492 4415850.900033186 3692856.753551242 4101785.07589725 4032722.7340808865 3710559.83929306 4146853.7238405044 1.0052505846878237 0.9476510679453444 1.0440665141331202 0.932271576087352 1.064867775452556 0.8905201387550259 0.9891318452627947 0.9724776909531503 0.8947891790734828 1.0 21.98358572782635 -6.269722603881536 24.993902914802167 0.9501478871268741 0.9947950960018055 0.19611037419540356 0.049701691198720546 1135.013566391624 3424794.9345685113 0.016281028564680878 0.014599940312751393 5.373749232760369e-07 6.269722603881536 0.04464720887493134 SAS(ph)PHDVDLCLVSPCEFEHR ddPTM_KYSE-520_SHP099_60min_R1 5 SASPHDVDLCLVSPCEFEHR 20 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 1 S(0.125)AS(0.875)PHDVDLCLVSPCEFEHR;S(0.155)AS(0.845)PHDVDLCLVSPCEFEHR;S(0.24)AS(0.76)PHDVDLCLVSPCEFEHR;S(0.028)AS(0.972)PHDVDLCLVSPCEFEHR;S(0.055)AS(0.945)PHDVDLCLVSPCEFEHR 275.2 6.3005e-36 4744200000.0 566522.0 668778.0 673068.0 1315220.0 606371.0 601872.0 524486.0 569600.0 697217.0 513803.0 True False 535095.8953263917 636648.9010237564 716455.0402268769 1440218.1133646872 654088.9479209571 598115.493594918 577506.1633700817 567624.19054564 570619.9682102781 509251.1051526847 1.0507505823987524 1.2501669502177615 1.4068796964359418 2.828109941819131 1.2844134088326562 1.174500138621378 1.1340302603701422 1.1146253484819708 1.1205080606338471 1.0 18.958017680499978 -5.985104714154027 24.99914203894794 1.1299197419759777 1.6485805644851692 0.23593885888923827 0.4455388762896605 385.01922640940575 646184.1876071255 0.1472859110825626 0.16694817943051274 1.034892610274119e-06 5.985104714154027 0.5186608225091915 SAS(ph)PPKAK ddPTM_KYSE-520_SHP099_60min_R1 2 SASPPKAK 8 1 P52701-2;P52701;A0A087WWJ1;P52701-3;F8WAX8;F8W7G9 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 S(0.005)AS(0.995)PPKAK;S(0.003)AS(0.997)PPKAK 76.332 0.010161 8212900000.0 11021600.0 9744300.0 8791900.0 5887600.0 7684700.0 9310300.0 7067600.0 5316300.0 12287700.0 9530900.0 True False 10410209.876985123 9276169.201507516 9358639.941537382 6447155.733828516 8289442.170038108 9252190.96421958 7782061.981128924 5297858.996133752 10056563.427709632 9446463.64092799 1.1020219071062298 0.9819726782536216 0.990703007736133 0.6824941034966147 0.8775180305699858 0.9794343487581214 0.8238069056246786 0.5608298721629661 1.0645849928578888 1.0 23.171342915319997 -5.041477852576385 14.470239366555827 0.841560108205715 1.028095151651469 0.2252976038020862 0.14393216035049822 5.353339851466321 1867.5742337379634 0.038340897995581255 0.06658714072438418 9.089126490908265e-06 5.041477852576385 0.1865350434457539 SAS(ph)PPQKR ddPTM_KYSE-520_SHP099_60min_R1 3 SASPPQKR 8 1 U3KQ90;P55199 U3KQ90 ELL RNA polymerase II elongation factor ELL 1 S(0.001)AS(0.999)PPQKR;S(0.058)AS(0.942)PPQKR;S(0.036)AS(0.964)PPQKR 85.37700000000001 0.0033953000000000004 6622100000.0 683560.0 495370.0 555550.0 522420.0 609410.0 620310.0 541820.0 554580.0 709160.0 732550.0 True False 645641.5641569237 471571.6816344706 591361.6419114291 572070.6397286995 657367.0999314125 616438.4151976883 596592.453253619 552656.2914199453 580394.4204688077 726060.1769152757 0.8892397416698752 0.6494939353897362 0.8144802052412183 0.7879107791852556 0.9053892787844235 0.8490183524686284 0.8216845823830876 0.7611714689654918 0.7993750916551565 1.0 19.4697296002603 -11.63520290375315 1.9560803788743595 4.38143727405618 0.8065423032180988 0.4180240342223053 0.06769587609424221 3265618.758725469 99467.84163578307 49273738.93258158 0.017346059584776953 2.3163122087509326e-12 11.63520290375315 -3.5748949708380815 SAS(ph)PSNIK ddPTM_KYSE-520_SHP099_60min_R1 7 SASPSNIK 8 0 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 SAS(0.994)PS(0.006)NIK;S(0.007)AS(0.831)PS(0.161)NIK;SAS(1)PSNIK;SAS(1)PSNIK;SAS(1)PSNIK;SAS(1)PSNIK;SAS(1)PSNIK 175.64 7.952399999999999e-05 6447160000.0 12055130.0 11192530.0 9941460.0 8961850.0 9942650.0 10738920.0 9694770.0 10080880.0 13035740.0 10913710.0 True False 11386407.90759414 10654824.058469974 10582302.418498406 9813581.529521544 10725079.989060014 10671894.416879892 10674811.963437269 10045911.780175077 10668778.220263492 10817023.020137891 1.0526378548327238 0.9850052124909087 0.9783008133381514 0.9072349676294249 0.9915001538864522 0.9865833138204647 0.9868530318891001 0.9287131738069478 0.9862952311741952 1.0 23.36680017030499 -4.23603168651451 2.288728556949079 0.9679205993036221 1.0769491169665237 0.42820656761064424 0.028182432905416055 0.61535201795491 3.5959614983156545 0.007391661153524325 0.13821342772271894 5.807220459748203e-05 4.23603168651451 0.10902851766290167 SAS(ph)PSVPGPTKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SASPSVPGPTKPK 13 1 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ6 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.014)AS(0.853)PS(0.134)VPGPTKPK;S(0.001)AS(0.982)PS(0.017)VPGPTKPK 131.96 1.8807e-05 505290000.0 1494770.0 1275530.0 1101620.0 1237100.0 1301740.0 1461890.0 1503690.0 1602720.0 1573900.0 1426950.0 True False 1411852.128349879 1214251.624190436 1172632.1878543203 1354673.6120523214 1404179.5321125623 1452765.802249437 1655697.6598001816 1597160.5383976602 1288119.4347902527 1414308.3331503007 0.9982633173100589 0.8585480236022873 0.8291206099608712 0.9578347099425301 0.9928383360259379 1.0271917149872647 1.1706765922196034 1.1292873703431172 0.9107769533684579 1.0 20.43166524549314 -5.857958838449539 1.8430472605526722 1.0625989695834592 0.893717995391569 0.40303240394309525 0.0787985085554085 0.31631164506041404 2.209754833023526 0.02912163328608167 0.03560387156673839 1.386887269006412e-06 5.857958838449539 -0.1688809741918902 SAS(ph)PSVPGPTKPKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SASPSVPGPTKPKPK 15 2 Q03164-2;Q03164;Q03164-3;A0A3B3ITZ6 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 S(0.112)AS(0.777)PS(0.112)VPGPTKPKPK;S(0.161)AS(0.725)PS(0.114)VPGPTKPKPK 94.882 0.0011184 7766700000.0 4794800.0 4026100.0 3406500.0 4171100.0 4055000.0 3815600.0 3605900.0 4048900.0 4975900.0 3473970.0 True False 4528822.885803168 3832680.1127006914 3626088.4405927127 4567520.089913059 4374105.430206067 3791785.425075042 3970419.562192656 4034855.310920364 4072401.9922312885 3443193.3285077624 1.315297299256183 1.1131178958114814 1.0531178747852112 1.3265360536384885 1.2703630069188565 1.1012409305283928 1.1531212985689034 1.1718352488412322 1.1827398591052154 1.0 21.715315756984552 -13.788832827991767 0.2511367697508172 6.850806249260274e-12 1.2004465415705137 0.3098815214632381 0.0857898971042992 221.64903537058777 2.4277368261556385 113.39559301947342 0.1290257689509827 1.6261745950585024e-14 13.788832827991767 1.200446541563663 SAS(ph)PTVPR ddPTM_KYSE-520_SHP099_60min_R1 4 SASPTVPR 8 0 K7EKI0;Q92817;K7EQ87 K7EKI0 EVPL Envoplakin 1 S(0.008)AS(0.963)PT(0.029)VPR;S(0.001)AS(0.965)PT(0.034)VPR;S(0.001)AS(0.987)PT(0.012)VPR;S(0.003)AS(0.96)PT(0.037)VPR 134.26 0.00074872 5387360000.0 7056920.0 6355630.0 5478600.0 4568210.0 5374370.0 5527740.0 4981000.0 5997520.0 7325550.0 5523560.0 True False 6665458.579978747 6050295.994804877 5831759.322069931 5002371.304917583 5797302.343017654 5493239.324248957 5484528.089875369 5976716.002951698 5995414.782087637 5474625.555664651 1.2175186251929009 1.1051524772401236 1.065234373159229 0.9137376162177117 1.0589404305503827 1.0034000076160545 1.0018088057548469 1.091712290125035 1.0951278258444763 1.0 22.384328862355897 -4.427064608915207 1.9363163248190007 1.0262682384407562 1.2395041130150566 0.5777968153351136 0.05053081036446526 0.40913425349848154 2.1161333347236226 0.01442327523751551 0.13854819558727519 3.7405493690540934e-05 4.427064608915207 0.21323587457430038 SAS(ph)QS(ph)SLDKLDQELK ddPTM_KYSE-520_SHP099_60min_R1 3 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 S(0.096)AS(0.89)QS(0.549)S(0.466)LDKLDQELK;S(0.405)AS(0.602)QS(0.641)S(0.352)LDKLDQELK;S(0.393)AS(0.601)QS(0.556)S(0.45)LDKLDQELK 104.17 0.0025834 6877500000.0 8756000.0 7606400.0 7221500.0 7883400.0 8220300.0 8627100.0 9327800.0 10283400.0 11575900.0 9296500.0 True False 8270287.225346751 7240977.126560829 7687009.444808534 8632635.965769362 8867190.84289097 8573255.068839744 10270745.054555213 10247729.285563605 9474008.364691846 9214140.242567565 0.8975647220062493 0.7858548856364156 0.8342622580559411 0.9368900123625463 0.962345982311648 0.9304454721920712 1.1146721000735733 1.112174225243616 1.0282031871974056 1.0 23.135418125776933 -5.989260698025433 0.9631517881620769 1.0677036820334893 0.8327462881574954 0.717626240400278 0.05439385287209831 0.28131068154015865 0.5659200140657887 0.02907706258569704 0.03532426124932587 1.0250364332940537e-06 5.989260698025433 -0.2349573938759939 SAS(ph)QS(ph)SLDKLDQELKEQQK ddPTM_KYSE-520_SHP099_60min_R1 5 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 S(0.158)AS(0.836)QS(0.622)S(0.384)LDKLDQELKEQQK;S(0.067)AS(0.932)QS(0.64)S(0.361)LDKLDQELKEQQK;S(0.1)AS(0.9)QS(0.684)S(0.317)LDKLDQELKEQQK;S(0.003)AS(0.996)QS(0.7)S(0.301)LDKLDQELKEQQK;S(0.001)AS(0.999)QS(0.559)S(0.441)LDKLDQELKEQQK 189.09 5.178e-13 11193940000.0 10248700.0 10717030.0 10903740.0 8048730.0 9181520.0 9665850.0 7641790.0 8348430.0 15635600.0 8934320.0 True False 9680184.180723066 10202167.79221001 11606612.527000852 8813678.879261088 9904053.388297308 9605521.844785001 8414296.709883314 8319471.244868206 12796569.181400659 8855168.875595786 1.0931676534595476 1.152114424415604 1.310716112821727 0.995314601345544 1.1184488435440427 1.0847361557674111 0.9502130143528392 0.9395045268753797 1.445096006770361 1.0 23.078088389984185 -5.279633056562764 24.95379971073733 1.0705350880279483 1.1820109270614128 0.1052781172170747 0.1450603253973403 1772.476283465705 2431060.198869213 0.04034643908536967 0.05998252299780418 5.252510671553153e-06 5.279633056562764 0.11147583903346447 SAS(ph)QSS(ph)LDKLDQELK ddPTM_KYSE-520_SHP099_60min_R1 7 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 S(0.02)AS(0.926)QS(0.353)S(0.701)LDKLDQELK;SAS(1)QS(0.043)S(0.957)LDKLDQELK;S(0.132)AS(0.868)QS(0.101)S(0.899)LDKLDQELK;S(0.003)AS(0.973)QS(0.044)S(0.981)LDKLDQELK;S(0.007)AS(0.924)QS(0.072)S(0.997)LDKLDQELK;S(0.006)AS(0.861)QS(0.384)S(0.749)LDKLDQELK;S(0.067)AS(0.885)QS(0.171)S(0.877)LDKLDQELK 237.81 3.5661999999999996e-18 48722400000.0 39856500.0 33233200.0 32521000.0 34757600.0 37566300.0 38921000.0 41703300.0 44673300.0 48363600.0 41463000.0 True False 37645580.49303706 31636627.18794982 34617355.69543975 38060951.85374653 40522554.08699141 38678079.60198814 45919076.54898615 44518338.74912662 39581989.38714144 41095670.077725835 0.9160473699987496 0.7698287222988272 0.8423601715209073 0.9261547939663809 0.9860541027886764 0.9411716496855942 1.1173701867407837 1.0832853842005097 0.9631669057172808 1.0 25.292483060880873 -5.724702152089993 1.2272047165418518 1.0368187724848894 0.8314321282057797 0.6379585222258684 0.05876718924597436 0.2767389597385285 0.8762670778065712 0.024007382962803265 0.03617269469668017 1.8849413770929377e-06 5.724702152089993 -0.2053866442791097 SAS(ph)QSS(ph)LDKLDQELKEQQK ddPTM_KYSE-520_SHP099_60min_R1 4 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 S(0.107)AS(0.853)QS(0.246)S(0.793)LDKLDQELKEQQK;S(0.231)AS(0.767)QS(0.204)S(0.798)LDKLDQELKEQQK;S(0.123)AS(0.756)QS(0.276)S(0.845)LDKLDQELKEQQK;S(0.104)AS(0.851)QS(0.092)S(0.953)LDKLDQELKEQQK 148.09 1.0072e-06 7378750000.0 6836420.0 7297040.0 7450030.0 5683890.0 6301070.0 5888500.0 5352490.0 5447750.0 10695000.0 6303660.0 True False 6457190.154534594 6946479.245319667 7930270.854269471 6224085.196676162 6796928.360815907 5851747.6872718325 5893571.924468396 5428853.026764411 8753057.599009948 6247814.476573274 1.0335118270150936 1.111825466547718 1.2692871857838792 0.9962019871130798 1.0878889548179742 0.9366071462610601 0.9433013650720359 0.8689203316008133 1.4009791154699458 1.0 22.57492018386336 -5.325011247930999 24.999808003626562 1.0224338812141123 1.1355722023831765 0.09364836438411472 0.14656972320468198 466.03011600202876 183266.2619587347 0.04071512202198986 0.06039029556298404 4.731390048251338e-06 5.325011247930999 0.1131383211690642 SAS(ph)QSSLDKLDQELK ddPTM_KYSE-520_SHP099_60min_R1 7 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.103)AS(0.603)QS(0.172)S(0.121)LDKLDQELK;S(0.001)AS(0.982)QS(0.014)S(0.004)LDKLDQELK;S(0.02)AS(0.976)QS(0.003)S(0.001)LDKLDQELK;S(0.01)AS(0.881)QS(0.108)S(0.001)LDKLDQELK;S(0.056)AS(0.856)QS(0.084)S(0.004)LDKLDQELK;SAS(0.965)QS(0.017)S(0.017)LDKLDQELK;S(0.002)AS(0.986)QS(0.01)S(0.002)LDKLDQELK 176.46 1.0780000000000001e-08 12104630000.0 11239900.0 10712080.0 9576800.0 9141700.0 9296130.0 11553750.0 10876370.0 12381140.0 13774900.0 12137590.0 True False 10616400.340814853 10197455.597640118 10194135.851421777 10010524.419447677 10027682.543255612 11481638.76060405 11975859.622741984 12338192.715119796 11273725.396970743 12030060.39550213 0.8824893634602347 0.8476645388623987 0.8473885846186792 0.8321258655684282 0.8335521363637395 0.9544123955434898 0.9954945552243104 1.0256135305632275 0.9371295759401034 1.0 23.520140549624337 -6.381282396300807 3.6210295157161623 0.9902361538196234 0.847520741445203 0.8826505449144267 0.02461775576284993 0.07736931313503453 1.8389092504251872 0.00916029967179771 0.007951593051607711 4.1564025605693174e-07 6.381282396300807 -0.14271541237442043 SAS(ph)QSSLDKLDQELKEQQK ddPTM_KYSE-520_SHP099_60min_R1 1 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 S(0.001)AS(0.894)QS(0.085)S(0.02)LDKLDQELKEQQK 199.85 2.8476999999999996e-13 1097900000.0 246620.0 257250.0 285300.0 172650.0 161340.0 223270.0 195220.0 189480.0 383580.0 222740.0 True False 232939.4969752184 244891.32385987783 303690.89449613966 189058.6040908845 174036.54010097327 221876.48911219882 214954.74276359586 188822.73810496464 313931.54126491235 220766.6968890975 1.0551387517123378 1.1092765680273748 1.3756191435373029 0.8563728440701288 0.7883278707947549 1.0050269911120644 0.9736737732302926 0.855304449293002 1.4220058808173242 1.0 17.752163029448276 -5.277647783674778 24.88560940279841 0.9718528593942106 1.1729380247881025 0.19331879421556752 0.18003987409817296 1183.9345510493465 1817753.5831164524 0.050707206660618974 0.0754617505166897 5.276576225252955e-06 5.277647783674778 0.20108516539389187 SAS(ph)S(ph)GAEGDVSSEREP ddPTM_KYSE-520_SHP099_60min_R1 2 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 2 S(0.003)AS(0.998)S(0.999)GAEGDVSSEREP;S(0.006)AS(0.994)S(1)GAEGDVSSEREP 178.02 6.0638e-06 0.0 734870.0 747820.0 725690.0 633360.0 694710.0 669910.0 678130.0 712190.0 892670.0 700840.0 True False 694105.2961729731 711893.6046992954 772469.1385450545 693554.3439733733 749379.7246408031 665728.8431995028 746681.9983110199 709719.5791163954 730583.630379449 694631.1028452688 0.9992430418532342 1.0248513229299954 1.1120566519134465 0.9984498838772335 1.0788168303597105 0.9583919298640964 1.074933148332325 1.0217215673316713 1.0517577277880525 1.0 19.40588748480556 SAS(ph)SDTSEELNSQDSPPK ddPTM_KYSE-520_SHP099_60min_R1 1 SASSDTSEELNSQDSPPK 18 0 O14745;O14745-2;J3QRP6 O14745 SLC9A3R1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1 1 S(0.001)AS(0.997)S(0.002)DTSEELNSQDSPPK 286.84 1.5408e-32 0.0 298090.0 298660.0 207280.0 206790.0 227720.0 304490.0 258560.0 331730.0 334860.0 306890.0 True False 281554.3534723175 284311.9253022006 220641.60045972627 226443.2594263194 245640.26845043793 302589.5649651691 284697.7681024247 330579.3060563641 274057.86513365794 304171.1933568068 0.9256443727136293 0.9347102273708399 0.7253862472140927 0.7444599106421331 0.8075724257105786 0.9948002032204859 0.9359787327673107 1.086819900359793 0.9009987504378018 1.0 18.214524003011526 -6.262937398073736 24.93888373634754 0.9861619681359713 0.8232153261084804 0.5072317747290068 0.07688285226378122 115.90135085703942 1929501.266792322 0.02810756895741768 0.02613678319607618 5.458365357172087e-07 6.262937398073736 -0.16294664202749098 SAS(ph)SGAEGDVSSER ddPTM_KYSE-520_SHP099_60min_R1 1 SASSGAEGDVSSER 14 0 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 S(0.001)AS(0.603)S(0.397)GAEGDVSSER 188.59 1.3752999999999999e-08 539110000.0 1062700.0 896290.0 845690.0 955740.0 920610.0 1004200.0 1056400.0 1100500.0 1009100.0 969280.0 True False 1003749.9125600709 853230.8830412814 900204.5305518414 1046573.2422462901 993056.7694456235 997932.415310924 1163191.2214704568 1096682.6223586302 825872.8773409016 960692.9332884299 1.0448186697119317 0.8881411046927259 0.9370366944102128 1.089394129988959 1.033688013136948 1.038763147653251 1.2107835721127664 1.1415537518369274 0.8596637372088891 1.0 19.873715849855 -5.257636164828541 24.3710530656283 1.064430315312685 0.9498130424252301 0.17387580243352407 0.09416354796484738 352.31829513717275 2257647.659999041 0.02612005612626067 0.043117278560953085 5.525401422627416e-06 5.257636164828541 -0.11461727288745494 SAS(ph)SSWLEGTSTQAK ddPTM_KYSE-520_SHP099_60min_R1 1 SASSSWLEGTSTQAK 15 0 K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-3;Q9BZL4-4;Q9BZL4 K7EL81 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 S(0.015)AS(0.587)S(0.397)S(0.001)WLEGTSTQAK 132.65 2.6906e-05 451740000.0 561310.0 509810.0 456320.0 429330.0 427360.0 411010.0 440570.0 497530.0 538860.0 473590.0 True False 530173.0153562557 485317.9623595894 485735.1173378149 470133.3941172289 460990.80065421975 408444.7341335818 485107.11514884495 495804.1845543754 441016.607555166 469394.36104744516 1.1294831368940692 1.0339237166731425 1.0348124256412148 1.0015744395994333 0.9820970145988268 0.8701526222474097 1.0334745267632468 1.0562636147737208 0.9395438977388764 1.0 18.840440984943502 -3.8668062889281067 0.8777957668011824 0.9827807343067517 1.3120627620959802 0.44987810761074565 0.048970108756724584 4.105673131278421 1.5432162899354183 0.017928039112631206 1.5264902798583537 0.00013589194387284367 3.8668062889281067 0.32928202778922844 SAS(ph)TDLGTADVVLGR ddPTM_KYSE-520_SHP099_60min_R1 1 SASTDLGTADVVLGR 15 0 B5MCU0;H7C0E9;A0A0U1RRA6;B5MCG9;Q9Y2K5;Q9Y2K5-3;Q9Y2K5-2 B5MCU0 R3HDM2 R3H domain-containing protein 2 1 SAS(0.972)T(0.028)DLGTADVVLGR 146.77 7.5835e-06 171750000.0 192580.0 244430.0 205260.0 167470.0 178110.0 201070.0 161290.0 206790.0 242830.0 240810.0 True False 181897.20350128785 232687.21590309014 218491.38802761177 183386.2984483086 192126.24369272531 199815.04754687072 177594.7672387068 206072.6937551488 198738.19324615112 238676.6107473452 0.7621073675033786 0.9749058157583977 0.9154285681511507 0.7683463321943808 0.8049646887943432 0.8371790051870144 0.7440811509876117 0.8633971008298347 0.8326672338100548 1.0 17.86469767004745 -1.0006972415882762 24.9969534581072 0.8449315125430902 0.00023484434466958248 0.0 0.08423428831470312 0.0 0.0 0.018917830254895848 0.0 0.09983958299710546 1.0006972415882762 -0.8446966681984206 SAS(ph)TEKLEQGTSALIR ddPTM_KYSE-520_SHP099_60min_R1 6 SASTEKLEQGTSALIR 16 1 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 S(0.003)AS(0.893)T(0.104)EKLEQGTSALIR;S(0.002)AS(0.973)T(0.025)EKLEQGTSALIR;SAS(0.5)T(0.5)EKLEQGTSALIR;S(0.01)AS(0.961)T(0.03)EKLEQGTSALIR;SAS(0.942)T(0.057)EKLEQGTSALIR;S(0.003)AS(0.735)T(0.262)EKLEQGTSALIR 237.97 7.726999999999999e-23 7693550000.0 6000030.0 6876310.0 5556290.0 4216270.0 4932560.0 4854530.0 4397430.0 5104470.0 7724590.0 6049500.0 True False 5667196.375136733 6545961.746048259 5914457.343778324 4616983.0331321955 5320724.409572676 4824231.077573528 4841965.139181019 5086763.784962253 6321999.177067434 5995906.136439788 0.9451776339016817 1.0917385291049735 0.9864159326700491 0.770022566743121 0.887392879157375 0.8045874914976621 0.8075451864988752 0.848372817921169 1.054385948213204 1.0 22.515546367961385 -5.064657914038727 7.894057425911437 0.8697054378713177 1.023606933101904 0.28997012566485325 0.0898302714880543 0.3146613353523886 35.18284157621838 0.023891203420413388 0.041798427065317015 8.616722086643122e-06 5.064657914038727 0.15390149523058627 SAS(ph)TLCLPSVGAAR ddPTM_KYSE-520_SHP099_60min_R1 4 SASTLCLPSVGAAR 14 0 Q8IUC4-2;A8MT19;Q8IUC4 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 S(0.002)AS(0.975)T(0.022)LCLPSVGAAR;SAS(0.99)T(0.01)LCLPSVGAAR;SAS(0.854)T(0.146)LCLPSVGAAR;S(0.001)AS(0.849)T(0.151)LCLPSVGAAR 229.9 1.1241e-14 814420000.0 815000.0 897310.0 758760.0 599820.0 760550.0 873290.0 709170.0 986780.0 952770.0 981650.0 True False 769790.3253377785 854201.8807102314 807670.8836589237 656826.7124575403 820400.9580624466 867839.4731795231 780859.824432227 983357.0904961836 779770.9853771573 972953.3447121441 0.7911893509811891 0.8779474219937583 0.8301229324597054 0.6750855177458357 0.8432068839900732 0.8919641192417919 0.8025665656797248 1.0106929544366976 0.8014474585190503 1.0 19.892011100649558 -7.666776593889893 0.4936725253625787 0.991881485566382 0.8001747942708848 0.33531396330769525 0.0773049270779744 1.052489267422919 0.6586662055663597 0.08482104201462044 0.04860164115805992 2.1538894354579927e-08 7.666776593889893 -0.19170669129549722 SAS(ph)TLCLPSVGAARPQVK ddPTM_KYSE-520_SHP099_60min_R1 4 SASTLCLPSVGAARPQVK 18 1 Q8IUC4-2;A8MT19;Q8IUC4 Q8IUC4-2 RHPN2;RHPN2P1 Rhophilin-2;Putative rhophilin-2-like protein RHPN2P1 1 S(0.035)AS(0.919)T(0.045)LCLPSVGAARPQVK;S(0.041)AS(0.775)T(0.185)LCLPSVGAARPQVK;SAS(0.995)T(0.005)LCLPSVGAARPQVK;S(0.012)AS(0.494)T(0.494)LCLPSVGAARPQVK 254.39 1.2937000000000001e-24 8904880000.0 4982180.0 4942310.0 4374060.0 3339820.0 3694690.0 4443090.0 3367170.0 4173590.0 5956000.0 4908740.0 True False 4705808.543670399 4704874.00904145 4656018.906343446 3657235.488646502 3985441.0830895277 4415359.027229446 3707556.404012381 4159112.7904132316 4874540.538541674 4865252.38254193 0.9672280436172919 0.9670359601331333 0.9569943222371607 0.751705194528001 0.8191643042795796 0.9075292872931229 0.762048114362221 0.8548606451203741 1.0019090799961523 1.0 22.214083215357785 -5.043058760722712 24.2005857003533 0.8593827219822417 0.9658528739100163 0.20866436722467918 0.08069374833631095 416.8597027284677 234289.85378620413 0.021629580361669766 0.03746798204438968 9.056100621506083e-06 5.043058760722712 0.10647015192777454 SAS(ph)VNKEPVSLPGIMR ddPTM_KYSE-520_SHP099_60min_R1 11 SASVNKEPVSLPGIMR 16 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.046)AS(0.954)VNKEPVSLPGIMR;S(0.062)AS(0.938)VNKEPVSLPGIMR;S(0.035)AS(0.965)VNKEPVSLPGIMR;SAS(1)VNKEPVSLPGIMR;S(0.004)AS(0.996)VNKEPVSLPGIMR;SAS(1)VNKEPVSLPGIMR;SAS(1)VNKEPVSLPGIMR;SAS(1)VNKEPVSLPGIMR;SAS(1)VNKEPVSLPGIMR;S(0.008)AS(0.992)VNKEPVSLPGIMR;S(0.028)AS(0.972)VNKEPVSLPGIMR 231.93 9.622100000000001e-20 28251840000.0 12713160.0 12456850.0 10724730.0 9561010.0 10446440.0 13559490.0 11521780.0 13449020.0 16083620.0 13988820.0 True False 12007935.671743855 11858404.22788694 11416063.255974723 10469685.515777526 11268515.395887021 13474860.19327257 12686513.964136582 13402368.48864487 13163240.043065768 13864889.937937267 0.8660678682264622 0.8552829687771153 0.8233792916551009 0.7551221511777209 0.8127374574430615 0.9718692505738907 0.9150100737131421 0.9666408134963379 0.9493937638154893 1.0 23.724932828254104 -6.2592963894020945 24.995473656144412 0.9556495400263767 0.8206418634681926 0.8028518551836056 0.034158289077716654 91.6052462862385 1068470.3332434883 0.01239521581948408 0.01181810308157788 5.5043191942431e-07 6.2592963894020945 -0.13500767655818413 SAS(ph)VS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 5 SASVSPTR 8 0 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 2 S(0.008)AS(0.992)VS(0.983)PT(0.017)R;S(0.035)AS(0.965)VS(0.998)PT(0.002)R;S(0.03)AS(0.97)VS(0.999)PT(0.001)R;S(0.02)AS(0.98)VS(0.985)PT(0.015)R;S(0.01)AS(0.99)VS(0.997)PT(0.003)R 106.16 0.0017572 6213630000.0 7132490.0 7518380.0 6277060.0 10237500.0 8844280.0 8877050.0 9525400.0 8813440.0 11937600.0 7818300.0 True False 6736836.561433693 7157185.739481551 6681689.331251106 11210468.921983393 9540274.518930417 8821645.038175492 10488320.390945366 8782868.233712351 9770032.762406843 7749035.944545349 0.8693773792823666 0.9236227307113719 0.8622607223746894 1.446692079144967 1.231156312501808 1.1384183918239748 1.3535000309720122 1.1334143107046406 1.2608062257452943 1.0 22.88558540557726 -5.239844709475668 24.972657551250244 1.2311854643964915 0.8889404637106709 0.6379065496142817 0.11670064506104028 474.6993388232855 548954.4122778435 0.030045936170452234 0.05198098090337741 5.756457339832049e-06 5.239844709475668 -0.34224500068582053 SAS(ph)WGSADQLK ddPTM_KYSE-520_SHP099_60min_R1 12 SASWGSADQLK 11 0 Q86VQ1;H7C0Q2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 SAS(0.995)WGS(0.005)ADQLK;S(0.014)AS(0.986)WGSADQLK;SAS(1)WGSADQLK;S(0.015)AS(0.977)WGS(0.008)ADQLK;SAS(1)WGSADQLK;SAS(1)WGSADQLK;SAS(1)WGSADQLK;SAS(1)WGSADQLK;SAS(1)WGSADQLK;SAS(0.999)WGSADQLK;SAS(1)WGSADQLK;SAS(1)WGSADQLK 279.38 2.3739e-21 70368800000.0 50226300.0 45007740.0 42868160.0 40659390.0 43699080.0 42633300.0 43997900.0 44202770.0 51840400.0 43962670.0 True False 47440147.01535326 42845500.61240497 45631510.185081154 44523646.200908616 47137948.98224645 42367209.76068032 48445637.110124044 44049440.907874025 42427490.15013701 43573194.94623971 1.0887461218734262 0.9832994956019966 1.0472381068540184 1.021812751069587 1.081810710470162 0.972322773506801 1.1118220082299661 1.0109297920940135 0.9737062017711516 1.0 25.37693756502728 -7.517546368796229 24.73968931427141 0.9886747075642828 1.0410854115134893 0.23196959084258073 0.04214603347975917 306.0817780550775 1420112.6270348246 0.02488087134394463 0.010018984351953123 3.03706181331882e-08 7.517546368796229 0.05241070394920655 SASAPT(ph)LAETEKETAEHLDLAGASSRPK ddPTM_KYSE-520_SHP099_60min_R1 2 SASAPTLAETEKETAEHLDLAGASSRPK 28 2 Q86W92-2 Q86W92-2 PPFIBP1 Liprin-beta-1 1 SAS(0.148)APT(0.761)LAET(0.092)EKETAEHLDLAGASSRPK;S(0.001)AS(0.013)APT(0.986)LAETEKETAEHLDLAGASSRPK 225.71 8.089e-23 2378400000.0 1034030.0 1253630.0 1025300.0 1246440.0 945640.0 815150.0 806870.0 998840.0 1099200.0 856170.0 True False 976670.2946122998 1193403.7330630058 1091392.478538003 1364901.2828441504 1020056.4880444054 810062.3464854596 888436.2938923392 995375.2571710091 899612.9885770663 848584.9998901796 1.1509398525058732 1.406345543719782 1.2861321831982024 1.6084438011758284 1.2020675455922705 0.9546036597280114 1.0469620533091168 1.1729823851468344 1.0601330316862667 1.0 19.694699651326932 -5.997491718584214 24.99984532768392 1.0600365964734813 1.3661608558792018 0.6112784297338341 0.11861226946967116 53.987257493212425 538075.5711924419 0.03644619426759239 0.041083456211405286 1.0057922419337364e-06 5.997491718584214 0.3061242594057205 SASAS(ph)HQADIK ddPTM_KYSE-520_SHP099_60min_R1 1 SASASHQADIK 11 0 C9JXK0;A0A494C1L1;Q14739 C9JXK0 LBR Lamin-B receptor 1 S(0.002)AS(0.244)AS(0.754)HQADIK 171.93 1.1154e-05 977390000.0 310320.0 363890.0 330270.0 548000.0 341850.0 426330.0 319510.0 403350.0 590530.0 263660.0 True False 293105.9309924167 346408.17818997474 351559.7326506841 600081.7552377924 368751.6501395666 423669.1163309165 351809.18891710084 401950.87299259775 483304.6380498682 261324.17752437625 1.121618113444845 1.325587940127208 1.3453012116258958 2.29631165750753 1.4110889150513812 1.6212396432067475 1.3462557971096423 1.5381312085258696 1.8494447878049312 1.0 17.995481082374102 -5.017755262704396 24.98171608200052 1.6056055444759585 1.2515632120035527 0.17112089199127245 0.32179996850814035 1159.4086697143175 1631296.5771823332 0.08436578237727209 0.15024146645744538 9.59941433429676e-06 5.017755262704396 -0.3540423324724058 SASAS(ph)PLTPCSVTR ddPTM_KYSE-520_SHP099_60min_R1 1 SASASPLTPCSVTR 14 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SAS(0.089)AS(0.911)PLTPCSVTR 158.52 1.9162e-05 0.0 925440.0 841580.0 799480.0 723700.0 773840.0 864590.0 703350.0 936290.0 1066200.0 865950.0 True False 874103.9983810965 801149.2335626663 851015.7600132274 792480.2304116616 834736.8054526898 859193.773106624 774451.4820344999 933042.228521729 872604.9567147637 858278.3566989064 1.01843882180958 0.9334375349321763 0.9915381803246067 0.9233370784971017 0.9725711931770461 1.0010665728671506 0.9023313660304568 1.087109119365864 1.016692253630815 1.0 19.71108609267593 -7.26746263502288 24.996754709654567 1.0389255112627784 0.963465877057386 0.4009961952094022 0.039859034583978714 452.1034349621364 1876233.8906288005 0.019630357015117398 0.009806512991317032 5.4017858759163756e-08 7.26746263502288 -0.07545963420539248 SASDS(ph)GCDPASKK ddPTM_KYSE-520_SHP099_60min_R1 1 SASDSGCDPASKK 13 1 Q7LBC6;H0Y9V5 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 S(0.274)AS(0.029)DS(0.697)GCDPASKK 185.95 3.2116e-08 636670000.0 292400.0 302800.0 284840.0 323360.0 355860.0 438050.0 488700.0 561510.0 681210.0 451760.0 True False 276179.9891150511 288253.0334879341 303201.24216011405 354092.03717827087 383864.1574335709 435315.96746360266 538102.5652523778 559562.2528674189 557519.4359066449 447757.7578639611 0.6168067091290037 0.6437700484812412 0.6771546373792443 0.7908116184686006 0.8573031973020498 0.9722131215331427 1.201771618250477 1.2496986217208692 1.245136295496709 1.0 18.772358903040914 -6.164562623418381 1.0507401113799204 1.2050538483851931 0.6435712031565052 0.8904227637813029 0.07766465811449892 0.1468605698294996 0.34282080167151047 0.04070906757126645 0.04050372223883109 6.846007594538289e-07 6.164562623418381 -0.561482645228688 SASNKS(ph)PLVLEANR ddPTM_KYSE-520_SHP099_60min_R1 5 SASNKSPLVLEANR 14 1 Q92560;F8W6N3 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 S(0.001)AS(0.108)NKS(0.892)PLVLEANR;S(0.007)AS(0.031)NKS(0.962)PLVLEANR;S(0.031)AS(0.114)NKS(0.855)PLVLEANR;S(0.001)AS(0.023)NKS(0.976)PLVLEANR;SAS(0.003)NKS(0.996)PLVLEANR 144.33 3.0306e-06 6142230000.0 4761320.0 4046150.0 3829390.0 3462560.0 3917930.0 4405230.0 3646430.0 4516610.0 5189670.0 4372500.0 True False 4497200.088143895 3851766.8806050345 4076238.6066406304 3791640.661343376 4226248.801027674 4377735.325532897 4015046.730127338 4500942.934094699 4247356.748934455 4333763.051753524 1.0377124993772426 0.8887811434560401 0.9405771746084055 0.8749072379047593 0.9751914792198094 1.010146441615349 0.926457372537424 1.0385761474138582 0.9800620611262753 1.0 22.047188845643365 -5.980857936917735 24.836380334107684 0.9897832033123201 0.9315869311415076 0.2267414972381253 0.04836614626715276 312.98950874462815 406094.44931441196 0.01442015730145259 0.01634845426035909 1.0450620159915638e-06 5.980857936917735 -0.05819627217081247 SASPS(ph)NIK ddPTM_KYSE-520_SHP099_60min_R1 1 SASPSNIK 8 0 E7EUC4;Q9NRH2 E7EUC4 SNRK SNF-related serine/threonine-protein kinase 1 SAS(0.458)PS(0.542)NIK 89.679 0.0044792 377090000.0 1038500.0 902390.0 846700.0 739810.0 777650.0 879770.0 771800.0 795820.0 975220.0 864980.0 True False 980892.3348015756 859037.8298849958 901279.6367678983 810121.3199680131 838846.630776755 874279.0290958881 849821.0760421237 793059.486165785 798144.6312956045 857316.950144258 1.144142005633417 1.0020072853341442 1.0512793857817029 0.9449496126627341 0.9784556699078503 1.019785073593583 0.9912565894085344 0.9250481820432215 0.9309796466304594 1.0 19.70946914186203 -1.0000000006856264 0.6834447122597956 0.9686955383588032 19.670517323702356 0.6651202032450012 0.035550510701726025 165.1761403709066 0.9357931978279251 0.014742968764254712 4706.081826019443 0.09999999984212868 1.0000000006856264 18.701821785343554 SASQS(ph)S(ph)LDKLDQELK ddPTM_KYSE-520_SHP099_60min_R1 2 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 S(0.001)AS(0.009)QS(0.996)S(0.994)LDKLDQELK;S(0.003)AS(0.289)QS(0.716)S(0.993)LDKLDQELK 167.71 1.2378000000000001e-07 4556050000.0 7310000.0 6302800.0 5814800.0 6540100.0 6752500.0 7331900.0 7643300.0 8358200.0 9346700.0 7825100.0 True False 6904499.727876271 6000004.027304319 6189631.31200896 7161669.137647232 7283883.33353056 7286138.892469782 8415959.355419489 8329207.355018537 7649574.891132887 7755775.701835687 0.8902397378823204 0.7736175281454051 0.7980673436112855 0.9233981761427373 0.9391560062530642 0.9394468293797166 1.0851215505661858 1.0739360800554258 0.9863068744139076 1.0 22.886839650421216 -5.906084631789642 1.0742288597054486 1.0371577570920811 0.8158931015970708 0.7482572774272482 0.048984690576811485 0.24172178086031357 0.5968319103663565 0.023481864549505186 0.030325263615918124 1.2414103680259165e-06 5.906084631789642 -0.2212646554950103 SASQS(ph)S(ph)LDKLDQELKEQQK ddPTM_KYSE-520_SHP099_60min_R1 1 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 S(0.037)AS(0.141)QS(0.868)S(0.954)LDKLDQELKEQQK 60.541000000000004 0.03592 384880000.0 1587700.0 1623400.0 1682800.0 1212300.0 1332600.0 1437700.0 1170900.0 1224800.0 2314200.0 1429200.0 True False 1499627.1159985173 1545409.4272269208 1791275.9805751978 1327516.6275087155 1437468.0385431803 1428726.7810122643 1289265.9988827691 1220551.4546704697 1893999.6162345773 1416538.399900776 1.0586561692246121 1.0909760210772768 1.2645445973795493 0.9371554118135476 1.0147752003361648 1.0086043421853879 0.9101525232023912 0.8616437470074694 1.3370619648343072 1.0 20.43393828053226 -5.281100856668669 24.981531919853808 1.000139808624615 1.133350664826897 0.16593957977019835 0.13024402152983847 1342.085259285604 1705227.1725088614 0.03605038592687159 0.05355902697201306 5.234788544185243e-06 5.281100856668669 0.133210856202282 SASQS(ph)SLDKLDQELK ddPTM_KYSE-520_SHP099_60min_R1 3 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SAS(0.005)QS(0.497)S(0.497)LDKLDQELK;SASQS(0.685)S(0.315)LDKLDQELK;SASQS(0.703)S(0.297)LDKLDQELK 237.09 7.408299999999999e-19 24692500000.0 12345800.0 10950200.0 9575700.0 9129000.0 8328400.0 9328700.0 8081700.0 9028500.0 9129500.0 8150100.0 True False 11660953.86325785 10424135.9554147 10192964.943661716 9996617.415266076 8983797.697886113 9270476.122994432 8898677.105791163 8997182.24076775 7471812.9359664675 8077896.454681846 1.4435631762151777 1.2904517919851526 1.2618340679217301 1.2375273032216405 1.1121456864774761 1.1476349288460341 1.1016082164105485 1.1138026206752252 0.9249701302665125 1.0 22.945548222511196 -1.0000000000000435 0.20721515672324822 0.9578206863521058 3.3288086160419517 0.8847419560519352 0.04831358371225499 15.763122783091449 0.19449249762099013 0.08134917463821564 12.2717434534343 0.09999999999998999 1.0000000000000435 2.370987929689846 SASQS(ph)SLDKLDQELKEQQK ddPTM_KYSE-520_SHP099_60min_R1 2 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SASQS(0.5)S(0.5)LDKLDQELKEQQK;S(0.042)AS(0.133)QS(0.412)S(0.412)LDKLDQELKEQQK 259.93 3.5515e-35 3991200000.0 2670200.0 2806200.0 2933700.0 2332600.0 2471400.0 2617100.0 2141660.0 2322680.0 3326200.0 2801920.0 True False 2522078.6830882686 2671385.9398079277 3122810.996085962 2554289.6026782384 2665885.119657528 2600765.708136046 2358159.893387373 2314623.1651975857 2722245.926678534 2777097.168660773 0.9081708452803312 0.9619346308635562 1.1244874797059787 0.9197696182557482 0.9599538502799757 0.9365051167403836 0.8491456186693574 0.8334685553382308 0.9802487134403401 1.0 21.40514622624057 -5.988823977223568 1.6870508116450622 0.9045669271278788 0.990267842694014 0.12099944447739919 0.07300259239871135 0.6144393621242296 3.5534903482940146 0.028713692655742598 0.03204164727678939 1.0260677148439305e-06 5.988823977223568 0.08570091556613524 SASQSS(ph)LDKLDQELK ddPTM_KYSE-520_SHP099_60min_R1 13 SASQSSLDKLDQELK 15 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SASQS(0.126)S(0.873)LDKLDQELK;S(0.009)AS(0.118)QS(0.075)S(0.797)LDKLDQELK;SASQS(0.022)S(0.978)LDKLDQELK;SAS(0.001)QS(0.075)S(0.924)LDKLDQELK;SASQS(0.139)S(0.861)LDKLDQELK;SASQS(0.016)S(0.984)LDKLDQELK;SASQS(0.012)S(0.988)LDKLDQELK;SASQS(0.367)S(0.633)LDKLDQELK;SASQS(0.245)S(0.755)LDKLDQELK;SASQS(0.017)S(0.983)LDKLDQELK;SASQS(0.036)S(0.964)LDKLDQELK;SASQS(0.067)S(0.933)LDKLDQELK;SASQS(0.137)S(0.863)LDKLDQELK 286.23 3.644e-33 28394350000.0 32141590.0 28684260.0 25725470.0 23413450.0 24169020.0 26558410.0 22063770.0 24245180.0 25792470.0 22602460.0 True False 30358631.93002881 27306225.093647942 27383774.9584073 25638657.248489577 26070984.371087257 26392649.111848027 24294191.193244267 24161079.129447542 21109207.62325725 22402219.788847808 1.3551617748675886 1.2189071150547959 1.2223688195416864 1.1444694985651789 1.1637679041103695 1.1781265142745685 1.0844546398628905 1.0785127258449327 0.9422819623332934 1.0 24.417138357195036 -3.11158086193391 0.19111786449658932 0.9455560395291372 1.8548013092785571 0.8380605685694311 0.04533012235022647 9.785582493307752 0.23105235114828324 0.10420569064096312 2.260580222450167 0.0007734266599105381 3.11158086193391 0.9092452697494199 SASQSS(ph)LDKLDQELKEQQK ddPTM_KYSE-520_SHP099_60min_R1 4 SASQSSLDKLDQELKEQQK 19 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SAS(0.001)QS(0.497)S(0.502)LDKLDQELKEQQK;SASQS(0.02)S(0.98)LDKLDQELKEQQK;SASQS(0.173)S(0.827)LDKLDQELKEQQK;SASQS(0.004)S(0.996)LDKLDQELKEQQK 277.15 7.017399999999999e-36 7298660000.0 1935280.0 1852910.0 1803610.0 1287560.0 1308830.0 1244380.0 905144.0 911010.0 1698220.0 1067656.0 True False 1827926.1605149668 1763893.4223253902 1919873.586478033 1409929.3152809697 1411827.4747759798 1236613.3628406771 996644.7888741537 907849.9189413333 1389866.056642419 1058197.3984637999 1.7273961958029693 1.6668850489389402 1.8142868138450734 1.3323878109394183 1.3341815778658592 1.1686036694437978 0.9418325827685808 0.8579211404783945 1.3134279659542796 1.0 20.013177345378068 -5.724120485530171 1.107522208128987 1.0240533067268083 1.7522171961375936 0.818054406873343 0.1357397589541449 0.19811606858720726 0.5146109230182293 0.0577882000779316 0.09036941896480447 1.8874676397309384e-06 5.724120485530171 0.7281638894107854 SASS(ph)GAEGDVSS(ph)EREP ddPTM_KYSE-520_SHP099_60min_R1 2 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 2 SAS(0.001)S(0.999)GAEGDVS(0.015)S(0.985)EREP;S(0.008)AS(0.05)S(0.942)GAEGDVS(0.455)S(0.545)EREP 235.79 1.2252e-14 504240000.0 1248270.0 1168970.0 1131800.0 1165260.0 1180910.0 1191380.0 1135720.0 1263510.0 1464980.0 1090980.0 True False 1179025.974735446 1112810.9265402574 1204757.6389440265 1276005.9600518066 1273840.8985412174 1183944.1555000274 1250529.6611590562 1259127.1787154519 1198976.5611404958 1081314.7659695954 1.0903633353034208 1.0291276523375874 1.114159980848631 1.1800504350901333 1.1780481859960428 1.0949116693494942 1.1564899514136653 1.1644409364801518 1.1088136395376005 1.0 20.044355115710392 -4.928624528170541 6.1547474038952865 1.1359772126669192 1.0608952625337673 0.18147035402080347 0.05268284226076098 0.2616076739376233 17.15549167449162 0.013021291138741837 0.02759714994436163 1.1786245198709673e-05 4.928624528170541 -0.07508195013315189 SASS(ph)GAEGDVSSER ddPTM_KYSE-520_SHP099_60min_R1 3 SASSGAEGDVSSER 14 0 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SAS(0.014)S(0.986)GAEGDVSSER;SAS(0.023)S(0.977)GAEGDVSSER;SAS(0.106)S(0.894)GAEGDVSSER 342.38 4.1888999999999993e-54 1312250000.0 1796510.0 1511930.0 1399410.0 1621400.0 1624220.0 1647710.0 1778990.0 1784720.0 1774300.0 1818490.0 True False 1696854.009046101 1439294.6133468016 1489618.2077351657 1775497.3685083126 1752036.8734523514 1637426.0307030082 1958827.6704692612 1778529.2228767779 1452131.846463148 1802379.5933638124 0.9414520755193598 0.7985524351508114 0.8264730766037277 0.9850851480151698 0.9720687472845243 0.908480120798001 1.0868008479908868 0.9867672877706509 0.8056748155659093 1.0 20.78147145383378 -5.262770324005712 24.89392698582793 0.966197831507086 0.8497985162079403 0.2989177623862256 0.07561187921780424 131.6267518562815 2461961.7713157493 0.02106628512207358 0.03329994111700776 5.460465606611928e-06 5.262770324005712 -0.11639931529914571 SASS(ph)GAEGDVSSEREP ddPTM_KYSE-520_SHP099_60min_R1 6 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SAS(0.226)S(0.774)GAEGDVSSEREP;SAS(0.226)S(0.774)GAEGDVSSEREP;SAS(0.043)S(0.957)GAEGDVSSEREP;SAS(0.021)S(0.979)GAEGDVSSEREP;SAS(0.018)S(0.982)GAEGDVSSEREP;SAS(0.001)S(0.999)GAEGDVSSEREP 330.35 5.4561e-49 10448270000.0 6041830.0 6345290.0 5528750.0 4485320.0 4806330.0 5944020.0 5216110.0 5592260.0 7134960.0 5486190.0 True False 5706677.6458104905 6040452.743925532 5885142.071312771 4911603.464239365 5184560.826723132 5906921.166357736 5743405.303127858 5572861.755303297 5839431.12170472 5437586.624791235 1.049487215484974 1.110870163683589 1.082307736391918 0.9032690057471842 0.9534672612084011 1.0863130233965737 1.056241619571139 1.0248777885938058 1.073901258893308 1.0 22.374535048558883 -5.061118443599647 24.999992725691456 1.0154109945139955 1.0842831252977612 0.24522538280957817 0.053640418869200956 342.3625113862026 140039.76181520894 0.01580339992738477 0.02737236741387657 8.68723473092121e-06 5.061118443599647 0.06887213078376564 SASS(ph)SWLEGTSTQAK ddPTM_KYSE-520_SHP099_60min_R1 1 SASSSWLEGTSTQAK 15 0 K7EL81;Q9BZL4-5;Q9BZL4-2;Q9BZL4-3;Q9BZL4-4;Q9BZL4 K7EL81 PPP1R12C Protein phosphatase 1 regulatory subunit 12C 1 SAS(0.311)S(0.572)S(0.117)WLEGTSTQAK 261.61 5.4829e-25 647210000.0 1733300.0 1472300.0 1226200.0 1068100.0 1069500.0 1329700.0 1143300.0 1368800.0 1574300.0 1334000.0 True False 1637150.3937521116 1401568.4980326465 1305242.8139893694 1169611.9028640245 1153663.5653774072 1321400.849072829 1258875.9215327261 1364051.9522803223 1288446.8048734323 1322181.7978362967 1.2382188262092624 1.0600421971670335 0.9871886121298543 0.884607475899345 0.8725453392758367 0.9994093484233818 0.9521201423229632 1.0316674715326928 0.9744853597152293 1.0 20.334489128018937 -4.341971050213933 1.91714465182483 0.957896040357812 1.2957437192790924 0.7620897645683391 0.047296209556500615 0.33378313225918105 1.4816654914041183 0.014130452302504601 0.189221133847686 4.550183903673901e-05 4.341971050213933 0.3378476789212804 SASSASSLFS(ph)PSSTLFSSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SASSASSLFSPSSTLFSSSR 20 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2;E9PR38;Q14671-4;H0YDK8 Q5T1Z4 PUM1 Pumilio homolog 1 1 SASSASSLFS(1)PSSTLFSSSR 414.11 1.7126999999999997e-107 978980000.0 379880.0 531140.0 317070.0 276530.0 262140.0 482830.0 312230.0 394960.0 472500.0 386610.0 True False 358807.2991279942 505623.2371426062 337508.83952993696 302811.32805822394 282768.9266274275 479816.4788733057 343793.2554711483 393589.97594435676 386705.9107556991 383184.9361780286 0.9363815360458 1.3195279600127403 0.8807988197456947 0.7902485183225917 0.7379437444692566 1.2521799099387922 0.8971992972902807 1.0271540939738142 1.0091887082326083 1.0 18.547681321188293 -4.791196676636074 24.99968543981092 0.9460308699226019 1.1279553960730757 0.1666508870180735 0.15963040913253612 312.1331982881358 262228.5563887241 0.042227483411192285 0.08792269063778206 1.617347432225919e-05 4.791196676636074 0.18192452615047383 SASSEEASES(ph)PTAR ddPTM_KYSE-520_SHP099_60min_R1 1 SASSEEASESPTAR 14 0 A0A075B6Q3;Q5H9F3-3 A0A075B6Q3 BCORL1 BCL-6 corepressor-like protein 1 1 SASSEEASES(0.999)PT(0.001)AR 241.07 1.9061000000000002e-18 103530000.0 170880.0 192920.0 132240.0 105560.0 187870.0 222210.0 124260.0 130950.0 174020.0 290450.0 True False 161400.94575916528 183651.83362117645 140764.4019914812 115592.39066222875 202654.30016592197 220823.10496538586 136821.41346073357 130495.76501395971 142422.35468721003 287876.83896668046 0.5606597124607381 0.6379527935640309 0.48897439091226647 0.4015341806487172 0.7039618084363419 0.7670749260621986 0.4752776011847539 0.4533041472956551 0.4947336340027491 1.0 18.135092196467564 -10.242931625986612 4.222355203910875 1.0002817685222805 0.5552499832784674 0.5943493800621791 0.1106009942852852 75378095.42483038 102.15520858874261 207261.74909437186 0.029735246680558085 5.7156861562765244e-11 10.242931625986612 -0.44503178524381304 SASSGAEGDVSS(ph)EREP ddPTM_KYSE-520_SHP099_60min_R1 3 SASSGAEGDVSSEREP 16 1 Q8TEA8 Q8TEA8 DTD1 D-tyrosyl-tRNA(Tyr) deacylase 1 1 SASSGAEGDVS(0.001)S(0.999)EREP;SASSGAEGDVS(0.005)S(0.995)EREP;SASSGAEGDVS(0.132)S(0.868)EREP 265.08 6.1939e-28 2016780000.0 2243010.0 2205690.0 1877780.0 1662760.0 1692170.0 2060560.0 1776780.0 2091970.0 2469050.0 2030730.0 True False 2118585.7639704184 2099725.341591812 1998824.70335423 1820788.2104729787 1825334.1518697413 2047699.280714079 1956394.262101742 2084713.4443394702 2020732.759685417 2012739.3120840322 1.0525882568353029 1.0432177326619179 0.9930867307821425 0.9046319111180358 0.9068904954113269 1.0173693475454844 0.9720057885072313 1.0357592917390352 1.003971427175588 1.0 20.940728897312123 -9.681555162465608 14.101769671324854 1.000003412540164 0.9900448306792167 0.0005994299634838329 0.0493093291727993 0.0 0.0 0.052869929303906486 0.0128228413493497 2.081827962401548e-10 9.681555162465608 -0.009958581860947335 SASVS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 3 SASVSPTR 8 0 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 1 SAS(0.056)VS(0.943)PT(0.001)R;SASVS(0.999)PT(0.001)R;S(0.001)AS(0.049)VS(0.95)PT(0.001)R 133.32 0.00076331 3428190000.0 2182440.0 2369780.0 1951870.0 2455320.0 2273090.0 2757630.0 2590780.0 3017380.0 3844550.0 2554700.0 True False 2061375.702613719 2255932.2116877018 2077690.6633024183 2688672.874581123 2451969.2508870787 2740418.608279092 2852681.325976176 3006913.4130417863 3146476.633218675 2532067.3455265267 0.8141077709704714 0.8909447908932279 0.8205511069731742 1.06184887986146 0.968366522801631 1.082285039977576 1.1266214269601031 1.1875329534003838 1.242651242581538 1.0 21.271884346035556 -5.690976007812328 0.7714111248191252 1.1586288734936783 0.8159969517976576 0.7136020417792405 0.07502383616853543 0.37413613642523785 0.47345580775459506 0.040652483367503524 0.07730825351078026 2.0371546152760997e-06 5.690976007812328 -0.34263192169602064 SASVVSSDSISTSADNFS(ph)PDLR ddPTM_KYSE-520_SHP099_60min_R1 4 SASVVSSDSISTSADNFSPDLR 22 0 Q13614 Q13614 MTMR2 Myotubularin-related protein 2 1 SASVVSSDSISTSADNFS(1)PDLR;SASVVSSDSISTSADNFS(1)PDLR;SASVVSSDSIS(0.001)T(0.001)S(0.003)ADNFS(0.996)PDLR;SASVVSSDS(0.018)IS(0.015)T(0.015)S(0.015)ADNFS(0.937)PDLR 412.67 3.8522e-108 770810000.0 942592.0 1160424.0 917825.1 1015063.4 864932.0 914521.0 822183.0 986438.0 1187220.0 1010320.0 True False 890304.5427494337 1104675.4892080666 976989.5745180824 1111534.7203460599 932997.2276101093 908813.1352146592 905297.2813728179 983016.2768143606 971650.7753807007 1001369.3508170651 0.8890870706428069 1.1031648694926692 0.97565356251508 1.110014720781204 0.9317213741850919 0.9075703530102205 0.9040593070220719 0.9816720234269909 0.9703220640694509 1.0 19.933542773576367 -5.829822691625452 24.999870631128694 0.943966554253511 1.02233205537957 0.21519347162473712 0.06517567572980366 69.70112104376076 25480.499599565424 0.01930367713871178 0.021888319882278812 1.4797123835171927e-06 5.829822691625452 0.07836550112605911 SAT(ph)FPNAGPR ddPTM_KYSE-520_SHP099_60min_R1 6 SATFPNAGPR 10 0 Q86X27;Q86X27-3 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 S(0.001)AT(0.999)FPNAGPR;S(0.019)AT(0.981)FPNAGPR;S(0.14)AT(0.86)FPNAGPR;S(0.001)AT(0.999)FPNAGPR;S(0.005)AT(0.995)FPNAGPR;S(0.001)AT(0.999)FPNAGPR 184.58 2.0275e-05 3702530000.0 2930630.0 2897090.0 2413430.0 2123570.0 2353070.0 2822800.0 2157290.0 2628000.0 3123970.0 2725350.0 True False 2768062.111833934 2757909.447779256 2569003.5594245335 2325393.4543253994 2538243.221863127 2805181.8581355046 2375369.9263214706 2618884.0813798113 2556735.7968750885 2701205.519290218 1.0247506500583796 1.0209920822699703 0.951058163134354 0.8608724651711918 0.9396705299677042 1.0384925686338031 0.8793740088853492 0.9695241856561739 0.9465165751426825 1.0 21.365171979767485 -4.770363909643056 5.703201442775565 0.9441531160984066 1.0238683301927682 0.2705010769992199 0.04881778725511939 0.1889282990304341 20.501919812579903 0.012799822570058118 0.030312320471583103 1.6968212342291178e-05 4.770363909643056 0.07971521409436166 SAT(ph)PVNCEQPDILVSSTPINEGQTVLDK ddPTM_KYSE-520_SHP099_60min_R1 1 SATPVNCEQPDILVSSTPINEGQTVLDK 28 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 S(0.174)AT(0.826)PVNCEQPDILVSSTPINEGQTVLDK 143.27 2.3608000000000003e-06 250620000.0 137470.0 203550.0 129660.0 92516.0 115840.0 200450.0 128990.0 161850.0 180040.0 154780.0 True False 129844.26506034908 193771.15246522118 138018.0910633351 101308.69282405025 124955.94896056001 199198.9171968477 142029.56802108514 161288.58012607414 147349.2744390603 153408.76961701794 0.8463940189632105 1.2631034910779035 0.8996753667205247 0.6603839733345457 0.8145293732066957 1.2984845500954345 0.9258243083212208 1.051364798301479 0.960500985744915 1.0 17.227021431341235 SATAS(ph)PQQPQAQQR ddPTM_KYSE-520_SHP099_60min_R1 1 SATASPQQPQAQQR 14 0 Q9BX66-4;Q9BX66-9;Q9BX66-8;Q9BX66-10;Q9BX66-6;Q9BX66-5;Q9BX66-12;A0A0U1RQI5 Q9BX66-4 SORBS1 Sorbin and SH3 domain-containing protein 1 1 SATAS(1)PQQPQAQQR 136.33 0.00070938 0.0 47333.0 53948.0 36907.0 25421.0 40084.0 43246.0 26958.0 41332.0 56202.0 51981.0 True False 44707.34413400378 51356.25710240109 39286.08427328789 27837.004196897655 43238.38275323793 42976.08567271083 29683.17772472603 41188.62893896131 45997.13353712549 51520.48878060603 0.8677585401874732 0.9968123035690849 0.7625332213089646 0.5403093964313552 0.839246361527421 0.8341552397866306 0.5761431699751213 0.7994611447565698 0.8927930348836344 1.0 15.652858660075182 -9.94692462325267 7.206293069766225 1.0000000055521678 0.7845970021951171 0.18581760888601828 0.1315056333678193 1.2377770568341415e-08 1.8057497880637592e-09 0.13434948668942748 0.03258453575643619 1.129992020622664e-10 9.94692462325267 -0.21540300335705076 SATDGNTS(ph)TTPPTSAK ddPTM_KYSE-520_SHP099_60min_R1 1 SATDGNTSTTPPTSAK 16 0 A0A669KAU9;A0A669KAX4;K4DI93;Q13620-1;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 SATDGNT(0.12)S(0.475)T(0.29)T(0.113)PPT(0.002)SAK 113.59 0.00020211 518260000.0 1048200.0 1473800.0 1024200.0 885370.0 950150.0 1440600.0 998570.0 1348300.0 1547900.0 1444000.0 True False 990054.2564651037 1402996.4357810996 1090221.5707779394 969515.2986038037 1024921.3993860139 1431608.6810365617 1099515.2007040468 1343623.061995585 1266840.3793835898 1431207.2834150016 0.691761611289971 0.9802887758043068 0.7617495965899247 0.6774108194100611 0.71612366095598 1.0002804608572158 0.768243156281664 0.9388039577255141 0.8851550673783491 1.0 20.448801203721523 -6.250945083112418 24.886067828073124 0.9052809424103642 0.7723029211456511 0.3640860663925941 0.10016078606810969 893.0238364245364 2117708.6810611677 0.0337020933886748 0.03336245769096988 5.611189254873505e-07 6.250945083112418 -0.13297802126471303 SATDGNTST(ph)TPPTSAK ddPTM_KYSE-520_SHP099_60min_R1 1 SATDGNTSTTPPTSAK 16 0 A0A669KAU9;A0A669KAX4;K4DI93;Q13620-1;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 SATDGNT(0.017)S(0.179)T(0.774)T(0.031)PPTSAK 209.89 4.4639e-17 429030000.0 2274400.0 2859300.0 1969600.0 1755200.0 1870500.0 2960900.0 1965900.0 2725500.0 2968600.0 2656700.0 True False 2148234.4980960037 2721934.9361031987 2096563.5674714248 1922013.6802798787 2017697.7083108344 2942419.9248099145 2164632.3573350725 2716045.8766364823 2429577.072316124 2633163.704881321 0.8158378053417785 1.0337127657719551 0.7962146689113347 0.7299256315575356 0.7662636791516059 1.1174466362859623 0.822065241641569 1.0314762700099183 0.9226836401444426 1.0 21.328365786446362 -6.238416667742069 24.99519832185254 0.9709098327166926 0.8325398191752098 0.34305783321061756 0.10366257457720197 1052.173326988714 1142319.6339014333 0.03494946687056144 0.03492696897810281 5.775416805580039e-07 6.238416667742069 -0.13837001354148282 SATDGNTSTT(ph)PPTSAK ddPTM_KYSE-520_SHP099_60min_R1 3 SATDGNTSTTPPTSAK 16 0 A0A669KAU9;A0A669KAX4;K4DI93;Q13620-1;Q13620 A0A669KAU9 CUL4B Cullin-4B 1 SATDGNT(0.015)S(0.042)T(0.246)T(0.697)PPTSAK;SATDGNT(0.01)S(0.052)T(0.029)T(0.905)PPT(0.003)S(0.001)AK;SATDGNT(0.062)S(0.195)T(0.195)T(0.546)PPT(0.002)SAK 197.49 1.2626e-07 1146040000.0 2839950.0 3999150.0 2745190.0 2381120.0 2550600.0 3887680.0 2749640.0 3663210.0 3990560.0 3712560.0 True False 2682412.312200029 3807024.831153466 2922149.339859301 2607420.9288901673 2751317.709071167 3863415.5470583225 3027600.4451003685 3650503.179509644 3265974.8978312397 3679669.60672797 0.7289818377431118 1.0346105052998882 0.79413361854999 0.7086019147269947 0.7477078116036862 1.0499354452895413 0.8227913831080521 0.9920736287940098 0.8875728657430755 1.0 21.811144803504916 -6.24880964793379 24.8148695818051 0.9419990661087954 0.8099696182343773 0.3368272877397137 0.10301446602067359 962.7982146710312 1891704.901831023 0.03465811271289395 0.03442956010668573 5.638847533897043e-07 6.24880964793379 -0.13202944787441806 SATLSSTESTASEMQEEMKGS(ph)VEEPKPEEPK ddPTM_KYSE-520_SHP099_60min_R1 1 SATLSSTESTASEMQEEMKGSVEEPKPEEPK 31 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SATLSSTESTASEMQEEMKGS(1)VEEPKPEEPK 227.95 3.9252e-23 636850000.0 284970.0 304370.0 239820.0 259780.0 246610.0 242660.0 256060.0 343290.0 396780.0 301780.0 True False 269162.14602638874 289747.608331316 255279.18092556729 284469.41309429484 266016.8039810401 241145.46892984307 281945.04370477586 342099.20711448794 324734.7540098337 299106.46398128755 0.8998874261815614 0.9687106205415973 0.8534726315427869 0.9510640770106913 0.889371631893861 0.8062195170243108 0.9426243751202069 1.1437372585030128 1.085682835761615 1.0 18.19029956327248 -7.119663250096692 5.139018679125739 1.0842233105099301 0.8968756020068511 0.6921296816741197 0.05404148366017418 0.12148783301087263 4.589752688076502 0.025923436512809785 0.014728084165237007 7.59166000622919e-08 7.119663250096692 -0.18734770850307902 SATPEPVTDNRDVEDMELS(ph)DVEDDGSK ddPTM_KYSE-520_SHP099_60min_R1 1 SATPEPVTDNRDVEDMELSDVEDDGSK 27 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 SATPEPVTDNRDVEDMELS(1)DVEDDGSK 220.24 1.2642000000000002e-22 526530000.0 381020.0 378710.0 317790.0 323630.0 328960.0 333590.0 302720.0 308070.0 434910.0 336170.0 True False 359884.06105546065 360516.20314470073 338275.25188197783 354387.6978970929 354847.2804736342 331507.94107107207 333321.89186249225 307001.37707407854 355941.30718891247 333191.7953363026 1.0801108133296518 1.0820080451885636 1.0152568479081074 1.06361471938226 1.06499405279615 0.9949462913288998 1.0003904553713825 0.9213953685870653 1.068277527151135 1.0 18.345993350010126 -6.266178186087333 20.96740088680285 0.9923008813447208 1.0599351812282654 0.42353433176046096 0.03723078120890246 40.693339704689194 180048.9488515405 0.012503534434574635 0.011433557739008789 5.417785592127684e-07 6.266178186087333 0.06763429988354452 SATRPS(ph)PS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 3 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.001)AT(0.013)RPS(0.992)PS(0.994)PER;SAT(0.001)RPS(0.999)PS(1)PER;S(0.003)AT(0.073)RPS(0.925)PS(0.999)PER 137.4 0.00034886 10317210000.0 1337840.0 1213220.0 1105620.0 1110080.0 1225090.0 1255410.0 1092400.0 1182180.0 1415040.0 1218850.0 True False 1263627.3482820787 1154935.0901196531 1176890.034254548 1215581.6694422772 1321497.6131914046 1247574.5205193067 1202830.4527965991 1178079.2935028854 1158104.4062555449 1208051.9372509504 1.0460041570378142 0.9560309904786294 0.9742048317332161 1.0062329540304877 1.093907945877403 1.0327159636516077 0.9956777649260401 0.9751892755403622 0.9586544837558338 1.0 20.204251050480256 SATRPS(ph)PS(ph)PERS(ph)STGPEPPAPTPLLAER ddPTM_KYSE-520_SHP099_60min_R1 2 SATRPSPSPERSSTGPEPPAPTPLLAER 28 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 SAT(0.001)RPS(0.998)PS(0.825)PERS(0.598)S(0.555)T(0.023)GPEPPAPTPLLAER;S(0.033)AT(0.035)RPS(0.925)PS(0.886)PERS(0.523)S(0.501)T(0.097)GPEPPAPTPLLAER 104.78 0.00094326 1550910000.0 351259.0 320244.0 317714.0 318312.0 275563.0 351250.0 321482.0 374388.0 392840.0 298575.0 True False 331773.96305254323 304858.99754395627 338194.3528003733 348564.2767760074 297248.2403610042 349057.71846042806 353980.5379219667 373089.33541081636 321510.1586905157 295929.8577878353 1.1211236525190578 1.030173162731429 1.142819299574831 1.177861130274688 1.004455050879368 1.1795285581175874 1.1961636469130816 1.2607356966268 1.0864404190030057 1.0 18.174895738759496 SATRPS(ph)PS(ph)PERSS(ph)TGPEPPAPTPLLAER ddPTM_KYSE-520_SHP099_60min_R1 1 SATRPSPSPERSSTGPEPPAPTPLLAER 28 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.019)AT(0.027)RPS(0.955)PS(0.893)PERS(0.265)S(0.68)T(0.162)GPEPPAPTPLLAER 82.554 0.0021004 489230000.0 280290.0 273270.0 226810.0 259890.0 272080.0 265590.0 244720.0 284640.0 324520.0 249930.0 True False 264741.7549557376 260141.6990133672 241430.53550883112 284589.86746122234 293491.14807656384 263932.3542943918 269458.6858370411 283652.65027547564 265595.3484834695 247715.81464259757 1.0687317454386387 1.0501618533669221 0.9746270574495424 1.148856272546936 1.1847897095306998 1.0654642888876165 1.0877734480772412 1.1450728355181015 1.0721776034633412 1.0 17.918326450320784 -5.2698153669763945 24.968737058485424 1.1081459472009265 1.0330723808862419 0.25016770739141825 0.05394508598847924 766.2843775176187 2284284.3305134685 0.015010658945051535 0.022669699257112052 5.3726015498001e-06 5.2698153669763945 -0.07507356631468465 SATRPS(ph)PS(ph)PERSST(ph)GPEPPAPTPLLAER ddPTM_KYSE-520_SHP099_60min_R1 1 SATRPSPSPERSSTGPEPPAPTPLLAER 28 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.005)AT(0.027)RPS(0.691)PS(0.957)PERS(0.361)S(0.546)T(0.413)GPEPPAPTPLLAER 74.846 0.012435 382620000.0 214980.0 212820.0 203610.0 211400.0 210390.0 176200.0 178890.0 224200.0 233920.0 176250.0 True False 203054.63084799462 202595.8077506672 216735.02638751882 231491.39244027264 226946.49604464966 175100.27044192856 196973.94699815437 223422.30252867332 191446.02464332944 174688.56212042522 1.1623808014861021 1.1597542809414365 1.2406938597279653 1.3251662823848147 1.2991491445684882 1.0023568132710343 1.1275720894786818 1.2789749930774086 1.0959276458601344 1.0 17.414425624120508 -6.2431329588522715 24.833932030451667 1.1200650928973495 1.2381693048409743 0.3663960865618874 0.08794794553164666 1040.1570551988507 1411046.4082590588 0.030898079051019735 0.030843051796757802 5.713037057968556e-07 6.2431329588522715 0.11810421194362486 SATRPS(ph)PSPER ddPTM_KYSE-520_SHP099_60min_R1 1 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.001)AT(0.034)RPS(0.641)PS(0.324)PER 77.74 0.021396000000000002 438390000.0 234170.0 216980.0 190610.0 202660.0 213200.0 224850.0 198240.0 212710.0 233030.0 221330.0 True False 221180.12329367816 206555.9551063803 202897.02558678304 221920.745468049 229977.62705793642 223446.6277461272 218280.03383595552 211972.1586568874 190717.62620825492 219369.18839213438 1.008255192603925 0.9415905516190828 0.9249112287551229 1.0116313375393156 1.0483588362775855 1.0185871105412678 0.9950350613768423 0.9662804526494195 0.8693911282897978 1.0 17.743001379961555 -7.529896782237584 24.98751805783569 0.9290756230278843 0.9911250939475612 0.2080660678800007 0.044932783973926325 272.5157840002227 970254.6766633791 0.03156346774397392 0.011986290267033874 2.9519107170771416e-08 7.529896782237584 0.06204947091967694 SATRPSPS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 2 SATRPSPSPER 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SATRPS(0.002)PS(0.998)PER;SATRPS(0.011)PS(0.988)PER 84.759 0.0025965999999999997 2244279000.0 470106.0 425397.0 391672.0 469807.0 421573.0 436549.0 472995.0 464148.0 531448.0 449969.0 True False 444028.28304692253 404960.28958608484 416919.8038173573 514457.31602737546 454748.3966777461 433824.3357613702 520809.9505863484 462537.97892095795 434950.4399138508 445982.62473058444 0.9956178972558796 0.9080180866479249 0.9348341856798035 1.1535366794573134 1.0196549629090528 0.9727382003355871 1.1677808096245157 1.037121074392471 0.9752631959072439 1.0 18.766627978969574 -5.208352554731127 24.993800663781307 1.0489825740782146 0.9423427468923244 0.3252519970251231 0.0661553037614045 369.3014733920913 173870.13477833368 0.017867948566922538 0.030948159402081687 6.189384247487081e-06 5.208352554731127 -0.10663982718589016 SATTT(ph)PSGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 SATTTPSGSPR 11 0 A0A096LP25;A0A096LNZ0;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LP25;Q2M2I8 AAK1 AP2-associated protein kinase 1 2 S(0.163)AT(0.004)T(0.034)T(0.793)PS(0.007)GS(1)PR;SATT(0.001)T(0.955)PS(0.044)GS(1)PR;SAT(0.001)T(0.062)T(0.921)PS(0.016)GS(1)PR 124.38 0.00045391 2044700000.0 1360020.0 1272480.0 1140370.0 1055390.0 1170130.0 1102980.0 1125420.0 1071510.0 1402990.0 1114330.0 True False 1284576.9794673438 1211348.1507685813 1213880.0748565122 1155693.9482854255 1262212.5738710288 1096095.8926903422 1239188.436640745 1067793.1819023145 1148242.3824997626 1104457.9031356212 1.1630836954675718 1.096780734991793 1.0990731936547649 1.0463902200385746 1.142834480415716 0.9924288554398145 1.121987930117224 0.9668029708246794 1.0396434117043616 1.0 20.074907000154173 -1.0000000000125493 0.16201588192155908 0.9797468925670336 1.635006207965012 0.45384173520059823 0.04742708365306579 55.50014920553634 0.5793229319957359 0.12967216442380408 8.708525238857764 0.09999999999711041 1.0000000000125493 0.6552593153979784 SATTTPSGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 SATTTPSGSPR 11 0 A0A096LP25;A0A096LNZ0;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LP25;Q2M2I8 AAK1 AP2-associated protein kinase 1 1 SATTT(0.001)PSGS(0.999)PR;SATTTPSGS(1)PR;SATTTPSGS(1)PR;SATTTPS(0.003)GS(0.997)PR;SATTTPSGS(1)PR;SATTTPS(0.011)GS(0.988)PR;SATTTPSGS(1)PR 217.62 9.3223e-10 3288750000.0 3118198.0 2821170.0 2424596.0 2097132.0 2602513.0 2704306.0 2549510.0 2550682.0 3373430.0 2895427.0 True False 2945225.3409663937 2685636.7585374997 2580889.337650762 2296442.7947542747 2807315.966826601 2687427.4231426255 2807239.351619786 2541834.279475655 2760900.1492499444 2869775.7693881174 1.026291103431528 0.9358350527540069 0.8993348418301856 0.8002168041316738 0.9782353021348306 0.9364590264540523 0.9782086048549832 0.885725744355844 0.9620612797349714 1.0 21.45250658530887 SAVAVYSYSCEGPEEES(ph)EDDSHLEGR ddPTM_KYSE-520_SHP099_60min_R1 2 SAVAVYSYSCEGPEEESEDDSHLEGR 26 0 A0A1B0GTI3;A0A1B0GTY1;A0A1B0GUC3;A0A1B0GV98;A0A1B0GTC5;A0A1B0GU26;A0A1B0GTC3;A0A1B0GVH5;Q9C0B1 A0A1B0GTI3 FTO Alpha-ketoglutarate-dependent dioxygenase FTO 1 SAVAVYSYSCEGPEEES(1)EDDSHLEGR;SAVAVYSYSCEGPEEES(1)EDDSHLEGR 271.13 1.5941999999999997e-38 1157990000.0 319880.0 288620.0 250560.0 346520.0 287920.0 312910.0 302010.0 274190.0 287510.0 291910.0 True False 302135.6187350292 274754.26197254803 266711.49851017486 379453.1566149627 310577.665959292 310957.0126219292 332540.1181335597 273238.89888642734 235305.43153729333 289323.9045025435 1.0442815613680931 0.9496424515801895 0.921843976109586 1.3115167834727837 1.0734600948141209 1.0747712435188552 1.1493696613327582 0.9444048508754493 0.8132941242510596 1.0 18.14232600089322 -7.435426023277951 5.764295071745417 0.8977300376375857 1.0726943662029989 0.30175567714298657 0.1092416771966316 0.27435821514236564 14.12124002197072 0.06483890395489714 0.03001062744512274 3.669221897994756e-08 7.435426023277951 0.1749643285654131 SAVAVYSYSCEGPEEES(ph)EDDSHLEGRDPDIWHVGFK ddPTM_KYSE-520_SHP099_60min_R1 5 SAVAVYSYSCEGPEEESEDDSHLEGRDPDIWHVGFK 36 1 A0A1B0GTI3;A0A1B0GTY1;A0A1B0GUC3;A0A1B0GV98;A0A1B0GTC5;A0A1B0GU26;A0A1B0GTC3;A0A1B0GVH5;Q9C0B1 A0A1B0GTI3 FTO Alpha-ketoglutarate-dependent dioxygenase FTO 1 SAVAVYSYSCEGPEEES(0.996)EDDS(0.004)HLEGRDPDIWHVGFK;SAVAVYSYSCEGPEEES(0.816)EDDS(0.184)HLEGRDPDIWHVGFK;SAVAVYSYSCEGPEEES(1)EDDSHLEGRDPDIWHVGFK;SAVAVYSYSCEGPEEES(0.84)EDDS(0.16)HLEGRDPDIWHVGFK;SAVAVYSYSCEGPEEES(0.99)EDDS(0.01)HLEGRDPDIWHVGFK 280.78 3.3958e-43 2369700000.0 598976.0 780158.0 648382.0 588690.0 537153.0 540113.0 514885.0 620509.0 805528.0 509185.0 True False 565749.6072509468 742678.0386389671 690177.7411678802 644638.9206038981 579423.8851175043 536741.9544222549 566934.600593351 618356.5991068891 659264.4209083946 504674.0170399361 1.1210198824366613 1.4715995148610894 1.3675713784830432 1.2773372490719812 1.1481151506788452 1.0635418830761427 1.1233679195901383 1.2252594312933631 1.3063173427773782 1.0 18.944992286350388 -5.646039846599063 3.659655941589416 1.1503420842913636 1.3337569482148424 0.3416298429337621 0.11246246264092832 0.2637862383434172 6.749597212957033 0.0346544270632604 0.045551799711533954 2.259228476080828e-06 5.646039846599063 0.18341486392347872 SAVCIADPLPTPS(ph)QEK ddPTM_KYSE-520_SHP099_60min_R1 6 SAVCIADPLPTPSQEK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 SAVCIADPLPT(0.021)PS(0.979)QEK;SAVCIADPLPT(0.001)PS(0.999)QEK;SAVCIADPLPT(0.002)PS(0.998)QEK;SAVCIADPLPT(0.004)PS(0.996)QEK;SAVCIADPLPT(0.005)PS(0.995)QEK;SAVCIADPLPT(0.002)PS(0.998)QEK 249.69 1.8733e-23 1870230000.0 3918760.0 5212330.0 3735010.0 3196630.0 3457810.0 5093820.0 3629320.0 5063720.0 5154310.0 5255880.0 True False 3701378.570945611 4961921.8429331705 3975774.7208272987 3500436.754098144 3729919.974752361 5062027.5799234165 3996207.0843498255 5046155.137201138 4218417.233581393 5209316.9922127705 0.7105304930528658 0.9525091005885373 0.7632046056653009 0.6719569493142434 0.7160094078221945 0.9717257727818192 0.7671268786913176 0.9686788392306444 0.8097831711695335 1.0 22.312662798537726 -6.253960076569542 24.977096605396298 0.8929843571595958 0.7683501293531022 0.3379788845429308 0.09770367169029938 786.4253950574893 2626265.8355080006 0.032623865749534964 0.03202592062237344 5.572369717540157e-07 6.253960076569542 -0.12463422780649358 SAVRPAS(ph)LNLNR ddPTM_KYSE-520_SHP099_60min_R1 5 SAVRPASLNLNR 12 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.069)AVRPAS(0.931)LNLNR;S(0.003)AVRPAS(0.997)LNLNR;SAVRPAS(1)LNLNR;SAVRPAS(1)LNLNR;SAVRPAS(1)LNLNR 187.08 6.5006e-08 4960690000.0 3102900.0 2688590.0 2814990.0 2617150.0 2606840.0 2861540.0 2550340.0 2786870.0 3278050.0 3046800.0 True False 2930775.951522202 2559426.100744135 2996448.7595432485 2865883.149125158 2811983.4771093405 2843680.0674256315 2808153.2561198063 2777202.9984303466 2682838.752915809 3019807.7223745286 0.9705174040742173 0.8475460479754031 0.9922647516071279 0.9490283529944956 0.9311796430860928 0.9416758710682398 0.9299112772357921 0.9196621949978266 0.8884137665580393 1.0 21.52602526231565 -5.036418909568983 0.0033616740185045475 1.8588780653744439 4.6695490018582486e-08 0.043859691191982186 0.04269018606985356 207318.34020759445 143.21329674223543 38868.685915968985 40329.12576656968 9.195621572306892e-06 5.036418909568983 -1.858878018678954 SAYLPGQTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 SAYLPGQTSPK 11 0 H0YJ41;Q9P203-5;Q9P203 H0YJ41 BTBD7 BTB/POZ domain-containing protein 7 1 SAYLPGQT(0.14)S(0.859)PK;SAYLPGQT(0.042)S(0.958)PK;SAYLPGQT(0.244)S(0.756)PK;SAYLPGQT(0.147)S(0.853)PK 127.02 0.00017511 5352940000.0 14422000.0 14477300.0 11416000.0 9706200.0 11302400.0 12845400.0 10934700.0 13016400.0 15772300.0 12845700.0 True False 13621982.910455763 13781788.777129687 12151893.626245832 10628674.329724552 12191834.5781408 12765227.093840797 12040086.18838794 12971249.146450607 12908447.907327216 12731897.091803385 1.0699099130502243 1.0824615277484615 0.9544448512758597 0.8348068047586673 0.9575819290897137 1.0026178347026438 0.9456631719195387 1.018799402235297 1.0138668113833162 1.0 23.601944065463503 -4.760975043674745 24.999403763932715 0.9622432626290229 1.0761857584999772 0.43018922914478797 0.050592028468049756 11.344554950120116 610600.445631323 0.014277888232522273 0.03338479316458351 1.73390363203811e-05 4.760975043674745 0.11394249587095429 SAYQEAMDISK ddPTM_KYSE-520_SHP099_60min_R1 1 SAYQEAMDISK 11 0 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 106.26 0.0057357 576380000.0 239460.0 395480.0 217730.0 164000.0 312660.0 301910.0 209210.0 261650.0 347420.0 294120.0 False True 226176.67644832446 376480.5471724176 231765.22418031745 179586.51069160204 337264.56320794724 300025.6677021717 230358.9884928385 260742.39721956901 284337.2857454919 291514.3256218976 0.7758681360369304 1.2914649953111519 0.7950388842328235 0.6160469483222958 1.1569399290702065 1.0291969942201522 0.7902149851517785 0.8944411107869853 0.9753801468895409 1.0 18.153207256647622 -3.9853254176363135 18.423699490329618 0.941040759977132 0.4680568818395878 0.07368865291986848 0.1826729235770721 9443141.291533018 227668382.8441333 0.046034784341517074 120942087.751597 0.00010343668233116458 3.9853254176363135 -0.47298387813754417 SAYQEAMDISKK ddPTM_KYSE-520_SHP099_60min_R1 4 SAYQEAMDISKK 12 1 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 ;;; 133.47 0.00012193 4855540000.0 2816780.0 2741770.0 1673060.0 1427540.0 2545440.0 2392820.0 1613080.0 1956500.0 2302440.0 2136050.0 False True 2660527.5982882814 2610051.2537193303 1780908.124590646 1563212.9723944499 2745751.6464275527 2377885.522808486 1776145.868543699 1949713.358150533 1884374.9357891039 2117126.258821753 1.2566693116210028 1.2328273964973189 0.8411912691413016 0.738365492318076 1.2969239009654765 1.1231666098798727 0.8389418728064805 0.9209244607053382 0.8900626157449002 1.0 21.013675879077983 -4.743420155668856 23.773509671566543 0.9595375656354543 1.2447489648061953 0.3703817582007679 0.15043584639512209 157.26225314508616 207476.2507036015 0.04113496434706158 0.1082452178208001 1.805426631358814e-05 4.743420155668856 0.285211399170741 SAYQEYDS(ph)DS(ph)DVPEELKR ddPTM_KYSE-520_SHP099_60min_R1 6 SAYQEYDSDSDVPEELKR 18 1 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 2 S(0.147)AY(0.065)QEY(0.049)DS(0.75)DS(0.989)DVPEELKR;S(0.009)AY(0.022)QEY(0.019)DS(0.951)DS(0.999)DVPEELKR;SAYQEYDS(1)DS(1)DVPEELKR;S(0.001)AY(0.001)QEY(0.003)DS(0.996)DS(1)DVPEELKR;SAYQEYDS(1)DS(1)DVPEELKR;SAYQEY(0.001)DS(0.999)DS(1)DVPEELKR 122.34 3.8642e-05 5953830000.0 5051870.0 4412860.0 3880990.0 4315280.0 4393360.0 4480570.0 4146670.0 4528610.0 5308210.0 4156050.0 True False 4771632.700446828 4200859.581762095 4131164.8252035533 4725402.91376376 4739092.437201009 4452605.10064695 4565855.871199265 4512901.308895523 4344372.8730846755 4119230.6303579765 1.1583795928493947 1.0198165528296785 1.0028971902562638 1.1471566750689812 1.1504799955299332 1.0809312466828307 1.1084244318707823 1.095568982138622 1.05465638196304 1.0 21.97394347240799 -8.043058348020816 2.789144710648168 1.0001810341288935 1.093363413966736 0.2663409157532568 0.04938872454579798 0.4351520631831141 8.150273331200241 0.05010905100124754 0.013482755226459206 9.056109227352636e-09 8.043058348020816 0.09318237983784261 SAYQEYDS(ph)DSDVPEELKR ddPTM_KYSE-520_SHP099_60min_R1 7 SAYQEYDSDSDVPEELKR 18 1 Q96JG6;H0Y7Q2;Q96JG6-3 Q96JG6 CCDC132 Coiled-coil domain-containing protein 132 1 SAYQEYDS(0.998)DS(0.002)DVPEELKR;SAYQEY(0.001)DS(0.994)DS(0.004)DVPEELKR;SAYQEYDS(0.986)DS(0.014)DVPEELKR;SAYQEYDS(1)DSDVPEELKR;SAYQEYDS(1)DSDVPEELKR;SAYQEYDS(0.999)DS(0.001)DVPEELKR;SAYQEYDS(1)DSDVPEELKR 176.65 5.5958e-09 12707500000.0 7936140.0 7262870.0 6881230.0 7081840.0 7377940.0 7118870.0 6824070.0 7303260.0 8821650.0 6938150.0 True False 7495906.493897125 6913950.823409871 7324805.09615729 7754895.944367156 7958541.903263752 7074438.491719254 7513913.5921051735 7277926.695653703 7219860.735699488 6876683.388799021 1.09004676674612 1.0054193907882327 1.0651653830810628 1.1277087377613746 1.1573227169694769 1.028757337184135 1.0926653398561428 1.0583483758330712 1.0499044855634108 1.0 22.71328149294184 -9.566406510911559 8.178042500961062 0.999999999999792 1.075335378906547 0.21891564244930317 0.04251837436809594 0.0 0.0 0.043407615831136656 0.010527893315380671 2.7138978007764505e-10 9.566406510911559 0.0753353789067549 SCDEPLT(ph)PPPHS(ph)PTSMLQLIHDPVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 SCDEPLTPPPHSPTSMLQLIHDPVSPR 27 0 I3VM54;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 3 S(0.121)CDEPLT(0.846)PPPHS(0.348)PT(0.349)S(0.349)MLQLIHDPVS(0.986)PR;S(0.019)CDEPLT(0.98)PPPHS(0.767)PT(0.136)S(0.135)MLQLIHDPVS(0.962)PR;S(0.047)CDEPLT(0.952)PPPHS(0.638)PT(0.183)S(0.183)MLQLIHDPVS(0.996)PR;S(0.018)CDEPLT(0.853)PPPHS(0.832)PT(0.149)S(0.149)MLQLIHDPVS(0.999)PR;S(0.011)CDEPLT(0.978)PPPHS(0.817)PT(0.097)S(0.097)MLQLIHDPVS(1)PR;S(0.002)CDEPLT(0.997)PPPHS(0.899)PT(0.051)S(0.051)MLQLIHDPVS(1)PR;S(0.006)CDEPLT(0.994)PPPHS(0.976)PT(0.012)S(0.012)MLQLIHDPVS(1)PR;SCDEPLT(0.999)PPPHS(0.66)PT(0.17)S(0.17)MLQLIHDPVS(1)PR 110.68 0.00024819999999999996 1879869000.0 885589.0 1089161.0 1015880.0 1260669.0 936384.0 1037521.0 992430.0 1001470.0 1317033.0 1084608.0 True False 836463.6127920968 1036836.0706960093 1081365.250265471 1380482.6027260458 1010072.0935038408 1031045.4465901254 1092754.5095834197 997996.1343148549 1077893.0069001291 1074999.2169322555 0.7781062531181445 0.9644993729901004 1.0059218957864753 1.284170798436071 0.9396026318849809 0.9591127419910483 1.0165165633346531 0.9283691732937762 1.0026918996054077 1.0 20.035904178228805 -4.282838965033357 2.6403559883556404 1.0182725705220927 0.7364114843790787 0.36528315269449674 0.09445127990862454 0.5103632623513543 4.849176746749723 0.025734971445474646 0.3107087396777753 5.2138800422513834e-05 4.282838965033357 -0.2818610861430141 SCDEPLT(ph)PPPHS(ph)PTSMLQLIHDPVSPR ddPTM_KYSE-520_SHP099_60min_R1 2 SCDEPLTPPPHSPTSMLQLIHDPVSPR 27 0 I3VM54;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 2 SCDEPLT(0.999)PPPHS(0.782)PT(0.101)S(0.118)MLQLIHDPVSPR;S(0.001)CDEPLT(0.992)PPPHS(0.845)PT(0.084)S(0.077)MLQLIHDPVSPR 136.65 3.2447000000000005e-06 591140000.0 219910.0 267070.0 277740.0 400430.0 238690.0 267400.0 279630.0 319940.0 382740.0 314190.0 True False 207711.1539202832 254239.55631975728 295643.5647997119 438486.7468063305 257473.545039676 265731.0574130065 307897.72932580847 318830.20281455707 313244.0640902352 311406.5210361209 0.6670096478043573 0.8164233538650507 0.9493814189119676 1.4080846648534673 0.826808456621276 0.8533252821066764 0.9887324398389672 1.0238391982086177 1.0059007854042374 1.0 18.24843963005469 -4.625357519110758 2.8198697527576213 1.0107070954653516 0.6886354975918209 0.3607772228920981 0.14844107225958378 0.30959965218648494 4.674474123052174 0.04122548255996282 0.1565853546352853 2.369422351033192e-05 4.625357519110758 -0.3220715978735308 SCDEPLTPPPHS(ph)PT(ph)SMLQLIHDPVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SCDEPLTPPPHSPTSMLQLIHDPVSPR 27 0 I3VM54;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 3 S(0.001)CDEPLT(0.128)PPPHS(0.612)PT(0.654)S(0.606)MLQLIHDPVS(0.999)PR 57.832 0.038697 200660000.0 105530.0 123340.0 117180.0 154970.0 119050.0 117910.0 97090.0 131130.0 156260.0 120990.0 True False 99676.04053116044 117414.56126288573 124733.61029462909 169698.3022065706 128418.55769815817 117174.07995350612 106904.8047070869 130675.140635972 127887.12299404349 119918.12272879557 0.831200808209663 0.9791227430104802 1.0401564622281831 1.4151180684370526 1.0708853238854232 0.9771173638075096 0.891481639925774 1.0897030212147691 1.066453677591922 1.0 16.871690178186658 -4.432159811103582 2.4885667850979605 1.0740026299327508 0.8204234716848313 0.24473463223458147 0.12878593549700051 0.5808531802228701 5.700419029330937 0.03708146977266091 0.26386989777384506 3.696921159362953e-05 4.432159811103582 -0.25357915824791943 SCDEPLTPPPHS(ph)PTSMLQLIHDPVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 SCDEPLTPPPHSPTSMLQLIHDPVSPR 27 0 I3VM54;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 2 SCDEPLT(0.002)PPPHS(0.835)PT(0.078)S(0.086)MLQLIHDPVS(0.998)PR;SCDEPLT(0.002)PPPHS(0.974)PT(0.009)S(0.014)MLQLIHDPVS(1)PR;SCDEPLTPPPHS(0.932)PT(0.205)S(0.191)MLQLIHDPVS(0.673)PR;SCDEPLT(0.097)PPPHS(0.888)PT(0.007)S(0.009)MLQLIHDPVS(1)PR 165.55 2.8685e-10 471057000.0 282729.0 333519.0 305550.0 357698.0 278414.0 259166.0 229384.0 215123.0 296933.0 246244.0 True False 267045.4587637117 317496.24661777506 325246.24189728533 391693.5103741748 300323.59784103354 257548.44886125386 252572.37329210463 214376.78852308547 243017.4522717926 244062.4697349329 1.094168468645506 1.3008810693532513 1.3326352152812477 1.6048903823663607 1.2305193754992472 1.0552562593542856 1.034867726965207 0.8783685126021713 0.995718237776274 1.0 17.896890938789447 -6.272962768252291 2.707023617601293 0.9752343037649839 1.3372420824357225 0.6377421925384952 0.12259577825445754 0.18650360253746456 2.7243452723297477 0.048809161055792104 0.04490459641313001 5.333806198573464e-07 6.272962768252291 0.36200777867073863 SCDEPLTPPPHS(ph)PTSMLQLIHDPVSPR ddPTM_KYSE-520_SHP099_60min_R1 1 SCDEPLTPPPHSPTSMLQLIHDPVSPR 27 0 I3VM54;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 SCDEPLTPPPHS(0.941)PT(0.029)S(0.029)MLQLIHDPVSPR 149.98 6.7271e-07 819260000.0 205080.0 252770.0 238080.0 256630.0 158340.0 212360.0 170850.0 173530.0 207730.0 215550.0 True False 193703.8035831553 240626.549784495 253427.01774146841 281020.038041377 170800.45716863844 211034.58246905767 188121.18533531597 172928.06493220667 170011.46844715634 213640.39469536216 0.9066815470892796 1.1263157893319444 1.1862317428445097 1.3153881242453889 0.7994764164903796 0.9878028112145167 0.8805506355835234 0.8094352436429041 0.7957833474778122 1.0 17.70482492912548 -5.775893379245259 24.99999564792232 0.8748466795445046 1.1368856808144066 0.5410479238831567 0.11492140104068606 183.82830336132605 317952.8355506545 0.03666003614723831 0.04175178074943421 1.675354130611223e-06 5.775893379245259 0.262039001269902 SCDEPLTPPPHSPT(ph)S(ph)MLQLIHDPVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SCDEPLTPPPHSPTSMLQLIHDPVSPR 27 0 I3VM54;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-4;Q9Y2K7-5;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 3 S(0.001)CDEPLT(0.035)PPPHS(0.622)PT(0.672)S(0.672)MLQLIHDPVS(1)PR 58.49 0.036177999999999995 177580000.0 127430.0 165230.0 156510.0 231010.0 165200.0 170730.0 166490.0 167740.0 220420.0 183680.0 True False 120361.20387459277 157292.10278471388 166598.8850248541 252965.12094431085 178200.30014057763 169664.4107409223 183320.43398581631 167158.14909081045 180397.28433602373 182052.7381008775 0.6611337194384809 0.8639919642271819 0.9151133169584066 1.389515607307922 0.978838890310097 0.9319519855115241 1.0069633442383952 0.9181853062720002 0.9909067351465131 1.0 17.473996913735313 -4.5173697817101806 2.141368304436068 1.0237007625888452 0.6554057848033673 0.4319818777416876 0.12886817500269804 0.41158262714722454 3.0680400855633327 0.036821177971209956 0.23715667801895482 3.038296954371045e-05 4.5173697817101806 -0.36829497778547793 SCDS(ph)PLNLK ddPTM_KYSE-520_SHP099_60min_R1 2 SCDSPLNLK 9 0 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 1 S(0.019)CDS(0.981)PLNLK;SCDS(1)PLNLK 89.266 0.0065547 356080000.0 1041120.0 921860.0 785820.0 672120.0 872560.0 874050.0 756480.0 858590.0 1025140.0 763910.0 True False 983366.9981787334 877572.4618599298 836475.2145564555 735998.0827197531 941225.5078127248 868594.7297376142 832952.3809333306 855611.7516864121 839000.4176763961 757142.3517129873 1.2987874683722644 1.1590587422226177 1.1047793227574478 0.9720735883478232 1.243128859035901 1.1472013522588886 1.100126520526593 1.1300540113106128 1.108114498915838 1.0 19.53020504387262 -1.0000000793310435 0.01603722028526117 6.16614283689262e-07 2.5013290694527552 0.290134879060305 0.07819766963929328 7580.456238118598 9.403766622475452 577.3367573767787 927.703164873045 0.09999998173335385 1.0000000793310435 2.5013284528384716 SCET(ph)SSQDLGFSYYPAENLIEYK ddPTM_KYSE-520_SHP099_60min_R1 1 SCETSSQDLGFSYYPAENLIEYK 23 0 S5FZ81;Q8WUB8-2;Q8WUB8;Q8WUB8-3 S5FZ81 PHF10 PHD finger protein 10 1 S(0.401)CET(0.488)S(0.05)S(0.06)QDLGFSYYPAENLIEYK 169.42 2.2325e-10 83597000.0 90368.0 80708.0 57061.0 69078.0 61703.0 65115.0 71795.0 69750.0 90487.0 55040.0 True False 85355.1068958582 76830.66653482217 60739.24336082802 75643.15235094189 66558.6750579542 64708.59313181713 79052.73925167685 69508.05352977235 74056.84179164219 54552.38842047201 1.5646447271560118 1.4083831846671215 1.1134112569493704 1.3866148585082867 1.2200872772964888 1.1861734198155434 1.4491160064773723 1.2741523431389834 1.3575361947644935 1.0 15.735354741761723 -11.272790987217553 1.8084149603510578 3.1475498023153146e-05 1.321126491378368 0.3730834213119205 0.12754768316145254 1835244.3849802662 260655.27097541612 7478233.506288829 0.03409727842846383 5.335916351974646e-12 11.272790987217553 1.321095015880345 SCFES(ph)S(ph)PDPELK ddPTM_KYSE-520_SHP099_60min_R1 6 SCFESSPDPELK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.078)CFES(0.935)S(0.987)PDPELK;S(0.007)CFES(0.995)S(0.998)PDPELK;SCFES(1)S(1)PDPELK;SCFES(1)S(1)PDPELK;SCFES(1)S(1)PDPELK;SCFES(1)S(1)PDPELK 253.97 4.6432e-16 3965640000.0 11518800.0 11049800.0 9886000.0 10443100.0 10837400.0 10809200.0 10001200.0 10791100.0 12409500.0 10459900.0 True False 10879829.20184149 10518951.021912051 10523267.37815927 11435609.084167488 11690241.723628888 10741735.773330849 11012218.898305887 10753668.192761667 10156247.61803777 10367233.423679072 1.0494438349378372 1.0146343380179375 1.0150506840256737 1.1030531113583508 1.127614402597324 1.0361236536640914 1.0622138470571763 1.0372746279831961 0.9796487841047926 1.0 23.305527615407115 -7.61479145241004 3.8000047193787583 0.9901940997187265 1.0581530699732131 0.3887027067238784 0.03381235189922885 0.26694314825970983 7.164034355839221 0.02940976832554341 0.009827681497675827 2.42777562960605e-08 7.61479145241004 0.0679589702544866 SCFES(ph)SPDPELK ddPTM_KYSE-520_SHP099_60min_R1 1 SCFESSPDPELK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SCFES(0.588)S(0.411)PDPELK 111.63 0.0001763 15285000000.0 18723000.0 15539000.0 14897000.0 12119000.0 14708000.0 16895000.0 14894000.0 15640000.0 19017000.0 15873000.0 True False 17684397.866624814 14792483.11548549 15857284.456042748 13270786.116289776 15865435.922927454 16789552.03811797 16399630.871432198 15585748.490403444 15563992.179557942 15732377.569007142 1.1240766240865692 0.9402573165181817 1.0079394793627172 0.8435334111503456 1.008457612546907 1.0671973746163752 1.042412744005048 0.9906797889918078 0.9892968886164466 1.0 23.907233379962847 -5.98129688885235 24.999884782530437 1.0209727089711136 0.9717255427270639 0.0633838560162685 0.0684857948712576 591.7010977239561 790905.0706684792 0.021303531160502612 0.02415277846834863 1.0440062801599035e-06 5.98129688885235 -0.04924716624404968 SCFESS(ph)PDPELK ddPTM_KYSE-520_SHP099_60min_R1 11 SCFESSPDPELK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SCFES(0.207)S(0.793)PDPELK;SCFES(0.048)S(0.952)PDPELK;S(0.01)CFES(0.42)S(0.571)PDPELK;SCFES(0.017)S(0.983)PDPELK;SCFES(0.001)S(0.999)PDPELK;SCFES(0.196)S(0.804)PDPELK;SCFES(0.115)S(0.885)PDPELK;SCFES(0.112)S(0.888)PDPELK;SCFES(0.342)S(0.658)PDPELK;S(0.003)CFES(0.171)S(0.826)PDPELK;SCFES(0.001)S(0.999)PDPELK 308.58 8.752799999999999e-45 87009230000.0 148916780.0 139216160.0 120682220.0 112610960.0 120820300.0 129593500.0 121984800.0 128777470.0 154706590.0 127777480.0 True False 140656069.35515893 132528006.7058837 128461588.99957928 123313471.78068024 130328170.23652926 128784658.89623195 134316214.0409213 128330771.01345757 126615773.091764 126645470.9365753 1.1106284995031541 1.046448844366921 1.014340173790451 0.9736903409868977 1.0290788077356376 1.0168911524734112 1.0605686334269906 1.0133072273680144 0.999765504091132 1.0 26.916220243775243 -4.34220151986331 2.3817420161871463 1.0150105628323123 1.123951267196588 0.6625056996039287 0.02115696804407586 0.29426043417482306 2.305899438045065 0.005899327368271903 0.06127777676230635 4.547769870967227e-05 4.34220151986331 0.10894070436427583 SCLQCRPPS(ph)PPESSVPQQQVK ddPTM_KYSE-520_SHP099_60min_R1 1 SCLQCRPPSPPESSVPQQQVK 21 1 P41002 P41002 CCNF Cyclin-F 1 S(0.022)CLQCRPPS(0.976)PPES(0.001)S(0.001)VPQQQVK 62.1 0.014787 666280000.0 55588.0 85366.0 51651.0 46585.0 48600.0 58905.0 55062.0 59710.0 49455.0 75564.0 True False 52504.42282806926 81264.88922302167 54980.50610452195 51012.424393709036 52424.54350382606 58537.35204529967 60628.20431333426 59502.87994641875 40475.218659096485 74894.56174790241 0.7010445298391744 1.0850572768762838 0.734105452003153 0.6811232111273787 0.6999779727704238 0.7815968299853112 0.8095141075450955 0.7944886592261188 0.5404293411227563 1.0 16.19257334490673 -4.881137641672502 19.843127957908322 0.7460466773197034 0.8973149650043185 0.13240079502594337 0.1395258965611184 3.244498335587922 539.2262326639575 0.03406542039204509 0.07091363326455354 1.3148080618459366e-05 4.881137641672502 0.1512682876846151 SCLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 SCLSPK 6 0 Q8NCF5;Q8IYA6-2;Q8IYA6-3;Q8IYA6 Q8NCF5 NFATC2IP;CKAP2L NFATC2-interacting protein;Cytoskeleton-associated protein 2-like 1 SCLS(1)PK;SCLS(1)PK;SCLS(1)PK;SCLS(1)PK;SCLS(1)PK 88.35799999999999 0.016002000000000002 3216810000.0 9858000.0 8611000.0 8177300.0 7459500.0 7659720.0 8198100.0 8048300.0 8239300.0 9461400.0 9065500.0 True False 9311157.088564198 8197314.634625499 8704421.842142597 8168448.637219538 8262496.386154877 8146932.616969208 8861900.707838587 8210719.791367069 7743448.262484585 8985186.722852279 1.0362786412532607 0.912314333298944 0.9687524712207033 0.9091017125380926 0.9195686902243931 0.9067071022852408 0.9862789701743054 0.9138062507353925 0.8618015964866322 1.0 23.09911705428743 -4.2557615033909055 24.581408564844487 0.9293502673128419 1.0362786998163442 0.38534875374027766 0.039872114532835 502.7952043444616 2176685.7351168953 0.00952467283580222 0.08163511418942301 5.549303741598764e-05 4.2557615033909055 0.10692843250350237 SCMLTGT(ph)PESVQSAK ddPTM_KYSE-520_SHP099_60min_R1 6 SCMLTGTPESVQSAK 15 0 E9PEB5;Q96AE4;Q96AE4-2;C9JSZ1 E9PEB5 FUBP1 Far upstream element-binding protein 1 1 SCMLTGT(0.999)PES(0.001)VQSAK;SCMLTGT(1)PESVQSAK;SCMLTGT(1)PESVQSAK;SCMLT(0.003)GT(0.997)PESVQSAK;SCMLTGT(0.999)PES(0.001)VQSAK;SCMLTGT(0.989)PES(0.01)VQSAK 361.77 8.087499999999997e-67 4298040000.0 5521930.0 6373050.0 4337900.0 4127960.0 4193130.0 5803540.0 4390130.0 5668320.0 6486100.0 6043710.0 True False 5215617.535205453 6066879.11185692 4617527.9748854 4520280.077283567 4523105.4753538715 5767317.954146138 4833927.1839398835 5648657.920915839 5308387.741275217 5990167.431335226 0.8706964529775884 1.0128062665027369 0.7708512371007533 0.7546166495509764 0.7550883221882928 0.9627974543710853 0.8069769734069665 0.9429883197199276 0.8861835336198545 1.0 22.514164897710717 -7.276637121220066 23.683845586625054 0.9359394714265175 0.8483715387562888 0.2072225895053018 0.08513178688572431 794.5656139863355 1238222.727531303 0.048787222741353206 0.023607172697541486 5.288869836244576e-08 7.276637121220066 -0.08756793267022867 SCS(ph)PLAFSAFGDLTIK ddPTM_KYSE-520_SHP099_60min_R1 2 SCSPLAFSAFGDLTIK 16 0 E9PLZ8;Q96EY5;Q96EY5-2 E9PLZ8 MVB12A Multivesicular body subunit 12A 1 S(0.009)CS(0.991)PLAFSAFGDLTIK;S(0.033)CS(0.967)PLAFSAFGDLTIK 145.86 1.1658e-05 262320000.0 489040.0 577210.0 459370.0 371830.0 422980.0 486170.0 400180.0 529540.0 704390.0 528900.0 True False 461911.9763229297 549479.9651901269 488981.72521798755 407168.61140523426 456266.11957301095 483135.63269439526 440634.0997804316 527703.1493355657 576490.5322268931 524214.3574779736 0.8811509447112735 1.0481970921851658 0.9327896465303004 0.7767215941283001 0.8703808147646591 0.9216375435018405 0.8405609146234536 1.0066552771930493 1.0997228977100575 1.0 18.999797341988327 -7.440792205997908 5.21168004630669 1.0514225211816906 0.8991152682322379 0.4636217200669681 0.06965643938357861 0.20242620850810053 9.311345951435419 0.04327706518528407 0.01965493473502547 3.6241635989332193e-08 7.440792205997908 -0.1523072529494527 SCS(ph)PSPVS(ph)PQVQPQAADTISDSVAVPASLLGMR ddPTM_KYSE-520_SHP099_60min_R1 3 SCSPSPVSPQVQPQAADTISDSVAVPASLLGMR 33 0 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 2 S(0.323)CS(0.388)PS(0.306)PVS(0.972)PQVQPQAADT(0.004)IS(0.005)DS(0.002)VAVPASLLGMR;S(0.393)CS(0.48)PS(0.286)PVS(0.841)PQVQPQAADTISDSVAVPASLLGMR;S(0.111)CS(0.662)PS(0.227)PVS(1)PQVQPQAADTISDSVAVPASLLGMR 193.84 1.2359000000000002e-15 1163066000.0 420840.0 393809.0 385904.0 390984.0 368638.0 407427.0 345421.0 354613.0 508407.0 412658.0 True False 397495.1662762584 374889.82452064 410779.9893082313 428143.0018063741 397647.7133366964 404884.0969656276 380339.5256640924 353382.93027029675 416093.10469750856 409002.17116306565 0.9718656630743912 0.9165961722271021 1.0043467205567884 1.0467988484972546 0.9722386367923648 0.9899314123792361 0.9299205541685359 0.8640123578449319 1.0173371537717726 1.0 18.641748976082745 -6.75689331722688 24.979980929913285 0.9414852105492311 0.9838778557228551 0.06709238514664218 0.04953235715260606 233.49066122377067 1283009.478334888 0.019688848833500583 0.014723340634566236 1.75027658454865e-07 6.75689331722688 0.042392645173624066 SCSPS(ph)PVS(ph)PQVQPQAADTISDSVAVPASLLGMR ddPTM_KYSE-520_SHP099_60min_R1 2 SCSPSPVSPQVQPQAADTISDSVAVPASLLGMR 33 0 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 2 S(0.302)CS(0.352)PS(0.406)PVS(0.939)PQVQPQAADT(0.001)ISDSVAVPASLLGMR;S(0.224)CS(0.249)PS(0.67)PVS(0.853)PQVQPQAADT(0.001)IS(0.001)DS(0.001)VAVPASLLGMR 81.208 0.0046854999999999996 536754000.0 51655.0 49269.0 43215.0 38565.0 42062.9 43815.0 34202.4 44794.0 51119.0 44279.4 True False 48789.59417831043 46902.043285723266 46000.708046444764 42230.20600500994 45373.01092483717 43541.53433265098 37659.912375256696 44638.620068998214 41837.078205122925 43887.11896485193 1.1117064717186098 1.0686972485773312 1.0481596680630951 0.9622460302949262 1.033857131546394 0.9921256022187805 0.8581085581265326 1.0171235005138557 0.953288326778278 1.0 15.421509944995442 -4.708899013780434 0.7360881077388229 0.9629869186455061 1.1533880947644997 0.5314812383953615 0.04568835480200808 1.3341946582610094 0.8308153605754481 0.020355109035713925 0.19055223557036458 1.954793949925206e-05 4.708899013780434 0.19040117611899354 SCSPSPVS(ph)PQVQPQAADTISDSVAVPASLLGMR ddPTM_KYSE-520_SHP099_60min_R1 2 SCSPSPVSPQVQPQAADTISDSVAVPASLLGMR 33 0 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.003)CS(0.004)PS(0.057)PVS(0.936)PQVQPQAADTISDSVAVPASLLGMR;S(0.048)CS(0.048)PS(0.145)PVS(0.726)PQVQPQAADT(0.011)IS(0.011)DS(0.011)VAVPASLLGMR 87.772 0.00044143 70631000.0 61860.0 66944.0 52575.0 57386.0 51178.0 72581.0 58995.0 61550.0 69510.0 65941.0 True False 58428.50248514726 63727.90975500736 55964.068622974286 62839.94818626997 55205.41743701255 72127.99505644506 64958.79033571527 61336.497415878024 56888.736204504996 65356.8140413217 0.8939925138977242 0.9750767489173436 0.8562851394131779 0.9614903833369165 0.8446773033047335 1.103603290864856 0.9939099891657084 0.9384866492589152 0.8704331298728427 1.0 15.9960500374698 SCSS(ph)PAVSAVSQLPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 SCSSPAVSAVSQLPLSPK 18 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 2 S(0.171)CS(0.342)S(0.487)PAVSAVSQLPLS(1)PK;S(0.182)CS(0.343)S(0.475)PAVSAVSQLPLS(1)PK;SCSS(1)PAVSAVSQLPLS(1)PK;S(0.005)CS(0.065)S(0.93)PAVSAVSQLPLS(1)PK 454.25 1.2008999999999996e-136 2632820000.0 3268370.0 3225130.0 2848660.0 3003120.0 3268900.0 3089910.0 3213160.0 2940340.0 3876480.0 3019880.0 True False 3087067.0007659327 3070189.913781179 3032289.18161715 3288535.6218790486 3526143.832503231 3070624.72554608 3537977.570219624 2930140.646820514 3172608.950108471 2993126.212631087 1.031385508482206 1.0257468932732876 1.013084302566592 1.0986959413877453 1.1780805692799698 1.0258921633801967 1.182034207341223 0.97895659543364 1.0599649746542466 1.0 21.513221684277077 -5.256808904737896 24.74817163102471 1.0806598706618298 1.0236396979208644 0.11574743480205218 0.06367578441073303 704.060723605057 3762921.7607593285 0.01724555273285549 0.028598912070416007 5.535936440890474e-06 5.256808904737896 -0.05702017274096538 SCT(ph)PS(ph)PDQISHR ddPTM_KYSE-520_SHP099_60min_R1 1 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 2 S(0.023)CT(0.977)PS(1)PDQISHR 143.05 0.0044388000000000006 0.0 478060.0 461850.0 493730.0 470290.0 453730.0 492080.0 440280.0 470420.0 620980.0 436810.0 True False 451541.0588110162 439662.0327490169 525556.6257959307 514986.22020215535 489435.9696294443 489008.74619219237 484787.799118717 468788.22281685285 508225.6856319031 432940.20323303784 1.0429640293026012 1.0155259998165633 1.2139242830101422 1.1895088891177767 1.130493232031853 1.1295064365481775 1.1197569444891013 1.082801318325522 1.1738934888390153 1.0 18.723808251221392 -9.650698161850563 13.95187620777662 1.000011146797196 1.12284238145891 0.27707506990119635 0.05912669484884659 0.0 0.0 0.06090838229842535 0.014772452570700517 2.2351251130192808e-10 9.650698161850563 0.12283123466171397 SCTKPS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 7 SCTKPSPSK 9 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 SCTKPS(0.992)PS(0.008)K;SCT(0.003)KPS(0.97)PS(0.027)K;SCT(0.006)KPS(0.954)PS(0.04)K;SCT(0.002)KPS(0.991)PS(0.007)K;SCTKPS(1)PSK;SCT(0.002)KPS(0.795)PS(0.203)K;SCT(0.001)KPS(0.969)PS(0.03)K 176.32 7.486e-05 35440330000.0 19013900.0 16639740.0 15287880.0 14477560.0 14640170.0 16505990.0 15987570.0 16023080.0 18539420.0 16613230.0 True False 17959161.063730057 15840341.913641067 16273361.20627286 15853502.949562859 15792268.087827353 16402969.9938239 17603749.599246904 15967499.675295 15173128.668745873 16466049.707097353 1.0906781761984556 0.9620001272565947 0.9882978307334126 0.9627994103971113 0.9590805547623495 0.9961691046489273 1.0690936753129785 0.9697225478684507 0.9214795860968286 1.0 23.97299115057244 -4.254786242136528 24.626922071714507 0.9822216131955654 1.0906782372962573 0.44930054962629273 0.036416671701222834 635.156741281489 2350987.8155600135 0.009535740947088445 0.08969532485318878 5.561779382855141e-05 4.254786242136528 0.1084566241006919 SCTKPS(ph)PSKK ddPTM_KYSE-520_SHP099_60min_R1 2 SCTKPSPSKK 10 2 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.002)CT(0.025)KPS(0.733)PS(0.24)KK;SCT(0.001)KPS(0.716)PS(0.282)KK 72.898 0.015211 11456800000.0 7592300.0 6766300.0 5860200.0 6699400.0 6806500.0 7235400.0 6473400.0 6658800.0 7570800.0 8530600.0 True False 7171139.984125186 6441236.791576644 6237957.868651522 7336108.961751936 7342132.826312591 7190241.18476464 7127794.446295769 6635702.176975604 6196133.564337023 8455025.520706372 0.8481511932238467 0.7618234594090868 0.737781081012086 0.867662545049189 0.8683750047036163 0.8504103467406132 0.843024592751351 0.7848234355679659 0.732834401169184 1.0 23.0113776786065 -11.284405234906057 2.4512652848191165 1.9375124552401208 0.8117223130665685 0.5631818554405346 0.050046530692243345 8402839.185303936 1048971.7498166002 44902811.82589034 0.01343916103206226 5.19511020882733e-12 11.284405234906057 -1.1257901421735523 SCTKPSPS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 4 SCTKPSPSK 9 1 Q9NQW6;Q9NQW6-2;C9JJT6 Q9NQW6 ANLN Actin-binding protein anillin 1 SCTKPS(0.002)PS(0.998)K;SCTKPS(0.173)PS(0.827)K;SCT(0.01)KPS(0.239)PS(0.75)K;SCTKPS(0.218)PS(0.782)K 188.27 7.358e-07 104648000000.0 27290600.0 23744700.0 20583500.0 20258300.0 20284900.0 22500000.0 22004000.0 21682900.0 25378300.0 21701100.0 True False 25776736.015537646 22603968.970478673 21910345.344764438 22183642.741120014 21881206.22470703 22359569.15404876 24228379.058345247 21607687.08072693 20770240.454881188 21508845.137200337 1.1984249201253412 1.0509150457076042 1.0186667487260714 1.0313730281479683 1.0173119981631502 1.0395522870438574 1.1264379330362733 1.00459540913964 0.9656604212077521 1.0 24.358426729206723 -4.2631353457384416 3.497348337191361 1.0297458026841175 1.2186395673772314 0.6327971679853148 0.03919345772048633 0.1994126131374952 4.276532639882543 0.010395274821695109 0.09957534034138747 5.455878048391082e-05 4.2631353457384416 0.18889376469311392 SCTPS(ph)PDQISHR ddPTM_KYSE-520_SHP099_60min_R1 1 SCTPSPDQISHR 12 0 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SCTPS(1)PDQISHR 274.39 5.351599999999999e-22 448120000.0 459670.0 443030.0 412230.0 441760.0 423450.0 414750.0 447180.0 435820.0 513150.0 483470.0 True False 434171.18877057295 421746.17379841226 438803.0053913203 483744.73758001305 456773.10589907755 412161.39140629873 492385.31845622737 434308.24214115215 419974.8954588079 479186.8319339684 0.9060582633673069 0.8801288885511958 0.9157242564874717 1.009511750620628 0.9532254967348948 0.8601267062010883 1.0275435083827131 0.9063442757563077 0.8764324632290399 1.0 18.870228737812706 -5.005591211411791 24.46533368480715 0.9450780227098794 0.894301804653261 0.15048604726699988 0.05272892430213404 371.8457923990857 1627115.5047422703 0.013884290845252173 0.027543943726992974 9.872082784791407e-06 5.005591211411791 -0.05077621805661836 SCTPSPDQISHRAS(ph)LEDAPVDDLTR ddPTM_KYSE-520_SHP099_60min_R1 3 SCTPSPDQISHRASLEDAPVDDLTR 25 1 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 SCTPSPDQIS(0.072)HRAS(0.928)LEDAPVDDLTR;SCTPSPDQISHRAS(1)LEDAPVDDLTR;SCTPSPDQISHRAS(1)LEDAPVDDLTR 267.97 4.5981e-38 1987450000.0 816656.0 901650.0 874260.0 721290.0 660453.0 706491.0 619213.0 648821.0 1136140.0 769081.0 True False 771354.4637166255 858333.380595759 930616.1984654595 789841.1847362545 712426.8936364696 702081.5276094708 681809.0929765111 646570.3913869595 929845.6157586883 762267.5406759643 1.0119209103835158 1.1260264077814535 1.2208524550844797 1.036173184071092 0.9346152835062386 0.9210434527841475 0.8944485454173948 0.8482197612843296 1.2198415466230124 1.0 19.53993791816979 -5.527349674766552 5.3485391359974495 0.9574577916328079 1.1222149148084086 0.2856867055706135 0.10508162139304553 0.19737603251908575 18.171163283012817 0.030764581081440645 0.04218144997266919 2.9692743402567693e-06 5.527349674766552 0.16475712317560076 SCVEEPEPEPEAAEGDGDKKGNAEGS(ph)S(ph)DEEGKLVIDEPAK ddPTM_KYSE-520_SHP099_60min_R1 3 SCVEEPEPEPEAAEGDGDKKGNAEGSSDEEGKLVIDEPAK 40 3 P51858;P51858-2;P51858-3 P51858 HDGF Hepatoma-derived growth factor 2 SCVEEPEPEPEAAEGDGDKKGNAEGS(1)S(1)DEEGKLVIDEPAK;SCVEEPEPEPEAAEGDGDKKGNAEGS(1)S(1)DEEGKLVIDEPAK;SCVEEPEPEPEAAEGDGDKKGNAEGS(1)S(1)DEEGKLVIDEPAK 93.391 0.00066086 3145070000.0 564630.0 638644.0 589087.0 417159.0 417003.0 405596.0 472169.0 340442.0 683415.0 400953.0 True False 533308.8483379997 607962.5836158129 627060.490592526 456805.66593657335 449818.76367748925 403064.52491580247 519900.4504453656 339261.08616176026 559324.0634901718 397400.86835671414 1.3419921565427786 1.5298471443451775 1.5779041781802683 1.1494833109587883 1.1319018137467276 1.0142517468130052 1.30825192354309 0.8536999115392808 1.407455564460701 1.0 18.60023549944653 -5.30187851695812 7.743081365469181 1.1202711829366494 1.4877361702696204 0.5240452884764204 0.15705299663765426 0.19458006351974597 33.627981686401554 0.041091365576457435 0.06164094533272678 4.9902405746356534e-06 5.30187851695812 0.36746498733297095 SCVPLNTNELNS(ph)NENIHYK ddPTM_KYSE-520_SHP099_60min_R1 1 SCVPLNTNELNSNENIHYK 19 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 SCVPLNTNELNS(1)NENIHYK 82.885 0.0020486000000000002 682710000.0 338010.0 331790.0 305280.0 328560.0 283070.0 305960.0 322780.0 323110.0 351630.0 300310.0 True False 319259.91149377037 315850.310373057 324958.83726527035 359786.2436148339 305345.9985520173 304050.3901499003 355409.75242922583 321989.2068244411 287782.8558709552 297649.4870376447 1.0726036005343174 1.0611485123544335 1.0917500328974923 1.2087581510574905 1.0258576340613657 1.0215048350190707 1.1940546444962492 1.0817730950220588 0.9668515095897288 1.0 18.183254882497163 -7.713529008254265 6.217493815371309 0.9834603803781361 1.0963950896248353 0.360482260925331 0.05937246379894491 0.1930500893021442 17.09435405421233 0.04389494849042854 0.015531760664946955 1.9340646704398195e-08 7.713529008254265 0.11293470924669924 SCVS(ph)AENFLQIQDFEGLQNRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SCVSAENFLQIQDFEGLQNRPR 22 1 O60285 O60285 NUAK1 NUAK family SNF1-like kinase 1 1 SCVS(1)AENFLQIQDFEGLQNRPR 220.49 8.986e-20 216550000.0 7232.5 8280.9 10224.0 6501.9 5841.5 9314.9 10095.0 7092.2 10152.0 3880.7 True False 6831.2988073686965 7883.0731341156925 10883.055398978395 7119.838621132487 6301.192816411519 9256.762253913284 11115.50111770567 7067.598813531923 8308.652711093875 3846.320017138912 1.776060956168219 2.0495104668850517 2.8294721579287008 1.8510780666733455 1.6382393530267576 2.4066542078313424 2.889905433810976 1.8374963034898903 2.1601563765030325 1.0 11.909263085803858 SDADSGFLGLRPT(ph)SVDPALR ddPTM_KYSE-520_SHP099_60min_R1 1 SDADSGFLGLRPTSVDPALR 20 1 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 SDADSGFLGLRPT(0.609)S(0.391)VDPALR 109.91 0.00028463 690440000.0 701240.0 706890.0 671890.0 573830.0 614840.0 654470.0 626810.0 720250.0 801100.0 732450.0 True False 662340.8193127172 672929.9433364779 715201.1044620102 628366.6306717197 663224.4100389389 650385.2099666808 690174.0718760857 717751.6208576144 655640.4340875986 725961.0628374777 0.9123641104440291 0.9269504630265935 0.9851783257721685 0.8655651974166463 0.9135812428378356 0.8958954457207354 0.9507039801535422 0.988691622181807 0.9031344346830046 1.0 19.46953264530561 -8.542929452350487 0.49282601674214344 1.0029995563928398 0.9198049255573677 0.2676770216052772 0.036575739010797755 2.930368353035948 1.27091408765381 0.06643792382280693 0.02024445267966559 2.8646432703984554e-09 8.542929452350487 -0.08319463083547207 SDADSGFLGLRPT(ph)SVDPALRR ddPTM_KYSE-520_SHP099_60min_R1 4 SDADSGFLGLRPTSVDPALRR 21 2 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 SDADSGFLGLRPT(0.5)S(0.5)VDPALRR;SDADSGFLGLRPT(0.5)S(0.5)VDPALRR;SDADSGFLGLRPT(0.618)S(0.382)VDPALRR;SDADSGFLGLRPT(0.5)S(0.5)VDPALRR 179.2 7.8615e-10 1199820000.0 1693150.0 1761070.0 1870540.0 1419810.0 1619280.0 1540440.0 1438860.0 1409750.0 1980960.0 1571760.0 True False 1599227.594289155 1676465.5537800367 1991118.001369819 1554748.315518559 1746708.1235571066 1530825.5425627944 1584314.0107203547 1404859.9062881218 1621267.5999377987 1557835.429210776 1.026570306658996 1.0761506140795376 1.2781311581663994 0.9980183313112984 1.1212404666146387 0.9826619127145765 1.0169970338413687 0.9018025138893175 1.040718146177455 1.0 20.57111140349273 -6.258680054384011 1.7330457285221785 0.9785974778025187 1.1088787612062316 0.31739872053812446 0.07876787491754993 0.42077778707561136 2.4974963595153983 0.032975665608067126 0.030136442003396872 5.512136270468348e-07 6.258680054384011 0.13028128340371292 SDADSGFLGLRPTS(ph)VDPALR ddPTM_KYSE-520_SHP099_60min_R1 5 SDADSGFLGLRPTSVDPALR 20 1 Q9NZM5 Q9NZM5 GLTSCR2 Glioma tumor suppressor candidate region gene 2 protein 1 SDADSGFLGLRPT(0.207)S(0.793)VDPALR;SDADSGFLGLRPT(0.287)S(0.713)VDPALR;SDADSGFLGLRPT(0.117)S(0.883)VDPALR;SDADSGFLGLRPT(0.248)S(0.752)VDPALR;SDADSGFLGLRPT(0.176)S(0.824)VDPALR 169.41 3.7588e-09 2390540000.0 2983420.0 2915940.0 2714860.0 2433700.0 2577630.0 2751110.0 2542210.0 2840010.0 3348480.0 2992310.0 True False 2817923.7452996746 2775853.8654848253 2889864.2195295827 2664998.1162814125 2780474.816291502 2733939.3020175635 2799201.396378657 2830158.668173317 2740480.4403116247 2965800.461381953 0.9501393576513999 0.9359543575603128 0.9743960381552483 0.8985763374787602 0.9375124363545024 0.9218217265849534 0.9438266103291159 0.9542646934698256 0.9240272486284065 1.0 21.49999010607203 -10.821422887313604 2.482780677556064 1.022374718959338 0.9378796647085925 0.4788028359845894 0.019457443727901372 8526260.401306 5571813.260340217 1141992.4725230508 0.005088364776007598 1.5086104534035306e-11 10.821422887313604 -0.08449505425074544 SDAEEDGGTVS(ph)QEEEDR ddPTM_KYSE-520_SHP099_60min_R1 1 SDAEEDGGTVSQEEEDR 17 0 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 SDAEEDGGT(0.048)VS(0.952)QEEEDR 247.36 9.722799999999999e-28 252000000.0 211160.0 238560.0 174850.0 256680.0 221610.0 258410.0 277360.0 358010.0 317350.0 232120.0 True False 199446.53386297583 227099.21951413996 186121.1107698916 281074.79002634395 239049.446211582 256797.16733767773 305398.2555727431 356768.14687016257 259727.23974247833 230063.59738662717 0.8669191307471444 0.9871149634007265 0.808998524252017 1.2217264844120093 1.0390581079624426 1.116200782108628 1.3274514483902218 1.5507370610684033 1.1289367057318536 1.0 17.81167320061298 -5.731415411358116 0.9107405163614951 1.2777076645413865 0.8858637842526177 0.3963300954105402 0.16224529532833984 0.559635374277666 0.9965165746251557 0.07961768953513215 0.13345262570062053 1.8560282775831713e-06 5.731415411358116 -0.3918438802887688 SDAEEDGGTVS(ph)QEEEDRKPK ddPTM_KYSE-520_SHP099_60min_R1 8 SDAEEDGGTVSQEEEDRKPK 20 2 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 1 SDAEEDGGT(0.011)VS(0.989)QEEEDRKPK;SDAEEDGGT(0.023)VS(0.977)QEEEDRKPK;SDAEEDGGT(0.004)VS(0.996)QEEEDRKPK;SDAEEDGGT(0.019)VS(0.981)QEEEDRKPK;SDAEEDGGT(0.001)VS(0.999)QEEEDRKPK;SDAEEDGGTVS(1)QEEEDRKPK;SDAEEDGGTVS(1)QEEEDRKPK;SDAEEDGGTVS(1)QEEEDRKPK 334.6 4.8836e-65 20284120000.0 9194880.0 10330590.0 8283550.0 12896800.0 11160980.0 10752340.0 11900250.0 13931050.0 16415160.0 8911260.0 True False 8684821.676861152 9834292.949868275 8817520.887148606 14122507.994435705 12039285.628710559 10685230.65768199 13103243.405247826 13882726.439081497 13434580.736509021 8832313.169255365 0.983300921336483 1.113444775044971 0.9983252086035344 1.598959154165312 1.3630954199652283 1.2097884725007821 1.483557382324175 1.571810937072097 1.5210716014094487 1.0 23.074359896300045 -5.246972524253686 24.943781315612046 1.4113792138956045 1.0398657095095603 0.4739155134271884 0.1734095718362757 657.8524490482191 1134268.5676129176 0.04621085614495401 0.07957379559086106 5.662751134381771e-06 5.246972524253686 -0.37151350438604425 SDAGLES(ph)DTAMK ddPTM_KYSE-520_SHP099_60min_R1 4 SDAGLESDTAMK 12 0 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 SDAGLES(0.995)DT(0.005)AMK;SDAGLES(0.99)DT(0.01)AMK;SDAGLES(1)DTAMK;SDAGLES(1)DTAMK 252.2 7.1364e-16 3221170000.0 7385140.0 8047380.0 6787040.0 7068940.0 6803080.0 6813300.0 7272820.0 7772340.0 8568200.0 7087160.0 True False 6975471.562288403 7660771.785436366 7224543.458047947 7740769.932245687 7338443.691769741 6770775.667434696 8008027.62148313 7745379.566617788 7012430.866744929 7024373.2761270385 0.9930382808663041 1.0905986177403448 1.0284965183443773 1.1019872703168248 1.0447115213409996 0.9638974754439351 1.1400344638146052 1.1026435045730205 0.9982998612242466 1.0 22.743938081240227 -7.79363875713733 24.421824260303932 0.9991496661323179 1.058864959042002 0.1773079227285802 0.05084052744264193 303.9039041645768 230488.35631586038 0.04876616316895835 0.012596256999903802 1.6082784506417808e-08 7.79363875713733 0.05971529290968414 SDAGLES(ph)DTAMKK ddPTM_KYSE-520_SHP099_60min_R1 3 SDAGLESDTAMKK 13 1 Q9NR30 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 SDAGLES(0.996)DT(0.004)AMKK;SDAGLES(1)DTAMKK;SDAGLES(0.998)DT(0.002)AMKK 124.43 4.8868999999999996e-05 1642890000.0 1392930.0 1255780.0 1179320.0 1135040.0 1114880.0 1101060.0 1136870.0 1292100.0 1290650.0 1282430.0 True False 1315661.396162886 1195450.4438357898 1255340.8541787176 1242913.860337781 1202614.7132005263 1094187.8761225299 1251795.914381975 1287618.0066784073 1056300.494638821 1271068.6679154423 1.035082863241823 0.940508151928828 0.9876263067970055 0.97784949917471 0.9461445660310542 0.8608408843221683 0.9848373624337113 1.013020019437743 0.8310333826190195 1.0 20.277610541590764 -5.776174793069131 4.683416854319047 0.9378903978920494 0.9826924511902948 0.1315111827314741 0.057997742681316036 0.44197754782355486 24.15334068509286 0.017741297614061676 0.021375796439696015 1.674268887500438e-06 5.776174793069131 0.04480205329824538 SDALETLGFLNHYQMK ddPTM_KYSE-520_SHP099_60min_R1 2 SDALETLGFLNHYQMK 16 0 P14866;M0QXS5;P14866-2;A0A3B3ITJ4;M0R076;M0QYT0 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 ; 306.54 1.0048999999999998e-46 1661160000.0 2467600.0 2014400.0 1430870.0 1562030.0 2714100.0 2272850.0 1679580.0 1670490.0 1550060.0 1217920.0 False True 2330717.308961356 1917625.200323957 1523106.169672947 1710484.8615585559 2927684.2288834252 2258664.3000791003 1849368.3375211572 1664695.4600852963 1268608.1778327595 1207130.1763274213 1.9307920178520777 1.588581942469659 1.2617580104797417 1.416984592964566 2.425326022244449 1.8711025077269392 1.5320372017769321 1.379052145933402 1.0509290569575347 1.0 20.203149833333647 -7.475433636428548 1.7782152345697664 1.0056730248018564 1.7277466442256775 0.4684400950480413 0.30038682730991473 0.3792125206720523 2.142171994597463 0.2862906229496315 0.09600592691022669 3.346311481862872e-08 7.475433636428548 0.7220736194238211 SDATNYASHS(ph)PPVNR ddPTM_KYSE-520_SHP099_60min_R1 1 SDATNYASHSPPVNR 15 0 Q96FJ0;Q96FJ0-2 Q96FJ0 STAMBPL1 AMSH-like protease 1 SDATNYASHS(1)PPVNR 124.43 0.0028786 0.0 238240.0 245570.0 303310.0 329900.0 243500.0 220330.0 230780.0 258100.0 269320.0 231930.0 True False 225024.3522803343 233772.44859191534 322861.84791315906 361253.59681194805 262662.06467451964 218954.83874273603 254109.4945957518 257204.71134099257 220418.27700470865 229875.2806388096 0.9788975641704717 1.0169534016109767 1.4045087710864141 1.5715199816528598 1.1426285764376123 0.9524940573613382 1.1054233142841492 1.118888079771936 0.9588602845516033 1.0 17.810491810361558 -5.998644103766126 24.999688274443045 1.0403572687193219 1.2532031030001343 0.26695323480882593 0.16782955059133045 70.92394891295197 1307633.1785650174 0.057944210512123784 0.0652121088350911 1.0031269451811558e-06 5.998644103766126 0.21284583428081238 SDDKHMHDHNHR ddPTM_KYSE-520_SHP099_60min_R1 1 SDDKHMHDHNHR 12 1 Q9ULF5 Q9ULF5 SLC39A10 Zinc transporter ZIP10 0 121.28 0.00044530000000000004 37831000.0 17960.0 47356.0 38926.0 138830.0 35524.0 24011.0 44377.0 25117.0 62981.0 4815.2 False True 16963.72299762763 45080.94667719485 41435.23224380213 152024.3614592386 38319.53669608883 23861.138442571773 48863.06023778351 25029.874989351883 51545.23802180881 4772.541074168914 3.554442535747411 9.445900197945432 8.682006419613188 31.853966073138928 8.029168549955697 4.999671678410213 10.238373956015137 5.244559365832292 10.800375988547119 1.0 12.22054189868623 -7.9641753910598965 0.5543720757993653 1.3938289891215734 12.039624385543439 0.1302588852001172 7.522324706437113 1.9962510355925351 1.4934952759697617 8.637789161326557 4.003818377830922 1.085986956128078e-08 7.9641753910598965 10.645795396421866 SDDS(ph)KS(ph)SSPELVTHLK ddPTM_KYSE-520_SHP099_60min_R1 1 SDDSKSSSPELVTHLK 16 1 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 2 S(0.005)DDS(0.52)KS(0.52)S(0.516)S(0.432)PELVT(0.008)HLK 56.54 0.034789 1208400000.0 777150.0 753810.0 672030.0 667380.0 662270.0 701920.0 619700.0 630900.0 778800.0 638920.0 True False 734039.9402898827 717595.8361081217 715350.1290860181 730807.5945448861 714386.8811991537 697539.0569159966 682345.3236891736 628711.5551531672 637389.5519503461 633259.6658722378 1.1591452603867205 1.1331778649122097 1.1296315992282735 1.1540409628620323 1.1281105045829394 1.1015055821615005 1.0775126862837954 0.992817937152517 1.0065216313317853 1.0 19.27243766737659 -6.942457840144051 1.348689596180962 0.9933603568877276 1.1410957183486825 0.9566059870608483 0.012932195112574554 0.08011807375126367 0.2829968651738472 0.008831009369348674 0.004357346600607722 1.1416741291460268e-07 6.942457840144051 0.1477353614609549 SDDSKS(ph)S(ph)SPELVTHLK ddPTM_KYSE-520_SHP099_60min_R1 1 SDDSKSSSPELVTHLK 16 1 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 2 SDDS(0.108)KS(0.64)S(0.596)S(0.554)PELVT(0.103)HLK 83.84899999999999 0.002568 932380000.0 878220.0 808940.0 726890.0 689410.0 786170.0 792510.0 777910.0 823630.0 933710.0 707920.0 True False 829503.3859118327 770077.3081563059 773746.4924651209 754931.3191213253 848037.106304586 787563.6511233416 856548.7344699776 820773.0197666875 764171.8009136593 701648.3795534252 1.1822209101940528 1.0975259554457082 1.1027553330310311 1.0759396602637532 1.2086354519115858 1.1224477588398316 1.2207663545309417 1.1697782588610566 1.089109336217705 1.0 19.420388701317886 -8.044596338307116 4.229070843657208 1.000116491075394 1.1452508370836043 0.4964227399651193 0.04598109681574223 0.20265132939207364 10.734915465458215 0.046296269885506544 0.01213558843452036 9.024095063379848e-09 8.044596338307116 0.1451343460082104 SDDSKSS(ph)S(ph)PELVTHLK ddPTM_KYSE-520_SHP099_60min_R1 1 SDDSKSSSPELVTHLK 16 1 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 2 S(0.001)DDS(0.356)KS(0.534)S(0.573)S(0.535)PELVTHLK 69.737 0.013922 873300000.0 717100.0 741350.0 554000.0 580390.0 684950.0 667670.0 598700.0 654260.0 746530.0 723560.0 True False 677321.0334965901 705734.4332109634 589711.7264313402 635550.0910993842 738851.6681676053 663502.8238703889 659222.4387489235 651990.5247654316 610978.9704898449 717149.821321161 0.9444623889730646 0.9840822827102323 0.8222992028987062 0.8862166205780396 1.0302612455601876 0.9251941562894884 0.9192255497386564 0.9091413054587528 0.8519544345200784 1.0 19.451915021394218 SDDYMPMS(ph)PASVSAPK ddPTM_KYSE-520_SHP099_60min_R1 6 SDDYMPMSPASVSAPK 16 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SDDYMPMS(1)PASVSAPK;SDDYMPMS(0.999)PAS(0.001)VSAPK;SDDYMPMS(1)PASVSAPK;SDDYMPMS(1)PASVSAPK;SDDYMPMS(1)PASVSAPK;SDDYMPMS(1)PASVSAPK 334.51 1.6662e-58 3581780000.0 3527400.0 3720310.0 2816430.0 2661110.0 2916940.0 4799340.0 4036460.0 5491030.0 6084180.0 5611970.0 True False 3331728.0903024278 3541580.723300841 2997981.584247332 2914021.094308107 3146486.582881693 4769385.538835219 4444504.768853315 5471982.8985460345 4979446.281696528 5562252.311846599 0.5989890252203132 0.6367170212250008 0.5389869815617981 0.5238922887589557 0.5656856982521705 0.8574558059290629 0.7990476734374883 0.9837710682220749 0.8952212166088189 1.0 22.40723775823634 -6.407531387808872 1.994930022199408 0.9256929091927533 0.5675482664872061 0.8840598685484806 0.060571288897289605 0.10958569563823904 0.8621954093433505 0.026373008151319922 0.021874647632926993 3.9126284832568674e-07 6.407531387808872 -0.35814464270554713 SDEGQLS(ph)PATR ddPTM_KYSE-520_SHP099_60min_R1 6 SDEGQLSPATR 11 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 SDEGQLS(1)PATR;SDEGQLS(1)PATR;SDEGQLS(1)PATR;SDEGQLS(1)PATR;SDEGQLS(1)PATR;SDEGQLS(1)PATR 220.09 2.8983e-11 21356090000.0 7336580.0 6557630.0 6274860.0 5791660.0 6231150.0 6657690.0 6226290.0 6521510.0 7730190.0 6566180.0 True False 6929605.282290361 6242591.61159669 6679347.515730985 6342097.625073932 6721506.0546062905 6616136.887165293 6855704.155934577 6498888.403941877 6326582.3582319515 6508008.753610734 1.0647811864797692 0.9592168431139882 1.0263273711832657 0.9745066217919955 1.0328053186586612 1.0166146263239995 1.0534257736102364 0.9985985959739534 0.9721225950597985 1.0 22.63378476083589 -4.219045770070382 22.888339993637885 1.0063478644707733 1.064781750835157 0.2934412475456596 0.0281563982636089 13125.560990383094 7086043.449826567 0.006949125108456005 2.4125135711536787 6.038849828972096e-05 4.219045770070382 0.058433886364383625 SDEMNVK ddPTM_KYSE-520_SHP099_60min_R1 2 SDEMNVK 7 0 G8JLA2;P60660-2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;F8VPF3 G8JLA2 MYL6 Myosin light polypeptide 6 0 ; 119.21 0.019418 843640000.0 1111460.0 1267340.0 825220.0 759540.0 1141740.0 1257300.0 873090.0 1124390.0 1156280.0 1168400.0 False True 1049805.0981594208 1206455.0840838768 878415.0015986831 831726.4532359715 1231588.442388031 1249452.7243282448 961350.4577372601 1120489.7535245975 946328.6994467707 1158048.8850014445 0.9065291731256331 1.0417997890325432 0.7585301561752182 0.7182135953051187 1.0635029819026118 1.0789291717393141 0.830146697767479 0.9675668860241594 0.8171750879459552 1.0 20.143264724776166 SDES(ph)GEEKNGDEDCQR ddPTM_KYSE-520_SHP099_60min_R1 3 SDESGEEKNGDEDCQR 16 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBM7;E5RHK4 Q6PKG0 LARP1 La-related protein 1 1 SDES(1)GEEKNGDEDCQR;SDES(1)GEEKNGDEDCQR;SDES(1)GEEKNGDEDCQR 256.4 7.379999999999999e-25 1782140000.0 857210.0 805100.0 709370.0 741240.0 801320.0 722260.0 785720.0 837290.0 975880.0 707837.0 True False 809658.8524942304 766421.787520263 755097.1252321296 811687.2267380671 864379.3251128778 717752.107431256 865148.2454882318 834385.6364149542 798684.7919328505 701566.1148688527 1.1540734869237292 1.0924441350243008 1.076302160592924 1.1569646958929878 1.232071086093519 1.0230712290963897 1.2331670916716928 1.1893186097947877 1.1384312540267894 1.0 19.420219542784988 -5.282705436716393 23.439189922436146 1.149862501201171 1.106090342306858 0.021127875474668767 0.07572749846954435 1032.7516004387146 1138283.8328276225 0.020542912052380725 0.03051774643028591 5.215483349900711e-06 5.282705436716393 -0.04377215889431296 SDES(ph)PKPGK ddPTM_KYSE-520_SHP099_60min_R1 11 SDESPKPGK 9 1 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.088)DES(0.912)PKPGK;S(0.001)DES(0.999)PKPGK;S(0.007)DES(0.993)PKPGK;SDES(1)PKPGK;S(0.001)DES(0.999)PKPGK;SDES(1)PKPGK;SDES(1)PKPGK;SDES(1)PKPGK;SDES(1)PKPGK;SDES(1)PKPGK;S(0.001)DES(0.999)PKPGK 155.98 0.00025610000000000005 30654730000.0 50579450.0 35493080.0 33357460.0 41217070.0 40046440.0 49020030.0 52377620.0 31419550.0 43699780.0 56465810.0 True False 47773707.080866195 33787939.16060082 35507735.245423056 45134327.940436 43197866.99492511 48714077.809713125 57672460.98591012 31310562.9144281 35765001.53380676 55965566.85313547 0.8536267881684053 0.6037272748307355 0.6344568141086154 0.8064660197023868 0.7718650846204188 0.8704294541954403 1.0304990055269854 0.5594611950700528 0.639053681483493 1.0 25.738036137649985 -5.279351257656576 22.481186927821508 0.8027324487051046 0.6879160021600096 0.10748757951970866 0.14822923182176093 511.58374454466707 642087.3329027838 0.04335151656140453 0.06452552126817038 5.255919952899354e-06 5.279351257656576 -0.11481644654509504 SDESIKEEDKDQDEKR ddPTM_KYSE-520_SHP099_60min_R1 1 SDESIKEEDKDQDEKR 16 3 K7ENQ6;P26358;P26358-2 K7ENQ6;P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 0 130.39 2.7486e-05 109480000.0 229600.0 317560.0 207810.0 168040.0 224600.0 254710.0 222180.0 300400.0 239980.0 239990.0 False True 216863.6303037471 302303.94093272183 221205.7651077561 184010.47107693172 242274.74220080944 253120.26041012254 244640.12266784016 299357.9825138869 196405.68140349758 237863.87530939482 0.9117131805814052 1.2709115267692852 0.9299678852874521 0.7735956997992454 1.018543660258109 1.0641391429483917 1.0284879212937708 1.2585264665536342 0.8257062201985416 1.0 17.859776658897125 -5.995695611957972 24.994013350228826 1.050015377394427 0.9782240068671539 0.03312230158182117 0.15206807490171972 472.3702864308614 2742845.6817248343 0.04812069117740268 0.05434561817955753 1.0099604985482143e-06 5.995695611957972 -0.07179137052727302 SDGEAKPEPSPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 SDGEAKPEPSPSPR 14 1 K7ENQ6;K7ERQ1;P26358;K7EJL0 K7ENQ6;P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 SDGEAKPEPS(0.101)PS(0.899)PR;SDGEAKPEPS(0.271)PS(0.729)PR;SDGEAKPEPS(0.004)PS(0.996)PR 142.57 0.00056621 1687340000.0 2784480.0 2428280.0 2232930.0 2350080.0 2519710.0 2239630.0 2211960.0 2317760.0 2391750.0 2428680.0 True False 2630019.3436767375 2311621.783877411 2376868.2406143225 2573430.896622685 2717996.8418112285 2225651.6384214354 2435566.503449256 2309720.2315292493 1957468.4911109912 2407163.7846844504 1.0925801395028467 0.9603093061573441 0.987414423454323 1.0690717902105817 1.1291283373007062 0.9245950161688691 1.0117992464598868 0.9595193506253358 0.8131845882550078 1.0 21.19890287620229 -7.018909499520367 1.3999013487248326 0.9125178409886089 1.0338888571826452 0.31291736514333435 0.0712275123438789 0.5448087293843199 2.035364778343252 0.05147846274868625 0.02390286984263213 9.57393557018535e-08 7.018909499520367 0.12137101619403634 SDGIYIINLK ddPTM_KYSE-520_SHP099_60min_R1 2 SDGIYIINLK 10 0 C9J9K3;A0A0C4DG17;P08865;F8WD59 C9J9K3 RPSA 40S ribosomal protein SA 0 ; 156.94 0.00073217 410830000.0 743740.0 818750.0 585100.0 393270.0 661890.0 753980.0 548350.0 607330.0 687860.0 658500.0 False True 702483.2595910679 779416.0210311952 622816.4821931007 430646.2625590632 713976.977361058 749274.1311453193 603782.5693802773 605223.313981887 562961.9635395033 652666.2023052477 1.0763285384011982 1.1942031290700532 0.9542649519666925 0.659826203713323 1.093938945879621 1.148020425293738 0.9251016327300065 0.9273091081539228 0.862557248331682 1.0 19.315985807090865 -4.775614473686628 22.923747289263346 0.9452588820710432 1.1352657440135199 0.2601953024896577 0.1273902697454805 107.37768100057475 173652.00054606714 0.03536329212641541 0.07434639272799597 1.676430394923033e-05 4.775614473686628 0.19000686194247662 SDGLLQLWK ddPTM_KYSE-520_SHP099_60min_R1 2 SDGLLQLWK 9 0 R4GND3;Q8WV24 R4GND3 PHLDA1 Pleckstrin homology-like domain family A member 1 0 ; 144.09 0.0027351 264950000.0 407900.0 511030.0 341650.0 311650.0 525150.0 471280.0 401030.0 407410.0 431130.0 418640.0 False True 385272.9738715096 486479.3517283315 363673.3056593278 341269.12229901063 566476.3173052319 468338.56670756027 441570.02607563144 405996.78980020835 352847.6599028665 414931.1752969916 0.9285226003945021 1.1724338412994117 0.8764665740023622 0.8224716353374592 1.3652295875328486 1.128713855670984 1.0642006490825202 0.9784677892896615 0.850376353741827 1.0 18.66251253067434 -7.453890851505023 4.154692235981139 0.9214268016672403 1.054711302828712 0.10227212579039502 0.1513188042721931 0.5191848134399056 17.168825735491954 0.09912665392888025 0.04206000623893864 3.516488071019329e-08 7.453890851505023 0.13328450116147172 SDIIFFQR ddPTM_KYSE-520_SHP099_60min_R1 2 SDIIFFQR 8 0 Q14116-2;Q14116 Q14116-2 IL18 Interleukin-18 0 ; 120.92 0.011237 0.0 2595400.0 2566300.0 1840900.0 1728610.0 2685100.0 2507200.0 2333320.0 2081410.0 2031900.0 2364900.0 False True 2451427.988198373 2443011.0959051657 1959567.3595441452 1892896.574674451 2896402.093870849 2491551.634801382 2569194.756608718 2074190.0745147453 1662958.180030696 2343948.8258643574 1.0458538860354092 1.042262983281761 0.83601115259909 0.8075673640086507 1.2356933999200124 1.0629718564280493 1.0960967783335878 0.8849126958861248 0.7094686375746542 1.0 21.160509641866913 -7.445760902373736 6.352094264911197 0.8362562223546619 1.013241634362578 0.21644976768086743 0.13319685320609628 0.34127931666168376 22.74296560825399 0.07888151961781245 0.03683329905681836 3.5829363873588644e-08 7.445760902373736 0.17698541200791618 SDIS(ph)PLTPR ddPTM_KYSE-520_SHP099_60min_R1 8 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SDIS(0.999)PLTPR;S(0.005)DIS(0.995)PLT(0.001)PR;SDIS(1)PLTPR;S(0.007)DIS(0.993)PLTPR;SDIS(1)PLTPR;SDIS(1)PLTPR;SDIS(1)PLTPR;SDIS(1)PLTPR 175.54 5.2626e-05 5788480000.0 8833130.0 7811800.0 7725690.0 6875920.0 7376600.0 7207410.0 6691610.0 7183330.0 8610940.0 7306370.0 True False 8343138.670491906 7436509.40224914 8223700.33894105 7529405.369479275 7957096.452887305 7162425.880737006 7368063.24262015 7158412.704831829 7047410.360132656 7241641.246069842 1.1521060470953135 1.0269093910562135 1.1356127788578574 1.0397374177525858 1.0987973834254428 0.9890611309451669 1.0174576442348506 0.9885069505088805 0.9731786097464303 1.0 22.787885276194036 -6.263959528285292 24.986382752511638 0.9944110964924714 1.0867638151791381 0.6316195397753068 0.03697478749143486 145.37660056888413 1441352.878083629 0.011824593919235894 0.010911434116940611 5.445533971732408e-07 6.263959528285292 0.09235271868666672 SDISPLT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 SDISPLTPR 9 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SDISPLT(1)PR;SDISPLT(1)PR;SDISPLT(1)PR;SDISPLT(1)PR;SDISPLT(1)PR;SDIS(0.001)PLT(0.999)PR 204.34 4.5493e-06 9137030000.0 11092570.0 11886280.0 9449900.0 8155230.0 9173140.0 11344250.0 9386880.0 12055400.0 15191000.0 12300580.0 True False 10477243.029609926 11315245.267129974 10059055.674374593 8930300.60724069 9895013.929972988 11273446.327814126 10335797.437520454 12013582.631151512 12432697.333946701 12191606.43090644 0.8593816646713184 0.9281176628573871 0.8250804134288896 0.7324958083129925 0.81162511159223 0.9246891614902591 0.847779781614226 0.9853978390162246 1.0197751546858569 1.0 23.539384899866672 -7.26268466783295 1.6252049267628113 1.0188221248146627 0.8398858999904566 0.633271544484878 0.05364281813302812 0.2842446586739167 1.360355123330398 0.046352663262819976 0.018011360762979985 5.461542683877455e-08 7.26268466783295 -0.17893622482420612 SDKGS(ph)PGEDGFVPSALGTR ddPTM_KYSE-520_SHP099_60min_R1 7 SDKGSPGEDGFVPSALGTR 19 1 G3V238;A0A494BZY7;Q5JPI9 G3V238 METTL10 Protein-lysine N-methyltransferase METTL10 1 S(0.002)DKGS(0.997)PGEDGFVPS(0.001)ALGTR;S(0.001)DKGS(0.999)PGEDGFVPSALGTR;S(0.276)DKGS(0.724)PGEDGFVPSALGTR;SDKGS(0.995)PGEDGFVPS(0.003)ALGT(0.002)R;S(0.001)DKGS(0.999)PGEDGFVPSALGTR;S(0.056)DKGS(0.944)PGEDGFVPSALGTR;SDKGS(1)PGEDGFVPSALGTR 198.47 6.9183e-13 8430520000.0 5453940.0 4873750.0 4690590.0 4332390.0 4918980.0 5323050.0 4393980.0 4938510.0 5815560.0 5136370.0 True False 5151399.076040156 4639607.734352107 4992952.936609352 4744139.043019446 5306075.740832317 5289826.870464859 4838166.379512268 4921379.461466905 4759600.902337386 5090865.757835395 1.0118905744296232 0.9113592766046222 0.9807669606932093 0.9318923870105396 1.042273749345225 1.0390819797837414 0.9503621996054021 0.966707765548987 0.9349295637999969 1.0 22.279479592683007 -2.700698649518567 10.8589294176346 0.9758399358072236 1.0426331330096856 0.0 0.043377359415301436 0.0 0.0 0.01013749815718144 0.0 0.0019920551169506076 2.700698649518567 0.06679319720246202 SDKNQQGFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 SDKNQQGFSPK 11 1 D6RCT7;C9JKA9;Q9NS87-4;Q9NS87-2;Q9NS87 D6RCT7 KIF15 Kinesin-like protein;Kinesin-like protein KIF15 1 S(0.001)DKNQQGFS(0.999)PK;SDKNQQGFS(1)PK;SDKNQQGFS(1)PK;SDKNQQGFS(1)PK;SDKNQQGFS(1)PK;SDKNQQGFS(1)PK 181.88 3.5838e-06 20370380000.0 18846700.0 17233870.0 16045080.0 14892540.0 16561810.0 15540790.0 14681030.0 15485560.0 20574100.0 14951000.0 True False 17801235.981035 16405929.016633736 17079371.5298357 16307922.5239946 17865130.223191384 15443794.165046642 16165131.785445308 15431844.206716875 16838362.07085464 14818545.771702003 1.2012808986310144 1.1071213916255571 1.1525673161836871 1.1005076189822056 1.2055926741008043 1.0421936405216383 1.0908716708433557 1.0413872214226343 1.1363032736322716 1.0 23.820900538920384 -6.276607906467957 24.990537907680366 1.0665328923707915 1.1478558925462363 0.49221252702379104 0.046068144290284975 749.5396602262211 1234882.2280644202 0.015143999318532195 0.01341000786127315 5.289225627590682e-07 6.276607906467957 0.0813230001754448 SDKQYAENYTRPS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 3 SDKQYAENYTRPSSR 15 2 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 SDKQYAENYT(0.33)RPS(0.46)S(0.21)R;SDKQYAENYTRPS(0.597)S(0.403)R;SDKQYAENY(0.001)T(0.073)RPS(0.463)S(0.463)R 144.01 7.0528e-06 3698720000.0 1714810.0 1779610.0 1708070.0 1386210.0 1418570.0 1281870.0 1104840.0 1089130.0 2025600.0 1059780.0 True False 1619686.070911015 1694114.8643509324 1818174.9252086298 1517954.9816207679 1530203.3884407945 1273869.3738444652 1216528.009399299 1085352.0622348534 1657802.101220623 1050391.1736963643 1.5419837023299439 1.6128418695573015 1.730950307598651 1.4451330319913387 1.4567938371530236 1.2127571191993867 1.1581666334060037 1.033283684606241 1.5782711648144927 1.0 20.002495267935334 -5.96980314059473 1.5414601866983313 1.189915956192044 1.6172133057078102 0.5793078715256892 0.15818250660921945 0.2728597114231504 1.3286841992054026 0.06086450034660512 0.06945659048074707 1.072005119533896e-06 5.96980314059473 0.42729734951576614 SDKQYAENYTRPSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 SDKQYAENYTRPSSR 15 2 C9JSU1;Q9Y608-4;Q9Y608;Q9Y608-2;Q9Y608-5 C9JSU1 LRRFIP2 Leucine-rich repeat flightless-interacting protein 2 1 SDKQYAENY(0.002)T(0.194)RPS(0.251)S(0.554)R;SDKQYAENYTRPS(0.147)S(0.853)R 116.94 0.00011461 3224900000.0 1492850.0 1615840.0 1625320.0 1289380.0 1184860.0 1134860.0 1068630.0 1044120.0 1928700.0 970720.0 True False 1410038.6345773062 1538212.6209747146 1730090.7278039474 1411922.2875337685 1278101.7410687944 1127776.9177850585 1176657.5492237548 1040498.1914194413 1578496.6985704065 962120.1760087325 1.4655535449082073 1.5987738947080903 1.7982064724815048 1.4675113595382636 1.3284221378361303 1.1721788461640392 1.2229839666235989 1.0814638517776987 1.640644004700801 1.0 19.875857583092543 -5.707526922111365 2.6077349004503296 1.2320428803313368 1.6195935342625936 0.4911823181792523 0.17612378565431008 0.22917422301431994 3.1808378056306306 0.055062061131095595 0.07187071557529368 1.960979609695171e-06 5.707526922111365 0.38755065393125676 SDKS(ph)PDLAPTPAPQSTPR ddPTM_KYSE-520_SHP099_60min_R1 14 SDKSPDLAPTPAPQSTPR 18 1 F8WAE5;Q9BY44-2;Q9BY44-4;Q9BY44-3;Q9BY44 F8WAE5 EIF2A Eukaryotic translation initiation factor 2A;Eukaryotic translation initiation factor 2A, N-terminally processed 1 S(0.049)DKS(0.945)PDLAPT(0.006)PAPQSTPR;S(0.076)DKS(0.924)PDLAPTPAPQSTPR;S(0.052)DKS(0.948)PDLAPTPAPQSTPR;S(0.25)DKS(0.75)PDLAPTPAPQSTPR;S(0.002)DKS(0.966)PDLAPT(0.032)PAPQSTPR;SDKS(1)PDLAPTPAPQSTPR;SDKS(1)PDLAPTPAPQSTPR;SDKS(1)PDLAPTPAPQSTPR;SDKS(1)PDLAPTPAPQSTPR;SDKS(1)PDLAPTPAPQSTPR;SDKS(1)PDLAPTPAPQSTPR;SDKS(1)PDLAPTPAPQSTPR;SDKS(1)PDLAPTPAPQSTPR;S(0.023)DKS(0.977)PDLAPTPAPQSTPR 282.72 1.5563e-37 122399000000.0 77025500.0 72437600.0 64481070.0 57523950.0 64933720.0 67993280.0 62602510.0 72191880.0 85319200.0 68024550.0 True False 72752741.96847247 68957588.96494566 68637622.94555975 62991008.91279372 70043634.34167199 67568908.71869345 68930982.65242006 71941463.2179915 69827384.00200562 67421905.40929905 1.0790668333505475 1.0227772197526 1.0180314918256972 0.9342810549537777 1.0388854173796658 1.0021803493760966 1.022382595596488 1.0670339673916884 1.0356779977976536 1.0 26.00671406408932 -7.01227949494926 23.755907448998684 1.0397552487831472 1.0135085481962345 0.03834226186333056 0.03714134566485065 809.8025231381454 1566637.397126676 0.0169348660393622 0.010425338897759321 9.7212140309299e-08 7.01227949494926 -0.026246700586912697 SDLDYIRS(ph)PLPFQNR ddPTM_KYSE-520_SHP099_60min_R1 4 SDLDYIRSPLPFQNR 15 1 A0A0A0MRF6;Q99996-5;Q99996-3;Q99996;Q99996-1;Q99996-6;H7BYL6 A0A0A0MRF6 AKAP9 A-kinase anchor protein 9 1 SDLDYIRS(1)PLPFQNR;SDLDYIRS(1)PLPFQNR;SDLDYIRS(1)PLPFQNR;SDLDYIRS(1)PLPFQNR 205.65 3.6567e-12 4110480000.0 2064070.0 2003820.0 1880110.0 1983320.0 2030290.0 1963610.0 2248570.0 2371860.0 2855550.0 2431000.0 True False 1949571.9224784672 1907553.479404862 2001304.8988823602 2171814.1364931013 2190062.2722301036 1951354.3816258553 2475877.3995284233 2363632.571256286 2337054.1025575395 2409463.2312893798 0.8091312194190197 0.7916922967046357 0.8306019668170652 0.9013684493250785 0.9089419766983255 0.8098709937904403 1.0275638853403475 0.980978892129195 0.969948025024191 1.0 21.20028035486308 -6.059004448317153 0.47410572123468464 1.010522065811806 0.7774563912201988 0.6892743702949936 0.04685083232719908 0.7201098922009314 0.3322116208214243 0.044004505791936904 0.07426211122794371 8.729624269122545e-07 6.059004448317153 -0.2330656745916071 SDLRKS(ph)PVFS(ph)DEDS(ph)DLDFDISK ddPTM_KYSE-520_SHP099_60min_R1 1 SDLRKSPVFSDEDSDLDFDISK 22 2 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 3 S(0.041)DLRKS(0.965)PVFS(0.994)DEDS(0.995)DLDFDIS(0.006)K 48.244 0.061471000000000005 0.0 252530.0 311410.0 270990.0 187340.0 216740.0 162720.0 148000.0 165760.0 333630.0 174380.0 True False 238521.6574939255 296449.3961640601 288458.4489993304 205144.73727417507 233796.20491809203 161704.40412208065 162961.2843408063 165185.01724867488 273051.20212788123 172835.12886558697 1.3800531122317305 1.7152149456526709 1.6689804375571307 1.1869388973217079 1.352712301328014 0.935599175835587 0.9428713098454684 0.9557375189458067 1.5798362515772577 1.0 17.399036950557566 -5.50439585042106 1.8118003187202987 1.0924452458691476 1.6013157770277144 0.47480585898143124 0.2137219928606674 0.2965088194959666 1.9515072298325509 0.0706600179916752 0.11571392686466846 3.13043110046685e-06 5.50439585042106 0.5088705311585668 SDPES(ph)PIKK ddPTM_KYSE-520_SHP099_60min_R1 12 SDPESPIKK 9 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7C0Q4 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 SDPES(1)PIKK;SDPES(1)PIKK;S(0.002)DPES(0.998)PIKK;S(0.002)DPES(0.998)PIKK;S(0.028)DPES(0.972)PIKK;S(0.004)DPES(0.996)PIKK;SDPES(1)PIKK;SDPES(1)PIKK;SDPES(1)PIKK;S(0.001)DPES(0.999)PIKK;SDPES(1)PIKK;S(0.001)DPES(0.999)PIKK 160.91 5.68e-05 52913430000.0 62692800.0 56921800.0 53262400.0 52956500.0 55613800.0 56614700.0 56160300.0 61770800.0 71668600.0 57484200.0 True False 59215105.409001626 54187191.28663626 56695779.526853085 57989469.83804768 59990289.66076299 56261346.6571434 61837531.19570931 61556531.51221303 58655388.85838279 56974934.710030824 1.039318530339209 0.9510707043793459 0.9951003860803268 1.0178066922442344 1.0529242370540408 0.9874754037627393 1.0853462405955578 1.080414252785016 1.0294946217473437 1.0 25.763824030458252 -5.47525882246745 2.684203056315701 1.0431388920953693 0.9906442222565315 0.23192143856184477 0.03521948972030951 0.35743553994724353 5.103208278477499 0.010800417250116521 0.01645451102294581 3.3476587237460586e-06 5.47525882246745 -0.05249466983883777 SDPFLEFFR ddPTM_KYSE-520_SHP099_60min_R1 2 SDPFLEFFR 9 0 Q99829;Q5JX61;F2Z2V0;A6PVH9;E7ENH5;Q5JX45;Q5JX52;Q5JX44;Q5JX60;Q5JX59;Q5JX58;B0QZ18;Q5JX56 Q99829 CPNE1 Copine-1 0 ; 109.71 0.007205 751890000.0 143663.0 147854.0 112765.0 94414.0 153611.0 130871.0 114815.0 102348.0 114820.0 103380.0 False True 135693.72700490974 140750.87190662153 120034.01233037918 103387.07817339573 165699.3117729677 130054.18554486745 126421.62068641651 101992.97867620274 93971.58237665481 102464.133628423 1.32430463421465 1.3736599034452577 1.1714734520244103 1.0090074888869864 1.6171445158933504 1.2692654584529772 1.233813396059866 0.9954017573219438 0.9171168393170076 1.0 16.64475947400573 -7.234900879239074 2.909565236362839 0.954370282530653 1.292037990313479 0.49966156392643757 0.14564227030546964 0.23921896426149847 4.032445672668681 0.09033947692487589 0.04250001683275944 5.822360886710769e-08 7.234900879239074 0.33766770778282607 SDPVDPDKEPEKEDVSASGPS(ph)PEATQLAK ddPTM_KYSE-520_SHP099_60min_R1 1 SDPVDPDKEPEKEDVSASGPSPEATQLAK 29 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 SDPVDPDKEPEKEDVS(0.01)AS(0.009)GPS(0.935)PEAT(0.047)QLAK 58.318999999999996 0.029641000000000004 1074500000.0 353250.0 387370.0 342880.0 284800.0 311260.0 305450.0 296170.0 334710.0 412700.0 317240.0 True False 333654.5183135831 368760.1637457758 364982.5934273977 311867.306371758 335754.39117285836 303543.57324907574 326109.7539406526 333548.9691319016 337764.0833203742 314429.5004089849 1.0611425387235989 1.172791240217988 1.1607771947373176 0.9918512924713038 1.0678208970091412 0.965378798281492 1.0371474480494831 1.060806853994449 1.0742124478811228 1.0 18.262377054937744 -5.257068903603555 24.942480682788084 1.0301169664968002 1.1356924202563372 0.5476111052620521 0.042991715200912044 263.96174917051184 1506433.7763985153 0.011748343792988914 0.019460957947095073 5.53262323637771e-06 5.257068903603555 0.10557545375953703 SDQDSDS(ph)DQPSR ddPTM_KYSE-520_SHP099_60min_R1 1 SDQDSDSDQPSR 12 0 Q6PD62 Q6PD62 CTR9 RNA polymerase-associated protein CTR9 homolog 1 SDQDS(0.335)DS(0.665)DQPS(0.001)R 104.41 0.0023141 39724000.0 108550.0 86151.0 84761.0 83963.0 96214.0 105590.0 87810.0 87343.0 111570.0 92546.0 True False 102528.5151109397 82012.17664471269 90224.829682395 91942.81827560355 103785.49441722482 104930.97364337822 96686.6917430148 87040.02751900945 91311.70045082185 91726.11443969859 1.117767995921627 0.8940984489060428 0.9836329624723115 1.0023625097086983 1.1314716103608002 1.1439596486163228 1.054080316533819 0.9489121833044634 0.9954820501074514 1.0 16.485044907361882 -3.8992217678872407 20.154834369108006 1.0217142354196276 11.438543677290555 0.1450838608319669 0.07253166316412873 1294.344250460259 258320.26881022452 0.019466375425946453 1290.3923572036686 0.0001261183360180477 3.8992217678872407 10.416829441870927 SDQDYILK ddPTM_KYSE-520_SHP099_60min_R1 4 SDQDYILK 8 0 Q9UQ80;Q9UQ80-2;F8VR77;F8VZ69;H0YIN7;F8W0A3 Q9UQ80 PA2G4 Proliferation-associated protein 2G4 0 ;;; 154.49 0.0024649999999999997 2330270000.0 3564740.0 4036790.0 3066210.0 2470220.0 3862680.0 4125750.0 3309860.0 4035440.0 4059670.0 4033130.0 False True 3366996.7660669843 3842856.5490546785 3263862.8027094593 2704988.966101275 4166650.940357181 4099999.6638807454 3644452.9499206804 4021442.000518781 3322536.263952568 3997399.605927661 0.8422967673970184 0.9613391023895099 0.8164965038445355 0.6766871548418883 1.0423403590120288 1.0256667003721471 0.9117059361581956 1.006014508670954 0.8311744112411599 1.0 21.930630370422133 -5.786481967843634 24.999794517799184 0.9697046333549681 0.8334494141386196 0.40312038453223276 0.08631010729249772 254.69537822852962 254258.79500700248 0.02769240173800123 0.03141294190292941 1.6350010359027373e-06 5.786481967843634 -0.13625521921634853 SDQVNGVLVLSLLDK ddPTM_KYSE-520_SHP099_60min_R1 2 SDQVNGVLVLSLLDK 15 0 Q6NZI2;Q6NZI2-2 Q6NZI2 PTRF Polymerase I and transcript release factor 0 ; 222.75 1.6077e-13 100363000.0 105153.0 165844.0 211885.0 159122.0 212066.0 146325.0 145669.0 136727.0 216120.0 145919.0 False True 99319.95347269149 157876.605303081 225543.44612798642 174244.90703822643 228754.38770951403 145411.73139849727 160394.64411243834 136252.72594932158 176878.0559418446 144626.27118326415 0.6867352152558613 1.0916177538935967 1.5594915383124794 1.204794299214358 1.5816931864311594 1.0054309649886348 1.1090284137187856 0.9421021840262204 1.2230008731796203 1.0 17.141970114300133 SDQWKPLNLEEK ddPTM_KYSE-520_SHP099_60min_R1 2 SDQWKPLNLEEK 12 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13;C9J2Z7;C9K073 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ; 215.87 1.0790000000000001e-10 1724830000.0 1765520.0 1620220.0 999380.0 1025650.0 1567480.0 1634800.0 1093640.0 1283460.0 1313590.0 1411600.0 False True 1667583.086123134 1542382.1992002004 1063801.6338645355 1123127.467627083 1690831.7582587912 1624596.6068017292 1204195.8040978338 1279007.9768218172 1075075.1689091604 1399094.3222081815 1.1919018322447328 1.1024147369605992 0.7603501901040841 0.8027532167055458 1.2085187763396554 1.161177328085814 0.8606966556745506 0.9141685135303581 0.7684079277888687 1.0 20.416061796726712 -6.800086996485968 24.990468288887932 0.8786654687572618 1.0252449207333398 0.1884366121782557 0.15294790126486466 326.92094808725705 211391.96881167992 0.07013380346384725 0.04728520884387498 1.5845757435061062e-07 6.800086996485968 0.14657945197607802 SDS(ph)DSSTLAK ddPTM_KYSE-520_SHP099_60min_R1 4 SDSDSSTLAK 10 0 Q6AWC2-4;Q6AWC2;Q6AWC2-6;Q6AWC2-7;Q6AWC2-3;Q6AWC2-2 Q6AWC2-4 WWC2 Protein WWC2 1 S(0.001)DS(0.95)DS(0.013)S(0.013)T(0.023)LAK;S(0.001)DS(0.644)DS(0.078)S(0.078)T(0.199)LAK;SDS(0.985)DS(0.002)S(0.009)T(0.004)LAK;SDS(0.987)DS(0.003)S(0.003)T(0.008)LAK 176.62 2.5316e-05 2005330000.0 5068230.0 4555400.0 4378060.0 4589920.0 4595370.0 4688940.0 4634840.0 4710810.0 5296500.0 4564520.0 True False 4787085.17863398 4336551.746205196 4660276.7527436735 5026144.6167902285 4956999.474921338 4659674.586186024 5103374.858879342 4694469.299621317 4334789.113899598 4524081.903942828 1.0581340657121923 0.9585484609431594 1.0301044171375742 1.110975602013271 1.0956918066848467 1.0299713146495038 1.1280465224185372 1.0376623145416515 0.9581588498921167 1.0 22.109193617427888 -3.846287716843673 20.720664420289733 1.0440180166301136 22.674802006666585 0.0029060717157453064 0.055910650947691924 11095.033820638962 1455846.0934929536 0.013665793696977032 304381.93496243405 0.00014246634520196478 3.846287716843673 21.63078399003647 SDS(ph)DSSTLSK ddPTM_KYSE-520_SHP099_60min_R1 5 SDSDSSTLSK 10 0 H0YAU4;H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03 H0YAU4 WWC1 Protein KIBRA 1 SDS(0.974)DS(0.013)S(0.003)T(0.009)LSK;S(0.001)DS(0.996)DS(0.002)ST(0.001)LSK;S(0.001)DS(0.992)DS(0.001)S(0.002)T(0.003)LSK;SDS(0.74)DS(0.247)S(0.012)T(0.001)LSK;S(0.006)DS(0.964)DS(0.013)S(0.013)T(0.002)LSK 212.2 5.1346e-09 5316540000.0 9939300.0 8304450.0 8033310.0 8574650.0 9049280.0 8609980.0 8974220.0 8545360.0 10359000.0 8699760.0 True False 9387947.21549667 7905491.756766413 8551150.01635045 9389582.157937467 9761406.852639992 8556241.921110082 9881421.737546954 8515718.140662022 8478066.729139226 8622686.89471086 1.0887496357145034 0.9168246340494663 0.9917036442081307 1.0889392451089717 1.1320609192742022 0.9922941683477415 1.1459794212878356 0.9875944986342422 0.9832279465394547 1.0 23.039706063424962 -3.9292150061213422 21.123641811004198 1.0311770421472735 2.889569355299291 0.06413637725103372 0.06928973740748001 2152.2392415677828 665287.3992963792 0.01727826151428033 6755.31186244207 0.00011770231205495275 3.9292150061213422 1.8583923131520177 SDS(ph)EEKS(ph)DSEKKEDEEGK ddPTM_KYSE-520_SHP099_60min_R1 1 SDSEEKSDSEKKEDEEGK 18 3 Q99442 Q99442 SEC62 Translocation protein SEC62 2 S(0.421)DS(0.915)EEKS(0.659)DS(0.006)EKKEDEEGK 102.94 0.0011871 1572100000.0 340530.0 383520.0 321610.0 462700.0 374020.0 341130.0 411330.0 582490.0 549510.0 337790.0 True False 321640.1220702747 365095.1235247435 342341.4951941939 506674.8688841727 403453.24611730536 339000.8811342512 452911.2505939444 580469.4781441881 449732.83601981803 334797.44339664344 0.960700651734724 1.0904955540302785 1.0225331822161283 1.5133773536134847 1.2050666875592702 1.0125551667747588 1.3527918433276935 1.733793042907112 1.3432982983893564 1.0 18.352928985559636 -4.5076317624148174 0.6274176316663584 1.3490859714028864 0.7733834950434526 0.21222435785013027 0.216942023225985 4.000749819032533 1.474186503818336 0.11465746769016423 1.589375040759526 3.107193055454673e-05 4.5076317624148174 -0.5757024763594338 SDS(ph)ENVYEVIQDLHVPPR ddPTM_KYSE-520_SHP099_60min_R1 1 SDSENVYEVIQDLHVPPR 18 0 A0A0G2JP16;A0A0G2JRG8;A0A0G2JNY3 A0A0G2JP16 1 S(0.157)DS(0.706)ENVY(0.137)EVIQDLHVPPR 70.80199999999999 0.01012 36292000.0 18113.0 15069.0 17568.0 14679.0 13508.0 16937.0 13485.0 17421.0 18876.0 17622.0 True False 17108.23578262969 14345.062620969858 18700.461389793854 16074.08774659773 14571.002749993466 16831.289900538846 14848.19540091737 17360.570617091962 15448.594225237199 17465.88278970854 0.9795231073410394 0.8213190706525542 1.070685153161154 0.9203135014778125 0.8342551547740358 0.963666715458344 0.8501256752774274 0.9939704065414529 0.8845011964891926 1.0 14.09225194321827 -10.20591539436388 4.675500881114718 1.0000147630316927 0.9238063417898178 0.08342674111255288 0.07529845908413896 1.093010457278627e-05 1.8562512538763371e-06 0.06877101663969513 0.01667619078779292 6.22421528340418e-11 10.20591539436388 -0.07620842124187488 SDS(ph)FENPVLQQHFR ddPTM_KYSE-520_SHP099_60min_R1 4 SDSFENPVLQQHFR 14 0 B1AHC9;P12956-2;P12956 B1AHC9 XRCC6 X-ray repair cross-complementing protein 6 1 SDS(1)FENPVLQQHFR;SDS(1)FENPVLQQHFR;SDS(1)FENPVLQQHFR;S(0.002)DS(0.998)FENPVLQQHFR 266.23 5.8692000000000005e-25 1350440000.0 1185950.0 1421810.0 1177700.0 1184460.0 1465230.0 967630.0 1077670.0 1104440.0 1199120.0 984370.0 True False 1120162.9893672867 1353504.1134196797 1253616.4263866253 1297030.7222791163 1580535.2649817104 961590.6622458774 1186611.4006456514 1100608.9554182333 981390.0353552891 975649.2476282713 1.1481205895359599 1.3872855605740941 1.2849048256164506 1.329402677685755 1.61998307160475 0.9855905332612419 1.2162274542108373 1.128078516017646 1.0058840692400195 1.0 19.896003057002932 -6.287830160621825 24.992528976915683 1.084477972855731 1.3505935703268346 0.5574017802744817 0.12729008074359077 620.7867538516167 587893.7847917425 0.04456162962300531 0.039311166200028995 5.154301742557051e-07 6.287830160621825 0.2661155974711036 SDS(ph)GGSSSEPFDR ddPTM_KYSE-520_SHP099_60min_R1 1 SDSGGSSSEPFDR 13 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 SDS(0.999)GGSSSEPFDR 139.48 0.00020943 217340000.0 958790.0 987300.0 962240.0 925970.0 953200.0 891450.0 943540.0 1028500.0 1269400.0 856580.0 True False 905604.0073995213 939868.6260324876 1024267.5300384356 1013973.9103969679 1028211.4170338877 885886.1298834136 1038922.2312630008 1024932.3735537044 1038908.9589699133 848991.3676091564 1.0666822325293974 1.107041439866757 1.2064522315731834 1.194327703534158 1.2110976109562017 1.0434571700983915 1.2237135392656682 1.2072353296594938 1.2236979062526674 1.0 19.69539035922717 -4.582125574670643 4.991428803173769 1.1715686800767235 1.0751779032716888 0.14707125497346485 0.07482268922329831 0.29127247667506145 14.435721976149706 0.018419717682556756 0.053628843181326116 2.61742607955695e-05 4.582125574670643 -0.09639077680503472 SDS(ph)IKFQHR ddPTM_KYSE-520_SHP099_60min_R1 4 SDSIKFQHR 9 1 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 S(0.017)DS(0.983)IKFQHR;S(0.004)DS(0.996)IKFQHR;S(0.006)DS(0.994)IKFQHR;S(0.229)DS(0.771)IKFQHR 135.02 0.00032265 2453150000.0 2759000.0 2944460.0 3031030.0 3389960.0 3235390.0 2480030.0 2858400.0 3107460.0 3561160.0 2706520.0 True False 2605952.7700698534 2803003.721875433 3226415.0436194735 3712140.7791713593 3489996.786149049 2464551.2128495807 3147354.9672956816 3096680.9465466193 2914543.113538125 2682542.3384407 0.9714488873956165 1.0449056783591175 1.2027452455773406 1.3838144233463026 1.3010034310130232 0.9187371164781569 1.1732731752987602 1.1543828785743038 1.086485410415659 1.0 21.35516951047425 -8.041471880634582 2.7780619614328077 1.0002254288872043 1.1492254422264971 0.09952211627749974 0.13313138887439943 0.748414087121505 13.903291312217721 0.1384319099030266 0.0372629782210566 9.089251475474977e-09 8.041471880634582 0.1490000133392928 SDS(ph)KSSPQAGRR ddPTM_KYSE-520_SHP099_60min_R1 2 SDSKSSPQAGRR 12 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.003)DS(0.332)KS(0.332)S(0.332)PQAGRR;S(0.001)DS(0.333)KS(0.333)S(0.333)PQAGRR 58.21 0.041333999999999996 179090000.0 173355.0 198392.0 138305.0 108077.0 172462.0 196401.0 118585.0 102600.0 228190.0 344880.0 True False 163738.65257537496 188860.950527537 147220.36159582427 118348.60558546509 186033.77822544973 195175.18850774798 130572.72907807089 102244.10454702002 186756.44820178422 341824.63151257957 0.4790136154051531 0.5525083130838881 0.4306897397778849 0.3462260898571603 0.5442374863456949 0.570980469266052 0.38198747849236153 0.2991127470673725 0.5463516405338723 1.0 18.382896834238117 -8.029129448194862 23.522414359427113 1.0000000032800762 0.4526987951327573 0.785776369067443 0.08569357969685856 740.199955520498 597720.8699400822 0.08789353541494825 0.02269401325167174 9.351269035507444e-09 8.029129448194862 -0.547301208147319 SDS(ph)LLSFR ddPTM_KYSE-520_SHP099_60min_R1 9 SDSLLSFR 8 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.003)DS(0.997)LLSFR;S(0.001)DS(0.999)LLSFR;S(0.006)DS(0.994)LLSFR;S(0.128)DS(0.756)LLS(0.115)FR;SDS(0.994)LLS(0.006)FR;S(0.001)DS(0.999)LLSFR;SDS(0.997)LLS(0.003)FR;S(0.002)DS(0.997)LLS(0.001)FR;SDS(0.999)LLSFR 200.11 2.5513e-06 8201710000.0 5278580.0 4491650.0 4541990.0 4428460.0 4858310.0 4389200.0 4498130.0 5039780.0 5800640.0 4736190.0 True False 4985766.644811647 4275864.391895893 4834773.942840949 4849339.506934958 5240631.356997391 4361805.374708928 4952844.87791832 5022298.179473492 4747389.998234786 4694231.041300058 1.0621050819498754 0.9108764256119146 1.029939493881828 1.0330423586462294 1.1163982579660179 0.9291842127781027 1.0550918423790745 1.0698873010908676 1.01132431626544 1.0 22.162457419692917 -4.956339399416347 24.999942069556052 1.0337820133829183 0.9824699677076638 0.08459380974390829 0.05712910881997102 275.0723763859928 157502.7550629295 0.01429783953460067 0.029763315496887877 1.1057592997159334e-05 4.956339399416347 -0.05131204567525449 SDS(ph)NQYIGELKDQIAELNHELR ddPTM_KYSE-520_SHP099_60min_R1 1 SDSNQYIGELKDQIAELNHELR 22 1 O60447;O60447-2 O60447 EVI5 Ecotropic viral integration site 5 protein homolog 1 S(0.176)DS(0.821)NQY(0.003)IGELKDQIAELNHELR 104.83 0.00052182 27668000.0 38469.0 30410.0 31072.0 24541.0 24066.0 31916.0 24044.0 28264.0 36777.0 26540.0 True False 36335.047883949715 28949.0579536594 33074.95083695778 26873.369261479293 25959.857283190908 31716.800405360922 26474.602166826633 28165.95878086719 30099.223872724528 26304.876247807566 1.3813046501968673 1.1005205909711215 1.2573695662116822 1.021611696946079 0.9868838400391481 1.205738438248856 1.0064522606919017 1.070750476661708 1.1442450285328072 1.0 14.68304264242982 -1.0000000000208185 0.7756556208128463 1.0713466944050039 63.591853688954664 0.5294563360993639 0.08471685053620022 350.63278020573665 1.3498188750082258 0.0298627422232319 38423.08445145805 0.09999999999520637 1.0000000000208185 62.52050699454966 SDS(ph)PEIPFQAAAGPSDGLDASSPGNSFVGLR ddPTM_KYSE-520_SHP099_60min_R1 4 SDSPEIPFQAAAGPSDGLDASSPGNSFVGLR 31 0 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.152)DS(0.848)PEIPFQAAAGPSDGLDASSPGNSFVGLR;S(0.17)DS(0.83)PEIPFQAAAGPSDGLDASSPGNSFVGLR;S(0.159)DS(0.841)PEIPFQAAAGPSDGLDASSPGNSFVGLR;S(0.143)DS(0.857)PEIPFQAAAGPSDGLDASSPGNSFVGLR 162.02 3.7774000000000003e-10 1683150000.0 1488580.0 1702790.0 1028750.0 886460.0 952990.0 1458220.0 970520.0 1259840.0 1487830.0 1442170.0 True False 1406005.4999893398 1620985.4124601032 1095064.8710581993 970708.8918760836 1027984.8912286265 1449118.7080807567 1068629.6329624262 1255469.9090888654 1217677.5771421213 1429393.4957912809 0.9836378185077763 1.1340372103503669 0.7661045571303621 0.67910543509135 0.7191755763933686 1.0137997076015492 0.7476105327951392 0.8783235076873389 0.8518840898097425 1.0 20.44697169798996 -4.764325813194694 24.99997291496253 0.8216437379318838 1.058837541436407 0.39736716634204816 0.11115503191778202 64.59435347437756 559485.9326275531 0.028977182081857667 0.06490270557636392 1.7205772919055336e-05 4.764325813194694 0.23719380350452324 SDS(ph)PVPTAPTSGGPKPSTASAVPELATDPELEKK ddPTM_KYSE-520_SHP099_60min_R1 1 SDSPVPTAPTSGGPKPSTASAVPELATDPELEKK 34 2 F5H6D8;B4DTN4;Q86U44;B4E349 F5H6D8 METTL3 N6-adenosine-methyltransferase 70 kDa subunit 1 S(0.001)DS(0.998)PVPTAPTSGGPKPSTASAVPELATDPELEKK 169.7 1.9816e-10 5787200000.0 1663300.0 1536700.0 1392600.0 1160000.0 1304100.0 1690300.0 1110400.0 1512200.0 1841900.0 1509800.0 True False 1571033.4332936527 1462874.625366273 1482369.224238782 1270246.0512332842 1406725.2506859982 1679750.2107150508 1222650.0684596703 1506954.531150134 1507457.39052047 1496424.346606624 1.0498582416519862 0.977580075253099 0.9906075289407619 0.8488541730250283 0.9400577141610716 1.1225092765458853 0.8170476985570438 1.0070368973663044 1.0073729379897254 1.0 20.51308791295513 SDS(ph)SADCQWLDTLR ddPTM_KYSE-520_SHP099_60min_R1 2 SDSSADCQWLDTLR 14 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 S(0.003)DS(0.871)S(0.126)ADCQWLDTLR;S(0.008)DS(0.924)S(0.068)ADCQWLDTLR 189.07 1.0034999999999998e-10 235946000.0 383340.0 359340.0 333280.0 318060.0 313910.0 336070.0 297300.0 341040.0 384130.0 318020.0 True False 362075.36603065545 342076.7670196634 354763.76206685446 348288.3267717737 338612.93109642086 333972.46247116296 327353.9853683897 339857.0118393346 314381.6751292837 315202.5902158159 1.1487068230713025 1.085260012569843 1.125510300610003 1.1049665757292932 1.0742707757083347 1.0595485977526249 1.038551063759514 1.0782176999454165 0.9973955953662369 1.0 18.26591986480267 -6.199327315965553 0.3077671250674467 0.9929153526287081 1.157069850135768 0.7854718410998828 0.02176004769803662 1.1030547474612313 0.21263987053176972 0.028666147144811884 0.06453867891908359 6.319353992926659e-07 6.199327315965553 0.1641544975070598 SDS(ph)VDYGQTHYYHQR ddPTM_KYSE-520_SHP099_60min_R1 2 SDSVDYGQTHYYHQR 15 0 Q9UPU9-2;Q9UPU9-3;Q9UPU9 Q9UPU9-2 SAMD4A Protein Smaug homolog 1 1 S(0.019)DS(0.981)VDYGQTHYYHQR;S(0.014)DS(0.986)VDYGQTHYYHQR 118.52 9.2183e-05 899620000.0 656790.0 568230.0 489930.0 499740.0 662060.0 633710.0 452140.0 642650.0 734230.0 640950.0 True False 620356.5494215946 540931.3778693812 521511.6717157162 547235.139347691 714160.3553938909 629754.7808272112 497846.7236611627 640420.7971456375 600912.3404320773 635271.681651554 0.9765216478858564 0.8514961291255568 0.8209269935658252 0.8614190670753825 1.1241810016420775 0.9913156827485209 0.7836752967909425 1.0081053754524316 0.9459139416853107 1.0 19.277014184349255 SDS(ph)VSASER ddPTM_KYSE-520_SHP099_60min_R1 4 SDSVSASER 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 SDS(0.953)VS(0.047)ASER;SDS(1)VSASER;SDS(1)VSASER;SDS(0.984)VS(0.016)ASER 238.86 2.5173000000000003e-13 1513254000.0 5288660.0 3956172.0 4183303.0 4880020.0 4224278.0 5339000.0 5241640.0 5239710.0 5744660.0 5015220.0 True False 4995287.487117671 3766111.5587847647 4452965.404901453 5343815.633568486 4556704.645745995 5305677.320598507 5771516.124676646 5221534.668967506 4701574.5550938295 4970789.052582116 1.0049284800212614 0.7576486386660138 0.8958266701316414 1.0750437359220864 0.916696443470877 1.0673712492068903 1.1610865123472873 1.0504438256648887 0.9458406915601376 1.0 22.2450434496614 -5.181091802565657 5.559292406067869 1.0350402511951262 0.869786215078103 0.37297205683380796 0.085498570365664 0.21968348196463236 11.540253484966904 0.023525432222939534 0.04137194146880138 6.590345716701966e-06 5.181091802565657 -0.16525403611702316 SDS(ph)YSQSLK ddPTM_KYSE-520_SHP099_60min_R1 6 SDSYSQSLK 9 0 Q9H8W4 Q9H8W4 PLEKHF2 Pleckstrin homology domain-containing family F member 2 1 SDS(0.999)YS(0.001)QSLK;SDS(0.999)YSQSLK;S(0.002)DS(0.997)YSQSLK;S(0.009)DS(0.989)YS(0.002)QSLK;SDS(1)YSQSLK;SDS(1)YSQSLK 259.28 3.4039e-19 6342400000.0 5091000.0 4889650.0 4567460.0 4664790.0 4772380.0 4901570.0 4888820.0 5245340.0 5991170.0 5343260.0 True False 4808592.081343106 4654743.874485723 4861885.779794388 5108130.239079748 5147939.154872207 4870977.483484932 5383029.63588527 5227145.139811555 4903324.553105231 5295922.873393371 0.9079800058081271 0.8789296947414169 0.9180431618859901 0.9645401493180557 0.9720570480237483 0.9197598983090639 1.0164478910615413 0.9870130786973212 0.9258678176261692 1.0 22.336450681087292 -5.154828114095884 2.8224880620304456 0.969428694123871 0.8935967488629961 0.5464323190417717 0.0288174543455604 0.20455478768796412 3.1461034421642915 0.008224930920247783 0.016087633048544228 7.0011903563152895e-06 5.154828114095884 -0.07583194526087489 SDSEEKS(ph)DSEKKEDEEGK ddPTM_KYSE-520_SHP099_60min_R1 3 SDSEEKSDSEKKEDEEGK 18 3 Q99442 Q99442 SEC62 Translocation protein SEC62 1 SDS(0.001)EEKS(0.976)DS(0.023)EKKEDEEGK;S(0.005)DS(0.171)EEKS(0.823)DS(0.001)EKKEDEEGK;SDSEEKS(0.997)DS(0.003)EKKEDEEGK 135.68 1.1687e-05 2362140000.0 1850900.0 1938780.0 1632920.0 2618950.0 1932160.0 2137650.0 2142240.0 2636970.0 2999740.0 1541390.0 True False 1748226.8873223248 1845638.0986318905 1738180.635964379 2867854.2205839674 2084209.9995134263 2124308.1334289946 2358798.5254476243 2627822.9665434263 2455062.833291642 1527734.483783275 1.1443263904032746 1.208088262864474 1.1377504758941857 1.8771941400982362 1.3642488414296299 1.3904956364985408 1.543984606282046 1.720078321486792 1.6069957570192008 1.0 20.54296239789775 -5.20668336684631 24.999176641467027 1.5219920426135176 1.1678579697261566 0.3239806551499206 0.22155016235145647 336.45332476319953 153609.01106672824 0.057566944141510853 0.09970882085066725 6.213218592359644e-06 5.20668336684631 -0.354134072887361 SDSFENPVLQQHFR ddPTM_KYSE-520_SHP099_60min_R1 2 SDSFENPVLQQHFR 14 0 B1AHC9;P12956-2;P12956 B1AHC9 XRCC6 X-ray repair cross-complementing protein 6 0 ; 233.24 4.8348e-18 1075240000.0 1326260.0 1283550.0 861780.0 800340.0 1282420.0 1158650.0 856940.0 1047780.0 1012770.0 1098750.0 False True 1252689.7139662362 1221886.331352171 917331.7176967523 876404.0729690051 1383339.1580283246 1151418.4355706058 943567.85812845 1044145.4957336897 828876.4978540728 1089015.9298145648 1.1502951239469394 1.1220096032573474 0.8423492187602375 0.804766990982618 1.2702653103190846 1.0573017382460759 0.8664408226692503 0.9587972656299752 0.7611243097198882 1.0 20.054593626865117 -6.760239625775327 24.980380845100807 0.8931570434683505 1.0354706690881055 0.19921770456972476 0.14165779675893092 59.19686162909833 1232596.9378440573 0.059687915796062516 0.04360183287315266 1.736842246434326e-07 6.760239625775327 0.14231362561975502 SDSKEDENLVINEVINS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SDSKEDENLVINEVINSPK 19 1 Q5FWF5-2;Q5FWF5 Q5FWF5-2 ESCO1 N-acetyltransferase ESCO1 1 SDSKEDENLVINEVINS(1)PK 87.102 0.00045304 0.0 188710.0 213880.0 189460.0 180260.0 174150.0 149490.0 163280.0 176250.0 203900.0 168460.0 True False 178241.88011594157 203604.8837595748 201672.89474671823 197391.85620285498 187854.6142220434 148556.97745950002 179785.93585923524 175638.6298870594 166876.8999007133 166967.5754598967 1.067523916694549 1.2194276834814426 1.2078566403760067 1.1822167008124627 1.1250963769738842 0.8897354893626119 1.0767715549802501 1.0519325647706093 0.9994569271372981 1.0 17.349208437824455 -6.038326485239699 9.755069961477489 1.0108478823542095 1.1729249211661013 0.6384601814726922 0.05960607388693092 0.35318696757756607 88.17480356218066 0.019481147502018747 0.019669039081981695 9.155319709971981e-07 6.038326485239699 0.16207703881189173 SDSKS(ph)SPQAGRR ddPTM_KYSE-520_SHP099_60min_R1 1 SDSKSSPQAGRR 12 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.005)DS(0.212)KS(0.6)S(0.183)PQAGRR 60.968 0.027596 478840000.0 413600.0 459620.0 329400.0 277090.0 358730.0 480090.0 310020.0 239630.0 530760.0 843370.0 True False 390656.783508841 437539.16529631533 350633.65105863445 303424.55028985353 386960.0101055047 477093.5802296573 341359.8471036266 238798.77946006245 434387.36337078264 835898.397931931 0.4673496019077824 0.5234358223186176 0.41946922248699814 0.36299214239499245 0.46292708666851123 0.5707554667050673 0.40837480721122793 0.2856791926517227 0.5196652660723914 1.0 19.672968070202643 -8.032498451883715 23.885616228098616 1.0000000021773117 0.4392577768233128 0.8328767120433314 0.07514994734440571 1040.769473212641 764940.7195153176 0.0765581178781009 0.019767221034715527 9.279007977810906e-09 8.032498451883715 -0.5607422253539989 SDSKSS(ph)PQAGRR ddPTM_KYSE-520_SHP099_60min_R1 1 SDSKSSPQAGRR 12 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.004)DS(0.239)KS(0.239)S(0.517)PQAGRR 57.288000000000004 0.038627999999999996 454090000.0 391780.0 425760.0 316760.0 225370.0 339960.0 379090.0 230440.0 205070.0 449780.0 661110.0 True False 370047.18240593217 405305.85052121134 337178.85643392 246789.09704003856 366712.9178921953 376723.95869370445 253735.12407767164 204358.6600336976 368111.29003110743 655253.0797357967 0.5647393256894545 0.618548562464802 0.5145780567256139 0.376631723943283 0.5596508116223687 0.5749289401975838 0.38723224953018104 0.31187745064257716 0.561784906344176 1.0 19.32169270377512 -8.0322314947819 24.083501313754223 1.0000000027828249 0.4884310631426752 0.7213927225800629 0.09481707934746185 1616.3135785649017 1207714.2861032677 0.09896896960562479 0.025553678085285757 9.284713457990663e-09 8.0322314947819 -0.5115689396401497 SDSLFQLWK ddPTM_KYSE-520_SHP099_60min_R1 2 SDSLFQLWK 9 0 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 0 ; 174.85 0.00042819 353390000.0 527210.0 615260.0 461520.0 427460.0 661380.0 551920.0 468710.0 503210.0 490320.0 436790.0 False True 497964.6103329213 585701.9860759127 491270.3176581089 468085.6698794649 713426.8432625618 548475.2625556712 516091.78096877853 501464.48196009686 401290.24796134245 432920.3804174779 1.150245247989294 1.3529092474489257 1.1347821444311825 1.081228075767826 1.6479400728941964 1.2669194784194735 1.192117082755716 1.1583295789320887 0.926937760644039 1.0 18.723742193756138 -7.50093351487808 1.9472641901575793 0.9623777094098865 1.2720767084425415 0.3730981992579767 0.1512515621922318 0.3871770637701423 2.651325500674934 0.13337866768108572 0.04415424823639278 3.1554876525921374e-08 7.50093351487808 0.30969899903265496 SDSLLS(ph)FR ddPTM_KYSE-520_SHP099_60min_R1 1 SDSLLSFR 8 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 SDS(0.468)LLS(0.532)FR 172.25 0.00011159 1620200000.0 519780.0 453300.0 500780.0 458810.0 497090.0 438940.0 397790.0 525840.0 555340.0 489930.0 True False 490946.7672442588 431522.7875828282 533061.0800763295 502415.1644537433 536208.1549447917 436200.41264347394 438002.4952562788 524015.9837719782 454504.25498215866 485589.6013597722 1.011032291197104 0.8886573896443758 1.0977604927774922 1.0346497598936537 1.1042414282416158 0.8982902669703053 0.9020013897121404 1.079133454062036 0.9359843244365884 1.0 18.889378001822585 -6.270011418950425 24.988268269508207 0.9642102028975668 1.0238939860303446 0.1593992925908051 0.07347269049852562 1401.493905044948 4085471.5515705803 0.026668451676255887 0.02393819622493384 5.370176763224594e-07 6.270011418950425 0.05968378313277789 SDSPES(ph)DAER ddPTM_KYSE-520_SHP099_60min_R1 2 SDSPESDAER 10 0 O75400-3;O75400;O75400-2 O75400-3 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 SDSPES(1)DAER;SDS(0.017)PES(0.983)DAER 153.74 9.187e-05 487860000.0 1052930.0 886190.0 847520.0 933040.0 981190.0 964140.0 1022350.0 1047730.0 993330.0 1015490.0 True False 994521.8739360834 843616.1022016908 902152.4952799466 1021715.8410712958 1058404.070792574 958122.4446304257 1125699.1151744816 1044095.6691720214 812966.3118115531 1006493.5486392658 0.9881055624058718 0.8381733825738098 0.8963321190678434 1.0151240834604551 1.0515756133991012 0.9519409696423432 1.1184364934046287 1.0373595246423506 0.8077213340419788 1.0 19.940906494314707 -5.259227041281185 24.39195049346578 1.0044077787424854 0.900600649892168 0.19190146379103223 0.08334162000950464 204.81060212403645 2258099.162473601 0.02285757308735967 0.03724640282931372 5.5051981938311425e-06 5.259227041281185 -0.1038071288503174 SDSPES(ph)DAEREK ddPTM_KYSE-520_SHP099_60min_R1 1 SDSPESDAEREK 12 1 O75400-3;O75400;O75400-2 O75400-3 PRPF40A Pre-mRNA-processing factor 40 homolog A 1 S(0.009)DS(0.39)PES(0.601)DAEREK 52.891000000000005 0.046018 396570000.0 1637100.0 1770200.0 1633100.0 1275400.0 1432100.0 1545800.0 1404100.0 1491600.0 2054300.0 1604000.0 True False 1546286.7995220604 1685156.934875631 1738372.2390523888 1396613.6325370083 1544798.1224656224 1536152.088814604 1546040.1306954457 1486425.9877420568 1681290.904688746 1589789.807893116 0.9726359999573099 1.059987255239044 1.0934604250332836 0.8784894868510219 0.9716996012906138 0.9662611253310299 0.9724808418191774 0.934982713036736 1.057555468239473 1.0 20.60040460328927 -5.242753701307774 24.998737657177827 0.9662429920519048 1.0438238230701178 0.30116142849061056 0.05100670071561413 974.9495239790151 1304340.0673168642 0.013510093426572679 0.02335242565447707 5.71802827668644e-06 5.242753701307774 0.077580831018213 SDSQASLTVPLS(ph)PQVVR ddPTM_KYSE-520_SHP099_60min_R1 3 SDSQASLTVPLSPQVVR 17 0 Q8TEV9-2;Q8TEV9 Q8TEV9-2 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein 1 SDSQASLT(0.001)VPLS(0.999)PQVVR;SDSQASLTVPLS(1)PQVVR;SDSQASLT(0.095)VPLS(0.905)PQVVR 202.35 8.303799999999999e-13 1453270000.0 1202690.0 1610110.0 1218970.0 1021840.0 971350.0 1447570.0 1059610.0 1333970.0 1641300.0 1430100.0 True False 1135974.3881969235 1532757.8987756176 1297546.756620959 1118955.3663726002 1047789.7187745152 1438535.178681172 1166725.7195970376 1329342.7694209372 1343281.2938059855 1417430.426600963 0.8014322021582542 1.0813637622068075 0.9154218311317837 0.7894252482330901 0.7392177415629094 1.0148894447897656 0.8231273279457375 0.9378539817356238 0.9476876385581836 1.0 20.43484649273782 -7.808301143274472 1.6368034057682805 0.9967805492100762 0.8855597596974503 0.12931605445958894 0.09940334594054881 0.8092037666792767 4.445433543875037 0.09643984800839961 0.028721358117748657 1.5548870865447034e-08 7.808301143274472 -0.11122078951262593 SDT(ph)SSPEVR ddPTM_KYSE-520_SHP099_60min_R1 1 SDTSSPEVR 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.001)DT(0.333)S(0.333)S(0.333)PEVR 132.01 0.0033256 730840000.0 2762900.0 2508500.0 2585200.0 2511500.0 2573900.0 2773500.0 2572700.0 2654800.0 2884400.0 2558000.0 True False 2609636.4292953997 2387987.8946647355 2751846.12846625 2750192.20488999 2776451.2865123013 2756189.5577224116 2832773.6231323793 2645591.118434975 2360665.669806854 2535338.110093886 1.0293050930389567 0.9418814339426729 1.0853961124594724 1.0847437641317779 1.0951009947976866 1.0871092682862513 1.1173159161116695 1.0434865108926266 0.9311048733138935 1.0 21.273746725715988 -7.639206604906108 5.93360785147767 0.9671552149854924 1.063343643510888 0.38194407806066955 0.04877017137164163 0.23116233920736226 10.851760935650347 0.03763359067739953 0.013642622977406253 2.2950565717160435e-08 7.639206604906108 0.09618842852539566 SDTPLGS(ph)PLEPGQILEK ddPTM_KYSE-520_SHP099_60min_R1 2 SDTPLGSPLEPGQILEK 17 0 H0YEX2 H0YEX2 TAF2 1 SDTPLGS(1)PLEPGQILEK;SDTPLGS(1)PLEPGQILEK 236.16 3.4936999999999997e-23 174645000.0 269089.0 280870.0 229055.0 247292.0 246398.0 335150.0 310328.0 376300.0 344180.0 381600.0 True False 254162.0967543774 267376.58360553475 243820.25180095775 270794.5573289493 265788.1207871549 333058.20453241974 341698.9827494168 374994.7031290801 281685.58807173866 378219.3208803075 0.6719965975371478 0.7069352855460009 0.6446530844417593 0.7159723006711383 0.7027354397668834 0.8805954274287865 0.9034413735239928 0.991474211989694 0.7447678437371045 1.0 18.5288635379525 -6.275332404989192 3.0871230981673143 0.908532607718262 0.6848817785597056 0.7206889185966903 0.06736407077487071 0.13669544739817072 2.6674866149018963 0.02354943606956039 0.021685951690129702 5.304782656383736e-07 6.275332404989192 -0.2236508291585565 SDTSISDFLS(ph)EEDDIVPSKK ddPTM_KYSE-520_SHP099_60min_R1 7 SDTSISDFLSEEDDIVPSKK 20 1 Q4AC94;Q4AC94-2;Q4AC94-4;Q4AC94-1;Q4AC94-3 Q4AC94 C2CD3 C2 domain-containing protein 3 1 SDTSISDFLS(1)EEDDIVPSKK;SDTSISDFLS(1)EEDDIVPSKK;SDTSISDFLS(1)EEDDIVPSKK;SDTSISDFLS(1)EEDDIVPSKK;SDTSISDFLS(1)EEDDIVPSKK;SDTSISDFLS(1)EEDDIVPSKK;SDTSISDFLS(1)EEDDIVPSKK 256.76 8.036899999999999e-29 1318777000.0 2097680.0 1958421.0 1818258.0 1766182.0 1891373.0 1844072.0 1732944.0 1957420.0 2434300.0 1868651.0 True False 1981317.5087785905 1864335.5155101472 1935465.819995663 1934039.4062580203 2040213.2946597133 1832562.4626242227 1908126.891423608 1950630.1668852647 1992292.4837092008 1852096.2059284805 1.0697702972645147 1.006608355193693 1.0450136519908197 1.044243490196267 1.1015698256543467 0.9894531702825528 1.030252578303317 1.0532013189387146 1.0756960018232087 1.0 20.820727609720937 SDVLELTDDNFESR ddPTM_KYSE-520_SHP099_60min_R1 4 SDVLELTDDNFESR 14 0 H7BZJ3 H7BZJ3 PDIA3 0 ;;; 265.12 7.1786e-24 764930000.0 705629.0 795550.0 1244340.0 400872.0 799570.0 875600.0 653585.0 657228.0 1052770.0 783550.0 False True 666486.3527334622 757330.5838551045 1324552.1474143935 438970.7543534382 862491.6100690174 870135.0556126707 719655.7501749047 654948.2294661681 861613.5061720143 776608.3565926747 0.8582013663330039 0.9751769697378092 1.7055599983829572 0.5652408329462196 1.1105875989451757 1.1204296840563743 0.9266649580392794 0.8433442981990517 1.1094569081799412 1.0 19.56682770569807 -5.296179631019689 24.99998266192481 0.9595084221548968 1.1592004130599338 0.13704331442028606 0.2580384879760331 1347.6275354027766 969784.8777042859 0.07236769696382919 0.10734389328753272 5.056154882390861e-06 5.296179631019689 0.19969199090503698 SDVS(ph)PIIQPVPSIK ddPTM_KYSE-520_SHP099_60min_R1 4 SDVSPIIQPVPSIK 14 0 P40818;P40818-2;A0A075B720 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.007)DVS(0.993)PIIQPVPSIK;S(0.026)DVS(0.974)PIIQPVPSIK;S(0.042)DVS(0.958)PIIQPVPSIK;SDVS(1)PIIQPVPSIK 207.55 1.0743e-12 5931340000.0 5472300.0 6340700.0 4729050.0 3833070.0 4097780.0 5597500.0 4510170.0 5517400.0 6547500.0 5888900.0 True False 5168740.610240404 6036083.254415269 5033892.129747525 4197363.820345482 4420251.972821154 5562563.926212801 4966101.998617387 5498261.42717084 5358639.049043251 5836728.927494871 0.885554336075503 1.0341551456983562 0.862450902257007 0.7191294768844085 0.7573166456298545 0.9530276281993204 0.8508364976868718 0.9420107555912655 0.9180894154259076 1.0 22.47672863668087 -7.767304046980444 1.0003211526697953 0.9935965351231255 0.8634205028572758 0.19502909062982743 0.08483680656142502 0.9475889906735083 2.0055667451870027 0.08888672529571756 0.03083626719293828 1.7088185625203333e-08 7.767304046980444 -0.13017603226584973 SDVYYFS(ph)PSGK ddPTM_KYSE-520_SHP099_60min_R1 2 SDVYYFSPSGK 11 0 X6RBL6;Q9UBB5-3;Q9UBB5 X6RBL6 MBD2 Methyl-CpG-binding domain protein 2 1 SDVYYFS(0.997)PS(0.003)GK;SDVYY(0.001)FS(0.921)PS(0.079)GK 102.73 0.0012465 970750000.0 1517920.0 1473870.0 1296160.0 1264900.0 1352120.0 1720990.0 1405220.0 1655100.0 1809670.0 1786930.0 True False 1433717.951701498 1403063.0728760283 1379712.5475293244 1385115.7156939476 1458524.1514895738 1710248.6630411728 1547273.3512255915 1649358.8444032422 1481079.546068286 1771099.1904105027 0.8095074287562589 0.7921990368878371 0.779014837226331 0.7820655800609946 0.8235135329442047 0.9656425073768872 0.8736232050712907 0.9312628300738799 0.8362487849847663 1.0 20.75621358181268 -6.087611284027793 5.076426768900429 0.913621706253737 0.7911663423261234 0.675623115609574 0.04326028195142142 0.1337943410617978 5.73720171450522 0.01357782775788049 0.013729255553573244 8.173135819058392e-07 6.087611284027793 -0.12245536392761358 SDYDMVDYLNELR ddPTM_KYSE-520_SHP099_60min_R1 5 SDYDMVDYLNELR 13 0 Q14974;J3KTM9;Q14974-2 Q14974 KPNB1 Importin subunit beta-1 0 ;;;; 207.88 3.204700000000001e-10 921310000.0 734263.0 852121.0 583437.0 434210.0 753133.0 893189.0 610778.0 594916.0 624377.0 738063.0 False True 693531.9676729988 811183.8281003026 621046.2825522057 475477.1878500032 812400.2823594044 887614.2761393625 672521.4008588437 592852.3752504378 511005.8760633041 731524.3360243245 0.9480641087652586 1.1088952043740747 0.8489755596204182 0.6499813669004071 1.110558107710569 1.2133762780379294 0.9193424849183434 0.8104342481242133 0.6985493863956868 1.0 19.480546334532082 -7.130865184680329 4.736574452392928 0.8177609453579889 0.9772930777597615 0.13021490406971048 0.1623622990009773 0.4658830312319671 15.817892714949327 0.08517046358027952 0.04799473820704753 7.398349017367685e-08 7.130865184680329 0.15953213240177255 SEAAPAS(ph)LEGGSLKSPPPFFYR ddPTM_KYSE-520_SHP099_60min_R1 1 SEAAPASLEGGSLKSPPPFFYR 22 1 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 SEAAPAS(0.768)LEGGS(0.075)LKS(0.157)PPPFFYR 75.529 0.004215399999999999 285090000.0 404010.0 394520.0 322280.0 354450.0 329660.0 436950.0 398560.0 489740.0 552070.0 450080.0 True False 381598.75992603163 375566.6670134071 343054.6844662316 388136.82143072196 355602.3664911789 434222.83297162707 438850.33437075454 488041.2062461755 451828.00455216644 446092.64135694114 0.8554249152491518 0.8419028519972768 0.7690211688377444 0.8700812016312867 0.7971491424056996 0.9733916068437981 0.9837650157954709 1.0940355455351913 1.012856888151706 1.0 18.766983824374325 -6.457033372264382 2.2850927635406295 1.0328564942653442 0.8255216574880272 0.8470447351717345 0.039667669217484845 0.10702258548374659 1.1074890313289851 0.016042644922857518 0.013010210546647211 3.491134877021752e-07 6.457033372264382 -0.207334836777317 SEAAPASLEGGSLKS(ph)PPPFFYR ddPTM_KYSE-520_SHP099_60min_R1 6 SEAAPASLEGGSLKSPPPFFYR 22 1 Q8WYL5-4;Q8WYL5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 SEAAPAS(0.003)LEGGS(0.013)LKS(0.976)PPPFFY(0.007)R;SEAAPASLEGGSLKS(1)PPPFFYR;SEAAPASLEGGS(0.013)LKS(0.986)PPPFFYR;SEAAPASLEGGS(0.001)LKS(0.999)PPPFFYR;SEAAPASLEGGSLKS(1)PPPFFYR;SEAAPASLEGGS(0.002)LKS(0.998)PPPFFYR 209.4 1.7431e-19 6020540000.0 1659026.0 1670501.0 1411848.0 1358444.0 1450935.0 1930448.0 1799209.0 2137727.0 2456400.0 2076407.0 True False 1566996.5205936616 1590247.6244868801 1502857.981116672 1487550.1093289184 1565115.329809131 1918399.3579686745 1981090.604307686 2130311.7239862345 2010379.6808048638 2058011.6494001998 0.7614128525707603 0.7727107011033452 0.7302475579060375 0.722809372708099 0.7604987708720106 0.9321615640648998 0.962623610456757 1.0351310327165089 0.9768553454936866 1.0 20.972819717972154 -6.369452657316491 2.330403997546198 0.9969266069053907 0.7445860996753587 0.9660400316567437 0.021980233850995814 0.05333127802134507 0.5678699116885064 0.00944142196195043 0.008115441278628111 4.271174772172833e-07 6.369452657316491 -0.252340507230032 SEAEDLAEPLS(ph)STEGVAPLSQAPS(ph)PLAIPAIK ddPTM_KYSE-520_SHP099_60min_R1 1 SEAEDLAEPLSSTEGVAPLSQAPSPLAIPAIK 32 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 2 S(0.001)EAEDLAEPLS(0.332)S(0.332)T(0.334)EGVAPLS(0.067)QAPS(0.933)PLAIPAIK 84.641 0.0022689 43543000.0 42827.0 39834.0 43029.0 44719.0 52059.0 37954.0 51567.0 48879.0 75444.0 52380.0 True False 40451.30093649212 37920.31484794704 45802.718188834246 48969.080314742394 56155.74712480826 37717.115007678534 56779.89560542129 48709.45015744437 61745.27138847181 51915.95395102335 0.77916898097747 0.7304173758170838 0.8822474538760045 0.94323760979022 1.0816664792056918 0.7265033604748982 1.0936887658654313 0.9382366392303233 1.189331345942738 1.0 15.663890331410222 -4.0175506181184595 0.35699209928352227 1.0500304548801602 0.43106517689551727 0.41247088442519964 0.11575257315013592 7.551377498417561 0.6736827992595471 0.10474549206135848 2.091902947415354 9.603938755320582e-05 4.0175506181184595 -0.618965277984643 SEAEDLAEPLSSTEGVAPLSQAPS(ph)PLAIPAIK ddPTM_KYSE-520_SHP099_60min_R1 1 SEAEDLAEPLSSTEGVAPLSQAPSPLAIPAIK 32 0 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 1 SEAEDLAEPLSSTEGVAPLS(0.11)QAPS(0.89)PLAIPAIK 76.859 0.00798 0.0 33645.0 37034.0 32378.0 25526.0 25258.0 41603.0 24087.0 39319.0 39711.0 34754.0 True False 31778.644780355316 35254.83105083271 34465.13768663168 27951.983365328248 27245.660901638643 41343.34024515073 26521.949026466213 39182.611566123596 32500.483432845624 34446.106598202845 0.9225612970150102 1.0234779640573968 1.000552488809572 0.8114700361168419 0.790964889572168 1.2002326047294916 0.769954913506827 1.137504799110384 0.9435168918202579 1.0 15.072053305617075 -6.221941113774674 24.99991914134748 1.0038183805721346 0.9156989725187358 0.13432263160898228 0.12652249773720117 1302.2541697925046 824245.1986577305 0.04119319153768607 0.04119264079628187 5.998724077679631e-07 6.221941113774674 -0.0881194080533988 SEAEEGEVRT(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 5 SEAEEGEVRTPTK 13 1 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0;Q9H4G0-4;H7C2K6 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 SEAEEGEVRT(0.971)PT(0.029)K;SEAEEGEVRT(1)PTK;SEAEEGEVRT(1)PTK;SEAEEGEVRT(0.999)PT(0.001)K;SEAEEGEVRT(1)PTK 198.95 3.3448e-08 3670670000.0 3031460.0 3176240.0 2463940.0 2407050.0 2536180.0 3411670.0 2980770.0 3754920.0 4601000.0 3423880.0 True False 2863298.8707343107 3023648.6627665632 2622769.5148433903 2635815.3082940276 2735762.9371097432 3390376.5020352714 3282095.3211117857 3741895.0589249143 3765574.3817713656 3393547.0869383304 0.8437480893531931 0.8909994720286935 0.7728696398344842 0.7767139340541961 0.8061661933731875 0.9990657018093951 0.9671577370311084 1.1026501071187036 1.1096278570186806 1.0 21.694362600607377 -6.499255895075508 1.7601697781320833 1.0643892663325207 0.815726119288291 0.812884735567011 0.0521797595590227 0.15342712539255776 0.9553646918959983 0.025587177357548428 0.019592523686060626 3.167700440010479e-07 6.499255895075508 -0.24866314704422976 SEALS(ph)S(ph)VLDQEEAMEIK ddPTM_KYSE-520_SHP099_60min_R1 1 SEALSSVLDQEEAMEIK 17 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 SEALS(1)S(1)VLDQEEAMEIK 155.88 1.9074e-06 159820000.0 290040.0 276600.0 210580.0 243140.0 270510.0 246770.0 225190.0 255710.0 332740.0 229960.0 True False 273950.9030195945 263311.7208149355 224154.32373991294 266247.9524972933 291797.59800864203 245229.81689531647 247954.40284260933 254823.00169316298 272322.80369280704 227922.73330617274 1.201946374746179 1.1552674759354702 0.9834662847729295 1.1681500508316456 1.2802478882905683 1.075933994551982 1.0878879839929247 1.1180236301872293 1.1948031674707538 1.0 17.79818530247313 -10.80049882229289 13.050343301290583 0.9996580822469525 1.137239937085347 0.22941663914167454 0.07709849961193742 0.0007947536203070098 1.2149381204728963e-05 0.07735210972725227 0.018715991208251445 1.5830738596341385e-11 10.80049882229289 0.13758185483839447 SEALSS(ph)VLDQEEAMEIK ddPTM_KYSE-520_SHP099_60min_R1 1 SEALSSVLDQEEAMEIK 17 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SEALS(0.003)S(0.997)VLDQEEAMEIK 348.39 3.4803000000000004e-59 35028000.0 69399.0 95019.0 70267.0 43922.0 55135.0 76127.0 50251.0 86540.0 94294.0 83521.0 True False 65549.29912652339 90454.14461357318 74796.52325117512 48096.33367436917 59473.81082476237 75651.86315512321 55330.861482499015 86239.8129385879 77172.58655830238 82781.06891835466 0.79183924516816 1.0926911888850617 0.9035462362167063 0.581006434234446 0.7184470024592243 0.9138787906898997 0.6683999398107646 1.0417818236153067 0.932249215511051 1.0 16.33701325717362 -7.283183700933999 24.837894268123435 0.9902616551168739 0.8161152260168253 0.26895964477689227 0.13676079308564515 1196.5930883255312 1366824.519722098 0.08007122082881238 0.03851893657001589 5.2097429912002625e-08 7.283183700933999 -0.17414642910004863 SEANDAVNS(ph)STK ddPTM_KYSE-520_SHP099_60min_R1 2 SEANDAVNSSTK 12 0 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.983)S(0.016)T(0.001)K;SEANDAVNS(0.969)S(0.027)T(0.005)K 206.43 3.2080999999999997e-09 454060000.0 1297260.0 1050230.0 959290.0 1040930.0 983020.0 1122000.0 1112270.0 1182930.0 1215360.0 1169520.0 True False 1225298.401776303 999775.3743726326 1021127.3683182674 1139859.6742329842 1060378.0813812986 1114997.1818152312 1224709.106309112 1178826.691927938 994681.2607323729 1159158.9626727917 1.0570581268258556 0.8625006634701319 0.8809209100741018 0.9833506110367234 0.9147822822646138 0.9619018768955276 1.056549744898814 1.0169672408086259 0.8581059999215589 1.0 20.144646994973098 -6.522247310718634 24.999936797607653 0.9878776994138554 0.9349647021806379 0.07530943336011697 0.0695534286522736 55.38812120988873 2193126.4510727176 0.026231556660229593 0.020564640504089206 3.004364967840802e-07 6.522247310718634 -0.05291299723321752 SEANDAVNS(ph)STKEEK ddPTM_KYSE-520_SHP099_60min_R1 1 SEANDAVNSSTKEEK 15 1 O15234;J3KSY7;K7EQ38 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.469)S(0.266)T(0.266)KEEK 221.13 3.6512e-14 0.0 119150.0 129560.0 122560.0 107340.0 125090.0 128030.0 120440.0 110340.0 126620.0 119650.0 True False 112540.51198036352 123335.74312647516 130460.41370293337 117541.56132705216 134933.8713352592 127230.91727968286 132615.25058112637 109957.25629354967 103628.99983044792 118589.99408629151 0.9489882586424103 1.0400181235925388 1.1000962999290176 0.9911591802721866 1.1378183494728495 1.0728638470721554 1.11826677792588 0.9272051756199577 0.8738426932970644 1.0 16.85562276348549 -7.2789258644378325 23.602988660567842 0.9253928885528265 1.0603687775407653 0.4678724150608171 0.0607632176707217 339.51533313905253 458268.10685161117 0.03279726849921455 0.015822606795076508 5.261070670121597e-08 7.2789258644378325 0.13497588898793877 SEANDAVNS(ph)STKEEKGEEKPDTK ddPTM_KYSE-520_SHP099_60min_R1 1 SEANDAVNSSTKEEKGEEKPDTK 23 3 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 SEANDAVNS(0.744)S(0.209)T(0.047)KEEKGEEKPDTK 75.10300000000001 0.008328499999999999 1948900000.0 447210.0 497680.0 462410.0 307990.0 369120.0 346200.0 333160.0 397170.0 545140.0 332280.0 True False 422402.3698089674 473770.7057670907 492217.68848215905 337261.2769994304 398167.64399449114 344039.23738363007 366839.06412826345 395792.30997017486 446156.3178610833 329336.2577099284 1.2825868999246643 1.4385622435303702 1.4945748515661244 1.0240636100762466 1.2090003292172824 1.0446442786953987 1.113873907109756 1.2017878405565032 1.3547136320898117 1.0 18.329201826147713 -5.25722194413211 24.9949735637947 1.1422315468372324 1.4085734283585376 0.5558869648902784 0.11038241456265485 274.6503565689017 1627731.7471750493 0.030408140101463504 0.05032492637952946 5.530673945169493e-06 5.25722194413211 0.2663418815213052 SEAPAEVTHFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 SEAPAEVTHFSPK 13 0 Q6PID6 Q6PID6 TTC33 Tetratricopeptide repeat protein 33 1 SEAPAEVT(0.007)HFS(0.993)PK;SEAPAEVTHFS(1)PK;SEAPAEVTHFS(1)PK;SEAPAEVTHFS(1)PK 269.05 2.7376999999999997e-22 2683250000.0 2508990.0 2338050.0 2337190.0 2166920.0 2349630.0 2481510.0 2140860.0 2198590.0 2878690.0 2457430.0 True False 2369811.3231524318 2225726.568515403 2487849.0070362203 2372863.4252917436 2534532.513434053 2466021.9756206037 2357279.0215801243 2190963.604444763 2355992.461869465 2435659.0820516124 0.9729651167585754 0.9138087447938822 1.0214274343109822 0.9742182076208405 1.0405941176706706 1.0124659866369377 0.9678197736912069 0.8995362366556092 0.9672915553867079 1.0 21.21588078341685 -9.571167215942522 8.663126321157488 0.9999998670697076 0.9747132947634225 0.03258367560451181 0.041730825252828896 0.0 0.0 0.043393349039783986 0.01052443303178377 2.6843107093642587e-10 9.571167215942522 -0.02528657230628506 SECDS(ph)SPEPK ddPTM_KYSE-520_SHP099_60min_R1 3 SECDSSPEPK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SECDS(0.5)S(0.5)PEPK;SECDS(0.5)S(0.5)PEPK;SECDS(0.5)S(0.5)PEPK 199.19 4.1383e-05 1242390000.0 3741680.0 3432290.0 3122200.0 2970940.0 3192530.0 3379290.0 3231470.0 3445110.0 3903540.0 3196920.0 True False 3534121.5515458444 3267397.63642768 3323462.0076966276 3253297.2443543207 3443763.947989088 3358198.5976260225 3558138.523708002 3433159.71750472 3194755.536235561 3168597.7759661204 1.1153582125040387 1.0311809410493684 1.0488746892726983 1.0267308993999325 1.0868416225341406 1.059837453367552 1.1229378972290383 1.0834949590463352 1.00825531106152 1.0 21.595413103942256 -7.7720901622634075 22.235363917122633 1.0041273105403394 1.0700724468832858 0.44092046100842 0.03047316850834742 60.49576126112547 126277.69206564449 0.029100165247707293 0.00791056132841607 1.6900900219104704e-08 7.7720901622634075 0.06594513634294641 SECDSS(ph)PEPK ddPTM_KYSE-520_SHP099_60min_R1 2 SECDSSPEPK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SECDS(0.131)S(0.869)PEPK;SECDS(0.224)S(0.776)PEPK 189.66 3.3514999999999996e-06 1306040000.0 4696100.0 4366600.0 3953600.0 3927000.0 4195600.0 4628700.0 4178800.0 4508600.0 5388600.0 4671000.0 True False 4435597.971556739 4156821.98159978 4208455.381983664 4300220.899304398 4525769.850301494 4599810.566370911 4601233.885157839 4492960.71891515 4410166.075551658 4629618.573983012 0.9580914497974828 0.8978756921703661 0.909028533286489 0.9288499323616585 0.9775686221182206 0.993561454980414 0.9938688925725576 0.9704818328153779 0.9525981471422705 1.0 22.142461906634544 -5.734620551070197 4.0768582769930015 0.9815796047451038 0.9193290821680946 0.6873082745803943 0.019164427485932282 0.12121847740872568 4.426421957965329 0.006013112977290605 0.00754141050628667 1.8423810115282728e-06 5.734620551070197 -0.06225052257700914 SECQDMSLSS(ph)PTSVLGGSR ddPTM_KYSE-520_SHP099_60min_R1 1 SECQDMSLSSPTSVLGGSR 19 0 O95613-2;O95613 O95613-2 PCNT Pericentrin 1 SECQDMSLS(0.025)S(0.971)PT(0.004)SVLGGSR 274.82 1.4380999999999997e-35 283670000.0 238430.0 299430.0 221310.0 195940.0 213640.0 281530.0 210390.0 265230.0 320260.0 296880.0 True False 225203.8126015787 285044.933346407 235575.99670851993 214562.0786884908 230452.25255467914 279772.86684174923 231658.27440852864 264309.97903514764 262108.8570976088 294249.8741691453 0.7653488832832042 0.9687172650498843 0.8005984620170218 0.7291832470424536 0.7831855602500852 0.9508002939057362 0.7872841919224177 0.8982501004680561 0.8907696488833137 1.0 18.166682272757154 -8.12961314783947 0.6805282397220074 1.0010195198140182 0.8239483868645299 0.34551238672251716 0.07361294354077333 1.0971784619382339 1.1327878744781776 0.07666099584969575 0.030033933481967163 7.419708650097368e-09 8.12961314783947 -0.17707113294948829 SEDARS(ph)SPS(ph)QR ddPTM_KYSE-520_SHP099_60min_R1 1 SEDARSSPSQR 11 1 A0A3B3ITP6;A0A3B3IS57;A0A3B3IT92;P33991;E5RFR3;E5RG53 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 2 SEDARS(0.902)S(0.106)PS(0.992)QR 124.47 0.0029013000000000003 157550000.0 188120.0 151810.0 160750.0 181700.0 155670.0 174870.0 200230.0 163290.0 214370.0 183170.0 True False 177684.60859207725 144516.81972854445 171112.2022090939 198968.7133699029 167920.3433588601 173778.57146526722 220471.2024564838 162723.58510217242 175445.81182793487 181547.25630410374 0.9787237340257222 0.7960286631182636 0.9425215544016241 1.0959610044264017 0.9249401328190955 0.9572084701416613 1.2144011809640343 0.8963153088339688 0.9663919763901662 1.0 17.469985601510356 -5.001501134633805 24.996633376600748 1.0075769982525782 0.8828509047040346 0.20827081275870518 0.09529758483355598 83.91609863447191 1397458.216547004 0.024690488564005852 0.0503204039378781 9.965494765552886e-06 5.001501134633805 -0.12472609354854358 SEDCILS(ph)LDSDPLLEMK ddPTM_KYSE-520_SHP099_60min_R1 1 SEDCILSLDSDPLLEMK 17 0 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 SEDCILS(0.963)LDS(0.037)DPLLEMK 119.56 0.00015475 0.0 23783.0 17606.0 16249.0 15482.0 17320.0 21004.0 17081.0 19642.0 23662.0 18130.0 True False 22463.709579764913 16760.181332855227 17296.43653931924 16953.40462516697 18682.985462680408 20872.9062449618 18807.71417449534 19573.866486477255 19365.57727047904 17969.38230492656 1.2501102819547765 0.9327077051647005 0.962550423036922 0.9434606230465116 1.0397121696029699 1.161581733348686 1.046653349310674 1.089289890677589 1.0776985508939667 1.0 14.133253196803784 -6.005319829795317 24.841414443567782 1.081272652598924 1.0090573746994043 0.060378576287495433 0.09204995681535416 482.32958996435696 2252294.689259514 0.028543466015212907 0.031456284336289615 9.87825357241992e-07 6.005319829795317 -0.07221527789951976 SEDCILSLDS(ph)DPLLEMKDDDFK ddPTM_KYSE-520_SHP099_60min_R1 1 SEDCILSLDSDPLLEMKDDDFK 22 1 Q7Z5K2;Q7Z5K2-2;Q7Z5K2-3 Q7Z5K2 WAPAL Wings apart-like protein homolog 1 SEDCILSLDS(1)DPLLEMKDDDFK 328.59 2.3951999999999995e-55 247870000.0 207820.0 231260.0 222750.0 222710.0 213730.0 221520.0 201510.0 222460.0 283020.0 208560.0 True False 196291.81032110075 220149.92247166313 237108.82141260142 243876.29143979689 230549.33504264912 220137.41151132804 221880.59734808034 221688.33818255452 231630.7023536043 206712.3206572249 0.9495893118368901 1.065006293634141 1.1470473586612222 1.1797859492090854 1.1153149183833668 1.0649457700993301 1.073378677393922 1.0724485965699317 1.120546185235372 1.0 17.657264854595184 -9.463320988795271 14.098219908059821 0.9999983662693208 1.0906504925490363 0.16504903280432037 0.058714616153874244 0.0 0.0 0.060356962024756475 0.014638713509968529 3.440955143786107e-10 9.463320988795271 0.09065212627971553 SEDDS(ph)AKFDS(ph)NEEDSASVFSPSFGLK ddPTM_KYSE-520_SHP099_60min_R1 6 SEDDSAKFDSNEEDSASVFSPSFGLK 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 S(0.001)EDDS(0.999)AKFDS(0.998)NEEDS(0.001)ASVFSPSFGLK;S(0.039)EDDS(0.961)AKFDS(0.999)NEEDS(0.001)ASVFSPSFGLK;S(0.125)EDDS(0.872)AKFDS(0.96)NEEDS(0.022)AS(0.02)VFS(0.001)PSFGLK;S(0.072)EDDS(0.928)AKFDS(1)NEEDSASVFSPSFGLK;S(0.335)EDDS(0.665)AKFDS(1)NEEDSASVFSPSFGLK;S(0.008)EDDS(0.992)AKFDS(1)NEEDSASVFSPSFGLK 219.93 7.8816e-22 1327310000.0 2375500.0 2412720.0 2105290.0 2264090.0 2411750.0 2165940.0 2360830.0 2491250.0 2775850.0 2464290.0 True False 2243726.27955815 2296809.309633445 2241000.3619831013 2479268.432876517 2601541.0040195985 2152421.565045353 2599485.7358804434 2482608.435212119 2271825.613484035 2442458.3077886086 0.9186344235245556 0.9403678672054658 0.9175183686193987 1.015070932826377 1.0651322054193109 0.8812521213490626 1.0642907302004294 1.0164384085064946 0.9301389531356775 1.0 21.219902505249674 -5.257477320063671 24.68656603117636 0.9976701472401723 0.9269929802148482 0.2705717774040898 0.05301135359334909 388.3918775009318 2419956.853620013 0.014333409880318185 0.023688287328558412 5.52742272764841e-06 5.257477320063671 -0.07067716702532412 SEDDSAKFDS(ph)NEEDSASVFSPSFGLK ddPTM_KYSE-520_SHP099_60min_R1 12 SEDDSAKFDSNEEDSASVFSPSFGLK 26 1 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 SEDDS(0.001)AKFDS(0.999)NEEDSASVFSPSFGLK;SEDDSAKFDS(1)NEEDSASVFSPSFGLK;SEDDS(0.062)AKFDS(0.938)NEEDSASVFSPSFGLK;SEDDSAKFDS(1)NEEDSASVFSPSFGLK;SEDDSAKFDS(1)NEEDSASVFSPSFGLK;SEDDSAKFDS(1)NEEDSASVFSPSFGLK;SEDDSAKFDS(1)NEEDSASVFSPSFGLK;SEDDSAKFDS(1)NEEDSASVFSPSFGLK;SEDDSAKFDS(1)NEEDSASVFSPSFGLK;SEDDS(0.007)AKFDS(0.993)NEEDSASVFSPSFGLK;SEDDS(0.007)AKFDS(0.993)NEEDSASVFSPSFGLK;SEDDSAKFDS(1)NEEDSASVFSPSFGLK 402.42 1.3869999999999996e-101 16199760000.0 9566290.0 9972060.0 8918520.0 9074300.0 9473490.0 8379150.0 8920560.0 9191180.0 11853470.0 9056090.0 True False 9035628.823773671 9492987.269232785 9493422.069336528 9936718.743712232 10218999.766215257 8326852.616762115 9822337.261075826 9159297.941817537 9701178.64966213 8975860.088131411 1.0066588310262647 1.0576131062676835 1.057661547319513 1.1070492015412923 1.138498112256409 0.9276941190039866 1.0943059678552358 1.0204367995807646 1.0808076946843002 1.0 23.097618757332807 SEDES(ph)ET(ph)EDEEEKSQEDQEQK ddPTM_KYSE-520_SHP099_60min_R1 3 SEDESETEDEEEKSQEDQEQK 21 1 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 SEDES(1)ET(1)EDEEEKSQEDQEQK;SEDES(1)ET(1)EDEEEKSQEDQEQK;SEDES(1)ET(1)EDEEEKSQEDQEQK 301.09 1.1136e-44 4838100000.0 5343110.0 4809340.0 4440520.0 4910940.0 5013600.0 4706810.0 4938840.0 5282970.0 5782160.0 4795860.0 True False 5046717.037074287 4578292.087433488 4726763.024283214 5377674.261072048 5408141.796518155 4677433.052887481 5438106.145633426 5264644.61012447 4732265.500391896 4753372.411522621 1.0617129482303072 0.963167135050323 0.9944019982160657 1.1313387202812177 1.13774838752552 0.9840241091880249 1.1440521959632166 1.1075598868210865 0.9955595923686601 1.0 22.180520005933783 -5.236544027673539 24.148037508530944 1.0780930549135321 1.0021013153143448 0.1812066443792636 0.06204895340557791 741.848001230176 719576.8159415191 0.016516825648021597 0.028588782280632604 5.80037366824247e-06 5.236544027673539 -0.07599173959918737 SEDES(ph)ET(ph)EDEEEKSQEDQEQKR ddPTM_KYSE-520_SHP099_60min_R1 7 SEDESETEDEEEKSQEDQEQKR 22 2 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 SEDES(1)ET(1)EDEEEKSQEDQEQKR;SEDES(0.997)ET(0.972)EDEEEKS(0.031)QEDQEQKR;S(0.004)EDES(0.98)ET(0.891)EDEEEKS(0.125)QEDQEQKR;S(0.008)EDES(0.992)ET(0.998)EDEEEKS(0.002)QEDQEQKR;S(0.001)EDES(1)ET(0.999)EDEEEKSQEDQEQKR;SEDES(1)ET(0.999)EDEEEKS(0.001)QEDQEQKR;S(0.003)EDES(0.979)ET(0.927)EDEEEKS(0.091)QEDQEQKR 146.57 2.0369e-06 9005890000.0 11536050.0 10262380.0 9388980.0 9909440.0 9676860.0 9311400.0 9038189.0 10030280.0 12766980.0 9400260.0 True False 10896122.309954453 9769359.860653564 9994208.673699163 10851230.198218213 10438373.828198226 9253284.098711556 9951857.348344227 9995487.299764948 10448818.261375219 9316981.009691617 1.1694906642634775 1.048554231299965 1.0726874578045278 1.1646723533009948 1.1203601056329433 0.9931633529236775 1.06814185174277 1.0728246938968258 1.1214811160939637 1.0 23.151431122065773 SEDES(ph)ETEDEEEKS(ph)QEDQEQKR ddPTM_KYSE-520_SHP099_60min_R1 2 SEDESETEDEEEKSQEDQEQKR 22 2 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 2 SEDES(1)ET(0.249)EDEEEKS(0.751)QEDQEQKR;S(0.009)EDES(0.774)ET(0.39)EDEEEKS(0.827)QEDQEQKR 178.15 3.6672000000000005e-10 4449500000.0 3960600.0 3656800.0 3250900.0 3341100.0 3358400.0 3372400.0 3284600.0 3593600.0 4658500.0 3284900.0 True False 3740897.62273964 3481121.8390312945 3460458.2156239096 3658637.1394616547 3622686.9733178867 3351351.600671736 3616639.4226068417 3581134.640352547 3812633.8312284118 3255798.3416135306 1.1489954936477118 1.069206834630334 1.0628601198650873 1.1237296526321352 1.1126877629412795 1.0293486417254119 1.1108302920304587 1.0999251994758938 1.1710288633352275 1.0 21.634579913718316 -10.536179735750622 4.655556681661155 0.9993082549923378 1.0998360907103395 0.3777705378441232 0.0395169079851247 0.00028389691850829704 2.8283822656990777e-05 0.038284852150899946 0.009222045599154424 2.9095127470553915e-11 10.536179735750622 0.10052783571800172 SEDES(ph)ETEDEEEKSQEDQEQK ddPTM_KYSE-520_SHP099_60min_R1 2 SEDESETEDEEEKSQEDQEQK 21 1 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 S(0.001)EDES(0.995)ET(0.004)EDEEEKSQEDQEQK;SEDES(0.978)ET(0.022)EDEEEKSQEDQEQK 129.2 3.5444000000000004e-07 1652460000.0 3126700.0 2902400.0 2544000.0 2481900.0 2872600.0 2939300.0 2875200.0 2653700.0 3398800.0 2445500.0 True False 2953255.7180780796 2762964.34740878 2707990.310543921 2717779.0297895567 3098657.277141787 2920954.7384220287 3165853.275247879 2644494.9340782394 2781663.596775597 2423834.772570213 1.218422869206746 1.1399144771237675 1.1172338730302116 1.1212723988226507 1.2784110997202993 1.2050964741811483 1.3061341107384297 1.0910376251736171 1.1476292147694316 1.0 21.208859926172142 -9.950924408644507 6.727470147332258 0.9999999836988894 1.1804281319732066 0.3912688794483409 0.0675688428666679 1.6803104804574006e-08 2.5842370353292525e-09 0.06863016677707805 0.016645258907425155 1.1196327447772286e-10 9.950924408644507 0.1804281482743172 SEDES(ph)ETEDEEEKSQEDQEQKR ddPTM_KYSE-520_SHP099_60min_R1 2 SEDESETEDEEEKSQEDQEQKR 22 2 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 SEDES(0.986)ET(0.014)EDEEEKSQEDQEQKR;S(0.003)EDES(0.657)ET(0.34)EDEEEKSQEDQEQKR 237.32 4.624100000000001e-27 1463910000.0 428370.0 393690.0 354290.0 295820.0 423220.0 353890.0 316620.0 308340.0 445820.0 299480.0 True False 404607.4621655759 374776.5414592629 377128.10028404236 323934.6438584737 456525.0062075978 351681.24124117015 348627.03951341903 307270.440507097 364870.32620763127 296826.84019191435 1.363109420643954 1.2626100160516143 1.270532341483031 1.0913253115824455 1.5380179430958132 1.1848026984816789 1.1745131918933378 1.0351841508282416 1.2292362980777722 1.0 18.179262026169837 -6.674930094840956 3.0251848836193838 1.1075789572973314 1.2929429116353812 0.3619065951311915 0.12067953598184494 0.3018744503608141 5.558380738902338 0.05015028649636198 0.036273826232530296 2.1138292598598621e-07 6.674930094840956 0.18536395433804986 SEDESET(ph)EDEEEKSQEDQEQKR ddPTM_KYSE-520_SHP099_60min_R1 1 SEDESETEDEEEKSQEDQEQKR 22 2 J3KQ69;A0A499FHX9;P25205;P25205-2;Q7Z6P5 J3KQ69 MCM3 DNA replication licensing factor MCM3 1 S(0.011)EDES(0.437)ET(0.552)EDEEEKSQEDQEQKR 78.202 0.007369 941250000.0 684680.0 617030.0 577170.0 552480.0 636670.0 601520.0 580830.0 567740.0 753720.0 533850.0 True False 646699.4355242588 587386.9526190882 614375.301704651 604987.5330908307 686772.3068432285 597765.6905574852 639545.9647545305 565770.6424515123 616863.4477349953 529120.5043290147 1.2222157906058613 1.1101194299093777 1.161125484040255 1.1433832711851226 1.2979506581664877 1.1297345040814861 1.2086962412570799 1.069266146034114 1.1658279025063463 1.0 19.01323680017793 -8.419220747667703 0.7004298554360985 0.9991261185723946 1.1787022543493992 0.4380483358063596 0.05901676137410188 1.3395283123633275 1.1940979578543518 0.06287348107526182 0.02181185343708428 3.808721805538418e-09 8.419220747667703 0.1795761357770046 SEDIY(ph)ADPAAYVMR ddPTM_KYSE-520_SHP099_60min_R1 1 SEDIYADPAAYVMR 14 0 A0A1B0GUN5;Q5VTI5;Q9Y2H5 A0A1B0GUN5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 SEDIY(1)ADPAAYVMR 155.0 3.1301e-05 74946000.0 333220.0 291280.0 256640.0 244980.0 297180.0 250570.0 241540.0 275380.0 341340.0 261880.0 True False 314735.62234239886 277286.47157980606 273183.4250385187 268262.825544077 320566.3752770992 249006.0996857781 265957.2204032316 274424.77105417533 279361.26048116473 259559.946939557 1.212573920026615 1.0682945302203233 1.0524868272612729 1.0335293588519132 1.2350379134256357 0.9593394613528853 1.0246466126191818 1.057269329455056 1.0762880166030346 1.0 17.985708250648145 -6.29251492361558 24.999837652536787 1.027159151842799 1.1088933164505632 0.331560548852432 0.06770194807741807 988.4181814626078 795165.3409794994 0.024151063910196675 0.021300851997622754 5.099000756311782e-07 6.29251492361558 0.08173416460776428 SEDMPFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 SEDMPFSPK 9 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK;SEDMPFS(1)PK 234.9 3.0724e-13 27234300000.0 47003160.0 40696570.0 36031460.0 35937340.0 39609970.0 39892460.0 37309310.0 39964220.0 47149380.0 38881640.0 True False 44395801.01632351 38741445.69040307 38354105.56397433 39352813.98864477 42727049.289099745 39643476.35978336 41080899.15857626 39825593.44853905 38588241.13114614 38537178.919058144 1.1520251938931638 1.0053005117934024 0.9952494354745495 1.0211648878424586 1.108722809701297 1.0287072762396239 1.0660069136057113 1.0334330266412868 1.0013250116775607 1.0 25.199747628464525 -6.9324019365645295 0.006997665759323517 5.2488992444277475e-08 2.07226282648474 0.1583135874460483 0.045653248286794436 6722.154584589711 33.71799514407 4950.882531971128 5030.631671415317 1.1684175280597217e-07 6.9324019365645295 2.0722627739957478 SEDRRS(ph)S(ph)EER ddPTM_KYSE-520_SHP099_60min_R1 3 SEDRRSSEER 10 2 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 2 S(0.016)EDRRS(0.984)S(1)EER;S(0.003)EDRRS(0.997)S(1)EER;SEDRRS(1)S(1)EER 181.98 1.9608e-06 609010000.0 1987841.0 1340359.0 1297877.0 1649476.0 1496436.0 1972176.0 2171598.0 1427222.0 1625514.0 1917084.0 True False 1877571.497067211 1275966.141720124 1381540.2280966223 1806241.7031069552 1614196.999643858 1959866.9180424567 2391124.3185940976 1422271.2999981204 1330361.6334733095 1900100.1272287846 0.988143451053587 0.6715257387941269 0.7270881193569204 0.9506034325366222 0.8495325991047092 1.0314545480826 1.2584201665632488 0.7485243959603554 0.7001534363421076 1.0 20.85764401380162 -5.271797840559143 24.06203872151524 0.9376665699137979 0.7831797667717293 0.12694243705379282 0.1653208203189939 837.1460274124938 1944636.2105093864 0.049294177010686085 0.07409944826810953 5.348132513181822e-06 5.271797840559143 -0.15448680314206864 SEDRRS(ph)S(ph)EEREAGEI ddPTM_KYSE-520_SHP099_60min_R1 4 SEDRRSSEEREAGEI 15 3 Q9Y383;Q96HJ9-2;A0A0A6YYJ8;Q9Y383-3;Q9Y383-2 Q9Y383 LUC7L2 Putative RNA-binding protein Luc7-like 2 2 S(0.004)EDRRS(0.997)S(0.999)EEREAGEI;S(0.196)EDRRS(0.807)S(0.997)EEREAGEI;S(0.179)EDRRS(0.936)S(0.885)EEREAGEI;SEDRRS(1)S(1)EEREAGEI 115.31 0.0010811 8351370000.0 2871990.0 3106640.0 2922970.0 2583780.0 2748130.0 2598300.0 2398210.0 2754140.0 3778590.0 2543910.0 True False 2712674.9895298756 2957392.3512382945 3111389.3231173554 2829341.6743582133 2964392.196279209 2582083.0459095505 2640644.4710740894 2744586.5311611113 3092493.3065023874 2521372.9365320294 1.075872176712172 1.172929362566245 1.2340059965095254 1.1221432709790933 1.1757055663318579 1.0240781950571038 1.0473042019345657 1.0885285914649725 1.2265116602528041 1.0 21.26577809247622 -6.241344039245734 24.769036106253626 1.0809437921773672 1.1595026574266156 0.24881637149528024 0.06822616209890706 1114.651309282627 1373892.4559291217 0.022822094301376827 0.022793021242966217 5.73661838931189e-07 6.241344039245734 0.07855886524924838 SEDSIAGSGVEHS(ph)TPDTEPGKEESWVSIKK ddPTM_KYSE-520_SHP099_60min_R1 1 SEDSIAGSGVEHSTPDTEPGKEESWVSIKK 30 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SEDSIAGSGVEHS(0.523)T(0.477)PDTEPGKEESWVSIKK 113.78 0.00020024 1326500000.0 495740.0 516700.0 400300.0 554150.0 414080.0 360740.0 315330.0 448770.0 513990.0 377340.0 True False 468240.3139668103 491876.95641748863 426103.97850264545 606816.2493887269 446665.7402070847 358488.4878502913 347206.6337242327 447213.3216137056 420662.37263348536 373997.06116607785 1.2519892870465166 1.3151893624080238 1.139324403176069 1.6225160900910474 1.1943028076595967 0.9585329005863504 0.9283672781857809 1.195766940572603 1.1247745405322456 1.0 18.512667408031586 -6.0012470455706035 24.99378537756281 1.0499608070112634 1.32864938295593 0.5097791264729756 0.13444559712372087 41.31265419746396 828035.4935164783 0.042676744362830046 0.047761779720280756 9.971326900667383e-07 6.0012470455706035 0.27868857594466667 SEDSIAGSGVEHST(ph)PDTEPGKEESWVSIK ddPTM_KYSE-520_SHP099_60min_R1 1 SEDSIAGSGVEHSTPDTEPGKEESWVSIK 29 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SEDSIAGSGVEHS(0.153)T(0.847)PDTEPGKEESWVSIK 129.9 0.0001392 581460000.0 143490.0 199970.0 136000.0 195650.0 145410.0 179230.0 143170.0 175190.0 202520.0 182960.0 True False 135530.3236597766 190363.1410389106 144766.7776076939 214244.51717568265 156852.93973027467 178111.35908800713 157643.02080454867 174582.30677965336 165747.4731137443 181339.1167407259 0.7473860361499082 1.0497632527409242 0.798320738567828 1.1814578179621558 0.8649702422149714 0.9822004335813892 0.8693271680039265 0.9627393687445094 0.9140194134215721 1.0 17.468330637471297 -4.243516797035668 24.32438344445165 0.9539815935058106 0.7473857839499813 0.2752120163254358 0.10238502360730446 3438.812053809285 4667025.156687339 0.023422565682994792 0.6980933546382023 5.707989991781202e-05 4.243516797035668 -0.20659580955582924 SEDSIAGSGVEHST(ph)PDTEPGKEESWVSIKK ddPTM_KYSE-520_SHP099_60min_R1 1 SEDSIAGSGVEHSTPDTEPGKEESWVSIKK 30 2 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 SEDSIAGS(0.002)GVEHS(0.15)T(0.695)PDT(0.116)EPGKEES(0.031)WVS(0.007)IKK 67.947 0.020609 867170000.0 178030.0 256120.0 211930.0 324950.0 284970.0 226930.0 126090.0 186930.0 309520.0 169750.0 True False 168154.3210059937 243815.61075604253 225591.34689998903 355833.1503002199 307395.517742496 225513.64569459058 138836.40771981253 186281.58345978978 253318.97036424105 168246.14706350147 0.9994542159858608 1.449160144297502 1.3408410881162327 2.1149557152468823 1.8270582899379866 1.3403792575973494 0.8251981405993876 1.1071967275986485 1.5056450015977505 1.0 17.36021394107908 -6.5231928189322 24.999849625210388 1.1133494994763016 1.563340157497868 0.2961824302068995 0.31688328695196155 15.08464382431817 1200484.0306941483 0.128426610907551 0.10046564324875605 2.9978312403710905e-07 6.5231928189322 0.44999065802156646 SEDSLLRNS(ph)DEEES(ph)ASESELWK ddPTM_KYSE-520_SHP099_60min_R1 2 SEDSLLRNSDEEESASESELWK 22 1 Q70Z53 Q70Z53 FRA10AC1 Protein FRA10AC1 2 S(0.003)EDS(0.168)LLRNS(0.828)DEEES(0.748)AS(0.159)ES(0.093)ELWK;S(0.005)EDS(0.123)LLRNS(0.872)DEEES(0.987)AS(0.011)ES(0.002)ELWK 82.65 0.00021297 63788000.0 381810.0 347400.0 320240.0 335710.0 360050.0 351440.0 329750.0 349670.0 403100.0 356870.0 True False 360630.23818063526 330710.38254196936 340883.1828021165 367615.77746510814 388383.8865957317 349246.5325999511 363084.34804987075 348457.0763835918 329907.20132406836 353708.4094406586 1.019569307811829 0.9349802654252483 0.9637406793386015 1.0393187372797899 1.0980340761756489 0.9873854374913976 1.0265075366006675 0.985153496730906 0.9327095215117204 1.0 18.432200994052717 -5.242357463121782 24.371234189547096 1.0126836240433468 0.9689850943491953 0.1232024771638014 0.044589755415362746 1174.9240447404084 1500597.0632587501 0.012767207546501291 0.02205908684986623 5.723247627016625e-06 5.242357463121782 -0.043698529694151445 SEEAHAEDSVMDHHFR ddPTM_KYSE-520_SHP099_60min_R1 5 SEEAHAEDSVMDHHFR 16 0 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 0 ;;;; 200.55 7.2462e-13 3285930000.0 1477646.0 2603170.0 2134330.0 4353753.0 2211554.0 1953557.0 1736984.0 1705656.0 1653655.0 1620331.0 False True 1395678.0307657276 2478109.8057621703 2271912.3268487453 4767532.376116434 2385590.717779024 1941364.1261278265 1912575.2940502104 1699739.477439101 1353392.9372501906 1605976.1279384429 0.869052787576195 1.543055194066469 1.4146613310903635 2.9686197031063055 1.485445939250265 1.2088374742032524 1.1909114094400284 1.058384024438159 0.8427229481844865 1.0 20.615019017371935 -6.250922199382352 3.508889648842373 1.0583985543712815 1.7198119562302225 0.26582975044227686 0.5011198844176964 0.35006793031891364 9.29908302473725 0.18922992827132018 0.17796031430278925 5.611484925964458e-07 6.250922199382352 0.661413401858941 SEEDNEIES(ph)EEEVQPK ddPTM_KYSE-520_SHP099_60min_R1 1 SEEDNEIESEEEVQPK 16 0 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1;C9J7Y7 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 SEEDNEIES(1)EEEVQPK 298.84 5.6979999999999995e-28 0.0 336420.0 297200.0 256180.0 282570.0 304750.0 333440.0 292590.0 348650.0 334230.0 306710.0 True False 317758.1119633569 282922.0658937055 272693.7727024927 309425.3678422317 328732.0912096909 331358.87727671186 322167.8526032191 347440.61452552147 273542.25725265 303992.78801676945 1.0452817451242564 0.9306867697075051 0.8970402702035478 1.0178707523323303 1.0813812174766355 1.0900221661128118 1.0597878150498987 1.14292387260962 0.8998314040185726 1.0 18.213677571737705 -5.491740656041557 7.069494873164813 1.0553060659213058 0.9550068111821528 0.23348079514115738 0.06994258957186354 0.2605327041748595 45.54571678042305 0.019426013083602863 0.028067965333375623 3.222992864093625e-06 5.491740656041557 -0.10029925473915302 SEEEQS(ph)SSSVKKDETNVK ddPTM_KYSE-520_SHP099_60min_R1 1 SEEEQSSSSVKKDETNVK 18 2 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SEEEQS(0.318)S(0.318)S(0.216)S(0.149)VKKDETNVK 73.279 0.012194 0.0 163760.0 133430.0 121790.0 103560.0 118740.0 132910.0 120000.0 129970.0 129340.0 102790.0 True False 154675.90635253352 127019.82251748696 129640.77827088983 113402.31126355064 128084.16246181703 132080.45938953885 132130.77108714008 129519.16440522618 105855.11639606782 101879.36056941 1.5182261204628729 1.246766978194262 1.2724930500772635 1.113103877269529 1.2572140396832763 1.2964398152023437 1.296933651218982 1.2712993454349892 1.0390241537092213 1.0 16.636502284330028 -11.126010026093889 0.04149126926831414 5.500709884420876e-11 2.0252383470462956 0.5066865178739768 0.09921105929435464 416.4483281507036 2.3230409733721857 79.4197641404043 39.368522289584696 7.481522285185692e-12 11.126010026093889 2.0252383469912885 SEEEQSSSS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 2 SEEEQSSSSVK 11 0 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SEEEQS(0.003)S(0.021)S(0.13)S(0.846)VK;SEEEQSSS(0.001)S(0.999)VK 246.25 2e-14 57393000.0 308680.0 219390.0 195072.0 286850.0 259460.0 292050.0 343450.0 310370.0 283550.0 290450.0 True False 291556.90506167564 208850.17508889613 207646.65324623548 314112.13775540254 279878.0258745415 290227.20761955285 378169.27774898557 309293.3989109026 232064.46771381676 287876.83896668046 1.0127834740307855 0.7254844670330319 0.7213037839083296 1.091133760127742 0.9722144611534214 1.0081644937512477 1.3136495423056795 1.0743948697682517 0.8061241347056629 1.0 18.135092196467564 -5.2684266887249125 24.611930159193218 1.0485611379186681 0.8104199614048799 0.333576829213062 0.14051797204562674 472.9242029640406 1665817.6052677613 0.040646903741523605 0.06180630153728444 5.38980820594026e-06 5.2684266887249125 -0.2381411765137882 SEEEQSSSS(ph)VKK ddPTM_KYSE-520_SHP099_60min_R1 2 SEEEQSSSSVKK 12 1 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SEEEQSS(0.001)S(0.039)S(0.96)VKK;SEEEQSS(0.01)S(0.215)S(0.775)VKK 190.19 5.4956e-08 286750000.0 279180.0 201177.0 170488.0 251510.0 238330.0 196382.0 285710.0 299710.0 219080.0 224360.0 True False 263693.3288684674 191512.15494716662 181477.92927044496 275413.4347807614 257085.21508779583 195156.30709379585 314592.35506088997 298670.3759628397 179300.59455737277 222372.34494943864 1.1858188972573187 0.8612228961776305 0.8160993639371301 1.238523768966788 1.156102460250846 0.8776105101476042 1.4147098872947517 1.3431093512583552 0.8063079723251594 1.0 17.76261785474141 -5.266528655059486 24.976160697400484 1.137526000478192 0.9450646377161618 0.1183664109675383 0.2018514353913769 777.6982819036859 3816637.062471082 0.056782191807626815 0.08715907290542413 5.413415286043765e-06 5.266528655059486 -0.19246136276203019 SEEEQSSSS(ph)VKKDETNVK ddPTM_KYSE-520_SHP099_60min_R1 6 SEEEQSSSSVKKDETNVK 18 2 P07910;G3V2Q1;P07910-3;G3V5V7;P07910-2;G3V2D6;G3V4C1;B2R5W2;P07910-4;G3V4W0;B4DY08 P07910;P07910-2;B4DY08 HNRNPC Heterogeneous nuclear ribonucleoproteins C1/C2 1 SEEEQSS(0.001)S(0.068)S(0.931)VKKDETNVK;SEEEQS(0.004)S(0.038)S(0.172)S(0.787)VKKDETNVK;SEEEQS(0.057)S(0.057)S(0.15)S(0.736)VKKDETNVK;SEEEQSSS(0.022)S(0.978)VKKDETNVK;SEEEQSS(0.001)S(0.026)S(0.973)VKKDETNVK;SEEEQS(0.003)S(0.063)S(0.21)S(0.723)VKKDETNVK 243.24 6.8596e-24 12126100000.0 8705250.0 7777050.0 7246630.0 7833980.0 7743910.0 7400820.0 7390640.0 8136120.0 9305790.0 6982980.0 True False 8222352.429014366 7403428.844409965 7713759.364817952 8578519.103828028 8353311.660179302 7354628.737185211 8137758.016895507 8107897.698704692 7616093.115875722 6921116.229876238 1.1880095863035949 1.069687113828798 1.114525332130694 1.2394704580739901 1.206931278530006 1.0626362125573963 1.1757869318488565 1.1714725528962364 1.1004139885701516 1.0 22.722573302191936 -8.073039555332018 3.8609418182968662 1.000079835592999 1.1515128901332286 0.4307993966497464 0.05397922847818448 0.32267945522475494 12.053374017324783 0.05400401726510669 0.014209542314497744 8.452018610765107e-09 8.073039555332018 0.1514330545402296 SEEIKDTILQTVDLVSQETGEK ddPTM_KYSE-520_SHP099_60min_R1 2 SEEIKDTILQTVDLVSQETGEK 22 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 0 ; 226.16 7.8025e-20 267140000.0 318520.0 295920.0 191693.0 375860.0 258440.0 207351.0 231150.0 319930.0 247310.0 173863.0 False True 300851.060646122 281703.55901502434 204049.83749964464 411581.62139357 278777.7576775472 206056.84549605186 254516.8978066039 318820.23750222346 202404.73817776077 172322.7090833672 1.7458584666317811 1.6347442569437571 1.1841146102277693 2.3884351840966755 1.617765639598195 1.1957614094632447 1.4769782761683043 1.8501347802510633 1.1745679908028857 1.0 17.39475331020233 -6.011367535581311 24.90388133915654 1.4018314934099987 1.7302822634103467 0.22181795814841698 0.3468485988644802 989.1664990210911 2167058.7980298917 0.11163069932822536 0.11824439773375801 9.741648706268708e-07 6.011367535581311 0.32845077000034806 SEEKIS(ph)DSEGFK ddPTM_KYSE-520_SHP099_60min_R1 6 SEEKISDSEGFK 12 1 P23246;P23246-2 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 SEEKIS(0.968)DS(0.032)EGFK;SEEKIS(0.994)DS(0.006)EGFK;SEEKIS(1)DSEGFK;SEEKIS(1)DSEGFK;SEEKIS(0.999)DS(0.001)EGFK;SEEKIS(1)DSEGFK 164.01 2.0944e-06 4693380000.0 10434700.0 9441990.0 9079720.0 8825690.0 9356050.0 8894620.0 8871810.0 9291180.0 10984350.0 9335060.0 True False 9855866.389941266 8988382.627684068 9665013.279265657 9664480.924059542 10092317.906357454 8839105.37728824 9768659.135321677 9258951.065157725 8989868.932929872 9252358.630966786 1.0652274498909495 0.9714693286532133 1.0445999409186058 1.0445424036756876 1.090783259587388 0.9553353614833491 1.055802041938461 1.0007125139063324 0.9716299693401004 1.0 23.141389756730376 -7.480936024504673 7.184393355696712 0.9858025582414958 1.0303188823041889 0.19662991118166362 0.03926762231100122 0.36749050472598704 53.954434542612965 0.0217114790654865 0.01002988123099397 3.304182110354333e-08 7.480936024504673 0.044516324062693124 SEEKT(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 3 SEEKTPIK 8 1 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 S(0.001)EEKT(0.999)PIK;SEEKT(1)PIK;SEEKT(1)PIK 131.42 0.0025461 2773070000.0 8954200.0 7537320.0 6321950.0 6398840.0 6859310.0 8224830.0 7416120.0 7762360.0 8049460.0 8375180.0 True False 8457492.676244838 7175215.833452028 6729473.012477641 7006983.829718602 7399098.672864789 8173495.785124212 8165813.783956357 7735434.184908439 6587880.974373698 8300982.420991448 1.0188544255746896 0.8643815237227113 0.8106839252496442 0.8441150064357932 0.8913521674439422 0.9846419821893793 0.9837165494179005 0.9318697224737092 0.7936266625157916 1.0 22.984850658798003 -6.021998305485886 22.39017104392698 0.937396983082342 0.8765398258007523 0.10995566787455802 0.07401812193348636 445.6789108752409 453617.82621441287 0.02509611265519199 0.02536871406185373 9.506085026980699e-07 6.021998305485886 -0.06085715728158969 SEEKT(ph)PIKKPGDGR ddPTM_KYSE-520_SHP099_60min_R1 4 SEEKTPIKKPGDGR 14 3 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 S(0.037)EEKT(0.963)PIKKPGDGR;S(0.001)EEKT(0.999)PIKKPGDGR;S(0.041)EEKT(0.959)PIKKPGDGR;S(0.001)EEKT(0.999)PIKKPGDGR 97.50200000000001 0.0010804 39131500000.0 19955100.0 16232600.0 15325700.0 15121800.0 16517500.0 16687200.0 16400300.0 16039100.0 18519800.0 15306700.0 True False 18848150.823494356 15452761.530370673 16313619.143987007 16558971.325465059 17817333.2782808 16583048.99499746 18058202.375503544 15983464.10565409 15157071.166165903 15171094.546432415 1.2423725108170673 1.018566029173188 1.0753093057364977 1.0914816511613536 1.1744263555770051 1.093068726468195 1.1903031993001487 1.0535471950778073 0.999075651382727 1.0 23.85482183943032 -7.507060427202518 5.512628398239806 1.0061759255687577 1.1200081472617789 0.41795179390041515 0.06069257597797445 0.1706257640124702 17.47999024638641 0.03732145180054801 0.015618561398050245 3.11128340682385e-08 7.507060427202518 0.11383222169302121 SEENTKEEKPDSK ddPTM_KYSE-520_SHP099_60min_R1 7 SEENTKEEKPDSK 13 2 P50502;F6VDH7;Q3KNR6;Q8IZP2;Q8NFI4 P50502 ST13;ST13P4;ST13P5 Hsc70-interacting protein;Putative protein FAM10A4;Putative protein FAM10A5 0 ;;;;;; 123.38 5.3952e-05 7577060000.0 8010620.0 7794640.0 5137240.0 4581090.0 7579700.0 7828640.0 5128050.0 6797750.0 7024670.0 5923940.0 False True 7566254.939824937 7420173.794406831 5468394.710274616 5016475.416245064 8176179.267406395 7779778.553873445 5646443.338945076 6774170.19185678 5749167.005520074 5871458.500355583 1.2886499903502198 1.2637701167363198 0.931352015848097 0.8543831853603768 1.39252951662883 1.3250163572479123 0.9616764452313034 1.1537457330996257 0.9791718710388394 1.0 22.485287490013 -1.0000130790219326 0.018444272652386986 0.0015295114250789771 2.5205034447072374 0.09497988325943474 0.17327386847452467 11364.363296179868 16.200142485034057 839.9611792728565 1449.0394259268273 0.0999969884892536 1.0000130790219326 2.5189739332821586 SEEPAGQILSHLS(ph)SELK ddPTM_KYSE-520_SHP099_60min_R1 2 SEEPAGQILSHLSSELK 17 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SEEPAGQILSHLS(0.845)S(0.155)ELK;SEEPAGQILSHLS(0.995)S(0.005)ELK 207.67 5.7869e-15 665220000.0 636270.0 658810.0 555400.0 600840.0 515490.0 625120.0 532830.0 642140.0 846240.0 661780.0 True False 600974.834727201 627159.7787060294 591201.9726714196 657943.6529508673 556056.1302631124 621218.3942035094 586693.6563196734 639912.566216602 692584.1479743978 655917.1440570488 0.9162358998729432 0.9561570152395372 0.90133636241714 1.0030895806157527 0.8477536153785135 0.9470988825830698 0.8944630608231904 0.9755996958069222 1.0559018837204837 1.0 19.32315405847588 -7.523451198381522 4.871047878783092 1.026289594280802 0.9254477151604449 0.5123643122317907 0.04088638150079052 0.13732227205390632 9.32948843662399 0.02543811580387284 0.010001675977390809 2.9960482390919357e-08 7.523451198381522 -0.10084187912035703 SEEVPAFGVAS(ph)PPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK ddPTM_KYSE-520_SHP099_60min_R1 4 SEEVPAFGVASPPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK 44 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 1 SEEVPAFGVAS(1)PPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK;SEEVPAFGVAS(1)PPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK;SEEVPAFGVAS(1)PPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK;SEEVPAFGVAS(1)PPPLTDTPDTTANAEGDLPTTMGGPLPPHLALK 274.42 1.3699e-42 1571220000.0 975522.0 1417031.0 883148.0 870955.0 885174.0 1295831.0 902737.0 1206431.0 1257557.0 1257850.0 True False 921407.8500051049 1348954.703753106 940077.1331667602 953730.3013378319 954832.1578488827 1287743.2380648952 993994.4658240975 1202246.1724441124 1029216.3492321796 1246706.4275924924 0.739073634026601 1.0820147180584163 0.754048517245666 0.7649999071389846 0.7658837210719717 1.0329161778299714 0.7972963352275279 0.9643378311329982 0.8255482818193962 1.0 20.24969035099596 -6.233908826182881 24.991994713609525 0.9138706779821526 0.8288402663420453 0.16325710292795947 0.11459307976293986 1683.0747286173882 1527881.2683107082 0.037351907086254015 0.037344321320573456 5.835676029551551e-07 6.233908826182881 -0.08503041164010727 SEFS(ph)DVDKLAFK ddPTM_KYSE-520_SHP099_60min_R1 1 SEFSDVDKLAFK 12 1 A6NF31;O75665-3;O75665 A6NF31 OFD1 Oral-facial-digital syndrome 1 protein 1 S(0.005)EFS(0.995)DVDKLAFK 103.39 0.00065668 119470000.0 234620.0 196040.0 181320.0 188040.0 184240.0 187660.0 189280.0 167590.0 188610.0 186730.0 True False 221605.1608966252 186621.944137961 193008.1773222576 205911.26506371237 198738.63981779665 186488.74433105736 208414.26959478264 167008.6694058002 154363.17847117948 185075.7174737415 1.197375668302172 1.008354562582954 1.0428606191930152 1.112578505026879 1.0738234195741732 1.0076348581899532 1.1261027240072832 0.9023802348868125 0.8340541945654242 1.0 17.49775609585661 -7.272564076365896 24.21414918590183 0.9011628708790448 1.0750555005604063 0.5785671687382925 0.06578939388228024 328.83967486448694 715750.5484538897 0.0338059109531202 0.016501348390607382 5.338704998236018e-08 7.272564076365896 0.17389262968136154 SEGDNYSATLLEPAASSLS(ph)PDHK ddPTM_KYSE-520_SHP099_60min_R1 5 SEGDNYSATLLEPAASSLSPDHK 23 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 SEGDNYSATLLEPAAS(0.005)S(0.099)LS(0.896)PDHK;SEGDNYSATLLEPAAS(0.001)S(0.014)LS(0.985)PDHK;SEGDNYSATLLEPAASSLS(1)PDHK;SEGDNYSATLLEPAAS(0.038)S(0.219)LS(0.743)PDHK;SEGDNYSATLLEPAAS(0.074)S(0.054)LS(0.872)PDHK 280.7 5.4043e-39 6404790000.0 2122490.0 2667810.0 2084560.0 2474440.0 1997470.0 2304530.0 2048454.0 2388900.0 3030800.0 2439020.0 True False 2004751.2486210854 2539644.4031355483 2218934.073013926 2709610.033632485 2154659.5249503576 2290146.573448002 2255531.7213044716 2380613.4634734537 2480483.1202505226 2417412.180328849 0.8292964124754151 1.0505632526390563 0.9178964559995213 1.1208721688760117 0.8913082934236114 0.9473546100592848 0.9330356402016821 0.9847776406709471 1.0260902714211915 1.0 21.20503204979967 -4.243900714495088 24.18346475844113 0.9815918670037719 0.8292962153257358 0.341300893464066 0.06497945888239183 2745.042456729111 3784954.080775742 0.015573452999798905 0.4416862192447982 5.702946343306922e-05 4.243900714495088 -0.15229565167803605 SEGFDTYR ddPTM_KYSE-520_SHP099_60min_R1 1 SEGFDTYR 8 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 98.29899999999999 0.022709 651780000.0 2799000.0 2303000.0 2735000.0 2184600.0 1715000.0 2152400.0 2284600.0 2454500.0 3115400.0 1218600.0 False True 2643733.8903318336 2192360.423126524 2911302.4761547204 2392223.727176059 1849960.7429848106 2138966.0732077565 2515549.6635473347 2445985.9123846064 2549721.8928429713 1207804.152056454 2.1888763056746496 1.8151621845261305 2.4104093955943307 1.980638767554298 1.531672779759033 1.7709543965102872 2.0827463287522754 2.025151104357421 2.1110391850381673 1.0 20.203955106964298 -10.866166478586218 2.64908261714795 0.5661963989314647 1.9813731287723497 0.6246910578943337 0.23027572240195537 6942515.0699674925 5144416.454826718 19045733.18123364 0.061068069724407155 1.3609228983777808e-11 10.866166478586218 1.415176729840885 SEGRIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 SEGRISPK 8 1 O60353-2;O60353 O60353-2 FZD6 Frizzled-6 1 SEGRIS(1)PK;S(0.009)EGRIS(0.991)PK;SEGRIS(1)PK 114.39 0.00161 3352230000.0 3320200.0 3694450.0 3261980.0 3993700.0 4330900.0 3833900.0 3519100.0 4402200.0 5958900.0 3487430.0 True False 3136021.8873453927 3516963.076517492 3472252.4501525317 4373260.047250307 4671717.1905497955 3809971.207987001 3874844.971106293 4386929.795681203 4876913.971644724 3456534.083379488 0.9072735323006775 1.0174825393530973 1.0045474357821682 1.2652153694299832 1.3515611528361413 1.1022518847150942 1.121020327772327 1.2691701252926912 1.4109260473070517 1.0 21.720894720827832 -5.205624447843014 5.455667544115197 1.2251498460135024 0.9763337329600033 0.46896108379588197 0.1173184858209006 0.19011345150851888 12.430747578136817 0.03252764184135049 0.056760795461660546 6.2283864635244244e-06 5.205624447843014 -0.24881611305349915 SEGS(ph)PVLPHEPAK ddPTM_KYSE-520_SHP099_60min_R1 2 SEGSPVLPHEPAK 13 0 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4;Q9UKE5-5;Q9UKE5-8;Q9UKE5-3;Q9UKE5-7 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 1 SEGS(1)PVLPHEPAK;S(0.188)EGS(0.812)PVLPHEPAK 180.3 1.71e-07 599310000.0 1534830.0 1264900.0 1266400.0 1411370.0 1429560.0 1494950.0 1362770.0 1484060.0 1579890.0 1367380.0 True False 1449689.9202922508 1204132.305346392 1348034.1703116423 1545506.1804561378 1542058.2389162479 1485619.4625264525 1500532.0909535165 1478912.1422422077 1293021.8017858658 1355266.0770055428 1.0696718119701907 0.8884840591649129 0.9946638473310869 1.1403710361222426 1.1378269293978212 1.0961828734095707 1.107186342529091 1.091233793374258 0.9540722841988301 1.0 20.37014469049141 -5.102800583299066 6.3361594835061545 1.0834879901338976 0.9702295659685116 0.2629126333701346 0.06878020168080227 0.26010206794623325 13.531059554238116 0.018459676580435104 0.03248354022496774 7.892224247879888e-06 5.102800583299066 -0.113258424165386 SEIDLFNIR ddPTM_KYSE-520_SHP099_60min_R1 6 SEIDLFNIR 9 0 P08758;D6RBE9;D6RBL5 P08758 ANXA5 Annexin A5;Annexin 0 ;;;;; 189.0 3.9826e-05 606478000.0 759916.0 845634.0 583503.0 504980.0 774598.0 874028.0 657593.0 648884.0 659176.0 750698.0 False True 717761.9446250108 805008.473317489 621116.53701781 552973.1473722265 835554.4557402596 868572.867047775 724068.9179292154 646633.1728546644 539486.2548747059 744047.3997542061 0.9646723378942275 1.0819317070168128 0.8347808717871927 0.7431961291107254 1.1229855194928209 1.1673622773692987 0.9731489125133822 0.8690752404595161 0.7250697402516609 1.0 19.505035006001428 -5.776373718954081 24.99579529029237 0.9791255036721183 0.9136038981365647 0.05465776625385754 0.14122670268561405 983.2310335131698 1645639.9787276224 0.04883391890044541 0.05559861063761744 1.673502174662427e-06 5.776373718954081 -0.06552160553555353 SEIDLLDIR ddPTM_KYSE-520_SHP099_60min_R1 4 SEIDLLDIR 9 0 P12429;D6RA82 P12429 ANXA3 Annexin A3;Annexin 0 ;;; 151.97 0.0018809 357939000.0 816190.0 1015960.0 799840.0 531365.0 863900.0 983580.0 734070.0 750550.0 824740.0 902180.0 False True 770914.3136655734 967151.7566129494 851398.9661892487 581865.7698392879 931884.0150813864 977441.112379525 808276.9594328074 747946.5172296877 674988.0060035036 894187.3870854187 0.8621395524022646 1.0815985223917732 0.9521482616349155 0.650720171457422 1.0421574141398247 1.0931054569730285 0.903923462919071 0.8364538887845427 0.7548619179293168 1.0 19.77021767059957 -7.002755225043252 24.989245889139927 0.851432458165787 0.9487192199694275 0.07196132888127849 0.13235133619422532 277.731251777621 2518961.9816579716 0.05850698950033984 0.03866634541430012 9.936759414552455e-08 7.002755225043252 0.09728676180364049 SELCS(ph)SPLGK ddPTM_KYSE-520_SHP099_60min_R1 1 SELCSSPLGK 10 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 SELCS(0.678)S(0.322)PLGK 114.86 0.00060646 863320000.0 2744600.0 2754400.0 2474200.0 2333900.0 2598800.0 2702700.0 2640500.0 2548500.0 3250700.0 2657000.0 True False 2592351.566775547 2622074.4895613133 2633690.8908599676 2555713.154287377 2803310.774850682 2685831.446784338 2907427.508796615 2539659.84832437 2660454.823478417 2633461.0471147234 0.9843895620236278 0.9956762005020406 1.0000872782020056 0.9704769155736976 1.064496768585983 1.0198865290705525 1.1040328513619198 0.9643810190801478 1.0102503040222557 1.0 21.32852868932486 -5.745570020624631 24.984382869649796 1.0288721482170564 0.9891180975126254 0.22430313654100786 0.035877089667699744 385.01054806781696 606149.1191215198 0.010703149445251633 0.013771917253210102 1.7965114080790281e-06 5.745570020624631 -0.039754050704431054 SELCSS(ph)PLGK ddPTM_KYSE-520_SHP099_60min_R1 5 SELCSSPLGK 10 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 SELCS(0.181)S(0.819)PLGK;SELCS(0.249)S(0.751)PLGK;SELCS(0.065)S(0.935)PLGK;SELCS(0.205)S(0.795)PLGK;SELCS(0.123)S(0.877)PLGK 203.03 8.757600000000001e-07 5524580000.0 18204800.0 17403900.0 14864700.0 14192500.0 15548100.0 16456100.0 15351600.0 15869000.0 18947200.0 15681200.0 True False 17194943.4536309 16567790.52021351 15822902.346360905 15541350.93286927 16771647.013412317 16353391.37581966 16903489.54517785 15813954.142852463 15506866.100043144 15542276.767788999 1.1063336286268568 1.0659822088968243 1.0180556287064386 0.9999404311907734 1.079098465687547 1.0521876312041796 1.087581298269629 1.017479895585601 0.997721655052544 1.0 23.889694521947014 -6.790928633301859 0.008332581169810341 3.8476698445604036e-07 2.078496292759598 0.2946370508514654 0.032460224607814045 3451.244906695625 17.896436551655643 2203.7312984491414 2258.2361380535 1.6183459551782754e-07 6.790928633301859 2.0784959079926133 SELDTEKVPLS(ph)PLPGPK ddPTM_KYSE-520_SHP099_60min_R1 4 SELDTEKVPLSPLPGPK 17 1 Q8NHU6;Q8NHU6-2 Q8NHU6 TDRD7 Tudor domain-containing protein 7 1 SELDTEKVPLS(1)PLPGPK;SELDTEKVPLS(1)PLPGPK;SELDTEKVPLS(1)PLPGPK;SELDTEKVPLS(1)PLPGPK 209.75 4.4266e-18 5325080000.0 9075950.0 10042640.0 7928220.0 6834310.0 7393990.0 9421630.0 7567790.0 9983400.0 11463440.0 10368510.0 True False 8572488.961042233 9560176.50009005 8439285.746800514 7483840.767589765 7975854.946951748 9362826.112393795 8332816.067712899 9948769.915543068 9381968.265805941 10276653.067978723 0.8341712914055125 0.9302811369470902 0.8212095602503788 0.728237171974682 0.7761140610851125 0.9110773761126233 0.8108492144857284 0.9680943639658992 0.9129400597398241 1.0 23.29286714387553 -7.38646931962825 1.1750522774667276 0.9826485825527382 0.8252623547016604 0.47659879020695417 0.060424192635687546 0.46100223747127766 1.1202908035556074 0.05734994693508282 0.02093366960459884 4.107056528085891e-08 7.38646931962825 -0.1573862278510778 SELISEGRPVET(ph)DS(ph)ESEFPVFPTALTSER ddPTM_KYSE-520_SHP099_60min_R1 5 SELISEGRPVETDSESEFPVFPTALTSER 29 1 Q5T5U3;A0A087WW76;A0A452Q6Z5 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 2 SELISEGRPVET(1)DS(0.998)ES(0.002)EFPVFPTALTSER;SELISEGRPVET(0.999)DS(0.866)ES(0.134)EFPVFPTALTSER;SELISEGRPVET(1)DS(0.997)ES(0.003)EFPVFPTALTSER;S(0.005)ELIS(0.01)EGRPVET(0.98)DS(0.828)ES(0.176)EFPVFPTALTSER;SELISEGRPVET(1)DS(0.958)ES(0.042)EFPVFPTALTSER 186.05 2.5891e-15 1671130000.0 694069.0 677785.0 568396.0 655691.0 630908.0 629675.0 600894.0 732728.0 841707.0 643020.0 True False 655567.6089777509 645223.1912239741 605035.7156257557 718007.6754993115 680556.8702245246 625744.9647589182 661638.2296802995 730186.3375880002 688874.2265067672 637323.3430619905 1.0286263889662455 1.0123953535485288 0.9493387025789605 1.1265987403657254 1.0678360954971784 0.9818328036637658 1.0381515707576148 1.1457078193305361 1.0808865452771632 1.0 19.281665977338175 -5.254704230155397 24.99736026285609 1.0648570424055388 0.9983476731006837 0.2612787737060708 0.050934633676696206 788.8661851819459 2927847.4402516275 0.014667260946976969 0.02464761537006722 5.562829766029358e-06 5.254704230155397 -0.06650936930485507 SELLT(ph)T(ph)VS(ph)LASMQEESLLPEGEDTFLSESDSEEER ddPTM_KYSE-520_SHP099_60min_R1 1 SELLTTVSLASMQEESLLPEGEDTFLSESDSEEER 35 0 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 3 S(0.293)ELLT(0.374)T(0.386)VS(0.396)LAS(0.392)MQEES(0.36)LLPEGEDT(0.294)FLS(0.266)ES(0.125)DS(0.114)EEER 53.601000000000006 0.029324 1349800000.0 323960.0 350150.0 287420.0 252040.0 352280.0 387100.0 389150.0 441750.0 300850.0 339030.0 True False 305989.2930017505 333328.26841413515 305947.5530882601 275993.80582141096 380002.4318009841 384683.96531254554 428489.0797380046 440217.6723552254 246223.22381132684 336026.4579613488 0.9106107145793462 0.9919703062562888 0.9104864984276074 0.8213454604016834 1.1308705692594407 1.144802607647025 1.275164706784164 1.310068483969977 0.7327495141458429 1.0 18.35821530644933 -5.777056172245981 24.729263843375485 1.125550234702389 0.9146925638294388 0.2546701066525412 0.15543667934089192 267.320168009991 423300.93092985323 0.04813365463573948 0.05477072773208567 1.6708744871282328e-06 5.777056172245981 -0.21085767087295015 SELLTTVSLASMQEES(ph)LLPEGEDT(ph)FLS(ph)ESDSEEER ddPTM_KYSE-520_SHP099_60min_R1 1 SELLTTVSLASMQEESLLPEGEDTFLSESDSEEER 35 0 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 3 S(0.218)ELLT(0.282)T(0.294)VS(0.311)LAS(0.325)MQEES(0.334)LLPEGEDT(0.322)FLS(0.316)ES(0.316)DS(0.282)EEER 50.321999999999996 0.043795999999999995 184550000.0 61512.0 63958.0 56247.0 47310.0 40907.0 52788.0 58498.0 79570.0 61836.0 65431.0 True False 58099.80673886807 60885.361677084795 59872.771618382 51806.328175729825 44126.14817100847 52458.53051128564 64411.54872546267 79293.99024177763 50608.141158707745 64851.33224454773 0.8958922620090464 0.9388451951533137 0.9232311742279697 0.7988475545941519 0.6804200722448274 0.8089044387472241 0.9932185892893197 1.2227041064132362 0.7803716501593156 1.0 15.984848591695815 -6.81945575264072 6.171360869566589 1.0201915401446295 0.840100345101219 0.2843789345900567 0.1213478683884138 0.25264108622169257 19.367626132366468 0.05243087540950916 0.03545909537511433 1.515459195832441e-07 6.81945575264072 -0.18009119504341053 SELNEIKENQRS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 10 SELNEIKENQRSPVR 15 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR;SELNEIKENQRS(1)PVR 190.37 2.8778000000000002e-11 33298010000.0 13996660.0 15237660.0 15647920.0 9935460.0 12014160.0 10936780.0 8340020.0 8897260.0 18138600.0 10140200.0 True False 13220237.368150027 14505619.941406028 16656609.960757243 10879723.131195026 12959606.040780395 10868519.499227453 9183110.612351414 8866397.481696095 14845087.476895913 10050365.716956222 1.3153986372700683 1.4432927467438559 1.657313816218196 1.08252012290852 1.2894661155380567 1.0814053742234377 0.9137090998448304 0.8821965022364684 1.477069381848503 1.0 23.26074466396792 -5.279144404652793 24.754051563805906 1.0977448436813766 1.4691308295158487 0.4623985926397357 0.18186293638501835 619.4824201818831 866119.7498207691 0.05203610884142055 0.07737969227991198 5.258423926198251e-06 5.279144404652793 0.37138598583447213 SELNLR ddPTM_KYSE-520_SHP099_60min_R1 3 SELNLR 6 0 P06744-2;P06744;A0A2U3TZU2;A0A0J9YXP8;A0A2R8Y6C7;K7ERC6;A0A0J9YYH3;A0A0J9YX90;K7EP41;K7EPY4;K7ERK8;A0A2R8YF08;K7ELR7;A0A0J9YYI8;K7EIL4;A0A0J9YXM3;A0A0J9YXH9;K7ENA0 P06744-2 GPI Glucose-6-phosphate isomerase 0 ;; 135.82 0.052542 1008610000.0 1151510.0 1256410.0 914930.0 777490.0 1151530.0 1208290.0 951990.0 1099740.0 1095820.0 1037310.0 False True 1087633.4448217251 1196050.1776901404 973907.851739758 851382.4158391086 1242148.8596905528 1200748.6139175834 1048226.4397270551 1095925.2586212452 896846.7113742004 1028120.240414968 1.057885451591476 1.1633368653528238 0.9472703808911214 0.828096152931952 1.2081746967545341 1.1679067940856211 1.0195562722352125 1.0659504749939654 0.8723169490488941 1.0 19.971577569367806 -7.744414807750775 24.99028040462415 0.9361584760502 1.0569624342443504 0.16297513817265996 0.10978788247555406 403.9434610590085 592951.5041204244 0.07885447553284985 0.029640161491950617 1.80129644642716e-08 7.744414807750775 0.12080395819415046 SELVAMLEEEELRK ddPTM_KYSE-520_SHP099_60min_R1 2 SELVAMLEEEELRK 14 1 B4DZG7;F8VYN9;P40616-2;P40616 B4DZG7 ARL1 ADP-ribosylation factor-like protein 1 0 ; 274.28 1.0152e-24 199690000.0 193337.0 149637.0 100917.0 108125.0 153685.0 159002.0 115445.0 123211.0 108231.0 115807.0 False True 182612.21120224573 142448.213910284 107422.27129290909 118401.16749103324 165779.1351519651 158009.60953920268 127115.307234624 122783.60979866372 88578.97868148163 114781.04007648266 1.59096146088731 1.2410430661315293 0.9358886382396416 1.0315394198566101 1.4443076577934877 1.3766176838432138 1.1074590990804978 1.0697203102258759 0.7717213454631386 1.0 16.80852482684525 -7.323653618760144 2.1785679312666395 0.8982583019222422 1.2469268919653882 0.370632730602525 0.1900600579679403 0.4010362320363732 3.564058054513128 0.14876420956209435 0.05845363292155707 4.746203783992896e-08 7.323653618760144 0.348668590043146 SEMIEKPLFDFSLITTGIQEPQTDETRNS(ph)PTQK ddPTM_KYSE-520_SHP099_60min_R1 1 SEMIEKPLFDFSLITTGIQEPQTDETRNSPTQK 33 2 H3BSS6;Q9H2Y7;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 1 SEMIEKPLFDFSLITTGIQEPQT(0.016)DET(0.057)RNS(0.726)PT(0.201)QK 108.33 0.00025227 238350000.0 98010.0 139870.0 89966.0 89725.0 81566.0 111420.0 85504.0 100120.0 126230.0 83573.0 True False 92573.18992190892 133150.43525084972 95765.35231068952 98252.43702319515 87984.78015294395 110724.5864508494 94147.57875862368 99772.70708818374 103309.81399934784 82832.60823881015 1.1175935647832824 1.6074639937326494 1.1561310738229282 1.1861565042106237 1.0621998029964221 1.336727030635392 1.136600437441158 1.2045100258165784 1.2472118914993113 1.0 16.33791119659153 -13.999999970802351 0.06150889905810831 0.23859986975360392 1.5510286765394758 0.18086765312770525 0.145539553226506 646.7679348066938 2.8938835900229387 75.04765682238616 11.94631611618743 1.000000067230073e-14 13.999999970802351 1.312428806785872 SEMT(ph)PEELQKR ddPTM_KYSE-520_SHP099_60min_R1 1 SEMTPEELQKR 11 1 P62316;K7ERG4 P62316 SNRPD2 Small nuclear ribonucleoprotein Sm D2 1 S(0.004)EMT(0.996)PEELQKR 78.548 0.011934 0.0 258050.0 212530.0 193640.0 180760.0 181300.0 155880.0 140780.0 146040.0 222930.0 187640.0 True False 243735.45209007847 202319.73978596603 206122.3442349545 197939.37605252428 195567.27854410847 154907.09509924997 155011.41628039657 145533.42132599207 182451.53160797452 185977.65558171115 1.3105630960219887 1.087871223847506 1.108317790060498 1.0643180517218511 1.0515633070671977 0.8329339060368464 0.8334948399878649 0.7825317556067938 0.9810400665461266 1.0 17.50476977255561 -5.54465955852637 0.8789816660963541 0.8686072916291177 1.2160745381832103 0.670368907385695 0.08625585217378681 0.38960317159910735 0.6158595815118431 0.04092864864792542 0.08892635777197641 2.8532540439795306e-06 5.54465955852637 0.34746724655409267 SENILENT(ph)DSMETDEIIPILEK ddPTM_KYSE-520_SHP099_60min_R1 1 SENILENTDSMETDEIIPILEK 22 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4;A8MV73 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 S(0.005)ENILENT(0.457)DS(0.457)MET(0.082)DEIIPILEK 56.528999999999996 0.060509 11538000.0 22269.0 22973.0 16567.0 16652.0 14664.0 18962.0 14334.0 21088.0 22340.0 22074.0 True False 21033.694177849073 21869.342596824 17634.935328137217 18234.60107339364 15817.973373253202 18843.65112440323 15783.020606358898 21014.850649976193 18283.619145571047 21878.441533312136 0.9613890525896531 0.9995841140478731 0.806041659836065 0.8334506388688434 0.722993607619114 0.8612885472537826 0.7213960181911337 0.9605277696758684 0.8356911125379928 1.0 14.417222353866395 -4.7595873694911965 24.9998303925235 0.8329937310350216 0.9804866281774776 0.294578566752821 0.08424609360764002 51.23695718333136 691583.489464436 0.0208078224640124 0.04958318348995271 1.739452727237494e-05 4.7595873694911965 0.14749289714245595 SEPFS(ph)PSLRPEPPKHPESIK ddPTM_KYSE-520_SHP099_60min_R1 2 SEPFSPSLRPEPPKHPESIK 20 2 O60885 O60885 BRD4 Bromodomain-containing protein 4 1 SEPFS(0.977)PS(0.023)LRPEPPKHPESIK;S(0.008)EPFS(0.95)PS(0.042)LRPEPPKHPESIK 149.07 7.491299999999999e-07 5966200000.0 1542160.0 1687440.0 1629010.0 2281270.0 1866730.0 1453360.0 1683910.0 1709220.0 2154200.0 1566840.0 True False 1456613.310580255 1606372.849500923 1734018.5911081578 2498081.2149111666 2013631.030759201 1444289.0411434812 1854136.0561778832 1703291.114754946 1763051.5829628077 1552959.0165830737 0.9379599171813271 1.0343948760704413 1.1165900533057618 1.608594424087002 1.2966414498109096 0.9300239257577476 1.1939375324002302 1.0968036481108454 1.135285325714515 1.0 20.566588326059986 -8.112874965234766 0.7278449255800987 1.0041675944987714 1.173209532694277 0.05814714396017773 0.185380964066356 2.8571061372535342 3.3724088774097627 0.2021164681765637 0.07700122751908418 7.711254465821668e-09 8.112874965234766 0.16904193819550573 SEPHS(ph)PGIPEIFR ddPTM_KYSE-520_SHP099_60min_R1 11 SEPHSPGIPEIFR 13 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR;SEPHS(1)PGIPEIFR 209.66 2.6065000000000003e-11 7998180000.0 2610090.0 2813780.0 2674880.0 2918080.0 2815400.0 3083330.0 3196010.0 3566520.0 4448570.0 3269950.0 True False 2465303.1046145805 2678601.7852301155 2847307.044759322 3195413.4458472575 3036955.9625652656 3064085.79376681 3519093.8808517586 3554148.5745520275 3640821.8273237683 3240980.7869826052 0.7606657572659693 0.8264787609938065 0.8785325282382194 0.9859402618743163 0.937048431377068 0.9454193021056176 1.0858113985081905 1.0966274742594155 1.1233703828011334 1.0 21.627999037493943 -4.99914933178889 0.4726928189588359 1.0868298889689947 0.6662813281317757 0.8183479805437545 0.048264495572556666 1.0587507033756818 0.3004814934972704 0.03890864044537262 0.2320817512946432 1.0019606555183413e-05 4.99914933178889 -0.42054856083721903 SEPSLEPESFRSPT(ph)FGK ddPTM_KYSE-520_SHP099_60min_R1 2 SEPSLEPESFRSPTFGK 17 1 Q9C0B5;Q9C0B5-2;H0YEF4 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5;Palmitoyltransferase 1 SEPSLEPESFRS(0.36)PT(0.64)FGK;SEPSLEPES(0.001)FRS(0.215)PT(0.783)FGK 156.58 3.708e-06 1485870000.0 287120.0 388090.0 326240.0 625200.0 628240.0 807720.0 804520.0 1150140.0 1541940.0 740530.0 True False 271192.8812404704 369445.5738650342 347269.95240245614 684618.8200267657 677678.9138033687 802678.7198714791 885848.7329585503 1146150.432784693 1261962.5651442176 733969.4803236224 0.36948795353302133 0.5033527738811946 0.473139499273645 0.9327619722347352 0.9233066659727677 1.0936132106168248 1.2069285667953948 1.5615777815166532 1.719366539038915 1.0 19.485360549084074 -5.8364623131285365 0.7160976504826497 1.4524171839169253 0.35307057533418096 0.7868634727469965 0.19651752740865866 0.32970516630297364 0.3699774776754148 0.12383784642665308 0.2023130158055698 1.4572621564148125e-06 5.8364623131285365 -1.0993466085827444 SEPVINNDNPLES(ph)NDEKEGQEATCSRPQIVPEPMDFR ddPTM_KYSE-520_SHP099_60min_R1 11 SEPVINNDNPLESNDEKEGQEATCSRPQIVPEPMDFR 37 2 P23497;P23497-3;P23497-4;P23497-2;E9PHV6;P23497-7;P23497-6;P23497-5;H7C4B4 P23497 SP100 Nuclear autoantigen Sp-100 1 SEPVINNDNPLES(1)NDEKEGQEATCSRPQIVPEPMDFR;SEPVINNDNPLES(1)NDEKEGQEATCSRPQIVPEPMDFR;SEPVINNDNPLES(1)NDEKEGQEATCSRPQIVPEPMDFR;SEPVINNDNPLES(1)NDEKEGQEATCSRPQIVPEPMDFR;SEPVINNDNPLES(1)NDEKEGQEATCSRPQIVPEPMDFR;SEPVINNDNPLES(0.663)NDEKEGQEAT(0.157)CS(0.18)RPQIVPEPMDFR;SEPVINNDNPLES(1)NDEKEGQEATCSRPQIVPEPMDFR;SEPVINNDNPLES(1)NDEKEGQEATCSRPQIVPEPMDFR;SEPVINNDNPLES(1)NDEKEGQEATCSRPQIVPEPMDFR;SEPVINNDNPLES(0.83)NDEKEGQEAT(0.085)CS(0.085)RPQIVPEPMDFR;SEPVINNDNPLES(1)NDEKEGQEATCSRPQIVPEPMDFR 338.43 4.5473999999999993e-82 54124860000.0 10542760.0 9455840.0 9007726.0 9348513.0 9163580.0 9714202.0 9598737.0 10825910.0 12356730.0 10118510.0 True False 9957932.086328983 9001567.252894785 9588378.43083118 10236992.864787074 9884701.612361945 9653572.06201773 10569071.010605527 10788357.444996394 10113059.319814336 10028867.873481665 0.99292683999355 0.8975656441438152 0.9560778496429068 1.0207525908139377 0.9856248718261685 0.9625784469195877 1.0538648174388923 1.0757303397647677 1.0083949103123884 1.0 23.25765541816762 -5.852750099266278 0.7630718607059999 1.0353459951691142 0.9429064530106086 0.37002605528470545 0.03806541974423126 0.7069552677187448 0.9052518052698537 0.02356280193471834 0.03661445768468997 1.4036211406874939e-06 5.852750099266278 -0.09243954215850558 SEPVINNDNPLES(ph)NDEKEGQEATCSRPQIVPEPMDFRK ddPTM_KYSE-520_SHP099_60min_R1 1 SEPVINNDNPLESNDEKEGQEATCSRPQIVPEPMDFRK 38 3 P23497;P23497-3;P23497-4;P23497-2;E9PHV6;P23497-7;P23497-6;P23497-5;H7C4B4 P23497 SP100 Nuclear autoantigen Sp-100 1 SEPVINNDNPLES(1)NDEKEGQEATCSRPQIVPEPMDFRK 200.09 4.774e-16 1206200000.0 629850.0 748530.0 777210.0 513500.0 599540.0 434360.0 362630.0 373210.0 928390.0 436370.0 True False 594910.964925153 712569.4952335629 827310.2001799673 562302.885610596 646720.3870840308 431648.99812233873 399288.17932774726 371915.4216178689 759817.778807372 432504.10129072296 1.3755036383464545 1.6475439032995067 1.912837815204581 1.3001099502467475 1.495293073878425 0.9980229015960026 0.9232009086992485 0.8599118956513033 1.7567874536677133 1.0 18.722354287842204 -5.939035597511186 1.831935327420571 1.0927984724122903 1.6165248315275078 0.3694631790587115 0.28169112083390363 0.3572455262923052 2.444068321867428 0.10418788604156673 0.11998686293785046 1.1507060659618272e-06 5.939035597511186 0.5237263591152175 SEPVKEES(ph)SELEQPFAQDTSSVGPDR ddPTM_KYSE-520_SHP099_60min_R1 5 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 S(0.005)EPVKEES(0.841)S(0.154)ELEQPFAQDTSSVGPDR;SEPVKEES(0.863)S(0.137)ELEQPFAQDTSSVGPDR;SEPVKEES(0.75)S(0.25)ELEQPFAQDTSSVGPDR;SEPVKEES(0.836)S(0.164)ELEQPFAQDTSSVGPDR;SEPVKEES(0.712)S(0.288)ELEQPFAQDTSSVGPDR 272.0 1.4424000000000002e-38 5506200000.0 1768910.0 1460660.0 1424710.0 1336740.0 1275210.0 1488080.0 1384090.0 1555050.0 1928380.0 1529630.0 True False 1670785.03606534 1390487.7011046421 1516549.0862165978 1463783.3676944624 1375561.7720476151 1478792.340744752 1524007.3246166639 1549655.8945014 1578234.8025038608 1516078.6682341322 1.1020437600453832 0.9171606528335542 1.0003102859978985 0.9655062091200179 0.9073155640728159 0.9754060733980184 1.0052297130410566 1.022147416866156 1.040997961103249 1.0 20.531913185185843 -6.9002530676222165 3.2212521572493635 1.0225370645218363 0.9724095433224516 0.12466466163272305 0.05077357405415618 0.46165849386958446 9.501185506043145 0.023081635882765406 0.014592227097403378 1.2581920373947394e-07 6.9002530676222165 -0.050127521199384795 SEPVKEES(ph)SELEQPFAQDTSSVGPDRK ddPTM_KYSE-520_SHP099_60min_R1 3 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEES(0.88)S(0.12)ELEQPFAQDTSSVGPDRK;SEPVKEES(0.834)S(0.166)ELEQPFAQDTSSVGPDRK;SEPVKEES(0.603)S(0.397)ELEQPFAQDTSSVGPDRK 271.58 2.5199e-41 4233250000.0 1075240.0 971850.0 1038420.0 867878.0 936070.0 912990.0 879329.0 989383.0 1343030.0 871510.0 True False 1015594.2937622009 925160.8672234104 1105358.2147307447 950360.8641829654 1009733.3834902559 907291.6907535559 968220.1567440324 985951.0612967274 1099169.607031168 863789.099424519 1.175743354991188 1.0710494816845675 1.2796621483961375 1.1002232660913676 1.1689582377955094 1.050362514829163 1.1208987904444365 1.1414256812844665 1.2724976591664172 1.0 19.720319585025024 SEPVKEESS(ph)ELEQPFAQDTSSVGPDRK ddPTM_KYSE-520_SHP099_60min_R1 1 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEES(0.036)S(0.964)ELEQPFAQDTSSVGPDRK 156.67 1.4262000000000002e-07 4243200000.0 54206.0 47794.0 55160.0 72129.0 57275.0 44944.0 58818.0 53990.0 61889.0 67244.0 True False 51199.08512301798 45497.90449974341 58715.7018591205 78984.11847362548 61782.216649827955 44663.48782486967 64763.897448361735 53802.72129136074 50651.517694728995 66648.2704750403 0.7681982556800476 0.6826569418149016 0.8809786276616053 1.1850887939125883 0.9269890457692419 0.6701372369684535 0.9717266027573174 0.8072635780025199 0.7599824771701754 1.0 16.024279817362466 -4.808849902920768 7.546678694210158 0.8993570087393581 0.7257280181704518 0.21194839561250312 0.1349579955154835 0.32552323338870925 43.52732151374649 0.03741976011026197 0.07961015079031482 1.5529236251710584e-05 4.808849902920768 -0.17362899056890624 SEPVKEESSELEQPFAQDT(ph)SSVGPDRK ddPTM_KYSE-520_SHP099_60min_R1 2 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDT(0.333)S(0.333)S(0.333)VGPDRK;SEPVKEESSELEQPFAQDT(0.455)S(0.455)S(0.089)VGPDRK 152.65 5.5214e-07 3246000000.0 450140.0 445930.0 389850.0 385630.0 352810.0 362460.0 364940.0 403420.0 502290.0 392740.0 True False 425169.8368681566 424506.8534454238 414980.35478205443 422280.1592561125 380574.13978569716 360197.75269229 401831.6966711742 402020.63017893623 411086.7977004864 389260.6291470966 1.0922497808209892 1.0905465943872996 1.0660732776682604 1.0848262774002204 0.9776846443976821 0.9253382585377672 1.0322947315571622 1.032780096614954 1.0560708351142851 1.0 18.570376908496268 -5.750940708631674 24.996626640017787 1.0031459396128835 1.0826934267492645 0.5643211550555453 0.03416850488225146 177.4351876884614 422459.04840167286 0.01128234226962848 0.014403370055000923 1.7744317158423294e-06 5.750940708631674 0.07954748713638105 SEPVKEESSELEQPFAQDTS(ph)SVGPDRK ddPTM_KYSE-520_SHP099_60min_R1 2 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDT(0.114)S(0.542)S(0.344)VGPDRK;SEPVKEESSELEQPFAQDT(0.074)S(0.54)S(0.386)VGPDRK 199.8 6.9212e-16 4371000000.0 1782510.0 1456340.0 1511310.0 1616480.0 1516680.0 1363610.0 1580770.0 1522690.0 2055600.0 1524060.0 True False 1683630.6169544125 1386375.240389095 1608731.4607814979 1770109.7731875682 1636034.0872712513 1355099.204184555 1740569.6584284874 1517408.143788519 1682354.8574590804 1510558.0141007367 1.1145752769758461 0.917790132816865 1.0649915102659633 1.1718250849447496 1.0830660404957786 0.8970851774873875 1.1522693217874727 1.0045348338983593 1.1137307152420872 1.0 20.526650162226968 -10.040855479789599 4.318475347569502 0.9999960742347156 1.0544460701066072 0.03619009632537018 0.08794097373052383 3.26328343533782e-06 7.249345247149168e-07 0.08359596430754686 0.020273537519476848 9.102161149323288e-11 10.040855479789599 0.05444999587189159 SEPVKEESSELEQPFAQDTSS(ph)VGPDR ddPTM_KYSE-520_SHP099_60min_R1 5 SEPVKEESSELEQPFAQDTSSVGPDR 26 1 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDT(0.077)S(0.396)S(0.526)VGPDR;SEPVKEESSELEQPFAQDT(0.008)S(0.083)S(0.91)VGPDR;SEPVKEESSELEQPFAQDT(0.002)S(0.221)S(0.777)VGPDR;SEPVKEESSELEQPFAQDTS(0.066)S(0.934)VGPDR;SEPVKEESSELEQPFAQDTS(0.015)S(0.984)VGPDR 218.93 8.4984e-22 4958690000.0 3185310.0 2984570.0 2752620.0 2559930.0 2740170.0 2645340.0 2665860.0 3020890.0 3494700.0 2785050.0 True False 3008614.504541943 2841186.7772690947 2930058.289547722 2803224.977528978 2955805.7895654114 2628829.4518209514 2935351.145086362 3010411.2376710256 2860150.5742178685 2760376.6237361156 1.0899289896426678 1.0292750463245135 1.0614704762938998 1.015522647679456 1.0707980078329986 0.9523444841606006 1.0633879159262773 1.0905798910862001 1.0361450497819065 1.0 21.396433689996943 -3.0964800750610175 1.8088596114086415 1.0375293595384452 3.3603454984698273 0.14855433337399204 0.03805811390315459 141.6171878240922 12.584393845119802 0.010231364158704485 1281.5253218630598 0.0008007923671108213 3.0964800750610175 2.3228161389313824 SEPVKEESSELEQPFAQDTSS(ph)VGPDRK ddPTM_KYSE-520_SHP099_60min_R1 1 SEPVKEESSELEQPFAQDTSSVGPDRK 27 2 Q15424-2;Q15424;Q15424-4;Q15424-3;Q14151 Q15424-2;Q14151 SAFB;SAFB2 Scaffold attachment factor B1;Scaffold attachment factor B2 1 SEPVKEESSELEQPFAQDT(0.131)S(0.131)S(0.739)VGPDRK 81.884 0.0026976999999999995 511520000.0 756770.0 661950.0 701430.0 642310.0 652260.0 693270.0 593190.0 695740.0 833350.0 720960.0 True False 714790.4595164064 630148.9283927939 746645.3001276803 703354.9492824575 703589.1511482627 688943.0447745511 653155.4341765058 693326.6403269363 682034.6470439403 714572.855298393 1.0003045234875632 0.8818539967203971 1.0448833797582395 0.9843012424376921 0.9846289932948211 0.9641326838351011 0.9140501620422729 0.9702672515280688 0.9544648134711674 1.0 19.446721585295055 -6.517061315869519 24.816550528228383 0.9546283469571719 0.977385837815715 0.04009696766900561 0.042728890901814656 811.1615519189568 3460361.3436515573 0.015758280325587116 0.012622266995281356 3.040455728608151e-07 6.517061315869519 0.02275749085854306 SEPVS(ph)PQDFSFSK ddPTM_KYSE-520_SHP099_60min_R1 3 SEPVSPQDFSFSK 13 0 P48552 P48552 NRIP1 Nuclear receptor-interacting protein 1 1 SEPVS(1)PQDFSFSK;SEPVS(1)PQDFSFSK;SEPVS(1)PQDFSFSK 217.19 2.6273000000000003e-11 243010000.0 1557760.0 1593230.0 1213490.0 1328320.0 1448710.0 1792590.0 1628930.0 1971540.0 2095280.0 1947750.0 True False 1471347.947482428 1516688.8393130142 1291713.5070526493 1454563.1334260302 1562715.23496765 1781401.780882504 1793598.141224794 1964701.1879008948 1714829.9697104765 1930494.4503265705 0.7621611899653629 0.7856478629381425 0.6691101892751558 0.7534666225950405 0.8094896282676671 0.9227696979813408 0.9290874371181858 1.0177191587204706 0.8882853661767267 1.0 20.880538976233915 -6.192428216475429 1.7831224635149607 0.9610717829249577 0.7389587367254281 0.8441115507244431 0.04307798815940542 0.1314614196457841 0.8263973003106213 0.017332042525140232 0.01663382681014946 6.420543364056408e-07 6.192428216475429 -0.22211304619952954 SERLHT(ph)RQMK ddPTM_KYSE-520_SHP099_60min_R1 1 SERLHTRQMK 10 2 E7EWD6;Q76L83 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 SERLHT(1)RQMK 61.65 0.03608 7788600000.0 5869400.0 5732900.0 5014300.0 3844900.0 4113800.0 5349300.0 4266100.0 4880300.0 6367200.0 5297200.0 True False 5543812.681641177 5457482.87874166 5337529.801163672 4210318.139988662 4437532.655679826 5315913.034477911 4697359.021123742 4863371.378370586 5211076.984050127 5250270.929159238 1.0559098295007314 1.0394669060660464 1.0166198798465447 0.8019239762666664 0.8452006983171891 1.012502612951668 0.8946888807271441 0.9263086503517621 0.9925348718879565 1.0 22.323960441258997 -5.023915232124552 23.751190071900172 0.9198739744489707 1.0427771795356546 0.3997158406236463 0.06373952408376621 374.1890906209754 371623.5719868878 0.017753914393132807 0.031016917253790768 9.464218709249636e-06 5.023915232124552 0.12290320508668395 SERPPTILMTEEPSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 SERPPTILMTEEPSSPK 17 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SERPPTILMTEEPS(0.091)S(0.909)PK;SERPPTILMTEEPS(0.032)S(0.968)PK;SERPPTILMTEEPS(0.208)S(0.792)PK;SERPPTILMTEEPS(0.073)S(0.927)PK;SERPPTILMTEEPS(0.083)S(0.917)PK;SERPPTILMTEEPS(0.031)S(0.969)PK;SERPPTILMTEEPS(0.07)S(0.93)PK;SERPPTILMTEEPS(0.029)S(0.971)PK;SERPPTILMT(0.001)EEPS(0.064)S(0.935)PK 134.62 1.0142e-05 13850970000.0 7797330.0 6600780.0 6004750.0 6660060.0 7340020.0 8035070.0 8241190.0 9741180.0 10639160.0 8796800.0 True False 7364796.561308009 6283668.620827229 6391825.792939704 7293030.099979939 7917637.8149990365 7984920.147672111 9074289.911463575 9707390.120188499 8707356.735398095 8718867.195806848 0.844696495073345 0.7206978245808382 0.7331027815188784 0.8364653269965352 0.9081039585976094 0.9158208249246287 1.040764781441752 1.1133774494073105 0.9986798215696773 1.0 23.055709273459943 -6.137154853557489 1.0911695783785462 1.0489485298339032 0.7623021066794672 0.8319779582115758 0.05041156051788346 0.18471431125853283 0.46303404542402704 0.026123631074717116 0.0265776597376078 7.291974587018649e-07 6.137154853557489 -0.286646423154436 SES(ph)APTLHPYSPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 SESAPTLHPYSPLSPK 16 0 Q8WUF5;K7EN03 Q8WUF5 PPP1R13L RelA-associated inhibitor 2 S(0.081)ES(0.918)APTLHPYSPLS(1)PK;S(0.094)ES(0.906)APTLHPYS(0.007)PLS(0.993)PK;S(0.016)ES(0.984)APTLHPYS(0.006)PLS(0.994)PK;S(0.004)ES(0.995)APTLHPYS(0.001)PLS(0.999)PK;S(0.133)ES(0.867)APTLHPYS(0.001)PLS(0.999)PK;S(0.016)ES(0.94)APT(0.044)LHPY(0.022)S(0.085)PLS(0.893)PK 197.46 1.4474e-12 2935910000.0 2477470.0 2862270.0 2309530.0 2929480.0 2790680.0 2379890.0 3021980.0 3292410.0 4487980.0 2955930.0 True False 2340039.8003859967 2724762.252845141 2458405.999178653 3207896.8984197187 3010290.639202827 2365036.223734629 3327471.230082632 3280989.3981642695 3673075.9647690235 2929742.759878741 0.7987185197388621 0.9300346399551871 0.8391200868708364 1.094941488498632 1.0274931575656219 0.8072504713118619 1.1357554238722147 1.1198899244997422 1.2537196149333767 1.0 21.482342566620346 -5.308411971004188 0.4309715519219616 1.1288242397653085 0.7608131891139408 0.40791868723100744 0.11292738283882867 2.3982790975435897 0.6564172596120329 0.1023783160426665 0.41777916239540086 4.91573009125951e-06 5.308411971004188 -0.36801105065136774 SES(ph)ELIDELSEDFDR ddPTM_KYSE-520_SHP099_60min_R1 8 SESELIDELSEDFDR 15 0 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;D6RC54;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 1 SES(1)ELIDELSEDFDR;SES(1)ELIDELSEDFDR;S(0.001)ES(0.999)ELIDELSEDFDR;S(0.001)ES(0.999)ELIDELSEDFDR;SES(1)ELIDELSEDFDR;S(0.006)ES(0.994)ELIDELSEDFDR;SES(1)ELIDELSEDFDR;SES(1)ELIDELSEDFDR 486.66 4.1332e-152 4980302000.0 2489025.0 2334676.0 1885099.0 2069408.0 2198354.0 2718868.0 2468093.0 2904900.0 3297710.0 2940500.0 True False 2350953.8215016727 2222514.6605398785 2006615.497805041 2266083.9141297988 2371351.952876747 2701898.5362991216 2717591.926706442 2894823.5799087584 2698928.9925040794 2914449.457674386 0.8066545176520713 0.7625847326628049 0.6885058488563531 0.7775341267842891 0.8136534832101673 0.927069957993071 0.9324546423512081 0.9932660085375822 0.9260510541355267 1.0 21.474791951996284 -6.206364773986745 1.6448071239272672 0.9649388610402643 0.7516101977805103 0.8844921559979658 0.03433940033530585 0.11894016556975426 0.6391855896570765 0.014698795565981675 0.013935794235432912 6.217778202029336e-07 6.206364773986745 -0.21332866325975397 SES(ph)ELIDELSEDFDRSECK ddPTM_KYSE-520_SHP099_60min_R1 7 SESELIDELSEDFDRSECK 19 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;D6RC54;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 1 S(0.026)ES(0.974)ELIDELSEDFDRSECK;S(0.136)ES(0.864)ELIDELSEDFDRSECK;SES(1)ELIDELSEDFDRSECK;S(0.01)ES(0.99)ELIDELSEDFDRSECK;SES(1)ELIDELSEDFDRSECK;S(0.007)ES(0.993)ELIDELSEDFDRSECK;S(0.029)ES(0.971)ELIDELSEDFDRSECK 297.68 3.5371e-44 2504612000.0 987046.0 1212811.0 1125143.0 929348.0 1025677.0 1021406.0 888070.0 1050598.0 1868990.0 1136548.0 True False 932292.5907525801 1154545.739093576 1197671.5180724524 1017672.9545013363 1106391.9445961684 1015031.0262826814 977844.7823279718 1046953.7207494177 1529628.529403797 1126479.0689409638 0.8276164346569314 1.024915394281581 1.0631990873993058 0.9034104428217035 0.9821682222966823 0.9010651456106876 0.8680541070747746 0.9294036166457045 1.3578845551403327 1.0 20.103389076492174 -7.731109066547678 24.994573201885373 1.178942385866776 0.9414102369442432 0.4607102831899821 0.10442873113093909 146.6284033953085 120833.85157128124 0.06726643715622502 0.025417526887268664 1.8573379539370234e-08 7.731109066547678 -0.23753214892253283 SES(ph)GGLGVSMVEYVLS(ph)SSPGDSCLRK ddPTM_KYSE-520_SHP099_60min_R1 1 SESGGLGVSMVEYVLSSSPGDSCLRK 26 1 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 2 S(0.429)ES(0.558)GGLGVS(0.011)MVEY(0.006)VLS(0.688)S(0.153)S(0.148)PGDS(0.008)CLRK 53.728 0.047546 41046000.0 29583.0 45232.0 36304.0 36350.0 30913.0 31432.0 26075.0 36202.0 45128.0 26175.0 True False 27941.972017751563 43058.98682538383 38644.213928453755 39804.693070974005 33345.677229090004 31235.821228891597 28710.915467476505 36076.42371161032 36933.89278430304 25943.10986384184 1.0770479007490013 1.6597465396928843 1.4895752333190422 1.5343069231053028 1.285338473455932 1.2040122172256018 1.1066875026996008 1.390597499719637 1.4236493997113115 1.0 14.663063808877796 -5.879746820439807 5.661692436906379 1.242521699566743 1.458465683646332 0.2358569555362675 0.18070586418053472 0.30932695259164195 14.134546813618396 0.0558782216309642 0.06378679027621814 1.3190254634158213e-06 5.879746820439807 0.21594398407958892 SES(ph)LDPDSSMDTTLILK ddPTM_KYSE-520_SHP099_60min_R1 3 SESLDPDSSMDTTLILK 17 0 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 S(0.002)ES(0.998)LDPDSSMDTTLILK;SES(0.972)LDPDS(0.027)SMDTTLILK;SES(1)LDPDSSMDTTLILK 335.23 1.0352999999999998e-58 185214000.0 437770.0 514320.0 379912.0 321548.0 346612.0 473610.0 379642.0 500650.0 570340.0 535350.0 True False 413486.02542714047 489611.29518994095 404401.73540069215 352107.8252430687 373888.39244749275 470654.02431329107 418019.9183088676 498913.36200258834 466780.63310138654 530607.2154959979 0.77926951114041 0.9227377255551735 0.7621489561212768 0.6635941143656092 0.7046424954813167 0.8870102225679986 0.7878142364085897 0.9402687099462397 0.8797103007071851 1.0 19.017284768717168 -7.431353869208838 0.9552630036524826 0.979930788233107 0.7765537457441594 0.47043833044712835 0.07550991998016247 0.5305033312420157 0.8871104210263354 0.07459482811022845 0.028694472571453848 3.703788089719506e-08 7.431353869208838 -0.2033770424889476 SES(ph)LELPQAAPPQIYHEK ddPTM_KYSE-520_SHP099_60min_R1 4 SESLELPQAAPPQIYHEK 18 0 B0QY58;B0QY55;B0QY57;B0QY56;H0YGT9;Q15040 B0QY58 JOSD1 Josephin-1 1 S(0.195)ES(0.805)LELPQAAPPQIYHEK;S(0.222)ES(0.778)LELPQAAPPQIYHEK;S(0.059)ES(0.941)LELPQAAPPQIYHEK;S(0.497)ES(0.503)LELPQAAPPQIYHEK 153.83 1.269e-06 1673440000.0 2833930.0 2741590.0 2400740.0 2582610.0 2861370.0 2980160.0 2791790.0 2945430.0 3423180.0 2696770.0 True False 2676726.253600603 2609879.9011895116 2555495.541719816 2828060.4779099887 3086543.5400317432 2961559.716005774 3074011.378444723 2935212.990798528 2801616.8033453813 2672878.7158553135 1.001439473374705 0.9764303504337486 0.9560836137310723 1.0580579137894095 1.1547637839766547 1.1080037782627499 1.150075145650987 1.0981467185125413 1.0481645825253512 1.0 21.349962944876037 -5.439027665556938 4.366499195932437 1.1021881543506344 0.979020693055576 0.5683657383065441 0.04435060916779105 0.14810884140284233 5.068380571613615 0.012580129121264362 0.018769665920734147 3.6389185464113198e-06 5.439027665556938 -0.1231674612950584 SES(ph)LKGR ddPTM_KYSE-520_SHP099_60min_R1 5 SESLKGR 7 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 SES(1)LKGR;S(0.006)ES(0.994)LKGR;S(0.007)ES(0.993)LKGR;S(0.001)ES(0.999)LKGR;S(0.001)ES(0.999)LKGR 138.98 0.0011182 7552500000.0 12581740.0 10614270.0 9812750.0 10562850.0 10936920.0 10821180.0 11227590.0 10069710.0 13423200.0 11344980.0 True False 11883805.801123112 10104344.536855917 10445295.56595513 11566740.088163339 11797593.38143755 10753641.001707098 12362584.367918866 10034780.526297973 10985885.251335235 11244472.303460881 1.0568575812548762 0.8986054893608436 0.9289271460733843 1.02866010747372 1.0491904878280882 0.9563491030519313 1.0994365973149176 0.8924189820103356 0.9770031847518486 1.0 23.4227126220775 -3.924140040188782 19.078394389911075 0.9824181563143336 3.1419348448956725 0.11569640323324826 0.0626848620037687 492.91081985490734 131872.98306261183 0.015261964321014343 2880.1502608129094 0.00011908579486636911 3.924140040188782 2.159516688581339 SES(ph)LSNCSIGK ddPTM_KYSE-520_SHP099_60min_R1 7 SESLSNCSIGK 11 0 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 SES(0.993)LS(0.007)NCSIGK;S(0.002)ES(0.998)LS(0.001)NCSIGK;SES(0.768)LS(0.232)NCSIGK;S(0.007)ES(0.993)LSNCSIGK;SES(0.967)LS(0.033)NCSIGK;SES(1)LSNCSIGK;SES(0.994)LS(0.006)NCSIGK 262.73 2.2136000000000002e-20 9939560000.0 10876510.0 10086530.0 8926770.0 8241210.0 9064590.0 9711670.0 8981230.0 10285450.0 11112290.0 10214370.0 True False 10273168.308514863 9601957.95860981 9502203.87753701 9024452.120589865 9777921.662537988 9651055.865168927 9889140.376757976 10249772.174592087 9094578.254034813 10123878.628459614 1.014746292950962 0.9484465698371163 0.9385932236312089 0.8914026384335437 0.9658276260889682 0.9532962829126066 0.9768134071617812 1.0124353077266819 0.8983294434673194 1.0 23.271258780924388 -6.527595359382721 2.593830091536088 0.9725068607333539 0.9476923345635847 0.04921425473351493 0.039976947872904504 0.8574013364083707 11.639102706193736 0.01676384708987579 0.01311238085828911 2.9675950678924357e-07 6.527595359382721 -0.024814526169769202 SES(ph)PCESPYPNEKDKEK ddPTM_KYSE-520_SHP099_60min_R1 1 SESPCESPYPNEKDKEK 17 2 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;B7ZBA0;H0Y594;B7ZB98 A0A0C4DG98 THOC2 THO complex subunit 2 1 S(0.011)ES(0.989)PCESPYPNEKDKEK 169.39 1.804e-08 467090000.0 351420.0 378420.0 344140.0 264530.0 317960.0 296620.0 244480.0 289320.0 368210.0 261130.0 True False 331926.0320615979 360240.13517999975 366323.815043469 289670.85166615545 342981.64305507235 294768.68455439765 269194.4242948669 288316.4164477956 301352.345818743 258816.59135606565 1.282475865718177 1.3918741966754409 1.4153799535189027 1.1192128377413109 1.325191871425341 1.1389095382562668 1.040097247569898 1.1139796522980465 1.1643470932053155 1.0 17.98157057824284 -5.9427230111912 0.8229774095091069 1.077404288479371 1.3647421520753071 0.6245515890275096 0.08449802242721441 0.4268543887490647 0.6388474548855219 0.04907056223093657 0.06622721210472854 1.1409772597803149e-06 5.9427230111912 0.28733786359593605 SES(ph)PKEPEQLR ddPTM_KYSE-520_SHP099_60min_R1 14 SESPKEPEQLR 11 1 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.028)ES(0.972)PKEPEQLR;S(0.003)ES(0.997)PKEPEQLR;S(0.002)ES(0.998)PKEPEQLR;S(0.053)ES(0.947)PKEPEQLR;S(0.003)ES(0.997)PKEPEQLR;SES(1)PKEPEQLR;S(0.005)ES(0.995)PKEPEQLR;S(0.085)ES(0.915)PKEPEQLR;S(0.002)ES(0.998)PKEPEQLR;SES(1)PKEPEQLR;S(0.002)ES(0.998)PKEPEQLR;S(0.014)ES(0.986)PKEPEQLR;S(0.004)ES(0.996)PKEPEQLR;S(0.046)ES(0.954)PKEPEQLR 199.95 1.671e-07 325276500000.0 114943960.0 98984800.0 94041890.0 94546440.0 103014940.0 96596830.0 101553640.0 105023120.0 119796410.0 99918410.0 True False 108567789.40369652 94229421.62878604 100103980.70174414 103532105.2311762 111121629.70316932 95993933.35319537 111819672.99921533 104658819.30930059 98044401.76574194 99033210.62274677 1.0962765795534026 0.9514931509969914 1.0108122323033262 1.0454281405211363 1.1220642954460165 0.9693105247175202 1.1291128733084987 1.0568052742224403 0.9900153811959954 1.0 26.56140907593009 -5.291939200031459 6.373096330427633 1.0507762723042284 1.0126781522879684 0.026117130738830485 0.05909043495718971 0.5107225139253486 71.85519372993498 0.016059276910316108 0.02457698843398799 5.105764741985348e-06 5.291939200031459 -0.038098120016260006 SES(ph)PKEPEQLRK ddPTM_KYSE-520_SHP099_60min_R1 8 SESPKEPEQLRK 12 2 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 1 S(0.08)ES(0.92)PKEPEQLRK;S(0.002)ES(0.998)PKEPEQLRK;S(0.001)ES(0.999)PKEPEQLRK;S(0.001)ES(0.999)PKEPEQLRK;S(0.001)ES(0.999)PKEPEQLRK;S(0.069)ES(0.931)PKEPEQLRK;S(0.176)ES(0.824)PKEPEQLRK;S(0.004)ES(0.996)PKEPEQLRK 158.89 1.0472e-05 320974300000.0 87449700.0 77036100.0 76536500.0 66976500.0 76088800.0 69646100.0 70183000.0 71244900.0 90594900.0 70825400.0 True False 82598690.81434509 73335170.12245657 81470165.25272979 73341926.422781 82076555.67394899 69211412.85599093 77277782.560073 70997768.07058467 74145149.87157987 70197942.05732739 1.176654021379866 1.044691168618122 1.1605776873942673 1.0447874150339915 1.169215980817798 0.9859464654885352 1.1008553854322942 1.011393866968409 1.056229679938893 1.0 26.064925400906507 -4.360130094372724 0.1634804776690925 0.9768363460833338 1.270474343108577 0.3461368686137931 0.05542853574387232 23.278490107247602 0.6927337724418967 0.200622559179408 1.4688538736382968 4.363850920372891e-05 4.360130094372724 0.2936379970252432 SES(ph)PMQEIVTDDGENLRPIVIDGSNVAMSHGNK ddPTM_KYSE-520_SHP099_60min_R1 4 SESPMQEIVTDDGENLRPIVIDGSNVAMSHGNK 33 1 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 S(0.006)ES(0.994)PMQEIVTDDGENLRPIVIDGSNVAMSHGNK;S(0.001)ES(0.999)PMQEIVTDDGENLRPIVIDGSNVAMSHGNK;S(0.234)ES(0.765)PMQEIVT(0.001)DDGENLRPIVIDGSNVAMSHGNK;S(0.004)ES(0.996)PMQEIVTDDGENLRPIVIDGSNVAMSHGNK 349.58 1.9375999999999992e-82 2264230000.0 1427010.0 1355220.0 1139780.0 1194470.0 1183210.0 1173690.0 982390.0 1009750.0 1402900.0 1092750.0 True False 1347850.910626091 1290113.1969733073 1213252.0425124783 1307992.0696694984 1276321.8954560074 1166364.5653517998 1081699.5684024636 1006247.4129274223 1148168.724231049 1083069.0851466353 1.2444736250999235 1.1911642707433021 1.1201982026365545 1.2076718720970703 1.1784307325909944 1.076906894811689 0.9987355222645042 0.9290703859312796 1.0601066358344076 1.0 20.04669383962002 -6.472484403105943 2.3145611323232713 0.9902238977988508 1.1873213014736324 0.8272918659813937 0.041334766778599444 0.12108925087356848 1.2893424790404915 0.017468484414948894 0.014037145458942532 3.3691131507949814e-07 6.472484403105943 0.19709740367478157 SES(ph)PPAELPSLR ddPTM_KYSE-520_SHP099_60min_R1 6 SESPPAELPSLR 12 0 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 SES(1)PPAELPSLR;SES(1)PPAELPSLR;SES(1)PPAELPSLR;S(0.001)ES(0.999)PPAELPSLR;SES(1)PPAELPSLR;SES(1)PPAELPSLR 296.32 7.2282e-30 9395260000.0 5529520.0 5315500.0 4605690.0 3905790.0 4435850.0 4914800.0 4486130.0 5178650.0 5973140.0 5269690.0 True False 5222786.502775155 5060135.40127184 4902580.146764554 4276995.107281418 4784926.158465979 4884124.910147505 4939631.800809595 5160686.471855994 4888568.346605913 5223004.646356785 0.9999582340824105 0.9688169442471104 0.9386513087221285 0.8188763742082368 0.9161251965961049 0.9351178566448989 0.9457452434500797 0.9880685201870806 0.9359685999926973 1.0 22.31644855644865 -6.952013679149395 2.6007802027042786 0.9716104835749353 0.9257920091337085 0.15396090954814123 0.04638205600377138 0.60432022256445 8.23662098124223 0.026027027801204278 0.015182635244467757 1.1168280700399838e-07 6.952013679149395 -0.045818474441226775 SES(ph)PPAELPSLRR ddPTM_KYSE-520_SHP099_60min_R1 2 SESPPAELPSLRR 13 1 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.023)ES(0.977)PPAELPSLRR;S(0.009)ES(0.991)PPAELPSLRR 116.96 7.8842e-05 367110000.0 617380.0 618640.0 558840.0 414950.0 452210.0 488560.0 399970.0 422180.0 651580.0 473420.0 True False 583132.7006834823 588919.6058024291 594863.7205756138 454386.7232407333 487796.3542770617 485510.7158178692 440402.87093102874 420715.55611755245 533269.4969951294 469225.86711518705 1.2427548043516814 1.2550876818090237 1.2677555997346257 0.9683752646338848 1.0395768615145762 1.0347057778438384 0.938573300825543 0.89661628994182 1.1364878502408324 1.0 18.83992302175497 -5.259127891292331 24.98990812781086 0.9980199238411775 1.2551882100380654 0.7830356486946656 0.06103938655434385 88.4753312138467 956517.2207575552 0.01681786488588495 0.02743848236991912 5.5064551811406105e-06 5.259127891292331 0.2571682861968878 SES(ph)PPPLSDPK ddPTM_KYSE-520_SHP099_60min_R1 4 SESPPPLSDPK 11 0 Q15059-2;Q15059 Q15059-2 BRD3 Bromodomain-containing protein 3 1 SES(1)PPPLSDPK;S(0.004)ES(0.996)PPPLSDPK;SES(1)PPPLSDPK;S(0.001)ES(0.999)PPPLSDPK 248.21 1.6309e-14 5560110000.0 8432440.0 8801200.0 7401440.0 6474070.0 6675910.0 7618540.0 6810810.0 8794100.0 9799800.0 8513650.0 True False 7964675.7435476165 8378377.1411294695 7878548.6651227195 7089363.66629987 7201266.13626805 7570989.8659060765 7499313.141900049 8763595.31965838 8020403.352854387 8438225.684519464 0.9438803892338873 0.9929074493113178 0.9336736133493665 0.8401486202609894 0.8534099946484359 0.8972253349179325 0.8887310463452147 1.0385590107806466 0.9504845749229482 1.0 23.008508242989866 -7.251455423626312 24.939634121519454 0.995891345780245 0.9064343962505848 0.44162973092907243 0.04596146367061926 676.0272096001414 1688702.1743827031 0.02468872463446405 0.014034795531966399 5.604599405211164e-08 7.251455423626312 -0.08945694952966021 SES(ph)PPYSFVVR ddPTM_KYSE-520_SHP099_60min_R1 1 SESPPYSFVVR 11 0 Q68DK2-3;Q68DK2-5;Q68DK2-2;Q68DK2 Q68DK2-3 ZFYVE26 Zinc finger FYVE domain-containing protein 26 1 SES(1)PPYSFVVR 90.689 0.0047503 0.0 120120.0 116440.0 96219.0 99884.0 102190.0 112530.0 113090.0 101070.0 121550.0 100520.0 True False 113456.70414671661 110846.0476199968 102421.43069584316 109376.94532878046 110231.77161843581 111827.658529116 124522.24085203906 100719.41175991543 99479.58402614859 99629.47100337666 1.1387865759406803 1.1125829185245797 1.0280234318655759 1.0978372586669003 1.1064173131532518 1.1224355344145702 1.2498534780719526 1.0109399432272588 0.998495555825816 1.0 16.604284942940282 -7.481508473914337 24.9975275091822 1.0010709518232208 1.117710713488337 0.5285564557302229 0.05150592549317721 399.0751811842084 241137.64561098666 0.02966623896145413 0.014248559589421582 3.299829692504078e-08 7.481508473914337 0.11663976166511625 SES(ph)PQKEDGLSSQLK ddPTM_KYSE-520_SHP099_60min_R1 3 SESPQKEDGLSSQLK 15 1 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 SES(1)PQKEDGLSSQLK;S(0.001)ES(0.999)PQKEDGLSSQLK;SES(1)PQKEDGLSSQLK 234.8 8.2681e-19 2755230000.0 4687500.0 4002800.0 3394260.0 3618640.0 3664490.0 4043200.0 4069300.0 4435400.0 4716300.0 4349500.0 True False 4427475.030700417 3810499.4796747053 3613059.430608016 3962554.4576162077 3952864.514904023 4017964.88905111 4480664.556540828 4420014.632630142 3859938.808247834 4310966.813859798 1.0270260064322565 0.8839083305916238 0.8381088481108221 0.9191799957440078 0.9169322533858362 0.9320333610858047 1.0393641960164135 1.0252954438015516 0.8953765999399705 1.0 22.039580025910592 -6.590915861463359 6.925535764569526 0.9919203869255582 0.9122091836816174 0.270283715382327 0.05683971620428528 0.28396424838267265 23.499724501138317 0.02218715165245137 0.01714159998243769 2.5649809178869817e-07 6.590915861463359 -0.07971120324394076 SES(ph)SDFEVVPK ddPTM_KYSE-520_SHP099_60min_R1 1 SESSDFEVVPK 11 0 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.085)ES(0.458)S(0.458)DFEVVPK 122.51 0.009834299999999999 0.0 396910.0 447960.0 394360.0 467940.0 418150.0 396720.0 368530.0 437580.0 465000.0 389980.0 True False 374892.61107953085 426439.3291983312 419781.07659830945 512412.87690870906 451056.02605195245 394243.92332418787 405784.60890619823 436062.13711193984 380567.7216960849 386525.08059984894 0.9699050071931539 1.1032643173802312 1.0860383909547355 1.3256911456133575 1.1669515089472533 1.0199698366593961 1.0498273702613563 1.1281600056462424 0.9845873936704992 1.0 18.56020250432579 -6.263074844591602 24.9673308204497 1.0453513233598224 1.1372524987299952 0.2080571753232947 0.09024685727535557 267.7272955452588 4087149.4061677693 0.032953305044772126 0.030582390463009795 5.456638154461532e-07 6.263074844591602 0.09190117537017284 SESAPTLHPYS(ph)PLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 SESAPTLHPYSPLSPK 16 0 Q8WUF5;K7EN03 Q8WUF5 PPP1R13L RelA-associated inhibitor 2 SESAPTLHPY(0.009)S(0.991)PLS(1)PK;SESAPTLHPY(0.007)S(0.993)PLS(1)PK;SESAPTLHPYS(1)PLS(1)PK;SESAPT(0.024)LHPY(0.002)S(0.974)PLS(1)PK;SES(0.004)APT(0.009)LHPY(0.019)S(0.967)PLS(1)PK 302.84 4.7369e-31 2747890000.0 2346400.0 2355740.0 2199960.0 2667690.0 2244810.0 2282770.0 2336250.0 2192330.0 2867840.0 2236230.0 True False 2216240.514567562 2242566.714362172 2341772.941660455 2921226.455529757 2421463.775778265 2268522.385679461 2572420.949602759 2184725.318923668 2347112.5483632255 2216418.741960615 0.9999195876710123 1.0117973972636718 1.0565570924512908 1.3179939332879302 1.0925118660728659 1.0235080324545334 1.1606204644016092 0.9857006158462136 1.0589662070295438 1.0 21.07979904090952 -7.2773980045837146 24.830973754435785 1.0167500578766502 1.0958112890229559 0.14365993823896483 0.08923300335532446 1719.0010645754148 2674680.284524503 0.05177821823202507 0.02498095345481561 5.2796118555696114e-08 7.2773980045837146 0.0790612311463057 SESAPTLHPYSPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 SESAPTLHPYSPLSPK 16 0 Q8WUF5;K7EN03 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 SESAPTLHPY(0.045)S(0.058)PLS(0.898)PK;SESAPTLHPY(0.001)S(0.004)PLS(0.995)PK;SESAPTLHPYS(0.001)PLS(0.999)PK;SESAPTLHPYSPLS(1)PK;SESAPTLHPYSPLS(1)PK;SESAPTLHPYSPLS(1)PK;SESAPTLHPYSPLS(1)PK;SESAPTLHPYSPLS(1)PK;SESAPTLHPYSPLS(1)PK 244.52 2.1385999999999997e-23 31452328000.0 9853182.0 11714230.0 8660424.0 14137510.0 9055465.0 12645090.0 11594669.0 13124020.0 16620600.0 13583290.0 True False 9306606.352628654 11151460.807382299 9218688.78820834 15481134.699802622 9768078.576952146 12566167.30285203 12766771.295584654 13078495.837789305 13602718.01122998 13462952.618239695 0.6912752808785796 0.8283072163734891 0.6847449478295571 1.1499063495795625 0.7255524738101128 0.9333886599160504 0.9482891054885055 0.9714433533748364 1.010381481459047 1.0 23.68249151253631 -2.6936647538651304 0.2931097200102551 1.0050753935736285 1.4963551580956486e-10 0.3881949013351853 0.11557720236538718 21.306369347330556 0.7227785379188257 0.12189179562462672 9.12195520833324 0.002024581416335133 2.6936647538651304 -1.005075393423993 SESELIDELS(ph)EDFDR ddPTM_KYSE-520_SHP099_60min_R1 3 SESELIDELSEDFDR 15 0 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;D6RC54;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 1 SESELIDELS(1)EDFDR;SESELIDELS(1)EDFDR;SESELIDELS(1)EDFDR 294.97 2.9135e-33 497150000.0 500293.0 480059.0 480178.0 487154.0 472608.0 446993.0 427922.0 527031.0 551400.0 495795.0 True False 472540.7499806301 456996.24505675095 511131.04219196446 533452.9696918089 509799.56082831696 444203.150883365 471180.5318762602 525202.8524709604 451279.6596628409 491402.64202267263 0.9616162176816863 0.9299832886036168 1.0401471186399962 1.0855720422992683 1.0374375659233748 0.9039494558982654 0.958848185953629 1.0687831272317991 0.9183500882398989 1.0 18.906546088796965 SESELIDELS(ph)EDFDRSECK ddPTM_KYSE-520_SHP099_60min_R1 6 SESELIDELSEDFDRSECK 19 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;D6RC54;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 1 S(0.026)ES(0.023)ELIDELS(0.951)EDFDRSECK;SES(0.002)ELIDELS(0.997)EDFDRSECK;SESELIDELS(1)EDFDRSECK;SESELIDELS(1)EDFDRSECK;SESELIDELS(1)EDFDRSECK;SESELIDELS(1)EDFDRSECK 215.58 8.564699999999999e-19 496940000.0 1013740.0 965450.0 918040.0 829200.0 894950.0 844563.0 754421.0 872046.0 1124700.0 814446.0 True False 957505.8213594119 919068.3328300063 977218.327315936 908006.9186919298 965377.4734310512 839291.7690422623 830685.2371194279 869021.0759630662 920482.8313797566 807230.6420693989 1.1861613911295177 1.13854490269832 1.2105813089685995 1.124841986131972 1.1959128198555875 1.0397174305607035 1.029055630234627 1.0765461946975436 1.140297188198935 1.0 19.62262141389906 -6.263507485413663 24.999864537798146 1.0601531944873328 1.1690053028908327 0.6521275199335564 0.04161733239250388 122.28295001169526 1478182.7899062245 0.014112969606066634 0.013068492339305867 5.451205000189819e-07 6.263507485413663 0.1088521084034999 SESELIDELSEDFDR ddPTM_KYSE-520_SHP099_60min_R1 2 SESELIDELSEDFDR 15 0 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;D6RC54;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 0 ; 229.54 4.6137000000000003e-14 188577000.0 49821.0 59386.0 142402.0 28457.0 65207.0 55643.0 47677.0 42369.0 100833.0 70523.0 False True 47057.32981429879 56533.007419796675 151581.460771256 31161.54472409098 70338.41992292156 55295.71139727717 52496.656442679836 42222.03182799894 82524.26899307812 69898.2210860638 0.6732264295590351 0.8087903603467834 2.168602554056674 0.4458131300040184 1.0062977115871912 0.791088965328503 0.7510442415700697 0.6040501628219134 1.1806347530857504 1.0 16.092968118941698 SESELIDELSEDFDRS(ph)ECK ddPTM_KYSE-520_SHP099_60min_R1 2 SESELIDELSEDFDRSECK 19 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;D6RC54;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 1 SESELIDELS(0.003)EDFDRS(0.997)ECK;SESELIDELSEDFDRS(1)ECK 119.83 2.0596e-05 27782000.0 95341.0 91384.0 84027.0 84220.0 84716.0 71335.0 76409.0 96930.0 103001.0 91251.0 True False 90052.24467242844 86993.77546981952 89443.51486795356 92224.24347833374 91382.66723189558 70889.77180462523 84133.16739997746 96593.77245363212 84298.61484391056 90442.58713220379 0.9956840856486694 0.9618673926549338 0.9889535196202445 1.019699307622919 1.0103942194656335 0.783809641590666 0.9302383983885426 1.0680120451711193 0.9320677074472414 1.0 16.464714640871712 SESELIDELSEDFDRSECK ddPTM_KYSE-520_SHP099_60min_R1 2 SESELIDELSEDFDRSECK 19 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E7ES10;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;D6RC54;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 0 ; 199.76 4.1761e-13 262950000.0 160237.0 174688.0 132064.0 125633.0 125978.0 139437.0 106212.0 112584.0 151169.0 116527.0 False True 151348.33418545983 166295.72626796624 140577.05674987106 137573.12254706115 135891.7518832305 138566.7219614712 116948.94548922782 112193.47238130313 123720.5202603773 115494.66143663421 1.310435757833678 1.4398563898921326 1.2171736338393289 1.1911643433193682 1.1766063486647569 1.1997673332935428 1.0125917859276248 0.9714169554309463 1.071222848930175 1.0 16.81746664125654 -5.659966959921419 0.48832228197296 0.9863363639997229 1.4272885320936015 0.8000689421886541 0.06288786434704075 0.6180522158078958 0.2724046263116847 0.05376561603007665 0.13571780547979356 2.187928069918e-06 5.659966959921419 0.4409521680938786 SESGGLGVS(ph)MVEYVLSSS(ph)PGDSCLR ddPTM_KYSE-520_SHP099_60min_R1 1 SESGGLGVSMVEYVLSSSPGDSCLR 25 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 2 S(0.33)ES(0.33)GGLGVS(0.339)MVEYVLS(0.103)S(0.079)S(0.792)PGDS(0.025)CLR 92.95 9.4156e-06 0.0 4467.4 5977.0 4808.8 7317.2 7356.2 6421.6 5189.1 7122.8 6849.4 6412.4 True False 4219.584416458889 5689.855948340091 5118.782942352042 8012.624488003598 7935.091088947433 6381.52041242843 5713.664868735658 7098.092669274014 5605.7216193229315 6355.591124771708 0.6639169093198166 0.8952520444814597 0.8053984030534859 1.2607205735393199 1.248521330772747 1.0040797601903086 0.8989981823194916 1.1168265122670202 0.8820141996664848 1.0 12.633810599210337 -5.170214440638006 10.098391188350368 1.0625024429782557 0.797876071884736 0.4728887070163478 0.13074267125136613 0.4722212351916408 49.83936451368975 0.037359270913161255 0.06480197291494479 6.757492297807161e-06 5.170214440638006 -0.2646263710935197 SESGGLGVSMVEYVLSS(ph)SPADKLDSR ddPTM_KYSE-520_SHP099_60min_R1 1 SESGGLGVSMVEYVLSSSPADKLDSR 26 1 Q8TB72-4;Q8TB72-3;Q8TB72;C9JW01;A0A0A0MR59;Q8TB72-2 Q8TB72-4 PUM2 Pumilio homolog 2 1 SESGGLGVSMVEY(0.001)VLS(0.131)S(0.434)S(0.434)PADKLDSR 66.732 0.015531999999999999 19052000.0 53987.0 58267.0 44442.0 53782.0 42903.0 52722.0 38976.0 44014.0 67003.0 41811.0 True False 50992.23348958368 55467.76585944992 47306.80242971416 58893.42510985207 46279.22201532201 52392.94244176707 42916.07444910312 43861.325706944845 54836.944208178014 41440.58706846579 1.2304901329061098 1.3384889014195 1.1415572455949172 1.4211532527893893 1.1167607722077417 1.264290545768727 1.0356048860552967 1.0584146801414671 1.3232665868748317 1.0 15.338756820671527 -6.304920881508585 1.6154521715493118 1.1167815019271028 1.2699107261505704 0.24706517657095262 0.11810927949315676 0.5457021865338133 2.8288357525011185 0.04995742591861205 0.043946183996306336 4.955404586855071e-07 6.304920881508585 0.15312922422346764 SESGGLGVSMVEYVLSS(ph)SPGDSCLR ddPTM_KYSE-520_SHP099_60min_R1 1 SESGGLGVSMVEYVLSSSPGDSCLR 25 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 1 SESGGLGVSMVEYVLS(0.007)S(0.535)S(0.449)PGDS(0.009)CLR 68.375 0.016044 8443000.0 8697.8 9410.0 7823.3 9766.7 7044.0 10266.0 6388.3 7932.5 9482.8 6171.1 True False 8215.315695365565 8957.929475302044 8327.60243572258 10694.924231534571 7598.3227251224425 10201.926086020654 7034.09170779981 7904.984008959422 7760.962561934689 6116.428855043151 1.34315560436738 1.464568572217758 1.361513823357278 1.7485569578261888 1.2422808971050865 1.6679546722118588 1.150032457583484 1.2924182061631537 1.2688715500280163 1.0 12.578473849855426 -7.78154549696609 0.6651382034671038 1.013045484429377 1.4669370452111168 0.4152599394213278 0.16348507969350073 0.6636681110128599 0.6800999773270674 0.15311960617962955 0.06655625348954464 1.653691533919884e-08 7.78154549696609 0.45389156078173976 SESGGLGVSMVEYVLSSS(ph)PGDSCLR ddPTM_KYSE-520_SHP099_60min_R1 4 SESGGLGVSMVEYVLSSSPGDSCLR 25 0 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 1 SESGGLGVSMVEYVLS(0.006)S(0.171)S(0.823)PGDSCLR;SESGGLGVSMVEYVLS(0.006)S(0.163)S(0.83)PGDS(0.001)CLR;SESGGLGVSMVEYVLS(0.004)S(0.145)S(0.852)PGDSCLR;SESGGLGVSMVEYVLSS(0.14)S(0.859)PGDSCLR 157.73 5.2173e-08 419416000.0 212034.0 264446.0 206757.0 205148.0 176412.0 235476.0 173435.0 232810.0 302854.0 225826.0 True False 200272.05134069995 251741.61721846162 220084.88704289668 224645.20424000447 190294.62075302412 234006.30693861312 190967.50236248446 232002.43644826268 247863.3479280563 223825.3573299692 0.8947692689057284 1.1247234014121892 0.9832884426872232 1.0036628866354345 0.85019241350964 1.0454861313753423 0.8531986931264234 1.0365333008549098 1.1073961899797156 1.0 17.77201396393194 -7.504381876098934 24.64345399506589 1.0597870087759091 0.9701088900998619 0.16956569107812303 0.08393573821074189 1018.3853558800935 1356809.3462275898 0.045705969403671574 0.02129523684244453 3.1305318301749754e-08 7.504381876098934 -0.08967811867604725 SESGGLGVSMVEYVLSSS(ph)PGDSCLRK ddPTM_KYSE-520_SHP099_60min_R1 1 SESGGLGVSMVEYVLSSSPGDSCLRK 26 1 Q5T1Z4;Q5T1Z8;Q14671-2;Q14671;Q14671-3;H0YEH2 Q5T1Z4 PUM1 Pumilio homolog 1 1 SESGGLGVSMVEYVLS(0.001)S(0.212)S(0.786)PGDS(0.001)CLRK 121.02 0.00016427 412580000.0 116390.0 174870.0 153490.0 114470.0 117580.0 111590.0 100590.0 97815.0 166970.0 88173.0 True False 109933.61468228736 166468.98271477886 163384.2109926832 125349.19438333964 126832.87706131423 110893.52541779114 110758.61886379511 97475.7025951925 136652.4569711725 87391.85581755596 1.2579388966380438 1.9048569361235292 1.869558775977627 1.4343349641759011 1.4513123205221492 1.2689228805175914 1.2673791834220902 1.1153865733059627 1.5636749636768863 1.0 16.415211218553498 -5.769833671786096 1.7009345154485496 1.2545513987976997 1.68909939398671 0.40375162024104017 0.21842269957000843 0.34746572036134016 2.08081441614187 0.07677129436142438 0.1018080084420682 1.6988941786421018e-06 5.769833671786096 0.4345479951890103 SESLIDASEDS(ph)QLEAAIR ddPTM_KYSE-520_SHP099_60min_R1 2 SESLIDASEDSQLEAAIR 18 0 C9JAT7;O94888 C9JAT7 UBXN7 UBX domain-containing protein 7 1 SESLIDAS(0.026)EDS(0.974)QLEAAIR;SESLIDAS(0.01)EDS(0.99)QLEAAIR 321.63 6.768e-48 487640000.0 350530.0 314100.0 281880.0 208130.0 215539.0 315540.0 227340.0 344010.0 359880.0 318340.0 True False 331085.40213576925 299010.1645262879 300050.4358239467 227910.61262343396 232500.69305084678 313570.5978163803 250321.7458245867 342816.7096025376 294534.86383653135 315519.75526477245 1.0493333511175384 0.9476749380569519 0.9509719465019094 0.7223338913665797 0.7368815713480154 0.9938223917334226 0.7933631465152665 1.0865142479426007 0.9334910379521835 1.0 18.26737081222865 -7.2641421801138835 24.99530314362629 1.0075019776681287 0.8821087872120148 0.21163605226306048 0.10759025950534448 402.6645764902758 3723763.268841273 0.05857270481725343 0.030084262952135912 5.4432442175437645e-08 7.2641421801138835 -0.12539319045611386 SESPKEPEQLR ddPTM_KYSE-520_SHP099_60min_R1 2 SESPKEPEQLR 11 1 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ; 164.9 1.9079e-05 1715990000.0 1627450.0 1422900.0 1165630.0 1124570.0 1500700.0 1431470.0 1099430.0 1333100.0 1367280.0 1201900.0 False True 1537172.104258857 1354541.7481835585 1240768.3748739425 1231448.794685702 1618796.5521850171 1422535.6647531635 1210571.1138027885 1328475.7872478797 1119016.4183239194 1191252.101064051 1.2903835408859494 1.1370739635830684 1.0415665783637758 1.0337432299894762 1.3589034182933022 1.1941516522678324 1.0162174007680502 1.115192817759782 0.9393615485121838 1.0 20.184047328006727 -6.764654484226063 24.942824562122716 1.0272923154006346 1.169943385924308 0.3657716158564933 0.10160467707394952 109.14485246813497 846730.8784349506 0.04384368854436389 0.030954465668191516 1.7192756636189685e-07 6.764654484226063 0.14265107052367343 SESPKEPEQLRK ddPTM_KYSE-520_SHP099_60min_R1 1 SESPKEPEQLRK 12 2 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8W646 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 131.06 4.2275e-05 4392400000.0 8152500.0 8143700.0 5685700.0 4389400.0 8111800.0 7161100.0 4523000.0 5805600.0 6810000.0 5579200.0 False True 7700264.573394166 7752464.428057085 6052209.319441649 4806567.2562787635 8750152.510171533 7116404.918624822 4980228.980226127 5785461.728637226 5573475.66612975 5529772.628551912 1.3925101610209685 1.401949944203625 1.0944770655111997 0.8692160743573765 1.5823711204673792 1.2869254120649811 0.9006209323167608 1.0462386281065361 1.0079032250534472 1.0 22.39878873072369 -6.752303977403147 24.991614612604916 0.9925439112213957 1.2650165637379847 0.36448897318763407 0.18263776745519297 239.25283616511274 654522.384236847 0.07501490941719559 0.057268524568125555 1.7688704326557247e-07 6.752303977403147 0.2724726525165889 SESQESLVT(ph)SPSKPK ddPTM_KYSE-520_SHP099_60min_R1 1 SESQESLVTSPSKPK 15 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 SESQESLVT(0.632)S(0.368)PSKPK 174.02 6.1088e-08 2799400000.0 932530.0 904380.0 714290.0 615880.0 580730.0 839670.0 671800.0 815390.0 878150.0 909520.0 True False 880800.7019475335 860932.2272979437 760334.276304408 674413.0500289256 626430.147098291 834429.3080702279 739712.1001361737 812561.6024034575 718700.096360037 901462.3603958518 0.9770798434232515 0.9550395725007194 0.8434453946258262 0.7481322345314297 0.694904384940944 0.9256396547758375 0.8205690360841577 0.9013816195793732 0.7972602384024554 1.0 19.781907729151666 -4.75322211156177 4.489841302655891 0.8308486826230665 0.9706422433120235 0.2598518866844497 0.08318648834010713 0.23186429193915134 11.319062760761245 0.021715897642974703 0.05600467814258317 1.76513484552604e-05 4.75322211156177 0.13979356068895699 SESQESLVTS(ph)PSKPK ddPTM_KYSE-520_SHP099_60min_R1 5 SESQESLVTSPSKPK 15 1 E7EWD6;Q76L83;Q76L83-2;A0A5F9ZHN2 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 SESQESLVT(0.043)S(0.955)PS(0.002)KPK;SESQESLVT(0.065)S(0.933)PS(0.002)KPK;SESQESLVT(0.05)S(0.949)PS(0.001)KPK;SESQESLVT(0.05)S(0.936)PS(0.014)KPK;SESQESLVT(0.204)S(0.793)PS(0.003)KPK 295.43 4.357399999999999e-33 6909770000.0 3454750.0 3677890.0 2947090.0 2546650.0 2353454.0 3441910.0 2748880.0 3316210.0 3937270.0 3571020.0 True False 3263108.130626615 3501198.6437745565 3137064.1369107226 2788682.850321757 2538657.4404784637 3420427.7629783093 3026763.6168834805 3304706.8415192324 3222361.018499663 3539383.541011523 0.9219425057545612 0.9892114271328578 0.8863306563306724 0.7879007228260935 0.7172597744953458 0.9663908201372217 0.8551668904519061 0.9336956007245198 0.9104300173071218 1.0 21.755066675459627 -9.562650460980523 8.793047474010669 1.0000071496961547 0.8835570915845014 0.1635021749477895 0.0776867841082116 0.0 0.0 0.08100865068055037 0.019647483726157246 2.7374710752663976e-10 9.562650460980523 -0.11645005811165332 SEST(ph)Y(ph)S(ph)VNSTGRR ddPTM_KYSE-520_SHP099_60min_R1 1 SESTYSVNSTGRR 13 1 Q68EN5-2;Q68EN5 Q68EN5-2 KIAA0895L Uncharacterized protein KIAA0895-like 3 S(0.022)ES(0.593)T(0.679)Y(0.921)S(0.779)VNS(0.003)T(0.003)GRR 60.937 0.017515 16002000.0 89767.0 92753.0 64945.0 61140.0 83555.0 90820.0 69529.0 82519.0 97455.0 82925.0 True False 84787.445563922 88297.00665490856 69131.45861567401 66950.72721758876 90130.30313708207 90253.15869203144 76557.66985764813 82232.76084907942 79759.62864062774 82190.34901467375 1.0315985584729004 1.0742989622679977 0.841114065634783 0.8145813714166831 1.0966044580366823 1.0980992266612497 0.9314678764045643 1.0005160196411638 0.9704257202556466 1.0 16.32668137873501 SESVEGFLS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 10 SESVEGFLSPSR 12 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 SESVEGFLS(1)PSR;SESVEGFLS(0.795)PS(0.205)R;SESVEGFLS(0.978)PS(0.022)R;SESVEGFLS(0.97)PS(0.03)R;SESVEGFLS(0.756)PS(0.244)R;SESVEGFLS(0.975)PS(0.025)R;SESVEGFLS(0.992)PS(0.008)R;SESVEGFLS(0.997)PS(0.003)R;SESVEGFLS(0.992)PS(0.008)R;SESVEGFLS(0.998)PS(0.002)R 243.3 2.0857e-15 5354520000.0 4502880.0 4546030.0 3849300.0 3285420.0 3520530.0 3892580.0 3479249.0 4004290.0 4848500.0 4216790.0 True False 4253096.270131268 4327631.895069857 4097432.0370977633 3597665.3290024544 3797575.6819243785 3868284.9643407646 3830965.443118009 3990400.0525983097 3968134.6207386395 4179432.521212974 1.0176252992587889 1.0354592096186952 0.9803799956814682 0.8608023483432922 0.9086342853125497 0.925552678433505 0.9166233510587146 0.9547707810437857 0.9494433994562949 1.0 21.994875637369482 -5.010302818619195 6.472012331087762 0.9265931045778867 1.0227673428049926 0.5594801804506977 0.03414015830614845 0.09783577763639596 19.561613826289168 0.009185488994811057 0.01759717893038317 9.765560645221192e-06 5.010302818619195 0.09617423822710591 SESVVSGLDS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 8 SESVVSGLDSPAK 13 0 O14578-4;H7BYJ3;O14578;O14578-2 O14578-4 CIT Citron Rho-interacting kinase 1 SESVVS(0.006)GLDS(0.994)PAK;SESVVSGLDS(1)PAK;SESVVS(0.004)GLDS(0.996)PAK;SESVVSGLDS(1)PAK;SESVVSGLDS(1)PAK;SESVVSGLDS(1)PAK;SESVVSGLDS(1)PAK;SESVVSGLDS(1)PAK 194.13 1.9001e-08 12705430000.0 13898360.0 15973290.0 11391910.0 9795070.0 10238480.0 14278050.0 11136070.0 13284250.0 15766180.0 14501160.0 True False 13127390.26510622 15205909.172002912 12126250.746300463 10725990.50780481 11044190.127017552 14188935.39377627 12261812.633169731 13238170.037317256 12903439.145054579 14372691.004131772 0.9133564661852425 1.0579723148317606 0.8437007894217223 0.7462757325487182 0.7684149143568617 0.9872149474094533 0.8531326965593835 0.9210641231702281 0.8977747550090083 1.0 23.776826867610904 -8.516203330024565 0.8398137412480602 1.000423124352214 0.8809914778425482 0.13237836239031686 0.0881147230933207 4.133543978608241 4.566207727746654 0.09981451714485741 0.032367825757460694 3.0464683458692958e-09 8.516203330024565 -0.11943164650966576 SESVVY(ph)ADIR ddPTM_KYSE-520_SHP099_60min_R1 2 SESVVYADIR 10 0 O95297-4;O95297-2;O95297;O95297-5 O95297-4 MPZL1 Myelin protein zero-like protein 1 1 SESVVY(1)ADIR;SES(0.199)VVY(0.801)ADIR 121.05 0.0020442 653560000.0 662960.0 718680.0 681100.0 654300.0 914290.0 763170.0 789160.0 987970.0 1312780.0 841580.0 True False 626184.2872220044 684153.5340393268 725004.7957985306 716484.4752775319 986239.4214015041 758406.7729464624 868935.9942593961 984542.9626639306 1074412.244490724 834124.2559393323 0.7507086417440763 0.8202057776978096 0.8691808092573462 0.8589661194670298 1.1823651145246583 0.9092251754415148 1.0417344754959335 1.1803312943527908 1.2880721749073178 1.0 19.669902786253942 -5.485245980025313 0.5867279755097203 1.1484835766671788 0.7130041182952462 0.6056203034088439 0.10680298289555237 0.8393212198351739 0.5314770725543019 0.07355032262662044 0.21030631085933282 3.2715534489762007e-06 5.485245980025313 -0.4354794583719326 SET(ph)PPHWR ddPTM_KYSE-520_SHP099_60min_R1 2 SETPPHWR 8 0 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 SET(1)PPHWR;S(0.013)ET(0.987)PPHWR 137.05 0.00091681 1765060000.0 1130870.0 975020.0 907570.0 910560.0 1000270.0 1006270.0 891140.0 908380.0 1102060.0 874120.0 True False 1068138.3867665457 928178.5756651432 966073.4143633416 997099.3486301533 1078985.5582422237 999989.4956730959 981225.1278882842 905229.0417974858 901953.6846718009 866375.9768550682 1.2328808915545788 1.0713346173729534 1.115074101973803 1.1508852683676767 1.245401058047483 1.1542211723171767 1.1325627142272765 1.0448455012377578 1.0410649749845087 1.0 19.724633714436884 -7.270028596905861 2.147421378927459 1.0207077576108194 1.1587490590205691 0.6057973951663382 0.04839300066618184 0.2528407055505102 2.1989176181543497 0.03580933301484371 0.014772908148655306 5.36996435704261e-08 7.270028596905861 0.13804130140974968 SET(ph)PPVPPPPPYLASYPGFPENGAPGPPISR ddPTM_KYSE-520_SHP099_60min_R1 1 SETPPVPPPPPYLASYPGFPENGAPGPPISR 31 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 S(0.204)ET(0.796)PPVPPPPPYLASYPGFPENGAPGPPISR 90.435 0.0039837 132920000.0 232420.0 361410.0 228680.0 210840.0 211220.0 248610.0 216540.0 267070.0 295380.0 273190.0 True False 219527.19928221672 344047.32111253025 243421.07870093654 230878.17020864264 227841.81232259527 247058.332772803 238429.97642674414 266143.5965046066 241746.43792384866 270769.74913860374 0.8107523088550169 1.270626878397766 0.8989965809523731 0.8526734280440571 0.841459627773876 0.9124295958420999 0.8805635680693958 0.9829148099124283 0.8928118399227145 1.0 18.04670704198506 SETAPAAPAAPAPAEKT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 12 SETAPAAPAAPAPAEKTPVK 20 1 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK;SETAPAAPAAPAPAEKT(1)PVK 223.12 1.3708e-18 22125050000.0 12377600.0 14368700.0 10768570.0 8531450.0 8157730.0 13263600.0 10784720.0 12308270.0 12846070.0 15286400.0 True False 11690989.853866119 13678406.08414159 11462729.25252121 9342276.442926023 8799696.939865582 13180816.952517381 11874944.74632419 12265575.48414182 10513547.511071865 15150974.388639247 0.771632870202226 0.9028070230518083 0.7565671328120244 0.6166122523401005 0.5808007270122452 0.8699649682201851 0.783774326437279 0.8095568753214312 0.6939189019390928 1.0 23.852907243418255 -10.391345889792754 8.567766708593897 1.0000014927777174 0.7552055452118898 0.37091812639001753 0.0961140306022903 2.9618402555850742e-06 2.103412528758138e-07 0.10057365631085789 0.024392545772155324 4.0611975003639606e-11 10.391345889792754 -0.24479594756582768 SETAPAAPAAPAPAEKT(ph)PVKK ddPTM_KYSE-520_SHP099_60min_R1 4 SETAPAAPAAPAPAEKTPVKK 21 2 P10412 P10412 HIST1H1E Histone H1.4 1 SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK;SETAPAAPAAPAPAEKT(1)PVKK 130.65 3.8243e-07 9425380000.0 5526220.0 5243710.0 4075260.0 3463928.0 3321756.0 5227550.0 4289260.0 4975100.0 5579330.0 6808570.0 True False 5219669.560353544 4991794.300630829 4337957.780246545 3793138.675652073 3583159.2989937305 5194922.921388782 4722860.259943554 4957842.539297063 4566264.315463694 6748251.366787312 0.7734847557758521 0.7397167101982611 0.6428269405607141 0.5620920842280213 0.530975967586043 0.7698176370483908 0.6998643060612605 0.7346855162654349 0.676658895360264 1.0 22.686082283148718 -9.53612686350563 0.5273723721577352 1.0559465453722243 0.6660237287183257 0.60245228600436 0.07792985897549258 7.642478885997409 1.7686768006829956 0.8686623856803289 0.04000955803783505 2.909866980971682e-10 9.53612686350563 -0.3899228166538986 SETELKDTYAR ddPTM_KYSE-520_SHP099_60min_R1 1 SETELKDTYAR 11 1 Q13200;Q13200-3;Q13200-2;H7C1H2 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 108.56 0.00048508 446440000.0 598120.0 630730.0 379950.0 329390.0 560250.0 548350.0 382820.0 414460.0 479220.0 422310.0 False True 564941.0912773402 600428.7840549685 404442.1849414946 360695.1265652852 604338.4876135498 544927.5442498953 421519.1815631585 413022.33499569114 392205.7281531138 418568.661952208 1.3496975350291394 1.4344809791888464 0.9662505144440882 0.8617346670985828 1.4438216296339763 1.301883284114841 1.0070490695533423 0.9867493019409319 0.9370164654082386 1.0 18.675104776143737 -1.0000000000000002 0.28047954607440945 1.0064690995855636 3.789995070802317 0.2549021270940022 0.18464031947662804 84.78517887389764 1.1957959466188168 0.22651323236050433 115.74141932879247 0.09999999999999995 1.0000000000000002 2.7835259712167533 SETILS(ph)PPPEKR ddPTM_KYSE-520_SHP099_60min_R1 4 SETILSPPPEKR 12 1 Q9P0M6 Q9P0M6 H2AFY2 Core histone macro-H2A.2 1 SETILS(1)PPPEKR;SETILS(1)PPPEKR;SETILS(1)PPPEKR;SET(0.002)ILS(0.998)PPPEKR 149.3 2.1831999999999997e-05 1756820000.0 2372290.0 2064290.0 1863010.0 1793690.0 2011000.0 2053870.0 1986200.0 2179040.0 2508470.0 2040650.0 True False 2240694.344657128 1965118.4098375393 1983102.6055213953 1964161.7583074379 2169254.258975192 2041051.0354856085 2186984.479443979 2171481.4188317577 2052995.0813827496 2022571.428601678 1.1078443574209151 0.9715940718079562 0.9804858199210449 0.9711210840476363 1.0725229419832774 1.009136689376012 1.081289119641114 1.0736240946175286 1.0150420659319337 1.0 20.947759222718492 -5.765963029320116 24.999942978198675 1.045944729604527 1.003229707164674 0.11282692627478386 0.04542663448827185 206.41249427821367 1140738.6577406821 0.013761895423673372 0.016134316170614286 1.7141032197103739e-06 5.765963029320116 -0.04271502243985292 SETIQDTDTQSLVGS(ph)PSTR ddPTM_KYSE-520_SHP099_60min_R1 1 SETIQDTDTQSLVGSPSTR 19 0 Q9NZN5;E9PMR6;Q9NZN5-2 Q9NZN5;Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 SETIQDTDTQSLVGS(0.988)PS(0.006)T(0.006)R 228.58 2.5801e-16 0.0 231440.0 215370.0 182850.0 187390.0 177990.0 224000.0 201130.0 255410.0 325340.0 205940.0 True False 218601.561835798 205023.30192303957 194636.8035703443 205199.4892591421 191996.8003754323 222601.93291141884 221462.18323963758 254524.04232314188 266266.4571539873 204115.53181889554 1.0709697585863058 1.0044473347817033 0.9535619452175673 1.0053105093502062 0.9406280779543236 1.090568321419683 1.0849844755377709 1.2469606798417086 1.3044889567259197 1.0 17.63902644037206 -6.828385785038223 1.9036918356451646 1.2013093147065743 0.9967132191701199 0.45701147456132085 0.08421872532528984 0.26713734390044336 1.971071676832365 0.04389077315198924 0.026195024369176343 1.4846162674682566e-07 6.828385785038223 -0.20459609553645441 SETSWES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SETSWESPK 9 0 Q86UE4;E5RJU9 Q86UE4 MTDH Protein LYRIC 1 SETSWES(1)PK;SETSWES(1)PK 234.39 3.1437e-13 1573450000.0 2117100.0 2486000.0 1868560.0 2374100.0 2171500.0 1914800.0 1984520.0 2286900.0 3196300.0 1680670.0 True False 1999660.242665783 2366568.8284379262 1989010.3674017082 2599733.7502008104 2342384.69585511 1902849.0229410029 2185134.648648761 2278967.2776664724 2615932.4921660107 1665780.5713414738 1.2004343651669749 1.4206966206431972 1.1940410409517104 1.5606699915506954 1.4061784223889455 1.142316734675693 1.3117782055106124 1.3681077309187197 1.5703944067851432 1.0 20.6677669403236 SEVDMLK ddPTM_KYSE-520_SHP099_60min_R1 4 SEVDMLK 7 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 0 ;;; 121.52 0.01859 1768110000.0 4502170.0 5607220.0 3129240.0 2538960.0 3947740.0 5166060.0 3434700.0 3894290.0 4008660.0 4715060.0 False True 4252425.655246613 5337840.734591189 3330955.817361028 2780261.9950338425 4258404.678431986 5133816.703287339 3781912.9954416677 3880781.6169241206 3280788.394095111 4673288.236661173 0.9099429437899927 1.1422023346894614 0.71276489886291 0.5949262819320981 0.9112223476877599 1.0985448453646398 0.8092616598679246 0.8304177744655317 0.7020299686113664 1.0 22.156006591071613 SEVLS(ph)ESSELLQQELEELRK ddPTM_KYSE-520_SHP099_60min_R1 1 SEVLSESSELLQQELEELRK 20 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 SEVLS(0.995)ES(0.002)S(0.002)ELLQQELEELRK 117.4 4.7597e-05 8610800.0 2960.7 3933.4 2479.5 3858.4 1886.9 3752.2 2354.5 3123.8 4142.9 3597.7 True False 2796.4640689908724 3744.433559846233 2639.33253734027 4225.101175929741 2035.3882950075997 3728.7811279920807 2592.515837705596 3112.964266900403 3390.6537940101257 3565.827176968244 0.7842399337391601 1.0500883452881877 0.7401739922752781 1.1848866942345837 0.5708039660907341 1.0456987798164643 0.727044724559483 0.872999198336674 0.9508744046571951 1.0 11.800021066993233 -7.920841131327874 3.5687223903773355 0.9982589408809012 0.8750300775430383 0.0576893395627478 0.17226640275460345 0.6444930911408092 15.883164175942458 0.15032044449490442 0.039929588467209065 1.199938170619425e-08 7.920841131327874 -0.12322886333786287 SEVLSES(ph)SELLQQELEELRK ddPTM_KYSE-520_SHP099_60min_R1 3 SEVLSESSELLQQELEELRK 20 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 SEVLS(0.001)ES(0.954)S(0.046)ELLQQELEELRK;SEVLS(0.006)ES(0.834)S(0.16)ELLQQELEELRK;SEVLSES(0.981)S(0.019)ELLQQELEELRK 208.65 8.463999999999999e-19 129639000.0 53875.0 59932.0 55861.0 50238.0 50100.0 67156.0 41663.0 58672.0 73558.0 68285.0 True False 50886.446352850144 57052.77676023396 59461.88944076014 55012.60441539451 54042.584969993535 66736.85449374664 45874.702631696 58468.48052614778 60201.7214462808 67680.04802492616 0.7518677636592245 0.8429777818600507 0.8785733931344238 0.8128334128122028 0.7985009843682436 0.9860639352555992 0.6778172293081207 0.8638953758515979 0.88950470933633 1.0 16.046442971726258 -8.061962200043677 2.1785727239203814 0.9988186067171592 0.8274133462719503 0.3310466863203301 0.0762631373019774 0.4326506478953212 4.635016612524729 0.07023523316383343 0.019391536011678374 8.670373373369482e-09 8.061962200043677 -0.17140526044520887 SEVPEDLAGFIELFQT(ph)PSHTK ddPTM_KYSE-520_SHP099_60min_R1 2 SEVPEDLAGFIELFQTPSHTK 21 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 SEVPEDLAGFIELFQT(0.964)PS(0.029)HT(0.007)K;SEVPEDLAGFIELFQT(0.997)PS(0.003)HTK 233.83 3.2605e-26 118232000.0 158772.0 170763.0 140611.0 144486.0 112241.0 137918.0 125872.0 186589.0 201800.0 181645.0 True False 149964.60065586472 162559.2891595113 149675.01004555463 158217.90599870007 121073.72813606875 137057.20260391556 138596.3701523377 185941.7663091999 165158.2069640214 180035.76661767167 0.8329711560832975 0.9029277471555203 0.8313626389772212 0.878813743352983 0.672498195279074 0.7612776348767052 0.769826866939525 1.0328045910125756 0.9173633110067256 1.0 17.457924020969777 -7.258677777804088 24.99925471006016 0.9813129676017988 0.8075351477626278 0.5957228238271067 0.06654467409337794 183.80137626712553 1663869.9297539429 0.03568394166342983 0.019407135735995076 5.512165165267105e-08 7.258677777804088 -0.17377781983917095 SEVQAIIEST(ph)PELDMDKDLSGYK ddPTM_KYSE-520_SHP099_60min_R1 2 SEVQAIIESTPELDMDKDLSGYK 23 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SEVQAIIES(0.205)T(0.795)PELDMDKDLSGYK;SEVQAIIES(0.204)T(0.796)PELDMDKDLSGYK 221.69 1.2312999999999999e-20 792130000.0 783750.0 839270.0 572840.0 656880.0 656820.0 975210.0 735900.0 926350.0 953660.0 922390.0 True False 740273.8251331105 798950.2094300468 609766.1829764064 719309.6777018273 708507.9972054121 969123.3526542182 810291.9536918877 923136.7080617147 780499.3838122322 914218.34220856 0.809734164099972 0.8739161888832273 0.6669809112594909 0.786802938086022 0.7749877294014964 1.0600567806515664 0.8863221358416329 1.0097551814937444 0.853734111182575 1.0 19.802179238847877 -6.239885554877461 24.511186368318384 0.9578551195605968 0.7813869667177964 0.6010580668507193 0.07307352137938007 438.23234868104004 498361.49257962615 0.023379526313301 0.023356971376029295 5.755915970401055e-07 6.239885554877461 -0.17646815284280037 SEVQAIIESTPELDMDKDLS(ph)GYK ddPTM_KYSE-520_SHP099_60min_R1 2 SEVQAIIESTPELDMDKDLSGYK 23 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SEVQAIIESTPELDMDKDLS(1)GYK;SEVQAIIESTPELDMDKDLS(1)GYK 146.1 4.3369999999999997e-07 343960000.0 402690.0 348000.0 258730.0 381360.0 403170.0 370430.0 403920.0 456730.0 437980.0 387840.0 True False 380351.98295738694 331281.5576413508 275408.14978263696 417604.33973993553 434897.18527649326 368118.0089659682 444752.17547931365 455145.7102315838 358453.87257731473 384404.03933495365 0.9894588610864312 0.8618056100932016 0.7164548797643039 1.0863682402048136 1.1313543583696373 0.9576330404925988 1.1569914204043397 1.184029468106054 0.9324924711963627 1.0 18.552263970532575 -5.28509080538775 24.720715293440247 1.0740256579387921 0.856496364524046 0.47768197752643093 0.0993984915389595 531.9107578747117 555957.4413762214 0.027914591482242474 0.04143221027408974 5.186915758561499e-06 5.28509080538775 -0.21752929341474614 SEVQAIIESTPELDMDKDLS(ph)GYKGS(ph)STPTK ddPTM_KYSE-520_SHP099_60min_R1 2 SEVQAIIESTPELDMDKDLSGYKGSSTPTK 30 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 SEVQAIIESTPELDMDKDLS(0.992)GY(0.028)KGS(0.392)S(0.34)T(0.222)PT(0.026)K;SEVQAIIESTPELDMDKDLS(0.76)GY(0.298)KGS(0.364)S(0.329)T(0.226)PT(0.023)K 164.1 2.9248e-10 565950000.0 945820.0 925220.0 801170.0 870740.0 880870.0 844030.0 867610.0 906620.0 1026510.0 952730.0 True False 893353.4791545736 880771.0424164658 852814.7001173233 953494.8678024722 950189.4575352939 838762.095692969 955316.4858576139 903475.1468266994 840121.6602112855 944289.5534127237 0.9460588396069153 0.9327340742395192 0.9031283858168245 1.0097484022315824 1.006247981989473 0.8882467169753476 1.0116774906648476 0.9567776574054871 0.8896864920034657 1.0 19.84886978446817 -5.239515384624583 24.860996677387824 0.9645876764806394 0.9278498023915436 0.13729024870240225 0.04439848792004891 1673.0114698920424 1897129.5255201608 0.012064977844460586 0.02087573472377143 5.760824108204757e-06 5.239515384624583 -0.03673787408909579 SEVQAIIESTPELDMDKDLS(ph)GYKGSS(ph)TPTK ddPTM_KYSE-520_SHP099_60min_R1 1 SEVQAIIESTPELDMDKDLSGYKGSSTPTK 30 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 2 SEVQAIIESTPELDMDKDLS(0.481)GY(0.427)KGS(0.309)S(0.377)T(0.377)PT(0.029)K 63.138000000000005 0.017827000000000003 32205000.0 64808.0 70889.0 61813.0 67326.0 64729.0 66755.0 61411.0 77698.0 82487.0 67262.0 True False 61212.97104845499 67483.38603344177 65797.56488429688 73724.64279769994 69822.80404236958 66338.3572834901 67619.02319360292 77428.48377284955 67509.44012805365 66666.11100904422 0.9182022188177522 1.0122592275449616 0.986971699539673 1.1058788593157642 1.0473507901622925 0.995083653139604 1.01429380190528 1.1614369370120488 1.0126500422215272 1.0 16.0246659489981 -3.8964271351095454 1.0176322622912766 1.0497230816977359 0.7564564345748319 0.3450343741075388 0.05147530086490107 4.002760254653193 2.0355146794510697 0.016600151304723944 1.5211594086888323 0.00012693250909116477 3.8964271351095454 -0.29326664712290396 SEVQAIIESTPELDMDKDLS(ph)GYKGSSTPTK ddPTM_KYSE-520_SHP099_60min_R1 1 SEVQAIIESTPELDMDKDLSGYKGSSTPTK 30 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SEVQAIIESTPELDMDKDLS(0.256)GY(0.005)KGS(0.256)S(0.256)T(0.194)PT(0.033)K 114.52 0.00019707 1110500000.0 901020.0 1270200.0 884230.0 612640.0 630090.0 851450.0 537100.0 656840.0 1148600.0 752010.0 True False 851038.624461161 1209177.6853909297 941228.8806180235 670865.1214030683 679674.4982783076 846135.7847206598 591395.3095908583 654561.575347608 940043.1938497274 745347.7764549274 1.141800715511526 1.6222999834280059 1.2628049755441129 0.9000699305683604 0.9118890801700927 1.1352227932376844 0.7934488144630846 0.8781961871019153 1.2612141922805797 1.0 19.50755421315891 -5.110941729055594 4.483119988584079 0.9746992350375212 1.3950094123262309 0.4994826925523489 0.16681101580273855 0.16397443341503823 5.317645046331856 0.044203192428114185 0.08054073100856068 7.745657172625159e-06 5.110941729055594 0.4203101772887097 SEVQAIIESTPELDMDKDLSGYKGSST(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 1 SEVQAIIESTPELDMDKDLSGYKGSSTPTK 30 2 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;H0YBE9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SEVQAIIESTPELDMDKDLS(0.095)GYKGS(0.27)S(0.27)T(0.356)PT(0.009)K 155.28 2.9566e-07 1002700000.0 771320.0 1049100.0 721400.0 535790.0 564780.0 769280.0 431560.0 554930.0 1063200.0 642480.0 True False 728533.3420117007 998699.6612687948 767902.5982808112 586711.3205088624 609224.9728413763 764478.638170072 475186.2964197187 553005.0773516356 870149.6810909188 636788.1270418764 1.144074945925917 1.5683390108231687 1.2058996794554124 0.9213603325714631 0.9567153452930389 1.2005227574222632 0.7462235494671362 0.8684286874514369 1.3664665595024452 1.0 19.28045391142156 -5.0357707365048805 5.224378079707437 1.0006657515907922 1.3651572537333885 0.35996643036178333 0.18843601057168477 0.18024988390222088 12.908520951964052 0.05009529021657531 0.09370041995450289 9.209356041679039e-06 5.0357707365048805 0.3644915021425963 SEVQQPVHPKPLS(ph)PDSR ddPTM_KYSE-520_SHP099_60min_R1 16 SEVQQPVHPKPLSPDSR 17 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 SEVQQPVHPKPLS(0.991)PDS(0.009)R;SEVQQPVHPKPLS(0.998)PDS(0.002)R;SEVQQPVHPKPLS(0.992)PDS(0.008)R;SEVQQPVHPKPLS(0.998)PDS(0.002)R;SEVQQPVHPKPLS(0.999)PDS(0.001)R;SEVQQPVHPKPLS(0.849)PDS(0.151)R;SEVQQPVHPKPLS(0.997)PDS(0.003)R;SEVQQPVHPKPLS(0.999)PDS(0.001)R;SEVQQPVHPKPLS(1)PDSR;SEVQQPVHPKPLS(1)PDSR;SEVQQPVHPKPLS(0.992)PDS(0.008)R;SEVQQPVHPKPLS(0.986)PDS(0.014)R;SEVQQPVHPKPLS(0.972)PDS(0.028)R;SEVQQPVHPKPLS(1)PDSR;SEVQQPVHPKPLS(0.998)PDS(0.002)R;SEVQQPVHPKPLS(0.85)PDS(0.15)R 231.63 1.2657999999999998e-19 405378090000.0 90454970.0 83770000.0 82384130.0 82263310.0 83289620.0 81880650.0 78015320.0 85011180.0 99906400.0 80739920.0 True False 85437252.49658786 79745563.4586665 87694742.83906867 90081590.24903408 89844039.24088758 81369602.49126515 85901869.90174995 84716296.05833866 81765916.19539289 80024627.12350723 1.0676369958553755 0.9965127776926717 1.0958469410138412 1.125673351904599 1.122704878114901 1.016807018240549 1.073442926127878 1.058627813755264 1.0217594150010623 1.0 26.253940713729094 -7.830214478000072 1.0951606307277755 0.9987961014913219 1.0735577855872327 0.2843188149312321 0.038476132991627596 0.6935834574477576 1.7988402489501003 0.03950090715211922 0.013090371371649779 1.4783781051438246e-08 7.830214478000072 0.07476168409591077 SEVQQPVHPKPLSPDS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SEVQQPVHPKPLSPDSR 17 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3;F8VRN8 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 SEVQQPVHPKPLS(0.47)PDS(0.53)R 265.6 2.2151e-29 3332200000.0 2315400.0 1874200.0 1985300.0 1680700.0 1858500.0 1998900.0 1874100.0 1993500.0 2280400.0 1931600.0 True False 2186960.146364531 1784160.618768445 2113275.6145923133 1840433.2226791175 2004753.3765814973 1986424.1236456942 2063552.3174534126 1986585.0137863993 1866336.8442059157 1914487.526762062 1.1423214389196346 0.9319259560734582 1.1038335768979692 0.9613189937005276 1.0471488315058914 1.0375748579596638 1.0778614582793657 1.0376588961884095 0.9748493098633123 1.0 20.868526830119645 -7.893807293076067 0.005238671287703241 6.296466587987549e-05 2.0435252489609677 0.06591739595454538 0.06037560566129456 19081.167664053293 73.93307599549395 14497.73244309811 14335.632676852158 1.2770053211389779e-08 7.893807293076067 2.043462284295088 SEWELKT(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 4 SEWELKTPEK 10 1 A0A087WTW5;Q9UKL3 A0A087WTW5 CASP8AP2 CASP8-associated protein 2 1 SEWELKT(1)PEK;SEWELKT(1)PEK;SEWELKT(1)PEK;SEWELKT(1)PEK 154.47 0.00032324 3158010000.0 4662060.0 4322180.0 3882560.0 3819560.0 4121510.0 3855970.0 4224410.0 4606270.0 4860800.0 4464830.0 True False 4403446.238213796 4114535.985075552 4132836.0299156383 4182569.834007411 4445849.388815924 3831903.4609305565 4651454.589068547 4590291.9244815055 3978201.250796404 4425275.0797851775 0.9950672351033959 0.9297808409404664 0.9339161872206743 0.9451547663361193 1.0046492723412224 0.8659130544075859 1.0511108360961707 1.0372896241976304 0.8989726466878809 1.0 22.077335706758717 -6.783891279330438 24.999367391602636 0.9999507038059046 0.9471338131924224 0.1877543132841729 0.05185590521104486 404.9055514004647 450843.0211405191 0.021133851786956554 0.014260397379154527 1.6447834244487512e-07 6.783891279330438 -0.05281689061348216 SEWLDPSQKS(ph)PLHVGETR ddPTM_KYSE-520_SHP099_60min_R1 5 SEWLDPSQKSPLHVGETR 18 1 O15164-2;O15164 O15164-2 TRIM24 Transcription intermediary factor 1-alpha 1 SEWLDPS(0.316)QKS(0.684)PLHVGETR;SEWLDPS(0.321)QKS(0.678)PLHVGETR;SEWLDPS(0.3)QKS(0.7)PLHVGETR;SEWLDPS(0.031)QKS(0.969)PLHVGETR;SEWLDPS(0.032)QKS(0.968)PLHVGETR 127.83 2.2646e-05 10597690000.0 5343070.0 5095830.0 4728370.0 4789400.0 4568330.0 4659150.0 4435730.0 4532530.0 5885860.0 4583420.0 True False 5046679.255954015 4851018.677803234 5033168.295859491 5244583.136014377 4927831.580757899 4630070.51662606 4884136.876953001 4516807.711330459 4817136.194456171 4542814.464646806 1.11091467530281 1.0678443320886077 1.1079405366494115 1.1544788317526262 1.0847529915886687 1.0192074874856325 1.075134570201456 0.9942751891985163 1.0603858537354316 1.0 22.115154954093708 -6.115630091953694 4.48694964482841 1.0326026614324368 1.108391244041548 0.614666682656928 0.030246981910253996 0.16467361280357748 5.333658647681163 0.01009029357622045 0.010175790506919935 7.662489775914754e-07 6.115630091953694 0.07578858260911114 SFAPS(ph)TPLTGR ddPTM_KYSE-520_SHP099_60min_R1 1 SFAPSTPLTGR 11 0 P28749;P28749-2;H0YE05 P28749 RBL1 Retinoblastoma-like protein 1 1 S(0.003)FAPS(0.498)T(0.498)PLTGR 78.548 0.016162 446480000.0 930820.0 998560.0 854790.0 812670.0 796830.0 951180.0 856820.0 991300.0 1069800.0 1042800.0 True False 879185.5590563322 950587.6787308835 909891.131112358 889905.9124618545 859535.987657483 945243.3327976945 943435.7273573619 987861.4116711585 875551.2874633792 1033561.603286124 0.8506368234472277 0.919720387936789 0.8803453303793737 0.8610090677057585 0.8316253089556144 0.9145495825235489 0.9128006732813853 0.9557837757617297 0.8471205631862059 1.0 19.979192949482545 -6.4437080896363 8.335336375722065 0.9236351202196452 0.8717127762722853 0.3215427486357959 0.041692779907718164 0.4624011158534374 44.92515930632248 0.014238991933554131 0.012525188364699544 3.599912213970804e-07 6.4437080896363 -0.05192234394735995 SFDTVIGAGT(ph)PPGLAEPLLVVRPK ddPTM_KYSE-520_SHP099_60min_R1 1 SFDTVIGAGTPPGLAEPLLVVRPK 24 1 Q9H6A9-2;Q9H6A9 Q9H6A9-2 PCNXL3 Pecanex-like protein 3 1 SFDTVIGAGT(1)PPGLAEPLLVVRPK 137.03 4.176e-06 162180000.0 224040.0 313630.0 254560.0 339940.0 278620.0 391350.0 271120.0 413110.0 572900.0 276570.0 True False 211612.05458733274 298562.7440317724 270969.344910401 372247.7953933123 300545.80886905355 388907.4394860879 298527.4554762118 411677.0178305985 468875.8016337355 274119.8049682041 0.771969229337071 1.0891688182340693 0.9885069958437751 1.3579748294235445 1.0964031179867308 1.4187498766504605 1.0890400841735561 1.5018142081282673 1.7104776566148572 1.0 18.0644470400949 -3.808429497890192 0.4739438298323538 1.37357264020684 0.13470451780247555 0.4004398227418826 0.20887741026487042 7.004997879185953 0.8848755254411681 0.13232921350557317 5.302704320958633 0.00015544276115721264 3.808429497890192 -1.2388681224043645 SFELPPYT(ph)PPPILS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 8 SFELPPYTPPPILSPVR 17 0 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 2 SFELPPY(0.07)T(0.93)PPPILS(1)PVR;SFELPPY(0.042)T(0.958)PPPILS(1)PVR;SFELPPYT(1)PPPILS(1)PVR;SFELPPYT(1)PPPILS(1)PVR;SFELPPY(0.001)T(0.999)PPPILS(1)PVR;SFELPPY(0.119)T(0.882)PPPILS(1)PVR;SFELPPY(0.061)T(0.939)PPPILS(1)PVR;SFELPPYT(1)PPPILS(1)PVR 221.37 7.587499999999999e-18 1496674000.0 955224.0 902165.0 795162.0 1079036.0 1188328.0 1744022.0 2032323.0 2644776.0 2887665.0 2256928.0 True False 902235.8205281644 858823.6392227281 846419.4148241841 1181587.2570159985 1281842.652938573 1733136.911785886 2237770.042401081 2635601.88935136 2363337.828110806 2236933.3737834147 0.403336027394583 0.38392902054573286 0.3783838288364401 0.5282174564804014 0.5730356871427696 0.7747825358135555 1.0003740248267883 1.1782210057037423 1.0565079209818389 1.0 21.093090856233626 -6.391883435707148 1.1764719420940144 1.103898718552985 0.39997702996867257 0.9638584020079587 0.05610404856072765 0.07836544641883995 0.22263809722668457 0.031116816076255095 0.024910871982673815 4.056173882234929e-07 6.391883435707148 -0.7039216885843124 down SFELPPYTPPPILS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 4 SFELPPYTPPPILSPVR 17 0 A0A0A0MSU2;A0A1C7CYX1;Q6PJG2 A0A0A0MSU2 ELMSAN1 ELM2 and SANT domain-containing protein 1 1 SFELPPYTPPPILS(1)PVR;SFELPPYTPPPILS(1)PVR;SFELPPYT(0.001)PPPILS(0.999)PVR;SFELPPYT(0.003)PPPILS(0.997)PVR 219.97 3.6935000000000004e-18 296055000.0 284930.0 344473.0 271364.0 276942.0 266997.0 354779.0 357326.0 466293.0 525730.0 414236.0 True False 269124.36490612687 327924.00001548533 288856.5576377513 303262.4844143514 288008.1448948776 352564.6926624124 393447.99924569513 464675.5384166048 430270.6845748017 410566.19131073175 0.6554956803602067 0.7987116498038687 0.70355660975293 0.7386445616629721 0.7014901640473907 0.8587280202903467 0.9583058897022504 1.1317920185613166 1.0479934628839345 1.0 18.647255305885903 -6.699772011988569 1.8731233003472776 1.066019192898929 0.7237365103274784 0.9014619865401816 0.049472148775112273 0.09120347536344134 0.6551640345643025 0.023547639210118123 0.015570561110346024 1.9963100264384274e-07 6.699772011988569 -0.34228268257145067 SFEVEEVETPNS(ph)TPPRR ddPTM_KYSE-520_SHP099_60min_R1 2 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 SFEVEEVET(0.047)PNS(0.476)T(0.476)PPRR;S(0.001)FEVEEVET(0.06)PNS(0.469)T(0.469)PPRR 117.65 7.7818e-05 1089500000.0 346430.0 280200.0 263780.0 222445.0 228382.0 305000.0 312330.0 237190.0 392690.0 339600.0 True False 327212.8373089165 266738.77141122543 280783.6808629225 243586.1059194723 246354.3640841727 303096.3818659944 343903.3644470544 236367.24325056214 321387.39490932354 336591.40820480173 0.9721366301477941 0.7924705292801951 0.8341974097332795 0.7236848593926687 0.7319092468761901 0.9004875777505675 1.021723537987053 0.7022378987961053 0.954829467048585 1.0 18.360638825500025 -6.359894540443736 9.93559698640722 0.904157522599516 0.8063584668743651 0.19985688331827423 0.10352796292430876 0.82879957656952 78.7375217938112 0.03655790560054838 0.0322229431393073 4.36621844076934e-07 6.359894540443736 -0.09779905572515091 SFEVEEVETPNST(ph)PPRR ddPTM_KYSE-520_SHP099_60min_R1 1 SFEVEEVETPNSTPPRR 17 1 Q9UHD8;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 SFEVEEVET(0.003)PNS(0.291)T(0.706)PPRR 161.26 1.9697999999999998e-06 0.0 196040.0 212230.0 180270.0 176620.0 184910.0 184660.0 170840.0 176350.0 218100.0 181890.0 True False 185165.27040394885 202034.15223627552 191890.49264219802 193405.91169726066 199461.36500601785 183507.46844385096 188110.1744377254 175738.28301039955 178498.53785358276 180278.5961082786 1.0271062366867734 1.120677421488961 1.0644108440191375 1.0728168283554724 1.1064062473962117 1.0179104586194638 1.0434415315989203 0.974815018555214 0.9901260699100035 1.0 17.459868594881673 -6.754968394540481 1.4211078772074137 0.9882840189053768 1.0788221965449942 0.6215623117616111 0.028565912456499386 0.25406309299879665 1.040244500887219 0.016235854888580602 0.009613167092841325 1.7580515502039156e-07 6.754968394540481 0.09053817763961747 SFFT(ph)PGKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SFFTPGKPK 9 1 Q9NTI5-2;Q9NTI5;A9IYQ1 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 SFFT(1)PGKPK;S(0.01)FFT(0.99)PGKPK 111.5 0.0029714000000000003 1153620000.0 1671870.0 1960310.0 1664080.0 1513200.0 1528300.0 1566980.0 1565620.0 1580010.0 2087200.0 1914660.0 True False 1579128.038309782 1866133.765114701 1771349.2594221383 1657014.0730398288 1648568.5151624978 1557199.8965782807 1723888.148578735 1574529.314087107 1708217.0940302538 1897697.6019829374 0.8321283837107258 0.9833672989652014 0.9334201916950438 0.8731707682553773 0.8687203448219989 0.8205732541112637 0.9084103530390797 0.8297050659925237 0.9001524227281037 1.0 20.855818686616075 -1.425192577017055 17.887183413914997 0.8907391488103285 0.12874188174103196 0.0 0.05968045740824143 0.0 0.0 0.013360559605850442 0.0 0.03756707855433882 1.425192577017055 -0.7619972670692965 SFGAS(ph)FVS(ph)FLNAMMTFEEEKMQLACDDLK ddPTM_KYSE-520_SHP099_60min_R1 2 SFGASFVSFLNAMMTFEEEKMQLACDDLK 29 1 Q8N584-2 Q8N584-2 2 S(0.608)FGAS(0.706)FVS(0.64)FLNAMMT(0.046)FEEEKMQLACDDLK;S(0.617)FGAS(0.716)FVS(0.647)FLNAMMT(0.02)FEEEKMQLACDDLK 43.92100000000001 0.042477999999999995 4194400000.0 891920.0 653050.0 634720.0 454310.0 851540.0 911360.0 652150.0 771630.0 858540.0 887090.0 True False 842443.4196015609 621676.4977519651 675635.0667879079 497487.4858067177 918551.353400166 905671.8641881719 718075.6863706539 768953.3956297956 702650.7780321647 879231.072745576 0.9581592890829731 0.7070683885302814 0.7684385683482515 0.5658210921199736 1.0447212136529758 1.0300726308045838 0.8167087226891538 0.8745748637256231 0.7991650884653065 1.0 19.745882847648208 -5.7736810019055635 24.998029780132907 0.9208541633818964 0.7481406051747413 0.3490203643634445 0.11865048473908264 273.5704821538826 558643.3349089356 0.03778693051175812 0.04315494819923861 1.683910473283475e-06 5.7736810019055635 -0.17271355820715506 SFGEKS(ph)YLNVHR ddPTM_KYSE-520_SHP099_60min_R1 5 SFGEKSYLNVHR 12 1 Q6ZN11-3;Q6ZN11-2;Q6ZN11 Q6ZN11-3 ZNF793 Zinc finger protein 793 1 SFGEKS(0.561)Y(0.439)LNVHR;S(0.002)FGEKS(0.549)Y(0.449)LNVHR;S(0.001)FGEKS(0.543)Y(0.456)LNVHR;SFGEKS(0.566)Y(0.434)LNVHR;SFGEKS(0.557)Y(0.443)LNVHR 71.555 0.013931 47318000000.0 18351000.0 16422400.0 10659000.0 8601520.0 16955900.0 16366900.0 12925900.0 14094400.0 13143300.0 13702800.0 True False 17333033.44818844 15633443.253475046 11346096.195002986 9419005.874658711 18290232.864126004 16264748.10610671 14232576.116627216 14045509.816057704 10756808.035630422 13581403.852617074 1.276232828084885 1.1510918475826455 0.8354140940162563 0.6935222585877021 1.346711508074444 1.1975748812574016 1.0479458729801827 1.034172164267923 0.7920247532848111 1.0 23.695129276822914 -7.60470333560458 7.0790345673037365 0.8974401716895497 1.0697879441604359 0.12414615448430422 0.18997854015574656 0.5363690415036371 38.48267346671645 0.1402915548910369 0.05203822478978031 2.484829900610406e-08 7.60470333560458 0.17234777247088617 SFGS(ph)PNR ddPTM_KYSE-520_SHP099_60min_R1 5 SFGSPNR 7 0 D6REC6;D6R9G1;D6RAD4;P50613 D6REC6 CDK7 Cyclin-dependent kinase 7 1 S(0.031)FGS(0.969)PNR;SFGS(1)PNR;S(0.018)FGS(0.982)PNR;S(0.085)FGS(0.915)PNR;S(0.028)FGS(0.972)PNR 115.82 0.0027351999999999997 13258000000.0 18680300.0 16276070.0 15336120.0 14783060.0 16405780.0 15599280.0 14792200.0 16162880.0 18624000.0 15318840.0 True False 17644066.520745162 15494143.166320842 16324710.833859574 16188037.577710927 17696821.54988065 15501919.107260888 16287539.933959952 16106814.74172455 15242351.072834143 15183126.995477187 1.1620838399099902 1.0204843291461834 1.0751876631686244 1.0661860091490434 1.1655584225273392 1.0209964727212428 1.0727394915956214 1.060836463168787 1.003900650858983 1.0 23.855965611505113 -7.569868786199586 0.9751466173131604 0.9960391707975182 1.0858458482825388 0.32872286457681565 0.0460535032681405 0.6511830572583315 1.1874781261733944 0.04173767348291705 0.015274546015897582 2.6923481227276992e-08 7.569868786199586 0.08980667748502058 SFGTRPLS(ph)S(ph)GFSPEEAQQQDEEFEK ddPTM_KYSE-520_SHP099_60min_R1 2 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 SFGT(0.024)RPLS(0.897)S(0.645)GFS(0.434)PEEAQQQDEEFEK;S(0.017)FGT(0.021)RPLS(0.796)S(0.684)GFS(0.482)PEEAQQQDEEFEK 138.15 1.1876999999999999e-06 950770000.0 1089220.0 1023390.0 936490.0 1118450.0 1002700.0 1008750.0 1011830.0 1066700.0 1302020.0 1147540.0 True False 1028798.7952937606 974224.8082602929 996857.6438369798 1224747.1517257462 1081606.7854174147 1002454.0170731856 1114115.6509091738 1062999.866669651 1065605.9892531969 1137373.6883726118 0.904538944246017 0.8565564846626994 0.8764556926433857 1.07682036629329 0.9509687066570092 0.8813761275834742 0.9795511029477776 0.9346091592734336 0.9369005104891232 1.0 20.11727490428224 -5.102425302912419 24.097402605334814 0.9607874774372837 0.8768650057637849 0.39124168486115063 0.049183893242079155 28.029704127222136 6584.157204947625 0.013569449351513808 0.023503003529587004 7.89904698481536e-06 5.102425302912419 -0.08392247167349876 SFGTRPLS(ph)SGFSPEEAQQQDEEFEK ddPTM_KYSE-520_SHP099_60min_R1 8 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 SFGT(0.002)RPLS(0.468)S(0.097)GFS(0.433)PEEAQQQDEEFEK;SFGTRPLS(0.789)S(0.203)GFS(0.008)PEEAQQQDEEFEK;S(0.002)FGT(0.002)RPLS(0.489)S(0.489)GFS(0.018)PEEAQQQDEEFEK;SFGTRPLS(0.803)S(0.191)GFS(0.006)PEEAQQQDEEFEK;SFGTRPLS(0.454)S(0.454)GFS(0.093)PEEAQQQDEEFEK;SFGTRPLS(0.631)S(0.176)GFS(0.192)PEEAQQQDEEFEK;SFGTRPLS(0.935)S(0.063)GFS(0.001)PEEAQQQDEEFEK;SFGT(0.003)RPLS(0.85)S(0.138)GFS(0.009)PEEAQQQDEEFEK 390.79 2.4630999999999994e-100 51031770000.0 3792398.0 4043065.0 3373994.0 3149417.0 3289782.0 3644718.0 3456802.0 3885752.0 4696619.0 3865997.0 True False 3582026.122982019 3848830.0886357063 3591487.051821273 3448736.6447732477 3548669.1271009054 3621969.9630225007 3806249.2812964055 3872273.23325333 3843831.3817301975 3831747.274280154 0.9348283867847081 1.0044582309669057 0.9372974767747392 0.9000428258727319 0.9261229598623701 0.9452528321307248 0.9933455963667284 1.01057636531647 1.0031536807062291 1.0 21.86957097951977 -6.798443517622169 3.790148978128798 1.0045469672179925 0.9409871622273658 0.594739817979431 0.024584913765025234 0.17795077976041898 5.369309574634501 0.011863162870357649 0.008070817903265802 1.590583534478126e-07 6.798443517622169 -0.06355980499062674 SFGTRPLS(ph)SGFSPEEAQQQDEEFEKK ddPTM_KYSE-520_SHP099_60min_R1 7 SFGTRPLSSGFSPEEAQQQDEEFEKK 26 2 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 SFGT(0.001)RPLS(0.952)S(0.041)GFS(0.006)PEEAQQQDEEFEKK;SFGTRPLS(0.833)S(0.167)GFSPEEAQQQDEEFEKK;SFGTRPLS(0.811)S(0.188)GFSPEEAQQQDEEFEKK;SFGTRPLS(0.787)S(0.109)GFS(0.103)PEEAQQQDEEFEKK;SFGTRPLS(0.827)S(0.173)GFSPEEAQQQDEEFEKK;S(0.001)FGT(0.005)RPLS(0.93)S(0.042)GFS(0.021)PEEAQQQDEEFEKK;SFGT(0.001)RPLS(0.923)S(0.075)GFSPEEAQQQDEEFEKK 264.86 2.9312999999999995e-38 6012990000.0 1135337.0 1084088.0 1134060.0 1132310.0 1122256.0 1078180.0 1043088.0 1217539.0 1439441.0 1045780.0 True False 1072357.5933718025 1032006.7852307365 1207163.3221601543 1239924.4019585848 1210571.1624368264 1071450.678689435 1148533.5145978583 1213315.6413847383 1178074.7997546971 1036515.2028045283 1.0345797056042154 0.9956504086369469 1.1646363882496837 1.1962433340135161 1.1679241743501205 1.0337047404518338 1.1080720393586498 1.1705719685556335 1.136572620032149 1.0 19.9833098462634 -4.756442760006486 24.99950404435906 1.1289175755697467 1.0151150211135844 0.3332452545400484 0.06000109499539632 129.55629515086224 648185.925673371 0.015557598538706204 0.03857240839213823 1.7520933448166102e-05 4.756442760006486 -0.11380255445616227 SFGTRPLSS(ph)GFS(ph)PEEAQQQDEEFEK ddPTM_KYSE-520_SHP099_60min_R1 5 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 S(0.012)FGT(0.013)RPLS(0.566)S(0.685)GFS(0.724)PEEAQQQDEEFEK;S(0.03)FGT(0.035)RPLS(0.614)S(0.645)GFS(0.676)PEEAQQQDEEFEK;S(0.003)FGT(0.004)RPLS(0.472)S(0.619)GFS(0.903)PEEAQQQDEEFEK;S(0.003)FGT(0.003)RPLS(0.434)S(0.582)GFS(0.978)PEEAQQQDEEFEK;SFGTRPLS(0.41)S(0.658)GFS(0.932)PEEAQQQDEEFEK 141.17 1.0125e-06 1141040000.0 1054594.0 1166892.0 999158.0 1109188.0 1078116.0 1076211.0 1069400.0 1147442.0 1364152.0 1165742.0 True False 996093.5685389809 1110832.7567793983 1063565.3233893248 1214604.8940304688 1162957.5955590731 1069493.9679487983 1177505.3883382292 1143461.791516977 1116456.3842734576 1155414.432813551 0.8621093351875416 0.9614149912204301 0.9205054854641513 1.051228770851324 1.0065285342915042 0.9256366699042111 1.0191195080287203 0.9896551047337463 0.9662821863448368 1.0 20.139978990595278 -3.855343829109808 1.0620235287011905 0.9896669691078247 0.6876839378403067 0.514368472698691 0.036727644827736446 3.122293857461523 1.6085463312897197 0.011518884989734182 1.3042145128069973 0.00013952632996072444 3.855343829109808 -0.301983031267518 SFGTRPLSS(ph)GFSPEEAQQQDEEFEK ddPTM_KYSE-520_SHP099_60min_R1 2 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.006)FGT(0.002)RPLS(0.114)S(0.559)GFS(0.32)PEEAQQQDEEFEK;SFGTRPLS(0.384)S(0.6)GFS(0.017)PEEAQQQDEEFEK 221.59 1.4185e-21 3904400000.0 3290920.0 3486980.0 2976830.0 2882780.0 2776430.0 3476270.0 2956560.0 3404490.0 4230080.0 3624150.0 True False 3108366.1073136246 3319460.2467363114 3168721.2248964016 3156758.544460588 2994919.245274233 3454573.309473117 3255437.9380449625 3392680.6188039407 3462004.103639085 3592042.8505460317 0.8653477245799329 0.9241148797074387 0.882150173797264 0.8788198459215832 0.8337648992185522 0.9617294261809772 0.906291509732435 0.9444989272018885 0.9637981081191224 1.0 21.776373129843524 -7.411004242761862 0.718796471250322 0.9976203305393097 0.8825527794388152 0.6259543856185477 0.03012399583992317 0.44635196463312643 0.4605299656129242 0.02862822367658154 0.013086524664130461 3.881465740439529e-08 7.411004242761862 -0.11506755110049449 SFGTRPLSSGFS(ph)PEEAQQQDEEFEK ddPTM_KYSE-520_SHP099_60min_R1 4 SFGTRPLSSGFSPEEAQQQDEEFEK 25 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 SFGTRPLS(0.212)S(0.212)GFS(0.576)PEEAQQQDEEFEK;SFGTRPLS(0.135)S(0.273)GFS(0.591)PEEAQQQDEEFEK;SFGTRPLS(0.143)S(0.143)GFS(0.713)PEEAQQQDEEFEK;SFGTRPLS(0.28)S(0.051)GFS(0.669)PEEAQQQDEEFEK 413.16 2.719799999999999e-115 11260400000.0 2591260.0 2640980.0 2282330.0 2141840.0 2372900.0 2370840.0 2413430.0 2606060.0 3081770.0 2531590.0 True False 2447517.6422512583 2514103.3566082027 2429452.6436571144 2345399.8296323232 2559633.7300458644 2356042.7081415546 2657403.0572069734 2597020.186118978 2522198.2530996627 2509162.0821472146 0.9754322606998731 1.001969292655961 0.9682326466443775 0.9347342869238834 1.0201149412617692 0.9389758935482445 1.0590798721670869 1.0350149177675199 1.005195428005708 1.0 21.25877423559036 -6.764318995346622 24.999997770924608 1.0277404612416845 0.9747013249807214 0.44097728058325025 0.02834586938645343 69.76287714205849 605649.4450346944 0.01120033570297076 0.007926305464132383 1.7206043029018488e-07 6.764318995346622 -0.05303913626096313 SFKLS(ph)GFSFK ddPTM_KYSE-520_SHP099_60min_R1 3 SFKLSGFSFK 10 1 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 SFKLS(1)GFSFK;SFKLS(0.977)GFS(0.023)FK;SFKLS(0.66)GFS(0.34)FK 139.6 0.00016311 16616900000.0 8405490.0 7899830.0 8134960.0 8419020.0 7564261.0 7596680.0 7057120.0 7643420.0 10425830.0 6862067.0 True False 7939220.713771099 7520310.308913422 8659352.5379962 9219161.129529344 8159525.305942276 7549266.302274635 7770522.560453979 7616906.760007643 8532762.085786423 6801274.4249873385 1.1673136853003663 1.1057207574633958 1.2731955802551405 1.355504947081518 1.1997053487453515 1.1099781938719064 1.1425097819764043 1.1199234561134215 1.2545828256007046 1.0 22.697373673678197 -6.112425043403174 5.541416043017616 1.134668485681817 1.2266915910805092 0.24192592492750875 0.08392970179266858 0.39184685110708817 16.601808478432 0.02916660200225266 0.029313336637694674 7.719247336214362e-07 6.112425043403174 0.09202310539869218 SFLDDPIWR ddPTM_KYSE-520_SHP099_60min_R1 2 SFLDDPIWR 9 0 Q7L576;Q7L576-2;H0YL50;Q7L576-3 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 0 ; 101.64 0.017493 0.0 188632.0 199558.0 165537.0 109875.0 188412.0 187606.0 133066.0 131454.0 157177.0 151198.0 False True 178168.2069314308 189970.93413733516 176207.77988856478 120317.4869648767 203238.95248236376 186435.08136508768 146517.60987901164 130998.01675559425 128637.6189097323 149858.503350264 1.1889095576712023 1.2676687000758071 1.1758277037954572 0.8028739395832538 1.356205673610217 1.2440740912067785 0.9777063470102613 0.8741447020154259 0.8583938584323628 1.0 17.19324142277411 -6.91004514364369 4.887767112835254 0.9040737106224194 1.167767180297301 0.42582002867867985 0.1406081492116835 0.21203902071028 8.658228554144884 0.0635065955176389 0.041994574010367824 1.230140894611099e-07 6.91004514364369 0.2636934696748817 SFLDS(ph)GYRILGAVAK ddPTM_KYSE-520_SHP099_60min_R1 2 SFLDSGYRILGAVAK 15 1 P18206-2;P18206 P18206-2 VCL Vinculin 1 SFLDS(0.718)GY(0.282)RILGAVAK;SFLDS(0.59)GY(0.41)RILGAVAK 137.09 7.279e-05 52428000.0 211720.0 224990.0 226380.0 194627.0 214670.0 212580.0 157892.0 177905.0 265990.0 169434.0 True False 199975.46954664344 214181.14268312516 240972.81702080686 213124.29156325888 231563.3076947806 211253.20936745268 173853.26423742296 177287.88907833895 217692.92106223997 167932.94657765722 1.1908054590953585 1.2753968000203069 1.4349347280068943 1.2691035077188015 1.3789033802708799 1.2579616666808313 1.0352540569341349 1.0557064155148121 1.29630858922357 1.0 17.35752577321255 -6.619413326136146 5.301763424712051 1.1027636486956465 1.3131302390342947 0.5240601196877894 0.09622926069621653 0.17121101770636385 7.618541746927373 0.037213905010204544 0.028542237650499458 2.402075611762331e-07 6.619413326136146 0.21036659033864824 SFLDSGY(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 SFLDSGYR 8 0 P18206-2;P18206 P18206-2 VCL Vinculin 1 SFLDSGY(1)R;SFLDSGY(1)R 131.03 0.0014589 2589000000.0 5425100.0 4920500.0 4948300.0 4849300.0 5268800.0 5081500.0 5213100.0 5518900.0 6378900.0 5069100.0 True False 5124158.888331274 4684111.794178924 5267275.335559928 5310176.014004795 5683424.584628783 5049784.473613276 5740091.022953086 5499756.224020949 5220652.558983125 5024191.717700122 1.0198971648074195 0.932311515437776 1.0483826317780485 1.0569214537130731 1.1312117259789665 1.0050939051197014 1.1424904433345697 1.0946549282037592 1.0391029746318947 1.0 22.26046008628022 -4.9213147659818235 5.569533232365085 1.0727718034800664 0.9767955607514803 0.3450408495934467 0.04889167788934842 0.19107421031833566 10.034890291658554 0.012260063031681173 0.026219063548447424 1.1986302504652048e-05 4.9213147659818235 -0.09597624272858607 SFLEDIR ddPTM_KYSE-520_SHP099_60min_R1 2 SFLEDIR 7 0 P52209-2;P52209;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 117.93 0.03145 239320000.0 1105720.0 1100650.0 813460.0 721310.0 1166930.0 1162870.0 941580.0 1017570.0 934240.0 990380.0 False True 1044383.507401827 1047773.1218906672 865896.9331820182 789863.0855302399 1258760.752076537 1155612.0969852754 1036764.0953352456 1014040.287172624 764605.5662738709 981606.0037039795 1.0639538709634657 1.067407002338019 0.882122694762108 0.804664073518072 1.2823482612440689 1.177266736984802 1.0561916812072596 1.0330420589791194 0.7789332618063847 1.0 19.90478454728387 -7.644468644154218 8.765388623596262 0.8903829760582136 1.0465408561888259 0.17633376135726375 0.13547276571732073 0.4650639063520216 33.096106962304546 0.0988681395895773 0.03706685838422996 2.267416777600167e-08 7.644468644154218 0.15615788013061227 SFLEDIRK ddPTM_KYSE-520_SHP099_60min_R1 2 SFLEDIRK 8 1 P52209-2;P52209;K7ELN9 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ; 117.4 0.0024153000000000004 4084500000.0 7733400.0 7286300.0 4717600.0 3845800.0 6741900.0 6514800.0 4468500.0 4981900.0 5477800.0 5156800.0 False True 7304412.885849301 6936255.21104073 5021704.044426884 4211303.675718067 7272449.173836308 6474138.71665765 4920219.588357379 4964618.951684206 4483169.604100668 5111114.763929686 1.4291232389063586 1.3570924409663976 0.982506610860356 0.82395013029999 1.422869473634139 1.266678408856545 0.9626509706024412 0.9713377963493729 0.8771412521862019 1.0 22.285206555006532 -4.699373892510853 5.828767993143412 1.0490628035319707 1.404962466920107 0.4101526393872441 0.17012300660274132 0.21164725070647294 13.769471723484207 0.047378475182160304 0.12757061224938127 1.9981408908263506e-05 4.699373892510853 0.3558996633881364 SFLSEPSS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 10 SFLSEPSSPGR 11 0 Q69YN4-3;Q69YN4;H0YC41 Q69YN4-3 KIAA1429 Protein virilizer homolog 1 SFLS(0.002)EPS(0.194)S(0.804)PGR;SFLSEPS(0.059)S(0.941)PGR;SFLSEPS(0.084)S(0.916)PGR;SFLSEPS(0.016)S(0.984)PGR;SFLSEPSS(1)PGR;SFLSEPSS(1)PGR;SFLSEPSS(1)PGR;SFLSEPS(0.002)S(0.998)PGR;SFLSEPS(0.023)S(0.977)PGR;SFLSEPSS(1)PGR 228.61 2.3349999999999997e-10 22901910000.0 21042940.0 20710090.0 18023620.0 15588690.0 17364080.0 19426100.0 17526930.0 18409300.0 22364000.0 18476500.0 True False 19875646.17013908 19715146.18992117 19185451.384011608 17070234.410689432 18730534.30789949 19304854.504154097 19298723.130752746 18345442.435062915 18303261.350561816 18312812.58449947 1.0853409916378678 1.0765766372014682 1.0476518172992588 0.9321470599845599 1.022810353214317 1.054172012905015 1.053837199594768 1.0017818044286142 0.9994784398140054 1.0 24.126350049562582 -5.005280809651384 18.731266410651187 1.0117338929775495 1.076248501735931 0.44391188107790236 0.03240391937329761 9.107244870034254 32322.136895459415 0.009283792205870571 0.01823680283945178 9.879141145733935e-06 5.005280809651384 0.06451460875838144 SFLVASVLPGPDGNINS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 4 SFLVASVLPGPDGNINSPTR 20 0 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-3;Q7Z3K3-6;Q7Z3K3 Q7Z3K3-5 POGZ Pogo transposable element with ZNF domain 1 SFLVASVLPGPDGNINS(0.982)PT(0.018)R;SFLVASVLPGPDGNINS(0.994)PT(0.006)R;SFLVASVLPGPDGNINS(0.778)PT(0.222)R;SFLVASVLPGPDGNINS(0.995)PT(0.005)R 284.98 9.605599999999998e-44 1208019000.0 668729.0 877817.0 621728.0 541842.0 637190.0 770641.0 567980.0 785596.0 914601.0 766133.0 True False 631633.2692917881 835645.3536898204 661805.5816799722 593338.5007692623 687333.2278848331 765831.1436642358 625396.9613506162 782870.9508354847 748532.5136149689 759345.6576624542 0.8318125782613786 1.100480848553536 0.8715471998842448 0.7813813047878313 0.9051651523243026 1.0085408877187056 0.8235998389400402 1.0309810070494774 0.9857599185056616 1.0 19.534397231062847 -7.2874030905156975 24.494238629342316 1.0062778645381376 0.9090268665288644 0.21686474082668672 0.08865730164089837 1039.6557215692071 980807.1248751023 0.04908367972781299 0.02359233423215448 5.1593727967710315e-08 7.2874030905156975 -0.09725099800927317 SFLVIVDGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SFLVIVDGSPK 11 0 Q9H116-4;Q9H116 Q9H116-4 GZF1 GDNF-inducible zinc finger protein 1 1 SFLVIVDGS(1)PK;SFLVIVDGS(1)PK 201.48 2.9271000000000003e-07 1787750000.0 3152300.0 3004420.0 2770900.0 2434120.0 2638750.0 2613940.0 2528970.0 3006900.0 3376200.0 2575350.0 True False 2977435.635045745 2860083.153473643 2949516.647596752 2665458.032955138 2846404.6125662755 2597625.430868187 2784622.967968708 2996469.765715739 2763167.1870759595 2552534.4025919796 1.1664624899951586 1.1204876026624213 1.1555247383156346 1.0442398074041588 1.1151287950030702 1.0176651990392058 1.090924755075212 1.173919443621588 1.0825190776156013 1.0 21.28349897493827 -13.999996112252521 0.013498048604499529 8.417839572571456e-06 1.9665939038270945 0.3284286469813068 0.047629049703878205 10161.743537912243 10.385163861488834 926.4805222446555 615.9448119259761 1.0000089519094577e-14 13.999996112252521 1.966585485987522 SFMDQPLAEHFS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 2 SFMDQPLAEHFSPFR 15 0 A0A0A0MTL5;Q13309-2;Q13309 A0A0A0MTL5 SKP2 S-phase kinase-associated protein 2 1 SFMDQPLAEHFS(1)PFR;SFMDQPLAEHFS(1)PFR 139.44 8.101699999999999e-06 269780000.0 299850.0 286217.0 279077.0 239413.0 280576.0 278895.0 254357.0 288946.0 321444.0 258747.0 True False 283216.72276384395 272466.7056995246 297066.7499589878 262166.739537857 302655.734940936 277154.31285415275 280069.8878450975 287943.7137665032 263077.8725438199 256454.70288211966 1.1043537887235608 1.0624359882562378 1.1583595333618648 1.0222730821136976 1.1801527971200934 1.0807144877415165 1.0920832595291992 1.1227858585960795 1.0258258849896957 1.0 17.968344502225044 -7.878732776001817 4.680664866245165 1.001527583204164 1.1020511122695347 0.4187026362191919 0.04277545687017775 0.18024778639238234 6.034005737220403 0.037692692589486355 0.009893072804970501 1.3221088854846113e-08 7.878732776001817 0.10052352906537076 SFPIKPVPS(ph)PSWSGSCR ddPTM_KYSE-520_SHP099_60min_R1 5 SFPIKPVPSPSWSGSCR 17 1 Q9P0U3-2;Q9P0U3 Q9P0U3-2 SENP1 Sentrin-specific protease 1 1 SFPIKPVPS(0.499)PS(0.248)WS(0.248)GS(0.006)CR;SFPIKPVPS(0.863)PS(0.095)WS(0.032)GS(0.011)CR;SFPIKPVPS(0.996)PS(0.004)WSGSCR;SFPIKPVPS(0.776)PS(0.224)WSGSCR;SFPIKPVPS(0.982)PS(0.017)WS(0.001)GSCR 179.19 5.4848999999999995e-09 7142470000.0 5768500.0 6066090.0 6018610.0 5343500.0 5662520.0 6518510.0 6299520.0 7150150.0 8167230.0 6935560.0 True False 5448509.805780348 5774665.931013281 6406579.230716482 5851344.63341814 6108128.108668417 6477825.561171483 6936336.95899051 7125347.798507562 6684266.911113798 6874116.334184027 0.7926123942194089 0.8400593836762216 0.931985861056417 0.8512140832299003 0.888569208276785 0.9423502958421223 1.0090514361092593 1.036547456008883 0.9723819886308681 1.0 22.71274283670651 -6.3911804745042735 1.6732509790085741 1.0093809753476803 0.8574401667441651 0.7863615039312827 0.03556873669030061 0.1768112644143579 0.9853594472682622 0.016853945410980474 0.013928032337347558 4.062744635167304e-07 6.3911804745042735 -0.15194080860351522 SFPLWYEEALKDEEER ddPTM_KYSE-520_SHP099_60min_R1 4 SFPLWYEEALKDEEER 16 1 P43363 P43363 MAGEA10 Melanoma-associated antigen 10 0 ;;; 169.64 4.3525e-08 1387189000.0 1114860.0 965200.0 713150.0 724710.0 1159400.0 952740.0 901090.0 802160.0 815530.0 793070.0 False True 1053016.49338169 918830.3432052634 759120.7900803436 793586.2205079937 1250638.1839163764 946793.5962590424 992180.9709909267 799377.4941855514 667450.309838296 786044.0167991235 1.339640619198037 1.1689298863273123 0.9657484490138162 1.0095951416812294 1.5910536270082465 1.2045045519391049 1.262246069922675 1.0169627617556631 0.8491258702740886 1.0 19.584250577047623 -7.419306378050606 4.040621379941358 0.9253482394704636 1.2134178612732476 0.352995610978061 0.16678840871858006 0.2822341912578179 7.955936520831824 0.10965468519255493 0.047439752060413246 3.8079709091551156e-08 7.419306378050606 0.28806962180278395 SFPS(ph)SPSK ddPTM_KYSE-520_SHP099_60min_R1 1 SFPSSPSK 8 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7-2;Q96KQ7;Q96KQ7-3 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 SFPS(0.774)S(0.226)PSK 95.50200000000001 0.0034869 320000000.0 1133500.0 1069300.0 903950.0 839940.0 908180.0 1085400.0 905770.0 1097500.0 1166700.0 1019500.0 True False 1070622.4954237703 1017929.2229479785 962220.0633711389 919767.6450628301 979648.5991626485 1078625.6159913128 997334.0710633255 1093693.0286584264 954856.6901135948 1010468.0231589975 1.059531297266304 1.0073839049014686 0.9522518687558045 0.9102392396222362 0.969499852256582 1.0674515088752994 0.9870021101166451 1.0823628294928571 0.9449647769441069 1.0 19.946592236850947 -6.199393921214226 24.998051202026083 1.019669589037134 0.9759218262047675 0.10950311516731781 0.051131734612057965 469.10057905774266 188999.8038129453 0.017187098996954697 0.017187098378182535 6.318384904237596e-07 6.199393921214226 -0.043747762832366366 SFPSS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 3 SFPSSPSK 8 0 A0A0G2JIS2;A2ABF8;A0A0G2JIR1;A2ABF9;A0A0G2JK64;Q96KQ7-2;Q96KQ7;Q96KQ7-3 A0A0G2JIS2 EHMT2 Histone-lysine N-methyltransferase EHMT2 1 SFPS(0.057)S(0.921)PS(0.022)K;SFPS(0.232)S(0.768)PSK;SFPS(0.038)S(0.962)PSK 148.32 0.00045539999999999996 1397750000.0 3833700.0 3682670.0 3230110.0 3125020.0 3194750.0 3965190.0 3340230.0 3784810.0 4021870.0 3847940.0 True False 3621037.018708522 3505749.0053996383 3438328.058958732 3422020.961228475 3446158.6493590153 3940441.778397447 3677893.0459033153 3771681.377491291 3291599.7910921127 3813850.245252022 0.9494439440081479 0.9192151710109886 0.9015372491982901 0.8972614919761606 0.9035904473829938 1.0331925809889946 0.9643517205433108 0.9889432292698885 0.8630647716674049 1.0 21.862816765184093 -6.1801649909866745 24.99988655123275 0.968875864112677 0.9128420264567032 0.2943313122686019 0.04308247765270797 129.80078168157308 39925.226921376 0.01406485019167224 0.014064849834611856 6.604424944160437e-07 6.1801649909866745 -0.056033837655973806 SFPVFS(ph)PPGPPR ddPTM_KYSE-520_SHP099_60min_R1 4 SFPVFSPPGPPR 12 0 A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4;H3BSV5;H3BS40;H3BUP6;H3BQI5;H3BU12 A0A0A0MTL6 FAM65A Protein FAM65A 1 SFPVFS(1)PPGPPR;SFPVFS(1)PPGPPR;SFPVFS(1)PPGPPR;SFPVFS(1)PPGPPR 124.48 0.00028445 90092000.0 616977.0 698680.0 563391.0 477510.0 551190.0 551050.0 496984.0 601390.0 789840.0 592775.0 True False 582752.0558968427 665114.3640599387 599708.0853174713 522892.40683138306 594565.5171578992 547610.6925483813 547223.9928164275 599303.9184554816 646424.9662460985 587523.4746719718 0.9918787606268957 1.1320643220788544 1.020738934137572 0.889994067255485 1.0119859763728747 0.9320660640055707 0.9314078779949271 1.0200510180296833 1.1002538521665246 1.0 19.164286970567645 -4.998601872752743 24.99909498347742 0.979366171982864 1.0655790804474325 0.1950685867606331 0.0633526559757971 67.041346278093 1198617.1257313332 0.016708449632815942 0.03436773202237459 1.0032244944915479e-05 4.998601872752743 0.08621290846456853 SFQEILQIVS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 SFQEILQIVSPVR 13 0 A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;Q7Z3U7-3 A0A286YFF8 MON2 Protein MON2 homolog 1 SFQEILQIVS(1)PVR 75.574 0.015955 102250000.0 109350.0 129660.0 106480.0 233660.0 117420.0 99135.0 88492.0 101010.0 138600.0 116670.0 True False 103284.1375161793 123430.93897637221 113343.87117402379 255866.97614755918 126660.28597158955 98516.26169273895 97437.63495869341 100659.61988591128 113433.73382167163 115636.39456788641 0.8931801955788625 1.0674056333009403 0.9801747243812868 2.2126855226132798 1.0953323687139982 0.8519485760592719 0.8426208316404306 0.870483901388133 0.9809518382647111 1.0 16.81923600721499 -5.9986118730590645 24.999998304906196 0.905466660675684 1.3009959337874235 0.21316500725394094 0.3431696957671452 75.70230514571527 1363338.2272494116 0.11240299894466285 0.12650031298304248 1.0032013939522464e-06 5.9986118730590645 0.39552927311173947 SFQSLACS(ph)PGLPAADR ddPTM_KYSE-520_SHP099_60min_R1 10 SFQSLACSPGLPAADR 16 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9K0F0;A0A087WXJ0;C9J0X3 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 SFQS(0.001)LACS(0.999)PGLPAADR;SFQSLACS(1)PGLPAADR;SFQSLACS(1)PGLPAADR;SFQSLACS(1)PGLPAADR;SFQSLACS(1)PGLPAADR;SFQSLACS(1)PGLPAADR;SFQSLACS(1)PGLPAADR;SFQSLACS(1)PGLPAADR;SFQSLACS(1)PGLPAADR;SFQSLACS(1)PGLPAADR 316.75 3.403e-47 21352460000.0 9302910.0 10669220.0 8420690.0 6716100.0 7784100.0 10067520.0 7793260.0 9593160.0 11331590.0 10395010.0 True False 8786859.037408689 10156654.656374283 8963501.150980378 7354396.124730903 8396664.38452948 10004684.873323077 8581078.775688043 9559883.567020372 9274058.902137924 10302918.298595406 0.8528514720539518 0.9858036686323075 0.8699963341650849 0.7138167955513658 0.8149792263881386 0.971053499927978 0.8328784648188367 0.9278811391063508 0.9001390318122054 1.0 23.296549702453433 -8.144526791021955 0.7196887520341493 0.9992661417578897 0.8609581845485018 0.23820548506997308 0.07354612341019985 1.436965590775902 1.6363140059066197 0.07923697543256959 0.03012266828930882 7.1692414816368696e-09 8.144526791021955 -0.13830795720938793 SFRS(ph)VT(ph)SRLYVRR ddPTM_KYSE-520_SHP099_60min_R1 1 SFRSVTSRLYVRR 13 3 Q96RT6 Q96RT6 CTAGE1 cTAGE family member 2 2 S(0.026)FRS(0.506)VT(0.506)S(0.506)RLY(0.456)VRR 40.725 0.06372 917670000.0 692270.0 1213700.0 899300.0 2890500.0 994630.0 870630.0 1190200.0 1044600.0 1193700.0 425760.0 True False 653868.4030939688 1155392.03019916 957270.3169308753 3165212.2509394865 1072901.7223294347 865196.0752261993 1310517.0312326185 1040976.5264114715 976954.1707282076 421988.09763626795 1.549494895132255 2.7379730297394516 2.2684770549049778 7.500714519364801 2.5424928530904225 2.0502854940045108 3.105578187094312 2.4668385962599824 2.3151225738368852 1.0 18.686842782081847 -5.972346652216111 24.999919995524824 2.3321440827148487 3.5762259417577025 0.13602599223991207 1.5618197465935033 487.56864084961535 440782.72823147493 0.5013402256473545 0.5684551655726979 1.0657451079153937e-06 5.972346652216111 1.2440818590428537 SFS(ph)ADNFIGIQR ddPTM_KYSE-520_SHP099_60min_R1 3 SFSADNFIGIQR 12 0 Q8N7R7-3;Q8N7R7-2;Q8N7R7 Q8N7R7-3 CCNYL1 Cyclin-Y-like protein 1 1 S(0.001)FS(0.999)ADNFIGIQR;SFS(1)ADNFIGIQR;SFS(1)ADNFIGIQR 199.03 4.1879999999999995e-08 981290000.0 706170.0 806600.0 618300.0 871230.0 888800.0 785850.0 761210.0 1011040.0 1289060.0 795090.0 True False 666997.3423850056 767849.725268717 658156.6073149791 954031.4372551481 958743.5034197646 780945.2186537432 838160.535493683 1007532.9382185108 1054999.1985581827 788046.1211706594 0.846393788975405 0.974371555979566 0.8351752386488157 1.2106289360804339 1.2166083655047124 0.9909892297847139 1.0635932504160766 1.2785202682322692 1.338753113829123 1.0 19.587920541728906 -5.262576664895555 24.999898109845045 1.160291279573101 0.8942193227662761 0.5483317416384451 0.11288803480492102 82.34837259640706 1810207.5874968725 0.03301289601646415 0.05225126027906038 5.462901061725917e-06 5.262576664895555 -0.26607195680682494 SFS(ph)ASQSTDR ddPTM_KYSE-520_SHP099_60min_R1 3 SFSASQSTDR 10 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.197)FS(0.797)AS(0.006)QSTDR;SFS(0.983)AS(0.017)QSTDR;SFS(0.996)AS(0.003)QSTDR 195.29 2.3100999999999997e-06 1506880000.0 2296710.0 2174910.0 2126710.0 2065160.0 2158550.0 2155360.0 2278970.0 2392020.0 2696080.0 2367550.0 True False 2169306.9179221257 2070424.058993534 2263801.129456313 2261432.185487003 2328415.604530529 2141907.598749802 2509350.5282038297 2383722.6409216663 2206539.834645979 2346575.3489260282 0.9244565357404636 0.8823173140130011 0.9647255224480223 0.9637159899945283 0.9922611714114313 0.912780235132915 1.0693671223267132 1.015830427952224 0.9403234529229415 1.0 21.162125355612627 -5.062893549258973 0.8001245742135337 0.9955482531253663 0.8899874695071306 0.3502244951066329 0.04206911895883768 1.1484400403265003 1.1445254186068299 0.018795295262409053 0.08907542741469815 8.65179958682247e-06 5.062893549258973 -0.10556078361823573 SFS(ph)EDTLMDGPAR ddPTM_KYSE-520_SHP099_60min_R1 5 SFSEDTLMDGPAR 13 0 Q9BRG2;M0QZQ6 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 S(0.001)FS(0.999)EDTLMDGPAR;S(0.002)FS(0.996)EDT(0.002)LMDGPAR;SFS(0.917)EDT(0.083)LMDGPAR;SFS(0.944)EDT(0.056)LMDGPAR;SFS(0.679)EDT(0.321)LMDGPAR 322.26 3.7197999999999994e-40 2691600000.0 3940530.0 3828100.0 3190760.0 3157200.0 3420410.0 3736420.0 3146970.0 3506410.0 3934760.0 3384190.0 True False 3721940.9456481966 3644192.329904758 3396441.4949965077 3457259.33875321 3689576.807529253 3713099.6168253715 3465096.4390674783 3494247.0821122453 3220306.771227709 3354208.7094599777 1.10963308131396 1.0864536603303576 1.0125909832078783 1.0307227838871789 1.0999842666687456 1.1069971902324394 1.0330592814021264 1.0417500474127663 0.9600794256318574 1.0 21.67754103006152 -7.466755374858835 2.002282931854434 0.9820584934861246 1.0696397309210237 0.5095796297711195 0.03380992985260416 0.30993772801542124 2.255219036578152 0.0301263416166716 0.010253056616935796 3.4138514955853106e-08 7.466755374858835 0.0875812374348991 SFS(ph)KEELMS(ph)SDLEETAGSTSIPK ddPTM_KYSE-520_SHP099_60min_R1 1 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 2 S(0.411)FS(0.6)KEELMS(0.852)S(0.136)DLEETAGSTSIPK 95.87799999999999 0.0016082999999999998 1233400000.0 833120.0 761150.0 644130.0 738730.0 720180.0 571890.0 694650.0 796760.0 851500.0 729180.0 True False 786905.1728164541 724583.2114905585 685651.6504444395 808938.6770927269 776854.0687363256 568320.622378176 764872.0011306828 793996.225525181 696889.0645682069 722720.0324934558 1.0888105178177407 1.0025780093443302 0.9487099009541403 1.119297432924072 1.074903190459661 0.7863634558701984 1.0583240629041353 1.0986221355810704 0.964258680036681 1.0 19.463077358188375 -4.259050687059348 22.809738544176476 1.0076684596964562 1.0888106053091922 0.06967336718423789 0.09068695720293884 206.44787062381664 1970906.9672961114 0.022964934928316878 0.14796814544776735 5.5074341469241075e-05 4.259050687059348 0.08114214561273592 SFS(ph)KEVEER ddPTM_KYSE-520_SHP099_60min_R1 12 SFSKEVEER 9 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 S(0.116)FS(0.884)KEVEER;S(0.159)FS(0.841)KEVEER;S(0.159)FS(0.841)KEVEER;S(0.001)FS(0.999)KEVEER;S(0.004)FS(0.996)KEVEER;S(0.371)FS(0.629)KEVEER;S(0.054)FS(0.946)KEVEER;S(0.012)FS(0.988)KEVEER;S(0.003)FS(0.997)KEVEER;SFS(1)KEVEER;SFS(1)KEVEER;S(0.405)FS(0.595)KEVEER 157.03 0.00027606 34223180000.0 49863620.0 46780950.0 44479350.0 39092770.0 43475800.0 40629210.0 36668000.0 39359970.0 54711430.0 37496340.0 True False 47097585.59793794 44533522.94236247 47346560.07047632 42808135.10713013 46897098.116535805 40375628.02974977 40374759.28519376 39223439.45075609 44777213.474913605 37164151.599311054 1.2672853696682003 1.198292468034923 1.2739846877428525 1.1518663352972573 1.2618907226017553 1.0864132851750141 1.0863899093001823 1.0554105976546282 1.2048496076994715 1.0 25.147408338084496 -6.269592479441314 24.84691957038529 1.0900619104931493 1.2268945693271547 0.6032297689621389 0.058340224516674026 395.8466441285253 1206355.8617596738 0.01919103913895191 0.01722462141870798 5.375359570692068e-07 6.269592479441314 0.13683265883400542 SFS(ph)LEGLTGGAGVGNKPSSSLEVSSANAEELR ddPTM_KYSE-520_SHP099_60min_R1 1 SFSLEGLTGGAGVGNKPSSSLEVSSANAEELR 32 1 Q12802-2;Q12802;Q12802-4;A8MYJ1;H0YMW2;A0A087WTD7;A0A087WY36;H0YLH1 Q12802-2 AKAP13 A-kinase anchor protein 13 1 S(0.156)FS(0.844)LEGLTGGAGVGNKPSSSLEVSSANAEELR 204.96 2.5636999999999996e-16 1472100000.0 296810.0 307070.0 222140.0 250160.0 213750.0 248370.0 265840.0 325720.0 330370.0 345350.0 True False 280345.3576239341 292317.8962785333 236459.49983656683 273935.13118665316 230570.9089288647 246819.83070182643 292713.70154837775 324590.1533436192 270383.1359499692 342290.46767823456 0.8190276507713586 0.854005366440186 0.6908153225547821 0.8003002042235138 0.6736118317662579 0.7210829807093723 0.8551617096843586 0.9482886144779985 0.7899230667566797 1.0 18.384861590258627 -6.926410606202668 4.9055539007097835 0.9021116964436238 0.7594334386794399 0.4795787371277248 0.07221909210592727 0.1896338636247327 8.454081627092666 0.03141100344899527 0.02067805340818829 1.1846481861243702e-07 6.926410606202668 -0.14267825776418386 SFS(ph)MHDLTTIQGDEPVGQRPYQPLPEAK ddPTM_KYSE-520_SHP099_60min_R1 2 SFSMHDLTTIQGDEPVGQRPYQPLPEAK 28 1 Q6NUK4 Q6NUK4 REEP3 Receptor expression-enhancing protein 3 1 SFS(0.994)MHDLT(0.006)TIQGDEPVGQRPYQPLPEAK;SFS(0.985)MHDLT(0.015)TIQGDEPVGQRPYQPLPEAK 346.65 4.799499999999999e-79 6620800000.0 1706160.0 2195280.0 2164100.0 2618600.0 1823800.0 1841790.0 2378200.0 2426300.0 2546700.0 1889280.0 True False 1611515.9036543616 2089815.4536175418 2303601.3486824264 2867470.9566891994 1967322.6839974886 1830294.7054326897 2618611.6649953043 2417883.73160268 2084283.4770826239 1872542.4490375996 0.8606031358501947 1.1160310169158572 1.2301998012735953 1.5313249417458852 1.0506158004634831 0.9774382985941796 1.3984257960833677 1.2912303979252169 1.1130767573006686 1.0 20.836566993120023 -4.321879592369163 2.7328208091525026 1.2140967272368384 0.8179773248741616 0.26579977448979797 0.16734997877665717 0.5040422017925783 5.527218307855234 0.044334651871947135 0.4203981561976515 4.7656309504492143e-05 4.321879592369163 -0.39611940236267673 SFS(ph)MQDLR ddPTM_KYSE-520_SHP099_60min_R1 7 SFSMQDLR 8 0 E5RGS2;Q9H6H4 E5RGS2 REEP4 Receptor expression-enhancing protein;Receptor expression-enhancing protein 4 1 S(0.156)FS(0.844)MQDLR;S(0.041)FS(0.959)MQDLR;S(0.002)FS(0.998)MQDLR;SFS(1)MQDLR;SFS(1)MQDLR;S(0.001)FS(0.999)MQDLR;S(0.081)FS(0.919)MQDLR 150.59 0.00040803 5011750000.0 8074360.0 7553090.0 7096450.0 7347890.0 7163530.0 7501230.0 7322110.0 7945560.0 8949280.0 7104830.0 True False 7626459.154962401 7190228.21898078 7553898.521721457 8046231.256376325 7727259.056089782 7454412.041130008 8062300.335707174 7917998.706867653 7324316.344989971 7041886.733674097 1.0830136074885863 1.021065588089811 1.0727094608890733 1.1426243506444775 1.0973279389937152 1.0585816448144825 1.1449062787609872 1.1244143801694528 1.0401070937374362 1.0 22.747530591458354 -5.000094014392015 24.99999922902415 1.0947865048804808 1.0507515697719445 0.06607222823312087 0.0457076898251654 6.479436915211262 1725144.6967261827 0.011478610949515126 0.02350772772723727 9.997835472916868e-06 5.000094014392015 -0.04403493510853629 SFS(ph)MQDLTLIR ddPTM_KYSE-520_SHP099_60min_R1 1 SFSMQDLTLIR 11 0 A0A087WV88;B4DE60;Q9BRK0;Q9BRK0-2 A0A087WV88 REEP2 Receptor expression-enhancing protein;Receptor expression-enhancing protein 2 1 S(0.015)FS(0.985)MQDLTLIR 121.18 0.00043348 0.0 48954.0 57562.0 38735.0 42175.0 44416.0 53316.0 44406.0 61777.0 51655.0 52498.0 True False 46238.42403262044 54796.63511767651 41231.92007819129 46183.29931962387 47911.286507529585 52983.23506743395 48894.99184079619 61562.7100058602 42275.75411658337 52032.90856282595 0.8886380813555887 1.0531149734117509 0.7924200514066352 0.887578661182488 0.9207881671592545 1.0182639512350256 0.9396936129710882 1.1831495049239409 0.8124810871477322 1.0 15.667136733642511 -6.186010879672156 5.247969775531045 0.9988945402996848 0.9077904788342726 0.13369961133492236 0.10385881544273262 0.4342066980174106 21.700098790916606 0.03348787371777714 0.03334999845506334 6.516120700807089e-07 6.186010879672156 -0.09110406146541228 SFS(ph)MQDLTTIR ddPTM_KYSE-520_SHP099_60min_R1 4 SFSMQDLTTIR 11 0 A0A2R8Y6K6;A0A1C7CYY3;A0A2R8YD64;A0A2R8Y5P1;Q9H902-2;Q9H902;Q9H902-3 A0A2R8Y6K6 REEP1 Receptor expression-enhancing protein 1 1 S(0.06)FS(0.94)MQDLTTIR;SFS(1)MQDLTTIR;SFS(1)MQDLTTIR;S(0.02)FS(0.98)MQDLTTIR 189.61 8.456200000000001e-07 745920000.0 950185.0 749600.0 711171.0 621175.0 686040.0 801123.0 685041.0 825955.0 1018007.0 805128.0 True False 897476.343903162 713588.0908274612 757014.2205738316 680211.2852369264 740027.4449663545 796122.8941955119 754291.6296358805 823089.9548843466 833162.5906680987 797995.1923001047 1.1246638483075537 0.8942260526290237 0.9486450894420161 0.8524002297260923 0.9273582749707219 0.9976537476382582 0.9452333007943882 1.031447260367459 1.0440696870198292 1.0 19.60602052907279 -7.262017132325443 24.535141498846187 1.0283188607351543 0.9496471150124415 0.17290798239923644 0.06858648300175017 64.0065538147523 2717930.077960827 0.03467534988098712 0.018257960300578503 5.4699438428534925e-08 7.262017132325443 -0.07867174572271285 SFS(ph)PKS(ph)PLELGEK ddPTM_KYSE-520_SHP099_60min_R1 1 SFSPKSPLELGEK 13 1 Q15742;Q15742-2;Q15742-3 Q15742 NAB2 NGFI-A-binding protein 2 2 S(0.111)FS(0.906)PKS(0.983)PLELGEK 87.51899999999999 0.010075 430800000.0 683590.0 620990.0 478370.0 518330.0 541060.0 707350.0 718740.0 773500.0 1024100.0 774760.0 True False 645669.8999971187 591156.7082750069 509206.4956190622 567591.9273584032 583638.3437897138 702935.1662718402 791397.2534264249 770816.909036258 838149.25546013 767896.2291541587 0.840829627081679 0.7698393166042353 0.6631188906604679 0.739151861682676 0.7600484565897584 0.9154038522185824 1.0306044272390198 1.0038034825165327 1.0914876563248075 1.0 19.550551837727184 -6.454354899233916 2.2097454450417784 1.0343650492730057 0.7463718232053279 0.8853309586203133 0.04708060963060269 0.101582508295768 0.9834366149802263 0.02085532548696897 0.0168961380336327 3.512732677214342e-07 6.454354899233916 -0.28799322606767774 SFS(ph)PLQPGQAPTGR ddPTM_KYSE-520_SHP099_60min_R1 1 SFSPLQPGQAPTGR 14 0 Q7Z3C6;H7C152;Q7Z3C6-2;H7C1G6 Q7Z3C6 ATG9A Autophagy-related protein 9A 1 S(0.005)FS(0.995)PLQPGQAPTGR 118.21 0.00011763 718790000.0 664350.0 640600.0 556400.0 466880.0 628690.0 574020.0 689240.0 660320.0 788560.0 649740.0 True False 627497.1811511088 609824.6144397961 592266.4342714767 511252.1348274094 678164.3262432178 570437.3282580923 758915.1055341705 658029.5040398462 645377.381979924 643983.8090900703 0.974399002418622 0.9469564387052833 0.9196914983131816 0.793889733889107 1.0530766716036597 0.8857945187536671 1.178469232955553 1.0218106336704678 1.0021639874639439 1.0 19.29666489128742 -6.733179678421438 24.999997882181905 1.0524286909005311 0.928865345550268 0.3713908092968089 0.07751502022638837 226.43205262333944 200313.2863530342 0.029260791837906548 0.02266049054009504 1.8485036888335417e-07 6.733179678421438 -0.12356334535026314 SFS(ph)PTMK ddPTM_KYSE-520_SHP099_60min_R1 6 SFSPTMK 7 0 A3KN83-3;A3KN83-2;A3KN83;A3KN83-4 A3KN83-3 SBNO1 Protein strawberry notch homolog 1 1 S(0.002)FS(0.986)PT(0.013)MK;S(0.001)FS(0.5)PT(0.5)MK;SFS(0.94)PT(0.06)MK;SFS(0.73)PT(0.27)MK;SFS(0.996)PT(0.004)MK;SFS(0.998)PT(0.002)MK 150.36 0.0013399 6677740000.0 14985490.0 13379830.0 11999030.0 11213430.0 11750260.0 12651870.0 11674000.0 12783680.0 15448320.0 12483060.0 True False 14154214.996866291 12737042.883265717 12772506.672926793 12279151.015759345 12674938.612165997 12572904.986357117 12854121.84726063 12739336.397813337 12643294.508456036 12372469.800073726 1.144008853978528 1.029466475900375 1.0323328227360622 0.9924575460015409 1.0244469226419504 1.0162000950111187 1.038929337066075 1.0296518483106278 1.0218893004192822 1.0 23.560630184950536 -4.250413343877274 3.7690419820678884 1.0207408280760109 1.1581838733279979 0.8835862746578893 0.013473407597100457 0.0872129908879104 2.3472059179963556 0.0034290569559224356 0.033847098022253 5.6180636613647195e-05 4.250413343877274 0.13744304525198703 SFS(ph)QPEAGGS(ph)HHK ddPTM_KYSE-520_SHP099_60min_R1 3 SFSQPEAGGSHHK 13 0 B7WPG3;C9IYN3;V9GYK2;Q8WVV9-3;Q8WVV9-2;Q8WVV9-5;Q8WVV9-4;Q8WVV9 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 2 S(0.108)FS(0.892)QPEAGGS(1)HHK;S(0.403)FS(0.599)QPEAGGS(0.998)HHK;S(0.379)FS(0.621)QPEAGGS(1)HHK 72.615 0.018328 1624950000.0 3812680.0 3739530.0 4315460.0 3150180.0 5960480.0 3159830.0 2520060.0 3125880.0 3706560.0 3382570.0 True False 3601183.0400108523 3559877.3656510366 4593641.456580133 3449572.160063846 6429535.865507928 3140108.328890578 2774812.25821549 3115037.0518658753 3033542.1387738497 3352603.0613996387 1.0741453652754933 1.0618248866493802 1.370171586809441 1.028923525060472 1.917774263089689 0.9366179864966332 0.827659048028509 0.9291398339788591 0.9048318823366498 1.0 21.676850251605984 -6.480934149763451 24.99991218651903 0.9055927570418828 1.2836915810374656 0.37082945737178774 0.24147925011638635 533.103817245642 317742.052683631 0.08447804755696363 0.07449552328379329 3.304196373717178e-07 6.480934149763451 0.3780988239955828 SFS(ph)QPGLR ddPTM_KYSE-520_SHP099_60min_R1 6 SFSQPGLR 8 0 Q86TI0-2;Q86TI0;C9JIE2 Q86TI0-2 TBC1D1 TBC1 domain family member 1 1 S(0.025)FS(0.975)QPGLR;SFS(1)QPGLR;S(0.004)FS(0.996)QPGLR;SFS(1)QPGLR;SFS(1)QPGLR;S(0.002)FS(0.998)QPGLR 153.7 0.00034321 5528110000.0 4458370.0 4006360.0 3529110.0 3503660.0 3661600.0 3885810.0 3619420.0 3769420.0 4813340.0 3855190.0 True False 4211055.328559752 3813888.451931036 3756602.077375647 3836646.7929862086 3949747.0883458713 3861557.2184219663 3985306.295735142 3756344.7618092434 3939358.7904271665 3821036.0158924297 1.102071613835922 0.9981294172754024 0.9831370502008384 1.0040854828451893 1.0336848624085477 1.010604768539475 1.0429910315316266 0.9830697083685883 1.0309661500291045 1.0 21.865532425476683 -4.25695224448743 24.9142972404071 1.0099243216466751 1.102071652664474 0.668605618851333 0.019523382899097542 259.33930706620094 1439898.664912394 0.004870873735597933 0.03675719756923193 5.5341095956530466e-05 4.25695224448743 0.09214733101779893 SFS(ph)SPENFQR ddPTM_KYSE-520_SHP099_60min_R1 3 SFSSPENFQR 10 0 G3V1T9;J3KPD3;Q9Y580;I3L521;F5GXV8;F5GY08 G3V1T9 RBM7 RNA-binding protein 7 1 SFS(0.5)S(0.5)PENFQR;S(0.002)FS(0.816)S(0.182)PENFQR;S(0.003)FS(0.923)S(0.073)PENFQR 210.95 5.4529e-09 1260120000.0 835800.0 849110.0 780920.0 728403.0 896970.0 1083610.0 955070.0 1100660.0 1191050.0 967330.0 True False 789436.5078740065 808317.4810599057 831259.3527161784 797630.2021176515 967556.4359388248 1076846.78804528 1051617.7961849591 1096842.0673559746 974785.3439271441 958760.208771351 0.8233930660156074 0.84308617907262 0.8670148647297694 0.8319392010853399 1.0091745851433969 1.1231659159335123 1.0968517326481508 1.1440212655066015 1.0167144349642223 1.0 19.870810508789425 -5.886360117508084 3.43342010865037 1.085498037884694 0.8423564970089531 0.867922699783272 0.04321731957311734 0.07557092640685767 1.7428578811247193 0.013550681828092175 0.01566723482206481 1.2990919227096824e-06 5.886360117508084 -0.2431415408757408 SFS(ph)SPPS(ph)PSNKR ddPTM_KYSE-520_SHP099_60min_R1 2 SFSSPPSPSNKR 12 1 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 2 S(0.015)FS(0.984)S(0.001)PPS(0.919)PS(0.08)NKR;S(0.161)FS(0.799)S(0.047)PPS(0.845)PS(0.148)NKR 106.36 0.00041592 1273720000.0 4709500.0 4147900.0 3768100.0 4387900.0 4332500.0 4125900.0 4203200.0 4558100.0 5424100.0 4265300.0 True False 4448254.646844506 3948628.657875164 4010997.755173168 4804924.696729759 4673443.10144705 4100148.7276751087 4628100.475278899 4542289.014968533 4439220.170433839 4227512.760353186 1.052215545878773 0.934031162461891 0.948784304754664 1.1365843154376032 1.1054829083606619 0.969872584685602 1.0947573047401626 1.0744589720857636 1.0500784792576157 1.0 22.0113776786065 -5.241003113353712 24.797857230746924 1.064094815904836 0.9739124137840349 0.32848984743274046 0.0543608870048851 814.1098110941036 987859.230943896 0.01471677503161727 0.025450531611788774 5.7411234651788975e-06 5.241003113353712 -0.09018240212080109 SFS(ph)SQRPGMER ddPTM_KYSE-520_SHP099_60min_R1 3 SFSSQRPGMER 11 1 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 SFS(0.915)S(0.085)QRPGMER;S(0.148)FS(0.812)S(0.04)QRPGMER;SFS(0.5)S(0.5)QRPGMER 126.56 0.00011698 5127000000.0 5082290.0 5113900.0 5185820.0 4564780.0 4943620.0 4783070.0 4880230.0 4831110.0 5988520.0 4958360.0 True False 4800365.24240606 4868220.567879604 5520106.254805374 4998615.318748846 5332654.768649891 4753217.085940265 5373571.274854944 4814352.0069995485 4901155.726304172 4914432.787945709 0.9767892754949385 0.9905966319898695 1.1232438193773413 1.0171296534993057 1.0851007631501262 0.9671954610100927 1.0934265472172955 0.9796353342766957 0.9972983531946751 1.0 22.228593483094514 SFS(ph)SQRPVDR ddPTM_KYSE-520_SHP099_60min_R1 4 SFSSQRPVDR 10 1 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3;H7C5N8 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.05)FS(0.941)S(0.01)QRPVDR;S(0.008)FS(0.961)S(0.031)QRPVDR;S(0.107)FS(0.87)S(0.022)QRPVDR;S(0.095)FS(0.888)S(0.017)QRPVDR 155.86 6.9755e-05 10328200000.0 6687030.0 6455880.0 6592080.0 6305800.0 6351870.0 5429710.0 6065660.0 6538030.0 7849240.0 6424580.0 True False 6316087.115636178 6145729.834326558 7017016.024500919 6905101.336092095 6851726.031803456 5395821.165841344 6678836.107936852 6515351.099917675 6424015.8792382255 6367663.219447611 0.9919003091033595 0.9651468085744168 1.1019766251252274 1.0844011528441209 1.0760189092409063 0.8473785405864204 1.0488676737078182 1.0231934189011453 1.0088498178764396 1.0 22.602332604250766 SFS(ph)SQRPVVDR ddPTM_KYSE-520_SHP099_60min_R1 2 SFSSQRPVVDR 11 1 Q5JSZ5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 S(0.086)FS(0.892)S(0.022)QRPVVDR;S(0.087)FS(0.876)S(0.037)QRPVVDR 125.73 0.00012128 1114920000.0 1364160.0 1071640.0 1115090.0 1074890.0 1080000.0 1123000.0 1003200.0 1249820.0 1272180.0 1121680.0 True False 1288487.3254144606 1020156.8058355651 1186970.4856070825 1177047.2224225379 1164989.8556405783 1115990.940444301 1104613.2462884912 1245484.6661301807 1041184.1810480113 1111742.7878538352 1.1589797024020476 0.9176194502731407 1.0676664589823612 1.0587405965500074 1.0478951321910834 1.003821164964485 0.9935870584066417 1.120299299206184 0.9365333352492138 1.0 20.084391614929938 -6.2470101980654835 22.98688491694781 1.0172880585062956 1.0442628102015519 0.06750293377998373 0.06938562544394697 1171.8258786257206 1866813.2352605925 0.02188805670306517 0.02176754805454175 5.66225992812325e-07 6.2470101980654835 0.026974751695256316 SFS(ph)SSAEEHS ddPTM_KYSE-520_SHP099_60min_R1 1 SFSSSAEEHS 10 0 Q96EQ0 Q96EQ0 SGTB Small glutamine-rich tetratricopeptide repeat-containing protein beta 1 S(0.156)FS(0.832)S(0.006)S(0.006)AEEHS 135.55 0.0002847 352330000.0 292160.0 317330.0 339120.0 430780.0 386130.0 545740.0 502220.0 587570.0 749660.0 690570.0 True False 275953.3023934794 302084.99047795904 360980.2178111842 471721.20168127 416516.23422083043 542333.8342280263 552989.2987948621 585531.8568098684 613540.641390724 684452.0870553293 0.40317402432169375 0.4413530124184416 0.5274002733547125 0.6891953587441355 0.6085396510554585 0.7923620140618922 0.8079298891087462 0.8554753033612059 0.896396771949834 1.0 19.3845900280646 -4.939050475740136 0.2737262971148915 1.0202883114238885 0.037337883515698736 0.9630911363597515 0.03676176612780632 1.0035313819787006 0.08475074427315281 0.049180061029026494 0.3248274651523515 1.1506666453019739e-05 4.939050475740136 -0.9829504279081898 down SFSKEELMS(ph)S(ph)DLEETAGSTSIPK ddPTM_KYSE-520_SHP099_60min_R1 3 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 2 S(0.011)FS(0.017)KEELMS(0.989)S(0.983)DLEETAGSTSIPK;S(0.184)FS(0.202)KEELMS(0.837)S(0.775)DLEET(0.003)AGSTSIPK;S(0.019)FS(0.022)KEELMS(0.981)S(0.978)DLEETAGSTSIPK 153.25 1.8672999999999998e-07 647400000.0 943390.0 1018910.0 1024810.0 836060.0 946110.0 778330.0 749580.0 792950.0 1321020.0 879200.0 True False 891058.2760986589 969960.0341849097 1090870.8923539747 915518.8910293953 1020563.4743704712 773472.1537631456 825354.8615958204 790199.4415259211 1081156.0682042183 871410.9720072502 1.0225465420135258 1.1130913717446738 1.251844339119589 1.0506166670366162 1.171162066068156 0.8876089223222567 0.9471476583484577 0.9068045582507843 1.240695955105811 1.0 19.73299375289622 -6.247067905541773 24.857236997489192 0.9875452140178216 1.1246297427460528 0.2497992543724209 0.10805534263987202 1010.5397377241097 1747854.3956501973 0.03547867706575487 0.035315793014856926 5.66150759753622e-07 6.247067905541773 0.13708452872823118 SFSKEELMS(ph)SDLEETAGSTSIPK ddPTM_KYSE-520_SHP099_60min_R1 2 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 1 SFS(0.001)KEELMS(0.5)S(0.5)DLEETAGSTSIPK;S(0.13)FS(0.13)KEELMS(0.37)S(0.37)DLEETAGSTSIPK 123.89 8.2499e-05 2082050000.0 1461580.0 1736420.0 1741920.0 1202620.0 1351160.0 1167300.0 1056260.0 1143390.0 2195370.0 1311860.0 True False 1380503.2438125059 1652999.7767804419 1854206.9503705455 1316916.6432191127 1457488.6049512273 1160014.4477120494 1163037.0689041887 1139423.8469592317 1796746.1487740506 1300237.9410116351 1.0617312418513347 1.2713056007997616 1.4260520262375218 1.0128274231057286 1.1209399133648148 0.8921555133282094 0.8944801810653988 0.8763194881643863 1.3818594982516146 1.0 20.310344227121092 -5.294949239703941 22.825653384612032 1.013318255320016 1.2548571795939816 0.291206203681606 0.1618734433792874 256.5350353591339 174741.2060803122 0.045988247504290945 0.06822006164997381 5.070499687616187e-06 5.294949239703941 0.24153892427396562 SFSKEELMSS(ph)DLEETAGSTSIPK ddPTM_KYSE-520_SHP099_60min_R1 10 SFSKEELMSSDLEETAGSTSIPK 23 1 O00567 O00567 NOP56 Nucleolar protein 56 1 S(0.001)FS(0.004)KEELMS(0.399)S(0.596)DLEETAGSTSIPK;S(0.001)FS(0.001)KEELMS(0.119)S(0.878)DLEETAGSTSIPK;S(0.001)FS(0.001)KEELMS(0.074)S(0.923)DLEETAGSTSIPK;S(0.006)FS(0.006)KEELMS(0.096)S(0.893)DLEETAGSTSIPK;S(0.003)FS(0.003)KEELMS(0.076)S(0.918)DLEETAGSTSIPK;SFSKEELMS(0.075)S(0.924)DLEETAGSTSIPK;S(0.001)FS(0.005)KEELMS(0.065)S(0.93)DLEETAGSTSIPK;SFSKEELMS(0.096)S(0.904)DLEETAGSTSIPK;SFSKEELMS(0.06)S(0.94)DLEETAGSTSIPK;S(0.001)FS(0.001)KEELMS(0.107)S(0.892)DLEETAGSTSIPK 277.71 2.8597e-38 25324720000.0 6671240.0 7695410.0 7069860.0 5491622.0 5805690.0 5243350.0 4768759.0 5050430.0 9104740.0 5231351.0 True False 6301173.018412769 7325710.952554095 7525594.487775957 6013544.103763636 6262564.773142549 5210624.307728073 5250831.698322828 5032911.237109221 7451548.727817654 5185005.30006949 1.2152683852277488 1.4128646989919016 1.451415003891143 1.1597951700614542 1.207822251031955 1.0049409800329883 1.0126955315267383 0.970666555932309 1.4371342547553012 1.0 22.305914033074355 -5.552128838282683 2.161400416797251 1.088771730737951 1.3623647836517463 0.37678801012292484 0.1435748557885966 0.3162761082957754 2.977276739499168 0.04575971068278367 0.06863611465854388 2.80460149833497e-06 5.552128838282683 0.2735930529137953 SFSLASSSNS(ph)PISQR ddPTM_KYSE-520_SHP099_60min_R1 7 SFSLASSSNSPISQR 15 0 Q9BXB4 Q9BXB4 OSBPL11 Oxysterol-binding protein-related protein 11 1 SFSLASS(0.002)S(0.001)NS(0.997)PISQR;SFSLASSS(0.001)NS(0.998)PISQR;SFSLASS(0.002)S(0.001)NS(0.998)PISQR;SFSLAS(0.001)S(0.003)S(0.012)NS(0.984)PISQR;SFSLASSSNS(1)PISQR;SFSLASS(0.001)S(0.001)NS(0.998)PISQR;SFSLAS(0.115)S(0.075)S(0.075)NS(0.734)PIS(0.002)QR 284.07 5.806899999999999e-33 16588550000.0 14536960.0 15134180.0 12274790.0 10353900.0 9776770.0 12169790.0 10211040.0 10199750.0 14401250.0 11103360.0 True False 13730565.85008867 14407111.27593268 13066042.60375842 11337931.542986453 10546146.176788097 12093833.826455612 11243271.573346928 10164369.447889557 11786346.025969347 11004992.868683364 1.247666946623964 1.3091431723623048 1.1872831504452979 1.0302534202680425 0.9583055893474501 1.0989406327441371 1.0216518727005837 0.923614360243163 1.0709998785650703 1.0 23.39165487456427 -5.13898700602868 2.7663969018237515 1.0113781040952854 1.2766775873924476 0.8298725321490278 0.04947594184317823 0.10169704805526224 1.5010876917389708 0.01408812520652533 0.02808296403883286 7.2612768265048e-06 5.13898700602868 0.26529948329716224 SFSLEGLT(ph)GGAGVGNKPSSSLEVSSANAEELR ddPTM_KYSE-520_SHP099_60min_R1 1 SFSLEGLTGGAGVGNKPSSSLEVSSANAEELR 32 1 Q12802-2;Q12802;Q12802-4;A8MYJ1;H0YMW2;A0A087WTD7;A0A087WY36;H0YLH1 Q12802-2 AKAP13 A-kinase anchor protein 13 1 S(0.006)FS(0.442)LEGLT(0.552)GGAGVGNKPSSSLEVSSANAEELR 249.93 5.1621e-31 1499700000.0 175170.0 220550.0 146690.0 162160.0 166590.0 206400.0 171740.0 203430.0 233550.0 223170.0 True False 165452.97090726238 209954.4469477007 156145.87211229862 177571.63764481805 179699.68523255916 205111.78103980722 189101.15522087892 202724.3488109189 191143.2073163885 221192.88742363272 0.7480031244873792 0.9491916733542703 0.705926279687489 0.802790902153782 0.8124116798041294 0.9272982663632097 0.8549151712039857 0.916504826046497 0.8641471683052243 1.0 17.754945470119605 -6.247797908424688 20.027324916349716 0.9037510004915446 0.806270959125998 0.3790903555772276 0.06919158306332579 67.21704049900548 98681.39552099947 0.02196685595951794 0.021762507763990847 5.651999198308932e-07 6.247797908424688 -0.09748004136554655 SFSMHDLT(ph)TIQGDEPVGQRPYQPLPEAK ddPTM_KYSE-520_SHP099_60min_R1 1 SFSMHDLTTIQGDEPVGQRPYQPLPEAK 28 1 Q6NUK4 Q6NUK4 REEP3 Receptor expression-enhancing protein 3 1 S(0.001)FS(0.22)MHDLT(0.662)T(0.117)IQGDEPVGQRPYQPLPEAK 245.31 1.1799e-30 616490000.0 265940.0 289240.0 238760.0 293570.0 230700.0 244640.0 259420.0 251860.0 328730.0 269740.0 True False 251187.77806175337 275344.4762419087 254150.85162950694 321470.80453496083 248854.77749655684 243113.1110153996 285644.70529521565 250986.3564445658 269040.91860893345 267350.3134545446 0.9395454780510695 1.029901452831935 0.9506285904269873 1.2024328693731565 0.9308190975391081 0.909342906219312 1.0684285408319953 0.9387920784586588 1.0063235577790945 1.0 18.028371842660352 SFSNYRPFEPQALGLS(ph)PSWR ddPTM_KYSE-520_SHP099_60min_R1 1 SFSNYRPFEPQALGLSPSWR 20 1 Q99611 Q99611 SEPHS2 Selenide, water dikinase 2 1 SFSNYRPFEPQALGLS(0.988)PS(0.012)WR 58.418 0.022264 169230000.0 107200.0 105500.0 75788.0 89531.0 95124.0 85523.0 97220.0 100410.0 132770.0 92891.0 True False 101253.40230209807 100431.62164127144 80673.41574508742 98039.99932152336 102609.71761847641 84989.219233854 107047.94637576478 100061.70114587019 108662.31485933161 92068.05800810437 1.0997668951938266 1.0908410996616313 0.876236748015105 1.064864421414138 1.114498555073727 0.9231129782966939 1.1627045111165675 1.086823196999139 1.1802390232860838 1.0 16.490413095623985 -6.790899233034651 24.999726806842965 1.1146769295461327 1.029745458186789 0.16986500279982963 0.0851582263602799 367.5044393314003 311862.1973373823 0.03517436725568481 0.023718707105382368 1.6184555154329704e-07 6.790899233034651 -0.08493147135934365 SFSS(ph)PENFQR ddPTM_KYSE-520_SHP099_60min_R1 3 SFSSPENFQR 10 0 G3V1T9;J3KPD3;Q9Y580;I3L521;F5GXV8;F5GY08 G3V1T9 RBM7 RNA-binding protein 7 1 SFS(0.076)S(0.924)PENFQR;SFS(0.077)S(0.923)PENFQR;SFS(0.035)S(0.965)PENFQR 110.08 0.001051 498830000.0 1249380.0 1141390.0 1092160.0 1078560.0 1057220.0 1149870.0 987260.0 1071770.0 1265510.0 1004330.0 True False 1180074.4008227175 1086555.9111386805 1162562.3811177842 1181066.0181191117 1140417.1992410477 1142693.234807381 1087061.8755290825 1068052.2800229993 1035725.2849109948 995432.4175569157 1.1854892205730727 1.0915416174665165 1.1678968462480404 1.1864853879460702 1.1456500502967015 1.1479365295455082 1.0920499034952593 1.0729530816811392 1.0404777528272282 1.0 19.924963845465257 -7.367889584351049 0.9392296463431259 1.0049664045424151 1.1562209657091969 0.8139377183874408 0.02605529358376639 0.23588580436651824 0.37749728960560125 0.024133751810116358 0.009565151000505824 4.2865748903652e-08 7.367889584351049 0.1512545611667817 SFSS(ph)QRPGMER ddPTM_KYSE-520_SHP099_60min_R1 1 SFSSQRPGMER 11 1 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 SFS(0.096)S(0.904)QRPGMER 83.182 0.009609600000000001 1854100000.0 1350200.0 1245100.0 1442400.0 1335700.0 1298300.0 1425200.0 1305900.0 1322300.0 1660800.0 1419700.0 True False 1275301.714443031 1185283.527066798 1535379.4119215985 1462644.5264071529 1400468.8236834847 1416304.798148903 1437913.116355801 1317713.2499271396 1359240.585360985 1407122.562509885 0.9063188583717078 0.8423456198105496 1.0911483141759462 1.0394578023098666 0.9952713864423209 1.0065255407621634 1.0218819274640831 0.9364594705785501 0.9659717082046549 1.0 20.424316564298284 -4.746592326191431 24.999999480283247 1.0060623121916783 0.8743321874340686 0.6202932260708518 0.041541170668284985 161.81062555938604 272458.03837342403 0.011249125416381147 0.02949166397711879 1.792287491414359e-05 4.746592326191431 -0.1317301247576097 SFSSPPS(ph)PSNK ddPTM_KYSE-520_SHP099_60min_R1 1 SFSSPPSPSNK 11 0 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 SFSS(0.002)PPS(0.964)PS(0.034)NK 90.79299999999999 0.0028904 555140000.0 1071100.0 997800.0 810010.0 757970.0 852720.0 1156900.0 977090.0 1197000.0 1404900.0 1328300.0 True False 1011683.9478150869 949864.1902716648 862224.5406618244 830007.2409080089 919824.2126868836 1149679.3579697353 1075863.792679449 1192847.8863818995 1149805.5746469463 1316532.295401764 0.7684459783847178 0.7214894716895617 0.6549209188967907 0.6304495862402805 0.6986719702202082 0.873263316050207 0.8171951394106359 0.906052886471638 0.8733591866016943 1.0 20.32831148139899 -6.267842702421697 4.457255780231709 0.8852433938667927 0.6891741258884521 0.7652633176502903 0.05507060661647077 0.10501301377660348 5.530913097021259 0.019849197449875476 0.018441503872896312 5.397060638302313e-07 6.267842702421697 -0.19606926797834068 SFSSPPS(ph)PSNKR ddPTM_KYSE-520_SHP099_60min_R1 2 SFSSPPSPSNKR 12 1 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 SFSSPPS(0.999)PS(0.001)NKR;SFS(0.017)S(0.071)PPS(0.903)PS(0.009)NKR 145.1 2.8943e-05 13860200000.0 1598470.0 1347200.0 1153200.0 1323210.0 1399500.0 1371660.0 1435340.0 1565760.0 1717480.0 1442920.0 True False 1509799.6826290542 1282478.4898115734 1227537.1171852383 1448967.4805624073 1509632.6879342508 1363098.9611485568 1580438.1747684637 1560328.7440111295 1405628.92614751 1430136.8513747717 1.0557029428181672 0.8967522853346124 0.8583354215404093 1.0131670120726797 1.0555861744860715 0.9531248424500269 1.10509576286298 1.0910345695317243 0.9828632307434757 1.0 20.447721776015282 -5.459148676277433 8.7071427563568 1.0355261534876365 0.9330631355409233 0.30236759809017344 0.0641044754372488 0.4503929402274419 58.20993712870346 0.018239742184751988 0.027011891669304084 3.4741720635281235e-06 5.459148676277433 -0.1024630179467132 SFT(ph)PDHVVYAR ddPTM_KYSE-520_SHP099_60min_R1 6 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 1 S(0.046)FT(0.954)PDHVVYAR;S(0.013)FT(0.987)PDHVVYAR;S(0.077)FT(0.923)PDHVVYAR;S(0.024)FT(0.976)PDHVVYAR;S(0.234)FT(0.766)PDHVVYAR;S(0.003)FT(0.997)PDHVVYAR 174.72 1.151e-05 12364030000.0 6237670.0 6658390.0 5921230.0 7547700.0 5476710.0 5484500.0 5451160.0 5927250.0 6613990.0 5763930.0 True False 5891654.010613139 6338510.949952846 6302921.960102967 8265031.138701249 5907695.918782706 5450269.2011280265 6002216.4509947905 5906689.753180549 5413056.141119754 5712866.064469682 1.0312956656301469 1.1095150627413217 1.1032854418385631 1.4467398754723793 1.03410369718358 0.9540341292132092 1.0506489007898645 1.0339275744474956 0.9475202254058517 1.0 22.44578327631755 -5.974716660242952 24.99971912666646 1.0017280038776668 1.1728845249388318 0.3829545567135927 0.10608964163989855 250.55629256214004 247744.43655751066 0.033840647097910445 0.038370413603034725 1.0599450225135777e-06 5.974716660242952 0.17115652106116497 SFTPDHVVY(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 5 SFTPDHVVYAR 11 0 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 1 SFTPDHVVY(1)AR;SFTPDHVVY(1)AR;SFTPDHVVY(1)AR;SFTPDHVVY(1)AR;SFTPDHVVY(1)AR 179.81 3.9904000000000006e-07 2134960000.0 3616780.0 3775340.0 3652980.0 4233140.0 3833780.0 3365960.0 3427140.0 3525940.0 3863670.0 3369790.0 True False 3416150.0035278215 3593966.999499127 3888456.9357746565 4635456.35286005 4135476.6747756796 3344951.7951005325 3773588.7568631815 3513709.3371005855 3162124.923194645 3339936.2822569497 1.0228189147427 1.0760585519525292 1.1642308736342257 1.387887660457899 1.2381902902594137 1.0015016791997582 1.1298385471932395 1.0520288532948328 0.9467620505196735 1.0 21.67138914922447 -7.050064920840852 1.1729474932917103 0.9839048626603918 1.1701929998216987 0.3164210538511856 0.10424408190965445 0.6800111966697684 1.7316811272828865 0.09177951075444349 0.04094643854380691 8.911177187670242e-08 7.050064920840852 0.18628813716130688 SFVLNLGK ddPTM_KYSE-520_SHP099_60min_R1 1 SFVLNLGK 8 0 P09382 P09382 LGALS1 Galectin-1 0 100.15 0.034816 36851000.0 151170.0 161650.0 136100.0 132570.0 159240.0 173750.0 127880.0 154440.0 162620.0 132620.0 False True 142784.2987500763 153884.09135840312 144873.2237676996 145169.41294137595 171771.2820483388 172665.5618007098 140807.35838852898 153904.28368656684 133092.3073165962 131445.08997679868 1.0862657462159986 1.1707100766226044 1.1021577435358834 1.1044110736049535 1.306791163356943 1.3135946107320322 1.071225698984898 1.1708636945946966 1.0125316003822453 1.0 17.004100726712863 -7.77421760120146 6.023904877486596 1.0025518544480545 1.168523764258572 0.38483128162575997 0.08061283700488557 0.17506274624667145 22.35727311247431 0.07470135218725386 0.021890118545011578 1.6818311763491866e-08 7.77421760120146 0.16597190981051746 SFVT(ph)PPQSHFVR ddPTM_KYSE-520_SHP099_60min_R1 2 SFVTPPQSHFVR 12 0 H0YNU5;A0A3B3IT82;P54132;H0YLV8 H0YNU5 BLM Bloom syndrome protein 1 S(0.014)FVT(0.986)PPQSHFVR;S(0.004)FVT(0.996)PPQSHFVR 118.21 0.00041536 184440000.0 564570.0 586500.0 451380.0 386080.0 446040.0 541000.0 433580.0 488980.0 605660.0 537660.0 True False 533252.1766576074 558323.6596455517 480476.6770335355 422772.9271208155 481140.8103795591 537623.4183262396 477410.49773301795 487283.8425087904 495687.41144613095 532896.750693151 1.0006669696596837 1.047714513025886 0.9016318384538252 0.7933486675812998 0.9028781086650054 1.0088697625326866 0.8958780422512225 0.9144057303313805 0.9301753309649177 1.0 19.02349651081273 -4.765323956273871 24.99837092148302 0.9127479465495348 1.0241907573201061 0.3483052003232181 0.05746937702676948 96.48185582323971 620905.9129006352 0.015603290857832833 0.034561334039722454 1.716627413745181e-05 4.765323956273871 0.11144281077057128 SGAAS(ph)MPSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 SGAASMPSSPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 2 S(0.023)GAAS(0.975)MPS(0.288)S(0.714)PK;SGAAS(0.999)MPS(0.059)S(0.942)PK;SGAAS(0.968)MPS(0.051)S(0.982)PK 113.7 0.00029396 2405430000.0 6036500.0 5711100.0 5242400.0 5250300.0 5407200.0 4797300.0 4893600.0 5300200.0 6511400.0 5033800.0 True False 5701643.311535581 5436730.183464138 5580333.492136576 5749286.933439748 5832715.877240495 4767358.27123192 5388292.8449335685 5281814.84327598 5329093.899036318 4989204.448237145 1.1427960851654746 1.0896988166891253 1.1184816236801634 1.1523454276304845 1.1690673208032978 0.9555347592372947 1.0799903874128538 1.058648708040462 1.0681249795083598 1.0 22.250378358817713 -6.242310180573817 24.99980098605345 1.0390959664986363 1.1320940947262415 0.6277359956237831 0.039093032549525134 610.216945274738 797488.4284407111 0.013070470225862215 0.013053778056441699 5.723870762868391e-07 6.242310180573817 0.09299812822760511 SGAASMPSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 SGAASMPSSPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 SGAASMPS(0.03)S(0.97)PK;SGAASMPS(0.031)S(0.969)PK;SGAASMPS(0.004)S(0.996)PK;SGAASMPS(0.056)S(0.944)PK;SGAASMPSS(1)PK;SGAASMPSS(1)PK;SGAASMPSS(1)PK;SGAASMPSS(1)PK;SGAASMPS(0.002)S(0.998)PK;SGAASMPS(0.003)S(0.997)PK 270.24 1.3221000000000001e-20 62136300000.0 59096100.0 56464160.0 42621440.0 37902560.0 40170420.0 51941020.0 42714250.0 50623170.0 60830600.0 47979880.0 True False 55817921.52784535 53751536.99916795 45368886.21911515 41504807.90657981 43331603.515575394 51616836.82763687 47032223.24090732 50447570.03880674 49785296.45463626 47554815.59098179 1.173759604241438 1.1303069170004583 0.9540334802122297 0.8727782326728379 0.9111927567603211 1.0854176635147208 0.9890107375335175 1.0608298951825506 1.0469033647998722 1.0 25.5030881057696 -4.67302972898943 5.170716261036081 0.9887543119899793 1.1615344852504006 0.5203203758755673 0.06258125131990373 0.17141259584930238 7.461660202754694 0.018070188577492423 0.04990269112078631 2.1230991234007454e-05 4.67302972898943 0.17278017326042128 SGAEGDDTGAPHS(ph)PQER ddPTM_KYSE-520_SHP099_60min_R1 1 SGAEGDDTGAPHSPQER 17 0 A0A087WXZ7;K7EIX2;Q6AI08 A0A087WXZ7 HEATR6 HEAT repeat-containing protein 6 1 SGAEGDDT(0.019)GAPHS(0.981)PQER 58.913999999999994 0.024416999999999998 59016000.0 61323.0 62807.0 45103.0 58079.0 53435.0 51188.0 49010.0 47943.0 61653.0 58360.0 True False 57921.290945630186 59789.65744477101 48010.411547351556 63598.8106979119 57640.03049643922 50868.51670477552 53964.409091506124 47776.69692298031 50458.369345653155 57842.97580339293 1.001353926577074 1.03365459010952 0.8300128214450436 1.0995079318547325 0.9964914442223112 0.8794242688632851 0.932946625618468 0.8259723200509653 0.8723335659140377 1.0 15.819854154977516 -6.258346139168158 24.99999909132539 0.8931843285281054 0.9914576416660296 0.2559797901391657 0.0760100847513984 362.6775675260064 2931216.246326473 0.025239334006851133 0.024234474154606313 5.516376006441881e-07 6.258346139168158 0.0982733131379242 SGAQAS(ph)STPLSPTR ddPTM_KYSE-520_SHP099_60min_R1 1 SGAQASSTPLSPTR 14 0 P02545-3;P02545;P02545-2;P02545-6;Q3BDU5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQAS(0.54)S(0.23)T(0.23)PLSPTR 140.27 5.9303e-06 254230000.0 412680.0 457790.0 359950.0 309720.0 305670.0 442680.0 335790.0 475220.0 493040.0 487350.0 True False 389787.81774281536 435797.0812432007 383152.9529403634 339155.69567928667 329724.4899756072 439917.0699161916 369734.9301945902 473571.5727371822 403516.36452696304 483032.4581525625 0.8069598867819842 0.9022107601422453 0.7932240297179929 0.7021385208282767 0.6826135271254711 0.9107401842077595 0.7654453110846889 0.9804135617478689 0.8353814691258598 1.0 18.881760610997627 -7.256383005557234 24.91253635209117 0.9309231383760652 0.7954201395055311 0.40518902900797416 0.07969651958563898 438.09598561859934 2158493.6814842075 0.040256072037320005 0.022317209300390578 5.541368025580928e-08 7.256383005557234 -0.13550299887053407 SGAQASS(ph)TPLS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 SGAQASSTPLSPTR 14 0 P02545-3;P02545;P02545-2;P02545-6;Q3BDU5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 SGAQAS(0.003)S(0.592)T(0.405)PLS(0.999)PT(0.001)R;SGAQAS(0.005)S(0.847)T(0.149)PLS(0.737)PT(0.263)R 219.03 6.5714e-14 3108100000.0 3797400.0 3321700.0 3112100.0 2908690.0 2943400.0 2910630.0 2957770.0 3244900.0 3828900.0 2955840.0 True False 3586750.6520707724 3162120.546026647 3312710.945536058 3185131.0230704667 3175028.8343448867 2892463.6785266185 3256770.2566534234 3233644.1992653552 3133668.2787142773 2929653.557208725 1.2242917403135227 1.0793496515128598 1.1307517700803835 1.0872039853426056 1.0837557316401423 0.987305707669565 1.1116571270482796 1.1037633413372816 1.069637831750977 1.0 21.4822986398256 -1.000000087170128 0.7930804308698047 1.0676289297232748 36.03152182443642 0.535241605657806 0.042859612277579846 403.94223376741576 1.4444540362051186 0.015304236096168749 25356.890015082365 0.09999997992833828 1.000000087170128 34.96389289471314 SGAQASS(ph)TPLSPTR ddPTM_KYSE-520_SHP099_60min_R1 1 SGAQASSTPLSPTR 14 0 P02545-3;P02545;P02545-2;P02545-6;Q3BDU5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQAS(0.08)S(0.634)T(0.286)PLSPTR 219.59 5.9868e-14 338850000.0 485700.0 613400.0 392360.0 386650.0 348760.0 576700.0 401550.0 559380.0 641610.0 615660.0 True False 458757.25278105476 583931.3432678292 417652.1533981966 423397.0997494388 376205.4278270445 573100.6013839962 442142.59275034256 557439.6413402729 525109.7976718817 610205.7313762315 0.7518075121097167 0.9569417546289769 0.6844448223326943 0.6938595919027626 0.6165222784429886 0.9391924262845744 0.724579547545634 0.9135273772061231 0.8605455023956787 1.0 19.218936204974874 -7.727289053178822 0.8392791113963954 0.9918588934070617 0.7605515617009683 0.33408493520258165 0.1047750761537759 0.698888422653345 1.0552599545786825 0.10136523318251654 0.03854304861366693 1.8737469840370356e-08 7.727289053178822 -0.2313073317060934 SGAQASST(ph)PLS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 SGAQASSTPLSPTR 14 0 P02545-3;P02545;P02545-2;P02545-6;Q3BDU5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 2 SGAQAS(0.001)S(0.022)T(0.977)PLS(0.99)PT(0.01)R;SGAQAS(0.009)S(0.396)T(0.594)PLS(1)PTR 172.56 1.1284000000000001e-07 2967900000.0 3326780.0 2941250.0 2580970.0 2422300.0 2453470.0 2390910.0 2306730.0 2500530.0 3275290.0 2558640.0 True False 3142236.8816284873 2799947.93509374 2747343.455898009 2652514.6637089523 2646544.1306652683 2375987.4438269674 2539916.779915323 2491856.2450580895 2680579.899341869 2535972.440191796 1.2390658635828231 1.1040924146959497 1.0833490981038527 1.0459556348760408 1.0436012981533465 0.9369137480245137 1.0015553559104249 0.9826038349492592 1.057022488438059 1.0 21.274107636325677 -2.5645788140520924 0.554217339624578 0.9960638339289629 2.718004666293222 0.83456451502412 0.032043305278579216 8.563522082153566 0.44618922213083706 0.016250816101080975 14.279354316821552 0.0027253431095145314 2.5645788140520924 1.721940832364259 SGAQASSTPLS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 10 SGAQASSTPLSPTR 14 0 P02545-3;P02545;P02545-2;P02545-6;Q3BDU5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 SGAQASSTPLS(0.998)PT(0.002)R;SGAQASS(0.001)T(0.001)PLS(0.997)PT(0.002)R;SGAQASSTPLS(1)PTR;SGAQASSTPLS(1)PTR;SGAQASSTPLS(1)PTR;SGAQASSTPLS(0.992)PT(0.008)R;SGAQASSTPLS(0.999)PT(0.001)R;SGAQAS(0.001)S(0.006)T(0.002)PLS(0.978)PT(0.014)R;SGAQASSTPLS(0.999)PT(0.001)R;SGAQASSTPLS(1)PTR 237.99 2.2781e-18 147511500000.0 16696580.0 20835320.0 15170400.0 12661220.0 12911350.0 19007640.0 14232450.0 17630990.0 20676420.0 20241920.0 True False 15770387.423592957 19834359.95274709 16148308.25749821 13864538.5420654 13927399.789467571 18889006.268233962 15671204.94132639 17569832.210793983 16922103.338131946 20062592.336775452 0.7860593067370097 0.9886239833717798 0.8048963955618926 0.691064161068119 0.6941974175459942 0.9415037673675767 0.7811156543614012 0.8757508459456583 0.8434654432524715 1.0 24.258004696371785 -8.560860107905436 0.7263072787355974 1.0023418896516683 0.8129142142333253 0.2734167080921417 0.08953321158456845 2.804554930016867 2.3439815433824966 0.11033661787555084 0.03472547586412153 2.748779429344645e-09 8.560860107905436 -0.18942767541834293 SGAVQGAGSLGPGS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 8 SGAVQGAGSLGPGSPVR 17 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 SGAVQGAGSLGPGS(1)PVR;SGAVQGAGSLGPGS(1)PVR;SGAVQGAGSLGPGS(1)PVR;SGAVQGAGSLGPGS(1)PVR;SGAVQGAGSLGPGS(1)PVR;SGAVQGAGSLGPGS(1)PVR;SGAVQGAGSLGPGS(1)PVR;SGAVQGAGSLGPGS(1)PVR 300.98 4.4471e-38 6381340000.0 4863060.0 5341920.0 3713870.0 2909920.0 3438120.0 4395430.0 3028970.0 3301700.0 4410490.0 4143320.0 True False 4593296.367530236 5085286.144814605 3953272.0026020985 3186477.9219006514 3708680.4837731407 4367996.490968028 3335167.847498461 3290247.17332257 3609656.1954050874 4106613.4082541824 1.1185119978174312 1.2383162570387845 0.9626598877450038 0.7759381283604433 0.9030994922285095 1.0636493033866963 0.8121455603283385 0.8012069426134103 0.8789861222752976 1.0 21.969517709422753 -4.887556070114088 4.820805583075135 0.8857434403574803 1.1757657369408605 0.6218067885565699 0.08815503912214424 0.12666045791585934 4.759625493666421 0.023877765017084055 0.05243347780774453 1.295519427117687e-05 4.887556070114088 0.2900222965833802 SGCS(ph)DLEEAVDSGADKK ddPTM_KYSE-520_SHP099_60min_R1 2 SGCSDLEEAVDSGADKK 17 1 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 S(0.002)GCS(0.998)DLEEAVDSGADKK;S(0.083)GCS(0.917)DLEEAVDSGADKK 140.17 7.761900000000001e-06 1420890000.0 818850.0 785410.0 755190.0 732830.0 799240.0 849610.0 744510.0 759180.0 1020770.0 783590.0 True False 773426.7581629944 747677.7246755547 803870.755746723 802477.9428666269 862135.6409464597 844307.2688431724 819772.3365173901 756546.5817739445 835423.899517662 776648.0022237943 0.9958523757846843 0.9626983170428709 1.0350515979503985 1.0332582335483682 1.1100725663078854 1.087117029111834 1.0555262283172258 0.974117720779178 1.0756789396555109 1.0 19.56690135298121 -4.883135530977931 4.360163628726382 1.0503514343269567 0.9795876031072548 0.3279438594635393 0.03852176049648088 0.2402653419401904 7.90054204061808 0.010715425035108674 0.024033010079762135 1.3087734282327936e-05 4.883135530977931 -0.07076383121970187 SGCSEAQPPES(ph)PETR ddPTM_KYSE-520_SHP099_60min_R1 5 SGCSEAQPPESPETR 15 0 A0A494BZT8;Q9Y6A5;H0Y8F2;A0A494C117 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 SGCSEAQPPES(0.998)PET(0.002)R;SGCSEAQPPES(0.992)PET(0.008)R;SGCSEAQPPES(1)PETR;SGCSEAQPPES(0.997)PET(0.003)R;SGCSEAQPPES(1)PETR 363.39 1.5575999999999996e-67 3342100000.0 1840100.0 1973260.0 1648610.0 1398830.0 1465210.0 1942800.0 1537030.0 1795700.0 2155380.0 1950610.0 True False 1738025.9848515932 1878461.6276763557 1754882.038469264 1531774.3826264236 1580513.6910954933 1930674.2645549332 1692407.9923672234 1789471.13581953 1764017.3247081875 1933329.1129516144 0.8989809201177072 0.971620204285088 0.9076995875731084 0.7922988240154637 0.817508866187052 0.9986267995558045 0.8753853552556415 0.9255905390508209 0.9124247459425372 1.0 20.882655819499906 -6.259632559615532 24.999804103299784 0.9335661361979801 0.8797746596197591 0.23045130505572764 0.05801315449461426 332.4078764716416 4599311.663254298 0.021310332415110565 0.020268991546350455 5.500060166638633e-07 6.259632559615532 -0.05379147657822103 SGDEEFKGEDELCDS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 1 SGDEEFKGEDELCDSGR 17 1 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 1 S(0.138)GDEEFKGEDELCDS(0.862)GR 103.6 0.00099905 1380100000.0 504570.0 438520.0 427080.0 454310.0 439590.0 479460.0 456520.0 480590.0 505910.0 486310.0 True False 476580.4962646421 417452.8409680608 454610.26015216036 497487.4858067177 474183.2320750389 476467.5122933432 502669.4968058436 478922.9454605489 414049.4969532604 482001.67174345546 0.9887527869785091 0.8660817284265547 0.9431715423471101 1.0321281335129986 0.9837792270716896 0.9885183812120515 1.0428791563888777 0.9936126232264497 0.8590208732172977 1.0 18.87867862465099 -5.013306270758228 23.940075799391675 0.987842477558793 0.9217196043801836 0.16905237052249678 0.054196262489402305 531.5212640313623 956299.1637914287 0.014380321667692176 0.026480521814777582 9.69825790835267e-06 5.013306270758228 -0.06612287317860932 SGEISLPIKEEPS(ph)PISK ddPTM_KYSE-520_SHP099_60min_R1 7 SGEISLPIKEEPSPISK 17 1 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2A0 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2 1 SGEISLPIKEEPS(0.965)PIS(0.035)K;SGEISLPIKEEPS(1)PISK;SGEISLPIKEEPS(1)PISK;SGEISLPIKEEPS(0.997)PIS(0.003)K;SGEISLPIKEEPS(0.999)PIS(0.001)K;SGEISLPIKEEPS(0.999)PIS(0.001)K;SGEISLPIKEEPS(0.997)PIS(0.003)K 224.57 1.5152e-18 3234920000.0 3384580.0 3618940.0 3122330.0 2420250.0 2701210.0 3696960.0 3384760.0 4205140.0 5294670.0 4538800.0 True False 3196830.600407045 3445080.6902603162 3323600.387704633 2650269.832325304 2913779.8592174924 3673885.9013223145 3726924.572874241 4190553.3508270523 4333291.395769051 4498589.763132964 0.7106295014063847 0.7658134819257335 0.7388093964340438 0.58913347779451 0.6477096184890265 0.8166750236775759 0.828465089974928 0.9315260051426905 0.9632555142683662 1.0 22.101041379522133 -6.956273580949211 1.2769450124788326 0.9797951098136912 0.6947205044668755 0.8340125139638331 0.052427051975341074 0.203594644353144 0.6379876058388245 0.04252891175422347 0.020563375840685873 1.1059268931355906e-07 6.956273580949211 -0.2850746053468157 SGELTALEFSAS(ph)PGLR ddPTM_KYSE-520_SHP099_60min_R1 7 SGELTALEFSASPGLR 16 0 A0A2R8YFR7;A0A2R8YF49;H0Y895;Q12774-2;Q12774 A0A2R8YFR7;Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 SGELTALEFS(0.023)AS(0.977)PGLR;SGELTALEFSAS(1)PGLR;SGELTALEFSAS(1)PGLR;SGELTALEFSAS(1)PGLR;SGELTALEFSAS(1)PGLR;SGELTALEFS(0.002)AS(0.998)PGLR;SGELTALEFS(0.001)AS(0.999)PGLR 271.82 1.3347e-29 1592602000.0 1451197.0 1572433.0 1204634.0 1097676.0 1130586.0 1434879.0 1054519.0 1332192.0 1616170.0 1292717.0 True False 1370696.2095205018 1496890.9584099469 1282286.635122547 1201998.7970116762 1219556.6860456115 1425923.3879196614 1161120.0716336651 1327570.93688795 1322714.2683302395 1281264.5330986078 1.0697995410874386 1.1682918864458602 1.0007977291164591 0.9381347613710688 0.951838324203229 1.1129031914051433 0.9062297766298225 1.0361411734993982 1.0323506459133693 1.0 20.289136938204017 -4.778382019199129 24.238265746149594 0.9957297448715392 1.1190456719012976 0.4047252281317455 0.05903555440985722 136.461612300631 195223.69858885478 0.015134591439878664 0.03165112615708328 1.6657812938580456e-05 4.778382019199129 0.12331592702975835 SGELTALEFSAS(ph)PGLRR ddPTM_KYSE-520_SHP099_60min_R1 3 SGELTALEFSASPGLRR 17 1 A0A2R8YFR7;A0A2R8YF49;H0Y895;Q12774-2;Q12774 A0A2R8YFR7;Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 SGELTALEFS(0.02)AS(0.98)PGLRR;SGELTALEFSAS(1)PGLRR;SGELTALEFS(0.114)AS(0.886)PGLRR 209.43 4.4662e-18 495370000.0 450063.0 398760.0 456189.0 387792.0 343474.0 387439.0 311045.0 383843.0 535274.0 380208.0 True False 425097.10821165243 379602.9710490377 485595.6728682075 424647.63508608396 370503.4497002705 385020.8494877999 342488.4641066627 382511.5382226296 438081.7347594622 376839.65291734785 1.128058326454538 1.007332875164005 1.2886002550658147 1.126865582744876 0.9831859434960601 1.0217100204479979 0.9088440174892652 1.0150511902380022 1.1625149619155035 1.0 18.523591254826215 -5.718879537165982 7.476784283945494 1.0110169703101297 1.1399015249423774 0.3256851205489071 0.08624262299360158 0.26561984224517626 38.1606296538973 0.02624430182568448 0.033623688409011476 1.9103830793584767e-06 5.718879537165982 0.12888455463224768 SGEQAEGS(ph)PGGPGDSQGR ddPTM_KYSE-520_SHP099_60min_R1 4 SGEQAEGSPGGPGDSQGR 18 0 P38936 P38936 CDKN1A Cyclin-dependent kinase inhibitor 1 1 SGEQAEGS(1)PGGPGDSQGR;SGEQAEGS(1)PGGPGDSQGR;SGEQAEGS(1)PGGPGDSQGR;SGEQAEGS(1)PGGPGDSQGR 306.49 1.8332999999999999e-47 1643960000.0 1149810.0 1054080.0 937760.0 795150.0 936350.0 884530.0 893040.0 975160.0 1309050.0 1051220.0 True False 1086027.7472105923 1003440.4145936632 998209.5100690519 870720.816929436 1010035.4178972744 879009.320170257 983317.1984304958 971777.3975640541 1071359.5184650754 1041907.0086367843 1.0423461385786577 0.9630805880714343 0.9580600781014943 0.83569916481191 0.9694103307921786 0.8436542924500909 0.9437667568020811 0.9326911034368732 1.028267887233839 1.0 19.99079509054399 -10.320219090638373 4.8199371172547485 1.0000311628825682 0.941096803979443 0.05526026619532609 0.06332804322723366 2.1234817565543142e-05 2.9949843297367034e-06 0.061398027504545205 0.014883336703158147 4.783886963785937e-11 10.320219090638373 -0.05893435890312526 SGETDPGRKS(ph)PSRPILDGK ddPTM_KYSE-520_SHP099_60min_R1 2 SGETDPGRKSPSRPILDGK 19 3 O60890 O60890 OPHN1 Oligophrenin-1 1 SGET(0.041)DPGRKS(0.833)PS(0.126)RPILDGK;S(0.013)GET(0.011)DPGRKS(0.963)PS(0.013)RPILDGK 89.51100000000001 0.0014345999999999999 2085430000.0 1624210.0 1639990.0 1648900.0 1370400.0 1325420.0 1170390.0 1068750.0 1097130.0 2059560.0 1118000.0 True False 1534111.8335176362 1561202.4187248247 1755190.7323332806 1500642.4039742155 1429723.0133917942 1163085.161875873 1176789.6799948418 1093324.3121020682 1685595.8212825574 1108095.3897908372 1.3844582764731233 1.4089061583583662 1.5839707921396446 1.354253810457126 1.2902526502358853 1.0496254858486649 1.0619931197592756 0.9866698500644813 1.521164907653599 1.0 20.07965064967754 -5.897267941915384 2.306699460903333 1.1208872696009327 1.4505701358708192 0.4767951094079441 0.15279700448295358 0.2573794517259486 2.790158809016591 0.0520234176012183 0.060760001669833336 1.2668700177630192e-06 5.897267941915384 0.3296828662698865 SGEVDATS(ph)DQEESVAWALAPAVPQS(ph)PLKNELR ddPTM_KYSE-520_SHP099_60min_R1 1 SGEVDATSDQEESVAWALAPAVPQSPLKNELR 32 1 Q8NCD3;H7C3V8 Q8NCD3 HJURP Holliday junction recognition protein 2 SGEVDAT(0.15)S(0.846)DQEES(0.005)VAWALAPAVPQS(1)PLKNELR 132.7 2.8706e-05 34753000.0 75142.0 57939.0 60936.0 55465.0 65822.0 63109.0 53378.0 60466.0 77398.0 57338.0 True False 70973.72346813668 55155.52347178798 64864.032061047255 60736.37692383968 71001.81692405017 62715.113321905075 58773.96915907802 60256.25755887052 63344.47424480333 56830.029928289005 1.2488771087696928 0.9705348306412296 1.1413689583288265 1.0687373735414163 1.2493714505102997 1.1035558735591406 1.034206197555095 1.0602890344225562 1.1146303164846927 1.0 15.794365854702598 -8.263178500292852 0.4471555744146352 0.9961001964057777 1.1238058091693468 0.16592648344610006 0.0817122342848321 3.116197023935605 1.388524321943922 0.12760662568620082 0.05264796697015134 5.455335940907539e-09 8.263178500292852 0.12770561276356907 SGEVDATS(ph)DQEESVAWALAPAVPQSPLK ddPTM_KYSE-520_SHP099_60min_R1 2 SGEVDATSDQEESVAWALAPAVPQSPLK 28 0 Q8NCD3;H7C3V8 Q8NCD3 HJURP Holliday junction recognition protein 1 S(0.008)GEVDAT(0.142)S(0.803)DQEES(0.046)VAWALAPAVPQSPLK;S(0.02)GEVDAT(0.105)S(0.85)DQEES(0.025)VAWALAPAVPQSPLK 104.87 0.0010444 192241000.0 258690.0 283870.0 225790.0 183874.0 223293.0 278970.0 218960.0 270840.0 322960.0 313970.0 True False 244339.95001427026 270232.4591024432 240344.7846767732 201349.32967626624 240864.88873662232 277228.84475133306 241094.61364366833 269900.5192545311 264318.60515906976 311188.47006496356 0.7851831719962566 0.8683884047697191 0.7723447614450463 0.6470333866618923 0.7740161089076966 0.8908711967813553 0.7747543268339522 0.8673217204936505 0.849384313962181 1.0 18.247429082035165 -8.24851584415012 0.5610494813903524 1.004340147624382 0.7769456242337163 0.523932840725883 0.0618456909038842 1.0788886428150235 0.730158834238652 0.07967109211731101 0.03182252060907516 5.64266355120099e-09 8.24851584415012 -0.2273945233906658 SGFEPASLKEEVGEEAIVELVENGK ddPTM_KYSE-520_SHP099_60min_R1 2 SGFEPASLKEEVGEEAIVELVENGK 25 1 P35579;Q5BKV1;B1AH99 P35579 MYH9 Myosin-9 0 ; 234.39 1.8235e-28 144609000.0 252920.0 155743.0 115560.0 236220.0 213017.0 135306.0 151485.0 188838.0 166709.0 119720.0 False True 238890.02341647996 148260.8725049912 123009.18250253746 258670.27777786736 229780.22599906416 134461.5050647877 166798.58215112853 188182.96505312045 136438.84799189802 118659.37394075056 2.0132418997572277 1.249466161679071 1.036657942961665 2.179939681015236 1.9364692258851701 1.1331722104983253 1.4056924169717515 1.5859089661730785 1.1498362367900674 1.0 16.856466550557727 -7.8560146788478935 0.697816116101069 0.9934364808098256 1.6014015076132444 0.2307014062267435 0.3624393450992 1.204949186701794 1.360526988990948 0.37493972389721125 0.15494635499108791 1.3931097160214266e-08 7.8560146788478935 0.6079650268034188 SGFEPASLKEEVGEEAIVELVENGKK ddPTM_KYSE-520_SHP099_60min_R1 4 SGFEPASLKEEVGEEAIVELVENGKK 26 2 P35579;Q5BKV1;B1AH99 P35579 MYH9 Myosin-9 0 ;;; 266.86 2.2585e-38 1117316000.0 1335632.0 894464.0 691064.0 1049553.0 1136115.0 687121.0 739690.0 916989.0 912877.0 579025.0 False True 1261541.8304436177 851492.6068221632 735611.0911814953 1149302.201560385 1225520.786889905 682832.422964406 814465.0838787222 913808.1791858409 747121.5485564651 573895.288974633 2.1982090717238485 1.4837072601580468 1.2817862514532863 2.0026339711096424 2.135443190480825 1.1898205754300732 1.4191876105724972 1.5922907832516335 1.3018429718970719 1.0 19.130428006010785 -7.840928600911443 0.33806464416266524 0.9323685687173305 1.8219752471174948 0.36963010760246084 0.31315999309040804 1.9230997943535515 0.6796290309124906 0.630813243173152 0.4070385751602167 1.4423524583506683e-08 7.840928600911443 0.8896066784001643 SGFGEISS(ph)PVIR ddPTM_KYSE-520_SHP099_60min_R1 7 SGFGEISSPVIR 12 0 G3V1T4;P57740 G3V1T4 NUP107 Nuclear pore complex protein Nup107 1 SGFGEIS(0.006)S(0.994)PVIR;SGFGEIS(0.005)S(0.995)PVIR;SGFGEIS(0.005)S(0.995)PVIR;SGFGEIS(0.005)S(0.995)PVIR;SGFGEIS(0.062)S(0.938)PVIR;SGFGEISS(1)PVIR;SGFGEIS(0.007)S(0.993)PVIR 269.14 9.3686e-22 6942680000.0 6953680.0 6606410.0 5764140.0 4729330.0 5170360.0 5826240.0 5139150.0 5483180.0 6940730.0 5874940.0 True False 6567945.508582592 6289028.1471764175 6135705.687350084 5178804.101275092 5577237.91667577 5789876.275026006 5658665.43527063 5464160.12836383 5680468.393564871 5822892.60223415 1.1279523695942077 1.080052231216392 1.0537212527320035 0.889386848606493 0.9578122588996186 0.9943299096405321 0.9717962912624373 0.9383927373600055 0.975540643044896 1.0 22.473304579192035 -5.049137870382847 4.658578590878828 0.9601538129185286 1.097612247522928 0.7772595020342531 0.031621051800069654 0.09125822701618169 4.335779649096255 0.008803515620187281 0.016542700623002775 8.930219415122884e-06 5.049137870382847 0.13745843460439933 SGGGENEERYS(ph)PTDNNANIFNFFK ddPTM_KYSE-520_SHP099_60min_R1 4 SGGGENEERYSPTDNNANIFNFFK 24 1 J3KR82;O00444-3;O00444-2;O00444 J3KR82 PLK4 Serine/threonine-protein kinase PLK;Serine/threonine-protein kinase PLK4 1 SGGGENEERY(0.001)S(0.861)PT(0.138)DNNANIFNFFK;SGGGENEERYS(0.834)PT(0.166)DNNANIFNFFK;SGGGENEERYS(0.981)PT(0.019)DNNANIFNFFK;SGGGENEERYS(0.793)PT(0.207)DNNANIFNFFK 287.66 1.5785999999999998e-48 928680000.0 401535.0 434370.0 347177.0 359333.0 368069.0 397973.0 378988.0 402596.0 498744.0 387901.0 True False 379261.05310982245 413502.21319733764 369556.58492284047 393483.90028259385 397033.93627386325 395489.1028864113 417299.8056064418 401199.4884426124 408184.66191310075 384464.4989224115 0.9864657313557599 1.0755276868379626 0.9612242117507458 1.0234596468216497 1.0326933628116035 1.0286752196754183 1.085405302117782 1.0435280489280705 1.0616966275356314 1.0 18.55249086171836 -6.11536844255195 1.8540107539465511 1.0502935578226709 1.0130677785370257 0.16104226055493842 0.03415774333290152 0.587163883222628 4.007540290496698 0.012850424282210643 0.01303264959572327 7.667107587129068e-07 6.11536844255195 -0.03722577928564519 SGGGGGGGGSSWGGR ddPTM_KYSE-520_SHP099_60min_R1 2 SGGGGGGGGSSWGGR 15 0 Q13151 Q13151 HNRNPA0 Heterogeneous nuclear ribonucleoprotein A0 0 ; 148.18 0.0011279999999999999 0.0 115415.0 136408.0 88874.0 85630.0 108041.0 132013.0 106675.0 131028.0 122985.0 107662.0 False True 109012.69987590153 129854.75492741776 94602.96024342765 93768.24945440167 116543.21203079991 131189.05789926395 117458.7500476723 130573.49445016496 100654.02419955489 106708.19843976849 1.0215962922233555 1.2169145091575542 0.8865575618992982 0.8787351939722722 1.0921673660958937 1.2294187308701843 1.100747194358941 1.223650069622975 0.9432642071674475 1.0 16.703311497778305 -5.979339839595308 24.887421603978446 1.118734692855383 1.0053615511978669 0.12649986582895167 0.11984840605829349 428.9929819601572 516765.98408150306 0.037930626707708914 0.04300565137953824 1.048721472885583e-06 5.979339839595308 -0.11337314165751611 SGGGLHSVAEGVRLS(ph)PEPGR ddPTM_KYSE-520_SHP099_60min_R1 4 SGGGLHSVAEGVRLSPEPGR 20 1 Q9NWK9-2;Q9NWK9 Q9NWK9-2 ZNHIT6 Box C/D snoRNA protein 1 1 SGGGLHSVAEGVRLS(1)PEPGR;SGGGLHSVAEGVRLS(1)PEPGR;SGGGLHSVAEGVRLS(1)PEPGR;SGGGLHSVAEGVRLS(1)PEPGR 189.51 4.0069000000000003e-13 3435170000.0 1019170.0 1454760.0 1465730.0 2314040.0 1011590.0 947210.0 844010.0 813790.0 1335100.0 897540.0 True False 962634.6084349756 1384871.1459607221 1560213.3010509205 2533965.6658585044 1091196.3778402335 941298.1110402896 929330.76754381 810967.1524300135 1092679.4951321355 889588.4938755541 1.082112251970786 1.5567547866176132 1.7538595786617506 2.848469470214376 1.2266304986549013 1.0581275696805148 1.044674896249069 0.911620550415371 1.2282976934332877 1.0 19.762778602498198 -5.978572386825272 24.982382446628762 1.0538449871253537 1.8193315354361521 0.4314014045366883 0.4158742042661883 234.85046031824382 273810.03526329383 0.13511069510556115 0.153188867038443 1.0505763335441384e-06 5.978572386825272 0.7654865483107984 SGGIVIS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 12 SGGIVISPFR 10 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 SGGIVIS(1)PFR;SGGIVIS(1)PFR;SGGIVIS(1)PFR;SGGIVIS(1)PFR;SGGIVIS(1)PFR;SGGIVIS(1)PFR;SGGIVIS(1)PFR;SGGIVIS(1)PFR;SGGIVIS(1)PFR;SGGIVIS(1)PFR;SGGIVIS(1)PFR;SGGIVIS(1)PFR 179.19 1.7174000000000002e-05 20480000000.0 8208530.0 7436530.0 6487240.0 6432050.0 6471690.0 7673450.0 6485160.0 7657780.0 8211380.0 7555530.0 True False 7753186.477601138 7079267.9363409 6905417.870350989 7043350.098133646 6980975.184120904 7625557.152228255 7140743.2618623115 7631216.948519279 6720400.384044726 7488593.8823134 1.0353327473015534 0.9453400795389308 0.9221247645249184 0.940543740096344 0.9322144175301865 1.0182895844089417 0.9535492742806305 1.0190453733300624 0.8974181922078861 1.0 22.8362634215924 -6.219555328031921 24.999731446644514 0.9773439579612739 0.951926440840902 0.05948323840001868 0.04391973210459966 1427.0018465813705 851748.2666252161 0.014104389098724574 0.014104349111271492 6.031768598066694e-07 6.219555328031921 -0.02541751712037188 SGGIVIS(ph)PFRLEELTNR ddPTM_KYSE-520_SHP099_60min_R1 6 SGGIVISPFRLEELTNR 17 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 S(0.011)GGIVIS(0.989)PFRLEELTNR;S(0.02)GGIVIS(0.98)PFRLEELTNR;SGGIVIS(1)PFRLEELTNR;SGGIVIS(1)PFRLEELTNR;SGGIVIS(1)PFRLEELTNR;SGGIVIS(1)PFRLEELTNR 198.14 9.691e-13 2564050000.0 1976770.0 2293450.0 2079800.0 1428604.0 1603759.0 2040190.0 1366465.0 1669034.0 2713500.0 1822770.0 True False 1867114.6275066999 2183269.2194613675 2213867.2357976595 1564378.0946345439 1729965.709159519 2027456.4174399476 1504600.6176132408 1663244.5106094645 2220796.801768441 1806621.6758936013 1.0334840173901807 1.208481691874679 1.2254182850444457 0.8659134978333316 0.9575694414846616 1.1222362957851237 0.8328255094520699 0.9206379690904468 1.2292539336825892 1.0 20.78486299281682 -5.250444153989767 24.82027731614993 0.9841074628336437 1.16106337025375 0.28606280080367974 0.1198683402904719 823.9583677325265 1859973.9245509638 0.03254669318317224 0.055672865854420585 5.617665113741189e-06 5.250444153989767 0.17695590742010636 SGGLQT(ph)PECLS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 SGGLQTPECLSR 12 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 2 SGGLQT(1)PECLS(1)R;SGGLQT(1)PECLS(1)R;SGGLQT(1)PECLS(1)R;SGGLQT(1)PECLS(1)R 152.94 8.285600000000001e-05 978330000.0 3267320.0 2739980.0 2560880.0 2407870.0 2652290.0 2304590.0 2244120.0 2400380.0 2964260.0 2449460.0 True False 3086075.246359057 2608347.2480061753 2725958.422352873 2636713.240847484 2861010.133534216 2290206.1989657474 2470977.550100607 2392053.642032903 2426025.106913625 2427759.6900510443 1.2711617459527764 1.0743844453366527 1.1228287682359364 1.0860684653644803 1.1784568898061167 0.9433413893273741 1.0178015395126088 0.9852925937585731 0.999285521073388 1.0 21.21119419391213 -6.260003927293128 24.999162757699526 0.9900160772055432 1.1378879257850794 0.6760401972105524 0.05432398845597907 81.35279835670474 1416807.9234802644 0.017834353094576472 0.016932628825113993 5.495359044223012e-07 6.260003927293128 0.14787184857953617 SGGLQTPECLS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 7 SGGLQTPECLSR 12 0 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 SGGLQT(0.001)PECLS(0.999)R;SGGLQTPECLS(1)R;SGGLQTPECLS(1)R;SGGLQTPECLS(1)R;SGGLQTPECLS(1)R;SGGLQTPECLS(1)R;SGGLQTPECLS(1)R 167.92 2.5707e-06 8499900000.0 9832230.0 10362300.0 8985240.0 8683150.0 9638830.0 9861100.0 8860870.0 9953530.0 11685000.0 9795010.0 True False 9286816.60183543 9864479.55387059 9564442.947292306 9508393.965315757 10397351.083559334 9799553.217110675 9756613.213357551 9919003.52760136 9563298.554879038 9708233.831802465 0.9565917717611471 1.0160941449057699 0.9851887699656424 0.9794154250969865 1.070982762024071 1.009406385022275 1.0049833350116273 1.0217104057700435 0.9850708914273733 1.0 23.21077742687782 -2.756167704498165 1.0284261193622146 1.0111771578458635 1.2224874294012605e-13 0.25426112262047706 0.02524465106032482 51.68015475621942 3.368928927692108 0.00799807785809519 108.86598872723773 0.0017532033648332529 2.756167704498165 -1.0111771578457411 SGIETFS(ph)PPPPPPK ddPTM_KYSE-520_SHP099_60min_R1 1 SGIETFSPPPPPPK 14 0 Q86YV5 Q86YV5 SGK223 Tyrosine-protein kinase SgK223 1 SGIET(0.002)FS(0.998)PPPPPPK 119.69 0.00010739 446230000.0 794200.0 835440.0 600630.0 574850.0 590190.0 836580.0 663050.0 845400.0 982830.0 907500.0 True False 750144.1428015516 795304.2083789941 639347.5708419781 629483.571165045 636634.5952782532 831358.5939064058 730077.5647444014 842467.5047178431 804372.8471280932 899460.256024317 0.8339936509448966 0.8842016120804487 0.7108124751036173 0.6998458986363782 0.7077962489329175 0.9242860797219371 0.811684073703712 0.9366367208281262 0.8942839238761728 1.0 19.778700009717465 -7.193898627565888 0.8930717490037824 0.9726751436504929 0.7749574265371617 0.5002707050411873 0.07125144159400616 0.5441226433644641 0.7860573812155344 0.06828008802931522 0.02983389633610878 6.398841789570025e-08 7.193898627565888 -0.1977177171133312 SGIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SGISPK 6 0 Q86U86-8;Q86U86;E7EVG2;Q86U86-6;Q86U86-5;Q86U86-4;Q86U86-7;Q86U86-3;Q86U86-9;Q86U86-2;H0Y5B5 Q86U86-8 PBRM1 Protein polybromo-1 1 S(0.007)GIS(0.993)PK 57.59 0.067053 614750000.0 1219700.0 893840.0 869350.0 1138200.0 1178000.0 1158700.0 1485900.0 715940.0 1144000.0 1291000.0 True False 1152040.8095883313 850898.584718807 925389.6920091803 1246374.1857876913 1270701.8980968532 1151468.1235020591 1636109.2729865112 713456.5712416514 936278.437893163 1279562.7443828 0.9003394438027505 0.6649916844282926 0.7232077489529786 0.9740625782199392 0.993075098251457 0.8998918799073603 1.2786471630007423 0.557578418388376 0.7317174886525623 1.0 20.28721946214154 -3.9093631789284005 20.147304357555125 0.866509148895108 3.171662643158109 0.002049313496995997 0.19777012127406526 7065.765457273148 1792439.2981869043 0.04954303925774771 105141.76068140128 0.00012320740798793848 3.9093631789284005 2.305153494263001 SGKNS(ph)QEDS(ph)EDS(ph)EDKDVK ddPTM_KYSE-520_SHP099_60min_R1 9 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 S(0.007)GKNS(0.993)QEDS(1)EDS(1)EDKDVK;S(0.001)GKNS(0.999)QEDS(1)EDS(1)EDKDVK;S(0.004)GKNS(0.996)QEDS(1)EDS(1)EDKDVK;S(0.04)GKNS(0.968)QEDS(0.992)EDS(1)EDKDVK;S(0.1)GKNS(0.9)QEDS(1)EDS(1)EDKDVK;S(0.102)GKNS(0.9)QEDS(0.998)EDS(1)EDKDVK;S(0.019)GKNS(0.981)QEDS(1)EDS(1)EDKDVK;S(0.418)GKNS(0.583)QEDS(1)EDS(1)EDKDVK;S(0.093)GKNS(0.918)QEDS(0.99)EDS(0.999)EDKDVK 127.74 7.814500000000001e-06 39157010000.0 26768600.0 24268200.0 22695720.0 22421160.0 23158140.0 23044700.0 23224040.0 24586480.0 29298100.0 21993810.0 True False 25283692.39611888 23102319.24468914 24158722.425635945 24552060.305232435 24980553.866207734 22900869.479302596 25571752.607988216 24501195.23940755 23978303.584997986 21798961.95432528 1.1598576321705159 1.0597898786692113 1.1082510477450715 1.1262949289363247 1.1459515328550391 1.0505486237044732 1.1730720325843016 1.1239615579285005 1.0999745600381805 1.0 24.37775610109432 -8.187898973000717 4.090275277067433 1.0000038102783306 1.116752303153126 0.47604032114611927 0.03705267212968179 1.4954629326578566 31.654973698260864 0.03444272204212557 0.009034073159285118 6.487853385576928e-09 8.187898973000717 0.11674849287479527 SGKNS(ph)QEDS(ph)EDSEDKDVK ddPTM_KYSE-520_SHP099_60min_R1 3 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 S(0.024)GKNS(0.976)QEDS(0.99)EDS(0.01)EDKDVK;S(0.04)GKNS(0.96)QEDS(1)EDSEDKDVK;S(0.417)GKNS(0.583)QEDS(0.983)EDS(0.017)EDKDVK 158.94 2.4869e-08 4935750000.0 12758910.0 11166030.0 10484950.0 10965160.0 11140610.0 11091060.0 11180460.0 11603870.0 14365640.0 10220960.0 True False 12051147.828043481 10629597.158247277 11160826.653513147 12007285.509604437 12017312.625599992 11021836.580520174 12310690.00757439 11563618.883333625 11757201.904314283 10130410.246186554 1.1896011647287394 1.049276080625524 1.1017151706876311 1.18527139748604 1.18626120103317 1.0879950873331299 1.2152212702549308 1.14147587336718 1.160584973223578 1.0 23.27218926363732 -3.921578432798766 19.89319707775484 1.1335358787320597 3.2255314750119695 0.07062134717400592 0.06398577135494488 1079.2413470095926 282951.894014135 0.014938881478493935 3374.8812925945817 0.00011979027645786745 3.921578432798766 2.0919955962799097 SGKNS(ph)QEDSEDSEDKDVK ddPTM_KYSE-520_SHP099_60min_R1 2 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 S(0.206)GKNS(0.791)QEDS(0.003)EDSEDKDVK;S(0.021)GKNS(0.915)QEDS(0.063)EDS(0.001)EDKDVK 165.47 1.7619999999999998e-08 2629400000.0 2322260.0 2008170.0 1857440.0 1808720.0 1910820.0 1692430.0 1782580.0 1868970.0 2210300.0 1530450.0 True False 2193439.608489463 1911694.4988753789 1977173.5544090783 1980620.2049885034 2061190.6629214191 1681866.9165949689 1962780.5827042868 1862486.9792908768 1808965.2371287239 1516891.4036720826 1.4460096505126183 1.2602711665763013 1.3034377738727685 1.3057099540506516 1.3588254623447005 1.108758947755597 1.2939493084032239 1.2278314550284735 1.1925476225586027 1.0 20.532686374097143 -13.999999944573931 0.07428388777171437 0.03747617436060836 1.5938672591092917 0.677413561688292 0.06827414861759175 168.917329551968 0.8954049427040508 27.06829206693534 2.973061634237183 1.0000001276232485e-14 13.999999944573931 1.5563910847486833 SGKNSQEDS(ph)EDSEDKDVK ddPTM_KYSE-520_SHP099_60min_R1 1 SGKNSQEDSEDSEDKDVK 18 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 S(0.006)GKNS(0.061)QEDS(0.837)EDS(0.096)EDKDVK 79.942 0.0049234 583190000.0 176910.0 172290.0 150660.0 158860.0 144450.0 155540.0 140460.0 157270.0 181810.0 134290.0 True False 167096.44963865814 164012.92978743764 160371.78466452294 173958.00663699926 155817.39319192743 154569.21716536657 154659.06755749742 156724.4670770938 148797.88705712926 133100.29507603907 1.2554175747183534 1.2322506850472303 1.2048942834642395 1.306969353731474 1.1706765420986505 1.1612988316597082 1.161973889457886 1.1774915073445815 1.1179380704762698 1.0 17.022154244065778 -8.680375346519252 0.2067906238016266 0.9050321614978641 1.28965088483087 0.8155393975973836 0.033863266879143844 2.973499024798676 0.2878391885569627 0.3266767713203659 0.12015410059185679 2.087491200611701e-09 8.680375346519252 0.38461872333300595 SGKPAELLK ddPTM_KYSE-520_SHP099_60min_R1 1 SGKPAELLK 9 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 91.03 0.017591 0.0 934240.0 766780.0 633760.0 529670.0 780430.0 754520.0 653920.0 832970.0 718110.0 804470.0 False True 882415.8448387316 729942.7378397551 674613.1836518523 580009.6775489078 841845.4009607186 749810.7608050178 720024.6152441887 830080.6214866588 587719.3260799475 797343.0216681894 1.1066953881311383 0.9154688985834222 0.8460764881850178 0.7274280476367875 1.055813342668281 0.9403866848126101 0.9030299327606376 1.0410583637516213 0.7370972217833295 1.0 19.60484098810693 SGKYDLDFK ddPTM_KYSE-520_SHP099_60min_R1 2 SGKYDLDFK 9 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 113.63 0.0009676 74202000000.0 93698000.0 91311000.0 58781000.0 52082000.0 89603000.0 94197000.0 71032000.0 82413000.0 82845000.0 81892000.0 False True 88500385.15766779 86924282.49939482 62570117.312925376 57031857.6209757 96654246.32866931 93609081.58239701 78212607.76551448 82127128.53833888 67802436.35249914 81166500.59101196 1.0903560522291134 1.0709379099315322 0.7708859795275458 0.7026526609586415 1.190814506291188 1.15329699938749 0.9636069954477675 1.0118352761340226 0.8353500010324124 1.0 26.274381078774454 -3.0453828834570515 16.312801762601488 0.9787003809378734 1.0834618221986958 0.0 0.15432726198909436 0.0 0.0 0.03770810101426447 0.0 0.0009007766431636283 3.0453828834570515 0.10476144126082243 SGLCS(ph)PSYVAVTPFSLR ddPTM_KYSE-520_SHP099_60min_R1 1 SGLCSPSYVAVTPFSLR 17 0 H0YBT0;A0A087WUS5;P01106;P01106-2;H0YBG3;A0A0B4J1R1 H0YBT0 MYC Myc proto-oncogene protein 1 S(0.002)GLCS(0.994)PS(0.005)YVAVTPFSLR 89.35799999999999 0.0017707 485910000.0 225250.0 294180.0 238390.0 188940.0 194300.0 229190.0 217460.0 321340.0 392340.0 282890.0 True False 212754.93347525722 280047.1512268177 253757.000837486 206896.80079311776 209590.3045842265 227759.54019628643 239442.9790050794 320225.3465413197 321100.94608654146 280383.8146850894 0.758798911820966 0.9987992764181134 0.905034411927418 0.7379056491741225 0.7475121373165781 0.8123134370366297 0.8539828851177007 1.142096404177174 1.1452192646967985 1.0 18.09704354579853 -7.232948019836313 6.980601816378639 1.1079559619312307 0.8318942326554166 0.6792585892507839 0.08338247069015686 0.11618293920388954 21.900310446995096 0.04326388383647024 0.024156805770148438 5.8486008112752765e-08 7.232948019836313 -0.27606172927581407 SGLEELVLSEMNS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 4 SGLEELVLSEMNSPSR 16 0 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328;Q4V328-3;Q4V328-2 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 SGLEELVLSEMNS(0.98)PS(0.02)R;SGLEELVLSEMNS(0.998)PS(0.002)R;SGLEELVLSEMNS(1)PSR;SGLEELVLSEMNS(0.999)PS(0.001)R 384.32 5.094699999999999e-86 1005040000.0 1175500.0 1316970.0 1068980.0 846130.0 1028180.0 1254870.0 968310.0 1240230.0 1575230.0 1303260.0 True False 1110292.671698845 1253700.78438773 1137888.1612284745 926545.9408017392 1109091.916456047 1247037.8908596071 1066196.2245949048 1235927.9316018578 1289207.940316823 1291714.1303209364 0.8595498381851595 0.9705713942110692 0.8809133031205266 0.7172995317249736 0.8586202553814941 0.9654132145707587 0.8254119077647623 0.9568122718412795 0.9980597951626567 1.0 20.300855391367104 -7.447256365754978 4.395463597010143 0.9942443030371595 0.87045631200257 0.39628647563988484 0.0671328394255696 0.2487995989025858 8.88092611565134 0.04391914600214766 0.019068025999561092 3.570620008138881e-08 7.447256365754978 -0.12378799103458948 SGLLSSFSLS(ph)MTDLSK ddPTM_KYSE-520_SHP099_60min_R1 3 SGLLSSFSLSMTDLSK 16 0 A0A1B0GTU3;Q96L93-5;Q96L93-4;Q96L93;Q96L93-6;Q96L93-2 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 SGLLSSFS(0.002)LS(0.996)MT(0.001)DLSK;SGLLSSFSLS(0.999)MT(0.001)DLSK;SGLLSSFS(0.001)LS(0.994)MT(0.006)DLSK 288.16 2.4739e-37 714022400.0 917214.0 975538.0 826016.0 690496.0 727852.0 1028140.0 690242.0 1009558.0 1109487.0 832826.0 True False 866334.310999222 928671.6901676101 879262.31303233 756120.5322348067 785129.811488617 1021722.996890832 760018.3974727474 1006056.0789306078 908032.1286912345 825447.8095688238 1.0495325094529664 1.1250519771234304 1.0651943137284676 0.9160125249224048 0.9511562116794918 1.237780250970117 0.9207346468939644 1.2188003496624766 1.1000478990495461 1.0 19.65481747545479 -6.210496551887722 24.99995629523951 1.0982274545200108 1.0237279024133 0.11538650436918174 0.10231797057561108 843.2269684368197 413809.5452096056 0.03380163855559018 0.033801557059375785 6.158904190022104e-07 6.210496551887722 -0.07449955210671089 SGLNGS(ph)ILAER ddPTM_KYSE-520_SHP099_60min_R1 2 SGLNGSILAER 11 0 Q96H22-5;Q96H22-4;Q96H22;Q96H22-3 Q96H22-5 CENPN Centromere protein N 1 S(0.009)GLNGS(0.991)ILAER;SGLNGS(1)ILAER 115.3 0.00026706 908460000.0 862070.0 847170.0 767370.0 695750.0 731390.0 836560.0 794550.0 785990.0 1014040.0 913460.0 True False 814249.2586060608 806470.6815719045 816835.8980354117 761873.8708151346 788946.2319601508 831338.718733824 874870.8680607261 783263.5841414445 829915.8978681662 905367.4550611271 0.8993577735253203 0.8907661492177831 0.902214778617442 0.8415079054986527 0.8714099756400941 0.9182334908180403 0.9663157905335332 0.8651333552613303 0.9166619511545545 1.0 19.788143921882074 -6.352617949693603 5.254917755361016 0.9277134102531579 0.880674494816519 0.3353328257256134 0.036496635498561865 0.3149148597275235 13.979719265888026 0.013076798329517454 0.011496209653110457 4.4399905963709973e-07 6.352617949693603 -0.04703891543663885 SGLS(ph)DIILGK ddPTM_KYSE-520_SHP099_60min_R1 7 SGLSDIILGK 10 0 Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;K7EJR2;M0R330;M0QX30;M0R1V5 Q9UBC2-3 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 S(0.331)GLS(0.669)DIILGK;S(0.004)GLS(0.996)DIILGK;SGLS(1)DIILGK;SGLS(1)DIILGK;S(0.005)GLS(0.995)DIILGK;S(0.001)GLS(0.999)DIILGK;S(0.001)GLS(0.999)DIILGK 127.03 0.00041084 3177246000.0 3867640.0 3685580.0 3328390.0 2799885.0 2936510.0 3534950.0 3124440.0 3322430.0 3909320.0 3473900.0 True False 3653094.2992508034 3508519.2046316396 3542943.345012294 3065985.2285838765 3167596.630543627 3512887.0658268747 3440288.8867958672 3310905.2657909906 3199486.0339375 3443123.948653307 1.0609825128949022 1.018993000819477 1.028990938998298 0.8904661215530917 0.9199775197702523 1.0202615758868785 0.9991766018593236 0.9615992090804543 0.9292392843391246 1.0 21.71528668659237 -5.042294687968874 23.36686030037731 0.9608704540736968 1.0359888469423415 0.44828224783441784 0.03881931721752422 215.1359249494626 118857.51868298148 0.011290881229796296 0.019560009144835383 9.072047428346614e-06 5.042294687968874 0.07511839286864475 SGLS(ph)LEELR ddPTM_KYSE-520_SHP099_60min_R1 5 SGLSLEELR 9 0 A0A087WWA3;Q4R9M9;O60333-2;O60333;O60333-4 A0A087WWA3 KIF1B;KIF1Bbeta Kinesin-like protein;Kinesin-like protein KIF1B 1 S(0.002)GLS(0.998)LEELR;SGLS(1)LEELR;S(0.002)GLS(0.998)LEELR;S(0.001)GLS(0.999)LEELR;S(0.011)GLS(0.989)LEELR 135.56 0.00071016 1094780000.0 2636010.0 2390640.0 2179000.0 1908470.0 2202610.0 2400720.0 2037530.0 2290080.0 2838570.0 2366830.0 True False 2489785.270544342 2275790.065976204 2319461.8265232677 2089850.4149975716 2375942.875863424 2385736.215978133 2243503.4167765053 2282136.2469886905 2323157.2425265713 2345861.727565877 1.0613520998647281 0.9701296710005234 0.9887461819542098 0.890866836028759 1.0128230696396414 1.0169977999741828 0.9563664347362957 0.9728349374439431 0.9903214734387331 1.0 21.161686548234492 SGLSSALGEMVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SGLSSALGEMVSPR 14 0 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 SGLSSALGEMVS(1)PR 77.726 0.012587000000000001 134530000.0 224370.0 203770.0 167780.0 225370.0 180730.0 167030.0 182910.0 227410.0 251230.0 191030.0 True False 211923.7488294938 193980.5833349941 178595.3672574915 246789.09704003856 194952.42278696486 165987.5038133675 201400.32782957322 226621.16778789315 205612.96499291898 189337.62281909102 1.11929021646154 1.024522123214462 0.9432640201051665 1.3034340104493731 1.0296549617781918 0.8766747006851662 1.063710026728327 1.196915670608297 1.0859593668257828 1.0 17.53060158839137 -10.063078073840407 4.841539639128311 0.9999979730623499 1.0696603177692143 0.03384127145318738 0.11422154507959942 2.579332366162095e-06 4.988712419393915e-07 0.11414341710883742 0.02768303978440499 8.648124360322743e-11 10.063078073840407 0.06966234470686439 SGLSSPIY(ph)IDLR ddPTM_KYSE-520_SHP099_60min_R1 2 SGLSSPIYIDLR 12 0 F2Z3P2;F2Z303;F8WDG4;E9PFD2;P11172 F2Z3P2 UMPS Uridine 5-monophosphate synthase;Orotate phosphoribosyltransferase;Orotidine 5-phosphate decarboxylase 1 SGLSS(0.005)PIY(0.995)IDLR;SGLSSPIY(1)IDLR 147.74 8.1998e-05 84903000.0 259320.0 320430.0 260800.0 225880.0 249700.0 311530.0 228770.0 264500.0 354440.0 275310.0 True False 244935.00265839617 305036.0618247646 277611.58529475395 247347.56728670135 269349.9694013451 309585.6257138141 251896.3041800423 263582.5112347641 290082.63070529065 272870.9675879388 0.8976220695939752 1.117876571923907 1.017373111359996 0.9064634815244242 0.9870964719416001 1.1345495215208015 0.9231334004005503 0.9659602616017356 1.063076197770307 1.0 18.05785938006014 -6.868088158264092 21.844101537788035 0.9852274997374686 1.0112229219344355 0.018042932390286093 0.07848174485100172 22.29633169463552 4484.824631400499 0.033092657235785874 0.02231108870972444 1.354914347789848e-07 6.868088158264092 0.025995422196966933 SGLTVPTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 SGLTVPTSPK 10 0 Q5VZS7;Q53EL6-2;Q53EL6 Q5VZS7 PDCD4 Programmed cell death protein 4 1 SGLTVPT(0.02)S(0.98)PK;SGLTVPT(0.028)S(0.972)PK;SGLTVPT(0.395)S(0.605)PK;SGLTVPT(0.008)S(0.992)PK 151.13 0.00014803 32282400000.0 88385000.0 77387000.0 55422000.0 46986400.0 54178000.0 72249000.0 54807000.0 68793000.0 88111000.0 62454000.0 True False 83482107.85887071 73669212.35974482 58994590.79833539 51451973.32902371 58441500.36934748 71798067.19159415 60347426.424774095 68554373.13940695 72112263.49755634 61900706.14847675 1.348645484893633 1.1901190946520028 0.9530519838793007 0.8312017185330581 0.9441168607861772 1.159890923043387 0.9749069143092339 1.107489355209786 1.1649667343791825 1.0 25.88345253166553 -4.534806055031129 3.6102216509749376 1.015804980200496 1.3294076430023414 0.5355887493799094 0.09899065034572911 0.1842695438120417 4.994807341779971 0.028238128083453225 0.10829188238808236 2.9187301543226458e-05 4.534806055031129 0.31360266280184534 SGMNS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 3 SGMNSPLR 8 0 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 S(0.076)GMNS(0.924)PLR;SGMNS(1)PLR;SGMNS(1)PLR 132.55 0.00077415 3415690000.0 5240900.0 5110300.0 4625300.0 4365000.0 4765800.0 4997900.0 4792700.0 4990000.0 6037200.0 5363400.0 True False 4950176.82952487 4864793.517283313 4923454.238741667 4779848.287614896 5140841.346307288 4966706.252223132 5277192.88824447 4972690.854674757 4940996.665427105 5315884.448662064 0.9312047463279158 0.9151428260461372 0.926177814113479 0.8991633158651368 0.967071687873345 0.9343141861319398 0.992721519665964 0.9354399823205932 0.9294778156193155 1.0 22.341878314428474 -5.769730863758792 24.99993528181176 0.9569775660688032 0.91831333797928 0.4279910711304452 0.02359872913046003 188.0722556736153 567061.5129853968 0.0070619778182958014 0.008142414511898939 1.6992963956656607e-06 5.769730863758792 -0.03866422808952319 SGMS(ph)PEQSR ddPTM_KYSE-520_SHP099_60min_R1 8 SGMSPEQSR 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SGMS(1)PEQSR;SGMS(1)PEQSR;S(0.002)GMS(0.998)PEQSR;S(0.002)GMS(0.997)PEQS(0.001)R;SGMS(1)PEQSR;S(0.003)GMS(0.997)PEQSR;S(0.002)GMS(0.998)PEQSR;SGMS(1)PEQSR 128.08 0.00069077 19539810000.0 13046030.0 11988670.0 11526860.0 10556140.0 11372960.0 10870910.0 10809760.0 11197920.0 13710500.0 11169290.0 True False 12322340.70928397 11412716.297839452 12269899.83922809 11559392.371780785 12267947.248709336 10803060.61833069 11902516.03389102 11159077.02913417 11221018.81357887 11070338.780176133 1.1130951774800082 1.0309274652259441 1.1083581164833034 1.0441769309246804 1.1081817361070994 0.9758563701479431 1.0751717964770042 1.0080158566707047 1.0136111492515987 1.0 23.40019603709897 -6.2539803221807135 24.98735231212614 1.0188220728095558 1.0776489322859502 0.47650548353368205 0.03457536227383512 555.1775834670522 1859813.376119228 0.010743485078534823 0.010560693105930115 5.572109955084586e-07 6.2539803221807135 0.05882685947639432 SGMS(ph)PPPCK ddPTM_KYSE-520_SHP099_60min_R1 5 SGMSPPPCK 9 0 Q9H6T0-2;Q9H6T0 Q9H6T0-2 ESRP2 Epithelial splicing regulatory protein 2 1 SGMS(1)PPPCK;SGMS(1)PPPCK;SGMS(1)PPPCK;SGMS(1)PPPCK;SGMS(1)PPPCK 134.57 0.00049928 2640290000.0 6034560.0 5472040.0 4447660.0 4358800.0 4935550.0 5620440.0 4861020.0 5304140.0 6226340.0 5223340.0 True False 5699810.927202881 5209154.984700503 4734363.280107617 4773059.041478991 5323949.705561911 5585360.7491636425 5352419.340583417 5285741.176335582 5095793.609258496 5177065.271297027 1.1009733562379616 1.0061984370916452 0.9144878482324991 0.9219623070897038 1.0283721426266823 1.0788662024661557 1.0338713267260888 1.0209917973491818 0.9843015960240791 1.0 22.303703076818536 -5.917477600969995 24.999987702051346 1.0286873434159705 0.9813673629268217 0.10616789876743471 0.053217558638341926 57.8591360227891 17522.749646182594 0.01783336335405719 0.020221132869075408 1.209267550122114e-06 5.917477600969995 -0.04731998048914876 SGNFGGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SGNFGGSR 8 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 1 SGNFGGS(1)R 70.363 0.042152999999999996 0.0 288210.0 218550.0 226500.0 204560.0 265620.0 234330.0 244860.0 243560.0 314110.0 264510.0 True False 272222.41676760925 208050.5299497621 241100.5524128137 224001.32089679362 286522.78282893583 232867.45954969985 269612.83840330935 242715.14720733132 257075.54206872493 262166.64718566585 1.0383564030355925 0.793581228516918 0.9196461678135084 0.8544234108397335 1.0929032579267073 0.8882421240440384 1.0284025115230242 0.925804826101472 0.9805806529106832 1.0 18.00012463215327 -5.716342952928779 24.99993896268719 0.9795132615365043 0.8950892164036325 0.21797275992084542 0.07743999222333496 193.83284333692262 107453.39514766229 0.021250365074587704 0.027433983580206125 1.9215737045545612e-06 5.716342952928779 -0.08442404513287183 SGNFGGSR ddPTM_KYSE-520_SHP099_60min_R1 3 SGNFGGSR 8 0 P22626;P22626-2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;; 125.04 0.006642 6989300000.0 3040840.0 3040680.0 2188950.0 2144220.0 3139020.0 3380660.0 2567380.0 2594940.0 2636130.0 2899250.0 False True 2872158.5434357426 2894601.168646269 2330053.219443832 2348006.0241167475 3386043.0154193407 3359560.046947843 2826915.8256141813 2585938.7588035488 2157475.243429461 2873564.900582368 0.9995105879994775 1.007320617000729 0.8108580456879935 0.8171056180568225 1.1783422795612208 1.1691262119282502 0.9837661314144209 0.8999061612561707 0.7508009451925789 1.0 21.454410202694806 -7.324750845958641 4.19521850614769 0.8631880476132999 0.9956538658707054 0.13818712395435329 0.12707798483547317 0.46507984078493914 16.440497161401822 0.081548283465343 0.0374521771923025 4.734227829519377e-08 7.324750845958641 0.13246581825740544 SGNLTEDDKHNNAK ddPTM_KYSE-520_SHP099_60min_R1 4 SGNLTEDDKHNNAK 14 1 P13797;A0A0A0MSQ0;P13797-3;P13797-2 P13797 PLS3 Plastin-3 0 ;;; 228.03 1.9816e-14 6104050000.0 3840240.0 3578510.0 2615350.0 2524680.0 3524430.0 3557720.0 2679020.0 3399770.0 3309400.0 2823900.0 False True 3627214.2318713535 3406593.0081469784 2783939.6457079574 2764624.828127278 3801782.5897364165 3535514.949810778 2949841.4863155815 3387976.9913822873 2708496.383184996 2798882.4429609547 1.295950903902238 1.2171261485863347 0.9946611558157515 0.9877602523393461 1.3583216398736946 1.2631880837662246 1.0539354711857516 1.2104749164806385 0.967706375091503 1.0 21.41641946226612 -7.7665952278973815 24.994097591539955 0.9838530731085384 1.1673082862725692 0.2857848606942246 0.11916061481413805 191.15283238808524 926603.2827537205 0.10993864494143629 0.031773336845378516 1.711609830288985e-08 7.7665952278973815 0.1834552131640308 SGNTPNS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 SGNTPNSPR 9 0 Q96EA4-2;Q96EA4-3;Q96EA4 Q96EA4-2 SPDL1 Protein Spindly 1 SGNT(0.001)PNS(0.999)PR;SGNT(0.003)PNS(0.997)PR;SGNT(0.01)PNS(0.99)PR 86.911 0.0046647 1074880000.0 770290.0 612252.0 609132.0 690364.0 647720.0 857530.0 1114890.0 684650.0 974100.0 906080.0 True False 727560.478164955 582838.4949110126 648397.6233656593 755975.9869944946 698691.8789773289 852177.8371853968 1227593.9614778468 682275.1089485119 797227.9950627019 898052.8361195723 0.8101533104763595 0.6490024544985791 0.7220038702481505 0.8417945543839241 0.7780075412893643 0.948917260667648 1.366950709472953 0.7597271357624994 0.8877294998671481 1.0 19.776440801547206 -6.287531619465584 4.207394678267266 1.0045232942157545 0.7543874762021752 0.37349816139774394 0.15137092177792813 0.24456338281944132 10.293167228854616 0.05621004728422736 0.05124321927890235 5.15784611227732e-07 6.287531619465584 -0.2501358180135793 SGPFGQIFRPDNFVFGQSGAGNNWAK ddPTM_KYSE-520_SHP099_60min_R1 2 SGPFGQIFRPDNFVFGQSGAGNNWAK 26 1 P04350;M0R278;M0QZL7;M0QY85;M0R1I1;Q5JP53;P07437;Q5ST81;Q9BVA1;Q13885;P68371 P04350;Q5JP53;P68371 TUBB4A;TUBB;TUBB2B;TUBB2A;TUBB4B Tubulin beta-4A chain;Tubulin beta chain;Tubulin beta-2B chain;Tubulin beta-2A chain;Tubulin beta-4B chain 0 ; 205.43 3.1170999999999998e-21 229830000.0 152759.0 160941.0 139499.0 116260.0 197797.0 179949.0 119396.0 120545.0 125521.0 102577.0 False True 144285.15375248322 153209.1527826339 148491.32874629163 127309.31544515654 213362.49858901807 178825.87154230772 131465.7128726683 120126.85753041449 102729.55052691238 101668.2475836984 1.419176165436514 1.5069518401652833 1.4605477351623095 1.2522033031045325 2.098614893635964 1.7589156476321608 1.2930852650375342 1.1815572746202796 1.0104388830184199 1.0 16.633509650129824 -7.091194190207508 2.6697065345430286 1.0605996582517467 1.5795546186630767 0.5280582806288974 0.21994859050105783 0.255234628890005 3.5228440372113217 0.13217633587093838 0.06907522994435317 8.10598526207699e-08 7.091194190207508 0.5189549604113299 SGPIS(ph)PGIHSCDLTVEGLATVTR ddPTM_KYSE-520_SHP099_60min_R1 2 SGPISPGIHSCDLTVEGLATVTR 23 0 Q9BUB4-2;Q9BUB4 Q9BUB4-2 ADAT1 tRNA-specific adenosine deaminase 1 1 S(0.013)GPIS(0.987)PGIHSCDLTVEGLATVTR;S(0.019)GPIS(0.981)PGIHSCDLTVEGLATVTR 254.55 2.4599e-29 1252440000.0 396310.0 504360.0 379940.0 353810.0 348710.0 476430.0 378110.0 631150.0 741130.0 573710.0 True False 374325.8942756015 480129.78854020586 404431.5403254935 387435.9960231447 376151.4931115062 473456.4236472645 416333.04879798775 628960.6879615168 606559.4743669238 568627.3757396257 0.6582973494526321 0.8443662915730902 0.7112417684770116 0.6813530486800754 0.6615078857612826 0.8326303724498485 0.7321720102843352 1.106103425188445 1.0667081822748317 1.0 19.117124031582875 -7.2572765080958295 24.758894007186694 1.0648043656462196 0.7344540481625386 0.8410926304943861 0.0648944231585722 110.46974037474605 657029.5159770148 0.03185615674433347 0.01753572715561867 5.529979125067932e-08 7.2572765080958295 -0.33035031748368104 SGPKPFSAPKPQT(ph)S(ph)PSPKR ddPTM_KYSE-520_SHP099_60min_R1 1 SGPKPFSAPKPQTSPSPKR 19 3 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 2 SGPKPFSAPKPQT(0.693)S(0.722)PS(0.585)PKR 86.67399999999999 0.0032399 8873800000.0 9892000.0 9181600.0 7169700.0 9152800.0 8314200.0 8265000.0 8037900.0 8094900.0 10374000.0 6749600.0 True False 9343271.040786881 8740502.154137436 7631870.333925608 10022679.360110335 8968480.238673061 8213415.069253914 8850449.374344368 8066820.681263867 8490343.107258456 6689803.795109346 1.3966435080827604 1.3065408824885532 1.1408212509169506 1.498202289196811 1.3406193235786028 1.2277512645824413 1.322975926560744 1.2058381573404595 1.2691468041955751 1.0 22.67353246808722 -9.136657010163434 0.39448267205314375 0.939713152460692 1.332561257750234 0.5212712934988395 0.09093341295601463 4.433715851822605 0.8504289320026585 0.49427491556371217 0.06594834592847935 7.300338365646588e-10 9.136657010163434 0.39284810528954195 SGPKPFSAPKPQT(ph)SPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SGPKPFSAPKPQTSPSPK 18 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 2 SGPKPFSAPKPQT(0.767)S(0.237)PS(0.996)PK;S(0.004)GPKPFS(0.092)APKPQT(0.504)S(0.404)PS(0.996)PK 72.033 0.038695 68959000000.0 27982000.0 25229000.0 23830000.0 21264000.0 24876000.0 22530000.0 21811000.0 24103000.0 28935000.0 19184300.0 True False 26429782.679265965 24016960.970498975 25366119.929348115 23284924.16674527 26833599.674921367 22389381.912920833 24015868.73484676 24019392.318682518 23681133.391991835 19014342.027159568 1.3899919671958347 1.2630971366873385 1.3340519431656295 1.2245979447243414 1.4112294622970905 1.1774996937017568 1.2630396939606507 1.263225005859991 1.2454353328748557 1.0 24.180584680982946 -13.649546045728778 0.17596355544514605 4.654827503326742e-12 1.3484341302658724 0.6766615584923756 0.06256864250709776 65.58256178152058 0.7004639255759771 23.00687006712731 0.19807832499521114 2.2410624263154905e-14 13.649546045728778 1.3484341302612177 SGPKPFSAPKPQT(ph)SPSPK ddPTM_KYSE-520_SHP099_60min_R1 1 SGPKPFSAPKPQTSPSPK 18 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 SGPKPFSAPKPQT(0.621)S(0.371)PS(0.008)PK 83.60600000000001 0.006914399999999999 81241000000.0 358440.0 292360.0 382240.0 271470.0 318440.0 309200.0 247120.0 255990.0 441000.0 256900.0 True False 338556.6186675749 278314.58675869333 406879.8020056235 297270.42717956856 343499.41632424656 307270.1681080839 272101.301258784 255102.03043851507 360925.5167053192 254624.06586517574 1.329633228175854 1.0930411695886664 1.597962865855216 1.1674875513808431 1.3490453667727174 1.2067601193313142 1.0686393697085277 1.001877138249738 1.4174839109529829 1.0 17.958009256847806 -6.504168760544299 4.5921831714697365 1.1227828905486952 1.3028531408700574 0.21934984624509835 0.16490943563161825 0.3184220518597388 17.068623291720662 0.05985098367616773 0.04934940504316211 3.132068411403585e-07 6.504168760544299 0.18007025032136226 SGPKPFSAPKPQTS(ph)PSPK ddPTM_KYSE-520_SHP099_60min_R1 6 SGPKPFSAPKPQTSPSPK 18 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 SGPKPFSAPKPQT(0.076)S(0.777)PS(0.146)PK;SGPKPFSAPKPQT(0.005)S(0.992)PS(0.003)PK;SGPKPFSAPKPQT(0.152)S(0.721)PS(0.127)PK;SGPKPFSAPKPQT(0.02)S(0.98)PSPK;SGPKPFSAPKPQT(0.248)S(0.752)PSPK;SGPKPFSAPKPQT(0.177)S(0.799)PS(0.024)PK 199.89 5.8678e-13 88368460000.0 2443748.0 2087639.0 2026338.0 1771150.0 1893469.0 1870245.0 1782843.0 1767785.0 2517270.0 1862540.0 True False 2308188.4269491388 1987345.6888299736 2156958.989735434 1939479.5634843328 2042474.2379351058 1858572.10722284 1963070.169310917 1761652.9664391207 2060197.223212694 1846039.344634195 1.2503462798115614 1.0765456839294936 1.1684252537764028 1.0506165912019896 1.1064088335234457 1.0067890008005915 1.0633956286017903 0.9542878766693913 1.116009379323893 1.0 20.816001870793098 -1.0000000000146159 0.35833303777332615 1.019689728690182 3.544631505746645 0.5633627533877474 0.05430523567166709 44.43690245877418 0.6220955623408881 0.04125949081161845 76.39902893034689 0.09999999999663457 1.0000000000146159 2.524941777056463 SGPKPFSAPKPQTSPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 SGPKPFSAPKPQTSPSPK 18 2 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 1 SGPKPFSAPKPQT(0.155)S(0.155)PS(0.69)PK;SGPKPFSAPKPQT(0.006)S(0.035)PS(0.958)PK;SGPKPFSAPKPQT(0.111)S(0.111)PS(0.779)PK 107.25 0.00020546 78571140000.0 6822700.0 5835100.0 5719000.0 5218600.0 5410600.0 5119900.0 5119300.0 5178900.0 6175300.0 4890600.0 True False 6444231.230284738 5554773.037336341 6087655.890723538 5714574.1749707 5836383.43789715 5087944.804969531 5636808.803553303 5160935.60466435 5054021.1866448 4847273.088829224 1.3294549558463669 1.1459583430810996 1.255892907035264 1.1789255670657826 1.2040550080306758 1.0496509504890381 1.1628824496279366 1.0647090663321561 1.042652455107602 1.0 22.208741933611275 -5.489395141425566 0.23932848198316944 0.9748003911424373 1.3955986017589381 0.7252882285868479 0.051963704540553234 3.0796966493875657 0.26246964430116104 0.09124903967812373 0.38695286632027304 3.2404465220750525e-06 5.489395141425566 0.4207982106165008 SGPPS(ph)PPSTATSFGGPRPR ddPTM_KYSE-520_SHP099_60min_R1 3 SGPPSPPSTATSFGGPRPR 19 1 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2;A0A087X0E3 A0A0A0MS59 SRCAP Helicase SRCAP 1 SGPPS(1)PPSTATSFGGPRPR;SGPPS(1)PPSTATSFGGPRPR;SGPPS(1)PPSTATSFGGPRPR 272.3 1.3037e-35 12622900000.0 1334450.0 1323070.0 1183250.0 966870.0 1011600.0 1352340.0 1042230.0 1276800.0 1475750.0 1291480.0 True False 1260425.3983398776 1259507.7312314434 1259524.1882669383 1058761.0340999342 1091207.164783343 1343899.5444349488 1147588.7795845843 1272371.0788073617 1207791.0006301 1280038.4919562351 0.9846777313810434 0.9839608255112583 0.983973682183615 0.8271321845031934 0.8524799618452815 1.049889946966452 0.8965267738400328 0.9940100136073599 0.9435583447059299 1.0 20.28775576339274 -7.291962783707152 24.685091869729074 0.9765881306260055 0.9397445963166788 0.0712877730135616 0.06493791720632693 2093.1037118990826 1692737.1709587004 0.03734122699451689 0.017941584386118262 5.105487489025647e-08 7.291962783707152 -0.03684353430932663 SGPPSPPST(ph)ATSFGGPRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SGPPSPPSTATSFGGPRPR 19 1 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2;A0A087X0E3 A0A0A0MS59 SRCAP Helicase SRCAP 1 SGPPS(0.129)PPS(0.135)T(0.245)AT(0.245)S(0.245)FGGPRPR 71.685 0.040310000000000006 763840000.0 279400.0 274050.0 234830.0 225180.0 226180.0 262860.0 209200.0 295040.0 335540.0 276910.0 True False 263901.12502990843 260884.22664256342 249967.51754128485 246581.03949716434 243979.07921183918 261219.39323703415 230347.97759524782 294016.5751028533 274614.39427506266 274456.79283272015 0.9615397830242616 0.950547530450707 0.9107718375680307 0.8984329990602713 0.8889525986720359 0.951768730301552 0.839286851740061 1.0712672551050857 1.0005742304306477 1.0 18.066219521035865 -7.271689148401202 24.999792882699516 1.0269405584632052 0.9155528715797336 0.6281723395755501 0.03857055888395739 452.3650608341451 1103338.4335644627 0.020342191470424816 0.009945709496601264 5.349471173551556e-08 7.271689148401202 -0.11138768688347156 SGPPSPPSTATS(ph)FGGPRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SGPPSPPSTATSFGGPRPR 19 1 A0A0A0MS59;A0A0C4DFX4;Q6ZRS2-3;Q6ZRS2-2;Q6ZRS2;A0A087X0E3 A0A0A0MS59 SRCAP Helicase SRCAP 1 SGPPS(0.104)PPS(0.311)T(0.052)AT(0.052)S(0.481)FGGPRPR 100.41 0.00083401 2888500000.0 259120.0 278920.0 221140.0 212940.0 225590.0 258700.0 191390.0 244520.0 300630.0 277180.0 True False 244746.09705708607 265520.26453254453 235395.0382365103 233177.75357725474 243342.6495684796 257085.35734010715 210737.5689863977 243671.8171913972 246043.1702655785 274724.40084277705 0.8908786271123861 0.9664968372594614 0.8568406647330367 0.8487697229002269 0.8857700620038589 0.9357936774143167 0.7670871911629045 0.8869682359625891 0.8955999886096297 1.0 18.06762552977766 -8.270652627380526 2.825880870414651 0.9999750796509669 0.879539695756325 0.33894397210679117 0.050052726671193794 2.222997318364066 21.619118531556875 0.04925415088254764 0.013185940332027255 5.362253885955382e-09 8.270652627380526 -0.12043538389464192 SGPS(ph)PLS(ph)SPNGK ddPTM_KYSE-520_SHP099_60min_R1 3 SGPSPLSSPNGK 12 0 O75179-6;O75179-2;O75179;H0YM23;O75179-4;O75179-7 O75179-6 ANKRD17 Ankyrin repeat domain-containing protein 17 2 SGPS(0.986)PLS(0.686)S(0.328)PNGK;S(0.002)GPS(0.997)PLS(0.636)S(0.364)PNGK;SGPS(1)PLS(0.641)S(0.359)PNGK 203.29 2.2555999999999997e-08 1493370000.0 3609330.0 3409580.0 3205520.0 3368690.0 3470340.0 3259600.0 3069100.0 3173610.0 3791720.0 3098090.0 True False 3409113.2698790254 3245778.65891608 3412152.9482133444 3688849.2847664235 3743436.014466411 3239255.6273127766 3379354.5795295145 3162601.4876361405 3103239.229482746 3070643.332877549 1.1102276950818286 1.057035385439705 1.1112176108762724 1.2013278277127497 1.2191047961791046 1.054911064606523 1.1005363414716967 1.0299475206950903 1.0106153314050483 1.0 21.550109516749707 -7.136288554706414 1.369790220087569 1.0032351791066307 1.1322959108852433 0.5287930218935637 0.048711420099711314 0.4091044721290618 1.407665069862027 0.042387928386350734 0.017803263416569525 7.30653460109977e-08 7.136288554706414 0.12906073177861255 SGPS(ph)PLSS(ph)PNGK ddPTM_KYSE-520_SHP099_60min_R1 1 SGPSPLSSPNGK 12 0 O75179-6;O75179-2;O75179;H0YM23;O75179-4;O75179-7 O75179-6 ANKRD17 Ankyrin repeat domain-containing protein 17 2 SGPS(1)PLS(0.175)S(0.825)PNGK 151.74 1.6773e-05 0.0 570020.0 541780.0 508170.0 512670.0 551830.0 520340.0 539570.0 504600.0 632880.0 539480.0 True False 538399.8542933016 515752.0755716411 540927.4513007479 561394.0026601439 595255.881516797 517092.36504967685 594115.001295735 502849.66037452593 517964.945606491 534700.6269090892 1.0069183150309666 0.9645623169604592 1.011645440604126 1.0499220954824 1.1132507641851028 0.9670689335802741 1.111117083834554 0.9404321503816404 0.9687008384498423 1.0 19.028371842660352 -9.527453086559843 8.639852215717678 1.0000000045308708 1.0164368134533621 0.005332656618884268 0.057232596395798474 0.0 0.0 0.056024392145669726 0.013587910966330633 2.968567397289446e-10 9.527453086559843 0.01643680892249133 SGPS(ph)PLSSPNGK ddPTM_KYSE-520_SHP099_60min_R1 5 SGPSPLSSPNGK 12 0 O75179-6;O75179-2;O75179;H0YM23;O75179-4;O75179-7 O75179-6 ANKRD17 Ankyrin repeat domain-containing protein 17 1 SGPS(0.967)PLS(0.01)S(0.023)PNGK;S(0.001)GPS(0.998)PLSSPNGK;SGPS(0.999)PLS(0.001)SPNGK;S(0.001)GPS(0.895)PLS(0.085)S(0.019)PNGK;SGPS(1)PLSSPNGK 143.58 3.0036e-05 3109180000.0 6791460.0 7059900.0 5911570.0 4797230.0 5220880.0 6894170.0 5400820.0 6638000.0 8077400.0 6619500.0 True False 6414724.175360131 6720731.80687406 6292639.261046432 5253157.29686021 5631733.55325629 6851140.927767487 5946787.59252374 6614974.327320841 6610747.774683769 6560856.379893074 0.9777266569984993 1.0243680729654367 0.9591185809723497 0.8006816477433428 0.8583839101425467 1.044244917289158 0.9064041716792859 1.0082486102871604 1.007604402825155 1.0 22.645452709531494 -7.278927174904947 23.4888841732819 1.005944909433078 0.9384454242334908 0.16528041739769894 0.06856046941718212 797.8434668560977 1071619.3181892617 0.04085724858304681 0.019715259814971284 5.261054795064499e-08 7.278927174904947 -0.06749948519958715 SGPSPS(ph)SKS(ph)G ddPTM_KYSE-520_SHP099_60min_R1 2 SGPSPSSKSG 10 1 J3KSV9 J3KSV9 RECQL5 2 SGPS(0.095)PS(0.886)S(0.219)KS(0.8)G;S(0.001)GPS(0.108)PS(0.859)S(0.129)KS(0.903)G 56.951 0.038742 2116820000.0 867850.0 791270.0 746120.0 708570.0 771340.0 655260.0 622520.0 784430.0 863140.0 643590.0 True False 819708.6304839163 753256.2014795162 794216.0890342087 775912.279760662 832040.0696757447 651170.2792836446 685450.3968097214 781708.9954173381 706415.533988728 637888.2933054434 1.285034760923902 1.180859108694805 1.2450708021598855 1.2163764218653372 1.3043664202774994 1.0208218055066913 1.0745618065160252 1.2254637741768812 1.1074282776506001 1.0 19.282944276476385 -6.257794563471007 24.999872471805293 1.0990532855532942 1.240968270887647 0.5975257478389474 0.06540427837205273 261.74409744673187 1795309.834429695 0.022387919092263005 0.021574563510278776 5.523386530582717e-07 6.257794563471007 0.14191498533435287 SGQGFHGNSEVNAILS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SGQGFHGNSEVNAILSPR 18 0 Q8TB72-4;Q8TB72-3;Q8TB72;C9JW01;A0A0A0MR59;Q8TB72-2 Q8TB72-4 PUM2 Pumilio homolog 2 1 SGQGFHGNSEVNAILS(1)PR 177.1 1.7027e-06 0.0 34704.0 72060.0 86526.0 156570.0 47108.0 49656.0 47319.0 42982.0 58760.0 58856.0 True False 32778.89993929113 68598.12943573485 92103.60440649503 171450.365725513 50815.131592144826 49346.07848504207 52102.466308936564 42832.90547407424 48090.665219057926 58334.58162927513 0.5619119744032085 1.1759427687625512 1.5788851455527189 2.9390862321616593 0.8710979006429236 0.8459146719975412 0.8931660235442404 0.7342626668051495 0.824393762257201 1.0 15.832063768192047 -5.941751469253231 24.99998856904132 0.8465044968383189 1.5832809657181959 0.27695521104195864 0.5555332563530001 108.60804168812429 46613.22621538819 0.1826887248883903 0.2071495388422216 1.1435325491680123e-06 5.941751469253231 0.736776468879877 SGRS(ph)PTGNTPPVIDSVSEK ddPTM_KYSE-520_SHP099_60min_R1 3 SGRSPTGNTPPVIDSVSEK 19 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.449)GRS(0.486)PT(0.023)GNT(0.042)PPVIDSVSEK;S(0.282)GRS(0.675)PT(0.03)GNT(0.013)PPVIDSVSEK;S(0.002)GRS(0.951)PT(0.047)GNT(0.001)PPVIDSVSEK 227.25 2.577e-19 1986660000.0 1814860.0 1794860.0 1773220.0 1250290.0 1360020.0 1569230.0 1295780.0 1509270.0 2276710.0 1649080.0 True False 1714186.0979662826 1708632.2314602127 1887524.598452315 1369117.1856866057 1467045.8365447212 1559435.8534936858 1426770.0879941215 1504034.6946362648 1863316.8551885867 1634470.4341648251 1.048771554465095 1.0453735936393873 1.1548233354351218 0.837651851675244 0.8975664569266718 0.9540924209439859 0.8729249903643357 0.9201969415890904 1.140012579145059 1.0 20.640391849843503 -5.255284961557533 24.99988925174537 0.9380048551988623 1.0792279020227478 0.36051831346908014 0.08303987942704635 541.8150549052552 2200902.9721697643 0.022886442587722503 0.038420201521720744 5.555396213141733e-06 5.255284961557533 0.14122304682388542 SGS(ph)AAQAEGLCK ddPTM_KYSE-520_SHP099_60min_R1 3 SGSAAQAEGLCK 12 0 F8WF93;H7BZZ2;F8WE30;H7C0X4;Q92685 F8WF93 ALG3 Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase 1 S(0.001)GS(0.999)AAQAEGLCK;SGS(1)AAQAEGLCK;S(0.028)GS(0.972)AAQAEGLCK 177.74 9.9056e-07 1715110000.0 2566440.0 2641350.0 2464590.0 2807180.0 2625670.0 2901160.0 2642280.0 3271000.0 3980300.0 2526640.0 True False 2424074.4571287 2514455.5812528217 2623461.414883426 3073973.543190559 2832295.2909812955 2883052.7843093406 2909387.448567738 3259653.664457139 3257577.8551976914 2504255.935296175 0.9679819154914003 1.0040729247409932 1.047601156857457 1.2274997534654957 1.1309927436176062 1.151261236391306 1.161777199990403 1.3016455780393805 1.3008166654549316 1.0 21.255950582758413 -5.093872258396494 3.208023953080869 1.190415503313827 0.9892441211025549 0.48754186724502224 0.08329955171241148 0.2088543165642966 4.088579437988568 0.02367564678225547 0.04690156093220392 8.056153667638151e-06 5.093872258396494 -0.20117138221127218 SGS(ph)GS(ph)ESTGAEER ddPTM_KYSE-520_SHP099_60min_R1 1 SGSGSESTGAEER 13 0 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 2 S(0.134)GS(0.866)GS(0.941)ES(0.057)T(0.002)GAEER 119.96 0.0053793 0.0 132600.0 121360.0 115790.0 117940.0 121850.0 121450.0 129390.0 124250.0 136500.0 124360.0 True False 125244.41366845329 115529.68343492625 123254.00867055029 129148.98214004608 131438.90176833767 120691.98550041008 142470.00392470884 123819.00575016791 111715.0408849797 123258.26715061584 1.0161136982025756 0.9372976442525708 0.9999654507550366 1.0477916420992035 1.0663698655419638 0.9791796387412304 1.1558657055483115 1.0045492980918422 0.9063492735012179 1.0 16.91132488840069 -1.37701429291397 16.49888649753646 1.014762941535606 1.0191647690070564 0.0 0.06574783650286392 0.0 0.0 0.015343553967734054 0.0 0.041974516967705156 1.37701429291397 0.004401827471450348 SGS(ph)GSESEPSSR ddPTM_KYSE-520_SHP099_60min_R1 2 SGSGSESEPSSR 12 0 I3L0Z8;I3L2N2;O14641 I3L0Z8 DVL2 Segment polarity protein dishevelled homolog DVL-2 1 S(0.042)GS(0.955)GS(0.002)ESEPSSR;S(0.014)GS(0.982)GS(0.005)ESEPSSR 169.09 2.7467000000000003e-06 109007000.0 267790.0 210340.0 215640.0 241850.0 237680.0 257010.0 272740.0 238830.0 282670.0 234120.0 True False 252935.15487387002 200234.9506732232 229540.499436199 264835.35128514614 256384.06378578994 255405.905256981 300311.2208858884 238001.55447334092 231344.25353082188 232045.87894260403 1.0900221802104613 0.8629110397722289 0.9892030855371289 1.1413059886775774 1.104885227671748 1.100669860722478 1.294188986481288 1.0256659396748433 0.9969763504744004 1.0 17.82405055038981 -5.172719055487741 5.601192133845906 1.1046428872655598 0.9657383782007639 0.22189958042969127 0.09607558137720029 0.2959016638259164 14.63475663603469 0.026372438693771365 0.04643412409449093 6.718633398610715e-06 5.172719055487741 -0.1389045090647959 SGS(ph)GSESTGAEER ddPTM_KYSE-520_SHP099_60min_R1 2 SGSGSESTGAEER 13 0 Q14669-3;Q14669;Q14669-2;G5E9G6;H7C1L9 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 S(0.009)GS(0.991)GSESTGAEER;S(0.001)GS(0.962)GS(0.038)ESTGAEER 199.38 6.4016e-06 0.0 521230.0 469740.0 438750.0 420280.0 447100.0 440920.0 474080.0 475200.0 548180.0 479030.0 True False 492316.3328537556 447172.9853058855 467032.52702482126 460223.2848382109 482284.2263489836 438168.0547290303 522004.63297492795 473551.6421125136 448644.3304932466 474786.1668797008 1.0369222340433026 0.9418408043450605 0.9836691959543882 0.9693274929697356 1.0157924977439003 0.9228745176142661 1.0994520678762554 0.9973998299586095 0.9449397682365968 1.0 18.856918376424254 SGS(ph)ISVK ddPTM_KYSE-520_SHP099_60min_R1 2 SGSISVK 7 0 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 SGS(0.998)IS(0.002)VK;S(0.002)GS(0.986)IS(0.012)VK 165.26 0.00081694 1451350000.0 2594740.0 2393320.0 2322630.0 2295890.0 2120830.0 2630010.0 2118930.0 2589450.0 2897850.0 2653540.0 True False 2450804.5997140463 2278341.314753441 2472350.4461393952 2514090.695315504 2287727.255127969 2613595.1320373258 2333132.1231639464 2580467.802332175 2371673.4888537633 2630031.70002288 0.9318536349553223 0.8662790318206509 0.9400458732561615 0.9559164991409163 0.8698477874270744 0.9937504297056909 0.8871117877186231 0.9811546386721217 0.9017661227555284 1.0 21.32664875788745 -13.999999997797273 0.1334730629817567 1.2470957369821858 0.896795291821075 0.22804172129848221 0.04176433998004164 201.35364403351872 1.676416558352732 13.310942863670803 0.2755179888981501 1.000000005071966e-14 13.999999997797273 -0.3503004451611108 SGS(ph)IVELIAGGGS(ph)SCSPVLSR ddPTM_KYSE-520_SHP099_60min_R1 2 SGSIVELIAGGGSSCSPVLSR 21 0 P42858 P42858 HTT Huntingtin 2 S(0.016)GS(0.984)IVELIAGGGS(0.65)S(0.319)CS(0.03)PVLSR;S(0.119)GS(0.881)IVELIAGGGS(0.496)S(0.292)CS(0.208)PVLS(0.004)R 195.18 1.5297e-16 991000000.0 886160.0 867890.0 807000.0 779430.0 817300.0 811510.0 747760.0 808060.0 1015480.0 811300.0 True False 837002.9382838358 826195.261670551 859020.5112456528 853506.7928558257 881616.8601991164 806445.0650756491 823350.8782343321 805257.028462622 831094.4301676133 804112.5131818481 1.0409027649275613 1.0274622619679454 1.0682839741500048 1.06142707502278 1.0963849532829504 1.0029007780075094 1.0239249666397534 1.0014233272856867 1.0335549025086037 1.0 19.617037855011063 -6.287454222983352 24.98322486775181 1.0131725099243225 1.05780869407965 0.5893156838592264 0.019405653301248642 594.4958531460709 570919.3508023238 0.007096333366174034 0.006260053257082487 5.158765384187901e-07 6.287454222983352 0.04463618415532755 SGS(ph)IVELIAGGGSSCS(ph)PVLSR ddPTM_KYSE-520_SHP099_60min_R1 9 SGSIVELIAGGGSSCSPVLSR 21 0 P42858 P42858 HTT Huntingtin 2 S(0.082)GS(0.918)IVELIAGGGS(0.001)S(0.005)CS(0.994)PVLSR;S(0.31)GS(0.69)IVELIAGGGSS(0.003)CS(0.997)PVLSR;S(0.027)GS(0.973)IVELIAGGGSSCS(1)PVLSR;S(0.063)GS(0.937)IVELIAGGGSSCS(1)PVLSR;S(0.046)GS(0.954)IVELIAGGGSSCS(1)PVLSR;S(0.07)GS(0.93)IVELIAGGGSS(0.002)CS(0.998)PVLSR;S(0.005)GS(0.995)IVELIAGGGSS(0.003)CS(0.995)PVLS(0.002)R;S(0.326)GS(0.674)IVELIAGGGS(0.002)S(0.004)CS(0.994)PVLSR;S(0.115)GS(0.885)IVELIAGGGS(0.006)S(0.098)CS(0.895)PVLS(0.002)R 409.78 1.3850999999999998e-107 12864210000.0 4511170.0 4163980.0 3882550.0 3760300.0 3949350.0 3845370.0 3523430.0 3827350.0 4714580.0 4095460.0 True False 4260926.40730556 3963936.150538591 4132825.38529964 4117677.7814245787 4260141.376272335 3821369.6194624254 3879612.6897630203 3814073.8161602076 3858531.116890169 4059177.4106196645 1.04970194112681 0.9765368077207215 1.0181435712780862 1.0144118782913663 1.0495085445457264 0.9414147825776021 0.955763273517717 0.9396174225304333 0.9505697156264808 1.0 21.95275596524247 -6.27177898408813 24.990991795546712 0.9535922648876773 1.0185555829030477 0.6205688537857659 0.024944367536885413 455.41168769573557 1100735.0469967083 0.008417548461458145 0.007503359346803968 5.348364726804732e-07 6.27177898408813 0.06496331801537036 SGS(ph)IVELIAGGGSSCSPVLSR ddPTM_KYSE-520_SHP099_60min_R1 2 SGSIVELIAGGGSSCSPVLSR 21 0 P42858 P42858 HTT Huntingtin 1 S(0.03)GS(0.97)IVELIAGGGSSCSPVLSR;S(0.021)GS(0.979)IVELIAGGGSSCSPVLSR 226.45 1.9117e-19 164160000.0 125658.0 173143.0 138788.0 123317.0 136846.0 211140.0 145873.0 193891.0 191013.0 198215.0 True False 118687.50024698715 164824.9503870584 147734.4965486514 135037.01060339191 147615.0016527693 209822.19694159366 160619.26642328655 193218.4373754996 156329.85424588015 196458.96930893662 0.6041337825627503 0.8389790039459438 0.7519865194667453 0.6873547747827327 0.7513782759423981 1.0680204506806865 0.8175715620838301 0.9835052991225807 0.7957379334513741 1.0 17.58386850979326 -6.1151284090379985 8.089834807861926 0.9244162997413665 0.7298942679332877 0.5475680728635146 0.09372452746333937 0.23329320759701866 14.953706329652807 0.029116720277599473 0.029151112955795914 7.671346350291937e-07 6.1151284090379985 -0.1945220318080788 SGS(ph)LKGPDDPR ddPTM_KYSE-520_SHP099_60min_R1 1 SGSLKGPDDPR 11 1 A8MVZ6;Q96G01-4;Q96G01-3;Q96G01 A8MVZ6 BICD1 Protein bicaudal D homolog 1 1 S(0.083)GS(0.917)LKGPDDPR 92.99 0.0040413 1242700000.0 1661400.0 1396300.0 1321800.0 1244400.0 1377900.0 1337600.0 1216400.0 1253800.0 1552400.0 1260600.0 True False 1569238.83008121 1329219.6521109699 1407005.3429547749 1362667.4018574962 1486332.8908214394 1329251.5422424742 1339365.5829199764 1249450.86043912 1270523.2928193584 1249432.06473196 1.2559617080244039 1.0638590841640732 1.1261159231227342 1.090629447027861 1.1896068083864182 1.063884607865925 1.0719795183160357 1.0000150434006703 1.016880652164088 1.0 20.25284102934119 -6.81182281588929 1.3974156401497722 1.0040448607358026 1.136574704344456 0.5564812878289428 0.05242135026599146 0.3333195846021471 1.3076564930008372 0.03175911243963741 0.017779994724934176 1.542329566525249e-07 6.81182281588929 0.1325298436086535 SGS(ph)LLQVEETEREEGLGAGR ddPTM_KYSE-520_SHP099_60min_R1 2 SGSLLQVEETEREEGLGAGR 20 1 Q8WYL5-4;Q8WYL5;Q8WYL5-2;Q8WYL5-5 Q8WYL5-4 SSH1 Protein phosphatase Slingshot homolog 1 1 S(0.024)GS(0.976)LLQVEETEREEGLGAGR;S(0.038)GS(0.962)LLQVEETEREEGLGAGR 187.72 4.3991999999999996e-13 470880000.0 183077.0 202909.0 177086.0 129193.0 180220.0 203837.0 145171.0 155539.0 224186.0 177785.0 True False 172921.35385504874 193160.94706738144 188501.24690761793 141471.46387670818 194402.28868846773 202564.77767350417 159846.30141242687 154999.47151207557 183479.47366915806 176209.96321463678 0.981336984018422 1.0961976470768404 1.0697536249866273 0.8028573486754859 1.103242320365684 1.1495648371866765 0.9071354337536649 0.8796294414026676 1.0412548207939099 1.0 17.426935973462324 SGS(ph)LVQFLLYK ddPTM_KYSE-520_SHP099_60min_R1 1 SGSLVQFLLYK 11 0 O15479 O15479 MAGEB2 Melanoma-associated antigen B2 1 S(0.004)GS(0.996)LVQFLLYK 157.52 2.7349000000000002e-05 19166000.0 51923.0 47036.0 42242.0 38767.0 40944.0 51690.0 34677.0 36212.0 48472.0 31691.0 True False 49042.72768406563 44776.319957524625 44964.98690958971 42451.40402427645 44166.0598605073 51367.38353656802 38182.48957490633 36086.38902394432 39670.706679683026 31410.242395224926 1.5613610066097816 1.4255324551182593 1.431538997496734 1.351514690339672 1.4061037576463131 1.635370491262972 1.2156063329428792 1.1488733060344123 1.2629863272151596 1.0 14.938947455969432 -6.909957066638705 7.180931589959368 1.1599418480235675 1.4562019010656808 0.7129452814485326 0.097302527554796 0.1299136555391553 8.77427875724355 0.04060684138880218 0.0272877012632131 1.230390398387048e-07 6.909957066638705 0.29626005304211334 SGS(ph)MDNTSAR ddPTM_KYSE-520_SHP099_60min_R1 3 SGSMDNTSAR 10 0 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.023)GS(0.946)MDNT(0.026)S(0.006)AR;S(0.015)GS(0.985)MDNTSAR;S(0.039)GS(0.961)MDNTSAR 152.38 7.5727e-05 573120000.0 1536890.0 1398620.0 1269090.0 1403960.0 1473350.0 1433630.0 1452280.0 1452690.0 1688610.0 1479470.0 True False 1451635.6479857406 1331428.1958285784 1350897.5720157942 1537391.9362840336 1589294.262785228 1424682.1833919536 1599090.6352869328 1447650.9574503957 1382000.990394033 1466363.0468102435 0.9899565125726952 0.9079799158365408 0.9212572390953117 1.0484388157682356 1.0838340929569896 0.9715753451991594 1.0905148208456354 0.9872391155788112 0.9424685062817684 1.0 20.483810904030275 -5.256431156758327 24.96895093569821 1.0210573114922243 0.9365560879125409 0.34897624963701146 0.0486096929624858 433.20960126604183 2159798.6940982346 0.013510182407949567 0.022469213308037004 5.540753675764999e-06 5.256431156758327 -0.08450122357968348 SGS(ph)MDPSGAHPSVR ddPTM_KYSE-520_SHP099_60min_R1 1 SGSMDPSGAHPSVR 14 0 Q07666;Q07666-3;Q07666-2 Q07666 KHDRBS1 KH domain-containing, RNA-binding, signal transduction-associated protein 1 1 S(0.008)GS(0.804)MDPS(0.186)GAHPS(0.003)VR 106.66 0.0011748 0.0 276530.0 314200.0 551340.0 307630.0 256000.0 356410.0 225540.0 219100.0 274840.0 345590.0 True False 261190.3296511118 299105.360376185 586880.25857519 336867.0627076682 276145.7435592487 354185.51298642333 248339.7842582797 218339.99323832442 224935.98415258486 342528.34146495163 0.7625364036565058 0.8732280636894106 1.713377223225311 0.9834720866218812 0.8061982327599733 1.0340327211220404 0.7250196675584886 0.6374362842634016 0.6566930584212719 1.0 18.385863838858327 -6.28556767664253 1.281789512317125 0.7345238048403415 1.0945075994237605 0.19076647335168184 0.26685627358462 0.6962249079533472 2.3284078844670852 0.13829569212928616 0.12208346962916115 5.181223460744577e-07 6.28556767664253 0.359983794583419 SGS(ph)NGSVVSLEQQQK ddPTM_KYSE-520_SHP099_60min_R1 7 SGSNGSVVSLEQQQK 15 0 Q2M1P5 Q2M1P5 KIF7 Kinesin-like protein KIF7 1 S(0.011)GS(0.989)NGSVVSLEQQQK;S(0.048)GS(0.9)NGS(0.035)VVS(0.017)LEQQQK;S(0.388)GS(0.612)NGSVVSLEQQQK;S(0.118)GS(0.882)NGSVVSLEQQQK;SGS(1)NGSVVSLEQQQK;S(0.012)GS(0.988)NGSVVSLEQQQK;S(0.054)GS(0.946)NGSVVSLEQQQK 391.33 6.267e-82 6906890000.0 9652220.0 9410980.0 8161330.0 6797760.0 7706560.0 8709810.0 8035160.0 9039130.0 10220810.0 8982190.0 True False 9116792.11537646 8958862.394631026 8687422.390389705 7443817.066578926 8313022.427671714 8655448.845050033 8847432.388404546 9007775.367778795 8364968.54965282 8902614.784638075 1.0240578005360805 1.0063180999463224 0.975828180882352 0.8361382859588196 0.9337731249493426 0.9722367028600923 0.9938015518397192 1.0118123254442257 0.9396080535897171 1.0 23.08579770122232 -6.505226274000529 6.109098889513183 0.986853128935784 0.9525365251621779 0.07658095561060763 0.050525976034509444 0.4873739547646903 69.88119977001057 0.020618884101386827 0.017199942246304948 3.1244510566671546e-07 6.505226274000529 -0.034316603773606125 SGS(ph)PISSEER ddPTM_KYSE-520_SHP099_60min_R1 2 SGSPISSEER 10 0 H8Y6P7;P0CAP2-3;P0CAP2;P0CAP1-11;P0CAP2-2 H8Y6P7 GCOM1;POLR2M DNA-directed RNA polymerase II subunit GRINL1A 1 S(0.144)GS(0.841)PIS(0.013)S(0.002)EER;S(0.087)GS(0.907)PIS(0.006)SEER 77.387 0.01779 791430000.0 1917770.0 1769130.0 1959880.0 1506490.0 1555800.0 1775660.0 1472220.0 1495780.0 1835900.0 1558360.0 True False 1811387.475120286 1684138.3392817322 2086217.0007188758 1649666.3566572668 1678232.6087089004 1764577.4472923675 1621046.365082579 1490591.488297676 1502546.839272778 1544554.142785735 1.172757512956648 1.0903718378199714 1.3506920495232402 1.0680534342952543 1.0865482550725383 1.1424510144460212 1.049523820614591 0.9650626332912275 0.972802958245806 1.0 20.558759013393903 -6.6695565004608905 0.8352810442674942 0.9662272994287024 1.1777407657787986 0.5262886370041309 0.07449085822019849 0.5049349657075997 0.7064857404205608 0.05841431232088808 0.03743425704602469 2.1401464817680727e-07 6.6695565004608905 0.21151346635009616 SGS(ph)PISSEERR ddPTM_KYSE-520_SHP099_60min_R1 1 SGSPISSEERR 11 1 H8Y6P7;P0CAP2-3;P0CAP2;P0CAP1-11;P0CAP2-2 H8Y6P7 GCOM1;POLR2M DNA-directed RNA polymerase II subunit GRINL1A 1 S(0.233)GS(0.766)PIS(0.001)S(0.001)EERR 90.697 0.0048827 328310000.0 1365100.0 1267600.0 1244100.0 1089600.0 1153100.0 1206600.0 1122600.0 1135400.0 1532700.0 1190600.0 True False 1289375.181740616 1206702.593293611 1324296.6766303799 1193155.2563998143 1243842.4097584744 1199069.161834456 1236083.3635201948 1131461.5624043525 1254400.3162227727 1180052.2102727846 1.0926424869307774 1.0225840711019607 1.122235664745928 1.011103785080832 1.0540570992794835 1.0161153476059126 1.0474819272907068 0.9588233067609782 1.0630040817709256 1.0 20.170419260975102 -5.8321529485251675 0.7824581433988032 1.011300823239247 1.0746299261495698 0.27469866329097314 0.0382775506846924 0.9121827815718767 1.2245091623996585 0.020814004319907955 0.0328134904625711 1.471794079135053e-06 5.8321529485251675 0.06332910291032268 SGS(ph)PRPTEPTDFLMLFEGS(ph)PSGK ddPTM_KYSE-520_SHP099_60min_R1 15 SGSPRPTEPTDFLMLFEGSPSGK 23 1 I3L2J8;Q9UPN4-3;Q9UPN4-2;Q9UPN4 I3L2J8 CEP131 Centrosomal protein of 131 kDa 2 S(0.022)GS(0.977)PRPTEPTDFLMLFEGS(0.972)PS(0.028)GK;S(0.104)GS(0.888)PRPT(0.004)EPT(0.004)DFLMLFEGS(0.997)PS(0.003)GK;S(0.078)GS(0.918)PRPT(0.001)EPT(0.004)DFLMLFEGS(0.99)PS(0.01)GK;S(0.175)GS(0.824)PRPT(0.001)EPT(0.001)DFLMLFEGS(0.954)PS(0.046)GK;S(0.1)GS(0.899)PRPTEPTDFLMLFEGS(0.996)PS(0.004)GK;S(0.089)GS(0.911)PRPTEPTDFLMLFEGS(0.986)PS(0.014)GK;S(0.245)GS(0.754)PRPTEPTDFLMLFEGS(0.969)PS(0.031)GK;S(0.106)GS(0.894)PRPTEPTDFLMLFEGS(0.994)PS(0.006)GK;S(0.415)GS(0.584)PRPT(0.001)EPTDFLMLFEGS(0.992)PS(0.008)GK;S(0.116)GS(0.883)PRPTEPTDFLMLFEGS(0.975)PS(0.025)GK;S(0.441)GS(0.559)PRPT(0.001)EPTDFLMLFEGS(0.5)PS(0.5)GK;S(0.434)GS(0.565)PRPT(0.001)EPT(0.001)DFLMLFEGS(0.969)PS(0.031)GK;S(0.122)GS(0.866)PRPT(0.002)EPT(0.009)DFLMLFEGS(0.97)PS(0.03)GK;S(0.11)GS(0.89)PRPTEPTDFLMLFEGS(0.979)PS(0.021)GK;S(0.425)GS(0.575)PRPTEPTDFLMLFEGS(0.975)PS(0.025)GK 223.56 2.4435999999999997e-21 4511811000.0 1931968.0 1888262.0 1773564.0 1665804.0 1758715.0 1646940.0 1539100.0 1656183.0 2050171.0 1686013.0 True False 1824797.8837572734 1797547.0591809554 1887890.7732427332 1824121.511317763 1897115.8647804803 1636660.8365586263 1694687.2481684778 1650438.087729018 1677911.6270051259 1671076.236518264 1.09198960758325 1.0756822578760363 1.129745449062341 1.091584854990442 1.135265898301071 0.979405248421614 1.0141292247081486 0.9876497862046999 1.004090412117345 1.0 20.67234612171666 -6.265846967302551 24.99999475779462 0.9973501857331442 1.1038787102284087 0.8926831833035922 0.018686581023986584 113.88387919003067 645951.1715405476 0.006314685114638864 0.0057643102314438015 5.421919093460237e-07 6.265846967302551 0.10652852449526451 SGS(ph)PRPTEPTDFLMLFEGSPSGK ddPTM_KYSE-520_SHP099_60min_R1 8 SGSPRPTEPTDFLMLFEGSPSGK 23 1 I3L2J8;Q9UPN4-3;Q9UPN4-2;Q9UPN4 I3L2J8 CEP131 Centrosomal protein of 131 kDa 1 S(0.046)GS(0.835)PRPT(0.114)EPT(0.004)DFLMLFEGSPSGK;S(0.001)GS(0.892)PRPT(0.103)EPT(0.005)DFLMLFEGSPSGK;S(0.014)GS(0.984)PRPT(0.001)EPT(0.001)DFLMLFEGSPSGK;S(0.018)GS(0.923)PRPT(0.033)EPT(0.026)DFLMLFEGSPSGK;S(0.125)GS(0.873)PRPTEPT(0.002)DFLMLFEGSPSGK;S(0.131)GS(0.868)PRPTEPTDFLMLFEGSPSGK;S(0.13)GS(0.868)PRPT(0.001)EPT(0.001)DFLMLFEGSPSGK;S(0.016)GS(0.98)PRPT(0.001)EPT(0.003)DFLMLFEGSPSGK 271.18 7.9361e-38 4894105000.0 3095121.0 3215546.0 2675970.0 2510440.0 2677861.0 3073971.0 2602904.0 3311918.0 4003533.0 3318414.0 True False 2923428.468159257 3061066.3435270535 2848467.307903386 2749031.4628086914 2888593.4257551245 3054785.2067573555 2866030.938215009 3300429.729465476 3276592.3280539555 3289015.433647026 0.8888460778420891 0.9306938216865674 0.8660547101005428 0.8358220015284109 0.8782547494926488 0.9287840900673597 0.8713947976331049 1.0034704293879804 0.9962228497118072 1.0 21.649224347334457 -7.264861758969178 24.934970370136572 0.9998849899388436 0.8861215416475086 0.7952416992064343 0.026555545868853905 136.7878600358972 996604.7521239826 0.014963210115452033 0.0076517131783835545 5.434232819735974e-08 7.264861758969178 -0.113763448291335 SGS(ph)PS(ph)DNS(ph)GAEEMEVSLAKPK ddPTM_KYSE-520_SHP099_60min_R1 1 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 3 S(0.123)GS(0.879)PS(0.999)DNS(1)GAEEMEVSLAKPK 94.72 0.011441 446160000.0 958910.0 894240.0 841970.0 824270.0 865620.0 821390.0 785180.0 841370.0 1031100.0 836700.0 True False 905717.3507603059 851279.3681183949 896244.7333996306 902608.3729741882 933739.3692959242 816263.4003308491 864553.6570183387 838451.4838472344 843878.2319157694 829287.48894275 1.0921632881680097 1.0265190051325652 1.0807406904718215 1.0884143135029254 1.1259537636174142 0.9842948449294645 1.042525865331152 1.011050443937322 1.0175943121867435 1.0 19.661512801696457 -6.270393259682567 24.999874771309354 1.0137482943222147 1.0798359557207933 0.6424432541985593 0.02665082061807753 467.6385933934326 1305675.7979766543 0.009595651464276371 0.00858070233886274 5.365457267277761e-07 6.270393259682567 0.06608766139857858 SGS(ph)PSDNS(ph)GAEEMEVSLAKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 2 S(0.002)GS(0.974)PS(0.024)DNS(1)GAEEMEVSLAKPK;S(0.184)GS(0.715)PS(0.105)DNS(0.996)GAEEMEVSLAKPK 215.59 3.5942e-19 1539930000.0 1954870.0 1904410.0 1698150.0 1736960.0 1717830.0 1757730.0 1674850.0 1897330.0 2174720.0 1682200.0 True False 1846429.4641632685 1812919.2850223116 1807615.4661360665 1902040.1561639332 1853013.4478843105 1746759.355073161 1844160.1829608036 1890748.6050701495 1779845.668229911 1667297.0167317954 1.1074388340132733 1.0873403279854494 1.0841592397731994 1.1407926344714974 1.1113877307335156 1.0476593777496983 1.1060777800560646 1.1340202651932767 1.0675036603368555 1.0 20.669079702080587 -8.028835834843866 10.498788496183748 1.0000000761745922 1.101121450590597 0.613897982303828 0.024823109168361477 0.8135254505289997 296.2633905569494 0.02475221377186158 0.006393663745785981 9.35759328296892e-09 8.028835834843866 0.10112137441600488 SGS(ph)PSDNSGAEEMEVSLAKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 S(0.118)GS(0.459)PS(0.39)DNS(0.033)GAEEMEVSLAKPK;S(0.039)GS(0.959)PS(0.002)DNSGAEEMEVSLAKPK 195.41 1.6152e-13 7158500000.0 1441850.0 1419970.0 1363990.0 1214190.0 1246080.0 1286210.0 1132730.0 1260570.0 1537780.0 1240990.0 True False 1361867.7062432838 1351752.509781576 1451914.9778611632 1329586.2525404657 1344139.4067746429 1278182.2862946265 1247237.4027794702 1256197.37688925 1258557.9162791509 1229995.7940756106 1.107213303332293 1.0989895382507957 1.1804227175852529 1.0809681292769795 1.0928000024462 1.0391761438950529 1.0140176159844656 1.0213021726902172 1.023221316968003 1.0 20.230221951655654 -6.158027826199353 1.3839555753608912 1.0145107219365794 1.1234521692293553 0.7978404215839634 0.023972435006651183 0.18364412974620908 0.7133847666468909 0.010734192791486439 0.010560214534513104 6.949797872839895e-07 6.158027826199353 0.10894144729277588 SGS(ph)PVATFK ddPTM_KYSE-520_SHP099_60min_R1 4 SGSPVATFK 9 0 Q9BQ67 Q9BQ67 GRWD1 Glutamate-rich WD repeat-containing protein 1 1 SGS(1)PVATFK;SGS(1)PVATFK;S(0.037)GS(0.963)PVATFK;S(0.008)GS(0.99)PVAT(0.002)FK 181.68 1.5836e-05 4067030000.0 6476800.0 5697600.0 5542300.0 5326100.0 5446500.0 5877700.0 5398800.0 5727400.0 7021300.0 5739000.0 True False 6117518.992819301 5423878.7437280435 5899565.525993536 5832290.942649637 5875108.563654094 5841015.094077886 5944563.391210435 5707532.986185213 5746408.912569295 5688156.924874441 1.0754835131336216 0.953538873023931 1.0371664502072018 1.0253393181093327 1.0328668215818924 1.0268730576920255 1.045077249049639 1.0034063865618825 1.0102409248662105 1.0 22.43952983590162 -3.93593388338719 14.984776707732852 1.0177430698278165 1.6020873493286154 0.3426328449403184 0.024885800761276927 1252251.7580064335 6925363.940029256 0.006038510537089346 22215252.61199174 0.0001158953780837308 3.93593388338719 0.5843442795007989 SGS(ph)QPACLDHMQDR ddPTM_KYSE-520_SHP099_60min_R1 1 SGSQPACLDHMQDR 14 0 O75815;O75815-3 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 S(0.177)GS(0.823)QPACLDHMQDR 91.64 0.0015769 302180000.0 358230.0 384770.0 328490.0 289410.0 364790.0 365830.0 319130.0 357260.0 454210.0 371640.0 True False 338358.26778619987 366285.07164845505 349664.99100258364 316915.4393857105 393496.8976288208 363546.71927225176 351390.7748086582 356020.7484451111 371736.91370231943 368347.5587315445 0.9185842549123527 0.994400703807589 0.9492800555179548 0.8603706794665681 1.06827611124635 0.9869665500815994 0.9539652604695433 0.9665348391913267 1.0092015133273766 1.0 18.490708155455444 -5.762059800814637 24.99999813434958 0.9931149626107649 0.9365420023375033 0.36939970211959205 0.04226918652845749 22.652821887581034 912825.4362259969 0.013297107848622756 0.01599665344917311 1.7295781860166753e-06 5.762059800814637 -0.05657296027326164 SGS(ph)RDSTPSRPAQQPLSR ddPTM_KYSE-520_SHP099_60min_R1 2 SGSRDSTPSRPAQQPLSR 18 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.034)GS(0.47)RDS(0.376)T(0.113)PS(0.007)RPAQQPLSR;S(0.008)GS(0.877)RDS(0.057)T(0.057)PS(0.001)RPAQQPLSR 114.37 6.6723e-05 1024340000.0 284809.0 289698.0 284269.0 222431.0 302254.0 285545.0 236339.0 272574.0 427220.0 209743.0 True False 269010.07701733435 275780.47323443677 302593.4345864817 243570.77536368102 326039.6702099882 283762.80773746 260230.45256636315 271628.50441325014 349647.6173397879 207884.8401975848 1.2940341237083612 1.3266021368961793 1.4555820150179342 1.1716620371749014 1.5683667452619574 1.3650000041742185 1.2518010082843285 1.3066296905300068 1.681929365351818 1.0 17.665425029318012 -10.072929537570262 5.337010562665982 0.9999957840354309 1.3738372063689843 0.3836432998949614 0.14436308270170387 6.961289042096171e-06 1.2094877892511195e-06 0.13436294234604923 0.03258743269739064 8.45415999178335e-11 10.072929537570262 0.37384142233355344 SGS(ph)S(ph)PGLR ddPTM_KYSE-520_SHP099_60min_R1 3 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.081)GS(0.945)S(0.974)PGLR;S(0.099)GS(0.939)S(0.962)PGLR;S(0.164)GS(0.872)S(0.964)PGLR 83.99799999999999 0.016346 2263440000.0 4679800.0 4269540.0 4135830.0 4357780.0 4446250.0 4782330.0 4699300.0 4277100.0 5469400.0 4553190.0 True False 4420202.16504999 4064424.8896898045 4402432.2193619665 4771942.100985669 4796144.579298073 4752481.704554761 5174351.104748317 4262263.738382648 4476294.832353907 4512852.278928213 0.9794697215526348 0.9006332666078518 0.9755320908504298 1.0574115450814154 1.0627745565022442 1.0530993284990615 1.1465810943798957 0.9444722483570681 0.9918992592013253 1.0 22.105608124310276 -5.084870037030843 4.22384412949955 1.0402719594230592 0.9392111790426269 0.3542380971515223 0.05350602689930726 0.23585549421893862 7.585612494382815 0.015327297985618956 0.028569457203132056 8.224887435341124e-06 5.084870037030843 -0.10106078038043231 SGS(ph)S(ph)SPDSEITELKFPSINHD ddPTM_KYSE-520_SHP099_60min_R1 1 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 2 S(0.096)GS(0.648)S(0.62)S(0.62)PDS(0.014)EIT(0.003)ELKFPSINHD 66.20100000000001 0.017504 54412000.0 156250.0 174400.0 190680.0 312320.0 136000.0 156130.0 126890.0 119320.0 201070.0 150460.0 True False 147582.50102334714 166021.5622202632 202971.53789878733 342002.79889756837 146702.42626585084 155155.53475651718 139717.27952706008 118906.10676949736 164560.75656221897 149127.04145610856 0.9896427876682847 1.1132894517264804 1.3610646058349276 2.2933654121893614 0.983741277459921 1.0404252189377936 0.9369010352705348 0.7973477218381892 1.103493738998724 1.0 17.186182362087038 -5.943536379480128 24.99998797428596 0.9662572101721673 1.4389719501061136 0.31812026082269496 0.3314949603038155 108.3547233171731 47974.68645439775 0.10885486792436584 0.12342980570118105 1.1388423806427155e-06 5.943536379480128 0.4727147399339463 SGS(ph)SQELDVKPSASPQER ddPTM_KYSE-520_SHP099_60min_R1 2 SGSSQELDVKPSASPQER 18 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SGS(0.877)S(0.123)QELDVKPSASPQER;S(0.005)GS(0.853)S(0.142)QELDVKPSASPQER 207.17 3.5747e-14 1161730000.0 1001200.0 993840.0 970110.0 1000560.0 1007130.0 1051760.0 1004230.0 1106550.0 1267660.0 1126200.0 True False 945661.4401572818 946094.4346157471 1032644.8428308817 1095652.9215706673 1086385.4012141621 1045195.5757094383 1105747.3687403228 1102711.6363207113 1037484.8991080836 1116222.7441703405 0.8471977883412217 0.8475856987835834 0.9251243519486068 0.981571937404875 0.9732693648180806 0.9363682841692186 0.9906153359759715 0.9878956884544835 0.9294604544895018 1.0 20.090193517499017 -4.898637452184043 2.7945985314691093 0.9700109811373161 0.8442966463900661 0.8372452564743245 0.02163249295341648 0.09454672459908753 1.4721620668047148 0.005852424998776989 0.014949043533749502 1.2628813444766093e-05 4.898637452184043 -0.12571433474725002 SGS(ph)SS(ph)PDSEITELK ddPTM_KYSE-520_SHP099_60min_R1 2 SGSSSPDSEITELK 14 0 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 2 S(0.019)GS(0.76)S(0.221)S(1)PDSEITELK;S(0.059)GS(0.825)S(0.125)S(0.991)PDSEITELK 214.61 8.7662e-14 1012760000.0 2523000.0 2040200.0 1829840.0 2244900.0 2232700.0 2218000.0 2267000.0 2461300.0 2293700.0 2334900.0 True False 2383044.160524194 1942185.729597367 1947794.414247516 2458254.6210462055 2408400.7876747423 2204156.6392746763 2496170.4837878896 2452762.3247717414 1877221.899471631 2314214.602524713 1.0297420809307791 0.8392418436382357 0.8416654238213485 1.0622414266872011 1.0406989848941735 0.9524426286438742 1.078625327601282 1.0598681393228953 0.8111701902769342 1.0 21.14209122445345 -5.261225098826955 24.999483715483414 1.0061156317961564 0.8971189900077606 0.20118613645079564 0.08799362022703994 27.790121687861085 3242009.396970432 0.024114892585120562 0.038601434928170135 5.479928615569789e-06 5.261225098826955 -0.10899664178839574 SGS(ph)SS(ph)PDSEITELKFPSINHD ddPTM_KYSE-520_SHP099_60min_R1 4 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 2 S(0.128)GS(0.748)S(0.321)S(0.802)PDSEITELKFPSINHD;S(0.148)GS(0.466)S(0.43)S(0.641)PDS(0.288)EIT(0.028)ELKFPSINHD;S(0.171)GS(0.664)S(0.393)S(0.759)PDS(0.009)EIT(0.004)ELKFPSINHD;S(0.096)GS(0.599)S(0.373)S(0.931)PDS(0.001)EITELKFPSINHD 119.48 6.238600000000001e-05 555570000.0 521723.0 805090.0 856750.0 1468470.0 650009.0 569257.0 547000.0 543062.0 785490.0 572171.0 True False 492781.98516098416 766412.2679352725 911977.4758484687 1608032.9472883947 701161.0102547013 565704.0559078379 602296.0982055467 541178.2446736231 642864.8165915215 567102.0100823017 0.868947696181624 1.3514539788424407 1.6081365603273323 2.835526798882314 1.2363930964606245 0.9975349158535677 1.0620595369043702 0.9542872976152627 1.1335964344372975 1.0 19.1132487443533 -5.985630573757472 24.999149575103402 1.0384836196515135 1.688981531677548 0.29799582400583136 0.46123002686564796 315.4012263466886 548714.8785872888 0.152199297922419 0.1725093152009059 1.0336402828795357e-06 5.985630573757472 0.6504979120260346 SGS(ph)VSNYR ddPTM_KYSE-520_SHP099_60min_R1 8 SGSVSNYR 8 0 Q13131;Q13131-2 Q13131 PRKAA1 5-AMP-activated protein kinase catalytic subunit alpha-1 1 S(0.156)GS(0.827)VS(0.018)NYR;S(0.017)GS(0.915)VS(0.067)NYR;S(0.003)GS(0.981)VS(0.016)NYR;S(0.007)GS(0.964)VS(0.029)NYR;S(0.017)GS(0.965)VS(0.017)NYR;S(0.026)GS(0.901)VS(0.073)NYR;S(0.009)GS(0.954)VS(0.037)NYR;S(0.066)GS(0.868)VS(0.066)NYR 126.49 0.00085996 10303100000.0 6765460.0 5586550.0 5540010.0 5508370.0 5671520.0 6204110.0 5740620.0 6339830.0 7317580.0 6825830.0 True False 6390166.447189855 5318163.752417496 5897127.908929404 6031883.828648169 6117836.3574654255 6165387.8481922485 6320937.892652161 6317838.6094574435 5988891.933180295 6765358.456615382 0.9445421832661872 0.7860875054177251 0.8716652556913678 0.8915837745079127 0.9042885749066571 0.9113172476712652 0.9343093840757762 0.9338512733615262 0.8852290638531011 1.0 22.68973494548917 -5.871192393802256 1.11135624014102 0.9325678748359065 0.860142629626383 0.2937565557133537 0.04456893033751306 0.6083861506532654 1.6017650520128663 0.0192585090334119 0.025580304928247387 1.3452642657897317e-06 5.871192393802256 -0.07242524520952354 SGS(ph)VYEPLK ddPTM_KYSE-520_SHP099_60min_R1 1 SGSVYEPLK 9 0 Q93100-4;Q93100-2;Q93100-3;Q93100;I3L3F2;H3BV13;H3BQ89 Q93100-4 PHKB Phosphorylase b kinase regulatory subunit beta 1 S(0.002)GS(0.998)VYEPLK 101.95 0.0021976999999999995 708200000.0 1219000.0 968270.0 708300.0 773880.0 748450.0 754510.0 854240.0 841470.0 787430.0 975740.0 True False 1151379.6399837446 921752.8557970995 753958.1513200692 847429.3225244944 807348.7569020286 749800.8232187264 940594.9157789892 838551.1369705742 644452.5614949415 967095.7027142341 1.190553982147064 0.9531144158847195 0.7796106933409209 0.8762621115429567 0.8348178516729394 0.7753119170257384 0.9725975548636311 0.8670818561359657 0.666379304226285 1.0 19.883299138698785 -4.343934503909263 2.824774752136905 0.8446031316349384 1.2227417739942588 0.5633231820781688 0.09164108143676092 0.2394839510234954 2.914295305525191 0.022776665938697337 0.18848032847403143 4.529658866841154e-05 4.343934503909263 0.3781386423593204 SGS(ph)YSLPR ddPTM_KYSE-520_SHP099_60min_R1 4 SGSYSLPR 8 0 Q9BW04 Q9BW04 SARG Specifically androgen-regulated gene protein 1 S(0.012)GS(0.988)YSLPR;S(0.442)GS(0.556)YS(0.001)LPR;S(0.012)GS(0.981)YS(0.008)LPR;S(0.012)GS(0.976)YS(0.011)LPR 169.65 0.00013617 1757660000.0 3835010.0 3815770.0 4160550.0 4598760.0 4396540.0 4549670.0 4220290.0 4783700.0 5629400.0 4941180.0 True False 3622274.350397102 3632454.6816124655 4428745.710115374 5035824.767732395 4742522.6851092875 4521273.8219155995 4646918.099261217 4767106.461223972 4607242.86562567 4897404.98937987 0.7396313676839231 0.741710087176683 0.9043045694034303 1.0282639027510878 0.9683746178626338 0.9231978633010913 0.9488531394357136 0.9733943734613631 0.9407518625918374 1.0 22.22358607352095 -4.843137183358133 3.5634445865226008 0.9652743184740749 0.7363988455532973 0.907443252747021 0.028709621012403992 0.06041496772165222 1.4895264638192727 0.007912608283072532 0.019393366628495164 1.4350360677906715e-05 4.843137183358133 -0.2288754729207776 SGSALLQS(ph)QSSTEDPKDEPAELKPDSEDLSSQSSASK ddPTM_KYSE-520_SHP099_60min_R1 2 SGSALLQSQSSTEDPKDEPAELKPDSEDLSSQSSASK 37 2 Q5VTR2 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A 1 SGSALLQS(0.418)QS(0.259)S(0.259)T(0.063)EDPKDEPAELKPDSEDLSSQSSASK;S(0.001)GSALLQS(0.355)QS(0.285)S(0.285)T(0.074)EDPKDEPAELKPDSEDLSSQSSASK 125.05 3.6883e-05 1782690000.0 1239550.0 1364030.0 1071590.0 990610.0 1049790.0 1299410.0 1209040.0 1459770.0 1739640.0 1219500.0 True False 1170789.690518335 1298499.9513492282 1140666.4060046214 1084757.276562242 1132402.5005119664 1291299.900198334 1331261.5622932978 1454706.39858288 1423765.2287556499 1208696.1787566424 0.9686385305881409 1.0742980528696342 0.9437163995819019 0.8974606651591359 0.9368793584479125 1.0683411786133585 1.1014029709788076 1.2035335464362125 1.1779347480193443 1.0 20.205020219630534 -6.541013892515742 2.5456993150533584 1.1394613327180192 0.9660806799781808 0.5471228628030087 0.06674074282943343 0.2130984214657841 2.7904610877665763 0.029075686575362178 0.022504308572522662 2.877306371974176e-07 6.541013892515742 -0.17338065273983838 SGSALLQSQS(ph)S(ph)TEDPKDEPAELKPDSEDLSSQSSASK ddPTM_KYSE-520_SHP099_60min_R1 1 SGSALLQSQSSTEDPKDEPAELKPDSEDLSSQSSASK 37 2 Q5VTR2 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A 2 SGSALLQS(0.057)QS(0.935)S(0.548)T(0.46)EDPKDEPAELKPDSEDLSSQSSASK 167.35 1.7184000000000002e-10 654220000.0 423470.0 399010.0 357290.0 408830.0 411670.0 397970.0 416480.0 414330.0 543250.0 415940.0 True False 399979.2749334835 379840.96067377966 380321.48508421256 447685.0802807789 444066.08691810875 395486.12161052413 458581.8628531015 412892.78593534866 444609.4942180607 412255.0951964231 0.9702227567203489 0.9213735987733531 0.9225391984615849 1.0859418973766104 1.0771633682454038 0.959323793007557 1.1123740329627838 1.0015468353123003 1.0784815018628744 1.0 18.653177798952644 -5.252837101913842 24.97417915962618 1.0456209301429726 0.9363780182369693 0.5311010635496904 0.046032168755419184 465.54033623711246 1351556.6685151095 0.011968803258816649 0.020335493012772512 5.586797087724477e-06 5.252837101913842 -0.10924291190600333 SGSALLQSQS(ph)STEDPKDEPAELKPDSEDLSSQSSASK ddPTM_KYSE-520_SHP099_60min_R1 2 SGSALLQSQSSTEDPKDEPAELKPDSEDLSSQSSASK 37 2 Q5VTR2 Q5VTR2 RNF20 E3 ubiquitin-protein ligase BRE1A 1 SGSALLQS(0.001)QS(0.492)S(0.492)T(0.015)EDPKDEPAELKPDSEDLSSQSSASK;SGSALLQS(0.019)QS(0.574)S(0.393)T(0.013)EDPKDEPAELKPDSEDLSSQSSASK 273.1 4.2671e-42 6787000000.0 4443300.0 4429500.0 3583650.0 3547950.0 3804970.0 4577400.0 4081500.0 4805000.0 5484800.0 4435000.0 True False 4196821.291501042 4216700.171184947 3814657.8130427357 3885146.101269932 4104399.4916821616 4548830.74869968 4494097.851601359 4788332.576495432 4488898.580556315 4395709.350377791 0.9547540469527052 0.9592763840999954 0.8678139314909171 0.8838496341747486 0.9337285895231922 1.0348342863726259 1.0223828495883407 1.089319651237609 1.0212000436676996 1.0 22.067664566022778 -6.230744161630163 3.898077492143825 1.0395367725746383 0.915307521885533 0.73846893922841 0.03383835487075209 0.1182434327059334 3.9979863331569874 0.012529257401948388 0.012022025146620298 5.878355383644454e-07 6.230744161630163 -0.12422925068910529 SGSIVELIAGGGSSCS(ph)PVLSR ddPTM_KYSE-520_SHP099_60min_R1 2 SGSIVELIAGGGSSCSPVLSR 21 0 P42858 P42858 HTT Huntingtin 1 SGSIVELIAGGGSSCS(1)PVLSR;SGSIVELIAGGGSS(0.001)CS(0.998)PVLS(0.001)R 378.04 2.7961999999999996e-79 1937100000.0 2020500.0 2988400.0 2054670.0 1790520.0 1988090.0 2794200.0 1939290.0 2158010.0 3084100.0 2158370.0 True False 1908418.8372331061 2844832.7783201532 2187117.3157882374 1960690.4824605333 2144541.3723152573 2776760.3613441396 2135332.3588464987 2150524.366993321 2524105.1838341854 2139248.520986448 0.8920977710215259 1.3298280916928469 1.0223764533817306 0.9165323538736966 1.00247416383692 1.2980073769380112 0.9981693748521824 1.0052709378532951 1.179902736438622 1.0 21.02867266247123 -10.137611556791983 4.263333052952178 0.9999844776653126 1.0737246038888455 0.022057845216127747 0.14246789788389783 94769097.96258822 1.3668959592084988 14440.930773481465 0.03378522026689713 7.284310391224805e-11 10.137611556791983 0.07374012622353288 SGSLDDS(ph)FSDFQELPASSK ddPTM_KYSE-520_SHP099_60min_R1 8 SGSLDDSFSDFQELPASSK 19 0 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 S(0.002)GS(0.002)LDDS(0.995)FS(0.001)DFQELPASSK;SGSLDDS(0.979)FS(0.02)DFQELPASSK;S(0.001)GS(0.001)LDDS(0.994)FS(0.005)DFQELPASSK;S(0.008)GS(0.008)LDDS(0.983)FS(0.001)DFQELPASSK;SGSLDDS(0.987)FS(0.013)DFQELPASSK;SGSLDDS(1)FSDFQELPASSK;SGSLDDS(0.992)FS(0.008)DFQELPASSK;SGSLDDS(1)FSDFQELPASSK 378.57 4.4386999999999996e-79 2231997000.0 2794098.0 2631241.0 2426042.0 2179599.0 2185449.0 2604918.0 2265982.0 2752553.0 3282900.0 2728300.0 True False 2639103.8140437254 2504832.23278674 2582428.5491244476 2386747.433639665 2357431.4027961553 2588659.7405167297 2495049.5744131645 2743005.0360937 2686808.115174356 2704129.384585279 0.9759532325219984 0.9262989585725373 0.9549944480635507 0.8826306341867997 0.8717894255484024 0.9572987724896682 0.9226812846441591 1.0143764021536947 0.9935945115978319 1.0 21.366732751282235 -7.257632743299726 24.828645894829634 1.0029890955115495 0.9256904787295679 0.5588030159911197 0.030626646584125148 223.9697616778178 1460847.7334699703 0.01588547556647409 0.008698570395350743 5.5254449539073215e-08 7.257632743299726 -0.07729861678198158 SGSLDSELSVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 SGSLDSELSVSPK 13 0 Q12802-2;Q12802;Q12802-4;A8MYJ1;A0A087WTD7 Q12802-2 AKAP13 A-kinase anchor protein 13 1 SGSLDSELSVS(1)PK;SGSLDSELSVS(1)PK;SGSLDSELS(0.001)VS(0.999)PK;SGSLDSELSVS(1)PK;SGSLDSELSVS(1)PK;SGSLDSELSVS(1)PK;SGSLDSELSVS(1)PK 232.22 1.0444000000000001e-13 13619290000.0 19852300.0 20106600.0 15912300.0 14405180.0 15087100.0 18255800.0 15553050.0 19068600.0 21891700.0 19015900.0 True False 18751053.344421078 19140648.7553781 16938032.318580188 15774243.976124726 16274368.93614348 18141858.780554846 17125304.07714038 19002455.477244675 17916719.124847706 18847433.92014633 0.9948862759708508 1.0155572815097311 0.8986916940706102 0.8369438536279137 0.8634792940564466 0.9625638618720778 0.908627888003091 1.0082250749759964 0.9506184874162753 1.0 24.16786477801388 -7.256465804696302 24.48190440560151 0.9845663365596338 0.9238264003139838 0.20868835972388577 0.053822060509783706 559.9708459241806 2756413.917937074 0.029462832067485054 0.016335615716370294 5.540311653036181e-08 7.256465804696302 -0.060739936245649995 SGSLDSELSVS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 6 SGSLDSELSVSPKR 14 1 Q12802-2;Q12802;Q12802-4;A8MYJ1;A0A087WTD7 Q12802-2 AKAP13 A-kinase anchor protein 13 1 SGSLDSELSVS(1)PKR;SGSLDSELSVS(1)PKR;SGSLDSELSVS(1)PKR;SGSLDSELSVS(1)PKR;SGSLDSELSVS(1)PKR;SGSLDSELSVS(1)PKR 182.31 1.126e-09 5914780000.0 5286990.0 5287970.0 4841500.0 3797680.0 4110660.0 4122200.0 3648130.0 3949870.0 6714310.0 4280890.0 True False 4993710.125346734 5033927.983795209 5153590.8366738865 4158610.365385873 4434145.5555439815 4096471.8207475464 4016918.582717737 3936168.8228765903 5495160.55798116 4242964.645082027 1.1769388960463973 1.186417612418708 1.2146202638401327 0.9801190236656985 1.0450583321931637 0.9654739465000542 0.9467245001378229 0.9276930524130009 1.2951228722470123 1.0 22.016641226605348 -5.258971517208008 24.976104451052368 1.0152302068532517 1.1920348018930893 0.38435219808205523 0.09813021679079667 214.31209728008048 2168941.665943534 0.02668729096241707 0.04352631859161111 5.508438217907547e-06 5.258971517208008 0.1768045950398376 SGSPS(ph)DNS(ph)GAEEMEVSLAKPK ddPTM_KYSE-520_SHP099_60min_R1 1 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 2 S(0.003)GS(0.221)PS(0.776)DNS(1)GAEEMEVSLAKPK 176.28 1.1399000000000002e-09 1250900000.0 2152900.0 1879900.0 1717100.0 1755600.0 1974500.0 1781900.0 1720800.0 1891400.0 2249500.0 1844400.0 True False 2033474.3453002493 1789586.7822125708 1827787.0134571407 1922451.696159614 2129881.916631782 1770778.501137758 1894755.2573895915 1884839.1748560797 1841047.5052803082 1828060.050921485 1.1123673668571332 0.9789540454704861 0.9998506408669634 1.0516348711797232 1.165105006018897 0.9686653894357284 1.036484144180322 1.0310597695660892 1.0071045009447455 1.0 20.801882032358915 SGSPS(ph)DNSGAEEMEVSLAKPK ddPTM_KYSE-520_SHP099_60min_R1 1 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 S(0.006)GS(0.031)PS(0.95)DNS(0.013)GAEEMEVSLAKPK 151.02 4.7015e-07 2172700000.0 806060.0 753360.0 700160.0 638640.0 706490.0 796770.0 675230.0 745610.0 924280.0 688730.0 True False 761346.2449592269 717167.4547835867 745293.4338956093 699336.1535858819 762086.7436217712 791797.0628831745 743488.8380097479 743023.6529366823 756454.051202704 682628.388023832 1.1153158267608507 1.0505971731702268 1.0917996481997898 1.0244756383636753 1.1164006024243533 1.1599240183599444 1.0891560489626035 1.0884745873046549 1.10814912545989 1.0 19.380740886543677 -4.036143216399889 24.783287502092247 1.0859727622289372 1.1190458749083252 0.04144797543570278 0.04400161617719598 9971.397008373284 110.25653526406252 0.010559448578620022 2122.6374675314873 9.20146087029674e-05 4.036143216399889 0.03307311267938795 SGSPSDNS(ph)GAEEMEVSLAKPK ddPTM_KYSE-520_SHP099_60min_R1 1 SGSPSDNSGAEEMEVSLAKPK 21 1 P31749-2;P31749 P31749-2 AKT1 RAC-alpha serine/threonine-protein kinase 1 SGSPSDNS(1)GAEEMEVSLAKPK 211.44 4.4743e-19 2830600000.0 1061300.0 1064600.0 820900.0 855400.0 909360.0 900500.0 903180.0 917500.0 1131200.0 813630.0 True False 1002427.5733509023 1013455.0180028216 873816.5274864401 936696.9588146127 980921.4584493664 894879.6454764848 994482.2485873591 914317.4066461108 925802.5952314221 806421.8711945612 1.2430560345120547 1.2567305701934646 1.0835724559305993 1.1615470664592387 1.2163874685049365 1.1096916855080954 1.2332034684453956 1.1337953982965798 1.1480375573891874 1.0 19.621175241543543 -13.999999999962414 0.16904777192226136 0.3179436982544019 1.2171485092727707 0.5234079622939657 0.05328645619535514 111.79507097465505 1.051424089204705 25.52777433472262 0.20006195155034542 1.0000000000865448e-14 13.999999999962414 0.8992048110183688 SGSRDS(ph)TPSRPAQQPLSR ddPTM_KYSE-520_SHP099_60min_R1 1 SGSRDSTPSRPAQQPLSR 18 2 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.011)GS(0.039)RDS(0.456)T(0.456)PS(0.038)RPAQQPLSR 78.354 0.0060742 547920000.0 270180.0 331300.0 316480.0 227960.0 260270.0 268860.0 243720.0 306650.0 408620.0 207210.0 True False 255192.57680952287 315383.8507085614 336880.8071859039 249625.24986132662 280751.76826627203 267181.94501144654 268357.59607798175 305586.30272264796 334424.90847194404 205374.28060694056 1.2425731988219497 1.5356540739985098 1.6403261702990433 1.2154649994323126 1.3670249626027617 1.3009513373429547 1.3066757691611006 1.4879482563228064 1.6283680092931863 1.0 17.64789599609242 -11.140693786605647 2.568715258905825 0.051508758909573474 1.4126178191846357 0.42013367330700835 0.14586571823379277 88357939.19955502 74468497.17732283 472788138.0028584 0.03720761268049287 7.2327959556940574e-12 11.140693786605647 1.3611090602750622 SGSS(ph)LEWNK ddPTM_KYSE-520_SHP099_60min_R1 2 SGSSLEWNK 9 0 Q9C0D5;Q9C0D5-2 Q9C0D5 TANC1 Protein TANC1 1 SGS(0.019)S(0.981)LEWNK;SGS(0.007)S(0.993)LEWNK 179.46 2.9118e-05 624090000.0 2167570.0 1670240.0 1467110.0 1640110.0 1859370.0 1535310.0 1672770.0 1616530.0 1858400.0 1620050.0 True False 2047330.571156332 1589999.1633186473 1561682.258058998 1795985.561282949 2005691.8406318722 1525727.5607956715 1841869.9162619598 1610922.6347309377 1520961.40645162 1605697.6173798293 1.2750411715109584 0.9902232812135583 0.972588014801532 1.1185079568179412 1.2491093085787546 0.9501960669813706 1.147083919366783 1.0032540481436565 0.9472277905808433 1.0 20.614768801543917 -7.432819392886482 5.608517960784602 0.9738400141814672 1.0915894952626946 0.2096407906109773 0.10399373851695468 0.37083293358461483 17.937686081007577 0.05926727808817512 0.027347323816863174 3.691310747027932e-08 7.432819392886482 0.1177494810812274 SGSS(ph)PGLR ddPTM_KYSE-520_SHP099_60min_R1 2 SGSSPGLR 8 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.016)GS(0.115)S(0.87)PGLR;S(0.017)GS(0.278)S(0.705)PGLR 119.21 0.0015780999999999998 3997900000.0 4787300.0 4068500.0 3880100.0 3625300.0 3829000.0 3958700.0 3811400.0 3264400.0 4049600.0 3773300.0 True False 4521738.925754052 3873043.1530570006 4130217.454379506 3969847.422013807 4130320.515970165 3933992.284894794 4196693.507679381 3253076.558316685 3314294.7221085285 3739871.4975829753 1.2090626452476738 1.0356086179859634 1.1043741628686454 1.0614930017193003 1.1044017203905352 1.0519057372525438 1.1221491193993278 0.8698364530490155 0.8862055084647986 1.0 21.834557269120307 -7.259596337714257 24.998774047988128 0.9085157289270583 1.0932603206917042 0.685512127319851 0.05558658441042828 84.58574196058275 1147329.1544612201 0.02590188478220989 0.013973014497194392 5.500518912841687e-08 7.259596337714257 0.18474459176464586 SGSS(ph)S(ph)PDSEITELK ddPTM_KYSE-520_SHP099_60min_R1 2 SGSSSPDSEITELK 14 0 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 2 S(0.087)GS(0.288)S(0.627)S(0.996)PDS(0.001)EITELK;S(0.01)GS(0.106)S(0.885)S(0.999)PDSEITELK 145.52 4.4662e-06 800770000.0 2441290.0 2124760.0 1837860.0 2106480.0 2230250.0 2205340.0 2318470.0 2254350.0 2322810.0 2215270.0 True False 2305866.777109041 2022683.3402702208 1956331.3962799693 2306679.2258636924 2405757.9866133365 2191575.655030661 2552843.5736866836 2246530.186019248 1901046.2572750147 2195644.431253979 1.0502004533548774 0.9212253639424774 0.8910055601136961 1.0505704808252123 1.0956956200960815 0.9981468874625595 1.1626853316266244 1.023175772015238 0.8658261010819893 1.0 21.066213008548516 -5.28268799275565 24.274080701694757 1.036166847693787 0.9508519417301877 0.14238206927640418 0.08125627220120626 935.6910138886515 1068916.4792807153 0.023390197144959983 0.03473752735938194 5.215692840275926e-06 5.28268799275565 -0.08531490596359936 SGSS(ph)S(ph)PDSEITELKFPSINHD ddPTM_KYSE-520_SHP099_60min_R1 2 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 2 S(0.099)GS(0.488)S(0.543)S(0.861)PDS(0.008)EITELKFPSINHD;S(0.333)GS(0.413)S(0.477)S(0.771)PDS(0.005)EITELKFPSINHD 83.992 0.0023674 279930000.0 152938.0 200151.0 276070.0 532530.0 197694.0 169155.0 149774.0 157730.0 205060.0 179180.0 True False 144454.2242656557 190535.44552722425 293865.9139276176 583141.4910890176 213251.39307500824 168099.24090013874 164914.61757337765 157182.87144445878 167826.2731419337 177592.6045999306 0.8134022505670946 1.072879391326291 1.6547193200393684 3.2835910729654643 1.2007898276812117 0.9465441496216697 0.9286119652610922 0.8850755457894793 0.94500710499743 1.0 17.43821197994718 -5.9871029441724355 24.995246481419482 0.9487073538874523 1.730359582263838 0.26067359944559254 0.6081482221574589 343.9725382138799 666634.9068326489 0.20474316889214808 0.23202722499032374 1.030141909012945e-06 5.9871029441724355 0.7816522283763857 SGSS(ph)SPDSEITELK ddPTM_KYSE-520_SHP099_60min_R1 1 SGSSSPDSEITELK 14 0 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 S(0.001)GS(0.099)S(0.53)S(0.361)PDS(0.008)EITELK 109.6 0.0011431 1173700000.0 3598800.0 3414500.0 3028700.0 2791600.0 2858700.0 4116600.0 3364800.0 3928300.0 4444900.0 4219600.0 True False 3399167.389970062 3250462.2947310116 3223934.848091338 3056912.8246748517 3083663.42622197 4090906.7724247673 3704946.8212834066 3914673.644172116 3637818.2068105997 4182217.626799129 0.8127667408287462 0.7772102230889313 0.7708673091119805 0.7309310747213478 0.7373273467316094 0.9781668811806318 0.885880925359448 0.9360282016620503 0.8698299637732657 1.0 21.995836705602418 -6.256320574909858 24.999191907165393 0.9269766917082553 0.7647953670464158 0.802078537855915 0.0416928276367896 189.93260609535557 927592.5874416146 0.013706349348555275 0.013314651513568086 5.54216466489909e-07 6.256320574909858 -0.16218132466183943 SGSS(ph)SPDSEITELKFPSINHD ddPTM_KYSE-520_SHP099_60min_R1 2 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 S(0.056)GS(0.056)S(0.48)S(0.407)PDS(0.001)EITELKFPSINHD;S(0.007)GS(0.027)S(0.361)S(0.282)PDS(0.234)EIT(0.088)ELKFPSINHD 124.86 3.9814e-05 2307620000.0 523460.0 741260.0 904990.0 1698200.0 621960.0 621410.0 544360.0 563420.0 752590.0 608910.0 True False 494422.63030836114 705648.7569460559 963327.1034351974 1859596.4174175516 670904.7135316796 617531.5496896645 599389.2212416304 561465.627523216 615938.627250013 603515.5311248121 0.8192376248990192 1.1692304846420296 1.5961927303507508 3.081273507496481 1.111661057473152 1.0232239567036987 0.99316287705887 0.9303250679842076 1.0205845508267986 1.0 19.203031372821304 -5.971930164271245 24.999993251521307 0.9977910835677443 1.684759901378506 0.2577923381840812 0.5457781713103566 316.7788364464651 282133.07097477966 0.1815019747354726 0.20580035510593062 1.0667676465653825e-06 5.971930164271245 0.6869688178107617 SGSSS(ph)PDSEITELK ddPTM_KYSE-520_SHP099_60min_R1 4 SGSSSPDSEITELK 14 0 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 S(0.001)GS(0.001)S(0.078)S(0.92)PDSEITELK;SGS(0.001)S(0.01)S(0.989)PDSEITELK;S(0.017)GS(0.017)S(0.116)S(0.85)PDSEITELK;S(0.001)GS(0.005)S(0.032)S(0.96)PDS(0.003)EITELK 183.28 2.5323e-08 9149600000.0 12307700.0 11673400.0 9268600.0 9814840.0 10033390.0 13263700.0 11409200.0 14135700.0 14162500.0 14158400.0 True False 11624967.346208319 11112592.341869364 9866068.786284344 10747639.442660745 10822960.710820027 13180916.328380287 12562553.279061666 14086666.555997198 11590947.007571625 14032967.591068534 0.8284040614194236 0.7918918268536527 0.7030636052037726 0.7658850042168714 0.7712524553757568 0.9392821755513391 0.895217151862965 1.0038266292984843 0.8259797460765772 1.0 23.74231679620525 -6.259051766033049 24.257846925829345 0.9307475619511906 0.7690183952334271 0.6765044000574839 0.05555419931150224 82.5266702478475 838462.588673396 0.018128150127754334 0.017318072902904113 5.507420464113323e-07 6.259051766033049 -0.1617291667177635 SGSSS(ph)PDSEITELKFPSINHD ddPTM_KYSE-520_SHP099_60min_R1 6 SGSSSPDSEITELKFPSINHD 21 1 B4E1E0;P17812-2;P17812 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 1 S(0.009)GS(0.036)S(0.145)S(0.807)PDS(0.002)EITELKFPSINHD;S(0.004)GS(0.019)S(0.107)S(0.863)PDS(0.007)EITELKFPSINHD;S(0.001)GS(0.003)S(0.026)S(0.917)PDS(0.054)EITELKFPSINHD;S(0.012)GS(0.04)S(0.144)S(0.658)PDS(0.144)EIT(0.002)ELKFPSINHD;S(0.001)GS(0.004)S(0.029)S(0.963)PDS(0.004)EITELKFPSINHD;S(0.03)GS(0.031)S(0.168)S(0.735)PDS(0.031)EIT(0.004)ELKFPSINHD 266.63 8.8649e-36 8151990000.0 2026170.0 3224010.0 3955300.0 8020100.0 2416080.0 2766110.0 2195550.0 2067210.0 2989550.0 2485070.0 True False 1913774.311030244 3069123.720262332 4210264.96670376 8782327.892669016 2606211.7503852667 2748845.681453594 2417497.6205030903 2060039.33100044 2446723.080422643 2463054.213155207 0.7769923620879916 1.2460642172917262 1.709367558463259 3.5656250868383164 1.0581219595027398 1.116031334906057 0.9815040235782069 0.8363759595699278 0.9933695601804705 1.0 21.232016952008554 -5.9582228294719 24.9999934140201 0.9874305816474835 1.8420827132729678 0.2668628367117062 0.6721198682933608 210.75909309952547 126120.0203064977 0.22215669758779263 0.25190181254581084 1.1009742725123645e-06 5.9582228294719 0.8546521316254843 SGSYS(ph)GRSPS(ph)PYGR ddPTM_KYSE-520_SHP099_60min_R1 1 SGSYSGRSPSPYGR 14 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 S(0.01)GS(0.153)Y(0.004)S(0.699)GRS(0.155)PS(0.803)PY(0.176)GR 75.143 0.052124000000000004 392870000.0 411240.0 390070.0 347550.0 337990.0 316490.0 307590.0 315210.0 320710.0 449200.0 327750.0 True False 388427.6974133846 371330.4516929931 369953.6290996619 370112.4679796013 341395.9624182283 305670.2167152825 347074.5029531453 319597.53186427697 367636.60341049754 324846.3899856413 1.1957273018504337 1.1430955157279306 1.1388571352632684 1.1393461013864457 1.0509458406889438 0.940968488918081 1.068426535287914 0.98384203031594 1.1317244542158762 1.0 18.309398147056104 -5.782537028313051 3.6252895512920973 1.023864498306047 1.1546874115526946 0.6054480854783475 0.04985047307003808 0.1534072244721532 4.274857528285038 0.015216088394814593 0.018515620843698035 1.6499203217277965e-06 5.782537028313051 0.13082291324664763 SGSYS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 2 SGSYSLPR 8 0 Q9BW04 Q9BW04 SARG Specifically androgen-regulated gene protein 1 SGSYS(1)LPR;S(0.001)GS(0.004)YS(0.995)LPR 105.52 0.001779 1117490000.0 869390.0 734180.0 695420.0 676200.0 692300.0 676180.0 686250.0 701910.0 818780.0 696480.0 True False 821163.2036140017 698908.8907733528 740247.8859113419 740465.8446930562 746780.0713518274 671959.7098037639 755622.8471545824 699475.2380370249 670110.1917641287 690309.7290532411 1.189557627617716 1.012456961503216 1.0723416674520738 1.072657408013942 1.0818043552363592 0.9734177015371864 1.094614222214307 1.0132773863644573 0.9707384432828203 1.0 19.396884291847527 SGSYSGRS(ph)PS(ph)PYGR ddPTM_KYSE-520_SHP099_60min_R1 1 SGSYSGRSPSPYGR 14 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 2 S(0.003)GS(0.069)YS(0.214)GRS(0.713)PS(0.999)PY(0.001)GR 140.81 1.8828e-05 378640000.0 439110.0 419930.0 397030.0 379550.0 396240.0 350060.0 353270.0 389140.0 521290.0 404280.0 True False 414751.69295591634 399755.9324722197 422623.1890704608 415622.3178841311 427421.83370279946 347875.1456918363 388981.9791829497 387790.16416595865 426636.87665151013 400698.3937250809 1.035072012892763 0.9976479535041316 1.0547164542926082 1.0372447815932337 1.066692156485293 0.8681720494505236 0.9707600161976946 0.9677856718138517 1.0647331841919627 1.0 18.61215720090254 SGT(ph)FDLLEMDR ddPTM_KYSE-520_SHP099_60min_R1 8 SGTFDLLEMDR 11 0 H0YA31;H0YA26;E9PHT6;Q9NVE7 H0YA31 PANK4 Pantothenate kinase 4 1 S(0.37)GT(0.63)FDLLEMDR;S(0.078)GT(0.922)FDLLEMDR;S(0.116)GT(0.884)FDLLEMDR;S(0.145)GT(0.855)FDLLEMDR;S(0.218)GT(0.782)FDLLEMDR;S(0.051)GT(0.949)FDLLEMDR;S(0.058)GT(0.942)FDLLEMDR;S(0.422)GT(0.578)FDLLEMDR 213.77 5.556399999999999e-09 2059799000.0 2881370.0 2840510.0 2218070.0 2199350.0 2423660.0 3267240.0 2573000.0 2934920.0 3380460.0 3053510.0 True False 2721534.66223131 2704047.6359075652 2361050.3412374775 2408375.562741309 2614388.253260967 3246847.943238858 2833103.950060094 2924739.4475354804 2766653.678461821 3026458.2769948314 0.8992473753623658 0.893469325667556 0.7801364252019093 0.7957735882394992 0.8638441418914798 1.0728209828363688 0.9361120130402948 0.9663901431476682 0.9141555657621728 1.0 21.529199031395724 -6.0749889909936465 8.885662808711114 0.9729720786394397 0.8399464841489671 0.6123416177595393 0.05241610389170743 0.2854881965334486 31.965997523116947 0.017949231386966486 0.0179782724776221 8.41416470587309e-07 6.0749889909936465 -0.13302559449047258 SGT(ph)PPRQGS(ph)ITSPQANEQSVT(ph)PQRR ddPTM_KYSE-520_SHP099_60min_R1 1 SGTPPRQGSITSPQANEQSVTPQRR 25 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.179)GT(0.811)PPRQGS(0.355)IT(0.299)S(0.356)PQANEQS(0.255)VT(0.745)PQRR 61.372 0.026772000000000004 897520000.0 187250.0 211720.0 185980.0 134150.0 140820.0 145180.0 133550.0 163310.0 229600.0 154610.0 True False 176862.8692263792 201548.6534018008 197968.5683785212 146899.57566633172 151901.732843802 144273.87776821328 147050.53732239653 162743.51572684036 187910.4277449913 153240.27568475984 1.1541539483406758 1.3152459593352543 1.291883400064972 0.9586224966635275 0.9912650715683163 0.941487981038406 0.9596076270764704 1.0620152893853456 1.2262469961327505 1.0 17.225436000773772 -5.257877031954703 24.935891766578305 1.015504678995211 1.2599096017485718 0.6060161837602444 0.08631961338051156 204.1637633348533 1429107.9552852549 0.02499736120428083 0.041213555655006416 5.522337790417587e-06 5.257877031954703 0.2444049227533609 SGT(ph)PPRQGSIT(ph)SPQANEQS(ph)VTPQRR ddPTM_KYSE-520_SHP099_60min_R1 1 SGTPPRQGSITSPQANEQSVTPQRR 25 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.208)GT(0.784)PPRQGS(0.058)IT(0.41)S(0.539)PQANEQS(0.665)VT(0.335)PQRR 63.165 0.029312 401370000.0 209870.0 213290.0 208470.0 163320.0 177270.0 167170.0 148110.0 146220.0 258440.0 151510.0 True False 198228.09273452708 203043.22824518307 221908.3097637933 178841.88369605155 191220.14047167168 166126.63002143698 163082.4042143028 145712.79694800454 211513.81074222806 150167.73927299626 1.3200444629066426 1.352109509193997 1.4777362357461934 1.1909474335957562 1.2733769676324722 1.1062737630978674 1.0860015939763763 0.9703335593479709 1.4085169808523799 1.0 17.19621538456006 -5.78435854264314 1.411509016315033 1.1119917968350241 1.3741192595147849 0.42820716543986226 0.12533333488977266 0.3829979337086371 1.5936729464696457 0.04685407819611816 0.06384407574397942 1.643014731345808e-06 5.78435854264314 0.2621274626797607 SGT(ph)PPRQGSIT(ph)SPQANEQSVTPQRR ddPTM_KYSE-520_SHP099_60min_R1 1 SGTPPRQGSITSPQANEQSVTPQRR 25 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.147)GT(0.851)PPRQGS(0.193)IT(0.645)S(0.129)PQANEQS(0.009)VT(0.026)PQRR 59.971000000000004 0.027492000000000003 612300000.0 235220.0 213800.0 230870.0 133480.0 170380.0 146950.0 140210.0 104140.0 269300.0 121220.0 True False 222171.87770055537 203528.7270796576 245752.24960506085 146165.8990677747 183787.9366704093 146032.83054166505 154383.79511773272 103778.76264645866 220401.90850054962 120146.08510773283 1.849181165589689 1.6940104781371534 2.0454453375213952 1.2165681381687168 1.5297039142441469 1.2154605820965374 1.284967337714746 0.8637714874637997 1.834449356405739 1.0 16.87443011426808 -5.269957817341878 24.940196154217226 1.2803610561663827 1.8459921448886973 0.5089784721636583 0.2631592620161804 469.5904809675025 1374861.5714937951 0.07010140439346535 0.1058881296760115 5.370839603506867e-06 5.269957817341878 0.5656310887223146 SGT(ph)PPRQGSITSPQANEQSVT(ph)PQRR ddPTM_KYSE-520_SHP099_60min_R1 1 SGTPPRQGSITSPQANEQSVTPQRR 25 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.46)GT(0.539)PPRQGS(0.158)IT(0.03)S(0.105)PQANEQS(0.147)VT(0.56)PQRR 60.527 0.025671 582500000.0 162520.0 166610.0 189400.0 123210.0 113860.0 130430.0 106990.0 104560.0 208290.0 90808.0 True False 153504.6916244119 158605.80551329165 201609.02705071474 134919.84135556288 122820.13422521896 129615.93798944817 117805.5933217759 104197.30576448739 170469.78656360734 90003.51176755488 1.7055411351154455 1.7622179668156794 2.24001289606782 1.4990508559711528 1.364614911276096 1.4401208957734586 1.3088999641038819 1.1577026686868588 1.8940348350391758 1.0 16.457693673333917 -5.456766883466498 7.37227651677356 1.3753114084227542 1.8883535942423777 0.47850208791706694 0.25281756857664006 0.2412559327419158 23.69084688441903 0.06884790061877911 0.1019011798364475 3.493277740610347e-06 5.456766883466498 0.5130421858196235 SGT(ph)PTQDEMMDKPTSSSVDTMSLLSK ddPTM_KYSE-520_SHP099_60min_R1 6 SGTPTQDEMMDKPTSSSVDTMSLLSK 26 1 Q5VT52-2;Q5VT52-3;Q5VT52;Q5VT52-5 Q5VT52-2;Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 S(0.231)GT(0.75)PT(0.019)QDEMMDKPTSSSVDTMSLLSK;S(0.027)GT(0.969)PT(0.004)QDEMMDKPTSSSVDTMSLLSK;S(0.01)GT(0.985)PT(0.005)QDEMMDKPTSSSVDTMSLLSK;S(0.046)GT(0.95)PT(0.004)QDEMMDKPTSSSVDTMSLLSK;S(0.036)GT(0.954)PT(0.01)QDEMMDKPTSSSVDTMSLLSK;S(0.214)GT(0.761)PT(0.025)QDEMMDKPTSSSVDTMSLLSK 301.18 4.6814e-49 6734680000.0 6903810.0 8006360.0 5630580.0 5760330.0 5690160.0 7536410.0 5741940.0 7712310.0 8595270.0 7536750.0 True False 6520841.896895972 7621722.447808637 5993536.196046533 6307790.03129363 6137943.219418326 7489372.469700651 6322391.33113411 7685557.796676693 7034585.637124097 7469980.258502779 0.8729396425744981 1.0203135997760016 0.8023496700977665 0.8444185677885461 0.8216813173544538 1.0025960190692338 0.8463732315674577 1.0288591844574864 0.9417140867429885 1.0 22.832672999621447 -7.262518784081505 24.99707373960455 0.9889649779658103 0.8893605888588569 0.3068185286453472 0.07085594828713647 129.26138721867514 2993367.2074705428 0.03636532797000615 0.01901841214137001 5.463629181113355e-08 7.262518784081505 -0.09960438910695335 SGTGIAAMS(ph)VMR ddPTM_KYSE-520_SHP099_60min_R1 2 SGTGIAAMSVMR 12 0 P27449 P27449 ATP6V0C V-type proton ATPase 16 kDa proteolipid subunit 1 SGTGIAAMS(0.999)VMR;S(0.002)GTGIAAMS(0.997)VMR 50.354 0.043363 1752070000.0 919280.0 871550.0 691150.0 980480.0 638070.0 665400.0 884240.0 893200.0 1007140.0 645590.0 True False 868285.7058607538 829679.4297767797 735702.6348790998 1073664.5244079384 688282.4788783191 661246.9917824024 973627.6085507742 890101.6976744472 824268.7639333231 639870.5748614201 1.35697083124787 1.2966363236135174 1.149767880853772 1.677940143818095 1.075658900282114 1.0334074073114112 1.5216008467988038 1.3910652132538224 1.2881804482286734 1.0 19.287420598474238 SGTHNMYR ddPTM_KYSE-520_SHP099_60min_R1 3 SGTHNMYR 8 0 Q02543;M0R0P7;M0R3D6;M0R1A7;M0R117 Q02543 RPL18A 60S ribosomal protein L18a 0 ;; 130.27 0.0013663 749290000.0 469190.0 523580.0 520470.0 276828.0 440620.0 495650.0 300374.0 401560.0 347460.0 385620.0 False True 443163.095392923 498426.43089039746 554020.3289814445 303137.64988862653 475294.2872151405 492556.4644979674 330738.7352877385 400167.0820848087 284370.0227538099 382203.70680782 1.1594944986123712 1.304085810818723 1.449542008916249 0.793131109115722 1.2435627356542838 1.288727596631173 0.8653467493815826 1.0469994794844337 0.7440273803958607 1.0 18.5439822448174 -6.765239888743768 24.999845090192675 0.9180099846822692 1.2048160520260809 0.4010170839630197 0.17499439002830905 107.40575804313438 706505.9920861633 0.07209871666024122 0.05071451502850819 1.7169597380117444e-07 6.765239888743768 0.28680606734381164 SGTLKS(ph)PPKGFDTTAINK ddPTM_KYSE-520_SHP099_60min_R1 2 SGTLKSPPKGFDTTAINK 18 2 B1ALK7;A0A2R8YG42;Q14155-1;Q14155-5;Q14155-6;Q14155-2;Q14155-3;Q14155;E7EUY6;E7EU80 B1ALK7 ARHGEF7 Rho guanine nucleotide exchange factor 7 1 S(0.008)GT(0.007)LKS(0.474)PPKGFDT(0.436)T(0.076)AINK;SGT(0.007)LKS(0.993)PPKGFDTTAINK 161.66 2.1412e-08 3462600000.0 2124300.0 2096300.0 1569890.0 1395090.0 1440590.0 1765340.0 1444350.0 1918660.0 2304300.0 1868790.0 True False 2006460.8443129351 1995590.60138955 1671087.6213128113 1527678.9341508967 1553956.2371641302 1754321.8582403762 1590358.993497589 1912004.61627861 1885897.2066758866 1852233.974496619 1.083265328214396 1.0773966080240434 0.9022011497046221 0.8247764349350484 0.8389632511661753 0.947138365020622 0.8586166841744711 1.0322694878751668 1.0181743951589142 1.0 20.82083492090566 -10.067587741857537 16.788263933186244 0.999999999984378 0.9479343094003021 0.019103221657563174 0.09177876146942746 0.0 0.0 0.09824852980854731 0.02382876858601682 8.558787784145538e-11 10.067587741857537 -0.05206569058407595 SGTLS(ph)PEIFEK ddPTM_KYSE-520_SHP099_60min_R1 4 SGTLSPEIFEK 11 0 O60673-2;O60673 O60673-2 REV3L DNA polymerase zeta catalytic subunit 1 SGTLS(1)PEIFEK;SGTLS(1)PEIFEK;SGTLS(1)PEIFEK;SGTLS(1)PEIFEK 174.46 8.8976e-06 498060000.0 1047950.0 1079910.0 857070.0 748410.0 826100.0 995110.0 876100.0 1100330.0 1304620.0 1095680.0 True False 989818.1244634665 1028029.5026220427 912318.1035604867 819538.6613823287 891109.3701339641 988899.1493726876 964664.7379120283 1096513.2120489539 1067733.8947938615 1085973.1276261401 0.9114572905014127 0.9466435922491396 0.8400927061194866 0.7546583249014475 0.8205630024030758 0.9106110678211261 0.888295219625477 1.009705658597514 0.9832047107167852 1.0 20.050556973460772 -7.094094504610742 1.8587720314857086 1.001799716010118 0.8575976558871088 0.5698993702817118 0.051686256675892904 0.2995005661370798 1.9861681395919153 0.03850404391140116 0.017970858588558077 8.052032059642493e-08 7.094094504610742 -0.14420206012300918 SGTNS(ph)PPPPFSDWGR ddPTM_KYSE-520_SHP099_60min_R1 10 SGTNSPPPPFSDWGR 15 0 D6RAU6;D6REP2;D6RAJ6;Q9UKT5-2;Q9UKT5 D6RAU6 FBXO4 F-box only protein 4 1 S(0.004)GT(0.111)NS(0.885)PPPPFSDWGR;S(0.004)GT(0.01)NS(0.986)PPPPFSDWGR;SGT(0.001)NS(0.999)PPPPFSDWGR;SGTNS(1)PPPPFSDWGR;S(0.001)GT(0.008)NS(0.991)PPPPFSDWGR;S(0.001)GT(0.004)NS(0.995)PPPPFSDWGR;SGTNS(1)PPPPFSDWGR;SGTNS(0.999)PPPPFSDWGR;S(0.093)GT(0.017)NS(0.889)PPPPFS(0.001)DWGR;S(0.007)GT(0.015)NS(0.978)PPPPFSDWGR 173.28 2.424e-08 4992220000.0 5152770.0 4910840.0 4426380.0 3943680.0 4126030.0 4409650.0 3917240.0 4419060.0 5391600.0 4383220.0 True False 4866935.576307671 4674915.875078883 4711711.537258405 4318486.161489375 4450725.087100649 4382127.738673382 4313232.847778245 4403731.312276362 4412621.3511755075 4344388.080893555 1.1202810351387023 1.0760815534963315 1.0845512531397286 0.9940378440134998 1.0244768662990216 1.0086869904523046 0.9928286256809493 1.0136597445434943 1.0157060716058126 1.0 22.050721553077157 -5.2095726555831465 5.486239210201449 1.0078149411312858 1.0932227753581716 0.890812709638787 0.013897611124194959 0.06327883617306611 4.384412434973141 0.0037663038235794294 0.006556657193927394 6.172020280288426e-06 5.2095726555831465 0.0854078342268858 SGTSSPQS(ph)PVFR ddPTM_KYSE-520_SHP099_60min_R1 5 SGTSSPQSPVFR 12 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 SGTS(0.001)S(0.002)PQS(0.997)PVFR;SGTSSPQS(1)PVFR;SGT(0.001)S(0.003)S(0.014)PQS(0.983)PVFR;SGTSS(0.014)PQS(0.986)PVFR;SGTSSPQS(1)PVFR 227.3 2.9881e-11 11581200000.0 9340800.0 9890000.0 8722900.0 8253100.0 8128400.0 9303200.0 8562000.0 9948600.0 11846700.0 10033800.0 True False 8822647.203576839 9414869.55480734 9285192.091133464 9037472.142615013 8768058.835730454 9245135.277953183 9427530.517067444 9914090.628620699 9695637.91100431 9944908.338178283 0.8871521891968468 0.9467024968610184 0.9336629132606298 0.9087536893548187 0.8816631121747066 0.9296350417289734 0.94797560686159 0.9969011570031998 0.9749348693122663 1.0 23.24552664318208 -6.987474028545748 2.1912876167018225 0.9901647785830103 0.9144739522258779 0.751449289320972 0.01961602109125839 0.16910884812201926 1.6149302527797686 0.011497820591070613 0.0062226245304989256 1.0292620767530344e-07 6.987474028545748 -0.07569082635713242 SGTT(ph)PKPVINS(ph)TPGRT(ph)PLRDK ddPTM_KYSE-520_SHP099_60min_R1 3 SGTTPKPVINSTPGRTPLRDK 21 3 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 3 S(0.228)GT(0.288)T(0.484)PKPVINS(0.504)T(0.504)PGRT(0.993)PLRDK;S(0.312)GT(0.322)T(0.366)PKPVINS(0.547)T(0.547)PGRT(0.906)PLRDK;S(0.296)GT(0.329)T(0.375)PKPVINS(0.571)T(0.441)PGRT(0.988)PLRDK 105.46 0.00040256 2402220000.0 2192650.0 2054410.0 2120340.0 1932740.0 2051890.0 1985680.0 1740550.0 2156690.0 2738770.0 1976540.0 True False 2071019.333560591 1955713.05986772 2257020.509063953 2116427.0285005295 2213362.0693429154 1973286.6345694044 1916501.7801310136 2149208.945765232 2241478.4067733055 1959029.393324853 1.0571660336579582 0.99830715482451 1.1521116103487101 1.0803447032045508 1.1298258601349573 1.0072777066506156 0.9782914879487021 1.097078457877351 1.1441780375582224 1.0 20.901707613323687 -6.268902511345273 24.887416120006073 1.0472404431813507 1.0824460865402572 0.09308888894681366 0.05940063132174645 1677.1547617989913 5592822.96380485 0.022043713846628427 0.019766811646034176 5.383906246851718e-07 6.268902511345273 0.035205643358906524 SGTT(ph)PKPVINSTPGR ddPTM_KYSE-520_SHP099_60min_R1 1 SGTTPKPVINSTPGR 15 1 Q99459 Q99459 CDC5L Cell division cycle 5-like protein 1 S(0.219)GT(0.162)T(0.619)PKPVINSTPGR 124.91 0.00024077 946460000.0 1335700.0 1534000.0 1054900.0 968280.0 1133000.0 1522500.0 1116400.0 1594200.0 1641600.0 1814300.0 True False 1261606.0583480643 1460304.337419059 1122900.5418996788 1060305.0400760039 1222160.6541118291 1512997.5127573018 1229256.6070140274 1588670.0922890776 1343526.8213683711 1798226.7135040413 0.7015834259795235 0.8120802157217965 0.6244488158623693 0.5896392441028103 0.6796477023357725 0.8413830699962525 0.683593785912949 0.8834648492087965 0.7471398413108669 1.0 20.778143491082385 -8.215107890490088 0.46879156720501425 1.009905165167736 0.6843258954939996 0.5437027579185575 0.0814279638227119 1.1219751087321952 0.5601957294907767 0.1200502525551773 0.05120588596189012 6.093854906041101e-09 8.215107890490088 -0.3255792696737364 SGVGLSSYLSTEKDAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 SGVGLSSYLSTEKDASPK 18 1 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 SGVGLSSYLSTEKDAS(1)PK;SGVGLSSYLSTEKDAS(1)PK;SGVGLSSYLST(0.001)EKDAS(0.999)PK;SGVGLSSYLSTEKDAS(1)PK 191.47 2.5163e-12 2216970000.0 3467390.0 3940490.0 3430140.0 2730800.0 3102960.0 3068790.0 2515140.0 2705480.0 4587440.0 3113540.0 True False 3275046.964629401 3751182.9456039234 3651252.3128180527 2990334.4109550454 3347145.2985726763 3049636.543300148 2769394.896600912 2696095.3213437796 3754476.5359515804 3085956.457897468 1.0612745219551039 1.215565740081663 1.1831833542154815 0.9690138055260922 1.0846378891726691 0.9882305809907423 0.8974186558963192 0.8736660280620714 1.2166330235617098 1.0 21.5572862752968 -5.260462299043756 24.997759070760065 0.9971980436811645 1.1595636659316197 0.3267597675410626 0.09759663027236318 96.1745492384884 2460523.391552819 0.027011959112988395 0.04352272430948598 5.489562082403638e-06 5.260462299043756 0.16236562225045525 SGVRGT(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 SGVRGTPVR 9 1 A0A3B3ITP6;A0A3B3IS57;A0A3B3IT92;P33991;E5RFR3;A0A3B3IU45 A0A3B3ITP6 MCM4 DNA replication licensing factor MCM4 1 S(0.025)GVRGT(0.975)PVR 79.286 0.0386 3861700000.0 3658200.0 3179600.0 2898900.0 2155100.0 2629600.0 2579900.0 2319400.0 2020600.0 3190000.0 2529500.0 True False 3455272.353559092 3026847.243323102 3085767.7324039955 2359920.0560455574 2836534.5596226533 2563797.8871346884 2553867.587162608 2013591.0102115865 2610776.4133559377 2507090.5979212197 1.3782000364981095 1.2073146641899755 1.2308162038350716 0.9412982753803592 1.1314048889874964 1.0226187634625123 1.018657877493607 0.8031584546171473 1.041357027751885 1.0 21.25758270064162 -3.604872794270147 0.4433590583433266 0.9494456929855142 1.9937058513559531 0.6919867379592031 0.08620846634360137 4.814089534429316 0.47492423691624214 0.0583258544874931 2.9775621461091424 0.0002483860526517715 3.604872794270147 1.044260158370439 SGVSLAALK ddPTM_KYSE-520_SHP099_60min_R1 1 SGVSLAALK 9 0 P10412;P16403;P16402 P10412;P16402 HIST1H1E;HIST1H1C;HIST1H1D Histone H1.4;Histone H1.2;Histone H1.3 0 83.005 0.046144 0.0 231490.0 267840.0 221840.0 181340.0 251890.0 334840.0 289390.0 403370.0 449550.0 407120.0 False True 218648.78823612595 254972.56436396347 236140.1613565497 198574.49907814112 271712.30994194944 332750.1393574086 318644.3653742288 401970.80361726606 367923.05223327916 403513.2335345668 0.5418627446759946 0.6318815423487748 0.5852104509388311 0.49211396944464847 0.6733665400807066 0.8246325317330732 0.789675130560327 0.9961774985573835 0.9117992215780977 1.0 18.622256463036823 -6.528825668996344 1.0464690379000479 0.9687496344263016 0.5634924235240415 0.8941353445424198 0.0575588884831489 0.15877412384214634 0.35701234535318327 0.0371255943320521 0.026078557904409324 2.9592000865103e-07 6.528825668996344 -0.4052572109022601 SGVTNMSS(ph)PHK ddPTM_KYSE-520_SHP099_60min_R1 1 SGVTNMSSPHK 11 0 Q9NVG8 Q9NVG8 TBC1D13 TBC1 domain family member 13 1 SGVTNMS(0.01)S(0.99)PHK 70.92699999999999 0.015327 938890000.0 1591900.0 1734200.0 1437000.0 1932700.0 1639000.0 1528400.0 1365200.0 1304300.0 1780800.0 1486000.0 True False 1503594.1336260266 1650886.4289127318 1529631.319281293 2116383.226912558 1767979.9753656583 1518860.6886688082 1503207.7390680325 1299775.6877259088 1457451.6103148118 1472835.1960905069 1.0208841679076968 1.1208901262645299 1.0385624429274543 1.43694503806691 1.2003922638857243 1.03124958766634 1.0206218204576767 0.8824990679038855 0.9895551207517791 1.0 20.490164577372948 -6.4968571811783224 2.8222377517155746 0.9637041665784258 1.1680815664687427 0.3916424266213442 0.11247197474819447 0.2957188429423922 4.736758315719138 0.04857455205315867 0.0390299776816724 3.185244825203879e-07 6.4968571811783224 0.2043773998903169 SGYFPSSSVKPCPVDGRPPISRPPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 SGYFPSSSVKPCPVDGRPPISRPPSR 26 3 P52735-3;P52735-2;P52735 P52735-3 VAV2 Guanine nucleotide exchange factor VAV2 1 SGYFPSSSVKPCPVDGRPPIS(0.093)RPPS(0.907)R;SGYFPSSSVKPCPVDGRPPIS(0.482)RPPS(0.518)R 107.0 0.0014405 6093200000.0 2469110.0 2387010.0 2203960.0 2693900.0 2472500.0 2487520.0 2711900.0 2500840.0 3059100.0 2505550.0 True False 2332143.546251242 2272334.4566249433 2346030.788060681 2949927.4460494323 2667071.683399379 2471994.464981306 2986045.3175934586 2492165.169740442 2503644.5536354706 2483352.776288401 0.9391108538903784 0.9150268452882301 0.9447029880172884 1.18788094636251 1.0739801887452989 0.9954262191761288 1.2024249418386614 1.0035485870296736 1.008171121534089 1.0 21.24385778953824 -5.091328118625116 9.545529170456739 1.0703438202110904 0.9277536521101742 0.4300753512717673 0.07103174700860032 0.3687183368998947 36.206836959478636 0.01913400412054454 0.03322371841313282 8.103485910948072e-06 5.091328118625116 -0.14259016810091618 SGYLLPDTK ddPTM_KYSE-520_SHP099_60min_R1 2 SGYLLPDTK 9 0 P14625;H0YIV0 P14625 HSP90B1 Endoplasmin 0 ; 99.65299999999999 0.020552 280460000.0 770760.0 906410.0 645790.0 478180.0 793960.0 863660.0 655170.0 767220.0 720520.0 819890.0 False True 728004.4063280333 862864.7030508526 687418.6567005332 523626.08342994004 856440.1349855507 858269.5775815892 721400.9774430136 764558.6928904934 589691.7308311039 812626.4124647679 0.8958660402385045 1.0618221236911405 0.8459221188929013 0.6443626190314633 1.0539161930362217 1.0561674644297883 0.8877400074345855 0.9408489327482221 0.7256615362064305 1.0 19.63223273109623 -11.491490460845398 2.1352756694901727 2.046201578536492 0.9066970928621506 0.04631874799890934 0.13229078753225995 25958459.286051832 981977.6455263054 132504011.06634952 0.03585666508413266 3.2248501514535648e-12 11.491490460845398 -1.1395044856743413 SGYSSPGS(ph)PGTPGSR ddPTM_KYSE-520_SHP099_60min_R1 2 SGYSSPGSPGTPGSR 15 0 A0A0G2JQJ7;A0A0G2JS76;A0A0G2JPD5;A0A0G2JMX7;P10636;P10636-9;I3L170;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 SGYSS(0.001)PGS(0.999)PGTPGSR;SGYSS(0.19)PGS(0.81)PGTPGSR 210.62 4.8437000000000004e-14 1619960000.0 1173010.0 1070880.0 930200.0 871800.0 896840.0 1088140.0 1025540.0 1102470.0 1297760.0 1171180.0 True False 1107940.796962538 1019433.3173763491 990162.1803726228 954655.6098837728 967416.2056784234 1081348.514634962 1129211.5915058814 1098645.7888884319 1062119.4978673342 1160804.2563642524 0.9544596264944034 0.8782129388199434 0.8529966830703253 0.82240877792251 0.8334016698977841 0.9315511281995525 0.9727838137350373 0.9464522402161871 0.9149858747020724 1.0 20.14669328383487 -6.421048177177752 5.083417181785027 0.9539144728273666 0.8658242311259173 0.5477247281259507 0.03900037190604249 0.19035155525049358 7.562728808532449 0.014868856268021221 0.012943749666119346 3.792729091181279e-07 6.421048177177752 -0.0880902417014493 SHDDGNIDLES(ph)DSFLKFDSEPSAVALELPTR ddPTM_KYSE-520_SHP099_60min_R1 7 SHDDGNIDLESDSFLKFDSEPSAVALELPTR 31 1 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;P18583-8 P18583-10 SON Protein SON 1 S(0.026)HDDGNIDLES(0.824)DS(0.151)FLKFDSEPSAVALELPTR;S(0.001)HDDGNIDLES(0.942)DS(0.056)FLKFDSEPSAVALELPTR;SHDDGNIDLES(0.802)DS(0.198)FLKFDSEPSAVALELPTR;SHDDGNIDLES(0.997)DS(0.003)FLKFDSEPSAVALELPTR;SHDDGNIDLES(0.72)DS(0.28)FLKFDSEPSAVALELPTR;SHDDGNIDLES(0.99)DS(0.01)FLKFDSEPSAVALELPTR;S(0.054)HDDGNIDLES(0.47)DS(0.47)FLKFDS(0.004)EPS(0.001)AVALELPTR 265.7 1.5395999999999999e-41 1560695000.0 635952.0 780948.0 798302.0 773371.0 645695.0 721147.0 622113.0 742961.0 940923.0 724894.0 True False 600674.4748211177 743430.0858531545 849761.8242483608 846871.9473175295 696507.5229980026 716646.054077103 685002.2532777841 740383.8416994007 770075.1019385911 718472.003118999 0.8360443722420584 1.0347377248185157 1.1827347768032885 1.1787125227442772 0.9694288990724133 0.9974585661877301 0.9534153736040967 1.0304978321845235 1.07182339547759 1.0 19.454572414350693 SHEAEVLK ddPTM_KYSE-520_SHP099_60min_R1 2 SHEAEVLK 8 0 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 0 ; 89.355 0.018914 522220000.0 1545410.0 1506590.0 1174420.0 1108330.0 1452410.0 1497690.0 1055280.0 1473070.0 1413320.0 1356880.0 False True 1459683.0266015432 1434211.1549623064 1250124.9923384385 1213665.3499684345 1566706.4039175326 1488342.3611701014 1161958.000940311 1467960.2639871214 1156696.714897873 1344859.098836666 1.0853798943429855 1.066439715657151 0.9295583406617284 0.9024479598035832 1.164959515292546 1.1066901822336273 0.8639998063331924 1.09153461894777 0.8600876596651964 1.0 20.359023598568577 -6.747746631488225 24.99993526215032 0.961533373105018 1.037719634268275 0.16705720910177535 0.09603365337382289 522.637918791852 954221.8511294448 0.03796660779231718 0.029249580131809446 1.7875301203557848e-07 6.747746631488225 0.07618626116325711 SHEFYK ddPTM_KYSE-520_SHP099_60min_R1 1 SHEFYK 6 0 A0A494C1B8;A0A494C0U1;Q5VZU9;P29144 A0A494C1B8 TPP2 Tripeptidyl-peptidase 2 0 116.0 0.014437 314270000.0 1044400.0 955340.0 679420.0 674110.0 1022700.0 985260.0 840530.0 858310.0 845100.0 866860.0 False True 986465.0500402162 909444.0324054245 723216.5003104362 738177.2117214378 1103180.6716329828 979110.62687636 925498.975182282 855332.7229410589 691651.143237336 859180.2948068756 1.14814673474553 1.0585019674012042 0.8417517309018347 0.8591645038686128 1.2839920541717649 1.1395869211554044 1.0771883163245886 0.9955218108596385 0.8050128097884316 1.0 19.712601380108367 -7.546560064798881 8.923114287334716 0.901195195528937 1.0529294242776523 0.18225116846320932 0.13105056205699853 0.4825100506152115 160.0595922316329 0.09472965793512053 0.03621382599050382 2.840795263582257e-08 7.546560064798881 0.15173422874871534 SHEGETAYIR ddPTM_KYSE-520_SHP099_60min_R1 2 SHEGETAYIR 10 0 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 0 ; 169.37 6.8413e-05 184820000.0 54424.0 57335.0 46650.0 39288.0 66917.0 58496.0 41297.0 57454.0 47226.0 39982.0 False True 51404.992228445735 54580.54053841047 49657.13364263905 43021.919707632056 72182.98719435248 58130.90476601056 45471.70377988023 57254.70548386438 38650.94887057915 39627.7905855253 1.297195515291288 1.3773298922788522 1.2530886256569937 1.0856502235415193 1.8215243930535583 1.4669226799448118 1.1474700736025771 1.444811952367024 0.9753495791586485 1.0 15.274224912836603 -7.7681646409287035 24.983841992885157 0.9876744936229259 1.3611322045490628 0.378244729625834 0.19183959013842106 184.28761850361266 684583.5621149878 0.17555613404783232 0.04945211515920626 1.70543573617987e-08 7.7681646409287035 0.3734577109261369 SHELDIDENPAS(ph)DFDDSGSLLGFK ddPTM_KYSE-520_SHP099_60min_R1 5 SHELDIDENPASDFDDSGSLLGFK 24 0 Q96RS0 Q96RS0 TGS1 Trimethylguanosine synthase 1 SHELDIDENPAS(1)DFDDSGSLLGFK;SHELDIDENPAS(0.998)DFDDS(0.002)GSLLGFK;SHELDIDENPAS(0.994)DFDDS(0.003)GS(0.003)LLGFK;SHELDIDENPAS(0.996)DFDDS(0.002)GS(0.002)LLGFK;SHELDIDENPAS(1)DFDDSGSLLGFK 204.14 5.6289e-16 1153640000.0 547811.0 582337.0 556211.0 485658.0 534825.0 529603.0 438827.0 503222.0 579320.0 465396.0 True False 517422.83179584605 554360.6564143422 592065.2510290656 531814.7903015977 576912.6847620114 526297.5512307419 483187.9156988036 501476.4403348973 474130.0914687651 461272.9535126093 1.1217280958175708 1.2018061154309327 1.2835464262980703 1.15292862122483 1.2506969688311478 1.1409677225230053 1.047509748879294 1.0871576937605751 1.0278731667622136 1.0 18.815261177685464 -6.61178977724369 3.159292611376675 1.0467913526381536 1.2039714809625914 0.7203389741526199 0.0472895170445421 0.13829435513989163 2.769922560263159 0.019345532872955012 0.014548697246356532 2.4446135956942797e-07 6.61178977724369 0.15718012832443784 SHGS(ph)PTHVR ddPTM_KYSE-520_SHP099_60min_R1 6 SHGSPTHVR 9 0 Q5VT52-5 Q5VT52-5 RPRD2 Regulation of nuclear pre-mRNA domain-containing protein 2 1 SHGS(0.997)PT(0.003)HVR;SHGS(0.988)PT(0.012)HVR;SHGS(0.964)PT(0.036)HVR;SHGS(1)PTHVR;S(0.043)HGS(0.954)PT(0.003)HVR;SHGS(0.992)PT(0.008)HVR 185.99 4.0556e-06 1073255000.0 529283.0 634630.0 505934.0 734765.0 557285.0 639978.0 581842.0 577002.0 614199.0 569913.0 True False 499922.61689049733 604141.4222009497 538547.3151630218 804596.844684848 601140.1589820925 635983.6599142149 640660.267590698 575000.5147352794 502675.9442968034 564864.014205605 0.8850318029084613 1.0695342719797478 0.9534105583277532 1.4244080423788203 1.0642210228730968 1.1259057824893108 1.1341849568726534 1.017945027962048 0.8899061219251865 1.0 19.107544068257916 -7.50304988711217 4.692766142295092 0.9452846078949817 1.0995185850233666 0.1633134322743507 0.13533285628202726 0.3344298696131262 19.302370632082297 0.0883442493179042 0.036081920008517496 3.1401479664941876e-08 7.50304988711217 0.15423397712838494 SHHAPMS(ph)PGSSGGGGQPLAR ddPTM_KYSE-520_SHP099_60min_R1 1 SHHAPMSPGSSGGGGQPLAR 20 0 O14497-2;O14497 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 SHHAPMS(0.999)PGSSGGGGQPLAR 107.75 0.00016409 415990000.0 194960.0 269330.0 343480.0 226010.0 158850.0 222290.0 168880.0 121550.0 151500.0 194780.0 True False 184145.1801568751 256390.98252742796 365621.2703874316 247489.92244761603 171350.59126713505 220902.60565571094 185952.03850996876 121128.37141998326 123991.41900420829 193054.40073654716 0.9538512432470779 1.328076342985382 1.8938769020157113 1.2819698567004159 0.8875767173055519 1.1442505574227597 0.9632105655220432 0.627431288579025 0.6422615518276319 1.0 17.558647915784334 -6.241879767629357 1.0690167072620569 0.7658873641807624 1.3886184846380756 0.4396880686018566 0.2633403550456949 0.4764316853826598 1.141044403580902 0.15238761114323343 0.14039470090242837 5.729546288069536e-07 6.241879767629357 0.6227311204573132 SHHGEHERPEFIAYPHLR ddPTM_KYSE-520_SHP099_60min_R1 4 SHHGEHERPEFIAYPHLR 18 1 H0YIV9;P12074 H0YIV9 COX6A1 Cytochrome c oxidase subunit 6A1, mitochondrial 0 ;;; 194.37 5.3403e-12 7284650000.0 3418630.0 3592120.0 1910070.0 2301270.0 970050.0 2104780.0 1911290.0 2744150.0 3368110.0 796030.0 False True 3228991.7790300497 3419549.163317957 2033196.1684200563 2519982.008897945 1046387.4161705029 2091643.2872914996 2104501.845592833 2734631.184139426 2756546.127143657 788977.7935019688 4.092626947962373 4.334151343018026 2.57700050009707 3.19398344243976 1.326257120021074 2.651080048790093 2.667377793045048 3.4660432862139885 3.493819661144592 1.0 19.589625169282087 -4.763083219283717 24.999863441982864 2.622550840836087 4.213389566226826 0.417152761393236 0.7838519309789338 39.65148339518209 603071.7036176916 0.20298797032654528 0.46157318075214127 1.725507219509744e-05 4.763083219283717 1.5908387253907388 SHIAQWS(ph)PHTPPR ddPTM_KYSE-520_SHP099_60min_R1 3 SHIAQWSPHTPPR 13 0 P40189-3;P40189 P40189-3 IL6ST Interleukin-6 receptor subunit beta 1 SHIAQWS(1)PHTPPR;SHIAQWS(1)PHTPPR;SHIAQWS(0.994)PHT(0.006)PPR 128.64 0.00033682 1251230000.0 366970.0 437409.0 345634.0 476590.0 479020.0 506220.0 440650.0 456130.0 536170.0 388179.0 True False 346613.44256344164 416395.21507570526 367914.12067395315 521884.9703079912 516716.14874902763 503060.4932072254 485195.2023295687 454547.7914915423 438815.0437457845 384740.03605869215 0.9009029736394933 1.0822768000473548 0.956266793658635 1.3564613021671017 1.3430267201778878 1.307533518893998 1.26109881181056 1.1814413601141343 1.1405494687816768 1.0 18.553524438768463 -5.2503606894554515 24.973876312032516 1.244309748606576 0.9900616303963697 0.5153207644364378 0.10890501619537285 568.422708211466 1281351.6734569347 0.029611717435702112 0.050668219479605744 5.618744843925064e-06 5.2503606894554515 -0.2542481182102062 SHIEIIR ddPTM_KYSE-520_SHP099_60min_R1 2 SHIEIIR 7 0 P00390-5;P00390-4;P00390-2;P00390-3;P00390 P00390-5 GSR Glutathione reductase, mitochondrial 0 ; 99.375 0.0090698 1014070000.0 1438940.0 1414820.0 835190.0 2057210.0 1430630.0 1160190.0 1532150.0 1340570.0 1648010.0 985940.0 False True 1359119.1297442254 1346849.923511883 889027.6837512478 2252726.61987726 1543212.4418287808 1152948.8238593712 1687034.6743430153 1335919.8755613912 1348772.926951323 977205.3386497138 1.390822456641747 1.3782670542640896 0.909765479770804 2.3052745730902786 1.579209998955968 1.1798429442193765 1.7263870832655621 1.3670820478808918 1.3802349144091202 1.0 19.898302219767757 -8.282324623654508 1.3972734718002033 1.0010710884749476 1.4903542207404423 0.14937967193291224 0.34561826710118404 2.043753756900631 6.783444621608237 0.33447995549954024 0.09888549633063894 5.220058575449254e-09 8.282324623654508 0.4892831322654947 SHILEDDENS(ph)VDISMLK ddPTM_KYSE-520_SHP099_60min_R1 6 SHILEDDENSVDISMLK 17 0 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK;SHILEDDENS(1)VDISMLK 281.67 2.1745999999999996e-37 2245420000.0 3145300.0 3356400.0 3314470.0 2986980.0 2927910.0 2846690.0 2707980.0 3412940.0 3624200.0 3221170.0 True False 2970823.9389999 3195153.5059408904 3528126.0395395034 3270861.6811317145 3158319.8594709313 2828922.751783958 2981729.0457379455 3401101.3077261806 2966136.6386472043 3192632.9398323395 0.930524740860411 1.0007894944881084 1.1050835175949736 1.024502892369294 0.9892524192388963 0.8860782949675757 0.9339404503840427 1.065296691421341 0.9290565794898333 1.0 21.606315263690306 -5.996337649904314 11.769207635920097 0.9620975173327228 1.018917219384054 0.1459647836584479 0.05945403271520185 0.36468484129145623 1046.6013670731452 0.01966284301923434 0.021769544208486938 1.0084685295663032e-06 5.996337649904314 0.056819702051331356 SHILEQHPHTLDLS(ph)PSEK ddPTM_KYSE-520_SHP099_60min_R1 2 SHILEQHPHTLDLSPSEK 18 0 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 SHILEQHPHTLDLS(0.999)PS(0.001)EK;SHILEQHPHTLDLS(1)PSEK 203.84 6.3057e-13 1406160000.0 921640.0 914840.0 830650.0 864360.0 835690.0 674330.0 677430.0 741530.0 1162390.0 712260.0 True False 870514.7919562097 870889.7131971652 884195.0280869908 946508.5145206907 901454.0485743292 670121.2563399873 745911.2354796773 738957.8055044024 951329.2774673386 705949.9305298949 1.2331112368022905 1.2336423243833516 1.2524897161237807 1.340758704813852 1.2769376546261384 0.949247570343956 1.0566064294670119 1.0467566799669934 1.347587465237455 1.0 19.42920633847464 -6.233255225165242 24.573283462128632 1.0814973440042093 1.2687616824628039 0.455707846607471 0.10236296761076537 558.5628119418818 487001.56941203 0.03401054111321817 0.03400307770606015 5.844465170389912e-07 6.233255225165242 0.18726433845859458 SHKEPPS(ph)PADVPEK ddPTM_KYSE-520_SHP099_60min_R1 2 SHKEPPSPADVPEK 14 1 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 S(0.029)HKEPPS(0.971)PADVPEK;S(0.036)HKEPPS(0.964)PADVPEK 63.128 0.020026 977570000.0 1149790.0 1177490.0 1092980.0 1024370.0 1108140.0 1174000.0 1246250.0 1350670.0 1628400.0 1305270.0 True False 1086008.8566504614 1120921.6129514782 1163435.2396298323 1121725.8168119297 1195344.3135458822 1166672.6305268116 1372233.1122279025 1345984.8410187468 1332723.608623451 1293706.3232846924 0.8394554754073618 0.8664420918230364 0.8993039754771357 0.8670637196577134 0.9239688266429191 0.9018063910862358 1.0606990841196728 1.040409880351609 1.0301593063560939 1.0 20.30307872604687 -6.702582823074548 5.46633415734343 1.0361797559433041 0.8826106448577995 0.8921388175305378 0.025546269761682113 0.06157190177492892 3.6968734137271246 0.010497449306361473 0.007935889045471912 1.9834313661700422e-07 6.702582823074548 -0.15356911108550464 SHLEPSGNPLPATPTTSAPSAPPASSQGPDT(ph)APRPSPPQEEAR ddPTM_KYSE-520_SHP099_60min_R1 2 SHLEPSGNPLPATPTTSAPSAPPASSQGPDTAPRPSPPQEEAR 43 1 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 SHLEPSGNPLPATPTTSAPS(0.001)APPAS(0.073)S(0.073)QGPDT(0.485)APRPS(0.367)PPQEEAR;SHLEPSGNPLPATPTTSAPS(0.013)APPAS(0.059)S(0.059)QGPDT(0.434)APRPS(0.434)PPQEEAR 180.06 2.7129999999999998e-11 1496370000.0 265384.0 438960.0 312785.0 454047.4 233640.0 422240.0 279176.0 365303.0 398573.0 422138.0 True False 250662.620490112 417871.7027076072 332947.6215736945 497199.92838167085 252026.1387702452 419604.6435380247 307397.8345751953 364035.8491553608 326202.19040768483 418398.1857383942 0.5991006391381444 0.99874166990027 0.7957673644929997 1.1883415017782795 0.6023595401721601 1.0028835158486678 0.7347016432031028 0.8700703338684557 0.7796453271708127 1.0 18.674517070209294 SHPLDLS(ph)PNVQSR ddPTM_KYSE-520_SHP099_60min_R1 7 SHPLDLSPNVQSR 13 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBM4 H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 SHPLDLS(0.989)PNVQS(0.011)R;SHPLDLS(0.999)PNVQS(0.001)R;SHPLDLS(1)PNVQSR;SHPLDLS(1)PNVQSR;SHPLDLS(1)PNVQSR;SHPLDLS(1)PNVQSR;SHPLDLS(0.999)PNVQS(0.001)R 210.62 3.7695e-11 3891940000.0 5963050.0 5562870.0 5204540.0 5275700.0 5688470.0 5266410.0 5089790.0 5537060.0 6556290.0 5436210.0 True False 5632267.729454537 5295621.375161892 5540032.975958437 5777100.941802957 6136120.226033112 5233540.381714405 5604315.644763455 5517853.231219523 5365833.00662112 5388049.408707385 1.0453259245085025 0.9828457338575767 1.0282075303551297 1.072206378149919 1.1388388933696123 0.9713237546145577 1.040138131566977 1.0240910601714912 0.995876726362167 1.0 22.361331649777377 -7.271249100887341 1.1423445846950862 0.9995321745367274 1.043248212151398 0.13045859273850402 0.043472305253492466 1.2199035307540793 2.8076099655561473 0.04029249287358076 0.015640454773724395 5.354894255340199e-08 7.271249100887341 0.04371603761467058 SHQDFSR ddPTM_KYSE-520_SHP099_60min_R1 3 SHQDFSR 7 0 Q07065 Q07065 CKAP4 Cytoskeleton-associated protein 4 0 ;; 119.27 0.0025974 424120000.0 372080.0 507790.0 381819.0 484880.0 504780.0 506990.0 430350.0 466130.0 508790.0 379380.0 False True 351439.98067690904 483395.00619167136 406431.66367200034 530962.8494155118 544503.3141946777 503825.68735160824 473853.97781125683 464513.1038255598 416406.56155215256 376018.98835317336 0.9346335997979478 1.2855600944749253 1.080880690233287 1.4120639272525473 1.4480739831235772 1.3398942685266555 1.2601863003955338 1.2353448049524267 1.1074083342861543 1.0 18.520445991954777 -7.908812600110745 2.2003156662388044 1.001125585732388 1.2633439676844007 0.2453844567319694 0.1428384622909962 0.40900216894142827 4.266356862350972 0.14123001977343191 0.03942893031469802 1.2336370379489416e-08 7.908812600110745 0.26221838195201275 SHS(ph)AGRTPGRTPGK ddPTM_KYSE-520_SHP099_60min_R1 1 SHSAGRTPGRTPGK 14 2 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 S(0.254)HS(0.717)AGRT(0.029)PGRTPGK 66.152 0.017184 572220000.0 122380.0 195000.0 156810.0 111220.0 149790.0 95550.0 85094.0 111920.0 165020.0 101240.0 True False 115591.33744151832 185631.9072990329 166918.2235048708 121790.31536048766 161577.62081148362 94953.63700752702 93696.13195740909 111531.77564232424 135056.52781567295 100343.09236352825 1.1519610839054861 1.8499719604665543 1.6634749794250974 1.213738908098021 1.6102515579857923 0.9462897223012021 0.9337576683202248 1.1115042701520603 1.345947435289148 1.0 16.61458177917031 -6.25984274114224 24.999237241670727 1.0661099451112226 1.5108545261675104 0.4895908770001418 0.21951534304763579 126.46753729749999 1980166.4210953505 0.07537560208136243 0.0716308468340673 5.497398996847067e-07 6.25984274114224 0.4447445810562878 SHS(ph)ANDSEEFFREDDGGADLHNATNLR ddPTM_KYSE-520_SHP099_60min_R1 3 SHSANDSEEFFREDDGGADLHNATNLR 27 1 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 S(0.148)HS(0.849)ANDS(0.003)EEFFREDDGGADLHNATNLR;S(0.026)HS(0.681)ANDS(0.293)EEFFREDDGGADLHNATNLR;S(0.042)HS(0.751)ANDS(0.207)EEFFREDDGGADLHNATNLR 107.36 0.00070084 2246790000.0 408992.0 530871.0 456605.0 539950.0 411436.0 415272.0 527729.0 506535.0 658328.0 380920.0 True False 386304.39845466113 505367.1603063837 486038.4888938309 591266.6856581129 443813.67244938604 412680.1334106734 581076.997458712 504777.9483111583 538792.2302983656 377545.345151276 1.0232000034323707 1.338560167134074 1.2873645381565586 1.5660812489191263 1.1755241539835632 1.0930611083161932 1.5390919393427678 1.3369995281199993 1.4270927644002094 1.0 18.526290404427172 -6.756040867881534 24.99852833018856 1.3538793378175855 1.2644956689201672 0.02682570206249768 0.18912198008588632 482.7277685478938 2235345.2532031033 0.07296787922292489 0.05486208173410084 1.7537154663389342e-07 6.756040867881534 -0.08938366889741833 SHS(ph)DNDRPNCSWNTQYSSAYYTSR ddPTM_KYSE-520_SHP099_60min_R1 1 SHSDNDRPNCSWNTQYSSAYYTSR 24 1 O75494-3;O75494-6 O75494-3 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.313)HS(0.686)DNDRPNCS(0.001)WNTQYSSAYYTSR 184.06 3.6715000000000006e-15 1019700000.0 148340.0 147360.0 142130.0 179920.0 141970.0 146790.0 117600.0 156480.0 174330.0 147020.0 True False 140111.28449154124 140280.60440813057 151291.92721604067 197019.54270507937 153142.23130119714 145873.8291610142 129488.15566539731 155937.20740270644 142676.06650167392 145717.51717982918 0.9615267073115903 0.9626886809703946 1.0382549067819495 1.3520649165462972 1.0509527904747729 1.0010727054935482 0.888624498766313 1.0701335736476019 0.9791277621454267 1.0 17.15281479335878 -6.224021328020178 4.736404102314276 0.985497293410561 1.081686183262056 0.13116283427832687 0.11004197595508225 0.45758722822753334 25.259939007555655 0.040828656541463976 0.039750548102342236 5.970059671508154e-07 6.224021328020178 0.09618888985149487 SHS(ph)FCK ddPTM_KYSE-520_SHP099_60min_R1 4 SHSFCK 6 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 S(0.42)HS(0.58)FCK;S(0.001)HS(0.999)FCK;S(0.003)HS(0.997)FCK;S(0.001)HS(0.999)FCK 98.523 0.008390799999999999 2014430000.0 2487060.0 2587950.0 2432910.0 2734110.0 2868870.0 2573860.0 2576870.0 2892200.0 3019930.0 2687550.0 True False 2349097.8239688054 2463620.9974078564 2589739.2713936325 2993958.9923598557 3094633.7473625825 2557795.5850151074 2837365.167427659 2882167.6332445545 2471586.838240124 2663740.397882263 0.8818794150647691 0.9248727839118608 0.9722190921654891 1.1239680093225766 1.1617625162808245 0.9602270502968742 1.0651808147984059 1.0820001962413253 0.9278632558206851 1.0 21.345022056786828 -4.939901774180489 3.22655180374582 1.0513827047227313 0.9024729236946214 0.41252979770071874 0.06797920178784385 0.23066188806994678 4.865674981457708 0.01892371882569989 0.04392164193427599 1.1484133325680134e-05 4.939901774180489 -0.14890978102810992 SHS(ph)GPAGSFNKPAIR ddPTM_KYSE-520_SHP099_60min_R1 4 SHSGPAGSFNKPAIR 15 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 SHS(1)GPAGSFNKPAIR;S(0.008)HS(0.992)GPAGSFNKPAIR;S(0.001)HS(0.999)GPAGSFNKPAIR;SHS(1)GPAGSFNKPAIR 270.32 1.9490999999999998e-25 4873050000.0 3198860.0 3811230.0 3456570.0 5282230.0 3660020.0 3454710.0 3455560.0 3535400.0 4429090.0 3676650.0 True False 3021412.859030683 3628132.790027137 3679386.0329075437 5784251.551039646 3948042.751334843 3433147.873430392 3804881.7278156504 3523136.5225685593 3624878.9042729274 3644077.741390419 0.8291296381283692 0.9956244206367567 1.009689225648532 1.5873019077887816 1.0834134262537563 0.9421170779195436 1.0441274851518056 0.9668115700584055 0.994731496285212 1.0 21.797122306708392 -6.015120593134353 24.856523607609905 0.9933240043387686 1.121328973253763 0.08273726393410685 0.18350174305999944 1748.8990572204145 2874989.796619923 0.0639893530223768 0.06614614035261804 9.657826671305966e-07 6.015120593134353 0.12800496891499447 SHS(ph)GT(ph)SPDNTAPPPPPPRPQPSHSR ddPTM_KYSE-520_SHP099_60min_R1 2 SHSGTSPDNTAPPPPPPRPQPSHSR 25 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 2 S(0.126)HS(0.777)GT(0.579)S(0.517)PDNTAPPPPPPRPQPSHSR;S(0.005)HS(0.932)GT(0.657)S(0.403)PDNT(0.003)APPPPPPRPQPSHSR 159.59 3.768e-10 2657040000.0 97121.0 126352.0 120392.0 182713.0 140312.0 131326.0 140154.0 160872.0 191775.0 148532.0 True False 91733.50452408651 120281.86026178129 128152.66095401089 200077.98858533328 151353.75613392674 130506.34572109359 154322.13409122542 160313.97257980693 156953.49425433678 147216.12203614754 0.6231213216006478 0.8170427165052425 0.8705069742466399 1.3590766134717636 1.028105849009956 0.8864949294687233 1.0482692517422314 1.088970218495793 1.0661433821480388 1.0 17.16757614792389 -4.784303046427422 2.385140918081795 1.0623250432028462 0.6756792886043971 0.5740964301264149 0.1212180717055167 0.21985125288505766 2.448776771397004 0.034376779365288296 0.11214278559459785 1.643224697002255e-05 4.784303046427422 -0.3866457545984491 SHS(ph)GTS(ph)PDNTAPPPPPPRPQPS(ph)HSR ddPTM_KYSE-520_SHP099_60min_R1 1 SHSGTSPDNTAPPPPPPRPQPSHSR 25 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 3 S(0.445)HS(0.539)GT(0.221)S(0.794)PDNT(0.003)APPPPPPRPQPS(0.548)HS(0.45)R 75.53399999999999 0.0015128 0.0 66428.0 82999.0 72498.0 64711.0 70270.0 66041.0 70431.0 67700.0 95353.0 79336.0 True False 62743.10641906506 79011.60345596103 77171.33708090126 70861.11398392846 75799.84921839206 65628.81362233493 77550.85282031966 67465.1645012988 78039.29885351993 78633.14476247395 0.7979218764376306 1.0048129665248704 0.9814097771876178 0.9011608806690569 0.9639681771263201 0.8346202332436147 0.9862361864653442 0.8579736281066958 0.9924478931785337 1.0 16.262849932557085 -7.903058385160155 10.131445539390128 0.9999137669361914 0.9219172083517592 0.18639919323568266 0.06620643474068547 0.5159363789193606 47.18485950308026 0.060033526521630395 0.015508827929796208 1.250090960692863e-08 7.903058385160155 -0.07799655858443222 SHS(ph)GTS(ph)PDNTAPPPPPPRPQPSHSR ddPTM_KYSE-520_SHP099_60min_R1 1 SHSGTSPDNTAPPPPPPRPQPSHSR 25 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 2 S(0.398)HS(0.473)GT(0.315)S(0.814)PDNTAPPPPPPRPQPSHSR 105.61 0.0018039999999999998 1244200000.0 14759.0 25966.0 20961.0 23362.0 17592.0 17157.0 20781.0 23249.0 25455.0 25620.0 True False 13940.288848662922 24718.554384239415 22312.1795987858 25582.317455958582 18976.39031521211 17049.916798933984 22881.7462830155 23168.35464535738 20833.013668330837 25393.026732058373 0.5489809858335432 0.9734386784633497 0.8786734970281016 1.007454437231826 0.7473071452035553 0.6714409030022672 0.901103540135591 0.9123904326106831 0.8204226257923567 1.0 14.632144747401272 -13.999999999452635 0.21692584919087093 1.8134421785820591 0.8161633498424348 0.13942304820132823 0.13237515011146944 344.5433055758096 3.445264315865074 122.15206199235709 0.266769517957087 1.000000001260354e-14 13.999999999452635 -0.9972788287396244 SHS(ph)GTSPDNTAPPPPPPRPQPSHSR ddPTM_KYSE-520_SHP099_60min_R1 5 SHSGTSPDNTAPPPPPPRPQPSHSR 25 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.121)HS(0.494)GT(0.192)S(0.192)PDNTAPPPPPPRPQPSHSR;S(0.012)HS(0.329)GT(0.329)S(0.329)PDNTAPPPPPPRPQPSHSR;S(0.012)HS(0.329)GT(0.329)S(0.329)PDNTAPPPPPPRPQPSHSR;S(0.009)HS(0.36)GT(0.316)S(0.316)PDNTAPPPPPPRPQPSHSR;S(0.033)HS(0.322)GT(0.322)S(0.322)PDNTAPPPPPPRPQPSHSR 108.88 0.00034835 6026960000.0 938476.0 1034320.0 884111.0 1052058.0 917305.0 847731.0 747128.0 719577.0 850115.0 582353.0 True False 886416.8654744757 984629.7146540292 941102.2096876163 1152045.2760072288 989491.6847485005 842439.9963791516 822654.9895066074 717080.9553375349 695755.5456551977 577193.8054837786 1.535735236679333 1.7058909941501463 1.6304787070589326 1.9959418570711007 1.7143144561628687 1.459544417101038 1.425266490545743 1.2423573304576772 1.2054106247243002 1.0 19.13869629116511 -7.056214682183673 0.9552858445322283 1.06935671308278 1.725076150688202 0.7999612537272203 0.12348201177791542 0.2627469222864352 0.43912512700812095 0.11133567896936943 0.05117016272463769 8.78588102287529e-08 7.056214682183673 0.6557194376054221 SHS(ph)ITNMEIGGLK ddPTM_KYSE-520_SHP099_60min_R1 3 SHSITNMEIGGLK 13 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 S(0.122)HS(0.876)IT(0.002)NMEIGGLK;S(0.105)HS(0.894)IT(0.002)NMEIGGLK;S(0.122)HS(0.876)IT(0.003)NMEIGGLK 200.69 6.5246e-09 1911590000.0 1469830.0 1390140.0 1042770.0 1579990.0 1379600.0 1572630.0 1387860.0 1861650.0 2122070.0 1330770.0 True False 1388295.5998665357 1323355.5877573185 1109988.6226909924 1730151.7745586836 1488166.6711497628 1562814.6328325225 1528158.4330083188 1855192.3706623754 1736755.5810314217 1318980.413123394 1.0525520970997597 1.003317088404341 0.8415504973743307 1.3117342436205106 1.128270485553102 1.1848656866190457 1.1585906946029498 1.4065351935509125 1.3167409945980326 1.0 20.330991710032237 -5.26709528774572 24.999626851664807 1.224936417066852 0.9695576116614539 0.4826626922059364 0.11802618817371703 381.6893960275637 1687102.0296015847 0.03338894936791318 0.05110564792953497 5.406356900588373e-06 5.26709528774572 -0.25537880540539803 SHS(ph)LSGAR ddPTM_KYSE-520_SHP099_60min_R1 1 SHSLSGAR 8 0 A0A0J9YYJ3;Q9Y519 A0A0J9YYJ3 TMEM184B Transmembrane protein 184B 1 S(0.056)HS(0.922)LS(0.022)GAR 75.387 0.029845999999999998 0.0 364670.0 337970.0 302400.0 395380.0 375120.0 348650.0 337260.0 349470.0 415510.0 395240.0 True False 344441.0281483779 321733.41389668785 321893.18785710767 432956.7963246684 404639.8098591607 346473.94602484885 371353.5321404074 348257.77013691084 340063.8581547102 391738.4810920667 0.8792626835846313 0.8212964245937172 0.8217042833263452 1.1052189591323671 1.0329335242509963 0.8844521606837503 0.9479628631457618 0.8890057702936338 0.868088979174829 1.0 18.57953132790767 SHS(ph)METMVGGQK ddPTM_KYSE-520_SHP099_60min_R1 1 SHSMETMVGGQK 12 0 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 S(0.002)HS(0.996)MET(0.002)MVGGQK 104.94 0.0010452999999999999 0.0 434980.0 422300.0 381260.0 397050.0 415290.0 423900.0 490570.0 511330.0 544100.0 499400.0 True False 410850.7922888673 402012.0741147767 405836.62963756826 434785.512622565 447970.96032312635 421254.2828622793 540161.6031018196 509556.3155753197 445305.1556448169 494975.704527321 0.8300423405249979 0.8121854677669073 0.8199122218031359 0.8783976842616248 0.9050362598118185 0.8510605248080968 1.0912891242160039 1.0294572257075174 0.8996505314741919 1.0 18.9169981878752 -6.740531503646518 24.951196378966124 1.0075539711040618 0.8502469969654542 0.6928797417161306 0.050757900039291835 136.32881920080845 162693.01691041025 0.020402792789343715 0.01578671466108431 1.817475211976406e-07 6.740531503646518 -0.1573069741386075 SHS(ph)NLGVKDGDSGR ddPTM_KYSE-520_SHP099_60min_R1 3 SHSNLGVKDGDSGR 14 1 A0A087X0H5;P10912-4;P10912 A0A087X0H5 GHR Growth hormone receptor;Growth hormone-binding protein 1 S(0.001)HS(0.948)NLGVKDGDS(0.052)GR;S(0.002)HS(0.499)NLGVKDGDS(0.499)GR;SHS(0.843)NLGVKDGDS(0.156)GR 57.788000000000004 0.03143 3430000000.0 1113700.0 1444470.0 1079980.0 2763700.0 1227160.0 1046230.0 1212420.0 1129470.0 1661390.0 945190.0 True False 1051920.8408940926 1375075.4930063258 1149597.2388290965 3026361.2170632933 1323730.5104147142 1039700.0904906855 1334983.2456789212 1125552.1321902808 1359723.4562336747 936816.3519466917 1.1228677197064454 1.4678175611996283 1.227131909514868 3.2304743728848835 1.4130096124646203 1.1098227398894167 1.4250212892898848 1.2014650788827486 1.451430105172895 1.0 19.837406732456248 -5.984587379260847 24.99976328974455 1.261807180421038 1.7802064965293798 0.16459413650023635 0.5564825841391398 469.5348201308326 761596.3226711263 0.17865636383359682 0.20251457620601548 1.0361261167655437e-06 5.984587379260847 0.5183993161083418 SHS(ph)PSASQSGSQLR ddPTM_KYSE-520_SHP099_60min_R1 6 SHSPSASQSGSQLR 14 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 SHS(0.999)PS(0.001)ASQSGSQLR;S(0.028)HS(0.969)PS(0.003)ASQSGSQLR;S(0.001)HS(0.997)PS(0.002)ASQSGSQLR;S(0.048)HS(0.951)PSASQSGSQLR;S(0.062)HS(0.894)PS(0.043)ASQSGSQLR;SHS(0.995)PS(0.004)ASQSGSQLR 247.45 1.1345e-18 2062680000.0 600644.0 805051.0 1147006.0 1846277.0 551897.0 635849.0 491749.0 475376.0 691089.0 612478.0 True False 567325.0799658712 766375.1415538137 1220943.8420344885 2021746.6109765787 595328.1540356198 631880.4305347895 541459.7879277506 473727.0316095927 565604.6585359687 607051.9214206731 0.9345577535413612 1.2624540249543716 2.0112675686408084 3.3304344153052345 0.9806873729060664 1.040900140890767 0.8919497143845317 0.7803731689061086 0.9317236937695443 1.0 19.21146039054318 -5.9519223437408515 24.99999766209696 0.923811268820068 1.8875624298479012 0.38531994439584105 0.5862872799292552 131.89021510085084 68581.19576067835 0.19578535583657286 0.2219996705809103 1.1170629721153356e-06 5.9519223437408515 0.9637511610278332 SHS(ph)QASLAGPGPVDPSNR ddPTM_KYSE-520_SHP099_60min_R1 2 SHSQASLAGPGPVDPSNR 18 0 Q9P2M7-2;Q9P2M7;A6PVU7;A2A3M4 Q9P2M7-2 CGN Cingulin 1 S(0.002)HS(0.998)QASLAGPGPVDPSNR;SHS(0.997)QAS(0.002)LAGPGPVDPSNR 210.12 4.0978e-18 617510000.0 365850.0 345710.0 386620.0 459830.0 352350.0 359300.0 340341.0 363880.0 498980.0 342030.0 True False 345555.5711961064 329101.57267871045 411542.14381387184 503532.1049470696 380077.9404027391 357057.475424432 374745.9896880693 362617.78521023033 408377.8102621767 338999.88029531314 1.0193383280698576 0.9708014421480622 1.2139890534927769 1.4853459668139926 1.1211742613939615 1.0532672610780522 1.1054457876551953 1.0696693606332337 1.2046547329350863 1.0 18.370925238366606 -5.988437284861794 24.999791637297978 1.091592613553523 1.1787333830606466 0.0790510104015385 0.13682482823395828 685.315752331274 1481715.01946986 0.046768806679221175 0.052988792991296725 1.026981724251226e-06 5.988437284861794 0.08714076950712357 SHS(ph)WMEKR ddPTM_KYSE-520_SHP099_60min_R1 1 SHSWMEKR 8 1 Q6UXU4-4 Q6UXU4-4 1 SHS(1)WMEKR 58.699 0.02648 2284100000.0 1561900.0 1428000.0 1362500.0 1139100.0 1649100.0 1389200.0 1438000.0 1536500.0 1927900.0 1471800.0 True False 1475258.2934295433 1359396.7365283018 1450328.9300770783 1247359.7215170972 1778874.7879045163 1380529.4875024243 1583367.073527562 1531170.2401217953 1577841.9584040458 1458760.9970430746 1.0113091153519382 0.931884482299578 0.994219706324005 0.8550816234088447 1.219442246886444 0.9463712632163689 1.0854191171391787 1.0496374959472423 1.0816315774841456 1.0 20.476312101225748 -5.7392009614980095 24.999992752586454 1.0614467593433632 0.9502564121547353 0.3551936718259262 0.0762615715771098 266.8340170164693 299968.21202070295 0.021055443403785738 0.027160754478981336 1.8230519245654606e-06 5.7392009614980095 -0.11119034718862786 SHSAGRT(ph)PGRT(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 3 SHSAGRTPGRTPGK 14 2 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 2 S(0.002)HS(0.032)AGRT(0.966)PGRT(1)PGK;S(0.027)HS(0.154)AGRT(0.82)PGRT(0.999)PGK;S(0.015)HS(0.078)AGRT(0.908)PGRT(0.999)PGK 71.872 0.036564 12437300000.0 2602730.0 3280740.0 3126940.0 2947140.0 2541840.0 2636940.0 2376500.0 2381570.0 3348120.0 2546130.0 True False 2458351.3784863763 3123128.325908862 3328507.555680896 3227235.2995100515 2741868.346908752 2620481.879336771 2616739.812404905 2373308.889532616 2740185.8072367627 2523573.269059164 0.9741549447474122 1.2375817909472562 1.3189660853087999 1.2788355856666789 1.086502373648526 1.038401346006386 1.036918501431296 0.940455709620601 1.0858356445732824 1.0 21.26703654356653 -5.9532639504707054 4.272606684757011 1.0208424354790728 1.2126560681678455 0.4611914714204636 0.09235569071544951 0.19094636296850098 7.518848491460667 0.030858467754337596 0.034583578940119195 1.1136175063233345e-06 5.9532639504707054 0.19181363268877272 SHSAGRT(ph)PGRTPGK ddPTM_KYSE-520_SHP099_60min_R1 1 SHSAGRTPGRTPGK 14 2 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 S(0.01)HS(0.039)AGRT(0.95)PGRT(0.002)PGK 73.928 0.01378 843240000.0 167130.0 191330.0 206830.0 132500.0 162990.0 142300.0 119680.0 85972.0 191640.0 111100.0 True False 157858.96573460492 182138.21960781503 220162.5927397006 145092.7601624223 175816.3857137575 141411.8529164952 131778.42236424095 85673.78319801562 156843.00685126375 110115.74043449196 1.4335731214423018 1.6540616163423916 1.9993744025240032 1.317638691706734 1.5966508059613056 1.284211070629102 1.1967264792869112 0.7780339382904399 1.424346839356449 1.0 16.74866118333608 -6.374790535458923 1.2792111255762084 1.062456179528304 1.647193571299069 0.5352274000860427 0.2222306576360993 0.33479026921517024 1.1146128284351122 0.1122549658719527 0.09172097581717818 4.2189994089555675e-07 6.374790535458923 0.584737391770765 SHSES(ph)PSRLPINR ddPTM_KYSE-520_SHP099_60min_R1 2 SHSESPSRLPINR 13 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 SHS(0.092)ES(0.908)PSRLPINR;SHS(0.057)ES(0.943)PSRLPINR 207.66 8.912700000000001e-11 1167340000.0 430750.0 397180.0 375450.0 408020.0 326580.0 382570.0 301500.0 317000.0 383550.0 321610.0 True False 406855.4388211641 378098.87662066595 399652.1077412395 446798.09812431334 352279.9880139816 380182.23872286396 331978.5623564395 315900.40098835586 313906.98850867356 318760.78560879367 1.2763660311732528 1.1861524180226368 1.25376811008278 1.4016720948625605 1.1051547239136408 1.1926882348365497 1.041466131796612 0.9910265479645659 0.9847729164964569 1.0 18.282114632348907 -6.621187673710114 1.2268547564112955 0.9827051991742548 1.2617173027994697 0.7495269289248605 0.06744687597966406 0.23243370058978144 0.7121158387183629 0.04106904259974639 0.02677975748261838 2.3922817450816593e-07 6.621187673710114 0.2790121036252149 SHSGT(ph)S(ph)PDNTAPPPPPPRPQPSHSR ddPTM_KYSE-520_SHP099_60min_R1 1 SHSGTSPDNTAPPPPPPRPQPSHSR 25 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 2 S(0.001)HS(0.364)GT(0.617)S(0.861)PDNT(0.156)APPPPPPRPQPSHSR 204.41 5.628199999999999e-16 779040000.0 120900.0 165660.0 148670.0 170480.0 156420.0 155780.0 151030.0 180810.0 205590.0 148940.0 True False 114193.43599182519 157701.44493927038 158253.50608041033 186682.36794331914 168729.3640919438 154807.71923634314 166297.58631075663 180182.8123113713 168260.03850214643 147620.5074735666 0.7735607873606113 1.068289546203524 1.0720292782406788 1.264609986364849 1.1429940662015203 1.0486870820713274 1.1265208957538262 1.2205811739512913 1.139814795259904 1.0 17.17153362927192 -4.1072492831491045 1.7379428968695274 1.1387936021074292 0.5346145621283512 0.673457279573173 0.07333914164412682 0.8247302359931225 1.807645018558734 0.01999024718221938 0.9312940407943944 7.811792823555894e-05 4.1072492831491045 -0.604179039979078 SHSGTS(ph)PDNTAPPPPPPRPQPSHSR ddPTM_KYSE-520_SHP099_60min_R1 1 SHSGTSPDNTAPPPPPPRPQPSHSR 25 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.243)HS(0.243)GT(0.243)S(0.271)PDNT(0.001)APPPPPPRPQPSHSR 54.235 0.040947000000000004 303710000.0 34155.0 48909.0 38983.0 60913.0 49272.0 49657.0 48308.0 44496.0 60186.0 34366.0 True False 32260.3540636955 46559.3382260943 41495.90655500531 66702.15320583872 53149.426080669095 49347.07224367112 53191.44408064641 44341.65376144447 49257.7395655926 34061.54397634344 0.9471195459049387 1.3669180192897563 1.2182626419937164 1.9582833136444129 1.5603939186544993 1.448762049011749 1.561627509240014 1.3018098590081768 1.446139364668944 1.0 15.055856211997739 -8.87005539535456 1.0764444684506023 0.9979919283126819 1.4427922530266368 0.20457418823536655 0.24800710228381667 10.64393354289834 11.6464321217642 0.3123851252203004 0.07729609852383547 1.3487908299528937e-09 8.87005539535456 0.4448003247139549 SHSLSRPGPT(ph)EGDAEGEAEGPVGSTLGSYATLTR ddPTM_KYSE-520_SHP099_60min_R1 1 SHSLSRPGPTEGDAEGEAEGPVGSTLGSYATLTR 34 1 Q8WXE0-2;Q8WXE0 Q8WXE0-2 CASKIN2 Caskin-2 1 S(0.189)HS(0.189)LS(0.189)RPGPT(0.431)EGDAEGEAEGPVGSTLGSYATLTR 76.891 0.020198 479530000.0 54829.0 53372.0 52292.0 61589.0 76850.0 68919.0 43632.0 55141.0 106930.0 53836.0 True False 51787.526071098284 50807.92900699474 55662.82599015825 67442.40004259186 82897.65778331347 68488.85095679494 48042.74836728417 54949.72874100615 87514.20748594061 53359.0549237742 0.9705480380992333 0.9521894471252562 1.0431748851188443 1.2639354302458383 1.5535818222743352 1.2835469266581712 0.9003673029051092 1.029810756946582 1.640100403032973 1.0 15.70344549380698 -5.128857839821484 3.8014371251850827 1.2403798688326177 0.9680449548018267 0.21997862475242014 0.21884797861412583 0.3854682773299169 9.775970227377437 0.0637275209072586 0.11858582620888533 7.432623945519147e-06 5.128857839821484 -0.272334914030791 SHSS(ph)PSQIPK ddPTM_KYSE-520_SHP099_60min_R1 3 SHSSPSQIPK 10 0 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 SHS(0.206)S(0.792)PS(0.002)QIPK;SHS(0.209)S(0.722)PS(0.069)QIPK;S(0.02)HS(0.195)S(0.785)PSQIPK 152.96 0.00013197 1473730000.0 3012250.0 3075960.0 2715750.0 3356890.0 2654440.0 2546040.0 2422690.0 2592860.0 3322980.0 2468960.0 True False 2845154.487728497 2928186.264489908 2890811.5903536356 3675927.8163142223 2863329.3263023873 2530149.219954418 2667599.1483758627 2583865.9738380713 2719610.5975089357 2447086.9352218155 1.1626699676162502 1.1966008327466646 1.18132770386909 1.5021647835249543 1.1700970999801614 1.0339433321869593 1.0901121288255577 1.0558946380888825 1.1113665633879155 1.0 21.222633924842626 -6.001988126711431 24.998073866165168 1.067999825448959 1.2611550101754587 0.512358048730581 0.09307235872653326 69.33540143197456 871819.2609091073 0.030046731532455705 0.03355884179849994 9.954326313683184e-07 6.001988126711431 0.19315518472649962 SHSSPS(ph)QIPK ddPTM_KYSE-520_SHP099_60min_R1 1 SHSSPSQIPK 10 0 Q9H792;H0YN99 Q9H792 PEAK1 Pseudopodium-enriched atypical kinase 1 1 S(0.001)HS(0.034)S(0.266)PS(0.699)QIPK 75.692 0.016501 330450000.0 956310.0 909440.0 831120.0 930570.0 860650.0 861080.0 793630.0 818650.0 1154000.0 770730.0 True False 903261.5779432784 865749.1373027293 884695.3250390172 1019011.0930139278 928378.2585713568 855705.680318592 873857.8654823917 815810.2942243468 944462.6899726486 763901.9318188675 1.1824313309335304 1.1333249743738196 1.1581268330249381 1.3339553816648162 1.2153107878139116 1.1201774006267242 1.1439398554755802 1.06795160509921 1.2363664112275015 1.0 19.54302791432111 -6.265978150412874 23.38908031144916 1.1198248188259916 1.205269731206756 0.2685662684021468 0.07469493517700104 245.1026335044193 1263051.023303845 0.026149533597436266 0.023884660987134987 5.420281594415886e-07 6.265978150412874 0.08544491238076435 SHT(ph)GEKPYK ddPTM_KYSE-520_SHP099_60min_R1 4 SHTGEKPYK 9 1 Q9UEG4;M0R0E8;J9JID5;A0A2U3TZJ5;K7ELU1;D3YTK1;A0A0C4DGP9;Q6NSZ9-2;A0A087WWI3;Q9UL36;Q9UL36-2;Q6ZNA1;Q6NSZ9-3;Q9C0K0;A0A0A0MR57;Q9C0K0-2;Q9H165;Q8NEP9-4;Q9H165-2;Q8NC26-2;P0CG00;Q5MCW4;Q8NEP9;A0A0C4DFN0;Q3ZCX4-2;Q8NC26;Q8TBZ5;Q6NSZ9;Q8NEP9-2;Q9H5V7;Q5MCW4-2;Q9H165-6;Q3ZCX4;Q15776 Q9UEG4;Q15776 ZNF629;ZNF791;ZNF236;ZNF569;BCL11B;ZNF568;ZSCAN25;ZNF836;BCL11A;ZNF555;ZNF114;ZSCAN5D;ZNF502;IKZF5;ZKSCAN8 Zinc finger protein 629;Zinc finger and SCAN domain-containing protein 25;Zinc finger protein 236;Zinc finger protein 836;B-cell lymphoma/leukemia 11B;B-cell lymphoma/leukemia 11A;Zinc finger protein 555;Zinc finger protein 114;Putative zinc finger and SCAN domain-containing protein 5D;Zinc finger protein 569;Zinc finger protein 568;Zinc finger protein 502;Zinc finger protein Pegasus;Zinc finger protein with KRAB and SCAN domains 8 1 S(0.001)HT(0.999)GEKPYK;S(0.429)HT(0.571)GEKPYK;S(0.094)HT(0.906)GEKPYK;S(0.001)HT(0.999)GEKPYK 97.214 0.0081016 3037520000.0 3543490.0 3545330.0 3389840.0 3676130.0 3362150.0 3365040.0 3454590.0 3608080.0 4227840.0 3484100.0 True False 3346925.545927808 3375007.025151179 3608354.510335766 4025508.2899312135 3626732.076983307 3344037.5371617875 3803813.67074936 3595564.4126122054 3460170.8311732784 3453233.5845887833 0.9692149297008431 0.9773468670678067 1.0449204845103042 1.1657214003409437 1.0502423274141717 0.9683786095692107 1.10152226241664 1.0412166812747974 1.0020089132155596 1.0 21.719516493996267 -4.76435770829515 5.505910471293164 1.0520442875724032 0.971972668679246 0.234078450226205 0.052655440751932465 0.21662045438200256 20.95352107549842 0.014212680668459588 0.034386802908571296 1.720450935313978e-05 4.76435770829515 -0.08007161889315717 SHTCFNR ddPTM_KYSE-520_SHP099_60min_R1 1 SHTCFNR 7 0 O00308-2;O00308;O00308-3;Q9H0M0-6;Q9H0M0-3;Q9H0M0;A0A590UK44;A0A590UJW8;A0A590UJQ1;Q96J02-3;Q96J02-2;Q96J02 O00308-2;A0A590UK44 WWP2;WWP1;ITCH NEDD4-like E3 ubiquitin-protein ligase WWP2;NEDD4-like E3 ubiquitin-protein ligase WWP1;E3 ubiquitin-protein ligase Itchy homolog 0 68.78699999999999 0.050709 339530000.0 115540.0 134850.0 103570.0 99951.0 124560.0 141390.0 94998.0 126910.0 127100.0 94002.0 False True 109130.7658767202 128371.6035860233 110246.28791785923 109450.31298863597 134362.1633505468 140507.5325640425 104601.32493113444 126469.77883101662 104021.84393026304 93169.21541244943 1.1713178585180826 1.3778328283407446 1.1832909339185862 1.1747476084682262 1.4421304586041743 1.5080896832932615 1.1227026488103005 1.357420240914871 1.1164829871086739 1.0 16.507565723824612 -7.94991120811525 4.182205123702379 1.0011423829220962 1.2935199545399632 0.384026285946349 0.12260309765408062 0.19091701300735775 6.960938238998174 0.11970539834194227 0.03144614310186679 1.1222478754032043e-08 7.94991120811525 0.2923775716178669 SHTEEDCTEELFDFLHAR ddPTM_KYSE-520_SHP099_60min_R1 6 SHTEEDCTEELFDFLHAR 18 0 P07919 P07919 UQCRH Cytochrome b-c1 complex subunit 6, mitochondrial 0 ;;;;; 397.32 6.031899999999998e-87 2237365000.0 667858.0 911068.0 481844.0 657449.0 1075424.0 999551.0 837411.0 617092.0 653361.0 527030.0 False True 630810.5853980836 867298.9257390511 512904.435217659 719932.7552907513 1160053.7504744572 993312.4314443821 922064.6762237753 614951.4518823563 534727.1122904847 522360.9242231357 1.2076144216496212 1.660344190233818 0.9818966378093067 1.3782285808637924 2.220789681386887 1.9015825751546285 1.7651869300811234 1.1772539318420934 1.0236736468864707 1.0 18.9946874529865 -7.417391667903708 4.515747169450935 1.0351307352060495 1.5943286547595028 0.34778778647770825 0.33100955238172325 0.2884536662607178 9.509637023610248 0.21904328499736528 0.09761481068570228 3.824796489635705e-08 7.417391667903708 0.5591979195534533 SHTPS(ph)PTSPK ddPTM_KYSE-520_SHP099_60min_R1 2 SHTPSPTSPK 10 0 E9PDI2;P40123;B7Z385;A0A087X0J3;A0A087WZ15;P40123-2 E9PDI2 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 SHTPS(0.998)PT(0.001)SPK;SHT(0.002)PS(0.996)PT(0.001)SPK 89.44 0.0024910999999999996 1049430000.0 1687600.0 1569640.0 1504330.0 1471110.0 1460040.0 1654870.0 1442710.0 1589070.0 1889750.0 1644400.0 True False 1593985.4638528056 1494232.1383223257 1601301.5188131006 1610923.8520946507 1574936.8415087683 1644541.3424871406 1588553.206292732 1583557.887061728 1546619.0367208095 1629831.8953238425 0.9780060559779913 0.9168013846148387 0.9824948961959828 0.9883987770251392 0.9663185792519008 1.0090251314908616 0.9746730388885237 0.9716081097720081 0.9489439009987598 1.0 20.636291738510927 -4.806567476868154 24.996909047004916 0.9798004185507548 0.9474035541968487 0.278821146827992 0.021079839035834658 137.75853582095553 76305.36394813308 0.005300900551971228 0.011034790079931649 1.5611064680926946e-05 4.806567476868154 -0.032396864353906096 SHTPSPTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 SHTPSPTSPK 10 0 E9PDI2;P40123;B7Z385;A0A087X0J3;A0A087WZ15;P40123-2 E9PDI2 CAP2 Adenylyl cyclase-associated protein;Adenylyl cyclase-associated protein 2 1 SHTPSPT(0.178)S(0.822)PK;SHTPS(0.001)PT(0.067)S(0.932)PK;SHTPS(0.001)PT(0.072)S(0.927)PK;SHTPSPT(0.014)S(0.986)PK;SHTPSPT(0.009)S(0.991)PK 116.81 0.00038085 21729000000.0 12109000.0 13067200.0 11509700.0 13426300.0 12230400.0 12696700.0 11642500.0 13166900.0 14992900.0 12147700.0 True False 11437289.631306946 12439432.097732935 12251633.678171111 14702331.51523571 13192862.898543077 12617455.185698263 12819437.519850228 13121227.097077549 12270567.30025209 12040080.82876758 0.9499346220317413 1.0331684873751992 1.0175707167096473 1.221115682222595 1.0957453763118543 1.0479543588736673 1.0647301876263584 1.0897955988573405 1.0191432661260713 1.0 23.521341741597418 -4.468216911133946 1.855388584046022 1.0790554164051445 0.9416306183183742 0.2750253313883234 0.05888280451680957 0.7011066301657725 3.432073897491946 0.016564951571077374 0.14529510086286704 3.4023821312273924e-05 4.468216911133946 -0.13742479808677022 SHTS(ph)LKDELSDVSQGGSK ddPTM_KYSE-520_SHP099_60min_R1 2 SHTSLKDELSDVSQGGSK 18 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9 A0A087X2D8 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 SHT(0.003)S(0.997)LKDELSDVSQGGSK;SHT(0.099)S(0.901)LKDELSDVSQGGSK 222.46 1.1886e-18 1895380000.0 1006900.0 1140760.0 964870.0 1082260.0 1082230.0 986290.0 1036260.0 1031080.0 1183280.0 909230.0 True False 951045.2497946135 1085956.1772843308 1027067.0640465834 1185117.6650066653 1167395.343953615 980134.1982643018 1141015.2737229997 1027503.4241358816 968426.1800613825 901174.9295702365 1.0553392228167728 1.2050448161071403 1.1396977771412082 1.3150805976946551 1.2954148031063593 1.087618137281871 1.2661418291642237 1.1401819895565561 1.0746261888612654 1.0 19.781447653203458 -7.822204831580481 2.0222579658486675 1.003752032017004 1.1980181885066523 0.3855736818839487 0.08052179769848294 0.31293388097403685 2.57334540199941 0.07656218061871005 0.021939395233836756 1.5058966543434477e-08 7.822204831580481 0.1942661564896484 SHVEDGDIAGAPASS(ph)PEAPPAEQDPVQLK ddPTM_KYSE-520_SHP099_60min_R1 4 SHVEDGDIAGAPASSPEAPPAEQDPVQLK 29 0 Q9P2E9;A0A087WVV2;Q9P2E9-3;F8W7S5;A0A087WU26 Q9P2E9 RRBP1 Ribosome-binding protein 1 1 SHVEDGDIAGAPAS(0.25)S(0.75)PEAPPAEQDPVQLK;SHVEDGDIAGAPAS(0.207)S(0.793)PEAPPAEQDPVQLK;SHVEDGDIAGAPAS(0.153)S(0.847)PEAPPAEQDPVQLK;SHVEDGDIAGAPAS(0.106)S(0.894)PEAPPAEQDPVQLK 213.52 1.8966999999999998e-22 3472770000.0 1828100.0 2248470.0 1657000.0 1642100.0 1746910.0 2097710.0 1697110.0 2169510.0 2578610.0 2147870.0 True False 1726691.6487730006 2140450.126177725 1763812.8712937394 1798164.6902846345 1884381.8784417447 2084617.4137839838 1868670.4409974713 2161984.476177438 2110399.4254682623 2128841.542817572 0.8110944915551034 1.0054530048980483 0.8285317792884159 0.8446681700436571 0.8851677499433428 0.9792261997221942 0.877787474273093 1.0155685299695911 0.9913370173503373 1.0 21.021637138231796 -6.986890831576697 0.956773012708294 1.0088352298264385 0.8798273610482737 0.41602528643007697 0.05928123552298445 0.5868411878389971 0.9990352776180172 0.048258899362763806 0.02320809635096032 1.0306451607282581e-07 6.986890831576697 -0.12900786877816472 SHVTEEEEEEEEEES(ph)DS ddPTM_KYSE-520_SHP099_60min_R1 3 SHVTEEEEEEEEEESDS 17 0 O75971-2;O75971 O75971-2 SNAPC5 snRNA-activating protein complex subunit 5 1 SHVTEEEEEEEEEES(0.5)DS(0.5);SHVTEEEEEEEEEES(0.5)DS(0.5);SHVTEEEEEEEEEES(0.5)DS(0.5) 372.86 2.6060999999999996e-72 304780000.0 216097.0 253297.0 203636.0 268437.0 220456.0 218795.0 217135.0 236518.0 251224.0 208203.0 True False 204109.6686313105 241128.23191345183 216762.70238911978 293949.1717714728 237804.63297694377 217429.41924711558 239085.1248333846 235697.57426171625 205608.05444167144 206358.48339948317 0.9891023875969311 1.1684919754263698 1.0504181791717058 1.4244588685139028 1.1523860277485416 1.053649046384008 1.1585912093109683 1.142175356103177 0.996363469311029 1.0 17.65479322320962 -7.755879978389186 7.338255530692137 0.9970862306427181 1.1477342906447061 0.21510747402913788 0.10984480757207987 0.18302179009825967 60.45428566337331 0.08695218323518686 0.028239023240108938 1.7543652711902985e-08 7.755879978389186 0.15064806000198805 SIDKDEEFAGSS(ph)PQSSK ddPTM_KYSE-520_SHP099_60min_R1 1 SIDKDEEFAGSSPQSSK 17 1 A0A590UJ38;H3BQ24;A0A590UJL5;Q9Y2M0-2;Q9Y2M0 A0A590UJ38 FAN1 Fanconi-associated nuclease 1 1 SIDKDEEFAGS(0.217)S(0.783)PQSSK 120.32 9.6169e-05 0.0 307850.0 296330.0 260390.0 266070.0 279250.0 239390.0 267550.0 276650.0 344360.0 272840.0 True False 290772.94681623974 282093.8619996021 277175.156038731 291357.2128031373 301225.3862848441 237895.8782127884 294596.56503636943 275690.3657205956 281832.90460916917 270422.8498663078 1.0752528751175896 1.043158380066863 1.0249694364797997 1.0774134395343407 1.1139050802613923 0.8797181093624294 1.0893922802086164 1.019478812004577 1.0421933825063314 1.0 18.044857534326262 SIDPDS(ph)IQSALLASGLGSK ddPTM_KYSE-520_SHP099_60min_R1 1 SIDPDSIQSALLASGLGSK 19 0 A3KN83-3;A3KN83-2;A3KN83 A3KN83-3 SBNO1 Protein strawberry notch homolog 1 1 S(0.2)IDPDS(0.768)IQS(0.031)ALLASGLGSK 96.56200000000001 0.00034338 18395000.0 54465.0 60709.0 52339.0 50197.0 46666.0 56729.0 46979.0 57341.0 69228.0 59834.0 True False 51443.717876714254 57792.44851393319 55712.85568536088 54967.70778772162 50338.348706780824 56374.93326844588 51728.09579085629 57142.09745449004 56657.94029586349 59303.91731014757 0.8674590180556531 0.974513171055637 0.939446468502137 0.9268815666973829 0.8488199597932355 0.9506106143649214 0.8722542816240747 0.9635467612644938 0.9553827616404132 1.0 15.85583978444325 -7.7553019035434305 1.6893311096373598 0.9942599701887669 0.91501640171342 0.3344877327767234 0.03913312992699265 0.4129800594739486 2.3117709399795707 0.03597272796569088 0.01076718612843721 1.7567020028986342e-08 7.7553019035434305 -0.07924356847534686 SIFAS(ph)PESVTGK ddPTM_KYSE-520_SHP099_60min_R1 9 SIFASPESVTGK 12 0 O75940 O75940 SMNDC1 Survival of motor neuron-related-splicing factor 30 1 SIFAS(1)PESVTGK;SIFAS(0.994)PES(0.006)VTGK;SIFAS(0.964)PES(0.036)VTGK;SIFAS(0.999)PES(0.001)VTGK;SIFAS(1)PESVTGK;SIFAS(0.999)PES(0.001)VTGK;SIFAS(0.999)PES(0.001)VTGK;SIFAS(0.986)PES(0.014)VTGK;SIFAS(0.998)PES(0.002)VTGK 240.37 2.5374e-15 6551630000.0 11895860.0 12492620.0 10493450.0 8587510.0 8960470.0 10428720.0 9352780.0 10849810.0 12912650.0 11480490.0 True False 11235972.931991009 11892455.783395084 11169874.577113645 9403664.36847097 9665608.01089977 10363630.490142735 10298250.276736533 10812174.541474704 10568038.261417102 11378781.790286066 0.9874495476820752 1.045143144721128 0.981640634558019 0.8264210125286672 0.849441371584363 0.9107855903335844 0.9050397895430273 0.9502049288531863 0.928749531908496 1.0 23.43984277553013 -5.0196573242510265 17.939091555867755 0.905209625478767 1.0155709657316125 0.46274662102966113 0.04751643029287649 15.795129700371291 14416.752092869876 0.013158721002142892 0.023482642871246146 9.557464107994859e-06 5.0196573242510265 0.1103613402528455 SIFKPFIFVDDVK ddPTM_KYSE-520_SHP099_60min_R1 1 SIFKPFIFVDDVK 13 1 Q12765-3;Q12765;Q12765-2 Q12765-3 SCRN1 Secernin-1 0 118.52 0.00012208 126170000.0 125810.0 126910.0 91181.0 90153.0 157720.0 118360.0 79054.0 84598.0 103580.0 68650.0 False True 118831.06850398277 120813.05310420631 97058.67315475823 98721.11401451222 170131.66669595556 117621.27133658735 87045.54981268979 84304.54928332168 84772.4830393129 68041.81440889189 1.746441795186073 1.7755707156512588 1.4264562754234011 1.4508889110636514 2.5003987353065393 1.7286615937334011 1.2792949536823996 1.2390108937527764 1.2458880436356292 1.0 16.05413399209409 -6.78090881477257 4.547484022147979 1.2001064605546445 1.7774874936215743 0.5053347144588695 0.2825195422312606 0.18845391713244297 9.331090088809706 0.12691527110652345 0.08816409279758165 1.656117648319992e-07 6.78090881477257 0.5773810330669298 SIFS(ph)SEK ddPTM_KYSE-520_SHP099_60min_R1 5 SIFSSEK 7 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 SIFS(0.97)S(0.03)EK;SIFS(0.998)S(0.002)EK;SIFS(0.999)S(0.001)EK;SIFS(0.992)S(0.008)EK;SIFS(0.997)S(0.003)EK 134.23 0.0018613 1390950000.0 3024730.0 2740200.0 2640540.0 2529930.0 2589790.0 2588540.0 2405860.0 2445070.0 3215460.0 2549760.0 True False 2856942.1972502307 2608556.678875943 2810753.4334133794 2770373.7865488124 2793591.73911057 2572383.9616898433 2649067.807730892 2436588.6228536256 2631613.519150303 2527171.1100832624 1.1304902093297922 1.0322042177785102 1.1122133448734992 1.09623514430629 1.105422473359364 1.0178906966078334 1.04823444568564 0.9641565674487896 1.041327794801991 1.0 21.269091919127707 -6.26950893739024 22.671960861647552 1.0142011994937048 1.0927971610489102 0.6148103983282545 0.03202240350704689 117.26497552752167 329461.44944112416 0.010749739486051322 0.00967182168925542 5.37639368873246e-07 6.26950893739024 0.07859596155520543 SIGAAS(ph)PRPQSLEK ddPTM_KYSE-520_SHP099_60min_R1 1 SIGAASPRPQSLEK 14 1 Q96L73-2;Q96L73;Q96L73-3 Q96L73-2 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific 1 S(0.007)IGAAS(0.993)PRPQSLEK 90.654 0.0016389 667750000.0 567750.0 633170.0 499810.0 418830.0 517890.0 585340.0 471250.0 598530.0 663770.0 566170.0 True False 536255.775718434 602751.5627924545 532028.5523242754 458635.4772741693 558644.9966089816 581686.6759391517 518888.54895679007 596453.8391279518 543246.1002800212 561154.1742735952 0.9556300216649163 1.0741282706712578 0.9480969343460334 0.8173074322540063 0.9955285413890725 1.036589769098903 0.9246809036544773 1.0629054660424675 0.968087069802598 1.0 19.09803767290346 -5.959440173870254 24.999742449793594 0.9998058222480338 0.9512843874872572 0.11364488983750642 0.06712226363255805 380.5930201047971 234583.41742317684 0.02187778680956825 0.024807056015521453 1.0978925197717387e-06 5.959440173870254 -0.04852143476077664 SIGS(ph)PESTPK ddPTM_KYSE-520_SHP099_60min_R1 2 SIGSPESTPK 10 0 H0Y6F6;A0A0A0MRJ3;Q8NEY1-6;Q8NEY1-5;Q8NEY1-7;Q8NEY1-4;Q8NEY1-2;Q8NEY1-3;Q8NEY1 H0Y6F6 NAV1 Neuron navigator 1 1 SIGS(0.973)PES(0.023)T(0.004)PK;SIGS(1)PESTPK 162.93 6.8678e-05 538780000.0 1730440.0 1540070.0 1413080.0 1217880.0 1362690.0 1460620.0 1413140.0 1509400.0 1755880.0 1497750.0 True False 1634449.043653381 1466082.7255078026 1504169.3978079392 1333626.9490310259 1469925.950354499 1451503.7287905205 1555993.982117343 1504164.2436966079 1437056.4541327327 1484481.1002318684 1.1010238145828117 0.9876061913343376 1.0132627472138214 0.8983792039000834 0.9901951261790427 0.97778525342209 1.0481736560164387 1.0132592752185696 0.9680530482390592 1.0 20.50152729499948 -4.2611491789224445 23.065436622573163 0.9884749568962964 1.1010238958394976 0.45620170235458113 0.03684798639794284 7.729156499885928 613370.4297898274 0.009549196115910135 0.05394660004028854 5.480886656808387e-05 4.2611491789224445 0.11254893894320117 SIITYVSS(ph)LYDAMPR ddPTM_KYSE-520_SHP099_60min_R1 1 SIITYVSSLYDAMPR 15 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 SIITY(0.002)VS(0.076)S(0.523)LY(0.398)DAMPR 69.721 0.023657 7717900.0 16123.0 21952.0 18917.0 11943.0 12937.0 15677.0 12194.0 15259.0 22939.0 17383.0 True False 15228.625049596329 20897.392969376244 20136.420088270155 13078.05912920611 13955.068298539047 15579.15402791211 13426.688521971555 15206.070090477382 18773.855845132235 17229.000143769354 0.8838948820314199 1.2129196584244917 1.168751518964508 0.759072437174227 0.809975516982378 0.9042401705212192 0.779307470539847 0.8825857544598409 1.0896660101266271 1.0 14.072551359145919 -5.253493255962947 24.961573992293236 0.8771104571317031 1.10096178992817 0.3481562877105847 0.12381489411439829 598.010274721419 1878556.606093642 0.033722694939321306 0.05708547680811627 5.578362645566464e-06 5.253493255962947 0.22385133279646696 SIITYVSSLY(ph)DAMPR ddPTM_KYSE-520_SHP099_60min_R1 1 SIITYVSSLYDAMPR 15 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 SIITYVS(0.042)S(0.313)LY(0.644)DAMPR 175.74 4.0807e-08 7587300.0 23112.0 31060.0 29943.0 15316.0 21310.0 23731.0 14078.0 18234.0 41563.0 19793.0 True False 21829.931287370233 29567.83097798951 31873.173690493946 16771.628035076694 22986.97576268586 23582.886026432505 15501.141628039664 18170.750509847603 34016.20691796639 19617.64941872098 1.1127699767403372 1.5072055956802421 1.6247193030209628 0.8549254641624726 1.171749747997309 1.2021259796766237 0.7901630464069278 0.9262450420032172 1.7339593644437836 1.0 14.259864568144778 -5.257994237214836 24.9882852940603 1.0886579079117888 1.4241290117754914 0.21805583363562264 0.2753623333890402 446.0028126786037 3234931.154555011 0.07542833120690053 0.12410936109128853 5.520847650122993e-06 5.257994237214836 0.3354711038637026 SIKPSDS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 11 SIKPSDSPR 9 1 Q92610;H0YM74 Q92610 ZNF592 Zinc finger protein 592 1 S(0.002)IKPS(0.05)DS(0.947)PR;SIKPS(0.004)DS(0.996)PR;S(0.004)IKPS(0.28)DS(0.717)PR;SIKPS(0.047)DS(0.953)PR;SIKPS(0.081)DS(0.919)PR;SIKPS(0.047)DS(0.953)PR;SIKPS(0.052)DS(0.948)PR;SIKPS(0.032)DS(0.968)PR;SIKPS(0.153)DS(0.847)PR;SIKPS(0.006)DS(0.994)PR;SIKPS(0.016)DS(0.983)PR 107.65 0.00082785 24117820000.0 44511910.0 40303540.0 37963830.0 37261940.0 40548180.0 39255620.0 39015880.0 40677110.0 46744460.0 38696020.0 True False 42042745.62000728 38367297.441553116 40411039.226075634 40803303.574389264 43739091.07841501 39010611.11444712 42959985.90869445 40536010.59951887 38256844.39594356 38353203.36784803 1.0961990636550645 1.000367481004648 1.0536548626327447 1.0638825441265536 1.1404286275362863 1.0171408823480492 1.1201146745595791 1.05691329641322 0.9974875899939756 1.0 25.192843744935924 -7.722033030621727 4.867140441639319 0.997675374223459 1.0686026232266328 0.3283816305134801 0.04020590923369465 0.21627230299685155 11.420209427601481 0.031190765003362604 0.010180596954466504 1.896561671177915e-08 7.722033030621727 0.07092724900317382 SILAKPS(ph)SSPDPR ddPTM_KYSE-520_SHP099_60min_R1 1 SILAKPSSSPDPR 13 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 SILAKPS(0.333)S(0.333)S(0.333)PDPR 61.11 0.055101 438910000.0 422550.0 383410.0 356710.0 351530.0 341230.0 324190.0 376550.0 347340.0 421530.0 393140.0 True False 399110.3091674584 364990.4080898569 379704.0973561795 384939.3055086519 368082.85966688447 322166.60995782545 414615.34877385566 346135.15860976535 344990.7779065602 389657.0854582918 1.0242603665170062 0.93669644852108 0.974457058594466 0.9878924825809566 0.944632789710386 0.8267952052736626 1.0640518657224196 0.8883071077808362 0.8853702159702865 1.0 18.571845524738414 -5.913756136423318 6.07368673702643 0.9290753439985847 0.9766599469688 0.10827869391516243 0.0642680910110519 0.49322282786415284 27.805687080844162 0.019682979956956014 0.022384836395045096 1.2196742740745048e-06 5.913756136423318 0.04758460297021527 SILAKPSS(ph)SPDPR ddPTM_KYSE-520_SHP099_60min_R1 1 SILAKPSSSPDPR 13 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 SILAKPS(0.04)S(0.594)S(0.366)PDPR 116.84 0.00019016 703350000.0 496990.0 482610.0 446290.0 315600.0 396900.0 396030.0 377200.0 379160.0 502040.0 417500.0 True False 469420.9739749974 459424.6911876216 475058.56748924707 345594.5291114001 428133.77194791316 393558.2298701301 415331.0571172438 377844.78245660954 410882.1913985001 413801.27481008467 1.1344116186941173 1.1102544123347033 1.1480355339825297 0.8351702861959807 1.0346361841065048 0.9510802741019945 1.0036969009045738 0.9131068593977206 0.9929456877267373 1.0 18.658578564195764 -5.234631633805404 24.99537712909728 0.9622678598517911 1.128835944992899 0.6768320274933053 0.05362754858965415 410.60893265654835 382848.7956105377 0.013544836007810345 0.023452298121721865 5.825971639751453e-06 5.234631633805404 0.166568085141108 SILAKPSSS(ph)PDPR ddPTM_KYSE-520_SHP099_60min_R1 1 SILAKPSSSPDPR 13 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 SILAKPS(0.017)S(0.168)S(0.815)PDPR 160.8 1.7165e-06 658800000.0 563520.0 484020.0 444730.0 358960.0 424170.0 409780.0 382890.0 441150.0 597200.0 445920.0 True False 532260.4222507301 460766.9526711679 473398.00739315903 393075.450474741 457549.7658028369 407222.4110198269 421596.25784629263 439619.75361518434 488763.53418688517 441969.4957205108 1.204292213386864 1.0425311183976917 1.071110137638374 0.8893723532524312 1.0352519127070676 0.921381260387579 0.953903520330051 0.9946834744748712 1.1058761722686075 1.0 18.753587274163436 -4.014204633049068 1.2287232004785271 0.9862218114051251 1.408082115117782 0.5193369500124205 0.0607797592573616 1.949573221825502 1.705690595408649 0.01794550328250379 1.2027933596785774 9.678217257208685e-05 4.014204633049068 0.4218603037126569 SILCCLR ddPTM_KYSE-520_SHP099_60min_R1 1 SILCCLR 7 0 A0A087WYT3;Q15185-4;Q15185;Q15185-3 A0A087WYT3 PTGES3 Prostaglandin E synthase 3 0 144.58 0.011518 260480000.0 300790.0 387990.0 230260.0 215130.0 294980.0 331620.0 273420.0 241450.0 297500.0 235340.0 False True 284104.5790900007 369350.3780151366 245102.9280290261 235575.8905188072 318193.24779338745 329550.2365718067 301059.96192204877 240612.46630485388 243481.49936469912 233255.0706917496 1.2179995840924271 1.5834613023407287 1.0507935681832772 1.0099497079320714 1.3641428966570466 1.4128320365961637 1.2906898916675833 1.0315422751209007 1.043842256644718 1.0 17.8315489183534 -7.263995855147459 22.685368588995633 1.0282691188897075 1.2773379520166561 0.34777595928317817 0.15721825021239716 78.37526896983162 695442.8296517561 0.08650458345745639 0.04468364091793133 5.4450784953284204e-08 7.263995855147459 0.2490688331269486 SILDADPEAQALLEIS(ph)GHSR ddPTM_KYSE-520_SHP099_60min_R1 1 SILDADPEAQALLEISGHSR 20 0 Q6P9B6 Q6P9B6 TLDC1 TLD domain-containing protein 1 1 SILDADPEAQALLEIS(0.872)GHS(0.128)R 100.7 0.00053918 112380000.0 151110.0 180040.0 180200.0 128170.0 147260.0 144710.0 159780.0 177100.0 216300.0 183220.0 True False 142727.62706968325 171390.60815445037 191815.9803301942 140351.23826428442 158848.52420521446 143806.811212551 175932.1217025272 176485.68143545056 177025.37247927557 181596.81334300287 0.7859588747303462 0.9437974433544996 1.0562739334411624 0.7728728036608595 0.8747318924874464 0.7919016229702581 0.9688062167160603 0.971854506621224 0.9748264257528975 1.0 17.470379360906037 -6.914224886523017 11.541905298669782 0.9780706298107137 0.8784000624174129 0.3034281761913893 0.07976423338130999 0.7070466205257512 90.81033800684274 0.03486331452770305 0.023501980949406757 1.2183585446978468e-07 6.914224886523017 -0.09967056739330082 SILKPSTPIPPQEGEEVGES(ph)SEEQDNAPK ddPTM_KYSE-520_SHP099_60min_R1 10 SILKPSTPIPPQEGEEVGESSEEQDNAPK 29 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;A0A3B3ISZ5;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 SILKPSTPIPPQEGEEVGES(0.5)S(0.5)EEQDNAPK;SILKPSTPIPPQEGEEVGES(0.87)S(0.13)EEQDNAPK;SILKPSTPIPPQEGEEVGES(0.76)S(0.24)EEQDNAPK;SILKPSTPIPPQEGEEVGES(0.5)S(0.5)EEQDNAPK;SILKPSTPIPPQEGEEVGES(0.817)S(0.183)EEQDNAPK;SILKPSTPIPPQEGEEVGES(0.5)S(0.5)EEQDNAPK;SILKPSTPIPPQEGEEVGES(0.5)S(0.5)EEQDNAPK;SILKPSTPIPPQEGEEVGES(0.89)S(0.11)EEQDNAPK;SILKPSTPIPPQEGEEVGES(0.819)S(0.181)EEQDNAPK;SILKPSTPIPPQEGEEVGES(0.5)S(0.5)EEQDNAPK 274.5 1.1661e-41 5489020000.0 8906660.0 8330540.0 6566880.0 5891140.0 6199370.0 8333550.0 6724850.0 8451540.0 9408160.0 8382390.0 True False 8412589.814813472 7930328.3540045265 6990191.592179508 6451032.174364176 6687225.149409755 8281537.223276581 7404663.466211286 8422223.580344256 7699875.304413412 8308128.54600074 1.0125733813859943 0.954526438787701 0.8413677705485619 0.7764723594063179 0.8049015024723908 0.9967993607011583 0.8912552839322219 1.0137329404223576 0.9267881763962209 1.0 22.98609210751481 -6.2760880985138785 24.97479689652594 0.9619197198712671 0.8745494927714863 0.2665865068522876 0.07252371994163528 1266.6838862763773 2159579.4321992197 0.027941303416384233 0.024749231710818588 5.295560102684469e-07 6.2760880985138785 -0.08737022709978082 SILKPSTPIPPQEGEEVGESS(ph)EEQDNAPK ddPTM_KYSE-520_SHP099_60min_R1 1 SILKPSTPIPPQEGEEVGESSEEQDNAPK 29 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;A0A3B3ISZ5;A0A3B3IS03 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 SILKPSTPIPPQEGEEVGES(0.43)S(0.57)EEQDNAPK 103.78 0.0010484000000000001 1148500000.0 800750.0 800230.0 630130.0 557370.0 602600.0 733560.0 602640.0 726040.0 893560.0 652730.0 True False 756330.8012444506 761785.749630282 670749.1880436476 610342.277220599 650021.1916750127 728981.5799397337 663560.7323996171 723521.5366990098 731312.0288145236 646947.3200162557 1.1690763341062242 1.17750816188734 1.0367910450989948 0.9434188199516199 1.0047513476965633 1.1268020708725044 1.025679698901827 1.1183623678676495 1.1304042944271693 1.0 19.303288714868582 -4.75914088547654 24.991427185437313 1.0492015381725064 1.1732922978160298 0.42568419234855603 0.05807615198922166 58.63704361971367 637517.7000986205 0.01625511652549394 0.03894749114716339 1.741241921492129e-05 4.75914088547654 0.12409075964352345 SILPYPVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 SILPYPVSPK 10 0 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 SILPYPVS(1)PK;SILPYPVS(1)PK;SILPYPVS(1)PK;SILPYPVS(1)PK;SILPYPVS(1)PK 177.1 2.3777e-05 4587250000.0 6759930.0 6912950.0 5746710.0 5009850.0 4976850.0 5746270.0 5564010.0 6960390.0 7262980.0 6694330.0 True False 6384943.207313637 6580841.505450511 6117152.121661095 5485984.63773367 5368499.780597047 5710405.397459366 6126474.430304656 6936246.031657245 5944205.916826298 6635023.444309926 0.9623090650552633 0.9918339491466485 0.921948833037968 0.8268221934375153 0.8091154199614734 0.8606458508231053 0.9233538482156545 1.0453988730975234 0.8958831821346375 1.0 22.661670132572983 -7.0119442031997385 23.20434730815763 0.979259911792783 0.8938227398787737 0.2669476813663786 0.06293564391020266 331.955876077272 644897.6473655549 0.03124448723344978 0.019326939008124544 9.728722073343861e-08 7.0119442031997385 -0.08543717191400935 SILS(ph)PGGSCGPIK ddPTM_KYSE-520_SHP099_60min_R1 6 SILSPGGSCGPIK 13 0 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347;P78347-5 A0A494C1K3 GTF2I General transcription factor II-I 1 SILS(0.992)PGGS(0.008)CGPIK;SILS(0.998)PGGS(0.002)CGPIK;SILS(0.998)PGGS(0.002)CGPIK;SILS(1)PGGSCGPIK;SILS(1)PGGSCGPIK;SILS(1)PGGSCGPIK 209.11 4.0330999999999994e-11 6503060000.0 6894480.0 7775850.0 5559040.0 5017100.0 5353660.0 6716390.0 5295970.0 7016680.0 7992670.0 7091230.0 True False 6512029.450594854 7402286.494211196 5917384.613178478 5493923.675553877 5774962.583841428 6674470.518691624 5831338.33128634 6992340.774785417 6541402.6068142885 7028407.219093461 0.9265299018110663 1.0531954486219937 0.8419239848686108 0.7816740698559717 0.8216602145864701 0.94964197586043 0.8296813416622834 0.9948684754335143 0.9307091070426071 1.0 22.744766351442657 -7.2766052542137345 24.626267909144772 0.9720916002514054 0.8869621716700845 0.22565153167469243 0.07536412119567916 1219.3517847493983 1979964.1388690528 0.044525321044646224 0.021528086879750878 5.289257929207269e-08 7.2766052542137345 -0.08512942858132089 SILVS(ph)PTGPSR ddPTM_KYSE-520_SHP099_60min_R1 5 SILVSPTGPSR 11 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 SILVS(0.941)PT(0.058)GPS(0.001)R;SILVS(0.981)PT(0.019)GPSR;SILVS(0.996)PT(0.004)GPSR;SILVS(0.979)PT(0.021)GPSR;SILVS(0.997)PT(0.003)GPSR 196.78 5.116300000000001e-07 7960290000.0 3477020.0 3605370.0 2985960.0 2434000.0 2521780.0 3557600.0 2886530.0 3592360.0 4265430.0 3867730.0 True False 3284142.769332473 3432162.613429304 3178439.7593049197 2665326.6281912136 2720229.7390345354 3535395.6987752835 3178328.6222180254 3579898.9416231313 3490935.434740068 3833464.9212484094 0.8567034880452112 0.8953160349545035 0.8291297363091108 0.6952787316293535 0.7096007906467716 0.922245480630078 0.8291007450207653 0.9338546237322287 0.9106475490072325 1.0 21.87021754760983 -7.398994394215608 0.9771369767934128 0.9826498291758297 0.8074969087091806 0.44777555696969407 0.06826184752217368 0.5607451055651297 0.9688227867591239 0.06866492014681382 0.026456125467831278 3.9903005292725264e-08 7.398994394215608 -0.1751529204666491 SIMVQS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 6 SIMVQSPEK 9 0 Q14191 Q14191 WRN Werner syndrome ATP-dependent helicase 1 SIMVQS(1)PEK;SIMVQS(1)PEK;SIMVQS(1)PEK;SIMVQS(1)PEK;SIMVQS(1)PEK;SIMVQS(1)PEK 230.81 5.8472e-10 5085110000.0 8918130.0 8992610.0 7094140.0 6520076.0 7035810.0 8601570.0 7171830.0 8371080.0 9550710.0 8609530.0 True False 8423423.551048608 8560591.517417204 7551439.615425327 7139742.062707673 7589488.218717169 8547884.411039624 7896828.566715706 8342042.677304752 7816541.817806487 8533256.262312977 0.987128862899683 1.0032033791396788 0.8849423225195016 0.836696079811907 0.8894011834891273 1.001714251661614 0.9254179558150567 0.9775919556227654 0.9160092674502405 1.0 23.024664943581165 -6.250763929326986 24.96944747166836 0.9603256389689726 0.9182754051646659 0.14728265784668682 0.05226973091346295 1667.3000353178625 3899749.9866924095 0.019136684389107046 0.018930517841447708 5.613530293606285e-07 6.250763929326986 -0.042050233804306725 SINKLDS(ph)PDPFK ddPTM_KYSE-520_SHP099_60min_R1 8 SINKLDSPDPFK 12 1 P42566;B1AUU8;P42566-2 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 SINKLDS(1)PDPFK;S(0.002)INKLDS(0.998)PDPFK;SINKLDS(1)PDPFK;SINKLDS(1)PDPFK;S(0.037)INKLDS(0.963)PDPFK;SINKLDS(1)PDPFK;SINKLDS(1)PDPFK;SINKLDS(1)PDPFK 125.98 6.1071e-05 6223560000.0 12973000.0 10685200.0 9888450.0 10533350.0 11711500.0 14413200.0 13365300.0 14981800.0 18012200.0 14753500.0 True False 12253361.828965649 10171866.953187821 10525875.309079412 11534436.417032847 12633128.420680214 14323241.872494929 14716394.95675794 14929831.632578418 14741638.530611228 14622795.46804933 0.8379630184761271 0.6956171257002982 0.7198264744985561 0.7887983144013387 0.8639338796937617 0.9795146149579317 1.0064009298983305 1.0209970908230206 1.00812724645035 1.0 23.80171580466524 -6.044885171229429 1.6435638512726078 1.0120025181812382 0.7460611340406195 0.9142990341887904 0.03526411267111617 0.0958078159829756 0.5225735950764706 0.013986425127929344 0.014974769004560646 9.018095472500308e-07 6.044885171229429 -0.26594138414061874 SINKLDS(ph)PDPFKLNDPFQPFPGNDS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SINKLDSPDPFKLNDPFQPFPGNDSPK 27 2 P42566;B1AUU8;P42566-2 P42566 EPS15 Epidermal growth factor receptor substrate 15 2 S(0.017)INKLDS(0.983)PDPFKLNDPFQPFPGNDS(1)PK 202.1 4.5798e-16 387510000.0 429670.0 393650.0 408960.0 297350.0 391840.0 449050.0 391130.0 407510.0 711960.0 452480.0 True False 405835.34857408993 374738.46311930387 435322.2159591351 325610.05459846224 422675.5787353741 446247.31238336046 430669.2374609426 406096.4429235489 582686.0110510639 448471.3792241136 0.9049303196922245 0.8355905872246011 0.9706800391861629 0.7260442241861456 0.9424806092790848 0.9950407831050425 0.9603048431006457 0.9055125070101994 1.2992713427089837 1.0 18.774656391869026 -7.073537210171815 0.9663136246058772 1.1034074153245146 0.8743807424305515 0.37506436302108603 0.11016658142859309 0.6049377597470676 1.0306885087670008 0.09048489861400409 0.0409943375033313 8.442339051978979e-08 7.073537210171815 -0.22902667289396306 SINKLDS(ph)PDPFKLNDPFQPFPGNDSPK ddPTM_KYSE-520_SHP099_60min_R1 3 SINKLDSPDPFKLNDPFQPFPGNDSPK 27 2 P42566;B1AUU8;P42566-2 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 S(0.029)INKLDS(0.971)PDPFKLNDPFQPFPGNDSPK;S(0.215)INKLDS(0.785)PDPFKLNDPFQPFPGNDSPK;S(0.029)INKLDS(0.971)PDPFKLNDPFQPFPGNDSPK 145.95 9.274700000000001e-07 1595325000.0 1245313.0 1213214.0 1102926.0 853211.0 978507.0 1223775.0 959752.0 1072669.0 1909460.0 1164032.0 True False 1176233.0054200795 1154929.3783686603 1174022.3747039933 934299.9169127597 1055509.933956757 1216136.9662887119 1056773.0984368746 1068948.1616018268 1562750.197569475 1153719.582083193 1.0195137741323899 1.0010486051413663 1.017597683991929 0.8098154277885775 0.9148756338614749 1.0541010009493088 0.9159704965124466 0.9265233755257061 1.354532090672955 1.0 20.137861180916804 -7.733439208378491 24.999989449633905 1.1772663425102434 0.9563915046532936 0.417541593508449 0.10385214823599948 167.15657963004924 149246.57371852628 0.06739461409170892 0.02546137202948934 1.8473993718619488e-08 7.733439208378491 -0.22087483785694983 SIPAGAEPGEKGS(ph)AR ddPTM_KYSE-520_SHP099_60min_R1 1 SIPAGAEPGEKGSAR 15 1 A6NGP5;Q9H910;Q9H910-3;H3BU16;Q9H910-2 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 SIPAGAEPGEKGS(1)AR 115.56 0.00025415 337060000.0 245460.0 201560.0 184710.0 167550.0 182440.0 171110.0 171760.0 206320.0 227290.0 208870.0 True False 231843.84448762145 191876.7550522719 196616.70214644927 183473.9016242554 196796.9900583956 170042.03901996824 189123.1770160598 205604.3240754499 186019.86551463048 207019.57429840093 1.1199126714145324 0.9268532007301785 0.9497493307712207 0.8862635441409688 0.9506202045161665 0.8213814543684997 0.9135521491482491 0.9931636888552815 0.8985617236682113 1.0 17.65940765959192 -4.260174850647378 5.8843616696631065 0.922611465264831 1.1257418677136157 0.5752135828692966 0.049717315725774945 0.0957987681953236 15.22829825967594 0.012190041270674553 0.07785748630883664 5.493196685664773e-05 4.260174850647378 0.20313040244878477 SIPLECPLS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 SIPLECPLSSPK 12 0 Q92667-2;Q92667;I3L2A2;I3L2N7 Q92667-2 AKAP1 A-kinase anchor protein 1, mitochondrial 1 SIPLECPLS(0.575)S(0.425)PK 121.08 0.00012163 1098500000.0 220140.0 313280.0 238650.0 230840.0 250760.0 434340.0 364320.0 466050.0 632250.0 481110.0 True False 207928.39536178974 298229.55855713336 254033.76085350112 252778.9641954234 270493.3853707702 431629.1229497576 401149.0210205578 464433.38132688723 517449.337725483 476847.73969791626 0.43604777385232585 0.6254188365159542 0.5327355877044355 0.5301041467776679 0.5672531562006106 0.9051717917824152 0.8412518035100393 0.9739657812389054 1.0851458330352743 1.0 18.863169153143062 -6.435917176564003 1.2339801854532966 1.011646638715049 0.5231994253889499 0.902355322388989 0.0699029263702444 0.1332170485994055 0.4142680065558617 0.0379597177435801 0.02930416535140014 3.6650746389215267e-07 6.435917176564003 -0.488447213326099 SIPLECPLSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SIPLECPLSSPK 12 0 Q92667-2;Q92667;I3L2A2;I3L2N7 Q92667-2 AKAP1 A-kinase anchor protein 1, mitochondrial 1 SIPLECPLS(0.26)S(0.74)PK;SIPLECPLS(0.021)S(0.979)PK 135.26 4.4395e-05 735170000.0 1319900.0 1443340.0 1048040.0 1318110.0 1090520.0 1768900.0 1513820.0 2346150.0 2664000.0 2056570.0 True False 1246682.5158445835 1373999.779902492 1115598.3353232907 1443382.7780957785 1176337.719789966 1757859.6389598625 1666851.6990594561 2338011.7532455265 2180284.75397499 2038350.3897872465 0.6116134508035718 0.6740743822978853 0.5473044972605184 0.7081131807993188 0.5771028012081606 0.8623932606323585 0.8177454216953516 1.1470117036598193 1.0696319753948476 1.0 20.958970639551193 -6.777893870657541 1.3244244552853475 1.0815919568664116 0.6243547611434114 0.8513703387636014 0.07812303985623406 0.1460345626151551 0.5152041895966979 0.046439288896865126 0.026534111553165166 1.6676546906093082e-07 6.777893870657541 -0.45723719572300026 SIQEELQQLR ddPTM_KYSE-520_SHP099_60min_R1 1 SIQEELQQLR 10 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 133.23 0.0023475 266960000.0 103630.0 126010.0 87732.0 70912.0 100280.0 120350.0 87899.0 91129.0 97274.0 111650.0 False True 97881.43731871653 119956.29045513402 93387.34509616306 77651.45515952981 108171.4654848494 119598.85100843408 96784.68873157108 90812.89476866843 79611.49367798907 110660.86786238558 0.8845171668131037 1.0839991839238776 0.8439057717520946 0.7017065441425486 0.9775042214504234 1.0807691401549777 0.8746062686940925 0.8206414473596984 0.7194186636688179 1.0 16.75578561776946 -6.996160277257041 24.99557224308119 0.8315427806213934 0.9283207118343487 0.08143930691571566 0.12302944065632261 264.70965059553384 1723180.2944322682 0.05425406486060917 0.03638995193668382 1.0088804879789147e-07 6.996160277257041 0.0967779312129553 SIQEIQELDKDDES(ph)LRK ddPTM_KYSE-520_SHP099_60min_R1 4 SIQEIQELDKDDESLRK 17 2 J3KS60;J3KRE2;J3KTF8;J3QQX2;J3KRY1;P52565-2;P52565 J3KS60 ARHGDIA Rho GDP-dissociation inhibitor 1 1 SIQEIQELDKDDES(1)LRK;SIQEIQELDKDDES(1)LRK;SIQEIQELDKDDES(1)LRK;SIQEIQELDKDDES(1)LRK 238.03 1.9784000000000004e-23 2586660000.0 2926190.0 1841330.0 1471500.0 1397720.0 1412230.0 1345180.0 1034280.0 1135100.0 1285450.0 1205840.0 True False 2763868.407484857 1752869.7429073225 1566355.2444832434 1530558.8885601577 1523364.4665104577 1336784.232650815 1138835.1160000607 1131162.6030343326 1052044.6835574894 1195157.1957293244 2.312556387863484 1.4666436759707275 1.3105851264422181 1.280633956796085 1.2746143117858655 1.1185007607598139 0.9528747515970951 0.9464550831274207 0.8802563272151803 1.0 20.18876895370949 -1.0000000000000038 0.5220342723338717 0.9882255458187758 47.421770361814154 0.9291287865689654 0.10574910866707539 31.249623329140995 0.31248514541439654 0.061289214384949324 1607.6984470039338 0.09999999999999913 1.0000000000000038 46.433544815995376 up SIQEIQELDKDDESLR ddPTM_KYSE-520_SHP099_60min_R1 4 SIQEIQELDKDDESLR 16 1 J3KS60;J3KRE2;J3KTF8;J3QQX2;J3KRY1;P52565-2;P52565 J3KS60 ARHGDIA Rho GDP-dissociation inhibitor 1 0 ;;; 258.12 3.5565e-29 2594290000.0 1891420.0 1825120.0 1231470.0 1134100.0 1876070.0 1799150.0 1408570.0 1583340.0 1527610.0 1545630.0 False True 1786499.1621477085 1737438.495639029 1310852.526621668 1241884.5230204023 2023706.0356218694 1787920.8374891938 1550962.0019184414 1577847.7630943344 1250234.5319143133 1531936.9206819453 1.1661701849658694 1.134144932590047 0.855683095644786 0.8106629628506992 1.3210113342793592 1.1670982096921436 1.0124189716819587 1.0299691467661423 0.8161135847276065 1.0 20.546925463132137 -7.604154830652799 6.84631839018046 0.9090413416882125 1.0620065348689094 0.15081940838231644 0.14810416595647374 0.4606035460877973 31.710036214236357 0.10949842130355521 0.04051287414916454 2.487970172033541e-08 7.604154830652799 0.1529651931806969 SIQEIQELDKDDESLRK ddPTM_KYSE-520_SHP099_60min_R1 6 SIQEIQELDKDDESLRK 17 2 J3KS60;J3KRE2;J3KTF8;J3QQX2;J3KRY1;P52565-2;P52565 J3KS60 ARHGDIA Rho GDP-dissociation inhibitor 1 0 ;;;;; 257.02 1.4497e-29 8353370000.0 4293730.0 3728590.0 2566270.0 2384030.0 3799550.0 3509670.0 2738400.0 2917050.0 3118870.0 2859600.0 False True 4055548.23756145 3549462.9396723104 2731695.870377175 2610607.4944152418 4098552.968517745 3487764.847684012 3015224.1962085376 2906931.43439459 2552561.8283145553 2834266.168735135 1.4308988627456058 1.252339310551186 0.9638106330698876 0.9210876251542365 1.4460720075372564 1.2305706803960892 1.0638465185343406 1.025638123356595 0.900607662213215 1.0 21.434543818858415 -4.514197528777481 4.249079352074875 1.0837645736889203 1.4041102547126756 0.3540514121066819 0.15483676511903946 0.241788838686526 10.307991977162759 0.042925130652181606 0.159351157615443 3.060571087266127e-05 4.514197528777481 0.32034568102375527 SIQFVDWCPTGFK ddPTM_KYSE-520_SHP099_60min_R1 2 SIQFVDWCPTGFK 13 0 P68363;P68366-2;P68366;P68363-2 P68363 TUBA1B;TUBA4A Tubulin alpha-1B chain;Tubulin alpha-4A chain 0 ; 219.74 1.0822000000000001e-16 73367000.0 359950.0 454400.0 294414.0 263440.0 421990.0 437100.0 295740.0 311700.0 326070.0 346470.0 False True 339982.85595746484 432569.94193169515 313392.3975190552 288477.25839387614 455198.2122053411 434371.8967659876 325636.28534425655 310618.785451327 266863.9075557899 343400.54534958105 0.9900475132075373 1.259665856067118 0.9126147344932791 0.8400605715410465 1.3255605396373213 1.264913240961216 0.9482695637910519 0.9045378339021497 0.7771213854192427 1.0 18.3895328049024 -6.982686360852471 23.4203584576773 0.889778447688399 1.0970697605742634 0.2699516143725792 0.15601485358145778 159.4391461936075 215673.80387844355 0.0693336430223492 0.046728197296095335 1.0406714474810087e-07 6.982686360852471 0.20729131288586444 SIRDT(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 4 SIRDTPAK 8 1 P06748;P06748-3 P06748 NPM1 Nucleophosmin 1 SIRDT(1)PAK;S(0.261)IRDT(0.739)PAK;SIRDT(1)PAK;S(0.001)IRDT(0.999)PAK 108.2 0.0042651 202790000000.0 87965200.0 90551300.0 80108200.0 66582800.0 64243500.0 66645800.0 68075800.0 70114400.0 83370500.0 76293500.0 True False 83085595.00172126 86201079.6277277 85272102.74965176 72910809.2931513 69299097.95448668 66229838.84119566 74957566.21978277 69871189.51122397 68232518.79927625 75617598.94544475 1.0987600262428907 1.1399605492620646 1.1276753551930732 0.9642042369760208 0.9164413961951288 0.8758521794506857 0.9912714403145997 0.9240069836339739 0.9023364897965545 1.0 26.172218704960983 -5.316479852163631 3.9330280968809164 0.9318900054675403 1.1255196653461135 0.8385280461552779 0.03690657581335961 0.079444021260328 2.534939446940532 0.010457493424950327 0.016575769058999917 4.825253649091521e-06 5.316479852163631 0.19362965987857317 SIRDTPAK ddPTM_KYSE-520_SHP099_60min_R1 3 SIRDTPAK 8 1 P06748;P06748-3 P06748 NPM1 Nucleophosmin 0 ;; 83.99799999999999 0.0070355 1380490000.0 1272160.0 1286440.0 1111090.0 992430.0 1163320.0 1244360.0 1128630.0 1145860.0 1346860.0 1416770.0 False True 1201590.7488119125 1224637.4914141924 1182712.6392068572 1086750.2488150394 1254866.665614627 1236593.4876680954 1242722.9347673233 1141885.2791057334 1102304.1755776105 1404218.5200303819 0.8557006845244532 0.8721131888986167 0.8422568299279145 0.7739181853202779 0.893640589206498 0.880627530565072 0.8849925542503425 0.8131820388475061 0.7849947567660345 1.0 20.42133603006151 SIRPGLSPYR ddPTM_KYSE-520_SHP099_60min_R1 2 SIRPGLSPYR 10 1 Q14697;Q14697-2 Q14697 GANAB Neutral alpha-glucosidase AB 0 ; 178.53 0.00034379 1221800000.0 1073180.0 1029040.0 700330.0 710160.0 1041260.0 994890.0 874080.0 880230.0 863680.0 821850.0 False True 1013648.5660687087 979603.3737794702 745474.3923676187 777653.3928826101 1123201.2380410272 988680.5224742929 962440.5365987291 877176.6875772272 706857.4836010208 814569.0483896241 1.244398578699569 1.202603236295454 0.9151764283720291 0.9546807534855455 1.3788901508859914 1.213746734459014 1.181533399165414 1.076859830742865 0.8677686501819023 1.0 19.635677470974123 -7.58051454511547 4.814049769404994 0.937322743221722 1.1503986881109658 0.3096360935067267 0.13094260189272644 0.2785913323267381 13.214941532511435 0.10237168039250132 0.03673374003752829 2.62715353803461e-08 7.58051454511547 0.21307594488924375 SIS(ph)ADDDLQESSR ddPTM_KYSE-520_SHP099_60min_R1 1 SISADDDLQESSR 13 0 P18615;P18615-3;A2ABK4;A0A0A0MT02;P18615-4;A0A0G2JI50;E9PD43;A0A0A0MSN9 P18615 NELFE Negative elongation factor E 1 S(0.001)IS(0.999)ADDDLQESSR 178.03 7.1883e-08 762300000.0 837360.0 783330.0 848340.0 810650.0 893630.0 1055200.0 1013200.0 1240600.0 1335300.0 1048500.0 True False 790909.9715642246 745697.6509976987 903025.353791991 887693.9322691896 963953.5969408256 1048614.105393435 1115624.1438790858 1236296.648158218 1092843.1801737247 1039211.1057206572 0.7610676668199727 0.7175612797946217 0.868952755432472 0.8541998130914935 0.9275820780151853 1.0090482093782642 1.0735298513822549 1.1896491880741487 1.051608450061622 1.0 19.987057322930944 -5.870293085030024 0.8640563826794037 1.10012125185069 0.7477413359278466 0.8428904267498354 0.055315399111348036 0.21744680087122556 0.3557991990504905 0.029928873914182294 0.04321940061043556 1.348052837753058e-06 5.870293085030024 -0.35237991592284335 SIS(ph)ASDLTFK ddPTM_KYSE-520_SHP099_60min_R1 5 SISASDLTFK 10 0 J3KP97;Q5T9S5 J3KP97 CCDC18 Coiled-coil domain-containing protein 18 1 S(0.012)IS(0.987)AS(0.001)DLTFK;S(0.174)IS(0.819)AS(0.007)DLTFK;S(0.001)IS(0.993)AS(0.006)DLTFK;S(0.003)IS(0.991)AS(0.006)DLTFK;S(0.001)IS(0.992)AS(0.008)DLTFK 187.35 9.3253e-06 751815000.0 3190420.0 3050560.0 2840110.0 2520220.0 2720530.0 2983200.0 2669910.0 2800090.0 3446640.0 2905600.0 True False 3013441.0426554075 2904006.5186160854 3023188.03493667 2759740.9510682267 2934620.2333017234 2964580.7422381463 2939810.558610555 2790377.141335922 2820817.0587238558 2879858.6445225966 1.0463850537896644 1.0083850900596865 1.049769592228661 0.9582904203708643 1.0190153738563807 1.029418838968603 1.020817658603482 0.96892850857216 0.9794984431228817 1.0 21.457566569237905 -7.2530855330579564 24.71121218663737 0.9806601066131492 1.017735593610614 0.3064322821098865 0.024756364845976844 616.0557273563679 1822339.3340095244 0.011809193404757473 0.006661872619399515 5.583602164571612e-08 7.2530855330579564 0.03707548699746488 SIS(ph)EIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE ddPTM_KYSE-520_SHP099_60min_R1 3 SISEIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE 35 1 P49902-2;P49902 P49902-2 NT5C2 Cytosolic purine 5-nucleotidase 1 S(0.252)IS(0.748)EIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE;S(0.158)IS(0.842)EIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE;S(0.144)IS(0.856)EIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE 210.06 1.7193e-22 1153000000.0 171773.0 178676.0 201425.0 201791.0 195891.0 189289.0 178282.0 245946.0 265070.0 195480.0 True False 162244.40926901373 170092.1367618563 214409.1777913952 220969.15596932336 211306.50723267448 188107.57713781076 196304.48442464607 245092.87073022817 216939.9698709272 193748.1992811386 0.8373982822601037 0.877903058675884 1.1066382995398911 1.1404965661058133 1.090624367176997 0.9708868409396517 1.0131938523970392 1.2650072188520618 1.1197005736096475 1.0 17.5638233763063 -4.72797893878435 5.557347835700241 1.0931560123003141 0.8512547872398784 0.5740421851286368 0.0795204766755882 0.1291161942255914 10.348432105375629 0.0219318346682757 0.05753324140592055 1.8707728617471583e-05 4.72797893878435 -0.24190122506043577 SIS(ph)GTSTSEKPNSMDTANTSPFK ddPTM_KYSE-520_SHP099_60min_R1 1 SISGTSTSEKPNSMDTANTSPFK 23 1 Q9UJF2-2;Q9UJF2 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 S(0.161)IS(0.637)GT(0.153)S(0.037)T(0.01)S(0.003)EKPNSMDTANTSPFK 81.89 0.0028937 1461400000.0 1149800.0 1001300.0 838960.0 924610.0 843640.0 904230.0 972800.0 1070100.0 1049800.0 1034600.0 True False 1086018.301930525 953196.0450180585 893040.7039834609 1012484.656405868 910029.6683450168 898586.3651629131 1071140.1176130816 1066388.0728632184 859182.7833044089 1025434.2489066188 1.059081362933318 0.9295535486886798 0.8708902642326175 0.987371601334207 0.8874578446305519 0.8762983741971182 1.044572208072041 1.0399380301567527 0.837872134874101 1.0 19.96780355815074 -6.758209345338137 24.999994803994767 0.9839237556004445 0.9321469288439334 0.07941007127666311 0.07512839903610657 214.2442758645516 1658238.2750615354 0.029584167309154686 0.02194339895206348 1.7449808075403217e-07 6.758209345338137 -0.051776826756511185 SIS(ph)LGDSEGPIVATLAQPLR ddPTM_KYSE-520_SHP099_60min_R1 11 SISLGDSEGPIVATLAQPLR 20 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 SIS(1)LGDSEGPIVATLAQPLR;SIS(1)LGDSEGPIVATLAQPLR;S(0.01)IS(0.99)LGDSEGPIVATLAQPLR;SIS(1)LGDSEGPIVATLAQPLR;SIS(1)LGDSEGPIVATLAQPLR;S(0.01)IS(0.99)LGDSEGPIVATLAQPLR;S(0.025)IS(0.975)LGDSEGPIVATLAQPLR;S(0.123)IS(0.876)LGDS(0.001)EGPIVATLAQPLR;S(0.024)IS(0.975)LGDS(0.001)EGPIVATLAQPLR;S(0.002)IS(0.998)LGDSEGPIVATLAQPLR;S(0.004)IS(0.996)LGDSEGPIVATLAQPLR 305.98 2.3061999999999993e-53 5972247000.0 655110.0 834587.0 672431.0 541679.0 580695.0 782467.0 585934.0 719656.0 923207.0 750143.0 True False 618769.7423705927 794492.1877793736 715776.9781876401 593160.0092982708 626392.3927974127 777583.3332116037 645165.9268847696 717159.6813049727 755575.8809545757 743497.3166224231 0.832242065353449 1.0685878348406301 0.9627162898708073 0.7977971083915836 0.842494490286801 1.0458455139341019 0.8677447953889657 0.9645760183276819 1.0162456058174136 1.0 19.503968009851683 -7.525876996941628 5.682116110335714 1.0039628369638385 0.9214053538048199 0.15861347284941896 0.0844850007599064 0.329628938696787 39.41862280841102 0.05658035914017879 0.022565860454940394 2.979360139244749e-08 7.525876996941628 -0.08255748315901856 SIS(ph)NPPGSNLR ddPTM_KYSE-520_SHP099_60min_R1 1 SISNPPGSNLR 11 0 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;Q9H4A3-4 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 1 S(0.001)IS(0.999)NPPGSNLR 123.36 0.00036105 0.0 215570.0 195730.0 161260.0 169510.0 134370.0 189580.0 163360.0 172890.0 195710.0 171350.0 True False 203611.90237185886 186326.8370032805 171655.0776251229 185620.17943496004 144944.15453928197 188396.76089886978 179874.02303996027 172290.28494282922 160173.99744761438 169831.9723082826 1.1989020654029632 1.097124613644927 1.0107347591390565 1.0929636917718788 0.8534562283489017 1.1093126832260298 1.0591293299794524 1.01447496958985 0.9431321751175518 1.0 17.37374855846616 -4.265590767913394 1.3653605588610007 1.0102820821385754 1.28177696088181 0.42266989681176004 0.06952903153152683 1.2755593857153715 2.1276423829991815 0.020080147631947556 0.47902515315529787 5.425118540438237e-05 4.265590767913394 0.2714948787432345 SIS(ph)PEWK ddPTM_KYSE-520_SHP099_60min_R1 7 SISPEWK 7 0 F5H6E2;O00159-2;O00159-3;O00159 F5H6E2 MYO1C Unconventional myosin-Ic 1 S(0.018)IS(0.982)PEWK;S(0.001)IS(0.999)PEWK;SIS(1)PEWK;SIS(1)PEWK;S(0.011)IS(0.989)PEWK;S(0.007)IS(0.993)PEWK;S(0.011)IS(0.989)PEWK 173.39 0.00050348 4165020000.0 8070090.0 7330240.0 6669340.0 6574840.0 7534780.0 6696050.0 6566930.0 7117070.0 8330180.0 6709880.0 True False 7622426.02037443 6978084.267485442 7099256.327721297 7199710.816802281 8127724.318966218 6654257.4681763705 7230779.371460608 7092382.545306633 6817629.298749006 6650435.68340765 1.1461543849513236 1.0492672359639912 1.0674874046873983 1.0825923532746933 1.2221341135956392 1.000574666826454 1.0872640103115159 1.066453820913058 1.0251402499476074 1.0 22.665017426885687 -7.630267251864809 0.8269794470047539 0.9999953347283347 1.098457640106648 0.27218651702623686 0.05486586184702101 0.8421740521015026 1.1868161638379326 0.05197875627665497 0.020361075064254303 2.342786690624561e-08 7.630267251864809 0.09846230537831324 SIS(ph)PSALQDLLR ddPTM_KYSE-520_SHP099_60min_R1 7 SISPSALQDLLR 12 0 Q92793-2;Q92793 Q92793-2 CREBBP CREB-binding protein 1 S(0.001)IS(0.999)PSALQDLLR;S(0.001)IS(0.999)PSALQDLLR;SIS(1)PSALQDLLR;S(0.003)IS(0.997)PSALQDLLR;S(0.007)IS(0.993)PSALQDLLR;S(0.001)IS(0.999)PSALQDLLR;S(0.002)IS(0.997)PSALQDLLR 223.58 5.2201e-11 957159000.0 1007961.0 1122241.0 817672.0 640217.0 736971.0 1023104.0 743795.0 888422.0 1061558.0 923905.0 True False 952047.3940095633 1068326.8578419173 870380.4454414576 701063.0311917404 794966.4249086041 1016718.4284348408 818985.057339661 885340.2714412542 868805.826899468 915719.9204872139 1.0396709438220162 1.1666524162469984 0.9504876174129386 0.7655867427441525 0.8681327195390025 1.1102941037843645 0.8943619539301007 0.9668243003496134 0.9487680757640556 1.0 19.804546881589157 -4.832595875652832 7.304398367344585 0.9320318637742404 1.1024033268569262 0.353895723625528 0.08908169465938084 0.22177289257322957 18.927582654803384 0.024294693839705513 0.051391683722526116 1.4702937947972536e-05 4.832595875652832 0.1703714630826858 SIS(ph)QDSLDELSMEDYWIELENIKK ddPTM_KYSE-520_SHP099_60min_R1 1 SISQDSLDELSMEDYWIELENIKK 24 1 Q8N392-2;Q8N392 Q8N392-2 ARHGAP18 Rho GTPase-activating protein 18 1 S(0.105)IS(0.884)QDS(0.011)LDELSMEDYWIELENIKK 170.36 1.3047e-10 23792000.0 25958.0 30412.0 23415.0 19523.0 22506.0 22551.0 22094.0 24284.0 36987.0 25552.0 True False 24518.057994009887 28950.961870657342 24924.368365324637 21378.46005019601 24277.094158376727 22410.250844131282 24327.477136660622 24199.764471928207 30271.093166393744 25325.62915915519 0.9681124934717222 1.1431487718910864 0.984155939767226 0.8441432951515725 0.9585978696051696 0.8848842689473718 0.9605872763822835 0.9555444534012699 1.1952750700154187 1.0 14.628310489583496 -7.7331868394007985 24.991839401087343 1.0976375726453647 0.9624346396834574 0.28813303981068483 0.0850296144784607 240.65187154647546 212878.50501413262 0.05994749063826703 0.022648238999440504 1.8484732095431427e-08 7.7331868394007985 -0.13520293296190722 SIS(ph)REPS(ph)PALGPNLDGSGLLPR ddPTM_KYSE-520_SHP099_60min_R1 3 SISREPSPALGPNLDGSGLLPR 22 1 Q9BRZ2 Q9BRZ2 TRIM56 E3 ubiquitin-protein ligase TRIM56 2 S(0.149)IS(0.851)REPS(1)PALGPNLDGSGLLPR;S(0.04)IS(0.96)REPS(1)PALGPNLDGSGLLPR;S(0.444)IS(0.556)REPS(1)PALGPNLDGSGLLPR 132.9 7.395599999999999e-06 3758300000.0 988960.0 903180.0 869240.0 864600.0 968890.0 836040.0 767250.0 747980.0 1041350.0 800960.0 True False 934100.4173571168 859789.8770991802 925272.601233174 946771.3240485309 1045136.1307700003 830821.9642467088 844811.1176384015 745385.4319598452 852267.0902972429 793864.1175374512 1.1766502562865235 1.0830441357725415 1.165530196909956 1.192611308576831 1.3165176604933213 1.046554373592171 1.064175970390231 0.9389332701823258 1.0735679714822688 1.0 19.59853256274796 -6.460313978440113 11.152027770288912 1.0199433695174054 1.180459436591169 0.6222420862762991 0.06338729069751821 0.635483986467064 112.14295999157815 0.02331769241915432 0.02054349390778048 3.4648626345276116e-07 6.460313978440113 0.16051606707376354 SIS(ph)TSGPLDK ddPTM_KYSE-520_SHP099_60min_R1 1 SISTSGPLDK 10 0 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.073)IS(0.897)T(0.03)S(0.001)GPLDK 65.179 0.055302 0.0 243800.0 225920.0 215750.0 167120.0 169970.0 238910.0 185790.0 249980.0 271560.0 234340.0 True False 230275.92799674903 215066.46408716647 229657.5902122054 183003.0345535397 183345.67200299006 237418.8740708352 204571.4663356645 249112.87772577076 222251.54947051365 232263.9299137612 0.9914407634549612 0.9259572253299077 0.98877854300268 0.7879098343917977 0.7893850417112364 1.0221943379627996 0.880771570564664 1.0725422488901548 0.9568922283930823 1.0 17.825405598557545 -7.249906742695554 24.635577561098664 1.0110379320851504 0.9105206496324373 0.24078426045107848 0.07925294891354857 872.3545056077762 1863496.0800605782 0.039192501918764666 0.02236170866843725 5.624620913278708e-08 7.249906742695554 -0.10051728245271307 SIS(ph)VGENLGLVAEPQAHAPIR ddPTM_KYSE-520_SHP099_60min_R1 1 SISVGENLGLVAEPQAHAPIR 21 0 O60336-4;O60336-3;O60336-6;O60336 O60336-4 MAPKBP1 Mitogen-activated protein kinase-binding protein 1 1 S(0.077)IS(0.923)VGENLGLVAEPQAHAPIR 161.88 3.5486999999999995e-09 803110000.0 117420.0 83590.0 104060.0 89556.0 87378.0 123100.0 115830.0 122520.0 111220.0 134450.0 True False 110906.47852903309 79574.210928852 110767.87410188682 98067.37531400687 94254.15148718747 122331.68723837358 127539.22679186205 122095.00671638292 91025.25162803986 133258.87760051704 0.8322633397942021 0.5971400357085347 0.8312232257722171 0.7359162637403632 0.7073011058200731 0.9180002821658085 0.9570786508813218 0.9162241864470664 0.6830708262523043 1.0 17.02387212181986 -6.262725388726891 24.996597937891547 0.8935265463011567 0.7375450771723728 0.3742704018943209 0.09957876245136972 127.76517482906095 2483390.78905943 0.03336749017580213 0.031028228053493225 5.46103061549172e-07 6.262725388726891 -0.15598146912878386 SISASKAS(ph)PPGDLQNPK ddPTM_KYSE-520_SHP099_60min_R1 8 SISASKASPPGDLQNPK 17 1 O00273 O00273 DFFA DNA fragmentation factor subunit alpha 1 SISASKAS(1)PPGDLQNPK;SIS(0.001)AS(0.021)KAS(0.978)PPGDLQNPK;SIS(0.001)AS(0.007)KAS(0.992)PPGDLQNPK;SISAS(0.014)KAS(0.986)PPGDLQNPK;SISAS(0.001)KAS(0.999)PPGDLQNPK;SISAS(0.005)KAS(0.995)PPGDLQNPK;SIS(0.011)AS(0.017)KAS(0.973)PPGDLQNPK;SISASKAS(1)PPGDLQNPK 277.44 5.5335999999999996e-30 12554230000.0 14266910.0 16174810.0 12923940.0 9495580.0 10064280.0 13131530.0 9984660.0 12221020.0 17855360.0 13060800.0 True False 13475496.061920006 15397747.848715205 13757037.851435127 10398037.068249779 10856281.578079965 13049571.250376275 10994006.873691034 12178628.134027522 14613276.720996581 12945091.47314863 1.0409734137353581 1.1894661293552078 1.0627223361048224 0.803241683522895 0.8386407775177657 1.0080709956700085 0.849279968125012 0.9407911994510858 1.128866238705859 1.0 23.625901823917822 -5.018030161992938 20.916544565992382 0.9311314011436804 1.1179385331547516 0.3717924301649479 0.09617938545134762 82.43238414504373 95631.93100285574 0.026209887781621026 0.04688080097647793 9.593340029230295e-06 5.018030161992938 0.18680713201107113 SISEIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE ddPTM_KYSE-520_SHP099_60min_R1 1 SISEIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE 35 1 P49902-2;P49902 P49902-2 NT5C2 Cytosolic purine 5-nucleotidase 0 167.56 3.3888e-10 427780000.0 246980.0 300560.0 375500.0 168040.0 238930.0 295660.0 203590.0 226830.0 357830.0 271520.0 False True 233279.52705757634 286120.6464502426 399705.33082124224 184010.47107693172 257732.43167426248 293814.67627049173 224170.8640469241 226043.1796725199 292857.0921602362 269114.5440393633 0.8668410244800988 1.0631928031670852 1.4852609778042227 0.6837626399337844 0.9577053243044495 1.0917829704050317 0.8329942361425651 0.8399515547530447 1.0882246933387596 1.0 18.037860836602288 -5.282865808660221 24.99950002909603 0.9252374590155618 1.1309078585193195 0.2172848575772114 0.18300855115611028 1241.5407916399768 1448577.226991973 0.05187136137751609 0.07701727552794693 5.213557783666809e-06 5.282865808660221 0.20567039950375776 SISS(ph)PSVSSETMDKPVDLSTR ddPTM_KYSE-520_SHP099_60min_R1 2 SISSPSVSSETMDKPVDLSTR 21 1 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 S(0.028)IS(0.107)S(0.794)PS(0.07)VS(0.001)SETMDKPVDLSTR;SIS(0.051)S(0.832)PS(0.051)VS(0.051)S(0.015)ETMDKPVDLSTR 154.86 2.3462e-07 4242600000.0 2093350.0 2185970.0 1752200.0 1480040.0 1767660.0 2049540.0 2207870.0 2239650.0 2656910.0 2260630.0 True False 1977227.702510233 2080952.719992134 1865149.615619124 1620702.556609748 1906764.785390396 2036748.0606217382 2431063.0463347035 2231881.176888241 2174482.1192506324 2240602.5769435284 0.8824535519402228 0.9287469100525728 0.8324321478570417 0.7233333449167928 0.8510053523152997 0.9090179943469162 1.0850041285103706 0.9961075649269383 0.9704898769762673 1.0 21.095455345294702 -6.5472593742914 4.529850259237389 1.0124863228738328 0.843516262378582 0.6710548160588966 0.05579405853203194 0.13243858311525847 6.632663276059683 0.023917024945957592 0.018876458465353553 2.8362246401739984e-07 6.5472593742914 -0.16897006049525076 SISSS(ph)NPDLAVAPGSVDDEVSR ddPTM_KYSE-520_SHP099_60min_R1 2 SISSSNPDLAVAPGSVDDEVSR 22 0 Q96HP0;K7EKT0;K7EP20;K7ESB7 Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 SIS(0.001)S(0.082)S(0.918)NPDLAVAPGSVDDEVSR;S(0.004)IS(0.022)S(0.154)S(0.82)NPDLAVAPGSVDDEVSR 193.59 1.0047999999999999e-13 159390000.0 515076.0 588120.0 633680.0 451403.0 421054.0 501431.0 404520.0 416817.0 518071.0 558380.0 True False 486503.7075014497 559865.8324138822 674528.0267238488 494304.20540073933 454188.5543304525 498301.3831326146 445412.82933474914 415371.1591128188 424002.36590712366 553433.1876130665 0.8790649321189414 1.0116231641773408 1.218806609038137 0.8931596739484526 0.8206745899886275 0.90038218575537 0.804817707546227 0.7505353282196477 0.7661310803131044 1.0 19.078049634772768 -5.506724208529735 22.980827723497566 0.8316905028204854 1.0376728558514443 0.42542255013088026 0.10169504820867531 223.17231619851222 317475.88509471837 0.029245755612575867 0.0419394648255307 3.1136930082476063e-06 5.506724208529735 0.2059823530309589 SISVIDSPGILS(ph)GEK ddPTM_KYSE-520_SHP099_60min_R1 1 SISVIDSPGILSGEK 15 0 Q9H223 Q9H223 EHD4 EH domain-containing protein 4 1 SISVIDS(0.001)PGILS(0.999)GEK 87.13799999999999 0.0040062 0.0 79563.0 70296.0 74097.0 86027.0 74813.0 76373.0 71211.0 95072.0 77849.0 94536.0 True False 75149.48178509166 66918.87464355282 78873.41117939175 94202.9802150394 80700.35747225795 75896.32777787412 78409.70283238607 94742.21742197152 63713.5840135882 93698.48458789501 0.8020351888892799 0.7141937773900574 0.8417789415303039 1.0053842453201165 0.861277082838581 0.810005926047594 0.8368299997299624 1.0111392712343967 0.6799852131420642 1.0 16.515738094507462 -11.01802974728469 0.01984172435730201 1.9152481309890872 3.357955098948012e-06 0.14437186469118768 0.10293510767472241 3699.507274338666 10.137487066337888 574.5027178018684 414.04812319635244 9.593349189924945e-12 11.01802974728469 -1.9152447730339883 SITNNSSDPFLNGGPYHS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SITNNSSDPFLNGGPYHSR 19 0 Q9GZV5;C9J337 Q9GZV5 WWTR1 WW domain-containing transcription regulator protein 1 1 SITNNSSDPFLNGGPYHS(1)R 151.91 7.349299999999999e-07 307830000.0 158740.0 167100.0 140530.0 155850.0 130250.0 127880.0 120200.0 128830.0 150020.0 122340.0 True False 149934.37575965517 159072.26517778632 149588.78865594996 170661.93714198895 140499.9339788755 127081.85348532253 132350.98903895216 128383.11879914816 122780.1496964443 121256.16277907965 1.2365093230999338 1.311869529201621 1.2336592650428035 1.4074495945655414 1.1587034486227035 1.0480444917002436 1.0914990711035983 1.0587760313102876 1.0125683254560947 1.0 16.887698547797378 -5.999204275215224 4.472218292045629 1.0522845216745786 1.2943698064701714 0.8434353472623635 0.051623764031350064 0.07503639000524 3.8121386363151126 0.016455125235699385 0.017798425043122894 1.0018339035756082e-06 5.999204275215224 0.24208528479559277 SITS(ph)PTTLYDR ddPTM_KYSE-520_SHP099_60min_R1 3 SITSPTTLYDR 11 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 SIT(0.001)S(0.814)PT(0.093)T(0.093)LYDR;S(0.002)IT(0.213)S(0.777)PT(0.006)T(0.002)LYDR;SIT(0.042)S(0.856)PT(0.079)T(0.023)LYDR 150.09 5.6643999999999995e-05 2672320000.0 2577750.0 2492940.0 1956550.0 1953870.0 2065900.0 2284300.0 1976940.0 2215060.0 2869800.0 2117350.0 True False 2434757.068882771 2373175.4204207743 2082672.3435906868 2139565.2173475665 2228474.5766369174 2270042.8363819397 2176788.388275092 2207376.4738588915 2348716.661770803 2098591.9262733706 1.160186045891425 1.13084177572102 0.9924141599501178 1.0195241821724508 1.0618903793240972 1.0816980700068868 1.0372613946631257 1.0518369227592987 1.1191869330887962 1.0 21.000990229438163 -4.6125400808429005 6.546820595556659 1.048185609751722 1.152979775713766 0.5596182484674252 0.03581194158131401 0.14086801497430554 8.265280264727425 0.009303179849149345 0.025191959488850005 2.4403938347966053e-05 4.6125400808429005 0.10479416596204416 SITSTPLS(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 2 SITSTPLSGK 10 0 Q9P0K7-3;Q9P0K7;Q9P0K7-2;Q9P0K7-4 Q9P0K7-3 RAI14 Ankycorbin 1 SITST(0.056)PLS(0.944)GK;SITS(0.001)T(0.028)PLS(0.971)GK 146.16 0.00019158 1815560000.0 2180200.0 2640800.0 2667600.0 2685200.0 2933700.0 2793800.0 2518600.0 2757700.0 3529000.0 2642700.0 True False 2059259.959879052 2513932.0040783854 2839557.764310908 2940400.6006651823 3164565.4995303373 2776362.857892507 2773204.6671672575 2748134.1823520176 2888222.5588504993 2619287.733989488 0.7861908156010616 0.9597769544201114 1.0840953925996983 1.122595491327179 1.2081778792245654 1.0599686402775519 1.058762896179923 1.049191406767015 1.1026747926053133 1.0 21.320743120650114 -4.417263964063218 2.0935864085694758 1.0921926974765972 0.7518586503489118 0.7607660563270877 0.05226208527925417 0.237481533371122 1.481380949986141 0.014826723700186726 0.13496729510810532 3.825921332434837e-05 4.417263964063218 -0.34033404712768545 SIVNYKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SIVNYKPK 8 1 P12814-3;P12814;P12814-2;P12814-4;H9KV75;H7C5W8;H0YJ11;H0YJW3 P12814-3 ACTN1 Alpha-actinin-1 0 ; 120.07 0.0010417999999999998 743150000.0 2136150.0 1917030.0 1547460.0 1328260.0 2113330.0 1831740.0 1500540.0 1836370.0 1712280.0 1597660.0 False True 2017653.5011905502 1824933.001279306 1647211.747623543 1454497.4310440684 2279637.047797133 1820307.4312105477 1652229.2270591424 1830000.0610819797 1401373.1150661772 1583505.9753606713 1.274168542831671 1.152463602711474 1.040230837934389 0.9185298026505906 1.4396137957596944 1.1495425085440178 1.0433994268211197 1.1556635021002462 0.8849812611202745 1.0 20.59469088071108 -7.753652522979168 24.991198275449626 0.9424906157315295 1.1421538880603008 0.2666851351217837 0.1352837096923729 218.23414345896686 700418.4951196185 0.09733519627295653 0.03527110698115189 1.76338635947321e-08 7.753652522979168 0.19966327232877135 SIVSLMPEDQIS(ph)PVSEVLKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SIVSLMPEDQISPVSEVLKPK 21 1 Q5THK1-3;Q5THK1-2;Q5THK1-4;Q5THK1 Q5THK1-3 PRR14L Protein PRR14L 1 SIVSLMPEDQIS(0.995)PVS(0.005)EVLKPK;SIVSLMPEDQIS(1)PVSEVLKPK 232.06 8.359400000000001e-24 0.0 268990.0 291360.0 208935.0 197970.0 221972.0 276941.0 197743.0 281180.0 313790.0 294270.0 True False 254068.58848172915 277362.62825972366 222403.28440781988 216785.0092781492 239439.93355208394 275212.50849295186 217732.7922257029 280204.6522079053 256813.6460021818 291662.99673859536 0.8711032641190325 0.950969548284219 0.7625351412237943 0.743272241258784 0.8209472446951622 0.9435976163257098 0.7465218236814839 0.9607137529998032 0.8805150083277534 1.0 18.153942837676603 -7.289529219920159 24.735813511313708 0.9404608100544761 0.8360831596574521 0.32302760481156034 0.07470392173760251 900.4265205470665 792906.9200884547 0.042048284673816105 0.020205395997494532 5.13417632908097e-08 7.289529219920159 -0.10437765039702407 SIYDDIS(ph)SPGLGSTPLTSR ddPTM_KYSE-520_SHP099_60min_R1 2 SIYDDISSPGLGSTPLTSR 19 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 SIYDDIS(0.616)S(0.384)PGLGSTPLTSR;SIYDDIS(0.555)S(0.445)PGLGSTPLTSR 117.26 3.6403000000000004e-05 667120000.0 253540.0 282740.0 231529.0 169262.0 196344.0 252520.0 190919.0 234860.0 259140.0 256490.0 True False 239475.63078054035 269156.74599860795 246453.7297994981 185348.6095895239 211795.15575545706 250943.9290124621 210218.95570988077 234045.32547673635 212086.70838779229 254217.6981462007 0.9420100666744996 1.0587647829452684 0.9694593712266345 0.7290940439675047 0.833125141561362 0.9871221824538122 0.8269249436323027 0.9206492198750725 0.8342720036188084 1.0 17.95570494592428 -5.01851107637395 24.57066879598876 0.8715360516138974 1.0038186157082285 0.3024853966180019 0.08016140267246091 632.1918301881934 839142.3729172341 0.021145901911594902 0.03754535386553718 9.582722759372907e-06 5.01851107637395 0.13228256409433115 SIYDDISS(ph)PGLGS(ph)TPLTSR ddPTM_KYSE-520_SHP099_60min_R1 1 SIYDDISSPGLGSTPLTSR 19 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5-2 NUP35 Nucleoporin NUP53 2 SIYDDIS(0.13)S(0.869)PGLGS(0.536)T(0.448)PLT(0.009)S(0.008)R 79.013 0.0066767 159460000.0 322150.0 276860.0 280580.0 264340.0 291280.0 264780.0 242250.0 266680.0 371480.0 283030.0 True False 304279.6973098962 263559.2300246676 298666.6357438726 289462.7941232812 314202.0788435069 263127.40980484564 266738.994132164 265754.94932358 304028.5962487346 280522.5743940078 1.0846888096874525 0.9395294856181009 1.0646795053448375 1.0318698762428882 1.1200598722660893 0.9379901434786856 0.950864630799787 0.9473567319766362 1.083793690776955 1.0 18.097757347430722 -6.284825374775455 24.991350100335115 0.9786398134753355 1.042142322565524 0.2270113614121937 0.05825828683792738 1251.292001043188 1337183.5466619665 0.020457268477329846 0.018050662780321674 5.190086848898723e-07 6.284825374775455 0.06350250909018851 SIYDDISS(ph)PGLGST(ph)PLTSR ddPTM_KYSE-520_SHP099_60min_R1 1 SIYDDISSPGLGSTPLTSR 19 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5-2 NUP35 Nucleoporin NUP53 2 SIYDDIS(0.152)S(0.848)PGLGS(0.26)T(0.738)PLT(0.001)S(0.001)R 157.42 3.324e-08 198690000.0 280040.0 252280.0 247400.0 225930.0 213060.0 200500.0 205550.0 231290.0 311710.0 230330.0 True False 264505.62295410014 240160.09011999954 263347.79985399573 247402.31927166868 229826.6098544276 199248.60512830122 226328.99997468066 230487.7089734921 255111.3215696488 228289.45539402842 1.1586414383334633 1.0519981735708395 1.153569705615428 1.0837220617336503 1.0067333572536061 0.8727893488746443 0.9914124136133926 1.0096292383529912 1.1174906047645772 1.0 17.800504697985097 -5.706301851438906 3.763978342983857 0.9926349711166521 1.1145399633542303 0.4496027015098454 0.06152390363157104 0.21825281102301056 6.287037755075904 0.019844460460962846 0.02535715742977872 1.9665190079406565e-06 5.706301851438906 0.12190499223757822 SIYDDISS(ph)PGLGSTPLTSR ddPTM_KYSE-520_SHP099_60min_R1 2 SIYDDISSPGLGSTPLTSR 19 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 SIYDDIS(0.354)S(0.626)PGLGS(0.014)T(0.005)PLTSR;SIYDDIS(0.005)S(0.995)PGLGSTPLTSR 171.71 6.7789e-09 1066490000.0 1036480.0 1283800.0 1031690.0 850530.0 915660.0 1251580.0 952920.0 1101620.0 1360830.0 1233560.0 True False 978984.3882283443 1222124.320976915 1098194.3881623654 931364.115478832 987717.2326072705 1243768.424969973 1049250.4532029799 1097798.7373400405 1113737.575732651 1222631.6180951593 0.8007190176821914 0.9995850777039166 0.8982218126121545 0.7617700227071524 0.8078616796661273 1.0172879602997218 0.8581901839228528 0.8978982066981006 0.9109347077640905 1.0 20.221558351108737 -6.236858096726187 24.996394514573502 0.9255638756529425 0.8591138811910708 0.22713077846879337 0.07499788787882102 1589.1906269999522 1616028.5034569958 0.02592028077313063 0.02590996921699951 5.796180524209751e-07 6.236858096726187 -0.06644999446187172 SIYGEKFEDENFILK ddPTM_KYSE-520_SHP099_60min_R1 5 SIYGEKFEDENFILK 15 1 P62937;C9J5S7;F8WE65;P62937-2 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ;;;; 180.81 6.3934999999999995e-09 10494090000.0 13364850.0 12535050.0 8309400.0 8007180.0 12216860.0 11355490.0 8134570.0 8005880.0 10370850.0 8615200.0 False True 12623475.128332032 11932847.382506344 8845037.219510086 8768179.979753556 13178257.377575155 11284616.17480485 8956891.721352644 7978109.470866449 8487765.06785341 8538876.030524174 1.4783532496790586 1.3974728453545455 1.0358549752791197 1.0268541138681113 1.5433245933617548 1.3215575603235599 1.0489544161707205 0.9343278251548406 0.9940143219683649 1.0 23.02561475018798 -6.855254955467396 4.411591219452614 0.9771620999380892 1.2914001046214973 0.4770769112044656 0.15794567170042073 0.21852985568174882 7.578893425806997 0.0749939134572379 0.04994562239063123 1.3955488542837054e-07 6.855254955467396 0.3142380046834081 SIYYITGESK ddPTM_KYSE-520_SHP099_60min_R1 2 SIYYITGESK 10 0 P08238;Q58FF8 P08238;Q58FF8 HSP90AB1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta 2 0 ; 199.46 1.1599999999999999e-05 1661310000.0 2799000.0 3345500.0 1862550.0 1748520.0 2522000.0 3138800.0 2246800.0 2462500.0 2323000.0 2354300.0 False True 2643733.8903318336 3184777.1583021227 1982612.9531853686 1914698.815088295 2720467.051782907 3119209.58492126 2473928.470654886 2453958.162251823 1901201.758064524 2333442.7336176825 1.132975689629669 1.3648405047269205 0.8496514290331862 0.8205467344466677 1.1658597884530881 1.3367414335835677 1.060205350237758 1.0516470478996063 0.814762552632681 1.0 21.154028631038248 -7.596164587266545 5.630049348867349 0.9090655661045478 1.101897935780601 0.17131388663168456 0.17065566626742293 0.3982093758901679 22.083280923709797 0.12994273500734732 0.0471981627146248 2.5341680591457114e-08 7.596164587266545 0.1928323696760531 SKAELMEISEDKTK ddPTM_KYSE-520_SHP099_60min_R1 1 SKAELMEISEDKTK 14 2 P05455;E9PGX9;E9PFL9;E7ERC4 P05455 SSB Lupus La protein 0 75.911 0.009893700000000002 791250000.0 627670.0 700190.0 514740.0 363600.0 601740.0 531210.0 402950.0 534520.0 558910.0 349940.0 False True 592851.8938708763 666551.8213933834 547920.9640131196 398156.43467967364 649093.5145677428 527894.5213476552 443684.11841302604 532665.8748779055 457426.03297453455 346839.8038492 1.709296013005007 1.9217858331023296 1.5797522600703182 1.1479548490714324 1.8714504718436455 1.5220125126618242 1.2792191481169568 1.5357691619197762 1.3188394985179253 1.0 18.403909948315604 -5.31586874161458 0.05695554241495535 5.529082009457575e-21 3.2308010311115356 0.4962964666311215 0.20348193593886854 111.73631678843246 1.4942987102814094 31.4239982568072 54.33746886548274 4.832048207060597e-06 5.31586874161458 3.2308010311115356 SKAPSVS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SKAPSVSR 8 1 O15357;A0A0A0MTP6;O15357-2 O15357 INPPL1 Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 1 SKAPS(0.074)VS(0.926)R 71.223 0.014131 385970000.0 666080.0 629890.0 586940.0 529150.0 522200.0 494750.0 495540.0 590150.0 556420.0 596400.0 True False 629131.2146024394 599629.1389158344 624775.0915372043 579440.2569052514 563294.1690884354 491662.0817318062 545634.0192043446 588102.9073920461 455388.15420674277 591116.3599921793 1.064310273210444 1.0144011898499437 1.0569409575222555 0.9802473694230314 0.9529328017513978 0.8317517751298764 0.9230568736273236 0.9949020991397141 0.770386653167183 1.0 19.17308262423043 -5.661651658930909 2.062688292790794 0.9049482599063011 1.0418191080014696 0.45489973355561897 0.0661473406417394 0.28650413422858095 2.4942850867459483 0.021141269651564785 0.029442605094442686 2.1794571812850156e-06 5.661651658930909 0.13687084809516847 SKAS(ph)LEK ddPTM_KYSE-520_SHP099_60min_R1 1 SKASLEK 7 1 P53985;Q5T8R3;Q5T8R5;P53985-2 P53985 SLC16A1 Monocarboxylate transporter 1 1 S(0.037)KAS(0.963)LEK 69.672 0.044923000000000005 437800000.0 341450.0 357750.0 192460.0 450290.0 521270.0 475140.0 496610.0 429930.0 642600.0 593680.0 True False 322509.08783630043 340563.15300630254 204866.27954688802 493085.4262153747 562290.9833794119 472174.4750157659 546812.1852465384 428438.67317641666 525920.038627751 588420.4570760507 0.5480929222598689 0.5787751749805093 0.3481630814892113 0.837981447255573 0.9555938727445336 0.8024440165830935 0.9292881963413202 0.7281165500353141 0.8937827233966786 1.0 19.166487878760915 -5.335645007947965 7.1080578424889955 0.8705910716126717 0.5011956184600963 0.7861064839574645 0.09233751280567709 0.11292105847222943 9.358775586842368 0.025149227567573228 0.03748716782491823 4.616948094271056e-06 5.335645007947965 -0.3693954531525754 SKATEDGEEDEVS(ph)AGEK ddPTM_KYSE-520_SHP099_60min_R1 1 SKATEDGEEDEVSAGEK 17 1 Q9BXW9 Q9BXW9 FANCD2 Fanconi anemia group D2 protein 1 SKATEDGEEDEVS(1)AGEK 78.975 0.007662 0.0 140610.0 136650.0 106270.0 100830.0 99120.0 109610.0 85219.0 98756.0 116790.0 91263.0 True False 132810.0830009144 130085.12888416839 113120.33423801191 110412.85288435519 106920.18008434649 108925.88333223485 93833.76817729167 98413.43848582367 95583.88003631332 90454.48082153965 1.4682532229988627 1.4381280805847223 1.2505774529974962 1.2206454769464876 1.182032986240809 1.2042066058301522 1.0373589823860592 1.0879885395615336 1.056706966511627 1.0 16.46490435059826 -1.0000000000000193 0.2339248576881348 0.986713103024639 4.031997507117103 0.9323996502149566 0.03953621717943549 11.307530808758766 0.14918183476228172 0.056120259787658236 13.261777221454233 0.09999999999999555 1.0000000000000193 3.0452844040924636 SKDAS(ph)PINR ddPTM_KYSE-520_SHP099_60min_R1 9 SKDASPINR 9 1 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.007)KDAS(0.993)PINR;S(0.02)KDAS(0.98)PINR;S(0.001)KDAS(0.999)PINR;SKDAS(1)PINR;S(0.036)KDAS(0.964)PINR;SKDAS(1)PINR;SKDAS(1)PINR;SKDAS(1)PINR;SKDAS(1)PINR 107.53 0.00084036 9889360000.0 9658720.0 8246110.0 7409330.0 7982460.0 7927780.0 8147240.0 8131380.0 8154920.0 8670140.0 7903240.0 True False 9122931.547419025 7849954.497936549 7886947.267147168 8741110.598385885 8551651.183102101 8096390.053094777 8953379.245021256 8126632.485892638 7095861.132443206 7833223.442227686 1.1646458976567327 1.0021359094161246 1.0068584568429217 1.1159021139705938 1.091715466330436 1.0335962088670165 1.1430006192284756 1.0374569991305533 0.9058673207495302 1.0 22.90117468107233 -7.5841906865799995 6.187320830251022 0.9558060080506894 1.0751256571633374 0.44802947006924765 0.055462254934469594 0.18985160110687757 14.045218144903997 0.037775816766877086 0.013916360894479562 2.6050095119238792e-08 7.5841906865799995 0.11931964911264803 SKDAS(ph)PINRWS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 1 SKDASPINRWSPTR 14 2 Q13523;H0YDJ3 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 S(0.027)KDAS(0.973)PINRWS(0.596)PT(0.404)R 77.031 0.010503 2007900000.0 1571000.0 1487200.0 1311700.0 1209000.0 1222200.0 1254700.0 1026600.0 1165800.0 1633900.0 1396300.0 True False 1483853.4982891413 1415752.6796672882 1396254.280794205 1323902.9965008956 1318380.1866332546 1246868.951892668 1130378.746650483 1161756.1118997647 1337224.9472671673 1383929.8683049607 1.0722028133597314 1.0229945260169175 1.0089053735825062 0.9566257848906852 0.9526351131130717 0.9009625274002033 0.8167890386201235 0.8394616941989158 0.9662519596495177 1.0 20.40033940448649 -5.383046673511116 1.0101286480089366 0.8915073006617502 1.05841056900276 0.526804055023385 0.05273917021670804 0.45033674352683817 0.8960147631246397 0.021667491295745137 0.054358421313679205 4.1395518477677994e-06 5.383046673511116 0.16690326834100988 SKDDQVTVIGAGVTLHEALAAAELLK ddPTM_KYSE-520_SHP099_60min_R1 2 SKDDQVTVIGAGVTLHEALAAAELLK 26 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 170.82 2.6958e-10 147823000.0 163678.0 110341.0 92028.0 161958.0 162407.0 81601.0 97631.0 133687.0 124134.0 61928.0 False True 154598.45505599622 105040.05273478237 97960.27213000623 177350.43962555163 175187.50693057355 81091.69789064588 107500.49426673804 133223.27099978045 101594.3947634876 61379.36609925495 2.518736586591643 1.7113251473618167 1.5959805119459407 2.889414650173528 2.854175891085002 1.3211556756632945 1.751410956133073 2.1704895222337197 1.655188074102981 1.0 15.905466125872197 -8.501973295505532 0.4676858630414565 0.9266667409185487 2.18956828112901 0.3330827047217304 0.49531020338983445 2.729092652955649 1.1128002403063169 0.9778398787984904 0.3127541684430247 3.1479418731156784e-09 8.501973295505532 1.262901540210461 SKDEEEDEES(ph)DDADDTPILKPVSLLR ddPTM_KYSE-520_SHP099_60min_R1 16 SKDEEEDEESDDADDTPILKPVSLLR 26 2 A0A3B3IS53;A0A3F2YNX6;Q92794;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 S(0.004)KDEEEDEES(0.996)DDADDTPILKPVSLLR;SKDEEEDEES(1)DDADDTPILKPVSLLR;SKDEEEDEES(1)DDADDTPILKPVSLLR;SKDEEEDEES(1)DDADDTPILKPVSLLR;SKDEEEDEES(1)DDADDTPILKPVSLLR;SKDEEEDEES(1)DDADDTPILKPVSLLR;SKDEEEDEES(1)DDADDTPILKPVSLLR;SKDEEEDEES(1)DDADDTPILKPVSLLR;SKDEEEDEES(1)DDADDTPILKPVSLLR;SKDEEEDEES(1)DDADDTPILKPVSLLR;SKDEEEDEES(1)DDADDTPILKPVSLLR;SKDEEEDEES(1)DDADDTPILKPVSLLR;S(0.028)KDEEEDEES(0.972)DDADDTPILKPVSLLR;S(0.002)KDEEEDEES(0.939)DDADDT(0.059)PILKPVSLLR;SKDEEEDEES(0.999)DDADDT(0.001)PILKPVSLLR;SKDEEEDEES(1)DDADDTPILKPVSLLR 273.86 1.1001999999999998e-38 13929569000.0 6056190.0 5264503.0 4842290.0 4988880.0 5265240.0 4916880.0 4957970.0 5331650.0 6250790.0 4885830.0 True False 5720241.067984543 5011588.3736998895 5154431.7613379415 5463021.655238528 5679584.432882411 4886191.928095975 5459169.992724234 5313155.75056646 5115804.105592838 4842545.347318221 1.1812467736935877 1.0349078871249566 1.0644054710179311 1.1281302008382685 1.1728510577660856 1.009013148591768 1.1273348210869099 1.097182446315936 1.0564287453551562 1.0 22.207334128125815 -8.031053012552267 2.5332536934586476 1.000261283208717 1.0995543087040816 0.2725516513486913 0.05221884717892336 0.41093284938890534 6.227233067884137 0.0490629651164899 0.013330903475397067 9.309942258718026e-09 8.031053012552267 0.09929302549536456 SKDETRVS(ph)TNGSDDPEDAGAGENRR ddPTM_KYSE-520_SHP099_60min_R1 2 SKDETRVSTNGSDDPEDAGAGENRR 25 3 A0A590UK44;A0A590UJW8;A0A590UJQ1;Q96J02-3;Q96J02-2;Q96J02;A0A590UK95 A0A590UK44 ITCH E3 ubiquitin-protein ligase Itchy homolog 1 SKDET(0.024)RVS(0.929)T(0.024)NGS(0.024)DDPEDAGAGENRR;SKDET(0.037)RVS(0.913)T(0.025)NGS(0.025)DDPEDAGAGENRR 123.07 0.00023658 153197000.0 191752.0 204191.0 210367.0 199718.0 205008.0 218459.0 218279.0 230645.0 298840.0 231280.0 True False 181115.13431186476 194381.35786306043 223927.5934191006 218699.13867259384 221140.96326404065 217095.51634774834 240344.7715177491 229844.94632794752 244578.18914335017 229231.0391331172 0.7900986489298643 0.8479713680928735 0.976864190233257 0.9540555218859023 0.9647077642728018 0.947059862262712 1.0484826680830863 1.002678115481882 1.0669505755776847 1.0 17.806442880536675 -2.792660327905068 0.43473638955516364 1.0239100385332154 1.560768203396859e-13 0.8251503784238747 0.03361239576952123 6.893337807585308 0.37271826465821123 0.0230552159641967 4.775788146763904 0.0016119058523864313 2.792660327905068 -1.0239100385330593 SKDEYEKS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 10 SKDEYEKSR 9 2 Q13247;Q13247-3;A0A590UJP7 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 SKDEYEKS(1)R;SKDEYEKS(1)R;SKDEYEKS(1)R;SKDEYEKS(1)R;SKDEYEKS(1)R;SKDEYEKS(1)R;SKDEYEKS(1)R;SKDEYEKS(1)R;SKDEYEKS(1)R;SKDEYEKS(1)R 144.92 0.00048064 83606500000.0 69824300.0 59969600.0 49428800.0 53763700.0 60759200.0 64389900.0 59319400.0 58332100.0 70497900.0 63281900.0 True False 65951006.88770889 57088570.39979527 52615059.53687628 58873385.88335416 65540603.36744169 63988018.74987926 65315983.8535541 58129759.55991455 57697258.46743741 62721271.59857325 1.0514934599828665 0.9101947225364272 0.8388710591459555 0.9386510251283454 1.0449501691692835 1.0201964520013784 1.0413689357509752 0.9267949784557119 0.919899373799524 1.0 25.90245147287319 -4.238250088103223 23.246506821222294 0.9604254021101214 1.0514937270191058 0.1602669196765355 0.06275435333293694 5172.812089812393 5185367.14595193 0.01758905142860646 0.8269882121428858 5.7776324712547104e-05 4.238250088103223 0.09106832490898442 SKDEYEKS(ph)RS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 SKDEYEKSRSR 11 3 Q13247;Q13247-3 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 2 SKDEYEKS(1)RS(1)R;SKDEYEKS(1)RS(1)R;SKDEY(0.002)EKS(0.998)RS(1)R;SKDEY(0.002)EKS(0.998)RS(1)R 104.2 0.0016120000000000002 9877910000.0 10622590.0 10085040.0 9560160.0 9320340.0 9233620.0 9340520.0 8454480.0 8830170.0 12690750.0 7687920.0 True False 10033333.757091817 9600539.540446334 10176423.210396823 10206142.31133761 9960253.361888846 9282222.349990027 9309141.346173365 8799540.20124717 10386429.707773307 7619811.009911245 1.3167431244739867 1.2599445744728728 1.3355217336965628 1.3394219749101746 1.3071522835583902 1.2181696288682815 1.2217023931518476 1.1548239437699213 1.3630823250423751 1.0 22.8613237850946 -13.689451370924326 0.1824949414485868 7.881584799605101e-11 1.3326343908411034 0.6537455641432963 0.061508307439341554 73.23751519103155 0.7846295291861244 26.709702140159628 0.18863286560071207 2.044318830850677e-14 13.689451370924326 1.3326343907622875 SKDPGS(ph)AER ddPTM_KYSE-520_SHP099_60min_R1 1 SKDPGSAER 9 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;Q9ULU4-15;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57;Q5TH12;Q5TH08;Q5TH07 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 S(0.005)KDPGS(0.995)AER 53.967 0.062333000000000006 0.0 218330.0 216730.0 213330.0 202690.0 196350.0 197300.0 217900.0 163110.0 250060.0 205690.0 True False 206218.79966993516 206317.96548163766 227081.59314006852 221953.59665902914 211801.62792132204 196068.57751528086 239927.4584990652 162544.20948016012 204655.40749961935 203867.74662439848 1.011532246196198 1.0120186684642833 1.1138671854672466 1.088713640750401 1.0389168047829596 0.9617439774645342 1.1768779636393507 0.7973022323125396 1.0038635874887656 1.0 17.637274022887578 -7.259796914442614 24.999861122691563 0.9254371895101415 1.0548566020120893 0.34675936076815483 0.0776419898138446 152.20657953856897 2316776.6734502986 0.03691568334091778 0.01987713799106411 5.497979112310667e-08 7.259796914442614 0.12941941250194777 SKDQDDQKPGPSER ddPTM_KYSE-520_SHP099_60min_R1 2 SKDQDDQKPGPSER 14 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 0 ; 56.527 0.035913 1510210000.0 717490.0 791420.0 679540.0 509980.0 701110.0 770500.0 521190.0 651360.0 739040.0 563750.0 False True 677689.3994191453 753398.9952543607 723344.2357024426 558448.3458689224 756283.3682297831 765691.0236975363 573876.9715242208 649100.5841885676 604848.9656823112 558755.6135908626 1.2128547489016719 1.3483515457010187 1.2945628072599493 0.999450085664526 1.3535136826089342 1.370350480734853 1.0270625611010513 1.1616895981001423 1.0824928662375812 1.0 19.091857894977093 -6.772564484892731 24.999456632767167 1.0812853699158105 1.260596741457662 0.4391267047158901 0.10771476183395912 240.27874126360595 539930.292934837 0.046329067779151 0.031560268982503636 1.6882451669364862e-07 6.772564484892731 0.1793113715418515 SKDYDVYS(ph)DNDICSQESEDNFAK ddPTM_KYSE-520_SHP099_60min_R1 9 SKDYDVYSDNDICSQESEDNFAK 23 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 S(0.005)KDY(0.014)DVY(0.061)S(0.92)DNDICSQESEDNFAK;S(0.006)KDY(0.017)DVY(0.142)S(0.835)DNDICSQESEDNFAK;SKDYDVYS(1)DNDICSQESEDNFAK;S(0.001)KDYDVY(0.014)S(0.985)DNDICSQESEDNFAK;S(0.001)KDYDVYS(0.999)DNDICSQESEDNFAK;SKDYDVYS(1)DNDICSQESEDNFAK;SKDYDVYS(1)DNDICSQESEDNFAK;S(0.007)KDYDVYS(0.993)DNDICSQESEDNFAK;S(0.001)KDYDVYS(0.999)DNDICSQESEDNFAK 301.8 4.951899999999999e-49 7884070000.0 5979930.0 5579260.0 5456618.0 5776859.0 5720380.0 5292198.0 5085058.0 5279700.0 7105930.0 5314100.0 True False 5648211.362205092 5311223.974960001 5808360.327177487 6325889.942484004 6170541.361490047 5259167.429240834 5599105.288023586 5261385.952991246 5815672.237917983 5267021.208307243 1.0723730053140148 1.0083923654195737 1.1027789897668219 1.2010374920280735 1.1715429115337062 0.9985088765061318 1.0630496948052106 0.9989300868378679 1.1041672337953372 1.0 22.328555838016364 -6.273578225250081 24.988661215924928 1.034746716662145 1.1100323986345602 0.31489234506948305 0.05769802951933017 1106.8732413868706 2278570.572461015 0.022271130278033974 0.01979377739289494 5.326252790601303e-07 6.273578225250081 0.07528568197241525 SKEEVNDKR ddPTM_KYSE-520_SHP099_60min_R1 1 SKEEVNDKR 9 2 P35226;R4GMX3;Q5T8Z2 P35226 BMI1;COMMD3-BMI1 Polycomb complex protein BMI-1 0 91.584 0.0025811999999999996 304510000.0 279790.0 327070.0 130890.0 123720.0 445280.0 552890.0 160320.0 216610.0 194140.0 533390.0 False True 264269.49095246306 311357.0662579209 139327.3788314047 135478.31160222564 480321.00270336785 549439.2084258681 176526.71017241912 215858.63046715382 158889.06987113543 528664.5795711407 0.49988121233096755 0.5889501175026661 0.263545893209696 0.2562651572233709 0.9085552943475241 1.0392964266143572 0.3339106060701471 0.4083092357771747 0.3005479769422575 1.0 19.011993144093253 -5.741232155590374 24.99493412377554 0.6376688719223073 0.40560170777365473 0.18530138946667973 0.2663607001843234 527.0422291699018 651911.7743976873 0.08528387752848214 0.10996228153320745 1.8145454236961153e-06 5.741232155590374 -0.23206716414865253 SKEGHSLEMENENLVENGADS(ph)DEDDNSFLK ddPTM_KYSE-520_SHP099_60min_R1 4 SKEGHSLEMENENLVENGADSDEDDNSFLK 30 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 SKEGHSLEMENENLVENGADS(0.982)DEDDNS(0.018)FLK;SKEGHSLEMENENLVENGADS(1)DEDDNSFLK;SKEGHSLEMENENLVENGADS(1)DEDDNSFLK;SKEGHSLEMENENLVENGADS(1)DEDDNSFLK 439.61 4.834599999999999e-141 6904690000.0 1687300.0 2688750.0 2457040.0 5379270.0 1928530.0 1632370.0 1817830.0 1909210.0 2596380.0 1594030.0 True False 1593702.105450841 2559578.4141039704 2615424.7298029973 5890514.203463498 2080294.3391652994 1622181.773333095 2001593.9967111347 1902587.396122964 2124942.8414135054 1579908.134336573 1.0087308691021204 1.6200805340993927 1.655428358751538 3.7283903256419477 1.3167185445493297 1.0267570234482484 1.266905304941438 1.2042392559247685 1.3449787334032561 1.0 20.591409242922655 -5.970747646960434 24.999998425662394 1.1857349699124946 2.022406563958034 0.26868354618766055 0.6577628236674123 296.4591821743097 253362.24012559757 0.2124365956023507 0.2408774107734481 1.06967624940859e-06 5.970747646960434 0.8366715940455396 SKEGLTER ddPTM_KYSE-520_SHP099_60min_R1 2 SKEGLTER 8 1 Q15046-2;Q15046 Q15046-2 KARS Lysine--tRNA ligase 0 ; 89.04700000000001 0.028847 295100000.0 1371340.0 1242800.0 958770.0 755000.0 1120270.0 1143440.0 813220.0 997280.0 1036540.0 1037260.0 False True 1295269.0365014838 1183094.0225191687 1020573.8482862393 826754.9730009723 1208428.8755356232 1136303.366822468 895428.2138623673 993820.6684469016 848330.4650470101 1028070.6833760698 1.2599027065415038 1.1507905454846932 0.9927078602560558 0.8041810610589546 1.1754336497246252 1.1052774728396826 0.8709792316243088 0.9666851555218996 0.8251674508032728 1.0 19.971508027484855 -4.638606496226737 2.896562784263183 0.9682099691686313 1.2452987572777565 0.4450645820329199 0.10963139364421925 0.25569497079255304 4.091179430021234 0.0304640154033256 0.1107095966092047 2.2982300759399764e-05 4.638606496226737 0.2770887881091252 SKEQAELEAAR ddPTM_KYSE-520_SHP099_60min_R1 2 SKEQAELEAAR 11 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 126.95 0.00070147 511240000.0 1106290.0 1131350.0 779800.0 787250.0 1116420.0 1127200.0 790280.0 999490.0 996090.0 897800.0 False True 1044921.888365559 1076998.2478090285 830067.1557241136 862070.0033046578 1204275.902439124 1120164.7266863915 870169.2147895435 996023.0024727206 815225.1653854904 889846.1904778315 1.17427247489193 1.2103195578448223 0.9328209353555611 0.9687854064327022 1.3533528775264512 1.2588296029956403 0.9778872170282352 1.119320409674254 0.9161416592093619 1.0 19.763196462862535 -7.327565481413262 1.6605102343791378 0.9784905684162399 1.1363317277713962 0.19350417425148791 0.1303186309910348 0.7614447298819693 3.767687187791826 0.11373324333235246 0.04212722616002323 4.7036448045683924e-08 7.327565481413262 0.1578411593551563 SKES(ph)VPEFPLS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 4 SKESVPEFPLSPPK 14 1 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 2 S(0.363)KES(0.637)VPEFPLS(1)PPK;S(0.454)KES(0.546)VPEFPLS(1)PPK;S(0.361)KES(0.639)VPEFPLS(1)PPK;S(0.342)KES(0.658)VPEFPLS(1)PPK 88.176 0.0018440000000000002 1595900000.0 1554080.0 1610720.0 1330520.0 1459280.0 1531370.0 1608850.0 1602900.0 1632000.0 1885120.0 1726530.0 True False 1467872.0844183278 1533338.5934599903 1416287.4481072708 1597969.5324514688 1651880.1066965873 1598808.5703773948 1764936.7747964738 1626338.972911663 1542829.7280080067 1711234.287420013 0.8577855733778006 0.8960424675523352 0.8276408780019091 0.9338110767174314 0.9653149886256004 0.9343013882616157 1.0313823114527625 0.9503894264318741 0.9015888352342999 1.0 20.70660586401974 -5.444381767491697 4.572023187098587 0.9624517504560761 0.8645711452762108 0.6153098150370266 0.03644453572810349 0.15393494474007172 5.849112274623769 0.010545326615396327 0.015682340643079565 3.5943323568878617e-06 5.444381767491697 -0.0978806051798653 SKESVPEFPLS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 20 SKESVPEFPLSPPK 14 1 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKES(0.002)VPEFPLS(0.997)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;S(0.001)KES(0.001)VPEFPLS(0.999)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK;SKESVPEFPLS(1)PPK 209.66 1.6665e-13 481466650000.0 133652230.0 142994930.0 113963210.0 93862240.0 96811630.0 137825340.0 104965200.0 126463470.0 151764230.0 139549370.0 True False 126238274.3727848 136125238.92303428 121309460.8641832 102782879.06888865 104430154.49817523 136965120.9293459 115576106.77763249 126024797.73936571 124207671.49690442 138313071.149567 0.9126995252406409 0.9841820284348478 0.8770643284538402 0.7431176114782584 0.7550273710953034 0.9902543540605538 0.8356123236729553 0.9111560945898368 0.8980183178970157 1.0 27.043362262597913 -8.398609810720671 0.8530811111715083 1.0001900970508695 0.8697722494116503 0.19015413944972914 0.07791441883963375 2.4865533731098823 3.1704710898657718 0.08426977870949169 0.028347280929284235 3.993835649937353e-09 8.398609810720671 -0.13041784763921915 SKESVPEFPLS(ph)PPKK ddPTM_KYSE-520_SHP099_60min_R1 4 SKESVPEFPLSPPKK 15 2 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 SKESVPEFPLS(1)PPKK;SKESVPEFPLS(1)PPKK;SKESVPEFPLS(1)PPKK;SKESVPEFPLS(1)PPKK 111.66 0.00012058 6455820000.0 5298920.0 4512780.0 4695190.0 4188400.0 4355030.0 4946300.0 4269670.0 4862390.0 6211620.0 4869680.0 True False 5004978.344464868 4295979.274979128 4997849.459969614 4586464.276711622 4697746.084268885 4915428.306963172 4701289.911563577 4845523.503980363 5083746.390197494 4826538.423753711 1.036970579128298 0.8900746037442803 1.0354935610525338 0.9502595595508845 0.9733157952600195 1.018416901598046 0.9740500331306333 1.0039334774863113 1.0532903592309426 1.0 22.202557433479353 -7.062413595932538 1.0440326877449855 1.023453426348033 0.9761239758953209 0.1208949431110301 0.0433252959533455 1.045986811544329 2.0867812989106946 0.03377243643086854 0.015121471618520245 8.661366264551551e-08 7.062413595932538 -0.047329450452712196 SKESVPEFPLS(ph)PPKKK ddPTM_KYSE-520_SHP099_60min_R1 2 SKESVPEFPLSPPKKK 16 3 P16949;P16949-2;A2A2D0 P16949 STMN1 Stathmin 1 SKESVPEFPLS(1)PPKKK;SKESVPEFPLS(1)PPKKK 114.72 0.00024783 16204500000.0 4429000.0 5575800.0 6798300.0 3364800.0 3848900.0 3560200.0 2641600.0 2191430.0 7156700.0 3037100.0 True False 4183314.541007386 5307930.198553576 7236529.295664591 3684589.580335988 4151786.532754648 3537979.4712108662 2908638.707531576 2183828.4408136057 5857223.685725522 3010193.656828043 1.3897160840527136 1.7633185115892998 2.4040078880805296 1.2240373877535116 1.3792423365643343 1.1753328438473196 0.9662629847531207 0.7254777232886703 1.9457963019885918 1.0 21.521424873172354 -5.401883165333384 9.814905990725833 1.1839113026968309 1.8429756991433455 0.38152325122967756 0.3790359372522409 0.38846576289969403 29.67336327275414 0.10633231512938443 0.1577608464986536 3.96384656011479e-06 5.401883165333384 0.6590643964465146 SKETSSPGTDDVFTPAPSDS(ph)PSSQR ddPTM_KYSE-520_SHP099_60min_R1 1 SKETSSPGTDDVFTPAPSDSPSSQR 25 1 P19634 P19634 SLC9A1 Sodium/hydrogen exchanger 1 1 SKETSSPGTDDVFTPAPS(0.016)DS(0.979)PS(0.005)S(0.001)QR 129.05 5.5573999999999993e-05 681480000.0 626110.0 743960.0 576280.0 837770.0 761440.0 807200.0 665220.0 943050.0 1371700.0 683620.0 True False 591378.4301806592 708219.0448932741 613427.930880601 917391.4089152649 821360.9959990388 802161.9653843638 732466.9295215606 939778.7796595255 1122633.8577430528 677563.6586483126 0.8728012824070489 1.045243551441523 0.9053436131807049 1.3539560411864329 1.2122270513114457 1.1838916611682144 1.081030424481112 1.3869970262784046 1.6568684630793526 1.0 19.369996971754695 -4.819122958812416 0.6434577478484065 1.3019808115977505 0.7680617486847133 0.35041714290465376 0.18566900472734538 2.1556897853345824 1.0790659640055038 0.0984597772418425 0.7691504671453737 1.5166209162098355e-05 4.819122958812416 -0.5339190629130371 SKEYFSK ddPTM_KYSE-520_SHP099_60min_R1 4 SKEYFSK 7 1 Q06830;A0A0A0MRQ5 Q06830 PRDX1 Peroxiredoxin-1 0 ;;; 105.52 0.004326600000000001 19891200000.0 26287100.0 23969200.0 16188800.0 14668290.0 23069000.0 23176000.0 17499100.0 20549800.0 20397900.0 17379100.0 False True 24828902.160965323 22817683.6534973 17232355.950995825 16062359.8714178 24884399.055344895 23031349.98729928 19268079.802758105 20478517.540159356 16694155.549214121 17225134.6947352 1.4414344271313122 1.324673743217314 1.0004192278544466 0.9324954582983437 1.4446562825979365 1.3370780777893556 1.118602562141202 1.188874159945962 0.9691741658378225 1.0 24.038011928573134 -6.119374085915384 0.03051424220940303 6.013879985126245e-06 2.3816221767034853 0.2153771659454996 0.1676032417756031 552.2074381550244 6.063749011025588 214.30836144034066 257.4347047497092 7.59671640741756e-07 6.119374085915384 2.3816161628235 SKFDNLYGCR ddPTM_KYSE-520_SHP099_60min_R1 4 SKFDNLYGCR 10 1 P23526;P23526-2 P23526 AHCY Adenosylhomocysteinase 0 ;;; 152.85 0.00014562 4194990000.0 6754650.0 6188970.0 4128330.0 4208520.0 6986060.0 5969830.0 4923760.0 5008010.0 4906930.0 4794200.0 False True 6379956.099439048 5891642.5913666375 4394448.757361551 4608496.475462319 7535823.176755957 5932570.076574005 5421501.712066811 4990638.382188325 4015955.2056390727 4751727.117831155 1.3426604561313846 1.239894978240202 0.9248108421190909 0.9698571406107575 1.5859124461245484 1.2485081591305323 1.140953926357068 1.0502788267155831 0.8451569515785005 1.0 22.18002055675582 -7.363180012995548 2.4001883373714117 0.927220625064115 1.208827584634863 0.2974441376497835 0.17804901518255756 0.4376199272728988 4.744490571179812 0.13927782886158527 0.05406990949907936 4.333312274267148e-08 7.363180012995548 0.2816069595707481 SKFDS(ph)DEEEEDTENVEAASSGK ddPTM_KYSE-520_SHP099_60min_R1 7 SKFDSDEEEEDTENVEAASSGK 22 1 Q8TF01;Q8TF01-2 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.058)KFDS(0.942)DEEEEDTENVEAASSGK;S(0.015)KFDS(0.985)DEEEEDTENVEAASSGK;S(0.164)KFDS(0.836)DEEEEDTENVEAASSGK;S(0.013)KFDS(0.987)DEEEEDTENVEAASSGK;S(0.01)KFDS(0.99)DEEEEDTENVEAASSGK;S(0.089)KFDS(0.911)DEEEEDTENVEAASSGK;S(0.01)KFDS(0.99)DEEEEDTENVEAASSGK 327.42 3.879199999999999e-55 10846580000.0 5751040.0 5192070.0 4808960.0 4880930.0 5317460.0 5296720.0 5104000.0 5518630.0 6361080.0 5108010.0 True False 5432018.346785987 4942635.163744046 5118953.256208055 5344812.119694885 5735913.849791255 5263661.205761477 5619962.1302397 5499487.1605879245 5206068.221777485 5062757.005371642 1.0729368091382925 0.9762734333288867 1.0110999304878325 1.055711762192809 1.1329625031786803 1.0396827657690608 1.1100596225094068 1.0862633056954751 1.0283069513811915 1.0 22.27149181091771 -5.376371682333721 4.637628767562072 1.0730453998606255 1.0160454599300712 0.172890496607769 0.04301624892311633 0.30203573554360424 10.205038562121063 0.011794104964211629 0.017826803229514816 4.203667118652085e-06 5.376371682333721 -0.0569999399305543 SKFEDMAK ddPTM_KYSE-520_SHP099_60min_R1 2 SKFEDMAK 8 1 P26583;D6R9A6 P26583 HMGB2 High mobility group protein B2 0 ; 120.68 0.0010323 2033740000.0 3647200.0 3834700.0 2264650.0 2416180.0 4117400.0 3779800.0 3130300.0 3473300.0 3247900.0 3482200.0 False True 3444882.5454870528 3650475.2559979544 2410632.962568118 2645813.0207489915 4441415.955198632 3756208.8661543783 3446741.272783959 3461251.9329743115 2658163.232896156 3451350.417110607 0.9981259881374291 1.0576947614186478 0.6984607968570881 0.7666022573749572 1.2868632327739369 1.0883301931708782 0.9986645388704092 1.0028688816454614 0.7701806283470661 1.0 21.718729527989733 SKFENEEFFR ddPTM_KYSE-520_SHP099_60min_R1 3 SKFENEEFFR 10 1 Q13951-2;A0A494C0A9;Q13951;H3BSC0;J3KRT0 Q13951-2 CBFB Core-binding factor subunit beta 0 ;; 181.66 1.023e-05 2461250000.0 3187140.0 2893000.0 1875390.0 1755780.0 3262770.0 2934060.0 2342600.0 2499400.0 2356480.0 2672160.0 False True 3010342.990793924 2754015.937518471 1996280.6401300936 1922648.8033054965 3519531.436378157 2915747.443205707 2579412.8695727848 2490730.164764347 1928602.6340266452 2648486.741309024 1.136627548041283 1.0398450913736834 0.7537438677693454 0.7259423931853329 1.3288839175530915 1.1009107192149237 0.9739194949859937 0.9404352024557596 0.7281904054665671 1.0 21.336736855646617 -7.529117702113748 23.991525005047045 0.8541676737608127 1.0015464365064115 0.09588307321945455 0.17663552021503234 259.7102440291648 998644.2547682833 0.12590032568121842 0.047913960785121744 2.95721089720407e-08 7.529117702113748 0.1473787627455988 SKFS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 2 SKFSPQK 7 1 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 S(0.05)KFS(0.95)PQK;S(0.001)KFS(0.999)PQK 53.751000000000005 0.042744 830150000.0 2314200.0 2050100.0 1899700.0 1795690.0 2021620.0 2101700.0 1941930.0 1989130.0 2394900.0 2075330.0 True False 2185826.7127566705 1951610.1187371633 2022157.7016274715 1966351.8377061144 2180709.992555654 2088582.510713969 2138239.2358104163 1982230.1722964307 1960046.5305160284 2056944.1907823067 1.0626572770189484 0.9487909917453413 0.9830882678729338 0.955957797259566 1.0601697422457905 1.0153812242808733 1.0395222414844376 0.9636771776207207 0.9528924213401114 1.0 20.97207122037036 -7.296481478770272 24.491040119060123 0.9687135815209023 1.0061573401974122 0.1578626487167466 0.03860760148352631 957.2140546654731 668994.4703639519 0.02150810557909049 0.010332729016968465 5.052641923348982e-08 7.296481478770272 0.03744375867650995 SKGDSDPKPGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 SKGDSDPKPGSPK 13 2 Q9BVI0 Q9BVI0 PHF20 PHD finger protein 20 1 SKGDSDPKPGS(1)PK;SKGDS(0.001)DPKPGS(0.999)PK;SKGDSDPKPGS(1)PK;SKGDSDPKPGS(1)PK 130.39 2.8972e-05 8894700000.0 11755100.0 10795400.0 10889500.0 10588800.0 11252800.0 11261500.0 10647100.0 11505900.0 13371400.0 11626800.0 True False 11103021.169789126 10276772.779774254 11591454.59381603 11595156.368361196 12138331.340326209 11191212.801258685 11723412.773682408 11465988.718397252 10943490.825563505 11523795.59751352 0.9634864724765525 0.891787145373497 1.0058712423116138 1.0061924710694343 1.0533275462596097 0.9711394745385283 1.0173221725845225 0.9949836945104493 0.9496429134793726 1.0 23.458112640350517 -4.7772191149004035 24.989668148498474 1.0013715806080952 0.9276368116215485 0.4747237504129046 0.030331920701953962 166.16736441755165 263152.49439994554 0.007791690071097013 0.016306342296282344 1.6702477104410758e-05 4.7772191149004035 -0.07373476898654663 SKGGVVGIK ddPTM_KYSE-520_SHP099_60min_R1 2 SKGGVVGIK 9 1 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;H3BUH7;H3BR04;H3BMQ8;H3BU78 P04075 ALDOA Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase 0 ; 130.98 0.0015186 0.0 3218200.0 2856800.0 2159340.0 1887580.0 2672300.0 2718400.0 1892540.0 2548400.0 2604100.0 2268100.0 False True 3039680.0306773507 2719555.039855777 2298534.5114661576 2066975.0356783776 2882594.8066928876 2701433.4572607228 2083856.412610469 2539560.195201029 2131261.08401887 2248006.3985550986 1.3521669834352334 1.2097630334165264 1.0224768545781435 0.9194702635219016 1.2822894136536576 1.2017018541393225 0.9269797514588318 1.1296943802443473 0.9480671787183228 1.0 21.10021471126672 -4.51904081729451 3.2390076772080487 1.0630780409462193 1.3410513799080679 0.4100679511463645 0.11436397551838019 0.262298983663296 5.3713633820566855 0.0306878679252427 0.1330059889946708 3.0266289561215332e-05 4.51904081729451 0.2779733389618486 SKGHYEVTGS(ph)DDETGK ddPTM_KYSE-520_SHP099_60min_R1 3 SKGHYEVTGSDDETGK 16 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 SKGHYEVT(0.009)GS(0.991)DDETGK;SKGHYEVT(0.01)GS(0.978)DDET(0.012)GK;SKGHYEVT(0.003)GS(0.997)DDETGK 145.04 8.116e-06 955960000.0 594700.0 696570.0 649990.0 1334840.0 607810.0 528630.0 506480.0 632580.0 768030.0 557240.0 True False 561710.8054949407 663105.7316271139 691889.3954207714 1461702.792265719 655641.1890341674 525330.6240846574 557679.9411684566 630385.7276252819 628575.1124607403 552303.2871261593 1.017033247109088 1.2006188394740527 1.2527345238536076 2.646558197890702 1.1871035431378907 0.9511633124947513 1.009734966580181 1.1413760198774388 1.138097721147835 1.0 19.075101188314186 -5.982787886271858 24.99981270582282 1.0561382113660729 1.539865443481809 0.2310961958607869 0.41544700217191816 386.22631443157843 560973.3189312263 0.13609090071163338 0.15428083035909793 1.040428197195714e-06 5.982787886271858 0.4837272321157362 SKGQENDHVHEK ddPTM_KYSE-520_SHP099_60min_R1 2 SKGQENDHVHEK 12 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 0 ; 175.21 5.1657e-06 1192800000.0 1169930.0 1339500.0 567910.0 596610.0 1598150.0 1497470.0 750060.0 874640.0 803420.0 982190.0 False True 1105031.650702364 1275148.4093695106 604518.3872881279 653311.6350226621 1723915.3127703618 1488123.7342717072 825883.3846801685 871606.0779825102 657539.1805700394 973488.5607322562 1.1351254604072198 1.3098750830829964 0.620981500628431 0.6711035561950953 1.7708634516194377 1.5286504580519606 0.8483750277033976 0.8953429070875675 0.6754462323372755 1.0 19.892804500663523 -6.920058965432309 24.999999999791534 0.8455486210573862 1.160820991309242 0.1777716192664337 0.3341926330685968 61.57780429049435 19253.01590177907 0.15453082909397348 0.10418465597217329 1.2021012107389182e-07 6.920058965432309 0.31527237025185584 SKGQES(ph)FK ddPTM_KYSE-520_SHP099_60min_R1 4 SKGQESFK 8 1 P06748;P06748-3 P06748 NPM1 Nucleophosmin 1 SKGQES(1)FK;SKGQES(1)FK;S(0.004)KGQES(0.996)FK;SKGQES(1)FK 95.656 0.0022658 3925510000.0 6884200.0 5795400.0 5165610.0 5166040.0 5884100.0 5495150.0 5331410.0 5419500.0 6260200.0 5824800.0 True False 6502319.702687532 5516980.284927245 5498593.485868222 5657018.88837344 6347145.194050676 5460852.730527603 5870360.952347416 5400701.019420805 5123505.486799631 5773196.803625828 1.1262944818724665 0.9556196458541536 0.95243479010015 0.9798763286262089 1.0994160445152992 0.9458975531715706 1.016830215914442 0.9354784191713198 0.8874642006975821 1.0 22.46093897581928 -7.268125689080395 22.502592216459487 0.9336034445865974 1.0062442915617404 0.20110183055424657 0.06288183353510918 216.79552401959774 729601.1737158456 0.032666900728902534 0.01632299369762113 5.393545054442146e-08 7.268125689080395 0.07264084697514306 SKGQES(ph)FKK ddPTM_KYSE-520_SHP099_60min_R1 2 SKGQESFKK 9 2 P06748;P06748-3 P06748 NPM1 Nucleophosmin 1 SKGQES(1)FKK;SKGQES(1)FKK 104.17 0.0011414 7264700000.0 11884200.0 10453400.0 9405200.0 9175600.0 10232700.0 9496500.0 8732500.0 9876300.0 11953600.0 9366800.0 True False 11224959.735434648 9951202.97312672 10011474.240852064 10047646.265255272 11037955.273901265 9437228.820952196 9615266.320987085 9842041.420445738 9783127.565734027 9283817.439260121 1.209088805211278 1.0718869730294682 1.0783790511126135 1.0822752958028896 1.1889457484615231 1.0165246012963716 1.0357017879655095 1.0601287115820435 1.053782846306562 1.0 23.14628672254689 -6.286768018376975 24.981284104338744 1.037140266009063 1.118014951260688 0.5029940399408269 0.04573146194126547 753.6308673914582 743292.9851876305 0.0161652080530122 0.01426144876464289 5.166922905973075e-07 6.286768018376975 0.08087468525162511 SKGQESFK ddPTM_KYSE-520_SHP099_60min_R1 4 SKGQESFK 8 1 P06748;P06748-3 P06748 NPM1 Nucleophosmin 0 ;;; 100.48 0.0028921999999999997 23422600000.0 25797400.0 24583100.0 14416130.0 13375650.0 23599300.0 26362200.0 17398520.0 20994400.0 20788190.0 24444200.0 False True 24366366.79615806 23402090.97601461 15345416.806423536 14646867.754464192 25456430.648350675 26197663.73123843 19157332.19479193 20921575.32652981 17013578.723624382 24227643.405299842 1.0057258309666168 0.9659251865534457 0.6333846239071975 0.6045518959248081 1.0507183972660763 1.0813129157046963 0.7907220638141483 0.863541491697586 0.7022382837243936 1.0 24.53015074655624 -2.862659968082152 15.026581638201774 0.8634637986905319 1.0051218866410043 0.0 0.1682730849950606 0.0 0.0 0.040696685796017304 0.0 0.0013719555216631892 2.862659968082152 0.1416580879504724 SKHEEEEWT(ph)DDDLVESL ddPTM_KYSE-520_SHP099_60min_R1 5 SKHEEEEWTDDDLVESL 17 1 D6RHI7;P51946 D6RHI7 CCNH Cyclin-H 1 S(0.012)KHEEEEWT(0.988)DDDLVESL;S(0.001)KHEEEEWT(0.999)DDDLVESL;S(0.014)KHEEEEWT(0.986)DDDLVESL;S(0.002)KHEEEEWT(0.998)DDDLVESL;S(0.084)KHEEEEWT(0.916)DDDLVESL 161.08 1.2654000000000002e-07 1306120000.0 1677940.0 2127670.0 2219970.0 4748130.0 1917540.0 1788920.0 1607440.0 1617420.0 2161680.0 1710920.0 True False 1584861.3233095363 2025453.539502221 2363072.81827759 5199390.847622663 2068439.4886898482 1777754.6867138187 1769935.7223026052 1611809.5475286657 1769173.4035182619 1695762.579875618 0.9346009530566383 1.1944204710843338 1.3935163131450385 3.066107784973078 1.2197695085603113 1.0483511712142006 1.0437402872944794 0.9504924608295637 1.0432907439483825 1.0 20.693502764689306 -5.985286522854158 24.996369812472764 1.028887297308083 1.6649842393579082 0.240276051336073 0.5291048260326924 371.9305203726381 631860.251794691 0.17502906589447503 0.19839077614081377 1.0344594638482595e-06 5.985286522854158 0.6360969420498253 SKIYQAFYSEVFS(ph)LWK ddPTM_KYSE-520_SHP099_60min_R1 1 SKIYQAFYSEVFSLWK 16 1 Q5TEA3 Q5TEA3 C20orf194 Uncharacterized protein C20orf194 1 S(0.091)KIYQAFYS(0.107)EVFS(0.801)LWK 49.606 0.058612 745610000.0 764020.0 904000.0 732190.0 491180.0 690170.0 952350.0 562530.0 844710.0 1103000.0 843590.0 True False 721638.2875638888 860570.4830683352 779388.1389454206 537861.5995213486 744482.4524698682 946406.0303937034 619396.0221637414 841779.8981667955 902723.0043672728 836116.4489030894 0.8630834718185657 1.029247163116247 0.9321526205684731 0.6432855139101441 0.8904052221990886 1.1319069630017495 0.7408011443577435 1.006773517338567 1.0796618169054866 1.0 19.673344359991134 -6.024903294122553 24.761275633574 0.9804065155403481 0.8686497987969858 0.17270218428529505 0.13112514039944148 1421.6641367155605 1413554.5339696456 0.044789175335223086 0.045001710240829676 9.442711170432674e-07 6.024903294122553 -0.1117567167433623 SKLNLAQFLNEDLS(ph) ddPTM_KYSE-520_SHP099_60min_R1 2 SKLNLAQFLNEDLS 14 1 Q9BPX3 Q9BPX3 NCAPG Condensin complex subunit 3 1 SKLNLAQFLNEDLS(1);SKLNLAQFLNEDLS(1) 96.103 0.0028598000000000004 2526500000.0 4957900.0 5279800.0 4727900.0 4297300.0 4606100.0 4516400.0 3883700.0 3999400.0 6175500.0 4466000.0 True False 4682875.40367138 5026150.482858627 5032667.998907466 4705714.099969645 4968573.864875989 4488211.4723264845 4276302.297259381 3985527.014866975 5054184.871686392 4426434.714495421 1.0579339142484543 1.1354850589797005 1.1369574665648605 1.0630935286495147 1.1224776112940744 1.0139563241786353 0.9660827670756341 0.9003921376758165 1.1418184606078685 1.0 22.077713712656823 -6.348530987398742 4.617984566860476 0.9935689950365342 1.1045852167275914 0.3887808098985279 0.06149242427713141 0.2200721922786924 8.23295028206447 0.02162512091883372 0.019024745636119757 4.481970694917409e-07 6.348530987398742 0.11101622169105718 SKLPDGPT(ph)GS(ph)SEEEEEFLEIPPFNK ddPTM_KYSE-520_SHP099_60min_R1 5 SKLPDGPTGSSEEEEEFLEIPPFNK 25 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 SKLPDGPT(0.868)GS(0.603)S(0.528)EEEEEFLEIPPFNK;S(0.012)KLPDGPT(0.663)GS(0.663)S(0.663)EEEEEFLEIPPFNK;SKLPDGPT(0.905)GS(0.654)S(0.441)EEEEEFLEIPPFNK;SKLPDGPT(0.867)GS(0.607)S(0.525)EEEEEFLEIPPFNK;SKLPDGPT(0.894)GS(0.684)S(0.422)EEEEEFLEIPPFNK 159.89 3.7195e-10 3592160000.0 1942360.0 1753180.0 1567910.0 1626480.0 1594800.0 1633500.0 1499080.0 1618920.0 2095360.0 1670470.0 True False 1834613.4188013335 1668954.601223169 1668979.9873446987 1781060.1701809575 1720301.6868292529 1623304.7205839427 1650621.6360109176 1613304.3443787673 1714895.4437271124 1655670.9354059955 1.108078531529853 1.008023131609734 1.0080384644400608 1.0757331859209178 1.0390359883966973 0.9804512997541289 0.9969503001550005 0.9744112250078008 1.035770699995162 1.0 20.658984535016454 -6.184093643985331 6.2156668467396825 0.9959684878030043 1.0453450873289076 0.38691735100820934 0.0315782963126684 0.26612814597236845 17.25230380931628 0.010417650030869795 0.010405402058955146 6.544950345083752e-07 6.184093643985331 0.04937659952590334 SKLPDGPT(ph)GSSEEEEEFLEIPPFNK ddPTM_KYSE-520_SHP099_60min_R1 5 SKLPDGPTGSSEEEEEFLEIPPFNK 25 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 S(0.019)KLPDGPT(0.327)GS(0.327)S(0.327)EEEEEFLEIPPFNK;S(0.001)KLPDGPT(0.434)GS(0.434)S(0.132)EEEEEFLEIPPFNK;S(0.005)KLPDGPT(0.367)GS(0.261)S(0.367)EEEEEFLEIPPFNK;S(0.024)KLPDGPT(0.325)GS(0.325)S(0.325)EEEEEFLEIPPFNK;SKLPDGPT(0.555)GS(0.24)S(0.205)EEEEEFLEIPPFNK 173.03 5.2237e-10 2383500000.0 3003260.0 2685740.0 2384500.0 2162900.0 2308310.0 2625920.0 2054220.0 2431520.0 3222500.0 2555890.0 True False 2836663.1809496214 2556713.019022073 2538208.685334895 2368461.3657004028 2489960.864512687 2609530.6592444363 2261880.604855207 2423085.6246410357 2637375.2326142644 2533246.8030523276 1.1197737139277961 1.0092632963915995 1.0019587046459857 0.9349508949726597 0.9829128616732152 1.0301130770599192 0.8928781049402097 0.9565138389680161 1.041104731460224 1.0 21.27255620863055 -4.072337223988566 1.5178113076588187 0.9746253832649135 1.2326997967385915 0.5026752927357325 0.04161833942952047 1.4810276658192731 2.235086270903118 0.011762578552505466 0.6529224212739421 8.465698084717098e-05 4.072337223988566 0.258074413473678 SKLPDGPTGS(ph)S(ph)EEEEEFLEIPPFNK ddPTM_KYSE-520_SHP099_60min_R1 4 SKLPDGPTGSSEEEEEFLEIPPFNK 25 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 2 S(0.008)KLPDGPT(0.317)GS(0.838)S(0.838)EEEEEFLEIPPFNK;S(0.015)KLPDGPT(0.559)GS(0.731)S(0.695)EEEEEFLEIPPFNK;S(0.039)KLPDGPT(0.595)GS(0.694)S(0.671)EEEEEFLEIPPFNK;S(0.014)KLPDGPT(0.592)GS(0.71)S(0.684)EEEEEFLEIPPFNK 94.73 0.0024613000000000005 1608627000.0 1509465.0 1387780.0 1311083.0 1278860.0 1185628.0 1272661.0 1161479.0 1374194.0 1653300.0 1311477.0 True False 1425731.9674061222 1321108.9656997512 1395597.5079869693 1400402.469896721 1278930.178299471 1264717.8506293723 1278892.6322626693 1369427.24175329 1353102.3963013687 1299858.3340936669 1.0968364244094504 1.0163484212461518 1.0736535446842037 1.0773500720547051 0.9838996641054826 0.9729659128671153 0.9838707793910357 1.0535203766709935 1.040961434651128 1.0 20.30992296808759 -5.75680418839284 24.999523144912548 1.0058005773042622 1.0630405306273918 0.48404600457940095 0.030373527999547015 117.65702652458079 634567.2544866151 0.009820909111755819 0.012272098254197148 1.7506358249408748e-06 5.75680418839284 0.05723995332312959 SKLS(ph)PS(ph)PSLR ddPTM_KYSE-520_SHP099_60min_R1 8 SKLSPSPSLR 10 1 Q5T200-2;Q5T200;A0A087WX14 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.009)KLS(0.991)PS(0.992)PS(0.008)LR;S(0.127)KLS(0.874)PS(0.989)PS(0.01)LR;S(0.305)KLS(0.695)PS(0.823)PS(0.176)LR;S(0.042)KLS(0.958)PS(0.969)PS(0.031)LR;S(0.029)KLS(0.971)PS(0.991)PS(0.009)LR;S(0.001)KLS(0.999)PS(0.996)PS(0.004)LR;S(0.008)KLS(0.992)PS(0.718)PS(0.283)LR;S(0.005)KLS(0.995)PS(0.996)PS(0.004)LR 169.09 0.00015428 15766780000.0 19619100.0 17575070.0 16703660.0 16996740.0 17231660.0 16962280.0 16627420.0 18203500.0 21154500.0 16932850.0 True False 18530789.413293764 16730737.25648209 17780404.650400955 18612105.05934377 18587693.60726624 16856412.118681688 18308281.88158115 18140356.30722884 17313376.061548024 16782838.12255795 1.104151114249644 0.996895586688295 1.0594396800206378 1.1089962808094471 1.107541732305835 1.0043838828442757 1.0908930746923453 1.0808872834712169 1.0316119320889459 1.0 24.000483372784792 -7.981465525971438 4.214778166454367 1.000199391809957 1.0674171926055651 0.2572526230013752 0.03801750203547972 0.24932348396960693 11.366752789952635 0.03694653893505661 0.009694365460853494 1.0436009698432023e-08 7.981465525971438 0.06721780079560813 SKLS(ph)PS(ph)PSLRK ddPTM_KYSE-520_SHP099_60min_R1 1 SKLSPSPSLRK 11 2 Q5T200-2;Q5T200;A0A087WX14 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.01)KLS(0.99)PS(0.99)PS(0.011)LRK 88.101 0.0034335 0.0 581060.0 610770.0 506220.0 503830.0 579650.0 563610.0 510740.0 551820.0 712070.0 530400.0 True False 548827.4434856073 581427.6924155394 538851.7511806377 551713.8517179872 625265.1572426498 560092.3009294854 562370.5835420494 549905.865215756 582776.0378239377 525701.0686449554 1.0439914929225127 1.1060043950723264 1.0250155141772481 1.0494820814043277 1.189392973566385 1.0654197496177373 1.0697535483266434 1.0460428901793766 1.1085692470173183 1.0 19.003883142059575 -10.71526632178993 6.505937841075494 0.9989002616334416 1.0782978479173508 0.21446012748122045 0.04489059094425077 0.0007286498661020489 3.1889518634970086e-05 0.044228539215523166 0.010581233041854729 1.9263432621670133e-11 10.71526632178993 0.07939758628390925 SKLS(ph)PSPS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 2 SKLSPSPSLR 10 1 Q5T200-2;Q5T200;A0A087WX14 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.001)KLS(0.999)PS(0.003)PS(0.997)LR;SKLS(1)PS(0.031)PS(0.969)LR 192.39 2.4233000000000003e-07 1080310000.0 2758760.0 2444210.0 2243900.0 2438390.0 2390020.0 2406400.0 2376730.0 2652230.0 2992410.0 2297400.0 True False 2605726.0833482835 2326786.482765993 2388545.3843669384 2670133.852471316 2578100.9766463875 2391380.7649912443 2616993.0630494864 2643030.0331651373 2449063.77651738 2277046.823350152 1.1443445328517907 1.0218439335132603 1.0489663013836237 1.1726301914788149 1.1322125439885788 1.0502115022267642 1.1492925996133805 1.1607271339622807 1.0755438805224675 1.0 21.118732527518304 -5.210141887891819 24.999689330367293 1.11309587966183 1.0667308127692146 0.05536583943571649 0.05830806482280007 782.8979764723058 381541.9183527081 0.015281690200290153 0.026468613945551823 6.1639358766289335e-06 5.210141887891819 -0.046365066892615436 SKLS(ph)PSPSLR ddPTM_KYSE-520_SHP099_60min_R1 6 SKLSPSPSLR 10 1 Q5T200-2;Q5T200;A0A087WX14 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.334)KLS(0.507)PS(0.079)PS(0.079)LR;S(0.003)KLS(0.938)PS(0.06)PSLR;S(0.011)KLS(0.877)PS(0.112)PSLR;S(0.004)KLS(0.655)PS(0.34)PSLR;S(0.011)KLS(0.787)PS(0.19)PS(0.011)LR;S(0.001)KLS(0.998)PS(0.001)PSLR 156.24 6.7536e-05 8880000000.0 10821510.0 10456610.0 9411930.0 9167100.0 8924920.0 9580010.0 9126030.0 9583840.0 10993960.0 9338770.0 True False 10221219.26815463 9954258.759908404 10018638.067420445 10038338.427810896 9627260.428151589 9520217.604065718 10048578.173869781 9550595.895925071 8997733.999178244 9256035.763253128 1.1042761209645844 1.0754343451682904 1.0823897318109856 1.084518111702155 1.0401062262931438 1.0285415752023566 1.085624389413347 1.031823573310008 0.9720936942464771 1.0 23.14196300803149 -6.722185055544151 0.4003629047240533 0.9880958097602434 1.0996549742810966 0.6574246536052752 0.023816944594272672 0.8422398795372383 0.31658572462678186 0.027747998600903594 0.03321555462253933 1.895897895342009e-07 6.722185055544151 0.11155916452085324 SKLSPS(ph)PSLR ddPTM_KYSE-520_SHP099_60min_R1 1 SKLSPSPSLR 10 1 Q5T200-2;Q5T200;A0A087WX14 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.002)KLS(0.002)PS(0.981)PS(0.015)LR 80.87100000000001 0.023587999999999998 420210000.0 1837200.0 1687300.0 1557100.0 1490400.0 1565400.0 1658100.0 1503000.0 1603200.0 2016300.0 1759200.0 True False 1735286.8536325973 1606239.5753110668 1657473.1574480874 1632047.167894902 1688588.0740923705 1647751.182859033 1654937.9078664295 1597638.873389691 1650190.7467867006 1743614.856636889 0.995223714128959 0.9212123704940243 0.9505959135064075 0.9360135707049545 0.9684409763228016 0.9450201554471959 0.9491418942475055 0.9162796860260994 0.9464192969596587 1.0 20.733649970801956 SKMS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 2 SKMSLR 6 1 P25054-2;P25054-3;P25054;A0A2Q2SV78;E9PFT7;D6RFL6;E7EMH9 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.002)KMS(0.998)LR;SKMS(1)LR 81.594 0.014784 992040000.0 3255000.0 2783700.0 2545800.0 2399100.0 2776400.0 2851200.0 2666400.0 2753300.0 3196300.0 2630400.0 True False 3074438.661318366 2649966.8735811133 2709906.34142402 2627109.7426842856 2994886.884444911 2833404.603201063 2935945.7335562548 2743749.4449250503 2615932.4921660107 2607096.702420232 1.1792576234185288 1.0164436444268001 1.0394345322551126 1.0076763705180076 1.1487440729239864 1.0868045671534714 1.126136107966668 1.0524156784740513 1.0033891300378603 1.0 21.31401266562867 -7.643889605222122 3.6736203263875287 1.0009622196765222 1.081706867801425 0.2868133482997932 0.05256783432677673 0.3266725581074645 8.031116514429979 0.04304627351087513 0.013950830532329315 2.2704419098187524e-08 7.643889605222122 0.08074464812490278 SKPAGS(ph)DGERR ddPTM_KYSE-520_SHP099_60min_R1 9 SKPAGSDGERR 11 2 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.132)KPAGS(0.868)DGERR;S(0.015)KPAGS(0.985)DGERR;SKPAGS(1)DGERR;SKPAGS(1)DGERR;S(0.119)KPAGS(0.881)DGERR;S(0.001)KPAGS(0.999)DGERR;SKPAGS(1)DGERR;S(0.007)KPAGS(0.993)DGERR;S(0.025)KPAGS(0.975)DGERR 111.12 0.0002265 14962220000.0 8267420.0 7525240.0 5396310.0 7291480.0 8425940.0 9436030.0 6904350.0 6836620.0 8452220.0 16304750.0 True False 7808809.731906826 7163716.17478447 5744164.777001283 7984460.0669365935 9089013.540959425 9377136.236652391 7602309.077962475 6812905.3608991 6917509.911127062 16160302.599903533 0.4832093757918518 0.44329096751116737 0.355449085281087 0.4940786236876688 0.5624284251344205 0.5802574660147989 0.4704311092545913 0.4215827840339926 0.42805571667750547 1.0 23.94595087686145 -10.24019329637809 4.0776693730606635 1.0004096632021342 0.47187850355540906 0.864755900340559 0.06276286292675855 194567537.44656044 384763656.9619322 1051935.5622146712 0.01769547490248717 5.7518387673611286e-11 10.24019329637809 -0.5285311596467251 SKPAPSESAGYGIPLKDGDEKT(ph)DEEAEGPYS(ph)DNEMLTHK ddPTM_KYSE-520_SHP099_60min_R1 3 SKPAPSESAGYGIPLKDGDEKTDEEAEGPYSDNEMLTHK 39 3 Q6NUK4 Q6NUK4 REEP3 Receptor expression-enhancing protein 3 2 SKPAPSESAGYGIPLKDGDEKT(1)DEEAEGPYS(0.999)DNEMLT(0.001)HK;SKPAPSESAGYGIPLKDGDEKT(1)DEEAEGPYS(0.993)DNEMLT(0.007)HK;S(0.001)KPAPS(0.001)ES(0.002)AGY(0.001)GIPLKDGDEKT(0.994)DEEAEGPY(0.291)S(0.669)DNEMLT(0.042)HK 155.31 7.4951e-08 16018200000.0 2596580.0 2748398.0 2151835.0 3130730.0 2237590.0 2221640.0 2719350.0 3015310.0 3450650.0 2257218.0 True False 2452542.531246098 2616360.8346504993 2290545.727157735 3428273.637911707 2413675.6028544465 2207773.9206844866 2994248.4362984546 3004850.593388648 2824098.943807731 2237220.8046090333 1.0962451833960545 1.169469204497105 1.0238353417949821 1.5323805459205968 1.0788723213559823 0.9868377390984916 1.338378594607123 1.3431175801682937 1.262324638672068 1.0 21.093276220890612 -6.813688511648545 24.999833594579687 1.2645481693144995 1.157609671074073 0.050206642181029104 0.1671025921061177 277.41687675366006 132733.8312079064 0.06998133010482112 0.04718144677998928 1.5357180485463652e-07 6.813688511648545 -0.10693849824042645 SKPAPSESAGYGIPLKDGDEKT(ph)DEEAEGPYSDNEMLTHK ddPTM_KYSE-520_SHP099_60min_R1 1 SKPAPSESAGYGIPLKDGDEKTDEEAEGPYSDNEMLTHK 39 3 Q6NUK4 Q6NUK4 REEP3 Receptor expression-enhancing protein 3 1 SKPAPSESAGYGIPLKDGDEKT(1)DEEAEGPYSDNEMLTHK 123.59 3.2582e-05 301070000.0 138370.0 105660.0 111360.0 180010.0 120000.0 131080.0 124960.0 142240.0 183530.0 135870.0 True False 130694.34026624345 100583.9350011067 118538.44378229996 197118.0962780202 129443.3172933976 130261.88109834283 137592.1762920754 141746.60263906544 150205.5784148009 134666.29750526053 0.9705051871730421 0.7469124559333603 0.8802383816757823 1.4637522522687616 0.9612153871561004 0.967293847915098 1.0217268822342174 1.0525766673991193 1.1153910161444318 1.0 17.039029311830895 -5.031421782445442 24.998630709490964 1.0804873728493223 0.8474252215698046 0.3195073056211265 0.1452963615115142 713.9361459009622 567995.1337038457 0.03940295859269407 0.06834345649533723 9.302040318099121e-06 5.031421782445442 -0.23306215127951768 SKPDEKDPEKS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 1 SKPDEKDPEKSPTK 14 3 F8VWT9;J3KPF0;Q9Y4D8-4;Q9Y4D8;V9GYT9;A0A494C150 F8VWT9 HECTD4 Probable E3 ubiquitin-protein ligase HECTD4 1 SKPDEKDPEKS(0.909)PT(0.091)K 71.07300000000001 0.013255000000000001 2089800000.0 3792400.0 3410000.0 2903200.0 3357000.0 3564800.0 3379600.0 3028700.0 3610900.0 3947800.0 2933400.0 True False 3582028.012038033 3246178.481485645 3090344.9172842377 3676048.270681149 3845329.4790625344 3358506.662801031 3334870.55326351 3598374.6306903954 3230979.03593936 2907412.3581506656 1.232033014510702 1.11651808605177 1.0629193717983407 1.2643711375772626 1.3225951483223573 1.1551531909072903 1.1470235874572468 1.2376554088045613 1.1112902601798484 1.0 21.47130427267628 -8.02967540332135 5.055774450541775 1.000083190213615 1.1890718061229473 0.40932010196045565 0.07200844725536511 0.1970426605914052 18.39874320657456 0.07438698113674488 0.01938230826722481 9.339520865031318e-09 8.02967540332135 0.18898861590933236 SKPDPEVGPLLGVQPLPGS(ph)PTADR ddPTM_KYSE-520_SHP099_60min_R1 6 SKPDPEVGPLLGVQPLPGSPTADR 24 1 A0A6E1W9L1;Q9H5J0 A0A6E1W9L1 ZBTB3 Zinc finger and BTB domain-containing protein 3 1 SKPDPEVGPLLGVQPLPGS(0.687)PT(0.313)ADR;SKPDPEVGPLLGVQPLPGS(0.593)PT(0.407)ADR;SKPDPEVGPLLGVQPLPGS(0.971)PT(0.029)ADR;SKPDPEVGPLLGVQPLPGS(0.826)PT(0.174)ADR;SKPDPEVGPLLGVQPLPGS(0.965)PT(0.035)ADR;SKPDPEVGPLLGVQPLPGS(0.845)PT(0.155)ADR 149.0 4.4746e-07 5225103000.0 4932400.0 4854890.0 3882990.0 3242800.0 3652030.0 4708510.0 3960020.0 4538920.0 5739080.0 4791230.0 True False 4658789.939504366 4621653.797061544 4133293.748403668 3550994.7370166252 3939423.983791723 4679122.442556899 4360337.467670807 4523175.5459118895 4697007.742433471 4748783.429720529 0.9810491483665198 0.9732290102211574 0.8703900292725955 0.7477693581039144 0.8295648858477342 0.9853307719346279 0.9182009523494772 0.9524914355123756 0.9890970628470825 1.0 22.17912653230234 -6.272265273360001 24.875768452966295 0.9628783181547718 0.8776330933325134 0.3073699870005887 0.06613212269261817 1047.0572935324012 2405924.2643602043 0.026433608702547025 0.023539299738953797 5.342379394446237e-07 6.272265273360001 -0.08524522482225838 SKPGSTGPEPPIPQASPGPPGPLS(ph)QTPPMQRPVEPQEGPHK ddPTM_KYSE-520_SHP099_60min_R1 1 SKPGSTGPEPPIPQASPGPPGPLSQTPPMQRPVEPQEGPHK 41 2 Q8N4C8;Q8N4C8-4 Q8N4C8 MINK1 Misshapen-like kinase 1 1 SKPGSTGPEPPIPQAS(0.002)PGPPGPLS(0.499)QT(0.499)PPMQRPVEPQEGPHK 76.492 0.0039867 485830000.0 134460.0 161830.0 102980.0 98440.0 90815.0 110550.0 98014.0 107400.0 185760.0 144020.0 True False 127001.23576063543 154055.44388821794 109618.25557382577 107795.70800293465 97961.62383333265 109860.01644355973 107922.21164445781 107027.45446734835 152030.66662852612 142744.09484586449 0.8897127120934267 1.0792421504691139 0.7679354840716311 0.7551675473464089 0.6862744405582025 0.7696291504190552 0.7560537741403072 0.7497855135998229 1.06505748481357 1.0 17.123071538674303 -10.14052673672478 8.32258891202943 1.0000000121564219 0.8270783186217812 0.12452603656305061 0.12921206809534735 3.0657276183536565e-08 3.1815601596091776e-09 0.13162690627550805 0.03192421184444557 7.235578560942631e-11 10.14052673672478 -0.1729216935346407 SKPIPIMPAS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 14 SKPIPIMPASPQK 13 1 O00429-7;O00429-4;O00429-5;O00429-3;O00429-9;O00429-2;O00429;O00429-8;O00429-6 O00429-7 DNM1L Dynamin-1-like protein 1 SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;S(0.001)KPIPIMPAS(0.999)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK;SKPIPIMPAS(1)PQK 263.21 6.2993e-22 51045320000.0 54000240.0 45857340.0 40854880.0 39263050.0 40197190.0 48138720.0 41736300.0 50664580.0 52364840.0 49548090.0 True False 51004739.0403904 43654284.55312934 43488450.93491926 42994598.46713358 43360480.16227497 47838268.39232849 45955412.51103504 50488836.39718191 42856705.06619359 49109132.47043074 1.038599878975688 0.8889239609234425 0.8855471222405371 0.875490897604864 0.8829412775390176 0.9741216345276014 0.9357813954197909 1.0280946507776718 0.8726830002952746 1.0 25.549488001270067 -6.271172608630237 24.669023200811758 0.9622448823385954 0.9091372993351706 0.14053970556992879 0.05845365112463334 1078.5328984549824 2733551.3516930128 0.020052332625528517 0.017917355805320844 5.355837495559551e-07 6.271172608630237 -0.053107583003424774 SKPIPIMPAS(ph)PQKGHAVNLLDVPVPVAR ddPTM_KYSE-520_SHP099_60min_R1 6 SKPIPIMPASPQKGHAVNLLDVPVPVAR 28 2 O00429-7;O00429-4;O00429-5;O00429-3;O00429-9;O00429-2;O00429;O00429-8;O00429-6 O00429-7 DNM1L Dynamin-1-like protein 1 S(0.001)KPIPIMPAS(0.999)PQKGHAVNLLDVPVPVAR;SKPIPIMPAS(1)PQKGHAVNLLDVPVPVAR;SKPIPIMPAS(1)PQKGHAVNLLDVPVPVAR;S(0.01)KPIPIMPAS(0.99)PQKGHAVNLLDVPVPVAR;S(0.012)KPIPIMPAS(0.988)PQKGHAVNLLDVPVPVAR;SKPIPIMPAS(1)PQKGHAVNLLDVPVPVAR 219.81 1.2147e-22 77947590000.0 18433730.0 23923090.0 21853370.0 13235280.0 16711700.0 20865260.0 10835531.0 14162250.0 26487840.0 12199660.0 True False 17411174.25017029 22773788.847109817 23262073.196828276 14493157.031867964 18026815.713433936 20735032.17276481 11930892.218071753 14113124.460243994 21678315.960108455 12091580.50359186 1.4399419699515892 1.8834418577740732 1.9238240352382527 1.1986156009599163 1.4908568576356902 1.714832247662361 0.9867107293812936 1.1671860809305803 1.7928438679847363 1.0 23.527499497356462 -5.262232505033275 24.999866052895594 1.3505300837573726 1.7625065499123518 0.3070192052877968 0.2836678890208225 88.91301721757372 2802638.48406175 0.07875777580803887 0.12504688224166444 5.46723189369884e-06 5.262232505033275 0.4119764661549792 SKPKS(ph)DRGSHS(ph)HS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SKPKSDRGSHSHSR 14 3 Q13247;Q13247-3;A0A590UJP7 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 3 S(0.159)KPKS(0.871)DRGS(0.132)HS(0.846)HS(0.992)R 48.354 0.052637 287500000.0 182170.0 145860.0 140930.0 217190.0 134790.0 170070.0 156450.0 146680.0 199230.0 128180.0 True False 172064.6669531082 138852.66665967632 150014.57329597275 237831.6722994455 145397.20614980903 169008.53004573676 172265.4928048588 146171.2013153692 163054.8541795934 127044.42492253084 1.354366136554436 1.0929457687288986 1.180804064306235 1.8720354902977483 1.1444595560841757 1.3303104811470066 1.3559468895223294 1.1505518750980335 1.2834475363954065 1.0 16.954973541578628 -8.293343336452727 0.7402479989441104 1.0010892663217301 1.3320728617192548 0.17882830678888184 0.20715422880543263 2.030287886300445 2.2137761105791283 0.2151136777173998 0.07767043855557128 5.089283728524977e-09 8.293343336452727 0.33098359539752464 SKPLAAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SKPLAASPK 9 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SKPLAAS(1)PK;SKPLAAS(1)PK 122.33 0.0011287 4066700000.0 2161800.0 1667870.0 1594460.0 1833230.0 2133200.0 1967150.0 1849560.0 2148590.0 2141200.0 1984110.0 True False 2041880.6445585424 1587743.0216760915 1697241.4428261993 2007459.6280193024 2301070.7037523016 1954872.2871727555 2036531.5747660894 2141137.0427746736 1752412.0552594776 1966532.3290142205 1.0383153200344752 0.8073821102508862 0.8630630769629856 1.020811912624695 1.1701158784944958 0.9940707601551051 1.0355952682389706 1.0887881227195377 0.8911178470876822 1.0 20.9072224731362 -5.312092930078179 6.634856981863046 1.0376452208710623 0.8935010540627325 0.303416323924267 0.08629760662094428 0.24055448847536182 25.50923625668349 0.023912269207176713 0.03594461382792855 4.874241802038805e-06 5.312092930078179 -0.14414416680832975 SKPLAAS(ph)PKPAGLK ddPTM_KYSE-520_SHP099_60min_R1 2 SKPLAASPKPAGLK 14 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SKPLAAS(1)PKPAGLK;SKPLAAS(1)PKPAGLK 147.64 4.921e-05 3401800000.0 1705170.0 1512300.0 1521970.0 1203770.0 1355280.0 1462290.0 1331480.0 1537510.0 1746160.0 1375550.0 True False 1610580.8209278788 1439646.8379914202 1620078.6214380993 1318175.9388733527 1461932.8255116334 1453163.3057010658 1466078.9923925458 1532176.73666753 1429101.3611114733 1363363.6971617048 1.1813288151069585 1.055952157878726 1.18829526179319 0.96685568320293 1.0722984839299543 1.0658662165688502 1.0753396143997944 1.1238209876478784 1.048217261532358 1.0 20.378739042765254 -1.0000001679081765 0.8118871184116713 1.0641696447514546 30.72568396381642 0.26981836037654994 0.057282568600900884 786.9808208667583 2.5790505207063608 0.019497310468642913 42982.929294491005 0.09999996133772106 1.0000001679081765 29.661514319064963 SKPNLPS(ph)ESR ddPTM_KYSE-520_SHP099_60min_R1 5 SKPNLPSESR 10 1 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 SKPNLPS(0.975)ES(0.025)R;SKPNLPS(1)ESR;SKPNLPS(0.995)ES(0.005)R;SKPNLPS(0.969)ES(0.031)R;SKPNLPS(0.971)ES(0.029)R 161.33 0.00011514 5117180000.0 5274630.0 4387190.0 4226850.0 4350460.0 4583470.0 4819810.0 4660400.0 5113600.0 5165260.0 4391640.0 True False 4982035.759185782 4176422.807093555 4499319.514199117 4763926.410386507 4944163.012623076 4789727.777972264 5131518.713120894 5095862.115123214 4227378.989608426 4352733.486244223 1.1445763391970398 0.9594942626954175 1.0336767753914051 1.094467746633641 1.1358754282218118 1.1003953706582443 1.178918656365669 1.1707268848937047 0.9712009712903511 1.0 22.053490257300947 -5.3174101356142565 4.888822741786943 1.1065217409554946 1.0371882440638636 0.05377330924569723 0.07586578506320174 0.40864719939090827 21.02182738214035 0.021049676165558914 0.032342943373625636 4.814928743888044e-06 5.3174101356142565 -0.06933349689163104 SKPNLPS(ph)ESRS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 SKPNLPSESRSR 12 2 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 2 SKPNLPS(0.9)ES(0.155)RS(0.944)R;SKPNLPS(0.997)ES(0.011)RS(0.991)R;S(0.096)KPNLPS(0.904)ES(0.317)RS(0.683)R;SKPNLPS(0.795)ES(0.206)RS(1)R 81.52600000000001 0.0064451000000000005 5804500000.0 9387840.0 8463500.0 7606520.0 8000660.0 7935750.0 8062460.0 7742610.0 8170930.0 9618190.0 7671240.0 True False 8867077.801004924 8056900.756027511 8096848.450062306 8761040.320913864 8560248.376759006 8012139.196522313 8525308.579391683 8142586.950939406 7871769.150838853 7603278.781734414 1.1662176352531715 1.059661362856094 1.0649153717095852 1.1522713519279044 1.1258627524382703 1.0537742237954126 1.121267393203086 1.070931000254862 1.0353124456976956 1.0 22.85819025920616 -7.791248702702382 1.5488752214035584 1.0001511898498785 1.1042473588734512 0.494981095420154 0.03624932775383686 0.3199987440414658 1.564382300285251 0.03424098229625202 0.01034779848629888 1.6171536945929194e-08 7.791248702702382 0.10409616902357266 SKPNLPSES(ph)R ddPTM_KYSE-520_SHP099_60min_R1 6 SKPNLPSESR 10 1 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 1 SKPNLPS(0.004)ES(0.996)R;SKPNLPS(0.16)ES(0.84)R;SKPNLPS(0.011)ES(0.989)R;SKPNLPS(0.001)ES(0.999)R;SKPNLPS(0.396)ES(0.604)R;SKPNLPS(0.002)ES(0.998)R 140.01 0.00038355 13984640000.0 15604260.0 13036960.0 12450960.0 14195450.0 13899660.0 14446490.0 14359760.0 15558080.0 13925670.0 13386380.0 True False 14738660.591478873 12410644.872724105 13253568.803840382 15544581.299982348 14993484.16375291 14356324.097256642 15811384.678552251 15504112.651763178 11397119.365573142 13267787.087646037 1.1108604995027695 0.9353967463255392 0.9989283605689683 1.1716031616497893 1.1300666844219796 1.0820435994653674 1.1917122707881422 1.168553018626553 0.859006802738437 1.0 23.661424430254616 -3.9449993012018605 21.28339380327035 1.0706204816551945 1.7069690260466803 0.01139049109772039 0.10550292123189815 11161.13011739035 1386775.2338931519 0.02603105672334232 430743.0454838493 0.00011350126419540604 3.9449993012018605 0.6363485443914858 SKPNLPSES(ph)RS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SKPNLPSESRSR 12 2 Q08170 Q08170 SRSF4 Serine/arginine-rich splicing factor 4 2 SKPNLPS(0.423)ES(0.579)RS(0.998)R 60.062 0.030224 2555800000.0 4143100.0 3566300.0 3172400.0 3943200.0 3517800.0 3671500.0 3559400.0 4091900.0 4125500.0 3448100.0 True False 3913273.983934908 3394969.594874566 3376897.980019471 4317960.542433689 3794630.846455953 3648584.80662623 3919218.8883963884 4077706.153956644 3376413.195391821 3417552.516581203 1.1450516019720474 0.9933920776353634 0.9881041955128751 1.2634657467541193 1.1103357821263171 1.0676016795423362 1.146791122998465 1.193165616087104 0.9879623441074328 1.0 21.704532076820215 SKPPPTYES(ph)EEEDK ddPTM_KYSE-520_SHP099_60min_R1 4 SKPPPTYESEEEDK 14 1 O60885;O60885-2;O60885-3 O60885 BRD4 Bromodomain-containing protein 4 1 SKPPPT(0.001)Y(0.005)ES(0.994)EEEDK;SKPPPT(0.119)YES(0.881)EEEDK;SKPPPTYES(1)EEEDK;SKPPPT(0.002)YES(0.998)EEEDK 201.04 5.6259e-11 2433030000.0 3989070.0 3156868.0 2972491.0 3502870.0 3225394.0 3705250.0 3730720.0 3704530.0 4019040.0 3269320.0 True False 3767788.335086107 3005207.3227245267 3164102.5260137618 3835781.7116237357 3479214.157818513 3682124.1603573 4107857.585918463 3691679.850073798 3289283.647753619 3240356.36829247 1.1627697409935103 0.9274311159510344 0.976467451844227 1.1837530430781074 1.0737134322210093 1.1363330886650664 1.2677178430479636 1.139282051257577 1.0150993513984796 1.0 21.62772105604385 -5.255366988423497 24.857272564732682 1.127697618794755 1.0127436021481333 0.16954734730416166 0.0927135462728982 674.7861748365176 2762221.858034241 0.025268446756047128 0.04228583672730471 5.554347043216425e-06 5.255366988423497 -0.11495401664662164 SKPPPTYES(ph)EEEDKCKPMSYEEK ddPTM_KYSE-520_SHP099_60min_R1 9 SKPPPTYESEEEDKCKPMSYEEK 23 3 O60885;O60885-2;O60885-3 O60885 BRD4 Bromodomain-containing protein 4 1 SKPPPT(0.002)YES(0.997)EEEDKCKPMSYEEK;SKPPPT(0.001)YES(0.999)EEEDKCKPMSYEEK;SKPPPTYES(1)EEEDKCKPMSYEEK;SKPPPT(0.002)YES(0.998)EEEDKCKPMSYEEK;SKPPPT(0.004)YES(0.996)EEEDKCKPMSYEEK;SKPPPT(0.003)YES(0.997)EEEDKCKPMSYEEK;S(0.011)KPPPT(0.071)YES(0.918)EEEDKCKPMSYEEK;S(0.001)KPPPT(0.043)YES(0.956)EEEDKCKPMSYEEK;S(0.001)KPPPT(0.172)YES(0.827)EEEDKCKPMSYEEK 234.48 2.2725e-28 76297330000.0 9881620.0 8387240.0 7462060.0 8981320.0 8013830.0 7648340.0 8476390.0 9000510.0 9820990.0 7720470.0 True False 9333466.840078907 7984304.400896106 7943076.327318144 9834901.952467684 8644472.828544568 7600603.873052333 9333266.222794373 8969289.331544835 8037745.783010817 7652072.642234761 1.2197305588245304 1.043417224874164 1.0380293939549423 1.2852598782433193 1.1296903770662559 0.9932738786484654 1.2197043414460613 1.1721385500236685 1.0504011342818906 1.0 22.86741913878635 -7.949545559295664 4.868695151819342 1.0006005391852568 1.1334035363720467 0.2177761972228066 0.08740433638052024 0.27386501359136745 13.343288221850603 0.0849919128050226 0.022187874044480388 1.1231931358669367e-08 7.949545559295664 0.1328029971867899 SKPS(ph)PQKDQALGDGIAPPQK ddPTM_KYSE-520_SHP099_60min_R1 2 SKPSPQKDQALGDGIAPPQK 20 2 Q9H9J4-2;Q9H9J4;B4DP25;E5RJP3 Q9H9J4-2 USP42 Ubiquitin carboxyl-terminal hydrolase 42 1 S(0.019)KPS(0.981)PQKDQALGDGIAPPQK;S(0.015)KPS(0.985)PQKDQALGDGIAPPQK 140.66 1.7397999999999998e-06 1306000000.0 1499000.0 1548690.0 1289590.0 993600.0 1073410.0 1335680.0 1097410.0 1254220.0 1531370.0 1353880.0 True False 1415847.4818175838 1474288.607768916 1372719.0348169557 1088031.4452632666 1157881.2601325507 1327343.525674661 1208346.9124894885 1249869.4035571474 1253311.8106962012 1341885.6765027016 1.0551178141402073 1.098669308112216 1.0229776342755321 0.810822758089911 0.8628762348446005 0.9891628988350623 0.9004842466451767 0.9314276360819558 0.9339929866176478 1.0 20.35583033403047 -5.041499019734982 7.8140936290277185 0.9153213651904126 1.0732291730552017 0.6064578751695839 0.05301282656253267 0.1690483854726003 28.994601316056958 0.014559493116915016 0.02581848779388122 9.088683505096702e-06 5.041499019734982 0.15790780786478908 SKPYEGSQRNS(ph)TELAPPLPVR ddPTM_KYSE-520_SHP099_60min_R1 3 SKPYEGSQRNSTELAPPLPVR 21 2 Q9H7D0 Q9H7D0 DOCK5 Dedicator of cytokinesis protein 5 1 SKPYEGSQRNS(0.951)T(0.049)ELAPPLPVR;SKPYEGSQRNS(0.963)T(0.037)ELAPPLPVR;SKPYEGSQRNS(0.96)T(0.04)ELAPPLPVR 210.91 4.3626e-19 3291720000.0 1041770.0 1082830.0 1063930.0 873740.0 913300.0 828160.0 729980.0 880150.0 1279300.0 872380.0 True False 983980.9413829917 1030809.2214390326 1132512.630148189 956779.9869004897 985171.514033835 822991.1462496467 803773.5023182541 877096.9650785547 1047011.3685286043 864651.3919013705 1.138008856053785 1.192167422725453 1.3097910218565554 1.1065499875001972 1.1393857955487015 0.9518184484036822 0.9295925616342955 1.014393746767488 1.2109057804512682 1.0 19.721759062044452 -5.853816228855392 2.0811984438818345 1.0193970067547624 1.2050489366843118 0.4489437439038897 0.08662264542271207 0.2925902575730829 2.597956962938457 0.03135064746055472 0.03797591402642502 1.4001796814451427e-06 5.853816228855392 0.18565192992954938 SKQHRVS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 SKQHRVSR 8 2 Q9NTI5-2;Q9NTI5;A9IYQ1;Q9NTI5-5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 S(0.001)KQHRVS(0.999)R;SKQHRVS(1)R 57.55 0.027919 3783400000.0 3023800.0 2269100.0 2268200.0 1022790.0 3902100.0 2853200.0 1498030.0 1960540.0 1960320.0 2661000.0 True False 2856063.7862041406 2160089.0300114634 2414411.801248317 1119995.6540869728 4209173.070088062 2835392.120459199 1649465.491763903 1953739.3443334738 1604375.3036457386 2637425.610226672 1.0828983290105678 0.819014201437824 0.9154426164235251 0.4246548792671788 1.5959400158119748 1.0750605095608792 0.6254073993094125 0.7407751470819913 0.6083111111929528 1.0 21.33069897185657 -6.761635965269673 24.999999484545693 0.7220213320679425 0.9770037952966173 0.14154461109416738 0.2894199114929667 10.872587589979826 1382310.7227754218 0.11870320467931539 0.08577308942454717 1.7312669353823304e-07 6.761635965269673 0.2549824632286748 SKQPPPAS(ph)SPTK ddPTM_KYSE-520_SHP099_60min_R1 1 SKQPPPASSPTK 12 1 A0A0J9YWL0;Q9Y4K1;A0A494C1M5 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 SKQPPPAS(0.808)S(0.189)PT(0.002)K 62.055 0.022938 2758800000.0 1067500.0 1047000.0 962590.0 856210.0 916140.0 980110.0 796160.0 980960.0 1188300.0 1074600.0 True False 1008283.646991509 996700.5484209605 1024640.0915984563 937583.9409710764 988235.0058764442 973992.7699366541 876643.6225728114 977557.2787177842 972534.6746052846 1065079.88002615 0.9466742034097513 0.9357988702185318 0.9620312155115531 0.8802944817134811 0.9278506001373164 0.9144786116068031 0.8230778169908608 0.9178253171900901 0.9131096106908025 1.0 20.022530204654107 -5.253603218613648 24.87907963853574 0.9047142356543563 0.9469311745334954 0.1303398638605684 0.04191089334566226 992.219243067401 3150197.513515238 0.011119296835239562 0.018781915965474235 5.576950392089174e-06 5.253603218613648 0.04221693887913913 SKQPPPASS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 1 SKQPPPASSPTK 12 1 A0A0J9YWL0;Q9Y4K1;A0A494C1M5 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 SKQPPPAS(0.058)S(0.864)PT(0.078)K 49.343 0.052173000000000004 610110000.0 1262800.0 1186400.0 1100300.0 976180.0 1065300.0 1155300.0 1119400.0 1191600.0 1448800.0 1196200.0 True False 1192749.9666706114 1129403.5631772948 1171227.0985422458 1068955.8537007803 1149133.0492721375 1148089.3441632255 1232559.8762912045 1187466.6177215294 1185734.4412758877 1185602.5986295165 1.0060284686026808 0.9525987582034786 0.9878749421569353 0.9016139598010559 0.969239651296703 0.9683593351518848 1.0396062539977289 1.0015722123873274 1.0001112030679786 1.0 20.177189084214337 -6.634423891591567 7.309829818510007 1.0102941218734238 0.961597103715243 0.4022450735392439 0.027482909694913904 0.22625174904690742 13.70918388664014 0.010513074033870836 0.008112217778629865 2.3204708033671178e-07 6.634423891591567 -0.04869701815818084 SKQPPPASS(ph)PTKR ddPTM_KYSE-520_SHP099_60min_R1 2 SKQPPPASSPTKR 13 2 A0A0J9YWL0;Q9Y4K1;A0A494C1M5 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 SKQPPPAS(0.171)S(0.808)PT(0.02)KR;SKQPPPAS(0.145)S(0.847)PT(0.008)KR 98.81700000000001 0.0011963 5117300000.0 816390.0 704110.0 660840.0 656070.0 677610.0 712810.0 616020.0 661270.0 876180.0 671970.0 True False 771103.2192668831 670283.4987093426 703438.8037813848 718422.6955453613 730934.0519264928 708361.0883865561 678293.3133758338 658976.2087115787 717087.7987003775 666016.8685847489 1.157783316968288 1.0064061892811513 1.0561876687540295 1.0786854349079356 1.09747077950096 1.0635782992881042 1.0184326334213902 0.989428706380769 1.0766811360561357 1.0 19.345199192146822 -6.699810085358732 4.624788983691054 1.0200990827188645 1.074387330829344 0.30454805541445784 0.041273184321177644 0.27701852479969596 11.763481200334759 0.016100089797281007 0.012011792912867433 1.9961350232499574e-07 6.699810085358732 0.05428824811047939 SKRPPKS(ph)PEEEGQMS(ph)S ddPTM_KYSE-520_SHP099_60min_R1 2 SKRPPKSPEEEGQMSS 16 3 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 2 S(0.01)KRPPKS(0.99)PEEEGQMS(0.544)S(0.456);S(0.034)KRPPKS(0.966)PEEEGQMS(0.527)S(0.473) 77.575 0.017905 803930000.0 1551650.0 1537450.0 1554370.0 1384700.0 1408930.0 1551930.0 1311090.0 1339800.0 1752360.0 1400370.0 True False 1465576.8813624117 1463588.5942405 1654567.1772799324 1516301.4716747645 1519804.7752848912 1542243.8292107948 1443627.7722053211 1335152.5465116722 1434175.597400755 1387963.8112713746 1.0559186554150455 1.0544861345483159 1.1920823611131108 1.092464702149426 1.0949887619135763 1.111155648790367 1.040104763886429 0.9619505463104782 1.0332946621187842 1.0 20.404538521981017 -6.935150853280315 3.882002421262355 0.9980752453374819 1.1014722409705873 0.5796109246409646 0.03921336738715983 0.1615716435994447 4.897195559505474 0.018256268746093856 0.011633638615649356 1.1610452518023477e-07 6.935150853280315 0.10339699563310534 SKRPPKS(ph)PEEEGQMSS(ph) ddPTM_KYSE-520_SHP099_60min_R1 2 SKRPPKSPEEEGQMSS 16 3 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 2 S(0.004)KRPPKS(0.996)PEEEGQMS(0.269)S(0.731);S(0.005)KRPPKS(0.995)PEEEGQMS(0.187)S(0.813) 117.22 0.00026277 1135880000.0 1861590.0 1947910.0 1637470.0 1569120.0 1605650.0 1569730.0 1603290.0 1589330.0 2142080.0 1649180.0 True False 1758323.8917123375 1854329.4797274831 1743023.9362446328 1718248.6930268675 1732005.5201012015 1559932.7328082197 1765366.199802506 1583816.9851824113 1753132.2694424693 1634569.548242626 1.075710662542786 1.1344451398358226 1.0663504273150135 1.0511933829149132 1.0596095601825763 0.9543385501616309 1.0800190188912446 0.9689505025254017 1.0725345222094183 1.0 20.64047933203359 -5.394189881172115 1.3107466100922542 1.0185629320553986 1.1042794548367847 0.38060726212431073 0.04138114894699458 0.447635902438859 1.5217339942489128 0.013701127222122932 0.02902564022047155 4.0346895068990056e-06 5.394189881172115 0.08571652278138608 SKS(ph)AT(ph)TTPSGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSATTTPSGSPR 13 1 A0A096LP25;A0A096LNZ0;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LP25;Q2M2I8 AAK1 AP2-associated protein kinase 1 3 S(0.007)KS(0.992)AT(0.446)T(0.446)T(0.109)PS(0.001)GS(0.999)PR;S(0.006)KS(0.896)AT(0.493)T(0.505)T(0.091)PS(0.015)GS(0.994)PR 171.29 3.3306e-07 324100000.0 1034200.0 996880.0 900200.0 943680.0 869280.0 754070.0 745440.0 892440.0 988540.0 763310.0 True False 976830.8643734119 948988.3884526128 958228.3323709248 1033367.0634722618 937687.3904733723 749363.5694219351 820796.3499933153 889344.3339370618 809046.0550654782 756547.667246194 1.2911689595568256 1.2543669480958102 1.2665802484843303 1.3658981558077898 1.239429359271598 0.9905041041889552 1.0849235091570426 1.17552980788936 1.069392042421301 1.0 19.52907145857506 -6.103950021885202 5.4322854071031985 1.0773796219578125 1.291152479370548 0.7964003091327035 0.05575637220071361 0.10948195501259902 4.69701752486327 0.0190481543743598 0.01916947421761471 7.87136367240685e-07 6.103950021885202 0.21377285741273555 SKS(ph)ATLLYDQPLQVFTGS(ph)SSSSDLISGTK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSATLLYDQPLQVFTGSSSSSDLISGTK 29 1 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 2 S(0.154)KS(0.629)AT(0.216)LLYDQPLQVFT(0.049)GS(0.528)S(0.229)S(0.141)S(0.041)S(0.012)DLISGTK 134.48 1.8094e-06 239840000.0 231830.0 249330.0 160390.0 225820.0 205040.0 206980.0 199340.0 246640.0 330590.0 200820.0 True False 218969.92775835277 237351.81254804033 170728.99603307358 247281.86490474144 221175.48148198574 205688.1610446674 219491.23257092072 245784.46340620884 270563.1894957173 199040.89103559585 1.1001253391655732 1.1924776427251478 0.8577583990143057 1.2423671518859827 1.1112062467728372 1.033396504479488 1.1027444231631158 1.2348440671030432 1.3593346979507372 1.0 17.602705323467312 -7.234169877780332 6.70347356165714 1.2229735154671846 1.090343337013848 0.12106988470697244 0.1264845250836888 0.3126119439497645 54.48661222644731 0.05935031872843786 0.03296189942123192 5.832169296566903e-08 7.234169877780332 -0.13263017845333658 SKS(ph)ATLLYDQPLQVFTGSSSSSDLISGTK ddPTM_KYSE-520_SHP099_60min_R1 2 SKSATLLYDQPLQVFTGSSSSSDLISGTK 29 1 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 S(0.135)KS(0.578)AT(0.287)LLYDQPLQVFTGSSSSSDLISGTK;S(0.168)KS(0.663)AT(0.168)LLYDQPLQVFTGSSSSSDLISGTK 207.53 1.7722000000000002e-17 1553200000.0 1119520.0 1150200.0 676470.0 740310.0 691640.0 1114780.0 812360.0 1180300.0 1476190.0 829220.0 True False 1057417.9938922094 1094942.665514603 720076.3385902689 810668.8398176819 746068.1331067132 1107822.2445133566 894481.2766695775 1176205.8147840921 1208151.1077215972 821873.755923398 1.2865941834390013 1.332251647680859 0.8761398370498437 0.9863666213637312 0.9077648820511186 1.3479226420469985 1.0883438852048548 1.4311271120496996 1.4699959683761965 1.0 19.64855727991223 -7.2501417580868015 24.313924219264358 1.3379211552291177 1.1125614017079855 0.1442071568992318 0.19713354377186945 799.2245597491861 1720038.132234155 0.09656519341636578 0.055062957991997306 5.621578012797246e-08 7.2501417580868015 -0.22535975352113224 SKS(ph)ATT(ph)TPSGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 SKSATTTPSGSPR 13 1 A0A096LP25;A0A096LNZ0;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LP25;Q2M2I8 AAK1 AP2-associated protein kinase 1 3 SKS(0.977)AT(0.062)T(0.843)T(0.112)PS(0.006)GS(0.999)PR;SKS(0.765)AT(0.402)T(0.703)T(0.128)PS(0.002)GS(1)PR;SKS(0.95)AT(0.144)T(0.768)T(0.137)PS(0.011)GS(0.99)PR 206.61 5.2888e-09 1632180000.0 3496010.0 3263780.0 2978960.0 3261290.0 2840110.0 2750930.0 2576320.0 2894970.0 3308530.0 2478810.0 True False 3302079.356176843 3106983.1097663403 3170988.5281045237 3571242.021057411 3063610.4989845976 2733760.4254643316 2836759.568060176 2884928.0247610793 2707784.3532540784 2456849.671885 1.3440298745032073 1.264620764274328 1.2906725895327595 1.453585891690883 1.2469670139134172 1.1127096853943341 1.1546329433675495 1.1742387244017414 1.1021367665432091 1.0 21.228378155041767 -6.091303493625788 3.967542393585885 1.1234687228391627 1.3317957967962673 0.7371473225594982 0.064344402302578 0.13166230620765393 3.7577467309465393 0.021750480204352454 0.022171126921330556 8.103945400996511e-07 6.091303493625788 0.2083270739571046 SKS(ph)ATTT(ph)PS(ph)GSPR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSATTTPSGSPR 13 1 A0A096LP25;A0A096LNZ0;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LP25;Q2M2I8 AAK1 AP2-associated protein kinase 1 3 S(0.003)KS(0.995)AT(0.181)T(0.181)T(0.639)PS(0.545)GS(0.457)PR 141.1 0.00054892 283760000.0 596130.0 580310.0 506150.0 585230.0 497320.0 451060.0 445670.0 461390.0 587780.0 429530.0 True False 563061.4805443068 552431.0365369316 538777.2388686341 640850.0832441847 536456.2546362706 448244.76722778793 490722.6729200475 459789.54577923595 481053.96872800984 425724.6983692835 1.3225952891647694 1.297625058289994 1.265553163658093 1.5053157256295626 1.2601013206213747 1.0528981967566513 1.152676071648498 1.0800161408075126 1.1299649058902672 1.0 18.699561264770818 -6.1072587089782004 4.50709007009415 1.093797729641336 1.342945996968804 0.7544741349048514 0.07153519205413167 0.11815189060796363 3.918793601210383 0.023872877714040487 0.024117617141885008 7.811623280013187e-07 6.1072587089782004 0.2491482673274681 SKS(ph)ATTTPSGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSATTTPSGSPR 13 1 A0A096LP25;A0A096LNZ0;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LP25;Q2M2I8 AAK1 AP2-associated protein kinase 1 2 S(0.004)KS(0.918)AT(0.049)T(0.035)T(0.002)PS(0.137)GS(0.853)PR 122.46 0.000285 375000000.0 466510.0 463960.0 408930.0 418980.0 365930.0 370030.0 383110.0 410610.0 462800.0 382800.0 True False 440631.76033537055 441670.6651818418 435290.28211113374 458799.73322907015 394726.60914310836 367720.5055143407 421838.49759328563 409185.689747094 378767.18623859785 379408.6898138935 1.1613644393635476 1.164102660375251 1.1472860105672622 1.2092494071607038 1.040373137833845 0.9691936831882104 1.1118314074466893 1.0784826513799846 0.9983092016800924 1.0 18.533393196433014 -5.77347689495399 24.99084503985089 1.0377038682146014 1.1683854402516705 0.7265401784715202 0.0412489803554876 124.16971187276256 257785.50632075733 0.01308583839295294 0.014949679432773791 1.6847020527873887e-06 5.77347689495399 0.1306815720370691 SKS(ph)DATASISLSSNLK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSDATASISLSSNLK 16 1 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.006)KS(0.991)DAT(0.003)ASISLSSNLK 150.68 1.1370999999999998e-05 802650000.0 826020.0 806090.0 653420.0 676460.0 647040.0 735060.0 827180.0 779670.0 855210.0 780470.0 True False 780199.0239699527 767364.2264342416 695540.4987089643 740750.5550148843 697958.3668460001 730472.2178833367 910799.4268988376 776965.5067463452 699925.4220896958 773555.6429964716 1.008588110026251 0.9919961587530449 0.8991473399569485 0.9575918186641205 0.9022729950522559 0.9443046851209753 1.1774194075693556 1.0044080393967072 0.9048158699721209 1.0 19.56114554502233 SKS(ph)DATASISLSSNLKR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSDATASISLSSNLKR 17 2 Q9UBF8-2;A0A0B4J1S8;Q9UBF8 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 S(0.058)KS(0.825)DAT(0.111)AS(0.006)ISLSSNLKR 99.603 0.00038145 0.0 1090800.0 1237300.0 1261000.0 851370.0 964310.0 866130.0 727780.0 832930.0 1259000.0 801230.0 True False 1030291.1495441104 1177858.2507748376 1342286.0776713367 932283.9488262761 1040195.7108266358 860724.16139539 801351.1048483246 830040.7602373239 1030397.3368072486 794131.7255475065 1.2973806692256076 1.4832026134741998 1.690256206230661 1.1739663821937374 1.3098528586167275 1.0838556548058473 1.0090909090627764 1.0452179827786887 1.297514384149369 1.0 19.599018806782343 -5.707187495354519 1.6169419336046074 1.09322445053221 1.4783803876551878 0.566905750297532 0.1397510354273903 0.27008094644024355 1.4613275114646802 0.050223160891834574 0.07102350104469961 1.9625128300122833e-06 5.707187495354519 0.3851559371229778 SKS(ph)DGEAKPEPSPSPR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSDGEAKPEPSPSPR 16 2 K7ENQ6;K7ERQ1;P26358;K7EJL0 K7ENQ6;P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 S(0.183)KS(0.817)DGEAKPEPSPSPR 60.602 0.038105 0.0 135970.0 127450.0 136140.0 113990.0 129350.0 156470.0 138480.0 173800.0 157440.0 124300.0 True False 128427.47305052498 121327.11069364983 144915.80223170153 124823.5753276568 139529.10909917473 155493.41269040035 152478.9098345596 173197.12836522484 128852.86473942269 123198.7987039368 1.0424409523598797 0.9848075790512788 1.1762760981132097 1.0131882505415053 1.1325525132309273 1.2621341630454679 1.2376655571211115 1.4058345551034204 1.0458938406459088 1.0 16.910628662999475 -6.016458266061441 4.621066108119677 1.217692626036611 1.0584979320001853 0.21433335882121296 0.11680375307402209 0.25198143246554744 13.851312151022313 0.036879654078778384 0.03917543032882951 9.628125309077695e-07 6.016458266061441 -0.15919469403642572 SKS(ph)DLSER ddPTM_KYSE-520_SHP099_60min_R1 4 SKSDLSER 8 1 Q9BQ89;V9GZ26 Q9BQ89 FAM110A Protein FAM110A 1 S(0.002)KS(0.996)DLS(0.002)ER;S(0.003)KS(0.997)DLSER;S(0.005)KS(0.98)DLS(0.015)ER;S(0.081)KS(0.919)DLSER 154.85 0.00020897 6167130000.0 8120260.0 7284520.0 6771090.0 6577810.0 7340630.0 6768790.0 7130960.0 7099570.0 8271040.0 6879140.0 True False 7669812.990463012 6934560.724912563 7207565.295527059 7202963.084709304 7918295.8185286205 6726543.470854834 7851827.028262938 7074943.248722094 6769227.631950937 6818196.171489943 1.1249035371751368 1.0170667652405185 1.057107351305797 1.056432361806815 1.1613476085711214 0.9865576322050762 1.1515988731880564 1.0376561587221163 0.9928179626535585 1.0 22.700958678271707 -7.5197530031671755 12.672034761736409 1.0026496492644665 1.0761719113709634 0.2846840114730723 0.05263063269760199 0.3209663809475161 1297.0653946725104 0.031205828502367125 0.012816705067090301 3.0216697497464e-08 7.5197530031671755 0.07352226210649682 SKS(ph)DNQISDR ddPTM_KYSE-520_SHP099_60min_R1 3 SKSDNQISDR 10 1 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1;C9J8U1;C9JLY8 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 S(0.109)KS(0.888)DNQIS(0.003)DR;S(0.003)KS(0.997)DNQISDR;S(0.15)KS(0.85)DNQISDR 109.1 0.0016355999999999999 0.0 2567570.0 2273170.0 2237230.0 2303850.0 2369420.0 2439190.0 2211400.0 2387240.0 2741690.0 2358300.0 True False 2425141.7737761 2163963.501102266 2381445.425494565 2522807.2113222405 2555879.873844355 2423966.1104384116 2434949.8931841804 2378959.221626003 2243868.2083805134 2337407.2967296373 1.0375349547206496 0.9257965028730578 1.018840588384636 1.0793186171926492 1.093467910971439 1.0370319771953662 1.0417311080490845 1.0177769295725663 0.9599816906193464 1.0 21.15647771712635 -4.986880846675714 24.761352297709138 1.0375419967247972 0.9793289063469345 0.1704399368395545 0.043543226161408856 306.3846174367798 578267.2378630324 0.011659930216003884 0.024253435631212353 1.0306688566502833e-05 4.986880846675714 -0.05821309037786271 SKS(ph)DSYTLDPDTLR ddPTM_KYSE-520_SHP099_60min_R1 9 SKSDSYTLDPDTLR 14 1 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 S(0.02)KS(0.975)DS(0.004)YTLDPDTLR;S(0.362)KS(0.486)DS(0.069)Y(0.081)T(0.003)LDPDTLR;S(0.19)KS(0.751)DS(0.01)YT(0.048)LDPDTLR;S(0.029)KS(0.919)DS(0.02)YT(0.032)LDPDTLR;S(0.179)KS(0.816)DS(0.005)YTLDPDTLR;S(0.031)KS(0.968)DS(0.001)YTLDPDTLR;S(0.233)KS(0.763)DS(0.004)YTLDPDTLR;S(0.012)KS(0.985)DS(0.001)YT(0.001)LDPDTLR;S(0.018)KS(0.977)DS(0.001)YT(0.005)LDPDTLR 174.83 1.8674e-08 18341560000.0 21663420.0 20608260.0 20498890.0 20803910.0 21934450.0 20502260.0 20359840.0 22714560.0 27426210.0 23106280.0 True False 20461706.90764289 19618208.255971085 21820281.24878364 22781107.351476375 23660566.4250514 20374297.79041278 22418011.320089996 22635768.49297815 22446301.62249112 22901576.335613813 0.8934628170473694 0.8566313501076857 0.9527851240026359 0.9947397077663122 1.0331413907197862 0.8896460877555005 0.9788850772349746 0.9883934695699391 0.980120376586711 1.0 24.448943567918228 -4.878659252556652 4.523303587014043 0.978215813030479 0.8755998854681115 0.5793828782485968 0.03536502714612179 0.14558305745375374 5.0216938090235175 0.009547865416351279 0.021287288734320342 1.3223327295186826e-05 4.878659252556652 -0.10261592756236748 SKS(ph)EDMDNVQSK ddPTM_KYSE-520_SHP099_60min_R1 12 SKSEDMDNVQSK 12 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 SKS(1)EDMDNVQSK;S(0.008)KS(0.992)EDMDNVQSK;S(0.006)KS(0.994)EDMDNVQSK;S(0.001)KS(0.997)EDMDNVQS(0.002)K;SKS(0.883)EDMDNVQS(0.117)K;S(0.208)KS(0.792)EDMDNVQSK;SKS(1)EDMDNVQSK;S(0.314)KS(0.686)EDMDNVQSK;S(0.001)KS(0.996)EDMDNVQS(0.003)K;SKS(1)EDMDNVQSK;S(0.092)KS(0.908)EDMDNVQSK;S(0.052)KS(0.948)EDMDNVQSK 240.82 3.8558e-15 13102160000.0 20035832.0 18596206.0 16867926.0 18162150.0 18885896.0 19211536.0 20090306.0 21993990.0 24558564.0 20458716.0 True False 18924404.458519142 17702816.350285735 17955259.499595862 19888275.275350492 20372108.569150914 19091629.677666575 22121230.192971632 21917697.982125875 20099347.84861826 20277467.692880172 0.933272573535594 0.8730289510707272 0.885478392644675 0.9808066557706151 1.0046672926671198 0.9415194227812791 1.0909266644147504 1.0808893060064704 0.9912158733546176 1.0 24.27337415999291 -5.677651230168849 1.0324564150824116 1.0362340418055527 0.8899460732260948 0.5914391970799542 0.04411160556886143 0.3656363589714198 0.8239166623701036 0.020000055340076456 0.033964717316603554 2.1006261609337148e-06 5.677651230168849 -0.14628796857945792 SKS(ph)EEAHAEDSVMDHHFR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSEEAHAEDSVMDHHFR 18 1 Q8NC51-2;Q8NC51;Q8NC51-4;Q8NC51-3 Q8NC51-2;Q8NC51-4 SERBP1 Plasminogen activator inhibitor 1 RNA-binding protein 1 S(0.353)KS(0.647)EEAHAEDSVMDHHFR;S(0.415)KS(0.585)EEAHAEDSVMDHHFR 243.91 6.8681e-24 2259910000.0 743170.0 829380.0 968910.0 1552240.0 771310.0 671970.0 828940.0 831760.0 962400.0 477240.0 True False 701944.8786273338 789535.3398752393 1031367.4889108129 1699764.4229020253 832007.7088464213 667775.9859753845 912737.3448747826 828874.818694244 787652.4201297039 473012.0248871012 1.4839895006789192 1.6691654721963698 2.1804255169981785 3.5934909335713527 1.758956781373593 1.4117526634439572 1.9296282057367047 1.7523335033439802 1.665184770551449 1.0 18.851517334585992 -5.978320468361262 24.999975398579323 1.6182976236367905 2.2489531463092995 0.23607735618237335 0.572349940906727 400.38152710320395 461701.856308142 0.18865785145722536 0.21390174309038515 1.0511859115191156e-06 5.978320468361262 0.630655522672509 SKS(ph)ETGDSSIFR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSETGDSSIFR 12 1 O43166-3;O43166-2;O43166 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 S(0.006)KS(0.974)ET(0.02)GDSSIFR;SKS(0.772)ET(0.028)GDS(0.198)S(0.002)IFR 146.0 4.037e-05 1158080000.0 973130.0 959810.0 1035950.0 1070910.0 1168220.0 1162710.0 1310470.0 1425620.0 1591210.0 1363540.0 True False 919148.5390134383 913699.2868958177 1102728.9945786055 1172688.9644191673 1260152.2677374433 1155453.0956046241 1442945.0965547038 1420674.8569622098 1302286.3751398416 1351460.0964180666 0.6801151890829522 0.676083066986219 0.8159537950852546 0.86772000707034 0.932437643610324 0.8549664904402706 1.0676934527176278 1.0512148014784832 0.9636143742545148 1.0 20.366087484415683 -5.0745437005763625 0.5551244862450359 1.023041231715858 0.5678755157728166 0.8480134131732052 0.05140972428619232 0.6777587566248988 0.2923388002588875 0.03429380359046869 0.1801910774213664 8.422796333792324e-06 5.0745437005763625 -0.45516571594304134 SKS(ph)LKEGLTVQER ddPTM_KYSE-520_SHP099_60min_R1 3 SKSLKEGLTVQER 13 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44 A0A494BZV2 MPRIP Myosin phosphatase Rho-interacting protein 1 SKS(1)LKEGLTVQER;S(0.049)KS(0.941)LKEGLT(0.01)VQER;S(0.172)KS(0.828)LKEGLTVQER 191.14 1.4420999999999999e-08 2439740000.0 975920.0 1053750.0 1163230.0 775810.0 887230.0 733900.0 626760.0 615310.0 1485510.0 736950.0 True False 921783.772151713 1003126.2682890047 1238213.6670338071 849542.7491442189 957049.9533518445 729319.457873617 690119.0173881332 613175.6332244339 1215778.8306596782 730421.1963384239 1.2619893518596983 1.3733531739188867 1.6952050039633697 1.1630861116886355 1.3102713313215755 0.9984916395220594 0.9448233715665371 0.8394822553045586 1.6644900733362276 1.0 19.478369106419162 -5.78033680037561 1.8401489091639378 1.0793953805887513 1.4238932497881922 0.2401279224262065 0.24310756538890615 0.4647923403611426 3.248697724530762 0.08500858727420446 0.11029508639864859 1.6583003775892796e-06 5.78033680037561 0.3444978691994409 SKS(ph)LTNLVAAGDDVLEDQEILMHHPPQVDELDR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSLTNLVAAGDDVLEDQEILMHHPPQVDELDR 33 1 Q7Z5Y7-2;Q7Z5Y7-3;Q7Z5Y7 Q7Z5Y7-2 KCTD20 BTB/POZ domain-containing protein KCTD20 1 S(0.403)KS(0.508)LT(0.089)NLVAAGDDVLEDQEILMHHPPQVDELDR 134.1 1.5344999999999999e-06 66666000.0 2997.2 5561.7 4057.4 4017.9 3900.8 5076.8 5024.6 5481.6 6293.0 6333.6 True False 2830.9393412299273 5294.507583718101 4318.946496069532 4399.760007974319 4207.770767484046 5045.113808056659 5532.535603370372 5462.585609015056 5150.3498336203465 6277.489231466235 0.45096681759957463 0.8434116552807629 0.6880054010161567 0.7008789415233558 0.670295178905665 0.8036833871044762 0.8813293658296147 0.8701863766860113 0.820447418341071 1.0 12.615971933332325 -3.1596578821243453 0.12158749166316703 1.1019892001811038 8.3178972910062215e-16 0.6221639664085268 0.08855266571480325 37.8868292584356 0.5437338194572635 0.7398960740004336 6.848920987511214 0.0006923761793028137 3.1596578821243453 -1.101989200181103 SKS(ph)MDLGIADETK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSMDLGIADETK 13 1 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-8 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 S(0.456)KS(0.544)MDLGIADETK 133.93 1.0855999999999999e-05 636630000.0 1069400.0 1014000.0 876190.0 875060.0 895960.0 904880.0 800020.0 792740.0 1095600.0 852970.0 True False 1010078.2502039509 965285.9179549705 932670.609353567 958225.4393036165 966466.9546849391 899232.3082718079 880893.8290427821 789990.1699669067 896666.6578284516 845413.3494006174 1.1947744271131724 1.1417916675190196 1.1032125409597724 1.1334401567978325 1.143188660754111 1.063659935000254 1.0419682036808617 0.9344425073568985 1.0606251468162549 1.0 19.68929736769269 -6.56013207932406 1.7466877766837232 0.9982697085220573 1.1421104546466512 0.7505066167894638 0.036713726769557725 0.17504325652165104 1.0819533796476852 0.017345032653397294 0.012655592741488805 2.7533912039693744e-07 6.56013207932406 0.14384074612459385 SKS(ph)MSDVSAEDVQNLR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSMSDVSAEDVQNLR 16 1 E9PMS6;E9PJ10 E9PMS6 LMO7 1 SKS(0.962)MS(0.033)DVS(0.004)AEDVQNLR 136.36 3.1671e-05 317600000.0 415290.0 396630.0 335470.0 292420.0 355320.0 337790.0 288650.0 295760.0 490180.0 371740.0 True False 392253.03583990986 377575.29944623244 357094.932970978 320211.50888072146 383281.6625057507 335681.7273131617 317829.55895252497 294734.07759090257 401175.6684322302 368446.67280934396 1.064612777879215 1.024775977938094 0.9691902772474214 0.8690850875084921 1.0402636006543158 0.9110727605535014 0.8626202444145525 0.7999368683223674 1.088829668004146 1.0 18.491096300159256 -4.765438656001595 2.4924096085156715 0.9297189330624017 1.0572925697256663 0.20119822225633832 0.0826585849275048 0.4232322980355521 5.157572915872093 0.02243394318730615 0.07320362417762896 1.716174102209659e-05 4.765438656001595 0.1275736366632646 SKS(ph)NPDFLK ddPTM_KYSE-520_SHP099_60min_R1 6 SKSNPDFLK 9 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.074)KS(0.926)NPDFLK;S(0.022)KS(0.978)NPDFLK;S(0.086)KS(0.914)NPDFLK;SKS(1)NPDFLK;SKS(1)NPDFLK;S(0.001)KS(0.999)NPDFLK 151.74 0.00016549 15316950000.0 32513400.0 26597800.0 26671400.0 28256600.0 29397600.0 30080500.0 30813700.0 32133800.0 32195700.0 28793400.0 True False 30709816.888143983 25320001.763888296 28390681.119748846 30942098.768343437 31711023.870536555 29892756.441705044 33928649.50873175 32022335.34788533 26349772.46754972 28538312.876926225 1.076090833420411 0.8872284032024894 0.9948268926122559 1.084230133077023 1.1111737406234525 1.0474605338661738 1.1888807041625686 1.1220822858724773 0.9233122007311798 1.0 24.766396712548794 -5.199800212089826 4.756341922203445 1.0792941730406511 0.9734754558968352 0.168600112032548 0.0804021575987007 0.30431268024618047 14.112460814212087 0.021799624106900856 0.03836974693807957 6.312476697180884e-06 5.199800212089826 -0.10581871714381597 SKS(ph)NPDFLKK ddPTM_KYSE-520_SHP099_60min_R1 6 SKSNPDFLKK 10 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;H7C3G6;J3QL44;K7EL39;J3QRL2;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.379)KS(0.621)NPDFLKK;S(0.035)KS(0.965)NPDFLKK;S(0.04)KS(0.96)NPDFLKK;S(0.001)KS(0.999)NPDFLKK;SKS(1)NPDFLKK;S(0.061)KS(0.939)NPDFLKK 127.17 0.0003437 90404100000.0 45822510.0 39603400.0 40202440.0 36921870.0 39747210.0 38825840.0 38672660.0 40074580.0 48560370.0 35642500.0 True False 43280644.02539097 37700793.21808472 42793953.60857833 40430913.42383498 42875089.29631086 38583513.53084592 42582069.88159 39935570.63545732 39743030.91530946 35326735.17944543 1.2251526727715685 1.0672028713262078 1.2113758430039592 1.144484855972747 1.2136725649433173 1.0921901878239633 1.2053780137137051 1.1304631020274272 1.1250128468829923 1.0 25.074257088841538 -8.392228435273639 1.121122001914539 0.9999396840059778 1.162221923666094 0.4816998414397149 0.05067514248129719 1.1287950903204742 2.259579056597711 0.04459505407833923 0.01388468154121668 4.052952974280106e-09 8.392228435273639 0.16228223966011623 SKS(ph)PASVDR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSPASVDR 9 1 Q13243-3;Q13243 Q13243-3 SRSF5 Serine/arginine-rich splicing factor 5 1 S(0.138)KS(0.86)PAS(0.003)VDR;S(0.002)KS(0.997)PAS(0.001)VDR 151.7 0.00016582 6263600000.0 5415700.0 4419100.0 4698000.0 4546200.0 4583100.0 4691400.0 4615100.0 4437300.0 5561000.0 4883600.0 True False 5115280.325069702 4206799.802795672 5000840.597065768 4978269.481135134 4943763.8957280945 4662119.2324135285 5081639.347035509 4421908.041973607 4551262.581401989 4840335.103383308 1.056802931163632 0.869113338837882 1.0331599962098221 1.0284968653627744 1.0213681057479866 0.9631810882587013 1.049852797068437 0.9135541129957658 0.9402784072162147 1.0 22.206675500140957 -9.674787487239835 5.30903464293506 0.9999999984289722 0.9854749777844302 0.004620443773306504 0.05991463117666202 9.619218254106527e-10 2.3903650473971493e-10 0.05677646874682604 0.013770315103705064 2.1145234837806984e-10 9.674787487239835 -0.014525020644542086 SKS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPFR 6 1 Q5QP22;Q5QP23;G3XAC6;Q14498-2;Q14498;Q14498-3 Q5QP22;Q14498-3 RBM39 RNA-binding protein 39 1 S(0.024)KS(0.976)PFR 78.149 0.018451 825770000.0 1452600.0 1397800.0 1001100.0 1319700.0 1370700.0 1484000.0 1451900.0 1579900.0 2085900.0 1187400.0 True False 1372021.3823136901 1330647.5898594258 1065632.5078166353 1445123.8912177277 1478566.2917838334 1474737.8055381512 1598672.2211784911 1574419.6956514302 1707153.1412599212 1176880.559783221 1.1658119177076165 1.1306564449535375 0.9054720965166785 1.2279274045311077 1.2563435426753777 1.2530904629861461 1.3583980191438996 1.3377905536492463 1.4505746798760746 1.0 20.166536479715656 -5.475880130804959 7.850573835771047 1.2912773040440428 1.0718505544539336 0.35041228175176387 0.1263138646050968 0.30662986093218597 46.3755438960596 0.034992539067770494 0.051466076165960314 3.342872936029631e-06 5.475880130804959 -0.21942674959010922 SKS(ph)PLPPEEEAK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPLPPEEEAK 12 1 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.035)KS(0.965)PLPPEEEAK 160.63 5.8448e-06 529840000.0 610260.0 429590.0 375410.0 358840.0 356660.0 428380.0 748800.0 425630.0 389820.0 307010.0 True False 576407.66127685 408951.85157226387 399609.5292772375 392944.0457108203 384727.11288219376 425706.3215205073 824496.0115837549 424153.5888727889 319038.51456251094 304290.1302501657 1.8942699876692308 1.3439537169215865 1.3132516948502633 1.2913466676943142 1.264343054984723 1.3990145561754561 2.7095719828504228 1.3939117529841667 1.0484681652350019 1.0 18.21508801476299 SKS(ph)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK ddPTM_KYSE-520_SHP099_60min_R1 3 SKSPLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK 36 2 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 1 S(0.446)KS(0.554)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK;S(0.12)KS(0.88)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK;S(0.104)KS(0.896)PLPPEEEAKDEEEDQTLVNLDTYTSDLHFQVSK 297.75 3.8684e-54 7957800000.0 1864090.0 2558960.0 2269790.0 4020600.0 2064080.0 1893070.0 2099480.0 2201080.0 2892810.0 1679860.0 True False 1760685.2117287132 2436023.7205227315 2416104.2951924084 4402716.615162533 2226511.3529913006 1881254.6479313392 2311715.92735024 2193444.967215935 2367548.6258056983 1664977.7473113048 1.057482728866474 1.4630968638809456 1.451133085168293 2.6443095844807987 1.3372619283271445 1.129897772489326 1.3884365308084883 1.317401971742882 1.421970131209827 1.0 20.667071464904097 -5.9708719750386825 24.999874503469123 1.274783193499484 1.671491544619586 0.19028079910745066 0.3934797304740859 373.9892354223931 320984.2812469878 0.12673835710416165 0.14370571767983384 1.0693700706203262e-06 5.9708719750386825 0.39670835112010194 SKS(ph)PPKSPEEEGAVS(ph)S ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPPKSPEEEGAVSS 16 2 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 2 S(0.258)KS(0.742)PPKS(0.036)PEEEGAVS(0.702)S(0.263) 130.27 0.00028589 1742500000.0 2034600.0 1782900.0 1613400.0 1786200.0 1820500.0 1820300.0 1783300.0 1855700.0 2062500.0 1866100.0 True False 1921736.6821254538 1697246.8078125427 1717402.3455312732 1955959.9109593884 1963762.9927719214 1808938.832493998 1963573.3673308094 1849263.0098236366 1688001.991393925 1849567.8058038293 1.039019319051274 0.9176450857798709 0.9285425168745751 1.0575226843923793 1.0617415520586782 0.9780332609692167 1.0616390278686931 0.9998352069174018 0.9126467200051164 1.0 20.818756760461287 -5.251449980365146 24.95189739928523 1.013146017532201 0.957326586221365 0.14924341546734154 0.05238534698772255 1173.81731871994 2931998.589373719 0.014472127345116846 0.024684937790715733 5.60466965130165e-06 5.251449980365146 -0.05581943131083589 SKS(ph)PPKVPIVIQDDSLPAGPPPQIR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPPKVPIVIQDDSLPAGPPPQIR 25 2 Q7Z422-4;Q7Z422-5;Q7Z422;Q7Z422-2;Q7Z422-3 Q7Z422-4 SZRD1 SUZ domain-containing protein 1 1 S(0.117)KS(0.883)PPKVPIVIQDDSLPAGPPPQIR 233.6 1.3012e-28 8313300000.0 2566000.0 2935000.0 2051200.0 1789300.0 2010000.0 2409600.0 1895100.0 2182900.0 3047800.0 2504000.0 True False 2423658.8648058157 2793998.194475183 2183423.634036039 1959354.53402734 2168175.564664412 2394560.792604261 2086675.202393662 2175328.0293926913 2494396.3487856505 2481816.508082524 0.9765665015575058 1.125787577516701 0.8797683579447917 0.7894840443063845 0.8736244430655213 0.9648419956938405 0.8407854471102088 0.8765063905040149 1.005068803701707 1.0 21.24296502376697 -4.775491512251501 24.993124804435514 0.8941242907362293 1.0511770394995488 0.3848798029669841 0.07374562503899394 186.99580775889567 332591.9331317374 0.01902188105989274 0.03990376037521798 1.676905108464632e-05 4.775491512251501 0.15705274876331943 SKS(ph)PPPER ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPPPER 8 1 Q9NXL9-4;Q9NXL9 Q9NXL9-4 MCM9 DNA helicase MCM9 1 S(0.04)KS(0.96)PPPER 55.353 0.056939 0.0 204140.0 161330.0 174500.0 166830.0 214170.0 183770.0 188440.0 213300.0 214750.0 263750.0 True False 192815.94725699924 153579.46463873304 185748.54920987162 182685.47304073168 231023.96053939158 182623.02326397976 207489.35419717222 212560.11208459444 175756.81340695536 261413.38019439526 0.7375901995284831 0.5874965716159077 0.7105548655227331 0.6988374998436614 0.8837495631156862 0.6985986070344812 0.7937212473320094 0.8131187161365957 0.6723328900619281 1.0 17.9959734604289 -13.999999999996486 0.13468869454755356 1.8641832335334434 0.6350027946287582 0.5232305675368706 0.07712813448315652 113.24693611950809 0.9481120910223308 26.55722705786036 0.531570741659456 1.0000000000080904e-14 13.999999999996486 -1.2291804389046852 SKS(ph)PRDPDANWDSPSR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPRDPDANWDSPSR 16 2 Q9UHB7;Q9UHB7-2;Q9UHB7-3 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.094)KS(0.906)PRDPDANWDSPSR 150.91 4.4009e-06 660600000.0 244680.0 265320.0 222710.0 164130.0 184320.0 193690.0 190580.0 167510.0 238440.0 178130.0 True False 231107.11264251245 252573.62894656076 237066.24294859907 179728.86585251603 198824.93536265873 192481.10886434247 209845.68628155984 166928.9469071279 195145.30658325672 176551.90678304277 1.3090037760198778 1.4305913402393207 1.3427566276014218 1.017994476113913 1.1261556954294827 1.0902239028257816 1.1885778528545172 0.9454950102139643 1.1053140696070907 1.0 17.429732876908353 -5.219763114526567 6.734010618994261 1.0738479484434802 1.3700411956787748 0.7818724909811967 0.07086548761789886 0.09815277179065925 12.514343549266254 0.018803021386771243 0.03244166783024029 6.028883412252703e-06 5.219763114526567 0.2961932472352946 SKS(ph)PSPPR ddPTM_KYSE-520_SHP099_60min_R1 6 SKSPSPPR 8 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.001)KS(0.998)PS(0.001)PPR;S(0.013)KS(0.643)PS(0.345)PPR;S(0.001)KS(0.982)PS(0.017)PPR;S(0.031)KS(0.909)PS(0.06)PPR;S(0.01)KS(0.671)PS(0.319)PPR;S(0.03)KS(0.628)PS(0.342)PPR 134.57 0.00048604 10257970000.0 3010350.0 2780050.0 2640130.0 2269720.0 2514050.0 2587920.0 2420780.0 2463830.0 3169540.0 2562570.0 True False 2843359.884516051 2646492.2250598753 2810317.0041573583 2485433.5063838013 2711891.432012217 2571767.8313398166 2665496.0669360575 2455283.548792247 2594031.4336013063 2539867.6234492925 1.1194913696543751 1.0419803774913987 1.1064816836165576 0.9785681282902585 1.067729438721419 1.0125597915403173 1.0494625949505803 0.9666974475850143 1.021325446118509 1.0 21.27632187578224 -1.0000000000000002 0.2839380350734285 0.9978648999290176 1.8610817876287296 0.46237760237064085 0.03540998191362401 45.61124907142526 0.6449809392007156 0.03627865521559293 19.628676266627114 0.09999999999999995 1.0000000000000002 0.8632168876997119 SKS(ph)PTISDK ddPTM_KYSE-520_SHP099_60min_R1 5 SKSPTISDK 9 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 SKS(0.785)PT(0.215)ISDK;S(0.002)KS(0.499)PT(0.499)ISDK;SKS(0.5)PT(0.5)ISDK;S(0.019)KS(0.892)PT(0.089)IS(0.001)DK;SKS(0.497)PT(0.497)IS(0.005)DK 205.02 1.2017e-06 9976940000.0 12774800.0 10834400.0 10402400.0 10352700.0 11802100.0 10098500.0 10624000.0 10968300.0 13580600.0 10310400.0 True False 12066156.378067572 10313899.161234042 11072955.34842848 11336617.495347233 12730858.125236753 10035471.515651627 11697977.600248145 10930253.527320474 11114705.379066342 10219057.877369821 1.1807503708133569 1.0092808246124378 1.083559314499003 1.10936033745853 1.2457956768626717 0.9820349034205249 1.1447217288154716 1.0695950310180355 1.0876448213176226 1.0 23.284758860653557 -8.66770939344909 0.6783837020726753 0.9975124889967963 1.1053050149848285 0.1597442270327265 0.07252378796131176 4.63008384809934 3.141150684030536 0.09819589398007876 0.02710098057095606 2.149268167931316e-09 8.66770939344909 0.10779252598803213 SKS(ph)PTLR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSPTLR 7 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.068)KS(0.839)PT(0.093)LR;S(0.002)KS(0.94)PT(0.058)LR 125.82 0.0014792 1041670000.0 1063820.0 884050.0 921430.0 830980.0 949900.0 987230.0 915770.0 937130.0 1120660.0 993770.0 True False 1004807.7839274076 841578.9110138968 980826.8521401274 909956.0893567526 1024651.7258083209 981068.3313756248 1008344.9686539206 933879.3147577859 917176.3935396427 984965.9709413609 1.0201446685179218 0.8544243515434092 0.9957977037549047 0.9238452050146269 1.040291498425099 0.9960428688089488 1.0237358430669596 0.9481335825899142 0.9311757163174584 1.0 19.909714356973147 -5.7331521988237935 24.999156472824524 0.9893025947435669 0.9452041336193022 0.13541511563188446 0.050884163927514124 423.28999592068004 374086.2023380657 0.014714172580316315 0.01899189499915342 1.848620654963217e-06 5.7331521988237935 -0.04409846112426463 SKS(ph)PVGNPQLIQFSR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSPVGNPQLIQFSR 15 1 G8JLP4;Q9Y4F3-3;Q9Y4F3-4;Q9Y4F3-5;Q9Y4F3 G8JLP4 KIAA0430 Meiosis arrest female protein 1 1 S(0.002)KS(0.966)PVGNPQLIQFS(0.032)R;S(0.051)KS(0.949)PVGNPQLIQFSR 138.55 2e-05 1145340000.0 803990.0 672140.0 738020.0 628590.0 637140.0 680700.0 633530.0 665380.0 870750.0 623850.0 True False 759391.0719856694 639849.385497291 785593.9500737512 688331.0046075255 687279.2931692951 676451.4988071562 697573.3950569652 663071.9520808598 712643.7498212165 618323.1743479556 1.2281459008656357 1.034813851465353 1.2705232193540033 1.1132220708586504 1.1115211618811736 1.094009616444506 1.1281695786229942 1.0723711799741185 1.1525425204590227 1.0 19.2380015523145 -13.999999965415347 0.09405821885085947 0.588129023655266 1.2284969056449384 0.32447869074954483 0.06376713712775116 243.04426217703733 1.5724581429817313 19.966380609738984 1.2449101262844584 1.0000000796341105e-14 13.999999965415347 0.6403678819896724 SKS(ph)QSSSNCSNPISVPLRR ddPTM_KYSE-520_SHP099_60min_R1 2 SKSQSSSNCSNPISVPLRR 19 2 P35568 P35568 IRS1 Insulin receptor substrate 1 1 S(0.162)KS(0.804)QS(0.025)S(0.005)S(0.002)NCS(0.002)NPISVPLRR;S(0.007)KS(0.902)QS(0.031)S(0.031)S(0.027)NCS(0.002)NPISVPLRR 114.63 3.1324e-05 1713810000.0 229270.0 233830.0 275880.0 223040.0 216280.0 246100.0 208587.0 213880.0 360590.0 229330.0 True False 216551.93606158593 222596.45581401465 293663.66622360685 244237.65454057895 233300.00553513356 244563.99861384035 229673.00957294408 213138.1001999671 295115.9457341748 227298.31461604044 0.9527212572050627 0.979314150173228 1.2919746753057666 1.074524705355396 1.0264044673152608 1.0759604576345656 1.0104474815878641 0.9377020703387386 1.2983639858161469 1.0 17.794227461258235 -5.5359304393099675 24.08810986576973 1.0532579291950093 1.0848202912321607 0.001323853984348311 0.12281304072103681 1024.373122842761 1890562.24295222 0.0366188071315982 0.04730035442849907 2.9111833632421596e-06 5.5359304393099675 0.03156236203715146 SKS(ph)S(ph)DPDLRR ddPTM_KYSE-520_SHP099_60min_R1 1 SKSSDPDLRR 10 2 O60293-2;O60293 O60293-2 ZFC3H1 Zinc finger C3H1 domain-containing protein 2 S(0.411)KS(0.663)S(0.926)DPDLRR 56.951 0.039439999999999996 314510000.0 482810.0 455610.0 433240.0 422410.0 419580.0 428540.0 466670.0 568450.0 615350.0 418570.0 True False 456027.56684212683 433721.8117154474 461167.3436085089 462555.7193978023 452598.5589163649 425865.3229011581 513845.5578602971 566478.1796272281 503617.951711152 414861.7954425325 1.0992276749795262 1.045460961891651 1.1116168051015214 1.1149634034254583 1.090962252702924 1.0265233568853651 1.2385945476424955 1.3654623921756077 1.2139415035167154 1.0 18.662271280204095 -6.774110944573959 24.974137743903874 1.2349548668504 1.0831484930335884 0.290955997006904 0.08914023126404856 226.29632949796644 445998.9049456609 0.03548982084734674 0.024105418086481818 1.6822442611959628e-07 6.774110944573959 -0.1518063738168116 SKS(ph)VIEQVSWDT ddPTM_KYSE-520_SHP099_60min_R1 1 SKSVIEQVSWDT 12 1 Q6WCQ1;H0Y7E2 Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.221)KS(0.779)VIEQVSWDT 105.58 0.0011104 2441300000.0 2248200.0 2761200.0 2629000.0 2354900.0 2413500.0 2504600.0 2769100.0 2785200.0 3217100.0 3003100.0 True False 2123487.8643244114 2628547.8073543003 2798469.5465487274 2578708.9879734963 2603428.719063463 2488967.8623658 3049027.651811665 2775538.791270567 2632955.7364913444 2976494.870376446 0.7134189564572802 0.8831017427629096 0.9401896083882036 0.8663576119811555 0.8746625922235169 0.8362076774051397 1.0243685222363732 0.9324856625469463 0.8845826554904652 1.0 21.505182977384525 -4.271770974221574 3.345520670465788 0.9147058806590653 0.6889046427317062 0.5467488828801181 0.055971211551844584 0.2392637694276517 4.494567273458905 0.014443438360090977 0.13704729750305267 5.3484633697408057e-05 4.271770974221574 -0.22580123792735918 SKSDGEAKPEPSPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 SKSDGEAKPEPSPSPR 16 2 K7ENQ6;K7ERQ1;P26358;K7EJL0 K7ENQ6;P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 SKSDGEAKPEPS(0.013)PS(0.987)PR;SKSDGEAKPEPS(0.042)PS(0.958)PR;SKSDGEAKPEPS(0.006)PS(0.994)PR;SKSDGEAKPEPS(0.003)PS(0.997)PR;SKSDGEAKPEPS(0.004)PS(0.996)PR;SKSDGEAKPEPS(0.007)PS(0.993)PR;SKSDGEAKPEPS(0.036)PS(0.964)PR;SKSDGEAKPEPS(0.003)PS(0.997)PR 166.27 3.7488000000000005e-08 15376410000.0 13228730.0 12155470.0 11772480.0 11050370.0 11187070.0 10781310.0 10229250.0 10153840.0 12181620.0 11291580.0 True False 12494905.976080526 11571502.975467548 12531352.897433985 12100593.84238512 12067428.763278745 10714019.845166119 11263322.417859396 10118618.69896408 9969744.881650446 11191545.385916308 1.116459393695923 1.033950413142173 1.1197160414685645 1.0812263566042255 1.0782629518229598 0.9573315816284749 1.0064135049689755 0.9041306048490477 0.8908282581060339 1.0 23.41590592900295 -6.394383009828949 1.4570863953693145 0.9341253871801269 1.0895700888128235 0.7217634064775398 0.04126337099331225 0.20930817969763935 0.8935543791896984 0.01955991861975723 0.015904294285116066 4.0328956988563883e-07 6.394383009828949 0.15544470163269652 SKSEDMDNVQS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 SKSEDMDNVQSK 12 1 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 SKS(0.145)EDMDNVQS(0.855)K 232.37 5.8885e-15 2082600000.0 2989900.0 2461900.0 2430100.0 2472400.0 2826100.0 2668700.0 2779900.0 3150400.0 3381700.0 3167700.0 True False 2824044.2867821143 2343626.6286127614 2586748.1342974757 2707376.1526458343 3048497.9916905924 2652043.6533960016 3060919.4212095095 3139471.997708887 2767668.525719676 3139636.64243331 0.8994812484394364 0.7464642872801938 0.8239004792263701 0.8623214916193419 0.9709715928553814 0.8446976371573337 0.9749279199510195 0.9999475593060044 0.881525106540562 1.0 21.58216617159629 -5.56548068781977 3.3030454963415825 0.9418510988325194 0.8171592113209966 0.4771166437708949 0.05821922874452968 0.20730362816936737 4.665077253852611 0.017423815360509284 0.02417003136294883 2.719689422391467e-06 5.56548068781977 -0.12469188751152283 SKSERPPTILMTEEPSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSERPPTILMTEEPSSPK 19 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SKSERPPTILMTEEPS(0.089)S(0.911)PK 187.62 7.2669e-13 1810000000.0 877430.0 780240.0 786270.0 806010.0 789190.0 912790.0 850050.0 979700.0 1337500.0 1129100.0 True False 828757.2087866599 742756.0992358836 836954.222276481 882612.9480642572 851294.7631231372 907092.9390277404 935981.34968853 976301.6493636982 1094643.7156312114 1119097.0524265077 0.7405588344546956 0.6637101738632818 0.7478835016692573 0.7886831139001854 0.7606978869949643 0.8105578841986184 0.836371919360405 0.8724012338758376 0.9781490472678176 1.0 20.093903727160235 -7.115765669336231 0.5053347141281705 1.0142641753405108 0.7068710581063211 0.9117829357837951 0.02984207468956321 0.24399184077319494 0.14004262997019265 0.03066819542461797 0.022167918856347328 7.660098084993544e-08 7.115765669336231 -0.3073931172341897 SKSEVIEDS(ph)DVETVSEK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSEVIEDSDVETVSEK 17 1 E5RFE4;Q56NI9 E5RFE4 ESCO2 N-acetyltransferase ESCO2 1 SKSEVIEDS(1)DVETVSEK 108.4 9.8483e-05 0.0 218270.0 219610.0 219280.0 201080.0 201470.0 215510.0 155590.0 224940.0 257810.0 216690.0 True False 206162.12798954232 209059.60595866948 233415.1396604051 220190.5827430934 217324.5427925071 214164.9221506245 171318.5556120677 224159.7356413904 210998.20286122055 214770.29518226878 0.959919190941089 0.9734102464274549 1.0868129573613197 1.0252376035346256 1.0118929277816124 0.9971812999971411 0.7976827310623894 1.0437185247203442 0.9824366199345819 1.0 17.712434942821936 -6.541248554628017 24.999693248065498 0.9507211848350482 1.0133177405430653 0.13026649723998418 0.06744865996731092 472.7607789473666 643380.1378574105 0.02616301357979361 0.020269343332678248 2.8757520984614745e-07 6.541248554628017 0.06259655570801714 SKSPEILS(ph)STK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPEILSSTK 11 1 Q4KMZ1;Q4KMZ1-3 Q4KMZ1 IQCC IQ domain-containing protein C 1 SKS(0.151)PEILS(0.773)S(0.063)T(0.014)K 179.67 6.6513999999999995e-06 422730000.0 514620.0 519870.0 476970.0 475280.0 470700.0 511180.0 456970.0 476290.0 579340.0 481060.0 True False 486073.0027304637 494894.66485922097 507716.2493789831 520450.46830185695 507741.4120833527 507989.5360074068 503164.9871974197 474637.86115692183 474146.45997292374 476798.1826590169 1.019452297447366 1.0379541761239173 1.0648451857503771 1.0915529614634836 1.0648979600798203 1.065418356199349 1.0552997169396912 0.995469107096744 0.9944384798798833 1.0 18.86301921134045 -7.2510685837551225 6.05354163263098 0.9958986207171507 1.0587336536326037 0.7053360642401674 0.01787956557232322 0.09218133804959688 15.092927481527408 0.010152678176336331 0.0054023682346190415 5.609593823696899e-08 7.2510685837551225 0.062835032915453 SKSPS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 5 SKSPSPPR 8 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.001)KS(0.091)PS(0.908)PPR;S(0.005)KS(0.181)PS(0.814)PPR;S(0.001)KS(0.013)PS(0.986)PPR;S(0.008)KS(0.354)PS(0.637)PPR;S(0.002)KS(0.253)PS(0.745)PPR 94.363 0.004304 5160140000.0 2452020.0 2201700.0 2052840.0 1841890.0 1817470.0 2121530.0 1810600.0 2080340.0 2557790.0 1972910.0 True False 2316001.5626193136 2095927.0271809252 2185169.351060134 2016942.671815578 1960494.5490102638 2108288.7443284024 1993633.1177531304 2073123.786095007 2093359.8126387685 1955431.552300752 1.1843940842083256 1.0718488329161238 1.1174870061235709 1.0314565444351413 1.0025891965911846 1.0781705664142525 1.019536130225285 1.060187345169806 1.0705359695028602 1.0 20.899055606348984 -1.0000068951093877 0.6969112743572501 1.0404561404089705 18.354286209143382 0.642140694182864 0.03197909268587242 180.47694789914152 0.968428293573244 0.012397735888806521 4866.192548072308 0.09999841235499415 1.0000068951093877 17.31383006873441 SKSPT(ph)ISDK ddPTM_KYSE-520_SHP099_60min_R1 1 SKSPTISDK 9 1 O15014 O15014 ZNF609 Zinc finger protein 609 1 SKS(0.234)PT(0.766)ISDK 142.71 0.0012321 2723500000.0 2944200.0 2625800.0 2313100.0 2453600.0 2285900.0 2195200.0 2214300.0 2238300.0 2896100.0 2115600.0 True False 2780879.356882809 2499652.626593844 2462206.1270908574 2686789.4062982616 2465787.325008145 2181498.9425319047 2438143.053485455 2230535.8597231447 2370241.2447398542 2096857.4299118945 1.3262128923088756 1.1920946989223173 1.1742363080900136 1.2813410048632419 1.1759441962211767 1.040365888215665 1.1627605285438507 1.063751797286889 1.1303778744935686 1.0 20.999797341988327 -6.03835511017728 5.023098517703135 1.089488920438167 1.2347235362943223 0.6343139793157928 0.058510648760514955 0.13969105452779945 8.689190742320301 0.018598970045839026 0.019276622619929535 9.154716290334768e-07 6.03835511017728 0.14523461585615527 SKT(ph)FDWAEFR ddPTM_KYSE-520_SHP099_60min_R1 4 SKTFDWAEFR 10 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.018)KT(0.982)FDWAEFR;S(0.173)KT(0.827)FDWAEFR;S(0.01)KT(0.99)FDWAEFR;S(0.019)KT(0.981)FDWAEFR 175.45 7.8999e-05 1461100000.0 1508182.0 1540190.0 1414308.0 1851320.0 1830930.0 1704890.0 1935760.0 1996860.0 1941140.0 1817180.0 True False 1424520.13797372 1466196.9605276764 1505476.55665281 2027268.896180347 1975013.7744333365 1694249.149113166 2131445.5119970194 1989933.358730626 1588677.9081572853 1801081.1989446466 0.7909249948355607 0.8140648857957112 0.8358737837777398 1.1255843975098048 1.0965712015597113 0.9406844900196174 1.1834255519662031 1.1048548837757222 0.8820690089309576 1.0 20.780431793696664 -5.194663167905667 6.240334760712952 1.055008419087744 0.810387497468561 0.6127608798281474 0.08515979905173061 0.15154383320854356 11.218913862836244 0.02318840640113205 0.04048198503414353 6.387587055125782e-06 5.194663167905667 -0.24462092161918303 SKT(ph)FDWAEFRPIQQALAQER ddPTM_KYSE-520_SHP099_60min_R1 1 SKTFDWAEFRPIQQALAQER 20 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 S(0.149)KT(0.851)FDWAEFRPIQQALAQER 77.19 0.020061000000000002 8721000000.0 109510.0 139860.0 148720.0 142260.0 131780.0 116130.0 116020.0 138750.0 155600.0 120010.0 True False 103435.2619972273 133140.91566586023 158306.7291604133 155780.3476279712 142150.33627436607 115405.18959376385 127748.4338460833 138268.70863449332 127346.96235679733 118946.80476636729 0.8695926065470406 1.1193315863118198 1.3309035872914443 1.3096639958841396 1.1950748618558913 0.9702252180749218 1.0739963473336167 1.1624415544921756 1.0706211285534692 1.0 16.859956992020532 -6.2293052207421775 24.45219046164614 1.0667681383240366 1.1796444135955584 0.1477713529357364 0.12758969912534596 1065.4352336121062 810732.6322738959 0.045450066495532494 0.045446309278629665 5.897864345049372e-07 6.2293052207421775 0.11287627527152178 SKT(ph)PLVAR ddPTM_KYSE-520_SHP099_60min_R1 1 SKTPLVAR 8 1 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7;H7BZ26 P28290-3 SSFA2 Sperm-specific antigen 2 1 S(0.118)KT(0.882)PLVAR 132.25 0.0021199 3872200000.0 1802900.0 1736600.0 1686100.0 1496700.0 1420900.0 1552900.0 1568600.0 1599500.0 1958500.0 1767200.0 True False 1702889.5430079547 1653171.1293102563 1794788.703855387 1638945.9180007367 1532716.7461849044 1543207.7750809938 1727169.396060732 1593951.7078261066 1602885.7697672714 1751543.9828607945 0.972221970827491 0.9438364925385054 1.024689486200604 0.9357149657891254 0.8750660909362493 0.8810556801208466 0.9860839424881289 0.9100266527265318 0.9151273307732074 1.0 20.740195785302262 -5.502936823533012 24.546173500776863 0.9222739289243724 0.9772070757266542 0.23271529457248863 0.04199366618367916 837.0436891286764 1030302.3841237797 0.011799804250887447 0.01722233291085253 3.1409655743658186e-06 5.502936823533012 0.054933146802281785 SKT(ph)PPPPPQTAQTK ddPTM_KYSE-520_SHP099_60min_R1 2 SKTPPPPPQTAQTK 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 SKT(1)PPPPPQTAQTK;S(0.021)KT(0.979)PPPPPQTAQTK 261.64 3.7213999999999996e-24 2554100000.0 2432600.0 2692400.0 2028930.0 1781950.0 1790530.0 2670100.0 1972300.0 2504600.0 2789200.0 2488000.0 True False 2297658.828732122 2563053.062625211 2159718.0742027783 1951305.9922371951 1931434.5242778948 2653434.915476697 2171679.331793052 2495912.1271780315 2282751.5900101475 2465958.2556347107 0.9317509018986738 1.039374067573382 0.8758129093498748 0.7912972524082531 0.7832389375872726 1.0760258854397078 0.8806634608800731 1.0121469499635187 0.925705690594747 1.0 21.233716946964954 -6.2620577453348645 24.99999302419852 0.9735272685504474 0.8872725834394716 0.24363996662555876 0.0829985676321137 103.05446549340732 4166312.594897507 0.03054422214602146 0.02857612885798439 5.469432345463601e-07 6.2620577453348645 -0.08625468511097578 SKT(ph)PS(ph)SPCPASK ddPTM_KYSE-520_SHP099_60min_R1 1 SKTPSSPCPASK 12 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 2 S(0.392)KT(0.607)PS(0.658)S(0.343)PCPASK 67.415 0.022818 0.0 797840.0 813780.0 638520.0 645510.0 656990.0 765470.0 605920.0 689680.0 833070.0 649080.0 True False 753582.2247453919 774684.7872913164 679680.0208681225 706859.0763203421 708691.3752382442 760692.4177933214 667172.3068093327 687287.6610525213 681805.487985715 643329.6561765985 1.171378029149224 1.2041801273321993 1.056503480513489 1.0987509584453299 1.101599107757755 1.1824302058671239 1.0370613268078368 1.0683288955419397 1.059807334295428 1.0 19.29519866993428 -1.0000000003020681 0.09129670183380996 0.9297640950648459 1.6120639616857868 0.5231929360069538 0.04431080098470077 129.82112039003664 0.8525280383804497 0.8184180512007289 11.090690926236958 0.09999999993044624 1.0000000003020681 0.6822998666209409 SKT(ph)PSS(ph)PCPASK ddPTM_KYSE-520_SHP099_60min_R1 2 SKTPSSPCPASK 12 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 2 SKT(0.998)PS(0.162)S(0.839)PCPASK;S(0.066)KT(0.896)PS(0.421)S(0.537)PCPAS(0.08)K 167.21 4.5023e-06 1167100000.0 4951400.0 4590200.0 4461500.0 4332200.0 4341100.0 4192600.0 4206800.0 4564400.0 5591500.0 4446100.0 True False 4676735.971628804 4369679.901969335 4749095.428652395 4743930.98547658 4682719.872519737 4166432.428233995 4632064.398411507 4548567.161738968 4576224.5502444245 4406711.013013459 1.0612758489989325 0.9915966554342304 1.0776961354234122 1.0765241858309467 1.0626337553543213 0.9454743948332675 1.0511386802385174 1.0321909352137215 1.038467132682487 1.0 22.07127085877759 SKT(ph)PVQAAAVSIVEKPVTR ddPTM_KYSE-520_SHP099_60min_R1 1 SKTPVQAAAVSIVEKPVTR 19 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 S(0.069)KT(0.931)PVQAAAVSIVEKPVTR 168.06 2.0574e-08 811450000.0 401990.0 440110.0 289820.0 269640.0 352800.0 382680.0 305230.0 418470.0 442660.0 388190.0 True False 379690.81335280254 418966.45498142147 308502.26092839555 295266.5045297779 380563.35284258955 380291.552172062 336085.6271577313 417018.4252416322 362284.1025505137 384750.9386072499 0.9868483095252104 1.0889290004022536 0.8018232835120169 0.767422441121536 0.9891161129331644 0.988409680165225 0.8735147687340779 1.0838659075171762 0.9416068063717705 1.0 18.553565320476647 -7.252679874003101 24.75474860285615 1.0095522703640207 0.9278419759537995 0.12920535580297665 0.09573436320531968 1235.1993316716419 3490738.8238281296 0.04908908205534141 0.02779656181346652 5.588820045633398e-08 7.252679874003101 -0.08171029441022126 SKTDGS(ph)QKTESSTEGK ddPTM_KYSE-520_SHP099_60min_R1 1 SKTDGSQKTESSTEGK 16 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.037)KT(0.277)DGS(0.685)QKT(0.001)ESSTEGK 156.74 1.3416999999999998e-06 517180000.0 249150.0 198260.0 200230.0 178860.0 208740.0 189820.0 174630.0 218590.0 234310.0 199910.0 True False 235329.1528317887 188735.29200567288 213137.14617932725 195858.8006237803 225166.6504318652 188635.262969846 192283.3046245608 217831.76230928948 191765.2104744295 198138.95292762664 1.187697569582627 0.9525400695672971 1.075695329111681 0.988492155277114 1.1364077941509605 0.9520352267065224 0.9704467586179044 1.0993888838650316 0.9678319565182862 1.0 17.596153007723967 -6.281058376655513 24.98985953637591 1.0024340141619008 1.0577348068946206 0.17944251935496058 0.07309549799793269 1804.8357846332212 2298917.9344024663 0.024707910013529157 0.02181287918932544 5.2353006040236e-07 6.281058376655513 0.05530079273271982 SKTDLLVNDNPDPAPLS(ph)PELQDFK ddPTM_KYSE-520_SHP099_60min_R1 2 SKTDLLVNDNPDPAPLSPELQDFK 24 1 Q9UHF7;Q9UHF7-3;Q9UHF7-2;H0YC29;E5RJ97;E5RFF3 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 1 SKTDLLVNDNPDPAPLS(1)PELQDFK;SKTDLLVNDNPDPAPLS(1)PELQDFK 119.89 0.00012849 589411000.0 260790.0 236001.0 207983.0 201971.0 213788.0 266850.0 184833.0 282140.0 346500.0 314080.0 True False 246323.45882802407 224663.15771527716 221389.91696456593 221166.26311520475 230611.89931267413 265184.4901670182 203517.72343624465 281161.3221919709 283584.33455417893 311297.4955505424 0.7912799246662455 0.7216992135383267 0.7111843819142483 0.7104659249637173 0.7408087203041179 0.85186837015193 0.6537724406562129 0.9031917256344307 0.9109753165622114 1.0 18.247934444525796 -7.406073020504947 5.230250800849412 0.9409597651649071 0.7418797087854991 0.7400917915243651 0.05410972126248223 0.1156190786146716 4.454681308565896 0.03060360500205167 0.01407723101536309 3.92578923229393e-08 7.406073020504947 -0.19908005637940795 SKTPS(ph)SPCPASK ddPTM_KYSE-520_SHP099_60min_R1 1 SKTPSSPCPASK 12 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 S(0.104)KT(0.104)PS(0.477)S(0.315)PCPASK 76.82 0.0096072 459960000.0 540660.0 488850.0 543870.0 405150.0 507400.0 526000.0 412090.0 525270.0 636950.0 548100.0 True False 510668.51202101115 465364.9122211901 578928.7304227679 443655.3341872103 547329.4932889171 522717.0388902074 453748.0788108298 523447.9609689399 521295.9362028418 543244.260415347 0.9400348042896405 0.8566402742394134 1.0656877073678381 0.8166774442274012 1.0075200663334145 0.9622136430683224 0.8352560935736508 0.9635591190024329 0.9595976877956811 1.0 19.05124150129563 -7.886965712087579 2.213627580801698 0.9964259789640534 0.9287389481536981 0.08286584641384942 0.07325547889928333 0.7287959234525904 7.51433950953851 0.06591889473367057 0.018443792688298 1.297281688414773e-08 7.886965712087579 -0.06768703081035532 SKTQLS(ph)PSIK ddPTM_KYSE-520_SHP099_60min_R1 1 SKTQLSPSIK 10 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 S(0.101)KT(0.017)QLS(0.874)PS(0.008)IK 100.93 0.0031306999999999997 252660000.0 421610.0 388380.0 405460.0 320530.0 362090.0 394100.0 268060.0 354080.0 527280.0 383650.0 True False 398222.4528413021 369721.64182973467 431596.60035893787 350993.0748291419 390584.4229897197 391640.27571602724 295158.12081349 352851.77912289335 431539.2436471218 380251.1594751838 1.0472616398880201 0.9723090452637099 1.1350303335159324 0.9230558963017406 1.02717483762258 1.0299515621637092 0.7762188581380323 0.927943992622911 1.1348794944970713 1.0 18.536593121509654 SKTS(ph)PVVSGSSSK ddPTM_KYSE-520_SHP099_60min_R1 2 SKTSPVVSGSSSK 13 1 H0Y2V6;Q5SW79-2;Q5SW79-3;Q5SW79 H0Y2V6 CEP170 Centrosomal protein of 170 kDa 1 SKT(0.118)S(0.881)PVVSGSSSK;SKT(0.023)S(0.977)PVVSGSSSK 232.26 6.2849e-14 444760000.0 1374000.0 1320160.0 1238570.0 1140410.0 1038430.0 1251920.0 1126630.0 1236220.0 1439750.0 1286370.0 True False 1297781.4809989072 1256737.5319994416 1318410.2039820694 1248794.2235232312 1120148.533141525 1244106.302903855 1240520.7552492055 1231931.8413559173 1178327.6931439526 1274973.7625807158 1.0178887747242935 0.985696779716971 1.0340684982516286 0.9794666056464615 0.8785659485840681 0.9757897294965655 0.9729774773860657 0.9662409357054721 0.9241976013364082 1.0 20.282036127793276 -5.521913897246667 24.99991961176866 0.9511979908160886 1.0093495104779693 0.39341523221610064 0.033067899225161825 35.99665214788334 932720.0726519807 0.00958913359295408 0.012543069555283146 3.006672343141498e-06 5.521913897246667 0.0581515196618807 SKVDDLR ddPTM_KYSE-520_SHP099_60min_R1 4 SKVDDLR 7 1 P62191;P62191-2 P62191 PSMC1 26S protease regulatory subunit 4 0 ;;; 84.568 0.010039 2050910000.0 10555700.0 10467300.0 7253900.0 6978300.0 10141700.0 10213600.0 7443400.0 9815300.0 9460000.0 8675300.0 False True 9970154.278733727 9964435.196262391 7721498.000650365 7641515.533897595 10939794.091620421 10149853.133857438 8195851.5125835 9781253.015208239 7742302.467193457 8598443.59128126 1.1595301141294185 1.1588649841659988 0.8980111247667998 0.8887091544853558 1.2722993383027212 1.1804291120952743 0.9531784939420915 1.1375608749851354 0.900430686670327 1.0 23.035644109795832 -7.7645274848053685 24.999276806198132 0.9502153315589162 1.076574727460952 0.1504215782821795 0.12402764522910244 175.6551147431441 1421869.8273339828 0.10944705845423479 0.03291703160166887 1.7197784997147137e-08 7.7645274848053685 0.12635939590203582 SKVDEAVAVLQAHHAK ddPTM_KYSE-520_SHP099_60min_R1 2 SKVDEAVAVLQAHHAK 16 1 H0Y5F5;B1ANR0;Q13310-2;Q13310;Q13310-3;H0YER0;H0Y6X6 H0Y5F5 PABPC4 Polyadenylate-binding protein;Polyadenylate-binding protein 4 0 ; 84.14 0.013143 1351680000.0 2802640.0 2127950.0 1888930.0 1627670.0 2799210.0 2169740.0 1739510.0 2161660.0 2104030.0 1947920.0 False True 2647171.9722756753 2025720.0878819334 2010693.4501948596 1782363.2674231678 3019491.9016737673 2156197.8478358136 1915356.6467815929 2154161.7059952393 1721991.1902800263 1930662.9442588289 1.3711207231420244 1.0492354939041917 1.0414523447368251 0.9231871739825656 1.563966362255393 1.1168173368881673 0.9920719991427027 1.115762703376591 0.8919170461113757 1.0 20.880664889443764 -6.624025701988951 5.535112896641049 1.011489574598265 1.175504409569843 0.19950090039817836 0.17693652669810633 0.4174396042881116 19.23750467793481 0.07063691471006375 0.05421123748227659 2.3766996269626053e-07 6.624025701988951 0.16401483497157798 SKVDEAVAVLQAHQAK ddPTM_KYSE-520_SHP099_60min_R1 1 SKVDEAVAVLQAHQAK 16 1 P11940;P11940-2;E7ERJ7;E7EQV3;A0A087WTT1;Q9H361;H0YC10;H0YB75;H0YAS6;H0YAS7 P11940 PABPC1;PABPC3 Polyadenylate-binding protein 1;Polyadenylate-binding protein;Polyadenylate-binding protein 3 0 174.87 2.4108999999999998e-08 856380000.0 431760.0 387760.0 305740.0 322590.0 432800.0 394120.0 303360.0 352160.0 363910.0 309290.0 False True 407809.4121077784 369131.4275603736 325448.4896012963 353248.8566097797 466858.8977048546 391660.1508886086 334026.5893082899 350938.4391547619 297833.1174245635 306549.93122397916 1.3303196985870942 1.2041478074600174 1.0616492011655647 1.1523370930123622 1.5229456938411332 1.2776390107960718 1.089631917301704 1.1448002540843845 0.9715647830530852 1.0 18.22576255540763 -7.265121162557534 1.5628277143340652 1.0021326444227965 1.2486754764584063 0.4117690123844996 0.12130250021921299 0.47858622791183825 2.105883274168638 0.10566851366060373 0.040761082218925014 5.430987927981772e-08 7.265121162557534 0.24654283203560978 SKVGS(ph)TENIK ddPTM_KYSE-520_SHP099_60min_R1 9 SKVGSTENIK 10 1 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.007)KVGS(0.984)T(0.009)ENIK;SKVGS(0.753)T(0.247)ENIK;S(0.01)KVGS(0.667)T(0.322)ENIK;S(0.007)KVGS(0.858)T(0.135)ENIK;SKVGS(0.755)T(0.245)ENIK;SKVGS(0.72)T(0.28)ENIK;S(0.002)KVGS(0.944)T(0.054)ENIK;SKVGS(0.702)T(0.298)ENIK;SKVGS(0.5)T(0.5)ENIK 152.11 9.1295e-05 65541640000.0 25211300.0 22022800.0 20824090.0 19202930.0 19724020.0 16436160.0 16933040.0 18292250.0 22983370.0 17949750.0 True False 23812778.931519467 20964791.631103266 22166444.161122076 21027970.693628546 21276188.159677707 16333575.828756029 18644796.933744907 18228798.45419323 18810169.371608924 17790729.17969418 1.3384937003424615 1.178411037532507 1.2459547856207158 1.1819622726666683 1.1959143408220574 0.9180947932926041 1.048006337763015 1.0246234580985614 1.0573017655216912 1.0 24.084622307046505 -6.136751958396323 5.6284147531974025 1.0141696493096308 1.2275495529376796 0.8002790073207187 0.05473078819778386 0.10387985446649188 4.346736575154384 0.017854730733895572 0.017904499248659438 7.298742493511882e-07 6.136751958396323 0.21337990362804882 SKVGST(ph)ENIK ddPTM_KYSE-520_SHP099_60min_R1 1 SKVGSTENIK 10 1 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 SKVGS(0.333)T(0.667)ENIK 111.07 0.0018175 1880500000.0 1668600.0 1560500.0 1436400.0 1397400.0 1352700.0 1238400.0 1206500.0 1352300.0 1657800.0 1523500.0 True False 1576039.431728366 1485531.2376417452 1528992.642321261 1530208.475856369 1459149.7941898252 1230670.6862388449 1328464.7943052875 1347609.1869291938 1356785.3097371375 1510002.975265066 1.0437326664549837 0.9837935831755399 1.0125759136685553 1.013381099853632 0.966322462996264 0.8150120936171089 0.8797762759852105 0.8924546567152521 0.8985315472633207 1.0 20.526119961520838 -6.036378608835146 6.035564151431039 0.8890053986294398 1.0090711686787182 0.6002793766017196 0.04458828192317095 0.12461688747235948 13.174762464012122 0.014027357393764069 0.014433711446219561 9.196474927594727e-07 6.036378608835146 0.12006577004927832 SKVS(ph)SPIEK ddPTM_KYSE-520_SHP099_60min_R1 1 SKVSSPIEK 9 1 Q06190 Q06190 PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B subunit alpha 1 S(0.076)KVS(0.462)S(0.462)PIEK 80.245 0.016863 511140000.0 1428700.0 1402400.0 1328400.0 1231200.0 1356900.0 1556200.0 1369800.0 1485100.0 2131000.0 1538000.0 True False 1349447.1629571593 1335026.5989546855 1414030.78951515 1348212.8778262236 1463680.3102950938 1546487.1785569184 1508272.7519597053 1479948.5347249468 1744064.1181384008 1524374.5165458939 0.8852464721169012 0.8757864845312062 0.9276137682485184 0.8844367727172205 0.9601841899139536 1.0145060559403276 0.989437133452825 0.9708562552451923 1.144117865529729 1.0 20.539785964796177 -6.1549751197806035 0.760969976065911 1.0425480881044304 0.8793906417032062 0.6506221392127872 0.04525583799427695 0.42077670556785224 0.5386225221536232 0.02977653912697864 0.032566970136070794 6.998820902744813e-07 6.1549751197806035 -0.1631574464012242 SKVSS(ph)PIEK ddPTM_KYSE-520_SHP099_60min_R1 3 SKVSSPIEK 9 1 Q06190 Q06190 PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B subunit alpha 1 SKVS(0.217)S(0.783)PIEK;SKVS(0.091)S(0.909)PIEK;SKVS(0.018)S(0.981)PIEK 127.71 0.0004082 13963140000.0 18920100.0 18404500.0 16590400.0 16674300.0 18026500.0 20408900.0 18430800.0 19537600.0 25715700.0 20977300.0 True False 17870564.33671574 17520320.19428229 17659843.72957855 18259020.458688885 19445082.993245292 20281520.484802943 20293965.13127386 19469828.625710115 21046377.12004301 20791457.442092437 0.859514749578674 0.842669170407087 0.8493797887312163 0.8781981979639091 0.9352438638514392 0.975473727192538 0.9760722733264767 0.9364340465278458 1.0122607892525364 1.0 24.309487556163553 -5.817836984260725 1.7507355460270662 0.9769301266199009 0.8487914119883808 0.9037278928678266 0.019021642470910993 0.09925797590213159 0.6284199515760001 0.00667611230703222 0.008475489845834624 1.521118385951849e-06 5.817836984260725 -0.12813871463152005 SKWDEEWDK ddPTM_KYSE-520_SHP099_60min_R1 2 SKWDEEWDK 9 1 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 0 ; 97.214 0.0032604 774930000.0 1308330.0 1192040.0 771920.0 852440.0 1281610.0 1363540.0 1102280.0 1166400.0 1027340.0 1141320.0 False True 1235754.3268088042 1134772.6091114827 821679.1983156693 933455.641304569 1382465.4156365965 1355029.6410805176 1213709.2196161083 1162354.030639808 840800.9531338827 1131208.7927335235 1.0924193082186449 1.0031504496790087 0.7263727117344203 0.8251842164777632 1.2221133927857126 1.197859890927951 1.0729312107654552 1.02753270493153 0.7432765361575018 1.0 20.109433808501866 -4.2879136593533165 5.632834856660562 0.9848488866639155 1.094560296612575 0.041417764381500355 0.1619633916642832 0.6064697442358634 64.7399774467614 0.044449157429558434 0.22116386602630758 5.153310856637527e-05 4.2879136593533165 0.10971140994865947 SKWDEEWDKNK ddPTM_KYSE-520_SHP099_60min_R1 2 SKWDEEWDKNK 11 2 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 0 ; 158.58 1.5338e-05 7990100000.0 14648100.0 16197800.0 11963800.0 11100800.0 15588900.0 15448400.0 12963200.0 13898700.0 15801300.0 12326400.0 False True 13835540.692736594 15419633.37460654 12735005.69075682 12155816.694422767 16815657.741292067 15351980.805306999 14273646.764640125 13850488.653680965 12932182.238357726 12217197.6857941 1.1324643382683632 1.2621252247179535 1.0423835333011608 0.9949758534690237 1.376392375220789 1.2565877380504336 1.1683241224161593 1.1336878562410446 1.0585227947481766 1.0 23.54241006979045 -7.797075211545198 1.9368453441785132 1.0023818355409546 1.1776833375515507 0.24826007191853905 0.10332654350885132 0.48609709183019906 3.617973396703937 0.10390180131089982 0.030122799714923293 1.5956027952477398e-08 7.797075211545198 0.17530150201059613 SKYDEIFYNLAPADGKLS(ph)GSK ddPTM_KYSE-520_SHP099_60min_R1 4 SKYDEIFYNLAPADGKLSGSK 21 2 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 SKYDEIFYNLAPADGKLS(0.925)GS(0.075)K;SKYDEIFYNLAPADGKLS(0.73)GS(0.27)K;SKYDEIFYNLAPADGKLS(0.999)GS(0.001)K;SKYDEIFYNLAPADGKLS(0.983)GS(0.017)K 203.94 5.7201e-14 12787870000.0 7542200.0 6137810.0 5248820.0 5137640.0 4980610.0 4961550.0 4590210.0 4570370.0 6052870.0 4014700.0 True False 7123819.130997051 5842940.394559356 5587167.335608941 5625919.76091221 5372555.671205575 4930583.1260564765 5054233.222932516 4554516.453202375 4953821.388435651 3979132.881389338 1.7902943539070066 1.468395393852557 1.4041168018641659 1.4138557139483832 1.35018252251222 1.2391099450629388 1.2701845787989368 1.1446002405459097 1.2449499768165557 1.0 21.924022647325515 -1.0000000000000002 0.2060918288901863 1.0441159130382514 4.305748646273944 0.8906675128644764 0.06664442877054247 15.963054360779491 0.19630841937750285 0.11469925775772033 16.97465497894154 0.09999999999999995 1.0000000000000002 3.2616327332356927 SKYNDDIRK ddPTM_KYSE-520_SHP099_60min_R1 2 SKYNDDIRK 9 2 Q9Y3D6 Q9Y3D6 FIS1 Mitochondrial fission 1 protein 0 ; 55.567 0.036024 2329000000.0 7301400.0 7281500.0 4984100.0 4302400.0 7058500.0 6911700.0 4649300.0 5938000.0 6368300.0 4680800.0 False True 6896376.787019953 6931685.810245671 5305383.060841952 4711298.802436268 7613963.7926287325 6868561.516535065 5119296.616795343 5917402.463939614 5211977.251778874 4639331.753607299 1.486502184642798 1.4941129840210197 1.143566216560557 1.0155123739044984 1.6411768325704488 1.4805066508111722 1.1034556028063414 1.2754859488844603 1.1234327546690999 1.0 22.14548558476626 -13.240354352060802 0.08163922192201142 2.734085299962131e-06 1.648631409571823 0.2775831128046007 0.18654001380841634 316.793237967367 2.1158292304016597 58.98792951600585 6.949122048931286 5.749706125546727e-14 13.240354352060802 1.6486286754865231 SLAALDALNT(ph)DDENDEEEYEAWK ddPTM_KYSE-520_SHP099_60min_R1 13 SLAALDALNTDDENDEEEYEAWK 23 0 P55081 P55081 MFAP1 Microfibrillar-associated protein 1 1 SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK;SLAALDALNT(1)DDENDEEEYEAWK 273.93 1.1762e-37 13197105000.0 2894626.0 2670949.0 2344608.0 2334479.0 2394099.0 2498417.0 2369402.0 2482291.0 3158150.0 2219183.0 True False 2734055.325486126 2542632.6008638158 2495745.183185437 2556347.182273295 2582500.9707400505 2482823.45276227 2608924.2772951 2473680.511892074 2584709.5704827732 2199522.7651182506 1.2430220631697522 1.155992854989668 1.1346757682006812 1.1622281082123105 1.1741187732608942 1.1288009799838505 1.1861319731122852 1.1246441960599958 1.17512290005501 1.0 21.06875910258096 -13.908745580188613 0.2621895314929652 1.0305182959696664e-12 1.174996659413828 0.7089587093533702 0.031989439797104384 101.39176310682159 1.0416359623345621 54.60618916600263 0.04086222147470309 1.2338274263637435e-14 13.908745580188613 1.1749966594127974 SLADELALVDVLEDK ddPTM_KYSE-520_SHP099_60min_R1 6 SLADELALVDVLEDK 15 0 A0A5F9ZHM4;P07195;C9J7H8;A8MW50;A0A3B3IS95;F5H793 A0A5F9ZHM4 LDHB L-lactate dehydrogenase B chain;L-lactate dehydrogenase 0 ;;;;; 240.59 7.022300000000002e-18 1172711000.0 1462576.0 1735056.0 3730869.0 1036423.0 2018895.0 1790551.0 1482760.0 1356573.0 2525148.0 1814658.0 False True 1381443.9937070278 1651701.3053878506 3971366.785341463 1134924.3303080618 2177770.5505587826 1779375.5070378315 1632651.8511430654 1351867.3648895177 2066644.7770009122 1798581.5419025605 0.7680741526156886 0.9183355143524167 2.2080548992738493 0.6310107736942111 1.2108266986077882 0.9893215656798008 0.9077441378699056 0.7516297334284309 1.1490414689871615 1.0 20.778428137433384 SLAFDS(ph)EHS(ph)ADEKEKPCAK ddPTM_KYSE-520_SHP099_60min_R1 2 SLAFDSEHSADEKEKPCAK 19 2 Q96L73-2;Q96L73;Q96L73-3 Q96L73-2 NSD1 Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific 2 SLAFDS(1)EHS(1)ADEKEKPCAK;SLAFDS(1)EHS(1)ADEKEKPCAK 161.04 7.6014e-09 3460800000.0 5312300.0 5220700.0 4652600.0 4995400.0 4675500.0 4261800.0 4015100.0 4853300.0 6455300.0 4459400.0 True False 5017616.129192494 4969889.7355695395 4952514.040423203 5470161.314078224 5043435.250044012 4235200.52536556 4420985.4915998075 4836465.035068738 5283180.244870393 4419893.185360704 1.1352347033660295 1.1244366158056716 1.120505368054281 1.2376229661377685 1.1410762745915595 0.9582133204922528 1.0002471340806882 1.0942493024690683 1.1953185344770356 1.0 22.075580074051185 -6.033719064882773 24.060717219500752 1.0521039032685455 1.1548150113583477 0.3637231080929447 0.06771011181672212 484.83795631710916 345961.844541032 0.02375223654540939 0.023769531460284075 9.25296533442568e-07 6.033719064882773 0.10271110808980222 SLAPDRS(ph)DDEHDPLDNTSRPR ddPTM_KYSE-520_SHP099_60min_R1 6 SLAPDRSDDEHDPLDNTSRPR 21 2 Q92614;Q92614-2;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 SLAPDRS(0.545)DDEHDPLDNT(0.183)S(0.271)RPR;SLAPDRS(1)DDEHDPLDNTSRPR;SLAPDRS(1)DDEHDPLDNTSRPR;SLAPDRS(1)DDEHDPLDNTSRPR;S(0.03)LAPDRS(0.968)DDEHDPLDNT(0.001)S(0.001)RPR;SLAPDRS(1)DDEHDPLDNTSRPR 202.33 6.722699999999999e-14 12608100000.0 4247960.0 4330800.0 3856800.0 4380650.0 4107010.0 3768820.0 3686840.0 3802100.0 5148470.0 3454000.0 True False 4012317.1907016826 4122741.867336675 4105415.4990981882 4796985.658909554 4430208.321309643 3745297.396407207 4059541.7672909335 3788911.402516809 4213637.630366966 3423400.247171333 1.1720269033739061 1.204282750970527 1.1992215933530959 1.4012342444834427 1.2940959284472242 1.0940284880512727 1.18582154413444 1.106768455031657 1.2308340615002835 1.0 21.706998544363273 -6.260743342033782 24.99996878656192 1.134059227856303 1.2565179356950773 0.38288225163167333 0.08238256478652879 77.01706183776218 2766320.4422354493 0.028807992250881664 0.027163835701393548 5.486010796536521e-07 6.260743342033782 0.12245870783877422 SLAPDRSDDEHDPLDNT(ph)SRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SLAPDRSDDEHDPLDNTSRPR 21 2 Q92614;Q92614-2;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 SLAPDRS(0.081)DDEHDPLDNT(0.563)S(0.356)RPR 129.29 7.5164e-05 978290000.0 595530.0 625330.0 597380.0 570450.0 558050.0 622120.0 539280.0 632510.0 791810.0 578210.0 True False 562494.763740378 595288.2081605335 635888.0706417942 624665.3964879541 601965.3601298385 618237.1183163029 593795.6852656079 630315.9704389441 648037.263905757 573087.5092405727 0.9815163560025384 1.038738759023696 1.109582847974547 1.0900000199196975 1.0503899499180034 1.0787830974288033 1.0361344047656469 1.0998598997109668 1.130782390920549 1.0 19.128395926696353 -4.4231995065258465 3.4033075200784104 1.0765109562757684 0.9821255770933806 0.3814421022892174 0.03617738199247985 0.2579669891797319 5.048771067092984 0.009029578396647258 0.048463175532803056 3.773987813618325e-05 4.4231995065258465 -0.09438537918238787 SLAQVEEPAIENVKPPGS(ph)PVAK ddPTM_KYSE-520_SHP099_60min_R1 5 SLAQVEEPAIENVKPPGSPVAK 22 1 Q9NXL9-4;Q9NXL9 Q9NXL9-4 MCM9 DNA helicase MCM9 1 SLAQVEEPAIENVKPPGS(1)PVAK;SLAQVEEPAIENVKPPGS(1)PVAK;SLAQVEEPAIENVKPPGS(1)PVAK;SLAQVEEPAIENVKPPGS(1)PVAK;SLAQVEEPAIENVKPPGS(1)PVAK 246.31 2.6236000000000004e-27 2988770000.0 1544563.0 1719490.0 1203675.0 1063734.0 1272632.0 1758471.0 1380572.0 1888748.0 2096090.0 1872161.0 True False 1458883.011379997 1636883.1193928903 1281265.8164480939 1164830.95953671 1372780.8981144277 1747495.7302173043 1520133.690844295 1882196.374025095 1715492.8941289186 1855575.1100592175 0.7862160919659238 0.8821432829742213 0.6904952591259992 0.6277465963097212 0.7398142444746512 0.9417542414446031 0.8192250923196435 1.0143466377736807 0.9245073857851928 1.0 20.823434969021324 -6.260525521058438 24.70931476216585 0.933316994366311 0.7433128571090019 0.6059971393089258 0.07839021663168955 55.11169512142078 1490147.7280147912 0.0286666369848098 0.027106465100707102 5.488763002680776e-07 6.260525521058438 -0.19000413725730914 SLAS(ph)IEAK ddPTM_KYSE-520_SHP099_60min_R1 8 SLASIEAK 8 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7 P28290-3 SSFA2 Sperm-specific antigen 2 1 SLAS(1)IEAK;S(0.003)LAS(0.997)IEAK;SLAS(1)IEAK;SLAS(1)IEAK;SLAS(1)IEAK;SLAS(1)IEAK;S(0.002)LAS(0.998)IEAK;SLAS(1)IEAK 175.65 7.9434e-05 14496580000.0 19218300.0 18116800.0 15806700.0 14273700.0 13993000.0 18185800.0 16321000.0 19576000.0 20594600.0 17452900.0 True False 18152222.58826878 17246441.73412881 16825625.17361423 15630268.156455617 15094169.49072096 18072295.676520027 17970885.957610127 19508095.42507276 16855139.787617594 17298280.884150717 1.0493656976573014 0.9970032195471283 0.9726761454677527 0.9035734973396465 0.8725820555122769 1.0447451858108334 1.0388827697945218 1.1277476389545016 0.9743823620681784 1.0 24.044125333105534 -6.435158957639356 24.8085898349428 1.0453154861044476 0.9588086937528283 0.3033853716805187 0.05853127375531912 83.73176370966152 23678.567700592037 0.02166559127974038 0.019107248478113816 3.6714789481981724e-07 6.435158957639356 -0.08650679235161929 SLATMDS(ph)PPHQK ddPTM_KYSE-520_SHP099_60min_R1 1 SLATMDSPPHQK 12 0 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 SLATMDS(1)PPHQK 149.35 1.3292e-05 556060000.0 259210.0 275340.0 255660.0 215160.0 225350.0 259490.0 214140.0 250190.0 297060.0 291730.0 True False 244831.10457767587 262112.2531062342 272140.2526704628 235608.74170978743 243083.7629338933 257870.42665707157 235787.36100500185 249322.14928478468 243121.39227320216 289145.4991625054 0.8467401543057602 0.9065064262297994 0.9411879260050827 0.8148449219933067 0.8406970319025284 0.8918362118863327 0.8154626708281728 0.862272281626147 0.8408271717090198 1.0 18.1414361197487 -10.248606320803626 3.371243032307643 1.0003995304595148 0.8633509368677331 0.5376084962579475 0.038309430563472587 13689043.193291865 21334781.32205169 57263.24876177016 0.009897728832062592 5.6414881364522375e-11 10.248606320803626 -0.13704859359178168 SLCLS(ph)PSEASQMK ddPTM_KYSE-520_SHP099_60min_R1 2 SLCLSPSEASQMK 13 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 SLCLS(0.999)PS(0.001)EASQMK;SLCLS(0.763)PS(0.237)EASQMK 212.39 3.4618e-11 832390000.0 1013980.0 1061370.0 701770.0 634560.0 589670.0 922160.0 717370.0 927480.0 839420.0 848610.0 True False 957732.508080983 1010380.1920511494 747007.2170717004 694868.3916125784 636073.6742366481 916404.4573821174 789888.7604565144 924262.7883554584 687002.4880561878 841091.9756085895 1.138677500029644 1.2012719433211427 0.8881397501518046 0.8261503043228917 0.7562474648226241 1.08954131528723 0.9391229299090318 1.0988843255658087 0.8167982907684893 1.0 19.681904046021845 -4.760364885581613 24.9986920471795 0.9269499699148218 1.1699747913384453 0.4482967098895282 0.10787977963238599 24.990563680697925 581344.2390617434 0.028840679321591352 0.068033794315455 1.7363413762611043e-05 4.760364885581613 0.24302482142362347 SLDLLAALPT(ph)PPHNQTEDVR ddPTM_KYSE-520_SHP099_60min_R1 5 SLDLLAALPTPPHNQTEDVR 20 0 O14686-3;O14686 O14686-3 KMT2D Histone-lysine N-methyltransferase 2D 1 SLDLLAALPT(1)PPHNQTEDVR;SLDLLAALPT(1)PPHNQTEDVR;SLDLLAALPT(0.998)PPHNQT(0.002)EDVR;SLDLLAALPT(0.998)PPHNQT(0.002)EDVR;SLDLLAALPT(0.999)PPHNQT(0.001)EDVR 170.55 6.9906e-09 1134690000.0 752772.0 959330.0 728252.0 653341.0 662630.0 866489.0 625377.0 941100.0 1033460.0 985070.0 True False 711014.2365462211 913242.3468163128 775196.2891643984 715434.3322058655 714775.2111510333 861080.9207432262 688596.210251353 937835.5437543922 845809.7154065288 976343.0461728638 0.7282422293407048 0.9353703602397769 0.7939794237313061 0.7327694246507659 0.7320943329835328 0.8819450541677436 0.7052810105531652 0.9605594544157241 0.8663038249946999 1.0 19.897028614086317 -7.277571699902503 24.964653085017055 0.9350737459845665 0.7925078486653168 0.4685254424579095 0.07547329990447205 802.0937794412142 1241227.559689866 0.04033870522218839 0.019474225335226615 5.2775007062413596e-08 7.277571699902503 -0.14256589731924973 SLDNFFAK ddPTM_KYSE-520_SHP099_60min_R1 2 SLDNFFAK 8 0 Q9UKY7-2;Q9UKY7 Q9UKY7-2 CDV3 Protein CDV3 homolog 0 ; 140.5 0.0046662 570270000.0 907410.0 998400.0 714410.0 579380.0 1076190.0 976350.0 767020.0 849290.0 823690.0 827820.0 False True 857074.1584230112 950435.3653710468 760462.0116964155 634444.101003052 1160880.0303165128 970256.2374913575 844557.8669938183 846344.0112157768 674128.6595351564 820486.1588342137 1.0445930735026456 1.1583807418780485 0.9268431935243326 0.7732538741476159 1.4148685115736104 1.1825382147456873 1.0293383476374627 1.0315152816450959 0.8216210014962237 1.0 19.64611947088187 -7.588263524189827 5.94011306318029 0.9114409177869998 1.0755588852306417 0.13696419013625571 0.16311312322392943 0.4331916462472554 28.426806970130354 0.11969213654332876 0.04385937021235075 2.5806937843385028e-08 7.588263524189827 0.16411796744364193 SLDNNY(ph)STPNER ddPTM_KYSE-520_SHP099_60min_R1 2 SLDNNYSTPNER 12 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;C9JZR2;O60716;O60716-17;O60716-18;O60716-10;O60716-9;O60716-27;O60716-29;O60716-26;O60716-25;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 SLDNNY(0.962)S(0.038)TPNER;SLDNNY(0.962)S(0.038)TPNER 267.07 1.6674e-25 925870000.0 1107570.0 1098090.0 905960.0 939810.0 974680.0 777000.0 705590.0 1003000.0 1000840.0 798540.0 True False 1046130.8842139437 1045336.108133306 964359.6311872507 1029129.2598358205 1051381.7708294068 772150.4547864847 776917.9230947933 999520.8271019591 819112.6851232462 791465.5568547195 1.3217642576529331 1.3207600748761157 1.2184480080467575 1.3002830646548607 1.328398641891118 0.9755957768459401 0.9816193722721954 1.262873435799342 1.0349315621243156 1.0 19.594167042694274 -6.253191497988563 24.99808752752068 1.0630970768100818 1.294914080162203 0.692421779452534 0.08207696931369242 394.23880968181345 1194879.273581971 0.028340670640666893 0.027884517861761042 5.582239969413339e-07 6.253191497988563 0.2318170033521212 SLDS(ph)DES(ph)EDEEDDYQQKR ddPTM_KYSE-520_SHP099_60min_R1 2 SLDSDESEDEEDDYQQKR 18 1 Q13442 Q13442 PDAP1 28 kDa heat- and acid-stable phosphoprotein 2 SLDS(1)DES(1)EDEEDDYQQKR;S(0.188)LDS(0.826)DES(0.986)EDEEDDYQQKR 141.22 2.7039e-06 8866700000.0 7349800.0 6979700.0 6685200.0 6119900.0 6769000.0 6644400.0 6053700.0 6379000.0 9098700.0 6542000.0 True False 6942091.942536945 6644384.7352567045 7116138.68869819 6701533.455984971 7301681.789658406 6602929.834984963 6665667.074418499 6356872.737869792 7446605.439561648 6484042.969598983 1.0706424949812279 1.0247286710482175 1.0974848134200905 1.033542419044061 1.1261001544704432 1.0183352988164007 1.0280109347934732 0.9803872009600428 1.1484509702473789 1.0 22.62846222091713 SLDS(ph)PTSSPGAGTR ddPTM_KYSE-520_SHP099_60min_R1 1 SLDSPTSSPGAGTR 14 0 Q9P107;K7EJC2 Q9P107 GMIP GEM-interacting protein 1 SLDS(0.932)PT(0.051)S(0.017)SPGAGTR 237.1 2.8356e-17 0.0 246720.0 256610.0 227870.0 176230.0 236540.0 241560.0 220360.0 240400.0 291000.0 269100.0 True False 233033.94977587316 244282.07042053746 242558.86480489094 192978.84621451836 255154.3522715023 240052.33443786774 242636.1393063519 239566.108509782 238161.7355130335 266715.983356632 0.8737157287805964 0.9158883818893686 0.9094275556803058 0.7235368641424161 0.9566519001237719 0.900029804801343 0.909717281479594 0.8982067947141087 0.8929413697512909 1.0 18.024944757587406 SLDSEPSVPSAAKPPS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 10 SLDSEPSVPSAAKPPSPEK 19 1 Q7Z3K3-5;Q7Z3K3-7;Q7Z3K3-2;Q7Z3K3-3;Q7Z3K3-6;Q7Z3K3 Q7Z3K3-5 POGZ Pogo transposable element with ZNF domain 1 SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPS(0.001)AAKPPS(0.999)PEK;SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPSAAKPPS(1)PEK;SLDSEPSVPSAAKPPS(1)PEK 245.41 1.9038e-26 38977070000.0 20020140.0 23576670.0 17678460.0 15977260.0 16458850.0 23096180.0 17905320.0 22789380.0 24468230.0 23221870.0 True False 18909582.925040353 22444011.38389685 18818041.818136096 17495733.986661606 17754067.856953662 22952028.173527032 19715364.48468328 22710328.959861256 20025416.22588344 23016142.29814148 0.8215791630106177 0.9751421890413482 0.8176019062784308 0.7601505830138338 0.771374612955329 0.9972143844183817 0.8565885728936976 0.9867130931709213 0.8700596288675388 1.0 24.456142709943798 -6.261490751934223 24.999999999000593 0.935939293297754 0.8328022251338625 0.3840254294613873 0.07123366398879839 5.837847806730119 2840484.0872664303 0.025092030464406927 0.023569280722998968 5.476577629131748e-07 6.261490751934223 -0.10313706816389157 SLDSESIS(ph)PGDFHR ddPTM_KYSE-520_SHP099_60min_R1 2 SLDSESISPGDFHR 14 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 SLDSES(0.012)IS(0.988)PGDFHR;SLDSES(0.001)IS(0.999)PGDFHR 226.88 1.6305e-14 437550000.0 549490.0 486950.0 559640.0 598500.0 535780.0 549000.0 592790.0 613110.0 699140.0 591570.0 True False 519008.69431884214 463556.1910731489 595715.2898556596 655381.2600544131 577942.8378288057 545573.4873587901 652714.998272881 610983.2645109504 572193.7998851633 586329.150034495 0.8851831676598506 0.7906074447191938 1.016008311748806 1.1177702149310769 0.9856969209100451 0.9304901305464565 1.1132228343661241 1.0420482496478385 0.9758917833976016 1.0 19.161351258213315 -4.772733795781523 24.236635505535038 1.0261648238775989 0.8378953282015597 0.6103358244945406 0.058992919080840006 82.69160652756969 177449.18969986495 0.015643214913401614 0.03306838753823222 1.687587128229015e-05 4.772733795781523 -0.18826949567603923 SLEETLHTVDLS(ph)S(ph)DDDLPHDEEALEDS(ph)AEEKVEESR ddPTM_KYSE-520_SHP099_60min_R1 2 SLEETLHTVDLSSDDDLPHDEEALEDSAEEKVEESR 36 1 O95810 O95810 SDPR Serum deprivation-response protein 3 SLEETLHTVDLS(1)S(1)DDDLPHDEEALEDS(0.971)AEEKVEES(0.029)R;SLEET(0.001)LHT(0.005)VDLS(0.996)S(0.998)DDDLPHDEEALEDS(0.968)AEEKVEES(0.032)R 151.77 6.8419e-07 1807640000.0 299010.0 243310.0 282440.0 336870.0 295010.0 310760.0 251840.0 292990.0 382880.0 312270.0 True False 282423.31923834275 231621.02238424445 300646.53431997844 368886.02351634135 318225.6086227102 308820.4315694309 277298.44492154475 291973.68607437983 313358.64361934783 309503.530742384 0.9125043535397289 0.7483631021225239 0.9713832136222778 1.1918637006547899 1.0281808671436 0.9977929196112413 0.8959459824461736 0.9433614064887835 1.012455796118761 1.0 18.239596341890806 -4.901286059592127 6.704089280442703 1.0088345295597703 0.8327455577681592 0.4357330152697606 0.08045218685226481 0.2016873155820955 11.709253064925768 0.022712901192707344 0.04802349596155124 1.2552029186160051e-05 4.901286059592127 -0.1760889717916111 SLEETLHTVDLS(ph)S(ph)DDDLPHDEEALEDSAEEKVEESR ddPTM_KYSE-520_SHP099_60min_R1 1 SLEETLHTVDLSSDDDLPHDEEALEDSAEEKVEESR 36 1 O95810 O95810 SDPR Serum deprivation-response protein 2 SLEET(0.001)LHT(0.028)VDLS(0.977)S(0.994)DDDLPHDEEALEDSAEEKVEESR 78.58800000000001 0.010397 147050000.0 16751.0 16738.0 16969.0 18778.0 18755.0 16194.0 16280.0 16063.0 23160.0 17989.0 True False 15821.788637709375 15933.881355749798 18062.84889135997 20562.655474188432 20230.911798647267 16092.927239140701 17925.741277488676 16007.281202132386 18954.727816088867 17829.63145523022 0.8873873067672491 0.8936741847838747 1.0130803284810093 1.1532855026095614 1.1346791911793916 0.9025944972306162 1.0053904547886918 0.8977909185799093 1.063102614525922 1.0 14.121989261805298 -4.766565979570347 6.01389165251704 1.0219392222755468 0.8890368300429526 0.30628641801964673 0.07879470033097866 0.18790784690933007 25.45745062326338 0.02234822019550095 0.05301371631017191 1.7117251055502283e-05 4.766565979570347 -0.13290239223259415 SLENET(ph)LNKEEDCHS(ph)PTSKPPKPDQPLK ddPTM_KYSE-520_SHP099_60min_R1 1 SLENETLNKEEDCHSPTSKPPKPDQPLK 28 3 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.318)LENET(0.683)LNKEEDCHS(0.811)PT(0.151)S(0.037)KPPKPDQPLK 54.375 0.033742 1101300000.0 453980.0 402790.0 521430.0 665610.0 505330.0 406140.0 430780.0 546280.0 509200.0 495510.0 True False 428796.8244133072 383439.363799884 555042.2121174976 728869.3742770569 545096.5960656051 403605.1296100162 474327.4464076516 544385.0821827109 416742.11588741146 491120.1669009468 0.8730996063938675 0.7807444891124156 1.1301556106317319 1.484095794469913 1.1099047296413398 0.8218052460700899 0.9658073082209998 1.1084559724310954 0.8485542724036895 1.0 18.905716539671356 -6.21668355237343 24.95544794901687 0.9567580725292975 1.0849442875391546 0.10001789285336582 0.18822567798799436 1238.3156969973393 690473.8820356233 0.06962040794723476 0.0696200988735106 6.071785876569715e-07 6.21668355237343 0.12818621500985716 SLENETLNKEEDCHS(ph)PTSKPPKPDQPLK ddPTM_KYSE-520_SHP099_60min_R1 16 SLENETLNKEEDCHSPTSKPPKPDQPLK 28 3 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SLENETLNKEEDCHS(0.779)PT(0.179)S(0.042)KPPKPDQPLK;SLENETLNKEEDCHS(0.821)PT(0.151)S(0.028)KPPKPDQPLK;SLENETLNKEEDCHS(0.962)PT(0.019)S(0.019)KPPKPDQPLK;SLENETLNKEEDCHS(0.614)PT(0.385)S(0.002)KPPKPDQPLK;SLENETLNKEEDCHS(0.978)PT(0.019)S(0.004)KPPKPDQPLK;SLENETLNKEEDCHS(0.89)PT(0.099)S(0.011)KPPKPDQPLK;SLENET(0.002)LNKEEDCHS(0.939)PT(0.03)S(0.03)KPPKPDQPLK;SLENETLNKEEDCHS(0.973)PT(0.023)S(0.004)KPPKPDQPLK;SLENETLNKEEDCHS(0.38)PT(0.38)S(0.24)KPPKPDQPLK;SLENETLNKEEDCHS(0.966)PT(0.03)S(0.005)KPPKPDQPLK;SLENETLNKEEDCHS(0.983)PT(0.015)S(0.002)KPPKPDQPLK;SLENETLNKEEDCHS(0.764)PT(0.118)S(0.118)KPPKPDQPLK;S(0.154)LENET(0.36)LNKEEDCHS(0.468)PT(0.014)S(0.004)KPPKPDQPLK;S(0.012)LENET(0.332)LNKEEDCHS(0.529)PT(0.102)S(0.024)KPPKPDQPLK;SLENETLNKEEDCHS(0.977)PT(0.018)S(0.006)KPPKPDQPLK;SLENETLNKEEDCHS(0.953)PT(0.021)S(0.026)KPPKPDQPLK 326.78 4.3266e-65 198947410000.0 41168020.0 39343200.0 35867220.0 47251580.0 35982760.0 34250750.0 35998960.0 37811590.0 43699160.0 31249420.0 True False 38884347.864186734 37453093.616652854 38179278.39078111 51742355.956494436 38814398.498101465 34036978.36457936 39638086.19279265 37680430.41958148 35764494.11017782 30972574.45048087 1.2554444877146151 1.2092341137651659 1.2326801716732447 1.670586216177167 1.253186058529237 1.09893927025659 1.279780156995546 1.2165740526292113 1.1547149290853527 1.0 24.884487969490078 -5.998440783666921 24.999996951741263 1.172139130942257 1.3418450685764043 0.2914208936262609 0.13924553785413127 78.4282420246299 1257451.5545081159 0.044992534546675865 0.050649941988047134 1.0035966808746492e-06 5.998440783666921 0.1697059376341472 SLENPTPPFT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SLENPTPPFTPK 12 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 SLENPTPPFT(1)PK 143.38 0.00014346 245090000.0 329890.0 410380.0 258610.0 289250.0 233960.0 401430.0 302230.0 416410.0 402040.0 352230.0 True False 311590.3440805886 390664.72880706214 275280.4143906299 316740.2330338163 252371.32094969435 398924.52646710246 332782.35788055294 414965.57090082456 329039.67060364306 349109.5162307932 0.8925289331689228 1.1190320247494976 0.7885216575094575 0.907280432952799 0.7229001479949745 1.1426916423652485 0.9532319871239301 1.1886401017682213 0.9425113189584836 1.0 18.41332015768627 -6.281212148774153 24.984939901973384 1.0514435710989238 0.8947568504685633 0.306201392068724 0.11941068693300991 1064.8017351716994 1345482.8524918791 0.041318959340332605 0.03648813714611009 5.233447251531777e-07 6.281212148774153 -0.1566867206303605 SLENYHFVDEHGK ddPTM_KYSE-520_SHP099_60min_R1 2 SLENYHFVDEHGK 13 0 Q14677;Q14677-2;Q14677-3 Q14677 CLINT1 Clathrin interactor 1 0 ; 179.56 2.2997e-07 1133120000.0 1083920.0 1083440.0 656850.0 854780.0 1112170.0 1084350.0 898270.0 928440.0 770620.0 831630.0 False True 1023792.7968590505 1031389.9161234046 699191.6019971586 936018.0342010214 1199691.4516183177 1077582.1694307895 989075.8978703786 925219.4583395245 630694.833749326 824262.4051983501 1.2420714452125055 1.2512883150059615 0.8482633656316103 1.135582586683398 1.4554727281655222 1.3073290285166903 1.1999526990829672 1.1224816909087103 0.7651626833539203 1.0 19.65274416914226 -7.611811877259029 5.326506466632642 0.8872338301700521 1.2018296545977576 0.4053985727800007 0.15401548137584548 0.22365933805902835 10.190948777011847 0.11919520462836129 0.04274535929624296 2.444489199401848e-08 7.611811877259029 0.3145958244277055 SLEQYDQVLDGAHGAS(ph)LTDLANLSEGVSLAER ddPTM_KYSE-520_SHP099_60min_R1 5 SLEQYDQVLDGAHGASLTDLANLSEGVSLAER 32 0 Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;M0R2S2;M0R3I1 Q9UBC2-3 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 SLEQYDQVLDGAHGAS(0.8)LT(0.199)DLANLS(0.001)EGVSLAER;SLEQYDQVLDGAHGAS(0.997)LT(0.003)DLANLSEGVSLAER;SLEQYDQVLDGAHGAS(1)LTDLANLSEGVSLAER;SLEQYDQVLDGAHGAS(0.996)LT(0.004)DLANLSEGVSLAER;S(0.001)LEQYDQVLDGAHGAS(0.968)LT(0.03)DLANLSEGVSLAER 288.0 1.1637e-53 1028156000.0 343159.0 468178.0 332942.0 313894.6 294146.0 396972.0 290791.5 401394.0 509358.0 375889.5 True False 324123.286199493 445686.0261304955 354403.9740460348 343727.0484081471 317293.61673819757 394494.35049871315 320187.54267155094 400001.6579000635 416871.42707026785 372559.4114676054 0.8699908691681945 1.196281753760631 0.9512683430810357 0.9226100262884775 0.8516591098539105 1.0588763519480033 0.8594267996351281 1.073658712108107 1.1189394610328223 1.0 18.507110982683002 -7.347561551063412 24.9986878918009 1.072225386536884 0.9658083922855137 0.17912017284716408 0.1023650356977436 143.7685248914055 41728.38447198525 0.05536326273207692 0.02659565299242556 4.4919865677782206e-08 7.347561551063412 -0.1064169942513703 SLES(ph)LIYMSTR ddPTM_KYSE-520_SHP099_60min_R1 1 SLESLIYMSTR 11 0 O95171-3;O95171-2;O95171;F2Z2X8 O95171-3 SCEL Sciellin 1 S(0.112)LES(0.888)LIYMSTR 237.92 3.5752e-14 200010000.0 85488.0 44933.0 58555.0 55338.0 52098.0 52626.0 40638.0 54528.0 68317.0 54150.0 True False 80745.81022389696 42774.35123419199 62329.54899131254 60597.30688202364 56197.8162029286 52297.541613376445 44746.08562866 54338.85509493084 55912.354931422415 53670.27312806251 1.5044792120067951 0.7969840423977016 1.1613421240206503 1.1290664897015252 1.0470939111644753 0.9744228707126086 0.833721966010709 1.0124572119331876 1.0417751144662537 1.0 15.711835609555315 -6.02628137979838 2.7476850174483762 0.9649582679771059 1.1236504753669827 0.18994709890599792 0.16734024324076477 0.5169448955259712 7.832899503430488 0.05602717600265014 0.05994476215543269 9.412795430264855e-07 6.02628137979838 0.15869220738987677 SLES(ph)VLSLGPR ddPTM_KYSE-520_SHP099_60min_R1 1 SLESVLSLGPR 11 0 Q13470-2;Q13470 Q13470-2 TNK1 Non-receptor tyrosine-protein kinase TNK1 1 S(0.481)LES(0.519)VLSLGPR 277.28 4.4028e-15 0.0 85358.0 58474.0 72351.0 71355.0 96496.0 64817.0 75708.0 104290.0 86609.0 77235.0 True False 80623.02158304554 55664.8212687366 77014.8612256931 78136.55774633707 104089.68621286424 64412.45306035467 83361.30347887671 103928.24233146888 70882.98883521759 76550.75798792065 1.0531969075442398 0.7271622480540331 1.0060626863792215 1.0207156636994588 1.3597472964185293 0.8414345560173114 1.0889677080928544 1.3576383181975582 0.9259606396895848 1.0 16.224129042578237 -5.150182342107748 2.8996711236270922 1.1029975019141733 0.8893769306084024 0.1542038741012154 0.17427529517682833 0.41978719140034415 6.784672742999321 0.04818859749001779 0.09393371933253085 7.0764860991780484e-06 5.150182342107748 -0.21362057130577095 SLESLADGGS(ph)ASPIKDQPVMAVK ddPTM_KYSE-520_SHP099_60min_R1 2 SLESLADGGSASPIKDQPVMAVK 23 1 A0A3B3ITU7;Q9HB96 A0A3B3ITU7 FANCE Fanconi anemia group E protein 1 SLESLADGGS(0.832)AS(0.168)PIKDQPVMAVK;SLESLADGGS(0.541)AS(0.459)PIKDQPVMAVK 153.77 1.6804000000000001e-07 1158980000.0 1005900.0 1319290.0 788590.0 652900.0 829970.0 1159590.0 769620.0 958510.0 1333160.0 1105030.0 True False 950100.7217880648 1255909.3281053382 839423.7731886116 714951.4196984577 895283.9171166762 1152352.5686819297 847420.7003673731 955185.1525279155 1091091.7502287147 1095240.29390033 0.867481526272742 1.1466975193478677 0.7664288630208135 0.6527804205891646 0.8174315007425663 1.052145885336462 0.7737303905698805 0.8721238232811402 0.9962122068602481 1.0 20.062815998772614 -7.760995064578703 6.983894246147777 0.9994948205588873 0.8683331718997347 0.1300286490942214 0.13403893209037554 0.28494797537955435 75.61778533016032 0.11441729371057689 0.03597736169999928 1.7338237012091778e-08 7.760995064578703 -0.13116164865915259 SLESLADGGSAS(ph)PIKDQPVMAVK ddPTM_KYSE-520_SHP099_60min_R1 2 SLESLADGGSASPIKDQPVMAVK 23 1 A0A3B3ITU7;Q9HB96 A0A3B3ITU7 FANCE Fanconi anemia group E protein 1 SLESLADGGS(0.004)AS(0.996)PIKDQPVMAVK;SLESLADGGSAS(1)PIKDQPVMAVK 254.55 2.4324999999999999e-29 1572610000.0 1259580.0 1360790.0 846120.0 844540.0 950060.0 1440170.0 1010980.0 1226960.0 1261300.0 1254180.0 True False 1189708.5864895203 1295415.6058125661 900662.249039867 924804.8276797895 1024824.3168980456 1431181.3648260636 1113179.724613974 1222703.9621346155 1032279.7147855303 1243068.9409372741 0.9570736966466878 1.0421108300202744 0.7245473033545248 0.7439690569233325 0.8244307963525562 1.1513290354973817 0.8955092416472383 0.9836171767051766 0.8304283702939206 1.0 20.24547488018779 SLETENRR ddPTM_KYSE-520_SHP099_60min_R1 4 SLETENRR 8 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;;; 102.07 0.0057867 3307500000.0 1103290.0 1197100.0 1248640.0 666990.0 1038520.0 1203100.0 803360.0 833920.0 889930.0 1077140.0 False True 1042088.3043459113 1139589.519116267 1329129.3322946376 730380.5290621441 1120245.6156294958 1195591.006632714 884571.4688380416 831027.3261583907 728341.1453096702 1067597.3776022387 0.9761060922483537 1.0674337938855925 1.244972458886874 0.6841348099810212 1.0493146940333462 1.1198894187225727 0.828562796608528 0.7784089241815388 0.6822245544902723 1.0 20.0259362361504 -6.860794937366493 6.701222717496538 0.7996692548522564 1.0209858011148474 0.29124941953628636 0.15265783998200103 0.2711309530488783 15.741250916708939 0.06458970738655062 0.04344156545171818 1.377859905169774e-07 6.860794937366493 0.221316546262591 SLFFS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 2 SLFFSSK 7 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 SLFFS(0.62)S(0.38)K;SLFFS(0.609)S(0.391)K 99.68799999999999 0.0082402 236780000.0 1354020.0 1110560.0 946300.0 1193890.0 1179190.0 1222290.0 1268240.0 1292140.0 1226290.0 1197700.0 True False 1278909.8114280475 1057207.0306154557 1007300.0121335345 1307356.9466438836 1271985.5443266802 1214661.2347245456 1396446.076029621 1287657.8679277445 1003626.6482552502 1187089.3097964986 1.0773492785031393 0.8905876094501193 0.8485461067004426 1.1013130485253906 1.071516299430525 1.0232264958504038 1.1763614283318011 1.0847186115663752 0.8454516774540752 1.0 20.178997048494004 -5.2725912487292925 24.97575063994915 1.0526493966100212 0.9340036556987239 0.188815995468406 0.09765331341901559 1045.1371672536607 2340689.7472536014 0.027743253434018983 0.04156669032480166 5.33837098364386e-06 5.2725912487292925 -0.11864574091129731 SLFFSS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 SLFFSSK 7 0 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 SLFFS(0.015)S(0.985)K;SLFFS(0.034)S(0.966)K 154.85 0.0011949000000000003 3735900000.0 11026000.0 8605500.0 7188200.0 9154800.0 9603000.0 9949200.0 10086800.0 10061300.0 9765500.0 9777400.0 True False 10414365.80021394 8192078.862881159 7651562.87352664 10024869.43950901 10358701.466404147 9887103.352331648 11106472.181681389 10026399.69862507 7992331.368221747 9690779.842702087 1.0746674642553942 0.8453477424781695 0.7895714274521326 1.0344749960508615 1.0689234132385184 1.0202587937004273 1.146086523681108 1.0346329048199077 0.824735624784686 1.0 23.208181337124373 -5.298749820262806 24.04982934976286 1.0273849720533352 0.8974107289066595 0.2082375148269977 0.10175736216173221 492.4526436541133 317427.3821182812 0.029206463530828224 0.043321653511468466 5.02632052427551e-06 5.298749820262806 -0.12997424314667572 SLGDDISSETSGDFRK ddPTM_KYSE-520_SHP099_60min_R1 4 SLGDDISSETSGDFRK 16 1 P12429;D6RA82;D6RFG5 P12429 ANXA3 Annexin A3;Annexin 0 ;;; 140.77 3.9770999999999996e-05 2127130000.0 1361070.0 1397170.0 1194890.0 904390.0 1232170.0 1263030.0 1230670.0 1399970.0 1472300.0 1353360.0 False True 1285568.7338742216 1330047.8560050745 1271914.5212915961 990342.9536852307 1329134.768911715 1255146.9612728104 1355078.1337817574 1395113.8308254534 1204967.4336626795 1341370.2832981485 0.9583995932228925 0.9915590590949767 0.9482202916887533 0.7383069134722329 0.9908783469122716 0.9357199700195139 1.0102192889273678 1.0400661533929025 0.8983108159366086 1.0 20.355276115394155 SLGEKS(ph)PAASGAR ddPTM_KYSE-520_SHP099_60min_R1 4 SLGEKSPAASGAR 13 1 O75683 O75683 SURF6 Surfeit locus protein 6 1 S(0.002)LGEKS(0.998)PAASGAR;SLGEKS(1)PAASGAR;SLGEKS(1)PAASGAR;SLGEKS(1)PAASGAR 162.53 6.6588e-07 5761100000.0 3880000.0 3677750.0 3586850.0 2954450.0 3169690.0 3021490.0 3060970.0 3101380.0 3991760.0 3284100.0 True False 3664768.665411759 3501065.369584705 3818064.090162913 3235240.0397122176 3419126.569930913 3002631.760145194 3370402.719788364 3090622.036647536 3266957.0080807772 3255005.428991136 1.1258871130508763 1.075594325712026 1.172982403088124 0.9939276939132342 1.0504211573590663 0.9224659760631602 1.0354522575506102 0.9494982739876567 1.0036717539648914 1.0 21.63422851897378 -5.2777559598863855 24.29295104154437 0.9926728627317483 1.11989858004913 0.6802508189383597 0.04117141625242064 299.0330568220473 445214.94940308284 0.011006978200982457 0.0163881234315929 5.275262073295826e-06 5.2777559598863855 0.12722571731738164 SLGGQQGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 SLGGQQGSPK 10 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;A0A2R8Y695;A0A3B3IU98;A0A0C4DGT3;Q6DN90-2 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SLGGQQGS(1)PK;SLGGQQGS(1)PK;SLGGQQGS(1)PK;SLGGQQGS(1)PK 137.84 0.00026463 3498100000.0 5900300.0 5482800.0 4759190.0 4709200.0 5171700.0 4890600.0 4684600.0 4778660.0 6063600.0 4741800.0 True False 5572998.597043556 5219398.058149412 5065975.002373238 5156760.952127393 5578683.3670522 4860075.951324041 5158165.085290138 4762083.943807634 4962603.090916944 4699791.341064578 1.1857970264231312 1.110559529003927 1.077914876371025 1.0972318934821699 1.187006605656782 1.0341046226582382 1.097530658482751 1.0132543336974924 1.0559198761774888 1.0 22.16416527549875 -7.019479807386736 0.5730751413250474 1.0019038225616987 1.1325956300587317 0.5166986848781363 0.04250119187747663 0.6968702503046945 0.4745632300811055 0.04052673820734721 0.02691871318043163 9.56137149784185e-08 7.019479807386736 0.1306918074970329 SLGGSSLTETEAAPSLTLPSVDYIPQDS(ph)PTPSVR ddPTM_KYSE-520_SHP099_60min_R1 1 SLGGSSLTETEAAPSLTLPSVDYIPQDSPTPSVR 34 0 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 SLGGSSLTETEAAPSLTLPS(0.001)VDY(0.004)IPQDS(0.64)PT(0.286)PS(0.069)VR 84.93799999999999 0.0015885 68439000.0 37337.0 55786.0 29754.0 29011.0 32543.0 42903.0 31624.0 33100.0 52515.0 38386.0 True False 35265.84218053576 53105.95682350686 31671.990448083234 31768.19671752478 35103.948955658656 42635.22646294021 34820.862540497685 32985.183825598084 42979.59979541911 38045.92990385609 0.92692811740058 1.3958380556792325 0.8324672449357892 0.8349959324901389 0.9226729125656288 1.1206251646544452 0.9152322634376842 0.8669832465378883 1.129676680371084 1.0 15.215454504195604 -4.783349027806305 24.998248610932492 0.9474453643476688 1.1613834977040047 0.24837279548139368 0.14487592058164345 265.3474695691957 302753.4572569309 0.03659129442287606 0.07627327058584915 1.646838351194549e-05 4.783349027806305 0.21393813335633594 SLGLSLS(ph)GGDQEDAGR ddPTM_KYSE-520_SHP099_60min_R1 3 SLGLSLSGGDQEDAGR 16 0 H0YE82;H7C1L7;H0YEB7;C9JEV6;H7C3G9;Q9UJ70;Q9UJ70-2 H0YE82 NAGK N-acetyl-D-glucosamine kinase 1 SLGLS(0.009)LS(0.991)GGDQEDAGR;S(0.004)LGLS(0.202)LS(0.794)GGDQEDAGR;SLGLSLS(1)GGDQEDAGR 275.37 8.3906e-30 687700000.0 1254360.0 1174360.0 1129080.0 1047970.0 1057620.0 1123660.0 1029260.0 1144290.0 1408330.0 1143410.0 True False 1184778.1502953346 1117941.982849702 1201862.3033918736 1147568.7537163298 1140848.6769653617 1116646.8211394874 1133307.6454095808 1140320.725069295 1152612.7731102079 1133280.2769595194 1.0454414273175026 0.9864655774730603 1.060516385775594 1.0126080697311217 1.0066783126466716 0.9853227342271782 1.000024149762965 1.0062124509293187 1.0170588834410457 1.0 20.11207327441382 -5.513994764988648 21.15976567063337 1.0025788426181292 1.0280716772859342 0.3022381025756128 0.019068469721624837 72.1646518162707 171881.44554725406 0.005344752274000009 0.007303219286734531 3.0620003430013258e-06 5.513994764988648 0.025492834667804942 SLGNILQAKPT(ph)SSPAKGPPQK ddPTM_KYSE-520_SHP099_60min_R1 1 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.396)S(0.302)S(0.302)PAKGPPQK 90.53399999999999 0.0050141000000000005 25759000000.0 286540.0 367300.0 335770.0 300560.0 208970.0 321860.0 230660.0 298090.0 453060.0 377300.0 True False 270645.05499667156 349654.3566714602 357414.27145099494 329125.13203334116 225414.75012334436 319851.15235209477 253977.3638246646 297055.9953647293 370795.72471317917 373957.41553495784 0.7237322854248132 0.9350111594157551 0.9557619573867858 0.8801139337283025 0.6027818696973329 0.8553143728799645 0.6791611912852216 0.7943578146184944 0.9915453185565106 1.0 18.512514466757096 -7.764543445681318 23.820009662923525 0.9957729170342238 0.8062282589330112 0.3472101522858596 0.10551427049272846 55.10132335331058 422770.3691550469 0.09309228693195987 0.028095664197908436 1.7197152968234753e-08 7.764543445681318 -0.18954465810121257 SLGNILQAKPTS(ph)SPAK ddPTM_KYSE-520_SHP099_60min_R1 1 SLGNILQAKPTSSPAK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.133)S(0.524)S(0.344)PAK 68.134 0.018941 6351400000.0 3533300.0 3497200.0 2642100.0 2497600.0 2693600.0 3568100.0 2824000.0 3676800.0 3533600.0 3564900.0 True False 3337300.8055410753 3329189.2625957765 2812413.9935094677 2734971.1530691753 2905570.995512463 3545830.164380512 3109477.479584028 3664046.038971572 2891987.314807062 3533317.759450235 0.944523259085631 0.9422275292652366 0.795969732976143 0.7740518513383642 0.8223350384327036 1.003541262287212 0.8800446750840337 1.0369987327552668 0.8184905835519983 1.0 21.75259206929392 -6.250939739028464 24.911678584313414 0.9458918241775799 0.8527539626753592 0.2541727301652268 0.07866985079409039 1018.6878084837515 2416963.414629842 0.026619245191472123 0.02634323196315392 5.611258302149504e-07 6.250939739028464 -0.0931378615022207 SLGNILQAKPTS(ph)SPAKGPPQK ddPTM_KYSE-520_SHP099_60min_R1 2 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.132)S(0.434)S(0.434)PAKGPPQK;SLGNILQAKPT(0.03)S(0.485)S(0.485)PAKGPPQK 97.059 0.00019252 13095300000.0 13199500.0 14267100.0 12810300.0 9303600.0 10056700.0 13553800.0 9581300.0 11693100.0 15686400.0 12415800.0 True False 12467297.422449084 13581687.100646289 13636072.435204709 10187811.346770665 10848105.075204277 13469205.706673177 10549871.30847679 11652539.36529005 12838145.181964422 12305805.671346245 1.0131232164244937 1.1036812593482523 1.1081007452405944 0.8278865779989297 0.8815436684868032 1.094540744945768 0.8573084599443901 0.9469139751184833 1.0432592164085375 1.0 23.55283577954563 -5.232457340573044 24.99726200363969 0.9472776817406775 1.0778397123465384 0.33024200211629073 0.08131423698636993 820.1168454489058 707357.0665138083 0.02218314147867536 0.03841433568757664 5.855212474684553e-06 5.232457340573044 0.1305620306058609 SLGNILQAKPTSS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 4 SLGNILQAKPTSSPAK 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.032)S(0.098)S(0.869)PAK;SLGNILQAKPT(0.008)S(0.073)S(0.919)PAK;SLGNILQAKPTS(0.011)S(0.989)PAK;SLGNILQAKPT(0.001)S(0.263)S(0.736)PAK 278.64 5.9916999999999994e-30 22439600000.0 15636700.0 15167400.0 11702960.0 11067200.0 11222400.0 16196500.0 12941800.0 15916200.0 16423600.0 15581700.0 True False 14769301.080011362 14438735.337268442 12457351.526998071 12119023.360524977 12105539.03327855 16095411.63571338 14250083.443796258 15860990.417069014 13441488.245264133 15443658.26037918 0.9563343626880241 0.9349297358069055 0.8066321668718544 0.7847249114295944 0.7838517810469426 1.0422020070857354 0.9227142431890605 1.0270228821211682 0.8703564931728884 1.0 23.88051119978168 -6.260397174704959 24.998514916762915 0.9710389993078861 0.8514280946621773 0.4125591034447492 0.07107022178532765 103.13857084908949 2473915.472356531 0.025399696089459974 0.024039293237744532 5.49038532774012e-07 6.260397174704959 -0.11961090464570878 SLGNILQAKPTSS(ph)PAKGPPQK ddPTM_KYSE-520_SHP099_60min_R1 3 SLGNILQAKPTSSPAKGPPQK 21 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SLGNILQAKPT(0.017)S(0.103)S(0.88)PAKGPPQK;SLGNILQAKPT(0.01)S(0.039)S(0.951)PAKGPPQK;SLGNILQAKPT(0.005)S(0.154)S(0.841)PAKGPPQK 151.85 9.3612e-10 3391840000.0 2044050.0 2107050.0 1869660.0 1442850.0 1416770.0 2071570.0 1398940.0 1682910.0 2520720.0 1846690.0 True False 1930662.4717873477 2005824.15525347 1990181.2751617692 1579978.0301913312 1528261.7386813927 2058640.563220125 1540358.5075386972 1677072.3780041481 2063020.7901801171 1830329.7633030796 1.0548167387625298 1.095881297167832 1.087334815323232 0.8632204217343029 0.8349652446908998 1.1247375224369556 0.8415743099532569 0.9162678833226436 1.1271306578422868 1.0 20.803672165933293 -5.23434789737053 24.066075201178712 0.9517180438450001 1.08099803806338 0.23567180217878103 0.09941579682219337 656.8644156387751 583508.0462082099 0.02689487212559692 0.046563591089334146 5.8297791496265775e-06 5.23434789737053 0.12927999421837977 SLGPPGPPFNIT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SLGPPGPPFNITPR 14 0 Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-5 Q9NZM1-2 MYOF Myoferlin 1 SLGPPGPPFNIT(1)PR 117.0 0.00059515 336870000.0 409380.0 464480.0 439640.0 262790.0 437260.0 400640.0 384750.0 446030.0 516740.0 471420.0 True False 386670.8753212028 442165.68360130634 467979.8978488714 287765.4825893057 471669.87433092564 398139.4571501376 423644.2847981434 444482.8260341842 422913.04195534415 467243.5855592101 0.8275573753643388 0.946327990938838 1.001575863880036 0.6158789365613228 1.0094731932305032 0.8521025637486991 0.9066882839945553 0.9512871653491289 0.9051232698019601 1.0 18.833815332852534 -7.9510325127492445 0.6278934891116528 0.9975779288123862 0.8758611883681068 0.10849801223540456 0.10572901189725391 1.957130926642249 1.83029237016669 0.10591272199593332 0.04567392770129981 1.1193540817096189e-08 7.9510325127492445 -0.12171674044427938 SLGS(ph)ADELFK ddPTM_KYSE-520_SHP099_60min_R1 2 SLGSADELFK 10 0 Q15075 Q15075 EEA1 Early endosome antigen 1 1 SLGS(1)ADELFK;SLGS(1)ADELFK 249.29 5.8346e-14 185140000.0 474690.0 431430.0 402090.0 363240.0 392130.0 403370.0 368570.0 374410.0 479800.0 375800.0 True False 448357.9994289449 410703.4552103678 428009.3647667466 397762.2203879122 422988.4000855005 400852.41820749606 405828.6524965604 373111.2590979505 392680.4147737232 372470.7043679762 1.2037403054012996 1.1026463300174614 1.1491088017056554 1.0679020275241555 1.135628641729676 1.076198513082201 1.0895585820237523 1.001719745264426 1.0542585233382036 1.0 18.506767433367045 -1.0000000000000002 0.1349167463620526 0.9653512085969658 1.6892849482946866 0.715752553439121 0.03220387579530624 41.51576486345807 0.37692802088819866 0.14890801511411364 5.755434054305546 0.09999999999999995 1.0000000000000002 0.7239337396977208 SLGS(ph)PLLHER ddPTM_KYSE-520_SHP099_60min_R1 3 SLGSPLLHER 10 0 E7EV32;E7EMT6;E7ENY2;E7EVA2;E7EW82;H7C3L4;E7EQA9;Q92844 E7EV32 TANK TRAF family member-associated NF-kappa-B activator 1 S(0.008)LGS(0.992)PLLHER;S(0.027)LGS(0.973)PLLHER;S(0.003)LGS(0.997)PLLHER 110.38 0.00044928 1000630000.0 998580.0 1119250.0 854760.0 858650.0 867600.0 1045990.0 823390.0 798940.0 977080.0 945530.0 True False 943186.7767801213 1065479.5499714988 909859.1972643547 940255.8378374641 935875.184031265 1039461.5884197092 906626.296712003 796168.6636139986 799666.9021823885 937153.3398112094 1.0064380467022902 1.1369319242741438 0.9708754785504439 1.0033105553749397 0.9986361295151529 1.109169166093043 0.9674257756949828 0.8495607173254994 0.8532935520920005 1.0 19.837925599680577 -7.011554463794416 6.127794527913879 0.8914777445656713 1.0361944750127718 0.49608554895480583 0.06176170339874907 0.12345804117090095 18.87576389560676 0.02757004780108936 0.01696014490473394 9.737456626414795e-08 7.011554463794416 0.14471673044710054 SLGS(ph)VQAPSYGAR ddPTM_KYSE-520_SHP099_60min_R1 3 SLGSVQAPSYGAR 13 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 SLGS(1)VQAPSYGAR;SLGS(1)VQAPSYGAR;SLGS(1)VQAPSYGAR 188.0 2.7551e-08 2083130000.0 2060340.0 1693140.0 2035170.0 1716680.0 1876460.0 1595630.0 1698200.0 1969650.0 2238570.0 2474610.0 True False 1946048.8330140372 1611799.0129450462 2166360.3145871353 1879832.7510613378 2024126.7264030764 1585671.0813011045 1869870.628834844 1962817.7438697666 1832102.1177574291 2452686.88061745 0.7934354965539386 0.6571564538801973 0.883260040939986 0.7664381319592253 0.8252691129874328 0.6465036747380982 0.7623764140509101 0.8002724519713819 0.7469775829257943 1.0 21.22593163501164 -10.622767098403148 2.583459524311057 1.024985736992138 0.7643042426826584 0.5218856874878679 0.06758376013193157 10412370.934522962 9075778.924825346 1744851.5822768633 0.01705313317018606 2.383597392135924e-11 10.622767098403148 -0.2606814943094796 SLGSASPGPGQPPLSS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 5 SLGSASPGPGQPPLSSPTR 19 0 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 SLGSASPGPGQPPLS(0.081)S(0.91)PT(0.009)R;SLGSASPGPGQPPLS(0.001)S(0.991)PT(0.009)R;SLGSASPGPGQPPLS(0.082)S(0.917)PT(0.001)R;SLGSASPGPGQPPLS(0.084)S(0.913)PT(0.002)R;SLGSASPGPGQPPLS(0.083)S(0.913)PT(0.003)R 347.14 4.332399999999999e-65 1934840000.0 961173.0 1676070.0 1048260.0 1605650.0 1585730.0 2170680.0 1586360.0 2688370.0 3057170.0 1962290.0 True False 907854.8176391285 1595549.08136764 1115832.516875302 1758250.4932437262 1710517.929430497 2157131.980947138 1746724.7501816284 2679044.6719402773 2502064.992984128 1944905.6372385207 0.46678604877105945 0.8203735188063338 0.5737206451103817 0.9040286888880547 0.8794863342877552 1.109119095366471 0.8981025694705271 1.3774676882237464 1.2864711506192616 1.0 20.891268729681908 -5.827315284755984 0.6621423851339114 1.2135913057766181 0.5626980273495835 0.6810507713904903 0.15175256531434195 0.4778247999854645 0.4535073590886836 0.09943707380564624 0.1709971099976744 1.4882802386561662e-06 5.827315284755984 -0.6508932784270346 SLGSS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 1 SLGSSPVK 8 0 Q9HCM1 Q9HCM1 KIAA1551 Uncharacterized protein KIAA1551 1 SLGS(0.12)S(0.88)PVK 140.17 0.0024114 0.0 701860.0 635240.0 546970.0 416530.0 507690.0 599300.0 457810.0 540140.0 687350.0 644620.0 True False 662926.4266767774 604722.1168853211 582228.5613829436 456116.8859656892 547642.3146390427 595559.5464009524 504089.90259503014 538266.3804096233 562544.5666834489 638909.1683067712 1.0375910372888473 0.9464915310073697 0.9112853442469111 0.713899422001541 0.8571520676255081 0.9321505715425819 0.7889852385918372 0.8424771581164344 0.8804765913350362 1.0 19.28525131680176 -4.613530779352684 2.1546814890421624 0.8520230178720316 1.0318021486872995 0.34978109300763804 0.0738763582485415 0.3746563330977451 3.0808360870530818 0.01980179321765765 0.09825569850212394 2.434833232144621e-05 4.613530779352684 0.17977913081526786 SLGVLPFTLNSGS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 4 SLGVLPFTLNSGSPEK 16 0 P42695 P42695 NCAPD3 Condensin-2 complex subunit D3 1 SLGVLPFTLNS(0.009)GS(0.991)PEK;SLGVLPFTLNS(0.088)GS(0.912)PEK;SLGVLPFTLNS(0.374)GS(0.626)PEK;SLGVLPFTLNS(0.018)GS(0.982)PEK 202.34 1.1472e-12 5302026000.0 1648040.0 1950720.0 1505830.0 1245760.0 1424810.0 1885730.0 1449650.0 1588440.0 1896630.0 1664870.0 True False 1556619.935913709 1857004.4831095836 1602898.2112131887 1364156.655848599 1536934.4409400485 1873960.4595939717 1596194.7692206062 1582930.072384682 1552249.8021514968 1650120.54704926 0.943337102672439 1.1253750439204413 0.9713824932848002 0.8267012117920592 0.9314073712301744 1.1356506425818294 0.967320097961883 0.9592814750505787 0.9406887302429053 1.0 20.654139991539232 -4.960712943551546 24.938452024989218 0.9644188362979531 1.0378618839098381 0.09767457739976138 0.08236119644422443 340.9056103694181 216394.9121682908 0.022493504187114023 0.04682387599406007 1.0946796797075885e-05 4.960712943551546 0.07344304761188503 SLHPWYGITPTSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SLHPWYGITPTSSPK 15 0 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 SLHPWYGITPT(0.013)S(0.262)S(0.725)PK 144.33 0.0013394 0.0 208340.0 260320.0 302710.0 583160.0 216340.0 163660.0 231510.0 201000.0 233160.0 194580.0 True False 196782.96488450663 247813.83645171367 322223.17095312505 638583.3510665532 233364.72719378033 162638.53723340546 254913.2901198654 200302.77791375286 190824.02148528834 192856.17258094935 1.0203612477163988 1.2849670982021404 1.670795218223442 3.3111895902554767 1.2100454140031631 0.8433151765735661 1.3217792653894354 1.0386122219120462 0.9894628672317551 1.0 17.55716579623659 -5.975802474025726 24.99999379967512 1.05518030721035 1.8336834493233287 0.29653335080713505 0.5740853244805455 314.23369777171354 324653.1260757403 0.1893916168621855 0.21474129241195353 1.0572982806617487e-06 5.975802474025726 0.7785031421129787 SLIEEGGDWDRR ddPTM_KYSE-520_SHP099_60min_R1 8 SLIEEGGDWDRR 12 1 Q15008-3;Q15008-2;Q15008;Q15008-4;H7C531;C9J0E9 Q15008-3 PSMD6 26S proteasome non-ATPase regulatory subunit 6 0 ;;;;;;; 219.43 1.8831999999999998e-10 4985280000.0 2917670.0 2818620.0 1866419.0 1495451.0 2550109.0 2525050.0 1925432.0 2047355.0 2085500.0 2269390.0 False True 2755821.0288690557 2683209.2643651254 1986731.355115987 1637578.21341626 2750788.0701645752 2509290.226330258 2120073.4569654544 2040253.2033612472 1706825.7711767403 2249284.970158704 1.22519870333487 1.1929165490203781 0.883272409442992 0.7280439051263106 1.2229611217161542 1.115594626568464 0.9425544051076228 0.9070674594056848 0.7588303811305469 1.0 21.10103502234306 -6.9726289165768796 4.059416936015192 0.8807065559786974 1.0511611654126636 0.20013279450830934 0.15711982082975479 0.39726751590978604 14.671255478853958 0.07837994388580431 0.048859232794657016 1.0650526650279103e-07 6.9726289165768796 0.17045460943396618 SLIGS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 SLIGSPGR 8 0 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9J7T7;A0A384DVL6 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 SLIGS(1)PGR;SLIGS(1)PGR 76.943 0.014793 1068590000.0 1558780.0 1474400.0 1290350.0 1130710.0 1389790.0 1246440.0 1058890.0 1181830.0 1490500.0 1270980.0 True False 1472311.3660491079 1403567.6108804822 1373528.025632997 1238172.338439642 1499158.566176593 1238660.5056165592 1165932.9349705162 1177730.507571197 1219862.7724473411 1259720.1060074782 1.1687607104370275 1.1141900523671964 1.0903438145368802 0.9828947974513726 1.1900727463404426 0.9832823178017974 0.925549198913552 0.9349144321462514 0.9683601671751833 1.0 20.26467178992913 -6.4327704992388615 6.552894894310974 0.9520715280836657 1.1010762329860342 0.6399775727724959 0.055096818779303364 0.16086481860260182 9.81512006763052 0.019598491819043773 0.017178389622444227 3.691726344771624e-07 6.4327704992388615 0.1490047049023685 SLIKT(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 SLIKTPER 8 1 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3;A0A494BZU9;H0YDS4 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 1 S(0.002)LIKT(0.998)PER 68.44 0.06776599999999999 223740000.0 224040.0 193240.0 183880.0 156280.0 183360.0 209190.0 178290.0 197220.0 241000.0 215200.0 True False 211612.05458733274 183956.46034084645 195733.19901840237 171132.8042127046 197789.38882431143 207884.36761490966 196313.2931427183 196535.88985149426 197240.4751156051 213293.49542306675 0.9921167739672563 0.8624569632372969 0.9176707364196287 0.8023348479205303 0.9273109263458645 0.9746399776635095 0.9203904355045226 0.9214340524621538 0.9247374127578502 1.0 17.702480444503614 -5.984349639122569 24.997440396906985 0.9426322980982276 0.8895944675842433 0.2026156413965854 0.05022909844669276 391.40520267405134 625166.2729443143 0.015196235377760957 0.017225300732705798 1.0366934649845735e-06 5.984349639122569 -0.05303783051398425 SLILPDS(ph)S(ph)FDGTESDR ddPTM_KYSE-520_SHP099_60min_R1 1 SLILPDSSFDGTESDR 16 0 Q99698;Q99698-2 Q99698 LYST Lysosomal-trafficking regulator 2 S(0.36)LILPDS(0.586)S(0.592)FDGT(0.44)ES(0.021)DR 48.31399999999999 0.063746 96849000.0 94926.0 102490.0 97493.0 72964.0 76250.0 73426.0 72711.0 69331.0 103650.0 84687.0 True False 89660.26554971052 97566.22655937361 103777.55477431529 79898.47662257348 82250.44119684643 72967.72109800829 80061.33747097531 69090.50694297708 84829.77280386924 83936.73906548895 1.0681885732987073 1.1623780914725637 1.236378204940106 0.9518892145695016 0.9799098953876819 0.8693180353489497 0.9538294954311964 0.8231259364158933 1.0106393666030262 1.0 16.35701479529374 -5.33199343161176 6.671033063870974 0.9319374999531925 1.1558338664133174 0.6864028939779521 0.0662376806957788 0.126240471476863 9.958213191163155 0.018306762681816555 0.02735516939906414 4.655931352273207e-06 5.33199343161176 0.2238963664601249 SLIPDIKPLAGQEAVVDLHADDS(ph)RISEDETER ddPTM_KYSE-520_SHP099_60min_R1 4 SLIPDIKPLAGQEAVVDLHADDSRISEDETER 32 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SLIPDIKPLAGQEAVVDLHADDS(0.666)RIS(0.334)EDETER;SLIPDIKPLAGQEAVVDLHADDS(0.584)RIS(0.412)EDET(0.004)ER;SLIPDIKPLAGQEAVVDLHADDS(0.498)RIS(0.498)EDET(0.004)ER;SLIPDIKPLAGQEAVVDLHADDS(0.587)RIS(0.411)EDET(0.001)ER 193.89 1.1942e-15 35249080000.0 576800.0 645870.0 529140.0 684050.0 552180.0 506358.0 515890.0 538590.0 627410.0 487327.0 True False 544803.7541777062 614841.4357293658 563249.211053935 749061.9063328679 595633.4245255687 503197.63189803646 568041.1958012059 536721.7569978513 513488.15971901204 483009.6619146689 1.1279355200019874 1.272938171240945 1.1661241077894662 1.5508217855592321 1.233170827607164 1.041796203213289 1.1760452028008481 1.1112029413040425 1.0631012176516825 1.0 18.88169252282904 -6.13009545865041 5.462630203327875 1.0925665769891726 1.284285013806313 0.4153015832130521 0.11379445088037334 0.2475816158660968 9.983886397813341 0.03840913842077265 0.03854609066175113 7.411473179813427e-07 6.13009545865041 0.19171843681714051 SLIPDIKPLAGQEAVVDLHADDS(ph)RISEDETERNGDDGTHDK ddPTM_KYSE-520_SHP099_60min_R1 6 SLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGTHDK 41 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SLIPDIKPLAGQEAVVDLHADDS(0.516)RIS(0.399)EDET(0.084)ERNGDDGTHDK;SLIPDIKPLAGQEAVVDLHADDS(0.311)RIS(0.311)EDET(0.311)ERNGDDGT(0.068)HDK;SLIPDIKPLAGQEAVVDLHADDS(0.49)RIS(0.49)EDET(0.019)ERNGDDGTHDK;SLIPDIKPLAGQEAVVDLHADDS(0.495)RIS(0.495)EDET(0.01)ERNGDDGTHDK;SLIPDIKPLAGQEAVVDLHADDS(0.333)RIS(0.333)EDET(0.333)ERNGDDGT(0.002)HDK;SLIPDIKPLAGQEAVVDLHADDS(0.482)RIS(0.482)EDET(0.028)ERNGDDGT(0.008)HDK 194.87 3.4232e-16 23467490000.0 4452850.0 4507100.0 4465180.0 4066950.0 3827070.0 3107670.0 3008420.0 3298710.0 5940980.0 3170130.0 True False 4205841.533963593 4290572.150704978 4753012.647340607 4453471.7052268945 4128238.635950361 3088273.878798346 3312540.4529497875 3287267.5449347026 4862247.791918295 3142045.1145238196 1.3385681556647517 1.3655348648153383 1.512713049653627 1.4173799366027955 1.3138699431360648 0.9828865488032235 1.0542625367273908 1.0462190786948302 1.5474786690499747 1.0 21.58327246479795 -6.049942504068409 5.190412120558679 1.124916742444222 1.4087307744712434 0.42546920875599514 0.15605265675321017 0.20554598558537085 12.54471187319308 0.05198007492978213 0.05331536438169614 8.913689380100653e-07 6.049942504068409 0.2838140320270215 SLIPDIKPLAGQEAVVDLHADDSRIS(ph)EDETER ddPTM_KYSE-520_SHP099_60min_R1 13 SLIPDIKPLAGQEAVVDLHADDSRISEDETER 32 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SLIPDIKPLAGQEAVVDLHADDS(0.17)RIS(0.761)EDET(0.068)ER;SLIPDIKPLAGQEAVVDLHADDS(0.217)RIS(0.781)EDET(0.002)ER;SLIPDIKPLAGQEAVVDLHADDS(0.326)RIS(0.674)EDETER;SLIPDIKPLAGQEAVVDLHADDS(0.041)RIS(0.953)EDET(0.005)ER;SLIPDIKPLAGQEAVVDLHADDS(0.014)RIS(0.985)EDET(0.001)ER;SLIPDIKPLAGQEAVVDLHADDS(0.002)RIS(0.998)EDETER;SLIPDIKPLAGQEAVVDLHADDS(0.184)RIS(0.816)EDETER;SLIPDIKPLAGQEAVVDLHADDS(0.104)RIS(0.896)EDETER;SLIPDIKPLAGQEAVVDLHADDSRIS(0.999)EDETER;SLIPDIKPLAGQEAVVDLHADDS(0.439)RIS(0.555)EDET(0.005)ER;SLIPDIKPLAGQEAVVDLHADDS(0.049)RIS(0.951)EDETER;SLIPDIKPLAGQEAVVDLHADDS(0.178)RIS(0.761)EDET(0.061)ER;SLIPDIKPLAGQEAVVDLHADDS(0.158)RIS(0.798)EDET(0.044)ER 296.25 5.911099999999999e-54 38240724000.0 7594452.0 7423560.0 6954024.0 8020016.0 7137361.0 6599330.0 7062421.0 6933227.0 8732243.0 6043494.0 True False 7173172.608395277 7066921.034609276 7402291.513871797 8782235.909334267 7699030.704671012 6558141.133572823 7776359.437266759 6909177.25376435 7146687.79313244 5989953.34492719 1.19753396985473 1.1797956724644867 1.2357845024186536 1.4661609871756052 1.285323985234579 1.0948567970277805 1.2982337239491943 1.1534609463386953 1.193112430363898 1.0 22.514113335392608 -8.374244475295932 0.6064527839726862 0.9953214079462863 1.2598982169612043 0.39313970321794267 0.09271487257137748 1.5610077087203627 1.1160251632500677 0.11793463209381796 0.04274181139422256 4.224307504192658e-09 8.374244475295932 0.264576809014918 SLIPDIKPLAGQEAVVDLHADDSRISEDET(ph)ERNGDDGTHDK ddPTM_KYSE-520_SHP099_60min_R1 1 SLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGTHDK 41 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SLIPDIKPLAGQEAVVDLHADDS(0.269)RIS(0.269)EDET(0.462)ERNGDDGTHDK 205.21 6.1658e-17 738390000.0 427090.0 538450.0 575670.0 445110.0 436060.0 391320.0 386510.0 359530.0 671880.0 322410.0 True False 403398.4663171928 512582.05377007247 612778.6093045673 487413.12057279923 470375.44115799165 388877.62672721635 425582.2027740876 358282.87434493325 549883.5287164848 319553.6982311843 1.2623808409982795 1.6040560838674442 1.9176076280652106 1.5252933177452241 1.4719762085735397 1.2169398410337877 1.3318018384071273 1.1211977089551002 1.7207859954687994 1.0 18.285698858386464 -5.973291747218982 2.665702205331135 1.2899773797734824 1.6049576260918534 0.2725246452804413 0.22968963150216393 0.37134873536129953 5.35230009026581 0.07809286490977925 0.08646354480581303 1.063428395950958e-06 5.973291747218982 0.31498024631837107 SLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGT(ph)HDK ddPTM_KYSE-520_SHP099_60min_R1 1 SLIPDIKPLAGQEAVVDLHADDSRISEDETERNGDDGTHDK 41 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2 S4R3H4 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SLIPDIKPLAGQEAVVDLHADDS(0.212)RIS(0.212)EDET(0.212)ERNGDDGT(0.365)HDK 54.994 0.024425 145540000.0 69072.0 80604.0 77704.0 76872.0 70209.0 61884.0 66873.0 64943.0 102380.0 55974.0 True False 65240.4384683817 76731.66285092932 82712.92417079577 84177.89176759052 75734.04886543463 61497.759001295766 73633.17545758598 64717.72789081018 83790.37278977451 55478.11390711307 1.1759671314279658 1.3830979001809802 1.4909108898201173 1.517317115512064 1.365115782274719 1.108504862012097 1.3272472741389498 1.1665452073436922 1.5103320370635638 1.0 15.759631120651699 -6.02173120146526 23.668526370496 1.2391833654576943 1.403645048480433 0.2198205185478278 0.15285116774796792 619.825941145822 675082.5366339408 0.04906440913874592 0.0495628164127079 9.511933350208868e-07 6.02173120146526 0.16446168302273878 SLIPPIPVS(ph)PPILAPR ddPTM_KYSE-520_SHP099_60min_R1 2 SLIPPIPVSPPILAPR 16 0 F8W689;P48382-2;P48382 F8W689 RFX5 DNA-binding protein RFX5 1 SLIPPIPVS(1)PPILAPR;SLIPPIPVS(1)PPILAPR 174.59 2.5196999999999997e-08 111865000.0 120375.0 160649.0 135490.0 104501.0 117955.0 159975.0 106570.0 155114.0 167982.0 131633.0 True False 113697.55878838678 152931.18090093488 144223.90219166502 114432.74362062865 127237.38742785595 158976.53668528673 117343.13562297104 154575.94573787978 137480.7032816165 130466.83402892426 0.8714671405545125 1.1721843489129988 1.105444945185769 0.8771021729189743 0.975246991887974 1.2185206904771055 0.8994096966969879 1.1847911148331427 1.0537597873428681 1.0 16.993323580364155 SLKES(ph)EQES(ph)EEEILAQK ddPTM_KYSE-520_SHP099_60min_R1 8 SLKESEQESEEEILAQK 17 1 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 SLKES(1)EQES(1)EEEILAQK;S(0.132)LKES(0.868)EQES(1)EEEILAQK;S(0.363)LKES(0.638)EQES(0.999)EEEILAQK;S(0.149)LKES(0.851)EQES(1)EEEILAQK;S(0.03)LKES(0.97)EQES(1)EEEILAQK;S(0.118)LKES(0.882)EQES(1)EEEILAQK;SLKES(1)EQES(1)EEEILAQK;S(0.009)LKES(0.991)EQES(1)EEEILAQK 193.42 1.4504e-12 11591040000.0 13691050.0 11873660.0 10617030.0 12252000.0 12743210.0 12018830.0 12207070.0 13668400.0 14246380.0 12486500.0 True False 12931580.164068459 11303231.550872989 11301420.74164862 13416426.396301864 13746028.12805331 11943816.023811376 13441079.765122456 13620987.51062853 11659596.51401433 12375879.324350003 1.0449019277866658 0.9133275506842944 0.9131812330629836 1.0840786375400853 1.1107112284948906 0.9650882746013427 1.0860706874118133 1.1006076541025034 0.9421226733419774 1.0 23.56102769864097 -5.262367506408539 24.999697765056638 1.047021471724847 0.9527559675194682 0.26037829665948997 0.06431594374590809 102.19903925758221 2752832.966694397 0.01762120617254551 0.027919322281683027 5.465532657006451e-06 5.262367506408539 -0.09426550420537871 SLKES(ph)EQES(ph)EEEILAQKK ddPTM_KYSE-520_SHP099_60min_R1 2 SLKESEQESEEEILAQKK 18 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 2 S(0.013)LKES(0.987)EQES(1)EEEILAQKK;S(0.102)LKES(0.898)EQES(1)EEEILAQKK 135.01 7.2605999999999996e-06 3442000000.0 6770800.0 7250900.0 6752000.0 5981800.0 6029300.0 5784500.0 5290100.0 5659100.0 8646800.0 5806200.0 True False 6395210.22674482 6902555.880177215 7187244.723581965 6550308.473506258 6503771.607975692 5748396.789848674 5824874.934400667 5639469.902943864 7076759.088089686 5754761.58515525 1.1112902128285638 1.1994512332157719 1.2489213701088662 1.1382415025503696 1.130154831218822 0.9988939949618427 1.0121835367474266 0.9799658629631527 1.2297223757009512 1.0 22.456324729299563 -5.951987130455651 2.4483129993838513 1.0416502982912863 1.184003876017868 0.40270587028528415 0.07473052123543442 0.28353748359316655 3.444590037488234 0.025764564046294788 0.028979751499648983 1.1168963445263578e-06 5.951987130455651 0.14235357772658164 SLKESEQES(ph)EEEILAQKK ddPTM_KYSE-520_SHP099_60min_R1 3 SLKESEQESEEEILAQKK 18 2 Q9BW71 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 SLKESEQES(1)EEEILAQKK;SLKESEQES(1)EEEILAQKK;SLKESEQES(1)EEEILAQKK 151.84 1.6817e-06 3467780000.0 1746880.0 1819800.0 1670140.0 1129470.0 1424620.0 1219060.0 935750.0 950640.0 2133990.0 1171930.0 True False 1649977.0840810535 1732374.0764245098 1777799.8967184841 1236814.4892124631 1536729.4890210014 1211451.3943526547 1030344.7420399275 947342.4517210441 1746511.2095101688 1161547.6119477444 1.420498881930707 1.4914361310765156 1.5305441450973976 1.0647987878331628 1.3230017204754372 1.0429631828188506 0.8870447766770326 0.8155864141741812 1.503607076925178 1.0 20.147616860890682 -5.489459308709669 1.2318455467745146 1.0432516263340184 1.4974479638101932 0.4265111240106352 0.1972074961480929 0.44428740852222054 1.3641540567586887 0.07362218031679216 0.14410769462484488 3.239967779422135e-06 5.489459308709669 0.4541963374761748 SLKLS(ph)PVQK ddPTM_KYSE-520_SHP099_60min_R1 2 SLKLSPVQK 9 1 A0A2R8YFT6;Q92834-4;Q92834-2;Q92834;H7C4H4;A0A2R8Y838;A0A2R8Y414;Q92834-3;Q92834-6 A0A2R8YFT6 RPGR X-linked retinitis pigmentosa GTPase regulator 1 S(0.001)LKLS(0.999)PVQK;SLKLS(1)PVQK 95.417 0.0021408 2792200000.0 8276200.0 7321900.0 7206800.0 6236700.0 6717000.0 7301300.0 6182800.0 8022700.0 9366300.0 7997900.0 True False 7817102.687804329 6970144.93360403 7671361.859287696 6829434.092867779 7245589.685497928 7255729.878420285 6807817.762313084 7994871.126212255 7665616.025208683 7927044.828272052 0.9861307532820288 0.8792866805476854 0.9677454871867944 0.8615359495016843 0.9140341504890078 0.9153133400409821 0.8588090404172801 1.0085563156774764 0.9670206478294439 1.0 22.918351704334153 -7.277578633151808 24.892070268732297 0.9908413689930506 0.911018530006229 0.4559950191411146 0.04004214007756255 704.2519273558116 1086183.7764723336 0.0205150084655283 0.009904616866642532 5.277416454800088e-08 7.277578633151808 -0.07982283898682163 SLKQPLEQNQTIS(ph)PLSTYEESK ddPTM_KYSE-520_SHP099_60min_R1 2 SLKQPLEQNQTISPLSTYEESK 22 1 Q9UQR1 Q9UQR1 ZNF148 Zinc finger protein 148 1 SLKQPLEQNQT(0.001)IS(0.998)PLS(0.001)TYEESK;SLKQPLEQNQT(0.001)IS(0.999)PLSTYEESK 199.31 3.9153e-14 1211110000.0 544530.0 737340.0 508680.0 410560.0 443690.0 666620.0 510430.0 764770.0 1058310.0 671330.0 True False 514323.8354063574 701917.0796300955 541470.3267167768 449579.4989606351 478605.87874923035 662459.3773098658 562029.2457167405 762117.1913686601 866147.581824051 665382.5384868359 0.7729746509068226 1.0549075742599796 0.8137729732856364 0.6756707201590167 0.7192943172774577 0.995606796079113 0.8446708670697403 1.1453820130323995 1.3017287525966343 1.0 19.343824480770312 -7.275931399389057 4.816208688614086 1.1732762722502146 0.8407406510172654 0.5496035140735712 0.12801386643936052 0.1451525447835806 9.719498107586169 0.07212685163402997 0.035637544359837334 5.2974711547222036e-08 7.275931399389057 -0.3325356212329492 SLLDS(ph)DDS(ph)SDLLDFALSASRPESR ddPTM_KYSE-520_SHP099_60min_R1 1 SLLDSDDSSDLLDFALSASRPESR 24 1 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 2 S(0.024)LLDS(0.974)DDS(0.842)S(0.161)DLLDFALSASRPESR 72.425 0.011708 61671000.0 58581.0 58142.0 48336.0 55061.0 49963.0 46358.0 43391.0 55770.0 64179.0 38951.0 True False 55331.395151671735 55348.771047078735 51451.81590033442 60293.98088530669 53894.80384941688 46068.66252637302 47777.385735350836 55576.54688681583 52525.71142093123 38605.924443419426 1.4332358556201663 1.433685939270733 1.3327440449131542 1.561780523444611 1.3960241757299383 1.1933055143878482 1.2375661617784348 1.439585962208169 1.360560902975204 1.0 15.236534639200476 -6.082741781745337 6.490259400558562 1.274187779941453 1.4377497336256948 0.3660911360164414 0.12016490740701595 0.3155169925119463 20.519757537435805 0.03947733265799867 0.039685217797054244 8.265292325875572e-07 6.082741781745337 0.16356195368424187 SLLDS(ph)DDSSDLLDFALSASRPESR ddPTM_KYSE-520_SHP099_60min_R1 4 SLLDSDDSSDLLDFALSASRPESR 24 1 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 SLLDS(1)DDSSDLLDFALSASRPESR;SLLDS(1)DDSSDLLDFALSASRPESR;SLLDS(1)DDSSDLLDFALSASRPESR;SLLDS(0.999)DDSSDLLDFALSASRPESR 216.51 3.2280000000000004e-21 777783000.0 242668.0 293706.0 248634.0 244465.0 269497.0 214771.0 204322.0 259611.0 367465.0 227312.0 True False 229206.7222933351 279595.9228983058 264661.3454684659 267698.88009891746 290704.8806718235 213430.5345237424 224976.86175055543 258710.47003466272 300742.61903882114 225298.1925260601 1.017348251770031 1.241003843676931 1.1747157955466183 1.1881980813847537 1.29031164170657 0.9473246639519978 0.9985737534247306 1.1483024658741452 1.3348647659658186 1.0 17.78147621391273 -6.247089782230276 24.994498755050575 1.0896295606287505 1.185480575153575 0.13969534163091935 0.11942456354114361 1792.9758627016733 3123052.511387513 0.04087093357556682 0.04069172737912859 5.661222417954362e-07 6.247089782230276 0.09585101452482458 SLLDSDDS(ph)SDLLDFALSASRPESR ddPTM_KYSE-520_SHP099_60min_R1 2 SLLDSDDSSDLLDFALSASRPESR 24 1 Q5TGY3 Q5TGY3 AHDC1 AT-hook DNA-binding motif-containing protein 1 1 SLLDSDDS(0.986)S(0.014)DLLDFALSASRPESR;SLLDSDDS(0.964)S(0.036)DLLDFALSASRPESR 207.88 4.994e-21 115374000.0 87480.0 46888.0 44959.0 37896.0 41690.0 57022.0 40564.0 43012.0 57557.0 39189.0 True False 82627.31001294348 44635.43009967717 47857.12907694342 41497.62444615215 44970.765816347885 56666.10454676306 44664.604986489634 42862.80141107627 47106.099693895776 38841.81594858063 2.127277213875034 1.1491591989099121 1.232103286321561 1.0683749828042879 1.1577925675741023 1.4588943169335462 1.149910319476754 1.1035220770269514 1.2127676974798378 1.0 15.245323031356206 -4.260297753107037 24.991706479699168 1.1802553258016037 2.127277517502892 0.8594266702300979 0.11604935069005888 33.82379345498188 740355.3868629755 0.028897974661258128 0.17315564967607416 5.491642367355638e-05 4.260297753107037 0.9470221917012882 SLLFGAMSEMIS(ph)PSEK ddPTM_KYSE-520_SHP099_60min_R1 2 SLLFGAMSEMISPSEK 16 0 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 1 SLLFGAMSEMIS(0.998)PS(0.002)EK;SLLFGAMSEMIS(0.998)PS(0.002)EK 208.43 1.0071000000000001e-17 552310000.0 415260.0 496950.0 367850.0 321290.0 324040.0 467830.0 329160.0 412450.0 484830.0 442680.0 True False 392224.6999997129 473075.7760628427 391562.19958080974 351825.30500063946 349540.10446460446 464910.0994372731 362434.70509202546 411019.30721655395 396797.0935697052 438758.1995998285 0.8939427237085102 1.078215236762102 0.8924327794624372 0.8018660513274132 0.7966577143934954 1.0596043557961916 0.8260465682979503 0.9367786347729251 0.9043639387972826 1.0 18.7430665614756 -9.454451819120816 17.201796545551034 0.9999999999869775 0.9106272153780166 0.0802003665112545 0.0914245001243355 0.0 0.0 0.09007303753998401 0.021845920458681112 3.5119488411724216e-10 9.454451819120816 -0.08937278460896092 SLLGDSAPTLHLNKGT(ph)PS(ph)QSPVVGR ddPTM_KYSE-520_SHP099_60min_R1 1 SLLGDSAPTLHLNKGTPSQSPVVGR 25 1 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 SLLGDSAPT(0.001)LHLNKGT(0.999)PS(0.746)QS(0.254)PVVGR 133.4 1.1055e-05 772580000.0 1133500.0 1342100.0 1335600.0 1583200.0 1039000.0 814450.0 748720.0 716200.0 1307200.0 739810.0 True False 1070622.4954237703 1277623.50146683 1421694.9130355585 1733666.8519935652 1120763.3888986695 809366.7154451126 824407.9244030295 713715.6693623371 1069845.4318303699 733255.8589634708 1.4600940208472393 1.742397944522225 1.9388797179817479 2.3643409470253314 1.5284751907512593 1.103798497552044 1.1243114041644497 0.97335147157398 1.4590342767157722 1.0 19.483957168088697 -6.045902160602959 4.494969321381952 1.1388193727113336 1.8808675445369227 0.6744009602857161 0.24334436760758346 0.13183842718575423 5.844778353997954 0.08459709700836807 0.08768533131575705 8.997002463545124e-07 6.045902160602959 0.7420481718255891 SLLGDSAPTLHLNKGT(ph)PSQS(ph)PVVGR ddPTM_KYSE-520_SHP099_60min_R1 3 SLLGDSAPTLHLNKGTPSQSPVVGR 25 1 B8ZZY2;P52594-2;P52594-3;P52594;P52594-4;C9J2I0 B8ZZY2 AGFG1 Arf-GAP domain and FG repeat-containing protein 1 2 SLLGDSAPTLHLNKGT(0.991)PS(0.076)QS(0.934)PVVGR;SLLGDSAPTLHLNKGT(0.999)PS(0.015)QS(0.986)PVVGR;S(0.001)LLGDS(0.024)APT(0.306)LHLNKGT(0.661)PS(0.112)QS(0.897)PVVGR 202.81 8.351800000000001e-16 2285120000.0 1467040.0 1855860.0 1846910.0 1922610.0 1335260.0 1092970.0 874810.0 897650.0 1734340.0 903950.0 True False 1385660.3667282658 1766701.6998973484 1965964.7737604817 2105334.2763462234 1440337.3654098532 1086148.3688133643 963244.3321228415 894536.261663084 1419427.575153522 895941.7062624589 1.5465965665430779 1.9718935814109846 2.19429987466681 2.3498563150150784 1.6076239730131705 1.2122980337017437 1.075119425058517 0.998431321380006 1.584285635138981 1.0 19.77304534196304 -6.062089906801468 3.352728486746729 1.170060320002316 2.0248883439680676 0.7150253833023323 0.2494485586369128 0.13743318664215745 3.047123214848413 0.08810650476113774 0.0917043458896587 8.667824175680774e-07 6.062089906801468 0.8548280239657515 SLLKNS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SLLKNSPR 8 1 Q6NZY4-2;Q6NZY4 Q6NZY4-2 ZCCHC8 Zinc finger CCHC domain-containing protein 8 1 SLLKNS(1)PR 84.18799999999999 0.0096738 404920000.0 385940.0 362750.0 360110.0 311350.0 392120.0 363230.0 305000.0 315400.0 429000.0 310130.0 True False 364531.13884768385 345322.9455011497 383323.2667963725 340940.6103892093 422977.6131423923 360962.94683667255 335832.3765131478 314305.9510149136 351104.4142099365 307382.489477489 1.1859203153287625 1.1234307656501663 1.2470562895367692 1.1091738210877424 1.376062813016448 1.1743120027762917 1.0925553276766673 1.022523929548471 1.1422394776188103 1.0 18.229675456435142 -6.767951097634893 3.738444969532384 1.0623784496065927 1.2063589011864109 0.44227836852480185 0.07718436676439855 0.21801570814628293 6.58210994622839 0.03258874624324121 0.02265440882293652 1.7062745078644293e-07 6.767951097634893 0.1439804515798182 SLLLEPPRGT(ph)PDR ddPTM_KYSE-520_SHP099_60min_R1 8 SLLLEPPRGTPDR 13 1 Q53GT1-3;Q53GT1 Q53GT1-3 KLHL22 Kelch-like protein 22 1 SLLLEPPRGT(1)PDR;SLLLEPPRGT(1)PDR;SLLLEPPRGT(1)PDR;SLLLEPPRGT(1)PDR;SLLLEPPRGT(1)PDR;S(0.001)LLLEPPRGT(0.999)PDR;SLLLEPPRGT(1)PDR;SLLLEPPRGT(1)PDR 108.34 0.00087722 4931750000.0 4711700.0 4053660.0 3744350.0 3370940.0 3620460.0 4169660.0 3607130.0 3847540.0 4845000.0 3851180.0 True False 4450332.60845891 3858916.088932292 3985716.792171829 3691313.1240899307 3905369.6044004587 4143635.6052831593 3971773.9025962953 3834193.7817625897 3965270.1325108144 3817061.5413726983 1.1659053856539274 1.0109651225441185 1.0441845773171576 0.9670562248159232 1.0231350901919185 1.0855564052009017 1.0405317963953915 1.004488332243061 1.0388279281147814 1.0 21.864031016217563 -4.257843125008114 24.685291518602416 1.0252871500988494 1.1659054497838883 0.6664827957757021 0.03012950747986685 185.4154759153948 1272659.3206556938 0.007768153717097879 0.05493588188040211 5.522768956204782e-05 4.257843125008114 0.14061829968503892 SLLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SLLSPK 6 0 Q9P0U3-2;Q9P0U3 Q9P0U3-2 SENP1 Sentrin-specific protease 1 1 SLLS(1)PK;SLLS(1)PK 93.162 0.014428999999999999 468690000.0 1478230.0 1355120.0 1209250.0 1137330.0 1274450.0 1309110.0 1216690.0 1349450.0 1530910.0 1303060.0 True False 1396229.6351215516 1290018.0011234125 1287200.1898684092 1245421.501249267 1374741.9643714237 1300939.3589003007 1339684.8989501041 1344769.0729139964 1252935.3351005437 1291515.902165341 1.0810781599983776 0.9988401993042307 0.9966584133500052 0.964309846407007 1.0644406019829464 1.0072964310537411 1.0372964798218927 1.0412330739864464 0.9701276871619516 1.0 20.300633976491923 -4.255276860297297 24.69498561713069 1.0109950947651487 1.081078196962108 0.3456345162446861 0.029664848664817958 737.5105245105747 2955317.389390533 0.007397443850027086 0.06838145751618811 5.555499843586234e-05 4.255276860297297 0.07008310219695923 SLLS(ph)PLHR ddPTM_KYSE-520_SHP099_60min_R1 2 SLLSPLHR 8 0 Q9BY84 Q9BY84 DUSP16 Dual specificity protein phosphatase 16 1 SLLS(1)PLHR;S(0.004)LLS(0.996)PLHR 99.973 0.0018042000000000002 734540000.0 207288.0 208312.0 243233.0 310770.0 301350.0 433950.0 457770.0 453670.0 565750.0 497560.0 True False 195789.32142161648 198304.3788373131 258912.1883665599 340305.4873635922 325064.5305530453 431241.5570844205 504045.8590046679 452096.3246573744 463024.06139690365 493152.00549582206 0.39701617197068295 0.40211613585132855 0.5250149760746605 0.6900620570759805 0.6591568663017415 0.8744597046722827 1.022090254906077 0.9167484256762382 0.9389073880605487 1.0 18.911672875145907 -5.651822337619561 0.7018112309839857 0.9879882691043327 0.34510294390222124 0.948690978815288 0.05180434312212264 0.17962983750698788 0.183874131851393 0.03289904200546818 0.06893983258980867 2.2293469501349423e-06 5.651822337619561 -0.6428853252021114 down SLLS(ph)SPTK ddPTM_KYSE-520_SHP099_60min_R1 2 SLLSSPTK 8 0 Q92667-2;Q92667;I3NI36 Q92667-2 AKAP1 A-kinase anchor protein 1, mitochondrial 1 SLLS(0.609)S(0.391)PTK;SLLS(0.6)S(0.399)PT(0.001)K 140.17 0.00062545 1058940000.0 3279300.0 4064300.0 2824800.0 3280500.0 3176300.0 4023500.0 3500000.0 4256400.0 4918100.0 3722900.0 True False 3097390.6918775165 3869044.9273613263 3006891.127839802 3592277.7336817128 3426256.7393251564 3998387.844058454 3853814.1567082577 4241635.541851233 4025097.015211861 3689918.0023723682 0.8394199247479492 1.0485449608565263 0.8148937526271787 0.9735386345637276 0.9285454953530958 1.0835980207386073 1.0444172890103562 1.1495202709448142 1.0908364393528516 1.0 21.815157326291377 -6.256746814795546 7.5389776471123 1.0813682769785669 0.9248857451532883 0.537656254479659 0.07056867785726081 0.09863986545167061 47.11452483040971 0.022689393026371994 0.0215138486365949 5.536727955774406e-07 6.256746814795546 -0.1564825318252786 SLLSLT(ph)PDKK ddPTM_KYSE-520_SHP099_60min_R1 2 SLLSLTPDKK 10 1 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 SLLS(0.003)LT(0.997)PDKK;SLLS(0.001)LT(0.999)PDKK 190.53 3.7565e-06 1959530000.0 2780300.0 2612700.0 1990980.0 1844230.0 1911320.0 2254060.0 1727160.0 1996280.0 2531100.0 2348100.0 True False 2626071.2166093593 2487181.9702573465 2119321.756480632 2019505.0647120296 2061730.010076807 2239991.5754388953 1901758.1882572097 1989355.3706152567 2071516.043838623 2327297.6607941566 1.128377886872129 1.0686995532013863 0.9106363110241102 0.8677467857819712 0.8858901226125375 0.9624860683590128 0.8171529668483671 0.8547919778926852 0.8900950139449494 1.0 21.150224312206753 -4.710554749594392 3.0436189878433075 0.8891567818976468 1.1192388203376213 0.7257594720372329 0.049677431225299384 0.11824753893796527 2.1605745250288044 0.01293730228435642 0.04075329876398658 1.9473555399232133e-05 4.710554749594392 0.23008203843997455 SLLSNVS(ph)IEDEEEELVAIVR ddPTM_KYSE-520_SHP099_60min_R1 3 SLLSNVSIEDEEEELVAIVR 20 0 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 SLLSNVS(1)IEDEEEELVAIVR;SLLS(0.004)NVS(0.996)IEDEEEELVAIVR;SLLSNVS(1)IEDEEEELVAIVR 217.26 8.2565e-19 70750000.0 86513.0 114793.0 93100.0 110423.0 87204.0 91081.0 73830.4 105445.0 118716.0 91200.0 True False 81713.95143061012 109278.17197219426 99101.37496526692 120917.56872011456 94066.45867711214 90512.52969421842 81293.89734726661 105079.2359060479 97160.16698682227 90392.03895252635 0.9039950019661142 1.2089358005253854 1.0963506976240982 1.3377015290430625 1.0406498157046284 1.001332979575285 0.8993479767611167 1.162483301889398 1.0748752668124957 1.0 16.46390809611173 -5.962206983030523 24.99985541659455 1.02877362295259 1.1452867110113267 0.16316580637891598 0.11833285218521869 290.144368763823 191927.59847837346 0.03666050436807427 0.04156904249108629 1.0909202842431255e-06 5.962206983030523 0.11651308805873684 SLLSS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 4 SLLSSPTK 8 0 Q92667-2;Q92667;I3NI36 Q92667-2 AKAP1 A-kinase anchor protein 1, mitochondrial 1 SLLSS(1)PTK;SLLSS(0.999)PTK;SLLSS(0.999)PTK;SLLS(0.008)S(0.992)PTK 224.68 3.8345e-09 10414400000.0 18754500.0 23096700.0 15875200.0 18573700.0 17663700.0 22343200.0 20018800.0 24151800.0 27201800.0 20672800.0 True False 17714150.498831157 21987099.863146488 16898540.793218076 20338938.86361345 19053732.697294917 22203747.80101078 22042495.668660324 24068023.04287249 22262638.821575407 20489655.075195037 0.8645411762092603 1.0730829671097915 0.8247352496272914 0.9926442777573135 0.9299196412711476 1.0836564949251313 1.0757865658434227 1.1746426650202353 1.0865306780359987 1.0 24.288392362299394 -6.289267312826784 5.6536280812521165 1.0955503846820038 0.941149734049734 0.49007987846262746 0.07454912708953189 0.15216428747739355 15.503723379958366 0.024830543077984255 0.02243134138680301 5.137273496555059e-07 6.289267312826784 -0.15440065063226982 SLMS(ph)S(ph)PEDLTK ddPTM_KYSE-520_SHP099_60min_R1 13 SLMSSPEDLTK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 SLMS(1)S(1)PEDLTK;SLMS(1)S(1)PEDLTK;SLMS(1)S(1)PEDLTK;SLMS(1)S(1)PEDLTK;SLMS(1)S(1)PEDLTK;SLMS(1)S(1)PEDLTK;SLMS(1)S(1)PEDLTK;SLMS(1)S(1)PEDLTK;SLMS(1)S(1)PEDLTK;SLMS(1)S(1)PEDLTK;SLMS(1)S(1)PEDLTK;S(0.003)LMS(0.997)S(1)PEDLTK;S(0.002)LMS(0.998)S(1)PEDLTK 258.78 2.8198e-20 48787610000.0 29426360.0 25372750.0 22036690.0 27973660.0 27553230.0 25445360.0 26494220.0 29317200.0 29753820.0 26205420.0 True False 27794021.15080565 24153805.00472581 23457210.297350675 30632268.235812448 29721512.44456634 25286546.069762964 29172514.316269383 29215505.475885883 24351276.320764307 25973260.366308272 1.070101356503522 0.9299489037601685 0.9031292169918975 1.1793770902765714 1.1443119587373862 0.9735607202615159 1.1231749077644133 1.124830116198402 0.9375517735290578 1.0 24.630523787934003 -5.247338049871519 24.988225554613788 1.07559572914596 0.9639487378247618 0.22853543250991004 0.08454920371120679 1108.9751213442755 1965154.0759189194 0.02290391634475293 0.03943714557789594 5.657987063282341e-06 5.247338049871519 -0.11164699132119815 SLMS(ph)S(ph)PEDLTKDFEELK ddPTM_KYSE-520_SHP099_60min_R1 13 SLMSSPEDLTKDFEELK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 SLMS(1)S(1)PEDLTKDFEELK;SLMS(1)S(1)PEDLTKDFEELK;SLMS(1)S(1)PEDLTKDFEELK;S(0.023)LMS(0.977)S(0.991)PEDLT(0.009)KDFEELK;S(0.021)LMS(0.982)S(0.996)PEDLT(0.001)KDFEELK;S(0.037)LMS(0.983)S(0.979)PEDLTKDFEELK;S(0.005)LMS(0.995)S(1)PEDLTKDFEELK;S(0.012)LMS(0.989)S(1)PEDLTKDFEELK;SLMS(1)S(1)PEDLTKDFEELK;S(0.075)LMS(0.925)S(0.999)PEDLTKDFEELK;S(0.023)LMS(0.977)S(1)PEDLTKDFEELK;S(0.564)LMS(0.716)S(0.716)PEDLT(0.004)KDFEELK;S(0.001)LMS(0.999)S(1)PEDLTKDFEELK 184.35 2.3706e-12 1834068000.0 4536304.0 4420557.0 3857239.0 4164067.0 4229572.0 4122454.0 3775893.0 4326085.0 5260585.0 4009235.0 True False 4284666.174222171 4208186.806328663 4105882.7977406112 4559818.675707603 4562415.253427256 4096724.2354393336 4157597.1136044557 4311078.820850829 4305395.372556127 3973716.29703763 1.0782516551109478 1.0590053470766971 1.0332601753178783 1.1474947718605144 1.1481482099838118 1.0309553901705073 1.0462742689265228 1.0848984926439513 1.083468232436664 1.0 21.922057444562135 -9.375719997893874 9.037725596721934 1.0000000005994845 1.0789795958048574 0.2676755639572841 0.03924224304060837 0.0 0.0 0.040885080661940784 0.0099160885930047 4.2099797036791985e-10 9.375719997893874 0.0789795952053729 SLMS(ph)S(ph)PEDLTKDFEELKAEEVDVTK ddPTM_KYSE-520_SHP099_60min_R1 16 SLMSSPEDLTKDFEELKAEEVDVTK 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 S(0.526)LMS(0.585)S(0.889)PEDLTKDFEELKAEEVDVTK;S(0.467)LMS(0.792)S(0.737)PEDLT(0.003)KDFEELKAEEVDVTK;S(0.536)LMS(0.582)S(0.882)PEDLTKDFEELKAEEVDVTK;S(0.005)LMS(0.983)S(0.918)PEDLT(0.094)KDFEELKAEEVDVTK;S(0.015)LMS(0.986)S(0.986)PEDLT(0.012)KDFEELKAEEVDVTK;S(0.063)LMS(0.942)S(0.945)PEDLT(0.05)KDFEELKAEEVDVTK;S(0.361)LMS(0.838)S(0.726)PEDLT(0.075)KDFEELKAEEVDVTK;S(0.104)LMS(0.953)S(0.925)PEDLT(0.018)KDFEELKAEEVDVTK;S(0.08)LMS(0.932)S(0.932)PEDLT(0.056)KDFEELKAEEVDVTK;S(0.054)LMS(0.664)S(0.669)PEDLT(0.614)KDFEELKAEEVDVTK;S(0.086)LMS(0.826)S(0.651)PEDLT(0.437)KDFEELKAEEVDVTK;S(0.005)LMS(0.984)S(0.851)PEDLT(0.159)KDFEELKAEEVDVTK;S(0.052)LMS(0.968)S(0.943)PEDLT(0.037)KDFEELKAEEVDVTK;S(0.15)LMS(0.929)S(0.899)PEDLT(0.022)KDFEELKAEEVDVTK;S(0.001)LMS(1)S(0.997)PEDLT(0.003)KDFEELKAEEVDVTK;S(0.632)LMS(0.689)S(0.654)PEDLT(0.025)KDFEELKAEEVDVTK 192.07 1.8277e-15 5999677200.0 3677198.9 4064158.9 3984299.6 3692314.0 3539782.3 3193225.2 2812584.7 3296535.8 5582952.7 3071753.9 True False 3473217.3467027294 3868910.6060171197 4241133.927320761 4043230.412425316 3818343.028403772 3173295.0970600527 3096908.2096574362 3285100.8867270434 4569229.224464526 3044540.5502343723 1.1408018022408528 1.2707699379202837 1.3930292132237403 1.3280264610415726 1.2541606739676472 1.0422903044650755 1.0172005130360418 1.0790136746492514 1.500794339596752 1.0 21.537793097649303 -6.096674614373952 6.006351212913549 1.1265390592871274 1.290281771171383 0.20955035811214873 0.14566470707205184 0.3789488448405239 19.392221435900154 0.04930274718665733 0.04955900513397944 8.00433737846483e-07 6.096674614373952 0.1637427118842556 SLMS(ph)SPEDLTKDFEELK ddPTM_KYSE-520_SHP099_60min_R1 1 SLMSSPEDLTKDFEELK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.068)LMS(0.506)S(0.426)PEDLTKDFEELK 109.66 0.00011127 50169000.0 105960.0 125220.0 103700.0 177260.0 113520.0 109380.0 90798.0 136800.0 160260.0 96788.0 True False 100082.18757397681 119204.24324094794 110384.66792586654 194106.7371048376 122453.37815955406 108697.31884754918 99976.7479430847 136325.47272935987 131160.82382583772 95930.53361992456 1.0432777114583875 1.2426100298079596 1.1506729271746685 2.0234093336109833 1.2764796935740255 1.1330836465291274 1.042178586634274 1.4210853164799384 1.3672479332335945 1.0 16.549702461642468 -5.992616340305254 24.999939425537203 1.2090895696757207 1.3795675105661922 0.07878613576766536 0.2731453996167521 538.4824591442067 1823202.7839852464 0.08922542921990433 0.10098133752637824 1.0171468528705907e-06 5.992616340305254 0.17047794089047152 SLMS(ph)SPEDLTKDFEELKAEEVDVTK ddPTM_KYSE-520_SHP099_60min_R1 7 SLMSSPEDLTKDFEELKAEEVDVTK 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.005)LMS(0.479)S(0.479)PEDLT(0.038)KDFEELKAEEVDVTK;S(0.02)LMS(0.49)S(0.49)PEDLTKDFEELKAEEVDVTK;S(0.006)LMS(0.515)S(0.459)PEDLT(0.02)KDFEELKAEEVDVTK;S(0.02)LMS(0.496)S(0.454)PEDLT(0.03)KDFEELKAEEVDVTK;S(0.02)LMS(0.488)S(0.488)PEDLT(0.005)KDFEELKAEEVDVTK;S(0.002)LMS(0.534)S(0.463)PEDLT(0.001)KDFEELKAEEVDVTK;S(0.054)LMS(0.553)S(0.357)PEDLT(0.036)KDFEELKAEEVDVTK 144.28 8.7051e-07 1119562000.0 714978.0 782926.0 819736.0 662472.0 719748.0 631233.0 556660.0 674450.0 1211572.0 638820.0 True False 675316.7450666924 745313.0597641148 872577.4941839739 725433.1397005302 776388.0727940698 627293.2407030072 612932.625278062 672110.4903678136 991581.0660446645 633160.5517944392 1.0665805744732175 1.1771312310153 1.3781299098798931 1.145733317788958 1.2262104305040953 0.9907332965157045 0.9680524529536003 1.0615166855594311 1.5660815621479043 1.0 19.272211847562883 SLMSS(ph)PEDLTK ddPTM_KYSE-520_SHP099_60min_R1 11 SLMSSPEDLTK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SLMS(0.058)S(0.942)PEDLTK;SLMS(0.002)S(0.998)PEDLTK;SLMSS(1)PEDLTK;SLMS(0.001)S(0.999)PEDLTK;SLMS(0.001)S(0.999)PEDLTK;SLMS(0.001)S(0.999)PEDLTK;SLMSS(1)PEDLTK;SLMS(0.056)S(0.944)PEDLTK;SLMSS(1)PEDLTK;S(0.001)LMS(0.215)S(0.784)PEDLTK;SLMS(0.003)S(0.997)PEDLTK 340.88 1.4987999999999997e-49 12819980000.0 20306700.0 17930520.0 16185570.0 18020680.0 18940580.0 20561090.0 19463470.0 22634470.0 22617570.0 21165350.0 True False 19180246.87059715 17069110.90494078 17228917.740027644 19733360.009085 20431095.888841506 20432760.610560946 21431027.49276184 22555956.306495003 18510789.430541314 20977841.46539313 0.914309839848802 0.8136733673528551 0.8212912547961602 0.9406763818688813 0.9739369954981506 0.9740163516951257 1.0216030819050819 1.075227703656035 0.8823972409686822 1.0 24.322362902308704 -5.487197456389524 2.720639891749367 0.992918898363941 0.8463596988365368 0.5795788516011511 0.05221676007916022 0.18542198817175123 2.7342007350093835 0.015844304101675977 0.02387990193016959 3.256885897149296e-06 5.487197456389524 -0.14655919952740415 SLMSS(ph)PEDLTKDFEELK ddPTM_KYSE-520_SHP099_60min_R1 1 SLMSSPEDLTKDFEELK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SLMS(0.044)S(0.956)PEDLTKDFEELK 221.85 2.0492e-18 157940000.0 246540.0 236280.0 191650.0 241630.0 215600.0 191980.0 212790.0 221370.0 303610.0 212270.0 True False 232863.93473469463 224928.7541364892 204004.065650842 264594.4425512917 232566.4934038046 190781.7816086348 234300.8898302713 220602.1191381465 248482.07738526486 210389.45294356113 1.1068232341340918 1.0691066067690589 0.9696496796613086 1.2576411927943534 1.1054094687255671 0.9068029739105493 1.1136532109959174 1.0485417213253794 1.181057671421972 1.0 17.682702856978548 SLMSS(ph)PEDLTKDFEELKAEEVDVTK ddPTM_KYSE-520_SHP099_60min_R1 3 SLMSSPEDLTKDFEELKAEEVDVTK 25 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SLMS(0.128)S(0.872)PEDLT(0.001)KDFEELKAEEVDVTK;SLMS(0.01)S(0.966)PEDLT(0.024)KDFEELKAEEVDVTK;S(0.002)LMS(0.151)S(0.796)PEDLT(0.051)KDFEELKAEEVDVTK 218.16 2.1618000000000003e-21 274105000.0 313613.0 370314.0 353899.0 303190.0 326355.0 318602.0 251209.0 296168.0 538220.0 296151.0 True False 296216.26171798405 352523.5595873541 376711.8957984211 332005.0864426025 352037.28179405665 316613.4867385884 276603.6572835782 295140.6623341309 440492.815422079 293527.3325419917 1.0091607454498557 1.2009905739763516 1.2833963111238682 1.131087464895986 1.1993339044284557 1.078650781842587 0.9423437840972018 1.0054963528546643 1.5006875564443818 1.0 18.16313532423483 -6.26676749221544 23.49087864303015 1.0955859712147025 1.1715211851541985 0.03170589380910893 0.15725263719782023 706.2066789796833 3113553.5198227526 0.054914919133327064 0.049935421790058755 5.410439035336993e-07 6.26676749221544 0.07593521393949598 SLPAFPT(ph)SSLLTQSQK ddPTM_KYSE-520_SHP099_60min_R1 1 SLPAFPTSSLLTQSQK 16 0 Q99698 Q99698 LYST Lysosomal-trafficking regulator 1 S(0.041)LPAFPT(0.896)S(0.059)S(0.004)LLTQSQK 184.22 2.3655999999999997e-11 655100000.0 414540.0 406600.0 321910.0 339540.0 378190.0 443970.0 396660.0 464420.0 474740.0 391610.0 True False 391544.6398349976 387066.3256809578 342660.8336742109 371809.77951357677 407951.40139325085 441199.01854768995 436758.2638285415 462809.0354164431 388539.18322150374 388140.6400679696 1.0087700163694064 0.9972321517612182 0.8828264765426406 0.9579254041742883 1.051040162457124 1.136698848310316 1.1252577512935986 1.1923745870450408 1.0010268008870813 1.0 18.566219972118116 -5.90522996749054 3.4765056352405157 1.1046723477537714 0.9584839238108325 0.471130901133165 0.06385719901113691 0.189393334971896 4.506422831755012 0.02062181863585786 0.02363412173223551 1.243855791192747e-06 5.90522996749054 -0.14618842394293896 SLPAPVAQRPDS(ph)PGGGLQAPGQK ddPTM_KYSE-520_SHP099_60min_R1 6 SLPAPVAQRPDSPGGGLQAPGQK 23 1 Q5JVS0-2;Q5JVS0 Q5JVS0-2 HABP4 Intracellular hyaluronan-binding protein 4 1 SLPAPVAQRPDS(1)PGGGLQAPGQK;SLPAPVAQRPDS(1)PGGGLQAPGQK;SLPAPVAQRPDS(1)PGGGLQAPGQK;SLPAPVAQRPDS(1)PGGGLQAPGQK;SLPAPVAQRPDS(1)PGGGLQAPGQK;SLPAPVAQRPDS(1)PGGGLQAPGQK 175.39 1.3736e-11 16315020000.0 8351500.0 9416820.0 6941540.0 6125160.0 6584180.0 8867240.0 6339660.0 8499180.0 9500710.0 9379800.0 True False 7888225.646697497 8964421.832265012 7389002.775256692 6707293.364803495 7102317.507140367 8811896.266024321 6980534.701919156 8469698.328303514 7775620.557409051 9296702.26937397 0.8484971786913729 0.9642582469050788 0.7947982586898805 0.7214701697933537 0.7639609510285661 0.9478518307565102 0.7508613806978696 0.9110433014731636 0.8363848095925581 1.0 23.14828762282085 -8.78702747354782 0.7427150409544492 1.0034059662827033 0.8307335954020806 0.2817396773179047 0.07845194388015575 4.4409367047356785 3.1268197432751004 0.12204317786530669 0.02905544481894718 1.632948643998994e-09 8.78702747354782 -0.1726723708806227 SLPELDRDKS(ph)DS(ph)DTEGLLFSR ddPTM_KYSE-520_SHP099_60min_R1 3 SLPELDRDKSDSDTEGLLFSR 21 2 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 2 SLPELDRDKS(0.999)DS(0.684)DT(0.317)EGLLFSR;SLPELDRDKS(0.999)DS(0.893)DT(0.108)EGLLFSR;SLPELDRDKS(0.996)DS(0.943)DT(0.061)EGLLFSR 115.45 9.388799999999999e-05 536640000.0 1409940.0 1371150.0 1198120.0 1114970.0 1250920.0 1210380.0 1090350.0 1168070.0 1746680.0 1081170.0 True False 1331727.8175542937 1305277.895861889 1275352.7322597804 1220936.4135720455 1349360.2872388067 1202825.5694523368 1200573.2187905284 1164018.2377995877 1429526.9422196078 1071591.674937533 1.2427567782587756 1.2180739421459004 1.1901480406089617 1.1393672068637697 1.259211245101793 1.122466325172276 1.1203644511894086 1.0862516619191191 1.3340220679700037 1.0 20.03132384754227 -13.999999998863737 0.2392473922526306 1.8914238982056745e-09 1.201958369195487 0.35275826386203535 0.07392411351694085 195.45980270108063 1.9519800607412707 95.67972016680453 0.11636617987547354 1.0000000026163414e-14 13.999999998863737 1.201958367304063 SLPELDRDKS(ph)DSDTEGLLFSR ddPTM_KYSE-520_SHP099_60min_R1 1 SLPELDRDKSDSDTEGLLFSR 21 2 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 SLPELDRDKS(0.382)DS(0.213)DT(0.121)EGLLFS(0.284)R 95.366 0.0012565999999999999 778600000.0 344980.0 337750.0 315370.0 266700.0 303000.0 277250.0 235600.0 247980.0 416270.0 257620.0 True False 325843.2716994193 321523.98302691407 335699.2548098408 292047.0878137211 326844.37616582925 275519.57990933454 259416.74723441846 247119.8152589673 340685.8613127505 255337.68722532698 1.2761268234245167 1.2592108376981572 1.3147266212746629 1.1437680468845137 1.2800475312420294 1.0790400073851916 1.015975158439858 0.967815671647767 1.3342560787437014 1.0 17.962046966198137 -6.2684840654739045 23.34805170455088 1.073440694564745 1.2521858394992502 0.4220738622736816 0.10245635716711736 220.70709503756274 731481.1335525201 0.034866275951671806 0.03145849546632669 5.389096179289922e-07 6.2684840654739045 0.17874514493450522 SLPELDRDKSDS(ph)DTEGLLFSR ddPTM_KYSE-520_SHP099_60min_R1 5 SLPELDRDKSDSDTEGLLFSR 21 2 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 SLPELDRDKS(0.017)DS(0.983)DTEGLLFSR;SLPELDRDKS(0.074)DS(0.925)DT(0.001)EGLLFSR;SLPELDRDKS(0.128)DS(0.87)DT(0.002)EGLLFSR;SLPELDRDKS(0.191)DS(0.806)DT(0.002)EGLLFS(0.001)R;SLPELDRDKS(0.006)DS(0.963)DT(0.01)EGLLFS(0.021)R 165.47 3.3664e-09 2603900000.0 1507040.0 1515070.0 1499390.0 1149280.0 1303984.0 1185664.0 1007995.0 1174002.0 1886820.0 1125796.0 True False 1423441.4869902397 1442283.763033565 1596043.078508823 1258507.2256563692 1406600.122145949 1178263.8311762693 1109892.9716831814 1169929.6610761255 1544221.0508615186 1115822.323296034 1.2756883038381306 1.292574752199969 1.4303738553950616 1.1278742138254212 1.2605950721535886 1.0559600812571925 0.9946861149046222 1.0484909977605248 1.3839309526448935 1.0 20.08967588886844 -5.68471718445021 1.5452631280260003 1.1010807850672653 1.3222539269913742 0.35644049597912253 0.12278084922984411 0.4313139668493268 2.131706178036697 0.0445131424799322 0.06499906482109775 2.0667255835834755e-06 5.68471718445021 0.22117314192410897 SLPESTSAPASGPSDGS(ph)PQPCTHPPGPVK ddPTM_KYSE-520_SHP099_60min_R1 2 SLPESTSAPASGPSDGSPQPCTHPPGPVK 29 0 H3BNC2;Q7LC14;O00221 H3BNC2 NFKBIE NF-kappa-B inhibitor epsilon 1 SLPESTSAPASGPSDGS(0.996)PQPCT(0.003)HPPGPVK;SLPESTSAPASGPS(0.003)DGS(0.993)PQPCT(0.004)HPPGPVK 160.86 3.8158e-10 629780000.0 205908.0 229832.0 174858.0 194268.0 164706.0 229839.0 229014.0 262697.0 234451.0 245429.0 True False 194485.8727725785 218790.52573513464 186129.62646269187 212731.172311196 177667.42515105288 228404.4895465519 252164.9700812529 261785.76542094082 191880.60842875 243254.69000087268 0.7995154081998616 0.8994298351836494 0.7651635677076735 0.8745203322099682 0.730376154928053 0.9389520487589879 1.0366294277012633 1.0761797251267864 0.7888053810105846 1.0 17.89210809517094 -6.452422459830263 6.457919675532192 0.9827186842104023 0.8198021684561688 0.4610807315577963 0.08385288077215709 0.21070674995927513 15.746176144494797 0.028902612193547256 0.025245136762971725 3.528397780110342e-07 6.452422459830263 -0.1629165157542335 SLPIYS(ph)PEKVEEYR ddPTM_KYSE-520_SHP099_60min_R1 2 SLPIYSPEKVEEYR 14 1 E9PDF6;O43795-2;O43795;C9K0I9;C9JUP5;C9JYW1;E7EQD9 E9PDF6 MYO1B Unconventional myosin-Ib 1 SLPIYS(1)PEKVEEYR;SLPIYS(1)PEKVEEYR 188.41 6.8036e-11 579110000.0 684090.0 658620.0 524150.0 501240.0 597330.0 623120.0 610650.0 597690.0 790430.0 640630.0 True False 646142.1640003936 626978.906591225 557937.5476696524 548877.6988966995 644336.4726572097 619230.8769453726 672380.461369684 595616.7528918952 646907.8371187882 634954.5166025977 1.017619604405142 0.9874390845283735 0.8787047466879454 0.8644362462897929 1.014775792295819 0.9752365890058451 1.058942717609662 0.938046328229644 1.0188254752169466 1.0 19.276293726129435 -5.812696321187278 24.999981182704918 0.9994853826798529 0.9364807773184654 0.27194111093837425 0.0512004099142486 151.5474747859039 73914.52083571831 0.016803299151969788 0.019053174556034277 1.539230565379696e-06 5.812696321187278 -0.06300460536138752 SLPSS(ph)PERR ddPTM_KYSE-520_SHP099_60min_R1 2 SLPSSPERR 9 1 O95685 O95685 PPP1R3D Protein phosphatase 1 regulatory subunit 3D 1 S(0.025)LPS(0.168)S(0.807)PERR;S(0.005)LPS(0.04)S(0.956)PERR 80.979 0.0064432000000000005 854080000.0 284930.0 234210.0 220768.0 150727.0 179616.0 212326.0 151520.0 196530.0 234802.0 178761.0 True False 269124.36490612687 222958.20004362296 234999.05852128935 165052.04876227514 193750.7573247576 211000.79467566946 166837.12029269573 195848.28330044693 192167.87567674005 177177.31661395374 1.518954965846524 1.2583902065150914 1.3263495746090435 0.9315642200513852 1.093541549378554 1.1909018530595126 0.9416392768619025 1.1053801188736525 1.0846076650740162 1.0 17.43483438700177 -4.537659911879949 1.0710062331024541 1.0570482955779406 1.5999971412799117 0.6979683347381622 0.09574181132924321 0.6470234174203292 0.8468787843612349 0.030937553208272274 0.36088864456054487 2.8996133334184864e-05 4.537659911879949 0.5429488457019711 SLPSSSQLKGS(ph)PQAISR ddPTM_KYSE-520_SHP099_60min_R1 1 SLPSSSQLKGSPQAISR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 SLPSSSQLKGS(0.803)PQAIS(0.197)R 149.95 8.7822e-06 680030000.0 427420.0 470370.0 454940.0 305630.0 343300.0 415770.0 339860.0 368210.0 528460.0 338590.0 True False 403710.16055935354 447772.7191602357 484266.16032973665 334676.98330898955 370315.75689019513 413175.02520794905 374216.3655139623 366932.76545086043 432504.9853925008 335590.35601903364 1.2029849884495976 1.3342836321996079 1.4430276426128008 0.9972783106139311 1.1034755625372976 1.2311886137291592 1.1150986874388544 1.0933948454408182 1.2887884816569952 1.0 18.35634173156309 -5.2591057558584735 24.999992387971147 1.126284634632327 1.327517239306828 0.47403258519136937 0.10031283600122869 187.44206661940336 2008047.1051579602 0.027451178996500684 0.04479988012855964 5.506735845265565e-06 5.2591057558584735 0.201232604674501 SLPTPAVLLS(ph)PTKEPPPLLAK ddPTM_KYSE-520_SHP099_60min_R1 3 SLPTPAVLLSPTKEPPPLLAK 21 1 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;A0A3B3ISX8 Q8WX93-3 PALLD Palladin 1 SLPT(0.002)PAVLLS(0.76)PT(0.238)KEPPPLLAK;SLPT(0.002)PAVLLS(0.953)PT(0.045)KEPPPLLAK;SLPTPAVLLS(0.988)PT(0.011)KEPPPLLAK 139.36 1.1861e-06 962149000.0 590613.0 659320.0 542008.0 474474.0 600207.0 803766.0 645651.0 888858.0 793026.0 744342.0 True False 557850.5195321742 627645.2775405037 576946.7029234625 519567.8663041896 647439.8761893188 798749.3982521411 710919.7040265265 885774.7590590161 649032.4689586214 737747.708969313 0.7561535098652246 0.8507586942118324 0.782037945911752 0.7042622565782869 0.8775898160278116 1.0826863825413324 0.9636352582100634 1.2006472514791102 0.8797485387862022 1.0 19.492768009899255 -6.0645699980380945 4.139343333823103 1.032670096067393 0.7796127688224639 0.662827812368258 0.08476891803285513 0.13028533265107806 4.392612083266217 0.026990630376342105 0.027785884701510485 8.618466581353279e-07 6.0645699980380945 -0.253057327244929 SLPTPAVLLS(ph)PTKEPPPLLAKPK ddPTM_KYSE-520_SHP099_60min_R1 1 SLPTPAVLLSPTKEPPPLLAKPK 23 2 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;A0A3B3ISX8 Q8WX93-3 PALLD Palladin 1 SLPTPAVLLS(0.979)PT(0.021)KEPPPLLAKPK 130.9 2.6928e-05 512060000.0 215420.0 254850.0 215480.0 186450.0 192760.0 261880.0 202840.0 233850.0 271650.0 214890.0 True False 203470.2231708766 242606.62346235118 229370.1855801903 204170.15194176338 207929.11534562765 260245.50978054636 223345.04672762938 233038.82893100017 222325.20773922864 212986.2417818902 0.9553209703528244 1.1390718077968338 1.0769248927124513 0.958607233188541 0.9762560886846329 1.2218888300167872 1.0486360285954395 1.0941496830093136 1.0438477428363757 1.0 17.700400714493032 SLPTTVPES(ph)PNYR ddPTM_KYSE-520_SHP099_60min_R1 10 SLPTTVPESPNYR 13 0 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR;SLPTTVPES(1)PNYR 359.59 2.7792999999999996e-64 121872400000.0 23621900.0 21760400.0 17900400.0 15108040.0 15425740.0 18811800.0 16283200.0 19621800.0 22880300.0 18564600.0 True False 22311546.11790977 20714997.720973704 19054288.425652657 16543903.579202147 16639657.97754545 18694388.578317102 17929264.76471765 19553736.55556256 18725814.285425648 18400132.087040238 1.2125753235013166 1.1258070117640022 1.0355517197114668 0.8991187400689646 0.9043227460994836 1.0159920858113902 0.9744095683609666 1.0626954449601391 1.0176999924155326 1.0 24.133212787050017 -4.682329614146501 2.3489233135742937 0.9820545861760598 1.2029027665003955 0.7097129628545549 0.048372512376168623 0.185213811198366 1.9284225155643409 0.014732413861875618 0.05820350715281692 2.0781188697270147e-05 4.682329614146501 0.22084818032433573 SLQEEHVAVAQLR ddPTM_KYSE-520_SHP099_60min_R1 1 SLQEEHVAVAQLR 13 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 86.944 0.0026996 0.0 375860.0 375690.0 288670.0 376410.0 322090.0 360560.0 301760.0 334800.0 293780.0 323220.0 False True 355010.29654166545 357641.2884778135 307278.1300883303 412183.89322820696 347436.65055858734 358309.6112970586 332264.8456937952 333638.65694290784 240436.9575911304 320356.5222613548 1.1081725261458522 1.1163852259141485 0.9591755083345711 1.2866411781431975 1.0845312219837995 1.1184714104392128 1.0371720961021211 1.0414604784313308 0.7505293037079981 1.0 18.289318837619877 -7.590220848286204 6.163725886583952 0.8761917326506227 1.0995049756159163 0.46672449337877164 0.09530889529330977 0.1726804346835609 11.806703980951623 0.06384935686012805 0.02346620610040894 2.5690890123264486e-08 7.590220848286204 0.22331324296529365 SLQEEQSRPPTAVSS(ph)PGGPAR ddPTM_KYSE-520_SHP099_60min_R1 1 SLQEEQSRPPTAVSSPGGPAR 21 1 A0A087X0M4;Q9BWU0 A0A087X0M4 SLC4A1AP Kanadaptin 1 SLQEEQSRPPTAVS(0.174)S(0.825)PGGPAR 153.87 2.9565000000000003e-07 1338900000.0 666700.0 631070.0 505770.0 470340.0 489120.0 576930.0 393360.0 592210.0 605780.0 705010.0 True False 629716.8219664998 600752.4499446178 538372.7434606121 515040.9721871229 527610.9612878894 573329.1658686826 433124.6676236456 590155.7617328526 495785.6224710839 698764.1598894802 0.9011864919719104 0.8597356367556624 0.7704641628239257 0.7370741113404903 0.7550629977521154 0.8204902294350113 0.6198438507380668 0.8445707373231539 0.7095178186435601 1.0 19.41444608773482 -4.661300891716985 3.3365764513802296 0.7691611246226697 0.8939654839679153 0.1432711446781315 0.09424548558205847 0.3696594142438662 7.824591912863344 0.022783441320639544 0.07317098885584954 2.181218177483456e-05 4.661300891716985 0.12480435934524559 SLQTTS(ph)PPVVAPGNENGLAVPVPLRK ddPTM_KYSE-520_SHP099_60min_R1 2 SLQTTSPPVVAPGNENGLAVPVPLRK 26 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 S(0.002)LQT(0.031)T(0.175)S(0.792)PPVVAPGNENGLAVPVPLRK;S(0.001)LQT(0.01)T(0.051)S(0.939)PPVVAPGNENGLAVPVPLRK 101.86 0.0015887 1696480000.0 675970.0 763510.0 548020.0 454560.0 473050.0 668900.0 448630.0 773850.0 885850.0 804920.0 True False 638472.5965872122 726829.8335481253 583346.2460630018 497761.2457315523 510276.34371368174 664725.1469841441 493981.8986068639 771165.6949679472 725001.9704612395 797789.0350182843 0.8003025468663896 0.9110551808116382 0.731203639630911 0.623925905073569 0.6396131324391878 0.8332091791270476 0.6191886287275714 0.9666285961805342 0.9087640198572337 1.0 19.6056477692915 -7.28069372431763 24.596962198018183 0.9532722822586477 0.7390192955679407 0.5503493925266962 0.09171430244643149 582.8787587716697 744608.8333429991 0.05338458703700324 0.025711205778183262 5.239698233685321e-08 7.28069372431763 -0.21425298669070703 SLRQS(ph)FR ddPTM_KYSE-520_SHP099_60min_R1 7 SLRQSFR 7 1 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 SLRQS(1)FR;SLRQS(1)FR;SLRQS(1)FR;SLRQS(1)FR;SLRQS(1)FR;SLRQS(1)FR;SLRQS(1)FR 118.67 0.0017021 6889170000.0 2072884.0 2331330.0 2446060.0 2612480.0 2939660.0 2189505.0 2519020.0 2461900.0 2841740.0 2534570.0 True False 1957896.9923281947 2219329.4074023273 2603736.941434375 2860769.313729245 3170994.5176225747 2175839.487139357 2773667.124866062 2453360.243511779 2325751.650435766 2512115.681665621 0.7793817006986079 0.8834503218143337 1.0364717518534041 1.1387888442432135 1.2622804517983397 0.866138252716411 1.1041160027419687 0.9766111733696573 0.9258139135112244 1.0 21.260471470465568 -4.615425395703059 2.897777925591875 1.0464645338003336 0.7910917755197546 0.39378244361152626 0.10629438801799225 0.27173662130175436 4.336868418657066 0.02924482917582924 0.11077798718738223 2.4242343704153642e-05 4.615425395703059 -0.2553727582805789 SLRQS(ph)FRR ddPTM_KYSE-520_SHP099_60min_R1 2 SLRQSFRR 8 2 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 SLRQS(1)FRR;SLRQS(1)FRR 72.652 0.015022 1564610000.0 515886.0 583295.0 588791.0 549132.0 531394.0 446155.0 443794.0 492662.0 727603.0 431348.0 True False 487268.7751867551 555272.632656355 626745.409958909 601321.3401774436 573211.684581731 443370.3811522053 488657.0285320524 490953.0705101753 595488.6365790023 427526.592303666 1.139739103855919 1.2988025602439084 1.4659799442691526 1.4065121351570422 1.3407626447119037 1.0370591891446268 1.1429862781142894 1.1483568024733732 1.392869232695671 1.0 18.705654633362727 -6.234118037811361 23.077241109401964 1.1534473647605328 1.340371404547461 0.3534747738073889 0.1251734930635553 337.86652820810167 285381.72258308326 0.04239595609244933 0.042379834418439226 5.832865500486597e-07 6.234118037811361 0.1869240397869283 SLS(ph)AIDR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSAIDR 7 0 O95831-3;O95831;O95831-6;O95831-4 O95831-3 AIFM1 Apoptosis-inducing factor 1, mitochondrial 1 S(0.015)LS(0.985)AIDR 81.163 0.013640000000000001 210890000.0 146230.0 217190.0 145500.0 181140.0 197580.0 199840.0 221890.0 166040.0 219980.0 163310.0 True False 138118.33039772205 206755.86639116373 154879.16280823108 198355.4911382733 213128.42192357918 198592.72443311603 244320.80663771302 165464.04599402743 180037.1772445264 161863.20045325722 0.853302850870095 1.2773494272459451 0.9568522207304125 1.2254514341915184 1.3167194354662863 1.2269170748941514 1.5094277510487497 1.0222462272504618 1.112279855707644 1.0 17.304415501101428 -5.285272902798793 22.854604827794457 1.221434874968499 1.0539863072745403 0.16581599439290085 0.17096477692690742 458.5212514162858 439687.134518665 0.04757155000826388 0.070627878496689 5.184741367725378e-06 5.285272902798793 -0.16744856769395855 SLS(ph)APGNLLTK ddPTM_KYSE-520_SHP099_60min_R1 2 SLSAPGNLLTK 11 0 Q96RR4-6;Q96RR4-5;Q96RR4-2;Q96RR4-3;Q96RR4-4;Q96RR4-7;Q96RR4;F5GZ00 Q96RR4-6 CAMKK2 Calcium/calmodulin-dependent protein kinase kinase 2 1 S(0.005)LS(0.995)APGNLLTK;S(0.002)LS(0.998)APGNLLTK 155.39 3.5746999999999995e-05 451629000.0 1748320.0 1689260.0 1386360.0 1201370.0 1202920.0 1750220.0 1337610.0 1562760.0 1912830.0 1638770.0 True False 1651337.2044104864 1608105.4139690464 1475726.9838544289 1315547.843594939 1297582.9603214478 1739296.2277688535 1472828.672615581 1557339.1503109254 1565508.2905202615 1624251.7727437692 1.0166756362044556 0.9900592019995474 0.9085580256819147 0.8099408390194632 0.7988804334992378 1.0708292008391933 0.9067736279133644 0.9588040329980299 0.9638335120150275 1.0 20.631343849098158 -6.265356258244535 24.99894011609672 0.9728936663393171 0.9044944732519584 0.20164537639761249 0.07415912476596485 713.2358430812541 4552110.867525385 0.028211103672627642 0.02577121664281422 5.428048778696256e-07 6.265356258244535 -0.06839919308735865 SLS(ph)APLHPEFEEVYR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSAPLHPEFEEVYR 15 0 Q53HC0-2;Q53HC0 Q53HC0-2 CCDC92 Coiled-coil domain-containing protein 92 1 S(0.026)LS(0.974)APLHPEFEEVYR 171.98 1.8150999999999998e-08 138170000.0 190270.0 161880.0 164450.0 146990.0 138590.0 163220.0 165470.0 190570.0 194260.0 146290.0 True False 179715.34380615863 154103.04181316623 175050.71012930316 160959.88540584483 149496.24453076665 162201.28343661508 182197.3224315758 189908.95714937238 158987.28089608924 144993.98441189795 1.239467585742209 1.0628236918808391 1.2072963636340956 1.1101142303158664 1.031051358007231 1.1186759512438442 1.2565853898737678 1.3097712840960372 1.0965094968660163 1.0 17.1456335206139 -6.712834099087643 24.99684509485707 1.191531049265563 1.123616869602913 0.005928208446085548 0.09839747744463934 274.8398398347755 141344.63169750094 0.036622994998798564 0.028367986717872436 1.9371618203146522e-07 6.712834099087643 -0.06791417966265012 SLS(ph)DS(ph)ESDDSK ddPTM_KYSE-520_SHP099_60min_R1 2 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 2 S(0.002)LS(0.998)DS(0.744)ES(0.256)DDSK;S(0.012)LS(0.988)DS(0.989)ES(0.011)DDSK 203.29 3.1358000000000004e-11 2401300000.0 5272300.0 4945600.0 4657800.0 5054900.0 4919200.0 4798600.0 4896600.0 4896200.0 5852700.0 4901200.0 True False 4979835.008930521 4708005.952503058 4958049.240743504 5535316.176188894 5306313.053580676 4768650.157449705 5391596.114210755 4879216.224981677 4789997.214560593 4857779.181075906 1.0251258493449227 0.9691683744793693 1.020641131663253 1.139474638483449 1.0923331126808091 0.9816523105921704 1.1098890898981988 1.0044129309107506 0.9860467172366815 1.0 22.21186548053976 -9.8313821571839 12.909367091476598 0.9999999985808717 1.0383471780757887 0.036817160748250255 0.05534860733976632 0.0 0.0 0.056216311232417944 0.013634458181991516 1.4744085573063312e-10 9.8313821571839 0.03834717949491695 SLS(ph)DSESDDSK ddPTM_KYSE-520_SHP099_60min_R1 7 SLSDSESDDSK 11 0 Q13185;S4R2Y4 Q13185 CBX3 Chromobox protein homolog 3 1 S(0.003)LS(0.996)DSESDDSK;SLS(0.999)DS(0.001)ESDDSK;SLS(1)DSESDDSK;S(0.004)LS(0.884)DS(0.112)ESDDSK;S(0.008)LS(0.991)DSES(0.001)DDSK;SLS(0.998)DS(0.001)ESDDSK;SLS(0.979)DS(0.01)ES(0.011)DDSK 299.09 9.419899999999999e-29 4994240000.0 9912880.0 9247790.0 8497130.0 8332200.0 8858190.0 8993670.0 8714650.0 9195770.0 10554480.0 8952650.0 True False 9362992.785563631 8803512.287184212 9044868.595688699 9124089.78283272 9555279.156793354 8937537.169497503 9595611.868787875 9163872.02017885 8638052.488789022 8873336.486056302 1.0551828841695323 0.9921310096848224 1.0193311850510736 1.0282591894458704 1.076853015977549 1.0072352359839039 1.081398398884858 1.0327425354125928 0.9734841569868325 1.0 23.081045247334135 -7.734847768992059 11.639219851916211 0.9867556417194304 1.0361670382002892 0.345363412255804 0.027474087594509526 0.6638283617615788 290.28569169619703 0.018831407831385566 0.006989102646490502 1.8414173508967742e-08 7.734847768992059 0.049411396480858794 SLS(ph)EEKEDHSDGLAGLK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSEEKEDHSDGLAGLK 17 1 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6;V9GXZ1 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 S(0.001)LS(0.999)EEKEDHSDGLAGLK 172.91 1.4134e-08 1091000000.0 1104800.0 1109500.0 1108200.0 1063900.0 1200200.0 855890.0 1045400.0 1208500.0 1359100.0 1157600.0 True False 1043514.5416358014 1056197.9546065475 1179636.3451826938 1165012.7361268003 1294648.9117961314 850548.0730337242 1151079.2341208023 1204307.9955660212 1112321.7001228991 1147344.5645991727 0.9095040616681315 0.920558642272849 1.0281447976308689 1.0153991852777025 1.1283871922541593 0.7413187801441888 1.0032550548778991 1.0496480592878816 0.9694748504007522 1.0 20.129867288478714 -4.676891214452898 7.514111254926489 0.9908026268929185 0.913208273820123 0.09785698091260187 0.09347143981412123 0.5748603213641363 43.40865585256744 0.024160165187695697 0.06447782834576346 2.1043054769817962e-05 4.676891214452898 -0.0775943530727955 SLS(ph)EINKPNFYNNDFDDDFSHR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSEINKPNFYNNDFDDDFSHR 22 1 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 S(0.209)LS(0.791)EINKPNFYNNDFDDDFSHR 128.58 3.1215e-05 408170000.0 252550.0 233850.0 163690.0 243530.0 195040.0 199960.0 230420.0 219920.0 282220.0 212760.0 True False 238540.5480540563 222615.4949839937 174241.71931326037 266675.0179800355 210388.53837420236 198711.97546860424 253713.10228249026 219157.14884971365 230975.96218724523 210875.111924775 1.1311934626934559 1.0556745789109852 0.8262792025235165 1.264611150865285 0.9976925984952353 0.9423206638984041 1.2031438891328095 1.0392746059473015 1.095321112477421 1.0 17.68602930867947 -6.745974496553521 24.99984639726891 1.087707852582799 1.0362533359594597 0.038093516469273836 0.11805059761035375 936.5203145379928 1513937.4724031035 0.044669881572471065 0.03446741770729964 1.794839023605638e-07 6.745974496553521 -0.05145451662333933 SLS(ph)ELCLAVPAPGIR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSELCLAVPAPGIR 15 0 A0A5F9ZHW8;O94827-5;O94827-3;O94827;O94827-7;O94827-2;O94827-6 A0A5F9ZHW8 PLEKHG5 Pleckstrin homology domain-containing family G member 5 1 S(0.006)LS(0.994)ELCLAVPAPGIR;S(0.001)LS(0.999)ELCLAVPAPGIR 216.15 3.608e-14 783930000.0 248570.0 272750.0 227030.0 155203.0 207423.0 272490.0 198014.0 224200.0 288200.0 255260.0 True False 234781.32658798987 259646.6805939036 241664.71706084354 169953.44645651645 223746.01002457002 270789.2888349666 218031.18755040795 223422.30252867332 235870.1449307779 252998.59498927474 0.9279945866811744 1.026277164127772 0.9552018147416523 0.6717564833264043 0.8843764924230317 1.0703193385182477 0.8617881358576353 0.8830970090491798 0.9322982403944853 1.0 17.948769847468515 -8.02557193377424 19.04010558790317 1.0000000086795502 0.9102358236055713 0.06690710960726032 0.10102199411036196 310.1386213006566 230924.84540084208 0.1031281887347948 0.026627579037222262 9.428184360804202e-09 8.02557193377424 -0.08976418507397887 SLS(ph)ELESLK ddPTM_KYSE-520_SHP099_60min_R1 11 SLSELESLK 9 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 SLS(1)ELESLK;S(0.001)LS(0.999)ELESLK;SLS(1)ELESLK;SLS(1)ELESLK;SLS(0.999)ELES(0.001)LK;S(0.001)LS(0.999)ELESLK;SLS(1)ELESLK;SLS(1)ELESLK;SLS(1)ELESLK;S(0.003)LS(0.997)ELES(0.001)LK;SLS(0.999)ELESLK 252.14 6.5719e-14 3292575000.0 3861170.0 3530080.0 3005610.0 3171700.0 3195580.0 3764690.0 3435200.0 4004240.0 3949690.0 3814910.0 True False 3646983.20304843 3360489.658041897 3199356.4297460304 3473137.4143936243 3447053.9656369616 3741193.1732691536 3782463.540321195 3990350.226036647 3232525.8595823827 3781112.8653550674 0.9645264060918102 0.8887567702177884 0.8461414783622422 0.9185489928683939 0.9116506405352341 0.9894423431652403 1.0003572162519938 1.0553375072716669 0.8549138771288253 1.0 21.850379483409384 -6.209733323376387 4.2583788233278135 0.9850158442782515 0.9010590732615111 0.31177777843562193 0.054679170182980165 0.2557415045865876 9.915786021466545 0.01850185611588509 0.01809876639876001 6.169737355885603e-07 6.209733323376387 -0.08395677101674037 SLS(ph)ELESLKLPAESNEK ddPTM_KYSE-520_SHP099_60min_R1 8 SLSELESLKLPAESNEK 17 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 SLS(1)ELESLKLPAESNEK;S(0.01)LS(0.99)ELESLKLPAESNEK;SLS(1)ELESLKLPAESNEK;S(0.021)LS(0.976)ELES(0.003)LKLPAESNEK;SLS(1)ELESLKLPAESNEK;S(0.036)LS(0.964)ELESLKLPAESNEK;SLS(1)ELESLKLPAESNEK;S(0.001)LS(0.999)ELESLKLPAESNEK 249.51 8.098699999999999e-24 18014560000.0 6906330.0 6882420.0 6110670.0 5226060.0 5583800.0 6136230.0 5336920.0 6213710.0 7745550.0 6493850.0 True False 6523222.107472472 6551778.212476966 6504573.565617694 5722743.171127769 6023213.292523948 6097931.512451054 5876427.956919828 6192156.090300817 6339153.3694260325 6436319.541138858 1.013501903654435 1.017938617031074 1.0106045114824673 0.8891328552831878 0.9358163860612467 0.9474252285759062 0.9130105985819404 0.9620647406833319 0.9849034574663718 1.0 22.617804522012733 -5.135706188752445 8.779125462780822 0.9440214394077804 1.0152862945381849 0.5008028009081603 0.030327078932557545 0.24476677086585405 16.296230392986473 0.008209080442050265 0.014264724493526225 7.316338849974547e-06 5.135706188752445 0.07126485513040448 SLS(ph)ESSVIMDR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSESSVIMDR 11 0 H3BSS6;Q9H2Y7;A0A0C4DGM5;Q9H2Y7-2;H3BNX5 H3BSS6 ZNF106 Zinc finger protein 106 1 SLS(0.998)ES(0.001)S(0.001)VIMDR;SLS(0.999)ESSVIMDR 151.55 5.0886e-05 1636760000.0 3443800.0 3124800.0 2881600.0 2814600.0 3205500.0 3310900.0 2844100.0 3182800.0 3915900.0 3202200.0 True False 3252765.548954902 2974679.917579579 3067352.546723016 3082098.73775965 3457754.613199889 3290235.4449840025 3131609.3837411255 3171759.609671104 3204871.271805802 3173830.9992739023 1.024870432514856 0.937252146777858 0.9664511271787168 0.9710973074699825 1.0894576976502346 1.036676321372099 0.9866969553380642 0.9993473535285047 1.0097800647038235 1.0 21.59779387865646 SLS(ph)ESYELSSDLQDK ddPTM_KYSE-520_SHP099_60min_R1 2 SLSESYELSSDLQDK 15 0 A0A2R8Y7T6;A0A3B3IRZ4;Q6DN90;Q6DN90-3;A0A2R8Y695 A0A2R8Y7T6 IQSEC1 IQ motif and SEC7 domain-containing protein 1 1 SLS(1)ESYELSSDLQDK;S(0.007)LS(0.993)ESYELSSDLQDK 255.21 9.3054e-20 192177000.0 400810.0 410880.0 337380.0 325352.0 349875.0 490290.0 418510.0 548170.0 564360.0 485440.0 True False 378576.27030507365 391140.7080565466 359128.05462708644 356273.3562593541 377408.1719835627 487229.9182461586 460817.07506399177 546268.5262138398 461886.45035785495 481139.3792666053 0.7868328526385279 0.8129467778188463 0.7464116846442725 0.7404784800662484 0.7844050772955671 1.0126585751281407 0.9577621265721576 1.1353644073917002 0.9599847159920741 1.0 18.87609535730666 -6.256946006458892 5.006798716982499 1.0196077467185864 0.7714915384971978 0.8523167547905282 0.049722567422276605 0.06529070274344645 5.137301826203631 0.017021887527883472 0.01603764288049302 5.534189085913596e-07 6.256946006458892 -0.2481162082213887 SLS(ph)FEMQQDELIEKPMSPMQYAR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSFEMQQDELIEKPMSPMQYAR 23 1 Q9Y6Y0 Q9Y6Y0 IVNS1ABP Influenza virus NS1A-binding protein 1 S(0.014)LS(0.986)FEMQQDELIEKPMSPMQYAR;S(0.198)LS(0.802)FEMQQDELIEKPMSPMQYAR 66.432 0.013994 667600000.0 259415.0 244093.0 260857.0 198508.0 211987.0 242493.0 183373.0 207872.0 405556.0 205452.0 True False 245024.73281901827 232366.40588893738 277672.25960595737 217374.14063639374 228669.1708589627 240979.51123878857 201910.1323880178 207150.94054968932 331917.2536347897 203631.85511923707 1.2032730963215137 1.1411102931458084 1.3635993221363416 1.0674859319486623 1.1229538262815755 1.1834077290985858 0.991544924392055 1.0172816057114034 1.6299868870734142 1.0 17.635603741291025 -5.295037294395523 24.996225364915727 1.1397154615974974 1.2265060361245668 0.04907235346460226 0.18189692339376876 2227.9782525635196 1657570.023425611 0.05041996994331011 0.07478923456148354 5.069471730676791e-06 5.295037294395523 0.0867905745270694 SLS(ph)FSEPQQPAPAMK ddPTM_KYSE-520_SHP099_60min_R1 2 SLSFSEPQQPAPAMK 15 0 Q9H8N7 Q9H8N7 ZNF395 Zinc finger protein 395 1 SLS(0.999)FS(0.001)EPQQPAPAMK;S(0.003)LS(0.995)FS(0.003)EPQQPAPAMK 236.43 1.1695e-18 634610000.0 613780.0 705600.0 588640.0 534120.0 554880.0 728990.0 526700.0 740570.0 859400.0 708360.0 True False 579732.3998599038 671701.9168728081 626584.6762573003 584882.6042109667 598545.8991646711 724440.1030048893 579943.9760966391 738001.1355203368 703354.6237110012 702084.4814957416 0.825730257738819 0.9567252012774793 0.8924633612786964 0.8330658483789807 0.8525268894841702 1.031841782717545 0.8260316121232436 1.0511571683625272 1.001809101680404 1.0 19.42128511422835 -7.148657390238037 1.1652871701591205 1.022951654078838 0.8851754882732701 0.3714743986138601 0.0683040778357485 0.5407218938654681 1.3227834866790986 0.05523205605622355 0.022990568640558193 7.10137766301259e-08 7.148657390238037 -0.13777616580556784 SLS(ph)GSSPCPK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SLS(0.991)GS(0.009)SPCPK 136.5 0.00027635 2587100000.0 687260.0 756850.0 642360.0 612480.0 678110.0 713540.0 722960.0 681570.0 850280.0 667220.0 True False 649136.3177811555 720489.7899449894 683767.5534123393 670689.9150511737 731473.3990818823 709086.5321857767 796043.8522096574 679205.7927496341 695890.5858145091 661308.9498893043 0.9815931235919513 1.089490456866781 1.0339608340803406 1.0141854501794352 1.1060993491836497 1.072246991825031 1.2037397230793658 1.027062756164612 1.0522927081676323 1.0 19.33496490099771 -5.760362782091265 24.99988695297248 1.0843687035909366 1.034367204680406 0.13106708002048917 0.05703566064869604 57.076830657920986 1325355.7300121747 0.017146029664269015 0.02092687633552425 1.7363497861910557e-06 5.760362782091265 -0.05000149891053063 SLS(ph)IEIGHEVK ddPTM_KYSE-520_SHP099_60min_R1 3 SLSIEIGHEVK 11 0 A0A3B3IU16;C9JTT8;Q68DU7;H7C1N3;O15155-2;O15155 A0A3B3IU16 BET1;DKFZp781C0425 BET1 homolog 1 S(0.118)LS(0.882)IEIGHEVK;S(0.126)LS(0.874)IEIGHEVK;S(0.056)LS(0.944)IEIGHEVK 171.95 7.3697e-06 1472400000.0 1426580.0 1928970.0 1925760.0 2786610.0 2470120.0 2796430.0 2768470.0 3517660.0 3954710.0 2137900.0 True False 1347444.763583274 1836299.385756999 2049897.5709249412 3051448.5765751568 2664504.3909397298 2778976.443086962 3048333.965263456 3505458.0584880156 3236634.3541262853 2118959.8692610296 0.635899142371764 0.866604135545707 0.9674074533746723 1.4400690739080986 1.2574586378877266 1.3114813939615138 1.4385991964663958 1.654329612061278 1.5274637340135355 1.0 21.01492483425637 -4.851382920233553 1.0060618688818632 1.4248836354157528 0.5494128470252808 0.6841365158927422 0.17471561550678877 0.478561841167223 0.7117904345137042 0.062133418280288434 0.37181200494061156 1.408046767072409e-05 4.851382920233553 -0.875470788390472 SLS(ph)KSDSDLLTCSPTEDATMGSR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSKSDSDLLTCSPTEDATMGSR 23 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.106)LS(0.445)KS(0.445)DS(0.004)DLLTCSPTEDATMGSR 71.905 0.0051639 455260000.0 859860.0 812050.0 783140.0 784280.0 740920.0 774530.0 710580.0 751850.0 995880.0 737050.0 True False 812161.8517115868 773037.8990881009 833622.457468304 858817.7353976198 799226.1887418688 769695.8709726837 782412.3609925004 749242.0078331085 815053.2960918203 730520.3104162225 1.1117580717897468 1.0582017885959303 1.1411352231854277 1.1756247200140106 1.094050606596414 1.053626928639589 1.0710343707578942 1.0256278944608934 1.1157161333781864 1.0 19.4785648587995 -6.0970429596704445 4.298007784487758 1.0563343072243636 1.12015775673427 0.40226326730541295 0.03923369431356158 0.25986039148064927 8.286600709053397 0.01339528913409034 0.013588612926930753 7.997551406778203e-07 6.0970429596704445 0.06382344950990637 SLS(ph)LGDK ddPTM_KYSE-520_SHP099_60min_R1 9 SLSLGDK 7 0 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 S(0.003)LS(0.997)LGDK;SLS(1)LGDK;SLS(1)LGDK;SLS(1)LGDK;SLS(1)LGDK;S(0.001)LS(0.999)LGDK;SLS(1)LGDK;SLS(1)LGDK;S(0.001)LS(0.999)LGDK 144.79 0.0015199000000000002 12179380000.0 37458990.0 28969330.0 26000830.0 28899180.0 29121090.0 29821940.0 29233040.0 31268970.0 30102950.0 29288750.0 True False 35381065.15205475 27577599.902949188 27676885.10459894 31645749.37834467 31412754.106663216 29635810.210573044 32188200.970176723 31160505.241302464 24637013.11361539 29029274.461302694 1.218806387986695 0.94999273714923 0.9534129122480636 1.0901322876853106 1.0821060701512815 1.0208939341587364 1.1088186517746084 1.0734166051184226 0.8486954486739797 1.0 24.791005178850547 -7.744819394506615 24.99712598386232 0.9243477077784102 1.056603196532247 0.3141564335507093 0.08113528648849862 253.01897776687636 380554.0718855387 0.05408095270274966 0.02031822254650735 1.7996191482874633e-08 7.744819394506615 0.13225548875383686 SLS(ph)LGDKEISR ddPTM_KYSE-520_SHP099_60min_R1 7 SLSLGDKEISR 11 1 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 S(0.002)LS(0.998)LGDKEISR;SLS(1)LGDKEISR;SLS(1)LGDKEISR;SLS(1)LGDKEISR;S(0.001)LS(0.704)LGDKEIS(0.296)R;S(0.003)LS(0.634)LGDKEIS(0.363)R;S(0.002)LS(0.998)LGDKEISR 191.06 5.0948e-07 12611250000.0 8901030.0 7752310.0 7743670.0 6392780.0 7072020.0 6610470.0 6249890.0 6366440.0 8293770.0 6477260.0 True False 8407272.122136606 7379877.39114545 8242839.358510078 7000347.889140602 7628547.739710456 6569211.604700663 6881689.874248384 6344356.305578273 6787830.436927605 6419876.515632022 1.3095691329366526 1.1495357228719092 1.283956060282351 1.0904178409187726 1.188270167056234 1.0232613647170656 1.0719349285756312 0.9882365011429952 1.0573147973173063 1.0 22.614114117139255 -5.670263183737241 0.5547099587149165 1.0031729297008365 1.2882983724158248 0.7181763060946276 0.057286173258983275 0.5993044299814971 0.36171234488513726 0.03972764119302487 0.09177069620004233 2.136666870661672e-06 5.670263183737241 0.2851254427149883 SLS(ph)LPILRPAGTGPPALER ddPTM_KYSE-520_SHP099_60min_R1 2 SLSLPILRPAGTGPPALER 19 1 A0A5F9ZHW8;O94827-5;O94827-3;O94827;O94827-7;O94827-2;O94827-6;Q5SY18;O94827-4 A0A5F9ZHW8 PLEKHG5 Pleckstrin homology domain-containing family G member 5 1 S(0.01)LS(0.99)LPILRPAGTGPPALER;S(0.015)LS(0.985)LPILRPAGTGPPALER 107.56 0.00010139 2045120000.0 116049.0 105070.0 95060.0 60133.0 88261.0 81756.0 73005.0 107968.0 108627.0 77612.0 True False 109611.53063205381 100022.2794867148 101187.7197013778 65848.02224035434 95206.63856360476 81245.73047815166 80385.05786013888 107593.48420792057 88903.07506382916 76924.41806122228 1.4249250549392085 1.3002669634381827 1.3154174220836476 0.8560093647760519 1.2376647228950384 1.0561760820015582 1.0449875330374596 1.3986909088124595 1.1557198260905055 1.0 16.231154004057384 -5.030685001059317 24.861916314177858 1.121411184691258 1.3489076784906222 0.38185175003666016 0.13964081389376873 673.6188059062094 545786.1569817318 0.038077357410260304 0.06605975007073488 9.317834640342026e-06 5.030685001059317 0.2274964937993642 SLS(ph)MDSQVPVYSPSIDLK ddPTM_KYSE-520_SHP099_60min_R1 7 SLSMDSQVPVYSPSIDLK 18 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 S(0.043)LS(0.957)MDSQVPVYSPSIDLK;S(0.171)LS(0.828)MDS(0.001)QVPVYSPSIDLK;S(0.035)LS(0.962)MDS(0.003)QVPVYSPSIDLK;S(0.003)LS(0.869)MDS(0.128)QVPVYSPSIDLK;S(0.206)LS(0.794)MDSQVPVYSPSIDLK;S(0.173)LS(0.827)MDSQVPVYSPSIDLK;S(0.136)LS(0.862)MDS(0.002)QVPVYSPSIDLK 338.14 4.229399999999999e-59 2310202000.0 5487080.0 6171530.0 4248440.0 3909630.0 4158680.0 5997020.0 4566670.0 6046080.0 6699820.0 6014790.0 True False 5182700.734177204 5875040.435144604 4522301.240144337 4281200.059726878 4485944.45634756 5959590.373698378 5028313.57000425 6025107.559645684 5483301.576717989 5961503.640035815 0.8693613301469137 0.9854964099475596 0.7585839937719417 0.7181409788925598 0.7524854008678605 0.9996790631268615 0.8434639771475576 1.0106691068982536 0.9197849918087188 1.0 22.507244829613104 -6.265097523677708 24.995883336618462 0.9484327820913292 0.8174680954533101 0.4052647421668031 0.08335482022995724 385.1408115565606 2631634.5294035436 0.03116823766680282 0.028567793003906952 5.431283547590914e-07 6.265097523677708 -0.13096468663801908 SLS(ph)MVDLQDAR ddPTM_KYSE-520_SHP099_60min_R1 6 SLSMVDLQDAR 11 0 A0A3B3ITG3;Q5VWQ8-2;Q5VWQ8;H0Y3A3;Q5VWQ8-3;Q5VWQ8-4;Q5VWQ8-5 A0A3B3ITG3 DAB2IP Disabled homolog 2-interacting protein 1 S(0.034)LS(0.966)MVDLQDAR;S(0.004)LS(0.996)MVDLQDAR;S(0.001)LS(0.999)MVDLQDAR;SLS(1)MVDLQDAR;SLS(1)MVDLQDAR;SLS(1)MVDLQDAR 301.07 6.6928e-29 2454650000.0 3181060.0 3041140.0 2578690.0 2294750.0 2546050.0 2859310.0 2554290.0 3092630.0 3498920.0 3061430.0 True False 3004600.260514107 2895039.069555793 2744916.483449883 2512842.350058252 2746409.6499571293 2841463.9856828097 2812502.560668091 3081902.388355269 2863604.328595406 3034308.1119565004 0.9902093491015854 0.9541018784968057 0.9046268151324883 0.8281434374302842 0.9051189096898481 0.9364454369304815 0.9269007816264938 1.0156853802061914 0.943742106252016 1.0 21.532936157553305 -7.1345036760935825 5.60234104905648 0.9844195181592631 0.917049304007838 0.33130057678230196 0.04266671154967695 0.2932936937231754 12.087327278637382 0.022343786657629507 0.012734562408087272 7.336625042923951e-08 7.1345036760935825 -0.06737021415142508 SLS(ph)PDEER ddPTM_KYSE-520_SHP099_60min_R1 1 SLSPDEER 8 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 S(0.037)LS(0.963)PDEER 96.171 0.005587 445870000.0 894950.0 979860.0 940280.0 931140.0 1029900.0 945570.0 1045300.0 844650.0 1098800.0 1028300.0 True False 845305.3394614047 932786.0548001548 1000891.9533011935 1019635.2656425498 1110947.2706705867 939668.3468886167 1150969.125144896 841720.106292792 899285.618493887 1019190.0620052936 0.8293893072291498 0.9152228711540458 0.9820464215790156 1.0004368210148953 1.0900295362817387 0.9219755783722862 1.129297829769182 0.825871579474271 0.882353205764693 1.0 19.95899168456087 -4.431087194862306 2.293437302946667 0.9810130373472861 0.8177855274796627 0.2318090881611241 0.08487034195949951 0.6425730708770383 5.1442097716670165 0.023180375999456812 0.18134480883840584 3.706063063538479e-05 4.431087194862306 -0.16322750986762335 SLS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSPFR 6 0 Q12802-2;Q12802;Q12802-4;A8MYJ1;H0YMW2;A0A087WTD7;A0A087WY36;H0YLH1 Q12802-2 AKAP13 A-kinase anchor protein 13 1 S(0.043)LS(0.957)PFR;S(0.006)LS(0.994)PFR 89.296 0.015694999999999997 6472500000.0 941530.0 915270.0 866030.0 1160830.0 861530.0 798100.0 794890.0 933690.0 974890.0 776680.0 True False 889301.4540064773 871299.0553517223 921855.6794969931 1271154.9341837356 929327.5095648413 793118.7618598365 875245.2385788076 930451.2473148834 797874.5509769805 769799.2194478967 1.1552381861913137 1.1318523497290913 1.1975274282015405 1.6512811419780515 1.2072336345461079 1.0302930190402957 1.1369785997010198 1.2086934148649917 1.0364709794707503 1.0 19.554122682739084 -6.004907865790808 24.991923751233653 1.101139241435595 1.2872244604352476 0.29459356614075616 0.1464330466992721 321.0016934181771 1634621.6436026557 0.04905840446464031 0.054148315554178934 9.887628353357183e-07 6.004907865790808 0.1860852189996527 SLS(ph)PGGAALGYR ddPTM_KYSE-520_SHP099_60min_R1 12 SLSPGGAALGYR 12 0 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 SLS(1)PGGAALGYR;SLS(1)PGGAALGYR;SLS(1)PGGAALGYR;S(0.001)LS(0.999)PGGAALGYR;SLS(1)PGGAALGYR;SLS(1)PGGAALGYR;S(0.004)LS(0.996)PGGAALGYR;SLS(1)PGGAALGYR;S(0.005)LS(0.995)PGGAALGYR;SLS(1)PGGAALGYR;SLS(1)PGGAALGYR;SLS(1)PGGAALGYR 285.5 1.5367999999999998e-29 102139450000.0 29095820.0 27689790.0 24765340.0 20259870.0 21869100.0 24931200.0 22128840.0 25635680.0 30458240.0 24789830.0 True False 27481816.863520812 26359530.92517786 26361753.44234501 22185361.953447968 23590073.751841996 24775595.133040942 24365839.103866264 25546755.80949267 24927791.405747462 24570211.392395914 1.1185014416288659 1.0728247512488116 1.0729152070097185 0.9029373658671077 0.9601087013497468 1.008359054684755 0.9916821111033298 1.039745055567531 1.0145533958841808 1.0 24.550406934343414 -5.040122540829988 17.175880050782748 0.9895336278796633 1.0899660946057805 0.6184851211288819 0.03617812125999486 9.34934839888076 4002.4271868328883 0.010637182320339921 0.018452070620631478 9.117535420509357e-06 5.040122540829988 0.10043246672611728 SLS(ph)PGVSR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSPGVSR 8 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 S(0.015)LS(0.985)PGVSR;S(0.004)LS(0.996)PGVSR 123.86 0.00089702 1914670000.0 2763340.0 2730530.0 2449420.0 2203460.0 2696170.0 2636210.0 2485640.0 2703190.0 3102420.0 2719810.0 True False 2610052.021618278 2599351.2401909144 2607313.5324105686 2412876.175905597 2908343.239891165 2619756.4355375525 2736912.748708659 2693813.264819292 2539098.733643802 2695714.5993801584 0.9682226828531563 0.9642531300563489 0.9672068152207521 0.8950784984658257 1.078876540031314 0.971822624004755 1.015282830511054 0.9992946825449164 0.9419019113624387 1.0 21.362236332960293 -5.744368744770464 24.99999409027604 1.0003968257574083 0.9511245562688158 0.312664400360235 0.03805876390744757 323.98784802399365 474478.8485834545 0.011009641386690349 0.014175940731733692 1.801487509142863e-06 5.744368744770464 -0.049272269488592535 SLS(ph)PIIGK ddPTM_KYSE-520_SHP099_60min_R1 8 SLSPIIGK 8 0 A0A0C4DH22;A0A1B0GTW6;Q9H4G0-3;Q9H4G0-2;Q9H4G0;Q9H4G0-4;H7C2K6;X6RC15 A0A0C4DH22 EPB41L1 Band 4.1-like protein 1 1 SLS(1)PIIGK;S(0.021)LS(0.979)PIIGK;S(0.001)LS(0.999)PIIGK;S(0.081)LS(0.919)PIIGK;S(0.014)LS(0.986)PIIGK;S(0.015)LS(0.985)PIIGK;SLS(1)PIIGK;S(0.001)LS(0.999)PIIGK 139.43 0.00068418 11041960000.0 13633660.0 13576380.0 11408500.0 10506940.0 11290690.0 11292820.0 10776920.0 12264440.0 16019140.0 11515120.0 True False 12877373.701772595 12924150.326238148 12143910.164245384 11505516.418573309 12179203.06776159 11222337.321521128 11866356.246203523 12221897.52018183 13110467.98565725 11413104.995427787 1.1282971379770368 1.1323956391723113 1.064032107748975 1.0080969572419198 1.0671244216749702 0.9832852081897886 1.039713228867807 1.0708652487713075 1.1487205270528436 1.0 23.444188002034995 -4.82477801247643 4.265078606848608 1.0458285644037824 1.1312826078478566 0.3674671751902524 0.043830525159397726 0.21694043141096703 7.7449819792138435 0.011931748782032724 0.02796650740143093 1.4970006452057466e-05 4.82477801247643 0.08545404344407426 SLS(ph)PILPGR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSPILPGR 9 0 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 1 S(0.229)LS(0.771)PILPGR 80.916 0.016219 712910000.0 2945000.0 2820000.0 2449700.0 2340700.0 2679300.0 2438200.0 2285300.0 2546900.0 3170800.0 2587800.0 True False 2781634.979288046 2684522.967093706 2607611.5816585855 2563159.4242428853 2890145.666868334 2422982.28939563 2516320.4263786804 2538065.3983509266 2595062.6493633203 2564874.1052779336 1.084511311320921 1.0466490193688502 1.0166626019938787 0.9993314755560438 1.126817749425231 0.9446788380020983 0.9810697613581342 0.9895477493917378 1.0117699905906747 1.0 21.290456583402644 -6.284754747113634 24.998885791626684 0.9844885365677131 1.0491422142187747 0.46910862084454374 0.03665200977943397 787.4268905091459 844281.9126595483 0.01302034807169918 0.01149126744254062 5.190930961642745e-07 6.284754747113634 0.06465367765106167 SLS(ph)PILPGRHS(ph)PAPPPDPGFPAPS(ph)PPPADSPSEGFSLK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSPILPGRHSPAPPPDPGFPAPSPPPADSPSEGFSLK 38 1 M0QZS0;A0A590UK10;A0A3B3IPE9;A0A087WZG4;Q6ZSZ5-2;Q6ZSZ5-1;Q6ZSZ5-6;Q6ZSZ5-5;Q6ZSZ5 M0QZS0 ARHGEF18 Rho guanine nucleotide exchange factor 18 3 S(0.462)LS(0.545)PILPGRHS(0.993)PAPPPDPGFPAPS(1)PPPADSPSEGFSLK 103.73 0.00053737 187440000.0 88481.0 86769.0 105190.0 91999.0 84260.0 95214.0 84538.0 105930.0 126380.0 98748.0 True False 83572.7825474995 82600.48699707574 111970.7157099509 100742.55729949208 90890.78262618063 94619.7341081601 93083.92605137211 105562.55355424796 103432.57778054028 97873.1695447814 0.853888588018611 0.8439543480737312 1.1440389253841345 1.0293174091332336 0.9286588249764813 0.9667586586624979 0.9510668397101619 1.0785647797576263 1.0568021681694408 1.0 16.578625800462852 -4.727865080342294 24.99857547813376 1.0149996262409904 0.8489210776623566 0.557487988567837 0.060652946737738495 148.62520240121893 110660.55770283064 0.016548401332318118 0.04377721285021098 1.8712633842294795e-05 4.727865080342294 -0.1660785485786338 SLS(ph)PLGGR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSPLGGR 8 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 S(0.013)LS(0.987)PLGGR;S(0.048)LS(0.952)PLGGR 91.087 0.004239199999999999 237540000.0 474170.0 413200.0 383070.0 369240.0 418990.0 413400.0 391280.0 433550.0 531470.0 413940.0 True False 447866.84486554004 393349.2517741557 407763.3051336713 404332.45858394576 451962.12927300617 410819.8172570563 430834.4009248014 432046.116241331 434968.4452684265 410272.81364044733 1.0916317873746302 0.9587504672412367 0.9938833175795673 0.9855209634686944 1.1016136440107736 1.001333268007098 1.0501168651705344 1.0530703031665296 1.0601931953737052 1.0 18.646224032943227 -5.705517131289258 24.999998072321656 1.0451762942339877 1.002999502710745 0.15307016231112702 0.042027155921847734 143.82058570488826 64293.94925488604 0.011842570590946129 0.015288676109186473 1.970075493591074e-06 5.705517131289258 -0.04217679152324272 SLS(ph)PLIK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSPLIK 7 0 Q5VY60;Q7Z4H7-3;Q7Z4H7 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 S(0.015)LS(0.985)PLIK 68.735 0.029998 446510000.0 838550.0 752410.0 639190.0 510700.0 641580.0 693890.0 612800.0 678150.0 848210.0 673180.0 True False 792033.9598920174 716263.0942095647 680393.21014016 559236.7744524461 692068.6959091506 689559.1751245732 674747.8043516617 675797.6559313999 694196.4456340558 667216.1489261149 1.187072526896714 1.0735098294044456 1.0197493139745697 0.8381643270363559 1.0372481197030916 1.0334869385796783 1.0112881791570378 1.012861659627239 1.040437115845241 1.0 19.347794681825015 -4.426018830051905 2.283667577137386 0.9970420234680982 1.2009817672657945 0.5238656766336531 0.05562092301242736 0.35323771957883315 2.779783911856174 0.01561179867179121 0.12483785317982342 3.7495674459469054e-05 4.426018830051905 0.2039397437976963 SLS(ph)PPQSQSK ddPTM_KYSE-520_SHP099_60min_R1 4 SLSPPQSQSK 10 0 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;Q9UQB8-6;I3L0Y9;I3L3C6 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 SLS(0.994)PPQS(0.005)QS(0.001)K;S(0.004)LS(0.79)PPQS(0.199)QS(0.006)K;SLS(1)PPQSQSK;SLS(1)PPQSQSK 180.47 0.00014318 2000260000.0 10032800.0 10047400.0 8788400.0 8724860.0 8217200.0 9710100.0 8464230.0 9639000.0 12036600.0 10775200.0 True False 9476260.584109053 9564707.822545132 9354914.325937182 9554068.0711752 8863846.890527563 9649495.664121293 9319876.971324196 9605564.558759505 9851056.857993755 10679740.11097875 0.8873119088700929 0.8955936870329487 0.8759496231860876 0.8945974313882076 0.8299684073225291 0.903532816702312 0.8726688921712039 0.8994193172252389 0.9224060469286972 1.0 23.348373204011896 -8.17484703058551 1.2307457008468314 0.9998743100908457 0.8794623331111429 0.7811360594841907 0.019243561136690988 0.30812200548747387 0.9435896417338625 0.017855364607620675 0.005488629854813695 6.685793665305438e-09 8.17484703058551 -0.12041197697970285 SLS(ph)PSHLTEDR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSPSHLTEDR 11 0 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 S(0.001)LS(0.999)PSHLTEDR;SLS(0.988)PS(0.012)HLTEDR 232.98 4.51e-14 810370000.0 384100.0 483020.0 518560.0 778360.0 362180.0 365290.0 355090.0 312710.0 481890.0 366200.0 True False 362793.20731563296 459814.99417219934 551987.2073253358 852335.1003775336 390681.50547768985 363010.0896125545 390985.96254443814 311625.28199706244 394390.9234583364 362955.7528992885 0.9995521614346732 1.2668623943805817 1.520811291503345 2.348316822557807 1.0763887949341708 1.0001497061634428 1.0772276218829555 0.8585765055597038 1.0866088229982414 1.0 18.469434157744324 -5.967684897879821 24.999416245524934 1.0044452724478512 1.5386880956870639 0.3803077163408978 0.32461347045823613 215.58508335030015 166778.7514145685 0.10655837552491063 0.12082502145497606 1.0772465257738376e-06 5.967684897879821 0.5342428232392127 SLS(ph)PVAAPPLREPR ddPTM_KYSE-520_SHP099_60min_R1 7 SLSPVAAPPLREPR 14 1 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 S(0.066)LS(0.934)PVAAPPLREPR;S(0.228)LS(0.772)PVAAPPLREPR;S(0.201)LS(0.799)PVAAPPLREPR;S(0.039)LS(0.961)PVAAPPLREPR;S(0.014)LS(0.986)PVAAPPLREPR;S(0.174)LS(0.826)PVAAPPLREPR;S(0.052)LS(0.948)PVAAPPLREPR 133.48 1.8645e-05 11754480000.0 10003810.0 9271270.0 8523990.0 7137790.0 8239830.0 8852010.0 7642490.0 7693460.0 10247220.0 8326270.0 True False 9448878.717199178 8825864.272740008 9073460.03426621 7816163.415545178 8888257.74278048 8796761.322103614 8415067.472714655 7666773.182927059 8386583.159394734 8252505.72554003 1.144970876900647 1.0694769038966596 1.0994793988673612 0.9471260821250386 1.0770374524276805 1.0659503446182668 1.0196984712984234 0.9290236732826209 1.0162468755931617 1.0 22.976400803705683 -1.0000000000006644 0.3242228157951065 0.9899694267316496 2.480909737804323 0.4681365634798301 0.046636008030289264 52.96334816584978 0.7559632143339176 0.04463240686703816 47.031760031433784 0.09999999999984703 1.0000000000006644 1.4909403110726736 SLS(ph)QGSTNSNMLDVQGGAHK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSQGSTNSNMLDVQGGAHK 20 0 E9PCH4;Q8TEU7;A0A5F9ZHG7;B7Z7Y1;Q8TEU7-2 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 S(0.012)LS(0.988)QGSTNSNMLDVQGGAHK 178.2 1.3733e-09 697770000.0 178720.0 212390.0 201910.0 226050.0 203450.0 243690.0 208430.0 199380.0 230280.0 242350.0 True False 168806.04533051283 202186.46559611068 214925.4416674226 247533.724035589 219460.3575278481 242169.04031778447 229500.13848077203 198688.39731564204 188466.95688639674 240202.96754544717 0.7027641958610449 0.8417317556988814 0.8947659717266316 1.0305190088409495 0.9136454881071587 1.008185047805312 0.9554425610389259 0.8271687870719148 0.7846154392357296 1.0 17.87389444911339 -4.377863699469632 1.9320114117109453 0.928530629037773 0.6659764004513803 0.46992011372548126 0.07380892768350127 0.5757407190722527 2.757933326615313 0.021555019744007368 0.24830314237576165 4.189250214125109e-05 4.377863699469632 -0.26255422858639266 SLS(ph)QIHEAAVR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSQIHEAAVR 11 0 Q9NZM1-2;Q9NZM1-6;Q9NZM1;Q9NZM1-5;Q9NZM1-3;H0YD14 Q9NZM1-2 MYOF Myoferlin 1 S(0.176)LS(0.824)QIHEAAVR;S(0.259)LS(0.741)QIHEAAVR 99.796 0.0014810000000000001 216900000.0 556910.0 774440.0 561830.0 616680.0 632740.0 681680.0 600080.0 670040.0 841020.0 608650.0 True False 526017.0921274392 737234.7399418605 598046.4607597842 675289.0817883972 682533.0382018697 677425.3822636427 660741.9426164252 667715.7876285115 688311.968388906 603257.8345225353 0.8719606477117195 1.2220889605608933 0.9913612829133404 1.1194037493485234 1.1314118095823469 1.1229450220067334 1.0952894513825706 1.1068497571307852 1.1409913456551941 1.0 19.20241522131118 -4.242010485897452 24.72388759777142 1.1049464102211952 0.8719604016638051 0.5446979779143533 0.06345645157868993 2793.463967971349 3554711.947892182 0.0144802541153634 0.5203564296624944 5.7278220118097865e-05 4.242010485897452 -0.23298600855739016 SLS(ph)S(ph)PTVTLSAPLEGAK ddPTM_KYSE-520_SHP099_60min_R1 3 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 2 S(0.098)LS(0.916)S(0.983)PT(0.002)VTLSAPLEGAK;S(0.075)LS(0.925)S(0.967)PT(0.034)VTLSAPLEGAK;S(0.374)LS(0.627)S(0.931)PT(0.068)VTLSAPLEGAK 227.67 1.4531999999999999e-18 464668000.0 976680.0 965950.0 891020.0 969840.0 954080.0 936750.0 919480.0 1009650.0 1245700.0 962560.0 True False 922501.6134366903 919544.3120794902 948456.5748824074 1062013.3020069704 1029160.6680273736 930903.3957802317 1012430.0116600296 1006147.7598040813 1019512.281541533 954032.4672603491 0.9669499153270911 0.9638501242207228 0.9941554479860065 1.1131836058543216 1.0787480545423855 0.9757565153452942 1.0612112757203935 1.0546263301639924 1.0686347860563061 1.0 19.863678838737265 -5.0352786039430635 9.856088579905418 1.0513473606693096 0.968728307207839 0.48210619802100085 0.03655011261348355 0.43982755222141684 121.45224581855697 0.010118615360447872 0.01783508337145532 9.219797788113526e-06 5.0352786039430635 -0.08261905346147058 SLS(ph)SPTVTLSAPLEGAK ddPTM_KYSE-520_SHP099_60min_R1 11 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 SLS(0.998)S(0.002)PTVTLSAPLEGAK;S(0.01)LS(0.986)S(0.004)PTVTLSAPLEGAK;S(0.013)LS(0.926)S(0.06)PTVTLSAPLEGAK;S(0.007)LS(0.497)S(0.497)PTVTLSAPLEGAK;S(0.001)LS(0.989)S(0.01)PTVTLSAPLEGAK;SLS(0.992)S(0.008)PTVTLSAPLEGAK;S(0.03)LS(0.952)S(0.018)PTVTLSAPLEGAK;SLS(0.9)S(0.1)PTVTLSAPLEGAK;S(0.008)LS(0.475)S(0.475)PT(0.042)VTLSAPLEGAK;S(0.111)LS(0.87)S(0.02)PTVTLSAPLEGAK;SLS(0.903)S(0.097)PTVTLSAPLEGAK 396.22 1.3120999999999998e-86 30663170000.0 14989990.0 20496520.0 14249600.0 12450310.0 12568370.0 19398590.0 13862540.0 18143080.0 20262460.0 19781750.0 True False 14158465.372895762 19511836.413296252 15168152.016166119 13633583.71907779 13557429.214756824 19277516.204268403 15263900.828552699 18080145.8901067 16583308.03904956 19606499.084968608 0.7221312337066029 0.9951718727926839 0.7736287824986989 0.6953604343128257 0.6914762883471979 0.9832207229207778 0.7785123066797184 0.9221506507486544 0.8458066872205253 1.0 24.22482861668928 -6.261946410196096 24.999999186903516 0.8931083760095059 0.7831926091704577 0.2913928633667432 0.10031987319463961 76.26619702090902 3760362.4324338892 0.03518866742631254 0.03294968643698693 5.470834661391456e-07 6.261946410196096 -0.10991576683904813 SLS(ph)SPTVTLSAPLEGAKDS(ph)PVRR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSPTVTLSAPLEGAKDSPVRR 23 2 A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 2 S(0.298)LS(0.349)S(0.349)PT(0.004)VTLS(0.016)APLEGAKDS(0.984)PVRR 129.03 3.2476e-05 231490000.0 291410.0 343550.0 330180.0 287420.0 244360.0 228600.0 229470.0 265830.0 345120.0 265860.0 True False 275244.90638856683 327045.34232093685 351463.93110667873 314736.31038402626 263589.7417817891 227173.22260513555 252667.06701138377 264907.8977751885 282454.9077672099 263504.6872359503 1.044554118849901 1.2411367165855773 1.3338052343333344 1.1944239538411001 1.0003227819084775 0.8621221314432163 0.9588712430953374 1.0053251824624345 1.0719160661999572 1.0 18.00746909926673 -5.764160476477098 4.716504210302524 0.9741442462628433 1.2180535289354544 0.6305120730652176 0.0825650951244812 0.12202983031072115 6.948284721066788 0.026835875595874855 0.032709608236933176 1.7212324435838246e-06 5.764160476477098 0.24390928267261103 SLS(ph)SSLDDTEVKK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSSLDDTEVKK 13 1 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 S(0.059)LS(0.346)S(0.298)S(0.298)LDDTEVKK 62.378 0.021879 894690000.0 481360.0 500430.0 414660.0 643620.0 482320.0 601920.0 470630.0 587590.0 798160.0 436010.0 True False 454658.00123262964 476388.5916392556 441389.64707945846 704789.4512885906 520275.839974596 598163.1940091135 518205.8733061729 585551.787434537 653234.2639762295 432147.2906106466 1.0520903662040186 1.1023755140662659 1.0213870517520818 1.630901006674568 1.2039317410492594 1.3841650914063994 1.1991417846769814 1.354981970631175 1.5116009707087958 1.0 18.721163590567617 -5.1985792083713624 24.99985036314262 1.3331842491337533 1.062993029091239 0.3552148459566815 0.16511464774416929 231.74307861294702 92164.82426328772 0.04200022556208812 0.07274651208693286 6.3302489755922804e-06 5.1985792083713624 -0.2701912200425143 SLS(ph)SSPDKR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSSPDKR 9 1 Q9BVI0;Q5JWZ0;Q5JXL1;B0QYY0;Q9BVI0-2 Q9BVI0 PHF20 PHD finger protein 20 1 SLS(0.333)S(0.333)S(0.333)PDKR 152.04 0.00026225 1831400000.0 2468100.0 2160200.0 2171000.0 2070300.0 2031900.0 2014000.0 2280600.0 2257200.0 2533900.0 2018700.0 True False 2331189.5729646315 2056420.7494736938 2310946.1337228147 2267060.6895416086 2191798.970070454 2001429.8789446314 2511145.304511096 2249370.300034439 2073807.6344208803 2000815.888524834 1.1651194826743285 1.0277910932573893 1.1550018904671104 1.1330681161338998 1.095452601431723 1.0003068700240332 1.2550606574613512 1.1242265282553607 1.0364809907371646 1.0 20.932156988475572 -7.880908243484605 4.01008714745669 1.002430278991003 1.1177358620951732 0.2722981428830731 0.06727380224394672 0.28131729720013315 7.6600063881211895 0.06384695754737052 0.01690588923141272 1.315502738548416e-08 7.880908243484605 0.11530558310417027 SLS(ph)TKR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSTKR 6 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(0.095)LS(0.9)T(0.005)KR;S(0.049)LS(0.951)TKR 130.22 0.005123300000000001 455800000.0 1339580.0 1038610.0 818930.0 1056570.0 1406970.0 1462700.0 1443890.0 1045180.0 1400120.0 2071130.0 True False 1265270.8270134742 988713.6166146081 871719.5381343279 1156986.0951306452 1517690.534435766 1453570.7467389842 1589852.4922084224 1041554.514526847 1145893.50215295 2052781.3995147583 0.6163690041777279 0.4816458376173531 0.4246528823480119 0.5636187542444298 0.7393337326587827 0.7080981672391337 0.774486992421227 0.5073869603324798 0.5582150648986879 1.0 20.969148572500128 -5.604369487401974 4.924383328646532 0.6918267479269806 0.5031484375960176 0.3342402666398301 0.13263512810262695 0.2621266509831469 11.281187876513341 0.03955562940297337 0.05176366068471948 2.48674075823814e-06 5.604369487401974 -0.18867831033096305 SLS(ph)TNGENMGLAVQYLDPR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSTNGENMGLAVQYLDPR 19 0 J3KRN4;J3QRB6;Q99759;Q99759-2 J3KRN4 MAP3K3 Mitogen-activated protein kinase kinase kinase 3 1 S(0.173)LS(0.779)T(0.048)NGENMGLAVQYLDPR 88.945 0.0011423 178870000.0 63544.0 73024.0 57972.0 45548.0 63152.0 68719.0 52172.0 52337.0 74772.0 63715.0 True False 60019.08764817646 69515.81742874131 61708.967878479554 49876.86822549447 68121.7031142721 68290.09923098118 57446.054909652295 52155.45516254765 61195.28964873038 63150.53466951994 0.9504129769014465 1.100795389817873 0.9771725322899575 0.7898091201683507 1.0787193405529711 1.081385923149466 0.9096685437467729 0.8258909514462252 0.969038345739719 1.0 15.946507328317614 SLS(ph)TSGESLYHVLGLDK ddPTM_KYSE-520_SHP099_60min_R1 4 SLSTSGESLYHVLGLDK 17 0 Q9H3Z4-2;Q9H3Z4 Q9H3Z4-2 DNAJC5 DnaJ homolog subfamily C member 5 1 SLS(0.498)T(0.498)S(0.003)GESLYHVLGLDK;S(0.119)LS(0.814)T(0.025)S(0.036)GES(0.005)LYHVLGLDK;SLS(0.33)T(0.33)S(0.33)GES(0.011)LYHVLGLDK;S(0.012)LS(0.619)T(0.104)S(0.026)GES(0.238)LYHVLGLDK 277.34 3.6393e-30 5190870000.0 656990.0 1135360.0 1251140.0 2911030.0 805758.0 1020150.0 1224640.0 1028010.0 1199010.0 1047500.0 True False 620545.4550229046 1080815.6013898957 1331790.486294778 3187693.415966918 869166.5704641127 1013782.865444572 1348438.5625346277 1024444.0732493383 981300.0085824151 1038219.9649426679 0.5977013311020002 1.0410275643751274 1.282763317278648 3.0703449399982863 0.8371699637967465 0.976462502819 1.2987985283148458 0.9867312398542728 0.9451754365334363 1.0 19.985680705421064 SLS(ph)VEHLETK ddPTM_KYSE-520_SHP099_60min_R1 5 SLSVEHLETK 10 0 J3KN34;P26045-2;P26045 J3KN34 PTPN3 Tyrosine-protein phosphatase non-receptor type;Tyrosine-protein phosphatase non-receptor type 3 1 S(0.107)LS(0.893)VEHLETK;S(0.008)LS(0.991)VEHLET(0.001)K;S(0.067)LS(0.933)VEHLETK;S(0.002)LS(0.998)VEHLET(0.001)K;S(0.001)LS(0.882)VEHLET(0.117)K 183.08 4.8366e-06 4212470000.0 5527490.0 5538040.0 5049760.0 6120130.0 5541160.0 4902380.0 4767190.0 5073840.0 6125740.0 4537070.0 True False 5220869.110921865 5271984.245632492 5375275.609501671 6701785.315115822 5977217.767112357 4871782.427974471 5249104.088490868 5056240.033283162 5013460.033338874 4496875.089587045 1.1609993622040558 1.172366174421942 1.1953357614821565 1.4903205407315987 1.329193639590566 1.0833706364794433 1.1672781618163428 1.1243897000811478 1.114876427176737 1.0 22.100491379918576 -6.2679781059738975 24.930150180880304 1.1100882843830018 1.2723704958499393 0.43314544613625705 0.09767356109560162 588.7909511959367 2244872.924974213 0.03733213571533008 0.03370188779561088 5.395378214731825e-07 6.2679781059738975 0.16228221146693755 SLS(ph)VPDSGR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSVPDSGR 9 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 SLS(1)VPDSGR 136.27 0.00094533 0.0 592480.0 471780.0 444740.0 391460.0 452740.0 558520.0 498190.0 518580.0 692750.0 510320.0 True False 559613.9533204014 449114.98064378294 473408.65200916014 428664.24070325965 488368.0622617735 555034.0695075251 548551.9070658523 516781.16701748146 566964.062806371 505798.96182295255 1.1063960101924566 0.8879317961134705 0.9359620871955642 0.8474992498171778 0.9655378898004134 1.0973412588810463 1.0845255693859348 1.02171258943464 1.1209276918303135 1.0 18.94820455023904 -6.15030309223804 5.0689652578978635 1.0670440528700345 0.9364096240246077 0.4019521260165757 0.07074183992473311 0.2168948822186365 8.309783743648067 0.02317860540123731 0.023218736589901152 7.074518844526068e-07 6.15030309223804 -0.13063442884542675 SLS(ph)VPVDLSR ddPTM_KYSE-520_SHP099_60min_R1 9 SLSVPVDLSR 10 0 Q9NYF3;D6RHW3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.258)LS(0.742)VPVDLSR;S(0.001)LS(0.999)VPVDLSR;S(0.001)LS(0.999)VPVDLSR;SLS(1)VPVDLSR;SLS(1)VPVDLSR;SLS(1)VPVDLSR;SLS(1)VPVDLSR;SLS(1)VPVDLSR;SLS(1)VPVDLSR 261.83 9.7059e-20 7801620000.0 8615490.0 9170970.0 8293470.0 7021800.0 7081880.0 8081520.0 7200240.0 7561600.0 8935030.0 8418320.0 True False 8137571.595146483 8730382.835293382 8828080.346221171 7689149.7608188465 7639183.665614733 8031080.235992371 7928110.526770589 7535370.5744907055 7312653.785776699 8343740.234153859 0.9752906210857984 1.046339242388786 1.058048321073652 0.9215471173640397 0.9155586644877642 0.9625275968106413 0.9501866434333668 0.9031166315132615 0.8764239514364839 1.0 22.992262812424936 -5.269055977328652 24.773042916439408 0.9299779693849433 1.0285373804644595 0.563444244575364 0.03776577134838247 346.42573543624445 1126752.3661353583 0.010652905093444473 0.016151235166706714 5.382004080157287e-06 5.269055977328652 0.09855941107951627 SLS(ph)Y(ph)SPVER ddPTM_KYSE-520_SHP099_60min_R1 1 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.035)LS(0.958)Y(0.722)S(0.284)PVER 96.015 0.010622 982400000.0 1150400.0 1073400.0 1039000.0 978980.0 1138400.0 1038600.0 1015600.0 1010400.0 1238400.0 1096600.0 True False 1086585.018734455 1021832.2527937513 1105975.6024587792 1072021.9648589313 1227985.6033900331 1032117.7121508914 1118266.7593008298 1006895.1582291338 1013537.7775235084 1086884.9771418902 0.9997240200998786 0.9401475540501041 1.0175645314070771 0.9863251286055649 1.1298211211081286 0.9496107995392331 1.028873140046026 0.9264045224701695 0.932516134493589 1.0 20.051767840243787 -7.262178427859327 24.996778294128607 0.9470952455068679 1.0069103086587083 0.182896763669689 0.052305266278414676 108.03466564014637 3653909.108740925 0.026479641468872547 0.013931262764805965 5.467912701008474e-08 7.262178427859327 0.059815063151840486 SLS(ph)YS(ph)PVER ddPTM_KYSE-520_SHP099_60min_R1 3 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.012)LS(0.972)Y(0.096)S(0.92)PVER;SLS(0.982)Y(0.152)S(0.865)PVER;S(0.002)LS(0.987)Y(0.13)S(0.882)PVER 121.68 0.00077247 2182540000.0 3743400.0 3546320.0 3255320.0 3177070.0 3339970.0 3398690.0 3107950.0 3165820.0 4003800.0 3300810.0 True False 3535746.1397171086 3375949.464065155 3465163.1358961575 3479017.77757907 3602806.6371702426 3377477.515029954 3422131.9166689795 3154838.5093279416 3276810.847584478 3271567.391391323 1.0807499026371687 1.031905829893188 1.059175227450382 1.0634100910571562 1.1012478748414383 1.032372899888084 1.0460221377905423 0.9643201963772664 1.001602735192603 1.0 21.641550558570433 -7.055088522321058 2.6094422111260864 0.9873449286372067 1.0620995764541081 0.6813378807831018 0.02204628511306028 0.1629966782137498 2.1789716078742263 0.011907738196980279 0.006374848560232296 8.808693069615131e-08 7.055088522321058 0.07475464781690144 SLS(ph)YSPVER ddPTM_KYSE-520_SHP099_60min_R1 1 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SLS(0.799)YS(0.201)PVER 114.89 0.0017737000000000002 335480000.0 783080.0 807670.0 703540.0 634590.0 735670.0 718300.0 619560.0 717370.0 856220.0 696530.0 True False 739640.9913687211 768868.3208626139 748891.3141038001 694901.2428035588 793563.0436102829 713816.823260144 682191.1711229045 714881.6109054168 700752.0315497231 690359.2860921397 1.0713855904735436 1.1137219942602408 1.0847848782378056 1.0065791201812166 1.1494928214876927 1.0339787377972252 0.9881683130309267 1.0355211051800124 1.0150541111953644 1.0 19.396987858587284 -6.508305647351573 24.676754485949502 1.0124213312110435 1.083322542191496 0.5055411674222725 0.03552441985635896 497.60195214084024 842597.3445814677 0.01249669465830664 0.010632647883344098 3.1023754328474393e-07 6.508305647351573 0.07090121098045254 SLSFPILNPALSQPSQPS(ph)SPLPGSHGR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSFPILNPALSQPSQPSSPLPGSHGR 27 0 Q8ND24;E9PN76;Q8ND24-2 Q8ND24 RNF214 RING finger protein 214 1 SLSFPILNPALSQPS(0.001)QPS(0.871)S(0.127)PLPGS(0.002)HGR;SLSFPILNPALSQPS(0.015)QPS(0.726)S(0.219)PLPGS(0.04)HGR 181.81 4.0005e-17 106161000.0 102223.0 98011.0 87367.0 86792.0 80470.0 96805.0 82674.0 89274.0 124772.0 87305.0 True False 96552.48641350157 93302.40444248964 92998.8166121424 95040.6855850336 86802.53118833096 96200.80408700847 91031.4947404852 88964.32933070826 102116.55004615891 86531.54562226229 1.1158067929929725 1.0782472885643843 1.0747388821426096 1.0983356982887653 1.003131639035452 1.111742583530815 1.0520035680151447 1.0281144141243685 1.1801077781729465 1.0 16.400938551792247 -1.6789494063447366 0.9224911103814948 1.067883395872603 7.743267002016991 0.07314419087522883 0.051060412678006574 730.0922400575935 5.946715875477011 0.015795012511298712 10079.108983289992 0.020943564261973864 1.6789494063447366 6.675383606144388 SLSFPILNPALSQPSQPSS(ph)PLPGSHGR ddPTM_KYSE-520_SHP099_60min_R1 2 SLSFPILNPALSQPSQPSSPLPGSHGR 27 0 Q8ND24;E9PN76;Q8ND24-2 Q8ND24 RNF214 RING finger protein 214 1 SLSFPILNPALSQPSQPS(0.16)S(0.828)PLPGS(0.012)HGR;SLSFPILNPALSQPS(0.003)QPS(0.207)S(0.711)PLPGS(0.079)HGR 150.23 6.5323e-07 432420000.0 290571.0 356200.0 289970.0 325170.0 228176.0 376466.0 247208.0 330608.0 407680.0 369760.0 True False 274452.4473910724 339087.61733289965 308661.93016840407 356074.05903407425 246132.15305615272 374116.33605102816 272198.197157581 329461.19801248715 333655.5887764729 366484.214068927 0.7488793155479663 0.9252448108696035 0.8422243532441812 0.9715945335836625 0.6716036969872353 1.020825240731012 0.7427282996325374 0.8989778696184805 0.9104228121370603 1.0 18.483391531527257 -8.019334587720701 1.8193052130375842 0.9983606428562526 0.8532652480673042 0.1700723836753254 0.1024183112362343 0.6531638420221942 4.916801134455504 0.08958119100205117 0.025477615684577105 9.564569169935586e-09 8.019334587720701 -0.1450953947889484 SLSGS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 6 SLSGSPLK 8 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 S(0.007)LS(0.346)GS(0.648)PLK;S(0.01)LS(0.311)GS(0.68)PLK;SLS(0.004)GS(0.996)PLK;SLS(0.001)GS(0.999)PLK;SLS(0.007)GS(0.993)PLK;SLS(0.006)GS(0.994)PLK 143.39 0.00055818 13608790000.0 13471200.0 11739200.0 11083720.0 8249110.0 9156590.0 10065790.0 10169790.0 10754400.0 12088000.0 11077000.0 True False 12723925.681828579 11175231.211101573 11798194.325779032 9033102.934214637 9877161.539129602 10002965.670894774 11197851.620785726 10717095.49649584 9893123.913682312 10978866.397775583 1.1589471281303287 1.0178857093447986 1.074627734623809 0.8227719153267795 0.899652221028102 0.9111109752571053 1.0199460686628368 0.9761568369815684 0.9011061393084032 1.0 23.38822576347843 -5.177529823869396 11.127741888822621 0.9333190287754717 1.0775362624350688 0.5509074618662095 0.062340284079133605 0.5820389944367741 75.31119598719384 0.017460884616151678 0.030267750876509944 6.6446204140562324e-06 5.177529823869396 0.14421723365959715 SLSGSS(ph)PCPK ddPTM_KYSE-520_SHP099_60min_R1 10 SLSGSSPCPK 10 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SLSGS(0.023)S(0.977)PCPK;SLSGS(0.061)S(0.939)PCPK;SLSGS(0.015)S(0.985)PCPK;SLSGS(0.034)S(0.966)PCPK;SLSGS(0.016)S(0.984)PCPK;SLSGS(0.004)S(0.996)PCPK;SLSGS(0.173)S(0.827)PCPK;SLSGS(0.013)S(0.987)PCPK;SLS(0.001)GS(0.088)S(0.91)PCPK;SLSGS(0.02)S(0.98)PCPK 235.49 1.6505999999999998e-13 18719360000.0 45815700.0 44950000.0 35622100.0 28514020.0 31151270.0 37480200.0 27279810.0 29322150.0 38532800.0 33773500.0 True False 43274211.789666384 42790534.52867443 37918357.563375175 31223983.88774732 33602697.72251918 37246272.16922577 30037519.420088965 29220438.305491243 31536214.85284066 33474293.06538538 1.292759542528316 1.2783103274232446 1.13276051832698 0.932775005188533 1.0038359184130636 1.1126828607395107 0.8973309566662585 0.8729217447076455 0.9421024901479153 1.0 24.996550252193323 -4.987722416580683 2.471796624505288 0.964908348575905 1.2921535083367617 0.8042113063240128 0.0635689117187216 0.1303438013228571 1.5860252213924184 0.01992779004842325 0.0483820872513131 1.0286735744811907e-05 4.987722416580683 0.32724515976085666 SLSKS(ph)DSDLLTCSPTEDATMGSR ddPTM_KYSE-520_SHP099_60min_R1 6 SLSKSDSDLLTCSPTEDATMGSR 23 1 Q92625;A0A3B3ISP1 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 SLS(0.013)KS(0.987)DSDLLTCSPTEDATMGSR;S(0.001)LS(0.04)KS(0.959)DSDLLTCSPTEDATMGSR;S(0.001)LS(0.069)KS(0.929)DS(0.001)DLLTCSPTEDATMGSR;S(0.011)LS(0.236)KS(0.753)DSDLLTCSPTEDATMGSR;SLS(0.006)KS(0.993)DS(0.001)DLLTCSPTEDATMGSR;S(0.007)LS(0.21)KS(0.767)DS(0.016)DLLTCSPTEDATMGSR 234.18 2.4140999999999997e-28 17652750000.0 4153840.0 3886700.0 3684090.0 3361640.0 3545320.0 3670410.0 3209220.0 3241970.0 4842330.0 3246830.0 True False 3923418.2147252485 3699977.0979443598 3921572.3361524185 3681129.2548860777 3824316.513888567 3647501.609720544 3533639.2765689287 3230724.3627514876 3963084.9372055964 3218065.612195519 1.2191852769740466 1.1497519142936485 1.2186116781742475 1.1438950284095155 1.1883898511564017 1.1334453828093465 1.0980631542058927 1.0039336521008135 1.2315115397854768 1.0 21.617762310371273 -6.551983794871013 2.3247467316744577 1.0826978471771718 1.1821610791521397 0.35686363211789895 0.06374155937857136 0.343048470647532 3.743165365087077 0.026007837206868067 0.019812008347275506 2.8055383209814474e-07 6.551983794871013 0.09946323197496798 SLSLASTSRDS(ph)PGAVAAPLISGVEIK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSLASTSRDSPGAVAAPLISGVEIK 26 1 Q5THJ4-2;Q5THJ4;H3BLS7;A0A2R8YD87 Q5THJ4-2 VPS13D Vacuolar protein sorting-associated protein 13D 1 SLSLAS(0.036)T(0.032)S(0.032)RDS(0.901)PGAVAAPLISGVEIK 115.92 0.00022909999999999999 116170000.0 95709.0 113590.0 95192.0 93679.0 86108.0 138370.0 68582.0 99946.0 124330.0 85979.0 True False 90399.8309788386 108132.96589793409 101328.22863258517 102582.22399438171 92884.20971249911 137506.3815042545 75514.9378558187 99599.31065357183 101754.80610424552 85217.29295064976 1.0608155674598827 1.2689087173956 1.1890571165087986 1.203772385186985 1.0899690250227656 1.613597155496196 0.8861457016658603 1.1687687698698765 1.1940628783311953 1.0 16.378858602519426 -8.558950882269222 0.6127443685783388 0.9967523799947796 1.2044778717313478 0.09319567391347905 0.17465212628529878 4.722543717477492 2.964153073518798 0.23216220428617634 0.07134534194219405 2.760890089033614e-09 8.558950882269222 0.20772549173656818 SLSLEAT(ph)SPLSAEK ddPTM_KYSE-520_SHP099_60min_R1 2 SLSLEATSPLSAEK 14 0 H3BN63;Q86YC2 H3BN63 PALB2 Partner and localizer of BRCA2 1 SLSLEAT(0.741)S(0.259)PLSAEK;SLSLEAT(0.642)S(0.354)PLS(0.004)AEK 181.87 1.2092e-08 665800000.0 1581150.0 1867580.0 1353290.0 1090690.0 1273890.0 1780590.0 1269620.0 1685000.0 1974550.0 1906320.0 True False 1493440.4575556195 1777858.653505269 1440525.238740558 1194348.849672095 1374137.8955573856 1769476.6773336742 1397965.5798971239 1679155.128281956 1616021.4943548457 1889431.4878945183 0.7904178940194492 0.9409489917448236 0.7624119995723172 0.6321207502490676 0.7272758522134357 0.9365127492955485 0.7398868860044998 0.8887091905899784 0.8552951005149458 1.0 20.849520775740604 -8.103548304256803 0.7394393783118126 0.9991239973837157 0.7863449119547729 0.334392693229307 0.08957068642697244 1.0373485585324205 1.2665423137847214 0.09439133538769336 0.035758738827198364 7.878647965824217e-09 8.103548304256803 -0.21277908542894286 SLSLEATS(ph)PLSAEK ddPTM_KYSE-520_SHP099_60min_R1 3 SLSLEATSPLSAEK 14 0 H3BN63;Q86YC2 H3BN63 PALB2 Partner and localizer of BRCA2 1 SLSLEAT(0.223)S(0.775)PLS(0.001)AEK;SLSLEAT(0.004)S(0.996)PLSAEK;SLSLEAT(0.206)S(0.794)PLSAEK 385.68 1.9044e-81 1484910000.0 3382200.0 4077600.0 2893450.0 2401990.0 2785080.0 3698800.0 2702620.0 3784400.0 4388900.0 3801700.0 True False 3194582.6237514587 3881705.975397619 3079966.41668369 2630274.407415374 3004249.951062463 3675714.4171998026 2975827.204629391 3771272.7996856025 3591986.395165479 3768019.895677841 0.8478146910571913 1.0301713055841832 0.8173965376925446 0.6980521547756334 0.7973020403922308 0.9755029216846974 0.7897588884928274 1.0008632926836434 0.9532822263719245 1.0 21.845375151928792 -7.274492584895236 24.4274799023265 0.9828045890287979 0.8533238680064111 0.318750982653618 0.0896133328425509 811.0118352557744 1517699.0477708 0.051899930405955204 0.02518982299049111 5.3150507429881664e-08 7.274492584895236 -0.12948072102238672 SLSLGDKEIS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SLSLGDKEISR 11 1 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 SLS(0.355)LGDKEIS(0.645)R 135.5 0.00017830000000000002 2416500000.0 3229700.0 2581400.0 2538600.0 2307100.0 2342800.0 2349700.0 2153100.0 2342300.0 2839900.0 2112000.0 True False 3050542.102752671 2457385.6692396067 2702242.2179036136 2526366.090345091 2527165.0312914355 2335034.6507230382 2370756.360231011 2334175.107996929 2324245.7480531433 2093289.3231111348 1.457295973888037 1.1739350323477198 1.290907180421399 1.2068881556183066 1.2072698233302295 1.1154858647311168 1.1325507344142438 1.1150752465157465 1.1103318219761191 1.0 20.997340296192803 -1.0000000000000002 0.18584766229230804 1.0099743831733892 2.6131983124471656 0.7766428549111333 0.05563321451368342 25.723677073150604 0.29590936738956086 0.11291476347415996 11.757678591922938 0.09999999999999995 1.0000000000000002 1.6032239292737764 SLSNS(ph)NPDISGTPTSPDDEVR ddPTM_KYSE-520_SHP099_60min_R1 4 SLSNSNPDISGTPTSPDDEVR 21 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A0U1RRC1;A0A0U1RQJ5 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 SLSNS(0.998)NPDIS(0.002)GTPTSPDDEVR;SLSNS(0.896)NPDIS(0.051)GT(0.051)PTSPDDEVR;SLSNS(1)NPDISGTPTSPDDEVR;SLSNS(1)NPDISGTPTSPDDEVR 476.43 1.0588999999999998e-143 2030570000.0 1571580.0 1655660.0 1345050.0 1122770.0 1222620.0 1483660.0 1197440.0 1459140.0 1727950.0 1427460.0 True False 1484401.3245329417 1576119.608403675 1431754.0751560917 1229477.723226891 1318833.2382437822 1474399.9276042667 1318488.92108821 1454078.5839058368 1414197.8380747302 1414813.8149470738 1.0491849237339197 1.114012028828426 1.0119734908085072 0.8690031933798186 0.932160277423583 1.0421158685529388 0.9319169117227859 1.0277526050028227 0.9995646233689296 1.0 20.432180780737678 -4.961810348040521 6.692334640878032 0.9701591290174427 1.0784683181262962 0.4256357616117291 0.050529583709370704 0.17822640974444343 22.11635490392765 0.013770252044736935 0.02873814958157075 1.0919170613663105e-05 4.961810348040521 0.10830918910885345 SLSQS(ph)FENLLDEPAYGLIQK ddPTM_KYSE-520_SHP099_60min_R1 3 SLSQSFENLLDEPAYGLIQK 20 0 Q8TC07-2;Q8TC07-3;C9JA93 Q8TC07-2 TBC1D15 TBC1 domain family member 15 1 S(0.028)LS(0.176)QS(0.796)FENLLDEPAYGLIQK;S(0.289)LS(0.22)QS(0.491)FENLLDEPAYGLIQK;S(0.023)LS(0.157)QS(0.82)FENLLDEPAYGLIQK 200.95 1.506e-13 173702000.0 160541.0 179136.0 121076.0 101817.0 104394.0 149796.0 96056.0 123723.0 170735.0 131941.0 True False 151635.47069945073 170530.03767138202 128880.75268844946 111493.65706760269 112609.21387939117 148861.0675999951 105766.27789621952 123293.83379016533 139733.82787909883 130772.10538854462 1.159539874722654 1.30402456368436 0.9855370325768202 0.8525798123104112 0.8611103533495265 1.138324317389441 0.8087831696367598 0.9428144742629924 1.0685293126078188 1.0 16.996695311072415 -4.832802169125917 6.1354394298423305 0.9471698466430716 1.230589681746233 0.5447604713106369 0.10037385162627219 0.1309239946652896 8.447451310446604 0.025976405861153573 0.055901420924323986 1.4695955589237494e-05 4.832802169125917 0.2834198351031614 SLSS(ph)PGGPSKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SLSSPGGPSKPK 12 1 J3KRY8;Q9BZE9-3;Q9BZE9;Q9BZE9-2;J3QL04;J3QR12;Q9BZE9-4 J3KRY8 ASPSCR1 Tether containing UBX domain for GLUT4 1 SLS(0.003)S(0.997)PGGPSKPK;S(0.001)LS(0.027)S(0.972)PGGPSKPK 134.56 7.1222e-05 1237190000.0 1901430.0 1822550.0 1451180.0 1627000.0 1483480.0 1597710.0 1522960.0 1623720.0 2039930.0 1650750.0 True False 1795953.8874932693 1734991.962296676 1544725.3847700965 1781629.5908246147 1600221.436153415 1587738.0992495671 1676915.6594572586 1618087.694299095 1669530.1344505232 1636125.639264067 1.0976870262244 1.060427097198403 0.9441361639347682 1.0889320160192562 0.9780553508550835 0.9704255352686334 1.0249308605734821 0.9889752079350793 1.020416827647467 1.0 20.641852107447065 -4.536765995152083 22.278702676329473 1.0034498837166714 1.088372102175203 0.42570093905495177 0.03690297750503718 46.76787889359329 75027.87533407057 0.008943387946555543 0.02370651836408795 2.9055878101790542e-05 4.536765995152083 0.08492221845853165 SLSS(ph)PTDNLELSLR ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSPTDNLELSLR 14 0 J3QRU8;A0A0C4DGN6;Q9Y2X7;Q9Y2X7-3 J3QRU8 GIT1 ARF GTPase-activating protein GIT1 1 SLS(0.041)S(0.954)PT(0.004)DNLELSLR 81.904 0.010713 127740000.0 316030.0 297920.0 293000.0 265600.0 250110.0 328320.0 253670.0 310680.0 367890.0 294640.0 True False 298499.18590981374 283607.47601296287 311887.2488165752 290842.5441444484 269792.2340687641 326270.8330958798 279313.4391806235 309602.3235932574 301090.44975219906 292029.71882645163 1.0221534544818256 0.9711596379733737 1.0679983190406883 0.9959347470292613 0.923851980383877 1.1172521564141802 0.9564555289203795 1.0601740289906894 1.0310267426279722 1.0 18.155755668959365 -6.250226651159374 24.99948439827698 1.0319596873823622 0.9987992935196992 0.11186947620490395 0.05149485975986897 1937.4991368068947 4319779.7934203455 0.01656270590022612 0.016375842628818384 5.620479250528959e-07 6.250226651159374 -0.03316039386266301 SLSS(ph)PTVTLSAPLEGAK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSPTVTLSAPLEGAK 17 0 A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 SLS(0.048)S(0.951)PTVTLSAPLEGAK 402.46 2.8060999999999994e-87 12893000000.0 9078100.0 11649000.0 8712000.0 7777000.0 7474300.0 12562000.0 8644200.0 10665000.0 13097000.0 12497000.0 True False 8574519.6962563 11089364.554494519 9273589.459692853 8516123.741759688 8062484.887050355 12483595.898362698 9518040.095262146 10628005.604229713 10718914.948502421 12386286.30251888 0.6922591232621986 0.8952937372551595 0.7486981354376551 0.687544558051096 0.6509202750634598 1.0078562366045123 0.7684337228121841 0.8580461766064941 0.8653856924268429 1.0 23.562240362905083 -6.252899545399107 24.997337173674 0.8828528384511369 0.7419824436075093 0.45141280438863607 0.08979932905673796 710.4077828305682 2079468.0795307504 0.030268198817459575 0.02981812632784342 5.585993867749012e-07 6.252899545399107 -0.14087039484362762 SLSS(ph)SLDDTEVKK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSSLDDTEVKK 13 1 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 S(0.015)LS(0.084)S(0.501)S(0.4)LDDTEVKK 80.632 0.005991 282610000.0 314110.0 403850.0 292360.0 407610.0 363580.0 378560.0 331440.0 407000.0 524630.0 314710.0 True False 296685.6921372388 384448.4398087911 311205.99339253927 446349.1318475845 392191.6775127798 376197.2666202984 364945.1897426807 405588.2119945142 429370.4168460582 311921.91424067534 0.9511537298027722 1.2325150053809786 0.9977048074679881 1.4309643262293739 1.2573392878391008 1.2060623170260136 1.1699889397995076 1.3002876472525333 1.3765317447839236 1.0 18.250825388020107 -3.3979368285560954 0.9088677903723443 1.2450405783271643 1.9759601648178276e-12 0.25902761824887566 0.1339352131897443 11.741042023695766 2.4009105894831904 0.04313073147854164 21.007025597362496 0.00040000292900574884 3.3979368285560954 -1.2450405783251883 SLSS(ph)SPDKR ddPTM_KYSE-520_SHP099_60min_R1 4 SLSSSPDKR 9 1 Q9BVI0;Q5JWZ0;Q5JXL1;B0QYY0;Q9BVI0-2 Q9BVI0 PHF20 PHD finger protein 20 1 S(0.05)LS(0.247)S(0.351)S(0.351)PDKR;S(0.014)LS(0.126)S(0.778)S(0.081)PDKR;SLS(0.165)S(0.646)S(0.189)PDKR;SLS(0.014)S(0.776)S(0.21)PDKR 169.58 9.3249e-05 4132890000.0 5304810.0 4877350.0 4743190.0 4676080.0 4845030.0 4771600.0 4712570.0 4744980.0 5652770.0 4685740.0 True False 5010541.614423443 4643034.784948401 5048943.616772331 5120493.237285288 5226306.296550259 4741818.674464854 5188962.56585103 4728520.771866659 4626369.462735435 4644227.989050552 1.0788750307341777 0.9997430780519466 1.0871437898130658 1.1025499285042855 1.1253337064571425 1.0210133278651234 1.1172928155303248 1.0181500096495777 0.9961546835432668 1.0 22.147007366376712 -7.442691714054853 6.275870355646794 1.000781736415523 1.0741925499133724 0.43944787899067894 0.037242984834586844 0.2230402996489004 14.067356066683235 0.021440595234800897 0.01000796245108926 3.608346923060004e-08 7.442691714054853 0.0734108134978495 SLSS(ph)SPVKK ddPTM_KYSE-520_SHP099_60min_R1 1 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 SLS(0.021)S(0.697)S(0.282)PVKK 95.48299999999999 0.016128999999999998 0.0 1094000.0 1181600.0 1019500.0 1276600.0 1071000.0 1310600.0 1068200.0 1185100.0 1472200.0 1242200.0 True False 1033313.6391650671 1124834.1623822418 1085218.6012576746 1397927.6801762132 1155281.6068435735 1302420.0592576156 1176184.0806273594 1180989.1647044183 1204885.5911418835 1231195.0744169774 0.8392769437080347 0.9136116491652617 0.8814351387586336 1.1354233859635856 0.9383416412631832 1.0578502841025141 0.955319027071589 0.9592218075301076 0.9786309384907567 1.0 20.231627934393696 -5.105140508738806 24.998106559131166 1.0000760652714054 0.8816030873628802 0.5038501395197376 0.05693532142181758 25.569827932765495 6067.523813007564 0.014834407945352323 0.02569395246906481 7.849816258047777e-06 5.105140508738806 -0.11847297790852518 SLSSS(ph)LDDTEVKK ddPTM_KYSE-520_SHP099_60min_R1 3 SLSSSLDDTEVKK 13 1 O95292 O95292 VAPB Vesicle-associated membrane protein-associated protein B/C 1 SLS(0.016)S(0.129)S(0.855)LDDTEVKK;SLSS(0.002)S(0.998)LDDTEVKK;S(0.007)LS(0.007)S(0.036)S(0.949)LDDT(0.002)EVKK 236.12 6.0332e-16 2285610000.0 1336590.0 1552570.0 1113350.0 1474240.0 1397080.0 1476290.0 1254410.0 1591490.0 2018140.0 1128460.0 True False 1262446.6882738937 1477982.2067449177 1185118.3224229831 1614351.3263535819 1507022.2477021671 1467075.9265080288 1381218.0046618304 1585969.4926465577 1651696.6491693268 1118462.722328595 1.1287338085309897 1.3214407393639527 1.0595957279252133 1.4433662330672645 1.3474049850893615 1.311689605044355 1.234925382033466 1.4179904801338683 1.476756101205197 1.0 20.093085742388265 -5.265146770567283 24.99743591725134 1.3336836969173165 1.185075159928004 0.18239173782419227 0.14102930936882993 516.7918497200684 3484520.2825897676 0.03744223227833751 0.058087861542062434 5.430667701275291e-06 5.265146770567283 -0.14860853698931242 SLSSS(ph)PDKR ddPTM_KYSE-520_SHP099_60min_R1 3 SLSSSPDKR 9 1 Q9BVI0;Q5JWZ0;Q5JXL1;B0QYY0;Q9BVI0-2 Q9BVI0 PHF20 PHD finger protein 20 1 SLS(0.006)S(0.083)S(0.911)PDKR;SLS(0.002)S(0.021)S(0.976)PDKR;S(0.059)LS(0.144)S(0.108)S(0.69)PDKR 143.24 0.00039572 4222800000.0 6320250.0 5872730.0 5291360.0 5536270.0 5711960.0 5655370.0 5881620.0 5497960.0 6844230.0 5749090.0 True False 5969653.133393988 5590595.235652556 5632449.5320753455 6062435.436259723 6161458.755393294 5620072.738077018 6476191.548679544 5478888.859993509 5601490.360997835 5698157.535324336 1.0476462078113111 0.9811233194229935 0.9884685527134605 1.0639290680675526 1.0813071974926693 0.9862964832468654 1.136541330865631 0.9615193728900044 0.9830353629700063 1.0 22.442064077312622 SLSSS(ph)PQAQPPRPAELSDEEVAELFQR ddPTM_KYSE-520_SHP099_60min_R1 10 SLSSSPQAQPPRPAELSDEEVAELFQR 27 1 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 S(0.013)LS(0.101)S(0.17)S(0.714)PQAQPPRPAELS(0.002)DEEVAELFQR;S(0.001)LS(0.041)S(0.175)S(0.782)PQAQPPRPAELS(0.002)DEEVAELFQR;SLSS(0.022)S(0.978)PQAQPPRPAELSDEEVAELFQR;S(0.004)LS(0.044)S(0.173)S(0.779)PQAQPPRPAELS(0.001)DEEVAELFQR;SLSS(0.027)S(0.973)PQAQPPRPAELSDEEVAELFQR;SLSS(0.014)S(0.986)PQAQPPRPAELSDEEVAELFQR;SLS(0.006)S(0.013)S(0.982)PQAQPPRPAELSDEEVAELFQR;SLS(0.001)S(0.091)S(0.908)PQAQPPRPAELSDEEVAELFQR;SLS(0.001)S(0.126)S(0.874)PQAQPPRPAELSDEEVAELFQR;SLSS(0.041)S(0.959)PQAQPPRPAELSDEEVAELFQR 299.52 1.4990000000000002e-52 16293760000.0 5435450.0 5760450.0 4693540.0 3891640.0 4210390.0 4706210.0 4086880.0 4621540.0 5941620.0 5131060.0 True False 5133934.75319906 5483709.335388278 4996093.098329526 4261500.295535768 4541723.739157903 4676836.797710042 4500021.7145051 4605508.956415545 4862771.584051373 5085602.800304273 1.009503682216766 1.0782810908984448 0.9823993918735865 0.8379538203968272 0.8930551436077883 0.9196229004416597 0.8848551275447352 0.9055974556526507 0.9561839127036096 1.0 22.277987357264774 -5.013751841519215 6.337537257220874 0.9080312587652725 1.0415036795092736 0.590949355841582 0.043572568218003475 0.08967989391803131 15.82793301831777 0.011230755507125835 0.021365205323647548 9.68831294159765e-06 5.013751841519215 0.13347242074400112 SLSSS(ph)PVKK ddPTM_KYSE-520_SHP099_60min_R1 2 SLSSSPVKK 9 1 Q9H3Q1;Q9H3Q1-2 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 SLSS(0.006)S(0.994)PVKK;SLSS(0.001)S(0.999)PVKK 201.09 1.9813999999999998e-06 3630600000.0 8526900.0 7510300.0 6887100.0 6879200.0 7078300.0 7852800.0 7491700.0 8470100.0 9598600.0 7689000.0 True False 8053895.859046265 7149493.914809882 7331053.485749618 7532997.099693107 7635321.939982148 7803787.762351748 8249034.147946075 8440719.200036205 7855736.201015141 7620881.441951472 1.056819466408588 0.9381452748304555 0.9619692343452022 0.9884679557177496 1.0018948592942523 1.0240006778472384 1.0824252038008022 1.1075778129248521 1.0308172697413764 1.0 22.861526440847083 -6.3760719037258795 2.189519117021156 1.0634705666307396 0.9828925766151505 0.3663571778943481 0.039672548500809306 0.2894358601199466 2.726794765424558 0.01601381616294153 0.013657996999180156 4.2065697677880794e-07 6.3760719037258795 -0.08057799001558907 SLSVLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 SLSVLSPR 8 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6 A0A087WVP4 SMTN Smoothelin 1 SLSVLS(1)PR;SLS(0.001)VLS(0.999)PR;SLSVLS(1)PR;SLSVLS(1)PR;SLSVLS(1)PR;SLSVLS(1)PR;SLSVLS(1)PR;SLSVLS(1)PR 142.94 0.00056764 6408620000.0 4842840.0 4468410.0 4236910.0 3633190.0 3990010.0 4202810.0 3779320.0 3799210.0 4686890.0 4270290.0 True False 4574198.011237806 4253740.876379848 4510027.997895686 3978487.2852415927 4304001.08694858 4176578.703836791 4161370.548208749 3786031.427252278 3835868.9228820726 4232458.552835347 1.0807425410400122 1.005028359587891 1.065581137203197 0.939994387559066 1.0169033041245747 0.9867973074512161 0.9832040872369616 0.8945229776003347 0.9062980475762493 1.0 22.01306450964552 -5.295694971196228 0.49974198382243085 0.9365886782861348 1.0842666179689837 0.46557568820505846 0.04239511694410581 1.6320471835274957 0.633377462756958 0.03250873736232988 0.12795012859795332 5.0618005516197515e-06 5.295694971196228 0.14767793968284892 SLSVS(ph)SDFLGK ddPTM_KYSE-520_SHP099_60min_R1 3 SLSVSSDFLGK 11 0 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 SLSVS(0.967)S(0.033)DFLGK;SLSVS(0.983)S(0.016)DFLGK;SLS(0.001)VS(0.923)S(0.076)DFLGK 179.67 4.2654e-06 1658460000.0 2728120.0 2719290.0 2695680.0 2494630.0 2860780.0 3204590.0 2922750.0 3347800.0 3837180.0 3270430.0 True False 2576785.7452276074 2588651.2266624956 2869447.8460405017 2731718.885162145 3085907.1103883837 3184588.9651277 3218210.0932911593 3336187.2631823923 3140444.839436092 3241456.534556037 0.7949468758125843 0.798607415853271 0.8852340962929226 0.8427442589589721 0.952012491141129 0.9824561678300815 0.9928283964270211 1.0292247412903626 0.9688375598922601 1.0 21.628210796939378 -5.65554003442588 0.9071986151376015 1.005578643007728 0.7962953426839414 0.9019958121063747 0.02586768352189554 0.16908068734308732 0.2941936160577418 0.012064143054847319 0.022299941983511137 2.2103444914459654e-06 5.65554003442588 -0.20928330032378661 SLSYS(ph)PVER ddPTM_KYSE-520_SHP099_60min_R1 5 SLSYSPVER 9 0 Q9UQ35;Q9UQ35-2;I3L4U6 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.006)LS(0.252)Y(0.021)S(0.72)PVER;SLSYS(1)PVER;SLSYS(1)PVER;SLSYS(1)PVER;SLSYS(1)PVER 217.45 5.9131e-09 4144300000.0 2841250.0 2712670.0 2572930.0 2326560.0 2454480.0 2549530.0 2328030.0 2370480.0 2974960.0 2500110.0 True False 2683640.198608546 2582349.261399315 2738785.1846335563 2547675.5628942302 2647633.6119191563 2533617.437569868 2563369.991783289 2362257.358154193 2434782.256638678 2477960.970456145 1.0830034171662275 1.0421266889138914 1.1052575957761752 1.028133854112017 1.068472685198015 1.0224605906942423 1.0344674602810318 0.9533069270737331 0.9825749015693663 1.0 21.24072203356911 -6.773456374961762 1.2266859294036396 0.9763904420170743 1.065959750372416 0.6665470252451228 0.02528450363287453 0.26168587058827364 0.7874772815746833 0.01581590813262093 0.008961211724556809 1.6847816552027643e-07 6.773456374961762 0.08956930835534183 SLT(ph)AHSLLPLAEK ddPTM_KYSE-520_SHP099_60min_R1 3 SLTAHSLLPLAEK 13 0 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 S(0.391)LT(0.534)AHS(0.075)LLPLAEK;S(0.365)LT(0.527)AHS(0.108)LLPLAEK;S(0.346)LT(0.486)AHS(0.167)LLPLAEK 125.67 8.9484e-05 237973000.0 998110.0 1184160.0 1048400.0 1111350.0 1166920.0 1038990.0 1030590.0 1095280.0 1335280.0 1106130.0 True False 942742.8486170449 1127271.1761396034 1115981.54149931 1216972.3698604396 1258749.9651334293 1032505.2780162286 1134772.0947891325 1091480.7293202735 1092826.8116695657 1096330.5487561177 0.8599074883817373 1.028221987810693 1.0179243320050582 1.110041466272376 1.1481482173068975 0.9417828219670569 1.0350638282191718 0.9955763164299793 0.9968041234548036 1.0 20.064251412470306 -4.259814119068532 5.318208938287222 1.0338687740869106 0.852658918429635 0.4522799106393415 0.056201231109523284 0.1513626085659876 15.359811503130569 0.014854441106839082 0.10032540413668747 5.497761313549017e-05 4.259814119068532 -0.18120985565727554 SLT(ph)EGLVLDTMNDS(ph)LSK ddPTM_KYSE-520_SHP099_60min_R1 2 SLTEGLVLDTMNDSLSK 17 0 A0A0D9SFF0;Q08050-2;Q08050;Q08050-3 A0A0D9SFF0 FOXM1 Forkhead box protein M1 2 S(0.376)LT(0.624)EGLVLDT(0.002)MNDS(0.974)LS(0.024)K;S(0.386)LT(0.614)EGLVLDTMNDS(0.862)LS(0.138)K 131.67 7.1813e-05 38538000.0 213974.0 195589.0 196145.0 183235.0 184831.0 179226.0 180161.0 189581.0 236513.0 213879.0 True False 202104.43567340626 186192.61085492544 208788.82054309623 200649.5993083883 199376.14815546633 178107.38405349074 198373.43208191896 188923.38775953793 193568.20120754014 211984.19845534384 0.9533938715530308 0.8783324993638543 0.9849263391539028 0.9465309243351775 0.9405236315171223 0.8401917942530536 0.9357934861532045 0.8912144826650188 0.9131256132202553 1.0 17.693597203094424 -3.868656220551282 19.12940255707018 0.9224359666227303 11.031043275473017 0.028170957015528075 0.04558296100695161 1636.0662840461043 237588.1935153687 0.010759284109102693 2118.9121952380706 0.00013531432624494985 3.868656220551282 10.108607308850287 SLT(ph)NDWEDHLAVK ddPTM_KYSE-520_SHP099_60min_R1 1 SLTNDWEDHLAVK 13 0 P08238;P07900;P07900-2 P08238;P07900 HSP90AB1;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha 1 S(0.358)LT(0.642)NDWEDHLAVK 265.6 4.6509e-22 703570000.0 1276200.0 1175500.0 923760.0 852950.0 962880.0 976950.0 992590.0 977930.0 1069900.0 1061400.0 True False 1205406.6419583715 1119027.2155385271 983307.0476682588 934014.1115512309 1038653.1779622218 970852.4926687969 1092930.6839448705 974537.7890805766 875633.1299841751 1051996.8217567042 1.1458272658518986 1.0637172968544624 0.9347053406741838 0.887848795960755 0.9873158896314913 0.9228663742991102 1.0389106329426088 0.9263695183538857 0.8323533986746997 1.0 20.004698915358603 -4.594098838866865 3.029487633403316 0.9409626429785466 1.1371405124567326 0.5970148731208385 0.055542769600140554 0.17413286088598737 3.0541019545476815 0.01478923694079681 0.05637845233434203 2.546250698424384e-05 4.594098838866865 0.19617786947818605 SLT(ph)NLVAAGDDVLEDQEILMHHPPQVDELDR ddPTM_KYSE-520_SHP099_60min_R1 1 SLTNLVAAGDDVLEDQEILMHHPPQVDELDR 31 0 Q7Z5Y7-2;Q7Z5Y7-3;Q7Z5Y7 Q7Z5Y7-2 KCTD20 BTB/POZ domain-containing protein KCTD20 1 S(0.469)LT(0.531)NLVAAGDDVLEDQEILMHHPPQVDELDR 133.66 1.5821e-05 59563000.0 15232.0 9654.9 9289.9 15702.0 11193.0 5806.4 11599.0 18362.0 13534.0 6325.8 True False 14387.050595760791 9191.064111699648 9888.741818365545 17194.313359021562 12073.825420541669 5770.1601038252775 12771.540115331152 18298.30650772302 11076.566764375939 6269.7583333979255 2.2946738663153003 1.4659359456871612 1.5772125961681673 2.7424204322884997 1.9257242111273214 0.9203161903527646 2.0370067610579743 2.9185026813954034 1.7666656632318618 1.0 12.614194120364422 -6.978054745380276 24.99612917559649 2.101102350394518 1.8103112345502252 0.0 0.6382940505097402 892.3673541478256 1016424.2249803588 0.26778470074861105 0.1805284915949232 1.0518292761836316e-07 6.978054745380276 -0.2907911158442926 SLT(ph)PALCR ddPTM_KYSE-520_SHP099_60min_R1 2 SLTPALCR 8 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 S(0.004)LT(0.996)PALCR;S(0.004)LT(0.996)PALCR 134.25 0.0035368 434290000.0 890960.0 989640.0 692830.0 634860.0 688020.0 823550.0 678370.0 875990.0 1031050.0 914880.0 True False 841536.6727152723 942096.2089200744 737490.9303671943 695196.9035223816 742163.2597016956 818409.9189696391 746946.2598531942 872951.395147602 843837.310655373 906774.8749658697 0.9280546869441515 1.0389527047223648 0.8133120477063868 0.7666697906120835 0.818464737159408 0.9025502818441495 0.8237394754473195 0.9626991431367782 0.9305918524563601 1.0 19.790384891690724 -7.2810033155386975 23.269138722426472 0.9599841734761565 0.8698146455432745 0.25538114303587367 0.0735764200979994 579.6820131894359 689459.9159266752 0.044323484954668806 0.021355497835865992 5.2359643927297e-08 7.2810033155386975 -0.09016952793288202 SLT(ph)PPPSSTESK ddPTM_KYSE-520_SHP099_60min_R1 2 SLTPPPSSTESK 12 0 Q9UGU0;Q9UGU0-2 Q9UGU0 TCF20 Transcription factor 20 1 SLT(0.999)PPPSSTESK;SLT(1)PPPSSTESK 174.9 8.0219e-05 0.0 735360.0 888810.0 633150.0 559530.0 569930.0 845290.0 631020.0 823880.0 945020.0 806120.0 True False 694568.1148961836 846110.2334689907 673963.8620758181 612707.5629711715 614780.2485418847 840014.2315655948 694809.6597617271 821022.152575038 773428.1900155578 798978.4039518698 0.8693202612996085 1.0589901169843885 0.8435320138094965 0.766863734915269 0.7694579046205595 1.051360371457796 0.8696225784390315 1.0275899179679155 0.9680213960603482 1.0 19.607796982680664 -6.268849431228703 24.995246990720577 0.9779372023130168 0.8663265526473061 0.3228814781803635 0.08780529755444558 854.5698202360282 2882587.4862110848 0.032998544542509375 0.029669709647814 5.384564316083396e-07 6.268849431228703 -0.11161064966571077 SLT(ph)RS(ph)PPAIR ddPTM_KYSE-520_SHP099_60min_R1 1 SLTRSPPAIR 10 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.378)LT(0.629)RS(0.993)PPAIR 57.425 0.04115 406780000.0 283560.0 296730.0 217700.0 254280.0 307860.0 365650.0 315200.0 330900.0 490610.0 252370.0 True False 267830.36153715383 282474.64539918955 231733.29033231552 278446.6947479305 332086.8305162121 363367.8427190193 347063.49205555476 329752.18513264065 401527.59127164725 250134.19814088917 1.0707466772947904 1.129292385841957 0.9264358574503705 1.11318922729268 1.3276346576534999 1.4526915768404878 1.3875091636213204 1.3183010863109021 1.6052486795327565 1.0 17.93234278951437 -5.743898014972327 3.502541717331806 1.3760187445822119 1.0469451261274205 0.47046804745471815 0.15030707906099805 0.18350406600594646 4.739198429667394 0.04436591980279146 0.055516745490363444 1.8034411917986026e-06 5.743898014972327 -0.32907361845479133 SLTEISTDFDRS(ph)SPPLQPPPVNSLTTENR ddPTM_KYSE-520_SHP099_60min_R1 3 SLTEISTDFDRSSPPLQPPPVNSLTTENR 29 1 J3KRR7;Q9NQC7-2;Q9NQC7 J3KRR7 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD 1 SLTEISTDFDRS(0.5)S(0.5)PPLQPPPVNSLTTENR;SLTEIS(0.001)T(0.001)DFDRS(0.544)S(0.453)PPLQPPPVNSLTTENR;SLTEISTDFDRS(0.5)S(0.5)PPLQPPPVNSLTTENR 184.84 2.1177e-15 8167400000.0 838680.0 1023500.0 766200.0 712420.0 627210.0 921540.0 719340.0 765520.0 1048150.0 953070.0 True False 792156.748532869 974329.5236951794 815590.4779633452 780128.1826031158 676567.8586632668 915788.3270320942 792057.9072818613 762864.5897937102 857832.3817112928 944626.5412772387 0.838592516638148 1.031444153980449 0.8633999176654272 0.8258588431659954 0.7162278732381082 0.9694713063999323 0.8384878813704643 0.8075832685817123 0.9081180172551676 1.0 19.849384546058165 -8.01417228787801 22.173799108396647 1.0000000075933069 0.8635558748012269 0.21128269683603296 0.08180201078885858 286.48029566632323 448226.9549049689 0.08093655336138227 0.02089772820681552 9.678938093561456e-09 8.01417228787801 -0.13644413279208 SLTEISTDFDRSS(ph)PPLQPPPVNSLTTENR ddPTM_KYSE-520_SHP099_60min_R1 4 SLTEISTDFDRSSPPLQPPPVNSLTTENR 29 1 J3KRR7;Q9NQC7-2;Q9NQC7 J3KRR7 CYLD Ubiquitin carboxyl-terminal hydrolase CYLD 1 SLTEIS(0.004)T(0.004)DFDRS(0.184)S(0.808)PPLQPPPVNSLTTENR;SLTEISTDFDRS(0.18)S(0.82)PPLQPPPVNSLTTENR;SLTEISTDFDRS(0.113)S(0.887)PPLQPPPVNSLTTENR;SLTEISTDFDRS(0.134)S(0.866)PPLQPPPVNSLTTENR 199.75 7.38e-16 3270570000.0 425193.0 544780.0 394958.0 368741.0 355677.0 473760.0 377784.0 426575.0 569798.0 515654.0 True False 401606.6966887687 518607.95106854907 420417.6246351434 403786.0337739762 383666.7563746987 470803.0881076507 415974.09353653464 425095.31088835356 466337.04663867847 511085.7067327416 0.7857912897939405 1.0147181661250038 0.8225971086587036 0.7900554221234074 0.7506896618717745 0.9211822633769025 0.8139028113225185 0.831749558417304 0.9124439218225618 1.0 18.963205719239745 -8.024382021845856 3.2312025733535674 0.9996775200069934 0.8437022061305695 0.32407458733141914 0.07191565338610689 0.2934587829897731 7.8122241481015715 0.06993243472237928 0.018609923649621753 9.454051813580077e-09 8.024382021845856 -0.15597531387642394 SLTNDWEDHLAVK ddPTM_KYSE-520_SHP099_60min_R1 12 SLTNDWEDHLAVK 13 0 P08238;P07900;P07900-2 P08238;P07900 HSP90AB1;HSP90AA1 Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha 0 ;;;;;;;;;;; 220.4 3.5026e-11 9499510000.0 9301340.0 7925630.0 4888972.0 5181218.0 7378470.0 6879450.0 5110900.0 4926887.0 5178103.0 5565223.0 False True 8785376.128438408 7544870.838186836 5204122.957751784 5673639.400930011 7959113.611248465 6836512.800747595 5627559.649577211 4909796.7789410725 4237890.0245541055 5515919.453897982 1.592731040013641 1.3678355714304418 0.9434733413436887 1.0285935913949162 1.4429350678106676 1.2394149076844074 1.020239634862749 0.8901139365752385 0.768301651243163 1.0 22.39516995940479 -6.927109346530991 2.6884822869168037 0.8755196671285046 1.2573063179898452 0.4748292691160313 0.18375851608252988 0.2765040831578529 4.032311407420758 0.09947172527777813 0.0596272798457477 1.1827437273815056e-07 6.927109346530991 0.38178665086134056 SLTNPT(ph)PIQQQLR ddPTM_KYSE-520_SHP099_60min_R1 2 SLTNPTPIQQQLR 13 0 Q9UJF2-2;Q9UJF2;H0Y638 Q9UJF2-2 RASAL2 Ras GTPase-activating protein nGAP 1 SLT(0.003)NPT(0.997)PIQQQLR;SLT(0.031)NPT(0.969)PIQQQLR 166.52 3.9045e-06 637110000.0 1019360.0 1048040.0 956700.0 741830.0 945560.0 964860.0 899360.0 980790.0 1165990.0 939200.0 True False 962814.0687562184 997690.5852598895 1018370.4127741229 812333.3001606776 1019970.1924995419 958837.9508433559 990276.085707752 977387.8684081072 954275.6082159511 930879.4186865435 1.0343058933612843 1.071772095539093 1.093987462104413 0.8726514775746868 1.095706030259756 1.030034536799902 1.0638070472167236 1.0499618412309366 1.0251334265853889 1.0 19.82823477505704 -6.824145990825857 0.0030232843365910157 1.0615096911237342e-06 2.067806081734575 0.020106427110313074 0.060423534786305154 119522.72689343034 231.2915840506124 78759.87890967728 79424.08445504348 1.4991807917214002e-07 6.824145990825857 2.067805020224884 SLTS(ph)SLENIFSR ddPTM_KYSE-520_SHP099_60min_R1 2 SLTSSLENIFSR 12 0 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 1 SLT(0.002)S(0.499)S(0.499)LENIFSR;SLT(0.002)S(0.871)S(0.127)LENIFSR 302.53 2.5626999999999997e-30 17251200000.0 7336760.0 7036790.0 6481560.0 5476250.0 6154800.0 7283430.0 5614850.0 6598210.0 7859670.0 6233990.0 True False 6929775.297331531 6698732.045962877 6899371.72846267 5996711.153505408 6639147.743978374 7237971.411718815 6182453.833655234 6575322.349543794 6432552.054157132 6178761.698570836 1.1215475908278525 1.0841544588962397 1.1166269335259382 0.9705360792426196 1.0745110538109968 1.171427506808197 1.0005975525946003 1.0641812502761974 1.041074630802641 1.0 22.558886302221353 -6.48824212428183 0.010946505997876 6.639869010271112e-07 2.1288440341096586 0.20932555869856806 0.05299019196293107 2996.1797735669197 15.483554646486263 1468.9591150580484 1540.1839007774413 3.2490610790579356e-07 6.48824212428183 2.1288433701227576 SLTSS(ph)LENIFSR ddPTM_KYSE-520_SHP099_60min_R1 10 SLTSSLENIFSR 12 0 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 1 SLTS(0.05)S(0.95)LENIFSR;SLTS(0.007)S(0.993)LENIFSR;SLTS(0.004)S(0.996)LENIFSR;SLTS(0.007)S(0.992)LENIFSR;SLTS(0.005)S(0.995)LENIFSR;S(0.001)LT(0.01)S(0.211)S(0.778)LENIFSR;SLTS(0.025)S(0.975)LENIFSR;SLT(0.007)S(0.224)S(0.769)LENIFSR;SLTS(0.033)S(0.967)LENIFSR;SLT(0.002)S(0.188)S(0.809)LENIFSR 267.07 1.0953e-21 27603474000.0 23279469.0 23058200.0 21380564.0 18422146.0 19724109.0 23661248.0 19419801.0 20939750.0 26086440.0 22078216.0 True False 21988110.448099047 21950449.46093621 22758789.365551956 20172981.217019834 21276284.163471363 23513569.374537706 21382944.004073475 20867114.8946244 21349800.08163786 21882620.182832107 1.0048207328183534 1.0030996872192353 1.0400395005442375 0.9218722917306967 0.9722914342846182 1.074531714121929 0.9771656147854428 0.9535930670220006 0.9756509916663331 1.0 24.383282158212968 -6.973490814490952 24.99888731472791 0.971848973464567 1.0016235866873955 0.0940361520791273 0.038941797685319655 513.2816372225044 484037.75727732107 0.01695638150581978 0.011431700519368336 1.0629410646838626e-07 6.973490814490952 0.029774613222828483 SLVEIIEHGLVDEQQK ddPTM_KYSE-520_SHP099_60min_R1 3 SLVEIIEHGLVDEQQK 16 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 0 ;; 174.62 4.2550999999999995e-08 212120000.0 573846.0 429507.0 265072.0 500608.0 493115.0 373806.0 350244.0 388949.0 326651.0 286465.0 False True 542013.6184463601 408872.8390168494 282158.96525019547 548185.6338067168 531920.3450594478 371472.9380977048 385650.08157203614 387599.8267003786 267339.4126016081 283927.1429663973 1.9089883861878867 1.4400625271154137 0.9937724245109912 1.9307264112878226 1.8734395715114862 1.3083389429296957 1.358271271787769 1.3651383332034972 0.941577511077367 1.0 18.115161249357474 -7.377226067421786 1.0766761521722075 0.9670705283518781 1.5790660862398083 0.40533664116453416 0.27927479969057994 0.5821570695889408 1.1971648596618487 0.26526325731374706 0.0995216548156343 4.195405397290432e-08 7.377226067421786 0.6119955578879301 SLVES(ph)VSSSPNKESNEEEQVWHFLGK ddPTM_KYSE-520_SHP099_60min_R1 1 SLVESVSSSPNKESNEEEQVWHFLGK 26 1 Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2;Q9H2U2-4 Q9H2U2-6 PPA2 Inorganic pyrophosphatase 2, mitochondrial 1 S(0.043)LVES(0.24)VS(0.225)S(0.225)S(0.225)PNKES(0.041)NEEEQVWHFLGK 50.492 0.054505 6419400000.0 59304.0 85408.0 81834.0 83612.0 62074.0 75158.0 54085.0 71782.0 94473.0 61712.0 True False 56014.28890040693 81304.87147997842 87109.15057902955 91558.45934113565 66958.8706472531 74688.91104355549 59552.43961873309 71533.0049960447 77319.08467052509 61165.279691209485 0.9157857069107321 1.3292650976247125 1.4241600957078375 1.4969024878716313 1.0947202560879692 1.2210998040165846 0.9736314444956559 1.1695034398138335 1.2641008928736606 1.0 15.900425322801025 -5.814650279368415 24.99999594403497 1.126669850392587 1.3036997645528416 0.2025689638817122 0.16525584941450855 156.7029565469144 73622.49023081163 0.052617272786296174 0.0596624335473639 1.5323208840350844e-06 5.814650279368415 0.1770299141602547 SLVESVS(ph)SSPNKESNEEEQVWHFLGK ddPTM_KYSE-520_SHP099_60min_R1 4 SLVESVSSSPNKESNEEEQVWHFLGK 26 1 Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2;Q9H2U2-4 Q9H2U2-6 PPA2 Inorganic pyrophosphatase 2, mitochondrial 1 S(0.01)LVES(0.026)VS(0.311)S(0.311)S(0.311)PNKES(0.03)NEEEQVWHFLGK;S(0.009)LVES(0.023)VS(0.258)S(0.258)S(0.226)PNKES(0.226)NEEEQVWHFLGK;SLVES(0.002)VS(0.405)S(0.327)S(0.265)PNKES(0.001)NEEEQVWHFLGK;S(0.017)LVES(0.015)VS(0.321)S(0.271)S(0.271)PNKES(0.104)NEEEQVWHFLGK 117.38 2.8196e-05 876382000.0 583745.0 589913.0 513750.0 520021.0 486289.0 522204.0 476507.0 501232.0 659848.0 483899.0 True False 551363.5011831919 561572.6940025343 546867.1470290642 569443.6394899851 524557.1776940759 518944.7311342616 524676.9778201655 499493.343180428 540036.2366144479 479612.03132772556 1.1496031483130946 1.1708895051025188 1.1402281663267582 1.187300572743298 1.0937114655817268 1.082009410184415 1.0939612510713819 1.0414529047523358 1.125985591144259 1.0 18.87150832442984 -5.890147274232622 4.95120992079703 1.0743307559447257 1.1607776052501066 0.6347729677486709 0.03337755998989128 0.1363086352870897 5.378636741268713 0.009781357850652338 0.011183788423937928 1.2878127655800973e-06 5.890147274232622 0.08644684930538094 SLVESVSS(ph)SPNKESNEEEQVWHFLGK ddPTM_KYSE-520_SHP099_60min_R1 4 SLVESVSSSPNKESNEEEQVWHFLGK 26 1 Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2;Q9H2U2-4 Q9H2U2-6 PPA2 Inorganic pyrophosphatase 2, mitochondrial 1 SLVES(0.001)VS(0.076)S(0.442)S(0.377)PNKES(0.103)NEEEQVWHFLGK;SLVES(0.08)VS(0.105)S(0.676)S(0.139)PNKESNEEEQVWHFLGK;SLVESVS(0.009)S(0.553)S(0.437)PNKESNEEEQVWHFLGK;SLVESVS(0.002)S(0.499)S(0.499)PNKESNEEEQVWHFLGK 239.39 3.7070999999999995e-29 7884130000.0 2371790.0 2536480.0 2035000.0 2216050.0 2005500.0 2136420.0 1862570.0 2250560.0 2797120.0 2053490.0 True False 2240222.0806538514 2414623.6934658983 2166179.3561151233 2426662.72572027 2163321.4402659065 2123085.8103152383 2050856.752531454 2242753.3326446535 2289233.517657103 2035297.676191047 1.100685224996822 1.1863737288713168 1.0643059152747691 1.1922888499836752 1.0629017394224363 1.0431328228549261 1.007644619518028 1.1019289015461604 1.1247659467391933 1.0 20.956808383254344 -5.871489428062317 9.6735478273303 1.0582734723875777 1.1343173681164689 0.37921871747874436 0.04962122138677628 0.33197240159845187 27.220343548634258 0.015176585947000998 0.01722262178562896 1.3443444913634154e-06 5.871489428062317 0.07604389572889114 SLVESVSSS(ph)PNKESNEEEQVWHFLGK ddPTM_KYSE-520_SHP099_60min_R1 2 SLVESVSSSPNKESNEEEQVWHFLGK 26 1 Q9H2U2-6;Q9H2U2-3;Q9H2U2;Q9H2U2-2;Q9H2U2-4 Q9H2U2-6 PPA2 Inorganic pyrophosphatase 2, mitochondrial 1 SLVES(0.002)VS(0.017)S(0.12)S(0.861)PNKESNEEEQVWHFLGK;SLVES(0.009)VS(0.051)S(0.294)S(0.644)PNKES(0.001)NEEEQVWHFLGK 192.42 1.6198e-15 12259080000.0 1928340.0 1932060.0 1701840.0 1753790.0 1655240.0 1789710.0 1582110.0 1771560.0 2267200.0 1717420.0 True False 1821371.136149515 1839240.9375188164 1811543.329440278 1920469.6743038099 1785497.9709726975 1778539.7560307821 1742045.1187056263 1765414.871845212 1855533.6314609959 1702204.9949325398 1.0700069272336366 1.0805049585650568 1.0642333531115455 1.1282246733037697 1.0489324002033367 1.0448446346506388 1.0234050093212572 1.0371341155153744 1.090076481378515 1.0 20.698973359205695 -5.973631122548121 24.991892204765758 1.0411498156532117 1.0844253412454017 0.41315049542547644 0.02642184620847374 229.4796956018321 217495.29340703078 0.008004092622963418 0.009075570005740968 1.062597714461407e-06 5.973631122548121 0.043275525592189945 SLVGS(ph)WLK ddPTM_KYSE-520_SHP099_60min_R1 4 SLVGSWLK 8 0 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 SLVGS(1)WLK;SLVGS(1)WLK;SLVGS(1)WLK;SLVGS(1)WLK 121.36 0.0009324 5580550000.0 5551590.0 4464040.0 4665520.0 4464610.0 4643380.0 4428950.0 4103270.0 4614710.0 4934380.0 4430420.0 True False 5243632.235879702 4249580.817739356 4966266.884295937 4888925.192066059 5008787.58878181 4401307.280214415 4518068.57565608 4598702.648091408 4038420.977597259 4391169.925614607 1.1941310230999045 0.9677559488077809 1.130966682780065 1.1133536790612322 1.1406499118980824 1.002308577160878 1.028898597000596 1.0472613736185021 0.9196685726143984 1.0 22.06617393300706 -6.275022907035263 24.21733217451568 1.0044106961459007 1.1029248904823923 0.435895539270834 0.06208737467319256 559.413235798813 997343.6525367859 0.02125931279514833 0.018857033110606537 5.308564432581952e-07 6.275022907035263 0.09851419433649156 SLVQDSLSTNSSDLVAPS(ph)PDAFR ddPTM_KYSE-520_SHP099_60min_R1 2 SLVQDSLSTNSSDLVAPSPDAFR 23 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SLVQDSLSTNSSDLVAPS(1)PDAFR;SLVQDSLSTNSSDLVAPS(0.999)PDAFR 105.16 0.00063767 223135000.0 147778.0 175098.0 141939.0 137571.0 140137.0 179931.0 155621.0 204203.0 254430.0 190611.0 True False 139580.45975186056 166686.02925254367 151088.61505042968 150645.70647777055 151164.98462954062 178807.98388698447 171352.6893945988 203494.6674543387 208231.92565835436 188922.33483311385 0.7388245538843258 0.8822992231161402 0.7997392959593427 0.7973949009832253 0.8001435339187052 0.9464629158057781 0.9070006971169642 1.0771339854236792 1.1022091477024027 1.0 17.52743374497303 -6.807858663308115 1.2425249633275326 1.0686314469275826 0.8066687869929461 0.806349536995876 0.05226368613221353 0.18975378107913038 0.5827307415354332 0.03415802781860918 0.018786715256368672 1.5564720870924314e-07 6.807858663308115 -0.2619626599346365 SLY(ph)YYIQQDTK ddPTM_KYSE-520_SHP099_60min_R1 1 SLYYYIQQDTK 11 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 1 SLY(0.815)Y(0.183)Y(0.002)IQQDTK 208.33 3.629e-11 86219000.0 382450.0 329360.0 301800.0 286360.0 334940.0 293440.0 230620.0 294590.0 393890.0 381770.0 True False 361234.73610482685 313537.05122056114 321254.5108970733 313575.5683027269 361297.8724520887 291608.5321139589 253933.3202343024 293568.13604782324 322369.505158862 378387.8148125656 0.9546679939568469 0.8286129704675393 0.8490086052485775 0.8287147630746423 0.9548348501419307 0.7706604724002732 0.6710927527095139 0.7758392964985995 0.8519553023094777 1.0 18.5295061048886 -6.29230300931722 24.631244911137784 0.7909734597949417 0.8752141289669577 0.10146875653263432 0.08949686938575417 1031.1136823835545 822894.3229764325 0.030850672090420844 0.02721098620126284 5.101489424446844e-07 6.29230300931722 0.084240669172016 SLYAS(ph)SPGGVYATR ddPTM_KYSE-520_SHP099_60min_R1 3 SLYASSPGGVYATR 14 0 B0YJC4;P08670;A0A1B0GTT5;A0A1B0GVG8 B0YJC4 VIM Vimentin 1 SLY(0.001)AS(0.499)S(0.499)PGGVYATR;S(0.002)LY(0.001)AS(0.498)S(0.498)PGGVYATR;SLYAS(0.604)S(0.394)PGGVYAT(0.002)R 108.35 0.0012109999999999998 499980000.0 1878930.0 1670220.0 1813110.0 1533300.0 1494560.0 1678000.0 1523860.0 1758870.0 2094000.0 1611420.0 True False 1774702.0073459055 1589980.1241486704 1929985.9716785722 1679024.3709965444 1612173.369116837 1667526.9795775027 1677906.640240412 1752768.890493345 1713782.3854443047 1597144.072465788 1.1111721465465483 0.9955145259337452 1.2083981682998193 1.0512666953109266 1.0094101070217452 1.0440679762866054 1.0505668644219033 1.0974394362477844 1.0730292996037871 1.0 20.6070630281327 -5.470187756998977 24.999960622996632 1.048922030570379 1.100036149200341 0.19234604275820466 0.05450415666739364 623.9807857257018 296055.08955998765 0.015197121533102665 0.02254076832521605 3.3869769650380154e-06 5.470187756998977 0.05111411862996196 SLYASS(ph)PGGVYATR ddPTM_KYSE-520_SHP099_60min_R1 4 SLYASSPGGVYATR 14 0 B0YJC4;P08670;A0A1B0GTT5;A0A1B0GVG8 B0YJC4 VIM Vimentin 1 SLYAS(0.053)S(0.947)PGGVYATR;SLYAS(0.033)S(0.967)PGGVYATR;SLYAS(0.097)S(0.903)PGGVYATR;SLYAS(0.006)S(0.994)PGGVYATR 174.39 1.6475e-08 3875520000.0 5843250.0 5154190.0 4907770.0 4405120.0 4062270.0 4973780.0 4598150.0 5280610.0 6059520.0 5462580.0 True False 5519113.274269906 4906574.975803086 5224132.706909643 4823781.280352383 4381947.537845423 4942736.79408999 5062975.8756194515 5262292.796413642 4959263.916068511 5414185.7910229275 1.0193801039153394 0.9062442932672363 0.964897199422228 0.8909522994852755 0.8093456166781305 0.9129233803327121 0.9351315361238979 0.9719453671388348 0.9159759394092633 1.0 22.368312964669514 -9.139080528021873 8.976509707536076 0.9999999617303585 0.9227007911693472 0.15109538907082565 0.052892322779679125 0.0 0.0 0.053610172637931414 0.013002376729046415 7.25971333445697e-10 9.139080528021873 -0.07729917056101132 SLYGDVDS(ph)PLPTGEAGGPPSTR ddPTM_KYSE-520_SHP099_60min_R1 1 SLYGDVDSPLPTGEAGGPPSTR 22 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;J3QL92 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 SLYGDVDS(0.976)PLPT(0.024)GEAGGPPSTR 180.15 2.8413000000000003e-10 823700000.0 363950.0 361170.0 277180.0 297840.0 309900.0 312200.0 294270.0 340880.0 392300.0 348290.0 True False 343760.9679836625 343818.8510727777 295047.4663036808 326146.6240511386 334287.3669101993 310251.44399528974 324017.6833984391 339697.56684199016 321068.209078224 345204.4215655195 0.9958185541908449 0.995986231907291 0.8547036129074641 0.9447927189693781 0.9683751019010394 0.8987470165888484 0.9386255307188782 0.9840475544937825 0.9300813924171756 1.0 18.39709141789283 -9.193494423120939 0.7193493844790803 1.0027224483241082 0.9433406522052566 0.12532440098117104 0.042303475654368594 17.150929128269546 8.189123282968522 0.1828920039338934 0.01568122481033898 6.40480006073107e-10 9.193494423120939 -0.059381796118851526 SLYSTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SLYSTSPR 8 0 F5H4N6;Q9Y3R0-3;Q9Y3R0-2;Q9Y3R0;H0YFK8;F5H4P8;H0YGM4 F5H4N6 GRIP1 Glutamate receptor-interacting protein 1 1 S(0.001)LYS(0.011)T(0.063)S(0.926)PR 65.465 0.054147 0.0 469780.0 448480.0 426440.0 428750.0 452080.0 410170.0 378930.0 399440.0 541350.0 397160.0 True False 443720.3669167876 426934.34761779534 453929.0047281247 469498.27109161264 487656.12401666015 407609.9768851636 417235.94240041677 398054.4358699973 443054.4863229584 393641.47138580447 1.127219561888847 1.0845766481737409 1.1531534091925821 1.1927053047504277 1.2388332009325125 1.035485350286349 1.0599389869455282 1.0112106188117251 1.1255279703208014 1.0 18.58652269564968 -6.287974344668085 24.880231269487577 1.0479773845942832 1.1566611024062632 0.5689353531219843 0.04908520027897253 587.7005279878524 551049.2918254471 0.01820452785863686 0.016044592121032514 5.152590818838065e-07 6.287974344668085 0.10868371781197994 SLYYYIQQDTK ddPTM_KYSE-520_SHP099_60min_R1 2 SLYYYIQQDTK 11 0 P07355;P07355-2;A6NMY6 P07355 ANXA2;ANXA2P2 Annexin A2;Putative annexin A2-like protein 0 ; 135.99 0.00084686 2240000000.0 2612200.0 3273800.0 1741110.0 2698100.0 2551100.0 3030400.0 2333400.0 2513600.0 2639800.0 2410600.0 False True 2467296.058708398 3116521.7339260182 1853344.7364744956 2954526.6127866586 2751857.056226559 3011486.1495301966 2569282.8437894373 2504880.90827865 2160478.863942635 2389243.959418419 1.0326681161973006 1.3043966153563618 0.7757034308566925 1.236594781851343 1.1517689708406362 1.2604347654239718 1.0753539142209836 1.048398970898049 0.9042520984205107 1.0 21.188122740436842 -7.437816724379187 2.566931112778298 0.9555590327396137 1.1254880749493665 0.1780454083484344 0.14211541420278206 0.5027530800284774 6.225643811665857 0.10406530852141345 0.038286344571032936 3.649079083885141e-08 7.437816724379187 0.1699290422097528 SMDAMS(ph)SPTKTETVK ddPTM_KYSE-520_SHP099_60min_R1 3 SMDAMSSPTKTETVK 15 1 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 S(0.002)MDAMS(0.489)S(0.489)PT(0.013)KT(0.003)ET(0.004)VK;SMDAMS(0.687)S(0.312)PT(0.001)KTETVK;S(0.003)MDAMS(0.495)S(0.495)PT(0.006)KTETVK 171.52 1.869e-08 7867100000.0 8136330.0 7968210.0 6543290.0 5440250.0 6466260.0 7280180.0 6445200.0 6950450.0 9473700.0 7140940.0 True False 7684991.555528254 7585405.231072959 6965080.943034157 5957289.724329193 6975117.874013376 7234741.696174355 7096743.715090291 6926340.511197224 7753514.892542356 7077676.827167247 1.0858070724605375 1.0717365904525091 0.9840914064201268 0.8417012912291341 0.9855095173658954 1.0221915852959298 1.0026939472356036 0.9786177979490208 1.0954886867370015 1.0 22.754844457890446 -9.32588142894416 13.804619711366106 0.9999818414331858 1.0026487006289861 0.0 0.06914428299721549 0.0 0.0 0.0715399223660335 0.017350979786096676 4.721919414848199e-10 9.32588142894416 0.002666859195800342 SMDAMSS(ph)PTKTETVK ddPTM_KYSE-520_SHP099_60min_R1 5 SMDAMSSPTKTETVK 15 1 H3BQK9;H3BPE1;Q9UPN3;Q9UPN3-2;Q9UPN3-3;Q9UPN3-4;A0A590UJG2;H0Y390;Q9UPN3-5 H3BQK9 MACF1 Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 1 SMDAMS(0.017)S(0.981)PT(0.002)KTETVK;SMDAMS(0.019)S(0.928)PT(0.054)KTETVK;SMDAMS(0.004)S(0.619)PT(0.376)KT(0.001)ETVK;SMDAMS(0.192)S(0.808)PTKTETVK;SMDAMS(0.195)S(0.799)PT(0.006)KTETVK 332.39 5.5463e-54 17701680000.0 14657700.0 14072600.0 10634410.0 9859310.0 10443900.0 13698100.0 10756730.0 12930300.0 15539100.0 12798100.0 True False 13844608.161599461 13396531.172596762 11319921.084257612 10796335.858090369 11265775.512337636 13612605.076847801 11844125.243968097 12885447.807254702 12717591.148833623 12684718.790771129 1.0914398963004381 1.0561157400149477 0.8924061519198607 0.8511293026019097 0.8881375849288944 1.073149929563418 0.9337317948731657 1.0158244750864809 1.002591492850942 1.0 23.59658820066842 -7.28529462252878 23.88284405363943 1.0069059984260647 0.9661257618654362 0.04298867127943007 0.07822540587662576 1813.936524222669 1816019.8628122874 0.046928902269328915 0.022571923041941413 5.18448207737892e-08 7.28529462252878 -0.04078023656062846 SMEAEMIQLQEELAAAER ddPTM_KYSE-520_SHP099_60min_R1 1 SMEAEMIQLQEELAAAER 18 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 109.84 0.00054748 0.0 16264.0 23677.0 17349.0 14661.0 20675.0 16128.0 17588.0 16957.0 19794.0 20813.0 False True 15361.803498519794 22539.52138009844 18467.34429938147 16054.377032009617 22302.004875341634 16027.339169622155 19365.9666823385 16898.18012479356 16199.908566133985 20628.61301226898 0.7446842640066629 1.0926338754182328 0.8952295672228626 0.7782577055695015 1.0811199406415446 0.776947008511421 0.938791506284038 0.8191622051731386 0.7853125441104063 1.0 14.332359202829613 SMFGS(ph)LDPPNMPQALPK ddPTM_KYSE-520_SHP099_60min_R1 2 SMFGSLDPPNMPQALPK 17 0 Q99570 Q99570 PIK3R4 Phosphoinositide 3-kinase regulatory subunit 4 1 S(0.002)MFGS(0.998)LDPPNMPQALPK;SMFGS(1)LDPPNMPQALPK 211.78 6.1527e-18 442800000.0 1094060.0 1120780.0 854110.0 804740.0 913130.0 1135880.0 891500.0 1065730.0 1278950.0 1004210.0 True False 1033370.3108454616 1066936.0464749215 909167.297224319 881222.247646097 984988.1360010006 1128790.5515867067 981621.520201546 1062033.2313732523 1046724.9197058239 995313.4806635584 1.0382360240479527 1.071959806837554 0.9134481898287892 0.8853715585752956 0.9896260375618805 1.134105559219555 0.9862435697616754 1.0670339064082737 1.0516535142355254 1.0 19.924791458153965 -6.024103159166997 24.506193314819374 1.0496732706144491 0.9742157680896195 0.22934616485160364 0.06258064203773622 908.3509482720374 923538.2166664926 0.02187756959622917 0.022002162105492835 9.460124257332074e-07 6.024103159166997 -0.07545750252482963 SMGS(ph)PRPK ddPTM_KYSE-520_SHP099_60min_R1 2 SMGSPRPK 8 1 P35612;P35612-4;P35612-3;P35612-2;P35612-8;P35612-9 P35612 ADD2 Beta-adducin 1 S(0.207)MGS(0.793)PRPK;S(0.207)MGS(0.793)PRPK 60.434 0.022515 2368700000.0 3808200.0 3611400.0 3606000.0 3503000.0 3177700.0 3167500.0 3404700.0 3543800.0 4189000.0 3362500.0 True False 3596951.554541512 3437902.923178082 3838448.529803994 3835924.0667846454 3427766.9113602447 3147730.4575755354 3748880.3026698884 3531507.3849291382 3428383.1960965535 3332710.8659854135 1.0792870126397742 1.031563511334358 1.1517496369037836 1.1509921565459422 1.0285221398426727 0.9444955125577078 1.1248741500296402 1.0596500947540028 1.0287070597955552 1.0 21.6682647291657 -5.788241575678194 24.82582545625473 1.034388301540078 1.101720733882605 0.304565246031555 0.05339633148984641 292.7326902715283 271145.18730304524 0.017582184609112296 0.019942032428850863 1.6283899910906958e-06 5.788241575678194 0.06733243234252684 SMGTGDTPGLEVPS(ph)SPLR ddPTM_KYSE-520_SHP099_60min_R1 3 SMGTGDTPGLEVPSSPLR 18 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.5)S(0.5)PLR;SMGTGDTPGLEVPS(0.666)S(0.334)PLR;SMGTGDTPGLEVPS(0.5)S(0.5)PLR 153.92 5.3293e-07 1418540000.0 2290060.0 2799950.0 1927570.0 1745900.0 1911450.0 2903100.0 1963570.0 2516240.0 2837090.0 2931820.0 True False 2163025.806678572 2665436.199189367 2051824.2464210435 1911829.8110760269 2061870.2403372081 2884980.676049735 2162066.8181964634 2507511.750734828 2321945.973218805 2905846.3557214434 0.7443703286031278 0.9172667350224065 0.7061021111391936 0.6579252916492796 0.7095592773780021 0.9928194139959859 0.7440403082356639 0.8629195916699733 0.7990601322217288 1.0 21.470526992976716 -6.22357998371034 24.99840226279788 0.8627174997402458 0.7492758459058684 0.3117932637048709 0.09692311287494529 838.855734510824 553893.1631705108 0.03243873838786288 0.03243817953585906 5.976129725907583e-07 6.22357998371034 -0.11344165383437743 SMGTGDTPGLEVPS(ph)SPLRK ddPTM_KYSE-520_SHP099_60min_R1 2 SMGTGDTPGLEVPSSPLRK 19 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDT(0.036)PGLEVPS(0.482)S(0.482)PLRK;SMGTGDTPGLEVPS(0.585)S(0.415)PLRK 95.95700000000001 0.00065139 1386900000.0 1037160.0 983170.0 831574.0 728702.0 813377.0 1056979.0 851589.0 944621.0 1120713.0 1036974.0 True False 979626.6672727979 935937.0374317429 885178.5906054446 797957.6189877545 877385.142417933 1050382.001994547 937675.9268277222 941344.3302271998 917219.7700756649 1027787.2171135651 0.9531415169999671 0.9106330783722199 0.8612469350332823 0.7763840663719642 0.8536641902221542 1.0219839131142698 0.9123249552189303 0.9158941798000454 0.8924218503627458 1.0 19.9711101834766 -6.207652706959809 24.99898264144698 0.9410061097950757 0.8674151589499677 0.31721220712673426 0.056197809379486346 448.34108793081776 208379.76719562456 0.019810149272313594 0.019810129273935495 6.19936622733516e-07 6.207652706959809 -0.07359095084510803 SMGTGDTPGLEVPSS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 5 SMGTGDTPGLEVPSSPLR 18 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPSS(1)PLR;SMGTGDTPGLEVPSS(1)PLR;SMGTGDTPGLEVPSS(1)PLR;SMGTGDTPGLEVPS(0.143)S(0.857)PLR;SMGTGDTPGLEVPS(0.199)S(0.801)PLR 415.2 8.491e-102 5063840000.0 3616820.0 4173860.0 2704920.0 2579650.0 2773770.0 4230690.0 2868970.0 3910840.0 4187440.0 4094320.0 True False 3416187.7846480813 3973341.500508416 2879283.471225022 2824819.160399947 2992049.9184075645 4204284.6944152275 3158993.4860489387 3897274.2088369173 3427106.4527721554 4058047.510132755 0.84183040640062 0.97912641253883 0.7095243375134435 0.6961030282042054 0.7373126881675376 1.0360363411018045 0.7784515775532641 0.9603816118726076 0.8445210274682173 1.0 21.952354325062334 -6.238823987864815 24.854386493031374 0.9123128280530465 0.7931358012327387 0.2885139212123864 0.1021312216286566 1145.3494046357969 1258743.2550716787 0.03494402585191575 0.03492093562505843 5.770002643624911e-07 6.238823987864815 -0.11917702682030773 SMGTGDTPGLEVPSS(ph)PLRK ddPTM_KYSE-520_SHP099_60min_R1 1 SMGTGDTPGLEVPSSPLRK 19 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SMGTGDTPGLEVPS(0.193)S(0.807)PLRK 116.04 4.3287e-05 2326200000.0 2799700.0 2877300.0 2412700.0 2031200.0 2115200.0 2698100.0 2357800.0 2543600.0 3075000.0 2856200.0 True False 2644395.0599364173 2739070.189084648 2568226.502456491 2224244.637297453 2281654.206158289 2681260.1570906253 2596149.433910495 2534776.8452807055 2516657.5144418515 2830896.290089972 0.9341193703187102 0.9675628876526574 0.9072132071552742 0.7857033283359037 0.805982972299481 0.9471417820839382 0.9170768434713601 0.8953972825334923 0.8889967192552528 1.0 21.43282746639067 SMMS(ph)PMAER ddPTM_KYSE-520_SHP099_60min_R1 2 SMMSPMAER 9 0 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;H7C1M2 P18583-10 SON Protein SON 1 SMMS(1)PMAER;SMMS(1)PMAER 115.15 0.00089566 367810000.0 268520.0 279440.0 236170.0 247490.0 234610.0 255580.0 240080.0 266600.0 293730.0 232700.0 True False 253624.660318651 266015.28295200877 251393.89608536026 271011.37518941844 253072.4722517005 253984.83041741268 264349.629355005 265675.22682490747 240396.03633073295 230638.4590378604 1.0996633491945822 1.1533864909682783 1.0899912232074564 1.175048499369876 1.0972691775145682 1.1012249712252884 1.1461645662123106 1.151912078901358 1.0423068092527916 1.0 17.815273577352336 -7.918281296650268 4.342970836216347 1.0010955811228919 1.1266559933617 0.7050832060880065 0.027914491886644435 0.09722936414139755 3.1943377952508842 0.025722281514829092 0.00675381477702062 1.2070317759443216e-08 7.918281296650268 0.1255604122388081 SMS(ph)AAFCSLLAPER ddPTM_KYSE-520_SHP099_60min_R1 8 SMSAAFCSLLAPER 14 0 Q13671;Q13671-2;E9PNR2 Q13671 RIN1 Ras and Rab interactor 1 1 S(0.002)MS(0.998)AAFCSLLAPER;S(0.002)MS(0.998)AAFCSLLAPER;SMS(1)AAFCSLLAPER;SMS(1)AAFCSLLAPER;S(0.001)MS(0.999)AAFCSLLAPER;S(0.031)MS(0.969)AAFCSLLAPER;S(0.002)MS(0.998)AAFCSLLAPER;SMS(1)AAFCSLLAPER 242.91 1.6840999999999998e-18 2534885000.0 1543959.0 1895597.0 1590807.0 1646727.0 1485844.0 1601496.0 1423171.0 1758642.0 2020311.0 1813486.0 True False 1458312.51646404 1804529.6747708942 1693352.9646011936 1803231.4389734752 1602771.4695040914 1591500.4694192223 1567039.0134904687 1752541.6813721266 1653473.4502957824 1797419.924910757 0.8113365698538398 1.0039555307925554 0.9421020325482758 1.0032332533884685 0.8917067443678582 0.8854360894537437 0.8718268846208952 0.975031853760685 0.9199149444044793 1.0 20.77749606933094 -8.593006624833205 1.1803343507157034 0.9998872250811359 0.9244768875721087 0.1368620474744724 0.05796268405410319 6.311646448867099 10.547772899738598 0.056129546043140154 0.016938516175416737 2.5526623634343562e-09 8.593006624833205 -0.07541033750902726 SMS(ph)AEDLLER ddPTM_KYSE-520_SHP099_60min_R1 2 SMSAEDLLER 10 0 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 SMS(1)AEDLLER;SMS(1)AEDLLER 190.66 3.1668e-06 751780000.0 1073980.0 956660.0 857560.0 803040.0 867730.0 919300.0 946420.0 1064100.0 1260750.0 1072010.0 True False 1014404.1884739491 910700.6176240648 912839.6897445134 879360.6801572212 936015.4142916668 913562.3077029793 1042093.3697690935 1060408.8854628082 1031829.5809211587 1062512.8254111595 0.9547218294342998 0.8571196467879358 0.8591328668350641 0.8276235911005929 0.8809450501733547 0.8598129696452925 0.980781920788425 0.9980198451274814 0.9711220008303171 1.0 20.01904882520548 -6.775065908574428 9.648513333780999 0.9874704885008767 0.8701088676271596 0.7566743937259489 0.031711843375881434 0.10591060027305131 65.90951685744933 0.013088145555192948 0.009117421706648424 1.6785492619866452e-07 6.775065908574428 -0.11736162087371715 SMS(ph)APVIFDR ddPTM_KYSE-520_SHP099_60min_R1 4 SMSAPVIFDR 10 0 O60749;D6RC15 O60749 SNX2 Sorting nexin-2 1 S(0.028)MS(0.972)APVIFDR;S(0.003)MS(0.997)APVIFDR;S(0.064)MS(0.936)APVIFDR;SMS(1)APVIFDR 178.53 1.9253e-05 663560000.0 1145390.0 823830.0 693760.0 694050.0 765390.0 724540.0 699330.0 787620.0 816060.0 780920.0 True False 1081852.9334216428 784251.9702059603 738480.8796552474 760012.3033262581 825621.8385266133 720017.8771055336 770025.1012030818 784887.9300518901 667884.0751985098 774001.6563465669 1.3977398168993485 1.0132432712195694 0.9541076218635188 0.9819259391687336 1.0666925991136806 0.9302536644484111 0.9948623428504596 1.0140649230089616 0.8628974753762777 1.0 19.561977128145543 -4.262028941620565 4.186018268095101 0.9787502861175448 1.4312236634305635 0.858512785294825 0.05109002926052263 0.07236922374052174 2.8676838963150395 0.012394171289956813 0.098411475522361 5.46979510667196e-05 4.262028941620565 0.45247337731301873 SMS(ph)DVSAEDVQNLR ddPTM_KYSE-520_SHP099_60min_R1 2 SMSDVSAEDVQNLR 14 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;E9PJ10;E9PK58;E9PLU6;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.005)MS(0.995)DVSAEDVQNLR;SMS(1)DVSAEDVQNLR 205.3 1.3498e-13 208700000.0 295980.0 345560.0 291680.0 280680.0 295920.0 259510.0 224640.0 269160.0 321450.0 261180.0 True False 279561.399378498 328958.778903865 310482.1595045007 307355.7428104812 319207.22044551856 257890.3018296531 247348.80347512627 268226.346782416 263082.7830950674 258866.14839496507 1.0799457600456788 1.2707678502712378 1.1993926646244315 1.1873153161051138 1.233097577356805 0.9962303044590323 0.9555084935158605 1.0361584488566253 1.0162888609663587 1.0 17.981846792568682 -6.266886515586288 24.992546375073736 1.0002640690572653 1.198279631960997 0.7943258342894227 0.04914854829587982 189.00169693464147 867174.3318759393 0.016511561985989166 0.014977089486464062 5.408956445796596e-07 6.266886515586288 0.19801556290373168 SMS(ph)ENAVR ddPTM_KYSE-520_SHP099_60min_R1 3 SMSENAVR 8 0 Q9GZY8-5;C9JHF5;A0A0A0MS29;Q9GZY8-4;Q9GZY8-3;Q9GZY8-2;Q9GZY8;H7C433 Q9GZY8-5 MFF Mitochondrial fission factor 1 S(0.067)MS(0.933)ENAVR;S(0.004)MS(0.996)ENAVR;S(0.029)MS(0.971)ENAVR 93.44200000000001 0.0038379 2271990000.0 1929850.0 2320310.0 2187360.0 2185170.0 2464120.0 2512420.0 2379350.0 2454790.0 2931430.0 1941490.0 True False 1822797.3734394044 2208838.8247436867 2328360.7254997427 2392847.899804682 2658032.2250750586 2496739.0548451236 2619877.9182182257 2446274.9064422953 2399156.2073366772 1924289.9090563636 0.9472571491752356 1.1478721653884578 1.2099843763362703 1.243496569068478 1.3813054948557666 1.2974859157628065 1.3614777616866294 1.2712610999669502 1.2467748212186902 1.0 20.8758947378968 -4.175558258997069 1.1883596402590295 1.2788428315869664 0.7480366781575658 0.46235106250413704 0.09923525903703923 1.4401773152706356 1.5171478449993465 0.028542763498604653 0.9916567155117276 6.674853542688949e-05 4.175558258997069 -0.5308061534294006 SMS(ph)FQGIR ddPTM_KYSE-520_SHP099_60min_R1 6 SMSFQGIR 8 0 P15924;P15924-3;P15924-2 P15924 DSP Desmoplakin 1 SMS(1)FQGIR;SMS(1)FQGIR;SMS(1)FQGIR;S(0.001)MS(0.999)FQGIR;SMS(1)FQGIR;S(0.002)MS(0.998)FQGIR 160.97 0.00021837 10289600000.0 12005210.0 8344230.0 7538600.0 6708670.0 7788890.0 7750050.0 7513610.0 7226280.0 8758190.0 8201820.0 True False 11339257.06950719 7943360.665855421 8024550.218186468 7346259.979764816 8401831.33027811 7701679.063214914 8273159.024567058 7201213.721306427 7167923.472003085 8129158.25571941 1.3948869874109362 0.9771443015353689 0.9871317503925645 0.903692577838084 1.0335425964141929 0.9474140890043892 1.0177141057312218 0.885849862283083 0.8817546966760018 1.0 22.954674543620857 -4.258884741711485 4.765327548782513 0.9570701254609056 1.4205658403164214 0.8681986659283132 0.050959652888909676 0.06102723080608042 3.937438745718268 0.012853922651650654 0.09437496740770238 5.5095389577013356e-05 4.258884741711485 0.4634957148555158 SMS(ph)PFR ddPTM_KYSE-520_SHP099_60min_R1 5 SMSPFR 6 0 I3L1H7;I3L4K3;I3L3P0;I3L136;A6NHV6;B4DZM6;Q99640-4;Q99640-2;Q99640-3;Q99640 I3L1H7 PKMYT1 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase 1 S(0.01)MS(0.99)PFR;S(0.022)MS(0.978)PFR;S(0.002)MS(0.998)PFR;S(0.008)MS(0.992)PFR;S(0.006)MS(0.994)PFR 99.79899999999999 0.012255 1235430000.0 1028730.0 1119370.0 907240.0 1101240.0 1076650.0 1123280.0 1049480.0 1164300.0 1394960.0 1020970.0 True False 971664.2961775877 1065593.784991376 965722.1420353245 1205901.5185001206 1161376.229699473 1116269.1928604408 1155571.6803377646 1160261.315049664 1141670.4280799367 1011925.0001026411 0.9602137471443342 1.0530363266875424 0.954341618141038 1.191690607878849 1.147690026021368 1.103114551717979 1.141953880199178 1.146588250050129 1.1282164468356206 1.0 19.948670936441733 -5.256075042635856 24.99924875118694 1.1298795004084246 0.9955811367923403 0.5655787649218098 0.05329471885773773 302.28016675311625 1408703.0533282186 0.013633123612480414 0.022736404137937413 5.545298863206804e-06 5.256075042635856 -0.13429836361608427 SMS(ph)PTSTPK ddPTM_KYSE-520_SHP099_60min_R1 2 SMSPTSTPK 9 0 E9PQ01;E9PKN0;O94913 E9PQ01 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 SMS(0.923)PT(0.071)S(0.006)TPK;SMS(0.934)PT(0.066)STPK 151.07 0.00026225 1358380000.0 5163500.0 4967800.0 3825900.0 3792200.0 3939800.0 4504600.0 4074100.0 4558600.0 5428600.0 4872600.0 True False 4877070.361817936 4729139.431180181 4072523.635656441 4152609.547833491 4249839.845604406 4476485.120503476 4485949.787384317 4542787.280585242 4442903.0838696025 4829432.554825432 1.009864058862341 0.9792329383407496 0.8432716658579881 0.8598545482707532 0.87998740998217 0.9269174110384251 0.9288771996416192 0.9406461792382251 0.9199637914873415 1.0 22.203422255604263 -8.716433762412334 0.7315545638896387 1.0014008015806775 0.9145519594892839 0.1921128744468552 0.048284133172134765 4.8979363865414305 3.5905147008096683 0.07303817225159952 0.01933498894196086 1.921171952101114e-09 8.716433762412334 -0.08684884209139354 SMSLIPTSPQVPGEWPS(ph)PEELGAR ddPTM_KYSE-520_SHP099_60min_R1 1 SMSLIPTSPQVPGEWPSPEELGAR 24 0 M0QZ22;Q5PRF9;A0A087WZT0;M0R0X3 M0QZ22 SAMD4B Protein Smaug homolog 2 1 S(0.001)MS(0.001)LIPT(0.008)S(0.002)PQVPGEWPS(0.988)PEELGAR 52.06100000000001 0.048404 34347000.0 19599.0 21154.0 19889.0 15971.0 17841.0 21726.0 15294.0 21857.0 27406.0 23816.0 True False 18511.804400362118 20137.730087198663 21171.076763525165 17488.879038143765 19244.985198595892 21590.399975149503 16840.066775056002 21781.18316846216 22429.761249038496 23605.008768567626 0.7842320493018581 0.8531125865970453 0.8968891717471641 0.7408969515585148 0.8152924401461129 0.914653334249095 0.7134107400748012 0.9227356525054942 0.9502119431070033 1.0 14.5268053984103 -7.47897736295571 8.978440444195472 0.9625291230851594 0.8217750348169837 0.5401866851136079 0.0604514882694973 0.31080273781927753 61.816723514943625 0.032878550472166326 0.015522863062300347 3.319117575774949e-08 7.47897736295571 -0.1407540882681757 SMSQVDVDS(ph)GIENMEVDENDRR ddPTM_KYSE-520_SHP099_60min_R1 4 SMSQVDVDSGIENMEVDENDRR 22 1 O95155-2;O95155;O95155-4 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 SMSQVDVDS(1)GIENMEVDENDRR;S(0.001)MS(0.001)QVDVDS(0.999)GIENMEVDENDRR;SMSQVDVDS(1)GIENMEVDENDRR;SMSQVDVDS(1)GIENMEVDENDRR 138.71 7.985200000000001e-07 1069570000.0 472831.0 417117.0 401668.0 545873.0 471453.0 417411.0 419499.0 455926.0 550612.0 371872.0 True False 446602.1218647695 397078.0732146186 427560.16197152325 597752.6057972976 508553.6688993682 414805.7831182514 461906.0528357011 454344.49911992886 450634.74059897754 368577.5033920383 1.2116912121729257 1.0773258529353746 1.1600278314239596 1.6217826652363443 1.3797740345493739 1.1254234979095898 1.253212821142786 1.2326973158659233 1.2226322454619778 1.0 18.491608491321845 -8.763992535046219 0.7519940333531959 0.9949115749225442 1.2666090502462508 0.2233166109020226 0.14451096993096585 5.26614606229102 3.8587807019145672 0.22679896361050864 0.056444425610707574 1.7218981719077607e-09 8.763992535046219 0.2716974753237066 SMSSIPPYPASSLAS(ph)SSPPGSGR ddPTM_KYSE-520_SHP099_60min_R1 1 SMSSIPPYPASSLASSSPPGSGR 23 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 SMSSIPPYPAS(0.009)S(0.009)LAS(0.327)S(0.327)S(0.327)PPGS(0.001)GR 99.021 3.7904e-05 0.0 29442.0 38859.0 33364.0 31521.0 31897.0 28027.0 30874.0 41558.0 36708.0 36432.0 True False 27808.79356882808 36992.155311451876 35514.69682428745 34516.746362865786 34407.1124308959 27852.073096912234 33995.045221203036 41413.844997710126 30042.752533376086 36109.2408236671 0.7701295550528813 1.0244512060526645 0.9835348518601373 0.9558978692302623 0.9528616954013728 0.7713281271385005 0.9414500124001954 1.1469043395275766 0.8319962383059891 1.0 15.140080468308886 -7.0158289270881 24.926979580038356 1.0025056067707248 0.9168389040818129 0.10660366758523232 0.10558396533569618 1532.6274965755424 2413534.2761037657 0.04732906385633881 0.02837907617362706 9.642087602398138e-08 7.0158289270881 -0.08566670268891186 SMST(ph)EGNKR ddPTM_KYSE-520_SHP099_60min_R1 1 SMSTEGNKR 9 1 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10;F5GZI3;B1AP52 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 SMS(0.275)T(0.725)EGNKR 102.95 0.0036229 266190000.0 312670.0 295970.0 274150.0 292830.0 305580.0 324690.0 304710.0 338310.0 369200.0 282760.0 True False 295325.57180780807 281751.15693997295 291822.1476555091 320660.4751574498 329627.4074876371 322663.48927236005 335513.0604830203 337136.4815721477 302162.58677461185 280254.96638395137 1.0537746239372967 1.0053386763322216 1.0412737780200856 1.1441741043694569 1.1761697276616505 1.1513212180879204 1.1971707934815505 1.2029634511820506 1.0781703199530348 1.0 18.096380413619208 -5.245935618813088 4.555684468208073 1.149588955921286 1.0286371988158982 0.3750449169946686 0.05873456744677302 0.17188182394332785 9.534098080919575 0.01562724839086135 0.02637397327934403 5.676287462515029e-06 5.245935618813088 -0.12095175710538775 SNAKPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SNAKPLSPK 9 1 A0A0J9YWL0;A0A494C1M5 A0A0J9YWL0 1 SNAKPLS(1)PK;SNAKPLS(1)PK 89.189 0.0067017 1062570000.0 502310.0 497500.0 451770.0 492110.0 519250.0 646180.0 651280.0 762910.0 853220.0 666580.0 True False 474445.86296984064 473599.3532372752 480891.8170575571 538879.9864417331 560112.02087164 642146.9509316989 717117.7382802713 760263.6432745324 698296.7559258774 660674.6197913926 0.7181233375056038 0.7168420566644649 0.7278799618629187 0.815651109182738 0.8477880095477178 0.9719564392142931 1.0854325515133312 1.150738382404617 1.0569450301365655 1.0 19.333580398228136 -6.162637409451235 1.1942868401868176 1.091360407991359 0.7233698686034976 0.9289772926873143 0.04148536924626933 0.10736901678829289 0.3170581300210176 0.020267738803720275 0.019969962728407984 6.876423099539166e-07 6.162637409451235 -0.3679905393878614 SNALWDES(ph)DDS(ph)NSEIEAALRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SNALWDESDDSNSEIEAALRPR 22 1 A0A087WX12;A0A087WTH3;A0A087X251;A0A087X0T6;Q2M2Z5-5;Q2M2Z5-2;Q2M2Z5 A0A087WX12 KIZ Centrosomal protein kizuna 2 S(0.001)NALWDES(0.999)DDS(0.956)NS(0.044)EIEAALRPR 83.022 0.0033675 299830000.0 128300.0 119580.0 112700.0 129330.0 135360.0 119290.0 121080.0 103990.0 151720.0 123350.0 True False 121182.94324029084 113835.19730676056 119964.82232637571 141621.48431551768 146012.0619069527 118545.46686162111 133319.9480269244 103629.28296144858 124171.47254995695 122257.2149648477 0.9912130198216461 0.9311123056376779 0.9812494285991128 1.1583895834387994 1.194302209067458 0.9696398441245875 1.090487363590423 0.8476332704883294 1.0156576246699194 1.0 16.89956008224711 -9.48564354530694 7.573895981512069 0.9999784821665341 1.0209372927429554 0.003597392066206684 0.09849188483141726 0.0 0.0 0.10204581607319022 0.024749745783653868 3.2685599480783735e-10 9.48564354530694 0.02095881057642135 SNDRNS(ph)MDIQCEVDALLER ddPTM_KYSE-520_SHP099_60min_R1 20 SNDRNSMDIQCEVDALLER 19 1 Q02241-2;Q02241;A0A2U3TZL8;H7BYN4;A0A2R8Y531;H0YME6 Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 SNDRNS(1)MDIQCEVDALLER;S(0.01)NDRNS(0.99)MDIQCEVDALLER;S(0.003)NDRNS(0.997)MDIQCEVDALLER;S(0.045)NDRNS(0.955)MDIQCEVDALLER;S(0.039)NDRNS(0.961)MDIQCEVDALLER;S(0.012)NDRNS(0.988)MDIQCEVDALLER;S(0.007)NDRNS(0.993)MDIQCEVDALLER;SNDRNS(1)MDIQCEVDALLER;SNDRNS(1)MDIQCEVDALLER;S(0.001)NDRNS(0.999)MDIQCEVDALLER;S(0.022)NDRNS(0.978)MDIQCEVDALLER;SNDRNS(1)MDIQCEVDALLER;SNDRNS(1)MDIQCEVDALLER;SNDRNS(1)MDIQCEVDALLER;S(0.002)NDRNS(0.998)MDIQCEVDALLER;SNDRNS(1)MDIQCEVDALLER;S(0.044)NDRNS(0.956)MDIQCEVDALLER;S(0.014)NDRNS(0.986)MDIQCEVDALLER;S(0.012)NDRNS(0.988)MDIQCEVDALLER;S(0.001)NDRNS(0.999)MDIQCEVDALLER 319.92 9.3012e-54 6246010000.0 3089282.0 3265897.0 3131250.0 3055731.0 3065183.0 2973441.0 2734053.0 3184910.0 4074851.0 2922566.0 True False 2917913.3691290133 3108998.4059086647 3333095.3851771406 3346146.7555009727 3306395.4635944045 2954882.6517770607 3010437.759025904 3173862.290573585 3334960.777034438 2896674.3389619393 1.007332211937461 1.073299253592592 1.1506627929640163 1.1551684324652483 1.1414453530800752 1.0200948764009077 1.0392738039391523 1.0956917896787042 1.1513067700353103 1.0 21.46596606685133 -6.250236248903383 24.858026941729914 1.065879205195981 1.1090474754560127 0.129541759318768 0.05644759799028777 1655.8801830381922 3674145.2923380625 0.02008828845611697 0.019888968412324636 5.620355041432969e-07 6.250236248903383 0.04316827026003178 SNDS(ph)GEEAEKEFIFV ddPTM_KYSE-520_SHP099_60min_R1 9 SNDSGEEAEKEFIFV 15 1 Q5VZK9-2;Q5VZK9 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 SNDS(1)GEEAEKEFIFV;SNDS(1)GEEAEKEFIFV;S(0.045)NDS(0.955)GEEAEKEFIFV;S(0.002)NDS(0.998)GEEAEKEFIFV;S(0.001)NDS(0.999)GEEAEKEFIFV;S(0.001)NDS(0.999)GEEAEKEFIFV;S(0.004)NDS(0.996)GEEAEKEFIFV;SNDS(1)GEEAEKEFIFV;SNDS(1)GEEAEKEFIFV 177.67 2.1111e-08 2979781000.0 9041740.0 8226090.0 7660480.0 7203510.0 7927110.0 7576270.0 7212630.0 7570400.0 10404010.0 7601230.0 True False 8540176.657938179 7830896.28878718 8154286.798001371 7888129.424585748 8550928.457913876 7528983.688655344 7941753.0288853245 7544140.049344648 8514904.047749 7533889.0158674475 1.1335681531744555 1.0394228362395825 1.0823476136730017 1.047019594789918 1.134995277990477 0.9993488983973918 1.0541372473312067 1.0013606562899466 1.1302136293507103 1.0 22.84496334996321 -6.2728266193339435 24.9016483774385 1.0381674535979433 1.0822694727426845 0.22418722644494327 0.04640675602343064 1236.8575148435498 2704757.5789389946 0.015391550262920523 0.013680278099000636 5.335478579447156e-07 6.2728266193339435 0.04410201914474121 SNEDQSMGNWQIK ddPTM_KYSE-520_SHP099_60min_R1 1 SNEDQSMGNWQIK 13 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 231.17 9.7283e-12 0.0 83877.0 111950.0 78343.0 66633.0 111800.0 110880.0 90013.0 100910.0 89758.0 106900.0 False True 79224.1756053459 106571.75395962424 83393.11513323203 72965.78028605809 120598.02394501543 110187.95679115233 99112.39248222287 100559.96676257114 73460.20981504762 105952.94916694162 0.7477297822122787 1.005840373463391 0.7870768656173613 0.6886620982214636 1.138222436404283 1.0399706441161722 0.9354377887684785 0.9491002143236883 0.693328599086961 1.0 16.69306421966748 -5.749211993522142 24.99980759137235 0.9596344120842103 0.820060381248752 0.24414791483815468 0.13026574942823957 383.57275055948816 784239.7797191035 0.039998866891057 0.051247994327475975 1.7815089416450359e-06 5.749211993522142 -0.13957403083545827 SNEDS(ph)LILEK ddPTM_KYSE-520_SHP099_60min_R1 2 SNEDSLILEK 10 0 A0A0U1RRH6;O94880 A0A0U1RRH6 PHF14 PHD finger protein 14 1 SNEDS(1)LILEK;SNEDS(1)LILEK 190.37 3.2214999999999996e-06 223300000.0 758580.0 772330.0 585710.0 529550.0 626870.0 734320.0 594640.0 725330.0 856250.0 687250.0 True False 716500.0552082601 735226.107509036 623465.8037691346 579878.2727849865 676201.102597602 729736.8364978263 654752.0143271417 722813.9995232952 700776.5843059621 681161.4996724096 1.0518798486891079 1.0793712032500773 0.9152980667124866 0.8513080569936305 0.9927177371633699 1.071312510834476 0.9612287462547883 1.0611492280038104 1.0287965257035019 1.0 19.377637368347305 -6.006828831898706 24.951519724171455 1.0252149632776304 0.9707666736118693 0.11295368240553094 0.06624238195319142 748.6138298009716 2735334.350668505 0.022998256254008153 0.02515374089035793 9.843990096278614e-07 6.006828831898706 -0.054448289665761096 SNEEGSEEKGPEVR ddPTM_KYSE-520_SHP099_60min_R1 8 SNEEGSEEKGPEVR 14 1 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 ;;;;;;; 239.87 2.2478e-18 7996412000.0 7971941.0 7783934.0 5407588.0 5019058.0 7279216.0 7489855.0 5650692.0 7197689.0 7768485.0 7043580.0 False True 7529721.541059598 7409982.126716866 5756169.77492672 5496067.7632851945 7852048.886126467 7443108.036724355 6221919.092799447 7172721.89681224 6357923.951570337 6981179.361022325 1.0785744287132804 1.0614226828333124 0.8245268424221929 0.7872692390588213 1.12474533027563 1.0661677134784837 0.8912418333695852 1.0274369882056524 0.9107234784810458 1.0 22.735039347101917 -4.559511614336102 24.939808625423467 0.9559714414548394 1.0742869924017309 0.1782673771883 0.09983360175407491 256.44330801024734 174586.86393694094 0.02696679910324799 0.0713478611359015 2.757327712153138e-05 4.559511614336102 0.1183155509468915 SNETQNPHKPS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 6 SNETQNPHKPSPSR 14 1 A0A5S6SZ32;Q96LW4-2;Q96LW4 A0A5S6SZ32 PRIMPOL DNA-directed primase/polymerase protein 1 SNETQNPHKPS(1)PSR;SNETQNPHKPS(0.875)PS(0.125)R;SNETQNPHKPS(0.986)PS(0.014)R;SNETQNPHKPS(0.955)PS(0.045)R;SNETQNPHKPS(0.978)PS(0.022)R;SNETQNPHKPS(0.892)PS(0.108)R 179.46 4.4718e-09 3162020000.0 1988210.0 1865690.0 1808550.0 2276900.0 1783170.0 1755810.0 1827540.0 1739070.0 2188530.0 1611130.0 True False 1877920.0279016248 1776059.4519422154 1925132.0267823134 2493295.8914250536 1923495.334150564 1744851.338505349 2012285.5782716007 1733037.572071988 1791148.1203516817 1596856.6416401726 1.1760104062771501 1.1122222281130878 1.2055759900932377 1.5613774126048818 1.2045510435895437 1.0926787621418332 1.2601541840379173 1.0852806237458739 1.1216712093278125 1.0 20.606803369438197 -7.576886528379995 0.821500730423669 1.0098648432584263 1.24412417094922 0.2747582396412993 0.12343985653444714 0.85613004904694 1.1654801723771575 0.12517163385847493 0.049877042643428966 2.649192223996111e-08 7.576886528379995 0.2342593276907936 SNILSDNPDFS(ph)DEADIIK ddPTM_KYSE-520_SHP099_60min_R1 4 SNILSDNPDFSDEADIIK 18 0 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 SNILSDNPDFS(1)DEADIIK;SNILSDNPDFS(1)DEADIIK;SNILSDNPDFS(1)DEADIIK;SNILSDNPDFS(1)DEADIIK 362.24 1.5975999999999996e-65 368121000.0 798833.0 750017.0 660738.0 581986.0 646078.0 742268.0 590609.0 711893.0 856460.0 747421.0 True False 754520.1410558942 713985.0575215316 703330.2286981789 637297.7744595284 696920.6629190316 737635.2300816649 650313.5215083737 709423.6093400748 700948.4535996314 740799.431424738 1.0185214904994837 0.9638034631700029 0.9494205838488607 0.8602838331474544 0.9407683555840252 0.9957286666149464 0.8778536995603009 0.9576459959960825 0.9462054422092854 1.0 19.49872346574416 -8.467573637063149 1.9770567877252911 0.9999818597972434 0.9428665748214666 0.11434716900342912 0.0450141497938824 8.674824180447791 33.91141916918296 0.04423542503088936 0.01225009067114994 3.4074254509405973e-09 8.467573637063149 -0.05711528497577678 SNIS(ph)PNFNFMGQLLDFER ddPTM_KYSE-520_SHP099_60min_R1 1 SNISPNFNFMGQLLDFER 18 0 Q99956;F8VW29;Q16828-2;Q16829-2;Q16828;Q16829 Q99956 DUSP9;DUSP6;DUSP7 Dual specificity protein phosphatase 9;Dual specificity protein phosphatase 6;Dual specificity protein phosphatase 7 1 S(0.009)NIS(0.991)PNFNFMGQLLDFER 118.37 0.0012872 35976000.0 56183.0 53107.0 53872.0 47221.0 45270.0 47660.0 43036.0 49202.0 66880.0 54516.0 True False 53066.416991966194 50555.66000476784 57344.67531824761 51708.86964248865 48832.491448934285 47362.536261420675 47386.49887088469 49031.32974583315 54736.27790760025 54033.0306528062 0.9821106895326479 0.935643612693456 1.0612892637231597 0.9569862918618864 0.9037525909422254 0.876547839149587 0.8769913199089393 0.9074325306845752 1.0130151362286677 1.0 15.721553982950162 -5.52577880884296 11.475741782735756 0.9206593229564539 0.9909191222073769 0.2177196887379561 0.05217567380928867 0.1887764611557163 610.2728392986523 0.01544327026133937 0.020509581550209075 2.9800338083596266e-06 5.52577880884296 0.07025979925092296 SNLDEEVNVIPPHT(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 7 SNLDEEVNVIPPHTPVR 17 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR;SNLDEEVNVIPPHT(1)PVR 191.07 1.2143e-11 5510190000.0 2522940.0 2704540.0 1936630.0 1855810.0 1867540.0 2579030.0 2115810.0 2600070.0 2870640.0 2676770.0 True False 2382987.4888438014 2574609.838802699 2061468.2685175582 2032185.6244303803 2014504.7731509318 2562933.3171273973 2329696.7231156845 2591050.9640308972 2349404.1389454785 2653055.900295548 0.898204779092042 0.970431809791829 0.7770165220747562 0.7659791956151382 0.7593148613742053 0.9660306504819174 0.8781182193922707 0.9766288617372353 0.8855464141120272 1.0 21.33922364301726 -6.278232125610006 24.958462198006416 0.9358574728389009 0.8347927201089476 0.3690943633875454 0.06981502013894816 1049.1654633234004 1559332.9303097548 0.02662520135849933 0.023544052571796766 5.269481381732971e-07 6.278232125610006 -0.1010647527299533 SNLDTEVTTAKES(ph)PEIEPLPFTLAHER ddPTM_KYSE-520_SHP099_60min_R1 1 SNLDTEVTTAKESPEIEPLPFTLAHER 27 1 A0A3B3IUB9;Q9NR09 A0A3B3IUB9 BIRC6 Baculoviral IAP repeat-containing protein 6 1 SNLDT(0.002)EVT(0.01)T(0.01)AKES(0.979)PEIEPLPFTLAHER 113.33 0.00027626 213360000.0 76943.0 66239.0 55099.0 44328.0 54610.0 69755.0 46956.0 47842.0 60047.0 50906.0 True False 72674.81840793217 63056.779013233914 58650.769701517056 48540.91979230085 58907.496311603754 69319.63317069647 51702.77072639794 47676.047268406735 49143.97846168776 50455.0124442687 1.4403884745486266 1.2497624310941315 1.1624369286659313 0.9620633796477186 1.1675251567259337 1.3738899231719572 1.0247301154371427 0.9449219207124061 0.9740157831884577 1.0 15.622709980283952 -1.0000000000000002 0.4089384599961669 1.0342164736253219 7.704575319588199 0.4979262154050659 0.12012244744639008 73.81577275360193 0.9667367633456148 0.09392640304315722 399.3838342380093 0.09999999999999995 1.0000000000000002 6.670358845962877 SNMS(ph)PDKPVSVK ddPTM_KYSE-520_SHP099_60min_R1 2 SNMSPDKPVSVK 12 1 Q9Y6M7-7;Q9Y6M7-13;Q9Y6M7-6;Q9Y6M7-8;Q9Y6M7-3;H7C3C4;Q9Y6M7-5 Q9Y6M7-7 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 S(0.264)NMS(0.736)PDKPVS(0.001)VK;SNMS(1)PDKPVSVK 126.25 0.00014319 2910500000.0 2790210.0 3443700.0 2667010.0 3648000.0 3192900.0 3488200.0 3389300.0 4456700.0 5026800.0 3143800.0 True False 2635431.4891542615 3278259.4829009143 2838929.731966876 3994704.823188805 3444163.0648840824 3466428.8499179077 3731923.520380366 4441240.747901594 4114059.8353158706 3115948.3778393883 0.8457879173793248 1.0520904345578643 0.9110965227015095 1.282018935743329 1.1053338012205065 1.1124795502297584 1.1976846429555092 1.4253255219141883 1.3203234894952198 1.0 21.5712399016801 -4.731163276915768 0.5902410207589086 1.2500694284428742 0.7501100012461457 0.4378972922304495 0.13060949959096826 2.1284601556242233 0.8207920012219166 0.07404255116484758 0.6756225096593649 1.8571061280802985e-05 4.731163276915768 -0.4999594271967285 SNMS(ph)PHGLPAR ddPTM_KYSE-520_SHP099_60min_R1 4 SNMSPHGLPAR 11 0 H0Y4T7;E7ESY4;Q13330-3;Q13330 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 S(0.002)NMS(0.998)PHGLPAR;S(0.047)NMS(0.953)PHGLPAR;S(0.007)NMS(0.993)PHGLPAR;S(0.001)NMS(0.999)PHGLPAR 106.6 0.00047191 1810350000.0 806850.0 793540.0 717270.0 821390.0 727340.0 701430.0 661616.0 736190.0 914570.0 695580.0 True False 762092.4220844008 755417.1472721767 763506.3718725772 899454.6586400906 784577.5200014994 697052.1151877518 728498.6020299118 733636.3287180383 748507.1424335231 689417.7023530507 1.1054146412012689 1.0957321587389812 1.1074655745952775 1.304658490157945 1.1380292634257272 1.0110737116390311 1.0566868235954403 1.0641390933451014 1.0857092005018065 1.0 19.395018818063765 -6.170184356807932 6.3323963450679805 1.0486207316256781 1.1544836889086578 0.43980135847526836 0.06016277514183457 0.25953522025155584 14.968091105759072 0.021321124720890778 0.02132827062663109 6.757960409421961e-07 6.170184356807932 0.10586295728297967 SNNWS(ph)LEDVTASDK ddPTM_KYSE-520_SHP099_60min_R1 5 SNNWSLEDVTASDK 14 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 SNNWS(1)LEDVTASDK;SNNWS(1)LEDVTASDK;SNNWS(1)LEDVTASDK;SNNWS(1)LEDVTASDK;SNNWS(1)LEDVTASDK 374.24 1.0860999999999996e-67 5185640000.0 4797310.0 4263840.0 3754840.0 3734040.0 4303970.0 4118910.0 4111300.0 4117720.0 4595940.0 4456880.0 True False 4531193.651099605 4058998.7262456766 3996882.9943564166 4088922.038919942 4642667.952760536 4093202.3548579128 4526910.326421323 4103436.590403073 3761433.150219145 4417395.510600171 1.0257613655436464 0.9188669469386497 0.904805328109137 0.9256409187513298 1.050996665709419 0.9266098869878618 1.024791716195291 0.9289266900725306 0.8515047251696276 1.0 22.07476457888956 -7.5074396700431585 24.452296381780517 0.9139068131695006 0.9647520245953108 0.0853152516073753 0.05895307270145382 1083.224857018682 1715622.30361513 0.033121698469428536 0.015090962349650466 3.108567698991804e-08 7.5074396700431585 0.05084521142581022 SNPKS(ph)PQKPIVR ddPTM_KYSE-520_SHP099_60min_R1 2 SNPKSPQKPIVR 12 2 H7C560;A0A2U3TZI2;A0A2R8Y8E0;P15056;A0A2R8YDP5;A0A2R8YES9;H7C5K3;A0A2R8Y467 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.001)NPKS(0.999)PQKPIVR;S(0.001)NPKS(0.999)PQKPIVR 135.15 3.368e-05 9885700000.0 4540300.0 4565800.0 4317800.0 4031200.0 4158300.0 5098700.0 5132700.0 5420100.0 6696700.0 4778500.0 True False 4288440.508136345 4346452.114594478 4596132.296724268 4414324.035975523 4485534.552509465 5066877.122033261 5651563.406324696 5401298.938160855 5480748.090069189 4736166.207616747 0.9054666411916952 0.9177152836411173 0.9704330665872166 0.9320458451978239 0.9470813218707963 1.069826712137902 1.1932780984830722 1.1404369486599595 1.1572119410114867 1.0 22.175288280083464 -6.361159041698848 3.058869834642175 1.13449126777104 0.9337657812520268 0.7621617160424815 0.050024857572077426 0.11567105256082254 2.0831390545217223 0.018093720222980243 0.015786048628536543 4.353524153684353e-07 6.361159041698848 -0.20072548651901312 SNQNGKDS(ph)KPS(ph)STPR ddPTM_KYSE-520_SHP099_60min_R1 1 SNQNGKDSKPSSTPR 15 2 P06748;P06748-3 P06748 NPM1 Nucleophosmin 2 S(0.012)NQNGKDS(0.83)KPS(0.552)S(0.496)T(0.109)PR 71.07300000000001 0.015883 383000000.0 723680.0 764490.0 643310.0 645930.0 630870.0 591090.0 652950.0 685870.0 863960.0 622920.0 True False 683536.0277796852 727762.7528771149 684778.7919323926 707318.9929940649 680515.8798407156 587400.788056297 718956.5581779005 683490.8770532612 707086.6426592465 617401.4134244266 1.1071176918569752 1.178751355363065 1.1091305867510999 1.1456387653389213 1.1022259830378807 0.9514082334186269 1.1644880341141377 1.107044561596107 1.1452624294093843 1.0 19.23584926017261 -13.999999999999998 0.31525223577817146 8.906696988167877e-10 1.1162203611634505 0.23481805352432505 0.059808594936133413 495.75643991729186 4.453363192255514 330.6172936161962 0.057287428042376666 1.0000000000000041e-14 13.999999999999998 1.1162203602727807 SNQNGKDS(ph)KPSSTPR ddPTM_KYSE-520_SHP099_60min_R1 2 SNQNGKDSKPSSTPR 15 2 P06748;P06748-3 P06748 NPM1 Nucleophosmin 1 S(0.002)NQNGKDS(0.563)KPS(0.368)S(0.057)T(0.009)PR;SNQNGKDS(0.99)KPS(0.005)S(0.005)T(0.001)PR 133.93 1.2613e-05 1255740000.0 389812.0 322034.0 327589.0 291806.0 288068.0 321428.0 318699.0 312928.0 395975.0 343339.0 True False 368188.3512890435 306563.00325711136 348705.9111009319 319539.15450532734 310737.31271728734 319421.8486243373 350916.2051225042 311842.52580594394 324075.92171743454 340297.28357369977 1.0819608884985508 0.9008682056984965 1.0247096522162247 0.9390000153678079 0.9131348609486902 0.9386552994777538 1.0312048378326377 0.9163826479337933 0.9523317915267693 1.0 18.376436109458822 -4.244534150109469 24.57246016641277 0.9566234151817343 1.0819610142655667 0.4192012005836234 0.043989461158006185 2691.0791165003957 3911521.7174169696 0.010577409302513923 0.2920038268928071 5.694634434448572e-05 4.244534150109469 0.12533759908383235 SNRDELELELAENRK ddPTM_KYSE-520_SHP099_60min_R1 1 SNRDELELELAENRK 15 2 A0A087WY61;Q14980-2;Q14980;Q14980-5;Q14980-4;Q14980-3;F5H6Y5;F5H4J1 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 0 156.5 9.2979e-07 340500000.0 123230.0 103240.0 86479.0 71102.0 99630.0 91988.0 73908.0 82406.0 98159.0 82192.0 False True 116394.18624708538 98280.19543360063 92053.57471129225 77859.51270240429 107470.31418284334 91413.86877078403 81379.34191256962 82120.152819705 80335.79998702368 81463.8428244083 1.4287833990101335 1.2064271955036447 1.1299930315061326 0.9557554616006393 1.3192394374826 1.122140395068553 0.9989627188098551 1.0080564575956887 0.9861528403488641 1.0 16.31387225051922 -1.0000000000000002 0.5282147441125212 1.039901538143269 15.449953647793276 0.5810696697070941 0.09792342905700507 96.05442744130602 0.9429505391488268 0.053788070489636346 1556.0136006485407 0.09999999999999995 1.0000000000000002 14.410052109650007 SNRNS(ph)IER ddPTM_KYSE-520_SHP099_60min_R1 5 SNRNSIER 8 1 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.002)NRNS(0.998)IER;SNRNS(1)IER;SNRNS(1)IER;SNRNS(1)IER;SNRNS(1)IER 133.05 0.00050229 2894060000.0 1873204.0 1576020.0 1467428.0 1425102.0 1617414.0 1604531.0 1354330.0 1283000.0 1684216.0 1572913.0 True False 1769293.6399804046 1500305.6335457515 1562020.756847813 1560543.265607461 1744695.2799731954 1594516.5268584453 1491238.893387056 1278549.5724544504 1378404.8300303086 1558978.2145277963 1.1349059425543746 0.9623647204077086 1.0019516259378507 1.001003895413727 1.1191274282826662 1.0227959005452898 0.9565488981760671 0.8201202303790462 0.8841719641655275 1.0 20.57216933699277 -6.919479883582175 3.3921267458986075 0.888487765981983 1.036966249688356 0.4807495195548621 0.0648737960094103 0.19482639196920593 4.46338009831263 0.02968449272645783 0.018701145534323685 1.203705143837903e-07 6.919479883582175 0.14847848370637307 SNS(ph)APLIHGLSDTSPVFQAEAPSAR ddPTM_KYSE-520_SHP099_60min_R1 3 SNSAPLIHGLSDTSPVFQAEAPSAR 25 0 Q96E09 Q96E09 FAM122A Protein FAM122A 1 S(0.041)NS(0.959)APLIHGLSDTSPVFQAEAPSAR;S(0.115)NS(0.885)APLIHGLSDTSPVFQAEAPSAR;S(0.004)NS(0.996)APLIHGLSDTSPVFQAEAPSAR 274.69 2.3919999999999996e-38 3108960000.0 437113.0 565706.0 428730.0 689980.0 319489.0 507044.0 414815.0 468350.0 601990.0 536543.0 True False 412865.4705268375 538528.6346179823 456366.62179225445 755555.4917499479 344630.9666562531 503879.35031757836 456748.5484042665 466725.40316371137 492683.7909329587 531789.6464441369 0.776369892282602 1.0126722816416347 0.8581713180085287 1.420778867738481 0.648058812277865 0.9475162852207006 0.8588895091477617 0.8776504136259818 0.9264636764317183 1.0 19.02049616368748 SNS(ph)AWQIYLQR ddPTM_KYSE-520_SHP099_60min_R1 2 SNSAWQIYLQR 11 0 Q8N4C8;Q8N4C8-4 Q8N4C8 MINK1 Misshapen-like kinase 1 1 S(0.291)NS(0.709)AWQIYLQR;S(0.108)NS(0.892)AWQIYLQR 80.74600000000001 0.012354 86541000.0 439390.0 593620.0 578320.0 608100.0 552450.0 441520.0 554850.0 568500.0 702520.0 585290.0 True False 415016.16079775087 565101.6041582145 615599.432544717 665893.6411680682 595924.6719894791 438764.30990647216 610939.6528141645 566528.0061888976 574960.0770880284 580104.7859487295 0.7154158539116596 0.974137117717486 1.0611866122392664 1.1478851016183838 1.0272707387077957 0.7563535425567939 1.0531539604780304 0.9765959873307583 0.9911314145559286 1.0 19.14595399625333 -4.268005083635713 4.410495694896534 1.0010563013068505 0.6968824435252984 0.449395820683398 0.09444949615483453 0.1904811503948289 9.151237685277195 0.02517798977086163 0.17956665383588014 5.39504307308441e-05 4.268005083635713 -0.30417385778155215 SNS(ph)EDKLNSK ddPTM_KYSE-520_SHP099_60min_R1 10 SNSEDKLNSK 10 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 S(0.137)NS(0.863)EDKLNSK;SNS(0.989)EDKLNS(0.011)K;SNS(0.993)EDKLNS(0.007)K;S(0.001)NS(0.979)EDKLNS(0.02)K;SNS(0.998)EDKLNS(0.002)K;SNS(0.987)EDKLNS(0.013)K;S(0.001)NS(0.911)EDKLNS(0.088)K;SNS(0.981)EDKLNS(0.019)K;S(0.001)NS(0.988)EDKLNS(0.012)K;S(0.204)NS(0.796)EDKLNSK 221.96 4.121899999999999e-09 12535730000.0 19604580.0 17349310.0 16577540.0 16300020.0 17492540.0 16468300.0 16202790.0 17672180.0 20968850.0 17159650.0 True False 18517074.86663869 16515823.105754757 17646154.753401812 17849169.000020284 18869103.379062083 16365515.231094293 17840726.13719169 17610879.332297835 17161435.421692338 17007628.851005685 1.0887511145061088 0.9710832268531162 1.0375434993313821 1.0494801571922143 1.109449385588299 0.9622455531258008 1.0489837409720253 1.0354694053225697 1.0090433870608342 1.0 24.019678683323015 -7.834007053178115 3.6637914061619847 1.0006620795046337 1.036381472404539 0.09003876686876366 0.042636106246876415 0.5921194458182963 14.52731803083471 0.039269371175815214 0.010617806137030627 1.4655240398567679e-08 7.834007053178115 0.03571939289990533 SNS(ph)ELEDEILCLEK ddPTM_KYSE-520_SHP099_60min_R1 1 SNSELEDEILCLEK 14 0 Q96PC5;Q96PC5-12;Q96PC5-11;Q96PC5-13;Q96PC5-10;Q96PC5-9;Q96PC5-6;G3V599;Q96PC5-14;Q96PC5-7;Q96PC5-5;Q96PC5-8;A0A5F9ZHA4;A0A2R8YE69;A4FU28;G3V5K6;Q8IX94;Q86UF2;A4D2H0;P0CG41 Q96PC5 MIA2;CTAGE9;CTAGE5;CTAGE4;CTAGE6;CTAGE15;CTAGE8 Melanoma inhibitory activity protein 2;cTAGE family member 9;cTAGE family member 4;cTAGE family member 6;cTAGE family member 15;cTAGE family member 8 1 S(0.43)NS(0.57)ELEDEILCLEK 71.558 0.020590999999999998 87395000.0 159820.0 201410.0 162460.0 148580.0 163210.0 170650.0 159690.0 187040.0 234640.0 153910.0 True False 150954.4660067288 191733.96127742634 172932.4315451906 162700.9985277943 176053.69846212844 169584.91005059675 175833.02362421158 186391.201895464 192035.29079305218 152546.4771401681 0.9895637633638927 1.2568888175716482 1.1336376610407775 1.0665667380721986 1.1540987491986499 1.1116933883354958 1.1526521419609481 1.2218650039633332 1.2588641468042527 1.0 17.2188893375976 -7.001321490115378 7.56633230253081 1.1817344507959378 1.1254379779180905 0.025914993789435514 0.089929224113351 0.34292798555605297 147.8328451136818 0.03769818920015385 0.02393549603678863 9.969617813158994e-08 7.001321490115378 -0.056296472877847226 SNS(ph)EVEDVGPTSHNR ddPTM_KYSE-520_SHP099_60min_R1 1 SNSEVEDVGPTSHNR 15 0 Q13206 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 SNS(1)EVEDVGPTSHNR 250.31 4.0064e-18 0.0 102710.0 102670.0 113540.0 122140.0 126490.0 137580.0 149990.0 169120.0 201910.0 170220.0 True False 97012.47155269123 97737.57908918825 120858.97007042322 133748.14887726982 136444.04337034898 136721.3121872903 165152.45296133446 168533.36219290458 165248.23373689578 168711.9832291562 0.5750182630532072 0.5793161648537695 0.7163626895800536 0.7927602196199893 0.8087394905732411 0.8103829352867368 0.9789017341880989 0.9989412664540313 0.9794694518672351 1.0 17.364202923055142 -5.316837736624122 0.4255394234228725 1.0272355733161438 0.43300665439644914 0.9417045388063335 0.03776024551737415 0.5271080391118801 0.14055821756766518 0.03612500311915591 0.14667041393642846 4.821278991252099e-06 5.316837736624122 -0.5942289189196946 SNS(ph)FIGVPNGEVEMPLK ddPTM_KYSE-520_SHP099_60min_R1 2 SNSFIGVPNGEVEMPLK 17 0 Q9H7E2-2;Q9H7E2;Q9H7E2-3 Q9H7E2-2 TDRD3 Tudor domain-containing protein 3 1 S(0.006)NS(0.994)FIGVPNGEVEMPLK;S(0.001)NS(0.999)FIGVPNGEVEMPLK 345.82 7.854500000000001e-54 0.0 436250.0 563660.0 442530.0 375830.0 376910.0 581100.0 385970.0 494460.0 540650.0 573350.0 True False 412050.3428571859 536580.9275290911 471056.19187303487 411548.7702025898 406570.6726754546 577473.1393518995 424987.6143041953 492744.8336678312 442481.58867739385 568270.5650595507 0.7250953475199019 0.9442349481410519 0.8289294234757197 0.7242127175097701 0.7154526341388963 1.0161940013405137 0.7478613893360104 0.8670954717075573 0.7786459758495937 1.0 19.11621846390242 SNS(ph)FNNPLGNR ddPTM_KYSE-520_SHP099_60min_R1 5 SNSFNNPLGNR 11 0 O95835;O95835-2 O95835 LATS1 Serine/threonine-protein kinase LATS1 1 S(0.011)NS(0.989)FNNPLGNR;SNS(1)FNNPLGNR;SNS(1)FNNPLGNR;S(0.001)NS(0.999)FNNPLGNR;SNS(1)FNNPLGNR 226.54 3.6475e-10 8474000000.0 4253360.0 4320230.0 3964830.0 3850830.0 4040550.0 3969550.0 3700920.0 4038820.0 4749580.0 3840660.0 True False 4017417.6419370454 4112679.6660025627 4220409.285752294 4216811.725405739 4358518.297415319 3944774.5660201916 4075045.11109849 4024810.2760876724 3887175.9991683676 3806634.7403882677 1.0553725050928522 1.0803977650829402 1.1086982528094675 1.1077531764909059 1.1449793832782498 1.0362892252745621 1.0705111966384369 1.0573145443623917 1.0211581263433447 1.0 21.860084714346126 -7.474792089268456 0.8463291845190298 1.0013221074748433 1.0953125504332137 0.5693474405713062 0.027389133167961377 0.44982652564213826 0.6187054947632407 0.02685637023402942 0.01082465536029112 3.351258362736338e-08 7.474792089268456 0.09399044295837045 SNS(ph)FSDER ddPTM_KYSE-520_SHP099_60min_R1 6 SNSFSDER 8 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 S(0.074)NS(0.775)FS(0.151)DER;S(0.002)NS(0.998)FSDER;S(0.005)NS(0.941)FS(0.055)DER;S(0.124)NS(0.842)FS(0.034)DER;S(0.299)NS(0.66)FS(0.041)DER;S(0.032)NS(0.916)FS(0.052)DER 134.75 0.00066104 21926230000.0 19826030.0 18381170.0 17273050.0 17241190.0 18377730.0 15404440.0 14503660.0 15109750.0 17826370.0 14214490.0 True False 18726240.593689054 17498111.002501328 18386498.440857153 18879787.513847187 19823952.796019964 15308295.175973134 15969831.494880911 15057337.803892162 14589550.574218145 14088560.677305866 1.329180533243091 1.2420084211077453 1.3050657808128328 1.3400792278418565 1.4070956750005543 1.086576232065497 1.1335317965166898 1.0687633853291219 1.0355600482112615 1.0 23.748020894043623 -6.277644990944762 23.170936378835425 1.0734742737623062 1.3198578943012695 0.8705362738661858 0.05002230608861112 117.1894381246063 167557.70290165558 0.01853334394380589 0.016409207022737345 5.276610156377573e-07 6.277644990944762 0.24638362053896334 SNS(ph)GLGGEVSGVMSKPNVDPQPWFQDGPK ddPTM_KYSE-520_SHP099_60min_R1 1 SNSGLGGEVSGVMSKPNVDPQPWFQDGPK 29 1 C9JRJ5;Q9UGP4 C9JRJ5 LIMD1 LIM domain-containing protein 1 1 S(0.152)NS(0.848)GLGGEVSGVMSKPNVDPQPWFQDGPK 158.37 1.9177e-08 284650000.0 964880.0 758450.0 538960.0 558430.0 628360.0 862020.0 727520.0 901080.0 1035300.0 790920.0 True False 911356.1829594069 722012.9235433404 573702.2239664897 611503.0193018982 677808.3571206621 856639.8134299156 801064.8215109684 897954.3637936536 847315.6177891529 783913.0641264481 1.1625730258430822 0.9210369830332066 0.7318441932152178 0.7800648404594779 0.8646473545838612 1.0927739983317033 1.021879667745598 1.145476973003744 1.080879572702819 1.0 19.580334142925214 -6.260639918649796 24.945672570695933 1.074399209796457 0.8785247282138342 0.3747345450495172 0.11296816472518763 76.841351199362 2397712.6459988737 0.040996445980240125 0.03877004410539112 5.487317396985407e-07 6.260639918649796 -0.19587448158262277 SNS(ph)GRELTDEEILASVMIK ddPTM_KYSE-520_SHP099_60min_R1 3 SNSGRELTDEEILASVMIK 19 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 S(0.178)NS(0.816)GRELT(0.006)DEEILASVMIK;S(0.18)NS(0.817)GRELT(0.004)DEEILASVMIK;S(0.185)NS(0.789)GRELT(0.026)DEEILASVMIK 247.04 1.6323000000000003e-26 2218092000.0 3733210.0 4259500.0 4020230.0 2700670.0 2969310.0 3037490.0 2475560.0 3055360.0 5008910.0 3061380.0 True False 3526121.39933037 4054867.2263601534 4279380.458395432 2957340.864813954 3202977.803937157 3018531.8982102945 2725813.7639373373 3044761.669286388 4099418.2083456665 3034258.554917598 1.162103141677104 1.3363618007399083 1.4103545828221773 0.9746502518781782 1.0556047699844553 0.9948169688170392 0.8983459104101834 1.0034615093535018 1.3510444591815594 1.0 21.53291259492371 -5.267367733359411 24.860504121480652 1.0327500265422314 1.3062820410874807 0.4769605430456253 0.12616120704349992 370.8748421882677 1555261.2960562932 0.035966748958126224 0.054970703556351155 5.4029663985834465e-06 5.267367733359411 0.27353201454524934 SNS(ph)ISQIPSLEEMQQLR ddPTM_KYSE-520_SHP099_60min_R1 1 SNSISQIPSLEEMQQLR 17 0 A0A1B0GV57;Q9NYJ8 A0A1B0GV57 TAB2 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 1 SNS(0.999)IS(0.001)QIPSLEEMQQLR 250.08 1.142e-23 103830000.0 118610.0 111260.0 72618.0 62391.0 69835.0 98860.0 60660.0 92402.0 90895.0 92590.0 True False 112030.466856827 105914.90259533533 77299.07247290808 68320.62188146194 75330.61719320354 98242.97806974508 66792.10478454923 92081.47902878893 74390.75927648527 91769.7246339299 1.2207780649197473 1.154137740064391 0.8423156196801793 0.7444788807419156 0.8208656775826441 1.0705380065336039 0.7278228746025274 1.0033971377390813 0.8106241963047242 1.0 16.48573065819364 -4.711027608906692 5.273773515079034 0.8721890846707457 1.199365312805241 0.5652734314251754 0.10895429580620336 0.12829118778018783 7.644878283580246 0.02724480211563609 0.07334532652958352 1.9452364154006618e-05 4.711027608906692 0.3271762281344953 SNS(ph)LNNGQPK ddPTM_KYSE-520_SHP099_60min_R1 8 SNSLNNGQPK 10 0 O60333-3 O60333-3 KIF1B Kinesin-like protein KIF1B 1 S(0.001)NS(0.999)LNNGQPK;S(0.027)NS(0.973)LNNGQPK;SNS(1)LNNGQPK;SNS(1)LNNGQPK;SNS(1)LNNGQPK;SNS(1)LNNGQPK;SNS(1)LNNGQPK;SNS(1)LNNGQPK 216.81 3.9554e-09 9640740000.0 16312780.0 16448500.0 14476920.0 13258590.0 14379280.0 15795330.0 14492830.0 16950800.0 19060700.0 16962010.0 True False 15407877.574679283 15658289.370298158 15410125.427090982 14518682.407259563 15510847.5290884 15696745.486489818 15957906.6927903 16892001.631146476 15599757.361145297 16811739.78764409 0.9164951259835354 0.9313901813901696 0.9166288332880792 0.8636038025005702 0.9226200098866753 0.9336776374582157 0.949212091928682 1.0047741545203654 0.9279085661681757 1.0 24.002965695931792 -6.706493186621506 1.785779674337732 0.9750820305578505 0.9093646021109274 0.5555105513702563 0.026047851681781503 0.27445130387811945 1.7917308836349957 0.013427962264874173 0.008741859157952945 1.9656528182542106e-07 6.706493186621506 -0.06571742844692308 SNS(ph)LPHPAGGGK ddPTM_KYSE-520_SHP099_60min_R1 2 SNSLPHPAGGGK 12 0 G5E9A7;Q09019 G5E9A7 DMWD Dystrophia myotonica WD repeat-containing protein 1 SNS(1)LPHPAGGGK;S(0.002)NS(0.998)LPHPAGGGK 101.3 0.0019413 0.0 1620570.0 1469180.0 1408800.0 1480530.0 1525540.0 1406900.0 1406090.0 1532930.0 1786220.0 1394800.0 True False 1530673.7515737966 1398598.3875158597 1499613.5021596968 1621239.1260624223 1645591.3188647497 1398119.015236943 1548231.2993159732 1527612.623618551 1461887.474941894 1382443.157137978 1.1072236450883777 1.0116859997421719 1.0847559947884529 1.1727347469525005 1.1903500772296185 1.0113392424260093 1.119924020978353 1.105009356609723 1.057466607139484 1.0 20.39878873072369 -8.034696063927738 3.006687426397271 1.0001907865343758 1.0999287732476246 0.24749250679234658 0.054645889598806535 0.40649301694797696 9.105260671499417 0.05544256302940815 0.014828684269826125 9.232173042931349e-09 8.034696063927738 0.09973798671324885 SNS(ph)LPHSAVSNAGSK ddPTM_KYSE-520_SHP099_60min_R1 2 SNSLPHSAVSNAGSK 15 0 A0A088AWN2;Q8TBZ3-4;Q8TBZ3-5;Q8TBZ3-6;Q8TBZ3;Q8TBZ3-2;Q8TBZ3-7 A0A088AWN2 WDR20 WD repeat-containing protein 20 1 S(0.001)NS(0.758)LPHS(0.238)AVS(0.003)NAGSK;S(0.002)NS(0.488)LPHS(0.488)AVS(0.023)NAGSK 156.41 1.4592e-06 735280000.0 589840.0 831850.0 686100.0 1456010.0 537160.0 631080.0 625300.0 606360.0 798380.0 606050.0 True False 557120.3993831107 791886.6773676941 730327.1037988137 1594388.7526346294 579431.4359776792 627141.1956327606 688511.4263399057 604256.6786854881 653414.3175219783 600680.8684997649 0.9274815107305664 1.3183151302046237 1.2158321366599334 2.654302536081609 0.9646244226569802 1.0440505574933356 1.1462183373003083 1.0059529283738533 1.087789459907252 1.0 19.196239189641215 SNS(ph)LRLS(ph)LIGDR ddPTM_KYSE-520_SHP099_60min_R1 1 SNSLRLSLIGDR 12 1 O94915;H0Y9X0;A0A2C9F2R7;A0A286YEZ9 O94915 FRYL Protein furry homolog-like 2 S(0.427)NS(0.573)LRLS(1)LIGDR 46.891999999999996 0.063881 60320000.0 48396.0 52450.0 46150.0 40943.0 44510.0 46892.0 37456.0 43822.0 55577.0 47117.0 True False 45711.37740496583 49930.22327094492 49124.9028426108 44834.21041003819 48012.683772742785 46599.32963429576 41242.41801533266 43669.991710131675 45485.61778215763 46699.58003647133 0.9788391537839584 1.0691792780995146 1.0519345742348292 0.9600559657072649 1.028118105885448 0.9978532911410065 0.8831432313336277 0.9351260049025363 0.9740048571450616 1.0 15.511121955565233 -6.5407692041197505 23.91413953786001 0.9423531467133377 1.0185761273600429 0.39183090115804164 0.040805865645812296 139.56954511761273 186559.68852821938 0.015615528512741615 0.01209859044339134 2.8789279487663335e-07 6.5407692041197505 0.07622298064670519 SNS(ph)LSEQLAINT(ph)SPDAVK ddPTM_KYSE-520_SHP099_60min_R1 1 SNSLSEQLAINTSPDAVK 18 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 2 S(0.415)NS(0.578)LS(0.006)EQLAINT(0.621)S(0.379)PDAVK 94.463 0.0025248000000000002 710750000.0 879930.0 683150.0 711290.0 734900.0 792220.0 928150.0 787120.0 832580.0 944280.0 825940.0 True False 831118.5288030327 650330.4485709446 757140.8915042395 804744.6750442574 854563.2068847966 922357.0715702395 866689.7711509139 829691.974305633 772822.5553616747 818622.8141715963 1.0152643127153516 0.7944201374708145 0.9248959085881655 0.9830469675568683 1.0439034828873786 1.1267180142097761 1.0587168548777361 1.0135216853750137 0.9440520615635798 1.0 19.64283934819751 -5.391723237331162 2.6324709224420255 1.0370867224338582 0.8976965082992666 0.3883428816647281 0.06648113750236526 0.26496681858138027 3.5617795210716405 0.02036424764678007 0.03305467434271298 4.05767036067311e-06 5.391723237331162 -0.13939021413459163 SNS(ph)LSEQLAINTS(ph)PDAVK ddPTM_KYSE-520_SHP099_60min_R1 2 SNSLSEQLAINTSPDAVK 18 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 2 S(0.404)NS(0.567)LS(0.029)EQLAINT(0.185)S(0.815)PDAVK;S(0.337)NS(0.643)LS(0.021)EQLAINT(0.003)S(0.997)PDAVK 147.25 1.5827e-05 626050000.0 1800360.0 1573090.0 1554430.0 1578340.0 1766020.0 1670910.0 1623660.0 1718600.0 2153370.0 1682230.0 True False 1700490.4418713197 1497516.3951437715 1654631.0449759373 1728344.959054777 1904995.7267207184 1660481.2308974043 1787795.3981945482 1712638.5777242533 1762372.290040211 1667326.7509551356 1.0198903369703545 0.8981541226312795 0.9923855921030923 1.036596430822385 1.142544930457952 0.9958943140246447 1.0722525726708347 1.0271763328592676 1.057004746688451 1.0 20.669105430570244 -5.165125406925337 3.4548431150473577 1.0516452471692708 0.9571518200267909 0.36070417830372825 0.04787914336696261 0.23026090465088078 5.168078954344226 0.012802614183356426 0.023768039324448178 6.837141893846078e-06 5.165125406925337 -0.09449342714247988 SNS(ph)LSEQLAINTSPDAVK ddPTM_KYSE-520_SHP099_60min_R1 1 SNSLSEQLAINTSPDAVK 18 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 SNS(1)LSEQLAINTSPDAVK 405.22 1.7234999999999996e-107 273190000.0 579900.0 612340.0 470530.0 428310.0 436090.0 682340.0 492670.0 629200.0 715430.0 671940.0 True False 547731.7909980098 582922.2672589214 500861.11667461926 469016.4536239025 470407.80198731495 678081.2629588292 542473.8915958438 627017.4520563837 585525.9465226447 665987.1343614095 0.822435994237651 0.8752755679249932 0.752058246823156 0.7042425137440907 0.7063316657586362 1.0181597030534475 0.8145410978787181 0.941485833142419 0.8791850717718204 1.0 19.345134781805008 -6.253788604937335 24.99016167989032 0.9197588790331591 0.772922683483013 0.5458534967314683 0.07198943312356912 519.7381587765711 1697651.178370894 0.024829259257615494 0.024386060524035677 5.574570279659006e-07 6.253788604937335 -0.14683619555014615 SNS(ph)LSTPRPTR ddPTM_KYSE-520_SHP099_60min_R1 5 SNSLSTPRPTR 11 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(0.016)NS(0.962)LS(0.022)TPRPTR;S(0.006)NS(0.97)LS(0.025)TPRPTR;S(0.044)NS(0.931)LS(0.025)TPRPTR;SNS(0.836)LS(0.064)T(0.064)PRPT(0.035)R;S(0.145)NS(0.827)LS(0.026)T(0.001)PRPTR 107.99 0.00034119 9810060000.0 1587850.0 1486370.0 1572760.0 1519050.0 1577110.0 1534050.0 1400090.0 1375720.0 1872210.0 1552990.0 True False 1499768.7951994983 1414962.5541131464 1674142.6261049754 1663420.0552809648 1701219.5844715876 1524475.4249230449 1541624.7607616168 1370947.948415463 1532263.8585733895 1539231.716807936 0.9743619357777553 0.9192654612441982 1.08764821295186 1.0806820292987276 1.1052394294470376 0.9904132095747787 1.0015547002621823 0.8906702827424448 0.995473158356562 1.0 20.553779001461923 -6.785493862792782 2.5878407135602 0.9578010887472652 1.0324089973130202 0.1786638995260077 0.06032356163834145 0.465097652215314 6.361644269796981 0.030593437374262875 0.02015111005697683 1.6387252186711505e-07 6.785493862792782 0.07460790856575494 SNS(ph)LVSTFTMEK ddPTM_KYSE-520_SHP099_60min_R1 10 SNSLVSTFTMEK 12 0 Q9HB21 Q9HB21 PLEKHA1 Pleckstrin homology domain-containing family A member 1 1 SNS(1)LVSTFTMEK;SNS(1)LVSTFTMEK;SNS(1)LVSTFTMEK;SNS(1)LVSTFTMEK;SNS(0.545)LVS(0.454)T(0.001)FTMEK;SNS(0.984)LVS(0.016)TFTMEK;S(0.17)NS(0.83)LVSTFTMEK;S(0.007)NS(0.934)LVS(0.045)T(0.013)FT(0.001)MEK;S(0.001)NS(0.99)LVS(0.009)TFTMEK;S(0.033)NS(0.961)LVS(0.006)TFTMEK 223.03 5.5497e-11 6685040000.0 6972200.0 7559690.0 6727450.0 5831003.0 5585202.0 6386100.0 5848560.0 6887450.0 8459020.0 7016630.0 True False 6585438.167263878 7196511.145073977 7161112.191300575 6385179.771965023 6024725.621947654 6346241.981096477 6439789.5212450335 6863559.043492912 6923075.202541106 6954468.117055534 0.9469362798735641 1.034803959691014 1.029713857446302 0.9181406348395852 0.8663100499623073 0.9125416745433905 0.9259931044117847 0.9869279617028265 0.9954859359499487 1.0 22.72950874991065 -5.2630030836189965 24.988184042596306 0.9378321190608818 1.0069166263284535 0.2611514029357659 0.04558201437412255 175.72550778386002 2808125.646230495 0.0136531399708765 0.021527999399241566 5.457539860631425e-06 5.2630030836189965 0.06908450726757165 SNS(ph)MLELAPK ddPTM_KYSE-520_SHP099_60min_R1 9 SNSMLELAPK 10 0 Q9P2M7-2;Q9P2M7;A6PVU7;A2A3M4 Q9P2M7-2 CGN Cingulin 1 S(0.143)NS(0.857)MLELAPK;SNS(1)MLELAPK;SNS(1)MLELAPK;SNS(1)MLELAPK;SNS(1)MLELAPK;S(0.002)NS(0.998)MLELAPK;SNS(1)MLELAPK;S(0.001)NS(0.999)MLELAPK;SNS(1)MLELAPK 234.47 1.7297999999999999e-13 11764970000.0 13855050.0 13557340.0 10553310.0 9066360.0 10347350.0 12341480.0 9850710.0 12814960.0 15602040.0 12727650.0 True False 13086482.757142572 12906025.0364178 11233593.248493008 9928024.12849946 11161627.576631987 12264452.245480428 10846515.900465023 12770507.894794159 12769102.831421908 12614892.92296187 1.0373835780502192 1.023078445075503 0.8905024653871938 0.7870081965125744 0.8847976470981676 0.9722200830699431 0.859818308938793 1.0123358139290295 1.0122244326132441 1.0 23.58862462477327 -7.289223529828811 23.753650087096887 1.0092101496801664 0.9200781929075417 0.23460539374414813 0.07116908438469964 663.9590323364118 567636.4777295395 0.04306020315359648 0.020694674136793 5.137791432155568e-08 7.289223529828811 -0.08913195677262475 SNS(ph)PDKFK ddPTM_KYSE-520_SHP099_60min_R1 7 SNSPDKFK 8 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 S(0.002)NS(0.998)PDKFK;S(0.172)NS(0.828)PDKFK;S(0.041)NS(0.959)PDKFK;S(0.08)NS(0.92)PDKFK;S(0.001)NS(0.999)PDKFK;S(0.005)NS(0.995)PDKFK;SNS(1)PDKFK 140.14 0.00040989 29270500000.0 47421880.0 40351500.0 37468460.0 41355830.0 42980520.0 41578290.0 43275620.0 44164230.0 48301360.0 40337340.0 True False 44791293.78322586 38412953.37116371 39883736.88325566 45286275.64911637 46362842.39829357 41318784.46942645 47650341.998950526 44011034.594138816 39531050.60219867 39979982.5495756 1.1203430048445915 0.9608046557682022 0.9975926536185805 1.1327237472642944 1.1596513915633444 1.03348680600825 1.1918549974318673 1.1008267584800637 0.988771081957821 1.0 25.252774506588068 -3.9219703320354578 20.668901659681797 1.0704241219823447 3.167112363921195 0.04078774289085574 0.07604243429816464 2206.2661731719495 650347.7488226467 0.01909724214057362 24248.67734911533 0.00011968222870510489 3.9219703320354578 2.09668824193885 SNS(ph)PDKFKR ddPTM_KYSE-520_SHP099_60min_R1 3 SNSPDKFKR 9 2 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 S(0.028)NS(0.972)PDKFKR;S(0.051)NS(0.949)PDKFKR;S(0.152)NS(0.848)PDKFKR 56.122 0.043717 1186680000.0 2790120.0 2403960.0 2068110.0 2368420.0 2373380.0 2437590.0 2210290.0 2638250.0 2605960.0 2183150.0 True False 2635346.4816336767 2288470.153182476 2201423.679692999 2593513.924708559 2560151.503315036 2422376.0966319023 2433727.683551627 2629098.526522181 2132783.354905651 2163808.989465 1.217920109614326 1.057611907670417 1.0173835539140168 1.1985872770358548 1.1831689006653177 1.119496271817797 1.1247423850260296 1.2150326296464011 0.9856615649946902 1.0 21.04514172000728 -7.780268262600584 24.97293641840142 0.9928305705580462 1.136760645211769 0.4702175711146074 0.063047871515743 256.2010160214497 339792.303787431 0.06224256118949991 0.01618020433777844 1.6585621013543457e-08 7.780268262600584 0.14393007465372265 SNS(ph)PGTASSGSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SNSPGTASSGSSR 13 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 S(0.309)NS(0.671)PGT(0.019)AS(0.001)SGSSR 69.431 0.053063 0.0 89903.0 79709.0 66217.0 71277.0 68768.0 91597.0 89234.0 69883.0 92916.0 96740.0 True False 84915.90137281276 75879.65999435169 70485.45377094593 78051.1446497885 74179.65036360313 91025.30914681808 98254.64355991554 69640.5921838148 76044.79662174924 95882.95886258117 0.8856203686258126 0.7913779559421181 0.7351197189478186 0.8140251988014982 0.7736479061927669 0.9493377157590115 1.0247352055617458 0.7263083347649215 0.7931002289023656 1.0 16.54898680950549 -6.2464728411517925 24.38777283953427 0.8894680024627342 0.7966609026647652 0.22443079108080644 0.0908663208245615 1053.9093257933098 1717331.5394124503 0.031765053213877036 0.03163291259787695 5.669270235130153e-07 6.2464728411517925 -0.09280709979796897 SNS(ph)PLPSIQLQPQS(ph)PSASKK ddPTM_KYSE-520_SHP099_60min_R1 1 SNSPLPSIQLQPQSPSASKK 20 1 Q08174;Q08174-2 Q08174 PCDH1 Protocadherin-1 2 S(0.173)NS(0.826)PLPSIQLQPQS(0.982)PS(0.009)AS(0.009)KK 105.63 1.0465e-05 0.0 292010.0 278990.0 212620.0 347760.0 350920.0 322580.0 243970.0 358970.0 569730.0 270190.0 True False 275811.623192497 265586.9016274728 226325.82540402803 380811.00584214384 378535.4075383257 320566.6585650243 268632.86851774674 357724.8168542282 466281.3937245386 267796.3268046393 1.0299305688151017 0.9917496061147308 0.8451416347063472 1.4220172859949276 1.4135197896663905 1.1970539790072685 1.0031237983100407 1.3358092738710072 1.7411791987150615 1.0 18.030776646685762 -5.2610069366299435 24.999985647142935 1.3036507032539952 0.9592214966152393 0.3683588079131779 0.2077263503169094 43.945153722514796 2540439.8318675784 0.05924026477561043 0.09505267637875967 5.482682078120298e-06 5.2610069366299435 -0.344429206638756 SNS(ph)PLPVPPSK ddPTM_KYSE-520_SHP099_60min_R1 12 SNSPLPVPPSK 11 0 Q13247;Q13247-3 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.465)NS(0.535)PLPVPPSK;S(0.014)NS(0.986)PLPVPPSK;S(0.008)NS(0.992)PLPVPPSK;S(0.009)NS(0.991)PLPVPPSK;S(0.003)NS(0.997)PLPVPPSK;S(0.006)NS(0.994)PLPVPPSK;S(0.037)NS(0.963)PLPVPPSK;S(0.007)NS(0.993)PLPVPPSK;SNS(1)PLPVPPSK;S(0.01)NS(0.99)PLPVPPSK;S(0.021)NS(0.979)PLPVPPSK;S(0.029)NS(0.971)PLPVPPSK 181.77 2.3947e-06 134966200000.0 213782200.0 236587900.0 173166800.0 161114200.0 162554200.0 229389800.0 174166100.0 215360500.0 243273300.0 239172900.0 True False 201923275.20174986 225221862.15832207 184329409.00467646 176426445.12724954 175346290.73312008 227958093.17037427 191772509.0853329 214613464.6910184 199101001.14083457 237054014.17970031 0.8518028091634873 0.9500866835673628 0.7775840018677953 0.7442457607720928 0.7396891857743345 0.9616293314382316 0.8089823315118322 0.9053357119206143 0.8398971931768461 1.0 27.82064058240203 -6.263527636934144 24.99973647312149 0.8913657310189004 0.8145634333275719 0.253938360324932 0.07618471537082183 339.33753166896696 4062380.656622445 0.027453858772122978 0.025418798408975322 5.450952066926161e-07 6.263527636934144 -0.07680229769132851 SNS(ph)SSEAVLGQEELSAQAK ddPTM_KYSE-520_SHP099_60min_R1 1 SNSSSEAVLGQEELSAQAK 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.002)NS(0.333)S(0.333)S(0.333)EAVLGQEELSAQAK 342.34 3.0838999999999995e-54 0.0 200050.0 265110.0 206310.0 184090.0 185750.0 297810.0 271110.0 352130.0 397980.0 332440.0 True False 188952.8277102117 252373.71766177742 219609.07270767106 201585.85825132314 200367.46822707195 295951.2573229897 298516.4445786212 350908.54321776005 325716.86425937194 329494.84023440623 0.5734621749335699 0.7659413345660769 0.6665023116945891 0.6118027769658327 0.6081050255127769 0.8981969402387204 0.9059821524557208 1.0649894941241564 0.9885340360038822 1.0 18.32989634778389 -6.476209005704829 2.242338100680584 1.000838731439497 0.650254960657677 0.8751045282843475 0.06207120890401524 0.10549649988910093 1.0556720869902492 0.026788551842081662 0.02141354744155379 3.3403424621444675e-07 6.476209005704829 -0.3505837707818201 SNS(ph)TTQVSQPR ddPTM_KYSE-520_SHP099_60min_R1 3 SNSTTQVSQPR 11 0 I3L2J8;Q9UPN4-3;Q9UPN4-2;Q9UPN4 I3L2J8 CEP131 Centrosomal protein of 131 kDa 1 SNS(0.976)T(0.024)TQVSQPR;SNS(0.972)T(0.028)TQVSQPR;SNS(0.997)T(0.003)TQVSQPR 246.68 1.5427000000000003e-09 473650000.0 1262010.0 1187880.0 1092710.0 965750.0 891650.0 1188240.0 1137180.0 1308910.0 1577250.0 1345600.0 True False 1192003.789545436 1130812.461755769 1163147.8349978162 1057534.5896366746 961817.7822054841 1180823.7534047526 1252137.2522072836 1304369.6967118909 1290861.1592368807 1333679.0308609589 0.8937711113114943 0.8478895113360004 0.8721347551269094 0.7929453527915044 0.7211763549919361 0.8853882576548194 0.9388595180948179 0.9780236972533434 0.9678949202669573 1.0 20.346980072202133 -6.717219895486176 2.802559361189619 0.9747079081008 0.826342914736559 0.6897187521102264 0.04605240052329461 0.16872458204938057 2.7038785929993696 0.02217266003986451 0.015477546120412066 1.917697510734001e-07 6.717219895486176 -0.14836499336424103 SNS(ph)VEKPVSSILSR ddPTM_KYSE-520_SHP099_60min_R1 2 SNSVEKPVSSILSR 14 1 H0YJN0;Q9UI08-5;Q9UI08;Q9UI08-2;Q9UI08-4;Q9UI08-3 H0YJN0 EVL Ena/VASP-like protein 1 S(0.002)NS(0.998)VEKPVSSILSR;S(0.004)NS(0.996)VEKPVSSILSR 165.17 2.2038000000000002e-08 1865510000.0 1261230.0 1116350.0 904540.0 957430.0 1069230.0 1274520.0 1085720.0 1264900.0 1439750.0 1042750.0 True False 1191267.0577003264 1062718.8703244883 962848.0957151714 1048423.8593381732 1153372.3179134952 1266565.2479208119 1195475.173206082 1260512.3571298793 1178327.6931439526 1033512.0462472235 1.1526397413807858 1.0282597809897982 0.9316273566538104 1.0144282915183194 1.1159737538633394 1.2254963573185487 1.15671140703871 1.2196397339604454 1.1401199409552776 1.0 19.979123773723575 -5.899033515243184 4.173995729324214 1.1634378434147217 1.0248139755133105 0.32727858113681285 0.07725123111267591 0.22048875284523714 7.015672854243436 0.024393589077352715 0.027930368060249594 1.261730160972839e-06 5.899033515243184 -0.13862386790141112 SNS(ph)VGIQDAFNDGSDSTFQKR ddPTM_KYSE-520_SHP099_60min_R1 4 SNSVGIQDAFNDGSDSTFQKR 21 1 O14497-2;O14497;A0A087WUV6;H0Y488;A0A1B0GTU5;O14497-3 O14497-2 ARID1A AT-rich interactive domain-containing protein 1A 1 SNS(1)VGIQDAFNDGSDSTFQKR;S(0.268)NS(0.732)VGIQDAFNDGSDSTFQKR;S(0.161)NS(0.839)VGIQDAFNDGSDSTFQKR;S(0.174)NS(0.826)VGIQDAFNDGSDSTFQKR 183.47 3.1657e-13 2210320000.0 1344930.0 1459550.0 1251310.0 1082470.0 1029600.0 1145792.0 915850.0 1073870.0 1708870.0 1170610.0 True False 1270324.0518485138 1389431.0271707852 1331971.4447667901 1185347.623343527 1110623.6623773521 1138640.687118038 1008433.0558346444 1070144.9956131421 1398582.2851070699 1160239.3061207999 1.0948810690578796 1.1975383180356785 1.1480144119752052 1.021640636625797 0.9572367153209668 0.9813843412399329 0.8691595350327237 0.9223485103182003 1.2054257063425626 1.0 20.145990969631168 -5.341866097418025 3.3630743133776484 0.9795915588924516 1.1537460826552293 0.4026690697244426 0.08540616388310476 0.23310540620527176 5.089786047436613 0.025205630597399886 0.040323884382080545 4.551283646476772e-06 5.341866097418025 0.17415452376277762 SNS(ph)WVNTGGPK ddPTM_KYSE-520_SHP099_60min_R1 2 SNSWVNTGGPK 11 0 Q96N67-2;Q96N67-6;Q96N67;A0A1B0GWE0;A0A0U1RRC1 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 S(0.031)NS(0.969)WVNTGGPK;S(0.027)NS(0.972)WVNT(0.001)GGPK 94.09 0.0024363 1641410000.0 2247350.0 2040670.0 1933680.0 2125950.0 2200160.0 2152080.0 1846430.0 2229610.0 2491910.0 2171090.0 True False 2122685.015518842 1942633.1500918833 2058328.1067973922 2327999.648809823 2373300.074802014 2138648.070446458 2033085.1638202355 2221876.0033048857 2039441.9599391187 2151855.83168246 0.9864438798667983 0.9027710506855876 0.9565362495442171 1.081856699939625 1.1029084940817875 0.9938621532904112 0.9448054715778232 1.0325394343763632 0.9477595710231903 1.0 21.03714999392688 -5.0244445415286805 23.784942843050022 1.0162963189579717 0.9408690038246357 0.26145989905037026 0.051155921914982604 512.230249361547 498409.7565219086 0.014776552542064591 0.025790758047257212 9.452690935642247e-06 5.0244445415286805 -0.075427315133336 SNSGLATYS(ph)PPMGPVSER ddPTM_KYSE-520_SHP099_60min_R1 3 SNSGLATYSPPMGPVSER 18 0 H0Y465;P21359-2;P21359-6;P21359;P21359-4;J3KSB5 H0Y465;J3KSB5 NF1 Neurofibromin;Neurofibromin truncated 1 SNSGLAT(0.002)YS(0.998)PPMGPVSER;SNSGLAT(0.005)YS(0.995)PPMGPVSER;SNSGLAT(0.134)Y(0.237)S(0.629)PPMGPVSER 350.0 1.2622999999999999e-59 1654740000.0 1636800.0 1998640.0 1250280.0 1136040.0 1217100.0 1725150.0 1369800.0 1629170.0 1895730.0 1668880.0 True False 1546003.4411200953 1902622.3343802004 1330875.0493187304 1244008.900037119 1312878.8456482869 1714382.698938101 1508272.7519597053 1623518.7895211359 1551513.2194643398 1654095.0215689915 0.9346521336202525 1.150249719375534 0.8045940722657693 0.7520782565787029 0.7937142839611209 1.036447529666055 0.9118416610244274 0.981514827353236 0.937983126261182 1.0 20.65761068364516 -6.27433426682728 24.957312521626726 0.9685448628404871 0.8895992972234131 0.1386573453971477 0.10733962958811992 2004.9774930679348 3880508.9310808824 0.04186802768983383 0.0371583285562892 5.316988649163003e-07 6.27433426682728 -0.078945565617074 SNSLS(ph)TPRPTR ddPTM_KYSE-520_SHP099_60min_R1 1 SNSLSTPRPTR 11 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 SNS(0.261)LS(0.366)T(0.366)PRPT(0.007)R 110.15 0.00048012 1930000000.0 1126700.0 970710.0 1029300.0 1043300.0 993410.0 990680.0 906100.0 991550.0 1290400.0 1040500.0 True False 1064199.704979233 924075.6345345844 1095650.32493823 1142454.9183204179 1071585.7152702862 984496.7986459126 997697.4306838133 988110.5444795107 1056095.8883368329 1031281.9794967494 1.0319192288209544 0.8960455558289886 1.062415853977097 1.1078007189439296 1.0390811985226431 0.9546339587222621 0.9674341746674127 0.9581380884418191 1.0240612260598139 1.0 19.976007426569684 -6.254015583868857 24.732949215633262 0.9773984127952924 1.0265583229574853 0.1571146878572085 0.053648812734881035 1065.8658645846872 3551019.028413382 0.019398914009752542 0.01902093527469581 5.571657556918237e-07 6.254015583868857 0.0491599101621929 SNSLSEQLAINTS(ph)PDAVK ddPTM_KYSE-520_SHP099_60min_R1 7 SNSLSEQLAINTSPDAVK 18 0 Q5T1M5;Q5T1M5-2;Q5T1M5-3 Q5T1M5 FKBP15 FK506-binding protein 15 1 SNSLSEQLAINT(0.026)S(0.974)PDAVK;SNSLSEQLAINT(0.015)S(0.985)PDAVK;SNSLSEQLAINTS(1)PDAVK;SNSLSEQLAINT(0.06)S(0.94)PDAVK;SNSLSEQLAINT(0.001)S(0.999)PDAVK;SNSLSEQLAINT(0.002)S(0.998)PDAVK;SNSLSEQLAINT(0.013)S(0.987)PDAVK 424.15 2.8668e-102 12981100000.0 9516710.0 11168880.0 7444830.0 6123400.0 6881770.0 8847300.0 6870980.0 9122150.0 10852430.0 9413800.0 True False 8988799.125208953 10632310.239969343 7924735.653949161 6705366.094932655 7423326.147084874 8792080.718960704 7565565.712702642 9090507.390775822 8881902.279497292 9330401.055825584 0.9633882907526954 1.139534107521658 0.8493456611922622 0.7186578642025311 0.7956063306035492 0.9423046947667089 0.8108510735429707 0.9742890296339427 0.9519314578607246 1.0 23.153507664207776 -9.958715669271145 19.83059945078769 0.9999999999998954 0.9020092438730203 0.06003867941800589 0.11204835555552067 0.0 0.0 0.1185943075547282 0.02876334450853712 1.0997255894102889e-10 9.958715669271145 -0.09799075612687513 SNSPGT(ph)ASSGSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SNSPGTASSGSSR 13 0 H0YAP0;Q96GY0 H0YAP0 ZC2HC1A Zinc finger C2HC domain-containing protein 1A 1 SNS(0.044)PGT(0.956)ASSGSSR 166.79 2.7575999999999998e-05 62445000.0 225990.0 212490.0 162180.0 174030.0 154360.0 206890.0 209240.0 190050.0 215060.0 227360.0 True False 213453.88420010396 202281.66144600767 172634.38229717483 190569.75887597277 166507.25381174075 205598.7227680511 230392.02118561015 189390.76090800352 176010.52522141943 225345.76728340326 0.9472282828887413 0.8976501484121985 0.7660866426661717 0.8456771173176957 0.7388967444076063 0.9123700225062691 1.022393382236732 0.8404451665152363 0.7810686987524466 1.0 17.781780826302406 SNT(ph)LDIMDGR ddPTM_KYSE-520_SHP099_60min_R1 2 SNTLDIMDGR 10 0 O94915;H0Y9X0;A0A2C9F2R7;A0A286YEZ9 O94915 FRYL Protein furry homolog-like 1 S(0.365)NT(0.635)LDIMDGR;S(0.069)NT(0.931)LDIMDGR 154.86 0.0091555 389830000.0 1809310.0 1726400.0 1489740.0 1360890.0 1482890.0 1839350.0 1406590.0 1633800.0 1884350.0 1599180.0 True False 1708943.9675299353 1643461.1526207693 1585771.0240682773 1490228.5764335026 1599585.0065100556 1827869.9343777583 1548781.8441955037 1628132.7291317857 1542199.5405978882 1585012.509343213 1.0781895773416175 1.0368758245963472 1.0004785544092512 0.9401998833756926 1.0091939319601213 1.1532211409077011 0.9771417165895289 1.0272049712758675 0.9729888764328647 1.0 20.596062795869425 SNT(ph)LNEKPALPVIR ddPTM_KYSE-520_SHP099_60min_R1 3 SNTLNEKPALPVIR 14 1 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9;A0A087WZS7 Q9UMZ2-4 SYNRG Synergin gamma 1 S(0.003)NT(0.997)LNEKPALPVIR;SNT(1)LNEKPALPVIR;SNT(1)LNEKPALPVIR 214.54 2.2797e-13 2154440000.0 1496390.0 1482760.0 1356030.0 1228540.0 950600.0 1373910.0 1179090.0 1656740.0 1560500.0 2094800.0 True False 1413382.2637204882 1411525.9839318648 1443441.8635247126 1345300.0722259795 1025406.8118258659 1365334.918063963 1298283.9240094668 1650993.1556260232 1277152.5370037414 2076241.701729737 0.6807407165278425 0.6798466588720904 0.6952186069291293 0.6479496443526768 0.493876416686742 0.6575992173389492 0.6253048105756925 0.7951835059716625 0.6151271000576346 1.0 20.985542971396338 -9.466481057629963 0.5886030775300672 1.0440122844063304 0.6444665954392695 0.6764944019697895 0.07159462271021362 6.1584579736533405 1.772750516855155 0.6554694358642753 0.030865596197665657 3.4160084976688163e-10 9.466481057629963 -0.3995456889670609 SNT(ph)PILVDGK ddPTM_KYSE-520_SHP099_60min_R1 1 SNTPILVDGK 10 0 P06744-2;P06744;A0A2U3TZU2;A0A0J9YXP8;A0A2R8Y6C7;K7ERC6;A0A0J9YYH3;A0A0J9YX90;K7EP41;K7EPY4;K7EQ48 P06744-2 GPI Glucose-6-phosphate isomerase 1 S(0.001)NT(0.999)PILVDGK 156.24 0.00048707 535570000.0 1178900.0 1349100.0 904610.0 747860.0 942140.0 1318300.0 1000300.0 1218700.0 1266900.0 1350300.0 True False 1113504.0669211152 1284287.2109596157 962922.6080271746 818936.389547692 1016281.0579566808 1310072.000701445 1101420.0859872203 1214472.6141467197 1036862.8959500429 1338337.3925175034 0.8320054966308148 0.9596139345279626 0.7194916718390808 0.6119057825973293 0.7593608783843268 0.9788802196112227 0.822976397540066 0.9074487651146131 0.7747395400793767 1.0 20.352010432053696 -6.231031587428325 24.300088915389903 0.8864100157591098 0.7743413501494822 0.25221361001816534 0.10279079757382602 828.4432199027001 662042.1665766317 0.03623777617472385 0.0362326964189351 5.874466243724004e-07 6.231031587428325 -0.11206866560962758 SNT(ph)PILVDGKDVMPEVNK ddPTM_KYSE-520_SHP099_60min_R1 1 SNTPILVDGKDVMPEVNK 18 1 P06744-2;P06744;A0A2U3TZU2;A0A0J9YXP8;A0A2R8Y6C7;K7ERC6;A0A0J9YYH3;A0A0J9YX90;K7EP41;K7EPY4;K7EQ48 P06744-2 GPI Glucose-6-phosphate isomerase 1 S(0.047)NT(0.953)PILVDGKDVMPEVNK 133.68 3.0524e-05 691470000.0 1121700.0 1435000.0 1070200.0 730890.0 836850.0 1170300.0 836600.0 958950.0 1472000.0 1111900.0 True False 1059477.0649464878 1366060.4460210875 1139186.8043805426 800353.5658499091 902705.3339748322 1162995.723599258 921171.6924291785 955623.6262706127 1204721.9061002948 1102049.4310451108 0.9613698216256504 1.239563677942836 1.0336984642333267 0.7262410771274631 0.8191151036834765 1.0553026850132756 0.8358714831471763 0.8671331787398705 1.0931650361253 1.0 20.071757504961262 -5.009248197406201 24.88357127754188 0.9049172121120417 1.1095078530434481 0.2803520700655362 0.1230590399323249 463.6867580515739 1247625.7533043765 0.03219921543088634 0.06176015035272071 9.789303710689433e-06 5.009248197406201 0.20459064093140644 SNT(ph)PMGDKDDDDDDDADEK ddPTM_KYSE-520_SHP099_60min_R1 1 SNTPMGDKDDDDDDDADEK 19 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;A0A0A0MSW0;X6RE05 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 S(0.193)NT(0.807)PMGDKDDDDDDDADEK 124.99 8.0572e-06 771450000.0 1599300.0 1553000.0 1340000.0 1433900.0 1498400.0 1652000.0 1601400.0 1722000.0 1735800.0 1535900.0 True False 1510583.640874491 1478391.5488994743 1426378.544075805 1570177.4248822457 1616315.5552702274 1641689.2552217154 1763285.1401578865 1716026.7839178208 1420622.475957126 1522293.120912117 0.9923079991121487 0.9711608944364551 0.9369933585597217 1.0314553769654018 1.0617636860250506 1.0784317636790341 1.1583085517074225 1.1272643621286444 0.9332121760531423 1.0 20.537814749039512 -5.5054676024610645 3.1810754537789063 1.0717928375103725 0.9675635514088896 0.30642355836720314 0.06067121690336427 0.2796209631699117 5.798716758848551 0.01868550105107413 0.02723014827055375 3.1227153461357952e-06 5.5054676024610645 -0.10422928610148285 SNTACDGDKES(ph)EVEDVETDSGNSPEDLRK ddPTM_KYSE-520_SHP099_60min_R1 4 SNTACDGDKESEVEDVETDSGNSPEDLRK 29 2 Q7Z3K6-3;Q7Z3K6;Q7Z3K6-2;Q7Z3K6-4 Q7Z3K6-3 MIER3 Mesoderm induction early response protein 3 1 SNTACDGDKES(1)EVEDVETDSGNSPEDLRK;SNTACDGDKES(1)EVEDVETDSGNSPEDLRK;SNTACDGDKES(1)EVEDVETDSGNSPEDLRK;SNTACDGDKES(1)EVEDVETDSGNSPEDLRK 278.42 4.775400000000001e-42 4657920000.0 2777930.0 2401210.0 2317210.0 2447740.0 2596720.0 2513860.0 2472320.0 2602680.0 3016290.0 2592360.0 True False 2623832.6852338375 2285852.2673103088 2466581.064267086 2680372.4736601366 2801067.0906842602 2498170.0672709816 2722246.233117988 2593651.910550081 2468607.7704831925 2569393.70722556 1.0211874800873006 0.8896465578171667 0.9599856407099666 1.0431925890230391 1.0901665567278367 0.9722799819450456 1.059489725324142 1.0094412169128861 0.9607744284346377 1.0 21.292996540116615 -5.17922843919321 5.961858491378399 1.022286365194529 0.9488455373119528 0.26478579243111844 0.047085404342293254 0.2730471926583373 15.719504735129185 0.012634211311310472 0.022157393023675448 6.618682689637682e-06 5.17922843919321 -0.07344082788257633 SNTEPQS(ph)PPIASPK ddPTM_KYSE-520_SHP099_60min_R1 1 SNTEPQSPPIASPK 14 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 SNTEPQS(1)PPIASPK 154.47 8.0505e-05 0.0 156420.0 165960.0 124240.0 106310.0 128860.0 246330.0 206880.0 273820.0 311060.0 266490.0 True False 147743.07078446055 157987.03248896153 132248.70919102844 116413.67043673288 139000.54888689352 244792.56309852592 227793.44935422935 272870.1823300684 254579.34518448182 264129.10592608247 0.5593592961534766 0.5981432146034478 0.500697220502608 0.44074533182765435 0.5262598697691172 0.9267913213889879 0.862432213048032 1.033093953706231 0.963844345332115 1.0 18.01088376367949 -6.275770259042853 4.894884603915774 0.9570552419276248 0.5211536199766876 0.937651786309971 0.05576318727201581 0.04770736526607014 3.360308872677809 0.021399306798254338 0.019692461388877012 5.299437089721114e-07 6.275770259042853 -0.4359016219509372 SNVSSPATPTASSSSS(ph)TTPTRK ddPTM_KYSE-520_SHP099_60min_R1 1 SNVSSPATPTASSSSSTTPTRK 22 1 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPAT(0.001)PT(0.013)AS(0.05)S(0.05)S(0.05)S(0.05)S(0.257)T(0.257)T(0.257)PT(0.016)RK 66.793 0.012634000000000001 1002500000.0 110750.0 139690.0 102050.0 55909.0 84878.0 150570.0 94735.0 126510.0 143460.0 126270.0 True False 104606.4767253486 132979.08272103523 108628.30628577303 61222.574550346224 91557.41571024175 149630.23677889438 104311.73832450176 126071.16633765599 117411.28033230185 125151.34603657352 0.8358398054686443 1.062546164562818 0.8679755330320467 0.48918830271673536 0.7315735596122597 1.1955943065539805 0.8334847496887351 1.0073496636689283 0.938154355111692 1.0 16.933314282121838 -6.22620225254028 24.97290821030403 0.9852866156103703 0.7989488844778218 0.28262078108592026 0.15693887321800687 942.3214297347034 667833.0667432772 0.056046359176311386 0.05604413371503852 5.940154590027887e-07 6.22620225254028 -0.1863377311325486 SNVSSPATPTASSSSST(ph)TPTRK ddPTM_KYSE-520_SHP099_60min_R1 1 SNVSSPATPTASSSSSTTPTRK 22 1 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPTASSSSS(0.02)T(0.658)T(0.321)PTRK 274.88 3.7713e-36 2917800000.0 518470.0 873950.0 607040.0 506980.0 462670.0 709980.0 502310.0 827930.0 860210.0 630000.0 True False 489709.43555567885 831964.1301743049 646170.7696983406 555163.2267709043 499079.4967678024 705548.751466291 553088.3968731784 825058.1040703142 704017.548129439 624418.6901325827 0.7842645380324842 1.332381851026359 1.0348357278689708 0.8890880999302353 0.7992705930404372 1.129928944497933 0.8857652815544987 1.3213219224670065 1.1274767383723814 1.0 19.252154195221628 -7.251750718590892 24.987352454318792 1.168299504453864 0.990465784749882 0.16794443427065953 0.17089369708841756 1133.5421614952627 2923448.5606638645 0.08126080013561765 0.0461682818025394 5.600789899163837e-08 7.251750718590892 -0.17783371970398199 SNVSSPATPTASSSSSTT(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 1 SNVSSPATPTASSSSSTTPTR 21 0 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPTASSSSST(0.013)T(0.987)PTR 460.6 6.195999999999999e-142 325870000.0 233340.0 340480.0 218100.0 185830.0 189220.0 304050.0 228120.0 265590.0 297750.0 244530.0 True False 220396.16504824202 324122.8297291009 232159.07497233804 203491.22732817326 204110.53748547277 302152.31116837903 251180.5958366533 264668.73027917213 243686.10566668637 242363.6544414613 0.9093614533753239 1.3373409081326884 0.9578955867263176 0.8396111529062746 0.8421664459378422 1.2466898630683863 1.036378975286171 1.092031438827385 1.0054564750159125 1.0 17.886813838723914 -6.253285466073863 24.985939996125573 1.079380043926204 0.9885541417032652 0.0997240129593091 0.146370979859371 1815.5252934226785 5563299.474209784 0.05162544980203311 0.050712914173551726 5.581032273531897e-07 6.253285466073863 -0.09082590222293885 SNVSSPATPTASSSSSTT(ph)PTRK ddPTM_KYSE-520_SHP099_60min_R1 1 SNVSSPATPTASSSSSTTPTRK 22 1 Q12888;Q12888-2;A6NNK5;Q12888-3;H7BZY0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 SNVSSPATPTASSS(0.002)S(0.004)S(0.1)T(0.249)T(0.621)PT(0.024)RK 172.32 1.8155e-09 1462700000.0 493000.0 639320.0 465650.0 366390.0 399080.0 581020.0 428640.0 553230.0 609420.0 554140.0 True False 465652.30722886464 608606.1075611153 495666.54406634305 401211.5954408301 430485.3255454091 577393.6386615739 471971.11432326434 551310.974254852 498764.69022801664 549230.7507143965 0.8478263582714196 1.108106395662457 0.9024741302660471 0.7304973272508238 0.7837968376414967 1.0512769685793182 0.8593311895034303 1.0037875219800598 0.9081150128234126 1.0 19.06705287679947 -6.263314665499415 24.999862980067228 0.9581656693792172 0.8810656140564614 0.15264748640819004 0.10488909522063772 435.9656474932012 5811916.420911572 0.03877622330540641 0.03594747876803227 5.453625786764717e-07 6.263314665499415 -0.07710005532275577 SNVVS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 4 SNVVSPTK 8 0 X6RLN4;Q71RC2-2;Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4 X6RLN4 LARP4 La-related protein 4 1 SNVVS(0.996)PT(0.004)K;SNVVS(0.997)PT(0.003)K;SNVVS(0.983)PT(0.017)K;SNVVS(0.986)PT(0.014)K 121.01 0.00093731 2553690000.0 4238520.0 4305550.0 3245550.0 3418420.0 3298130.0 4593340.0 3654140.0 4862680.0 4509200.0 4909110.0 True False 4003400.8463198594 4098704.9152376945 3454763.3460636055 3743305.609014554 3557674.067207282 4564671.26124704 4023536.1321696863 4845812.498038044 3690442.9476816845 4865619.104629785 0.8227937206409153 0.8423809647034746 0.7100357162722197 0.769337987318548 0.7311863075804776 0.9381480882676607 0.826931998918939 0.99592927309643 0.758473458016908 1.0 22.214191955492414 -6.262685108222712 24.9966344565274 0.89883185951004 0.7749421521819837 0.4115300749336225 0.07686048080729607 116.60669356076068 2339790.6687982604 0.025066365428896818 0.02335243204900052 5.461537145685367e-07 6.262685108222712 -0.12388970732805626 SNVVS(ph)PTKNEDNGAPENSVEKPHEKPEAR ddPTM_KYSE-520_SHP099_60min_R1 1 SNVVSPTKNEDNGAPENSVEKPHEKPEAR 29 3 X6RLN4;Q71RC2-2;Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4 X6RLN4 LARP4 La-related protein 4 1 SNVVS(0.5)PT(0.5)KNEDNGAPENSVEKPHEKPEAR 240.71 3.514e-31 3342800000.0 3084800.0 2609900.0 2839000.0 3125900.0 2555800.0 2803100.0 2703400.0 2716700.0 3195700.0 2519000.0 True False 2913679.9946036576 2484516.486460232 3022006.4825606057 3422984.596163899 2756926.9194872133 2785604.813142848 2976686.054641457 2707276.4017825485 2615441.43704124 2496683.619752343 1.1670201108191187 0.9951266819728974 1.2104082626457782 1.3710125580522854 1.1042355938397534 1.1157219886030914 1.192256011571353 1.0843490061632621 1.0475662259924936 1.0 21.25158158356859 -7.643008907917662 1.5873306108622298 1.0033574175937656 1.1653391030447067 0.2905310724338016 0.09017782896328506 0.5328500839010348 2.4812124899927057 0.08899256898928182 0.027793824792607953 2.2750507661848197e-08 7.643008907917662 0.16198168545094105 SNVVSPT(ph)KNEDNGAPENSVEKPHEKPEAR ddPTM_KYSE-520_SHP099_60min_R1 6 SNVVSPTKNEDNGAPENSVEKPHEKPEAR 29 3 X6RLN4;Q71RC2-2;Q71RC2-6;Q71RC2-5;Q71RC2-3;Q71RC2;Q71RC2-4 X6RLN4 LARP4 La-related protein 4 1 SNVVS(0.084)PT(0.916)KNEDNGAPENSVEKPHEKPEAR;SNVVS(0.075)PT(0.925)KNEDNGAPENSVEKPHEKPEAR;SNVVS(0.043)PT(0.957)KNEDNGAPENSVEKPHEKPEAR;S(0.001)NVVS(0.138)PT(0.861)KNEDNGAPENSVEKPHEKPEAR;SNVVS(0.153)PT(0.847)KNEDNGAPENSVEKPHEKPEAR;SNVVS(0.032)PT(0.968)KNEDNGAPENSVEKPHEKPEAR 257.5 4.2338e-41 8755220000.0 2649520.0 2560150.0 2490040.0 2935750.0 2497000.0 2600490.0 2413970.0 2499410.0 3119370.0 2366850.0 True False 2502545.843912822 2437156.5511365063 2650551.9626048673 3214762.7973345784 2693499.69401345 2584259.377307214 2657997.6456768634 2490740.130076682 2552971.040918529 2345881.5503814337 1.0667826956164583 1.0389086144354696 1.1298745932734306 1.3703858137303937 1.1481823085123348 1.1016154574756856 1.1330485314762293 1.0617501679365247 1.0882778972806293 1.0 21.161698739130713 -7.668534852754565 0.9236199610900072 1.0093929742429093 1.1490368496977077 0.21426861181980528 0.08498776094196367 0.9240474902675678 1.6074129478719332 0.0883142416389747 0.03237090385676251 2.1451869545803124e-08 7.668534852754565 0.1396438754547984 SNYFLK ddPTM_KYSE-520_SHP099_60min_R1 1 SNYFLK 6 0 F8VWS0;Q8NHW5;P05388;P05388-2;F8VW21;F8VZS0;F8VU65;F8VS58;F8VQY6;F8VRK7;G3V210;F8VYN4 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 0 110.61 0.067748 1328500000.0 1420900.0 1353800.0 962040.0 840030.0 1355000.0 1242400.0 993880.0 1053500.0 1140400.0 993460.0 False True 1342079.8445060723 1288761.415904772 1024054.6377184247 919866.1986357701 1461630.791104614 1234645.720755119 1094351.0897340577 1049845.6543887479 933332.1071445483 984658.717300185 1.3629898572227064 1.3088407112653202 1.0400097208566421 0.9341979941618065 1.4844034439792793 1.2538818771039455 1.1114014130039247 1.0662025694215125 0.9478737056262824 1.0 19.90926424755823 -7.192415383483533 2.062758494850022 0.9869073132354614 1.2214318349568412 0.3209466585126234 0.1482684212302941 0.47321528342239094 3.820375400589821 0.10751310066301907 0.04726783990998598 6.420733087853848e-08 7.192415383483533 0.23452452172137972 SNYNFEKPFLWLAR ddPTM_KYSE-520_SHP099_60min_R1 4 SNYNFEKPFLWLAR 14 1 F5H018;B5MDF5;J3KQE5;P62826;B4DV51 F5H018 RAN GTP-binding nuclear protein Ran 0 ;;; 166.45 4.7348999999999996e-08 800760000.0 585327.0 831930.0 612890.0 711030.0 1485320.0 1089400.0 764920.0 410451.0 457457.0 353349.0 False True 552857.7444895537 791962.8340476106 652397.8700586729 778606.0774210357 1602206.2336852464 1082600.6505075877 842245.5784997941 409027.24128098396 374394.3403525286 350218.6027613623 1.5786075900321865 2.261338569120074 1.8628304290940663 2.22320022774911 4.574874724107628 3.091214007398882 2.4049138790999556 1.167919802249036 1.0690304210014783 1.0 18.417896192699327 -7.24177656968944 3.8919781404616245 1.0560947968588918 2.630552484800184 0.4395086637077934 0.7746363403507764 0.23416609725360316 8.08135992944631 0.4718903503861766 0.23785033419237836 5.7309079163058166e-08 7.24177656968944 1.5744576879412924 SNYNLPMHK ddPTM_KYSE-520_SHP099_60min_R1 1 SNYNLPMHK 9 0 P36578;H3BM89 P36578 RPL4 60S ribosomal protein L4 0 84.17 0.003917800000000001 0.0 236830.0 201990.0 136950.0 178680.0 223290.0 212170.0 180820.0 175150.0 227190.0 187000.0 False True 223692.5677910994 192286.097206829 145778.01612774734 195661.6934778993 240861.65265369 210845.7683295346 199099.05023313916 174542.44553031737 185938.02299383533 185343.3254837986 1.2069092167586741 1.0374589789241548 0.7865296241298434 1.0556716459422903 1.2995431695475024 1.1375956904796403 1.074217535017429 0.9417250126202933 1.0032086265231532 1.0 17.499840636721988 -7.214317001405218 8.984503829455752 0.9794236142820836 1.0812824608868883 0.12422265505527996 0.12589852622953449 1.0403553275709179 191.69979907950514 0.06630354851326457 0.03807433648361377 6.104962471584742e-08 7.214317001405218 0.10185884660480471 SPAAPYFLGSSFS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 2 SPAAPYFLGSSFSPVR 16 0 P30291 P30291 WEE1 Wee1-like protein kinase 1 SPAAPYFLGS(0.002)S(0.002)FS(0.996)PVR;SPAAPYFLGS(0.038)S(0.189)FS(0.773)PVR 104.94 0.00059198 1044780000.0 459380.0 411470.0 433270.0 349600.0 374050.0 452660.0 414770.0 405810.0 473620.0 433160.0 True False 433897.2756486734 391702.36357093847 461199.27745651064 382825.87888892763 403485.6069466281 449834.7810342984 456698.99936510925 404402.33982676564 387622.54698860174 429322.53939338075 1.0106557094853594 0.912373163832492 1.074248927410545 0.8916976020635874 0.9398192965054678 1.0477781615423705 1.0637666496858296 0.9419545975810482 0.9028702465430773 1.0 18.711702390566266 SPAEGSERLS(ph)LS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 3 SPAEGSERLSLSPLR 15 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 2 S(0.028)PAEGS(0.035)ERLS(0.938)LS(0.999)PLR;S(0.007)PAEGS(0.018)ERLS(0.976)LS(0.999)PLR;S(0.001)PAEGS(0.072)ERLS(0.927)LS(0.999)PLR 84.65299999999999 0.010641 1315570000.0 2269970.0 2174900.0 2100060.0 2233350.0 2111540.0 2037400.0 2205330.0 2377690.0 2738030.0 2379160.0 True False 2144050.2390269926 2070414.539408547 2235433.2278148024 2445606.912518838 2277706.1849808423 2024683.8308648416 2428266.278346691 2369442.348347017 2240872.772119419 2358082.4933584686 0.9092346196817553 0.8780076800705076 0.9479877120969654 1.037116775773062 0.9659145476869423 0.8586145041860735 1.0297630745259738 1.0048174120373412 0.9502944780052562 1.0 21.16918275866705 -4.9212622032600235 5.066275967687428 0.9761725717931252 0.8950860347189518 0.3247296411540872 0.04808564819131079 0.2450709924177578 11.138398695172626 0.01320252628164838 0.028505320865091683 1.1987753296311228e-05 4.9212622032600235 -0.08108653707417346 SPAGPAATPAQAQAAS(ph)TPR ddPTM_KYSE-520_SHP099_60min_R1 1 SPAGPAATPAQAQAASTPR 19 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SPAGPAAT(0.001)PAQAQAAS(0.5)T(0.5)PR 98.573 0.00063147 736320000.0 396830.0 539290.0 327750.0 306620.0 320900.0 501710.0 414990.0 462040.0 520450.0 577770.0 True False 374817.04883900733 513381.6989092073 348877.2894185411 335761.0726113356 346153.0043287609 498578.64179012465 456941.2391121022 460437.29108094657 425949.39947683254 572651.4072982583 0.6545291674168341 0.8964994975413008 0.6092315237022247 0.5863271587778683 0.6044742052794283 0.8706494656887244 0.7979396073920938 0.8040446338083189 0.7438197026118233 1.0 19.127297662282356 -6.2678314059835065 24.906921844713388 0.8282090322139072 0.6747357126691857 0.40867839285632235 0.10323085000152811 597.6414248364687 2328738.952630064 0.037175777963054046 0.033581673510807056 5.397201023127289e-07 6.2678314059835065 -0.15347331954472143 SPAGPAATPAQAQAAST(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 SPAGPAATPAQAQAASTPR 19 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 SPAGPAATPAQAQAAS(0.083)T(0.917)PR;SPAGPAATPAQAQAAS(0.244)T(0.756)PR;SPAGPAATPAQAQAAS(0.036)T(0.964)PR;SPAGPAATPAQAQAAS(0.002)T(0.998)PR;SPAGPAATPAQAQAAS(0.096)T(0.904)PR;SPAGPAATPAQAQAAS(0.032)T(0.968)PR;SPAGPAATPAQAQAAS(0.002)T(0.998)PR 329.73 4.8693e-54 7211760000.0 3584170.0 4759010.0 3224600.0 2727370.0 3054740.0 4630060.0 3285840.0 4087070.0 4099200.0 4935810.0 True False 3385348.945234238 4530380.01618036 3432462.8755424214 2986578.42478631 3295130.6589069474 4601162.078106446 3618004.7739080745 4072892.9080993063 3354888.6124227764 4892082.563402074 0.6920056849735552 0.926063687083364 0.7016363340269144 0.6104922364003134 0.6735639916541868 0.9405323844139468 0.7395633101073472 0.8325478679711645 0.6857792297948676 1.0 22.222017321677942 -6.2329194676244715 24.980569141930562 0.8229612693652832 0.7249710066175354 0.20817329351453273 0.11351179932056839 1447.432668352795 1267806.1615812806 0.03793748398185763 0.03793140951120766 5.848985333726572e-07 6.2329194676244715 -0.0979902627477478 SPAGSQQQFGYSPGQQQTHPQGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SPAGSQQQFGYSPGQQQTHPQGSPR 25 0 Q8TAP9 Q8TAP9 MPLKIP M-phase-specific PLK1-interacting protein 1 SPAGSQQQFGYSPGQQQTHPQGS(1)PR 179.85 4.1551000000000003e-11 436300000.0 105350.0 122340.0 115930.0 122800.0 98343.0 117740.0 106200.0 125460.0 106490.0 99049.0 True False 99506.0254899816 116462.60276391612 123403.03329455842 134470.87507883387 106082.03460487179 117005.14098656444 116935.732412119 125024.8085425842 87154.10039444323 98171.50291895584 1.013593787721957 1.1863178142445292 1.2570148120929974 1.3697546750388907 1.0805786959627823 1.1918442471351025 1.1911372336700776 1.2735346289421354 0.8877739242353468 1.0 16.58301668144199 -7.763962487650495 24.999945305357247 0.9438868731934409 1.1989325120338126 0.5209331041877339 0.09645976753298358 52.87785088195492 523881.83248723875 0.08060046659114227 0.024565005802310157 1.7220173084562866e-08 7.763962487650495 0.2550456388403717 SPALKS(ph)PLQSVVVR ddPTM_KYSE-520_SHP099_60min_R1 3 SPALKSPLQSVVVR 14 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 SPALKS(0.937)PLQS(0.063)VVVR;SPALKS(0.999)PLQS(0.001)VVVR;S(0.155)PALKS(0.783)PLQS(0.062)VVVR 185.02 1.9071e-10 13530190000.0 7769600.0 6788900.0 5931500.0 5399100.0 4768900.0 7977100.0 5456600.0 6214200.0 7271100.0 7113900.0 True False 7338604.79968639 6462751.053653353 6313853.980735558 5912228.840701387 5144185.298670702 7927311.959944998 6008206.379284071 6192644.390605179 5950851.529514845 7050876.380530445 1.0408074689765443 0.9165883366639245 0.895470809581909 0.8385097853972876 0.729580979872987 1.1243016516123656 0.8521219285413237 0.8782800968834032 0.8439875000428183 1.0 22.749371156093265 -4.247208855096918 2.621189593902792 0.8898648974303907 1.0747987769719918 0.15811369223117966 0.09955548603362888 0.9358137409383397 8.155412476929579 0.025528943551257996 0.3862927232865556 5.6596704627534765e-05 4.247208855096918 0.18493387954160112 SPALKSPLQS(ph)VVVR ddPTM_KYSE-520_SHP099_60min_R1 1 SPALKSPLQSVVVR 14 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 SPALKS(0.376)PLQS(0.624)VVVR 72.29 0.010791 1165600000.0 1445600.0 1414800.0 1219600.0 991130.0 1066400.0 1478300.0 1171000.0 1291400.0 1602000.0 1554700.0 True False 1365409.6862678432 1346830.8843419051 1298217.367428995 1085326.6972058988 1150319.6130139928 1469073.3813524581 1289376.1078586748 1286920.4348150254 1311117.1831336084 1540926.5675382959 0.8860965311599182 0.8740396283085261 0.842491391074501 0.7043338210072919 0.7465116360811946 0.9533701425496046 0.8367537655726938 0.8351601315245947 0.8508628579414923 1.0 20.555366681551572 -6.257249467695306 24.979474081516205 0.881272160703746 0.8100713289635367 0.2507334273866286 0.07104255575508779 666.1280313808178 3971338.3761574514 0.025470482459221164 0.02459865275925121 5.530323447899382e-07 6.257249467695306 -0.0712008317402093 SPAPEQFQS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 SPAPEQFQSR 10 0 Q9P0V3;Q9P0V3-2 Q9P0V3 SH3BP4 SH3 domain-binding protein 4 1 SPAPEQFQS(1)R;SPAPEQFQS(1)R 142.12 0.00022707 881110000.0 341210.0 251120.0 234380.0 220206.0 236750.0 229120.0 240500.0 266120.0 305760.0 273080.0 True False 322282.40111472865 239055.8182611953 249488.509821259 241134.31203265168 255380.87807676577 227689.97709225153 264812.08705381 265196.89183287503 250241.69158235437 270660.7236530249 1.1907246709643786 0.8832305442575197 0.9217758175400886 0.89090987705248 0.9435461290059683 0.8412375981974394 0.9783912622404994 0.9798129859907039 0.924558569876408 1.0 18.046126023599854 -4.255698098652819 24.958764795938876 0.926439436662242 1.190724787547888 0.7393282286300833 0.04654624208247579 308.6484138582466 1341730.8129287423 0.011464033816638177 0.09897779548175124 5.550113970258127e-05 4.255698098652819 0.26428535088564586 SPAPGAPTRS(ph)PSTPAK ddPTM_KYSE-520_SHP099_60min_R1 7 SPAPGAPTRSPSTPAK 16 1 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 SPAPGAPT(0.003)RS(0.822)PS(0.136)T(0.039)PAK;SPAPGAPT(0.036)RS(0.963)PS(0.001)TPAK;SPAPGAPT(0.076)RS(0.807)PS(0.112)T(0.005)PAK;S(0.091)PAPGAPT(0.223)RS(0.676)PS(0.009)T(0.001)PAK;SPAPGAPT(0.001)RS(0.998)PS(0.001)TPAK;SPAPGAPT(0.05)RS(0.688)PS(0.232)T(0.03)PAK;SPAPGAPTRS(0.697)PS(0.238)T(0.065)PAK 211.33 1.3815999999999998e-17 16235070000.0 8934500.0 9332460.0 7868110.0 5789110.0 6365780.0 8297100.0 6516850.0 7345410.0 9607900.0 8465390.0 True False 8438885.474515807 8884114.613291949 8375300.960021117 6339305.273840611 6866730.669666378 8245314.721247035 7175636.796326905 7319930.487141576 7863347.55544906 8390393.230573766 1.0057794959794424 1.058843652395112 0.9982012439539002 0.7555432861884003 0.8184039151639149 0.9827089737822919 0.8552205598874187 0.8724180483542142 0.9371846276281541 1.0 23.000306996020793 -5.0231665111435255 23.412992637354186 0.8825743672795787 1.0313643370771193 0.42987379845410456 0.0702237994700102 280.1080361664917 283089.54082215764 0.019015664128705635 0.033281596830793826 9.480549035985774e-06 5.0231665111435255 0.14878996979754056 SPAPGAPTRSPS(ph)TPAK ddPTM_KYSE-520_SHP099_60min_R1 1 SPAPGAPTRSPSTPAK 16 1 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 SPAPGAPT(0.006)RS(0.069)PS(0.856)T(0.069)PAK 197.1 3.5378e-12 1039800000.0 398330.0 400800.0 326550.0 249140.0 248510.0 362750.0 301450.0 319930.0 414570.0 346970.0 True False 376233.84084883146 381544.96638693445 347599.9354984737 272818.1906933278 268066.32317151874 360485.9426947201 331923.5078684862 318820.23750222346 339294.5384592381 343896.11573857494 1.0940334119238475 1.1094773942633875 1.0107701703810879 0.7933157084586567 0.7794979672736375 1.0482408093517304 0.9651853937216607 0.927082984980808 0.9866192810306851 1.0 18.391613295342683 -4.984549515342154 5.392569827333295 0.9239347648011305 1.0951784271207412 0.4240598240420438 0.08072698681696966 0.16736027138912596 15.179508119127185 0.02325192805831862 0.04753113333220896 1.0362164552499944e-05 4.984549515342154 0.17124366231961075 SPAPPPPAVFPAARPEPGDGLS(ph)SPAGGSYETGDRDDGR ddPTM_KYSE-520_SHP099_60min_R1 2 SPAPPPPAVFPAARPEPGDGLSSPAGGSYETGDRDDGR 38 2 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 SPAPPPPAVFPAARPEPGDGLS(0.489)S(0.489)PAGGS(0.01)YET(0.012)GDRDDGR;SPAPPPPAVFPAARPEPGDGLS(0.454)S(0.454)PAGGS(0.05)YET(0.041)GDRDDGR 72.766 0.006261600000000001 1369520000.0 240532.0 242415.0 220622.0 216670.0 205071.0 243120.0 217766.0 245509.0 255315.0 224163.0 True False 227189.21047134575 230769.01952766694 234843.64712768074 237262.25165578915 221208.92100561954 241602.59789921506 239779.91247135156 244657.38658123114 208956.23196738889 222177.09021617475 1.0225591227713635 1.0386715358596712 1.057011084712567 1.0678970159566712 0.995642353540533 1.0874325416006647 1.0792287910425398 1.1011818830788693 0.9404940525779585 1.0 17.761350535378384 -7.767845858026357 24.99998952264671 0.9702470104179717 1.0558252112509283 0.5285242525008593 0.032472239880873 130.27656034517 508354.372333143 0.02914494132149207 0.008255295532459617 1.7066880277851392e-08 7.767845858026357 0.08557820083295664 SPAPPPPAVFPAARPEPGDGLSS(ph)PAGGSYETGDRDDGR ddPTM_KYSE-520_SHP099_60min_R1 1 SPAPPPPAVFPAARPEPGDGLSSPAGGSYETGDRDDGR 38 2 Q14814-4;Q14814;Q14814-6;Q14814-3;Q14814-5;Q14814-2 Q14814-4 MEF2D Myocyte-specific enhancer factor 2D 1 SPAPPPPAVFPAARPEPGDGLS(0.217)S(0.763)PAGGS(0.014)YET(0.006)GDRDDGR 116.35 5.8461e-05 697700000.0 136270.0 130200.0 126880.0 140990.0 141050.0 139450.0 107660.0 135460.0 160160.0 135070.0 True False 128710.83145248974 123944.99656581566 135058.88781517785 154389.64720981085 152149.83253528122 138579.64082364884 118543.32346034584 134990.12087660175 131078.98130504272 133873.38488287 0.9614370441525988 0.9258374745231025 1.008855404181683 1.1532512406770856 1.1365203970034958 1.0351545301173677 0.8854883557628955 1.0083417327104174 0.97912651883515 1.0 17.03050964410493 -9.750425961889228 12.943722613265372 1.0000122851320201 1.0128084479079542 0.0007594662558020326 0.07944280935075188 0.0 0.0 0.08654426413539427 0.020990067195387353 1.7765361046618052e-10 9.750425961889228 0.012796162775934095 SPASS(ph)AS(ph)GY(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SPASSASGYPK 11 0 P15529-14;P15529-6;P15529-13;P15529-5 P15529-14 3 S(0.253)PAS(0.326)S(0.421)AS(1)GY(1)PK 71.558 0.037263 0.0 267160.0 272900.0 223540.0 229910.0 234840.0 238130.0 243180.0 258210.0 299410.0 259370.0 True False 252340.1022297439 259789.47436874904 237949.74607664597 251760.57727503777 253320.5719431791 236643.7423401618 267763.0076080895 257314.32977666712 245044.6915118813 257072.18358680667 0.9815924022154467 1.0105701470459747 0.9256145210136921 0.9793380744751977 0.9854063882319622 0.9205342213162993 1.0415868565479112 1.0009419385111291 0.9532135608485078 1.0 17.9718139866992 -6.767840490920008 24.999984090539424 0.9990140658725734 0.9686407456482599 0.18797767717879732 0.03225160026613358 288.95053071933125 1128503.9295759057 0.013312715974531649 0.009215675866321913 1.7067091195400003e-07 6.767840490920008 -0.030373320224313494 SPAVATSTAAPPPPS(ph)SPLPSK ddPTM_KYSE-520_SHP099_60min_R1 1 SPAVATSTAAPPPPSSPLPSK 21 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 SPAVATSTAAPPPPS(0.5)S(0.5)PLPSK 193.45 1.8381e-13 1017700000.0 1010900.0 1454300.0 991830.0 933480.0 942090.0 1490000.0 1114200.0 1513500.0 1604900.0 1522100.0 True False 954823.3618208112 1384433.245051196 1055764.9487841092 1022197.658539003 1016227.123241143 1480700.357312565 1226834.2095440973 1508250.021753554 1313490.6162366604 1508615.3781758824 0.6329137138820102 0.9176846962312958 0.6998238013857914 0.6775734049423363 0.6736157790396499 0.9814962638806782 0.8132186820390919 0.9997578200331153 0.8706597024251775 1.0 20.524793606648558 -6.261120380928564 24.999996372707372 0.9255233722806473 0.7277731131096078 0.5811649250374702 0.09006207353034239 22.936050740802955 1797552.932610111 0.03016892373383118 0.028404476163000198 5.481250105528593e-07 6.261120380928564 -0.1977502591710395 SPAVATSTAAPPPPSS(ph)PLPSK ddPTM_KYSE-520_SHP099_60min_R1 7 SPAVATSTAAPPPPSSPLPSK 21 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 SPAVATSTAAPPPPS(0.045)S(0.955)PLPSK;SPAVATSTAAPPPPS(0.004)S(0.996)PLPSK;SPAVATSTAAPPPPS(0.238)S(0.762)PLPSK;SPAVATSTAAPPPPS(0.274)S(0.726)PLPSK;SPAVATSTAAPPPPS(0.002)S(0.998)PLPSK;SPAVATSTAAPPPPS(0.006)S(0.994)PLPSK;SPAVATSTAAPPPPS(0.183)S(0.817)PLPSK 357.92 3.8762999999999994e-78 45274630000.0 19223600.0 28159200.0 18338600.0 16807860.0 17260400.0 27600100.0 21088400.0 29079900.0 31346100.0 30028700.0 True False 18157228.586703453 26806389.76417907 19520735.498797435 18405273.960932616 18618695.28175799 27427837.538162727 23220221.274950396 28979028.614199683 25654438.410876676 29762669.079975065 0.6100672133239559 0.9006715658514296 0.6558798690515087 0.6184013238690365 0.6255720960955424 0.9215516748333817 0.7801793989831859 0.9736703565238163 0.8619669943559434 1.0 24.827000575596223 -6.268199401157069 24.953061312346847 0.8978721983880124 0.689262718855861 0.5757281327729966 0.0964545648387806 431.0020458574061 1590940.1459015838 0.03397081405723826 0.03062069842191668 5.392629694736511e-07 6.268199401157069 -0.20860947953215137 SPCETIS(ph)SPSSTLESK ddPTM_KYSE-520_SHP099_60min_R1 1 SPCETISSPSSTLESK 16 0 Q9C0D5 Q9C0D5 TANC1 Protein TANC1 1 SPCET(0.001)IS(0.718)S(0.115)PS(0.118)S(0.034)T(0.014)LESK 115.58 0.00018458 1384700000.0 2748600.0 2714600.0 1955400.0 1806200.0 1894500.0 2547500.0 2103500.0 2561900.0 2909900.0 2714800.0 True False 2596129.6788017424 2584186.5413023266 2081448.2127506188 1977860.7049461661 2043586.3717695142 2531600.107552858 2316142.3081816584 2553013.3668519547 2381535.512609544 2690748.9840824385 0.9648353280664856 0.9603967358492006 0.7735571861454795 0.7350595379377718 0.7594860701829418 0.9408533172469631 0.8607797761452939 0.9488114208923683 0.8850827508243628 1.0 21.359576379733703 -6.289334962602889 24.83868142152618 0.9197608184271858 0.836056540850195 0.23005995221421482 0.08026366329331416 1251.6375519639628 1114474.1485692307 0.031384971080988124 0.027684794655399057 5.136473329041919e-07 6.289334962602889 -0.08370427757699084 SPCGSPT(ph)GSPK ddPTM_KYSE-520_SHP099_60min_R1 1 SPCGSPTGSPK 11 0 Q13191;A0A2R8Y8D8;A0A2R8Y5E1;A0A2R8YFD4;Q13191-3;Q13191-2 Q13191 CBLB E3 ubiquitin-protein ligase CBL-B 1 S(0.001)PCGS(0.099)PT(0.555)GS(0.345)PK 109.51 0.057662 0.0 230830.0 216270.0 173360.0 174390.0 200460.0 220610.0 225590.0 224750.0 274350.0 253100.0 True False 218025.39975180305 205880.06457211176 184535.06298580722 190963.97316773454 216235.06153862088 219233.09115887573 248394.83874623262 223970.39470704438 224534.9558006899 250857.73090882052 0.8691197156329574 0.820704483877131 0.7356164082217596 0.7612441222197946 0.8619828488252412 0.8739339639429353 0.9901821157607333 0.892818387121787 0.8950689101238096 1.0 17.936509874057673 -6.223885285191589 2.0573762229124175 0.933743930892805 0.7959904829118634 0.6247785263154492 0.04934388754484767 0.23071307266648627 1.9186998438421057 0.020134076090318098 0.018982136752400253 5.97193008676797e-07 6.223885285191589 -0.1377534479809417 SPDKPGGS(ph)PSASR ddPTM_KYSE-520_SHP099_60min_R1 3 SPDKPGGSPSASR 13 1 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 S(0.002)PDKPGGS(0.971)PS(0.024)AS(0.003)R;S(0.002)PDKPGGS(0.73)PS(0.116)AS(0.153)R;SPDKPGGS(0.771)PS(0.13)AS(0.099)R 85.988 0.005128199999999999 1098110000.0 1302430.0 1158230.0 1092360.0 1136090.0 1162450.0 1171190.0 1073600.0 1181950.0 1320670.0 1147490.0 True False 1230181.6115701625 1102586.8922613251 1162775.2734377962 1244063.6520220872 1253928.2015642524 1163880.1687791285 1182129.9653262806 1177850.0913192027 1080869.619381437 1137324.13133371 1.0816455728654601 0.9694570456078785 1.022378090293609 1.0938514516202225 1.1025249240898494 1.0233495770588081 1.0393958351521373 1.035632726739007 0.9503619852978322 1.0 20.117212042574934 -7.664264038395042 6.052519314916306 0.9759453090179313 1.0458123751652655 0.350543059357148 0.0387326222613673 0.23827082551154793 12.042956401488807 0.028990400590239423 0.010489356419431184 2.166386604405499e-08 7.664264038395042 0.06986706614733418 SPDKPGGS(ph)PSASRR ddPTM_KYSE-520_SHP099_60min_R1 1 SPDKPGGSPSASRR 14 2 Q9Y3T9 Q9Y3T9 NOC2L Nucleolar complex protein 2 homolog 1 SPDKPGGS(0.931)PS(0.038)AS(0.031)RR 49.993 0.0654 679330000.0 304130.0 274100.0 278450.0 254100.0 268190.0 287890.0 202270.0 210960.0 320950.0 236290.0 True False 287259.3026318759 260931.82456751209 296399.3325357521 278249.5876020493 289295.0272076359 286093.1717226268 222717.4255649655 210228.22899843412 262673.57049109356 234196.65443083842 1.2265730410624105 1.114156925946049 1.2656001993541843 1.1881023163130637 1.2352654136358248 1.2215937602435485 0.9509846590517248 0.8976568410396207 1.1215940344214643 1.0 17.83736094109356 -6.75853793974117 24.99990080303702 0.9840302653697179 1.2071363792322052 0.7288775382355022 0.06444746710243211 37.43092107337255 322522.8948534182 0.02472579930807371 0.018296124217479406 1.7436610254873596e-07 6.75853793974117 0.22310611386248724 SPEALKCRLT(ph)EGS(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 1 SPEALKCRLTEGSER 15 2 A0A3B3IS53;A0A3F2YNX6;Q92794;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 2 SPEALKCRLT(1)EGS(1)ER 77.42 0.01622 327370000.0 337890.0 334130.0 269060.0 241690.0 282670.0 346100.0 283110.0 340730.0 367990.0 323580.0 True False 319146.56813298434 318077.8932606448 286404.038111221 264660.14493325166 304914.52082770574 343939.86152072373 311729.5216873356 339548.0871569797 301172.29227299377 320713.3329414309 0.9951147500040708 0.9917825690107265 0.8930219254823574 0.8252233934458355 0.9507385241242515 1.0724214623890753 0.9719880331394395 1.0587276931794676 0.9390700708036801 1.0 18.290924806291343 -6.013650031873238 24.760656604503094 1.0100276461887718 0.9235121499609807 0.3161417754585607 0.057641427920135574 704.9694775799416 1278789.5646496757 0.019492998171489386 0.02032701345929742 9.690584394206832e-07 6.013650031873238 -0.08651549622779109 SPFIEEQLHTVLEKS(ph)PENS(ph)PPVKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SPFIEEQLHTVLEKSPENSPPVKPK 25 2 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 2 S(0.01)PFIEEQLHT(0.005)VLEKS(0.985)PENS(1)PPVKPK;SPFIEEQLHTVLEKS(1)PENS(1)PPVKPK 175.28 3.2632e-10 6781200000.0 2799940.0 2530180.0 2462490.0 2622050.0 2597920.0 1998600.0 1997240.0 2288700.0 2805710.0 2030880.0 True False 2644621.746657987 2408626.35492239 2621226.0455233073 2871248.843651925 2802361.523857197 1986125.9960569723 2199140.510383996 2280761.0338865947 2296263.790193381 2012887.9832007326 1.3138444705962833 1.196602282404402 1.3022215182363226 1.4264325027596896 1.3922093764011183 0.9867046813498258 1.0925300010421344 1.133078965606378 1.140780713759365 1.0 20.940835458137133 -6.257898237681355 24.99996347100325 1.0803057512054728 1.323288156970036 0.7517897968254432 0.07333010984340346 180.8981055450417 1277118.0321379637 0.02710817915835039 0.026082770892100343 5.522068152345762e-07 6.257898237681355 0.24298240576456331 SPFIEEQLHTVLEKS(ph)PENSPPVKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SPFIEEQLHTVLEKSPENSPPVKPK 25 2 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.001)PFIEEQLHT(0.171)VLEKS(0.825)PENS(0.004)PPVKPK;SPFIEEQLHTVLEKS(0.999)PENS(0.001)PPVKPK 159.54 2.781e-10 2892880000.0 579610.0 552130.0 492319.0 591270.0 557020.0 495650.0 532630.0 558040.0 718720.0 475610.0 True False 547457.8778761108 525604.846035974 524054.67047825136 647464.1230281922 600854.3049897363 492556.4644979674 586473.438367862 556104.2894875145 588218.5654567963 471396.46541898063 1.1613533788156987 1.1149953056368647 1.1117068304966347 1.373502286345574 1.2746262415346976 1.0448879035615586 1.24411929530825 1.1796955010963965 1.2478213321646003 1.0 18.846581415584023 -10.411583800160624 8.126763729774833 0.9999967918503347 1.1941663996723766 0.2973599186034591 0.08980373226564616 5.414538464800604e-06 3.9194827428429544e-07 0.09019256811695477 0.021874549469565775 3.876289455750391e-11 10.411583800160624 0.19416960782204185 SPGAGSLGS(ph)PASQR ddPTM_KYSE-520_SHP099_60min_R1 2 SPGAGSLGSPASQR 14 0 E9PC47;P53667-4;P53667-2;P53667 E9PC47 LIMK1 LIM domain kinase 1 1 SPGAGS(0.001)LGS(0.999)PASQR;SPGAGSLGS(1)PASQR 217.77 6.8449e-14 336660000.0 347490.0 317410.0 297280.0 222150.0 217540.0 312840.0 247060.0 258200.0 337960.0 300310.0 True False 328214.03699585836 302161.1471578769 316443.1444648176 243263.06920816703 234659.16036671418 310887.449517894 272035.23587324045 257304.36446433284 276594.9832782984 297649.4870376447 1.1026863854609903 1.0151576277356782 1.0631402311968237 0.8172803240121181 0.7883741467259309 1.0444750051881495 0.9139449174956423 0.8644542512911864 0.9292641019848844 1.0 18.183254882497163 -5.2409133284656875 24.285056831044358 0.9035261076446808 1.0558110747920972 0.46300081649585334 0.07488220065863677 523.8312098855426 619760.5385151736 0.02080549395070247 0.03597523774207143 5.742310492497134e-06 5.2409133284656875 0.15228496714741646 SPGALET(ph)PSAAGSQGNTASQGK ddPTM_KYSE-520_SHP099_60min_R1 3 SPGALETPSAAGSQGNTASQGK 22 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 S(0.144)PGALET(0.821)PS(0.034)AAGSQGNTASQGK;S(0.038)PGALET(0.962)PSAAGSQGNTASQGK;SPGALET(0.999)PS(0.001)AAGSQGNTASQGK 397.79 8.628899999999998e-93 4875250000.0 1628560.0 1916560.0 1362460.0 1175770.0 1173330.0 1786570.0 1419550.0 1707230.0 1937470.0 1966990.0 True False 1538220.5303461258 1824485.580784792 1450286.3516130762 1287514.8272918598 1265664.3956655187 1775419.3539355055 1563051.9674729162 1701308.0176004765 1585674.2876441127 1949563.9988950628 0.7890074556249138 0.9358428765707818 0.7439029200554802 0.6604116756472592 0.6492038201273967 0.9106750816806959 0.8017443737978304 0.8726607685434855 0.8133481581229502 1.0 20.894720084599875 -8.355195189975325 0.5839345529117959 1.0026312987398869 0.7754474534846006 0.3478001240814411 0.0879232002660109 1.7566778623984867 1.1895264791613267 0.1168893897972186 0.04311685813610541 4.4137203184838595e-09 8.355195189975325 -0.22718384525528623 SPGAS(ph)NFSTLPK ddPTM_KYSE-520_SHP099_60min_R1 1 SPGASNFSTLPK 12 0 Q9Y4E8 Q9Y4E8 USP15 Ubiquitin carboxyl-terminal hydrolase 15 1 S(0.3)PGAS(0.7)NFSTLPK 235.81 3.2411e-15 11522000000.0 2398500.0 1927600.0 1853900.0 1668900.0 1823900.0 2122800.0 1919900.0 2030800.0 2469500.0 1938800.0 True False 2265450.4237087867 1834995.2026134105 1973405.3603448777 1827511.7542269162 1967430.5534285654 2109550.8177873213 2113982.228418337 2023755.6287922836 2021101.0510289895 1921623.7403635774 1.1789250809735292 0.9549190947579694 1.0269468048784114 0.9510247588225285 1.023837555762254 1.0977959802828974 1.100102056409006 1.0531487440977298 1.0517673197806094 1.0 20.87389444911339 -6.132125306148459 7.819632160092786 1.066233912858038 1.0184063006744346 0.052237790465512135 0.06428485638431261 0.6421671919289655 37.8144846138241 0.020674641630933615 0.02069799760287094 7.376913547578414e-07 6.132125306148459 -0.04782761218360343 SPGDPAKPAS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 SPGDPAKPASSPR 13 1 Q8NCD3;C9JWC4;Q8NCD3-3;Q8NCD3-2;H7C3V8 Q8NCD3 HJURP Holliday junction recognition protein 1 S(0.024)PGDPAKPAS(0.488)S(0.488)PR;S(0.001)PGDPAKPAS(0.685)S(0.313)PR 133.87 2.6504000000000002e-05 1921510000.0 2450030.0 2027790.0 2056540.0 2204740.0 2076910.0 2216030.0 1946570.0 2219830.0 2629750.0 2275380.0 True False 2314121.9518862823 1930371.9246251583 2189107.8589803395 2414277.826720748 2240351.0009985864 2202198.934775408 2143348.2922924524 2212129.927842215 2152253.6906027505 2255221.9034188516 1.0261171853546385 0.8559565343431482 0.9706840181277572 1.07052783722115 0.9934060136620164 0.9764888020273915 0.9503935240444402 0.9808923567515417 0.9543423143150551 1.0 21.10483796431761 -3.927719545059964 22.314416068888466 0.9730158946256192 3.203864379924155 0.09265465515504367 0.050294515921741036 3630.2252272126902 1084171.8834537014 0.012666602373565575 13248.509003033823 0.00011810830990808158 3.927719545059964 2.230848485298536 SPGLVPPS(ph)PEFAPR ddPTM_KYSE-520_SHP099_60min_R1 2 SPGLVPPSPEFAPR 14 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 SPGLVPPS(1)PEFAPR;SPGLVPPS(1)PEFAPR 128.96 4.322e-05 1056670000.0 2198460.0 2220360.0 1889290.0 1525600.0 1562880.0 1890740.0 1498710.0 1904120.0 2470800.0 1958410.0 True False 2076507.0412786424 2113690.5727716913 2011076.656370878 1670592.5653116342 1685869.764429211 1878939.190325607 1650214.2328000655 1897515.0521449505 2022165.0037993253 1941060.011019926 1.0697799292601706 1.088936231116861 1.0360713450142955 0.8606599259307932 0.8685304703914714 0.9679964450652518 0.8501613672072734 0.9775664025698542 1.0417838667114587 1.0 20.888413291323452 -5.073510836327659 5.562715454465651 0.9321538218084938 1.0759815612909436 0.48986354923120623 0.06010477565099833 0.1738935287589871 9.674849840311383 0.01698514885225034 0.030455966479232762 8.442851754084669e-06 5.073510836327659 0.14382773948244976 SPGS(ph)NSKVPEIEVTVEGPNNNNPQTSAVR ddPTM_KYSE-520_SHP099_60min_R1 1 SPGSNSKVPEIEVTVEGPNNNNPQTSAVR 29 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347 A0A494C1K3 GTF2I General transcription factor II-I 1 S(0.091)PGS(0.454)NS(0.454)KVPEIEVTVEGPNNNNPQTSAVR 152.87 4.2961000000000005e-07 281720000.0 44773.0 77113.0 56435.0 41049.0 45581.0 40915.0 20326.0 25017.0 77851.0 36264.0 True False 42289.352437237256 73408.37573102726 60072.89039919265 44950.28461816814 49167.96537958632 40659.634308351364 22380.750442643424 24930.221866011703 63715.22086400405 35942.7291729651 1.1765759977137706 2.042370666338898 1.671350278107914 1.2506085556791335 1.3679530328088942 1.1312339169540349 0.6226781036838311 0.6936095961450632 1.772687337051981 1.0 15.13341233805825 -5.762333148967707 1.3793670538502307 1.0056516391308916 1.656022067454192 0.30435983026918 0.36089961792253716 0.47365783171149367 1.8841448062029753 0.14070227945820293 0.19695048041716617 1.7284899192553512e-06 5.762333148967707 0.6503704283233003 SPGS(ph)PPGPELPIETALDDR ddPTM_KYSE-520_SHP099_60min_R1 8 SPGSPPGPELPIETALDDR 19 0 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10;F5GZI3;B1AP52 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 S(0.006)PGS(0.994)PPGPELPIETALDDR;SPGS(1)PPGPELPIETALDDR;S(0.001)PGS(0.999)PPGPELPIETALDDR;SPGS(1)PPGPELPIETALDDR;S(0.002)PGS(0.998)PPGPELPIETALDDR;S(0.002)PGS(0.998)PPGPELPIETALDDR;S(0.004)PGS(0.996)PPGPELPIETALDDR;SPGS(1)PPGPELPIETALDDR 278.64 6.025699999999999e-36 2146032000.0 773194.0 854308.0 695117.0 629962.0 683001.0 881747.0 690600.0 831383.0 998355.0 865287.0 True False 730303.3874959745 813265.7613375493 739925.3540465231 689833.3990750177 736749.292955899 876243.6899055577 760412.5876064907 828499.1264192513 817078.8984814932 857621.2303631002 0.8515453694946175 0.9482808173874478 0.8627647355852572 0.8043567190879307 0.859061397820077 1.0217140841237957 0.8866531758834221 0.9660431634469693 0.9527269959671566 1.0 19.70998109450541 -6.236386671276184 24.53202624162053 0.9583817899237984 0.8663016195089801 0.5325587142324999 0.04671098625160423 547.4835438399841 536105.0998770463 0.015758948030304084 0.01575190247678938 5.80247567808636e-07 6.236386671276184 -0.09208017041481831 SPGS(ph)PPGPELPIETALDDRER ddPTM_KYSE-520_SHP099_60min_R1 2 SPGSPPGPELPIETALDDRER 21 1 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10;F5GZI3;B1AP52 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 SPGS(1)PPGPELPIETALDDRER;S(0.008)PGS(0.992)PPGPELPIETALDDRER 164.06 3.1496999999999996e-09 695520000.0 220454.0 249810.0 260150.0 166212.0 185910.0 195975.0 158055.0 192777.0 307040.0 196451.0 True False 208224.97715584608 237808.7526275453 276919.6852547169 182008.7385065401 200540.0593167964 194751.84733176464 174032.7418681495 192108.30158148988 251289.2758485287 194710.59697656505 1.069407522698457 1.221344684471218 1.422211680076387 0.9347654484796546 1.0299391118447085 1.0002118547004637 0.8938021071811294 0.986635060261315 1.2905783236788768 1.0 17.570971878215136 -5.279769574882816 24.9933482210897 1.0132659908383934 1.2360236587928888 0.38207731788842403 0.12700870330876246 817.4441758215503 1114588.8519584658 0.03631317605008548 0.05397070317739197 5.250859830310929e-06 5.279769574882816 0.22275766795449536 SPGS(ph)PVCR ddPTM_KYSE-520_SHP099_60min_R1 2 SPGSPVCR 8 0 Q86VQ1;H7C2L5;H7C0Q2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 S(0.064)PGS(0.936)PVCR;S(0.061)PGS(0.939)PVCR 83.309 0.0072382 570280000.0 888610.0 1030610.0 1138400.0 708530.0 763400.0 863670.0 714410.0 718920.0 886160.0 893680.0 True False 839317.0318998826 981097.9486228515 1211783.0855044017 775868.4781726871 823475.2368481646 858279.5151678792 786629.5347696983 716426.2343171895 725255.682275704 885762.690472518 0.9475642188678567 1.1076306997074759 1.36806742769665 0.8759326696846909 0.9296792986492516 0.9689723042071486 0.8880815857688291 0.808824126397789 0.8187923131971272 1.0 19.75656070466537 -5.307982483805737 24.92333568651164 0.8944334338813006 1.137741999469629 0.5037021139065305 0.11022699056957944 319.6292975441832 171157.3832748188 0.031879763050533 0.0472855374575257 4.920593812799097e-06 5.307982483805737 0.24330856558832836 SPGS(ph)PVGEGT(ph)GSPPKWQIGEQEFEALMR ddPTM_KYSE-520_SHP099_60min_R1 2 SPGSPVGEGTGSPPKWQIGEQEFEALMR 28 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 2 S(0.06)PGS(0.939)PVGEGT(0.546)GS(0.454)PPKWQIGEQEFEALMR;S(0.005)PGS(0.995)PVGEGT(0.571)GS(0.429)PPKWQIGEQEFEALMR 90.322 0.006505400000000001 118521000.0 171906.0 160121.0 139447.0 142586.0 152443.0 154391.0 132116.0 163810.0 197785.0 157138.0 True False 162370.0314938848 152428.54681347916 148435.97674308866 156137.33056995593 164439.39681797868 153427.3885005665 145471.57460790512 163241.78134354137 161872.22975410792 155745.879571514 1.0425317956442577 0.9787003497802866 0.953065192809362 1.002513395535849 1.0558186018813607 0.9851136281914739 0.9340316097486789 1.0481290535110783 1.0393355522434922 1.0 17.248834470107425 SPGS(ph)PVGEGTGS(ph)PPKWQIGEQEFEALMR ddPTM_KYSE-520_SHP099_60min_R1 6 SPGSPVGEGTGSPPKWQIGEQEFEALMR 28 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 2 S(0.004)PGS(0.996)PVGEGT(0.038)GS(0.962)PPKWQIGEQEFEALMR;S(0.125)PGS(0.875)PVGEGT(0.178)GS(0.822)PPKWQIGEQEFEALMR;S(0.151)PGS(0.849)PVGEGT(0.067)GS(0.933)PPKWQIGEQEFEALMR;S(0.179)PGS(0.821)PVGEGT(0.22)GS(0.78)PPKWQIGEQEFEALMR;S(0.101)PGS(0.899)PVGEGT(0.204)GS(0.796)PPKWQIGEQEFEALMR;S(0.162)PGS(0.838)PVGEGT(0.214)GS(0.786)PPKWQIGEQEFEALMR 152.23 4.864100000000001e-07 1739177000.0 809486.0 734397.0 669008.0 706198.0 709177.0 700965.0 642299.0 717511.0 876204.0 706816.0 True False 764582.197909665 699115.4657676286 712133.3261306477 773314.8455938282 764985.1952348332 696590.0174252352 707228.8511541578 715022.1218093267 717107.4409053688 700554.1601345274 1.0913962708648284 0.997946348121575 1.0165285807365654 1.1038616135622243 1.091971525924467 0.9943414186441618 1.009527730187697 1.020652167238606 1.0236288380154115 1.0 19.418137064760334 -6.276410536886625 24.8234162751306 1.0109143969215353 1.056858310634672 0.37983108322545467 0.03222486433258278 988.4370593308332 1638907.9980430456 0.012317373630254603 0.01089780631009417 5.291629916707844e-07 6.276410536886625 0.045943913713136775 SPGS(ph)PVGEGTGSPPK ddPTM_KYSE-520_SHP099_60min_R1 8 SPGSPVGEGTGSPPK 15 0 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 SPGS(1)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK;SPGS(1)PVGEGTGSPPK 363.25 1.5707999999999997e-67 30011600000.0 11512530.0 11903800.0 8816410.0 7531310.0 8149470.0 11958350.0 9014330.0 11533910.0 12162920.0 11662310.0 True False 10873907.011240425 11331923.580031915 9384729.89535476 8247083.438029077 8790786.924858553 11883713.50192529 9925586.447782831 11493901.558244843 9954440.330261806 11558991.006539874 0.9407315054651534 0.980355774446101 0.8118987107131622 0.713477796925616 0.7605150760896761 1.0280926332758364 0.8586896937775199 0.9943689333906217 0.8611859222513244 1.0 23.462512133555954 -6.259487148584816 24.999894150482785 0.9425043842113133 0.8403704954302791 0.2627250285623486 0.08939582107523791 295.37547842187473 3782536.008739835 0.03287544603862685 0.03129511067728938 5.501902012105287e-07 6.259487148584816 -0.10213388878103424 SPGS(ph)PVGEGTGSPPKWQIGEQEFEALMR ddPTM_KYSE-520_SHP099_60min_R1 4 SPGSPVGEGTGSPPKWQIGEQEFEALMR 28 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.001)PGS(0.998)PVGEGTGSPPKWQIGEQEFEALMR;S(0.013)PGS(0.987)PVGEGTGSPPKWQIGEQEFEALMR;SPGS(1)PVGEGTGSPPKWQIGEQEFEALMR;SPGS(1)PVGEGTGSPPKWQIGEQEFEALMR 248.01 2.1723999999999997e-31 1360040000.0 262810.0 317891.0 319869.0 186108.0 198751.0 218197.0 140152.0 172009.0 360108.0 197875.0 True False 248231.40540125396 302619.03919588076 340488.2675484952 203795.64836458972 214391.5729615009 216835.15158693245 154319.93191170724 171412.3409262023 294721.4647839432 196121.98144442038 1.2656990489951838 1.5430143881227354 1.7361045663562564 1.0391270109737496 1.093154226683448 1.105613710354961 0.7868568876122662 0.8740088166750415 1.5027457025130313 1.0 17.58139171697153 -5.278774521214255 24.30071811328539 1.044339649924428 1.517746822604202 0.5075621011440508 0.20625792083513247 432.6188511906016 606452.0384563277 0.05877371886139109 0.08743132848732192 5.262904370937301e-06 5.278774521214255 0.47340717267977395 SPGS(ph)TPT(ph)TPTSSQAPQK ddPTM_KYSE-520_SHP099_60min_R1 1 SPGSTPTTPTSSQAPQK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 2 SPGS(0.972)T(0.028)PT(0.593)T(0.407)PTSSQAPQK 184.0 8.494999999999999e-12 2616200000.0 3054000.0 3143900.0 2812100.0 3245000.0 3111300.0 3565600.0 3965600.0 4089700.0 4431400.0 3967300.0 True False 2884588.5320019354 2992862.324909891 2993372.465519085 3553403.824355178 3356141.6091245706 3543345.7678078366 4366481.548526362 4075513.785243158 3626769.4665032886 3932152.8085126905 0.7335901406875922 0.761125640496642 0.7612553761997127 0.903678976224535 0.8535125089388396 0.9011210754925068 1.1104557124721592 1.0364586484075864 0.9223368579806259 1.0 21.906887957075863 -5.799948570630158 0.8350204556797594 1.0174335461923658 0.734373652317675 0.7578244070317393 0.05859842653641102 0.3228321412093235 0.4904396102007938 0.03333488605159057 0.05319835364476433 1.5850808874191971e-06 5.799948570630158 -0.28305989387469077 SPGS(ph)TPTT(ph)PTSSQAPQK ddPTM_KYSE-520_SHP099_60min_R1 6 SPGSTPTTPTSSQAPQK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 2 SPGS(0.998)T(0.002)PT(0.009)T(0.968)PT(0.013)S(0.009)S(0.002)QAPQK;SPGS(0.998)T(0.002)PT(0.002)T(0.929)PT(0.068)SSQAPQK;SPGS(1)TPTT(0.942)PT(0.057)SSQAPQK;SPGS(0.998)T(0.002)PT(0.057)T(0.929)PT(0.013)S(0.001)SQAPQK;SPGS(1)TPTT(0.96)PT(0.039)SSQAPQK;SPGS(0.998)T(0.002)PT(0.053)T(0.845)PT(0.084)S(0.017)S(0.001)QAPQK 385.05 1.6133999999999996e-78 7207660000.0 6191110.0 5579190.0 5543980.0 5733330.0 6153850.0 6683010.0 7141540.0 7486130.0 8466500.0 7527130.0 True False 5847676.78662819 5311157.337865078 5901353.821481632 6278223.959411486 6638122.984383125 6641298.855653303 7863476.557913796 7460162.362305872 6929197.023096557 7460445.484218526 0.7838240757871752 0.7119088731497402 0.7910189591178003 0.8415347277440931 0.8897756840962241 0.8902013786846902 1.054022387074314 0.9999620502672055 0.9287913218794043 1.0 22.830830349762305 -5.852352792617222 0.9231413390166829 0.9942534772688055 0.7440815765662159 0.8392937355399444 0.04160831761285767 0.21736303017138597 0.40298552043722397 0.02165947092124188 0.031176886421922703 1.4049058062758852e-06 5.852352792617222 -0.25017190070258966 SPGS(ph)TPTTPT(ph)SSQAPQK ddPTM_KYSE-520_SHP099_60min_R1 1 SPGSTPTTPTSSQAPQK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 2 SPGS(0.997)T(0.003)PTT(0.373)PT(0.394)S(0.221)S(0.012)QAPQK 284.46 2.045e-37 1388600000.0 1178600.0 1015800.0 998740.0 1066200.0 1210400.0 1402900.0 1418500.0 1428800.0 1590100.0 1401100.0 True False 1113220.7085191493 966999.4432531142 1063120.378440501 1167531.32743528 1305651.593766072 1394143.9807206693 1561895.8232259005 1423843.8262844274 1301377.9231590186 1388687.3440393056 0.8016352372601738 0.696340646729293 0.7655577643187697 0.8407445581229651 0.9402055828983754 1.003929348607363 1.124728204609959 1.0253163409287374 0.9371280934797547 1.0 20.405290389681678 -5.739785510383635 1.6123584398737294 1.0267992940072512 0.746168290809571 0.8452692430217219 0.049896625094623344 0.13746067250643665 0.7408245361604127 0.01886099963859589 0.02593975442389621 1.820599795515033e-06 5.739785510383635 -0.2806310031976802 SPGS(ph)TPTTPTSSQAPQK ddPTM_KYSE-520_SHP099_60min_R1 8 SPGSTPTTPTSSQAPQK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 1 S(0.021)PGS(0.949)T(0.03)PTTPTSSQAPQK;S(0.001)PGS(0.994)T(0.005)PTTPTSSQAPQK;SPGS(1)TPTTPTSSQAPQK;SPGS(0.994)T(0.006)PTTPTSSQAPQK;S(0.161)PGS(0.805)T(0.031)PT(0.002)TPTSSQAPQK;SPGS(0.974)T(0.026)PTTPTSSQAPQK;SPGS(0.991)T(0.009)PTTPTSSQAPQK;SPGS(0.995)T(0.005)PTTPTSSQAPQK 334.46 1.0758e-58 12125230000.0 5252190.0 6209050.0 4231010.0 3720470.0 3869950.0 5420300.0 3639420.0 4508160.0 4904890.0 5029070.0 True False 4960840.550718814 5910757.918025946 4503747.674455359 4074062.350199904 4174493.047996539 5386469.897141797 4007328.0909163277 4492522.245172451 4014285.6182148615 4984516.352357255 0.9952501306115197 1.1858237590555114 0.9035475773543137 0.817343561983344 0.837492096103237 1.0806404305594164 0.8039552501460246 0.9012955174774113 0.8053510781073961 1.0 22.249022096032647 -4.831124896129144 8.325867952617367 0.8883173534836474 1.0898741617982743 0.4083618412581297 0.09464328993974795 0.21461630891557118 22.763786113859375 0.02398491997100509 0.05036987482931609 1.4752822047576352e-05 4.831124896129144 0.20155680831462697 SPGSTPTT(ph)PTSSQAPQK ddPTM_KYSE-520_SHP099_60min_R1 2 SPGSTPTTPTSSQAPQK 17 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 1 SPGSTPT(0.002)T(0.878)PT(0.005)S(0.098)S(0.016)QAPQK;SPGSTPT(0.024)T(0.763)PT(0.181)S(0.032)SQAPQK 307.89 1.7024999999999998e-46 912410000.0 1196840.0 1691340.0 1103510.0 1076220.0 1124620.0 2187760.0 1658610.0 2301040.0 2313200.0 2144230.0 True False 1130448.8993586095 1610085.4876469027 1174644.0202784266 1178503.625222657 1213121.1957875062 2174105.378331635 1826278.4852736809 2293058.2293067737 1893181.191026632 2125233.7903856947 0.53191743161276 0.757603937473015 0.5527128476840415 0.5545289325598283 0.5708177619213107 1.0229958643453863 0.8593306268399965 1.0789675186232672 0.8908107896604877 1.0 21.019190125716797 -6.258881975133188 24.99943922905587 0.9684132913455868 0.5981993461681068 0.8379620918366398 0.08285493420378837 86.88963473755408 849376.1787506897 0.02709997523607427 0.025924056970867602 5.509574055129676e-07 6.258881975133188 -0.3702139451774801 SPGTS(ph)PLLSR ddPTM_KYSE-520_SHP099_60min_R1 3 SPGTSPLLSR 10 0 Q9BRS8 Q9BRS8 LARP6 La-related protein 6 1 S(0.001)PGT(0.313)S(0.686)PLLSR;SPGT(0.318)S(0.682)PLLSR;SPGT(0.176)S(0.823)PLLSR 133.85 0.00030107 1029400000.0 1241660.0 1324630.0 1200250.0 907700.0 1006460.0 1351630.0 1037150.0 1184190.0 1391560.0 1329590.0 True False 1172782.6446121545 1260992.786489834 1277620.0354679 993967.5350900432 1085662.6760259406 1343193.975808308 1141995.2436085606 1180082.321282023 1138887.78237291 1317810.8670053664 0.8899476199321542 0.9568844953869234 0.9695018211309813 0.7542565932460137 0.8238380052920898 1.0192615719284688 0.866585086070557 0.8954868644873738 0.8642270381036949 1.0 20.329711898082056 -10.267959136754259 5.74397062845785 1.00000659577946 0.8942876984534235 0.16586387401291336 0.07173368406420053 6.2860536768429315e-06 8.011867705889419e-07 0.07205209352158126 0.01747410937978781 5.395613880515839e-11 10.267959136754259 -0.10571889732603645 SPGVVIS(ph)DDEPGYDLDLFCIPNHYAEDLER ddPTM_KYSE-520_SHP099_60min_R1 1 SPGVVISDDEPGYDLDLFCIPNHYAEDLER 30 0 P00492 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase 1 S(0.16)PGVVIS(0.84)DDEPGYDLDLFCIPNHYAEDLER 119.35 0.00015833 97372000.0 13780.0 17806.0 16170.0 18091.0 14341.0 14371.0 14057.0 13541.0 18549.0 17165.0 True False 13015.595930251033 16950.573032649107 17212.34407291476 19810.363200742526 15469.555110871795 14281.30525834822 15478.018743099406 13494.029431493153 15180.969182238003 17012.931454167927 0.7650413431285763 0.9963346456966096 1.011721238005575 1.1644297312377208 0.9092821629562243 0.8394382412473368 0.9097796452537585 0.7931630987784476 0.8923194232066856 1.0 14.054344129016883 -5.984227296400979 24.971311886111465 0.8753202075007679 0.9933967939919738 0.16100266372378413 0.10334489665292243 369.4973392829391 584984.1960430966 0.032384135661099815 0.036709620476605594 1.0369855473652721e-06 5.984227296400979 0.11807658649120589 SPITS(ph)SPPK ddPTM_KYSE-520_SHP099_60min_R1 1 SPITSSPPK 9 0 G3V5T8;Q52LA3 G3V5T8;Q52LA3 LIN52 Protein lin-52 homolog 1 S(0.004)PIT(0.089)S(0.454)S(0.454)PPK 80.916 0.016219 287210000.0 906880.0 971790.0 805300.0 652690.0 709530.0 936790.0 751850.0 969820.0 982020.0 1024000.0 True False 856573.5585795402 925103.7497134715 857210.9265255564 714721.4613615959 765365.9743265368 930943.1461253937 827854.3353488853 966455.9207776905 803709.9227096548 1014928.1566599461 0.8439745739230063 0.9114967829426666 0.8446025670886642 0.7042089202783492 0.7541085241395804 0.9172502900984234 0.8156777698170213 0.9522407221001985 0.7918884873138262 1.0 19.952946176834352 -9.13698622932371 0.4494297825929504 1.0235696926375975 0.8250238098929836 0.3118725254660554 0.07241345603019085 6.751553205754445 1.6017875178757661 0.36653268085581175 0.044468852764189236 7.294806403723047e-10 9.13698622932371 -0.19854588274461382 SPITSS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 3 SPITSSPPK 9 0 G3V5T8;Q52LA3 G3V5T8;Q52LA3 LIN52 Protein lin-52 homolog 1 SPIT(0.001)S(0.019)S(0.98)PPK;SPIT(0.018)S(0.399)S(0.583)PPK;SPIT(0.014)S(0.057)S(0.929)PPK 123.51 0.00070084 2504460000.0 4655250.0 5059040.0 3679110.0 3122310.0 3294900.0 4808310.0 3844760.0 4686750.0 4702950.0 4961190.0 True False 4397014.0024892 4815996.124626141 3916271.317384135 3419053.4036432696 3554189.8845834634 4778299.553737963 4233425.862041612 4670492.758145671 3849012.831721724 4917237.7163474085 0.8942040747534497 0.9794108811569779 0.796437256707043 0.695319933847532 0.7228021278628693 0.971744672390447 0.8609357745645575 0.9498204129156842 0.7827591533607661 1.0 22.229416671056967 -6.2742205954693135 24.797653690428966 0.9066585083016963 0.8186494892037975 0.2027141751104249 0.09417877763849472 1416.3494981711385 2747941.660629062 0.035810888527283265 0.031785088989136796 5.318380489142439e-07 6.2742205954693135 -0.08800901909789871 SPLDPDS(ph)GLLSCTLPNGFGGQSGPEGER ddPTM_KYSE-520_SHP099_60min_R1 1 SPLDPDSGLLSCTLPNGFGGQSGPEGER 28 0 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 S(0.068)PLDPDS(0.932)GLLSCTLPNGFGGQSGPEGER 152.28 2.6013999999999998e-11 52859000.0 25408.0 26496.0 22763.0 18935.0 24893.0 32995.0 25944.0 28348.0 34885.0 33547.0 True False 23998.56759040771 25223.092388693167 24230.339402087746 20734.576706984655 26851.937478204556 32789.0659661262 28566.67270903969 28249.667404472955 28550.763379285854 33249.79967917107 0.7217657797030675 0.7585938150627074 0.7287364025012922 0.6236000489342369 0.8075819324417051 0.9861432634935997 0.8591532275286138 0.8496191759666334 0.8586747485631059 1.0 15.021058028351636 -5.998115361867838 9.382757361618118 0.8980286689601841 0.7133975473797727 0.7268190523520411 0.05829149638914792 0.05879477302422996 81.83303027866896 0.018474833759003044 0.020239152928681448 1.0043489691059438e-06 5.998115361867838 -0.1846311215804114 SPLELGEKLS(ph)PLPGGPGAGDPR ddPTM_KYSE-520_SHP099_60min_R1 3 SPLELGEKLSPLPGGPGAGDPR 22 1 Q15742;Q15742-2;Q15742-3 Q15742 NAB2 NGFI-A-binding protein 2 1 S(0.005)PLELGEKLS(0.995)PLPGGPGAGDPR;SPLELGEKLS(1)PLPGGPGAGDPR;SPLELGEKLS(1)PLPGGPGAGDPR 128.06 3.4065e-05 4117000000.0 2916850.0 3198920.0 2190105.0 1846795.0 2140980.0 3018240.0 2513243.0 3012110.0 3716700.0 3218850.0 True False 2755046.5159036852 3045239.081523187 2331282.6725918995 2022313.8415408363 2309462.945490156 2999402.044600717 2767306.129327979 3001661.693441759 3041840.970382444 3190333.4932274064 0.8635606659154068 0.9545206129665651 0.7307332219471283 0.6338879135469384 0.7238938971091251 0.9401531378985902 0.8674034031873312 0.9408614177213231 0.9534554857164026 1.0 21.605275809576916 -6.273162881335628 24.19915579445705 0.9321178377139018 0.7799405943539267 0.46026223996074944 0.08588174803999406 548.8079898378231 1132822.1927965407 0.03424218446239075 0.030460652313321575 5.331349067346034e-07 6.273162881335628 -0.15217724335997507 SPLIES(ph)TANMDNNQSQK ddPTM_KYSE-520_SHP099_60min_R1 1 SPLIESTANMDNNQSQK 17 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 S(0.499)PLIES(0.499)T(0.002)ANMDNNQSQK 250.27 1.1093e-23 335490000.0 219650.0 196930.0 152450.0 179420.0 195030.0 206500.0 175360.0 232480.0 201770.0 225000.0 True False 207465.57663858045 187469.18720204363 162277.17092862437 196472.02285541015 210377.75143109448 205211.15690271443 193087.10014867436 231673.58114123985 165133.65420778267 223006.6750473512 0.9303110617407713 0.8406438379579362 0.7276785365019586 0.8810140898862919 0.943369750642777 0.9202018587970148 0.8658355186349288 1.038863886437697 0.7404874951510744 1.0 17.766727368051388 -5.516076046800987 23.67304559567315 0.9170709562917875 0.8287697298739547 0.1590783553977414 0.08768695910840078 264.3929509584671 920075.522715145 0.024390078108769888 0.03280498807195147 3.047361337045496e-06 5.516076046800987 -0.08830122641783278 SPLLAGGS(ph)PPQPVVPAHK ddPTM_KYSE-520_SHP099_60min_R1 2 SPLLAGGSPPQPVVPAHK 18 0 Q8NFH5-2;Q8NFH5;C9IYQ7;F8WCF5;F8WEL4;C9JIY9 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 SPLLAGGS(1)PPQPVVPAHK;SPLLAGGS(1)PPQPVVPAHK 162.81 1.777e-08 2452800000.0 2877700.0 3000600.0 2774200.0 2312320.0 2393510.0 2971400.0 2496980.0 2876600.0 3375500.0 3033900.0 True False 2718068.2444472704 2856446.6720075756 2953029.37087694 2532082.1975756395 2581865.6197909997 2952854.3904151334 2749399.106576396 2866621.7460034895 2762594.289430397 3007022.006338483 0.9039070012516939 0.9499254298726412 0.9820444827647644 0.8420564240096278 0.8586121466183823 0.9819862921491196 0.9143262339886289 0.9533092009173711 0.9187143571304571 1.0 21.51990399537351 -6.2791657252960835 24.98351853420104 0.9482902260109104 0.9102034820000561 0.20634897151012477 0.04466217481706371 1762.9651094122491 2484716.739853935 0.01667167580245807 0.01472858093917869 5.258165782856439e-07 6.2791657252960835 -0.03808674401085432 SPLS(ph)PTETFSWPDVR ddPTM_KYSE-520_SHP099_60min_R1 5 SPLSPTETFSWPDVR 15 0 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 S(0.114)PLS(0.87)PT(0.008)ET(0.008)FS(0.001)WPDVR;SPLS(0.998)PT(0.002)ETFSWPDVR;SPLS(0.997)PT(0.001)ET(0.002)FSWPDVR;SPLS(0.974)PT(0.025)ETFSWPDVR;SPLS(0.918)PT(0.082)ETFSWPDVR 246.85 5.7200999999999995e-19 2586092000.0 7519780.0 8362980.0 7967310.0 7418520.0 7522830.0 6781130.0 5675130.0 6314390.0 10441600.0 5982910.0 True False 7102642.813090211 7961209.887711106 8480895.55074673 8123573.910340641 8114833.92195243 6738806.4523375435 6248827.524331354 6292486.854879707 8545668.651315777 5929906.0720335385 1.1977664952548746 1.3425524436647567 1.4301905372066681 1.3699329823541082 1.3684590992466792 1.13641031923236 1.0537818724991115 1.0611444394635798 1.4411136614150815 1.0 22.499577822411705 -6.264801379233425 23.972534483172826 1.1370173067133327 1.3482989304792576 0.40067428567242447 0.12418022113935744 171.82755752303106 1225198.9498155243 0.042663861568807616 0.039197583110751326 5.434988390818292e-07 6.264801379233425 0.21128162376592496 SPLT(ph)PEKEVGYLEFTGPPQKPPR ddPTM_KYSE-520_SHP099_60min_R1 1 SPLTPEKEVGYLEFTGPPQKPPR 23 2 Q14289;Q14289-2 Q14289 PTK2B Protein-tyrosine kinase 2-beta 1 S(0.493)PLT(0.507)PEKEVGYLEFTGPPQKPPR 172.18 1.057e-10 1035600000.0 835920.0 1037800.0 639700.0 773270.0 738260.0 1067700.0 754170.0 1067900.0 1148500.0 1083700.0 True False 789549.8512347924 987942.5302304423 680936.0855561885 846761.3483078976 796356.8618751984 1061036.0882567933 830408.8635899046 1064195.7041497326 939961.3513289323 1074099.261105843 0.735080899713038 0.9197869936278538 0.6339601098460195 0.7883455272430886 0.7414183127314568 0.9878380208216507 0.7731211571032589 0.9907796631887503 0.875115909083851 1.0 20.034695893083246 -6.249813242399792 24.684973796079007 0.9152790678899488 0.7665482241203915 0.43798742229533927 0.09117197690107702 644.5862869133704 1368605.8166518786 0.02889333666566261 0.02865669337829703 5.625831981704518e-07 6.249813242399792 -0.14873084376955736 SPLTAAS(ph)PGELPTEGAGPDVVEDISHLLADVAR ddPTM_KYSE-520_SHP099_60min_R1 1 SPLTAASPGELPTEGAGPDVVEDISHLLADVAR 33 0 K7ES98;K7EM85;Q92619;Q92619-2;K7EQA4 K7ES98 HMHA1 Minor histocompatibility protein HA-1;Minor histocompatibility antigen HA-1 1 S(0.316)PLT(0.316)AAS(0.367)PGELPTEGAGPDVVEDISHLLADVAR 72.943 0.011084 280910000.0 9930.9 0.0 0.0 0.0 7171.6 7796.9 0.0 0.0 6712.1 0.0 True False 9380.013180241656 0.0 0.0 0.0 7735.9641191777555 7748.236654986796 0.0 0.0 5493.35183827159 0.0 0.0 SPLVS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 SPLVSPSK 8 0 P35612 P35612 ADD2 Beta-adducin 1 S(0.001)PLVS(0.983)PS(0.016)K 62.78 0.031603 3232700000.0 1083200.0 979340.0 891350.0 712510.0 806680.0 1123500.0 900720.0 951770.0 1081200.0 1099900.0 True False 1023112.7366943343 932291.0363806915 948807.8472104261 780226.7361760569 870161.1266186505 1116487.8197588362 991773.567780074 948468.532014788 884881.334833994 1090155.7417092517 0.9385014430050143 0.8551906857995861 0.8703415584664934 0.7157020839542999 0.7981989117025864 1.0241544185313363 0.9097540193890786 0.870030304594541 0.8117017605636709 1.0 20.056102825189836 -6.204573988123145 24.99997610642077 0.9141699680371479 0.8319465651892622 0.23767273379343956 0.07742806389987812 482.33863601565116 212052.15863937078 0.02689288808534161 0.02689288088931312 6.24346975003038e-07 6.204573988123145 -0.08222340284788565 SPMFPALGEAS(ph)S(ph)DDDLFQSAKPKPAK ddPTM_KYSE-520_SHP099_60min_R1 2 SPMFPALGEASSDDDLFQSAKPKPAK 26 2 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 2 SPMFPALGEAS(1)S(1)DDDLFQSAKPKPAK;SPMFPALGEAS(1)S(1)DDDLFQSAKPKPAK 168.69 1.8548e-10 1606250000.0 1290390.0 1131420.0 1046660.0 1058700.0 1070170.0 1179170.0 1085340.0 974150.0 1256790.0 1083950.0 True False 1218809.49437131 1077064.8849039574 1114129.3783152115 1159318.5296902393 1154386.2905656293 1171810.3626390975 1195056.759097639 970770.9010183198 1028588.6170976834 1074347.04630034 1.1344653467131 1.002529758529124 1.037029312038291 1.0790912803106876 1.0745003623744445 1.090718652482348 1.1123563500388254 0.9035915390294982 0.9574081491076538 1.0 20.035028671679257 -7.260298716049786 24.999954028761685 0.9478748805542466 1.072151637698944 0.6502516547380783 0.04092376077452424 62.144377573914255 1362053.8019359072 0.020546984938360092 0.011016398328173563 5.491630190983249e-08 7.260298716049786 0.12427675714469733 SPMFPALGEAS(ph)SDDDLFQSAKPKPAK ddPTM_KYSE-520_SHP099_60min_R1 2 SPMFPALGEASSDDDLFQSAKPKPAK 26 2 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 SPMFPALGEAS(0.545)S(0.454)DDDLFQS(0.001)AKPKPAK;SPMFPALGEAS(0.5)S(0.5)DDDLFQSAKPKPAK 92.822 0.0016122 732710000.0 472620.0 440980.0 468720.0 429780.0 464240.0 463720.0 389570.0 412120.0 545960.0 402480.0 True False 446402.82645538764 419794.65887552506 498934.44117851637 470626.1619819313 500773.0468357241 460825.75147180015 428951.53743680986 410690.45190953143 446827.4265316014 398914.3403247016 1.119044319369497 1.0523428627154081 1.250730772858158 1.1797674698755098 1.2553397965791684 1.1551997631789945 1.0752973610516459 1.0295204017364843 1.120108708470847 1.0 18.605719461345128 -6.770844341054404 3.9240988924213305 1.0559978173823181 1.1727460617566257 0.44565622910064306 0.06195487641520794 0.22310114330289282 7.578363432284347 0.027808026342387077 0.019352911577654112 1.6949451904016323e-07 6.770844341054404 0.11674824437430753 SPMFPALGEAS(ph)SDDDLFQSAKPKPAKK ddPTM_KYSE-520_SHP099_60min_R1 1 SPMFPALGEASSDDDLFQSAKPKPAKK 27 3 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 SPMFPALGEAS(0.498)S(0.498)DDDLFQS(0.004)AKPKPAKK 51.645 0.043627 125440000.0 232510.0 223950.0 217070.0 192960.0 198560.0 192020.0 152380.0 159490.0 277190.0 159550.0 True False 219612.20680280615 213191.10584419686 231062.67952427975 211298.86038446063 214185.5423481422 190821.53195379744 167784.05748548682 158936.7664152457 226859.28339126383 158136.51112802172 1.3887508029376965 1.3481460057734858 1.4611595884850372 1.3361801071569142 1.3544344744949202 1.2066886425698053 1.061007709659503 1.0050605346071921 1.4345787811620971 1.0 17.2708109752263 -6.333607261740119 2.6586693767022456 1.1256788532259068 1.3830604037769558 0.5076825291133804 0.11846171521973974 0.23678150709452478 3.285624569136698 0.04453386132048119 0.039357105527273104 4.638662104888601e-07 6.333607261740119 0.25738155055104905 SPMFPALGEASS(ph)DDDLFQSAK ddPTM_KYSE-520_SHP099_60min_R1 1 SPMFPALGEASSDDDLFQSAK 21 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 SPMFPALGEAS(0.12)S(0.88)DDDLFQSAK 120.31 5.94e-05 52341000.0 56818.0 47253.0 40145.0 45185.0 45346.0 58117.0 44976.0 51121.0 52977.0 53314.0 True False 53666.19227612505 44982.894951800976 42732.81093427107 49479.368814634414 48914.47221655345 57754.27024559344 49522.61300346011 50943.67318273109 43357.71224149135 52841.67943766433 1.0156034563480023 0.8512767843585646 0.8086951699686536 0.9363701029412524 0.925679742527039 1.0929681051058253 0.937188475659264 0.9640812654871754 0.8205210868182015 1.0 15.689388699235748 -5.603337206293194 3.2758692936017852 0.960937396728378 0.8864918571923222 0.10686115724683343 0.0805701584509561 0.5004712645860702 10.76400216732276 0.02517993416022097 0.03413383367185313 2.492658560148594e-06 5.603337206293194 -0.07444553953605582 SPMFPALGEASS(ph)DDDLFQSAKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SPMFPALGEASSDDDLFQSAKPK 23 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 SPMFPALGEAS(0.209)S(0.791)DDDLFQSAKPK;SPMFPALGEAS(0.176)S(0.824)DDDLFQSAKPK 280.35 8.0747e-39 1759286000.0 865890.0 832250.0 681370.0 786820.0 825780.0 872620.0 848860.0 947110.0 862120.0 898750.0 True False 817857.3555910802 792267.4607672817 725292.200430546 861599.1362339413 890764.1879545152 867173.654898047 934671.0528752477 943824.6964671352 705580.7402766211 890787.7742169185 0.9181281773989874 0.8894009142230933 0.8142143633124536 0.9672327811092416 0.9999735220182787 0.9734907460538169 1.0492634496436668 1.059539346840319 0.7920862417503306 1.0 19.76472223216101 -5.406879553158447 6.411092089925402 0.985096834049934 0.8759955199373372 0.2952567809575699 0.07300488856194155 0.2891770980282907 14.24744519563419 0.020466733794094555 0.030455031935780398 3.918505375153338e-06 5.406879553158447 -0.10910131411259683 SPMFPALGEASS(ph)DDDLFQSAKPKPAK ddPTM_KYSE-520_SHP099_60min_R1 1 SPMFPALGEASSDDDLFQSAKPKPAK 26 2 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 SPMFPALGEAS(0.099)S(0.901)DDDLFQSAKPKPAK 220.38 7.2033e-22 3013800000.0 924170.0 795330.0 713690.0 754430.0 712740.0 720870.0 731270.0 739280.0 850070.0 710800.0 True False 872904.4478127796 757121.1529853313 759695.599344374 826130.8003723497 768828.5830641346 716370.7829368502 805193.9081074416 736715.61022925 695718.7165208402 704502.8649940322 1.2390360510743614 1.0746885365636445 1.0783428103600534 1.1726436348549807 1.0913065386478553 1.016845805081174 1.1429249590266213 1.0457240798239915 0.9875314226390457 1.0 19.426246047975667 -1.0000000019950275 0.13779940351743605 0.9676718180237976 1.6809786182803395 0.49476746758885937 0.05407052530625883 73.1922917447404 0.6756254976894428 0.24927541305488965 10.25263561665688 0.09999999954062795 1.0000000019950275 0.7133068002565418 SPMFPALGEASS(ph)DDDLFQSAKPKPAKK ddPTM_KYSE-520_SHP099_60min_R1 1 SPMFPALGEASSDDDLFQSAKPKPAKK 27 3 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q5SRD0;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21D;FAM21A WASH complex subunit FAM21C;Putative WASH complex subunit FAM21;WASH complex subunit FAM21A 1 SPMFPALGEAS(0.129)S(0.871)DDDLFQSAKPKPAKK 144.92 2.0767e-06 849930000.0 208140.0 270200.0 233530.0 168000.0 185300.0 156420.0 138310.0 145180.0 267400.0 151440.0 True False 196594.0592831968 257219.18642153137 248583.7174612113 183966.66948895835 199882.05578722167 155443.724758947 152291.7245755196 144676.40446526665 218846.9006054476 150098.35941853712 1.309768208292072 1.7136708716735305 1.6561388040761706 1.2256407745002875 1.3316738208301582 1.0356124168253216 1.0146128523021791 0.9638773203499728 1.4580232685635872 1.0 17.19554868276333 -5.606605296849278 1.6533201811495268 1.0998291062668724 1.5703641549857208 0.52634619556789 0.17886118966036282 0.27900636825392977 1.5601503608410603 0.06124744189667547 0.09417526181855997 2.473971561947531e-06 5.606605296849278 0.47053504871884844 SPPAS(ph)PESWK ddPTM_KYSE-520_SHP099_60min_R1 6 SPPASPESWK 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 SPPAS(1)PESWK;SPPAS(1)PESWK;SPPAS(1)PESWK;SPPAS(1)PESWK;SPPAS(1)PESWK;S(0.001)PPAS(0.998)PES(0.001)WK 179.94 1.5474e-05 3248750000.0 4721860.0 4873710.0 4400000.0 4446370.0 4670100.0 5672050.0 4867380.0 4947340.0 5977760.0 5239940.0 True False 4459929.013005458 4639569.656012148 4683631.040248915 4868951.667950115 5037610.300765806 5636648.6320098825 5359422.27145103 4930178.832257832 4892349.471066638 5193518.208211633 0.858749085726459 0.8933384788516538 0.9018223971648891 0.9375054582944686 0.9699802905861933 1.0853237451055051 1.0319444462478404 0.9492946081256773 0.9420106515331345 1.0 22.30828075375572 -5.52272992445121 1.8079437923340667 1.0013046547421205 0.8814822094331949 0.6257483710533648 0.039417467580250505 0.259499286345501 1.7063884423998394 0.014669211390635243 0.023650067738117064 3.00102819402494e-06 5.52272992445121 -0.11982244530892561 SPPLS(ph)PVGTTPVK ddPTM_KYSE-520_SHP099_60min_R1 4 SPPLSPVGTTPVK 13 0 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 SPPLS(0.999)PVGT(0.001)TPVK;SPPLS(1)PVGTTPVK;SPPLS(0.995)PVGT(0.005)TPVK;SPPLS(0.996)PVGT(0.004)TPVK 185.32 3.1282999999999996e-08 4498310000.0 3456720.0 4404550.0 3353260.0 2943350.0 3235090.0 5337300.0 4026350.0 5787200.0 6385200.0 5573900.0 True False 3264968.850799521 4192948.8066356615 3569416.5050057024 3223085.099049553 3489673.177855814 5303987.930929086 4433372.7513892185 5767125.553942637 5225808.637793204 5524519.582428585 0.5909959774935284 0.7589707564747986 0.6461044171802144 0.5834145487149638 0.6316699806721926 0.9600812978922318 0.8024901867467548 1.0439144015862827 0.9459299690808468 1.0 22.397417581125417 -6.261193768911117 24.999975981825965 0.9439782691255286 0.6456642557543925 0.8165563131647472 0.07301075777192947 9.736960883002673 991134.8295786406 0.02524517660980503 0.023750335636411133 5.480323950768176e-07 6.261193768911117 -0.29831401337113617 SPPMELQPPVS(ph)PQQSECNPVGALQELVVQK ddPTM_KYSE-520_SHP099_60min_R1 1 SPPMELQPPVSPQQSECNPVGALQELVVQK 30 0 H3BV98;F8VW32;F8VSA1;F8VZ57;Q15633-2;Q15633 H3BV98 TARBP2 RISC-loading complex subunit TARBP2 1 SPPMELQPPVS(0.963)PQQS(0.037)ECNPVGALQELVVQK 96.74799999999999 0.0017036999999999998 53992000.0 78474.0 101290.0 78678.0 83482.0 89781.0 117090.0 85925.0 104970.0 123600.0 117030.0 True False 74120.89078595935 96423.87636061033 83749.70976925103 91416.10418022136 96846.25391598773 116359.1978776698 94611.13754718773 104605.88357018228 101157.35570244308 115993.20524796212 0.6390106267648085 0.831289006580016 0.7220225494262081 0.7881160278724813 0.8349304056988219 1.0031552936995343 0.8156610324280176 0.9018276833247532 0.8720972533364864 1.0 16.823680770805343 -5.816212811059924 2.466960743018063 0.9067089495707982 0.7435357029991183 0.578322606097861 0.06956635085450141 0.21861122387761261 2.7214142172202154 0.022172031792885787 0.027144137486471626 1.5268177104449187e-06 5.816212811059924 -0.16317324657167986 SPPS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 SPPSPGR 7 0 Q03252 Q03252 LMNB2 Lamin-B2 1 S(0.112)PPS(0.888)PGR;SPPS(1)PGR 80.684 0.014272 3475500000.0 1033850.0 891140.0 769440.0 739600.0 772690.0 889010.0 908280.0 800370.0 978900.0 1000020.0 True False 976500.2795711203 848328.29677159 819039.3335475287 809891.3616311509 833496.3069952948 883461.3588284837 1000097.8063585628 797593.7032777618 801156.4360608549 991160.6008037864 0.9852089346360445 0.8558938844861611 0.8263437155223128 0.8171141598792019 0.840929619598849 0.8913402713062207 1.0090169096184096 0.8047068281678563 0.8083013342249009 1.0 19.91875931510872 -6.38005194850568 7.1693631890752485 0.89756886143849 0.8599001358048632 0.05322049723389288 0.07651900707748555 0.9662806460068006 53.34262724708656 0.02804354973109759 0.024670248449911527 4.168195222648538e-07 6.38005194850568 -0.037668725633626776 SPPS(ph)PGRR ddPTM_KYSE-520_SHP099_60min_R1 4 SPPSPGRR 8 1 Q03252 Q03252 LMNB2 Lamin-B2 1 SPPS(1)PGRR;SPPS(1)PGRR;S(0.001)PPS(0.999)PGRR;S(0.006)PPS(0.994)PGRR 101.97 0.0015529 2450090000.0 678889.0 589783.0 586912.0 535227.0 653184.0 622993.0 578797.0 553707.0 691240.0 550015.0 True False 641229.6738383302 561448.9393976692 624745.2866124022 586094.8131581346 704585.8646914226 619104.6695994805 637307.4492743624 551786.3196531847 565728.2407423689 545142.2950051955 1.176261096806328 1.029912638483349 1.1460224098121903 1.0751226212461624 1.2924806443145407 1.1356753553557608 1.1690662330067207 1.0121876888087098 1.0377625180173868 1.0 19.056273330938232 -7.266588154779054 24.59248614292459 1.0187313130586284 1.1443398729156569 0.45487178315756227 0.06503417615878297 339.5954514822426 1622017.872220413 0.03482816359672003 0.017562435531532788 5.41267368180581e-08 7.266588154779054 0.12560855985702846 SPPS(ph)PVER ddPTM_KYSE-520_SHP099_60min_R1 9 SPPSPVER 8 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 S(0.494)PPS(0.506)PVER;S(0.216)PPS(0.784)PVER;SPPS(1)PVER;SPPS(1)PVER;S(0.007)PPS(0.993)PVER;SPPS(1)PVER;S(0.066)PPS(0.934)PVER;S(0.055)PPS(0.945)PVER;S(0.026)PPS(0.974)PVER 112.95 0.0010514 70879790000.0 8466760.0 7431750.0 6640520.0 6290040.0 6260420.0 7371930.0 6142000.0 6750480.0 8805180.0 7884940.0 True False 7997091.944732383 7074717.574715818 7068578.544407658 6887843.510430515 6753079.437082769 7325919.050391405 6762893.300143456 6727064.160453871 7206381.272524576 7815085.5659904955 1.0232891088913907 0.9052642501450536 0.9044787142406387 0.881352283640357 0.8641081892270842 0.9374074011770474 0.8653639481023797 0.8607793355108675 0.9221116277837232 1.0 22.897830238448584 -4.256856402137511 4.215857353053629 0.8973450189832901 1.033758959083969 0.42638356434092495 0.040655862243708325 0.19078255044482598 7.70785929033331 0.009518913606487201 0.07908661115159131 5.5353310263198024e-05 4.256856402137511 0.13641394010067898 SPPS(ph)SSEIFTPAHEENVR ddPTM_KYSE-520_SHP099_60min_R1 1 SPPSSSEIFTPAHEENVR 18 0 I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L3A7 FAM195B Protein FAM195B 1 S(0.091)PPS(0.645)S(0.031)S(0.23)EIFT(0.003)PAHEENVR 163.51 2.5912e-08 447960000.0 64233.0 87997.0 79577.0 74602.0 71932.0 79541.0 71068.0 82887.0 101360.0 71395.0 True False 60669.86744468905 83769.49203381018 84706.66074770175 81692.15165009073 77592.63916290566 79044.55511476411 78252.24699684064 82599.48434297123 82955.57907766695 70762.49584446957 0.8573731991878393 1.1838120042844302 1.1970558660604675 1.1544554876872022 1.0965220804739308 1.1170402368013963 1.1058435130500903 1.1672777133881547 1.1723099657196494 1.0 16.110697313374004 -4.255718978337349 24.90780818208045 1.1381607985955904 0.8573730718349035 0.6927193356585566 0.05490429733662748 326.1241515244262 1419968.1930542605 0.013301100356151788 0.11470371280794578 5.549847142453563e-05 4.255718978337349 -0.28078772676068686 SPPSSS(ph)EIFTPAHEENVR ddPTM_KYSE-520_SHP099_60min_R1 1 SPPSSSEIFTPAHEENVR 18 0 I3L3A7;I3L2L5;I3L317;I3L4Q0;C9JLW8 I3L3A7 FAM195B Protein FAM195B 1 S(0.168)PPS(0.135)S(0.135)S(0.562)EIFT(0.001)PAHEENVR 176.28 9.0823e-09 689060000.0 79922.0 86525.0 101750.0 103470.0 98076.0 95936.0 77979.0 91754.0 104820.0 103190.0 True False 75488.56733944292 82368.20912332724 108308.9678057562 113303.7576906101 105794.02322389392 95337.22783834781 85861.87832170093 91435.72678954457 85787.33029716901 102275.8168806052 0.7380881389348061 0.805353715428959 1.0589890270169533 1.1078254972324368 1.03439920061842 0.9321580677242856 0.839513004544705 0.8940112098667944 0.8387841125465219 1.0 16.642105534565648 -9.699923440327833 13.793798995794614 1.000010569941599 0.9241063424757118 0.04294336883432426 0.11323515469601553 0.0 0.0 0.12249798218210116 0.02971012467422549 1.9956140811096935e-10 9.699923440327833 -0.07590422746588732 SPPST(ph)GSTYGSSQKEESAASGGAAYTK ddPTM_KYSE-520_SHP099_60min_R1 1 SPPSTGSTYGSSQKEESAASGGAAYTK 27 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.066)PPS(0.184)T(0.739)GS(0.01)T(0.001)YGSSQKEESAASGGAAYTK 135.88 7.2815e-06 5641000000.0 770760.0 761740.0 691720.0 712270.0 648330.0 661410.0 653580.0 655310.0 831730.0 740220.0 True False 728004.4063280333 725144.8670049495 736309.3779911324 779963.926648216 699349.882506905 657281.8948524174 719650.2447261093 653036.8825605043 680708.7982070642 733662.226682446 0.9922882490761493 0.9883906253208493 1.0036081335693903 1.0631103773396404 0.9532314150468149 0.8958916936811461 0.9809013174636269 0.8901056355504056 0.9278231500143705 1.0 19.484756482942984 -5.959860622611154 11.399555741805258 0.933572030678309 1.0094613952862366 0.4666452020259175 0.03694100484890739 0.5602972103993394 157.0452325344702 0.01109127408120056 0.012570580560379184 1.0968301434962235e-06 5.959860622611154 0.07588936460792761 SPPY(ph)TAFLGNLPYDVTEESIK ddPTM_KYSE-520_SHP099_60min_R1 3 SPPYTAFLGNLPYDVTEESIK 21 0 E7EX17;P23588-2;P23588;F8VX11;F8VP89;F8W0K0;F8VSC7;F8VRU1;F8VYE9 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.16)PPY(0.627)T(0.213)AFLGNLPYDVTEESIK;S(0.145)PPY(0.66)T(0.196)AFLGNLPYDVTEESIK;S(0.282)PPY(0.359)T(0.359)AFLGNLPYDVTEESIK 132.14 3.9062e-07 461886000.0 121196.0 115975.0 91256.0 107124.0 110158.0 127674.0 105410.0 122857.0 128234.0 130576.0 True False 114473.01628176376 110403.3869179759 97138.50777476258 117305.03275199494 118826.80788671742 126877.13920773428 116065.87150246199 122430.8377420394 104949.93811607684 129419.19822659077 0.8845134095278598 0.8530680797811663 0.7505726283722586 0.906395916211859 0.9181544122895283 0.9803579449286512 0.8968211292674724 0.9460021343022389 0.8109302140191561 1.0 16.981692119061474 -5.493292698898424 22.228984070555683 0.9229331629706318 0.8312081489229449 0.3607915118716384 0.057306029601714686 194.33928872305054 146012.58823680496 0.01575733688750058 0.0233044898555796 3.2114953764453947e-06 5.493292698898424 -0.09172501404768685 SPPYT(ph)AFLGNLPYDVTEESIK ddPTM_KYSE-520_SHP099_60min_R1 2 SPPYTAFLGNLPYDVTEESIK 21 0 E7EX17;P23588-2;P23588;F8VX11;F8VP89;F8W0K0;F8VSC7;F8VRU1;F8VYE9 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.331)PPY(0.292)T(0.377)AFLGNLPYDVTEESIK;S(0.329)PPY(0.273)T(0.398)AFLGNLPYDVTEESIK 122.57 0.00010005 544780000.0 120729.0 129716.0 103287.0 117854.0 111916.0 127185.0 111179.0 130257.0 147460.0 132526.0 True False 114031.92170270518 123484.2486523144 109945.04528504319 129054.80872590297 120723.15248506564 126391.19123811978 122418.05832247616 129805.16886921221 120684.98116409592 131351.92274366773 0.8681404833733389 0.9401023302361015 0.8370265389993575 0.9825117594795505 0.9190817306927128 0.9622332783416594 0.9319852786728829 0.9882243530041506 0.9187911272498975 1.0 17.003077793389146 -1.0000000000020068 0.15025150171260043 1.001688811584387 0.5498482175869361 0.3922151348869706 0.03872743087896332 69.53709952551385 0.6860993086967139 0.1286005483763308 6.852068131223169 0.0999999999995379 1.0000000000020068 -0.4518405939974508 SPQESALLFIPVHS(ph)PSTEGPQLPPVPAAT(ph)QEKSPEER ddPTM_KYSE-520_SHP099_60min_R1 1 SPQESALLFIPVHSPSTEGPQLPPVPAATQEKSPEER 37 1 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 2 SPQESALLFIPVHS(0.967)PS(0.013)T(0.02)EGPQLPPVPAAT(0.534)QEKS(0.466)PEER 205.65 3.3366999999999996e-15 597100000.0 201740.0 193130.0 181410.0 247310.0 208250.0 187310.0 183570.0 219660.0 250290.0 194510.0 True False 190549.0800412804 183851.74490596008 193103.97886626268 270814.26804353733 224638.09021958397 186140.92881088358 202127.04707055245 218898.0507290296 204843.64529744725 192786.79272649027 0.9883928112835793 0.9536532161038309 1.0016452690315898 1.4047345474943707 1.165215142814693 0.9655273900166217 1.0484486214639888 1.1354411141617144 1.062539826512194 1.0 17.55664669446604 -5.0241651972040025 24.98217253673095 1.1179512262785227 0.9726794536305327 0.21673460148697776 0.11421029182065212 1091.728177411929 1128637.878810798 0.03284592595584951 0.0573041918044073 9.45877299534882e-06 5.0241651972040025 -0.14527177264799007 SPQESALLFIPVHS(ph)PSTEGPQLPPVPAATQEKS(ph)PEER ddPTM_KYSE-520_SHP099_60min_R1 1 SPQESALLFIPVHSPSTEGPQLPPVPAATQEKSPEER 37 1 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 2 SPQESALLFIPVHS(0.933)PS(0.032)T(0.035)EGPQLPPVPAAT(0.353)QEKS(0.647)PEER 130.49 0.00020171 450240000.0 194800.0 173360.0 167880.0 180790.0 165780.0 176850.0 142310.0 187690.0 195670.0 174760.0 True False 183994.05567582723 165031.52538133488 178701.81341749727 197972.22724350425 178825.94284082888 175746.2135508234 156696.0836117576 187038.94719717538 160141.2604392966 173211.7623612226 1.0622491981353948 0.9527732016095517 1.0316956018542522 1.1429490962088662 1.0324122357689443 1.0146320963140791 0.9046503625139352 1.0798282093979106 0.9245403329211082 1.0 17.402177377503843 -6.526732103365669 24.942645262338143 0.9804405285681812 1.0420350187490999 0.20806688983037225 0.06155396229188944 200.6895952764594 1299030.8750338978 0.023615449899525628 0.01837445593473395 2.97349968367417e-07 6.526732103365669 0.06159449018091867 SPQESALLFIPVHSPSTEGPQLPPVPAAT(ph)QEKSPEER ddPTM_KYSE-520_SHP099_60min_R1 1 SPQESALLFIPVHSPSTEGPQLPPVPAATQEKSPEER 37 1 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 SPQESALLFIPVHSPSTEGPQLPPVPAAT(0.569)QEKS(0.431)PEER 155.38 3.7173e-07 200440000.0 47539.0 64460.0 54745.0 69548.0 49539.0 58536.0 50536.0 60528.0 60720.0 58627.0 True False 44901.91690335299 61363.24484356739 58273.950295097005 76157.82100963137 53437.43746164687 58170.65511117332 55644.67206383097 60318.04249534138 49694.77862663711 58107.61039111582 0.7727372817626335 1.0560276774511679 1.0028626182157823 1.3106341922688198 0.9196288937363877 1.0010849649406188 0.9576141866666502 1.038040320180909 0.8552197946559343 1.0 15.826439506251479 SPQLS(ph)LSPRPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SPQLSLSPRPASPK 14 1 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785 M0QXA7 WIZ Protein Wiz 2 S(0.008)PQLS(0.496)LS(0.496)PRPAS(1)PK 59.975 0.024406999999999998 339040000.0 751710.0 670610.0 666860.0 608720.0 707670.0 679420.0 701650.0 724400.0 855270.0 782150.0 True False 710011.1478032661 638392.8889938676 709846.8626137257 666572.5657816578 763359.6029084887 675179.4877619477 772579.6294440997 721887.2254762313 699974.5276021725 775220.7595034911 0.9158825264922084 0.8234981857332377 0.9156706059682461 0.8598487045271858 0.9846996401352833 0.8709512477379768 0.996593060715914 0.9312021338780729 0.9029357367190323 1.0 19.56424767938966 -5.747938441340726 24.999015781547573 0.9428945985635723 0.8774191954364423 0.3498934136660482 0.045782406192262724 269.71269918014224 499411.39278535073 0.012738260400092117 0.016353655982538302 1.7867408167856531e-06 5.747938441340726 -0.06547540312712996 SPQLSLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 SPQLSLSPR 9 0 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785 M0QXA7 WIZ Protein Wiz 1 SPQLSLS(1)PR;SPQLSLS(1)PR;SPQLSLS(1)PR 124.06 0.00069077 1128040000.0 1212880.0 1293290.0 993440.0 949050.0 1063520.0 1124350.0 1178470.0 1322290.0 1356000.0 1303470.0 True False 1145599.1285836622 1231158.4071321322 1057478.731960201 1039247.4266577126 1147212.9733989537 1117332.5145935437 1297601.248358852 1317703.2846148075 1109784.5819782598 1291922.2698843144 0.8867399806384987 0.9529663168066425 0.8185312356717043 0.8044194692539609 0.8879891616867022 0.864860480107364 1.0043957586357313 1.0199555463447516 0.8590180755051431 1.0 20.30108784041955 -6.751785274331765 24.96188002889914 0.9725053074698566 0.8686557149817752 0.44111635210944766 0.05600545029559614 189.65284839521112 490371.7008828147 0.02222991518693541 0.016996716747452744 1.7709843592781708e-07 6.751785274331765 -0.10384959248808145 SPQLSLS(ph)PRPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 SPQLSLSPRPASPK 14 1 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785 M0QXA7 WIZ Protein Wiz 2 S(0.047)PQLS(0.219)LS(0.735)PRPAS(1)PK;S(0.001)PQLS(0.118)LS(0.881)PRPAS(1)PK;SPQLSLS(1)PRPAS(1)PK;SPQLS(0.027)LS(0.974)PRPAS(0.999)PK;SPQLS(0.006)LS(0.994)PRPAS(1)PK;S(0.001)PQLS(0.02)LS(0.979)PRPAS(1)PK 153.72 5.2819e-06 4239010000.0 5983890.0 5150210.0 5074590.0 5582520.0 5812010.0 5596030.0 6042430.0 6381500.0 7290820.0 6441520.0 True False 5651951.693111022 4902786.180977187 5401706.191031076 6113081.022354155 6269382.121186673 5561103.101028072 6653257.792833895 6359364.065953303 5966990.874615584 6384453.144226733 0.8852679415811691 0.7679257831832673 0.8460718669249966 0.9574948526142805 0.9819763697155307 0.8710382824340732 1.0421030027998928 0.9960702854721212 0.9346126817472774 1.0 22.606131621531027 -5.239449713058713 3.8487424152496774 0.969408171999825 0.8227294715678404 0.6100791224053359 0.04998229194227031 0.1435522509551163 4.7916142805970825 0.013962684807254438 0.024097543261872745 5.761695293451129e-06 5.239449713058713 -0.1466787004319846 SPQLSLSPRPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SPQLSLSPRPASPK 14 1 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785 M0QXA7 WIZ Protein Wiz 1 SPQLS(0.001)LS(0.052)PRPAS(0.947)PK 91.65700000000001 0.0037162 204860000.0 192750.0 264040.0 213110.0 153900.0 171000.0 219250.0 165090.0 199120.0 235340.0 210470.0 True False 182057.7732624012 251355.12206787968 226847.4115880561 168526.60972827795 184456.72714309185 217881.57942334207 181778.908323133 198429.29919495725 192608.18843861643 208605.39954318205 0.872737588102146 1.204931045017597 1.0874474586219802 0.8078727113359899 0.8842375487260993 1.0444675924040012 0.8714007821523532 0.9512184230585157 0.9233135329210204 1.0 17.670416975503283 -5.231905824401127 24.76776454335111 0.9249523273869529 1.0700279701412272 0.2623869796788473 0.09811601659356553 755.1056203469501 633254.1459330424 0.025849551661059622 0.04476401648541549 5.862652807919811e-06 5.231905824401127 0.14507564275427431 SPQQTVPYVVPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SPQQTVPYVVPLSPK 15 0 H0Y6S1;B4DRC2;Q9UQR0 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 SPQQTVPYVVPLS(1)PK;SPQQTVPYVVPLS(1)PK 126.8 7.3384e-05 373510000.0 535850.0 529400.0 380980.0 383330.0 421070.0 581010.0 382310.0 496710.0 579840.0 558270.0 True False 506125.3323095074 503966.8293543994 405538.5803895529 419761.5679476335 454205.81343942496 577383.7010752831 420957.62578603835 494987.0289429859 474555.67257689807 553324.1621274871 0.9146994961570014 0.910798522545423 0.732913196543396 0.7586178169658883 0.8208674851519947 1.04348181517194 0.7607794031033995 0.8945696986009076 0.8576449485818033 1.0 19.07776539807369 SPQS(ph)PGGNICHLGAPK ddPTM_KYSE-520_SHP099_60min_R1 2 SPQSPGGNICHLGAPK 16 0 Q9H609 Q9H609 ZNF576 Zinc finger protein 576 1 S(0.005)PQS(0.995)PGGNICHLGAPK;S(0.013)PQS(0.987)PGGNICHLGAPK 101.48 0.00065955 1164610000.0 1053400.0 1130380.0 894840.0 1127990.0 966370.0 1174820.0 882460.0 1053070.0 1290860.0 1329320.0 True False 994965.802099161 1076074.8480650294 952522.8181946229 1235193.8304574415 1042417.821106839 1167487.512602647 971667.6687796472 1049417.145958386 1056472.363932489 1317543.258995312 0.7551674643744666 0.8167282863149301 0.7229537335426586 0.9374977421229678 0.7911829945543731 0.886109434837768 0.7374844523287903 0.7964954006585069 0.8018502289921761 1.0 20.32941890007733 -11.233626387333793 2.127666288411109 1.6075230468639985 0.8066135590849464 0.471333012886046 0.061919497950356304 4948711.442301222 862833.8330057069 14447744.29798873 0.014923166594380888 5.839472434429213e-12 11.233626387333793 -0.8009094877790521 SPQT(ph)PELVEALAFR ddPTM_KYSE-520_SHP099_60min_R1 4 SPQTPELVEALAFR 14 0 A0A0C4DG79;Q9NZB2-4;Q9NZB2;Q9NZB2-6 A0A0C4DG79 FAM120A Constitutive coactivator of PPAR-gamma-like protein 1 1 SPQT(1)PELVEALAFR;SPQT(1)PELVEALAFR;SPQT(1)PELVEALAFR;S(0.011)PQT(0.989)PELVEALAFR 310.2 9.733899999999998e-42 726039000.0 283240.0 358001.0 242697.0 228762.0 249531.0 331364.0 262016.0 303650.0 336439.0 329917.0 True False 267528.1125750585 340802.09458954347 258341.63694892995 250503.47170019688 269167.67006282334 329295.8343627649 288503.1343097339 302596.70902244264 275350.15853700903 326994.19205154193 0.8181433159304854 1.0422267516477024 0.7900496193162027 0.7660792692633258 0.8231573422576148 1.0070387865202821 0.882288252582355 0.9253886349600555 0.84206437065282 1.0 18.318905485778362 -6.226374205691962 24.987863820598065 0.9236261209084321 0.8509624716592578 0.19478143349713994 0.08396587230863839 1246.8439275734731 888516.0716413428 0.02865223216484899 0.02865090747551977 5.937803129988758e-07 6.226374205691962 -0.07266364924917434 SPQTLAPVGEDAMKT(ph)PS(ph)PAAEDAREPEAK ddPTM_KYSE-520_SHP099_60min_R1 3 SPQTLAPVGEDAMKTPSPAAEDAREPEAK 29 2 Q92797 Q92797 SYMPK Symplekin 2 S(0.003)PQT(0.003)LAPVGEDAMKT(0.995)PS(0.999)PAAEDAREPEAK;SPQT(0.001)LAPVGEDAMKT(0.999)PS(1)PAAEDAREPEAK;SPQTLAPVGEDAMKT(1)PS(1)PAAEDAREPEAK 124.18 0.00069695 2438310000.0 1131700.0 1021370.0 897710.0 966590.0 1113290.0 998160.0 940770.0 1063290.0 1255670.0 952910.0 True False 1068922.34501198 972301.8520923733 955577.8229867839 1058454.4229841202 1200899.5892463892 991930.113191348 1035872.2126304067 1059601.6951637524 1027671.9808647796 944467.9587527608 1.1317719517172085 1.0294704474425678 1.0117630927879169 1.120688545519201 1.2715090841538608 1.0502527947070481 1.0967785651493693 1.1219032740539279 1.088096182978929 1.0 19.849142328189053 -5.288932089630443 23.36697477007286 1.116172058318286 1.0548486859319555 0.0803487188628551 0.07183739336922135 657.1026402057487 558491.7625756472 0.020355400804044292 0.030202981381501914 5.141240385670324e-06 5.288932089630443 -0.061323372386330455 SPRAVGCAEPEIWDPSPR ddPTM_KYSE-520_SHP099_60min_R1 1 SPRAVGCAEPEIWDPSPR 18 1 Q69YZ2 Q69YZ2 TMEM200B Transmembrane protein 200B 0 89.43 0.038911 0.0 365200.0 360300.0 331440.0 313650.0 348010.0 383250.0 286740.0 353050.0 418980.0 346270.0 False True 344941.6279918491 342990.6471786741 352805.15272274974 343459.20169768896 375396.40709396126 380857.99459063075 315726.477512721 351825.35195248964 342903.7936262919 343202.3171939832 1.0050678876881907 0.9993832500402687 1.0279801010881255 1.000748492917548 1.0938049899056523 1.1097185989433866 0.919942732596026 1.0251252230142507 0.9991301819575928 1.0 18.388699767929815 -6.764030882052873 24.999996883084467 0.9881433237388867 1.037819393688605 0.2679636555881767 0.043133783637586166 112.83833880223992 1088514.9923353898 0.018664883906506897 0.013233955152461353 1.7217461397535983e-07 6.764030882052873 0.049676069949718404 SPRPAS(ph)PASNVVVLPSGSTVYVK ddPTM_KYSE-520_SHP099_60min_R1 1 SPRPASPASNVVVLPSGSTVYVK 23 1 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-2;Q7Z589-6;Q7Z589-4 Q7Z589 EMSY;C11orf30 Protein EMSY 1 S(0.209)PRPAS(0.768)PAS(0.023)NVVVLPSGSTVYVK 124.08 7.178e-05 323860000.0 191960.0 219300.0 175920.0 156880.0 154410.0 200220.0 152460.0 179080.0 229250.0 210370.0 True False 181311.59613722697 208764.49882398883 187260.0846819521 171789.8280323081 166561.18852727948 198970.35271216187 167872.14466621142 178458.8132775863 187623.97892220944 208506.28546538355 0.8695737672010301 1.0012383960417737 0.8981028282384381 0.8239071913293897 0.7988305395950864 0.9542654902132202 0.8051179094746366 0.8558917678633445 0.8998480717424655 1.0 17.669731349104634 -5.0706470622193125 0.0034600029609035787 1.761332759855735 2.9734811448453507e-07 0.03661823831307576 0.06956186571604538 350863.59931065276 252.20906926483244 62994.01750665904 65404.6028100001 8.49870858403917e-06 5.0706470622193125 -1.7613324625076203 SPRPDHPGT(ph)PPHK ddPTM_KYSE-520_SHP099_60min_R1 2 SPRPDHPGTPPHK 13 1 P30291 P30291 WEE1 Wee1-like protein kinase 1 SPRPDHPGT(1)PPHK;SPRPDHPGT(1)PPHK 125.45 0.00012589 940880000.0 423740.0 355330.0 434680.0 511620.0 413460.0 417870.0 437410.0 413930.0 511730.0 392630.0 True False 400234.29749525245 338259.4134387961 462700.1683125902 560244.2109758379 445996.94973440113 415261.91832899395 481627.6715102162 412494.17344198807 418812.7316635213 389151.603661518 1.0284791164406304 0.8692227148908587 1.1889972030413225 1.439655408597867 1.1460750657019696 1.0670954826391683 1.2376350681292152 1.0599832290573656 1.0762199814234927 1.0 18.569972776799016 -7.789399215417966 1.810240542274525 1.009473373918881 1.1394406657148917 0.0832097066650539 0.1402947262750717 0.9650704025252054 6.300966526329302 0.145408692127405 0.042677084030234104 1.6240551932468944e-08 7.789399215417966 0.12996729179601063 SPRPT(ph)SAPAITQGQVAEGGVLDASAK ddPTM_KYSE-520_SHP099_60min_R1 3 SPRPTSAPAITQGQVAEGGVLDASAK 26 1 P11171;P11171-2;P11171-5;P11171-7;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y570;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8YCW8;A0A3B3IUD6;A0A2R8Y7Y3;A0A2R8YD30;Q4VB86;A0A2R8Y7N0;A0A2R8Y420;A0A2R8Y6D0;A0A3B3ITP0;A0A1B0GWG0;A0A2R8Y4N6;P11171-4;P11171-3;P11171-6;A0A2R8Y5C8 P11171 EPB41 Protein 4.1 1 S(0.057)PRPT(0.598)S(0.345)APAITQGQVAEGGVLDASAK;SPRPT(0.661)S(0.339)APAITQGQVAEGGVLDASAK;S(0.004)PRPT(0.644)S(0.352)APAITQGQVAEGGVLDASAK 324.23 2.3764999999999995e-61 4247100000.0 3210540.0 3586780.0 2771050.0 2679520.0 2791980.0 3732030.0 3039450.0 3930840.0 3892210.0 4000790.0 True False 3032444.946147179 3414465.704933463 2949676.316836763 2934180.7751729377 3011692.941806838 3708737.0164437657 3346707.268173402 3917204.8335049516 3185482.778629497 3965346.113167518 0.7647365096523346 0.8610763367150285 0.7438635197673986 0.7399557797564144 0.7595031696744117 0.9352870873310041 0.8439886891739831 0.9878595012166262 0.8033303241932982 1.0 21.919015365633655 -6.258646913344973 24.943769264217067 0.908952814386688 0.7751278617683525 0.5474756524799977 0.0636707047493182 192.33502188132542 1718040.717990593 0.020544764464672793 0.01967221350848109 5.512556917981029e-07 6.258646913344973 -0.1338249526183355 SPRPTS(ph)APAITQGQVAEGGVLDASAK ddPTM_KYSE-520_SHP099_60min_R1 1 SPRPTSAPAITQGQVAEGGVLDASAK 26 1 P11171;P11171-2;P11171-5;P11171-7;A0A2U3TZH6;A0A3B3IU06;A0A2R8Y5Z6;A0A2R8Y5G2;A0A2R8Y570;A0A2R8Y6G5;A0A2R8YFR9;A0A2R8YCW8;A0A3B3IUD6;A0A2R8Y7Y3;A0A2R8YD30;Q4VB86;A0A2R8Y7N0;A0A2R8Y420;A0A2R8Y6D0;A0A3B3ITP0;A0A1B0GWG0;A0A2R8Y4N6;P11171-4;P11171-3;P11171-6;A0A2R8Y5C8 P11171 EPB41 Protein 4.1 1 SPRPT(0.435)S(0.564)APAITQGQVAEGGVLDASAK 241.53 3.2526e-29 1811100000.0 1026300.0 1046500.0 833270.0 798320.0 923910.0 1147100.0 967390.0 1308500.0 1254800.0 1331200.0 True False 969369.093121671 996224.5691714763 886983.917479139 874192.0927763403 996616.4606711927 1139940.5234048585 1065183.2220165704 1303961.1189061964 1026959.9509338646 1319406.6036579292 0.7347008044633 0.7550550121619359 0.6722597226814392 0.6625645880145862 0.7553520331853489 0.8639797013630839 0.8073199111353933 0.9882936126673069 0.7783498643153034 1.0 20.33145780008808 -6.356839083335925 1.5339631918981897 0.8995377599178838 0.7059435676985215 0.6194142532730016 0.06856430089694873 0.26335315950521876 1.2383111409421357 0.030631545601882314 0.025788891417535306 4.3970450646812206e-07 6.356839083335925 -0.19359419221936225 SPS(ph)AGDVHILTGFAK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSAGDVHILTGFAK 15 0 A0A3B3ITL0;Q9Y2H2;A0A3B3IRJ9;Q9Y2H2-4 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 S(0.211)PS(0.789)AGDVHILTGFAK;S(0.078)PS(0.922)AGDVHILTGFAK;S(0.007)PS(0.993)AGDVHILTGFAK;S(0.008)PS(0.992)AGDVHILTGFAK 237.46 7.352199999999999e-19 2093840000.0 4868670.0 3969330.0 3605880.0 3950450.0 4001540.0 4320010.0 3797250.0 4170880.0 4566750.0 4086690.0 True False 4598595.169646975 3778637.428714205 3838320.7944119903 4325899.580253897 4316438.432351859 4293047.215163655 4181113.0875886935 4156412.1907707094 3737543.3183991294 4050485.1059967126 1.1353196097027463 0.9328851556866512 0.9476200242606461 1.0679954294485456 1.065659623327933 1.059884705860992 1.0322499597390413 1.0261517033150356 0.922739676999608 1.0 21.949663271915203 -7.683853126287787 8.788214554484856 0.9616872729803073 1.0305012521449575 0.19584433214218255 0.05821546471779099 0.4466185014164179 45.09945832857829 0.0405804262710142 0.015192157453283643 2.0708415666760837e-08 7.683853126287787 0.06881397916465015 SPS(ph)APAATSSASSSTSSYK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSAPAATSSASSSTSSYK 19 0 A0A087X0S7;A0A0C4DH00;A0A087WTU1;A0A0B4J2G4;Q15345-3;Q15345 A0A087X0S7 LRRC41 Leucine-rich repeat-containing protein 41 1 S(0.036)PS(0.964)APAATSSASSSTSSYK 295.98 4.7579e-36 0.0 194150.0 190080.0 148430.0 152790.0 153510.0 184630.0 151820.0 169810.0 203960.0 190410.0 True False 183380.11247157012 180948.27148410326 157998.0352963971 167311.1156620114 165590.363647579 183477.6556849787 167167.44722041342 169220.96874395205 166926.00541319008 188723.1155367386 0.9716886664891436 0.9588029053541043 0.8371949289149995 0.8865427808679911 0.8774249152078228 0.972205525344145 0.8857815151312032 0.8966626492079606 0.8845021710162193 1.0 17.525911615063563 SPS(ph)GLRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSGLRPR 8 1 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4 P49815 TSC2 Tuberin 1 S(0.303)PS(0.697)GLRPR 50.703 0.051961 292290000.0 90863.0 83632.0 64374.0 83198.0 88382.0 95186.0 98553.0 105490.0 115530.0 81435.0 True False 85822.64825910023 79614.19318580878 68523.65104204173 91105.11290560912 95337.16057520885 94591.908866546 108515.69902459111 105124.079811551 94552.6642742981 80713.54925547123 1.0632991492848107 0.9863795350371372 0.8489733343921412 1.128746211088388 1.1811791385043864 1.1719458472473756 1.344454555964596 1.3024341115122637 1.171459626623826 1.0 16.300523256310065 -5.492654292795717 3.9918571892602714 1.2142325182919873 0.9680304154248572 0.5051392081636958 0.09991970367681884 0.167493516732252 5.8541219721450055 0.029712741466050064 0.04299242827810985 3.2162196959575574e-06 5.492654292795717 -0.24620210286713007 SPS(ph)GSAFGSQENLR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSGSAFGSQENLR 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 SPS(1)GSAFGSQENLR;S(0.333)PS(0.667)GSAFGSQENLR 215.04 8.1334e-14 1304860000.0 795300.0 711700.0 698510.0 702540.0 700390.0 743380.0 592400.0 703190.0 808540.0 697980.0 True False 751183.1236087559 677508.8637165208 743537.0722555168 769309.1903736477 755506.708326023 738740.2896771895 652285.5732668478 700750.7980157792 661729.5176347365 691796.4402202227 1.0858441586800134 0.9793471378673854 1.074791700314074 1.1120456042369198 1.0920939519225035 1.0678578939232803 0.9428865708808833 1.0129436309222783 0.9565379050289492 1.0 19.39998806448497 -6.746196104727738 24.789982631432235 0.9791706689076367 1.0679191031166286 0.5817558702559966 0.03761431034193213 165.3699760962769 268939.62720464537 0.01510422902703018 0.011653287008156803 1.7939234017123664e-07 6.746196104727738 0.08874843420899192 SPS(ph)IVASNQGR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSIVASNQGR 11 0 Q8TED9;Q8TED9-4 Q8TED9 AFAP1L1 Actin filament-associated protein 1-like 1 1 S(0.022)PS(0.978)IVASNQGR 81.803 0.008065899999999999 949620000.0 1151200.0 1086600.0 895550.0 758050.0 892620.0 1008400.0 872430.0 1057600.0 1374200.0 1098600.0 True False 1087340.6411396954 1034398.1049801474 953278.5859306618 830094.8440839559 962864.1156869382 1002106.2015530128 960623.7384962799 1053931.4324456954 1124679.9207629238 1088867.2586978667 0.9985979764328694 0.9499763141166934 0.8754773167398292 0.7623471432841442 0.8842805291421741 0.920319895329934 0.8822229990137199 0.9679154405891958 1.0328898327863067 1.0 20.054396658465482 -7.444515586364222 3.1707055437471046 1.0151302703877763 0.8927135350472357 0.4180330339002891 0.0578513214812585 0.27453018442504806 5.237240129687004 0.044245248840262034 0.01730031215253051 3.5932250082393284e-08 7.444515586364222 -0.12241673534054054 SPS(ph)LAK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSLAK 6 0 O15018-2;O15018;A6PVK7;Q5SW96;Q5VXU9-3;Q5VXU9 O15018-2 PDZD2;C9orf84;LDLRAP1 PDZ domain-containing protein 2;Processed PDZ domain-containing protein 2;Low density lipoprotein receptor adapter protein 1;Uncharacterized protein C9orf84 1 S(0.49)PS(0.51)LAK 70.85600000000001 0.040036 1628200000.0 1419100.0 1236500.0 1091600.0 1283600.0 1149000.0 1302900.0 1457000.0 1477600.0 1588700.0 1453900.0 True False 1340379.6940942847 1177096.6839756607 1161966.2826217546 1405592.9580715874 1239419.7630842826 1294768.117813784 1604287.7789496952 1472474.550474432 1300232.1278678905 1441019.5771170834 0.9301606413813338 0.8168498906382458 0.8063501017428193 0.9754155879572637 0.860099184470399 0.8985083467110895 1.113300474487132 1.0218282762127895 0.9023001134163261 1.0 20.45865850484924 -6.59817698994366 9.358868129200502 1.0109860445550434 0.8761893225849655 0.47483793953757725 0.06628745058308465 0.28916971508809136 33.274006236478726 0.025793946186141777 0.01995935173160247 2.5224525767700035e-07 6.59817698994366 -0.13479672197007786 SPS(ph)LDNPTPFPNLGPSENPLKR ddPTM_KYSE-520_SHP099_60min_R1 3 SPSLDNPTPFPNLGPSENPLKR 22 1 M0R0R8;M0R0X9;M0QXC8;M0QX56;M0R3C2;M0QYT9;M0R205;M0QZB8;M0QZB7;Q14653-3;Q14653-2;Q14653;Q14653-4 M0R0R8 IRF3 Interferon regulatory factor 3 1 S(0.025)PS(0.975)LDNPTPFPNLGPSENPLKR;S(0.035)PS(0.965)LDNPTPFPNLGPSENPLKR;S(0.082)PS(0.918)LDNPTPFPNLGPSENPLKR 233.83 5.704e-27 5964800000.0 797080.0 748060.0 582330.0 576340.0 588400.0 666700.0 496530.0 602260.0 658240.0 594140.0 True False 752864.3834604138 712122.0747390479 619867.9235609428 631115.1803170603 634703.7324619605 662538.878000192 546724.0980658144 600170.9006285412 538720.2088800666 588876.3818339258 1.2784761058268008 1.209289583870388 1.0526282640687687 1.0717277849581792 1.0778216821760036 1.1250899143498683 0.9284191299422851 1.0191797788857504 0.9148273313362325 1.0 19.167605286704855 -1.000000000044091 0.31671535829767516 0.9683371657141543 4.009995891900481 0.7433395478624042 0.05499073740390889 28.435548669125605 0.4063055369771716 0.05364045218549209 49.92092331754755 0.09999999998984768 1.000000000044091 3.041658726186326 SPS(ph)LLQSGAK ddPTM_KYSE-520_SHP099_60min_R1 3 SPSLLQSGAK 10 0 I3L1L3;Q9BQG0;Q9BQG0-2;I3L2H8 I3L1L3 MYBBP1A Myb-binding protein 1A 1 S(0.002)PS(0.993)LLQS(0.005)GAK;S(0.013)PS(0.986)LLQS(0.001)GAK;S(0.034)PS(0.959)LLQS(0.007)GAK 91.62 0.0048403 1358670000.0 1835230.0 2228990.0 1912270.0 1794250.0 2234240.0 2018790.0 1802310.0 2420700.0 2523060.0 2420160.0 True False 1733426.133459695 2121905.9746178016 2035537.9839401809 1964774.9805390679 2410061.9769133385 2006189.9827778705 1984505.0836505299 2412303.156695629 2064935.9051667152 2398719.2652559867 0.7226465216531736 0.8845995466632298 0.8485936697235607 0.8190933424338804 1.0047286532532773 0.8363588069001371 0.8273186080567654 1.0056629767544694 0.860849343679386 1.0 21.19383289063932 -1.0000000000000002 0.15556146292468548 0.9887827292104444 0.22818630607085222 0.3743877376652043 0.07086131887965058 77.22975630610081 0.7821993231655765 0.22573000484126185 13.371217628851525 0.09999999999999995 1.0000000000000002 -0.7605964231395922 SPS(ph)LPPK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSLPPK 7 0 P41970 P41970 ELK3 ETS domain-containing protein Elk-3 1 S(0.039)PS(0.961)LPPK;S(0.039)PS(0.961)LPPK 67.89699999999999 0.0311 691070000.0 1841670.0 2077360.0 2019770.0 1452930.0 1585650.0 1691790.0 1692930.0 2112670.0 2093630.0 2017800.0 True False 1739508.8938218749 1977560.5074190705 2149967.605946262 1591016.030360665 1710431.6338856323 1681230.9110723636 1864067.885804599 2105341.6408708827 1713479.5681173631 1999923.8618246445 0.8697875589297793 0.9888178971047574 1.075024728183764 0.795538300597649 0.8552483754682081 0.8406474582179748 0.9320694259349971 1.0527108961788474 0.85677240060232 1.0 20.931513646194727 -9.346780471007895 9.72643357535433 0.999994549627804 0.9217620060382254 0.06920424606610276 0.08893866312895915 0.0 0.0 0.09005570331217036 0.021841716290903805 4.5000726896880084e-10 9.346780471007895 -0.07823254358957854 SPS(ph)MPCSVIRPILK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSMPCSVIRPILK 14 1 G8JLH2;B4DIG0;P30305-2;P30305;P30305-4;P30305-3 G8JLH2 CDC25B M-phase inducer phosphatase 2 1 S(0.055)PS(0.945)MPCSVIRPILK;S(0.07)PS(0.93)MPCSVIRPILK 170.09 1.604e-08 4736200000.0 932110.0 1096310.0 1047350.0 849060.0 955620.0 794220.0 817500.0 1036130.0 1143060.0 937620.0 True False 880404.0001847821 1043641.6220051402 1114863.8568192518 929754.4071208023 1030821.8572659722 789262.9783790491 900140.8780311432 1032535.9068645607 935509.1181976921 929313.4162573223 0.9473703755730591 1.1230243788024266 1.1996640071217388 1.0004745340546746 1.1092295012994224 0.8492968729082742 0.968608504175408 1.1110739270535361 1.0066669670662047 1.0 19.82580571025264 SPS(ph)MPENLNRPR ddPTM_KYSE-520_SHP099_60min_R1 4 SPSMPENLNRPR 12 1 P30307-4;P30307-3;P30307-2;P30307;D6RJC2;H0Y999 P30307-4 CDC25C M-phase inducer phosphatase 3 1 S(0.034)PS(0.966)MPENLNRPR;S(0.009)PS(0.991)MPENLNRPR;S(0.004)PS(0.996)MPENLNRPR;S(0.198)PS(0.802)MPENLNRPR 140.43 2.3221e-05 6392070000.0 2890390.0 2962170.0 2867730.0 2669240.0 2697690.0 2698130.0 2534160.0 2753850.0 3309960.0 2689580.0 True False 2730054.304850387 2819862.9068921856 3052588.464330234 2922923.767063731 2909982.8552435515 2681289.9698494966 2790337.6238182285 2744297.5371034243 2708954.7013014443 2665752.4136615787 1.0241214791213433 1.0578112552541692 1.145113270342054 1.0964723325707924 1.0916178262956187 1.0058285818699029 1.0467354768275439 1.029464523051471 1.0162064141510143 1.0 21.346111363190854 -6.254888869561215 24.748237999536713 1.0231815612475363 1.0858225222221034 0.5052251677628574 0.031201720118913496 425.75443349745706 1608527.9345551569 0.011126921554694542 0.010873269866711846 5.560465243066411e-07 6.254888869561215 0.06264096097456706 SPS(ph)MPS(ph)LNQTWPELNQSSEDTAIVHPVPIR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSMPSLNQTWPELNQSSEDTAIVHPVPIR 30 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2 E9PMG1 REPS1 RalBP1-associated Eps domain-containing protein 1 2 S(0.03)PS(0.97)MPS(0.545)LNQT(0.453)WPELNQS(0.001)S(0.001)EDTAIVHPVPIR 79.422 0.0076862 44025000.0 25618.0 28875.0 23633.0 22532.0 26246.0 27116.0 24676.0 22242.0 40432.0 37340.0 True False 24196.91847178309 27487.801657741387 25156.420994136948 24673.434505507175 28311.41088068764 26946.7589858305 27170.490894552262 22164.847693321815 33090.56800777657 37009.1966500804 0.6538082601620191 0.7427289470138141 0.6797343166345736 0.6666838715466572 0.7649831242858425 0.7281098058034168 0.7341551115374788 0.5989010759376661 0.894117435745655 1.0 15.175596199285827 -7.94514425029737 5.183302608891629 0.9988245311163093 0.7015391608855007 0.8251317606477389 0.04733017317351779 0.06330848596340756 3.341145542743758 0.04461866248334869 0.011625656622571342 1.1346338860384153e-08 7.94514425029737 -0.2972853702308086 SPS(ph)MPSLNQTWPELNQSSEDTAIVHPVPIR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSMPSLNQTWPELNQSSEDTAIVHPVPIR 30 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2 E9PMG1 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.176)PS(0.824)MPS(0.001)LNQTWPELNQSSEDTAIVHPVPIR;S(0.239)PS(0.761)MPSLNQTWPELNQSSEDTAIVHPVPIR 229.12 3.1156999999999995e-23 1175940000.0 178615.0 211869.0 141785.0 200989.0 151247.0 199850.0 139755.0 228463.0 248104.0 193580.0 True False 168706.8698898252 201690.49521814752 150924.68796402085 220090.93413045345 163149.2784222877 198602.66201940645 153882.79927736058 227670.51517666507 203054.56779287197 191865.03180296088 0.8792997259817602 1.0512102873715783 0.7866190443656016 1.147113322642761 0.8503335750614353 1.0351165095230324 0.8020367121164277 1.186618077495618 1.0583198297509595 1.0 17.549732272778876 -7.272688932800452 24.999710034681538 1.0918517056005814 0.9432915458571625 0.24206578089155995 0.11721721006706257 1010.2871478606597 2245132.584777687 0.0578560235916427 0.028194192408706565 5.337170380848559e-08 7.272688932800452 -0.14856015974341896 SPS(ph)PAHLPDDPK ddPTM_KYSE-520_SHP099_60min_R1 14 SPSPAHLPDDPK 12 0 H0Y4V9;Q92615;A0A087X183;H0Y641 H0Y4V9 LARP4B La-related protein 4B 1 S(0.027)PS(0.973)PAHLPDDPK;S(0.022)PS(0.978)PAHLPDDPK;S(0.439)PS(0.561)PAHLPDDPK;S(0.122)PS(0.878)PAHLPDDPK;S(0.003)PS(0.997)PAHLPDDPK;SPS(1)PAHLPDDPK;S(0.001)PS(0.999)PAHLPDDPK;S(0.026)PS(0.974)PAHLPDDPK;S(0.256)PS(0.744)PAHLPDDPK;S(0.021)PS(0.979)PAHLPDDPK;S(0.018)PS(0.982)PAHLPDDPK;S(0.002)PS(0.998)PAHLPDDPK;S(0.009)PS(0.991)PAHLPDDPK;S(0.055)PS(0.945)PAHLPDDPK 240.92 2.4535e-15 22471060000.0 12891710.0 14910660.0 11880120.0 13884780.0 11213690.0 12451130.0 10942800.0 11851530.0 15364930.0 12472040.0 True False 12176581.147313256 14194329.512243051 12645931.54406407 15204385.316588655 12096143.60583167 12373417.879157837 12049005.015436321 11810419.808597902 12575046.030365214 12361547.428700302 0.9850369638223769 1.1482647778616701 1.023005543359685 1.2299742733897556 0.978529886779997 1.0009602722091229 0.9747165623829313 0.9554159684876649 1.0172711873571123 1.0 23.559356016513302 SPS(ph)PASGRR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPASGRR 9 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.063)PS(0.937)PASGRR;S(0.009)PS(0.991)PASGRR 66.84 0.017808 504860000.0 168742.0 175373.0 148698.0 139656.0 153740.0 153089.0 112685.0 136403.0 238910.0 117207.0 True False 159381.54488116273 166947.81783976022 158283.31100521202 152928.86425089248 165838.46333905813 152133.51476551875 124076.2994996198 135929.84982969955 195529.96643099267 116168.6371656663 1.3719842874103032 1.4371160918560018 1.36253049762034 1.316438481005876 1.4275665737780712 1.3095919731636647 1.0680705440546445 1.1701079839290194 1.6831562390815553 1.0 16.825861101588615 -6.523513527692932 24.997749972491913 1.2365553454186342 1.3800075817849193 0.147790156978844 0.17266941296758725 47.10473549914165 1854807.3990463703 0.0645038799904368 0.050430099978604585 2.9956182814671614e-07 6.523513527692932 0.14345223636628512 SPS(ph)PEPIYNSEGK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPEPIYNSEGK 13 0 Q15637-5;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-6 Q15637-5;Q15637-6 SF1 Splicing factor 1 1 SPS(1)PEPIYNSEGK 184.0 3.313e-08 260260000.0 266860.0 304150.0 233120.0 258030.0 221100.0 296910.0 223670.0 286430.0 320530.0 284050.0 True False 252056.74382777905 289538.1774615426 248147.28820518788 282553.09362045163 238499.31211308538 295056.87455682753 246280.74640883843 285436.4411832648 262329.8319037552 281533.537987556 0.8952991733401231 1.028432276776703 0.8814128859353025 1.0036214357983193 0.8471435190915948 1.0480345491550966 0.87478297672558 1.0138630133504067 0.9317889221260395 1.0 18.10294726958868 -8.909673990839455 0.41605130054295614 1.0071393491142309 0.9431728526572715 0.05446690931002307 0.06835929062189208 12.792632903459882 3.1426933353496227 0.22678697467956593 0.04167288655638947 1.2311926357964412e-09 8.909673990839455 -0.0639664964569594 SPS(ph)PGLFR ddPTM_KYSE-520_SHP099_60min_R1 7 SPSPGLFR 8 0 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 1 S(0.002)PS(0.998)PGLFR;S(0.001)PS(0.999)PGLFR;S(0.003)PS(0.997)PGLFR;SPS(1)PGLFR;SPS(1)PGLFR;SPS(1)PGLFR;S(0.009)PS(0.991)PGLFR 178.94 4.8277e-05 7823540000.0 9882610.0 7818710.0 8044560.0 6340890.0 6999360.0 8047880.0 6939320.0 7143090.0 7949180.0 7733270.0 True False 9334401.92280539 7443087.435477034 8563125.209351093 6943526.279141909 7550169.811089303 7997650.195710495 7640814.1868367875 7118312.287999735 6505809.294520608 7664759.244193017 1.2178336755818298 0.9710790904640709 1.117207329876499 0.9059027241335038 0.9850498326884137 1.0434313643666868 0.9968759544046514 0.9287065726679828 0.8487949963267988 1.0 22.869809045792206 -1.0000000000049118 0.7044196287173038 0.9620271024879096 30.96978828625061 0.511799142955685 0.07019305085121812 256.1618268987566 1.333482308871207 0.027557216254748104 12115.320548641484 0.09999999999886901 1.0000000000049118 30.0077611837627 SPS(ph)PIGVGSEMCR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPIGVGSEMCR 13 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 S(0.004)PS(0.996)PIGVGSEMCR;S(0.002)PS(0.998)PIGVGSEMCR 118.73 0.00011012 714770000.0 628500.0 566610.0 517220.0 448200.0 478190.0 524830.0 471590.0 539530.0 636960.0 541510.0 True False 593635.8521163111 539389.2051010511 550560.8287812598 490796.793243756 515820.83247108216 521554.3412941961 519262.91947487043 537658.4963572489 521304.12045492086 536712.6426884054 1.1060590060684543 1.004986956147034 1.0258018630295136 0.9144498456107614 0.961074495818329 0.9717571374538878 0.9674877731105255 1.0017623092761625 0.971290927382849 1.0 19.033790346764373 -4.046676847733753 1.2724306545868393 0.9715538115173927 1.21955587052406 0.6785975522259209 0.027122251006443478 1.3026423510063572 1.2930059767075794 0.008081370652143866 0.47862539270236687 8.980968068340642e-05 4.046676847733753 0.24800205900666716 SPS(ph)PISISSSETSSIMQK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPISISSSETSSIMQK 18 0 Q5VT06 Q5VT06 CEP350 Centrosome-associated protein 350 1 S(0.12)PS(0.88)PISISSSETSSIMQK 190.82 6.7204e-10 0.0 103410.0 102730.0 72952.0 94035.0 81080.0 94393.0 70657.0 84709.0 116180.0 88392.0 True False 97673.64115727581 97794.69659912621 77654.60264732708 102972.05812734626 87460.53471790561 93803.85827369441 77799.69910586718 84415.16425022931 95084.64065946476 87608.9156479354 1.1148824344520647 1.1162642052564984 0.8863778540461491 1.1753604911759106 0.9983063261434936 1.0707113263523769 0.8880340377515061 0.9635453609477319 1.085330641935705 1.0 16.418790074793158 -6.662027268855641 20.12571801949839 0.9808281347673236 1.0573714749658198 0.15746571168972034 0.08590911009094503 6.331985640641661 1265.2207879931268 0.032249547886294534 0.02498029442300351 2.177573040730705e-07 6.662027268855641 0.07654334019849629 SPS(ph)PKPTK ddPTM_KYSE-520_SHP099_60min_R1 3 SPSPKPTK 8 1 H3BMM9;H3BTC0;Q15287;H3BUL0;H3BV80;Q15287-2;Q15287-3;H3BMS0 H3BMM9;Q15287-2 RNPS1 RNA-binding protein with serine-rich domain 1 1 SPS(1)PKPTK;S(0.027)PS(0.973)PKPTK;S(0.006)PS(0.993)PKPT(0.001)K 133.81 0.0011814 2368740000.0 3009930.0 2628710.0 1614810.0 2804540.0 2834630.0 4105190.0 3389920.0 3503460.0 5221170.0 2801410.0 True False 2842963.1827533054 2502422.825825849 1718903.2363873506 3071082.6383843045 3057699.2541615334 4079567.9864670923 3732606.1960309874 3491307.3149737082 4273137.142984827 2776591.6868640035 1.0239039453309984 0.9012570475035124 0.6190695032760651 1.1060620302630493 1.1012419538052511 1.469271843522201 1.3443122421239926 1.2574075372662856 1.5389865075232156 1.0 21.40488360580848 -5.7707331147059495 2.027446000562694 1.3337560915614 0.8606582664136813 0.5568670325648966 0.17449121483586255 0.2194565371047466 1.856790817438794 0.057689829958148184 0.07433673712582145 1.6953793352396555e-06 5.7707331147059495 -0.4730978251477187 SPS(ph)PLGTSVR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPLGTSVR 10 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 S(0.013)PS(0.987)PLGTSVR;S(0.112)PS(0.888)PLGTSVR 183.08 4.8545e-06 973250000.0 1051150.0 1147870.0 1076640.0 774260.0 859390.0 1097330.0 754960.0 892330.0 1126610.0 975470.0 True False 992840.6140844245 1092724.602212004 1146041.9370849063 847845.4376102434 927019.1037397761 1090481.156436105 831278.7244995607 889234.7155013866 922046.0235269384 966828.0947041754 1.026905009817912 1.130216021025278 1.185362675497722 0.8769350438349254 0.9588251611817509 1.1278956025473839 0.8597999262256758 0.9197443892789127 0.9536814544151831 1.0 19.882899870897237 -5.259252579064263 24.99500765953279 0.956537908703576 1.1157667143537582 0.45940015696189995 0.0782708225097923 180.7351614997157 2065780.7012968017 0.022185040235130266 0.03612865041723243 5.504874481627443e-06 5.259252579064263 0.15922880565018216 SPS(ph)PLVSLQAVK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPLVSLQAVK 12 0 Q9UPZ3-2;Q9UPZ3 Q9UPZ3-2 HPS5 Hermansky-Pudlak syndrome 5 protein 1 SPS(1)PLVSLQAVK 150.9 1.7384e-05 205120000.0 326620.0 395320.0 260890.0 227500.0 259220.0 355160.0 234000.0 322430.0 408210.0 306240.0 True False 308501.7374991719 376328.2338125829 277707.3868387588 249121.5315996311 279619.1392399545 352943.3147000875 257655.0036199233 321311.5655857274 334089.35413668567 303526.9518511149 1.0163899305077106 1.2398511285982217 0.914934852226826 0.8207558837207622 0.9212333123455618 1.1628071660443917 0.8488702635748387 1.0585931945290188 1.1006909010853247 1.0 18.211465101545652 -9.673799566721183 14.139319172402258 0.9999999991953 1.0064536970275761 1.9777689412858734e-05 0.12867521291459472 0.0 0.0 0.1288330147833333 0.031246595765790877 2.1193390156455654e-10 9.673799566721183 0.006453697832276117 SPS(ph)PNIR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPNIR 7 0 A2AJT9-3;A2AJT9-2;A2AJT9 A2AJT9-3 CXorf23 Uncharacterized protein CXorf23 1 S(0.411)PS(0.589)PNIR;S(0.4)PS(0.6)PNIR 58.815 0.046766 492210000.0 222844.0 236579.0 222844.0 174625.0 208774.0 227860.0 165007.0 191885.0 244835.0 200993.0 True False 210482.39909149954 225213.38972768123 237208.88080300676 191221.30749707913 225203.3260384318 226437.8412196248 181687.51787313112 191219.39572129553 200379.1357880881 199212.3583901877 1.0565729997495323 1.1305191683267288 1.190733761298067 0.9598867712942946 1.130468650932473 1.136665631838522 0.9120293506955451 0.9598771746216832 1.0058569528885106 1.0 17.6039476240275 -6.756627532610772 24.99999322336345 0.9660972957172185 1.1011886125509691 0.5170482970841066 0.06216397671352946 97.92082681879414 508751.89832966967 0.02453213578349267 0.018370538372046344 1.7513480671181163e-07 6.756627532610772 0.13509131683375064 SPS(ph)PPDGSPAATPEIR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPPDGSPAATPEIR 16 0 O00499-6;O00499-11;O00499-2;O00499;O00499-7;O00499-8;O00499-4;O00499-3;O00499-5;O00499-9;O00499-10 O00499-6;O00499-9 BIN1 Myc box-dependent-interacting protein 1 1 SPS(1)PPDGSPAATPEIR;SPS(1)PPDGSPAATPEIR 201.16 5.9668e-10 0.0 260000.0 258980.0 221820.0 186077.0 197584.0 240720.0 217770.0 207490.0 275510.0 209186.0 True False 245577.28170284972 246538.2120630949 236118.87212454874 203761.70213390992 213132.7367008225 239217.57718944954 239784.3168303877 206770.26561853007 225484.3290419104 207332.7747842455 1.1844595335127415 1.189094258346985 1.1388400718133378 0.9827761305271118 1.0279741682067032 1.1537856348972515 1.1565191131981516 0.9972869259753998 1.0875479251968423 1.0 17.661588667493955 -5.030219749315043 7.290351213810088 1.0642681345601368 1.1816153823162547 0.45302976893006275 0.058061762410604977 0.20050485086032907 39.582720693228886 0.016682917458994063 0.03022640233652735 9.327822015054233e-06 5.030219749315043 0.11734724775611793 SPS(ph)PPLPTHIPPEPPRT(ph)PPFPAK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSPPLPTHIPPEPPRTPPFPAK 23 1 Q8IZ21-3;Q8IZ21;Q8IZ21-2 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 2 S(0.425)PS(0.574)PPLPT(0.001)HIPPEPPRT(1)PPFPAK;S(0.112)PS(0.888)PPLPTHIPPEPPRT(1)PPFPAK;S(0.201)PS(0.793)PPLPT(0.045)HIPPEPPRT(0.96)PPFPAK;S(0.018)PS(0.982)PPLPTHIPPEPPRT(1)PPFPAK 209.83 1.4286999999999999e-19 2861410000.0 3825563.0 3633885.0 3214162.0 3726229.0 3341876.0 3294481.0 3316136.0 3330491.0 4288636.0 3400378.0 True False 3613351.394319231 3459307.710027409 3421352.025361029 4080368.683828403 3604862.6285265842 3273918.92205332 3651363.389248535 3318938.304063442 3509927.8101157206 3370253.2963740486 1.0721305126254825 1.0264236559754043 1.015161688007829 1.210700895454459 1.0696117803385712 0.9714162806622363 1.0834091886140795 0.9847741437221307 1.0414433282780091 1.0 21.68442559268685 -6.026737981628233 24.118038774688234 1.0195744405351677 1.0809467487698838 0.23150466043564377 0.05716717373219368 789.475908695714 712117.3472675217 0.019367673419848977 0.01943817883764839 9.402904351150609e-07 6.026737981628233 0.06137230823471618 SPS(ph)PPPTRR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPPPTRR 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 S(0.214)PS(0.786)PPPTRR;S(0.228)PS(0.772)PPPTRR 56.086999999999996 0.032894 0.0 190162.0 197860.0 144100.0 154818.0 177366.0 231060.0 154083.0 174795.0 355920.0 127915.0 True False 179613.33478145112 188354.50860608518 153388.91656815214 169531.85617227084 191323.6951255064 229617.86883264466 169659.21334516522 174188.67694245972 291293.9000130546 126781.77261636396 1.416712600516741 1.4856592136161213 1.2098656881245873 1.3371942407310138 1.5090788776431092 1.8111268212620608 1.3381987792405026 1.3739252366311911 2.2976007828388476 1.0 16.951987818918752 -5.890583748109533 4.835952474014257 1.5817255014991976 1.3615245142582564 0.07843008387270833 0.3238552060963645 0.5427950499305987 20.81716617466949 0.09883450139437518 0.11305362970862101 1.2865191404251481e-06 5.890583748109533 -0.22020098724094117 SPS(ph)PPTQHTGQPPGQPSAPSQLSAPR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPPTQHTGQPPGQPSAPSQLSAPR 26 0 Q68EM7-2;I3L460;Q68EM7-3;Q68EM7-6;Q68EM7-5;Q68EM7;Q68EM7-7 Q68EM7-2;Q68EM7-3 ARHGAP17 Rho GTPase-activating protein 17 1 S(0.015)PS(0.967)PPT(0.016)QHT(0.002)GQPPGQPSAPSQLSAPR 93.568 0.0030275 3941500000.0 277190.0 285460.0 224590.0 266150.0 215470.0 208160.0 225950.0 222000.0 216960.0 201380.0 True False 261813.71813543426 271746.07311580423 239067.43075670543 291444.81597908464 232426.26314340316 206860.79622696855 248791.23105949417 221229.9338151894 177565.53311652172 199595.92987126936 1.3117187224423497 1.3614810346637256 1.197757042996285 1.4601741436664255 1.1644839816789248 1.0363978682350121 1.2464744707968425 1.1083890035126118 0.889625020064506 1.0 17.60672277620214 -6.654563727909859 0.5877739197903856 0.9668322097776957 1.3427111010503974 0.6036521042683196 0.10462280213799503 0.6000486204722374 0.43083817274480835 0.09573196897188559 0.0783075523428347 2.2153189989100828e-07 6.654563727909859 0.3758788912727017 SPS(ph)PRPNMPVR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPRPNMPVR 11 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 S(0.048)PS(0.952)PRPNMPVR 82.85 0.010328 460640000.0 431000.0 435450.0 399570.0 366130.0 378690.0 434090.0 382670.0 399220.0 479250.0 427700.0 True False 407091.5708228007 414530.32837622496 425326.92153460416 400926.8851190014 408490.74854863994 431380.68329249055 421354.01809929963 397835.1989986484 392230.28090935154 423910.9107455651 0.9603234087719448 0.9778713353878018 1.003340349948881 0.9457810001017904 0.9636240497565762 1.0176210905583623 0.9939683254630827 0.9384877551251151 0.9252658305479933 1.0 18.693401573823323 -7.264686687846695 24.875407898349707 0.9489075938538153 0.9806087118552922 0.15163114318079385 0.026950878046138296 433.130043077705 3317873.496074822 0.014081796025813244 0.0072355472890712254 5.436423888383567e-08 7.264686687846695 0.0317011180014769 SPS(ph)PSFR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPSFR 7 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 S(0.445)PS(0.551)PS(0.003)FR;S(0.404)PS(0.595)PS(0.001)FR 104.2 0.0088926 543870000.0 1696150.0 1654560.0 1786950.0 1573710.0 1678210.0 1917940.0 1682430.0 1576960.0 2039960.0 1745560.0 True False 1602061.1783088024 1575072.4540548087 1902139.6562210917 1723274.9252468373 1810275.5792912731 1905969.4250362818 1852506.443334478 1571489.893825231 1669554.687206764 1730095.6964251304 0.9259957016361097 0.9103961458949099 1.0994418748925006 0.996057575778966 1.046344189533456 1.1016554916439343 1.0707537433693888 0.9083254163757392 0.9650071326438987 1.0 20.722420408885384 -1.2335247456101137 16.597452387097825 1.0056945983901115 0.05607450312947537 0.0 0.07111776417580737 0.0 0.0 0.017413781417039944 0.0 0.058408392570086794 1.2335247456101137 -0.9496200952606362 SPS(ph)PSLSSLLLPS(ph)SPGPR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPSLSSLLLPSSPGPR 18 0 Q8TER5-4;Q8TER5-3;Q8TER5;Q8TER5-2 Q8TER5-4 ARHGEF40 Rho guanine nucleotide exchange factor 40 2 S(0.034)PS(0.963)PS(0.003)LSSLLLPS(0.55)S(0.449)PGPR;S(0.002)PS(0.998)PSLSSLLLPS(0.558)S(0.442)PGPR 137.05 8.9624e-06 110600000.0 109124.0 95879.0 101163.0 103645.0 106864.0 104461.0 110810.0 112971.0 131013.0 118562.0 True False 103070.67418669906 91272.82892268685 107684.12884652297 113495.38963799436 115273.58882701363 103809.02015115957 122011.75620138318 112579.12996862967 107224.34176896585 117511.63291984033 0.8771103900582161 0.7767131360088233 0.9163699471351818 0.9658225897976789 0.9809547017838366 0.8833935634438176 1.038295130190324 0.9580254071137337 0.9124572529947578 1.0 16.84244405612107 -4.944379318752567 4.983089923855369 0.9603858980338568 0.8279727136559051 0.5725474416508224 0.046343389317679305 0.1305155505570638 6.783404559073109 0.011857633470690684 0.02538556609856656 1.1366341003546732e-05 4.944379318752567 -0.1324131843779517 SPS(ph)PSVR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPSVR 7 0 A0A088AWL3;O75376-2;O75376;E7EVK1 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 S(0.045)PS(0.954)PSVR;S(0.257)PS(0.743)PSVR 107.01 0.0036079000000000003 493030000.0 612120.0 616450.0 644720.0 609870.0 573720.0 634840.0 574200.0 554020.0 756480.0 613470.0 True False 578164.4833690318 586834.8166896862 686279.6827884732 667831.8614358985 618868.4999797336 630877.7280780587 632245.7396519649 552098.2339292406 619122.3013089331 608035.133072438 0.9508734806943343 0.9651330733544535 1.1286842576360034 1.0983441993907557 1.017817008126741 1.0375678867275246 1.0398177757544853 0.9080038371129233 1.0182344204034246 1.0 19.21379516133756 -7.197209199598206 24.959674662015193 0.972338990894902 1.03701003335702 0.18148891362291542 0.05669122642141113 325.66589439244586 126552.69467689778 0.02833175054834292 0.01635734093229764 6.350249667180669e-08 7.197209199598206 0.06467104246211797 SPS(ph)PVLR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSPVLR 7 0 A0A0A0MSA7;A0A0U1RQK7;O43432;O43432-3;O43432-2 A0A0A0MSA7 EIF4G3 Eukaryotic translation initiation factor 4 gamma 3 1 S(0.076)PS(0.924)PVLR;S(0.245)PS(0.755)PVLR 119.86 0.0025428 3726360000.0 1297600.0 1181170.0 1235660.0 935640.0 1057060.0 1177370.0 890380.0 1085750.0 1231130.0 1102430.0 True False 1225619.5412985294 1124424.8202276856 1315312.620725902 1024562.9442895754 1140244.6081513232 1170021.597106773 980388.2996713982 1081983.7866659556 1007587.8262617222 1092663.3278775602 1.1216808599948436 1.0290679585740472 1.2037675166428676 0.9376748703369903 1.0435461491749587 1.0707979001907908 0.8972464570360844 0.9902261374211679 0.9221393274165314 1.0 20.059417514686047 -5.816152248362415 0.7227275926554636 0.9560830987584148 1.1107553871585456 0.3764768664539907 0.07063130143686243 0.8147973986328416 0.9284561063367857 0.04262625927692446 0.07111957633308397 1.5270306411881892e-06 5.816152248362415 0.1546722884001308 SPS(ph)PVQGK ddPTM_KYSE-520_SHP099_60min_R1 9 SPSPVQGK 8 0 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 S(0.003)PS(0.997)PVQGK;S(0.152)PS(0.848)PVQGK;S(0.027)PS(0.973)PVQGK;S(0.282)PS(0.718)PVQGK;S(0.004)PS(0.996)PVQGK;S(0.004)PS(0.996)PVQGK;S(0.129)PS(0.871)PVQGK;S(0.3)PS(0.7)PVQGK;S(0.135)PS(0.865)PVQGK 138.36 0.00066317 20886580000.0 36108900.0 31694700.0 29812700.0 26095400.0 27483800.0 31645800.0 29742200.0 30627800.0 37287500.0 31342600.0 True False 34105867.335692406 30172039.037285373 31734474.34400654 28575498.97013191 29646618.69856904 31448286.823786497 32748831.831899468 30521559.31038229 30517029.9413823 31064928.948173832 1.0978897583378293 0.9712573007207554 1.0215530959993413 0.9198636513157625 0.9543436828079992 1.0123405360511923 1.0542059145390263 0.9825085826303336 0.9823627793353205 1.0 24.88878341875719 -4.255766001318326 24.7561228314437 0.9887538148109369 1.0978898120763547 0.46466895935324937 0.0351546146512216 538.6348486538027 2350286.797161333 0.009344704676285278 0.08084873035839427 5.549246268530948e-05 4.255766001318326 0.10913599726541778 SPS(ph)PYYSR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPYYSR 8 0 P62995;P62995-3;H7C2L4;H7BXF3;Q13595;Q13595-3;Q13595-4 P62995;Q13595 TRA2B;TRA2A Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha 1 S(0.304)PS(0.696)PYYSR 139.32 0.00064314 5160000000.0 1159100.0 1142800.0 753990.0 941730.0 869950.0 1198800.0 904610.0 998620.0 1347600.0 837410.0 True False 1094802.412391436 1087898.1726222297 802593.4018266551 1031231.7360585509 938410.1156615935 1191317.8445277198 996056.8069428145 995156.0202996593 1102909.8102314912 829991.1988951212 1.319053037970559 1.3107345885961592 0.9669902559148363 1.2424610495042836 1.130626586053923 1.435337924201599 1.2000811674494365 1.1989958708289972 1.3288210907533446 1.0 19.662736512850973 -10.017235916571108 4.500372340531824 0.9999921683113738 1.2318980044913896 0.2547243789491772 0.12133900747973857 40684922.54325548 1.5783803177679518 3693.0671252389693 0.029356970811141594 9.610900551577917e-11 10.017235916571108 0.2319058361800158 SPS(ph)TLLPK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSTLLPK 8 0 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-4;B5MEG9;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 S(0.312)PS(0.688)TLLPK;S(0.316)PS(0.682)T(0.001)LLPK 134.66 0.00074041 38298000000.0 3431800.0 2948900.0 2856900.0 2757700.0 2721000.0 2631100.0 2431680.0 2897900.0 3229500.0 2802300.0 True False 3241431.2128763096 2807230.4176108595 3041060.3452016176 3019790.978867261 2935127.219627792 2614678.3289430127 2677497.9453098103 2887847.861274942 2643104.2090699035 2777473.8021564116 1.1670429475733253 1.0107135539609213 1.0949015406880018 1.0872437308041272 1.0567614417637277 0.9413872155744527 0.964004752531246 1.0397390099711603 0.9516216523870776 1.0 21.405341873133942 -6.091943908610936 4.865426379893848 0.9812755985493434 1.0834852525450285 0.5924592413863095 0.043619120101865076 0.16734932318386345 6.562999364460052 0.014108955381274347 0.01427195226775945 8.092004048666499e-07 6.091943908610936 0.10220965399568505 SPS(ph)VAAMASPQLCR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSVAAMASPQLCR 14 0 P25325-2 P25325-2 1 S(0.033)PS(0.967)VAAMASPQLCR;S(0.002)PS(0.998)VAAMASPQLCR 78.69 0.011336 353060000.0 334279.0 367263.0 298134.0 279373.0 335202.0 298693.0 268616.0 357716.0 442380.0 351905.0 True False 315735.87750133424 349619.1342069979 317352.19467126613 305924.5259234448 361580.49036151246 296828.7461924572 295770.32671952696 356475.1666875417 362054.9434922882 348787.39547794696 0.9052387832670332 1.002384658218257 0.9098728875692171 0.8771088918056607 1.0366787763819132 0.8510305992729746 0.847996030115222 1.0220414249748335 1.0380390696061723 1.0 18.41198837920179 -7.297916231035197 22.54480004706484 1.0225304005877525 0.9218464610346094 0.39231441955683577 0.05771537462917008 202.16323429676973 124946.16376758082 0.0321107164576235 0.01542710250533739 5.0359773595512396e-08 7.297916231035197 -0.10068393955314303 SPS(ph)WQRPNQGVPSTGR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSWQRPNQGVPSTGR 16 1 Q96HC4;H0Y8Y3;Q96HC4-7;Q96HC4-4;Q96HC4-6;A0A0A0MSP3 Q96HC4 PDLIM5 PDZ and LIM domain protein 5 1 S(0.048)PS(0.952)WQRPNQGVPSTGR 83.751 0.0062964 1978800000.0 647270.0 539860.0 537470.0 528090.0 457430.0 652460.0 678560.0 736110.0 743740.0 790350.0 True False 611364.6427992446 513924.3152536196 572116.1761824061 578279.5148239518 493427.13857932383 648387.7551222516 747155.4669074148 733556.6062193656 608695.5641596694 783348.1138829951 0.7804507752865557 0.6560612148615985 0.7303472952101349 0.738215238634412 0.6298951000640625 0.8277134311439704 0.9537974926674986 0.9364375725412589 0.7770435051441094 1.0 19.57929404704162 -6.4909657626242785 4.952375978497935 0.9100320193214736 0.7078742332532306 0.6903783209544812 0.06634890353334147 0.11252080924000722 7.070218667141773 0.02375573830607383 0.019946101114465885 3.2287486483713224e-07 6.4909657626242785 -0.20215778606824297 SPS(ph)YPPPGCGK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSYPPPGCGK 11 0 F5H3X8;E9PFI7;Q8N3A8-2;Q8N3A8 F5H3X8 PARP8 Poly [ADP-ribose] polymerase 8 1 S(0.238)PS(0.761)Y(0.001)PPPGCGK 67.456 0.054969000000000004 0.0 420160.0 432400.0 388190.0 394720.0 413140.0 415490.0 388020.0 484940.0 444860.0 508220.0 True False 396852.8872318049 411626.8549543679 413213.34852596046 432234.0701231043 445651.7675549522 412896.7727918099 427244.8483102676 483257.8563258469 364084.6380080005 503717.5661891767 0.7878480201398464 0.8171778841633188 0.8203274538390302 0.8580881413231756 0.8847254840177298 0.8196989751926618 0.8481833411976168 0.9593825761961895 0.722795198036164 1.0 18.9422555175475 -13.999999999999998 0.24101576420501375 1.892283553827149 0.8248982323293883 0.3883038138736272 0.05988417102117388 176.4346892577568 1.7606159105711103 77.4879942223792 0.0899950010714621 1.0000000000000041e-14 13.999999999999998 -1.0673853214977607 SPSDLHIS(ph)PLAK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSDLHISPLAK 12 0 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785;O95785-2 M0QXA7 WIZ Protein Wiz 1 SPSDLHIS(1)PLAK 119.45 8.677899999999999e-05 288450000.0 314490.0 400480.0 325600.0 552760.0 284630.0 349880.0 281980.0 256860.0 395490.0 347710.0 True False 297044.6127797277 381240.339667265 346588.69697841996 605294.1442066462 307028.76167683187 347696.26913860405 310485.29025959823 255969.01261157444 323678.9854915795 344629.5599142869 0.8619243597490763 1.106232267951953 1.0056847621098444 1.7563616549816257 0.8908950287177724 1.0088985669861863 0.9009247214220953 0.7427366726035826 0.9392084230153733 1.0 18.394686925601423 SPSEGQTATTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 SPSEGQTATTSPR 13 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 SPSEGQTATT(0.008)S(0.992)PR;SPSEGQTATT(0.004)S(0.996)PR;SPSEGQTATT(0.001)S(0.999)PR;SPSEGQTAT(0.003)T(0.023)S(0.974)PR 179.46 2.1087e-07 852390000.0 1494700.0 1396270.0 1313840.0 1058930.0 1135210.0 1324590.0 1150480.0 1308790.0 1525210.0 1343330.0 True False 1411786.0113894206 1329191.0933560026 1398532.228618325 1159570.3888210866 1224544.5685386506 1316322.742478286 1266781.746002774 1304250.1129638834 1248270.3114152362 1331429.1412949257 1.0603538465564462 0.9983190634262771 1.0503992929418204 0.8709215930885423 0.9197219217747323 0.9886539971613153 0.9514451101548846 0.9795865754413273 0.9375416781107776 1.0 20.344544219635644 -5.229394602409556 24.996000345930476 0.9492924940756964 1.0325535833597315 0.5209712556509859 0.038027325928349016 559.8611744893058 436709.70275239274 0.010424438515412334 0.018053628769847688 5.896650637006528e-06 5.229394602409556 0.08326108928403508 SPSFGDPQLS(ph)PEAR ddPTM_KYSE-520_SHP099_60min_R1 4 SPSFGDPQLSPEAR 14 0 O95425-2;O95425-3;A0A6I8PIX7;O95425-4;O95425 O95425-2 SVIL Supervillin 1 SPS(0.001)FGDPQLS(0.999)PEAR;SPSFGDPQLS(1)PEAR;SPSFGDPQLS(1)PEAR;SPSFGDPQLS(1)PEAR 161.08 9.309199999999999e-06 342430000.0 1885180.0 1689880.0 1423910.0 1350580.0 1405180.0 1790210.0 1521500.0 1821400.0 1870560.0 1858660.0 True False 1780605.3073868388 1608695.6282384053 1515697.5169365548 1478938.7171333155 1515759.6716194695 1779036.6353453188 1675308.0684090306 1815081.9885179568 1530913.4569802743 1842193.7184155982 0.9665678965175665 0.8732499802583108 0.8227677153519715 0.8028138964697455 0.8228014548454317 0.9657163725839873 0.9094092828901297 0.9852829104634234 0.8310274004717352 1.0 20.812993347312936 -6.261680270855178 24.999986135157965 0.935562506554109 0.8535241339341968 0.3049942105346194 0.06064199611853105 28.59225240042376 2967230.8236529883 0.02085552507228876 0.019562776812355805 5.47418826271218e-07 6.261680270855178 -0.0820383726199122 SPSFGDPQLS(ph)PEARPR ddPTM_KYSE-520_SHP099_60min_R1 10 SPSFGDPQLSPEARPR 16 1 O95425-2;O95425-3 O95425-2 SVIL Supervillin 1 SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR;SPSFGDPQLS(1)PEARPR 138.04 1.228e-05 14229740000.0 10074040.0 9507980.0 8941750.0 7550110.0 8212200.0 8288830.0 7380030.0 8189330.0 10422020.0 8722900.0 True False 9515212.919099139 9051202.36903106 9518149.51230584 8267670.184376664 8858453.418973679 8237096.337384636 8126075.454551899 8160923.125633993 8529643.885744141 8645621.892313503 1.100581662906026 1.046911660233273 1.1009213253667813 0.9562840345501507 1.0246172605407826 0.9527476958838471 0.9399064122589593 0.9439370848370737 0.9865853482821781 1.0 23.04353831210294 -5.264066480413933 24.99963740881719 0.9697267460548097 1.0792155636778555 0.7579492029354074 0.028649954931565292 110.34874843194432 1050084.0206749148 0.008104268661690702 0.012670887869215755 5.444193084924402e-06 5.264066480413933 0.10948881762304585 SPSGPSGS(ph)LENGTK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSGPSGSLENGTK 14 0 Q14134-2;Q14134;E9PM74;E9PI31;E9PLI4;E9PJ94;E9PJD4 Q14134-2 TRIM29 Tripartite motif-containing protein 29 1 SPS(0.001)GPS(0.262)GS(0.736)LENGTK 179.74 8.6507e-07 0.0 262880.0 230900.0 172510.0 165760.0 190800.0 207590.0 170800.0 224820.0 262860.0 217410.0 True False 248297.52236171186 219807.217412034 183630.27062575932 181513.78056243877 205814.87449650228 206294.35380839914 188066.13084736266 224040.1518933826 215131.25016136118 215483.91654242063 1.1522786774335962 1.0200632183551492 0.8521762253639449 0.8423541927163068 0.9551287065825403 0.9573538346551613 0.8727617998828212 1.039707071823514 0.9983633749250608 1.0 17.717220666765524 -9.614400356294995 11.385155869496039 1.000023139211557 0.9591207751350851 0.008401409601264898 0.09033636741964383 0.0 0.0 0.09257530761210868 0.02245281009463358 2.429962904161952e-10 9.614400356294995 -0.040902364076471964 SPSGPVKS(ph)PPLSPVGTTPVK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSGPVKSPPLSPVGTTPVK 20 1 C9J4K0;Q9BVC5-2;Q9BVC5 C9J4K0 C2orf49 Ashwin 1 S(0.021)PS(0.021)GPVKS(0.957)PPLSPVGTTPVK 92.147 0.0001691 0.0 271060.0 310120.0 195260.0 159120.0 212090.0 277900.0 176100.0 222770.0 284670.0 245400.0 True False 256023.76145528606 295221.3697003897 207846.77202704595 174242.7169588277 228780.2763729724 276165.523018229 193901.90657037796 221997.26286490881 232981.10394671917 243225.94691831115 1.0526169789823991 1.2137741611898893 0.8545419378996292 0.7163821095836791 0.9406080201213467 1.1354278871858223 0.7972089697958954 0.9127203149073067 0.9578793171477188 1.0 17.891937615609894 -4.765532245424445 24.999769406347156 0.9088090238233434 1.1331955900461261 0.37278854787390825 0.11336655619621666 98.78121967783072 603383.9789462098 0.0306601097548428 0.06773359345709291 1.7158043106384643e-05 4.765532245424445 0.22438656622278275 SPSGSAFGS(ph)QENLR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSGSAFGSQENLR 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GWE0 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 SPSGSAFGS(1)QENLR;SPSGS(0.043)AFGS(0.957)QENLR 240.87 2.2171e-17 377470000.0 544090.0 479320.0 427820.0 435950.0 445530.0 437550.0 381750.0 422350.0 510720.0 408280.0 True False 513908.24308347504 456292.74772601255 455397.9617362025 477382.55692685256 480590.6762810622 434819.088149069 420341.0155209646 420884.9664272308 417986.1222034929 404662.95683703385 1.2699661147645807 1.127587143860492 1.1253759555748035 1.1797041188504547 1.1876319988305872 1.074521600760654 1.0387434985561197 1.0400877058700728 1.0329241042239123 1.0 18.626361264058193 -6.422187946806131 3.0440898410561865 1.032156004872651 1.1726136791943658 0.7674520119223703 0.03924490407962244 0.1379635516008995 2.4553785526322756 0.015387813620510345 0.013003533520925375 3.7827884400731393e-07 6.422187946806131 0.14045767432171474 SPSGSQRPS(ph)VSDDTEHLVNGR ddPTM_KYSE-520_SHP099_60min_R1 2 SPSGSQRPSVSDDTEHLVNGR 21 1 P16144-4;P16144-2;P16144-3 P16144-4 ITGB4 Integrin beta-4 1 SPSGSQRPS(0.988)VS(0.011)DDTEHLVNGR;SPSGSQRPS(0.997)VS(0.002)DDTEHLVNGR 251.76 3.5462e-27 1971290000.0 173792.0 270520.0 212690.0 333730.0 271770.0 348620.0 347270.0 447610.0 514950.0 422460.0 True False 164151.41131423702 257523.81314120165 226400.3377160321 365447.5988604164 293156.7528402225 346444.13326597743 382375.44062859326 446057.3453829589 421448.0608331162 418717.3330689065 0.3920339530993892 0.6150302192023708 0.5406997032023376 0.8727787698253138 0.7001304452614551 0.8273938189441148 0.9132066203852789 1.065294675321103 1.0065216496871419 1.0 18.67561711502511 -4.785125511383973 0.3549576975002771 1.0610604516664752 0.1147662349821495 0.8582446160210263 0.07980719172422496 1.5682442178876683 0.20876437596687691 0.07954128732861773 0.6174063248054331 1.64011571020781e-05 4.785125511383973 -0.9462942166843258 down SPSHS(ph)GEPFGLPGLEPEPGGPQAGEPPPPLAGDKPHK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSHSGEPFGLPGLEPEPGGPQAGEPPPPLAGDKPHK 37 1 A0A087WVT1;Q96MX3 A0A087WVT1 ZNF48 Zinc finger protein 48 1 S(0.32)PS(0.32)HS(0.361)GEPFGLPGLEPEPGGPQAGEPPPPLAGDKPHK 123.42 4.5675e-05 3433700000.0 622970.0 471440.0 608080.0 588280.0 578500.0 595690.0 771750.0 619910.0 877220.0 679870.0 True False 588412.6122400942 448791.3147541335 647277.8097623995 644189.954327169 624024.6587852543 591972.0777500137 849766.0215541692 617759.6768980818 717938.9609166437 673846.8807308567 0.8732141218816653 0.6660137897609215 0.9605710559353777 0.9559886270134222 0.9260629923944073 0.878496428013377 1.2610669365012273 0.9167656548740828 1.065433381746851 1.0 19.362061277258512 -5.2569588157907265 0.7274977146821915 1.0365192880247613 0.7519812852356905 0.36009352418952445 0.11483224592353805 1.1021438116888882 1.0020913199230357 0.05785035222943976 0.21031745927606496 5.534025859757208e-06 5.2569588157907265 -0.2845380027890708 SPSLS(ph)PS(ph)PPSPLEK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 SPSLS(1)PS(0.531)PPS(0.469)PLEK 175.15 4.5243000000000004e-08 183220000.0 693890.0 610730.0 627760.0 588900.0 650400.0 651990.0 693650.0 726090.0 777210.0 665570.0 True False 655398.5384645782 581389.6140755812 668226.4140515142 644868.8789407591 701582.7797302161 647920.6885665893 763770.911371623 723571.3632606805 636088.2558697069 659673.5676056248 0.9935194778887937 0.8813292552948788 1.0129652708034569 0.9775575536267107 1.0635302279530565 0.9821837957193067 1.1578012957891186 1.0968627496884276 0.9642469959475198 1.0 19.331392773305275 -5.445905774579728 1.2510056829782552 1.0544286110746617 0.9426861189474508 0.26124440758294243 0.06258619028443106 0.5698653301774641 1.7860974492535704 0.0227819629360274 0.04656918154681007 3.5817413886790906e-06 5.445905774579728 -0.11174249212721088 SPSLS(ph)PSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 7 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 SPS(0.001)LS(0.999)PS(0.329)PPS(0.671)PLEK;SPS(0.001)LS(0.999)PS(0.011)PPS(0.989)PLEK;SPSLS(1)PS(0.028)PPS(0.972)PLEK;SPSLS(1)PS(0.054)PPS(0.947)PLEK;SPSLS(1)PSPPS(1)PLEK;SPSLS(1)PSPPS(1)PLEK;SPSLS(1)PS(0.04)PPS(0.96)PLEK 319.8 1.1424999999999999e-42 7295860000.0 6921200.0 6359040.0 5843560.0 6571970.0 6772100.0 7189950.0 6858940.0 7339330.0 8385940.0 7347130.0 True False 6537267.238929854 6053542.173286364 6220245.227626579 7196568.052865167 7305025.742021813 7145074.855073462 7552308.592003572 7313871.577242508 6863264.688344226 7282040.144180646 0.8977246910886685 0.8312975558262995 0.8541899116825677 0.9882626173952388 1.0031564777707982 0.9811913575872501 1.0371143858687606 1.0043712246062388 0.9424920149374514 1.0 22.795911263368165 -5.273692331966891 6.580770051339793 0.9959454482328988 0.8577351944808816 0.8357550615342948 0.026946193071573827 0.053861025214517966 12.101085841684801 0.007525213719275273 0.011820956624153325 5.324853552504974e-06 5.273692331966891 -0.13821025375201712 SPSLSLAPLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 SPSLSLAPLSPR 12 0 G3V160;Q969H4-2;Q969H4 G3V160 CNKSR1 Connector enhancer of kinase suppressor of ras 1 1 SPSLSLAPLS(1)PR;SPSLSLAPLS(1)PR;SPSLSLAPLS(1)PR;SPSLSLAPLS(1)PR 145.58 2.6574e-05 2306480000.0 805260.0 877250.0 752300.0 650680.0 805920.0 1180350.0 876100.0 927660.0 1220410.0 965130.0 True False 760590.6225539872 835105.5932209052 800794.4617225599 712520.4315659238 869341.3189424581 1172982.9978213978 964664.7379120283 924442.1639774727 998814.3080325127 956579.6990597779 0.7951147440214043 0.8730120386641389 0.8371434837156388 0.7448625893548234 0.9088017650771113 1.2262261042904452 1.0084520284720628 0.9664037036183256 1.044151688577802 1.0 19.867525648599663 -6.007831079807148 24.291300465868133 1.0469769103109072 0.8196386167454529 0.7078594797305159 0.07188136811817651 145.7448356702237 452089.7292892113 0.02314940981486796 0.025112484863027033 9.821298712147456e-07 6.007831079807148 -0.22733829356545432 SPSLSPSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 11 SPSLSPSPPSPLEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SPSLSPSPPS(1)PLEK;SPSLSPS(0.003)PPS(0.997)PLEK;SPSLSPS(0.01)PPS(0.99)PLEK;SPSLSPS(0.003)PPS(0.997)PLEK;SPSLSPS(0.031)PPS(0.969)PLEK;SPSLSPS(0.003)PPS(0.997)PLEK;SPSLSPS(0.018)PPS(0.982)PLEK;SPSLSPSPPS(1)PLEK;SPSLSPS(0.005)PPS(0.995)PLEK;SPSLSPS(0.011)PPS(0.989)PLEK;SPSLSPS(0.001)PPS(0.999)PLEK 300.61 2.9836999999999996e-33 60486310000.0 13193660.0 15571360.0 10948570.0 9985080.0 10442530.0 15332460.0 11483710.0 15446170.0 17074540.0 17348790.0 True False 12461781.378890852 14823288.49251214 11654332.340531368 10934059.001076227 11264297.701131875 15236764.42985275 12644595.477009187 15392590.841433184 13974233.95012616 17195093.21775438 0.7247289224360668 0.8620650266208916 0.6777708147867421 0.6358825080277278 0.6550879113293318 0.886111185144399 0.73536068207838 0.8951734455001347 0.8126873040558688 1.0 24.035493601211886 -7.814709645269265 0.6051362422974667 0.9940293645489875 0.7223546922240742 0.5072271631288692 0.08061402230543394 0.6751679844964624 0.5921653296099166 0.08547923211338158 0.03939062637931711 1.5321114376885714e-08 7.814709645269265 -0.27167467232491327 SPSMAVPS(ph)PGWVAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSMAVPSPGWVASPK 16 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 2 S(0.001)PS(0.001)MAVPS(0.998)PGWVAS(0.999)PK;SPS(0.001)MAVPS(0.999)PGWVAS(1)PK 76.176 0.010431999999999999 0.0 243657.0 229072.0 193423.0 226999.0 182700.0 213798.0 227628.0 255915.0 323530.0 254555.0 True False 230140.86049181258 218067.03727591794 205891.3560677422 248572.91671026192 197077.45057919805 212463.6073776589 250638.85967519632 255027.29059600993 264785.1075276009 252299.84074079298 0.9121720402838224 0.8643169834576113 0.8160582086108814 0.9852281950730203 0.7811239594941752 0.8421075762625593 0.9934166384698471 1.0108103510775461 1.0494858290443194 1.0 17.944779770079045 -6.835417793162348 5.107597307267033 1.0180472238991591 0.8659769670835705 0.6477230255009181 0.053112727231763336 0.13073654713846491 6.171204076105289 0.022588434586647534 0.015195166972654885 1.4607712300871477e-07 6.835417793162348 -0.1520702568155886 SPSPFDCS(ph)TDQEEKIEDVASHCLPQK ddPTM_KYSE-520_SHP099_60min_R1 1 SPSPFDCSTDQEEKIEDVASHCLPQK 26 1 Q8TD26;A0A075B6P4;Q8TD26-2;Q8TD26-3 Q8TD26 CHD6 Chromodomain-helicase-DNA-binding protein 6 1 S(0.038)PS(0.273)PFDCS(0.344)T(0.344)DQEEKIEDVASHCLPQK 75.479 0.011439 269320000.0 151380.0 104500.0 130220.0 100770.0 107590.0 128530.0 103620.0 112600.0 179690.0 91418.0 True False 142982.64963145158 99479.66314230218 138614.18955936667 110347.15050239477 116056.72089663874 127727.79659421732 114094.92083374561 112209.41688103761 147062.82561627825 90608.10764212781 1.5780337251516825 1.0979112767172456 1.5298210410358317 1.2178507351486654 1.2808646369155459 1.4096729301388795 1.259213152142885 1.2384037124384923 1.6230647504208782 1.0 16.467352528405467 -10.415298089375275 3.015027527829541 0.9940480187211682 1.345242511036029 0.2977441813336962 0.16430427961524363 23763346.072220735 28247173.954526734 1209599.674751083 0.03772378241849261 3.843278979901665e-11 10.415298089375275 0.3511944923148609 SPSPGGPQLS(ph)PQLPR ddPTM_KYSE-520_SHP099_60min_R1 5 SPSPGGPQLSPQLPR 15 0 H7C1V4;Q9HCH0-2;Q9HCH0 H7C1V4 NCKAP5L Nck-associated protein 5-like 1 SPSPGGPQLS(1)PQLPR;SPSPGGPQLS(1)PQLPR;SPSPGGPQLS(1)PQLPR;SPSPGGPQLS(1)PQLPR;SPSPGGPQLS(1)PQLPR 200.9 1.822e-11 3031700000.0 937751.0 1062760.0 813605.0 617609.0 669696.0 906674.0 636437.0 891536.0 961950.0 836606.0 True False 885732.0826697277 1011703.414364717 866051.280114027 676306.3736690835 722397.265150994 901015.1112523559 700774.2629865514 888443.4697020674 787284.1287861263 829194.3217096187 1.068183970246613 1.220104127436382 1.0444491205974702 0.8156186746125884 0.871203825493604 1.0866151487803948 0.8451267026789414 1.071453875697424 0.9494567294707438 1.0 19.661350711398583 -4.99984955935274 15.382282606727525 0.948187478959461 1.1411896069073635 0.42841992319473665 0.09095207187033089 0.06633683919330374 3762.15022307705 0.023580862375858234 0.04727207026700708 1.0003464623959973e-05 4.99984955935274 0.1930021279479025 SPSQNSQQSFDSSS(ph)PPTPQCHK ddPTM_KYSE-520_SHP099_60min_R1 2 SPSQNSQQSFDSSSPPTPQCHK 22 0 P11274;P11274-2 P11274 BCR Breakpoint cluster region protein 1 SPSQNSQQSFDS(0.003)S(0.019)S(0.978)PPTPQCHK;SPSQNSQQSFDS(0.005)S(0.033)S(0.962)PPTPQCHK 172.74 6.482899999999999e-10 1048420000.0 206866.0 221928.0 206030.0 247750.0 207690.0 243140.0 196887.0 254520.0 271380.0 231830.0 True False 195390.73060285256 211266.24575928046 219311.02345965567 271296.08551124664 224034.021405548 241622.47307179627 216790.2593919478 253637.1295254148 222104.23293308276 229776.166561011 0.8503524692190898 0.9194436869638709 0.9544550539858685 1.1806972392813906 0.9750098313441123 1.0515558540647854 0.9434845338251601 1.1038443774283622 0.9666112732980461 1.0 17.809869637227504 -4.845996809162713 2.9736341292388326 1.0322440603874674 0.876786396100856 0.4201666724760966 0.06882211736929032 0.22668897417859502 3.9746450155505624 0.017800834855415025 0.04694629503931435 1.4256180678282405e-05 4.845996809162713 -0.15545766428661145 SPSSDLDT(ph)DAEGDDFELLDQSELSQLDPASSR ddPTM_KYSE-520_SHP099_60min_R1 1 SPSSDLDTDAEGDDFELLDQSELSQLDPASSR 32 0 K7EQI9;Q86VR2-2;Q86VR2 K7EQI9 FAM134C Protein FAM134C 1 S(0.236)PS(0.236)S(0.236)DLDT(0.292)DAEGDDFELLDQSELSQLDPASSR 82.15700000000001 0.0087315 49712000.0 30841.0 35529.0 27882.0 24323.0 30053.0 36658.0 25124.0 32346.0 37542.0 29971.0 True False 29130.188249990715 33822.13350988378 29679.318332777333 26634.6506070234 32418.000121820653 36429.20382440534 27663.779106610906 32233.799275613146 30725.319156805206 29705.480257085157 0.9806334722712579 1.138582282365785 0.9991192896367469 0.8966241372472231 1.0913137859162712 1.2263462333929607 0.9312685358794266 1.0851128814160462 1.0343316751957512 1.0 14.858441492742784 -3.9652048061054574 16.498825320888233 1.0457971529524892 0.7362617696196696 0.041784690999581375 0.09197912436403229 12349423.934146514 159208585.35101047 0.023204446361099515 111532790.62176768 0.00010834158724980339 3.9652048061054574 -0.3095353833328196 SPSTPAKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 SPSTPAKSPK 10 1 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 S(0.005)PS(0.078)T(0.404)PAKS(0.513)PK;S(0.001)PST(0.002)PAKS(0.997)PK;S(0.004)PS(0.153)T(0.153)PAKS(0.689)PK 86.772 0.006746600000000001 1009010000.0 2277330.0 1715590.0 1514550.0 1351600.0 1617010.0 1777240.0 1560460.0 1460270.0 1742700.0 1919990.0 True False 2151001.9651551954 1633170.481246911 1612180.3163656804 1480055.6576266412 1744259.4874716415 1766147.5859262934 1718206.5254219908 1455204.6641995804 1426269.6098919725 1902980.3823296153 1.1303332315606711 0.8582171925743107 0.847187039517486 0.7777566554915124 0.9165935201792943 0.9280955296891646 0.9029029102856932 0.7646976698825076 0.7494925450287319 1.0 20.85982925838663 -4.261478061823223 7.539967919828951 0.8551900128375888 1.1332705831043102 0.5304972688921318 0.07599530818133617 0.07887097911568883 44.46085594383798 0.019297605710495228 0.1119552197324722 5.4767376573989486e-05 4.261478061823223 0.2780805702667214 SPSVPKS(ph)PTPK ddPTM_KYSE-520_SHP099_60min_R1 4 SPSVPKSPTPK 11 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 SPSVPKS(0.672)PT(0.328)PK;SPSVPKS(0.815)PT(0.185)PK;SPSVPKS(0.712)PT(0.288)PK;SPSVPKS(0.888)PT(0.112)PK 188.09 1.4314e-06 13384100000.0 12491100.0 11486200.0 10283700.0 8859220.0 9262640.0 12464600.0 10569680.0 11736200.0 13078400.0 12236300.0 True False 11798193.78260949 10934385.710862303 10946603.756501755 9701197.605178375 9991557.070787653 12386803.807891402 11638166.404536016 11695489.86144967 10703692.239634559 12127895.901697338 0.9728145655470456 0.901589673880034 0.9025971071346137 0.799907723797387 0.8238491781075812 1.021348130647941 0.9596195827264 0.9643461616299699 0.8825679513077402 1.0 23.5318259396909 -6.259763208766256 24.99957301738624 0.9629757007090507 0.8781316261311206 0.37407014409889494 0.05516879061853153 184.09920100081712 2745799.3319011345 0.019882105591391742 0.0189239179291302 5.49840582806134e-07 6.259763208766256 -0.08484407457793008 SPT(ph)AALNESLVECPK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTAALNESLVECPK 15 0 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 S(0.253)PT(0.747)AALNESLVECPK 249.89 1.8800999999999997e-18 721330000.0 337560.0 343070.0 300610.0 241500.0 279500.0 392040.0 295780.0 421710.0 477190.0 429850.0 True False 318834.87389082316 326588.40224143123 319987.80159300566 264452.0873903775 301495.0598625385 389593.1329401461 325680.3289346193 420247.1864378542 390544.3249809782 426041.8634182396 0.7483651285644369 0.7665641109095042 0.7510712656865787 0.6207185492726296 0.7076653393719782 0.914448007091002 0.7644326928851668 0.9863988084788353 0.9166806328550537 1.0 18.70063567291255 -6.942233051342737 0.970526180184646 0.9816976590301769 0.7214905833324576 0.6808357348298724 0.06836974604799052 0.3411721102145619 0.6044872728464669 0.056487593973688764 0.027942627102876066 1.1422652073149292e-07 6.942233051342737 -0.2602070756977193 SPT(ph)FSEELPVLGDGQQLR ddPTM_KYSE-520_SHP099_60min_R1 2 SPTFSEELPVLGDGQQLR 18 0 Q8N0Z3 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 S(0.061)PT(0.939)FSEELPVLGDGQQLR;S(0.186)PT(0.812)FS(0.002)EELPVLGDGQQLR 209.6 1.9797e-17 641714000.0 285470.0 248690.0 239500.0 222250.0 240150.0 257410.0 211059.0 274670.0 334220.0 278800.0 True False 269634.4100296635 236742.55910869958 254938.55321354917 243372.5731781011 259048.43873341213 255803.40870860848 232394.9034573394 273717.23387846 273534.073000571 276330.04890311783 0.9757694145098137 0.8567383824106015 0.922587153389646 0.88073148086558 0.9374602572600974 0.9257169450952254 0.841004821516236 0.9905445859578815 0.9898817522247567 1.0 18.07603292781541 -7.3486984940385085 10.247451677991888 0.9930240420119306 0.9055315770175797 0.5382982380631969 0.03724694775609378 0.4082444941182751 46.01673229583239 0.019221563008781944 0.009215987253883564 4.480242339810142e-08 7.3486984940385085 -0.08749246499435093 SPT(ph)GNTPPVIDSVSEK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTGNTPPVIDSVSEK 16 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 S(0.185)PT(0.813)GNT(0.001)PPVIDSVSEK 102.08 0.004432899999999999 512230000.0 360190.0 312290.0 297640.0 294320.0 274710.0 337310.0 289190.0 334250.0 355200.0 339030.0 True False 340209.5426790361 297287.1196431534 316826.350640838 322292.0843094653 296328.1141139108 335204.7231712083 318424.14742241724 333090.56476453657 290704.63386333175 336026.4579613488 1.0124486766401246 0.8847134283614911 0.942861322775008 0.9591271064331985 0.8818594699706526 0.9975545533077188 0.9476162959139477 0.991262910621312 0.8651242394037014 1.0 18.35821530644933 -6.285886157446477 24.977006043051603 0.958972065089321 0.9349850840050774 0.05405006447192984 0.05014580703656018 2653.980038935378 2711532.9011340193 0.016743866857076843 0.01477408231146581 5.177425311357045e-07 6.285886157446477 -0.023986981084243575 SPT(ph)GPSNSFLANMGGTVAHK ddPTM_KYSE-520_SHP099_60min_R1 2 SPTGPSNSFLANMGGTVAHK 20 0 Q5W012;Q96I25;H0Y6J6 Q5W012 RBM17 Splicing factor 45 1 S(0.173)PT(0.823)GPS(0.001)NS(0.003)FLANMGGTVAHK;S(0.258)PT(0.716)GPS(0.018)NS(0.008)FLANMGGTVAHK 217.09 3.0077999999999997e-17 4036090000.0 1111720.0 1169600.0 1143530.0 1645450.0 1243960.0 1019240.0 1151990.0 1189180.0 1382860.0 1041940.0 True False 1050050.6754411226 1113410.6603946085 1217243.7735126924 1801833.073277417 1341852.5748357922 1012878.5450921195 1268444.3915389543 1185055.012136698 1131767.4830637581 1032709.2222170538 1.0167921936310782 1.0781453640980394 1.1786897486007473 1.7447632252273135 1.2993517884492785 0.9807974241942363 1.2282686783950827 1.1475205088152338 1.0959207671584872 1.0 19.978002664069933 -6.235448093970537 24.206378588379557 1.1083319373715599 1.275268093725941 0.1603551374813753 0.19495530915090026 1127.63516688889 1050196.476892611 0.0704542544027517 0.07042983226283664 5.815029282512213e-07 6.235448093970537 0.1669361563543812 SPT(ph)KT(ph)DPK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTKTDPK 8 1 A0A0A0MRN4;Q5BKZ1-3;Q5BKZ1 A0A0A0MRN4 ZNF326 DBIRD complex subunit ZNF326 2 S(0.007)PT(0.993)KT(1)DPK 67.563 0.050839999999999996 0.0 43978.0 40508.0 38158.0 35879.0 39723.0 52627.0 37260.0 42159.0 44955.0 33108.0 True False 41538.452672030515 38561.9348762524 40617.725734958665 39288.929372585284 42848.974107046975 52298.535372005565 41026.604422557015 42012.760268984566 36792.30522332793 32814.68887763424 1.2658493526154442 1.175142480248696 1.2377909748412335 1.1972970250942634 1.3057863893462627 1.593753808455307 1.2502512084007549 1.280303477069366 1.1212145073362176 1.0 15.002054134246693 -7.928651408959927 2.4787478891495685 1.0009217160839365 1.2911512538563028 0.4301611611959335 0.1092714082255239 0.27264383592524616 3.6333165636715514 0.11364583969074761 0.031187868263572685 1.1785515708045412e-08 7.928651408959927 0.29022953777236626 SPT(ph)PAPFS(ph)PFNPTSLIK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTPAPFSPFNPTSLIK 17 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 2 S(0.411)PT(0.589)PAPFS(1)PFNPTSLIK 79.805 0.017908 19055000.0 57570.0 55863.0 52962.0 52143.0 54114.0 42884.0 50748.0 51544.0 74472.0 54153.0 True False 54376.47733705023 53179.25762792752 56376.015262196124 57098.655042635364 58372.46393345766 42616.34504898792 55878.10309275156 51365.20589446005 60949.76208634578 53673.24655039647 1.0131020728547409 0.9907963658951556 1.0503559759378798 1.063819662725686 1.0875523223408678 0.7939960369077603 1.04107924681405 0.956998303544592 1.135570624167797 1.0 15.71191553504443 -3.8143153252195607 16.32104684355416 1.0105354885616005 3.781189836548343 0.0 0.08785178847609076 11259.8349553067 1021501.6722150155 0.020990114302031706 37631.66275697079 0.0001533503158361082 3.8143153252195607 2.7706543479867425 SPT(ph)PAPFSPFNPTSLIK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTPAPFSPFNPTSLIK 17 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.128)PT(0.872)PAPFSPFNPTSLIK 159.81 2.3198000000000002e-07 114660000.0 58094.0 64570.0 57676.0 51539.0 44118.0 55879.0 37009.0 51287.0 77683.0 59206.0 True False 54871.410012482105 61467.96027845407 61393.88724486285 56437.2510642346 47589.835602917636 55530.23843373741 40750.23089303308 51109.09736747579 63577.7254290687 58681.48090157097 0.935072005161566 1.0474848169145048 1.0462225271349495 0.9617557395816115 0.8109855932699136 0.9462992000300865 0.6944308539415567 0.8709578657907991 1.0834376442494764 1.0 15.840617659258669 -5.541957334838957 9.166320601750447 0.88638380754305 1.0118887877885971 0.17651644695788493 0.10317243338693087 0.34291190535249505 148.3135749619769 0.030589043608089953 0.03997858389195191 2.8710626218329194e-06 5.541957334838957 0.12550498024554713 SPT(ph)PPPTLHLVPEPAAPPPPPPR ddPTM_KYSE-520_SHP099_60min_R1 2 SPTPPPTLHLVPEPAAPPPPPPR 23 0 A0A087WWH3;Q9NZM4-2;Q9NZM4 A0A087WWH3 GLTSCR1 Glioma tumor suppressor candidate region gene 1 protein 1 S(0.094)PT(0.904)PPPT(0.002)LHLVPEPAAPPPPPPR;S(0.199)PT(0.8)PPPT(0.001)LHLVPEPAAPPPPPPR 140.31 1.2858e-06 1405070000.0 600180.0 732290.0 503450.0 414910.0 553390.0 724120.0 464670.0 645430.0 704880.0 669770.0 True False 566886.8189708324 697109.6892103007 535903.1925484812 454342.92165276024 596938.6446416106 719600.4984813236 511643.378342179 643191.1539744937 576891.5605787878 663836.3588731757 0.8539556645151078 1.0501227898899732 0.8072820739408523 0.6844200616308233 0.8992255947759171 1.0840028402523845 0.7707372027809148 0.9689001594704363 0.869026760688475 1.0 19.340468123632327 -5.9942889815311835 24.999560765810514 0.9333814940423033 0.8517745328702515 0.1210469356775814 0.11327619979170969 388.79533546553216 1701906.1321601833 0.036432643679875656 0.04119464608686752 1.0132369488828047e-06 5.9942889815311835 -0.0816069611720518 SPTAALNES(ph)LVECPK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTAALNESLVECPK 15 0 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 1 SPTAALNES(1)LVECPK 158.58 1.3115e-05 0.0 140570.0 129710.0 107440.0 81784.0 75889.0 100600.0 81531.0 93866.0 107510.0 128980.0 True False 132772.3018806522 123478.53690132061 114365.75431007807 89556.72677074387 81861.03255065547 99972.11808432463 89772.94914588015 93540.40075448916 87988.89410655061 127837.33754492151 1.0386034661743215 0.965903540176052 0.8946193381874089 0.700552189920836 0.6403530777687687 0.7820259714748427 0.7022435766415607 0.7317142436701598 0.6882879117818899 1.0 16.96394974126702 -5.000758391079411 2.4984859251973055 0.7332801686390191 1.007670956835041 0.5374580888520344 0.09466040949163448 0.19326397846638663 2.4007959967248778 0.025090348931485037 0.0597026309503286 9.982552638307451e-06 5.000758391079411 0.2743907881960219 SPTAPSVFS(ph)PTGNR ddPTM_KYSE-520_SHP099_60min_R1 1 SPTAPSVFSPTGNR 14 0 H0Y3X6;A0A0C4DFX9;Q9H3P2;H7C2C7;C9JEM7;C9JHL4 H0Y3X6 NELFA Negative elongation factor A 1 SPTAPS(0.045)VFS(0.937)PT(0.019)GNR 69.045 0.023852 330390000.0 623410.0 417110.0 391070.0 310130.0 395430.0 477890.0 451290.0 525030.0 487530.0 497960.0 True False 588828.2045629757 397071.4095051261 416278.99793412315 339604.66195601557 426548.0913110685 474907.31124570535 496910.7973659621 523208.79347292375 399006.841631166 493548.4618070181 1.1930504299559803 0.8045236491090203 0.8434409792505685 0.6880877730073932 0.8642476358843413 0.9622303542532332 1.006812574284263 1.0600960877424497 0.8084451123002006 1.0 18.912832225128653 -6.279563203872589 5.581473947278065 0.9744627789076168 0.8617397863264009 0.09154169614240892 0.13423240889519084 0.3794722372266824 41.4007222866856 0.04745962674516652 0.04336707142157959 5.253355562575342e-07 6.279563203872589 -0.11272299258121588 SPTGS(ph)PSRLKS(ph)PSMAVPSPGWVAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SPTGSPSRLKSPSMAVPSPGWVASPK 26 2 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 3 S(0.077)PT(0.077)GS(0.424)PS(0.424)RLKS(0.493)PS(0.493)MAVPS(0.187)PGWVAS(0.826)PK 45.784 0.044275999999999996 787980000.0 373530.0 336900.0 363430.0 249400.0 310970.0 329110.0 282490.0 316900.0 435620.0 323910.0 True False 352809.54628640536 320714.8183027901 386857.2793085595 273102.901015156 335441.56982273195 327055.90241284395 311046.84603671875 315800.7478650164 356522.3890865558 321040.4093981665 1.098956816519747 0.998985825192577 1.2050111698828678 0.8506807648517648 1.0448577811483681 1.0187374948404604 0.9688713225223514 0.9836791214446413 1.1105218491183244 1.0 18.292395375426665 -5.248566222572569 24.99169350362527 0.997841273554747 1.090784703123644 0.2740113250717584 0.07719218624706156 1151.3681483788498 2235240.6550131626 0.020173502480030223 0.03466038793623923 5.642009036780608e-06 5.248566222572569 0.0929434295688969 SPTPKS(ph)PPSR ddPTM_KYSE-520_SHP099_60min_R1 1 SPTPKSPPSR 10 1 Q9NVD7-2;Q9NVD7 Q9NVD7-2 PARVA Alpha-parvin 1 S(0.025)PT(0.323)PKS(0.652)PPSR 62.162 0.022331 279180000.0 109330.0 114460.0 143340.0 70711.0 87131.0 76345.0 58877.0 53702.0 115070.0 74124.0 True False 103265.24695604829 108961.16979203734 152579.925752109 77431.35217996266 93987.71399242531 75868.50253626023 64828.86174414626 53515.72029614104 94176.18867864195 73467.31902759935 1.4055943285102699 1.4831243501767646 2.0768408017555333 1.0539564149724063 1.2793132407229546 1.032683695831596 0.8824176872412086 0.7284289260104465 1.2818786628550163 1.0 16.16481500824683 -5.362697326567954 8.965449223471548 1.0272693507120432 1.637208255518095 0.6109163405991017 0.22592083804130242 0.23598203483770708 19.129298474674577 0.06547779378656303 0.09719412486983961 4.338131110071905e-06 5.362697326567954 0.6099389048060517 SPTS(ph)PLNMK ddPTM_KYSE-520_SHP099_60min_R1 6 SPTSPLNMK 9 0 A0A0A0MRP6;B7ZLQ5;P28370-2;P28370 A0A0A0MRP6 SMARCA1 Probable global transcription activator SNF2L1 1 SPT(0.031)S(0.969)PLNMK;SPT(0.022)S(0.978)PLNMK;SPT(0.002)S(0.998)PLNMK;S(0.001)PT(0.038)S(0.961)PLNMK;SPT(0.006)S(0.994)PLNMK;SPT(0.027)S(0.973)PLNMK 194.49 3.7352e-06 12571760000.0 15498200.0 15968300.0 12748300.0 10551700.0 11262000.0 14880000.0 11948300.0 14232500.0 15667800.0 15481700.0 True False 14638483.951104261 15201158.899093052 13570075.816001179 11554530.395515712 12148255.327985384 14787128.400544263 13156150.768170623 14183130.779390471 12822922.473096594 15344544.182580326 0.9539862362104174 0.9906556179329166 0.8843583526844944 0.7530057757357711 0.7916986769653619 0.9636733567707498 0.8573829637185284 0.9243109870602522 0.83566656138627 1.0 23.87122245466904 -9.570755808880477 20.06738237738179 0.9999999418491577 0.8832147445037603 0.18639258042137352 0.0727829783555868 0.0 0.0 0.07613962299849363 0.01846657105397041 2.686854761076609e-10 9.570755808880477 -0.1167851973453975 SPTTTQS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SPTTTQSPK 9 0 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 SPTTT(0.017)QS(0.983)PK;S(0.008)PT(0.045)T(0.029)T(0.051)QS(0.866)PK 125.46 0.00078213 1104300000.0 2092920.0 1659410.0 1433530.0 1406750.0 1460290.0 2025540.0 1948490.0 1139590.0 1792240.0 2042290.0 True False 1976821.5554674144 1579689.4527748106 1525937.6375290966 1540447.0970451913 1575206.5150864634 2012897.8535240877 2145462.38462985 1135637.0282723065 1466814.3946937441 2024196.8994775792 0.9765954863272482 0.7804030591996803 0.7538484215260495 0.761016429499898 0.7781883844862154 0.9944180104433479 1.0599079492630228 0.5610309098711695 0.7246401746155778 1.0 20.948918201294862 -11.404096346281955 2.3247811175051947 2.571286462314935 0.8193811679210236 0.1258532695054172 0.14136661895717986 11184469.256783657 1080809.1246554295 94682079.84617443 0.03937447311520167 3.94369803198878e-12 11.404096346281955 -1.7519052943939113 SPTTVLFTSS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 2 SPTTVLFTSSPIK 13 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 SPTTVLFTS(0.002)S(0.998)PIK;SPTTVLFTS(0.018)S(0.982)PIK 263.12 4.0534e-22 547480000.0 1277420.0 1338140.0 969220.0 751270.0 899070.0 1363270.0 915840.0 1073390.0 1318280.0 1310240.0 True False 1206558.966126362 1273853.7458109118 1031697.4720068302 822670.4749224376 969821.6939914589 1354761.3262506688 1008422.0449370526 1069666.6606211106 1078913.5831344398 1298632.292951295 0.9290997711017294 0.9809195048707198 0.794449266052191 0.633489925814814 0.7468023852906236 1.0432216521982631 0.7765262348784618 0.82368709482048 0.8308076034998957 1.0 20.30856155959231 -10.002440785013961 15.193400896766583 0.9999923807254835 0.8375325414271801 0.15352597966238124 0.11266436820920832 0.0 0.0 0.11658316245301574 0.028275570174254524 9.943956481146629e-11 10.002440785013961 -0.16245983929830332 SPVDES(ph)GDEVQYGDVPVENGMAPFFEMK ddPTM_KYSE-520_SHP099_60min_R1 6 SPVDESGDEVQYGDVPVENGMAPFFEMK 28 0 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-4;D6R9F5;F8WA26 Q8WX93-3 PALLD Palladin 1 S(0.167)PVDES(0.833)GDEVQY(0.001)GDVPVENGMAPFFEMK;S(0.044)PVDES(0.956)GDEVQYGDVPVENGMAPFFEMK;SPVDES(1)GDEVQYGDVPVENGMAPFFEMK;S(0.005)PVDES(0.991)GDEVQY(0.005)GDVPVENGMAPFFEMK;SPVDES(1)GDEVQYGDVPVENGMAPFFEMK;S(0.201)PVDES(0.796)GDEVQY(0.003)GDVPVENGMAPFFEMK 207.13 5.5767e-17 712826000.0 610701.0 610042.0 474108.0 469269.0 500551.0 582910.0 522350.0 580183.0 686285.0 598485.0 True False 576824.1981277391 580734.6666282892 504669.7602796209 513868.18466913095 539941.5159543955 579271.8424705139 575154.2356447299 578170.4805887308 561672.9438369845 593182.8885142849 0.9724221809103116 0.9790145297057133 0.8507827350577183 0.8662896294196728 0.910244591354885 0.9765484704411935 0.9696069235666753 0.9746917717684761 0.9468798826004207 1.0 19.178117455554293 -6.260140299737165 24.63896302153292 0.9717174916063133 0.9129082142026056 0.34995221993378745 0.03924967042798365 123.3937845294584 2340361.7743669 0.014768503254533088 0.014002357975558247 5.493633722061238e-07 6.260140299737165 -0.05880927740370767 SPVDIVTGGIS(ph)PVRDLDR ddPTM_KYSE-520_SHP099_60min_R1 6 SPVDIVTGGISPVRDLDR 18 1 E9PEM5;A0A494C1L5;P50851-2;P50851;A0A494C0R9;H0YAC6;A0A494BZW2;H0Y9N9 E9PEM5 LRBA Lipopolysaccharide-responsive and beige-like anchor protein 1 SPVDIVTGGIS(1)PVRDLDR;SPVDIVTGGIS(1)PVRDLDR;SPVDIVTGGIS(1)PVRDLDR;SPVDIVTGGIS(1)PVRDLDR;SPVDIVTGGIS(1)PVRDLDR;SPVDIVTGGIS(1)PVRDLDR 218.69 1.6454e-18 1075272000.0 992222.0 1037363.0 875100.0 705912.0 791015.0 907288.0 749033.0 811970.0 1119428.0 898188.0 True False 937181.4677144814 987526.5243663911 931510.346209507 773001.6642398179 853263.380240308 901625.2790506043 824752.5654976154 809153.4655852222 916168.0936834506 890230.753099689 1.0527399378771347 1.109292754634603 1.0463695429146733 0.8683160647374943 0.9584743924755862 1.0127995195753918 0.9264480727338552 0.9089255373034865 1.029135525248314 1.0 19.76381981411496 -5.049143857974338 8.740935946694186 0.9550061909693117 1.0803217451784861 0.5404637844756932 0.047882875889280516 0.2597481575916536 44.374412186678875 0.01276824762137912 0.022366228562271172 8.930096295582074e-06 5.049143857974338 0.1253155542091744 SPVFS(ph)DEDS(ph)DLDFDISK ddPTM_KYSE-520_SHP099_60min_R1 1 SPVFSDEDSDLDFDISK 17 0 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 2 SPVFS(1)DEDS(1)DLDFDISK 171.25 2.6354000000000002e-08 115430000.0 376020.0 369790.0 342520.0 372000.0 347940.0 368490.0 367130.0 467230.0 527430.0 358680.0 True False 355161.4210227134 352024.7333338936 364599.3872513767 407354.7681541221 375320.8984922062 366190.1172255751 404243.08324351476 465609.2881823016 431662.0074283143 355502.37424881716 0.9990409256004994 0.9902176717602185 1.0255891765048875 1.1458566739951315 1.0557479377887866 1.0300637738336946 1.1371037509881265 1.309722021311791 1.2142310113692596 1.0 18.439499669458876 -6.929374903006024 4.45201181740637 1.2014055778254538 1.0442026488734286 0.3407944579207107 0.08291413975973466 0.20171824560779628 7.73445174806122 0.03612764690338781 0.0235199475554562 1.1765898484347328e-07 6.929374903006024 -0.15720292895202514 SPVFS(ph)DEDS(ph)DLDFDISKLEQQSK ddPTM_KYSE-520_SHP099_60min_R1 1 SPVFSDEDSDLDFDISKLEQQSK 23 1 U3KQ48;O00566 U3KQ48 MPHOSPH10 U3 small nucleolar ribonucleoprotein protein MPP10 2 S(0.012)PVFS(0.989)DEDS(0.998)DLDFDIS(0.001)KLEQQSK 60.602 0.01937 0.0 68236.0 74846.0 58971.0 61757.0 68757.0 69092.0 51162.0 55291.0 92160.0 54915.0 True False 64450.813054906386 71250.28581386362 62772.365016936055 67626.36671208087 74167.78472618456 68660.7711996239 56333.95425300221 55099.20842601639 75426.0671645401 54428.495823223486 1.1841373177799006 1.309062187668663 1.1532996469498689 1.2424809043358889 1.3626646043475399 1.2614857375927666 1.035008471223739 1.0123228208431718 1.3857826865088085 1.0 15.732074546085327 -6.743707171185355 24.666139901101786 1.1093054031047498 1.2548590676124252 0.2712863575223108 0.11549288178005519 278.1990960292676 386984.8311908976 0.043465189012049 0.03359149097914018 1.8042338594314535e-07 6.743707171185355 0.14555366450767537 SPVGS(ph)GAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKK ddPTM_KYSE-520_SHP099_60min_R1 1 SPVGSGAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKK 52 1 P16989-2;P16989;P16989-3 P16989-2 YBX3 Y-box-binding protein 3 1 S(0.485)PVGS(0.515)GAPQAAAPAPAAHVAGNPGGDAAPAATGTAAAASLATAAGSEDAEKK 48.798 0.019607 271590000.0 140440.0 136510.0 115700.0 101010.0 112540.0 125270.0 120310.0 145920.0 157910.0 142960.0 True False 132649.5132398008 129951.85469431261 123158.20712654536 110609.96003023617 121396.25773499135 124488.14346345291 132472.10891244857 145413.83757798412 129237.52458715852 141693.48562119712 0.9361722781979235 0.9171335868024693 0.8691875041862975 0.780628407476265 0.8567525684245759 0.8785735132260003 0.9349202493797002 1.0262563373360225 0.9120922110185198 1.0 17.112413906101118 -6.884094197595448 3.2381107903434145 0.9777601991579922 0.8694182577636264 0.5099033538615891 0.0470603991865717 0.21577258720885956 4.465962513859921 0.023216186035675795 0.01483111987669968 1.3058876130278899e-07 6.884094197595448 -0.10834194139436581 SPVPSPGS(ph)SSPQLQVK ddPTM_KYSE-520_SHP099_60min_R1 2 SPVPSPGSSSPQLQVK 16 0 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 SPVPS(0.004)PGS(0.773)S(0.172)S(0.052)PQLQVK;SPVPSPGS(0.743)S(0.129)S(0.129)PQLQVK 166.52 5.7893e-07 1339410000.0 2180000.0 2607700.0 2148900.0 1632400.0 1952540.0 2285100.0 1894020.0 2640000.0 2843100.0 2435100.0 True False 2059071.0542777402 2482422.1777624977 2287421.532361566 1787542.8052010445 2106193.7895670906 2270837.843285194 2085486.0254538774 2630842.4561806293 2326864.708718575 2413526.908479134 0.8531378071832845 1.028545473862886 0.9477505820736706 0.7406351256831237 0.8726622364008748 0.9408794388441875 0.8640823593585003 1.0900406566581167 0.9640931288331198 1.0 21.202711480843792 -7.25024947443599 24.802920853116262 1.0203001720560265 0.8951366099694893 0.36200215671582714 0.07628742044597386 735.6074935741472 1630511.4599505677 0.03805292609226974 0.021719825198563806 5.6201838878490405e-08 7.25024947443599 -0.12516356208653723 SPVPSPGSSS(ph)PQLQVK ddPTM_KYSE-520_SHP099_60min_R1 4 SPVPSPGSSSPQLQVK 16 0 Q8N3F8 Q8N3F8 MICALL1 MICAL-like protein 1 1 SPVPSPGS(0.029)S(0.433)S(0.538)PQLQVK;SPVPSPGSS(0.061)S(0.939)PQLQVK;SPVPSPGS(0.014)S(0.103)S(0.883)PQLQVK;SPVPSPGS(0.011)S(0.424)S(0.565)PQLQVK 294.17 1.6369000000000002e-37 24194400000.0 16119000.0 20313800.0 13713100.0 12418400.0 13207500.0 19556900.0 12587300.0 17733400.0 20533100.0 18589900.0 True False 15224846.937570121 19337894.556364547 14597068.367735775 13598641.002271894 14246855.109604571 19434838.132836286 13859747.124209648 17671886.97440669 16804806.637328748 18425207.948723353 0.8263052976085961 1.0495346706632114 0.7922335752388172 0.7380454559924854 0.7732262859259457 1.054796135105921 0.7522165916813961 0.9591146555081969 0.9120551954743675 1.0 24.135177566023007 -6.221891832194973 24.999670615567883 0.92161766355923 0.8398805498766655 0.1712270608527917 0.10737647095129679 1238.8592246257726 783135.2612238287 0.03647763458318152 0.03647705855281864 5.99940482170198e-07 6.221891832194973 -0.08173711368256453 SPVS(ph)PLAAQGIPLPAQLTK ddPTM_KYSE-520_SHP099_60min_R1 1 SPVSPLAAQGIPLPAQLTK 19 0 K7EIF1;K7EPF0;K7EQS3;K7EM48;K7EN63;Q96SI1-2;Q96SI1 K7EIF1 KCTD15 BTB/POZ domain-containing protein KCTD15 1 S(0.157)PVS(0.843)PLAAQGIPLPAQLTK 328.17 3.1229e-54 730080000.0 532020.0 572500.0 434100.0 302530.0 381290.0 485970.0 344310.0 424830.0 606240.0 501980.0 True False 502507.7900444237 544996.2406599802 462082.78058455745 331282.3602410388 411295.35375666374 482936.88096858084 379116.2149417768 423356.3638860673 496162.09806674067 497532.847734531 1.0099992238352618 1.0953975061979713 0.9287482880549655 0.6658502282804077 0.8266697477954641 0.970663310307226 0.7619923321003765 0.8509113836679943 0.9972449061925622 1.0 18.92443225175004 -4.947835771495012 5.851873569880397 0.855063898565965 1.0472505815064557 0.335058181168452 0.10186811872850321 0.19946722010119525 14.926571480244474 0.026868025256290683 0.056773899646355847 1.1276237866180283e-05 4.947835771495012 0.19218668294049068 SPVTT(ph)LLECMHK ddPTM_KYSE-520_SHP099_60min_R1 1 SPVTTLLECMHK 12 0 A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-5;P55265-3;P55265-2;P55265;P55265-4 A0A3B3ITG9 ADAR Double-stranded RNA-specific adenosine deaminase 1 SPVT(0.157)T(0.842)LLECMHK 92.11200000000001 0.007999 113230000.0 100820.0 95329.0 101820.0 110820.0 99801.0 104880.0 98081.0 112570.0 118850.0 112770.0 True False 95227.31362031284 90749.25174825381 108383.48011776016 121352.29948075191 107654.77090998644 104225.40501673936 107995.98465831495 112179.52094403545 97269.8359646874 111770.9455337323 0.8519862936255951 0.8119216609907431 0.9696927909145243 1.0857231179468547 0.9631731251436573 0.9324910379798504 0.9662259198274558 1.0036554706444694 0.8702604733296411 1.0 16.770185687823798 -4.768013644861877 24.348257811332086 0.9758905441557179 0.8319539594810159 0.5389455498586238 0.05249068461019258 73.83485677604709 273458.3127840647 0.013931311124722685 0.030164724105203013 1.7060287873714595e-05 4.768013644861877 -0.14393658467470194 SPYIDGCS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 3 SPYIDGCSPIK 11 0 A0A087WV86;Q6PGQ7;Q6PGQ7-2 A0A087WV86 BORA Protein aurora borealis 1 SPYIDGCS(1)PIK;SPYIDGCS(1)PIK;SPYIDGCS(0.999)PIK 105.65 0.0012357999999999998 1503940000.0 1635890.0 1332560.0 1307120.0 1091350.0 1267810.0 1662920.0 1356100.0 1481430.0 1437200.0 1694330.0 True False 1545143.9206341326 1268541.817386662 1391379.0466659465 1195071.575873657 1367579.434147856 1652541.0994511447 1493187.8222605884 1476291.2650983615 1176240.708863683 1679319.5543687947 0.9201011901602643 0.755390368727927 0.828537393640321 0.7116403621720752 0.8143652175013752 0.9840539849321798 0.8891624100821195 0.8791008603798784 0.7004269710333935 1.0 20.679445353284127 -6.0253822626602735 24.24449638193736 0.88471751994043 0.7973088221530303 0.17622861413015167 0.09073121012438615 917.1867062307981 876072.09032327 0.029495535912033414 0.029628018499372688 9.432302867617848e-07 6.0253822626602735 -0.08740869778739968 SPYKFPS(ph)SPLR ddPTM_KYSE-520_SHP099_60min_R1 1 SPYKFPSSPLR 11 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 S(0.299)PY(0.003)KFPS(0.399)S(0.299)PLR 50.563 0.051786 1750800000.0 1568300.0 1542800.0 1214400.0 842900.0 951080.0 1263700.0 1139800.0 1136700.0 1392400.0 1067700.0 True False 1481303.272671458 1468681.5722099885 1292682.1671086997 923008.9625728733 1025924.5850950393 1255812.7795542858 1255022.1073760209 1132757.0530077755 1139575.2595475886 1058241.0086580294 1.3997787465729759 1.3878516899212257 1.2215385309514404 0.8722105409082136 0.969462132634634 1.186698275043036 1.1859511180421296 1.0704150035200781 1.0768579654578878 1.0 20.01323680017793 -4.955860809579763 4.022319295008752 1.060852448015621 1.3883054756746913 0.6981879234619641 0.09010308909070418 0.12953174373496157 4.491107059177301 0.026969665679506045 0.05870109557668108 1.1069785112927928e-05 4.955860809579763 0.32745302765907036 SPYKFPSS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 2 SPYKFPSSPLR 11 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 S(0.018)PYKFPS(0.132)S(0.85)PLR;S(0.199)PYKFPS(0.199)S(0.601)PLR 49.298 0.055264999999999995 2611720000.0 2366310.0 2515400.0 1681140.0 1537300.0 1755470.0 1975190.0 1636020.0 1854650.0 2141910.0 1785010.0 True False 2235046.0671779653 2394556.408307627 1789508.9743191062 1683404.529793902 1893615.501742006 1962862.1065504716 1801404.867616523 1848216.6520285648 1752993.1371571182 1769196.200116764 1.2633115914619621 1.3534713719990976 1.0114813575797876 0.951508108418275 1.0703253271836275 1.1094654772720662 1.0182052547352483 1.0446646063939011 0.9908415680756173 1.0 20.75466261805333 -4.764992185777803 24.999985463241043 1.0279872566374348 1.3083915304826639 0.8589309242995022 0.04599353810875465 28.375027575514263 199672.19758746863 0.01248029582537693 0.02772974221841558 1.7179392976093218e-05 4.764992185777803 0.28040427384522904 SPYQEFTDHLVK ddPTM_KYSE-520_SHP099_60min_R1 2 SPYQEFTDHLVK 12 0 P15880;H0YEN5;E9PQD7 P15880 RPS2 40S ribosomal protein S2 0 ; 150.21 3.1471e-05 306250000.0 422330.0 358610.0 268440.0 286450.0 393110.0 356590.0 292760.0 305100.0 269960.0 309780.0 False True 398902.5130060173 341381.8373154164 285744.07191918616 313674.1218756672 424045.5205100635 354364.3895396559 322355.03786225955 304041.6793108754 220942.06913779554 307035.5902051931 1.2992061042155705 1.1118640581284716 0.9306545593890997 1.0216213751182315 1.381095658085345 1.1541475999666122 1.04989469672499 0.9902489776761162 0.7195975847299627 1.0 18.228046370542142 -7.300985228442361 2.280071119766973 0.8641432391326807 1.1391144947683796 0.3966701719837311 0.137678600190943 0.3453573634537512 3.400316116349337 0.10143454895812594 0.04129287290741876 5.000515428250591e-08 7.300985228442361 0.2749712556356989 SQAAPGSS(ph)PCR ddPTM_KYSE-520_SHP099_60min_R1 4 SQAAPGSSPCR 11 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 SQAAPGS(0.221)S(0.779)PCR;SQAAPGS(0.395)S(0.605)PCR;SQAAPGS(0.01)S(0.99)PCR;SQAAPGS(0.034)S(0.966)PCR 180.61 3.4273e-06 2014140000.0 2337500.0 2257150.0 2120490.0 1626610.0 1850380.0 1997820.0 1781980.0 1878240.0 2270120.0 1921220.0 True False 2207834.2153092735 2148713.125948778 2257180.178303961 1781202.5253418712 1995994.378777975 1985350.8643262996 1962119.9288488512 1871724.8238245107 1857923.4330682082 1904199.485486542 1.1594553155470209 1.1284075761630405 1.1853695978324608 0.9354075236958465 1.0482065529326505 1.0426170574345168 1.0304172140596446 0.982945767022023 0.9756978967954558 1.0 20.860753193792892 -5.251775854130759 24.999899998281446 1.0062526089441068 1.1548105129475397 0.8104274936965485 0.03442950807371625 298.61148183552217 772517.6890151323 0.009610143380525888 0.01637612903625366 5.600465753198753e-06 5.251775854130759 0.14855790400343283 SQANGAGALSYVS(ph)PNTSK ddPTM_KYSE-520_SHP099_60min_R1 6 SQANGAGALSYVSPNTSK 18 0 A0A494C0Q6;A0A494C0K5;A0A494C0W0;O95453-2;O95453-3;O95453;F5H1Z4;A0A494C002;A0A494C156;A0A494C1G3;A0A494BZU6;A0A494BZW7;A0A494C0P9;A0A494C1K5;A0A494C1N1;A0A494C0Q2 A0A494C0Q6;A0A494C0Q2 PARN Poly(A)-specific ribonuclease PARN 1 SQANGAGALSYVS(1)PNTSK;SQANGAGALSYVS(1)PNTSK;SQANGAGALSYVS(1)PNTSK;SQANGAGALSYVS(1)PNTSK;SQANGAGALSYVS(1)PNTSK;SQANGAGALSYVS(1)PNTSK 475.41 1.1654999999999997e-137 7481130000.0 4042530.0 5273440.0 3623780.0 3043110.0 3171610.0 4903990.0 3635370.0 4426020.0 5038630.0 4737410.0 True False 3818282.802316236 5020096.0268051885 3857374.6570530008 3332326.2594556143 3421197.6630076086 4873382.379367271 4002868.6773921405 4410667.169660837 4123741.805525897 4695440.233049203 0.8131895227716819 1.0691427805790972 0.8215150157598822 0.709694106209848 0.7286212779213451 1.0378967972088347 0.8525012520056487 0.9393511472291843 0.8782439134249087 1.0 22.162828997120634 -6.261634054239256 24.99999996367188 0.9322394788137114 0.8348244488232082 0.22581007623520144 0.10371415461920645 35.88028747629187 4607551.852859696 0.03807994473731411 0.03568788031257627 5.474770844184436e-07 6.261634054239256 -0.09741502999050322 SQAPLES(ph)SLDSLGDVFLDS(ph)GRK ddPTM_KYSE-520_SHP099_60min_R1 1 SQAPLESSLDSLGDVFLDSGRK 22 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 2 SQAPLES(0.554)S(0.446)LDSLGDVFLDS(1)GRK 188.26 9.4655e-14 357220000.0 709500.0 643450.0 602710.0 620230.0 578930.0 599700.0 535150.0 636580.0 777120.0 645150.0 True False 670142.6206468154 612537.6961618599 641561.6509700964 679176.4727210512 624488.4973388888 595957.0498525794 589248.1845606923 634371.8525588897 636014.5976009914 639434.4729191043 1.048023916489088 0.9579366175951431 1.0033266552572326 1.062151794257384 0.976626259275661 0.9320064449011568 0.9215145718852085 0.9920826596396921 0.9946517188813723 1.0 19.286436998612793 -5.9821027801049835 24.995773774458534 0.9634997787725061 1.0133974060092217 0.3032294574072715 0.035535310537943184 316.59167143379926 442158.9028993822 0.011475868207442638 0.013010170019110829 1.0420707838022297e-06 5.9821027801049835 0.049897627236715536 SQAPLES(ph)SLDSLGDVFLDSGRK ddPTM_KYSE-520_SHP099_60min_R1 5 SQAPLESSLDSLGDVFLDSGRK 22 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 SQAPLES(0.5)S(0.5)LDSLGDVFLDSGRK;SQAPLES(0.5)S(0.5)LDSLGDVFLDSGRK;SQAPLES(0.498)S(0.498)LDS(0.004)LGDVFLDSGRK;SQAPLES(0.615)S(0.385)LDSLGDVFLDSGRK;SQAPLES(0.597)S(0.403)LDSLGDVFLDSGRK 202.17 2.5697000000000004e-14 913885000.0 698790.0 610113.0 577540.0 418731.0 552039.0 553381.0 457455.0 474395.0 748739.0 525213.0 True False 660026.7256966702 580802.2556817166 614769.152496673 458527.0683439341 595481.3286277498 549927.1439127408 503699.01573056396 472749.4344696252 612786.8717742035 520560.02142953133 1.2679166638347363 1.1157258179119318 1.18097650067024 0.8808341967651568 1.143924435442572 1.0564144791652712 0.9676098720515174 0.9081554768101255 1.177168523413312 1.0 18.989704992671214 -4.294891070767932 0.9329115055070513 1.0196247652364077 1.3802432165739953 0.37489176114267597 0.09620898191818235 2.12518216805472 1.52269778619884 0.03251772922062417 0.7720768627373844 5.0711788703766945e-05 4.294891070767932 0.36061845133758763 SQAPLESS(ph)LDSLGDVFLDS(ph)GRK ddPTM_KYSE-520_SHP099_60min_R1 7 SQAPLESSLDSLGDVFLDSGRK 22 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 2 S(0.011)QAPLES(0.239)S(0.689)LDS(0.065)LGDVFLDS(0.998)GRK;SQAPLES(0.456)S(0.544)LDSLGDVFLDS(1)GRK;S(0.001)QAPLES(0.458)S(0.542)LDSLGDVFLDS(1)GRK;SQAPLES(0.465)S(0.535)LDSLGDVFLDS(1)GRK;SQAPLES(0.437)S(0.563)LDSLGDVFLDS(1)GRK;SQAPLES(0.152)S(0.848)LDSLGDVFLDS(1)GRK;S(0.001)QAPLES(0.469)S(0.529)LDS(0.001)LGDVFLDS(1)GRK 228.84 2.7335e-20 1052065000.0 2305028.0 1970635.0 2139625.0 2003924.0 1763922.0 1821426.0 1851957.0 2029532.0 2436319.0 2040649.0 True False 2177163.5018806 1875962.7366165614 2277548.651021042 2194376.3344582785 1902732.6260567035 1810057.8047103293 2039170.8869185555 2022492.0271883316 1993944.8842040508 2022570.4374609 1.0764339582723128 0.927514168046287 1.126066419659647 1.0849443331195232 0.9407497463699515 0.8949294280117357 1.0082076001657057 0.9999612323649569 0.9858469437075401 1.0 20.94775851574013 -5.764125803987237 24.999973897685372 0.9696091531498795 1.049889803740452 0.329820697771529 0.057201731839509336 91.66698234287846 853060.3099102312 0.018234157749556425 0.02163179457120938 1.7213698659994739e-06 5.764125803987237 0.08028065059057254 SQAPLESS(ph)LDSLGDVFLDSGR ddPTM_KYSE-520_SHP099_60min_R1 8 SQAPLESSLDSLGDVFLDSGR 21 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 SQAPLES(0.033)S(0.967)LDSLGDVFLDSGR;SQAPLES(0.045)S(0.955)LDSLGDVFLDSGR;SQAPLES(0.026)S(0.974)LDSLGDVFLDSGR;SQAPLES(0.29)S(0.71)LDSLGDVFLDSGR;SQAPLES(0.038)S(0.962)LDSLGDVFLDSGR;SQAPLES(0.006)S(0.994)LDSLGDVFLDSGR;SQAPLES(0.159)S(0.841)LDSLGDVFLDSGR;SQAPLES(0.039)S(0.961)LDSLGDVFLDSGR 277.25 3.798e-36 961892000.0 813929.0 955673.0 752626.0 603405.0 751967.0 852213.0 664639.0 807405.0 982607.0 814535.0 True False 768778.7358427652 909761.0345855824 801141.4762041777 660752.4297796711 811142.5247930365 846894.022554639 731827.1963715473 804604.3005047428 804190.3383067194 807318.8535986412 0.9522615908397498 1.1268918476637861 0.9923482805251881 0.8184528663419081 1.0047362590101188 1.0490204939220615 0.9064909027076622 0.996637570048317 0.9961248083356702 1.0 19.622779058289964 -4.988873126023655 24.826752814563935 0.9646951920850007 1.0445875788402448 0.1344939011417312 0.07213961961894003 352.0992757174297 785605.8431598358 0.018735394021784993 0.03894816898256651 1.0259516020549395e-05 4.988873126023655 0.07989238675524413 SQAPLESSLDSLGDVFLDS(ph)GRK ddPTM_KYSE-520_SHP099_60min_R1 8 SQAPLESSLDSLGDVFLDSGRK 22 1 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 SQAPLESSLDSLGDVFLDS(1)GRK;SQAPLESSLDSLGDVFLDS(1)GRK;SQAPLESSLDSLGDVFLDS(1)GRK;SQAPLESSLDSLGDVFLDS(1)GRK;SQAPLESSLDSLGDVFLDS(1)GRK;SQAPLESSLDSLGDVFLDS(1)GRK;SQAPLESSLDSLGDVFLDS(1)GRK;SQAPLESSLDSLGDVFLDS(1)GRK 265.78 3.3089999999999995e-36 1925678000.0 1116729.1 902624.3 830129.5 767889.8 753548.9 782949.4 748631.8 765460.7 971862.5 795045.4 True False 1054781.9106787299 859260.8737613037 883640.9758241615 840869.8157175122 812848.911323256 778062.7223742667 824310.8082862814 762805.4954915701 795396.7686599168 788001.916291961 1.3385524690626829 1.0904299291614168 1.1213690697381065 1.0670910797708812 1.0315316429028696 0.9873868404223376 1.0460771620520624 0.9680249244583621 1.0093843075950286 1.0 19.587839612521442 -1.0000000000065974 0.5836790733817383 1.0037836004311682 18.79335813454983 0.8961033249699814 0.032692923817620664 45.25495717611455 0.3715239866085799 0.014815863767568256 1021.3586664282471 0.0999999999984809 1.0000000000065974 17.789574534118664 SQASMVINS(ph)DT(ph)DDEEEVSAALTLAHLK ddPTM_KYSE-520_SHP099_60min_R1 8 SQASMVINSDTDDEEEVSAALTLAHLK 27 0 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 2 SQASMVINS(1)DT(1)DDEEEVSAALTLAHLK;SQASMVINS(1)DT(1)DDEEEVSAALTLAHLK;SQASMVINS(1)DT(1)DDEEEVSAALTLAHLK;SQAS(0.002)MVINS(0.989)DT(0.963)DDEEEVS(0.042)AALT(0.004)LAHLK;SQASMVINS(1)DT(1)DDEEEVSAALTLAHLK;SQASMVINS(1)DT(1)DDEEEVSAALTLAHLK;SQAS(0.001)MVINS(0.999)DT(1)DDEEEVSAALTLAHLK;S(0.005)QAS(0.005)MVINS(0.984)DT(0.984)DDEEEVS(0.016)AALT(0.006)LAHLK 282.74 1.0392e-51 844022000.0 1182029.0 1303959.0 1203489.0 1166914.0 1132019.0 1143858.0 1105327.0 1219492.0 1607529.0 1208541.0 True False 1116459.4950536068 1241314.8523576392 1281067.8265904847 1277817.1557145133 1221102.4549929553 1136718.7579294178 1217064.2401119599 1215261.8668835717 1315642.2561083566 1197834.2669706712 0.9320650826571679 1.0362993333768373 1.069486707731539 1.066772917547366 1.019425214876453 0.9489783263624484 1.016053951428457 1.014549258101436 1.0983508256410317 1.0 20.191996879153777 -4.258919823797798 23.97451725105401 1.0295317515411522 0.9320650194840748 0.35562746588049143 0.03954037892970617 158.9768319871072 1512555.706503879 0.010475916420123946 0.06839225584493283 5.509093917935134e-05 4.258919823797798 -0.09746673205707734 SQASMVINS(ph)DTDDEEEVSAALTLAHLK ddPTM_KYSE-520_SHP099_60min_R1 2 SQASMVINSDTDDEEEVSAALTLAHLK 27 0 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.009)QAS(0.025)MVINS(0.752)DT(0.209)DDEEEVS(0.006)AALTLAHLK;SQASMVINS(0.989)DT(0.011)DDEEEVSAALTLAHLK 185.7 2.0455e-15 72014000.0 65176.0 71804.0 61891.0 53228.0 60355.0 66384.0 55281.0 55826.0 95296.0 59647.0 True False 61560.55735486517 68354.42805999868 65880.59288910127 58286.77311641824 65104.595127025146 65969.67283210544 60869.34297056829 55632.35263588633 77992.64861666688 59118.57398466377 1.0413065337271985 1.1562259278738831 1.114380615915933 0.9859299571660624 1.1012544914211604 1.1158874171968178 1.0296145334351043 0.941030016223297 1.319257948219443 1.0 15.851323849810475 SQATS(ph)PGQTNGDSSLEVLATR ddPTM_KYSE-520_SHP099_60min_R1 4 SQATSPGQTNGDSSLEVLATR 21 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9K0F0;A0A087WVI1;C9J0X3;C9J760;Q96JY6-2 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 S(0.003)QAT(0.047)S(0.94)PGQT(0.011)NGDSSLEVLATR;SQAT(0.022)S(0.978)PGQTNGDSSLEVLATR;SQATS(1)PGQTNGDSSLEVLATR;SQAT(0.001)S(0.999)PGQTNGDSSLEVLATR 412.09 1.1564999999999995e-107 1940090000.0 1691360.0 2239040.0 1553380.0 1085490.0 1337990.0 1951290.0 1449160.0 1777180.0 2090840.0 2013100.0 True False 1597536.8891574324 2131473.1575324424 1653513.360295876 1188654.6432355314 1443282.2008782746 1939111.2753157238 1595655.2352386676 1771015.37737693 1711196.1617871872 1995265.500168103 0.8006638159296787 1.0682654300156365 0.8287184638618599 0.5957375813571608 0.7233534588538101 0.9718562643178824 0.7997207565129714 0.8876088807367843 0.8576283014180405 1.0 20.928149300879767 -8.456174015319032 0.7413916643878786 1.001010695677619 0.82669597815193 0.1502457571013247 0.12105462499127398 3.351490160469277 3.1907982814424973 0.14123987775425814 0.047731479020194666 3.498049773091063e-09 8.456174015319032 -0.17431471752568906 SQDADS(ph)PGSSGAPENLTFK ddPTM_KYSE-520_SHP099_60min_R1 2 SQDADSPGSSGAPENLTFK 19 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;H0Y948;H0Y8L4;H0Y8U8 A8MQ02 MLLT4 Afadin 1 SQDADS(1)PGSSGAPENLTFK;SQDADS(1)PGSSGAPENLTFK 290.94 1.7785999999999997e-39 730050000.0 1419670.0 1515920.0 1139220.0 1010950.0 1105290.0 1433080.0 1165250.0 1447380.0 1738820.0 1480030.0 True False 1340918.0750580165 1443092.9277576911 1212655.9440164482 1107030.3840467983 1192270.034760164 1424135.6161459647 1283044.8417440841 1442359.3766010313 1423094.1200851297 1466918.0856459173 0.9141056260599444 0.9837583583423232 0.8266691616134028 0.7546640776191315 0.8127720602989092 0.9708351339324346 0.8746533663324019 0.9832582955481988 0.9701251446896635 1.0 20.484356880872674 -7.105873390868169 1.21783454487668 0.9926825523342929 0.8654700726521063 0.35743386123557186 0.06610542068407553 0.6174846672360949 1.6738944660177355 0.05894130233131937 0.02521048944806335 7.836580679724051e-08 7.105873390868169 -0.12721247968218663 SQDATFS(ph)PGSEQAEK ddPTM_KYSE-520_SHP099_60min_R1 2 SQDATFSPGSEQAEK 15 0 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDATFS(1)PGSEQAEK;SQDATFS(0.999)PGS(0.001)EQAEK 297.36 3.8714e-36 227270000.0 909880.0 971930.0 772170.0 677450.0 711060.0 928220.0 716630.0 853390.0 973120.0 917580.0 True False 859407.1425991881 925237.0239033267 821945.313715684 741834.6443172308 767016.3766220284 922426.6346742727 789073.954034811 850429.7892727236 796425.9383589115 909450.9550664369 0.9449735995234697 1.0173578011534845 0.9037819017471256 0.8156950522560489 0.8433839915710426 1.0142675968786992 0.8676377210216552 0.935102420350527 0.8757217021128219 1.0 19.794636312654102 -5.485437603898311 0.0017797502280668502 1.8331517318501882 2.0169905560151174e-07 0.010359182208741324 0.06841748265360546 2107768.6411047555 937.3760600008792 478908.9938459311 486598.8181581708 3.270110258966355e-06 5.485437603898311 -1.8331515301511325 SQDATFS(ph)PGSEQAEKS(ph)PGPIVSR ddPTM_KYSE-520_SHP099_60min_R1 3 SQDATFSPGSEQAEKSPGPIVSR 23 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 2 S(0.008)QDAT(0.246)FS(0.714)PGS(0.032)EQAEKS(0.999)PGPIVS(0.001)R;SQDAT(0.003)FS(0.991)PGS(0.007)EQAEKS(1)PGPIVSR;SQDAT(0.005)FS(0.995)PGSEQAEKS(1)PGPIVSR 175.04 6.5243e-11 3366470000.0 3325940.0 3202570.0 3147170.0 2873660.0 3034740.0 3105920.0 2953060.0 2948170.0 3921970.0 3047500.0 True False 3141443.4781029867 3048713.730044429 3350041.6138500446 3146771.7824026146 3273556.7726913835 3086534.8011974725 3251584.1238882537 2937943.4863780523 3209839.112818054 3020501.520919119 1.0400403563270069 1.0093402399998546 1.1091011180258068 1.041804402550035 1.083779216802136 1.0218616940998129 1.0765047133294665 0.9726674414929793 1.0626841571135248 1.0 21.526356682341923 -7.244655710675153 24.99645874684757 1.013256842395299 1.0543531492167078 0.24185527323627476 0.03473386476030871 1127.6391348739621 1679433.2640746234 0.01558999874793548 0.008969217558976911 5.693040709129773e-08 7.244655710675153 0.041096306821408746 SQDATFSPGSEQAEKS(ph)PGPIVSR ddPTM_KYSE-520_SHP099_60min_R1 5 SQDATFSPGSEQAEKSPGPIVSR 23 1 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 SQDATFSPGSEQAEKS(0.999)PGPIVS(0.001)R;SQDATFSPGSEQAEKS(1)PGPIVSR;SQDATFSPGSEQAEKS(1)PGPIVSR;SQDATFSPGSEQAEKS(1)PGPIVSR;SQDATFSPGSEQAEKS(1)PGPIVSR 214.62 4.9372e-21 16978700000.0 6637820.0 6213350.0 5158210.0 4596530.0 4798890.0 5735920.0 4731390.0 6080510.0 8111890.0 6351530.0 True False 6269606.892433887 5914851.339571513 5490716.470027814 5033382.829202866 5176535.341050939 5700119.995648509 5209685.075116531 6059418.130011709 6638975.2601059135 6295260.385615563 0.9959249512156331 0.9395721506749315 0.8721984689583131 0.7995511735628854 0.8222909020378458 0.9054621487417855 0.8275567261714016 0.9625365368297164 1.0545989924857955 1.0 22.585834621496772 -7.494935782079893 4.6659766801542135 1.0241319179305526 0.878314882303042 0.527609467078658 0.056480453526463574 0.1612501651748353 8.798206500287465 0.03911741942366553 0.016214773334927757 3.199368156409256e-08 7.494935782079893 -0.14581703562751058 SQDIYLR ddPTM_KYSE-520_SHP099_60min_R1 2 SQDIYLR 7 0 J3QQ67;Q07020;F8VYV2;G3V203;F8VXR6;A0A075B7A0 J3QQ67 RPL18 60S ribosomal protein L18 0 ; 158.03 0.0082397 963490000.0 1016120.0 1041480.0 689160.0 597160.0 973760.0 970620.0 721180.0 822310.0 817110.0 775300.0 False True 959753.7980149998 991445.7375066503 733584.3562949869 653913.9068572999 1050389.3720634915 964562.0005467918 794083.9124385316 819457.5985385975 668743.4216668557 768431.4451742719 1.248977776797432 1.2902201539680629 0.9546516620342338 0.85097234237857 1.3669265861774755 1.2552349420422788 1.0333828963212743 1.0664030001436933 0.8702707650325162 1.0 19.551557031530773 -7.304793360698991 2.0235346711743865 0.9488405474543853 1.1491517248835434 0.22367984655497497 0.15382848187815643 0.6026389461704651 4.583062157757081 0.12341212411630526 0.04842049587674837 4.9568598436320736e-08 7.304793360698991 0.20031117742915816 SQDSYPGSPSLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SQDSYPGSPSLSPR 14 0 A0A0D9SEU5;R4GMX8;Q6VN20-2;Q6VN20-3;Q6VN20 A0A0D9SEU5 RANBP10 Ran-binding protein 10 1 SQDSYPGSPSLS(1)PR 205.78 1.3234000000000002e-13 0.0 156400.0 193590.0 156580.0 132130.0 176700.0 157200.0 155880.0 175090.0 237120.0 186050.0 True False 147724.18022432976 184289.64581548562 166673.3973368579 144687.59547366694 190605.2847145283 156218.8564896208 171637.8716421951 174482.65365631308 194064.98530876468 184401.74174470964 0.8010997012644424 0.9993921102470973 0.9038602117305632 0.7846324774631253 1.0336414553958335 0.8471658402548826 0.9307822692901395 0.9462093579239138 1.0524032119904436 1.0 17.49249275707276 -7.5242215540240664 2.5497599199636234 1.0253913877389544 0.9024595099226588 0.3025073896551389 0.0751618417816979 0.36503435378138843 4.485083522705237 0.05806648579046962 0.019569188758212865 2.9907385311034037e-08 7.5242215540240664 -0.12293187781629566 SQDVAVS(ph)PQQQQCSK ddPTM_KYSE-520_SHP099_60min_R1 10 SQDVAVSPQQQQCSK 15 0 H3BQ37;H3BPW9;Q96F86;H3BTD6 H3BQ37 EDC3 Enhancer of mRNA-decapping protein 3 1 SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK;SQDVAVS(1)PQQQQCSK 460.51 6.891899999999998e-132 26163350000.0 12588480.0 14547680.0 10634130.0 8708500.0 9564720.0 13956870.0 10704540.0 12807360.0 14517770.0 13895890.0 True False 11890171.919887276 13848787.616287146 11319623.035009595 9536153.221694002 10317409.048187561 13869759.99729193 11786659.369442787 12762934.257420292 11881708.931199504 13772783.22543883 0.8633093054079075 1.0055184482035506 0.82188348206206 0.69239115040164 0.7491157654417252 1.0070411891529651 0.8557935732025753 0.9266779305613908 0.8626948334780697 1.0 23.71531679520201 -6.2590797627324815 24.997444082187492 0.9211933782229145 0.828691532832352 0.25243480139664987 0.0887311830889652 389.50709509736396 4126400.5453185365 0.03295039463691168 0.031474506773543624 5.507065440892871e-07 6.2590797627324815 -0.0925018453905625 SQEDEIS(ph)SPVNK ddPTM_KYSE-520_SHP099_60min_R1 1 SQEDEISSPVNK 12 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SQEDEIS(0.5)S(0.5)PVNK 177.42 6.3508e-05 0.0 824260.0 913600.0 698830.0 604320.0 732030.0 788640.0 690980.0 670480.0 881550.0 803820.0 True False 778536.6546784261 869709.2846584433 743877.6999675336 661754.3911045664 789636.5963190498 783717.8052288458 760831.0017149337 668154.2613712081 721482.7420670609 796698.7801624972 0.9772032718810405 1.0916412906783348 0.9337000614156958 0.830620565239968 0.9911356914064724 0.9837065459909405 0.9549794987256691 0.8386535513898105 0.9055903686960648 1.0 19.60367484042506 -4.840833690411097 8.340903483869516 0.9251318570404629 1.0339996420941313 0.31562500914203895 0.061372867891524345 0.2703097011954481 24.971318253170644 0.016454006374178418 0.03452148288784717 1.4426677037859858e-05 4.840833690411097 0.10886778505366845 SQEEPKDT(ph)FEHDPSESIDEFNK ddPTM_KYSE-520_SHP099_60min_R1 5 SQEEPKDTFEHDPSESIDEFNK 22 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.001)QEEPKDT(0.998)FEHDPS(0.001)ESIDEFNK;S(0.431)QEEPKDT(0.569)FEHDPSESIDEFNK;S(0.048)QEEPKDT(0.65)FEHDPS(0.272)ES(0.029)IDEFNK;S(0.044)QEEPKDT(0.955)FEHDPS(0.001)ESIDEFNK;S(0.395)QEEPKDT(0.603)FEHDPS(0.001)ES(0.001)IDEFNK 195.01 1.4772e-13 9647050000.0 6297870.0 6589970.0 5696610.0 6929530.0 5893210.0 5764240.0 5734380.0 5630570.0 7182630.0 5326900.0 True False 5948514.596607412 6273377.94945337 6063822.595498274 7588110.447760843 6356972.099221873 5728263.240023737 6314067.092555623 5611038.866854914 5878445.451367625 5279707.810265487 1.126674962019971 1.1882055172174228 1.1485148067679447 1.4372216646169438 1.2040386187398155 1.0849583813873394 1.195912220801121 1.0627555668791389 1.1134035561471782 1.0 22.33202665944858 -7.341127651106573 0.800367392377896 1.019477965266164 1.2177843461043187 0.3548944510141405 0.08973808619367576 0.7316815489104067 0.8836394535027754 0.08707839355918481 0.03793417115816691 4.559028938420351e-08 7.341127651106573 0.19830638083815466 SQEEPKDTFEHDPS(ph)ESIDEFNK ddPTM_KYSE-520_SHP099_60min_R1 2 SQEEPKDTFEHDPSESIDEFNK 22 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.003)QEEPKDT(0.014)FEHDPS(0.926)ES(0.057)IDEFNK;S(0.055)QEEPKDT(0.018)FEHDPS(0.923)ES(0.004)IDEFNK 232.19 6.964500000000001e-22 6411900000.0 4097100.0 4355100.0 3943800.0 4481100.0 3977800.0 4003700.0 3504300.0 3819500.0 5038600.0 3655800.0 True False 3869825.695633634 4145874.4588616276 4198023.658303107 4906982.396708161 4290830.229413976 3978711.4232028974 3858548.8426722116 3806251.0459779985 4123717.252769661 3623412.456169357 1.0680058487530792 1.1441905962989964 1.1585828853558737 1.354243397919922 1.1841959151264296 1.0980564512959585 1.0648936297888203 1.0504603304261797 1.1380755855570532 1.0 21.788917607685452 -6.348455194545943 3.757578685894027 1.0695053361745686 1.1881509913238335 0.3659499169115338 0.07404929463167902 0.29080824070759304 7.71526581800104 0.029020681591236986 0.025536104759489416 4.4827529544285484e-07 6.348455194545943 0.11864565514926495 SQEEPKDTFEHDPSES(ph)IDEFNK ddPTM_KYSE-520_SHP099_60min_R1 4 SQEEPKDTFEHDPSESIDEFNK 22 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SQEEPKDTFEHDPSES(1)IDEFNK;SQEEPKDTFEHDPSES(1)IDEFNK;SQEEPKDTFEHDPSES(1)IDEFNK;SQEEPKDTFEHDPSES(1)IDEFNK 272.91 1.7519e-36 2331610000.0 2248110.0 2081200.0 2026870.0 2080580.0 1946110.0 1882930.0 1746420.0 2007640.0 2570530.0 1904160.0 True False 2123402.8568038233 1981216.0280551105 2157525.2833066643 2278317.697650816 2099257.785148784 1871177.9354325782 1922965.1770166922 2000675.965426697 2103786.549788038 1887290.6238140624 1.1251064515504225 1.049767324150232 1.1431865638936305 1.2071896447228245 1.1123129414516737 0.9914625293115049 1.01890252235267 1.0600783685257185 1.114712553139513 1.0 20.847885169926062 -6.105110951216492 6.649137104158502 1.040090466521961 1.1302805190331007 0.4733907231289777 0.04796316752567461 0.2513295584918264 13.749784678433423 0.017086347013334575 0.017137914910732577 7.850350524598668e-07 6.105110951216492 0.09019005251113965 SQEPIPDDQKVS(ph)DDDKEKGEGALPTGK ddPTM_KYSE-520_SHP099_60min_R1 6 SQEPIPDDQKVSDDDKEKGEGALPTGK 27 3 Q86UE4;E5RJU9;H0YBJ8 Q86UE4 MTDH Protein LYRIC 1 SQEPIPDDQKVS(1)DDDKEKGEGALPTGK;SQEPIPDDQKVS(1)DDDKEKGEGALPTGK;SQEPIPDDQKVS(1)DDDKEKGEGALPTGK;SQEPIPDDQKVS(1)DDDKEKGEGALPTGK;SQEPIPDDQKVS(1)DDDKEKGEGALPTGK;SQEPIPDDQKVS(1)DDDKEKGEGALPTGK 171.57 1.782e-10 49452400000.0 12833090.0 16205370.0 14305700.0 19377630.0 15936170.0 14848250.0 15970120.0 20135990.0 24629430.0 12336670.0 True False 12121212.915569315 15426839.700443724 15227868.311929284 21219274.129103117 17190255.91459603 14755576.564071324 17584535.58295131 20066142.95046541 20157346.369404722 12227376.701584022 0.9913175337109754 1.2616638938133982 1.2453912792231678 1.7353905622580696 1.4058825808784543 1.2067655167735023 1.4381282275104261 1.6410832380641303 1.6485421903124482 1.0 23.54361158111295 -4.505538051837173 1.5765118009886072 1.4512410986319866 0.9502261258492609 0.27831559893032665 0.2120633699139986 0.8377038585153244 2.8274192764750077 0.060819164665712855 0.5636431930321306 3.122208833815593e-05 4.505538051837173 -0.5010149727827257 SQEPLDLVLVPDDCRPGT(ph)PPSDLIEIQVVK ddPTM_KYSE-520_SHP099_60min_R1 1 SQEPLDLVLVPDDCRPGTPPSDLIEIQVVK 30 1 Q8NCA9 Q8NCA9 ZNF784 Zinc finger protein 784 1 SQEPLDLVLVPDDCRPGT(0.986)PPS(0.014)DLIEIQVVK 73.691 0.051458000000000004 60353000.0 121770.0 157140.0 112050.0 93449.0 105810.0 133780.0 96197.0 133210.0 159380.0 130470.0 True False 115015.17535752301 149590.75852805146 119272.92228633878 102330.36486353353 114136.64502345338 132945.02939682856 105921.53155224689 132747.92560144782 130440.60964284296 129314.13730412388 0.8894246039551557 1.1568012720545826 0.9223502145463806 0.7913316130538046 0.8826308352892945 1.0280780753628311 0.8191024876355031 1.0265538507150866 1.008711130601829 1.0 16.98052048124485 -9.885941827675136 7.715861297325951 1.0000000006309218 0.947111755885052 0.022405923040771603 0.10458648272320215 3.1221997348151407e-10 0.0 0.1035687226041488 0.02511910449670799 1.3003437431583497e-10 9.885941827675136 -0.05288824474586973 SQET(ph)PEKPR ddPTM_KYSE-520_SHP099_60min_R1 3 SQETPEKPR 9 1 Q68DK7;J3KSZ8;Q68DK7-2;J3KTC2;Q68DK7-3;J3QQY0 Q68DK7;J3QQY0 MSL1 Male-specific lethal 1 homolog 1 SQET(1)PEKPR;S(0.001)QET(0.999)PEKPR;S(0.023)QET(0.977)PEKPR 124.86 0.0018410999999999998 2605390000.0 4836300.0 4456700.0 3841180.0 3728400.0 3883600.0 4219300.0 3597380.0 3643210.0 5026100.0 4342800.0 True False 4568020.798074969 4242593.442356913 4088788.6089053066 4082746.0150156603 4189217.2253386555 4192965.7836301303 3961038.2774454644 3630572.554841609 4113486.9376703002 4304326.170647272 1.0612626964066814 0.9856579808678683 0.949925365040458 0.948521523033583 0.9732573832128278 0.9741282647731142 0.9202458457858492 0.8434705946774601 0.9556633894804785 1.0 22.037355975040683 -1.0000000005642127 0.6130269115178305 0.9334501463452299 9.62971207722557 0.43170532662151095 0.04009242419710296 172.3489027407336 1.276095560415884 0.018530826063343074 2014.9054900935444 0.09999999987008523 1.0000000005642127 8.69626193088034 SQGDEAGGHGEDRPEPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 13 SQGDEAGGHGEDRPEPLSPK 20 1 A0A0A0MRN5;Q9NZT2-2;Q9NZT2 A0A0A0MRN5 OGFR Opioid growth factor receptor 1 SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK;SQGDEAGGHGEDRPEPLS(1)PK 210.13 7.974699999999999e-19 54687470000.0 15827390.0 16028940.0 14023830.0 19156830.0 15230060.0 14626750.0 14679150.0 15295090.0 18521180.0 14084080.0 True False 14949413.125580251 15258885.662470542 14927828.520721361 20977489.36348904 16428579.07481238 14535459.027732568 16163061.736698287 15242034.902690824 15158200.59295287 13959306.008448426 1.0709281046301724 1.093097726580074 1.069381852628402 1.5027601910004038 1.176890818559999 1.04127375808908 1.1578700063539054 1.091890592087176 1.0858849704834073 1.0 23.734723883477052 -6.180063262850533 7.479190098695996 1.086454817146359 1.189699367994856 0.15647544819231196 0.12274518622202812 0.634540912336757 51.60899380620699 0.04321168893939602 0.043218816380756864 6.605972130599545e-07 6.180063262850533 0.10324455084849693 SQIDVALS(ph)QDSTYQGER ddPTM_KYSE-520_SHP099_60min_R1 5 SQIDVALSQDSTYQGER 17 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 1 SQIDVALS(1)QDSTYQGER;SQIDVALS(0.986)QDS(0.01)T(0.004)YQGER;SQIDVALS(0.992)QDS(0.003)T(0.005)YQGER;SQIDVALS(0.994)QDS(0.003)T(0.003)YQGER;SQIDVALS(0.999)QDS(0.001)TYQGER 231.39 2.6733e-19 414120000.0 1062259.0 1091930.0 981938.0 800139.0 910534.0 909322.0 881153.0 1048045.0 1232100.0 1087420.0 True False 1003333.375709182 1039472.0437796559 1045235.2946363487 876183.9699894381 982187.8455702201 903646.58410213 970228.5444645568 1044409.5765105431 1008381.6987134329 1077786.3047999574 0.9309205092334196 0.9644509669034876 0.9697982707530781 0.8129477671847596 0.9113011004092496 0.8384283415717102 0.9002049294406614 0.96903214659458 0.9356044832102349 1.0 20.03963972926364 -7.260358521837295 24.70569486567308 0.9642387392818335 0.9031185410901192 0.2680537933381416 0.0484701985684832 127.92766096239691 2924211.7202626346 0.0259798248875083 0.013904711944723905 5.4908740021086265e-08 7.260358521837295 -0.061120198191714215 SQIDVALSQDS(ph)TYQGER ddPTM_KYSE-520_SHP099_60min_R1 1 SQIDVALSQDSTYQGER 17 0 Q92900-2;Q92900 Q92900-2 UPF1 Regulator of nonsense transcripts 1 1 SQIDVALS(0.002)QDS(0.987)T(0.01)Y(0.001)QGER 151.3 1.1754e-06 222290000.0 514480.0 513110.0 463160.0 386640.0 366930.0 433900.0 428060.0 538630.0 563200.0 581540.0 True False 485940.7688095465 488459.42540618754 493016.03468220116 423386.1493524449 395805.3034538863 431191.8691529674 471332.48226301034 536761.6182471875 460937.0771166347 576388.008031274 0.8430792487674034 0.8474489729142395 0.8553544275949801 0.7345505865026127 0.6866994072375123 0.7480930608285167 0.8177347128940208 0.9312504957911331 0.7996992836319123 1.0 19.136680794450193 -8.191564621383312 0.7905658973149673 0.9954084833568388 0.7895626252643474 0.4552328651286801 0.06500280340488032 0.8871115804227393 1.1736165946772217 0.07094422912216013 0.025606820773540654 6.433323324419353e-09 8.191564621383312 -0.20584585809249145 SQLDDHPES(ph)DDEENFIDANDDEDMEK ddPTM_KYSE-520_SHP099_60min_R1 8 SQLDDHPESDDEENFIDANDDEDMEK 26 0 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 SQLDDHPES(1)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK;SQLDDHPES(1)DDEENFIDANDDEDMEK 400.26 3.154799999999999e-101 13280860000.0 8235690.0 7584349.0 6916301.0 8530600.0 7824372.0 7537908.0 8109313.0 8095052.0 8556338.0 7595791.0 True False 7778839.858259018 7219985.489700054 7362136.828932858 9341345.659181587 8440105.561813148 7490861.120126999 8929081.497308083 8066972.154011349 7002722.706928239 7528498.20117598 1.033252535949857 0.9590206833777638 0.9779024490944109 1.2407980196797328 1.1210875444580395 0.9950007185970899 1.1860375414466229 1.0715247501488754 0.9301619685363526 1.0 22.843930671432013 SQLDDHPES(ph)DDEENFIDANDDEDMEKFTDADK ddPTM_KYSE-520_SHP099_60min_R1 1 SQLDDHPESDDEENFIDANDDEDMEKFTDADK 32 1 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 S(0.001)QLDDHPES(0.999)DDEENFIDANDDEDMEKFTDADK 103.05 0.0006584 402460000.0 95580.0 87583.0 73522.0 88144.0 79176.0 76213.0 84334.0 82495.0 93143.0 65471.0 True False 90277.98686599378 83375.38121523676 78261.34575935922 96521.17925853995 85406.7007501837 75737.32639722305 92859.30374052389 82208.8440994777 76230.5791439535 64890.97787566727 1.391225557410595 1.2848532098712717 1.2060435567685528 1.4874360414706176 1.3161567839804338 1.1671472503055456 1.431004845056344 1.266876333054988 1.174748503405407 1.0 15.985730286451155 -8.00069239165008 1.9493909688972892 1.0018662959925793 1.3209808380904604 0.5492565412261068 0.09176840249553171 0.26032291337651475 2.2646128986830076 0.0869557812976175 0.024486573362975723 9.984069795143012e-09 8.00069239165008 0.31911454209788115 SQLDDHPES(ph)DDEENFIDANDDEDMEKFTDADKETEIVK ddPTM_KYSE-520_SHP099_60min_R1 1 SQLDDHPESDDEENFIDANDDEDMEKFTDADKETEIVK 38 2 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 1 SQLDDHPES(1)DDEENFIDANDDEDMEKFTDADKETEIVK 285.45 8.1237e-54 2025900000.0 675610.0 707910.0 646830.0 676250.0 627740.0 624810.0 612080.0 618610.0 959440.0 508390.0 True False 638132.5665048545 673900.941005427 688525.6967645918 740520.5966780236 677139.5666479794 620910.329028498 673955.0197251402 616464.1862946592 785229.8815141747 503886.0601214344 1.2664223462563486 1.337407390954653 1.3664313249679105 1.4696191367142828 1.3438346885103185 1.2322435133031093 1.337514714264411 1.2234198067437982 1.5583480942595191 1.0 18.942738019508404 -6.01828054873619 23.079139467117916 1.2884217056323062 1.3648082993475759 0.08391154760073505 0.13684196965706946 832.5265491016117 1051062.3979740022 0.04256410361904198 0.043426117069707525 9.587810709917602e-07 6.01828054873619 0.07638659371526968 SQLQALHIGLDSS(ph)SIGS(ph)GPGDAEADDGFPESR ddPTM_KYSE-520_SHP099_60min_R1 2 SQLQALHIGLDSSSIGSGPGDAEADDGFPESR 32 0 E9PF63;O75116;Q14DU5 E9PF63 ROCK2 Rho-associated protein kinase 2 2 SQLQALHIGLDS(0.055)S(0.504)S(0.441)IGS(1)GPGDAEADDGFPESR;SQLQALHIGLDS(0.057)S(0.502)S(0.442)IGS(0.999)GPGDAEADDGFPESR 161.38 3.9174e-10 242750000.0 156804.0 199681.0 194158.0 236067.0 159010.0 176030.0 170343.0 173632.0 229305.0 175081.0 True False 148105.76953897544 190088.02503270865 206673.7353437837 258502.73670386855 171523.18235685962 174931.33147498706 187562.93282747257 173029.71111801325 187668.99230864647 173529.91855095682 0.853488382727987 1.0954193180059009 1.1909977084619805 1.48967243725156 0.9884357912983868 1.008075915298829 1.0808679816927071 0.9971174571098719 1.0814791701382476 1.0 17.40482489587985 SQLQALHIGLDSSS(ph)IGS(ph)GPGDAEADDGFPESR ddPTM_KYSE-520_SHP099_60min_R1 5 SQLQALHIGLDSSSIGSGPGDAEADDGFPESR 32 0 E9PF63;O75116;Q14DU5 E9PF63 ROCK2 Rho-associated protein kinase 2 2 SQLQALHIGLDS(0.054)S(0.397)S(0.55)IGS(1)GPGDAEADDGFPESR;SQLQALHIGLDS(0.108)S(0.441)S(0.485)IGS(0.966)GPGDAEADDGFPESR;SQLQALHIGLDS(0.075)S(0.422)S(0.503)IGS(1)GPGDAEADDGFPESR;SQLQALHIGLDS(0.297)S(0.332)S(0.371)IGS(1)GPGDAEADDGFPESR;SQLQALHIGLDS(0.09)S(0.455)S(0.495)IGS(0.961)GPGDAEADDGFPESR 145.8 9.1795e-07 1816390000.0 578722.0 658998.0 649972.0 811560.0 604471.0 616979.0 558163.0 583991.0 770447.0 576477.0 True False 546619.137006295 627338.7469038361 691870.2351119705 888690.4183955897 652039.4287304778 613128.205204261 614587.5631859282 581965.271525524 630553.2461883514 571369.8622723196 0.9566817802262237 1.0979556121649996 1.210897320275915 1.5553680322957468 1.1411862469212812 1.0730846089184154 1.0756387478011757 1.0185438714094348 1.1035815639289432 1.0 19.124065415686694 -6.123718426016581 4.661750806441327 1.0578187068853382 1.2133518677760133 0.19280521855887744 0.14331140465131215 0.41315646605236306 13.904893354740915 0.05213829954293225 0.052462965186343 7.521103652694279e-07 6.123718426016581 0.15553316089067515 SQNKEDYAGLKEEFR ddPTM_KYSE-520_SHP099_60min_R1 1 SQNKEDYAGLKEEFR 15 2 Q5TA02;P78417-3;P78417 Q5TA02 GSTO1 Glutathione S-transferase omega-1 0 106.82 0.00033261 473290000.0 677880.0 577680.0 410280.0 419410.0 632610.0 578400.0 462740.0 529260.0 536430.0 433540.0 False True 640276.6450797222 549927.3856846424 436727.3052712101 459270.60029978544 682392.8079414696 574789.9910534145 509518.27510719304 527424.1205902131 439027.83429985144 429699.17288901645 1.4900578950965169 1.2797962397444007 1.016355936491432 1.0688189069854384 1.588071029677591 1.3376567313101912 1.1857557734671098 1.2274264272936761 1.0217097495164238 1.0 18.712967474564575 -7.698838739332088 1.8446414651206617 0.9885434465241398 1.2783728800471976 0.29797110324272547 0.1631323891925094 0.4851127987952296 3.0963108553536056 0.1629663461711844 0.048882374714957884 2.000604589046131e-08 7.698838739332088 0.2898294335230578 SQNKEDYAGLKEEFRK ddPTM_KYSE-520_SHP099_60min_R1 2 SQNKEDYAGLKEEFRK 16 3 Q5TA02;P78417-3;P78417 Q5TA02 GSTO1 Glutathione S-transferase omega-1 0 ; 120.63 7.065600000000001e-05 2942000000.0 4463300.0 4082500.0 3109000.0 2520600.0 3341200.0 3036300.0 2404200.0 2681900.0 3427300.0 2177460.0 False True 4215711.8516320335 3886370.572042568 3309411.1145758834 2760157.066153978 3604133.431172507 3017349.325441698 2647239.9987308546 2672597.1148601635 2804988.71520213 2158169.398438245 1.9533739356524678 1.8007717905994463 1.5334343619971316 1.2789343914112397 1.6699956147004174 1.398105879744749 1.2266136294243282 1.238362992633564 1.2997073896200892 1.0 21.041376678216476 -1.0000000000002962 0.20207869256697408 1.0449523789650201 5.380902717653995 0.8077546379678244 0.12265130857432158 23.562336004840205 0.28626147390060536 0.23495550629382428 32.46458270030865 0.0999999999999318 1.0000000000002962 4.335950338688974 SQNRPQGQSTQPSNAAGTNTTSAST(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 SQNRPQGQSTQPSNAAGTNTTSASTPR 27 1 Q9UHD9 Q9UHD9 UBQLN2 Ubiquilin-2 1 SQNRPQGQSTQPSNAAGTNTTSAS(0.008)T(0.992)PR;SQNRPQGQSTQPSNAAGTNTTS(0.044)AS(0.237)T(0.719)PR 188.36 7.3985e-15 323180000.0 223880.0 254810.0 183512.0 163951.0 167924.0 209192.0 159699.0 230840.0 253490.0 236110.0 True False 211460.93010628453 242568.5451223926 195341.4771495814 179532.85374633444 181138.66344313775 207886.35513216772 175842.93343204338 230039.26991846116 207462.60596288258 234018.2490908001 0.9036087182424682 1.0365368772085588 0.8347275390210618 0.7671745876394235 0.7740364870982996 0.8883339480567899 0.7514069270889022 0.9829971415143993 0.886523195387152 1.0 17.836261512135355 -9.3831043488685 10.102650613034694 0.9999999785765094 0.8679793552391498 0.16523589072781064 0.0879488728002617 0.0 0.0 0.09041690417903468 0.02192932036891241 4.1390021417743336e-10 9.3831043488685 -0.13202062333735953 SQPAPVS(ph)PQQK ddPTM_KYSE-520_SHP099_60min_R1 1 SQPAPVSPQQK 11 0 Q13118-2;Q13118 Q13118-2 KLF10 Krueppel-like factor 10 1 SQPAPVS(1)PQQK 155.39 3.5746999999999995e-05 367180000.0 448000.0 548560.0 365120.0 283400.0 323220.0 505750.0 351450.0 498900.0 559900.0 538400.0 True False 423148.546934141 522206.35419465374 388656.2194126551 310334.250792683 348655.57512976654 502593.4266515626 386977.99582146184 497169.43234413484 458236.27393040445 533630.1948688617 0.7929621505734485 0.9785922146384252 0.7283250144946659 0.5815530188821996 0.6533655300660934 0.9418384332151102 0.725180095771306 0.9316741015120275 0.8587150396221767 1.0 19.025480776557306 -7.270629224852775 24.145360205667252 0.9213959530012953 0.7726585997404976 0.27752318670925 0.11688785165875072 669.7448802075169 1759669.080153203 0.06761638389499457 0.03324927163034972 5.3625428458242485e-08 7.270629224852775 -0.14873735326079773 SQPDPVDT(ph)PTSSKPQSK ddPTM_KYSE-520_SHP099_60min_R1 2 SQPDPVDTPTSSKPQSK 17 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 SQPDPVDT(0.994)PT(0.005)S(0.001)SKPQSK;SQPDPVDT(0.991)PT(0.007)S(0.002)SKPQSK 131.18 9.2678e-05 1507320000.0 1806610.0 1906050.0 1481880.0 1253470.0 1135920.0 1510560.0 1408620.0 1748720.0 1871530.0 1944270.0 True False 1706393.7419122509 1814480.4969606213 1577404.3558918308 1372599.411930502 1225310.4414993015 1501132.03472622 1551017.0564063964 1742654.0984743158 1531707.3294319843 1927045.2804191725 0.8854974811702788 0.9415868508112762 0.8185611266740512 0.71228186793407 0.6358493253634242 0.7789811946710938 0.8048679873619876 0.9043140377559018 0.7948476068495942 1.0 20.877959040837773 -9.13123236394557 18.210173516472256 0.9999997300092578 0.8066707246957346 0.3108135694302988 0.08549302291302659 0.0 0.0 0.09388155864196461 0.02276962250461404 7.392096641534674e-10 9.13123236394557 -0.19332900531352315 SQPPGEDS(ph)DT(ph)DVDDDSRPPGRPAEVHLER ddPTM_KYSE-520_SHP099_60min_R1 1 SQPPGEDSDTDVDDDSRPPGRPAEVHLER 29 2 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 2 SQPPGEDS(1)DT(1)DVDDDSRPPGRPAEVHLER 117.09 0.0011886 787930000.0 175830.0 146790.0 112480.0 117740.0 116190.0 155670.0 155960.0 189880.0 170290.0 158740.0 True False 166076.35939158488 139737.98806371802 119730.64077436307 128929.97420017807 125333.49196933224 154698.4057871454 171725.95882291967 189221.350598325 139369.6286615617 157333.6870978511 1.0555677074312535 0.888163181333253 0.7609981243234869 0.8194683324238896 0.7966093865923523 0.9832503683138962 1.0914760976529936 1.2026753716172804 0.8858219192110018 1.0 17.263468077203672 -6.474442859395394 4.380089989392474 1.0601805052853455 0.8581465205894677 0.39732621308475435 0.10496604187684581 0.20779546793299103 8.544386304018037 0.039964384952138 0.033709914490254095 3.3539542989479257e-07 6.474442859395394 -0.20203398469587774 SQQPLKPQVHT(ph)PVATVK ddPTM_KYSE-520_SHP099_60min_R1 1 SQQPLKPQVHTPVATVK 17 1 Q6P3W7;A0A0U1RQQ9 Q6P3W7 SCYL2 SCY1-like protein 2 1 SQQPLKPQVHT(0.641)PVAT(0.359)VK 100.64 0.0023832 900670000.0 840290.0 788500.0 651530.0 560390.0 757790.0 672140.0 603750.0 644920.0 872730.0 752580.0 True False 793677.4386234136 750619.2764373708 693528.6662848588 613649.2971126024 817423.7617646984 667944.9249423259 664782.9420321739 642682.9230454599 714264.2317329556 745912.7266983795 1.0640352553528 1.006309786078894 0.9297718640015873 0.8226824334111948 1.0958705120676073 0.8954732920281959 0.891234213115911 0.8616060566363523 0.9575707802901968 1.0 19.508647316546075 -4.5956645883300915 3.0051260456659326 0.9259333146277988 1.057316655908802 0.25953752817137 0.07240957186227309 0.336071518699788 5.792527968021976 0.01897988991468227 0.07258980875446669 2.5370873018630036e-05 4.5956645883300915 0.13138334128100326 SQQQPTPVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 SQQQPTPVTPK 11 0 O95251;O95251-4;O95251-2 O95251 KAT7 Histone acetyltransferase KAT7 1 SQQQPT(0.084)PVT(0.915)PK;SQQQPTPVT(1)PK;SQQQPTPVT(1)PK;SQQQPTPVT(1)PK;SQQQPTPVT(1)PK;SQQQPTPVT(1)PK;SQQQPTPVT(1)PK;SQQQPTPVT(1)PK;SQQQPTPVT(1)PK 277.21 2.3369999999999997e-20 14798960000.0 17751230.0 23983260.0 17355360.0 14705660.0 15843850.0 22896280.0 16550390.0 20374050.0 23764710.0 24060710.0 True False 16766533.885700298 22831068.189992838 18474114.27515783 16103281.504982103 17090670.85582497 22753375.82357618 18223464.93744077 20303377.175889038 19449637.723587442 23847550.828349102 0.7030715232093709 0.9573758057725614 0.7746755383029302 0.6752593430197916 0.7166635676275905 0.9541179296503602 0.7641650527809077 0.8513820694640525 0.8155821897008568 1.0 24.507337771564696 -6.245351742286573 24.957188878974144 0.8607055614862114 0.7715804495090649 0.24546476003095763 0.09544030747687819 1514.0507717494525 2348789.2164496137 0.03208369128106552 0.03198338475654578 5.683923939665091e-07 6.245351742286573 -0.08912511197714645 SQRPFS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SQRPFSPR 8 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 SQRPFS(1)PR 87.667 0.0031571999999999998 5930500000.0 4029800.0 3357100.0 3028100.0 2817100.0 3612500.0 2995200.0 2772600.0 2807200.0 3428500.0 2991000.0 True False 3806258.9607928647 3195819.876890167 3223296.171131305 3084836.3370080036 3896783.1976866587 2976505.8457869743 3052881.465968375 2797462.478405408 2805970.82545167 2964502.066962791 1.2839454568815583 1.0780292287548874 1.0872976635950384 1.040591730863085 1.314481524945946 1.004049172020474 1.0298125611010724 0.9436534079638813 0.9465234842377627 1.0 21.499358371953704 -6.4906412890762235 24.718304350558277 0.9812487837145539 1.1468743365290355 0.5173974403703712 0.08473192433855291 502.1995864432549 385065.8516450907 0.02992617066288262 0.02636766858267374 3.23116183811412e-07 6.4906412890762235 0.16562555281448155 SQS(ph)DLSSSSSR ddPTM_KYSE-520_SHP099_60min_R1 3 SQSDLSSSSSR 11 0 J3KP75 J3KP75 PHACTR2 Phosphatase and actin regulator 1 S(0.018)QS(0.982)DLSSSSSR;S(0.001)QS(0.987)DLS(0.011)SSSSR;S(0.001)QS(0.995)DLS(0.004)SSSSR 155.14 3.6701e-05 1309290000.0 1508030.0 1354950.0 1402620.0 1295710.0 1385100.0 1280200.0 1368690.0 1352140.0 1711900.0 1366870.0 True False 1424376.5697167239 1289856.168178586 1493035.1294713502 1418853.8888305842 1494099.489859044 1272209.796933921 1507050.5423271486 1347449.7419318494 1401062.1134871552 1354760.595208769 1.0513861819971424 0.9520915892743536 1.1020656599783027 1.0473096824992452 1.1028513046091386 0.9390661356945307 1.1124109659352115 0.994603582874513 1.0341769006584156 1.0 20.36960649941204 SQS(ph)ES(ph)SDEVTELDLSHGKK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSESSDEVTELDLSHGKK 19 1 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 2 S(0.107)QS(0.825)ES(0.63)S(0.437)DEVTELDLSHGKK 111.58 2.2145e-05 610680000.0 411200.0 359390.0 337150.0 335850.0 367340.0 383900.0 337570.0 336710.0 545710.0 346330.0 True False 388389.9162931223 342124.364944612 358883.22845907306 367769.08302301535 396247.568121306 381503.93769952515 371694.86996571615 335542.031598705 446622.82022961334 343261.7856406625 1.1314685541480618 0.9966864336677397 1.0455088316611032 1.0713953559864304 1.154359689010389 1.1114081253976107 1.0828320701996765 0.9775105928918089 1.301114306668417 1.0 18.388949729531518 -5.5328602745403295 24.08014760674207 1.1035991050214098 1.0528818260279516 0.05505606466450785 0.0883744232021708 391.00185108186287 943273.6566991196 0.024906148498292216 0.03219838555012684 2.9318363525370157e-06 5.5328602745403295 -0.05071727899345824 SQS(ph)FAGVLGSHER ddPTM_KYSE-520_SHP099_60min_R1 4 SQSFAGVLGSHER 13 0 A0A0A0MTL6;Q6ZS17-2;Q6ZS17;Q6ZS17-3;Q6ZS17-4;H3BSV5;H3BMG9;H3BS40;H3BUP6;H3BQI5;H3BU12;H3BV02 A0A0A0MTL6 FAM65A Protein FAM65A 1 SQS(1)FAGVLGSHER;S(0.001)QS(0.998)FAGVLGS(0.001)HER;S(0.115)QS(0.885)FAGVLGSHER;S(0.188)QS(0.812)FAGVLGSHER 169.51 4.5318000000000004e-07 2934760000.0 1625640.0 1673350.0 1704300.0 1748570.0 1695040.0 1611620.0 1528920.0 1510720.0 1921640.0 1844670.0 True False 1535462.5085670042 1592959.754250444 1814161.9049764173 1914753.5670732597 1828430.0045416753 1601561.2817799156 1683478.1544212517 1505479.6649247 1572718.6166022883 1828327.6589315422 0.8398180167904447 0.871266015404129 0.9922520704175075 1.0472704702133226 1.0000559777180162 0.8759706029475336 0.9207748655977019 0.8234189629907412 0.8601951673811961 1.0 20.802093211686895 -6.282815001723531 24.40281233224721 0.8865795318087862 0.9534875701328505 0.11768273107849614 0.07139968806116322 1203.1614784285491 1373546.6774513104 0.027225257906920507 0.024035466685187037 5.214167739367306e-07 6.282815001723531 0.06690803832406422 SQS(ph)FNNQAFHAK ddPTM_KYSE-520_SHP099_60min_R1 3 SQSFNNQAFHAK 12 0 Q6NUP7 Q6NUP7 PPP4R4 Serine/threonine-protein phosphatase 4 regulatory subunit 4 1 S(0.018)QS(0.982)FNNQAFHAK;S(0.33)QS(0.67)FNNQAFHAK;S(0.012)QS(0.988)FNNQAFHAK 209.33 9.1156e-11 2181760000.0 2116280.0 2176200.0 2389250.0 2276170.0 2389750.0 2157090.0 2377320.0 2234810.0 3002910.0 2475810.0 True False 1998885.7297004124 2071652.0854572055 2543264.8779351655 2492496.5124445376 2577809.7291824776 2143626.801178093 2617642.7060073353 2227057.9657185744 2457657.2412008406 2453876.2495510303 0.8145829399775704 0.844236577063021 1.036427520907173 1.0157384721012617 1.0505051873150175 0.873567606178306 1.0667378627941275 0.9075673502793976 1.001540824094329 1.0 21.226631064184506 -4.69785000640452 6.506508355609986 0.9916747580718746 0.825092132284165 0.5666218577149307 0.05762148050444762 0.14120612600954557 11.009102556323606 0.014184699213256107 0.03795196005236193 2.0051644374797388e-05 4.69785000640452 -0.16658262578770955 SQS(ph)FNSIDK ddPTM_KYSE-520_SHP099_60min_R1 6 SQSFNSIDK 9 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;H0YHX7;A0A1B0GTC4;F8VZV4 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.001)QS(0.989)FNS(0.011)IDK;S(0.005)QS(0.994)FNSIDK;SQS(1)FNSIDK;SQS(1)FNSIDK;SQS(1)FNSIDK;S(0.001)QS(0.999)FNSIDK 248.56 1.1586e-13 7430360000.0 8689100.0 8605900.0 8190200.0 8049800.0 8453100.0 7901800.0 7893700.0 8528000.0 9406500.0 8836000.0 True False 8207098.301708582 8192459.646280751 8718153.39678333 8814850.571739368 9118310.878440157 7852481.9351761155 8691672.231087975 8498418.358450156 7698516.718568225 8757719.91430397 0.937127286784308 0.93545577232951 0.9954820983192193 1.0065234624987363 1.0411740690116424 0.8966354270305755 0.9924583471654399 0.9703916591999823 0.8790549131394635 1.0 23.062123880189624 -9.125349856931228 12.152881906571048 0.9999994116094045 0.9647361747644625 0.05124593870108529 0.047888753745906544 0.0 0.0 0.0469475846162033 0.011386461778837 7.492903562961333e-10 9.125349856931228 -0.035263236844942036 SQS(ph)FSK ddPTM_KYSE-520_SHP099_60min_R1 8 SQSFSK 6 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 SQS(1)FSK;SQS(0.997)FS(0.003)K;SQS(0.998)FS(0.002)K;S(0.003)QS(0.934)FS(0.063)K;SQS(0.996)FS(0.004)K;SQS(0.998)FS(0.002)K;SQS(0.996)FS(0.004)K;SQS(0.995)FS(0.005)K 119.07 0.0082591 13447610000.0 16477200.0 11754200.0 12149690.0 15494100.0 16072100.0 15464800.0 21030600.0 11888010.0 17154700.0 16438300.0 True False 15563176.869516125 11189510.588586096 12932878.457591316 16966654.605528954 17336882.832260136 15368278.446823707 23156578.28687675 11846773.2679924 14039838.914795324 16292669.450803861 0.9552257177075582 0.6867819065729599 0.7937851127859973 1.0413673865268187 1.0640909940884338 0.9432633794743472 1.4212881662393408 0.7271229127776783 0.8617273527330179 1.0 23.957719663895823 -5.25765154963367 23.486090749262736 1.0138477569901148 0.7994159744816496 0.20239247816391792 0.1779915428964978 217.48305427278694 1348466.560814057 0.04968301211964397 0.08192151574157357 5.525205689727216e-06 5.25765154963367 -0.21443178250846517 SQS(ph)FTHSPSGDPK ddPTM_KYSE-520_SHP099_60min_R1 4 SQSFTHSPSGDPK 13 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(0.326)QS(0.653)FT(0.021)HSPSGDPK;S(0.013)QS(0.946)FT(0.04)HS(0.001)PSGDPK;S(0.04)QS(0.704)FT(0.078)HS(0.168)PS(0.01)GDPK;SQS(0.493)FT(0.493)HS(0.014)PSGDPK 187.75 2.7895e-08 2905430000.0 1526090.0 1867780.0 1651140.0 2722890.0 1584640.0 1765090.0 1664300.0 1593630.0 2119120.0 1835870.0 True False 1441434.7455150061 1778049.0452050623 1757575.1263174077 2981672.6469332683 1709342.1526317457 1754073.4185831072 1832543.686002728 1588102.069486039 1734341.226667974 1819605.6200852469 0.7921687697620302 0.9771617682307236 0.965909924060944 1.6386367540421092 0.9394025462240904 0.9639854918127426 1.0071103681889457 0.872772677747411 0.9531412782659583 1.0 20.79519436502186 SQS(ph)GGYSDR ddPTM_KYSE-520_SHP099_60min_R1 1 SQSGGYSDR 9 0 F6WMK9;K7EMY9;K7EPM4;K7EQR7;D6W5Y5;Q14011;Q14011-3;Q14011-2 F6WMK9 CIRBP Cold-inducible RNA-binding protein 1 S(0.001)QS(0.999)GGYSDR 105.36 0.0016394000000000003 215430000.0 302400.0 241530.0 232990.0 215280.0 344220.0 354610.0 244030.0 194710.0 271820.0 379800.0 True False 285625.2691805456 229926.5362560787 248008.9081971809 235740.14647370798 371308.1556561116 352396.7474540995 268698.93390328996 194034.59645565588 222464.34002457993 376435.2674799285 0.7587633090084343 0.6107996676170581 0.6588354748413808 0.6262435187114279 0.9863798313634621 0.9361416899464374 0.7137985122969833 0.5154527570029069 0.5909763490383954 1.0 18.522042272096485 -3.923484222311284 19.598272911426047 0.7271264235786947 1.7583347774024594 0.0 0.16650911242510752 3154.862171120896 1188906.778933208 0.04269316269636702 67068.50019504162 0.00011926575936880498 3.923484222311284 1.0312083538237646 SQS(ph)IEQESQEK ddPTM_KYSE-520_SHP099_60min_R1 2 SQSIEQESQEK 11 0 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 1 S(0.025)QS(0.975)IEQESQEK;SQS(1)IEQESQEK 209.39 1.856e-11 779890000.0 3183700.0 2822800.0 2410300.0 2091360.0 2331500.0 2576800.0 2049380.0 2313900.0 2692600.0 2596700.0 True False 3007093.8144513955 2687188.4508908167 2565671.7946163528 2290122.2256096867 2514975.7855796376 2560717.2353845723 2256551.3304213616 2305873.620968318 2203691.714922319 2573695.2582020303 1.1683954442034972 1.0440973702411342 0.9968825121932724 0.8898187220539676 0.9771847609248758 0.994957436092677 0.8767748719394914 0.895938869848635 0.856236459192067 1.0 21.295409808777002 -2.073175095548559 0.5830770404737666 0.9153613250330692 4.576043039327191 0.7047870268414286 0.048808148665687334 22.370408576057166 0.6839916978825862 0.02331108736087316 92.80426774512138 0.008449381207496047 2.073175095548559 3.6606817142941215 SQS(ph)KS(ph)PTGTPAR ddPTM_KYSE-520_SHP099_60min_R1 1 SQSKSPTGTPAR 12 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 2 S(0.356)QS(0.646)KS(0.979)PT(0.018)GT(0.001)PAR 98.943 0.0039423 0.0 454300.0 438960.0 409880.0 425680.0 469010.0 498200.0 456690.0 411170.0 567610.0 403570.0 True False 429099.07337540266 417871.7027076072 436301.5206311874 466136.4992146409 505918.41869813734 495090.5490020928 502856.6820648837 409743.74723779963 464546.3322836876 399994.68377270864 1.072761941054277 1.0446931413344906 1.0907682985084612 1.1653567362898163 1.2648128568269132 1.2377428228106677 1.2571584135118778 1.0243729825935155 1.1613812661261755 1.0 18.60962130007252 -5.169345658644109 3.473964190189764 1.171779981630006 1.0607163804983084 0.18298121839408388 0.08493714884876681 0.37390379159362336 8.52591033769045 0.024539760453714126 0.04539465374506909 6.771023815906024e-06 5.169345658644109 -0.11106360113169766 SQS(ph)KSPT(ph)GTPAR ddPTM_KYSE-520_SHP099_60min_R1 1 SQSKSPTGTPAR 12 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 2 S(0.098)QS(0.9)KS(0.061)PT(0.94)GTPAR 128.71 0.0036335 0.0 439840.0 410710.0 360150.0 367680.0 414100.0 376460.0 373230.0 360410.0 509720.0 348460.0 True False 415441.19840069744 390978.87511172134 383365.845260374 402624.1966529774 446687.31409330026 374110.37349925353 410959.730773778 359159.82183032646 417167.6969955444 345372.9154977778 1.202877179300328 1.132048454199753 1.1100055275262042 1.1657665629995468 1.2933478395359996 1.0832070400195022 1.1899014437234356 1.0399188984251353 1.2078761196264927 1.0 18.397795424098266 -10.857323887669246 0.3064043357123157 0.8478524658288977 1.1693987152008845 0.32903841317820515 0.06802793647729634 35.40145710937411 1.7744100185979033 3.964323766950931 0.06855050820774146 1.3889164202827331e-11 10.857323887669246 0.3215462493719867 SQS(ph)KSPTGTPAR ddPTM_KYSE-520_SHP099_60min_R1 5 SQSKSPTGTPAR 12 1 Q13595 Q13595 TRA2A Transformer-2 protein homolog alpha 1 S(0.013)QS(0.805)KS(0.179)PT(0.003)GTPAR;S(0.048)QS(0.945)KS(0.008)PTGTPAR;SQS(0.999)KS(0.001)PTGTPAR;S(0.003)QS(0.979)KS(0.018)PTGTPAR;S(0.026)QS(0.956)KS(0.018)PTGTPAR 186.42 1.6001e-07 2848730000.0 1754180.0 1870220.0 1863850.0 1631640.0 1741160.0 1672720.0 1611800.0 1788590.0 2304560.0 2041500.0 True False 1656872.1385288644 1780371.82394255 1983996.7532654433 1786710.5750295443 1878179.3861547702 1662279.9340160205 1774736.4736521041 1782385.798750046 1886109.9972299545 2023413.898262965 0.8188498358893527 0.8798851413795967 0.9805194849005633 0.8830178425498496 0.928223033244521 0.8215224455278447 0.8771000709126578 0.8808804764463495 0.9321424543189698 1.0 20.9483600290595 -8.04879886265555 2.9154147233170047 0.9998162955635395 0.8860562984054355 0.3999403489751775 0.04425577309786009 0.31093521116260175 6.4226213346031225 0.04385094414653222 0.011752209881201917 8.93719301348174e-09 8.04879886265555 -0.11375999715810392 SQS(ph)LNIR ddPTM_KYSE-520_SHP099_60min_R1 4 SQSLNIR 7 0 O00443;A0A0C4DGF9;O00443-2 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 SQS(1)LNIR;S(0.013)QS(0.987)LNIR;S(0.093)QS(0.907)LNIR;SQS(1)LNIR 134.77 0.0018439 2240840000.0 2089610.0 1836990.0 2112230.0 2043610.0 2020910.0 1830300.0 1875720.0 2067420.0 2262940.0 2018100.0 True False 1973695.1677657363 1748738.2430217958 2248387.7254874925 2237834.079966249 2179944.119595002 1818876.4187846857 2065336.0828630878 2060248.6025594566 1852047.1400751343 2000221.2040580434 0.9867384486083384 0.8742724252067523 1.1240695383720407 1.1187932991741798 1.0898515200080556 0.9093376348048676 1.0325538388818893 1.0300103800417824 0.9259211612784156 1.0 20.9317281254995 -7.742833722604184 24.873033154696536 0.9629605628905601 1.0215253252433814 0.07792455039068313 0.07941154265818061 575.6230612771011 769529.8820022262 0.05747477042679317 0.021638521589006997 1.8078661673601238e-08 7.742833722604184 0.058564762352821265 SQS(ph)LPNSLDYTQTSDPGR ddPTM_KYSE-520_SHP099_60min_R1 6 SQSLPNSLDYTQTSDPGR 18 0 H0YLG5;Q96TC7;H0YNE5 H0YLG5 RMDN3 Regulator of microtubule dynamics protein 3 1 S(0.04)QS(0.783)LPNS(0.17)LDY(0.004)T(0.002)QTSDPGR;S(0.015)QS(0.539)LPNS(0.416)LDY(0.006)T(0.019)QTS(0.005)DPGR;S(0.005)QS(0.995)LPNSLDYTQTSDPGR;S(0.004)QS(0.996)LPNSLDYTQTSDPGR;SQS(1)LPNSLDYTQTSDPGR;SQS(1)LPNSLDYTQTSDPGR 388.46 1.2432e-86 7242990000.0 2871620.0 3161100.0 2525480.0 2318980.0 2341160.0 2956810.0 2451270.0 2960140.0 3766060.0 2935130.0 True False 2712325.514167451 3009236.0110921646 2688276.48171087 2539375.1619732413 2525395.972621757 2938355.4520170195 2699068.293689783 2949871.96524187 3082238.438646789 2909127.031696587 0.932350318365313 1.0344120343679852 0.9240835661078306 0.8728993730096041 0.8680940863379761 1.0100471447282888 0.9277932054124503 1.0140058969929273 1.0595063072406448 1.0 21.472154864730182 -7.343234396841524 4.3043701405668635 1.031584530264753 0.9390910680160703 0.3763930932461297 0.05080979800668259 0.26195943192374893 8.896978383192947 0.03185451595923445 0.014506400926838275 4.536966819870341e-08 7.343234396841524 -0.09249346224868271 SQS(ph)LPTTLLS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 6 SQSLPTTLLSPVR 13 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7 P28290-3 SSFA2 Sperm-specific antigen 2 2 S(0.001)QS(0.985)LPT(0.018)T(0.016)LLS(0.981)PVR;S(0.054)QS(0.935)LPT(0.017)T(0.015)LLS(0.979)PVR;S(0.044)QS(0.956)LPT(0.002)T(0.003)LLS(0.995)PVR;S(0.02)QS(0.973)LPT(0.015)T(0.011)LLS(0.98)PVR;S(0.051)QS(0.948)LPT(0.003)T(0.005)LLS(0.994)PVR;S(0.001)QS(0.999)LPT(0.001)TLLS(0.999)PVR 166.21 8.850299999999999e-07 5661260000.0 10410950.0 9736050.0 8700120.0 8420850.0 9037960.0 8557060.0 8501710.0 8886130.0 10718900.0 8859970.0 True False 9833433.849785713 9268315.54389101 9260943.65588419 9221165.052179126 9749196.033041976 8503652.214459762 9361145.81549375 8855306.089068344 8772617.96147991 8781477.558752354 1.1197926298843515 1.055439187981917 1.054599706475815 1.050069876109692 1.1101999598376373 0.9683623464919422 1.0660103328697401 1.0084073015983974 0.9989911040353779 1.0 23.06603227529654 -1.0000000000038618 0.1697374112358352 0.9846860936508767 1.458631737310822 0.45124804890244097 0.03461467053859051 56.81595296226431 0.6134654980522042 0.08798250753729187 6.837555904701629 0.09999999999911079 1.0000000000038618 0.4739456436599453 SQS(ph)LPTTLLSPVR ddPTM_KYSE-520_SHP099_60min_R1 10 SQSLPTTLLSPVR 13 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7 P28290-3 SSFA2 Sperm-specific antigen 2 1 S(0.002)QS(0.994)LPT(0.002)T(0.002)LLSPVR;S(0.071)QS(0.923)LPT(0.005)T(0.002)LLSPVR;SQS(1)LPTTLLSPVR;SQS(0.999)LPTT(0.001)LLSPVR;SQS(1)LPTTLLSPVR;SQS(0.989)LPT(0.005)T(0.005)LLSPVR;SQS(0.98)LPT(0.01)T(0.01)LLSPVR;SQS(0.917)LPT(0.041)T(0.041)LLSPVR;S(0.001)QS(0.993)LPT(0.002)T(0.004)LLSPVR;S(0.002)QS(0.978)LPT(0.007)T(0.014)LLSPVR 232.22 1.0949000000000001e-13 34261210000.0 13145010.0 14530580.0 11050010.0 9319430.0 10152220.0 13188360.0 10963690.0 13367880.0 15810120.0 13438170.0 True False 12415830.091372224 13832509.125954777 11762311.325241115 10205145.825211197 10951141.955769802 13106046.553266268 12072006.78050305 13321509.944366654 12939400.74869183 13319118.268538045 0.9321810829400369 1.0385454087174408 0.8831148645196458 0.7662028085836159 0.8222122316939107 0.9840025660125651 0.9063668132611392 1.000179567129024 0.9714907914930698 1.0 23.6669952427384 -6.978685041365985 1.5135154040334777 0.9902999577256681 0.8956837535454331 0.22593027189824166 0.07225847696022458 0.7329916246414426 3.2680151450919235 0.05483691848606454 0.026840985576139467 1.0503038528875445e-07 6.978685041365985 -0.09461620418023509 SQS(ph)LQDQPTR ddPTM_KYSE-520_SHP099_60min_R1 1 SQSLQDQPTR 10 0 Q8N4C8 Q8N4C8 MINK1 Misshapen-like kinase 1 1 SQS(1)LQDQPTR 179.67 1.5631e-05 1012500000.0 1172000.0 1085500.0 1077000.0 802140.0 974230.0 1018400.0 1016700.0 1088700.0 1315800.0 1039800.0 True False 1106986.823675922 1033350.9506312808 1146425.1432609276 878375.1444278153 1050896.3583895573 1012043.7878437008 1119477.958035795 1084923.553804491 1076883.8886187274 1030588.1809521595 1.0741311070084054 1.0026807698071685 1.1123988848792605 0.8523046942147982 1.0197054243515924 0.9820060103044016 1.0862515005766031 1.0527226819175541 1.0449216365200262 1.0 19.975036521828315 -6.75147318787784 24.99974497299664 1.050367515695686 1.005307748970144 0.07349234032207252 0.06650716000003312 518.659532310445 1301037.1084548167 0.025505829044907315 0.019525930178830333 1.7722574559579676e-07 6.75147318787784 -0.045059766725541905 SQS(ph)MDAMGLSNK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSMDAMGLSNK 12 0 J3KPC5;P47736-3;F2Z357;P47736;P47736-4;A0A0A0MQY8;X6R8W7;P47736-2 J3KPC5 RAP1GAP Rap1 GTPase-activating protein 1 1 S(0.01)QS(0.99)MDAMGLSNK 119.87 0.00012859 470720000.0 613140.0 664770.0 520690.0 435680.0 501460.0 594410.0 574040.0 637850.0 629210.0 612480.0 True False 579127.9019357129 632833.4513598869 554254.5105334568 477086.8962080321 540922.049082893 590700.0667048057 632069.5652905165 635637.4472253098 514961.3250933189 607053.9037022298 0.9539974924859143 1.042466653291307 0.913023550550015 0.7859053261966193 0.8910609845089215 0.9730603215007971 1.041208303637822 1.0470856761627887 0.8482958794148799 1.0 19.211465101545652 -6.4047600783654435 5.5472751573936385 0.9904686695350439 0.917083058622142 0.14472777598307007 0.07817388439563397 0.47582945495279494 19.82091045040944 0.03035184360739919 0.026557557935839377 3.937675483161033e-07 6.4047600783654435 -0.07338561091290186 SQS(ph)MDIDGVSCEK ddPTM_KYSE-520_SHP099_60min_R1 5 SQSMDIDGVSCEK 13 0 O95155-2;O95155;O95155-4 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 S(0.249)QS(0.751)MDIDGVSCEK;SQS(1)MDIDGVSCEK;SQS(1)MDIDGVSCEK;SQS(1)MDIDGVSCEK;SQS(1)MDIDGVSCEK 243.99 5.744e-16 1492120000.0 3866570.0 3852130.0 3384060.0 3448620.0 3607780.0 3868520.0 4174110.0 4591220.0 4922400.0 4252730.0 True False 3652083.654283796 3667067.8926349906 3602201.922287441 3776375.807934592 3891691.760539782 3844375.1317253634 4596069.7741878545 4575294.1294188 4028616.243606034 4215054.120773879 0.8664381404462911 0.8699930742435452 0.8546039550320367 0.8959258172564707 0.9232839363460585 0.9120583085228667 1.0903940121518585 1.0854650968464388 0.9557685686053268 1.0 22.007119724636446 -6.649510564442662 5.362308691527253 1.0394002205748114 0.8841825646641148 0.7566439589779913 0.040662662359835185 0.10277241283236475 4.43302537432192 0.01649592164545412 0.01260871960032135 2.2412455256380045e-07 6.649510564442662 -0.15521765591069658 SQS(ph)PAASDCSSSSSSASLPSSGR ddPTM_KYSE-520_SHP099_60min_R1 10 SQSPAASDCSSSSSSASLPSSGR 23 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.003)QS(0.997)PAASDCSSSSSSASLPSSGR;S(0.122)QS(0.873)PAAS(0.005)DCSSSSSSASLPSSGR;S(0.001)QS(0.999)PAASDCSSSSSSASLPSSGR;S(0.272)QS(0.728)PAASDCSSSSSSASLPSSGR;SQS(1)PAASDCSSSSSSASLPSSGR;S(0.01)QS(0.99)PAASDCSSSSSSASLPSSGR;S(0.005)QS(0.995)PAASDCSSSSSSASLPSSGR;S(0.094)QS(0.755)PAAS(0.15)DCSS(0.001)SSSSASLPSSGR;S(0.004)QS(0.995)PAAS(0.001)DCSSSSSSASLPSSGR;SQS(1)PAASDCSSSSSSASLPSSGR 400.14 2.4892999999999996e-100 12195864000.0 2383200.0 2974646.0 1955806.0 1890211.0 1665352.0 2491603.0 1832282.0 2438774.0 2994243.0 2478764.0 True False 2250999.1452085804 2831739.541125323 2081880.3841602413 2069856.0851273404 1796405.7278432858 2476051.9814637946 2017506.9459090587 2430314.4622081337 2450563.9499235484 2456804.07940921 0.9162306282680385 1.1526110546862467 0.8473937346525707 0.8424994497831836 0.731196167777151 1.007834528693559 0.8211916297347611 0.9892178552522404 0.9974600622255715 1.0 21.22835138228078 -9.336791652673671 10.740334815751462 1.0 0.9208485221705788 0.03953294661430551 0.11370098953783622 0.0 0.0 0.11349489461233744 0.02752655520323601 4.6047742886732486e-10 9.336791652673671 -0.07915147782942122 SQS(ph)PHYFR ddPTM_KYSE-520_SHP099_60min_R1 4 SQSPHYFR 8 0 Q9UKJ3-2;Q9UKJ3 Q9UKJ3-2 GPATCH8 G patch domain-containing protein 8 1 SQS(1)PHYFR;S(0.036)QS(0.963)PHYFR;SQS(0.999)PHYFR;S(0.227)QS(0.772)PHY(0.001)FR 124.42 0.00058869 3397090000.0 2730270.0 3490900.0 3524620.0 5869000.0 2889250.0 2907270.0 2627430.0 2570010.0 3423070.0 2576000.0 True False 2578816.4804416886 3323191.9240522757 3751822.644791392 6426787.995420809 3116617.537416243 2889124.649532951 2893036.2656457047 2561095.235154841 2801526.776572511 2553178.644097672 1.0100415364209963 1.3015900519670598 1.469471262210615 2.517171295584028 1.2206813434779054 1.1315795141134775 1.1331115714655147 1.0031006804304394 1.0972701745915663 1.0 21.283863054948966 -5.982325223130673 24.99801523078686 1.0879807760308051 1.5877334574928674 0.29993921571792936 0.3622728012279274 327.6592373422999 463416.84419876937 0.11936805162096441 0.13532414135078882 1.0415371780708989e-06 5.982325223130673 0.4997526814620623 SQS(ph)PINCIRPSVLGPLK ddPTM_KYSE-520_SHP099_60min_R1 2 SQSPINCIRPSVLGPLK 17 1 Q96E09 Q96E09 FAM122A Protein FAM122A 1 S(0.038)QS(0.962)PINCIRPSVLGPLK;SQS(1)PINCIRPSVLGPLK 183.56 2.4435e-12 1888370000.0 2167400.0 1776350.0 1344350.0 1303000.0 1303080.0 1778690.0 1470650.0 1725780.0 1919270.0 1655630.0 True False 2047170.0013952192 1691011.4796442895 1431008.9520360532 1426836.7282387665 1405624.9824890064 1767588.5359384457 1619317.6541608556 1719793.671980078 1570778.9488594509 1640962.4062606504 1.2475422920018113 1.0304998293639698 0.8720546836273785 0.8695121367772077 0.8565857311089045 1.0771657712539224 0.9868097209191294 1.048039653692655 0.9572303075722921 1.0 20.646110757034673 -4.317520793043977 3.3521863168524573 0.9582639959254717 1.2694158555257122 0.5951605388221515 0.07146081624037212 0.20122896998409742 3.7742406064280942 0.020034258977966252 0.14674856264356184 4.813702065245209e-05 4.317520793043977 0.3111518596002405 SQS(ph)PVHLR ddPTM_KYSE-520_SHP099_60min_R1 6 SQSPVHLR 8 0 Q96T58;A0A669KB49 Q96T58 SPEN Msx2-interacting protein 1 S(0.274)QS(0.726)PVHLR;S(0.205)QS(0.795)PVHLR;S(0.196)QS(0.804)PVHLR;S(0.017)QS(0.983)PVHLR;S(0.046)QS(0.954)PVHLR;S(0.005)QS(0.995)PVHLR 93.345 0.0029178 5509710000.0 4598950.0 4769960.0 4534770.0 4717640.0 4305730.0 4230330.0 4101200.0 4333620.0 5302850.0 4219550.0 True False 4343837.075720462 4540803.961744068 4827088.530088537 5166003.087189809 4644566.454747505 4203926.941308763 4515789.319854826 4318587.683694508 4339986.11397007 4182168.0697602252 1.0386567453204973 1.0857535818746769 1.1542072077378964 1.2352452127745286 1.1105642760583243 1.0052027731037088 1.079772320129097 1.032619352369094 1.037735940205505 1.0 21.9958196103376 -6.1343314048289725 5.611356234943037 1.0366033968819501 1.1323175764415239 0.45467856726809386 0.051305197352590974 0.23969444296770523 9.970389490765555 0.018486939811098103 0.018542302447483113 7.339535833719182e-07 6.1343314048289725 0.09571417955957373 SQS(ph)RS(ph)NS(ph)PLPVPPSK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSRSNSPLPVPPSK 15 1 Q13247;Q13247-3 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 3 S(0.408)QS(0.658)RS(0.981)NS(0.952)PLPVPPSK 97.45 0.0018333 550380000.0 2088800.0 2681300.0 2268500.0 1911900.0 2263900.0 2080900.0 1917500.0 2133900.0 2966600.0 1941400.0 True False 1972930.1000804324 2552486.323286647 2414731.1397283347 2093606.4011663038 2442056.0501710265 2067912.3312293384 2111339.612996595 2126497.998956003 2427940.221900226 1924200.7063863461 1.0253244859189352 1.326517714506104 1.2549268544148942 1.088039513870724 1.269127509446358 1.0746864006265142 1.0972553985606295 1.105133155755655 1.2617915656313754 1.0 20.87582785856017 -6.275712622116697 24.59517227423997 1.1136867583183334 1.197849577431842 0.1465717426320483 0.10170590342895916 1349.2466777590992 2324969.0435325317 0.03482681508968159 0.03085395923173477 5.300140445499549e-07 6.275712622116697 0.08416281911350865 SQS(ph)S(ph)S(ph)QGDNPLAPGYLPPHYK ddPTM_KYSE-520_SHP099_60min_R1 2 SQSSSQGDNPLAPGYLPPHYK 21 0 Q6ZRV2;A0A494C1T9 Q6ZRV2 FAM83H Protein FAM83H 3 S(0.632)QS(0.8)S(0.8)S(0.768)QGDNPLAPGYLPPHYK;S(0.532)QS(0.851)S(0.638)S(0.978)QGDNPLAPGYLPPHYK 133.95 1.5284999999999998e-06 455640000.0 702320.0 668080.0 629620.0 622960.0 644890.0 674440.0 642000.0 617360.0 762960.0 703390.0 True False 663360.9095597903 635984.433991475 670206.3126276184 682165.9311002472 695639.1740778276 670230.5697891854 706899.6253161995 615218.5222529072 624425.6966564403 697158.5118291401 0.9515209214319498 0.9122522686022119 0.9613399266533991 0.9784947318658467 0.9978206710159412 0.9613747209808804 1.0139725949289518 0.8824657689952801 0.895672484896053 1.0 19.41112719111884 -9.878559080492986 5.784386118897125 1.0000000156028768 0.9521312632691968 0.11720462318889113 0.040507687209511416 8.739669861270684e-09 1.7305025856178464e-09 0.041984529347992565 0.01018274072910848 1.3226377669562209e-10 9.878559080492986 -0.04786875233367993 SQS(ph)S(ph)SQFR ddPTM_KYSE-520_SHP099_60min_R1 1 SQSSSQFR 8 0 Q16537;Q16537-2 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 2 S(0.069)QS(0.835)S(0.717)S(0.379)QFR 74.962 0.02412 255280000.0 840440.0 805880.0 787020.0 730020.0 811560.0 833520.0 750940.0 761090.0 892190.0 764560.0 True False 793819.1178243966 767164.3151494595 837752.5684765222 799400.8813114831 875425.1548552493 828317.6925014538 826852.3436681418 758449.9564297416 730190.7862796343 757786.5932186784 1.0475496992532831 1.0123751489069628 1.105525719210986 1.0549155771099739 1.1552396976791373 1.0930751479558334 1.0911414256566725 1.0008753958132799 0.9635836696162285 1.0 19.531432090308737 -7.341044135285311 4.404161412152564 0.9825531940884634 1.0808205214175468 0.566871249509441 0.036922189625298925 0.17729362114251504 6.332196738788401 0.022991218347269762 0.01051704685776869 4.5599057344051315e-08 7.341044135285311 0.09826732732908339 SQS(ph)SDTEQQSPTSGGGK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.034)QS(0.931)S(0.034)DTEQQSPTSGGGK 137.45 1.3666e-05 7934900000.0 1025100.0 1054900.0 954410.0 800380.0 843100.0 1190700.0 983110.0 1252500.0 1309200.0 1135700.0 True False 968235.6595138124 1004221.0205628196 1015932.7957099935 876447.8745569781 909447.1734171961 1183268.3996322604 1082492.3530289873 1248155.3698356983 1071482.2822462667 1125638.5815612308 0.8601656654046943 0.892134506592686 0.9025390674695262 0.7786228092336425 0.8079388787081347 1.051197443846584 0.961669554296548 1.1088420300097923 0.9518883767826697 1.0 20.10231225261426 -6.263284356500025 24.99998936596895 1.0182064916572833 0.8498610623762332 0.7065743449185993 0.05360015331931461 94.87028167611003 1285514.3581430393 0.018559421999865284 0.017210751983739364 5.454006403409693e-07 6.263284356500025 -0.16834542928105012 SQS(ph)SSQFR ddPTM_KYSE-520_SHP099_60min_R1 2 SQSSSQFR 8 0 Q16537;Q16537-2 Q16537 PPP2R5E Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform 1 S(0.001)QS(0.434)S(0.434)S(0.131)QFR;SQS(0.955)S(0.04)S(0.005)QFR 145.99 0.00050408 1592030000.0 5774300.0 5673600.0 5218200.0 5315900.0 5278300.0 5301600.0 5128100.0 4934400.0 6322300.0 5163800.0 True False 5453988.068218324 5401031.739752778 5554573.521415199 5821121.537716391 5693672.180581179 5268510.747871336 5646498.393433028 4917283.718097622 5174329.692213242 5118052.749375605 1.0656373303076454 1.0552903622206113 1.0852904011379814 1.1373703677490543 1.1124684444246493 1.0293975083617664 1.1032513086391875 0.9607723794362071 1.0109957723363643 1.0 22.287163585961093 -7.257953585168889 24.99522026774927 0.9894130548065156 1.0840743958469024 0.6572964155299876 0.03093882876248747 186.79542957115046 1339447.260276073 0.016024832242785086 0.00878503391139126 5.5213644521226925e-08 7.257953585168889 0.0946613410403867 SQS(ph)TTFNPDDMSEPEFK ddPTM_KYSE-520_SHP099_60min_R1 5 SQSTTFNPDDMSEPEFK 17 0 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.001)QS(0.479)T(0.479)T(0.041)FNPDDMSEPEFK;S(0.161)QS(0.752)T(0.084)T(0.003)FNPDDMSEPEFK;SQS(0.953)T(0.023)T(0.023)FNPDDMSEPEFK;SQS(0.971)T(0.027)T(0.002)FNPDDMSEPEFK;S(0.17)QS(0.649)T(0.17)T(0.012)FNPDDMSEPEFK 393.34 1.7891999999999996e-86 2683070000.0 3324030.0 3837940.0 3087280.0 3034080.0 3214560.0 3565900.0 3220980.0 3917440.0 4178400.0 4020820.0 True False 3139639.429610472 3653559.601534613 3286291.0086226542 3322438.0509705856 3467527.5836555343 3543643.895396557 3546588.092135476 3903851.3149773697 3419707.8888922976 3985198.6629506196 0.7878250735148797 0.9167823013444296 0.8246241371037453 0.8336944609207186 0.870101562537461 0.8892013159446517 0.8899400988731642 0.9795876304161407 0.8581022373324707 1.0 21.92622021396897 -7.956845850014549 0.16811339569894787 1.0638264948185234 0.7830000638638958 0.542345994040516 0.04272678010777158 4.034818361385748 0.5277971198302129 0.429659726351979 0.30204783279015374 1.1044705749427947e-08 7.956845850014549 -0.28082643095462767 SQS(ph)TTFNPDDMSEPEFKR ddPTM_KYSE-520_SHP099_60min_R1 5 SQSTTFNPDDMSEPEFKR 18 1 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.119)QS(0.727)T(0.15)T(0.004)FNPDDMSEPEFKR;SQS(0.981)T(0.018)T(0.001)FNPDDMSEPEFKR;S(0.003)QS(0.894)T(0.103)TFNPDDMSEPEFKR;S(0.002)QS(0.969)T(0.028)T(0.001)FNPDDMSEPEFKR;SQS(0.986)T(0.013)TFNPDDMSEPEFKR 233.1 1.2535e-23 6947400000.0 2659500.0 3194310.0 2698290.0 2726460.0 2938600.0 2314510.0 2478000.0 2650120.0 3331160.0 2583830.0 True False 2511972.2334181895 3040850.5528429393 2872226.0908166445 2985581.938659913 3169851.101653154 2300064.284566107 2728500.4229494417 2640927.3522626553 2726305.315709955 2560939.27638932 0.9808792643298558 1.1873965856504995 1.1215518139368807 1.1658152015495262 1.2377689431677357 0.8981330817843438 1.0654295664504654 1.0312338822754559 1.0645724171772575 1.0 21.288241614258535 -6.254898670756186 24.999969176083354 1.0171731430785418 1.141944386075001 0.41066149856618717 0.0757723178623653 548.7884621759783 2097588.1646251874 0.02489734813662767 0.024329600243172357 5.560339755427765e-07 6.254898670756186 0.12477124299645914 SQS(ph)WEERGDR ddPTM_KYSE-520_SHP099_60min_R1 2 SQSWEERGDR 10 1 I1E4Y6;Q6Y7W6;Q6Y7W6-3;Q6Y7W6-4;Q6Y7W6-5;E7ESB6 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 S(0.266)QS(0.734)WEERGDR;SQS(1)WEERGDR 103.46 0.0025261999999999997 692940000.0 1317470.0 1166520.0 1123470.0 1093310.0 1149160.0 1495530.0 1191290.0 1323260.0 1902820.0 1302160.0 True False 1244387.3127886688 1110478.6282177814 1195890.6738155573 1197217.8536843634 1239592.3541740058 1486195.8425313127 1311717.2190699924 1318669.919911205 1557315.8541886976 1290623.875465151 0.9641750291812802 0.8604200257937706 0.9265989081323549 0.9276272324133759 0.9604598037729986 1.151532891018056 1.0163435250236939 1.0217306102724515 1.2066380328098525 1.0 20.299637188820668 -6.079173412928336 5.096392949376805 1.0762909651946977 0.9186651748644213 0.5890036441530324 0.0638615645365446 0.1568376209203195 7.170686875613821 0.020690672866051384 0.020964997949477204 8.333483638219697e-07 6.079173412928336 -0.15762579033027635 SQS(ph)YIPTSGCR ddPTM_KYSE-520_SHP099_60min_R1 5 SQSYIPTSGCR 11 0 A0A087WZ32;A0A087X038;A8K727;Q9HB19;E5RHB5 A0A087WZ32 PLEKHA2 Pleckstrin homology domain-containing family A member 2 1 S(0.001)QS(0.946)Y(0.052)IPTSGCR;SQS(1)YIPTSGCR;SQS(1)YIPTSGCR;SQS(1)YIPTSGCR;SQS(1)YIPTSGCR 222.79 6.0309e-10 2328450000.0 3066720.0 2600550.0 2551970.0 2462920.0 2478920.0 2569700.0 2568770.0 2880440.0 3080580.0 2835700.0 True False 2896602.9282452436 2475615.674494868 2716474.069496369 2696995.1762961 2673996.9008745747 2553661.549118187 2828446.340379277 2870448.4259397504 2521224.327102202 2810577.904141219 1.0306075928289595 0.8808208699168937 0.9665179767811476 0.9595874116573102 0.9514046548699467 0.9085894916328485 1.0063575666099593 1.0213018545795567 0.8970483697987266 1.0 21.42243537369103 -6.778209816108972 24.995033894306495 0.9829520933302726 0.9477688488753261 0.09288087733940453 0.04803368171278604 565.964056038792 843517.7107527914 0.019177975075191214 0.012969321693588456 1.6664419275434957e-07 6.778209816108972 -0.03518324445494647 SQSAAVT(ph)PSSTTSSTR ddPTM_KYSE-520_SHP099_60min_R1 2 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 SQSAAVT(0.891)PS(0.108)S(0.001)TTSSTR;SQSAAVT(0.768)PS(0.187)S(0.026)T(0.007)T(0.002)S(0.003)S(0.003)T(0.003)R 187.75 1.7787e-07 282070000.0 493000.0 863350.0 547060.0 466560.0 501140.0 680720.0 524930.0 723710.0 851340.0 691820.0 True False 465652.30722886464 821873.3700852292 582324.3629269483 510901.7221236206 540576.8669034449 676471.3739797364 577995.0472231043 721199.618925183 696758.1165349358 685691.0130278161 0.6790993295546879 1.1986060112645645 0.8492518523111013 0.7450902992991322 0.7883680209201102 0.9865542367146268 0.842938052623503 1.051785141153551 1.0161400737312432 1.0 19.38719908815996 -7.263601222906055 24.932544414724983 1.0254719628568858 0.8783689921704694 0.20891110510855604 0.1354101295809173 319.9507648927536 3689929.4614915485 0.06969495031760059 0.0360846670348644 5.4500285469590003e-08 7.263601222906055 -0.14710297068641642 SQSAAVTPS(ph)STTSSTR ddPTM_KYSE-520_SHP099_60min_R1 1 SQSAAVTPSSTTSSTR 16 0 Q16186;A0A087WX59 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 1 SQSAAVT(0.346)PS(0.609)S(0.033)T(0.008)T(0.003)S(0.001)STR 71.806 0.018671 651160000.0 505210.0 692170.0 490630.0 452130.0 454450.0 630800.0 485720.0 727740.0 686610.0 683940.0 True False 477184.99418883334 658917.1142316482 522256.7948357559 495100.2992621583 490212.62953320524 626862.9432166212 534821.3177703804 725215.6397957931 561938.9320295678 677880.823697269 0.7039364111027527 0.9720250097027532 0.7704256804127972 0.7303648103833401 0.7231545905953028 0.9247391596027333 0.7889606831675523 1.0698276370178943 0.8289641960435821 1.0 19.37067213397282 -7.237987170074936 24.587039968146875 0.962046948979061 0.8062126136835149 0.3681646919311815 0.09848894017030256 680.1457770676757 713058.7646268758 0.04528940184026727 0.026125473579180547 5.78113125768059e-08 7.237987170074936 -0.15583433529554602 SQSES(ph)SDEVTELDLSHGKK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSESSDEVTELDLSHGKK 19 1 Q86YS7;Q86YS7-3;Q86YS7-2;Q86YS7-4;Q86YS7-5 Q86YS7 C2CD5 C2 domain-containing protein 5 1 S(0.026)QS(0.132)ES(0.491)S(0.35)DEVTELDLSHGKK 108.64 5.8711999999999996e-05 269960000.0 565660.0 456450.0 425310.0 429400.0 364940.0 324420.0 257440.0 327340.0 477310.0 261820.0 True False 534281.7121847466 434521.4568545814 452726.1631200603 470210.046896182 393658.70177543774 322395.1744425114 283464.5475722782 326204.53394173033 390642.5360059312 259500.47849287753 2.058885267910637 1.6744533936052364 1.744606274907066 1.811981425340947 1.516986419684935 1.2423683236150955 1.0923469167324036 1.2570479092611138 1.5053634516386956 1.0 17.985377673207502 -6.004802343864516 2.3391189354317974 1.2249971523912773 1.8116484305675493 0.7746164344112905 0.15316925735764103 0.14720939022964732 1.6175896048230818 0.054538063086611153 0.05937043056635246 9.89003107408819e-07 6.004802343864516 0.586651278176272 SQSLPTTLLS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 3 SQSLPTTLLSPVR 13 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7 P28290-3 SSFA2 Sperm-specific antigen 2 1 SQSLPTTLLS(1)PVR;SQSLPTTLLS(1)PVR;SQSLPTTLLS(1)PVR 216.0 2.8336999999999996e-11 3265920000.0 1674500.0 1724120.0 1246310.0 1067780.0 1003930.0 1739380.0 1053220.0 1510970.0 1841240.0 1543700.0 True False 1581612.1469670061 1641290.6872431196 1326649.1367665075 1169261.4901602378 1082933.579419674 1728523.8842297504 1159689.756036648 1505728.7977330477 1506917.2298832252 1530024.0189804272 1.0337172013946265 1.0727221709479031 0.8670773270935681 0.7642111990760817 0.7077886137639303 1.1297364373283492 0.7579552619111422 0.9841210197055801 0.9848977605511057 1.0 20.545122870472138 -9.35774436160874 17.35940002359186 0.9999999986156267 0.9173615940539418 0.02691312076993646 0.13678864307654245 0.0 0.0 0.13599515539411342 0.032983670015424536 4.3878890571329327e-10 9.35774436160874 -0.08263840456168492 SQSPAAS(ph)DCSSSSSSASLPSSGR ddPTM_KYSE-520_SHP099_60min_R1 1 SQSPAASDCSSSSSSASLPSSGR 23 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.014)QS(0.462)PAAS(0.524)DCSSSSSSASLPSSGR 158.65 1.5300999999999997e-11 1175500000.0 522550.0 674270.0 434100.0 417180.0 408710.0 578300.0 434150.0 600090.0 666990.0 518780.0 True False 493563.1098224007 641877.057100097 462082.78058455745 456828.6617702598 440873.1517582048 574690.6151905075 478038.1188956821 598008.4278520594 545881.4294496162 514184.01280473237 0.9598958690491944 1.2483411407500482 0.8986720105590661 0.8884536477094749 0.8574229084902174 1.1176749974308384 0.9297024158493681 1.1630241566440152 1.0616460563835566 1.0 18.971925228509793 -7.254149480496852 24.825364131784646 1.0842513305750188 0.9888866819957302 0.106275992592889 0.11728978984066189 1163.3675015131446 3961799.671195038 0.05825028990653334 0.032806759523407045 5.5699400329821636e-08 7.254149480496852 -0.09536464857928861 SQSS(ph)DTEQQS(ph)PTSGGGK ddPTM_KYSE-520_SHP099_60min_R1 7 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 SQS(0.005)S(0.995)DTEQQS(1)PTSGGGK;SQS(0.043)S(0.957)DTEQQS(1)PTSGGGK;SQS(0.162)S(0.838)DTEQQS(0.999)PT(0.001)SGGGK;S(0.015)QS(0.134)S(0.851)DTEQQS(0.999)PT(0.001)SGGGK;SQS(0.003)S(0.997)DTEQQS(0.967)PT(0.033)SGGGK;SQS(0.013)S(0.987)DTEQQS(0.905)PT(0.095)SGGGK;S(0.021)QS(0.149)S(0.83)DTEQQS(0.996)PT(0.003)S(0.001)GGGK 361.84 1.4099e-76 8359150000.0 9040660.0 8321980.0 8048620.0 7512220.0 7879320.0 7649520.0 7775460.0 7855090.0 9458150.0 7675850.0 True False 8539156.56769109 7922179.589253355 8567446.923447335 8226179.130168699 8499377.65680179 7601776.508234638 8561479.37797679 7827842.526181783 7740788.380558764 7607847.940720943 1.122414200997016 1.041316762766768 1.1261327763387787 1.0812754400805178 1.1171855330216238 0.9992019513884067 1.1253483829706352 1.0289167958107208 1.0174741189458136 1.0 22.85905698043325 -7.510972068160927 0.746721583854197 0.9955685591572618 1.091636098812155 0.39513923720116395 0.03990824713728621 0.6469131352951867 0.7330266426332068 0.03590862110301413 0.015476689817205166 3.083386253204375e-08 7.510972068160927 0.09606753965489312 SQSS(ph)DTEQQSPTSGGGK ddPTM_KYSE-520_SHP099_60min_R1 9 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.009)QS(0.08)S(0.91)DTEQQSPTSGGGK;SQS(0.001)S(0.999)DTEQQSPTSGGGK;S(0.018)QS(0.123)S(0.859)DTEQQSPTSGGGK;SQS(0.002)S(0.998)DTEQQSPTSGGGK;SQS(0.001)S(0.999)DTEQQSPTSGGGK;SQS(0.003)S(0.997)DTEQQSPTSGGGK;SQS(0.08)S(0.92)DTEQQSPTSGGGK;SQS(0.001)S(0.999)DTEQQSPTSGGGK;SQS(0.017)S(0.983)DTEQQSPTSGGGK 449.39 1.1257999999999998e-118 16457130000.0 13617660.0 12192860.0 10977690.0 10106180.0 10496660.0 11472070.0 10943990.0 11559040.0 13610110.0 11215150.0 True False 12862261.253667792 11607096.703744028 11685329.462325018 11066668.308666192 11322687.424174296 11400468.555781716 12050315.312249599 11518944.388140209 11138857.10695291 11115792.496254664 1.1571159913250972 1.0441987566477966 1.0512367396442721 0.9955806850834051 1.0186127015225719 1.0256100552095562 1.0840716319875359 1.0362683895027172 1.0020749407391345 1.0 23.406107472644717 -4.059096281182396 1.8477856454139827 1.0281369342714426 1.258563204853541 0.7038139313440096 0.02521748546821262 0.9567700064107838 2.140766138781967 0.007113149013427737 0.45313603013875137 8.727778559146656e-05 4.059096281182396 0.2304262705820983 SQSSDT(ph)EQQS(ph)PTSGGGK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.232)QS(0.136)S(0.136)DT(0.497)EQQS(0.997)PT(0.003)SGGGK 91.616 0.012695 0.0 273800.0 242320.0 216880.0 183780.0 273090.0 219010.0 209500.0 197560.0 246930.0 279130.0 True False 258611.768193232 230678.58347026483 230860.43182026947 201246.39594452834 294580.6293304496 217643.0773523654 230678.3045229655 196874.71047085058 202093.73659874 276657.1253598537 0.9347735680288383 0.8338067677462361 0.8344640736073019 0.7274216981860235 1.0647859835429232 0.7866888556341085 0.8338057594682134 0.7116198804378219 0.7304844808745572 1.0 18.077739555596715 SQSSDTEQQS(ph)PTSGGGK ddPTM_KYSE-520_SHP099_60min_R1 11 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SQSSDTEQQS(1)PTSGGGK;SQSSDTEQQS(0.96)PT(0.034)S(0.006)GGGK;SQSSDTEQQS(0.786)PT(0.212)S(0.002)GGGK;SQSSDTEQQS(0.477)PT(0.477)S(0.047)GGGK;SQSSDTEQQS(0.969)PT(0.028)S(0.002)GGGK;SQSSDTEQQS(0.92)PT(0.08)SGGGK;SQSSDTEQQS(0.979)PT(0.019)S(0.002)GGGK;SQSSDTEQQS(0.961)PT(0.039)SGGGK;SQSSDTEQQS(0.499)PT(0.499)S(0.001)GGGK;SQSSDTEQQS(0.813)PT(0.186)SGGGK;SQSSDTEQQS(0.998)PT(0.002)SGGGK 431.72 6.260199999999998e-118 28941510000.0 10109110.0 10936540.0 8013860.0 6844920.0 7050580.0 10015120.0 7923010.0 10069660.0 11466430.0 10041290.0 True False 9548337.516288819 10411132.202318773 8530446.23822936 7495459.138799751 7605420.533687371 9952611.921159869 8723945.171926018 10034730.699736312 9384415.357177714 9952331.982605413 0.9594070548467745 1.046099770437245 0.8571303944782781 0.7531359637017978 0.7641847706628004 1.0000281279357386 0.8765729667351976 1.0082793376743175 0.9429363262378809 1.0 23.246603179960513 -7.2570263230465395 24.705713001599864 0.9817058749239419 0.8919329281646786 0.1756131332017674 0.08920761372134213 632.6611963453471 3541865.512674433 0.04860056895349562 0.026822090887368887 5.533165710984746e-08 7.2570263230465395 -0.08977294675926328 SQSSDTEQQSPT(ph)SGGGK ddPTM_KYSE-520_SHP099_60min_R1 2 SQSSDTEQQSPTSGGGK 17 0 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 SQSSDTEQQS(0.081)PT(0.917)S(0.002)GGGK;SQSSDTEQQS(0.289)PT(0.71)S(0.001)GGGK 340.33 4.183199999999999e-62 17210600000.0 4085300.0 4341800.0 3419300.0 2827160.0 2820110.0 3759600.0 3375300.0 4067000.0 4617200.0 3991600.0 True False 3858680.265156355 4133213.4108253387 3639713.549073436 3095852.4363833517 3042036.6127690305 3736134.9418471907 3716508.263753531 4052892.5262449356 3778832.8701401316 3956237.5294178086 0.9753408981295899 1.04473338117127 0.9199936864278845 0.7825244094580263 0.7689216307537252 0.9443656792763382 0.9394047339469135 1.0244310398727121 0.9551582386147114 1.0 21.91569761630738 -6.883069101745069 2.542256210348529 0.9907790464485292 0.8999358765240417 0.19436174528202588 0.07899607405737612 0.5489889020602662 7.174742717319785 0.04526837091007006 0.0277138938698978 1.3089736321680915e-07 6.883069101745069 -0.09084316992448749 SQST(ph)TFNPDDMSEPEFK ddPTM_KYSE-520_SHP099_60min_R1 1 SQSTTFNPDDMSEPEFK 17 0 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.001)QS(0.095)T(0.864)T(0.04)FNPDDMSEPEFK 172.37 1.0727999999999999e-07 674650000.0 512270.0 587650.0 503840.0 506640.0 501510.0 547090.0 497830.0 697120.0 731030.0 710300.0 True False 483853.3619150723 559418.4119193676 536318.3325725028 554790.9132731295 540975.9837984326 543675.4083772692 548155.5147525918 694701.8534290317 598293.3797666428 704007.2946050373 0.6872845858600429 0.7946201924416322 0.7618079197224632 0.78804710906352 0.7684238330256669 0.7722582032083664 0.7786219247346271 0.9867821807425643 0.8498397450587466 1.0 19.425230851930053 -7.228875748808043 9.898783607588378 0.9386939837202379 0.7667743878403362 0.7598707897882159 0.04659353472658464 0.24931358720871333 74.77531016528273 0.020535434383596063 0.011743648953025118 5.903699602337292e-08 7.228875748808043 -0.1719195958799017 SQT(ph)PERPAK ddPTM_KYSE-520_SHP099_60min_R1 5 SQTPERPAK 9 1 A8CG34-2;A8CG34;Q96HA1-2;Q96HA1-3;Q96HA1;A6NF01;C9JFL1 A8CG34-2 POM121C;POM121;POM121B Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121;Putative nuclear envelope pore membrane protein POM 121B 1 S(0.007)QT(0.993)PERPAK;S(0.003)QT(0.997)PERPAK;S(0.201)QT(0.799)PERPAK;S(0.01)QT(0.99)PERPAK;S(0.045)QT(0.955)PERPAK 103.43 0.0032764000000000005 2272870000.0 3309360.0 3374830.0 2925230.0 2806880.0 2977660.0 3415460.0 3291260.0 3501580.0 3841160.0 3449780.0 True False 3125783.203754396 3212698.1010768954 3113795.006333486 3073645.031280757 3211984.9014321556 3394142.8472394454 3623972.680402171 3489433.836254919 3143702.1717637237 3419217.633088227 0.9141808270716006 0.9396003547674724 0.9106747041197012 0.8989322591041536 0.939391769143136 0.9926665136474118 1.0598835959818709 1.0205357513623001 0.9194214902677433 1.0 21.705234822509215 -6.207186049474659 3.3465969217844624 1.0045015907224728 0.9175919906580813 0.571692633587941 0.03404112880046061 0.18521471080900917 4.178667131538779 0.01247077215613181 0.01208303763238215 6.206031141607279e-07 6.207186049474659 -0.08690960006439152 SQT(ph)PERPAKK ddPTM_KYSE-520_SHP099_60min_R1 5 SQTPERPAKK 10 2 A8CG34-2;A8CG34;Q96HA1-2;Q96HA1-3;Q96HA1;A6NF01;C9JFL1 A8CG34-2 POM121C;POM121;POM121B Nuclear envelope pore membrane protein POM 121C;Nuclear envelope pore membrane protein POM 121;Putative nuclear envelope pore membrane protein POM 121B 1 S(0.174)QT(0.826)PERPAKK;S(0.287)QT(0.713)PERPAKK;SQT(1)PERPAKK;S(0.009)QT(0.991)PERPAKK;S(0.031)QT(0.969)PERPAKK 117.07 0.001009 14549500000.0 6026670.0 5873340.0 5431710.0 5478930.0 5643230.0 5037320.0 5224570.0 5213480.0 7176430.0 5038850.0 True False 5692358.601231206 5591175.930336931 5781846.717643288 5999645.859899634 6087320.095413507 5005880.217381025 5752720.522489505 5195395.654715378 5873371.21507835 4994209.709165975 1.1397916652926896 1.1195316688595056 1.1577100390942228 1.2013203708463345 1.2188755478652256 1.0023368078023696 1.1518780462765548 1.0402838401399448 1.1760361612967176 1.0 22.251824971291473 -6.250218558259706 24.97433950303966 1.0814854005549095 1.1661249947612646 0.37749510490851146 0.059542796328704885 862.2611045931172 1919146.5496055987 0.01913534431168992 0.018962889314453956 5.620583986832005e-07 6.250218558259706 0.08463959420635514 SQT(ph)PPGVAT(ph)PPIPK ddPTM_KYSE-520_SHP099_60min_R1 1 SQTPPGVATPPIPK 14 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 2 S(0.294)QT(0.706)PPGVAT(1)PPIPK 131.56 0.0011958000000000001 0.0 386840.0 342230.0 351470.0 298400.0 300550.0 315740.0 319240.0 339090.0 394310.0 321460.0 True False 365381.21405357827 325788.75710229727 374126.3185718831 326759.846282769 324201.5751044222 313769.3495421937 351511.89468215517 337913.7759342013 322713.2437462001 318612.1144920954 1.1467900856062494 1.0225247009883547 1.1742375809164811 1.025572573734875 1.0175431515566729 0.9848004368646759 1.10325966494559 1.0605804379813837 1.0128718559890366 1.0 18.281441597500265 -5.305279865772013 24.98101616578578 1.0325028180315352 1.1053182423476837 0.3927455863654352 0.048071397414590274 503.88820627296633 287122.77067700843 0.013308914177939415 0.01974060238217258 4.951310182424281e-06 5.305279865772013 0.07281542431614851 SQT(ph)PPGVATPPIPK ddPTM_KYSE-520_SHP099_60min_R1 4 SQTPPGVATPPIPK 14 0 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.044)QT(0.956)PPGVATPPIPK;S(0.022)QT(0.978)PPGVATPPIPK;S(0.037)QT(0.962)PPGVATPPIPK;S(0.011)QT(0.989)PPGVATPPIPK 153.38 8.1531e-06 6643540000.0 4835510.0 6420300.0 4508690.0 4011640.0 4189280.0 6113600.0 4854960.0 5825900.0 6499200.0 5785010.0 True False 4567274.6209497955 6111859.150933227 4799327.371559067 4392905.0594564555 4518952.50225738 6075442.754675233 5345746.736643516 5805691.312675275 5319109.111499336 5733759.312069669 0.7965584832512237 1.0659427468585314 0.8370297932556034 0.7661474471398388 0.7881308328978688 1.0595915217240308 0.932328415912161 1.0125453470734616 0.9276826636762573 1.0 22.451049914681914 -6.259615736353186 24.997686842332552 0.9838323498383927 0.8572526618624936 0.384224331673821 0.08564637827024585 202.451229198785 2775119.180639231 0.030347772600134198 0.028884586013103605 5.500273226557954e-07 6.259615736353186 -0.12657968797589914 SQT(ph)PPRR ddPTM_KYSE-520_SHP099_60min_R1 3 SQTPPRR 7 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.128)QT(0.872)PPRR;S(0.012)QT(0.988)PPRR;S(0.005)QT(0.995)PPRR 86.67 0.014712000000000001 1200520000.0 467080.0 386899.0 387418.0 334849.0 355286.0 415515.0 361528.0 380825.0 463840.0 375702.0 True False 441170.1412991036 368311.7912927612 412391.584170717 366672.94828397693 383244.98689918424 412921.6167575366 398074.7784132636 379504.00696022314 379618.34845486435 372373.5725717328 1.1847514802198216 0.9890921870450698 1.107467378317443 0.984691114763098 1.0291949137323841 1.1088907676926851 1.0690199512925418 1.0191486048251095 1.0194556660750567 1.0 18.506391162605798 -4.248227584832347 24.577490182877316 1.0406029533895718 1.1847515992893627 0.5164775655716989 0.04290377382735264 1450.9096033544874 2699025.7444367823 0.010520248042671035 0.1889255125086194 5.646410065000985e-05 4.248227584832347 0.14414864589979093 SQTGDVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 SQTGDVSPK 9 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2;H0YBM4 H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 SQTGDVS(1)PK;SQTGDVS(1)PK;SQTGDVS(1)PK;SQTGDVS(1)PK;SQTGDVS(1)PK 172.28 7.2142e-05 5403000000.0 11655140.0 10665840.0 9427220.0 9583460.0 10898350.0 10984560.0 10355800.0 10588010.0 13253300.0 10720070.0 True False 11008606.150254428 10153437.036647778 10034913.685285306 10494269.157027679 11755988.141870826 10916001.286524365 11402665.326868372 10551282.664570104 10846834.808504783 10625098.519888261 1.0360945011143483 0.9556087426052927 0.944453707088152 0.9876867623753611 1.106435683383617 1.0273788300495836 1.0731820797260982 0.9930526898004769 1.0208691042442073 1.0 23.340972882732018 -5.546616526102486 24.994722337749955 1.0386587087164023 0.9746849817405179 0.33492660843959343 0.03853914086791765 237.78715254209055 250376.80688762723 0.011345611676959468 0.014647910794622868 2.840425964443635e-06 5.546616526102486 -0.06397372697588444 SQTKEPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 SQTKEPTPK 9 1 P26358;P26358-2 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 S(0.001)QT(0.03)KEPT(0.969)PK;SQT(0.002)KEPT(0.998)PK;SQTKEPT(1)PK;SQT(0.007)KEPT(0.993)PK;SQT(0.001)KEPT(0.999)PK;SQT(0.028)KEPT(0.972)PK 116.71 0.0014747 5433930000.0 11453880.0 11787380.0 9986470.0 7322870.0 8293220.0 10171670.0 8318570.0 9845790.0 12862820.0 11416350.0 True False 10818510.44365629 11221096.571581898 10630213.835116958 8018833.3630988505 8945849.232032932 10108184.834540598 9159492.237019587 9811637.252514672 10527256.133305006 11315210.020785911 0.9561033709301736 0.9916825715977762 0.9394623533800414 0.7086773774740677 0.7906039053273877 0.8933271955157684 0.8094849516883651 0.8671193229724244 0.9303632998385851 1.0 23.43176002682203 -5.018519477440985 24.768974306996466 0.8464385819159608 0.9718128767951054 0.2887893288396728 0.0757321115713128 713.5706476416308 954371.6838074296 0.020336791099595318 0.036067558594731056 9.582537391331207e-06 5.018519477440985 0.12537429487914464 SQTTS(ph)LENGVFPR ddPTM_KYSE-520_SHP099_60min_R1 2 SQTTSLENGVFPR 13 0 A0A087WX11;J3KNG8;Q8TF40-3;Q8TF40;Q8TF40-2 A0A087WX11 FNIP1 Folliculin-interacting protein 1 1 SQTT(0.007)S(0.993)LENGVFPR;SQT(0.002)T(0.03)S(0.968)LENGVFPR 128.3 5.125e-05 461340000.0 992420.0 836170.0 820070.0 711660.0 774540.0 895120.0 721660.0 779540.0 1035870.0 822110.0 True False 937368.4842597768 795999.138083242 872933.0243583919 779295.9524316182 835491.891470236 889533.2240520943 794612.4355228804 776835.9576860046 847782.1201576848 814826.744991902 1.1503899326096527 0.9768937298335155 1.0713112078409592 0.9563946657634109 1.0253613993469732 1.0916838819041643 0.9751918925179334 0.9533756255064075 1.0404446409845203 1.0 19.636133808979622 -4.2526370640447135 24.448381143501013 1.010790306191542 1.150390030788966 0.4686400150470056 0.04481767029141847 751.6952179683364 2087767.473469754 0.011087559401523894 0.12480633170307424 5.589370982742112e-05 4.2526370640447135 0.1395997245974241 SQVEEELFSVR ddPTM_KYSE-520_SHP099_60min_R1 2 SQVEEELFSVR 11 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ; 115.65 0.001994 80112000.0 95397.0 153003.0 104237.0 84032.0 128131.0 108847.0 111418.0 120813.0 147927.0 99534.0 False True 90105.13824079512 145652.506217815 110956.28380509697 92018.37601485792 138214.18073433623 108167.64549825538 122681.21877489155 120393.92790096626 121067.18573620809 98652.20619628018 0.9133616136421757 1.4764242162818153 1.124721768353932 0.9327553793553944 1.4010247318680622 1.0964543994388034 1.2435729874180697 1.2203875872925574 1.227212146632896 1.0 16.590063694389237 -4.021872058519652 15.737920358398258 1.1934264440570956 0.7865962906559725 0.2196375634462534 0.15717981649471308 870929.0706071319 38290897.97315853 0.03731338314115071 4245501.277634489 9.508848794183816e-05 4.021872058519652 -0.40683015340112316 SQVPPFDSHEVAEVGFS(ph)S(ph)NDDEDKDDDVIEVTGK ddPTM_KYSE-520_SHP099_60min_R1 1 SQVPPFDSHEVAEVGFSSNDDEDKDDDVIEVTGK 34 1 H0Y760;Q9Y4B4 H0Y760 RAD54L2 Helicase ARIP4 2 SQVPPFDSHEVAEVGFS(1)S(1)NDDEDKDDDVIEVTGK 107.47 0.00060388 98516000.0 54171.0 50055.0 40728.0 49396.0 43366.0 45803.0 43622.0 57895.0 68919.0 43437.0 True False 51166.02664278873 47650.282665913255 43353.39204710403 54090.58098855103 46778.65748121237 45517.126487239824 48031.73746969358 57694.17575779458 56405.0469066074 43052.18197347465 1.188465352913197 1.1068029651847051 1.0069963950680818 1.256395808739203 1.0865571810049879 1.0572548103435007 1.11566325486794 1.3400987618546527 1.3101553584754362 1.0 15.393798737788021 -7.219243381660771 20.207203392287845 1.243845035917947 1.1141694074090478 0.1404413119853597 0.10696482499789686 72.70406856341337 34816.82594046799 0.04847333640546474 0.02798420049469893 6.036102671656287e-08 7.219243381660771 -0.12967562850889913 SQYPQSDDKLS(ph)PPKR ddPTM_KYSE-520_SHP099_60min_R1 2 SQYPQSDDKLSPPKR 15 2 Q8WZ64 Q8WZ64 ARAP2 Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 1 SQYPQS(0.009)DDKLS(0.991)PPKR;SQYPQS(0.033)DDKLS(0.967)PPKR 67.449 0.029013999999999998 0.0 665710.0 592790.0 505310.0 520630.0 497200.0 511600.0 516530.0 557110.0 658310.0 507110.0 True False 628781.7392400154 564311.4786040691 537883.0911245856 570110.5186668828 536326.8113189783 508406.914631616 568745.8932470042 555177.5154404514 538777.4986446231 502617.3999256099 1.2510146670868907 1.1227456086629517 1.0701640874434415 1.134283291329075 1.067067736609114 1.0115187311598504 1.1315682531706657 1.1045728132822714 1.071943587158672 1.0 18.939101090645178 -2.019598838441194 0.9857375215323089 1.0757186999086927 17.185491480352034 0.6209910193023488 0.04174684940858233 106.75486573506203 1.5052605282657296 0.013246572651346775 3757.1178684084557 0.009558751284534121 2.019598838441194 16.109772780443343 SRADLES(ph)PQRK ddPTM_KYSE-520_SHP099_60min_R1 1 SRADLESPQRK 11 2 A0A087X1K6;Q9Y2Y9 A0A087X1K6 KLF13 Krueppel-like factor 13 1 SRADLES(1)PQRK 84.75299999999999 0.0031869 0.0 632930.0 590850.0 552320.0 542830.0 601280.0 566760.0 421570.0 602030.0 688690.0 451500.0 True False 597820.1111853264 562464.6791160697 587923.4309432463 594420.3999922087 648597.315184784 563222.6406110532 464186.40972671384 599941.698444859 563641.2564621002 447500.06126168446 1.3359106801009784 1.256904138806715 1.3137951965540549 1.3283135611563854 1.4493792768566884 1.258597907278716 1.037287924426164 1.340651656568224 1.259533361566402 1.0 18.77152835431521 -6.523369643738089 24.999826063834888 1.1820682997719738 1.3329949384595758 0.39262908702168653 0.10246653632613116 21.034179416758075 1071068.5501800415 0.03874456522723595 0.03029595897811853 2.99661090935255e-07 6.523369643738089 0.15092663868760203 SRADLT(ph)AEMISAPLGDFR ddPTM_KYSE-520_SHP099_60min_R1 1 SRADLTAEMISAPLGDFR 18 1 Q9H3Q1;Q9H3Q1-2;J3KRZ9;J3QQS6;J3QR93 Q9H3Q1 CDC42EP4 Cdc42 effector protein 4 1 S(0.376)RADLT(0.623)AEMIS(0.001)APLGDFR 57.238 0.034839 80158000.0 116770.0 124230.0 106770.0 95808.0 101480.0 90998.0 92254.0 98136.0 102010.0 95841.0 True False 110292.5353247759 118261.80432696838 113652.56503804009 104913.56351427455 109465.89865778321 90430.04772800583 101579.93463227512 97795.5891211145 83487.55546283361 94991.92330316959 1.161072767973904 1.2449669426055547 1.1964445090275149 1.104447197889022 1.1523705895333805 0.9519761742205766 1.0693533839511775 1.0295147810514051 0.8788910947342392 1.0 16.535517232931824 -5.997960945274638 0.8224398665360029 0.9726540736450944 1.2153431918585225 0.7166821652186903 0.05808065336619165 0.33734582388009426 0.5047820141361504 0.03388041511154102 0.04287658962003632 1.0047061362524075e-06 5.997960945274638 0.2426891182134281 SRAPGPRDT(ph)DDDEEEPDPYGFIVQTAEIAEIAR ddPTM_KYSE-520_SHP099_60min_R1 3 SRAPGPRDTDDDEEEPDPYGFIVQTAEIAEIAR 33 2 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 S(0.39)RAPGPRDT(0.52)DDDEEEPDPY(0.09)GFIVQTAEIAEIAR;S(0.11)RAPGPRDT(0.89)DDDEEEPDPYGFIVQTAEIAEIAR;S(0.171)RAPGPRDT(0.829)DDDEEEPDPYGFIVQTAEIAEIAR 281.4 1.7800000000000002e-53 437645000.0 109756.0 124250.0 141802.0 116276.0 103950.0 100930.0 101886.0 100971.0 188396.0 95291.0 True False 103667.61588683842 118280.84349694767 150942.78381122195 127326.83608034572 112130.2736054058 100300.05843191744 112185.63119153632 100620.7551678086 154188.03547667857 94446.79587527612 1.0976297811493687 1.2523542212395022 1.5981779203029067 1.34813293453057 1.1872321614116164 1.0619741781856844 1.1878182859658428 1.0653697061431882 1.632538553031435 1.0 16.52721423330169 -5.7640921980177895 23.276011473001113 1.1859979932159714 1.3385297943835455 0.09732120586159643 0.19922351098539495 66.77463828736151 585890.1967006818 0.06106617179169333 0.07250877658434397 1.7215030717936086e-06 5.7640921980177895 0.15253180116757403 SRAS(ph)PATHRR ddPTM_KYSE-520_SHP099_60min_R1 1 SRASPATHRR 10 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.093)RAS(0.825)PAT(0.081)HRR 85.536 0.0027137 470330000.0 37009.0 37543.0 5812.7 65457.0 21716.0 30290.0 13353.0 52093.0 17264.0 11098.0 True False 34956.03699438756 35739.37792680813 6187.395942648832 71678.0135996354 23424.925652861857 30100.94887449498 14702.851552721515 51912.301541597626 14129.292790024094 10999.680354113345 3.1779138910446343 3.2491287724959514 0.5625068859691952 6.516372411933889 2.1296005791752006 2.7365294177151878 1.3366617101035454 4.719437280937437 1.2845184891886814 1.0 13.425173979823395 -7.964111567707705 21.697044036525224 0.9999978094483766 2.9943551242729414 0.19009040699737534 1.5797223013238608 56.5074468890745 34161.98432494573 1.451208753419885 0.3747005135999441 1.0861465630861806e-08 7.964111567707705 1.9943573148245648 SRAS(ph)PVSR ddPTM_KYSE-520_SHP099_60min_R1 6 SRASPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.003)RAS(0.997)PVSR;S(0.2)RAS(0.792)PVS(0.008)R;S(0.039)RAS(0.957)PVS(0.004)R;S(0.104)RAS(0.869)PVS(0.028)R;S(0.173)RAS(0.827)PVSR;S(0.258)RAS(0.739)PVS(0.003)R 91.70100000000001 0.0060523999999999994 47983610000.0 622919.0 563778.0 528766.0 446820.0 510921.0 533175.0 475270.0 491173.0 558237.0 510585.0 True False 588364.4413117591 536693.2586319695 562851.1024155132 489285.63845866785 551127.5759571668 529847.2570537754 523314.92978820886 489469.2355036396 456875.23280958546 506061.6141291191 1.1626340051977164 1.0605294763475872 1.1122185257700747 0.9668499344702898 1.0890523220292092 1.0470014762245679 1.0340933103349104 0.9672127303035357 0.9028055478893051 1.0 18.948953521386056 -2.20456086988573 0.23649838101015513 0.9557168283786704 1.615762344865347 0.5414923959570856 0.04971529102851946 23.52252238806066 0.5110127178686231 0.07337936295075301 5.39488231500786 0.006243658342238847 2.20456086988573 0.6600455164866766 SRASPVSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRASPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 64.04 0.032995 470180000.0 223810.0 224750.0 212550.0 216880.0 230200.0 215760.0 217600.0 215540.0 229930.0 213320.0 False True 211394.8131458262 213952.67264337235 226251.31309202453 237492.20999265052 248315.43034116793 214413.36180789166 239597.1315713472 214792.34204741416 188180.50806361448 211430.15076044842 0.9998328638820191 1.0119307576230316 1.0700995684781427 1.1232655755977328 1.1744561002678882 1.014109676584506 1.1332212114005071 1.0159021373010093 0.8900362951394954 1.0 17.68982159974262 -7.5320832679766 7.10922768802737 0.9466112042146446 1.075951444767028 0.43713465280387875 0.05918905407956191 0.13101727310061756 37.23642869979942 0.03980226681730917 0.01576481013189385 2.937086465680723e-08 7.5320832679766 0.12934024055238336 SRDAT(ph)PPVS(ph)PINMEDQER ddPTM_KYSE-520_SHP099_60min_R1 6 SRDATPPVSPINMEDQER 18 1 P17275 P17275 JUNB Transcription factor jun-B 2 S(0.003)RDAT(0.997)PPVS(1)PINMEDQER;S(0.02)RDAT(0.98)PPVS(1)PINMEDQER;SRDAT(1)PPVS(1)PINMEDQER;S(0.13)RDAT(0.87)PPVS(1)PINMEDQER;S(0.093)RDAT(0.907)PPVS(1)PINMEDQER;S(0.135)RDAT(0.865)PPVS(1)PINMEDQER 151.16 5.2594e-07 3375800000.0 3578560.0 3427460.0 3279390.0 3059580.0 3587960.0 3262280.0 3189970.0 3162080.0 4407420.0 3328470.0 True False 3380050.1431175033 3262799.6768776556 3490784.726609525 3350361.56330373 3870312.039300162 3241918.900438678 3512443.298707036 3151111.482515023 3607143.630016679 3298982.3453104715 1.024573577340379 0.9890321727595027 1.0581398629100582 1.0155742627923712 1.1731836166998104 0.9827027128675273 1.064705091162431 0.9551768250576885 1.0934110135946198 1.0 21.65358962658404 -4.764474904883965 24.98918669976215 1.0435722383615185 1.006802874228493 0.056344066500318535 0.05897007647620457 220.47511834278646 1815074.098961851 0.014778301460582618 0.0329503089126045 1.7199867254607246e-05 4.764474904883965 -0.03676936413302556 SRDEDNDEDEERLEEEEQNEEEEVDN ddPTM_KYSE-520_SHP099_60min_R1 2 SRDEDNDEDEERLEEEEQNEEEEVDN 26 2 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 0 ; 191.42 2.9685e-14 1617560000.0 229010.0 313670.0 402990.0 180692.0 272460.0 308700.0 219720.0 218920.0 452110.0 281760.0 False True 216306.35877988322 298600.82237173157 428967.3802067977 197864.91335296925 293901.05191465945 306773.288793549 241931.44186055375 218160.61761631197 370018.22076562734 279263.8256059628 0.7745591764723884 1.069242755390213 1.5360649710931928 0.7085232500973964 1.0524136138181734 1.098507077054805 0.8663185836389548 0.7811989868108927 1.3249772682256302 1.0 18.091269180890833 SRDEWDK ddPTM_KYSE-520_SHP099_60min_R1 1 SRDEWDK 7 1 A0A590UK85;A0A590UJY6;A0A5F9UK94;H0Y360;Q01433-3;Q01433-5;Q01433-2;Q01433-4;Q01433 A0A590UK85 AMPD2 AMP deaminase 2 0 95.815 0.041772000000000004 0.0 212460.0 271520.0 364590.0 306930.0 126280.0 236530.0 176910.0 177910.0 174240.0 252820.0 False True 200674.42027149015 258475.77164017086 388092.05476462556 336100.53491813067 136217.51756508532 235053.72853365156 194793.7892752162 177292.87173450633 142602.4082329588 250580.21149098355 0.800839056992778 1.0315091127994813 1.5487737537430804 1.3412892140137105 0.5436084388091704 0.9380378727236781 0.7773709987559226 0.7075294201389312 0.5690888653356012 1.0 17.9349129628753 -5.756496923717367 24.999826802185492 0.7514922464889043 1.1962511899866142 0.46115598736743035 0.2245982448384249 115.15578871379745 582474.7876016833 0.07055019016021886 0.08820455033628934 1.751874843399318e-06 5.756496923717367 0.44475894349770984 SRDPQLCR ddPTM_KYSE-520_SHP099_60min_R1 2 SRDPQLCR 8 1 I3L4S2;Q8TAT6;Q8TAT6-2 I3L4S2 NPLOC4 Nuclear protein localization protein 4 homolog 0 ; 119.86 0.001045 583170000.0 370062.0 334440.0 270730.0 233469.0 323598.0 337330.0 278761.0 283135.0 320520.0 251270.0 False True 349533.9231596925 318373.00039532554 288181.6889833156 255657.82356498536 349063.3215792409 335224.59834379004 306940.88232518535 282152.8707692055 262321.64765167545 249043.94328510202 1.4035030065338747 1.2783808198493571 1.1571519675682667 1.026557081423626 1.4016133738279195 1.3460459785606174 1.2324768001838282 1.1329441184048425 1.0533147049931397 1.0 17.926040799726373 -7.537757837503642 1.917596987734597 1.013071202061993 1.2606532002934183 0.45128503467003067 0.10694028100015059 0.3662548828540348 2.4296575058570227 0.10170440529568271 0.032839824194374014 2.898959596274771e-08 7.537757837503642 0.24758199823142535 SRDS(ph)DESGDKTTR ddPTM_KYSE-520_SHP099_60min_R1 3 SRDSDESGDKTTR 13 2 H0YDU3;A0A0A0MSK5;J3KN66;Q5JTV8-2;Q5JTV8;Q5JTV8-3;H0YD16 H0YDU3 TOR1AIP1 Torsin-1A-interacting protein 1 1 SRDS(0.999)DESGDKTTR;SRDS(0.999)DESGDKTTR;S(0.009)RDS(0.95)DES(0.04)GDKT(0.001)T(0.001)R 130.39 2.8972e-05 559691000.0 315245.0 350904.0 279526.0 320666.0 351376.0 380823.0 371442.0 291788.0 436751.0 335136.0 True False 297757.7314246723 334046.0451223578 297544.6932174136 351142.0002282517 379027.29214404075 378446.14239788085 408990.9822845794 290775.85553183104 357448.0279967454 332166.9557718628 0.8964098512832707 1.0056570628650539 0.8957684924618803 1.0571250213986403 1.1410746480283918 1.1393250768080714 1.231281363717228 0.8753906747170245 1.0761095340327773 1.0 18.341549034446174 -5.371389621518633 5.353648349684316 1.0829927866597855 0.9406111082198658 0.3254078516166723 0.09324735768005553 0.2798429291975187 11.453986784224249 0.027472645745372382 0.041207248806429626 4.2521676439869655e-06 5.371389621518633 -0.14238167843991967 SRDS(ph)FLKR ddPTM_KYSE-520_SHP099_60min_R1 1 SRDSFLKR 8 2 P46778;M0R181 P46778 RPL21 60S ribosomal protein L21 1 S(0.008)RDS(0.992)FLKR 47.894 0.060549 527930000.0 708100.0 614310.0 532350.0 500230.0 605680.0 592520.0 590010.0 593540.0 712720.0 493850.0 True False 668820.2814376459 584797.6255018918 566666.1327901164 547771.7088003666 653343.5701522096 588821.8628958663 649653.9687426967 591481.1482732774 583308.0142091037 489474.87320948567 1.366403707410337 1.1947449348469619 1.157702190256443 1.1191007726476923 1.3347846966448702 1.2029664751429683 1.3272468196026428 1.2083994105661378 1.1917016503510267 1.0 18.900875276601855 -8.288739030156075 1.9351135207367511 1.0001879067130113 1.2358503528767035 0.46781629229990906 0.07633627727876664 1.1553534156419394 6.321831680607327 0.07405811600096278 0.020620754471481224 5.1435263594874655e-09 8.288739030156075 0.23566244616369225 SRDS(ph)GDENEPIQER ddPTM_KYSE-520_SHP099_60min_R1 5 SRDSGDENEPIQER 14 1 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-4;Q8WX93-7 Q8WX93-3 PALLD Palladin 1 S(0.081)RDS(0.919)GDENEPIQER;S(0.375)RDS(0.625)GDENEPIQER;S(0.001)RDS(0.999)GDENEPIQER;SRDS(1)GDENEPIQER;SRDS(1)GDENEPIQER 216.53 8.4123e-14 803780000.0 1236090.0 1184990.0 1114920.0 1035660.0 1150960.0 1168070.0 1068860.0 1114020.0 1465490.0 1162430.0 True False 1167521.6236156763 1128061.3016937478 1186789.5271350732 1134088.8150174671 1241534.003933407 1160779.6418564336 1176910.799868339 1110155.7246342218 1199393.9579965498 1152131.7745568543 1.0133577160171123 0.9791078821063114 1.0300814137267844 0.9843395001007355 1.0775972257261452 1.007505970662866 1.0215071104353628 0.9635666241921175 1.0410215085491188 1.0 20.13587430314205 -4.765902814918306 24.99968371040365 1.0154062304382 0.9962328006794551 0.061062494000173495 0.03052085117303608 315.86455298731903 1769182.666713185 0.007733691671315201 0.01708497036557627 1.7143408945137046e-05 4.765902814918306 -0.01917342975874503 SREDLS(ph)AQPVQTK ddPTM_KYSE-520_SHP099_60min_R1 1 SREDLSAQPVQTK 13 1 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.206)REDLS(0.794)AQPVQTK 101.61 0.0032049 2712000000.0 4298600.0 4018400.0 3764600.0 3623300.0 4102000.0 3910400.0 4022700.0 3956200.0 4918900.0 3770200.0 True False 4060148.0889533414 3825350.0322586307 4007272.1395729696 3967657.342615131 4424804.062812644 3885993.7431107685 4429353.773768656 3942476.865584022 4025751.7553782165 3736798.9611712173 1.0865310473327625 1.0236970390988491 1.072380982014879 1.0617797167690166 1.1841161670163243 1.039925825148696 1.1853337093575869 1.0550412014534332 1.0773262884114143 1.0 21.833371518506265 -1.2082332258109152 13.193537611708653 1.0827986699353218 1.1002057521559074 0.0 0.05859185278320681 0.0 0.0 0.01284547507975951 0.0 0.06191085107263209 1.2082332258109152 0.017407082220585623 SREDMIDIK ddPTM_KYSE-520_SHP099_60min_R1 3 SREDMIDIK 9 1 P20340-4;P20340-2;P20340;F5H3K7;P20340-3 P20340-4 RAB6A Ras-related protein Rab-6A 0 ;; 104.79 0.001898 894620000.0 884720.0 874050.0 504630.0 595000.0 844550.0 857820.0 596870.0 791610.0 767750.0 681210.0 False True 835642.8179544047 832059.3260242022 537159.2572365475 651548.6211067264 911011.2801678259 852466.0271878266 657207.444489844 788864.0896731634 628345.9534025141 675175.0093733604 1.2376684657359827 1.2323609648947882 0.7955852183200511 0.9650070160497172 1.3492965046401058 1.262585278413981 0.9733882850607988 1.1683846095034225 0.9306416035535601 1.0 19.364901980199395 -7.765102164530502 24.997357501019533 0.9653207483354845 1.11770174614877 0.13431333059784756 0.15970012758617402 225.3248555152177 1537656.9509154088 0.14440172501614848 0.0429279500897869 1.7175043095809105e-08 7.765102164530502 0.1523809978132854 SREDSWLK ddPTM_KYSE-520_SHP099_60min_R1 1 SREDSWLK 8 1 F8WBI5;O75323-2;O75323 F8WBI5 GBAS Protein NipSnap homolog 2 0 73.233 0.021037 344840000.0 209590.0 223160.0 134830.0 160920.0 240730.0 278840.0 216510.0 195030.0 262990.0 223550.0 False True 197963.6248926934 212439.05863001084 143521.35753562753 176213.788417638 259674.08143366335 277099.65612955386 238396.94373397285 194353.48645034412 215237.64543839404 221569.52091926796 0.8934605448951811 0.9587918850418784 0.6477486476487061 0.7952979619513824 1.171975641578786 1.2506217235109656 1.075946469283725 0.8771670654158231 0.9714226241289702 1.0 17.75739991248963 -5.748789943110976 24.98007819111095 1.0622567923923663 0.820888342081264 0.46840945906651066 0.12206896864743226 225.76443286094045 445837.04883898026 0.040570767595544004 0.05201876693014702 1.7832410659877447e-06 5.748789943110976 -0.2413684503111022 SREDVSNFDPDFIKEEPVLT(ph)PIDEGHLPMINQDEFR ddPTM_KYSE-520_SHP099_60min_R1 1 SREDVSNFDPDFIKEEPVLTPIDEGHLPMINQDEFR 36 2 P24723-2;P24723 P24723-2 PRKCH Protein kinase C eta type 1 SREDVSNFDPDFIKEEPVLT(1)PIDEGHLPMINQDEFR 91.535 0.0026146999999999998 55390000.0 20269.0 23500.0 22102.0 21076.0 24130.0 26048.0 18759.0 23639.0 28271.0 19468.0 True False 19144.638164750228 22371.024725780866 23526.73028445036 23079.05670326955 26028.893719080726 25885.424769985006 20655.342790197188 23557.001826384072 23137.699053913995 19295.52866587482 0.992180027625185 1.1593890539700644 1.2192840471926871 1.1960831497758393 1.348959863697035 1.3415245168050136 1.070473017239858 1.220852884328891 1.1991223176400583 1.0 14.235978951450766 -4.264226662275776 2.345085414390165 1.2131861446775971 0.9393745039819777 0.2668767193230418 0.10069295587941796 0.7276129280128296 4.815635635049609 0.02628838183721572 0.40646945771396725 5.4421854605623166e-05 4.264226662275776 -0.27381164069561936 SRENLS(ph)AVMLYNPGLEFER ddPTM_KYSE-520_SHP099_60min_R1 3 SRENLSAVMLYNPGLEFER 19 1 A0A1B0GTU3;Q96L93-5;Q96L93-4;Q96L93;Q96L93-6;Q96L93-2 A0A1B0GTU3 KIF16B Kinesin-like protein KIF16B 1 S(0.434)RENLS(0.566)AVMLYNPGLEFER;S(0.46)RENLS(0.54)AVMLYNPGLEFER;S(0.295)RENLS(0.705)AVMLYNPGLEFER 176.53 2.5735000000000003e-09 6054090000.0 858541.0 794497.0 702414.0 676458.0 731314.0 748127.0 690814.0 868930.0 1015491.0 693749.0 True False 810916.0192709473 756328.1715556904 747692.7303421376 740748.3649354856 788864.2511925317 743457.661889379 760648.2208149302 865915.8846397864 831103.4328449 687602.9235885546 1.179337654701684 1.0999490339692903 1.087390272339126 1.0772908891509194 1.1472671568577701 1.0812310948436958 1.1062318014082269 1.2593254841335288 1.2086967700885063 1.0 19.391216153397263 SRENSVCSDTSESS(ph)AAEFDDRR ddPTM_KYSE-520_SHP099_60min_R1 1 SRENSVCSDTSESSAAEFDDRR 22 2 O94763-2;O94763-3;O94763;I3L280;O94763-4 O94763-2 URI1 Unconventional prefoldin RPB5 interactor 1 1 S(0.002)RENS(0.011)VCS(0.013)DT(0.003)S(0.003)ES(0.159)S(0.809)AAEFDDRR 78.794 0.0022329 0.0 28402.0 36911.0 35726.0 22472.0 30154.0 27960.0 23530.0 26422.0 30106.0 24370.0 True False 26826.484442016677 35137.740155459454 38028.955123621075 24607.732123546823 32526.948247209286 27785.49126876462 25908.642030670064 26330.348248941158 24639.50931049964 24154.100759573103 1.1106389225185465 1.4547318695577254 1.5744305905716192 1.0187807183752817 1.3466428980726073 1.1503426082940502 1.0726394780149942 1.090098468621546 1.020096320527857 1.0 14.559980522782967 -6.346554911769378 0.7799826655788433 1.0182767417251761 1.3538880628464658 0.401636017539444 0.1483776583788528 0.6639614440037069 0.8688665191806956 0.10625973825969853 0.09415979800367641 4.502410496511732e-07 6.346554911769378 0.33561132112128966 SREPT(ph)GVEENKTDSLFVLPSR ddPTM_KYSE-520_SHP099_60min_R1 1 SREPTGVEENKTDSLFVLPSR 21 2 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 S(0.076)REPT(0.923)GVEENKTDSLFVLPSR 172.32 6.2925e-09 791470000.0 138830.0 136510.0 102370.0 147630.0 156380.0 120270.0 139210.0 163840.0 167740.0 126240.0 True False 131128.82314925638 129951.85469431261 108968.93399779128 161660.7108134222 168686.21631951258 119519.35031810882 153282.705358673 163271.6772805434 137282.64438129312 125121.61181323389 1.048010981068477 1.0386043850545077 0.8709041740962118 1.2920286789042437 1.3481780954940588 0.9552254689342762 1.22506977921188 1.3049038844245007 1.0971937013264481 1.0 16.932971477073085 -5.264227995374916 24.99982384040024 1.1875490014223427 0.9911163013240524 0.3032514719516104 0.13005911044162521 291.3123156770128 2611611.254868788 0.03624383186922166 0.05656798103320427 5.442168755395841e-06 5.264227995374916 -0.19643270009829028 SREQSSEAAETGVS(ph)ENEENPVR ddPTM_KYSE-520_SHP099_60min_R1 2 SREQSSEAAETGVSENEENPVR 22 1 Q29RF7 Q29RF7 PDS5A Sister chromatid cohesion protein PDS5 homolog A 1 SREQSSEAAET(0.002)GVS(0.998)ENEENPVR;SREQSSEAAETGVS(1)ENEENPVR 195.38 5.7462e-14 504940000.0 135765.0 148031.0 141028.0 132313.0 139064.0 125583.0 110889.0 110543.0 146838.0 116051.0 True False 128233.84480918242 140919.36856093895 150118.89053277814 144887.987738646 150007.54563407542 124799.18991435129 122098.74229234889 110159.55213393026 120175.92068475204 115022.87842631177 1.1148551189434381 1.2251420803315882 1.3051220121303977 1.2596449482132115 1.3041539882013666 1.084994495197776 1.0615170126399698 0.957718617731366 1.0448001504478217 1.0 16.811561320905646 -6.474293403004584 2.974600440972387 1.013479840826627 1.2450225492437743 0.7797125410229704 0.05696461233536036 0.125445671578834 2.2114595057929844 0.023553409959897846 0.019278640717690452 3.355108714184068e-07 6.474293403004584 0.2315427084171473 SRES(ph)ASPTIPNLDLLEAHTK ddPTM_KYSE-520_SHP099_60min_R1 1 SRESASPTIPNLDLLEAHTK 20 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 S(0.074)RES(0.457)AS(0.182)PT(0.287)IPNLDLLEAHTK 193.19 3.1961e-13 558780000.0 307060.0 280850.0 225450.0 269310.0 258840.0 265020.0 155940.0 193130.0 343920.0 301730.0 True False 290026.7696910659 267357.54443555546 239982.86773275438 294905.1414289961 279209.2354018588 263365.9118758227 171703.93702773866 192460.07710688104 281472.79751767195 299056.9069423881 0.9698046189815578 0.8940022391359135 0.802465558098566 0.986117138855476 0.9336324589742618 0.8806548377983422 0.5741513840401506 0.6435567032195567 0.9412014602688857 1.0 18.1900605125452 -6.5465679214926915 24.96934311499556 0.7553636271049823 0.9127469643414812 0.16403702180289081 0.12700773050422987 321.6975099661673 339079.05873335875 0.04781378380752582 0.03703834562685617 2.840743872055058e-07 6.5465679214926915 0.1573833372364989 SRES(ph)FRR ddPTM_KYSE-520_SHP099_60min_R1 2 SRESFRR 7 2 A0A1B0GVJ7 A0A1B0GVJ7 1 SRES(1)FRR;S(0.001)RES(0.999)FRR 61.56 0.029793 1479750000.0 357110.0 381250.0 352270.0 423290.0 347980.0 278700.0 322140.0 352260.0 446300.0 324020.0 True False 337300.3964188645 362934.17773208296 374977.8878519287 463519.35433322086 375364.04626463755 276960.5299214843 354705.0549834274 351038.0922781023 365263.1703074465 321149.4348837451 1.0502911099344328 1.1301099684745322 1.1676118564171514 1.443313622834221 1.168814282362097 0.8624039149305773 1.1044860007673043 1.093067756464142 1.1373620210157631 1.0 18.292885232219906 -6.021337080864498 24.805153300435023 1.045596156733228 1.2052393342105272 0.29826586470746985 0.11727297860783703 948.2851568114949 1102415.4899069828 0.04063715467287154 0.04104564437865611 9.520569311729109e-07 6.021337080864498 0.15964317747729928 SRES(ph)LNVDVVK ddPTM_KYSE-520_SHP099_60min_R1 4 SRESLNVDVVK 11 1 H0YG16;Q07866-4;Q07866-6;Q07866-7;Q07866-9;G3V5R9;G3V3H3;F8W6L3;E7EVH7;G5E9S8;Q07866;G3V2E7;Q07866-8;Q07866-2;Q07866-3;Q07866-5;Q07866-10;H0YJL0;H0YJT3;H0YJU9;H0YGB8 H0YG16 KLC1 Kinesin light chain 1 1 S(0.08)RES(0.92)LNVDVVK;S(0.082)RES(0.918)LNVDVVK;S(0.004)RES(0.996)LNVDVVK;S(0.088)RES(0.912)LNVDVVK 155.57 2.2925e-05 4700360000.0 4657210.0 4154460.0 4154040.0 4124350.0 4292950.0 4533360.0 4443030.0 4682130.0 5402910.0 4712490.0 True False 4398865.277382034 3954873.505628404 4421816.065099003 4516326.9839689545 4630780.741455759 4505065.618675491 4892174.832194132 4665888.783847358 4421877.740277407 4670741.004861738 0.9417917355732827 0.8467336342374384 0.9467054714650993 0.9669401448866347 0.9914445559356889 0.9645291001976354 1.047408714613357 0.9989611453494577 0.946718676046201 1.0 22.155220018452653 -5.145698918641584 2.2450482906223317 0.9915147738760828 0.8945415071188308 0.5432117099932241 0.03383841590553229 0.2184169617694619 2.1423788734509124 0.00975863495576699 0.020784850014219734 7.149918334300855e-06 5.145698918641584 -0.09697326675725193 SRES(ph)MIQLF ddPTM_KYSE-520_SHP099_60min_R1 2 SRESMIQLF 9 1 G3V5D8;G3V232;P30520;Q8N142;Q8N142-2 G3V5D8 ADSSL1;ADSS Adenylosuccinate synthetase isozyme 2;Adenylosuccinate synthetase isozyme 1 1 S(0.104)RES(0.896)MIQLF;S(0.253)RES(0.747)MIQLF 80.834 0.015727 306620000.0 433010.0 400520.0 398040.0 390280.0 375210.0 381980.0 360420.0 409590.0 459600.0 478450.0 True False 408990.0721159649 381278.4180072235 423698.29528651736 427372.0938580388 404736.89234713087 379595.9211317137 396854.77096022543 408169.22788902425 376148.22557316255 474211.30522846774 0.8624637742850094 0.8040264198752693 0.8934799542208004 0.9012271304922548 0.8534948194711107 0.8004784300720756 0.8368732811399907 0.8607328070602926 0.7932080518239439 1.0 18.855170531610653 -10.197930337948481 5.153544734932877 1.0000113152664076 0.8461254955191911 0.632222851091351 0.03543317773904103 4.791015967675496e-06 7.456706423454897e-07 0.03568149116059107 0.008653396661825775 6.339713938891907e-11 10.197930337948481 -0.1538858197472165 SRESAS(ph)PTIPNLDLLEAHTK ddPTM_KYSE-520_SHP099_60min_R1 2 SRESASPTIPNLDLLEAHTK 20 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 S(0.226)RES(0.226)AS(0.473)PT(0.075)IPNLDLLEAHTK;S(0.234)RES(0.234)AS(0.53)PT(0.002)IPNLDLLEAHTK 295.99 2.8954999999999995e-44 1243200000.0 933520.0 893150.0 787060.0 701700.0 735230.0 736430.0 606910.0 683990.0 1089810.0 749810.0 True False 881735.7846740176 850241.7333545185 837795.1469405256 768389.3570262027 793088.4181135407 731833.6672051616 668262.3856708024 681617.3983344667 891927.9758744303 743167.2667433535 1.1864567024566188 1.1440785559358366 1.127330527637261 1.0339386453245922 1.0671735066978227 0.9847495980442506 0.8992085840906409 0.9171789835704074 1.2001712343749527 1.0 19.503327433171602 -5.244650915045201 1.0784059357997462 0.9938924096797755 1.182972725410865 0.40533604851188665 0.07838757863603431 0.5931803592636381 1.2870535611561957 0.02999512878732818 0.08760147580178075 5.693103574002382e-06 5.244650915045201 0.18908031573108952 SRESASPT(ph)IPNLDLLEAHTK ddPTM_KYSE-520_SHP099_60min_R1 1 SRESASPTIPNLDLLEAHTK 20 1 O75151 O75151 PHF2 Lysine-specific demethylase PHF2 1 S(0.111)RES(0.111)AS(0.259)PT(0.52)IPNLDLLEAHTK 272.96 2.3732999999999998e-35 1121200000.0 468320.0 523340.0 447450.0 370820.0 444610.0 417020.0 358110.0 362560.0 592320.0 420950.0 True False 442341.35602722486 498197.9608506446 476293.3429453134 406062.6213089012 479598.27751514653 414417.22349428566 394311.2536167978 361302.36398214026 484769.6191720962 417220.71049414435 1.0602094884104107 1.1940873219370944 1.1415860501776267 0.9732561473949175 1.1495073601382921 0.9932805660664872 0.9450903171843669 0.8659741831948466 1.1619020987667388 1.0 18.670451248271483 -5.857046593604016 1.0320969935118018 0.9833635908161366 1.1301444760972392 0.23719208727152685 0.0908209345227079 0.6897289541812652 1.579403608420627 0.042523284690340245 0.0586264552603444 1.3898035171185287e-06 5.857046593604016 0.14678088528110267 SRFS(ph)GGFGAR ddPTM_KYSE-520_SHP099_60min_R1 3 SRFSGGFGAR 10 1 A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5;A0A0J9YVQ7 A0A2R8Y5G6 1 S(0.017)RFS(0.983)GGFGAR;SRFS(1)GGFGAR;S(0.001)RFS(0.999)GGFGAR 148.08 0.00011442 3879950000.0 736060.0 730900.0 752650.0 696530.0 714560.0 666100.0 624790.0 645130.0 854810.0 771410.0 True False 695229.2845007669 695786.466896733 801167.0232825784 762728.0017806189 770791.8067097523 661942.6228227504 687949.8705627864 642892.1946044737 699598.0520065159 764575.9075478981 0.909300538556681 0.9100292855528466 1.0478580548686567 0.9975830970489173 1.0081298653285968 0.8657644274270856 0.8997796867143484 0.8408480940320482 0.9150145134055097 1.0 19.544300214749587 -6.262917424555289 24.99783501717081 0.8940529956424307 0.9763429428629312 0.27729509107721506 0.05549423792675873 160.42778488030928 2713258.5838242504 0.019434967878892342 0.01805864265036163 5.458616397129414e-07 6.262917424555289 0.08228994722050054 SRFT(ph)PELQPK ddPTM_KYSE-520_SHP099_60min_R1 3 SRFTPELQPK 10 1 Q14676;Q14676-3;Q14676-2;Q14676-4 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 S(0.429)RFT(0.571)PELQPK;S(0.366)RFT(0.634)PELQPK;S(0.358)RFT(0.642)PELQPK 109.84 0.0018715 1898440000.0 2886860.0 2897520.0 2365540.0 2007490.0 2138060.0 2509650.0 2147480.0 2559490.0 2970330.0 2543160.0 True False 2726720.1209872677 2758318.7899338137 2518026.493397824 2198281.246026124 2306313.158102681 2493986.3434426007 2364568.2357850955 2550611.726579455 2430992.947925872 2520629.580948541 1.0817615335455886 1.0942975559684687 0.9989672867562963 0.8721159438265761 0.91497504255853 0.9894299274644257 0.9380863628900531 1.0118947051393532 0.9644387919192245 1.0 21.265352691886687 -4.884507695207262 4.146259374030352 0.9540637635503721 1.0876875245236841 0.6337401203887992 0.039554073681321765 0.1346508570465354 4.130907326320191 0.011111647953512717 0.025195369778722235 1.3046448516031857e-05 4.884507695207262 0.13362376097331197 SRGEEQGCQGDGDAGVKAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 SRGEEQGCQGDGDAGVKASPR 21 2 Q13671;Q13671-2;E9PNR2 Q13671 RIN1 Ras and Rab interactor 1 1 SRGEEQGCQGDGDAGVKAS(1)PR;SRGEEQGCQGDGDAGVKAS(1)PR;SRGEEQGCQGDGDAGVKAS(1)PR 217.68 2.9809000000000004e-19 85211000.0 157906.0 148113.0 144355.0 136849.0 145012.0 148228.0 132033.8 126886.0 179635.0 155761.0 True False 149146.6394021931 140997.42915785435 153660.35427616633 149855.08781484785 156423.61939458488 147302.8540696151 145381.06502971041 126445.86208141498 147017.81222984122 154381.07872022432 0.9660940358661615 0.913307707956722 0.9953315234610834 0.9706829946849985 1.0132305117394738 0.9541509574276478 0.9417026117117364 0.819050256220617 0.9523046052571824 1.0 17.236136418045007 -6.890970894976987 3.815990756615632 0.9091372040444361 0.9696365902224965 0.11920014552069835 0.04944666297170268 0.3360661932024484 9.202972485558728 0.02143396445094785 0.013936995661440485 1.2853727986188574e-07 6.890970894976987 0.06049938617806039 SRGPKS(ph)DDDGFEIVPIEDPAK ddPTM_KYSE-520_SHP099_60min_R1 4 SRGPKSDDDGFEIVPIEDPAK 21 2 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 S(0.42)RGPKS(0.58)DDDGFEIVPIEDPAK;S(0.064)RGPKS(0.936)DDDGFEIVPIEDPAK;S(0.132)RGPKS(0.868)DDDGFEIVPIEDPAK;S(0.042)RGPKS(0.958)DDDGFEIVPIEDPAK 192.55 2.2965e-13 4554440000.0 3030870.0 2571390.0 2725540.0 2465640.0 2490120.0 2358810.0 2339360.0 2676160.0 3241430.0 2406250.0 True False 2862741.5992104495 2447856.5646649203 2901232.6694181887 2699973.6842783047 2686078.277155293 2344087.791833855 2575845.338753437 2666877.025580437 2652868.0218007294 2384932.497034173 1.200344916583788 1.0263840036181309 1.2164841868799516 1.1320964797267457 1.1262701483147282 0.9828738527186363 1.0800495787434978 1.1182190812095862 1.1123451188240139 1.0 21.18551700219134 -6.027613531426959 24.213535254766736 1.0659930751931996 1.1391977452019582 0.2988431512141554 0.062311381753512425 712.2293425050539 624532.221402639 0.020240371864174437 0.020295279279718016 9.383966929099036e-07 6.027613531426959 0.07320467000875852 SRGS(ph)PRYS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SRGSPRYSPR 10 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 S(0.421)RGS(0.594)PRY(0.321)S(0.664)PR 50.088 0.061528 2196400000.0 571830.0 851380.0 1348000.0 348300.0 484010.0 650000.0 319910.0 273230.0 795010.0 614260.0 True False 540109.4499851565 810478.4268525664 1434894.2368762589 381402.3272797866 522098.8333598124 645943.108894742 352249.6248207247 272282.2289023616 650656.2245711928 608818.1342870481 0.8871441561405651 1.3312324012846153 2.356851999089319 0.6264634803075058 0.8575612386631885 1.06097875952918 0.5785793901050992 0.4472308125664089 1.0687201775504582 1.0 19.215651806104084 -5.329318577317382 24.99999693873761 0.7859558437804 1.5057147613932889 0.41492254812517837 0.3907972081364479 166.75788107391529 61416.602065732906 0.11129041587681034 0.16507038501482607 4.684696095437552e-06 5.329318577317382 0.7197589176128889 SRGS(ph)TNLFSK ddPTM_KYSE-520_SHP099_60min_R1 3 SRGSTNLFSK 10 1 P27448-8;P27448-3;P27448-2;J3KNR0;P27448-6;P27448-4;P27448;H0YIY6;P27448-7;A2SY06 P27448-8 MARK3 MAP/microtubule affinity-regulating kinase 3 1 S(0.042)RGS(0.899)T(0.059)NLFSK;SRGS(0.549)T(0.45)NLFS(0.001)K;S(0.004)RGS(0.949)T(0.046)NLFSK 113.8 0.00097387 1222090000.0 1886040.0 1950060.0 1797640.0 1801510.0 1823120.0 1582550.0 1680200.0 1973650.0 2052160.0 2022560.0 True False 1781417.6014724742 1856376.1905002652 1913518.7507256963 1972724.9687562673 1966589.1718661604 1572672.7184328823 1850051.0131717755 1966803.8688033735 1679539.4747437348 2004641.6919278684 0.8886463893501491 0.9260389016029015 0.9545440257133738 0.98407858955537 0.9810177947436018 0.7845156193077275 0.9228836358245035 0.9811248946498233 0.8378252739663007 1.0 20.9349129628753 SRIPS(ph)PLQPEMQGTPDDEPSEPEPSPSTLIYR ddPTM_KYSE-520_SHP099_60min_R1 2 SRIPSPLQPEMQGTPDDEPSEPEPSPSTLIYR 32 1 Q96GY3;K7EMY4 Q96GY3 LIN37 Protein lin-37 homolog 1 SRIPS(0.999)PLQPEMQGT(0.001)PDDEPSEPEPSPSTLIYR;S(0.088)RIPS(0.879)PLQPEMQGT(0.033)PDDEPSEPEPSPSTLIYR 162.07 3.7521e-10 276310000.0 175832.0 206168.0 161509.0 136802.0 132703.0 187854.0 139607.0 172116.0 215147.0 180993.0 True False 166078.2484475982 196263.37981552296 171920.1285635369 149803.62094897893 143145.9711232145 186681.53350509692 153719.8379930198 171518.96976817647 176081.72821451092 179389.54283042334 0.9257967093689051 1.0940625452234438 0.9583620419059362 0.8350744340242178 0.7979616251016937 1.0406489172089963 0.8569052329785518 0.9561257978694616 0.9815607166185863 1.0 17.452736268002788 -4.994713350013804 24.96398656686511 0.9173041599357633 1.0140003182275357 0.14555695737264063 0.0815664093780426 229.05637571182655 1081592.6302161834 0.021129395590019456 0.04375771583677567 1.0122473534960385e-05 4.994713350013804 0.09669615829177236 SRKS(ph)PS(ph)PAGGGS(ph)SPYSR ddPTM_KYSE-520_SHP099_60min_R1 2 SRKSPSPAGGGSSPYSR 17 2 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 3 S(0.243)RKS(0.727)PS(0.635)PAGGGS(0.592)S(0.45)PY(0.113)S(0.24)R;S(0.483)RKS(0.518)PS(0.918)PAGGGS(0.552)S(0.519)PY(0.001)S(0.008)R 50.215 0.049431 2578160000.0 1471620.0 1470600.0 1375670.0 1321590.0 1322730.0 1308880.0 1197440.0 1387240.0 1902950.0 1302430.0 True False 1389986.3049982605 1399950.1685843973 1464347.8893498257 1447193.5162494783 1426821.3256958004 1300710.7944156146 1318488.92108821 1382427.9882242505 1557422.2494657282 1290891.4834752055 1.0767646411736191 1.0844832323284024 1.1343694710942385 1.1210806909605544 1.1052992013353893 1.0076066122258198 1.0213785883370379 1.0709095271917202 1.2064703109458867 1.0 20.29993629744232 -6.072303892706958 24.99993943573961 1.062460437390913 1.1059588213026386 0.1272641941295123 0.05635382381876511 340.6564385108392 117784.98065016774 0.019214866225728582 0.019214873933479298 8.466347835996491e-07 6.072303892706958 0.04349838391172556 SRKS(ph)PS(ph)PAGGGSS(ph)PYSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRKSPSPAGGGSSPYSR 17 2 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 3 S(0.483)RKS(0.531)PS(0.759)PAGGGS(0.578)S(0.617)PY(0.006)S(0.025)R 47.728 0.057346 736210000.0 575600.0 580400.0 553690.0 472600.0 533870.0 556010.0 443730.0 521990.0 746470.0 477370.0 True False 543670.3205698477 552516.7128018383 589381.7433353232 517515.7619076287 575882.5316952191 552539.7353485627 488586.5587874728 520179.3385233819 610929.864977369 473140.87318823993 1.1490664860686164 1.1677636494998362 1.2456791977488628 1.0937878996172332 1.217148135638037 1.1678123084680825 1.0326450037916883 1.0994174631715397 1.291221916340991 1.0 18.85191027066769 -6.556994764651888 24.998073952714353 1.1121233812184446 1.175626430324217 0.1430005391905682 0.08076040616351658 402.51078188136637 294931.3895684025 0.030157948093032457 0.023360289273847874 2.7733535367682803e-07 6.556994764651888 0.06350304910577242 SRLDQELK ddPTM_KYSE-520_SHP099_60min_R1 1 SRLDQELK 8 1 P46781;B5MCT8;C9JM19;F2Z3C0;A8MXK4 P46781 RPS9 40S ribosomal protein S9 0 77.355 0.015676 1000800000.0 970950.0 880660.0 668930.0 529450.0 876600.0 888030.0 645070.0 740540.0 695460.0 707890.0 False True 917089.4679591625 838351.7717023899 712050.2981258427 579768.7688150537 945583.4328282711 882487.475371998 710279.9708765117 737971.2395833349 569181.9951199119 701618.6453300868 1.3071053257538563 1.1948824012622627 1.0148679811535626 0.8263303329721133 1.3477170812406325 1.2577879468365878 1.012344776758819 1.051812468917706 0.8112412617713883 1.0 19.420327561968353 -7.277335399712139 2.0688846975363155 0.9218034150481909 1.1429507308573945 0.26396578210422583 0.15361189302807096 0.5225797153685311 4.189204877009131 0.11739889258906412 0.047569609145644544 5.280372982548004e-08 7.277335399712139 0.22114731580920366 SRLEEEKR ddPTM_KYSE-520_SHP099_60min_R1 1 SRLEEEKR 8 2 Q9Y6D9;Q9Y6D9-3 Q9Y6D9 MAD1L1 Mitotic spindle assembly checkpoint protein MAD1 0 73.985 0.012119 467470000.0 349210.0 316790.0 250860.0 219220.0 344650.0 337490.0 247720.0 294250.0 328200.0 249030.0 False True 329838.62516712386 301570.93288851605 267030.8369901917 240054.60288910347 371771.9942097462 335383.59972444054 272761.9551142197 293229.31542846636 268607.1532487207 246823.7879424085 1.3363324010086306 1.2218065989607199 1.0818683207815372 0.9725748271277463 1.5062243283313193 1.3587977176766113 1.1050877931500807 1.1880107580914596 1.0882547241005591 1.0 17.913121917111894 -7.829391464389182 1.3008321838022248 1.002913856040368 1.2281222087029329 0.21713208534472617 0.14359356289707 0.7342065840941805 2.6480781809752147 0.14590734825991833 0.045751801057491034 1.4811823749767792e-08 7.829391464389182 0.22520835266256478 SRLNS(ph)HGGR ddPTM_KYSE-520_SHP099_60min_R1 3 SRLNSHGGR 9 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;B1AN86;A0A3B3IU26 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(0.001)RLNS(0.999)HGGR;S(0.002)RLNS(0.998)HGGR;S(0.022)RLNS(0.978)HGGR 84.169 0.0038991 529550000.0 220204.0 346790.0 260308.0 299918.0 269964.0 286582.0 249913.0 297440.0 446800.0 320910.0 True False 207988.8451542087 330129.6878575973 277087.8701875263 328422.1165463655 291208.6309149567 284793.33543580456 275176.6449558371 296408.25006301777 365672.3829114208 318066.98706420185 0.6539152241921484 1.0379250324113662 0.8711619924629149 1.032556442206539 0.9155575484360978 0.8953879120385386 0.8651531160016072 0.9319051084141208 1.1496709743020572 1.0 18.278971113304596 -4.251815587849305 24.87911622661459 0.9565523905432742 0.6539150515722577 0.5431196237519094 0.0855892050764072 986.0754885576581 2549116.8278860752 0.02098502818529325 0.2648249004328473 5.5999533885245465e-05 4.251815587849305 -0.3026373389710165 SRLS(ph)AIEIDIPVVSHTT ddPTM_KYSE-520_SHP099_60min_R1 2 SRLSAIEIDIPVVSHTT 17 1 P56749 P56749 CLDN12 Claudin-12 1 SRLS(1)AIEIDIPVVSHTT;S(0.233)RLS(0.767)AIEIDIPVVSHTT 281.96 1.4065999999999999e-37 964121000.0 274935.0 459950.0 296871.0 472267.0 343753.0 376082.0 319695.0 413415.0 572004.0 331172.0 True False 259683.8074806653 437853.3116009752 316007.7796703948 517151.1136877492 370804.40541297797 373734.73273746506 352012.8905225272 411980.9598567863 468142.4926474133 328238.07372791716 0.7911446851102416 1.3339504056556226 0.962739563029302 1.5755366457470308 1.1296812743312188 1.1386087192531509 1.0724316241701974 1.2551284961484548 1.4262284912001573 1.0 18.324383067318358 -4.251000454361506 24.53258257063977 1.2130325603175103 0.7911443791921385 0.3217122774847566 0.18263059884335286 1362.1718798059003 3201168.761602645 0.04347164905403805 0.5896152288206896 5.610473890610015e-05 4.251000454361506 -0.42188818112537174 SRLS(ph)LRR ddPTM_KYSE-520_SHP099_60min_R1 1 SRLSLRR 7 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.01)RLS(0.99)LRR 57.266999999999996 0.039601 8817800000.0 3131100.0 2673200.0 1471300.0 3779100.0 1763600.0 2819900.0 1935100.0 3434400.0 1876200.0 1229200.0 True False 2957411.641306897 2544775.459444993 1566142.3521632322 4138264.5277721547 1902385.286488636 2802299.958111208 2130718.7927560415 3422486.867994985 1535529.375153105 1218310.2443031291 2.427470059564779 2.0887745722770306 1.2855037208187166 3.3967247235446445 1.5614949438242607 2.3001529956879887 1.748913138274404 2.8092079862241004 1.2603763141066129 1.0 20.21645013353995 -7.914722038449246 6.718853173959271 1.005275732634349 2.1724364450427953 0.35827205126854644 0.5775424097752107 0.20271250639700733 12.076047031044583 0.5205589150430765 0.13491206677962328 1.2169646454736783e-08 7.914722038449246 1.1671607124084462 SRLS(ph)SSSSNDSGNK ddPTM_KYSE-520_SHP099_60min_R1 1 SRLSSSSSNDSGNK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 SRLS(0.972)S(0.02)S(0.004)S(0.002)S(0.002)NDSGNK 109.35 0.00030861 355470000.0 412180.0 433240.0 422810.0 403650.0 425020.0 441010.0 419180.0 418770.0 494320.0 386340.0 True False 389315.553739541 412426.50009350193 450065.0091199188 442012.7746382028 458466.6559669989 438257.4930056466 461554.80520256166 417317.3846116528 404563.94879313686 382917.3281679713 1.0167091565225876 1.0770640808205632 1.1753581674488556 1.1543295174260397 1.197299318264038 1.144522487667102 1.2053641119111098 1.089836771316318 1.056530794071743 1.0 18.546673422418944 -7.794897697710968 2.1844409778034684 1.0060850391327845 1.1406820556881938 0.40427091217672473 0.05417632266952429 0.3048329339053595 2.8278362079451758 0.05452549078592066 0.015568404758234261 1.6036230952187508e-08 7.794897697710968 0.13459701655540934 SRLT(ph)IS(ph)KDTSK ddPTM_KYSE-520_SHP099_60min_R1 1 SRLTISKDTSK 11 2 A0A0B4J1V2 A0A0B4J1V2 IGHV2-26 2 S(0.582)RLT(0.755)IS(0.653)KDT(0.01)SK 76.262 0.062091999999999994 290190000.0 307600.0 364070.0 182690.0 241500.0 468020.0 500120.0 386690.0 433940.0 411170.0 415540.0 True False 290536.81481460243 346579.5307197892 194466.48971433507 264452.0873903775 504850.511330466 496998.5655699058 425780.3989307186 432434.7634223573 336511.8927522134 411858.6388852281 0.7054284829401523 0.8415011802541549 0.4721680483398254 0.6420943071782255 1.2257858975519798 1.2067212355072234 1.0338022776046956 1.0499591913206492 0.8170567786632942 1.0 18.65178972452903 -5.748827355155512 24.995074590520662 1.06452293841321 0.6640888320602006 0.6657297193100461 0.13538324539158852 143.1994001020716 283797.69873596606 0.04243214156536121 0.05440094612623812 1.783087456343849e-06 5.748827355155512 -0.40043410635300936 SRLT(ph)PVS(ph)PESSSTEEK ddPTM_KYSE-520_SHP099_60min_R1 4 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501;Q13501-2 E7EMC7 SQSTM1 Sequestosome-1 2 SRLT(1)PVS(0.925)PES(0.073)S(0.001)STEEK;S(0.002)RLT(0.998)PVS(0.999)PES(0.001)SSTEEK;S(0.017)RLT(0.983)PVS(0.989)PES(0.009)S(0.002)S(0.001)TEEK;S(0.002)RLT(0.961)PVS(0.89)PES(0.027)S(0.02)S(0.042)T(0.059)EEK 281.53 6.8892e-37 3377920000.0 6795130.0 6112900.0 5927250.0 6197570.0 6397030.0 5944760.0 6595010.0 6536370.0 7752530.0 6568760.0 True False 6418190.593144174 5819227.108350036 6309330.018935313 6786585.1894326415 6900439.866878198 5907656.547743245 7261697.971895007 6513696.85807022 6344865.977377525 6510565.8968179505 0.9858114785814662 0.8938127960880009 0.9690908776484405 1.0423955915644132 1.059883269171855 0.9073952466452451 1.1153712422209219 1.0004809046251724 0.9745490757537049 1.0 22.63435151687031 -5.033306736037681 6.220895249897016 1.015464929871615 0.9375701626960778 0.2329444194472654 0.055452230127077354 0.23815465171560807 29.13964097194691 0.014564633317860924 0.026680170892613077 9.261754477255967e-06 5.033306736037681 -0.07789476717553712 SRLT(ph)PVSPES(ph)SSTEEK ddPTM_KYSE-520_SHP099_60min_R1 4 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501;Q13501-2 E7EMC7 SQSTM1 Sequestosome-1 2 S(0.003)RLT(0.997)PVS(0.025)PES(0.848)S(0.122)S(0.005)T(0.001)EEK;SRLT(1)PVS(0.018)PES(0.981)S(0.001)STEEK;S(0.001)RLT(0.999)PVS(0.033)PES(0.804)S(0.137)S(0.024)T(0.004)EEK;S(0.007)RLT(0.993)PVS(0.104)PES(0.606)S(0.242)S(0.042)T(0.007)EEK 308.39 9.178299999999998e-47 1927080000.0 2874660.0 2750750.0 2579330.0 2828560.0 2753650.0 2689150.0 2867630.0 2993110.0 3353370.0 2925720.0 True False 2715196.87930736 2618599.8410400716 2745597.7388739176 3097385.491962427 2970346.588874706 2672366.0173604568 3157518.025771797 2982727.6000071224 2744482.5395784928 2899800.396975717 0.9363392329137946 0.9030276165804663 0.9468230095207167 1.0681374811841453 1.0243279475278932 0.921568953555404 1.088874264954533 1.028597555582754 0.9464384315695626 1.0 21.46752216742511 -5.057725201819537 6.906707633795663 1.0122780758158634 0.9207648090732133 0.3938267266651889 0.04761997971484199 0.22985974798908754 23.262786990368667 0.012978206281716463 0.022950713851644818 8.755375930755402e-06 5.057725201819537 -0.09151326674265003 SRLT(ph)PVSPESSSTEEK ddPTM_KYSE-520_SHP099_60min_R1 7 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501;Q13501-2 E7EMC7 SQSTM1 Sequestosome-1 1 SRLT(1)PVSPESSSTEEK;SRLT(0.992)PVS(0.005)PES(0.003)SSTEEK;S(0.003)RLT(0.996)PVS(0.001)PESSSTEEK;SRLT(0.892)PVS(0.073)PES(0.02)S(0.007)S(0.007)T(0.001)EEK;S(0.413)RLT(0.584)PVS(0.003)PESSSTEEK;S(0.031)RLT(0.968)PVS(0.001)PESSSTEEK;S(0.249)RLT(0.751)PVSPESSSTEEK 288.92 7.629899999999999e-37 12436080000.0 8890560.0 10442780.0 7616060.0 6592500.0 6588490.0 8889750.0 7080540.0 7986520.0 10126510.0 9284850.0 True False 8397382.913908029 9941093.173867645 8107003.413726863 7219049.217892608 7106966.679619816 8834265.772764679 7796310.082611161 7958816.62618779 8287791.052543274 9202593.452503996 0.9125017808564746 1.0802490868661274 0.8809476867111818 0.784458126413085 0.7722786751691213 0.9599756653773404 0.8471861897245727 0.8648449665047653 0.9005929790681119 1.0 23.133609064602297 -4.884577175523191 8.038042530188735 0.8654003391147489 0.995574555441867 0.27818491566022663 0.07612947028374864 0.2544337786868908 16.750233481106942 0.019423150117873367 0.040741044321874496 1.3044361455533343e-05 4.884577175523191 0.13017421632711812 SRLTPVS(ph)PESSSTEEK ddPTM_KYSE-520_SHP099_60min_R1 4 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501;Q13501-2 E7EMC7 SQSTM1 Sequestosome-1 1 S(0.001)RLT(0.321)PVS(0.47)PES(0.145)S(0.045)S(0.014)T(0.004)EEK;SRLT(0.003)PVS(0.413)PES(0.118)S(0.397)S(0.034)T(0.034)EEK;S(0.026)RLT(0.01)PVS(0.964)PESSSTEEK;S(0.093)RLT(0.093)PVS(0.779)PES(0.005)S(0.017)S(0.009)T(0.005)EEK 295.03 2.3706999999999997e-37 3586340000.0 2941610.0 3232060.0 2600540.0 2110840.0 2264170.0 2881420.0 2360500.0 2785240.0 3439490.0 2954630.0 True False 2778433.029345846 3076786.9861790356 2768174.969411114 2311453.5989528107 2442347.297634937 2863435.988971524 2599122.376259953 2775578.6525199 2814965.3184870267 2928454.2768673575 0.9487711832462027 1.0506522196653019 0.9452682909470937 0.7893084133877726 0.8340056107167834 0.9777977452441616 0.8875407059591521 0.9477964789974482 0.961246122476007 1.0 21.481707938570416 -9.592409591919232 14.009054674409958 0.9999979876568668 0.9252802875540437 0.0881162781940873 0.07033616463910672 0.0 0.0 0.07459920940946657 0.01809296588134127 2.556173970293381e-10 9.592409591919232 -0.07471770010282308 SRLTPVSPES(ph)SSTEEK ddPTM_KYSE-520_SHP099_60min_R1 1 SRLTPVSPESSSTEEK 16 1 E7EMC7;Q13501;Q13501-2 E7EMC7 SQSTM1 Sequestosome-1 1 SRLT(0.015)PVS(0.142)PES(0.441)S(0.358)S(0.039)T(0.005)EEK 242.9 5.708699999999999e-23 1478400000.0 1283400.0 1505500.0 1139900.0 1084300.0 889410.0 1307400.0 1043300.0 1236900.0 1485200.0 1394800.0 True False 1212207.2436055278 1433173.5201984285 1213379.7779044854 1187351.5459933167 959401.5069493398 1299240.031644595 1148766.9456267783 1232609.4825946297 1215525.1188452137 1382443.157137978 0.8768586522682905 1.036696165624253 0.8777068132164665 0.8588791082386691 0.6939898410980991 0.9398144328294588 0.8309686656520685 0.8916167556186951 0.8792586607044817 1.0 20.39878873072369 -4.967676158369287 20.59781429851861 0.8606368265835201 0.9568846892230781 0.13816537155117703 0.08272016801820894 45.496885418764755 28988.493096680853 0.02079710835195126 0.04328998134429302 1.0772682039265195e-05 4.967676158369287 0.09624786263955798 SRNEVVT(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 2 SRNEVVTPEK 10 1 A0A494C142;Q99728-3;Q99728-2;Q99728;A0A087X2H0 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 S(0.01)RNEVVT(0.99)PEK;SRNEVVT(1)PEK 119.39 0.00099573 0.0 1270750.0 1113920.0 1013010.0 863300.0 1002110.0 1161960.0 953790.0 1080930.0 1243610.0 1075610.0 True False 1200258.9643226778 1060405.611171991 1078310.2454733066 945347.7724393909 1080970.3557740564 1154707.776632824 1050208.4012933627 1077180.5061209581 1017801.7728569214 1066080.9322119178 1.1258610186680347 0.9946764632323444 1.0114712803614405 0.8867504744484752 1.0139665039606758 1.0831333173148703 0.985111326505369 1.010411567802841 0.9547134200638724 1.0 20.02388553469021 -4.261301708668949 8.505797889035822 0.9940614145971693 1.1266508906785235 0.41706224307864403 0.04698909166935658 0.09139826800197215 103.74980614502368 0.012127546674580249 0.06928732241461283 5.478962037689825e-05 4.261301708668949 0.13258947608135419 SRNS(ph)PLLER ddPTM_KYSE-520_SHP099_60min_R1 6 SRNSPLLER 9 1 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 SRNS(1)PLLER;SRNS(1)PLLER;S(0.002)RNS(0.998)PLLER;S(0.003)RNS(0.997)PLLER;S(0.021)RNS(0.979)PLLER;S(0.037)RNS(0.963)PLLER 113.34 0.00058159 17016040000.0 4991863.0 4679657.0 4241837.0 4225980.0 4468320.0 4034913.0 4013185.0 4329364.0 4936787.0 4417113.0 True False 4714954.408357816 4454839.2534116395 4515272.600199165 4627615.868612777 4819951.362736953 4009729.6112920144 4418876.904711205 4314346.446765152 4040390.9270727932 4377980.815281914 1.076970093587357 1.0175556818023144 1.0313596131892622 1.0570205909672972 1.1009530571518915 0.9158856058243859 1.0093413130744058 0.9854649046668643 0.9228891348653885 1.0 22.061834201833374 -6.259457148720959 24.999006082517187 0.9684718187589446 1.0531951657317955 0.6195077800313284 0.035219119808554966 129.11752061511135 1628383.6843431934 0.01191828443249186 0.011357575698051414 5.502282081434141e-07 6.259457148720959 0.08472334697285089 SRPALS(ph)PLGDIDFCPPNPGPDGPR ddPTM_KYSE-520_SHP099_60min_R1 5 SRPALSPLGDIDFCPPNPGPDGPR 24 1 Q9ULL5;Q9ULL5-2;A0A3Q5ADB5 Q9ULL5 PRR12 Proline-rich protein 12 1 S(0.053)RPALS(0.947)PLGDIDFCPPNPGPDGPR;S(0.06)RPALS(0.94)PLGDIDFCPPNPGPDGPR;S(0.233)RPALS(0.767)PLGDIDFCPPNPGPDGPR;S(0.274)RPALS(0.726)PLGDIDFCPPNPGPDGPR;S(0.122)RPALS(0.878)PLGDIDFCPPNPGPDGPR 150.07 1.3027e-09 3145680000.0 939653.0 882127.0 780480.0 718908.0 774548.0 897569.0 877685.0 1040697.0 1194589.0 1013548.0 True False 887528.5749381843 839748.2948203788 830790.9896121531 787232.8001724283 835500.5210247219 891966.9389346845 966409.9651801386 1037087.0650075047 977681.750738074 1004568.7532484111 0.8834921174566088 0.8359291408427121 0.8270125732317238 0.7836524853344311 0.8317006858147002 0.8879102958860574 0.9620147571334656 1.0323704193007608 0.9732352788961489 1.0 19.93814487563146 -6.694101193263265 2.1017773785620935 1.0024042539503486 0.8298784260653668 0.889436997261415 0.026756971234117476 0.09901849508975753 0.8949229178620784 0.013387326535883284 0.00909007293373987 2.0225478577826782e-07 6.694101193263265 -0.17252582788498183 SRPEFMLPVHFYGK ddPTM_KYSE-520_SHP099_60min_R1 2 SRPEFMLPVHFYGK 14 1 E9PK47;P06737-2;P06737 E9PK47 PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form 0 ; 110.77 0.00016732 681180000.0 2083400.0 2103200.0 1457260.0 1679710.0 2667800.0 2262500.0 1718490.0 1448160.0 1503840.0 1234140.0 False True 1967829.6488450656 2002159.1150324398 1551197.3112984407 1839349.1333767741 2877740.6822943827 2248378.8982682363 1892211.7400461626 1443136.6709630846 1230780.564721377 1223206.4797463922 1.6087469134835326 1.6368120576401362 1.2681402011703298 1.503711077264835 2.3526205345895694 1.8381025080364137 1.5469274986496764 1.1797980920296387 1.006191992194609 1.0 20.222236523608736 -7.282031034391469 2.543059965113064 1.0200048367309467 1.6986984192489132 0.5481155621115501 0.2624102218084013 0.2604092730532864 3.2595202462774395 0.19414477088440854 0.08329151092901813 5.2235886025269873e-08 7.282031034391469 0.6786935825179665 SRPFTVAASFQSTSVKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 SRPFTVAASFQSTSVKSPK 19 2 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 SRPFT(0.001)VAAS(0.002)FQS(0.01)T(0.047)S(0.304)VKS(0.636)PK;SRPFTVAASFQSTSVKS(1)PK;SRPFTVAASFQSTS(0.001)VKS(0.999)PK 201.16 1.9564e-13 5031400000.0 2438640.0 2696390.0 3151610.0 2290440.0 2872440.0 3354060.0 3100320.0 3312350.0 4324100.0 2828270.0 True False 2303363.777891682 2566851.3770360993 3354767.82335429 2508122.728954106 3098484.6860520625 3333126.067414618 3413730.60180735 3300860.2309582983 3538952.4416904063 2803213.728160761 0.8216868213623371 0.9156816518304713 1.1967577747114608 0.8947311807721956 1.105333016503538 1.1890374372565384 1.2177917678960428 1.1775271353012573 1.2624625821921815 1.0 21.418650314694446 -5.955927581736927 4.5839409880986235 1.1808316332656899 0.9718434402575721 0.4450292282787842 0.1110892110718431 0.19500631153300618 9.130679620010609 0.03562040489502004 0.039921488519371835 1.1068083280086036e-06 5.955927581736927 -0.20898819300811777 SRPT(ph)SEGS(ph)DIESTEPQK ddPTM_KYSE-520_SHP099_60min_R1 2 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 2 S(0.119)RPT(0.53)S(0.352)EGS(0.727)DIES(0.272)T(0.001)EPQK;SRPT(0.847)S(0.152)EGS(0.994)DIES(0.005)TEPQK 248.35 2.4033000000000003e-23 587700000.0 2381880.0 2068470.0 2050760.0 2059550.0 2042770.0 2074240.0 2037950.0 2143880.0 2632570.0 1942300.0 True False 2249752.368239936 1969097.5963632325 2182955.270932015 2255289.0127737154 2203524.377228619 2061293.8987597392 2243965.8744753087 2136443.380665354 2154561.6496891635 1925092.733086534 1.1686462317235333 1.0228585680681184 1.1339481124278339 1.1715222721545326 1.1446328477359482 1.070750444034367 1.1656404057364653 1.109787255411825 1.1191988898294358 1.0 20.8764965124521 -8.809440564191709 1.6252048387108233 0.9999690323378284 1.1223328084370692 0.4079689409075986 0.04447251854400641 14.422552232598793 27.478653103164255 0.04288236922949234 0.012046346204008362 1.5508130103467795e-09 8.809440564191709 0.12236377609924076 SRPTS(ph)EGS(ph)DIESTEPQK ddPTM_KYSE-520_SHP099_60min_R1 4 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 2 SRPT(0.161)S(0.84)EGS(0.999)DIESTEPQK;S(0.039)RPT(0.153)S(0.824)EGS(0.985)DIESTEPQK;S(0.005)RPT(0.248)S(0.746)EGS(1)DIESTEPQK;S(0.003)RPT(0.336)S(0.665)EGS(0.997)DIESTEPQK 166.77 7.2911e-07 2929200000.0 6335200.0 5281690.0 5696900.0 5446600.0 5502490.0 5349200.0 5283390.0 5440530.0 6758300.0 5266060.0 True False 5983773.827091903 5027949.684421686 6064131.289362284 5964243.226419998 5935504.658114562 5315813.658615007 5817486.622117372 5421658.071259253 5531163.082878814 5219406.805332689 1.1464471060156218 0.9633182221559374 1.1618430054477717 1.1427051864066828 1.1371990878446634 1.0184708448446325 1.114587699156468 1.0387498567308306 1.059730212488439 1.0 22.3154544206338 -7.771425790756616 0.7103288166357523 1.0024042627820777 1.1004345297787528 0.2168473901002651 0.05962658926819979 1.1002289131036402 1.259525285457414 0.058071513858296904 0.024194685170835326 1.6926774527663063e-08 7.771425790756616 0.09803026699667505 SRPTS(ph)EGSDIES(ph)TEPQK ddPTM_KYSE-520_SHP099_60min_R1 2 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 2 S(0.001)RPT(0.267)S(0.706)EGS(0.104)DIES(0.803)T(0.119)EPQK;S(0.013)RPT(0.101)S(0.878)EGS(0.224)DIES(0.65)T(0.134)EPQK 196.36 5.7376e-12 1304660000.0 2518400.0 2180760.0 2168120.0 2195480.0 2282190.0 2407200.0 2270700.0 2303860.0 2874300.0 2218130.0 True False 2378699.3316940637 2075993.0162125053 2307880.484314652 2404137.7591048707 2461785.3691151584 2392175.7718945006 2500244.515896412 2295868.447384968 2352399.575206572 2198479.093879027 1.0819749609249427 0.9442859938911653 1.049762306469149 1.093545881695412 1.1197674683235448 1.0881048532846007 1.1372609923185333 1.0442985124475785 1.0700122560892613 1.0 21.06807438283882 -4.997163353058216 24.993778779411585 1.0842965385480565 1.009103883521481 0.22909945129393194 0.04752348450893056 102.32300505393347 901527.2542392822 0.011833749276948025 0.02442052678723761 1.0065529985164519e-05 4.997163353058216 -0.07519265502657557 SRPTSEGS(ph)DIESTEPQK ddPTM_KYSE-520_SHP099_60min_R1 3 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 1 S(0.002)RPT(0.015)S(0.015)EGS(0.969)DIESTEPQK;SRPTSEGS(0.999)DIES(0.001)TEPQK;S(0.001)RPT(0.163)S(0.163)EGS(0.673)DIESTEPQK 258.8 3.1693999999999997e-29 4420360000.0 4639500.0 3970100.0 4025500.0 3985100.0 4123000.0 4116200.0 3579540.0 3968310.0 5104400.0 3384810.0 True False 4382137.686386046 3779370.436758404 4284990.171027729 4363842.7058359925 4447456.64333899 4090509.268973135 3941394.836143843 3954544.858820518 4177569.631452677 3354823.2167423326 1.306220150294917 1.1265483134543 1.2772625841037986 1.3007668136008246 1.3256903139169427 1.2192920475091926 1.1748442709214033 1.17876400732094 1.2452428523221155 1.0 21.67780531457263 -9.69610152284304 0.3710850374186727 0.9164345465378384 1.2585631454106685 0.6026418274598309 0.05970550084832796 7.683213047330227 0.936251920111395 0.8115970701032944 0.04814762270238581 2.0132535666601277e-10 9.69610152284304 0.3421285988728301 SRPTSEGSDIES(ph)TEPQK ddPTM_KYSE-520_SHP099_60min_R1 1 SRPTSEGSDIESTEPQK 17 1 Q4G0J3;Q4G0J3-3;H0YA82;D6RFF0 Q4G0J3 LARP7 La-related protein 7 1 SRPTSEGS(0.156)DIES(0.777)T(0.067)EPQK 271.64 1.3672e-29 1653700000.0 1417300.0 1221000.0 1175700.0 1175100.0 1266500.0 1229000.0 1157400.0 1200100.0 1392000.0 1072700.0 True False 1338679.5436824965 1162341.3272416343 1251487.5031865113 1286781.150693303 1366166.3446007331 1221329.355125596 1274401.287135467 1195937.1332054464 1139247.8894644089 1063196.712547972 1.25910805393136 1.09325143082512 1.1770987329214897 1.2102945160632657 1.2849610316483093 1.1487331936896756 1.1986505150879736 1.1248502926042343 1.0715306735046035 1.0 20.019977118179877 -7.7674277417373085 1.33272169710373 1.0016480221464508 1.1956057568600442 0.6293316457025703 0.050535701005341355 0.27222388229707123 0.986044507137381 0.04826338668491823 0.01519238146494093 1.708331930046167e-08 7.7674277417373085 0.19395773471359345 SRPVS(ph)MDAR ddPTM_KYSE-520_SHP099_60min_R1 3 SRPVSMDAR 9 1 O94804 O94804 STK10 Serine/threonine-protein kinase 10 1 S(0.007)RPVS(0.993)MDAR;SRPVS(1)MDAR;S(0.003)RPVS(0.997)MDAR 101.39 0.0014995 2182540000.0 2451470.0 2896320.0 2874980.0 3095000.0 3034010.0 2426590.0 2538760.0 3338300.0 3367300.0 3009330.0 True False 2315482.0722157108 2757176.4397350475 3060305.8109306404 3389147.8694543196 3272769.3258445105 2411444.7517121425 2795402.6367098973 3326720.216465081 2755883.2027252144 2982669.677423311 0.7763119361631843 0.9243988567037487 1.0260290752593155 1.1362799894027018 1.097261741927726 0.8084853545684475 0.9372149580857404 1.1153498631263086 0.9239652729852357 1.0 21.50817278128128 -4.3819592592307295 2.6826493287211215 1.0075818856377023 0.7597371388889477 0.3564368986320653 0.09413091353361343 0.4186158424574396 4.646215473124863 0.026185846264466715 0.20167662525394142 4.149929709205491e-05 4.3819592592307295 -0.24784474674875467 SRQPS(ph)PLLLLPPPAGLTSDPGPSVR ddPTM_KYSE-520_SHP099_60min_R1 5 SRQPSPLLLLPPPAGLTSDPGPSVR 25 1 I3L2J0 I3L2J0 CIC 1 S(0.263)RQPS(0.737)PLLLLPPPAGLTSDPGPSVR;S(0.094)RQPS(0.906)PLLLLPPPAGLTSDPGPSVR;S(0.166)RQPS(0.834)PLLLLPPPAGLTSDPGPSVR;S(0.235)RQPS(0.765)PLLLLPPPAGLTSDPGPSVR;S(0.012)RQPS(0.988)PLLLLPPPAGLTSDPGPSVR 100.68 0.0015737 1203658000.0 389983.0 442802.0 364096.0 310591.0 319194.0 399633.0 289573.0 413793.0 501932.0 430186.0 True False 368349.8655781637 421529.12726064754 387566.2107341974 340109.4752574111 344312.7518345735 397138.7422106656 318845.86480013706 412357.6486630124 410793.8014760409 426374.88671964384 0.8639107908350296 0.9886349791933629 0.9089799207358934 0.7976770814859102 0.8075352525651235 0.9314308946900947 0.747806389942917 0.9671246161694128 0.9634568410830255 1.0 18.701762940976682 -7.481326710076238 24.994562602452675 0.9762493138578792 0.8673969464719709 0.3790953528658605 0.06634322103006327 537.6860707173219 323432.40477452736 0.03764349464367648 0.018080467069887654 3.3012110483962154e-08 7.481326710076238 -0.10885236738590831 SRS(ph)APPNLWAAQR ddPTM_KYSE-520_SHP099_60min_R1 5 SRSAPPNLWAAQR 13 1 Q92934;F5H1R6;F5H3B1 Q92934 BAD Bcl2-associated agonist of cell death 1 S(0.037)RS(0.963)APPNLWAAQR;S(0.014)RS(0.986)APPNLWAAQR;S(0.005)RS(0.995)APPNLWAAQR;S(0.005)RS(0.995)APPNLWAAQR;S(0.008)RS(0.992)APPNLWAAQR 219.68 1.436e-11 6355010000.0 1661010.0 1732380.0 1750920.0 1467730.0 1657050.0 1729800.0 1533940.0 1635810.0 2351040.0 1569200.0 True False 1568870.464158655 1649153.8644446046 1863787.1047710506 1607222.6179108853 1787450.407675206 1719003.6765632716 1689005.6250117307 1630135.7569109232 1924150.4008954044 1555298.1088191278 1.0087265298289547 1.0603458302259092 1.1983471812912738 1.0333855669195031 1.1492654672050888 1.1052567136910096 1.0859690598441745 1.0481178802105124 1.2371585807150056 1.0 20.568759702024085 -4.526648459624861 24.991727318801775 1.108439637069613 1.0216313210351327 0.1665525126354337 0.06930458536783292 145.92945673962035 967462.1591786705 0.01633800389024144 0.04366397363985676 2.974072425441709e-05 4.526648459624861 -0.08680831603448036 SRS(ph)DIDVNAAAGAK ddPTM_KYSE-520_SHP099_60min_R1 9 SRSDIDVNAAAGAK 14 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 S(0.257)RS(0.743)DIDVNAAAGAK;S(0.027)RS(0.973)DIDVNAAAGAK;S(0.181)RS(0.819)DIDVNAAAGAK;S(0.01)RS(0.99)DIDVNAAAGAK;S(0.006)RS(0.994)DIDVNAAAGAK;S(0.229)RS(0.771)DIDVNAAAGAK;S(0.002)RS(0.998)DIDVNAAAGAK;S(0.246)RS(0.754)DIDVNAAAGAK;S(0.228)RS(0.772)DIDVNAAAGAK 245.75 8.773399999999999e-19 36094170000.0 29916300.0 25607800.0 26103960.0 23831500.0 25648800.0 25331540.0 24931300.0 26132100.0 31427800.0 25082600.0 True False 28256783.202334486 24377562.84990858 27786663.029412754 26096438.59479828 27667214.638290845 25173436.462602362 27451599.110040154 26041453.844378013 25721303.750366017 24860387.67796752 1.1366187675092863 0.9805785479167389 1.1177083555313436 1.0497196959613873 1.1129035876946871 1.0125922728434473 1.104230531946575 1.0475079544900747 1.0346300340747092 1.0 24.567345458458743 -7.909781260915248 1.7380580604959763 1.0010133785391508 1.0700821145378743 0.19824574162853525 0.046539838785094864 0.5413096454154851 3.6014904353806516 0.04030515519677176 0.011682131048466502 1.2308885706433167e-08 7.909781260915248 0.06906873599872343 SRS(ph)DIDVNAAASAK ddPTM_KYSE-520_SHP099_60min_R1 11 SRSDIDVNAAASAK 14 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 S(0.069)RS(0.931)DIDVNAAASAK;S(0.007)RS(0.993)DIDVNAAASAK;S(0.043)RS(0.951)DIDVNAAAS(0.006)AK;S(0.001)RS(0.999)DIDVNAAASAK;SRS(0.999)DIDVNAAAS(0.001)AK;S(0.002)RS(0.936)DIDVNAAAS(0.062)AK;S(0.228)RS(0.772)DIDVNAAASAK;SRS(1)DIDVNAAASAK;SRS(0.997)DIDVNAAAS(0.003)AK;S(0.001)RS(0.999)DIDVNAAASAK;S(0.024)RS(0.871)DIDVNAAAS(0.105)AK 255.69 9.0772e-20 20176330000.0 24433350.0 20743470.0 19710920.0 18774850.0 19597770.0 19692430.0 19175190.0 20790550.0 24804520.0 19189790.0 True False 23077983.368824307 19746922.56461677 20981517.44178709 20559206.09913552 21140003.00294192 19569522.23983399 21113605.33702016 20718432.434600852 20300644.439064436 19019783.39003069 1.2133673079011373 1.0382306759059734 1.1031417662087915 1.0809379727169621 1.1114744352989085 1.028903528422487 1.110086529591444 1.089309589375267 1.067343619155259 1.0 24.180997480130937 -5.176336433744233 0.011843121386641585 1.857244116968163e-06 2.205084717853111 0.36401492159220716 0.044429625745156985 3915.992258355363 10.071368069411156 880.8013911224211 995.8156389187651 6.66290415824795e-06 5.176336433744233 2.205082860608994 SRS(ph)DVDMDPSSATAVLGPAR ddPTM_KYSE-520_SHP099_60min_R1 3 SRSDVDMDPSSATAVLGPAR 20 1 M0QYC1;M0QZR4;M0QZH8;M0QYS3 M0QYC1 ARHGEF1 1 S(0.001)RS(0.984)DVDMDPS(0.013)S(0.001)ATAVLGPAR;S(0.002)RS(0.998)DVDMDPSSATAVLGPAR;S(0.047)RS(0.867)DVDMDPS(0.069)S(0.016)AT(0.002)AVLGPAR 237.76 5.3265e-26 1291730000.0 952880.0 932660.0 899330.0 914910.0 967790.0 961310.0 821880.0 914530.0 1074960.0 937390.0 True False 900021.8468808144 887853.6136487994 957302.2507788759 1001862.771322278 1043949.5670281451 955310.1077101601 904963.6511758224 911357.7088829057 879774.3615363935 929085.4538783841 0.9687180475420789 0.9556210464199325 1.0303705076671938 1.0783322106056998 1.1236313760701677 1.0282263097783992 0.9740370462137068 0.9809191448198058 0.9469251271385793 1.0 19.825451770955176 -9.278823533522349 7.838574614970444 1.000005911282693 1.01269059091199 1.6702810440305527e-06 0.054027542150546906 0.0 0.0 0.059408956593988156 0.014408788420279296 5.262310459325522e-10 9.278823533522349 0.012684679629297202 SRS(ph)ES(ph)ETSTMAAK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSESETSTMAAK 13 1 Q96B23;A0A087WVF1;Q96B23-2 Q96B23 C18orf25 Uncharacterized protein C18orf25 2 SRS(0.995)ES(0.607)ET(0.39)S(0.008)TMAAK 187.56 9.2093e-08 555710000.0 1328700.0 1280200.0 1093200.0 1249900.0 1317500.0 1250400.0 1187700.0 1257700.0 1418100.0 1214700.0 True False 1254994.3623022176 1218697.2703806232 1163669.421181845 1368690.1202038624 1421179.7544504274 1242595.7897876704 1307764.306834969 1253337.3322493876 1160608.7873918652 1203938.7030222996 1.0424071916217585 1.0122585704083393 0.9665520497518978 1.1368436920982607 1.1804419534672141 1.0321088496186128 1.0862382806965434 1.0410308507427168 0.964009865683642 1.0 20.199330510344602 -9.960409954228679 13.73716114272247 0.9999999996655883 1.0541514164426637 0.05168955429457245 0.06493611370611965 0.0 0.0 0.06734802133558106 0.016334294327885468 1.0954436589752512e-10 9.960409954228679 0.05415141677707547 SRS(ph)ESETSTMAAK ddPTM_KYSE-520_SHP099_60min_R1 4 SRSESETSTMAAK 13 1 Q96B23;A0A087WVF1;Q96B23-2 Q96B23 C18orf25 Uncharacterized protein C18orf25 1 S(0.018)RS(0.769)ES(0.103)ET(0.032)S(0.071)T(0.007)MAAK;S(0.002)RS(0.428)ES(0.428)ET(0.127)S(0.015)TMAAK;S(0.043)RS(0.759)ES(0.181)ET(0.015)ST(0.001)MAAK;S(0.027)RS(0.874)ES(0.093)ET(0.003)S(0.003)TMAAK 197.73 2.1838000000000003e-08 4669720000.0 3753180.0 3548830.0 3434610.0 3531360.0 3835800.0 3605637.0 3611080.0 3729250.0 4511290.0 3581750.0 True False 3544983.6236211625 3378338.8798975665 3656010.456170297 3866979.3926579054 4137655.637283457 3583132.882039865 3976123.2071445864 3716314.1021634964 3692153.456366297 3550018.4815593325 0.99858173754184 0.9516398005944025 1.0298567388202464 1.0892842988691567 1.1655307313966452 1.009327951573364 1.1200288752857672 1.0468435929187385 1.0400378126326069 1.0 21.759395104697717 -4.979509180118231 4.23890329415091 1.0726308876636859 0.9761063710323096 0.3613007066645836 0.04831185913925468 0.195548587209095 8.290765035876936 0.012766893428398651 0.026870763547635595 1.0483126341107853e-05 4.979509180118231 -0.09652451663137629 SRS(ph)FDYNYR ddPTM_KYSE-520_SHP099_60min_R1 6 SRSFDYNYR 9 1 O75494;O75494-2;O75494-4;Q5JRI1;O75494-3;O75494-6 O75494;O75494-3 SRSF10 Serine/arginine-rich splicing factor 10 1 S(0.001)RS(0.999)FDYNYR;S(0.002)RS(0.998)FDYNYR;SRS(1)FDYNYR;S(0.001)RS(0.999)FDYNYR;S(0.003)RS(0.997)FDYNYR;S(0.031)RS(0.969)FDYNYR 194.39 2.4625e-06 8435670000.0 4205260.0 3981860.0 3112600.0 3657600.0 3727340.0 4388410.0 3590440.0 3816670.0 5360900.0 3329930.0 True False 3971985.8448220217 3790565.468706292 3313243.1763360873 4005217.2043024614 4020660.4523364375 4361020.305391964 3953396.714517592 3803430.8625874785 4387495.697291486 3300429.410846334 1.203475472545701 1.148506753772465 1.003882454036933 1.2135442712817777 1.2182234345395115 1.3213493647402872 1.1978431356614947 1.1524048507409705 1.3293711669374544 1.0 21.654222311551436 -5.462229666006444 24.999809588092823 1.2164067136290189 1.119460507203517 0.13159392807619674 0.09813787445232587 419.7934008807049 173039.7427831869 0.02654477912326804 0.039372230298895944 3.4496126676978614e-06 5.462229666006444 -0.09694620642550178 SRS(ph)FIFK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSFIFK 7 1 Q9UN19 Q9UN19 DAPP1 Dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide 1 S(0.047)RS(0.953)FIFK;S(0.018)RS(0.982)FIFK 96.95700000000001 0.0086029 914930000.0 2783540.0 2487650.0 2100830.0 2168090.0 2132150.0 2041140.0 2019630.0 2273810.0 2502400.0 2748890.0 True False 2629131.48735058 2368139.5599612254 2236252.8632468474 2374144.621739973 2299938.0747259837 2028400.4881375593 2223793.910089339 2265922.683821242 2048027.2403705015 2724536.9732040563 0.9649828624857018 0.8691897314119736 0.8207827183996749 0.8713937983186839 0.8441574099914878 0.7444936545501013 0.816209848484514 0.8316725763337747 0.7516973564730234 1.0 21.377579638398352 -2.0722391335654278 0.8800408755665007 0.8228699002105523 8.12765145135765 0.23879988202765012 0.06740410833064209 122.33711621462179 2.4395230965884536 0.02136326051149916 1702.3256062455785 0.00846761037632362 2.0722391335654278 7.304781551147098 SRS(ph)FTLDDESLK ddPTM_KYSE-520_SHP099_60min_R1 9 SRSFTLDDESLK 12 1 Q86WR7;Q86WR7-2;X6RHS9 Q86WR7 PROSER2 Proline and serine-rich protein 2 1 S(0.006)RS(0.994)FTLDDESLK;S(0.021)RS(0.916)FT(0.063)LDDESLK;S(0.033)RS(0.966)FTLDDESLK;S(0.095)RS(0.904)FT(0.001)LDDESLK;S(0.021)RS(0.92)FT(0.057)LDDES(0.002)LK;S(0.026)RS(0.543)FT(0.431)LDDESLK;S(0.164)RS(0.828)FT(0.007)LDDESLK;S(0.153)RS(0.847)FTLDDESLK;S(0.207)RS(0.793)FTLDDESLK 245.42 1.1515999999999998e-15 24276060000.0 19957380.0 20636730.0 19653580.0 18164970.0 20387970.0 22287600.0 21764970.0 23560100.0 30302600.0 25418300.0 True False 18850304.347349323 19645310.514436748 20920481.21363984 19891363.28730263 21992387.247318923 22148494.821234528 23965185.573237244 23478375.5120687 24800411.706382312 25193113.63713817 0.7482324185431903 0.7797889057062329 0.8304047492883185 0.7895555735508604 0.8729523299136425 0.8791487682008686 0.9512593766063601 0.9319362366332637 0.9844123304323543 1.0 24.58652610114118 -6.202809042871334 0.4655703295250589 1.004414490150812 0.740389995169024 0.9378271789576464 0.021020231375363324 0.2600648716475962 0.11788965542270224 0.019134302265727675 0.028752774587085674 6.268894442603391e-07 6.202809042871334 -0.26402449498178804 SRS(ph)GEGEVSGLMR ddPTM_KYSE-520_SHP099_60min_R1 10 SRSGEGEVSGLMR 13 1 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 S(0.007)RS(0.993)GEGEVSGLMR;S(0.003)RS(0.997)GEGEVSGLMR;S(0.269)RS(0.731)GEGEVSGLMR;S(0.26)RS(0.74)GEGEVSGLMR;S(0.067)RS(0.933)GEGEVSGLMR;S(0.002)RS(0.998)GEGEVSGLMR;S(0.195)RS(0.805)GEGEVSGLMR;S(0.003)RS(0.997)GEGEVSGLMR;S(0.196)RS(0.804)GEGEVSGLMR;S(0.082)RS(0.902)GEGEVS(0.016)GLMR 257.77 3.4319000000000003e-22 9841880000.0 7101626.0 6721539.0 6721866.0 6270881.0 6004053.0 6476634.0 6666616.0 7625477.0 9423450.0 6776534.0 True False 6707684.64903955 6398626.177204265 7155168.237725876 6866863.644830886 6476537.8127114745 6436210.924820607 7340542.605182217 7599026.000086713 7712389.025842944 6716499.180823675 0.9986876300365982 0.9526728143543929 1.0653121581782736 1.0223873270820187 0.9642728508331667 0.9582686979545353 1.0929120078120835 1.1313968475992293 1.1482751383135192 1.0 22.679278026957103 -6.833089036777218 6.777896205632795 1.1055260341584592 0.9951161213245117 0.49687848656341027 0.04849406762166232 0.1722795681825966 13.115946478091612 0.020437214687119537 0.01377813228224178 1.4686251569496943e-07 6.833089036777218 -0.11040991283394752 SRS(ph)GS(ph)QGRTDSVEK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSGSQGRTDSVEK 14 2 A0A0A0MRN0;Q5VTL8 A0A0A0MRN0 PRPF38B Pre-mRNA-splicing factor 38B 2 S(0.145)RS(0.854)GS(0.873)QGRT(0.103)DS(0.025)VEK 77.87100000000001 0.009653799999999999 686630000.0 1550800.0 1548600.0 1574700.0 1306600.0 1351600.0 1324100.0 1067900.0 1136100.0 2119800.0 1362800.0 True False 1464774.0325568432 1474202.9315040105 1676207.681609083 1430778.871156384 1457963.2304479682 1315835.800750043 1175853.75369964 1132159.134267734 1734897.7558093774 1350726.652242357 1.084434093400878 1.0914147056006256 1.2409673554796532 1.059266039343439 1.079391768887944 0.9741688287305272 0.870534205975422 0.8381852333987957 1.2844180966809633 1.0 20.365304314043335 -5.987024308165161 2.1149346969398155 0.9767196611834839 1.128964122707865 0.1901590182440599 0.12091776825785933 0.479656144879416 4.32494592959895 0.043896688889614094 0.04849857644888837 1.0303284496765086e-06 5.987024308165161 0.1522444615243812 SRS(ph)HSDNDRPNCS(ph)WNTQYSSAYYTSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSHSDNDRPNCSWNTQYSSAYYTSR 26 2 O75494-3;O75494-6 O75494-3 SRSF10 Serine/arginine-rich splicing factor 10 2 S(0.058)RS(0.934)HS(0.177)DNDRPNCS(0.293)WNT(0.224)QY(0.002)S(0.245)S(0.065)AYYT(0.002)S(0.001)R 60.971000000000004 0.0274 785050000.0 221630.0 254190.0 224460.0 298780.0 165560.0 196540.0 245590.0 255270.0 307990.0 181090.0 True False 209335.74209154828 241978.33085303113 238929.05074869836 327175.96136851725 178588.63009245784 195313.32095718887 270416.63392742316 254384.52795046594 252066.77979608017 179485.68348588812 1.1663088555361414 1.3481762230470957 1.331187235150618 1.8228526922830652 0.9950020894368391 1.0881832866215493 1.5066195179220765 1.4172970401311515 1.4043837642120278 1.0 17.45350924780197 SRS(ph)IDKDR ddPTM_KYSE-520_SHP099_60min_R1 4 SRSIDKDR 8 2 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.12)RS(0.88)IDKDR;S(0.146)RS(0.854)IDKDR;S(0.139)RS(0.861)IDKDR;S(0.149)RS(0.851)IDKDR 62.408 0.024206000000000002 19106290000.0 16942480.0 15445860.0 13431310.0 12931720.0 14658380.0 14857430.0 13908700.0 13260350.0 17618360.0 14620810.0 True False 16002646.860403443 14703817.700891463 14297113.733455831 14160746.780736597 15811911.11122661 14764699.268286167 15314727.131830884 13214352.940838948 14419309.946712764 14491280.99821805 1.1042948420068068 1.0146665227663136 0.9866010972538525 0.9771908213275211 1.0911327378974263 1.018867777810791 1.0568235571247353 0.9118830103745748 0.9950334927937609 1.0 23.78868179589662 -7.2456193269707745 24.980940976164074 0.9650936825481455 1.032199655431467 0.3173006443719446 0.04451261938230641 938.6224115746743 1482151.9359496592 0.02110837247805795 0.012133994334474972 5.680422945290445e-08 7.2456193269707745 0.06710597288332143 SRS(ph)KS(ph)ETK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSKSETK 8 2 P30414;A0A087WYW3 P30414 NKTR NK-tumor recognition protein;Putative peptidyl-prolyl cis-trans isomerase 2 S(0.396)RS(0.619)KS(0.98)ET(0.005)K 58.37 0.045834 0.0 106340.0 105770.0 70513.0 74280.0 112250.0 92619.0 57114.0 115480.0 117420.0 104130.0 True False 100441.10821646545 100688.65043599327 75058.38080478899 81339.54886690367 121083.43638486568 92040.93046572637 62887.64049892432 115079.42683323461 96099.48791732095 103207.48921191414 0.973195927770624 0.9755944186303285 0.7272571145556397 0.7881167295901423 1.1732039729815262 0.8918047630898212 0.6093321422614808 1.115029807545691 0.9311290164224569 1.0 16.65518813760943 SRS(ph)LDRR ddPTM_KYSE-520_SHP099_60min_R1 4 SRSLDRR 7 2 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6;H0Y5D8;CON__Q28107;A0A0A0MRJ7;P12259 Q1RLN5 ARHGAP12;F5 Rho GTPase-activating protein 12;Coagulation factor V;Coagulation factor V heavy chain;Coagulation factor V light chain 1 S(0.005)RS(0.995)LDRR;S(0.053)RS(0.947)LDRR;S(0.011)RS(0.989)LDRR;S(0.015)RS(0.985)LDRR 64.654 0.037721 2903510000.0 624286.0 505209.0 454322.0 390753.0 513601.0 465883.0 392862.0 421395.0 557088.0 465221.0 True False 589655.6110967132 480938.0013058303 483608.3230609023 427890.04763582646 554018.4767100532 462975.2513864757 432576.32492363325 419933.27909933205 455934.86224565294 461099.50387646153 1.2788033952313569 1.043024330459232 1.048815535465142 0.9279776795215711 1.2015160980491677 1.0040679885669899 0.9381409463401412 0.9107216025368815 0.988799290419119 1.0 18.81471858790872 -6.511932691518203 20.23437714504145 0.9547079859144987 1.0862906860183716 0.34303453652577975 0.09170619588520966 52.836433535115425 97675.10905239129 0.03362480602795701 0.02789509154350579 3.076573595958023e-07 6.511932691518203 0.13158270010387296 SRS(ph)LS(ph)S(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSLSSPR 8 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.487)RS(0.915)LS(0.608)S(0.99)PR 72.434 0.030195 341860000.0 466590.0 439990.0 459900.0 471840.0 371280.0 413720.0 346340.0 355320.0 484040.0 381750.0 True False 440707.3225758952 418852.2199615456 489545.88986601686 516683.5317361309 400497.6237057726 411137.8200183579 381351.4271526675 354087.4778523116 396150.5376554252 378367.99199700577 1.1647584676755183 1.106996968086191 1.2938353672101601 1.3655582466400056 1.0584870606838803 1.0866083514316176 1.0078850093527079 0.93582830826534 1.046998017894072 1.0 18.529430523631202 -5.918710035448199 7.428383040706057 1.0176424682654326 1.2278386749747734 0.6624925072086807 0.07395181586388565 0.15958739813666495 12.416399947647605 0.025426444043928877 0.028876712588830216 1.2058407730243039e-06 5.918710035448199 0.2101962067093408 SRS(ph)PAPPADK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPAPPADK 10 1 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J7T7;A0A384DVL6 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 S(0.248)RS(0.752)PAPPADK 49.466 0.050638 199810000.0 416120.0 348450.0 384190.0 351380.0 386170.0 356700.0 364380.0 393850.0 417970.0 370050.0 True False 393036.9940853452 331709.938965887 408955.50212573446 384775.0495537512 416559.3819932615 354473.7029888531 401215.0864061015 392483.82627528114 342077.1841662633 366771.64489454357 1.0716122676232336 0.904404535037768 1.1150139543729447 1.0490861409539554 1.1357458729205558 0.9664697582899942 1.0939097719003368 1.07010405994752 0.9326707473927529 1.0 18.484522582968268 -9.471047823279754 8.655171272090978 0.9999999999999977 1.0397583946688316 0.022012063408888283 0.07415629313561578 0.0 0.0 0.06897806012555875 0.016729636801700642 3.3802761151216037e-10 9.471047823279754 0.03975839466883391 SRS(ph)PAYSR ddPTM_KYSE-520_SHP099_60min_R1 5 SRSPAYSR 8 1 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 S(0.238)RS(0.762)PAYSR;S(0.179)RS(0.821)PAYSR;S(0.177)RS(0.823)PAYSR;S(0.101)RS(0.899)PAYSR;S(0.174)RS(0.826)PAYSR 84.507 0.0038076 2735170000.0 440460.0 470332.0 422306.0 379846.0 368258.0 391788.0 365268.0 393280.0 451367.0 440712.0 True False 416026.80576475797 447736.5447372747 449528.5204734906 415946.4496351355 397237.80949860025 389342.7057656205 402192.85411214584 391915.8034722419 369410.13083612145 436807.63454874785 0.9524256740488112 1.0250199614753006 1.02912239832503 0.9522417117659507 0.9094113245272695 0.8913367692573372 0.9207550928628767 0.897227457750636 0.8457043824743297 1.0 18.73663854642114 -5.5452700902776995 3.1512260400200627 0.9051716392309911 1.0040271261022446 0.4942211824094599 0.041111395139896145 0.18767113955147105 3.8450569644560453 0.012081358020810765 0.01710404576307972 2.8492457537983413e-06 5.5452700902776995 0.09885548687125356 SRS(ph)PES(ph)QVIGENTK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPESQVIGENTK 14 1 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 S(0.07)RS(0.935)PES(0.994)QVIGENTK 125.39 0.00022225 1830700000.0 3166800.0 2501200.0 2485000.0 2839600.0 2733400.0 2941900.0 2889200.0 3150900.0 3181000.0 2877800.0 True False 2991131.291140713 2381038.597622258 2645187.0761405774 3109474.730243133 2948503.0290814447 2923538.5108576063 3181268.53187471 3139970.2633255864 2603410.586484399 2852304.930894523 1.0486716405186916 0.8347770155400359 0.92738579507732 1.0901620989267644 1.0337264424798904 1.0249740408858543 1.115332549972846 1.1008536392148114 0.912739223035292 1.0 21.44369679331255 -5.246904083140069 23.46882122056044 1.046177107919935 0.926727996705407 0.2869308290097592 0.07319489898157745 390.17376274540675 629974.3511030151 0.01930991107206989 0.033215906773209736 5.663643606080128e-06 5.246904083140069 -0.11944911121452795 SRS(ph)PES(ph)QVIGENTKQP ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPESQVIGENTKQP 16 2 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 S(0.037)RS(0.969)PES(0.993)QVIGENTKQP 150.92 1.4959e-05 400150000.0 1237400.0 1284500.0 1212800.0 980830.0 1039400.0 1060900.0 845890.0 897140.0 1490100.0 918770.0 True False 1168758.9553042557 1222790.6919261923 1290979.0285486097 1074047.7883027075 1121194.8666229788 1054278.5295791258 931400.8162908418 894028.0307340497 1219535.4023641627 910630.4125922427 1.2834613682374305 1.3427957984022736 1.4176761622463816 1.1794552141579298 1.2312293232457872 1.157745793464077 1.022808818387114 0.9817682545754959 1.3392210335832917 1.0 19.796506116709946 -5.846853493632203 1.2108465013354412 1.089536159628914 1.343097909280032 0.482370091723212 0.10577218661514148 0.3920701716201833 1.214471971935057 0.04452941207045441 0.05929905042329611 1.4228086812612353e-06 5.846853493632203 0.253561749651118 SRS(ph)PESQVIGENTK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPESQVIGENTK 14 1 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 S(0.021)RS(0.962)PES(0.017)QVIGENTK 137.19 1.0806e-05 741610000.0 575190.0 528380.0 469900.0 517770.0 516020.0 592650.0 531960.0 608720.0 736180.0 548560.0 True False 543283.0640871617 502995.8316854509 500190.5058665829 566978.7051267733 556627.8382478252 588951.0515176448 585735.7082292924 606608.4923963153 602508.269587578 543700.1851732226 0.9992328104763695 0.9251345601900002 0.9199748675958653 1.0428149936092705 1.0237771724695732 1.08322760885212 1.0773137920537537 1.1157040386202006 1.1081627080844552 1.0 19.052451793925492 -5.6203829102250085 1.5189127896587618 1.0822938118878667 0.9461643294168759 0.6317497047853079 0.040104512682318044 0.23058130333916058 1.09392117657413 0.014059914319351339 0.02192279730588316 2.3967188400239507e-06 5.6203829102250085 -0.13612948247099077 SRS(ph)PGSPVGEGTGSPPK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPGSPVGEGTGSPPK 17 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.041)RS(0.537)PGS(0.409)PVGEGT(0.002)GS(0.011)PPK 191.97 3.7992e-12 1769200000.0 498160.0 424230.0 394760.0 317330.0 316430.0 346470.0 330560.0 371700.0 539660.0 365860.0 True False 470526.0717426606 403849.354017788 420206.8612383322 347488.94779125636 341331.2407595816 344307.55221347895 363976.2307547091 370410.6594554325 441671.3477215247 362618.7650347729 1.2975778341133009 1.1137023037929692 1.158811682561538 0.9582762429791362 0.9412950284766703 0.9495028537214889 1.0037435065441416 1.0214878411488506 1.2180046658069974 1.0 18.468094058984192 -4.429237683022945 1.21591632965882 1.0123040324182893 1.3573189101953997 0.5110189306743823 0.08231328653966637 0.9598044786931319 1.5182382691130143 0.026592778082970434 0.38823599642411366 3.721879574755071e-05 4.429237683022945 0.3450148777771105 SRS(ph)PIER ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPIER 7 1 G5E9M7;Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;F8W708;E7EWF5;E7EQU6;E7ERW0;G5E9M9;Q14135-6;F8WBN7;E7EUJ2;Q14135-5;C9JX59;C9JBN2 G5E9M7 VGLL4 Transcription cofactor vestigial-like protein 4 1 S(0.073)RS(0.927)PIER;S(0.215)RS(0.785)PIER 75.387 0.013908000000000002 1279660000.0 285500.0 322140.0 276822.0 234310.0 253434.0 241070.0 248500.0 269800.0 269830.0 198096.0 True False 269662.74586986017 306663.91085800173 294666.3890508605 256578.75195213003 273377.81395779096 239565.39270962405 273620.8051262858 268864.12677179364 220835.67386076236 196341.0235563561 1.3734406645407877 1.561894225176938 1.5007886977134042 1.306801540017865 1.3923621717257824 1.2201494540994955 1.3935997692695536 1.3693731544320953 1.1247556412854063 1.0 17.583002115900456 -9.117902148725195 0.1397389956829083 0.6481352301595074 1.640777227827299 0.6875194811413605 0.08972292384317987 11.01424184965913 0.48864230027294486 2.471781671125855 0.9050849699327534 7.622507340678156e-10 9.117902148725195 0.9926419976677916 SRS(ph)PIQR ddPTM_KYSE-520_SHP099_60min_R1 5 SRSPIQR 7 1 Q9Y252 Q9Y252 RNF6 E3 ubiquitin-protein ligase RNF6 1 S(0.02)RS(0.98)PIQR;S(0.056)RS(0.944)PIQR;S(0.244)RS(0.756)PIQR;S(0.116)RS(0.884)PIQR;S(0.142)RS(0.858)PIQR 97.965 0.0037159 6488390000.0 417359.0 478708.0 362758.0 402622.0 561590.0 393074.0 381496.0 416573.0 486365.0 397902.0 True False 394207.2642854607 455710.14912464225 386141.9611133218 440887.07382728206 605783.9379899936 390620.67936260346 420061.3387221638 415128.00549186865 398053.37626390613 394376.8978430713 0.9995698694357139 1.155519381629642 0.9791191198703878 1.1179333176932638 1.5360533066291435 0.9904755615731768 1.0651266365235033 1.0526174523971596 1.0093222459047226 1.0 18.58921551716832 SRS(ph)PITTNHRPS(ph)PDPEQRPLR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPITTNHRPSPDPEQRPLR 21 3 P41212 P41212 ETV6 Transcription factor ETV6 2 S(0.451)RS(0.548)PIT(0.238)T(0.193)NHRPS(0.57)PDPEQRPLR;S(0.426)RS(0.573)PIT(0.049)T(0.277)NHRPS(0.674)PDPEQRPLR 81.315 0.013118000000000001 4125400000.0 501970.0 529350.0 395670.0 407200.0 345970.0 430560.0 341166.0 368130.0 428320.0 362431.0 True False 474124.7234476137 503919.23142945155 421175.5212943842 445900.16557085543 373195.8706999736 427872.7153318776 375654.38873929373 366853.04295218823 350547.8850685308 359220.14330705104 1.3198723186365013 1.4028145158850847 1.1724718926309639 1.2413005614490633 1.0389057452743582 1.1911155966722733 1.0457497880852276 1.0212485290353353 0.975858095933369 1.0 18.45450872605926 -5.061182368515245 0.40485671195336576 0.9800910104474296 1.5111939963422796 0.7860066759336719 0.06461323263987219 1.2772434018262269 0.2637466053154274 0.05554447530020834 0.3103790901550604 8.685956128724277e-06 5.061182368515245 0.5311029858948499 SRS(ph)PLAIR ddPTM_KYSE-520_SHP099_60min_R1 4 SRSPLAIR 8 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.078)RS(0.922)PLAIR;S(0.006)RS(0.994)PLAIR;S(0.042)RS(0.958)PLAIR;S(0.12)RS(0.88)PLAIR 101.93 0.0015659 2007930000.0 1049879.0 675812.0 574835.0 514568.0 477781.0 715301.0 592110.0 556036.0 846200.0 589993.0 True False 991640.1189881 643344.977105507 611889.7838685194 563472.3880094899 515379.6464979735 710836.5411315665 651966.2572367215 554107.2408957784 692551.4109660786 584766.1210276084 1.695789279388301 1.100174845928075 1.0463837795412063 0.9635858982721176 0.8813432036594353 1.2155911835015591 1.1149179711215527 0.9475706970199416 1.1843220495555715 1.0 19.15750020426119 -4.25764831129841 3.8464226051468087 1.0433931157979668 1.7626567149392558 0.7933310778250289 0.09917841236887921 0.11228140251932323 3.283824449343773 0.02544128390329154 0.22949816444534366 5.5252468888118456e-05 4.25764831129841 0.719263599141289 SRS(ph)PLAR ddPTM_KYSE-520_SHP099_60min_R1 3 SRSPLAR 7 1 Q8N3Y1 Q8N3Y1 FBXW8 F-box/WD repeat-containing protein 8 1 S(0.195)RS(0.805)PLAR;S(0.186)RS(0.814)PLAR;S(0.183)RS(0.817)PLAR 67.704 0.020529 1541020000.0 206067.0 164136.0 155997.0 186118.0 225361.0 186000.0 162028.0 167650.0 194785.0 149316.0 True False 194636.05272561993 156250.66018684107 166052.81622402495 203806.59876158266 243095.6285713116 184839.10500680338 178407.3714808929 167068.46127980415 159416.95413026208 147993.17640609012 1.3151691007127433 1.0557963818419074 1.12203021961215 1.3771351065696549 1.6426137641931704 1.248970455905405 1.2055107932229718 1.1288930026163628 1.0771912462560123 1.0 17.175171132777248 -7.345023508463831 1.5730538512992696 1.0329129478948407 1.291216039522268 0.3265442041482316 0.1483946597594649 0.5850568192395088 2.573330669301286 0.14011030190719667 0.05100561589186084 4.518314859669169e-08 7.345023508463831 0.2583030916274274 SRS(ph)PLELEPEAK ddPTM_KYSE-520_SHP099_60min_R1 10 SRSPLELEPEAK 12 1 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.005)RS(0.995)PLELEPEAK;S(0.007)RS(0.993)PLELEPEAK;S(0.002)RS(0.998)PLELEPEAK;S(0.173)RS(0.827)PLELEPEAK;S(0.004)RS(0.996)PLELEPEAK;S(0.059)RS(0.941)PLELEPEAK;S(0.042)RS(0.958)PLELEPEAK;S(0.241)RS(0.759)PLELEPEAK;S(0.018)RS(0.982)PLELEPEAK;S(0.196)RS(0.804)PLELEPEAK 180.1 4.0051000000000003e-07 51971000000.0 55626300.0 52328600.0 45546100.0 44424610.0 47472400.0 47003430.0 47166460.0 49222100.0 57079000.0 48997820.0 True False 52540598.25072018 49814655.509170085 48482074.48233657 48646711.577654 51208207.79899237 46710064.15833293 51934506.07708959 49051360.02362446 46714892.44449636 48563737.434527166 1.0818895131692563 1.0257582743982459 0.9983184376552424 1.0017085617275379 1.0544536006527594 0.9618300943436792 1.0694091686643112 1.0100408785414157 0.9619295159783906 1.0 25.53337611897587 -4.2953433798163 3.0567520702812225 1.0096965811177239 1.0905320625957498 0.3228892705018539 0.03232456330004308 0.39416693754199655 5.747521052093318 0.00797963211945135 0.07391074179426849 5.065900087991119e-05 4.2953433798163 0.08083548147802588 SRS(ph)PLELEPEAKK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPLELEPEAKK 13 2 A0A087WTQ7;A0A087WV56;A0A087WW71;A0A087X0X5;Q92466-3;Q92466-2;Q92466-5;Q92466-4;Q92466 A0A087WTQ7 DDB2 DNA damage-binding protein 2 1 S(0.028)RS(0.972)PLELEPEAKK;S(0.1)RS(0.9)PLELEPEAKK 98.507 0.0012273 1374600000.0 763780.0 914930.0 839020.0 475190.0 626110.0 547550.0 452370.0 474130.0 1013500.0 577320.0 True False 721411.6008423171 870975.3894620708 893104.5716794637 520351.9147289168 675381.2949214106 544132.5373466404 498099.9743057467 472485.35369277355 829473.9482558755 572205.393948163 1.260756379566165 1.5221376776133184 1.5608111722210913 0.9093796043035139 1.1803127025093973 0.9509391961375572 0.8704915744832534 0.8257268433501987 1.449608754179306 1.0 19.126173571863003 -5.2613402404133645 24.99999954035758 1.0161185920239075 1.4553253497016492 0.5210644054940222 0.1848457008634771 6.745249672008593 1700751.9006221648 0.05060332605749897 0.08099681718852467 5.4784759513850695e-06 5.2613402404133645 0.43920675767774164 SRS(ph)PLGFYVHLK ddPTM_KYSE-520_SHP099_60min_R1 4 SRSPLGFYVHLK 12 1 Q8IXT5;B9ZVT1 Q8IXT5 RBM12B RNA-binding protein 12B 1 S(0.091)RS(0.909)PLGFYVHLK;S(0.106)RS(0.894)PLGFYVHLK;S(0.142)RS(0.858)PLGFYVHLK;S(0.356)RS(0.644)PLGFYVHLK 122.78 0.00052909 1449570000.0 1474830.0 1644340.0 1676160.0 1432460.0 1605030.0 1567530.0 1375850.0 1349550.0 1667860.0 1169468.0 True False 1393018.2398992828 1565343.4381953415 1784207.9555508234 1568600.5677151966 1731336.7296285185 1557746.4638242712 1514934.3450020163 1344868.7260373365 1365018.6673291004 1159107.4233523356 1.2018025351528139 1.3504731370523901 1.5392947362812939 1.3532831695431105 1.4936809951757521 1.3439189780348433 1.3069835586252816 1.160262369943027 1.1776463853378099 1.0 20.14458284745106 -7.515421232245801 0.9818101140443013 1.0230831154546198 1.3945077705355817 0.6575226102586473 0.08985499760107378 0.32148638400455154 0.5798600682194851 0.08519880537272448 0.03155374874693043 3.051959511185347e-08 7.515421232245801 0.3714246550809619 SRS(ph)PLHPMSEIPR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPLHPMSEIPR 13 1 Q9NVW2-2;Q9NVW2 Q9NVW2-2 RLIM E3 ubiquitin-protein ligase RLIM 1 S(0.216)RS(0.784)PLHPMSEIPR 94.92200000000001 0.0013749 805490000.0 146010.0 152300.0 157020.0 168970.0 128780.0 138520.0 128980.0 140730.0 163790.0 146170.0 True False 137910.53423628112 144983.27939303927 167141.76044088288 185028.85799731687 138914.2533420313 137655.44529861503 142018.5571234944 140241.84047662886 134049.86480989607 144875.04751853924 0.95192744781418 1.0007470705021593 1.1536959835646938 1.2771616725346666 0.9588556188342567 0.9501666964492257 0.9802830753537505 0.9680192888888096 0.9252791775115179 1.0 17.144449608867866 SRS(ph)PNRFDAHDPR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPNRFDAHDPR 13 2 Q96T58;A0A669KB49;F6WRY4 Q96T58 SPEN Msx2-interacting protein 1 S(0.195)RS(0.805)PNRFDAHDPR;S(0.235)RS(0.765)PNRFDAHDPR 66.82600000000001 0.017207 5770100000.0 2582220.0 2488360.0 2566520.0 2551130.0 2483540.0 2331130.0 2139050.0 2182170.0 2892130.0 1810910.0 True False 2438979.1090720496 2368815.4504954936 2731961.985777194 2793588.6281747953 2678980.4685903764 2316580.5529812337 2355286.0491162254 2174600.5615923055 2366992.096664294 1794866.7462666589 1.3588636115439494 1.3197723203812506 1.5220973877084207 1.556432327907065 1.492579030818128 1.2906699384785778 1.312234489839006 1.2115665779175513 1.3187564489607164 1.0 20.77544530939681 -7.912953393549192 0.5262319598634634 1.0040294671596932 1.448793759104927 0.6757677667596507 0.0881708722940856 0.6037481708611815 0.4167947143098721 0.10897722141273566 0.053344501914731605 1.2219307850207214e-08 7.912953393549192 0.4447642919452337 SRS(ph)PPPVSK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPPPVSK 9 1 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 S(0.398)RS(0.602)PPPVSK 130.15 0.00037877 3375500000.0 2861500.0 2695200.0 1925700.0 2850100.0 2717500.0 3453000.0 2686100.0 3053700.0 4252300.0 2502000.0 True False 2702766.890741169 2565718.546422321 2049833.7032289396 3120972.6470861873 2931351.7895400655 3431448.5461746883 2957637.201809725 3043107.4274389404 3480189.5117596993 2479834.226526543 1.0898982124812768 1.0346330891706719 0.8266011015180248 1.2585408386179404 1.1820757041675138 1.3837411023159614 1.192675369253384 1.2271414737675281 1.4033960312880813 1.0 21.24181225100017 -5.285020776016738 24.597720844276985 1.2470144111843882 0.9888030308807576 0.46720677353797335 0.12267566599066604 501.17117811667066 522769.81500321353 0.033122389434910006 0.049161772863261996 5.1877522088284355e-06 5.285020776016738 -0.25821138030363056 SRS(ph)PPTSELMMK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPPTSELMMK 12 1 F6VUX8;Q9HC77-2;Q9HC77 F6VUX8 CENPJ Centromere protein J 1 S(0.052)RS(0.835)PPT(0.043)S(0.071)ELMMK 118.08 0.00021703 530210000.0 607710.0 498890.0 435250.0 469360.0 501330.0 530920.0 449410.0 540450.0 554500.0 487250.0 True False 573999.1148601494 474922.57555084344 463306.9114246227 513967.83328177006 540781.8188224917 527606.3313452256 494840.74861893064 538575.3050919786 453816.777807482 482933.3440747635 1.1885679916342409 0.9834122687484592 0.959359955383196 1.06426246931958 1.119785629750951 1.0925034227157158 1.0246564141620418 1.1152166478043006 0.9397089336975375 1.0 18.88146455209224 -7.769875930541247 24.99979272850131 0.9698544437333406 1.0629091534074986 0.26276941833336354 0.06554524337458652 299.78439050866467 888307.9095256225 0.060422117843319655 0.016639949404326643 1.6987288768403704e-08 7.769875930541247 0.09305470967415796 SRS(ph)PQAFR ddPTM_KYSE-520_SHP099_60min_R1 4 SRSPQAFR 8 1 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 S(0.029)RS(0.971)PQAFR;S(0.038)RS(0.962)PQAFR;S(0.011)RS(0.989)PQAFR;S(0.032)RS(0.968)PQAFR 112.85 0.0006893 4343330000.0 830330.0 779820.0 729870.0 692510.0 644550.0 648240.0 623650.0 686100.0 748760.0 614790.0 True False 784269.9396781826 742356.2766663161 776918.5880332901 758325.9421892771 695272.4180121621 644194.0937075808 686694.6282374577 683720.0792369436 612804.0587035713 609343.4388993819 1.287073741361291 1.2182887830993745 1.2750093599704437 1.2444967710803496 1.1410189617664355 1.0571937803599682 1.1269418597134488 1.1220602957043462 1.0056792599760163 1.0 19.216896065359716 -6.081516128163391 0.4379544967614629 1.0087148279814142 1.3125463978277652 0.8353793198055578 0.04083524813913649 0.5891293805117815 0.22747354802780295 0.042586797370879705 0.07588185738603122 8.288651345775033e-07 6.081516128163391 0.30383156984635096 SRS(ph)PQRPGWSR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPQRPGWSR 11 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.046)RS(0.954)PQRPGWSR;S(0.129)RS(0.871)PQRPGWSR 100.11 0.0010002000000000001 1221180000.0 82469.0 162054.0 67099.0 70379.0 108787.0 124001.0 90271.0 113159.0 94282.0 301550.0 True False 77894.28017212436 154268.68259198708 71424.30890219592 77067.79899978217 117347.9179866403 123227.06376316461 99396.47364006027 112766.47784050915 77162.76545580698 298878.50160234986 0.26062189068305985 0.5161585117862962 0.2389743943417654 0.2578566159379335 0.3926274969846064 0.4122981850568665 0.33256481515791564 0.3772987258566427 0.2581743586177036 1.0 18.189199601807015 -10.872178703736777 2.5573581702885857 1.3094307888436119 0.3431618714950819 0.8479168773273025 0.0840237395032634 17991549.7033458 10652474.28375896 33752648.4120179 0.020697589353948945 1.3422125531195905e-11 10.872178703736777 -0.9662689173485299 SRS(ph)PQWR ddPTM_KYSE-520_SHP099_60min_R1 4 SRSPQWR 7 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.031)RS(0.969)PQWR;S(0.008)RS(0.992)PQWR;S(0.003)RS(0.997)PQWR;S(0.043)RS(0.957)PQWR 81.525 0.011573 8338330000.0 6559410.0 6548020.0 5533780.0 5781370.0 6126110.0 6491760.0 5900010.0 6018170.0 8086160.0 5706800.0 True False 6195546.451440342 6233443.290421605 5890496.313161057 6330829.666567725 6608200.00420214 6451242.517843903 6496440.58934865 5997294.372921442 6617917.179505402 5656242.191823222 1.0953467410565887 1.1020467439376618 1.0414151504467892 1.119264248571198 1.168302166013168 1.1405527378530484 1.1485435681555567 1.0602966014417226 1.1700201220294981 1.0 22.431412464835986 -5.479348779104331 23.793514666218158 1.1227320460828327 1.081595963625551 0.07944012522969723 0.051458493577157066 566.036169811794 309394.58089645585 0.013767634337396535 0.020418036054794055 3.316280222495913e-06 5.479348779104331 -0.04113608245728173 SRS(ph)PS(ph)HTRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPSHTRPR 10 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.529)RS(0.655)PS(0.802)HT(0.014)RPR 79.88600000000001 0.012351 6508200000.0 5217100.0 4995400.0 4124300.0 4999400.0 4070900.0 4964400.0 4407100.0 4707400.0 5239200.0 3715900.0 True False 4927697.062968996 4755413.485751732 4390158.977113316 5474541.472875585 4391256.669747436 4933415.338149325 4852612.677151132 4691071.1281154165 4287893.3494841475 3682980.016926458 1.337964648279924 1.2911863392949516 1.1920127062695869 1.4864434364876709 1.1923107509586905 1.3395172701117144 1.3175777915843168 1.2737161501164582 1.1642456189763704 1.0 21.812442138823755 -8.015472127052691 1.8280787053826049 1.0006636855803501 1.3069243152741683 0.6034406544348844 0.07817897279563871 0.24060547380731268 1.8308491731294678 0.07059150198749786 0.020066063394202818 9.65001243436801e-09 8.015472127052691 0.3062606296938182 SRS(ph)PS(ph)PAPEKK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPSPAPEKK 11 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.14)RS(0.864)PS(0.996)PAPEKK 60.55 0.029227999999999997 680230000.0 1297100.0 1042500.0 911090.0 1105000.0 1135500.0 1257200.0 1185400.0 1215100.0 1675200.0 1071200.0 True False 1225147.2772952544 992416.7351755981 969820.3191955424 1210018.8677696353 1224857.3898887746 1249353.3484653397 1305231.8003891336 1210885.1017064732 1371025.9083554442 1061710.0013809886 1.153937775571182 0.9347342813807354 0.9134512418024475 1.1396886778835447 1.1536647373534927 1.1767369120007154 1.229367528507211 1.140504563516826 1.2913374712229533 1.0 20.017958327271298 -5.407559548873946 5.41134657637181 1.1736906473997195 0.9950709330890428 0.39136936717346726 0.09183654209775155 0.2066004295312045 8.4087097993003 0.025186109368629805 0.03760931849769536 3.912374783940711e-06 5.407559548873946 -0.1786197143106767 SRS(ph)PSTESQLMSK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPSTESQLMSK 13 1 P35612;P35612-4;P35612-3;A0A1C7CYY0;P35612-5;P35612-6 P35612 ADD2 Beta-adducin 1 S(0.122)RS(0.691)PS(0.155)T(0.016)ES(0.004)QLMS(0.012)K 75.67 0.024719 730210000.0 657150.0 709260.0 609040.0 560460.0 571000.0 588170.0 565500.0 585210.0 714200.0 576650.0 True False 620696.5795039533 675186.0849790359 648299.6928984538 613725.9498915573 615934.4514544175 584499.012859417 622666.2587481475 583180.04309904 584519.283516868 571541.3296269112 1.0860047162453317 1.1813425381149278 1.1343006346044102 1.0738085210603812 1.077672636301709 1.0226714719668029 1.0894509748833203 1.020363730265537 1.0227069386188197 1.0 19.124498301646256 -5.637971723600911 1.1888600005900907 1.0338778905490449 1.1411285154090172 0.6417897777108379 0.032271140805743816 0.2992213626202754 0.8819374369972025 0.012646195483738317 0.021208147736599896 2.301591666436284e-06 5.637971723600911 0.10725062485997228 SRS(ph)PTIK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPTIK 7 1 Q8TF01 Q8TF01 PNISR Arginine/serine-rich protein PNISR 1 S(0.121)RS(0.841)PT(0.038)IK 59.931000000000004 0.066664 518160000.0 904120.0 807150.0 695190.0 678040.0 799260.0 851520.0 763210.0 808010.0 1018500.0 846660.0 True False 853966.6612814626 768373.30244315 740003.059743328 742480.7177398402 862157.2148326746 846205.3478246944 840362.7150118027 805207.2019009524 833566.0742956181 839159.2510915135 1.0176455305362941 0.915646584892807 0.8818386483623808 0.8847911963957719 1.027405958655937 1.0083966144972074 1.001434130552364 0.9595403981468369 0.9933347850379767 1.0 19.67858509792453 -5.764206572759338 24.998419874801012 0.99698534149467 0.9212322213263432 0.4663666875402348 0.038349054417002267 67.6093377054647 610774.1787202063 0.012357228187235954 0.01464498468913262 1.7210497606135153e-06 5.764206572759338 -0.0757531201683268 SRS(ph)PVDLR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPVDLR 8 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 S(0.073)RS(0.927)PVDLR 76.332 0.024236 737950000.0 957890.0 862560.0 840470.0 827280.0 876210.0 1044500.0 914820.0 924230.0 1199600.0 922950.0 True False 904753.9321936268 821121.3228710438 894648.0409995461 905904.442469199 945162.7420470668 1037980.8880623985 1007298.9333828139 921024.0618469046 981782.8794551028 914773.3810442348 0.9890470699539041 0.8976226679592655 0.9779996439973851 0.9903047697289663 1.0332206441863687 1.1346863710414479 1.1011458731264776 1.0068330374846877 1.073252567028541 1.0 19.803054859869153 -5.639600150315266 2.028802682467411 1.066649497400964 0.9492828812614114 0.5411234827728412 0.043848543482931844 0.23882850106464568 2.0076550412747824 0.014847668876336213 0.021095856305601124 2.292977798193677e-06 5.639600150315266 -0.11736661613955257 SRS(ph)PYSSR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSPYSSR 8 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YCQ1 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 S(0.241)RS(0.755)PY(0.001)S(0.002)SR;S(0.187)RS(0.805)PYS(0.007)S(0.001)R 59.418 0.024895 590120000.0 122373.0 143926.0 153353.0 112158.0 120738.0 137874.0 139294.0 137196.0 183537.0 106020.0 True False 115584.7257454725 137011.5789226697 163238.37975347554 122817.46259846777 130239.39369475203 137013.47722423653 153375.19689843396 136720.09909778723 150211.3073912565 105080.7452823119 1.099961038865307 1.3038695010638897 1.5534566234272156 1.1687913163206454 1.2394220591493563 1.3038875662342664 1.4595937294351433 1.3010956358414898 1.4294846024140389 1.0 16.6811388123324 -4.270874805138544 5.736333527470999 1.322584178774295 1.0939600530370848 0.1423896190535633 0.14800849519361145 0.2260513680400244 31.61737013454791 0.03520715129548583 0.19944244176490628 5.359511348565304e-05 4.270874805138544 -0.22862412573721014 SRS(ph)QPCDLDAR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSQPCDLDAR 11 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.139)RS(0.861)QPCDLDAR 95.98100000000001 0.0040284 0.0 224430.0 234920.0 203660.0 199040.0 209350.0 198480.0 184360.0 195940.0 252340.0 200270.0 True False 211980.42050988704 223634.0905778913 216788.24946752127 217956.70175644165 225824.6539614402 197241.21269758203 202996.9079802097 195260.3298727397 206521.4169737419 198495.7636077023 1.0679342302178054 1.1266441485364453 1.0921555479439418 1.0980420830905038 1.137679967859412 0.9936797093936991 1.02267627424736 0.9837002378481137 1.0404323660121086 1.0 17.598748691440413 -6.268251907585757 24.96142576860224 1.007990138350476 1.1046783179820754 0.8156707527241622 0.02291158474968691 206.87988204951782 758014.6378426111 0.007498698942405512 0.006756848588152322 5.391977762412617e-07 6.268251907585757 0.09668817963159948 SRS(ph)RDS(ph)GDENEPIQER ddPTM_KYSE-520_SHP099_60min_R1 4 SRSRDSGDENEPIQER 16 2 Q8WX93-3;Q8WX93;Q8WX93-8;Q8WX93-2;Q8WX93-9;Q8WX93-5;Q8WX93-4;Q8WX93-7 Q8WX93-3 PALLD Palladin 2 S(0.293)RS(0.708)RDS(0.999)GDENEPIQER;S(0.439)RS(0.903)RDS(0.658)GDENEPIQER;S(0.414)RS(0.588)RDS(0.999)GDENEPIQER;S(0.044)RS(0.956)RDS(1)GDENEPIQER 81.14399999999999 0.005627 2022480000.0 1166440.0 1177790.0 1036490.0 1129550.0 1194470.0 1364190.0 1115730.0 1272230.0 1887330.0 1098990.0 True False 1101735.2479595072 1121207.2005011686 1103303.8038426365 1236902.09238841 1288467.9933953716 1355675.5841894138 1228518.8768754576 1267816.9310707154 1544638.4477175751 1089253.803601282 1.0114587108320936 1.0293351253805518 1.0128987387465644 1.1355499409770013 1.1828905156313885 1.244591095029726 1.1278536488132873 1.163931607931108 1.4180702813345285 1.0 20.054908720380446 -5.432473995795152 2.3881438769701404 1.1977728912679066 1.0161896423517804 0.3766124123161455 0.09824327406585212 0.30319674920853656 3.3936056613318444 0.02923548740656887 0.04705044180416461 3.694247637036371e-06 5.432473995795152 -0.1815832489161262 SRS(ph)RS(ph)PPPVSK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSRSPPPVSK 11 2 Q01130-2;Q01130 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 2 S(0.445)RS(0.587)RS(0.968)PPPVSK;S(0.441)RS(0.605)RS(0.952)PPPVS(0.001)K 53.169 0.053052999999999996 2102090000.0 2543100.0 2537000.0 1739970.0 2760300.0 2720700.0 3448800.0 2760300.0 3274400.0 4912500.0 2086310.0 True False 2402029.1734558363 2415118.7118853657 1852131.2502504329 3022638.082085544 2934803.61133456 3427274.759932592 3039338.0619319417 3263041.870650708 4020513.834047342 2067826.9165246198 1.161620034182023 1.1679501280234985 0.8956896902006165 1.4617461732076045 1.419269469742207 1.6574282559842026 1.4698222746032017 1.5780053178410487 1.944318357556051 1.0 20.979684002016718 -5.394350396151581 5.216759958001008 1.5370565837731385 1.0865030923992791 0.41562769068414784 0.23216117315099963 0.2062483759648597 7.872913570629558 0.06366325346560324 0.09532878686489175 4.0331985636252625e-06 5.394350396151581 -0.45055349137385936 SRS(ph)S(ph)S(ph)PVTELASR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSSSPVTELASR 13 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 S(0.321)RS(0.784)S(0.895)S(0.927)PVT(0.073)ELASR 125.33 0.00071183 828840000.0 556030.0 473180.0 452940.0 458720.0 456830.0 464130.0 475270.0 501270.0 539420.0 436900.0 True False 525185.9074816754 450447.7225423405 482137.2371296238 502316.610880803 492779.9219928572 461233.1925097186 523314.92978820886 499531.21136729786 441474.9256716176 433029.4059030563 1.2128181142489212 1.040224327497943 1.1134053035593647 1.1600057733567828 1.1379825833425672 1.0651313426344453 1.2084974430243776 1.153573416857352 1.019503340081371 1.0 18.724105472391205 -7.803503630573217 6.58973902805035 1.0061774640375614 1.133336892703409 0.48708462618881276 0.05195459524370136 0.17801623562350352 19.23896880680783 0.04780373497084499 0.012811407709748339 1.5721586496274166e-08 7.803503630573217 0.12715942866584773 SRS(ph)S(ph)S(ph)VGSSSSYPISPAVSR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSSSVGSSSSYPISPAVSR 20 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 3 S(0.023)RS(0.964)S(0.972)S(0.995)VGS(0.004)S(0.004)S(0.022)S(0.015)YPISPAVSR;S(0.177)RS(0.826)S(0.994)S(0.846)VGS(0.123)S(0.027)S(0.006)S(0.001)YPISPAVSR 184.97 9.2314e-13 1545610000.0 1557010.0 1395800.0 1180450.0 1313270.0 1248100.0 1303110.0 1231250.0 1325000.0 1556920.0 1260490.0 True False 1470639.5514775172 1328743.6728614848 1256543.6957867793 1438082.7859509771 1346318.369282413 1294976.8071258904 1355716.7658420124 1320403.8842573233 1274222.5747592866 1249323.03924638 1.1771491482016054 1.0635709349144902 1.005779655312172 1.1510896227595877 1.0776383105001752 1.0365428047393168 1.0851611018554588 1.0568954888191455 1.0199304221011776 1.0 20.25271513422868 -1.0000000020362882 0.07085239102355927 0.9208416286280042 1.4161406938836638 0.3542299049904347 0.04484298604628959 320.1830814862248 1.6771952112492083 2.0228271193054277 15.78904962956556 0.0999999995311273 1.0000000020362882 0.4952990652556596 SRS(ph)SDIVSSVR ddPTM_KYSE-520_SHP099_60min_R1 8 SRSSDIVSSVR 11 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.003)RS(0.574)S(0.422)DIVSSVR;S(0.001)RS(0.964)S(0.036)DIVSSVR;S(0.005)RS(0.967)S(0.028)DIVSS(0.001)VR;S(0.014)RS(0.959)S(0.027)DIVS(0.001)SVR;S(0.03)RS(0.475)S(0.475)DIVS(0.021)SVR;SRS(0.689)S(0.3)DIVS(0.011)SVR;S(0.002)RS(0.966)S(0.032)DIVSSVR;SRS(0.5)S(0.5)DIVSSVR 218.07 1.4108e-09 26566550000.0 19890240.0 15279240.0 13672530.0 12674970.0 13835730.0 13756600.0 13746860.0 13844690.0 17637100.0 13791560.0 True False 18786888.736989565 14545202.375793178 14553883.160621466 13879595.337931301 14924523.236464838 13670739.956648313 15136526.765224703 13796666.001764944 14434647.235109702 13669377.508071331 1.3743777817165783 1.064072037457792 1.064707090869929 1.0153787419899585 1.091821718117916 1.000099671589008 1.1073310950909847 1.0093119451575943 1.0559842411687368 1.0 23.70444420953541 -4.258035568604569 4.452833209337625 1.0458559668845788 1.3978100754190894 0.8840448076305054 0.035801393455945595 0.0572374133261492 2.837695357570243 0.008149985797043388 0.06373818247894472 5.520322261342581e-05 4.258035568604569 0.3519541085345106 SRS(ph)SPATADKR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSSPATADKR 11 2 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.003)RS(0.589)S(0.407)PAT(0.001)ADKR;S(0.017)RS(0.489)S(0.489)PAT(0.005)ADKR 133.47 9.404e-05 622350000.0 213466.0 184819.0 162007.0 130036.0 171756.0 149614.0 163180.0 155706.0 210134.0 176229.0 True False 201624.61544607903 175940.01782102537 172450.2304403652 142394.58234325115 185272.22004203996 148680.2035295045 179675.82688332922 155165.89222805377 171978.9626470648 174667.74816408727 1.1543322540384948 1.0072839414849666 0.9873043664498447 0.8152311107227541 1.0607122493386163 0.8512172687417404 1.028672028877004 0.888348844357271 0.9846062851025218 1.0 17.414253718299765 -4.263183821155207 1.8150626686231826 0.9456674852629414 1.2213834023497958 0.40501371715584866 0.07421774993072443 0.786854683787579 2.6439099800069763 0.01858956283965949 0.3715257790760729 5.455269103968476e-05 4.263183821155207 0.2757159170868544 SRS(ph)SSVGSS(ph)SSYPISPAVSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSSSVGSSSSYPISPAVSR 20 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 S(0.046)RS(0.725)S(0.21)S(0.03)VGS(0.313)S(0.449)S(0.13)S(0.097)YPISPAVSR 217.22 9.154399999999999e-17 0.0 524450.0 515040.0 438650.0 418220.0 427000.0 444130.0 391960.0 413590.0 541850.0 406580.0 True False 495357.71303484443 490296.70530919934 466926.0808648147 457967.5030575721 460602.4707023406 441358.01992834115 431583.1419609622 412155.3528226314 443463.6989269326 402978.01751445304 1.229242518215223 1.2166835013317185 1.158688713952165 1.136457779712877 1.1429965176346644 1.0952409331174289 1.0709843296737227 1.0227737864332742 1.100466228064233 1.0 18.62034161619782 -2.9542683317122065 0.19329220906366934 0.9874421741547278 1.6329237680899134 0.8951601683565794 0.0230683244289927 7.3247717527023015 0.16629836946320137 0.04920374187614989 1.2268898559891317 0.001111045048652207 2.9542683317122065 0.6454815939351856 SRS(ph)TTELDDYSTNK ddPTM_KYSE-520_SHP099_60min_R1 6 SRSTTELDDYSTNK 14 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.052)RS(0.275)T(0.275)T(0.275)ELDDY(0.017)S(0.094)T(0.013)NK;S(0.001)RS(0.977)T(0.023)TELDDYSTNK;S(0.003)RS(0.918)T(0.078)TELDDYSTNK;S(0.042)RS(0.951)T(0.007)TELDDYSTNK;S(0.005)RS(0.993)T(0.002)TELDDYSTNK;S(0.008)RS(0.976)T(0.016)TELDDYSTNK 284.53 1.8730999999999998e-32 13574160000.0 13793580.0 11065660.0 10006960.0 9626880.0 10640560.0 10822190.0 10663290.0 10657660.0 14522280.0 10878180.0 True False 13028422.620579991 10534049.083705718 10652024.65330211 10541815.78077298 11477911.535495294 10754644.697922457 11741239.416881584 10620691.064976553 11885400.028887337 10781807.788295977 1.2083708851425448 0.9770206713516809 0.9879627667695254 0.9777410233761061 1.0645628043893494 0.9974806552939103 1.0889861558863165 0.985056613280166 1.1023568832111204 1.0 23.36209575960697 SRS(ph)VS(ph)PCSNVESR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSVSPCSNVESR 13 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.24)RS(0.735)VS(0.582)PCS(0.43)NVES(0.013)R 104.78 0.0059963 193850000.0 338420.0 340880.0 338530.0 273590.0 281410.0 297460.0 288240.0 293040.0 415230.0 337450.0 True False 319647.1679764554 324503.6131286886 360352.18546715105 299591.91134216706 303555.36599612504 295603.4418028155 317378.1121513106 292023.5126360504 339834.69909648475 334460.4555321277 0.9557098984030734 0.970230135614694 1.0774134266301514 0.8957468854292964 0.9075971792036444 0.8838217998971191 0.9489256708879409 0.8731182051744802 1.016068397550337 1.0 18.351476120340287 -5.290821516048251 24.974162170495358 0.9245540514962609 0.998029096536561 0.24793056984068473 0.053803967784131136 839.0231450716403 713149.2623935717 0.01460463936377046 0.02166583482746684 5.118921669374489e-06 5.290821516048251 0.07347504504030011 SRS(ph)VSPCS(ph)NVESR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSVSPCSNVESR 13 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.009)RS(0.977)VS(0.434)PCS(0.575)NVES(0.006)R 111.58 0.00050408 709620000.0 710700.0 834970.0 753440.0 764550.0 731650.0 703380.0 649780.0 738950.0 955290.0 674330.0 True False 671276.0542546752 794856.787884478 802007.9479466232 837212.6021296615 789226.6924809541 698989.9445144361 715466.1036416822 736386.7549222271 781833.4169011894 668355.9608208016 1.0043690691862575 1.189271637389636 1.199971265254648 1.2526447749511933 1.1808478396926578 1.045834832767876 1.0704866053158637 1.1017882656689073 1.1697859564849653 1.0 19.350257149190476 -6.248703559872777 23.90991747895394 1.083497616188034 1.1735112003171908 0.26461494802246843 0.07225883221232429 615.4397715332341 1155411.880490528 0.0244758212972186 0.02430827190280029 5.640225141711652e-07 6.248703559872777 0.09001358412915672 SRS(ph)WEDS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 3 SRSWEDSPER 10 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;B1AN86;A0A3B3IU26 Q9UDY2-7 TJP2 Tight junction protein ZO-2 2 S(0.034)RS(0.967)WEDS(1)PER;S(0.043)RS(0.957)WEDS(1)PER;S(0.018)RS(0.982)WEDS(1)PER 139.61 0.00081444 3094780000.0 4492900.0 3938600.0 3609460.0 3551380.0 3707860.0 3505210.0 3332750.0 3554300.0 4432800.0 3477440.0 True False 4243669.880625895 3749383.7440408706 3842131.56694019 3888902.0874386705 3999647.4871624764 3483332.6841983674 3669656.894505553 3541970.9628798603 3627915.261794421 3446632.5870073787 1.2312510177682046 1.0878396955262246 1.1147493879747166 1.128319305660399 1.160450783828765 1.0106481025361784 1.0647078857023806 1.0276613109943527 1.0525970407958236 1.0 21.716756084114643 -6.260545831395876 24.999999238667186 1.0349507616338216 1.1388188332528064 0.6750428340637815 0.03919476013664238 52.51709083963094 1469364.879151522 0.01295987697434858 0.012254045381320619 5.488506319654236e-07 6.260545831395876 0.10386807161898481 SRS(ph)WEDSPER ddPTM_KYSE-520_SHP099_60min_R1 8 SRSWEDSPER 10 1 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;B1AN86;A0A3B3IU26 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(0.009)RS(0.988)WEDS(0.002)PER;S(0.233)RS(0.766)WEDSPER;S(0.05)RS(0.846)WEDS(0.104)PER;S(0.121)RS(0.879)WEDSPER;S(0.041)RS(0.953)WEDS(0.006)PER;S(0.006)RS(0.932)WEDS(0.062)PER;S(0.001)RS(0.806)WEDS(0.193)PER;S(0.017)RS(0.973)WEDS(0.01)PER 154.67 9.9042e-05 4701190000.0 5578350.0 5485930.0 5002550.0 5310670.0 5569720.0 5418490.0 5402630.0 5604680.0 6897050.0 5828400.0 True False 5268907.805334972 5222377.6882511955 5325022.377363006 5815394.480088844 6008025.2766281925 5384671.194023191 5948780.564987635 5585238.673222149 5644719.580481676 5776764.910426582 0.9120862432578881 0.9040315417415093 0.9218000835990021 1.0066870593249413 1.0400328505292304 0.9321257273780184 1.02977716026674 0.9668454160461429 0.9771419934872934 1.0 22.461830353691866 -5.191508589067425 5.1444240078824786 0.9927307301559041 0.9099048824711529 0.615632485257148 0.02923711924896999 0.14259111810041158 7.201143332967863 0.007886578052322433 0.013879429551619572 6.434153400035719e-06 5.191508589067425 -0.08282584768475121 SRS(ph)WPASPR ddPTM_KYSE-520_SHP099_60min_R1 6 SRSWPASPR 9 1 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 S(0.001)RS(0.999)WPASPR;S(0.024)RS(0.976)WPASPR;S(0.015)RS(0.805)WPAS(0.18)PR;S(0.001)RS(0.999)WPASPR;S(0.002)RS(0.998)WPASPR;SRS(1)WPASPR 144.28 0.00023556 6268130000.0 3312330.0 2581830.0 2888880.0 2049758.0 3327550.0 3250520.0 2291221.0 2591840.0 3013110.0 3099746.0 True False 3128588.4519338473 2457795.01139416 3075101.8271714253 2244566.3840377866 3589409.2538303793 3230232.2989608306 2522839.9788420675 2582849.5119800037 2466005.1783219147 3072284.6620058925 1.0183263584342455 0.7999893505276517 1.0009169609835873 0.7305854212650695 1.1683192310333823 1.0514104825338073 0.8211608807091811 0.8406934239920538 0.8026616832803057 1.0 21.55088046423672 -6.787509966017723 24.9616926102011 0.8528534227158208 0.9549297972056092 0.11512768320531785 0.12674308780330967 489.3889626889522 468568.3663922138 0.05332565974590431 0.03596479561134877 1.6311354781475934e-07 6.787509966017723 0.10207637448978846 SRS(ph)Y(ph)S(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSYSPR 7 1 Q8IYB3;P62995;P62995-3;H7C2L4;H7BXF3;Q13595;Q13595-3;Q13595-4;J3KTL2;Q07955;J3KSR8 Q8IYB3;P62995;Q13595;J3KTL2 SRRM1;TRA2B;TRA2A;SRSF1 Serine/arginine repetitive matrix protein 1;Transformer-2 protein homolog beta;Transformer-2 protein homolog alpha;Serine/arginine-rich splicing factor 1 3 S(0.44)RS(0.677)Y(0.887)S(0.996)PR 46.818999999999996 0.056541999999999995 0.0 1087200.0 977440.0 943120.0 909230.0 937080.0 944360.0 871040.0 954430.0 1112200.0 917340.0 True False 1026890.8487205318 930482.3152326499 1003915.0242453531 995642.9458300329 1010822.8647441432 938465.8989474443 959093.223731187 951119.3050956374 910252.5162803981 909213.0812797216 1.1294281504124184 1.0233930135749827 1.1041581395115192 1.0950600759380418 1.1117557430227527 1.0321737756198461 1.0548607839883462 1.0460906521020712 1.001143224863432 1.0 19.794258915479528 -7.171310530750266 0.8037429029548753 0.9991812542245346 1.088583734734826 0.5490107249147923 0.03009002006107022 0.510463374303732 0.610159266257555 0.026826687596436798 0.012525391663064205 6.740458967106035e-08 7.171310530750266 0.08940248051029132 SRS(ph)YS(ph)PAHNR ddPTM_KYSE-520_SHP099_60min_R1 4 SRSYSPAHNR 10 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 S(0.394)RS(0.599)Y(0.191)S(0.817)PAHNR;S(0.346)RS(0.651)Y(0.01)S(0.993)PAHNR;S(0.371)RS(0.624)Y(0.008)S(0.997)PAHNR;S(0.391)RS(0.591)Y(0.188)S(0.829)PAHNR 97.223 0.0035417 378120000.0 417158.0 451159.0 388034.0 524750.0 414308.0 420396.0 404236.0 432959.0 598710.0 394787.0 True False 394017.4141561439 429484.6444365351 413047.2925163515 574622.082228159 446911.68250994175 417772.1526260218 445100.1198431771 431457.16628239054 489999.3562508879 391289.4943196382 1.0069716153285662 1.0976135333848138 1.05560537278044 1.4685343986229267 1.1421509879456837 1.0676804736412124 1.1375212631688543 1.1026546139006228 1.2522681118819285 1.0 18.577876850465387 -11.091566333660067 2.2557421961055946 0.7603172355923662 1.1489635816361807 0.11377686382064922 0.12379032457189623 12713515.147421064 2969454.075494461 15678748.676622134 0.03158157123691091 8.099042283542926e-12 11.091566333660067 0.38864634604381454 SRSDIDVNAAAS(ph)AK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSDIDVNAAASAK 14 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 SRS(0.011)DIDVNAAAS(0.989)AK;S(0.024)RS(0.305)DIDVNAAAS(0.672)AK 140.6 9.0992e-06 912190000.0 2012890.0 1735290.0 1783480.0 1616630.0 1711660.0 1707920.0 1651690.0 1722220.0 2129330.0 1716010.0 True False 1901230.9791032684 1651924.0636766062 1898445.9744688945 1770274.0291424682 1846357.9039868081 1697260.237759244 1818658.944140986 1716246.0207891709 1742697.3480411274 1700807.4864355794 1.117840199003193 0.9712586973253396 1.1162027387635214 1.040843271952237 1.0855772441690401 0.997914373787377 1.0692914739882706 1.0090771792085338 1.0246293962953665 1.0 20.69778842162316 -7.205101267650476 0.5884368980589807 1.0008507320014062 1.0627485933356466 0.19120158813839871 0.044043854299713046 1.3758632519178584 0.9980786141186925 0.03979600856686147 0.02345835645654982 6.235894115816181e-08 7.205101267650476 0.06189786133424047 SRSDVDMDPS(ph)SATAVLGPAR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSDVDMDPSSATAVLGPAR 20 1 M0QYC1;M0QZR4;M0QZH8;M0QYS3 M0QYC1 ARHGEF1 1 SRS(0.051)DVDMDPS(0.923)S(0.026)AT(0.001)AVLGPAR 203.26 1.2908e-12 0.0 210440.0 196590.0 144950.0 183360.0 223130.0 150950.0 159680.0 187570.0 244030.0 186920.0 True False 198766.47369826038 187145.52131239403 154293.70892819998 200786.47927080558 240689.06156396546 150007.86505794042 175822.01272662103 186919.36344916708 199720.3034956893 185264.03422155933 1.072882141066589 1.0101557061452338 0.8328314212551283 1.0837855286616656 1.2991677665624117 0.8096977143364175 0.9490347841413921 1.0089349734532291 1.0780306298244675 1.0 17.499223308924424 -1.000082541451416 0.10818508017494541 1.000649735853757 1.051858010516479 0.0007340292444070196 0.13139529236419537 3730.995523478432 28.317222608855626 1.3686785751410093 28.486753848366522 0.09998099593444287 1.000082541451416 0.05120827466272204 SRSES(ph)DVSSVEQDSFIEPYATTSQLRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSESDVSSVEQDSFIEPYATTSQLRPR 28 2 A0A0C4DGP8;K7EJF0;Q96ST8-3;Q96ST8;K7EQI2 A0A0C4DGP8 CEP89 Centrosomal protein of 89 kDa 1 SRS(0.001)ES(0.513)DVS(0.24)S(0.24)VEQDS(0.006)FIEPYATTSQLRPR 164.85 3.49e-10 696020000.0 78941.0 74467.0 67076.0 93916.0 75568.0 76611.0 78806.0 109260.0 113770.0 84894.0 True False 74561.98536501786 70889.49354275418 71399.82628539455 102841.74840312505 81514.77167689566 76132.84233159256 86772.47955244314 108881.00256147573 93112.23590830881 84141.90520653251 0.8861456747621766 0.842499267977718 0.8485644116345882 1.2222417373446963 0.9687773467550045 0.9048148142678596 1.0312635462609705 1.2940163678754277 1.1066095506128364 1.0 16.36053686465042 -4.937849479529661 0.5186682715732517 1.1106276264099775 0.7531067598142326 0.3158070196912829 0.1220771066739406 2.875217029667416 0.9669939386994066 0.08899578937341868 0.578531301836758 1.1538530980779924e-05 4.937849479529661 -0.3575208665957449 SRSES(ph)ET(ph)STMAAK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSESETSTMAAK 13 1 Q96B23;A0A087WVF1;Q96B23-2 Q96B23 C18orf25 Uncharacterized protein C18orf25 2 S(0.019)RS(0.055)ES(0.971)ET(0.943)S(0.006)T(0.006)MAAK 90.853 0.010121999999999999 430850000.0 921320.0 887310.0 826640.0 860910.0 882900.0 888320.0 864100.0 893390.0 1046600.0 867610.0 True False 870212.5429941136 844682.2957205365 879926.5370707639 942730.6275579709 952379.2069861739 882775.6653744275 951451.6608033159 890291.0386087925 856563.8226389724 859923.650390366 1.0119648908354562 0.9822759210507693 1.023261235658907 1.0962957317548068 1.107516006280136 1.0265744696912193 1.1064373684470714 1.0353140516656811 0.9960928766758905 1.0 19.71384904809698 -5.015669386240677 8.74131474463181 1.0577229014332663 0.9984175802918849 0.24011438952707476 0.039226605089146216 0.2565549975338148 127.54065125395267 0.010641218277822523 0.01975846639726821 9.645630335449415e-06 5.015669386240677 -0.05930532114138143 SRSES(ph)ETSTMAAK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSESETSTMAAK 13 1 Q96B23;A0A087WVF1;Q96B23-2 Q96B23 C18orf25 Uncharacterized protein C18orf25 1 S(0.41)RS(0.104)ES(0.485)ET(0.001)STMAAK 111.81 0.00088344 863840000.0 1470400.0 1371100.0 1398500.0 1551400.0 1368300.0 1427100.0 1299700.0 1504700.0 1598000.0 1380800.0 True False 1388833.9808302715 1305230.2979369427 1488649.547679114 1698844.5895545797 1475977.4254379682 1418192.9395441348 1431086.3598496346 1499480.5468996214 1307843.4823018136 1368567.1862461453 1.0148087684607696 0.9537202930585162 1.0877431248094904 1.2413307922531411 1.0784837165988463 1.0362611012427592 1.0456822100016687 1.0956572406302971 0.9556297238786711 1.0 20.384234831125944 -7.762692798258641 24.999508174635448 0.9778148344770925 1.0701427687053473 0.21189873641999601 0.07048572381782539 57.780986068950384 1152220.5601159108 0.06263744409589234 0.019603571689331998 1.7270591093571275e-08 7.762692798258641 0.0923279342282548 SRSEYLNR ddPTM_KYSE-520_SHP099_60min_R1 4 SRSEYLNR 8 1 P46087-2;P46087;P46087-4;P46087-3;F5GYR3 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 0 ;;; 126.24 0.00094619 641320000.0 876340.0 852870.0 478741.0 458999.0 811800.0 964780.0 654420.0 587216.0 633140.0 1359860.0 False True 827727.6732595214 811896.8450160299 509601.41087268334 502622.1269569187 875684.041489835 958758.450153031 720575.1601237189 585179.0847532448 518177.7361605566 1347812.6983550698 0.6141266321868882 0.6023810622996093 0.37809512515694754 0.3729168953299972 0.6497075168964935 0.7113439807498046 0.5346255907836012 0.4341694402103669 0.3844582684173874 1.0 20.362188592602692 -10.687055292445198 2.87224478253803 1.0603622427397341 0.5214327392002107 0.6022589864158352 0.11696967956727282 59269445.365334384 55456515.98565487 26088972.632484112 0.03285318486997854 2.0556288657829933e-11 10.687055292445198 -0.5389295035395234 SRSPGS(ph)PVGEGTGSPPK ddPTM_KYSE-520_SHP099_60min_R1 3 SRSPGSPVGEGTGSPPK 17 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5;A0A0A0MSR2 P35611 ADD1 Alpha-adducin 1 S(0.021)RS(0.013)PGS(0.966)PVGEGTGSPPK;S(0.006)RS(0.017)PGS(0.975)PVGEGTGS(0.001)PPK;S(0.067)RS(0.203)PGS(0.73)PVGEGTGSPPK 220.03 5.7408e-18 4704500000.0 3186000.0 2902120.0 2395930.0 2200980.0 2416720.0 2594480.0 2199090.0 2671120.0 3398700.0 2491090.0 True False 3009266.2288664607 2762697.7990290723 2550375.481423541 2410160.4774512346 2606902.1147441682 2578286.8879465084 2421395.478250156 2661854.508164094 2781581.7542548017 2469020.880638693 1.218809550159825 1.1189446880313179 1.0329501469277989 0.9761604271357024 1.055844499002296 1.0442547927255885 0.9807108142494863 1.0781012542411217 1.1265930458778681 1.0 21.23550760680386 -4.457409482111689 2.46055919713372 1.0363837465282346 1.2264268912481975 0.6368162772325368 0.043149369362765665 0.2397043776461156 2.3588083784938174 0.01193944203553325 0.07941645206778564 3.48811277598845e-05 4.457409482111689 0.19004314471996286 SRSPS(ph)TESQLMSK ddPTM_KYSE-520_SHP099_60min_R1 4 SRSPSTESQLMSK 13 1 P35612;P35612-4;P35612-3;A0A1C7CYY0;P35612-5;P35612-6 P35612 ADD2 Beta-adducin 1 S(0.023)RS(0.478)PS(0.494)T(0.004)ES(0.001)QLMSK;S(0.017)RS(0.272)PS(0.696)T(0.007)ES(0.007)QLMSK;S(0.005)RS(0.044)PS(0.853)T(0.097)ES(0.001)QLMSK;S(0.007)RS(0.044)PS(0.68)T(0.267)ES(0.002)QLMSK 162.14 1.617e-06 4861330000.0 2307120.0 2222780.0 1969630.0 1880900.0 1998920.0 1994900.0 1868110.0 2020760.0 2335310.0 1888790.0 True False 2179139.454470303 2115994.312339202 2096595.5013194275 2059660.1704867966 2156223.631700988 1982449.0891294158 2056956.7897966427 2013750.4552089314 1911276.5723743716 1872056.7900563835 1.1640349085802417 1.1303045524999653 1.1199422541323019 1.1002124408975664 1.1517939216128406 1.0589684563307011 1.098768371089154 1.0756887643073478 1.0209501028634964 1.0 20.836192769998693 -7.207596137612696 0.3480642223313301 0.9887944896313458 1.15508207659413 0.7946553660776032 0.02310387425845597 0.5758998446232674 0.21028390982386572 0.03189389244998983 0.03215398337060377 6.200173782935245e-08 7.207596137612696 0.16628758696278434 SRSPYSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SRSPYSSR 8 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YCQ1 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 S(0.003)RS(0.193)PY(0.001)S(0.274)S(0.53)R 61.56 0.051616999999999996 599920000.0 1118600.0 907380.0 859220.0 919130.0 959430.0 955200.0 849650.0 879560.0 1190000.0 1030600.0 True False 1056549.0281261825 863788.1027948535 914606.696000608 1006483.8388534877 1034931.6825900374 949238.2424865515 935540.9137849053 876509.0116508474 973925.9974587965 1021469.6857946668 1.0343420297433743 0.8456326358063748 0.8953831021319804 0.9853291319854288 1.0131790468014699 0.9292867479939733 0.9158773155926679 0.8580861711710561 0.953455605196073 1.0 19.962214959100017 -4.218118281879841 23.34359665991187 0.9308072186997238 1.0343428048227419 0.24069871323508119 0.05392725752463948 22608.752615790967 12182107.757279154 0.014098807369284061 6.143623459371306 6.051760301379088e-05 4.218118281879841 0.10353558612301805 SRSS(ph)DIVSSVR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSSDIVSSVR 11 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 S(0.003)RS(0.178)S(0.819)DIVSSVR;S(0.002)RS(0.164)S(0.832)DIVS(0.002)SVR 237.27 5.7765e-14 9321500000.0 5846300.0 4858200.0 4706380.0 4268860.0 4233500.0 4487000.0 4241200.0 4278300.0 5829800.0 4324900.0 True False 5521994.084689888 4624804.779693131 5009760.785274244 4674571.170920445 4566652.364679997 4458994.96863186 4669941.886123158 4263459.575862731 4771255.277298566 4286584.750721288 1.2882036413162536 1.0789019810969402 1.1687068089418435 1.0905117810009173 1.0653358396592025 1.0402208816427954 1.0894318338946556 0.9946052215916958 1.1130668247013487 1.0 22.03139723674939 -1.0000000000000002 0.5214136267921035 1.0479554349682145 8.849834197426766 0.6666863431023273 0.047022615667977385 69.54406683465932 0.6967128533444081 0.023108814701509387 600.2714498857752 0.09999999999999995 1.0000000000000002 7.801878762458552 SRSS(ph)PATADKR ddPTM_KYSE-520_SHP099_60min_R1 1 SRSSPATADKR 11 2 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.037)RS(0.166)S(0.773)PAT(0.025)ADKR 68.972 0.019534 383700000.0 122800.0 100010.0 77737.0 103860.0 101480.0 93273.0 82157.0 90729.0 109240.0 98634.0 True False 115988.03920426917 95205.36948192956 82748.05140359768 113730.82317335242 109465.89865778321 92690.84860913738 90462.23133505155 90414.28227530776 89404.76971630174 97760.17949609093 1.186454851066503 0.9738665576584429 0.8464392335419808 1.1633655314421767 1.1197391332752242 0.9481452375283715 0.9253484578418639 0.9248579814537176 0.9145315626172383 1.0 16.576959313620602 -6.394812251759321 7.248311104530542 0.9352659359088062 1.0471879204284753 0.26869838713487326 0.09417160767644472 0.40852174523770773 22.25401520370851 0.035140872507525636 0.030907644473212835 4.028911690736677e-07 6.394812251759321 0.11192198451966906 SRSS(ph)SVGS(ph)SSSYPISPAVSR ddPTM_KYSE-520_SHP099_60min_R1 3 SRSSSVGSSSSYPISPAVSR 20 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 SRS(0.068)S(0.897)S(0.068)VGS(0.632)S(0.196)S(0.133)S(0.005)YPISPAVSR;S(0.011)RS(0.087)S(0.895)S(0.05)VGS(0.537)S(0.362)S(0.034)S(0.024)YPISPAVSR;S(0.024)RS(0.143)S(0.46)S(0.459)VGS(0.531)S(0.194)S(0.149)S(0.031)Y(0.008)PISPAVSR 243.16 7.9932e-26 3248070000.0 2798320.0 2583900.0 2307870.0 2322940.0 2374280.0 2339890.0 2213510.0 2273790.0 3060410.0 2208080.0 True False 2643091.6112873796 2459765.5654870314 2456638.9929225594 2543711.5191826234 2561122.328194735 2325285.878571875 2437273.1925757956 2265902.7531965734 2504716.690657884 2188518.1290602456 1.207708346662099 1.123941142102058 1.1225125167125964 1.162298582500159 1.1702541067340788 1.0624933134871302 1.1136636979207324 1.035359370849515 1.1444806681740465 1.0 21.061522904225047 -6.262716159049195 24.999999983506804 1.0760633867705012 1.1538275749653588 0.4937091751775393 0.043404919040718075 107.0408727204568 2095911.3415961212 0.01410035798119 0.013094429794458774 5.461146675193521e-07 6.262716159049195 0.07776418819485764 SRST(ph)TELDDYSTNK ddPTM_KYSE-520_SHP099_60min_R1 1 SRSTTELDDYSTNK 14 1 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 S(0.001)RS(0.067)T(0.926)T(0.005)ELDDYSTNK 301.75 7.554999999999999e-33 1442100000.0 1195800.0 979690.0 868380.0 801380.0 886980.0 917870.0 870010.0 871040.0 1181300.0 814050.0 True False 1129466.5902318002 932624.2218553293 924357.1642571256 877542.914256318 956780.2797741481 912141.232863411 957959.1012793566 868018.5655422636 966805.6981496442 806838.1503213173 1.3998676063867315 1.1559000048323431 1.145653764499122 1.0876319047467489 1.1858391666198698 1.1305132665084783 1.1873002050012837 1.0758273703301977 1.198264729753571 1.0 19.621919776010543 -4.2522916027860225 3.6344907838099796 1.132782285389778 1.4324678995241493 0.6660040628974905 0.05759487070141708 0.16143598516614466 3.8617908684217825 0.013217532732766551 0.13302139522138523 5.5938188387352015e-05 4.2522916027860225 0.29968561413437134 SRSWPAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 SRSWPASPR 9 1 Q86YD1 Q86YD1 PTOV1 Prostate tumor-overexpressed gene 1 protein 1 S(0.005)RS(0.444)WPAS(0.551)PR;SRS(0.133)WPAS(0.867)PR 134.84 0.00092645 957640000.0 864040.0 842000.0 834710.0 762790.0 816760.0 784840.0 716490.0 781720.0 966990.0 769480.0 True False 816109.9787789634 801549.056132233 888516.7421832214 835285.3322588245 881034.3652712947 779941.5224383839 788919.8014685425 779008.3957748201 791408.9918341873 762663.0058463814 1.0700794092841412 1.0509871987860444 1.1650188030258148 1.0952220389028164 1.1552079470454295 1.0226555063764071 1.0344277818917178 1.0214319952628343 1.0376915961144653 1.0 19.54068619572813 -6.283945121261499 24.612102167599783 1.0252800135598241 1.1067096786332322 0.6110757440204588 0.0335101150026167 484.36101202516335 529691.2549596995 0.0120706819944811 0.010653523358496036 5.200617089212463e-07 6.283945121261499 0.0814296650734081 SRSWT(ph)S(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 SRSWTSPK 8 1 O75494;O75494-2 O75494 SRSF10 Serine/arginine-rich splicing factor 10 2 S(0.3)RS(0.3)WT(0.454)S(0.946)PK;S(0.227)RS(0.227)WT(0.668)S(0.878)PK 67.113 0.044376 3478100000.0 10828200.0 10085900.0 9505700.0 9407500.0 9725000.0 10247600.0 9432400.0 9838300.0 12658000.0 9787600.0 True False 10227538.16051845 9601358.224755457 10118452.631657748 10301585.971532002 10490302.172319112 10183640.927245786 10385919.04335285 9804173.233576471 10359626.282212988 9700889.478637576 1.0542887003341923 0.989739986822724 1.043043800667938 1.0619217953381723 1.0813752899071687 1.0497636273118338 1.070615129285184 1.0106468334853558 1.0679047838887374 1.0 23.209685604004033 -4.9833307480858275 24.8291341095333 1.0516941896587153 1.0206087152283922 0.1167397025583683 0.02838041315050723 371.401551734588 553201.3827964468 0.00703836021472573 0.014646080693470977 1.0391284894913354e-05 4.9833307480858275 -0.031085474430323057 SRT(ph)AS(ph)GSSVTSLDGTR ddPTM_KYSE-520_SHP099_60min_R1 3 SRTASGSSVTSLDGTR 16 1 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 2 S(0.008)RT(0.99)AS(0.558)GS(0.254)S(0.177)VT(0.013)S(0.001)LDGTR;S(0.159)RT(0.827)AS(0.453)GS(0.253)S(0.191)VT(0.111)S(0.006)LDGTR;S(0.017)RT(0.981)AS(0.834)GS(0.136)S(0.01)VT(0.01)S(0.011)LDGTR 164.2 1.5528e-06 817010000.0 1741720.0 1691640.0 1774330.0 1750500.0 1899370.0 1885800.0 1658120.0 1856650.0 2365800.0 2062700.0 True False 1645103.3195672587 1610371.0751965933 1888706.150828379 1916866.9936929822 2048839.6130630085 1874030.022698007 1825738.9512917418 1850209.714495368 1936230.3569647253 2044426.082756318 0.8046773289789534 0.7876885786085615 0.9238319579067414 0.9376064069328645 1.0021588113866853 0.9166533525004822 0.8930325076024564 0.9050020101489289 0.9470777022929966 1.0 20.963264471773346 -4.789965205120049 5.740428022084138 0.9374963357262046 0.7953059712954396 0.7373227844647863 0.034495368039156794 0.08187523374270544 7.680010084991214 0.009433623625639384 0.021375471367110196 1.6219400390243528e-05 4.789965205120049 -0.14219036443076505 SRT(ph)ASGS(ph)SVTSLDGTR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTASGSSVTSLDGTR 16 1 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 2 S(0.001)RT(0.968)AS(0.045)GS(0.601)S(0.359)VT(0.023)S(0.002)LDGTR 200.88 2.4454e-12 864930000.0 895480.0 866310.0 870770.0 953890.0 1034700.0 935620.0 852030.0 945310.0 1208300.0 1061500.0 True False 845805.9393048757 824691.1672421794 926901.2274812612 1044547.4188025148 1116125.0033623206 929780.4485293832 938161.5074114675 942030.9402470124 988903.1787642557 1052095.9358345035 0.8039247282463815 0.7838554823311329 0.881004474887606 0.9928252578734644 1.0608585827080783 0.8837411274589689 0.8917071870136394 0.8953850197128749 0.9399363167198964 1.0 20.00483483273973 -4.946891303429086 3.7637114219145524 0.946681224407119 0.7951580911618358 0.584918473250539 0.05302876759902889 0.17224028020618404 5.045868833530511 0.015841417137047904 0.0351784030438062 1.1300787188901166e-05 4.946891303429086 -0.15152313324528321 SRT(ph)GS(ph)ESSQTGTSTTSSR ddPTM_KYSE-520_SHP099_60min_R1 5 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.008)RT(0.993)GS(0.998)ES(0.002)SQTGTSTTSSR;S(0.399)RT(0.601)GS(0.846)ES(0.152)S(0.001)QTGTSTTSSR;S(0.139)RT(0.864)GS(0.809)ES(0.077)S(0.055)QT(0.044)GT(0.007)S(0.001)T(0.001)T(0.001)S(0.001)S(0.001)R;S(0.494)RT(0.591)GS(0.838)ES(0.066)S(0.011)QTGTSTTSSR;S(0.452)RT(0.57)GS(0.715)ES(0.216)S(0.046)QTGTSTTSSR 125.75 1.2364e-05 1833130000.0 625348.0 630217.0 558612.0 555619.0 594283.0 571304.0 609410.0 572944.0 750159.0 575690.0 True False 590658.699839668 599940.4293449973 594621.023330802 608424.8627070562 641049.6910922691 567738.279821542 671015.1100684508 570956.5909901349 613949.0355694903 570589.8344800428 1.0351721396822873 1.0514390427086746 1.0421163985030646 1.0663086265136341 1.1234860005461433 0.9950024439865821 1.1760025670277177 1.0006427673399163 1.0759901394474705 1.0 19.12209451880497 -5.26574428620527 20.117517742788593 1.066976320662663 1.0437621758349918 0.022052465128099108 0.05418800562543172 96.13571533687639 449284.1714738098 0.014209145322267509 0.02205575439585621 5.423201159994562e-06 5.26574428620527 -0.023214144827671257 SRT(ph)GSES(ph)SQTGTSTTSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 S(0.126)RT(0.873)GS(0.002)ES(0.558)S(0.431)QT(0.01)GTSTTSSR 111.01 0.00017065 478980000.0 186430.0 173130.0 161640.0 166430.0 176670.0 163960.0 169980.0 168490.0 209280.0 154660.0 True False 176088.35626100877 164812.57492657183 172059.5730331443 182247.457160996 190572.92388520463 162936.66482212627 187163.23724493384 167905.54751586166 171280.02751947654 153289.83272365938 1.1487282172096114 1.0751696443147987 1.1224460877540505 1.1889076654518862 1.2432195958407541 1.062931976159551 1.2209761986128536 1.0953469289678888 1.117360652537528 1.0 17.22590248476946 -8.283392972701856 1.2161524799361003 1.0005631112115603 1.1483593897082411 0.3819424832773334 0.05596503697086381 1.066651392886887 2.8062492664885297 0.05379816600612341 0.016480482290569455 5.207233197648397e-09 8.283392972701856 0.14779627849668087 SRT(ph)GSESSQTGTSTTSSR ddPTM_KYSE-520_SHP099_60min_R1 3 SRTGSESSQTGTSTTSSR 18 1 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.043)RT(0.957)GSESSQTGTSTTSSR;S(0.44)RT(0.542)GS(0.019)ESSQTGTSTTSSR;S(0.083)RT(0.835)GS(0.083)ESSQTGTSTTSSR 205.36 6.3734e-13 682910000.0 311946.0 357223.0 355797.0 380189.0 283324.0 261143.0 252818.0 216932.0 484866.0 236524.0 True False 294641.73353106575 340061.4708773452 378732.24391532777 416322.0482520093 305619.98690695496 259513.10967092277 278375.31070590473 216179.51352430967 396826.556877191 234428.58137288725 1.2568507295721 1.4505973157617498 1.6155549024668965 1.7759014102030433 1.3036805713584434 1.1070028584020457 1.1874631884715237 0.922155106934038 1.6927396589325854 1.0 17.83878894731643 -5.989254760534503 24.151903776766147 1.1804657650200494 1.527653076640138 0.33686681175929223 0.22710967856148764 164.43782992000763 369600.28942086844 0.06950859643628168 0.07872991646529119 1.0250504472555084e-06 5.989254760534503 0.34718731162008853 SRT(ph)PLDKDLINTGICESSGK ddPTM_KYSE-520_SHP099_60min_R1 2 SRTPLDKDLINTGICESSGK 20 2 O95714 O95714 HERC2 E3 ubiquitin-protein ligase HERC2 1 S(0.152)RT(0.846)PLDKDLINT(0.002)GICESSGK;S(0.244)RT(0.756)PLDKDLINTGICESSGK 90.712 0.00012568 359560000.0 645120.0 545470.0 488280.0 474930.0 451360.0 567860.0 435750.0 666990.0 675560.0 595630.0 True False 609333.9075851635 519264.8024328373 519755.3100756227 520067.204407089 486879.4641129001 564315.7751030282 479799.86251017766 664676.3673666363 552895.3334817351 590353.1815931279 1.0321514757332453 0.8795833047457263 0.8804141762614208 0.8809424944634582 0.8247257392583309 0.9558952042575003 0.8127335931609433 1.1258961382624206 0.9365501037695622 1.0 19.17121878634717 -7.255488666001943 24.99804689250183 1.023417341049726 0.893111497300141 0.38208926949993705 0.07314345780790589 454.91496869462276 1911038.1630381572 0.03352451506008499 0.018699874575250887 5.552791083242069e-08 7.255488666001943 -0.13030584374958498 SRT(ph)PLISR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTPLISR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.135)RT(0.865)PLISR 70.488 0.061146000000000006 282400000.0 52629.0 61052.0 54126.0 59094.0 50635.0 46881.0 44305.0 45681.0 71226.0 39108.0 True False 49709.56445668951 58118.97027907974 57615.04856466202 64710.275992741066 54619.68642625991 46588.39828937602 48783.78177513122 45522.54327302555 58293.15386134482 38761.5335455636 1.2824457628400245 1.499398113615958 1.4863975517618877 1.6694457126335083 1.4091208842925498 1.201923505802784 1.2585617057123557 1.1744257543245673 1.503891836292341 1.0 15.242338029631984 -6.110454327031871 4.577592591858508 1.241981702176144 1.4911727542828852 0.41391038033209715 0.14491325107568997 0.23424434877763986 7.870714141022431 0.04738548099111336 0.047819121164473094 7.75435488439238e-07 6.110454327031871 0.2491910521067413 SRT(ph)PPS(ph)APSQSR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.18)RT(0.661)PPS(0.741)APS(0.234)QS(0.184)R 83.633 0.019569 1368100000.0 264390.0 231930.0 210790.0 204850.0 274990.0 268330.0 237070.0 239750.0 273800.0 289900.0 True False 249723.75965160184 220787.73466597262 224377.86067592475 224318.88240960165 296630.1485209285 266655.25293804036 261035.34918023626 238918.36320807037 224084.82193631845 287331.71153878694 0.8691131177767394 0.7684071259783953 0.7809018345879165 0.7806965726416898 1.0323613322467764 0.9280397611178554 0.9084808209378555 0.8315071174307843 0.7798819724291699 1.0 18.132357700008384 -5.664227950349491 21.408476067215716 0.9056200134467743 0.7961798644128034 0.36415593729129003 0.07304210105528015 6.28649463702768 1374.5538831999895 0.022605482702843727 0.029183543255558764 2.166566629503792e-06 5.664227950349491 -0.10944014903397092 SRT(ph)PPSAPSQSR ddPTM_KYSE-520_SHP099_60min_R1 3 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SRT(0.915)PPSAPS(0.082)QS(0.003)R;S(0.001)RT(0.857)PPSAPS(0.138)QS(0.004)R;S(0.004)RT(0.973)PPS(0.018)APS(0.001)QS(0.004)R 104.09 0.0075447000000000005 1123810000.0 687960.0 644380.0 549980.0 472276.0 490088.0 623880.0 510980.0 576190.0 695570.0 598240.0 True False 649797.4873857399 613423.0175659009 585432.5907991132 517160.969045043 528655.1373807227 619986.1335034643 562634.8450842242 574191.3313737573 569272.0218927865 592940.0590236773 1.0958906848960128 1.0345447372470506 0.9873385713946773 0.872197722475674 0.8915827651300794 1.0456135052239859 0.948889919852349 0.9683800624285848 0.9600835923114015 1.0 19.177526742917795 -4.63961684503123 2.378535770124052 0.9539538003780508 1.0897924902689933 0.4773158807444188 0.04691014798199904 0.2846930597456209 2.986524699983693 0.013413477071388917 0.05714754456698887 2.2928896555188673e-05 4.63961684503123 0.1358386898909425 SRT(ph)PS(ph)ASNDDQQE ddPTM_KYSE-520_SHP099_60min_R1 3 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 S(0.098)RT(0.902)PS(0.717)AS(0.283)NDDQQE;S(0.382)RT(0.618)PS(0.799)AS(0.201)NDDQQE;S(0.025)RT(0.975)PS(0.852)AS(0.148)NDDQQE 138.05 2.2485999999999998e-05 405331000.0 506229.0 463975.0 489251.0 502707.0 510044.0 588648.0 647898.0 777015.0 874713.0 729642.0 True False 478147.46822750766 441684.94455932686 520788.9022892779 550484.1221356288 550181.5610466144 584974.0294841115 713393.8527151332 774319.7163216637 715887.1689203172 723177.9395328854 0.661175406617564 0.6107555560179555 0.720139365182607 0.7612014858904533 0.7607831087906073 0.808893631160759 0.9864707061942847 1.0707181096008151 0.9899184277976213 1.0 19.463991143600403 -6.459356878240438 0.9659567009053092 1.0416397621626874 0.6676993200482542 0.916408190865089 0.04432355440394689 0.15059436343316937 0.2921120546741569 0.030713130838928807 0.02312915655916499 3.472506935099778e-07 6.459356878240438 -0.3739404421144332 SRT(ph)PVQDHR ddPTM_KYSE-520_SHP099_60min_R1 4 SRTPVQDHR 9 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 S(0.033)RT(0.967)PVQDHR;S(0.016)RT(0.984)PVQDHR;SRT(1)PVQDHR;S(0.414)RT(0.586)PVQDHR 100.19 0.0104 3110907000.0 3603800.0 3182420.0 3082000.0 3281060.0 3324870.0 3047630.0 2954310.0 3307750.0 3863060.0 3108190.0 True False 3403890.0300028105 3029531.7662901897 3280670.6513743512 3592890.9559133374 3586518.353077495 3028608.610709055 3252960.4860870717 3296276.187284651 3161625.6838177987 3080653.8547352273 1.1049245356698356 0.9834054422029731 1.0649267350603773 1.1662754484379212 1.1642068606846923 0.9831057799803848 1.0559318376801712 1.0699923921079266 1.0262839750587722 1.0 21.55480515818914 -6.2747014687088125 24.906622656528885 1.0332416414786716 1.092545820352734 0.2907609906041163 0.05378802807463079 1321.1595355397912 2481173.109785618 0.020899758237567487 0.018539750826148945 5.312494963067227e-07 6.2747014687088125 0.059304178874062474 SRT(ph)S(ph)PAPWK ddPTM_KYSE-520_SHP099_60min_R1 1 SRTSPAPWK 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.48)RT(0.649)S(0.871)PAPWK 59.542 0.064874 1057300000.0 2655600.0 2346200.0 2088700.0 2355900.0 2399300.0 2377200.0 2447700.0 2611600.0 2580700.0 2360900.0 True False 2508288.5741926483 2233485.0302820047 2223340.944038159 2579804.027672835 2588111.2598504066 2362363.0130224335 2695137.4032499404 2602540.9691520245 2112109.9341528723 2339984.2627524044 1.0719254031402228 0.9544872014031709 0.9501520926567927 1.1024877682888101 1.1060378913857065 1.0095636328099515 1.1517758671076648 1.1122044752945424 0.9026171533600422 1.0 21.158067396515158 -5.261292095571846 24.999999922609508 1.0639017595867681 0.9884181293150126 0.12055206846494693 0.07480454630760455 23.838113361380017 4046102.060455435 0.02054754866577287 0.032850416485662295 5.479083315714793e-06 5.261292095571846 -0.07548363027175553 SRT(ph)S(ph)VQTEDDQLIAGQSAR ddPTM_KYSE-520_SHP099_60min_R1 4 SRTSVQTEDDQLIAGQSAR 19 1 P35221;G3XAM7;P35221-2;P35221-3;P26232;P26232-5;P26232-2;P26232-3;P26232-4;P26232-6;A0A0A0MRI5;A0A0A0MTJ6 P35221 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 2 S(0.458)RT(0.635)S(0.907)VQTEDDQLIAGQSAR;S(0.123)RT(0.905)S(0.963)VQT(0.009)EDDQLIAGQSAR;S(0.604)RT(0.721)S(0.668)VQT(0.007)EDDQLIAGQSAR;S(0.209)RT(0.669)S(0.699)VQT(0.423)EDDQLIAGQSAR 121.48 5.7649000000000005e-06 1874940000.0 1644490.0 1594160.0 1321180.0 1250170.0 1515470.0 1483270.0 1315900.0 1598820.0 2052030.0 1562350.0 True False 1553266.8614904578 1517574.1607170568 1406345.3767627422 1368985.780922684 1634728.867155213 1474012.3617389286 1448924.013946397 1593274.0665873936 1679433.0794667038 1548508.7944899076 1.003072676769729 0.9800229524798786 0.9081933417278426 0.8840671656460561 1.0556794207253481 0.9518915016717624 0.9356898837785971 1.028908632780631 1.0845486221600207 1.0 20.562448145898873 -7.371916808398036 5.142204427258528 1.0461945077731067 0.9592365383130821 0.34575472900688153 0.04919543048951849 0.25527678951886884 9.887504641206188 0.028958282717912603 0.013382460946599306 4.247009100530916e-08 7.371916808398036 -0.08695796946002465 SRT(ph)SPAPWK ddPTM_KYSE-520_SHP099_60min_R1 2 SRTSPAPWK 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.069)RT(0.466)S(0.466)PAPWK;S(0.002)RT(0.55)S(0.448)PAPWK 93.839 0.011369 7835200000.0 15742300.0 12109100.0 11901600.0 12829200.0 12758600.0 13511200.0 12817200.0 13426300.0 14969200.0 12558000.0 True False 14869043.237502975 11527360.659870343 12668796.1792333 14048483.310760362 13762629.233496182 13426871.589074822 14112887.659817444 13379727.299021978 12251170.622823717 12446745.889976153 1.1946129027569843 0.9261344902328065 1.0178400275236577 1.1286872436332254 1.1057210740182106 1.0787455378106499 1.1338616361713545 1.0749578578443697 0.9842870362357168 1.0 23.569265273811215 -7.755646604830565 20.772500211614727 0.9921434455597429 1.0790891725043354 0.217202763181929 0.06841214065565823 25.27916657823597 90679.01816825304 0.050327403952598354 0.017648450914053416 1.7553082545975625e-08 7.755646604830565 0.08694572694459257 SRT(ph)SPITR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTSPITR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.004)RT(0.785)S(0.149)PIT(0.062)R 93.477 0.012347 6112000000.0 3119100.0 2789900.0 2905700.0 2545400.0 2859400.0 2969200.0 2603700.0 2538200.0 3013500.0 2493000.0 True False 2946077.3052283 2655869.0162747265 3093006.071284384 2787314.050697583 3084418.51223951 2950668.121431183 2866907.4056632253 2529395.5766203315 2466324.364153015 2470913.9595246483 1.1923026675502142 1.074852892403287 1.2517659950730997 1.1280498213842312 1.2482905365239376 1.194160610108346 1.160261932477308 1.0236680103207374 0.9981425515227101 1.0 21.23661334432585 -7.266700364541229 3.34771495544407 1.001473453534374 1.1805599630453185 0.7224799133005474 0.04893595042196722 0.12939268139820018 3.053558110228724 0.028089039293440088 0.013231109666674892 5.41127537628564e-08 7.266700364541229 0.17908650951094462 SRT(ph)SPVTR ddPTM_KYSE-520_SHP099_60min_R1 2 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.004)RT(0.487)S(0.487)PVT(0.022)R;S(0.02)RT(0.478)S(0.478)PVT(0.025)R 90.82700000000001 0.013800999999999999 69433500000.0 16833500.0 13777900.0 14801800.0 13043100.0 13280700.0 13826900.0 12941200.0 13333100.0 16106400.0 13647200.0 True False 15899712.198249685 13115989.002950473 15755947.71171736 14282712.302449003 14325815.533153554 13740601.188271852 14249422.789940825 13286850.58806892 13181883.769302849 13526296.425360927 1.1754667869350222 0.9696659448005919 1.1648382688239762 1.05592187641769 1.0591085011484431 1.0158435654647577 1.0534607805299965 0.9822977532236347 0.9745375492871554 1.0 23.689263539727932 -6.444467561673133 0.6964024782255911 0.9825793017254626 1.0953704301396778 0.3754325555116089 0.05544443555871654 0.8002343286782994 0.82375326759536 0.04156309891877608 0.03547161775884341 3.5936223724005e-07 6.444467561673133 0.11279112841421524 SRT(ph)SVQT(ph)EDDQLIAGQSAR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTSVQTEDDQLIAGQSAR 19 1 P35221;G3XAM7;P35221-2;P35221-3;P26232;P26232-5;P26232-2;P26232-3;P26232-4;P26232-6;A0A0A0MRI5;A0A0A0MTJ6 P35221 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 2 S(0.063)RT(0.936)S(0.286)VQT(0.715)EDDQLIAGQSAR 186.62 1.4537e-12 491100000.0 694730.0 668070.0 597070.0 575540.0 587890.0 596100.0 597960.0 619740.0 840640.0 636870.0 True False 656191.9419900799 635974.9144064862 635558.0875457767 630239.1485575892 634153.5983634635 592379.5187879315 658407.6323272192 617590.2665884041 688000.966809886 631227.8272773616 1.039548501561464 1.0075204021812534 1.0068600592072954 0.9984337212698038 1.004635047695412 0.938455963424502 1.0430586293495498 0.9783951845916241 1.0899408059644655 1.0 19.267801281483568 -7.742293687635881 24.99252639720271 1.0449704859090718 1.0016562138664913 0.19915296720992626 0.034366759448824495 314.5092156151761 410558.84484571725 0.021974947051953287 0.008275418756919832 1.810115604667337e-08 7.742293687635881 -0.04331427204258054 SRTDEEGNAY(ph)GSEREEEDEEEDEEDGKR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTDEEGNAYGSEREEEDEEEDEEDGKR 28 3 P78415 P78415 IRX3 Iroquois-class homeodomain protein IRX-3 1 S(0.006)RT(0.006)DEEGNAY(0.83)GS(0.158)EREEEDEEEDEEDGKR 89.039 0.0040772 145340000.0 23019.0 14564.0 24167.0 13552.0 21328.0 24548.0 22118.0 17040.0 27296.0 17562.0 True False 21742.09018276116 13864.323578990326 25724.843488567178 14839.978005442625 23006.392260279874 24394.786826381733 24353.903290878054 16980.892217165903 22339.734476164154 17406.414343029257 1.2490849496219312 0.7965065811812396 1.4778944693379197 0.8525580118334704 1.321719212635728 1.4014825997837463 1.3991338371553275 0.9755537172976833 1.283419665642427 1.0 14.087331423302171 -4.755257366358588 24.99999014068957 1.2173475664792048 1.0227959364199979 0.10621792178560574 0.22164951227582336 320.02145857730517 1294128.3684447785 0.054629548339673414 0.13704082382598662 1.7568821630823835e-05 4.755257366358588 -0.19455163005920695 SRTDEEGNAYGS(ph)EREEEDEEEDEEDGKR ddPTM_KYSE-520_SHP099_60min_R1 1 SRTDEEGNAYGSEREEEDEEEDEEDGKR 28 3 P78415 P78415 IRX3 Iroquois-class homeodomain protein IRX-3 1 S(0.003)RT(0.003)DEEGNAYGS(0.994)EREEEDEEEDEEDGKR 154.28 3.1408e-07 124580000.0 25040.0 20385.0 20006.0 17854.0 25324.0 17984.0 24624.0 26432.0 22032.0 19439.0 True False 23650.981283997517 19405.674001491196 21295.618770731766 19550.838791999155 27316.85472615002 17871.755185173923 27113.234227081142 26340.31356127519 18031.54418152287 19266.78558331315 1.227552005586313 1.0072086969348086 1.1053021106528416 1.0147431551286905 1.4178210790807257 0.9275940248513765 1.4072526062969088 1.367135864328525 0.9358875201860285 1.0 14.233828276048714 SRTPPSAPSQS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SRTPPSAPSQSR 12 1 Q9UQ35;I3L3Q8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SRT(0.044)PPS(0.027)APS(0.043)QS(0.885)R 84.169 0.0070845 0.0 137260.0 135010.0 115540.0 85534.0 89241.0 121900.0 105810.0 116220.0 131290.0 122050.0 True False 129645.91417897354 128523.91694585851 122987.89327053625 93663.12564326513 96263.75898816755 121139.17688349087 116506.3074060858 115816.85994595193 107451.0455515676 120968.73195346314 1.0717307860088054 1.062455684790528 1.0166915969479609 0.774275501865205 0.7957738949036878 1.0014089998900981 0.963110925647348 0.957411539954861 0.8882547069510838 1.0 16.884274661728142 -5.017296901374939 22.60828306903082 0.9095914815820569 1.06021346915351 0.43956122940053 0.07322092407587834 197.8730265255923 258637.66316094706 0.021401810449675946 0.038327863092647484 9.609551057723111e-06 5.017296901374939 0.15062198757145295 SRTPS(ph)ASNDDQQE ddPTM_KYSE-520_SHP099_60min_R1 6 SRTPSASNDDQQE 13 1 O43765 O43765 SGTA Small glutamine-rich tetratricopeptide repeat-containing protein alpha 1 SRT(0.043)PS(0.924)AS(0.032)NDDQQE;SRT(0.001)PS(0.938)AS(0.062)NDDQQE;SRTPS(0.97)AS(0.03)NDDQQE;SRT(0.003)PS(0.691)AS(0.306)NDDQQE;S(0.002)RT(0.009)PS(0.967)AS(0.022)NDDQQE;S(0.002)RT(0.005)PS(0.974)AS(0.02)NDDQQE 197.75 2.1788e-08 2978880000.0 715495.0 751888.0 695566.0 583723.0 613119.0 1028770.0 922953.0 1211757.0 1409735.0 1226176.0 True False 675805.0660460781 715766.1718731024 740403.2973049498 639199.8584172812 661367.9771300885 1022349.0648271437 1016254.0963932435 1207553.6977932102 1153762.6605273755 1215313.0345904941 0.5560748933082859 0.5889562207438048 0.6092284672602335 0.5259549105656246 0.544195576206372 0.8412228255016037 0.836207682686194 0.9936153595193699 0.9493543043551258 1.0 20.212896533594826 -6.509655041444787 1.6966194208326992 0.9632861131270111 0.5626240574615513 0.934096198296954 0.04822937535375012 0.08703600197950087 0.5048262801968993 0.02321652204369608 0.017547080870648966 3.0927510182361883e-07 6.509655041444787 -0.40066205566545976 SRTS(ph)PAPWK ddPTM_KYSE-520_SHP099_60min_R1 3 SRTSPAPWK 9 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.001)RT(0.004)S(0.995)PAPWK;S(0.007)RT(0.05)S(0.943)PAPWK;S(0.113)RT(0.327)S(0.56)PAPWK 95.618 0.0029 7423210000.0 15993600.0 13042000.0 11808700.0 12965100.0 12480400.0 13926000.0 13041800.0 13488900.0 15353300.0 13036600.0 True False 15106403.125548832 12415442.743558886 12569907.696588036 14197299.205900537 13462536.47623766 13839082.668412583 14360192.419702204 13442110.154232943 12565527.745196773 12921105.866321336 1.1691261786596332 0.9608653370699133 0.9728198055672082 1.0987681203747102 1.0419028073539398 1.0710447551152675 1.111374875205676 1.0403219579888743 0.9724808290557101 1.0 23.623226214087225 -7.658725212191894 5.296739083606782 0.9870961887341265 1.0560363201223086 0.1966792511530513 0.05875510088195281 0.3565209206181479 14.967261352401183 0.04313354113889815 0.015241622073970854 2.194192810979654e-08 7.658725212191894 0.06894013138818211 SRTS(ph)PITR ddPTM_KYSE-520_SHP099_60min_R1 4 SRTSPITR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.004)RT(0.018)S(0.975)PIT(0.003)R;S(0.331)RT(0.208)S(0.458)PIT(0.003)R;S(0.025)RT(0.025)S(0.95)PIT(0.001)R;S(0.156)RT(0.156)S(0.688)PITR 65.842 0.018312000000000002 9294100000.0 254026.0 517182.0 936264.0 177542.0 258632.0 507190.0 224245.0 216155.0 205811.0 353146.0 True False 239934.67139172333 492335.8004139919 996617.0755153659 194415.5383000515 278984.8669852167 504024.4390774221 246913.87302029776 215405.20875595624 168440.91047310294 350017.4011834306 0.6854935514076994 1.4066037824101716 2.8473357957225605 0.5554453511246026 0.7970599919945451 1.4399982325829634 0.7054331361397079 0.6154128566970037 0.4812358182867302 1.0 18.41706712214296 SRTS(ph)PVSR ddPTM_KYSE-520_SHP099_60min_R1 3 SRTSPVSR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.001)RT(0.129)S(0.435)PVS(0.435)R;S(0.127)RT(0.127)S(0.745)PVSR;S(0.267)RT(0.267)S(0.466)PVSR 91.469 0.014733000000000001 8689420000.0 2450618.0 2118819.0 1986796.0 1990431.0 2088626.0 2109793.0 2050469.0 1889732.0 2385486.0 1989915.0 True False 2314677.3343541324 2017027.7548278403 2114868.049145997 2179600.963795096 2252988.983543667 2096624.9992990214 2257750.4171689763 1883176.9607587652 1952341.875608399 1972285.901230443 1.173601318607045 1.0226852778136701 1.072292839403558 1.1051141025929943 1.142323728085316 1.0630431409518302 1.1447378981720862 0.9548194608012531 0.9898878628044739 1.0 20.911437268296762 -7.267646045428879 24.997470746658497 0.9792652391746334 1.0991097699936054 0.6260028006875012 0.04305280336190531 331.69337526274364 1335891.3117200313 0.02224174092543649 0.011095348672158402 5.3995050857915723e-08 7.267646045428879 0.11984453081897206 SRTS(ph)PVTR ddPTM_KYSE-520_SHP099_60min_R1 3 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.081)RT(0.178)S(0.741)PVTR;S(0.134)RT(0.091)S(0.774)PVT(0.001)R;S(0.212)RT(0.127)S(0.658)PVT(0.002)R 89.266 0.0029788 6797430000.0 374959.0 351446.0 292944.0 297751.0 305899.0 286477.0 280963.0 311583.0 320225.0 249946.0 True False 354159.2768077652 334562.0066287994 311827.63896697265 326049.16551789775 329971.51097277564 284688.99077975255 309365.4819746347 310502.19129701896 262080.21221533063 247731.67289504525 1.4296083850279788 1.3505015435411885 1.258731414206703 1.3161383916219414 1.3319714314954485 1.1491828535803121 1.2487926083868226 1.2533810782788652 1.0579196804050337 1.0 17.918418805707567 -1.0000000000149263 0.050792129905676595 0.46644112064653265 2.7034660299282893 0.7866334987228054 0.05879677501242664 216.51841969083821 0.831372191745877 8.526815602219445 37.780081437972655 0.0999999999965631 1.0000000000149263 2.2370249092817565 SRTS(ph)VQTEDDQLIAGQSAR ddPTM_KYSE-520_SHP099_60min_R1 5 SRTSVQTEDDQLIAGQSAR 19 1 P35221;G3XAM7;P35221-2;P35221-3;P26232;P26232-5;P26232-2;P26232-3;P26232-4;P26232-6;A0A0A0MRI5;A0A0A0MTJ6 P35221 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 S(0.005)RT(0.338)S(0.658)VQTEDDQLIAGQSAR;S(0.001)RT(0.133)S(0.866)VQTEDDQLIAGQSAR;S(0.006)RT(0.101)S(0.893)VQTEDDQLIAGQSAR;SRT(0.001)S(0.678)VQT(0.322)EDDQLIAGQSAR;SRT(0.005)S(0.942)VQT(0.054)EDDQLIAGQSAR 262.44 6.481600000000001e-35 4416140000.0 3765340.0 4195820.0 3332300.0 3002590.0 3366590.0 3570510.0 3299470.0 3575530.0 4960280.0 3725550.0 True False 3556469.084180805 3994246.509145781 3547105.389868516 3287955.2508383994 3631521.479723164 3548225.1226765667 3633012.6273240517 3563127.320964973 4059618.1904831245 3692544.5254340437 0.9631485983944246 1.0817057131291528 0.9606127605060004 0.8904307661535682 0.9834739851366567 0.9609160020242375 0.9838778117095299 0.9649517551981697 1.099409407935557 1.0 21.816183886721983 -7.74067629320717 24.99870712409916 1.0497047283253207 0.974278960649165 0.2760849298703796 0.04925956903476664 277.8866293875497 334577.18506778555 0.03417758315536143 0.012886806096479044 1.816869384393487e-08 7.74067629320717 -0.07542576767615572 SRTS(ph)VTR ddPTM_KYSE-520_SHP099_60min_R1 2 SRTSVTR 7 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.007)RT(0.014)S(0.505)VT(0.474)R;S(0.019)RT(0.077)S(0.452)VT(0.452)R 66.60300000000001 0.05123 1005480000.0 1852910.0 1468230.0 1248160.0 1431510.0 1657110.0 1908060.0 1616690.0 1352410.0 1829240.0 2008690.0 True False 1750125.388615492 1397694.0269418408 1328618.3907266099 1567560.2800008254 1787515.1293338502 1896151.089781081 1780120.8025739063 1347718.8053648663 1497096.1273878412 1990894.5693371731 0.8790648262193813 0.7020432163854733 0.6673474382769278 0.7873647877409762 0.897845198266308 0.9524116038009813 0.8941311257715472 0.6769413238258826 0.7519715762177543 1.0 20.92498539243091 -5.54321665849543 7.974396953427377 0.8515130820707083 0.7418168249964617 0.20102052285215943 0.10126403480109933 0.3147585425490965 94.92779866604667 0.03181016721766917 0.041746285957463374 2.8627494605580973e-06 5.54321665849543 -0.10969625707424657 SRTSPIT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SRTSPITR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.012)RT(0.05)S(0.05)PIT(0.888)R 76.943 0.047664 14765000000.0 4656700.0 3945900.0 3845800.0 3894700.0 3867600.0 4213600.0 3688400.0 3894500.0 4607300.0 3716400.0 True False 4398383.568098698 3756333.041083352 4093706.4214975634 4264851.117015747 4171958.1163662076 4187301.3594444394 4061259.46731506 3880990.8884831327 3770730.460581441 3683475.5873154523 1.1940851687045595 1.0197795402849403 1.1113705858659133 1.1578334146430453 1.1326145694389589 1.1367799949221815 1.1025617982376639 1.0536219927309554 1.0236881910026667 1.0 21.81263625034281 -7.457317154071982 1.673351865471777 1.0056777539986177 1.1220387144639785 0.5462646572021002 0.041904632778785596 0.31223355183043233 1.552272918563787 0.036426829932692355 0.012344459463127714 3.4888544037631837e-08 7.457317154071982 0.11636096046536082 SRTSPVT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.02)RT(0.06)S(0.034)PVT(0.886)R 83.883 0.021125 1415900000.0 924360.0 871870.0 764950.0 707900.0 750690.0 895310.0 785500.0 753770.0 981360.0 788880.0 True False 873083.9081340232 829984.0564964487 814259.900963274 775178.603162104 809765.0321581719 889722.0381916183 864906.0057412377 751155.3478012398 803169.762072407 781891.1369393537 1.1166310332556473 1.061508459790644 1.0413980444267792 0.9914150020890052 1.035649330069053 1.1379103767237464 1.1061719015345777 0.9606904494934851 1.027214306605836 1.0 19.576608228861094 -7.815555172335182 0.009103231771869157 4.899004808458151e-08 2.065304987178807 0.16476184597866372 0.050154906124895475 3244.273353772754 23.62237855832126 2699.7349029066754 2656.2277317536264 1.529131474750876e-08 7.815555172335182 2.065304938188759 SRTSPVTR ddPTM_KYSE-520_SHP099_60min_R1 2 SRTSPVTR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 ; 102.01 0.0026058 536850000.0 394670.0 388740.0 325910.0 325040.0 391960.0 359460.0 339140.0 373920.0 436980.0 332880.0 False True 372776.86834486044 370064.3468893643 346918.68007443723 355931.7038731601 422805.0220526681 357216.4768050833 373423.58088743966 372622.95879358385 357635.4473693661 329930.942176721 1.1298633158971487 1.1216418334329692 1.0514887684848215 1.0788066785276305 1.2814955131616632 1.0827007447326578 1.1318234610666578 1.1293968256969233 1.0839706182447288 1.0 18.331804560104384 -8.108979225868506 2.6132328786649675 1.0000836163549125 1.1256858561557193 0.302847318286782 0.058270702842092764 0.5713200707992394 8.267081793836608 0.05712991851729509 0.015431893802508485 7.78073768690203e-09 8.108979225868506 0.12560223980080676 SRVPVRPPQQYS(ph)DDEDDYEDDEEDDVQNTNSALR ddPTM_KYSE-520_SHP099_60min_R1 4 SRVPVRPPQQYSDDEDDYEDDEEDDVQNTNSALR 34 2 Q92560;F8W6N3 Q92560 BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1;Ubiquitin carboxyl-terminal hydrolase 1 S(0.076)RVPVRPPQQY(0.246)S(0.651)DDEDDY(0.027)EDDEEDDVQNTNSALR;S(0.002)RVPVRPPQQYS(0.998)DDEDDYEDDEEDDVQNTNSALR;SRVPVRPPQQYS(1)DDEDDYEDDEEDDVQNTNSALR;S(0.007)RVPVRPPQQYS(0.992)DDEDDYEDDEEDDVQNTNSALR 357.89 2.2263e-97 6000170000.0 932726.0 814837.0 801206.0 784233.0 736839.0 674424.0 633105.0 836198.0 1053043.0 660346.0 True False 880985.8294368158 775691.0074247273 852853.0207349255 858766.2685317512 794824.0372595813 670214.6696511195 697105.4319093657 833297.4243080809 861836.9362537847 654495.8481814148 1.346052586711936 1.1851733048881303 1.3030686491055168 1.3121034624099193 1.2144065382050675 1.0240166862988989 1.0651029091266906 1.2731897790085072 1.3167951158872724 1.0 19.32002451484708 -6.002235760506206 15.04764605177776 1.1452234881862744 1.2783774773410486 0.3264261103399996 0.10150196481700892 0.7886237392363027 5291.720928664465 0.033770543827437195 0.037095489320397745 9.948651995774546e-07 6.002235760506206 0.13315398915477417 SRVS(ph)VS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 6 SRVSVSPGR 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 S(0.01)RVS(0.99)VS(1)PGR;S(0.011)RVS(0.989)VS(1)PGR;S(0.006)RVS(0.994)VS(1)PGR;S(0.287)RVS(0.714)VS(0.999)PGR;S(0.304)RVS(0.699)VS(0.997)PGR;S(0.003)RVS(0.997)VS(1)PGR 103.97 0.009330799999999998 22304370000.0 26152518.0 24175654.0 22440642.0 23057121.0 23261360.0 23697122.0 22473970.0 24172478.0 28459781.0 23039103.0 True False 24701785.692787867 23014219.29344355 23887201.689616702 25248462.84746376 25091896.692966264 23549219.47159689 24745858.212410472 24088629.315716792 23292202.183095727 22834994.471570913 1.081751332304506 1.0078486912749538 1.0460787156903306 1.1056916558003798 1.0988352427326027 1.0312776515411541 1.0836813752339 1.0548997218154192 1.0200222387657694 1.0 24.444743104646516 -7.837441685124899 2.729135861791117 1.0009224357344588 1.064039994970074 0.3727739507899597 0.0286688895839713 0.2909409461903527 4.172397720398173 0.028602632705543304 0.007896324382956819 1.4539796055572335e-08 7.837441685124899 0.06311755923561524 SRVSSS(ph)PGVK ddPTM_KYSE-520_SHP099_60min_R1 1 SRVSSSPGVK 10 1 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 S(0.002)RVS(0.002)S(0.105)S(0.891)PGVK 83.204 0.0041292 0.0 708260.0 652840.0 677160.0 476210.0 558380.0 490370.0 424730.0 426460.0 773150.0 479420.0 True False 668971.4059186946 621476.5864671814 720810.8170943088 521468.8552222422 602321.3292523951 487309.4189364838 467665.85336534184 424980.7097965127 632765.4495254366 475172.71178311564 1.407848955400526 1.3078962050136491 1.5169448901840779 1.0974301391706551 1.2675840053864755 1.025541675379094 0.9842018318147862 0.8943710344850101 1.3316535942288106 1.0 18.85809246186846 -5.652467538963642 1.2688054326014069 1.0420127834763273 1.4013908582140693 0.5235099746665166 0.1372531310210158 0.34884644964084444 1.169570657875827 0.05169721340202531 0.08316113817426095 2.226037422180425e-06 5.652467538963642 0.35937807473774197 SRVSVS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 3 SRVSVSPGR 9 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 SRVS(0.012)VS(0.988)PGR;SRVSVS(1)PGR;S(0.004)RVS(0.153)VS(0.843)PGR 95.162 0.0021682 1414120000.0 569040.0 585070.0 519540.0 398450.0 466820.0 461380.0 330410.0 332789.0 585310.0 462580.0 True False 537474.2168468826 556962.3589920262 553030.3796933912 436318.568201639 503556.07815753197 458500.3562797787 363811.0672908499 331634.63263253664 479032.4584643776 458481.90108179476 1.1722910230015717 1.2147968276999928 1.2062207436945884 0.9516593068824286 1.0983117915219425 1.0000402528386407 0.7935123860558778 0.7233320047095422 1.04482305044996 1.0 18.806505257908366 -5.744449059528739 0.9030198771963069 0.8790257342101818 1.2113831180787833 0.5350335084971369 0.10724036996052266 0.45018973292845704 0.790138428250845 0.05461095452212171 0.0903853090385889 1.8011543880414489e-06 5.744449059528739 0.3323573838686015 SRWDETPASQMGGS(ph)TPVLTPGK ddPTM_KYSE-520_SHP099_60min_R1 1 SRWDETPASQMGGSTPVLTPGK 22 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 SRWDETPASQMGGS(0.5)T(0.5)PVLTPGK 109.26 0.00015732 1948100000.0 1057700.0 919550.0 778920.0 578910.0 686170.0 945160.0 570810.0 822540.0 1091100.0 857370.0 True False 999027.2725273233 875373.4377273113 829130.4295160644 633929.4323443623 740167.675226755 939260.9058507002 628513.0453687534 819686.8007222789 892983.7443926847 849774.3688237664 1.1756382743223341 1.0301245481656247 0.9757065639244018 0.7459973560061942 0.8710167102960215 1.105306232230561 0.7396234440898981 0.9645934624468212 1.0508480570303944 1.0 19.696720303698143 -4.4674756346202 2.054142059851725 0.9199326543964415 1.1925063229446748 0.3111683052589249 0.11276052635036143 0.5592435443223868 3.5471772055015167 0.03089463868218508 0.24268627253484595 3.408194453801411e-05 4.4674756346202 0.2725736685482334 SRWDETPASQMGGST(ph)PVLTPGK ddPTM_KYSE-520_SHP099_60min_R1 1 SRWDETPASQMGGSTPVLTPGK 22 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 SRWDETPASQMGGS(0.175)T(0.825)PVLTPGK 102.57 0.0030471 2069600000.0 505390.0 445260.0 419780.0 398410.0 390460.0 427280.0 356050.0 388200.0 487730.0 375100.0 True False 477355.0092300127 423869.0412511148 446839.69047174713 436274.76661366597 421186.98058650066 424613.18702853186 392043.00871313544 386853.42480656086 399170.5266727557 371776.9058233837 1.2839824145956633 1.1401166522497177 1.201902763384724 1.1734853880916492 1.1329024853055012 1.1421182445104552 1.0545114625796024 1.0405525968585563 1.0736829545361422 1.0 18.504077629608457 -5.687214789435457 0.2813422330679048 0.987790381371315 1.3135092069483543 0.8240709612931953 0.03368023256298667 1.5413322983606945 0.19448006841990945 0.04781264626191977 0.16844738647262086 2.054874063608845e-06 5.687214789435457 0.32571882557703924 SRWS(ph)GSQQVEQPTGSVLWMAPEVIR ddPTM_KYSE-520_SHP099_60min_R1 6 SRWSGSQQVEQPTGSVLWMAPEVIR 25 1 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 S(0.281)RWS(0.693)GS(0.027)QQVEQPTGSVLWMAPEVIR;S(0.199)RWS(0.747)GS(0.053)QQVEQPTGSVLWMAPEVIR;S(0.202)RWS(0.76)GS(0.038)QQVEQPTGSVLWMAPEVIR;S(0.284)RWS(0.705)GS(0.011)QQVEQPTGSVLWMAPEVIR;S(0.18)RWS(0.54)GS(0.281)QQVEQPTGSVLWMAPEVIR;S(0.182)RWS(0.697)GS(0.121)QQVEQPTGSVLWMAPEVIR 243.26 6.586e-29 3250840000.0 489828.0 560163.0 553321.0 456938.0 533180.0 506286.0 441821.0 486557.0 601976.0 411579.0 True False 462656.26439209 533251.9286581947 588988.9570049025 500365.2501365807 575138.2326207815 503126.0812767443 486484.57843742776 484869.24733025744 492672.33298004733 407932.73026361683 1.1341484271024522 1.3072055490952965 1.4438384402847069 1.2265876528545077 1.4098849882653743 1.2333555117080481 1.1925607884492344 1.1886009906999182 1.207729354449371 1.0 18.637971740073326 -8.07967086135437 0.5479826383598124 0.9987416181396909 1.3068720033194086 0.4904763639956693 0.08729958319232159 0.8699936218328834 0.6155361197678101 0.09995549962535315 0.044239192563212924 8.323943786237463e-09 8.07967086135437 0.3081303851797177 SS(ph)DEENGPPSS(ph)PDLDR ddPTM_KYSE-520_SHP099_60min_R1 2 SSDEENGPPSSPDLDR 16 0 Q96B36;Q96B36-3;Q96B36-2 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 2 S(0.422)S(0.577)DEENGPPS(0.251)S(0.749)PDLDR;S(0.399)S(0.601)DEENGPPS(0.124)S(0.876)PDLDR 186.74 2.5087e-09 752520000.0 1122680.0 1003270.0 971140.0 946400.0 1029010.0 1107820.0 1072970.0 1066720.0 1213670.0 1071170.0 True False 1060402.7023929048 955071.4032610286 1033741.2382789397 1036345.5714544653 1109987.2327339924 1100905.684455035 1181436.2787780731 1063019.79729432 993298.1221309409 1061680.2671576499 0.9987966577092317 0.899584774065702 0.9736841403735336 0.9761371700248219 1.0455004835925517 1.036946544558467 1.1127985659383464 1.0012617076704802 0.9355906414180769 1.0 20.01791792262483 -5.549520995108971 2.92864496859168 1.027238217069791 0.9523874234545144 0.2681038710853939 0.04810430126403639 0.3299703192401988 5.771418265371171 0.015446790291157152 0.022010424604564555 2.8214931802785826e-06 5.549520995108971 -0.07485079361527647 SS(ph)DGS(ph)LSHEEDLAK ddPTM_KYSE-520_SHP099_60min_R1 1 SSDGSLSHEEDLAK 14 0 A0A2R8Y7R9;Q13136-2;Q13136;E9PJZ7;H0YEF9 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 2 S(0.447)S(0.555)DGS(0.994)LS(0.005)HEEDLAK 78.69 0.008954799999999999 0.0 560200.0 508730.0 507630.0 471350.0 469090.0 546740.0 471780.0 445100.0 576810.0 487110.0 True False 529124.5892689868 484289.8471807025 540352.6420367181 516146.962283455 506004.7142429993 543327.592857094 519472.1265290917 443556.0519871205 472075.8441968148 482794.58436584595 1.0959621470567977 1.0030970993943948 1.1192185238500034 1.0690819222038657 1.0480745448038529 1.1253804629369624 1.0759692493473636 0.918726237515142 0.9777985492875603 1.0 18.881049967529833 -7.247692564279762 24.545531321976608 0.9611967979649605 1.0759694076908721 0.6421286416976608 0.037990313318243034 348.42951664038316 622137.4241420673 0.017462276234915492 0.010009409373673624 5.653370335325834e-08 7.247692564279762 0.11477260972591163 SS(ph)DQDSTNKEAEAAGVKPAGVRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSDQDSTNKEAEAAGVKPAGVRPR 24 3 Q92625;A0A3B3ISP1;A0A3B3ITU5 Q92625 ANKS1A Ankyrin repeat and SAM domain-containing protein 1A 1 S(0.062)S(0.935)DQDS(0.001)T(0.002)NKEAEAAGVKPAGVRPR 137.42 1.9419e-06 1562000000.0 432720.0 434190.0 500440.0 419580.0 408020.0 432310.0 338460.0 412280.0 585590.0 363150.0 True False 408716.1589940664 413330.86066752305 532699.1631323108 459456.757048673 440128.85268376715 429611.79293274775 372674.83985127864 410849.89690687536 479261.6175226028 359932.7735264246 1.1355347138569485 1.14835572381457 1.4799962723961355 1.2765071447847518 1.2228084938518524 1.1935889825303936 1.0354012395148522 1.1414628706399603 1.3315309212524866 1.0 18.45736794666708 -6.279464231627771 2.635579565084379 1.1380812109805283 1.2646510227421375 0.1878329345654841 0.12068520419077831 0.525818616752382 7.251658661114876 0.04764184571662743 0.04360953002730211 5.254552896789101e-07 6.279464231627771 0.1265698117616092 SS(ph)DSWEVWGSASTNR ddPTM_KYSE-520_SHP099_60min_R1 2 SSDSWEVWGSASTNR 15 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 S(0.183)S(0.817)DSWEVWGSASTNR;S(0.318)S(0.682)DSWEVWGSASTNR 456.34 8.552999999999997e-132 1014170000.0 777170.0 716830.0 630380.0 644650.0 714300.0 686810.0 696770.0 800580.0 746900.0 754120.0 True False 734058.8308500139 682392.4108162341 671015.3034436618 705917.3421789102 770511.3461889499 682523.3640307661 767206.3114198892 797802.9748367764 611281.7878167857 747439.0834964813 0.982098537604061 0.912973947821992 0.8977524968385209 0.9444479928406545 1.030868418847644 0.9131491503467508 1.0264466073020129 1.0673819344644053 0.8178349263691714 1.0 19.511596478471674 -5.5359379598923315 24.78278464602607 0.9795153353020704 0.9278041071649605 0.08090905942401416 0.06898970027593386 471.0703714658602 893956.6291584678 0.019754824313504355 0.025518358161204218 2.9111329513543547e-06 5.5359379598923315 -0.05171122813710982 SS(ph)DTEENVKR ddPTM_KYSE-520_SHP099_60min_R1 3 SSDTEENVKR 10 1 H0YBT0;A0A087WUS5;P01106;P01106-2;A0A494C1T8 H0YBT0 MYC Myc proto-oncogene protein 1 S(0.407)S(0.593)DTEENVKR;S(0.26)S(0.729)DT(0.011)EENVKR;S(0.187)S(0.811)DT(0.002)EENVKR 162.49 7.9737e-05 891010000.0 1832270.0 1641900.0 1569670.0 1654580.0 1763570.0 1826880.0 1658470.0 1858930.0 2182850.0 1785010.0 True False 1730630.3305603093 1563020.6594578554 1670853.4397607995 1811830.7857323827 1902352.9256593094 1815477.7642732735 1826124.3327074116 1852481.805707525 1786499.465170534 1769196.200116764 0.9782014738931106 0.883463721748158 0.9444138754370635 1.0240982801188498 1.0752639676333 1.0261596560932331 1.0321773993109924 1.0470753925343408 1.0097802974326013 1.0 20.75466261805333 -5.2452191114882085 4.050616858611709 1.0350406273496942 0.9277231751669698 0.6968754687126429 0.028808924172867897 0.10393221221944943 4.038043524254415 0.007706127612421907 0.013144422507961046 5.685660039306369e-06 5.2452191114882085 -0.10731745218272437 SS(ph)DYQFPS(ph)SPFTDTLK ddPTM_KYSE-520_SHP099_60min_R1 3 SSDYQFPSSPFTDTLK 16 0 Q9UK61;Q9UK61-3 Q9UK61 FAM208A Protein FAM208A 2 S(0.43)S(0.57)DYQFPS(0.57)S(0.43)PFT(0.001)DTLK;S(0.411)S(0.589)DYQFPS(0.589)S(0.411)PFTDTLK;S(0.419)S(0.581)DYQFPS(0.725)S(0.274)PFT(0.001)DTLK 209.7 1.0026e-17 212972000.0 749890.0 694220.0 635570.0 738700.0 730220.0 767080.0 771650.0 874360.0 1010360.0 803090.0 True False 708292.1068313464 660868.6291545357 676539.8591479558 808905.8259017466 787684.1596165414 762292.3691861208 849655.9125782638 871327.0492371579 826904.0931029165 795975.247394565 0.889841875296715 0.8302627893489545 0.8499508764405018 1.0162449505176283 0.989583736673769 0.9576835104876728 1.0674401187215428 1.0946660113982678 1.038856542096742 1.0 19.602364042119866 -5.274340879779137 6.024281796841442 1.0256233573801967 0.8534054490002883 0.7935582536094524 0.038978460534165184 0.07444406891595089 11.562439279428721 0.012306198914867145 0.019426161534800864 5.316907688608051e-06 5.274340879779137 -0.17221790837990847 SS(ph)FSSDPDESEGIPLKR ddPTM_KYSE-520_SHP099_60min_R1 1 SSFSSDPDESEGIPLKR 17 1 P46013-2 P46013-2 MKI67 Antigen KI-67 1 S(0.235)S(0.765)FSSDPDESEGIPLKR 176.46 9.192e-09 408570000.0 444960.0 429830.0 457580.0 398150.0 390470.0 448200.0 469130.0 603500.0 634240.0 559520.0 True False 420277.18179423065 409180.32161201676 487076.33895388595 435990.05629183736 421197.76752960816 445402.6175486513 516554.23866758397 601406.5993579592 519078.0038893002 554563.0880999733 0.757852786838322 0.737842691647469 0.8783064531443874 0.7861865775914024 0.7595128066902231 0.8031595090013579 0.9314616312408854 1.084469219576946 0.936012538569325 1.0 19.080992067757343 -6.86571832389818 3.1970251059653645 1.008423239530055 0.7863337850321701 0.8076646298351058 0.048989406019768617 0.10204077053462134 2.066139954831808 0.022270345188093888 0.014353067205499788 1.3623279790200245e-07 6.86571832389818 -0.22208945449788486 SS(ph)GASSIFDLR ddPTM_KYSE-520_SHP099_60min_R1 1 SSGASSIFDLR 11 0 Q96HP0 Q96HP0 DOCK6 Dedicator of cytokinesis protein 6 1 S(0.354)S(0.645)GASSIFDLR 79.65899999999999 0.011039 78248000.0 77959.0 81727.0 61972.0 65166.0 63882.0 75060.0 80728.0 85996.0 79238.0 87396.0 True False 73634.45886258643 77800.712245272 65966.81427870593 71359.35704712772 68909.14996114027 74591.52269790662 88888.7740693553 85697.69994761738 64850.37662742876 86621.73943305903 0.8500690397644447 0.8981661272848962 0.7615503303265441 0.8238042495356951 0.7955179659534892 0.8611178116037566 1.0261716591139136 0.9893324759870962 0.748661676062796 1.0 16.402441522703626 -6.53810941694564 23.61305567277074 0.9406514643471962 0.8263739734713583 0.3278631174724109 0.07806551287693762 151.50558614275988 234884.6366388518 0.029732409499890835 0.023041888324099827 2.896613717607896e-07 6.53810941694564 -0.11427749087583783 SS(ph)GFISELPSEEGK ddPTM_KYSE-520_SHP099_60min_R1 5 SSGFISELPSEEGK 14 0 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.205)S(0.795)GFISELPSEEGK;S(0.07)S(0.93)GFISELPSEEGK;S(0.027)S(0.973)GFISELPSEEGK;S(0.182)S(0.818)GFISELPSEEGK;S(0.136)S(0.864)GFISELPSEEGK 388.0 1.6651999999999998e-81 2053520000.0 6812370.0 6199550.0 6071190.0 6342580.0 6176100.0 6131790.0 6345290.0 6336260.0 7401370.0 6299870.0 True False 6434474.255977082 5901714.312285729 6462548.621647461 6945376.896233789 6662123.9327979395 6093519.224137982 6986733.83726266 6314280.992954198 6057467.781354295 6244058.05302469 1.0304955849762083 0.9451728767042571 1.0349917580469856 1.1123177967362703 1.0669541948878476 0.9758908665473114 1.1189412042506892 1.011246362435002 0.9701171465598388 1.0 22.574052519904168 -4.917305069463331 10.337990140082958 1.0417852280222555 0.9880666548216048 0.11528294158489805 0.05230573319293647 0.7125269049961392 83.73052698841447 0.0137266236459607 0.02862995292105982 1.2097480494352974e-05 4.917305069463331 -0.053718573200650654 SS(ph)GPYGGGGQYFAK ddPTM_KYSE-520_SHP099_60min_R1 2 SSGPYGGGGQYFAK 14 0 F8W6I7;P09651-3;P09651-2;P09651;Q32P51;H0YH80 F8W6I7 HNRNPA1;HNRNPA1L2 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed;Heterogeneous nuclear ribonucleoprotein A1-like 2 1 S(0.218)S(0.782)GPYGGGGQYFAK;S(0.082)S(0.918)GPYGGGGQYFAK 189.86 9.612799999999998e-11 2643600000.0 1997470.0 1712870.0 1768460.0 1677530.0 1757180.0 1921290.0 1816980.0 1963680.0 1990100.0 1853850.0 True False 1886666.3572422734 1630581.154129713 1882457.761236047 1836961.9468322147 1895460.0690134356 1909298.5164436607 2000658.0704159318 1956868.4524063598 1628748.0063384476 1837426.331273473 1.0267983674396748 0.8874266828426254 1.024507883225644 0.9997472636408032 1.0315842527954526 1.0391156825973942 1.088837161177138 1.065005121076122 0.8864290113931284 1.0 20.809254977838076 -4.8734240199225125 21.641202266899658 1.0225068641271102 0.9567664254140069 0.13242596115123195 0.05985212817184864 5.316509996046224 996.0801641688989 0.015373266315689306 0.032002151092799414 1.3383693431843002e-05 4.8734240199225125 -0.06574043871310331 SS(ph)GSPYGGGYGSGGGSGGYGSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 S(0.056)S(0.471)GS(0.471)PY(0.001)GGGYGSGGGSGGYGSR 54.271 0.06080700000000001 0.0 25030.0 24915.0 21477.0 26034.0 23504.0 20004.0 17047.0 22384.0 31307.0 23815.0 True False 23641.536003932026 23718.04600182256 22861.441784414994 28508.263532592486 25353.6310805335 19879.147615892973 18770.277122687323 22306.355128464886 25622.43798524587 23604.017627789635 1.0015894911084213 1.0048308883610846 0.9685402775457858 1.207771659136068 1.074123544573361 0.8421933896748461 0.7952153492966629 0.9450236599638454 1.085511728947359 1.0 14.526744820423648 -6.244782050406616 24.750448400394607 0.9215044599326859 1.0528728081834529 0.26875335149265345 0.09609761080625674 989.0040147869666 1469521.1086790948 0.03414929364789165 0.03405271244344116 5.691384799014238e-07 6.244782050406616 0.13136834825076693 SS(ph)IDSQASLSGPLSGGAPGAGAR ddPTM_KYSE-520_SHP099_60min_R1 4 SSIDSQASLSGPLSGGAPGAGAR 23 0 A6NKD9 A6NKD9 CCDC85C Coiled-coil domain-containing protein 85C 1 S(0.022)S(0.978)IDSQASLSGPLSGGAPGAGAR;S(0.029)S(0.971)IDSQASLSGPLSGGAPGAGAR;S(0.029)S(0.971)IDSQASLSGPLSGGAPGAGAR;S(0.207)S(0.793)IDSQASLSGPLSGGAPGAGAR 408.4 1.1948999999999998e-114 6852710000.0 1642720.0 1642400.0 1382920.0 1261700.0 1199510.0 1493260.0 1265200.0 1634110.0 1861160.0 1661810.0 True False 1551595.0469188686 1563496.638707339 1472065.2359502353 1381611.5886560618 1293904.6127216965 1483940.0104433289 1393098.7631620802 1628441.6538141416 1523220.2600255585 1647087.6562686171 0.9420233592387659 0.9492491991891623 0.893738247838682 0.8388209233417631 0.7855711915496735 0.9009478061447622 0.8457951572037555 0.9886794109691059 0.9247961116267042 1.0 20.651485905140664 -7.265917286694017 24.956156816409663 0.9675533250492354 0.8783371158369528 0.41938605170032783 0.04938239050226414 423.76829341877254 2361713.707323103 0.02842364694470723 0.014370040954180183 5.421041267003368e-08 7.265917286694017 -0.08921620921228257 SS(ph)ILLDVKPWDDETDMAK ddPTM_KYSE-520_SHP099_60min_R1 2 SSILLDVKPWDDETDMAK 18 1 P24534 P24534 EEF1B2 Elongation factor 1-beta 1 S(0.117)S(0.883)ILLDVKPWDDETDMAK;S(0.164)S(0.836)ILLDVKPWDDETDMAK 174.7 7.3102e-09 218379000.0 243350.0 237140.0 214733.0 199796.0 192622.0 215940.0 229280.0 228210.0 283080.0 229780.0 True False 229850.89039380208 225747.43844560315 228575.0327649479 218784.55176914207 207780.2555307406 214592.23836112424 252457.85995716215 227418.39277461448 231679.80786608113 227744.3279661351 1.0092496811950469 0.9912318803354396 1.0036475323281653 0.9606586197908501 0.9123399796004443 0.9422506381499585 1.108514368773662 0.9985688548451178 1.0172802542881825 1.0 17.797055598202764 -6.721413205108326 24.999983207055003 1.0309720845705994 0.9693642228985314 0.36672678284824367 0.03939116223056111 177.95672976314592 111149.91323043646 0.015928648926567594 0.012338120177530863 1.8992703783427023e-07 6.721413205108326 -0.061607861672068 SS(ph)ISGSLPSSGSLQAVSSR ddPTM_KYSE-520_SHP099_60min_R1 2 SSISGSLPSSGSLQAVSSR 19 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 S(0.02)S(0.979)IS(0.001)GSLPSSGSLQAVSSR;S(0.026)S(0.974)ISGSLPSSGSLQAVSSR 265.6 3.4589e-35 1489030000.0 1436810.0 1313490.0 1074760.0 1091190.0 766810.0 1106880.0 1107420.0 1275450.0 1349750.0 1448180.0 True False 1357107.2850902746 1250387.968811314 1144040.7492768003 1194896.369521764 827153.5844479187 1099971.5513437118 1219368.820977673 1271025.7616422668 1104669.424428582 1435350.2518669916 0.9454885895098115 0.8711378753617154 0.7970463988066476 0.8324772075439678 0.5762729921648196 0.7663436502086892 0.8495270192007931 0.8855161031176993 0.7696166304995691 1.0 20.45297139331538 -9.35882231782341 11.306523924435197 1.0000078617325276 0.807605901342514 0.26784595635576935 0.09395003195654467 0.0 0.0 0.09724153394237349 0.023584536214205348 4.377011444694875e-10 9.35882231782341 -0.19240196039001367 SS(ph)ISSISGR ddPTM_KYSE-520_SHP099_60min_R1 4 SSISSISGR 9 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 S(0.278)S(0.713)IS(0.003)S(0.006)ISGR;S(0.36)S(0.64)ISSISGR;S(0.001)S(0.999)ISSISGR;S(0.016)S(0.984)ISSISGR 215.84 6.5542e-09 1384720000.0 3237440.0 2681930.0 2555490.0 2421790.0 2730530.0 3084870.0 3013220.0 3021630.0 3503550.0 3244780.0 True False 3057852.7495233584 2553086.057140999 2720220.9743285663 2651956.1934622847 2945407.176409513 3065616.1820555776 3317825.683793271 3011148.6707837475 2867393.6373082125 3216033.7736006426 0.9508148747143952 0.7938617057129306 0.8458309725034483 0.8246045844516049 0.9158508223972603 0.9532288520164828 1.0316513809737338 0.9362926146800046 0.8915931358823711 1.0 21.616851126571834 -5.987634124743432 3.239310491337342 0.9620394824228519 0.8491857156448323 0.4979438653151752 0.05119550542014969 0.20691628137179885 4.5246991188001875 0.01725369029027528 0.01886786808005266 1.0288827245312485e-06 5.987634124743432 -0.11285376677801962 SS(ph)ITEPEGPGGPNIQK ddPTM_KYSE-520_SHP099_60min_R1 2 SSITEPEGPGGPNIQK 16 0 H0YJL1;A0A3B3ISJ2;Q96KQ4 H0YJL1 PPP1R13B Apoptosis-stimulating of p53 protein 1 1 S(0.205)S(0.795)ITEPEGPGGPNIQK;S(0.229)S(0.771)ITEPEGPGGPNIQK 316.54 3.4561e-47 762650000.0 762880.0 850040.0 773050.0 720550.0 853260.0 729590.0 823480.0 1007870.0 993710.0 916490.0 True False 720561.5256364231 809202.8024639472 822882.0399237324 789030.8553587438 920406.7076147032 725036.3581823314 906725.3947903189 1004373.9342086267 813277.3133905734 908370.6116184301 0.7932461887473546 0.8908289107044127 0.9058880036394131 0.8686221738866469 1.0132502040932705 0.7981724077252402 0.9981888264469719 1.1056873938481442 0.8953144267201353 1.0 19.792921505934938 -1.0763395084724114 0.21203577705474333 1.0181001743988793 1.6454286647248578e-17 0.3362487366467499 0.07746926349937841 57.69706903815585 0.7426023301788549 0.1292942857791892 19.745613315452534 0.08388039975116546 1.0763395084724114 -1.0181001743988793 SS(ph)ITEPEGPNGPNIQK ddPTM_KYSE-520_SHP099_60min_R1 2 SSITEPEGPNGPNIQK 16 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 S(0.14)S(0.86)ITEPEGPNGPNIQK;S(0.468)S(0.532)ITEPEGPNGPNIQK 332.29 1.8461e-58 1716190000.0 1608240.0 1548200.0 1604700.0 1709590.0 1858650.0 1504730.0 1962140.0 1941380.0 2263660.0 1876870.0 True False 1519027.7212530437 1473822.1481044234 1708141.5296107824 1872068.919593023 2004915.1807281142 1495338.421918747 2160492.2598410104 1934645.805901496 1852636.4062248573 1860242.3919827626 0.8165751559042631 0.792274251170855 0.9182359981540569 1.0063575196765917 1.0777709342443005 0.8038406330074662 1.1614036262974432 1.0399966231494324 0.995911293178413 1.0 20.82705918793031 -4.988304907420861 2.5359844673992598 1.0142811270800065 0.801883882183498 0.4883377601110548 0.0848440651627435 0.23523100827460022 3.0197343799335146 0.023788817998493313 0.057064466386930184 1.0272948065943677e-05 4.988304907420861 -0.21239724489650846 SS(ph)KELLLQPVTISR ddPTM_KYSE-520_SHP099_60min_R1 3 SSKELLLQPVTISR 14 1 F8WDD7;H7C0A3;F8WCF6;A0A0A6YYG9;P59998;P59998-3;P59998-2 F8WDD7 ARPC4;ARPC4-TTLL3 Actin-related protein 2/3 complex subunit 4 1 S(0.033)S(0.967)KELLLQPVTIS(0.001)R;S(0.174)S(0.826)KELLLQPVTISR;S(0.158)S(0.842)KELLLQPVTISR 154.46 2.1558e-06 348280000.0 931490.0 905330.0 829870.0 791480.0 823800.0 857350.0 779650.0 811760.0 1056690.0 823810.0 True False 879818.3928207215 861836.5878719662 883364.7480389471 866702.0212328602 888628.3732191749 851998.9606321653 858464.6306507399 808944.1940262078 864821.7329871744 816511.6843144814 1.077533132375675 1.0555104163580196 1.0818764323998542 1.0614692206891283 1.0883229110986212 1.0434620557175223 1.0513807054353188 0.9907319265190588 1.0591663899007797 1.0 19.639114005394568 -6.790275438353976 1.7540978436776673 1.0191827357310836 1.0713076024678825 0.5552811615430311 0.02059456623729682 0.25931914641086223 1.6276081570188405 0.010390881712559169 0.0062741879379334215 1.6207818386626407e-07 6.790275438353976 0.052124866736798836 SS(ph)KS(ph)FSLDEPPLFIPDNIATIR ddPTM_KYSE-520_SHP099_60min_R1 1 SSKSFSLDEPPLFIPDNIATIR 22 1 Q92576-2;Q92576;E7EVH3;D6R9X2;E9PE34;A0A1B0GX99 Q92576-2 PHF3 PHD finger protein 3 2 S(0.581)S(0.651)KS(0.684)FS(0.084)LDEPPLFIPDNIATIR 103.04 0.00069392 79995000.0 36560.0 53962.0 40393.0 56679.0 55982.0 71953.0 78357.0 118780.0 136020.0 69489.0 True False 34531.94391944687 51369.584521386656 42996.79741108509 62065.75511883724 60387.46490599157 71503.91463738984 86278.09025062542 118367.97990346048 111322.19678516436 68873.38152162397 0.5013830184685353 0.74585541447908 0.6242875906649874 0.9011573665705761 0.8767896039347494 1.0381937558117422 1.2527058835282676 1.7186317455067432 1.616331220069583 1.0 16.071658891263564 -6.466789215141085 1.140715386705867 1.4970283250523866 0.6765311681740517 0.7091573639661684 0.20417641067482473 0.24701886039548415 0.6600427767121759 0.11712792897741915 0.08740792333722411 3.4135854981982547e-07 6.466789215141085 -0.8204971568783349 SS(ph)LAELMAR ddPTM_KYSE-520_SHP099_60min_R1 4 SSLAELMAR 9 0 Q9ULE0 Q9ULE0 WWC3 Protein WWC3 1 S(0.276)S(0.724)LAELMAR;S(0.006)S(0.994)LAELMAR;S(0.456)S(0.544)LAELMAR;S(0.181)S(0.819)LAELMAR 203.52 1.1934e-06 181635000.0 298109.0 272009.0 290649.0 297756.0 311056.0 324350.0 263176.0 303564.0 373418.0 330548.0 True False 281572.29950444144 258941.27934616696 309384.6995948427 326054.6407163939 335534.3375334592 322325.6113384766 289780.3984302431 302511.00733637053 305614.70430173876 327619.60188245284 0.8594488787806634 0.7903717538826414 0.9443412354363562 0.995223237080239 1.0241583092267053 0.9838410445725537 0.8845026267207718 0.9233605242121896 0.9328340018293251 1.0 18.321662152211186 -4.8254298617572084 6.416021008917708 0.9606354326653139 0.8253667737720276 0.625438113013591 0.042213482864073254 0.1287337320047955 9.775034198953874 0.012260722907703274 0.026313686672533084 1.4947554247877615e-05 4.8254298617572084 -0.13526865889328632 SS(ph)LEGPTILDIEK ddPTM_KYSE-520_SHP099_60min_R1 3 SSLEGPTILDIEK 13 0 Q7L576;Q7L576-2;A0A0G2JR96;A0A0G2JQT1 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 1 S(0.018)S(0.982)LEGPTILDIEK;S(0.284)S(0.716)LEGPTILDIEK;S(0.193)S(0.807)LEGPTILDIEK 273.72 1.7012000000000001e-22 438002000.0 1473520.0 1261120.0 1070410.0 1096360.0 1080320.0 1214490.0 1061540.0 1139380.0 1309160.0 1194730.0 True False 1391780.9082107055 1200533.902220287 1139410.3413165559 1200557.7247673462 1165335.037820028 1206909.9174178075 1168850.822832023 1135427.7567132916 1071449.5452379494 1184145.6216858749 1.1753460746062794 1.0138397509852546 0.9622214704424367 1.0138598689054015 0.9841146363070902 1.019224236711295 0.9870836841569565 0.9588582146651665 0.9048292081784 1.0 20.175415078302557 -4.269457974972064 3.095723593848711 0.9805508313105862 1.203659272985559 0.7815070157679379 0.031026531279037765 0.16327338601063512 2.412295239857163 0.00828394780057095 0.08824435418204739 5.377024620304118e-05 4.269457974972064 0.2231084416749729 SS(ph)LGSLQTPEAVTTR ddPTM_KYSE-520_SHP099_60min_R1 2 SSLGSLQTPEAVTTR 15 0 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 S(0.027)S(0.973)LGSLQTPEAVTTR;S(0.006)S(0.994)LGSLQTPEAVTTR 312.38 8.7195e-43 3351500000.0 2358400.0 2140150.0 1651090.0 1475980.0 1439030.0 1935620.0 1492780.0 1705340.0 2037790.0 2022620.0 True False 2227574.8506461564 2037333.9815693595 1757521.9032374057 1616256.6954304327 1552273.474039317 1923539.077598219 1643684.7705288401 1699424.5735693492 1667778.7045055146 2004701.1603745462 1.1111755181654954 1.0162781475063927 0.8767001975042709 0.8062332318540989 0.7743166436583994 0.9595141239100379 0.8199151090538322 0.8477196537621793 0.8319338250863869 1.0 20.934955760329284 -4.634061012123974 2.555029953618153 0.8537083243543105 1.1042601902892362 0.6093048022231371 0.06566872655897046 0.1812047496558755 2.221705454322507 0.01700901325912696 0.068857180612987 2.322410508187944e-05 4.634061012123974 0.2505518659349256 SS(ph)LLSLMTGK ddPTM_KYSE-520_SHP099_60min_R1 3 SSLLSLMTGK 10 0 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 S(0.003)S(0.997)LLSLMTGK;S(0.006)S(0.994)LLSLMTGK;S(0.047)S(0.953)LLSLMTGK 297.52 4.902e-28 602804000.0 2247510.0 2351630.0 1493117.0 1776357.0 1719834.0 2122660.0 2227040.0 2253744.0 2099290.0 2006731.0 True False 2122836.1399998926 2238654.1649314067 1589365.7108916687 1945181.4351987941 1855175.1512831124 2109411.691579251 2452170.9370158687 2245926.2880918058 1718111.8547943507 1988952.9245530923 1.067313415915504 1.1255440675824044 0.7990966961919378 0.9779926971553973 0.9327395979972531 1.060563910557725 1.2328954128297729 1.1292003246363682 0.8638273101312348 1.0 20.92357769953428 -6.3841031303114635 6.550620989594306 1.0778652508133224 0.9787300918964753 0.08262838367413927 0.11933226926319941 0.5440359948987552 26.908398060834557 0.04410100635238482 0.03875453896775271 4.129494287657871e-07 6.3841031303114635 -0.0991351589168471 SS(ph)LPGSLR ddPTM_KYSE-520_SHP099_60min_R1 1 SSLPGSLR 8 0 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 S(0.162)S(0.838)LPGSLR 99.855 0.0059317 0.0 320200.0 246660.0 267900.0 243100.0 251450.0 242760.0 223070.0 249790.0 279630.0 229450.0 True False 302437.86769712466 234810.08335579184 285169.26265515527 266204.1509093198 271237.6844452071 241244.84479274997 245620.0925534032 248923.53679142453 228856.24089865852 227417.251509399 1.329880937746823 1.0325077882057128 1.2539473622271327 1.1705539010012957 1.192687373736891 1.060802745577019 1.0800416016075713 1.0945675191274427 1.0063275295946492 1.0 17.794982173359262 -6.663734154814775 0.5287327063030075 0.9989169965670418 1.2129061996241248 0.5035467207034172 0.07406950706057129 0.8094099738754968 0.48044208764654556 0.06677551559014948 0.060411516950223884 2.169031430256276e-07 6.663734154814775 0.21398920305708302 SS(ph)LPNGEGLQLK ddPTM_KYSE-520_SHP099_60min_R1 5 SSLPNGEGLQLK 12 0 Q9ULR3 Q9ULR3 PPM1H Protein phosphatase 1H 1 S(0.134)S(0.866)LPNGEGLQLK;S(0.048)S(0.952)LPNGEGLQLK;S(0.027)S(0.973)LPNGEGLQLK;S(0.048)S(0.952)LPNGEGLQLK;S(0.004)S(0.996)LPNGEGLQLK 240.46 2.5232e-15 7317630000.0 10450800.0 8452800.0 7530700.0 8563600.0 8888800.0 8805900.0 9350700.0 10020800.0 9720400.0 9009000.0 True False 9871073.290846698 8046714.800088532 8016140.971546018 9377481.969259782 9588297.989646288 8750939.111717239 10295960.010037675 9986040.183672298 7955420.391343275 8929187.268895945 1.1054839587956378 0.9011699002123711 0.8977458675852342 1.0502055435577473 1.0738153093783012 0.980037583286038 1.1530679892785725 1.1183593627224966 0.8909456316427921 1.0 23.090097437112657 -5.293891055429822 23.55196676824 1.0468572969109038 0.9614369017004883 0.11137521588907795 0.08748619726525043 563.0948521027101 408667.4463468044 0.02455050541964029 0.03641899041009425 5.08286932452176e-06 5.293891055429822 -0.08542039521041545 SS(ph)LQILQDS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 2 SSLQILQDSVK 11 0 Q5TGP6;Q5TGP6-2 Q5TGP6 MROH9 Maestro heat-like repeat-containing protein family member 9 2 S(0.042)S(0.958)LQILQDS(1)VK;S(0.411)S(0.589)LQILQDS(0.999)VK 59.975 0.041573 2468350000.0 3217000.0 2546100.0 2142780.0 3658100.0 3137900.0 3211500.0 3218400.0 3524500.0 3618400.0 2875600.0 True False 3038546.597069489 2423781.5342259877 2280907.0273692203 4005764.7241521287 3384834.8777912734 3191455.837254558 3543747.2805571 3512274.3321244856 2961389.7724411064 2850124.4211829463 1.066110158028939 0.8504125350499595 0.8002833176042637 1.4054701241742749 1.1876095136879656 1.1197601808309625 1.2433658173723747 1.232323159655856 1.0390387698274517 1.0 21.442593470322787 -5.245959663488161 24.99703043950217 1.1860733978188087 0.9000830482435639 0.49630644737693297 0.12417362112562243 634.4084557911935 1024457.2310598355 0.032930702468960585 0.05677071075500583 5.6759732040678475e-06 5.245959663488161 -0.28599034957524483 SS(ph)LS(ph)GDEEDELFK ddPTM_KYSE-520_SHP099_60min_R1 2 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 2 S(0.437)S(0.564)LS(0.999)GDEEDELFK;S(0.421)S(0.579)LS(1)GDEEDELFK 142.85 1.1102e-05 4297850000.0 11701300.0 10905100.0 9465600.0 10307800.0 10233700.0 10219200.0 9950400.0 11194600.0 13230400.0 11235400.0 True False 11052205.563036753 10381202.627111182 10075767.72149549 11287450.21284691 11039033.968212023 10155418.182180228 10956283.538545651 11155768.545439273 10828092.871242749 11135863.097008923 0.992487557251432 0.9322315241015812 0.9048034834589361 1.0136125161128016 0.9913047486348042 0.9119560912084093 0.9838737638116702 1.001787508364367 0.972362247713979 1.0 23.4087100442967 -6.976715053555161 24.99621530678246 0.9908110845349635 0.9573737412530181 0.175779419119659 0.03398661028209247 420.89610127919417 451827.5729072468 0.01476658121939745 0.009954947020339684 1.0550789207993529e-07 6.976715053555161 -0.033437343281945364 SS(ph)LSGDEEDELFK ddPTM_KYSE-520_SHP099_60min_R1 6 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 S(0.177)S(0.823)LSGDEEDELFK;S(0.318)S(0.682)LSGDEEDELFK;S(0.227)S(0.773)LSGDEEDELFK;SS(1)LSGDEEDELFK;S(0.204)S(0.796)LSGDEEDELFK;S(0.015)S(0.985)LSGDEEDELFK 340.11 2.8275999999999995e-51 1621910000.0 2973580.0 2801740.0 2559790.0 2548620.0 2812370.0 2958700.0 2685360.0 2948030.0 3824480.0 2891200.0 True False 2808629.5897152275 2667140.2049025195 2724798.159208812 2790840.078529458 3033687.5188036105 2940233.6558259604 2956822.395388023 2937803.9720053766 3130050.8392951405 2865586.2173195602 0.9801239176612144 0.9307485458934595 0.9508693693249125 0.9739159344296334 1.0586620986896322 1.0260496222571256 1.031838573733023 1.0252017385655101 1.092289884833044 1.0 21.450398872811586 -5.6372125707550085 4.580349963124943 1.0390898473579349 0.9531290091044994 0.707137473253763 0.025432169288469045 0.11116467325148043 3.95079907716963 0.007392566315574941 0.009635007542283037 2.3056183993194372e-06 5.6372125707550085 -0.08596083825343548 SS(ph)LSLAK ddPTM_KYSE-520_SHP099_60min_R1 1 SSLSLAK 7 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.264)S(0.736)LSLAK 140.84 0.0028294 0.0 1194200.0 1216100.0 1086600.0 962770.0 936870.0 928710.0 968750.0 1080400.0 1203500.0 1197800.0 True False 1127955.3454213205 1157676.7305966853 1156643.9746214699 1054271.3713326445 1010596.3389388799 922913.5764025173 1066680.7040888928 1076652.3445672558 984974.7377661039 1187188.423874299 0.9501064218098793 0.9751415254022571 0.9742716079111101 0.8880404745626731 0.8512518473191271 0.7773943527773453 0.8984931815691578 0.9068925563253749 0.8296700995042673 1.0 20.179117498925375 -5.337453620105232 4.155207160459714 0.8689006820512923 0.9676693038973958 0.342183089874735 0.054983602526971355 0.22888876129307958 7.502981183449726 0.015495003759245939 0.024020712396055122 4.59776087077621e-06 5.337453620105232 0.09876862184610347 SS(ph)LTTAALPFTQSILTQVGR ddPTM_KYSE-520_SHP099_60min_R1 2 SSLTTAALPFTQSILTQVGR 20 0 Q3MII6;C9JMI8 Q3MII6 TBC1D25 TBC1 domain family member 25 1 S(0.135)S(0.864)LTTAALPFTQSILTQVGR;S(0.148)S(0.852)LTTAALPFTQSILTQVGR 205.06 8.944400000000001e-14 134532000.0 160856.0 185061.0 158918.0 108867.0 122111.0 166899.0 106364.0 141158.0 156559.0 128422.0 True False 151932.99702151367 176170.391777776 169162.10855779008 119213.68694794303 131720.44098345083 165857.32143295935 117116.3111326047 140668.3558445248 128131.83213122017 127284.28099080402 1.1936509036217162 1.3840702905844586 1.3290102064528426 0.9365939456149808 1.0348523789278214 1.3030463788764468 0.9201160600582413 1.1051510426074351 1.0066587259150828 1.0 16.957694738634025 -5.247394052502643 24.909230966280152 1.0534342277560331 1.3104264798123832 0.5349903224072304 0.11009087402942905 590.6144024811526 1047446.5208051737 0.0296174702973574 0.050965550546563425 5.657257508230022e-06 5.247394052502643 0.2569922520563501 SS(ph)LVFKPTLPEQK ddPTM_KYSE-520_SHP099_60min_R1 1 SSLVFKPTLPEQK 13 1 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 S(0.144)S(0.854)LVFKPT(0.003)LPEQK 176.23 5.6925e-07 441120000.0 668160.0 705910.0 544410.0 699400.0 675650.0 586930.0 626860.0 801480.0 786490.0 815260.0 True False 631095.8328560619 671997.0240074889 579503.5396867989 765870.7657177225 728819.8110773681 583266.7521593709 690229.1263640391 798699.852946838 643683.2417994696 808037.4306626831 0.7810230181273795 0.8316409593258254 0.7171741279504091 0.9478159509140819 0.901962933177059 0.7218313533830054 0.8542043971873584 0.9884441272625364 0.7966007729017895 1.0 19.6240625988256 -13.999999926357699 0.0835886204362439 1.5307025201692759 0.6903672016350637 0.2970228939605063 0.08206549609311714 310.47911684705474 1.8221339469011588 29.861862120299158 2.509750599981871 1.0000001695676793e-14 13.999999926357699 -0.8403353185342122 SS(ph)LVTSK ddPTM_KYSE-520_SHP099_60min_R1 10 SSLVTSK 7 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7 A6NMQ3 ENSA Alpha-endosulfine 1 S(0.163)S(0.837)LVTSK;S(0.148)S(0.852)LVTSK;S(0.005)S(0.995)LVTSK;S(0.041)S(0.959)LVTSK;S(0.045)S(0.955)LVTSK;S(0.031)S(0.969)LVTSK;S(0.091)S(0.909)LVTSK;S(0.007)S(0.993)LVTSK;S(0.111)S(0.889)LVTSK;S(0.152)S(0.848)LVTSK 166.61 0.00076482 26429330000.0 54902800.0 41729500.0 38378100.0 30223700.0 29222400.0 33237600.0 37388500.0 29651600.0 35289700.0 38363700.0 True False 51857232.23798165 39724752.182743505 40852013.73313113 33096151.360913254 31522036.627288178 33030151.809538323 41168094.456596196 29548745.520335495 28881980.060942635 38023827.46450696 1.3638088455557864 1.044733127400819 1.074379315739956 0.8704055737630988 0.8290074600383712 0.8686698318408386 1.0826920171312113 0.7771112875976922 0.7595758235517529 1.0 25.18040042466038 -3.0485044838271285 0.7159931237743706 0.8759912868113147 3.663210533547448 0.6756494846473795 0.0997270054121266 8.33608542413106 0.8578979516390822 0.03996275409878416 27.871840364558324 0.0008943252985185899 3.0485044838271285 2.787219246736133 SS(ph)LYFPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSLYFPR 7 0 B8ZZW8;E7ENZ2;E9PG19;O94868-2;O94868 B8ZZW8 FCHSD2 F-BAR and double SH3 domains protein 2 1 S(0.226)S(0.774)LYFPR 144.12 0.0031620999999999997 0.0 448020.0 448870.0 400550.0 342090.0 432230.0 386930.0 428100.0 476770.0 517840.0 422010.0 True False 423167.4374942718 427305.6114323937 426370.09390265966 374602.1307468913 466244.0419477107 384515.0263456039 471376.5258533724 475116.1961489549 423813.3096840873 418271.3197188113 1.011705602427515 1.021599118293972 1.0193624898529807 0.8955960236497276 1.1146928320620924 0.9192957016610641 1.1269635368981594 1.1359043131820712 1.0132497489165684 1.0 18.674079552222757 -6.777108411477847 24.99882848422391 1.080354747187766 0.9999093362745943 0.199121899043458 0.06910949678937062 351.6476656929201 561024.0466163685 0.027508647923560812 0.018617903959762254 1.6706735176155253e-07 6.777108411477847 -0.08044541091317159 SS(ph)MEMEGIFNHK ddPTM_KYSE-520_SHP099_60min_R1 9 SSMEMEGIFNHK 12 0 E7EPJ7;O75962-4;O75962;O75962-5;O75962-2;E7EWP2 E7EPJ7 TRIO Triple functional domain protein 1 S(0.351)S(0.649)MEMEGIFNHK;S(0.246)S(0.754)MEMEGIFNHK;S(0.002)S(0.998)MEMEGIFNHK;S(0.167)S(0.833)MEMEGIFNHK;S(0.182)S(0.818)MEMEGIFNHK;S(0.021)S(0.979)MEMEGIFNHK;S(0.16)S(0.84)MEMEGIFNHK;S(0.011)S(0.989)MEMEGIFNHK;S(0.032)S(0.968)MEMEGIFNHK 332.7 9.6619e-51 25670339000.0 10284632.0 10111607.0 9110067.0 9614024.0 10583700.0 9625450.0 9864328.0 10069383.0 11494758.0 9805168.0 True False 9714122.961054387 9625830.221888462 9697316.49544257 10527737.950398287 11416576.976984436 9565373.996170616 10861510.540803878 10034454.660584647 9407599.706468487 9718301.839825263 0.9995699990759958 0.99048479667941 0.9978406366947056 1.0832898714110712 1.1747501945452754 0.9842639335374463 1.1176346155759214 1.0325316939080653 0.9680291743889319 1.0 23.21227281100519 -5.2418312634302495 21.134832139847795 1.057944939392806 0.995417002170935 0.1486831606421658 0.05950909548328956 198.32595995243238 213762.9896604004 0.016311599558863906 0.02815127880064804 5.730186228444428e-06 5.2418312634302495 -0.062527937221871 SS(ph)MGSTAVATDVK ddPTM_KYSE-520_SHP099_60min_R1 2 SSMGSTAVATDVK 13 0 Q6UXY1;B0QYF0;Q6UXY1-2 Q6UXY1 BAIAP2L2 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 2 1 S(0.117)S(0.883)MGSTAVATDVK;S(0.062)S(0.938)MGSTAVATDVK 192.4 2.1415e-08 401160000.0 817440.0 697440.0 579190.0 634640.0 665000.0 752350.0 713590.0 764750.0 781960.0 781770.0 True False 772094.9736737595 663933.9355212179 616525.5141367662 694955.9947885267 717331.7166675781 747654.3045799382 785726.6411672687 762097.2607439911 639975.7756074634 774844.1260078573 0.9964519930630926 0.8568612876268811 0.7956768251096148 0.8968978036512592 0.9257755109578052 0.9649093017352972 1.0140447798391146 0.9835491231900532 0.8259413140353004 1.0 19.563546589658312 -5.880286012172182 2.7258946035500977 0.9593056760463086 0.8768287410948518 0.19788622141579704 0.06680552967925749 0.4188856876091462 6.306694171492536 0.022868257911435774 0.02676390293553993 1.3173888634993747e-06 5.880286012172182 -0.0824769349514568 SS(ph)PAFGDRR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPAFGDRR 9 1 P13716;P13716-2 P13716 ALAD Delta-aminolevulinic acid dehydratase 1 S(0.214)S(0.786)PAFGDRR;S(0.381)S(0.619)PAFGDRR 111.5 0.00060073 641960000.0 707390.0 595470.0 645430.0 461760.0 585160.0 596120.0 602650.0 602200.0 714410.0 598240.0 True False 668149.6665529952 566862.7273813073 687035.4505245123 505645.5315667934 631208.7628950389 592399.3939605135 663571.7432972078 600111.1087545366 584691.1528105374 592940.0590236773 1.126841839043826 0.9560202903387767 1.1586929236249792 0.8527768091759204 1.064540594431036 0.999088162361548 1.1191211205898808 1.012094055076439 0.9860881279859512 1.0 19.177526742917795 -4.234701509855866 22.733689441529116 1.020361877995191 1.1268423340653093 0.14242971018520345 0.0807313124506162 4978.737911035247 4232907.649973788 0.01886001957845826 1.253937264916155 5.825034342233178e-05 4.234701509855866 0.10648045607011825 SS(ph)PAS(ph)SPELPWRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSPASSPELPWRPR 14 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 2 S(0.359)S(0.641)PAS(0.641)S(0.359)PELPWRPR 132.84 1.077e-05 252720000.0 70498.0 73190.0 62726.0 67711.0 66060.0 75868.0 66028.0 69441.0 80420.0 70904.0 True False 66587.33540572123 69673.84253957027 66769.41832514854 74146.23308194557 71258.5461700154 75394.47967019427 72702.75461118078 69200.12537865122 65817.755223224 70275.84572247727 0.9475138252861139 0.9914337113026808 0.9501047997177325 1.055074219593922 1.0139834738014943 1.0728363194365633 1.0345340403057899 0.9846928865420685 0.9365629761773556 1.0 16.100741290122798 -5.244655350512593 24.884824936802445 1.0166291044297797 0.9658590698251005 0.27868178948950273 0.037297060327978075 1117.5174558915262 1656883.9676639154 0.010795749079593927 0.018643548221925533 5.6930454303985275e-06 5.244655350512593 -0.050770034604679215 SS(ph)PASSPELPWRPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSPASSPELPWRPR 14 1 Q9NYF3 Q9NYF3 FAM53C Protein FAM53C 1 S(0.294)S(0.705)PAS(0.001)SPELPWRPR 79.462 0.0067664000000000005 381320000.0 213840.0 200070.0 169830.0 177660.0 167160.0 209330.0 204410.0 179950.0 198970.0 217300.0 True False 201977.86892052842 190458.33688880768 180777.51353760756 194544.7529845734 180314.54098970292 208023.4938229789 225073.75764935242 179325.79545064556 162842.06362552696 215374.8910568416 0.937796731686901 0.8843107752915452 0.839362066072488 0.9032842780787723 0.8372124536193702 0.9658669717821354 1.0450324851932304 0.8326216420618782 0.756086574560587 1.0 17.71649054112827 -4.252184669136193 21.672820748300662 0.8942097399246519 0.9377968777200685 0.022109474858781897 0.08269355294870057 1022.4777759538634 2394092.14043524 0.021260081756870646 0.2302453625054902 5.595196339802849e-05 4.252184669136193 0.043587137795416564 SS(ph)PELTR ddPTM_KYSE-520_SHP099_60min_R1 3 SSPELTR 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.18)S(0.82)PELTR;S(0.132)S(0.868)PELTR;S(0.2)S(0.8)PELTR 196.95 0.0025823 2617600000.0 3216530.0 2871550.0 2597910.0 2393960.0 2434000.0 2465930.0 2195860.0 2326740.0 2696040.0 2330820.0 True False 3038102.6689064126 2733596.427715576 2765375.435402966 2621481.238629681 2625541.952434414 2450539.2161797117 2417838.958328399 2318669.082005199 2206507.097637662 2310170.7481505205 1.31509875247908 1.183287611923942 1.197043741297856 1.1347564853067202 1.1365142401428006 1.0607610793018514 1.046606169809775 1.0036786604892656 0.9551272776716399 1.0 21.13956805663918 -5.215805589507751 0.38148184415543906 0.9641281216911192 1.3783390946225067 0.9217683372733702 0.029296611690991414 0.7490109396411307 0.14633526062430502 0.028214722093985713 0.13375211132101014 6.084072918464713e-06 5.215805589507751 0.41421097293138753 SS(ph)PEQPIGQGR ddPTM_KYSE-520_SHP099_60min_R1 1 SSPEQPIGQGR 11 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 S(0.162)S(0.838)PEQPIGQGR 189.56 3.9234000000000004e-05 0.0 656110.0 657170.0 498380.0 523540.0 635450.0 634640.0 619050.0 603410.0 684070.0 558780.0 True False 619714.2703771411 625598.5667677192 530506.3722361946 573297.0841919589 685456.2997840795 630678.9763522454 681629.6153457843 601316.9115469527 559860.1320013774 553829.6439242617 1.1189618995221018 1.129586640279718 0.9578872818673884 1.0351505927522353 1.2376663244804902 1.1387598754798565 1.230756827164347 1.0857434558508123 1.0108887058381086 1.0 19.079082750962062 -2.906507273615085 2.1102281055336833 1.0995817326866215 5.979460291612053 0.0019313104065316056 0.08993195053404826 3867.7203039804217 100.28749118980163 0.025309736750711572 90062.95072687099 0.0012402028538816203 2.906507273615085 4.879878558925432 SS(ph)PEQPRPSTSK ddPTM_KYSE-520_SHP099_60min_R1 10 SSPEQPRPSTSK 12 1 P29590-12;P29590-13;P29590-11;H3BT57;H3BUJ5;H3BRN3;P29590-2;P29590-5;P29590-9;P29590-3;P29590-8;P29590;P29590-4;H3BVD2 P29590-12;P29590-2 PML Protein PML 1 S(0.448)S(0.552)PEQPRPSTSK;S(0.206)S(0.794)PEQPRPSTSK;S(0.237)S(0.763)PEQPRPSTSK;S(0.002)S(0.998)PEQPRPSTSK;S(0.017)S(0.911)PEQPRPS(0.006)T(0.006)S(0.06)K;S(0.001)S(0.999)PEQPRPSTSK;S(0.407)S(0.593)PEQPRPSTSK;S(0.192)S(0.808)PEQPRPSTSK;S(0.18)S(0.82)PEQPRPSTSK;S(0.15)S(0.848)PEQPRPS(0.001)TSK 192.32 4.854e-08 119297640000.0 41083060.0 35819470.0 36121190.0 34672330.0 36892160.0 35857970.0 34774310.0 37390590.0 45078320.0 35032780.0 True False 38804100.764750294 34098648.89507936 38449619.70334748 37967577.81858387 39795363.104323246 35634167.10839137 38289636.61936044 37260890.77031931 36893233.41997215 34722416.82429044 1.1175518386613132 0.9820355843209994 1.1073428413096418 1.0934601128347508 1.1461000340415237 1.026258261016644 1.102735354313658 1.0731076399109711 1.0625191675644852 1.0 25.04936403305009 -8.294458737132747 1.6836522454392093 1.0000407707037742 1.0803986777380457 0.2315059140665764 0.0444181417022922 1.7708680730469244 7.750100272340828 0.041637085316288874 0.0118475363201932 5.076229666369866e-09 8.294458737132747 0.08035790703427148 SS(ph)PFKVS(ph)PLTFGR ddPTM_KYSE-520_SHP099_60min_R1 5 SSPFKVSPLTFGR 13 1 O95810 O95810 SDPR Serum deprivation-response protein 2 S(0.14)S(0.86)PFKVS(0.981)PLT(0.019)FGR;S(0.101)S(0.899)PFKVS(0.989)PLT(0.011)FGR;S(0.22)S(0.78)PFKVS(0.945)PLT(0.054)FGR;S(0.385)S(0.615)PFKVS(0.946)PLT(0.054)FGR;S(0.502)S(0.498)PFKVS(0.937)PLT(0.063)FGR 171.78 1.8851e-06 724090000.0 2256200.0 2069010.0 2054920.0 2066580.0 2087110.0 2002550.0 1923750.0 2011010.0 2301250.0 1952030.0 True False 2131044.0883768066 1969611.6539526766 2187383.431188252 2262987.1418600692 2251353.682968527 1990051.342641795 2118221.4239907158 2004034.275683263 1883401.0097916434 1934736.5328563573 1.1014647483968423 1.0180257727623674 1.1305846527634944 1.1696616585407098 1.1636487163679752 1.028590357832223 1.0948371460497879 1.0358176638782945 0.9734664011389063 1.0 20.88370568679408 -7.297897892687099 1.2715236596535764 0.9847923000343792 1.1080526098692207 0.4964706940281879 0.046939398708307385 0.43710754692582826 1.2435589412122872 0.04370227013566995 0.01645395660130415 5.036190011241526e-08 7.297897892687099 0.12326030983484149 SS(ph)PGAVAGLSNAPGTPR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPGAVAGLSNAPGTPR 17 0 V9GYB2;U3KPY3;Q9BWG4-2;Q9BWG4 V9GYB2 SSBP4 Single-stranded DNA-binding protein 4 1 S(0.157)S(0.843)PGAVAGLSNAPGTPR;S(0.23)S(0.77)PGAVAGLSNAPGTPR 273.55 7.041e-30 2246400000.0 1235440.0 1276380.0 1097460.0 702360.0 853980.0 1045770.0 852720.0 966280.0 1242880.0 985680.0 True False 1166907.6804114187 1215060.7889145606 1168204.0275980858 769112.0832277656 921183.3675184639 1039242.9615213147 938921.2593452176 962928.2002114467 1017204.3224551181 976947.642047437 1.1944423940323692 1.2437317381391066 1.1957693302271792 0.7872602892166255 0.9429198944458218 1.0637652590504465 0.961076335040304 0.9856497510894145 1.0412065894578681 1.0 19.89792171975984 -5.123862767319334 8.170202771175747 0.9710253397887588 1.21905525546418 0.7101585399694388 0.07106661273036846 0.15523107490689045 9.602143435960079 0.019891933794514365 0.03461747872955674 7.518604368085314e-06 5.123862767319334 0.2480299156754212 SS(ph)PGGQDEGGFMAQGK ddPTM_KYSE-520_SHP099_60min_R1 3 SSPGGQDEGGFMAQGK 16 0 A0A1B0GTU4;F5GZ78;P49023;A0A1B0GV30 A0A1B0GTU4 PXN Paxillin 1 S(0.007)S(0.993)PGGQDEGGFMAQGK;S(0.077)S(0.923)PGGQDEGGFMAQGK;S(0.282)S(0.718)PGGQDEGGFMAQGK 315.21 8.6191e-49 5991900000.0 5953300.0 5412100.0 5080880.0 4674370.0 5434500.0 5305100.0 5120320.0 5278990.0 6242000.0 5394170.0 True False 5623058.581390674 5152094.592272283 5408401.654495432 5118620.719399415 5862164.231924749 5271988.903073071 5637931.915107539 5260678.415815528 5108610.1480149655 5346381.850400752 1.0517502749956371 0.9636600483158706 1.0116003319310294 0.9573990153763026 1.0964731655830633 0.9860853658774662 1.0545322187723896 0.9839698253915775 0.955526614252597 1.0 22.35013145105145 -7.500396078820751 24.12862407408965 0.975091600275941 1.0149364760369577 0.1443140119591907 0.04166278347612198 877.4144325209537 941657.8105211809 0.02209151152995811 0.010463058015138709 3.159394961253414e-08 7.500396078820751 0.039844875761016696 SS(ph)PGPDTLVVLEFNPASK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPGPDTLVVLEFNPASK 18 0 O60303 O60303 KIAA0556 Uncharacterized protein KIAA0556 1 S(0.183)S(0.817)PGPDTLVVLEFNPASK;S(0.164)S(0.836)PGPDTLVVLEFNPASK 374.23 9.943099999999998e-73 1118451000.0 292640.0 328210.0 253848.0 228080.0 240024.0 263469.0 229797.0 298650.0 326940.0 285600.0 True False 276406.6758366226 312442.2989467466 270211.4482511604 249756.6546252476 258912.52325025384 261824.5922421369 253027.12336259615 297614.05285543436 267575.9374867052 283069.80619343807 0.9764611759678029 1.1037641320644302 0.9545753108917211 0.8823147123454571 0.9146596266552139 0.924947085536975 0.8938682891162472 1.0513804239935691 0.9452648485718572 1.0 18.11079834597609 -4.894951491166214 7.943484311054249 0.9407956985423677 1.0394382918834448 0.31779939383567846 0.05516347098169536 0.2535680992211092 17.206966658392012 0.014563338436996951 0.030553057694188854 1.2736453338014683e-05 4.894951491166214 0.09864259334107717 SS(ph)PGQTPEEGAQALAEFAALHGPALR ddPTM_KYSE-520_SHP099_60min_R1 4 SSPGQTPEEGAQALAEFAALHGPALR 26 0 Q14166 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 1 S(0.156)S(0.844)PGQTPEEGAQALAEFAALHGPALR;S(0.416)S(0.584)PGQTPEEGAQALAEFAALHGPALR;S(0.426)S(0.573)PGQTPEEGAQALAEFAALHGPALR;S(0.035)S(0.965)PGQTPEEGAQALAEFAALHGPALR 333.73 3.3536999999999996e-73 43168730000.0 6394940.0 6156520.0 5272020.0 4876950.0 5724890.0 5574440.0 4051260.0 5131430.0 7655170.0 5399890.0 True False 6040199.93020316 5860751.53807508 5611862.844730247 5340453.861691514 6175406.272831661 5539647.85222648 4460800.897287391 5113630.267014769 6265184.099131642 5352051.175650854 1.12857663949161 1.095047738844232 1.0485443170389337 0.9978331085449815 1.1538391674815554 1.0350513607622245 0.8334750081579556 0.955452423601482 1.1706136383065777 1.0 22.351660480240902 -6.52675347615595 24.996230571118197 0.9787572910344329 1.080091939432463 0.20664123841385962 0.08642050259935855 179.24920453367798 1156332.0352253043 0.03361749833163916 0.02615635266655426 2.9733533534212397e-07 6.52675347615595 0.10133464839803019 SS(ph)PGVERVCFR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPGVERVCFR 11 1 H7C5F2;H7C5H3;G5E9V5;P82650-2;P82650 H7C5F2 MRPS22 28S ribosomal protein S22, mitochondrial 1 S(0.145)S(0.855)PGVERVCFR;S(0.136)S(0.864)PGVERVCFR 59.898 0.025317 3211400000.0 1016470.0 1458230.0 1038560.0 3205800.0 1169170.0 995470.0 1086320.0 967380.0 1350000.0 934080.0 True False 960084.3828172918 1388174.4419521475 1105507.2393547539 3510478.2681410834 1261177.0273326824 989256.9024791538 1196135.8270615167 964024.3845681886 1104874.0307305672 925804.7779032434 1.0370268178910078 1.4994245818174279 1.1941040549158748 3.7918126498456743 1.3622494260496125 1.0685372619480495 1.2919957377736992 1.04128257660487 1.1934201001131994 1.0 19.820348482561894 -5.984491979736029 24.999963108100317 1.1416534997842782 1.9009181490947735 0.20402812723042907 0.7101649162954239 410.1118032858274 661124.0522477211 0.2283227591643867 0.25881379632586304 1.0363537429515243e-06 5.984491979736029 0.7592646493104953 SS(ph)PIMR ddPTM_KYSE-520_SHP099_60min_R1 6 SSPIMR 6 0 A0A087WZV0;O43314-2;O43314;A0A087WWN8;K7ENU7;H0Y9S9 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 S(0.179)S(0.821)PIMR;S(0.182)S(0.818)PIMR;S(0.297)S(0.703)PIMR;S(0.297)S(0.703)PIMR;S(0.061)S(0.939)PIMR;S(0.162)S(0.838)PIMR 158.08 0.006762899999999999 6412200000.0 4799970.0 4453590.0 3991710.0 3889670.0 4287110.0 4015680.0 3721750.0 4025700.0 4926480.0 3805020.0 True False 4533706.095597034 4239632.851425128 4249022.013561817 4259343.067328074 4624481.1666808175 3990616.651579133 4097980.8107797024 4011735.7863054406 4031955.418454468 3771310.483060767 1.2021566815993132 1.124180273798161 1.126669902318237 1.129406631052881 1.2262265828952974 1.058151183654436 1.0866198445304913 1.0637511295674458 1.0691125635410859 1.0 21.84663449835929 -7.1856039392499325 0.5276070351491734 1.0051883590963644 1.1623395347150673 0.6135906669982172 0.04027774404738816 0.610511734827011 0.37727922667436997 0.04107400850064413 0.027344224048337317 6.522229264780357e-08 7.1856039392499325 0.15715117561870295 SS(ph)PLKITLFLEEDK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPLKITLFLEEDK 14 1 Q9NQW6 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.436)S(0.564)PLKITLFLEEDK;S(0.012)S(0.988)PLKITLFLEEDK 208.17 7.4495e-14 391038000.0 381336.0 524263.0 551900.0 289813.0 338554.0 307115.0 214160.0 222656.0 580849.0 274514.0 True False 360182.53190553084 499076.6185451932 587476.3570712223 317356.7403845445 365196.27369124105 305198.18136647495 235809.38280018253 221883.65830430083 475381.4636117188 272082.01952866 1.3238013027450009 1.834287393962182 2.1591884612181804 1.16640100266205 1.342228620339878 1.1217138930943822 0.8666849180577453 0.8155028350961226 1.7471991145730381 1.0 18.053682094038198 -5.337292309716545 8.993228426750104 1.13735778973348 1.7779216168809446 0.4558355310044354 0.3106939164434169 0.3475286418046497 38.982479190439086 0.08854183518369176 0.13148403665543182 4.599468938412495e-06 5.337292309716545 0.6405638271474647 SS(ph)PLLNYNTGVYR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPLLNYNTGVYR 13 0 Q5T0W9 Q5T0W9 FAM83B Protein FAM83B 1 S(0.132)S(0.868)PLLNYNTGVYR;S(0.076)S(0.924)PLLNYNTGVYR 174.44 4.5014e-07 1430250000.0 398620.0 407890.0 369930.0 368560.0 374790.0 397480.0 314540.0 352320.0 447070.0 330490.0 True False 376507.753970731 388294.3521446278 393776.2797089279 403587.83158839546 404283.84073660406 394999.1798822807 346336.7728145752 351097.88415210653 365893.35771756683 327562.1157173292 1.1494239898475915 1.1854067778695985 1.2021423138222078 1.232095569735155 1.2342203855023397 1.2058756520645584 1.0573163262672525 1.071851314011806 1.1170197655986436 1.0 18.321408985789326 -6.759385318019321 24.999957272785988 1.0675344437348941 1.2036981567577505 0.7939760469340867 0.03486859368409123 25.132978693805143 305899.75355277455 0.014123484564694276 0.010387126588821178 1.7402621797349075e-07 6.759385318019321 0.13616371302285635 SS(ph)PLPAK ddPTM_KYSE-520_SHP099_60min_R1 8 SSPLPAK 7 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 S(0.004)S(0.996)PLPAK;S(0.001)S(0.999)PLPAK;S(0.122)S(0.878)PLPAK;S(0.07)S(0.93)PLPAK;S(0.042)S(0.958)PLPAK;S(0.139)S(0.861)PLPAK;S(0.225)S(0.775)PLPAK;S(0.002)S(0.998)PLPAK 147.36 0.0014368 21499900000.0 83448400.0 75951600.0 72907000.0 74941500.0 79343600.0 78491200.0 78398800.0 83361000.0 84871500.0 78360100.0 True False 78819350.90173884 72302771.13032411 77606701.87532453 82063917.62801647 85587489.91667032 78001307.30596769 86324115.80255392 83071840.14760365 69460975.03640705 77665890.47723523 1.0148515701991687 0.9309462710855918 0.9992379073806146 1.056627524950227 1.101995861899723 1.0043187147751917 1.1114804101532387 1.0696051978178627 0.8943562561323735 1.0 26.210777795099713 -5.05364541716244 5.007233828236004 1.0413004976218652 0.970876196554672 0.13303155634645103 0.061542968743599304 0.33149868329478827 18.03229629972205 0.016621584157063555 0.030681029388122304 8.838011917342368e-06 5.05364541716244 -0.0704243010671931 SS(ph)PNPFITGLTR ddPTM_KYSE-520_SHP099_60min_R1 3 SSPNPFITGLTR 12 0 A0A0D9SGJ6;J3KQV8;O43426 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 1 S(0.105)S(0.895)PNPFITGLTR;S(0.149)S(0.851)PNPFITGLTR;S(0.171)S(0.829)PNPFITGLTR 241.15 2.4173e-15 3448410000.0 1272790.0 1189570.0 1090370.0 1038210.0 1051130.0 1118830.0 1051550.0 1020110.0 1341070.0 972850.0 True False 1202185.8014560388 1132421.2716190272 1160656.994853684 1136881.1662507819 1133847.9508884095 1111846.9669610835 1157850.9361390187 1016571.4765054642 1097565.4936235873 964231.3058658462 1.2467815493467282 1.1744290656505414 1.2037122086711904 1.179054402542865 1.175908668377297 1.1530915457704243 1.2008020576549407 1.0542817582474344 1.1382802932725895 1.0 19.87901974516269 -8.386567099862598 0.2248160330313675 0.9365734954374413 1.24315443336391 0.764110110004012 0.033888220521317444 2.1465024107624586 0.2897024190799082 0.20889127413536132 0.09421250437992552 4.10613193944481e-09 8.386567099862598 0.3065809379264687 SS(ph)PNVANQPPS(ph)PGGK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPNVANQPPSPGGK 15 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 2 S(0.411)S(0.589)PNVANQPPS(1)PGGK;S(0.17)S(0.83)PNVANQPPS(1)PGGK 232.7 1.4546000000000001e-18 636010000.0 1383460.0 1319530.0 1157070.0 1182990.0 1362970.0 1258020.0 1142600.0 1328380.0 1603200.0 1220660.0 True False 1306716.7159408645 1256137.798145091 1231656.5835774564 1295421.0139210874 1470227.9847615182 1250168.230541176 1258105.1587013865 1323772.1598262219 1312099.2933831448 1209845.9020591099 1.080068720914692 1.0382626382477256 1.0180276525144447 1.070732240954267 1.2152192128429318 1.0333284829195513 1.0398887631558211 1.0941659244150135 1.0845176986176535 1.0 20.20639187261517 -5.51150678302595 24.9092164565483 1.0843043002904325 1.044674956751962 0.0567515990374744 0.055604330437793364 1389.3078292435566 3043149.312791726 0.0162957441631247 0.022661963282959892 3.079592242532468e-06 5.51150678302595 -0.039629343538470474 SS(ph)PPFWALPPSAPSER ddPTM_KYSE-520_SHP099_60min_R1 1 SSPPFWALPPSAPSER 16 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 S(0.215)S(0.785)PPFWALPPSAPSER 136.57 0.00026436 0.0 146910.0 151280.0 135780.0 106520.0 163390.0 112090.0 127790.0 165760.0 170680.0 138070.0 True False 138760.60944217572 144012.28172409054 144532.5960556814 116643.62877359413 176247.86343806877 111390.40473232555 140708.26031021363 165185.01724867488 139688.81449266188 136846.8072168346 1.0139849972700399 1.052361283781376 1.05616345017585 0.8523664610513827 1.2879209023766478 0.8139788351497801 1.0282173415069928 1.2070798041121866 1.0207678011173773 1.0 17.06220224990568 -7.025789613126652 24.537350322098213 1.0918840034582125 1.0133890011777589 0.04058559863587474 0.13083559983621346 1726.7044118053177 1642853.9273049596 0.05820888926950719 0.03377306543444442 9.423459901019527e-08 7.025789613126652 -0.07849500228045359 SS(ph)PPLPPPAEER ddPTM_KYSE-520_SHP099_60min_R1 1 SSPPLPPPAEER 12 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 S(0.131)S(0.869)PPLPPPAEER 98.902 0.0025338 0.0 174010.0 124750.0 123880.0 125130.0 154450.0 146350.0 136450.0 132060.0 147700.0 136060.0 True False 164357.31841966504 118756.82274643256 131865.50301500814 137022.31757829353 166604.3362997106 145436.57536422406 150243.69762366905 131601.91468303555 120881.40321400373 134854.61425307827 1.2187741541510755 0.8806285450756962 0.9778345646188974 1.0160743726658636 1.2354366754336519 1.0784694032885438 1.1141161053763462 0.9758799534739059 0.8963831447928703 1.0 17.04104536083156 -7.422338918171364 5.342198568929814 0.9443911708264762 1.0670069419921009 0.2158820235464176 0.10223572721014336 0.36865036192810924 15.542803362936738 0.06107475844423917 0.028064790834361166 3.7814736789891555e-08 7.422338918171364 0.12261577116562472 SS(ph)PPLR ddPTM_KYSE-520_SHP099_60min_R1 1 SSPPLR 6 0 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 S(0.134)S(0.866)PPLR 92.18700000000001 0.014747999999999999 499230000.0 235860.0 219050.0 211970.0 201170.0 213630.0 207590.0 234530.0 214800.0 253270.0 237400.0 True False 222776.37562474652 208526.50919924665 225633.92536399132 220289.13631603404 230441.46561157104 206294.35380839914 258238.58119222498 214054.9089346967 207282.55241713396 235296.82069440544 0.9467887197425418 0.8862274831586991 0.9589331666195188 0.936218074115575 0.9793649779520806 0.8767409317286373 1.097501362024842 0.90972291212002 0.8809407275687106 1.0 17.844122301588897 -4.790230160053628 24.893233079382487 0.9542076800375869 0.9165080646730952 0.057294291566718725 0.062282207710912973 556.628798345763 481274.2372373671 0.015987446742731812 0.03328964473898811 1.6209508255496484e-05 4.790230160053628 -0.037699615364491734 SS(ph)PPLRTPDVLESSGPAVR ddPTM_KYSE-520_SHP099_60min_R1 3 SSPPLRTPDVLESSGPAVR 19 1 E9PJN1;O75676-2;O75676;A0A0A6YYC0 E9PJN1 RPS6KA4 Ribosomal protein S6 kinase;Ribosomal protein S6 kinase alpha-4 1 S(0.417)S(0.583)PPLRTPDVLESSGPAVR;S(0.422)S(0.578)PPLRTPDVLESSGPAVR;S(0.019)S(0.767)PPLRT(0.153)PDVLES(0.054)S(0.006)GPAVR 218.14 1.2097e-18 12048500000.0 1199250.0 1248430.0 1310230.0 823730.0 954080.0 895970.0 755525.0 697340.0 1320060.0 833830.0 True False 1132725.2118543934 1188453.548868365 1394689.5222421214 902017.0515365454 1029160.6680273736 890377.9188868029 831900.8402134291 694921.09030038 1080370.3800045894 826442.9149099244 1.3706030887539902 1.4380346511868842 1.6875811953619704 1.0914450777702631 1.245289480326108 1.077361669902932 1.0066041165155364 0.8408579440433835 1.3072534841953858 1.0 19.6565556457746 -5.2821594770300315 23.152183846417106 1.0781894211324978 1.4926690876186886 0.6419899692736428 0.1428317966397649 188.9112680368723 211084.856426962 0.04083063516814015 0.06066714968681906 5.222043954076281e-06 5.2821594770300315 0.4144796664861907 SS(ph)PPSAGNSPSSLK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPPSAGNSPSSLK 14 0 P57682;P57682-2 P57682 KLF3 Krueppel-like factor 3 1 S(0.253)S(0.747)PPSAGNSPSSLK 111.35 0.00016509 480570000.0 276350.0 266850.0 214310.0 213270.0 230090.0 245570.0 261620.0 273420.0 336000.0 228360.0 True False 261020.31460993295 254030.12544998372 228124.76550812414 233539.1166780363 248196.7739669825 244037.30654043384 288067.1027651465 272471.5698367077 274990.8698707195 226336.90806139176 1.1532379621406406 1.1223539617369007 1.0078990981278557 1.031820743149372 1.0965810927295228 1.078203765486807 1.2727358751715871 1.2038318105980417 1.2149625627833125 1.0 17.788112334054805 -6.727497786048299 24.392276111841458 1.1898685264742332 1.0785882958391158 0.24197564353357692 0.07664059320735815 164.0407957141149 117888.24156874012 0.028637696099168525 0.022181178935185605 1.8728466304135834e-07 6.727497786048299 -0.1112802306351175 SS(ph)PQKEVK ddPTM_KYSE-520_SHP099_60min_R1 6 SSPQKEVK 8 1 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 1 S(0.171)S(0.829)PQKEVK;S(0.415)S(0.585)PQKEVK;S(0.065)S(0.935)PQKEVK;S(0.1)S(0.9)PQKEVK;S(0.443)S(0.557)PQKEVK;S(0.146)S(0.854)PQKEVK 130.56 0.00052531 5899270000.0 6426930.0 6431370.0 6874490.0 4737700.0 5389960.0 5221320.0 4340860.0 3609540.0 8000400.0 4671430.0 True False 6070415.381132671 6122397.331516826 7317630.624972906 5187969.583558559 5814119.187322675 5188731.805129683 4779676.491511032 3597019.3482129737 6547729.033671726 4630044.764517544 1.3110921578239245 1.3223192523830354 1.5804664959293135 1.1205009556963004 1.2557371435972529 1.1206655807938726 1.032317555143353 0.7768865164714638 1.4141826627358767 1.0 22.14259471124063 -5.867039526643419 1.234987351659524 1.0458606532419648 1.3840323914325379 0.3650352545959251 0.17464622304035374 0.4672627430931555 1.5020697187988006 0.07209960815122823 0.0936196759474095 1.3581898274063251e-06 5.867039526643419 0.3381717381905731 SS(ph)PQLAK ddPTM_KYSE-520_SHP099_60min_R1 8 SSPQLAK 7 0 Q13370-2;Q13370 Q13370-2 PDE3B cGMP-inhibited 3,5-cyclic phosphodiesterase B 1 S(0.004)S(0.996)PQLAK;S(0.164)S(0.836)PQLAK;S(0.355)S(0.645)PQLAK;S(0.001)S(0.999)PQLAK;S(0.175)S(0.825)PQLAK;S(0.33)S(0.67)PQLAK;S(0.145)S(0.855)PQLAK;S(0.123)S(0.877)PQLAK 86.33200000000001 0.008335500000000001 9938690000.0 34793700.0 20701600.0 21191400.0 23989900.0 18864400.0 21351000.0 19806300.0 27609400.0 30678000.0 18529200.0 True False 32863624.10147863 19707064.062264904 22557431.551438835 26269892.883173577 20348920.956246447 21217740.489248697 21808514.094860185 27513629.435482405 25107648.52944618 18365045.703499477 1.7894659578884922 1.0730745994555138 1.2282807195595757 1.4304289413321647 1.1080245203184516 1.1553328443503756 1.1875012154586988 1.498151971940895 1.3671432641554435 1.0 24.130459150595836 -4.25014756441352 24.58234102547501 1.2422354528025399 1.7894663644290134 0.5482462784990625 0.15249939992383174 1089.7618057003474 2372362.2481670724 0.03859899035916512 0.5729896665481227 5.621502855267555e-05 4.25014756441352 0.5472309116264735 SS(ph)PQLDPLR ddPTM_KYSE-520_SHP099_60min_R1 8 SSPQLDPLR 9 0 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.01)S(0.99)PQLDPLR;S(0.022)S(0.978)PQLDPLR;S(0.243)S(0.757)PQLDPLR;S(0.077)S(0.923)PQLDPLR;S(0.019)S(0.981)PQLDPLR;S(0.182)S(0.818)PQLDPLR;S(0.198)S(0.802)PQLDPLR;S(0.061)S(0.939)PQLDPLR 202.03 1.611e-06 15997990000.0 11455900.0 9599340.0 8891850.0 9297460.0 9848170.0 9673530.0 10171110.0 10922630.0 11040800.0 9920730.0 True False 10820418.390229527 9138173.297496906 9465032.878463024 10181087.803016726 10623164.950577678 9613153.911056245 11199305.05926768 10884741.945891012 9036069.035918571 9832840.05041116 1.1004367339197256 0.929352379439427 0.9625940043708171 1.0354168023501007 1.0803760557595434 0.9776579158993105 1.1389695145909937 1.1069784406221341 0.9189683743040983 1.0 23.229176744268987 -5.409365435978668 6.402630903240876 1.0457383067002919 0.9910341949792388 0.048344149864710806 0.07282379436150331 0.5752049932643856 28.612210702620146 0.02040334917241302 0.030357453568286667 3.896140089986454e-06 5.409365435978668 -0.05470411172105305 SS(ph)PQLDPLRK ddPTM_KYSE-520_SHP099_60min_R1 3 SSPQLDPLRK 10 1 Q8ND56-2;Q8ND56;Q8ND56-3 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 S(0.428)S(0.572)PQLDPLRK;S(0.128)S(0.872)PQLDPLRK;S(0.397)S(0.603)PQLDPLRK 174.39 2.1075e-05 91789600000.0 18021000.0 15839700.0 14907200.0 14752900.0 15794500.0 14409900.0 15181100.0 15599100.0 17745200.0 14841100.0 True False 17021339.206027124 15078737.036125574 15868141.96436334 16155011.180378877 17037437.291588075 14319962.469018998 16715753.741258197 15544990.362957327 14523119.000088949 14709619.400201086 1.1571570101803201 1.0250936224712546 1.0787595200557274 1.098261670873553 1.1582514018925036 0.9735100602822694 1.1363824777838702 1.056790793835551 0.9873211947204027 1.0 23.81025658269102 -7.640267199195822 4.189793203961634 0.9941555453406629 1.085914581503271 0.3249270887721275 0.054390813773538375 0.25859839524329725 7.848686152275747 0.03994422940357384 0.0134358402630833 2.2894586324918816e-08 7.640267199195822 0.09175903616260805 SS(ph)PQSTDTAMDLLK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPQSTDTAMDLLK 14 0 Q9UGU5 Q9UGU5 HMGXB4 HMG domain-containing protein 4 1 S(0.117)S(0.883)PQSTDTAMDLLK 176.32 3.8133999999999998e-06 0.0 327250.0 316290.0 280460.0 228530.0 272940.0 320630.0 281470.0 343150.0 340040.0 316480.0 True False 309096.79014329804 301094.95363903104 298538.900351866 250249.42248994985 294418.82518383296 318628.82923834067 309923.7344824776 341959.6927418124 278297.3077108312 313676.2334177143 0.9854007323904648 0.9598908733326662 0.951742174085308 0.7977952928193299 0.9386073722447541 1.0157888781265463 0.9880370313863097 1.0901676834611622 0.8872119659133694 1.0 18.258916697818737 -6.177559903338593 5.505245024373928 1.0012066469389629 0.9217285790599821 0.217605155035675 0.06571782821171424 0.33746467393991053 16.960953794091957 0.022210002733880057 0.022175041605494838 6.644160220012505e-07 6.177559903338593 -0.07947806787898082 SS(ph)PRPTAEK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPRPTAEK 9 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.228)S(0.771)PRPT(0.002)AEK;S(0.264)S(0.735)PRPTAEK 96.604 0.005682199999999999 2324900000.0 3067210.0 2881040.0 2656600.0 2666690.0 2803440.0 2764050.0 2890480.0 2854830.0 3230890.0 2777720.0 True False 2897065.7469684565 2742630.5138707943 2827848.686710292 2920131.4158304143 3024054.778608359 2746798.538677713 3182677.92676631 2844927.261052329 2644241.8201089543 2753111.5618334576 1.0522878139522729 0.9961930173451877 1.0271464207672945 1.0606658503463362 1.098413453537809 0.9977069497497804 1.1560294071943742 1.03334979246454 0.9604557464238752 1.0 21.39263164145991 -3.896383614110042 19.789964112107697 1.0415198463297595 2.2640375859570985 0.00025211828156268545 0.05409123242933117 5958.558694437151 1231553.2930346234 0.013026314820818629 27033.80208995186 0.0001269452297374044 3.896383614110042 1.222517739627339 SS(ph)PRPTAEKK ddPTM_KYSE-520_SHP099_60min_R1 3 SSPRPTAEKK 10 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 S(0.365)S(0.635)PRPTAEKK;S(0.405)S(0.595)PRPTAEKK;S(0.115)S(0.885)PRPTAEKK 121.56 0.00037678 5676600000.0 4684900.0 4080470.0 3395730.0 3165370.0 3882240.0 3935350.0 3236970.0 3245660.0 4678980.0 4426800.0 True False 4425019.257883391 3884438.0962896636 3614624.189160098 3466205.813096806 4187750.201076005 3910788.020906036 3564194.517382837 3234401.563002738 3829395.1794871977 4387581.995998283 1.0085325498006084 0.885325470802024 0.8238305728432733 0.7900036549193102 0.9544551429227909 0.8913310393909197 0.8123368453589196 0.737171764756235 0.8727803111098135 1.0 22.064994656362963 -6.749680755897894 24.39727245253987 0.8336698789141677 0.8870022901088552 0.01570593622776173 0.08467748510185039 454.0339927238475 942048.9947980384 0.03266988226124634 0.025080147446524433 1.7795870801674437e-07 6.749680755897894 0.05333241119468757 SS(ph)PSARPPDVPGQQPQAAK ddPTM_KYSE-520_SHP099_60min_R1 4 SSPSARPPDVPGQQPQAAK 19 1 A0A0A6YYC7;Q96JP5-2;Q96JP5 A0A0A6YYC7 ZFP91-CNTF;ZFP91 E3 ubiquitin-protein ligase ZFP91 1 S(0.015)S(0.985)PSARPPDVPGQQPQAAK;S(0.133)S(0.867)PSARPPDVPGQQPQAAK;S(0.187)S(0.813)PSARPPDVPGQQPQAAK;S(0.227)S(0.772)PS(0.002)ARPPDVPGQQPQAAK 241.79 5.981299999999999e-26 6847300000.0 3758850.0 3187020.0 3137400.0 3139170.0 3097620.0 3193850.0 3033770.0 3334590.0 3318720.0 2940600.0 True False 3550339.0974182994 3033910.7753854496 3339641.8240174893 3437515.772974124 3341385.070953122 3173915.9974514996 3340453.078341946 3323023.0855891556 2716124.106123076 2914548.5717521785 1.2181437399356478 1.04095392500579 1.1458521763491325 1.1794333456270198 1.1464502953691853 1.0889905998524476 1.1461305228252623 1.1401501823630302 0.9319193141770792 1.0 21.4748410140779 -7.755348332592096 24.999370488486985 0.965959631900701 1.1355375249602009 0.6779199260321842 0.04747607122172222 71.77292448888232 294585.5788281929 0.03253584311424405 0.011589944945140268 1.75651420948525e-08 7.755348332592096 0.16957789305949988 SS(ph)PSDTRPK ddPTM_KYSE-520_SHP099_60min_R1 4 SSPSDTRPK 9 1 Q5JRC6;A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q8IWS0-4;Q8IWS0-2 Q5JRC6 PHF6 PHD finger protein 6 1 S(0.429)S(0.57)PS(0.001)DTRPK;S(0.174)S(0.823)PS(0.003)DTRPK;S(0.127)S(0.861)PS(0.01)DT(0.002)RPK;S(0.119)S(0.825)PS(0.056)DTRPK 160.81 0.00021991 42644600000.0 4558720.0 3375760.0 3049860.0 3963720.0 3657270.0 3995200.0 4494380.0 3735190.0 4005860.0 4260960.0 True False 4305838.714016985 3213583.422480937 3246458.8555485373 4340430.757064125 3945076.341980202 3970264.474855809 4948715.791321839 3722233.4976898977 3278496.8035128517 4223211.209376721 1.0195650893464214 0.7609336268443962 0.7687180902391247 1.027756023053534 0.9341413787738153 0.9401055921713556 1.1717897935898383 0.8813751700188446 0.776304248348665 1.0 22.00990896969586 -5.263652046796985 24.99844496630178 0.9634095224939482 0.8408584053811617 0.16111440853091852 0.11643353147024223 344.0113552761035 3886610.977312737 0.03326457864259034 0.0521784787505605 5.4493907874180595e-06 5.263652046796985 -0.12255111711278643 SS(ph)PSKCPSLDDR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPSKCPSLDDR 12 1 P38398;P38398-4;P38398-8;P38398-7;E7EUM2;P38398-5;H0Y8B8;B7ZA85;P38398-3;P38398-6;A0A2R8Y7V5 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 S(0.169)S(0.818)PS(0.013)KCPSLDDR;S(0.173)S(0.825)PS(0.002)KCPSLDDR 128.22 0.00012535 819760000.0 625590.0 577500.0 598830.0 479320.0 584460.0 553450.0 451470.0 533870.0 693040.0 513770.0 True False 590887.2756172523 549756.0331548275 637431.5399618775 524874.4286871877 630453.6768774933 549995.713258147 497108.9935225926 532018.1295761953 567201.4061166759 509218.3975070119 1.16038084741256 1.0796075629754862 1.251784191385387 1.0307452190589015 1.2380811061894361 1.0800782453084359 0.97621962591355 1.0447739755295653 1.1138666805707185 1.0 18.957925017620816 -6.515225184124516 24.774826540381785 1.0361180388472808 1.148104659919123 0.3930510392574281 0.06962263330877255 337.75524111330657 1093331.5132337003 0.024378718382513348 0.01973556344429175 3.053337530069281e-07 6.515225184124516 0.1119866210718421 SS(ph)PSLAK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPSLAK 7 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7 E9PFQ4;REV__P49792 PHLDB2 Pleckstrin homology-like domain family B member 2 1 S(0.136)S(0.864)PSLAK 97.431 0.005797699999999999 569830000.0 2338000.0 2039700.0 1938700.0 1974400.0 1966800.0 2113100.0 2129600.0 2024800.0 2557100.0 2188200.0 True False 2208306.4793125507 1941709.7503478841 2063671.7040296763 2162046.382374995 2121575.970438788 2099911.359085356 2344880.7508931137 2017776.441391874 2092795.0992452882 2168814.250393841 1.018209133821183 0.8952863298437308 0.951520723203902 0.9968794616608513 0.9782193058043239 0.9682301555811095 1.0811809957755951 0.9303592693682553 0.9649489802389724 1.0 21.048475067004258 -5.2474214888335 18.11169151489048 0.9882268305810379 0.9490331736014925 0.0972697701018771 0.045743532875627164 44.69205701199889 57735.35975636434 0.012290763560633374 0.02098115539514643 5.656900125181157e-06 5.2474214888335 -0.039193656979545355 SS(ph)PSVKPAVDPAAAK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPSVKPAVDPAAAK 15 1 Q6FI81-3;Q6FI81;H3BPG7;H3BV90;H3BT65 Q6FI81-3 CIAPIN1 Anamorsin 1 S(0.289)S(0.711)PS(0.001)VKPAVDPAAAK;S(0.151)S(0.849)PSVKPAVDPAAAK 174.78 1.3465e-08 6747800000.0 8712000.0 7793200.0 7903600.0 6784300.0 7642500.0 7197100.0 7589300.0 8310300.0 9196200.0 7090400.0 True False 8228727.993058565 7418802.97416832 8413078.702207115 7429077.832225827 8243921.270123261 7152180.2292713085 8356500.508430262 8281473.508938595 7526401.897336626 7027584.572247721 1.1709183871730577 1.055668971023919 1.1971508298072682 1.057131046357467 1.1730803358352901 1.0177295137102471 1.1890999563961842 1.1784238843090615 1.0709799106593123 1.0 22.74459747989752 -8.012496498569238 8.300856922734914 1.0000034511809879 1.1268436967242255 0.30878768850578375 0.06114947655794506 0.18244424670250844 100.73436548945222 0.055092436055281156 0.01424496329373061 9.716357852057962e-09 8.012496498569238 0.12684024554323758 SS(ph)PTQETQAPFIAK ddPTM_KYSE-520_SHP099_60min_R1 5 SSPTQETQAPFIAK 14 0 O15231-5 O15231-5 ZNF185 Zinc finger protein 185 1 S(0.015)S(0.985)PTQETQAPFIAK;S(0.004)S(0.996)PTQETQAPFIAK;S(0.245)S(0.753)PT(0.002)QETQAPFIAK;S(0.005)S(0.995)PTQETQAPFIAK;S(0.113)S(0.887)PTQETQAPFIAK 332.7 1.1949000000000002e-59 4798580000.0 8146090.0 7460490.0 6543160.0 5865280.0 6282090.0 7435760.0 6352630.0 7520660.0 8521370.0 7273230.0 True False 7694210.148872174 7102076.861976209 6964942.563026158 6422714.447739272 6776454.742797332 7389350.663684876 6994815.83609415 7494572.5857952405 6974104.014256696 7208794.840687314 1.0673365408382989 0.9851961415091499 0.9661729480377463 0.8909553662824043 0.9400260227340911 1.0250466030713599 0.9703169518175992 1.0396429294248968 0.967443819443162 1.0 22.781326660594573 -6.263630450027897 24.996313869648365 1.0010819236954962 0.9661880845722187 0.09690402560293077 0.0459098749706594 499.0519302544728 5693266.725664374 0.016711338385521666 0.015487412338909178 5.449661783633095e-07 6.263630450027897 -0.03489383912327748 SS(ph)PTSASACGAQGLR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPTSASACGAQGLR 15 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;H0YHA8;A0A2R8YFX5 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.285)S(0.7)PT(0.009)S(0.005)ASACGAQGLR;S(0.218)S(0.78)PT(0.002)S(0.001)ASACGAQGLR 83.169 0.005128 1071950000.0 812390.0 790610.0 752960.0 754120.0 717970.0 797780.0 665530.0 774040.0 809890.0 810070.0 True False 767325.1072406849 752627.9088701966 801497.0063785963 825791.3380655536 774470.1543095062 792800.7590985347 732808.2673468696 771355.0359022948 662834.3916654661 802893.4100249234 0.9556998446616539 0.9373945525930192 0.9982607857669629 1.0285192626502182 0.9645989674836977 0.98742965031177 0.9127092814525926 0.9607191020266942 0.8255571454309115 1.0 19.614848946568568 -6.761061580725486 24.999999193247533 0.9214729669767157 0.9792946750712272 0.23654782199907454 0.04728705369025788 14.27434422531603 944676.3400299663 0.01840905160469561 0.013358234197698732 1.7335581706870264e-07 6.761061580725486 0.05782170809451159 SS(ph)PVCSTAPVETEPKLS(ph)PSWNPK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPVCSTAPVETEPKLSPSWNPK 23 1 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 2 S(0.445)S(0.555)PVCSTAPVETEPKLS(0.958)PS(0.042)WNPK 164.03 1.5367e-10 1096500000.0 955740.0 953750.0 798390.0 705790.0 830110.0 780140.0 792820.0 693310.0 1104400.0 760090.0 True False 902723.1969795439 907930.4183920645 849855.496869166 772868.069396498 895434.9343201859 775270.8568817602 872965.9827775538 690905.0694297705 903868.7996583997 753356.1939410724 1.1982687661424536 1.2051807972034578 1.128092532727808 1.0258999336732761 1.1885943747748982 1.029089377796238 1.1587692379759438 0.9171027927910195 1.1997894315170392 1.0 19.522972620515617 -1.0000000000000788 0.2512003198935265 1.0359527960704762 2.1923839037377286 0.2575207012711175 0.08463809544535938 65.14775274814802 0.8873269061398309 0.10131395533004744 31.892167247934854 0.09999999999998185 1.0000000000000788 1.1564311076672524 SS(ph)PVESLKK ddPTM_KYSE-520_SHP099_60min_R1 4 SSPVESLKK 9 1 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2;B1AKL5 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 SS(1)PVESLKK;S(0.12)S(0.88)PVESLKK;S(0.481)S(0.519)PVESLKK;S(0.021)S(0.979)PVESLKK 157.68 0.00010905 7862770000.0 10280960.0 8849600.0 8542060.0 8376070.0 8750600.0 8975720.0 8524190.0 8685700.0 10347840.0 8364240.0 True False 9710654.654214354 8424451.932479586 9092694.85537924 9172129.174442722 9439222.435896723 8919699.202105723 9385898.313277401 8655571.333957616 8468933.10381852 8290139.340880249 1.1713499924336948 1.0162014878250618 1.0968084469390567 1.106390230283973 1.138608417514785 1.0759408057378477 1.1321761827323886 1.044080319769217 1.021567039537756 1.0 22.98296492010521 -7.479215861826925 3.6208228590651927 1.0138501703531242 1.1016965401539098 0.49372369299092334 0.03940588995116601 0.20513057237268856 5.45889114375951 0.02593705420848389 0.010199298285744311 3.317295336471133e-08 7.479215861826925 0.08784636980078564 SS(ph)PVGGGPR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPVGGGPR 9 0 Q00587-2;Q00587 Q00587-2 CDC42EP1 Cdc42 effector protein 1 1 S(0.18)S(0.82)PVGGGPR;S(0.203)S(0.797)PVGGGPR 138.08 0.00044883 951390000.0 1162520.0 1104090.0 1012930.0 956460.0 1001300.0 967800.0 921470.0 918090.0 1272130.0 964240.0 True False 1098032.6981738352 1051047.8591271231 1078225.088545304 1047361.6708298163 1080096.6133823255 961759.6012128183 1014621.1802805592 914905.3600738173 1041143.2597876131 955697.5837673679 1.1489332157201666 1.099770342605538 1.1282074024870208 1.0959132769815194 1.1301656839233345 1.0063430289543622 1.0616550648594445 0.9573168077575887 1.089406604632626 1.0 19.86619464554948 -6.259740767917648 24.999186219573 1.0226960224761459 1.118492268582608 0.6461635167325311 0.036114688065226205 92.88038841158217 1366962.8356754954 0.01127834741846276 0.01071882977512497 5.498689948826954e-07 6.259740767917648 0.09579624610646209 SS(ph)PVKKPSLLK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPVKKPSLLK 11 2 O60318 O60318 MCM3AP Germinal-center associated nuclear protein 1 S(0.1)S(0.9)PVKKPSLLK 126.48 0.00011159999999999999 2761000000.0 5585400.0 4886800.0 4284300.0 5572600.0 4815300.0 4886900.0 4348100.0 5241100.0 5231900.0 4068800.0 True False 5275566.727781138 4652030.792763657 4560472.833122371 6102218.228536724 5194236.71469082 4856399.044396487 4787648.381366612 5222919.8473819345 4281918.845466115 4032753.5974784982 1.3081797834312803 1.1535618728782153 1.1308582889799743 1.5131641646422858 1.2880124185962034 1.204238971464306 1.1871909021072145 1.2951249614277436 1.061785388560166 1.0 21.943333828637094 -7.863433218050727 4.445830717908188 1.0040480664083435 1.2571874854605443 0.4464083185651685 0.10276670128057366 0.19957233123139193 6.358653198624602 0.10260633193201986 0.027083278288365608 1.3695149640516439e-08 7.863433218050727 0.2531394190522007 SS(ph)PVKVGEK ddPTM_KYSE-520_SHP099_60min_R1 3 SSPVKVGEK 9 1 P49916-4;P49916-3;P49916-2;P49916 P49916-4 LIG3 DNA ligase 3 1 S(0.137)S(0.863)PVKVGEK;S(0.399)S(0.601)PVKVGEK;S(0.443)S(0.557)PVKVGEK 129.34 0.00038856 4292300000.0 5673000.0 5774900.0 5614500.0 4675900.0 5334200.0 4696500.0 4372020.0 4063170.0 7028300.0 4503290.0 True False 5358307.381154872 5497465.135698384 5976419.653517624 5120296.130139406 5753971.192553686 4667187.401421776 4813986.448403325 4049075.8116210056 5752137.8890249245 4463394.354106608 1.2005005509371778 1.2316781130128833 1.3389853504696345 1.1471753835572263 1.2891469442442756 1.045658759040116 1.0785483124461432 0.907174112432077 1.2887362022431628 1.0 22.08970984792375 -6.268274363251858 24.41883334944881 1.059129649459005 1.2411276611221589 0.43453056936419854 0.10115008276181964 363.681225758725 1299292.800261097 0.0333230366993388 0.030058819992874252 5.391698971575853e-07 6.268274363251858 0.18199801166315388 SS(ph)PVLQHK ddPTM_KYSE-520_SHP099_60min_R1 5 SSPVLQHK 8 0 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.303)S(0.697)PVLQHK;S(0.027)S(0.973)PVLQHK;S(0.294)S(0.706)PVLQHK;S(0.004)S(0.996)PVLQHK;S(0.264)S(0.736)PVLQHK 164.48 0.00012261 30498400000.0 27472400.0 26276900.0 24556300.0 24517700.0 26090900.0 24841000.0 24547700.0 24380100.0 28408600.0 23394800.0 True False 25948451.20712833 25014518.28156898 26139238.389469184 26847854.83648468 28144105.39308588 24685958.104698926 27029221.0784649 24295531.12345812 23250314.36252775 23187540.272878993 1.1190687283669585 1.078791367570233 1.1272967327216938 1.1578569576820068 1.2137598495517987 1.064621681048789 1.1656786688184981 1.047783888999864 1.0027072336655811 1.0 24.466846451667127 -7.457052091186665 3.6931596067164487 1.004998924227661 1.1315180569932624 0.6427470274631671 0.04034170811612038 0.15474979293075827 4.082497682501298 0.0273893904673642 0.011141578565918653 3.4909844056783986e-08 7.457052091186665 0.12651913276560145 SS(ph)PVNRPSSATNK ddPTM_KYSE-520_SHP099_60min_R1 8 SSPVNRPSSATNK 13 1 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80 Q96L91-4 EP400 E1A-binding protein p400 1 S(0.142)S(0.858)PVNRPSSATNK;S(0.204)S(0.796)PVNRPSSATNK;S(0.126)S(0.874)PVNRPSSATNK;S(0.17)S(0.83)PVNRPSSATNK;S(0.158)S(0.842)PVNRPSSATNK;S(0.144)S(0.856)PVNRPSSATNK;S(0.216)S(0.783)PVNRPS(0.001)SATNK;S(0.434)S(0.559)PVNRPS(0.007)S(0.001)ATNK 143.98 1.5447e-05 8592420000.0 7084400.0 6648140.0 5944900.0 6177120.0 6509860.0 5745690.0 6128110.0 6223660.0 7193970.0 6124730.0 True False 6691414.20959872 6328753.37533841 6328117.766176312 6764191.62758115 7022148.945963306 5709829.017454518 6747599.163390117 6202071.576073163 5887726.393225766 6070469.657167834 1.1022893758636438 1.0425475676112805 1.042442862506405 1.1142781381987783 1.1567719373527807 0.9405909822335604 1.1115448300483222 1.0216790341336996 0.9698963549342035 1.0 22.533376707857066 -7.499127740685443 5.6384284063987264 0.9874366332967576 1.0702942075150685 0.29340517406607425 0.055666679328525925 0.2214682968799308 22.93933490751152 0.03387535292761492 0.014524386541985996 3.168635323220979e-08 7.499127740685443 0.08285757421831097 SS(ph)PVPPVPER ddPTM_KYSE-520_SHP099_60min_R1 3 SSPVPPVPER 10 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 S(0.033)S(0.967)PVPPVPER;S(0.243)S(0.757)PVPPVPER;S(0.01)S(0.99)PVPPVPER 197.94 1.8187e-06 6585800000.0 3610730.0 3361620.0 3070730.0 2568000.0 3068480.0 3251250.0 3074150.0 2989610.0 3742740.0 3053090.0 True False 3410435.609088193 3200122.729305507 3268674.169141718 2812061.9479026455 3309951.9187370394 3230957.7427600487 3384915.0828127633 2979239.7406902188 3063152.7627974297 3026041.9978680788 1.127028511663397 1.0575275331803302 1.0801813627981964 0.9292871512965822 1.0938222011026226 1.0677174160293672 1.1185948791185052 0.9845335070660508 1.012263797050899 1.0 21.52900057991106 SS(ph)PVRPSSEK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPVRPSSEK 10 1 B3KV94;A0A3B3ISE6;A0A3B3ITA8;A0A3B3ITJ7;A0A3B3ITE7;A0A3B3IT25;A0A3B3IS40;Q9UGL1;Q9UGL1-2 B3KV94 KDM5B Lysine-specific demethylase 5B 1 S(0.25)S(0.749)PVRPS(0.001)SEK;S(0.056)S(0.944)PVRPSSEK 95.49799999999999 0.004428499999999999 445870000.0 980130.0 787360.0 735530.0 817460.0 861000.0 821620.0 804670.0 822560.0 941780.0 783650.0 True False 925760.2350592852 749534.0437485456 782943.4406896106 895151.1526216894 928755.801580128 816491.9648155363 886013.8964224086 819706.7313469473 770776.4923418044 776707.4706704739 1.1919033484513097 0.9650145930765008 1.0080287241395447 1.1524945831266074 1.195760098429853 1.0512219795062863 1.1407304936279017 1.0553609464311644 0.9923639483941751 1.0 19.56701181685719 -7.596862157119345 3.856996091642535 0.9972898425172392 1.09596842087548 0.2502798402027576 0.07169499845504619 0.35964443705768656 10.30832470376678 0.05749977077558596 0.019564382963770274 2.530100910301714e-08 7.596862157119345 0.0986785783582409 SS(ph)PVTVNQTDKEK ddPTM_KYSE-520_SHP099_60min_R1 3 SSPVTVNQTDKEK 13 1 Q8IVL0-3;Q8IVL0-2;Q8IVL0;H0YHA8;A0A2R8YFX5 Q8IVL0-3 NAV3 Neuron navigator 3 1 S(0.028)S(0.972)PVTVNQTDKEK;S(0.11)S(0.89)PVTVNQTDKEK;S(0.058)S(0.942)PVTVNQTDKEK 195.46 1.1231e-08 7875900000.0 6603600.0 6373300.0 6175900.0 6377800.0 7123200.0 6489900.0 6036200.0 7230100.0 8511500.0 7216600.0 True False 6237285.144049759 6067117.101481664 6574008.395789384 6983944.194444502 7683755.314536084 6449394.126793829 6646398.00363496 7205020.47061803 6966026.157454249 7152666.538429845 0.8720223584502471 0.84823150483589 0.9190989626691742 0.9764112666124121 1.0742504593570532 0.9016768910087624 0.9292196089283898 1.0073194985264444 0.9739061817054081 1.0 22.77004975311622 -5.021898478304314 2.965988409832074 0.9788968398992538 0.8606509730139039 0.5490449757037938 0.04385646244851559 0.2026896556006382 3.596467596150073 0.012848405978519866 0.02796258632613046 9.508270352350554e-06 5.021898478304314 -0.11824586688534988 SS(ph)PYGTLKPEEMSGPGLAEPK ddPTM_KYSE-520_SHP099_60min_R1 1 SSPYGTLKPEEMSGPGLAEPK 21 1 Q5JSZ5;Q5JSZ5-5;A0A494C0D3;H0Y412;A0A494C065 Q5JSZ5 PRRC2B Protein PRRC2B 1 S(0.034)S(0.966)PYGTLKPEEMSGPGLAEPK 211.98 4.3593999999999995e-19 1465900000.0 337330.0 336420.0 269750.0 313610.0 258200.0 260980.0 319800.0 356220.0 373780.0 332280.0 True False 318617.6324493167 320257.8782232853 287138.5166152601 343415.4001097153 278518.87104296044 259351.12701438417 352128.5049472287 354984.3559623727 305910.97422701656 329336.2577099284 0.9674538560219736 0.9724343151593132 0.8718703449535306 1.042750052780971 0.8456975644882481 0.7874964293874213 1.069206613920339 1.0778781493139895 0.9288712283129655 1.0 18.329201826147713 -6.80031248942588 24.999899535296652 1.0254788688535377 0.917993267366329 0.30158090395071824 0.07745834918606517 211.56507262906527 136058.94545773274 0.03338648542839698 0.022509604381714256 1.5837532188988843e-07 6.80031248942588 -0.10748560148720865 SS(ph)QPLASK ddPTM_KYSE-520_SHP099_60min_R1 2 SSQPLASK 8 0 P17096;P17096-3;A0A669KAX1;A0A1W2PRV2;P17096-2 P17096;P17096-2 HMGA1 High mobility group protein HMG-I/HMG-Y 1 S(0.168)S(0.832)QPLASK;S(0.066)S(0.934)QPLASK 108.98 0.0011893 1638270000.0 3621400.0 3184600.0 3050800.0 3204600.0 3508700.0 3407900.0 3652800.0 3573400.0 3879400.0 3556500.0 True False 3420513.7229180806 3031607.0358179444 3247459.449452587 3509164.2205018736 3784814.7282278673 3386630.032003677 4022060.671892543 3561004.7094378327 3174998.7517156824 3524992.176915132 0.9703606564913047 0.8600322734534493 0.9212671366251299 0.995509789633885 1.0737086887778902 0.9607482405726808 1.1410126519521573 1.0102163439563197 0.9007108646959485 1.0 21.749188625037515 -5.300281883960707 3.8028364666182015 1.0194685432062265 0.9099645653071914 0.3080054698218603 0.06483158688646952 0.25251045917964504 7.848053881186853 0.018590955069659316 0.030056162411268506 5.008620376838805e-06 5.300281883960707 -0.1095039778990351 SS(ph)RFSGGFGAR ddPTM_KYSE-520_SHP099_60min_R1 1 SSRFSGGFGAR 11 1 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;A0A2R8Y7T2;A0A087WVZ1 A0A0D9SG12 DDX3X ATP-dependent RNA helicase DDX3X 1 S(0.032)S(0.592)RFS(0.376)GGFGAR 92.99 0.0040413 633820000.0 791510.0 982680.0 871780.0 684330.0 784940.0 671170.0 640100.0 668800.0 1062600.0 716370.0 True False 747603.362463934 935470.5777672495 927976.3336973175 749368.517448683 846710.3123023307 666980.9790721298 704807.5547739862 666480.088899094 869658.6259661498 710023.5191274269 1.0529276035569783 1.3175205504697682 1.3069656267692944 1.0554136549865398 1.1925102331016908 0.9393787122598508 0.992653814679476 0.9386732565114957 1.2248307310086068 1.0 19.43750728830276 -5.793520717514345 1.5897746434600264 1.0193150993430977 1.223153313967688 0.3218306714619513 0.11404941188700544 0.41100022476470965 2.155750034106442 0.041583573126239504 0.05475664556691171 1.6087156341456015e-06 5.793520717514345 0.20383821462459029 SS(ph)RGQEEISGALPVASPASSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSRGQEEISGALPVASPASSR 21 1 H0Y9D5;H0Y8S9;Q9UBK8;Q9UBK8-1 H0Y9D5 MTRR Methionine synthase reductase 1 S(0.235)S(0.754)RGQEEIS(0.001)GALPVAS(0.01)PASSR 184.91 7.138e-13 952000000.0 492760.0 556610.0 509690.0 459660.0 501380.0 469540.0 466550.0 452880.0 600480.0 530970.0 True False 465425.62050729326 529869.6201113565 542545.4329328336 503345.948198182 540835.7535380317 466609.4266929805 513713.4270892102 451309.0649829861 491447.9688689563 526266.0188884097 0.8843923107374008 1.006847489850396 1.0309338119128604 0.9564477472084555 1.0276851138524894 0.8866417552069253 0.9761478200213014 0.8575683186542249 0.9338394485492397 1.0 19.005432717141527 -6.264669788052157 24.98297742845115 0.9247692617783368 0.9840638032891467 0.17129813119066795 0.0544675414215904 440.9422638987085 3410093.9738835962 0.018111453318166642 0.016615525001174355 5.43663544123112e-07 6.264669788052157 0.05929454151080982 SS(ph)RS(ph)SPELTR ddPTM_KYSE-520_SHP099_60min_R1 1 SSRSSPELTR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.08)S(0.918)RS(0.606)S(0.395)PELTR 112.02 0.0059058999999999995 1544400000.0 1584000.0 1368300.0 1464400.0 1469400.0 1430400.0 1541700.0 1521200.0 1586400.0 1823000.0 1497800.0 True False 1496132.3623742855 1302564.814139829 1558797.5671228424 1609051.3342087802 1542964.3421373013 1532077.6784354213 1674977.7414813126 1580897.1486685448 1491989.1540902434 1484530.6572707677 1.0078150660255456 0.8774253382779758 1.0500271984875076 1.0838788180817613 1.0393617232357875 1.0320283188035109 1.128287740827577 1.0649137765702608 1.0050241446904085 1.0 20.501575456273404 -4.831326763527037 9.599653945412301 1.0558826514427542 0.9428523659144292 0.46441227072591806 0.04602885821609146 0.2396832213872443 30.808272909831434 0.011592412355267805 0.024231189622507938 1.4745966280600582e-05 4.831326763527037 -0.11303028552832495 SS(ph)S(ph)FKDFAKSK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSFKDFAKSK 11 2 O75995 O75995 SASH3 SAM and SH3 domain-containing protein 3 2 S(0.047)S(0.953)S(0.937)FKDFAKS(0.063)K 57.106 0.029963999999999998 853840000.0 840910.0 716300.0 666280.0 1021100.0 988570.0 833910.0 947680.0 1119800.0 1112200.0 840140.0 True False 794263.0459874744 681887.8728117808 709229.4748856928 1118145.036995092 1066364.8348061172 828705.2583667923 1043480.7428655071 1115915.675163286 910252.5162803981 832697.0132190299 0.9538439953291319 0.8188907393527773 0.8517257341226219 1.342799384703664 1.280615659570793 0.9952062337334365 1.253133764502928 1.340122106178084 1.0931377221608556 1.0 19.66743212363875 -5.247205263795277 24.523994647783365 1.1993384309885828 0.869227163210389 0.5704693972246484 0.12352548689383566 424.4608399136174 731302.8721228709 0.033326528168323 0.057352797894065465 5.659717264333294e-06 5.247205263795277 -0.3301112677781939 SS(ph)S(ph)SQTLTQFDSNIAPADPDTAIVHPVPIR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSQTLTQFDSNIAPADPDTAIVHPVPIR 30 0 Q96D71;Q96D71-3;H0YE73 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 2 S(0.504)S(0.577)S(0.729)S(0.178)QT(0.012)LTQFDSNIAPADPDTAIVHPVPIR 128.11 6.5113e-05 148420000.0 21723.0 19547.0 18714.0 8305.8 12019.0 8922.2 0.0 15888.0 22814.0 12277.0 True False 20517.9818862731 18607.932779354844 19920.334383458678 9095.180734770176 12964.826921244556 8866.51324027796 0.0 15832.888236287074 18671.55269413865 12168.235331361473 1.686192067093873 1.5292219679049261 1.6370766870457822 0.7474527314021415 1.0654648408902816 0.7286605657129338 0.0 1.3011655186747257 1.534450327897261 1.0 13.570832339442536 -5.256121878625472 24.67271506437258 0.8844530320480831 1.6086694778349935 0.4132677072938271 0.38479714118633046 384.6496853246478 1784732.148867845 0.11286772867401369 0.1882711944666061 5.544700869065217e-06 5.256121878625472 0.7242164457869104 SS(ph)SDEQGLSYSSLK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSDEQGLSYSSLK 14 0 Q9NPH3 Q9NPH3 IL1RAP Interleukin-1 receptor accessory protein 1 S(0.01)S(0.495)S(0.495)DEQGLSYSSLK 196.8 5.8818e-11 387330000.0 203880.0 216460.0 168170.0 258340.0 253710.0 244920.0 248490.0 301270.0 337310.0 212440.0 True False 192570.36997529626 206060.93668691587 179010.50728151354 282892.5559272468 273675.5335875661 243391.36343153904 273609.79422869545 300224.96468694624 276063.0068931317 210557.94687581924 0.9145718451028994 0.978642410530553 0.8501721732074475 1.3435377772470793 1.2997634981166097 1.1559352997257517 1.299451283071554 1.425854350983057 1.3111022926906928 1.0 17.683857801152453 -5.262005997465563 24.9990812073648 1.278664086407655 0.9208801577743222 0.6615759280324714 0.11353195488237247 28.55104628398792 1259691.8099467074 0.03082170519998639 0.04900445502814864 5.4700840883357285e-06 5.262005997465563 -0.35778392863333286 SS(ph)SDMDLQKK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSDMDLQKK 10 1 A0A0U1RQE4;A0A494C1M0;Q5HYK7-3;Q5HYK7-2;Q5HYK7 A0A0U1RQE4 SH3D19 SH3 domain-containing protein 19 1 S(0.029)S(0.556)S(0.415)DMDLQKK 65.234 0.021456 0.0 473600.0 483210.0 391730.0 379660.0 405910.0 481270.0 325040.0 324370.0 541170.0 420390.0 True False 447328.4639018069 459995.86628700315 416981.5425901613 415742.7722510589 437852.8076880258 478266.2154119577 357898.21528469987 323244.8361785275 442907.16978552716 416665.67165847134 1.0735908771204674 1.1039927154451263 1.0007580920463948 0.9977850361328329 1.050849247899935 1.1478416580571547 0.858957767891324 0.7757894594289539 1.062979745901806 1.0 18.668530718302133 -6.771512572461751 24.99909661670822 0.9057475164734307 1.0580835484496798 0.3869277259464945 0.08370365992046032 201.97230729005682 501238.6547961001 0.03463182486210036 0.023653963394414113 1.6923392519224017e-07 6.771512572461751 0.15233603197624912 SS(ph)SESLIFSGNQGR ddPTM_KYSE-520_SHP099_60min_R1 7 SSSESLIFSGNQGR 14 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 S(0.184)S(0.812)S(0.004)ESLIFSGNQGR;S(0.112)S(0.887)S(0.001)ESLIFSGNQGR;S(0.16)S(0.838)S(0.002)ESLIFSGNQGR;S(0.17)S(0.829)SESLIFSGNQGR;S(0.197)S(0.763)S(0.04)ESLIFSGNQGR;S(0.02)S(0.98)S(0.001)ESLIFSGNQGR;S(0.176)S(0.823)SESLIFSGNQGR 183.0 7.797500000000001e-09 2216780000.0 2399239.0 2349058.0 2237470.0 2544322.0 2474319.0 2210104.0 2133885.0 2597411.0 3005934.0 2165996.0 True False 2266148.429905631 2236205.727672056 2381700.8962785774 2786133.5979016973 2669033.828350684 2196309.9211395457 2349598.9205106865 2588401.1874812865 2460132.159029673 2146806.960559391 1.0555902191201874 1.0416426668792662 1.109415490090446 1.297803504967078 1.2432574876947562 1.0230588783666212 1.0944621308189042 1.2056981531338196 1.1459494049658936 1.0 21.03376104018345 -11.456743823624624 1.888437580851734 2.369902030481056e-05 1.1372344986625667 0.18312390114670596 0.08557426272371292 2266343.510393581 165350.77774631325 9685281.80450548 0.02372049345804624 3.493463228969802e-12 11.456743823624624 1.1372107996422618 SS(ph)SKESLVR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSKESLVR 9 1 E7EVX2;Q13439-3;Q13439-4;Q13439;Q13439-5;Q86W71 E7EVX2 GOLGA4 Golgin subfamily A member 4 1 S(0.047)S(0.475)S(0.475)KES(0.003)LVR;S(0.185)S(0.407)S(0.407)KESLVR 109.24 0.00065709 19849400000.0 8349900.0 7386700.0 7293500.0 7060000.0 7043100.0 7051500.0 6809400.0 7368700.0 8732000.0 6184900.0 True False 7886714.401887027 7031831.844337257 7763650.680012597 7730980.277333608 7597351.900242749 7007488.972878884 7497760.605339777 7343139.699567513 7146488.915806901 6130106.597779386 1.2865542019683585 1.1470978085249803 1.2664789031278767 1.2611494031986548 1.2393506995449097 1.143126772936922 1.2231044412923944 1.1978812411235304 1.1658017363671451 1.0 22.547480730801496 -11.440976481506477 0.23487691345622957 0.6859629096221327 1.2475289253242745 0.717727228765914 0.04265510408083948 22.161054749628022 0.6452255927017841 3.6581097908258866 0.07620543324967621 3.6226261561343626e-12 11.440976481506477 0.5615660157021418 SS(ph)SLGNLKK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSLGNLKK 9 1 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;H0YGH8;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.181)S(0.712)S(0.107)LGNLKK 74.84100000000001 0.022269999999999998 2217600000.0 3850500.0 3646400.0 3141900.0 3217200.0 3313400.0 2835700.0 3046000.0 3224700.0 3800100.0 2958600.0 True False 3636905.0892185527 3471221.4706420107 3344431.9012177465 3522961.720713545 3574145.729332861 2818001.344450496 3353919.4060952445 3213514.268350638 3110097.6327253603 2932389.1057559703 1.2402532399536241 1.183752000656519 1.1405143657957875 1.2013964019298609 1.2188511143753706 0.9609916156485021 1.143749783925965 1.095868983431581 1.0606019598901684 1.0 21.483645120169264 -6.237432014416022 24.99745036183376 1.0639534768475167 1.1933313503226086 0.649163791923736 0.052808947598422036 552.4542219673068 575238.3244664946 0.017286347341511812 0.017278488736534495 5.78852596342867e-07 6.237432014416022 0.1293778734750919 SS(ph)SLKER ddPTM_KYSE-520_SHP099_60min_R1 1 SSSLKER 7 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 S(0.006)S(0.497)S(0.497)LKER 57.96 0.044078 682240000.0 1632700.0 1345700.0 1191700.0 1437300.0 1954400.0 2141600.0 2258000.0 1041000.0 1544600.0 2672200.0 True False 1542130.876293243 1281050.5520631194 1268518.888787417 1573900.5598599983 2108200.160985138 2128233.480013818 2486260.675956354 1037389.0139712275 1264139.5761973588 2648526.386940143 0.5822599630864449 0.4836842700076415 0.478952709341493 0.5942551932353349 0.7959898649228686 0.803553814116452 0.9387335871811889 0.39168536099416723 0.4772992190792655 1.0 21.336758451422963 -5.556746709206929 5.215292260590459 0.7172645207301808 0.5147494204999423 0.23927713782511906 0.17697373863808294 0.31052942991873933 21.579530021606683 0.05575083147032747 0.07422030350873157 2.7749380421630136e-06 5.556746709206929 -0.20251510023023844 SS(ph)SPALKPKPNPPS(ph)PENTASSAPVDWRDPSQMEK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPALKPKPNPPSPENTASSAPVDWRDPSQMEK 34 3 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 2 S(0.295)S(0.352)S(0.352)PALKPKPNPPS(0.971)PENT(0.009)AS(0.011)S(0.01)APVDWRDPSQMEK 192.27 4.3619999999999995e-15 735810000.0 207970.0 237450.0 215650.0 200740.0 214240.0 151730.0 163730.0 167250.0 249560.0 163540.0 True False 196433.48952208325 226042.5455802839 229551.14405219987 219818.26924531834 231099.469141146 150782.99678861428 180281.4262508123 166669.84878644365 204246.19489564488 162091.1628321948 1.2118704443217636 1.3945396012384397 1.4161854356603214 1.3561397512638345 1.4257376226018699 0.9302357645784347 1.1122224253363462 1.0282475976743344 1.260069897253382 1.0 17.306445912080008 -6.251714302583095 24.992574410095326 1.070799815764534 1.3655713067911495 0.6957995045011517 0.09739324054282389 380.80375531804185 978631.8746070695 0.03144331907340714 0.03106279322599446 5.601259550445233e-07 6.251714302583095 0.2947714910266155 SS(ph)SPELVTHLK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPELVTHLK 11 0 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.033)S(0.644)S(0.323)PELVTHLK;S(0.082)S(0.614)S(0.305)PELVTHLK 237.53 2.4163e-14 21020400000.0 11492300.0 10476800.0 9429400.0 9714100.0 9417700.0 9691900.0 10109800.0 9959200.0 11277100.0 9587700.0 True False 10854799.209667921 9973478.802002605 10037234.211573428 10637325.143349325 10158819.410616925 9631409.257072236 11131797.246139737 9924653.859694757 9229462.91255682 9502760.437117724 1.1422785285914545 1.0495349080932588 1.0562440543453093 1.1193931714620522 1.0690387785570852 1.0135380472659303 1.1714277466849532 1.0443969334351648 0.9712401963230173 1.0 23.179915229131428 -7.558641651469802 5.861587571357076 0.9903667177549388 1.0852165263941134 0.4581070075817911 0.04457207248895794 0.17053974745683897 15.870624771321454 0.029853490008003306 0.011159439391513055 2.7628566262699565e-08 7.558641651469802 0.09484980863917458 SS(ph)SPIPLT(ph)PSKEGSAVFAGFEGR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPIPLTPSKEGSAVFAGFEGR 23 1 Q8N5Y2;Q8N5Y2-3;Q8N5Y2-2;A0A3B3IT59;Q8N5Y2-6;Q8N5Y2-4;A0A3B3ITL5;A0A3B3ITF3;A0A3F2YNX2;A0A3B3IRN2 Q8N5Y2 MSL3 Male-specific lethal 3 homolog 2 S(0.314)S(0.343)S(0.343)PIPLT(0.963)PS(0.035)KEGS(0.002)AVFAGFEGR;S(0.31)S(0.345)S(0.345)PIPLT(0.99)PS(0.005)KEGS(0.005)AVFAGFEGR 78.45 0.0086444 686490000.0 1156590.0 1218140.0 1201770.0 1022650.0 1096350.0 1067780.0 931430.0 1090760.0 1619020.0 1078820.0 True False 1092431.6470949966 1159618.7259345842 1279238.0170999868 1119842.348529067 1182626.5076218052 1061115.5889471208 1025588.0342807921 1086976.4081452973 1325046.7801728926 1069262.4941092597 1.0216683490848875 1.084503321048958 1.1963741589623842 1.0473034962868892 1.1060207518145322 0.9923808183612336 0.9591545948080314 1.0165664784219277 1.2392156158780374 1.0 20.028184634227603 -6.237415835691558 24.128104377206938 1.0373545913854925 1.0942106278510515 0.08074460624186475 0.08297410823087921 1307.8101498761903 1313501.390411661 0.02807008595878293 0.028052527875244093 5.788741606764988e-07 6.237415835691558 0.056856036465559034 SS(ph)SPVTELASRS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPVTELASRSPIR 15 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.289)S(0.388)S(0.324)PVTELAS(0.157)RS(0.843)PIR 114.35 0.00011311 470720000.0 286750.0 289920.0 235720.0 218110.0 249590.0 240990.0 240160.0 219350.0 316750.0 248280.0 True False 270843.40587804664 275991.8080212078 250914.88836533527 238839.10882283733 269231.3130271593 239485.8920192982 264437.7165357298 218589.1260466749 259236.1846177096 246080.4323589171 1.1006295920474158 1.1215512154930867 1.0196458367700156 0.9705733468254069 1.094078511023078 0.9732016874466453 1.0745987155534493 0.8882832493070999 1.0534611880054094 1.0 17.908770417640792 -4.801522845413263 5.861129739015926 1.00737570716288 1.1113887296317142 0.3476273152306425 0.05587862651477598 0.1720163107791766 14.832804445253348 0.013900884781129105 0.030829894874322153 1.5793455264383202e-05 4.801522845413263 0.10401302246883426 SS(ph)SPVTELASRS(ph)PIRQDR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPVTELASRSPIRQDR 18 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.343)S(0.548)S(0.109)PVTELAS(0.286)RS(0.714)PIRQDR 131.33 1.1981e-05 524350000.0 85313.0 103070.0 113500.0 78926.0 76704.0 77522.0 71594.0 60250.0 110530.0 80165.0 True False 80580.5178227509 98118.36248877589 120816.39160642096 86427.10331003276 82740.16841393978 77038.1564426741 78831.42021010588 60041.006812455686 90460.53823455544 79454.8004674263 1.014168021928217 1.2348953356065755 1.52056755407688 1.0877518136297486 1.0413488917873548 0.9695846693902032 0.9921542782355108 0.7556624201337011 1.1385157058149193 1.0 16.277846765911555 -5.587685492369579 3.4287195700146316 0.970153040028697 1.2603894700248304 0.403762426593005 0.14624347419666225 0.2244636565424127 5.3463752778400195 0.04501998621085276 0.061276356296918806 2.5841308906014175e-06 5.587685492369579 0.2902364299961334 SS(ph)SSGSDDYAYTQALLLHQR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSGSDDYAYTQALLLHQR 20 0 F6SS63;Q8N5C8-2;Q8N5C8 F6SS63 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 1 S(0.107)S(0.441)S(0.441)S(0.009)GS(0.002)DDYAYTQALLLHQR 240.87 1.8899000000000004e-26 575710000.0 145390.0 183530.0 174990.0 115720.0 146610.0 177960.0 171390.0 164630.0 191920.0 211870.0 True False 137324.9268722205 174712.94331585368 186270.1353938995 126717.99400751319 158147.3729032087 176849.2856290897 188715.7738052078 164058.93695493104 157072.16590948935 209992.99663236592 0.6539500320224242 0.8319941432224194 0.8870302266318054 0.6034391433984724 0.7531078437824135 0.8421675411332845 0.8986765122247954 0.7812590876168528 0.74798763972341 1.0 17.67998168855566 -6.259618078533667 8.138069186043449 0.8432210334937028 0.7505304133829523 0.22767516301764357 0.09838671949937422 0.2239541797347662 170.69217620537236 0.034042806750154364 0.03210003472123711 5.500243563280172e-07 6.259618078533667 -0.09269062011075047 SS(ph)SSGSLNAR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSGSLNAR 10 0 H0Y7V5;Q7Z3E2 H0Y7V5 CCDC186 Coiled-coil domain-containing protein 186 1 S(0.245)S(0.341)S(0.045)S(0.223)GS(0.147)LNAR 98.182 0.028682999999999997 0.0 698690.0 638980.0 599320.0 527420.0 587530.0 622320.0 586730.0 568390.0 712500.0 614400.0 True False 659932.2728960152 608282.4416714663 637953.126145904 577545.8382253944 633765.2684115829 618435.8700421171 646042.3943329809 566418.3877532228 583127.960663355 608956.8939959671 1.0837093387112318 0.9988924465242933 1.0476162310269024 0.9484182606679205 1.0407391305693636 1.0155659228750151 1.0609000418628307 0.9301452916254759 0.9575849561976004 1.0 19.215980582668145 -7.265936105268065 24.993934789427712 0.9578988427343057 1.024567542710012 0.3755240812122216 0.03833064799260786 401.2414759447718 2230181.073321253 0.019355177206595818 0.009774515582762483 5.420806370958097e-08 7.265936105268065 0.06666869997570635 SS(ph)SVPHPFQVTLLR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSVPHPFQVTLLR 14 0 Q5VV41;Q5VV41-2 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 S(0.224)S(0.775)S(0.002)VPHPFQVTLLR 126.42 4.0257e-05 76456000.0 66754.0 88845.0 83706.0 129740.0 82987.0 74219.0 79207.0 82749.0 93701.0 84392.0 True False 63051.022549200105 84576.75284093623 89101.82269433544 142070.45059224678 89517.60476855998 73755.77169085981 87214.01654582593 82461.96303276176 76687.2604099888 83644.35253598244 0.7537989193242494 1.0111471997413415 1.0652461283145838 1.6985061906137702 1.0702169609125847 0.8817782606318971 1.0426766888811516 0.9858640844555281 0.9168253215541262 1.0 16.35198051582769 -6.003523158689004 24.998446410863107 0.9701093648213662 1.1519506699962814 0.10835424904333901 0.22397327954091278 346.40981373167 2457967.9846452074 0.07510593808658561 0.08343413712988776 9.919204438178388e-07 6.003523158689004 0.18184130517491515 SS(ph)TDSLPGPISR ddPTM_KYSE-520_SHP099_60min_R1 3 SSTDSLPGPISR 12 0 Q9HCD5 Q9HCD5 NCOA5 Nuclear receptor coactivator 5 1 S(0.038)S(0.961)TDSLPGPISR;S(0.017)S(0.983)TDSLPGPISR;S(0.005)S(0.994)TDSLPGPISR 270.93 7.997400000000001e-22 1689660000.0 2115210.0 1952260.0 1809710.0 1677060.0 1838560.0 1845150.0 1738440.0 1845750.0 2484270.0 1715600.0 True False 1997875.0847334045 1858470.4991979976 1926366.8022383796 1836447.2781735272 1983244.212024579 1833633.7344263582 1914178.480739397 1839347.5240512867 2033189.191350393 1700401.1187166034 1.1749434076127419 1.092960054390401 1.1328896347070898 1.080008274494436 1.1663390421205173 1.0783536391756279 1.1257217251092757 1.081713899035514 1.1957115112256367 1.0 20.697443682582545 -10.186557317292102 4.0959576617718305 0.9999450346690414 1.1218797009693506 0.46010607818486604 0.04059172084435138 25231118.61576495 1.4363128184832463 13508.464483163396 0.008951683634126014 6.507927148889309e-11 10.186557317292102 0.12193466630030925 SS(ph)TETCYSAIPK ddPTM_KYSE-520_SHP099_60min_R1 1 SSTETCYSAIPK 12 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;A0A0A0MT44 O75369-2 FLNB Filamin-B 1 S(0.182)S(0.817)T(0.001)ETCYSAIPK 198.32 4.5311e-08 314660000.0 215020.0 224470.0 178870.0 215200.0 210370.0 207050.0 186470.0 218750.0 272170.0 223770.0 True False 203092.4119682566 213686.12426366087 190400.24640211882 235652.54329776097 226924.92215843406 205757.72414870237 205320.20737182544 217991.20730663402 222750.78884736192 221787.5718904258 0.915706909260878 0.9634720396742182 0.8584802330411286 1.0625146453841208 1.0231633820787143 0.9277243192434471 0.925751635322758 0.9828828795435509 1.0043429708379332 1.0 17.758818999204227 -5.251688464252623 24.997694303568025 0.9849442393990541 0.9176449662530651 0.373580952930638 0.04524084270803547 910.5442740545169 2334291.972334275 0.01316999660329971 0.022428589307011557 5.601592807041188e-06 5.251688464252623 -0.06729927314598894 SS(ph)TPLHSPSPIR ddPTM_KYSE-520_SHP099_60min_R1 1 SSTPLHSPSPIR 12 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 S(0.046)S(0.867)T(0.087)PLHSPSPIR 126.12 9.244799999999999e-05 568470000.0 225470.0 272410.0 198550.0 317930.0 156780.0 149880.0 143860.0 188720.0 215550.0 186720.0 True False 212962.729636698 259323.01470425364 211348.85069123245 348145.97161085997 169117.69404382398 148944.54332483682 158402.77273829977 188065.37436757903 176411.5535733139 185065.8060659616 1.1507405617696513 1.4012475897996257 1.1420199937740145 1.88120095771108 0.9138246423736789 0.8048193585353615 0.8559267436029834 1.016208117346909 0.9532368908302643 1.0 17.497678832766972 -5.897218490944939 24.963557890519002 0.915325978990732 1.379016770264104 0.5719172390672704 0.19886990459109705 7.758412998230375 1869.1368124853298 0.059838866923377 0.0678509001196438 1.2670142782159108e-06 5.897218490944939 0.4636907912733721 SS(ph)TPLPTISSSAENTR ddPTM_KYSE-520_SHP099_60min_R1 2 SSTPLPTISSSAENTR 16 0 P42166;G5E972;P42167;H0YJH7;P42167-2;P42167-3 P42166;G5E972 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 S(0.001)S(0.499)T(0.499)PLPTISSSAENTR;S(0.007)S(0.993)TPLPTISSSAENTR 226.65 2.3790000000000002e-18 1551000000.0 740550.0 781530.0 621740.0 588150.0 559030.0 710650.0 640030.0 746120.0 814160.0 597060.0 True False 699470.2152501747 743984.1256995535 661818.3552191734 644047.5991662553 603022.480554401 706214.5697477674 704730.4784908533 743531.8838657165 666329.0673034068 591770.5129056511 1.1819957229969225 1.2572172987236534 1.118369943729674 1.0883401337520495 1.0190140728599362 1.1933926316811305 1.1908847486005305 1.2564530804600287 1.1259923446196496 1.0 19.17467828528996 -4.770871990118108 24.989996790182087 1.133050904576597 1.2196065148402855 0.1939642104990731 0.07616723396548074 320.2436928231838 848434.8144460205 0.02103901048138414 0.04475089273958997 1.6948372863002495e-05 4.770871990118108 0.08655561026368841 SS(ph)TPPRQS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSTPPRQSPSR 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.31)S(0.387)T(0.305)PPRQS(0.78)PS(0.218)R 78.486 0.041422 3836800000.0 206900.0 201650.0 186920.0 204010.0 198210.0 177560.0 189490.0 203380.0 236700.0 193810.0 True False 195422.84455507566 191962.43131717926 198969.16228257422 223399.04906215667 213807.9993393696 176451.78217746242 208645.49844418498 202674.52224924887 193721.2467214261 192092.99418189845 1.017334574784253 0.999320314281761 1.0357960379032072 1.1629734338495115 1.1130442328204253 0.9185747920112853 1.0861692240926417 1.0550854450075908 1.0084763764887013 1.0 17.551445377910106 -8.991921472289253 13.779450665345712 0.9999932122497881 1.0459201992260143 0.04059849712992003 0.06373473138307985 0.0 0.0 0.06424896499830776 0.015582662883802055 1.0187755830766487e-09 8.991921472289253 0.045926986976226214 SS(ph)TPRES(ph)PCGK ddPTM_KYSE-520_SHP099_60min_R1 2 SSTPRESPCGK 11 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;A0A1W2PNU4;A0A286YES2;F8VYC4;P0DJD0;P0DJD1;J3KQ37;H7BZ48;Q99666;O14715 P49792;Q99666 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2;RGPD8;RGPD6;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 2 S(0.322)S(0.582)T(0.1)PRES(0.996)PCGK;S(0.139)S(0.855)T(0.012)PRES(0.994)PCGK 107.74 0.0072845 561980000.0 1299210.0 1249630.0 1187380.0 1016070.0 1190260.0 1052990.0 1049550.0 1089260.0 1481060.0 1045880.0 True False 1227140.2313890744 1189595.899067129 1263920.4146751731 1112636.9873074156 1283926.6903469947 1046417.8988231907 1155648.7566209007 1085481.6112951944 1212136.8384843084 1036614.3168823265 1.18379633717559 1.147578110482694 1.2192774053868771 1.0733374690923925 1.2385770381876198 1.0094573090311438 1.1148300171046999 1.0471412497560701 1.1693228800175897 1.0 19.983447793639357 -6.263582715626947 24.999950374002882 1.074014104035885 1.1682162249557744 0.4128687648404654 0.06192419946623417 210.10189877934982 2450614.9431949765 0.019870658527048835 0.018355917569408384 5.450260802612399e-07 6.263582715626947 0.09420212091988933 SS(ph)TSSEPTPTVK ddPTM_KYSE-520_SHP099_60min_R1 4 SSTSSEPTPTVK 12 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 S(0.024)S(0.976)TSSEPTPTVK;S(0.209)S(0.791)TSSEPTPTVK;S(0.054)S(0.938)T(0.008)SSEPTPTVK;S(0.036)S(0.944)T(0.018)S(0.002)SEPTPTVK 313.52 2.6436999999999998e-39 2603460000.0 7790700.0 6487300.0 5604690.0 6041840.0 5992330.0 6796050.0 7394070.0 8169000.0 7351830.0 7974300.0 True False 7358534.340624588 6175640.370364173 5965977.285221074 6616054.657054562 6463892.279306216 6753633.331083257 8141534.754769086 8140663.645658924 6016922.996552525 7903653.905911516 0.9310294236341488 0.7813652323193352 0.7548378707168386 0.8370881032766506 0.8178359473042671 0.854495074237992 1.0300975791310456 1.0299873631321503 0.7612837136064604 1.0 22.914088343276482 -6.597628066901813 6.412993756830937 0.9572995205954424 0.8204814500610864 0.3582856356403694 0.083200883218118 0.2285739861501255 15.483134237040034 0.031806812397249626 0.024541108904685967 2.525642826278963e-07 6.597628066901813 -0.13681807053435602 SS(ph)VGNGNLHR ddPTM_KYSE-520_SHP099_60min_R1 1 SSVGNGNLHR 10 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 S(0.173)S(0.827)VGNGNLHR 91.31299999999999 0.0049058 0.0 183950.0 190930.0 190080.0 220100.0 192530.0 172760.0 187720.0 211500.0 261380.0 185640.0 True False 173745.92680476612 181757.43620822742 202332.86093875315 241018.23782452193 207681.01565414894 171681.74075793166 206696.5695706497 210766.3558644711 213919.98085359717 183995.37402573464 0.9442950820082304 0.9878369886778011 1.0996627605999145 1.3099146600871159 1.1287295496086847 0.9330763975289905 1.123379164639976 1.1454981245071525 1.1626378216643485 1.0 17.48930996922982 -4.73331087684048 4.001963008811473 1.1204916562258413 0.9572570062512807 0.28375797761362354 0.09401152975977951 0.26826860113311407 9.240181131173163 0.026072176966471763 0.07148344708191168 1.8479453484835208e-05 4.73331087684048 -0.1632346499745606 SS(ph)VGPSKPVSQPR ddPTM_KYSE-520_SHP099_60min_R1 4 SSVGPSKPVSQPR 13 1 Q9Y657 Q9Y657 SPIN1 Spindlin-1 1 S(0.022)S(0.978)VGPSKPVSQPR;S(0.003)S(0.997)VGPSKPVSQPR;S(0.022)S(0.844)VGPS(0.134)KPVSQPR;S(0.13)S(0.845)VGPS(0.025)KPVSQPR 204.18 7.781e-09 1206350000.0 1660190.0 1538560.0 1565440.0 1537070.0 1442610.0 1454680.0 1475720.0 1648100.0 1929520.0 1629950.0 True False 1568095.951193286 1464645.268174356 1666350.7671925595 1683152.670663052 1556135.1996719034 1445600.802533853 1624900.1792392868 1642383.1257694303 1579167.8072409227 1615509.9110819122 0.9706507774645141 0.9066148453360329 1.0314704699500103 1.0418708415944284 0.9632470769738296 0.8948263285897946 1.0058125722986657 1.0166345093293305 0.977504252006321 1.0 20.62355817082492 -4.754868110525099 24.99988752658314 0.9898746246728617 0.9386328230612488 0.20278184487511286 0.041776779948393475 270.777009602164 1030123.844196855 0.011526331598930512 0.029014943945808 1.7584575531191437e-05 4.754868110525099 -0.05124180161161285 SS(ph)VTDENWLSPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSVTDENWLSPR 12 0 H3BRS1;Q12968;I3L3K7;H3BR83;Q12968-5;Q12968-6;Q12968-4;Q12968-3;Q12968-2 H3BRS1 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 1 S(0.085)S(0.915)VTDENWLSPR 171.54 1.7532e-06 0.0 164120.0 164030.0 129000.0 119980.0 167170.0 149690.0 144030.0 156340.0 163340.0 159640.0 True False 155015.93643489134 156149.75258595028 137315.5464072979 131382.86312669757 180325.32793281067 148755.7291853138 158589.95799733986 155797.69303003018 133681.57346631915 158225.7137980407 0.9797139334302747 0.986879748163183 0.8678459594915618 0.8303508953948829 1.1396714453314327 0.940148889928129 1.0023020543915138 0.9846547017565701 0.8448789407071363 1.0 17.2716245505709 SS(ph)WPNSEK ddPTM_KYSE-520_SHP099_60min_R1 1 SSWPNSEK 8 0 A0A0A0MR36;Q9ULV0-2;Q9ULV0 A0A0A0MR36 MYO5B Unconventional myosin-Vb 1 S(0.396)S(0.604)WPNSEK 132.25 0.0011635999999999999 0.0 609760.0 625860.0 556670.0 565530.0 647280.0 612370.0 582570.0 545580.0 730390.0 563600.0 True False 575935.397273576 595792.7461649873 592553.8389034924 619277.8011672053 698217.2534805876 608547.9716828816 641461.8609352938 543687.5103193286 597769.5876335549 558606.9424741656 1.0310208368028149 1.0665688176486305 1.060770631097011 1.1086110001145315 1.249925843005216 1.089402807969981 1.1483241831799471 0.97329171726947 1.070107695020637 1.0 19.091473978256627 -7.259996157844419 24.99496218045099 1.0162747791927442 1.109198133234715 0.3305039914778519 0.06083741137420477 167.07510260342863 2893618.169255412 0.032309963934567434 0.01734406527526494 5.495457356068823e-08 7.259996157844419 0.09292335404197072 SSADKIGEVSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SSADKIGEVSSPK 13 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 SSADKIGEVS(0.319)S(0.681)PK 66.068 0.018763 666180000.0 1007000.0 1405100.0 1289700.0 726930.0 928190.0 871630.0 578980.0 643240.0 1150300.0 959060.0 True False 951139.7025952677 1337596.8869019023 1372836.1255929617 796017.2086405252 1001233.2723213226 866189.8338552674 637508.9487002705 641008.7505733441 941434.5167032382 950563.4745373904 1.0006061962965258 1.4071620914667156 1.444234038406618 0.8374161536428927 1.0533050123860392 0.9112382887179785 0.6706642594388831 0.6743460776097072 0.9903962669735497 1.0 19.858423441492413 -5.2716431100524765 24.64093639673767 0.8634021381286409 1.2963169064987448 0.5636260262763975 0.16380300253204003 394.3682657504883 952357.5223114762 0.04799372031354343 0.07213323126485482 5.350038286153443e-06 5.2716431100524765 0.4329147683701039 SSASSSPKRPS(ph)VER ddPTM_KYSE-520_SHP099_60min_R1 1 SSASSSPKRPSVER 14 2 S4R419;S4R3M9;O75764-2;O75764 S4R419 TCEA3 Transcription elongation factor A protein 3 1 S(0.001)S(0.004)AS(0.151)S(0.189)S(0.189)PKRPS(0.466)VER 60.333999999999996 0.026741 137540000.0 142010.0 147540.0 145280.0 118080.0 127600.0 104160.0 101180.0 112230.0 192170.0 102970.0 True False 134132.4222100833 140451.95693794492 154644.98125621857 129302.28769795356 137641.39405531273 103509.89880380982 111408.26182164035 111840.70032467904 157276.77221147664 102057.76590944777 1.3142794280750203 1.376200582938127 1.5152691211507565 1.266951971226559 1.3486616410694023 1.0142285389203058 1.0916196413753456 1.0958568348822306 1.5410563890946107 1.0 16.63902644037206 -6.136654578581005 6.972885744640445 1.151389618669037 1.370455219094024 0.331156893655027 0.1533690578190685 0.31477668329391373 16.553488248815214 0.05082364975977794 0.050903582955293306 7.300379239811303e-07 6.136654578581005 0.2190656004249869 SSATIQNET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 SSATIQNETPK 11 0 F5GX09;Q5HYJ3-3;Q5HYJ3-2;Q5HYJ3 F5GX09 FAM76B Protein FAM76B 1 SSATIQNET(1)PK;SSATIQNET(1)PK;SSATIQNET(1)PK;SSATIQNET(1)PK;SSATIQNET(1)PK 248.61 7.3391e-14 2776570000.0 3177480.0 3771740.0 2595210.0 2146100.0 2189880.0 3318010.0 2348900.0 2841350.0 3447750.0 3674560.0 True False 3001218.8502506553 3590539.9489028435 2762501.389082813 2350064.698751504 2362211.0972872153 3297301.068836686 2586349.7350548613 2831494.020026076 2821725.51070468 3642006.2571644173 0.8240564783069142 0.9858686930698345 0.7585108849411021 0.6452665187294903 0.6486016032071232 0.9053529390155111 0.7101442316215387 0.7774544633074334 0.7747722852353391 1.0 21.796301970269436 -4.782612687221529 24.798093120533863 0.7623974082775132 0.9049625671557927 0.16786038398230896 0.10944284682336994 276.9840294933946 324402.6011662171 0.027687133439533166 0.057729031631231734 1.6496329123708656e-05 4.782612687221529 0.14256515887827947 SSATLWNS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 5 SSATLWNSPSR 11 0 Q3KQU3-4;Q3KQU3;C9JIR3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSATLWNS(0.997)PS(0.003)R;SSAT(0.001)LWNS(0.994)PS(0.005)R;SSATLWNS(0.888)PS(0.112)R;SSATLWNS(0.994)PS(0.006)R;SSATLWNS(0.752)PS(0.248)R 212.55 1.2540999999999998e-09 4050570000.0 4181870.0 3837400.0 3462300.0 3056360.0 3413300.0 3233150.0 2903170.0 3146030.0 3935620.0 3236450.0 True False 3949893.3347488283 3653045.543945173 3685485.3978758696 3346835.535471859 3681907.2909796233 3212970.711573903 3196650.75580877 3135117.1562189246 3221010.6169065475 3207777.57092 1.2313488848343022 1.1388088678784136 1.148921742980721 1.0433502515300577 1.14780629566022 1.0016189216799136 0.9965313009193345 0.977348674247312 1.0041253003657458 1.0 21.613142677309025 -4.911420574777481 0.43136035361536545 0.976791797571518 1.30083567545116 0.8003381263373475 0.037822413190091386 1.3217475405418984 0.2889913548359475 0.031016809019490714 0.2086988536458759 1.226251143068988e-05 4.911420574777481 0.32404387787964206 SSATLWNSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 SSATLWNSPSR 11 0 Q3KQU3-4;Q3KQU3;C9JIR3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSATLWNS(0.273)PS(0.727)R;SSATLWNS(0.093)PS(0.907)R 167.22 1.5343e-05 1694450000.0 2058370.0 1909010.0 1832960.0 1505620.0 1643340.0 1546060.0 1343010.0 1572910.0 1928110.0 1650600.0 True False 1944188.1128411354 1817298.2941175709 1951115.5344396953 1648713.6721188389 1772661.5086744353 1536410.466058161 1478774.5573145002 1567453.942329954 1578013.8276977157 1635976.968147368 1.1883957724923202 1.1108336666716874 1.1926301973854805 1.0077853809799624 1.0835491838750353 0.9391394230922706 0.9039091540445776 0.9581149202271401 0.9645697087561743 1.0 20.641721006984355 -5.664824133624039 1.1197789602447354 0.9484121166015832 1.165908802150089 0.7649935881796237 0.04742290809057714 0.2273550877875231 0.5987901171507186 0.019173936060459508 0.031958870129100515 2.1635944880921773e-06 5.664824133624039 0.21749668554850576 SSATS(ph)GDIWPGLSAYDNS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 SSATSGDIWPGLSAYDNSPR 20 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 S(0.023)S(0.029)AT(0.164)S(0.784)GDIWPGLS(0.002)AY(0.003)DNS(0.995)PR;S(0.17)S(0.201)AT(0.286)S(0.343)GDIWPGLS(0.004)AY(0.011)DNS(0.986)PR 98.376 0.0010529000000000003 213198000.0 174937.0 159552.0 140718.0 143905.0 161955.0 158142.0 156428.0 160035.0 162879.0 163705.0 True False 165232.8958817361 151886.8824275655 149788.90743676064 157581.6879333842 174699.9371021017 157154.97711820368 172241.2688301596 159479.87593744966 133304.2794454549 162254.7010605626 1.0183550602953677 0.9361015824797134 0.9231714487018221 0.9711995208974922 1.0767018518427633 0.968569638296918 1.0615487114044815 0.9828983375829756 0.8215742198785243 1.0 17.307900752960197 -7.5587692832227 24.996009536901283 0.9079366259872242 0.992397689182027 0.2222600047240768 0.061217344930825236 255.73507680736515 178102.73669954776 0.04098516669315844 0.015491030875204908 2.7620447890528905e-08 7.5587692832227 0.08446106319480273 SSATSGDIWPGLSAYDNS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 15 SSATSGDIWPGLSAYDNSPR 20 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLS(0.009)AY(0.007)DNS(0.983)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLS(0.001)AY(0.01)DNS(0.989)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR;SSATSGDIWPGLSAYDNS(1)PR 348.62 7.325399999999998e-65 83376620000.0 6093930.0 5416000.0 4771260.0 5041189.0 5016830.0 5455880.0 5131950.0 5505430.0 5964290.0 5396680.0 True False 5755887.554951718 5155807.230418261 5078823.053885916 5520302.086871258 5411625.979141966 5421827.829164067 5650737.589005406 5486332.9483070215 4881325.283515576 5348869.613753504 1.0760941975761855 0.9639059469988157 0.9495133403190051 1.0320502247198082 1.0117326407110574 1.0136399315516995 1.0564358447765694 1.0256995112014058 0.9125900678087694 1.0 22.35080260570895 -4.242939293180013 23.69312021539131 0.9995554396332244 1.0760943345210463 0.2531051025900266 0.04081633740896897 3105.228145977111 3976748.5675625247 0.010499629705544064 0.32293658796899677 5.7155852503562966e-05 4.242939293180013 0.07653889488782195 SSDEENGPPSS(ph)PDLDR ddPTM_KYSE-520_SHP099_60min_R1 2 SSDEENGPPSSPDLDR 16 0 Q96B36;Q96B36-3;Q96B36-2 Q96B36 AKT1S1 Proline-rich AKT1 substrate 1 1 SSDEENGPPS(0.23)S(0.77)PDLDR;SSDEENGPPSS(1)PDLDR 359.91 5.145099999999999e-75 883580000.0 1441890.0 1411710.0 1235180.0 1113510.0 1145130.0 1252870.0 1201930.0 1342680.0 1661700.0 1363420.0 True False 1361905.4873635464 1343889.3325800884 1314801.6791578773 1219337.6556110121 1235245.2161015691 1245050.3736014713 1323432.8141063855 1338022.5564638681 1359977.168048136 1351341.1595247106 1.0078176615611645 0.9944856064716898 0.9729605805985478 0.9023166703809079 0.9140883539253889 0.9213442251987474 0.9793476686315534 0.9901441594027026 1.0063906945056442 1.0 20.36596051269258 -9.620448916058733 6.673805021018202 0.9999999756964212 0.9629815919599227 0.06892375760580005 0.0371440597510162 0.0 0.0 0.04075569221660338 0.009884707285542313 2.3963546046705306e-10 9.620448916058733 -0.03701838373649846 SSDGRPDS(ph)GGTLR ddPTM_KYSE-520_SHP099_60min_R1 2 SSDGRPDSGGTLR 13 1 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(0.059)S(0.202)DGRPDS(0.679)GGT(0.06)LR;SS(0.003)DGRPDS(0.702)GGT(0.295)LR 109.79 0.00025785 466660000.0 687780.0 640180.0 661350.0 657160.0 674470.0 654430.0 635550.0 669780.0 765760.0 698280.0 True False 649627.4723445609 609424.7918702291 703981.6791974133 719616.2888176423 727546.9517906486 650345.4596215168 699797.5963702652 667456.6895078272 626717.2872386957 692093.7824536188 0.9386408154708371 0.8805523287749953 1.0171767136841618 1.0397670186639307 1.0512259613304729 0.9396782287451053 1.0111311705320265 0.9644020888925661 0.9055380977659564 1.0 19.400608018532104 -4.7633137403423955 24.996710387864745 0.9926057994286316 0.9095965638000103 0.35215990821908416 0.04418914446366371 51.254891441421215 683582.5513459309 0.012098182682451173 0.02743337488462686 1.724591573052475e-05 4.7633137403423955 -0.08300923562862128 SSDKPIRT(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 6 SSDKPIRTPSR 11 2 Q99961-3;Q99961-2;Q99961 Q99961-3 SH3GL1 Endophilin-A2 1 SS(0.001)DKPIRT(0.973)PS(0.026)R;SSDKPIRT(0.97)PS(0.029)R;S(0.002)S(0.006)DKPIRT(0.496)PS(0.496)R;SSDKPIRT(0.804)PS(0.196)R;S(0.001)S(0.001)DKPIRT(0.993)PS(0.006)R;S(0.001)S(0.001)DKPIRT(0.997)PS(0.002)R 92.939 0.0059742 17594400000.0 7359860.0 6492050.0 6040870.0 5802020.0 5784600.0 6401280.0 6228480.0 7032880.0 7876620.0 6529590.0 True False 6951593.894282831 6180162.173234281 6430274.145933749 6353442.236359084 6239815.110128239 6361327.237085741 6858115.542506928 7008484.580766527 6446424.361431857 6471742.912544147 1.0741455568033444 0.9549455620765317 0.9935923340635149 0.9817204302173744 0.964163007469539 0.9829388038198508 1.0597014799852256 1.0829361851166888 0.9960878311369236 1.0 22.625722867734147 -6.753103345063559 24.959647639991335 1.0415927240414378 0.9885881029698692 0.2160559124868371 0.03871752416515262 221.25509021609216 662482.211475297 0.01448415010414752 0.011035745317133009 1.7656176229058863e-07 6.753103345063559 -0.05300462107156856 SSDPGPDIGVVEES(ph)PEKGDEISLR ddPTM_KYSE-520_SHP099_60min_R1 1 SSDPGPDIGVVEESPEKGDEISLR 24 1 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 1 SSDPGPDIGVVEES(1)PEKGDEISLR 210.7 4.4166000000000004e-21 463530000.0 222740.0 257080.0 175790.0 189090.0 187840.0 209640.0 175990.0 242520.0 298660.0 249560.0 True False 210384.16817881807 244729.49091505312 187121.70467394465 207061.05674801837 202621.93933659865 208331.55899799042 193780.78669688158 241678.75472459375 244430.87260591978 247349.09255474195 0.850555649935352 0.9894092935105105 0.7565085553428174 0.8371207454589418 0.8191739749025174 0.8422572197303841 0.7834303522014946 0.9770755664733507 0.9882020187796876 1.0 17.916189081153178 -7.324617015000845 7.596582094518027 0.9882407091342655 0.8416174675704209 0.5820434108408548 0.057721680804533444 0.23079717010086112 24.764764561673406 0.032500737338569265 0.015523929195525003 4.735686940568109e-08 7.324617015000845 -0.14662324156384465 SSDPGPDIGVVEES(ph)PEKGDEISLRR ddPTM_KYSE-520_SHP099_60min_R1 2 SSDPGPDIGVVEESPEKGDEISLRR 25 2 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 1 SSDPGPDIGVVEES(0.999)PEKGDEIS(0.001)LRR;SSDPGPDIGVVEES(1)PEKGDEISLRR 175.83 8.641700000000001e-11 447710000.0 440390.0 390800.0 381780.0 373390.0 395840.0 360160.0 349040.0 387800.0 511240.0 379250.0 True False 415960.6888042998 372025.3813972413 406390.1496695978 408876.8733362028 426990.3559784878 357912.1078454317 384324.3695021279 386454.8123132006 418411.70331162616 375890.1400520351 1.106601755360536 0.989718382466061 1.0811407546187313 1.0877563143305682 1.135944549967123 0.9521721101699697 1.0224380172593122 1.0281057445659603 1.1131223161472252 1.0 18.519951547081384 -6.252757951525755 24.999879138299583 1.0248786441673532 1.0756722574603164 0.23675733791957454 0.050854585189124196 1170.1972065653486 3369817.787327397 0.01736995903919827 0.017063730290618542 5.587815377096922e-07 6.252757951525755 0.05079361329296317 SSDQPLTVPVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 12 SSDQPLTVPVSPK 13 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK;SSDQPLTVPVS(1)PK 319.8 4.8327e-40 104992900000.0 56461500.0 62206800.0 47666700.0 39463600.0 41846700.0 58029100.0 45937400.0 58649300.0 66925700.0 63276200.0 True False 53329468.04179023 59218291.95368957 50739371.75141657 43214208.67883597 45139797.21484686 57666918.862098366 50581200.69781997 58445859.26714952 54773679.939603575 62715622.09613874 0.8503378625510535 0.9442351040210045 0.8090388017460244 0.6890501478657353 0.71975363882464 0.9194984747771288 0.8065167657953304 0.9319186721540613 0.8733658075756514 1.0 25.902321518935217 -7.263956789124716 24.52376637713998 0.9269816906401085 0.8191103274100423 0.3090528712478482 0.07873201108364054 254.4892157121768 2479104.06872244 0.04429682332380868 0.02286956813965396 5.445568317641991e-08 7.263956789124716 -0.10787136323006619 SSDTSSTS(ph)PLNSSASQEELHQDEGLVAAPIVSNSEKPIAK ddPTM_KYSE-520_SHP099_60min_R1 2 SSDTSSTSPLNSSASQEELHQDEGLVAAPIVSNSEKPIAK 40 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 SSDTSS(0.003)T(0.025)S(0.972)PLNSSASQEELHQDEGLVAAPIVSNSEKPIAK;SSDTS(0.002)S(0.015)T(0.111)S(0.871)PLNS(0.001)SASQEELHQDEGLVAAPIVSNSEKPIAK 256.02 7.5474e-33 1326280000.0 793280.0 951080.0 682830.0 834710.0 710760.0 813990.0 684160.0 868060.0 953530.0 849110.0 True False 749275.1770355258 905388.689199816 726846.3143666285 914040.5874352879 766692.7683287946 808909.5864757414 753321.5695581476 865048.9024667261 780392.988535199 841587.5459975835 0.8903116266381599 1.0758104650023133 0.8636609676834685 1.0860909144654955 0.911007740044428 0.9611710514523988 0.8951196736938294 1.0278774995907674 0.9272867597038321 1.0 19.68275382989822 SSDYQFPS(ph)SPFTDTLK ddPTM_KYSE-520_SHP099_60min_R1 6 SSDYQFPSSPFTDTLK 16 0 Q9UK61;Q9UK61-3 Q9UK61 FAM208A Protein FAM208A 1 SSDYQFPS(0.499)S(0.499)PFT(0.001)DTLK;SSDYQFPS(0.587)S(0.412)PFT(0.001)DTLK;SSDYQFPS(0.498)S(0.498)PFT(0.003)DTLK;SSDYQFPS(0.659)S(0.337)PFT(0.004)DTLK;SSDYQFPS(0.67)S(0.321)PFT(0.01)DTLK;SSDYQFPS(0.892)S(0.108)PFTDTLK 276.12 6.0276e-37 2807706000.0 4602450.0 4323320.0 3532440.0 3339300.0 3489930.0 4154080.0 3459690.0 3883180.0 4782950.0 3966340.0 True False 4347142.923743384 4115621.2177643846 3760146.734503836 3656666.0680028414 3764567.6360145644 4128152.845842268 3809429.228520566 3869710.15492103 3914486.848357613 3931201.3133658236 1.105805217596816 1.0469118444205707 0.9564879625267693 0.9301650504568207 0.9576125300974245 1.0500995794356351 0.9690242052903166 0.9843581761545186 0.9957482551322462 1.0 21.90653881412357 -4.540734183055106 3.578676611313157 0.9795682431409305 1.0986205152572015 0.6317626499292901 0.03075903167203061 0.14757754889969854 3.9010888665824113 0.008584738388945558 0.03258913558226044 2.8791601119441973e-05 4.540734183055106 0.11905227211627101 SSDYQFPSS(ph)PFTDTLK ddPTM_KYSE-520_SHP099_60min_R1 3 SSDYQFPSSPFTDTLK 16 0 Q9UK61;Q9UK61-3 Q9UK61 FAM208A Protein FAM208A 1 SSDYQFPS(0.177)S(0.786)PFT(0.037)DTLK;SSDYQFPS(0.226)S(0.774)PFT(0.001)DTLK;SSDYQFPS(0.397)S(0.603)PFTDTLK 313.59 4.1851999999999993e-47 2270467000.0 3888600.0 3720510.0 2922760.0 2740590.0 2984230.0 3184640.0 2700210.0 3133610.0 3834510.0 3232930.0 True False 3672891.6062680855 3541771.115000633 3111165.786181343 3001054.8496115687 3219071.923053965 3164763.4804777694 2973173.5783100547 3122740.23830007 3138259.6441308693 3204288.755381477 1.1462423915758555 1.1053220809305553 0.9709380220357051 0.9365744097099287 1.0046135566426904 0.9876648835604074 0.9278731741378571 0.9745501971554688 0.979393520281306 1.0 21.611572731797995 -4.704582672948997 3.971867163805106 0.9700096942206301 1.1364638494491897 0.8711303473234229 0.023726921832601895 0.06621135247235498 2.0799556083718036 0.006290182090231516 0.017944095889286943 1.974319009306867e-05 4.704582672948997 0.16645415522855955 SSEAS(ph)PTAQR ddPTM_KYSE-520_SHP099_60min_R1 1 SSEASPTAQR 10 0 J3KNN7;Q7Z569 J3KNN7 BRAP BRCA1-associated protein 1 SSEAS(1)PTAQR 154.29 0.00012882 0.0 166750.0 131360.0 149190.0 114850.0 140600.0 154890.0 144950.0 141740.0 154350.0 165430.0 True False 157500.04509211634 125049.26842462017 158807.02611243993 125765.3094690885 151664.4200954311 153923.27405647177 159602.9605756746 141248.33702236455 126323.9308468616 163964.41890259265 0.960574532854493 0.7626610045128691 0.9685456587186967 0.7670280559089022 0.9249837319005858 0.9387602205812342 0.9733999708222728 0.861457247662231 0.7704350229906137 1.0 17.32302325121859 SSEEDKKEEEVKK ddPTM_KYSE-520_SHP099_60min_R1 4 SSEEDKKEEEVKK 13 3 O60763;O60763-2 O60763 USO1 General vesicular transport factor p115 0 ;;; 102.73 0.00053658 4720650000.0 6219340.0 5755520.0 4083304.0 3840101.0 6065851.0 6144979.0 4220225.0 5522340.0 5641541.0 3948153.0 False True 5874340.812253078 5479016.179988357 4346520.309357399 4205063.044471536 6543198.96372894 6106625.906696774 4646846.528426881 5503184.291463844 4617179.366075375 3913175.436036554 1.5011698065351458 1.4001458072980646 1.110739955415788 1.074590984535725 1.6720944590095341 1.5605295511314587 1.187487401058978 1.4063218941795577 1.179906048564965 1.0 21.899908360121614 -7.996712881398427 3.3776361313295893 1.0004963292590532 1.357969838902781 0.2872302417779724 0.18322093802053116 0.3007346922101685 8.541932941590053 0.18824693701058715 0.04998605327925548 1.007597586593897e-08 7.996712881398427 0.3574735096437278 SSEGGVGVGPGGGDEPPTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SSEGGVGVGPGGGDEPPTSPR 21 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 SSEGGVGVGPGGGDEPPT(0.007)S(0.993)PR 177.41 4.606e-08 0.0 134000.0 147960.0 109720.0 111820.0 110920.0 150760.0 108150.0 146530.0 178040.0 149960.0 True False 126566.75287762254 140851.77950751217 116792.72675820693 122447.33918009099 119648.77295153051 149819.0509184174 119082.85744228507 146021.72163035924 145712.42402316318 148631.4710671146 0.8515474681702591 0.9476578445752616 0.785787329693246 0.8238318459809891 0.8050029518815909 1.0079900968669453 0.8011954439212484 0.9824414747561981 0.9803605049254117 1.0 17.181380097347716 -7.374913768163014 1.059864439641326 1.0088671198495656 0.855528509433621 0.39058236330191376 0.06856772651278921 0.5435218886455369 1.0850544116349383 0.0613689038970255 0.023160879071902812 4.21780242172706e-08 7.374913768163014 -0.15333861041594454 SSELVSQQDSS(ph)PVEVHINK ddPTM_KYSE-520_SHP099_60min_R1 4 SSELVSQQDSSPVEVHINK 19 0 E9PPH6;Q8NEV8-2;Q8NEV8;A0A087WZJ0;F5GXG5 E9PPH6 EXPH5 Exophilin-5 1 SSELVSQQDS(0.01)S(0.99)PVEVHINK;SSELVSQQDS(0.037)S(0.963)PVEVHINK;SSELVSQQDS(0.047)S(0.953)PVEVHINK;SSELVSQQDS(0.128)S(0.872)PVEVHINK 216.87 7.990499999999999e-19 4984100000.0 3082460.0 3159030.0 2927700.0 2972680.0 3013080.0 3016840.0 2833200.0 3024520.0 3796900.0 2882240.0 True False 2911469.7990683294 3007265.4569993005 3116424.226485621 3255202.613431167 3250192.25391992 2998010.782520024 3119607.505367377 3014028.646048272 3107478.672059923 2856705.59594879 1.0191704049577957 1.0527040172652111 1.0909154345149001 1.1394953046780534 1.1377414104306545 1.0494643853996102 1.0920297526603435 1.0550714957546161 1.0877840112284458 1.0 21.445920933162352 -9.390201700455037 11.318919469338558 1.0000001162737304 1.0820750132756554 0.3052492603640997 0.03635652395615549 0.0 0.0 0.037979369721832454 0.009211350173970616 4.071911211077766e-10 9.390201700455037 0.08207489700192494 SSEPVKETVQTTQS(ph)PTPVEK ddPTM_KYSE-520_SHP099_60min_R1 6 SSEPVKETVQTTQSPTPVEK 20 1 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 SSEPVKETVQTT(0.001)QS(0.99)PT(0.009)PVEK;SSEPVKETVQTT(0.001)QS(0.991)PT(0.008)PVEK;SSEPVKETVQT(0.001)T(0.004)QS(0.991)PT(0.004)PVEK;SSEPVKETVQTTQS(1)PTPVEK;SSEPVKETVQTTQS(1)PTPVEK;SSEPVKETVQTTQS(1)PTPVEK 313.22 1.064e-53 20846720000.0 12824540.0 14360660.0 11510720.0 9700410.0 9803000.0 13306970.0 9912180.0 11380070.0 14578320.0 12726720.0 True False 12113137.20111334 13670752.337809887 12252719.429003183 10622334.049865395 10574440.328559825 13223916.264260108 10914199.88795442 11340595.193298304 11931264.577540796 12613971.162038334 0.9602952984043399 1.083778626270522 0.9713609831198651 0.8421086360045948 0.8383117570764341 1.0483547246451141 0.8652469351444718 0.8990503504104841 0.9458769505869699 1.0 23.588519204258944 -5.00150059828926 24.69369540446177 0.9146646683022768 1.023420201401286 0.26110103218500713 0.06894730853815922 58.78330101238684 967415.3017071383 0.01777725473989349 0.0361742708692502 9.965507072736783e-06 5.00150059828926 0.10875553309900932 SSEPVQHEES(ph)IRKPSPEPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSEPVQHEESIRKPSPEPR 19 2 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 SSEPVQHEES(0.56)IRKPS(0.44)PEPR 128.98 8.6053e-06 725710000.0 412160.0 508180.0 549540.0 670760.0 436890.0 430300.0 278230.0 327650.0 591040.0 280950.0 True False 389296.66317940986 483766.2700062691 584964.2276950885 734508.8287286533 471270.7574359371 427614.3380883197 306356.20366312476 326513.4586240852 483722.0349059224 278461.0015757924 1.3980293864361826 1.737285534666139 2.100704315451049 2.637743973382687 1.6924120604646506 1.535634561638716 1.1001763332368815 1.172564404984422 1.737126679027122 1.0 18.08711576691119 -6.287162862819225 2.692238630419742 1.2786860991221527 1.970220328885949 0.4415607292539091 0.351306503631172 0.28122804061980705 4.052515920515925 0.14089973919897886 0.1283743229881424 5.162227466004848e-07 6.287162862819225 0.6915342297637963 SSEQGLDEHINVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 SSEQGLDEHINVSPK 15 0 O95171-3;O95171-2;O95171 O95171-3 SCEL Sciellin 1 SSEQGLDEHINVS(1)PK;SSEQGLDEHINVS(1)PK;SSEQGLDEHINVS(1)PK;SSEQGLDEHINVS(1)PK 183.45 4.2795000000000006e-11 1451290000.0 2576180.0 2279180.0 1974780.0 2331544.0 2007570.0 1982310.0 1886336.0 1929140.0 2745850.0 2102810.0 True False 2433274.1599124903 2169684.7716810755 2102077.478559716 2553133.2407557364 2165554.3374892212 1969937.66798944 2077025.2517452638 1922448.2636046594 2247272.8572455817 2084180.739361423 1.1674967117573627 1.0410252482929336 1.0085869420344882 1.2250056785084755 1.0390434459886289 0.9451856217580313 0.9965667624304255 0.9223999758263205 1.0782523870430396 1.0 20.991048962331163 -5.997203327970967 24.99977795752596 0.9850227715372712 1.1025003209417357 0.41416962115801037 0.06810943847760126 89.00490892176386 795608.8437081912 0.02088321205872771 0.023546114884052335 1.0064603539671567e-06 5.997203327970967 0.11747754940446442 SSFASSSASDASKPS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 2 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 SSFASSSASDAS(0.049)KPS(0.475)S(0.475)PR;SSFASSSASDASKPS(0.569)S(0.43)PR 81.96700000000001 0.002996 4632300000.0 2854630.0 2472130.0 2248790.0 2392590.0 2085140.0 2221140.0 2343310.0 2538810.0 3076010.0 2197300.0 True False 2696277.9833361753 2353365.1640572185 2393750.6015912183 2619981.0342415874 2249228.6551762936 2207277.0413699527 2580194.643301717 2530003.4606727087 2517484.1239018803 2177833.631473533 1.2380550765541538 1.0805991468066916 1.0991430047719462 1.20302166170007 1.0327825884727726 1.013519586377449 1.1847528690958569 1.161706488553442 1.1559579609387052 1.0 21.054462317586708 -4.253399398714287 24.212605879841632 1.1090430036534205 1.2380551760510348 0.25307552299773484 0.06875772228051816 992.2960119453562 2988215.633823828 0.017397873064697582 0.18355361376999207 5.579568339793053e-05 4.253399398714287 0.1290121723976143 SSFASSSASDASKPSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 11 SSFASSSASDASKPSSPR 18 1 Q96IF1 Q96IF1 AJUBA LIM domain-containing protein ajuba 1 SSFASSSASDASKPS(0.006)S(0.994)PR;SSFASSS(0.001)AS(0.018)DAS(0.012)KPS(0.038)S(0.931)PR;SSFASSS(0.001)AS(0.054)DAS(0.151)KPS(0.221)S(0.573)PR;SSFASSSASDASKPS(0.132)S(0.867)PR;SSFASSSASDASKPS(0.034)S(0.966)PR;SSFASSSASDASKPS(0.003)S(0.997)PR;SSFASSSASDASKPS(0.091)S(0.909)PR;SSFASSSASDASKPS(0.003)S(0.997)PR;SSFAS(0.019)S(0.064)S(0.004)AS(0.051)DAS(0.292)KPS(0.189)S(0.381)PR;SSFASSSASDASKPS(0.008)S(0.992)PR;SSFASSSASDASKPS(0.04)S(0.96)PR 247.3 5.744299999999999e-22 98069200000.0 27629530.0 25113040.0 21573320.0 20586000.0 20717510.0 21657270.0 22762050.0 24260430.0 30147860.0 20621830.0 True False 26096864.892797478 23906571.86295846 22963970.72573244 22542487.25059342 22347860.170492854 21522098.944573585 25063060.15020031 24176276.230756957 24673768.589704353 20439136.62974096 1.2768085739406412 1.1696468542693745 1.1235293907824655 1.1029079974832146 1.09338572246611 1.0529847387612647 1.226228906055214 1.1828423415682876 1.2071825261836933 1.0 24.284830920844307 -4.299171625925301 2.474386943665395 1.1296316816033873 1.3026740427067114 0.33094205567710966 0.06556210546333449 0.6000608642213631 4.889575919953857 0.017597223002849088 0.211857703499816 5.021441113417647e-05 4.299171625925301 0.17304236110332405 SSFDWLTGSSTDPLVDHT(ph)SPSSDSLLFAHK ddPTM_KYSE-520_SHP099_60min_R1 1 SSFDWLTGSSTDPLVDHTSPSSDSLLFAHK 30 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 1 SSFDWLTGSSTDPLVDHT(0.626)S(0.286)PS(0.044)S(0.044)DSLLFAHK 138.84 2.9548e-06 364460000.0 69208.0 149430.0 120430.0 255500.0 115690.0 130300.0 120830.0 95194.0 130000.0 115750.0 True False 65368.89427727235 142251.15850099735 128193.1104948128 279782.64318112424 124794.14481394329 129486.749367669 133044.67558715952 94863.79423244669 106395.27703331399 114724.5450521374 0.5697899629723089 1.239936566637508 1.1173991619365717 2.438733952302665 1.087771973793661 1.1286752046723987 1.159687977203975 0.8268831590426892 0.9273976809841511 1.0 16.807814560094588 -6.757768996084337 1.652666664353989 0.9213589980273644 1.3272386025121663 0.10522042611893112 0.4424178783777328 0.8514067745264441 4.746819717534047 0.256732729872618 0.1571306016861104 1.7467510135113948e-07 6.757768996084337 0.40587960448480187 SSFFSDRGS(ph)GSR ddPTM_KYSE-520_SHP099_60min_R1 3 SSFFSDRGSGSR 12 1 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;A0A2R8YDH3;A0A2R8YCU0;A0A2R8Y650;A0A087WX09;A0A2R8YF89;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4 A0A0D9SG12;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 SSFFSDRGS(0.5)GS(0.5)R;SSFFSDRGS(0.997)GS(0.003)R;SSFFS(0.003)DRGS(0.855)GS(0.141)R 177.58 6.6583e-07 2526110000.0 4006650.0 3666070.0 3590630.0 2936870.0 3043810.0 2777380.0 2749130.0 2779810.0 3749190.0 3076420.0 True False 3784393.137441242 3489946.4943167395 3822087.755011131 3215989.2417978346 3283340.5300901374 2760045.341203199 3027038.8893232453 2770167.4879225334 3068431.605388696 3049165.312218544 1.2411242913844356 1.1445579812717623 1.2534865655513494 1.0547113431045532 1.0767997776090432 0.9051806178376782 0.9927434492296517 0.9085002629480216 1.0063185466176428 1.0 21.53998293831818 -5.643327418241766 1.4612349104103233 0.9605702950257438 1.2099309312910251 0.7953291948870419 0.052681883868912524 0.16051843945164476 0.7080619752555432 0.017754953842643147 0.027424150552309814 2.2733828621881425e-06 5.643327418241766 0.24936063626528138 SSFFSDRGSGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SSFFSDRGSGSR 12 1 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;A0A2R8YDH3;A0A2R8YCU0;A0A2R8Y650;A0A087WX09;A0A2R8YF89;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4 A0A0D9SG12;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 1 SSFFS(0.008)DRGS(0.292)GS(0.7)R 122.52 0.00017690000000000002 636130000.0 1293500.0 1171600.0 1129300.0 935850.0 968270.0 813670.0 905270.0 903520.0 1203500.0 952590.0 True False 1221746.9764716786 1115314.5773925474 1202096.4849438858 1024792.9026264381 1044467.3402973182 808591.5837144388 996783.5261837945 900385.9000031522 984974.7377661039 944150.7937038054 1.2940167869571895 1.1812886085889778 1.273203912934486 1.0854123191553777 1.1062505558036777 0.8564220769676189 1.0557461083875346 0.9536462882915471 1.043238796529684 1.0 19.848657770416896 -5.58438753227992 1.6021853024441102 0.9863909009393811 1.2477104931881955 0.7357832619361604 0.06665602544347031 0.18407691762166034 0.9645140318606285 0.021808416861277637 0.03456873378373375 2.603829048554688e-06 5.58438753227992 0.2613195922488144 SSFLSS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 2 SSFLSSPER 9 0 Q4AC94 Q4AC94 C2CD3 C2 domain-containing protein 3 1 SSFLS(0.018)S(0.981)PER;SSFLS(0.175)S(0.825)PER 92.538 0.0037418 875080000.0 2442590.0 2563700.0 2883000.0 1953290.0 2115710.0 2211170.0 1996270.0 2131180.0 2659790.0 2338960.0 True False 2307094.663517556 2440536.003807849 3068842.7929630945 2138930.094321946 2282204.3402567855 2197369.2678381344 2198072.4533177093 2123787.4340011524 2176839.183849524 2318238.634083346 0.9951929148268223 1.0527544351674825 1.3237820938035332 0.9226531138230728 0.9844561757807091 0.9478615512362882 0.9481648787148474 0.9161211459323809 0.9390056536221376 1.0 21.144597650978536 SSFTPS(ph)SPENVIGDFLLQDR ddPTM_KYSE-520_SHP099_60min_R1 3 SSFTPSSPENVIGDFLLQDR 20 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 SSFT(0.001)PS(0.628)S(0.371)PENVIGDFLLQDR;SSFT(0.001)PS(0.572)S(0.427)PENVIGDFLLQDR;SSFTPS(0.5)S(0.5)PENVIGDFLLQDR 118.53 6.834e-05 197133000.0 75564.0 87197.0 62605.0 57616.0 66713.0 72492.0 65022.0 79822.0 97624.0 87043.0 True False 71372.31428690054 83007.92523463456 66640.61847154178 63091.80731711791 71962.93355495362 72039.55053845803 71595.0583135669 79545.1161125948 79897.94250077104 86271.8667384293 0.827295351140329 0.9621667917110129 0.7724490148519889 0.7313138071812934 0.8341413751152571 0.8350294628129153 0.8298772360013777 0.9220284563190273 0.9261181601995053 1.0 16.396602552695725 -7.627097791709343 1.203871297138849 0.992548008612975 0.8245574732986549 0.5103292067395688 0.05667157621942159 0.40003725592182027 1.097828606372564 0.056597704661755344 0.0189139509855557 2.359946775324567e-08 7.627097791709343 -0.16799053531432007 SSFTPSS(ph)PENVIGDFLLQDR ddPTM_KYSE-520_SHP099_60min_R1 5 SSFTPSSPENVIGDFLLQDR 20 0 F5H212;P15822 F5H212 HIVEP1 Zinc finger protein 40 1 SSFTPS(0.147)S(0.853)PENVIGDFLLQDR;SSFTPS(0.155)S(0.845)PENVIGDFLLQDR;SSFT(0.001)PS(0.036)S(0.963)PENVIGDFLLQDR;SSFTPS(0.003)S(0.997)PENVIGDFLLQDR;SSFTPS(0.025)S(0.975)PENVIGDFLLQDR 279.53 2.8469999999999996e-36 808219000.0 402129.0 416180.0 333658.0 308309.0 328977.0 365390.0 328504.0 400504.0 488629.0 435617.0 True False 379822.10274571285 396186.0881010846 355166.1285516757 337610.5946635193 354865.61827691726 363109.4654754618 361712.3902100824 399114.7451023362 399906.2909347013 431757.77228489774 0.8797110952645113 0.9176119424658764 0.8226050608703748 0.7819444520404489 0.8219090449696809 0.841002730660427 0.8377669457943295 0.9243950444486224 0.9262283544274471 1.0 18.719862623090727 -7.698659224715918 1.2869360300890362 0.9928626101100396 0.8409409370201174 0.660675840946034 0.03651377514159895 0.28232289160171686 0.9145860996820522 0.03822625253127392 0.01232023281854856 2.00143170524145e-08 7.698659224715918 -0.15192167308992222 SSFYSGGWQEGSS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 SSFYSGGWQEGSSSPR 16 0 D3DPQ1;Q96BR9-2;Q96BR9 D3DPQ1 ZBTB8A Zinc finger and BTB domain-containing protein 8A 1 SSFYSGGWQEGS(0.076)S(0.462)S(0.462)PR 100.41 0.0010968 378080000.0 557130.0 588570.0 542350.0 505070.0 503670.0 493160.0 473860.0 534380.0 650960.0 539000.0 True False 526224.8882888799 560294.2137384192 577310.7487906814 553071.7009451678 543305.9635097136 490082.0055115858 521762.39322793577 532526.3605052301 532762.0733662002 534224.8793356546 0.985025049644406 1.0487984281735132 1.0806511847756082 1.0352788167277993 1.0169986171092444 0.9173702395160565 0.9766718350459141 0.9968205920462996 0.9972618160889971 1.0 19.027087639586856 -6.015137420776222 17.11767716099926 0.9762350173043263 1.0394374633532468 0.45521648948769244 0.031080738526993452 10.157714791171525 11487.19235675341 0.010504887782003782 0.010930383757955804 9.657452465998934e-07 6.015137420776222 0.06320244604892056 SSFYSGGWQEGSSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SSFYSGGWQEGSSSPR 16 0 D3DPQ1;Q96BR9-2;Q96BR9 D3DPQ1 ZBTB8A Zinc finger and BTB domain-containing protein 8A 1 SSFYSGGWQEGS(0.016)S(0.115)S(0.869)PR 160.09 6.9937e-06 0.0 216070.0 230700.0 193660.0 206490.0 184950.0 201470.0 176980.0 227130.0 264260.0 212510.0 True False 204084.1663751335 219616.82571224007 206143.63346695562 226114.74751651764 199504.51277844902 200212.55099849825 194870.86555835034 226342.13904254037 216277.0454524889 210627.32673027815 0.9689348934123653 1.0426796423878728 0.9787126707017263 1.073529968910787 0.9471919711250354 0.9505535397830088 0.9251927021221469 1.0746095606691437 1.0268232940612003 1.0 17.684333097793353 -7.279859989425178 24.9321578870908 1.038037312488851 0.986655916148741 0.19950238618630434 0.04539991694754904 1390.6638198962905 1882242.5743456145 0.025595193683474987 0.012333899889676507 5.2497667824069845e-08 7.279859989425178 -0.05138139634010985 SSFYVNGLTLGGQK ddPTM_KYSE-520_SHP099_60min_R1 1 SSFYVNGLTLGGQK 14 0 P07737;K7EJ44;I3L3D5 P07737 PFN1 Profilin-1 0 136.99 5.2693999999999994e-05 232140000.0 668130.0 632630.0 532010.0 532720.0 581820.0 591570.0 590190.0 654750.0 639640.0 642310.0 False True 631067.4970158661 602237.5052030107 566304.2158460963 583349.548631891 627605.9238970386 587877.7921982497 649852.1648993271 652478.8250697983 523497.50001222256 636619.6331096189 0.9912787231103242 0.9459926679630254 0.8895487766846564 0.9163235286704465 0.985841295580923 0.923436478587244 1.0207856168762388 1.0249115659262877 0.8223081299820392 1.0 19.2800721242682 -5.757152505156186 24.966877013372745 0.9650491458689595 0.9332123252778238 0.045062394270215744 0.060147596987981236 355.81319439259363 2072248.2588785859 0.01796840671220437 0.022362495110860157 1.7492323271619152e-06 5.757152505156186 -0.031836820591135684 SSGCCCCGGGS(ph)QR ddPTM_KYSE-520_SHP099_60min_R1 1 SSGCCCCGGGSQR 13 0 Q9UGL9 Q9UGL9 CRCT1 Cysteine-rich C-terminal protein 1 1 S(0.006)S(0.006)GCCCCGGGS(0.988)QR 65.329 0.067652 0.0 50542.0 49230.0 47996.0 57605.0 56738.0 49452.0 49319.0 57362.0 63932.0 57830.0 True False 47738.33450702092 46864.91690426348 51089.89895631522 63079.76188042522 61202.957804940015 49143.351724712025 54304.645827055545 57163.02461039144 52323.56039456791 57317.67119105919 0.8328728909430548 0.8176347002662906 0.8913463840150676 1.100529044003882 1.0677851443218942 0.8573857015387211 0.9474328718980886 0.99730193887061 0.9128696143316043 1.0 15.806692373843115 -5.016535231238858 10.891520064933847 0.9812349242033426 0.8324560858131311 0.4879155855770505 0.06611156379468006 0.4651704093904254 305.5109265401575 0.019059604866457986 0.035012695023675766 9.626419174772357e-06 5.016535231238858 -0.14877883839021144 SSGEIVYCGQVFEKS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 6 SSGEIVYCGQVFEKSPLR 18 1 Q02543;M0R0P7;M0R3D6;M0R1A7;M0R117 Q02543 RPL18A 60S ribosomal protein L18a 1 SSGEIVYCGQVFEKS(1)PLR;SSGEIVYCGQVFEKS(1)PLR;SSGEIVYCGQVFEKS(1)PLR;SSGEIVYCGQVFEKS(1)PLR;SSGEIVYCGQVFEKS(1)PLR;SSGEIVYCGQVFEKS(1)PLR 252.84 2.1208e-24 18163500000.0 8205830.0 8183780.0 6711400.0 6248140.0 5650010.0 6441520.0 5606410.0 6309260.0 7839960.0 6197830.0 True False 7750636.2519834535 7790618.924695785 7144027.582619667 6841961.3470282145 6094633.642840579 6401316.084319484 6173160.636088785 6287374.649652355 6416420.893308463 6142922.048038779 1.261718151617757 1.2682268900324167 1.1629689464968072 1.1137958928214977 0.9921391798853094 1.0420637009976712 1.0049225088343194 1.023515291335936 1.0445225974106251 1.0 22.550493645345945 -5.189830643894888 1.3978919248354649 1.0185300318512889 1.2748416959667215 0.9462782120599479 0.02327333111704899 0.08726723752062729 0.3244059202945854 0.0073019968873555855 0.019168183148774977 6.459060554170233e-06 5.189830643894888 0.2563116641154326 SSGFGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 SSGFGSPR 8 0 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 SSGFGS(1)PR;SSGFGS(1)PR 123.5 0.00090211 1289100000.0 1568470.0 1517260.0 1306430.0 1299520.0 1322230.0 1265830.0 1182480.0 1148270.0 1471940.0 1260860.0 True False 1481463.8424325706 1444368.5521463086 1390644.568161907 1423025.9900850658 1426281.9785404098 1257929.485434202 1302016.6182926793 1144286.919378233 1204672.800587817 1249689.7613342362 1.1854652956833702 1.155781696254135 1.1127918393739415 1.1387034079288338 1.1413088453390496 1.0065934157059657 1.0418718777871525 0.9156567932160462 0.9639774909427468 1.0 20.253138555942414 -6.4438455275995885 1.278576953779417 0.9604133660971613 1.1523913915928432 0.8478272524164516 0.03422118763261597 0.15865391889811659 0.5281868394499816 0.01801810788201234 0.013858800670987088 3.5987731566161094e-07 6.4438455275995885 0.19197802549568188 SSGNS(ph)PTPVSR ddPTM_KYSE-520_SHP099_60min_R1 4 SSGNSPTPVSR 11 0 H0YBT1;O95429-2;O95429 H0YBT1 BAG4 BAG family molecular chaperone regulator 4 1 S(0.009)S(0.045)GNS(0.924)PT(0.022)PVSR;S(0.035)S(0.089)GNS(0.705)PT(0.171)PVSR;SSGNS(1)PTPVSR;SSGNS(0.997)PT(0.003)PVSR 228.73 2.2585e-10 2214620000.0 2982360.0 2781060.0 2669630.0 1702570.0 2750590.0 3202410.0 2143190.0 2358520.0 2843120.0 3112750.0 True False 2816922.545612735 2647453.703143838 2841718.6213590256 1864381.7409036634 2967045.7842837223 3182422.571316327 2359844.5607187343 2350338.8446027045 2326881.077222734 3085173.4566828534 0.9130515950443386 0.8581215093138889 0.9210887689972583 0.6043037019086205 0.9617111731130539 1.0315214415004188 0.7648985037152546 0.7618174075469211 0.7542140206679246 1.0 21.556920173143375 -10.07925404115302 4.837617608301439 1.0000055646405752 0.8416366727205514 0.14089640201404785 0.1176384751829872 7.271051209730003e-06 1.383931450112559e-06 0.1173037693954996 0.028449343277331805 8.331936642686729e-11 10.07925404115302 -0.1583688919200238 SSGNSSSSGSGSGSTSAGSS(ph)SPGAR ddPTM_KYSE-520_SHP099_60min_R1 4 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2;Q12797 E5RHJ2 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGSTS(0.001)AGS(0.022)S(0.488)S(0.488)PGAR;SSGNSSSSGSGSGSTS(0.001)AGS(0.003)S(0.751)S(0.245)PGAR;SSGNSSSSGSGSGSTSAGS(0.091)S(0.454)S(0.454)PGAR;SSGNSSSSGSGSGS(0.001)T(0.001)S(0.004)AGS(0.086)S(0.454)S(0.454)PGAR 100.08 0.0025386 399933000.0 359521.0 636767.0 317129.0 449280.0 330919.0 559269.0 508634.0 649180.0 710145.0 484267.0 True False 339577.653442655 606175.7575132472 337571.6427643407 491979.43611904234 356960.4426284493 555778.3947206982 560051.6885094699 646928.1460997503 581200.5692986373 479976.7711340253 0.7074876824566865 1.262927278920302 0.7033082912882873 1.0250067622161354 0.7437035792066992 1.157927691808041 1.166830818054495 1.3478321973192047 1.210893118692919 1.0 18.8726050615609 -6.402337487270522 6.165056895415486 1.2038187993381773 0.9072975769427891 0.3948626382803704 0.17681713584778594 0.23749860014600183 11.054172250083232 0.05933856089524782 0.052053862437277915 3.959702089262522e-07 6.402337487270522 -0.29652122239538814 SSGNSSSSGSGSGSTSAGSSS(ph)PGAR ddPTM_KYSE-520_SHP099_60min_R1 2 SSGNSSSSGSGSGSTSAGSSSPGAR 25 0 E5RHJ2;E5RG56;Q12797-7;Q12797-6;Q12797-11;Q12797-2;Q12797 E5RHJ2 ASPH Aspartyl/asparaginyl beta-hydroxylase 1 SSGNSSSSGSGSGSTSAGS(0.039)S(0.173)S(0.788)PGAR;SSGNSSSSGSGSGSTSAGS(0.03)S(0.156)S(0.814)PGAR 137.62 1.8564e-06 210487000.0 96636.0 179736.0 90434.0 102474.0 90761.0 165139.0 123814.0 160352.0 188656.0 120685.0 True False 91275.40844091006 171101.2127707638 96263.52033951589 112213.09815006836 97903.37434055058 164108.30624579816 136330.32742819298 159795.77633843807 154400.82603074514 119615.82479150927 0.7630713461199918 1.4304228814957698 0.804772449693036 0.9381124809000491 0.818481789605986 1.3719614986715964 1.139734877603504 1.335908326652954 1.2908060141696656 1.0 16.868048740544534 -6.264168208010159 24.999605539200047 1.2431797095641635 0.9687717030538603 0.3187591750286364 0.20078498649493504 304.54418179322437 2790008.1558991885 0.06729445380027832 0.06204799872133616 5.442918005822328e-07 6.264168208010159 -0.27440800651030317 SSGPYGGGGQYFAKPR ddPTM_KYSE-520_SHP099_60min_R1 2 SSGPYGGGGQYFAKPR 16 1 F8W6I7;P09651-3;P09651-2;P09651;H0YH80 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ; 184.87 5.3392e-12 1019350000.0 310870.0 299670.0 210630.0 230140.0 325640.0 288670.0 230998.0 267500.0 287790.0 229234.0 False True 293625.42139601905 285273.40338615933 224207.54681991567 252012.43640588617 351266.01536184986 286868.3034533002 254349.53216322692 266572.10493496945 235534.5905955189 227203.16510135352 1.2923474075065595 1.2555872769593732 0.9868152440565627 1.1091942152014715 1.5460436706731304 1.2626069858020268 1.1194805849195086 1.1732763705824862 1.0366694957372131 1.0 17.793623407185308 -7.619063413909846 1.3741951726860018 1.0000317643469354 1.2310818631629616 0.2672695554543266 0.13752013066323507 0.6455562727539934 2.257682584795453 0.13824372458763562 0.04472985258880951 2.404011750382305e-08 7.619063413909846 0.23105009881602623 SSGRNS(ph)PSAASTSSNDSK ddPTM_KYSE-520_SHP099_60min_R1 8 SSGRNSPSAASTSSNDSK 18 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 S(0.154)S(0.154)GRNS(0.69)PS(0.001)AASTSSNDSK;SS(0.001)GRNS(0.87)PS(0.129)AASTSSNDSK;SSGRNS(0.989)PS(0.011)AASTSSNDSK;SSGRNS(0.989)PS(0.005)AAS(0.004)TSSNDSK;S(0.031)S(0.031)GRNS(0.636)PS(0.303)AASTSSNDSK;SSGRNS(0.968)PS(0.032)AASTSSNDSK;S(0.05)S(0.05)GRNS(0.881)PS(0.019)AASTSSNDSK;S(0.216)S(0.216)GRNS(0.568)PS(0.001)AASTSSNDSK 249.33 9.498299999999999e-24 4649350000.0 2987226.0 2840430.0 2506022.0 2248167.0 2221742.0 2697841.0 2294861.0 2515575.0 3427529.0 2542892.0 True False 2821518.6188926017 2703971.4792276477 2667564.187896971 2461832.115743946 2396580.4554172335 2681002.773605693 2526847.9455650435 2506849.0574646187 2805176.134574752 2520363.955220042 1.119488561582078 1.072849607147939 1.058404355597951 0.9767764336754349 0.9508866568471452 1.0637363576212653 1.0025726404837574 0.9946377197914484 1.1130043852455604 1.0 21.265200651651426 -4.766536623023677 2.083890125881955 1.0138339811534285 1.109938294522504 0.3633685528279388 0.043992191047232294 0.37456767131080343 3.0926687073865344 0.012436196867980377 0.04631194152064 1.711840815140006e-05 4.766536623023677 0.09610431336907554 SSGS(ph)EGSS(ph)PNWLQALK ddPTM_KYSE-520_SHP099_60min_R1 3 SSGSEGSSPNWLQALK 16 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 S(0.013)S(0.02)GS(0.966)EGS(0.002)S(0.998)PNWLQALK;S(0.043)S(0.063)GS(0.894)EGS(0.078)S(0.922)PNWLQALK;S(0.025)S(0.004)GS(0.97)EGS(0.348)S(0.652)PNWLQALK 235.4 5.9118e-23 334084000.0 1381120.0 1235340.0 1094200.0 1088140.0 1122060.0 1103020.0 1038960.0 1140110.0 1464140.0 1148780.0 True False 1304506.5204055384 1175992.4121168552 1164733.8827819012 1191556.4984387802 1210359.7383519143 1096135.643035506 1143988.2160724585 1136155.2245136753 1198289.083965818 1138602.702937316 1.1457082589389884 1.032838240312519 1.0229502176458682 1.046507702260724 1.0630220139382094 0.9627024775259575 1.004729931802594 0.9978504544058022 1.0524207266279324 1.0 20.118832998994286 -1.2202465744706947 1.0985903552246798 1.016010334063828 147.07586221983647 0.6359403789827744 0.028512440051075314 1212.5029531626947 1.7286104896683416 0.009108553259008067 446053.7259870716 0.060221757472592015 1.2202465744706947 146.05985188577264 SSGS(ph)EGSSPNWLQALK ddPTM_KYSE-520_SHP099_60min_R1 1 SSGSEGSSPNWLQALK 16 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 S(0.061)S(0.061)GS(0.862)EGS(0.017)SPNWLQALK 114.58 0.00028538 75342000.0 288600.0 245990.0 231460.0 240720.0 213620.0 237240.0 229380.0 224460.0 272350.0 254640.0 True False 272590.782690163 234172.27116148252 246380.2819490941 263597.95642489265 230430.67866846337 235759.29716029007 252567.96893306833 223681.40064935808 222898.10538479275 252384.0877069219 1.0800632685159846 0.927840868610593 0.9762116311991916 1.044431758039329 0.9130158749788073 0.9341290067148085 1.0007285769392877 0.8862737848556661 0.8831702006650696 1.0 17.945261428695545 -1.0000000000000002 0.5165286967389032 0.938774339432095 4.825073208850385 0.29150431347003014 0.053304713117371456 163.26811398803875 1.6592469198164674 0.028859977517857675 693.8522841059707 0.09999999999999995 1.0000000000000002 3.88629886941829 SSGS(ph)PYGGGYGSGGGSGGYGSR ddPTM_KYSE-520_SHP099_60min_R1 40 SSGSPYGGGYGSGGGSGGYGSR 22 0 P51991;P51991-2;H7C1J8 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 1 SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.056)S(0.056)GS(0.835)PY(0.046)GGGY(0.003)GS(0.004)GGGSGGYGSR;SS(0.002)GS(0.991)PY(0.006)GGGYGSGGGSGGYGSR;S(0.004)S(0.013)GS(0.983)PYGGGYGSGGGSGGYGSR;SS(0.001)GS(0.999)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.176)S(0.176)GS(0.648)PYGGGYGSGGGSGGYGSR;S(0.001)S(0.002)GS(0.997)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;SS(0.001)GS(0.999)PYGGGYGSGGGSGGYGSR;S(0.088)S(0.088)GS(0.813)PY(0.011)GGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.034)S(0.034)GS(0.931)PYGGGYGSGGGSGGYGSR;SS(0.001)GS(0.998)PYGGGYGSGGGSGGYGSR;S(0.004)S(0.004)GS(0.992)PYGGGYGSGGGSGGYGSR;S(0.003)S(0.012)GS(0.985)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.017)S(0.017)GS(0.919)PY(0.046)GGGYGS(0.001)GGGSGGYGSR;S(0.004)S(0.015)GS(0.981)PYGGGYGSGGGSGGYGSR;S(0.008)S(0.008)GS(0.985)PYGGGYGSGGGSGGYGSR;S(0.006)S(0.006)GS(0.987)PYGGGYGSGGGSGGYGSR;SSGS(0.999)PYGGGYGSGGGSGGYGSR;S(0.003)S(0.012)GS(0.985)PYGGGYGSGGGSGGYGSR;SS(0.002)GS(0.998)PYGGGYGSGGGSGGYGSR;S(0.001)S(0.005)GS(0.994)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.001)S(0.003)GS(0.996)PYGGGYGSGGGSGGYGSR;S(0.02)S(0.02)GS(0.959)PYGGGYGSGGGSGGYGSR;SS(0.003)GS(0.997)PYGGGYGSGGGSGGYGSR;S(0.025)S(0.14)GS(0.829)PY(0.006)GGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;SS(0.001)GS(0.999)PYGGGYGSGGGSGGYGSR;SS(0.003)GS(0.997)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR;S(0.001)S(0.002)GS(0.997)PYGGGYGSGGGSGGYGSR;SSGS(0.999)PYGGGYGSGGGSGGYGSR;SSGS(1)PYGGGYGSGGGSGGYGSR 623.68 9.968099999999994e-290 77112673000.0 8096589.1 7803582.4 6778980.5 6733663.5 6649158.6 6886710.0 6872083.8 7401936.0 8642189.0 6726823.5 True False 7647455.162472782 7428686.588088009 7215964.429782292 7373628.854490254 7172409.553282695 6843727.48839463 7566781.0955786975 7376260.411640845 7072985.329455842 6667229.077179497 1.1470215098275818 1.1142089917856308 1.082303359649213 1.105951028400781 1.0757706792814907 1.0264725284180274 1.1349214205760794 1.106345728675832 1.0608583037389794 1.0 22.6686558663856 -13.999999999999998 0.12791135112157836 0.6985913187909171 1.1335872261441395 0.49520678894897563 0.03130247652459401 142.17027598543925 1.1523143636443514 11.095262349542528 0.2678258479566047 1.0000000000000041e-14 13.999999999999998 0.43499590735322247 SSGSEGSS(ph)PNWLQALK ddPTM_KYSE-520_SHP099_60min_R1 6 SSGSEGSSPNWLQALK 16 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 SSGSEGS(0.006)S(0.994)PNWLQALK;SSGSEGS(0.101)S(0.899)PNWLQALK;SSGSEGS(0.03)S(0.97)PNWLQALK;SSGSEGS(0.012)S(0.988)PNWLQALK;SSGSEGS(0.002)S(0.998)PNWLQALK;SSGSEGS(0.159)S(0.841)PNWLQALK 381.07 5.931699999999999e-86 3221590000.0 3505080.0 3362260.0 2850720.0 2277280.0 2561430.0 2944720.0 2628850.0 3077330.0 3860960.0 3029160.0 True False 3310646.225196248 3200731.98274485 3034481.9725132682 2493712.0065108035 2762999.9684568956 2926340.9101915797 2894599.813103573 3066655.46048422 3159906.99088111 3002323.9990508193 1.1026945213917299 1.0660848008931605 1.0107110270152773 0.8305939023567034 0.9202870740567688 0.9746919090400431 0.9641197332528724 1.0214272215303009 1.0524870040275833 1.0 21.51764824468426 -4.826005767573147 3.4861403675816507 0.96306747144319 1.0887600000439837 0.3938348610569484 0.0576868497885567 0.2392812958849435 5.767633602210047 0.016959550360155784 0.0426924794696899 1.4927745849113139e-05 4.826005767573147 0.1256925286007936 SSGSGSSVADERVDY(ph)VVVDQQK ddPTM_KYSE-520_SHP099_60min_R1 1 SSGSGSSVADERVDYVVVDQQK 22 1 B7Z3B9;Q13480;Q13480-2 B7Z3B9 GAB1 GRB2-associated-binding protein 1 1 SSGSGSSVADERVDY(1)VVVDQQK 103.41 0.00015547 246030000.0 149630.0 192250.0 157850.0 154760.0 208680.0 312280.0 281720.0 393440.0 560820.0 314550.0 True False 141329.72561999 183014.02142686688 168025.26356892998 169468.34386970926 225101.9287732184 310330.9446856155 310199.0069222426 392075.2484695865 458989.22512171685 311763.3317161969 0.4533237595389976 0.5870286939115323 0.5389513341546082 0.5435801026914191 0.7220282370414627 0.9954055307829295 0.9949823323180984 1.2576053967324765 1.4722360791920905 1.0 18.250091728764737 -6.418270006738141 1.0691052168512742 1.260914640553248 0.5160103865584521 0.8572167422960628 0.12250607737464636 0.17285643914772586 0.4090046262714743 0.07142220373388945 0.055662741532446575 3.817068847350591e-07 6.418270006738141 -0.744904253994796 SSGTPGCSSGTERPQS(ph)PGSSK ddPTM_KYSE-520_SHP099_60min_R1 2 SSGTPGCSSGTERPQSPGSSK 21 1 Q8IYD8-2;Q8IYD8-3;Q8IYD8 Q8IYD8-2 FANCM Fanconi anemia group M protein 1 SSGTPGCSSGTERPQS(1)PGSSK;SSGTPGCS(0.004)S(0.003)GT(0.003)ERPQS(0.989)PGSSK 185.96 2.8552e-13 593830000.0 377849.0 415149.0 308729.0 303179.0 276255.0 381758.0 342822.0 376118.0 460958.0 415845.0 True False 356888.96274669224 395204.61888864683 328630.165323865 331993.04100590997 297994.6968240631 379375.3067160601 377477.79338029673 374813.33444460074 377259.6470055568 412160.93682251486 0.8658971068390601 0.9588599587709842 0.7973345748323065 0.8054937073012165 0.7230056761841694 0.9204543003050943 0.9158504837707281 0.9093858756585737 0.9153212090257178 1.0 18.652848252183997 -6.475662879509243 24.99358345636779 0.9262403498713379 0.8328460333825283 0.411512760679673 0.06082576476427082 485.96225589878935 257242.9167901209 0.022953709883185947 0.020242681869641767 3.3445455917625496e-07 6.475662879509243 -0.09339431648880958 SSILLDVKPWDDETDMAK ddPTM_KYSE-520_SHP099_60min_R1 2 SSILLDVKPWDDETDMAK 18 1 P24534 P24534 EEF1B2 Elongation factor 1-beta 0 ; 170.5 1.831e-08 1689080000.0 1829440.0 1683750.0 1081880.0 1158480.0 1754860.0 1672590.0 1290200.0 1350630.0 1393770.0 1284530.0 False True 1727957.3163017728 1602860.122639725 1151619.715869204 1268581.5908902881 1892957.498212433 1662150.7453942404 1420626.0071385694 1345944.9797694134 1140696.5020824762 1273150.0635492187 1.3572298865419423 1.2589718749817742 0.9045435796144728 0.9964116777827471 1.4868298344464979 1.305541894064386 1.1158354759675582 1.0571770118105803 0.8959639046024978 1.0 20.279971046048765 -7.306106863962683 2.3227206043817046 0.956742245136333 1.2061552850965886 0.2988706424865918 0.1614225113867816 0.4629734044192012 4.7394806219179095 0.12456545270198223 0.05072167090834767 4.9418907019795935e-08 7.306106863962683 0.24941303996025566 SSKAS(ph)LGS(ph)LEGEAEAEASSPK ddPTM_KYSE-520_SHP099_60min_R1 3 SSKASLGSLEGEAEAEASSPK 21 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 2 S(0.341)S(0.34)KAS(0.396)LGS(0.922)LEGEAEAEASSPK;S(0.057)S(0.065)KAS(0.906)LGS(0.973)LEGEAEAEASSPK;S(0.169)S(0.2)KAS(0.636)LGS(0.995)LEGEAEAEASSPK 102.21 0.00061381 2564880000.0 2156320.0 2059040.0 1743500.0 1532830.0 1740110.0 1629390.0 1448080.0 1396260.0 2345310.0 1571350.0 True False 2036704.6310826521 1960120.6277179525 1855888.7996986343 1678509.7023378564 1877046.7571284506 1619220.3726184699 1594466.0582988816 1391416.6999495325 1919460.8244538584 1557429.0614918019 1.3077350881919274 1.258561738818735 1.191636168597592 1.077743920310615 1.2052213507114726 1.0396752010441364 1.0237808563631163 0.8934061488596775 1.2324547370493268 1.0 20.570735021520658 -4.75461653907813 0.5258637215084896 1.0242165805405354 1.4222314891943078 0.5181307849430696 0.08852576135121243 2.1047384000845253 0.6417653620199254 0.05609732878355422 0.485188182107315 1.7594764605221678e-05 4.75461653907813 0.3980149086537723 SSKS(ph)FS(ph)LDEPPLFIPDNIATIR ddPTM_KYSE-520_SHP099_60min_R1 1 SSKSFSLDEPPLFIPDNIATIR 22 1 Q92576-2;Q92576;E7EVH3;D6R9X2;E9PE34;A0A1B0GX99 Q92576-2 PHF3 PHD finger protein 3 2 S(0.446)S(0.483)KS(0.499)FS(0.572)LDEPPLFIPDNIATIR 90.633 0.0017629000000000002 30116000.0 27713.0 33436.0 31128.0 44065.0 43471.0 51995.0 58927.0 76426.0 95883.0 63317.0 True False 26175.704645504145 31829.684371540814 33134.56068656096 48252.924351374684 46891.9203838441 51670.479918434045 64883.91623209921 76160.89604396255 78473.06421373259 62756.06063988059 0.4171024181347332 0.5071969790167724 0.5279898124374048 0.7688966429596225 0.7472094313396872 0.8233544201402307 1.0339067744297894 1.2136022444271044 1.2504459874249032 1.0 15.937467173001375 -6.118323470408365 0.6789623177549207 1.1896763383981117 0.4402987679856125 0.8904478698894993 0.09189998409769402 0.23269912262951956 0.23806000058205726 0.06918612413832305 0.08339793908458934 7.61511611085126e-07 6.118323470408365 -0.7493775704124992 down SSLDVLPSQVYSLVGS(ph)SPLR ddPTM_KYSE-520_SHP099_60min_R1 2 SSLDVLPSQVYSLVGSSPLR 20 0 Q5SQL3;J3KP92;Q86Z02-2;Q86Z02;H3BLW0;Q86Z02-4;Q86Z02-3 Q5SQL3 HIPK1 Homeodomain-interacting protein kinase 1 1 SSLDVLPSQVYS(0.003)LVGS(0.499)S(0.499)PLR;SSLDVLPSQVYSLVGS(0.5)S(0.5)PLR 197.6 4.2682e-12 143150000.0 220250.0 257300.0 172263.0 147329.0 152072.0 238040.0 156215.0 186304.0 217940.0 178266.0 True False 208032.29344251007 244938.9217848261 183367.34861054528 161331.10386392107 164039.20122867977 236554.30406354548 172006.7367114801 185657.75490768065 178367.58982031114 176686.70192884922 1.177407757185278 1.3862895119490186 1.0378106932144011 0.9130913764460228 0.9284184912497686 1.3388347933440097 0.9735126347015425 1.0507737870529952 1.0095133808776329 1.0 17.430833936039683 -4.777764355325954 24.86728374660948 1.0343033926522236 1.2818485900480052 0.4066563861746849 0.12092539446053237 193.38563970426955 294578.4400268101 0.03210457541797382 0.0671497297018571 1.6681520928749083e-05 4.777764355325954 0.24754519739578162 SSLFPFEDAFLDDSHGDQALSSGLS(ph)SPTR ddPTM_KYSE-520_SHP099_60min_R1 2 SSLFPFEDAFLDDSHGDQALSSGLSSPTR 29 0 Q8NE35-2 Q8NE35-2 1 SSLFPFEDAFLDDSHGDQALSS(0.004)GLS(0.439)S(0.439)PT(0.119)R;SSLFPFEDAFLDDSHGDQALSSGLS(0.447)S(0.447)PT(0.107)R 145.07 1.0243999999999999e-06 159125000.0 86484.0 103414.0 73784.0 124340.0 66504.0 77093.0 80286.0 79744.0 115352.0 92299.0 True False 81686.56011842014 98445.83621242136 78540.23469857412 136157.23621581588 71737.48644400096 76611.83399080366 88402.09239585121 79467.38667638953 94406.98458728328 91481.30266753542 0.8929317547574538 1.0761306774368604 0.8585386566259098 1.488361361781689 0.784176485819314 0.8374589315723793 0.9663405506710504 0.8686735361125401 1.0319812009059433 1.0 16.481189289009272 SSLFPFEDAFLDDSHGDQALSSGLSS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 4 SSLFPFEDAFLDDSHGDQALSSGLSSPTR 29 0 Q8NE35-2 Q8NE35-2 1 SSLFPFEDAFLDDSHGDQALSSGLS(0.262)S(0.647)PT(0.092)R;SSLFPFEDAFLDDSHGDQALSSGLS(0.249)S(0.748)PT(0.003)R;SSLFPFEDAFLDDSHGDQALSSGLS(0.031)S(0.965)PT(0.004)R;SSLFPFEDAFLDDSHGDQALSSGLS(0.188)S(0.809)PT(0.004)R 255.56 2.9472e-32 425931000.0 222929.0 250937.0 195113.0 271026.0 194169.0 244200.0 196590.0 219398.0 310634.0 251898.0 True False 210562.68397205631 238881.60985588402 207690.29617183763 296784.2295530618 209448.99562951465 242675.85721860922 216463.23573350732 218636.95954587802 254230.69604589566 249666.37969367826 0.8433762056004528 0.9568032754308916 0.8318713013208182 1.188723247067521 0.8389154995017459 0.9720005453531794 0.8670099514363581 0.8757164653652166 1.0182816619435002 1.0 17.929642034129674 -4.98231864900973 0.008367612012967863 1.849476731840976 1.5917497754946801e-07 0.04654199310019547 0.1040726687542222 34232.54722064907 57.42561105808977 6050.834595278519 6648.789316187523 1.041552944431021e-05 4.98231864900973 -1.8494765726659983 SSLFPFEDAFLDDSHGDQALSSGLSSPT(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 SSLFPFEDAFLDDSHGDQALSSGLSSPTR 29 0 Q8NE35-2 Q8NE35-2 1 SSLFPFEDAFLDDSHGDQALS(0.01)S(0.035)GLS(0.329)S(0.216)PT(0.411)R 62.446999999999996 0.045207 15391000.0 19511.0 24829.0 21219.0 17877.0 16163.0 19664.0 18431.0 18277.0 31299.0 22017.0 True False 18428.685935785783 23636.177570911208 22586.810691600407 19576.024705083964 17434.93614510989 19541.269682009563 20294.185349225678 18213.601352883874 25615.890583582273 21821.9465089668 0.8445023879154546 1.0831379116981579 1.0350502271792903 0.8970796760518146 0.798963380189102 0.8954870123057037 0.9299896936731398 0.834646045227898 1.173859104322179 1.0 14.41349217477576 -7.761085862147865 24.999999999552088 1.0869295495467128 0.9198758971440658 0.3601307765203089 0.09155057228092305 10.852893773426043 767985.5766325478 0.07523728893197075 0.024384441077730978 1.733461250087714e-08 7.761085862147865 -0.16705365240264702 SSLFS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 10 SSLFSPR 7 0 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 SSLFS(1)PR;SSLFS(1)PR;SSLFS(1)PR;SSLFS(1)PR;SSLFS(1)PR;SSLFS(1)PR;SSLFS(1)PR;SSLFS(1)PR;SSLFS(1)PR;SSLFS(1)PR 151.97 0.0012878 22512940000.0 9507080.0 8607980.0 8605090.0 8351300.0 9110690.0 9122870.0 8645770.0 9051570.0 10745850.0 9122650.0 True False 8979703.320505891 8194439.719958601 9159787.8700308 9145005.041090097 9827649.47026487 9065930.78437319 9519768.806183869 9020172.21632231 8794674.520834124 9041830.418314306 0.9931289246829297 0.9062810670902091 1.0130457491745886 1.0114108115284721 1.086909288893417 1.0026654300007738 1.0528585878918382 0.9976046662025283 0.9726652805852711 1.0 23.108183429145274 -4.875569831055312 7.774293589000899 1.0206117022182302 0.9500977992137392 0.3594317076909691 0.03588626370882821 0.21765124289112855 13.820619990880987 0.009297456059772677 0.019531522182831645 1.3317728867409705e-05 4.875569831055312 -0.07051390300449101 SSLGQS(ph)AS(ph)ETEEDTVSVSK ddPTM_KYSE-520_SHP099_60min_R1 2 SSLGQSASETEEDTVSVSK 19 0 Q13435;E9PPJ0;H0YCG1;E9PJ04 Q13435 SF3B2 Splicing factor 3B subunit 2 2 S(0.016)S(0.018)LGQS(0.965)AS(0.982)ET(0.019)EEDTVSVSK;SSLGQS(0.998)AS(0.956)ET(0.045)EEDTVSVSK 90.193 0.00027549 63998000.0 367920.0 374090.0 333544.0 345246.0 351279.0 337509.0 353885.0 391015.0 410285.0 347287.0 True False 347510.74416966323 356118.1548794618 355044.7799292688 378058.0760380048 378922.65879589494 335402.4811383932 389659.14938477124 389658.66022858664 335787.5864431791 344210.30736519746 1.0095884310662553 1.034594686037773 1.0314763164618899 1.0983345586943618 1.1008463450627255 0.9744114977432695 1.1320380042290652 1.1320365831322121 0.975530305915325 1.0 18.392930773912564 -5.079868055829396 8.731989151779974 1.0657993005677076 1.0247762256499617 0.06182761294064176 0.05676178134383627 0.893598310542175 91.24578041484753 0.015232474471178032 0.026503886735069097 8.320165098740582e-06 5.079868055829396 -0.041023074917745816 SSLGQS(ph)AS(ph)ETEEDTVSVSKK ddPTM_KYSE-520_SHP099_60min_R1 5 SSLGQSASETEEDTVSVSKK 20 1 Q13435;E9PPJ0;H0YCG1;E9PJ04 Q13435 SF3B2 Splicing factor 3B subunit 2 2 S(0.114)S(0.123)LGQS(0.766)AS(0.848)ET(0.148)EEDTVSVSKK;S(0.001)S(0.004)LGQS(0.984)AS(0.502)ET(0.502)EEDT(0.003)VS(0.003)VS(0.001)KK;SSLGQS(1)AS(0.967)ET(0.033)EEDTVSVSKK;S(0.053)S(0.055)LGQS(0.889)AS(0.818)ET(0.181)EEDT(0.002)VS(0.001)VS(0.001)KK;S(0.002)S(0.003)LGQS(0.995)AS(0.963)ET(0.037)EEDTVSVSKK 139.67 1.6613999999999999e-06 5814520000.0 4071320.0 4355330.0 4280810.0 3435950.0 3897200.0 3504620.0 3322300.0 3408390.0 5216990.0 3917000.0 True False 3845475.763624797 4146093.409316387 4556757.862138174 3762501.6549439672 4203887.467965244 3482746.3666072176 3658150.506523382 3396567.0906142043 4269716.125615611 3882298.427379883 0.9905152413077278 1.0679481464062865 1.1737268392356626 0.969142822305712 1.0828347038747348 0.8970836301622701 0.9422641187818794 0.8748856261692657 1.0997908083272185 1.0 21.888479589785096 -6.250109585241243 24.728221944219595 0.9537013924134377 1.0590733964542027 0.266553891732476 0.07720783174413821 797.7185707813869 1741088.361927237 0.025099987369290415 0.02488656227537112 5.621994478739368e-07 6.250109585241243 0.10537200404076508 SSLGQS(ph)ASET(ph)EEDTVSVSK ddPTM_KYSE-520_SHP099_60min_R1 1 SSLGQSASETEEDTVSVSK 19 0 Q13435;E9PPJ0;H0YCG1;E9PJ04 Q13435 SF3B2 Splicing factor 3B subunit 2 2 SSLGQS(1)AS(0.406)ET(0.594)EEDTVSVSK 267.93 6.832699999999999e-35 192150000.0 596920.0 490760.0 467090.0 465140.0 498450.0 475510.0 522900.0 481840.0 560280.0 524820.0 True False 563807.6576694805 467183.1529542225 497199.3687704236 509346.7657505595 537675.179207451 472542.1657085216 575759.8350122127 480168.6095023012 458547.275509424 520170.5031037812 1.083890098160743 0.8981346504013762 0.9558392215700579 0.9791919432404605 1.0336518045510499 0.9084370660945434 1.1068675205086373 0.9230984968144204 0.8815326374204988 1.0 18.988625066273578 SSLGQSAS(ph)ETEEDTVSVSK ddPTM_KYSE-520_SHP099_60min_R1 2 SSLGQSASETEEDTVSVSK 19 0 Q13435;E9PPJ0;H0YCG1;E9PJ04 Q13435 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.023)AS(0.977)ETEEDTVSVSK;SSLGQS(0.003)AS(0.997)ETEEDTVSVSK 409.56 3.2093999999999996e-107 629810000.0 754490.0 825890.0 603990.0 470610.0 519990.0 766650.0 628770.0 745190.0 899840.0 838980.0 True False 712636.9356614741 786213.0047138358 642924.1618181688 515336.63290594384 560910.2546616157 761865.0529756215 692332.2078038433 742605.1098186543 736451.7391204399 831547.2899165638 0.8570010921844012 0.9454820119643745 0.7731660840151122 0.6197322018302194 0.6745380106017742 0.9162017148201709 0.8325830848096576 0.893040141942097 0.8856402372429526 1.0 19.665438786040884 -7.626745052804313 0.8323422077497936 0.9867496873255526 0.7883306450583452 0.3203071706602202 0.0933233864834169 0.7984670048146946 1.1359352243440057 0.09984944882057738 0.039002385602375615 2.361864329491976e-08 7.626745052804313 -0.1984190422672074 SSLGQSAS(ph)ETEEDTVSVSKK ddPTM_KYSE-520_SHP099_60min_R1 7 SSLGQSASETEEDTVSVSKK 20 1 Q13435;E9PPJ0;H0YCG1;E9PJ04 Q13435 SF3B2 Splicing factor 3B subunit 2 1 S(0.005)S(0.005)LGQS(0.223)AS(0.753)ET(0.013)EEDTVSVSKK;SSLGQS(0.001)AS(0.819)ET(0.181)EEDTVSVSKK;SSLGQSAS(0.973)ET(0.027)EEDTVSVSKK;SSLGQSAS(0.833)ET(0.166)EEDTVSVSKK;SSLGQSAS(0.9)ET(0.1)EEDTVSVSKK;SSLGQS(0.064)AS(0.928)ET(0.008)EEDTVSVSKK;SS(0.001)LGQS(0.149)AS(0.793)ET(0.057)EEDTVSVSKK 283.43 6.7199e-44 9675220000.0 5151200.0 5482040.0 4627130.0 3261480.0 3902860.0 4402570.0 3424370.0 4370850.0 6595180.0 4570620.0 True False 4865452.667337382 5218674.569690203 4925402.203469764 3571450.0786002846 4209992.877764253 4375091.927579577 3770538.7382305833 4355688.541514061 5397661.56295825 4530127.862688557 1.0740210463838464 1.151992775451818 1.0872545660436654 0.7883773233015738 0.9293320200603986 0.9657766977427059 0.8323250143303527 0.9614935104566852 1.1915031377844654 1.0 22.11112034018363 -5.029520519651046 24.223549339121938 0.9450377501330538 1.1146611347383502 0.31540139332977035 0.10247220135265604 501.4930080860944 411508.61843755504 0.028253498992397697 0.04905726493948933 9.342852238795226e-06 5.029520519651046 0.16962338460529636 SSLGQSASET(ph)EEDTVSVSKK ddPTM_KYSE-520_SHP099_60min_R1 1 SSLGQSASETEEDTVSVSKK 20 1 Q13435;E9PPJ0;H0YCG1;E9PJ04 Q13435 SF3B2 Splicing factor 3B subunit 2 1 SSLGQS(0.013)AS(0.318)ET(0.669)EEDTVSVSKK 116.51 9.2901e-05 216060000.0 888410.0 870090.0 747610.0 499180.0 623000.0 712880.0 548770.0 698920.0 1025100.0 696290.0 True False 839128.1262985714 828289.570368283 795802.1368182937 546621.9171160603 672026.5556148889 708430.6514905898 604245.0270790827 696495.6096491548 838967.6806680781 690121.4123054221 1.2159137672534703 1.2002084786810132 1.1531335249544485 0.7920663051013199 0.9737801836490112 1.0265304609575927 0.8755633665394318 1.0092363419393684 1.2156812782629358 1.0 19.396490670417613 -5.024872367055488 22.624908030209774 0.9811108555603639 1.2002137273293256 0.4608422741064504 0.10267054643533241 188.4632329574938 171434.86958212184 0.028383692007372497 0.049559920961665775 9.443383630646436e-06 5.024872367055488 0.2191028717689617 SSLPPNS(ph)PKPVR ddPTM_KYSE-520_SHP099_60min_R1 2 SSLPPNSPKPVR 12 1 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.028)S(0.175)LPPNS(0.798)PKPVR;S(0.002)S(0.007)LPPNS(0.991)PKPVR 82.069 0.0093663 781540000.0 852860.0 792530.0 765210.0 675280.0 706200.0 733270.0 583290.0 670940.0 948310.0 646050.0 True False 805550.1556657411 754455.6691882177 814536.6609792891 739458.4081696643 761773.9222716448 728693.3899373042 642254.6455618163 668612.6657385731 776120.8089497084 640326.4996192944 1.2580303269420838 1.1782358993994138 1.2720645818400007 1.1548146275522078 1.189664839303944 1.1380028631808121 1.003011191858635 1.0441745986400628 1.2120704194050227 1.0 19.288448190910003 -6.3651851204319785 2.327803494740165 1.0686956658509477 1.2128520599088055 0.5287107459288967 0.06440579470095369 0.2540146107898228 2.6987805450373523 0.02563649868546858 0.02209556102078789 4.313351786241947e-07 6.3651851204319785 0.14415639405785785 SSLS(ph)GDEEDELFK ddPTM_KYSE-520_SHP099_60min_R1 2 SSLSGDEEDELFK 13 0 Q5T1M5;Q5T1M5-2 Q5T1M5 FKBP15 FK506-binding protein 15 1 SS(0.001)LS(0.999)GDEEDELFK;S(0.001)S(0.017)LS(0.982)GDEEDELFK 201.06 9.3384e-09 1028810000.0 1066250.0 991500.0 898500.0 820490.0 908590.0 933800.0 922210.0 979970.0 1327320.0 878150.0 True False 1007102.9869833227 943866.851728159 956418.7476508296 898469.1229106855 980090.863830068 927971.8078244777 1015435.9867022621 976570.7127967179 1086312.1470142957 870370.2741903629 1.15709717673912 1.084442885651356 1.0988642144752827 1.0322837872036252 1.126061967984568 1.0661804927652165 1.1666712625805638 1.1220175386908118 1.2481034557674968 1.0 19.731269759413767 -6.764181669641954 24.999496836183585 1.1443661931679474 1.0925656556611265 0.07475756537036937 0.06505540193604795 151.92120102304594 1384924.6252249763 0.024773520660777978 0.017532051801841773 1.721148451098514e-07 6.764181669641954 -0.0518005375068209 SSLS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 SSLSPGR 7 0 Q9BUQ8;F8W1J5;F8VVA2 Q9BUQ8 DDX23 Probable ATP-dependent RNA helicase DDX23 1 SSLS(1)PGR;SSLS(1)PGR 125.53 0.002273 1763480000.0 1961140.0 1770180.0 1624340.0 1627320.0 1806890.0 1876990.0 1494440.0 1542890.0 2025760.0 1859140.0 True False 1852351.6547643337 1685137.8957056508 1729047.5554358906 1781980.003528403 1949081.9632022255 1865275.0091759125 1645512.5795288805 1537538.0747032347 1657933.0492538938 1842669.4659890328 1.0052544359984301 0.9145090461469015 0.9383384200746189 0.9670643793795891 1.0577490967193495 1.0122678231794253 0.8930047465922868 0.8344079625143068 0.8997452228167336 1.0 20.813365876025333 -9.897114658856099 4.6202423651575195 1.0000003852454762 0.9465989669387925 0.0606066435452447 0.06267254750957187 46748838.0596615 3.558187800847477 213.0934005827957 0.017070957159473273 1.2673172350165902e-10 9.897114658856099 -0.05340141830668366 SSLSNNS(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 4 SSLSNNSLK 9 0 Q9ULJ7-2;Q9ULJ7 Q9ULJ7-2 ANKRD50 Ankyrin repeat domain-containing protein 50 1 SSLSNNS(1)LK;SSLS(0.001)NNS(0.999)LK;SSLSNNS(1)LK;SSLS(0.004)NNS(0.996)LK 162.38 0.00013138 3178490000.0 3605330.0 2808310.0 2803220.0 2623700.0 2622210.0 2887780.0 2700370.0 2853970.0 3197280.0 2793740.0 True False 3405335.1578528304 2673394.5722407512 2983920.046510584 2873055.6591558284 2828563.008666003 2869756.2938523972 2973349.752671508 2844070.2441916084 2616734.5488697984 2768989.6370968297 1.229811448995953 0.9654765537669885 1.0776205177998066 1.0375826693840962 1.021514479783909 1.0363911281593734 1.073803134846305 1.0271148024856813 0.9450142080030807 1.0 21.400928223774056 -4.250834568785017 24.998935262389118 1.025861850756805 1.2298115636079685 0.7087379939181953 0.040121819227132774 854.2015502911886 2013589.1503086705 0.009805322762516968 0.13793455233015692 5.612617308277592e-05 4.250834568785017 0.2039497128511636 SSPFKVS(ph)PLTFGR ddPTM_KYSE-520_SHP099_60min_R1 3 SSPFKVSPLTFGR 13 1 O95810 O95810 SDPR Serum deprivation-response protein 1 SSPFKVS(0.999)PLT(0.001)FGR;SSPFKVS(1)PLTFGR;SS(0.001)PFKVS(0.998)PLT(0.001)FGR 148.89 4.5676999999999995e-06 4327810000.0 3062730.0 3158880.0 3028560.0 2718530.0 2882230.0 3296490.0 2927350.0 3053310.0 3707060.0 2889170.0 True False 2892834.2614991097 3007122.6632244564 3223785.823467331 2976898.2738441513 3109045.1033545784 3275915.383139123 3223275.1061828285 3042718.78025791 3033951.3513778197 2863574.201540249 1.0102180205224374 1.0501291224117735 1.125790916028414 1.039574344622517 1.0857218582575219 1.1439952844166168 1.1256125664385106 1.0625597823242379 1.0594980740313726 1.0 21.44938555669051 -3.172905664646984 10.950031351144622 1.076185663246987 1.0166402951860845 0.0 0.0471510774019571 0.0 0.0 0.01094635450825317 0.0 0.0006715747133044545 3.172905664646984 -0.059545368060902604 SSPNVANQPPS(ph)PGGK ddPTM_KYSE-520_SHP099_60min_R1 7 SSPNVANQPPSPGGK 15 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK;SSPNVANQPPS(1)PGGK;S(0.001)S(0.001)PNVANQPPS(0.998)PGGK;SSPNVANQPPS(1)PGGK 272.43 2.4829e-25 8732470000.0 11110410.0 13146330.0 8552600.0 8034950.0 8525540.0 13892320.0 9724140.0 13809980.0 15514240.0 13693790.0 True False 10494093.409246774 12514760.573756386 9103914.280643828 8798589.232204195 9196451.494312944 13805612.877785552 10707150.969660854 13762076.402653553 12697245.098164 13572473.674207414 0.7731894466068724 0.9220692464881282 0.6707630826313219 0.648267179838019 0.6775810891267016 1.0171773553719383 0.7888872158955295 1.0139696515902221 0.9355144392207101 1.0 23.69418034976396 -6.259183509520549 24.996560063457913 0.9418439299518028 0.7398171999097972 0.5586211765209521 0.09436521301478777 174.49351294359548 1933513.0376802497 0.033657675837016995 0.032108136071568594 5.505750038239014e-07 6.259183509520549 -0.20202673004200555 SSPS(ph)PALEQPFR ddPTM_KYSE-520_SHP099_60min_R1 3 SSPSPALEQPFR 12 0 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 S(0.001)S(0.001)PS(0.998)PALEQPFR;SSPS(1)PALEQPFR;SS(0.001)PS(0.999)PALEQPFR 202.24 2.6475e-08 717690000.0 962560.0 1094850.0 855900.0 723410.0 823580.0 897910.0 743250.0 906150.0 1100330.0 889830.0 True False 909164.8779842127 1042251.7625966462 911072.6834884201 792162.6688988531 888391.0604708041 892305.8106271974 818384.963420974 903006.7771470002 900537.8090620502 881946.7984772639 1.030861362107037 1.181762623772952 1.033024537377361 0.8981977940920828 1.0073068602376771 1.0117456202208783 0.9279300801748661 1.023878967196318 1.0210795147925984 1.0 19.750332105403317 -4.992964828163214 24.493019303594636 0.9835577051625098 1.1065824550074306 0.4714235012250456 0.0514092492816356 105.50670735522567 367312.2134683302 0.012880305972482827 0.026710603071398643 1.0163309982695561e-05 4.992964828163214 0.12302474984492073 SSPS(ph)PEVVKPK ddPTM_KYSE-520_SHP099_60min_R1 2 SSPSPEVVKPK 11 1 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 SSPS(0.999)PEVVKPK;SS(0.004)PS(0.996)PEVVKPK 164.2 1.1808e-05 4809300000.0 12149100.0 10635300.0 10214400.0 9102300.0 9754000.0 11261500.0 9413400.0 11186200.0 12352700.0 11242700.0 True False 11475165.204369593 10124364.224089254 10872836.567617858 9967379.855293715 10521584.307331676 11191212.801258685 10364998.337930707 11147397.683078717 10109761.066226298 11143098.424688244 1.0298002195642133 0.9085771154688969 0.9757462559541246 0.8944890797348025 0.9442242997710973 1.0043178633748617 0.9301720170546456 1.0003858225267892 0.9072666040378391 1.0 23.4096471051843 SSPS(ph)PQKR ddPTM_KYSE-520_SHP099_60min_R1 2 SSPSPQKR 8 1 A0A2R8Y611;O14617-2;O14617-5;O14617-3;O14617;O14617-4 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 SSPS(1)PQKR;S(0.002)S(0.006)PS(0.992)PQKR 121.9 0.0011281 0.0 695780.0 648510.0 482170.0 543490.0 573990.0 769990.0 731120.0 372280.0 724870.0 985770.0 True False 657183.6963969565 617354.6061666454 513251.44969927677 595143.1261937729 619159.7474436437 765184.2067967124 805028.744643583 370988.6475708053 593251.8804856789 977036.8447174546 0.6726293895160165 0.6318642019535873 0.5253143240956301 0.6091306887877703 0.6337117692042576 0.7831682202506834 0.8239492184927643 0.37970793995807806 0.6071949934060461 1.0 19.89805344265798 -6.014323186051523 22.401492842921947 0.6890332359227873 0.607302235789227 0.08886537133814532 0.1541881872503672 576.4995935145038 901650.4690730274 0.05099628957689627 0.05305002880076903 9.675575673741457e-07 6.014323186051523 -0.08173100013356027 SSQKS(ph)PELGK ddPTM_KYSE-520_SHP099_60min_R1 5 SSQKSPELGK 10 1 Q9UEG4 Q9UEG4 ZNF629 Zinc finger protein 629 1 S(0.059)S(0.032)QKS(0.909)PELGK;S(0.002)S(0.007)QKS(0.991)PELGK;S(0.001)S(0.001)QKS(0.998)PELGK;SS(0.003)QKS(0.996)PELGK;SSQKS(1)PELGK 157.5 0.00013821 10490530000.0 15512460.0 14215420.0 13732340.0 13217300.0 12984650.0 13273970.0 13623370.0 13221340.0 17333110.0 13159530.0 True False 14651952.92047766 13532489.88541958 14617548.608920876 14473468.218073849 14006468.08244763 13191122.229500853 15000553.19087845 13175478.257423943 14185854.156145433 13042946.802159429 1.1233621621497252 1.037533165678411 1.1207243907872684 1.10967777739288 1.0738729747888474 1.0113605789848725 1.1500892718810227 1.0101611589217379 1.0876264674940468 1.0 23.63676651971396 -13.999999918254804 0.13009716320647322 0.7255374870107127 1.1130619259164676 0.25937949518288117 0.04442576620808959 201.41761260718096 1.6503197985294307 14.286794734674382 0.32462217519761866 1.0000001882252863e-14 13.999999918254804 0.38752443890575483 SSQPS(ph)PTAVPASDS(ph)PPTKQEVK ddPTM_KYSE-520_SHP099_60min_R1 1 SSQPSPTAVPASDSPPTKQEVK 22 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 2 SSQPS(0.997)PT(0.003)AVPASDS(0.999)PPTKQEVK 162.58 1.2689e-09 603330000.0 1459800.0 1315100.0 1353700.0 1312100.0 1414400.0 1178400.0 1119500.0 1155600.0 1527200.0 1213600.0 True False 1378821.9839608453 1251920.6219946546 1440961.6679965807 1436801.589502749 1525705.233164848 1171045.1684947158 1232669.985267112 1151591.4933190674 1249898.9775790554 1202848.448166513 1.1462973461557577 1.04079663893065 1.1979577894397426 1.1944992668800862 1.2684101937284467 0.9735600276823947 1.0247924309550849 0.9573870216771067 1.0391159247736164 1.0 20.198023452194022 -6.279178199591744 24.95283874486571 0.9979215924985707 1.1653965246661275 0.6873050494675572 0.05750549038794144 513.4079727252047 722198.4149807701 0.02157575997738328 0.019066071192393584 5.258014754060664e-07 6.279178199591744 0.16747493216755682 SSQPSPTAVPASDS(ph)PPTKQEVK ddPTM_KYSE-520_SHP099_60min_R1 4 SSQPSPTAVPASDSPPTKQEVK 22 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;C9JIR3;E9PLH3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 SSQPSPT(0.001)AVPAS(0.127)DS(0.859)PPT(0.013)KQEVK;SSQPSPTAVPAS(0.262)DS(0.737)PPT(0.001)KQEVK;SSQPSPTAVPAS(0.001)DS(0.999)PPTKQEVK;SSQPSPT(0.001)AVPAS(0.025)DS(0.972)PPT(0.003)KQEVK 206.88 3.9244e-15 591880000.0 1417460.0 1578300.0 1143397.0 956088.0 981700.0 1271340.0 940542.0 1323050.0 1701640.0 1349340.0 True False 1338830.6681635429 1502476.0989234026 1217102.200119884 1046954.3160616611 1058954.2048910707 1263405.0954803713 1035621.1641653421 1318460.6483521906 1392665.070853605 1337385.8973706362 1.0010802946223278 1.1234424573171748 0.9100605909728556 0.7828363661677775 0.7918090111261264 0.9446825317690917 0.7743622586430904 0.9858490738868613 1.0413337493625812 1.0 20.350984378729823 -4.834147808354001 7.0583751549146605 0.8910030203319322 1.0614556645474604 0.30410346700982194 0.09444182721827508 0.22798892145834565 18.078583647357984 0.02558766690766106 0.05425110366674384 1.4650491393493191e-05 4.834147808354001 0.1704526442155282 SSQQPST(ph)PQQAPPGQPQQGTFVAHK ddPTM_KYSE-520_SHP099_60min_R1 5 SSQQPSTPQQAPPGQPQQGTFVAHK 25 0 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 SSQQPS(0.013)T(0.987)PQQAPPGQPQQGTFVAHK;S(0.001)S(0.001)QQPS(0.2)T(0.798)PQQAPPGQPQQGTFVAHK;SSQQPS(0.004)T(0.996)PQQAPPGQPQQGTFVAHK;SSQQPS(0.05)T(0.95)PQQAPPGQPQQGTFVAHK;SSQQPS(0.075)T(0.924)PQQAPPGQPQQGTFVAHK 203.83 1.04e-15 9910190000.0 5862110.0 7430170.0 5074310.0 4652940.0 4437710.0 6559780.0 4824920.0 5863290.0 6663020.0 6482500.0 True False 5536927.072473437 7073213.480287453 5401408.141783058 5095154.018642578 4786932.529884028 6518837.979793166 5312670.000281363 5842951.615492177 5453183.529065475 6425070.093308685 0.8617691312410436 1.100877247651161 0.8406769207713845 0.793011429392633 0.7450397365889165 1.0145940643639255 0.8268656875532271 0.9093988906949437 0.8487352588954056 1.0 22.615280762575008 -4.801463147364117 24.999010428631298 0.8651383704868472 0.9813240398879037 0.16671278308037152 0.09645116281940813 210.14846505319815 131258.9728131255 0.024371953763376825 0.050735330404997815 1.579562637940314e-05 4.801463147364117 0.11618566940105657 SSRFS(ph)GGFGAR ddPTM_KYSE-520_SHP099_60min_R1 1 SSRFSGGFGAR 11 1 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;A0A2R8Y7T2;A0A087WVZ1 A0A0D9SG12 DDX3X ATP-dependent RNA helicase DDX3X 1 SSRFS(1)GGFGAR 154.19 2.6494e-05 1040400000.0 125020.0 141390.0 161680.0 117590.0 120380.0 114620.0 115010.0 145420.0 187630.0 128540.0 True False 118084.89137880868 134597.41216928326 172102.15149714646 128765.71824527746 129853.22113149353 113904.61406386991 126636.33318943324 144915.5719612831 153561.12176738988 127401.23560260684 0.9268739884685425 1.056484354587603 1.3508672084937374 1.0107101209514697 1.019246167568853 0.8940620828762138 0.9939961146408383 1.137473834345747 1.2053346346371523 1.0 16.959019744096246 -11.576084963171818 2.0466477443349973 0.0004997065101748636 1.066117209664496 0.02327359637874815 0.12849457784829119 3676879.5317449365 510290.9994427693 17774010.94852491 0.0362600811258034 2.6540862791911795e-12 11.576084963171818 1.0656175031543211 SSRGQEEIS(ph)GALPVASPASSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSRGQEEISGALPVASPASSR 21 1 H0Y9D5;H0Y8S9;Q9UBK8;Q9UBK8-1 H0Y9D5 MTRR Methionine synthase reductase 1 S(0.006)S(0.006)RGQEEIS(0.988)GALPVASPASSR 84.75299999999999 0.004601399999999999 934330000.0 405940.0 413790.0 427500.0 316030.0 381440.0 367010.0 358130.0 403420.0 552170.0 441730.0 True False 383421.6989786723 393910.90728854755 455057.3340241846 346065.3961821156 411457.15790328005 364719.3544545528 394333.27541197964 402020.63017893623 451909.8470729619 437816.61586073914 0.8757586740395235 0.8997166690764493 1.0393788575829872 0.7904345875538725 0.9397933815151421 0.8330413722136185 0.900681383772354 0.9182397734918565 1.0321898043648154 1.0 18.739967182644573 -7.687216405445653 4.8128004584636885 1.0161119466153004 0.8985417277852582 0.36186457316156917 0.06220560895348361 0.21188603239768794 8.752323854522988 0.04585385176928808 0.015552227533723964 2.0548664174346515e-08 7.687216405445653 -0.11757021883004215 SSRPAS(ph)PCNK ddPTM_KYSE-520_SHP099_60min_R1 5 SSRPASPCNK 10 1 K7ER53;O95644-8;O95644-11;O95644-3;O95644-10;O95644-2;O95644-5;O95644-4;O95644-6;O95644 K7ER53 NFATC1 Nuclear factor of activated T-cells, cytoplasmic 1 1 S(0.001)S(0.001)RPAS(0.998)PCNK;S(0.002)S(0.006)RPAS(0.992)PCNK;SS(0.001)RPAS(0.999)PCNK;SSRPAS(1)PCNK;S(0.012)S(0.014)RPAS(0.974)PCNK 95.428 0.0018636 1126500000.0 1985500.0 1719270.0 1596190.0 1820320.0 1778680.0 1875140.0 1679860.0 1806010.0 2038690.0 1676250.0 True False 1875360.357003878 1636673.688523117 1699082.9613943011 1993322.6655008374 1918651.9966951732 1863436.555712134 1849676.6426536948 1799745.3728359034 1668515.2871926683 1661399.7291027678 1.1287833530685953 0.9851173440403749 1.0226816169711812 1.1997851152758543 1.1548406822789923 1.121606391929819 1.1133242712472364 1.0832705346640743 1.00428286941743 1.0 20.66396779362619 -7.721142770283707 3.6192932273204317 0.9981247899001013 1.1022036588528716 0.32324389515559515 0.05792787389763053 0.30398998820190926 7.749408304301582 0.055462972428121655 0.016675020886838875 1.90045342078145e-08 7.721142770283707 0.1040788689527703 SSRPAS(ph)PCNKR ddPTM_KYSE-520_SHP099_60min_R1 1 SSRPASPCNKR 11 2 K7ER53;O95644-8;O95644-11;O95644-3;O95644-10;O95644-2;O95644-5;O95644-4;O95644-6;O95644 K7ER53 NFATC1 Nuclear factor of activated T-cells, cytoplasmic 1 1 SSRPAS(1)PCNKR 66.533 0.018203 338460000.0 99059.0 100420.0 81135.0 91965.0 91055.0 82352.0 83080.0 101660.0 109480.0 71637.0 True False 93563.99980077933 95595.67246650708 86365.09192058993 100705.32594971453 98220.51046791946 81838.01062107661 91478.53718266328 101307.36518762242 89601.19176620935 71002.35191274271 1.3177591626227174 1.3463733227314492 1.2163694524757014 1.4183378893346357 1.3833416474517084 1.1526098561023757 1.2883874226460057 1.4268170343444764 1.2619468137664427 1.0 16.1155791934154 -8.028599173726667 23.685569486570948 0.9999999970876532 1.317005341296675 0.5804307602228924 0.0809709134537598 1206.5448776597257 999248.5916550035 0.07937382935874515 0.02049423462927189 9.362693927992762e-09 8.028599173726667 0.3170053442090217 SSRPFER ddPTM_KYSE-520_SHP099_60min_R1 2 SSRPFER 7 1 Q12789-3;Q12789 Q12789-3 GTF3C1 General transcription factor 3C polypeptide 1 0 ; 89.75200000000001 0.0082779 284140000.0 247700.0 228265.0 175973.0 162031.0 227909.0 223382.0 179699.0 191852.0 198212.0 155790.0 False True 233959.58722229177 217298.8067672498 187316.5011467553 177430.3775236037 245844.14167517485 221987.79007865413 197864.72861323337 191186.51019059352 162221.69731790168 154409.8218027858 1.5151859155767173 1.4072861702074018 1.2131126048833754 1.1490873796242058 1.5921535223916659 1.437653301369519 1.281425794700733 1.2381758359567268 1.0505918303894768 1.0 17.236404997868576 -7.599080202966819 1.58884514282565 0.9971821689157455 1.373589690789127 0.5552688906365937 0.12431272268368938 0.3197578496548073 1.465145175367894 0.12273778910639958 0.038932887562007495 2.5172120208270837e-08 7.599080202966819 0.37640752187338145 SSRPS(ph)MDSEGGSLLLDEDSEVFK ddPTM_KYSE-520_SHP099_60min_R1 3 SSRPSMDSEGGSLLLDEDSEVFK 23 1 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;A0A087WVI1;H0YBP7 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 S(0.001)S(0.001)RPS(0.996)MDS(0.002)EGGSLLLDEDSEVFK;S(0.019)S(0.019)RPS(0.96)MDS(0.002)EGGS(0.001)LLLDEDSEVFK;S(0.153)S(0.153)RPS(0.674)MDS(0.009)EGGS(0.011)LLLDEDSEVFK 255.33 1.5957999999999997e-29 1094020000.0 817656.0 788097.0 619399.0 548366.0 578969.0 795955.0 623788.0 721456.0 936790.0 723081.0 True False 772298.9917231734 750235.6371622867 659326.4506134399 600482.53976775 624530.566417009 790987.1496004837 686846.5786242086 718953.4375250959 766692.5505541404 716675.0648885055 1.077613872115561 1.0468281567449291 0.9199796154705236 0.8378727950597362 0.8714277878694836 1.1036900659067008 0.9583793441049363 1.0031790873552227 1.0697910226211318 1.0 19.45095963446707 -6.259534376826822 24.999246118701794 1.0229173095893451 0.9481026282794167 0.19604449876873586 0.07690369489641874 349.0226273142234 4580208.316433357 0.0289076312717943 0.027605033113376386 5.501303729045373e-07 6.259534376826822 -0.07481468130992841 SSRS(ph)S(ph)PELTR ddPTM_KYSE-520_SHP099_60min_R1 1 SSRSSPELTR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.03)S(0.324)RS(0.728)S(0.918)PELTR 154.36 0.00028935 1767400000.0 1762800.0 1747700.0 1554200.0 1640400.0 1672100.0 1694300.0 1695700.0 1680600.0 2090700.0 1709700.0 True False 1665013.9699453206 1663737.8686488187 1654386.2188079224 1796303.1227957578 1803684.7570524183 1683725.2452313271 1867117.9044371976 1674770.3908549882 1711081.5822580722 1694553.3881264722 0.982568021528191 0.9818149609840716 0.9762963093402686 1.060045163157581 1.0644012573995107 0.9936100314271498 1.1018348064568892 0.9883255391006851 1.0097537169660225 1.0 20.692473660009735 -5.245360116096673 24.507928781732875 1.0334201323347305 0.9803852750034724 0.3166502451559091 0.034158732175140274 742.8298167860913 1132215.5601344942 0.009156288886858653 0.01578717785420965 5.6838143466520035e-06 5.245360116096673 -0.05303485733125812 SSS(ph)APLIHGLSDLSQVFQPYTLR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSAPLIHGLSDLSQVFQPYTLR 23 0 Q7Z309;Q7Z309-2;G1UD79;Q7Z309-4;Q7Z309-3 Q7Z309 FAM122B;SPACIA2 Protein FAM122B 1 S(0.123)S(0.123)S(0.749)APLIHGLS(0.004)DLSQVFQPYTLR;S(0.037)S(0.037)S(0.926)APLIHGLSDLSQVFQPYTLR;S(0.106)S(0.106)S(0.787)APLIHGLSDLSQVFQPYTLR 268.83 9.874499999999999e-38 1453573000.0 180890.0 235823.0 224595.0 271576.0 200993.0 233860.0 216078.0 180051.0 222533.0 161888.0 True False 170855.6711047248 224493.7091024607 239072.75306470596 297386.5013876981 216810.00560626556 232400.3929940378 237921.27295805915 179426.44510521917 182126.6168004188 160453.79826695827 1.0648278379827458 1.399117450176871 1.4899787705052878 1.8534089226913486 1.3512301232379897 1.448394463105055 1.4828023738161238 1.1182436753955476 1.1350720192824724 1.0 17.291798415979535 -7.28579608276477 6.291937328901324 1.0916324968387008 1.454542846812527 0.4409400766422541 0.18376045257211904 0.18448147489659714 27.690968479339322 0.10389995982744174 0.05111864243107097 5.1784992446485e-08 7.28579608276477 0.3629103499738262 SSS(ph)APNVHINTIEPVNIDDLIR ddPTM_KYSE-520_SHP099_60min_R1 7 SSSAPNVHINTIEPVNIDDLIR 22 0 H7C560;A0A2U3TZI2;A0A2R8Y8E0;P15056;A0A2R8YDP5;A0A2R8Y679;A0A2R8Y492 H7C560 BRAF Serine/threonine-protein kinase B-raf 1 S(0.101)S(0.101)S(0.798)APNVHINTIEPVNIDDLIR;S(0.02)S(0.02)S(0.959)APNVHINTIEPVNIDDLIR;S(0.118)S(0.118)S(0.765)APNVHINTIEPVNIDDLIR;S(0.123)S(0.123)S(0.754)APNVHINTIEPVNIDDLIR;S(0.302)S(0.302)S(0.395)APNVHINTIEPVNIDDLIR;S(0.11)S(0.11)S(0.779)APNVHINTIEPVNIDDLIR;S(0.111)S(0.111)S(0.778)APNVHINTIEPVNIDDLIR 269.19 2.6300999999999997e-36 8592740000.0 694893.0 774358.0 691981.0 689219.0 598770.0 687683.0 522323.0 567354.0 775647.0 590999.0 True False 656345.9000551469 737156.679344945 736587.202468747 754722.1665387508 645889.7924647311 683390.9153139425 575124.5062212355 565385.9813954198 634809.0572696836 585763.208650265 1.12049696935989 1.2584550693163639 1.2574828729274679 1.2884424207484908 1.1026465693415806 1.1666675291687139 0.9818378787333818 0.9652125176967002 1.0837298210183457 1.0 19.15995805590146 -6.4177900382959905 1.4922581253473362 1.004760983692446 1.2282664975848465 0.6812386398431463 0.0637822655268418 0.2242937010738022 1.0039330047828645 0.0306829085408396 0.024540897070318667 3.8212896823182075e-07 6.4177900382959905 0.22350551389240048 SSS(ph)ASS(ph)PEMK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.004)S(0.018)S(0.958)AS(0.021)S(0.998)PEMK;SS(0.015)S(0.985)AS(0.003)S(0.997)PEMK 158.42 0.00034349 250000000.0 1667620.0 1516750.0 1466710.0 1597530.0 1583040.0 1758010.0 1844140.0 1656410.0 2104010.0 1672490.0 True False 1575113.794281946 1443883.0533118346 1561256.473418975 1749358.7708850922 1707616.2417345021 1747037.6074893037 2030563.668271987 1650664.3003190006 1721974.8217758692 1657673.0397775322 0.9501956999272511 0.8710300636279943 0.9418361980650317 1.0553099006302622 1.030128499866097 1.0539096465752769 1.2249482374066352 0.9957719409736722 1.0387903889701715 1.0 20.66072804635807 -5.2131129958799 3.141591117069319 1.0640461714339429 0.909001272061414 0.4954610692049659 0.06308262338282451 0.2065771156927813 4.093346994114945 0.018440776089361257 0.03356591101003889 6.121910895149459e-06 5.2131129958799 -0.15504489937252885 SSS(ph)ASSPEMK ddPTM_KYSE-520_SHP099_60min_R1 5 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SS(0.001)S(0.998)AS(0.001)SPEMK;SSS(1)ASSPEMK;SS(0.021)S(0.969)AS(0.009)SPEMK;SS(0.014)S(0.973)AS(0.014)SPEMK;SS(0.021)S(0.978)ASSPEMK 240.05 1.2984e-13 4937470000.0 11253920.0 10215610.0 9506950.0 9053410.0 9117870.0 11049590.0 10771310.0 11455820.0 13825920.0 11691590.0 True False 10629642.623466678 9724836.761656782 10119783.208657825 9913843.364393026 9835394.495416274 10980625.410172714 11860179.13265519 11416082.434228485 11315481.451080294 11588011.60851938 0.9172965114784558 0.839215310632515 0.8732976416090117 0.8555258399210158 0.8487560098908944 0.9475849508210603 1.0234869909808957 0.985163185876989 0.9764817151858283 1.0 23.46612969918145 -6.438064416353196 3.71898313406845 0.9946214085337367 0.8653929981475476 0.8764216071727939 0.02300025538721313 0.07611400833505655 1.9734523134853588 0.00844921924565318 0.0071796153014064374 3.646998491241868e-07 6.438064416353196 -0.12922841038618915 SSS(ph)DEQGLSYSSLK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSDEQGLSYSSLK 14 0 Q9NPH3 Q9NPH3 IL1RAP Interleukin-1 receptor accessory protein 1 SS(0.024)S(0.975)DEQGLSYSSLK 201.3 3.4621e-11 360450000.0 1032400.0 1109400.0 872040.0 1292300.0 1304100.0 1185600.0 1280700.0 1630500.0 1848800.0 1108400.0 True False 975130.7139616223 1056102.7587566508 928253.0937133329 1415119.8034558378 1406725.2506859982 1178200.2306240092 1410165.6544275035 1624844.176061562 1513104.5244553143 1098580.438322151 0.88762796054418 0.9613340288214344 0.8449568746472883 1.2881349003602627 1.280493627607709 1.0724751593278508 1.2836253088405913 1.4790397856921313 1.377327022831629 1.0 20.067209077428405 -5.265337369416062 24.740264578483067 1.2691217326958608 0.9043090512233568 0.6029850603828266 0.13214550135854428 193.48169342233933 1228016.564880837 0.03822134127598182 0.05918514571407395 5.428284866687912e-06 5.265337369416062 -0.364812681472504 SSS(ph)DNNTNTLGR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSDNNTNTLGR 12 0 A0A087X2H1;Q9ULT8;H0YJP0;H0YJ72 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 S(0.015)S(0.014)S(0.971)DNNTNTLGR 111.66 0.016799 0.0 229260.0 215960.0 218890.0 189670.0 205670.0 218490.0 193050.0 213200.0 263170.0 200060.0 True False 216542.49078152058 205584.9574374311 232999.99963638294 207696.17977363488 221855.05889777586 217126.32286524985 212565.37798643694 212460.458961254 215384.9619758252 198287.62404432462 1.0920625622762787 1.0368017592034653 1.1750607268575612 1.0474490315502853 1.1188547947308252 1.0950069320348208 1.0720052701772287 1.071476144742958 1.0862249372037394 1.0 17.597235110213045 -9.51242411689446 0.4561481275541166 0.9805948501677637 1.0935374022221758 0.3541056583166131 0.036312766623476704 9.635118747745086 1.80878372581235 0.3251286874784646 0.019285708743735405 3.073094271848165e-10 9.51242411689446 0.11294255205441206 SSS(ph)DPPAVHPPLPPLR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSDPPAVHPPLPPLR 16 0 O43150 O43150 ASAP2 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 1 S(0.13)S(0.13)S(0.739)DPPAVHPPLPPLR 178.02 1.0016e-08 1293400000.0 1613200.0 1493500.0 1454700.0 1394300.0 1533400.0 1493300.0 1287200.0 1387900.0 1756500.0 1450000.0 True False 1523712.5801655285 1421750.0182107973 1548472.2896022932 1526813.852788421 1654069.856147466 1483979.7607884903 1417322.7378613902 1383085.6988382956 1437563.8777616625 1437154.1280829308 1.0602290668698569 0.9892815185433997 1.0774573578046591 1.0623869931230623 1.1509342135445741 1.03258219267548 0.9862009301340598 0.9623781275869423 1.00028511185455 1.0 20.45478336173665 -6.623236530093658 4.270279928386651 0.9844666736554386 1.0661603458152664 0.498320956284407 0.03796574194995258 0.1973298001268331 6.494350270873503 0.016045463353881472 0.012202089349906122 2.381022338376134e-07 6.623236530093658 0.08169367215982781 SSS(ph)EDKITVHFINR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSEDKITVHFINR 14 1 P10109 P10109 FDX1 Adrenodoxin, mitochondrial 1 S(0.01)S(0.096)S(0.894)EDKITVHFINR 124.84 4.6958e-05 704600000.0 298050.0 324520.0 294540.0 244960.0 327830.0 278280.0 273550.0 329900.0 387130.0 340250.0 True False 281516.572352055 308929.572085549 313526.5196806625 268240.92475009075 353628.35590245505 276543.15129727556 301203.1035907267 328755.6538992387 316836.9507531299 337235.6497104946 0.8347770248896504 0.9160643969602698 0.9296956592513703 0.7954109388505234 1.048609054843499 0.8200294112875626 0.8931532115578509 0.974854390932466 0.9395120326843371 1.0 18.363397528338346 -13.999790018707708 0.0630751930198398 1.3790838382904842 0.7575533664240488 0.21438694083553367 0.0684903328151416 595.9683181030065 2.7286822341367896 33.38142557872088 5.076569283402952 1.0004836166983041e-14 13.999790018707708 -0.6215304718664354 SSS(ph)ETILSSLAGSDIVK ddPTM_KYSE-520_SHP099_60min_R1 6 SSSETILSSLAGSDIVK 17 0 Q01850 Q01850 CDR2 Cerebellar degeneration-related protein 2 1 SS(0.021)S(0.979)ETILSSLAGSDIVK;SS(0.023)S(0.977)ETILSSLAGSDIVK;S(0.061)S(0.274)S(0.665)ETILSSLAGSDIVK;SSS(0.999)ETILSSLAGSDIVK;SS(0.023)S(0.977)ETILSSLAGSDIVK;S(0.093)S(0.093)S(0.814)ETILSSLAGSDIVK 462.29 1.5712999999999996e-136 4974270000.0 4039320.0 4222690.0 2928460.0 2572200.0 2468290.0 3825080.0 2914550.0 3832350.0 4290310.0 3852600.0 True False 3815250.8674152116 4019825.634013088 3117233.217301666 2816661.114639871 2662530.3803510075 3801206.2568786214 3209181.157266866 3819056.4723272095 3511297.853913829 3818468.9612774416 0.9991572292730767 1.052732305742845 0.8163568301623219 0.7376414848996381 0.6972769472140156 0.9954791555008359 0.8404366225863618 1.0001538603706683 0.9195564739484354 1.0 21.86456286603188 -7.262531172301118 24.999836016667082 0.9698913775721675 0.8737203244646256 0.13776947413978224 0.11000407437617774 231.18493372439934 5293499.927326529 0.062117544498659236 0.032473542210560154 5.463473333697228e-08 7.262531172301118 -0.09617105310754193 SSS(ph)FGSVSTSSNSSK ddPTM_KYSE-520_SHP099_60min_R1 8 SSSFGSVSTSSNSSK 15 0 E5RGS8;E5RH07;E5RGQ6;A0A0C4DGW2;P57768-2;P57768;E5RG30;E5RJ65;E5RHF1 E5RGS8 SNX16 Sorting nexin-16 1 SS(0.008)S(0.991)FGS(0.001)VSTSSNSSK;SS(0.005)S(0.994)FGSVSTSSNSSK;S(0.004)S(0.004)S(0.992)FGSVSTSSNSSK;S(0.094)S(0.094)S(0.812)FGSVSTSSNSSK;SS(0.002)S(0.998)FGSVSTSSNSSK;SS(0.001)S(0.999)FGSVSTSSNSSK;S(0.002)S(0.002)S(0.996)FGSVSTSSNSSK;SSS(1)FGSVSTSSNSSK 392.56 5.663199999999999e-82 7758150000.0 15220400.0 16365300.0 12581350.0 12276590.0 11914880.0 15575600.0 13189020.0 16659500.0 19186000.0 15397100.0 True False 14376094.070884826 15579086.423183912 13392363.951871756 13443353.422508623 12852513.269606322 15478386.902924538 14522294.854030939 16601712.082856521 15702306.039701266 15260693.672762545 0.9420341158241999 1.0208635830879456 0.8775724248875132 0.8809136537811822 0.8421971861309051 1.0142649629715412 0.9516143345404077 1.0878740140421952 1.0289378960359394 1.0 23.863317205381982 -6.747392365807777 1.8175394144304062 1.0371956159225073 0.9181073081262797 0.42992788334804444 0.05673229197803307 0.343552838956084 2.322670642719941 0.031220603129081644 0.019722685469859638 1.7889888515966505e-07 6.747392365807777 -0.11908830779622759 SSS(ph)FSLPSR ddPTM_KYSE-520_SHP099_60min_R1 5 SSSFSLPSR 9 0 Q14153-2;Q14153 Q14153-2 FAM53B Protein FAM53B 1 S(0.003)S(0.041)S(0.937)FS(0.02)LPSR;SS(0.01)S(0.989)FS(0.002)LPSR;SS(0.011)S(0.989)FSLPSR;SS(0.016)S(0.984)FSLPSR;SS(0.011)S(0.989)FSLPSR 205.18 7.2684e-07 1523100000.0 6394500.0 5533030.0 5131330.0 4988320.0 5374200.0 5319060.0 4955600.0 5538640.0 6646380.0 5477520.0 True False 6039784.337880286 5267214.933552657 5462103.742218282 5462408.433006905 5797118.964984812 5285861.773534876 5456560.409995265 5519427.750568298 5439564.93360521 5428993.43424607 1.1125053678977304 0.9702010137509258 1.0060987931507437 1.0061549160384047 1.067807326569343 0.973635690953627 1.0050777323795057 1.0166576580755777 1.0019472300873409 1.0 22.37225330841584 -6.284026991387307 24.932100680479678 1.0008556504714932 1.026153175831291 0.15145103265464765 0.03759641399284169 1959.8273561837898 2163245.7598286094 0.013024188509257332 0.0114922071510597 5.19963679804236e-07 6.284026991387307 0.02529752535979779 SSS(ph)FVLPK ddPTM_KYSE-520_SHP099_60min_R1 5 SSSFVLPK 8 0 Q8WYP3;Q8WYP3-2 Q8WYP3 RIN2 Ras and Rab interactor 2 1 SSS(1)FVLPK;SS(0.001)S(0.999)FVLPK;SSS(1)FVLPK;SSS(1)FVLPK;SSS(1)FVLPK 204.79 9.9151e-07 4636680000.0 8645870.0 9268260.0 8317380.0 7960880.0 8068800.0 7676370.0 7828180.0 8650060.0 9767960.0 8750750.0 True False 8166266.355985455 8822998.877658108 8853531.623078538 8717479.64167415 8703768.654808063 7628458.927425131 8619528.83007441 8620054.960799184 7994344.694233306 8673225.16298049 0.941548985819155 1.0172685145217826 1.0207888595891228 1.0051024247453588 1.003521584099758 0.8795412068840684 0.9938089543512293 0.9938696158369957 0.9217268713782716 1.0 23.048137132716946 SSS(ph)KESLVR ddPTM_KYSE-520_SHP099_60min_R1 5 SSSKESLVR 9 1 E7EVX2;Q13439-3;Q13439-4;Q13439;Q13439-5;Q86W71 E7EVX2 GOLGA4 Golgin subfamily A member 4 1 S(0.003)S(0.104)S(0.839)KES(0.054)LVR;S(0.033)S(0.287)S(0.632)KES(0.049)LVR;S(0.007)S(0.063)S(0.925)KES(0.005)LVR;S(0.002)S(0.079)S(0.919)KESLVR;S(0.002)S(0.095)S(0.902)KESLVR 143.97 0.00023845 32920300000.0 32587200.0 28321900.0 26217200.0 25234400.0 26248400.0 26600000.0 25708100.0 26435700.0 32965800.0 24566700.0 True False 30779523.055027302 26961273.4119614 27907202.661003154 27632669.78900102 28313999.74703353 26433979.533231024 28306925.634877574 26344000.726838782 26980041.720190976 24349058.150603358 1.2640950161049496 1.1072819837712413 1.146130683511125 1.1348557968069208 1.1628375755606761 1.085626366725647 1.162547046370093 1.0819309956014045 1.1080527859974914 1.0 24.53736263250546 -13.999999951276687 0.04049756501950679 0.3530279510802073 1.508366823770651 0.6086567614943179 0.040716556062132384 569.0748448270735 1.716829641473792 44.43866346064062 13.142739862091792 1.0000001121895814e-14 13.999999951276687 1.1553388726904437 SSS(ph)KGSVEEIMSQPK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSKGSVEEIMSQPK 15 1 A0A087WVA8;Q8IWB9;Q8IWB9-2;J3KRZ8 A0A087WVA8 TEX2 Testis-expressed sequence 2 protein 1 S(0.042)S(0.031)S(0.896)KGS(0.031)VEEIMSQPK 221.47 3.7757999999999995e-14 366260000.0 250800.0 265360.0 189100.0 187710.0 177940.0 205420.0 177350.0 206100.0 249100.0 164260.0 True False 236887.62404259498 252611.70728651964 201289.68857069756 205549.90196293066 191942.86565989326 204137.89758332015 195278.26876920252 205385.0872041016 203869.7192999884 162804.78419234607 1.4550409265781992 1.551623366227807 1.2363868148547983 1.2625544327989973 1.178975584852113 1.2538814420965725 1.1994627168848464 1.2615420868802538 1.2522342037512 1.0 17.31278356979747 -1.0000000000000002 0.3094297434863267 1.1529993211562155 4.57538565692342 0.6201599427503239 0.08744500174085905 36.75255298035566 0.5250682211070165 0.08529880196871158 70.36712670805333 0.09999999999999995 1.0000000000000002 3.4223863357672046 SSS(ph)KSEGSPSQR ddPTM_KYSE-520_SHP099_60min_R1 7 SSSKSEGSPSQR 12 1 O95819-3;E7EX83;G5E948;C9J840;H7C360;E7ENQ1;H7C0P6;G3XAA2;A0A0D9SG62;A0A0D9SEY1;O95819-4;O95819-2;O95819;O95819-5;O95819-6;E7EN19 O95819-3 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 SS(0.007)S(0.984)KS(0.007)EGS(0.002)PSQR;S(0.005)S(0.029)S(0.947)KS(0.019)EGSPSQR;SS(0.01)S(0.988)KS(0.002)EGSPSQR;S(0.026)S(0.226)S(0.743)KS(0.006)EGSPSQR;S(0.007)S(0.03)S(0.962)KS(0.002)EGSPSQR;S(0.177)S(0.177)S(0.644)KS(0.002)EGSPSQR;S(0.155)S(0.155)S(0.688)KS(0.001)EGSPSQR 194.83 9.6905e-08 5752680000.0 1364494.0 1191056.0 1026555.0 1383535.0 1272381.0 1419109.0 1544278.0 1172876.0 1673450.0 1570397.0 True False 1288802.797768647 1133835.8819484946 1092728.3778460748 1515025.7504250326 1372510.1458424213 1410251.8143392438 1700388.6909408902 1168807.5669073153 1369593.664241533 1556484.5043303773 0.8280216052154719 0.7284594731229191 0.7020489923323603 0.9733638505298317 0.8818013555701253 0.9060493762807841 1.0924546220731073 0.7509278528989619 0.8799275935167453 1.0 20.569859783370585 -5.2604552756159535 24.99705998357644 0.9202002996432644 0.7504049643454634 0.44138968778696985 0.08925241965092263 85.22042058657614 2164640.4597009085 0.02487996360930723 0.04010554161447361 5.489650860539958e-06 5.2604552756159535 -0.169795335297801 SSS(ph)LDMNR ddPTM_KYSE-520_SHP099_60min_R1 5 SSSLDMNR 8 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.002)S(0.016)S(0.982)LDMNR;S(0.067)S(0.363)S(0.57)LDMNR;S(0.001)S(0.046)S(0.953)LDMNR;S(0.001)S(0.06)S(0.939)LDMNR;S(0.003)S(0.052)S(0.944)LDMNR 153.97 0.00033756 6724400000.0 12292260.0 10997200.0 11099680.0 10216380.0 11063150.0 10586450.0 10417480.0 10304540.0 12541030.0 10769630.0 True False 11610383.833787188 10468878.004866272 11815183.13291594 11187341.683533356 11933756.964287104 10520376.038705755 11470580.543207172 10268795.95583772 10263895.085639242 10674219.456845365 1.0877033098978925 0.9807628601970134 1.1068896588348551 1.0480711708019947 1.1179980899337796 0.9855873847486852 1.074606025253781 0.9620184405382776 0.9615593090562717 1.0 23.347627242075156 -7.265490921627686 24.904807011873746 0.9713416495666516 1.0555447954937707 0.42434827417402543 0.04413656148184562 310.03254947602056 1905745.167691283 0.021966077721816392 0.011158313882328375 5.426365943364707e-08 7.265490921627686 0.08420314592711908 SSS(ph)LEMTPYNTPQLS(ph)PATTPANKK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSLEMTPYNTPQLSPATTPANKK 24 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7;B4DGD8;A0A0A0MQV8;B0QZ65 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 2 S(0.278)S(0.33)S(0.392)LEMTPYNTPQLS(0.999)PATTPANKK;S(0.084)S(0.106)S(0.81)LEMTPYNTPQLS(0.999)PAT(0.001)TPANKK 218.19 3.0114e-21 2287970000.0 1025110.0 885910.0 798750.0 658220.0 697850.0 705230.0 550590.0 643330.0 902410.0 692150.0 True False 968245.1047938784 843349.5538219792 850238.7030451867 720777.0308989404 752766.8247766457 700828.3979782142 606249.0104405714 641098.43838435 738555.0919048676 686018.0894845511 1.411398794923006 1.229340110339716 1.2393823371101262 1.0506676747263413 1.0972987976778386 1.0215888016958723 0.8837216098719564 0.9345211856819227 1.0765825321891889 1.0 19.38788709349608 -4.668096339619075 0.6254846319860973 0.9678844617143822 1.5398002496810324 0.838386110707131 0.06045104190925396 0.8629127157333927 0.3598281634042254 0.03224587138175862 0.33051440149488476 2.1473540733717052e-05 4.668096339619075 0.5719157879666501 SSS(ph)LGNLK ddPTM_KYSE-520_SHP099_60min_R1 9 SSSLGNLK 8 0 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;H0YGH8;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.005)S(0.046)S(0.949)LGNLK;S(0.045)S(0.306)S(0.649)LGNLK;SS(0.003)S(0.997)LGNLK;SSS(1)LGNLK;SS(0.015)S(0.985)LGNLK;SSS(1)LGNLK;SS(0.016)S(0.984)LGNLK;SS(0.003)S(0.997)LGNLK;SSS(1)LGNLK 155.11 0.00031368 28199240000.0 65480000.0 57719100.0 50755300.0 52672500.0 59336800.0 55901100.0 61559400.0 67727800.0 65965300.0 63003400.0 True False 61847693.868856184 54946187.79786454 54027067.84935126 57678478.56343537 64006268.57979071 55552200.4994398 67782424.91384739 67492868.06958728 53987664.36988969 62445238.89190351 0.990430895394896 0.879909962278785 0.8651911468042485 0.9236649516751838 1.0249983780282983 0.8896146685514971 1.0854698631417339 1.0808328908216929 0.8645601382572273 1.0 25.89608824262782 -5.648221886851968 5.799188389441831 0.9943723690546392 0.9065792332645074 0.20320125222773866 0.07354265741762334 0.3158915037300649 14.859698804096919 0.021947157727481993 0.02840048759478043 2.247905827283665e-06 5.648221886851968 -0.08779313579013182 SSS(ph)LGNLKK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSLGNLKK 9 1 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;H0YGH8;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 S(0.002)S(0.164)S(0.834)LGNLKK;S(0.001)S(0.068)S(0.931)LGNLKK 146.36 0.00021495 3987400000.0 3864100.0 3999100.0 3482800.0 3361600.0 3787100.0 3378500.0 3231800.0 3522500.0 4338800.0 3674900.0 True False 3649750.6701076245 3806977.2332285168 3707306.8606770304 3681085.4532981035 4085123.2243485493 3357413.5283090533 3558501.8833284965 3510281.2696576817 3550983.2922472507 3642343.245028938 1.0020336976996322 1.0452000201859808 1.0178356654707803 1.0106366165028626 1.1215645944197918 0.9217729638444273 0.9769814770162399 0.9637425782011362 0.9749172588535209 1.0 21.796435453903406 -6.2839319844424795 24.999986408738085 0.9658104342946202 1.0369713534924774 0.5015653098223425 0.035811025384408765 681.1287697545376 757055.7123583733 0.012243838012727567 0.010805106438317376 5.200774403204775e-07 6.2839319844424795 0.07116091919785716 SSS(ph)LIQLTSQNSSPNQQR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSLIQLTSQNSSPNQQR 18 0 O95639;H7C419 O95639 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 1 SS(0.009)S(0.99)LIQLTSQNSSPNQQR;S(0.003)S(0.003)S(0.995)LIQLTSQNSSPNQQR;S(0.001)S(0.033)S(0.967)LIQLTSQNSSPNQQR 330.27 1.6013999999999999e-53 1242340000.0 908680.0 894150.0 616160.0 554046.0 604990.0 965410.0 609320.0 910240.0 982870.0 869370.0 True False 858273.7089913287 851193.6918534876 655878.6594908574 606702.3652599959 652599.2710777723 959384.5180893445 670916.0119901354 907082.5898916124 804405.5841364095 861668.0581596257 0.9960607229940184 0.9878440819443748 0.7611732305497096 0.7041021882090042 0.7573673700654654 1.1134038322581252 0.7786246752874839 1.0527053675738942 0.933544624892422 1.0 19.71677267892857 -6.241564753715584 24.97708497077526 0.9666353692696898 0.8373756886518375 0.23626130007862678 0.12012365093446858 1379.0026805268337 1733037.822748856 0.04182333249686335 0.04177160476551434 5.733703701110463e-07 6.241564753715584 -0.1292596806178523 SSS(ph)LKER ddPTM_KYSE-520_SHP099_60min_R1 4 SSSLKER 7 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 S(0.002)SS(0.997)LKER;SS(0.002)S(0.998)LKER;S(0.001)S(0.007)S(0.993)LKER;S(0.011)S(0.016)S(0.974)LKER 109.88 0.004714 10057590000.0 11212300.0 9276200.0 7863960.0 10193900.0 13049100.0 13933000.0 15378100.0 7122180.0 10820600.0 17963700.0 True False 10590331.367834074 8830557.428139936 8370883.444380868 11162725.191092195 14075989.930777295 13846038.97881608 16932668.423792902 7097474.819909302 8855851.805128297 17804555.593547106 0.5948102052978127 0.4959717967541066 0.47015402324418154 0.6269589337651256 0.790583615346111 0.777668327977492 0.9510301077062434 0.39863251753846835 0.4973924655742555 1.0 24.085743090309187 -5.501882355476419 4.885937511087296 0.7185879111483316 0.5204048395854362 0.2338457971051825 0.1737949687226765 0.32478061805842884 20.826292883809547 0.05329168202183164 0.07589265823803072 3.1486011122082376e-06 5.501882355476419 -0.1981830715628955 SSS(ph)LPAYGR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSLPAYGR 9 0 Q08495;Q08495-4;Q08495-2;Q08495-3 Q08495 DMTN Dematin 1 SS(0.001)S(0.999)LPAYGR 208.11 9.639299999999999e-09 308420000.0 504660.0 454260.0 411660.0 421920.0 440300.0 439360.0 408250.0 450360.0 509790.0 431950.0 True False 476665.50378523197 432436.66774183867 438196.2622792878 462019.1499451263 474949.1050356914 436617.79126768274 449519.89413604146 448797.8062748142 417224.9867601008 428123.25905201526 1.1133838064315935 1.0100751561580057 1.0235282783971535 1.079173205791636 1.1093746835604346 1.0198413238151947 1.0499777450339987 1.0482911095944147 0.9745440779927578 1.0 18.707666690741267 -7.713337927546231 6.4457382759256205 0.9873635435809057 1.0553930305780685 0.40012765782332116 0.03400732167840126 0.1832143470723714 17.529293147008463 0.024724029393239855 0.008817646525703137 1.9349158066478664e-08 7.713337927546231 0.06802948699716282 SSS(ph)MAAGLER ddPTM_KYSE-520_SHP099_60min_R1 5 SSSMAAGLER 10 0 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;Q9UQB8-6;I3L0Y9;I3L3C6 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 SSS(1)MAAGLER;SSS(1)MAAGLER;S(0.005)S(0.022)S(0.973)MAAGLER;SSS(1)MAAGLER;SS(0.003)S(0.997)MAAGLER 228.39 9.9513e-10 4238280000.0 5075600.0 4872510.0 4834950.0 4531010.0 4442010.0 4343690.0 4235780.0 5188210.0 5415760.0 5212360.0 True False 4794046.3500422435 4638427.305813383 5146618.613193521 4961635.828102173 4791570.9154203795 4316579.419500008 4663973.979629057 5170213.310447314 4432394.504199545 5166182.545554718 0.9279668900138494 0.8978442524847586 0.9962130776083337 0.960406602815739 0.9274877287376002 0.8355452757305765 0.902789233346431 1.0007802211511214 0.8579631991543607 1.0 22.30066719088958 -10.504225888955371 2.8568232058117027 1.0028723682108747 0.9247663480724211 0.17062488428369238 0.050795152615290246 21002262.375157338 23049424.5611459 474175.54400873336 0.01310384062063715 3.131656436738506e-11 10.504225888955371 -0.07810602013845358 SSS(ph)MADGDNSYCLEAIIR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSMADGDNSYCLEAIIR 18 0 A0A0A0MR36;Q9ULV0-2;Q9ULV0;Q9ULV0-3 A0A0A0MR36 MYO5B Unconventional myosin-Vb 1 S(0.054)S(0.054)S(0.892)MADGDNSYCLEAIIR 267.36 6.032999999999999e-30 214230000.0 291940.0 278710.0 197460.0 201220.0 212390.0 274820.0 275070.0 299780.0 334160.0 304610.0 True False 275745.5062320386 265320.3532477613 210188.58754717084 220343.88830100108 229103.8846662063 273104.7464406972 302876.76002449694 298740.13314917823 273484.9674880939 301911.39238299365 0.9133325644175694 0.8788020589537268 0.6961929653867892 0.7298296581716298 0.7588447817682002 0.9045857603619231 1.0031975197553282 0.9894960597253897 0.905845139958021 1.0 18.203765671249762 -6.456903564461115 3.864846974556782 0.9726519372041331 0.7916487740265342 0.624489384508343 0.06569351568320217 0.1704981526444003 4.984938494015443 0.027357658951427142 0.023093798743586302 3.4921785105485305e-07 6.456903564461115 -0.1810031631775989 SSS(ph)MSSLTGAYTSGIPSSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSMSSLTGAYTSGIPSSSR 20 0 A8CG34-2;A8CG34 A8CG34-2 POM121C Nuclear envelope pore membrane protein POM 121C 1 S(0.003)S(0.003)S(0.994)MSSLTGAYTSGIPSSSR 260.97 3.1401999999999996e-35 344890000.0 193780.0 246520.0 185230.0 178110.0 177090.0 228580.0 220110.0 269190.0 312940.0 262280.0 True False 183030.63710914683 234676.80916593637 197170.2221784789 195037.52084927566 191025.97549573184 227153.34743255394 242360.86686658682 268256.24271941814 256117.98457542498 259956.40325075216 0.7040820492219102 0.9027544858726513 0.7584741891827526 0.7502701161053679 0.7348385079457708 0.8738132417282424 0.9323135104035394 1.0319278131443448 0.9852343753516829 1.0 17.987910166583653 -6.707054137443618 1.9811583466298874 1.0037443160099813 0.7763724892531575 0.7934328650904809 0.052586543866438046 0.14774453446731528 1.1874085029103618 0.025925338803191793 0.01723760788967234 1.9631155473124996e-07 6.707054137443618 -0.22737182675682377 SSS(ph)MSYVDGFIGTWPK ddPTM_KYSE-520_SHP099_60min_R1 5 SSSMSYVDGFIGTWPK 16 0 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 S(0.086)S(0.086)S(0.821)MS(0.004)Y(0.003)VDGFIGTWPK;S(0.135)S(0.135)S(0.729)MSYVDGFIGTWPK;S(0.092)S(0.092)S(0.813)MS(0.002)YVDGFIGTWPK;S(0.107)S(0.107)S(0.785)MSYVDGFIGTWPK;S(0.098)S(0.098)S(0.805)MSYVDGFIGTWPK 279.24 2.9986e-30 5569764000.0 2328270.0 2154710.0 2279890.0 2082888.0 2035700.0 1976082.0 2085320.0 2434430.0 2785470.0 2269070.0 True False 2199116.221808823 2051194.4973143504 2426855.357352976 2280845.0492768865 2195898.008451411 1963748.5392475985 2296124.4963619616 2425985.5305302325 2279698.8639844987 2248967.805109746 0.977833571833417 0.9120604095149577 1.0790974205317936 1.0141741665197315 0.9764025983218799 0.8731777016931422 1.0209681486524946 1.0787106534021054 1.013664517030849 1.0 21.100831577820532 -6.981997837443154 24.96783493559295 1.0376804793608025 0.9739215855752031 0.19797165642104908 0.05509980126011763 372.2475926283128 516282.1864772196 0.0241372308922298 0.01626930120461097 1.0423226195958024e-07 6.981997837443154 -0.0637588937855994 SSS(ph)PAELDLKDDLQQTQGK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPAELDLKDDLQQTQGK 19 1 H7C1F9;Q2PPJ7-3;Q2PPJ7-2;Q2PPJ7 H7C1F9 RALGAPA2 Ral GTPase-activating protein subunit alpha-2 1 S(0.156)S(0.156)S(0.687)PAELDLKDDLQQTQGK 80.835 0.0031544 466860000.0 616240.0 485520.0 451140.0 493240.0 504480.0 596600.0 563120.0 645050.0 788760.0 598860.0 True False 582055.9387560162 462194.8904196218 480221.2062495223 540117.3813019863 544179.7059014438 592876.3981024664 620045.6651215863 642812.4721058015 645541.0670215137 593554.5663060299 0.980627513959542 0.7786898065599573 0.8090599137972527 0.9099708973066984 0.9168149598917769 0.9988574458995673 1.0446312779302214 1.0829879990753448 1.0875850404774414 1.0 19.179021139384805 -6.231909481662962 1.3192195079904288 1.0647046078425286 0.8535623225672077 0.6982599679836665 0.055509398139294626 0.2273601199058493 0.8038289369004474 0.02612361914534213 0.02415921664174938 5.862603437810409e-07 6.231909481662962 -0.21114228527532097 SSS(ph)PAGETEGDREPQAR ddPTM_KYSE-520_SHP099_60min_R1 9 SSSPAGETEGDREPQAR 17 1 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.133)S(0.133)S(0.706)PAGET(0.028)EGDREPQAR;S(0.017)S(0.017)S(0.965)PAGETEGDREPQAR;S(0.118)S(0.118)S(0.753)PAGET(0.012)EGDREPQAR;SS(0.002)S(0.941)PAGET(0.057)EGDREPQAR;S(0.002)S(0.127)S(0.871)PAGETEGDREPQAR;S(0.001)S(0.033)S(0.966)PAGETEGDREPQAR;S(0.007)S(0.028)S(0.965)PAGETEGDREPQAR;S(0.002)S(0.048)S(0.95)PAGETEGDREPQAR;S(0.109)S(0.109)S(0.781)PAGETEGDREPQAR 209.31 1.0765e-17 7794960000.0 2192321.0 1941051.0 1774855.0 1994104.0 1958656.0 1955926.0 2063692.0 2324792.0 2259925.0 2206843.0 True False 2070708.5838464343 1847799.9963830505 1889264.9931684064 2183623.04461077 2112791.0839718073 1943718.3403200882 2272310.1270530177 2316727.8391625304 1849579.5880731703 2187292.0879178713 0.9466996178903498 0.8447888631746524 0.86374609207627 0.998322563626793 0.9659391608658069 0.8886414169633622 1.0388690836513184 1.0591762535784015 0.8456024681339306 1.0 21.06071445804726 -5.258221597809986 24.908464917283588 0.9725949487709972 0.881049254531421 0.26638281854781 0.0651500602051165 343.56737923723557 2659499.886233982 0.01784686542221483 0.02933704611500291 5.517958148294933e-06 5.258221597809986 -0.09154569423957615 SSS(ph)PAGETEGDREPQARPGEGTAPLPPPGQK ddPTM_KYSE-520_SHP099_60min_R1 4 SSSPAGETEGDREPQARPGEGTAPLPPPGQK 31 2 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 S(0.313)S(0.313)S(0.373)PAGETEGDREPQARPGEGTAPLPPPGQK;S(0.003)S(0.066)S(0.799)PAGET(0.132)EGDREPQARPGEGTAPLPPPGQK;S(0.146)S(0.146)S(0.708)PAGETEGDREPQARPGEGTAPLPPPGQK;S(0.033)S(0.033)S(0.746)PAGET(0.188)EGDREPQARPGEGTAPLPPPGQK 236.31 4.607899999999999e-31 3256430000.0 1542640.0 1499940.0 1322210.0 1081410.0 1233820.0 1292610.0 1180090.0 1327360.0 1708800.0 1356000.0 True False 1457066.6840234015 1427880.630944158 1407441.772210801 1184186.8812622286 1330914.6145244997 1284542.3415206666 1299385.0137685253 1322755.6979681542 1398524.9953425147 1343986.8949520362 1.0841375682278516 1.062421543176666 1.0472139107137866 0.8811000209228153 0.9902735060314685 0.955769990276958 0.9668137529085783 0.9842028243998319 1.040579339423116 1.0 20.358087639970694 -5.022587460128496 24.027078050629605 0.9723689244550261 1.0686641362795972 0.5431145889530725 0.0384597798218794 324.3579159116602 345031.83131976705 0.010372547201765173 0.018169455082714003 9.493198017633598e-06 5.022587460128496 0.09629521182457113 SSS(ph)PALKPKPNPPS(ph)PENTASSAPVDWR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPALKPKPNPPSPENTASSAPVDWR 27 2 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 2 S(0.092)S(0.429)S(0.479)PALKPKPNPPS(0.947)PENT(0.041)AS(0.009)S(0.002)APVDWR;S(0.133)S(0.156)S(0.711)PALKPKPNPPS(0.965)PENT(0.034)AS(0.001)SAPVDWR 112.09 0.00035874 1136520000.0 462360.0 401710.0 329310.0 417470.0 437420.0 408470.0 379760.0 415730.0 506840.0 396380.0 True False 436711.9691081913 382411.248620997 350537.8495146295 457146.2232830682 471842.4654206506 405920.5872157466 418149.84690043575 414287.9296621111 414810.6323966526 392868.3815789735 1.111598666589066 0.9733826048409691 0.8922526371447512 1.163611643792143 1.2010191900001552 1.0332228457386037 1.0643509798875994 1.0545209263139235 1.0558514043036276 1.0 18.58368653743635 -5.269177076082334 24.931811061354896 1.086285201258536 0.990508431693354 0.22758290235862477 0.07512034504989484 806.6646927476363 2599172.268259288 0.022062714316285304 0.03338663967763086 5.38050357035479e-06 5.269177076082334 -0.095776769565182 SSS(ph)PALKPKPNPPSPENTASSAPVDWRDPSQMEK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPALKPKPNPPSPENTASSAPVDWRDPSQMEK 34 3 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 S(0.148)S(0.148)S(0.703)PALKPKPNPPSPENTASSAPVDWRDPSQMEK 149.03 1.1024e-06 783210000.0 566760.0 565150.0 458240.0 452620.0 444870.0 459860.0 376390.0 452840.0 627180.0 460620.0 True False 535320.6929919511 537999.3456925552 487778.8836099238 495636.86871483515 479878.73803594895 456989.8431635941 414439.1744124053 451269.20373365004 513299.9219211842 456539.26515693776 1.1725622172014751 1.17842951691705 1.068427013484256 1.085639081984454 1.0511225970256646 1.0009869425064708 0.9077842937998765 0.9884564990889094 1.1243280941995968 1.0 18.800379420541386 -5.097469484424545 0.8881637386684943 1.0009502458808484 1.1990440142103298 0.5743782374391657 0.053385908547867934 0.6392807047415524 0.8315147066339257 0.023141471177924956 0.09723780642697684 7.989700790953655e-06 5.097469484424545 0.19809376832948145 SSS(ph)PAPADIAQTVQEDLR ddPTM_KYSE-520_SHP099_60min_R1 16 SSSPAPADIAQTVQEDLR 18 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 S(0.027)S(0.027)S(0.946)PAPADIAQTVQEDLR;S(0.015)S(0.015)S(0.97)PAPADIAQTVQEDLR;S(0.155)S(0.155)S(0.689)PAPADIAQTVQEDLR;SS(0.001)S(0.999)PAPADIAQTVQEDLR;S(0.002)S(0.005)S(0.994)PAPADIAQTVQEDLR;S(0.002)S(0.001)S(0.997)PAPADIAQTVQEDLR;SS(0.016)S(0.984)PAPADIAQTVQEDLR;SS(0.004)S(0.996)PAPADIAQTVQEDLR;S(0.13)S(0.13)S(0.74)PAPADIAQTVQEDLR;SSS(1)PAPADIAQTVQEDLR;SSS(1)PAPADIAQTVQEDLR;S(0.028)S(0.167)S(0.805)PAPADIAQTVQEDLR;SS(0.003)S(0.997)PAPADIAQTVQEDLR;S(0.02)S(0.076)S(0.904)PAPADIAQTVQEDLR;SS(0.004)S(0.995)PAPADIAQTVQEDLR;S(0.087)S(0.087)S(0.826)PAPADIAQTVQEDLR 446.5 9.4127e-119 555981520000.0 26507044.0 30567799.0 23060364.0 17918489.0 20345136.0 27854411.0 20321006.0 24803439.0 31482991.0 29078915.0 True False 25036645.428837825 29099276.052838262 24546871.961326968 19621456.807169862 21946182.45521104 27680561.288879875 22375251.600386668 24717401.659275204 25766473.456017923 28821298.436153565 0.8686855480956315 1.0096448679194827 0.8516920920722733 0.6807971143505672 0.7614571045030244 0.96042034158174 0.7763443291756437 0.8576088864986591 0.8940080722975459 1.0 24.780631996434916 -9.958532858107064 9.432169614776754 0.9999961034060375 0.8494095493024125 0.19543705096872632 0.09051855998827649 0.0 7.380186024199835e-11 0.09343052017799094 0.022660229608838758 1.1001886034310631e-10 9.958532858107064 -0.15058655410362498 SSS(ph)PAPRTK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPAPRTK 9 1 Q8IZD2-6 Q8IZD2-6 1 S(0.013)S(0.425)S(0.56)PAPRT(0.001)K 50.193999999999996 0.050526 408220000.0 171940.0 176740.0 157040.0 155360.0 198600.0 188020.0 166040.0 160500.0 195060.0 139170.0 True False 162402.14544610772 168249.14510785142 167163.04967288396 170125.3676893128 214228.69012057318 186846.49743752246 182824.94359423968 159943.26296098155 159642.02106244795 137937.06207262172 1.1773641036417428 1.219752998793543 1.2118791509773872 1.2333550181005337 1.5530901332941622 1.3545779113314063 1.3254229200414982 1.1595379846264517 1.157354076298935 1.0 17.07365061863062 -7.810436964598871 1.4752342603898194 1.013226727451276 1.2981597047979756 0.4386183236235218 0.10449807392424937 0.38834837798184524 1.75718802102976 0.10903319747298046 0.03319820439026004 1.547259063600444e-08 7.810436964598871 0.28493297734669953 SSS(ph)PATEQSWMENDFDELR ddPTM_KYSE-520_SHP099_60min_R1 9 SSSPATEQSWMENDFDELR 19 0 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.006)S(0.006)S(0.988)PATEQSWMENDFDELR;S(0.131)S(0.131)S(0.739)PATEQSWMENDFDELR;S(0.314)S(0.314)S(0.372)PATEQSWMENDFDELR;S(0.11)S(0.11)S(0.78)PATEQSWMENDFDELR;S(0.05)S(0.05)S(0.9)PATEQSWMENDFDELR;S(0.003)S(0.003)S(0.995)PATEQSWMENDFDELR;S(0.062)S(0.062)S(0.876)PATEQSWMENDFDELR;S(0.058)S(0.058)S(0.884)PATEQSWMENDFDELR;S(0.056)S(0.056)S(0.889)PATEQSWMENDFDELR 510.4 7.587299999999996e-184 5250570000.0 2497202.0 2145192.0 1939727.0 1838411.0 1725639.0 2138632.0 2053549.0 2429442.0 2431362.0 2271156.0 True False 2358677.2270112303 2042133.7563211615 2064764.9060929334 2013133.0287015794 1861436.9717571768 2125284.004402742 2261141.773626878 2421014.832738023 1989887.9504482483 2251035.324772631 1.0478188418697836 0.9071975609833801 0.9172512236348348 0.8943142768783156 0.826924816004473 0.9441362296779635 1.00448968914127 1.0755117017022204 0.8839878826198517 1.0 21.102157266042685 -6.616439154021248 4.836112483663034 0.9965454235422366 0.9139329947904145 0.2007359348902953 0.06710210969268068 0.3115608746498216 12.42524486065703 0.026384635887652913 0.020192125650174374 2.418582164917115e-07 6.616439154021248 -0.08261242875182218 SSS(ph)PATEQSWMENDFDELREEGFR ddPTM_KYSE-520_SHP099_60min_R1 11 SSSPATEQSWMENDFDELREEGFR 24 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.139)S(0.139)S(0.72)PAT(0.001)EQSWMENDFDELREEGFR;SSS(0.993)PAT(0.006)EQSWMENDFDELREEGFR;S(0.037)S(0.037)S(0.925)PATEQSWMENDFDELREEGFR;S(0.004)S(0.004)S(0.991)PATEQSWMENDFDELREEGFR;S(0.001)S(0.01)S(0.988)PATEQSWMENDFDELREEGFR;S(0.002)S(0.026)S(0.972)PATEQSWMENDFDELREEGFR;SSS(1)PATEQSWMENDFDELREEGFR;S(0.001)S(0.008)S(0.99)PATEQSWMENDFDELREEGFR;S(0.004)S(0.004)S(0.991)PATEQSWMENDFDELREEGFR;S(0.001)S(0.033)S(0.964)PAT(0.001)EQSWMENDFDELREEGFR;S(0.043)S(0.043)S(0.586)PAT(0.164)EQS(0.164)WMENDFDELREEGFR 395.95 2.4010999999999994e-100 23617132000.0 510582.0 419450.0 435898.9 404067.5 469997.0 490853.2 342265.0 475866.0 607379.8 492094.2 True False 482258.9986400168 399298.9923927138 463997.6405569 442469.9537126762 506983.08998287556 487789.6031060503 376864.48638449993 474215.33191395906 497094.93911876087 487734.62823149416 0.9887733425626724 0.8186808343720757 0.9513321665089405 0.9071940520546063 1.0394650300331874 1.0001127147251272 0.772683472877444 0.9722814507418603 1.0191914011133612 1.0 18.89573687905244 SSS(ph)PATEQSWMENDFDELREEGFRR ddPTM_KYSE-520_SHP099_60min_R1 8 SSSPATEQSWMENDFDELREEGFRR 25 2 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.17)S(0.17)S(0.624)PAT(0.036)EQSWMENDFDELREEGFRR;S(0.306)S(0.306)S(0.389)PATEQSWMENDFDELREEGFRR;S(0.307)S(0.307)S(0.385)PATEQSWMENDFDELREEGFRR;S(0.026)S(0.112)S(0.862)PATEQSWMENDFDELREEGFRR;S(0.303)S(0.303)S(0.394)PATEQSWMENDFDELREEGFRR;S(0.14)S(0.14)S(0.688)PAT(0.008)EQS(0.026)WMENDFDELREEGFRR;S(0.311)S(0.311)S(0.378)PATEQSWMENDFDELREEGFRR;S(0.304)S(0.304)S(0.392)PATEQSWMENDFDELREEGFRR 242.48 6.625399999999999e-29 20200730000.0 1135045.0 1126331.0 1258296.0 819463.0 868393.0 980648.0 723215.0 888985.0 1309737.0 997236.0 True False 1072081.791193889 1072220.3681027007 1339407.7735047827 897344.5171394652 936730.5886197118 974527.4120790939 796324.6300982177 885901.3185256583 1071921.7765829356 988401.2648778667 1.0846625042779183 1.0848027073652027 1.3551255154153294 0.9078747154884984 0.9477229763920428 0.985963339696366 0.8056693757839503 0.8962972327186631 1.0845006119203917 1.0 19.914737331351848 -5.2914454755905975 24.99263891011968 0.9383223813177007 1.1658575328510163 0.5282862655843554 0.09838960467326965 513.8111532567983 427961.70272197115 0.02784193756341136 0.04130196200718198 5.1115724931546745e-06 5.2914454755905975 0.2275351515333156 SSS(ph)PELVTHLK ddPTM_KYSE-520_SHP099_60min_R1 8 SSSPELVTHLK 11 0 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.084)S(0.084)S(0.832)PELVTHLK;S(0.006)S(0.245)S(0.749)PELVTHLK;S(0.012)S(0.039)S(0.949)PELVTHLK;SS(0.012)S(0.988)PELVTHLK;S(0.086)S(0.031)S(0.883)PELVTHLK;S(0.286)S(0.286)S(0.428)PELVTHLK;S(0.198)S(0.198)S(0.605)PELVTHLK;S(0.23)S(0.23)S(0.54)PELVTHLK 248.67 1.0223e-14 68706000000.0 39271400.0 35711400.0 33675400.0 34162400.0 33898200.0 35630300.0 33187700.0 34667400.0 42162000.0 33793000.0 True False 37092937.15640494 33995770.74009578 35846170.166545056 37409184.22469991 36565795.485625416 35407918.08131126 36542636.596738994 34547146.880832 34506443.61752757 33493620.310556196 1.107462758951571 1.0149924201947593 1.0702387449960853 1.1169047680674173 1.0917241894600735 1.0571541013782777 1.0910327476669293 1.0314545444925751 1.030239290276189 1.0 24.997382988951287 -7.596151038532753 1.567097745567653 1.0051040439978498 1.077353194505631 0.4763209097796378 0.027921267460570626 0.3594945755725041 1.601751214844754 0.02622184424288811 0.008343453164527104 2.5342471191048547e-08 7.596151038532753 0.07224915050778113 SSS(ph)PFLSK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPFLSK 8 0 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 SSS(1)PFLSK;SS(0.018)S(0.982)PFLSK 128.87 0.00082625 1160640000.0 3313200.0 2947400.0 2691400.0 2802300.0 2870200.0 3077500.0 2812500.0 3353300.0 3654800.0 3215900.0 True False 3129410.1912995484 2805802.4798624036 2864891.950392257 3068629.7494577854 3096068.4107959173 3058292.180959337 3096814.9473548452 3341668.1849661074 2991180.4500104315 3187409.62793234 0.9818035824060632 0.8802767160123428 0.8988151147208214 0.9627346678526517 0.9713431193982822 0.9594914171553278 0.9715773335866269 1.0483962135528324 0.9384361595063633 1.0 21.60395300739539 -5.45256745036947 3.5149979137239327 0.9818248249377255 0.916626643427752 0.35713237704644907 0.036485898520758245 0.25234169442693866 6.043100432578586 0.010674128310684634 0.015993223446370025 3.5272200103469657e-06 5.45256745036947 -0.06519818150997347 SSS(ph)PIPLT(ph)PSKEGSAVFAGFEGR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPIPLTPSKEGSAVFAGFEGR 23 1 Q8N5Y2;Q8N5Y2-3;Q8N5Y2-2;A0A3B3IT59;Q8N5Y2-6;Q8N5Y2-4;A0A3B3ITL5;A0A3B3ITF3;A0A3F2YNX2;A0A3B3IRN2 Q8N5Y2 MSL3 Male-specific lethal 3 homolog 2 S(0.21)S(0.236)S(0.554)PIPLT(0.878)PS(0.106)KEGS(0.016)AVFAGFEGR 95.823 0.0020776 375330000.0 458650.0 418920.0 402560.0 368430.0 363420.0 312150.0 323760.0 341210.0 594430.0 383650.0 True False 433207.7702038924 398794.45438826055 428509.6617187731 403445.47642748134 392019.0864230545 310201.7560638368 356488.8203931041 340026.422149013 486496.496360868 380251.1594751838 1.139267453652997 1.0487659128736646 1.1269121764419991 1.0609973602297753 1.030947774003142 0.8157812233681864 0.9375088320180901 0.8942153460315851 1.279408317997826 1.0 18.536593121509654 -5.826898458193979 3.2392373522182454 0.9721318789883451 1.0956900930300169 0.1560163111305266 0.11566588612387846 0.42435214928146836 8.99411832430862 0.03746149100840385 0.04472285106026469 1.4897093439243999e-06 5.826898458193979 0.12355821404167178 SSS(ph)PIRLPEMSGGQTNR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPIRLPEMSGGQTNR 17 1 Q9Y2I7 Q9Y2I7 PIKFYVE 1-phosphatidylinositol 3-phosphate 5-kinase 1 S(0.126)S(0.126)S(0.748)PIRLPEMSGGQTNR 122.19 5.9457e-05 457660000.0 154130.0 152750.0 134400.0 123570.0 120700.0 143220.0 127330.0 128940.0 159020.0 134830.0 True False 145580.10164946254 145411.6607175755 143063.63904760306 135314.05564732465 130198.40331094261 142326.11085523842 140201.75902104628 128492.73723482239 130145.97656798143 133635.51109615268 1.0893818600709773 1.0881214096824137 1.0705510674080239 1.01256061758887 0.9742799817427493 1.0650321137533028 1.0491355020161452 0.961516412672452 0.9738876702790438 1.0 17.02794390197026 -3.8773878065960754 0.36061172173882927 0.9879500345656925 1.224755664028492 0.5391569645502774 0.03203258888891147 7.151654176765003 0.6008326216902128 0.03198448341359035 0.7783417327762282 0.00013262096797019614 3.8773878065960754 0.23680562946279948 SSS(ph)PNSPLPMFR ddPTM_KYSE-520_SHP099_60min_R1 4 SSSPNSPLPMFR 12 0 A0A0U1RR27;Q7Z401;Q7Z401-2;H3BTW5 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 S(0.001)S(0.021)S(0.975)PNS(0.003)PLPMFR;SS(0.032)S(0.968)PNSPLPMFR;SS(0.001)S(0.999)PNSPLPMFR;SSS(1)PNSPLPMFR 236.83 3.0834e-15 740910000.0 1510540.0 1392420.0 1243540.0 1091210.0 1187220.0 1492200.0 1216820.0 1377190.0 1577670.0 1421660.0 True False 1426747.3350131637 1325526.053134969 1323700.5781343484 1194918.270315749 1280647.4596422303 1482886.626296515 1339828.0406187817 1372412.8493285629 1291204.897824219 1409065.1984347438 1.0125488420252393 0.9407130731831472 0.9394175511571626 0.8480219876575766 0.9088631676269019 1.0523903563467294 0.9508630559516522 0.9739881808543025 0.9163556798213102 1.0 20.426306937027295 SSS(ph)PPILTKPTLK ddPTM_KYSE-520_SHP099_60min_R1 3 SSSPPILTKPTLK 13 1 A0A3B3IS53;A0A3F2YNX6;Q92794;A0A3B3ITI3 A0A3B3IS53 KAT6A Histone acetyltransferase KAT6A 1 S(0.232)S(0.232)S(0.536)PPILTKPTLK;S(0.006)S(0.224)S(0.77)PPILTKPTLK;SSS(0.999)PPILTKPTLK 214.42 4.855600000000001e-11 1453310000.0 2755920.0 2498930.0 2257590.0 2030040.0 2196000.0 2623350.0 2174800.0 2524240.0 3077700.0 2350300.0 True False 2603043.623809684 2378877.6518295985 2403117.8636717135 2222974.3912462173 2368812.7064691777 2606976.6995677287 2394650.008002604 2515484.000602044 2518867.262503309 2329478.1705057295 1.1174363669802339 1.021206243505233 1.0316120984082873 0.9542799839861172 1.0168855568004351 1.1191247604615906 1.027977011470653 1.0798487113772492 1.0813010803859404 1.0 21.151575380366943 SSS(ph)PTLTPSQEGSPVFAGFEGR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPTLTPSQEGSPVFAGFEGR 22 0 P0C860 P0C860 MSL3P1 Putative male-specific lethal-3 protein-like 2 1 S(0.167)S(0.167)S(0.612)PT(0.052)LT(0.001)PSQEGSPVFAGFEGR 105.59 0.00072192 43646000.0 80944.0 62226.0 70201.0 59015.0 59470.0 62766.0 50302.0 65614.0 83870.0 75242.0 True False 76453.87496213648 59236.569556869814 74726.26878557137 64623.76785649328 64149.95066198636 62374.254112134426 55387.01706021103 65386.40034842275 68641.32219064656 74575.41441739025 1.0251887375943056 0.7943176718446292 1.002022843176396 0.866555933498422 0.860202402670487 0.8363916526569025 0.7426980794262315 0.8767822593980154 0.9204283037097021 1.0 16.186412469223615 -4.241173886504794 23.578714283163063 0.8713390853808102 1.025189059628244 0.2427573873224358 0.07740819998998981 3106.2921702824565 3614021.437673466 0.019076963138319837 0.6923007694473207 5.738866386056653e-05 4.241173886504794 0.15384997424743385 SSS(ph)PTQYGLTK ddPTM_KYSE-520_SHP099_60min_R1 10 SSSPTQYGLTK 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 SS(0.001)S(0.998)PT(0.001)QYGLTK;S(0.027)S(0.027)S(0.876)PT(0.031)QY(0.04)GLTK;SS(0.001)S(0.999)PTQYGLTK;SS(0.002)S(0.998)PTQYGLTK;SS(0.001)S(0.999)PTQYGLTK;S(0.001)S(0.031)S(0.964)PT(0.003)QYGLTK;S(0.011)S(0.073)S(0.917)PTQYGLTK;S(0.002)S(0.013)S(0.928)PT(0.057)QYGLTK;SS(0.001)S(0.99)PT(0.009)QYGLTK;SS(0.018)S(0.964)PT(0.018)QYGLTK 293.96 1.6470999999999998e-28 38721610000.0 40269520.0 38383170.0 33362070.0 28056850.0 30181400.0 35709190.0 30169020.0 37012020.0 43706600.0 35705930.0 True False 38035689.450302064 36539184.89888721 35512642.41339936 30723364.588400457 32556504.47132457 35486315.69955851 33218798.962861292 36883633.94129043 35770583.193724915 35389603.23899322 1.0747701575923099 1.0324835984210003 1.0034767039792798 0.8681466243325561 0.9199454498391475 1.0027327930158518 0.9386598300785673 1.0422166558977142 1.010765307318052 1.0 25.076822251678394 -9.932987657840485 13.90369230160035 0.9999999996867737 0.9849192063819869 0.000965877263858661 0.05911483986076739 0.0 0.0 0.06207477066054958 0.01505534330114342 1.1668427769458996e-10 9.932987657840485 -0.015080793304786733 SSS(ph)PTSYWK ddPTM_KYSE-520_SHP099_60min_R1 4 SSSPTSYWK 9 0 Q92614;Q92614-2;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 1 SSS(0.999)PT(0.001)SYWK;SS(0.003)S(0.996)PT(0.001)SYWK;SS(0.003)S(0.997)PTSYWK;S(0.002)S(0.051)S(0.947)PTSYWK 202.56 1.4632e-06 8121800000.0 17473900.0 15280600.0 12867100.0 14755300.0 15459200.0 14591200.0 14679600.0 16266900.0 17652300.0 14379200.0 True False 16504587.933643943 14546497.039351795 13696533.854087899 16157639.2756573 16675751.089184092 14500130.908469167 16163557.227089839 16210473.920623003 14447087.298270544 14251811.474848313 1.1580694820985629 1.0206770602476425 0.9610381022973555 1.1337253025113616 1.1700794048962522 1.0174237102461738 1.1341405445627306 1.1374325256288542 1.0137018247657046 1.0 23.76464196872997 -4.23496722950967 22.983769483798607 1.072452973628384 1.158069820193705 0.13141386790919662 0.06938032038240342 6622.235195310868 5749318.2354283035 0.01775768373660295 1.179939282148513 5.821471430989198e-05 4.23496722950967 0.08561684656532087 SSS(ph)PVGLAK ddPTM_KYSE-520_SHP099_60min_R1 11 SSSPVGLAK 9 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 S(0.003)S(0.005)S(0.993)PVGLAK;S(0.004)S(0.115)S(0.881)PVGLAK;S(0.001)S(0.083)S(0.916)PVGLAK;S(0.003)S(0.055)S(0.942)PVGLAK;S(0.003)S(0.264)S(0.733)PVGLAK;S(0.003)S(0.001)S(0.996)PVGLAK;SS(0.002)S(0.998)PVGLAK;SS(0.002)S(0.998)PVGLAK;SS(0.016)S(0.984)PVGLAK;SS(0.01)S(0.99)PVGLAK;SS(0.002)S(0.998)PVGLAK 190.57 4.8361e-06 34833110000.0 100423800.0 95906400.0 80768100.0 69928400.0 74199800.0 89779500.0 77494400.0 85518000.0 107515100.0 90118100.0 True False 94853091.6241179 91298912.58555874 85974540.95952915 76574374.11125998 80038902.12088867 89219152.83848539 85328290.22446063 85221358.01805115 87993068.07511117 89319723.74482097 1.0619501230781379 1.0221584747215762 0.9625482184108772 0.8573064369301747 0.8960943760815154 0.9988740347359011 0.955312966128696 0.9541157814316745 0.9851471140517637 1.0 26.412475453296317 -4.687289235282836 3.10916005897705 0.9453750108325861 1.0538000434326418 0.43434409714512934 0.042425221733013684 0.23447083005948974 4.40746997972566 0.012081560404485655 0.038915711209546774 2.0545218516039502e-05 4.687289235282836 0.10842503260005565 SSS(ph)PVNVK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPVNVK 8 0 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 1 S(0.003)S(0.081)S(0.916)PVNVK;S(0.001)S(0.313)S(0.686)PVNVK 101.38 0.0038185000000000003 519250000.0 1501510.0 1488620.0 1253480.0 1320780.0 1252460.0 1500440.0 1275000.0 1341340.0 1427860.0 1502590.0 True False 1418218.247114023 1417104.4607358254 1334281.326438912 1446306.5340930137 1351021.4764774079 1491075.1974000433 1403889.4428008622 1336687.2046111096 1168596.6174214429 1489278.2215973288 0.9522856283985068 0.951537758482701 0.8959248225679588 0.9711459639433754 0.9071652676343891 1.0012066085279803 0.9426643205022615 0.8975402884609718 0.7846731392929804 1.0 20.506181867517782 -7.3285407013180155 4.504948704540588 0.878164169600057 0.9459498042977997 0.1403634670783035 0.056121216771205164 0.33546786379769156 13.408396303842474 0.030390587330338083 0.014044383809833059 4.6930944939670526e-08 7.3285407013180155 0.06778563469774268 SSS(ph)PVQVEEEPVR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSPVQVEEEPVR 13 0 Q8IZ21-3;Q8IZ21;Q8IZ21-2;A0A0J9YVR0 Q8IZ21-3 PHACTR4 Phosphatase and actin regulator 4 1 S(0.034)S(0.112)S(0.854)PVQVEEEPVR;S(0.369)S(0.096)S(0.535)PVQVEEEPVR;SS(0.021)S(0.979)PVQVEEEPVR 277.41 1.6238e-18 1770080000.0 2600250.0 2707280.0 3463330.0 2656240.0 2082700.0 3056940.0 2269120.0 2510470.0 3050860.0 2993500.0 True False 2456008.9490301344 2577218.205089876 3686581.7933239243 2908688.25097232 2246596.641057995 3037860.5035456824 2498504.794077095 2501761.7655181023 2496900.7299219733 2966979.918907758 0.8277807791615494 0.8686335180989813 1.2425368199596967 0.9803531976863203 0.7571998134335337 1.023889809360091 0.8421037089448439 0.8432014485757229 0.8415630702486062 1.0 21.500563731737152 -5.559701914148529 24.97810676295083 0.8804827256760289 0.9923648900122239 0.11711957857956212 0.12625751683199188 332.55146107414026 225576.55700875513 0.03819560369931063 0.0493104155952999 2.7561197667980805e-06 5.559701914148529 0.11188216433619502 SSS(ph)PVTELAS(ph)RSPIR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPVTELASRSPIR 15 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.106)S(0.126)S(0.763)PVT(0.007)ELAS(0.972)RS(0.025)PIR 78.67399999999999 0.0078948 170520000.0 410110.0 392430.0 423810.0 325550.0 358840.0 344960.0 338970.0 345110.0 461490.0 358420.0 True False 387360.3807659831 373577.0737505612 451129.4707199755 356490.1741198231 387078.66647969047 342806.97668358544 373236.3956283991 343912.8939592791 377695.04921618546 355244.6776465402 1.0904044596310523 1.0516049845573232 1.269911976468338 1.0035060243028386 1.0896114448330294 0.9649883538147473 1.0506459888464823 0.9681014680857909 1.0631969259001335 1.0 18.438453509294135 SSS(ph)PVTELAS(ph)RSPIRQDR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPVTELASRSPIRQDR 18 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.117)S(0.133)S(0.749)PVT(0.007)ELAS(0.804)RS(0.191)PIRQDR;S(0.287)S(0.331)S(0.381)PVT(0.001)ELAS(0.57)RS(0.43)PIRQDR 69.071 0.009841500000000001 1522630000.0 608510.0 567580.0 615140.0 523740.0 583540.0 523560.0 555130.0 537900.0 733310.0 502200.0 True False 574754.7372653894 540312.6048450507 654792.9086587989 573516.0921318277 629461.2781115769 520292.26783527905 611247.9579467014 536034.1504468041 600159.389240765 497750.8987056877 1.1547035650963895 1.0855080447871357 1.315503217294978 1.1522150811242207 1.2646110328446991 1.0452864458672122 1.228019797726418 1.0769124713600018 1.205742452301688 1.0 18.925064395218488 -11.218961162014123 0.2993395370762088 0.7876978324941064 1.1835580311701808 0.2812885901494684 0.08159437395838441 49.85270272294826 2.035582770962511 7.190800944088215 0.08261434677072715 6.040026415689409e-12 11.218961162014123 0.39586019867607436 SSS(ph)PVTELASR ddPTM_KYSE-520_SHP099_60min_R1 9 SSSPVTELASR 11 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.204)S(0.012)S(0.784)PVTELASR;SSS(1)PVTELASR;SSS(1)PVTELASR;SSS(1)PVTELASR;S(0.007)S(0.065)S(0.928)PVTELASR;SS(0.001)S(0.999)PVTELASR;SS(0.002)S(0.998)PVTELASR;S(0.002)S(0.206)S(0.79)PVT(0.002)ELASR;SS(0.018)S(0.982)PVTELASR 303.31 3.6097e-29 28769210000.0 21561100.0 20347890.0 16378780.0 15646750.0 16481130.0 20589600.0 17879680.0 19467740.0 21205970.0 19525670.0 True False 20365062.802012756 19370346.821594458 17434582.36577456 17133812.41563306 17778101.16619778 20461092.66907566 19687132.543260965 19400210.95374467 17355500.407001127 19352687.754541386 1.0523118576763997 1.0009124865381518 0.9008868735394796 0.88534536561271 0.9186373175491293 1.0572739522588623 1.0172815679641758 1.002455638193828 0.8968005182085579 1.0 24.206030609954293 -6.233974938335893 24.777313479351918 0.9963232910238284 0.947857027306224 0.11607846399861299 0.058994518014221 1515.854193887986 1367543.1059951042 0.021164385920568952 0.02115999193502108 5.834787738867412e-07 6.233974938335893 -0.04846626371760443 SSS(ph)PVTELASRS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSPVTELASRSPIR 15 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.084)S(0.123)S(0.793)PVTELAS(0.02)RS(0.98)PIR;S(0.186)S(0.137)S(0.677)PVTELAS(0.009)RS(0.991)PIR;S(0.254)S(0.326)S(0.42)PVT(0.003)ELAS(0.08)RS(0.917)PIR 175.46 1.2416e-08 2515670000.0 1966030.0 1707690.0 1707290.0 1479860.0 1681440.0 1676370.0 1426140.0 1486530.0 2238670.0 1574660.0 True False 1856970.396716362 1625650.0091050537 1817344.6451605842 1620505.449463868 1813759.761915087 1665907.1530121234 1570308.1489851188 1481373.5743887092 1832183.9602782223 1560709.7374669432 1.1898243165511704 1.041609448624002 1.164434744996314 1.03831315366429 1.1621377879392538 1.0674035748094437 1.0061500298791972 0.9491666123599652 1.1739428006977686 1.0 20.573770817559062 -6.513740722405665 6.8052076917006845 1.0290110469957496 1.1132741924769987 0.24932412736171505 0.07097156448532072 0.20684494924473576 50.810031506467425 0.024767034283217765 0.020414388388848296 3.063791998352342e-07 6.513740722405665 0.08426314548124902 SSS(ph)PVTELASRS(ph)PIRQDR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPVTELASRSPIRQDR 18 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.263)S(0.328)S(0.41)PVTELAS(0.063)RS(0.937)PIRQDR;S(0.259)S(0.327)S(0.413)PVTELAS(0.034)RS(0.966)PIRQDR 143.47 3.4812000000000002e-06 496210000.0 535390.0 559000.0 545020.0 366801.0 451770.0 437563.0 346355.0 394040.0 613350.0 386353.0 True False 505690.8494264955 532144.8009238932 580152.8612628321 401661.6567572584 487321.7287803186 434832.0070112465 381367.9434990536 392673.1672096277 501981.10129525536 382930.21299808606 1.320582268678348 1.3896652258320317 1.5150354857628634 1.0489160769334906 1.2726123775006342 1.1355385191646392 0.9959202239833703 1.025443158781494 1.3108944769990356 1.0 18.546721967016953 -5.2663658141588945 24.995311620559846 1.1165620277838078 1.4065514204135197 0.5987677109203364 0.1108789221992295 282.0283782407525 1430932.1466768517 0.03130320784543572 0.04815251271604756 5.415445453923043e-06 5.2663658141588945 0.2899893926297119 SSS(ph)QENLLDEVMK ddPTM_KYSE-520_SHP099_60min_R1 9 SSSQENLLDEVMK 13 0 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 S(0.117)S(0.117)S(0.767)QENLLDEVMK;S(0.02)S(0.02)S(0.96)QENLLDEVMK;S(0.128)S(0.128)S(0.745)QENLLDEVMK;S(0.006)S(0.065)S(0.929)QENLLDEVMK;S(0.001)S(0.032)S(0.967)QENLLDEVMK;S(0.165)S(0.165)S(0.67)QENLLDEVMK;S(0.096)S(0.096)S(0.807)QENLLDEVMK;S(0.001)S(0.024)S(0.975)QENLLDEVMK;S(0.028)S(0.151)S(0.821)QENLLDEVMK 229.68 4.5309e-12 4753270000.0 8816940.0 9047590.0 6680390.0 5849830.0 6478280.0 8534710.0 6693100.0 7884450.0 9858600.0 8311000.0 True False 8327846.762065858 8612930.195690531 7111018.628401925 6405796.084384484 6988083.779628929 8481441.70910008 7369703.866361142 7857100.683194473 8068526.755081769 8237371.005860149 1.0109835718387994 1.0455921178690635 0.8632631240407983 0.777650548922385 0.8483390847222415 1.029629684406141 0.8946669830845618 0.9538359602359603 0.9795026531331098 1.0 22.973752537558614 -7.686698513154223 1.1597163146386937 1.0012833018550058 0.9195081985535652 0.09365599593107132 0.08093591656091885 1.25833989755085 3.337302969750921 0.08452152729405428 0.028183518989569962 2.057318288914403e-08 7.686698513154223 -0.08177510330144055 SSS(ph)QGPLSSIR ddPTM_KYSE-520_SHP099_60min_R1 4 SSSQGPLSSIR 11 0 A0A0U1RQE4 A0A0U1RQE4 1 S(0.001)S(0.009)S(0.99)QGPLSSIR;S(0.004)S(0.074)S(0.922)QGPLSSIR;S(0.002)S(0.152)S(0.846)QGPLSSIR;S(0.007)S(0.098)S(0.896)QGPLSSIR 186.16 1.0064e-06 2622780000.0 3440070.0 3380840.0 2992990.0 2541130.0 2841210.0 3177610.0 2939540.0 3290960.0 3998410.0 3025790.0 True False 3249242.4594904687 3218419.3716557017 3185922.9243533188 2782638.2311814073 3064797.0627264525 3157777.3573154197 3236697.390345769 3279544.427875839 3272399.5357136405 2998983.854628995 1.0834477999857166 1.073169956112969 1.0623341367562813 0.9278603573961715 1.021945169193183 1.0529491022238495 1.0792646933893486 1.093551878518383 1.091169440829974 1.0 21.516042324638736 -6.525973793176717 4.147736665527321 1.073416809000065 1.0318884599301936 0.08516840787893631 0.04729369350254803 0.46735478651435547 19.033181241137736 0.019510022485089325 0.01567670877798525 2.9786961687814954e-07 6.525973793176717 -0.04152834906987146 SSS(ph)QIPEGFGLTSGGSNYSLAR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSQIPEGFGLTSGGSNYSLAR 22 0 A2RRE0;Q9Y4E6-2;Q9Y4E6 A2RRE0 WDR7 WD repeat-containing protein 7 1 S(0.013)S(0.013)S(0.974)QIPEGFGLTSGGSNYSLAR;S(0.118)S(0.118)S(0.764)QIPEGFGLTSGGSNYSLAR 294.35 1.0872999999999999e-44 893200000.0 579820.0 664100.0 393070.0 362460.0 309340.0 491890.0 375350.0 486040.0 549720.0 543510.0 True False 547656.2287574866 632195.639165578 418407.9211342365 396908.0894224276 333683.29809616326 488819.9320526691 413294.0410629833 484354.0406825883 449904.7053134878 538694.9242443816 1.0166352124547577 1.1735689547332346 0.7767066335758227 0.736795673319484 0.6194290740055055 0.9074151436238771 0.7672135423267704 0.8991249385948524 0.8351753192116329 1.0 19.039108946144434 -4.767452526173537 24.999926818877437 0.8055556647382 1.095102109777217 0.5216159965204265 0.10573744623170063 93.33723191722382 388059.85357308015 0.0273632031940234 0.05941045453095104 1.708234441274312e-05 4.767452526173537 0.28954644503901694 SSS(ph)QPSSCCSDPSKPGGNVEGATQSLAEQMR ddPTM_KYSE-520_SHP099_60min_R1 4 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR 31 1 E7EMC7;Q13501;Q13501-2 E7EMC7 SQSTM1 Sequestosome-1 1 S(0.006)S(0.029)S(0.965)QPS(0.001)SCCSDPSKPGGNVEGATQSLAEQMR;SS(0.039)S(0.96)QPSSCCSDPSKPGGNVEGATQSLAEQMR;S(0.163)S(0.163)S(0.655)QPS(0.008)S(0.008)CCS(0.002)DPSKPGGNVEGATQSLAEQMR;S(0.132)S(0.132)S(0.637)QPS(0.028)S(0.028)CCS(0.036)DPS(0.007)KPGGNVEGATQSLAEQMR 292.86 5.6891e-53 6478860000.0 3850410.0 4159350.0 3299140.0 3344890.0 3147080.0 4157730.0 3582680.0 4367280.0 4573080.0 4192780.0 True False 3636820.0816979646 3959528.582688372 3511807.843210634 3662787.3399221506 3394737.291564212 4131780.064838362 3944852.25798729 4352130.925010817 3742723.949965442 4155635.2311334787 0.8751538283368524 0.9528094653313407 0.8450712461239683 0.8814025139841496 0.8168997283811827 0.9942595620240205 0.9492777971543244 1.0472841534322401 0.9006382278034032 1.0 21.98663759379478 -6.278286351742436 24.842291539176628 0.9794338304755524 0.8774051972522944 0.5423829951741234 0.04772611483097841 599.0730168510089 883381.1130591771 0.016273178047087496 0.014390459866113323 5.268823473864286e-07 6.278286351742436 -0.10202863322325806 SSS(ph)SERPEPQQK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSSERPEPQQK 12 1 P78362;C9J2M4 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 S(0.001)SS(0.5)S(0.5)ERPEPQQK;SS(0.002)S(0.499)S(0.499)ERPEPQQK 210.73 2.019e-10 814210000.0 1046030.0 868570.0 821370.0 782940.0 904970.0 820520.0 825860.0 840850.0 1060930.0 808380.0 True False 988004.630690891 826842.5934498505 874316.8244384662 857350.3822005057 976185.9904250505 815398.8303235602 909345.9884168786 837933.2876058643 868291.8558688764 801218.3821101225 1.2331277623571746 1.0319815569785642 1.0912341054081018 1.0700583028843542 1.2183769272169291 1.0176986056861195 1.134953975995891 1.045823843181241 1.0837143471198283 1.0 19.61183599528151 -8.187146421734985 0.013838581442169708 4.933169473981536e-05 2.1241249284530475 0.23953934444904068 0.06641184947937666 1498.440539152914 11.482682511426164 901.4077224102642 858.868970285834 6.499105370360929e-09 8.187146421734985 2.1240755967583076 SSS(ph)SESLSDKGSELKK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSESLSDKGSELKK 16 2 Q86X27;Q86X27-3;Q86X27-2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 S(0.002)S(0.164)S(0.816)S(0.017)ES(0.002)LSDKGSELKK 139.11 1.1071e-05 1147300000.0 1182900.0 1161600.0 1150500.0 1019800.0 1250600.0 1021100.0 953460.0 909150.0 1694400.0 870790.0 True False 1117282.1789473116 1105794.9924028523 1224663.0708650856 1116721.4853859486 1349015.1050593585 1014726.936142188 1049845.041672873 905996.3708472052 1386739.6723480565 863075.4780643686 1.2945358863086411 1.2812262895973294 1.4189524577985397 1.293886240274646 1.5630325960422529 1.1757105397293064 1.2164000349394415 1.049730172938172 1.6067420609123513 1.0 19.7191272065729 SSS(ph)SGSDDYAYTQALLLHQR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSGSDDYAYTQALLLHQR 20 0 F6SS63;Q8N5C8-2;Q8N5C8 F6SS63 TAB3 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 1 S(0.066)S(0.224)S(0.677)S(0.033)GSDDYAYTQALLLHQR 349.33 1.4527999999999996e-65 930960000.0 155440.0 122910.0 107120.0 139300.0 128290.0 129120.0 163140.0 164440.0 178130.0 172960.0 True False 146817.43333804232 117005.21910832863 114025.12659805996 152539.03011792793 138385.69312974982 128314.11418536791 179631.78329296716 163869.59602058434 145786.0822918785 171427.70896084388 0.8564393366044293 0.6825338786686697 0.6651499182323241 0.8898154857378958 0.8072539379346122 0.7485027651782733 1.047857341043957 0.9559107860329283 0.8504230919003751 1.0 17.387240794794277 -6.7490654777776715 24.988727881512595 0.9598737066503137 0.7724472079306224 0.5729562703411384 0.07972350286888641 170.88507633584797 345097.66180394334 0.03180370948552024 0.024455338046879774 1.782110061746827e-07 6.7490654777776715 -0.1874264987196913 SSS(ph)SPELQTLQDILGDPGDKADVGR ddPTM_KYSE-520_SHP099_60min_R1 8 SSSSPELQTLQDILGDPGDKADVGR 25 1 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 S(0.121)S(0.121)S(0.617)S(0.13)PELQT(0.01)LQDILGDPGDKADVGR;S(0.137)S(0.137)S(0.675)S(0.051)PELQTLQDILGDPGDKADVGR;S(0.078)S(0.078)S(0.426)S(0.399)PELQT(0.018)LQDILGDPGDKADVGR;S(0.05)S(0.05)S(0.884)S(0.015)PELQTLQDILGDPGDKADVGR;S(0.145)S(0.145)S(0.515)S(0.132)PELQT(0.063)LQDILGDPGDKADVGR;S(0.039)S(0.153)S(0.778)S(0.031)PELQTLQDILGDPGDKADVGR;S(0.087)S(0.087)S(0.413)S(0.413)PELQTLQDILGDPGDKADVGR;S(0.232)S(0.232)S(0.533)S(0.003)PELQTLQDILGDPGDKADVGR 181.02 2.6679000000000003e-11 1752836000.0 767090.0 736877.0 704335.0 573528.0 611473.0 719031.0 595572.0 642023.0 893335.0 661508.0 True False 724537.988543997 701476.3228450728 749737.5610758446 628035.9286825196 659592.4462945485 714543.2608179938 655778.229982585 639795.9720622945 731127.8831427343 655647.5537654364 1.1050723584384894 1.0698984825253113 1.1435069905622948 0.9578864819607104 1.0060167882980058 1.0898283028958389 1.0001993086322034 0.9758230140384037 1.11512332951417 1.0 19.3225609705666 -5.251699666254407 24.995643693533225 1.0211041278767794 1.102533196295708 0.3945971535591529 0.048445665297696824 724.2705168219966 1858735.5677806095 0.013030922182546305 0.022186213974611988 5.6014483238714075e-06 5.251699666254407 0.0814290684189285 SSS(ph)SPELQTLQDILGDPGDKADVGRLS(ph)PEVK ddPTM_KYSE-520_SHP099_60min_R1 4 SSSSPELQTLQDILGDPGDKADVGRLSPEVK 31 2 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 2 S(0.284)S(0.303)S(0.324)S(0.086)PELQT(0.003)LQDILGDPGDKADVGRLS(1)PEVK;S(0.296)S(0.326)S(0.358)S(0.018)PELQT(0.001)LQDILGDPGDKADVGRLS(1)PEVK;S(0.296)S(0.327)S(0.362)S(0.014)PELQTLQDILGDPGDKADVGRLS(1)PEVK;S(0.036)S(0.045)S(0.848)S(0.071)PELQTLQDILGDPGDKADVGRLS(1)PEVK 186.25 1.7755e-15 372776000.0 357401.0 341541.0 304284.0 288682.0 316176.0 297611.0 257561.0 280842.0 407322.0 253572.0 True False 337575.25406876975 325132.8576965071 323898.63351161376 316118.250484592 341057.252404644 295753.4993558052 283597.77943312394 279867.8246510156 333362.59255202726 251325.5493560309 1.3431792149016908 1.2936721257730939 1.2887612673742728 1.2578038774592508 1.3570337487713915 1.1767745066652062 1.128408075342057 1.1135669468071123 1.3264174430582132 1.0 17.939197815196245 -6.373778468502103 5.452763725811054 1.1520024901448545 1.3030137511516706 0.5036289616730811 0.07911954044922856 0.20629846700778234 8.59415455591819 0.027085908686704394 0.023758032670435254 4.228842704630095e-07 6.373778468502103 0.15101126100681617 SSS(ph)SQTLTQFDSNIAPADPDTAIVHPVPIR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSQTLTQFDSNIAPADPDTAIVHPVPIR 30 0 Q96D71;Q96D71-3;H0YE73 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 S(0.159)S(0.159)S(0.629)S(0.052)QTLTQFDSNIAPADPDTAIVHPVPIR 187.64 1.8866e-15 1517400000.0 0.0 25552.0 14483.0 9262.2 6462.9 9971.9 7501.9 12638.0 8651.3 0.0 True False 0.0 24324.44356566607 15416.597353619334 10142.47670321803 6971.493461129166 9909.661673211513 8260.265263488473 12594.161727731374 7080.442001525456 0.0 0.0 SSS(ph)SSASPS(ph)SPSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSSASPSSPSSR 14 0 Q9NYF8-3;E9PK91;H0YF63;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 S(0.015)S(0.022)S(0.938)S(0.025)S(0.001)AS(0.227)PS(0.761)S(0.012)PSSR 152.11 0.00036604 0.0 117920.0 108600.0 105350.0 116480.0 112270.0 114810.0 117230.0 124500.0 145050.0 120060.0 True False 111378.74253230786 103382.6929880766 112141.0295659598 127550.22417901097 121105.01027108131 114093.42820339274 129080.75245454538 124068.13855851833 118712.57641294002 118996.36180526651 0.9359844355121998 0.8687886874832261 0.9423904047543469 1.0718833941137005 1.0177202767700204 0.9587976176120641 1.0847453694910574 1.0426212757794362 0.9976151758925966 1.0 16.860557939686522 -5.069025770182723 5.087727745231094 1.0255702823840316 0.9025642411207198 0.6460350646545612 0.0377147731951952 0.12158357366138735 5.9848737920113715 0.010294107848852853 0.01873178466223401 8.530494942319644e-06 5.069025770182723 -0.12300604126331183 SSS(ph)SSGDPSSDPLGS(ph)PTLLAL ddPTM_KYSE-520_SHP099_60min_R1 3 SSSSSGDPSSDPLGSPTLLAL 21 0 P15407;E9PPX2;P15407-2 P15407 FOSL1 Fos-related antigen 1 2 S(0.079)S(0.079)S(0.639)S(0.203)S(0.001)GDPSS(0.001)DPLGS(0.841)PT(0.158)LLAL;S(0.157)S(0.224)S(0.324)S(0.287)S(0.008)GDPSSDPLGS(0.997)PT(0.003)LLAL;S(0.064)S(0.095)S(0.571)S(0.266)S(0.004)GDPSSDPLGS(0.996)PT(0.004)LLAL 153.95 2.3486e-08 113479000.0 421573.0 421861.0 403579.0 411185.0 439631.0 531169.0 561627.0 620399.0 774164.0 649692.0 True False 398187.50530505955 401594.1643337292 429594.34808923095 450263.8987727221 474227.4585417805 527853.7772438644 618401.7381113108 618246.9806712146 633595.3326862969 643936.234332727 0.6183648070645965 0.6236551741025684 0.6671380257618118 0.6992367796157704 0.7364509609141568 0.8197298879924779 0.9603462348288628 0.9601059044485474 0.9839411092355351 1.0 19.2965583072384 -6.3681515828257576 0.8805050366752647 1.0020988287828556 0.6277484369631057 0.985360833384836 0.01798785825231332 0.06581976476633712 0.10829319801549282 0.0125177581625655 0.010454059270906403 4.2839896919877954e-07 6.3681515828257576 -0.37435039181974994 SSS(ph)SSSQSSHSYKAEEYTEETEER ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSSSQSSHSYKAEEYTEETEER 24 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.204)S(0.204)S(0.404)S(0.06)S(0.025)S(0.025)QS(0.022)S(0.019)HS(0.019)Y(0.02)KAEEYTEETEER 56.528999999999996 0.036687 990040000.0 1300900.0 1174100.0 1064300.0 1105700.0 1224200.0 1225300.0 1170200.0 1286500.0 1506900.0 1310500.0 True False 1228736.4837201422 1117694.4736399713 1132906.4809402092 1210785.3955591728 1320537.5752548114 1217652.4481980442 1288495.2360514295 1282037.431771356 1233284.9458577004 1298889.9895535714 0.9459896477779915 0.8604997210149591 0.8722112650429997 0.9321693178768126 1.016666219522317 0.937456180270164 0.9919972025454483 0.9870254156104415 0.949491454839513 1.0 20.308847815162768 -5.52643203590761 5.417304367882326 0.9782409744552659 0.8910634082200966 0.6330217486632028 0.030063059929403495 0.1024503808676775 9.912350596766709 0.00854172626817624 0.011717047551099464 2.9755548762716186e-06 5.52643203590761 -0.08717756623516937 SSS(ph)STEQSLMMGLR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSTEQSLMMGLR 14 0 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 1 S(0.001)S(0.006)S(0.967)S(0.021)T(0.006)EQSLMMGLR 162.76 3.8136e-08 132880000.0 100620.0 97995.0 87195.0 91213.0 76441.0 128250.0 105400.0 149580.0 175750.0 130830.0 True False 95038.40801900283 93287.17310650623 92815.72921693273 99881.85609581147 82456.47181020518 127449.54417807795 116054.86060487141 149061.1418922346 143838.23029696115 129670.94798419972 0.7329198212585225 0.7194145994665913 0.715778905451067 0.770271657981416 0.6358900979134696 0.9828689167415322 0.8949950810802477 1.1495338332098686 1.1092556392391586 1.0 16.984495762862387 -6.621590233754199 1.477767249568669 1.083879639729944 0.717184266757395 0.8100719668281887 0.07493338031162906 0.15696258326973828 0.699027446253911 0.0386953011132496 0.026039627008210834 2.39006529774147e-07 6.621590233754199 -0.36669537297254895 SSS(ph)TEPPPPVR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSTEPPPPVR 11 0 Q8N684-2;Q8N684;Q8N684-3;F5H669;F5H6M0;F5H047;F5H5B7;F5H1W4;F5H2K8;F5H6P5;F5H6A8;F5GXA3;C9JM38;C9J286;C9J323;J3QT54 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 S(0.026)S(0.124)S(0.849)TEPPPPVR;S(0.092)S(0.208)S(0.699)TEPPPPVR;SSS(0.997)T(0.003)EPPPPVR 158.56 5.724e-05 1093090000.0 2819190.0 2659170.0 2390540.0 2075220.0 2240100.0 2637960.0 2364860.0 2627490.0 3062250.0 2732420.0 True False 2662803.9107840653 2531419.481704452 2544638.0333992355 2272448.284862357 2416383.125574504 2621495.5131384195 2603923.127609451 2618375.850450776 2506222.5930405078 2708212.884590591 0.9832328639801925 0.9347195326142667 0.9396004456953599 0.8390951456557635 0.8922426812616676 0.9679798541888701 0.9614913001948494 0.9668279275048957 0.9254156522556318 1.0 21.36890971867712 -6.275479632336844 24.357558560624582 0.9620914683141071 0.9155603960170797 0.26686218673590534 0.038412042761510924 881.6431842881627 1529502.1196387329 0.014441321979987154 0.012804916008467573 5.302984621305092e-07 6.275479632336844 -0.046531072297027354 SSS(ph)TGNLLDKDDLAIPPPDYGAASR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSTGNLLDKDDLAIPPPDYGAASR 25 1 B4DWA1;I3L4C2;Q9UQB8-3;Q9UQB8-5;Q9UQB8-4;Q9UQB8-2;Q9UQB8;Q9UQB8-6;I3L3C6 B4DWA1 BAIAP2 Brain-specific angiogenesis inhibitor 1-associated protein 2 1 S(0.2)S(0.2)S(0.532)T(0.069)GNLLDKDDLAIPPPDYGAASR 52.233999999999995 0.045170999999999996 1960600000.0 2339600.0 2288800.0 1668300.0 1528300.0 1583100.0 2118100.0 1568800.0 2015400.0 2429400.0 2027700.0 True False 2209817.724123027 2178842.6124411616 1775841.2873743796 1673549.1724998506 1707680.9633931469 2104880.152230698 1727389.614012545 2008409.0477978957 1988282.200190254 2009736.1555267293 1.0995561372800495 1.0841436108164713 0.8836191171118934 0.8327208364628501 0.8497040562747814 1.0473415360729441 0.8595106423608205 0.9993396607185555 0.9893249891148759 1.0 20.93857468162473 -4.749573131191635 23.854526507528483 0.9276178366315281 1.0918501238401124 0.4449775835438008 0.07091825433366543 114.82192749971102 230816.77440163746 0.018712693358249412 0.04855306173931355 1.7800281432672762e-05 4.749573131191635 0.1642322872085843 SSS(ph)TSDILEPFTVER ddPTM_KYSE-520_SHP099_60min_R1 8 SSSTSDILEPFTVER 15 0 Q6GYQ0-2;A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6;Q6GYQ0-3 Q6GYQ0-2;Q6GYQ0-3 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 1 SSS(1)TSDILEPFTVER;S(0.105)S(0.105)S(0.786)T(0.005)SDILEPFTVER;S(0.095)S(0.095)S(0.702)T(0.095)S(0.014)DILEPFTVER;SS(0.001)S(0.981)T(0.016)S(0.002)DILEPFTVER;S(0.12)S(0.12)S(0.733)T(0.027)S(0.001)DILEPFTVER;S(0.001)S(0.032)S(0.954)T(0.013)SDILEPFTVER;S(0.036)S(0.036)S(0.851)T(0.073)S(0.003)DILEPFTVER;S(0.004)S(0.17)S(0.813)T(0.013)SDILEPFTVER 221.73 2.3603999999999998e-14 2193968000.0 4412060.0 4733980.0 3692260.0 3151610.0 3347390.0 4437500.0 3503120.0 4018000.0 5025400.0 4432120.0 True False 4167314.2365764417 4506552.494951152 3930268.98742488 3451138.0668338994 3610810.5489562205 4409803.91649295 3857249.5567565155 4004062.495808248 4112914.04002474 4392854.864937178 0.9486573913103861 1.025882400741596 0.8946958431965146 0.7856253331700396 0.8219735593308427 1.0038583226800994 0.8780735251565562 0.91149437414102 0.9362736003078852 1.0 22.066727404494824 -8.974811139530116 13.495679422907608 0.9999999906864788 0.9100373502741075 0.12470643673564241 0.06992499632878596 0.0 0.0 0.07316501431059858 0.017745122476613275 1.0597144601595653e-09 8.974811139530116 -0.08996264041237134 SSS(ph)VEEKPLSHR ddPTM_KYSE-520_SHP099_60min_R1 7 SSSVEEKPLSHR 12 1 Q06190 Q06190 PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B subunit alpha 1 S(0.005)S(0.062)S(0.933)VEEKPLSHR;S(0.006)S(0.025)S(0.969)VEEKPLSHR;S(0.02)S(0.02)S(0.96)VEEKPLSHR;S(0.001)S(0.03)S(0.969)VEEKPLSHR;S(0.004)S(0.12)S(0.877)VEEKPLSHR;S(0.218)S(0.123)S(0.658)VEEKPLSHR;S(0.05)S(0.231)S(0.72)VEEKPLSHR 155.56 5.7429e-06 5700310000.0 5387670.0 4640530.0 4303750.0 4796630.0 4916740.0 5601000.0 5607100.0 6054650.0 6422160.0 5788220.0 True False 5088805.205046128 4417591.973222465 4581176.611243471 5252500.273040598 5303659.465576168 5566042.081414541 6173920.388022523 6033647.832315935 5256057.633478983 5736940.873967023 0.8870241679041887 0.7700257106132168 0.7985399731121239 0.9155576793331252 0.9244751832188144 0.9702108150830031 1.0761694296063635 1.0517186711292952 0.9161777590091295 1.0 22.45185021869385 -5.782211957179519 1.3383703754522118 1.0121988702821867 0.8142847289899038 0.6952528514926726 0.051738356048696865 0.23215811180147375 0.8714566678935561 0.020879294252592964 0.02889683414731546 1.6511557559055795e-06 5.782211957179519 -0.1979141412922829 SSS(ph)VGS(ph)SSSYPISPAVSR ddPTM_KYSE-520_SHP099_60min_R1 8 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 S(0.046)S(0.06)S(0.895)VGS(0.961)S(0.038)S(0.001)S(0.001)YPISPAVSR;S(0.111)S(0.134)S(0.752)VGS(0.837)S(0.06)S(0.05)S(0.042)Y(0.013)PISPAVSR;S(0.081)S(0.098)S(0.821)VGS(0.959)S(0.03)S(0.005)S(0.003)Y(0.004)PISPAVSR;SSS(1)VGS(0.881)S(0.117)S(0.001)SYPISPAVSR;S(0.001)S(0.001)S(0.999)VGS(0.985)S(0.015)SSYPISPAVSR;SS(0.006)S(0.994)VGS(0.999)S(0.001)SSYPISPAVSR;S(0.07)S(0.099)S(0.831)VGS(0.969)S(0.029)S(0.001)SYPISPAVSR;SS(0.001)S(0.999)VGS(0.962)S(0.038)SSYPISPAVSR 338.8 4.274e-59 18740200000.0 9270120.0 8422450.0 8624350.0 8794440.0 8750790.0 8370020.0 8421980.0 9003520.0 10182200.0 9383560.0 True False 8755887.964073919 8017822.859644817 9180289.400447901 9630260.9334552 9439427.38781576 8317779.600478733 9273355.929003946 8972288.890557358 8333369.152373931 9300428.9586992 0.9414499054781831 0.8620917266558236 0.9870823637506606 1.0354641679669507 1.014945378297476 0.8943436520418403 0.9970890558042561 0.9647177490845823 0.8960198706296525 1.0 23.148865827729388 -4.774918603649472 24.979576444406653 0.9741266758210606 0.9017708096065514 0.2690009804444906 0.04743037372458137 267.40022898035517 495545.7529503546 0.01274579604303303 0.02676749895776874 1.679118692455973e-05 4.774918603649472 -0.07235586621450918 SSS(ph)VGSS(ph)SSYPISPAVSR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 SSS(1)VGS(0.025)S(0.945)S(0.029)S(0.001)YPISPAVSR;SS(0.001)S(0.999)VGS(0.366)S(0.413)S(0.209)S(0.011)YPISPAVSR;S(0.08)S(0.1)S(0.806)VGS(0.236)S(0.692)S(0.005)S(0.002)Y(0.005)PIS(0.073)PAVSR 408.71 1.3217999999999997e-101 11470100000.0 3121530.0 2753500.0 2890850.0 2723240.0 2990220.0 2895950.0 2815930.0 3203440.0 3529330.0 3174160.0 True False 2948372.5082842163 2621217.7269122396 3077198.8165235403 2982055.9108280423 3225533.3019755324 2877875.301851892 3100591.6852284227 3192328.0143285166 2888492.639169127 3146039.411859113 0.9371696035244238 0.8331801938117691 0.9781183302802644 0.9478762089206738 1.0252679257026356 0.9147613634475251 0.9855539868765238 1.0147132938941952 0.9181361899920409 1.0 21.585105313484494 -4.782180943803277 24.903846137532923 0.9729091162944387 0.8851748992099603 0.4094006046893176 0.04221938557626042 177.09322376116606 212631.1728941547 0.010327180254495253 0.021535364467249782 1.6512736706967464e-05 4.782180943803277 -0.08773421708447837 SSS(ph)VGSSS(ph)SYPISPAVSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 SSS(1)VGS(0.241)S(0.016)S(0.721)S(0.022)YPISPAVSR 423.47 3.4635999999999997e-102 3400400000.0 1693900.0 1378300.0 1538800.0 1523500.0 1441600.0 1359500.0 1540400.0 1637200.0 1631200.0 1468500.0 True False 1599935.9902940672 1312084.399129523 1637993.5101670534 1668292.9819430243 1555045.7184180173 1351014.8562190821 1696118.6648552553 1631520.935325354 1335015.1992057064 1455490.2324757134 1.0992419973665224 0.9014724866258536 1.125389558527584 1.1462069237698316 1.0683999684236734 0.9282198025616949 1.1653246631344585 1.120942551809655 0.9172271784571957 1.0 20.473073727159203 -7.765596319451435 24.999795366752668 0.9586135767748758 1.066686909472434 0.21057305802605586 0.08567375371404864 182.62046449350953 1098206.2490953216 0.07440527013054517 0.021920041427380174 1.71555118657921e-08 7.765596319451435 0.10807333269755826 SSS(ph)VGSSSSYPIS(ph)PAVSR ddPTM_KYSE-520_SHP099_60min_R1 8 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 2 S(0.253)S(0.325)S(0.421)VGS(0.059)S(0.032)S(0.024)S(0.054)Y(0.106)PIS(0.726)PAVSR;S(0.02)S(0.031)S(0.949)VGS(0.001)S(0.002)SSYPIS(0.996)PAVSR;S(0.259)S(0.323)S(0.405)VGS(0.012)S(0.006)S(0.004)S(0.005)Y(0.006)PIS(0.979)PAVSR;S(0.109)S(0.148)S(0.743)VGS(0.056)S(0.103)S(0.011)S(0.008)Y(0.001)PIS(0.822)PAVSR;S(0.271)S(0.325)S(0.39)VGS(0.004)S(0.004)S(0.005)S(0.001)YPIS(0.999)PAVSR;SSS(1)VGSSSSYPIS(1)PAVSR;S(0.002)S(0.05)S(0.948)VGSSSSYPIS(1)PAVSR;S(0.001)S(0.001)S(0.998)VGSSSSYPIS(1)PAVSR 314.38 1.2944e-47 16302270000.0 8748090.0 8420190.0 7889910.0 8034230.0 7676560.0 8263170.0 8259210.0 8999810.0 11227710.0 8864980.0 True False 8262816.008814931 8015671.433437132 8398506.222902339 8797800.80362067 8280661.59834838 8211596.490962729 9094131.548921816 8968591.75968144 9189040.891536234 8786443.174050072 0.9404051042199164 0.9122771609233937 0.9558482376243588 1.0012926310846852 0.9424361410319627 0.934575724021627 1.035018535803028 1.0207306394661866 1.0458203290582013 1.0 23.066847837805582 -6.764224458451049 24.999925043246158 1.0271199430632103 0.9487435946363757 0.7189787670252559 0.023748960551599113 42.18632886776527 378672.37875062495 0.010312250758469014 0.00730310320650787 1.7209788835177368e-07 6.764224458451049 -0.07837634842683461 SSS(ph)VGSSSSYPISPAVSR ddPTM_KYSE-520_SHP099_60min_R1 13 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 SSS(1)VGSSSSYPISPAVSR;SS(0.001)S(0.999)VGSSSSYPISPAVSR;S(0.004)S(0.004)S(0.992)VGSSSSYPISPAVSR;SSS(1)VGSSSSYPISPAVSR;SSS(0.998)VGS(0.002)SSSYPISPAVSR;SSS(0.999)VGSSSSYPISPAVSR;SS(0.001)S(0.999)VGSSSSYPISPAVSR;SS(0.006)S(0.994)VGSSSSYPISPAVSR;SSS(0.925)VGS(0.071)S(0.004)SSYPISPAVSR;S(0.002)S(0.002)S(0.996)VGSSSSYPISPAVSR;SSS(0.998)VGS(0.002)SSSYPISPAVSR;SSS(1)VGSSSSYPISPAVSR;SSS(1)VGSSSSYPISPAVSR 506.38 2.2763999999999993e-189 592610070000.0 32457770.0 40418230.0 27890720.0 25330280.0 24876930.0 38283250.0 28465330.0 36799340.0 40766590.0 38870450.0 True False 30657272.795139674 38476477.561799936 29688600.437929858 27737662.19537362 26834602.86063038 38044310.03629945 31342883.35124916 36671691.67857053 33364404.898104027 38526088.0537525 0.795753587864045 0.9987122883620225 0.7706103042828442 0.7199708975557909 0.6965306942970726 0.9874947589596729 0.8135495954720042 0.9518664762278831 0.8660210933316985 1.0 25.19933236611932 -6.2715695997688705 24.993810275902895 0.9138882364194497 0.8018903757432587 0.3219315782858534 0.09176113181698245 1052.9274226367666 2597829.67153841 0.0338125495405921 0.030150039745666976 5.35094392998323e-07 6.2715695997688705 -0.111997860676191 SSS(ph)VKSLSQEMRCTIR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSVKSLSQEMRCTIR 16 2 A2A2Y4-2;A2A2Y4 A2A2Y4-2 FRMD3 FERM domain-containing protein 3 1 S(0.031)S(0.031)S(0.929)VKS(0.005)LS(0.001)QEMRCT(0.001)IR;S(0.117)S(0.117)S(0.761)VKS(0.003)LS(0.001)QEMRCT(0.001)IR;S(0.051)S(0.051)S(0.895)VKS(0.001)LSQEMRCTIR 77.468 0.011059999999999999 728740000.0 962250.0 853600.0 962450.0 307478.0 952540.0 1291450.0 581320.0 745050.0 917580.0 1219730.0 True False 908872.074302182 812591.7747202789 1024491.0669744468 336700.6166733686 1027499.4787887749 1283389.5815109464 640085.4987364691 742465.5954459771 750970.6023094475 1208924.1411355792 0.7518024029600822 0.6721610952007185 0.8474403249256907 0.2785126090352497 0.8499288283081298 1.0615964541045724 0.5294670500460164 0.6141539987352362 0.6211891852900199 1.0 20.205292288980605 SSS(ph)VLSLEGSEK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSVLSLEGSEK 12 0 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 SSS(1)VLSLEGSEK;SSS(1)VLSLEGSEK 302.63 2.488e-30 796470000.0 1499260.0 1506680.0 1103850.0 978980.0 1092980.0 1402660.0 1242110.0 1495040.0 1614580.0 1483320.0 True False 1416093.0590992852 1434296.8312272136 1175005.9372224463 1072021.9648589313 1178991.3077944822 1393905.4786496898 1367674.6006253962 1489854.0551849608 1321412.9722495996 1470178.9388054968 0.9632113627269373 0.9755933739552568 0.7992264793135486 0.7291778820678363 0.8019372857785589 0.9481196076596103 0.9302776447992215 1.0133828038615829 0.8988109796507031 1.0 20.48756032875072 -6.352686955128933 6.620199113585532 0.9582426461155412 0.8508293887944876 0.3222068846510502 0.07563191225693622 0.3502915501929012 21.481660881215454 0.0301888244612851 0.02656716648793839 4.439285178371819e-07 6.352686955128933 -0.10741325732105367 SSS(ph)VPHPFQVTLLR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSVPHPFQVTLLR 14 0 Q5VV41;Q5VV41-2 Q5VV41 ARHGEF16 Rho guanine nucleotide exchange factor 16 1 S(0.194)S(0.194)S(0.611)VPHPFQVTLLR 82.705 0.0067747 625920000.0 414800.0 535720.0 494990.0 745760.0 498990.0 511020.0 430060.0 476490.0 510520.0 523070.0 True False 391790.2171167005 509983.207067886 526897.8474120022 816636.8061790811 538257.6741352713 507830.53462675586 473534.66178112867 474837.167403602 417822.4371619033 518436.0067423015 0.7557156756502973 0.983695577536116 1.0163218614441392 1.5751930721606031 1.038233585505612 0.9795433342252069 0.9133907668888208 0.9159031418117315 0.8059286618369274 1.0 18.98380639509877 -6.417417673622115 2.858870141365951 0.9047183618461828 1.092810235399106 0.13380358857156638 0.1963628311467255 0.5668872055264712 8.966903250680058 0.08252896730138186 0.06966120550569874 3.8245674662273264e-07 6.417417673622115 0.18809187355292323 SSSASS(ph)PEMK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSASSPEMK 10 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSSAS(0.156)S(0.844)PEMK 106.29 0.0017132000000000002 0.0 2512800.0 2275900.0 1931600.0 1614900.0 1653100.0 2019800.0 1759100.0 1725300.0 2204100.0 1864300.0 True False 2373409.9748573867 2166562.347804455 2056114.026669276 1768379.610462611 1783189.5651476288 2007193.6789932332 1936926.9951615706 1719315.3369880463 1803891.000839443 1847783.7524034514 1.284463061096972 1.1725194276583295 1.1127460256076205 0.9570273621912967 0.9650423448242774 1.0862708779544328 1.0482433307697228 0.9304743234979183 0.9762457314028677 1.0 20.81736449621341 -4.744186501947693 1.605153435040272 0.9967210681419029 1.2830426314146608 0.8076580323331428 0.04666544628449759 0.2160701576698688 0.9569210678678677 0.014903426995954124 0.0734740121827109 1.8022436252716312e-05 4.744186501947693 0.28632156327275793 SSSCKREKT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSCKREKTPK 11 3 A0A075B739;A0A096LP49-2;A0A096LP49;A0A1W2PQX5 A0A075B739 MGC50722 1 S(0.001)S(0.001)S(0.001)CKREKT(0.996)PK 55.31399999999999 0.052478 591380000.0 422370.0 479000.0 470420.0 276570.0 379000.0 310490.0 247590.0 299600.0 597980.0 310630.0 True False 398940.2941262797 455988.1210063423 500744.0258986119 302855.12964619754 408825.14378498064 308552.11673958274 272618.8134455416 298560.75752716564 489401.90584908513 307878.0598664829 1.2957737043662274 1.4810672810010888 1.6264362134663604 0.9836853258641955 1.3278800833105007 1.002189363130949 0.8854765862944824 0.9697370369835451 1.5895965632020788 1.0 18.231999535552486 -5.265104000317574 24.980807451051586 1.1025407446949536 1.4690898905161294 0.37986722776898996 0.21033458084744494 322.53261912756693 2198626.6611895785 0.05908504318467681 0.09157981585610286 5.431202551385062e-06 5.265104000317574 0.3665491458211758 SSSISEEKGDS(ph)DDEKPR ddPTM_KYSE-520_SHP099_60min_R1 15 SSSISEEKGDSDDEKPR 17 2 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SSSISEEKGDS(1)DDEKPR;S(0.001)S(0.001)S(0.001)IS(0.001)EEKGDS(0.997)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSIS(0.004)EEKGDS(0.996)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR;SSSISEEKGDS(1)DDEKPR 292.53 9.077500000000001e-38 138016600000.0 37243410.0 32406600.0 30571680.0 31003510.0 30560410.0 29294420.0 31226320.0 32582080.0 38148230.0 28776620.0 True False 35177443.80440282 30849738.292701673 32542379.409217533 33950074.2688548 32965340.402052723 29111582.65856667 34382981.16511489 32469060.36919464 31221473.070619825 28521681.53467156 1.2333579898380247 1.0816241060401743 1.1409698747830954 1.190325129589024 1.1557993297828306 1.0206825506826451 1.2055032983703364 1.1383992325180605 1.0946575163412557 1.0 24.76555570455638 -13.999999998795927 0.19180650108488106 0.39028764647553016 1.163757879370971 0.3777950869400155 0.05751709257970248 154.1184388451494 1.5107668514438626 35.81351065069174 0.15230702873410593 1.0000000027724812e-14 13.999999998795927 0.7734702328954409 SSSISEEKGDS(ph)DDEKPRK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSISEEKGDSDDEKPRK 18 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 SSSISEEKGDS(1)DDEKPRK 201.87 3.6237e-13 551690000.0 299470.0 221250.0 205530.0 231470.0 260160.0 256260.0 254590.0 255290.0 293690.0 222610.0 True False 282857.80212135566 210620.81789697948 218778.79265962733 253468.83920600705 280633.1118920859 254660.58628517945 280326.4417589587 254404.4585751342 240363.2993224154 220637.8485879594 1.2820003636347628 0.9545996720187084 0.9915741748742128 1.1488003569113812 1.271917369064668 1.1542017288283002 1.2705274437409313 1.1530408776339813 1.0894019356184588 1.0 17.75132076893119 -3.926391110474135 19.112135516867607 1.1273191069446047 5.2292209452513365 0.1786330299940022 0.104484243241422 433.6564651285538 114625.8225570211 0.02713296159509851 1357.4097717589634 0.00011847013668549603 3.926391110474135 4.101901838306732 SSSLEMTPYNTPQLS(ph)PATTPANKK ddPTM_KYSE-520_SHP099_60min_R1 5 SSSLEMTPYNTPQLSPATTPANKK 24 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;Q14C86-4;H0Y7I9;C9IZ08;F8W9S7;H0Y4E7;B4DGD8;A0A0A0MQV8;B0QZ65 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 1 SSSLEMTPYNTPQLS(1)PATTPANKK;SSSLEMTPYNTPQLS(1)PATTPANKK;SSSLEMTPYNTPQLS(1)PATTPANKK;SSSLEMTPYNTPQLS(0.932)PAT(0.056)T(0.012)PANKK;SSSLEMTPYNTPQLS(1)PATTPANKK 222.71 1.9471000000000002e-21 3914620000.0 4372310.0 4845850.0 3187210.0 2629210.0 2580200.0 3902600.0 2565740.0 3106800.0 4288330.0 3389900.0 True False 4129769.2483161003 4613048.092230855 3392662.656316304 2879089.32789919 2783247.060670204 3878242.4258040283 2825110.0384093216 3096023.2359325727 3509677.3720020847 3359868.123302292 1.2291462333518914 1.372984868137282 1.0097606607790843 0.8569054564764994 0.828379852580241 1.1542841217208981 0.8408395611767714 0.9214716537414582 1.0445878359512963 1.0 21.679973176854517 -4.849533203820443 5.2222090957214045 0.9448593477820417 1.299442066861178 0.6538714578903613 0.10057911017737743 0.10876402425656569 4.837868582051407 0.026161275798808063 0.05735427163228487 1.4140566097736865e-05 4.849533203820443 0.3545827190791362 SSSLFS(ph)PWR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSLFSPWR 9 0 Q9HC44 Q9HC44 GPBP1L1 Vasculin-like protein 1 1 SS(0.001)S(0.002)LFS(0.996)PWR 62.166000000000004 0.033105 26838000.0 69909.0 66362.0 61466.0 52503.0 62072.0 53220.0 57669.0 61893.0 67547.0 57648.0 True False 66031.0084098636 63173.86990860729 65428.196709077216 57492.86933439746 66956.71325863147 52887.8342390434 63498.745315202395 61678.307628934825 55282.16752130204 57137.283569465355 1.1556553669476708 1.1056505658306783 1.1451051331401165 1.0062233578972966 1.1718567820471903 0.9256273825958905 1.111336440032243 1.079475672901892 0.9675323023379658 1.0 15.802144828599054 -1.0000000426804247 0.18473826561769596 0.9907160246258979 1.716080131695198 0.31704069496538434 0.06745932263125601 69.22103883707103 0.7930493781186143 0.13913466609226893 14.20504014097934 0.09999999017246951 1.0000000426804247 0.7253641070693 SSSLIQLTSQNSS(ph)PNQQR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSLIQLTSQNSSPNQQR 18 0 O95639;H7C419 O95639 CPSF4 Cleavage and polyadenylation specificity factor subunit 4 1 SSSLIQLTSQNS(0.006)S(0.994)PNQQR 244.1 1.0324999999999998e-23 536580000.0 396640.0 497840.0 411260.0 328690.0 383830.0 456190.0 409120.0 494370.0 603730.0 472700.0 True False 374637.5885177629 473923.0191269253 437770.4776392657 359928.5987757484 414035.2373060402 453342.74899491196 450477.8422264236 492655.14585682563 494107.8507947896 468512.2457550354 0.7996324363176722 1.01154884087004 0.934384280465866 0.7682373343213303 0.8837234054337209 0.9676219844890567 0.9615070818489531 1.0515309905355463 1.054631667094433 1.0 18.83772723130564 -6.736278179536398 1.6111782100702066 1.0363773358292474 0.8857371969697244 0.4934303311741881 0.06669880333777153 0.3514085946660838 1.8627711167855623 0.038621916482524825 0.023942435437656163 1.8353623583398627e-07 6.736278179536398 -0.150640138859523 SSSPALKPKPNPPS(ph)PENTASSAPVDWR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSPALKPKPNPPSPENTASSAPVDWR 27 2 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 S(0.001)S(0.001)S(0.001)PALKPKPNPPS(0.998)PENTASSAPVDWR;S(0.004)S(0.004)S(0.004)PALKPKPNPPS(0.989)PENTASSAPVDWR 159.95 3.5555000000000003e-10 2070410000.0 746140.0 670290.0 581900.0 649410.0 619420.0 724360.0 713660.0 737590.0 804790.0 714420.0 True False 704750.1268067862 638088.2622741978 619410.2050729191 711129.7311477647 668164.8299823032 719839.0005523011 785803.7174504031 735031.4724448001 658660.4231049296 708090.7946103502 0.995282147672316 0.9011390447821405 0.8747609908045332 1.004291732868928 0.9436146255085586 1.0165913835222442 1.109749940871378 1.0380469256760707 0.9301920433344693 1.0 19.433574835501773 -5.969007718326492 1.6294674347008413 1.0257661919362264 0.9298571789031668 0.30089372559563066 0.05536604650576608 0.43542686810302944 2.3606638838740786 0.02230449020601065 0.02534147712581873 1.073970325459833e-06 5.969007718326492 -0.09590901303305965 SSSPALKPKPNPPS(ph)PENTASSAPVDWRDPSQMEK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPALKPKPNPPSPENTASSAPVDWRDPSQMEK 34 3 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 SSSPALKPKPNPPS(1)PENTASSAPVDWRDPSQMEK 205.24 1.9796e-16 1290400000.0 431900.0 345840.0 353220.0 282410.0 319260.0 308460.0 290560.0 386080.0 478760.0 349950.0 True False 407941.6460286959 329225.3272835768 375989.12637198233 309250.1614903377 344383.94565908465 306534.78672257304 319932.6403923283 384740.77859174955 391829.2525574575 346849.7152569805 1.1761337204110214 0.9491872496987755 1.0840116333767564 0.8915969882264849 0.9928909568339447 0.883768310132421 0.9223955687992728 1.109243460980487 1.1296801909355805 1.0 18.403951174652345 -9.759667966987074 5.615990151984896 0.9999999993099302 1.00734760018336 0.0 0.09959551757712226 1.0504194353113237e-09 2.607794637352172e-10 0.09828326932665701 0.02383719167034189 1.7391299450430778e-10 9.759667966987074 0.007347600873429672 SSSPATEQS(ph)WMENDFDELREEGFR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPATEQSWMENDFDELREEGFR 24 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.008)S(0.008)S(0.076)PAT(0.006)EQS(0.902)WMENDFDELREEGFR 63.93600000000001 0.021485 674630000.0 194180.0 148660.0 151680.0 156290.0 148550.0 166360.0 138850.0 182230.0 189790.0 162790.0 True False 183408.4483117667 141518.15045679075 161457.53549658065 171143.75460969826 160240.03986611866 165321.68553189115 152886.31304541163 181597.8866628016 155328.920216559 161347.8072487035 1.1367272443254135 0.877099930082427 1.0006800727555474 1.0607132351411208 0.9931342892012328 1.0246292673631583 0.9475574267318724 1.1255057614937674 0.9626961956609246 1.0 17.299814445859948 SSSPATEQS(ph)WMENDFDELREEGFRR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSPATEQSWMENDFDELREEGFRR 25 2 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 S(0.106)S(0.106)S(0.096)PAT(0.048)EQS(0.644)WMENDFDELREEGFRR;S(0.02)S(0.02)S(0.123)PAT(0.123)EQS(0.712)WMENDFDELREEGFRR;SSSPATEQS(1)WMENDFDELREEGFRR 150.11 5.685100000000001e-07 1712480000.0 405033.0 341976.0 343103.0 348067.0 312081.0 292128.0 253089.0 356255.0 465021.0 312143.0 True False 382565.0120767321 325546.9596435592 365219.9683642102 381147.18302984047 336639.99920200685 290304.7207926204 278673.70603061025 355019.23455554195 380584.908625452 309377.65586357965 1.2365631609977177 1.0522639675927643 1.1804988545302517 1.2319803185718998 1.0881199492650127 0.9383506380972467 0.9007557616038427 1.1475270687036558 1.2301628815536416 1.0 18.239009479436888 -5.983303832948418 12.765430382596556 1.0402864631222968 1.166075410905078 0.27490339819832044 0.10075188346825732 1.3754328779864475 1045.0531108177038 0.03387127497915207 0.03820494129640887 1.0391928908455383e-06 5.983303832948418 0.12578894778278116 SSSPNS(ph)PLPMFR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSPNSPLPMFR 12 0 A0A0U1RR27;Q7Z401;Q7Z401-2;H3BTW5 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 SSS(0.005)PNS(0.995)PLPMFR;SSS(0.002)PNS(0.998)PLPMFR;SSSPNS(1)PLPMFR 195.36 3.5939999999999996e-08 0.0 651180.0 583350.0 475183.0 450790.0 491730.0 553040.0 451860.0 469920.0 639180.0 513188.0 True False 615057.7473048524 555324.9903737981 505814.0564996814 493632.9460650443 530426.3534390203 549588.2722202279 497538.4185286263 468289.9572001523 523121.0244165659 508641.5535742221 1.2092164766776212 1.0917806193212718 0.994441081239486 0.9704927617421103 1.0428293750514808 1.0805021106873265 0.9781710028062511 0.9206679122251823 1.0284669444338486 1.0 18.956289802541544 -4.427668356807386 2.312388190499185 1.0011936701711321 1.2255590934003735 0.7098985481190645 0.04136117683570209 0.2409802573882741 1.9609082341470545 0.012005097708723433 0.09411939465603168 3.7353529416029475e-05 4.427668356807386 0.22436542322924136 SSSPT(ph)SSLTQPIEMPTLSSS(ph)PTEERPTVGPGQQDNPLLK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSPTSSLTQPIEMPTLSSSPTEERPTVGPGQQDNPLLK 39 1 Q7LBC6;Q7LBC6-2 Q7LBC6 KDM3B Lysine-specific demethylase 3B 2 S(0.18)S(0.18)S(0.18)PT(0.218)S(0.218)S(0.023)LTQPIEMPTLSS(0.059)S(0.47)PT(0.47)EERPTVGPGQQDNPLLK 263.27 1.7553999999999998e-40 592910000.0 195940.0 208760.0 185460.0 195970.0 171290.0 196820.0 178520.0 204610.0 223500.0 198030.0 True False 185070.81760329372 198730.85624485137 197415.04834649165 214594.9298794711 184769.5484932174 195591.57337332808 196566.54378730227 203900.2556663332 182918.03397650528 196275.6082650087 0.942912974460961 1.0125091854334118 1.0058053065867691 1.0933346826760455 0.9413780455274097 0.9965149266496882 1.0014822805791577 1.0388466374845202 0.9319448075765574 1.0 17.582521370513483 -7.761296692518448 24.999999974974042 0.9659724193892653 1.004979216062822 0.10724673590808076 0.04394090797178668 8.29737825766123 1456046.7384303182 0.033692511463175076 0.010889356559779904 1.7326199371108434e-08 7.761296692518448 0.039006796673556665 SSSQPSS(ph)CCSDPSKPGGNVEGATQSLAEQMR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSQPSSCCSDPSKPGGNVEGATQSLAEQMR 31 1 E7EMC7;Q13501;Q13501-2 E7EMC7 SQSTM1 Sequestosome-1 1 SS(0.001)S(0.122)QPS(0.031)S(0.767)CCS(0.077)DPS(0.001)KPGGNVEGATQSLAEQMR 217.46 1.4124e-22 2155400000.0 1822900.0 1998700.0 1452800.0 1549600.0 1576500.0 2019900.0 1464600.0 2187300.0 2346500.0 1901700.0 True False 1721780.103138941 1902679.4518901345 1546449.812562189 1696873.5180957734 1700561.5809420107 2007293.05485614 1612656.061118547 2179712.7668196578 1920434.7504513175 1884852.4175002128 0.9134827146957498 1.009458053174033 0.8204620150649087 0.9002686376614321 0.9022253228703083 1.0649603312275844 0.8555874434229358 1.156436836423779 1.0188780472257324 1.0 20.846020135324242 -6.799863769392983 1.1433453373485214 1.051418786387817 0.9129138488959938 0.2760423304063604 0.08353356931797828 0.6217777606523142 1.6065661089255676 0.057039755459552775 0.03133352683496669 1.585390423805183e-07 6.799863769392983 -0.13850493749182324 SSSRPCS(ph)PVHHHEGHAK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSRPCSPVHHHEGHAK 17 1 Q9Y2K6 Q9Y2K6 USP20 Ubiquitin carboxyl-terminal hydrolase 20 1 S(0.048)S(0.048)S(0.048)RPCS(0.857)PVHHHEGHAK 90.884 0.0010815 61648000.0 32668.0 34090.0 24283.0 36033.0 23696.0 31719.0 27278.0 30745.0 36395.0 22512.0 True False 30855.840917956542 32452.2652298668 25848.321034173747 39457.565486283514 25560.740388202918 31521.02995543435 30035.52644762506 30638.35277093696 29786.58544328818 22312.56119407099 1.3828910383517836 1.4544392706692133 1.1584649924026784 1.7684014463013948 1.1455762593043353 1.4127033504253328 1.3461263449937901 1.373143697151107 1.33496935579064 1.0 14.445568505408797 -12.303459946322691 0.3070359663347201 1.3659804450568861e-09 1.3987023212395313 0.3313252808162419 0.16173859665343562 100.79278543627768 2.4153975216169132 64.43919054805816 0.14895417495926758 4.97210227818543e-13 12.303459946322691 1.3987023198735509 SSSS(ph)PELQTLQDILGDPGDKADVGR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSSPELQTLQDILGDPGDKADVGR 25 1 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 S(0.004)S(0.004)S(0.029)S(0.963)PELQTLQDILGDPGDKADVGR;S(0.027)S(0.027)S(0.134)S(0.811)PELQTLQDILGDPGDKADVGR;S(0.006)S(0.006)S(0.033)S(0.954)PELQTLQDILGDPGDKADVGR 174.89 1.0255999999999999e-10 1037240000.0 774580.0 818440.0 657420.0 554700.0 632700.0 734080.0 533360.0 649840.0 919090.0 721940.0 True False 731612.5033130512 779120.9138965152 699798.3451091906 607418.5212233639 682489.8904294398 729498.3344268501 587277.2338919758 647585.856713796 752206.4243734498 715544.1732608215 1.0224560979638817 1.088850895600151 0.9779946106193902 0.8488903186162277 0.9538053916633137 1.0195014671175893 0.8207421090660026 0.9050256866220695 1.0512368802411651 1.0 19.44868130718496 -4.9434131456974955 5.730943996781216 0.935602017521264 1.053096017705002 0.2853363832115289 0.06986887654204171 0.2261968200523793 15.408284024690357 0.01842819844123947 0.039062221054636415 1.1391655801625015e-05 4.9434131456974955 0.1174940001837379 SSSS(ph)PELQTLQDILGDPGDKADVGRLS(ph)PEVK ddPTM_KYSE-520_SHP099_60min_R1 5 SSSSPELQTLQDILGDPGDKADVGRLSPEVK 31 2 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 2 S(0.17)S(0.17)S(0.17)S(0.482)PELQT(0.008)LQDILGDPGDKADVGRLS(1)PEVK;S(0.215)S(0.249)S(0.249)S(0.288)PELQTLQDILGDPGDKADVGRLS(1)PEVK;S(0.011)S(0.014)S(0.436)S(0.539)PELQTLQDILGDPGDKADVGRLS(1)PEVK;S(0.229)S(0.249)S(0.249)S(0.272)PELQTLQDILGDPGDKADVGRLS(1)PEVK;S(0.018)S(0.019)S(0.1)S(0.861)PELQT(0.002)LQDILGDPGDKADVGRLS(1)PEVK 226.69 4.7251999999999993e-23 2916225000.0 881942.0 935640.0 857204.0 811732.0 850491.0 830456.0 684422.0 770508.0 1086752.0 791946.0 True False 833018.9191522109 890690.4499757271 912460.7414148928 888878.7652238748 917419.8030681593 825272.8160619874 753610.0550750226 767835.2875859197 889425.231588523 784929.974564665 1.061265267152292 1.134738739554084 1.1624740690033637 1.132430654998061 1.1687919085737237 1.051396739587754 0.960098453996469 0.9782213859418144 1.1331268525983007 1.0 19.582204427989467 -6.434285109020978 4.971452573156048 1.0146409127894314 1.1331560483444907 0.5324630530948163 0.050952172573973664 0.1742831430525512 7.191566375893358 0.018587259841339396 0.016117466859860374 3.6788738077934683e-07 6.434285109020978 0.11851513555505933 SSSS(ph)QT(ph)LTQFDSNIAPADPDTAIVHPVPIR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSQTLTQFDSNIAPADPDTAIVHPVPIR 30 0 Q96D71;Q96D71-3;H0YE73 Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 2 S(0.369)S(0.399)S(0.41)S(0.402)QT(0.403)LT(0.015)QFDSNIAPADPDTAIVHPVPIR 106.19 0.0012105 126650000.0 12968.0 11951.0 23578.0 16373.0 16935.0 12216.0 17727.0 17279.0 23645.0 21492.0 True False 12248.639188932899 11376.856021183286 25097.87560613384 17929.084997278052 18267.68815303074 12139.75541270488 19519.018158847783 17219.063181948924 19351.66404194391 21301.59760052299 0.5750103545582034 0.5340846369618758 1.1782156473333083 0.8416779498659699 0.8575736193881645 0.5698988235702486 0.9163171009468585 0.8083460923853978 0.9084606894211913 1.0 14.378674014879381 -4.701227365474663 24.999992925916665 0.8655474379181195 0.5545443732668585 0.44706021229088233 0.1457426993974391 69.16134305940626 28714.342696791173 0.037226114215796274 0.09849099909314497 1.989631437809621e-05 4.701227365474663 -0.31100306465126104 SSSS(ph)SGDPSSDPLGS(ph)PTLLAL ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSSGDPSSDPLGSPTLLAL 21 0 P15407;E9PPX2;P15407-2 P15407 FOSL1 Fos-related antigen 1 2 S(0.167)S(0.2)S(0.241)S(0.291)S(0.1)GDPS(0.001)SDPLGS(0.971)PT(0.029)LLAL 83.42299999999999 0.0043107 55371000.0 113160.0 112290.0 99508.0 125350.0 118570.0 130080.0 139940.0 150640.0 184100.0 182000.0 True False 106882.78922113251 106895.41984927363 105922.44489842933 137263.2263121483 127900.7844289847 129268.12246927385 154086.50088278664 150117.4649996403 150672.0807833316 180387.62159385715 0.5925173150837322 0.5925873344566222 0.5871935333618056 0.760934841866237 0.7090330439466263 0.7166130432182376 0.854196643435504 0.8321938261242219 0.835268403962717 1.0 17.460740817033045 -5.344953828933977 0.1715667429829736 1.073154501123887 0.2687020956999679 0.9028310547292977 0.040203774601575454 3.5434653624038215 0.16922580099531107 0.1675438443977052 0.6796300725470664 4.519039850029615e-06 5.344953828933977 -0.804452405423919 SSSS(ph)TEQSLMMGLR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSTEQSLMMGLR 14 0 Q8N1G0 Q8N1G0 ZNF687 Zinc finger protein 687 1 SSS(0.332)S(0.667)T(0.001)EQSLMMGLR 255.71 1.3598e-19 155880000.0 202390.0 240740.0 175490.0 202160.0 198150.0 265220.0 253940.0 374600.0 409080.0 329240.0 True False 191163.0232455375 229174.48904189302 186802.36619392762 221373.2256183797 213743.27768072282 263564.6636016361 279610.7334155699 373300.60003229766 334801.38406760036 326323.1897448441 0.5858088828900272 0.7022929912553478 0.5724458820716681 0.6783864358260104 0.6550048675604427 0.8076798458844446 0.8568521704945357 1.1439597667704393 1.025980974044123 1.0 18.3159419888084 -6.762225446603712 1.4004216665108187 1.0660902551058604 0.6362302682093458 0.8957873899071587 0.06087571075492765 0.11538872295319198 0.4579950851045812 0.03494589050643076 0.02048838238522694 1.728918627294906e-07 6.762225446603712 -0.4298599868965146 SSSSPELQTLQDILGDPGDKADVGRLS(ph)PEVK ddPTM_KYSE-520_SHP099_60min_R1 3 SSSSPELQTLQDILGDPGDKADVGRLSPEVK 31 2 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4;H3BQK4;A0A2R8Y670 P49815 TSC2 Tuberin 1 SSSSPELQTLQDILGDPGDKADVGRLS(1)PEVK;SSSSPELQTLQDILGDPGDKADVGRLS(1)PEVK;SSSSPELQTLQDILGDPGDKADVGRLS(1)PEVK 205.35 2.1081e-16 463833000.0 405462.0 496183.0 404628.0 369734.0 359544.0 411334.0 298405.0 407286.0 582498.0 391147.0 True False 382970.2145915422 472345.62389413256 430710.96830769087 404873.40819541947 387838.0672744785 408766.7119293998 328570.6895521502 405873.2199272672 476731.0467796257 387681.74188776093 0.987846919812946 1.218385012392157 1.1109911088678184 1.0443447922616789 1.0004032312328055 1.0543873176460894 0.8475268604402727 1.0469237420130373 1.229696927325625 1.0 18.56451326650748 -5.3141544982584366 3.9926190838218627 1.02446370090599 1.1176921911814728 0.09632306926832723 0.10153363351340883 0.4634075824489881 15.42433053150676 0.029657710125080734 0.0469803995766878 4.851158917210847e-06 5.3141544982584366 0.09322849027548274 SSSSPGGS(ph)LDLVSALEDYEEPFPVYQK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSPGGSLDLVSALEDYEEPFPVYQK 27 0 A0A1W2PR91;A0A1W2PQT1;C9J366;P0DPB3-2;P0DPB3;B3KU38-2;B3KU38;A0A1W2PPY3 A0A1W2PR91 IQCJ-SCHIP1 1 S(0.192)S(0.192)S(0.192)S(0.192)PGGS(0.232)LDLVSALEDYEEPFPVYQK 161.16 3.5838e-10 47584000.0 49436.0 68719.0 45825.0 49415.0 41025.0 55974.0 44807.0 66071.0 63458.0 64890.0 True False 46693.68653177722 65417.63609067805 48778.95282259238 54111.38674283849 44253.434099680315 55624.64550349896 49336.528834179066 65841.81512208736 51935.62684600029 64315.12508365611 0.7260140825512149 1.017142328582707 0.7584367247851033 0.8413477649690428 0.6880719588451223 0.8648765812263718 0.7671061631304603 1.0237376517023864 0.8075180881393991 1.0 15.972870437742761 -7.249591041748521 24.96943667741384 0.9367209075490807 0.8138023907637888 0.27099838555152134 0.1008686323298719 1010.5846084061772 2129732.8396554943 0.04570315631208619 0.026112107193879075 5.6287110958209094e-08 7.249591041748521 -0.12291851678529186 SSSSS(ph)GDPSSDPLGS(ph)PTLLAL ddPTM_KYSE-520_SHP099_60min_R1 2 SSSSSGDPSSDPLGSPTLLAL 21 0 P15407;E9PPX2;P15407-2 P15407 FOSL1 Fos-related antigen 1 2 S(0.131)S(0.158)S(0.192)S(0.234)S(0.285)GDPS(0.001)SDPLGS(0.984)PT(0.016)LLAL;S(0.144)S(0.167)S(0.195)S(0.227)S(0.266)GDPS(0.001)S(0.002)DPLGS(0.985)PT(0.013)LLAL 104.89 0.00068296 238658000.0 268810.0 255810.0 262397.0 262536.0 296060.0 346230.0 375040.0 409450.0 501100.0 472600.0 True False 253898.57344055022 243520.50362136177 279311.53047004406 287487.3425056736 319358.2376490275 344069.0501425028 412952.7032376753 408029.7135163482 410112.87170302845 468413.1316772361 0.5420398282418374 0.5198840236382646 0.5962931258351355 0.61374740173546 0.6817875419194778 0.7345418539196429 0.8815993304009755 0.8710893993414011 0.8755366661787357 1.0 18.837421995920835 -6.377398918855105 0.5039712044395809 0.9813748734958063 0.4944430503263626 0.968510802217216 0.02806643931840622 0.16126621763099847 0.08765556925552992 0.026248322210829955 0.03123778043840298 4.193735936653498e-07 6.377398918855105 -0.4869318231694437 SSSSS(ph)QESLNRPFSSK ddPTM_KYSE-520_SHP099_60min_R1 6 SSSSSQESLNRPFSSK 16 1 E3W994;J3KR49;O75122;A0A0U1RQI6;B3KR06;E7ENG2;O75122-2;E7ERI8;E7EW49;O75122-3 E3W994;E7ERI8 CLASP2 CLIP-associating protein 2 1 SS(0.001)S(0.005)S(0.278)S(0.716)QESLNRPFSSK;SSSS(0.002)S(0.719)QES(0.279)LNRPFSSK;SSSS(0.146)S(0.853)QESLNRPFSSK;SSSS(0.015)S(0.984)QES(0.001)LNRPFSSK;SS(0.001)S(0.01)S(0.045)S(0.935)QES(0.008)LNRPFSSK;SSSSS(1)QESLNRPFSSK 337.71 2.1974e-58 5858960000.0 4671200.0 4209130.0 3611980.0 3906440.0 3919400.0 3775490.0 3800500.0 3931760.0 4674330.0 3688270.0 True False 4412079.224193656 4006917.076767063 3844814.010172334 4277706.883085991 4227834.481664523 3751925.7664630963 4184691.6293056374 3918121.6422396814 3825589.5022702347 3655594.797230638 1.2069388072048102 1.0961053669850322 1.0517615390756772 1.1701808106102585 1.1565380508986922 1.026351653992241 1.1447361815034385 1.0718150833368965 1.0465026116046503 1.0 21.80167473369617 -13.999976376093764 0.05537293670314383 0.5394953420350521 1.3128407214478932 0.4165704447981603 0.050027476316880766 499.2569208369524 2.0270891965073314 31.634369414674573 6.02726372921232 1.0000543975338288e-14 13.999976376093764 0.7733453794128411 SSSSS(ph)QESLNRPLSAK ddPTM_KYSE-520_SHP099_60min_R1 3 SSSSSQESLNRPLSAK 16 1 Q7Z460;H0Y5T1;F8WA11;Q7Z460-2;Q7Z460-5;Q7Z460-3;Q7Z460-4 Q7Z460;Q7Z460-4 CLASP1 CLIP-associating protein 1 1 SSSS(0.002)S(0.998)QESLNRPLSAK;SSS(0.004)S(0.027)S(0.969)QESLNRPLSAK;SSSS(0.01)S(0.99)QESLNRPLSAK 237.73 6.9795e-18 1662050000.0 647330.0 601510.0 553050.0 448960.0 479970.0 560510.0 475220.0 495900.0 663930.0 537150.0 True False 611421.3144796379 572612.556715083 588700.4879112864 491629.02341525425 517740.908344268 557011.6491793728 523259.87530025654 494179.83864392975 543377.048313293 532391.268896376 1.1484435418091805 1.0755483610805336 1.105766608704228 0.9234355485099894 0.9724819669141502 1.0462448986701713 0.9828483408169926 0.9282267901732181 1.020634785088963 1.0 19.022127385988668 -5.243427284927134 24.477319196998426 0.981309126519026 1.1064824181365398 0.6948527773551785 0.03883046501663207 362.2531222922135 492278.49468543334 0.010664658315101029 0.01842048856157229 5.709166582547837e-06 5.243427284927134 0.12517329161751378 SSSSSAS(ph)PSS(ph)PSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSSASPSSPSSR 14 0 Q9NYF8-3;E9PK91;H0YF63;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 SSSSSAS(1)PS(0.388)S(0.612)PSSR 153.2 2.0778000000000003e-05 59577000.0 280270.0 258990.0 245500.0 273800.0 216580.0 230930.0 273810.0 228680.0 283400.0 254080.0 True False 264722.86439560656 246547.7316480844 261325.32281388823 299821.8696790285 233623.61382836732 229488.68021086612 301489.38692808204 227886.76245431296 231941.70393262448 251829.0488712486 1.0512006680013715 0.9790281651507791 1.0377092078344572 1.1905769847557062 0.9277071683172298 0.9112875628903148 1.1971986086570299 0.9049264311474389 0.9210283919676326 1.0 17.942085184202583 SSSSSASPSS(ph)PSSR ddPTM_KYSE-520_SHP099_60min_R1 9 SSSSSASPSSPSSR 14 0 Q9NYF8-3;E9PK91;H0YF63;Q9NYF8;Q9NYF8-2;Q9NYF8-4 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 SSSSSASPS(0.002)S(0.998)PSSR;SSSSSASPS(0.002)S(0.998)PSSR;SSSSSASPS(0.003)S(0.995)PS(0.002)SR;SSSSSASPSS(1)PSSR;SSSSSASPSS(0.985)PS(0.007)S(0.007)R;SSSSSASPS(0.003)S(0.994)PS(0.002)S(0.002)R;SSSSSASPSS(1)PSSR;SSSS(0.001)S(0.003)AS(0.008)PS(0.036)S(0.943)PS(0.004)S(0.004)R;SSSSSAS(0.006)PS(0.145)S(0.839)PS(0.005)S(0.005)R 288.06 1.9031e-36 10707640000.0 3595795.0 4118496.0 3038259.0 2586560.0 2528728.0 3698245.0 2907365.0 3498500.0 4197002.0 3805715.0 True False 3396329.0833103764 3920637.2701714733 3234110.036526282 2832385.8847223776 2727724.5071058227 3675162.881160676 3201269.827348027 3486364.5200560363 3434932.2346105645 3771999.325901471 0.900405538248257 1.0394056126281197 0.8573994205986135 0.750897770652561 0.7231508469196036 0.9743275551308186 0.8486931069593854 0.9242749584062635 0.910639673507802 1.0 21.846897987511444 -9.641258354074376 9.651477617874006 0.9999999994264396 0.8795803741308718 0.13662351320391974 0.08966188485884667 0.0 0.0 0.09363793316596022 0.022710534478309872 2.284239545577934e-10 9.641258354074376 -0.12041962529556782 SSSSSGDPSS(ph)DPLGS(ph)PTLLAL ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSSGDPSSDPLGSPTLLAL 21 0 P15407;E9PPX2;P15407-2 P15407 FOSL1 Fos-related antigen 1 2 SSSSSGDPS(0.465)S(0.536)DPLGS(0.963)PT(0.035)LLAL 61.167 0.012422 0.0 58996.0 54761.0 49460.0 47022.0 39044.0 47916.0 48046.0 44265.0 55610.0 47948.0 True False 55723.37427438973 52130.19936206324 52648.270738798055 51490.9567423202 42116.54067002852 47616.9384704623 52902.9585637728 44111.45504652869 45512.62581401993 47523.21802297954 1.1725505256703168 1.0969416956750704 1.10784313287329 1.0834905312477385 0.8862308240503272 1.0019720980897682 1.1132023622262264 0.9282085027406789 0.957692422933409 1.0 15.536344910734496 -5.564446932564426 10.776703524224725 0.985140341650579 1.1183840209923754 0.5637091450313365 0.058469781737622684 0.42987701673168566 109.36875843760669 0.017973851828585345 0.023227640621457452 2.726170835623834e-06 5.564446932564426 0.13324367934179648 SSSSSGDPSSDPLGS(ph)PTLLAL ddPTM_KYSE-520_SHP099_60min_R1 5 SSSSSGDPSSDPLGSPTLLAL 21 0 P15407;E9PPX2;P15407-2 P15407 FOSL1 Fos-related antigen 1 1 SSSSSGDPS(0.003)S(0.003)DPLGS(0.964)PT(0.03)LLAL;SSSSSGDPSSDPLGS(0.967)PT(0.033)LLAL;SSSSSGDPS(0.005)S(0.008)DPLGS(0.952)PT(0.034)LLAL;SSSSSGDPSSDPLGS(0.708)PT(0.291)LLAL;SSSSSGDPSSDPLGS(0.956)PT(0.044)LLAL 108.18 0.00029941 141175000.0 258057.0 437755.0 356073.0 243736.0 322779.0 500098.0 348181.0 458353.0 584958.0 569450.0 True False 243742.06378612423 416724.59271634906 379026.0353169433 266900.59615809936 348179.87093871325 496976.70288006566 383378.5333990961 456763.08042339486 478744.37279117946 564405.116025396 0.43185658114260744 0.7383430463050552 0.6715496095890963 0.4728883360194238 0.6168970851834846 0.8805318888316095 0.6792612655584886 0.8092823177081944 0.8482282658288977 1.0 19.10637153967712 -7.2500867528017405 0.34375773413604593 1.02222757944178 0.5360732413779478 0.6175537669132753 0.10483802891088052 0.9553351056708208 0.3483015195357815 0.15694520890137867 0.15528548652597876 5.622290055193837e-08 7.2500867528017405 -0.48615433806383235 SSSSSGVPYS(ph)PAIPNK ddPTM_KYSE-520_SHP099_60min_R1 4 SSSSSGVPYSPAIPNK 16 0 A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5 A0A0A0MRE1 EXOC7 Exocyst complex component 7 1 SSSSSGVPYS(1)PAIPNK;SSSSSGVPYS(1)PAIPNK;SSSSSGVPYS(1)PAIPNK;SSSSSGVPYS(1)PAIPNK 322.75 1.9172999999999998e-47 7399200000.0 9276400.0 11550600.0 7753400.0 7279800.0 6089620.0 10207400.0 6891700.0 9384100.0 11394800.0 9742700.0 True False 8761819.59995506 10995691.838195927 8253196.5698786285 7971670.003248317 6568838.448801844 10143691.830357218 7588380.292510364 9351548.747365396 9325791.55953236 9656387.257705906 0.9073600059859891 1.1386962375003384 0.8546878195354566 0.8255333791513834 0.6802583899646151 1.0504644811404429 0.7858405105340769 0.9684314120586615 0.9657640389360185 1.0 23.203052104113134 -9.677280127018113 14.18910484654889 1.0000058781418868 0.9069123839501742 0.04560850481993095 0.12528353721090074 0.0 0.0 0.12336015469392302 0.02991923222326935 2.1024219059297905e-10 9.677280127018113 -0.09309349419171264 SSSSSGVPYS(ph)PAIPNKR ddPTM_KYSE-520_SHP099_60min_R1 2 SSSSSGVPYSPAIPNKR 17 1 A0A0A0MRE1;B4DJ07;A0A0A0MSB8;Q9UPT5-4;Q9UPT5-2;Q9UPT5-5;Q9UPT5-1;Q9UPT5-6;Q9UPT5 A0A0A0MRE1 EXOC7 Exocyst complex component 7 1 SSSSSGVPYS(1)PAIPNKR;SSSSSGVPYS(1)PAIPNKR 180.05 4.2787e-09 1875800000.0 1573630.0 1404420.0 1156550.0 1197010.0 973650.0 1239580.0 1116800.0 1204840.0 1732170.0 1196380.0 True False 1486337.6069463666 1336949.5551226025 1231103.0635454287 1310773.4705058201 1050270.7156893043 1231843.3214211466 1229697.0429176504 1200660.6912517694 1417651.5924522725 1185781.0039695567 1.2534672101936677 1.1274843758223394 1.0382212730884965 1.1054094020041094 0.8857206450207804 1.038845551832413 1.037035539278399 1.0125484277724142 1.1955425054934248 1.0 20.177406159595602 -4.295981591136681 1.5228611890515054 1.0336617437790812 1.3309412013324529 0.4468432569245734 0.07407747512127841 0.9451612568206303 2.160872072945408 0.0208777432013189 0.4146498286363868 5.058461033402897e-05 4.295981591136681 0.2972794575533717 SSSSTPTS(ph)PKPLLQSPK ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSTPTSPKPLLQSPK 17 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.033)S(0.033)S(0.033)S(0.033)T(0.03)PT(0.155)S(0.682)PKPLLQSPK 55.763000000000005 0.056041999999999995 0.0 601930.0 526220.0 461520.0 277650.0 472700.0 485320.0 462760.0 643680.0 674810.0 498130.0 True False 568539.7429822935 500939.6013276764 491270.3176581089 304037.7725214836 509898.8007049093 482290.93785968615 509540.29690237535 641447.224316042 552281.5145757739 493716.95573927526 1.1515499647586158 1.014629122019085 0.9950444519826084 0.6158139172397423 1.0327755503989202 0.9768571491281272 1.032049418151756 1.299220569314984 1.118619703365881 1.0 18.91332466689462 -7.02855492197095 5.681248787202266 1.1597385329254946 0.9585037317703285 0.2195471580826377 0.14555187283044613 0.2583008973673046 25.205112497154854 0.06981826033396617 0.04163952232079058 9.363647973624368e-08 7.02855492197095 -0.201234801155166 SSSSTPTS(ph)PKPLLQSPKPSLAAR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSSTPTSPKPLLQSPKPSLAAR 23 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 S(0.002)S(0.002)S(0.007)S(0.007)T(0.009)PT(0.047)S(0.925)PKPLLQSPKPSLAAR 106.11 0.00050537 1455500000.0 977680.0 1049400.0 726460.0 729760.0 820600.0 1150200.0 1064900.0 1396300.0 1575000.0 1420000.0 True False 923446.1414432381 998985.2488184861 773288.7739770967 799116.1709896557 885176.5514246849 1143021.1751549742 1172550.4844224637 1391456.5611988686 1289019.7025189982 1407419.9047432833 0.6561269585082903 0.7097990055787249 0.5494371447859737 0.5677880270816664 0.6289356491559235 0.8121394129092298 0.8331205779247094 0.9886577250395457 0.9158742875347627 1.0 20.424621391226395 -6.6250349658478385 1.434989233204865 0.9620537341801019 0.6167809720995252 0.8841406403722111 0.0542086480796865 0.13806139170507528 0.5797253273216012 0.03180288884201917 0.021216958432192165 2.371182789686894e-07 6.6250349658478385 -0.34527276208057667 SSSSVGS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 3 SSSSVGSPTR 10 0 Q9HCD6;Q9HCD6-2 Q9HCD6 TANC2 Protein TANC2 1 SSSSVGS(0.999)PTR;S(0.002)S(0.007)S(0.005)S(0.028)VGS(0.957)PT(0.002)R;SSSS(0.001)VGS(0.973)PT(0.026)R 127.03 0.00041084 1008460000.0 1871710.0 1760520.0 1553150.0 1502560.0 1539940.0 1782880.0 1625690.0 1656400.0 2038290.0 1755810.0 True False 1767882.5151386175 1675941.9766056046 1653268.534127863 1645362.8506388627 1661124.5169399555 1771752.384594245 1790030.6104054418 1650654.335006668 1668187.917109488 1740254.8893995082 1.0158756202366668 0.963043969486507 0.9500151639845926 0.9454723331974726 0.9545294353479119 1.0180993573910344 1.0286025462759132 0.9485129707500735 0.9585882661620404 1.0 20.73086719766335 -6.22937946751454 24.959064761738485 0.9899078216896954 0.9636300562416062 0.15402027126947626 0.029010649123006865 1333.6218862656533 1038242.5479073687 0.010357232425577909 0.01035686319220322 5.896856135227543e-07 6.22937946751454 -0.02627776544808913 SSSTSSSTVTSSAGSEQQNQS(ph)SSGSESTDKGSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSTSSSTVTSSAGSEQQNQSSSGSESTDKGSSR 34 1 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 SSSTSSSTVTSS(0.001)AGS(0.01)EQQNQS(0.306)S(0.306)S(0.306)GS(0.065)ES(0.003)T(0.003)DKGS(0.001)S(0.001)R 74.83800000000001 0.008666799999999999 66918000.0 47188.0 51537.0 40287.0 43092.0 37430.0 34685.0 34264.0 36395.0 47698.0 41877.0 True False 44570.38757305414 49061.0851613859 42883.964481479125 47187.4507239178 40375.528052432295 34468.51804925253 37727.73950441475 36268.75423965686 39037.24556873085 41506.00235981302 1.073829929143167 1.1820238609365055 1.0331991047878 1.1368825721844433 0.9727635945861345 0.8304465881933663 0.9089706875973085 0.8738195002555348 0.9405204873820255 1.0 15.341032365371824 -5.914938436242347 4.22457253763054 0.9023147116768654 1.1059264287150303 0.7355074693348859 0.05525486397801777 0.1013420701583577 3.3988505089609315 0.016671385850007978 0.018991740842743424 1.2163584142744809e-06 5.914938436242347 0.20361171703816494 SSSTSSSTVTSSAGSEQQNQSS(ph)SGSESTDKGSSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSSTSSSTVTSSAGSEQQNQSSSGSESTDKGSSR 34 1 Q8N488 Q8N488 RYBP RING1 and YY1-binding protein 1 SSSTSSSTVTSSAGSEQQNQS(0.014)S(0.577)S(0.399)GS(0.007)ES(0.001)T(0.001)DKGSSR 196.77 9.146800000000001e-16 56743000.0 35190.0 32190.0 26566.0 31905.0 25734.0 24857.0 25307.0 29845.0 34320.0 25638.0 True False 33237.940550474166 30643.544081824923 28278.48686710287 34937.241607411954 27759.119393569126 24701.85824276403 27865.27853251879 29741.47466087535 28088.35313679491 25410.86726606218 1.3080207063560374 1.2059227951952396 1.112850127113551 1.3748937114819708 1.0924113334236012 0.9720981965757194 1.0965890396718034 1.1704234392895738 1.1053677484793556 1.0 14.633157994574532 -5.916690999224737 11.366270674751403 1.0758455936438536 1.2372909225333963 0.5283103373437094 0.08195798514319434 0.436287834275845 57.01389999266007 0.025899406462935842 0.02937544446305364 1.2114597813183451e-06 5.916690999224737 0.16144532888954277 SSSVGSSSSYPIS(ph)PAVSR ddPTM_KYSE-520_SHP099_60min_R1 8 SSSVGSSSSYPISPAVSR 18 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(0.975)PAVS(0.025)R;SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(1)PAVSR;SSSVGSSSSYPIS(1)PAVSR 481.98 1.1943999999999996e-156 26166200000.0 8025590.0 10291210.0 6677210.0 6177050.0 5186550.0 8194730.0 6477930.0 8636620.0 10113690.0 8321080.0 True False 7580394.524082985 9796804.824178867 7107633.640513738 6764114.974802193 5594701.977567261 8143583.650389243 7132782.382904322 8606661.58102227 8277298.84137736 8247361.70490228 0.9191296314283335 1.1878713671980203 0.8618069504928975 0.8201550043308472 0.6783626301053023 0.9874168178592978 0.8648562580521422 1.0435654320710124 1.003629904634507 1.0 22.975501250623086 -8.951911058244036 10.469747537560382 1.0000007719647765 0.9277769543709101 0.02499706267584134 0.1313554260174568 96756755.95567115 82729589.15519594 0.13524022671402341 0.03381005634542796 1.1170920002861678e-09 8.951911058244036 -0.07222381759386642 SSSVLS(ph)LEGS(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 4 SSSVLSLEGSEK 12 0 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 2 S(0.001)S(0.001)S(0.005)VLS(0.994)LEGS(1)EK;SSSVLS(1)LEGS(1)EK;SSSVLS(1)LEGS(1)EK;SSSVLS(1)LEGS(1)EK 191.63 8.1392e-08 405450000.0 3369440.0 3173060.0 2841670.0 3085780.0 3242020.0 3073890.0 2900300.0 3118110.0 3769420.0 3090590.0 True False 3182530.4463878837 3020621.4347398393 3024848.595032762 3379051.603426417 3497148.5294295135 3054704.7123083966 3193490.6282002702 3107294.0041823466 3084988.3473454975 3063209.777042638 1.0389528233552594 0.9860968247679349 0.9874768021774494 1.1031081281964001 1.14166145447793 0.9972234795024543 1.04253082898012 1.0143915142443394 1.0071097221176557 1.0 21.546612739374304 -9.923777384032237 13.409645232641228 0.9999999897465925 1.0361218754648605 0.04583844293856365 0.048343249214156496 0.0 0.0 0.05068346893372166 0.012292546908436362 1.1918527859261487e-10 9.923777384032237 0.03612188571826791 SSSVLS(ph)LEGSEK ddPTM_KYSE-520_SHP099_60min_R1 2 SSSVLSLEGSEK 12 0 A1L390-3;A1L390;A1L390-2;G3V311;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 SSSVLS(0.996)LEGS(0.004)EK;SSSVLS(1)LEGSEK 239.31 2.7009e-15 3246700000.0 3273300.0 3351600.0 2717800.0 2326700.0 2590600.0 3071100.0 2674300.0 3101400.0 3728200.0 3149600.0 True False 3091723.523838222 3190584.105145838 2892993.73663375 2547828.8684521373 2794465.4815022997 3051932.1257333006 2944644.342652825 3090641.9672721983 3051252.8602738557 3121696.9943517246 0.9903983408486681 1.0220671996413346 0.9267375218889657 0.816167896199432 0.8951751199935468 0.9776516206586822 0.9432832039691067 0.9900518765480071 0.9774340257221223 1.0 21.57389907910603 -7.028901094149847 1.541037497093176 0.9898325990906273 0.932228833370098 0.1584475076276397 0.05333203140162831 0.9026662108184642 4.1185211734507226 0.04220332488046563 0.01982737381213479 9.356187268870547e-08 7.028901094149847 -0.057603765720529276 SSSVS(ph)PSSWK ddPTM_KYSE-520_SHP099_60min_R1 4 SSSVSPSSWK 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 SSSVS(0.942)PS(0.057)SWK;SSSVS(0.998)PS(0.001)SWK;SSSVS(0.985)PS(0.012)S(0.003)WK;SSSVS(0.811)PS(0.182)S(0.007)WK 217.22 3.8496e-09 4147470000.0 6473700.0 5727800.0 4849750.0 4629580.0 5117700.0 5537100.0 5216300.0 5461400.0 6573500.0 5497000.0 True False 6114590.955998988 5452627.890396916 5162372.644874358 5069573.891266017 5520433.87427018 5502540.905017042 5743614.510182076 5442455.678100347 5379918.10444992 5448300.856601287 1.122293191388359 1.0007941987620574 0.9475197462011496 0.9304871417156791 1.013239543771063 1.0099554062529488 1.0542028902869747 0.9989271557032579 0.9874487929445908 1.0 22.377374940872112 -5.913930782872649 22.458276492743156 1.0127409304824297 0.9934588657911324 0.0017482526459663417 0.05044615777109883 51.42797533179989 13402.46594915467 0.016627819629621177 0.018854176716663833 1.2191838949289636e-06 5.913930782872649 -0.01928206469129734 SST(ph)PEEVK ddPTM_KYSE-520_SHP099_60min_R1 2 SSTPEEVK 8 0 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;E9PS23 E9PP50 CFL1 Cofilin-1 1 SS(0.023)T(0.977)PEEVK;SS(0.001)T(0.999)PEEVK 125.71 0.0049978 1518150000.0 5057400.0 4781400.0 4225500.0 3513000.0 3828600.0 4883400.0 4007200.0 4822900.0 5353200.0 4762400.0 True False 4776855.940323049 4551694.366972284 4497882.491039042 3846874.4637780376 4129889.038245854 4852920.889194747 4412286.882503233 4806170.485573318 4381193.823190283 4720208.841091138 1.0120009730795758 0.9642993605172987 0.9528990437633471 0.8149797166366016 0.8749377786621779 1.0281157153362162 0.9347651832886434 1.0182114070322168 0.9281779621804853 1.0 22.170419260975102 -6.260627992986882 24.999923305159065 0.9800492108434434 0.9216404867658565 0.20042832290128765 0.05781488224015881 136.87160750676304 4217246.266979072 0.021037815627583927 0.01987710821775224 5.487468079986906e-07 6.260627992986882 -0.058408724077586904 SST(ph)PLPTISSSAENTR ddPTM_KYSE-520_SHP099_60min_R1 2 SSTPLPTISSSAENTR 16 0 P42166;G5E972;P42167;H0YJH7;P42167-2;P42167-3 P42166;G5E972 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 SS(0.002)T(0.998)PLPTISSSAENTR;S(0.001)S(0.09)T(0.909)PLPTISSSAENTR 215.93 3.2608000000000004e-17 1384400000.0 707730.0 863460.0 670140.0 524520.0 520710.0 767460.0 646840.0 791180.0 875720.0 612130.0 True False 668470.806075223 821978.0855201165 713338.2966619105 574370.2230973112 561686.9145653755 762669.997465167 712228.8997500471 788435.5812427999 716711.3231047215 606707.0044299342 1.1018016953724186 1.3548188491617175 1.1757541802771303 0.9467011570716793 0.9257959945478793 1.2570647642048844 1.1739256256308792 1.2995326829688063 1.1813137443141077 1.0 19.210640441812252 SST(ph)PPGESYFGVSSLQLK ddPTM_KYSE-520_SHP099_60min_R1 5 SSTPPGESYFGVSSLQLK 18 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 S(0.121)S(0.121)T(0.757)PPGESYFGVSSLQLK;S(0.018)S(0.018)T(0.964)PPGESYFGVSSLQLK;S(0.019)S(0.019)T(0.962)PPGESYFGVSSLQLK;S(0.098)S(0.098)T(0.803)PPGESYFGVSSLQLK;S(0.033)S(0.033)T(0.933)PPGESYFGVSSLQLK 257.34 4.8858e-29 5357430000.0 2333590.0 3005290.0 2251450.0 2058020.0 2089880.0 2792260.0 2204080.0 2711430.0 3146970.0 2882220.0 True False 2204141.110803668 2860911.3573677465 2396582.0694473665 2253613.6020337236 2254341.666209383 2774832.469603746 2426889.9161478663 2702024.6821825225 2575559.576657909 2856685.7731332267 0.771572824541411 1.0014791911221952 0.8389379370972201 0.7888909670180313 0.7891458302523803 0.9713467598364158 0.8495473807348582 0.945859956875456 0.9015900876745793 1.0 21.445910922198333 -6.265314103588727 24.97626413474079 0.92502749202075 0.8444104639947443 0.30594563716646306 0.07112619538491095 517.0803858049567 3333060.679428401 0.02490726443505791 0.022771947454568345 5.428575676096335e-07 6.265314103588727 -0.08061702802600568 SST(ph)PPLHVHVDENTPVHVHIK ddPTM_KYSE-520_SHP099_60min_R1 3 SSTPPLHVHVDENTPVHVHIK 21 0 Q5BJF6-9;Q5BJF6-3;Q5BJF6-4 Q5BJF6-9 1 S(0.323)S(0.323)T(0.355)PPLHVHVDENTPVHVHIK;S(0.233)S(0.322)T(0.446)PPLHVHVDENTPVHVHIK;S(0.244)S(0.324)T(0.432)PPLHVHVDENTPVHVHIK 248.79 8.2221e-27 6489300000.0 3989200.0 4526590.0 4684490.0 5259040.0 3981180.0 3712320.0 3751370.0 3878610.0 5346810.0 2774870.0 True False 3767911.1237269575 4309125.821849886 4986459.720849011 5758857.580411974 4294476.216184409 3689150.0338648194 4130595.089443045 3865156.0071843783 4375964.086111494 2750286.8106161957 1.370006615012914 1.5667914361573207 1.8130689866966296 2.0939116452082738 1.5614648623582068 1.3413692054314414 1.5018779399656847 1.4053647031519592 1.5910937249235724 1.0 21.391150645662417 -5.99921225644661 24.999980808880387 1.4071773850921385 1.7229108105081545 0.3341145749148874 0.22530104010747873 35.51518464992078 1127048.2484023592 0.07214158502716533 0.08110846034137541 1.0018154925778715e-06 5.99921225644661 0.315733425416016 SST(ph)PPRQS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 7 SSTPPRQSPSR 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.013)S(0.063)T(0.924)PPRQS(0.992)PS(0.008)R;SST(1)PPRQS(0.848)PS(0.152)R;S(0.035)S(0.046)T(0.918)PPRQS(0.652)PS(0.348)R;S(0.295)S(0.332)T(0.375)PPRQS(0.996)PS(0.001)R;S(0.291)S(0.331)T(0.378)PPRQS(0.978)PS(0.021)R;S(0.278)S(0.33)T(0.392)PPRQS(0.989)PS(0.01)R;S(0.294)S(0.332)T(0.375)PPRQS(0.994)PS(0.006)R 115.83 0.0025119 8834300000.0 1332962.0 1194462.0 1153060.0 1052038.0 1149190.0 1214415.0 1159084.0 1230300.0 1370924.0 1111450.0 True False 1259019.9406661324 1137078.252595985 1227388.0925612294 1152023.3752132417 1239624.7150033314 1206835.385520627 1276255.5222897232 1226032.3764541782 1121998.7597816857 1101603.4176950161 1.142897634886149 1.0322029092603908 1.1141832649079864 1.0457696088341155 1.1252912755092115 1.0955261813237627 1.1585435391623486 1.1129525896166117 1.0185142327620447 1.0 20.071173509839248 -10.411651395604332 4.568961062491432 0.9998056870952695 1.0947680316879056 0.2827467115614425 0.044892681504847626 8.619016541379491e-05 1.1098713353248521e-05 0.04216033486899264 0.010204501198214665 3.8756861804918695e-11 10.411651395604332 0.09496234459263608 SST(ph)PPRQSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 SSTPPRQSPSR 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 S(0.108)S(0.355)T(0.537)PPRQS(0.04)PS(0.96)R;S(0.014)S(0.077)T(0.909)PPRQS(0.196)PS(0.804)R 122.78 0.00034939 1256330000.0 574500.0 476520.0 464460.0 477950.0 499750.0 455000.0 472870.0 489040.0 576400.0 493130.0 True False 542631.339762643 453627.2639288976 494399.8347622751 523374.2242990933 539077.4818114623 452160.17622632004 520672.31436646567 487343.6343827944 471740.2898615558 488761.2518493344 1.1102175913280348 0.9281162576053242 1.011536476943714 1.0708177506273118 1.1029464381060192 0.9251146127387835 1.0652896734272383 0.9970995706775524 0.9651753040500324 1.0 18.89877038974761 -7.509942522545788 22.636111582990427 0.9821042121421368 1.026537046915746 0.09589801876477577 0.0609166656505708 446.47875093471055 781285.1073124926 0.03529637242479385 0.015620099409540764 3.090704450071979e-08 7.509942522545788 0.04443283477360915 SST(ph)PRES(ph)PCGK ddPTM_KYSE-520_SHP099_60min_R1 1 SSTPRESPCGK 11 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;A0A1W2PNU4;A0A286YES2;F8VYC4;P0DJD0;P0DJD1;J3KQ37;H7BZ48;Q99666;O14715 P49792;Q99666 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2;RGPD8;RGPD6;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 2 S(0.009)S(0.012)T(0.979)PRES(1)PCGK 99.161 0.0050326 196000000.0 573990.0 498460.0 471790.0 499850.0 505640.0 491770.0 473950.0 497660.0 582960.0 479440.0 True False 542149.6304793023 474513.23339628614 502202.33829069004 547355.5937146174 545430.9913019465 488700.6810171805 521861.49130625074 495933.73361471767 477109.15922569804 475192.5345986759 1.1409051931701222 0.9985704716447966 1.0568397054360823 1.1518606751195846 1.1478105222393498 1.0284266806293851 1.098210626871462 1.043647990037467 1.0040333643470236 1.0 18.858152645630057 -7.552083513649552 2.0323648173755653 0.9977701452045222 1.0873381291972193 0.34510313695023365 0.04817668826339117 0.4209235679774913 3.1586901148093154 0.04400677906388648 0.014101874460088286 2.8048942125479176e-08 7.552083513649552 0.08956798399269705 SST(ph)PVPSK ddPTM_KYSE-520_SHP099_60min_R1 1 SSTPVPSK 8 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;H7C3G1 Q9H8V3-2 ECT2 Protein ECT2 1 S(0.02)S(0.356)T(0.624)PVPS(0.001)K 87.258 0.023099 590190000.0 3078900.0 3119100.0 2334300.0 2133900.0 2344700.0 3078700.0 2428800.0 2755300.0 3349800.0 3107600.0 True False 2908107.2793650166 2969253.754135448 2484772.7130120555 2336705.21441957 2529214.55048191 3059484.6913142214 2674326.8068037145 2745742.5073918533 2741560.7615861204 3080069.081676213 0.9441694982316394 0.9640218045108073 0.8067262931842458 0.7586535082349208 0.8211551375677194 0.9933169062718589 0.8682684497934415 0.8914548455184599 0.8900971662928183 1.0 21.554531278255396 -6.234547961407653 24.9930059638425 0.918070987452572 0.8563100207631819 0.19103494163334156 0.06992702396805549 1592.2639833354465 1479858.016177072 0.025270679115745157 0.025263480149531493 5.827094195986033e-07 6.234547961407653 -0.06176096668939013 SSTFPQTDVLSS(ph)SLEAEHR ddPTM_KYSE-520_SHP099_60min_R1 1 SSTFPQTDVLSSSLEAEHR 19 0 D4PHA4;Q86WP2-4;Q86WP2-3;Q86WP2;Q86WP2-2 D4PHA4 GPBP1 Vasculin 1 SSTFPQTDVLS(0.008)S(0.496)S(0.496)LEAEHR 110.57 8.7897e-05 195000000.0 375830.0 431290.0 379560.0 370400.0 345150.0 333660.0 288390.0 374840.0 441820.0 351440.0 True False 354981.960701469 410570.18102051143 404027.0449174728 405602.7046351797 372311.34136513463 331577.5041751076 317543.27561516955 373539.7675283135 361596.62537583685 348326.5150161825 1.019106916638193 1.1786934480179816 1.159908957544339 1.1644324711150291 1.0688573086313509 0.9519157740825536 0.9116253340645548 1.0723839599490714 1.0380967563122143 1.0 18.410080771152387 -6.008433350132124 4.498943322316492 0.9947768362870125 1.1351531142663367 0.5488674747432849 0.05798711990564709 0.1562394630572673 8.045220947223315 0.019918700569016647 0.02134500646992109 9.807688184135964e-07 6.008433350132124 0.14037627797932417 SSTFPQTDVLSSS(ph)LEAEHR ddPTM_KYSE-520_SHP099_60min_R1 4 SSTFPQTDVLSSSLEAEHR 19 0 D4PHA4;Q86WP2-4;Q86WP2-3;Q86WP2;Q86WP2-2 D4PHA4 GPBP1 Vasculin 1 SSTFPQTDVLSS(0.062)S(0.938)LEAEHR;SSTFPQTDVLSS(0.045)S(0.955)LEAEHR;SSTFPQTDVLSS(0.06)S(0.939)LEAEHR;SSTFPQTDVLSS(0.317)S(0.682)LEAEHR 227.66 2.3929e-19 3745510000.0 2322300.0 2578190.0 2372710.0 2368430.0 2181150.0 2402920.0 2073670.0 2328950.0 2979030.0 2468950.0 True False 2193477.3896097215 2454329.8824579134 2525658.6830702275 2593524.8751055533 2352794.095954122 2387922.484962081 2283296.800668915 2320871.4160310146 2438113.247235029 2447077.023814035 0.8963663048868601 1.00296388653618 1.0321124584520491 1.0598460325794172 0.9614712054657917 0.9758264499742818 0.9330710796794409 0.948425976561083 0.9963369454693195 1.0 21.22262808149983 SSTLSS(ph)SSMSLSPK ddPTM_KYSE-520_SHP099_60min_R1 1 SSTLSSSSMSLSPK 14 0 O15119-3;O15119-2;O15119 O15119-3 TBX3 T-box transcription factor TBX3 1 S(0.006)S(0.006)T(0.016)LS(0.044)S(0.521)S(0.194)S(0.194)MS(0.017)LS(0.002)PK 53.008 0.048974000000000004 1269500000.0 1779200.0 1474700.0 1383300.0 1599200.0 1580200.0 1518000.0 1635300.0 1729000.0 1695200.0 1592500.0 True False 1680504.229252732 1403853.1984301724 1472469.7313582562 1751187.4871829883 1704552.749891891 1508525.5989264888 1800612.082990001 1723002.5025516355 1387394.4125144135 1578391.688946251 1.0646940433237153 0.889420039564069 0.93289247635439 1.1094758667616258 1.0799301351047192 0.9557358984407694 1.1407891308602278 1.09161909215445 0.8789924720400998 1.0 20.590023833978012 -5.242125764155063 24.696817762629966 1.0432375886047474 0.955043963945302 0.13569978100490543 0.08421030348213139 1216.9614110293528 1556156.5319969722 0.02255046683945259 0.038979508002938555 5.726301831970475e-06 5.242125764155063 -0.08819362465944536 SSTPLHS(ph)PSPIR ddPTM_KYSE-520_SHP099_60min_R1 4 SSTPLHSPSPIR 12 0 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 1 SSTPLHS(0.98)PS(0.02)PIR;SSTPLHS(0.999)PS(0.001)PIR;S(0.004)S(0.012)T(0.026)PLHS(0.758)PS(0.2)PIR;SSTPLHS(0.958)PS(0.042)PIR 153.05 0.0001281 812040000.0 1029177.0 1186280.0 1208380.0 1548350.0 938440.0 998970.0 873030.0 1006790.0 1288390.0 1017010.0 True False 972086.5001965157 1129289.328157418 1286274.1082763586 1695504.7184715993 1012289.889006802 992735.0576808932 961284.3923517169 1003297.6804765533 1054450.853668858 1008000.0826218065 0.9643714489269886 1.1203266226131037 1.276065479013416 1.6820481939461696 1.004255759953747 0.9848561272919651 0.9536550729752102 0.9953349188890716 1.0460821103568099 1.0 19.943064326414053 -5.945283018457505 24.999976865790135 0.9932106587452508 1.2631960425695328 0.3647976205216851 0.17023248787547318 104.88256157567778 47919.7776528518 0.05616454410994038 0.06368460036636928 1.134271399497101e-06 5.945283018457505 0.26998538382428194 SSTPLPTISSS(ph)AENTR ddPTM_KYSE-520_SHP099_60min_R1 1 SSTPLPTISSSAENTR 16 0 P42166;G5E972;P42167;H0YJH7;P42167-2;P42167-3 P42166;G5E972 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin;Lamina-associated polypeptide 2, isoforms beta/gamma;Thymopoietin;Thymopentin 1 SSTPLPT(0.074)IS(0.21)S(0.171)S(0.499)AENT(0.046)R 53.924 0.066772 128520000.0 320300.0 354280.0 315870.0 276690.0 311690.0 386800.0 365150.0 406120.0 448040.0 441030.0 True False 302532.32049777964 337259.85701487813 336231.485609869 302986.5344101184 336218.22972649237 384385.8377238249 402062.92552057654 404711.2645091206 366687.2301692774 437122.8173161482 0.6920991275524603 0.771544846561866 0.7691922551063956 0.6931382266210643 0.7691619297999793 0.8793543198771493 0.9197939562825094 0.9258525258278019 0.8388654530108219 1.0 18.73767916157363 -6.274099283924895 2.7808653098958804 0.9138480471791053 0.7361722389776885 0.7983511422854266 0.04424045144020959 0.12344445614638061 1.9104732013219647 0.01605884784580062 0.01477205891574079 5.319866280685897e-07 6.274099283924895 -0.17767580820141682 SSTPPRQS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 SSTPPRQSPSR 11 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 SSTPPRQS(0.742)PS(0.258)R 115.57 0.00071185 0.0 141560.0 154730.0 153290.0 109960.0 112820.0 125970.0 105180.0 115850.0 162100.0 131690.0 True False 133707.38460713622 147296.53854553506 163171.31867267206 120410.56533932037 121698.29214200951 125183.774503801 115812.62085787833 115448.14338959326 132666.7262084632 130523.32905326973 1.0243945322032584 1.128507368099842 1.2501314504940177 0.922521408339025 0.9323872829840364 0.959091186317432 0.8872944147066031 0.8845019831089052 1.0164215636449074 1.0 16.993948164001857 -5.281480859587928 24.959641671295465 0.9362470026623865 1.1337607426883993 0.6462708087540752 0.06467006335388827 450.276957835303 560773.4537285947 0.018238716656539054 0.027094621960268173 5.230210164800459e-06 5.281480859587928 0.19751374002601285 SSTS(ph)PCGTSK ddPTM_KYSE-520_SHP099_60min_R1 2 SSTSPCGTSK 10 0 A0A088AWL3;O75376-2;O75376;O75376-3;H0Y459 A0A088AWL3;H0Y459 NCOR1 Nuclear receptor corepressor 1 1 SST(0.083)S(0.912)PCGT(0.005)SK;SST(0.002)S(0.997)PCGTSK 148.78 0.00016859 232520000.0 1016110.0 797060.0 757760.0 873260.0 877200.0 1251830.0 1598400.0 887110.0 1129450.0 1340910.0 True False 959744.3527349343 758768.0411885482 806606.4220588672 956254.3678448085 946230.6494147358 1244016.8646272395 1759981.8708807062 884032.8224630308 924370.3511175119 1329030.5806121954 0.7221386525905554 0.5709184214851057 0.6069133651441772 0.719512689771462 0.7119705620158647 0.9360332883041745 1.3242598752468138 0.6651711671343304 0.6955222585560945 1.0 20.341942870318984 -6.152634876303854 3.549483327946559 0.9279908312498091 0.6516974089626295 0.3566031920452798 0.17431537027317495 0.3039936064108282 7.06158090576432 0.06445939859357153 0.06435019834041038 7.036636612801583e-07 6.152634876303854 -0.27629342228717957 SSTSPCGTSKS(ph)PNREWEGK ddPTM_KYSE-520_SHP099_60min_R1 1 SSTSPCGTSKSPNREWEGK 19 2 H0Y459 H0Y459 NCOR1 1 S(0.003)S(0.003)T(0.014)S(0.023)PCGT(0.075)S(0.303)KS(0.58)PNREWEGK 56.817 0.031876999999999996 641070000.0 171580.0 149510.0 162520.0 130810.0 150610.0 144210.0 124310.0 109010.0 195110.0 142720.0 True False 162062.11536375002 142327.31518091468 172996.29924119383 143242.1430705393 162462.15014632186 143309.93189801654 136876.46794868645 108631.8697531254 159682.94232284534 141455.61183447993 1.1456746979637837 1.0061623808000968 1.22297233031391 1.012629624324483 1.1485026860328602 1.0131088476412402 0.967628404229366 0.7679573001333998 1.1288554780682265 1.0 17.109989886979932 -6.525144306622524 3.129447965622766 0.9475627665260662 1.1025751061706395 0.2930296398296719 0.10220595882354856 0.29202164155877225 5.905670567593224 0.038780702506847405 0.03078924563312848 2.984390805910725e-07 6.525144306622524 0.15501233964457328 SSTVAS(ph)LDTDSTK ddPTM_KYSE-520_SHP099_60min_R1 1 SSTVASLDTDSTK 13 0 C9IZZ8;C9J6Y2;C9J0J6;C9JZ07;G3V1A3;C9J5T5;C9JBU8;A8MPU2;O14713-2;O14713 C9IZZ8 ITGB1BP1 Integrin beta-1-binding protein 1 1 SSTVAS(1)LDTDSTK 164.88 8.5902e-06 0.0 199070.0 229050.0 162030.0 154750.0 158090.0 193760.0 169790.0 218170.0 202110.0 203370.0 True False 188027.19026379343 218046.0941889405 172474.71305716646 169457.39347271607 170530.7835909438 192550.67196837757 186954.03019071268 217413.21919126107 165411.91877848544 201568.3000194656 0.9328212335254874 1.0817479443339237 0.8556638769117488 0.8406946601045474 0.8460198531935604 0.9552626675413883 0.9274971817128904 1.0786081897315467 0.8206246654980545 1.0 17.62090924323151 -6.484311994341082 24.50585564848287 0.96011136528406 0.9125115796973755 0.06037393151715231 0.08832708252546344 1423.9867980255653 904821.7464522541 0.03219076023072871 0.028383167720067944 3.2785967622392964e-07 6.484311994341082 -0.04759978558668454 SSVKT(ph)PETVVPTALELQPSTSTDRPVTSEPTSQATR ddPTM_KYSE-520_SHP099_60min_R1 2 SSVKTPETVVPTALELQPSTSTDRPVTSEPTSQATR 36 2 Q14676;Q14676-2;H0Y6Z8 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 SS(0.001)VKT(0.989)PET(0.009)VVPTALELQPSTSTDRPVTSEPTSQATR;S(0.001)S(0.003)VKT(0.979)PET(0.017)VVPTALELQPSTSTDRPVTSEPTSQATR 178.89 6.829899999999999e-11 1503490000.0 24177.8 32831.9 15543.1 11277.0 27829.0 33532.9 9227.7 13230.0 33996.7 23586.8 True False 22836.60923675062 31254.606242313414 16545.033095839306 12348.762689446314 30018.983974649713 33323.608732702334 10160.525969673357 13184.108217905214 27823.756267065135 23377.839302252734 0.9768485847428184 1.3369330603321266 0.7077229371768756 0.5282251507416411 1.2840786347503477 1.4254357856541175 0.4346221153421253 0.563957517521081 1.1901765559823994 1.0 14.512853974432904 -6.770779837643907 24.99673389544562 0.7608523331795711 1.0288496724566847 0.11569143499929435 0.32565230330110356 451.61979791507616 1208603.0606799987 0.1425033856631568 0.09754799361435373 1.6951969501393708e-07 6.770779837643907 0.26799733927711356 SSVLPS(ph)PSGR ddPTM_KYSE-520_SHP099_60min_R1 4 SSVLPSPSGR 10 0 A0A494C1F2;P35658-2;P35658;P35658-5;A0A0A0MSW3;A0A494BZU9 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 1 SSVLPS(0.927)PS(0.073)GR;SSVLPS(0.998)PS(0.002)GR;SSVLPS(0.835)PS(0.165)GR;SSVLPS(0.854)PS(0.146)GR 153.11 0.00013063 2054360000.0 3798310.0 4163330.0 4122290.0 2547540.0 3005070.0 4101480.0 3020670.0 3579530.0 4314830.0 4206910.0 True False 3587610.1725567374 3963317.377514264 4388019.409297201 2789657.43565417 3241551.912490584 4075881.1419532457 3326028.8024982614 3567113.445898578 3531365.6400127294 4169640.050326451 0.8604124407035698 0.9505178695710116 1.0523736716682899 0.6690403492828502 0.7774176843482676 0.9775139083370362 0.7976776801723829 0.8554967342131368 0.8469233788504719 1.0 21.991491415818363 -5.234553473054678 24.995646409707458 0.8408464183311655 0.9540429515025695 0.1988322130505481 0.09905127885471127 1193.0852789746518 1109201.9112470842 0.026772057611764835 0.04635616121687663 5.82702024459146e-06 5.234553473054678 0.11319653317140399 SSVQGASS(ph)REGS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 4 SSVQGASSREGSPAR 15 1 O95817;C9JFK9 O95817 BAG3 BAG family molecular chaperone regulator 3 2 S(0.002)S(0.002)VQGAS(0.442)S(0.571)REGS(0.983)PAR;SSVQGAS(0.461)S(0.589)REGS(0.95)PAR;SSVQGAS(0.083)S(0.917)REGS(1)PAR;SSVQGAS(0.439)S(0.561)REGS(1)PAR 218.0 1.0442e-13 2370180000.0 2985730.0 3363200.0 3536880.0 1896000.0 2359370.0 2099650.0 1577830.0 1542650.0 4178610.0 1768150.0 True False 2820105.6049948055 3201626.8237338844 3764872.9440080915 2076195.2699468152 2545038.996021031 2086545.3055243783 1737332.454536853 1537298.9072072157 3419879.75818597 1752485.5665998834 1.6092033274010265 1.8269062437675756 2.148304679799776 1.1847146187771367 1.4522453391492602 1.1906205365061162 0.9913533598496733 0.8772105953430669 1.9514453205004774 1.0 20.740971131631103 -5.275977523138908 24.798717039717765 1.2272582634094746 1.8580148954462268 0.46274188991719445 0.3090618661013575 603.1466918106447 1028827.7193098026 0.08623728967803815 0.12855390160073532 5.296908572718192e-06 5.275977523138908 0.6307566320367521 SSYSS(ph)PTSLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 SSYSSPTSLSPR 12 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9K0F0;A0A087WXJ0;C9J0X3;C9J760;Q96JY6-2 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 2 SSYS(0.366)S(0.619)PT(0.015)S(0.001)LS(0.999)PR;SSY(0.004)S(0.195)S(0.793)PT(0.009)S(0.005)LS(0.993)PR 175.88 1.462e-07 570200000.0 1854860.0 1705080.0 1564730.0 1526760.0 1505930.0 1612950.0 1580130.0 1618020.0 1984390.0 1559800.0 True False 1751967.218228263 1623165.3974227426 1665594.9994565202 1671862.811362867 1624438.1234303857 1602882.980756575 1739864.96098269 1612407.466268706 1624074.7984010614 1545981.3855060388 1.1332395296951134 1.0499255764916209 1.0773706689303564 1.081424929845209 1.0507488244424534 1.03680613219797 1.1254113259670253 1.0429669343922432 1.050513811891377 1.0 20.560091517823803 -13.999999999996705 0.12036440316162182 0.766578017356016 1.1054871361173488 0.4012194913138969 0.029843614634478904 168.62624857898615 1.312529545438007 9.554287967993844 0.28439305615312654 1.0000000000075874e-14 13.999999999996705 0.3389091187613328 SSYSSPTSLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 SSYSSPTSLSPR 12 0 Q96JY6;Q96JY6-3;Q96JY6-5;C9JSR2;C9JS55;Q96JY6-4;C9K0F0;A0A087WXJ0;C9J0X3;C9J760;Q96JY6-2 Q96JY6 PDLIM2 PDZ and LIM domain protein 2 1 SSYSSPTSLS(1)PR;SSYSSPTSLS(1)PR;SSYSSPTSLS(1)PR;SSYSSPTSLS(1)PR;SSYSSPTSLS(1)PR;SSYSSPTSLS(1)PR;SSYSSPTSLS(1)PR 261.63 1.5116e-21 9847450000.0 5531370.0 5311300.0 4603900.0 4412280.0 4457530.0 4912350.0 4664510.0 4909290.0 5964500.0 4723930.0 True False 5224533.879587282 5056137.175576165 4900674.7605004525 4831621.764599644 4808312.251123653 4881690.201506283 5136044.192030637 4892260.818826895 4881497.152809244 4682079.655361924 1.1158575385628346 1.0798913191888715 1.0466876091884068 1.0319392492749377 1.0269607962814487 1.042632881291493 1.0969578841207521 1.0448905569610016 1.0425916498919334 1.0 22.158718048288854 ST(ph)DKEAQGQQFHHHR ddPTM_KYSE-520_SHP099_60min_R1 2 STDKEAQGQQFHHHR 15 1 A6ND36 A6ND36 FAM83G Protein FAM83G 1 S(0.454)T(0.546)DKEAQGQQFHHHR;S(0.453)T(0.547)DKEAQGQQFHHHR 96.48700000000001 0.0029704999999999996 511360000.0 76606.0 83443.0 121018.0 130433.0 125585.0 98906.0 91723.0 124652.0 138236.0 73255.0 True False 72356.51246972507 79434.2730295035 128819.01391564631 142829.31310388862 135467.8250190944 98288.69096668204 100995.25597021465 124219.61130599554 113135.82704597851 72606.01769152761 0.9965635737954589 1.094045308571891 1.7742195207970783 1.9671828540536436 1.8657933505544972 1.3537265104425544 1.3910039302706418 1.7108721185308957 1.5582155672914744 1.0 16.14780150537294 -9.915554010253011 13.40427233775452 0.9999950914918825 1.5379915234160473 0.20950806827105728 0.30389982377554464 0.0 0.0 0.32437923395929835 0.07867352025712532 1.214635555109271e-10 9.915554010253011 0.5379964319241648 ST(ph)PKEDDSSASTSQSTR ddPTM_KYSE-520_SHP099_60min_R1 1 STPKEDDSSASTSQSTR 17 1 E7EX17;P23588-2;P23588;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 S(0.226)T(0.774)PKEDDSSASTSQSTR 99.569 0.0026145 854920000.0 659750.0 663040.0 559310.0 527300.0 522170.0 610060.0 514870.0 626430.0 744010.0 609050.0 True False 623152.3523209809 631186.5631566701 595364.0175276406 577414.4334614744 563261.8082591128 606252.3892497339 566918.0842469655 624257.060539861 608916.5389658145 603654.2908337294 1.0323000462074443 1.0456093375645765 0.9862665213650037 0.956531647715095 0.9330867299579216 1.004303950879594 0.9391436337907476 1.0341300807746703 1.00871732084405 1.0 19.203363037747266 -4.7959200839330896 6.470255139722534 0.9802637974406043 1.0390639681088039 0.3508356502112592 0.030449921024927284 0.17591017665406983 21.367154429832567 0.008310407339182872 0.018249105343841728 1.5998523960398877e-05 4.7959200839330896 0.058800170668199536 ST(ph)PPPNNLVNPVQELETERR ddPTM_KYSE-520_SHP099_60min_R1 3 STPPPNNLVNPVQELETERR 20 1 Q8NDI1-3;Q8NDI1-2;Q8NDI1 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 S(0.112)T(0.888)PPPNNLVNPVQELETERR;S(0.208)T(0.792)PPPNNLVNPVQELETERR;S(0.463)T(0.537)PPPNNLVNPVQELETERR 112.88 0.00016399 3316180000.0 381517.0 397029.0 407655.0 305092.0 297809.0 350165.0 303084.0 285073.0 386525.0 284443.0 True False 360353.49147471564 377955.13088732114 433933.0935710614 334087.8519507457 321244.87399857887 347979.4903478884 333722.6885347901 284084.14829953806 316341.8035023206 281923.0563133053 1.2781980168172178 1.3406322130223147 1.5391898032235614 1.1850320307944906 1.1394771261332193 1.2343066044274633 1.183736771652756 1.0076655383014546 1.1220856060483584 1.0 18.104941944075044 -6.244873206732946 0.5395908920787544 1.0237376181542595 1.392432630168314 0.6075986853000017 0.09484449798493895 0.6887691608092368 0.4316874190930668 0.0867500533452135 0.10875294983384401 5.690190330035187e-07 6.244873206732946 0.36869501201405463 ST(ph)PQKLDVIK ddPTM_KYSE-520_SHP099_60min_R1 2 STPQKLDVIK 10 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 S(0.16)T(0.84)PQKLDVIK;S(0.152)T(0.848)PQKLDVIK 109.0 0.0020989999999999997 417190000.0 1623370.0 1465430.0 1348120.0 1270520.0 1292560.0 1468440.0 1245660.0 1376210.0 1614860.0 1476480.0 True False 1533318.429992134 1395028.543144725 1435021.9722682657 1391269.8388042327 1394277.1183396177 1459274.9212698408 1371583.4692700598 1371436.2487198282 1321642.1313078273 1463399.5358840574 1.0477784039106162 0.9532793396042533 0.9806084647972445 0.9507108651389244 0.9527658606897931 0.997181484267914 0.9372583738325908 0.937157772085343 0.903131440799185 1.0 20.480892275742608 ST(ph)SPIIGSPPVR ddPTM_KYSE-520_SHP099_60min_R1 3 STSPIIGSPPVR 12 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 S(0.084)T(0.493)S(0.423)PIIGSPPVR;S(0.037)T(0.733)S(0.229)PIIGSPPVR;S(0.009)T(0.495)S(0.495)PIIGSPPVR 162.49 1.6262e-05 9100200000.0 8572400.0 7710670.0 5536310.0 5350010.0 4771110.0 6787990.0 6057820.0 7474700.0 7772950.0 7299820.0 True False 8096871.883344273 7340237.839248371 5893189.401009195 5858473.34186084 5146569.213097524 6745623.636532949 6670203.564225823 7448772.010308087 6361578.220123833 7235149.273974023 1.1191022571531457 1.014524726622071 0.8145221581271211 0.8097239075542914 0.7113286842070485 0.9323406305932105 0.9219165094795764 1.029525684715656 0.8792601201757422 1.0 22.786591351748132 -9.278155769683021 14.533130845124994 0.9999996895683899 0.9097240099171342 0.046689747767137524 0.11366055489795873 0.0 0.0 0.11953829283945683 0.028992294569593877 5.270407922420911e-10 9.278155769683021 -0.09027567965125571 ST(ph)SYGYS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 STSYGYSR 8 0 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 2 S(0.344)T(0.417)S(0.237)Y(0.003)GY(0.001)S(0.999)R 65.395 0.066058 732100000.0 2758600.0 2670900.0 2236100.0 2518000.0 2226600.0 2708100.0 2421000.0 2462900.0 2856800.0 2608600.0 True False 2605574.9588672393 2542585.954897367 2380242.583886501 2757309.9629356945 2401820.7523789927 2691197.7433813126 2665738.3066830537 2454356.774745182 2338077.134067472 2585489.8334600907 1.007768402392157 0.9834058993357918 0.9206157197304029 1.0664555424863773 0.9289615922274587 1.0408850611412988 1.031038015382783 0.9492811547669415 0.904307224035179 1.0 21.302006201259942 -7.395117250856094 7.954318563100423 0.9439265032654023 0.9952315266015703 0.15374971677279092 0.0483867751519725 0.4768657542196766 28.36026245643973 0.025753290379353675 0.012276442251914575 4.026083234265279e-08 7.395117250856094 0.05130502333616804 ST(ph)TPPPAEPVSLPQEPPKPR ddPTM_KYSE-520_SHP099_60min_R1 1 STTPPPAEPVSLPQEPPKPR 20 1 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.002)T(0.499)T(0.499)PPPAEPVSLPQEPPKPR 194.97 1.167e-12 42688000000.0 6074000.0 6732100.0 5033900.0 4684500.0 4280400.0 6671900.0 5595000.0 6629900.0 7764700.0 7550100.0 True False 5737063.111781196 6408679.81091189 5358393.248524783 5129713.471553722 4617243.127855498 6630258.197284359 6160597.201937903 6606902.424330291 6354826.212158249 7483211.987888907 0.7666578363764464 0.8564076256671497 0.7160552523698372 0.6854962120351302 0.6170135411542806 0.8860176897320297 0.8232557372300062 0.8828966004201316 0.8492110369775869 1.0 22.835226214351195 -6.29451632812866 24.681363525286976 0.876893506700596 0.7323805723899467 0.5523253381243443 0.07158888591178608 500.5926057362046 373530.6197608925 0.026567195188648973 0.02343178843636669 5.075556561480593e-07 6.29451632812866 -0.14451293431064927 STAALSGEAASCS(ph)PIIMPYK ddPTM_KYSE-520_SHP099_60min_R1 1 STAALSGEAASCSPIIMPYK 20 0 Q14244-5;Q14244-3;Q14244-6;Q14244;Q14244-7;Q14244-2;Q14244-4 Q14244-5 MAP7 Ensconsin 1 STAALSGEAAS(0.002)CS(0.998)PIIMPYK 231.86 1.9468e-23 0.0 145600.0 161010.0 95774.0 94761.0 92702.0 131910.0 91098.0 125860.0 145910.0 134600.0 True False 137523.27775359576 153274.83791906293 101947.74528381809 103767.05694906654 99997.11999777128 131086.70076047 100307.07487080248 125423.42103594478 119416.42209177578 133407.54871721542 1.0308507957454827 1.1489217768625695 0.7641827337665665 0.7778199805546389 0.7495611827014049 0.982603323582049 0.7518845510265977 0.9401523545103535 0.8951249253886172 1.0 17.025480776557306 -4.757625505645419 24.999932994346334 0.8495003004684651 1.0898863401108845 0.48910028802312056 0.09464155818059503 73.25548477693673 480170.3576909978 0.023839255517031404 0.05828837170772575 1.7473282335557518e-05 4.757625505645419 0.24038603964241934 STAGDTHLGGEDFDNR ddPTM_KYSE-520_SHP099_60min_R1 7 STAGDTHLGGEDFDNR 16 0 E9PKE3;P11142;P11142-2;E9PN89;P54652 E9PKE3 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ;;;;;; 169.37 6.8652e-08 5100930000.0 6045744.0 7767800.0 5650310.0 6424540.0 6425360.0 7020020.0 5274364.0 6154991.0 6147500.0 5941829.0 False True 5710374.528428124 7394623.2282944955 6014538.023415651 7035126.349991608 6930999.276702548 6976205.451235797 5807548.1859521065 6133640.772806702 5031268.965863825 5889189.017733004 0.9696368228687432 1.2556267435173947 1.0212845954349923 1.1945832149058315 1.1769021601841168 1.184578289171848 0.9861371690507695 1.041508559894686 0.8543228873643066 1.0 22.489637547921554 -6.802106997229745 8.451653184525304 0.9732762952866815 1.138868450625857 0.4363723495777114 0.09078135255549397 0.2483768536357982 46.272947236656485 0.03588257572080274 0.024331816405204758 1.5772226411291925e-07 6.802106997229745 0.1655921553391756 STANQS(ph)FRK ddPTM_KYSE-520_SHP099_60min_R1 1 STANQSFRK 9 1 Q13464;J3KRH6 Q13464 ROCK1 Rho-associated protein kinase 1 1 STANQS(1)FRK 73.435 0.018393 0.0 244740.0 269050.0 341580.0 349660.0 253510.0 215510.0 279500.0 313070.0 307140.0 326640.0 True False 231163.78432290556 256124.43414771635 363598.7933473237 382891.581270888 273459.79472541006 214164.9221506245 307754.58765713027 311984.03324108734 251371.1183693238 323746.2237220747 0.7140277395833099 0.7911271711622824 1.1230981759943588 1.1826904940197467 0.8446733110319339 0.6615209891512988 0.9506044089685731 0.9636684859339555 0.776444943447796 1.0 18.304503839284777 STAPETAIECTQAPAPAS(ph)EDEKVVVEPPEGEEKVEK ddPTM_KYSE-520_SHP099_60min_R1 2 STAPETAIECTQAPAPASEDEKVVVEPPEGEEKVEK 36 2 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9;A0A2R8Y6G9 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 STAPETAIECTQAPAPAS(1)EDEKVVVEPPEGEEKVEK;STAPETAIECTQAPAPAS(1)EDEKVVVEPPEGEEKVEK 263.76 9.670799999999999e-42 1016850000.0 915500.0 1107830.0 839430.0 619490.0 750950.0 855590.0 645790.0 778220.0 1208380.0 990850.0 True False 864715.389995997 1054608.183913268 893541.000935488 678366.1433435407 810045.4926789752 850249.9454450043 711072.7555030352 775520.5364579137 988968.6527808909 982071.8398696354 0.8805011557105468 1.0738605274062856 0.9098529910541989 0.6907500203178517 0.8248332349968454 0.8657716380075313 0.7240537062924298 0.7896780102775982 1.0070227173117712 1.0 19.90546903791034 -5.0026127434575365 24.9518920863988 0.8273564429695018 0.9808498513961392 0.19505515221392822 0.10632080826020682 132.05437216588854 1261182.9163919128 0.026918866046751238 0.05458641550260119 9.940019961412956e-06 5.0026127434575365 0.1534934084266374 STAPSAAASASASAAAS(ph)SPAGGGAEALELLEHCGVCR ddPTM_KYSE-520_SHP099_60min_R1 2 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 37 0 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 STAPSAAASASAS(0.002)AAAS(0.55)S(0.448)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.554)S(0.446)PAGGGAEALELLEHCGVCR 161.15 2.7268e-10 315692000.0 54993.0 49267.0 50060.0 43073.8 45491.0 34542.2 43750.0 52227.0 56370.0 63626.0 True False 51942.42866417235 46900.13936872537 53286.94769883196 47167.521001389796 49070.8828916163 34326.6093170215 48172.67695885318 52045.836726873415 46134.628972060855 63062.323140278924 0.8236681758239237 0.7437109359957831 0.8449886563851741 0.7479508944900118 0.7781331300221944 0.5443283343790508 0.7638899831155208 0.8253079514863432 0.7315719858501997 1.0 15.944490697703028 -9.520285344005496 0.9888097797128612 1.0084680828018429 0.7535943021929306 0.45640980132736797 0.07977535182368199 35.70847299959857 20.64753921089386 1.2870813281805804 0.02554098657895097 3.0179681766798334e-10 9.520285344005496 -0.2548737806089123 STAPSAAASASASAAASS(ph)PAGGGAEALELLEHCGVCR ddPTM_KYSE-520_SHP099_60min_R1 13 STAPSAAASASASAAASSPAGGGAEALELLEHCGVCR 37 0 Q13263-2;Q13263 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 STAPSAAAS(0.001)AS(0.002)AS(0.002)AAAS(0.202)S(0.794)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.048)S(0.952)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.004)S(0.996)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.242)S(0.758)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.002)S(0.998)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.036)S(0.964)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.024)S(0.976)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.178)S(0.822)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.066)S(0.934)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.004)S(0.996)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.006)S(0.994)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.147)S(0.853)PAGGGAEALELLEHCGVCR;STAPSAAASASASAAAS(0.001)S(0.999)PAGGGAEALELLEHCGVCR 363.56 1.4899999999999997e-97 64951203000.0 3078966.0 4165563.0 2988345.0 2895788.0 2725708.0 3518275.0 2622501.0 3482572.0 4251866.0 3466907.0 True False 2908169.6182134487 3965443.1008424666 3180978.5002210555 3171002.820869588 2940205.7124429345 3496316.1406871513 2887608.994223301 3470491.7705704174 3479834.3152194484 3436192.901192828 0.8463347960482419 1.1540222609347446 0.9257275687627495 0.9228244490490674 0.8556579321906759 1.0174970501433294 0.840351248389142 1.0099816484009623 1.0127005134116513 1.0 21.712379598170337 -10.01586130390175 5.56302348761294 1.000000149689312 0.9553339576429961 0.021407408190222244 0.09305328628119397 1.6700810137738992e-07 2.9392232331938885e-08 0.0870866035884498 0.021121533018004422 9.641368808008101e-11 10.01586130390175 -0.044666192046315945 STAQQELDGKPAS(ph)PTPVIVASHTANK ddPTM_KYSE-520_SHP099_60min_R1 11 STAQQELDGKPASPTPVIVASHTANK 26 1 P35606-2;P35606;H0YAC7 P35606-2 COPB2 Coatomer subunit beta 1 STAQQELDGKPAS(0.608)PT(0.392)PVIVASHTANK;STAQQELDGKPAS(0.733)PT(0.262)PVIVAS(0.004)HTANK;STAQQELDGKPAS(0.788)PT(0.209)PVIVAS(0.001)HT(0.001)ANK;STAQQELDGKPAS(0.999)PT(0.001)PVIVASHTANK;STAQQELDGKPAS(0.853)PT(0.147)PVIVASHTANK;STAQQELDGKPAS(0.979)PT(0.021)PVIVASHTANK;STAQQELDGKPAS(0.951)PT(0.049)PVIVASHTANK;STAQQELDGKPAS(0.751)PT(0.249)PVIVASHTANK;STAQQELDGKPAS(0.965)PT(0.035)PVIVASHTANK;S(0.001)T(0.001)AQQELDGKPAS(0.905)PT(0.075)PVIVAS(0.013)HT(0.004)ANK;STAQQELDGKPAS(0.989)PT(0.011)PVIVASHTANK 319.86 9.402999999999998e-62 61416110000.0 30312990.0 27443440.0 19661450.0 21954020.0 21009780.0 31148490.0 25549380.0 31923220.0 30113400.0 30816470.0 True False 28631468.017252576 26125015.948956776 20928858.52643226 24040523.460083228 22663130.156704027 30954080.719964325 28132160.668319672 31812485.80075557 24645565.65703843 30543460.05065083 0.9374009352500483 0.8553391104227596 0.6852157054808301 0.787092340560511 0.7419961628159123 1.0134438164056252 0.9210534962858676 1.0415481987960857 0.8069015630897153 1.0 24.864360168231105 -6.261152315037422 24.99999974866059 0.9569651841312926 0.7971544384327884 0.44578182770603425 0.0864484613868256 25.123840062356084 2188048.135449012 0.029601270182851736 0.02786541802698676 5.480847078528236e-07 6.261152315037422 -0.15981074569850418 STAQQELDGKPAS(ph)PTPVIVASHTANKEEK ddPTM_KYSE-520_SHP099_60min_R1 22 STAQQELDGKPASPTPVIVASHTANKEEK 29 2 P35606-2;P35606;H0YAC7 P35606-2 COPB2 Coatomer subunit beta 1 STAQQELDGKPAS(0.801)PT(0.195)PVIVAS(0.003)HT(0.001)ANKEEK;STAQQELDGKPAS(0.727)PT(0.273)PVIVASHTANKEEK;STAQQELDGKPAS(0.996)PT(0.003)PVIVAS(0.001)HTANKEEK;STAQQELDGKPAS(0.855)PT(0.145)PVIVASHTANKEEK;STAQQELDGKPAS(0.793)PT(0.207)PVIVASHTANKEEK;STAQQELDGKPAS(0.995)PT(0.005)PVIVASHTANKEEK;STAQQELDGKPAS(0.996)PT(0.004)PVIVASHTANKEEK;STAQQELDGKPAS(0.999)PT(0.001)PVIVASHTANKEEK;STAQQELDGKPAS(0.985)PT(0.015)PVIVASHTANKEEK;STAQQELDGKPAS(0.805)PT(0.194)PVIVASHTANKEEK;STAQQELDGKPAS(0.993)PT(0.007)PVIVASHTANKEEK;STAQQELDGKPAS(0.99)PT(0.01)PVIVASHTANKEEK;STAQQELDGKPAS(0.843)PT(0.157)PVIVASHTANKEEK;STAQQELDGKPAS(0.982)PT(0.018)PVIVASHTANKEEK;STAQQELDGKPAS(0.915)PT(0.085)PVIVASHTANKEEK;STAQQELDGKPAS(0.935)PT(0.064)PVIVAS(0.001)HTANKEEK;STAQQELDGKPAS(0.594)PT(0.406)PVIVASHTANKEEK;STAQQELDGKPAS(0.837)PT(0.163)PVIVASHTANKEEK;STAQQELDGKPAS(0.992)PT(0.008)PVIVASHTANKEEK;STAQQELDGKPAS(0.999)PT(0.001)PVIVASHTANKEEK;STAQQELDGKPAS(0.962)PT(0.038)PVIVASHTANKEEK;S(0.003)T(0.003)AQQELDGKPAS(0.467)PT(0.467)PVIVAS(0.046)HT(0.016)ANKEEK 305.87 8.6369e-55 357808430000.0 49987700.0 46734600.0 42905150.0 40123860.0 39416030.0 43042400.0 38830100.0 42815870.0 55892550.0 42672770.0 True False 47214782.6329905 44489399.66593528 45670884.61966719 43937219.590721585 42517847.31446733 42773756.415832356 42755425.45325632 42667351.7402692 45743871.856525786 42294722.45671271 1.1163279929620846 1.0518900960153776 1.0798246676381402 1.0388345646596906 1.0052754775251922 1.0113260929802748 1.010892682816754 1.0088103021349264 1.0815503495345826 1.0 25.33397431903336 -4.705993796019644 0.8940619179999668 1.01915501822493 1.120611036875603 0.5536007994364212 0.025639970355244603 0.9677169171201343 0.9543892603977362 0.00967528917471546 0.08445472957218728 1.967914401542465e-05 4.705993796019644 0.101456018650673 STAQQELDGKPASPT(ph)PVIVASHTANK ddPTM_KYSE-520_SHP099_60min_R1 2 STAQQELDGKPASPTPVIVASHTANK 26 1 P35606-2;P35606;H0YAC7 P35606-2 COPB2 Coatomer subunit beta 1 STAQQELDGKPAS(0.382)PT(0.618)PVIVASHTANK;STAQQELDGKPAS(0.398)PT(0.602)PVIVASHTANK 201.39 2.8761999999999997e-15 42878900000.0 3329600.0 3148200.0 2516600.0 2802200.0 2682600.0 3532400.0 2660500.0 3625800.0 3388100.0 3417700.0 True False 3144900.450606954 2996955.7464554617 2678824.06270237 3068520.245487849 2893705.358093905 3510352.9813227486 2929449.303977805 3613222.946068078 2772906.4470505468 3387421.8369303634 0.9284053188535918 0.88473059770178 0.7908150185185925 0.9058571365497547 0.8542500749526201 1.0362904740862695 0.8648020367703696 1.0666586920695806 0.8185890569694496 1.0 21.691756226706126 -6.22719490282259 24.99189773136703 0.9556551224240033 0.8707542769504588 0.2310125126128142 0.07697115117978494 906.8355488591374 661816.1065789285 0.023623892243843356 0.023622740745037247 5.926592910546423e-07 6.22719490282259 -0.08490084547354448 STAQQELDGKPASPT(ph)PVIVASHTANKEEK ddPTM_KYSE-520_SHP099_60min_R1 1 STAQQELDGKPASPTPVIVASHTANKEEK 29 2 P35606-2;P35606;H0YAC7 P35606-2 COPB2 Coatomer subunit beta 1 STAQQELDGKPAS(0.216)PT(0.74)PVIVAS(0.043)HT(0.001)ANKEEK 57.745 0.037892 9709500000.0 6370500.0 5775400.0 5607300.0 5465000.0 5102200.0 5393400.0 4977500.0 5693000.0 6944800.0 5460200.0 True False 6017115.665723095 5497941.114947868 5968755.529997211 5984391.95688783 5503714.112453118 5359737.790019852 5480674.275718663 5673252.311756191 5683799.38416123 5411826.875971323 1.1118455567082666 1.015912230924994 1.1029095473284019 1.1057988538877166 1.0169789682093817 0.9903749533853812 1.0127216559814625 1.0483063190630884 1.050255212227404 1.0 22.36768425764591 -5.774630669729322 24.998954572989312 1.0203657001129074 1.080587166722711 0.5138359280734066 0.03058107865745537 209.02086481744828 396116.21963635954 0.009826189069564562 0.011203196018682006 1.6802323044250023e-06 5.774630669729322 0.06022146660980354 STAYEDYYYHPPPR ddPTM_KYSE-520_SHP099_60min_R1 2 STAYEDYYYHPPPR 14 0 B4DT28;O43390-4;O43390-3;O43390;O43390-2;A0A286YEZ8 B4DT28 HNRNPR Heterogeneous nuclear ribonucleoprotein R 0 ; 141.38 9.446100000000001e-06 369570000.0 537860.0 420470.0 309364.0 325314.0 430930.0 394180.0 339119.0 350210.0 356103.0 367910.0 False True 508023.83360267256 400269.99006166303 329306.0984399011 356231.7447507799 464841.7393436988 391719.7764063536 373400.4580024988 348995.20324962883 291443.67182610906 364650.6036296486 1.3931797412260383 1.0976808651280627 0.9030729557611137 0.9769125327229151 1.2747592756374746 1.0742331769295446 1.0239951731486419 0.9570673948591075 0.799240886824663 1.0 18.47615525671268 -7.116872416195363 2.0232100095481713 0.8998860453903211 1.1093513270614024 0.30050939103880314 0.1381308897213445 0.4786400685438816 3.7632147234586486 0.0928933732456296 0.043603722452319416 7.640602105399703e-08 7.116872416195363 0.20946528167108125 STDKEAQGQQFHHHR ddPTM_KYSE-520_SHP099_60min_R1 4 STDKEAQGQQFHHHR 15 1 A6ND36 A6ND36 FAM83G Protein FAM83G 0 ;;; 143.56 3.5567e-05 3236770000.0 1892340.0 1796830.0 1865450.0 2484610.0 1938000.0 1684160.0 1941610.0 1836550.0 2088990.0 853510.0 False True 1787368.1279137328 1710507.5897031857 1985699.891825534 2720746.5873747673 2090509.5742883713 1673648.5327325677 2137886.887087516 1830179.4367039923 1709682.0751524803 845948.5654207311 2.1128567397295464 2.021999515836365 2.3473057027266777 3.2162080516344496 2.4712017488305094 1.9784282415564847 2.5272067055569054 2.163464200443151 2.021023670986631 1.0 19.690210423044153 -8.422926310114187 0.9222148098789278 0.9949446857146591 2.3993870121743166 0.6051259877830719 0.33220166029474507 1.051490073395936 1.487784478358419 0.3544942796977798 0.11618893123820735 3.776362617653981e-09 8.422926310114187 1.4044423264596575 STDSEVSQS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 9 STDSEVSQSPAK 12 0 A0A0G2JNJ7;H7C148;H7C3F5;A0A2H2FJL5;B7Z6J7;O75175 A0A0G2JNJ7 CNOT3 CCR4-NOT transcription complex subunit 3 1 STDSEVS(0.001)QS(0.999)PAK;STDSEVS(0.001)QS(0.999)PAK;STDSEVS(0.005)QS(0.995)PAK;STDSEVSQS(1)PAK;STDSEVSQS(1)PAK;STDSEVSQS(1)PAK;STDSEVSQS(1)PAK;STDSEVSQS(1)PAK;STDSEVSQS(1)PAK 337.53 1.1437e-50 13827540000.0 22344680.0 23269056.0 18981148.0 15906549.0 16779554.0 21838019.0 17133887.0 19842193.0 23517984.0 20303040.0 True False 21105176.057384763 22151175.62219486 20204703.170990586 17418302.63448168 18100009.43719749 21701719.82301914 18865947.508582722 19773365.063685637 19247710.945731126 20123170.86112611 1.0487997246077996 1.1007795826544635 1.004051663151257 0.8655843929711053 0.8994611019361289 1.0784443452171082 0.937523595996887 0.9826167655259427 0.9564949320643003 1.0 24.262354316531333 -4.956442849715635 5.835686208414071 0.9588465889876108 1.0716861749962798 0.4031592226164352 0.05538086366334316 0.18499969800905836 15.354604266697974 0.015129129125756783 0.03181983461206068 1.1054959357723843e-05 4.956442849715635 0.11283958600866906 STDSSSVS(ph)GS(ph)LQQET(ph)KYILPT(ph)LEK ddPTM_KYSE-520_SHP099_60min_R1 1 STDSSSVSGSLQQETKYILPTLEK 24 1 Q9H8G2;A0A3B3ISJ3 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 4 S(0.249)T(0.26)DS(0.28)S(0.288)S(0.294)VS(0.301)GS(0.304)LQQET(0.77)KY(0.264)ILPT(0.99)LEK 50.492 0.061154999999999994 940240000.0 1031300.0 932440.0 805760.0 870920.0 862560.0 826620.0 805760.0 1043300.0 1075400.0 970670.0 True False 974091.7331544191 887644.1827790258 857700.578861584 953691.9749483544 930438.5647049419 821460.7579608801 887214.0842597844 1039681.0358080512 880134.4686278915 962070.6189698318 1.0124950434485354 0.9226393211441166 0.8915151985204521 0.9912910301424139 0.967120860318174 0.8538466322155079 0.922192266103914 1.0806701871026092 0.9148335384883949 1.0 19.875783270613276 STELLIR ddPTM_KYSE-520_SHP099_60min_R1 16 STELLIR 7 0 Q71DI3;P68431;K7EK07;Q16695;P84243;Q6NXT2;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;K7EP01;Q5TEC6 Q71DI3;Q5TEC6 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A;H3F3C;HIST2H3PS2 Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3;Histone H3.3C 0 ;;;;;;;;;;;;;;; 202.71 0.00019886 691425540000.0 99392670.0 108546730.0 841063630.0 81291460.0 209076550.0 77694060.0 203568820.0 77185860.0 708491110.0 141876200.0 False True 93879160.46072456 103331982.15883647 895279937.3391885 89017375.9172314 225529685.0021579 77209142.55239177 224147542.9658271 76918120.26697516 579846984.0314622 140619287.2460132 0.6676122621535063 0.7348350584230835 6.366693750714991 0.6330381675274435 1.603831803012869 0.5490650967197303 1.5940028381290354 0.546995520837814 4.123523845039983 1.0 27.06721924615385 STELLIRK ddPTM_KYSE-520_SHP099_60min_R1 2 STELLIRK 8 1 Q71DI3;P68431;K7EK07;Q16695;P84243;Q6NXT2;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;K7EP01;Q5TEC6 Q71DI3;Q5TEC6 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A;H3F3C;HIST2H3PS2 Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3;Histone H3.3C 0 ; 133.23 0.0018683 5878100000.0 2732100.0 2759700.0 23244000.0 2747500.0 6702000.0 2022620.0 5473800.0 2382100.0 19405700.0 3627800.0 False True 2580544.966693674 2627119.869605848 24742345.431714937 3008621.5739340037 7229409.270836267 2009996.0783272036 6027145.123139894 2373837.051086321 15882114.05788754 3595660.5143856923 0.7176831506671181 0.7306362375132858 6.881168378584287 0.8367368281563193 2.010592835978952 0.5590060769879454 1.6762275245469365 0.6601949882612552 4.417022684523639 1.0 21.777825384021753 STELLIRKLPFQR ddPTM_KYSE-520_SHP099_60min_R1 2 STELLIRKLPFQR 13 2 Q71DI3;P68431;K7EK07;Q16695;P84243;Q6NXT2;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;K7EP01;Q5TEC6 Q71DI3;Q5TEC6 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A;H3F3C;HIST2H3PS2 Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3;Histone H3.3C 0 ; 178.22 1.7875999999999997e-07 5796200000.0 709420.0 808000.0 7645700.0 403200.0 1881650.0 714830.0 1305610.0 522560.0 4018100.0 761380.0 False True 670067.0584062918 769182.4671672734 8138554.055552523 441520.00677349966 2029725.149876017 710368.4808172741 1437593.8003256763 520747.36132642144 3288514.328058147 754634.7655446756 0.8879355802308616 1.0192778046901902 10.784758968371047 0.5850777448012511 2.689678825505759 0.9413407826560292 1.9050193099546093 0.6900654264855657 4.357756199695602 1.0 19.525419040160703 STFAGS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 5 STFAGSPER 9 0 H0YE03;H7C3G7;Q2TBE0-3;Q2TBE0-2;Q2TBE0 H0YE03 CWF19L2 CWF19-like protein 2 1 S(0.008)T(0.08)FAGS(0.912)PER;STFAGS(1)PER;STFAGS(1)PER;STFAGS(1)PER;STFAGS(1)PER 144.27 0.00035997 4435140000.0 6531320.0 5620770.0 5273050.0 5601780.0 5789150.0 5560300.0 5380570.0 5936170.0 6520840.0 5779430.0 True False 6169014.659736371 5350739.772252223 5612959.2401783 6134171.486963433 6244723.169242281 5525596.10521144 5924490.524902787 5915578.811782497 5336819.8329993505 5728228.746528507 1.0769497750024375 0.9341002269671834 0.9798769372783752 1.0708670617738407 1.09016651491559 0.9646256023836566 1.0342622103723111 1.0327064566629833 0.9316701670186681 1.0 22.449657674512412 -9.411233453965082 8.657896664196446 1.000000002229037 1.013302349041402 0.004738621738374138 0.05523775815339568 0.0 0.0 0.053567960140810694 0.012992138694672896 3.879417727546693e-10 9.411233453965082 0.013302346812364974 STFREES(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 10 STFREESPLR 10 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 S(0.001)T(0.003)FREES(0.995)PLR;ST(0.001)FREES(0.999)PLR;S(0.049)T(0.395)FREES(0.556)PLR;S(0.046)T(0.046)FREES(0.907)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR;STFREES(1)PLR;S(0.002)T(0.002)FREES(0.996)PLR 177.31 1.5135e-05 23198900000.0 20568900.0 20506870.0 22084050.0 14642050.0 18394940.0 17597380.0 13194640.0 14651610.0 26067830.0 15575980.0 True False 19427902.113914408 19521689.183760602 23507623.19872934 16033626.029707132 19842517.125108425 17487548.22400334 14528482.978476845 14600786.984621488 21334569.18851794 15437988.935129087 1.2584477288817255 1.2645228122517351 1.5227127896974864 1.038582557422533 1.2853045308224602 1.1327607693907908 0.9410865002900303 0.9457700122713166 1.3819526156008057 1.0 23.879981493094494 -5.832998880315089 1.2106324580400394 1.0698023066441609 1.3221172505289238 0.2789677454655788 0.15865777426795644 0.5958278233755031 1.8452305776016669 0.0668641633372169 0.09031798884141676 1.4689300647900935e-06 5.832998880315089 0.25231494388476294 STFS(ph)PAPRPEMPGTVEVESTFLAR ddPTM_KYSE-520_SHP099_60min_R1 4 STFSPAPRPEMPGTVEVESTFLAR 24 1 Q92576-2;Q92576;E7EVH3;E7ER40 Q92576-2 PHF3 PHD finger protein 3 1 S(0.015)T(0.05)FS(0.935)PAPRPEMPGTVEVESTFLAR;STFS(1)PAPRPEMPGTVEVESTFLAR;ST(0.002)FS(0.998)PAPRPEMPGTVEVESTFLAR;ST(0.004)FS(0.996)PAPRPEMPGTVEVESTFLAR 255.21 1.2442e-29 3003100000.0 955443.0 1180050.0 785087.0 705872.0 809596.0 855572.0 715490.0 1002780.0 1200270.0 936730.0 True False 902442.6721615988 1123358.6267088375 835694.9642036144 772957.8626518444 873306.59922888 850232.0577896815 787818.7117094819 999301.5902306125 982331.2243444287 928431.3009649129 0.9720080217283668 1.2099534187842846 0.9001150255652538 0.8325417958749496 0.9406259766568166 0.9157727199697389 0.8485482026410643 1.0763333691917158 1.0580548321922127 1.0 19.824435636698727 -10.186802660462948 14.79271392659536 0.9999999999888775 0.9701691352030998 0.005157466685731138 0.1090719518125233 0.0 0.0 0.11260372435529259 0.027310414464451396 6.504251705995147e-11 10.186802660462948 -0.029830864785777678 STFSTNY(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 STFSTNYR 8 0 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 STFS(0.01)T(0.01)NY(0.981)R;STFS(0.003)T(0.003)NY(0.994)R 107.9 0.005981 833540000.0 1441040.0 1500320.0 1441050.0 1271290.0 1509980.0 1315760.0 1214270.0 1388820.0 1647130.0 1442410.0 True False 1361102.638557981 1428242.3751737683 1533942.3887615234 1392113.0193727252 1628806.835389039 1307547.8537836103 1337020.2617331818 1384002.507573024 1348052.7127683251 1429631.369577998 0.9520654537398368 0.9990284247857265 1.0729635774670474 0.9737566263558223 1.139319456784048 0.9146048985827552 0.9352202883795467 0.9680834773383274 0.9429372784162161 1.0 20.447211765390144 STFVLDEFK ddPTM_KYSE-520_SHP099_60min_R1 4 STFVLDEFK 9 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ;;; 195.17 2.672e-05 1851216000.0 2504325.0 2965202.0 1797186.0 1817301.0 2901856.0 3198483.0 2553799.0 2737964.0 2331106.0 2831240.0 False True 2365405.100001882 2822749.245061061 1913035.4851592688 1990016.7406485288 3130215.557897914 3178520.081179975 2811961.925596396 2728466.641929604 1907835.9128001565 2806157.416271389 0.8429338590508776 1.005912650763448 0.6817277869254985 0.7091607652191919 1.1154810987250705 1.1326948597927744 1.0020684902747614 0.972314178138654 0.6798748715013805 1.0 21.420164511034688 -3.939919965115914 11.022275654348586 0.9223601154277833 0.4781336161897384 0.020816540751603663 0.16295742766762866 228177.69944722467 1649817.4887250771 0.04382191821016189 2029437.9687489783 0.00011483652309316028 3.939919965115914 -0.4442264992380449 STFVLDEFKR ddPTM_KYSE-520_SHP099_60min_R1 4 STFVLDEFKR 10 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ;;; 185.77 9.9524e-06 16686480000.0 5178680.0 4553640.0 3198680.0 3160210.0 5627740.0 4495430.0 3717280.0 3614590.0 3491680.0 3429950.0 False True 4891408.296957358 4334876.2992470125 3404872.0308689554 3460555.4082482136 6070611.120539554 4467372.353874914 4093058.9395567067 3602051.8309416445 2857678.930089863 3399563.311460724 1.4388342998252965 1.275127391989768 1.0015615886282612 1.0179411563190692 1.7857032107841917 1.3141018256122354 1.203995503115958 1.0595630970596384 0.8406017680141323 1.0 21.696918007201287 -7.314785082259681 2.3245385293467655 0.9260862823827208 1.2957770728301852 0.3484927617423951 0.21044918109024857 0.3975903331731393 4.069730778198865 0.1594303854102034 0.06436467145557519 4.844120275083294e-08 7.314785082259681 0.36969079044746433 STGS(ph)PTQETQAPFIAK ddPTM_KYSE-520_SHP099_60min_R1 8 STGSPTQETQAPFIAK 16 0 O15231-3;O15231-2;H0Y704 O15231-3 ZNF185 Zinc finger protein 185 1 S(0.015)T(0.015)GS(0.969)PTQETQAPFIAK;S(0.011)T(0.011)GS(0.978)PTQETQAPFIAK;S(0.003)T(0.003)GS(0.993)PTQETQAPFIAK;STGS(1)PTQETQAPFIAK;S(0.001)T(0.003)GS(0.986)PT(0.011)QETQAPFIAK;S(0.003)T(0.033)GS(0.963)PTQETQAPFIAK;S(0.001)T(0.002)GS(0.997)PTQETQAPFIAK;S(0.193)T(0.193)GS(0.614)PTQETQAPFIAK 271.27 1.4107e-29 11786960000.0 8505210.0 8912610.0 6567440.0 5583880.0 6408560.0 8509410.0 6480470.0 8287710.0 9738600.0 8565730.0 True False 8033409.046584216 8484434.837499643 6990787.690675522 6114570.276345268 6912877.212281479 8456299.615784626 7135579.150892325 8258961.868376063 7970315.730127931 8489844.296237098 0.9462375005092631 0.9993628318083698 0.8234294348335701 0.7202217217405732 0.8142525317390604 0.9960488462117805 0.840484100992875 0.9728048689934905 0.9388058781785391 1.0 23.01730666431492 -7.4262554240302885 1.0290583374458198 0.9906614894712921 0.8702323216727519 0.1957115986011302 0.08357970495608842 0.9585463356188209 1.8291196402315326 0.08409001578295469 0.03144805871567808 3.747525321266366e-08 7.4262554240302885 -0.12042916779854018 STIFIS(ph)PSSVK ddPTM_KYSE-520_SHP099_60min_R1 2 STIFISPSSVK 11 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7 P28290-3 SSFA2 Sperm-specific antigen 2 1 STIFIS(0.998)PS(0.002)SVK;STIFIS(0.964)PS(0.035)SVK 252.42 8.334600000000001e-15 2610200000.0 4301800.0 4810900.0 3527000.0 3177000.0 3465100.0 4219200.0 3280400.0 4296900.0 5097700.0 4320800.0 True False 4063170.5785743 4579777.142691878 3754356.0633995296 3478941.1248001163 3737783.6562779387 4192866.4077672237 3612014.8456187905 4281995.056803998 4172086.1825594185 4282521.07353153 0.9487800547408993 1.0694114667637162 0.876669606275526 0.8123582032793709 0.8727998279750717 0.9790649796638657 0.843431890608348 0.9998771712459786 0.9742126450574492 1.0 22.030028914898978 -9.43993507542736 8.802131845586578 1.000000000000185 0.9289244318423855 0.07053975153243741 0.07517143005487098 0.0 0.0 0.07709642104615325 0.018698628666493078 3.631323369463727e-10 9.43993507542736 -0.07107556815779947 STIGVMVTAS(ph)HNPEEDNGVK ddPTM_KYSE-520_SHP099_60min_R1 10 STIGVMVTASHNPEEDNGVK 20 0 D6RC77;D6RCQ8;D6RF77;A0A494C163;A0A494C099;A0A494C0G1;H0Y987;O95394;O95394-3;O95394-4 D6RC77 PGM3 Phosphoacetylglucosamine mutase 1 STIGVMVT(0.023)AS(0.977)HNPEEDNGVK;STIGVMVT(0.004)AS(0.996)HNPEEDNGVK;STIGVMVT(0.001)AS(0.999)HNPEEDNGVK;STIGVMVT(0.001)AS(0.999)HNPEEDNGVK;STIGVMVTAS(1)HNPEEDNGVK;STIGVMVT(0.017)AS(0.983)HNPEEDNGVK;STIGVMVT(0.001)AS(0.999)HNPEEDNGVK;STIGVMVTAS(1)HNPEEDNGVK;STIGVMVTAS(1)HNPEEDNGVK;STIGVMVT(0.001)AS(0.999)HNPEEDNGVK 305.61 9.980900000000001e-46 52053240000.0 23743740.0 25783710.0 20351450.0 18098170.0 17038910.0 21673590.0 18785450.0 22431290.0 25607350.0 23986290.0 True False 22426627.41022778 24545021.86946228 21663337.030471336 19818214.635386784 18379775.27886374 21538317.0854 20684466.614324294 22353481.09049246 20957700.748761773 23773790.13165126 0.9433341207286113 1.0324404200398927 0.9112277390566274 0.833616117818832 0.7731108576748899 0.9059690089854432 0.8700533865143366 0.9402573576491756 0.8815464691454358 1.0 24.502868587190946 -2.4348399417348316 14.549013374056884 0.9039261480893214 0.9570403131682131 0.0 0.07237464286064048 0.0 0.0 0.017772398521893412 0.0 0.0036741768651944837 2.4348399417348316 0.05311416507889177 STKPVVFS(ph)PTLMLTDEEK ddPTM_KYSE-520_SHP099_60min_R1 7 STKPVVFSPTLMLTDEEK 18 1 P40818;P40818-2;A0A075B720 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 STKPVVFS(0.986)PT(0.008)LMLT(0.006)DEEK;STKPVVFS(0.989)PT(0.011)LMLTDEEK;STKPVVFS(0.923)PT(0.077)LMLTDEEK;STKPVVFS(0.978)PT(0.022)LMLTDEEK;S(0.001)T(0.001)KPVVFS(0.981)PT(0.018)LMLTDEEK;S(0.002)T(0.002)KPVVFS(0.978)PT(0.019)LMLTDEEK;S(0.005)T(0.005)KPVVFS(0.982)PT(0.008)LMLTDEEK 234.51 1.1847999999999999e-23 2827334000.0 2565220.0 2884289.0 2156224.0 2104096.0 2174601.0 3714690.0 2876965.0 3815290.0 4249090.0 4123330.0 True False 2422922.1329607107 2745723.4270339506 2295217.649120379 2304068.6512204716 2345729.726912834 3691505.2418157114 3167796.698672619 3802055.649485377 3477562.3668421875 4086800.504102195 0.5928652819066312 0.6718515925301184 0.5616172472369315 0.5637830006401643 0.5739770572501076 0.9032751263758289 0.7751287824039587 0.9303257268538064 0.8509254032222824 1.0 21.962540389691053 -6.261061740268428 24.999998961101642 0.8802762350957652 0.5938630128198958 0.8553537618344405 0.061407171877835835 12.63502782320718 836464.8865043154 0.020452470819304226 0.019258048869198085 5.481990261895061e-07 6.261061740268428 -0.2864132222758694 STLESEKPGS(ph)PEAAET(ph)SPPSNIIDHCEK ddPTM_KYSE-520_SHP099_60min_R1 3 STLESEKPGSPEAAETSPPSNIIDHCEK 28 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 STLESEKPGS(1)PEAAET(0.992)S(0.008)PPSNIIDHCEK;STLES(0.007)EKPGS(0.993)PEAAET(0.541)S(0.459)PPSNIIDHCEK;STLES(0.016)EKPGS(0.983)PEAAET(0.611)S(0.381)PPS(0.008)NIIDHCEK 234.58 7.0705e-31 3305780000.0 3036110.0 2975800.0 2599660.0 3239460.0 2962540.0 3078820.0 2877350.0 2873270.0 3601010.0 2898820.0 True False 2867690.9259647653 2832838.1012331382 2767238.243203065 3547337.304420838 3195675.0434531877 3059603.9423497063 3168220.618229856 2863303.2969962587 2947157.3580748746 2873138.710047836 0.9981038910289924 0.9859733159858382 0.963141192426798 1.2346557762823005 1.1122592279577 1.064899488371296 1.1027036763488203 0.9965767705481182 1.0257622953490493 1.0 21.454196214637154 STLESEKPGS(ph)PEAAETS(ph)PPSNIIDHCEK ddPTM_KYSE-520_SHP099_60min_R1 6 STLESEKPGSPEAAETSPPSNIIDHCEK 28 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 STLES(0.001)EKPGS(0.998)PEAAET(0.457)S(0.531)PPS(0.012)NIIDHCEK;STLES(0.001)EKPGS(0.999)PEAAET(0.468)S(0.521)PPS(0.011)NIIDHCEK;STLESEKPGS(1)PEAAET(0.223)S(0.776)PPS(0.001)NIIDHCEK;STLESEKPGS(1)PEAAET(0.144)S(0.85)PPS(0.005)NIIDHCEK;STLESEKPGS(1)PEAAET(0.22)S(0.778)PPS(0.002)NIIDHCEK;S(0.001)T(0.001)LES(0.006)EKPGS(0.991)PEAAET(0.36)S(0.63)PPS(0.009)NIIDHCEK 163.4 6.9761e-10 12277440000.0 6756270.0 6549930.0 5373860.0 7336390.0 6327170.0 6228730.0 5903750.0 6179600.0 7328580.0 6078340.0 True False 6381486.234809659 6235261.531154632 5720267.614080007 8033638.29983391 6825082.282327221 6189854.185639924 6500558.665047522 6158164.409929476 5997894.610467732 6024490.636476962 1.0592573911844376 1.0349856788558187 0.9495022831382705 1.3334966862081254 1.1328895161696912 1.0274485527725319 1.079022121088225 1.0221883942591177 0.9955853486022209 1.0 22.522407837672013 -7.183020113586682 1.3980288855911145 0.9967681071357607 1.095722887967711 0.1450703855277209 0.09403547581635861 0.9774776039897602 3.4654457086284602 0.07965709284066595 0.032335455057182536 6.561148787902002e-08 7.183020113586682 0.0989547808319503 STLESEKPGS(ph)PEAAETSPPSNIIDHCEK ddPTM_KYSE-520_SHP099_60min_R1 11 STLESEKPGSPEAAETSPPSNIIDHCEK 28 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 STLESEKPGS(1)PEAAETSPPSNIIDHCEK;STLES(0.002)EKPGS(0.997)PEAAETSPPSNIIDHCEK;S(0.006)T(0.006)LES(0.017)EKPGS(0.688)PEAAET(0.222)S(0.06)PPS(0.001)NIIDHCEK;STLESEKPGS(1)PEAAETSPPSNIIDHCEK;STLES(0.007)EKPGS(0.992)PEAAETSPPSNIIDHCEK;STLES(0.002)EKPGS(0.998)PEAAETSPPSNIIDHCEK;STLESEKPGS(1)PEAAETSPPSNIIDHCEK;STLESEKPGS(0.999)PEAAETSPPSNIIDHCEK;STLESEKPGS(1)PEAAETSPPSNIIDHCEK;S(0.004)T(0.004)LES(0.031)EKPGS(0.94)PEAAET(0.014)S(0.006)PPSNIIDHCEK;S(0.008)T(0.008)LES(0.033)EKPGS(0.951)PEAAETSPPSNIIDHCEK 220.24 1.1967000000000002e-22 28390620000.0 6690470.0 6629470.0 5730770.0 6708520.0 5477920.0 6320670.0 5733440.0 6095700.0 7554600.0 5668790.0 True False 6319336.291978715 6310980.310162652 6100184.603756198 7346095.723809907 5909001.138898745 6281220.353996508 6313032.068182108 6074555.439447076 6182875.075968258 5618568.930851877 1.1247234606803318 1.123236252475022 1.085718566209937 1.3074674021479178 1.0516914914849738 1.1179395378609622 1.1236014269606796 1.0811570551517757 1.100435920972286 1.0 22.42177128708874 -8.29249255539587 0.4863404006531039 0.9946983160302494 1.143355320446101 0.2932003978906661 0.06326097948885936 1.9399585547527596 0.9850664199502488 0.09039674348888221 0.03586289474653412 5.0992633857285e-09 8.29249255539587 0.14865700441585172 STLINSLFLTDLYS(ph)PEYPGPSHR ddPTM_KYSE-520_SHP099_60min_R1 1 STLINSLFLTDLYSPEYPGPSHR 23 0 G3V1Q4;E7ES33;E7EPK1;Q16181-2;Q16181;A0A0U1RRH9;A0A0U1RRE1;A0A5F9ZGZ7 G3V1Q4 SEPT7 Septin-7 1 STLINSLFLTDLY(0.001)S(0.998)PEY(0.001)PGPS(0.001)HR 89.634 0.00037423 0.0 59157.0 61366.0 62105.0 56125.0 47814.0 60138.0 47845.0 50988.0 69997.0 46679.0 True False 55875.44328344413 58417.8852477561 66108.38767151328 61459.10312540341 51576.68977555432 59762.656434941535 52681.63952220183 50811.134528688686 57287.30928077594 46265.46037571245 1.2077139799256498 1.2626673283558894 1.4288928962266976 1.3284014170896918 1.1147990175978029 1.2917337458575162 1.1386818394194047 1.098252003029079 1.2382306112498889 1.0 15.497647926372498 -7.551508432559975 0.3486937819313145 0.995397115649341 1.320163420067845 0.46469169360975204 0.08746717892981055 1.187014087615659 0.462694124768797 0.14273156542256324 0.11357515729883426 2.808610838321227e-08 7.551508432559975 0.32476630441850396 STLTSR ddPTM_KYSE-520_SHP099_60min_R1 4 STLTSR 6 0 H0YDZ5;M0R104;Q9Y2N7-4;Q9Y2N7-6;Q9Y2N7-7;Q9Y2N7-5;Q9Y2N7-3;Q9Y2N7-2;Q9Y2N7 H0YDZ5 HIF3A Hypoxia-inducible factor 3-alpha 0 ;;; 128.38 0.056316 6658000000.0 1567670.0 1577770.0 1060310.0 1121150.0 1692200.0 2086220.0 1607940.0 1410070.0 1684290.0 2412040.0 False True 1480708.2200273331 1501971.560918949 1128659.2791559843 1227703.7589139622 1825366.5126990608 2073199.1271359832 1770486.2671821327 1405178.7962828123 1378465.393495697 2390671.202138722 0.6193692460521859 0.6282635435501411 0.47210978998127084 0.5135393599151754 0.7635372488973251 0.8672037899989239 0.7405812499846216 0.5877758493203595 0.5766018314281387 1.0 21.188984293826945 -5.765293814596328 24.997906986104635 0.7401330584831795 0.5571585008447391 0.37726391193998376 0.12338678156120672 121.08047719251466 785266.3424571208 0.03940264711188569 0.04637922257105884 1.7167465583065579e-06 5.765293814596328 -0.1829745576384404 STLTTLPFPGAEANS(ph)PGKAEAEKPR ddPTM_KYSE-520_SHP099_60min_R1 2 STLTTLPFPGAEANSPGKAEAEKPR 25 2 Q96GV9 Q96GV9 C5orf30 UNC119-binding protein C5orf30 1 STLTTLPFPGAEANS(1)PGKAEAEKPR;STLTTLPFPGAEANS(1)PGKAEAEKPR 238.36 8.5231e-29 1209870000.0 2108920.0 2192360.0 1716220.0 1386210.0 1441250.0 1938360.0 1448160.0 1876350.0 2556280.0 2148840.0 True False 1991934.003572209 2087035.7348005478 1826850.2872490874 1517954.9816207679 1554668.1754092455 1926261.9762418657 1594554.145479607 1869841.3797933825 2092123.9905747676 2129802.9493722213 0.9352668067998261 0.9799196378311527 0.857755543904927 0.7127208562032459 0.729958692125719 0.9044320164969482 0.7486862321932722 0.8779410228277387 0.9823087113253552 1.0 21.02228852695174 -7.710307922305027 3.6161518369936863 0.9974048150480767 0.836769765348292 0.34080343894438847 0.08368384387356284 0.2836972397039684 7.122838971503263 0.07893796677168638 0.02400799185897105 1.9484626161692993e-08 7.710307922305027 -0.1606350496997847 STPCIQNGS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 1 STPCIQNGSVK 11 0 Q9NXD2 Q9NXD2 MTMR10 Myotubularin-related protein 10 1 STPCIQNGS(1)VK 63.76 0.033087 504270000.0 806590.0 692180.0 743680.0 611700.0 628690.0 550190.0 584090.0 594380.0 789560.0 617580.0 True False 761846.8448026978 658926.6338166381 791618.8027300711 669835.7840856881 678164.3262432178 546756.0601273824 643135.5173690647 592318.2345093346 646195.8071878722 612108.7216699694 1.2446266779604271 1.0764862686794252 1.2932650274453827 1.0943085114981312 1.1079148233552922 0.8932335723557568 1.0506883738144546 0.9676683463900956 1.0556879591993162 1.0 19.223428399059593 -5.811243131484863 2.1218181200465596 0.9965476215517683 1.1886903699302052 0.589808118036151 0.07271562192300363 0.2109241157099146 1.9504932000799775 0.023330559630644118 0.0290530316009434 1.5443896004087298e-06 5.811243131484863 0.1921427483784368 STPES(ph)GDS(ph)DKESVGSSSTSNEGGR ddPTM_KYSE-520_SHP099_60min_R1 2 STPESGDSDKESVGSSSTSNEGGR 24 1 Q6GQQ9-2;Q6GQQ9 Q6GQQ9-2 OTUD7B OTU domain-containing protein 7B 2 S(0.002)T(0.003)PES(0.995)GDS(1)DKESVGSSSTSNEGGR;S(0.005)T(0.005)PES(0.991)GDS(0.998)DKES(0.001)VGSSSTSNEGGR 115.76 0.00016604 198923000.0 297850.0 267750.0 256350.0 250624.0 284300.0 266853.0 247461.0 266960.0 318580.0 242690.0 True False 281327.6667507452 254886.88809905626 272874.7311745024 274443.2296071471 306672.7925542743 265187.47144290555 272476.77286662295 266033.97806893254 260733.9027482553 240539.955409963 1.1695673023272408 1.0596446967184356 1.1344257992790836 1.140946538962316 1.2749349355769113 1.1024674507440342 1.1327713618397768 1.105986644154477 1.0839525695590773 1.0 17.875917030320064 -8.028055687591598 0.9985928030233808 1.0011142666299762 1.1463896465836418 0.4321962477420157 0.05172265851562946 0.6053955129242596 1.3545131051541102 0.05144985100851034 0.01720687808716409 9.374417953526346e-09 8.028055687591598 0.14527537995366568 STPESGDS(ph)DKESVGSSSTSNEGGR ddPTM_KYSE-520_SHP099_60min_R1 3 STPESGDSDKESVGSSSTSNEGGR 24 1 Q6GQQ9-2;Q6GQQ9 Q6GQQ9-2 OTUD7B OTU domain-containing protein 7B 1 S(0.001)T(0.001)PES(0.023)GDS(0.973)DKES(0.001)VGSS(0.001)S(0.001)TSNEGGR;STPES(0.006)GDS(0.994)DKESVGSSSTSNEGGR;STPES(0.001)GDS(0.999)DKESVGSSSTSNEGGR 167.87 1.5663999999999996e-10 602025000.0 537915.0 485214.0 489673.0 470426.0 476486.0 465293.0 479043.0 532362.0 637755.0 463726.0 True False 508075.7826430323 461903.59111893724 521238.10508450127 515135.1456012652 513982.7373655158 462388.93379532464 527469.3414491413 530515.3604762248 521954.76849524025 459617.7484133684 1.1054311640421728 1.0049733560408833 1.1340687057535321 1.1207903684736862 1.1182830496424887 1.0060293263076165 1.1476261377416368 1.1542534253901198 1.1356279654061738 1.0 18.81007498402562 STPFIVPS(ph)SPTEQEGR ddPTM_KYSE-520_SHP099_60min_R1 6 STPFIVPSSPTEQEGR 16 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 STPFIVPS(0.493)S(0.493)PT(0.015)EQEGR;STPFIVPS(0.494)S(0.494)PT(0.012)EQEGR;STPFIVPS(0.841)S(0.158)PT(0.001)EQEGR;STPFIVPS(0.549)S(0.358)PT(0.093)EQEGR;STPFIVPS(0.649)S(0.35)PT(0.001)EQEGR;STPFIVPS(0.541)S(0.452)PT(0.007)EQEGR 283.07 3.1814000000000003e-37 20032800000.0 8066380.0 8467580.0 6793180.0 5574060.0 6008300.0 8378830.0 6285790.0 8070160.0 9587710.0 8269450.0 True False 7618921.8214701265 8060784.746703308 7231079.2522722995 6103816.986497744 6481119.027449348 8326534.614000822 6921218.996598616 8042166.498549504 7846823.5505005745 8196189.106534756 0.9295688181957175 0.9834795954471706 0.8822489523218807 0.7447140258917672 0.7907478638190527 1.0159031844887696 0.84444354646239 0.9812080216813872 0.9573746345413584 1.0 22.966521840631913 -7.359042777398764 1.149516825101681 0.9944315437590777 0.8789262046140468 0.2179836492375089 0.07856634972313342 0.8478832899758586 1.9714383478522493 0.07583288532270689 0.028162681360611896 4.3747901196545857e-08 7.359042777398764 -0.11550533914503092 STPFIVPSS(ph)PTEQEGR ddPTM_KYSE-520_SHP099_60min_R1 3 STPFIVPSSPTEQEGR 16 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 STPFIVPS(0.127)S(0.57)PT(0.303)EQEGR;STPFIVPS(0.001)S(0.999)PTEQEGR;STPFIVPS(0.432)S(0.559)PT(0.009)EQEGR 378.74 5.175499999999999e-73 20214300000.0 4397100.0 4810200.0 3633200.0 2817960.0 3232900.0 4462900.0 3336800.0 4018000.0 5114400.0 4442800.0 True False 4153184.097598466 4579110.7717426 3867401.8853255385 3085778.07114943 3487310.8373152143 4435045.385671296 3674116.308029743 4004062.495808248 4185753.883532158 4403440.248446095 0.9431680375506537 1.0398939268810328 0.8782682782377447 0.7007652873769213 0.7919514380933934 1.0071773739262964 0.8343740577214103 0.9093032424412296 0.9505644785368088 1.0 22.070199658999517 -9.810692376537746 11.799247987229638 0.9999999609635113 0.8920038809120497 0.09692973862804777 0.09569500294734477 0.0 0.0 0.10015233240306588 0.024290508538224172 1.546349376118954e-10 9.810692376537746 -0.10799608005146155 STPHRT(ph)PIITPNTK ddPTM_KYSE-520_SHP099_60min_R1 1 STPHRTPIITPNTK 14 1 Q9NQW6;Q9NQW6-2;H7C3S1 Q9NQW6 ANLN Actin-binding protein anillin 1 S(0.003)T(0.003)PHRT(0.994)PIITPNTK 85.146 0.0086664 1075900000.0 951010.0 847560.0 886200.0 825970.0 662420.0 752920.0 728290.0 898350.0 1050000.0 811530.0 True False 898255.5795085654 806841.945386504 943325.8699701331 904469.9404630653 714548.6853457706 748220.7469985071 801912.6606254432 895233.8335264652 859346.4683459977 804340.4755607861 1.1167603854354111 1.0031099638793808 1.17279423158762 1.1244864183074574 0.888365943349534 0.9302288890495628 0.9969816079022379 1.1130035858288847 1.0683864538171617 1.0 19.617446794778786 -5.709777798074742 24.999445271506808 1.00155474552189 1.1019542488992504 0.34330257205933346 0.07094029069139975 139.47387308426676 67491.61254639043 0.023179387457710022 0.02992442924657586 1.950842471241812e-06 5.709777798074742 0.10039950337736037 STPLASPS(ph)PSPGRSPQR ddPTM_KYSE-520_SHP099_60min_R1 1 STPLASPSPSPGRSPQR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 STPLAS(0.084)PS(0.475)PS(0.032)PGRS(0.409)PQR 165.45 5.8190999999999995e-08 1024500000.0 468210.0 544180.0 367830.0 296480.0 372310.0 417960.0 372770.0 389160.0 524900.0 456190.0 True False 442237.45794650546 518036.7759691676 391540.91034880857 324657.37006003794 401608.67884587403 415351.3566056097 410453.22948460985 387810.09479062696 429591.39165220445 452148.5115104498 0.9780800924660009 1.1457226171963082 0.8659564288751606 0.7180325972444004 0.8882229369820501 0.9186171048492113 0.9077840997716603 0.8577051232461352 0.9501112592787468 1.0 18.78643718873363 -4.7756355384852665 24.997953473868066 0.8789160618352452 1.0619013510445023 0.43078933273209696 0.07923358519056 175.89359220143143 309731.3399384111 0.020747593785112418 0.04351861025937531 1.6763490841678475e-05 4.7756355384852665 0.18298528920925716 STPLASPSPS(ph)PGRSPQR ddPTM_KYSE-520_SHP099_60min_R1 1 STPLASPSPSPGRSPQR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 STPLAS(0.057)PS(0.204)PS(0.472)PGRS(0.267)PQR 73.744 0.022368 292550000.0 945190.0 832210.0 755750.0 705010.0 772790.0 782310.0 675600.0 701800.0 989820.0 804320.0 True False 892758.4265104475 792229.3824273231 804466.8542427542 772013.9384310144 833604.1764263725 777427.3131068402 743896.2412205983 699365.619601352 810093.6393316527 797194.3505514906 1.1198755057569671 0.9937719476803458 1.0091226232175787 0.9684137097772249 1.0456724584785304 0.9752042429415415 0.9331428913237767 0.8772837127076206 1.0161808582452179 1.0 19.604571960754992 -6.475998661449974 4.550321930691737 0.946956059999406 1.0209324589917081 0.2894290450490187 0.05169269735435694 0.26370649383067496 11.984233698679532 0.01887932738059703 0.015954601944236185 3.34196070058702e-07 6.475998661449974 0.07397639899230213 STPLASPSPSPGRS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 3 STPLASPSPSPGRSPQR 17 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 STPLAS(0.001)PS(0.025)PS(0.243)PGRS(0.732)PQR;STPLAS(0.017)PS(0.377)PS(0.139)PGRS(0.466)PQR;STPLASPSPSPGRS(1)PQR 157.11 1.5905e-06 4426200000.0 2712270.0 2957890.0 2716740.0 1875960.0 2107650.0 2729590.0 2268010.0 2528110.0 3319760.0 2797010.0 True False 2561814.9763238 2815788.524516593 2891865.4073376926 2054250.6743720595 2273510.064111911 2712553.616320001 2497282.5844445378 2519340.5764753073 2716975.2683393424 2772230.6674408494 0.9240987795177622 1.0157122051881613 1.0431546845296544 0.7410100099168212 0.8201013324084875 0.9784732735909243 0.9008206329200857 0.9087773993933216 0.9800682534283789 1.0 21.402615873310047 -9.722602000629312 14.104656913765268 0.9999998238605373 0.9219029191361249 0.0661923434846291 0.08590282615063369 0.0 0.0 0.0887026871810917 0.0215135616778684 1.894078609096301e-10 9.722602000629312 -0.07809690472441244 STPQPPS(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 4 STPQPPSGK 9 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 STPQPPS(1)GK;STPQPPS(1)GK;STPQPPS(1)GK;STPQPPS(1)GK 123.92 0.00069333 3167360000.0 5458680.0 4400950.0 4285640.0 3883700.0 3886180.0 4131570.0 4063720.0 4407520.0 5282360.0 4273850.0 True False 5155876.138791204 4189521.7560393787 4561899.211666443 4252805.680323014 4192000.2566604638 4105783.3391019204 4474520.475685271 4392231.341842907 4323216.581459202 4235987.014004989 1.2171605157770515 0.9890308308755464 1.07693890386914 1.0039704244282193 0.9896159366874601 0.9692624943200747 1.0563111881343463 1.0368849874471626 1.0205925011492754 1.0 22.0142667358831 -4.256432337163091 24.93049202028617 1.0175251777900807 1.2171606015800998 0.7876030785260515 0.03135213245394881 233.3760369604653 1161959.897807535 0.008008362210155426 0.06457948296396483 5.540738616114416e-05 4.256432337163091 0.19963542379001908 STPVPEVVQELPLTS(ph)PVDDFRQPR ddPTM_KYSE-520_SHP099_60min_R1 2 STPVPEVVQELPLTSPVDDFRQPR 24 1 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625;Q16625-5 A0A0G2JMZ8 OCLN Occludin 1 STPVPEVVQELPLT(0.14)S(0.86)PVDDFRQPR;STPVPEVVQELPLT(0.111)S(0.889)PVDDFRQPR 136.16 1.0443000000000001e-06 101732000.0 60880.0 72540.0 55292.0 64773.0 54620.0 79336.0 52375.0 79123.0 125697.0 77593.0 True False 57502.86503872881 69055.06951524013 58856.21079032796 70929.00644528733 58918.28325471154 78840.83459580499 57669.57613074138 78848.54078044699 102873.59336351132 76905.58638644051 0.7477072569186903 0.8979200700485845 0.7653047529549181 0.9222867905704321 0.7661118785136736 1.025163948424242 0.7498749940083586 1.025264151608485 1.3376608670088668 1.0 16.23080077824747 -7.505335151227616 5.94250558669883 1.175311728602372 0.8480779901092977 0.5802242218234495 0.11399629730497464 0.09855042825030702 13.177416166122464 0.06383475367861209 0.0271757173910792 3.1236678578392835e-08 7.505335151227616 -0.32723373849307424 STQIENQHQGAQDTSDLMS(ph)PSKR ddPTM_KYSE-520_SHP099_60min_R1 5 STQIENQHQGAQDTSDLMSPSKR 23 1 H0YBW3;Q9NVR2 H0YBW3 INTS10 Integrator complex subunit 10 1 STQIENQHQGAQDT(0.002)S(0.002)DLMS(0.778)PS(0.218)KR;STQIENQHQGAQDTSDLMS(0.943)PS(0.057)KR;STQIENQHQGAQDTS(0.003)DLMS(0.93)PS(0.066)KR;STQIENQHQGAQDT(0.011)S(0.061)DLMS(0.843)PS(0.085)KR;STQIENQHQGAQDTSDLMS(0.889)PS(0.111)KR 293.68 1.4591000000000002e-48 4552870000.0 1550423.0 1418008.0 1358978.0 1428943.0 1277851.0 1348306.0 1300663.0 1290879.0 1656330.0 1334787.0 True False 1464417.945498374 1349884.7672065992 1446579.8963216797 1564749.313092622 1378410.6037223784 1339890.7221252832 1432146.7092876085 1286401.2420424228 1355582.2246814538 1322961.8256285707 1.1069238107475958 1.0203505052500186 1.0934403913237445 1.1827622557054298 1.0419126062594153 1.0127962093605152 1.0825306381060251 0.9723645967117931 1.0246570977491238 1.0 20.335340002240137 -5.982828922745138 24.995580394096685 1.0214805227373962 1.0968060544844804 0.4303201479902884 0.04475938759418747 261.56328889413135 380750.41139214317 0.014354520961487028 0.01627290092696333 1.0403298918093738e-06 5.982828922745138 0.07532553174708423 STQKS(ph)PATAPK ddPTM_KYSE-520_SHP099_60min_R1 5 STQKSPATAPK 11 1 Q07960;H0YE29 Q07960 ARHGAP1 Rho GTPase-activating protein 1 1 S(0.183)T(0.183)QKS(0.631)PAT(0.003)APK;S(0.001)T(0.004)QKS(0.983)PAT(0.013)APK;S(0.022)T(0.013)QKS(0.648)PAT(0.317)APK;ST(0.001)QKS(0.993)PAT(0.006)APK;S(0.011)T(0.08)QKS(0.908)PATAPK 143.18 0.00013098 15483180000.0 21325900.0 19371330.0 16539280.0 13858120.0 15080580.0 18226220.0 15439890.0 16050420.0 21642990.0 17891260.0 True False 20142909.81487232 18440702.22984087 17605428.45258367 15175191.558204275 16267335.849237235 18112463.40030699 17000704.760005217 15994744.839216193 17713168.591378823 17732757.355589658 1.1359152674878812 1.039923000132185 0.9928195654825305 0.8557716802807773 0.917360764771842 1.0214126904859295 0.9587174977413376 0.9019885919870428 0.9988953345597626 1.0 24.079913549796007 -4.536484178479681 1.9927404779986142 0.9481631728182938 1.1420969165725572 0.5835391863075445 0.04845613905260234 0.31303841559332696 1.9894115269037675 0.013760255650705051 0.09066403544553324 2.9074738779420486e-05 4.536484178479681 0.19393374375426342 STS(ph)EGAWPQLPSGLSMMR ddPTM_KYSE-520_SHP099_60min_R1 9 STSEGAWPQLPSGLSMMR 18 0 G3V1A6;P57764 G3V1A6 GSDMD Gasdermin-D 1 S(0.031)T(0.031)S(0.939)EGAWPQLPSGLSMMR;S(0.095)T(0.095)S(0.811)EGAWPQLPSGLSMMR;STS(1)EGAWPQLPSGLSMMR;S(0.004)T(0.024)S(0.972)EGAWPQLPSGLSMMR;S(0.078)T(0.078)S(0.844)EGAWPQLPSGLSMMR;S(0.135)T(0.135)S(0.729)EGAWPQLPSGLSMMR;S(0.188)T(0.188)S(0.625)EGAWPQLPSGLSMMR;S(0.028)T(0.028)S(0.944)EGAWPQLPSGLSMMR;S(0.092)T(0.092)S(0.817)EGAWPQLPSGLSMMR 260.24 9.100399999999999e-30 5565410000.0 8341060.0 7639210.0 6462590.0 5013150.0 4664260.0 6269560.0 4982820.0 5045940.0 6271350.0 6066210.0 True False 7878364.774309128 7272210.884912017 6879178.891909605 5489598.268741492 5031310.72599086 6230429.350464807 5486532.073236865 5028436.811871254 5132630.927868258 6012468.098839958 1.3103378919930027 1.2095217413818982 1.144152248098725 0.9130357414787201 0.8368128767222229 1.0362515439652649 0.9125257686266033 0.8363348843117251 0.8536645589618255 1.0 22.51952590352619 -5.0680548013425835 2.0942462980315453 0.9052211906914183 1.2704394778375323 0.8278402158603655 0.06587599007918221 0.12863941669626433 1.101101562289029 0.020020123997715137 0.0479166463934954 8.549588233085824e-06 5.0680548013425835 0.36521828714611404 STS(ph)FGVPNANSIK ddPTM_KYSE-520_SHP099_60min_R1 2 STSFGVPNANSIK 13 0 A0A087WVP4;A0A087X1R1;P53814-5;P53814;P53814-6;H7BZZ8;A0A096LNK9;B5MCI0;P53814-2 A0A087WVP4 SMTN Smoothelin 1 S(0.021)T(0.021)S(0.958)FGVPNANSIK;S(0.032)T(0.032)S(0.937)FGVPNANSIK 99.48100000000001 0.0014957 2297160000.0 3489900.0 3875100.0 3233800.0 2991300.0 2887000.0 3602600.0 3299700.0 3847300.0 4191800.0 3633200.0 True False 3296308.290056826 3688934.3793563186 3442255.9222629433 3275592.2526328587 3114190.4752169894 3580114.837083386 3633265.8779686326 3833954.614266569 3430674.786678811 3601012.6745868297 0.9153836956252966 1.024415827633702 0.9559133036536447 0.9096308590495842 0.8648096401311065 0.994196677603796 1.0089567036543419 1.0646878977471153 0.9526972262246861 1.0 21.779971246756112 -6.500368103378575 23.894528195406807 1.0104905022984223 0.9379713045467315 0.3702976975612331 0.04566224324505706 504.23547240497 535235.5685732852 0.017005879018169783 0.01487144924210273 3.159598482876428e-07 6.500368103378575 -0.0725191977516908 STS(ph)FRGGMGSGGLATGIAGGLAGMGGIQNEK ddPTM_KYSE-520_SHP099_60min_R1 3 STSFRGGMGSGGLATGIAGGLAGMGGIQNEK 31 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 1 S(0.169)T(0.169)S(0.657)FRGGMGS(0.005)GGLATGIAGGLAGMGGIQNEK;S(0.159)T(0.159)S(0.682)FRGGMGS(0.001)GGLATGIAGGLAGMGGIQNEK;S(0.133)T(0.133)S(0.732)FRGGMGS(0.003)GGLATGIAGGLAGMGGIQNEK 213.26 1.8127000000000001e-22 3242920000.0 1412500.0 2115870.0 1852800.0 1045050.0 1583170.0 1551240.0 962520.0 1157580.0 2318840.0 1236830.0 True False 1334145.8092510593 2014220.429214383 1972234.4525848157 1144371.2377942607 1707756.4719949015 1541558.1357567369 1059820.914889952 1153564.6251612024 1897797.1091994625 1225872.6484391799 1.0883233351765669 1.643091092520053 1.6088412243277697 0.9335155974409827 1.3930945226400733 1.257518990834405 0.8645440586665749 0.9410150610913439 1.548119302291146 1.0 20.225377679667375 -5.255024897550771 24.99625028863447 1.1362331337977112 1.4663858056654808 0.24890059225361694 0.2482673491888342 710.4372341936692 2768457.243704781 0.0679091345328994 0.11406693027870544 5.558723888992406e-06 5.255024897550771 0.33015267186776964 STS(ph)GPRPGCQPSSPCVPK ddPTM_KYSE-520_SHP099_60min_R1 3 STSGPRPGCQPSSPCVPK 18 1 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 S(0.249)T(0.249)S(0.502)GPRPGCQPS(0.001)SPCVPK;S(0.166)T(0.166)S(0.645)GPRPGCQPS(0.011)S(0.011)PCVPK;S(0.035)T(0.172)S(0.791)GPRPGCQPS(0.001)SPCVPK 112.82 0.00011289 2098890000.0 1749060.0 1266460.0 1149400.0 1104470.0 1101080.0 1413080.0 1352960.0 1320430.0 1534810.0 1199370.0 True False 1652036.1551353326 1205617.3606047847 1223492.163105024 1209438.4967289867 1187728.7317117858 1404260.4435645875 1489730.4004171414 1315849.7365206794 1256127.1934115444 1188744.514895739 1.389731884718919 1.014193836856968 1.029230543463187 1.017408266935358 0.9991454991621624 1.181297096195435 1.2531964452831152 1.1069239184973976 1.0566839027826895 1.0 20.181007253542738 -13.999849814214555 0.010393863611563308 2.0099731518581724e-05 2.0220243984355295 0.08014208018199631 0.11943783384407886 54036.02954278084 42.55956829102874 4840.333666646514 3534.393443402814 1.0003458753518367e-14 13.999849814214555 2.0220042987040108 STS(ph)GSPRPAGAKPK ddPTM_KYSE-520_SHP099_60min_R1 1 STSGSPRPAGAKPK 14 2 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 S(0.006)T(0.054)S(0.496)GS(0.445)PRPAGAKPK 61.692 0.025225 1751900000.0 734540.0 705780.0 614820.0 630750.0 639370.0 600920.0 602180.0 654090.0 743590.0 586020.0 True False 693793.6019308119 671873.2694026222 654452.2809467819 690696.290358098 689684.7814823306 597169.4353800442 663054.231110451 651821.1144557529 608572.800378476 580828.3187166613 1.194489971604255 1.1567501923582593 1.1267568399433288 1.1891573948807965 1.1874159011499086 1.0281341596764575 1.1415666380996499 1.1222268154830157 1.0477670953150426 1.0 19.147752269154964 -7.720032146194902 0.26063414805448454 0.9716330172448807 1.1982901653828975 0.6095713152392053 0.041820784761770306 1.5026319458238702 0.3955604131610138 0.1314095790842293 0.1012950631389161 1.90531968222077e-08 7.720032146194902 0.22665714813801674 STS(ph)LKER ddPTM_KYSE-520_SHP099_60min_R1 1 STSLKER 7 1 F8VW41;Q86VP3-4;Q86VP3;Q86VP3-3;Q86VP3-2 F8VW41 PACS2 Phosphofurin acidic cluster sorting protein 2 1 S(0.011)T(0.012)S(0.976)LKER 70.363 0.043503 2073000000.0 3457300.0 3896100.0 4237100.0 3025600.0 3401000.0 3554100.0 3054300.0 3173300.0 4097500.0 3529300.0 True False 3265516.6770433183 3708925.5078346734 4510230.245599702 3313152.1143201874 3668639.350957045 3531917.5435735476 3363058.451095434 3162292.5629537846 3353497.2895692643 3498033.147753851 0.9335293689655755 1.0602888398059465 1.289361779917895 0.9471471465179285 1.048772037312666 1.009686699464656 0.9614141173175884 0.9040201820226743 0.9586808208843316 1.0 21.73811252978829 -6.282476361787892 1.2272034994302246 0.9471574958599409 1.0756617016790315 0.20187890580515688 0.0929209649720714 0.6905686143326618 2.1297213882644854 0.04828672727995837 0.04269840296409073 5.218235057949575e-07 6.282476361787892 0.1285042058190906 STS(ph)LNERPK ddPTM_KYSE-520_SHP099_60min_R1 3 STSLNERPK 9 1 P49815;A0A2R8Y5F1;A0A2R8YGD6;A0A2R8Y7C8;A0A2R8YDR3;A0A2R8Y7X5;A0A2R8YDZ2;H3BMQ0;X5D2U8;A0A2R8YGU4;A0A2R8Y6C9;P49815-5;P49815-3;P49815-2;P49815-6;P49815-7;P49815-4 P49815 TSC2 Tuberin 1 S(0.008)T(0.065)S(0.928)LNERPK;S(0.072)T(0.005)S(0.923)LNERPK;S(0.005)T(0.005)S(0.99)LNERPK 133.79 0.00076102 1621760000.0 2060180.0 1958280.0 1821780.0 1894100.0 1975350.0 1932560.0 2021480.0 1926550.0 2324520.0 1912430.0 True False 1945897.7085329879 1864201.2893617917 1939214.853751062 2074114.6945180711 2130798.80679594 1920498.1761932652 2225830.926143603 1919867.2477101525 1902445.7643806082 1895487.3580480255 1.0265949283549298 0.9834944461362949 1.0230692626449733 1.0942382104062125 1.1241429797718294 1.0131949274359686 1.1742789613937417 1.0128620692502184 1.0036710381121974 1.0 20.854137403810974 -5.06819180375661 5.789882289031707 1.0661027434277908 1.0044744922920759 0.14183140713220066 0.05541087862627434 0.35760574655614347 22.63424994895804 0.014998661922071648 0.02683353031191005 8.546891607768516e-06 5.06819180375661 -0.06162825113571491 STS(ph)LSALVR ddPTM_KYSE-520_SHP099_60min_R1 7 STSLSALVR 9 0 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5;A0A0A0MRX3 Q5VZ89-5 DENND4C DENN domain-containing protein 4C 1 S(0.091)T(0.039)S(0.87)LS(0.001)ALVR;S(0.012)T(0.047)S(0.942)LSALVR;ST(0.001)S(0.999)LSALVR;ST(0.001)S(0.998)LSALVR;S(0.001)T(0.004)S(0.995)LSALVR;S(0.002)T(0.013)S(0.93)LS(0.055)ALVR;ST(0.001)S(0.997)LS(0.002)ALVR 223.31 3.5764e-09 2691630000.0 4484470.0 3950820.0 3639270.0 3131710.0 3413240.0 4450280.0 3675500.0 4371800.0 5113740.0 4405300.0 True False 4235707.509530688 3761016.67689828 3873863.1672378797 3429346.7768170577 3681842.569320974 4422504.151772453 4047055.409423193 4356635.246185788 4185213.7228949154 4366272.469271533 0.9700969280639903 0.8613792893977975 0.8872243302498695 0.785417493056545 0.8432461774276883 1.0128786471519269 0.92689025659876 0.9977928030938131 0.9585324214989209 1.0 22.057970731215303 -6.256699573155731 24.994725491747904 0.975810341273234 0.8653396510202069 0.5607013814136939 0.04845463451389051 314.44423465254545 1658182.0026840332 0.016593344015174486 0.016071849098386607 5.537330262148199e-07 6.256699573155731 -0.11047069025302703 STS(ph)PAGQHHS(ph)PISSR ddPTM_KYSE-520_SHP099_60min_R1 1 STSPAGQHHSPISSR 15 0 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 S(0.273)T(0.329)S(0.398)PAGQHHS(0.987)PIS(0.01)S(0.003)R 81.574 0.0027745 0.0 91828.0 108490.0 104670.0 158460.0 106790.0 103230.0 99023.0 100870.0 134990.0 90853.0 True False 86734.11778542034 103277.97755319015 111417.19567792141 173519.9907572636 115193.76544801607 102585.70327877578 109033.21121134899 100520.10551323497 110479.21882097723 90048.11310256446 0.9631975040568647 1.1469199519545394 1.2373073886736266 1.9269697584848333 1.2792468545877338 1.1392321254075701 1.2108328254159038 1.1162933019900478 1.2268909920982112 1.0 16.458408425296838 -6.181219011342894 5.455695986205714 1.1507372006483514 1.3342757663151998 0.11240526724256872 0.23843226028714418 0.561425018376911 28.70733717109809 0.08595098988982851 0.08574860487208155 6.588415627587345e-07 6.181219011342894 0.18353856566684845 STS(ph)PAS(ph)EKADPGAVK ddPTM_KYSE-520_SHP099_60min_R1 2 STSPASEKADPGAVK 15 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 2 S(0.244)T(0.325)S(0.433)PAS(0.997)EKADPGAVK;S(0.052)T(0.068)S(0.882)PAS(0.999)EKADPGAVK 131.56 0.00092461 0.0 739070.0 718460.0 606150.0 585560.0 660640.0 631630.0 617570.0 679710.0 817400.0 679730.0 True False 698072.3138004809 683944.1031695533 645223.3988742916 641211.4463449672 712628.6094725857 627687.762878748 680000.0025023756 677352.2446555066 668980.7649771599 673708.1210219385 1.036164315106644 1.0151934967506224 0.9577194911879067 0.9517644605089849 1.0577705496433816 0.9316909553155113 1.009339180105018 1.0054090540396639 0.9929830799165553 1.0 19.36176416442174 STS(ph)PFGIPEEASEMLEAKPK ddPTM_KYSE-520_SHP099_60min_R1 2 STSPFGIPEEASEMLEAKPK 20 1 Q96D09 Q96D09 GPRASP2 G-protein coupled receptor-associated sorting protein 2 1 S(0.172)T(0.172)S(0.657)PFGIPEEASEMLEAKPK;S(0.112)T(0.441)S(0.447)PFGIPEEASEMLEAKPK 73.953 0.0049305 165390000.0 505100.0 467160.0 404870.0 380270.0 386800.0 461360.0 391050.0 464730.0 547990.0 425920.0 True False 477081.0961081126 444716.9323785438 430968.5680149044 416410.7464676559 417238.9594090515 458480.4811071971 430581.1502802176 463117.9600987974 448488.8297037367 422146.6801607459 1.1301311097044484 1.0534654263044387 1.0208976838353894 0.9864124628650262 0.9883743708470581 1.086069138178739 1.0199799513199062 1.097054606523141 1.0624004659540616 1.0 18.687384842971518 -6.289467268647802 24.9751387896418 1.057096682599629 1.0332565737613986 0.028776747515015244 0.046104720496561086 2516.5191412047325 2242412.7790287384 0.016963318115550765 0.014965288157558359 5.134908761696109e-07 6.289467268647802 -0.02384010883823051 STS(ph)PIIGS(ph)PPVR ddPTM_KYSE-520_SHP099_60min_R1 4 STSPIIGSPPVR 12 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 2 S(0.002)T(0.173)S(0.826)PIIGS(1)PPVR;ST(0.007)S(0.993)PIIGS(1)PPVR;ST(0.002)S(0.998)PIIGS(1)PPVR;ST(0.002)S(0.998)PIIGS(1)PPVR 183.28 1.2359e-07 3142960000.0 3408330.0 3466000.0 3537810.0 3340440.0 3678830.0 3310560.0 3281580.0 3431530.0 3992430.0 3372930.0 True False 3219263.140562593 3299488.1574279317 3765862.893296141 3657914.413260096 3968332.991320582 3289897.567050122 3613314.131534479 3419626.8233551206 3267505.352970108 3343048.4642998325 0.9629723215026244 0.9869698847213619 1.1264757102720804 1.0941852779948285 1.1870402220303167 0.9841010688844912 1.0808440769318164 1.0229067451079643 0.9774029266591724 1.0 21.672732839235582 -9.193855566863622 8.552753931058959 1.0000115954805133 1.0515064025959773 0.03513355299208254 0.07037612464476582 0.0 0.0 0.07120034401175745 0.017268619937693526 6.399476272145875e-10 9.193855566863622 0.05149480711546395 STS(ph)PIIGSPPVR ddPTM_KYSE-520_SHP099_60min_R1 6 STSPIIGSPPVR 12 0 Q86TB9;Q86TB9-4;Q86TB9-2 Q86TB9 PATL1 Protein PAT1 homolog 1 1 S(0.019)T(0.073)S(0.908)PIIGSPPVR;S(0.01)T(0.031)S(0.959)PIIGSPPVR;S(0.119)T(0.119)S(0.763)PIIGSPPVR;S(0.001)T(0.021)S(0.978)PIIGSPPVR;S(0.086)T(0.045)S(0.869)PIIGSPPVR;S(0.165)T(0.165)S(0.671)PIIGSPPVR 179.67 6.8152e-07 13953830000.0 12558940.0 10908730.0 8373370.0 6965680.0 7340660.0 10309970.0 8645660.0 11083580.0 11381590.0 10662170.0 True False 11862270.562573804 10384658.236462455 8913130.828065703 7627696.132891935 7918328.179357941 10245621.652940819 9519647.68631036 11045133.647907024 9314980.162535345 10567711.468842737 1.122501366312647 0.9826780629921638 0.8434305624585503 0.7217926185230376 0.7492945092893487 0.9695213275976023 0.9008239593196283 1.0451774426726064 0.8814567080109182 1.0 23.333159646416835 -9.802328626740428 12.99456648048916 0.9999999963169877 0.9077278868932008 0.04513897752012497 0.11789869812909527 0.0 0.0 0.12414122459475287 0.030108669499864186 1.5764179569384258e-10 9.802328626740428 -0.09227210942378683 STS(ph)PSAAGGQQK ddPTM_KYSE-520_SHP099_60min_R1 4 STSPSAAGGQQK 12 0 Q2TB10 Q2TB10 ZNF800 Zinc finger protein 800 1 S(0.077)T(0.077)S(0.844)PS(0.001)AAGGQQK;S(0.024)T(0.015)S(0.95)PS(0.01)AAGGQQK;ST(0.001)S(0.998)PSAAGGQQK;ST(0.002)S(0.994)PS(0.004)AAGGQQK 171.36 2.0174e-06 2564230000.0 8651590.0 8152100.0 6617300.0 6243290.0 5979880.0 9034400.0 7640190.0 8541900.0 9349320.0 9271920.0 True False 8171669.05618291 7760460.879448426 7043861.746054359 6836650.404486414 6450462.535137021 8978012.958459472 8412534.966268804 8512270.142594457 7651719.165177709 9189778.00224461 0.8892128900379284 0.8444666321159148 0.7664887818110394 0.7439407570908195 0.7019171228686363 0.9769564570837931 0.9154230890250054 0.926275927505031 0.8326337331879803 1.0 23.131598580030083 -6.270394479182592 24.99514857529912 0.9247229158921351 0.7884985944584326 0.5522196467107272 0.06340842530898659 560.3404400807665 1563997.5647175948 0.023424560579167687 0.020960033113082997 5.36544220108108e-07 6.270394479182592 -0.13622432143370244 STS(ph)PTFNK ddPTM_KYSE-520_SHP099_60min_R1 7 STSPTFNK 8 0 Q9BX63 Q9BX63 BRIP1 Fanconi anemia group J protein 1 ST(0.001)S(0.998)PTFNK;S(0.003)T(0.001)S(0.995)PTFNK;S(0.002)T(0.103)S(0.893)PT(0.003)FNK;ST(0.001)S(0.999)PTFNK;STS(1)PTFNK;ST(0.008)S(0.989)PT(0.003)FNK;STS(1)PTFNK 187.55 6.7382e-06 9301600000.0 25509200.0 23992300.0 24376500.0 20020500.0 22624000.0 23649400.0 21766600.0 22161300.0 27860200.0 22979100.0 True False 24094153.8246705 22839673.894823488 25947848.193779 21923242.30061721 24404380.08704858 23501795.32230052 23966980.349544525 22084427.622786324 22801489.978488702 22775523.051469255 1.0578968382074625 1.0028166573039514 1.1392865988254481 0.9625790920838122 1.0715178760943647 1.0318882806418979 1.0523130597432495 0.9696562214127351 1.0011401242887272 1.0 24.440980850844607 -7.253833562455197 24.593484406479256 0.9890486289865644 1.044730144572825 0.24974086289838504 0.04382011021904732 601.3124197926201 1944356.0229908703 0.019764252220995957 0.011118238487599418 5.573993238315015e-08 7.253833562455197 0.055681515586260555 STS(ph)PTLTPSPSPK ddPTM_KYSE-520_SHP099_60min_R1 1 STSPTLTPSPSPK 13 0 A0A0A0MRS7;Q68DC2;H7C163;Q68DC2-4 A0A0A0MRS7 ANKS6 Ankyrin repeat and SAM domain-containing protein 6 1 S(0.018)T(0.018)S(0.962)PT(0.001)LTPSPSPK 205.31 3.4085e-09 274240000.0 502780.0 598420.0 419660.0 375420.0 409610.0 524670.0 393130.0 496210.0 582970.0 503800.0 True False 474889.7911329183 569671.0049532669 446711.9550797408 411099.8039258613 441843.97663790494 521395.33991354593 432871.4169790616 494488.7633262842 477117.3434777778 499336.72395046876 0.9510411879500066 1.1408554140507696 0.894610657805437 0.8232917472471741 0.8848617685122099 1.044175833470773 0.8668928124381252 0.9902911995219773 0.955502210418445 1.0 18.92965348868123 -4.781507422159247 24.999836168883096 0.9281568483035451 1.0459483809349437 0.25752426947523 0.07680809023963094 269.18218994812685 335334.7716984237 0.020069858597617264 0.0418612486518024 1.6538365202102432e-05 4.781507422159247 0.11779153263139863 STS(ph)PVTDPSIPIR ddPTM_KYSE-520_SHP099_60min_R1 7 STSPVTDPSIPIR 13 0 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.299)T(0.174)S(0.409)PVT(0.118)DPSIPIR;S(0.282)T(0.282)S(0.394)PVT(0.042)DPSIPIR;S(0.02)T(0.087)S(0.889)PVT(0.003)DPSIPIR;ST(0.001)S(0.999)PVTDPSIPIR;STS(1)PVTDPSIPIR;S(0.004)T(0.016)S(0.98)PVTDPSIPIR;S(0.001)T(0.02)S(0.979)PVTDPSIPIR 222.73 1.6629000000000003e-11 5858470000.0 9678290.0 11084780.0 8474050.0 6652400.0 7585010.0 10539690.0 7666280.0 9843120.0 11968440.0 10206270.0 True False 9141415.960507216 10552250.530206015 9020300.8219594 7284642.095883017 8181907.13419662 10473907.885210512 8441262.398082664 9808976.514121477 9795272.995819965 10115850.388157904 0.9036725148889699 1.0431402329317743 0.8916997064842906 0.7201215732105692 0.80882049657187 1.035395689271143 0.8344589999041907 0.9696640556887172 0.9683093976248184 1.0 23.270114269249525 -7.397251660750832 7.365236303539025 0.9791027678895322 0.8928258854979076 0.16369229456062073 0.09159420448931778 0.5611143124598941 30.8638908341115 0.054762036893309204 0.026019635867085916 4.0063449456252425e-08 7.397251660750832 -0.08627688239162457 STS(ph)PVTDPSIPIRK ddPTM_KYSE-520_SHP099_60min_R1 2 STSPVTDPSIPIRK 14 1 A0A087WU18;Q99607 A0A087WU18 ELF4 ETS-related transcription factor Elf-4 1 S(0.096)T(0.096)S(0.808)PVTDPSIPIRK;S(0.017)T(0.017)S(0.949)PVT(0.017)DPSIPIRK 99.01100000000001 0.0015550000000000002 1077800000.0 1288890.0 1197660.0 1168980.0 921960.0 1010600.0 1086070.0 924220.0 1149130.0 1470110.0 1175800.0 True False 1217392.7023614843 1140122.615875691 1244334.3212341308 1009582.8012026177 1090128.4704725654 1079291.434272789 1017649.1771179715 1145143.9362389585 1203175.082457272 1165383.326758558 1.0446285564661262 0.9783241185086042 1.0677468028439794 0.8663096322226526 0.9354248043900634 0.9261256871374431 0.873231282575923 0.9826328470170462 1.0324286051044076 1.0 20.152373144505248 -5.247992906439376 24.962881409690628 0.9402447140861794 1.0250422531386323 0.34453888657056575 0.05332446426846824 916.2120221565407 1700910.6875854146 0.014791833035316304 0.025429711862199156 5.6494620230096365e-06 5.247992906439376 0.08479753905245291 STS(ph)QGSINSPVYSR ddPTM_KYSE-520_SHP099_60min_R1 3 STSQGSINSPVYSR 14 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;A0A494C1P1;A0A494C1G0;J3QSX6;O14639-4;O14639-3;O14639-5;H0Y7N6;F6XFR5 F8W8M4;J3QSX6 ABLIM1 Actin-binding LIM protein 1 1 STS(1)QGSINSPVYSR;ST(0.002)S(0.998)QGSINSPVYSR;ST(0.011)S(0.989)QGSINSPVYSR 261.56 1.1595e-24 679330000.0 2628040.0 2054570.0 1569010.0 1407270.0 1495850.0 1897180.0 1668780.0 1842880.0 2365960.0 1871000.0 True False 2482257.3823321452 1955865.373227557 1670150.8951047622 1541016.5176888483 1613564.8847777406 1885338.995896809 1837476.5681233134 1836487.4794114272 1936361.3049979964 1854424.3956159733 1.3385594949033381 1.0547021371436869 0.9006303514196371 0.8309945238705608 0.8701162951654182 1.0166707256191845 0.9908608689937826 0.9903275020286885 1.0441845510530003 1.0 20.822540020075134 -4.315842061834469 2.866810337244836 0.951665812991418 1.383095887443774 0.7559769455839779 0.06538413153678956 0.18485620096657235 2.290122889398152 0.01900260409829327 0.17356148566574267 4.832345060806098e-05 4.315842061834469 0.43143007445235604 STS(ph)QSIVSLLTGTAGEDEK ddPTM_KYSE-520_SHP099_60min_R1 2 STSQSIVSLLTGTAGEDEK 19 0 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 S(0.083)T(0.083)S(0.834)QSIVSLLTGTAGEDEK;S(0.143)T(0.143)S(0.713)QS(0.001)IVSLLTGTAGEDEK 274.68 1.507e-38 159093000.0 286200.0 364740.0 274830.0 244890.0 270520.0 324710.0 254940.0 352520.0 375560.0 390210.0 True False 270323.9154744449 347217.342914098 292545.9815435477 268164.2719711369 291808.38495174947 322683.3644449412 280711.82317462924 351297.1903987863 307367.7710971645 386753.04297878576 0.6989574364881539 0.8977753354952753 0.7564154616350219 0.6933733989672741 0.754508310275288 0.8343395619065397 0.7258167150090837 0.9083243086934307 0.7947391149913312 1.0 18.56105311730216 -8.4599380219348 0.5734552666582017 1.0061709648516113 0.7659468481072528 0.49851257879385746 0.06834340674428738 1.4061852009691382 0.8512775790685858 0.09021403402987709 0.030481302813460277 3.467863367193741e-09 8.4599380219348 -0.2402241167443585 STS(ph)RDRLDDIIVLTK ddPTM_KYSE-520_SHP099_60min_R1 1 STSRDRLDDIIVLTK 15 2 G5E9N8;Q7Z3D4-2;Q7Z3D4-3;Q7Z3D4 G5E9N8 LYSMD3 LysM and putative peptidoglycan-binding domain-containing protein 3 1 S(0.091)T(0.091)S(0.818)RDRLDDIIVLTK 131.18 2.9116e-05 722190000.0 553690.0 593460.0 527940.0 518250.0 529220.0 513520.0 396260.0 503450.0 874840.0 389880.0 True False 522975.71194634953 564949.2907983791 561971.857133866 567504.3241824559 570866.6031500992 510314.93119942734 436317.8279249175 501703.64945611346 715991.1089217272 386425.96652205015 1.3533658637210333 1.461985838796219 1.4542807829188646 1.4685977997031758 1.4772987651116465 1.3206020697636216 1.1291110477173911 1.2983176414659634 1.8528545464112114 1.0 18.559832516110266 -6.269475064926779 22.805193057288097 1.3268802684235173 1.4461917516703728 0.07956805372662268 0.20829516827092664 558.9735700034338 1586351.4397324459 0.07222361508638439 0.06496850826195545 5.376813032768307e-07 6.269475064926779 0.11931148324685559 STS(ph)TGNKESSSTR ddPTM_KYSE-520_SHP099_60min_R1 1 STSTGNKESSSTR 13 1 Q69YQ0-2;Q69YQ0;F8WAN1;C9J8U1;C9JLY8 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 S(0.296)T(0.218)S(0.439)T(0.047)GNKESSSTR 53.21 0.045995999999999995 376440000.0 293010.0 280520.0 301430.0 267200.0 260630.0 268630.0 254140.0 278090.0 278640.0 308720.0 True False 276756.15119904635 267043.39813089557 320860.66010505235 292594.6076633907 281140.0982181523 266953.380526761 279830.9513673813 277125.3706966941 228045.99994278944 305984.98098052596 0.9044762599529685 0.8727336788725955 1.0486157166173888 0.9562384621812942 0.9188035874089033 0.8724394892563401 0.9145251197319088 0.9056829188434299 0.7452849457251732 1.0 18.223101315600882 -6.030378299298953 3.727995735577917 0.8836700414874159 0.947252008761114 0.12390840645361745 0.07212620485361941 0.4774620640605613 14.12276256178359 0.024224574573184974 0.025617279594348757 9.324417283551673e-07 6.030378299298953 0.06358196727369814 STS(ph)TPNVHMVSTTLPVDSR ddPTM_KYSE-520_SHP099_60min_R1 5 STSTPNVHMVSTTLPVDSR 19 0 P04049;P04049-2;H7C155 P04049 RAF1 RAF proto-oncogene serine/threonine-protein kinase 1 S(0.126)T(0.126)S(0.726)T(0.022)PNVHMVSTTLPVDSR;S(0.085)T(0.447)S(0.467)T(0.001)PNVHMVSTTLPVDSR;S(0.045)T(0.158)S(0.791)T(0.007)PNVHMVSTTLPVDSR;S(0.056)T(0.174)S(0.765)T(0.005)PNVHMVSTTLPVDSR;S(0.119)T(0.119)S(0.738)T(0.025)PNVHMVSTTLPVDSR 216.67 8.092399999999999e-19 15237520000.0 1959920.0 2786910.0 2477870.0 2773510.0 1982220.0 2204540.0 1972580.0 2036110.0 2582570.0 2227600.0 True False 1851199.3305963415 2653022.6603628052 2637597.46493218 3037103.5565138157 2138209.4367109896 2190780.64812741 2171987.636925593 2029047.2096416475 2113640.389291735 2207865.197046573 0.8384566834391258 1.2016234795093979 1.194637004315505 1.3755837813723872 0.9684510809678233 0.9922619601314353 0.9837501129285553 0.9190086479717479 0.9573231156137245 1.0 21.074220659244 -5.910092464153647 24.999999997918348 0.9677622618752787 1.16070396954956 0.3360790622841898 0.12538886305248698 22.364633903632296 6212.226954203512 0.03941328817757552 0.04469046752007157 1.2300068663752424e-06 5.910092464153647 0.19294170767428132 STS(ph)TPT(ph)SPGPR ddPTM_KYSE-520_SHP099_60min_R1 1 STSTPTSPGPR 11 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;H3BRB0;A0A0C4DGL7 Q8WWM7-6 ATXN2L Ataxin-2-like protein 2 S(0.16)T(0.167)S(0.627)T(0.066)PT(0.548)S(0.431)PGPR 114.72 0.018456 0.0 704130.0 673790.0 633380.0 567970.0 645060.0 589070.0 549300.0 589910.0 755980.0 648730.0 True False 665070.5052516446 641420.1170205908 674208.688243832 621949.6980335922 695822.5521106594 585393.3956255777 604828.604651384 587863.7398960289 618713.0887049601 642982.7569043024 1.0343520072819459 0.9975697017269405 1.0485641815495483 0.9672883002773267 1.082179179206545 0.9104340502753233 0.9406606913743458 0.9142760573026112 0.962254558246335 1.0 19.294420523246316 -6.274841209600012 24.996921478278065 0.9398633000273117 1.0224045737653578 0.5382440577909501 0.0370052202562944 577.3883036521104 1076934.5315715082 0.012055281775578634 0.010683650582107745 5.310785861548616e-07 6.274841209600012 0.0825412737380461 STS(ph)VPENPK ddPTM_KYSE-520_SHP099_60min_R1 4 STSVPENPK 9 0 A0A494C0P1;P04150-7;P04150-5;P04150-13;P04150-12;P04150-11;P04150-9;P04150-2;P04150-6;P04150-8;P04150-10;P04150;P04150-3;D6RDA9;Q3MSN4 A0A494C0P1 NR3C1 Glucocorticoid receptor 1 S(0.092)T(0.092)S(0.816)VPENPK;ST(0.001)S(0.999)VPENPK;ST(0.002)S(0.998)VPENPK;ST(0.002)S(0.998)VPENPK 158.47 0.00015603 815630000.0 2335510.0 2192090.0 2211990.0 2152510.0 2195920.0 3311230.0 2953270.0 3586280.0 4172690.0 3492210.0 True False 2205954.604576243 2086778.7060058278 2354578.4147091373 2357083.9032242675 2368726.4109243127 3290563.385331598 3251815.3527376507 3573840.0317240404 3415034.6809549136 3461271.7362982645 0.6373248830603087 0.6028936370761749 0.6802639590578041 0.6809878226276174 0.6843514729235333 0.9506804538989376 0.9394857152173144 1.0325222357566657 0.9866415991387026 1.0 21.72287077786618 -6.272414715409608 2.3213528086709303 0.9935942204940782 0.647133794044949 0.9657493920436739 0.03065918174047904 0.05319196588728442 0.5640151252355841 0.012463869914561413 0.011419354965702034 5.340541381729805e-07 6.272414715409608 -0.3464604264491292 STS(ph)WHTALR ddPTM_KYSE-520_SHP099_60min_R1 1 STSWHTALR 9 0 E7EPJ7;O75962-4;O75962;O75962-2;O75962-3 E7EPJ7 TRIO Triple functional domain protein 1 S(0.034)T(0.164)S(0.802)WHTALR 94.465 0.0034258 223080000.0 326840.0 249330.0 221080.0 272190.0 227610.0 266200.0 245260.0 257190.0 295750.0 244670.0 True False 308709.53366061335 237351.81254804033 235331.1705405071 298058.8557630924 245521.61207625226 264538.5470581237 270053.2743069335 256297.86791859742 242049.25525078943 242502.41415037974 1.2730163315783631 0.9787606172071118 0.9704281557979639 1.2290964475853061 1.0124501767805094 1.0908697465340653 1.113610663436402 1.056887902813466 0.998131322110017 1.0 17.887639584068307 -6.471335870473858 0.01276564929962279 6.686273899863317e-07 2.139883379586587 0.1317936122652017 0.09345618652080759 3268.015623031647 19.423340731949875 1580.765573430022 1672.162674875927 3.3780348795905715e-07 6.471335870473858 2.139882710959197 STS(ph)YGYS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 STSYGYSR 8 0 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 2 S(0.043)T(0.036)S(0.922)YGYS(1)R 75.5 0.017356 877950000.0 2474600.0 2483900.0 2425500.0 2281500.0 2319600.0 2455700.0 2354700.0 2458900.0 2893800.0 2464600.0 True False 2337329.005007202 2364569.7155900905 2581851.6109372145 2498333.0740420134 2502139.3232813766 2440373.0654043374 2592736.055657408 2450370.6498115757 2368358.866761567 2442765.561429786 0.9568372184022151 0.9679888045441715 1.0569379443134197 1.022747787790042 1.0243059599288105 0.9990205789441177 1.0613937320042461 1.0031133107907981 0.9695399772114571 1.0 21.220083980374202 -4.626833702418249 7.770235145035078 1.0185586932003259 0.9597067079611092 0.4170856681313123 0.025961508186898737 0.19772202904850392 12.875357857677063 0.006652457812672194 0.01776540315568823 2.3613822672009287e-05 4.626833702418249 -0.05885198523921664 STSGPRPGCQPSS(ph)PCVPK ddPTM_KYSE-520_SHP099_60min_R1 1 STSGPRPGCQPSSPCVPK 18 1 O14545 O14545 TRAFD1 TRAF-type zinc finger domain-containing protein 1 1 STSGPRPGCQPS(0.045)S(0.955)PCVPK 161.64 1.858e-08 2631300000.0 1284100.0 1201100.0 1131000.0 884410.0 927990.0 1095800.0 979940.0 1165200.0 1376000.0 1224600.0 True False 1212868.4132101145 1143397.3531121435 1203906.069663982 968464.0604924368 1001017.5334591675 1088960.7057336294 1079001.8984927686 1161158.1931597257 1126153.0861372312 1213750.9967243832 0.9992728463114341 0.9420361805657775 0.9918888412145733 0.7979100022212827 0.8247305552462315 0.8971862504520843 0.8889812666722668 0.9566691984545491 0.9278287632112704 1.0 20.211041049700864 -9.88389366842485 22.373177405817685 0.9999999999999961 0.9111445296433875 0.14558464289658934 0.062102233632778295 0.0 0.0 0.06513804489802294 0.01579829643298672 1.3064907268991388e-10 9.88389366842485 -0.08885547035660857 STSGS(ph)PRPAGAKPK ddPTM_KYSE-520_SHP099_60min_R1 2 STSGSPRPAGAKPK 14 2 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3-2 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 STSGS(1)PRPAGAKPK;S(0.001)T(0.008)S(0.046)GS(0.945)PRPAGAKPK 168.69 2.0476e-08 5598400000.0 3348300.0 2813000.0 2940900.0 2812400.0 3052200.0 2648500.0 2491600.0 2617000.0 3631000.0 2796900.0 True False 3162563.1243294277 2677859.2576009207 3130475.119606373 3079689.650421105 3292390.775357571 2631969.7290888084 2743475.2436726536 2607922.237812393 2971701.930061255 2772121.6419552756 1.1408457249728623 0.9659963030021048 1.1292704736428298 1.1109504012417328 1.1876790417592682 0.9494423654628615 0.9896662549546648 0.9407676049788829 1.0719955015989877 1.0 21.402559134301193 -6.277768621777449 24.98817797454468 0.9866280625548258 1.1005801717381378 0.4622030615778273 0.06261998561595751 785.931188060035 1202684.3411050078 0.022130806833981866 0.019573937215720802 5.275108274841568e-07 6.277768621777449 0.113952109183312 STSTPT(ph)SPGPR ddPTM_KYSE-520_SHP099_60min_R1 1 STSTPTSPGPR 11 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;H3BRB0;A0A0C4DGL7 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 STST(0.007)PT(0.497)S(0.497)PGPR 128.85 0.0007591 6722800000.0 4210400.0 5031900.0 3771000.0 3510600.0 3354400.0 4655900.0 4101700.0 4956000.0 6195600.0 5478400.0 True False 3976840.7187756845 4790159.970964121 4014084.693813332 3844246.3684996217 3618372.196074777 4626840.801081584 4516339.864734352 4938808.792739091 5070635.218366154 5429865.638130698 0.7324013122624455 0.8821875696749645 0.7392604092493221 0.7079818589807783 0.6663833761677478 0.852109630225479 0.8317590463047185 0.9095637207036564 0.9338417478985328 1.0 22.372485068348134 -7.2263647625664005 1.0620232112098504 0.9815496627628904 0.7549558613297808 0.6869187987695813 0.05826945545772169 0.33529338649074747 0.6715745328233624 0.0543156495311164 0.021949629336867654 5.9379322406094404e-08 7.2263647625664005 -0.2265938014331096 STSTPTS(ph)PGPR ddPTM_KYSE-520_SHP099_60min_R1 5 STSTPTSPGPR 11 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;H3BRB0;A0A0C4DGL7 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 STST(0.003)PT(0.121)S(0.876)PGPR;STST(0.004)PT(0.002)S(0.994)PGPR;ST(0.006)S(0.013)T(0.182)PT(0.122)S(0.677)PGPR;STSTPT(0.006)S(0.993)PGPR;STST(0.004)PT(0.002)S(0.994)PGPR 174.23 9.1088e-06 15811750000.0 8369520.0 9921150.0 7624950.0 6859420.0 7091490.0 8954540.0 8146510.0 10324110.0 12408620.0 10788580.0 True False 7905246.041375517 9444523.062050248 8116466.477351348 7511337.214440173 7649549.917941302 8898651.394342033 8970038.733075824 10288298.072075386 10155527.403854772 10693001.574588241 0.739291581155493 0.8832433995422778 0.7590447285297338 0.7024535778888085 0.7153791070339262 0.8321939665182081 0.8388700469653897 0.9621524882709616 0.9497358934267093 1.0 23.35016354523448 -7.084117151755509 1.4718944967033056 0.9822494997348429 0.7659344139073119 0.7641673712615158 0.04990610748336572 0.2231106983074658 0.9082846294025796 0.039277916953263436 0.01739927509735415 8.239158321842289e-08 7.084117151755509 -0.216315085827531 STSYGYS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 9 STSYGYSR 8 0 Q13242 Q13242 SRSF9 Serine/arginine-rich splicing factor 9 1 STSYGYS(1)R;STSYGYS(1)R;STSYGYS(1)R;STSYGYS(1)R;STSYGYS(1)R;STSYGYS(1)R;STSYGYS(1)R;STSYGYS(1)R;STSYGYS(1)R 128.86 0.00082642 34585970000.0 13458020.0 11878970.0 11128380.0 11585600.0 11326170.0 11967020.0 11328240.0 11822580.0 13995650.0 11362920.0 True False 12711476.802702257 11308286.45050251 11845733.18083755 12686691.940662337 12217475.141908027 11892329.389239332 12473409.052168202 11781570.22939092 11454392.761625381 11262253.369018 1.128679704336169 1.0040873775412604 1.0518084430088102 1.1264790024670295 1.0848162211940466 1.0559458218152546 1.1075411503777781 1.0461112748361299 1.0170604750498642 1.0 23.424992177159066 -7.656600492669865 2.7244137988979986 1.0043823902253648 1.0770493292482202 0.3895916808883624 0.03563904718181936 0.29998042697436733 4.141508285203675 0.03154701068704076 0.009572959537478283 2.204953866637047e-08 7.656600492669865 0.07266693902285537 STT(ph)PPPAEPVSLPQEPPK ddPTM_KYSE-520_SHP099_60min_R1 6 STTPPPAEPVSLPQEPPK 18 0 Q9UN86-2;Q9UN86 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.126)T(0.126)T(0.748)PPPAEPVSLPQEPPK;S(0.017)T(0.017)T(0.966)PPPAEPVSLPQEPPK;S(0.238)T(0.238)T(0.525)PPPAEPVSLPQEPPK;S(0.125)T(0.125)T(0.751)PPPAEPVSLPQEPPK;S(0.019)T(0.019)T(0.963)PPPAEPVSLPQEPPK;S(0.019)T(0.019)T(0.961)PPPAEPVSLPQEPPK 272.24 1.8579e-29 3845980000.0 1832420.0 2638570.0 1780530.0 1535070.0 1781280.0 2425060.0 1744870.0 2345380.0 2658610.0 2336330.0 True False 1730772.0097612918 2511809.136625686 1895305.812748727 1680962.591264377 1921456.6019031948 2409924.3010096652 1921258.4878901513 2337244.4241958046 2175873.4421041454 2315631.933837235 0.7474296689686899 1.0847186463106708 0.8184831902918244 0.7259195931362257 0.8297763447747708 1.0407199286702609 0.8296907897216778 1.0093333012223387 0.9396456363850987 1.0 21.14297452669843 -6.23578053112123 24.416664076364874 0.9560745776185285 0.8471168621685305 0.2516129569793132 0.10505953228508584 962.6923650364002 916087.1495755304 0.03518180161999827 0.03516831795841008 5.810579785309384e-07 6.23578053112123 -0.108957715449998 STT(ph)PPPAEPVSLPQEPPKPR ddPTM_KYSE-520_SHP099_60min_R1 8 STTPPPAEPVSLPQEPPKPR 20 1 Q9UN86-2 Q9UN86-2 G3BP2 Ras GTPase-activating protein-binding protein 2 1 S(0.141)T(0.141)T(0.717)PPPAEPVSLPQEPPKPR;S(0.047)T(0.047)T(0.906)PPPAEPVSLPQEPPKPR;S(0.001)T(0.183)T(0.816)PPPAEPVSLPQEPPKPR;S(0.138)T(0.138)T(0.724)PPPAEPVSLPQEPPKPR;S(0.001)T(0.006)T(0.993)PPPAEPVSLPQEPPKPR;S(0.02)T(0.113)T(0.866)PPPAEPVSLPQEPPKPR;S(0.119)T(0.119)T(0.761)PPPAEPVSLPQEPPKPR;S(0.024)T(0.031)T(0.944)PPPAEPVSLPQEPPKPR 214.65 2.6392e-18 151612600000.0 19052000.0 22525700.0 16539600.0 14137800.0 15167500.0 21035300.0 15660300.0 21166100.0 24052100.0 22324700.0 True False 17995147.580779575 21443531.560234994 17605769.080295663 15481452.261315424 16361095.958730062 20904010.89005164 17243395.95379952 21092679.739304896 19684844.944099784 22126920.526353773 0.8132694090597405 0.9691150440340379 0.7956719083130753 0.6996659224620339 0.7394203788658049 0.9447320455259188 0.7792948835000406 0.9532587109978966 0.8896332827089333 1.0 24.399299344880564 -7.270715535303215 24.558806802935585 0.9410845129604876 0.8220043872288724 0.3352485977962135 0.0820674855252064 725.9493951101721 1921950.9854960884 0.0465727479132032 0.02287458390090833 5.361477215200884e-08 7.270715535303215 -0.1190801257316152 STT(ph)PTSSPFR ddPTM_KYSE-520_SHP099_60min_R1 1 STTPTSSPFR 10 0 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;H7C5N8;A0A2R8YET2;A0A2R8Y7F4;A0A2R8Y424 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.001)T(0.006)T(0.992)PT(0.001)S(0.001)SPFR 208.15 2.9138000000000003e-08 615580000.0 1330000.0 1460700.0 1067700.0 847520.0 902380.0 1164000.0 788180.0 987580.0 1218200.0 1174700.0 True False 1256222.2487107303 1390525.7794445993 1136525.6503804005 928068.0459838215 973392.1721601351 1156735.0442361226 867856.9262955165 984154.3154829057 997005.5883229466 1164293.0719027696 1.0789570762091056 1.1943090730344246 0.9761508316140801 0.7971086218585046 0.8360370731823983 0.9935084835175605 0.7453938765410703 0.8452805734509194 0.856318406750948 1.0 20.151022823585585 -4.96486543071239 4.2662661711981285 0.8609146184860945 1.1334376447585213 0.6454271545037522 0.07904887345322262 0.11320134105228735 4.6542282896414715 0.020537053663404213 0.04393033909291759 1.0842628286585056e-05 4.96486543071239 0.27252302627242675 STTDETWDS(ph)PEELKKPEEDFDSHGDAGGK ddPTM_KYSE-520_SHP099_60min_R1 2 STTDETWDSPEELKKPEEDFDSHGDAGGK 29 2 Q8IVL0-3;Q8IVL0-2;Q8IVL0;H0YHA8;A0A2R8YFX5 Q8IVL0-3 NAV3 Neuron navigator 3 1 STTDET(0.009)WDS(0.991)PEELKKPEEDFDSHGDAGGK;STTDET(0.003)WDS(0.997)PEELKKPEEDFDSHGDAGGK 213.52 1.7831e-22 761730000.0 375890.0 303512.0 278474.0 324400.0 359620.0 332580.0 294200.0 294290.0 426420.0 360550.0 True False 355038.6323818626 288930.8279392003 296424.87961415394 355230.8784655833 387920.04804209725 330504.24485571333 323940.60711530555 293269.17667780234 348992.877173429 357355.80750365544 0.9935157759489633 0.8085242267575147 0.8294950673527861 0.9940537442138803 1.0855288759736448 0.9248604273832393 0.9064931933756021 0.820664364534785 0.9765977489252337 1.0 18.447001708599714 -5.2611663131762745 24.9999981749356 0.9525892468839666 0.870312943747119 0.1755625351240192 0.07948410642998233 46.607799720039566 4266904.844043354 0.023588638710515447 0.0378369762725725 5.480670423228198e-06 5.2611663131762745 -0.08227630313684764 STTTGHLIYK ddPTM_KYSE-520_SHP099_60min_R1 1 STTTGHLIYK 10 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A0A2U3TZH3;Q05639;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8Y488;A0A2R8YDN5 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 78.556 0.021643 348200000.0 706230.0 1073200.0 1110900.0 2406800.0 709090.0 802320.0 861660.0 717730.0 651150.0 821080.0 False True 667054.0140653991 1021641.8610939578 1182510.3915028458 2635541.5483691916 764891.3488297946 797312.4232745066 948765.0017912094 715240.3621494417 532917.5741557111 813805.8699905729 0.8196721585126022 1.2553876775376325 1.453062007916635 3.238538385573112 0.9398941160729831 0.9797329469787955 1.165837009509651 0.8788832675263537 0.6548460680946974 1.0 19.634325161060953 -5.914309561206144 22.808487713664334 0.9432970253304428 1.6991777514711468 0.27858901247700907 0.5951672692471538 17.269785147006747 4591.857266961218 0.19362612799752218 0.2195515278873721 1.2181210236800332e-06 5.914309561206144 0.755880726140704 STVTGERQS(ph)GDGQESTEPVENK ddPTM_KYSE-520_SHP099_60min_R1 8 STVTGERQSGDGQESTEPVENK 22 1 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 STVTGERQS(1)GDGQESTEPVENK;STVTGERQS(1)GDGQESTEPVENK;STVTGERQS(0.999)GDGQESTEPVENK;STVTGERQS(1)GDGQESTEPVENK;STVTGERQS(1)GDGQESTEPVENK;STVTGERQS(1)GDGQESTEPVENK;STVTGERQS(1)GDGQESTEPVENK;STVTGERQS(1)GDGQESTEPVENK 281.98 1.4717e-44 7323490000.0 4428290.0 3998720.0 4139880.0 3437930.0 3721730.0 3708810.0 3426720.0 3679990.0 4999400.0 3838240.0 True False 4182643.9261227367 3806615.4889989165 4406743.2888422 3764669.8335486525 4014608.97725297 3685661.941076783 3773126.2991643753 3667224.9736061217 4091634.98461808 3804236.1797055355 1.099470098212065 1.0006254367975558 1.1583779451840714 0.9895993980689323 1.0552996153786955 0.9688309996994112 0.9918223056951295 0.9639845688786811 1.075547045802711 1.0 21.859175385636405 -5.312701968974327 24.999843940907816 1.0047995345121408 1.0776049078649617 0.35450143994613503 0.048852610122316696 382.2464701864411 186413.9047830001 0.013127584914046081 0.019471411591603614 4.867411132038934e-06 5.312701968974327 0.07280537335282089 SVAAEGALLPQT(ph)PPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 SVAAEGALLPQTPPSPR 17 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 2 SVAAEGALLPQT(1)PPS(1)PR;SVAAEGALLPQT(1)PPS(1)PR;SVAAEGALLPQT(1)PPS(1)PR;SVAAEGALLPQT(1)PPS(1)PR;SVAAEGALLPQT(1)PPS(1)PR;SVAAEGALLPQT(1)PPS(1)PR;SVAAEGALLPQT(1)PPS(1)PR;SVAAEGALLPQT(1)PPS(1)PR 196.76 3.9259e-12 3624460000.0 3286850.0 3193420.0 2825810.0 2729680.0 3063760.0 3036010.0 2737500.0 3035010.0 3860620.0 2942280.0 True False 3104521.8783269688 3040003.309778854 3007966.23405586 2989107.966491785 3304860.481590165 3017061.135439272 3014233.215425386 3024482.2586866566 3159628.7263104073 2916213.688259204 1.0645728366291884 1.0424487485323972 1.031462902106953 1.0249962060482936 1.1332710270497903 1.034581638371044 1.0336119151901704 1.0371264187063336 1.0834695478699665 1.0 21.475665007677833 SVAAEGALLPQT(ph)PPSPR ddPTM_KYSE-520_SHP099_60min_R1 3 SVAAEGALLPQTPPSPR 17 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 SVAAEGALLPQT(0.905)PPS(0.095)PR;SVAAEGALLPQT(0.995)PPS(0.005)PR;SVAAEGALLPQT(1)PPSPR 211.09 3.0024e-17 8396600000.0 1057720.0 1388310.0 893880.0 883380.0 907840.0 1280890.0 890140.0 1125190.0 1264850.0 1137960.0 True False 999046.1630874559 1321613.503704206 951500.9350585676 967336.1696021183 979281.8430969842 1272895.49038798 980124.0381292237 1121286.9785113197 1035185.1242737467 1127878.5597194822 0.8857745849304303 1.1717693295215295 0.8436200217293056 0.8576598617520552 0.8682511380840009 1.1285749511051661 0.868997845275996 0.9941557704494339 0.9178161206745613 1.0 20.105180308406435 SVAAEGALLPQTPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 7 SVAAEGALLPQTPPSPR 17 0 Q86X27;Q86X27-3;H7C2H2 Q86X27 RALGPS2 Ras-specific guanine nucleotide-releasing factor RalGPS2 1 SVAAEGALLPQT(0.003)PPS(0.997)PR;SVAAEGALLPQTPPS(1)PR;SVAAEGALLPQT(0.084)PPS(0.916)PR;SVAAEGALLPQTPPS(1)PR;SVAAEGALLPQT(0.105)PPS(0.895)PR;SVAAEGALLPQTPPS(1)PR;SVAAEGALLPQTPPS(1)PR 248.78 1.3619e-23 6113150000.0 5922080.0 7062490.0 4962650.0 4341140.0 4631830.0 6684580.0 4269020.0 6334420.0 7129020.0 6863960.0 True False 5593570.4170262 6723197.379386386 5282550.359520739 4753720.640388671 4996328.66949232 6642859.056700941 4700574.203220189 6312447.375484736 5834569.675969513 6803150.654480071 0.822202932305001 0.9882476106800555 0.7764858707108048 0.6987528105464208 0.7344139389596045 0.9764386229380981 0.6909407775829167 0.9278711726496616 0.8576275864370695 1.0 22.69777160699564 -8.145359087878006 1.0386460673319327 0.997978797245316 0.8179127573616426 0.2212407700789476 0.10114273374991478 1.128842166233936 2.577766513696153 0.0982611985364899 0.03198445693521378 7.155515258019098e-09 8.145359087878006 -0.18006603988367342 SVAEGLS(ph)GSLVQEPFQLATEK ddPTM_KYSE-520_SHP099_60min_R1 2 SVAEGLSGSLVQEPFQLATEK 21 0 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 S(0.077)VAEGLS(0.462)GS(0.462)LVQEPFQLATEK;S(0.119)VAEGLS(0.44)GS(0.44)LVQEPFQLATEK 126.46 3.3528e-05 120104000.0 159329.0 185022.0 129817.0 136733.0 118411.0 149298.0 127136.0 176829.0 194592.0 173990.0 True False 150490.7027555129 176133.26539631627 138185.2115345438 149728.0632097246 127729.2720335708 148366.17580271885 139988.14760778868 176215.62147119883 159258.99806512808 172448.58396217163 0.8726699825411416 1.0213668407677556 0.8013125324639149 0.8682475655617387 0.7406803181497247 0.860350212184198 0.8117674520220851 1.0218444096348946 0.9235158353058044 1.0 17.395806756792318 -7.261594524991528 24.99965978193559 0.9795100940383867 0.8546593139568659 0.4010911145979932 0.07166380307639268 15.428893383470987 2485657.3509709416 0.0377655337214493 0.019956615001779525 5.475269177530107e-08 7.261594524991528 -0.12485078008152084 SVAGKEDNTDT(ph)DQEKKEEK ddPTM_KYSE-520_SHP099_60min_R1 1 SVAGKEDNTDTDQEKKEEK 19 3 A0A1B0GV47;Q7Z4S6-6;Q7Z4S6-3;Q7Z4S6-5;Q7Z4S6-2;Q7Z4S6;Q7Z4S6-4 A0A1B0GV47 KIF21A Kinesin-like protein KIF21A 1 SVAGKEDNT(0.021)DT(0.979)DQEKKEEK 192.18 5.0935e-13 1355000000.0 1308200.0 1241400.0 1223300.0 1112300.0 1173000.0 1008700.0 972090.0 999370.0 1308000.0 872750.0 True False 1235631.5381679547 1181761.2806206108 1302155.8753492048 1218012.6575748113 1265308.4265429613 1002404.3291417328 1070358.3438841505 995903.4187247118 1070500.1719967276 865018.1139892262 1.42844585354353 1.366169403286426 1.5053509912573035 1.408077631990469 1.462753676576443 1.1588246684441312 1.2373825779762595 1.1513093224509237 1.237546537678702 1.0 19.722370818387105 -6.2637301545804185 24.98148051433546 1.1714925660053508 1.4328883772169791 0.792795547948138 0.07064818707137913 90.8959582220456 991237.6736722306 0.022822687134558456 0.021079422290436876 5.448410803605527e-07 6.2637301545804185 0.26139581121162836 SVAPLPPQRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 SVAPLPPQRSPR 12 1 Q9BST9;Q9BST9-3;Q9BST9-2 Q9BST9 RTKN Rhotekin 1 SVAPLPPQRS(1)PR;SVAPLPPQRS(1)PR;SVAPLPPQRS(1)PR;SVAPLPPQRS(1)PR;SVAPLPPQRS(1)PR;SVAPLPPQRS(1)PR 134.25 3.0211999999999998e-05 6323900000.0 3566040.0 3787760.0 3901860.0 2860390.0 3425750.0 3092510.0 2783550.0 2725190.0 4384690.0 3033340.0 True False 3368224.6524755 3605790.3240563325 4153380.138796738 3132240.605592386 3695337.0351488097 3073208.497981664 3064938.3988300716 2715736.9519541264 3588540.8250400145 3006466.967502809 1.1203265124423334 1.1993447335466072 1.3814820464322488 1.041834365535719 1.229129431685784 1.022199322726732 1.0194485527229422 0.9032984500773794 1.1936072685410808 1.0 21.519637676841462 -6.268481605962423 23.88954801757182 1.0211504667907696 1.1966118029942232 0.38826160313334046 0.10445054425691573 307.6359377342786 1043598.0872073373 0.03566286109488692 0.03217322782409809 5.389126699091605e-07 6.268481605962423 0.1754613362034536 SVAS(ph)DVPEELDFLVPK ddPTM_KYSE-520_SHP099_60min_R1 3 SVASDVPEELDFLVPK 16 0 Q14966;Q14966-5;A0A096LNS4;A0A096LPK8 Q14966 ZNF638 Zinc finger protein 638 1 S(0.025)VAS(0.975)DVPEELDFLVPK;S(0.125)VAS(0.875)DVPEELDFLVPK;S(0.129)VAS(0.871)DVPEELDFLVPK 128.96 6.7137e-05 60181000.0 47780.0 64180.0 51811.0 41084.0 49678.0 52200.0 41193.0 60498.0 67569.0 62842.0 True False 45129.5481529314 61096.69646385601 55150.819960531066 44988.61100764499 53587.375970845096 51874.20043739313 45357.19044493803 60288.14655833935 55300.1728758769 62285.26877033617 0.7245621483843493 0.9809172806034959 0.8854552777782514 0.722299379866707 0.8603539332620892 0.8328486247473432 0.7282169819670062 0.9679358819280239 0.8878531628366999 1.0 15.926603368078938 -7.287846071221457 24.770535020326644 0.9459209184122214 0.8263782750387355 0.3555242661603629 0.08135371312259912 872.3332848350776 818278.2693764466 0.04440072163730595 0.021339370685216463 5.1541129155453266e-08 7.287846071221457 -0.11954264337348586 SVAS(ph)SQPAKPTK ddPTM_KYSE-520_SHP099_60min_R1 2 SVASSQPAKPTK 12 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 S(0.118)VAS(0.813)S(0.069)QPAKPTK;S(0.252)VAS(0.74)S(0.008)QPAKPTK 182.03 4.7107e-07 13291200000.0 4464400.0 4193900.0 3774500.0 3524200.0 4047200.0 3908600.0 3876900.0 3880300.0 4791400.0 3645900.0 True False 4216750.832439243 3992418.7488277648 4017810.309413534 3859138.9084106334 4365691.614581991 3884204.977578447 4268814.886897775 3866840.1449688287 3921402.541364777 3613600.162467277 1.1669112914695436 1.1048313508215695 1.111858016596466 1.067948509769744 1.2081280214469563 1.0748851015454925 1.181319098675027 1.0700796909220431 1.0851788701180873 1.0 21.785005453075737 -8.045997271204259 1.2641114900259067 1.0016959735267903 1.12684287954776 0.4301819937237663 0.04479359144365347 0.4750539237598709 1.6898183877447184 0.0400793306137853 0.012349872043785851 8.995032333469088e-09 8.045997271204259 0.12514690602096978 SVASLNRS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 3 SVASLNRSPER 11 1 Q12923-3;Q12923;Q12923-4 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 SVAS(0.003)LNRS(0.997)PER;SVASLNRS(1)PER;SVAS(0.001)LNRS(0.999)PER 112.02 0.00019167 1190280000.0 929020.0 971630.0 1806070.0 1496920.0 1321180.0 1581340.0 1719900.0 1133620.0 944290.0 3138730.0 True False 877485.4086445442 924951.436353636 1922492.1620141729 1639186.826734591 1425149.3495140935 1571470.2704917106 1893764.2766064384 1129687.736808897 772830.739613754 3110923.2940949895 0.28206590959993977 0.2973237681910499 0.6179812165935941 0.526913289648131 0.4581113755582614 0.5051459396233274 0.6087466959410712 0.363135837824487 0.24842487793919749 1.0 21.568911392163983 -11.034621220598686 2.7973723418856498 1.6947249927468093 0.4441442603441933 0.6411258701290038 0.12679682095377434 22370555.625578187 6420003.896005226 99869225.8430024 0.033489643614409946 9.23376418934318e-12 11.034621220598686 -1.2505807324026161 SVAVS(ph)DEEEVEEEAER ddPTM_KYSE-520_SHP099_60min_R1 2 SVAVSDEEEVEEEAER 16 0 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 SVAVS(1)DEEEVEEEAER;SVAVS(1)DEEEVEEEAER 192.96 3.4847e-12 525170000.0 384590.0 366440.0 303670.0 272950.0 271030.0 273170.0 230157.0 293880.0 331210.0 277470.0 True False 363256.02603884245 348835.6723623461 323245.0540891791 298891.0859345898 292358.5190502467 271465.04470273346 253423.51567585737 292860.5988721076 271070.61312464555 275011.8316683935 1.3208741741586336 1.2684387804193407 1.1753859902251214 1.0868299160851729 1.0630761494027996 0.9871031477295249 0.9215004101402913 1.0649018156616474 0.9856689127888132 1.0 18.069134162609114 -5.048266827334905 0.9079598634986252 0.9915683065707162 1.354946923902521 0.919170427397178 0.035016342854653944 0.2275845953259212 0.3022137382052791 0.014485233101338493 0.06515110699722941 8.948148289799519e-06 5.048266827334905 0.36337861733180477 SVAVS(ph)DEEEVEEEAERR ddPTM_KYSE-520_SHP099_60min_R1 1 SVAVSDEEEVEEEAERR 17 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 SVAVS(1)DEEEVEEEAERR 101.92 0.00021642 0.0 115730.0 117910.0 101290.0 97929.0 114700.0 118730.0 87782.0 95388.0 137630.0 93440.0 True False 109310.22619796463 112245.42661348163 107819.31546973009 107236.14271657265 123726.23744627259 117988.96202934277 96655.86122976117 95057.12129172662 112639.86136996163 92612.19429522006 1.1803005752084463 1.211994030242677 1.1642021473547453 1.1579052146711457 1.3359605437257023 1.2740110838236824 1.043662359641875 1.0263996228046695 1.2162530239905485 1.0 16.498914545939645 -6.767127437588877 24.999385507162895 1.0737786992940197 1.2201446722006766 0.4976789073686211 0.07339361941039757 128.67408797052863 565524.0010281851 0.03115787362278272 0.021659661064725198 1.7095136088331392e-07 6.767127437588877 0.14636597290665687 SVCPGGS(ph)SPGSSSGGGR ddPTM_KYSE-520_SHP099_60min_R1 2 SVCPGGSSPGSSSGGGR 17 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 SVCPGGS(0.656)S(0.343)PGSSSGGGR;SVCPGGS(0.5)S(0.5)PGSSSGGGR 324.96 8.8226e-48 1300560000.0 1067750.0 1189120.0 860290.0 709390.0 723950.0 1013700.0 785360.0 1042120.0 1186550.0 1060980.0 True False 1008519.7789931458 1131992.8902944908 915745.6699126681 776810.2123141185 780920.746287961 1007373.122287078 864751.8531749701 1038505.1289526355 971102.430491375 1051580.5426299493 0.9590513879905854 1.0764680824765305 0.8708278945732819 0.7387072894781371 0.7426161997396016 0.9579609753597087 0.8223353496178903 0.98756594179214 0.9234693788292216 1.0 20.004127922487314 -9.327286716087775 12.264592938635124 0.9999999964476808 0.8951026244884877 0.08269919390318792 0.1019235660324831 0.0 0.0 0.10786581687432066 0.026161303315668 4.706664953432661e-10 9.327286716087775 -0.10489737195919313 SVCPGGSS(ph)PGSSSGGGR ddPTM_KYSE-520_SHP099_60min_R1 1 SVCPGGSSPGSSSGGGR 17 0 Q53LP3 Q53LP3 SOWAHC Ankyrin repeat domain-containing protein SOWAHC 1 SVCPGGS(0.154)S(0.828)PGS(0.014)S(0.004)SGGGR 131.79 0.0019464000000000003 0.0 192840.0 222230.0 191790.0 166000.0 190690.0 209340.0 175010.0 212880.0 236900.0 220980.0 True False 182142.78078299077 211553.7372259692 204153.09027485 181776.5900902802 205696.2181223169 208033.4314092699 192701.71873300328 212141.56896656562 193884.93176301607 219022.28911983842 0.8316175559800265 0.9659004938543821 0.9321110243859577 0.8299456225243853 0.9391565531934052 0.9498276739105947 0.8798269779180611 0.9685843838957048 0.8852292273181913 1.0 17.74071816968052 -13.999999994619996 0.17961221742018135 1.3558344565417246 0.8939732293234417 0.2532279886745641 0.04810124279744495 196.6202052050336 1.8908697348238082 24.981375978503753 0.14727783408269882 1.0000000123879171e-14 13.999999994619996 -0.46186122721828293 SVDAIRS(ph)S(ph)VIPR ddPTM_KYSE-520_SHP099_60min_R1 1 SVDAIRSSVIPR 12 1 Q5JSZ5;Q5JSZ5-5;A0A1W2PQP5 Q5JSZ5 PRRC2B Protein PRRC2B 2 S(0.001)VDAIRS(0.999)S(0.999)VIPR 53.567 0.044969 415190000.0 345540.0 365640.0 363720.0 301190.0 307860.0 303890.0 305540.0 290600.0 415560.0 294350.0 True False 326372.2073830872 348074.10556317103 387165.97317257634 329815.0070439247 332086.8305162121 301993.3097877281 336426.96498304 289591.97642654966 340104.7794151072 291742.28800083505 1.1187003763477479 1.193087597784846 1.3270821169794491 1.1305012012621931 1.1382882913266985 1.0351372502667961 1.1531648952519253 0.992629414168853 1.1657712762372445 1.0 18.154334994259738 -5.7403369212658735 2.250184602267886 1.0762682136402044 1.210282116970009 0.38518582219971464 0.0741361345968197 0.30716181385430963 3.1914311740981884 0.023890376019060296 0.031029036305466218 1.8182897005432504e-06 5.7403369212658735 0.13401390332980467 SVDETLR ddPTM_KYSE-520_SHP099_60min_R1 2 SVDETLR 7 0 Q06830;A0A0A0MSI0;A0A0A0MRQ5;H7C3T4;Q13162 Q06830 PRDX1;PRDX4 Peroxiredoxin-1;Peroxiredoxin-4 0 ; 206.65 4.6443e-05 1261340000.0 1669080.0 2035900.0 1417000.0 1174960.0 1844650.0 1910960.0 1342690.0 1604030.0 1762440.0 1710480.0 False True 1576492.80517151 1938092.3080517997 1508342.0872801612 1286627.8451353963 1989813.4603772156 1899032.98980538 1478422.2085916013 1598465.9943134172 1442425.3234968763 1695326.4779333044 0.929905139624399 1.1431970970066132 0.8897059692708349 0.7589262964286773 1.1737051749483125 1.120157689108003 0.8720575227456359 0.9428661765856654 0.8508245121348377 1.0 20.69313169680979 -6.812480130380445 24.999991801080068 0.911675875283124 1.0005616846416512 0.10289106479806898 0.12423460268683671 273.3277087004042 133874.46475936726 0.05474445060173929 0.03690875622842622 1.5399969816039383e-07 6.812480130380445 0.08888580935852719 SVDQGGGGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 SVDQGGGGSPR 11 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 SVDQGGGGS(1)PR;SVDQGGGGS(1)PR;SVDQGGGGS(1)PR;SVDQGGGGS(1)PR;SVDQGGGGS(1)PR 122.52 0.00029610000000000004 3653730000.0 6842140.0 5924130.0 5656830.0 5978030.0 6074790.0 6265740.0 6347990.0 5613670.0 6882650.0 6149610.0 True False 6462592.854732068 5639525.902499578 6021478.313048015 6546180.173839744 6552841.412172987 6226633.192501763 6989706.779612118 5594197.489010429 5632934.257487214 6095129.2397241825 1.0602880760284772 0.9252512425404745 0.9879164290403956 1.0740018654856238 1.075094744417514 1.021575252567332 1.1467692488056935 0.9178144168873404 0.9241697814667038 1.0 22.53922538106915 -7.31377238482389 24.999977627681126 0.9407440018940293 1.0367898298144425 0.3448640245203962 0.05905282526298558 411.07522170487385 196372.468232437 0.03361944913480088 0.016150291560337492 4.8554290813427126e-08 7.31377238482389 0.09604582792041316 SVEDEMDS(ph)PGEEPFYTGQGR ddPTM_KYSE-520_SHP099_60min_R1 2 SVEDEMDSPGEEPFYTGQGR 20 0 A0A590UJA3;S4R3W2;A0A590UJU2;A0A590UK38;A0A590UK73;B1AKN7;B1AKN5;A0A590UK09;B1AKN8;Q12857-2;Q12857-3;Q12857;Q12857-4 A0A590UJA3 NFIA Nuclear factor 1;Nuclear factor 1 A-type 1 SVEDEMDS(1)PGEEPFYTGQGR;SVEDEMDS(1)PGEEPFYTGQGR 304.13 8.290799999999998e-45 694760000.0 1224770.0 1108910.0 1026890.0 971920.0 977760.0 1029310.0 891510.0 931310.0 1044590.0 901720.0 True False 1156829.566581535 1055636.2990921543 1093084.9724820917 1064290.9845815955 1054704.1493066042 1022885.6944868413 981632.5310991355 928079.5029793876 854918.7879709953 893731.4623275446 1.294381607165092 1.1811560223503388 1.2230575050310648 1.1908397873896739 1.1801130359222651 1.1445112291593051 1.0983528861596414 1.038432171294933 0.9565723307362712 1.0 19.76948188731536 -6.886447860614367 0.8091097422150113 0.9710616246145454 1.225927139525656 0.9027528836047016 0.03135228735803312 0.1781753334338004 0.22279819609521115 0.025567055807045474 0.014045058986737982 1.2988294859265828e-07 6.886447860614367 0.25486551491111054 SVEERDS(ph)GSFVAFQNIPGSELMSSFAK ddPTM_KYSE-520_SHP099_60min_R1 4 SVEERDSGSFVAFQNIPGSELMSSFAK 27 1 P42166 P42166 TMPO Lamina-associated polypeptide 2, isoform alpha;Thymopoietin;Thymopentin 1 S(0.025)VEERDS(0.488)GS(0.488)FVAFQNIPGSELMSSFAK;S(0.002)VEERDS(0.499)GS(0.499)FVAFQNIPGSELMSSFAK;SVEERDS(0.79)GS(0.21)FVAFQNIPGSELMSSFAK;S(0.027)VEERDS(0.843)GS(0.131)FVAFQNIPGSELMSSFAK 186.07 1.9883e-15 202799000.0 354192.0 396315.0 399790.0 279348.0 314454.0 351370.0 307656.0 326406.0 488685.0 317818.0 True False 334544.2636957532 377275.4325190568 425561.1030866169 305897.1499309616 339199.740801484 349176.9694959163 338756.87091320957 325273.77376973303 399952.1227463465 315002.37977866264 1.0620372580385637 1.197690737397446 1.350977422410709 0.9710947267950837 1.0768164387831727 1.1084899413816065 1.075410513251481 1.032607353627892 1.2696796863165734 1.0 18.265003202357004 -5.2731029639091185 24.98450311885655 1.0789841825626505 1.2029807095058296 0.25528070584845153 0.09953811804591772 1015.0126018566182 2174250.8738276684 0.0277057686638348 0.041452669653082336 5.3320846575183205e-06 5.2731029639091185 0.12399652694317909 SVEGWILFVTGVHEEATEEDIHDK ddPTM_KYSE-520_SHP099_60min_R1 2 SVEGWILFVTGVHEEATEEDIHDK 24 0 Q9Y5S9;Q9Y5S9-2 Q9Y5S9 RBM8A RNA-binding protein 8A 0 ; 102.61 0.0002157 26716000.0 85632.0 93833.0 69727.0 90896.0 83511.0 90237.0 70369.0 93549.0 105031.0 83529.0 False True 80881.82225684011 89325.12183379549 74221.71398714463 99534.72851112118 90082.8405874077 89673.79741128434 77482.58525525805 93224.50035350067 85960.0180160462 82788.99804457855 0.9769634150335833 1.0789491833890477 0.896516635545936 1.2022699979715388 1.0881015921813875 1.0831608007020281 0.9359043723845624 1.1260493852492697 1.038302432042482 1.0 16.337151438081563 -5.24322400978475 24.994922363631566 1.0689409269856116 0.9936237139339145 0.18825605320421168 0.07873083698959557 1555.7383408692406 2134763.5981954737 0.021068439737778187 0.0363856089070091 5.711839430900639e-06 5.24322400978475 -0.07531721305169714 SVESTS(ph)PEPSK ddPTM_KYSE-520_SHP099_60min_R1 5 SVESTSPEPSK 11 0 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;P18583-8 P18583-10 SON Protein SON 1 SVESTS(1)PEPSK;SVEST(0.021)S(0.979)PEPSK;SVEST(0.001)S(0.999)PEPSK;SVEST(0.001)S(0.999)PEPSK;SVEST(0.017)S(0.983)PEPSK 296.56 2.9665e-33 9633000000.0 21308800.0 21633800.0 17976200.0 15042000.0 16201100.0 19798700.0 17486100.0 20212100.0 23322900.0 19388800.0 True False 20126758.385960344 20594479.775004197 19134974.614936937 16471587.157457808 17476034.39835053 19675128.969345115 19253765.635890324 20141988.942639615 19088049.282463674 19217030.31625814 1.0473396802071206 1.0716785807212208 0.9957300529805699 0.8571348895423446 0.9094034879866594 1.0238381605038844 1.001911602314594 1.0481322353745228 0.9932881911683646 1.0 24.19588207217393 -9.30806077235708 14.403476523354888 0.9999986691144878 0.9927411662300482 0.00021716220553069654 0.062189120592780485 0.0 0.0 0.06766710435788119 0.01641168344983749 4.919706876727161e-10 9.30806077235708 -0.007257502884439604 SVETLK ddPTM_KYSE-520_SHP099_60min_R1 4 SVETLK 6 0 P14618;H3BUW1;H3BTJ2;H3BT25;H3BU13;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ;;; 148.28 0.051690999999999994 3564090000.0 3714160.0 5127520.0 3025310.0 2461440.0 4556320.0 5089100.0 3448820.0 4172960.0 4043820.0 4520030.0 False True 3508128.140805603 4881186.242635575 3220326.3232671455 2695374.5175410816 4914876.462085453 5057337.039194208 3797460.3828395894 4158484.9757361836 3309564.2244065856 4479986.050730125 0.7830667553605142 1.089553893106445 0.7188250782036059 0.6016479710024552 1.0970740547918563 1.1288733897664678 0.847650046191706 0.9282361437394331 0.7387443145871425 1.0 22.095062809514687 -5.780376572185158 24.99952628337566 0.9563246125999174 0.8134041428863834 0.19673733182763786 0.15569084898782815 483.38795098093465 638131.2596887031 0.05149548226685815 0.05848424034049898 1.658148520750931e-06 5.780376572185158 -0.142920469713534 SVFALTNGIYPHK ddPTM_KYSE-520_SHP099_60min_R1 1 SVFALTNGIYPHK 13 0 Q02878 Q02878 RPL6 60S ribosomal protein L6 0 96.23 0.0045335 59631000.0 117600.0 108050.0 86373.0 100120.0 146410.0 114470.0 71696.0 88138.0 120660.0 85333.0 False True 111076.49357021203 102859.1158136436 91940.74178168626 109635.37469782446 157931.6340410529 113755.55026950955 78943.73136553005 87832.2698495638 98751.18559107443 84577.0160080694 1.3133177169505996 1.2161591962978444 1.0870653295797796 1.296278585749162 1.8673114930655015 1.344993659490851 0.933394615837453 1.0384886343257111 1.167588905970065 1.0 16.367978040574684 -6.747602315880848 24.00494652742499 1.0380754660270262 1.3564634294076938 0.38668637656986793 0.19698310430318136 171.7137708688053 297894.16363236785 0.0838389268292232 0.06455476376866881 1.7881242134696832e-07 6.747602315880848 0.31838796338066766 SVFGT(ph)PTLETANK ddPTM_KYSE-520_SHP099_60min_R1 1 SVFGTPTLETANK 13 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 SVFGT(0.67)PT(0.315)LET(0.015)ANK 79.639 0.049696 641790000.0 1365500.0 1350200.0 1086100.0 972320.0 1131800.0 1360200.0 1029400.0 1317700.0 1538000.0 1283300.0 True False 1289752.9929432354 1285334.3653084831 1156111.7438214438 1064729.0004613316 1220866.2209388944 1351710.4872594278 1133461.7979758517 1313129.2062534918 1258737.9698248997 1271930.9603922926 1.0140117923896168 1.0105378399721134 0.9089422144932084 0.837096535595725 0.9598525855226854 1.0627231582149155 0.8911346867649689 1.0323903160974184 0.9896275890923169 1.0 20.27858893349769 -6.008266990664281 24.988751783637667 0.9929848908480974 0.9392621523012991 0.13737299995148466 0.06234982356791074 851.5680121803367 2574053.4672026406 0.020894782431186636 0.02261666066325409 9.811445805733972e-07 6.008266990664281 -0.05372273854679832 SVFSQSGNS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 SVFSQSGNSR 10 0 G5EA36;P30260;P30260-2 G5EA36 CDC27 Cell division cycle protein 27 homolog 1 SVFSQSGNS(1)R;SVFSQSGNS(1)R;SVFSQSGNS(1)R 149.02 0.00016654 1081730000.0 837150.0 824360.0 766640.0 753400.0 845880.0 783480.0 743570.0 737830.0 919430.0 747690.0 True False 790711.6206828486 784756.5082104135 816058.8410673699 825002.9094820303 912445.9436011602 778590.0107028503 818737.3121438731 735270.6399408173 752484.6889441524 741066.0482940183 1.0669921021251987 1.0589562293630554 1.101195828558048 1.1132650205487624 1.2312612967517127 1.0506351120729585 1.1048101772151875 0.9921796331561237 1.0154083980455193 1.0 19.49924260441706 -7.257487977260963 23.945143781641868 1.0028455045910476 1.1052561898799733 0.4856439709962421 0.04777979446233993 167.6311225946698 1015839.2698746199 0.024786493536945977 0.013621455727589184 5.527287091313564e-08 7.257487977260963 0.10241068528892572 SVFTSSLFQMEPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SVFTSSLFQMEPSPR 15 0 Q2M1Z3 Q2M1Z3 ARHGAP31 Rho GTPase-activating protein 31 1 SVFTSSLFQMEPS(1)PR 95.428 0.0017374000000000003 144150000.0 150240.0 134550.0 115900.0 113100.0 120470.0 132940.0 91167.0 91163.0 147850.0 104800.0 True False 141905.88770398527 128086.01603633257 123371.09944655672 123848.98999524505 129950.30361946362 132110.272148411 100383.05006417746 90846.7768306041 121004.16699519605 103871.55353316614 1.3661669906446021 1.2331192870378584 1.1877274889044995 1.1923282725881261 1.2510672960905562 1.2718619068908819 0.9664152181196096 0.8746068941926123 1.1649403795290254 1.0 16.664441083484437 -6.76186453661666 24.999970390932265 0.9910411593376282 1.2441389311706323 0.6910046494409405 0.08135111805360278 6.447891273363899 379103.9763608403 0.0323577419577234 0.023342734071278223 1.7303560007147615e-07 6.76186453661666 0.2530977718330042 SVFWASS(ph)PYR ddPTM_KYSE-520_SHP099_60min_R1 1 SVFWASSPYR 10 0 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3 O15027 SEC16A Protein transport protein Sec16A 1 SVFWAS(0.062)S(0.938)PYR 111.26 0.00066444 358410000.0 531680.0 523380.0 467390.0 468150.0 473390.0 460300.0 459460.0 464890.0 551940.0 464080.0 True False 502186.6505221967 498236.0391906041 497518.7072504414 512642.8352455705 510643.09977934544 457427.096960384 505906.70069747843 463277.4050961415 451721.60927513335 459968.6122487764 1.0917846069257144 1.0831957353671136 1.081636211692975 1.1145169944080988 1.1101694467429475 0.9944745897421847 1.0998722243765975 1.0071935187733538 0.9820705092607871 1.0 18.81117589104553 -7.0633631340438825 0.8715554100355174 0.9870082790965897 1.0931881683275197 0.5866410314743041 0.03261075305076634 0.43592599986913544 0.6089753976984446 0.028255345311560834 0.013387637464693852 8.642449806973842e-08 7.0633631340438825 0.10617988923093002 SVFWASS(ph)PYRR ddPTM_KYSE-520_SHP099_60min_R1 1 SVFWASSPYRR 11 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3 O15027 SEC16A Protein transport protein Sec16A 1 SVFWAS(0.125)S(0.875)PYRR 88.087 0.0021257 267640000.0 113150.0 110900.0 82257.0 94851.0 114370.0 79890.0 75558.0 79263.0 91738.0 93786.0 True False 106873.34394106704 105572.19753570642 87559.41783585341 103865.610522007 123370.26832371592 79391.37687630922 83196.14001501788 78988.05515312322 75080.69172678592 92955.12900440393 1.1497304676539548 1.1357328924873498 0.9419535938861976 1.1173736364465285 1.32720237866456 0.8540828002352393 0.8950139804666002 0.8497439140704222 0.8077089723927856 1.0 16.504246850773498 -6.2947338703411155 24.941849334267783 0.8727753774602361 1.1228355228682814 0.6207651706420251 0.09858893338912617 439.34165988858155 329121.9820522092 0.03573671087094835 0.03151851172344657 5.073014803855398e-07 6.2947338703411155 0.2500601454080452 SVGDES(ph)WEQTQEGDVGALYHEQLALK ddPTM_KYSE-520_SHP099_60min_R1 4 SVGDESWEQTQEGDVGALYHEQLALK 26 0 O75691 O75691 UTP20 Small subunit processome component 20 homolog 1 SVGDES(1)WEQTQEGDVGALYHEQLALK;SVGDES(1)WEQTQEGDVGALYHEQLALK;SVGDES(1)WEQTQEGDVGALYHEQLALK;SVGDES(1)WEQTQEGDVGALYHEQLALK 282.44 5.6174e-49 1846670000.0 1120900.0 1126260.0 964650.0 897890.0 976540.0 1006330.0 975700.0 1045080.0 1181660.0 951560.0 True False 1058721.4425412486 1072152.7790492736 1026832.8824945722 983225.1956395274 1053388.1422474543 1000049.1211908401 1074333.2779143562 1041454.8614035058 967100.3312245053 943129.9187024786 1.1225616127179978 1.136802849520774 1.0887501945726086 1.04251299438386 1.1169067181080043 1.0603513910010074 1.139114830958159 1.1042538686889487 1.0254158118056569 1.0 19.84709699417863 -13.999999998823773 0.14506079263329988 0.6550838917444012 1.126761042261702 0.46280817590894696 0.03406040485297684 133.22396382101803 1.1644026258640587 13.12699208512957 0.19757849984741932 1.000000002708363e-14 13.999999998823773 0.47167715051730086 SVGGDS(ph)DTEDMR ddPTM_KYSE-520_SHP099_60min_R1 1 SVGGDSDTEDMR 12 0 Q9UK61;Q9UK61-2;Q9UK61-3;A0A087X0F1;Q9UK61-4 Q9UK61 FAM208A Protein FAM208A 1 SVGGDS(1)DTEDMR 231.69 2.2128e-08 0.0 579330.0 563860.0 521400.0 471340.0 528330.0 493940.0 429380.0 460560.0 581980.0 486960.0 True False 547193.4100342762 536771.3192288853 555010.2782694967 516136.0118864614 569906.5652135066 490857.13724225975 472785.9207449683 458962.42485551257 476307.10252190783 482645.91324914765 1.1337367519608694 1.1121430939202783 1.149932617336788 1.0693885470030402 1.1807964173506094 1.0170129359178337 0.9795709603386002 0.9509298892966915 0.9868665401420945 1.0 18.880605637537442 -6.432427904396531 4.583509578575879 0.9775688981322536 1.1256474423843992 0.8581332594493518 0.02918671872214284 0.07651554155544892 2.758978163671504 0.01013678022376778 0.008754628255522156 3.6946397260067467e-07 6.432427904396531 0.14807854425214562 SVGGSGGGS(ph)FGDNLVTR ddPTM_KYSE-520_SHP099_60min_R1 1 SVGGSGGGSFGDNLVTR 17 0 P02545-3;P02545;P02545-5;P02545-4;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 S(0.008)VGGS(0.008)GGGS(0.984)FGDNLVTR 218.05 4.270899999999999e-18 1278900000.0 232560.0 225190.0 193790.0 169370.0 177950.0 196730.0 177740.0 208490.0 250510.0 173240.0 True False 219659.4332031334 214371.53438291905 206282.0134749628 185466.87387705283 191953.652603001 195502.1350967116 195707.69377523565 207766.79685193193 205023.69884319586 171705.22837868062 1.2792821469518334 1.2484857706845227 1.2013729309396808 1.080146921723444 1.1179254960114802 1.138591625559293 1.1397887858348712 1.210020212044567 1.1940445889686848 1.0 17.389574444127195 -1.0000003879862198 0.017301147936185778 3.5693863754545533e-08 2.604395752698301 0.48231559876744323 0.05666970169965315 4570.91356571739 6.1146415881168235 355.5042784693201 592.9553682778462 0.0999999106629113 1.0000003879862198 2.604395717004437 SVGRPS(ph)PLASGR ddPTM_KYSE-520_SHP099_60min_R1 4 SVGRPSPLASGR 12 1 X6RAB3;Q92738;Q92738-2 X6RAB3 USP6NL USP6 N-terminal-like protein 1 SVGRPS(0.999)PLAS(0.001)GR;S(0.004)VGRPS(0.926)PLAS(0.071)GR;S(0.008)VGRPS(0.982)PLAS(0.01)GR;S(0.001)VGRPS(0.998)PLAS(0.001)GR 109.1 0.00015892 3489600000.0 2031870.0 2048418.0 1885834.0 1944042.0 2017578.0 2142017.0 1990009.0 1974707.0 2466070.0 1762453.0 True False 1919158.1206675724 1950008.9245418962 2007397.8770810855 2128803.1671824614 2176349.9101514868 2128647.8773621367 2191178.5303362366 1967857.2023170788 2018293.8525657295 1746839.0375876834 1.0986462286289724 1.1163071597225023 1.1491601881380116 1.2186601749650932 1.2458789065974512 1.2185712773523292 1.254367736916487 1.1265246310470671 1.1553977264859587 1.0 20.736315246627143 -8.335478587651227 1.416772799807464 1.0005458256911617 1.1842182379266337 0.5147761425536352 0.051967640704025986 1.1339042863058386 3.5382330252732364 0.055793231201762224 0.01640738642175672 4.618717633461881e-09 8.335478587651227 0.18367241223547204 SVICDIS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 4 SVICDISPLR 10 0 Q9UGU0;Q9UGU0-2 Q9UGU0 TCF20 Transcription factor 20 1 SVICDIS(1)PLR;SVICDIS(1)PLR;SVICDIS(1)PLR;SVICDIS(1)PLR 183.08 4.8366e-06 2156420000.0 2489690.0 2355280.0 2111320.0 1751730.0 1974920.0 2117760.0 1823730.0 2187740.0 2547780.0 2238820.0 True False 2351581.9326260295 2242128.813452645 2247419.0654314384 1918213.8925231695 2130334.968242306 2104542.274296816 2008090.4262895838 2180151.2405623524 2085167.3763072048 2218985.796575605 1.0597552883191277 1.0104295470988391 1.0128136326513277 0.8644552369300451 0.9600489428683557 0.9484253020206794 0.9049586659763752 0.982498961429504 0.9396938815584525 1.0 21.081469002395142 -5.032139848832652 19.88985065901551 0.9412861265998659 1.0292250137523646 0.5218571644961192 0.03749586679910774 38.80753974003869 24016.612723468937 0.009763370415796438 0.016962900810672196 9.286672949074172e-06 5.032139848832652 0.08793888715249876 SVIEPLPVT(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 4 SVIEPLPVTPTR 12 0 E9PM17;B3KNX7;Q13153;Q13153-2;H0YCM0 E9PM17 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 SVIEPLPVT(0.995)PT(0.005)R;SVIEPLPVT(1)PTR;S(0.001)VIEPLPVT(0.971)PT(0.028)R;SVIEPLPVT(0.987)PT(0.013)R 222.73 2.7063000000000003e-10 3351120000.0 2284880.0 2596620.0 2016080.0 2075560.0 2041680.0 2644580.0 2119850.0 2671140.0 2943130.0 2736610.0 True False 2158133.1516046454 2471874.4775939216 2146039.7426420534 2272820.598360132 2202348.6004298707 2628074.195262861 2334145.125742283 2661874.4387887646 2408731.782269672 2712365.7644503657 0.7956645006695732 0.9113352299278938 0.7912058804048971 0.8379476795308604 0.8119659336859957 0.9689232292000317 0.860556919105368 0.9813847651657583 0.8880556648515942 1.0 21.37112030936835 -6.2563430443842485 24.987694259140508 0.933668964464939 0.8324914676873436 0.5456346257197717 0.050073492408892424 345.96459575789925 1696291.3250998964 0.015708757930787482 0.015261958858833694 5.541877932484097e-07 6.2563430443842485 -0.10117749677759535 SVIQRGS(ph)GK ddPTM_KYSE-520_SHP099_60min_R1 1 SVIQRGSGK 9 1 A0A384DVU0;Q8IY17-5;Q8IY17-2;Q8IY17-3;Q8IY17 A0A384DVU0 PNPLA6 Neuropathy target esterase 1 SVIQRGS(1)GK 69.65 0.037278 940380000.0 861650.0 730980.0 637290.0 722210.0 846270.0 779040.0 695810.0 785780.0 945410.0 878620.0 True False 813852.5568433088 695862.6235766511 678370.7331000528 790848.621259645 912866.6343823628 774177.7223897856 766149.2652511924 783054.3125824312 773747.3758466571 870836.1103560155 0.9345645491326598 0.799074148742142 0.778987831387379 0.9081486307869456 1.0482645626731812 0.889005075907206 0.8797858243820126 0.8991982570202592 0.8885108996345288 1.0 19.732041706436306 -5.447081604689575 7.973985656375304 0.9289128236247491 0.8347651272667174 0.3152888243837274 0.06338159237645144 0.3991565239013703 38.20278666190923 0.018457490753079866 0.02736498085790517 3.5720571227009877e-06 5.447081604689575 -0.09414769635803177 SVKTS(ph)PTTQSK ddPTM_KYSE-520_SHP099_60min_R1 1 SVKTSPTTQSK 11 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 SVKT(0.005)S(0.93)PT(0.065)TQSK 157.09 4.5348e-05 387130000.0 857400.0 992400.0 853890.0 529610.0 679890.0 740630.0 595680.0 466840.0 990530.0 625410.0 True False 809838.3128154738 944723.6143772319 908933.1156723059 579943.9751669479 733393.4749550688 736007.4534472503 655897.1476765634 465220.6410012749 810674.7212292955 619869.3539616175 1.3064661249015697 1.524068916037636 1.4663301385417216 0.9355906554510167 1.1831420125352428 1.1873589954776569 1.0581215920495026 0.7505140204593524 1.3078154550603784 1.0 19.241604654044508 -5.252056931479779 24.822220939295065 1.060281866897087 1.4414664827922852 0.5543503208956513 0.1527498494022043 443.14641632342597 1172385.9492764273 0.04116894531222862 0.07008242708035564 5.596842279174578e-06 5.252056931479779 0.38118461589519814 SVLEDFFTATEGQY(ph)QPQP ddPTM_KYSE-520_SHP099_60min_R1 7 SVLEDFFTATEGQYQPQP 18 0 Q573B4;P06239;P06239-3 Q573B4 LCK Non-specific protein-tyrosine kinase;Tyrosine-protein kinase Lck 1 SVLEDFFTATEGQY(1)QPQP;SVLEDFFTATEGQY(1)QPQP;SVLEDFFTATEGQY(1)QPQP;SVLEDFFTAT(0.001)EGQY(0.999)QPQP;SVLEDFFTATEGQY(1)QPQP;SVLEDFFTATEGQY(1)QPQP;SVLEDFFTATEGQY(1)QPQP 153.32 9.773700000000002e-07 153963000.0 144439.8 244063.0 210811.0 134595.8 167527.4 235451.0 176241.0 208405.0 330904.0 242570.0 True False 136427.4363603971 232337.8471339683 224400.21436952622 147387.74436429728 180710.8532794829 233981.4629728862 194057.16022640566 207682.0916970927 270820.17501101334 240421.01851660458 0.5674522019836414 0.9663790984976713 0.9333635459747797 0.6130401795719786 0.751643323010888 0.973215505102464 0.8071555533028539 0.8638266861129249 1.1264413431153868 1.0 17.875203501867542 -7.648400719327038 5.0181126802677625 1.0603936427219898 0.8122603769668753 0.3732929356334631 0.132758395331895 0.2270450769021803 8.768300237860213 0.0975689617056271 0.03419507808341653 2.246980381937147e-08 7.648400719327038 -0.24813326575511452 SVLTS(ph)PVANGVNLDYDGLGK ddPTM_KYSE-520_SHP099_60min_R1 1 SVLTSPVANGVNLDYDGLGK 20 0 I3VM54;Q9Y2K7-2;Q9Y2K7;Q9Y2K7-3 I3VM54 KDM2A Lysine-specific demethylase 2A 1 SVLT(0.017)S(0.983)PVANGVNLDYDGLGK 261.63 8.844599999999999e-32 0.0 85775.0 119460.0 73618.0 68749.0 66237.0 99563.0 72765.0 76737.0 115250.0 97480.0 True False 81016.88976177665 113720.96228688424 78363.53407296477 75282.88428985939 71449.47506302317 98941.59038598031 80120.79631796456 76470.8172575505 94323.50521607265 96616.4030382923 0.838541771521622 1.1770357694004903 0.8110789846099601 0.7791936143598958 0.739517026262149 1.0240661758725014 0.8292670167632925 0.791488969292746 0.9762680274765466 1.0 16.559980522782965 -4.801305224688551 24.999981492445833 0.8577203971842646 1.0077903674975865 0.1691932112317982 0.12114755658999174 204.3954122621884 128176.31163141038 0.030437955467747663 0.0633631071638417 1.5801371193750975e-05 4.801305224688551 0.15006997031332192 SVLWWLPVEK ddPTM_KYSE-520_SHP099_60min_R1 1 SVLWWLPVEK 10 0 C9JL30;J3KQJ1;C9J660;F8WA42;Q8NBJ7-2;Q8NBJ7;Q8NBJ7-3;F8WEX5;E9PG02;E9PBT8 C9JL30 SUMF2 Sulfatase-modifying factor 2 0 147.12 0.0013819000000000001 32822000.0 116950.0 145280.0 107180.0 106750.0 190860.0 162680.0 126230.0 90048.0 112310.0 72546.0 False True 110462.55036595487 138300.53073027407 114088.99429406322 116895.48790444233 205879.59615514896 161664.6537769181 138990.56028608076 89735.64450536126 91917.33510470384 71903.29887993401 1.5362654020980053 1.9234239997974485 1.5867004166884189 1.625731916690463 2.863284430091755 2.248362123786141 1.9330206325883712 1.2480045547729897 1.278346564574037 1.0 16.133770341709756 -7.270758679921447 4.378460197018933 1.1801069500098582 1.9806880909981046 0.48493950685424925 0.37080302110766605 0.19858201766566103 9.883134419369101 0.2238653880201046 0.11033488202091209 5.360944610234582e-08 7.270758679921447 0.8005811409882464 SVMEELKR ddPTM_KYSE-520_SHP099_60min_R1 1 SVMEELKR 8 1 P61326;Q96A72;F5H6N1;F5H6P7;F5H3U9 P61326 MAGOH;MAGOHB Protein mago nashi homolog;Protein mago nashi homolog 2 0 137.14 0.0016829999999999998 423820000.0 668330.0 594800.0 357540.0 345830.0 567230.0 555440.0 474070.0 506810.0 501750.0 530700.0 False True 631256.4026171748 566224.9151869986 380587.60048422654 378697.5792224194 611867.7739027833 551973.2929299936 521993.6220773378 505051.9944003432 410644.84808819456 525998.4108783521 1.200110855017708 1.0764764749792175 0.723552757219727 0.7199595500489088 1.1632502327926049 1.0493820542314314 0.9923863100758673 0.9601777951324397 0.7806959861389478 1.0 19.004698915358603 -7.546303947421843 24.34991626294686 0.8837108467962307 0.9807335928314841 0.05467660796045937 0.15929033739418313 623.2629203030694 647849.368019771 0.1151340930227739 0.04352310983222266 2.8424710656977933e-08 7.546303947421843 0.0970227460352534 SVNEILGLAES(ph)SPNEPK ddPTM_KYSE-520_SHP099_60min_R1 1 SVNEILGLAESSPNEPK 17 0 Q9H8G2;Q9H8G2-2 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 SVNEILGLAES(0.771)S(0.229)PNEPK 164.53 3.9203000000000004e-08 301740000.0 395120.0 527190.0 369010.0 297550.0 348750.0 443310.0 333290.0 438320.0 501050.0 503250.0 True False 373201.9059478076 501863.00107167737 392796.9750368756 325829.0625383305 376194.64088393666 440543.1378525053 366982.2057969412 436799.57022465754 410071.95044263016 498791.5965225758 0.7482120960931548 1.0061576910487555 0.7874971787322347 0.6532368724932661 0.7542120667361919 0.8832208499979528 0.7357425593282448 0.8757155759437248 0.822130832398797 1.0 18.92807763375569 -8.592425043298695 0.8737560227005501 1.0010492461436293 0.8008964279630737 0.2914203609723466 0.09189214155948634 3.0235902774071635 3.287402561830612 0.10074192289897804 0.03137573849622162 2.5560830280570902e-09 8.592425043298695 -0.20015281818055564 SVNEILGLAESS(ph)PNEPK ddPTM_KYSE-520_SHP099_60min_R1 12 SVNEILGLAESSPNEPK 17 0 Q9H8G2;Q9H8G2-2 Q9H8G2 CAAP1 Caspase activity and apoptosis inhibitor 1 1 SVNEILGLAES(0.084)S(0.916)PNEPK;SVNEILGLAES(0.336)S(0.664)PNEPK;SVNEILGLAES(0.055)S(0.945)PNEPK;SVNEILGLAES(0.004)S(0.996)PNEPK;SVNEILGLAES(0.051)S(0.949)PNEPK;SVNEILGLAES(0.074)S(0.926)PNEPK;SVNEILGLAES(0.004)S(0.996)PNEPK;SVNEILGLAESS(1)PNEPK;SVNEILGLAES(0.001)S(0.999)PNEPK;SVNEILGLAES(0.011)S(0.989)PNEPK;SVNEILGLAES(0.018)S(0.982)PNEPK;SVNEILGLAES(0.251)S(0.749)PNEPK 334.07 1.0962e-58 4582068000.0 7462074.0 8613970.0 6235184.0 5386479.0 5892073.0 8116370.0 6058227.0 7700730.0 9325210.0 8325960.0 True False 7048137.879944278 8200141.951367432 6637113.937287132 5898408.344656034 6355745.623790514 8065712.72421542 6670651.707757765 7674017.964993886 7631986.933414074 8252198.471898867 0.8540921433173517 0.9936917997417656 0.8042843322162492 0.7147681147929038 0.7701881680904397 0.9774016889779754 0.808348433508146 0.9299361850210155 0.924842871799946 1.0 22.976347088922413 -7.727239547125595 0.915775970224757 0.9970356387932257 0.84190505757007 0.27305969450779044 0.08185270600074215 0.7939147019541687 1.40095135612252 0.08310313628760704 0.030218498976406348 1.8739605881905328e-08 7.727239547125595 -0.1551305812231557 SVNELIYK ddPTM_KYSE-520_SHP099_60min_R1 2 SVNELIYK 8 0 P18124;A8MUD9 P18124 RPL7 60S ribosomal protein L7 0 ; 122.52 0.006910899999999999 1116860000.0 1087400.0 1309320.0 837380.0 685130.0 1026280.0 1362300.0 980390.0 1170060.0 1096470.0 1204350.0 False True 1027079.7543218421 1246418.3018706127 891358.8546553712 750244.5492081551 1107042.3972655681 1353797.3803804726 1079497.3888843434 1166001.334954057 897378.6877593669 1193680.395970121 0.8604311152208542 1.0441809265516426 0.7467315854935785 0.6285137560614964 0.9274194340486417 1.1341372321694387 0.9043437360023162 0.9768120000047676 0.7517746716700114 1.0 20.186985180741573 -5.978856739621142 24.999465626218186 0.9579953572810448 0.8241511031406656 0.18971389510329495 0.13135714656426048 432.162638769293 510979.8900306263 0.04300048512516329 0.048753928678527875 1.0498886974956122e-06 5.978856739621142 -0.13384425414037915 SVNFSLT(ph)PNEIK ddPTM_KYSE-520_SHP099_60min_R1 8 SVNFSLTPNEIK 12 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 SVNFS(0.001)LT(0.999)PNEIK;SVNFS(0.009)LT(0.991)PNEIK;SVNFSLT(1)PNEIK;SVNFS(0.002)LT(0.998)PNEIK;SVNFSLT(1)PNEIK;SVNFSLT(1)PNEIK;SVNFS(0.001)LT(0.999)PNEIK;SVNFSLT(1)PNEIK 320.35 7.465100000000001e-39 9194540000.0 6812250.0 8384480.0 6394420.0 5469700.0 5963270.0 7866400.0 6000990.0 7728850.0 8755610.0 7741380.0 True False 6434360.912616294 7981676.995438941 6806614.544633749 5989538.643474733 6432545.422634999 7817302.879707087 6607628.633218484 7702040.423277159 7165811.934966567 7672797.395902509 0.8385938766026098 1.0402564519299549 0.8871099018291131 0.7806199400851268 0.8383572627722662 1.0188334809781043 0.8611759560792189 1.0038112602048201 0.9339242997336686 1.0 22.87132122963518 -6.252801236018677 24.985656698848157 0.957388888894142 0.8812665897850097 0.2456572664591924 0.0752712035937452 1139.2496168753726 3295256.7853814093 0.02613932336040442 0.025759961037520335 5.587258488366588e-07 6.252801236018677 -0.07612229910913226 SVPGTTSSPLVGDIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 SVPGTTSSPLVGDISPK 17 0 H0Y6S1;B4DRC2;Q9UQR0;Q9UQR0-2 H0Y6S1 SCML2 Sex comb on midleg-like protein 2 1 SVPGTTSSPLVGDIS(1)PK;SVPGTTSSPLVGDIS(1)PK;SVPGTTSSPLVGDIS(1)PK 273.43 7.146699999999999e-30 4385550000.0 1137080.0 1203310.0 921940.0 709220.0 822870.0 1136530.0 886790.0 1113130.0 1219960.0 1179590.0 True False 1074003.905687216 1145501.1813948662 981369.7275561554 776624.055565232 887625.1875101507 1129436.4946956036 976435.3874363754 1109268.8118364955 998446.0166889358 1169139.7503071332 0.9186274826470274 0.9797812289710814 0.8393947150444158 0.664269652418552 0.7592122218725105 0.966040624654923 0.8351742271870114 0.9487906056954187 0.8540005730081831 1.0 20.157015958581834 -8.211627361968967 0.6637789445393242 0.997420133340498 0.8470327081384135 0.17276596096983177 0.09245276315585418 2.021138857242759 1.906915773898882 0.10692104318571019 0.041232705757071955 6.142888578495454e-09 8.211627361968967 -0.15038742520208448 SVPHLQK ddPTM_KYSE-520_SHP099_60min_R1 4 SVPHLQK 7 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;; 131.04 0.0034067 9013340000.0 28217730.0 28377630.0 20928050.0 22423450.0 30440530.0 27775650.0 21998950.0 27561450.0 26168100.0 24886630.0 False True 26652436.2662498 27014326.059108976 22277105.589063924 24554567.946143907 32836026.52807656 27602291.86549575 24222818.555062022 27465845.76284082 21416632.684118964 24666153.819705147 1.0805266382859358 1.09519815114134 0.903144679624406 0.9954761543134424 1.3312179421278365 1.1190350983478015 0.9820265750435337 1.113503384581145 0.8682599176451163 1.0 24.55602943871333 -7.754351918445659 24.993893420956798 0.9341299471189575 1.0762161554044878 0.2114141880561632 0.11074778694446831 245.04959950564262 864188.2260972565 0.08296311652049941 0.029876627939477818 1.7605488564835445e-08 7.754351918445659 0.1420862082855303 SVPNT(ph)PLRPNQQSVVNSSFSELFVK ddPTM_KYSE-520_SHP099_60min_R1 2 SVPNTPLRPNQQSVVNSSFSELFVK 25 1 H0YJ97;Q15643-2;Q15643 H0YJ97 TRIP11 Thyroid receptor-interacting protein 11 1 S(0.498)VPNT(0.502)PLRPNQQSVVNSSFSELFVK;S(0.001)VPNT(0.999)PLRPNQQSVVNSSFSELFVK 128.3 0.00026483 270140000.0 181425.0 219298.0 205535.0 186473.0 188252.0 207696.0 166273.0 215666.0 255750.0 203570.0 True False 171360.9935882289 208762.59490699132 218784.11496762728 204195.3378548481 203066.3613926392 206399.6922230806 183081.49750810047 214917.90498282269 209312.24693284667 201766.5281750633 0.8493033762247575 1.0346740700511925 1.0843429628615042 1.012037723510202 1.0064422638845631 1.0229629963399942 0.9073928126931405 1.0651811622408875 1.0373982683155272 1.0 17.622327334504963 -4.258200799202299 24.753166321003977 1.0190517739745302 0.8493033033695754 0.5639341163080378 0.04475008304091122 206.04375942988142 1574750.1106842896 0.011472928716924624 0.07935394720338174 5.518222412750701e-05 4.258200799202299 -0.1697484706049548 SVPSIAAATGTHS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 SVPSIAAATGTHSR 14 0 Q8IY63;Q8IY63-2 Q8IY63 AMOTL1 Angiomotin-like protein 1 1 SVPSIAAAT(0.003)GT(0.129)HS(0.867)R;SVPSIAAAT(0.002)GT(0.009)HS(0.989)R 108.06 0.0010755 366850000.0 596170.0 614690.0 500800.0 607570.0 497440.0 471180.0 433780.0 485370.0 618970.0 510220.0 True False 563099.2616645684 585159.3697314999 533082.3693083306 665313.2701274182 536585.697953564 468239.1908446533 477630.7156848304 483686.3647562094 506580.65096392646 505699.84774515283 1.1135049064684355 1.1571278345062717 1.0541477749801047 1.3156287728658809 1.0610754587847455 0.9259231398476161 0.9444944818839102 0.9564692710763143 1.0017417510064537 1.0 18.947921818539054 -6.0000203049865 24.999999999997833 0.9652137807664611 1.1568254938564766 0.6654119422156259 0.06498603234353209 0.43087472410542854 530987.7184340226 0.019861424110724783 0.022294188225428162 9.999532471337205e-07 6.0000203049865 0.19161171309001546 SVPTAYRVS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 SVPTAYRVSR 10 1 Q12872-2;Q12872 Q12872-2 SFSWAP Splicing factor, suppressor of white-apricot homolog 1 SVPTAYRVS(1)R;SVPTAYRVS(1)R;SVPTAYRVS(1)R;SVPTAYRVS(1)R 171.99 2.6163000000000003e-05 5409920000.0 3915440.0 3628380.0 3545290.0 3613770.0 3460160.0 3423200.0 3483780.0 3680220.0 4435720.0 3173200.0 True False 3698242.737963874 3454067.17849059 3773825.0660645626 3957221.614280431 3732454.9063826916 3401834.539028431 3835954.4808163135 3667454.1757898093 3630305.0634016297 3145087.916712243 1.1758789693325578 1.098241852043787 1.1999108342922185 1.258222892038313 1.1867569381921952 1.0816341638502052 1.2196652629114026 1.1660895570841874 1.1542777688696901 1.0 21.584668915596296 -8.422554100859282 2.0427872417127597 1.0000133249756973 1.1734177281456752 0.5232406564228915 0.049330179298645874 2.5852857457436733 11.465440710402591 0.049461382785410096 0.013647275103000686 3.779600511930328e-09 8.422554100859282 0.17340440316997796 SVPTFTVIPEGPRS(ph)PS(ph)PLMVVDNEEEPMEGVPLEQYR ddPTM_KYSE-520_SHP099_60min_R1 3 SVPTFTVIPEGPRSPSPLMVVDNEEEPMEGVPLEQYR 37 1 B8ZZ93;B8ZZH7;F8WCL7;J3KQ70;Q9C086;H7C171;C9JKY0 B8ZZ93 INO80B;INO80B-WBP1 INO80 complex subunit B 2 S(0.161)VPT(0.181)FT(0.202)VIPEGPRS(0.743)PS(0.712)PLMVVDNEEEPMEGVPLEQYR;S(0.142)VPT(0.162)FT(0.172)VIPEGPRS(0.792)PS(0.731)PLMVVDNEEEPMEGVPLEQYR;SVPTFTVIPEGPRS(1)PS(1)PLMVVDNEEEPMEGVPLEQYR 134.42 2.1186e-06 83097000.0 69207.0 71721.1 61338.0 65773.0 60178.0 66412.0 70300.4 71787.0 88845.0 63307.0 True False 65367.94974926578 68275.51070043418 65291.94562426997 72024.04614462645 64913.6662340174 65997.49807371935 77407.05049778656 71537.98765221168 72712.98760019065 62746.14923210069 1.0417842457146962 1.088122722047534 1.0405729502658765 1.1478640048205417 1.0345442234853166 1.0518175040446194 1.233654199422734 1.140117577376575 1.1588438253194184 1.0 15.937239302290626 -6.6998873605813944 24.999999074133793 1.1448341395594188 1.0693280840068908 0.20192360333195325 0.06221554099608063 91.14801043487186 37020.045164529016 0.022446610158424505 0.01738706057389998 1.9957798770014936e-07 6.6998873605813944 -0.07550605555252798 SVPTWLK ddPTM_KYSE-520_SHP099_60min_R1 2 SVPTWLK 7 0 P62277;J3KMX5;E9PS50 P62277 RPS13 40S ribosomal protein S13 0 ; 114.6 0.021074000000000002 3051900000.0 4002000.0 4066700.0 2782000.0 2770600.0 4015600.0 4146100.0 3006600.0 3622400.0 3316500.0 3308600.0 False True 3780001.082210787 3871329.6277588536 2961332.1713573826 3033916.9909887346 4331604.874361397 4120222.651982293 3310536.469588295 3609834.739874517 2714307.202161427 3279288.378051852 1.1526894394253904 1.1805395504919636 0.9030410961041005 0.9251754165003059 1.3208978214153588 1.2564380368493302 1.0095289245513097 1.1007981987906275 0.8277122623091578 1.0 21.64495134610595 -7.742997990912463 24.14596009972967 0.913856234330176 1.104764942698606 0.25298803454361163 0.13214718505329748 209.47380969177706 274274.57574697415 0.09607055670167033 0.03614250217014139 1.8071824861894764e-08 7.742997990912463 0.19090870836842988 SVPVNNLPERS(ph)PTDSPR ddPTM_KYSE-520_SHP099_60min_R1 1 SVPVNNLPERSPTDSPR 17 1 P49454 P49454 CENPF Centromere protein F 1 SVPVNNLPERS(0.489)PT(0.489)DS(0.021)PR 164.97 2.9783999999999997e-06 0.0 40202.0 91439.0 61173.0 59423.0 75922.0 48300.0 59156.0 78920.0 93489.0 65826.0 True False 37971.914919299874 87046.13318726285 65116.30946026068 65070.54405382355 81896.62946291121 47998.54178402468 65136.06578692381 78646.24494006643 76513.75426590371 65242.83285185299 0.5820089848876239 1.3341869042522825 0.998060731178249 0.9973592685893843 1.2552586373567503 0.7356906450247961 0.9983635433922434 1.2054388428940324 1.1727534032687335 1.0 15.993531804955943 -7.243328324408377 22.253523390764077 1.1418220662685639 1.0008977421215892 0.08021065700224583 0.21135942642342367 491.95743928579094 604482.7626952531 0.09591289695260098 0.05515154035097831 5.7104676501066976e-08 7.243328324408377 -0.14092432414697464 SVS(ph)CDNVSK ddPTM_KYSE-520_SHP099_60min_R1 7 SVSCDNVSK 9 0 A0A087WXN4;Q96CB8 A0A087WXN4 INTS12 Integrator complex subunit 12 1 SVS(1)CDNVSK;SVS(1)CDNVSK;SVS(1)CDNVSK;SVS(1)CDNVSK;SVS(1)CDNVSK;SVS(1)CDNVSK;S(0.001)VS(0.999)CDNVSK 207.54 6.0217e-08 11351420000.0 14769520.0 13350790.0 12740350.0 12059350.0 12997270.0 12570720.0 12155280.0 13698030.0 15927070.0 12825810.0 True False 13950225.283291807 12709398.008455658 13561613.34628074 13205466.998224221 14020081.204649655 12492261.47360818 13384054.326500773 13650514.731074238 13035115.576761419 12712183.301729176 1.097390192713334 0.9997808957590205 1.066820153894101 1.038804010671239 1.1028853873388194 0.9826999168513342 1.0528525280688963 1.0738135540586033 1.0254033683567414 1.0 23.599708496920382 -6.254883794129064 24.994758627166547 1.033185886714756 1.056802605908695 0.1663512829345054 0.036324702938807366 1366.6299278445856 5210605.216640065 0.011894652583291355 0.011623163175791037 5.560530226459373e-07 6.254883794129064 0.02361671919393893 SVS(ph)HGSNHTQKPDEQR ddPTM_KYSE-520_SHP099_60min_R1 1 SVSHGSNHTQKPDEQR 16 1 E7EPN9;Q9Y520-2;Q9Y520-6;Q9Y520-4;Q9Y520-5;Q9Y520;Q9Y520-7;Q9Y520-3 E7EPN9 PRRC2C Protein PRRC2C 1 S(0.064)VS(0.93)HGS(0.003)NHT(0.003)QKPDEQR 69.747 0.013896 61173000.0 20897.0 25101.0 34647.0 7043.2 21457.0 32085.0 16774.0 11788.0 19065.0 32657.0 True False 19737.80175286327 23895.110282630863 36880.401057160045 7712.583610384702 23145.543826370274 31884.745613673553 18469.679618464073 11747.110179339887 15603.276589539482 32367.68438676153 0.6097996235077009 0.7382397207383803 1.1394204360273676 0.23828036377972003 0.7150818560204716 0.9850796007734954 0.57062097485164 0.36292711084838947 0.482063418658434 1.0 14.98226653708813 -6.966297738026399 24.99670607531662 0.5468515221958524 0.7360178847303868 0.039938533551136524 0.2706014653079893 449.53829190417764 333418.2800513587 0.11233578370688456 0.07573635810135568 1.0806928097957044e-07 6.966297738026399 0.18916636253453434 SVS(ph)LRK ddPTM_KYSE-520_SHP099_60min_R1 2 SVSLRK 6 1 Q9P206-2;Q9P206;Q9P206-3 Q9P206-2 KIAA1522 Uncharacterized protein KIAA1522 1 S(0.004)VS(0.996)LRK;S(0.004)VS(0.996)LRK 78.77 0.017699 1196000000.0 874010.0 990280.0 976260.0 1035790.0 1033420.0 886160.0 945120.0 959730.0 1182950.0 970890.0 True False 825526.9230042609 942705.4623594153 1039191.2816712299 1134231.1701783813 1114744.274644526 880629.146735638 1040661.9530823146 956400.9206326661 968156.0997427608 962288.6699409899 0.857878668627455 0.9796493420391456 1.0799163641144771 1.1786807905032648 1.1584302189829223 0.9151403048210477 1.0814446699721931 0.9938815144641733 1.0060973697239215 1.0 19.876110216893952 -4.406539127578419 2.8494545638389868 1.0555050918585425 0.8500968413087098 0.3839297218621923 0.07513320615013229 0.34914573103741936 4.581786097449858 0.020875215475498025 0.1387779242322892 3.9215781344800014e-05 4.406539127578419 -0.2054082505498327 SVS(ph)NGALR ddPTM_KYSE-520_SHP099_60min_R1 2 SVSNGALR 8 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 S(0.034)VS(0.966)NGALR;S(0.068)VS(0.932)NGALR 133.91 0.00075497 1565960000.0 1347860.0 1188360.0 1105480.0 1152640.0 1144080.0 1151280.0 1095470.0 1236410.0 1352090.0 1160850.0 True False 1273091.5189077044 1131269.4018352737 1176741.0096305383 1262186.5590461476 1234112.5870752533 1144094.4344743688 1206210.7983569107 1232121.1822902637 1106584.539415182 1150565.7721276325 1.1064917362816178 0.9832287985964715 1.022749883698089 1.0970138253914032 1.0726136801315804 0.9943755169760553 1.0483631858145572 1.0708828753108295 0.9617742559548594 1.0 20.13391202694975 -7.764035857161731 24.99707238770437 0.9808871119820062 1.046850114387586 0.3262021255288581 0.039280824193419404 85.52732298593106 823313.7438141081 0.03268572268399164 0.009922089112593542 1.721726416211708e-08 7.764035857161731 0.06596300240557973 SVS(ph)PESNDSISEELNHFKPIVCS(ph)PCT(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 3 SVSPESNDSISEELNHFKPIVCSPCTPPK 29 1 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 3 S(0.145)VS(0.855)PESNDSISEELNHFKPIVCS(1)PCT(1)PPK;S(0.21)VS(0.707)PES(0.055)NDS(0.02)IS(0.007)EELNHFKPIVCS(1)PCT(1)PPK;S(0.156)VS(0.826)PES(0.014)NDS(0.002)IS(0.002)EELNHFKPIVCS(1)PCT(1)PPK 136.33 1.7054e-06 1931310000.0 638460.0 711400.0 571210.0 759630.0 638130.0 583380.0 535640.0 622000.0 748030.0 606350.0 True False 603043.3510615443 677223.27616683 608031.1105683149 831825.0068089128 688347.2005369652 579738.9090261766 589787.7185426306 619842.4271758916 612206.6083017676 600978.2107331611 1.0034362981743778 1.1268682692183698 1.0117356997461684 1.384118412203549 1.1453779658620544 0.9646587824189604 0.981379537576115 1.0313891853412076 1.0186835352231964 1.0 19.196953159487965 -6.253285167339565 23.821684144053748 1.0000688643837128 1.140962920638089 0.3168231061271204 0.09893767451885883 412.50947409996974 1205102.587726686 0.034246894091294056 0.03363251966150467 5.581036112508443e-07 6.253285167339565 0.14089405625437612 SVS(ph)PLVWCR ddPTM_KYSE-520_SHP099_60min_R1 2 SVSPLVWCR 9 0 Q9P270 Q9P270 SLAIN2 SLAIN motif-containing protein 2 1 S(0.081)VS(0.919)PLVWCR;S(0.124)VS(0.876)PLVWCR 78.556 0.018111000000000002 238010000.0 655280.0 649230.0 628170.0 566530.0 638850.0 635860.0 634270.0 678070.0 815410.0 642490.0 True False 618930.3121317048 618040.0162859019 668662.8433075359 620372.8408665451 689123.8604407258 631891.361879709 698388.2014786704 675717.9334327283 667352.0988133426 636798.0384496556 0.9719412981210628 0.9705432161672138 1.0500391064888612 0.9742065826347405 1.0821701997048583 0.99229476808394 1.0967185187613984 1.0611181138023396 1.0479807702267327 1.0 19.280476366343322 -4.638574213237064 0.6818183749196218 1.0499912377107714 0.9369752246442354 0.3020408121614565 0.038217177356225464 2.2789634124169402 1.123421352839467 0.017059376275194334 0.1850970982468963 2.2984009196843478e-05 4.638574213237064 -0.11301601306653597 SVS(ph)PPPKR ddPTM_KYSE-520_SHP099_60min_R1 4 SVSPPPKR 8 1 Q13247 Q13247 SRSF6 Serine/arginine-rich splicing factor 6 1 S(0.211)VS(0.789)PPPKR;S(0.177)VS(0.823)PPPKR;S(0.117)VS(0.883)PPPKR;S(0.154)VS(0.846)PPPKR 86.882 0.0032283 22984800000.0 6131320.0 6114720.0 5126420.0 5692610.0 5868400.0 6422770.0 5600090.0 6120190.0 8267060.0 5167610.0 True False 5791203.457116605 5820959.672818162 5456877.235762017 6233633.942854389 6330209.693371461 6382683.110024436 6166201.748811529 6098960.48935308 6765970.299623301 5121828.995739741 1.1306905134735343 1.1365001989835948 1.065415741193422 1.2170718600795594 1.2359275756056738 1.2461726299986693 1.2039062127885334 1.190777844091652 1.3210066765702508 1.0 22.2882276553098 -5.278699343586096 23.982472333599205 1.2133905381086234 1.1134319594794375 0.20978553483765694 0.07902514707334261 615.2392242896839 854864.7189531943 0.020709260024611945 0.03081148012409316 5.263815473727248e-06 5.278699343586096 -0.09995857862918589 SVS(ph)PS(ph)PVPLLFQPDQNAPPIR ddPTM_KYSE-520_SHP099_60min_R1 1 SVSPSPVPLLFQPDQNAPPIR 21 0 Q02241-2;Q02241-3 Q02241-2 KIF23 Kinesin-like protein KIF23 2 S(0.615)VS(0.716)PS(0.669)PVPLLFQPDQNAPPIR 97.346 0.00096148 32864000.0 32886.0 30948.0 34454.0 29508.0 33529.0 33454.0 32517.0 33554.0 43046.0 32770.0 True False 31061.748023384294 29461.211626104938 36674.959968349125 32312.431448096282 36167.541546086075 33245.2011768688 35804.13569533782 33437.60900556246 35229.9315013541 32479.683294674214 0.9563439317303188 0.9070658527922215 1.129166181690042 0.9948505702761776 1.1135435409869459 1.0235691301312693 1.102354828109076 1.029493074245749 1.084675955172594 1.0 14.987249944602386 -4.749105210137979 24.99999931289243 1.0605989660555384 0.9317048366217602 0.5507813798547364 0.04623408265762475 145.5527849643131 295014.1685323816 0.010510936501595517 0.027375998233257075 1.781947029050937e-05 4.749105210137979 -0.1288941294337782 SVS(ph)PSPVPLLFQPDQNAPPIR ddPTM_KYSE-520_SHP099_60min_R1 10 SVSPSPVPLLFQPDQNAPPIR 21 0 Q02241-2;Q02241-3 Q02241-2 KIF23 Kinesin-like protein KIF23 1 S(0.114)VS(0.443)PS(0.443)PVPLLFQPDQNAPPIR;S(0.161)VS(0.761)PS(0.079)PVPLLFQPDQNAPPIR;S(0.007)VS(0.992)PS(0.001)PVPLLFQPDQNAPPIR;S(0.013)VS(0.955)PS(0.032)PVPLLFQPDQNAPPIR;S(0.012)VS(0.987)PSPVPLLFQPDQNAPPIR;S(0.084)VS(0.916)PSPVPLLFQPDQNAPPIR;S(0.137)VS(0.863)PSPVPLLFQPDQNAPPIR;S(0.133)VS(0.852)PS(0.016)PVPLLFQPDQNAPPIR;S(0.002)VS(0.997)PS(0.001)PVPLLFQPDQNAPPIR;S(0.003)VS(0.997)PSPVPLLFQPDQNAPPIR 337.45 4.0014999999999995e-65 14659703000.0 2021018.0 2382363.0 1833310.0 1593841.0 1659273.0 2149036.0 1799785.0 2158773.0 2314351.0 2320230.0 True False 1908908.102740501 2267910.7054802338 1951488.0959997142 1745319.1694342277 1789848.345128066 2135623.0691795717 1981724.8320089066 2151284.7203244045 1894123.1984409783 2299674.5673116255 0.8300774943874168 0.9861876709501013 0.8485931547614802 0.7589418060462997 0.7783050569717964 0.9286631680569334 0.8617414221028632 0.9354735452152727 0.8236483654534014 1.0 21.13299828556158 -6.29106696126355 24.890603829731017 0.902862154036037 0.8444465401180403 0.1867467590317874 0.07150571175288263 1489.0186078444328 1250943.2680559938 0.02644200465840707 0.023323550641411582 5.116029484661813e-07 6.29106696126355 -0.058415613917996656 SVS(ph)PTFLNPSDENLK ddPTM_KYSE-520_SHP099_60min_R1 8 SVSPTFLNPSDENLK 15 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 SVS(0.999)PTFLNPSDENLK;SVS(1)PTFLNPSDENLK;S(0.002)VS(0.998)PT(0.001)FLNPSDENLK;S(0.278)VS(0.721)PT(0.001)FLNPSDENLK;S(0.12)VS(0.866)PT(0.014)FLNPSDENLK;S(0.001)VS(0.999)PTFLNPSDENLK;SVS(1)PTFLNPSDENLK;S(0.007)VS(0.99)PT(0.003)FLNPSDENLK 407.58 1.1775999999999997e-96 14796610000.0 6484660.0 7283870.0 5471480.0 4651840.0 5149190.0 6970760.0 5291330.0 6324150.0 7452810.0 6775200.0 True False 6124942.982950781 6933941.951888234 5824180.355477536 5093949.4749733005 5554401.958116594 6927252.901167865 5826229.274804315 6302212.999717698 6099567.574051172 6715176.999025846 0.9121044737673052 1.0325776897457988 0.8673159853154184 0.7585726296882818 0.8271415569421859 1.0315815803772237 0.8676211030103169 0.9385028869130247 0.9083256591652046 1.0 22.67899399611784 -6.235427346504004 24.994170073630542 0.9402636400496043 0.8806446371385868 0.16298512653137687 0.07760326177081284 1854.444960436913 1781880.533530434 0.027952779290689945 0.02794331296437856 5.815307089420493e-07 6.235427346504004 -0.059619002911017516 SVS(ph)SDSLGPPRPAPART(ph)PTQPPPEPGDLPTIEEALQIIHSAEPR ddPTM_KYSE-520_SHP099_60min_R1 1 SVSSDSLGPPRPAPARTPTQPPPEPGDLPTIEEALQIIHSAEPR 44 2 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 2 S(0.467)VS(0.504)S(0.033)DS(0.389)LGPPRPAPART(0.581)PT(0.025)QPPPEPGDLPTIEEALQIIHSAEPR 92.368 0.00013597 21582000.0 6746.0 6644.4 4722.7 5145.6 3535.1 5089.6 4623.8 4990.9 6158.3 5335.7 True False 6371.785932182399 6325.1930505522705 5027.1327985871685 5634.636276918948 3813.292258032418 5057.833918508743 5091.218827939321 4973.587732784818 5040.107958109671 5288.429849111784 1.2048540141366477 1.1960436709989857 0.9505908071053449 1.0654648804437314 0.7210632204325973 0.9563961445679816 0.9627089652696091 0.94046586126507 0.953044306516835 1.0 12.368623730036125 -4.765218422646237 4.987861451908659 0.9378217866516689 1.205596570162149 0.6063439858375524 0.082697752449441 0.10828111244754557 7.39403937698962 0.021674165043264578 0.05331397232310148 1.7170446051643423e-05 4.765218422646237 0.26777478351048 SVS(ph)SMSEFESLLDCSPYLAGGDAR ddPTM_KYSE-520_SHP099_60min_R1 1 SVSSMSEFESLLDCSPYLAGGDAR 24 0 O94964-2;H0YDM2;O94964-3;O94964;X6R3R3;O94964-4 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 S(0.273)VS(0.363)S(0.363)MS(0.001)EFESLLDCSPYLAGGDAR 216.82 3.1995999999999998e-21 38120000.0 15986.0 15602.0 13147.0 10990.0 11108.0 13657.0 13679.0 15922.0 19248.0 15541.0 True False 15099.224712699064 14852.456500920553 13994.47665594375 12034.486295736015 11982.136404125515 13571.761597193072 15061.806814174908 15866.770298222737 15753.048402594053 15403.318830715047 0.9802578832939819 0.9642374259827664 0.9085364530686731 0.7812917740648594 0.777893162883345 0.8810933375040091 0.9778286731389897 1.0300877669676967 1.0227048193783814 1.0 13.910953609999133 -6.862014718813646 3.532450649257386 1.0174886406514783 0.8774501946960102 0.4995054179553601 0.06229766723459105 0.22942700421217496 5.546762185813458 0.03272226167551301 0.02138289481116439 1.3739954077041442e-07 6.862014718813646 -0.1400384459554681 SVS(ph)SPTSSNTPTPTK ddPTM_KYSE-520_SHP099_60min_R1 1 SVSSPTSSNTPTPTK 15 0 Q5M775-4;Q5M775;Q5M775-5;Q5M775-3;Q5M775-2 Q5M775-4 SPECC1 Cytospin-B 1 S(0.356)VS(0.643)SPTSSNTPTPTK 247.99 5.0694e-19 338630000.0 664450.0 770740.0 605020.0 471310.0 573950.0 634790.0 523930.0 594950.0 768550.0 757950.0 True False 627591.6339517637 733712.493495674 644020.5572662264 516103.1606954819 619116.5996712135 630828.0401466048 576893.9574640441 592886.2573123734 629000.693568873 751235.1526761769 0.8354130284186658 0.9766748678917904 0.8572822437448347 0.68700613763471 0.8241315618228083 0.8397211417747991 0.767927266727249 0.7892152746051535 0.8372886856108109 1.0 19.518905047286097 -4.99932940326986 24.997328887317487 0.8077366853690511 0.9087776237482569 0.13670115496368396 0.08101012130121234 33.71414237515277 1256504.961082058 0.019842671914403965 0.04073908827854826 1.0015452987797837e-05 4.99932940326986 0.1010409383792058 SVS(ph)TTNIAGHFNDESPLGLR ddPTM_KYSE-520_SHP099_60min_R1 7 SVSTTNIAGHFNDESPLGLR 20 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 S(0.118)VS(0.397)T(0.243)T(0.243)NIAGHFNDESPLGLR;S(0.024)VS(0.856)T(0.102)T(0.018)NIAGHFNDESPLGLR;S(0.037)VS(0.936)T(0.026)T(0.002)NIAGHFNDESPLGLR;S(0.001)VS(0.973)T(0.025)T(0.002)NIAGHFNDESPLGLR;SVS(0.98)T(0.019)T(0.001)NIAGHFNDESPLGLR;S(0.187)VS(0.79)T(0.02)T(0.003)NIAGHFNDESPLGLR;S(0.01)VS(0.976)T(0.014)TNIAGHFNDESPLGLR 331.99 5.856799999999999e-65 16289940000.0 2800380.0 4210340.0 3142770.0 3682640.0 3524010.0 2975880.0 2992830.0 3750840.0 4119360.0 4197420.0 True False 2645037.3389808703 4008068.9465508163 3345357.982809796 4032636.998373911 3801329.5381258833 2957306.4290733594 3295374.46360605 3737829.2114926414 3371388.0646150196 4160234.124343346 0.6357905011892485 0.9634238907608241 0.8041273358233966 0.9693293400910279 0.9137297143645462 0.7108509619131453 0.7921127429640018 0.8984660718061446 0.8103842148901084 1.0 21.988233290124345 -10.694579600671041 2.636309381699693 1.025110767705382 0.839608363166154 0.19239925007642122 0.10178654106953956 48398397.60752036 39868619.161606975 8083471.009534629 0.02537575127648489 2.020321098817833e-11 10.694579600671041 -0.18550240453922795 SVS(ph)VDESRPELIFR ddPTM_KYSE-520_SHP099_60min_R1 5 SVSVDESRPELIFR 14 1 Q96BY7 Q96BY7 ATG2B Autophagy-related protein 2 homolog B 1 SVS(1)VDESRPELIFR;SVS(1)VDESRPELIFR;S(0.002)VS(0.998)VDESRPELIFR;S(0.168)VS(0.832)VDESRPELIFR;S(0.021)VS(0.979)VDESRPELIFR 256.71 9.890600000000001e-21 3131250000.0 2083500.0 1853740.0 1538710.0 1484020.0 1604790.0 2143440.0 2091710.0 2335680.0 2537640.0 2222200.0 True False 1967924.1016457223 1764683.5478795343 1637897.7086230486 1625060.8146131171 1731077.8429939316 2130061.9958913014 2303160.459922347 2327578.071231809 2076868.5446986097 2202513.0368454414 0.8934903306925664 0.8012136674600617 0.7436494954731049 0.7378212012495587 0.7859557759863592 0.9671052839451483 1.045696629891943 1.0567828804162234 0.9429540302168715 1.0 21.070719127918945 -6.3326288201426175 3.7211932961257417 1.0147669574956302 0.7862001304499994 0.8207048798657216 0.04931617360724498 0.0991226596439286 2.6879232990753543 0.019081715166389044 0.016916629153590428 4.649124536871778e-07 6.3326288201426175 -0.2285668270456308 SVS(ph)VDSGEQR ddPTM_KYSE-520_SHP099_60min_R1 4 SVSVDSGEQR 10 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 SVS(0.942)VDS(0.057)GEQR;S(0.002)VS(0.997)VDS(0.001)GEQR;SVS(0.999)VDSGEQR;SVS(1)VDSGEQR 142.1 0.00022725 2223670000.0 2350680.0 2312010.0 2801880.0 2888080.0 3029180.0 4596630.0 5245620.0 6207600.0 6929800.0 5751950.0 True False 2220283.0944355954 2200937.5692022396 2982493.667966506 3162562.254867082 3267559.2323234533 4567940.727136674 5775898.4619176965 6186067.284464732 5671523.006041997 5700992.197949387 0.3894555574438811 0.3860621963302991 0.5231534379295049 0.5547389200084569 0.573156236470342 0.8012536359512534 1.0131391626873745 1.0850860814525976 0.9948308661222182 1.0 22.442781596406896 -6.329073006306194 1.178722454863822 1.0527204842931481 0.4381365249483179 0.9614828574749185 0.05142886002907644 0.08729613380486229 0.2493446307214113 0.0294498017317814 0.02495822417745405 4.687345797240203e-07 6.329073006306194 -0.6145839593448302 down SVSDQFYR ddPTM_KYSE-520_SHP099_60min_R1 1 SVSDQFYR 8 0 P55010;H0YN40;H0YK29;H0YK11;H0YMJ8;H0YM54;H0YLZ1 P55010 EIF5 Eukaryotic translation initiation factor 5 0 83.206 0.06754600000000001 0.0 182070.0 220330.0 157740.0 176710.0 208800.0 223390.0 247370.0 244910.0 283480.0 193820.0 False True 171970.2141524533 209745.0160779273 167908.17279292355 193504.465270201 225231.37209051184 221995.74014768694 272376.57369854895 244060.46437242397 232007.17794926016 192102.90558967815 0.8951984022551578 1.0918367706833743 0.8740532699258943 1.0072958796548164 1.1724516680221089 1.155608445724701 1.4178680580726415 1.2704673238713238 1.2077234190554904 1.0 17.551519814617336 -5.843284890194981 2.1684560554735826 1.239247357672064 0.9617667019386592 0.5128129408850712 0.11273005684848626 0.2333507595123884 2.2485429191422073 0.038015919715855336 0.046215872273273485 1.434548084162359e-06 5.843284890194981 -0.27748065573340475 SVSEINS(ph)DDELSGK ddPTM_KYSE-520_SHP099_60min_R1 4 SVSEINSDDELSGK 14 0 F8WF45;A0A2R8Y7M0;P82094;P82094-2 F8WF45 TMF1 TATA element modulatory factor 1 SVSEINS(1)DDELSGK;SVSEINS(1)DDELSGK;SVS(0.003)EINS(0.997)DDELSGK;S(0.021)VS(0.105)EINS(0.825)DDELS(0.049)GK 241.8 1.4422e-18 5547270000.0 9188400.0 8284300.0 7773700.0 7206800.0 7818700.0 7984300.0 7948100.0 8242100.0 9830500.0 7563200.0 True False 8678701.135378713 7886309.793012192 8274805.140359762 7891732.105196565 8433987.207682412 7934467.022074291 8751571.513980832 8213510.0788205955 8045529.0067384085 7496195.932080566 1.1577473713350424 1.0520415774169005 1.1038672435104153 1.0527649192603505 1.1251022897611966 1.0584657997155742 1.1674683523849458 1.0956904212802425 1.073281579034898 1.0 22.83772723130564 -8.147190307750213 2.7082134849562154 1.0001093950215638 1.0997894126853538 0.3886192090201578 0.03848919340379322 0.5987463386761097 8.275879830057141 0.03507088742211292 0.009435019347939439 7.1254072651001515e-09 8.147190307750213 0.09968001766378998 SVSGS(ph)PEPAAK ddPTM_KYSE-520_SHP099_60min_R1 4 SVSGSPEPAAK 11 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 SVSGS(1)PEPAAK;SVSGS(1)PEPAAK;SVSGS(1)PEPAAK;SVSGS(1)PEPAAK 238.2 3.5236000000000004e-14 4407160000.0 8304400.0 8521500.0 6321500.0 5255500.0 6100300.0 7643400.0 6199500.0 6592100.0 8468800.0 6782000.0 True False 7843738.377589018 8112114.348967735 6728994.004757615 5754981.139876314 6580358.904040956 7595694.705424728 6826205.961289378 6569233.5437076995 6931079.401074849 6721916.756316163 1.1668901389203832 1.2068156514055743 1.0010528616610437 0.8561518014141904 0.9789408501463227 1.1299894034372757 1.0155148016189313 0.9772857626561655 1.0311165181511879 1.0 22.680441245859782 -4.765795279304243 24.95823890496842 0.9974299292721684 1.1868529284286593 0.5825332672896328 0.06368497839944892 71.39936547689666 409110.8085880532 0.01811742821056695 0.039946052806133704 1.7147654348524584e-05 4.765795279304243 0.18942299915649086 SVSS(ph)MSEFESLLDCSPYLAGGDAR ddPTM_KYSE-520_SHP099_60min_R1 1 SVSSMSEFESLLDCSPYLAGGDAR 24 0 O94964-2;H0YDM2;O94964-3;O94964;X6R3R3;O94964-4 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 S(0.302)VS(0.302)S(0.349)MS(0.046)EFES(0.001)LLDCSPYLAGGDAR 93.572 0.0022693 11878000.0 5774.5 6987.3 6862.3 5623.8 5302.8 5877.4 5950.8 7409.1 7261.8 6041.2 True False 5454.17697381964 6651.6196198488815 7304.654838068209 6158.284261142879 5720.100191195242 5840.716966489167 6552.364938211283 7383.39956139694 5943.24017508092 5987.679667982476 0.9108999272263011 1.1108843473067953 1.2199474993840949 1.0284926052528605 0.9553116580003362 0.975455817671885 1.0943078624009082 1.2330986243097983 0.9925781779644653 1.0 12.547781326069298 -6.962172071498117 24.785392620087748 1.1004438172569504 1.0411406016910376 0.029618474390332272 0.10245050251001152 462.9191219852437 303309.96474966354 0.04481412040329727 0.03021357345760928 1.0910079833304438e-07 6.962172071498117 -0.05930321556591278 SVSSDS(ph)LGPPRPAPAR ddPTM_KYSE-520_SHP099_60min_R1 2 SVSSDSLGPPRPAPAR 16 1 Q9P1Y5;Q9P1Y5-2 Q9P1Y5 CAMSAP3 Calmodulin-regulated spectrin-associated protein 3 1 SVS(0.188)S(0.188)DS(0.625)LGPPRPAPAR;SVS(0.027)S(0.284)DS(0.689)LGPPRPAPAR 174.59 3.9351e-08 1265500000.0 1154590.0 880480.0 827820.0 626420.0 755980.0 795750.0 737520.0 752140.0 991440.0 748200.0 True False 1090542.5910818966 838180.4191725767 881182.6017588306 685954.7684599593 815471.3250621906 790783.4290815253 812075.7191015626 749531.0018907957 811419.4881685287 741571.5300907914 1.4705831424628455 1.1302758873037606 1.1882637965496685 0.9250014875516824 1.0996529558818846 1.0663616347093434 1.0950740234082872 1.0107332488870355 1.0941891041437173 1.0 19.500226332497814 -3.2489786055154686 1.051374253265565 1.0511123968938105 4.056181554960474 0.7900014087797287 0.06402142650875825 5.307399244643958 0.9385220004366372 0.018866309804253415 29.35772484862132 0.0005636654227781925 3.2489786055154686 3.005069158066663 SVSSNVASVS(ph)PIPAGSK ddPTM_KYSE-520_SHP099_60min_R1 3 SVSSNVASVSPIPAGSK 17 0 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVSSNVAS(0.001)VS(0.999)PIPAGSK;SVSSNVAS(0.029)VS(0.971)PIPAGSK;SVSSNVASVS(1)PIPAGSK 362.96 6.431199999999999e-72 4314600000.0 3500900.0 4709500.0 2832830.0 2508950.0 2570210.0 3776910.0 2629210.0 3492310.0 4107100.0 3980570.0 True False 3306698.098128868 4483248.550896385 3015438.754488259 2747399.853656675 2772470.904505531 3753336.903716368 2894996.205416832 3480195.9917212827 3361354.171565565 3945305.246636598 0.8381349202188735 1.1363502367068778 0.7643106340273527 0.696371936239624 0.7027265905138982 0.9513425879825435 0.7337825654643169 0.8821107047897436 0.8519883662819612 1.0 21.911705494600298 -4.784487332360638 24.998568847677117 0.8112226414326879 0.9872427563069942 0.23203043791766187 0.11814546205217095 260.0559547363785 282065.08593352657 0.02991877557590732 0.0623445258554128 1.642527568741646e-05 4.784487332360638 0.17602011487430635 SVSSNVASVS(ph)PIPAGSKK ddPTM_KYSE-520_SHP099_60min_R1 2 SVSSNVASVSPIPAGSKK 18 1 Q9Y6G9;E9PHI6 Q9Y6G9 DYNC1LI1 Cytoplasmic dynein 1 light intermediate chain 1 1 SVSSNVASVS(1)PIPAGSKK;SVSSNVASVS(1)PIPAGSKK 190.19 1.1323e-12 1635130000.0 1939880.0 2181200.0 1691460.0 1190680.0 1267580.0 1838910.0 1444600.0 1629180.0 2099900.0 1679460.0 True False 1832270.9893450947 2076411.8779520544 1800494.2180316874 1303841.869209005 1367331.3344563767 1827432.6805809722 1590634.265937355 1623528.7548334699 1718611.0941712002 1664581.2910001096 1.1007398672877273 1.2474079152388584 1.0816499186710906 0.7832851878478305 0.821426590488026 1.0978332451898571 0.9555762007763972 0.9753376201038673 1.0324584947957864 1.0 20.666727896551524 -5.006931416070427 23.56784381384095 0.9504946328917061 1.171687755634207 0.48628511428457155 0.09322297064775767 125.76622657200964 427636.30685470626 0.02585973698577516 0.05063258913067155 9.841665133941615e-06 5.006931416070427 0.2211931227425008 SVSSSPWLPQDGFDPSDY(ph)AEPMDAVVKPR ddPTM_KYSE-520_SHP099_60min_R1 1 SVSSSPWLPQDGFDPSDYAEPMDAVVKPR 29 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 SVSSSPWLPQDGFDPS(0.313)DY(0.687)AEPMDAVVKPR 124.91 3.6439e-07 145890000.0 91313.0 92334.0 75368.0 77634.0 73985.0 86976.0 85632.0 89645.0 103010.0 85582.0 True False 86247.68586204732 87898.13604384042 80226.34187306365 85012.31201848671 79807.1985829335 86433.15052189102 94288.5182477832 89334.04241830032 84305.98067078213 84823.81006178845 1.016786274976586 1.0362436676661015 0.9457997915281587 1.0022222764641313 0.9408584514748786 1.0189727443147185 1.1115807952873178 1.0531717727985392 0.9938952354223523 1.0 16.372181665994713 -6.5214942599819175 24.999999264172043 1.0471191953125416 0.9884914131650007 0.25473196532592457 0.040750248168579965 67.8297834356511 1224865.6549567827 0.01559370845353803 0.012252045019080086 3.009578945854327e-07 6.5214942599819175 -0.05862778214754094 SVSSVLS(ph)SLTPAK ddPTM_KYSE-520_SHP099_60min_R1 2 SVSSVLSSLTPAK 13 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 SVS(0.001)S(0.001)VLS(0.359)S(0.359)LT(0.279)PAK;SVSS(0.04)VLS(0.459)S(0.459)LT(0.041)PAK 101.39 0.0020673 174882000.0 1102760.0 1351470.0 1150930.0 884680.0 1008440.0 1271750.0 943340.0 1195170.0 1472920.0 1335830.0 True False 1041587.70450244 1286543.3526021743 1225120.7893531101 968759.7212112589 1087798.4907612836 1263812.5365182888 1038702.0133111895 1191024.2342247753 1205474.8572916053 1323995.5854600135 0.7867002850621646 0.971712720745344 0.9253209019782721 0.7316940719818713 0.8216028079756287 0.9545443734083037 0.7845207527261501 0.899568130969985 0.9104825352365288 1.0 20.336466881162988 -8.062679224332367 1.612022436436467 0.9989543562619034 0.8588418627644682 0.2579635927650613 0.07457139886672134 0.6727235127677179 3.8682527454525446 0.07237628174888351 0.020990104113443184 8.65607031558582e-09 8.062679224332367 -0.14011249349743526 SVSSVLSSLT(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 3 SVSSVLSSLTPAK 13 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 SVSSVLSS(0.001)LT(0.999)PAK;SVSSVLSS(0.009)LT(0.991)PAK;SVSSVLSS(0.003)LT(0.996)PAK 267.47 1.4579000000000001e-21 3658750000.0 2472310.0 3225120.0 2319990.0 2113570.0 1992650.0 2767380.0 2154170.0 2671510.0 2898650.0 3032630.0 True False 2335166.0358722024 3070180.3941961885 2469540.267515245 2314443.0573320077 2149460.218372405 2750107.7549125142 2371934.5262732073 2662243.1553451214 2372328.229020118 3005763.2575504347 0.7768961943380931 1.0214312076920693 0.8216017217296787 0.7700017795873176 0.7151129460954689 0.9149448972750208 0.7891288578083924 0.8857128546826183 0.7892598404285045 1.0 21.519299952294947 -9.281333009807968 9.361250079130793 0.9999999985567689 0.834417799099911 0.26660685383926763 0.08368763293908932 0.0 0.0 0.0812618089074333 0.01970888361494739 5.231991023403426e-10 9.281333009807968 -0.16558219945685793 SVST(ph)PSEAGSQDSGDGAVGSR ddPTM_KYSE-520_SHP099_60min_R1 1 SVSTPSEAGSQDSGDGAVGSR 21 0 E9PGG1;E7EQL5;Q13409-2;E7EV09;Q13409-3;Q13409-6;E7EQU2;E7ETL8;E7EMU4;E7EUM4;E7ESD3;E7ET01;E7ERH4;E7ERR6;Q13409-7;Q13409-5;Q13409 E9PGG1 DYNC1I2 Cytoplasmic dynein 1 intermediate chain 2 1 S(0.056)VS(0.037)T(0.895)PS(0.012)EAGSQDSGDGAVGSR 191.89 1.5362000000000001e-09 0.0 124600.0 119420.0 111880.0 98321.0 104160.0 127830.0 104100.0 124320.0 138950.0 117490.0 True False 117688.18961605793 113682.88394692568 119091.96381432921 107665.39827871346 112356.7994106692 127032.16555386895 114623.44391809394 123888.76293650598 113720.18264445367 116449.13000583695 1.0106403509425865 0.9762450259716615 1.0226951786446132 0.9245702245548488 0.9648573536361962 1.0908811903317914 0.984322028961045 1.063887406718248 0.9765653263253534 1.0 16.829340335617594 SVSTTNIAGHFNDES(ph)PLGLR ddPTM_KYSE-520_SHP099_60min_R1 1 SVSTTNIAGHFNDESPLGLR 20 0 Q92974-3;V9GYM8;Q92974-2;Q92974;A0A5F9ZI21;V9GYG5;V9GYF5;V9GZ14 Q92974-3 ARHGEF2 Rho guanine nucleotide exchange factor 2 1 SVSTTNIAGHFNDES(1)PLGLR 113.6 5.895e-05 562870000.0 141470.0 172900.0 140690.0 208920.0 130270.0 177410.0 153010.0 156310.0 181760.0 182640.0 True False 133622.37708654685 164593.62447180884 149759.10251195912 228775.6939859114 140521.50786509097 176302.71838310198 168477.74403369433 155767.7970930281 148756.96579673182 181021.9516917698 0.7381556537080581 0.9092467677735911 0.8272980216618002 1.2638008365717601 0.7762677761002166 0.9739300495626997 0.9307033896119141 0.860491203620749 0.8217620261327405 1.0 17.465805131284327 SVT(ph)PASTLTK ddPTM_KYSE-520_SHP099_60min_R1 7 SVTPASTLTK 10 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 S(0.001)VT(0.988)PAS(0.004)T(0.007)LTK;SVT(0.997)PAS(0.002)T(0.001)LTK;SVT(1)PASTLTK;SVT(1)PASTLTK;SVT(0.998)PAS(0.002)T(0.001)LTK;SVT(1)PASTLTK;S(0.005)VT(0.994)PAST(0.001)LTK 224.09 9.8827e-09 8438020000.0 14207790.0 16594280.0 12078890.0 9101820.0 9834900.0 13136690.0 9038450.0 11635000.0 14000550.0 12190090.0 True False 13419655.566172803 15797065.880277906 12857514.576307308 9966854.236238021 10608850.677073633 13054699.044902278 9952144.732771344 11594640.900629427 11458403.045144327 12082095.286346495 1.1107059866791344 1.307477346096546 1.0641792066345548 0.8249276305163041 0.8780638147310659 1.080499593448405 0.8237101675582608 0.9596548136590247 0.9483788013237259 1.0 23.52636733386566 -4.9957510752976235 5.785941340565274 0.9292401951285733 1.2064409204553177 0.6301178704725657 0.08564021985401994 0.08911866652183129 11.273142746328954 0.02209235474497344 0.04408016281664592 1.0098315256789043e-05 4.9957510752976235 0.27720072532674445 SVT(ph)PTKEFLK ddPTM_KYSE-520_SHP099_60min_R1 1 SVTPTKEFLK 10 1 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 S(0.167)VT(0.819)PT(0.014)KEFLK 71.548 0.028743 0.0 274580.0 294860.0 200740.0 190600.0 210570.0 274760.0 215790.0 267890.0 289230.0 275540.0 True False 259348.50003834057 280694.48300611664 213680.0215953563 208714.56669402067 227140.66102058964 273045.12092295295 237604.15910744993 266960.7521159963 236713.12289496494 273098.92996687593 0.9496503705444648 1.0278124599029441 0.7824271652081297 0.7642452744847282 0.8317156755178039 0.9998029686753825 0.8700296230976403 0.9775239769279795 0.8667669365225114 1.0 18.059064135905423 -6.2474698549343 24.720665777020166 0.9368702613990287 0.8690020983354733 0.15186414718990204 0.08400305331979332 1598.2773478442994 2828334.4189495333 0.030081271964274753 0.029934739795165196 5.656270167909078e-07 6.2474698549343 -0.06786816306355548 SVT(ph)PTKEFLKDEIK ddPTM_KYSE-520_SHP099_60min_R1 3 SVTPTKEFLKDEIK 14 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 S(0.02)VT(0.837)PT(0.143)KEFLKDEIK;SVT(0.868)PT(0.132)KEFLKDEIK;S(0.008)VT(0.973)PT(0.019)KEFLKDEIK 172.37 1.5931e-08 4460560000.0 6204760.0 5926270.0 4932150.0 4902460.0 4830610.0 5612910.0 5086280.0 5263000.0 6259860.0 5273560.0 True False 5860569.5939176 5641563.093687377 5250084.280719015 5368388.32442166 5210751.524588836 5577877.746686751 5600450.819709163 5244743.881393429 5123227.222228931 5226840.36116759 1.121245186185186 1.0793448247627644 1.0044470307002513 1.0270809807595598 0.9969218810089773 1.067160533183138 1.071479217409677 1.0034253045795796 0.9801767163756435 1.0 22.317507666316853 -4.568208291477437 3.641631361712258 1.0221908220156513 1.1153648044345588 0.5793787610342471 0.028597633648002597 0.1668816218133064 4.457977975747717 0.007976178155898074 0.02798987222816147 2.7026618326836583e-05 4.568208291477437 0.09317398241890751 SVTLLEVCGS(ph)WPEGFGLR ddPTM_KYSE-520_SHP099_60min_R1 2 SVTLLEVCGSWPEGFGLR 18 0 Q9H6U6-7;Q9H6U6-3;Q9H6U6-8;K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6;K7EIE2 Q9H6U6-7 BCAS3 Breast carcinoma-amplified sequence 3 1 SVTLLEVCGS(1)WPEGFGLR;SVTLLEVCGS(1)WPEGFGLR 272.71 3.735e-30 154153000.0 142831.0 154126.0 162426.0 140937.0 156031.0 136491.0 125201.0 142837.0 204241.0 135719.0 True False 134907.8797034605 146721.5556121576 172896.23985078867 154331.61010574596 168309.75200505127 135639.1090402342 137857.53892400855 142341.5317854063 167155.98289662355 134516.6352477842 1.0029085209792499 1.0907316804489757 1.2853149317354537 1.1473050141453651 1.251218867428694 1.0083444979900247 1.0248363607227484 1.0581704747759142 1.242641719284136 1.0 17.037425071794505 -6.274727494097315 24.960911224090683 1.0678116283951364 1.1586549308527254 0.17224993178663695 0.09708260547909778 1480.7993731149027 2781583.9018504475 0.03529407289407223 0.03129292501141909 5.312176617777293e-07 6.274727494097315 0.09084330245758898 SVTPT(ph)KEFLKDEIK ddPTM_KYSE-520_SHP099_60min_R1 2 SVTPTKEFLKDEIK 14 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 S(0.007)VT(0.423)PT(0.57)KEFLKDEIK;S(0.074)VT(0.291)PT(0.635)KEFLKDEIK 149.36 2.3722e-06 4764410000.0 2766950.0 2471190.0 2213150.0 1850860.0 1967830.0 2120800.0 2138990.0 2240650.0 2650260.0 2204160.0 True False 2613461.7677219263 2352470.323068186 2355813.1901652017 2026765.177918648 2122687.025578891 2107563.300529183 2355219.98373068 2232877.708121644 2169039.5916177738 2184632.8572105323 1.1962933538676828 1.0768263945603924 1.0783565679650366 0.9277372036354617 0.9716447404756434 0.96472196395519 1.0780850319801394 1.0220837340022038 0.9928622946682817 1.0 21.05895941445647 -4.429310203856569 1.4326539066429793 0.9983682033538172 1.2328120514937986 0.6779332229053989 0.042070552824495594 0.5512523290203347 1.3179043637708443 0.013169052638502685 0.16985565780883424 3.721258127128917e-05 4.429310203856569 0.23444384813998143 SVTVDS(ph)MDEEKIEEYLKR ddPTM_KYSE-520_SHP099_60min_R1 1 SVTVDSMDEEKIEEYLKR 18 2 P29084 P29084 GTF2E2 Transcription initiation factor IIE subunit beta 1 SVTVDS(1)MDEEKIEEYLKR 194.25 8.3156e-13 101320000.0 210570.0 198090.0 163520.0 179970.0 153850.0 154840.0 142370.0 200960.0 229350.0 149420.0 True False 198889.2623391119 188573.45906084814 174060.76084125054 197074.29469004658 165957.11971324365 153873.58612501828 156762.14899730132 200262.91666441664 187705.82144300445 148096.25504700077 1.3429729352439814 1.273316864096268 1.175321825565471 1.3307176108369643 1.1206030811553906 1.0390106493657383 1.0585152808053808 1.3522483509178536 1.2674582580324731 1.0 17.17617563367646 -4.452243504489709 0.778264314760508 1.159519404470886 1.4117025827235643 0.23108078124985076 0.11206366349381217 3.70135064699114 2.0800080402689654 0.04845446349878659 0.7743810721021519 3.529851990935318e-05 4.452243504489709 0.2521831782526782 SVVCS(ph)DVEQQVIVIEEEKK ddPTM_KYSE-520_SHP099_60min_R1 1 SVVCSDVEQQVIVIEEEKK 19 1 A0A0C4DG89;Q7L014 A0A0C4DG89 DDX46 Probable ATP-dependent RNA helicase DDX46 1 SVVCS(1)DVEQQVIVIEEEKK 116.24 2.4989e-05 37582000.0 59775.0 67989.0 62547.0 54162.0 58515.0 70462.0 57489.0 61824.0 66930.0 55142.0 True False 56459.16159149174 64722.70638643038 66578.87969873837 59309.54019560094 63119.79759519305 70022.22052144822 63300.549158571695 61609.5469738301 54777.19916799772 54653.48477982683 1.0330386400599914 1.1842375037413937 1.218200083067957 1.0851922880037963 1.1549089294026358 1.2812032170233023 1.158216157918929 1.127275730395344 1.002263613906218 1.0 15.738025866559019 -7.698222470341713 3.2049606265876798 0.9946972222916666 1.1633221778987357 0.4878801141745198 0.0637371295193227 0.20811946664710423 4.0111694340621815 0.05664186303826636 0.017004536413901032 2.0034454857023673e-08 7.698222470341713 0.16862495560706914 SVVCSDVEQQVIVIEEEKK ddPTM_KYSE-520_SHP099_60min_R1 1 SVVCSDVEQQVIVIEEEKK 19 1 A0A0C4DG89;Q7L014 A0A0C4DG89 DDX46 Probable ATP-dependent RNA helicase DDX46 0 124.29 0.00048143 0.0 382640.0 376230.0 293170.0 342880.0 347840.0 375560.0 302770.0 330570.0 363850.0 299640.0 False True 361414.19642607047 358155.3460672569 312068.2072885848 375467.2121093694 375213.02906112885 373215.99073309125 333376.9463504452 329423.32982561825 297784.01191208663 296985.4227163923 1.216942545935006 1.2059694472252904 1.0507862791184732 1.2642614195509645 1.263405542363742 1.2566811775455244 1.1225363969086293 1.1092239033570435 1.0026889844908546 1.0 18.180032593708994 -7.421868037942815 1.578890548378959 0.9982627019512039 1.2049223729126235 0.6287178258282571 0.061347825231975704 0.2854202341162547 1.257216131231152 0.05643255410207949 0.01954554216420386 3.785575934314471e-08 7.421868037942815 0.20665967096141957 SVVS(ph)DLEADDVK ddPTM_KYSE-520_SHP099_60min_R1 14 SVVSDLEADDVK 12 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK;SVVS(1)DLEADDVK 280.91 3.6611e-23 38551500000.0 25671340.0 26529000.0 22473000.0 22505520.0 23273870.0 26105210.0 25906450.0 27236000.0 29794650.0 28034440.0 True False 24247299.595652472 25254507.019159146 23921645.538071334 24644437.854268704 25105391.158794094 25942277.701154046 28525326.788587 27141524.67293019 24384692.622004833 27786076.672064308 0.8726420747276759 0.9088907123239042 0.860922030137554 0.8869347819458744 0.9035241446675581 0.9336430618589637 1.0266050556632171 0.9768030583539654 0.8775867464052896 1.0 24.727858808021736 -6.323366970205337 2.757619501298676 0.9689548831592717 0.8846691520580872 0.516335144280901 0.038073687872195394 0.23576482959325235 3.5339166099631374 0.01470533546793923 0.013091070096269383 4.749337467693142e-07 6.323366970205337 -0.08428573110118454 SVVS(ph)DLEADDVKGSVPLS(ph)SSPPATHFPDETEITNPVPK ddPTM_KYSE-520_SHP099_60min_R1 6 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK 38 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 2 S(0.039)VVS(0.961)DLEADDVKGS(0.001)VPLS(0.379)S(0.329)S(0.286)PPAT(0.005)HFPDETEITNPVPK;S(0.029)VVS(0.971)DLEADDVKGS(0.001)VPLS(0.376)S(0.331)S(0.291)PPATHFPDETEITNPVPK;S(0.019)VVS(0.981)DLEADDVKGSVPLS(0.403)S(0.329)S(0.268)PPATHFPDETEITNPVPK;S(0.112)VVS(0.883)DLEADDVKGS(0.005)VPLS(0.368)S(0.331)S(0.299)PPAT(0.001)HFPDETEITNPVPK;S(0.105)VVS(0.895)DLEADDVKGSVPLS(0.398)S(0.329)S(0.272)PPAT(0.001)HFPDETEITNPVPK;S(0.007)VVS(0.993)DLEADDVKGSVPLS(0.411)S(0.328)S(0.261)PPATHFPDETEITNPVPK 269.61 1.2587e-41 4752450000.0 994481.0 1345819.0 1226422.0 1057107.0 1013390.0 961322.0 837362.0 820817.0 1481901.0 969030.0 True False 939315.1564812758 1281163.835124496 1305479.12446458 1157574.1314491918 1093138.027599637 955322.032813709 922010.7228255812 817969.7774071273 1212825.1340841928 960445.1480939317 0.9779997934764002 1.3339271250076614 1.3592438121587596 1.2052475185558238 1.1381576863280982 0.9946658949858929 0.9599826962064141 0.8516569416071741 1.2627739715184425 1.0 19.87334369703917 -6.026605345725113 2.479707483759263 1.0008234374290503 1.2379245273758397 0.33278794648288434 0.1360743229084088 0.31025006153679086 3.814396809412605 0.0478993194570509 0.051351771838659695 9.405776487977281e-07 6.026605345725113 0.23710108994678936 SVVS(ph)DLEADDVKGSVPLSS(ph)SPPATHFPDETEITNPVPK ddPTM_KYSE-520_SHP099_60min_R1 2 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK 38 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 2 S(0.47)VVS(0.53)DLEADDVKGSVPLS(0.092)S(0.481)S(0.426)PPAT(0.001)HFPDETEITNPVPK;S(0.024)VVS(0.976)DLEADDVKGSVPLS(0.112)S(0.481)S(0.407)PPATHFPDETEITNPVPK 228.52 5.3734e-23 1483247000.0 342357.0 447628.0 369816.0 353003.0 303995.0 300049.0 274161.0 274867.0 463650.0 293121.0 True False 323365.77473824046 426123.27897667343 393654.93108652154 386552.2989857783 327917.67700505356 298176.28289347485 301875.8694335121 273913.55053143983 379462.8476653537 290524.1759846876 1.1130425674291693 1.466739480569537 1.3549816628935885 1.3305340172659228 1.128710462369014 1.0263389677738577 1.0390731456697182 0.9428253246155899 1.3061317406003201 1.0 18.148298697006258 -5.848817677098317 3.5180604475544763 1.0591571324018503 1.3317254580170759 0.4943506770784567 0.12105383043050622 0.18538246719677537 4.506880908682334 0.03756747888108061 0.04412168359133712 1.4163882747805783e-06 5.848817677098317 0.2725683256152256 SVVS(ph)FDK ddPTM_KYSE-520_SHP099_60min_R1 12 SVVSFDK 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 SVVS(1)FDK;SVVS(1)FDK;SVVS(1)FDK;SVVS(1)FDK;SVVS(1)FDK;SVVS(1)FDK;SVVS(1)FDK;SVVS(1)FDK;SVVS(1)FDK;SVVS(1)FDK;SVVS(1)FDK;SVVS(1)FDK 159.79 0.0010278 114480700000.0 45327800.0 36337500.0 35665500.0 39800900.0 38801700.0 36758200.0 41485900.0 45601300.0 43914700.0 36603500.0 True False 42813376.57527091 34591791.95630051 37964555.19681769 43583565.56942311 41855173.03852686 36528778.43903803 45679699.635366574 45443119.73372344 35940897.479499064 36279221.46709204 1.180107368458991 0.9534877143843302 1.0464545175329734 1.2013368481172249 1.1536954583353622 1.0068787852069085 1.2591146609031143 1.252593575497306 0.9906744419005833 1.0 25.112640160937485 -5.227688853431589 23.33767807610685 1.1360484936349882 1.0493635734385136 0.05700370029455193 0.10766811512351257 634.4143137666277 438679.3141116233 0.02866862856567188 0.04964955351055647 5.9198560530763266e-06 5.227688853431589 -0.08668492019647456 SVVS(ph)FDKVK ddPTM_KYSE-520_SHP099_60min_R1 9 SVVSFDKVK 9 1 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 SVVS(1)FDKVK;S(0.181)VVS(0.819)FDKVK;SVVS(1)FDKVK;SVVS(1)FDKVK;SVVS(1)FDKVK;SVVS(1)FDKVK;SVVS(1)FDKVK;SVVS(1)FDKVK;SVVS(1)FDKVK 158.4 0.00010283 64535630000.0 104951800.0 93878600.0 87836740.0 87819340.0 88692870.0 85823480.0 87612730.0 91846570.0 120266950.0 85846060.0 True False 99129914.4377736 89368531.14134865 93498836.80415317 96165663.66975261 95672494.27560063 85287823.82671642 96469479.76624508 91527975.68582061 98429503.56309009 85085530.69562404 1.1650619515131244 1.050337588667645 1.0988805739324352 1.1302234690615667 1.1244273085379142 1.0023775268184676 1.133794183071441 1.0757172804532782 1.1568301068157094 1.0 26.34241047804393 SVVS(ph)FDKVKEPR ddPTM_KYSE-520_SHP099_60min_R1 2 SVVSFDKVKEPR 12 2 Q15424-2;Q15424;Q15424-4;Q15424-3 Q15424-2 SAFB Scaffold attachment factor B1 1 S(0.001)VVS(0.999)FDKVKEPR;S(0.082)VVS(0.918)FDKVKEPR 119.96 9.675299999999999e-05 6685300000.0 9864100.0 11340300.0 12875100.0 6532400.0 7885800.0 7143100.0 5104400.0 5857900.0 15221100.0 6355500.0 True False 9316918.709404161 10795494.965862663 13705049.546888376 7153237.33196233 8506367.595935624 7098517.263301599 5620402.566143318 5837580.312144145 12457331.932705982 6299195.214504185 1.4790649268896334 1.7137895553713818 2.1756826197943306 1.135579560305049 1.350389582521482 1.1268927254321215 0.8922413696914939 0.9267184320153866 1.9776069019138198 1.0 22.5867360909194 -5.284519665525345 24.608880177709437 1.1885219388948542 1.7819401069518845 0.3975851512653732 0.3314712977928825 622.1536313296417 663357.0507024443 0.09341997008200993 0.13867158899721235 5.1937415491010305e-06 5.284519665525345 0.5934181680570303 SVVSDLEADDVKGSVPLSS(ph)SPPATHFPDETEITNPVPK ddPTM_KYSE-520_SHP099_60min_R1 1 SVVSDLEADDVKGSVPLSSSPPATHFPDETEITNPVPK 38 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 S(0.001)VVS(0.001)DLEADDVKGS(0.002)VPLS(0.057)S(0.294)S(0.294)PPAT(0.294)HFPDET(0.057)EITNPVPK 87.803 0.00070839 197300000.0 106970.0 192290.0 152680.0 111760.0 99571.0 116780.0 84154.0 110960.0 180310.0 127900.0 True False 101036.16086059176 183052.0997668257 162521.99709663738 122381.63679813076 107406.67121850754 116051.1327026584 92661.10758389319 110575.10565825878 147570.2492452065 126766.90550469435 0.7970231698749659 1.444005429004079 1.2820538329747189 0.9654068332022098 0.847276903943436 0.915468688303359 0.7309566105994582 0.8722710806738437 1.1641070566303424 1.0 16.951818630828626 -5.3811290925510225 4.986817028797621 0.9058474577773157 1.199577503481759 0.26868443767274086 0.18443876123153236 0.25742162160841553 9.420255868653593 0.052008217873708525 0.0781827906099139 4.157870008581505e-06 5.3811290925510225 0.2937300457044434 SVWGSLAVQNS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 SVWGSLAVQNSPK 13 0 P18615;P18615-3;P18615-4 P18615 NELFE Negative elongation factor E 1 SVWGSLAVQNS(1)PK;SVWGSLAVQNS(1)PK;SVWGSLAVQNS(1)PK;SVWGSLAVQNS(1)PK 233.4 6.2694e-18 3778480000.0 3373440.0 3426990.0 3052190.0 2622030.0 2861680.0 2993760.0 2425490.0 2741500.0 3472360.0 2877570.0 True False 3186308.5584140844 3262352.2563831387 3248939.05107667 2871226.9428579323 3086877.935268087 2975074.8333611162 2670682.1997012286 2731990.376370909 2841866.955072291 2852076.9685155842 1.11718883942759 1.1438514080779139 1.139148447584723 1.0067143960537346 1.0823263079308512 1.0431257172240862 0.9363990625720154 0.9578950380826586 0.9964201479988084 1.0 21.443581485396784 -5.776871711095252 0.7664825909849143 0.9705376877733664 1.144036876879319 0.722488410713205 0.0373998391213808 0.3807101988904002 0.4855421975771793 0.022485041990118724 0.03836351233141079 1.671584320909708e-06 5.776871711095252 0.17349918910595263 SVYATMGDHENRS(ph)PVKEPVEQPR ddPTM_KYSE-520_SHP099_60min_R1 7 SVYATMGDHENRSPVKEPVEQPR 23 2 Q96T58 Q96T58 SPEN Msx2-interacting protein 1 SVYATMGDHENRS(1)PVKEPVEQPR;SVYATMGDHENRS(1)PVKEPVEQPR;SVYATMGDHENRS(1)PVKEPVEQPR;SVYATMGDHENRS(1)PVKEPVEQPR;SVYAT(0.004)MGDHENRS(0.996)PVKEPVEQPR;SVYATMGDHENRS(1)PVKEPVEQPR;S(0.001)VYAT(0.032)MGDHENRS(0.967)PVKEPVEQPR 315.15 6.589399999999999e-61 16870110000.0 4645930.0 5287740.0 4586700.0 6441170.0 4685010.0 4324450.0 4286410.0 4345190.0 5581270.0 4019220.0 True False 4388211.00146816 5033709.033340448 4882366.020979482 7053336.860191629 5053693.632939509 4297459.503476717 4719722.154130231 4330117.550064975 4567852.0603671055 3983612.8377058473 1.1015656340728432 1.2636039792058076 1.225612583323038 1.7705879430425846 1.2686206814841772 1.0787844297518663 1.184784351897085 1.0869825272876366 1.146660643607555 1.0 21.925646009836683 -6.126035157699348 5.1867292185134986 1.1118534098854425 1.3475998773777185 0.31397715969071094 0.16844451663494076 0.30670949574662804 11.691002903812286 0.05880465793532995 0.05906996763533445 7.481089359523435e-07 6.126035157699348 0.235746467492276 SVYFKPSLT(ph)PSGEFR ddPTM_KYSE-520_SHP099_60min_R1 2 SVYFKPSLTPSGEFR 15 1 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 SVYFKPS(0.023)LT(0.968)PS(0.009)GEFR;SVYFKPS(0.206)LT(0.779)PS(0.016)GEFR 125.09 0.00023680000000000004 883120000.0 670800.0 666180.0 612530.0 549360.0 506430.0 555080.0 566440.0 689480.0 795140.0 722560.0 True False 633589.3867933528 634175.7128434334 652014.6638826526 601571.009228893 546283.159807461 551615.539823529 623701.2831216645 687088.3548058418 650762.6198482261 716158.6805431743 0.8847053090424088 0.8855240187306527 0.9104332344168875 0.8399968129585866 0.7627962554236299 0.7702420634001856 0.8708981683341673 0.9594079824386351 0.908684957019095 1.0 19.449919757832628 -7.162127951819332 4.2779780057057115 0.9505425099501147 0.842184597527714 0.5136434386889448 0.049297606435415864 0.22224815415014348 6.979651154652598 0.02804946013618709 0.015466465013822565 6.884494355228002e-08 7.162127951819332 -0.10835791242240067 SWEDS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 2 SWEDSPER 8 0 Q9UDY2-7;A0A3B3ITE1;Q9UDY2;Q9UDY2-3;A0A2R8YDH4;A0A1B0GTW1;A0A3B3IRI3;Q9UDY2-6;Q9UDY2-2;Q9UDY2-4;A0A3B3IU51;A0A3B3ISZ5;A0A3B3ISF1;Q9UDY2-5;A0A3B3IRV6;B1AN86;A0A3B3IU26 Q9UDY2-7 TJP2 Tight junction protein ZO-2 1 S(0.003)WEDS(0.997)PER;S(0.003)WEDS(0.997)PER 120.27 0.0014089999999999999 2255900000.0 7424400.0 6930000.0 6504600.0 6646200.0 7151700.0 7103000.0 6217900.0 7372100.0 8118600.0 7063200.0 True False 7012553.731825525 6597072.397857938 6923896.923727979 7277852.84974711 7714498.1023932705 7058667.542275922 6846466.012856072 7346527.905761078 6644466.893251261 7000625.543086451 1.0017038746988622 0.9423547020555832 0.9890397481073322 1.039600362132558 1.101972681571551 1.0082909732612098 0.9779791778203848 1.0494102077801073 0.9491247392617767 1.0 22.73905240960854 -5.049199816734162 5.885233781533608 1.0212338472205886 0.970400279527128 0.17097798337710135 0.04136766620419494 0.31266592374260566 26.040612366973722 0.011497554167833983 0.020798401758144933 8.928945728531862e-06 5.049199816734162 -0.05083356769346059 SWHEES(ph)PFEK ddPTM_KYSE-520_SHP099_60min_R1 1 SWHEESPFEK 10 0 Q9BY84 Q9BY84 DUSP16 Dual specificity protein phosphatase 16 1 S(0.03)WHEES(0.97)PFEK 205.56 4.0683999999999996e-07 374300000.0 319280.0 329050.0 284730.0 332960.0 278140.0 295660.0 235200.0 298840.0 355920.0 251130.0 True False 301568.9019310997 313241.94408588036 303084.15138410777 364604.4182919256 300028.0355998799 293814.67627049173 258976.31133079462 297803.39378978004 291293.9000130546 248905.1835761833 1.2115814447825568 1.2584789902135778 1.217669102063283 1.464832564165261 1.2053908692827575 1.1804281134248167 1.0404617035688564 1.1964531614450298 1.1703006575750852 1.0 17.925236749921623 -6.2326624474411085 2.8732811891273826 1.1204563463375603 1.283660333495436 0.4529678245411165 0.08765798966782055 0.26909897305252306 4.453713008093942 0.032144206366258844 0.0304490716550462 5.852447851143125e-07 6.2326624474411085 0.16320398715787565 SWLKPR ddPTM_KYSE-520_SHP099_60min_R1 1 SWLKPR 6 1 P53396;P53396-2;P53396-3;K7ESG8 P53396 ACLY ATP-citrate synthase 0 106.76 0.010931 309290000.0 594050.0 462730.0 327660.0 351030.0 475350.0 465260.0 379790.0 438500.0 394800.0 336700.0 False True 561096.8622906841 440499.75622811 348781.4878745364 384391.78565898235 512757.34062847146 462356.1397605659 418182.879593208 436978.9458466696 323114.2720980952 333717.0999486358 1.6813548433000454 1.3199795764014182 1.0451411927294685 1.1518492331323333 1.5365030461651283 1.385473324057202 1.2531059381061769 1.309429291798135 0.9682280954372056 1.0 18.348266087774633 -10.261287595559484 0.04953938119021656 8.062476909600163e-10 2.0906071877108836 0.3207346011040856 0.18172215867980684 343.47720181781034 2.9892182102834144 85.16756022748469 44.91020311600736 5.479140088414927e-11 10.261287595559484 2.090607186904636 SWLWQHDEPCYWR ddPTM_KYSE-520_SHP099_60min_R1 1 SWLWQHDEPCYWR 13 0 C9JJ19;P82930 C9JJ19 MRPS34 28S ribosomal protein S34, mitochondrial 0 70.96300000000001 0.037473 416280000.0 129410.0 171710.0 97540.0 112280.0 149330.0 121850.0 130910.0 109130.0 103110.0 92302.0 False True 122231.36932756058 163460.7938580352 103827.58446951811 122951.05744178692 161081.42142852567 121089.48895203757 144143.66035847922 108751.45350113344 84387.82319157697 91484.27608986931 1.3360915618711018 1.7867638117118616 1.1349227310660839 1.3439583576199075 1.7607552719801578 1.3236098499930815 1.5756113128870377 1.188744756468333 0.9224298075953385 1.0 16.481236180251713 -7.500597684632271 3.545578374702989 0.9699975925077176 1.4658096989372187 0.5308822459151954 0.192177775794239 0.1817517625444524 4.764080951031063 0.13262195063100368 0.05026600127151836 3.157928664551047e-08 7.500597684632271 0.49581210642950113 SWPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 SWPSPK 6 0 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 SWPS(1)PK;SWPS(1)PK;S(0.001)WPS(0.999)PK;S(0.001)WPS(0.999)PK;SWPS(1)PK;S(0.001)WPS(0.999)PK;SWPS(1)PK;S(0.007)WPS(0.993)PK;S(0.001)WPS(0.999)PK;SWPS(1)PK 92.439 0.014666 31507000000.0 86904670.0 81234400.0 74015670.0 68689980.0 77968910.0 71070390.0 68861120.0 72567770.0 86033020.0 72207600.0 True False 82083894.71493542 77331777.48867966 78786838.5174592 75218255.04680447 84104619.63458632 70626813.33378746 75822274.02936745 72316049.3433149 70411592.28394346 71567896.84066264 1.1469373607231381 1.0805372367005504 1.1008684339693349 1.0510055257634427 1.1751724355102287 0.9868504797762829 1.0594453292120163 1.0104537444256316 0.9838432508462062 1.0 26.09280924813992 -6.279562566525876 24.999723565842128 1.011979839047376 1.1053319024149302 0.6513174782430671 0.03743894121768234 565.471273475582 780027.4553081137 0.01280491969305131 0.011313433212353357 5.253363272116892e-07 6.279562566525876 0.0933520633675542 SWQQTTFQNRPDS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 SWQQTTFQNRPDSR 14 1 Q9BYW2;H7C3H4;C9JG86;Q9BYW2-3;Q9BYW2-2;H7BZ93;H7BXT4 Q9BYW2 SETD2 Histone-lysine N-methyltransferase SETD2 1 SWQQTTFQNRPDS(1)R;SWQQTTFQNRPDS(1)R;SWQQTT(0.001)FQNRPDS(0.999)R 178.47 1.3869e-08 1366550000.0 1459010.0 1453710.0 1274220.0 1175360.0 1195530.0 1326100.0 1296820.0 1473630.0 1543950.0 1357890.0 True False 1378075.8068356717 1383871.5895368028 1356358.260024085 1287065.8610151315 1289611.4093647988 1317823.3180081798 1427915.2213435418 1468518.3214778265 1263607.5998121928 1345860.1510224354 1.0239368524201882 1.02824323053587 1.0078002970766868 0.9563147107352584 0.9582061021608337 0.9791680933617387 1.060968496807614 1.0911373818165349 0.9388847710902531 1.0 20.360097075922848 -6.743628232698293 24.990716631426256 1.030342454731609 0.9914350970760488 0.09455378121134661 0.04368782838213223 482.66656601770404 677226.9805551956 0.017308813105856486 0.013378617649436146 1.8045618314447324e-07 6.743628232698293 -0.03890735765556008 SWS(ph)ASDPFYTNDR ddPTM_KYSE-520_SHP099_60min_R1 1 SWSASDPFYTNDR 13 0 Q9Y2G3 Q9Y2G3 ATP11B Probable phospholipid-transporting ATPase IF 1 S(0.071)WS(0.925)AS(0.004)DPFYTNDR 74.85300000000001 0.033776 0.0 211990.0 241500.0 195180.0 250930.0 227370.0 184770.0 214830.0 236380.0 274390.0 175120.0 True False 200230.4921084122 229897.97750110982 207761.61509904178 274778.31175514485 245262.7254416653 183616.7818930485 236547.11293875283 235560.05295150657 224567.69280900792 173568.5730412983 1.1536102913098794 1.3245368874837076 1.197000191098003 1.5831109684226363 1.4130595253744946 1.0578918676099236 1.3628452939027713 1.3571584349861436 1.2938269231237791 1.0 17.40514622624057 -8.062355072565158 19.95672258236279 0.9999999990003976 1.310533446662444 0.3041164555114305 0.1382964433975442 2599.2615908956686 831894.7239361235 0.13593043010172906 0.03509708611688053 8.662533505895207e-09 8.062355072565158 0.3105334476620465 SWS(ph)LATFR ddPTM_KYSE-520_SHP099_60min_R1 9 SWSLATFR 8 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 S(0.004)WS(0.995)LATFR;S(0.011)WS(0.989)LATFR;S(0.009)WS(0.99)LATFR;S(0.008)WS(0.992)LATFR;S(0.003)WS(0.996)LATFR;S(0.002)WS(0.998)LATFR;S(0.007)WS(0.993)LATFR;SWS(1)LATFR;SWS(1)LATFR 163.16 0.00019763 2638607000.0 3039094.0 2641303.0 2373132.0 2167572.0 2038077.0 2568635.0 1963734.0 1939470.0 2250426.0 2756656.0 True False 2870509.397536307 2514410.839203369 2526107.885865452 2373577.3911757153 2198462.0648281355 2552603.1961782235 2162247.3969169524 1932742.431245699 1841805.3670228666 2732234.1724859164 1.050608848407961 0.9202764772229016 0.9245576061172966 0.868731317058421 0.8046389606597557 0.9342549119264342 0.7913843618131886 0.7073853517786868 0.6741023099594369 1.0 21.381649707786025 -4.091638243732944 0.5011862467916899 0.790362548275349 1.240795002204063 0.3709434013742229 0.09193756890157331 5.416600058112539 0.925524494049787 0.057507140549615164 1.4935233046321048 8.097701362737066e-05 4.091638243732944 0.450432453928714 SWS(ph)PPPEVSR ddPTM_KYSE-520_SHP099_60min_R1 5 SWSPPPEVSR 10 0 Q9NR19;Q9NR19-2;F8WCJ4;C9JXD9;C9IYL0;B4DEH9;C9JY31 Q9NR19 ACSS2 Acetyl-coenzyme A synthetase, cytoplasmic 1 S(0.156)WS(0.844)PPPEVSR;SWS(1)PPPEVSR;SWS(1)PPPEVSR;SWS(1)PPPEVSR;SWS(1)PPPEVSR 136.81 0.00027366 13494290000.0 3581070.0 3162230.0 2814660.0 2606430.0 2955990.0 2962800.0 2604980.0 3135260.0 3680170.0 2763480.0 True False 3382420.9084139424 3010311.724195999 2996097.4872152284 2854144.323548243 3188609.595717588 2944308.06620514 2868316.8005548227 3124384.5148351863 3011943.897536084 2738997.717154909 1.2349119122039207 1.0990559449326278 1.0938663688728363 1.042039686879674 1.1641519727258869 1.0749582037853957 1.0472140164958743 1.1407035848429228 1.0996518466122323 1.0 21.38521663293933 -1.1031335625833931 0.01249362645990402 1.682117390686831e-07 2.379919466613385 0.34862384217574194 0.05154180824052074 10568.262890297912 10.390488911479 824.0608836553195 1185.5346129357388 0.07886175494999344 1.1031335625833931 2.3799192984016457 SWS(ph)STPTAGGIEGSVK ddPTM_KYSE-520_SHP099_60min_R1 2 SWSSTPTAGGIEGSVK 16 0 B5MCH3;Q8N3C7 B5MCH3 CLIP4 CAP-Gly domain-containing linker protein 4 1 S(0.036)WS(0.926)S(0.036)T(0.002)PTAGGIEGSVK;SWS(0.859)S(0.14)T(0.001)PTAGGIEGSVK 295.67 1.4294999999999998e-37 1221560000.0 1010200.0 1169650.0 918260.0 904070.0 1074850.0 1154610.0 1090410.0 1461990.0 1723320.0 1349190.0 True False 954162.1922162252 1113458.258319557 977452.5088679476 989992.5409814432 1159434.5799400695 1147403.6507091662 1200639.2841760693 1456918.697921032 1410408.5293619279 1337237.2262539368 0.7135324783689749 0.832655744589715 0.7309492210339744 0.740326788355088 0.8670373193154711 0.8580404644607749 0.8978506285974962 1.0894990576970134 1.0547182666406687 1.0 20.350823991958983 -6.779218983821613 1.0952842221117605 1.0602307440315795 0.7652348747351814 0.8411917299556511 0.05063386136372573 0.1882432633832384 0.4466370874029847 0.035849716335921725 0.020025771461695426 1.6625741210901924e-07 6.779218983821613 -0.2949958692963981 SWSLATFR ddPTM_KYSE-520_SHP099_60min_R1 1 SWSLATFR 8 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 122.13 0.010639000000000001 0.0 162240.0 198220.0 132050.0 145570.0 193880.0 160590.0 138870.0 136430.0 128960.0 119650.0 False True 153240.22378257808 188697.2136657141 140562.15428747024 159404.9290327835 209137.25297369933 159587.69824216407 152908.33484059275 135956.75617300154 105544.11481704746 118589.99408629151 1.2921851035010044 1.5911731433969831 1.185278364928417 1.34416845418504 1.7635320297049808 1.3457096399384316 1.289386478334164 1.1464437385339035 0.8899917369103563 1.0 16.85562276348549 -7.30612308432327 1.6878167259292436 0.9483637038305325 1.427414648925423 0.5921373016578654 0.15596329637655565 0.27882206492255923 1.4341087313259717 0.1262244680083639 0.047643337626095066 4.941706131934156e-08 7.30612308432327 0.47905094509489043 SWSS(ph)TPTAGGIEGSVK ddPTM_KYSE-520_SHP099_60min_R1 1 SWSSTPTAGGIEGSVK 16 0 B5MCH3;Q8N3C7 B5MCH3 CLIP4 CAP-Gly domain-containing linker protein 4 1 SWS(0.056)S(0.887)T(0.056)PTAGGIEGSVK 323.77 1.6654e-47 454590000.0 470530.0 502290.0 462510.0 409240.0 449070.0 547920.0 486550.0 650340.0 774040.0 549800.0 True False 444428.76292170014 478159.2344473386 492324.1346421655 448134.046557507 484409.2541412179 544500.2280393962 535735.2222704008 648084.1223304963 633493.8479605111 544929.199737928 0.8155715699130064 0.8774703845514226 0.9034644039609884 0.8223711388067064 0.8889398005725958 0.9992127937010201 0.9831281247693301 1.1892996790081694 1.1625250551175756 1.0 19.055709273459943 -6.672079632387195 1.366848404051372 1.1252517957116153 0.8593380875083547 0.7590725629369567 0.060505164524382746 0.1947650070890252 0.7408390388003602 0.03477087828317138 0.02203000777450847 2.127748865440253e-07 6.672079632387195 -0.26591370820326055 SWT(ph)WPQTAGR ddPTM_KYSE-520_SHP099_60min_R1 1 SWTWPQTAGR 10 0 H0YL99;P82912-3;P82912 H0YL99 MRPS11 28S ribosomal protein S11, mitochondrial 1 SWT(1)WPQTAGR 147.58 0.007741199999999999 0.0 138100.0 116820.0 106920.0 105540.0 97477.0 111370.0 89862.0 111150.0 133530.0 114930.0 True False 130439.31770447518 111207.7918496051 113812.23427804864 115570.48986824202 105147.8853317377 110674.89851939597 98946.1279286048 110764.44659260506 109284.31801737251 113911.80961418687 1.1450903830451475 0.9762621823519428 0.9991258559013724 1.014561091248335 0.923063953490581 0.9715840604608588 0.8686204552779029 0.9723701780154159 0.9593765421470573 1.0 16.79755779820466 -1.0000000148221901 0.8384388267263947 0.9520276102212495 61.141928933766415 0.6395555007713611 0.04042602696057312 401.23830820046857 1.1669381128865381 0.01395705173918075 46025.89801238067 0.09999999658706465 1.0000000148221901 60.189901323545165 SWVIDQK ddPTM_KYSE-520_SHP099_60min_R1 2 SWVIDQK 7 0 J3KQ32;Q9NTK5;Q9NTK5-2;Q9NTK5-3;C9JCJ9 J3KQ32 OLA1 Obg-like ATPase 1 0 ; 101.64 0.036472000000000004 1595460000.0 2313810.0 2564820.0 1723590.0 1445330.0 2441270.0 2410160.0 1675000.0 1978190.0 2062650.0 1966190.0 False True 2185458.346834116 2441602.1973266895 1834695.369241506 1582693.7286456884 2633384.0600737766 2395117.297436539 1844325.3464246623 1971328.1206030163 1688124.755175117 1948771.0862726746 1.121454624521417 1.2528932795265504 0.941462741399065 0.8121496361447123 1.351304972976857 1.2290398365964934 0.946404305470387 1.0115750046217513 0.8662509245269623 1.0 20.894133202713654 -6.790217225464951 24.88326321660646 0.9570220095998992 1.112851194429507 0.21976072378559253 0.14933737948649106 369.7186891524932 319680.1423872384 0.06736307960547035 0.04542538623418944 1.6209991030325354e-07 6.790217225464951 0.15582918482960773 SWVIGS(ph)PEILR ddPTM_KYSE-520_SHP099_60min_R1 10 SWVIGSPEILR 11 0 Q6P0Q8;Q6P0Q8-2;A0A669KBJ4;E7ERL6 Q6P0Q8 MAST2 Microtubule-associated serine/threonine-protein kinase 2 1 SWVIGS(1)PEILR;SWVIGS(1)PEILR;SWVIGS(1)PEILR;SWVIGS(1)PEILR;SWVIGS(1)PEILR;SWVIGS(1)PEILR;SWVIGS(1)PEILR;SWVIGS(1)PEILR;SWVIGS(1)PEILR;SWVIGS(1)PEILR 221.09 7.113e-10 3525546000.0 3073240.0 2678343.0 2560826.0 2513587.0 2708241.0 2504241.0 2241397.0 2498415.0 3075403.0 2499571.0 True False 2902761.2508479496 2549671.382005198 2725900.9414264727 2752477.552742512 2921364.1589165702 2488611.1030179644 2467979.282686691 2489748.581499445 2516987.339800655 2477426.74557681 1.171683988650938 1.0291611594802443 1.1002952746406276 1.1110227810597333 1.1791929525796734 1.0045145058117755 0.9961865823451745 1.004973642891615 1.015968421385002 1.0 21.24041096867115 -6.288621624784107 23.568500660900387 1.0041305639685332 1.11191930893779 0.678218963459695 0.03911976074616932 231.26688427530559 200519.93796261953 0.013874010446200282 0.012240047214327606 5.144917027071032e-07 6.288621624784107 0.10778874496925672 SYDNLT(ph)TACDNTVPLASR ddPTM_KYSE-520_SHP099_60min_R1 1 SYDNLTTACDNTVPLASR 18 0 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 S(0.45)YDNLT(0.519)T(0.03)ACDNTVPLASR 104.78 0.0019654 661770000.0 143100.0 140920.0 135860.0 118590.0 124560.0 129950.0 123620.0 153770.0 170240.0 150750.0 True False 135161.95773722246 134149.99167476755 144617.75298368576 129860.75794461639 134362.1633505468 129138.9338474952 136116.71601493558 153236.6077601878 139328.7074011645 149414.4722817252 0.9046108832240212 0.8978380047538096 0.9678965549669439 0.8691310551213557 0.8992580256697165 0.864300036505166 0.9110008818843442 1.025580758142731 0.9324980724655392 1.0 17.188960368734435 -7.152104186408551 6.635247370915279 0.9838551777624852 0.9009394526924978 0.5632150488774803 0.03396191806177038 0.17906372008678856 9.427522818168766 0.01583655464827868 0.009080221959045657 7.045240347354014e-08 7.152104186408551 -0.08291572506998746 SYDS(ph)LHRPK ddPTM_KYSE-520_SHP099_60min_R1 4 SYDSLHRPK 9 1 Q8N8S7 Q8N8S7 ENAH Protein enabled homolog 1 SYDS(1)LHRPK;S(0.018)YDS(0.982)LHRPK;SYDS(1)LHRPK;S(0.01)YDS(0.99)LHRPK 109.24 0.00065709 2845510000.0 4055540.0 3626480.0 4087150.0 4579230.0 2691640.0 3656080.0 2992700.0 3087000.0 4031500.0 3501030.0 True False 3830571.111681439 3452258.457342547 4350614.228671214 5014438.642404294 2903456.7546633403 3633261.0485659847 3295231.3219373683 3076291.9175112136 3299481.225844657 3470013.5979601215 1.1039066572918546 0.9948832648298519 1.253774403428494 1.4450775193941823 0.836727774314822 1.0470451904574176 0.9496306653883142 0.8865359834092983 0.9508554167581034 1.0 21.72650988563526 -5.7859686991658315 24.999999811266473 0.9447798443332559 1.1886847470920128 0.5190562146875437 0.11973137894374808 204.9646915674681 208896.58169913176 0.03953502702008041 0.044848766519910176 1.6369344956848177e-06 5.7859686991658315 0.24390490275875687 SYDY(ph)DLIIIGGGSGGLAAAK ddPTM_KYSE-520_SHP099_60min_R1 3 SYDYDLIIIGGGSGGLAAAK 20 0 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;E9PKD3;A0A0B4J225;E9PQI3;E9PLT3;E9PKI4;E9PIZ5 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic 1 S(0.002)Y(0.001)DY(0.997)DLIIIGGGSGGLAAAK;SYDY(1)DLIIIGGGSGGLAAAK;SYDY(0.999)DLIIIGGGSGGLAAAK 341.16 4.490899999999999e-65 98972000.0 326170.0 379197.0 293449.0 248033.0 238867.0 323048.0 255702.0 325843.0 357455.0 320178.0 True False 308076.69989622495 360979.80693369877 312365.19207500113 271605.9817461596 257664.4739326838 321031.73760342895 281550.85357103235 324712.7266853277 292550.1827072556 317341.472014715 0.9708050383088269 1.1375122345085746 0.98431884774429 0.8558792521563816 0.8119470559484138 1.0116286899574942 0.8872173302264663 1.0232281479751593 0.9218781927553741 1.0 18.275676547725876 -4.996040521988878 24.84811432396243 0.9272905868642832 1.055847904408608 0.3056287063129056 0.0745277201219025 120.24723417765206 754596.6587634392 0.019349688908211732 0.039994616401896506 1.0091587217986729e-05 4.996040521988878 0.12855731754432476 SYELPDGQVITIGNER ddPTM_KYSE-520_SHP099_60min_R1 8 SYELPDGQVITIGNER 16 0 P60709;A0A2R8Y793;Q6S8J3;P63267-2;A5A3E0;A0A2R8YEA7;Q9BYX7;P63261;P68133;P68032;P63267;P62736;Q562R1 P60709;P63261;P68133;Q562R1 ACTB;POTEE;ACTG2;POTEF;POTEKP;ACTG1;ACTA1;ACTC1;ACTA2;ACTBL2 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;POTE ankyrin domain family member E;Actin, gamma-enteric smooth muscle;POTE ankyrin domain family member F;Putative beta-actin-like protein 3;Putative beta-actin-like protein 3, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed;Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, aortic smooth muscle;Beta-actin-like protein 2 0 ;;;;;;; 379.37 1.0638e-72 11496170000.0 5096230.0 7122160.0 4646070.0 3536424.0 5993870.0 7267290.0 5140820.0 5564720.0 5347630.0 5938340.0 False True 4813531.962817357 6780000.743019887 4945563.106174836 3872524.6736953533 6465553.468544819 7221932.147445645 5660504.255168269 5545417.285135409 4376635.194782006 5885730.927558614 0.8178307880639045 1.1519386167101278 0.8402632004494712 0.6579513609028789 1.0985132599710457 1.2270238371976145 0.9617334405594773 0.9421798844337645 0.7436009645445043 1.0 22.488790158773746 -3.9827020429378837 18.141538835248102 0.9578545156298173 0.5297046454244594 0.05918413871313366 0.16781443287829642 94201572.11104171 2094382700.8958318 0.04405666926399998 1110109702.1034088 0.00010406338702043925 3.9827020429378837 -0.4281498702053579 SYESSEDCSEAAGS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 2 SYESSEDCSEAAGSPAR 17 0 Q6P6C2-3;Q6P6C2;K7ER58 Q6P6C2-3 ALKBH5 RNA demethylase ALKBH5 1 SYESSEDCSEAAGS(1)PAR;SYESSEDCSEAAGS(1)PAR 219.72 3.7676999999999996e-18 94972000.0 89284.0 106562.0 86846.0 69113.0 74623.0 103944.0 81304.0 93455.0 102447.0 97759.0 True False 84331.23853675857 101442.60156717715 92444.23211851297 75681.47874041884 80495.4055532101 103295.24693993089 89523.0017705737 93130.82641756108 83845.20727870698 96892.93131535103 0.8703549102286032 1.0469556467129537 0.9540864422569777 0.7810835910630397 0.8307665426204004 1.0660761888165264 0.9239373869205081 0.9611725556578975 0.8653387418512658 1.0 16.564103799284045 -6.234673619305787 24.993758805927218 0.9584178381259193 0.9017704091557744 0.13839907240255278 0.08221260715938099 2006.249516013546 1873427.9003416635 0.029060147689377553 0.02905429223563787 5.825408440076109e-07 6.234673619305787 -0.05664742897014485 SYKYS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 SYKYSPK 7 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;A0A1W2PNU4;A0A286YES2;F8VYC4;P0DJD0;P0DJD1 P49792 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 SYKYS(1)PK 81.017 0.0090575 2600400000.0 4589700.0 4491900.0 3479200.0 4238600.0 4069600.0 3835800.0 3699700.0 3851500.0 4435900.0 3562200.0 True False 4335100.191659885 4276102.381520643 3703474.798916823 4641435.269618447 4389854.367143423 3811859.3493822357 4073701.7815924413 3838140.0454468564 3630452.379939054 3530641.6793496674 1.227850511428392 1.2111402883308982 1.0489523251759127 1.314615214782539 1.2433587902219576 1.0796505835404877 1.153813428708745 1.087094186843064 1.0282698471422824 1.0 21.751498980436814 -7.285117911435724 0.8600788302328509 1.0001651860112144 1.2006775876712732 0.5149233236789055 0.06997908334086289 0.5213891155395842 0.7061652652466054 0.06559341686218548 0.02802619973498807 5.186592032597351e-08 7.285117911435724 0.2005124016600588 SYLLGNSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 SYLLGNSSPR 10 0 P02545-3;P02545;P02545-5;P02545-4;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 1 SYLLGNSS(1)PR;SYLLGNS(0.007)S(0.993)PR;SYLLGNS(0.008)S(0.992)PR 144.88 0.00020281 1344760000.0 2699580.0 2328550.0 1857800.0 1811470.0 1773640.0 1799060.0 1777470.0 1970580.0 2403570.0 1884590.0 True False 2549828.9159206916 2216682.9627751946 1977556.7605850985 1983631.5641616853 1913215.377368849 1787831.3992125764 1957154.0140354903 1963744.5179168307 1967142.2770689405 1867893.998788831 1.3650822357018315 1.186728456867747 1.0587093067740323 1.061961527499901 1.0242633568122201 0.9571375037190717 1.047786445753633 1.051314752973215 1.053133785077988 1.0 20.832981155120763 -4.272586663626109 1.2768824202404414 1.0253993821290748 1.5179982692125096 0.9312748145523967 0.028791947269353503 0.3399294346027896 0.4883800326867319 0.009153638969953389 0.21906107677351422 5.3384273442747695e-05 4.272586663626109 0.4925988870834348 SYQNS(ph)PSSDDGIRPLPEYSTEK ddPTM_KYSE-520_SHP099_60min_R1 1 SYQNSPSSDDGIRPLPEYSTEK 22 1 Q15648 Q15648 MED1 Mediator of RNA polymerase II transcription subunit 1 1 S(0.004)YQNS(0.332)PS(0.332)S(0.332)DDGIRPLPEYSTEK 90.97399999999999 0.0017289000000000002 214830000.0 160000.0 157640.0 121140.0 139810.0 140260.0 157580.0 117190.0 179820.0 198040.0 144710.0 True False 151124.48104790767 150066.73777753586 128948.87823085315 153097.50036459058 151297.66402976625 156596.48476866705 129036.7088641828 179196.2463903035 162080.92818213458 143427.98198267634 1.0536610705863583 1.0462863362022439 0.8990496585696087 1.0674172378935245 1.0548685266173545 1.091812647741089 0.8996620260596586 1.249381354413446 1.1300509561775136 1.0 17.12996698752446 -7.26494594987193 24.999128949372086 1.1422871061068705 1.0191425749833993 0.2575958186498708 0.08448578873552315 378.40951877150997 2697736.3689308832 0.042526282547767066 0.021701958256862768 5.4331794593024264e-08 7.26494594987193 -0.12314453112347112 SYS(ph)CSSPK ddPTM_KYSE-520_SHP099_60min_R1 4 SYSCSSPK 8 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 S(0.021)YS(0.969)CS(0.009)S(0.001)PK;SYS(0.964)CS(0.012)S(0.024)PK;SYS(0.999)CSSPK;S(0.014)YS(0.978)CS(0.007)S(0.001)PK 155.06 0.00031488 2505630000.0 2292960.0 2404940.0 2438120.0 2458850.0 2293980.0 2114360.0 2358690.0 2494640.0 2703170.0 2703060.0 True False 2165764.9378975625 2289403.072511463 2595285.1163299317 2692538.3647197885 2474503.175039237 2101163.4949579793 2597129.4037960526 2485986.6760933534 2212342.469370332 2679112.9913488566 0.8083888006556834 0.8545377070337052 0.9687105861941567 1.0050111262250916 0.9236277764430516 0.7842758038734692 0.9693989809994809 0.9279140835496194 0.8257742306928537 1.0 21.353323997320853 -9.381417421156756 0.009746258016572057 1.878264110513161 2.513641622113084e-06 0.10421427422023644 0.07380300312686337 13291.182422317468 32.17371421352083 3236.612748925588 2965.0036898993662 4.155110510022047e-10 9.381417421156756 -1.8782615968715388 SYS(ph)EPEKMNEVGIVEEAEPAPLGPQR ddPTM_KYSE-520_SHP099_60min_R1 5 SYSEPEKMNEVGIVEEAEPAPLGPQR 26 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 S(0.172)Y(0.152)S(0.676)EPEKMNEVGIVEEAEPAPLGPQR;S(0.053)YS(0.947)EPEKMNEVGIVEEAEPAPLGPQR;S(0.002)YS(0.998)EPEKMNEVGIVEEAEPAPLGPQR;S(0.001)YS(0.999)EPEKMNEVGIVEEAEPAPLGPQR;S(0.004)YS(0.996)EPEKMNEVGIVEEAEPAPLGPQR 282.19 5.6146e-49 1564250000.0 1652530.0 1722250.0 1428630.0 1246670.0 1306780.0 1575920.0 1198940.0 1432930.0 2271900.0 1570250.0 True False 1560860.866663116 1639510.5248500458 1520721.7756888203 1365153.141974996 1409616.1514388868 1566084.0987221561 1320140.5557267987 1427959.500278375 1859380.2299383525 1556338.806636014 1.0029055755776446 1.0534406247915935 0.9771148603406099 0.877156783699135 0.9057257619153862 1.0062616777558906 0.8482346839247993 0.9175119801612301 1.1947143012885186 1.0 20.56972473083449 -7.744658598946862 24.99594707390374 1.0973572017640933 0.9477663254675043 0.3916826758916888 0.07417701406433409 214.26880475220665 319168.6552098768 0.05181225473293653 0.019468498420173848 1.8002855724675265e-08 7.744658598946862 -0.14959087629658907 SYS(ph)FDEIRK ddPTM_KYSE-520_SHP099_60min_R1 2 SYSFDEIRK 9 1 P43490 P43490 NAMPT Nicotinamide phosphoribosyltransferase 1 S(0.023)YS(0.977)FDEIRK;S(0.056)YS(0.944)FDEIRK 133.07 0.00034186 539860000.0 554900.0 625250.0 451560.0 502180.0 580760.0 498830.0 500300.0 453850.0 578000.0 420480.0 True False 524118.5908342738 595212.0514806159 480668.28012154606 549907.0362140778 626462.5079276129 495716.61693840695 550875.2064574682 452275.7002793861 473049.7701942734 416754.87432849023 1.2576183822175488 1.4282065745233827 1.1533597079003297 1.3194975514086869 1.5031917957456906 1.189468072178271 1.3218206681927445 1.085231938818064 1.1350791540386662 1.0 18.668839547381957 -7.411330097298793 1.2193697673056791 1.02606254370033 1.321967068479581 0.5263110162734483 0.10223101762179061 0.37150601662071964 0.972071150706824 0.0895372324029345 0.0320689244011465 3.87855453870732e-08 7.411330097298793 0.2959045247792511 SYS(ph)HDVLPK ddPTM_KYSE-520_SHP099_60min_R1 1 SYSHDVLPK 9 0 B7Z3B9;Q13480;Q13480-2 B7Z3B9 GAB1 GRB2-associated-binding protein 1 1 S(0.439)YS(0.561)HDVLPK 80.763 0.058849 0.0 440700.0 449340.0 363390.0 655060.0 420350.0 432580.0 502540.0 487670.0 624540.0 413040.0 True False 416253.49248633016 427753.03192690935 386814.7008445573 717316.7054490297 453429.15353566397 429880.10776259657 553341.647517762 485978.38659303344 511139.27937219985 409380.78694025695 1.016788051040305 1.0448781319806626 0.9448775154682753 1.752199244156789 1.1075975424362923 1.0500739689704373 1.351655146430978 1.1871059954358698 1.2485668494422848 1.0 18.643083869820984 SYS(ph)LSELSVLQAK ddPTM_KYSE-520_SHP099_60min_R1 8 SYSLSELSVLQAK 13 0 Q9P0V3;Q9P0V3-2 Q9P0V3 SH3BP4 SH3 domain-binding protein 4 1 S(0.022)Y(0.014)S(0.954)LS(0.01)ELSVLQAK;SYS(1)LSELSVLQAK;SYS(0.989)LS(0.011)ELSVLQAK;SYS(0.855)LS(0.145)ELSVLQAK;SYS(0.988)LS(0.011)ELSVLQAK;S(0.001)YS(0.999)LS(0.001)ELSVLQAK;SYS(0.999)LS(0.001)ELSVLQAK;S(0.245)Y(0.003)S(0.729)LS(0.006)ELS(0.017)VLQAK 265.12 3.6091e-22 4684935000.0 6609471.0 7586196.0 5750336.0 5414344.0 5422565.0 7328140.0 5810180.0 6789875.0 8308180.0 7690731.0 True False 6242830.467976222 7221743.757047651 6121011.8594229 5928921.625878115 5849290.015325603 7282402.360024486 6397529.696292327 6766322.50839373 6799623.94417415 7622597.106638174 0.8189899558694536 0.947412496819301 0.8030087086843917 0.7778086055099104 0.7673618234698147 0.9553702311883403 0.8392847748336336 0.8876662919126668 0.8920350700750885 1.0 22.86185119361764 -6.264436194750322 24.991796349766297 0.9031262588843041 0.8262208108650675 0.3514353253609791 0.06135010451174686 385.02363868562713 3210873.861081379 0.021924491626406202 0.020186816930877885 5.439560422491331e-07 6.264436194750322 -0.0769054480192366 SYS(ph)PAHNR ddPTM_KYSE-520_SHP099_60min_R1 3 SYSPAHNR 8 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 S(0.081)YS(0.919)PAHNR;S(0.26)Y(0.001)S(0.74)PAHNR;S(0.433)Y(0.001)S(0.565)PAHNR 110.38 0.00072012 3525490000.0 699010.0 770160.0 705490.0 829260.0 689330.0 701880.0 683550.0 665800.0 879820.0 616340.0 True False 660234.5218581114 733160.3575662711 750967.0142239113 908072.6210738897 743576.3492488153 697499.3065708344 752649.9048051217 663490.4951988884 720066.8664573106 610879.7071052636 1.0807930173138707 1.2001714069705327 1.229320610079635 1.486499895989204 1.2172222134736685 1.1417948549576633 1.2320754741905824 1.0861229919437463 1.1787375780895477 1.0 19.220528790571347 -7.842136374682864 0.6892257724486271 1.0089825137380708 1.2426035839526375 0.3024158135984949 0.10334987573130018 0.9016515723501148 0.9939187234827102 0.10747883733961558 0.044920557257588145 1.4383468458393734e-08 7.842136374682864 0.23362107021456668 SYS(ph)PDGK ddPTM_KYSE-520_SHP099_60min_R1 13 SYSPDGK 7 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 SYS(1)PDGK;S(0.008)YS(0.992)PDGK;SYS(1)PDGK;SYS(1)PDGK;SYS(1)PDGK;SYS(1)PDGK;S(0.008)YS(0.992)PDGK;S(0.001)YS(0.999)PDGK;SYS(1)PDGK;SYS(1)PDGK;SYS(1)PDGK;SYS(1)PDGK;SYS(1)PDGK 165.15 0.0008212 128627380000.0 61653160.0 51587110.0 49326550.0 52028880.0 57547130.0 54962780.0 55484600.0 50721040.0 59433090.0 54791400.0 True False 58233136.31227255 49108787.80176924 52506218.33827045 56973689.11214686 62075761.73261998 54619736.90261197 61093524.84551278 50545100.55061976 48641539.04227598 54305990.82306422 1.0723151429462627 0.9042977958319898 0.9668586751200681 1.0491234622304257 1.143073918582402 1.0057773751071033 1.1249868369875287 0.9307463096530562 0.8956937955658751 1.0 25.694608023456293 -7.310960915546237 24.739296164454018 0.9349149111691104 1.033401215427857 0.2761607355639032 0.07058890625787886 479.04851607096396 239313.89048785923 0.04058610162688346 0.019496966693917622 4.886963377279239e-08 7.310960915546237 0.0984863042587465 SYS(ph)PDGKES(ph)PSDK ddPTM_KYSE-520_SHP099_60min_R1 5 SYSPDGKESPSDK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 S(0.269)Y(0.005)S(0.726)PDGKES(0.99)PS(0.009)DK;S(0.002)YS(0.998)PDGKES(0.998)PS(0.002)DK;S(0.321)Y(0.086)S(0.593)PDGKES(0.911)PS(0.089)DK;S(0.075)Y(0.003)S(0.922)PDGKES(0.948)PS(0.052)DK;S(0.46)Y(0.006)S(0.534)PDGKES(0.97)PS(0.03)DK 270.99 1.1142e-33 1557060000.0 3615690.0 3185300.0 3106820.0 3335540.0 3480070.0 3571810.0 3219180.0 3601140.0 4177850.0 3391310.0 True False 3415120.4680006797 3032273.406767223 3307090.588287758 3652548.7187333344 3753931.7101102904 3549517.0088943513 3544606.1305691637 3588648.4858523924 3419257.755027928 3361265.6317992574 1.016022189883456 0.9021225154240703 0.9838825462055197 1.086658752637219 1.116820900614404 1.0560060994031955 1.0545450788046662 1.0676479870861675 1.017253061668211 1.0 21.680573128791405 -5.124028493650481 4.795481323914297 1.0618195202146619 0.9557073938044566 0.5116190684510828 0.04025568192554635 0.15793946839585857 5.464648338826125 0.010799876906976966 0.019423661707649253 7.515735823681933e-06 5.124028493650481 -0.10611212641020529 SYS(ph)PDGKES(ph)PSDKK ddPTM_KYSE-520_SHP099_60min_R1 9 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 S(0.355)Y(0.002)S(0.644)PDGKES(0.991)PS(0.009)DKK;S(0.002)YS(0.998)PDGKES(0.992)PS(0.008)DKK;S(0.091)YS(0.909)PDGKES(0.624)PS(0.376)DKK;S(0.013)YS(0.987)PDGKES(0.611)PS(0.389)DKK;S(0.059)Y(0.011)S(0.93)PDGKES(0.998)PS(0.002)DKK;S(0.106)Y(0.012)S(0.882)PDGKES(0.908)PS(0.093)DKK;S(0.055)YS(0.945)PDGKES(0.945)PS(0.055)DKK;S(0.376)Y(0.006)S(0.62)PDGKES(0.721)PS(0.277)DKK;S(0.048)Y(0.004)S(0.948)PDGKES(0.921)PS(0.079)DKK 175.8 1.0788e-08 237362100000.0 48171220.0 41923900.0 39020900.0 41652720.0 41356720.0 38534310.0 39668350.0 42199220.0 49534500.0 35986520.0 True False 45499066.399653636 39909812.91494315 41536249.649647444 45611381.98545308 44611258.57645173 38293803.0777135 43678413.94378797 42052840.755192 40540283.463128366 35667707.42988888 1.275637535411829 1.1189340664351044 1.164533765768215 1.2787864786406646 1.250746453613341 1.0736267014914447 1.2245926943761534 1.1790172059096933 1.136610294979496 1.0 25.08811515263125 -8.988915513065873 0.48890226485673843 0.9787410042612494 1.2031886592260161 0.4815175656535099 0.06215688511633351 3.7959152197580517 1.152692781713134 0.21841509717483354 0.03323958466432697 1.025851474299264e-09 8.988915513065873 0.2244476549647667 SYS(ph)PDGKESPS(ph)DK ddPTM_KYSE-520_SHP099_60min_R1 1 SYSPDGKESPSDK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 2 S(0.059)Y(0.001)S(0.94)PDGKES(0.313)PS(0.687)DK 172.82 6.7351999999999995e-06 0.0 419630.0 414450.0 314140.0 379490.0 369380.0 373990.0 382480.0 395490.0 450360.0 369070.0 True False 396352.28738833364 394539.19989786705 334389.96704177157 415556.6155021707 398448.1045152936 371655.7896854538 421144.8110450781 394118.1374980598 368585.9766517177 365800.3269321149 1.083520867005372 1.0785643720080258 0.9141324991320403 1.1360203501930974 1.0892502690114803 1.0160072649536631 1.1512969782644125 1.077413300319986 1.0076152193273455 1.0 18.48069683892511 -4.555229966626348 24.99932118678253 1.0545964690645735 1.082283074767298 0.030833613798989967 0.06641620921394384 795.2912737187952 614556.024218626 0.01694987105225155 0.04484650849199796 2.784646258614954e-05 4.555229966626348 0.02768660570272452 SYS(ph)PDGKESPSDK ddPTM_KYSE-520_SHP099_60min_R1 9 SYSPDGKESPSDK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.163)Y(0.08)S(0.757)PDGKESPSDK;S(0.121)Y(0.001)S(0.878)PDGKESPSDK;SYS(1)PDGKESPSDK;S(0.002)YS(0.902)PDGKES(0.086)PS(0.009)DK;SYS(0.995)PDGKES(0.005)PSDK;SYS(1)PDGKESPSDK;S(0.001)YS(0.996)PDGKES(0.003)PSDK;S(0.002)YS(0.991)PDGKES(0.007)PSDK;S(0.032)YS(0.968)PDGKESPSDK 278.08 1.1462e-22 11827120000.0 17933280.0 17372240.0 16764130.0 14098560.0 14909700.0 14486180.0 12468660.0 13150950.0 21165340.0 13828020.0 True False 16938485.209292635 16537651.514136154 17844772.643356398 15438482.903513383 16083008.565411443 14395766.377244376 13729113.835194826 13105332.423904818 17322247.790802177 13705514.500836782 1.2358883140256038 1.206642152188191 1.3020140646501739 1.1264431483087187 1.1734698879366772 1.0503630765824552 1.0017218860595567 0.9562087160686072 1.2638889105363085 1.0 23.70825315172388 -5.86105015160133 1.4417226312262579 1.0487552695962779 1.239354110052943 0.4612355752561852 0.08571752538257428 0.3558717538132254 1.5393902693235424 0.03304428061017529 0.041773149956547746 1.3770504402273107e-06 5.86105015160133 0.1905988404566652 SYS(ph)PDGKESPSDKK ddPTM_KYSE-520_SHP099_60min_R1 8 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.009)YS(0.991)PDGKESPSDKK;S(0.096)YS(0.904)PDGKESPSDKK;S(0.031)YS(0.865)PDGKES(0.103)PS(0.001)DKK;S(0.016)YS(0.982)PDGKES(0.002)PSDKK;S(0.456)YS(0.543)PDGKES(0.001)PSDKK;S(0.01)YS(0.984)PDGKES(0.006)PSDKK;SYS(1)PDGKESPSDKK;SYS(0.995)PDGKES(0.005)PSDKK 206.62 4.5608e-12 61315700000.0 25420000.0 25050200.0 25805300.0 19934200.0 22437300.0 20112200.0 17728300.0 18106900.0 30604000.0 19043700.0 True False 24009901.92648633 23846750.790883202 27468750.927939843 21828740.374564257 24202987.85922628 19986672.299558226 19520449.575534537 18044091.39008223 25047085.06405802 18874987.6337744 1.2720486175855104 1.2634048431487426 1.4552990158673267 1.1564903139594376 1.282278342578519 1.058897239423596 1.034196681570544 0.9559789781157055 1.3269987535906744 1.0 24.1699723634467 -6.117972049584399 1.94451293315294 1.0676480834324276 1.3021405401829427 0.4413698730040465 0.11635411636653896 0.3119444344257325 2.335742584951791 0.043855556065135505 0.044397509038515755 7.621280576449009e-07 6.117972049584399 0.2344924567505151 SYS(ph)PDHR ddPTM_KYSE-520_SHP099_60min_R1 2 SYSPDHR 7 0 Q14241;A0A024RAC6 Q14241 TCEB3 Transcription elongation factor B polypeptide 3 1 S(0.14)Y(0.001)S(0.858)PDHR;S(0.027)YS(0.973)PDHR 91.069 0.0072524 395100000.0 547610.0 631580.0 639860.0 710770.0 529530.0 510660.0 557840.0 553170.0 650280.0 545240.0 True False 517232.98166652897 601237.9487790933 681106.3994121982 778321.3670992065 571200.998386441 507472.78152029077 614231.911193752 551251.1823808493 532205.5442247962 540409.5977903017 0.9571128710175757 1.1125597162550678 1.260352151770058 1.4402434195871243 1.0569778936607406 0.939052125638243 1.1366043713977412 1.0200617913428593 0.9848188233535243 1.0 19.043693771901133 -5.9757153056126775 24.98644420180472 1.0219058732847512 1.198808639202085 0.318889044305963 0.12239823705942929 293.37198885800257 301848.08919723536 0.04050072992296322 0.04592137486597879 1.0575105151405342e-06 5.9757153056126775 0.17690276591733367 SYS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 4 SYSPER 6 0 F8W0Q9;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8;F8WF16;B7Z8L1;F8W6A0;Q8NEY8-5;Q8NEY8-6;Q8NEY8-3;F8VWU8 F8W0Q9 PPHLN1 Periphilin-1 1 S(0.003)YS(0.997)PER;S(0.001)YS(0.999)PER;S(0.01)YS(0.989)PER;S(0.015)Y(0.001)S(0.984)PER 99.79899999999999 0.012255 4306110000.0 2635690.0 2404200.0 2420870.0 2249620.0 2544680.0 2304520.0 2151680.0 2324550.0 2770720.0 2364970.0 True False 2489483.021582246 2288698.6232222295 2576923.153728951 2463423.2084270865 2744931.838751357 2290136.635861709 2369192.8127731467 2316486.678604051 2267627.0921672587 2344018.205718816 1.0620578865422343 0.9763996788243281 1.0993614074506355 1.050940305163566 1.171036910914093 0.9770131606803866 1.010739936657877 0.9882545591806434 0.9674101876149332 1.0 21.16055234437369 SYS(ph)PGRR ddPTM_KYSE-520_SHP099_60min_R1 3 SYSPGRR 7 1 J3QK89;Q8IWX8 J3QK89 CHERP Calcium homeostasis endoplasmic reticulum protein 1 SYS(1)PGRR;SYS(1)PGRR;S(0.006)Y(0.001)S(0.993)PGRR 85.86200000000001 0.005499800000000001 3741960000.0 2004340.0 1831780.0 1646900.0 1441350.0 1570840.0 1561580.0 1475880.0 1323900.0 1978000.0 1483960.0 True False 1893155.2646472694 1743778.5392421668 1753061.8091331685 1578335.470642319 1694456.171143006 1551833.5999813105 1625076.3536007348 1319307.699900584 1618845.061322269 1470813.2689034084 1.2871486168048685 1.185587984627221 1.1918996423252257 1.0731039106133953 1.1520539058002506 1.0550853958084756 1.1048828481213935 0.8969919756599816 1.1006462176733205 1.0 20.48818266627228 -2.6635007466833005 0.26350899612124595 0.9840304594018137 1.9194448321945174 0.6665586666692958 0.05980311331048186 12.116533293685164 0.35842549992912187 0.07131537089831648 4.274413034064337 0.002170197472340645 2.6635007466833005 0.9354143727927038 SYS(ph)PRK ddPTM_KYSE-520_SHP099_60min_R1 1 SYSPRK 6 1 P35251-2;P35251;A0A1W2PP02 P35251-2 RFC1 Replication factor C subunit 1 1 S(0.127)Y(0.014)S(0.859)PRK 48.56100000000001 0.06464099999999999 404760000.0 319230.0 381060.0 345180.0 262240.0 293970.0 337140.0 285410.0 254640.0 379840.0 321450.0 True False 301521.67553077213 362753.30561727856 367430.85510752717 287163.21075466886 317103.7665395007 335035.78420426644 314262.0281331725 253756.71327342247 310870.63098718424 318602.2030843155 0.9463891731187334 1.1385775180006485 1.1532589905233315 0.9013221125739467 0.9952968418601352 1.0515802494799507 0.9863774484007745 0.7964687965646859 0.9757328354220915 1.0 18.28139671734469 -6.099445857931118 0.7708803872124811 0.9269109537563189 1.067748661025146 0.17629600167768134 0.09070507561808776 1.024473572162417 1.3500468697618067 0.06124617369876076 0.07083496292816395 7.953424120834866e-07 6.099445857931118 0.14083770726882716 SYS(ph)PSFQR ddPTM_KYSE-520_SHP099_60min_R1 2 SYSPSFQR 8 0 Q9P227;Q9P227-2 Q9P227 ARHGAP23 Rho GTPase-activating protein 23 1 SYS(0.997)PS(0.003)FQR;S(0.001)YS(0.986)PS(0.013)FQR 166.66 0.00097695 241280000.0 716250.0 699940.0 601210.0 622410.0 647470.0 585960.0 589830.0 618120.0 793310.0 618530.0 True False 676518.1846910237 666313.8317686408 639964.9585700118 681563.65926561 698422.2053996351 582302.8062891748 649455.7725860652 615975.8859902924 649264.9017176792 613050.3054090576 1.1035280118482562 1.086882798833357 1.043902846020108 1.111758126946592 1.1392575768045872 0.9498450635313418 1.059384143284483 1.004772170497954 1.0590727971083178 1.0 19.225645937237726 -6.250696673703872 24.9977595476477 1.0177111753405288 1.0943628790126199 0.5553755840715575 0.036794881178513206 597.6505462729771 1390705.630060905 0.012097002454439603 0.011973047554403078 5.614399682300788e-07 6.250696673703872 0.07665170367209106 SYS(ph)SER ddPTM_KYSE-520_SHP099_60min_R1 1 SYSSER 6 0 A0A0A0MT33;Q9UPN6;Q9UPN6-2 A0A0A0MT33 SCAF8 Protein SCAF8 1 S(0.015)YS(0.97)S(0.015)ER 77.058 0.0625 0.0 503230.0 415410.0 380420.0 354750.0 484360.0 432300.0 395910.0 385080.0 474770.0 478540.0 True False 475314.8287358652 395453.0800568775 404942.48189352086 388465.33334052353 522476.3763685842 429601.855346457 435932.44650924695 383744.24735834723 388563.73597774265 474300.50789848657 1.0021385615669542 0.8337606084569393 0.8537677593636264 0.8190278670830896 1.1015724581100568 0.9057587925636454 0.9191060082156787 0.8090740806047779 0.8192353360517717 1.0 18.855441887746167 -10.148288811669557 4.894132615376785 1.0000071205005234 0.8950703526600162 0.10951404889797622 0.08899001826678951 7.101774246133426e-06 1.2358664520782294e-06 0.08850415119702533 0.02146395313844236 7.107407043341818e-11 10.148288811669557 -0.1049367678405072 SYS(ph)SNLR ddPTM_KYSE-520_SHP099_60min_R1 1 SYSSNLR 7 0 F5H3X8;E9PFI7;Q8N3A8-2;Q8N3A8 F5H3X8 PARP8 Poly [ADP-ribose] polymerase 8 1 S(0.056)YS(0.888)S(0.056)NLR 108.3 0.0082823 0.0 385380.0 363640.0 359760.0 349230.0 379090.0 349290.0 345200.0 364690.0 448050.0 420160.0 True False 364002.20316401665 346170.1885652319 382950.70523635205 382420.714200172 408922.22627295105 347109.9515474532 380096.18482734007 363424.97550928564 366695.41442135634 416437.7092795333 0.8740855956435026 0.8312652309132399 0.9195870035374171 0.9183143257170127 0.9819529239568997 0.8335219021062669 0.9127323879600946 0.8726994876089309 0.8805528564062206 1.0 18.66774118795251 SYS(ph)SPDITQAIQEEEK ddPTM_KYSE-520_SHP099_60min_R1 8 SYSSPDITQAIQEEEK 16 0 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.01)YS(0.981)S(0.01)PDITQAIQEEEK;SYS(0.997)S(0.002)PDITQAIQEEEK;S(0.001)YS(0.983)S(0.015)PDITQAIQEEEK;SYS(0.983)S(0.017)PDITQAIQEEEK;SYS(0.5)S(0.5)PDITQAIQEEEK;SYS(0.5)S(0.5)PDITQAIQEEEK;SYS(0.949)S(0.051)PDITQAIQEEEK;SYS(0.5)S(0.5)PDITQAIQEEEK 407.65 4.291199999999999e-101 3437050000.0 5433080.0 5479830.0 4462860.0 4195850.0 4550190.0 5212650.0 4749980.0 5362150.0 6270060.0 5422370.0 True False 5131696.221823536 5216570.741407481 4750543.096428476 4594622.322471699 4908264.065960379 5180115.917815657 5230154.333737455 5343549.953185218 5131575.159350008 5374332.020340028 0.9548528454144258 0.9706454163353745 0.8839318223082009 0.8549197007335252 0.9132789056173419 0.9638622805979741 0.9731729104087896 0.9942723919850299 0.9548303193641056 1.0 22.357654021546402 -6.358119733132048 3.524033804206357 0.9788667226894683 0.9133661095279516 0.4775582209886131 0.032553937875146044 0.2527886681816105 5.889803657413899 0.013601743910358045 0.011913288604213678 4.3840981340075016e-07 6.358119733132048 -0.06550061316151667 SYS(ph)SPDITQAIQEEEKR ddPTM_KYSE-520_SHP099_60min_R1 11 SYSSPDITQAIQEEEKR 17 1 P40818;P40818-2 P40818 USP8 Ubiquitin carboxyl-terminal hydrolase 8 1 S(0.007)YS(0.987)S(0.007)PDITQAIQEEEKR;S(0.026)YS(0.922)S(0.051)PDITQAIQEEEKR;S(0.02)YS(0.974)S(0.005)PDITQAIQEEEKR;SYS(0.498)S(0.498)PDIT(0.004)QAIQEEEKR;SYS(0.876)S(0.124)PDITQAIQEEEKR;SYS(0.5)S(0.5)PDITQAIQEEEKR;SYS(0.922)S(0.078)PDITQAIQEEEKR;SYS(0.5)S(0.5)PDITQAIQEEEKR;SYS(0.744)S(0.256)PDITQAIQEEEKR;S(0.001)YS(0.77)S(0.229)PDITQAIQEEEKR;S(0.024)YS(0.731)S(0.246)PDITQAIQEEEKR 352.85 7.468399999999998e-60 80336260000.0 18373150.0 17737960.0 16424120.0 16062740.0 16795390.0 16284920.0 15781110.0 16470580.0 20157790.0 16253180.0 True False 17353954.743533514 16885801.776379235 17482845.054721132 17589337.98016112 18117091.640302997 16183279.773695635 17376418.6075915 16413447.402242253 16497643.472533584 16109189.469982706 1.0772705092252008 1.0482092725921215 1.0852715518243825 1.0918822460271183 1.12464327730838 1.0045992570793822 1.0786649843538125 1.018887227866212 1.0241138142471233 1.0 23.941380571225995 -7.192907891607118 0.8887514384845558 1.0042022942100794 1.0798357225980735 0.472625958846814 0.029094507010392377 0.5443573359712525 0.7794446802314157 0.02604040227275229 0.011408992294559212 6.413455834872255e-08 7.192907891607118 0.07563342838799403 SYSLS(ph)ELSVLQAK ddPTM_KYSE-520_SHP099_60min_R1 2 SYSLSELSVLQAK 13 0 Q9P0V3;Q9P0V3-2 Q9P0V3 SH3BP4 SH3 domain-binding protein 4 1 SYS(0.012)LS(0.988)ELSVLQAK;SYS(0.338)LS(0.662)ELSVLQAK 286.74 4.1869e-30 2494750000.0 1634320.0 1866380.0 1561770.0 1450860.0 1375550.0 1760300.0 1412040.0 1732640.0 2102600.0 1883330.0 True False 1543661.011663852 1776716.3033065042 1662444.1931203536 1588749.2981830353 1483797.9591911081 1749313.31474987 1554782.7833823771 1726629.8762412167 1720820.8422326606 1866645.1614085687 0.8269707835092808 0.9518232709883627 0.8906053638313748 0.8511255009946114 0.7949009216467449 0.9371429294198795 0.832928944143374 0.9249909473626489 0.9218789290055164 1.0 20.832016274858297 -8.001810645596963 1.171237053747553 0.9985716304246275 0.8721187981819102 0.41627166118598413 0.04713809625894991 0.5112047310451987 1.578319061762239 0.044467396511272426 0.014085697018516316 9.958395133450177e-09 8.001810645596963 -0.1264528322427173 SYSPDGKES(ph)PSDKK ddPTM_KYSE-520_SHP099_60min_R1 1 SYSPDGKESPSDKK 14 2 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 S(0.002)YS(0.253)PDGKES(0.727)PS(0.018)DKK 84.829 0.0020971999999999996 741580000.0 1430200.0 1590100.0 1493100.0 1084900.0 1351000.0 1265200.0 995470.0 862100.0 1881200.0 1068800.0 True False 1350863.9549669835 1513709.209211239 1589347.6150444662 1188008.569812922 1457316.0138615011 1257303.4174978887 1096101.8224509628 859109.5763156534 1539621.5011928475 1059331.2635138177 1.2752044629421655 1.4289290435838198 1.5003310765818205 1.1214703188049788 1.3756943309947844 1.1868840850853344 1.0347111052072386 0.8109923740624572 1.453390034091791 1.0 20.01472237442104 -6.485267221991291 3.115920817002351 1.0604250718489452 1.3420714702420633 0.33559629245559963 0.17573216130295832 0.2897358017012979 5.674260594825189 0.06799135646168078 0.05545249567521878 3.271393436518183e-07 6.485267221991291 0.2816463983931181 SYSPY(ph)DMLESIR ddPTM_KYSE-520_SHP099_60min_R1 9 SYSPYDMLESIR 12 0 P07355;P07355-2;H0YN42;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 SYS(0.023)PY(0.977)DMLESIR;SYS(0.021)PY(0.978)DMLES(0.001)IR;SYS(0.004)PY(0.996)DMLESIR;SYS(0.004)PY(0.996)DMLESIR;SYS(0.006)PY(0.994)DMLESIR;SYS(0.103)PY(0.897)DMLESIR;SYS(0.003)PY(0.997)DMLESIR;SYS(0.023)PY(0.977)DMLESIR;SYS(0.01)PY(0.99)DMLESIR 254.5 2.2818000000000003e-17 2182575000.0 2225276.0 2165858.0 2044288.0 1845149.0 1955255.0 1969815.0 1886584.0 2002831.0 2525166.0 1958276.0 True False 2101835.5043022726 2061806.9306608634 2176066.0754564498 2020511.4061957258 2109122.4446208514 1957520.653919226 2077298.3220055124 1995883.646725271 2066659.508654658 1940927.1981556749 1.0829028035155042 1.0622793748369603 1.1211477058615134 1.0410031906996173 1.0866571639703955 1.0085492417125788 1.0702608134810112 1.0283145337042097 1.0647795087927345 1.0 20.88831457463513 -2.1379884213035503 0.01169617197518281 0.21895744277333773 1.9978414653675316 0.40885654450209796 0.0272952542395687 7011.590100955453 7.715103968897441 508.2896753187124 675.7216791714418 0.007277992080847012 2.1379884213035503 1.7788840225941938 SYSPY(ph)DMLESIRK ddPTM_KYSE-520_SHP099_60min_R1 4 SYSPYDMLESIRK 13 1 P07355;P07355-2;H0YN42;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 SYS(0.038)PY(0.962)DMLESIRK;SYS(0.438)PY(0.561)DMLESIRK;SYS(0.002)PY(0.998)DMLESIRK;SYS(0.24)PY(0.513)DMLES(0.248)IRK 175.15 4.6455e-08 1077933000.0 1034490.0 1065140.0 916520.0 871790.0 916650.0 892200.0 733640.0 790700.0 1251380.0 916620.0 True False 977104.7774953113 1013969.0755922662 975600.3456838492 954644.6594867781 988785.1399749421 886631.4488552136 807803.4908364116 787957.2462507668 1024160.9367226798 908499.45991957 1.0755149789321998 1.1160921060778983 1.073859026586785 1.050792764996573 1.0883717421939687 0.9759295277222373 0.8891623236715264 0.8673172423465448 1.1273104519108348 1.0 19.793126131249984 -6.310058286437626 4.856881581284606 0.956877004065194 1.0810560090282801 0.38510289803151565 0.06777985564643467 0.2053393805088 11.076956814755322 0.02414038548035147 0.021552067526513573 4.897130908174034e-07 6.310058286437626 0.12417900496308609 SYSPYDMLESIR ddPTM_KYSE-520_SHP099_60min_R1 6 SYSPYDMLESIR 12 0 P07355;P07355-2;H0YN42;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;;;; 223.31 4.059e-10 2044833000.0 1008284.0 1277317.0 797408.0 800800.0 1268708.0 1438554.0 1037128.0 1074448.0 985574.0 1108239.0 False True 952352.4765556765 1215952.7740280943 848810.1955779117 876907.7912307017 1368548.1016389336 1429575.4508814884 1141971.0196338631 1070720.9906660474 806618.6058987038 1098420.8646568959 0.8670196526657882 1.1070007982850096 0.7727549820742409 0.798334972910965 1.2459232573540153 1.301482425252394 1.0396479677127861 0.9747820941115309 0.7343438492955614 1.0 20.066999504374795 -4.218932518343615 21.40475887331367 1.0017417432493454 0.8670172079687847 0.04386208132712366 0.18111493276404447 15475.643851620303 7791825.241577701 0.04894923286228353 13.018358340973636 6.040424795680849e-05 4.218932518343615 -0.13472453528056072 SYSPYDMLESIRK ddPTM_KYSE-520_SHP099_60min_R1 4 SYSPYDMLESIRK 13 1 P07355;P07355-2;H0YN42;A6NMY6;H0YM50;H0YN28;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;; 222.94 5.8632e-11 2112810000.0 1607390.0 2010030.0 1377840.0 1193260.0 2226440.0 1959530.0 1339934.0 1240590.0 1960370.0 1468130.0 False True 1518224.8724474758 1913465.141683461 1466657.7710219463 1306667.0716332993 2401648.1612892677 1947299.8464192534 1475387.6052156345 1236286.6828458812 1604416.2249061354 1455123.5103878553 1.0433649526030964 1.3149846923808117 1.007926654027476 0.8979767437645305 1.6504771891487902 1.3382368111832728 1.0139260308029645 0.8496094482841224 1.1025979674251067 1.0 20.472710183118615 -6.894411152076675 6.975439274336658 0.9725663393546454 1.2098392809874745 0.21244763317552584 0.20503723278686514 0.36020184952462614 21.122086409307197 0.09145395064661267 0.06146340203483854 1.27523095988654e-07 6.894411152076675 0.23727294163282908 SYSVEKS(ph)PQDEGLHLLKPLSIPK ddPTM_KYSE-520_SHP099_60min_R1 1 SYSVEKSPQDEGLHLLKPLSIPK 23 2 Q7RTP6 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 S(0.004)YS(0.003)VEKS(0.994)PQDEGLHLLKPLSIPK 245.11 1.1627e-28 1801000000.0 3429700.0 3535700.0 3017200.0 3620300.0 3381800.0 3342500.0 3000300.0 3173300.0 4418700.0 3028100.0 True False 3239447.704062552 3365839.6648061015 3211693.5396906915 3964372.2235171157 3647928.420190099 3321638.2176625784 3303599.6041062246 3162292.5629537846 3616375.4663623436 3001273.3898261515 1.0793577536267687 1.1214705318801588 1.0701102907112132 1.3208967356841663 1.215460221836507 1.1067429674758766 1.1007326474505494 1.053650285133458 1.2049470330231469 1.0 21.517143311180018 -6.442376668414992 8.666630977501411 1.095617271359614 1.1630054361744975 0.147223755369704 0.08241168402769469 0.8185908366588274 82.1956684442624 0.030401788172584338 0.026756526428225832 3.6109654375438843e-07 6.442376668414992 0.06738816481488352 SYSVGASGS(ph)SSR ddPTM_KYSE-520_SHP099_60min_R1 1 SYSVGASGSSSR 12 0 Q8N684-2;Q8N684;Q8N684-3;F5H669 Q8N684-2 CPSF7 Cleavage and polyadenylation specificity factor subunit 7 1 SYSVGAS(0.152)GS(0.806)S(0.04)S(0.002)R 84.89200000000001 0.0035421999999999997 17502000.0 49634.0 40408.0 59797.0 47346.0 37864.0 44323.0 41961.0 40775.0 47190.0 42524.0 True False 46880.70307707403 38466.73902635544 63651.61029858283 51845.74960490603 40843.681383310075 44046.36371621796 46202.82737989574 40633.561041956535 38621.48556309298 42147.2704431714 1.1123069794112737 0.9126745011452511 1.5102190397930149 1.230109306243483 0.9690706172391638 1.045058511573298 1.09622347767912 0.9640852329154779 0.9163460683691876 1.0 15.363151581402166 -5.761638787776787 24.999996820385714 1.003885933961906 1.1942016624831107 0.2999939996982839 0.14415844974550548 7.508254781124643 941352.6623393424 0.04611716374105539 0.05565225438961505 1.7312556838063454e-06 5.761638787776787 0.1903157285212047 SYT(ph)TPKK ddPTM_KYSE-520_SHP099_60min_R1 2 SYTTPKK 7 1 P62979;J3QTR3 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 1 SYT(0.5)T(0.5)PKK;SYT(0.5)T(0.5)PKK 104.01 0.0050535 3538090000.0 9136400.0 9517300.0 8257500.0 6642400.0 6883800.0 8440900.0 7567600.0 7826300.0 10135300.0 9343300.0 True False 8629585.679038145 9060074.622241447 8789791.66246715 7273691.698889623 7425515.896535765 8388217.212107128 8332606.86065868 7799152.391972143 8294985.0101211285 9260525.630977402 0.9318678035047278 0.9783542515053978 0.9491676836425356 0.7854512787652553 0.8018460498286035 0.9058035738325357 0.8997984771820361 0.8421932731208241 0.8957358729588263 1.0 23.14266265305619 -5.043201406244545 23.11545144141473 0.8683363223338036 0.9572735396344803 0.26618965911368364 0.05791710901779993 216.7145736463701 115955.63283390432 0.015540538548315237 0.026921376018942872 9.053126602434024e-06 5.043201406244545 0.08893721730067661 SYTT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 SYTTPK 6 0 P62979;J3QTR3 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 1 SYT(0.004)T(0.996)PK;SYT(0.135)T(0.864)PK;SYT(0.009)T(0.991)PK 137.06 0.032833999999999995 11825800000.0 31590000.0 31811600.0 24005500.0 23151400.0 24502300.0 30699400.0 26534200.0 26465900.0 30073200.0 32957300.0 True False 29837639.726896267 30283322.985814903 25552932.940158043 25351702.09527777 26430491.61098351 30507793.65723574 29216535.8848366 26374095.97008747 24612664.9636789 32665323.962391414 0.9134346795779297 0.9270786054557738 0.7822647946053716 0.7761044134895451 0.8091299397922318 0.9339504390760152 0.8944205151148812 0.8074034716585934 0.7534798978885443 1.0 24.96125661212809 -5.472201688358571 0.006172109748129036 1.696956367860727 5.305711518508334e-07 0.04934089184614554 0.07762842756946724 60839.14852670209 93.15426016936514 12451.129086977911 13162.68981073351 3.3713070724457325e-06 5.472201688358571 -1.696955837289575 SYVAWDR ddPTM_KYSE-520_SHP099_60min_R1 2 SYVAWDR 7 0 P78527-2;P78527 P78527-2 PRKDC DNA-dependent protein kinase catalytic subunit 0 ; 109.86 0.022777000000000002 1144450000.0 1927860.0 1894380.0 1264110.0 1254070.0 1882440.0 2008570.0 1555740.0 1430790.0 1551960.0 1606270.0 False True 1820917.7627063703 1803371.14127765 1345596.5532475114 1373256.4357501068 2030577.3183815281 1996033.769588788 1713009.3817592289 1425826.923438896 1270163.1857278603 1592039.6974591496 1.1437640440828853 1.1327425717812059 0.8452028899750712 0.8625767548018968 1.275456461055759 1.2537587930592444 1.0759840878924962 0.8955975945288773 0.7978213029204013 1.0 20.602444879209138 -7.266252117006662 6.110641531749237 0.8835664857200874 1.0825871579309199 0.2674914461653375 0.14088101982280932 0.2256846986949042 39.85342727663636 0.08181596655173802 0.04198818376272823 5.416863388886319e-08 7.266252117006662 0.19902067221083242 SYVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 SYVSPR 6 0 Q9BTA9-2;Q9BTA9;A0A0A0MRT2;Q9BTA9-5 Q9BTA9-2 WAC WW domain-containing adapter protein with coiled-coil 1 SYVS(1)PR 75.738 0.0321 358970000.0 630750.0 562920.0 492230.0 444860.0 532650.0 557260.0 460480.0 463360.0 594410.0 463720.0 True False 595761.0401310485 535876.4782398535 523959.933395846 487139.3606479639 574566.5246360687 553781.9336348982 507029.8122517196 461752.71230903745 486480.12785670895 459611.80156870105 1.296226594046664 1.1659328076669344 1.1400053950040412 1.059893064071263 1.2501126443555532 1.20489058754537 1.1031696978214574 1.0046580847859634 1.058458738866808 1.0 18.81005631734261 -7.009910632211575 3.5502542626251783 1.0251847628760307 1.1798910853022735 0.5920082780921399 0.061397080331425845 0.18481089937698778 4.959364757368919 0.03127511390669414 0.018436371873442763 9.774383345298306e-08 7.009910632211575 0.15470632242624283 SYVSS(ph)PDPQLEENLK ddPTM_KYSE-520_SHP099_60min_R1 1 SYVSSPDPQLEENLK 15 0 E9PP00;Q9C0D7;Q9C0D7-2 E9PP00 ZC3H12C Probable ribonuclease ZC3H12C 1 SYVS(0.001)S(0.999)PDPQLEENLK 310.93 5.322999999999999e-37 0.0 546690.0 579830.0 453280.0 360310.0 396830.0 488740.0 429430.0 545070.0 605100.0 496220.0 True False 516364.01590050384 551974.0964574264 482499.15407364303 394553.75406884874 428058.26334615843 485689.59237110225 472840.9752329213 543179.2793902938 495229.0933296797 491823.87685331784 1.049896192930269 1.1223003242318141 0.9810405244264792 0.8022257003730645 0.8703486827131475 0.9875274772720213 0.9614030499254146 1.1044182784812056 1.0069236501858112 1.0 18.907782250407205 -9.29246317212034 12.996939803171223 0.9999999994688541 0.9849269317363444 0.0010780538811513418 0.09216162245774588 0.0 0.0 0.10034826554125596 0.024338029304360433 5.099608400772636e-10 9.29246317212034 -0.015073067732509715 T(ph)AMRVSPHHPAPTPNPR ddPTM_KYSE-520_SHP099_60min_R1 4 TAMRVSPHHPAPTPNPR 17 1 A8MZI9;Q01196-7;Q01196-3;Q01196-4;Q01196;Q01196-9;Q01196-10;Q01196-2;Q01196-8;Q01196-11 A8MZI9 RUNX1 Runt-related transcription factor 1 1 T(0.676)AMRVS(0.324)PHHPAPTPNPR;T(0.59)AMRVS(0.41)PHHPAPTPNPR;T(0.649)AMRVS(0.351)PHHPAPTPNPR;T(0.55)AMRVS(0.45)PHHPAPTPNPR 119.87 0.00019304 11416900000.0 4124280.0 3633220.0 4016190.0 3225880.0 3646120.0 3498660.0 3005120.0 2759480.0 4240570.0 2728450.0 True False 3895497.966851647 3458674.6576255998 4275080.033531206 3532466.6653038156 3933048.900415022 3476823.565177971 3308906.856744887 2749908.0079474724 3470589.38407046 2704278.05570198 1.4404946113577248 1.278964139923767 1.5808581608378562 1.306251277621248 1.454380363040766 1.2856753238991367 1.2235823345783712 1.0168732472421915 1.283370020605947 1.0 21.366812067452553 -6.722179336746276 1.7636356430337627 1.1107839200601637 1.4092948898083595 0.6091714291130297 0.1078725240686177 0.2374175591950657 1.511538491308942 0.05292704121710038 0.033914886708822985 1.895922860725391e-07 6.722179336746276 0.2985109697481958 T(ph)ANSPGSGARPDPVR ddPTM_KYSE-520_SHP099_60min_R1 1 TANSPGSGARPDPVR 15 1 Q13206;E9PIF2;A0A3B3ISR7 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 T(0.603)ANS(0.395)PGS(0.002)GARPDPVR 77.39 0.033832999999999995 530230000.0 405550.0 359940.0 298720.0 277830.0 308490.0 381600.0 317320.0 381540.0 472630.0 335900.0 True False 383053.3330561186 342647.9421190455 317975.969168899 304234.8796673645 332766.4079320024 379218.2928526672 349397.8023447611 380216.52679210546 386812.3060327325 332924.18732624594 1.1505722553007212 1.0292071143009829 0.9551002338478383 0.91382630415264 0.9995260801099773 1.1390529955129267 1.0494815806289617 1.1420513776594905 1.1618630329603519 1.0 18.34483416218149 -6.249618018212901 23.787684172674947 1.1043049935667835 1.0023794105129766 0.2684397913184401 0.07252326652364689 505.1131103665476 1016419.2916726487 0.025038025382755874 0.024812445401948973 5.628361475885801e-07 6.249618018212901 -0.10192558305380683 T(ph)AS(ph)PPPPPK ddPTM_KYSE-520_SHP099_60min_R1 6 TASPPPPPK 9 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 T(1)AS(1)PPPPPK;T(1)AS(1)PPPPPK;T(1)AS(1)PPPPPK;T(1)AS(1)PPPPPK;T(1)AS(1)PPPPPK;T(1)AS(1)PPPPPK 121.36 0.001816 12004480000.0 24224800.0 21226300.0 20030000.0 19605700.0 21038600.0 20827900.0 19521300.0 20723000.0 24322800.0 20125100.0 True False 22881002.053058445 20206556.686674125 21321165.84913314 21469019.83333136 22694218.126740634 20697905.3503828 21494703.513528258 20651116.74978454 19906392.647891454 19946807.271090854 1.1471009742105522 1.0130221048438026 1.0689011809942217 1.0763135945293194 1.1377368727892425 1.0376550527151542 1.0776012031098725 1.0353093840593954 0.9979738800976949 1.0 24.249654508264253 -7.4768462291738125 1.6406254247260756 0.9952402888300353 1.079029046336204 0.42863173650733444 0.037825296348878566 0.38677958680067664 1.8463607812588858 0.03236588581246503 0.010846172780602003 3.3354449009322355e-08 7.4768462291738125 0.08378875750616865 T(ph)AS(ph)PPPPPKR ddPTM_KYSE-520_SHP099_60min_R1 11 TASPPPPPKR 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 T(1)AS(1)PPPPPKR;T(1)AS(1)PPPPPKR;T(1)AS(1)PPPPPKR;T(1)AS(1)PPPPPKR;T(1)AS(1)PPPPPKR;T(1)AS(1)PPPPPKR;T(1)AS(1)PPPPPKR;T(1)AS(1)PPPPPKR;T(1)AS(1)PPPPPKR;T(1)AS(1)PPPPPKR;T(1)AS(1)PPPPPKR 93.839 0.0038961999999999994 49606430000.0 24136960.0 20799800.0 21173190.0 20203070.0 21775170.0 20883500.0 20233690.0 20435870.0 25133460.0 19325520.0 True False 22798034.712963127 19800546.386863705 22538047.705701783 22123163.698525522 23488751.99523061 20753158.330159016 22279108.84698465 20364982.73673794 20569857.22696703 19154310.92782706 1.1902299591389909 1.0337383820003572 1.1766566696460423 1.1549965844182555 1.2262906289730604 1.0834719352920796 1.1631381014400228 1.0632062314051736 1.0739022303894779 1.0 24.1911657902663 -7.72050272433155 1.0503507204207234 1.004567258762571 1.1473328066486106 0.4472676877950972 0.053058941432915105 0.45289150858737437 1.0218458592662907 0.0489433446684126 0.01679351981633725 1.9032562984022165e-08 7.72050272433155 0.14276554788603968 T(ph)ASEINFDKLQFEPPLRK ddPTM_KYSE-520_SHP099_60min_R1 1 TASEINFDKLQFEPPLRK 18 2 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 T(0.623)AS(0.377)EINFDKLQFEPPLRK 54.672 0.044779 4579400000.0 114460.0 106790.0 106190.0 96175.0 120090.0 79617.0 93955.0 90538.0 136240.0 103080.0 True False 108110.67562964685 101659.648104942 113035.17731000723 105315.44308393192 129540.39978136787 79120.08077057348 103452.88831243545 90223.94480972807 111502.25033091319 102166.7913950265 1.0581782412216354 0.9950361239385149 1.1063788513525716 1.0308187391021335 1.2679305869605093 0.774420726052331 1.0125882089458624 0.8831044175683116 1.0913746904294102 1.0 16.640566808919246 -6.263981416301346 24.99119834123302 0.9487598081245071 1.083736735938215 0.309486745377775 0.10368451706203315 291.62287741365316 2866983.7022134177 0.034325772026371 0.031672185855016625 5.44525952907556e-07 6.263981416301346 0.13497692781370796 T(ph)ASELLLDRR ddPTM_KYSE-520_SHP099_60min_R1 2 TASELLLDRR 10 1 Q92508 Q92508 PIEZO1 Piezo-type mechanosensitive ion channel component 1 1 T(0.865)AS(0.135)ELLLDRR;T(0.522)AS(0.478)ELLLDRR 160.16 0.00013796 340430000.0 161668.0 201335.0 166042.0 208609.0 184338.0 184805.0 175148.0 242887.0 321970.0 162837.0 True False 152699.95376283213 191662.5643900038 176745.33299659347 228435.13663941732 198844.35186025305 183651.56344506584 192853.66911975353 242044.48168725191 263508.364203201 161394.39086526886 0.9461292486323468 1.187541669586291 1.0951144711351184 1.4153846079453511 1.2320400405132246 1.1379054901503804 1.1949217571058384 1.4997081397290275 1.632698402902839 1.0 17.300230914195758 -3.122152517281146 0.507962635376187 1.3299793066787267 1.118220550894454e-14 0.2526830147187552 0.17974005240542357 18.33668777872804 1.496565694518658 0.10444922332163499 18.664576378980666 0.0007548270979003614 3.122152517281146 -1.3299793066787156 T(ph)ASESNVYLNSFHYPDHSYK ddPTM_KYSE-520_SHP099_60min_R1 1 TASESNVYLNSFHYPDHSYK 20 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;E9PGF6;A0A1W2PRT1;A0A1W2PRJ2 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(0.389)AS(0.389)ES(0.08)NVYLNS(0.141)FHYPDHSYK 97.346 0.00019998 0.0 80080.0 121330.0 128650.0 243990.0 72345.0 94814.0 104020.0 98109.0 91948.0 115740.0 True False 75637.80276447766 115501.12467995698 136942.98484727787 267178.7362417318 78038.13991325707 94222.23065653253 114535.35673736931 97768.68277781265 75252.56102045505 114714.63364435751 0.6593561811736481 1.0068560654435577 1.1937708424527032 2.3290728284069586 0.6802806009492542 0.8213619105357013 0.9984371923503325 0.8522773396192737 0.655997919618135 1.0 16.807689915829886 T(ph)EAPGYYEVIRFPMDLKT(ph)MS(ph)ERLK ddPTM_KYSE-520_SHP099_60min_R1 1 TEAPGYYEVIRFPMDLKTMSERLK 24 3 Q92831 Q92831 KAT2B Histone acetyltransferase KAT2B 3 T(0.998)EAPGY(0.003)Y(0.003)EVIRFPMDLKT(0.998)MS(0.998)ERLK 46.783 0.06815299999999999 1222100000.0 101680.0 100230.0 95195.0 71971.0 67708.0 107570.0 85823.0 77719.0 158810.0 91995.0 True False 96039.60770594519 95414.80035170284 101331.42201738546 78811.10220112989 73036.23439417806 106898.61572893443 94498.82639176365 77449.41092875093 129974.10727431238 91179.99587102687 1.053296907819476 1.0464444469449863 1.1113339175921622 0.8643464111646523 0.8010116001484254 1.17239110078642 1.036398669346632 0.8494123101113351 1.425467352051204 1.0 16.47642972342147 -7.750307072091908 24.999469854220077 1.212733785746401 0.9945277579615698 0.2625446892397839 0.14803613533237714 253.80515686154058 569970.8068529557 0.10020804706453183 0.03709084057839462 1.7770225048785e-08 7.750307072091908 -0.2182060277848311 T(ph)EFKANAEK ddPTM_KYSE-520_SHP099_60min_R1 1 TEFKANAEK 9 1 P56381 P56381 ATP5E ATP synthase subunit epsilon, mitochondrial 1 T(1)EFKANAEK 61.65 0.047068 0.0 168640.0 192940.0 136890.0 105450.0 175060.0 179720.0 121770.0 143590.0 153670.0 158510.0 True False 159285.2030244946 183670.87279115588 145714.14843174408 115471.9362953014 188836.22604485168 178598.30081625085 134079.6999606753 143091.91980415786 125767.40170545656 157105.72471891405 1.013872685476484 1.1690908979909607 0.9274910172270856 0.7349950901018929 1.2019690968149526 1.136803265035633 0.8534361188974126 0.9108001637761514 0.8005271732171028 1.0 17.261376225871672 -6.783364240456318 24.99693858490869 0.883757496532266 1.0266460366169792 0.2046444173676003 0.13427912013634535 422.1713879258088 481320.76557892223 0.05945173778910396 0.04012089315183252 1.6467806660575428e-07 6.783364240456318 0.1428885400847132 T(ph)EKAEEMNPYHNLESGMANLLK ddPTM_KYSE-520_SHP099_60min_R1 1 TEKAEEMNPYHNLESGMANLLK 22 1 Q8IWG1-2;Q8IWG1 Q8IWG1-2 WDR63 WD repeat-containing protein 63 1 T(0.888)EKAEEMNPY(0.1)HNLES(0.012)GMANLLK 47.751999999999995 0.036785000000000005 36138000.0 86956.0 92477.0 64004.0 61183.0 68216.0 72203.0 66082.0 73939.0 95024.0 79547.0 True False 82132.37733751153 88034.26610919303 68129.80025002078 66997.81392466027 73584.2111040534 71752.35429465707 72762.21345817002 73682.52286649235 77770.03696010493 78842.27546662951 1.0417301739632638 1.1165870795605601 0.8641277772209549 0.8497701712454699 0.9333090739523161 0.9100746251930122 0.9228832251165441 0.9345560161778809 0.986400208515311 1.0 16.266681794148113 -4.757448225447966 24.999980188148747 0.9197841540526224 1.0791586644502351 0.6297620217251345 0.04709425768430193 59.35529968265058 371778.0507694824 0.012261109497306407 0.03002952115878438 1.7480416433262645e-05 4.757448225447966 0.15937451039761275 T(ph)ES(ph)KIRR ddPTM_KYSE-520_SHP099_60min_R1 1 TESKIRR 7 2 Q6P6B7-2;Q6P6B7 Q6P6B7-2 ANKRD16 Ankyrin repeat domain-containing protein 16 2 T(1)ES(1)KIRR 66.682 0.042263999999999996 0.0 170030.0 192180.0 119150.0 85112.0 150390.0 165360.0 105030.0 112550.0 130850.0 134820.0 True False 160598.09695359826 182947.3843319391 126830.59964674037 93201.0188901441 162224.8373979505 164327.9269028226 115647.45739401954 112159.59031936753 107090.93846007038 133625.59968837284 1.2018512719727938 1.3691043090439945 0.949148965037545 0.6974787698427355 1.2140251402147022 1.2297638123686658 0.8654588466859645 0.8393570586843688 0.8014253160308824 1.0 17.02783689696069 -4.770178734334224 24.732793457420563 0.9512877112046597 1.2854777983720604 0.4009151424362075 0.16423062227023927 154.67672677001403 437747.1442813538 0.04646895133807041 0.09919014488630999 1.6975448823648836e-05 4.770178734334224 0.33419008716740073 T(ph)FDWAEFRPIQQALAQER ddPTM_KYSE-520_SHP099_60min_R1 3 TFDWAEFRPIQQALAQER 18 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 T(1)FDWAEFRPIQQALAQER;T(1)FDWAEFRPIQQALAQER;T(1)FDWAEFRPIQQALAQER 106.93 0.00075157 529230000.0 480729.0 430950.0 419669.0 306047.0 401957.0 380073.0 416996.0 554900.0 591290.0 471890.0 True False 454062.004060497 410246.5151308626 446721.53523414145 335133.6148636141 433588.7290775186 377700.82342607924 459150.0251687756 552975.181414633 483926.6412079099 467709.4217248651 0.9708207339205659 0.8771397283764669 0.9551262268497341 0.7165423643331262 0.9270472411662933 0.8075544470178873 0.9816993283468113 1.182304986235506 1.0346737070705938 1.0 18.835252965709874 -6.993487556430011 6.125380437995519 1.0822804643125783 0.8754153090431627 0.5390180936974397 0.08189993030264302 0.10566455582592524 16.3485033859519 0.034850674730102914 0.02218884937078242 1.0151084514278463e-07 6.993487556430011 -0.20686515526941562 T(ph)FSLDAVPPDHSPR ddPTM_KYSE-520_SHP099_60min_R1 12 TFSLDAVPPDHSPR 14 0 Q9BST9;Q9BST9-3;Q9BST9-2 Q9BST9 RTKN Rhotekin 1 T(0.533)FS(0.467)LDAVPPDHSPR;T(0.735)FS(0.265)LDAVPPDHSPR;T(0.5)FS(0.5)LDAVPPDHSPR;T(0.5)FS(0.5)LDAVPPDHSPR;T(0.566)FS(0.434)LDAVPPDHSPR;T(0.595)FS(0.405)LDAVPPDHSPR;T(0.5)FS(0.5)LDAVPPDHSPR;T(0.5)FS(0.5)LDAVPPDHSPR;T(0.5)FS(0.5)LDAVPPDHSPR;T(0.82)FS(0.18)LDAVPPDHSPR;T(0.5)FS(0.5)LDAVPPDHSPR;T(0.5)FS(0.5)LDAVPPDHSPR 153.92 2.059e-06 40947670000.0 5617917.0 5492691.0 5188955.0 5065604.0 5222353.0 5085757.0 4812229.0 5279608.0 6494400.0 5474092.0 True False 5306279.944970112 5228813.879662724 5523443.341921554 5547037.481130625 5633322.469976062 5054014.90409723 5298696.070149141 5261294.272117766 5315180.6705011865 5425595.803659137 0.9780087085350966 0.9637308175696208 1.0180344319413595 1.0223831044305927 1.03828642490781 0.931513346550566 0.9766109127730429 0.969717329213768 0.9796492150993842 1.0 22.371350142971032 -6.257541751347519 24.978081856011283 0.9699250416075026 1.0036377100719729 0.28811511670623136 0.02554967929138153 486.7897128789857 3119615.9597884463 0.009167488802360242 0.008835615215816108 5.526602748254853e-07 6.257541751347519 0.0337126684644703 T(ph)FSLTEVR ddPTM_KYSE-520_SHP099_60min_R1 6 TFSLTEVR 8 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 T(0.592)FS(0.407)LT(0.001)EVR;T(0.559)FS(0.441)LTEVR;T(0.5)FS(0.5)LTEVR;T(0.921)FS(0.079)LTEVR;T(0.999)FS(0.001)LTEVR;T(0.977)FS(0.023)LTEVR 216.42 3.7784e-08 10920160000.0 3370180.0 3401370.0 3494990.0 3428540.0 3494790.0 4064420.0 4262950.0 5066340.0 5459330.0 5019970.0 True False 3183229.3971127346 3237963.0796395424 3720282.647581715 3754387.410771862 3769810.090364945 4039052.4471599506 4693890.5883827 5048766.049032645 4468053.290509867 4975496.971277558 0.6397811948211028 0.6507818411570916 0.7477208144348358 0.754575358490842 0.7576750849467347 0.8117887460240667 0.9434013557800338 1.0147259817819312 0.8980114582127069 1.0 22.24640920396321 -6.291276301103899 0.6369596056666902 0.9997014075217414 0.6504182611134383 0.8924185792712711 0.042280702408949676 0.2480745227076892 0.21928030803129012 0.03543394376796104 0.03712629491565387 5.113564036075391e-07 6.291276301103899 -0.34928314640830316 T(ph)FVSDLLPPTDK ddPTM_KYSE-520_SHP099_60min_R1 1 TFVSDLLPPTDK 12 0 Q7Z4Q2;Q7Z4Q2-3;Q7Z4Q2-2 Q7Z4Q2 HEATR3 HEAT repeat-containing protein 3 1 T(1)FVSDLLPPTDK 184.21 5.3387e-07 33650000.0 69189.0 113940.0 102180.0 105630.0 102630.0 85414.0 116380.0 125340.0 135400.0 132440.0 True False 65350.9482451479 108466.15137257335 108766.68629378047 115669.04344118234 110706.39711517829 84880.89954328538 128144.82615934481 124905.22479457597 110814.7731562363 131266.684636761 0.4978486995842545 0.8263037317710819 0.8285932306034685 0.8811759340251474 0.8433701012676842 0.6466294153628273 0.9762174348650997 0.9515378950890064 0.8441957185319422 1.0 17.002141282456627 -4.205618070370235 2.6635703430814193 0.8646509010046749 0.3922154767549646 0.5826544368821833 0.09406533454513516 0.45116133936354674 3.705333643742643 0.024793596609384856 0.5013897489230998 6.228477926019179e-05 4.205618070370235 -0.4724354242497103 T(ph)GSESS(ph)QTGTSTTSSR ddPTM_KYSE-520_SHP099_60min_R1 1 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 T(0.743)GS(0.257)ES(0.002)S(0.981)QT(0.017)GTSTTSSR 280.31 1.053e-36 3518200000.0 3353400.0 3179600.0 3039800.0 3305400.0 3099500.0 3002600.0 3376200.0 3761800.0 3835600.0 3463000.0 True False 3167380.2171628345 3026847.243323102 3235750.371851964 3619544.2221952495 3343413.016257385 2983859.6596420854 3717499.2445366876 3748751.193810724 3139151.7276075296 3432320.5141732306 0.9228101525144966 0.8818661400717707 0.9427296659768337 1.0545472683127661 0.974096970970888 0.8693417899991285 1.0830862762337772 1.0921914717261523 0.9145858362133995 1.0 21.71075284903158 -5.0230685324265165 6.809451176738813 0.9993696276509884 0.904331013638982 0.25746239893585643 0.06652512993425715 0.2316081775631269 45.12951350200884 0.018611561675663787 0.034423386361122875 9.482688130214946e-06 5.0230685324265165 -0.0950386140120063 T(ph)GSPGDAPERPPLCDFSEGLSAPMDFYR ddPTM_KYSE-520_SHP099_60min_R1 1 TGSPGDAPERPPLCDFSEGLSAPMDFYR 28 1 A0A2R8Y575;Q5VVD7;Q8IWE5 A0A2R8Y575 PLEKHM2 Pleckstrin homology domain-containing family M member 2 1 T(0.5)GS(0.5)PGDAPERPPLCDFSEGLSAPMDFYR 77.31 0.043366 117260000.0 39561.0 31290.0 31279.0 33977.0 42099.0 36736.0 28424.0 34380.0 46898.0 30582.0 True False 37366.47246710169 29786.781432752465 33295.29438816951 37206.16386444246 45411.95178945626 36506.71699747269 31297.37531150727 34260.74380435232 38382.50540237199 30311.067272435954 1.2327666370587262 0.9827031547595733 1.098453383013911 1.22747785586147 1.4981970572429375 1.2044022293689043 1.0325395351541526 1.1303047661244212 1.2662868336964164 1.0 14.887557030798796 -10.595610347453224 2.785913298121249 0.9864017147192728 1.1821609515324663 0.14414472992001215 0.135621244554892 49583304.007844195 48745350.83531261 4945879.053390397 0.03816757325978053 2.5374041892277344e-11 10.595610347453224 0.1957592368131934 T(ph)GSPGSEVVTLQQFLEESNK ddPTM_KYSE-520_SHP099_60min_R1 4 TGSPGSEVVTLQQFLEESNK 20 0 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 T(0.333)GS(0.333)PGS(0.333)EVVTLQQFLEESNK;T(0.331)GS(0.331)PGS(0.331)EVVT(0.006)LQQFLEESNK;T(0.463)GS(0.463)PGS(0.075)EVVTLQQFLEESNK;T(0.393)GS(0.393)PGS(0.215)EVVTLQQFLEESNK 284.38 1.3118000000000001e-43 312897000.0 335805.0 383169.0 279520.0 270337.0 282500.0 382910.0 313032.0 390523.0 406707.0 386709.0 True False 317177.2272393287 364760.9860916056 297538.30644781323 296029.74720021704 304731.142794874 380520.11665674765 344676.3294579137 389168.36686175317 332859.261049139 383283.0591150499 0.8275273839956537 0.9516752108318868 0.7762886967527081 0.7723528086101972 0.7950550788716257 0.9927913786101543 0.8992735819154803 1.015354990539607 0.8684424034228573 1.0 18.548050707715273 -6.2589216215968255 24.985120509257225 0.9526384786213701 0.8260563451400577 0.5167630877636243 0.06311082080252142 197.54287034266878 1960333.2620360681 0.021653332182784788 0.020695350972354414 5.509071112618458e-07 6.2589216215968255 -0.12658213348131242 T(ph)GSTSSKEDDYESDAATIVQK ddPTM_KYSE-520_SHP099_60min_R1 1 TGSTSSKEDDYESDAATIVQK 21 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.486)GS(0.486)T(0.009)S(0.009)S(0.009)KEDDYESDAATIVQK 130.23 7.26e-05 855090000.0 292100.0 321200.0 338680.0 187950.0 258120.0 330410.0 229740.0 242520.0 328710.0 274950.0 True False 275896.6307130861 305769.0698689708 360511.8547071595 205812.711490772 278432.5754980984 328347.78863063373 252964.36124632976 241678.75472459375 269024.5501047739 272514.156907863 1.0124121030760496 1.1220300381398214 1.3229105555387661 0.7552367694437147 1.0217178390194108 1.2048834172737972 0.9282613575626348 0.8868484392401871 0.987194768731707 1.0 18.05597165320803 -5.252063254844801 24.997498084858844 0.9747557810682127 1.1494087887168762 0.30048970142058673 0.12792763022663706 933.1857571854076 2487942.5926388577 0.036109477835999326 0.0614847618758452 5.59676078926271e-06 5.252063254844801 0.17465300764866354 T(ph)HTGERPFACDWQGCDKK ddPTM_KYSE-520_SHP099_60min_R1 1 THTGERPFACDWQGCDKK 18 2 Q9BXK1 Q9BXK1 KLF16 Krueppel-like factor 16 1 T(0.707)HT(0.293)GERPFACDWQGCDKK 75.358 0.008587200000000001 990470000.0 521310.0 471740.0 547640.0 425520.0 414900.0 409000.0 423540.0 437980.0 605480.0 443060.0 True False 492391.8950942795 449076.9023038238 582941.7506549808 465961.29286274646 447550.2695419228 406447.2792891529 466355.5565520611 436460.74960530095 495540.09490870003 439134.8330954637 1.1212772433090914 1.022640128860374 1.3274778193882306 1.0610893460174473 1.0191636732325209 0.9255637418332404 1.061987165228316 0.9939105639347416 1.128446339397937 1.0 18.744304451035003 -5.5087996315556484 24.84157020893024 1.020405844281183 1.1521160748150754 0.3378676438000837 0.08484309998651811 704.9712962248659 1243870.765223383 0.023995601012819685 0.03404142310188482 3.0988486709950486e-06 5.5087996315556484 0.13171023053389241 T(ph)HTGERPNACADCGK ddPTM_KYSE-520_SHP099_60min_R1 3 THTGERPNACADCGK 15 1 Q6DD87 Q6DD87 ZNF787 Zinc finger protein 787 1 T(0.5)HT(0.5)GERPNACADCGK;T(0.5)HT(0.5)GERPNACADCGK;T(0.5)HT(0.5)GERPNACADCGK 92.935 0.0036755000000000004 1405410000.0 1482910.0 1528380.0 1467190.0 1442440.0 1501450.0 1520860.0 1405300.0 1508360.0 1673960.0 1731470.0 True False 1400650.0261922027 1454954.330654849 1561767.414987 1579529.0639145996 1619605.5729181005 1511367.7486056257 1547361.4384063156 1503127.8512138699 1370011.0610975882 1716130.5228632758 0.8161675394335915 0.8478109976316559 0.9100516506059638 0.9204014746379758 0.9437543073448001 0.8806834494639639 0.901657197859649 0.8758820096655457 0.798314022648927 1.0 20.710727852654927 -4.605444342253963 3.653264843550744 0.9004646062619106 0.8213871806550931 0.2649010800665331 0.04878217909006038 0.3057208530790682 7.729855355800949 0.012597155798738092 0.04131294771540734 2.4805938220321973e-05 4.605444342253963 -0.07907742560681752 T(ph)IGGGDDSFNTFFSETGAGK ddPTM_KYSE-520_SHP099_60min_R1 1 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VRZ4;F8VS66;F8VWV9;F8VX09;F8VRK0;F8W0F6;F8VXZ7;P68363;P68363-2;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1A;TUBA1B;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain 1 T(0.719)IGGGDDS(0.236)FNT(0.045)FFSETGAGK 90.654 0.0029124000000000003 62145000.0 140400.0 165020.0 131700.0 142560.0 140910.0 166440.0 140810.0 209310.0 239700.0 210700.0 True False 132611.73211953876 157092.1914999302 140189.59272745054 156108.85953777327 151998.81533177223 165401.18622221673 155044.44897316836 208583.95246332136 196176.52234527186 208833.36192211948 0.6350121977588707 0.7522370470601091 0.6712988357661533 0.7475283551484996 0.727847380000794 0.7920247258381063 0.7424314177874956 0.9988057010790683 0.9393926360215963 1.0 17.671992680764294 -7.239739261666822 6.793071419830867 0.9772513580601649 0.7262478316051086 0.8755355344468757 0.04411393082443891 0.05591439713363504 11.570686762797076 0.021648320051904063 0.011927597274608773 5.7578551920630695e-08 7.239739261666822 -0.2510035264550563 T(ph)IMQVSSGSRGSS(ph)GEATR ddPTM_KYSE-520_SHP099_60min_R1 1 TIMQVSSGSRGSSGEATR 18 1 K7EJ87 K7EJ87 POLR2E 2 T(0.901)IMQVS(0.042)S(0.048)GS(0.009)RGS(0.11)S(0.748)GEAT(0.142)R 60.33 0.042062999999999996 550480000.0 156520.0 154210.0 139820.0 140290.0 137430.0 161900.0 133050.0 142440.0 156770.0 161630.0 True False 147837.52358511568 146801.5201260708 148833.02091990982 153623.11942027332 148244.95913026377 160889.52204624427 146499.99244286664 141945.90888574594 128304.5198500971 160198.08394623734 0.9228420212237377 0.9163750059291443 0.9290561862765996 0.9589572836078951 0.9253853446837413 1.004316144631536 0.9144927881411629 0.8860649602612173 0.8009117006240615 1.0 17.289497366891347 -7.000223839848915 24.99999890824001 0.8861487636918906 0.9424741131268067 0.14312293446530855 0.05085493970004246 12.400279194534507 1384990.4051518496 0.020749267978851824 0.01381715512399837 9.99484722501742e-08 7.000223839848915 0.05632534943491618 T(ph)ISAQDTLAYATALLNEK ddPTM_KYSE-520_SHP099_60min_R1 2 TISAQDTLAYATALLNEK 18 0 Q9UPU5;A0A0U1RQI9 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 T(0.365)IS(0.365)AQDT(0.27)LAYATALLNEK;T(0.499)IS(0.499)AQDT(0.001)LAYATALLNEK 115.87 0.00015313 59334000.0 52478.0 78286.0 55725.0 50096.0 44883.0 65421.0 52338.0 56900.0 76409.0 66694.0 True False 49566.9407277006 74525.02305031831 59317.12266315244 54857.10877808841 48415.036750663094 65012.68327231225 57628.83580965617 56702.62718055985 62535.05171414226 66103.14304714678 0.749842419631211 1.1274051371076985 0.8973419406221829 0.8298714138140549 0.7324165617379497 0.9835036622380152 0.8718017503124402 0.8577901831402753 0.9460223649205357 1.0 16.012431249629298 -9.225495445396131 10.915621904007992 0.9999993349897102 0.8908269691042852 0.08647069992619616 0.10852955535218593 0.0 0.0 0.10380365305528433 0.025176083874818046 5.949829965289082e-10 9.225495445396131 -0.109172365885425 T(ph)KFASDDEHDEHDENGATGPVK ddPTM_KYSE-520_SHP099_60min_R1 7 TKFASDDEHDEHDENGATGPVK 22 1 P05455 P05455 SSB Lupus La protein 1 T(0.83)KFAS(0.17)DDEHDEHDENGATGPVK;T(0.5)KFAS(0.5)DDEHDEHDENGATGPVK;T(0.5)KFAS(0.5)DDEHDEHDENGATGPVK;T(0.5)KFAS(0.5)DDEHDEHDENGATGPVK;T(0.563)KFAS(0.437)DDEHDEHDENGATGPVK;T(0.5)KFAS(0.5)DDEHDEHDENGATGPVK;T(0.601)KFAS(0.399)DDEHDEHDENGATGPVK 289.86 2.7613e-44 32803300000.0 18991290.0 16513770.0 15812890.0 15470230.0 15937250.0 16146660.0 14785810.0 15494780.0 20435950.0 14991990.0 True False 17937805.28550199 15720423.701525886 16832214.190918557 16940516.007905766 17191420.9044517 16045882.705640567 16280503.970399568 15441032.224688832 16725296.628376553 14859172.632191733 1.2071873535300706 1.0579609033862551 1.1327827334378173 1.1400712830541384 1.1569568057381108 1.0798638055309944 1.0956534642533586 1.0391582766349 1.1255873420665392 1.0 23.82485045218329 -13.999999999839515 0.08192456909410613 0.6102781265534895 1.2248838370805357 0.47686816030576507 0.04207320300872368 217.9774732002957 1.2576133080267444 15.050634887846615 1.326738652037455 1.0000000003695302e-14 13.999999999839515 0.6146057105270463 T(ph)KS(ph)DEET(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 1 TKSDEETLK 9 1 P35251-2;P35251;E0CX09 P35251-2 RFC1 Replication factor C subunit 1 3 T(1)KS(1)DEET(1)LK 87.184 0.0069999 948250000.0 1244000.0 1095500.0 884260.0 1014100.0 1126900.0 1081500.0 1007400.0 1223800.0 1334700.0 1090600.0 True False 1174992.8401474818 1042870.5356209755 941260.8144660238 1110479.759099717 1215580.6188160826 1074749.957337944 1109237.8232765403 1219554.923437067 1092352.1250489557 1080938.1324739621 1.0870121099884367 0.9647828162321735 0.8707813945944747 1.0273296183548843 1.1245607702209208 0.9942751810209016 1.026180675796688 1.1282374881584112 1.0105593393665095 1.0 20.043852522066263 -5.508213889552573 24.937769425566422 1.0523647338226032 0.9692185611564301 0.19557641878610532 0.06565331039308278 934.1343279117747 1588506.7678564768 0.01877568656735627 0.026709274827137745 3.1030309724124744e-06 5.508213889552573 -0.08314617266617308 T(ph)KS(ph)RS(ph)PS(ph)PAPEKK ddPTM_KYSE-520_SHP099_60min_R1 1 TKSRSPSPAPEKK 13 3 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 4 T(1)KS(1)RS(1)PS(1)PAPEKK 73.057 0.009702500000000001 730780000.0 879440.0 811070.0 730620.0 928820.0 775630.0 875740.0 717730.0 894840.0 1065300.0 717880.0 True False 830655.7100798244 772104.9797591091 777716.9342333324 1017094.7735400851 836667.6682689845 870274.1818207408 790285.1527697763 891736.0088972263 871868.3740276106 711520.1417021895 1.1674380827682878 1.085148451190687 1.0930357254156973 1.4294672967470197 1.1758875388508345 1.2231195307258058 1.1106996224719023 1.2532828751184772 1.225360074757428 1.0 19.440545071557604 -11.347165140933386 2.0389605297756215 0.0001755371944997919 1.1959105602790738 0.2757038534129812 0.09527430390893847 1699596.2776540832 184980.11773076068 7843088.016732559 0.024500607076662885 4.496088581434474e-12 11.347165140933386 1.195735023084574 T(ph)KS(ph)RSPS(ph)PAPEKK ddPTM_KYSE-520_SHP099_60min_R1 1 TKSRSPSPAPEKK 13 3 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 T(0.915)KS(0.61)RS(0.498)PS(0.977)PAPEKK 54.368 0.060783000000000004 601150000.0 733610.0 723520.0 597160.0 655330.0 650110.0 712070.0 675670.0 661400.0 846630.0 607490.0 True False 692915.1908847212 688761.0131743393 635653.889089783 717612.3661678511 701269.9583800905 707625.7070010449 743973.3175037331 659105.7577719202 692903.3338054967 602108.1112200688 1.1508152406062884 1.1439158522191029 1.0557138780305408 1.1918330824571235 1.1646911000070856 1.1752469262823295 1.2356141756605783 1.0946634756943492 1.1507955479979284 1.0 19.19966302706552 -8.632868949462523 1.2702608841261052 1.0000043493424666 1.15404375879991 0.4867709035036949 0.04673343398897069 3.316629003096254 5.811530778728388 0.04675782021638485 0.013859503489968991 2.3287938768792164e-09 8.632868949462523 0.15403940945744332 T(ph)KSDES(ph)GEEKNGDEDCQR ddPTM_KYSE-520_SHP099_60min_R1 3 TKSDESGEEKNGDEDCQR 18 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBM7;E5RHK4 Q6PKG0 LARP1 La-related protein 1 2 T(0.5)KS(0.5)DES(1)GEEKNGDEDCQR;T(0.751)KS(0.249)DES(1)GEEKNGDEDCQR;T(0.501)KS(0.501)DES(0.998)GEEKNGDEDCQR 152.88 6.282e-06 10991900000.0 7423090.0 6502240.0 6010480.0 6320240.0 6451840.0 5878880.0 6197300.0 6789750.0 8122930.0 6014180.0 True False 7011316.400136958 6189862.630338788 6397925.157908018 6920913.709350552 6959563.102051953 5842187.729260189 6823783.563819452 6766197.94198956 6648010.674401674 5960899.044161232 1.1762179409840234 1.0384109149444207 1.0733154697821727 1.1610519920027274 1.1675358113754541 0.9800849982491615 1.1447574456915899 1.1350968858660888 1.1152697982552608 1.0 22.507098508859837 T(ph)KSDESGEEKNGDEDCQR ddPTM_KYSE-520_SHP099_60min_R1 1 TKSDESGEEKNGDEDCQR 18 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBM7;E5RHK4 Q6PKG0 LARP1 La-related protein 1 1 T(0.563)KS(0.422)DES(0.015)GEEKNGDEDCQR 81.312 0.0040939999999999995 1463000000.0 103170.0 106220.0 102520.0 83725.0 100340.0 94158.0 91126.0 75368.0 125270.0 97192.0 True False 97446.95443570384 101117.03176052961 109128.60323779986 91682.19882716083 108236.18714349609 93570.3249958634 100337.90538405604 75106.56599902338 102524.1257997173 96330.95449423174 1.0115850605584824 1.0496836898526158 1.1328508454085175 0.9517418290779078 1.1235867817543241 0.9713422387137911 1.0415956730716731 0.7796721873395402 1.0642905630698012 1.0 16.555711840333483 -6.79967333310922 2.203521353253254 0.9430494207058264 1.0494409475540114 0.154805649189241 0.08793435856374597 0.4615206531195869 4.577164722549905 0.040973108277761836 0.025916128259101844 1.5860857632057382e-07 6.79967333310922 0.10639152684818498 T(ph)KSHDDGNIDLESDSFLK ddPTM_KYSE-520_SHP099_60min_R1 1 TKSHDDGNIDLESDSFLK 18 1 P18583-10;P18583-4;P18583-7;P18583;P18583-5;P18583-9;P18583-3;P18583-2;P18583-6;P18583-8 P18583-10 SON Protein SON 1 T(0.57)KS(0.43)HDDGNIDLESDSFLK 103.9 0.00020995 0.0 191590.0 138170.0 170410.0 191490.0 138250.0 155600.0 178740.0 177340.0 186630.0 159110.0 True False 180962.12077480395 131532.10580260176 181394.9012656406 209689.1520264323 149129.48846510198 154628.8426831106 196808.78353429533 176724.84893146702 152742.69655944145 157700.40918570684 1.1475057148501389 0.8340631865305468 1.150250035508984 1.3296677739085883 0.94565061203797 0.980522774046964 1.2479915844893894 1.1206365908877074 0.9685624618739751 1.0 17.266826877935078 -4.834145785116601 24.999999944944914 1.101939897712802 0.9907125000511376 0.07694704052176282 0.13868963403060774 91.02314365894645 31295.741867914832 0.036478103283652134 0.07593528876860256 1.4650559645548867e-05 4.834145785116601 -0.11122739766166445 T(ph)KSLIAQDHR ddPTM_KYSE-520_SHP099_60min_R1 1 TKSLIAQDHR 10 1 E9PB39;H0YAN8;O15013-7;O15013-4;O15013-5;O15013-6;O15013 E9PB39 ARHGEF10 Rho guanine nucleotide exchange factor 10 1 T(0.708)KS(0.292)LIAQDHR 106.13 0.0032933999999999997 1130100000.0 1240100.0 1849200.0 2034900.0 2285500.0 2312200.0 1870300.0 2473300.0 2311500.0 2993900.0 2562300.0 True False 1171309.180921938 1760361.656294213 2166072.909955117 2502713.2328393664 2494156.9853816186 1858626.7639474415 2723325.301081861 2303481.9460081565 2450283.230077219 2539600.015439237 0.46121797676842197 0.6931649258120474 0.8529189229747596 0.9854753573887143 0.9821062254759205 0.7318580692424442 1.0723441819679025 0.9070254890551169 0.96483037296463 1.0 21.276169861131567 -4.472699655003937 1.5281922960397034 0.9434617661624948 0.38083354286795124 0.7710555587327431 0.08446475836025186 0.3354680524065846 1.0024928142391778 0.02392262577648406 0.253042279201131 3.367443711415398e-05 4.472699655003937 -0.5626282232945435 down T(ph)KSPKPAES(ph)PQSATK ddPTM_KYSE-520_SHP099_60min_R1 2 TKSPKPAESPQSATK 15 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 2 T(0.5)KS(0.5)PKPAES(0.972)PQS(0.027)AT(0.002)K;T(0.5)KS(0.5)PKPAES(0.998)PQS(0.002)ATK 119.87 0.00050633 1208700000.0 1640680.0 1470460.0 1429150.0 1489020.0 1357520.0 1273220.0 1315540.0 1419830.0 1716070.0 1323280.0 True False 1549668.2097855052 1399816.8943945433 1521275.2957208508 1630536.0131098144 1464349.1007677782 1265273.3617030228 1448527.6216331366 1414904.9411208124 1404474.9466043026 1311556.768696263 1.1815487112509313 1.0672941711749269 1.1599004572505511 1.2432065862697113 1.116496926185968 0.9647110913550104 1.1044337966956839 1.078798093144898 1.0708457156607898 1.0 20.32284882309108 -6.007513199533063 24.964494836718384 1.0511558836858401 1.1589217484891434 0.5122320729014471 0.054856565621027475 325.2660789154792 1080782.7104616647 0.017763391365433076 0.019323825548834356 9.828490007691584e-07 6.007513199533063 0.1077658648033033 T(ph)KSPKPAESPQSATK ddPTM_KYSE-520_SHP099_60min_R1 1 TKSPKPAESPQSATK 15 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 T(0.5)KS(0.5)PKPAESPQSATK 70.26 0.017249 633980000.0 1368200.0 1237300.0 1207000.0 985980.0 1422200.0 1339700.0 1149400.0 1192900.0 1485700.0 1342100.0 True False 1292303.21856092 1177858.2507748376 1284805.1512682827 1079687.2427543045 1534119.04878892 1331338.435363519 1265592.569062991 1188762.108324954 1215934.3314491888 1330210.0381380003 0.9715031322195242 0.8854678712420322 0.9658663778140824 0.8116667381834133 1.1532908373901216 1.0008482850024933 0.951423108214204 0.8936649658643067 0.9140919829106294 1.0 20.343222632385643 -3.9232375377748974 19.24989049835082 0.9518438808173907 1.5621203681076425 0.004019911432550649 0.08623428850684675 721.6547662122559 763268.5551456495 0.02112276413471532 60787.20711604639 0.00011933352301101792 3.9232375377748974 0.6102764872902519 T(ph)KSSDDLLAGMAGGVTVTNGVK ddPTM_KYSE-520_SHP099_60min_R1 5 TKSSDDLLAGMAGGVTVTNGVK 22 1 Q69YQ0-2;Q69YQ0;F8WAN1;C9J8U1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 T(0.333)KS(0.333)S(0.333)DDLLAGMAGGVTVTNGVK;T(0.333)KS(0.333)S(0.333)DDLLAGMAGGVTVTNGVK;T(0.594)KS(0.165)S(0.241)DDLLAGMAGGVTVTNGVK;T(0.59)KS(0.333)S(0.077)DDLLAGMAGGVTVTNGVK;T(0.63)KS(0.29)S(0.081)DDLLAGMAGGVTVTNGVK 308.77 1.1389999999999999e-53 4010800000.0 2954670.0 2843980.0 2538260.0 2161530.0 2068530.0 2263210.0 1909580.0 2376270.0 3265160.0 2607850.0 True False 2790768.565111379 2707350.931898992 2701880.300959592 2366961.1613123105 2231311.5426742677 2249084.466894876 2102618.98210484 2368027.273995589 2672289.2519853525 2584746.4778765957 1.0797068838271648 1.047433841218779 1.045317335408161 0.9157420975602997 0.8632612760178013 0.8701373562727628 0.8134720368522061 0.9161545607138057 1.0338689983168772 1.0 21.30159135158703 -5.255351155350873 4.0399243359796735 0.9031261229231194 1.0596441081331671 0.5203867991906952 0.06158290321079626 0.16595528800555104 6.484426656856252 0.018113748267553558 0.030530564160153095 5.554549541721147e-06 5.255351155350873 0.15651798521004767 T(ph)KSSKEPPSAYKEPPK ddPTM_KYSE-520_SHP099_60min_R1 1 TKSSKEPPSAYKEPPK 16 3 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8YFE7 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 T(0.418)KS(0.291)S(0.291)KEPPSAYKEPPK 113.53 0.00013196 749340000.0 517810.0 367440.0 470730.0 491060.0 490780.0 463450.0 501510.0 562180.0 649980.0 447310.0 True False 489086.0470713563 349787.6308613157 501074.00899462955 537730.1947574276 529401.5938437809 460557.43664195074 552207.5250659309 560229.9287937984 531960.0166624108 443347.18140191416 1.1031671511360706 0.7889700116176389 1.1302068221346904 1.212887365285742 1.1941016342311075 1.0388189120445421 1.245541977553095 1.2636370598371411 1.1998723325144254 1.0 18.758077378001317 -4.926329460156007 8.360016044204512 1.1750019425244673 0.9471009104135191 0.39394882990737334 0.10668417014169566 0.22924100333428798 23.13080287137664 0.026630393932178944 0.05573864512664245 1.1848695531972819e-05 4.926329460156007 -0.22790103211094825 T(ph)KSVSSMSEFESLLDCSPYLAGGDAR ddPTM_KYSE-520_SHP099_60min_R1 6 TKSVSSMSEFESLLDCSPYLAGGDAR 26 1 O94964-2;H0YDM2;O94964-3;O94964;X6R3R3;O94964-4 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 T(0.425)KS(0.425)VS(0.09)S(0.03)MS(0.03)EFESLLDCSPYLAGGDAR;T(0.447)KS(0.288)VS(0.075)S(0.075)MS(0.116)EFESLLDCSPYLAGGDAR;T(0.441)KS(0.292)VS(0.076)S(0.076)MS(0.115)EFESLLDCSPYLAGGDAR;T(0.343)KS(0.343)VS(0.091)S(0.091)MS(0.133)EFESLLDCSPYLAGGDAR;T(0.475)KS(0.455)VS(0.019)S(0.019)MS(0.031)EFESLLDCSPYLAGGDAR;T(0.389)KS(0.389)VS(0.074)S(0.074)MS(0.074)EFESLLDCSPYLAGGDAR 255.0 1.6215e-29 1775865000.0 830988.0 873389.0 687047.0 602228.0 620362.0 723268.0 547925.0 731330.0 941410.0 719407.0 True False 784891.4391064912 831430.0814563835 731335.1489340682 659463.5680535496 669180.9600230561 718753.8161293585 603314.6062326768 728793.1869237057 770473.6750148631 713033.6136701774 1.1007776128062772 1.1660461239362718 1.0256671423520805 0.9248702381071655 0.938498476360182 1.0080223461412114 0.846123653451978 1.0221021463103395 1.0805572980620453 1.0 19.44361056391411 -4.925972233287762 4.45190695527258 0.9699516501207177 1.1315929089423047 0.5078106162087357 0.06166730613664072 0.16114131819307956 6.08295564900784 0.01680197474257192 0.03681892547600759 1.1858445629737847e-05 4.925972233287762 0.16164125882158698 T(ph)LCGTPNYIAPEVLSK ddPTM_KYSE-520_SHP099_60min_R1 1 TLCGTPNYIAPEVLSK 16 0 P53350 P53350 PLK1 Serine/threonine-protein kinase PLK1 1 T(1)LCGTPNYIAPEVLSK 252.38 5.161e-17 0.0 110310.0 173990.0 163300.0 140150.0 129800.0 118290.0 129140.0 155150.0 134240.0 176460.0 True False 104190.88440246679 165631.25923568557 173826.57928923826 153469.81386236614 140014.52153902507 117551.70823255248 142194.731484944 154611.82086228213 109865.39991501594 174896.7016838028 0.5957281263704696 0.9470233437285267 0.9938814032268075 0.8774883253077322 0.8005555290125396 0.6721207838731871 0.8130212297657794 0.8840179338647914 0.6281730807802339 1.0 17.416143556667848 -4.244478634146869 23.949520846630627 0.8403103118229562 0.5957277762739542 0.28723635749740073 0.11805938285473234 2722.036017812911 3843559.320062853 0.03031091313181391 0.7976871685181032 5.695362427394923e-05 4.244478634146869 -0.244582535549002 T(ph)LDAEVVEKPAK ddPTM_KYSE-520_SHP099_60min_R1 4 TLDAEVVEKPAK 12 1 H0Y3X6;A0A0C4DFX9;Q9H3P2;H7C2C7;Q9H3P2-7 H0Y3X6 NELFA Negative elongation factor A 1 T(1)LDAEVVEKPAK;T(1)LDAEVVEKPAK;T(1)LDAEVVEKPAK;T(1)LDAEVVEKPAK 150.59 4.8822e-05 2233210000.0 885872.0 770950.0 833104.0 1168330.0 1104330.0 1782060.0 2146900.0 2928630.0 2643370.0 2350810.0 True False 836730.9142179508 733912.404780457 886807.2168535291 1279367.7319287758 1191234.488221815 1770937.502518405 2363929.60372484 2918471.266077379 2163400.6419350086 2329983.6523025064 0.35911449996273037 0.31498607471138246 0.3806066261354151 0.5490887159935631 0.5112630241180571 0.7600643467040432 1.0145691800836405 1.252571563407033 0.928504644140795 1.0 21.15188840196131 -6.390309319872995 1.2944845371184304 1.090990518129288 0.37758825953474395 0.9073000321751795 0.0950432185153332 0.12011408225654162 0.40906580464577336 0.04964937607348933 0.04006163066028779 4.0709023048135264e-07 6.390309319872995 -0.7134022585945441 down T(ph)LDAEVVEKPAKEETVVENATPDYAAGLVSTQK ddPTM_KYSE-520_SHP099_60min_R1 1 TLDAEVVEKPAKEETVVENATPDYAAGLVSTQK 33 2 H0Y3X6;A0A0C4DFX9;Q9H3P2;H7C2C7;Q9H3P2-7 H0Y3X6 NELFA Negative elongation factor A 1 T(1)LDAEVVEKPAKEETVVENATPDYAAGLVSTQK 240.13 3.4593000000000003e-31 1531300000.0 522960.0 594940.0 605450.0 687650.0 704610.0 1036200.0 1173500.0 1713000.0 2077000.0 1360800.0 True False 493950.36630508635 566358.1893768533 644478.2757542512 753004.0492504888 760058.7983175073 1029732.6914411266 1292128.8322563237 1707058.0028172042 1699869.1569091796 1348744.3706863811 0.3662297890101392 0.4199151460321806 0.477835748390389 0.5583000497472195 0.5635306547605536 0.7634750615619561 0.958023521980488 1.2656645988064261 1.2603345703264064 1.0 20.363185507610375 -6.616186872470183 1.2068890089241613 1.2070233009187323 0.44794967472416525 0.9244540622384301 0.08831221371920232 0.11398086659432063 0.33795535031572155 0.05437281145383908 0.035543192549991824 2.419987526812446e-07 6.616186872470183 -0.7590736261945671 down T(ph)LDRS(ph)GDLGDMEPLKGTTPLMQK ddPTM_KYSE-520_SHP099_60min_R1 1 TLDRSGDLGDMEPLKGTTPLMQK 23 2 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-8;O60716-7;A0A669KB62;O60716-23;O60716-15;O60716-16;O60716-24;O60716-27;O60716-29;O60716-31;O60716-32 O60716-5 CTNND1 Catenin delta-1 2 T(1)LDRS(1)GDLGDMEPLKGTTPLMQK 177.55 2.7072e-10 260490000.0 157240.0 120620.0 111400.0 90118.0 115030.0 109240.0 101220.0 112370.0 129700.0 114520.0 True False 148517.58374983122 114825.23414568885 118581.02224630212 98682.78762503537 124082.20656882938 108558.19263947953 111452.30541200272 111980.21469735516 106149.74947092934 113505.4418952119 1.3084622311496086 1.0116275680570046 1.0447166256202587 0.869410188421972 1.093182886186038 0.9564139906146556 0.9819115590501412 0.9865625191850728 0.9351952443736281 1.0 16.79240194205898 -4.060379065665617 1.9468865284380512 0.9808137560947793 1.5616205100995317 0.7421719636995181 0.05702225553433105 0.7421070111696699 1.8637082482290357 0.014336874259198478 0.9263444089312439 8.702037176459231e-05 4.060379065665617 0.5808067540047525 T(ph)LKERQR ddPTM_KYSE-520_SHP099_60min_R1 1 TLKERQR 7 2 Q5R3C7;O95561 Q5R3C7 C1orf105 Uncharacterized protein C1orf105 1 T(1)LKERQR 49.358000000000004 0.064 140060000.0 105850.0 81315.0 71543.0 37313.0 103760.0 100370.0 78118.0 91402.0 92765.0 71221.0 True False 99978.28949325645 77408.50534369658 76154.77625284732 40859.21630143749 111925.32168635781 99743.55359963895 86014.9297982101 91084.94779538723 75921.21441534907 70590.03734909956 1.4163229436870637 1.0965924973360848 1.0788317886308465 0.5788241207377501 1.5855682457403535 1.4129976034204674 1.2185137312341612 1.2903371526059846 1.0755230804013383 1.0 16.10717696416114 -5.792784925149765 24.999974423117635 1.2835331202162206 1.0490796666946278 0.16185221290330765 0.2439407361137519 358.8614551245616 286211.9276566831 0.0769756379779654 0.08729044831892786 1.6114434697656335e-06 5.792784925149765 -0.23445345352159275 T(ph)LNAETPKSS(ph)PLPAK ddPTM_KYSE-520_SHP099_60min_R1 1 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 2 T(0.54)LNAET(0.461)PKS(0.51)S(0.489)PLPAK 58.751999999999995 0.049781 685620000.0 3165400.0 2714700.0 2654800.0 2224100.0 2601500.0 2600300.0 2466000.0 2707900.0 3214500.0 2600200.0 True False 2989808.951931543 2584281.7371522267 2825932.655830183 2435477.795299949 2806223.2494897805 2584070.563167689 2715287.3458407302 2698506.926928609 2630827.830950673 2577164.2509249863 1.1601157942721159 1.0027617511086793 1.0965279589051842 0.9450223416787721 1.0888802483126876 1.0026798106640753 1.0535949910317781 1.04708379605998 1.0208227240488945 1.0 21.297353057023663 -4.253469690590932 24.698857336630248 1.0314346875740417 1.1601158690678741 0.4559371917007149 0.042999917221950575 737.0345664630615 2284079.7987470482 0.009691755316532836 0.10498449945318948 5.578665342844482e-05 4.253469690590932 0.12868118149383245 T(ph)LRSSLEGPTILDIEK ddPTM_KYSE-520_SHP099_60min_R1 2 TLRSSLEGPTILDIEK 16 1 Q7L576;Q7L576-2;A0A0G2JR96;A0A0G2JQT1 Q7L576 CYFIP1 Cytoplasmic FMR1-interacting protein 1 1 T(0.415)LRS(0.292)S(0.292)LEGPTILDIEK;T(0.423)LRS(0.288)S(0.288)LEGPTILDIEK 123.53 0.00031262 269140000.0 349910.0 410200.0 305380.0 265130.0 296040.0 365180.0 263320.0 327130.0 396190.0 336240.0 True False 330499.7947717085 390493.37627724744 325065.28342527617 290327.87548575905 319336.6637628122 362900.77616335655 289938.95535554766 325995.2623827158 324251.8831371437 333261.1751907612 0.9917140650498154 1.1717337792310372 0.9754070009481492 0.8711722129635208 0.9582174208562443 1.0889380557325028 0.8700051999444112 0.9781975419012241 0.9729662717282908 1.0 18.3462937282116 -4.905176766873011 9.085424074097476 0.9600560564662485 1.081152489273436 0.30278511141054953 0.07136307234456196 0.3079942387397194 26.64880746916541 0.018215057302250717 0.038069276928997475 1.2440081715527287e-05 4.905176766873011 0.12109643280718763 T(ph)LSDPPS(ph)PLPHGPPNK ddPTM_KYSE-520_SHP099_60min_R1 1 TLSDPPSPLPHGPPNK 16 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2 H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 2 T(0.75)LS(0.25)DPPS(1)PLPHGPPNK 71.376 0.022441 213380000.0 541530.0 511250.0 461550.0 489370.0 511710.0 564750.0 575180.0 627270.0 738580.0 635370.0 True False 511490.2513867083 486688.7825981055 491302.2515061102 535879.5776655448 551978.6657683707 561225.1857666242 633324.8076158436 625094.1467759192 604472.4900866543 629741.1161103802 0.8122230521423585 0.772839457591966 0.7801654345529432 0.8509521832962493 0.8765167965809313 0.891199846109863 1.0056907376917015 0.9926208258988025 0.9598745811933029 1.0 19.26439933913924 -6.160314541151411 0.9379787111648235 0.9946268651409718 0.7848926768528213 0.918033067602363 0.02467293127934625 0.14592770084683868 0.27672069537796495 0.01453699684130612 0.014801964508968889 6.913300883711636e-07 6.160314541151411 -0.2097341882881505 T(ph)LSKEEETKK ddPTM_KYSE-520_SHP099_60min_R1 1 TLSKEEETKK 10 2 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 1 T(0.63)LS(0.37)KEEETKK 126.71 0.00095788 10555000000.0 3574000.0 3092400.0 2918100.0 3131900.0 2878900.0 3120200.0 3031000.0 3334100.0 3978000.0 2960500.0 True False 3375743.095407635 2943836.4622129705 3106205.3951250785 3429554.834359932 3105453.051299687 3100725.6744205747 3337403.05970935 3322534.7852847916 3255695.4772194084 2934272.273234148 1.1504532575932018 1.0032594756342366 1.0585948084842944 1.168792298398364 1.0583384097062212 1.056727319650866 1.1373869733059476 1.1323198653350262 1.1095410289349148 1.0 21.484571315256975 -6.750733237170873 24.99573903215263 1.1058386280045003 1.0807946288865378 0.0 0.05752916120952435 818.7584354546148 1911568.2669942828 0.02179687497767783 0.01671576014339939 1.775279601101102e-07 6.750733237170873 -0.025043999117962512 T(ph)LSPGRR ddPTM_KYSE-520_SHP099_60min_R1 2 TLSPGRR 7 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 T(0.996)LS(0.004)PGRR;T(0.993)LS(0.007)PGRR 66.62100000000001 0.03859 25909000000.0 15848900.0 14023000.0 14003800.0 12163900.0 13316200.0 12320900.0 12027700.0 13006700.0 14965700.0 12327500.0 True False 14969729.923001146 13349314.031047858 14906507.354872221 13319953.398790108 14364109.181186179 12244000.692894204 13243577.295039965 12961582.793486608 12248306.134595906 12218287.940649882 1.2251904682322388 1.0925682956476321 1.220016047033784 1.0901652885814728 1.1756237249408088 1.002104448051087 1.0839143224787635 1.0608346158191122 1.0024568248916572 1.0 23.542538809222833 -6.178478448246929 0.4731069703245099 1.0002307560426904 1.1976890953137502 0.6040120441401835 0.05136069983288745 0.8151987061417267 0.381573135325941 0.0452192983186071 0.06834881255247474 6.630122486683137e-07 6.178478448246929 0.19745833927105982 T(ph)LTLISKT(ph)VQT(ph)LGSLSKSKS(ph)ASFK ddPTM_KYSE-520_SHP099_60min_R1 1 TLTLISKTVQTLGSLSKSKSASFK 24 3 Q14644-2;Q14644 Q14644-2 RASA3 Ras GTPase-activating protein 3 4 T(0.762)LT(0.136)LIS(0.117)KT(0.407)VQT(0.407)LGS(0.407)LS(0.407)KS(0.407)KS(0.475)AS(0.475)FK 47.391999999999996 0.06387799999999999 412330000.0 213010.0 201990.0 157660.0 286480.0 182030.0 158010.0 195420.0 248550.0 177920.0 127810.0 True False 201193.91067509222 192286.097206829 167823.0158649193 313706.9730666476 196354.72539097644 157023.80097916635 215174.96071540748 247687.8380620059 145614.2129982095 126677.70283467523 1.5882345998779812 1.5179158834114483 1.324803119329864 2.476418233412875 1.55003383387237 1.239553587296221 1.6986016946978302 1.9552599433008253 1.1494857401088805 1.0 16.950803085413572 -5.985059720571198 24.999115819612314 1.4762304685899044 1.7244552639684643 0.12201467410870459 0.3814284273588924 657.6780005703814 1100466.4794775792 0.12040335238307227 0.13647882427110192 1.034999832309927e-06 5.985059720571198 0.2482247953785599 T(ph)LTPPLRR ddPTM_KYSE-520_SHP099_60min_R1 4 TLTPPLRR 8 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.851)LT(0.149)PPLRR;T(0.992)LT(0.008)PPLRR;T(0.857)LT(0.143)PPLRR;T(0.511)LT(0.489)PPLRR 87.806 0.008548 12727200000.0 2411890.0 2345840.0 2091130.0 1688690.0 1890700.0 2217420.0 1859440.0 2085930.0 2607620.0 2188190.0 True False 2278097.653716485 2233142.325222376 2225927.5857263007 1849182.5898768369 2039487.3333885607 2203580.2592698145 2047410.3415855996 2078694.395689721 2134141.940750847 2168804.338986061 1.050393349351892 1.0296651869787357 1.026338589292451 0.8526276698345916 0.940374056214791 1.0160346047168145 0.9440272249468044 0.9584517876156281 0.9840177384321266 1.0 21.048468473921645 -5.033140453664742 24.920454357492368 0.9547866531012166 1.037022483907669 0.42740657726039555 0.04201940485273934 550.4615609100927 413927.19999835396 0.011659426270237163 0.020215098102665113 9.265301290406217e-06 5.033140453664742 0.08223583080645236 T(ph)LYDFPGNDAEDLPFK ddPTM_KYSE-520_SHP099_60min_R1 1 TLYDFPGNDAEDLPFK 16 0 P46109 P46109 CRKL Crk-like protein 1 T(0.593)LY(0.407)DFPGNDAEDLPFK 140.39 7.848e-05 26173000.0 42093.0 43334.0 31139.0 27272.0 37917.0 42937.0 36538.0 36651.0 48274.0 44087.0 True False 39758.01737968483 41252.16959433994 33146.2697641616 29863.92268037423 40900.85218178135 42669.01425632855 40231.617616516065 36523.866235407695 39508.658488509216 43696.42347916696 0.9098689140689094 0.9440628387814769 0.7585579579519746 0.6834408929282824 0.9360228807120005 0.9764875671500153 0.9207073351368722 0.8358548212262977 0.9041622939082341 1.0 15.41522758055615 T(ph)MIISPERLDPFADGGK ddPTM_KYSE-520_SHP099_60min_R1 1 TMIISPERLDPFADGGK 17 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.563)MIIS(0.437)PERLDPFADGGK 71.545 0.041168 146670000.0 457480.0 538830.0 418360.0 359990.0 452480.0 560890.0 409180.0 444490.0 596940.0 512240.0 True False 432102.6724362302 512943.79799968115 445328.15499966766 394203.3413650603 488087.601740972 557389.2774584192 450543.90761196695 442948.1679347455 488550.7436328186 507701.95211669 0.8510951565869022 1.0103246518181328 0.8771448546593605 0.7764463770949944 0.9613664074090268 1.0978671150161525 0.8874181116176093 0.8724570904012173 0.9622786392606391 1.0 18.95362228168507 -5.9025592144395 23.275020029385825 0.9601334485112196 0.8856420641813414 0.2144545891979841 0.07891576121274069 16.64170334470004 3954.7444488482397 0.026060397348806615 0.02954971550820114 1.251528620119265e-06 5.9025592144395 -0.07449138432987823 T(ph)MIISPERLDPFADGGKT(ph)PDPK ddPTM_KYSE-520_SHP099_60min_R1 1 TMIISPERLDPFADGGKTPDPK 22 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 T(0.794)MIIS(0.206)PERLDPFADGGKT(1)PDPK 86.304 0.0021013 294720000.0 278310.0 265230.0 261560.0 257760.0 253110.0 254300.0 216660.0 230640.0 310260.0 244510.0 True False 262871.5895027698 252487.9526816538 278420.5761107971 282257.4329016303 273028.31700109906 252712.8193722045 238562.10719783173 229839.96367178074 253924.60501812334 242343.8316259012 1.0847050974606884 1.0418583835523894 1.1488659490231488 1.1646982347681227 1.1266154998430684 1.0427862664245964 0.9843952107107591 0.948404430720472 1.0477865407777287 1.0 17.886695836512093 -6.478180266186851 3.266129737775309 0.9916460410436048 1.1138110824471223 0.670590256114561 0.03911294678742627 0.16092323946523426 3.458497862320379 0.016634373411377707 0.013677560729490912 3.325215022068784e-07 6.478180266186851 0.12216504140351758 T(ph)MT(ph)DILSRGPK ddPTM_KYSE-520_SHP099_60min_R1 1 TMTDILSRGPK 11 1 D6RC56;D6RFY7;Q8N5Z0 D6RC56 AADAT Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial 2 T(0.667)MT(0.667)DILS(0.667)RGPK 47.823 0.041306999999999996 0.0 57659.0 65127.0 60810.0 47873.0 60327.0 79373.0 58839.0 66773.0 87296.0 81248.0 True False 54460.540329633135 61998.20116237998 64729.909899440136 52422.835526457726 65074.39168632336 78877.60366508065 64787.020333301996 66541.38004793544 71445.24695307833 80528.20592998741 0.6762914894314429 0.7698942308025869 0.8038166149599486 0.6509872524918168 0.8080943929497217 0.9795028059318517 0.8045258128515732 0.8263114678822927 0.8872077320981674 1.0 16.297206571819768 -6.000287545265235 24.996379102923957 0.8839487786467025 0.733485059527637 0.5766264297219255 0.06970530398901179 8.499114568971757 738945.5747303668 0.021419389065521977 0.024028545545101584 9.993381216968538e-07 6.000287545265235 -0.15046371911906553 T(ph)NKSPEAKPLPGKLPK ddPTM_KYSE-520_SHP099_60min_R1 2 TNKSPEAKPLPGKLPK 16 3 P46087-2;P46087;P46087-4;P46087-3;F5H359;F5GWB7;F5H709;F5H5X6 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 T(0.91)NKS(0.09)PEAKPLPGKLPK;T(0.568)NKS(0.432)PEAKPLPGKLPK 72.421 0.012272 8060000000.0 9535400.0 8878000.0 8703200.0 7658000.0 6809200.0 7262100.0 7385600.0 7486900.0 8709700.0 7009000.0 True False 9006452.353651363 8451487.553850321 9264222.197612349 8385814.017538346 7345045.300951701 7216774.540160779 8132208.524509853 7460929.691355593 7128238.033669646 6946905.712919492 1.2964696407066003 1.216583023162771 1.333575347133794 1.2071293845176059 1.0573117880802338 1.0388473427441802 1.1706231321645832 1.0739932280180722 1.026102602834082 1.0 22.727939085767527 -5.629187281119528 3.7681418364879553 1.0691757898960046 1.2754690566057416 0.7975811383376024 0.05074603680896758 0.10376453945068868 2.7972953696517413 0.015492798221327046 0.020464197925956717 2.3486198054466557e-06 5.629187281119528 0.20629326670973702 T(ph)NRTSQDYDQLPSCSDGSQAPARPPKPR ddPTM_KYSE-520_SHP099_60min_R1 4 TNRTSQDYDQLPSCSDGSQAPARPPKPR 28 3 Q13191 Q13191 CBLB E3 ubiquitin-protein ligase CBL-B 1 T(0.333)NRT(0.333)S(0.333)QDY(0.001)DQLPSCSDGSQAPARPPKPR;T(0.333)NRT(0.333)S(0.333)QDYDQLPSCSDGSQAPARPPKPR;T(0.493)NRT(0.254)S(0.254)QDYDQLPSCSDGSQAPARPPKPR;T(0.408)NRT(0.296)S(0.296)QDYDQLPSCSDGSQAPARPPKPR 148.75 7.445999999999999e-07 12909010000.0 1805438.0 1758831.0 1542389.0 1570218.0 1558574.0 1473372.0 1708347.0 1809005.0 2071847.0 1617824.0 True False 1705286.7550885743 1674334.1187008463 1641813.8628496553 1719451.0466167436 1681224.9067269983 1464176.1388284054 1881043.386620023 1802729.983879942 1695651.8118126213 1603491.3380080264 1.0634836089648014 1.0441803326364245 1.0238994274139555 1.0723170159140185 1.0484776979310273 0.913117585435361 1.173092327992736 1.1242530228566276 1.0574748809800765 1.0 20.612785129747564 -6.788246482284688 24.999994373197907 1.099059395986013 1.0311499221983893 0.19536100849538107 0.05903569007296075 337.63063583230985 314867.26501936134 0.02436816417162294 0.01643389373614703 1.6283715938415868e-07 6.788246482284688 -0.0679094737876238 T(ph)PAPEPEPCEASELPAKR ddPTM_KYSE-520_SHP099_60min_R1 1 TPAPEPEPCEASELPAKR 18 1 H0Y5D5;A0A494C0L7;Q9BTG3;Q5SYW2;F5H2X7;Q9ULV3-5;Q9ULV3-3;Q9ULV3-4;Q9ULV3-2;Q9ULV3 H0Y5D5 CIZ1 Cip1-interacting zinc finger protein 1 T(1)PAPEPEPCEASELPAKR 90.96799999999999 0.0023466999999999997 384780000.0 391970.0 251540.0 238190.0 259410.0 284880.0 308160.0 295030.0 311350.0 345590.0 307660.0 True False 370226.6427271771 239455.64083076277 253544.10851747493 284064.2484055399 307298.43525452615 306236.65913385176 324854.5116153245 310269.99951963645 282839.56761494617 304934.3717558579 1.2141190925619718 0.7852694317532696 0.8314710705045478 0.9315586392240904 1.0077526960475318 1.0042707136309204 1.0653259904574333 1.0174976265648743 0.9275424281831972 1.0 18.218139252422638 -5.737797650792338 5.511759966580857 1.007969468901829 0.9208255045724677 0.061148806163396796 0.11060977111538343 0.39980177350655716 34.42533330155489 0.03324341414730358 0.04163915639783902 1.8289521745155484e-06 5.737797650792338 -0.08714396432936133 T(ph)PAS(ph)INATPANINLADLTR ddPTM_KYSE-520_SHP099_60min_R1 2 TPASINATPANINLADLTR 19 0 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 2 T(1)PAS(1)INATPANINLADLTR;T(1)PAS(1)INATPANINLADLTR 145.88 4.8553e-06 144320000.0 136767.0 99510.0 108159.0 104676.0 113975.0 135339.0 92934.0 109394.0 142416.0 123380.0 True False 129180.26187174473 94729.39023244474 115131.10220051883 114624.37556801316 122944.18407095833 134494.29909954703 102328.6756684356 109014.53774675142 116556.84441520351 122286.94918818763 1.0563699783935976 0.7746484057482331 0.9414831506127718 0.9373393999029077 1.0053745300470232 1.0998254514680343 0.8367914675094379 0.8914650211690924 0.9531421397702379 1.0 16.89991091799015 -4.9834952516045545 24.999115658916548 0.9570805274469562 0.9011483724260314 0.031586358876460996 0.09155685080493359 764.6165347144926 1158121.0534112474 0.024079413673654917 0.05010405680033846 1.0387349594570585e-05 4.9834952516045545 -0.055932155020924745 T(ph)PAVEGLTEAEEEELRAELTK ddPTM_KYSE-520_SHP099_60min_R1 1 TPAVEGLTEAEEEELRAELTK 21 1 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;A0A087WZ51;A0A087WYR3;O43399-6 O43399 TPD52L2 Tumor protein D54 1 T(1)PAVEGLTEAEEEELRAELTK 106.86 0.001198 40762000.0 95834.0 79239.0 58185.0 59394.0 56235.0 64434.0 62347.0 79381.0 92677.0 66653.0 True False 90517.89697965737 75432.23949983626 61935.69819929162 65038.78790254279 60660.374566618484 64031.84350542127 68649.64320808284 79105.64583866473 75849.19299704955 66062.50627524928 1.3701856330202604 1.1418313314597544 0.9375317663734505 0.9845037914783135 0.9182269639283314 0.9692614936319967 1.0391619555282123 1.1974363417135772 1.1481428312910815 1.0 16.011544083085763 -4.369504540756542 3.0609413483904704 1.0249460918179485 1.3881371349839775 0.6090744441389102 0.08423481551696603 0.2252492103653004 3.365813023058386 0.02480035786844901 0.16970990579463702 4.2706645423334746e-05 4.369504540756542 0.363191043166029 T(ph)PCEEILVK ddPTM_KYSE-520_SHP099_60min_R1 6 TPCEEILVK 9 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 T(1)PCEEILVK;T(1)PCEEILVK;T(1)PCEEILVK;T(1)PCEEILVK;T(1)PCEEILVK;T(1)PCEEILVK 138.23 0.002109 4829000000.0 3610090.0 3207320.0 2613790.0 2770170.0 3001370.0 3261360.0 2894200.0 3363520.0 3609790.0 3393740.0 True False 3409831.1111640064 3053235.5329145333 2782279.0856118663 3033446.1239180192 3237560.7435407084 3241004.64249993 3186773.980670006 3351852.734171468 2954343.1314006634 3363674.103889767 1.0137221995498502 0.9077084873899521 0.8271547717403499 0.9018252155909305 0.9625072594865178 0.9635311098515812 0.9474086615539855 0.9964855781644752 0.8783083735681315 1.0 21.681606503372063 -5.761050850797431 24.99989813900802 0.9576074192553442 0.9061496561509874 0.14784399889590594 0.052529296226041015 18.86174113197492 1213579.5340932559 0.01610575260636464 0.019536034306846906 1.7336010014965605e-06 5.761050850797431 -0.05145776310435679 T(ph)PDGNKS(ph)PAPKPSDLRPGDVSSK ddPTM_KYSE-520_SHP099_60min_R1 2 TPDGNKSPAPKPSDLRPGDVSSK 23 3 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 2 T(1)PDGNKS(1)PAPKPSDLRPGDVSSK;T(1)PDGNKS(0.997)PAPKPS(0.003)DLRPGDVSSK 128.3 0.00016384 1499830000.0 1920350.0 1473400.0 1433580.0 1600740.0 1531020.0 1496760.0 1422780.0 1570270.0 1681080.0 1542910.0 True False 1813824.3573771815 1402615.6523815128 1525990.8606091014 1752873.848319969 1651502.563687816 1487418.1656450669 1566608.4873946765 1564823.0998737742 1375838.248578182 1529241.0177658142 1.1860944980583485 0.9171972475801766 0.9978746599659868 1.146237792444828 1.0799491672677097 0.9726512357209398 1.0244353043076593 1.0232678052017887 0.8996869902092018 1.0 20.544384371531752 -7.615250570428827 6.703329909094476 0.9507627509068889 1.0405766385943251 0.18949611264642285 0.07801747450435596 0.3766744320247872 22.724806770046094 0.05369928446455074 0.01980915708337882 2.4252104425774347e-08 7.615250570428827 0.08981388768743626 T(ph)PDLPEEEYVKEEIQENEEAVKK ddPTM_KYSE-520_SHP099_60min_R1 3 TPDLPEEEYVKEEIQENEEAVKK 23 2 Q9NYB0;A0A590UJT3 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 T(1)PDLPEEEYVKEEIQENEEAVKK;T(1)PDLPEEEYVKEEIQENEEAVKK;T(1)PDLPEEEYVKEEIQENEEAVKK 240.46 2.0965e-28 457365000.0 595680.0 534751.0 480276.0 559095.0 516816.0 523950.0 503256.0 522147.0 680120.0 499114.0 True False 562636.4429413596 509060.7592823845 511235.35942876944 612231.220701959 557486.4789192046 520679.8337006163 554130.0277852485 520335.79392702546 556627.352429981 494692.2382648166 1.137346413428406 1.0290453738832996 1.0334412385809397 1.2376002155389023 1.126935973110565 1.0525328546228134 1.1201510452820445 1.051837392379869 1.1251992842709806 1.0 18.916171738185007 -9.844327946140373 8.027742657994661 1.0000000029965306 1.0998180398763362 0.2039126439432284 0.06011489749731752 9.027092249394253e-11 0.0 0.059636732447213237 0.014464032179209425 1.4311068281925935e-10 9.844327946140373 0.09981803687980562 T(ph)PDSTFSETFK ddPTM_KYSE-520_SHP099_60min_R1 3 TPDSTFSETFK 11 0 B7Z1S6;Q9NZI5-3;Q9NZI5 B7Z1S6 GRHL1 Grainyhead-like protein 1 homolog 1 T(0.99)PDS(0.008)T(0.002)FSETFK;T(0.988)PDS(0.01)T(0.003)FSETFK;T(0.839)PDS(0.132)T(0.018)FS(0.01)ETFK 146.5 0.00033422 455540000.0 700660.0 521530.0 415490.0 410922.0 442950.0 456320.0 438580.0 471630.0 694650.0 454100.0 True False 661792.9930689188 496474.91596751055 442273.15020750486 449975.90333179594 477807.6449592539 453471.9376166906 482915.94652831624 469994.02560926933 568519.0707014739 450077.02728445444 1.4703994048793279 1.1030887734106278 0.9826610188837356 0.9997753185643163 1.0616130484199837 1.0075429540421545 1.0729628869129266 1.0442524215132338 1.2631594954571244 1.0 18.779812403371324 -4.270207375688239 3.8981907295645 1.0523048922512932 1.5068504969353866 0.727916746034359 0.07585835338858554 0.11819084289144936 3.650902901337662 0.018988447148335655 0.15129573316256698 5.367754248106588e-05 4.270207375688239 0.45454560468409344 T(ph)PDTSTYCYETAEK ddPTM_KYSE-520_SHP099_60min_R1 7 TPDTSTYCYETAEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.997)PDT(0.003)STYCYETAEK;T(0.999)PDT(0.001)STYCYETAEK;T(0.974)PDT(0.026)STYCYETAEK;T(0.996)PDT(0.003)S(0.001)TYCYETAEK;T(1)PDTSTYCYETAEK;T(0.787)PDT(0.213)STYCYETAEK;T(0.822)PDT(0.163)S(0.014)T(0.001)YCYETAEK 307.43 1.1063e-41 4057970000.0 2666550.0 3962030.0 2999550.0 2640370.0 3732400.0 2937270.0 3126480.0 3533800.0 4732150.0 2821370.0 True False 2518631.1558643603 3771688.13167173 3192905.792449692 2891309.970943813 4026118.6455489784 2918937.408405014 3442535.1099043456 3521542.072595117 3872910.8477938254 2796374.8567926427 0.9006772285004572 1.3487777300350003 1.1418017812217987 1.0339493519334737 1.4397635695261595 1.0438290851152003 1.2310706847982567 1.2593240366329925 1.3849755651987004 1.0 21.41512633768649 -4.244398422734781 23.880686508364217 1.2125066801263606 0.9006767620669154 0.2867194382495961 0.14594198766333086 2368.423652639103 3318940.9075360345 0.03448760261316004 0.9180563303485891 5.696414421540285e-05 4.244398422734781 -0.31182991805944527 T(ph)PEDGDYSYEIIEK ddPTM_KYSE-520_SHP099_60min_R1 1 TPEDGDYSYEIIEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PEDGDYSYEIIEK 164.66 1.6344e-07 151710000.0 130230.0 145900.0 88167.0 126360.0 119720.0 113490.0 127110.0 156360.0 133660.0 114130.0 True False 123005.88229293136 138890.74499963515 93850.38589218787 138369.21640848063 129141.28288637973 112781.66681302206 139959.5192740531 155817.62365469846 109390.7132944057 113118.89699179641 1.08740348044458 1.227829732195035 0.8296614304769439 1.2232192859740791 1.1416419919277085 0.9970187989120969 1.2372779703129817 1.3774676716128043 0.9670419019585994 1.0 16.78748043222661 -6.774093402563108 24.994932995069938 1.1769025038305057 1.0883034694344262 0.020345407873839427 0.1532813893181866 687.409724318296 1357797.4069106434 0.06220443547986549 0.04225130966569693 1.6823122117325323e-07 6.774093402563108 -0.08859903439607941 T(ph)PEEGGYSYDISEK ddPTM_KYSE-520_SHP099_60min_R1 10 TPEEGGYSYDISEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK;T(1)PEEGGYSYDISEK 336.06 1.7266999999999997e-42 8342360000.0 4617460.0 4057530.0 3500090.0 4087480.0 4204390.0 4193620.0 4135900.0 4438950.0 4633130.0 3952110.0 True False 4361320.2891216995 3862600.1683232994 3725711.4017420025 4475952.870254327 4535251.573293241 4167446.06203565 4553997.134494186 4423552.3185087135 3791870.3837027582 3917097.380095057 1.1134061438666256 0.9860873482368122 0.9511408678973382 1.142670818703442 1.1578092483325453 1.0639117840707135 1.162594822798016 1.1292934255316793 0.9680306655053696 1.0 21.90135356384564 -3.9156103219324545 20.274363865706587 1.0703391535310531 3.3283734118463846 0.027975990658761996 0.07850613670499264 2526.181505459703 614758.4588043119 0.01994107262804384 3378.463070916414 0.0001214478072717196 3.9156103219324545 2.258034258315331 T(ph)PEFLR ddPTM_KYSE-520_SHP099_60min_R1 2 TPEFLR 6 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 1 T(1)PEFLR;T(1)PEFLR 106.14 0.048058 4340600000.0 701260.0 587470.0 644640.0 620110.0 667990.0 662230.0 616130.0 636220.0 717860.0 666250.0 True False 662359.709872847 559247.059389552 686194.5258604676 679045.0679571299 720557.0126568055 658096.7769282545 678414.4332493311 634013.1013148646 587514.7197779595 660347.5433346572 1.0030471326175132 0.846898069106818 1.0391414835819437 1.028314672797983 1.0911784558447803 0.9965915426972944 1.027359668551864 0.9601203301419013 0.8897053160993033 1.0 19.33286599448089 -10.223028423119043 13.396276375162198 1.0000002301739164 0.9893132894333824 0.0021722820292744416 0.06864813147662636 0.0 0.0 0.06969354381644105 0.016903167210517593 5.983724323075285e-11 10.223028423119043 -0.010686940740534001 T(ph)PEGISEEQR ddPTM_KYSE-520_SHP099_60min_R1 1 TPEGISEEQR 10 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(1)PEGISEEQR 86.911 0.049331 403720000.0 525010.0 483250.0 503440.0 530370.0 522350.0 494780.0 538610.0 595080.0 623600.0 607980.0 True False 495886.64871851186 460033.9446269622 535892.5479324802 580776.2053384454 563455.9732350518 491691.89449067845 593057.9551270372 593015.8063727166 510369.9596767282 602593.7702012826 0.8229203042588249 0.7634230013252518 0.8893098044367065 0.9637939090283831 0.9350511092188065 0.8159591399798908 0.9841753839057112 0.984105438352994 0.8469552539619698 1.0 19.200826232423662 -4.907094767611123 4.626925784277531 0.9294402614975926 0.7945309613767361 0.47223292402456596 0.05813607223314986 0.17579263084476887 6.546196446493 0.015289416489300333 0.03358355853899798 1.2385262976128701e-05 4.907094767611123 -0.13490930012085656 T(ph)PELPEPSVK ddPTM_KYSE-520_SHP099_60min_R1 6 TPELPEPSVK 10 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(1)PELPEPSVK;T(1)PELPEPSVK;T(1)PELPEPSVK;T(1)PELPEPSVK;T(1)PELPEPSVK;T(1)PELPEPSVK 178.81 8.6655e-05 9302360000.0 7741560.0 6848930.0 6378250.0 5844830.0 6310490.0 6773250.0 6194340.0 7110930.0 8127610.0 7070100.0 True False 7312120.2343827505 6519897.122346478 6789402.200560829 6400320.885887778 6807089.661223441 6730975.63434048 6820524.338132632 7086263.84353354 6651840.904374878 7007464.414454568 1.0434758996848785 0.9304217241399947 0.9688814382783116 0.9133576008870753 0.971405526823967 0.9605436768906362 0.9733227219910917 1.011245070173518 0.9492507576141048 1.0 22.74046108225725 -7.0046336424674385 8.889187753435497 0.9866076326881477 0.9617320836794683 0.07015572109116464 0.03511492064967745 0.3019178585549716 281.2032692604554 0.01485938883021645 0.009409778008986298 9.893873596218496e-08 7.0046336424674385 -0.024875549008679387 T(ph)PENLITEIR ddPTM_KYSE-520_SHP099_60min_R1 2 TPENLITEIR 10 0 Q5VY60;Q7Z4H7-3;Q7Z4H7;Q5SYF9 Q5VY60 HAUS6 HAUS augmin-like complex subunit 6 1 T(1)PENLITEIR;T(1)PENLITEIR 134.56 0.0013852 493400000.0 97116.0 112140.0 119396.0 93011.0 92852.0 97880.0 92666.0 117091.0 120274.0 127613.0 True False 91728.78188405362 106752.6260744283 127092.4572003545 101850.73747522305 100158.92414438794 97269.09461325742 102033.58361300781 116684.83865024486 98435.27346080616 126482.44810141179 0.7252293362515154 0.8440113840051198 1.0048228754906263 0.8052558991707736 0.791880024840142 0.7690323524989686 0.8067015237655644 0.9225377939924806 0.7782524369063618 1.0 16.94857767126207 -10.478592537193451 3.1564365236342167 1.0037956145404254 0.8319827273690754 0.3091600472794086 0.077088452714245 33598328.42694208 41577880.504329234 1115708.9690714579 0.019841372725908784 3.3220599295637523e-11 10.478592537193451 -0.17181288717135001 T(ph)PESFLGPNAALVDLDSLVSR ddPTM_KYSE-520_SHP099_60min_R1 1 TPESFLGPNAALVDLDSLVSR 21 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 T(0.994)PES(0.006)FLGPNAALVDLDSLVSR 111.4 0.00069101 297170000.0 27042.0 23944.0 18084.0 9634.3 5780.4 18825.0 17444.0 18998.0 21185.0 27506.0 True False 25541.926353109488 22793.694299323284 19249.72357542304 10549.940975342082 6235.284594022968 18707.506192220815 19207.40975703394 18932.100372166537 17338.33803039045 27262.31823934417 0.93689487918339 0.8360878960919801 0.7060926883188682 0.38697886521318353 0.22871439395877896 0.686203793381837 0.7045405892634022 0.6944420575666338 0.6359817928237765 1.0 14.73462062585258 -10.165310015204662 9.547612467879524 1.0000000038837702 0.6379667986403039 0.230657141543139 0.19330955725966162 1.776047677019736e-08 1.6301308817068984e-09 0.20889456258242314 0.050664372547661776 6.834236204672096e-11 10.165310015204662 -0.36203320524346627 T(ph)PESFLGPNAALVDLDSLVSRPGPTPPGAK ddPTM_KYSE-520_SHP099_60min_R1 4 TPESFLGPNAALVDLDSLVSRPGPTPPGAK 30 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 T(0.791)PES(0.209)FLGPNAALVDLDSLVSRPGPTPPGAK;T(0.991)PES(0.009)FLGPNAALVDLDSLVSRPGPTPPGAK;T(0.962)PES(0.038)FLGPNAALVDLDSLVSRPGPTPPGAK;T(0.546)PES(0.454)FLGPNAALVDLDSLVSRPGPTPPGAK 206.65 4.1361999999999995e-16 574243000.0 220414.0 233778.0 174198.0 154475.0 158358.0 223960.0 153527.0 193817.0 276845.0 202649.0 True False 208187.19603558414 222546.95397206777 185427.08180665475 169156.2575553977 170819.87366623228 222562.18256625594 169047.00743912795 193144.694064228 226576.92669452165 200853.68751853652 1.0365116946950292 1.108005318306786 0.9231948096025966 0.8421864673994919 0.8504691936535521 1.108081137647602 0.8416425385445155 0.9616188602283089 1.1280695390449884 1.0 17.615785422829752 -9.362579503873905 11.460017447639485 0.9999999933116864 0.9716040294926902 0.0008999724686413746 0.10801919850607725 0.0 0.0 0.10779544565979186 0.02614423578916769 4.339308190730538e-10 9.362579503873905 -0.028395963818996228 T(ph)PESKPTILVK ddPTM_KYSE-520_SHP099_60min_R1 1 TPESKPTILVK 11 1 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 T(0.999)PES(0.001)KPTILVK 117.93 0.00067093 1128000000.0 1573500.0 1321100.0 1229300.0 1309700.0 1335700.0 1453400.0 1347700.0 1132800.0 1369400.0 1467600.0 True False 1486214.8183055143 1257632.3729884727 1308542.644949544 1434173.4942243348 1440811.9909065953 1444328.7914886454 1483938.6682844905 1128870.5811975088 1120751.4797647696 1454598.2057755233 1.0217356328396778 0.8645909007690287 0.8995904434323777 0.985958520043479 0.9905223209995795 0.9929400337178316 1.0201708364498663 0.776070379239639 0.7704886994324578 1.0 20.472189271195532 -7.2620701268630485 24.999963386781943 0.8299596527262292 0.9638510883054678 0.33053129027918626 0.07609558866709544 59.91323200107224 2374564.2265979694 0.03859753005128771 0.020296019495996593 5.469276416783326e-08 7.2620701268630485 0.13389143557923866 T(ph)PESTKPGPVCQPPVSQSR ddPTM_KYSE-520_SHP099_60min_R1 2 TPESTKPGPVCQPPVSQSR 19 1 Q6AI12 Q6AI12 ANKRD40 Ankyrin repeat domain-containing protein 40 1 T(0.992)PES(0.007)T(0.002)KPGPVCQPPVSQSR;T(0.957)PES(0.037)T(0.006)KPGPVCQPPVSQSR 173.55 1.5490000000000002e-08 1926040000.0 812030.0 680350.0 671480.0 664660.0 615080.0 694550.0 761640.0 600920.0 666340.0 716990.0 True False 766985.0771583277 647664.9647738296 714764.6752059875 727829.0865626851 663483.2966735254 690215.0558197584 838634.0040900795 598835.5487757825 545349.4530644496 710638.0264097792 1.079290790324323 0.9113851788172715 1.0058069630991415 1.0241910220309445 0.9336445166402301 0.971261078311275 1.1801141691318573 0.8426731001170384 0.767408206143449 1.0 19.43875536412619 T(ph)PETLLPFAEAEAFLK ddPTM_KYSE-520_SHP099_60min_R1 2 TPETLLPFAEAEAFLK 16 0 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 T(0.888)PET(0.112)LLPFAEAEAFLK;T(1)PETLLPFAEAEAFLK 238.17 2.312e-22 2783100000.0 312640.0 344900.0 295850.0 219757.0 303810.0 301810.0 237627.0 326660.0 317470.0 392110.0 True False 295297.2359676111 328330.4862945457 314920.9643767368 240642.63920764843 327718.11855755985 299926.29183926503 261648.6561760324 325526.8927030168 259825.45076743243 388636.2104569641 0.7598294446634201 0.844827315263521 0.8103232686590067 0.6191976782726893 0.8432516315765434 0.7717404703144036 0.6732482695536325 0.8376133873893469 0.6685569789339133 1.0 18.568060802053076 -10.315964573304752 5.40957173838742 1.0000475794174783 0.7613519812355334 0.4718077643753259 0.07653818283421596 4.235177139943366e-05 5.355431551550063e-06 0.071461772294176 0.017328576966482673 4.830982081931666e-11 10.315964573304752 -0.23869559818194497 T(ph)PETLLPFAEAEAFLKK ddPTM_KYSE-520_SHP099_60min_R1 1 TPETLLPFAEAEAFLKK 17 1 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 T(0.996)PET(0.004)LLPFAEAEAFLKK 158.15 6.219e-07 1425300000.0 757280.0 843230.0 856210.0 626800.0 734670.0 571400.0 627160.0 649190.0 917000.0 684210.0 True False 715272.1687997469 802719.965085965 911402.6665844369 686370.8835457085 792484.3492995034 567833.6806499326 690559.4532917573 646938.1114120851 750495.9156888378 678148.4317073259 1.0547427898623274 1.1836936097677233 1.3439574936269683 1.0121248556421218 1.1686001356728382 0.8373294902715299 1.0183013349351633 0.9539771547997763 1.106683847663509 1.0 19.371241556428103 -5.8209624865972645 1.8806457733901423 0.9880514566183163 1.180972560889799 0.34480090133802843 0.10791926970320638 0.35678559965068135 2.5998115809062017 0.03744837315023383 0.04696054116784551 1.5102105972022081e-06 5.8209624865972645 0.19292110427148268 T(ph)PGRTPGK ddPTM_KYSE-520_SHP099_60min_R1 1 TPGRTPGK 8 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 T(0.601)PGRT(0.399)PGK 72.848 0.063324 1867400000.0 2522700.0 2085900.0 1883200.0 1952600.0 1910300.0 2463500.0 2154700.0 1808100.0 2584000.0 2772100.0 True False 2382760.8021222292 1985690.233000269 2004594.0852265374 2138174.5169294053 2060629.7418798117 2448124.3827110752 2372518.103845505 1801828.123113712 2114810.7373391045 2747541.3506611628 0.8672338276360596 0.7227153223817492 0.7295956018074691 0.7782137715288177 0.7499904383182244 0.8910236718082382 0.8635058770906531 0.6557965443104701 0.7697102490669343 1.0 21.389709763308463 T(ph)PIKNEPIDLSK ddPTM_KYSE-520_SHP099_60min_R1 2 TPIKNEPIDLSK 12 1 F8VSE7;Q96AV8-2;Q96AV8-3;Q96AV8;F8VXV5 F8VSE7 E2F7 Transcription factor E2F7 1 T(1)PIKNEPIDLSK;T(1)PIKNEPIDLSK 127.71 0.00026814 259820000.0 1202150.0 1104630.0 950510.0 1010670.0 1034710.0 1152220.0 1091760.0 1009850.0 1094510.0 1175590.0 True False 1135464.343073387 1051561.9167165663 1011781.3954697729 1106723.7729309853 1116135.790305429 1145028.567585691 1202125.755350801 1006347.0660507625 895774.5743517876 1165175.1871951795 0.9745009639337473 0.902492542128275 0.868351305957126 0.9498346558469899 0.9579124260208469 0.9827093643677861 1.0317124571151992 0.8636873468557552 0.7687896070874153 1.0 20.152115453557006 -10.173806798482872 4.356495968192196 1.0000115579185362 0.9251962384190016 0.0955976003774287 0.07124254578742159 1.3795446943966526e-05 2.6162417382721356e-06 0.07308173421557772 0.017720466380907497 6.701826825447602e-11 10.173806798482872 -0.07481531949953468 T(ph)PIS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 2 TPISPLK 7 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 2 T(1)PIS(1)PLK;T(1)PIS(1)PLK 88.49600000000001 0.018174 387550000.0 2055200.0 1947040.0 1741510.0 1814440.0 1907460.0 1851680.0 1856670.0 1912080.0 1967070.0 1999020.0 True False 1941193.9590603733 1853501.2758333767 1853770.5211145198 1986883.8320687236 2057566.250037203 1840122.9782741794 2044360.3229530053 1905447.4407628267 1609899.673799391 1981310.2380140284 0.9797526514606487 0.9354927059233483 0.9356285984635357 1.0028130849716306 1.0384876686952418 0.9287404581922676 1.0318224191897254 0.9617107932944197 0.8125429541075193 1.0 20.918023367674266 -7.545758229141114 24.949024232298235 0.8998898752609003 0.978318174725062 0.20869018577424958 0.05554369713875554 315.3607066388655 343879.5134687657 0.03561249934994216 0.013461765696413934 2.846045054037101e-08 7.545758229141114 0.07842829946416174 T(ph)PLGQR ddPTM_KYSE-520_SHP099_60min_R1 1 TPLGQR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(1)PLGQR 93.561 0.067517 1226900000.0 606700.0 473380.0 499410.0 496740.0 425130.0 500700.0 475900.0 476800.0 527540.0 559280.0 True False 573045.1415735345 450638.1142421339 531602.767684252 543950.0202496733 458585.31234118476 497574.9455747649 524008.61633641605 475146.09208595636 431752.0342011878 554325.2143132556 1.0337706580485801 0.8129489740069321 0.9590088164090568 0.981283200194247 0.8272856808603205 0.897622790244536 0.9453090041837655 0.8571612472555611 0.7788785771473128 1.0 19.08037310670063 -5.755012540948908 24.991173518841432 0.8809432469851584 0.9380708992716184 0.13080556095078433 0.07718629075587792 355.73322881870814 1383281.6826242583 0.02257873223740113 0.028449465100812532 1.7578728518310562e-06 5.755012540948908 0.057127652286459996 T(ph)PLLSSLSATSNNSTVACIDR ddPTM_KYSE-520_SHP099_60min_R1 1 TPLLSSLSATSNNSTVACIDR 21 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 T(0.905)PLLS(0.05)S(0.04)LS(0.004)ATSNNSTVACIDR 121.26 4.5523000000000004e-05 0.0 167190.0 228410.0 192120.0 187700.0 182170.0 189570.0 150030.0 173850.0 251450.0 163390.0 True False 157915.63741499803 217436.8407496005 204504.36260286867 205538.95156593726 196505.7425944854 188386.82331257884 165196.49655169697 173246.9549268949 205793.0185386678 161942.49171549652 0.9751340475384747 1.3426793576302225 1.2628208967053909 1.269209516221547 1.2134291655812621 1.1632945826444376 1.0200935826152233 1.0698054172913323 1.2707783878008292 1.0 17.305122055160677 -6.474609405013422 3.801889960880653 1.0951089517696673 1.2247812075952327 0.20248071962128322 0.11242227024743441 0.35938870541575596 10.679368095725694 0.04196031541141579 0.03499266215811501 3.352668352836154e-07 6.474609405013422 0.1296722558255654 T(ph)PLSEAEFEEIMNR ddPTM_KYSE-520_SHP099_60min_R1 8 TPLSEAEFEEIMNR 14 0 F8WJN3;Q16630-3;Q16630;Q16630-2 F8WJN3 CPSF6 Cleavage and polyadenylation specificity factor subunit 6 1 T(1)PLSEAEFEEIMNR;T(1)PLSEAEFEEIMNR;T(1)PLSEAEFEEIMNR;T(1)PLSEAEFEEIMNR;T(0.999)PLS(0.001)EAEFEEIMNR;T(1)PLSEAEFEEIMNR;T(1)PLSEAEFEEIMNR;T(1)PLSEAEFEEIMNR 218.68 3.0307e-13 879045000.0 438836.4 443260.2 383058.89999999997 372952.4 356535.2 418227.9 339378.7 442430.5 478097.2 424869.1 True False 414493.2700933247 421965.3146448757 407751.4896099098 408397.6839637723 384592.4918322087 415617.58454233734 373686.4110129268 440895.8118595553 391286.8003296284 421105.0903171583 0.9842988831627424 1.0020427782695989 0.9682891491594388 0.9698236695647271 0.913293381332793 0.9869687973358668 0.8873946660950647 1.0469971083168135 0.9291903834145722 1.0 18.683820789342857 -10.647332294982984 2.5237641876326253 1.0043922750992023 0.965873705708892 0.05374871056714514 0.04354819367404873 64587252.63438468 54801394.93178187 1845301.87214248 0.010523148320194032 2.2525150689425883e-11 10.647332294982984 -0.03851856939031029 T(ph)PLTQDPASITDNLLQLPAR ddPTM_KYSE-520_SHP099_60min_R1 4 TPLTQDPASITDNLLQLPAR 20 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 T(0.979)PLT(0.021)QDPASITDNLLQLPAR;T(0.984)PLT(0.016)QDPASITDNLLQLPAR;T(0.944)PLT(0.056)QDPASITDNLLQLPAR;T(0.855)PLT(0.145)QDPASITDNLLQLPAR 109.84 0.00049478 546491000.0 209388.0 253115.0 202091.0 174741.0 164280.0 263999.0 190721.0 261676.0 250899.0 276308.0 True False 197772.8302353705 240954.97546663918 215118.10921703267 191348.33210220287 177207.90137466142 262351.2843155431 210000.939937587 260768.3070316372 205342.06624908792 273860.12608437124 0.7221673087758689 0.8798468726053439 0.785503579118191 0.6987082597166847 0.6470744898440124 0.9579754748039424 0.7668182401730496 0.9521952346991154 0.7498063671592184 1.0 18.063079699998145 -6.268240233748588 24.999435559959014 0.874962460327851 0.7535533464169389 0.34927709383430394 0.09388895996662064 722.2419282471162 2654899.8132819417 0.03225503851965569 0.02908467492316043 5.392122700741399e-07 6.268240233748588 -0.12140911391091203 T(ph)PNGPNIDKK ddPTM_KYSE-520_SHP099_60min_R1 7 TPNGPNIDKK 10 1 Q92598-2;Q92598-3;Q92598;Q92598-4;A0A0A0MSM0;Q5TBM3 Q92598-2 HSPH1 Heat shock protein 105 kDa 1 T(1)PNGPNIDKK;T(1)PNGPNIDKK;T(1)PNGPNIDKK;T(1)PNGPNIDKK;T(1)PNGPNIDKK;T(1)PNGPNIDKK;T(1)PNGPNIDKK 112.72 0.0011417 23488330000.0 14830150.0 13044890.0 12213360.0 12317910.0 12499960.0 12341520.0 12392420.0 12864440.0 14687550.0 12129730.0 True False 14007492.016328903 12418193.903620915 13000652.72766694 13488600.46288531 13483635.736956475 12264491.995825602 13645166.751964137 12819816.260222856 12020661.163005015 12022270.02898715 1.165128713841491 1.0329325388366044 1.08138086204359 1.1219678505276174 1.1215548897542473 1.0201477729459099 1.1349908726940907 1.066339071515839 0.999866176189833 1.0 23.51920599373453 -7.674588389862015 3.747543307533977 0.9982966045596703 1.0932320463285796 0.44990660803338456 0.04212369496962825 0.20664047896116827 5.319536787935212 0.03313913819666841 0.010532602151460539 2.1154930853153542e-08 7.674588389862015 0.09493544176890933 T(ph)PNNRPDAPK ddPTM_KYSE-520_SHP099_60min_R1 2 TPNNRPDAPK 10 1 Q9BVJ6-3;Q9BVJ6;Q9BVJ6-2;Q5TAP6 Q9BVJ6-3;Q5TAP6 UTP14A;UTP14C U3 small nucleolar RNA-associated protein 14 homolog A;U3 small nucleolar RNA-associated protein 14 homolog C 1 T(1)PNNRPDAPK;T(1)PNNRPDAPK 89.62899999999999 0.010167 431210000.0 554010.0 448760.0 490460.0 549210.0 558930.0 500770.0 525850.0 528920.0 536830.0 653520.0 True False 523277.96090844483 427200.8959975073 522075.83636374614 601406.753273993 602914.6111233237 497644.5086787996 579008.0498014383 527085.299970856 439355.2043830304 647730.3212308662 0.8078639269411881 0.6595351213228798 0.8060080240981433 0.9284832492188329 0.9308111591528085 0.76828966063089 0.8939029574857069 0.8137418964257357 0.6782995792880815 1.0 19.305033754824578 -11.485232345910045 2.285394884529558 3.396127330623807 0.8135758500196769 0.29506692245850996 0.08807341285019042 6091426.84048933 592473.4531826746 75840755.2418786 0.024841494224157205 3.27165615679048e-12 11.485232345910045 -2.58255148060413 T(ph)PPAPSPFDLPELK ddPTM_KYSE-520_SHP099_60min_R1 6 TPPAPSPFDLPELK 14 0 O95239 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 T(1)PPAPSPFDLPELK;T(1)PPAPSPFDLPELK;T(1)PPAPSPFDLPELK;T(1)PPAPSPFDLPELK;T(1)PPAPSPFDLPELK;T(1)PPAPSPFDLPELK 150.12 1.3083e-05 1365820000.0 881433.0 875859.0 736206.0 655503.0 671507.0 757474.0 612011.0 735087.0 889922.0 835971.0 True False 832538.1543968775 833781.4189488385 783663.0167312475 717801.8080358361 724350.780547813 752746.323795286 673879.0445317639 732537.1547675952 728334.5979080073 828564.9473155964 1.004795287435407 1.0062957908732955 0.9458075909078424 0.8663193034672619 0.8742232976359683 0.90849404893853 0.8133086569918418 0.8841034817377754 0.8790313906805766 1.0 19.660255262405826 -4.993741555711159 2.8455627733128015 0.8816496059908373 1.0061439378267354 0.5167767327699424 0.0445822911668419 0.18218407042892826 2.982765104247187 0.01173556102747172 0.026735149349453396 1.014514933794497e-05 4.993741555711159 0.12449433183589809 T(ph)PPEDCEGPFRPAEILK ddPTM_KYSE-520_SHP099_60min_R1 6 TPPEDCEGPFRPAEILK 17 1 P49790-3;P49790 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 T(1)PPEDCEGPFRPAEILK;T(1)PPEDCEGPFRPAEILK;T(1)PPEDCEGPFRPAEILK;T(1)PPEDCEGPFRPAEILK;T(1)PPEDCEGPFRPAEILK;T(1)PPEDCEGPFRPAEILK 146.89 2.0679e-05 5344602000.0 4437535.0 3842586.0 3729359.0 3844880.0 3964340.0 4073893.0 3856283.0 4009255.0 4544751.0 4151895.0 True False 4191376.0875432924 3657982.400720825 3969759.448325376 4210296.239194677 4276311.003990898 4048466.322653122 4246113.719335254 3995347.830172152 3719538.7822494647 4115112.44042543 1.0185325791754012 0.8889143258361742 0.9646782453203084 1.02313030327779 1.039172335118212 0.9838045451401036 1.0318341918492708 0.9708963942086364 0.9038729405568636 1.0 21.97250042039099 -5.009556908573976 24.590791316327184 0.9950633935060778 0.9469916678706352 0.10981831636636907 0.046505263925208276 672.8518876160174 1731327.260657321 0.012468515243036419 0.023829724832480127 9.782347615995973e-06 5.009556908573976 -0.0480717256354426 T(ph)PPFSESEEQLHLHDAGMKPR ddPTM_KYSE-520_SHP099_60min_R1 7 TPPFSESEEQLHLHDAGMKPR 21 1 Q8IVM0-2 Q8IVM0-2 1 T(1)PPFSESEEQLHLHDAGMKPR;T(1)PPFSESEEQLHLHDAGMKPR;T(0.551)PPFS(0.449)ESEEQLHLHDAGMKPR;T(1)PPFSESEEQLHLHDAGMKPR;T(1)PPFSESEEQLHLHDAGMKPR;T(1)PPFSESEEQLHLHDAGMKPR;T(1)PPFSESEEQLHLHDAGMKPR 191.09 6.102100000000001e-13 5527450000.0 2220640.0 2167793.0 1834109.0 2390070.0 2079409.0 1940269.0 1936864.0 2156289.0 2558800.0 1909198.0 True False 2097456.6724639107 2063648.9703563682 1952338.6008181605 2617221.5341992504 2243046.6580812247 1928159.061464757 2132661.1150910193 2148809.336740636 2094186.4220987977 1892283.9910535698 1.1084259457778884 1.090559863166938 1.0317365733941204 1.3831018740173646 1.1853647067173887 1.0189586080000672 1.1270301525425972 1.1355638724947623 1.1066977430448028 1.0 20.851697191689958 -6.234846061724096 24.791338902387288 1.0892090528496956 1.1612758464126292 0.15099106599761347 0.0954671621531728 1639.8694154854804 1528751.3025787915 0.03345142706899959 0.033440928635974074 5.823095843087678e-07 6.234846061724096 0.07206679356293355 T(ph)PPGLQHEYAAPADYFR ddPTM_KYSE-520_SHP099_60min_R1 4 TPPGLQHEYAAPADYFR 17 0 Q5JRG1;H7BYF2;Q9BVL2-2;Q9BVL2-3;Q9BVL2 Q5JRG1 NUPL1 Nucleoporin p58/p45 1 T(1)PPGLQHEYAAPADYFR;T(1)PPGLQHEYAAPADYFR;T(1)PPGLQHEYAAPADYFR;T(1)PPGLQHEYAAPADYFR 184.3 4.8039e-12 1903380000.0 397163.0 337554.0 326005.0 340522.0 344638.0 397284.0 334815.0 369679.0 397936.0 363253.0 True False 375131.57666518795 321337.39916111657 347019.80392644287 372885.10849832796 371759.0498780163 394804.40319098235 368661.36767950695 368396.669832727 325680.85355022183 360034.8610265579 1.041931260755098 0.8925174585730273 0.9638505641842416 1.0356916756203287 1.0325640378768586 1.0965727098350615 1.0239601982662248 1.0232249976636354 0.9045814414238016 1.0 18.457777079311654 -3.9288737735608454 21.65365606902012 1.0008588869042834 2.467400104204924 0.04614130422663543 0.058984027496952425 2461.5136590781703 1117243.0246690386 0.015204379700931107 85877.01136133433 0.0001177948291046528 3.9288737735608454 1.4665412173006405 T(ph)PPKS(ph)PATPK ddPTM_KYSE-520_SHP099_60min_R1 1 TPPKSPATPK 10 1 A0A669KB77;P11137-3;P11137;P11137-2;P11137-4 A0A669KB77;P11137-4 MAP2 Microtubule-associated protein 2 2 T(1)PPKS(0.821)PAT(0.18)PK 59.607 0.033529 277470000.0 629020.0 505140.0 455020.0 545210.0 538020.0 530870.0 552280.0 693880.0 652570.0 648360.0 True False 594127.0066797178 480872.3161694016 484351.317257741 597026.5944766365 580359.1130849487 527556.6434137725 608109.8521333815 691473.0922328098 534079.7379509977 642616.0348164471 0.9245443227220755 0.7483042596451162 0.7537180696029289 0.9290564849462052 0.9031195638476699 0.8209515711267001 0.946303576609442 1.0760283820653773 0.8311024142177669 1.0 19.293597454408214 -6.336356669994199 0.7450758794370562 0.9744402085230297 0.8150116328745375 0.28621103565631545 0.08429352340422501 0.8422583077933775 1.0101683539629096 0.06222033284086936 0.056824606121468904 4.6093886703024666e-07 6.336356669994199 -0.15942857564849222 T(ph)PPKS(ph)PSSAK ddPTM_KYSE-520_SHP099_60min_R1 3 TPPKSPSSAK 10 1 A0A0G2JQJ7;A0A0G2JS76;A0A0G2JPD5;A0A0G2JMX7;P10636;P10636-9;I3L170;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 2 T(1)PPKS(0.497)PS(0.497)S(0.006)AK;T(1)PPKS(0.912)PS(0.085)S(0.003)AK;T(1)PPKS(0.818)PS(0.097)S(0.086)AK 101.45 0.0032281999999999996 1159600000.0 3700680.0 3109160.0 2843210.0 3113060.0 3199300.0 3052270.0 2849690.0 3201610.0 3719050.0 3001030.0 True False 3495395.9032773157 2959791.2866556942 3026487.8658968457 3408924.286424381 3451066.7084730593 3033219.6507479292 3137764.4754942725 3190504.362171388 3043764.269621125 2974443.208966011 1.1751429285121233 0.9950740621753507 1.0174972770614525 1.1460713978833728 1.1602395695672851 1.0197604854598485 1.0549081811466274 1.0726391926240493 1.0233055586491469 1.0 21.50418820250358 -7.738027750144265 0.7864302852027074 1.0003228580040258 1.0845074548942109 0.19326311910612393 0.058945577401152645 1.183422604095375 1.6002813035916938 0.05899196337541678 0.02322586375671711 1.8279834096298212e-08 7.738027750144265 0.08418459689018509 T(ph)PPKSPATPK ddPTM_KYSE-520_SHP099_60min_R1 1 TPPKSPATPK 10 1 A0A669KB77;P11137-3;P11137;P11137-2;P11137-4 A0A669KB77;P11137-4 MAP2 Microtubule-associated protein 2 1 T(1)PPKSPATPK 86.46700000000001 0.011484000000000001 1376100000.0 2506600.0 2112500.0 1779500.0 2162400.0 2059300.0 2275400.0 2037300.0 2554400.0 2527600.0 2228300.0 True False 2367553.9012167803 2011012.3290728563 1894209.417300669 2367913.845850736 2221355.1941857813 2261198.384583227 2243250.1661319192 2545539.3826014395 2068651.5556108046 2208558.9955911664 1.0719903366597892 0.910554045912895 0.8576675656307948 1.072153313802204 1.0057939129632305 1.0238342689043587 1.0157076041935058 1.15257930065847 0.9366521608616062 1.0 21.074673939854843 -5.281552864170411 24.941153323144672 1.03408653205693 0.9431189716553776 0.21347257935184183 0.0723592320515413 1059.0838119376197 1313284.1020679404 0.019956330428766003 0.029643235850513143 5.229343085210015e-06 5.281552864170411 -0.0909675604015523 T(ph)PPKSPSS(ph)AK ddPTM_KYSE-520_SHP099_60min_R1 1 TPPKSPSSAK 10 1 A0A0G2JQJ7;A0A0G2JS76;A0A0G2JPD5;A0A0G2JMX7;P10636;P10636-9;I3L170;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 2 T(1)PPKS(0.317)PS(0.317)S(0.366)AK 55.841 0.046682999999999995 751070000.0 1683500.0 1383500.0 1312900.0 1447000.0 1427000.0 1386700.0 1327100.0 1467800.0 1673300.0 1319100.0 True False 1590112.8990259536 1317034.583324163 1397531.6347142716 1584522.4449435866 1539296.7814806553 1378045.0909297524 1461256.2192478634 1462708.5443870942 1369470.9004603417 1307413.8002442708 1.2162277151494536 1.0073586366291183 1.068928318221181 1.2119517513487637 1.1773600532540351 1.0540236692256768 1.1176692635299164 1.1187801016891583 1.047465538611017 1.0 20.318284399880792 -7.924535102920477 2.7867063756106507 1.0004169126832845 1.118930871457017 0.2857465636205201 0.06384773667441761 0.33261922812232875 5.453100138048374 0.06238799390384723 0.016916421998985937 1.1897751587677552e-08 7.924535102920477 0.1185139587737325 T(ph)PPKSPSSAK ddPTM_KYSE-520_SHP099_60min_R1 1 TPPKSPSSAK 10 1 A0A0G2JQJ7;A0A0G2JS76;A0A0G2JPD5;A0A0G2JMX7;P10636;P10636-9;I3L170;P10636-3;P10636-2;P10636-4;P10636-6;P10636-5;P10636-7;P10636-8 A0A0G2JQJ7 MAPT Microtubule-associated protein tau;Microtubule-associated protein 1 T(0.998)PPKS(0.002)PSSAK 70.41199999999999 0.06364500000000001 744410000.0 2150900.0 1817000.0 1719300.0 1787900.0 1901600.0 2078700.0 1895400.0 1992000.0 2129500.0 1743200.0 True False 2031585.28928715 1729708.5926273952 1830128.8289772624 1957821.4784482662 2051245.1013760406 2065726.0622453857 2087005.529321379 1985090.2169362933 1742836.4803264798 1727756.6041890772 1.1758515547626425 1.0011297820732303 1.0592515314599151 1.1331581506917 1.1872303635839916 1.1956117298217097 1.2079279710239714 1.1489408937134382 1.0087280095476645 1.0 20.720468563062894 -3.856805344505668 19.755902469288035 1.1157363774196205 41.72138009549845 0.05236696379573025 0.07909975940360758 2407.337992483139 332000.5537671956 0.020200878671652236 1728.7399598493093 0.00013905757626857883 3.856805344505668 40.60564371807883 T(ph)PPMLRPVDPQIPHLVAVK ddPTM_KYSE-520_SHP099_60min_R1 3 TPPMLRPVDPQIPHLVAVK 19 1 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 1 T(1)PPMLRPVDPQIPHLVAVK;T(1)PPMLRPVDPQIPHLVAVK;T(1)PPMLRPVDPQIPHLVAVK 136.56 6.619199999999999e-06 2523883000.0 1425200.0 1206290.0 1134380.0 1272570.0 1308360.0 1310030.0 1156250.0 1324680.0 1384280.0 1229840.0 True False 1346141.3149342367 1148338.0177217969 1207503.9498721745 1393514.6701878784 1411320.4884499165 1301853.6168390466 1273135.0339125476 1320084.9942626373 1132929.6468590444 1218944.5744010427 1.1043498967914067 0.9420756626986588 0.9906143193307294 1.1432141374209857 1.1578217074746013 1.0680170732773009 1.0444568692043548 1.082973764341412 0.9294349149679232 1.0 20.217201097206274 -7.755413322859787 24.997770959823974 0.9647174463423637 1.0648923417952765 0.29254211804942476 0.06338159634928384 182.5045938971244 757104.6426652146 0.04948637336807055 0.017620983130302723 1.75625137449111e-08 7.755413322859787 0.1001748954529128 T(ph)PPPPSSTFPK ddPTM_KYSE-520_SHP099_60min_R1 5 TPPPPSSTFPK 11 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;A0A1W2PQ63;E9PGF6 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(1)PPPPSSTFPK;T(1)PPPPSSTFPK;T(1)PPPPSSTFPK;T(1)PPPPSSTFPK;T(1)PPPPSSTFPK 131.17 0.00067296 17025800000.0 3823000.0 3273780.0 2837430.0 2475320.0 2802820.0 3143140.0 2609750.0 3168040.0 3722040.0 3113960.0 True False 3610930.569038442 3116502.6947560366 3020335.2778485194 2710573.6685679047 3023385.988135672 3123522.497371415 2873568.9987055366 3157050.8086660923 3046211.3609928903 3086372.737024221 1.1699593265977273 1.0097622550155319 0.9786035372903881 0.8782392470137456 0.979591982480613 1.0120367057100863 0.9310505384635225 1.0229000440530125 0.9869875159440227 1.0 21.557480874066158 -4.253176846184001 2.565989311108791 0.971487432148919 1.2143003735456226 0.6853890674774039 0.039732608868848544 0.2990692624916417 2.484989170445227 0.010654720008233087 0.15887892269397436 5.582428300769482e-05 4.253176846184001 0.24281294139670362 T(ph)PPPPT(ph)LSPAAITVGR ddPTM_KYSE-520_SHP099_60min_R1 1 TPPPPTLSPAAITVGR 16 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C4H9 E7EX82 PHC3 Polyhomeotic-like protein 3 2 T(1)PPPPT(0.902)LS(0.098)PAAITVGR 84.375 0.0073227000000000006 189220000.0 56448.0 56401.0 59975.0 56984.0 41978.0 44509.0 60344.0 51805.0 50750.0 55831.0 True False 53316.71691370181 53691.411300373045 63841.084463392915 62399.74222713567 45281.429777852085 44231.20282122475 66444.1604206865 51625.300546377905 41535.079303389895 55336.38077586074 0.9635020607809616 0.9702732731627205 1.1536909998140348 1.127644080661599 0.8182940254308264 0.7993150654427986 1.2007319504652403 0.932935978510873 0.7505926249789838 1.0 15.755940668465415 -5.753207247912691 24.999834239576206 0.921929592463382 1.0549496714406477 0.20876779916261945 0.1302478524556633 332.3459262115349 1009282.9550924266 0.04093713720782352 0.051940210544632534 1.7651952579765452e-06 5.753207247912691 0.13302007897726564 T(ph)PPPPTLSPAAITVGR ddPTM_KYSE-520_SHP099_60min_R1 1 TPPPPTLSPAAITVGR 16 0 E7EX82;Q8NDX5-2;Q8NDX5;Q8NDX5-7;H7C4H9 E7EX82 PHC3 Polyhomeotic-like protein 3 1 T(0.997)PPPPT(0.001)LS(0.002)PAAITVGR 87.932 0.010742 464650000.0 111890.0 144070.0 112440.0 61344.0 109780.0 140790.0 80912.0 102940.0 177540.0 104980.0 True False 105683.23865281475 137148.6609465212 119688.06231036084 67174.11531625391 118419.06143724345 139911.2773866011 89091.37458502232 102582.92516637652 145303.2114191889 104049.958873204 1.015697072803278 1.3181039419117073 1.1502941818190773 0.6455948281355186 1.138098109020396 1.3446548071883235 0.8562365189744062 0.9859006796089634 1.39647543346227 1.0 16.666916869270402 T(ph)PPRDLPTIPGVTSPSSDEPPMEASQSHLR ddPTM_KYSE-520_SHP099_60min_R1 7 TPPRDLPTIPGVTSPSSDEPPMEASQSHLR 30 1 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 1 T(0.966)PPRDLPT(0.034)IPGVTSPSSDEPPMEASQSHLR;T(0.687)PPRDLPT(0.311)IPGVT(0.001)SPSSDEPPMEASQSHLR;T(0.709)PPRDLPT(0.262)IPGVT(0.023)S(0.002)PS(0.003)S(0.001)DEPPMEASQSHLR;T(0.995)PPRDLPT(0.005)IPGVTSPSSDEPPMEASQSHLR;T(0.996)PPRDLPT(0.004)IPGVTSPSSDEPPMEASQSHLR;T(0.778)PPRDLPT(0.22)IPGVT(0.001)SPSSDEPPMEASQSHLR;T(0.998)PPRDLPT(0.002)IPGVTSPSSDEPPMEASQSHLR 162.08 1.517e-09 13280720000.0 347354.0 647661.0 643626.0 1086369.0 360617.0 420966.0 356218.0 323631.0 437901.0 532588.0 True False 328085.5811869682 616546.393401019 685115.1617980106 1189617.1831312503 388995.5062699435 418338.5950445911 392227.99179265776 322508.3995970432 358389.21698588633 527869.6846671946 0.6215276056131466 1.1679897734413984 1.297886924932911 2.2536190610780515 0.7369157910918734 0.7925035424383966 0.7430394341359938 0.6109621540406789 0.6789350239194728 1.0 19.009822289458157 T(ph)PPRWAEDQNSLLK ddPTM_KYSE-520_SHP099_60min_R1 2 TPPRWAEDQNSLLK 14 1 P49792;Q7Z3J3;J3KNE0;A6NKT7 P49792 RANBP2;RGPD4;RGPD3 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3 1 T(1)PPRWAEDQNSLLK;T(1)PPRWAEDQNSLLK 107.63 0.0011160999999999999 2234800000.0 1419620.0 1341350.0 1395470.0 1020160.0 1130450.0 1225250.0 1031330.0 927030.0 1580740.0 1124780.0 True False 1340870.8486576912 1276909.5325926018 1485424.229030946 1117115.699677713 1219409.983619345 1217602.7602665892 1135586.9012108357 923814.3493004286 1293717.4632126202 1114815.3242655983 1.202773965760661 1.1454000539809457 1.3324397294318608 1.0020634587290322 1.093822409036806 1.0922013124180041 1.0186323030309266 0.8286703000867032 1.1604769283781387 1.0 20.08837330831918 -5.650362202887046 1.0326925078379383 1.0021725343892527 1.2187096160518816 0.388901045931499 0.10153884457851473 0.5487005487600545 1.2310937113995646 0.04356141999744996 0.07645707263022776 2.236854816860562e-06 5.650362202887046 0.21653708166262886 T(ph)PPSTTVGSHS(ph)PPETPVLTR ddPTM_KYSE-520_SHP099_60min_R1 1 TPPSTTVGSHSPPETPVLTR 20 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 2 T(0.994)PPS(0.086)T(0.076)T(0.067)VGS(0.048)HS(0.729)PPETPVLTR 76.161 0.0031781999999999995 0.0 44887.0 51777.0 46614.0 62518.0 48465.0 59303.0 43673.0 46401.0 50378.0 49624.0 True False 42397.02862998391 49289.55520113853 49618.81302503704 68459.69192327787 52278.91977187101 58932.86797966905 48087.89304740559 46240.04576107484 41230.625126033025 49184.36996688777 0.8620020681067324 1.002138590660439 1.008832949541526 1.3918993365039904 1.0629173415673836 1.1982031694081723 0.977706801566832 0.9401369945819145 0.8382871459732143 1.0 15.585912301744017 -6.955212057871624 7.127355853663857 0.9248538002150936 1.0930185580565654 0.23005803464068042 0.13543282496423772 0.3114881244353718 39.320471533077914 0.06053437917483294 0.04043078016880725 1.1086333581507197e-07 6.955212057871624 0.1681647578414719 T(ph)PPTANHPVEPVTSVTQPSELLQQK ddPTM_KYSE-520_SHP099_60min_R1 3 TPPTANHPVEPVTSVTQPSELLQQK 25 0 O95487-2;O95487;O95487-3 O95487-2 SEC24B Protein transport protein Sec24B 1 T(0.86)PPT(0.14)ANHPVEPVTSVTQPSELLQQK;T(0.975)PPT(0.025)ANHPVEPVTSVTQPSELLQQK;T(0.982)PPT(0.018)ANHPVEPVTSVTQPSELLQQK 210.7 5.8086000000000005e-21 2448320000.0 1323970.0 1319030.0 1102750.0 1097210.0 1076020.0 1372410.0 1012440.0 1182650.0 1429520.0 1362480.0 True False 1250526.7448312396 1255661.8188956042 1173835.0294623831 1201488.508511785 1160696.6522836802 1363844.2801203576 1114787.3156622015 1178547.6631825855 1169955.203266639 1350409.487193399 0.9260352187174358 0.9298378238628106 0.8692437668680805 0.8897216140038222 0.859514586716948 1.0099486807922835 0.8255179826817575 0.8727335481269465 0.866370693009715 1.0 20.36496551405566 T(ph)PPVVIK ddPTM_KYSE-520_SHP099_60min_R1 1 TPPVVIK 7 0 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 T(1)PPVVIK 90.65700000000001 0.034691 28088000000.0 45923000.0 35513000.0 34973000.0 33662000.0 34721000.0 38862000.0 32940000.0 36858000.0 38432000.0 37920000.0 True False 43375559.64476913 33806902.17390027 37227415.5387785 36861226.359150656 37453345.16453387 38619447.842873015 36269896.66342 36730148.20072188 31453717.591879427 37584058.30131359 1.1540946242958847 0.8995011103608973 0.9905107969002214 0.9807675920368166 0.9965221122282276 1.027548636000366 0.9650340677061036 0.9772799921246966 0.8368898680316303 1.0 25.163617520619972 -7.544220882159063 24.920192221701022 0.9146581844947418 0.9956821916248018 0.1750631959774046 0.07062655845003259 380.8606168854075 444703.8573646475 0.044109282654238115 0.016674904976711678 2.8561375424489837e-08 7.544220882159063 0.08102400713005997 T(ph)PQASTYSYETSDLCYTAEKK ddPTM_KYSE-520_SHP099_60min_R1 1 TPQASTYSYETSDLCYTAEKK 21 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(1)PQASTYSYETSDLCYTAEKK 104.63 0.0012069000000000001 326400000.0 171630.0 189730.0 131740.0 140710.0 109830.0 136350.0 146590.0 126470.0 188310.0 135930.0 True False 162109.34176407734 180615.08600946408 140232.1711914528 154083.036093996 118472.99615278232 135498.98907353566 161408.74778053243 126031.30508831984 154117.65090879519 134725.7659519399 1.2032541854087946 1.3406127976581264 1.0408712112386667 1.1436790505905259 0.8793640571696185 1.0057392371543212 1.1980540369546762 0.9354654931654159 1.1439359785400878 1.0 17.039666263294173 -4.771842356320121 24.99603297057585 1.0429867192338265 1.2719334863853666 0.4669995036341231 0.09766380312534476 150.78642142222043 362308.5444068561 0.024856214420640572 0.05263623810900077 1.69105465277464e-05 4.771842356320121 0.22894676715154016 T(ph)PQEYAEGSVEETKEEPTEIK ddPTM_KYSE-520_SHP099_60min_R1 1 TPQEYAEGSVEETKEEPTEIK 21 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 T(1)PQEYAEGSVEETKEEPTEIK 114.83 0.00033918 169020000.0 143490.0 145200.0 120090.0 125060.0 120820.0 116240.0 141180.0 136310.0 145190.0 128830.0 True False 135530.3236597766 138224.37405035654 127831.19355079385 136945.66479933992 130327.84662823584 115514.50304296128 155451.8521840202 135837.1724249933 118827.15594205263 127688.66642822344 1.0614123199098575 1.0825109065420104 1.001116208090798 1.0724966328653769 1.0206688680666576 0.9046574474790563 1.217428739232726 1.0638154209351878 0.930600649736192 1.0 16.962270952387208 -7.244379257294598 0.006280374352673241 7.90253887005316e-08 2.064988019176157 0.04140601235196284 0.08129069991213088 12379.659364432096 74.27956434408092 12175.384889193454 12240.093481455491 5.69666581017949e-08 7.244379257294598 2.0649879401507683 T(ph)PRTPQLK ddPTM_KYSE-520_SHP099_60min_R1 1 TPRTPQLK 8 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 T(0.993)PRT(0.007)PQLK 76.22800000000001 0.050399 1075100000.0 692650.0 828410.0 797860.0 434890.0 473870.0 618630.0 390110.0 461170.0 917820.0 546930.0 True False 654227.323736457 788611.9401312402 849291.3322211364 476221.814845554 511160.87304851954 614768.9007008531 429546.1259067023 459570.3089078871 751167.0243593552 542084.6257051007 1.206873046593952 1.4547764366227436 1.566713557161754 0.8785008691698688 0.9429540127312078 1.134082893240535 0.79239680584555 0.8477833296048831 1.3857006613723766 1.0 19.048158565046997 -5.265132562383954 24.999015280276463 0.9858946920836499 1.4139865623804304 0.5265664167562418 0.1788246214682951 237.3993940607757 1606949.4095686995 0.049724733261084314 0.07709955278523395 5.430845371468431e-06 5.265132562383954 0.42809187029678053 T(ph)PRTPRT(ph)PQLK ddPTM_KYSE-520_SHP099_60min_R1 2 TPRTPRTPQLK 11 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 2 T(0.86)PRT(0.149)PRT(0.991)PQLK;T(0.845)PRT(0.155)PRT(1)PQLK 134.14 0.00021655 595350000.0 825290.0 835360.0 1039780.0 532940.0 720190.0 675050.0 596860.0 601400.0 1362410.0 707510.0 True False 779509.5185251731 795228.0516990775 1106805.8825068218 583590.4573657458 776864.8556794345 670836.7625529165 657196.4335922541 599313.883767815 1115030.68756121 701242.011834451 1.1116126891570202 1.1340279650655254 1.5783507887831971 0.8322240360914367 1.1078412909790643 0.9566408618302913 0.9371891907517441 0.8546462899449053 1.590079699652174 1.0 19.41955290585883 -5.281595452867675 24.99376353950005 1.028840923514626 1.2606003227143516 0.1737921229502165 0.2332080646911601 1378.1066190377126 1708865.2261435369 0.06430650559075136 0.0955141333265586 5.228830299532993e-06 5.281595452867675 0.23175939919972555 T(ph)PS(ph)DDEEDNLFAPPK ddPTM_KYSE-520_SHP099_60min_R1 4 TPSDDEEDNLFAPPK 15 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 2 T(1)PS(1)DDEEDNLFAPPK;T(1)PS(1)DDEEDNLFAPPK;T(1)PS(1)DDEEDNLFAPPK;T(1)PS(1)DDEEDNLFAPPK 228.99 4.2087e-15 274453000.0 523305.0 490182.0 468575.0 452856.0 448783.0 476978.0 447753.0 501151.0 536250.0 464338.0 True False 494276.2284673457 466632.9209418175 498780.09424650756 495895.298083879 484099.66887402406 474001.003375994 493016.2428881685 499412.6241505222 438880.51776242047 460224.326569498 1.0739897913516867 1.0139249361720817 1.08377603149404 1.077507792298316 1.0518776190787054 1.029934699256745 1.0712520273821697 1.0851504262565452 0.9536230321283236 1.0 18.811977718089235 -7.7623947260829445 24.999999989419646 0.9768114953156676 1.0596837714102298 0.6533283519044465 0.02449572333109183 15.262119103061925 399285.710349972 0.019487020375057423 0.006146952767202896 1.7282448600105766e-08 7.7623947260829445 0.08287227609456227 T(ph)PS(ph)PESHR ddPTM_KYSE-520_SHP099_60min_R1 4 TPSPESHR 8 0 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 2 T(1)PS(0.587)PES(0.414)HR;T(1)PS(1)PESHR;T(1)PS(0.97)PES(0.03)HR;T(1)PS(0.902)PES(0.098)HR 128.86 0.0019156 4425830000.0 2773350.0 2565690.0 2526140.0 2550060.0 2489050.0 2352530.0 2263770.0 2684970.0 2989550.0 2459560.0 True False 2619506.7469638414 2442430.401220794 2688979.0263669095 2792416.935696507 2684924.074242761 2337846.987643304 2492613.9638661263 2675656.4657467064 2446723.080422643 2437770.211908726 1.0745503141220267 1.001911660618914 1.1030486028711837 1.1454799644590372 1.1013852171655336 0.9590104006615192 1.022497506815648 1.09758354281133 1.0036725645715834 1.0 21.21713071096574 -6.2261215721463525 24.99562223788177 1.0230232855991328 1.084975979118793 0.34697186819378967 0.04671902751300313 855.5655927362591 605512.9407583593 0.01670796424729811 0.016707186715184407 5.941258215681408e-07 6.2261215721463525 0.06195269351966015 T(ph)PS(ph)PESHRS(ph)PAEGSER ddPTM_KYSE-520_SHP099_60min_R1 2 TPSPESHRSPAEGSER 16 1 Q66K74-2;Q66K74 Q66K74-2 MAP1S Microtubule-associated protein 1S;MAP1S heavy chain;MAP1S light chain 3 T(1)PS(0.949)PES(0.1)HRS(0.949)PAEGS(0.002)ER;T(1)PS(0.992)PES(0.271)HRS(0.734)PAEGS(0.002)ER 122.3 0.00069799 515200000.0 253560.0 243330.0 231011.0 275230.0 244880.0 255600.0 229984.0 270600.0 315420.0 247880.0 True False 239494.5213406714 231640.0615542238 245902.3386906689 301387.7764490831 264150.6628233938 254004.70558999432 253233.0271475403 269661.35175851505 258147.67909113757 245683.97604772158 0.9748072511418167 0.9428374828532982 1.0008887948105534 1.22672948108973 1.0751643923740688 1.0338676118651569 1.0307266726192692 1.0975943815975044 1.0507306306415158 1.0 17.906444240031234 -5.011935980156311 24.645103491824937 1.0772850332272852 0.9620825204114855 0.3965919698683582 0.05832132205855237 449.5070404722562 928137.838384076 0.01587539127373356 0.029604815010358963 9.728906281213887e-06 5.011935980156311 -0.11520251281579974 T(ph)PS(ph)PPPPIPEDIALGK ddPTM_KYSE-520_SHP099_60min_R1 14 TPSPPPPIPEDIALGK 16 0 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK;T(1)PS(1)PPPPIPEDIALGK 172.57 7.2129e-08 19617806000.0 7392958.0 6275922.0 6119067.0 6320903.0 6829061.0 6442630.0 6628291.0 7129560.0 7535596.0 6678680.0 True False 6982855.882243612 5974417.286769029 6513511.849673361 6921639.720671213 7366469.24865806 6402419.156397746 7298343.340166262 7104829.220411812 6167321.723316408 6619512.091134414 1.0548898145523184 0.9025464723858775 0.9839866987171123 1.0456419786499735 1.112841724169377 0.9672040881944421 1.1025500429164583 1.0733161481685922 0.9316882631842867 1.0 22.658293452573933 -5.202619798924887 5.306142390087044 1.0398128273180618 0.9713383224343031 0.11707794650831671 0.06384432061751255 0.36193682183957665 21.602642581337907 0.01695383649210189 0.029656117306170002 6.271626710424936e-06 5.202619798924887 -0.06847450488375872 T(ph)PS(ph)PPPPIPEDIALGKK ddPTM_KYSE-520_SHP099_60min_R1 7 TPSPPPPIPEDIALGKK 17 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 T(1)PS(1)PPPPIPEDIALGKK;T(1)PS(1)PPPPIPEDIALGKK;T(1)PS(1)PPPPIPEDIALGKK;T(1)PS(1)PPPPIPEDIALGKK;T(1)PS(1)PPPPIPEDIALGKK;T(1)PS(1)PPPPIPEDIALGKK;T(1)PS(1)PPPPIPEDIALGKK 120.75 0.00011356 13516210000.0 10698550.0 10435350.0 10147560.0 7915760.0 8272430.0 8344490.0 6776040.0 6819470.0 11893960.0 8014350.0 True False 10105080.104469325 9934020.1222203 10801687.954270063 8668071.450439967 8923423.177311856 8292408.942678591 7461028.250977541 6795814.850246262 9734316.686331974 7943349.094069949 1.2721435234431786 1.2506085285407476 1.3598405189486116 1.0912363724403167 1.1233829801051516 1.0439436621096296 0.9392799136257928 0.8555352118818029 1.2254675667721893 1.0 22.921315977533965 -5.6540295916724155 1.3511995613092198 1.0005221997111367 1.292376224086853 0.5784352548071878 0.09896553933258874 0.2960410783504322 1.122194715680019 0.036919172338807815 0.057943662129008 2.218045282937281e-06 5.6540295916724155 0.2918540243757164 T(ph)PS(ph)SEEISPTKFPGLYR ddPTM_KYSE-520_SHP099_60min_R1 1 TPSSEEISPTKFPGLYR 17 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 2 T(0.992)PS(0.946)S(0.061)EEISPTKFPGLYR 56.528999999999996 0.042046 442420000.0 204260.0 194250.0 202750.0 224450.0 213560.0 214160.0 201610.0 216940.0 285310.0 227460.0 True False 192929.29061778513 184917.93842480573 215819.58941146967 245781.6605166471 230365.95700981695 212823.34800138135 221990.706323986 216187.48577417663 233504.89607980603 225444.88136120205 0.8557714393554082 0.820235692681507 0.9573053427001034 1.0902073226619946 1.0218282873352555 0.9440149925622007 0.9846784055758541 0.9589372110329999 1.035751597773872 1.0 17.782415228951425 -4.870193843975013 4.496558940915219 1.0020968707989497 0.8386110649883051 0.7319047684787048 0.039742101012945605 0.10702645725828998 3.678102950129407 0.011191974742674098 0.025076027555942855 1.3483609178183542e-05 4.870193843975013 -0.16348580581064465 T(ph)PSEADRWLEEVSK ddPTM_KYSE-520_SHP099_60min_R1 3 TPSEADRWLEEVSK 14 1 G3V3Z8;P49757-3;P49757;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5;P49757-4;P49757-2 G3V3Z8 NUMB Protein numb homolog 1 T(0.978)PS(0.022)EADRWLEEVSK;T(0.988)PS(0.012)EADRWLEEVSK;T(1)PSEADRWLEEVSK 157.51 1.0895000000000001e-06 427375000.0 366762.0 349069.0 351520.0 319461.0 331530.0 308082.0 258812.0 284708.0 483713.0 321105.0 True False 346416.98073807923 332299.2012767491 374179.54165188584 349822.4773905483 357619.5248523344 306159.14596078475 284975.24272170773 283720.414399347 395882.9126124265 318260.2595159095 1.0884707417287902 1.0441115135838623 1.1757029992404096 1.0991710932513112 1.1236700598318259 0.9619773025588204 0.8954157303685041 0.8914729562242568 1.2438967818809208 1.0 18.279847496384818 -6.259733121147368 24.93706529233305 0.9853235601373825 1.1062424936547173 0.23044480433884296 0.09688472209186413 211.29580700737586 3088112.8373504207 0.03293778479387333 0.031306923007001074 5.498786766978701e-07 6.259733121147368 0.12091893351733474 T(ph)PSFELPDASERPPTYCELVPR ddPTM_KYSE-520_SHP099_60min_R1 2 TPSFELPDASERPPTYCELVPR 22 1 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 T(0.59)PS(0.41)FELPDASERPPTYCELVPR;T(0.5)PS(0.5)FELPDASERPPTYCELVPR 174.98 2.095e-09 5057780000.0 24357.0 19846.0 18055.0 15880.0 18499.0 28769.0 21215.0 57709.0 53523.0 20512.0 True False 23005.86865552427 18892.568370546676 19218.854189021396 17389.230425503913 19954.766055088036 28589.44199968129 23359.619238447325 57508.82094838188 43804.57240503125 20330.279638094526 1.1316061099531691 0.9292822679696993 0.9453315218059982 0.8553365096326699 0.9815293449135417 1.4062493240924678 1.1490062927947373 2.828727492789762 2.15464682162812 1.0 14.311342438791005 -7.131691325200294 7.295097707868175 2.115163717579895 1.0420769125312523 0.4803964806537254 0.44245862114992346 0.1878667762369648 10.237207286121254 0.2006939981147619 0.1154352115097998 7.384288819811099e-08 7.131691325200294 -1.0730868050486426 T(ph)PSFLKK ddPTM_KYSE-520_SHP099_60min_R1 1 TPSFLKK 7 1 P35612;P35611;P35611-3;Q9UEY8-2;Q9UEY8 P35612;P35611;Q9UEY8-2 ADD2;ADD1;ADD3 Beta-adducin;Alpha-adducin;Gamma-adducin 1 T(0.586)PS(0.414)FLKK 80.455 0.017157 34690000000.0 30259000.0 26658000.0 25456000.0 27630000.0 28008000.0 25721000.0 26434000.0 28559000.0 30361000.0 27496000.0 True False 28580472.95017899 25377309.66552624 27096934.491040077 30255946.89273759 30212070.25627899 25560465.698279493 29106206.69097885 28459935.494720675 24848207.738526523 27252406.83156431 1.048732067109628 0.9311951719483986 0.9942950968886842 1.1102119192531104 1.1086019096591035 0.937915900648996 1.0680233445387814 1.0443090649064353 0.911780302272121 1.0 24.69988031320665 -9.702796958923862 12.038326142209073 0.9999999830961167 1.0194043089450378 0.004788260689947754 0.0683235104720691 0.0 0.0 0.06723338264354173 0.016306490482758337 1.9824536446317149e-10 9.702796958923862 0.019404325848921045 T(ph)PSIDLQR ddPTM_KYSE-520_SHP099_60min_R1 1 TPSIDLQR 8 0 A0A0U1RR27;Q7Z401;Q7Z401-2 A0A0U1RR27 DENND4A C-myc promoter-binding protein 1 T(0.57)PS(0.43)IDLQR 116.12 0.004753 758770000.0 546560.0 607710.0 497540.0 462800.0 533150.0 648920.0 467150.0 602510.0 662220.0 620240.0 True False 516241.227259652 578514.6994086932 529612.2244921464 506784.37285410624 575105.8717914582 644869.8495753477 514374.08094464656 600420.0334368909 541977.5412077014 614745.1561394178 0.8397646115695035 0.9410642664380623 0.8615150834503459 0.8243812379697268 0.9355191595214948 1.0490035474620283 0.8367273427169418 0.9766974614448559 0.8816296245606962 1.0 19.22962893664341 -5.893155093477613 8.055168549008567 0.9459888547615617 0.8718842395752293 0.28332648829900287 0.06224445621121085 0.3505642397530874 24.03481538728627 0.018891069846695682 0.021455965021419263 1.2789244982849936e-06 5.893155093477613 -0.07410461518633238 T(ph)PSKQPGSIGSR ddPTM_KYSE-520_SHP099_60min_R1 1 TPSKQPGSIGSR 12 1 Q66K14;Q66K14-2 Q66K14 TBC1D9B TBC1 domain family member 9B 1 T(0.984)PS(0.016)KQPGSIGSR 117.48 0.00038783 455590000.0 599440.0 449870.0 435500.0 446900.0 452440.0 431750.0 468520.0 509030.0 541160.0 483970.0 True False 566187.868245985 428257.56993136316 463573.02682463644 489373.24163461535 488044.4539685409 429055.28810046875 515882.5739145572 507264.2937384955 442898.98553344765 479682.402322962 1.1803390441344153 0.8927939983986001 0.9664165801782334 1.0202026158656716 1.0174324753317694 0.894457011603259 1.0754669577543148 1.0575003195488566 0.923317143569614 1.0 18.87171998809111 -7.772047925897328 24.998227533906217 0.961658618312166 1.0060198916604624 0.053367411008260035 0.0824418790618172 874.4555255489495 2060517.5025428755 0.07369289954527018 0.01981787554819257 1.690254395935634e-08 7.772047925897328 0.044361273348296315 T(ph)PSNELYKPLR ddPTM_KYSE-520_SHP099_60min_R1 4 TPSNELYKPLR 11 1 Q8WUM4;Q8WUM4-2 Q8WUM4 PDCD6IP Programmed cell death 6-interacting protein 1 T(0.997)PS(0.003)NELYKPLR;T(0.99)PS(0.01)NELYKPLR;T(0.996)PS(0.004)NELYKPLR;T(0.997)PS(0.003)NELYKPLR 112.02 0.00079719 2304790000.0 1737120.0 1423940.0 1448160.0 1564870.0 1401570.0 1608460.0 1471030.0 1520810.0 1714080.0 1595000.0 True False 1640758.4907371323 1355531.7850224841 1541510.7107379246 1713594.7743046773 1511865.585157561 1598421.0045120567 1619736.0682692972 1515534.6650697214 1402846.2804404818 1580869.5408912236 1.0378835497153964 0.8574596131811711 0.9751030498499514 1.0839571071365124 0.9563506323900952 1.0111024111521172 1.0245855374986619 0.9586715575627643 0.8873890249347329 1.0 20.592286885486583 -4.986564737799684 24.99940293873225 0.9913822815353726 0.9398240223062903 0.059120391953118356 0.06296592352585886 543.7709609146233 1011797.2254653259 0.01623942541032091 0.03377691486452864 1.0314193201885483e-05 4.986564737799684 -0.051558259229082304 T(ph)PSNTPSAEADWS(ph)PGLELHPDYK ddPTM_KYSE-520_SHP099_60min_R1 7 TPSNTPSAEADWSPGLELHPDYK 23 0 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3;A0A2R8Y7R5;A0A2R8Y755;A0A2R8Y586;A0A2R8YF51;A0A2R8Y5D2;A0A2R8YCS7 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 2 T(0.98)PS(0.019)NT(0.001)PS(0.001)AEADWS(0.999)PGLELHPDYK;T(0.551)PS(0.252)NT(0.178)PS(0.023)AEADWS(0.996)PGLELHPDYK;T(0.998)PS(0.002)NTPSAEADWS(1)PGLELHPDYK;T(0.999)PS(0.001)NTPSAEADWS(1)PGLELHPDYK;T(0.999)PS(0.001)NTPSAEADWS(1)PGLELHPDYK;T(0.999)PS(0.001)NTPSAEADWS(1)PGLELHPDYK;T(0.997)PS(0.003)NTPSAEADWS(1)PGLELHPDYK 244.1 2.6036e-28 2228540000.0 2005986.0 1754688.0 1510445.0 1926831.0 1727570.0 1877481.0 1789780.0 2030122.0 1990070.0 2018410.0 True False 1894709.9577460478 1670390.1546396152 1607810.7014974481 2109956.4389171335 1863519.9304712913 1865762.9446627854 1970708.428969512 2023079.9806160377 1628723.4535822112 2000528.4576992188 0.9471047264806863 0.8349744529806433 0.8036929918740421 1.0546995374131125 0.9315138324073134 0.9326350432468102 0.9850939242503941 1.0112727828639614 0.8141466057700496 1.0 20.931949720621798 -5.247383793072162 24.99098371295764 0.9603583687007482 0.8592291008364294 0.3013576548637068 0.06931738078106664 974.3062429068824 1732323.751795831 0.018330298594916774 0.03155073461222781 5.657391152400261e-06 5.247383793072162 -0.10112926786431875 T(ph)PSNTPSAEADWSPGLELHPDYK ddPTM_KYSE-520_SHP099_60min_R1 2 TPSNTPSAEADWSPGLELHPDYK 23 0 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3;A0A2R8Y7R5;A0A2R8Y755;A0A2R8Y586;A0A2R8YF51;A0A2R8Y5D2;A0A2R8YCS7 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 T(0.867)PS(0.127)NT(0.006)PSAEADWSPGLELHPDYK;T(0.696)PS(0.046)NT(0.193)PS(0.065)AEADWSPGLELHPDYK 179.49 5.981e-11 1445640000.0 560688.0 422275.0 422618.0 415351.0 430577.0 484823.0 507252.0 489951.0 551527.0 464815.0 True False 529585.5189361818 401988.2751523031 449860.6324927085 454825.8341601681 464460.9602519942 481797.0398210396 558529.9824624497 488251.47433642275 451383.5996642503 460697.1007205976 1.1495308264537212 0.8725652376008763 0.9764781063068569 0.9872556902328102 1.0081699223318519 1.0458000258031548 1.212358362118683 1.0598101736970476 0.9797838947938251 1.0 18.813458993175164 -6.27192218886981 3.510811623815165 1.0744109825284174 0.9884070547202521 0.10059692770403295 0.08590422290968519 0.43687195806880785 11.621785680405987 0.030982080029272666 0.02864610327278535 5.346601441355435e-07 6.27192218886981 -0.08600392780816524 T(ph)PSPAAEDAREPEAK ddPTM_KYSE-520_SHP099_60min_R1 1 TPSPAAEDAREPEAK 15 1 Q92797 Q92797 SYMPK Symplekin 1 T(0.815)PS(0.185)PAAEDAREPEAK 222.45 7.085499999999999e-14 609660000.0 326460.0 319600.0 260600.0 246550.0 302510.0 268510.0 245160.0 259460.0 315060.0 276740.0 True False 308350.61301812436 304245.93627061986 277398.6929747423 269982.0378720393 326315.8159535474 266834.1294912727 269943.1653310273 258559.99381841937 257853.04601627646 274288.2989004618 1.1241843500222504 1.1092195237283147 1.011339871539359 0.9843002379405721 1.1896818685363104 0.9728235967809395 0.9841585164702511 0.9426577613952457 0.9400803718202007 1.0 18.065333552771946 -6.479258902112662 24.854619014234828 0.9643092340961421 1.0761771716498625 0.5122979423867299 0.05625717525249687 383.20837928502124 218352.5905205774 0.02034339275783561 0.017940042710487724 3.316966595788395e-07 6.479258902112662 0.11186793755372038 T(ph)PSPEPVDKDFYSEFGNK ddPTM_KYSE-520_SHP099_60min_R1 2 TPSPEPVDKDFYSEFGNK 18 1 Q9Y2I1-2;Q9Y2I1 Q9Y2I1-2 NISCH Nischarin 1 T(0.5)PS(0.5)PEPVDKDFYSEFGNK;T(0.62)PS(0.38)PEPVDKDFYSEFGNK 164.98 6.5294e-08 3651550000.0 3394800.0 3012750.0 2454180.0 2475270.0 2615620.0 2732600.0 2468560.0 2441210.0 3155510.0 2820300.0 True False 3206483.676633978 2868012.967770052 2612380.3696268364 2710518.916582935 2821454.413157972 2715544.8297934975 2718106.135623921 2432742.0122926957 2582548.927933789 2795314.336160196 1.147092344912661 1.0260073189871444 0.9345569247197264 0.9696651576960963 1.009351390882817 0.9714631355283376 0.9723794209697603 0.870292825684302 0.9238849794192828 1.0 21.41457909415319 -4.366979619356747 2.4225397986595363 0.9552476484697032 1.1691255054216023 0.6990551388541341 0.038292781789410694 0.2509047518533581 2.1233899915622945 0.010968785727138107 0.10103639424969442 4.2955658459432335e-05 4.366979619356747 0.2138778569518991 T(ph)PSSEEIS(ph)PTKFPGLYR ddPTM_KYSE-520_SHP099_60min_R1 2 TPSSEEISPTKFPGLYR 17 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 2 T(0.807)PS(0.193)SEEIS(0.997)PT(0.003)KFPGLYR;T(0.964)PS(0.035)SEEIS(0.995)PT(0.005)KFPGLYR 262.8 1.4107999999999999e-29 1608340000.0 3200990.0 2946180.0 2672620.0 3028440.0 2899690.0 2868720.0 2721650.0 3027110.0 3603210.0 2979980.0 True False 3023424.7036846364 2804641.0904936614 2844901.361543198 3316262.0270663113 3127879.106020771 2850815.2543823454 2996780.9427442933 3016609.6619427823 2948957.8935323628 2953579.6955893585 1.023647578631306 0.949573527567883 0.9632045364448937 1.1227941578886644 1.0590129362995342 0.965206816203242 1.0146267416516468 1.0213401948989382 0.9984351862711213 1.0 21.49403310963433 T(ph)PSSEEISPTKFPGLYR ddPTM_KYSE-520_SHP099_60min_R1 1 TPSSEEISPTKFPGLYR 17 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 T(0.593)PS(0.404)S(0.003)EEISPTKFPGLYR 159.75 1.3414e-07 1189800000.0 994380.0 963410.0 939430.0 621610.0 892430.0 889420.0 750550.0 673020.0 1211400.0 839550.0 True False 939219.7591526152 917126.3374921072 999987.1609411456 680687.6275061383 962659.1637678896 883868.7998664036 826422.9186621095 670685.450704049 991440.2969088968 832112.2401600166 1.1287176342604954 1.1021666227572162 1.2017455250373994 0.8180238129597047 1.1568861955242584 1.062199012595265 0.993162795566121 0.8060035874187779 1.1914742375598768 1.0 19.666418615063797 -5.206999533854709 24.999995362545334 1.0042284029522068 1.1400056095853153 0.22609009938164848 0.1188287367800828 483.43463274668636 222003.0687711606 0.031325113395605994 0.054256656392889735 6.208697006334932e-06 5.206999533854709 0.13577720663310844 T(ph)PSSPSKSPASFEIPASAMEANGVDGDGLNKPAK ddPTM_KYSE-520_SHP099_60min_R1 1 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAK 34 2 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3;H0Y911;Q4VXL4;O95359-2;H0YA73 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.635)PS(0.117)S(0.117)PS(0.117)KS(0.006)PAS(0.006)FEIPASAMEANGVDGDGLNKPAK 54.115 0.040444 204650000.0 387590.0 428270.0 352230.0 299110.0 317560.0 446580.0 332460.0 363190.0 511930.0 446390.0 True False 366089.6100584906 407695.26635362435 374935.3093879261 327537.32446929923 342550.165330761 443792.72856956057 366068.30129692174 361930.1786591835 418976.41670511116 442435.33188616455 0.8274420772360079 0.9214799021939808 0.8474352800657301 0.7403055336312342 0.7742378165650132 1.0030680114935877 0.8273939148040476 0.8180408583469675 0.9469777536051547 1.0 18.755107074976884 -6.234141524565784 24.972965397936402 0.9019923141530026 0.8245512584411305 0.28933477557652587 0.07349439083445972 1256.725395333745 1149694.1750600885 0.025428100507855527 0.02542290072342286 5.832550066187973e-07 6.234141524565784 -0.0774410557118721 T(ph)PSSQNLLALLAR ddPTM_KYSE-520_SHP099_60min_R1 1 TPSSQNLLALLAR 13 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 T(0.728)PS(0.271)S(0.002)QNLLALLAR 104.09 0.0041782 84497000.0 69732.0 76983.0 82643.0 64776.0 61759.0 74431.0 66163.0 80507.0 115260.0 74581.0 True False 65863.82695270426 73284.62112616118 87970.30001347534 70932.29156438544 66619.08193935797 73966.44852022242 72851.40172865377 80227.74000747497 94331.68946815215 73920.27036313993 0.8910117161252566 0.9914008805182114 1.1900700522510723 0.959578356733873 0.9012288728394225 1.0006247022211314 0.9855402499309696 1.0853280110225387 1.2761274952694206 1.0 16.173682412965324 -7.431157336748857 4.266749407856711 1.1501082364623212 0.9930175107990783 0.276715487188977 0.09892965373499786 0.2806325741637785 8.889577319805593 0.060831790633644425 0.02651332915623372 3.705464554289715e-08 7.431157336748857 -0.1570907256632429 T(ph)PT(ph)LAALLCLGLS(ph)LGPR ddPTM_KYSE-520_SHP099_60min_R1 1 TPTLAALLCLGLSLGPR 17 0 A0A0G2JLX9;A0A0G2JPW2;B5ME96;A0A0G2JQ26;A0A0G2JPY1;A0A0G2JPA2;A0A0G2JQ24;A0A0G2JQ25;A0A0G2JPW1;A0A0G2JPR9 A0A0G2JLX9 LILRA6 3 T(1)PT(1)LAALLCLGLS(1)LGPR 69.721 0.05369500000000001 0.0 581940.0 572050.0 493890.0 566270.0 590920.0 659540.0 534930.0 724970.0 934660.0 739550.0 True False 549658.6281313704 544567.8593354443 525726.9396519401 620088.1305447158 637422.042125121 655423.566216059 589005.9448136986 722455.2482792708 764949.3048612106 732998.1623611929 0.7498772252863031 0.7429320935556487 0.7172281823441767 0.8459613712362359 0.8696093317230232 0.8941680891869574 0.8035571916256177 0.9856167250843298 1.043589662485775 1.0 19.48345005593953 -6.423480958099547 0.4508720187750279 1.0315804918125893 0.7099143843514802 0.787405315851299 0.05043865768905431 0.5575524035820469 0.2434661401269237 0.053401582003447114 0.06905314075466192 3.7715428120316607e-07 6.423480958099547 -0.321666107461109 T(ph)PT(ph)PDLS(ph)DPFLS(ph)FK ddPTM_KYSE-520_SHP099_60min_R1 1 TPTPDLSDPFLSFK 14 0 A8K5M9 A8K5M9 C15orf62 Uncharacterized protein C15orf62, mitochondrial 4 T(1)PT(1)PDLS(1)DPFLS(1)FK 78.32600000000001 0.031143 0.0 391130.0 316250.0 369470.0 1831800.0 228340.0 176560.0 727360.0 591040.0 699410.0 212850.0 True False 369433.2392016754 301056.8752990722 393286.62737290154 2005893.7212492498 246309.0589231205 175458.02354839354 800888.6471495179 588989.8201897731 572414.7746913082 210964.31459479412 1.7511645981987882 1.4270511857767116 1.8642329539396256 9.508213391928553 1.1675389716797087 0.8316952745558004 3.7963228458225755 2.7918931280916612 2.7133251222642247 1.0 17.686639456728695 -8.480938847299239 1.741810313757525 1.0000772835321405 2.9341944595179834 0.05332800787254188 2.3734962026297324 11.481709832451916 37.441442860495705 2.352076087909885 0.6630202684787285 3.3041606341500905e-09 8.480938847299239 1.9341171759858429 T(ph)PT(ph)PPPR ddPTM_KYSE-520_SHP099_60min_R1 1 TPTPPPR 7 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 T(1)PT(1)PPPR 100.25 0.018207 3256500000.0 3000800.0 2607400.0 2650900.0 2546000.0 2594800.0 2814600.0 2563400.0 2472600.0 2979900.0 2694400.0 True False 2834339.6420535035 2482136.590212808 2821781.2555899667 2787971.0745171863 2798995.99760757 2797033.0373771386 2822533.4883731254 2464023.1277091773 2438825.277165943 2670529.7122114794 1.0613398641823657 0.9294547740333275 1.0566372816175242 1.0439768042155402 1.0481051698502568 1.0473701245813518 1.056918960858807 0.9226720513319835 0.913236526077195 1.0 21.348694505013384 -7.2644524782879145 24.972128844759634 0.9384657111399166 1.0329597351049604 0.4823800330212644 0.0422897399886629 219.51830698361363 1819313.9455344828 0.02194367717261061 0.011261611364290712 5.439356474180209e-08 7.2644524782879145 0.0944940239650438 T(ph)PTAPAVNLAGAR ddPTM_KYSE-520_SHP099_60min_R1 6 TPTAPAVNLAGAR 13 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.993)PT(0.007)APAVNLAGAR;T(0.999)PT(0.001)APAVNLAGAR;T(0.991)PT(0.009)APAVNLAGAR;T(0.992)PT(0.008)APAVNLAGAR;T(0.999)PT(0.001)APAVNLAGAR;T(0.998)PT(0.002)APAVNLAGAR 174.39 2.1364e-06 7755530000.0 984665.0 795882.0 817016.0 694440.0 690056.0 750903.0 748688.0 859478.0 1016784.0 829605.0 True False 930043.6695689859 757646.6340767626 869682.1586318206 760439.3688090002 744359.4813184399 746216.3358436757 824372.6895307393 856496.6714216737 832161.656638777 822255.345122923 1.1310886272559884 0.9214250032798489 1.0576789360995975 0.9248214357248337 0.9052656036029318 0.9075238492151365 1.0025750448694253 1.0416431787301204 1.012047731370324 1.0 19.649226955858413 -9.88303183215603 12.499891400339783 1.0 0.9845041553519562 0.0 0.07137040817153772 0.0 0.0 0.0695659946920162 0.016872232003902376 1.3090859683931626e-10 9.88303183215603 -0.015495844648043766 T(ph)PTSPLK ddPTM_KYSE-520_SHP099_60min_R1 1 TPTSPLK 7 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 T(0.46)PT(0.27)S(0.27)PLK 84.743 0.042164 2611600000.0 9330400.0 9718000.0 8049100.0 6100300.0 6918900.0 8909900.0 7123700.0 8912000.0 9931200.0 10625000.0 True False 8812824.112308733 9251132.692984615 8567957.865015356 6680070.677877934 7463378.06684408 8854290.00914041 7843833.116612162 8881086.352076435 8127944.425178829 10530870.766124908 0.8368561639420468 0.8784774686195105 0.8136039322195714 0.6343322243936367 0.7087142395529 0.8407937202707276 0.7448418360468109 0.8433382717642492 0.7718207359760151 1.0 23.32812139763414 -10.17326758805173 11.002748427619489 0.9999996212266612 0.7847775496424877 0.45674710601071944 0.07005151678255232 3.2255310554927813e-10 0.0 0.07340410178370751 0.01780310970634211 6.710152833152663e-11 10.17326758805173 -0.2152220715841735 T(ph)PVKPSSVEEEDSFFR ddPTM_KYSE-520_SHP099_60min_R1 2 TPVKPSSVEEEDSFFR 16 1 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 T(1)PVKPSSVEEEDSFFR;T(1)PVKPSSVEEEDSFFR 166.91 1.3003e-07 1135810000.0 938110.0 728450.0 731150.0 854060.0 770590.0 899850.0 889350.0 868280.0 916700.0 899500.0 True False 886071.1682240774 693454.1685742586 778281.0988813622 935229.605617498 831231.0489426608 894233.7023675909 979254.1772195684 865268.1393380744 750250.3881264533 891531.1298004107 0.9938757476953658 0.7778238419218226 0.8729713106659528 1.0490150869177952 0.9323634600720566 1.0030313832875193 1.0983959443332019 0.9705417011425996 0.8415302203686524 1.0 19.765925648085833 -5.237510815940491 22.46240730087811 0.987040232892629 0.8711835426128154 0.25419788377386876 0.08054326472407063 278.9019400948211 261810.3845542797 0.02188920506653423 0.03786912185668576 5.7874757467928135e-06 5.237510815940491 -0.1158566902798136 T(ph)PVS(ph)PVKFSPGDFWGR ddPTM_KYSE-520_SHP099_60min_R1 4 TPVSPVKFSPGDFWGR 16 1 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 2 T(1)PVS(1)PVKFSPGDFWGR;T(1)PVS(0.999)PVKFS(0.001)PGDFWGR;T(1)PVS(1)PVKFSPGDFWGR;T(1)PVS(1)PVKFSPGDFWGR 88.945 0.0018414999999999998 446614000.0 421063.0 440951.0 391536.0 403797.0 463789.0 549630.0 551010.0 593910.0 820740.0 609930.0 True False 397705.79602171923 419767.0520790551 416775.0370397498 442173.74547400506 500286.55570156325 546199.5552951042 606711.4681393752 591849.8648296355 671714.305171708 604526.4947183591 0.6578798439711151 0.6943732917357395 0.6894239387041585 0.7314381575285761 0.8275676253604735 0.9035163223897594 1.0036143551028878 0.9790304808813558 1.1111412172011597 1.0 19.205446044616178 -6.208216823986772 0.9137012420454627 1.0440860222966344 0.6684268142234742 0.9543032742189848 0.03272251942337686 0.10154464161991159 0.18264580678795364 0.018356688480775724 0.017883357902659776 6.191318927887105e-07 6.208216823986772 -0.3756592080731602 T(ph)QSAPLPQNAQALQHLVIQQQHQQFLEK ddPTM_KYSE-520_SHP099_60min_R1 1 TQSAPLPQNAQALQHLVIQQQHQQFLEK 28 0 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 T(0.919)QS(0.081)APLPQNAQALQHLVIQQQHQQFLEK 70.50399999999999 0.020159 567470000.0 381470.0 338790.0 360430.0 311580.0 366200.0 333620.0 305010.0 350660.0 386300.0 304110.0 True False 360309.09865840845 322514.0198658428 383663.8945083906 341192.4695200568 395017.85660701816 331537.75382994465 335843.3874107382 349443.6423046591 316157.6578305324 301415.8219939997 1.1953888029991375 1.069996982017298 1.2728724456807983 1.1319660237572031 1.3105412117844357 1.0999348064632937 1.1142195031069864 1.159340740618505 1.0489086330604973 1.0 18.20139562366574 -7.776751022036453 0.7933677414916036 0.998816232835453 1.183393804776385 0.41688836754915337 0.07053148455174223 0.603339786041473 0.8404518081882144 0.06569653450439278 0.02552496125533203 1.6720489134410914e-08 7.776751022036453 0.18457757194093205 T(ph)QTPPLGQTPQLGLK ddPTM_KYSE-520_SHP099_60min_R1 1 TQTPPLGQTPQLGLK 15 0 H0Y3P2;D3DQV9;P78344-2;P78344;E9PKF8 H0Y3P2;E9PKF8 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 T(0.591)QT(0.409)PPLGQTPQLGLK 82.90799999999999 0.025772000000000003 543680000.0 402000.0 572600.0 426360.0 348130.0 338290.0 501670.0 307980.0 417290.0 446770.0 432800.0 True False 379700.25863286806 545091.4365098778 453843.8478001198 381216.17053089873 364911.4983931961 498538.8914449623 339113.62399514543 415842.51838621794 365647.8301551826 428965.72871330514 0.8851528996775331 1.2707109216973929 1.057995586643803 0.8886867761542803 0.8506775109698355 1.1621881611389884 0.7905378012652114 0.9694073221969255 0.8523940391507583 1.0 18.710502865773805 -5.146848375175483 5.33085331191203 0.9302320583210891 1.0968642705290126 0.19397582747273334 0.1301070173975847 0.316232510355664 12.67312954758621 0.03385554363193222 0.060021096992617935 7.131019512855935e-06 5.146848375175483 0.16663221220792346 T(ph)RHGSASQVQK ddPTM_KYSE-520_SHP099_60min_R1 1 TRHGSASQVQK 11 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 T(0.847)RHGS(0.152)AS(0.001)QVQK 115.8 0.00046942 0.0 188000.0 265190.0 197790.0 274540.0 189990.0 193520.0 189070.0 172650.0 278040.0 228130.0 True False 177571.26523129139 252449.87434169507 210539.85987518914 300632.1990565395 204941.13210477206 192312.1698974007 208183.04074537972 172051.11744681274 227554.94481801998 226108.9456824542 0.7853349839624266 1.11649662325273 0.9311434328249436 1.3295900263881872 0.9063822374926728 0.8505287984823144 0.9207200542952002 0.7609213201517471 1.0063951434172644 1.0 17.786658545855794 -5.960369397975328 24.99781948832613 0.8919018752409281 1.0482067317013022 0.16284869539066282 0.14530570441998045 240.5396235383228 151724.30880105266 0.04325222805217379 0.04904335235572529 1.095545960908329e-06 5.960369397975328 0.15630485646037406 T(ph)RHS(ph)PTPQQSNR ddPTM_KYSE-520_SHP099_60min_R1 1 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 T(0.656)RHS(0.79)PT(0.551)PQQS(0.003)NR 44.847 0.06767100000000001 0.0 35314.0 31028.0 30153.0 37993.0 31932.0 33012.0 29986.0 29990.0 38974.0 33633.0 True False 33355.062023286286 29537.368306022483 32096.710626505806 41603.843296988045 34444.86673177311 32805.959862820346 33017.2775151582 29885.971689718608 31897.30405458755 33335.03778607805 1.0006006964004883 0.8860757409538136 0.9628520847188176 1.2480514815664423 1.0332931659720082 0.9841284738702571 0.9904676792941103 0.8965333077318455 0.9568701934368002 1.0 15.02475174199532 -6.753513070418504 2.2494041567996743 0.9470192531013047 1.0248631385038887 0.10319988045938555 0.08970810171943998 0.741379985183861 7.675891779310388 0.04759640199944584 0.031304127887934886 1.7639526761973756e-07 6.753513070418504 0.07784388540258391 T(ph)RHSPTPQQSNR ddPTM_KYSE-520_SHP099_60min_R1 2 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.599)RHS(0.328)PT(0.073)PQQSNR;T(0.333)RHS(0.333)PT(0.333)PQQSNR 74.962 0.031925 28756000000.0 1498919.0 1483607.0 1534773.0 1803841.0 1474402.0 1439666.0 1362321.0 1423926.0 1742385.0 1332928.0 True False 1415770.975049054 1412332.2927804927 1633706.9233036262 1975277.5062954256 1590429.0492001667 1430680.5104770132 1500037.7016516973 1418986.7330528272 1426011.8059514684 1321119.2949222934 1.0716450667934025 1.0690422115616474 1.2366081773105273 1.4951545359207012 1.2038496866353874 1.0829305998147307 1.1354294100593902 1.074079183088678 1.0793966990205413 1.0 20.333329314805287 -6.235651430895973 5.5670513966928 1.0824221606731883 1.2247479474142993 0.27273263004486026 0.11438854477833031 0.29455334667938565 29.318853035520224 0.04323845662125021 0.04195779921451627 5.812307319730003e-07 6.235651430895973 0.14232578674111096 T(ph)RKSPSSDSWTCADTSTER ddPTM_KYSE-520_SHP099_60min_R1 2 TRKSPSSDSWTCADTSTER 19 2 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;E5RHH7;H0YIQ0 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 T(0.543)RKS(0.44)PS(0.014)S(0.003)DS(0.001)WTCADTSTER;T(0.442)RKS(0.442)PS(0.035)S(0.035)DS(0.044)WT(0.001)CADTSTER 64.488 0.042736 1560780000.0 278270.0 278700.0 260280.0 184327.0 202921.0 214920.0 146877.0 174085.0 348980.0 200379.0 True False 262833.8083825074 265310.8336627715 277058.0652627242 201845.38266006668 218889.72823744643 213578.60455947413 161724.76054138245 173481.13976674425 285614.0290698914 198603.79795250294 1.3234077650688503 1.3358799599906035 1.395029038311664 1.0163218666560394 1.1021427107340362 1.0754004040272809 0.8143084986726171 0.8735036366637515 1.4381096032121066 1.0 17.599533686602445 -5.264448720683519 24.8557133082822 1.0343631329359895 1.3498830353593023 0.44067607478268744 0.157489895672318 220.15196737287405 1818354.1744832818 0.044390901247398425 0.06915696810278114 5.439403536804925e-06 5.264448720683519 0.31551990242331285 T(ph)RS(ph)RS(ph)PESQVIGENTK ddPTM_KYSE-520_SHP099_60min_R1 3 TRSRSPESQVIGENTK 16 2 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 3 T(1)RS(1)RS(1)PESQVIGENTK;T(1)RS(1)RS(1)PESQVIGENTK;T(0.868)RS(0.716)RS(0.959)PES(0.457)QVIGENTK 110.6 0.00097985 3672600000.0 4513910.0 4269020.0 3749340.0 4171540.0 3737560.0 4041540.0 4250920.0 4423740.0 4530700.0 4021200.0 True False 4263514.414043504 4063929.8712703385 3991028.4555561068 4568001.907380769 4031684.708192597 4016315.249726855 4680644.478581219 4408395.078448674 3708039.089652581 3985575.29644626 1.0697362606209118 1.0196595394632095 1.001368223833259 1.1461336363294479 1.0115690730488647 1.007712802040901 1.1743961989012521 1.1060875157419359 0.9303648316364405 1.0 21.926356553872616 -3.877316618292712 17.724483768304655 1.0508393584101157 3.8969404954061955 0.0036108797177240026 0.0716380017453847 1803.1528293299484 264886.19496685767 0.017251359439077962 3496.006995806945 0.00013264270859991112 3.877316618292712 2.84610113699608 T(ph)RS(ph)RSPES(ph)QVIGENTK ddPTM_KYSE-520_SHP099_60min_R1 1 TRSRSPESQVIGENTK 16 2 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 3 T(1)RS(0.935)RS(0.509)PES(0.556)QVIGENTK 140.35 0.0002955 0.0 617410.0 541250.0 413500.0 583070.0 511970.0 542980.0 551470.0 583560.0 586820.0 550610.0 True False 583161.0365236783 515247.5375671865 440154.8716233921 638484.7974936125 552259.1262891727 539591.0604117961 607217.9694285438 581535.7665639272 480268.2805283793 545732.0237680982 1.0685849668435163 0.9441401917548718 0.8065403026640603 1.1699602912892801 1.011960270309972 0.988747291548147 1.1126669188952951 1.0656068202643048 0.8800441601581056 1.0 19.05783317853928 -5.2613574281824915 24.99999999996644 1.0360807691470273 0.9401936678307468 0.17114277748105544 0.09353907844191527 13.132365429126235 4005548.2219569576 0.025889947660355732 0.04138996508190753 5.478259137862307e-06 5.2613574281824915 -0.09588710131628053 T(ph)RSEPLPPSATAPPPPGPMQPR ddPTM_KYSE-520_SHP099_60min_R1 4 TRSEPLPPSATAPPPPGPMQPR 22 1 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;Q8WUI4-10 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 T(0.577)RS(0.422)EPLPPS(0.001)ATAPPPPGPMQPR;T(0.558)RS(0.441)EPLPPS(0.001)ATAPPPPGPMQPR;T(0.499)RS(0.499)EPLPPS(0.002)ATAPPPPGPMQPR;T(0.569)RS(0.429)EPLPPS(0.001)ATAPPPPGPMQPR 97.06299999999999 0.0050146 5852070000.0 1590900.0 1500970.0 1249850.0 1031960.0 1176570.0 1514100.0 1119610.0 1499760.0 1638980.0 1252250.0 True False 1502649.6056194757 1428861.148198098 1330417.330830707 1130037.1681299112 1269159.3652324416 1504649.9402731238 1232791.105140607 1494557.682606616 1341382.5473235461 1241156.039235757 1.2106854884618163 1.1512340938838928 1.0719178642919973 0.9104714736961943 1.0225622928233324 1.2122971590257205 0.9932603686960259 1.2041658223142446 1.0807525443372163 1.0 20.24325307309225 -1.0000012925055008 0.007831421147468215 1.1552649889563744e-09 2.2830728832661342 0.06952847532270434 0.09683280403257809 88851.70143314844 53.95773702580478 7001.35541598332 8826.670675243717 0.09999970239005297 1.0000012925055008 2.2830728821108695 T(ph)RSEREWDRDK ddPTM_KYSE-520_SHP099_60min_R1 2 TRSEREWDRDK 11 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.5)RS(0.5)EREWDRDK;T(0.5)RS(0.5)EREWDRDK 86.49700000000001 0.0022681999999999997 2753700000.0 1041720.0 1060550.0 1332520.0 1040210.0 1128750.0 1069470.0 903180.0 1151320.0 1900660.0 727080.0 True False 983933.7149826644 1009599.5860819954 1418416.3713073833 1139071.2456494586 1217576.2032910208 1062795.0410302463 994482.2485873591 1147326.3396401093 1555548.0557395285 720638.6368596796 1.3653635326442437 1.4009789850867813 1.9682768849147518 1.5806413747300296 1.6895794105584478 1.4747960859572817 1.3800012901348244 1.5920966222957498 2.158568769665371 1.0 19.458916478007723 -6.264954158386633 24.673973101066775 1.5492803995252364 1.6091343182908888 0.012133712134545949 0.3078956516835485 2276.4323574515984 15980641.240381224 0.1065310634390248 0.09773888867095527 5.433076768815067e-07 6.264954158386633 0.05985391876565238 T(ph)RSFGHFPGPEFLDVEK ddPTM_KYSE-520_SHP099_60min_R1 1 TRSFGHFPGPEFLDVEK 17 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 T(0.597)RS(0.403)FGHFPGPEFLDVEK 129.84 0.00011581 85648000.0 127530.0 148930.0 122130.0 123710.0 136020.0 122000.0 141050.0 138140.0 163820.0 147670.0 True False 120455.65667524782 141775.17925151245 130002.69521490908 135467.3612052322 146724.00015206623 121238.55274639782 155308.71051534268 137660.82458211854 134074.41756613448 146361.75868552143 0.822999516793615 0.9686627198579659 0.8882285672327697 0.9255652734831006 1.0024749734479697 0.8283485647838906 1.0611290265310696 0.9405518614865919 0.916048145159365 1.0 17.159179130780128 -3.5828689594522363 1.9777757009323078 0.9456760510613638 7.934518237214776e-09 0.2558365656269177 0.06244720735261806 17.09690910385879 9.359138609262612 0.015868459140285993 56.9102691290816 0.0002612949646020396 3.5828689594522363 -0.9456760431268455 T(ph)RSNPEGAEDR ddPTM_KYSE-520_SHP099_60min_R1 1 TRSNPEGAEDR 11 1 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R2I2 M0R3H9 BABAM1 BRISC and BRCA1-A complex member 1 1 T(0.504)RS(0.496)NPEGAEDR 84.365 0.014541 479690000.0 255270.0 220900.0 219740.0 213040.0 233730.0 223540.0 236580.0 243750.0 278520.0 251000.0 True False 241109.66423187105 210287.63242234002 233904.79199643113 233287.25754718826 252123.2212582153 222144.80394204718 260495.8151982969 242904.48814167784 227947.78891783563 248776.33527504507 0.9691824745520999 0.845287925758082 0.9402212301979122 0.9377389424491192 1.0134533937059163 0.8929499009479568 1.0471084997304703 0.9763970832399498 0.916276014219031 1.0 17.924489730785123 -5.30883955161735 2.3871918248011283 0.9724634982118513 0.907433684827067 0.19074644138658547 0.051264242321046975 0.4478268764253331 4.997503053860005 0.014801398353009714 0.026375104820231546 4.910892736365961e-06 5.30883955161735 -0.06502981338478431 T(ph)RSPDVISSASTALSQDIPEIASEALSR ddPTM_KYSE-520_SHP099_60min_R1 4 TRSPDVISSASTALSQDIPEIASEALSR 28 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 T(0.465)RS(0.334)PDVIS(0.091)S(0.091)AS(0.015)T(0.004)ALSQDIPEIASEALSR;T(0.592)RS(0.408)PDVISSASTALSQDIPEIASEALSR;T(0.5)RS(0.5)PDVISSASTALSQDIPEIASEALSR;T(0.604)RS(0.395)PDVISSASTALSQDIPEIASEALSR 208.34 1.0200999999999999e-21 32175340000.0 498535.0 516930.0 422890.0 393866.0 430843.0 504586.0 416566.0 510603.0 630609.0 479852.0 True False 470880.2697451166 492095.9068722517 450150.166047924 431298.9062198689 464747.89293866075 501436.6916073268 458676.55657237995 508831.83736863645 516106.3019592399 475600.88459920645 0.9900744195249596 1.0346824886310835 0.9464872346216724 0.9068505130795305 0.9771804636787175 1.0543224536470164 0.964414851664776 1.0698715116929063 1.0851668251083422 1.0 18.85939187287972 -6.754275576787582 1.2448623396940586 1.0508434463082659 0.9726769283257081 0.29732781305599043 0.045629763146598355 0.5967065572905493 1.857433877266727 0.03140885282552376 0.018150560088757088 1.7608583585334992e-07 6.754275576787582 -0.0781665179825578 T(ph)RSWDSSSPVDRPEPEAAS(ph)PTTR ddPTM_KYSE-520_SHP099_60min_R1 1 TRSWDSSSPVDRPEPEAASPTTR 23 2 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 2 T(0.487)RS(0.487)WDS(0.011)S(0.012)S(0.003)PVDRPEPEAAS(0.801)PT(0.106)T(0.093)R 113.33 0.0006207000000000001 441850000.0 161690.0 155460.0 119240.0 137510.0 167120.0 153380.0 151270.0 159410.0 216840.0 151890.0 True False 152720.73337897623 147991.46824978254 126926.40119074557 150578.9090561109 180271.3932172717 152422.69852657765 166561.84785293072 158857.04391657366 177467.32209156785 150544.3727686317 1.0144566055198179 0.9830421790472855 0.8431162112303987 1.0002294093551558 1.1974635112687126 1.0124768911876414 1.1063970362340672 1.0552174152714264 1.1788373011079825 1.0 17.19982925669059 -5.531928134285606 24.944467923456102 1.0919527823494104 0.9456860601769856 0.45796869673917606 0.07187261653537111 161.06785532578456 443977.8855541912 0.0203695741418872 0.02633376102388874 2.93813580540827e-06 5.531928134285606 -0.14626672217242476 T(ph)RSWDYIEGQDETLENVNSGTPIPDSNGEK ddPTM_KYSE-520_SHP099_60min_R1 1 TRSWDYIEGQDETLENVNSGTPIPDSNGEK 30 1 Q5T5U3;A0A087WW76;A0A452Q6Z5;E7ESW5;Q5T5U3-3;A0A1B0GV73 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.5)RS(0.5)WDYIEGQDETLENVNSGTPIPDSNGEK 204.54 1.2299000000000001e-15 196770000.0 128210.0 105580.0 101590.0 105930.0 97276.0 98225.0 101220.0 117070.0 153020.0 109130.0 True False 121097.93571970129 100507.778321189 108138.65394974723 115997.55535098429 104931.06777527122 97611.94134028628 111452.30541200272 116663.91149434331 125235.4253202902 108163.19310185521 1.119585436107324 0.9292234764791267 0.9997731284422707 1.0724309446167293 0.9701180666556287 0.9024506261419907 1.030408794487513 1.0785915998659834 1.1578377239876636 1.0 16.722850121815014 -7.167174596724097 3.8808476347974237 1.0890927723986308 0.9960849293363263 0.20134199376045858 0.0693376377628107 0.32864249188634587 8.983149681229134 0.03516609932073557 0.01900762231635244 6.804957282062464e-08 7.167174596724097 -0.09300784306230447 T(ph)RSYDNLTTACDNTVPLASR ddPTM_KYSE-520_SHP099_60min_R1 2 TRSYDNLTTACDNTVPLASR 20 1 G5E953;Q13615-3;Q13615-2;Q13615 G5E953 MTMR3 Myotubularin-related protein 3 1 T(0.5)RS(0.5)YDNLTTACDNTVPLASR;T(0.642)RS(0.358)YDNLTTACDNTVPLASR 225.68 9.8803e-19 1755790000.0 347970.0 323920.0 331160.0 289840.0 277840.0 298800.0 283720.0 339500.0 469450.0 280430.0 True False 328667.4104390026 308358.3969861673 352507.10347473394 317386.30645642645 299704.4273066468 296935.07836576796 312401.1864403614 338322.3537398954 384209.71387145546 277945.60837123863 1.1824882298554518 1.1094199285721678 1.2682593027478495 1.1419007780562187 1.0782844494752581 1.068320813218844 1.123965182508306 1.2172250381017513 1.3823197859571321 1.0 18.08444306166404 -7.289808875470084 8.234167813912478 1.2251466648505507 1.1378486300576638 0.053458623342511835 0.10190725057436294 0.6283122108408098 163.755353776553 0.053698480264626966 0.0262111229414522 5.130871339527578e-08 7.289808875470084 -0.08729803479288689 T(ph)RTPAS(ph)INATPANINLADLTR ddPTM_KYSE-520_SHP099_60min_R1 4 TRTPASINATPANINLADLTR 21 1 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 2 T(0.743)RT(0.258)PAS(0.999)INAT(0.001)PANINLADLTR;T(0.5)RT(0.5)PAS(1)INATPANINLADLTR;T(0.5)RT(0.5)PAS(1)INATPANINLADLTR;T(0.5)RT(0.5)PAS(1)INATPANINLADLTR 211.4 5.785100000000001e-19 3075470000.0 1543980.0 1282300.0 1340440.0 1295550.0 1396610.0 1348240.0 1238910.0 1310330.0 1671730.0 1375210.0 True False 1458332.3515521775 1220696.3832284599 1426846.9071798297 1418678.6824786903 1506515.2613760994 1339825.1340557642 1364151.1133964078 1305784.7710633206 1368185.9728838615 1363026.7092971904 1.0699220650665964 0.895577742462494 1.0468224118040552 1.0408297011363743 1.1052720031824579 0.9829779012522876 1.0008249318164846 0.9580038029750825 1.0037851522288448 1.0 20.378382402188542 -9.882444282628112 9.660118415124675 0.9999959665183097 1.0100692833050415 0.0031614898962045723 0.05623248849054383 0.0 0.0 0.05494480488925383 0.013326072596314546 1.310858206808185e-10 9.882444282628112 0.010073316786731845 T(ph)RTPASINATPANINLADLTR ddPTM_KYSE-520_SHP099_60min_R1 3 TRTPASINATPANINLADLTR 21 1 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 1 T(0.499)RT(0.499)PAS(0.002)INATPANINLADLTR;T(0.552)RT(0.448)PASINATPANINLADLTR;T(0.631)RT(0.369)PASINATPANINLADLTR 221.5 9.629299999999999e-19 2395121000.0 762560.0 820060.0 734170.0 559680.0 653260.0 886970.0 654760.0 818330.0 985010.0 850840.0 True False 720259.2766743269 780663.0866648444 781495.7729135334 612871.8189260728 704667.8454590408 881434.0912251844 720949.5306417997 815491.4042296573 806157.0140814196 843302.2195435041 0.8540938941963384 0.9257216079514561 0.9267090193792829 0.7267522896570013 0.8356053489821138 1.0452173263605566 0.8549124073598 0.9670215319379791 0.9559526767495147 1.0 19.685690226006773 -6.231233920018866 24.77124057682928 0.9557028820024968 0.8547682878358733 0.3909355257975575 0.0687223282869519 756.3374293073399 620266.0749719159 0.023498352668756682 0.023495577905581395 5.871730037786924e-07 6.231233920018866 -0.10093459416662343 T(ph)RTSQEELLAEVVQGQSR ddPTM_KYSE-520_SHP099_60min_R1 1 TRTSQEELLAEVVQGQSR 18 1 H0YJA2;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-11;G3V5I6;A0A087WTC9;Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4 H0YJA2;Q6PJT7-5 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 T(0.509)RT(0.246)S(0.246)QEELLAEVVQGQSR 270.34 1.2944e-29 432790000.0 432850.0 465900.0 466790.0 431770.0 415650.0 578820.0 521760.0 679920.0 806170.0 630650.0 True False 408838.9476349169 443517.464669843 496880.0302904067 472805.29098361626 448359.2902750067 575207.3696776225 574504.5926868848 677561.5162145203 659789.8498918974 625062.9316382755 0.6540764568510877 0.7095564977871811 0.7949280066698174 0.7564123019491885 0.7173026387916931 0.9202391320343013 0.9191148020586047 1.0839892783893732 1.0555574750891137 1.0 19.2536419227585 -6.595186256239812 1.254394274836757 1.0517517209765015 0.7223421384123381 0.8875373762446495 0.0492285986815708 0.14136906454896453 0.4534019195391087 0.029361800725825494 0.019668460631801877 2.5398831900948434e-07 6.595186256239812 -0.3294095825641634 T(ph)RWSGAQPLEQPSGSVLWMAAEVIR ddPTM_KYSE-520_SHP099_60min_R1 2 TRWSGAQPLEQPSGSVLWMAAEVIR 25 1 Q96II5;P10398 Q96II5 ARAF Serine/threonine-protein kinase A-Raf 1 T(0.5)RWS(0.5)GAQPLEQPSGSVLWMAAEVIR;T(0.5)RWS(0.5)GAQPLEQPSGSVLWMAAEVIR 133.94 1.1629000000000002e-05 149298900.0 45794.0 57924.0 47893.0 46694.0 48768.0 42987.0 37581.0 48299.0 56794.0 44698.0 True False 43253.71553192423 55141.244094303416 50980.2594115094 51131.78372093698 52605.7641480368 42718.70218778197 41380.05423521514 48131.46204207132 46481.64126023102 44302.0104945178 0.9763375307149256 1.2446668554946716 1.1507436985916928 1.1541639566733508 1.1874351425777065 0.9642610281325323 0.9340446127232929 1.0864396785790882 1.0491993645747284 1.0 15.435084551572503 -6.26012233035409 24.99975804322789 1.007644894537321 1.149423116825381 0.4515082406130877 0.0746941282246369 109.31357006281875 2074967.582343659 0.025210602624390475 0.02390795288698615 5.493861031537249e-07 6.26012233035409 0.14177822228805992 T(ph)S(ph)KYFSLDLTHDEVPEFVV ddPTM_KYSE-520_SHP099_60min_R1 1 TSKYFSLDLTHDEVPEFVV 19 1 Q96NE9-3;Q96NE9-2;Q96NE9 Q96NE9-3 FRMD6 FERM domain-containing protein 6 2 T(0.461)S(0.477)KY(0.559)FS(0.413)LDLT(0.091)HDEVPEFVV 72.145 0.010245 19026000.0 34320.0 41789.0 32519.0 32154.0 33847.0 28449.0 26342.0 32343.0 49514.0 32138.0 True False 32416.201184776186 39781.39371343218 34615.22677223966 35209.9064925474 36510.56633691357 28271.439238379255 29004.906433145392 32230.80968191294 40523.505746365445 31853.282322985655 1.017672240370165 1.2488946448299152 1.0867083153707193 1.1053776541935703 1.1462104899176175 0.8875518369414098 0.9105782612617964 1.0118520708509482 1.2721924646717888 1.0 14.959154422269842 -6.212066595682399 24.99673359107205 1.010559416095912 1.1253095199190268 0.18044315869950545 0.11084917433580396 643.819555383147 325956.18417732674 0.037529730694754924 0.03752969116935334 6.136678967485464e-07 6.212066595682399 0.1147501038231149 T(ph)S(ph)RT(ph)KRR ddPTM_KYSE-520_SHP099_60min_R1 2 TSRTKRR 7 3 J3KN16 J3KN16 KIAA0368 3 T(1)S(1)RT(1)KRR;T(1)S(1)RT(1)KRR 62.823 0.025381 9658300000.0 1413050.0 1456480.0 1328890.0 1280180.0 1376850.0 1228640.0 1128770.0 1233670.0 1701400.0 1243080.0 True False 1334665.2996546607 1386508.5145789506 1414552.375699176 1401847.9222998482 1485200.2617951222 1220971.602019132 1242877.087333593 1229390.6867107414 1392468.648803695 1232067.2783016046 1.0832730672747732 1.125351301018433 1.1481129323141557 1.1378014390839801 1.2054538643721304 0.990994261045738 1.0087737165188655 0.9978275605253044 1.1301888081332723 1.0 20.232649607355324 -6.271549005965093 24.978313650244946 1.0243721421662795 1.1395135280222728 0.6019964976353103 0.0465206947206562 490.67523918706314 1212329.439519917 0.016364694222152698 0.014597312205620105 5.351197672332377e-07 6.271549005965093 0.11514138585599332 T(ph)S(ph)S(ph)KESSPIPS(ph)PTSDRK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 4 T(0.575)S(0.6)S(0.61)KES(0.629)S(0.584)PIPS(0.833)PT(0.133)S(0.036)DRK 45.395 0.067322 525430000.0 364280.0 251290.0 265750.0 253840.0 293780.0 314400.0 283470.0 352620.0 337470.0 286290.0 True False 344072.66222582385 239217.65120602032 282880.6702150341 277964.8772802212 316898.8146204527 312437.7129792416 312125.9140005967 351396.84352212667 276193.95492640353 283753.69333024987 1.2125750970415425 0.8430468283900158 0.9969233066009834 0.9795991517076351 1.1168094797329264 1.1010877402593224 1.0999889035358756 1.2383868537462508 0.9733580968933933 1.0 18.114279645041453 -5.76159236085094 24.999961337255066 1.101417844130404 0.9954573663821877 0.10593483822119709 0.1078457978120326 6.977836248927974 1140334.1199536787 0.031074377671943938 0.03751810522160909 1.731440768303111e-06 5.76159236085094 -0.10596047774821615 T(ph)SDANETEDHLESLICK ddPTM_KYSE-520_SHP099_60min_R1 5 TSDANETEDHLESLICK 17 0 Q09161;F2Z2T1 Q09161 NCBP1 Nuclear cap-binding protein subunit 1 1 T(0.796)S(0.204)DANETEDHLESLICK;T(0.499)S(0.499)DANET(0.002)EDHLESLICK;T(0.5)S(0.5)DANETEDHLESLICK;T(0.5)S(0.5)DANETEDHLESLICK;T(0.495)S(0.495)DANET(0.011)EDHLESLICK 281.96 2.8520999999999998e-37 817480000.0 1375840.0 1374260.0 1242330.0 1579111.0 1540940.0 1885380.0 1971360.0 2441370.0 2786780.0 2251980.0 True False 1299519.4125309584 1308238.486793684 1322412.5795982815 1729189.2346629645 1662203.211250734 1873612.6440738013 2170644.307419541 2432901.4572900436 2280771.001006912 2232029.2092139283 0.5822143398332231 0.5861206839915939 0.5924710008898164 0.7747162212415433 0.744704954751074 0.8394212030646528 0.9724981637601392 1.0899953491858012 1.0218374345603431 1.0 21.089924476290715 -6.18067156007271 0.7460327720161049 1.0605273232784012 0.5701497517350893 0.9376461579611315 0.046070737791113266 0.155357772280983 0.1908808011234807 0.0330947062660424 0.03551121771627439 6.596725912231173e-07 6.18067156007271 -0.49037757154331185 T(ph)SDFNTFLAQEGCTK ddPTM_KYSE-520_SHP099_60min_R1 7 TSDFNTFLAQEGCTK 15 0 Q9UHD1;Q9UHD1-2;E9PHZ2 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 T(0.973)S(0.027)DFNTFLAQEGCTK;T(0.99)S(0.01)DFNTFLAQEGCTK;T(0.5)S(0.5)DFNTFLAQEGCTK;T(0.993)S(0.007)DFNTFLAQEGCTK;T(0.999)S(0.001)DFNTFLAQEGCTK;T(0.617)S(0.383)DFNTFLAQEGCTK;T(0.943)S(0.057)DFNTFLAQEGCTK 358.85 9.416299999999997e-67 2920733000.0 2258790.0 2140220.0 1851090.0 1920880.0 2197180.0 2146790.0 2096970.0 2284960.0 2496230.0 2432050.0 True False 2133490.4159137704 2037400.6186642875 1970414.2232487178 2103439.8576663677 2370085.5657558935 2133391.0872986824 2308952.1920549995 2277034.0070736716 2042977.5568374558 2410503.9291062686 0.8850806630731338 0.8452177132188642 0.8174283391354102 0.8726141585034671 0.9832324009671451 0.885039456496414 0.9578711588788321 0.9446298674642347 0.8475313116767751 1.0 21.20090335064411 -5.570872319374579 8.135077315178073 0.9319590799980217 0.848181073755413 0.44997817647329286 0.044428623922293756 0.22570241257501605 33.92842103135002 0.012586881527492483 0.016302408613086652 2.6861340409173013e-06 5.570872319374579 -0.08377800624260878 T(ph)SDPALCTLIVSAAADSAVR ddPTM_KYSE-520_SHP099_60min_R1 1 TSDPALCTLIVSAAADSAVR 20 0 Q6IA86-4;Q6IA86-7;Q6IA86-2;Q6IA86-3;Q6IA86-5;Q6IA86;Q6IA86-6 Q6IA86-4 ELP2 Elongator complex protein 2 1 T(0.5)S(0.5)DPALCTLIVSAAADSAVR 116.29 0.00036701 52810000.0 28430.0 35920.0 32637.0 21276.0 27064.0 28712.0 27778.0 31162.0 39450.0 32925.0 True False 26852.93122620009 34194.3492829808 34740.83324104633 23298.06464313736 29193.7828269043 28532.797757824384 30586.071327154812 31053.906295265486 32286.87445357106 32633.310115262397 0.8228687537780955 1.047835759296398 1.0645819599158057 0.7139350731153994 0.8946007231197348 0.8743458036296408 0.9372653653314162 0.9516014828278718 0.9893839864706427 1.0 14.994057712203503 -7.474159209725607 1.7438907268630353 0.9973569591057008 0.908742535333113 0.1220571578197267 0.09530295484188753 0.9491388905698375 5.146071189071758 0.08692824195171309 0.029162691058868075 3.356145574251805e-08 7.474159209725607 -0.08861442377258777 T(ph)SDVGGYYYEK ddPTM_KYSE-520_SHP099_60min_R1 2 TSDVGGYYYEK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.694)S(0.306)DVGGYYYEK;T(0.973)S(0.027)DVGGYYYEK 280.57 4.5672e-21 3391900000.0 4108500.0 3774800.0 3626300.0 4043000.0 3624200.0 3518600.0 3571900.0 4041600.0 4686400.0 3567100.0 True False 3880593.3149083 3593452.941909682 3860057.100285148 4427245.504427724 3909403.921122765 3496639.1122415974 3932982.510384628 4027580.6329165353 3835467.8945301757 3535498.2691618027 1.0976086026562566 1.0163922220676462 1.091800025460143 1.2522267492093375 1.1057575548041798 0.9890088598659057 1.1124266541691905 1.1391833134375697 1.0848450777037122 1.0 21.753482122347936 -6.021828143899943 24.840537610775062 1.073487119068513 1.1150162087877158 0.10111591167439171 0.0692052401187178 2269.7127454925926 2582940.5260925377 0.02449436794692107 0.02471690927479146 9.509810350475472e-07 6.021828143899943 0.04152908971920288 T(ph)SFDDRLEDDDFDLIEENLGVK ddPTM_KYSE-520_SHP099_60min_R1 1 TSFDDRLEDDDFDLIEENLGVK 22 1 Q7KZ85;Q7KZ85-3 Q7KZ85 SUPT6H Transcription elongation factor SPT6 1 T(0.5)S(0.5)FDDRLEDDDFDLIEENLGVK 193.6 2.734e-13 69088000.0 49527.0 54454.0 53328.0 55983.0 52555.0 57886.0 49542.0 61343.0 81225.0 53257.0 True False 46779.638580373234 51837.94810287964 56765.60820781685 61303.60748809729 56690.77950295426 57524.712002278575 54550.18884332578 61130.21545056384 66476.58751562261 52785.18441331904 0.8862266770554191 0.9820548829947748 1.0754079736338564 1.1613790530327073 1.0739903655361625 1.089788974721544 1.0334374967071516 1.158094191201483 1.2593796584112886 1.0 15.687845434648343 -4.584837287898281 1.9716218432655908 1.1125551838329855 0.8790832521300959 0.5269505398373743 0.06881877949581702 0.3373110351789566 2.1877245566071126 0.019383082448719936 0.11319178130252985 2.601133917456262e-05 4.584837287898281 -0.2334719317028896 T(ph)SFDQDSDVDIFPSDFPTEPPSLPR ddPTM_KYSE-520_SHP099_60min_R1 2 TSFDQDSDVDIFPSDFPTEPPSLPR 25 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 T(0.4)S(0.4)FDQDS(0.2)DVDIFPSDFPTEPPSLPR;T(0.368)S(0.368)FDQDS(0.264)DVDIFPSDFPTEPPSLPR 110.9 0.00050983 177650000.0 103137.0 80639.0 75143.0 79955.0 80568.0 96667.0 85456.0 98489.0 100168.0 87502.0 True False 97415.7850114877 76764.9813983934 79986.83801305098 87553.89916065264 86908.24323078725 96063.66539619694 94094.72645018883 98147.36464650549 81980.01622979225 86726.80035552589 1.123248922041902 0.8851356337799247 0.9222851262257427 1.0095368306190953 1.0020921200196198 1.1076583593813645 1.0849555854068065 1.1316843725833583 0.945267390169189 1.0 16.404190264176467 -5.932766987464548 2.5295559378318786 1.0634539789184807 0.9716002620958002 0.13567921134818117 0.07732337919406103 0.43981849486169755 5.713280536131473 0.026086535032507963 0.029667979358369317 1.1674358147863053e-06 5.932766987464548 -0.09185371682268051 T(ph)SFGSLTDSSEEALEGMVR ddPTM_KYSE-520_SHP099_60min_R1 1 TSFGSLTDSSEEALEGMVR 19 0 G3V160;Q969H4-2;Q969H4 G3V160 CNKSR1 Connector enhancer of kinase suppressor of ras 1 1 T(0.5)S(0.5)FGSLTDSSEEALEGMVR 163.56 1.5280999999999998e-07 21434000.0 67649.0 64863.0 57151.0 61030.0 62076.0 68265.0 53065.0 75596.0 83912.0 67256.0 True False 63896.375115061936 61746.884118652095 60835.04490483314 66830.27285066154 66961.02803587467 67838.932813384 58429.32806449241 75333.77512023906 68675.69604938039 66660.16416437624 0.9585391202683041 0.9262936101746079 0.9126146877589586 1.0025518791982844 1.004513398298218 1.0176832545161614 0.8765254150951752 1.1301168556152172 1.0302359274128712 1.0 16.024537249935502 -5.903704076249015 0.5400247656931036 1.034633214253486 0.9239605858275953 0.22599767600469678 0.05981944531088539 1.6078994508568079 0.9774143807998519 0.049423584281598876 0.08809430308625542 1.2482337580595712e-06 5.903704076249015 -0.11067262842589065 T(ph)SFSFQK ddPTM_KYSE-520_SHP099_60min_R1 1 TSFSFQK 7 0 Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7;H0Y7F8;Q9BPZ7-4 Q9BPZ7-3 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 T(0.659)S(0.341)FSFQK 113.74 0.013384 556220000.0 1130900.0 1014900.0 942620.0 1090800.0 937660.0 939380.0 1094300.0 1040700.0 1255700.0 1006200.0 True False 1068166.7226067418 966142.6806040432 1003382.7934453265 1194469.3040390222 1011448.5074443948 933516.9809746823 1204922.5233388126 1037090.054601206 1027696.533621019 997285.8508117537 1.071073776628129 0.9687720725383188 1.00611353568148 1.197720095062783 1.0142012008102925 0.9360575808980285 1.208201763173568 1.0399125323567493 1.030493446572527 1.0 19.92764755623249 T(ph)SFYSQDVLVPWHLK ddPTM_KYSE-520_SHP099_60min_R1 1 TSFYSQDVLVPWHLK 15 0 Q96BT7;Q96BT7-4 Q96BT7 ALKBH8 Alkylated DNA repair protein alkB homolog 8 1 T(0.472)S(0.472)FY(0.023)S(0.033)QDVLVPWHLK 79.332 0.017562 0.0 77112.0 62612.0 62138.0 58883.0 58783.0 52210.0 65494.0 76983.0 83397.0 58418.0 True False 72834.44364103908 59604.02553747194 66143.51490431526 64479.22261618049 63408.88767048162 51884.13802368383 72114.77267984294 76715.96394096725 68254.20706728684 57900.46196851628 1.2579250866883107 1.0294222793918637 1.1423659268950426 1.1136219025547922 1.095136126978755 0.8960919526323665 1.2454956355798295 1.324962898960668 1.1788197321188987 1.0 15.821287238593472 T(ph)SGETTQTHTEPTGDSK ddPTM_KYSE-520_SHP099_60min_R1 1 TSGETTQTHTEPTGDSK 17 0 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.473)S(0.473)GET(0.023)T(0.023)QT(0.007)HTEPTGDSK 65.652 0.046435000000000004 146600000.0 361720.0 348800.0 368940.0 377000.0 305220.0 327500.0 333020.0 405400.0 458520.0 382330.0 True False 341654.6705290571 332043.1244405264 392722.46272487176 412829.9666508172 329239.0775357573 325455.9510200435 366684.9115619951 403993.76202107174 375264.3263485781 378942.8536482386 0.9015994555374437 0.8762353511718477 1.0363632905172144 1.0894253913916925 0.8688356947915428 0.8588523253222625 0.9676522674376064 1.0661073513635573 0.9902926595283542 1.0 18.53162077408778 -7.012541968561237 23.963507851828698 1.0202959874011026 0.9413041238318648 0.19717869307206037 0.0722823222365592 641.7174958688196 1226103.6516215682 0.03575718284113592 0.022003081985585968 9.715340616967572e-08 7.012541968561237 -0.07899186356923782 T(ph)SGLLEELNAEAGHLDPGFLASDK ddPTM_KYSE-520_SHP099_60min_R1 1 TSGLLEELNAEAGHLDPGFLASDK 24 0 Q96B23 Q96B23 C18orf25 Uncharacterized protein C18orf25 1 T(0.5)S(0.5)GLLEELNAEAGHLDPGFLASDK 107.91 0.00086207 15399000.0 24860.0 22505.0 24562.0 23615.0 23342.0 21444.0 22050.0 22477.0 33749.0 20441.0 True False 23480.966242818642 21423.82601930632 26145.30582058953 25859.362499891355 25178.882602187405 21310.160041752086 24279.029187261993 22399.03253317124 27621.03234305628 20259.908642857346 1.1589867781115035 1.0574492904665351 1.2904947540228462 1.276381002290852 1.2427934916214072 1.0518389010241171 1.1983780191339408 1.1055840837203403 1.3633344962191676 1.0 14.306340048219901 T(ph)SLASLR ddPTM_KYSE-520_SHP099_60min_R1 3 TSLASLR 7 0 Q9HDC5 Q9HDC5 JPH1 Junctophilin-1 1 T(0.592)S(0.408)LASLR;T(0.712)S(0.288)LASLR;T(0.894)S(0.106)LASLR 169.09 0.0031605 1653830000.0 2342900.0 2400240.0 2152820.0 2559290.0 2467280.0 2440440.0 2461390.0 2643310.0 3121120.0 2281630.0 True False 2212934.66654464 2284928.8675663066 2291594.2218337883 2802524.152121401 2661440.8990971157 2425208.3087247466 2710211.3220514683 2634140.97456319 2554403.2850324386 2261416.53328128 0.9785612840345278 1.0103971709497102 1.0133445953491464 1.23927817404562 1.1768910591784727 1.0724288396378738 1.1984573749087233 1.1648190131258536 1.1295589500825127 1.0 21.10879531778371 -5.144235775755519 7.192450545153607 1.148008398128713 0.9991003921634661 0.4999306221035624 0.06368276638893693 0.19591912575745263 10.894192975260305 0.016623889508757834 0.02901847096708475 7.174047110039739e-06 5.144235775755519 -0.1489080059652469 T(ph)SLFENDKDAGMENESVK ddPTM_KYSE-520_SHP099_60min_R1 2 TSLFENDKDAGMENESVK 18 1 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 T(0.5)S(0.5)LFENDKDAGMENESVK;T(0.5)S(0.5)LFENDKDAGMENESVK 149.18 1.0205e-05 649820000.0 1140030.0 1144970.0 1007390.0 1049960.0 841840.0 1090160.0 1053490.0 1062020.0 1148760.0 1030930.0 True False 1076790.2633065376 1089963.9225649917 1072327.9712809906 1149747.8827180145 908088.0185856146 1083355.9070656805 1159987.0502715926 1058336.1004973324 940174.1418829989 1021796.762251403 1.0538203907927475 1.0667130322114067 1.0494532874798392 1.1252216929956669 0.8887168682985008 1.0602459775646964 1.1352424406940813 1.0357598884590509 0.9201185368912711 1.0 19.96267683874044 -7.635352099143914 6.524006983909626 0.9616295108638057 1.0533988381540274 0.24448132328955152 0.06515863065060876 0.3043323172092879 15.972486317411892 0.04582890621988472 0.01682709370996518 2.3155166109104138e-08 7.635352099143914 0.09176932729022169 T(ph)SPADGKPR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPADGKPR 9 1 H0Y951;A0A087WX55;A0A087WY90;H0Y3A4;A0A087WZ65;A0A087WTF3;Q12955-6;Q12955-7;Q12955-5;Q12955-4;Q12955 H0Y951 ANK3 Ankyrin-3 1 T(0.559)S(0.441)PADGKPR 118.28 0.0021711 398120000.0 506540.0 405800.0 332850.0 388140.0 376100.0 474250.0 460610.0 341920.0 504090.0 440640.0 True False 478441.2164375439 386304.75888178166 354306.04357882956 425028.70890145394 405696.9302837238 471290.02983589494 507172.9539203968 340733.95932472823 412559.96307479456 436736.2724127321 1.0954922836942635 0.8845263910589711 0.8112585694370654 0.9731930589447031 0.9289288660235783 1.0791181305648645 1.1612796691205427 0.7801824140741895 0.9446432301022846 1.0 18.73640283119459 -4.243051969677043 23.331346419742605 0.950729744117804 1.095492599401674 0.1374063891152555 0.1082500906423171 3506.7281091647646 4449427.404179613 0.028530609794394493 0.8356533706787466 5.714102549988315e-05 4.243051969677043 0.14476285528387 T(ph)SPAPWKR ddPTM_KYSE-520_SHP099_60min_R1 2 TSPAPWKR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.979)S(0.021)PAPWKR;T(0.547)S(0.453)PAPWKR 117.84 0.0017498000000000001 1526110000.0 2730140.0 2725700.0 2474810.0 2292480.0 2305030.0 2404470.0 1982660.0 2089040.0 2985000.0 2096680.0 True False 2578693.6918008393 2594753.28064089 2634340.2124360027 2510356.609940755 2486422.7471733363 2389462.8108371384 2183086.621696911 2081793.6078256 2442999.245726479 2078105.046392354 1.2408870746344227 1.248615071285954 1.267664604832796 1.2080027495716839 1.1964855922417554 1.1498277312714822 1.0505179348304878 1.0017749638978306 1.1755898721133426 1.0 20.986837152381934 -6.355694956404319 1.3963646995202128 1.054623890595156 1.2457803921883093 0.7483868588751756 0.04817102432962113 0.2044701180115671 0.8035080989567144 0.022801546164819893 0.019064259437129128 4.408644130237185e-07 6.355694956404319 0.19115650159315334 T(ph)SPCQS(ph)PTISEGPVPSLPIRPSR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPCQSPTISEGPVPSLPIRPSR 23 1 A0A0D9SGJ6;J3KQV8;O43426;J3KPK1;C9JFZ1;O43426-4;O43426-2 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 2 T(0.823)S(0.185)PCQS(0.8)PT(0.174)IS(0.018)EGPVPSLPIRPSR 67.64399999999999 0.018038 179970000.0 183730.0 161450.0 162450.0 146470.0 166090.0 164820.0 151790.0 176550.0 186320.0 150950.0 True False 173538.13064332525 153693.69965860937 172921.78692919028 160390.46476218873 179160.33807716996 163791.2972431254 167134.41452764187 175937.58925707967 152488.98474497756 149612.7004373228 1.159915770092162 1.0272770908442777 1.1557961752159693 1.072037763461004 1.1974941803301353 1.0947686711379319 1.1171138147971564 1.1759535704041726 1.0192248672689368 1.0 17.190873123460612 -7.867383459094065 6.566912585216973 1.0021189391521759 1.1219938000178324 0.47590036053048734 0.04848512540268177 0.17828416967629382 9.319631367703222 0.04383083001918402 0.01137659951205243 1.35711465685313e-08 7.867383459094065 0.11987486086565657 T(ph)SPDSLRR ddPTM_KYSE-520_SHP099_60min_R1 3 TSPDSLRR 8 1 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 T(0.995)S(0.005)PDSLRR;T(0.994)S(0.006)PDSLRR;T(0.572)S(0.428)PDSLRR 110.88 0.0012720999999999998 3082180000.0 4262690.0 3928430.0 3849720.0 3285420.0 3596550.0 3688850.0 3316930.0 3419330.0 4325070.0 3495590.0 True False 4026230.0882381573 3739702.326106356 4097879.1109697856 3597665.3290024544 3879578.023429749 3665826.5188405737 3652237.654517229 3407469.1423076196 3539746.3141421163 3464621.792127864 1.1620980094815403 1.0793969877472676 1.1827781953807415 1.0384005945979111 1.1197695610657208 1.0580740810353029 1.0541519027605426 0.9835039282065062 1.0216833254887867 1.0 21.72426644162831 -6.443110858468663 0.6158006714268118 0.9919897985067397 1.1363370683342302 0.6343299584286619 0.038184842320517956 0.5013860131729007 0.4051793688667459 0.030306372370429886 0.02826183303848549 3.6048661308228704e-07 6.443110858468663 0.14434726982749047 T(ph)SPDTLR ddPTM_KYSE-520_SHP099_60min_R1 4 TSPDTLR 7 0 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.838)S(0.162)PDTLR;T(0.921)S(0.079)PDTLR;T(0.713)S(0.287)PDTLR;T(0.562)S(0.438)PDTLR 170.3 6.638899999999999e-05 18704360000.0 21015280.0 18487430.0 17703870.0 17752670.0 18351930.0 18082720.0 18443200.0 19461420.0 22157500.0 18183180.0 True False 19849520.52547796 17599266.11260181 18845089.787393548 19439878.419265147 19796122.48280188 17969859.037035573 20307618.644286208 19393912.876349594 18134256.545120437 18022091.17149999 1.1013994067940271 0.976538512935345 1.045666099902715 1.0786694082431032 1.0984364852236088 0.9971017717107649 1.126818106236225 1.0761188971798674 1.0062237712900834 1.0 24.103263086445864 -1.2228003284315832 15.627301373018287 1.0533409188969558 1.084734768462448 0.0 0.05008804987167615 0.0 0.0 0.011085217578338103 0.0 0.05986867844959963 1.2228003284315832 0.03139384956549218 T(ph)SPDTLRR ddPTM_KYSE-520_SHP099_60min_R1 9 TSPDTLRR 8 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.994)S(0.006)PDTLRR;T(0.996)S(0.004)PDTLRR;T(0.854)S(0.146)PDTLRR;T(0.997)S(0.003)PDTLRR;T(0.795)S(0.158)PDT(0.048)LRR;T(0.988)S(0.012)PDTLRR;T(0.886)S(0.114)PDTLRR;T(0.641)S(0.359)PDTLRR;T(0.943)S(0.057)PDTLRR 142.98 0.00066726 48830790000.0 22340890.0 21387510.0 20243110.0 17290670.0 18817570.0 18527280.0 16436810.0 17048900.0 24694450.0 17246100.0 True False 21101596.296239913 20360021.91629299 21548013.260721173 18933970.078170497 20298405.70167266 18411644.373174433 18098403.16260682 16989761.345143173 20210560.37642556 17093312.971262775 1.2344942336056124 1.1911103453451182 1.2606107017959378 1.1076828763389652 1.1875056483081001 1.0771255639049044 1.058800198243243 0.9939419803350179 1.182366485092942 1.0 24.026928706866162 -5.9236922527921845 0.9334890113795966 1.0537805062048422 1.2267475677395496 0.5721500926039284 0.05906248535402584 0.40613000490720524 0.7711989711005484 0.02940191366978513 0.03880278110196458 1.1920864381024452e-06 5.9236922527921845 0.17296706153470742 T(ph)SPGGRT(ph)SPEAR ddPTM_KYSE-520_SHP099_60min_R1 3 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 2 T(0.777)S(0.223)PGGRT(0.559)S(0.441)PEAR;T(0.91)S(0.09)PGGRT(0.846)S(0.153)PEAR;T(0.693)S(0.308)PGGRT(0.676)S(0.323)PEAR 83.729 0.0074083 3346116000.0 1513742.0 1453636.0 1514310.0 1216003.0 1271456.0 1289085.0 1132245.0 1214130.0 1737236.0 1304828.0 True False 1429771.7136901368 1383801.1446078813 1611924.8455816675 1331571.559515368 1371512.3536049514 1281039.342353198 1246703.3742463242 1209918.4664100728 1421797.7345557397 1293268.2390608212 1.1055492360412758 1.0700031925417155 1.2463963753971539 1.0296174600888388 1.0605010717660177 0.9905441915773762 0.9639944263625365 0.9355510557413228 1.0993834779305005 1.0 20.302590107447745 -5.476761235167467 13.964399009359934 1.0059099607653397 1.1343414849516553 0.49378811464016537 0.06018349116481317 2.68884357225258 813.1486729389807 0.017103561731785406 0.025333224535887204 3.336097731164517e-06 5.476761235167467 0.12843152418631565 T(ph)SPGGRTS(ph)PEAR ddPTM_KYSE-520_SHP099_60min_R1 6 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 2 T(0.899)S(0.101)PGGRT(0.016)S(0.984)PEAR;T(0.763)S(0.237)PGGRT(0.288)S(0.712)PEAR;T(0.966)S(0.034)PGGRT(0.002)S(0.998)PEAR;T(0.994)S(0.006)PGGRT(0.003)S(0.997)PEAR;T(0.884)S(0.121)PGGRT(0.228)S(0.767)PEAR;T(0.557)S(0.442)PGGRT(0.242)S(0.758)PEAR 182.7 1.4964e-07 4690540000.0 3893727.0 3793192.0 3693099.0 3227523.0 3411697.0 3346864.0 2931818.0 3051521.0 4384280.0 3162775.0 True False 3677734.201357658 3610961.3626227276 3931162.070707327 3534265.815529828 3680178.143999443 3325974.9803198385 3228194.7752263094 3040935.9858813533 3588205.27070475 3134755.2741017127 1.1732125412601913 1.1519117273540516 1.2540570880238269 1.1274455281178521 1.1739921691507562 1.0609998834033132 1.0298075903712682 0.9700712559620004 1.1446524391710216 1.0 21.579921387591963 -6.310115889220561 2.724689373824597 1.0335966867908721 1.1789495311820761 0.6325040925639386 0.05165206595203816 0.17855863368518163 2.6232741547971226 0.019035605448834286 0.017086434578474665 4.896481418774911e-07 6.310115889220561 0.145352844391204 T(ph)SPGRPLGTTK ddPTM_KYSE-520_SHP099_60min_R1 2 TSPGRPLGTTK 11 1 Q7Z6I8;Q7Z6I8-2 Q7Z6I8 C5orf24 UPF0461 protein C5orf24 1 T(0.971)S(0.029)PGRPLGTTK;T(0.924)S(0.076)PGRPLGTTK 131.36 0.00045449 986110000.0 2928800.0 2694900.0 2507800.0 2393400.0 2530100.0 2585300.0 2522900.0 2502200.0 3005500.0 2646700.0 True False 2766333.6255819458 2565432.9588726307 2669456.8006218676 2620868.016398048 2729204.4757002126 2569164.1837316556 2777939.3531312123 2493520.45221787 2459776.962489424 2623252.2971014427 1.0545434873491202 0.9779589106649409 1.0176134425085526 0.9990910974495175 1.0403896257770713 0.9793812766581577 1.0589676624702438 0.9505454183621912 0.9376821913802761 1.0 21.322925137991827 -7.2873911710769015 24.865920127749224 0.9580853395717466 1.0153181124715873 0.40685139856133556 0.03042732965646739 662.98761899913 635242.7630246336 0.01532822185209337 0.007366447773405062 5.159514400394272e-08 7.2873911710769015 0.057232772899840745 T(ph)SPHWK ddPTM_KYSE-520_SHP099_60min_R1 9 TSPHWK 6 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 T(0.693)S(0.307)PHWK;T(0.674)S(0.326)PHWK;T(0.5)S(0.5)PHWK;T(0.713)S(0.287)PHWK;T(0.988)S(0.012)PHWK;T(0.5)S(0.5)PHWK;T(0.5)S(0.5)PHWK;T(0.902)S(0.098)PHWK;T(0.542)S(0.458)PHWK 138.37 0.0092152 33863400000.0 42680000.0 37415100.0 35547000.0 39876700.0 38808600.0 38059500.0 37853200.0 39175500.0 43446000.0 36683400.0 True False 40312455.319529325 35617622.43478995 37838416.49721098 43666569.57863299 41862616.02927128 37821956.54304527 41679770.86763109 39039609.33413043 35557301.58453354 36358413.61525332 1.1087517664031739 0.9796253162114699 1.0407059256660405 1.2010031581882248 1.1513873094757028 1.0402532119052068 1.1463583452426902 1.0737434737183438 0.9779662545457238 1.0 25.115785917667218 -7.690163488274939 4.92338879068615 0.9889019148107591 1.0939110431436738 0.32174787251620096 0.06072812195142897 0.2521236346650878 11.019687280334962 0.049234281378931856 0.016770120427444517 2.040969485922253e-08 7.690163488274939 0.10500912833291476 T(ph)SPINLGLNVNDLLK ddPTM_KYSE-520_SHP099_60min_R1 5 TSPINLGLNVNDLLK 15 0 P50616 P50616 TOB1 Protein Tob1 1 T(0.621)S(0.379)PINLGLNVNDLLK;T(0.659)S(0.341)PINLGLNVNDLLK;T(0.5)S(0.5)PINLGLNVNDLLK;T(0.5)S(0.5)PINLGLNVNDLLK;T(0.5)S(0.5)PINLGLNVNDLLK 276.67 1.5539e-35 1602974000.0 2465127.0 2818070.0 2415902.0 1858396.0 2121167.0 2700519.0 2134601.0 2512252.0 3390892.0 2416393.0 True False 2328381.491201159 2682685.687190692 2571634.908499871 2035017.3970928702 2288090.7751107044 2683664.0592143405 2350387.3007781715 2503537.584176023 2775191.4902311396 2394985.6379453065 0.9721901686219346 1.1201260018795802 1.0737579665430121 0.8496992068974333 0.9553672217732759 1.1205345103934299 0.9813784531896415 1.0453246752343137 1.1587507859178718 1.0 21.19158557387552 -7.527302232933739 24.921491498128265 1.086929517009524 1.0130481615109572 0.0950793050969424 0.08491290414725673 300.14556528306724 1690916.6472982385 0.05854827123307349 0.022325237306708032 2.9695987181088894e-08 7.527302232933739 -0.07388135549856667 T(ph)SPITR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPITR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.96)S(0.04)PITR 130.64 0.034341 3782600000.0 5281100.0 4287800.0 4027700.0 4512800.0 4973700.0 5033200.0 4661100.0 4216200.0 4973900.0 4905900.0 True False 4988146.855388152 4081807.6518809837 4287331.986547849 4941695.155177209 5365101.893518101 5001785.93182926 5132289.475952243 4201574.9862684775 4070765.141815388 4862437.542732446 1.0258531470175067 0.8394570862882924 0.8817248445598713 1.0162999754234834 1.1033770298061623 1.0286581344998638 1.0554972543808046 0.8640882169372612 0.8371861038913874 1.0 22.213248288344573 -3.047949739028802 14.319136766571104 0.9651535536306539 83.42790716539966 0.0 0.09389624019086885 0.0 0.0 0.023453256190319276 0.0 0.0008954683922561429 3.047949739028802 82.462753611769 T(ph)SPKPAVVETVTTAKPQQIQALMDEVTK ddPTM_KYSE-520_SHP099_60min_R1 7 TSPKPAVVETVTTAKPQQIQALMDEVTK 28 2 P56192;H0YI94;H0YIP0 P56192 MARS Methionine--tRNA ligase, cytoplasmic 1 T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK;T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK;T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK;T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK;T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK;T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK;T(0.5)S(0.5)PKPAVVETVTTAKPQQIQALMDEVTK 269.65 2.3189e-41 4735880000.0 2312820.0 2283580.0 2220480.0 1813000.0 2088360.0 2239280.0 1650750.0 2066600.0 2731570.0 2031830.0 True False 2184523.264107633 2173873.38907654 2363615.693693619 1985306.9749016743 2252702.0508569987 2225303.8229012587 1817623.9197674724 2059431.4469480638 2235585.7452760707 2013829.5669398212 1.084760746375968 1.0794723767910104 1.1736920206635593 0.9858366405447659 1.1186160377415473 1.1050109996561377 0.902570877698206 1.0226443591636896 1.1101166563331504 1.0 20.94151016064547 T(ph)SPLKDNPS(ph)PEPQLDDIKR ddPTM_KYSE-520_SHP099_60min_R1 5 TSPLKDNPSPEPQLDDIKR 19 2 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 2 T(0.5)S(0.5)PLKDNPS(1)PEPQLDDIKR;T(0.5)S(0.5)PLKDNPS(1)PEPQLDDIKR;T(0.827)S(0.173)PLKDNPS(1)PEPQLDDIKR;T(0.5)S(0.5)PLKDNPS(1)PEPQLDDIKR;T(0.834)S(0.166)PLKDNPS(1)PEPQLDDIKR 187.21 3.8701e-12 13671000000.0 6357620.0 6124940.0 5817840.0 5429230.0 5831340.0 5910860.0 5600580.0 5565140.0 7283000.0 5728720.0 True False 6004950.144998733 5830688.688677623 6192867.275273127 5945222.386842481 6290233.282214012 5873968.130217813 6166741.282793468 5545835.828253435 5960590.789489424 5677967.997676719 1.0575878813434325 1.0268970679411003 1.0906837230866908 1.0470686677478838 1.1078317603741015 1.0345194148014383 1.0860824304252406 0.9767289689766921 1.0497753407430874 1.0 22.436943287050937 -7.254286561629133 24.999282341466646 1.0099391154585584 1.0638082105426683 0.43278318313453434 0.02912782898465375 503.03249288419914 1758119.4499584385 0.013164517708361795 0.007384872789545761 5.568182209132934e-08 7.254286561629133 0.053869095084109864 T(ph)SPLKDNPSPEPQLDDIKR ddPTM_KYSE-520_SHP099_60min_R1 4 TSPLKDNPSPEPQLDDIKR 19 2 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 1 T(0.5)S(0.5)PLKDNPSPEPQLDDIKR;T(0.5)S(0.5)PLKDNPSPEPQLDDIKR;T(0.5)S(0.5)PLKDNPSPEPQLDDIKR;T(0.5)S(0.5)PLKDNPSPEPQLDDIKR 132.65 1.5552e-05 7484190000.0 2082890.0 1876500.0 1736350.0 1559900.0 1805390.0 1702780.0 1690780.0 1818890.0 2252270.0 1764010.0 True False 1967347.9395617272 1786350.123316077 1848277.8992582287 1708152.4269989622 1947463.9217360578 1692152.3184058298 1861700.5428226232 1812580.695122115 1843314.5431063236 1748382.243779013 1.1252390297155126 1.0217160061377648 1.0571360501026925 0.976990262327821 1.1138662204248557 0.9678388833029751 1.0648132291704588 1.0367187733526402 1.0542972222836813 1.0 20.737589200912005 -4.256509012251985 24.528109326860594 1.0342966666416422 1.1252390789947158 0.30887417446156407 0.04150336939882087 467.9059116791411 2327683.5529392664 0.009369496706540132 0.0743238270000553 5.53976047998056e-05 4.256509012251985 0.09094241235307354 T(ph)SPLNSSGSSQGR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPLNSSGSSQGR 13 0 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 T(0.929)S(0.071)PLNSSGSSQGR 140.33 0.00088107 756720000.0 1510800.0 1328300.0 1403300.0 1347400.0 1349400.0 1271100.0 1295600.0 1413900.0 1740200.0 1337700.0 True False 1426992.9122948658 1264486.4741810535 1493758.9633593885 1475456.490889417 1455590.102964257 1263166.5934093941 1426571.8918374914 1408995.5109067403 1424223.5468720996 1325849.0187148515 1.0762861322460784 0.9537183015051919 1.1266433374195899 1.112838996041631 1.0978550969364247 0.9527228029582014 1.0759685844322386 1.062711885756406 1.0741973835396452 1.0 20.33848506698205 -9.233388390956687 15.511761849094322 0.9999910704545463 1.0582730832520957 0.08904854733842082 0.05674690955478089 0.0 0.0 0.05583125920986017 0.013541069349028961 5.842673382665445e-10 9.233388390956687 0.05828201279754941 T(ph)SPLVSQNNEQGSTLR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPLVSQNNEQGSTLR 16 0 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 T(0.982)S(0.018)PLVSQNNEQGSTLR 226.06 1.2395e-17 910100000.0 721040.0 576800.0 486610.0 397370.0 487180.0 547220.0 515360.0 590560.0 658310.0 617960.0 True False 681042.473842396 549089.6622055485 517977.65920352837 435135.92532635306 525518.2943249787 543804.5969990477 567457.6182289048 588511.4851977403 538777.4986446231 612485.3551656045 1.1119326659790176 0.8964943530071589 0.8456980315284061 0.7104429871775473 0.8580095669110137 0.8878654688029449 0.9264835696773108 0.960858051926185 0.8796577650398641 1.0 19.224315823396843 -6.760456898348494 3.165511020402389 0.9406357414508051 0.8734508686666802 0.07249895720533162 0.09627695133668072 0.7044626510365424 14.608852212205994 0.045068129910643566 0.031016906778284663 1.7359735413988482e-07 6.760456898348494 -0.06718487278412488 T(ph)SPPCSPANLSR ddPTM_KYSE-520_SHP099_60min_R1 2 TSPPCSPANLSR 12 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 T(0.621)S(0.379)PPCSPANLSR;T(0.614)S(0.386)PPCSPANLSR 137.95 0.0014575999999999999 1980500000.0 4424000.0 4407400.0 3799300.0 3440500.0 3933400.0 3963300.0 3637400.0 4014500.0 4599400.0 4387200.0 True False 4178591.9009746457 4195661.888357729 4044208.957094936 3767484.0855759596 4242936.202015416 3938563.5745885074 4005103.8896030295 4000574.6364913452 3764264.90143865 4348332.821189954 0.9609641379362361 0.9648897775054749 0.9300596627256806 0.8664203593654451 0.9757616025477793 0.9057640563747579 0.9210665453402443 0.9200249385226584 0.8656800332980332 1.0 22.052030937726215 -4.83794522269815 4.767123698532721 0.9188441802707581 0.9630120607627652 0.1373425548958057 0.039520158056129545 0.3322701184275145 13.65729770485348 0.009841520291391305 0.022123774078077262 1.4522947831039117e-05 4.83794522269815 0.04416788049200715 T(ph)SPPLLDR ddPTM_KYSE-520_SHP099_60min_R1 3 TSPPLLDR 8 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.969)S(0.031)PPLLDR;T(0.744)S(0.256)PPLLDR;T(0.608)S(0.392)PPLLDR 187.5 3.1896999999999996e-05 71562400000.0 32554900.0 29114000.0 26506000.0 25492800.0 28653100.0 27284600.0 25441700.0 27070200.0 31158100.0 26653100.0 True False 30749014.800415803 27715319.73899509 28214619.171099477 27915628.04731018 30907935.956162073 27114306.690691542 28013595.323064093 26976299.794432208 25500574.47178229 26416974.26979804 1.1639870064744884 1.049148152091037 1.0680488568805038 1.0567307126927674 1.1700028792282413 1.0263971344246925 1.0604392099170659 1.0211729594359196 0.9653101907638434 1.0 24.654961897793346 -7.116911960574892 1.2426177469743578 0.9842549726447223 1.0917375717843438 0.49860669518238354 0.04380734138916817 0.42227977878529405 1.1902841296758802 0.034521036049574114 0.01464445554782978 7.639906427405199e-08 7.116911960574892 0.10748259913962155 T(ph)SPQVLGSILK ddPTM_KYSE-520_SHP099_60min_R1 5 TSPQVLGSILK 11 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 T(0.942)S(0.058)PQVLGSILK;T(0.63)S(0.37)PQVLGSILK;T(0.635)S(0.365)PQVLGSILK;T(0.612)S(0.388)PQVLGSILK;T(0.642)S(0.358)PQVLGSILK 232.37 2.1839000000000002e-13 5688960000.0 5310380.0 4945250.0 4530990.0 3963020.0 4240860.0 4731910.0 4595800.0 5029870.0 5643980.0 4699540.0 True False 5015802.635419923 4707672.767028416 4823064.865240324 4339664.229274595 4574591.554807325 4702376.394477107 5060388.3146856595 5012422.554950483 4619175.505157563 4657905.7317868 1.0768364420067025 1.0106844230234184 1.0354578093597804 0.9316771268382614 0.9821133827567792 1.0095473513744229 1.0864084861469416 1.0761107767261937 0.991685055718296 1.0 22.151250011436307 -6.555456867549104 24.82591999027238 1.045334293841964 1.0039893686752366 0.09439530252344586 0.04429122012988123 347.90871816840433 265117.91628186323 0.017489018361924086 0.013547001139730334 2.783191775986559e-07 6.555456867549104 -0.0413449251667275 T(ph)SPRPAS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 3 TSPRPASPAR 10 1 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 2 T(0.64)S(0.367)PRPAS(0.993)PAR;T(0.521)S(0.521)PRPAS(0.957)PAR;T(0.768)S(0.233)PRPAS(0.999)PAR 79.639 0.026924 878870000.0 759660.0 653560.0 615060.0 687210.0 664210.0 701710.0 665140.0 747730.0 715700.0 676750.0 True False 717520.1454553349 622161.9965864402 654707.7517307943 752522.2317827803 716479.5481620637 697330.3676038926 732378.8423408372 745136.2991514946 585746.9213287907 670754.5215035337 1.0697209224128277 0.9275554269717473 0.9760765387957883 1.1219040761677754 1.0681695392168729 1.03962082289179 1.0918731351958226 1.1108926966026706 0.8732657068278963 1.0 19.355425349049316 -3.9171534551092138 20.56254669900148 1.0304084394601432 3.056237404542625 0.024402562402197958 0.07699808691920186 3314.932506894727 766337.7831085711 0.018815628778211926 21384.750930781873 0.00012101704521967911 3.9171534551092138 2.025828965082482 T(ph)SPSGGTWSSVVSGAK ddPTM_KYSE-520_SHP099_60min_R1 3 TSPSGGTWSSVVSGAK 16 0 F8WB06;F8VRK6 F8WB06 ATXN2 1 T(0.976)S(0.024)PSGGTWSSVVSGAK;T(0.5)S(0.5)PSGGTWSSVVSGAK;T(0.5)S(0.5)PSGGTWSSVVSGAK 163.9 4.587e-06 1553910000.0 2066490.0 2048020.0 1803380.0 1704130.0 1671730.0 1796130.0 1795060.0 1846970.0 2403750.0 1857930.0 True False 1951857.6802543157 1949630.045059307 1919628.760310022 1866090.0028346316 1803285.6401574307 1784919.6864294077 1976522.1828973466 1840563.2921560393 1967289.593606373 1841470.1856476685 1.0599453064551367 1.0587356017244436 1.0424435732229158 1.0133696528886804 0.9792640978996856 0.9692905702959447 1.073339225528747 0.9995075166034739 1.0683255199781865 1.0 20.812426608773904 -5.0846895644164825 3.030542885192433 1.0138197442797696 1.0586620877350568 0.24974701751713257 0.031780993202309725 0.3740559132369477 6.632685965581611 0.009156674836225355 0.01859000225736449 8.228306026780444e-06 5.0846895644164825 0.04484234345528715 T(ph)SPSGGTWSSVVSGVPR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPSGGTWSSVVSGVPR 17 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4 Q99700 ATXN2 Ataxin-2 1 T(0.598)S(0.402)PSGGTWSSVVSGVPR 178.03 5.11e-08 5331700000.0 3210700.0 3003200.0 2603200.0 2287200.0 2633500.0 3054700.0 2587700.0 3107600.0 3198700.0 2706100.0 True False 3032596.070628233 2858921.764104898 2771006.437267265 2504574.8003282445 2840741.4674346875 3035634.484216565 2849289.9695182717 3096820.4609192903 2617896.712665087 2682126.059313942 1.1306687320296709 1.0659162548221832 1.0331380315420586 0.9338020454448314 1.0591379393112184 1.1318015697565855 1.0623251504618274 1.154614060799 0.9760528233093995 1.0 21.354945614498405 -7.8312553135591125 24.999999999791676 0.9880247658145652 1.0666804258082883 0.23717850878893432 0.0593402361972555 92.05122501025014 32958.025509335734 0.06086163864703067 0.015714411085163006 1.4748392481105694e-08 7.8312553135591125 0.07865565999372304 T(ph)SPSPDSLGLPEDPCLGPR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPSPDSLGLPEDPCLGPR 19 0 Q6F5E8-2;Q6F5E8 Q6F5E8-2 RLTPR Leucine-rich repeat-containing protein 16C 1 T(0.457)S(0.457)PS(0.085)PDSLGLPEDPCLGPR 73.983 0.049951999999999996 72572000.0 42085.0 48062.0 43964.0 38828.0 55353.0 49623.0 45779.0 45975.0 48133.0 47389.0 True False 39750.461155632445 45753.02937746725 46797.989784887104 42518.20144593614 59708.96618451204 49313.28445028278 50406.7880799849 45815.52345564568 39393.26053418849 46969.17032808408 0.8463096298693745 0.9741076765435289 0.9963554701519898 0.9052363741778382 1.2712374046090082 1.0499075054088638 1.0731888114669417 0.9754382105457672 0.8387046281427339 1.0 15.519426489344207 -1.0909475796037547 7.843526377929139 1.001025794045889 0.004955570368179618 0.0 0.11894295954215017 0.0 0.0 0.028072195601777768 0.0 0.08110589487261666 1.0909475796037547 -0.9960702236777095 T(ph)SPTPGDFPK ddPTM_KYSE-520_SHP099_60min_R1 1 TSPTPGDFPK 10 0 Q9UPU7;C9JW56;Q9UPU7-2 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 T(0.661)S(0.339)PTPGDFPK 163.66 0.00031327 546370000.0 2100800.0 1677700.0 1635700.0 1560800.0 1823800.0 1798800.0 1621300.0 1812300.0 2111000.0 1778700.0 True False 1984264.4361590238 1597100.7737209615 1741139.8392125345 1709137.9627283677 1967322.6839974886 1787573.0219690176 1785196.8263631682 1806013.5542940004 1727695.6139794302 1762942.101807662 1.125541465102243 0.905929225970239 0.9876330240381846 0.9694804843425513 1.1159315339852973 1.0139714855842967 1.012623627589747 1.0244315751732143 0.9800070077218694 1.0 20.74955366405795 -4.218341671001837 23.258276892447455 1.0048154943402103 1.1255424711594495 0.3573503214514051 0.049837044725584194 15614.97615660185 8426386.253306594 0.012764078848220301 5.1137134442267485 6.048648242979137e-05 4.218341671001837 0.12072697681923916 T(ph)SPTPPESATTVK ddPTM_KYSE-520_SHP099_60min_R1 1 TSPTPPESATTVK 13 0 Q5M775-4;Q5M775;J3KSG2 Q5M775-4 SPECC1 Cytospin-B 1 T(0.5)S(0.5)PTPPESATTVK 146.36 4.0035e-05 630490000.0 950130.0 1137300.0 864540.0 719490.0 887790.0 1046300.0 803920.0 975240.0 1337900.0 1033700.0 True False 897424.3948628022 1082662.4008778955 920269.631712909 787870.1132774431 957654.0221658786 1039769.6535947216 885188.0791031145 971857.1200627262 1094971.08571439 1024542.2222064314 0.8759271950063013 1.0567279487479762 0.8982251895202881 0.7689972128046646 0.9347140619578332 1.0148626684759723 0.8639839919889227 0.948576934164564 1.068741787289434 1.0 19.96654800951781 -7.621080237978142 5.434770919763778 1.032158990637083 0.9188949495901194 0.269043534636911 0.07660461517643671 0.29572578459111254 13.203286076328329 0.056721578131342695 0.02035613712517819 2.3928736207422167e-08 7.621080237978142 -0.11326404104696353 T(ph)SPYILR ddPTM_KYSE-520_SHP099_60min_R1 3 TSPYILR 7 0 P49454 P49454 CENPF Centromere protein F 1 T(0.976)S(0.024)PYILR;T(0.5)S(0.5)PYILR;T(0.84)S(0.16)PYILR 194.2 0.00033039 5456100000.0 7516700.0 6630500.0 6403800.0 6094800.0 6283500.0 6245800.0 6096800.0 5501100.0 7184800.0 5873000.0 True False 7099733.666830042 6311960.827416602 6816599.194442272 6674047.959531564 6777975.701775537 6206817.645438123 6713124.043033964 5482017.968066393 5880221.434068885 5820969.78912486 1.2196822735782373 1.084348666301111 1.171041843779625 1.1465525851036855 1.1644066104652564 1.0662858372902277 1.1532655702106354 0.9417705582853702 1.0101789988765657 1.0 22.472828099331778 -7.25535823655143 24.87398472880235 0.9819810809524137 1.1403609932677785 0.7339323542379945 0.04401981374262556 214.12020861205022 875830.2794084053 0.020280125464967824 0.011329547207033245 5.5544589751579286e-08 7.25535823655143 0.15837991231536486 T(ph)SQETADVK ddPTM_KYSE-520_SHP099_60min_R1 1 TSQETADVK 9 0 H3BVG0;Q8N1F7;H3BM93;H3BNN5;H3BV11;H3BRI8 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 T(0.942)S(0.058)QETADVK 111.63 0.0098992 518610000.0 2009000.0 1832700.0 1750200.0 1804200.0 1915200.0 1900700.0 1880700.0 1802400.0 2478000.0 1858500.0 True False 1897556.7651577883 1744654.3410612156 1863020.692419014 1975670.625547492 2065915.3440026264 1888837.0262711325 2070819.5098632015 1796147.8950833234 2028057.665296553 1842035.1358911213 1.0301414604883783 0.9471341273939404 1.0113925929636192 1.0725477419255207 1.1215395970192492 1.0254077077402597 1.1242019598401423 0.9750888352161649 1.1009875033222096 1.0 20.81286914969611 -5.112140628494715 4.344016140932894 1.062467109873438 0.9866897391872448 0.2566626722099029 0.050329191431607405 0.2708757912293515 8.398706484090768 0.013057946096187654 0.02390187507969682 7.72430424614026e-06 5.112140628494715 -0.07577737068619317 T(ph)SQQNVYNPSEGSTWNPFDDDNFSK ddPTM_KYSE-520_SHP099_60min_R1 2 TSQQNVYNPSEGSTWNPFDDDNFSK 25 0 A0A096LP25;A0A096LNZ0;A0A096LP60;Q2M2I8;Q2M2I8-2 A0A096LP25;Q2M2I8 AAK1 AP2-associated protein kinase 1 1 T(0.499)S(0.499)QQNVY(0.002)NPSEGSTWNPFDDDNFSK;T(0.498)S(0.498)QQNVY(0.003)NPSEGSTWNPFDDDNFSK 103.53 0.0023338 148708000.0 289220.0 249502.0 218440.0 233640.0 209884.0 236458.0 205059.0 262940.0 260040.0 221011.0 True False 273176.390054224 237515.54940986302 232520.99191635736 255845.0753535725 226400.67672339545 234982.17791235846 225788.36490298237 262027.9225106576 212823.29107494614 219053.01448395627 1.2470788895453973 1.084283409518014 1.0614827303980676 1.16795961907345 1.0335428492356005 1.0727183027630458 1.0307475815153386 1.19618496521466 0.9715606588492467 1.0 17.74092054278921 -4.262206323172824 4.954920442638257 1.0749728136032421 1.2557060243658245 0.3946110383906566 0.06596562873742752 0.16918349859949006 12.826140787155461 0.015322068918347044 0.10521418407356321 5.467561500965977e-05 4.262206323172824 0.1807332107625823 T(ph)SSEASMDAAYLDK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSEASMDAAYLDK 14 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 T(0.451)S(0.098)S(0.451)EASMDAAYLDK 108.36 0.0057163000000000005 339090000.0 1299700.0 1224000.0 1025900.0 963500.0 1121500.0 1324500.0 1099800.0 1257900.0 1463700.0 1276100.0 True False 1227603.0501122847 1165197.2027385447 1092031.155498037 1055070.750313161 1209755.6695378784 1316233.3042016707 1210978.5170136387 1253536.6384960655 1197928.9768743208 1264794.746790777 0.9705946780907649 0.9212539866211923 0.8634058279170584 0.83418337480468 0.9564837872765112 1.0406694900824116 0.9574506219972144 0.9910988653903907 0.9471331059161039 1.0 20.270471850043727 -5.987269151719847 23.77104265459827 0.9863755031922354 0.8964774897940604 0.520479611822055 0.040760167505681025 107.20396471754108 200168.81014452278 0.013250339270504594 0.015013027618903583 1.029747741901798e-06 5.987269151719847 -0.08989801339817505 T(ph)SSEEEDSRREEPSLLLVLK ddPTM_KYSE-520_SHP099_60min_R1 3 TSSEEEDSRREEPSLLLVLK 20 2 A0A087WZV0;O43314-2;O43314;D6RBU4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 1 T(0.333)S(0.333)S(0.333)EEEDSRREEPSLLLVLK;T(0.333)S(0.333)S(0.333)EEEDSRREEPSLLLVLK;T(0.333)S(0.333)S(0.333)EEEDSRREEPSLLLVLK 231.29 4.2914e-20 820790000.0 895310.0 977680.0 1025890.0 843460.0 846740.0 768770.0 632528.0 767301.0 1176550.0 707970.0 True False 845645.3695437632 930710.7852724005 1092020.5108820365 923622.1848045046 913373.6207084305 763971.8212692481 696470.1031183877 764639.4119203992 962918.1784118897 701697.9365923249 1.2051415936186078 1.3263695626528946 1.556254413665866 1.3162674943721748 1.301662115673408 1.088747424539034 0.9925497379979124 1.0896988177473326 1.372268790026854 1.0 19.42049059447636 -6.142257807706773 3.3471257864476462 1.1067155892866463 1.3599851503986704 0.4572166892017603 0.12714313308916975 0.24143212794577668 5.047189161480414 0.04582846644489499 0.04592200973632984 7.206795393753688e-07 6.142257807706773 0.25326956111202414 T(ph)SSIADEGTYTLDSILR ddPTM_KYSE-520_SHP099_60min_R1 1 TSSIADEGTYTLDSILR 17 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;E7ERV5 A0A087WY00 MYO5A Unconventional myosin-Va 1 T(0.38)S(0.38)S(0.24)IADEGTYTLDSILR 144.18 1.6847e-05 98764000.0 143930.0 151360.0 119890.0 120760.0 120340.0 169750.0 149060.0 192670.0 214040.0 187710.0 True False 135945.9159826583 144088.4384040082 127618.3012307825 132236.99409218205 129810.07335906224 168690.5272844345 164128.43948540933 192001.67273951613 175175.73150931176 186047.0354361702 0.7307072411228998 0.7744731759160046 0.6859464378542399 0.7107718420890962 0.6977271798754247 0.9067090313422895 0.8821878784610852 1.0320060853933297 0.9415669059097251 1.0 17.50530787648012 -6.50655735518143 1.74994955255588 0.9782105596982286 0.7185905921074809 0.8757804737747467 0.04398982711799461 0.11629098526616806 0.7165659396937031 0.020279378638891118 0.015429713860631767 3.1148895003483295e-07 6.50655735518143 -0.2596199675907477 T(ph)SSLDTITGPYLTGQWPR ddPTM_KYSE-520_SHP099_60min_R1 1 TSSLDTITGPYLTGQWPR 18 0 Q86VQ1;H7C2L5;H7C0Q2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 T(0.333)S(0.333)S(0.333)LDTITGPYLTGQWPR 169.37 8.590299999999999e-08 1214300000.0 391910.0 353110.0 288140.0 250670.0 287160.0 352400.0 312010.0 336680.0 386860.0 368410.0 True False 370169.97104678425 336146.06557108415 306713.9654403005 274493.60143331625 309757.85828310065 350200.5408838571 343551.0157241549 335512.1356617024 316615.9759469835 365146.1740186431 1.0137583175878617 0.9205794541720207 0.839975843275961 0.7517362113160236 0.8483119373100305 0.9590694516382283 0.9408588674041929 0.9188433551670525 0.8670937790815197 1.0 18.478114588610005 -6.257903003124354 24.82569794837929 0.9323311613654995 0.8686320440906524 0.16232870489410556 0.0696157004738544 582.5644380104897 4089662.3072685385 0.02558674228505703 0.02459161617214883 5.522007559918872e-07 6.257903003124354 -0.06369911727484712 T(ph)SSLPPLDWPLPAHFGQCELK ddPTM_KYSE-520_SHP099_60min_R1 3 TSSLPPLDWPLPAHFGQCELK 21 0 H3BRS1;Q12968;I3L3K7;H3BR83;Q12968-5;Q12968-6;Q12968-4;Q12968-3;Q12968-2;H3BU30 H3BRS1 NFATC3 Nuclear factor of activated T-cells, cytoplasmic 3 1 T(0.362)S(0.362)S(0.275)LPPLDWPLPAHFGQCELK;T(0.388)S(0.388)S(0.224)LPPLDWPLPAHFGQCELK;T(0.333)S(0.333)S(0.333)LPPLDWPLPAHFGQCELK 214.17 7.8844e-19 983983000.0 886095.0 899973.0 802220.0 724882.0 744491.0 847200.0 749224.0 822020.0 1047285.0 825828.0 True False 836941.5439634105 856736.9461929863 853932.3847973822 793774.5673362804 803078.2061256578 841912.310547117 824962.8736415966 819168.6044809107 857124.4439064182 818511.806404461 1.022516153603095 1.0467007799880612 1.0432743646649592 0.9697777858857701 0.9811443156249637 1.0285890856546702 1.0078814589926 1.0008024295695073 1.0471741973662834 1.0 19.642643701054777 -5.206353609292203 24.998246301019645 1.0051884786043463 1.0384174994976967 0.3271509303874566 0.021309375279749174 367.28035024203797 166673.1521020026 0.005979514977157568 0.01035679629526671 6.217938048607082e-06 5.206353609292203 0.033229020893350336 T(ph)SSPHKEES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSPHKEESPK 11 1 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 T(0.574)S(0.063)S(0.363)PHKEES(1)PK 99.569 0.0014209000000000001 2665300000.0 4105400.0 3885600.0 3176600.0 5627700.0 3841100.0 4410700.0 4258200.0 4208800.0 5495000.0 5056600.0 True False 3877665.2780880015 3698929.943595498 3381368.7187397084 6162554.915970293 4143372.717130583 4383171.185233912 4688660.412027169 4194200.655141303 4497246.517677387 5011802.457975276 0.7737067273905572 0.7380438424322561 0.6746811645297273 1.2296085026583252 0.8267230705666059 0.8745698223318792 0.9355237863707315 0.8368647188931152 0.8973311608722574 1.0 22.25689812075252 T(ph)SSPHKEES(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 3 TSSPHKEESPKK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 T(0.963)S(0.033)S(0.004)PHKEES(1)PKK;T(0.669)S(0.138)S(0.192)PHKEES(1)PKK;T(0.963)S(0.037)SPHKEES(1)PKK 178.99 2.1694e-06 8312200000.0 12609800.0 12155700.0 8729500.0 16017800.0 12505400.0 13252000.0 11595600.0 12404400.0 14261700.0 15027900.0 True False 11910309.256986918 11571721.925922329 9292217.53769385 17540126.89607281 13489503.834007138 13169289.352420209 12767796.41015035 12361372.031608718 11672134.788200116 14894764.4975293 0.7996305855633075 0.7768986161440694 0.6238579696399508 1.1776035061838215 0.905654052888499 0.8841555940414293 0.8572002875418563 0.829913895829584 0.7836401032145393 1.0 23.82830197739733 -5.207410896215 24.99999988592974 0.9079774725101661 0.7378060950844915 0.3664512846725012 0.11144782283063799 388.6717153822904 179844.91220979462 0.031050025633901825 0.0537801895568437 6.202818932444519e-06 5.207410896215 -0.17017137742567467 T(ph)SSPHKEESPK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSPHKEESPK 11 1 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 T(0.511)S(0.245)S(0.245)PHKEESPK 176.87 1.8388e-05 1325700000.0 1112200.0 1069900.0 820160.0 1785600.0 1121200.0 1080400.0 1089000.0 1063000.0 1385700.0 1234500.0 True False 1050504.0488842668 1018500.3980473604 873028.8259023989 1955302.8871397842 1209432.0612446466 1073656.8228459689 1199086.7476157967 1059312.7011060657 1134091.8106543315 1223563.2904264668 0.8585612670008421 0.8324051612339294 0.7135134183358093 1.5980398418607942 0.9884507574782707 0.8774836833097135 0.9799956871849769 0.865760446880396 0.9268762960835883 1.0 20.222657297977133 T(ph)SSSKAS(ph)TLQLGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 TSSSKASTLQLGSPR 15 1 Q7L8L6 Q7L8L6 FASTKD5 FAST kinase domain-containing protein 5 3 T(0.512)S(0.233)S(0.246)S(0.26)KAS(0.375)T(0.375)LQLGS(0.999)PR 51.31 0.053852 1001800000.0 1256100.0 1206700.0 1289100.0 1312300.0 1261100.0 1099400.0 1126000.0 1210200.0 1413800.0 1261900.0 True False 1186421.6290267287 1148728.3207063733 1372197.4486329264 1437020.5974426174 1360341.3953225315 1092538.2367982771 1239827.0687009983 1206002.0986628046 1157089.5589976877 1250720.5477433454 0.9485904994264065 0.9184532250461585 1.0971255338442787 1.148954176882606 1.0876461554717185 0.8735270550799905 0.9912902374059481 0.9642458507927886 0.9251383621108692 1.0 20.254328049138376 -6.248372767692624 24.747964089521016 0.95113378391254 1.0426023159494937 0.27908714894215203 0.07171792949957592 1038.6012230997353 1967095.0505270956 0.026448480911716515 0.02629816701917114 5.644522808792521e-07 6.248372767692624 0.09146853203695371 T(ph)SSVPEYVYNLHLVENDFVGGR ddPTM_KYSE-520_SHP099_60min_R1 5 TSSVPEYVYNLHLVENDFVGGR 22 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 T(0.333)S(0.333)S(0.333)VPEYVYNLHLVENDFVGGR;T(0.333)S(0.333)S(0.333)VPEYVYNLHLVENDFVGGR;T(0.333)S(0.333)S(0.333)VPEYVYNLHLVENDFVGGR;T(0.361)S(0.361)S(0.279)VPEYVYNLHLVENDFVGGR;T(0.333)S(0.333)S(0.333)VPEYVYNLHLVENDFVGGR 261.21 8.721499999999999e-36 382173000.0 133218.90000000002 135222.0 133750.6 120904.9 135466.8 117444.4 113200.5 137018.5 165383.2 116142.59999999999 True False 125828.98205170686 128725.73214764011 142372.37768452635 132395.66534461637 146127.26645934372 116711.38593581182 124643.91127041499 136543.21480385843 135353.77985119974 115113.66692157558 1.0930846476937564 1.1182489064077694 1.2367982142513236 1.1501298576025263 1.2694171801415814 1.0138794902200858 1.0827898598289998 1.1861598926987733 1.1758271929901538 1.0 16.812699602689477 -6.2653401737524534 24.995706000767637 1.102807447342182 1.1726785200538201 0.22840018948709873 0.07377919135253347 652.9328039848582 4183879.346753685 0.026365289730811158 0.0241613957437713 5.42824981515426e-07 6.2653401737524534 0.06987107271163806 T(ph)SVMDRHARK ddPTM_KYSE-520_SHP099_60min_R1 3 TSVMDRHARK 10 2 Q9UKL0 Q9UKL0 RCOR1 REST corepressor 1 1 T(0.5)S(0.5)VMDRHARK;T(0.5)S(0.5)VMDRHARK;T(0.5)S(0.5)VMDRHARK 70.1 0.024671000000000002 2067010000.0 6579100.0 6444200.0 5304000.0 5718400.0 5412300.0 6601700.0 5169800.0 6434000.0 8326400.0 5816200.0 True False 6214144.207889309 6134610.959058597 5645904.326700049 6261875.016700352 5838217.218225469 6560496.341523723 5692413.836385806 6411681.955706884 6814535.651462964 5764672.992935129 1.0779699413141088 1.0641732786190723 0.9793971546381492 1.086249822734883 1.0127577445208897 1.13805177666867 0.9874651768386723 1.1122368889900076 1.182120071652718 1.0 22.4588073411472 T(ph)T(ph)VKPTK ddPTM_KYSE-520_SHP099_60min_R1 2 TTVKPTK 7 1 D6RA06;O75161-2;O75161 D6RA06 NPHP4 Nephrocystin-4 2 T(0.974)T(0.974)VKPT(0.052)K;T(0.988)T(0.988)VKPT(0.025)K 53.751000000000005 0.042205 1180670000.0 1055950.0 847250.0 755410.0 783470.0 977920.0 1141080.0 1036690.0 1035940.0 1037120.0 1080600.0 True False 997374.3485158616 806546.8382518237 804104.9372987351 857930.7532411546 1054876.740396329 1133958.0964578665 1141488.7423193932 1032346.5659302137 848805.1516676202 1071026.7246940795 0.9312319903135419 0.7530594892318864 0.7507795265598195 0.8010358037388916 0.9849210258480119 1.0587579845701445 1.0657892244896503 0.9638849732952143 0.7925153799594188 1.0 20.03056304857442 -5.761290435768019 24.999999937401302 0.9843019166161022 0.8008685032228363 0.48665176662944 0.08450970480984737 3.4006970102341834 570714.8991500135 0.02688334115745321 0.032537453813975846 1.7326448986267622e-06 5.761290435768019 -0.1834334133932659 T(ph)T(ph)VQVS(ph)EPK ddPTM_KYSE-520_SHP099_60min_R1 1 TTVQVSEPK 9 0 Q6PI26-2;Q6PI26 Q6PI26-2 SHQ1 Protein SHQ1 homolog 3 T(1)T(1)VQVS(1)EPK 42.629 0.064401 0.0 295610.0 298960.0 254480.0 303000.0 271120.0 285910.0 265210.0 278660.0 355900.0 285030.0 True False 279211.9240160749 284597.5128518913 270884.18798239663 331797.0288997283 292455.60153821635 284125.5296370708 292020.0150001705 277693.3934997327 291277.53150889586 282504.85594998463 0.9883438041344935 1.0074075077218394 0.9588655992177163 1.1744825687473157 1.0352232727284285 1.0057367993963724 1.0336813999822732 0.9829685672691455 1.03105318501309 1.0 18.10791614053013 T(ph)TDFSDFLSIVGCTK ddPTM_KYSE-520_SHP099_60min_R1 5 TTDFSDFLSIVGCTK 15 0 Q9UHD1;E9PPQ5;E9PIZ4;E9PSD5 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 1 T(0.993)T(0.007)DFSDFLSIVGCTK;T(0.999)T(0.001)DFSDFLSIVGCTK;T(0.794)T(0.206)DFS(0.001)DFLSIVGCTK;T(0.996)T(0.004)DFSDFLSIVGCTK;T(0.993)T(0.007)DFSDFLSIVGCTK 470.49 1.3773999999999997e-131 695685000.0 599255.0 595358.0 567634.0 550156.0 615265.0 580753.0 486109.0 622891.0 699726.0 561632.0 True False 566013.1305647736 566756.1080294232 604224.5958865127 602442.6608295667 663682.8551210196 577128.3051076126 535249.6416866548 620730.3365048522 572673.3970570205 556656.3774230838 1.0168088492671274 1.0181435639938121 1.0854534689490765 1.082252328839634 1.1922666873833208 1.036776597762697 0.961544075295559 1.115105048070022 1.0287736210049077 1.0 19.086427504755253 -9.414950206878405 12.224126477865331 0.999996997156329 1.061850426235076 0.07966932269989935 0.060449124561871806 0.0 0.0 0.061027671734379584 0.014801384508609907 3.846358791361771e-10 9.414950206878405 0.061853429078747135 T(ph)TGTPPDSSLVTYELHSRPEQDK ddPTM_KYSE-520_SHP099_60min_R1 1 TTGTPPDSSLVTYELHSRPEQDK 23 1 Q13561;Q13561-3;Q13561-2;F8VW18;F8W1I6;H0YI98 Q13561 DCTN2 Dynactin subunit 2 1 T(0.312)T(0.312)GT(0.258)PPDS(0.115)S(0.003)LVTYELHSRPEQDK 92.098 0.0055924 1107900000.0 370760.0 287950.0 223280.0 269870.0 320880.0 218840.0 262080.0 331350.0 281470.0 295320.0 True False 350193.20370826346 274116.4497782384 237672.9860606315 295518.3636606256 346131.43044254533 217474.1383854239 288573.6040543139 330200.6241876716 230362.14328128364 292703.6945554833 1.1964085531618829 0.9364980862114757 0.8119917530305704 1.0096161037851497 1.1825318124808792 0.7429839200208684 0.9858898586591414 1.1281054196775113 0.7870148124748643 1.0 18.159081430238942 -6.248608421040546 24.848918714929592 0.9403735646404959 1.0094024645775779 0.09385657849396944 0.14580227167617132 2673.6535785836154 5177903.148890245 0.049374291620795645 0.049046261574276814 5.641460854426989e-07 6.248608421040546 0.06902889993708194 T(ph)TKSPSDSGYSYETIGK ddPTM_KYSE-520_SHP099_60min_R1 3 TTKSPSDSGYSYETIGK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.324)T(0.324)KS(0.324)PS(0.027)DSGYSYETIGK;T(0.33)T(0.33)KS(0.33)PS(0.011)DSGYSYETIGK;T(0.376)T(0.376)KS(0.243)PS(0.005)DSGYSYETIGK 142.99 2.7519000000000002e-05 18971300000.0 3598410.0 3445460.0 3095780.0 2714780.0 3212740.0 3289620.0 2959420.0 3018790.0 4085720.0 2935740.0 True False 3398799.0240475098 3279934.929859106 3295338.9322231375 2972791.8749716314 3465564.360009924 3269088.2613574173 3258587.0547558707 3008318.5220808852 3343856.240619626 2909731.6275711567 1.16807989844912 1.1272293632787602 1.1325233231127432 1.0216721868102705 1.1910254290024467 1.1235016420006496 1.1198926471015866 1.0338817826275002 1.1491974754423817 1.0 21.472454664922694 -13.999999993743245 0.16589896242701285 0.5535189807524487 1.1453369164534788 0.35152792532103605 0.04973595549961178 151.5590262430326 1.4143999165443906 22.225337815818666 0.1896645930243672 1.0000000144067111e-14 13.999999993743245 0.5918179357010301 T(ph)TKTPEDGDYSYEIIEK ddPTM_KYSE-520_SHP099_60min_R1 1 TTKTPEDGDYSYEIIEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.333)T(0.333)KT(0.333)PEDGDYSYEIIEK 83.06299999999999 0.011381 949480000.0 389850.0 385820.0 308250.0 258690.0 313270.0 341350.0 256290.0 311340.0 424460.0 335110.0 True False 368224.24335329223 367284.62807237357 328120.28821743827 283275.8198220157 337922.56673752214 339219.508032647 282198.2943493597 310260.03420730215 347388.7637658498 332141.18611163454 1.108637708150804 1.105808744685241 0.9878940099501998 0.8528777269037785 1.017406394833384 1.0213111839693179 0.8496335478687406 0.9341209316420698 1.0459069163710715 1.0 18.34143710518115 -4.812145330895598 4.313746007396337 0.9554478207725975 1.1095186584603134 0.4500935432905201 0.06379980489111284 0.1700568605690928 6.526092358800628 0.017148005383974433 0.04059547610679394 1.5411846296262553e-05 4.812145330895598 0.1540708376877159 T(ph)TPDKAPK ddPTM_KYSE-520_SHP099_60min_R1 3 TTPDKAPK 8 1 A0A0C4DFT8;G3XAA4;Q9NQC1-2;Q9NQC1;A0A087X085 A0A0C4DFT8 JADE2 Protein Jade-2 1 T(0.918)T(0.082)PDKAPK;T(0.958)T(0.042)PDKAPK;T(0.999)T(0.001)PDKAPK 161.44 0.00068906 2703700000.0 6119900.0 4466700.0 4248200.0 4826900.0 4759700.0 5423300.0 5934800.0 4118600.0 5501000.0 5679500.0 True False 5780416.947281808 4252113.027346612 4522045.7693603225 5285647.124739599 5134261.31101154 5389451.173029011 6534747.502066324 4104313.537888465 4502157.068925076 5629184.048584139 1.0268658649979134 0.7553693378378896 0.8033217124065635 0.9389721634823884 0.9120791337961168 0.9574125000202426 1.1608693987736916 0.7291134030198902 0.7997885714995348 1.0 22.42449438783348 -3.937138594834367 17.821624130885287 0.895728715549194 2.757452791573012 0.09288340656095473 0.12341770095387204 174.79227546868634 68361.08911959537 0.031000021252707097 4710.579563019557 0.00011557433551186706 3.937138594834367 1.8617240760238178 T(ph)TPDQELAPASEPVWERPWSVEEIR ddPTM_KYSE-520_SHP099_60min_R1 5 TTPDQELAPASEPVWERPWSVEEIR 25 1 Q641Q2;E7ESD2;Q641Q2-2;A0A087WYF6;Q5T1D7 Q641Q2 FAM21A WASH complex subunit FAM21A 1 T(0.786)T(0.214)PDQELAPASEPVWERPWSVEEIR;T(0.5)T(0.5)PDQELAPASEPVWERPWSVEEIR;T(0.5)T(0.5)PDQELAPASEPVWERPWSVEEIR;T(0.5)T(0.5)PDQELAPASEPVWERPWSVEEIR;T(0.5)T(0.5)PDQELAPASEPVWERPWSVEEIR 238.12 3.7782e-28 2910770000.0 183186.80000000002 186684.0 158959.5 182618.0 194892.2 195743.0 170247.6 166886.2 203499.0 187180.0 True False 173025.0630301677 177715.42042160316 169206.28371419242 199973.959813896 210229.10735506928 194521.29532982086 187457.8888644583 166307.31072373173 166548.71139232596 185521.73082383635 0.9326404096265414 0.9579223934168352 0.9120564095796606 1.077900464413966 1.1331778030612167 1.0485094897833296 1.010436287070114 0.8964303533888985 0.8977315522701415 1.0 17.501228659210582 T(ph)TPDQELAPASEPVWERPWSVEEIRR ddPTM_KYSE-520_SHP099_60min_R1 10 TTPDQELAPASEPVWERPWSVEEIRR 26 2 Q641Q2;E7ESD2;Q641Q2-2;A0A087WYF6;Q5T1D7 Q641Q2 FAM21A WASH complex subunit FAM21A 1 T(0.5)T(0.5)PDQELAPASEPVWERPWSVEEIRR;T(0.834)T(0.166)PDQELAPASEPVWERPWSVEEIRR;T(0.5)T(0.5)PDQELAPASEPVWERPWSVEEIRR;T(0.5)T(0.5)PDQELAPASEPVWERPWSVEEIRR;T(0.5)T(0.5)PDQELAPASEPVWERPWSVEEIRR;T(0.446)T(0.446)PDQELAPAS(0.04)EPVWERPWS(0.068)VEEIRR;T(0.894)T(0.106)PDQELAPASEPVWERPWSVEEIRR;T(0.572)T(0.428)PDQELAPASEPVWERPWSVEEIRR;T(0.5)T(0.5)PDQELAPASEPVWERPWSVEEIRR;T(0.5)T(0.5)PDQELAPASEPVWERPWSVEEIRR 191.54 2.1213e-15 22634750000.0 2405090.0 2213651.0 2060396.0 1834459.0 1973663.0 1896448.0 1857485.0 1958874.0 2608460.0 1919355.0 True False 2271674.863271952 2107303.8832021086 2193212.4229101613 2008805.4318097886 2128979.049493661 1884611.564580332 2045257.711106639 1952079.1232986266 2134829.4179255236 1902351.007935594 1.194140752046145 1.1077366240044872 1.152895766218352 1.0559594015142966 1.1191305077836298 0.9906749893782679 1.0751211015080362 1.0261403469473265 1.122205843727132 1.0 20.85935203565238 -1.0000000000001448 0.31575202396388813 1.0365758635162652 2.4740356426356933 0.516734214560728 0.04402794907176227 44.081506347117596 0.6298980056440887 0.0397671840584209 36.424026234270464 0.09999999999996667 1.0000000000001448 1.4374597791194281 T(ph)TPDQELVPASEPVWERPWSVEEIR ddPTM_KYSE-520_SHP099_60min_R1 4 TTPDQELVPASEPVWERPWSVEEIR 25 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65 A0A0A0MR88 FAM21C WASH complex subunit FAM21C 1 T(0.5)T(0.5)PDQELVPASEPVWERPWSVEEIR;T(0.5)T(0.5)PDQELVPASEPVWERPWSVEEIR;T(0.5)T(0.5)PDQELVPASEPVWERPWSVEEIR;T(0.5)T(0.5)PDQELVPASEPVWERPWSVEEIR 117.49 0.00074996 4624700000.0 114401.0 87712.2 74739.0 86109.5 113722.9 77006.1 87971.0 45361.0 124422.0 119090.0 True False 108054.94847726042 83498.37425330376 79556.79552662818 94293.32099023489 122672.24523521103 76525.4763659376 96863.96719422344 45203.65327833699 101830.1012233769 118034.95525061805 0.9154487181177173 0.7074037862429448 0.6740104688285685 0.7988592937577376 1.0392874295139676 0.648328931064994 0.8206379795591633 0.382968360367132 0.8627113977140572 1.0 16.84885464164059 T(ph)TPDQELVPASEPVWERPWSVEEIRR ddPTM_KYSE-520_SHP099_60min_R1 3 TTPDQELVPASEPVWERPWSVEEIRR 26 2 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65 A0A0A0MR88 FAM21C WASH complex subunit FAM21C 1 T(0.5)T(0.5)PDQELVPASEPVWERPWSVEEIRR;T(0.5)T(0.5)PDQELVPASEPVWERPWSVEEIRR;T(0.784)T(0.111)PDQELVPAS(0.003)EPVWERPWS(0.102)VEEIRR 167.97 2.6364999999999996e-10 8458400000.0 1087030.0 994070.0 855180.0 864950.0 891100.0 866430.0 850010.0 867870.0 1182620.0 841800.0 True False 1026730.2789594178 946313.38507051 910306.2711363788 947154.5879432993 961224.5003345564 861022.2889841113 935937.3060981666 864859.5615323811 967886.0194241379 834342.3069104889 1.2305863797813732 1.1342028052906032 1.091046520830496 1.1352110280138454 1.152074505119971 1.0319772614341187 1.1217665679256719 1.0365764199767065 1.160058661064608 1.0 19.670279876288042 -1.0000000000000002 0.13085194752074011 1.0040816885464932 1.5977296820263498 0.4456270182763251 0.049450714172897606 81.80904933353597 0.7250200877572371 0.25373938439645555 8.970839303148768 0.09999999999999995 1.0000000000000002 0.5936479934798566 T(ph)TPLKPSPLPVIPDTIK ddPTM_KYSE-520_SHP099_60min_R1 1 TTPLKPSPLPVIPDTIK 17 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 T(0.888)T(0.112)PLKPSPLPVIPDTIK 173.65 5.4507000000000006e-08 1032500000.0 2003100.0 1844700.0 1547100.0 1365600.0 1559500.0 2082500.0 1513200.0 1737700.0 2262700.0 2049300.0 True False 1891984.0499191487 1756077.8430488494 1646828.5414475212 1495386.213417389 1682223.77765878 2069502.3450358477 1666169.0234088353 1731672.3242822269 1851850.718025227 2031144.7963312748 0.9314865455857785 0.8645754090110853 0.8107883516832876 0.7362282669942626 0.8282146012914844 1.018884694372285 0.8203103128926743 0.8525597620662172 0.9117275742084489 1.0 20.953861659525923 T(ph)TPNSGDVQVTEDAVR ddPTM_KYSE-520_SHP099_60min_R1 1 TTPNSGDVQVTEDAVR 16 0 P35269;M0QXD6 P35269 GTF2F1 General transcription factor IIF subunit 1 1 T(0.607)T(0.393)PNSGDVQVTEDAVR 189.45 1.6065999999999998e-07 0.0 129750.0 133650.0 97209.0 102100.0 115680.0 122970.0 115710.0 143600.0 153780.0 104460.0 True False 122552.50884978758 127229.25338726003 103475.24767989932 111803.55330251572 124783.35787083524 122202.49861659454 127407.09602077481 143101.88511649185 125857.42847833096 103534.56566865015 1.1836868977844759 1.2288577497339572 0.9994270706756943 1.079866927344144 1.2052337986348374 1.1803062854166875 1.2305754623873713 1.3821653106120337 1.215607827835222 1.0 16.659752975431882 -5.887700807332096 5.641529754736088 1.2237720472689393 1.122081670777068 0.10352828011328119 0.10452785201805771 0.39134868868759537 17.912648814076846 0.03330227738229214 0.03799090694350687 1.2950877416062348e-06 5.887700807332096 -0.10169037649187129 T(ph)TPPESAPQNGPSPMAALMSVADTLGTAHSPK ddPTM_KYSE-520_SHP099_60min_R1 3 TTPPESAPQNGPSPMAALMSVADTLGTAHSPK 32 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 T(0.484)T(0.484)PPES(0.03)APQNGPS(0.002)PMAALMSVADTLGTAHSPK;T(0.499)T(0.499)PPES(0.001)APQNGPSPMAALMSVADTLGTAHSPK;T(0.5)T(0.5)PPESAPQNGPSPMAALMSVADTLGTAHSPK 206.93 1.4856e-16 695077000.0 377909.0 471507.0 350622.0 421384.0 321413.0 406524.0 311615.0 391672.0 531580.0 374011.0 True False 356945.6344270857 448855.09597356414 373223.6551350356 461432.20866628096 346706.37451018987 403986.73292357905 343116.08526932687 390313.38124893175 435058.4720413007 370697.5535161549 0.9629025901071401 1.2108391105257272 1.0068144545193785 1.2447673427825088 0.9352809891017544 1.0898014542898067 0.9255957640259257 1.052915989185027 1.1736211040905642 1.0 18.49988306830508 -5.7836998479214685 24.999993623924986 1.0299980088681306 1.1066875936653446 0.11772327261249582 0.1029867430641148 516.9091513046145 580520.1828735918 0.030362541048657186 0.03445296213585417 1.6455085835873837e-06 5.7836998479214685 0.076689584797214 T(ph)TPTMSEEPPLDLTGK ddPTM_KYSE-520_SHP099_60min_R1 6 TTPTMSEEPPLDLTGK 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.498)T(0.498)PT(0.004)MSEEPPLDLTGK;T(0.5)T(0.5)PTMSEEPPLDLTGK;T(0.473)T(0.473)PT(0.053)MSEEPPLDLTGK;T(0.5)T(0.5)PTMSEEPPLDLTGK;T(0.499)T(0.499)PT(0.001)MSEEPPLDLTGK;T(0.5)T(0.5)PTMSEEPPLDLTGK 171.21 1.6581e-07 2813270000.0 5530030.0 6297960.0 4529970.0 3843120.0 4456640.0 5565880.0 4347980.0 5570220.0 6576380.0 5996120.0 True False 5223268.212058507 5995396.548169317 4821979.114408267 4208368.969323845 4807352.213187059 5531141.278361638 4787516.250595525 5550898.2069191225 5382275.169048808 5942999.04171077 0.8788943385989376 1.008816677588335 0.8113713430820607 0.7081221012804355 0.8089101444315899 0.9306986656974837 0.8055724419597712 0.9340230694907237 0.9056496780957666 1.0 22.502759717642874 -7.907994059205075 1.0354150665980724 0.9965238856206446 0.8500245274179445 0.251955234445872 0.07831035219682599 0.7979408111107197 1.9129555302978185 0.08078886678867628 0.027039488153617616 1.2359643403147703e-08 7.907994059205075 -0.1464993582027001 T(ph)TPTQPSEQK ddPTM_KYSE-520_SHP099_60min_R1 4 TTPTQPSEQK 10 0 O95104-2;O95104-3;O95104 O95104-2 SCAF4 Splicing factor, arginine/serine-rich 15 1 T(0.644)T(0.356)PTQPSEQK;T(0.635)T(0.365)PTQPSEQK;T(0.685)T(0.315)PTQPSEQK;T(0.649)T(0.351)PTQPSEQK 244.73 4.4221000000000004e-13 1759050000.0 4405350.0 4404360.0 3634710.0 3160730.0 3566170.0 4115200.0 3481220.0 4158840.0 4902290.0 4243020.0 True False 4160976.4536525016 4192767.9345208546 3869009.222341617 3461124.8288918706 3846807.2902682987 4089515.5103440685 3833135.6910331184 4144413.9547205498 4012157.712674191 4205430.143819605 0.9894294546225114 0.9969890810533711 0.9200032077640382 0.8230132734408673 0.9147238590852956 0.9724369138206024 0.9114729195220092 0.9854910943679028 0.9540421729678589 1.0 22.003821940462775 -7.619820750623918 1.091779128176845 0.9937754579283014 0.9302626488302098 0.1498845572587698 0.048518813995208555 1.0073882167062862 2.303660737945932 0.049995960272750356 0.01728187556540118 2.3998232103320075e-08 7.619820750623918 -0.06351280909809154 T(ph)TPVDLCLLEESVGSLEGSR ddPTM_KYSE-520_SHP099_60min_R1 12 TTPVDLCLLEESVGSLEGSR 20 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 T(0.5)T(0.5)PVDLCLLEESVGSLEGSR;T(0.5)T(0.5)PVDLCLLEESVGSLEGSR;T(0.5)T(0.5)PVDLCLLEESVGSLEGSR;T(0.5)T(0.5)PVDLCLLEESVGSLEGSR;T(0.5)T(0.5)PVDLCLLEESVGSLEGSR;T(0.5)T(0.5)PVDLCLLEESVGSLEGSR;T(0.5)T(0.5)PVDLCLLEESVGSLEGSR;T(0.5)T(0.5)PVDLCLLEESVGSLEGSR;T(0.5)T(0.5)PVDLCLLEESVGSLEGSR;T(0.5)T(0.5)PVDLCLLEESVGSLEGSR;T(0.5)T(0.5)PVDLCLLEESVGSLEGSR;T(0.5)T(0.5)PVDLCLLEESVGSLEGSR 202.34 8.538200000000001e-13 1654990000.0 535302.0 606046.0 446873.6 404797.7 432554.8 550489.0 396894.8 516710.0 701120.0 534321.0 True False 505607.73096191935 576930.6404664081 475679.7872790404 443269.55170113384 466594.40185985196 547053.1939574733 437016.79970396915 514917.653611021 573814.2817969011 529587.3316354482 0.9547202147009898 1.089396603738153 0.8982083952236303 0.8370093565725004 0.881052800902423 1.0329801361903574 0.8252025182596291 0.9722997942962025 1.0835120999304746 1.0 19.014509085997894 -7.545108322445558 9.740689006068559 1.037482669170415 0.9318619046836939 0.23316909111283668 0.07948354667973112 0.5094488422218263 206.87329069902268 0.055110065987470314 0.0210721288229398 2.8503072505032724e-08 7.545108322445558 -0.1056207644867212 T(ph)TRTPDTSTYCYETAEK ddPTM_KYSE-520_SHP099_60min_R1 1 TTRTPDTSTYCYETAEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.455)T(0.455)RT(0.082)PDT(0.006)S(0.001)T(0.002)YCYETAEK 122.3 0.00011802 0.0 408350.0 396410.0 329660.0 307780.0 348730.0 350620.0 319410.0 344910.0 466890.0 353200.0 True False 385698.01147445693 377365.8685764593 350910.41107464937 337031.318662569 376173.06699772173 348431.6505241149 351699.0799411952 343713.58771259955 382114.5453391074 350070.9227854415 1.1017710594342942 1.0779697598813338 1.0023980520362223 0.9627515361198266 1.074562445816953 0.9953173138509098 1.0046509351385107 0.9818398654128199 1.0915346590305228 1.0 18.417287709595453 -4.667869235917806 4.52847246237975 1.0128370070986825 1.0957413310893869 0.3964130902685522 0.03771681349465557 0.19354466310950702 6.820518074802686 0.009446900164178377 0.026851027878955967 2.148477273432159e-05 4.667869235917806 0.08290432399070435 T(ph)TSPGGRPSAR ddPTM_KYSE-520_SHP099_60min_R1 1 TTSPGGRPSAR 11 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 T(0.858)T(0.027)S(0.113)PGGRPS(0.002)AR 117.95 0.004209 902320000.0 488220.0 464480.0 445910.0 396690.0 441310.0 474200.0 466040.0 498840.0 612310.0 511580.0 True False 461137.46335755906 442165.68360130634 474654.0720812257 434391.298330802 476038.5862895782 471240.3419044411 513151.87131208956 497109.64047013083 501129.939078988 507047.7992032169 0.9094556057282921 0.8720394493302853 0.9361130702610381 0.8567068016337148 0.9388436100849523 0.9293805093818686 1.0120384549907615 0.9803999568705296 0.9883287924066955 1.0 18.951762230389168 -6.44667864118302 1.7230331858830352 0.9940012077799619 0.8968723964464511 0.7466612972260642 0.02532774523101397 0.17180493581139242 1.0192827179967956 0.010840120126760916 0.00861627431130959 3.575373021736366e-07 6.44667864118302 -0.09712881133351081 T(ph)TSRS(ph)PVLSR ddPTM_KYSE-520_SHP099_60min_R1 1 TTSRSPVLSR 10 1 O95819-3;E7EX83;G5E948;C9J840;H7C360;E7ENQ1;H7C0P6;G3XAA2;A0A0D9SG62;A0A0D9SEY1;O95819-4;O95819-2;O95819;O95819-5;O95819-6;E7EN19;H7C3Z6 O95819-3 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 2 T(0.807)T(0.086)S(0.207)RS(0.9)PVLSR 122.97 0.00079858 382060000.0 592470.0 542350.0 483730.0 541390.0 524190.0 550890.0 500870.0 508320.0 683290.0 509210.0 True False 559604.5080403357 516294.691916053 514912.00979536504 592843.5428251612 565440.7707668841 547451.6911677301 551502.8276201327 506556.7565627797 559221.7603391779 504698.79555938474 1.1087890697660494 1.0229758748360316 1.0202362564084593 1.1746482219520278 1.1203529228560487 1.0847097238679955 1.0927365638130215 1.0036813264064475 1.1080307012014214 1.0 18.945063118151463 -12.1587245339167 16.337518350130594 1.0036346546394932 1.0757731774756134 0.0 0.055742764211574564 0.0 0.0 0.0 0.012872853097009283 6.938657744955504e-13 12.1587245339167 0.07213852283612021 T(ph)VGTRRQLGLVPR ddPTM_KYSE-520_SHP099_60min_R1 3 TVGTRRQLGLVPR 13 2 P52948-2;P52948-5;P52948;A0A3B3ITD8 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 T(0.5)VGT(0.5)RRQLGLVPR;T(0.5)VGT(0.5)RRQLGLVPR;T(0.5)VGT(0.5)RRQLGLVPR 63.037 0.025733 9476300000.0 16515200.0 11281800.0 12816800.0 5267190.0 13332600.0 13244300.0 13125700.0 13424200.0 15224100.0 12509800.0 True False 15599068.933765022 10739805.393672973 13642991.435605064 5767782.153961588 14381799.767882936 13161637.410976375 14452573.850487292 13377634.583431829 12459787.208329823 12398972.90447714 1.2580936383958352 0.8661850845560717 1.1003323856509697 0.46518225327187396 1.1599186383163897 1.061510297052415 1.165626698423433 1.0789308668140813 1.0049047856077435 1.0 23.563717281034243 T(ph)VHRDSEEEDDYLFDDPLPIPLR ddPTM_KYSE-520_SHP099_60min_R1 8 TVHRDSEEEDDYLFDDPLPIPLR 23 1 B3KSJ7;Q96SD1-2;Q96SD1-3;Q96SD1 B3KSJ7 DCLRE1C Protein artemis 1 T(0.564)VHRDS(0.436)EEEDDYLFDDPLPIPLR;T(0.639)VHRDS(0.361)EEEDDYLFDDPLPIPLR;T(0.477)VHRDS(0.477)EEEDDY(0.046)LFDDPLPIPLR;T(0.568)VHRDS(0.432)EEEDDYLFDDPLPIPLR;T(0.463)VHRDS(0.463)EEEDDY(0.074)LFDDPLPIPLR;T(0.468)VHRDS(0.468)EEEDDY(0.063)LFDDPLPIPLR;T(0.5)VHRDS(0.5)EEEDDYLFDDPLPIPLR;T(0.591)VHRDS(0.409)EEEDDYLFDDPLPIPLR 158.89 5.4339e-10 780785000.0 413840.0 420788.5 399672.0 375549.5 384225.3 374825.4 356420.4 383563.1 492934.8 355328.2 True False 390883.47023041255 400573.188843585 425435.4966178097 411241.61156692565 414461.64516709046 372485.9756441774 392450.8523598911 382232.609130401 403430.26619508595 352180.26858915674 1.1098959967186743 1.1374095160080704 1.2080049183962387 1.1677020215083889 1.1768451617901097 1.057657140010614 1.114346507633887 1.0853322665169025 1.1455220583800394 1.0 18.42595455678596 -6.254027559680814 24.70165093737773 1.0880157927305454 1.1618160745848065 0.45721836850640263 0.042849982414628 488.88428316697093 1629325.0891243953 0.01404086209053427 0.013777521555019401 5.571503918762568e-07 6.254027559680814 0.07380028185426113 T(ph)VLSLFDEEEDKMEDQNIIQAPQK ddPTM_KYSE-520_SHP099_60min_R1 1 TVLSLFDEEEDKMEDQNIIQAPQK 24 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;B1AP61;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 T(0.5)VLS(0.5)LFDEEEDKMEDQNIIQAPQK 151.31 9.5056e-07 68736000.0 202410.0 179700.0 124590.0 150790.0 124810.0 146450.0 130190.0 188840.0 184150.0 165260.0 True False 191181.9138056684 171066.94226480095 132621.27075104817 165121.03626333323 134631.83692824136 145535.95122713083 143350.8757319563 188184.9581155875 150713.00204372912 163795.92497033457 1.1671957885417097 1.0443907093279838 0.8096738107194517 1.0080900137975877 0.8219486348798044 0.88851997541141 0.8751797442941202 1.1488989005658723 0.920126688567039 1.0 17.321539939485206 -10.275444804522202 19.505003517280095 0.9999999991016187 0.9602580760024828 0.0063402888995387485 0.11982282760022227 0.0 0.0 0.11829699156848077 0.028691235003745656 5.3034099059423716e-11 10.275444804522202 -0.039741923099135934 T(ph)VSPSTIR ddPTM_KYSE-520_SHP099_60min_R1 1 TVSPSTIR 8 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 T(0.867)VS(0.132)PSTIR 134.66 0.0034961999999999997 1129800000.0 1400200.0 1305300.0 1117700.0 917970.0 1085200.0 1153000.0 937280.0 1020600.0 1495000.0 1062600.0 True False 1322528.1147705002 1242591.4287047572 1189748.7303832292 1005213.5928022566 1170599.0660566268 1145803.699316367 1032029.4093712899 1017059.7768098305 1223545.6858831102 1053186.1906902906 1.2557400832455603 1.1798402216898842 1.1296660940867742 0.9544500314264552 1.111483493046353 1.0879402991083391 0.9799116419242698 0.9656979799015577 1.1617562940899944 1.0 20.00632907942006 -4.817133073544471 2.153577383697006 1.0386492173060515 1.2391865698579436 0.5515318246643328 0.0656943181479839 0.24313400998378581 2.1895181971448303 0.01831254926145654 0.060928735750486435 1.5235858355159488e-05 4.817133073544471 0.2005373525518921 T(ph)VT(ph)SFTK ddPTM_KYSE-520_SHP099_60min_R1 2 TVTSFTK 7 0 Q9BQG1 Q9BQG1 SYT3 Synaptotagmin-3 2 T(0.667)VT(0.667)S(0.667)FTK;T(0.667)VT(0.667)S(0.667)FTK 86.113 0.018798 63278000.0 145575.0 443710.0 557900.0 36382.0 117305.0 376950.0 69617.0 57205.0 78524.0 321310.0 True False 137499.66455343217 422393.5055777117 593863.1266715608 39839.73434135285 126536.23612585025 374597.31522749667 76654.56575644524 57006.56920674739 64266.02102895338 318463.4433753972 0.4317596490701472 1.3263484847766474 1.8647764414565127 0.1250998667824825 0.39733363046223275 1.176264726830609 0.2407013029312964 0.17900506445114767 0.20180030821684644 1.0 18.2807682485261 -5.276644154359512 24.98339609190235 0.4564133088420304 1.2195002809612459 0.34241382496649075 0.4651429872679351 860.5457018312893 1413985.0558348026 0.13380850725880084 0.19932185755820997 5.288784186853605e-06 5.276644154359512 0.7630869721192155 T(ph)WSEKDLR ddPTM_KYSE-520_SHP099_60min_R1 4 TWSEKDLR 8 1 F5H0D8;E9PKU1;G5EA30;Q92879-4;E9PKA1;F5H4Y5;E9PQK4;E9PSH0;Q92879-5;Q92879-2;Q92879-3;Q92879-6;Q92879 F5H0D8 CELF1 CUGBP Elav-like family member 1 1 T(0.5)WS(0.5)EKDLR;T(0.5)WS(0.5)EKDLR;T(0.5)WS(0.5)EKDLR;T(0.673)WS(0.327)EKDLR 116.77 0.002716 2780150000.0 5981020.0 5095430.0 4768850.0 4874470.0 5194840.0 4642370.0 4578290.0 5021290.0 5986920.0 4672040.0 True False 5649240.897732224 4850637.894403641 5076257.701429783 5337738.163237158 5603644.353403611 4613395.246830285 5041108.233004521 5003872.316967892 4899846.245971442 4630649.360392122 1.2199673216574205 1.0475070593539588 1.096230205821485 1.152697547970931 1.210120636931382 0.9962739321812144 1.0886395925641068 1.0805984058668106 1.0581337226441445 1.0 22.142783087502597 -6.268194701574894 24.996047909092933 1.0525109372850638 1.1375557295707541 0.45018236547382495 0.054908086882299485 622.569989565123 2303624.550109683 0.01947901689939819 0.017546677245989312 5.39268804971124e-07 6.268194701574894 0.08504479228569028 T(ph)YSAPAINAIQVPKPFSGPVR ddPTM_KYSE-520_SHP099_60min_R1 2 TYSAPAINAIQVPKPFSGPVR 21 1 Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-6 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.494)Y(0.011)S(0.494)APAINAIQVPKPFSGPVR;T(0.5)YS(0.5)APAINAIQVPKPFSGPVR 178.53 3.1821e-09 3828650000.0 1053920.0 1092010.0 959440.0 740760.0 820080.0 888320.0 766550.0 800240.0 1286640.0 671110.0 True False 995456.9566625672 1039548.2004595723 1021287.0375582764 811161.6076823849 884615.6303830799 882775.6653744275 844040.3548070607 797464.1542174194 1053018.609554948 665164.4875156793 1.4965575813893734 1.5628438077657716 1.5353902030649262 1.219490250767881 1.329920112973902 1.327153932512999 1.2689197493983244 1.1988976699520832 1.5830950529061825 1.0 19.343351621034554 -1.000001408227954 0.03386078749060123 4.703907280209623e-10 3.413699686695463 0.4498627983531239 0.13377553011937446 1018.6431526198194 2.644179314246838 80.19400551290867 217.55979759859815 0.09999967574405626 1.000001408227954 3.413699686225072 T(ph)YTHEVVTLWYR ddPTM_KYSE-520_SHP099_60min_R1 1 TYTHEVVTLWYR 12 0 G3V5T9;P24941;Q00526;K7EJ83 G3V5T9 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 T(0.577)YT(0.423)HEVVTLWYR 119.87 0.00017076 606620000.0 435620.0 435730.0 373550.0 352690.0 351210.0 334300.0 285360.0 340270.0 394520.0 345630.0 True False 411455.2902130594 414796.8767559356 397629.63070113276 386209.5515598849 378848.22888845176 332213.5096977114 314206.97364521923 339089.6827896147 322885.1130398696 342567.9870960714 1.201090894980998 1.2108454157440227 1.1607320172320117 1.1273953378824462 1.1059066905227362 0.9697739491476296 0.9172105552206824 0.9898463825066023 0.942543159905126 1.0 18.386030812619794 -5.993222531414995 1.443151368253438 0.9555953308779763 1.1902884819375736 0.9226310042296836 0.029204781359244307 0.10240228764298594 0.4382123976177171 0.012318613767290293 0.01387684349792566 1.0157281029477758e-06 5.993222531414995 0.23469315105959732 TAAAAAEHSQR ddPTM_KYSE-520_SHP099_60min_R1 2 TAAAAAEHSQR 11 0 O43242 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 0 ; 122.7 0.00018854 0.0 305250.0 284790.0 222340.0 193516.0 275890.0 316260.0 244970.0 281990.0 268960.0 260590.0 False True 288317.1739992108 271108.2609214948 236672.3921565782 211907.7024572931 297600.97340062895 314286.1040293093 269733.95827680634 281011.8425069611 220123.6439298471 258281.37533595212 1.1162909970732133 1.0496624488268211 0.9163354959246803 0.8204528963099265 1.152235514517967 1.216836109922795 1.0443414974306902 1.0880066057470963 0.8522629386014674 1.0 17.978584088937154 -4.355422026002052 4.2628800846557535 1.0192859310637734 1.1164056062568835 0.06430517992669549 0.11862219534569346 0.7290155076601977 21.147688038394467 0.032203659216011225 0.1612095313704622 4.4114155934602854e-05 4.355422026002052 0.09711967519311004 TAAARTRT(ph)AGS(ph)SGVT(ph)AGR ddPTM_KYSE-520_SHP099_60min_R1 1 TAAARTRTAGSSGVTAGR 18 2 P28300 P28300 LOX Protein-lysine 6-oxidase 3 TAAART(0.003)RT(0.848)AGS(0.96)S(0.441)GVT(0.748)AGR 87.419 0.012256 0.0 775760.0 737920.0 652770.0 666930.0 680490.0 773900.0 640770.0 777130.0 927130.0 740750.0 True False 732727.0463607806 702469.2155594979 694848.5986689277 730314.8266801841 734040.6915415354 769069.8030363711 705545.2849125561 774434.317413506 758786.5630453572 734187.5312947801 0.9980107467482813 0.956798073539406 0.9464184136218221 0.9947251833495916 0.9997999969394935 1.0475113921916845 0.9609878332696391 1.0548181280711053 1.0335051069407233 1.0 19.485789087795634 -5.6585567861634365 2.3211599135776777 1.018886163468925 0.9665727237528845 0.37842814126387103 0.028063658304980352 0.3006602732031863 3.3032498412468403 0.009020596264546389 0.012341558022018972 2.1950439174657713e-06 5.6585567861634365 -0.05231343971604052 TAADKDRGEEDADGSK ddPTM_KYSE-520_SHP099_60min_R1 2 TAADKDRGEEDADGSK 16 2 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13;C9J2Z7;C9K073 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ; 185.33 3.1608e-12 2400800000.0 2538500.0 2626500.0 1709530.0 1424740.0 2231600.0 2306800.0 1641650.0 2022000.0 2218030.0 2041440.0 False True 2397684.3446257077 2500318.9975431277 1819729.0391447113 1560146.861236299 2407214.2239328832 2292402.405535985 1807604.0029600319 2014986.1539383454 1815291.663986164 2023354.4298162868 1.1850046187129997 1.2357296184485818 0.8993624707214228 0.7710694865150021 1.1897145593772465 1.1329712539508594 0.8933699288286114 0.9958641571863901 0.897169392191454 1.0 20.948317627406546 -4.753754452840239 24.99211917827128 0.9757697518737783 1.210367224819085 0.4040345609046778 0.11552928621507592 180.7240390419868 587718.1172360202 0.03143929985191834 0.07988325554511091 1.76297253741724e-05 4.753754452840239 0.23459747294530675 TAADVVS(ph)PGANSVDSR ddPTM_KYSE-520_SHP099_60min_R1 1 TAADVVSPGANSVDSR 16 0 Q01804-5;Q01804-3;Q01804 Q01804-5 OTUD4 OTU domain-containing protein 4 1 TAADVVS(1)PGANSVDSR 229.22 1.2919e-18 546350000.0 332140.0 364170.0 277890.0 276880.0 271960.0 372110.0 300560.0 330340.0 405990.0 380930.0 True False 313715.5320953251 346674.72656968597 295803.2340397206 303194.5919529928 293361.70475927036 369787.5234628043 330943.5379829239 329194.1276419354 332272.45017503947 377555.2565590555 0.8309128972390699 0.9182092436725502 0.7834700455122717 0.8030469360067524 0.7770033648396154 0.9794262350707434 0.8765433197753909 0.8719097984282583 0.8800631017649914 1.0 18.52632827789415 -6.252768619247101 24.999202553315254 0.9107675312862825 0.8245918728087493 0.4476237129993452 0.05433641661302757 718.1275333412527 2070478.7114371473 0.01850865942088289 0.01823237041250596 5.587678123395192e-07 6.252768619247101 -0.08617565847753317 TAAILHGGS(ph)PDFVGNGK ddPTM_KYSE-520_SHP099_60min_R1 1 TAAILHGGSPDFVGNGK 17 0 H0YME5;Q9P2K8-2;Q9P2K8;Q9P2K8-3 H0YME5 EIF2AK4 Eukaryotic translation initiation factor 2-alpha kinase 4 1 TAAILHGGS(1)PDFVGNGK 143.57 0.00036361 0.0 487760.0 386210.0 412780.0 393590.0 368700.0 463740.0 305150.0 367880.0 400550.0 395620.0 True False 460702.98047454644 367655.891886971 439388.45927135187 430996.675262851 397714.5923839645 460845.6266443808 335997.53997700644 366603.9101438378 327820.2170437993 392115.1145877027 1.1749176793630152 0.9376223415247591 1.1205598634813037 1.0991585359213483 1.0142801886179509 1.1752814658239996 0.856884949029057 0.9349395024706223 0.8360305554364882 1.0 18.580917727922156 -6.771858657608576 24.99998354618769 0.9015420175102584 1.0789582384536651 0.5552779875654883 0.0786636097785463 156.35995138980516 375165.7727871237 0.030677529099847237 0.020930634628422394 1.6909911800539632e-07 6.771858657608576 0.1774162209434067 TAANKS(ph)PCETISS(ph)PSSTLESK ddPTM_KYSE-520_SHP099_60min_R1 4 TAANKSPCETISSPSSTLESK 21 1 Q9C0D5 Q9C0D5 TANC1 Protein TANC1 2 T(0.003)AANKS(0.994)PCET(0.003)IS(0.039)S(0.959)PS(0.002)STLESK;T(0.004)AANKS(0.987)PCET(0.009)IS(0.022)S(0.972)PS(0.004)S(0.001)TLESK;T(0.027)AANKS(0.963)PCET(0.01)IS(0.061)S(0.887)PS(0.037)S(0.012)T(0.004)LESK;T(0.004)AANKS(0.995)PCET(0.001)IS(0.192)S(0.803)PS(0.003)S(0.001)T(0.001)LESK 155.45 1.9922e-07 5050760000.0 5399760.0 4699210.0 4429630.0 4602890.0 4940170.0 4524090.0 4372140.0 4718490.0 5600110.0 4461270.0 True False 5100224.548645305 4473452.89794199 4715171.03745859 5040347.281690664 5328933.273277707 4495853.4761840245 4814118.579174409 4702122.659493844 4583271.1912848605 4421746.618615538 1.1534411599193355 1.011693632355316 1.0663593923739856 1.1398996180538294 1.2051647760283044 1.016759634587947 1.0887368712867866 1.0634084367697425 1.0365295858404244 1.0 22.076184925428038 -7.674924144372371 0.8842914731435754 1.0018151358324052 1.1007747627115303 0.26840879893151826 0.055502895111526 0.8389895045486317 1.3558807694799209 0.05480405614333616 0.020496046192453668 2.1138582226058804e-08 7.674924144372371 0.09895962687912507 TAANKS(ph)PCETISSPSSTLESK ddPTM_KYSE-520_SHP099_60min_R1 8 TAANKSPCETISSPSSTLESK 21 1 Q9C0D5 Q9C0D5 TANC1 Protein TANC1 1 T(0.006)AANKS(0.992)PCET(0.002)ISSPSSTLESK;T(0.003)AANKS(0.996)PCET(0.001)ISSPSSTLESK;T(0.001)AANKS(0.959)PCET(0.04)ISSPSSTLESK;TAANKS(0.937)PCET(0.063)ISSPSSTLESK;TAANKS(0.968)PCET(0.032)ISSPSSTLESK;T(0.001)AANKS(0.993)PCET(0.006)ISSPSSTLESK;TAANKS(0.955)PCET(0.045)ISSPSSTLESK;TAANKS(1)PCETISSPSSTLESK 297.14 1.5662e-44 11272650000.0 6077840.0 5997050.0 4929020.0 4336110.0 4655580.0 5887090.0 4872910.0 5865760.0 7080130.0 5772780.0 True False 5740690.099326339 5708942.716244434 5246752.515910839 4748212.590700989 5021947.659373306 5850346.487604838 5365511.297818629 5845413.047638678 5794556.8675529035 5721637.660354883 1.0033298926115977 0.9977812394170968 0.9170018843146055 0.8298695011047732 0.8777115849488833 1.0224951027818094 0.9377579665689341 1.0216328601409754 1.012744464352099 1.0 22.447996706943155 -6.271103405891567 24.831574943700776 0.9964551261320523 0.9234297177738118 0.32769782067075015 0.05275645251211334 891.869691056065 2291639.2252368415 0.020879790676409587 0.018643834542695276 5.356690990525112e-07 6.271103405891567 -0.07302540835824056 TAAPS(ph)PSLLYK ddPTM_KYSE-520_SHP099_60min_R1 4 TAAPSPSLLYK 11 0 Q9BTC0;Q9BTC0-1;Q9BTC0-2;Q9BTC0-3 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 TAAPS(0.996)PS(0.004)LLYK;T(0.002)AAPS(0.991)PS(0.008)LLYK;TAAPS(0.999)PS(0.001)LLYK;TAAPS(0.999)PS(0.001)LLYK 167.71 1.4908e-05 1923876000.0 3568420.0 3942400.0 3159790.0 2616530.0 2763010.0 3498180.0 2708250.0 3452530.0 4105920.0 3898200.0 True False 3370472.62913109 3753001.1863369546 3363475.1192427566 2865204.2245115703 2980443.1676235916 3476346.561036014 2982026.339972894 3440553.9792565634 3360388.429820189 3863664.9807537124 0.8723511603414403 0.9713578182973903 0.8705400535495238 0.7415767771750839 0.7714031062398623 0.8997536221056771 0.7718128654599782 0.890489728378414 0.8697411516162703 1.0 21.88153857251456 -8.366464626363928 1.3740221771079502 0.9996864363852261 0.8454341654362305 0.3220632820109589 0.06595752105999345 1.8465344612977246 5.237325947997084 0.06837395005917297 0.020224122273467097 4.300662614481059e-09 8.366464626363928 -0.15425227094899563 TAAYGHFGRDS(ph)FPWEVPK ddPTM_KYSE-520_SHP099_60min_R1 1 TAAYGHFGRDSFPWEVPK 18 1 P31153 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 1 TAAYGHFGRDS(1)FPWEVPK 129.84 1.7395999999999997e-05 434750000.0 266800.0 264340.0 314100.0 254340.0 280960.0 296960.0 223020.0 239010.0 352590.0 238580.0 True False 252000.07214738562 251640.70961757097 334347.388577769 278512.3971298906 303069.95355627494 295106.56248828105 245565.03806544995 238180.93009535334 288568.5440705861 236466.36681243102 1.0656909713814657 1.0641712519614956 1.413932108336484 1.1778097700922143 1.2816619870371457 1.2479853539694479 1.0384776548803498 1.0072507701878903 1.2203365237961445 1.0 17.851275474561806 -6.762890907004218 24.99617756928456 1.06712045097001 1.2132422541533856 0.28055668121705624 0.11126495158128646 53.526411637522585 921724.3683157663 0.04608306046169457 0.03296794246368582 1.7262714698570235e-07 6.762890907004218 0.14612180318337553 TACTNFMMTPY(ph)VVTR ddPTM_KYSE-520_SHP099_60min_R1 2 TACTNFMMTPYVVTR 15 0 D7R525;J3KNK1;P45984-5;P45984-3;P45984-2;P45984-4;P45984 D7R525 MAPK9 Mitogen-activated protein kinase 9 1 TACT(0.001)NFMMT(0.066)PY(0.841)VVT(0.092)R;TACTNFMMT(0.012)PY(0.988)VVTR 167.14 3.6375999999999997e-06 220040000.0 477020.0 456470.0 343790.0 308050.0 369880.0 469460.0 370710.0 415330.0 493570.0 450160.0 True False 450558.74968420557 434540.49602456175 365951.2534834489 337326.97938139073 398987.4516706827 466529.92600265495 408184.9845809478 413889.31716875086 403950.12988717546 446171.93261918006 1.0098321224270506 0.9739305954851578 0.820202318274911 0.7560470632950113 0.8942459677561775 1.0456281354677928 0.9148602920510126 0.9276453468040463 0.905368761131727 1.0 18.767240235117182 -6.028735821910888 24.818266265744736 0.9534937475012266 0.8827788815485403 0.15803745179390594 0.07717267390759416 1352.291941873807 1167931.4826743277 0.027901872111862742 0.027954660879566707 9.359748475259546e-07 6.028735821910888 -0.07071486595268628 TADGRVS(ph)PAGDDKPK ddPTM_KYSE-520_SHP099_60min_R1 1 TADGRVSPAGDDKPK 15 2 H7C1Q0 H7C1Q0 BBX 1 T(0.001)ADGRVS(0.999)PAGDDKPK 73.11 0.013466999999999998 625390000.0 511980.0 395150.0 404030.0 420780.0 396350.0 390830.0 398720.0 463390.0 498100.0 381450.0 True False 483579.448793173 376166.40086775745 430074.42027085676 460770.80468788027 427540.4900769842 388390.68499897275 439026.50873220427 461782.60824603867 407657.59607918205 378070.64976360963 1.2790716473112451 0.9949632458985038 1.1375504037135988 1.2187425947398436 1.1308481373634949 1.0272965786733663 1.1612287518396562 1.2214188235314491 1.0782577180589707 1.0 18.528296329358252 -8.004211087286267 24.25414045019169 0.9999999890519818 1.14011459605754 0.24151800985745187 0.08150881614164504 138.68234247027203 798761.9769234587 0.07704178102474284 0.019892102304577337 9.903504715732982e-09 8.004211087286267 0.14011460700555822 TADGRVS(ph)PAGGTLDDKPK ddPTM_KYSE-520_SHP099_60min_R1 11 TADGRVSPAGGTLDDKPK 18 2 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 T(0.06)ADGRVS(0.94)PAGGTLDDKPK;T(0.032)ADGRVS(0.968)PAGGTLDDKPK;TADGRVS(1)PAGGTLDDKPK;TADGRVS(1)PAGGTLDDKPK;TADGRVS(1)PAGGTLDDKPK;TADGRVS(1)PAGGTLDDKPK;TADGRVS(1)PAGGTLDDKPK;TADGRVS(0.995)PAGGT(0.004)LDDKPK;TADGRVS(1)PAGGTLDDKPK;TADGRVS(1)PAGGTLDDKPK;T(0.021)ADGRVS(0.905)PAGGT(0.074)LDDKPK 186.35 1.3191e-12 35422660000.0 36584720.0 30817020.0 31306630.0 28520940.0 30484650.0 30109900.0 28823830.0 33638930.0 41167300.0 32278890.0 True False 34555292.65176874 29336524.10190995 33324705.46217907 31231561.562466744 32883618.521068145 29921972.945399705 31737624.029872026 33522244.403215304 33692356.06318112 31992924.147196446 1.0800917256823126 0.9169691387675397 1.0416273707540837 0.9762021570386394 1.0278403552539837 0.9352684614801545 0.9920201068164383 1.047801827959914 1.0531189930675215 1.0 24.931249524744562 -7.253588610584784 23.225082669204305 1.0378453074500344 0.9926140506608152 0.1148841641588283 0.04726584354922151 388.0904397486794 1148104.3051262703 0.021153349085053997 0.01189990594213797 5.5771379828273763e-08 7.253588610584784 -0.04523125678921924 TADSVS(ph)PLEPPTK ddPTM_KYSE-520_SHP099_60min_R1 3 TADSVSPLEPPTK 13 0 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 TADS(0.044)VS(0.956)PLEPPTK;TADS(0.03)VS(0.97)PLEPPTK;TADS(0.007)VS(0.993)PLEPPTK 155.86 2.8410000000000004e-06 1456020000.0 2649560.0 2842960.0 2175650.0 1812000.0 2272240.0 2821610.0 2462050.0 3160820.0 3142050.0 3217760.0 True False 2502583.6250330894 2706379.934230039 2315895.880163081 1984211.9352023366 2451052.3607229176 2803999.2853669166 2710938.041292444 3149855.8531609373 2571532.9246348017 3189253.1497794017 0.7846926874419459 0.8485936384251082 0.7261561787038667 0.6221556715683053 0.7685349031927601 0.8792024821111698 0.8500228467219535 0.987646858130033 0.806311949495973 1.0 21.604787186649755 -6.302755316329385 3.062241958472968 0.9054625126660343 0.7453227861289297 0.5186184741033598 0.07511938830819054 0.2344141289218946 4.42666915989195 0.028989084413455258 0.026188783747153672 4.980175915395648e-07 6.302755316329385 -0.16013972653710462 TADSVS(ph)PLEPPTKDK ddPTM_KYSE-520_SHP099_60min_R1 3 TADSVSPLEPPTKDK 15 1 Q9UMZ2-4;Q9UMZ2-8;Q9UMZ2-3;Q9UMZ2-7;Q9UMZ2-5;Q9UMZ2;Q9UMZ2-6;Q9UMZ2-9 Q9UMZ2-4 SYNRG Synergin gamma 1 TADS(0.008)VS(0.992)PLEPPTKDK;TADS(0.005)VS(0.995)PLEPPTKDK;TADS(0.163)VS(0.836)PLEPPTKDK 123.63 6.4523e-05 1163560000.0 1009460.0 1094290.0 1013490.0 784070.0 819310.0 875420.0 877180.0 904030.0 1393470.0 1040890.0 True False 953463.2414913796 1041718.6658372218 1078821.1870413357 858587.7770607583 883785.0357637798 869956.1790594397 965853.9148518126 900894.1309321874 1140450.9745200921 1031668.524400166 0.9241953388524122 1.0097416381321695 1.0457052449754491 0.8322322109807115 0.8566560041924621 0.8432516438022093 0.936205662970459 0.8732399114880299 1.1054432189672303 1.0 19.976548075917027 -9.847530615527285 9.760417301589257 0.9999999981669493 0.9316768150963942 0.04348112844890262 0.08724624889271473 0.0 0.0 0.08731809334160481 0.021177748345586993 1.4205920648961637e-10 9.847530615527285 -0.06832318307055507 TAENFR ddPTM_KYSE-520_SHP099_60min_R1 4 TAENFR 6 0 P49792;H0Y548;P30405-2;R4GN99;A6NM32;P62937;C9J5S7;F8WE65;F5H284;Q9Y536;A0A0H2UH34;P0DN26;A0A0B4J2A2;A0A075B767;A0A075B759;P0DN37;O43447;C9JQD4;P30405;Q08752 P49792;P62937;P30405;Q08752 RANBP2;PPIF;PPIH;PPIA;PPIAL4D;PPIAL4A;PPIAL4C;PPIAL4E;PPID E3 SUMO-protein ligase RanBP2;Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase F, mitochondrial;Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase H;Peptidyl-prolyl cis-trans isomerase D 0 ;;; 170.4 0.031872000000000004 14888500000.0 5391930.0 5812870.0 4310260.0 3638260.0 5917970.0 5907200.0 4596870.0 5199320.0 4915310.0 4924830.0 False True 5092828.894354031 5533610.999904252 4588106.256259844 3984039.136517247 6383680.570356739 5870330.97363542 5061566.480727855 5181284.772450406 4022813.608881681 4881199.837659764 1.0433559501214216 1.1336579496727344 0.9399546031410915 0.8162007844422428 1.3078097153705803 1.2026409835434813 1.036951292523718 1.0614776990844355 0.8241444199527741 1.0 22.218804386595416 -7.697457416365596 9.977286704119066 0.9124447622741434 1.068978675015605 0.17984633377140402 0.13297632196361325 0.6269592728269174 93.06718782793315 0.09550809374237115 0.035896810820522956 2.0069778694513848e-08 7.697457416365596 0.15653391274146156 TAESQT(ph)PTPSATSFFSGK ddPTM_KYSE-520_SHP099_60min_R1 6 TAESQTPTPSATSFFSGK 18 0 A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-5;P55265-3;P55265-2;P55265;P55265-4 A0A3B3ITG9 ADAR Double-stranded RNA-specific adenosine deaminase 1 TAES(0.001)QT(0.825)PT(0.128)PS(0.045)AT(0.002)SFFSGK;TAESQT(0.796)PT(0.203)PSAT(0.001)SFFSGK;TAESQT(0.962)PT(0.019)PS(0.019)ATSFFSGK;TAESQT(0.999)PT(0.001)PSATSFFSGK;TAES(0.003)QT(0.874)PT(0.1)PS(0.022)AT(0.001)SFFSGK;TAESQT(1)PTPSATSFFSGK 254.53 8.822800000000002e-24 5690260000.0 4373030.0 5983280.0 4014310.0 4288950.0 4176870.0 9018450.0 7606200.0 12529690.0 13094430.0 12056760.0 True False 4130449.308480815 5695834.247713622 4273078.845723092 4696570.518480163 4505565.905860616 8962162.508325819 8375108.925358379 12486227.429841643 10716811.595717978 11949946.486417329 0.3456458414416842 0.47664098363851914 0.3575814210197512 0.3930202134225812 0.3770364922539008 0.7499751165005203 0.7008490736655416 1.0448772673613114 0.8968083336522913 1.0 23.510500821835702 -6.643294920411523 1.2333011783315357 0.9800241005151893 0.3825661017922737 0.9067833676955337 0.08067349484515896 0.12221729657897606 0.37788468822485016 0.046774214998836786 0.029906338459533614 2.2735529835635323e-07 6.643294920411523 -0.5974579987229156 down TAESQTPT(ph)PSATSFFSGK ddPTM_KYSE-520_SHP099_60min_R1 2 TAESQTPTPSATSFFSGK 18 0 A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-5;P55265-3;P55265-2;P55265;P55265-4 A0A3B3ITG9 ADAR Double-stranded RNA-specific adenosine deaminase 1 TAESQT(0.241)PT(0.367)PS(0.367)AT(0.02)S(0.005)FFSGK;TAESQT(0.2)PT(0.791)PS(0.002)AT(0.006)SFFSGK 214.86 1.5207000000000002e-17 503290000.0 512220.0 656720.0 470710.0 460160.0 536240.0 861010.0 759620.0 1138700.0 1267310.0 1093500.0 True False 483806.1355147446 625170.185443184 501052.71976262826 503893.46804785135 578439.0372117631 855636.1172145575 836409.8027767787 1134750.1154745773 1037198.4502853007 1083812.440730126 0.44639286036320225 0.5768250685718546 0.4623057467628686 0.46492681677320125 0.5337076928385222 0.789468809417011 0.7717292876000934 1.0469986067978112 0.9569907221092395 1.0 20.047683681882443 -6.623105920400109 1.1692643744613325 1.0051068994880132 0.4837281383386629 0.9265727713326197 0.0610900936161139 0.1150175283688478 0.31975921404989316 0.037394408851285435 0.02420174239075296 2.3817385145615148e-07 6.623105920400109 -0.5213787611493503 down TAESQTPT(ph)PSATSFFSGKS(ph)PVTTLLECMHK ddPTM_KYSE-520_SHP099_60min_R1 1 TAESQTPTPSATSFFSGKSPVTTLLECMHK 30 1 A0A3B3ITG9;A0A3B3ISX1;A0A3B3IRQ9;P55265-5;P55265-3;P55265-2;P55265;P55265-4 A0A3B3ITG9 ADAR Double-stranded RNA-specific adenosine deaminase 2 TAES(0.006)QT(0.426)PT(0.568)PSATSFFS(0.001)GKS(0.998)PVTTLLECMHK 185.79 4.6366e-14 310650000.0 212820.0 247660.0 232830.0 239190.0 233060.0 262240.0 246270.0 292840.0 411510.0 278990.0 True False 201014.45035384785 235762.04185476122 247838.59434117135 261922.54568490424 251400.4960699936 260603.26288701096 271165.37496358325 291824.2063893699 336790.1573229155 276518.36565093586 0.726947918561038 0.8526089805997785 0.8962825805719953 0.9472157303849513 0.909163828876922 0.9424446809293839 0.9806414641763435 1.0553519861236105 1.2179666856127163 1.0 18.07701577823715 -4.84774882554615 0.345993070744826 1.0954620856290982 0.6092814667501701 0.6976260099931985 0.06737328256169968 2.6545859886512604 0.34562982404081494 0.07238737122091309 0.5229766771223454 1.4198784717673327e-05 4.84774882554615 -0.48618061887892805 TAFDDAIAELDTLNEDSYK ddPTM_KYSE-520_SHP099_60min_R1 4 TAFDDAIAELDTLNEDSYK 19 0 P61981 P61981 YWHAG 14-3-3 protein gamma;14-3-3 protein gamma, N-terminally processed 0 ;;; 378.17 4.646e-78 97848000.0 153995.0 188090.0 315579.0 118438.0 215751.0 204078.0 162435.0 144863.0 240426.0 204971.0 False True 145452.59036857844 179053.874071154 335921.7272842527 129694.31191031697 232729.3762447323 202804.27350310978 178855.5150128299 144360.50406427847 196770.69904624252 203155.11640502495 0.7159681377583101 0.8813653194644581 1.6535233432887533 0.6384004213398636 1.1455747724351963 0.9982730294558976 0.8803889273270895 0.7105925098951029 0.9685736816686714 1.0 17.632222173336142 -6.751729468520854 4.850622182090389 0.8641566984543735 1.0202134152061049 0.03795949404757348 0.2697298679666299 0.5823022062803072 35.856104833397694 0.11016802917908267 0.07917359689664197 1.7712119411896602e-07 6.751729468520854 0.15605671675173138 TAFDEAIAELDTLNEESYK ddPTM_KYSE-520_SHP099_60min_R1 2 TAFDEAIAELDTLNEESYK 19 0 P31946-2;P31946 P31946-2 YWHAB 14-3-3 protein beta/alpha;14-3-3 protein beta/alpha, N-terminally processed 0 ; 197.14 8.581399999999999e-13 12991000.0 46577.0 53172.0 66174.0 40839.0 61434.0 51677.0 50363.0 46277.0 61279.0 54781.0 False True 43993.280961052435 50617.53730720085 70439.68192214353 44720.32628130691 66268.50628835488 51354.464674390176 55454.183535513665 46116.47588813298 50152.27831788035 54295.682958973084 0.8102537543232423 0.9322571252202221 1.2973348539582636 0.823644235492875 1.2205115154077482 0.9458296106744738 1.021336881928826 0.8493580589635372 0.9236881384432797 1.0 15.728549873688205 -7.2365975899858626 23.622664529769125 0.9148923190002995 1.0143492963293712 0.05825513880239164 0.14956785216229973 971.8885852026656 924194.0796023299 0.06856553731495163 0.03955654304070623 5.7996583419344104e-08 7.2365975899858626 0.09945697732907166 TAFDEAIAELDTLS(ph)EESYK ddPTM_KYSE-520_SHP099_60min_R1 6 TAFDEAIAELDTLSEESYK 19 0 P63104;E7EX29;B0AZS6;B7Z2E6;H0YB80;P63104-2 P63104 YWHAZ 14-3-3 protein zeta/delta 1 TAFDEAIAELDTLS(1)EESYK;TAFDEAIAELDT(0.001)LS(0.998)EES(0.001)YK;TAFDEAIAELDT(0.001)LS(0.999)EESYK;TAFDEAIAELDT(0.001)LS(0.999)EESYK;TAFDEAIAELDTLS(0.996)EES(0.003)YK;TAFDEAIAELDTLS(1)EESYK 218.07 7.3664e-19 436893000.0 502929.0 462735.0 341023.0 365754.0 391749.0 461023.0 402134.0 499285.0 522121.0 474639.0 True False 475030.5258058946 440504.5160206044 363005.88823609194 400515.15019205015 422577.41755309387 458145.58444920107 442785.62916963396 497553.09686899534 427316.98799931473 470434.0677235541 1.0097706743573716 0.9363788599584639 0.7716403065634454 0.851373609335217 0.8982712914435808 0.973878415451888 0.9412278139469962 1.0576468223839977 0.9083461792363714 1.0 18.843633014960034 -6.2433167501655955 3.7480656114420094 0.9787751216399434 0.885456048416806 0.272362482155592 0.06724731016352739 0.3178140374709612 9.939340432325018 0.025050183304683355 0.02375266527361637 5.710619839974327e-07 6.2433167501655955 -0.09331907322313737 TAFDEAIAELDTLSEESYK ddPTM_KYSE-520_SHP099_60min_R1 1 TAFDEAIAELDTLSEESYK 19 0 P63104;E7EX29;B0AZS6;B7Z2E6;H0YB80;P63104-2 P63104 YWHAZ 14-3-3 protein zeta/delta 0 151.54 8.8254e-06 231470000.0 58373.0 74252.0 79548.0 56639.0 84710.0 75675.0 51646.0 65082.0 89840.0 72432.0 False True 55134.93332630943 70684.82246547572 84675.79136130023 62021.953530863706 91376.1950660309 75202.684254784 56866.88169638701 64856.24573225301 73527.32068209954 71790.30883124325 0.767999667697691 0.984601175510107 1.1794877712581897 0.8639321175878778 1.2728207546902741 1.0475325357850485 0.7921247675652631 0.9034122681476399 1.024195631403947 1.0 16.131501483420102 -6.6630222831506964 19.66122440629468 0.9214224164540207 1.0295551887136678 0.07887372073615206 0.14616091552516045 7.133554591593358 1406.8251513661394 0.0562451792721624 0.04356707096754624 2.172589702923395e-07 6.6630222831506964 0.10813277225964713 TAFQEALDAAGDKLVVVDFSATWCGPCK ddPTM_KYSE-520_SHP099_60min_R1 2 TAFQEALDAAGDKLVVVDFSATWCGPCK 28 1 P10599;P10599-2 P10599 TXN Thioredoxin 0 ; 138.02 2.6144999999999997e-06 279354400.0 79650.0 75386.0 75551.0 100644.0 87607.0 62269.0 60306.0 86078.0 86161.0 49712.0 False True 75231.65572166155 71764.3434033071 80421.13834587412 110209.17550027801 94501.17248435566 61880.356073487215 66402.31900984228 85779.4155087563 70516.33434205662 49271.59035535075 1.526876952399642 1.4565055214523575 1.6322009857175357 2.236769195096817 1.917964729833266 1.2559033639304316 1.3476796371081856 1.7409508175016903 1.4311763398235582 1.0 15.588468418294104 -6.26293280750245 24.974050983637163 1.400985057492598 1.7575793253643108 0.3509910343817022 0.26760094084820324 191.57073211324976 3203546.194435495 0.09982111707882975 0.09277150889438934 5.458423053386865e-07 6.26293280750245 0.3565942678717129 TAFYNEDDS(ph)EEEQR ddPTM_KYSE-520_SHP099_60min_R1 2 TAFYNEDDSEEEQR 14 0 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 TAFYNEDDS(1)EEEQR;TAFYNEDDS(1)EEEQR 311.43 3.0239e-47 1067830000.0 1529980.0 1374930.0 1290780.0 1229290.0 1228950.0 1266900.0 1306990.0 1452630.0 1544490.0 1308030.0 True False 1445108.9594604855 1308876.298987995 1373985.744121021 1346121.352000483 1325661.3732310089 1258992.807167307 1439113.3041931791 1447591.16557639 1264049.5494244848 1296441.8718319414 1.1146731611024485 1.0095911952754835 1.0598128415734567 1.0383198670514566 1.0225382271538166 0.9711139654786706 1.1100484606838834 1.1165877908053576 0.9750144429061949 1.0 20.306126091288775 -13.99987467416747 0.006864287426756098 0.3091079441762113 1.694420737494861 0.07995364782895853 0.05121629590062902 113757.8869676136 59.21335832928059 6626.451329910383 5383.618521101391 1.0002886150350568e-14 13.99987467416747 1.3853127933186498 TAGTSFMMTPY(ph)VVTR ddPTM_KYSE-520_SHP099_60min_R1 2 TAGTSFMMTPYVVTR 15 0 A0A1W2PPZ3;A0A286YFD7;A0A286YEQ7;A0A286YEX7;A0A286YFC0;A0A1P0B7D2;A0A286YFJ6;A0A286YFJ4;A0A286YES9;D6RJF9;A0A286YEN5;A0A286YF85;A0A286YF97;A0A286YFA6;A0A286YF62;F8W9R5;A0A1W2PRF2;A0A286YFI3;A0A286YEW9;A0A286YES0;A0A286YFE2;A0A286YEV8;D6RCB1;A0A286YF83;A0A286YF02;A0A286YEY0;A0A286YEV3;A0A286YFN2;A0A286YFB6;A0A286YFM6;A0A286YF35;A0A286YF19;A0A286YEQ0;P53779-3;P45983-3;P53779-2;P45983;P45983-4;P45983-5;P53779;P45983-2 A0A1W2PPZ3 MAPK10;MAPK8 Mitogen-activated protein kinase 10;Mitogen-activated protein kinase 8 1 TAGTSFMMT(0.012)PY(0.988)VVTR;TAGTSFMMT(0.014)PY(0.986)VVTR 263.29 4.6151000000000004e-27 489570000.0 799120.0 848780.0 589890.0 530960.0 600970.0 856500.0 628760.0 820930.0 935490.0 843000.0 True False 754791.2205937743 808003.3347552458 627915.2532573718 581422.2787610546 648262.9199484432 851154.265797456 692321.1969062521 818082.3854365014 765628.5977838062 835531.6758440748 0.9033663742685345 0.9670529054915612 0.7515157969601048 0.6958710191013254 0.7758687536215212 1.0186977829866222 0.8285995814663185 0.9791159438809477 0.9163370102160988 1.0 19.67233499777643 -6.250148239226327 24.77614557878716 0.9397479070486704 0.8164146795733481 0.35755209179990166 0.0865761823676939 867.1828891561737 1902860.5102020702 0.031148588351986577 0.030875728260084848 5.621494120505004e-07 6.250148239226327 -0.12333322747532227 TAHLDEEVNKGDILVVATGQPEMVK ddPTM_KYSE-520_SHP099_60min_R1 1 TAHLDEEVNKGDILVVATGQPEMVK 25 1 V9GZ78;V9GYY3;A0A384N5Y3;F5H2F4;P11586 V9GZ78 MTHFD1 C-1-tetrahydrofolate synthase, cytoplasmic;Methylenetetrahydrofolate dehydrogenase;Methenyltetrahydrofolate cyclohydrolase;Formyltetrahydrofolate synthetase;C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed 0 103.84 0.0016710999999999998 297580000.0 244120.0 191800.0 100790.0 279320.0 215730.0 167060.0 196650.0 236770.0 148810.0 130200.0 False True 230578.1769588448 182585.64010233048 107287.08466970187 305866.48881937977 232706.7236642055 166017.31657223933 216529.3011190511 235948.70013253327 121789.85519482665 129046.52929406718 1.7867832495782237 1.4148822219484884 0.8313829535486339 2.3702031390738205 1.8032776622292623 1.2864919148187572 1.6779165027029197 1.8284002012550122 0.943766995215313 1.0 16.977531815112624 -7.771920021628089 24.983460985762246 0.9718828941945914 1.6127389292036478 0.3197940766991494 0.3806296400638958 291.01141443991804 693681.0058538311 0.3600710196429218 0.09697290017213599 1.690752266852017e-08 7.771920021628089 0.6408560350090564 TAITT(ph)PNFK ddPTM_KYSE-520_SHP099_60min_R1 2 TAITTPNFK 9 0 H0YMD2;Q9BXS6-7;Q9BXS6-4;Q9BXS6-6;Q9BXS6-3;Q9BXS6-5;Q9BXS6-2;Q9BXS6 H0YMD2 NUSAP1 Nucleolar and spindle-associated protein 1 1 TAIT(0.025)T(0.975)PNFK;TAIT(0.099)T(0.901)PNFK 152.67 0.0011300000000000001 1449400000.0 3544200.0 4023400.0 2965000.0 2619400.0 2505300.0 3373500.0 2676800.0 3453600.0 3859900.0 4137100.0 True False 3347596.160812461 3830109.824753476 3156128.6441677376 2868346.9884486697 2702452.856792909 3352444.7351637115 2947397.0670504714 3441620.267676297 3159039.4601606834 4100448.5126150926 0.8163975600506944 0.9340709468659549 0.7697032737901377 0.699520303601949 0.659062746057845 0.81758000980865 0.7187987016500169 0.8393277606310869 0.7704131512545153 1.0 21.96735029162459 -10.255505970115161 7.541287339558923 1.0000005350579173 0.7797849148099462 0.4405245304121982 0.07419132203129629 7.195896344418879e-07 7.100809920362074e-08 0.0774487172501558 0.018784027423753763 5.552569841169302e-11 10.255505970115161 -0.22021562024797114 TALIHDGLAR ddPTM_KYSE-520_SHP099_60min_R1 2 TALIHDGLAR 10 0 P25398 P25398 RPS12 40S ribosomal protein S12 0 ; 160.77 0.00012793 1180110000.0 1239690.0 1075330.0 790510.0 804280.0 1144120.0 1092140.0 766130.0 916950.0 943290.0 848760.0 False True 1170921.9244392521 1023669.5326967622 841467.5394607212 880718.5293844013 1234155.7348476837 1085323.5491512374 843577.8971082567 913769.3144677379 772012.3144058055 841240.646725287 1.3918988924243278 1.2168569560703226 1.0002697120453197 1.0469281683104479 1.467066218984906 1.2901463491761798 1.0027783374377688 1.086216313993843 0.9177068623717033 1.0 19.682159033746025 -6.771005243685728 24.921133697126102 1.0088600014800482 1.2259372700483535 0.4106560303937574 0.1368467014117563 236.5026137690831 616133.6957900412 0.06196867156333654 0.042386936726378416 1.694317343081009e-07 6.771005243685728 0.21707726856830534 TALLDAAGVASLLTTAEVVVTEIPKEEK ddPTM_KYSE-520_SHP099_60min_R1 2 TALLDAAGVASLLTTAEVVVTEIPKEEK 28 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ; 91.11399999999999 0.0053183 62944000.0 56055.0 62019.0 28400.0 80099.0 54212.3 58438.0 38345.8 65942.0 63480.0 35698.9 False True 52945.517407127845 59039.51414758315 30230.709441606632 87711.58487735753 58478.49958420716 58073.266765524546 42222.16768294383 65713.26259297844 51953.632200575164 35382.63551932394 1.4963700874744639 1.6686013712952272 0.8543939420537617 2.478944363244353 1.6527457247290014 1.64129285207735 1.193301942131601 1.857217859226164 1.4683369804999715 1.0 15.110753892502853 -8.023970944829047 22.381110857486366 0.9999999737034754 1.6044825027490204 0.17284770872936006 0.3974600448408942 936.0718941932455 873990.1905851125 0.37427188005295564 0.096636583911585 9.463004686453524e-09 8.023970944829047 0.604482529045545 TALPTSGS(ph)SAGELELLAGEVPAR ddPTM_KYSE-520_SHP099_60min_R1 1 TALPTSGSSAGELELLAGEVPAR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPT(0.087)S(0.11)GS(0.757)S(0.045)AGELELLAGEVPAR 90.729 7.6726e-05 0.0 24078.0 19433.0 16275.0 15626.0 17709.0 20225.0 14362.0 21485.0 26576.0 20227.0 True False 22742.345341696975 18499.409510472313 17324.1125409207 17111.090341871783 19102.59754957317 20098.76827291718 15813.851119612553 21410.473549636703 21750.468326441187 20047.804516367876 1.1344057810983323 0.9227648591330094 0.8641401369799153 0.8535144248788721 0.9528523452020394 1.0025421116066697 0.7888071288155996 1.0679709856586184 1.0849301881751283 1.0 14.291156631851708 -7.369347525867301 24.04065479085593 1.0573434094259817 0.9288938809411832 0.2674611214241367 0.09051683981886612 28.321439424356054 6292.163475019267 0.049412962395723264 0.023737215307482715 4.272208838149927e-08 7.369347525867301 -0.12844952848479851 TALPTSGSS(ph)AGELELLAGEVPAR ddPTM_KYSE-520_SHP099_60min_R1 1 TALPTSGSSAGELELLAGEVPAR 23 0 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPTSGS(0.185)S(0.814)AGELELLAGEVPAR 126.09 1.1022e-07 0.0 36972.0 42523.0 38546.0 24665.0 27716.0 37812.0 34929.0 34698.0 52055.0 42752.0 True False 34921.08945814522 40480.131251675746 41030.736835780604 27009.154184197352 29897.091517531735 37576.00128235076 38459.96419418933 34577.640736574096 42603.12419976277 42373.25054055269 0.8241305307631406 0.9553227740443192 0.968316952614073 0.6374104851443635 0.705565212395475 0.8867859039133474 0.907647246872925 0.8160252115537391 1.005424971090903 1.0 15.370866184646315 -7.76573896665416 24.8786026873704 1.0027126084436306 0.8388220460123335 0.31122073450273025 0.09821051395056808 144.52017254115214 836177.2653771258 0.09206858115005247 0.027044010015279736 1.7149877937600772e-08 7.76573896665416 -0.16389056243129718 TALPTSGSSAGELELLAGEVPARS(ph)PGAFDMSGVR ddPTM_KYSE-520_SHP099_60min_R1 2 TALPTSGSSAGELELLAGEVPARSPGAFDMSGVR 34 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 TALPTSGSSAGELELLAGEVPARS(1)PGAFDMSGVR;TALPTSGSSAGELELLAGEVPARS(1)PGAFDMSGVR 253.47 5.5544e-32 546440000.0 131326.0 181462.0 142500.0 95993.0 107063.0 157723.0 111434.0 134323.0 274910.0 159175.0 True False 124041.08498810927 172744.29313998506 151685.77800806134 105116.14585865223 115488.24899485869 156738.59225262387 122698.83621103656 133857.06486422374 224993.2739171414 157764.83333627603 0.7862403956889142 1.094948027940931 0.9614676148057839 0.6662837568788031 0.7320278325188939 0.9934951214288376 0.7777324871221698 0.8484594572410643 1.4261307108762815 1.0 17.267416130830824 -7.738911313320086 24.992423416377523 1.2130653145643198 0.8602638762123396 0.45679736915690816 0.15503747988701486 178.19168952943141 197685.33430582882 0.10469659107102913 0.03950877454391116 1.8242681955888878e-08 7.738911313320086 -0.3528014383519802 TALSSTESCTMKGEEKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 TALSSTESCTMKGEEKSPK 19 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 TALSSTES(0.005)CT(0.005)MKGEEKS(0.99)PK;TALSSTESCTMKGEEKS(1)PK;TALSSTESCTMKGEEKS(1)PK 178.53 2.0721e-09 1835090000.0 887270.0 928530.0 937270.0 709550.0 786050.0 727980.0 538720.0 573730.0 1162730.0 670100.0 True False 838051.3643711064 883922.025048055 997687.9238850218 776985.4186660134 847907.662987294 723436.4067895301 593179.0750005341 571739.8645395881 951607.5420380394 664163.4353299106 1.2618149687129647 1.3308802894410823 1.5021723130383402 1.1698708139210654 1.2766551392069814 1.0892445568464286 0.8931221495291797 0.8608421272929413 1.4327912248968455 1.0 19.3411787737299 -6.098210446182783 1.747951426413382 1.0317500085636186 1.3386479023416793 0.3729752094519726 0.16446242075969958 0.3728679550210017 2.274557665304511 0.06541115803597514 0.06718675662723705 7.976080964609374e-07 6.098210446182783 0.30689789377806065 TAMPS(ph)PGVSQNK ddPTM_KYSE-520_SHP099_60min_R1 6 TAMPSPGVSQNK 12 0 Q86UU0-3;Q86UU0-4;Q86UU0-2;Q86UU0;A0A087WZX0 Q86UU0-3 BCL9L B-cell CLL/lymphoma 9-like protein 1 TAMPS(1)PGVSQNK;TAMPS(1)PGVSQNK;TAMPS(1)PGVSQNK;TAMPS(1)PGVSQNK;TAMPS(1)PGVSQNK;TAMPS(0.987)PGVS(0.013)QNK 231.22 3.648000000000001e-12 2563570000.0 4791260.0 4989370.0 3497140.0 3225970.0 3782530.0 5659470.0 4452640.0 6407880.0 6776170.0 6652320.0 True False 4525479.256659982 4749673.1760029495 3722571.2400218393 3532565.2188767553 4080193.591348296 5624147.148456193 4902756.304778691 6385652.55989044 5545788.341344851 6593385.620226641 0.6863665372122468 0.7203693898067021 0.5645917673314972 0.5357740957907642 0.6188313298150523 0.8529983641792315 0.7435870715248964 0.968493718962996 0.8411139072970254 1.0 22.652588030498816 -6.6653628567895655 1.2276605188010334 0.9264077639516778 0.6222193545199282 0.7140467278844147 0.08136036587716215 0.26673847123221733 0.8156293636133917 0.05239172149431687 0.0328015832656754 2.1609123083856848e-07 6.6653628567895655 -0.30418840943174963 TAMRVS(ph)PHHPAPTPNPR ddPTM_KYSE-520_SHP099_60min_R1 3 TAMRVSPHHPAPTPNPR 17 1 A8MZI9;Q01196-7;Q01196-3;Q01196-4;Q01196;Q01196-9;Q01196-10;Q01196-2;Q01196-8;Q01196-11 A8MZI9 RUNX1 Runt-related transcription factor 1 1 T(0.204)AMRVS(0.796)PHHPAPTPNPR;T(0.047)AMRVS(0.953)PHHPAPTPNPR;T(0.207)AMRVS(0.793)PHHPAPTPNPR 124.08 5.012e-05 16083000000.0 4648530.0 4408690.0 4040290.0 3843620.0 4002440.0 3944750.0 3433440.0 3484150.0 4881470.0 3524090.0 True False 4390666.774285186 4196889.914821393 4300733.55809257 4208916.489173512 4317409.25723156 3920129.352019284 3780525.622345252 3472064.2968567247 3995118.099844706 3492869.3043005345 1.2570372355127213 1.2015593912013958 1.2312895741038368 1.2050025702339784 1.2360637862733153 1.1223235141356973 1.0823553053332244 0.9940435768901533 1.1437926105410776 1.0 21.73598123050382 -6.506986845388583 2.1082344999887486 1.0515020561952213 1.2251908951096202 0.7888797873862925 0.041932999782779874 0.13774316110062845 1.2265425168240387 0.017178264131867144 0.013363281860695716 3.111810591214454e-07 6.506986845388583 0.1736888389143989 TANS(ph)PGSGARPDPVR ddPTM_KYSE-520_SHP099_60min_R1 7 TANSPGSGARPDPVR 15 1 Q13206;E9PIF2;A0A3B3ISR7 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 T(0.238)ANS(0.653)PGS(0.108)GARPDPVR;T(0.006)ANS(0.497)PGS(0.497)GARPDPVR;TANS(0.881)PGS(0.119)GARPDPVR;T(0.209)ANS(0.789)PGS(0.002)GARPDPVR;T(0.075)ANS(0.614)PGS(0.312)GARPDPVR;T(0.056)ANS(0.942)PGS(0.002)GARPDPVR;T(0.011)ANS(0.979)PGS(0.009)GARPDPVR 177.62 2.1282e-08 14934890000.0 6128160.0 5490780.0 5003970.0 4286320.0 4712080.0 5328770.0 4647270.0 5603930.0 6521260.0 5543860.0 True False 5788218.748615911 5226994.686971192 5326533.912835078 4693690.564070899 5082893.887932278 5295511.169823132 5117061.404584443 5584491.274797091 5337163.571586686 5494745.713457818 1.05340975733223 0.9512714435845783 0.9693867906915596 0.8542143365388207 0.9250462447212388 0.9637408983009501 0.9312644608924586 1.0163329780884067 0.9713213040077215 1.0 22.38962128681861 -7.257318024837767 24.856720598778562 0.9953703557927959 0.9464869809175701 0.163167947171316 0.04745773327862605 589.6166573536688 3556127.220561886 0.02415948071661564 0.013300852566637527 5.529450507384758e-08 7.257318024837767 -0.04888337487522576 TANSPGS(ph)GARPDPVR ddPTM_KYSE-520_SHP099_60min_R1 2 TANSPGSGARPDPVR 15 1 Q13206;E9PIF2;A0A3B3ISR7 Q13206 DDX10 Probable ATP-dependent RNA helicase DDX10 1 TANS(0.112)PGS(0.888)GARPDPVR;TANS(0.445)PGS(0.555)GARPDPVR 161.61 8.238e-08 2508310000.0 783480.0 740840.0 637990.0 555780.0 614290.0 632330.0 623670.0 716880.0 790350.0 665420.0 True False 740018.8025713413 705248.9343764895 679115.8562200925 608601.1640986498 662631.128168011 628383.393919096 686716.6500326385 714393.3106010498 646842.3631021514 659524.8964889259 1.12204832070925 1.0693287518499786 1.029704655329104 0.9227872478182767 1.004709802003869 0.9527819150791484 1.041229305653921 1.0831938481840848 0.9807701976767037 1.0 19.331067595419565 -4.63824996124516 2.377065227691829 1.0006485823839564 1.1168560808894938 0.47145608101175784 0.04209293587585522 0.304006157293502 3.1825115573914062 0.012222455205009461 0.05225293514012879 2.3001175874968884e-05 4.63824996124516 0.11620749850553747 TAPAAPAEDAVAAAAAAPSEPSEPS(ph)RPSPQPKPR ddPTM_KYSE-520_SHP099_60min_R1 2 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPS(0.001)EPS(0.168)EPS(0.5)RPS(0.332)PQPKPR;TAPAAPAEDAVAAAAAAPS(0.003)EPS(0.152)EPS(0.569)RPS(0.276)PQPKPR 204.25 3.3422e-16 5368000000.0 221751.0 287184.0 223664.0 221679.0 212323.0 259083.0 181154.0 242600.0 293298.0 228797.0 True False 209450.029980341 273387.2495680275 238081.73931505287 242747.30550977835 229031.61214738406 257465.96689504106 199466.8142126647 241758.47722326592 240042.47664089967 226770.03658137252 0.9236230374076932 1.2055704258350164 1.0498818225908841 1.0704558202188792 1.0099729911416229 1.1353614912111805 0.8795995150844784 1.0660953310580565 1.0585281912002715 1.0 17.790870502145406 TAPAAPAEDAVAAAAAAPSEPSEPSRPS(ph)PQPK ddPTM_KYSE-520_SHP099_60min_R1 4 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPK 32 1 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPSEPS(0.017)EPS(0.05)RPS(0.933)PQPK;TAPAAPAEDAVAAAAAAPS(0.001)EPS(0.032)EPS(0.176)RPS(0.791)PQPK;TAPAAPAEDAVAAAAAAPSEPS(0.003)EPS(0.097)RPS(0.9)PQPK;TAPAAPAEDAVAAAAAAPSEPSEPS(0.005)RPS(0.994)PQPK 249.85 1.2562e-31 8814490000.0 1390230.0 1829250.0 1185040.0 1253690.0 1437540.0 1706680.0 1392560.0 1809730.0 1832380.0 1777320.0 True False 1313111.1705452045 1741370.084239773 1261429.5745310409 1372840.3206643579 1550666.2195162561 1696027.9770591976 1533333.5548758975 1803452.4690241585 1499665.9825407986 1761574.327534035 0.7454191117688357 0.9885305757591589 0.7160808118138682 0.779325799204935 0.8802729440812063 0.9627910389869309 0.8704336404711099 1.0237731334043378 0.8513214339585247 1.0 20.748433918243034 -5.9911947141874835 4.445824995986211 0.9378065514920361 0.8143118136247552 0.36214531788598026 0.08365065325704503 0.23741986863948278 11.75870484607398 0.026371325662378802 0.02874514823069513 1.0204818521850213e-06 5.9911947141874835 -0.12349473786728082 TAPAAPAEDAVAAAAAAPSEPSEPSRPS(ph)PQPKPR ddPTM_KYSE-520_SHP099_60min_R1 9 TAPAAPAEDAVAAAAAAPSEPSEPSRPSPQPKPR 34 2 Q53GA4 Q53GA4 PHLDA2 Pleckstrin homology-like domain family A member 2 1 TAPAAPAEDAVAAAAAAPS(0.029)EPS(0.029)EPS(0.194)RPS(0.748)PQPKPR;TAPAAPAEDAVAAAAAAPSEPS(0.008)EPS(0.18)RPS(0.812)PQPKPR;TAPAAPAEDAVAAAAAAPSEPS(0.039)EPS(0.173)RPS(0.788)PQPKPR;TAPAAPAEDAVAAAAAAPS(0.004)EPS(0.238)EPS(0.172)RPS(0.587)PQPKPR;TAPAAPAEDAVAAAAAAPS(0.056)EPS(0.056)EPS(0.195)RPS(0.693)PQPKPR;TAPAAPAEDAVAAAAAAPSEPS(0.004)EPS(0.228)RPS(0.768)PQPKPR;TAPAAPAEDAVAAAAAAPSEPS(0.001)EPS(0.211)RPS(0.788)PQPKPR;TAPAAPAEDAVAAAAAAPS(0.004)EPS(0.096)EPS(0.035)RPS(0.866)PQPKPR;TAPAAPAEDAVAAAAAAPS(0.008)EPS(0.037)EPS(0.168)RPS(0.787)PQPKPR 314.57 2.0790999999999997e-67 82790590000.0 12060879.0 15225350.0 9567825.0 9078949.0 9320576.0 11678570.0 8692356.0 12719420.0 15361670.0 12254159.0 True False 11391837.99910379 14493901.332283724 10184582.308561277 9941809.583274456 10054052.304376883 11605679.712684404 9571064.173699407 12675299.300754957 12572377.964187305 12145596.684851442 0.9379397566619535 1.193346173791626 0.8385411250534909 0.8185525866896558 0.8277940199444273 0.9555462785257436 0.7880274985284904 1.0436127289295045 1.035138765958544 1.0 23.533930032170527 -9.557076421431683 8.57429584891962 0.9999999998932979 0.93473285922686 0.023104033398890778 0.12040331593113734 0.0 0.0 0.12234250902646975 0.029672416895248053 2.772832135185192e-10 9.557076421431683 -0.0652671406664379 TAPCISES(ph)PRK ddPTM_KYSE-520_SHP099_60min_R1 3 TAPCISESPRK 11 1 H0YIT6;G3V1N3;Q86XJ1 H0YIT6 GAS2L3 GAS2-like protein 3 1 TAPCISES(1)PRK;TAPCISES(1)PRK;TAPCISES(1)PRK 193.11 1.2098e-05 801430000.0 841790.0 772670.0 670970.0 602120.0 640370.0 651850.0 646240.0 570870.0 736240.0 757080.0 True False 795094.2306332386 735549.773398685 714221.7997899586 659345.3037660209 690763.4757931083 647781.5623585194 711568.2458946113 568889.785212059 602557.3751000548 750372.8601993268 1.05959886451921 0.9802457050529464 0.9518225373985874 0.8786902335338653 0.9205603139879234 0.8632795730197981 0.9482862236056785 0.7581428052461024 0.8030106192006908 1.0 19.517248123233717 -3.885397430296447 0.5654158981416902 0.861484142375722 1.2821045228949324 0.4362359222473706 0.06545959173526035 5.074042330165507 0.9106641970429317 0.03402984947069914 1.5332562908927883 0.00013019747737754304 3.885397430296447 0.42062038051921036 TAPPALPTGYDS(ph)EEEEESRPMSYDEK ddPTM_KYSE-520_SHP099_60min_R1 12 TAPPALPTGYDSEEEEESRPMSYDEK 26 1 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2;A0A0G2JHN8;A0A140T9I1 H0Y6K2 BRD2 Bromodomain-containing protein 2 1 TAPPALPT(0.133)GY(0.108)DS(0.759)EEEEESRPMSYDEK;TAPPALPT(0.009)GY(0.028)DS(0.963)EEEEESRPMSYDEK;TAPPALPT(0.052)GY(0.044)DS(0.904)EEEEESRPMSYDEK;TAPPALPTGYDS(1)EEEEESRPMSYDEK;TAPPALPT(0.009)GYDS(0.991)EEEEESRPMSYDEK;TAPPALPTGYDS(1)EEEEESRPMSYDEK;TAPPALPTGYDS(1)EEEEESRPMSYDEK;TAPPALPTGYDS(1)EEEEESRPMSYDEK;TAPPALPTGYDS(1)EEEEESRPMSYDEK;TAPPALPTGYDS(1)EEEEESRPMSYDEK;TAPPALPTGYDS(1)EEEEESRPMSYDEK;TAPPALPT(0.001)GY(0.001)DS(0.998)EEEEESRPMSYDEK 292.97 3.065199999999999e-49 8323090000.0 4767543.0 4093516.0 3652030.0 4004569.0 4225889.0 4062529.0 4068696.0 4305728.0 4654570.0 4078877.0 True False 4503077.885928648 3896857.346867218 3887445.6972545986 4385162.033742432 4558442.422280663 4037173.2495923787 4479999.498326352 4290792.434532466 3809417.4201611765 4042741.3230982916 1.113867429558308 0.9639145904790983 0.9615865539166684 1.0847001287684948 1.1275622301718642 0.9986226985451432 1.108158830922418 1.0613571563475825 0.9422857204333075 1.0 21.94690246429602 -3.717846941074938 6.437548265767632 1.0341422252944767 6.339795351587631 0.14057534341148314 0.06210362630416447 8603.771535325726 3071.972297993785 0.016070927063962924 656050.1901808522 0.0001914930687428989 3.717846941074938 5.305653126293154 TAPPALPTGYDS(ph)EEEEESRPMSYDEKR ddPTM_KYSE-520_SHP099_60min_R1 6 TAPPALPTGYDSEEEEESRPMSYDEKR 27 2 H0Y6K2;A0A140T9E9;A0A0G2JK44;P25440-4;P25440-3;P25440;P25440-2;A0A0G2JHN8;A0A140T9I1 H0Y6K2 BRD2 Bromodomain-containing protein 2 1 TAPPALPT(0.044)GY(0.04)DS(0.905)EEEEES(0.004)RPMS(0.004)Y(0.003)DEKR;TAPPALPTGYDS(1)EEEEESRPMSYDEKR;TAPPALPTGYDS(1)EEEEESRPMSYDEKR;TAPPALPTGYDS(1)EEEEESRPMSYDEKR;TAPPALPTGYDS(1)EEEEESRPMSYDEKR;TAPPALPTGYDS(1)EEEEESRPMSYDEKR 302.29 8.109999999999999e-53 8272550000.0 3994240.0 4225810.0 3849160.0 3082590.0 3235450.0 3374960.0 2928060.0 3006460.0 4561190.0 2975780.0 True False 3772671.544879968 4022795.7445298717 4097283.012473758 3375558.4267855207 3490061.5078076976 3353895.6227621557 3224056.87991176 2996031.2919730376 3732992.8742429367 2949416.9043218037 1.2791245413125023 1.363929168045127 1.389184081256867 1.1444833118842197 1.183305589214493 1.1371385367215012 1.093116702215792 1.0158046112717838 1.2656714853613786 1.0 21.491998333157042 -5.3189809947233195 5.583125596530735 1.1213277584284091 1.345927701078609 0.6430928843511756 0.07656653351464934 0.1272589279591389 8.57817555876616 0.021225414751853904 0.03216802833074103 4.7975444283947775e-06 5.3189809947233195 0.2245999426501999 TAPPAS(ph)PEAR ddPTM_KYSE-520_SHP099_60min_R1 2 TAPPASPEAR 10 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TAPPAS(1)PEAR;T(0.001)APPAS(0.999)PEAR 97.163 0.0028768 2129800000.0 4593600.0 4828500.0 4532290.0 4354760.0 4090630.0 4629520.0 3948280.0 4255290.0 5756600.0 4947600.0 True False 4338783.850885421 4596531.612273745 4824448.665320394 4768635.081093667 4412539.308499093 4600625.448446745 4347410.673899451 4240529.392182148 4711346.552076737 4903768.113174552 0.8847856894433417 0.9373468537234908 0.9838247963558764 0.9724430215780729 0.8998262574130056 0.9381816885033004 0.8865449127212234 0.8647491672351849 0.960760468958381 1.0 22.22545932855621 -5.771474918628228 24.993374110867983 0.91698316477767 0.9468837693128394 0.026086731111210404 0.04378573274935141 520.5923513878298 1296524.1291125112 0.013560257224037123 0.015553733411703616 1.6924859860524064e-06 5.771474918628228 0.029900604535169406 TAPS(ph)PLVEAK ddPTM_KYSE-520_SHP099_60min_R1 3 TAPSPLVEAK 10 0 Q8TEH3;Q8TEH3-7;Q8TEH3-6;A0A0A0MS48;Q8TEH3-4;Q8TEH3-3;Q8TEH3-5;Q8TEH3-2 Q8TEH3 DENND1A DENN domain-containing protein 1A 1 TAPS(1)PLVEAK;TAPS(1)PLVEAK;TAPS(1)PLVEAK 203.51 7.859100000000001e-07 2263400000.0 2859850.0 3059420.0 2199570.0 1790490.0 2036430.0 2664490.0 1809770.0 2315240.0 2760510.0 2536010.0 True False 2701208.419530362 2912440.870916956 2341357.8016364356 1960657.6312695525 2196685.4552982817 2647859.929567621 1992719.2132531144 2307208.9728210783 2259270.970794104 2513542.9243859234 1.0746617427232863 1.1586994766076997 0.9314970430466971 0.7800374571874699 0.8739399013187522 1.0534373230226464 0.7927929910884454 0.9179111088324644 0.8988392236611834 1.0 21.261290895823112 -4.83205372869284 5.686030075732504 0.8968764695781696 1.1160110841151574 0.5234518228315705 0.08039783629994533 0.13507652239520715 7.742008685634664 0.02086357447726053 0.045414158705169023 1.4721303667242412e-05 4.83205372869284 0.2191346145369878 TAPTALGITLSSS(ph)PTSTPELR ddPTM_KYSE-520_SHP099_60min_R1 4 TAPTALGITLSSSPTSTPELR 21 0 F5H1U9;O75970-5;O75970-3;O75970-2;O75970 F5H1U9 MPDZ Multiple PDZ domain protein 1 TAPTALGITLS(0.019)S(0.199)S(0.78)PT(0.002)STPELR;TAPTALGITLSS(0.019)S(0.981)PTSTPELR;TAPTALGITLSS(0.001)S(0.999)PT(0.001)STPELR;TAPTALGITLS(0.007)S(0.058)S(0.802)PT(0.058)S(0.058)T(0.016)PELR 450.54 4.871599999999999e-125 1009590000.0 817719.0 1044090.0 702058.0 691377.0 664609.0 1007405.0 644173.0 899350.0 1057230.0 1015956.0 True False 772358.4969875874 993930.3491889602 747313.7820125167 757085.2622099253 716909.9471920653 1001117.4117170888 709292.2933626365 896230.3647598682 865263.6825994652 1006955.4202418084 0.7670235260287042 0.987064898017312 0.7421518043301839 0.7518557892345624 0.7119579802449525 0.9942023167983766 0.7043929444188387 0.8900397641681587 0.8592869805414846 1.0 19.941568383334495 -8.297484868010955 0.9475107377054015 0.9999652480305921 0.813086384212143 0.23901341301060508 0.0999699179470328 1.5456740189740075 2.6081865344630693 0.09474456171608885 0.031381266295630074 5.040981829346112e-09 8.297484868010955 -0.1868788638184491 TAPTLS(ph)PEHWK ddPTM_KYSE-520_SHP099_60min_R1 11 TAPTLSPEHWK 11 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 TAPT(0.092)LS(0.908)PEHWK;TAPT(0.001)LS(0.999)PEHWK;TAPT(0.001)LS(0.999)PEHWK;TAPTLS(1)PEHWK;TAPTLS(1)PEHWK;TAPT(0.001)LS(0.999)PEHWK;TAPTLS(1)PEHWK;TAPT(0.003)LS(0.997)PEHWK;TAPT(0.347)LS(0.653)PEHWK;TAPTLS(1)PEHWK;TAPT(0.009)LS(0.991)PEHWK 242.4 1.8067e-14 43295040000.0 13692073.0 13230585.0 11631448.0 11718145.0 11996440.0 12212424.0 11900618.0 12600990.0 14608800.0 12320038.0 True False 12932546.416219175 12594967.837087046 12381229.749054806 12831833.977611229 12940491.577593401 12136201.73184732 13103648.606279165 12557280.106783178 11956210.17787905 12210892.048164524 1.0590992341270535 1.0314535406101026 1.0139496525084657 1.0508514797278912 1.0597498959577278 0.9938833038550667 1.0731114937871256 1.0283671379005206 0.979143057748696 1.0 23.54166526228082 -7.6592780208020885 5.326007058031604 0.9901652210735113 1.0390740319178302 0.4373211976312993 0.02258798843145948 0.1842643612171781 7.800878759158074 0.015825764753978264 0.005597732877372704 2.1914016241948038e-08 7.6592780208020885 0.04890881084431886 TAQALSSGSGS(ph)QETK ddPTM_KYSE-520_SHP099_60min_R1 5 TAQALSSGSGSQETK 15 0 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 TAQALSSGS(0.001)GS(0.999)QETK;TAQALSS(0.001)GS(0.004)GS(0.988)QET(0.007)K;TAQALSSGS(0.005)GS(0.995)QETK;TAQALSSGS(0.002)GS(0.998)QETK;TAQALSSGSGS(1)QETK 337.71 5.713499999999999e-47 5372500000.0 8483700.0 8149500.0 6694110.0 6381500.0 6503140.0 8176100.0 7246930.0 8098010.0 9010100.0 8376700.0 True False 8013092.249163328 7757985.787351112 7125623.041554689 6987995.8413320705 7014900.1201948915 8125069.927129699 7979520.407621077 8069919.89339975 7374092.966137407 8302488.954973977 0.9651433796081988 0.9344168754001586 0.8582514328171152 0.8416748133275864 0.84491532096436 0.9786306216356979 0.9610997919895562 0.9719880311993795 0.888178593928707 1.0 22.98511246779713 -6.272476846467713 24.935139480897732 0.9582986853653787 0.8870860319314169 0.38347283434003054 0.04502177419468483 835.350182831569 1887164.2882914385 0.01699851541475775 0.015129488461875815 5.339777407590374e-07 6.272476846467713 -0.07121265343396177 TAQALSSGSGS(ph)QETKIPISLVLR ddPTM_KYSE-520_SHP099_60min_R1 2 TAQALSSGSGSQETKIPISLVLR 23 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 TAQALSS(0.008)GS(0.004)GS(0.988)QETKIPISLVLR;TAQALS(0.001)S(0.005)GS(0.019)GS(0.975)QETKIPISLVLR 192.22 2.7846e-15 1200720000.0 414770.0 545100.0 399400.0 260040.0 300650.0 381450.0 266070.0 342770.0 537560.0 293240.0 True False 391761.8812765038 518912.5777882194 425145.9630625947 284754.1234161234 324309.44453549996 379069.2290583072 292966.95219296124 341581.0108731194 439952.65478483285 290642.12173726794 1.347918460458547 1.7854004598043134 1.4627816522992299 0.9797414143347497 1.1158377271573399 1.3042473912331771 1.0079989453758353 1.175263271653029 1.5137264074287804 1.0 18.148884277262184 -5.078936994356497 5.851490944990307 1.1639048791696676 1.5806414357922034 0.48041877124988697 0.18063402181582527 0.173635253016458 9.96300206406503 0.047986155720595065 0.08538531107739959 8.338021404043804e-06 5.078936994356497 0.41673655662253584 TAQSPAMVGS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 4 TAQSPAMVGSPIR 13 0 Q5VWG9 Q5VWG9 TAF3 Transcription initiation factor TFIID subunit 3 1 TAQSPAMVGS(1)PIR;TAQSPAMVGS(1)PIR;TAQSPAMVGS(1)PIR;TAQSPAMVGS(1)PIR 213.55 3.2604999999999994e-11 1647900000.0 1200500.0 1215230.0 999000.0 828780.0 967920.0 1171340.0 959530.0 1146680.0 1236530.0 1204530.0 True False 1133905.8718625815 1156848.5267025826 1063397.1384565146 907547.0020182063 1044089.797288545 1164029.2325734878 1056528.6565103622 1142702.434717125 1012007.3223846452 1193858.8013101597 0.9497822276957837 0.9689994540669621 0.8907227029607903 0.7601795128722506 0.8745504879997067 0.9750141568634947 0.8849695251657154 0.9571504046065624 0.8476775656166812 1.0 20.187200787254014 -6.213898080216764 24.971782939510874 0.9272847875989917 0.8862558159857088 0.09692144626563226 0.06596950975951744 1175.3350203315092 617362.6472040429 0.02312193734987473 0.023121875969425165 6.110854169777754e-07 6.213898080216764 -0.041028971613282894 TAQVPS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 7 TAQVPSPPR 9 0 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 TAQVPS(1)PPR;TAQVPS(1)PPR;TAQVPS(1)PPR;TAQVPS(1)PPR;TAQVPS(1)PPR;TAQVPS(1)PPR;TAQVPS(1)PPR 137.4 0.00045864 21046300000.0 11735070.0 13219980.0 10261070.0 8192870.0 8932930.0 12257130.0 9634690.0 11265300.0 13456730.0 13146260.0 True False 11084102.273817929 12584872.317205463 10922514.990492491 8971517.901523825 9635900.769580921 12180628.705118483 10608658.490712987 11226223.303640788 11013327.048557758 13029794.36403553 0.8506736149583415 0.9658534866783371 0.83827224630962 0.6885387175630918 0.7395282304821066 0.9348289285930029 0.8141846443866149 0.8615810035058644 0.8452418158613794 1.0 23.635310979711814 -9.070199020663638 0.7308332583353713 1.0063772744337447 0.8324891454735764 0.2902344185060134 0.0766696727400895 8.67229793541659 4.676497487632295 0.24584291111415074 0.030042254289227036 8.507480833289777e-10 9.070199020663638 -0.17388812896016825 TAQVPS(ph)PPRGK ddPTM_KYSE-520_SHP099_60min_R1 1 TAQVPSPPRGK 11 1 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 TAQVPS(1)PPRGK 65.472 0.038173 0.0 654110.0 767370.0 660760.0 295810.0 393840.0 426550.0 308330.0 333180.0 758060.0 399910.0 True False 617825.2143640425 730504.3933541476 703353.6468533804 323923.6934614803 424832.9673569311 423887.7432293112 339499.00541081623 332024.2763447963 620415.4131374923 396367.1085252717 1.558719684543782 1.842999526555246 1.774500536813679 0.8172315171828327 1.0718169046305832 1.0694321857492997 0.8565266847543439 0.8376685885469404 1.5652545324606206 1.0 18.596477723701177 -5.253249599968038 24.987498454082743 1.0203848151593955 1.7371659399941386 0.6928032271840556 0.2117293525869479 324.7916842110878 990956.3589861961 0.05649536721573323 0.09576242633980515 5.581493200778719e-06 5.253249599968038 0.7167811248347431 TAS(ph)APNLAETEK ddPTM_KYSE-520_SHP099_60min_R1 2 TASAPNLAETEK 12 0 Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-4 PPFIBP1 Liprin-beta-1 1 TAS(1)APNLAETEK;TAS(1)APNLAETEK 229.23 1.8281e-11 290170000.0 648310.0 650090.0 495610.0 519160.0 548140.0 585860.0 554400.0 705500.0 651330.0 729020.0 True False 612346.9519260555 618858.7005950155 527557.8136040379 568500.8103088539 591275.4995100246 582203.430426268 610444.162422587 703052.785164938 533064.8906931422 722561.4499689772 0.8474669551667146 0.856478989602318 0.7301217268464686 0.7867854150443012 0.8183047954404579 0.8057493663013223 0.8448335604519119 0.9730006841565144 0.7377433306413302 1.0 19.46276076072922 -7.012523120204334 8.723120613049495 0.8950531866612921 0.8072868379206234 0.25868743299635544 0.07236717642956146 0.2709744194559266 150.95406356739153 0.03104153718836765 0.019184038487756128 9.715762271371966e-08 7.012523120204334 -0.08776634874066869 TAS(ph)APNLAETEKETAEHLDLAGASSR ddPTM_KYSE-520_SHP099_60min_R1 4 TASAPNLAETEKETAEHLDLAGASSR 26 1 Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-4 PPFIBP1 Liprin-beta-1 1 T(0.177)AS(0.764)APNLAET(0.057)EKET(0.002)AEHLDLAGASSR;T(0.011)AS(0.989)APNLAETEKETAEHLDLAGASSR;T(0.139)AS(0.861)APNLAETEKETAEHLDLAGASSR;T(0.029)AS(0.971)APNLAETEKETAEHLDLAGASSR 238.11 3.8596e-29 2830400000.0 1255560.0 1404360.0 1188990.0 1395010.0 1295660.0 1166540.0 1163500.0 1301250.0 1528690.0 1377130.0 True False 1185911.5839031916 1336892.4376126644 1265634.197851264 1527591.3309749498 1397621.070703029 1159259.1911539577 1281117.9346657284 1296736.2674640338 1251118.4311388968 1364929.6995909272 0.868844442507634 0.979458823420235 0.9272522960197712 1.1191721679385924 1.0239509559517237 0.8493178743941102 0.9385962771926514 0.9500388685605338 0.9166174869766993 1.0 20.380395216686622 -6.229945535581967 24.998918417674314 0.9282716207588114 0.987884404452037 0.12371493967308866 0.0696777737334132 1404.7127848781977 1115021.9258979098 0.023815172298934893 0.023812603674634572 5.889175062549646e-07 6.229945535581967 0.059612783693225535 TAS(ph)APNLAETEKETAEHLDLAGASSRPK ddPTM_KYSE-520_SHP099_60min_R1 4 TASAPNLAETEKETAEHLDLAGASSRPK 28 2 Q86W92-4;Q86W92;Q86W92-3;F5GZP6 Q86W92-4 PPFIBP1 Liprin-beta-1 1 T(0.039)AS(0.953)APNLAET(0.008)EKETAEHLDLAGASSRPK;T(0.033)AS(0.967)APNLAETEKETAEHLDLAGASSRPK;T(0.049)AS(0.951)APNLAETEKETAEHLDLAGASSRPK;TAS(1)APNLAETEKETAEHLDLAGASSRPK 278.7 5.2386e-42 8139250000.0 1387050.0 1682860.0 1393980.0 1691460.0 1533650.0 1139610.0 1034090.0 1196260.0 1737600.0 1340290.0 True False 1310107.571484377 1602012.8795756404 1483838.1812468595 1852215.849844006 1654339.5297251611 1132497.2712731333 1138625.90894584 1192110.4532691825 1422095.6413314329 1328416.0733298399 0.9862177956040757 1.205957163375776 1.1169980633608525 1.394304003866196 1.2453474200883115 0.8525169892249107 0.8571304817862772 0.8973923736717591 1.0705197489569465 1.0 20.341275653444974 -6.258343798532726 24.990868499695836 0.9242000987404002 1.19798514954154 0.5531533243785358 0.11391342771923951 206.66716825197165 1668444.7272660814 0.039898492760931846 0.0382625892378208 5.516405737098083e-07 6.258343798532726 0.2737850508011397 TAS(ph)EGDGGAAAGAAAAGAR ddPTM_KYSE-520_SHP099_60min_R1 8 TASEGDGGAAAGAAAAGAR 19 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.179)AS(0.821)EGDGGAAAGAAAAGAR;T(0.001)AS(0.999)EGDGGAAAGAAAAGAR;T(0.01)AS(0.99)EGDGGAAAGAAAAGAR;TAS(1)EGDGGAAAGAAAAGAR;TAS(1)EGDGGAAAGAAAAGAR;TAS(1)EGDGGAAAGAAAAGAR;TAS(1)EGDGGAAAGAAAAGAR;TAS(1)EGDGGAAAGAAAAGAR 380.17 4.8042999999999984e-92 4170830000.0 4085105.0 4625168.0 3537717.0 3126449.0 3330951.0 4689298.0 3540599.0 4769590.0 5014570.0 4961170.0 True False 3858496.0821950817 4402967.986761291 3765763.8983673346 3423585.772958834 3593077.893181332 4660030.351775228 3898517.29983631 4753045.405520678 4104050.495022662 4917217.893531851 0.784690889389014 0.8954185236641621 0.7658322205572489 0.6962444713833502 0.7307135805203379 0.9476965334208742 0.7928298855668878 0.9666127286677438 0.834628561085561 1.0 22.229410855121884 -6.260614984809415 24.99988344402859 0.8990466096857163 0.7764552363677484 0.444201170306745 0.07444076222168439 80.88688622338009 2452929.471661764 0.025713278961150034 0.024309263615005836 5.487632445482322e-07 6.260614984809415 -0.12259137331796788 TAS(ph)EINFDK ddPTM_KYSE-520_SHP099_60min_R1 9 TASEINFDK 9 0 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 TAS(1)EINFDK;T(0.171)AS(0.829)EINFDK;TAS(1)EINFDK;TAS(1)EINFDK;TAS(1)EINFDK;TAS(1)EINFDK;TAS(1)EINFDK;T(0.002)AS(0.998)EINFDK;T(0.001)AS(0.999)EINFDK 213.84 7.3521999999999995e-09 12683840000.0 15280380.0 14000110.0 13097260.0 14425180.0 14286690.0 15445890.0 15583570.0 18249670.0 17114630.0 17934480.0 True False 14432746.860717649 13327523.701006465 13941530.33595693 15796144.770111488 15410971.222853431 15349486.47114803 17158909.33658686 18186366.154274985 14007044.616712827 17775594.4600143 0.811941726797588 0.7497652880744076 0.7843074034636653 0.8886422789203744 0.8669736057221591 0.8635146636404353 0.9653072011282292 1.0231087458247714 0.7879930343945054 1.0 24.083394472167278 -5.682703188288204 0.7989792635945586 0.9421425464333606 0.7659718838998448 0.47176037905566726 0.06563271873560583 0.6143871596352758 0.8336617539099213 0.034877170635627314 0.06596662301618185 2.0763320690506595e-06 5.682703188288204 -0.17617066253351576 TAS(ph)EINFDKLQFEPPLR ddPTM_KYSE-520_SHP099_60min_R1 2 TASEINFDKLQFEPPLR 17 1 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 T(0.454)AS(0.546)EINFDKLQFEPPLR;T(0.236)AS(0.764)EINFDKLQFEPPLR 62.589 0.017327000000000002 871557000.0 371280.0 392650.0 352670.0 279290.0 340350.0 334040.0 344820.0 370590.0 482740.0 405510.0 True False 350684.35827166965 373786.50462033454 375403.6724919507 305833.6376283997 367133.6086733995 331955.1324541531 379677.770718897 369304.5097863559 395086.58488509245 401917.4968820059 0.872528220324339 0.930008042745325 0.934031674172575 0.7609363613204073 0.9134551531633912 0.825928542622288 0.9446659418023844 0.9188565132181233 0.9830041935225357 1.0 18.616539858789036 -7.49444562374004 1.2471811781806048 0.9982965027997169 0.8767167054394247 0.4245986720545668 0.051650751696553386 0.45947153346256486 1.2752302770887856 0.047109556812396564 0.01624178321418231 3.2029811018659036e-08 7.49444562374004 -0.12157979736029223 TAS(ph)EINFDKLQFEPPLRK ddPTM_KYSE-520_SHP099_60min_R1 1 TASEINFDKLQFEPPLRK 18 2 Q9Y4K4 Q9Y4K4 MAP4K5 Mitogen-activated protein kinase kinase kinase kinase 5 1 T(0.085)AS(0.915)EINFDKLQFEPPLRK 55.208 0.040755 4724000000.0 674460.0 719370.0 793300.0 621460.0 710530.0 761460.0 942880.0 1049900.0 1169400.0 1032600.0 True False 637046.3592973228 684810.3854036158 844437.3873248784 680523.3715512375 766444.6686373163 756707.4456907553 1038195.5120220232 1046258.1419485012 957066.4381750579 1023451.9673506445 0.6224487124162854 0.6691182461413874 0.8250874630793161 0.6649294673914908 0.7488819144306017 0.7393678158141641 1.014405702604241 1.0222835807887436 0.935135667043139 1.0 19.96501196470835 -6.731739249781326 5.898879803499034 0.9955084722815415 0.7127711899342074 0.858071807733358 0.056083826277016885 0.0635758676099455 6.341735805510397 0.022660818293761015 0.016906011363826218 1.8546448171451035e-07 6.731739249781326 -0.2827372823473341 TAS(ph)EPNLK ddPTM_KYSE-520_SHP099_60min_R1 3 TASEPNLK 8 0 P56524-2;P56524;Q9UQL6-2;Q9UQL6;Q9UQL6-3;Q9UKV0-10;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UKV0-5;Q9UKV0-7 P56524-2;Q9UKV0-10 HDAC4;HDAC5;HDAC9 Histone deacetylase 4;Histone deacetylase 5;Histone deacetylase 9 1 T(0.001)AS(0.999)EPNLK;TAS(1)EPNLK;TAS(1)EPNLK 97.81299999999999 0.003093 1268960000.0 1939430.0 1910470.0 1943350.0 1367240.0 1572510.0 2296310.0 1486640.0 1714910.0 2162700.0 1993440.0 True False 1831845.9517421473 1818688.1535260684 2068621.4504699379 1497182.0785243062 1696257.5906420064 2281977.8775170553 1636924.0794082172 1708961.3774730018 1770008.1972303696 1975779.6724728507 0.927150925411355 0.9204913780947198 1.0469899449268492 0.7577677305741585 0.8585256819243415 1.1549758858795083 0.8284952528939992 0.8649554407724502 0.8958530254616188 1.0 20.913990644205576 -9.923323022229669 4.446025006630948 1.0000011386335408 0.9175828563838471 0.051538481108788226 0.10649352482013837 47352657.65348298 523.514103788265 652.5503230208132 0.025867493197309542 1.1931003628100527e-10 9.923323022229669 -0.08241828224969372 TAS(ph)ESNVYLNSFHYPDHSYK ddPTM_KYSE-520_SHP099_60min_R1 3 TASESNVYLNSFHYPDHSYK 20 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;E9PGF6;A0A1W2PRT1;A0A1W2PRJ2 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 T(0.186)AS(0.787)ES(0.027)NVYLNSFHYPDHSYK;T(0.009)AS(0.99)ES(0.001)NVYLNSFHYPDHSYK;T(0.033)AS(0.958)ES(0.008)NVYLNSFHYPDHSYK 216.64 5.6927e-19 1310180000.0 435840.0 655121.0 851693.0 1722510.0 480529.0 483525.0 773280.0 558131.0 664473.0 719843.0 True False 411663.08637450024 623648.0038033309 906594.4935369813 1886216.8325084867 518343.8984639926 480507.1411205079 851450.6888855305 556194.9738297544 543821.4532012091 713465.751049379 0.5769906765237411 0.8741106393489212 1.2706909787940694 2.643738441171427 0.7265154602047856 0.6734831215286352 1.193400927280953 0.7795678671494634 0.7622250295845963 1.0 19.444484651191605 TAS(ph)FGNILDVPEIVISGNGQPR ddPTM_KYSE-520_SHP099_60min_R1 1 TASFGNILDVPEIVISGNGQPR 22 0 O43318-3;O43318 O43318-3 MAP3K7 Mitogen-activated protein kinase kinase kinase 7 1 T(0.128)AS(0.872)FGNILDVPEIVISGNGQPR 178.22 4.6504000000000003e-10 21784000.0 67160.0 85986.0 60486.0 63353.0 61972.0 78535.0 58315.0 68396.0 86708.0 75507.0 True False 63434.50091985923 81855.1034923828 64385.02434102178 69374.05007222597 66848.84382755357 78044.83393392095 64210.04929955479 68158.75023974637 70964.01293080463 74838.06672355715 0.8476234581817657 1.093762934774167 0.8603245268060217 0.9269888054228526 0.8932465355430037 1.0428494127488517 0.8579864781480663 0.9107497457345689 0.9482341813149342 1.0 16.191484669764144 TAS(ph)FSESR ddPTM_KYSE-520_SHP099_60min_R1 14 TASFSESR 8 0 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.045)AS(0.954)FS(0.001)ESR;TAS(0.993)FS(0.007)ESR;TAS(0.985)FS(0.015)ESR;T(0.007)AS(0.985)FS(0.008)ESR;T(0.001)AS(0.999)FSESR;T(0.002)AS(0.995)FS(0.003)ESR;T(0.001)AS(0.997)FS(0.002)ESR;T(0.001)AS(0.934)FS(0.066)ESR;TAS(0.999)FS(0.001)ESR;TAS(0.999)FS(0.001)ESR;T(0.004)AS(0.995)FS(0.001)ESR;TAS(0.868)FS(0.131)ESR;T(0.018)AS(0.952)FS(0.031)ESR;T(0.042)AS(0.952)FS(0.006)ESR 183.22 8.1833e-06 73736140000.0 26884340.0 23849290.0 24042940.0 23579500.0 24252630.0 24823010.0 24073950.0 25982700.0 28812670.0 25239870.0 True False 25393012.067596883 22703534.309885878 25592786.38246416 25820488.59056481 26161174.002411474 24668080.38696197 26507579.805110488 25892572.078107763 23581015.43630349 25016264.38812174 1.015060109440402 0.9075509419650204 1.0230458866838714 1.0321480533610339 1.0457666099353091 0.9860816948622795 1.0596138333786103 1.035029518252218 0.9426273671579943 1.0 24.57636303600544 -4.80658450604495 24.99600262961883 1.0189850013729647 0.9613052760046248 0.22516161481023989 0.039834412083299256 145.1783756151197 80381.97641722359 0.009966292608849818 0.020746631645441188 1.5610452565462544e-05 4.80658450604495 -0.057679725368339874 TAS(ph)FSESRADEVAPAK ddPTM_KYSE-520_SHP099_60min_R1 3 TASFSESRADEVAPAK 16 1 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 T(0.066)AS(0.857)FS(0.073)ES(0.003)RADEVAPAK;T(0.017)AS(0.981)FS(0.002)ESRADEVAPAK;T(0.004)AS(0.373)FS(0.373)ES(0.25)RADEVAPAK 164.49 8.5632e-08 2492660000.0 1554010.0 1721080.0 1676040.0 1147310.0 1350930.0 1316590.0 1002230.0 1196400.0 2232730.0 1469420.0 True False 1467805.9674578677 1638396.7334062536 1784080.2201588182 1256349.997448671 1457240.505259747 1308372.6734457375 1103545.1892222045 1192249.967641858 1827322.5145430095 1456402.0819914613 1.007830176575148 1.1249618176636604 1.2249915337386053 0.8626395230984274 1.0005756811794302 0.8983595187234896 0.7577201398347592 0.8186269316585939 1.2546827123759376 1.0 20.47397727761735 -5.2688796033872505 24.973215296635818 0.9272123228336343 1.1198312420352379 0.2568154481047754 0.13677239117923654 714.1774821012276 2397146.0633939696 0.038815055445156385 0.05885051248087348 5.3841902420584e-06 5.2688796033872505 0.19261891920160357 TAS(ph)GSSVTSLDGTR ddPTM_KYSE-520_SHP099_60min_R1 5 TASGSSVTSLDGTR 14 0 E5RJY1;E7ESM1;Q92597-3;Q92597-2;Q92597 E5RJY1 NDRG1 Protein NDRG1 1 TAS(1)GSSVTSLDGTR;TAS(0.994)GS(0.005)S(0.001)VTSLDGTR;TAS(0.987)GS(0.012)S(0.001)VTSLDGTR;TAS(1)GSSVTSLDGTR;TAS(0.997)GS(0.003)SVTSLDGTR 255.37 1.7683e-19 13579300000.0 8517490.0 8021500.0 6735610.0 6397380.0 6564590.0 8574270.0 7405630.0 8679600.0 10676800.0 8604490.0 True False 8045007.850504632 7636135.09948303 7169798.197957047 7005385.0717575755 7081185.88559222 8520754.800466029 8154263.352383821 8649492.493433874 8738162.260225287 8528260.912791919 0.9433350987699691 0.8953918246132984 0.8407104650378071 0.8214318421297226 0.8303200333576607 0.999119854281823 0.9561460930625232 1.01421527576157 1.0246124443869356 1.0 23.0238201457694 -6.269869048395689 24.90014556932265 0.9970401567123252 0.8639501065021732 0.7646836173350864 0.03675602290447863 318.729656221365 941483.3148529662 0.014221461465556822 0.012746490965615006 5.371937504861216e-07 6.269869048395689 -0.13309005021015197 TAS(ph)LELDLFPEAK ddPTM_KYSE-520_SHP099_60min_R1 2 TASLELDLFPEAK 13 0 H7C446 H7C446 PPAN 1 TAS(1)LELDLFPEAK;T(0.116)AS(0.884)LELDLFPEAK 195.1 1.7642e-08 29866000.0 79821.0 105174.0 74684.0 79089.0 82693.0 118105.0 104272.0 141659.0 164911.0 136634.0 True False 75393.17001078148 100121.2831706076 79498.2501386251 86605.59478102518 89200.4686411912 117367.86288617457 114812.83135665234 141167.61799245913 134967.31946800638 135423.52905964348 0.5567213506714678 0.7393197021657293 0.5870342523979886 0.639516599385637 0.6586777738003369 0.8666726063126239 0.8478056372765641 1.042415738038298 0.9966312383468003 1.0 17.047118895097114 -6.591464985263309 1.1641266473842244 1.0157896689220163 0.6276271836286683 0.8888600885707876 0.05751905395288463 0.1422093464487548 0.39285540132902214 0.033908256197783634 0.022587750030156315 2.561739794523538e-07 6.591464985263309 -0.38816248529334796 TAS(ph)LNQRPR ddPTM_KYSE-520_SHP099_60min_R1 5 TASLNQRPR 9 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 T(0.001)AS(0.999)LNQRPR;T(0.017)AS(0.983)LNQRPR;T(0.024)AS(0.976)LNQRPR;TAS(1)LNQRPR;T(0.023)AS(0.977)LNQRPR 129.84 0.00038259 23345690000.0 8144250.0 6578900.0 7098770.0 7082250.0 7069340.0 7429510.0 7085750.0 7586470.0 8220160.0 7820010.0 True False 7692472.217340131 6262839.768869777 7556368.072633582 7755344.910643895 7625656.838957562 7383139.672253202 7802046.760255855 7560154.306265417 6727586.157370511 7750730.795275715 0.9924834729170191 0.8080321629396742 0.9749233036502052 1.0005953135891383 0.9838629466534448 0.952573359502233 1.0066207905209943 0.9754118038615842 0.8679937847242948 1.0 22.885900913906454 TAS(ph)LPGYGR ddPTM_KYSE-520_SHP099_60min_R1 10 TASLPGYGR 9 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;J3QSX6;O14639-4;O14639-3;O14639-5 F8W8M4;J3QSX6 ABLIM1 Actin-binding LIM protein 1 1 T(0.001)AS(0.999)LPGYGR;TAS(1)LPGYGR;TAS(1)LPGYGR;T(0.002)AS(0.998)LPGYGR;TAS(1)LPGYGR;TAS(1)LPGYGR;TAS(1)LPGYGR;TAS(1)LPGYGR;TAS(1)LPGYGR;TAS(1)LPGYGR 224.68 3.0312e-09 14936120000.0 13577480.0 10445110.0 9565240.0 8650680.0 9246650.0 9097740.0 8127680.0 9054320.0 11091250.0 8775750.0 True False 12824310.118364641 9943311.237170244 10181830.675325125 9472838.026278228 9974308.748758305 9040957.630024692 8949305.212912722 9022912.677214183 9077358.58765957 8698003.682430185 1.4743969520580362 1.1431716518188602 1.17059397156755 1.0890818597160628 1.1467354019297822 1.0394290414347913 1.0288918629673796 1.0373544328844455 1.0436140198463786 1.0 23.052252888912847 -1.0000000000000329 0.6595449593495014 1.0466633840590758 39.37457863445759 0.8902079906113938 0.043475006348499164 71.05807165512785 0.4422632551829204 0.017950826120837586 3984.6548599535254 0.09999999999999243 1.0000000000000329 38.32791525039852 TAS(ph)NPKVENEDEPVR ddPTM_KYSE-520_SHP099_60min_R1 8 TASNPKVENEDEPVR 15 1 Q9UBF8-2 Q9UBF8-2 PI4KB Phosphatidylinositol 4-kinase beta 1 T(0.023)AS(0.977)NPKVENEDEPVR;T(0.371)AS(0.629)NPKVENEDEPVR;T(0.127)AS(0.873)NPKVENEDEPVR;T(0.001)AS(0.999)NPKVENEDEPVR;T(0.032)AS(0.968)NPKVENEDEPVR;T(0.108)AS(0.892)NPKVENEDEPVR;T(0.012)AS(0.988)NPKVENEDEPVR;T(0.16)AS(0.84)NPKVENEDEPVR 207.21 2.2299e-12 9191970000.0 11086250.0 9482780.0 9138940.0 7293460.0 7933090.0 8998970.0 8074000.0 8376960.0 10716130.0 8838300.0 True False 10471273.612608524 9027213.014857035 9728050.695221009 7986628.245541295 8557379.049892336 8942804.090231566 8890198.714646421 8347902.280957163 8770350.923653893 8759999.538093353 1.1953509320489801 1.0305038231568038 1.1105081287867689 0.9117156012178986 0.9768698060633554 1.0208681006595122 1.014862920481547 0.9529569316363361 1.0011816650806347 1.0 23.062499363078654 -3.106252427155139 0.8162654163153372 0.9867299677199497 2.280776455144741 0.6401919808428728 0.04563903970331062 8.602809840256569 1.041883181101317 0.01603646603811775 15.5358106884419 0.0007829744183432819 3.106252427155139 1.2940464874247912 TAS(ph)PLPLRPDAPVEK ddPTM_KYSE-520_SHP099_60min_R1 2 TASPLPLRPDAPVEK 15 1 H0YJG4;Q9HCK8-2;Q9HCK8 H0YJG4 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 T(0.124)AS(0.876)PLPLRPDAPVEK;T(0.15)AS(0.85)PLPLRPDAPVEK 87.429 0.0044703 1232220000.0 2892000.0 2686300.0 2203350.0 1983420.0 2018630.0 2275290.0 1930230.0 2345100.0 2728800.0 2409400.0 True False 2731574.994940931 2557246.1157814944 2345381.4664846463 2171923.6404630314 2177484.69656643 2261089.071134031 2125356.485629419 2336965.395450454 2233318.7074500546 2388054.5904848366 1.1438494772375998 1.0708491028516678 0.9821305910801953 0.9094949709763858 0.911823668203642 0.9468330749821643 0.8899949331551573 0.9786063537919332 0.9352042103010021 1.0 21.187404386044797 -4.67971171659778 1.990948964682619 0.9350985553675125 1.1438150864862662 0.8239899163777774 0.03146121002128147 0.1393305994631012 0.9936688790704261 0.008517741994774787 0.039267500724458206 2.0906834598941202e-05 4.67971171659778 0.20871653111875366 TAS(ph)PLPLRPDAPVEKS(ph)PEETATQVPSLESLTLK ddPTM_KYSE-520_SHP099_60min_R1 4 TASPLPLRPDAPVEKSPEETATQVPSLESLTLK 33 2 H0YJG4;Q9HCK8-2;Q9HCK8 H0YJG4 CHD8 Chromodomain-helicase-DNA-binding protein 8 2 T(0.451)AS(0.549)PLPLRPDAPVEKS(0.4)PEET(0.329)AT(0.271)QVPSLESLTLK;T(0.453)AS(0.545)PLPLRPDAPVEKS(0.734)PEET(0.144)AT(0.121)QVPS(0.003)LESLTLK;T(0.419)AS(0.581)PLPLRPDAPVEKS(0.96)PEET(0.033)AT(0.006)QVPSLESLTLK;T(0.43)AS(0.57)PLPLRPDAPVEKS(0.967)PEET(0.028)AT(0.005)QVPSLESLTLK 162.46 3.0509e-10 3508220000.0 437538.0 356924.0 329289.0 372681.0 398101.0 345523.0 306072.0 392279.0 531795.0 384668.0 True False 413266.89492962154 339776.8352861533 350515.49582102883 408100.49018937186 429429.2838151579 343366.462791751 337012.7447348594 390918.27570760687 435234.43346100935 381260.14078717516 1.083949909047306 0.8911942239349421 0.9193604531995689 1.0703990439356716 1.126341932646118 0.900609389911082 0.8839443431958042 1.0253321391019026 1.1415681496691348 1.0 18.54041618542606 -7.524531737833486 24.979432056628685 1.0750061276110616 0.9801635494700716 0.13995258950165923 0.08805575047936695 108.87147168753097 1645060.141907905 0.0609921325654621 0.023429220916973553 2.9886032346569047e-08 7.524531737833486 -0.09484257814099006 TAS(ph)PPALPK ddPTM_KYSE-520_SHP099_60min_R1 5 TASPPALPK 9 0 Q13029-5;Q13029-3;Q13029-2;Q13029 Q13029-5 PRDM2 PR domain zinc finger protein 2 1 TAS(1)PPALPK;T(0.003)AS(0.997)PPALPK;TAS(1)PPALPK;T(0.1)AS(0.9)PPALPK;TAS(1)PPALPK 134.84 0.00049528 2632450000.0 6965280.0 6826700.0 6030460.0 4559330.0 4690980.0 6417610.0 5569010.0 7247400.0 7758300.0 7318080.0 True False 6578902.033458563 6498735.084914388 6419193.100677154 4992647.352387449 5060133.437974857 6377555.315498448 6131979.87909995 7222260.460955875 6349588.290827387 7253247.50458009 0.9070284764588953 0.8959759171061981 0.8850095211315664 0.6883326881145064 0.6976369460410137 0.8792689497320086 0.8454116415064961 0.9957278386536998 0.8754131562197369 1.0 22.790195648555294 -7.054438412353427 2.44475152913607 0.9521388153524251 0.8188474640855998 0.34323777196091276 0.08035695361967335 0.38866630629528426 4.556475294190611 0.04954827560247871 0.026086617919303466 8.821888971770847e-08 7.054438412353427 -0.13329135126682523 TAS(ph)PPGPPPYGK ddPTM_KYSE-520_SHP099_60min_R1 4 TASPPGPPPYGK 12 0 P54259 P54259 ATN1 Atrophin-1 1 TAS(1)PPGPPPYGK;TAS(1)PPGPPPYGK;TAS(1)PPGPPPYGK;T(0.004)AS(0.996)PPGPPPYGK 193.15 7.0128e-08 4618400000.0 3497180.0 3924950.0 3109830.0 2436280.0 2636190.0 3443060.0 2958180.0 3390660.0 4149790.0 3369430.0 True False 3303184.4539445117 3736389.5105299423 3310294.617703927 2667823.3187057115 2843643.155130681 3421570.5854017367 3257221.703454639 3378898.591845989 3396292.7436928963 3339579.4715768704 0.9891019159920833 1.1188203611653258 0.9912309755997166 0.7988500772062862 0.8514973754428967 1.0245513288492434 0.97533888059165 1.0117736740819505 1.016982159759548 1.0 21.67123501559618 -9.272608552434292 14.389199104170638 0.9999999999999971 0.9737206740883402 0.007111283183872774 0.08545252122888027 0.0 0.0 0.09193768857429989 0.022298164762763556 5.338158289814396e-10 9.272608552434292 -0.026279325911656937 TAS(ph)PPPPPK ddPTM_KYSE-520_SHP099_60min_R1 12 TASPPPPPK 9 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 TAS(1)PPPPPK;T(0.009)AS(0.991)PPPPPK;T(0.019)AS(0.981)PPPPPK;TAS(1)PPPPPK;T(0.001)AS(0.999)PPPPPK;TAS(1)PPPPPK;T(0.001)AS(0.999)PPPPPK;TAS(1)PPPPPK;T(0.147)AS(0.853)PPPPPK;T(0.001)AS(0.999)PPPPPK;TAS(1)PPPPPK;T(0.045)AS(0.955)PPPPPK 133.23 0.0005219 49461200000.0 56083540.0 59203230.0 43574470.0 36216820.0 37917770.0 58129370.0 42409960.0 54292390.0 61681190.0 59038360.0 True False 52972474.23643479 56359017.96494009 46383350.057817094 39658855.683816016 40901682.776400596 57766563.03983498 46697172.63812313 54104062.37102902 50481440.752265185 58515326.06154904 0.9052752125266459 0.9631496867275277 0.7926701119127152 0.6777515969423302 0.69899094014068 0.9872039844582516 0.7980331954231095 0.9246135331130163 0.8627045963849974 1.0 25.802311202363256 -6.2706741306848715 24.991788255038525 0.9025195340842714 0.8081713335021454 0.2319655501292066 0.09606356490834102 1299.2982105085287 3516250.672835635 0.03680299450735309 0.03290494237306048 5.361988390243257e-07 6.2706741306848715 -0.09434820058212601 TAS(ph)PPPPPKR ddPTM_KYSE-520_SHP099_60min_R1 12 TASPPPPPKR 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.04)AS(0.96)PPPPPKR;T(0.004)AS(0.996)PPPPPKR;T(0.003)AS(0.997)PPPPPKR;T(0.022)AS(0.978)PPPPPKR;T(0.001)AS(0.999)PPPPPKR;T(0.003)AS(0.997)PPPPPKR;TAS(1)PPPPPKR;T(0.002)AS(0.998)PPPPPKR;T(0.172)AS(0.828)PPPPPKR;T(0.017)AS(0.983)PPPPPKR;T(0.001)AS(0.999)PPPPPKR;TAS(1)PPPPPKR 138.76 0.00025449 132516960000.0 28679220.0 26489170.0 25878790.0 22964150.0 24580820.0 25277500.0 23563670.0 24190000.0 30156010.0 24910890.0 True False 27088326.495992307 25216590.512145195 27546978.210928004 25146655.911576554 26515190.68826581 25119733.746287446 25945715.72285759 24106090.535988454 24680438.755149126 24690198.894979127 1.0971287275251902 1.0213198613508583 1.1157049940383355 1.0184873770575518 1.0739156375794854 1.0173969781748364 1.0508508187082195 0.9763425008654161 0.9996046957794258 1.0 24.557435122549027 -6.75644153866129 0.8475641613358887 0.9892959688737616 1.06730470429714 0.46643164069006093 0.031658489261154 0.5318240827820779 0.7504246067121318 0.023382219527639688 0.01387533021440717 1.752098272150222e-07 6.75644153866129 0.07800873542337838 TAS(ph)PWK ddPTM_KYSE-520_SHP099_60min_R1 12 TASPWK 6 0 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3;A0A1B0GTD1 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 TAS(1)PWK;T(0.001)AS(0.999)PWK;TAS(1)PWK;TAS(1)PWK;TAS(1)PWK;T(0.007)AS(0.993)PWK;TAS(1)PWK;TAS(1)PWK;TAS(1)PWK;TAS(1)PWK;TAS(1)PWK;TAS(1)PWK 150.88 0.0068281999999999995 91272820000.0 78954500.0 68380570.0 64125980.0 59720060.0 64872190.0 59742340.0 60217570.0 62041490.0 73397060.0 59084830.0 True False 74574736.49310644 65095464.775871806 68259643.27599564 65395836.54690929 69977262.28072982 59369465.89576416 66304949.64244865 61826282.55178264 60070004.09331356 58561384.37350222 1.2734455868985557 1.1115766041440462 1.1656084296204186 1.1167057822577622 1.1949386618734552 1.0137988801136946 1.1322298875238037 1.0557517246767432 1.0257613397625545 1.0 25.803446323113192 -1.0000000246652456 0.14214229337536738 0.9649897143827662 1.8754048429884949 0.6268414557032898 0.05072266641931205 48.8282683868032 0.4617280519968925 0.20093941014369426 9.061256948779285 0.09999999432061747 1.0000000246652456 0.9104151286057287 TAS(ph)QGPQTDSVIQNSENIK ddPTM_KYSE-520_SHP099_60min_R1 3 TASQGPQTDSVIQNSENIK 19 0 Q9NZN5;E9PMR6;Q9NZN5-2 Q9NZN5;Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 T(0.001)AS(0.999)QGPQTDSVIQNSENIK;T(0.005)AS(0.995)QGPQTDSVIQNSENIK;T(0.115)AS(0.885)QGPQTDSVIQNSENIK 454.38 4.3018999999999986e-142 1230220000.0 1610470.0 2115380.0 1580880.0 1470940.0 1480350.0 2381130.0 1718050.0 2193840.0 2439400.0 2486210.0 True False 1521134.018707647 2013753.9695498862 1682786.0542974314 1610737.6953457636 1596845.1229606778 2366268.484434676 1891727.2605521744 2186230.0810861033 1996466.4522697416 2464184.113642108 0.6172972264070739 0.8172092167957051 0.6828978585574288 0.6536596378608515 0.648021839813143 0.9602644832156185 0.7676890903075289 0.8872024086929188 0.8101937031478255 1.0 21.232678621588796 -6.251983932661736 24.986018353224633 0.870683785837908 0.6895013312922732 0.6104252145167682 0.07991166239543625 498.28681774369653 1316723.7429016968 0.025646453543035217 0.025326163738704763 5.597783109019186e-07 6.251983932661736 -0.18118245454563475 TAS(ph)TDLK ddPTM_KYSE-520_SHP099_60min_R1 2 TASTDLK 7 0 E7EX40;Q6WKZ4-2;Q6WKZ4-3;Q6WKZ4 E7EX40 RAB11FIP1 Rab11 family-interacting protein 1 1 TAS(0.946)T(0.054)DLK;TAS(0.958)T(0.042)DLK 120.31 0.0025218000000000003 795070000.0 2458940.0 2448940.0 1602700.0 2044170.0 2083220.0 2454810.0 2298920.0 1687550.0 2448230.0 2092140.0 True False 2322537.696424634 2331289.24646612 1706012.6064106692 2238447.3021978773 2247157.5620996007 2439488.620224467 2531317.2688970705 1681696.2829271324 2003693.146855925 2073605.267260292 1.1200481273339158 1.1242685786317892 0.8227277550585618 1.079495378189977 1.0836959172410914 1.17644792803193 1.22073246478657 0.8110011627955781 0.9662847497987228 1.0 20.983709857320157 -7.268146941362732 24.99877453839905 0.9164822257983513 1.083418616055545 0.3193260174801723 0.10912239412898166 698.1752718669454 2602049.682309513 0.0613046904921771 0.030493259341823738 5.3932811267559384e-08 7.268146941362732 0.16693639025719376 TAS(ph)TPT(ph)PPQTGGGLEPQANGETPQVAVIVRPDDR ddPTM_KYSE-520_SHP099_60min_R1 1 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13;C9J2Z7;C9K073;C9J556;C9JSU8;C9JWW9;C9JWH7 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 2 T(0.068)AS(0.466)T(0.466)PT(0.977)PPQT(0.023)GGGLEPQANGETPQVAVIVRPDDR 109.59 0.00021533 733360000.0 78449.0 86586.0 84452.0 81428.0 73848.0 78132.0 78869.0 80546.0 97239.0 67797.0 True False 74097.27758579557 82426.27859176433 89895.91104797756 89166.89263777906 79659.41746235693 77644.34920640624 86841.84820726387 80266.60472557778 79582.84879571098 67196.3713252678 1.102697602927449 1.2266477633557817 1.3378090107400498 1.326959936663272 1.185472011230503 1.1554842571865143 1.2923591928335094 1.194508023908654 1.1843325350186804 1.0 16.03609570760723 -8.581755538622051 0.8668429742608955 0.998080013909297 1.237198766495285 0.4846336955598465 0.07044205395037999 1.9195311350576783 2.0845239997249405 0.07876180744266358 0.02467808558345173 2.6196571802951987e-09 8.581755538622051 0.23911875258598803 TAS(ph)TPTPPQTGGGLEPQANGETPQVAVIVRPDDR ddPTM_KYSE-520_SHP099_60min_R1 1 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13;C9J2Z7;C9K073;C9J556;C9JSU8;C9JWW9;C9JWH7 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 T(0.004)AS(0.497)T(0.497)PT(0.002)PPQTGGGLEPQANGETPQVAVIVRPDDR 133.23 7.0944e-06 841520000.0 90256.0 76559.0 64331.0 62667.0 80553.0 77779.0 53620.0 88420.0 101300.0 93308.0 True False 85249.31975912456 72880.99072259813 68477.87919323929 68622.8528384793 86892.06281612543 77293.55241034484 59040.43288077048 88113.29165738309 82906.47356519016 92481.36371252556 0.9217999858232896 0.7880613757939993 0.7404505777628875 0.7420181762434923 0.9395629489874928 0.8357743582870232 0.6384035713865032 0.9527680834300796 0.8964668149023132 1.0 16.496875051250413 TASAETPRPSQLAQPSPFQLSAS(ph)VPK ddPTM_KYSE-520_SHP099_60min_R1 1 TASAETPRPSQLAQPSPFQLSASVPK 26 1 O60292;M0R2Q7 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 TASAETPRPSQLAQPSPFQLS(0.002)AS(0.998)VPK 149.49 6.2842e-07 241870000.0 157670.0 206190.0 207940.0 173250.0 175200.0 225950.0 171740.0 227920.0 233220.0 282900.0 True False 148923.73079264746 196284.3229025004 221344.1451157637 189715.62791048794 188987.24324836046 224539.76223810302 189101.15522087892 227129.3987169278 190873.1269977655 280393.7260928698 0.5311236198748688 0.7000310800017281 0.789404770927192 0.6766043968032716 0.674006675833273 0.8008016633144378 0.6744129330420408 0.8100373780891936 0.6807325172980011 1.0 18.097094543343243 -13.999999999999739 0.16176678838649142 2.073980221806545 0.6343494476060009 0.6118420437080438 0.07362838840387956 90.82636282241886 0.8383660642927759 31.357979706107074 0.2993101916726682 1.0000000000006013e-14 13.999999999999739 -1.4396307742005439 TASESISNLS(ph)EAGS(ph)IK ddPTM_KYSE-520_SHP099_60min_R1 9 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 2 TASESIS(0.027)NLS(0.973)EAGS(1)IK;TASES(0.002)IS(0.156)NLS(0.843)EAGS(1)IK;TASESIS(0.162)NLS(0.838)EAGS(1)IK;TASESISNLS(1)EAGS(1)IK;TASESIS(0.002)NLS(0.998)EAGS(1)IK;TASESISNLS(1)EAGS(1)IK;TASESISNLS(1)EAGS(1)IK;TASESISNLS(1)EAGS(1)IK;TASESIS(0.001)NLS(0.999)EAGS(1)IK 301.93 5.8696e-38 6271010000.0 12964920.0 11116690.0 10630100.0 11617100.0 10103730.0 10793460.0 10221750.0 12058320.0 13167580.0 12661180.0 True False 12245730.042672724 10582627.525908133 11315333.254761353 12721185.691191534 10898836.06864018 10726094.012509303 11255064.244666453 12016492.502353035 10776679.399679417 12549011.795448987 0.9758322202799864 0.8433036559696293 0.9016911800867827 1.0137201158584446 0.868501539905536 0.8547361487379603 0.8968884903549301 0.9575648424134022 0.8587671742875943 1.0 23.581070424089734 -10.551341525999376 5.206393195527243 1.000427581476139 0.9073359434414551 0.20607673846497077 0.0542284016726331 0.00026751571448064854 2.305307333491754e-05 0.05218880496773057 0.012599831926446758 2.8096904414137578e-11 10.551341525999376 -0.0930916380346839 TASESISNLS(ph)EAGS(ph)IKK ddPTM_KYSE-520_SHP099_60min_R1 4 TASESISNLSEAGSIKK 17 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 2 TASESISNLS(1)EAGS(1)IKK;TASESISNLS(1)EAGS(1)IKK;TASESISNLS(1)EAGS(1)IKK;TASESISNLS(1)EAGS(1)IKK 141.45 7.591e-06 4230000000.0 10657900.0 8754400.0 8462500.0 10403800.0 8408200.0 8751500.0 8566600.0 10210100.0 10840200.0 10118300.0 True False 10066685.041003091 8333825.483377705 9008006.290478729 11392574.023983482 9069877.503886217 8696878.6422959 9432595.529959131 10174683.546155248 8871892.93920409 10028659.73391829 1.0037916639006301 0.8310009218072855 0.8982263362682879 1.1360016518909548 0.904395776158469 0.8672024849823028 0.940563921822655 1.0145606507859755 0.8846538993837971 1.0 23.257625476100802 -10.396765292076811 3.095510564872007 1.000754427659345 0.9421512849006836 0.04039751464169572 0.08441308724421809 108772587.60735433 139491563.01203328 760335.0391074831 0.021188919163803128 4.010834185689792e-11 10.396765292076811 -0.05860314275866141 TASESISNLSEAGS(ph)IK ddPTM_KYSE-520_SHP099_60min_R1 7 TASESISNLSEAGSIK 16 0 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASESIS(0.002)NLS(0.01)EAGS(0.989)IK;TASESISNLSEAGS(1)IK;TASESISNLSEAGS(1)IK;TASESISNLSEAGS(1)IK;TASESISNLSEAGS(1)IK;TASESISNLSEAGS(1)IK;TASESISNLSEAGS(1)IK 258.17 3.2388e-29 35258450000.0 29319580.0 29421880.0 21190150.0 19051390.0 21452030.0 27568500.0 21337520.0 26357780.0 33242000.0 28080890.0 True False 27693164.450266305 28008408.721657783 22556100.974438753 20862028.37759072 23140182.715645723 27396434.76548419 23494524.75572728 26266351.013132114 27206090.76262634 27832115.16120185 0.9950075403852437 1.0063341776014814 0.8104343074105307 0.7495667597219676 0.8314201986309431 0.9843461270121144 0.8441516075816904 0.9437425384667701 0.9775071210021367 1.0 24.73024721774702 -7.567765905554828 2.780275252886645 0.9912636049664946 0.8862211528880707 0.1984042661821218 0.08098152607458381 0.5035913809832296 7.453855886108132 0.07350399473560969 0.024124823381526245 2.70541625106271e-08 7.567765905554828 -0.10504245207842389 TASESISNLSEAGS(ph)IKK ddPTM_KYSE-520_SHP099_60min_R1 2 TASESISNLSEAGSIKK 17 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 TASESISNLS(0.008)EAGS(0.992)IKK;TASESISNLSEAGS(1)IKK 242.45 7.900099999999999e-22 2690800000.0 1712630.0 1749760.0 1398250.0 1270290.0 1326740.0 1525360.0 1515350.0 1469010.0 1885390.0 1580050.0 True False 1617626.9998567384 1665698.903156695 1488383.4322791027 1391017.9796733866 1431146.8898820207 1515839.6624364378 1668536.3663908148 1463914.3471795109 1543050.702814154 1566051.9862602977 1.0329331427365964 1.0636293799763008 0.9504048686361517 0.8882323140466818 0.9138565657067185 0.9679370006459581 1.0654412376023659 0.9347801733423361 0.9853125671127494 1.0 20.5787006740828 -4.7636006047528205 24.980598865353144 0.9602907607397422 1.0482812783303823 0.3444506583274367 0.046782701566607326 59.555006160588114 688408.4559675328 0.01315815099437815 0.029746873467263377 1.723452805208371e-05 4.7636006047528205 0.08799051759064014 TASFSES(ph)RADEVAPAK ddPTM_KYSE-520_SHP099_60min_R1 1 TASFSESRADEVAPAK 16 1 P53396;P53396-2;P53396-3 P53396 ACLY ATP-citrate synthase 1 TASFS(0.005)ES(0.994)RADEVAPAK 73.655 0.02562 557380000.0 328580.0 350920.0 387390.0 263650.0 294480.0 327620.0 190600.0 255620.0 510730.0 292170.0 True False 310353.0123920095 334061.2764583411 412361.77924591565 288707.2167307372 317653.9006379978 325575.20205553144 209867.70807674117 254733.31388215628 417994.3064555727 289581.6011048203 1.07172904358544 1.1535997977213353 1.4239916406037565 0.9969805251067501 1.0969408948153998 1.1242951928347218 0.7247273558680788 0.8796598710356258 1.4434422106267402 1.0 18.14361041650549 -5.3614561100893114 20.350995359754897 1.0259846304774343 1.2104868469195595 0.1506110695695021 0.19254444457142397 16.46912683960406 3341.0530825907917 0.05540880731924548 0.08218446926456505 4.350547251501911e-06 5.3614561100893114 0.18450221644212528 TASIKPEVALLDTQDMENMS(ph)DDDGWEFVNLGDQQSFGIK ddPTM_KYSE-520_SHP099_60min_R1 5 TASIKPEVALLDTQDMENMSDDDGWEFVNLGDQQSFGIK 39 1 H0Y8C6;O00410-2;O00410;O00410-3 H0Y8C6 IPO5 Importin-5 1 TASIKPEVALLDT(0.127)QDMENMS(0.873)DDDGWEFVNLGDQQSFGIK;TASIKPEVALLDT(0.001)QDMENMS(0.999)DDDGWEFVNLGDQQSFGIK;TASIKPEVALLDT(0.004)QDMENMS(0.996)DDDGWEFVNLGDQQSFGIK;TASIKPEVALLDTQDMENMS(1)DDDGWEFVNLGDQQSFGIK;TASIKPEVALLDT(0.014)QDMENMS(0.986)DDDGWEFVNLGDQQSFGIK 271.63 4.0273e-42 533200000.0 332418.0 373843.0 302176.0 331087.0 338499.0 311319.0 278447.2 344146.0 411241.0 310268.7 True False 313978.1108811458 355883.021130217 321654.7484586947 362553.4089350638 365136.9455041485 309375.94264308084 306595.3603587927 342952.2378502799 336570.0009419778 307519.9607033963 1.0210007511804362 1.1572680365729722 1.045963805806191 1.178958946618582 1.1873601462128305 1.0060353218550084 0.996993364780326 1.1152194383279663 1.0944655435443436 1.0 18.230320531305562 -6.274970191867161 24.85070987171448 1.046897115299454 1.1196581061453708 0.2717652665810829 0.06161890701256304 1108.80495771427 2036427.527385789 0.022259904094620725 0.019733444220079048 5.309208831400166e-07 6.274970191867161 0.0727609908459168 TASIS(ph)SS(ph)PSEGTPTVGSYGCTPQSLPK ddPTM_KYSE-520_SHP099_60min_R1 1 TASISSSPSEGTPTVGSYGCTPQSLPK 27 0 Q6PKG0;Q6PKG0-3 Q6PKG0 LARP1 La-related protein 1 2 T(0.27)AS(0.385)IS(0.313)S(0.31)S(0.639)PS(0.079)EGT(0.003)PTVGS(0.001)Y(0.001)GCTPQSLPK 128.35 8.0725e-05 615530000.0 93800.0 68326.0 68644.0 59743.0 61438.0 82804.0 71808.0 71825.0 101380.0 90522.0 True False 88596.72701433589 65043.51640058315 73068.9020742833 65420.95675761207 66272.82106559802 82287.18952141573 79067.05341854469 71575.85583908099 82971.94758182601 89720.04550505041 0.9874797378401766 0.7249608048507041 0.8144099979326269 0.7291676725011187 0.7386623657236941 0.9171550132214736 0.8812640806573593 0.7977688312145577 0.9247871767648118 1.0 16.45314273169336 -6.270947315583776 24.862489446684005 0.890122390986311 0.7918100110391759 0.26699428920314394 0.08522212507379358 929.1144891881785 2429553.8078463036 0.029169638880160033 0.02606523745733608 5.358616591367655e-07 6.270947315583776 -0.09831237994713504 TASPLPLRPDAPVEKS(ph)PEETATQVPSLESLTLK ddPTM_KYSE-520_SHP099_60min_R1 2 TASPLPLRPDAPVEKSPEETATQVPSLESLTLK 33 2 H0YJG4;Q9HCK8-2;Q9HCK8 H0YJG4 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 T(0.004)AS(0.003)PLPLRPDAPVEKS(0.831)PEET(0.053)AT(0.09)QVPS(0.015)LES(0.003)LT(0.001)LK;T(0.118)AS(0.118)PLPLRPDAPVEKS(0.762)PEET(0.001)AT(0.002)QVPSLESLTLK 142.83 9.6863e-07 2943990000.0 488480.0 555110.0 445160.0 418220.0 400820.0 509980.0 413840.0 549660.0 625030.0 600640.0 True False 461383.0406392619 528441.6823629026 473855.72588118375 457967.5030575721 432362.2536461635 506797.02565252455 455674.9858891836 547753.3577516086 511540.30772409454 595318.7968908492 0.775018432223056 0.887661678285276 0.79596970288184 0.7692811069453594 0.7262701193112779 0.8513035843977307 0.7654302002036917 0.9201008948690029 0.859271218035947 1.0 19.1833029218905 -7.931213557907839 0.9017104274081222 0.9950341975042649 0.7961527224586713 0.5923033574261793 0.051159686434315815 0.4064953426585354 0.7477885816745208 0.048712909744865085 0.017237512630660486 1.1716190974583288e-08 7.931213557907839 -0.19888147504559361 TASPPPPPKR ddPTM_KYSE-520_SHP099_60min_R1 1 TASPPPPPKR 10 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 0 133.23 0.00076039 505890000.0 213570.0 160950.0 166070.0 164330.0 170300.0 198550.0 164790.0 166430.0 240160.0 186250.0 False True 201722.84635875994 153217.72040912474 176775.1379213949 179947.87379238388 183701.64112554697 197310.77580161722 181448.58139541507 165852.6931750541 196552.9979409284 184599.96990030757 1.092756658994579 0.8299986207574644 0.9576119541994593 0.9747990418934736 0.9951336461471487 1.0688559478540223 0.9829285535279643 0.8984437714947741 1.0647509750249473 1.0 17.494042792183876 -5.483900230906875 2.894629098807464 0.9986505426173736 0.9478492276969835 0.053992357644241595 0.07387101150760071 0.7195400935872927 12.029970986290747 0.021990379425508067 0.03292285541083484 3.2817067406180026e-06 5.483900230906875 -0.050801314920390084 TASRPAPLVQQLS(ph)PSLLPNSK ddPTM_KYSE-520_SHP099_60min_R1 2 TASRPAPLVQQLSPSLLPNSK 21 1 Q9Y6X9-2;Q9Y6X9 Q9Y6X9-2 MORC2 MORC family CW-type zinc finger protein 2 1 TASRPAPLVQQLS(0.999)PS(0.001)LLPNSK;TASRPAPLVQQLS(0.999)PS(0.001)LLPNSK 193.88 1.8155e-13 1407490000.0 1391410.0 1500470.0 1237400.0 1038710.0 1052910.0 1514580.0 1185370.0 1724720.0 1787080.0 1861030.0 True False 1314225.7135929319 1428385.1689486126 1317164.7839100026 1137428.686100452 1135768.0267615956 1505126.9444150755 1305198.7676963625 1718737.3488726723 1462591.3206207303 1844542.7220594303 0.7124940495417748 0.7743844324482883 0.7140874364999198 0.6166453465661743 0.6157450370645314 0.8159892023181781 0.7076001830085612 0.9317959016713386 0.7929289482586493 1.0 20.814831773477263 -7.575191772128045 0.7725765540153767 0.9801817231858044 0.693374555327415 0.6143721931746265 0.0733039526408244 0.41317867821141446 0.5073085948277121 0.07041912312010343 0.029145050988804436 2.659550418425062e-08 7.575191772128045 -0.28680716785838944 TASRPDDIPDSPSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 TASRPDDIPDSPSSPK 16 1 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 TASRPDDIPDS(0.001)PS(0.353)S(0.646)PK 198.51 3.0684e-12 418340000.0 322610.0 276400.0 264170.0 288150.0 337220.0 389740.0 440650.0 490320.0 588880.0 493770.0 True False 304714.1801929091 263121.32911514153 281198.82088694477 315535.68936454353 363757.2954806634 387307.48809328745 485195.2023295687 488619.1943615483 481954.2364567536 489395.58194724744 0.6226336964066721 0.5376454933822915 0.5745838974845007 0.6447456842766421 0.7432786663772402 0.7913996414766078 0.9914172097733985 0.9984135786788062 0.9847948249534956 1.0 18.90064155188279 -6.299381762848731 1.0198993561608696 1.0121900772643422 0.5715933344973692 0.9646564387288683 0.034017913405721925 0.0858713184261408 0.18769268123241892 0.019650196601752042 0.01718812430821343 5.019012035935199e-07 6.299381762848731 -0.440596742766973 TAST(ph)PT(ph)PPQTGGGLEPQANGETPQVAVIVRPDDR ddPTM_KYSE-520_SHP099_60min_R1 2 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13;C9J2Z7;C9K073;C9J556;C9JSU8;C9JWW9;C9JWH7 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 2 T(0.046)AS(0.289)T(0.665)PT(0.902)PPQT(0.099)GGGLEPQANGETPQVAVIVRPDDR;TAS(0.007)T(0.993)PT(0.988)PPQT(0.012)GGGLEPQANGETPQVAVIVRPDDR 170.62 2.4558e-10 913070000.0 424193.0 355446.0 347393.0 374336.0 375526.0 341484.0 324966.0 327212.0 433774.0 340913.0 True False 400662.16868221876 338369.8406246766 369786.50862845243 409912.7808917779 405077.759749337 339352.67168894195 357816.7346425296 326076.97794385464 355011.5761526825 337892.7760463008 1.1857671932806189 1.0014118815559125 1.0943900989992794 1.2131445533940872 1.1988352177550845 1.0043205885006583 1.0589653286742617 0.9650309241863548 1.0506634095782976 1.0 18.36620598127595 -6.279067675798852 24.7864676241617 1.0163085527786115 1.1327551877428885 0.49466845460947306 0.06196868064008968 728.6680118557315 1024548.6847417352 0.02328813287223375 0.020583161772098013 5.259353038821204e-07 6.279067675798852 0.11644663496427698 TAST(ph)PTPPQTGGGLEPQANGETPQVAVIVRPDDR ddPTM_KYSE-520_SHP099_60min_R1 1 TASTPTPPQTGGGLEPQANGETPQVAVIVRPDDR 34 1 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;C9J6B6;C9JF13;C9J2Z7;C9K073;C9J556;C9JSU8;C9JWW9;C9JWH7 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 T(0.04)AS(0.154)T(0.805)PT(0.001)PPQTGGGLEPQANGETPQVAVIVRPDDR 125.42 0.00024894 2343200000.0 152650.0 173660.0 145910.0 73083.0 77779.0 135570.0 80232.0 110920.0 105150.0 103630.0 True False 144182.2001997693 165317.11293102568 155315.59206425442 80028.78634679485 83899.76479802644 134723.85734286203 88342.63354886186 110535.24440892255 86057.41061579199 102711.91882291992 1.4037533506539397 1.609522193972834 1.512147702468938 0.7791577381079615 0.8168454621383668 1.311667223111002 0.8601010920764574 1.0761676509956979 0.8378522337233221 1.0 16.648244077991684 -5.248757547426094 24.429790003714427 0.9629231556664075 1.5185792930709814 0.7294956052520187 0.1544804113487448 290.3320642182677 559282.9625415695 0.04189567597376477 0.07190792447865493 5.639524043625982e-06 5.248757547426094 0.5556561374045739 TAT(ph)PPGYKPGS(ph)PPSFR ddPTM_KYSE-520_SHP099_60min_R1 3 TATPPGYKPGSPPSFR 16 1 P54259 P54259 ATN1 Atrophin-1 2 T(0.458)AT(0.54)PPGY(0.007)KPGS(0.941)PPS(0.053)FR;T(0.185)AT(0.813)PPGY(0.005)KPGS(0.981)PPS(0.017)FR;T(0.05)AT(0.95)PPGYKPGS(0.89)PPS(0.11)FR 97.57 0.0011534000000000002 3351930000.0 2010810.0 1802120.0 1672470.0 1716080.0 1722670.0 1675370.0 1740420.0 1798400.0 2072360.0 1664450.0 True False 1899266.3608496443 1715543.450162732 1780280.0922466146 1879175.727241736 1858234.3283484783 1664913.394383055 1916358.638462338 1792161.7701497166 1696071.663944298 1649704.2679225034 1.1512768668783393 1.0399096877667298 1.079151049592996 1.139098542557697 1.1264045104814937 1.0092193047907336 1.1616376799919639 1.0863533573848434 1.0281064897044763 1.0 20.653775994134122 -7.825915460141255 3.270790622425182 1.0025423884406832 1.098384348648509 0.36406731246975443 0.045877873756704365 0.25352549882136505 5.063693927105926 0.042255853022082096 0.011553522098107444 1.4930850255497217e-08 7.825915460141255 0.09584196020782576 TATCHSSS(ph)SPPIDAASAEPYGFR ddPTM_KYSE-520_SHP099_60min_R1 1 TATCHSSSSPPIDAASAEPYGFR 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.004)AT(0.018)CHS(0.079)S(0.07)S(0.415)S(0.415)PPIDAASAEPYGFR 86.73200000000001 0.0025916 957600000.0 166920.0 243920.0 284510.0 149790.0 172810.0 221020.0 124450.0 176930.0 193670.0 217100.0 True False 157660.61485322946 232201.7170686158 302849.9698320951 164025.9965639943 186409.1638456004 219640.53219679353 137030.62051495476 176316.27112577256 158504.4100233995 215176.662901244 0.7327031320566035 1.0791212854489964 1.4074480278146566 0.7622852513484445 0.8663075322956999 1.0207451367418883 0.6368284490862534 0.819402386617983 0.7366245385827254 1.0 17.71516209256213 TATCHSSSS(ph)PPIDAASAEPYGFR ddPTM_KYSE-520_SHP099_60min_R1 2 TATCHSSSSPPIDAASAEPYGFR 23 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.006)AT(0.005)CHS(0.03)S(0.026)S(0.345)S(0.587)PPIDAASAEPYGFR;TATCHS(0.002)S(0.016)S(0.14)S(0.843)PPIDAASAEPYGFR 176.44 5.446100000000001e-11 2031730000.0 577250.0 808290.0 903270.0 488560.0 529630.0 641340.0 485510.0 531080.0 617130.0 693020.0 True False 545228.7917806534 769458.5351319759 961496.2294830993 534992.5955090793 571308.8678175185 637337.1591670066 534590.0889209784 529237.8074350043 505074.74858130096 686880.3819614005 0.7937754609088439 1.1202220289576066 1.3998015589519792 0.7788730171349447 0.8317443368904128 0.927872124324002 0.7782870248738882 0.7704948653850838 0.735316893370939 1.0 19.38969935459128 -5.309351937653387 24.99807860921071 0.8240067256627771 1.10616256637034 0.3930302434248749 0.15514045981038516 374.596281986111 195442.4948103026 0.04402112127054613 0.065294084949295 4.905102220515673e-06 5.309351937653387 0.28215584070756294 TATDS(ph)DERIDDEIDTEVEETQEEK ddPTM_KYSE-520_SHP099_60min_R1 1 TATDSDERIDDEIDTEVEETQEEK 24 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 TAT(0.001)DS(0.998)DERIDDEIDTEVEETQEEK 241.22 1.2014999999999998e-28 425760000.0 152570.0 142130.0 166700.0 153200.0 168260.0 149270.0 165730.0 158660.0 186170.0 182770.0 True False 144106.6379592454 135301.8614585207 177445.74872943046 167760.0819387403 181501.10473155905 148338.3505611048 182483.60576893107 158109.64549152245 152366.2209637852 181150.79999290852 0.7955064949472302 0.7469018158562774 0.9795471437960909 0.9260797189154427 1.001933774174137 0.8188666600805062 1.0073574379802612 0.8728067747849413 0.8411015627297801 1.0 17.466831651430073 -4.755207031157198 24.999977293446527 0.9275044162249406 0.7712040995752724 0.4846382510078373 0.06582020817183713 119.63163518280464 479868.36621155054 0.016273455262661586 0.040842973345098746 1.7570857994308104e-05 4.755207031157198 -0.15630031664966826 TATDSDERIDDEIDT(ph)EVEETQEEK ddPTM_KYSE-520_SHP099_60min_R1 1 TATDSDERIDDEIDTEVEETQEEK 24 1 A0A0C4DGZ1;Q8N5P1 A0A0C4DGZ1 ZC3H8 Zinc finger CCCH domain-containing protein 8 1 TATDSDERIDDEIDT(1)EVEETQEEK 243.55 4.2492e-28 309850000.0 168620.0 157540.0 134720.0 112550.0 119270.0 147730.0 126430.0 143130.0 155150.0 138590.0 True False 159266.31246436358 149971.54192763913 143404.2667596214 123246.71816060865 128655.87044652963 146807.96227233883 139210.77823789278 142633.51543679315 126978.67101322043 137362.20042138852 1.1594624429120923 1.0917962981633136 1.0439863828600409 0.8972389622656193 0.9366177161682739 1.0687653650128883 1.0134576893121494 1.038375295381362 0.9244076654544383 1.0 17.06762552977766 -4.73165647476046 2.3780234739015493 0.9869985752780442 1.1465760184506348 0.5567420322495991 0.05132615331032237 0.243388514989451 2.655118946236181 0.014941655202005577 0.05336532985774074 1.8549983396990147e-05 4.73165647476046 0.1595774431725906 TATESFAS(ph)DPILYRPVAVALDTK ddPTM_KYSE-520_SHP099_60min_R1 2 TATESFASDPILYRPVAVALDTK 23 1 P14618;P14618-3;H3BUW1;H3BTJ2;H3BT25;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 TAT(0.001)ES(0.039)FAS(0.96)DPILYRPVAVALDTK;TATES(0.008)FAS(0.992)DPILYRPVAVALDTK 122.53 8.275200000000001e-05 719230000.0 510070.0 501350.0 435230.0 446230.0 426200.0 455840.0 414670.0 450090.0 556330.0 481100.0 True False 481775.40030066366 477264.39345830766 463285.6221926219 488639.5650360581 459739.51525371755 452994.9334747373 456588.8903892039 448528.74284179625 455314.49593802774 476837.8282901363 1.0103548244656526 1.0008945707384436 0.9715790038174814 1.0247500010396426 0.9641422890089686 0.9499978957187692 0.9575349590582152 0.9406316282626908 0.9548623639418715 1.0 18.86313916602921 -5.901331150551874 7.1558258583796555 0.9567574030979402 0.9995164026768932 0.5107879047774756 0.01928943500817756 0.17041662411273492 10.753606953779926 0.005717186997723534 0.006498115351020919 1.2550726029694641e-06 5.901331150551874 0.042758999578953016 TATESFASDPILY(ph)RPVAVALDTK ddPTM_KYSE-520_SHP099_60min_R1 1 TATESFASDPILYRPVAVALDTK 23 1 P14618;P14618-3;H3BUW1;H3BTJ2;H3BT25;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 1 TATESFAS(0.002)DPILY(0.998)RPVAVALDTK 105.92 0.00013148 57829000.0 165560.0 194280.0 154990.0 150310.0 146340.0 190130.0 144490.0 167690.0 214030.0 169780.0 True False 156376.0567643225 184946.4971797745 164980.9033927682 164595.41720765043 157856.12543929828 188943.32814485746 159096.45928650748 167108.32252914042 175167.5472572324 168275.88128684132 0.9292838377578633 1.099067173295718 0.9804191909804558 0.9781283921911709 0.9380793268300783 1.1228188300068185 0.9454501623753989 0.9930616393224487 1.0409545676878293 1.0 17.36046888674715 TATESFASDPILYRPVAVALDTK ddPTM_KYSE-520_SHP099_60min_R1 2 TATESFASDPILYRPVAVALDTK 23 1 P14618;P14618-3;H3BUW1;H3BTJ2;H3BT25;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 209.71 1.0561e-20 3652100000.0 2856200.0 2939700.0 2290700.0 2410500.0 2830400.0 3098800.0 2194900.0 2643000.0 2757100.0 2163700.0 False True 2697760.892306457 2798472.399420344 2438362.1872495874 2639593.1952567487 3053136.377226943 3079459.2397585018 2416781.9121596995 2633832.0498808385 2256480.140835001 2144531.30133313 1.257972262111267 1.3049342752333328 1.1370140345975832 1.2308485278885264 1.4236846882715055 1.4359591011071657 1.126951101463209 1.2281620922219876 1.0522020076985024 1.0 21.032230942862817 -7.670735677841176 1.3702664654716883 0.9988084003429875 1.2852045248304622 0.5231226105530984 0.09495336425241974 0.356788126256699 1.2767444356780064 0.0952926939375976 0.030418574958659676 2.134343531179189e-08 7.670735677841176 0.28639612448747476 TATPPGYKPGS(ph)PPSFR ddPTM_KYSE-520_SHP099_60min_R1 1 TATPPGYKPGSPPSFR 16 1 P54259 P54259 ATN1 Atrophin-1 1 TATPPGYKPGS(0.975)PPS(0.025)FR 80.156 0.0055239 1628800000.0 1288100.0 1392900.0 1116000.0 922320.0 1086500.0 1317000.0 1118400.0 1183700.0 1385900.0 1292200.0 True False 1216646.5252363095 1325982.9932144766 1187939.1456631336 1009977.0154943811 1172001.3686606393 1308780.1144836547 1231458.7865321462 1179594.020977656 1134255.4956959225 1280752.113316389 0.9499469199281007 1.0353158737181127 0.9275324501218859 0.7885811820986491 0.9150883738351602 1.0218840171145138 0.9615122034375548 0.9210166500707201 0.8856167277826097 1.0 20.28855984165037 -9.1225944264588 22.683800213924574 0.9999999999999959 0.9350121748446623 0.08315299623853756 0.06562284037019502 0.0 0.0 0.0690526328617213 0.016747723471522 7.540594266847396e-10 9.1225944264588 -0.06498782515533363 TATPQQAQEVHEK ddPTM_KYSE-520_SHP099_60min_R1 5 TATPQQAQEVHEK 13 0 P60174;P60174-3;P60174-4;U3KPZ0 P60174 TPI1 Triosephosphate isomerase 0 ;;;; 218.6 4.0349e-11 6794630000.0 5161900.0 5261540.0 3808380.0 3234570.0 4751370.0 4893060.0 3531940.0 4719510.0 4826850.0 4408630.0 False True 4875559.117007459 5008767.720667451 4053874.268423448 3541982.560291069 5125275.787402755 4862520.597551556 3888982.96361261 4703139.121351914 3950415.714986548 4369572.968062239 1.115797619731616 1.1462831167432532 0.9277506745061194 0.8106015361638008 1.1729466071087595 1.1128136852484978 0.8900144229282079 1.0763383872354924 0.9040736346230251 1.0 22.059060863475203 -4.749046874272556 24.995503906320163 0.9909404096550228 1.131040449027424 0.23143880566838526 0.10491229050708922 351.36202784420385 708679.537962949 0.02757154369281623 0.07183197901689901 1.7821864021221405e-05 4.749046874272556 0.14010003937240112 TAVIPINGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 13 TAVIPINGSPR 11 0 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR;TAVIPINGS(1)PR 224.8 4.7555e-10 203145870000.0 77501910.0 73088640.0 66319930.0 61961710.0 66659550.0 67865990.0 64082000.0 65008190.0 80575470.0 66376090.0 True False 73202724.55607282 69577352.0261147 70595018.80343987 67850532.28893252 71905277.34404252 67442413.18279931 70560033.94005103 64782691.76191554 65944995.79030367 65788049.48241657 1.1127055009533 1.0575986455520454 1.0730675154354299 1.0313504173287156 1.092983876399329 1.0251468726219783 1.0725357339999857 0.9847182318306954 1.002385635523805 1.0 25.971322203821234 -7.26024396328721 24.997618282082637 0.9951639471233259 1.0644735787517245 0.6303202786596934 0.024806575201153775 68.89583446107957 1440742.0282602676 0.01190541584365693 0.006362492185124553 5.4923225803440414e-08 7.26024396328721 0.06930963162839865 TAWVFDDK ddPTM_KYSE-520_SHP099_60min_R1 2 TAWVFDDK 8 0 H0YJS4;G3V4T5;P05198 H0YJS4 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 0 ; 149.65 0.0032259999999999997 1402540000.0 1902410.0 1752010.0 1226970.0 1046890.0 1634610.0 1828120.0 1569210.0 1480490.0 1345220.0 1602830.0 False True 1796879.5249396844 1667840.8097793758 1306062.4494214111 1146386.1108410454 1763244.5073413416 1816710.024973317 1727841.06081376 1475354.5257389639 1100961.9582365754 1588630.1731828686 1.1310873702842883 1.0498609669724492 0.822131211825516 0.7216192479488326 1.1099150306383945 1.1435701371159805 1.0876295125076079 0.9286960241873327 0.6930259646464884 1.0 20.599351879401357 -7.5271891795132095 24.88477835118467 0.8346289431052845 1.0021736692267948 0.16390834311011815 0.14707880325304767 229.3818831923416 1324193.7743220099 0.10578497644720307 0.04034665197042233 2.9703718501826064e-08 7.5271891795132095 0.1675447261215104 TAWVFDDKYK ddPTM_KYSE-520_SHP099_60min_R1 4 TAWVFDDKYK 10 1 H0YJS4;G3V4T5;P05198 H0YJS4 EIF2S1 Eukaryotic translation initiation factor 2 subunit 1 0 ;;; 139.86 0.00027057 5647300000.0 6579470.0 5966460.0 4045480.0 3695260.0 5880000.0 5675260.0 4517610.0 4257820.0 4776590.0 4435710.0 False True 6214493.6832517255 5679822.305760961 4306258.113796861 4046456.39937957 6342722.547376479 5639838.597209197 4974294.106424787 4243050.616202654 3909281.6640350525 4396413.060330163 1.4135372627577965 1.291921898106275 0.9794935222655053 0.9203995038345393 1.4427039635125076 1.2828272775592324 1.1314437561176807 0.9651164615283007 0.8891979917240698 1.0 22.067895508863028 -7.182691343167955 3.185345035920743 0.9400306649090729 1.2099936898865808 0.3649911793136519 0.15865270585823446 0.3209618482667953 6.295524180298965 0.09584641613632368 0.04881129544199465 6.566117601508117e-08 7.182691343167955 0.2699630249775079 TCDSITPSKSS(ph)PVPVSDTQK ddPTM_KYSE-520_SHP099_60min_R1 5 TCDSITPSKSSPVPVSDTQK 20 1 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 TCDSIT(0.001)PS(0.002)KS(0.183)S(0.815)PVPVSDTQK;TCDSITPSKS(0.029)S(0.971)PVPVSDTQK;T(0.001)CDS(0.006)IT(0.005)PS(0.02)KS(0.138)S(0.829)PVPVSDTQK;TCDSITPS(0.001)KS(0.035)S(0.963)PVPVS(0.001)DTQK;TCDSITPSKS(0.032)S(0.968)PVPVSDTQK 171.52 4.9048e-10 9245900000.0 5512990.0 6130120.0 4398700.0 3687870.0 4052750.0 5829840.0 4525460.0 5521140.0 6219410.0 5544570.0 True False 5207173.454826901 5835619.833702283 4682247.240168839 4038364.0560014537 4371678.36800681 5793453.806090649 4982937.6610334115 5501988.453983765 5090121.92256741 5495449.42341018 0.9475427856081713 1.0619003804935414 0.8520226244322868 0.7348560135588442 0.7955087984949522 1.0542274816343489 0.9067388810470152 1.0011898991455965 0.9262430659235792 1.0 22.389806040382535 -6.26243933786439 24.999969976210238 0.9733204198964229 0.8791261590616435 0.23198040206563464 0.09017285532648922 169.58392795905297 4239740.403565201 0.03456198412301006 0.032233180196306804 5.464628743375261e-07 6.26243933786439 -0.09419426083477944 TCEERPAEDGS(ph)DEEDPDSMEAPTR ddPTM_KYSE-520_SHP099_60min_R1 4 TCEERPAEDGSDEEDPDSMEAPTR 24 1 Q9H6Y2;D6RGJ8 Q9H6Y2 WDR55 WD repeat-containing protein 55 1 TCEERPAEDGS(1)DEEDPDSMEAPTR;TCEERPAEDGS(1)DEEDPDSMEAPTR;T(0.011)CEERPAEDGS(0.989)DEEDPDSMEAPTR;TCEERPAEDGS(1)DEEDPDSMEAPTR 132.77 2.1350999999999998e-07 4260300000.0 3129524.0 3093752.0 2695717.0 2658364.0 2748533.0 2821937.0 2690056.0 2856136.0 3435870.0 2857419.0 True False 2955923.065168572 2945123.5101035777 2869487.2311197007 2911014.115293717 2964826.91008645 2804324.244438617 2961993.112896562 2846228.730843157 2812002.619234252 2832104.4906983436 1.043719634948814 1.0399063734323466 1.0131996331858997 1.0278625399785004 1.0468635319862014 0.9901909529288319 1.0458629343037376 1.0049871889230084 0.9929021434307549 1.0 21.433443064064065 -7.148124202910066 0.6220133280559869 0.9948830062364779 1.03374957050705 0.36902192628314134 0.017225905938567758 0.8566728937346916 0.6698602944989158 0.016118823977040342 0.009253970744894546 7.110101443690675e-08 7.148124202910066 0.038866564270572224 TCEESSFCKR ddPTM_KYSE-520_SHP099_60min_R1 1 TCEESSFCKR 10 1 Q14697;Q14697-2 Q14697 GANAB Neutral alpha-glucosidase AB 0 70.41199999999999 0.057112 640850000.0 872120.0 734280.0 642850.0 571810.0 758140.0 759120.0 519020.0 578830.0 783700.0 689730.0 False True 823741.7650718822 699004.0866232492 684289.1395963664 626154.650479055 817801.3047734706 754382.0504987345 571487.6067470621 576822.1738299369 641399.8354692941 683619.5288018202 1.2049710845967991 1.0225045616359052 1.0009795079957997 0.9159402622340472 1.1962813675127606 1.1035115568171958 0.8359732024459691 0.843776617734916 0.9382409490165903 1.0 19.382834085176896 -6.75771132949117 24.999974797653923 0.8914790675380067 1.0667395906032426 0.4426966464734996 0.09251090995819491 91.66363482913452 614694.069361217 0.037564084234435115 0.027950179238139427 1.7469829664191043e-07 6.75771132949117 0.17526052306523598 TCFS(ph)PNR ddPTM_KYSE-520_SHP099_60min_R1 10 TCFSPNR 7 0 O00303 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F 1 T(0.076)CFS(0.924)PNR;TCFS(1)PNR;TCFS(1)PNR;TCFS(1)PNR;TCFS(1)PNR;TCFS(1)PNR;TCFS(1)PNR;TCFS(1)PNR;TCFS(1)PNR;T(0.006)CFS(0.994)PNR 160.82 0.00047676 55741600000.0 28154100.0 23620430.0 20550240.0 19508930.0 20618420.0 21620260.0 20082020.0 19472770.0 22543920.0 21468000.0 True False 26592335.949193105 22485669.08781175 21874941.351946585 21363052.841626316 22240972.351237826 21485319.937711775 22112106.563228093 19405223.505848695 18450512.413975924 21277810.22185129 1.2497684522951547 1.0567661264654034 1.0280635612344202 1.0040061744552777 1.0452660362764874 1.009752399974288 1.0392096899388652 0.9119934477994573 0.867124587615136 1.0 24.342846349607417 -1.0000000000000002 0.5719194725119937 0.9697856494758115 14.588486266604562 0.7120866616672243 0.05118619765642251 90.1494523884139 0.770141868640162 0.026466032097141944 1520.1269326298127 0.09999999999999995 1.0000000000000002 13.61870061712875 TCFS(ph)PNRVIGLSSDLQQVGGASAR ddPTM_KYSE-520_SHP099_60min_R1 4 TCFSPNRVIGLSSDLQQVGGASAR 24 1 O00303 O00303 EIF3F Eukaryotic translation initiation factor 3 subunit F 1 T(0.011)CFS(0.989)PNRVIGLSSDLQQVGGASAR;T(0.204)CFS(0.796)PNRVIGLSSDLQQVGGASAR;T(0.203)CFS(0.797)PNRVIGLSSDLQQVGGASAR;T(0.353)CFS(0.647)PNRVIGLSSDLQQVGGASAR 159.05 2.4694999999999996e-10 4462060000.0 1656770.0 1854400.0 1616200.0 953262.0 1056850.0 1358420.0 865208.0 1021050.0 2060660.0 1304920.0 True False 1564865.6654108881 1765311.8404888534 1720382.8380114299 1043859.7338713292 1140018.0823460615 1349941.5968996848 952671.6682563529 1017508.2158648612 1686496.0890112976 1293359.4240123974 1.2099232714106611 1.3649043009346271 1.3301660822745427 0.807091760025188 0.8814394987043709 1.0437482202060677 0.7365869460330473 0.7867172859870915 1.3039655162362136 1.0 20.302691824505345 -5.252796681264323 24.61303082835602 0.921964150509543 1.3079885687146773 0.5283092642953587 0.15738119586180957 381.75668500205137 1087179.244532726 0.042471777035780624 0.07209183401603621 5.587317086217672e-06 5.252796681264323 0.38602441820513433 TCGVNDDES(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 TCGVNDDESPSK 12 0 Q8NG08 Q8NG08 HELB DNA helicase B 1 TCGVNDDES(0.986)PS(0.014)K 103.85 0.0013125 0.0 220260.0 187970.0 210830.0 172770.0 217550.0 212600.0 164530.0 236080.0 271570.0 188300.0 True False 208041.73872257557 178939.63905127766 224420.43913992727 189190.00885480532 234669.9473098222 211273.08454003438 181162.29805805962 235261.09358148635 222259.73372259314 186631.80849518313 1.1147174771547317 0.9587842527705881 1.2024769033180078 1.0137072044698545 1.257395238260679 1.132031491542275 0.970693578542563 1.260562684777061 1.1908995337647899 1.0 17.509835366561216 -4.764436965521388 24.99999617731145 1.1327746412539654 1.036750875562078 0.10766335888333012 0.10503884279599342 151.93365582036992 1267177.8559219802 0.026504567895445516 0.05932308681898509 1.7201369876747493e-05 4.764436965521388 -0.09602376569188742 TCGVNDDES(ph)PSKIFMVGESPQVSSR ddPTM_KYSE-520_SHP099_60min_R1 1 TCGVNDDESPSKIFMVGESPQVSSR 25 1 Q8NG08 Q8NG08 HELB DNA helicase B 1 TCGVNDDES(0.977)PS(0.023)KIFMVGESPQVSSR 164.55 2.3056999999999999e-10 854230000.0 389780.0 462230.0 256680.0 241250.0 311410.0 416430.0 273550.0 312540.0 444530.0 430750.0 True False 368158.1263928339 440023.77697862475 273226.0035025208 264178.3274655427 335916.19531947444 413830.90590313514 301203.1035907267 311455.8716873842 363814.5576893772 426933.89011842944 0.8623305268427123 1.0306602196807666 0.6399726276748121 0.618780409754449 0.7868107992698656 0.9693091026068238 0.7055029140628175 0.7295177986479073 0.8521566596375303 1.0 18.7036531630593 -8.020684396517895 19.06182719674084 1.00000001024511 0.7925424791117411 0.19941598560540885 0.12564574570842388 110.92484392768367 102226.23864608517 0.1290171582975056 0.033312746082770996 9.534888163324855e-09 8.020684396517895 -0.20745753113336896 TCLS(ph)PGSSEMSLQPDLVR ddPTM_KYSE-520_SHP099_60min_R1 1 TCLSPGSSEMSLQPDLVR 18 0 Q6UB98-2;Q6UB98 Q6UB98-2 ANKRD12 Ankyrin repeat domain-containing protein 12 1 TCLS(1)PGSSEMSLQPDLVR 243.01 1.1208e-23 60711000.0 74227.0 73759.0 69444.0 51124.0 79848.0 78028.0 66209.0 65536.0 85261.0 81940.0 True False 70109.48034214397 70215.50692548389 73920.47135432855 55982.809589008895 86131.58332702676 77540.99830898305 72902.05185757055 65308.670912217385 69779.75165490298 81214.07534835537 0.8632676052940339 0.8645731250932206 0.9101928580391758 0.6893239792348701 1.0605499472545674 0.9547729008350189 0.8976529197047228 0.8041545832059999 0.8592076109417413 1.0 16.309442164539927 -4.678936039690484 10.923874994606521 0.8904931843387881 0.8637430131534459 0.014742338199852156 0.09715199830831547 3.2729016303736227 411.83195315676807 0.025050151949090937 0.06634414941649247 2.094420886995779e-05 4.678936039690484 -0.026750171185342175 TCNS(ph)PQNSTDSVSDIVPDSPFPGALGSDTR ddPTM_KYSE-520_SHP099_60min_R1 2 TCNSPQNSTDSVSDIVPDSPFPGALGSDTR 30 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 T(0.14)CNS(0.623)PQNS(0.118)T(0.118)DS(0.001)VSDIVPDSPFPGALGSDTR;T(0.188)CNS(0.61)PQNS(0.188)T(0.013)DS(0.001)VSDIVPDSPFPGALGSDTR 144.12 1.0809e-06 388330000.0 137744.0 190693.0 149309.0 117211.0 129857.0 165313.0 123598.0 192832.0 199396.0 156118.0 True False 130103.06573414359 181531.82204397136 158933.6970428465 128350.69819922771 140076.00711473948 164281.22024725616 136092.4920402361 192163.11079932703 163190.7127641129 154734.91597796613 0.8408125917273251 1.1731794397963873 1.0271353174449538 0.8294876265516216 0.9052643757190908 1.0616945710601569 0.8795202503591066 1.241885902640685 1.0546469859934577 1.0 17.239439252506752 -7.2507172704168354 24.940043046159047 1.111199841457821 0.9672324583906886 0.22918195243200323 0.11578307109751051 978.5938105755068 2276252.9170684703 0.05507728533824848 0.03140087052278172 5.6141334218681295e-08 7.2507172704168354 -0.14396738306713242 TCNSPQNS(ph)TDSVSDIVPDSPFPGALGSDTR ddPTM_KYSE-520_SHP099_60min_R1 1 TCNSPQNSTDSVSDIVPDSPFPGALGSDTR 30 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 T(0.203)CNS(0.203)PQNS(0.262)T(0.262)DS(0.07)VS(0.001)DIVPDSPFPGALGSDTR 82.65 0.0049744 221190000.0 98079.0 161810.0 98218.0 83320.0 92842.0 128070.0 100030.0 104040.0 118820.0 128660.0 True False 92638.36235436084 154036.40471823848 104549.28943435631 91238.7077489286 100148.13720128026 127270.66762484571 110142.00859872182 103679.10952311844 97245.2832084489 127520.17249596531 0.7264604535983661 1.2079375498265745 0.8198647115040893 0.7154845069850839 0.7853513310174428 0.9980434086134294 0.8637222365912866 0.8130408506654021 0.7625874503230123 1.0 16.960365960406264 TCNVLVALEQQS(ph)PDIAQGVHLDR ddPTM_KYSE-520_SHP099_60min_R1 5 TCNVLVALEQQSPDIAQGVHLDR 23 0 P31153;P31153-2 P31153 MAT2A S-adenosylmethionine synthase isoform type-2 1 TCNVLVALEQQS(1)PDIAQGVHLDR;TCNVLVALEQQS(1)PDIAQGVHLDR;TCNVLVALEQQS(1)PDIAQGVHLDR;TCNVLVALEQQS(1)PDIAQGVHLDR;TCNVLVALEQQS(1)PDIAQGVHLDR 277.04 3.4208999999999995e-38 3274290000.0 1391980.0 1315940.0 1181500.0 1051140.0 1120750.0 1142730.0 930770.0 1194070.0 1469300.0 1261050.0 True False 1314764.0945566657 1252720.2671337908 1257661.3804668386 1151040.0295632365 1208946.6488047945 1135597.7981958296 1024861.3150398119 1189928.0498680335 1202512.1580388332 1249878.0780820549 1.051913876731224 1.0022739730391121 1.0062272492983695 0.9209218480969873 0.9672516623860866 0.9085668579277837 0.8199690297892636 0.9520352990701181 0.9621035676408495 1.0 20.253355940431383 -5.011068716295942 1.2009186997105978 0.9230246138951884 1.0460364390127064 0.4125243472855824 0.047165082984001676 0.569090805137946 1.4319816750342802 0.01642687924454574 0.06339284721954647 9.748353820701256e-06 5.011068716295942 0.12301182511751796 TCPSLSPT(ph)SPLNNK ddPTM_KYSE-520_SHP099_60min_R1 1 TCPSLSPTSPLNNK 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 TCPSLS(0.047)PT(0.628)S(0.325)PLNNK 272.74 2.3884e-24 675160000.0 1147200.0 1468100.0 989630.0 821790.0 858110.0 1242200.0 991340.0 1304700.0 1380500.0 1306700.0 True False 1083562.529113497 1397570.2723369745 1053423.133263986 899892.674519828 925638.3750219779 1234446.9690293076 1091554.3217460448 1300174.3002192704 1129835.999572999 1295123.6545972158 0.8366479333979004 1.0791018041992444 0.8133764907502993 0.6948314713622423 0.7147104230057878 0.953149890087693 0.842818612625463 1.0038997400781977 0.8723769313937662 1.0 20.30465841809126 -7.244329615264315 23.027971706053176 0.9536037465148017 0.8484261352131479 0.17883665095186818 0.10877880820252504 567.5821572254084 763909.1671822253 0.055664586705507266 0.03200032196554635 5.6973170047754445e-08 7.244329615264315 -0.10517761130165382 TCPSLSPTS(ph)PLNNK ddPTM_KYSE-520_SHP099_60min_R1 1 TCPSLSPTSPLNNK 14 0 O75925;O75925-2 O75925 PIAS1 E3 SUMO-protein ligase PIAS1 1 TCPS(0.003)LS(0.272)PT(0.264)S(0.46)PLNNK 74.29 0.017046000000000002 751910000.0 990020.0 1306200.0 895940.0 867000.0 974290.0 1298600.0 896990.0 1321400.0 1458300.0 1343200.0 True False 935101.6170440597 1243448.1913538289 953693.7259546858 949399.4193269444 1050961.0800482028 1290494.9557087868 987666.5029787826 1316816.3718170796 1193509.4807513973 1331300.2929937872 0.7023972141861637 0.9340103039845359 0.7163625899984207 0.7131369416226628 0.789424508939928 0.9693492613952345 0.7418810828605382 0.9891204702252888 0.8964990746508963 1.0 20.34440459688402 -7.178208250327129 0.6384562873967132 0.9928518926738118 0.7733045157874654 0.4004875768698013 0.091229369589959 0.7809654462033493 0.6381755850725266 0.08504072749729943 0.04700722979787586 6.63424872537909e-08 7.178208250327129 -0.2195473768863464 TCS(ph)FGGFDLTNR ddPTM_KYSE-520_SHP099_60min_R1 6 TCSFGGFDLTNR 12 0 O94885;A0A1B0GWB9 O94885 SASH1 SAM and SH3 domain-containing protein 1 1 T(0.235)CS(0.765)FGGFDLTNR;T(0.071)CS(0.929)FGGFDLTNR;T(0.001)CS(0.999)FGGFDLTNR;T(0.001)CS(0.999)FGGFDLTNR;T(0.111)CS(0.889)FGGFDLTNR;T(0.115)CS(0.885)FGGFDLTNR 210.86 1.2851e-10 3556282000.0 8061710.0 6904490.0 6456130.0 5956360.0 6455870.0 7259410.0 6278650.0 6962640.0 8053190.0 7106790.0 True False 7614510.875679536 6572787.936549225 6872302.469973241 6522450.663555061 6963910.240124389 7214101.329448594 6913357.215718942 6938488.226932394 6590933.700399335 7043829.369598958 1.081018644282275 0.9331270806923945 0.9756486293711168 0.9259807870568022 0.988654022509475 1.0241732090479827 0.9814770990275359 0.985044904250348 0.9357032026990443 1.0 22.747928530932963 -4.247852848361193 24.60386806921054 0.9728251711589624 1.081018734043846 0.541899525551216 0.030010283608282836 1509.0979205598583 2732770.8309092815 0.007672826656852157 0.14452948783091485 5.6512842437105525e-05 4.247852848361193 0.10819356288488358 TCS(ph)LPDLSK ddPTM_KYSE-520_SHP099_60min_R1 7 TCSLPDLSK 9 0 Q96PY6-4;Q96PY6-2;Q96PY6-6;Q96PY6;Q96PY6-3 Q96PY6-4 NEK1 Serine/threonine-protein kinase Nek1 1 TCS(1)LPDLSK;T(0.006)CS(0.994)LPDLSK;T(0.001)CS(0.999)LPDLSK;T(0.001)CS(0.999)LPDLSK;TCS(1)LPDLSK;TCS(1)LPDLSK;TCS(1)LPDLSK 216.26 6.3889e-09 7819380000.0 15955770.0 15641260.0 14332020.0 12756700.0 13592640.0 13862480.0 13752420.0 15239810.0 17981100.0 15346520.0 True False 15070671.631061066 14889830.391590089 15255884.941242777 13969092.932558289 14662303.436457735 13775959.120294131 15142648.824285071 15186946.656108389 14716185.506644033 15210561.772211887 0.990803091743371 0.9789139030217976 1.002979716969671 0.9183811315949137 0.9639554183491261 0.9056837825320413 0.9955351453191633 0.9984474527333606 0.9674978299308427 1.0 23.858570101364514 TCTTVAFTQVNSEDKGALAK ddPTM_KYSE-520_SHP099_60min_R1 2 TCTTVAFTQVNSEDKGALAK 20 1 P62424;Q5T8U2 P62424 RPL7A 60S ribosomal protein L7a 0 ; 277.07 7.2736e-36 1630340000.0 879870.0 620220.0 325300.0 667000.0 478160.0 502920.0 627850.0 705060.0 420390.0 515340.0 False True 831061.8571226395 590423.7002308003 346269.3584984024 730391.4794591385 515788.4716417581 499781.0897312981 691319.2052255082 702614.3114222409 344057.77316949936 510774.48852845345 1.6270621884756564 1.1559381165097282 0.6779300185802309 1.4299685983992736 1.0098164321553138 0.9784770010169704 1.3534724633902644 1.3755861484908536 0.6736001521155321 1.0 18.962326943501292 -4.279934638378719 4.772053021746266 1.084484891878522 1.650623859663231 0.3049675713106824 0.25216980338619516 0.20478321770049437 12.779922600893041 0.061668812409617 0.3690068582572761 5.248864500810481e-05 4.279934638378719 0.5661389677847091 TDAEAT(ph)DTEATET ddPTM_KYSE-520_SHP099_60min_R1 1 TDAEATDTEATET 13 0 Q9Y3D3 Q9Y3D3 MRPS16 28S ribosomal protein S16, mitochondrial 1 T(0.002)DAEAT(0.916)DT(0.082)EATET 128.36 0.040977 0.0 28012.0 42562.0 31770.0 31354.0 29202.0 42332.0 31425.0 31574.0 51370.0 45677.0 True False 26458.118519462427 40517.25763313553 33817.945033797274 34333.87473307615 31500.031263348334 42067.79028574189 34601.745678444844 31464.477163427004 42042.50293231799 45272.33731616824 0.5844213064301711 0.8949672147513684 0.746989155819878 0.7583852915147457 0.6957898162704014 0.9292162229653228 0.764302170590327 0.6950044779815246 0.9286576621548371 1.0 15.466342171388082 -13.99999999887996 0.1437020190542491 1.799510765373845 0.7010739176733481 0.37582808219154196 0.09881639317323171 155.10369871515547 1.3485872711096005 35.1780733483697 0.5495655733250843 1.0000000025789856e-14 13.99999999887996 -1.0984368477004969 TDALLLR ddPTM_KYSE-520_SHP099_60min_R1 2 TDALLLR 7 0 Q9Y3R5-2;Q9Y3R5 Q9Y3R5-2 DOPEY2 Protein dopey-2 0 ; 93.59299999999999 0.050358999999999994 1174720000.0 356800.0 382400.0 1783440.0 252640.0 568300.0 311980.0 477510.0 282530.0 1531510.0 434970.0 False True 337007.59273683396 364028.93000589835 1898403.396004892 276650.8296410142 613021.9768153151 310032.81709689484 525781.3708485019 281549.969372998 1253426.3902253148 431116.5042015389 0.7817088639670571 0.844386439531254 4.403457945830401 0.6417078143491466 1.4219404055307026 0.719139290830676 1.2195807066637119 0.6530716561047698 2.9073959776760514 1.0 18.717718267929662 TDALTSS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 7 TDALTSSPGR 10 0 P49736;C9J013;C9JZ21;F8WDM3 P49736 MCM2 DNA replication licensing factor MCM2 1 TDALT(0.033)S(0.22)S(0.747)PGR;TDALT(0.001)S(0.077)S(0.922)PGR;TDALTS(0.022)S(0.977)PGR;TDALT(0.008)S(0.304)S(0.688)PGR;TDALTS(0.002)S(0.998)PGR;TDALTS(0.005)S(0.994)PGR;TDALTS(0.008)S(0.992)PGR 157.74 9.0029e-05 17625100000.0 31330400.0 27146800.0 24991490.0 24566860.0 27240630.0 28180320.0 28856800.0 29341500.0 31710800.0 27744910.0 True False 29592440.25639603 25842626.979822453 26602481.433197834 26901686.98810422 29384312.603017032 28004436.16992107 31773926.959228233 29239721.18485758 25952918.08421546 27499111.682613317 1.076123498022165 0.9397622467987503 0.967394210410717 0.9782747638758518 1.0685549752356422 1.0183760294928819 1.1554528497485148 1.063296935636826 0.9437729619689693 1.0 24.712881679511092 -5.754623081909708 24.99999988386505 1.0492743549582166 0.9851300319943125 0.13578372636253133 0.060872871157826254 269.8968398408851 989890.3217822848 0.018285471443530564 0.023062272756129317 1.759449953458619e-06 5.754623081909708 -0.06414432296390415 TDATDGKDYNASAST(ph)ISPPSSMEEDKFSR ddPTM_KYSE-520_SHP099_60min_R1 2 TDATDGKDYNASASTISPPSSMEEDKFSR 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDYNAS(0.001)AS(0.156)T(0.687)IS(0.156)PPSSMEEDKFSR;TDATDGKDYNAS(0.001)AS(0.146)T(0.701)IS(0.146)PPS(0.006)SMEEDKFSR 178.33 9.8451e-11 9005100000.0 6023700.0 5804400.0 5899300.0 5543900.0 5244200.0 5280100.0 5172300.0 5290500.0 7048700.0 5787400.0 True False 5689553.35305175 5525547.91141797 6279578.317213735 6070790.589165692 5656888.704583627 5247144.93734635 5695166.56078346 5272148.490311977 5768833.763267074 5736128.138529061 0.9918804489103943 0.963288786089585 1.0947416385339035 1.0583429174792545 0.9861859024011005 0.9147537869842456 0.9928590197505411 0.9191127469589506 1.005701690050878 1.0 22.451645821877865 -5.972899610586988 8.52605853820691 0.9616783543000583 1.0268543210500738 0.29570053119001827 0.04388328333265247 0.2869903012042794 79.27394572015064 0.013995284103942183 0.01576585175543044 1.0643890288124443e-06 5.972899610586988 0.06517596675001547 TDATDGKDYNASASTIS(ph)PPSSMEEDKFSR ddPTM_KYSE-520_SHP099_60min_R1 3 TDATDGKDYNASASTISPPSSMEEDKFSR 29 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TDATDGKDYNAS(0.011)AS(0.175)T(0.067)IS(0.735)PPS(0.006)S(0.006)MEEDKFSR;TDATDGKDYNASAST(0.001)IS(0.998)PPSSMEEDKFSR;TDATDGKDYNASAS(0.005)T(0.003)IS(0.983)PPS(0.004)S(0.006)MEEDKFSR 241.09 3.4179e-31 6104110000.0 2379310.0 2169140.0 2289340.0 1822940.0 2490800.0 2161340.0 1875390.0 2046550.0 3192320.0 2288040.0 True False 2247324.931263107 2064931.258454482 2436914.519473511 1996191.6695131024 2686811.7892866256 2147850.2753516324 2064972.7232425974 2039450.995718359 2612675.15983838 2267769.7456681817 0.9909846162979606 0.9105559602772041 1.0745863966694256 0.8802444222241528 1.184781565420777 0.9471200854735735 0.910574244667934 0.8993201358356819 1.1520901382642683 1.0 21.112842735333544 -4.728553237349256 24.999422274998164 0.9988641114740622 0.9507703828520613 0.04227399030366508 0.10072996660053919 789.2457858544851 599958.8338723253 0.024949809425745498 0.06600059429190017 1.868300640336473e-05 4.728553237349256 -0.0480937286220009 TDCSSGDASRPSSDNADS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 TDCSSGDASRPSSDNADSPK 20 1 Q9NZN5;E9PMR6;Q9NZN5-2 Q9NZN5;Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 TDCS(0.001)S(0.001)GDASRPS(0.006)S(0.015)DNADS(0.976)PK;TDCS(0.001)S(0.003)GDAS(0.001)RPS(0.016)S(0.016)DNADS(0.964)PK;TDCSSGDASRPSSDNADS(1)PK;TDCSSGDASRPSSDNADS(1)PK;TDCSSGDASRPSSDNADS(1)PK;TDCSSGDASRPSSDNADS(1)PK;TDCSSGDASRPSSDNADS(1)PK;TDCSSGDASRPSSDNADS(1)PK;TDCSSGDASRPSSDNADS(1)PK 212.32 7.184899999999999e-19 10837440000.0 6711630.0 6197100.0 5655070.0 5393220.0 5939470.0 5800220.0 5782220.0 5842040.0 7311440.0 5568630.0 True False 6339322.504597291 5899382.013963258 6019604.8606319195 5905790.0072692875 6406872.498038469 5764018.675497639 6366743.226629036 5821775.326782382 5983866.802403481 5519296.270528585 1.1485744185263989 1.0688648923349557 1.0906471705052028 1.07002590870225 1.16081329647935 1.044339421725882 1.1535425740099454 1.0548039172799886 1.0841720591002817 1.0 22.39605289941805 -8.364103613880737 0.9836344666210799 1.0001836570585954 1.1010127108798438 0.3708809518786772 0.03944233533428854 1.273665032007628 2.1354211057829353 0.03537101356025213 0.011480407989463119 4.324106542899915e-09 8.364103613880737 0.1008290538212484 TDDCHPWVLPVVK ddPTM_KYSE-520_SHP099_60min_R1 1 TDDCHPWVLPVVK 13 0 P17174-2;P17174 P17174-2 GOT1 Aspartate aminotransferase, cytoplasmic 0 122.39 0.00014839 342930000.0 609650.0 537210.0 330680.0 304050.0 588960.0 479590.0 425380.0 418560.0 402040.0 417430.0 False True 575831.4991928552 511401.6252313502 351996.1619067073 332946.8205840341 635307.8012759956 476596.70091512275 468381.56170873035 417108.11305263836 329039.67060364306 413731.8949556254 1.391798665303809 1.236070101112703 0.8507832395770707 0.8047405207175147 1.5355543264174378 1.1519457569647606 1.1320895667445856 1.0081604008252134 0.79529684468473 1.0 18.658336654926487 -7.42059856795919 3.132881710716194 0.89700799261244 1.1500618009262489 0.1991442830621334 0.21116497678964805 0.47097995175856056 8.637579360308592 0.15275554982563644 0.06089500079745195 3.796657598284457e-08 7.42059856795919 0.25305380831380886 TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKES(ph)DVEI ddPTM_KYSE-520_SHP099_60min_R1 3 TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKESDVEI 39 3 O15379;O15379-2 O15379 HDAC3 Histone deacetylase 3 1 TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI;TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI;TDEADAEERGPEENYSRPEAPNEFYDGDHDNDKES(1)DVEI 220.81 1.2848e-22 7281800000.0 3017170.0 2406580.0 2044650.0 2611090.0 2244060.0 2352660.0 2435560.0 2653060.0 2809260.0 2339800.0 True False 2849801.565520718 2290964.2844497776 2176451.4105556677 2859247.2085471647 2420654.755045186 2337976.1762650823 2681770.173574962 2643857.154088857 2299169.1996815973 2319071.192336856 1.2288547134463181 0.9878801013181678 0.9385013352533285 1.2329277419318854 1.0438035550801557 1.0081519635924485 1.1563983815747483 1.1400500177938584 0.9914181191500189 1.0 21.145115678766825 -7.783236506177027 24.78933735827062 0.9957088899422544 1.0859122159712093 0.14034847436916875 0.09441515453764832 534.0207241581812 607309.7005082974 0.09033533049561034 0.02340600356438902 1.6472650868534524e-08 7.783236506177027 0.09020332602895498 TDEERPPVEHS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 6 TDEERPPVEHSPEK 14 1 Q15170-2 Q15170-2 1 TDEERPPVEHS(1)PEK;TDEERPPVEHS(1)PEK;TDEERPPVEHS(1)PEK;TDEERPPVEHS(1)PEK;TDEERPPVEHS(1)PEK;TDEERPPVEHS(1)PEK 193.77 2.8828000000000004e-09 6025060000.0 5087830.0 4114570.0 3592920.0 4289084.0 4399690.0 4227360.0 4286390.0 4463240.0 4755440.0 3981049.0 True False 4805597.927562351 3916899.8811045177 3824525.3720752555 4696717.253799872 4745920.572188244 4200975.478180429 4719700.132335054 4447758.0621680515 3891971.970886944 3945780.0030692513 1.217908226972686 0.9926807571779803 0.9692697943373232 1.1903140190650514 1.2027838775848116 1.0646755457508204 1.1961386921378798 1.1272189677854145 0.9863631443870534 1.0 21.911879090178136 -7.762501768651964 24.995238344925486 0.9931815073677351 1.1166277510105964 0.2700887796218574 0.08331487594623746 40.90282058322563 962115.051577409 0.07022294256565034 0.022078434751064642 1.727818943999876e-08 7.762501768651964 0.12344624364286128 TDEVPAGGS(ph)RS(ph)EAEDEDDEDYVPYVPLR ddPTM_KYSE-520_SHP099_60min_R1 5 TDEVPAGGSRSEAEDEDDEDYVPYVPLR 28 1 D6RGI7;A0A499FJW5;Q9UJV9;D6RD33 D6RGI7 DDX41 Probable ATP-dependent RNA helicase DDX41 2 TDEVPAGGS(1)RS(1)EAEDEDDEDYVPYVPLR;TDEVPAGGS(1)RS(1)EAEDEDDEDYVPYVPLR;T(0.002)DEVPAGGS(0.999)RS(0.999)EAEDEDDEDYVPYVPLR;TDEVPAGGS(1)RS(1)EAEDEDDEDYVPYVPLR;TDEVPAGGS(1)RS(1)EAEDEDDEDYVPYVPLR 194.26 1.2447e-15 2431830000.0 1093330.0 1015310.0 1014080.0 1014420.0 1056550.0 1020960.0 1047020.0 1071010.0 1296110.0 1056910.0 True False 1032680.8054006792 966532.9835886202 1079449.2193853674 1110830.1718035047 1139694.4740528287 1014587.8099341167 1152862.9995304786 1067294.9162856143 1060769.0962742204 1047546.5996635363 0.9858089422774778 0.9226634728221761 1.0304546067278324 1.060411223863735 1.0879654178810658 0.9685371612680469 1.1005362433525814 1.0188519695719702 1.01262234693419 1.0 19.99858299234965 -4.830873903596599 7.305999585149267 1.038742567881316 0.954584034607485 0.388418672500223 0.04031896952651121 0.18710030224620441 16.36306821442579 0.010144295879777351 0.021465802652232975 1.4761350634802327e-05 4.830873903596599 -0.08415853327383105 TDFKEEPEPGFKR ddPTM_KYSE-520_SHP099_60min_R1 1 TDFKEEPEPGFKR 13 2 P47897;A0A1B0GVU9;P47897-2;B4DDN1;H7C0R3;A0A0U1RRC8;A0A0U1RQX5 P47897 QARS Glutamine--tRNA ligase 0 80.967 0.0057933 502960000.0 409400.0 408920.0 307310.0 189540.0 389590.0 372410.0 248010.0 316680.0 357890.0 293730.0 False True 386689.7658813336 389274.8693985666 327119.69431338535 207553.8246127212 420248.5165361236 370085.6510515244 273081.2711443466 315581.51099366805 292906.19767271366 291127.7807184817 1.328247565131064 1.3371271832521967 1.1236292651497508 0.7129303294261159 1.4435191155546252 1.2712137953244467 0.9380117227919725 1.0839965537292127 1.0061087160759545 1.0 18.151292988897357 -4.80355864797659 5.18088766872706 1.0761803327612893 1.3346798442459575 0.2464098179033628 0.18319638214793688 0.2607780105542278 16.11342453029959 0.049773754293725644 0.11309531262006309 1.5719594976426007e-05 4.80355864797659 0.2584995114846682 TDGALLVNAMFFKPHWDEK ddPTM_KYSE-520_SHP099_60min_R1 4 TDGALLVNAMFFKPHWDEK 19 1 P50454;E9PR70;E9PPV6;E9PK86;E9PMI5 P50454 SERPINH1 Serpin H1 0 ;;; 238.64 4.5831e-26 1638489000.0 1622310.0 1598350.0 1140220.0 941934.0 2072900.0 1746930.0 1017063.0 919198.0 1117486.0 750261.0 False True 1532317.2303051923 1521562.8668277366 1213720.4056165048 1031455.1241572154 2236025.436812369 1736026.7618792194 1119877.6536183334 916009.5166804262 914578.7119296137 743614.2712342252 2.0606345111719078 2.0461722235404376 1.632190844861024 1.3870835513218995 3.006969504634562 2.3345796726007184 1.5059926859117418 1.2318342346497269 1.2299101124184015 1.0 19.504194932754015 -6.953656254833919 4.292195143033378 1.1991205586434874 2.06484826648021 0.5145664039197481 0.40698350243544545 0.19830840551059956 7.866791882653455 0.19974403896824966 0.12757212653898342 1.1126120140463643e-07 6.953656254833919 0.8657277078367225 TDGCHAYLSK ddPTM_KYSE-520_SHP099_60min_R1 2 TDGCHAYLSK 10 0 Q01518-2;Q01518 Q01518-2 CAP1 Adenylyl cyclase-associated protein 1 0 ; 115.18 0.001019 1925210000.0 7381500.0 8460400.0 4937500.0 7437500.0 7313200.0 7100000.0 5998500.0 6465600.0 6312300.0 6030300.0 False True 6972033.480344562 8053949.684680703 5255779.150279326 8144357.763834092 7888707.233583974 7055686.266388724 6604886.919718423 6443172.342682383 5166145.440133758 5976876.233502403 1.166501230402592 1.3475182302647668 0.8793521807962017 1.3626445396647542 1.3198712714452936 1.1804973017241394 1.1050733964835693 1.078016691489483 0.8643554322198901 1.0 22.510960237709067 -7.270810209181513 1.6245816084790792 0.9421709535520488 1.2113351313821281 0.3784336728921832 0.1354077104771623 0.43287003637255306 2.066311864967812 0.10652558921953521 0.04112242177718945 5.360308569177548e-08 7.270810209181513 0.2691641778300793 TDGFAEAIHS(ph)PQVAGVPR ddPTM_KYSE-520_SHP099_60min_R1 8 TDGFAEAIHSPQVAGVPR 18 0 P12270 P12270 TPR Nucleoprotein TPR 1 TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR;TDGFAEAIHS(1)PQVAGVPR 200.29 4.8809e-13 38348720000.0 4598860.0 3812410.0 3691080.0 4581230.0 4764110.0 12769090.0 14166150.0 19364900.0 18652210.0 16979050.0 True False 4343752.068199874 3629256.1010559252 3929012.922736812 5016628.721802975 5139018.352922078 12689393.372856567 15598202.690300755 19297727.681701634 15265438.847950367 16828628.826501016 0.2581168146842431 0.21565964395986473 0.2334719580094112 0.29810085976244244 0.30537356346165107 0.7540360836097261 0.9268849441695073 1.1467201446211936 0.9071112688581614 1.0 24.004414296863064 -6.408435194146233 1.8537937522359655 1.0200008817647814 0.24138458572332855 0.969706007078057 0.06179415149003956 0.05108346832034755 0.34813988387474465 0.02604207980784416 0.021451478078884232 3.904494414141207e-07 6.408435194146233 -0.7786162960414529 down TDGS(ph)IS(ph)GDRQPVTVADYISR ddPTM_KYSE-520_SHP099_60min_R1 11 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 2 T(0.005)DGS(0.996)IS(0.999)GDRQPVTVADYISR;T(0.014)DGS(0.986)IS(0.999)GDRQPVTVADYISR;T(0.013)DGS(0.987)IS(0.993)GDRQPVT(0.006)VADYISR;T(0.001)DGS(0.999)IS(1)GDRQPVTVADYISR;T(0.001)DGS(0.999)IS(0.901)GDRQPVT(0.098)VADYISR;T(0.031)DGS(0.969)IS(0.99)GDRQPVT(0.01)VADYISR;T(0.001)DGS(0.999)IS(0.73)GDRQPVT(0.271)VADYISR;T(0.006)DGS(0.994)IS(0.999)GDRQPVT(0.001)VADYISR;T(0.009)DGS(0.991)IS(0.905)GDRQPVT(0.088)VADYIS(0.006)R;T(0.105)DGS(0.896)IS(0.999)GDRQPVTVADYISR;T(0.116)DGS(0.729)IS(0.604)GDRQPVT(0.185)VADY(0.018)IS(0.349)R 227.06 9.3877e-19 14206160000.0 9060170.0 8094030.0 8085750.0 8342500.0 8237580.0 8030220.0 7979970.0 8651070.0 10364390.0 8171810.0 True False 8557584.309098888 7705180.649413288 8606970.382657422 9135368.691735908 8885830.680581218 7980100.418321145 8786663.244602047 8621061.457344921 8482478.041010069 8099414.1209719675 1.056568312384543 0.9513256803923775 1.0626657995386641 1.1279048774752145 1.0970954871381335 0.9852688477377788 1.0848517082057296 1.0644055642274473 1.047295262881574 1.0 22.94938612234139 -4.84790992686987 14.717507718121185 1.0631668934723162 1.0039583866614312 0.17621285428580324 0.04654258987741066 1.4687100208051633 245.36846231379158 0.012086435516759537 0.025164839737789185 1.4193518662270684e-05 4.84790992686987 -0.059208506810884964 TDGS(ph)ISGDRQPVT(ph)VADYISR ddPTM_KYSE-520_SHP099_60min_R1 2 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 2 T(0.029)DGS(0.572)IS(0.419)GDRQPVT(0.898)VADY(0.037)IS(0.044)R;T(0.002)DGS(0.971)IS(0.067)GDRQPVT(0.96)VADYISR 193.47 8.032600000000001e-13 3603000000.0 2387500.0 2066450.0 1959990.0 2287980.0 2174980.0 2121170.0 2078250.0 2279820.0 2695000.0 2200360.0 True False 2255060.615636748 1967174.640195313 2086334.0914948792 2505428.9312937274 2346138.552056616 2107930.9912219387 2288339.79176541 2271911.8365339874 2205655.9354213933 2180866.522254175 1.0340204650882918 0.9020151486217565 0.956653729242638 1.1488226838862563 1.0757827350348859 0.9665566277037216 1.0492800767101276 1.041747311607914 1.0113667722963602 1.0 21.056470043303385 -5.112744928350181 21.519020286142002 1.0430613409564882 0.9579471829295526 0.29549649104705844 0.0547050999331937 9.011926216316006 1699.775321599747 0.014985798477383365 0.02595620170104213 7.713563722986065e-06 5.112744928350181 -0.08511415802693556 TDGS(ph)ISGDRQPVTVADYISR ddPTM_KYSE-520_SHP099_60min_R1 11 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.081)DGS(0.898)IS(0.02)GDRQPVTVADYISR;T(0.165)DGS(0.636)IS(0.198)GDRQPVT(0.001)VADYISR;T(0.011)DGS(0.84)IS(0.149)GDRQPVTVADYISR;T(0.001)DGS(0.995)IS(0.004)GDRQPVTVADYISR;TDGS(0.997)IS(0.003)GDRQPVTVADYISR;T(0.001)DGS(0.893)IS(0.106)GDRQPVTVADYISR;T(0.026)DGS(0.648)IS(0.325)GDRQPVT(0.001)VADYISR;T(0.011)DGS(0.882)IS(0.104)GDRQPVT(0.003)VADYISR;T(0.001)DGS(0.497)IS(0.11)GDRQPVT(0.393)VADYISR;TDGS(0.997)IS(0.003)GDRQPVTVADYISR;T(0.002)DGS(0.997)IS(0.001)GDRQPVTVADYISR 252.39 5.1961e-27 12066040000.0 7591510.0 7028710.0 6332370.0 5727090.0 5951580.0 6908230.0 5997440.0 6590820.0 8076370.0 6958800.0 True False 7170393.807000001 6691040.221291199 6740564.7023502365 6271390.9116876 6419935.486141998 6865113.174092201 6603719.764573812 6567957.983728947 6609904.796719593 6897150.445864484 1.0396168480418393 0.9701166117527757 0.9772970381401299 0.9092727439993589 0.9308098375599995 0.9953549988471699 0.9574562446340992 0.9522712365462581 0.9583529964440427 1.0 22.717569005600538 -4.121857369610192 1.8483570466293806 0.9565948986929579 1.0891384600521672 0.4533476253792177 0.025893086081453104 1.1781441011750644 3.0756948487104245 0.007123758973650172 0.30338384195913004 7.553402547309206e-05 4.121857369610192 0.1325435613592093 TDGSIS(ph)GDRQPVTVADYIS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 TDGSISGDRQPVTVADYISR 20 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 2 T(0.004)DGS(0.039)IS(0.959)GDRQPVT(0.138)VADY(0.014)IS(0.846)R 114.9 0.00027324 1327400000.0 319610.0 311180.0 275830.0 295250.0 282730.0 295310.0 288970.0 330910.0 369320.0 309920.0 True False 301880.5961732608 296230.44570929726 293610.4431436044 323310.47122985095 304979.2424863527 293466.8607503175 318181.90767542424 329762.15044497425 302260.7977995656 307174.34991411114 0.982766289755865 0.9643723370526416 0.9558429706962859 1.0525308227078582 0.9928538713327717 0.9553755410644594 1.0358348858372808 1.0735341363534385 0.9840040286048642 1.0 18.22869822566288 -5.256289009642381 0.6773740592052633 1.019253550695594 0.960731103512213 0.1613837733856308 0.035778586619472384 2.0481265268822626 1.5812316509542301 0.02064659594819124 0.07750844604121798 5.542567493567103e-06 5.256289009642381 -0.058522447183380955 TDKLDEALEDYK ddPTM_KYSE-520_SHP099_60min_R1 4 TDKLDEALEDYK 12 1 Q99614;H0YB37 Q99614 TTC1 Tetratricopeptide repeat protein 1 0 ;;; 118.51 0.0010573 329900000.0 1322300.0 1197560.0 831340.0 793330.0 1185080.0 1142940.0 932860.0 1077310.0 1129530.0 1001370.0 False True 1248949.3830603005 1140027.4200257922 884929.5065910309 868727.8446766384 1278339.0538171653 1135806.4875079328 1027162.5926362452 1073573.063056045 924435.8251341472 992498.640854071 1.258389010976929 1.1486438097736524 0.8916178523222217 0.8752937373587488 1.2880008104767995 1.144390975216391 1.0349259438303562 1.0816871871302587 0.9314227617870046 1.0 19.920705601040584 -6.743178807436977 0.015451706895101253 1.172100141210047e-06 2.117720865996447 0.08941385599281149 0.13143911575223122 2241.8991792157713 20.59120475976751 1374.4815735711895 1443.0619478353894 1.8064302306230554e-07 6.743178807436977 2.1177196938963054 TDLADKR ddPTM_KYSE-520_SHP099_60min_R1 2 TDLADKR 7 1 P20340-4;P20340-2;P20340;C9JU14;J3KR73;Q53S08;Q9NRW1-2;Q9NRW1;Q9H0N0 P20340-4 RAB6A;RAB6B;RAB6C Ras-related protein Rab-6A;Ras-related protein Rab-6B;Ras-related protein Rab-6C 0 ; 100.45 0.01248 606510000.0 1257310.0 1208160.0 803120.0 980950.0 1235950.0 1172520.0 986000.0 1216300.0 1233140.0 1089490.0 False True 1187564.5079146547 1150118.1801148683 854890.4002374341 1074179.1930666273 1333212.2334064562 1165201.8677557898 1085674.502432667 1212080.939186553 1009232.8609296979 1079837.9662103928 1.0997617652603193 1.065084036775553 0.7916839627686044 0.994759609014652 1.2346410064514222 1.0790525099288506 1.0054050111265833 1.1224655708673188 0.9346150927361093 1.0 20.04238341608094 -4.529940772078882 24.99382418350562 1.026032022798562 1.091092469231497 0.050472971127288324 0.11002755928897508 557.6925686280545 1973782.59411294 0.029870971415728066 0.07940439821167239 2.9516117321415305e-05 4.529940772078882 0.06506044643293496 TDLEKDIISDTSGDFR ddPTM_KYSE-520_SHP099_60min_R1 12 TDLEKDIISDTSGDFR 16 1 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;;;;;;;;;; 208.85 1.0845e-17 9371120000.0 11233647.0 12685458.0 7824250.0 5228376.0 10343335.0 11104162.0 7291285.0 8391518.0 10633062.0 9745686.0 False True 10610494.207189893 12076029.556419348 8328613.674242625 5725279.2830714295 11157296.61897422 11034856.80607825 8028359.2438841555 8362409.7826530235 8702365.978480024 9659346.804068984 1.0984691224379934 1.2501911155454466 0.8622336316503524 0.5927190936616609 1.155077754768493 1.1424019687780371 0.8311492906023648 0.8657324301815493 0.9009269627646216 1.0 23.203494202029894 -4.764463321017229 24.999601548728602 0.9156358409150482 1.1743301508727728 0.2993715501791331 0.15631831999216939 92.12557288115423 761650.4892202805 0.04322016881415536 0.0965906662176932 1.7200326030013433e-05 4.764463321017229 0.2586943099577246 TDLEKDIISDTSGDFRK ddPTM_KYSE-520_SHP099_60min_R1 4 TDLEKDIISDTSGDFRK 17 2 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33;H0YKS4;H0YNA0;H0YN52 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;; 271.48 5.8936999999999995e-30 14451400000.0 7488400.0 8828900.0 5657910.0 3302740.0 6838150.0 6904010.0 4139080.0 4797660.0 7317640.0 5596910.0 False True 7073003.524244698 8404746.391550925 6022627.931576075 3616631.4165950124 7376273.501248731 6860919.51267753 4557498.599927994 4781018.037242259 5988941.038692774 5547325.731730085 1.2750294225175756 1.515098769750749 1.0856813215649685 0.6519594470373866 1.3296990041629013 1.2367976651224635 0.8215667909781483 0.8618599787453203 1.0796086850347906 1.0 22.403361010445362 -4.879485373157294 5.775550874356265 0.9984259628116443 1.390532263978792 0.39584731235765147 0.1932234812993904 0.20173257335340827 9.29842671969549 0.05267720149843079 0.11301163977972968 1.3198197618942049e-05 4.879485373157294 0.39210630116714773 TDLFYER ddPTM_KYSE-520_SHP099_60min_R1 2 TDLFYER 7 0 Q7RTV0 Q7RTV0 PHF5A PHD finger-like domain-containing protein 5A 0 ; 101.33 0.037017 539370000.0 554490.0 528730.0 415620.0 382510.0 569200.0 543060.0 425690.0 446840.0 496150.0 448340.0 False True 523731.3343515886 503329.0171600902 442411.5302155122 418863.6353941747 613992.8016950166 539670.5611021217 468722.899534039 445290.0163332395 406061.66692368215 444368.0564032416 1.178598071586696 1.1326849666784882 0.9955970593305791 0.942605188105774 1.3817212845242168 1.2144674967644342 1.0548078170333122 1.00207476643902 0.9137958074898203 1.0 18.761395586112044 -7.137656260912634 2.9140024957943296 0.9647954830109599 1.1353953634979381 0.30142604782534066 0.11469756148199645 0.38888233254423143 6.29049264213253 0.06938185389289157 0.03575750544109892 7.283560619019724e-08 7.137656260912634 0.17059988048697827 TDLHAFENLEIIR ddPTM_KYSE-520_SHP099_60min_R1 2 TDLHAFENLEIIR 13 0 P00533;E9PFD7;Q504U8;P00533-3;P00533-4;A0A1W2PRR9 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 0 ; 192.18 3.6806e-08 1318360000.0 654770.0 545980.0 296300.0 524150.0 755760.0 554080.0 379900.0 612350.0 550390.0 392530.0 False True 618448.602848365 519750.3012673118 315399.97209676186 573965.0584085565 815234.012313819 550621.7811944601 418303.99946670426 610225.900773565 450453.0502028134 389052.48958371877 1.5896276708320185 1.335938761948132 0.8106874535984485 1.4752895143344074 2.0954345085572106 1.4152891857435959 1.0751865382336565 1.5684924710968924 1.157820762655426 1.0 18.56960528608408 -7.961321123529107 5.561093769799876 1.0008193946333754 1.4092732196602462 0.16397891027557487 0.31762659058588283 0.3135036643719207 23.274182634612373 0.32639934111041957 0.08487168608001906 1.0931477783223236e-08 7.961321123529107 0.4084538250268708 TDLKGDDLEEGVT(ph)SEEFDKFLEER ddPTM_KYSE-520_SHP099_60min_R1 1 TDLKGDDLEEGVTSEEFDKFLEER 24 2 Q6ZVM7-2;Q6ZVM7;Q6ZVM7-5;Q6ZVM7-4;Q6ZVM7-3;F5H3S6 Q6ZVM7-2 TOM1L2 TOM1-like protein 2 1 TDLKGDDLEEGVT(0.5)S(0.5)EEFDKFLEER 149.57 5.0549e-07 401040000.0 196170.0 169380.0 157060.0 143120.0 156900.0 160910.0 144190.0 137180.0 217490.0 168300.0 True False 185288.05904480006 161242.73055543657 167184.33890488534 156722.08176940307 169247.13736111738 159905.70100346624 158766.13235878927 136704.15459805256 177999.29847673417 166808.9929354188 1.1107797954066874 0.9666309214987154 1.0022501542804223 0.9395301716741319 1.0146163847811402 0.9586155889411477 0.951784010951116 0.8195250879008572 1.0670845458892482 1.0 17.34783754327694 TDLKGDDLEEGVTS(ph)EEFDKFLEER ddPTM_KYSE-520_SHP099_60min_R1 1 TDLKGDDLEEGVTSEEFDKFLEER 24 2 Q6ZVM7-2;Q6ZVM7;Q6ZVM7-5;Q6ZVM7-4;Q6ZVM7-3;F5H3S6 Q6ZVM7-2 TOM1L2 TOM1-like protein 2 1 TDLKGDDLEEGVT(0.269)S(0.731)EEFDKFLEER 66.925 0.014581 255290000.0 92283.0 88630.0 65211.0 65623.0 64348.0 62712.0 55940.0 72579.0 102630.0 54317.0 True False 87163.87802840024 84372.08176365776 69414.60540128908 71859.79018972554 69411.82150996293 62320.59114616474 61594.96112178848 72327.24038906593 83994.97909176162 53835.79363798654 1.6190692499961103 1.5672116274724108 1.289376467040882 1.334795780534779 1.2893247562526122 1.1576051347033793 1.1441265552055886 1.3434786691438654 1.5602069444090958 1.0 15.716278071542881 -4.741503792522106 3.6975613102415967 1.2697840543168217 1.6105430936483545 0.4701469397862552 0.13992189985706827 0.19296597240399707 5.556439676284434 0.03731623124048833 0.10349107716632469 1.8134108400013317e-05 4.741503792522106 0.34075903933153273 TDLKGDDLEEGVTSEEFDKFLEER ddPTM_KYSE-520_SHP099_60min_R1 3 TDLKGDDLEEGVTSEEFDKFLEER 24 2 Q6ZVM7-2;Q6ZVM7;Q6ZVM7-5;Q6ZVM7-4;Q6ZVM7-3;F5H3S6 Q6ZVM7-2 TOM1L2 TOM1-like protein 2 0 ;; 157.55 5.0342e-08 242853000.0 274101.0 222038.0 136609.0 119630.0 209086.0 188618.0 140474.0 156484.0 194688.0 128472.0 False True 258896.07112320326 211370.96119416726 145415.03472212824 130999.59923192913 225539.87866339445 187440.7650977053 154674.4828141242 155941.19352764013 159337.56688509113 127333.83802970358 2.033207159457565 1.6599747911851999 1.1419983640814062 1.028788586435056 1.7712485711047368 1.4720420588750367 1.2147162545908872 1.2246642050580712 1.2513371885321005 1.0 16.958256330208414 -4.512208847985727 3.40814288935665 1.2878551834336567 2.0004065441348415 0.5681743666161945 0.21384738261775393 0.18608631898761901 4.310151068517676 0.05823454677049039 0.2479195745173887 3.074617905372929e-05 4.512208847985727 0.7125513607011849 TDLQGSAS(ph)PSKVEGVHTPR ddPTM_KYSE-520_SHP099_60min_R1 4 TDLQGSASPSKVEGVHTPR 19 1 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 TDLQGSAS(0.999)PS(0.001)KVEGVHTPR;TDLQGS(0.098)AS(0.858)PS(0.043)KVEGVHTPR;TDLQGSAS(0.994)PS(0.006)KVEGVHTPR;TDLQGSAS(1)PSKVEGVHTPR 261.65 2.7464999999999996e-35 11469100000.0 6592670.0 6913470.0 5720310.0 7456270.0 5967830.0 5618110.0 4958010.0 5233870.0 6927630.0 4897480.0 True False 6226961.45293818 6581336.523869967 6089050.335419614 8164911.658990682 6437464.268692148 5583045.291557905 5459214.036314596 5215714.926564442 5669747.023340749 4854092.137381778 1.2828272057268584 1.3558326330863257 1.254415895513667 1.682067712747354 1.3261932584914666 1.1501729125746083 1.1246622193824305 1.074498542456122 1.1680344877835225 1.0 22.210770062420185 -6.252234865222207 3.569610922866483 1.1045648678549884 1.3930022996414833 0.5923685459096562 0.11595021503186852 0.17724790708756255 4.922079003059685 0.04222593159388138 0.03968636828553125 5.594549680132428e-07 6.252234865222207 0.28843743178649484 TDNSSLSS(ph)PLNPK ddPTM_KYSE-520_SHP099_60min_R1 2 TDNSSLSSPLNPK 13 0 Q9UIG0-2;Q9UIG0 Q9UIG0-2 BAZ1B Tyrosine-protein kinase BAZ1B 1 TDNSSLS(0.298)S(0.702)PLNPK;TDNSSLS(0.431)S(0.569)PLNPK 212.35 3.4699e-11 1012600000.0 2001510.0 2048620.0 1656470.0 1217180.0 1311710.0 1776420.0 1501230.0 1942560.0 1972190.0 2111000.0 True False 1890482.250388735 1950201.2201586887 1763248.7066457088 1332860.4212414904 1414934.1143910226 1765332.7038504584 1652988.9789928969 1935821.7127569148 1614090.0108640883 2092298.1823331486 0.9035434176407083 0.932085702040803 0.8427329916615841 0.6370317732414223 0.6762583489955583 0.8437290242645593 0.7900350881869178 0.925213112118778 0.7714435850936867 1.0 20.996657040181507 -9.917595112705875 10.58821783522817 0.9999997443624492 0.8121560269455189 0.26054704749690427 0.09419767170484562 0.0 0.0 0.10038674111828626 0.024347361002484108 1.2089403898393444e-10 9.917595112705875 -0.1878437174169303 TDPANSQKAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 TDPANSQKASPK 12 1 Q8IX33;Q8WUU4 Q8IX33 ZNF296 Zinc finger protein 296 1 TDPANS(0.001)QKAS(0.999)PK;TDPANS(0.001)QKAS(0.999)PK 79.346 0.0073262 457230000.0 902990.0 1044190.0 970890.0 702620.0 788640.0 777440.0 660130.0 643510.0 1085580.0 797160.0 True False 852899.3446340631 994025.5450388563 1033475.1228789248 769396.7935495935 850701.4812522097 772587.7085832753 726862.3826479489 641277.8140063639 888466.0372448078 790097.7825810952 1.0794858097788953 1.2581044611865242 1.3080344555616437 0.9737994593987144 1.0767040485459078 0.977838092469241 0.9199650963117899 0.8116436068348837 1.1245013678463478 1.0 19.591671686859495 -5.2745645707478666 24.39891040400194 0.9766460595547892 1.2194978596536896 0.5503769650491407 0.09581171503082764 392.693729526585 729992.4338027128 0.02745069431658279 0.04100981530031694 5.314169827462301e-06 5.2745645707478666 0.2428518000989004 TDPVDIYK ddPTM_KYSE-520_SHP099_60min_R1 1 TDPVDIYK 8 0 P46940;A0A0J9YXZ5;H0YLE8 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 0 106.04 0.012754999999999999 361980000.0 282310.0 351430.0 262910.0 162850.0 312130.0 372110.0 244710.0 308820.0 266310.0 339600.0 False True 266649.7015289672 334546.77529281535 279857.59927087306 178327.2150373621 336692.85522323515 369787.5234628043 269447.6749394504 307748.7754991299 217954.81712878364 336591.40820480173 0.7922059061196299 0.99392547503547 0.8314460572938673 0.5298032293470114 1.0003013951513928 1.0986243690385709 0.8005185764441819 0.9143096585278186 0.647535295957903 1.0 18.360638825500025 -3.9724976839579482 16.959923104725625 0.8650156043395797 0.5790923075330769 0.018303678454046124 0.165860045752018 29858365.098541427 480347571.297752 0.04200044001633398 242014154.71896806 0.00010653745451711767 3.9724976839579482 -0.28592329680650275 TDQDEEHCR ddPTM_KYSE-520_SHP099_60min_R1 1 TDQDEEHCR 9 0 Q16186;A0A087WX59;A0A087WUX6 Q16186 ADRM1 Proteasomal ubiquitin receptor ADRM1 0 95.523 0.0076336 120450000.0 194900.0 197960.0 164710.0 167780.0 154260.0 176020.0 163690.0 175310.0 188110.0 169030.0 False True 184088.50847648236 188449.70445598205 175327.4701453181 183725.76075510352 166399.38438066284 174921.39388869618 180237.38266044992 174701.8905276617 153953.96586720538 167532.52570335014 1.0988224985185737 1.1248544344736375 1.0465279467926751 1.0966572609334784 0.9932362905774265 1.0441040816063951 1.0758351663580616 1.042793868200891 0.9189497097406129 1.0 17.354081690099882 -5.027731879203186 0.27830408696106484 0.9797104179873782 1.1783749845479219 0.46789435928115186 0.04221228492222742 5.3345745401722695 0.4841103054276271 0.05777376885524234 0.3531247066167868 9.381410091838506e-06 5.027731879203186 0.19866456656054365 TDS(ph)IGEK ddPTM_KYSE-520_SHP099_60min_R1 3 TDSIGEK 7 0 A0A286YFF8;Q7Z3U7-2;Q7Z3U7-6;Q7Z3U7-5;Q7Z3U7;Q7Z3U7-3 A0A286YFF8 MON2 Protein MON2 homolog 1 T(0.004)DS(0.996)IGEK;TDS(1)IGEK;TDS(1)IGEK 111.31 0.0029502 1497230000.0 6075300.0 3924850.0 3697030.0 4814260.0 4905520.0 5669000.0 6241100.0 4215360.0 5481240.0 5430330.0 True False 5738290.998189707 3736294.3146800417 3935346.4692571433 5271805.822939952 5291556.515409239 5633617.668191227 6872011.295266258 4200737.900032419 4485984.986816017 5382221.500932816 1.0661566041448087 0.694191852571004 0.7311751232414145 0.9794851107532963 0.9831547279301188 1.0467086252795132 1.2767983060666008 0.7804840249150597 0.8334820456643286 1.0 22.359770334461118 -5.3382029430374915 7.72806133427042 0.9917226391125169 0.8172106729204657 0.17277221261281717 0.1545036045840922 0.48610310487538344 43.94335773448843 0.04560186637998264 0.06783816585297182 4.589834826666272e-06 5.3382029430374915 -0.17451196619205123 TDS(ph)LKGR ddPTM_KYSE-520_SHP099_60min_R1 1 TDSLKGR 7 1 H7BZ00;E9PBQ4;C9J8W4;F8W6I3;F5GXF0;Q92570-2;P43354-2;P43354;P22736;P22736-2;Q92570;Q92570-3 H7BZ00 NR4A2;NR4A1;NR4A3 Nuclear receptor subfamily 4 group A member 3;Nuclear receptor subfamily 4 group A member 2;Nuclear receptor subfamily 4 group A member 1 1 T(0.032)DS(0.968)LKGR 58.596000000000004 0.042996 557130000.0 2007300.0 1576800.0 1472000.0 1697600.0 1703400.0 1718900.0 1751400.0 1553500.0 2051400.0 1785700.0 True False 1895951.0675466536 1501048.1611749462 1566887.4752832747 1858939.3935979484 1837447.8889797821 1708171.70750642 1928448.6040168118 1548111.2710896253 1678917.4715856938 1769880.0872535787 1.071231368272359 0.848107265562949 0.8853071383580009 1.0503194012892523 1.0381764856347144 0.9651341465494903 1.0895928023063375 0.8746983946759442 0.9486052098540547 1.0 20.755220187607065 -3.929195548211342 19.70840581738761 0.9683055344311894 3.6297985504696464 0.1451454659795226 0.07603958141283278 13538373.70548941 52266192.359245434 0.019758752471144156 1550116291.5018606 0.00011770758564786349 3.929195548211342 2.661493016038457 TDS(ph)PDMHEDT ddPTM_KYSE-520_SHP099_60min_R1 3 TDSPDMHEDT 10 0 Q9BW61 Q9BW61 DDA1 DET1- and DDB1-associated protein 1 1 TDS(1)PDMHEDT;TDS(1)PDMHEDT;TDS(1)PDMHEDT 167.67 1.5394000000000002e-05 2583400000.0 3177030.0 2922780.0 2823200.0 2528460.0 2815580.0 2720300.0 2637980.0 3012130.0 3560820.0 2585820.0 True False 3000793.812647708 2782365.2616177807 3005187.9892797126 2768764.078190784 3037150.1275412044 2703321.598655949 2904652.76260378 3001681.6240664283 2914264.848967425 2562911.646537521 1.1708533989853938 1.0856266798649654 1.1725679241965694 1.0803197534848181 1.1850389503845664 1.0547853268013048 1.1333409665245189 1.1711998063303053 1.1370914221348911 1.0 21.289352313541148 TDS(ph)PSCEYSR ddPTM_KYSE-520_SHP099_60min_R1 3 TDSPSCEYSR 10 0 Q9HAV4 Q9HAV4 XPO5 Exportin-5 1 T(0.001)DS(0.999)PSCEYSR;T(0.001)DS(0.985)PS(0.013)CEYSR;T(0.001)DS(0.852)PS(0.146)CEY(0.001)SR 199.12 0.0016555 553770000.0 1708610.0 1659430.0 1485890.0 1445840.0 1456990.0 1484320.0 1361720.0 1557230.0 1653430.0 1322250.0 True False 1613829.997270409 1579708.4919447883 1581672.8469080578 1583252.1988923545 1571646.823860895 1475055.8082994511 1499375.9467065022 1551828.3325902142 1353208.791578402 1310535.8936949335 1.231427544285236 1.2053912445625183 1.206890139001595 1.2080952582141973 1.1992398158815654 1.125536366761134 1.1440937664661377 1.184117382863112 1.0325614110142045 1.0 20.32172543687569 -7.725174858773493 0.3980986026895643 0.9851006944944247 1.227361425136393 0.8219476407686379 0.031769150070596455 0.4717442045664377 0.2165892857799925 0.0434591271037907 0.02830928208133136 1.8828908337787074e-08 7.725174858773493 0.24226073064196818 TDS(ph)PWIKPAR ddPTM_KYSE-520_SHP099_60min_R1 2 TDSPWIKPAR 10 1 A0A0C4DGF8;A0A1B0GV09;Q9H9B1-3;Q9H9B1;A0A0D9SER9;A0A1W2PPZ7;A0A0D9SEQ1;A0A1B0GVZ8;A0A1B0GUD1;A0A1B0GU48;Q9H9B1-4 A0A0C4DGF8 EHMT1 Histone-lysine N-methyltransferase EHMT1 1 TDS(1)PWIKPAR;TDS(1)PWIKPAR 215.85 2.7508e-09 2331500000.0 2580600.0 2277540.0 2111710.0 1837430.0 2260780.0 2079620.0 1830230.0 1847610.0 2404600.0 2057350.0 True False 2437448.9737014365 2168123.5597427622 2247834.2054554652 2012058.7947565273 2438690.523921396 2066640.320184129 2015247.5097234724 1841201.0721454176 1967985.255033128 2039123.4795940793 1.1953415269322731 1.0632625152128417 1.1023531571040186 0.9867272947870035 1.195950391590242 1.01349444546415 0.9882910622581033 0.9029375074980445 0.9651133316482077 1.0 20.95951771005591 -6.566698324543942 3.273565261218378 0.9559262112240978 1.0997955548340943 0.5399694740034928 0.06255814446681889 0.19171449725686182 4.240783226913707 0.024616760266046995 0.019046368461548592 2.712074875546805e-07 6.566698324543942 0.14386934360999648 TDS(ph)RDKPLKDVIIADCGK ddPTM_KYSE-520_SHP099_60min_R1 1 TDSRDKPLKDVIIADCGK 18 3 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 1 T(0.173)DS(0.827)RDKPLKDVIIADCGK 85.22399999999999 0.0021823 393070000.0 335850.0 318980.0 283930.0 198860.0 235570.0 208020.0 181320.0 183520.0 381410.0 198270.0 True False 317219.7309996233 303655.7220012584 302232.5821040623 217759.59461056077 254108.01879004738 206721.67001889908 199649.5951126688 182883.41195389003 312155.558563664 196513.48205172594 1.61423902160629 1.545215721745395 1.5379737763972305 1.1081152923301336 1.2930818595090667 1.0519465018918457 1.015958767959327 0.9306405344023764 1.5884689198143613 1.0 17.584268768202822 -5.239958987807287 6.13324660923269 1.1352212696942992 1.567035015877554 0.545193090346308 0.17770556808511603 0.13158382841219896 19.136313532968547 0.04810479835554915 0.08110421187839816 5.754942810346887e-06 5.239958987807287 0.43181374618325474 TDS(ph)SPNQAR ddPTM_KYSE-520_SHP099_60min_R1 1 TDSSPNQAR 9 0 P26599;P26599-2;P26599-3;A6NLN1;K7ES59;A0A087WU68 P26599 PTBP1 Polypyrimidine tract-binding protein 1 1 TDS(0.5)S(0.5)PNQAR 117.25 0.0015407 744730000.0 1562600.0 1277900.0 1437600.0 1397800.0 1500900.0 1751300.0 2543500.0 1271200.0 2083300.0 1958300.0 True False 1475919.4630341271 1216507.7658329937 1530269.996241328 1530646.4917361063 1619012.2910471726 1740369.4870882516 2800621.802167838 1266790.5039003098 1705025.2357192535 1940950.9855343434 0.7604104761191622 0.6267586223966852 0.7884124883349618 0.7886064630914519 0.8341335268708286 0.8966581330796091 1.4429121719407187 0.6526648603398724 0.8784483732080748 1.0 20.88833225573259 -6.019268046614593 2.0281598326592514 0.9803807102193364 0.7310795375314645 0.2596216573828072 0.18827849827367368 0.4841633720230157 3.9957761371463962 0.07177245603343613 0.07768787865017157 9.56603473258344e-07 6.019268046614593 -0.24930117268787189 TDS(ph)TSDGRPAWMR ddPTM_KYSE-520_SHP099_60min_R1 15 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y706;A0A2R8Y5T0;A0A2R8Y542;A0A2R8Y6I5 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 T(0.001)DS(0.498)T(0.498)S(0.004)DGRPAWMR;T(0.005)DS(0.332)T(0.332)S(0.332)DGRPAWMR;TDS(0.478)T(0.478)S(0.044)DGRPAWMR;TDS(0.987)T(0.012)S(0.001)DGRPAWMR;TDS(0.333)T(0.333)S(0.333)DGRPAWMR;TDS(0.962)T(0.017)S(0.021)DGRPAWMR;TDS(0.997)T(0.003)SDGRPAWMR;T(0.001)DS(0.757)T(0.11)S(0.132)DGRPAWMR;TDS(0.98)T(0.019)S(0.001)DGRPAWMR;TDS(0.974)T(0.016)S(0.01)DGRPAWMR;T(0.002)DS(0.996)T(0.002)SDGRPAWMR;T(0.001)DS(0.984)T(0.013)S(0.002)DGRPAWMR;T(0.001)DS(0.863)T(0.132)S(0.004)DGRPAWMR;T(0.001)DS(0.847)T(0.131)S(0.021)DGRPAWMR;T(0.001)DS(0.512)T(0.474)S(0.014)DGRPAWMR 203.2 4.1581e-09 83537530000.0 37325350.0 34174870.0 29939400.0 32594580.0 33745350.0 34469380.0 34642730.0 37069540.0 42927200.0 38227830.0 True False 35254838.429259464 32533057.947674327 31869341.628733695 35692359.08328218 36400917.060222946 34254243.81365272 38144755.22886334 36940954.41783572 35132702.5866498 37889161.16700172 0.9304729200487941 0.8586375877861316 0.8411202741666717 0.9420203030086407 0.960721112293325 0.9040644542821205 1.0067458358535588 0.9749741952589912 0.9272494165758264 1.0 25.17528186440118 -5.408205752408726 5.187092284238937 0.9596470129632833 0.8754395812185825 0.5338305613927059 0.0357145117139657 0.17719758410288217 6.871516755180848 0.010224538785397964 0.015285989099007514 3.9065577391554595e-06 5.408205752408726 -0.0842074317447008 TDS(ph)YSAGQSVEILDGVELGEPAHK ddPTM_KYSE-520_SHP099_60min_R1 4 TDSYSAGQSVEILDGVELGEPAHK 24 0 P42345;B1AKQ2;B1AKP8 P42345 MTOR Serine/threonine-protein kinase mTOR 1 T(0.002)DS(0.801)YS(0.197)AGQSVEILDGVELGEPAHK;T(0.156)DS(0.839)YS(0.004)AGQSVEILDGVELGEPAHK;T(0.005)DS(0.988)YS(0.007)AGQSVEILDGVELGEPAHK;T(0.059)DS(0.919)Y(0.002)S(0.017)AGQS(0.003)VEILDGVELGEPAHK 234.68 1.7236e-28 1476080000.0 1036389.0 1053088.0 867996.0 963386.0 1000286.0 1059317.0 1076328.0 1230890.0 1260630.0 1090407.0 True False 978898.4361797497 1002496.0717626861 923948.4110027037 1054945.9157874375 1079002.8173511976 1052705.4096693108 1185133.7381889948 1226620.3298818858 1031731.3698962039 1080746.8423038085 0.9057610884090576 0.9275956519342525 0.8549165954842297 0.9761267620626384 0.9983862780030027 0.9740536529584279 1.096587740809556 1.1349747062569449 0.9546466660933107 1.0 20.043597190337735 -5.831661648725884 1.2097975491385582 1.0494302092832686 0.8986489016157175 0.5243677527369872 0.054692954894292496 0.3485990404994518 1.078169151870271 0.02335464148634741 0.0315959240057598 1.4734600024256871e-06 5.831661648725884 -0.15078130766755105 TDS(ph)YSAGQSVEILDGVELGEPAHKK ddPTM_KYSE-520_SHP099_60min_R1 5 TDSYSAGQSVEILDGVELGEPAHKK 25 1 P42345;B1AKQ2;B1AKP8 P42345 MTOR Serine/threonine-protein kinase mTOR 1 T(0.207)DS(0.7)Y(0.005)S(0.056)AGQS(0.031)VEILDGVELGEPAHKK;T(0.18)DS(0.786)YS(0.033)AGQSVEILDGVELGEPAHKK;T(0.037)DS(0.955)YS(0.008)AGQSVEILDGVELGEPAHKK;T(0.005)DS(0.994)YS(0.001)AGQSVEILDGVELGEPAHKK;T(0.16)DS(0.777)Y(0.02)S(0.044)AGQSVEILDGVELGEPAHKK 274.96 2.0887e-38 5482420000.0 3424180.0 3434030.0 3266440.0 3841730.0 3442760.0 2980800.0 3305725.0 3656680.0 4378670.0 2844690.0 True False 3234233.9094663993 3269054.044215887 3476999.9488887857 4206846.864141759 3713685.6253751507 2962195.721528384 3639899.943766972 3643995.8305555307 3583613.905288164 2819488.2597353286 1.1470996193365968 1.1594494259475157 1.233202492290278 1.4920604296244402 1.3171488168295342 1.0506146678569435 1.2909789325062333 1.2924316382497014 1.2710157217056706 1.0 21.427001904949023 -10.073432382266601 4.293751163786597 0.999974214335404 1.2528791657842884 0.30936896447003526 0.11220504325888914 40366179.477496244 0.7902144531740173 10605.515122749004 0.02896448571456061 8.444377068972139e-11 10.073432382266601 0.25290495144888436 TDSEEQDKS(ph)RDEDNDEDEER ddPTM_KYSE-520_SHP099_60min_R1 2 TDSEEQDKSRDEDNDEDEER 20 2 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 1 TDS(0.009)EEQDKS(0.991)RDEDNDEDEER;T(0.001)DS(0.009)EEQDKS(0.99)RDEDNDEDEER 97.095 0.00019827 341710000.0 518210.0 424390.0 377910.0 432690.0 412900.0 429610.0 543130.0 457040.0 466550.0 428590.0 True False 489463.85827397654 404001.6673776229 402270.68327737926 473812.72750700754 445392.88092036586 426928.6446342622 598034.8808379868 455454.63491393824 381836.28076840495 424793.0260379743 1.1522408049849222 0.951055320153743 0.9469804319278499 1.1153966719421875 1.0484938631750278 1.0050274332801712 1.407826504158582 1.0721801136001299 0.8988760581353583 1.0 18.696400555590603 -5.280072402529326 24.273983819617822 1.0907054111209875 1.010188486265612 0.03539869701148757 0.1354023607680666 1676.7351495119162 2184345.988137248 0.039429360329048736 0.05862381177039591 5.2471997532430965e-06 5.280072402529326 -0.08051692485537543 TDSEEQDKS(ph)RDEDNDEDEERLEEEEQNEEEEVDN ddPTM_KYSE-520_SHP099_60min_R1 2 TDSEEQDKSRDEDNDEDEERLEEEEQNEEEEVDN 34 3 Q9NRF9 Q9NRF9 POLE3 DNA polymerase epsilon subunit 3 1 TDSEEQDKS(1)RDEDNDEDEERLEEEEQNEEEEVDN;TDSEEQDKS(1)RDEDNDEDEERLEEEEQNEEEEVDN 278.96 3.1112e-42 11711890000.0 542539.0 543134.0 558130.0 535052.0 574333.0 496582.0 487646.0 558972.0 685940.0 522728.0 True False 512443.2801453172 517041.0273792453 594107.9528395737 585903.1812107511 619529.7395922417 493482.6475402595 536942.0166463292 557033.0565970459 561390.5871402416 518097.03659623064 0.9890874564964564 0.9979617539912542 1.1467117371346418 1.1308753762808412 1.1957793537334218 0.9524907742810468 1.036373456551509 1.075151983606421 1.0835626291716296 1.0 18.98286280614264 -9.188415281479486 14.424704997809961 0.9999999999971367 1.0693919999800234 0.07234957579709422 0.07230042542961987 0.0 0.0 0.07445277636350228 0.01805745065101235 6.480144921655451e-10 9.188415281479486 0.0693919999828867 TDSEKPFR ddPTM_KYSE-520_SHP099_60min_R1 2 TDSEKPFR 8 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ; 98.03299999999999 0.0033485999999999998 1338460000.0 1510840.0 1422940.0 1022370.0 906300.0 1339960.0 1385110.0 1077210.0 1236600.0 1206080.0 1193280.0 False True 1427030.6934151284 1354579.8265235159 1088273.6060498375 992434.4795109689 1445407.2286705112 1376465.0147095346 1186104.8993564865 1232310.523224611 987086.2748026099 1182708.4675577923 1.206578571608474 1.1453201390539 0.9201537284137689 0.8391201270083696 1.2221162427755108 1.1638244355786473 1.0028717404938408 1.0419393764629448 0.8345981295296481 1.0 20.173663068833267 -4.5949483366593755 6.332050522939931 1.0126131787231758 1.1920331053808455 0.2599804753824263 0.11769082534858483 0.27267054494200743 18.163356043745992 0.03209070432445619 0.08760495681709693 2.5412749957058223e-05 4.5949483366593755 0.1794199266576697 TDSEKPFRGS(ph)QS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 TDSEKPFRGSQSPK 14 2 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 TDSEKPFRGS(1)QS(1)PK;T(0.002)DS(0.016)EKPFRGS(0.985)QS(0.997)PK;T(0.003)DS(0.33)EKPFRGS(0.896)QS(0.771)PK;T(0.289)DS(0.063)EKPFRGS(0.658)QS(0.99)PK;T(0.029)DS(0.041)EKPFRGS(0.94)QS(0.99)PK;TDS(0.011)EKPFRGS(0.992)QS(0.997)PK;TDS(0.002)EKPFRGS(0.998)QS(0.999)PK 96.391 0.0010429 27756280000.0 26594300.0 23749300.0 21076100.0 23537200.0 22546300.0 22323700.0 22897700.0 24462900.0 27066500.0 22741800.0 True False 25119061.164577268 22608347.97957395 22434699.128952283 25774168.41128277 24320565.539101128 22184369.50774392 25212422.97601676 24378043.909583773 22151905.89093997 22540325.34485268 1.114405439152788 1.0030178195603021 0.9953139001197019 1.1434692275712237 1.0789802350681237 0.9842080435103372 1.118547429563801 1.0815302590630422 0.9827677973600586 1.0 24.42600500359115 -7.7664322957655765 24.997773671703538 0.9913838588685678 1.0627317920420578 0.2395930327473208 0.05229423206851301 200.102873089312 1001788.244870002 0.04592467249035006 0.013319514718816513 1.7122520870270935e-08 7.7664322957655765 0.07134793317348997 TDSEKPFRGS(ph)QS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 2 TDSEKPFRGSQSPKR 15 3 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 TDS(0.001)EKPFRGS(0.999)QS(1)PKR;TDSEKPFRGS(1)QS(1)PKR 117.0 0.00030397 3684180000.0 5913400.0 5181400.0 5130800.0 4984800.0 5301700.0 5252300.0 4942600.0 5342000.0 6744400.0 4769100.0 True False 5585371.913929348 4932477.76656004 5461539.577570261 5458553.89326523 5718913.627453389 5219518.447458238 5442246.243127488 5323469.848832176 5519786.972488334 4726849.484303652 1.1816267753979839 1.0435021853222137 1.1554291279437348 1.1547974843267874 1.2098785134673873 1.1042277662511957 1.1513474802189996 1.1262194547361215 1.1677517955284535 1.0 22.172447495432635 -10.251401556276754 10.023169704604811 0.9999999955657165 1.1420512871130903 0.4993206887400675 0.04318368965971641 4.236246934545588e-09 3.0512028880074013e-10 0.04104743666421197 0.009955465484972044 5.6052946100823007e-11 10.251401556276754 0.14205129154737384 TDSLAAT(ph)PPAAK ddPTM_KYSE-520_SHP099_60min_R1 3 TDSLAATPPAAK 12 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 TDS(0.001)LAAT(0.999)PPAAK;TDS(0.004)LAAT(0.996)PPAAK;TDSLAAT(1)PPAAK 107.93 0.0018844 1623230000.0 4048140.0 5449000.0 3609160.0 3576680.0 3801610.0 4964330.0 3645410.0 4338300.0 5054200.0 4393010.0 True False 3823581.6044329777 5187221.860884255 3841812.2284601796 3916606.59183195 4100775.078797945 4933345.77504529 4013923.6185730933 4323251.449866837 4136484.6860136623 4354091.349110063 0.8781583338196345 1.1913442886182155 0.8823453438213719 0.899523293794116 0.941821094230397 1.1330368105514417 0.9218740023434517 0.9929170298070275 0.9500224856006115 1.0 22.05394024500041 TDSLFVLPSRDDAT(ph)PVRDEPMDAESITFK ddPTM_KYSE-520_SHP099_60min_R1 5 TDSLFVLPSRDDATPVRDEPMDAESITFK 29 2 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;H3BSK8 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 T(0.004)DS(0.004)LFVLPS(0.004)RDDAT(0.988)PVRDEPMDAESITFK;T(0.001)DS(0.006)LFVLPS(0.004)RDDAT(0.99)PVRDEPMDAESITFK;TDSLFVLPSRDDAT(1)PVRDEPMDAESITFK;TDSLFVLPSRDDAT(1)PVRDEPMDAESITFK;TDSLFVLPS(0.001)RDDAT(0.999)PVRDEPMDAESITFK 235.29 5.912699999999999e-31 2079398000.0 1348159.0 1418592.0 1089230.0 1078202.0 1238252.0 1385331.0 1180518.0 1472375.0 1741882.0 1531937.0 True False 1273373.9327816619 1350440.7109699985 1159443.508629619 1180673.9939067475 1335695.3877098693 1376684.635366559 1299856.2801854038 1467267.6747799078 1425600.13807187 1518365.23000895 0.8386479798237714 0.8894043964389505 0.7636130528507852 0.7775955156058125 0.8796930812898002 0.9066887255831353 0.8560893350921516 0.9663469933194262 0.9389046257753589 1.0 20.534087430001836 -7.10719634714669 0.7081281804537631 0.9933822270742728 0.8222651808821493 0.6639115074230922 0.04197025003243182 0.450009357563219 0.4322289520733959 0.04091177509447722 0.021472581525245202 7.812745058281959e-08 7.10719634714669 -0.17111704619212353 TDSREDEIS(ph)PPPPNPVVK ddPTM_KYSE-520_SHP099_60min_R1 13 TDSREDEISPPPPNPVVK 18 1 K7EPB2;P10644-2;P10644;K7EMU2;K7EMZ6;K7EIE5;K7EID3;K7EJ40;K7EK41 K7EPB2 PRKAR1A cAMP-dependent protein kinase type I-alpha regulatory subunit;cAMP-dependent protein kinase type I-alpha regulatory subunit, N-terminally processed 1 TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;T(0.002)DS(0.018)REDEIS(0.98)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDS(0.001)REDEIS(0.999)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK;TDSREDEIS(1)PPPPNPVVK 231.21 3.0769000000000003e-19 127635640000.0 36668960.0 34099950.0 31396090.0 28526600.0 31657230.0 33125880.0 29977250.0 31211430.0 40850530.0 31138920.0 True False 34634859.69104054 32461737.21693156 33419932.196920138 31237759.487165004 34148473.89600057 32919129.09549873 33007642.979766466 31103164.83413249 33433103.510059237 30863053.39451319 1.1222110543734438 1.0517992760464387 1.0828459442986127 1.0121409274663158 1.1064515704097981 1.066619322291393 1.0694872784568534 1.0077798990446611 1.0832727106645563 1.0 24.879377464266902 -8.028751006839068 0.008923500633923885 1.3998066958672789e-05 2.085203164711166 0.3129381197662916 0.033061616184360904 2429.108658897147 13.982307442215841 1652.8732301881853 1612.5868253751592 9.35942122121967e-09 8.028751006839068 2.0851891666442075 TDSS(ph)PNQAR ddPTM_KYSE-520_SHP099_60min_R1 3 TDSSPNQAR 9 0 P26599;P26599-2;P26599-3;A6NLN1;K7ES59;A0A087WU68 P26599 PTBP1 Polypyrimidine tract-binding protein 1 1 TDS(0.013)S(0.987)PNQAR;TDS(0.003)S(0.997)PNQAR;TDS(0.037)S(0.963)PNQAR 227.36 1.9603e-09 1428240000.0 2210720.0 1746753.0 1935660.0 2168520.0 2046880.0 2697150.0 3729430.0 1673420.0 2760810.0 2832850.0 True False 2088086.9546389382 1662836.3639502947 2060435.7407655062 2374615.488810688 2207957.810845915 2680316.0863930085 4106437.180129271 1667615.2965991632 2259516.4983564904 2807753.1529239486 0.7436860866719848 0.592230254365005 0.7338379225466461 0.8457351339229382 0.7863788910882653 0.9546124393455924 1.462534972439758 0.5939323030810367 0.8047418613005444 1.0 21.420984674230677 -5.61077003672909 1.3998395373493706 0.9558466840767096 0.6741238999559795 0.22527151044468718 0.21042496946762898 0.6781140678479624 2.7383846463885684 0.08129943067988497 0.13168504083943736 2.4503603887166066e-06 5.61077003672909 -0.28172278412073004 TDST(ph)SDGRPAWMR ddPTM_KYSE-520_SHP099_60min_R1 2 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y706;A0A2R8Y5T0;A0A2R8Y542;A0A2R8Y6I5 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 T(0.006)DS(0.084)T(0.78)S(0.131)DGRPAWMR;TDS(0.115)T(0.861)S(0.024)DGRPAWMR 157.09 6.925e-05 4144030000.0 2678690.0 2530990.0 2334810.0 2423620.0 2522740.0 2408110.0 2571590.0 2757850.0 3306900.0 2803290.0 True False 2530097.72586387 2409397.4413065584 2485315.5884280843 2653960.1161120753 2721265.285572886 2393080.092246954 2831551.413499822 2748283.662037028 2706450.3201651247 2778455.03152662 0.9106131634866552 0.8671716525794253 0.8944955236732874 0.9551927549656468 0.9794167098963947 0.8612988387766268 1.0191100382661324 0.9891409545422751 0.9740846223730558 1.0 21.405851460208748 -5.795013830509147 0.4125088745889715 1.0023269032652478 0.8642732012325707 0.4576243116457437 0.03992973920639769 1.6293155905532337 0.499870592754215 0.03955768165846909 0.09760958655643316 1.6031943346718392e-06 5.795013830509147 -0.13805370203267708 TDSTESSGTQS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 TDSTESSGTQSPK 13 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TDSTESSGTQS(1)PK;TDSTESSGTQS(1)PK;TDSTESSGTQS(1)PK 342.32 2.41e-51 924740000.0 1724720.0 1396840.0 1176840.0 1435050.0 1257570.0 1697110.0 1877950.0 1324570.0 1744240.0 1594220.0 True False 1629046.3434559177 1329733.7097004151 1252700.9894105757 1571436.720536484 1356533.6044054835 1686517.7069790107 2067791.5130257905 1319975.3758269625 1427529.9847122126 1580096.451084391 1.0309790534229308 0.8415522411861905 0.792800330986675 0.9945194924386014 0.8585131644808894 1.0673511138016827 1.3086489192521782 0.8353764575074438 0.9034448395428806 1.0 20.591581194343085 -6.262437998125193 24.991787789191847 1.0305305868692016 0.8991091606529348 0.16611568023565715 0.13290176945811016 168.47134595738396 4216174.086959719 0.047875713836884846 0.0446624354183617 5.464645601035033e-07 6.262437998125193 -0.13142142621626685 TDSTESSGTQS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 2 TDSTESSGTQSPKR 14 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TDS(0.001)T(0.002)ES(0.024)S(0.096)GT(0.358)QS(0.518)PKR;TDSTESSGT(0.002)QS(0.998)PKR 131.82 1.5249000000000001e-05 289180000.0 203419.0 170405.0 184836.0 139793.0 150686.0 165088.0 118769.0 126931.0 170824.0 141576.0 True False 192134.942564277 162218.4880168805 196750.8243080566 153078.88468970207 162544.1309139411 164057.62455571556 130775.32959373783 126490.70598691821 139806.6677226065 140321.7467844612 1.369245658403915 1.1560466694164904 1.4021406433193302 1.0909134770452669 1.1583673567263542 1.169153237578445 0.9319676571202682 0.9014333764046715 0.9963292998151893 1.0 17.09837908672202 -6.180433275929498 0.807937331415574 0.9408787358404053 1.2941374188027424 0.6788503177847114 0.09146953895544745 0.3642062717047307 0.5217239916030884 0.05818231265428292 0.06045862771006767 6.600346327759998e-07 6.180433275929498 0.3532586829623371 TDSTS(ph)DGRPAWMR ddPTM_KYSE-520_SHP099_60min_R1 1 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y706;A0A2R8Y5T0;A0A2R8Y542;A0A2R8Y6I5 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 TDS(0.27)T(0.27)S(0.46)DGRPAWMR 169.17 1.0945e-06 6593700000.0 1062300.0 1070700.0 955080.0 1047100.0 950100.0 1023900.0 1026300.0 1174100.0 1203000.0 984470.0 True False 1003372.1013574504 1019261.9648465357 1016645.9849820314 1146616.0691779056 1024867.4646704751 1017509.4603035792 1130048.419722765 1170027.3211370008 984565.5251621295 975748.3617060691 1.0283103110755747 1.0445951075586581 1.0419141090890012 1.1751145215074499 1.0503399287071542 1.0427990455699991 1.1581350930960381 1.1991076460443555 1.0090363087473126 1.0 19.896149609799718 -5.047254497026283 24.976058138612835 1.0988849358213053 1.038153010775895 0.1100469079557308 0.06546583306197884 734.7590241897109 388351.52946919476 0.017643031140803626 0.03055983267248534 8.969030543340484e-06 5.047254497026283 -0.06073192504541036 TDSTSDGRPAWMR ddPTM_KYSE-520_SHP099_60min_R1 2 TDSTSDGRPAWMR 13 1 Q14204;A0A2R8Y706;A0A2R8Y5T0;A0A2R8Y542;A0A2R8Y6I5 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ; 128.54 5.452e-05 1046480000.0 792840.0 766300.0 518770.0 488180.0 789510.0 782420.0 563770.0 585060.0 588140.0 622140.0 False True 748859.5847126439 729485.7977602496 552210.7442613483 534576.4804233311 851639.9453025864 777536.6265560369 620761.3734649753 583030.5634140309 481348.6018028719 616628.3236175954 1.2144424056282115 1.1830235002514145 0.8955325649358333 0.8669346832579994 1.3811236245299925 1.26094860838444 1.0067026597531759 0.9455137577747722 0.7806138371635719 1.0 19.23404163278259 -7.10679987371142 3.186023713460265 0.8959626569751399 1.12433262640379 0.2920519891364003 0.15605384839591002 0.3727353629167951 7.121972915664682 0.09006349090182063 0.04847151889811141 7.819880677839311e-08 7.10679987371142 0.22836996942865018 TDSVIIADQT(ph)PT(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 1 TDSVIIADQTPTPTR 15 0 P17544-4;P17544-2;P17544;K7ELQ4;P17544-3;P17544-1;K7ESA4;P17544-5 P17544-4 ATF7 Cyclic AMP-dependent transcription factor ATF-7 2 TDSVIIADQT(1)PT(0.986)PT(0.014)R 141.86 0.00048087 0.0 299290.0 295930.0 225950.0 202910.0 269230.0 325420.0 280000.0 333050.0 369550.0 331910.0 True False 282687.78708017676 281713.0786000142 240515.09853278226 222194.5053928838 290416.86929084547 323388.9330715801 308305.1325366601 331894.7272844543 302449.03559739364 328969.53562207246 0.8593129650914995 0.8563500509775241 0.7311166308393108 0.6754257806052466 0.8828077917357151 0.9830361114139654 0.9371844476530736 1.0088919834380723 0.9193831125592549 1.0 18.327594463133074 -5.991942712490372 6.0639558819130475 0.9650495046435715 0.7813509908986563 0.7134722305534189 0.056440340364067344 0.09218899027768544 13.539201533431319 0.019432225377776103 0.02127368719753271 1.0187257586601816e-06 5.991942712490372 -0.1836985137449152 TDSVKT(ph)PESEGNPLLEQLEK ddPTM_KYSE-520_SHP099_60min_R1 5 TDSVKTPESEGNPLLEQLEK 20 1 Q8WYK2;Q8WYK2-2 Q8WYK2 JDP2 Jun dimerization protein 2 1 T(0.067)DS(0.13)VKT(0.801)PES(0.002)EGNPLLEQLEK;T(0.005)DS(0.021)VKT(0.972)PES(0.002)EGNPLLEQLEK;TDSVKT(0.997)PES(0.003)EGNPLLEQLEK;TDSVKT(0.994)PES(0.006)EGNPLLEQLEK;T(0.001)DS(0.052)VKT(0.948)PESEGNPLLEQLEK 331.54 2.4559999999999995e-64 1787539000.0 1415300.0 1460080.0 1222510.0 1141510.0 1247540.0 1575450.0 1416550.0 1783720.0 1935610.0 1688790.0 True False 1336790.487669397 1389935.5651752406 1301314.9506851588 1249998.7671925027 1345714.3004683775 1565617.0321664943 1559748.6981957373 1777532.6916433775 1584152.0167573297 1673828.6344587372 0.7986423819913155 0.8303929903939667 0.7774481353080464 0.7467901680369523 0.8039737597771104 0.9353508477125347 0.9318449129651258 1.0619561973368767 0.9464242540393593 1.0 20.674720402545965 -6.432714526671153 1.8775673295842117 0.9946837845739734 0.7873125232655791 0.8604822023873979 0.03747993559895879 0.12085800309303124 0.8467810774840675 0.016663242912776592 0.013503785909286314 3.6922021710317503e-07 6.432714526671153 -0.20737126130839434 TDT(ph)SPVLETAGTVAAMAATPSAR ddPTM_KYSE-520_SHP099_60min_R1 2 TDTSPVLETAGTVAAMAATPSAR 23 0 Q8WWH5 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 1 T(0.072)DT(0.512)S(0.416)PVLETAGTVAAMAATPSAR;T(0.08)DT(0.518)S(0.402)PVLETAGTVAAMAATPSAR 136.49 5.5284e-06 237810000.0 216740.0 308430.0 223470.0 194105.0 193641.0 295690.0 205030.0 249620.0 285520.0 312570.0 True False 204717.00013952202 293612.55983713135 237875.2337646419 212552.68084020377 208879.44503342337 293844.4890293635 225756.43329996933 248754.126481746 233676.7653734755 309800.8729757802 0.660801882748492 0.947746069973423 0.7678326774219214 0.6860945187098322 0.6742377548101786 0.9484947095431066 0.7287146454155364 0.8029484361756245 0.7542805258387506 1.0 18.24098168388403 -6.239688327834833 24.934305149215348 0.827186160439042 0.7562117913965891 0.1600745090136967 0.10850778278443485 2074.0513806282784 2377589.073758227 0.03578035902818933 0.035752297787375084 5.758530509938647e-07 6.239688327834833 -0.07097436904245291 TDTGIVTVEQS(ph)PSSSK ddPTM_KYSE-520_SHP099_60min_R1 5 TDTGIVTVEQSPSSSK 16 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TDTGIVT(0.008)VEQS(0.837)PS(0.144)S(0.009)S(0.003)K;TDTGIVTVEQS(0.975)PS(0.025)SSK;TDTGIVTVEQS(0.992)PS(0.008)SSK;TDTGIVTVEQS(0.431)PS(0.129)S(0.431)S(0.008)K;TDTGIVTVEQS(0.99)PS(0.009)S(0.001)SK 398.14 1.5463999999999996e-86 1966660000.0 3239400.0 3406650.0 2391000.0 2074710.0 2221640.0 3229840.0 2349470.0 2827550.0 3343430.0 3276880.0 True False 3059704.0244161976 3242989.4205141044 2545127.68573526 2271889.814615695 2396470.428597535 3209681.3705116855 2586977.356217526 2817741.8890051283 2736347.3930114857 3247849.3925740607 0.9420707842586414 0.9985036337980855 0.7836347619918843 0.6995059006769782 0.7378637796681295 0.9882482167585593 0.7965201102404674 0.8675715984391587 0.8425105546051236 1.0 21.631053303563935 -8.923964071221194 14.881396854487933 0.9999902789873647 0.8482687089867962 0.17773491449851075 0.09620003568731576 0.0 0.0 0.09996973504179 0.024246222173077144 1.191340562448027e-09 8.923964071221194 -0.15172157000056852 TDTS(ph)PVLETAGTVAAMAATPSAR ddPTM_KYSE-520_SHP099_60min_R1 2 TDTSPVLETAGTVAAMAATPSAR 23 0 Q8WWH5 Q8WWH5 TRUB1 Probable tRNA pseudouridine synthase 1 1 T(0.001)DT(0.397)S(0.602)PVLETAGTVAAMAATPSAR;TDT(0.012)S(0.988)PVLETAGTVAAMAATPSAR 391.06 8.115699999999998e-100 451340000.0 205946.0 263870.0 172528.0 136871.0 162694.0 231675.0 159646.0 208013.0 249560.0 231290.0 True False 194521.76483682732 251193.28912305503 183649.4309345604 149879.1786882333 175497.09219776682 230229.03038952246 175784.575674813 207291.45145359938 204246.19489564488 229240.95054089738 0.8485471918426895 1.095760982190838 0.8011196538019795 0.65380630439104 0.7655573394879006 1.0043102240079431 0.7668114063392545 0.9042514043171265 0.8909673180717624 1.0 17.806505257908366 -9.451596574447777 9.572687325300725 1.0000000314806001 0.858381715514426 0.11114320090162377 0.11959855450410697 0.0 0.0 0.12155212909583121 0.029480721604754467 3.535114017165415e-10 9.451596574447777 -0.14161831596617414 TDVKDDLSDPPVASSCISEKS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 TDVKDDLSDPPVASSCISEKSPR 23 2 Q8IX90-3;Q8IX90 Q8IX90-3 SKA3 Spindle and kinetochore-associated protein 3 1 TDVKDDLSDPPVAS(0.177)S(0.177)CIS(0.177)EKS(0.468)PR;TDVKDDLSDPPVAS(0.001)S(0.001)CIS(0.047)EKS(0.951)PR;TDVKDDLSDPPVAS(0.005)S(0.002)CIS(0.006)EKS(0.987)PR;TDVKDDLS(0.001)DPPVAS(0.081)S(0.081)CIS(0.156)EKS(0.681)PR;TDVKDDLSDPPVASSCIS(0.001)EKS(0.999)PR;TDVKDDLSDPPVAS(0.026)S(0.019)CIS(0.039)EKS(0.916)PR;TDVKDDLSDPPVASSCISEKS(1)PR;TDVKDDLSDPPVAS(0.255)S(0.195)CIS(0.116)EKS(0.433)PR;TDVKDDLS(0.003)DPPVAS(0.038)S(0.034)CIS(0.027)EKS(0.897)PR 225.57 1.7842999999999997e-21 16627060000.0 11314260.0 11003920.0 10518830.0 10231700.0 10789570.0 10774830.0 11008830.0 11659520.0 15184090.0 11599380.0 True False 10686635.443381878 10475275.165979354 11196890.61252306 11204117.691727217 11638647.77474436 10707580.28924974 12121709.972226998 11619075.846472427 12427042.015759801 11496618.517381087 0.929545972776722 0.9111614123876841 0.9739290379684352 0.9745576644809381 1.0123540028007842 0.9313677994152416 1.054371766263347 1.010651595415313 1.0809301880350348 1.0 23.454706250113357 -5.376405383345497 0.4713215477378657 1.0371396983403571 0.8951119655189642 0.5286639275896247 0.03580435337017742 1.4476348525782203 0.5103851126192541 0.028620174404627698 0.10371380532823948 4.203340929063131e-06 5.376405383345497 -0.14202773282139292 TDWLDGK ddPTM_KYSE-520_SHP099_60min_R1 6 TDWLDGK 7 0 E9PKY5;Q9UNP9-2;Q9UNP9;Q9UNP9-3;E9PEQ6;P30405 E9PKY5;P30405 PPIE;PPIF Peptidyl-prolyl cis-trans isomerase;Peptidyl-prolyl cis-trans isomerase E;Peptidyl-prolyl cis-trans isomerase F, mitochondrial 0 ;;;;; 140.98 0.012395 2322744000.0 5204660.0 5941540.0 3999840.0 4287080.0 5828850.0 6405250.0 4883240.0 4587410.0 5371250.0 5296010.0 False True 4915947.134567515 5656099.499966646 4257676.086370278 4694522.794242402 6287547.333380173 6365272.458843145 5376885.55502972 4571497.345419544 4395966.398193754 5249091.471633432 0.9365329526326108 1.0775387570463806 0.8111262890690983 0.8943495878500174 1.1978353525288425 1.2126427007876803 1.0243459433097897 0.8709121131007778 0.8374718600256742 1.0 22.323636307761053 -7.2555100141333275 22.6222074922903 0.8906439852253775 1.0252541496722547 0.1603804150240533 0.12396241586101892 235.04956524675606 896794.0606156631 0.06653940419816069 0.036980498678488495 5.552518137567945e-08 7.2555100141333275 0.13461016444687723 TDYIPLLDVDEKT(ph)GNSESK ddPTM_KYSE-520_SHP099_60min_R1 1 TDYIPLLDVDEKTGNSESK 19 1 E7EVA0;A0A0J9YW37;A0A0J9YVV8;P27816-7;P27816-6;P27816;P27816-2;P27816-5;H7C456 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TDYIPLLDVDEKT(0.543)GNS(0.356)ES(0.101)K 80.98 0.0029306 0.0 119560.0 131890.0 132970.0 81718.0 86594.0 85063.0 74789.0 91446.0 147820.0 92644.0 True False 112927.76846304898 125553.80642907397 141541.45895952237 89484.45415058748 93408.45514753736 84532.09026448232 82349.40199030105 91128.79516965682 120979.6142389575 91823.24623594136 1.2298385549654736 1.3673422752497921 1.5414556200270815 0.9745294118730641 1.017263699298136 0.9205957503100654 0.8968252089313298 0.9924370887030052 1.317527088163474 1.0 16.48657181623606 -5.274241703146432 24.84504210085959 1.00769400356218 1.3783251622692794 0.623702300450375 0.12889470646099538 440.25594487019214 854389.1414707847 0.03732897773684594 0.055780100797885326 5.318122010310983e-06 5.274241703146432 0.3706311587070994 TDYYAR ddPTM_KYSE-520_SHP099_60min_R1 4 TDYYAR 6 0 P46777;A0A2R8Y4A2;R4GNJ2 P46777 RPL5 60S ribosomal protein L5 0 ;;; 187.48 0.0092145 15886000000.0 19260200.0 19790800.0 13972500.0 12510100.0 19417500.0 19909700.0 15385600.0 15964200.0 16198900.0 16522200.0 False True 18191798.31174319 18840020.261403594 14873189.706790466 13699056.142701283 20945546.779537905 19785436.17717179 16940926.596985877 15908823.91627229 13257588.101038063 16375826.162077075 1.110893467706168 1.1504775438464943 0.90824057116786 0.8365413755078434 1.2790528289829632 1.2082099541939841 1.0345082091929783 0.9714822176797246 0.8095828552296075 1.0 23.9650643568076 -7.338743918008061 3.078148841454911 0.9038223162723643 1.0769272924218485 0.22187248554378325 0.13084378299200686 0.43576224630172533 7.96724359155497 0.09132598020194722 0.038962698381662345 4.5841211000331466e-08 7.338743918008061 0.17310497614948417 TEAELSQDLETS(ph)PTAKPQIK ddPTM_KYSE-520_SHP099_60min_R1 2 TEAELSQDLETSPTAKPQIK 20 1 Q5VT06;H0Y7F7 Q5VT06 CEP350 Centrosome-associated protein 350 1 TEAELSQDLET(0.128)S(0.852)PT(0.02)AKPQIK;TEAELSQDLET(0.166)S(0.834)PT(0.001)AKPQIK 214.31 6.4691e-19 1291450000.0 1282190.0 1255800.0 1014920.0 875340.0 972700.0 1165660.0 1005690.0 1313590.0 1431180.0 1399080.0 True False 1211064.3647176027 1195469.4830057705 1080343.367129417 958532.0504194325 1049245.9560940661 1158384.6835603788 1107354.9597885509 1309033.46288421 1171313.7891118326 1386685.239667769 0.8733520268866187 0.8621058685907617 0.7790833393368004 0.6912398163617027 0.7566576221330885 0.8353623810389098 0.7985625923687325 0.9440018725502817 0.8446861303524537 1.0 20.40320892028463 -7.253990761960904 23.949425986497257 0.9207580039571437 0.7966746054849744 0.4858867309692614 0.06106946454766964 301.12296687489805 968201.8814805131 0.03148988679457448 0.017683916045995854 5.5719760116282915e-08 7.253990761960904 -0.12408339847216932 TEAQDLCRAS(ph)PEPPGPESSSR ddPTM_KYSE-520_SHP099_60min_R1 3 TEAQDLCRASPEPPGPESSSR 21 1 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 TEAQDLCRAS(1)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR;TEAQDLCRAS(1)PEPPGPESSSR 153.97 2.8962e-07 1308510000.0 849300.0 975910.0 907740.0 564600.0 666390.0 717450.0 502861.0 577544.0 1276750.0 685610.0 True False 802187.6359624247 929025.8187292265 966254.3728353531 618259.4142468203 718831.1017595616 712972.1284254349 553695.0973304198 575540.634663783 1044924.3842483354 679536.0287965089 1.180493162935213 1.367147258364764 1.421932512609576 0.9098258047358982 1.057826327520332 1.0492043073685775 0.8148134519240143 0.8469611768534087 1.5377026970872272 1.0 19.374190518715842 -5.259955105554071 24.988491069853644 1.0174086045431632 1.3275866129586373 0.3148938936547606 0.19683176946646133 151.65810420366543 2553216.9595051818 0.05396397332208126 0.08736304742071391 5.495976846376311e-06 5.259955105554071 0.31017800841547416 TEAQGEEDDAEGQDQDKKS(ph)PKPK ddPTM_KYSE-520_SHP099_60min_R1 8 TEAQGEEDDAEGQDQDKKSPKPK 23 3 A0A2R8Y611;O14617-2;O14617-5 A0A2R8Y611 AP3D1 AP-3 complex subunit delta-1 1 TEAQGEEDDAEGQDQDKKS(1)PKPK;TEAQGEEDDAEGQDQDKKS(1)PKPK;TEAQGEEDDAEGQDQDKKS(1)PKPK;TEAQGEEDDAEGQDQDKKS(1)PKPK;TEAQGEEDDAEGQDQDKKS(1)PKPK;TEAQGEEDDAEGQDQDKKS(1)PKPK;TEAQGEEDDAEGQDQDKKS(1)PKPK;TEAQGEEDDAEGQDQDKKS(1)PKPK 196.15 1.9829999999999997e-15 30186707000.0 6168996.0 5356679.0 4681545.0 5241027.0 5545081.0 5332440.0 5261101.0 5822801.0 5989390.0 5138897.0 True False 5826789.494291356 5099336.100300895 4983324.881436849 5739132.630307781 5981447.327504931 5299158.263991813 5792944.432477701 5802603.062382968 4901867.756235079 5093370.370581368 1.1439948541629958 1.0011712734958338 0.9783943673564116 1.1267848620348226 1.1743593911907482 1.0404030884145101 1.1373499296137937 1.1392462436853275 0.9624015925776019 1.0 22.2801891976873 -3.743664721803159 8.397539266409023 1.0712085198236416 11.48726333468874 0.0890715920862033 0.07356040077925897 39552.25505935347 8697.5618241418 0.019416383620699994 7857303.014366423 0.0001804410219848168 3.743664721803159 10.416054814865097 TEDEEFLIQHLLQAPS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 15 TEDEEFLIQHLLQAPSPPR 19 0 Q9ULL5;Q9ULL5-2 Q9ULL5 PRR12 Proline-rich protein 12 1 TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR;TEDEEFLIQHLLQAPS(1)PPR 242.67 2.3871e-26 9757441000.0 1578222.0 1682732.0 1461539.0 1216727.0 1301022.0 1519780.0 1224372.0 1565126.0 1933902.0 1562025.0 True False 1490674.879552444 1601891.0288877732 1555752.1424850824 1332364.3682576893 1403405.029597424 1510294.4892862318 1348143.4704792004 1559696.943209154 1582754.1465021544 1548186.6737370593 0.962852157843607 1.034688552783548 1.004886664429013 0.8605967167005696 0.9064830833415216 0.9755247961414354 0.870788706135166 1.007434678044548 1.0223277162576623 1.0 20.562148005301164 -9.507689920699072 6.6588103409086585 0.9999993676245705 0.9587397768076875 0.037808050577938235 0.0589145422648062 79769209.32545972 0.0 0.06064373260671362 0.015160933151678413 3.106776985425575e-10 9.507689920699072 -0.04125959081688302 TEDGDWEWS(ph)DDEMDEK ddPTM_KYSE-520_SHP099_60min_R1 18 TEDGDWEWSDDEMDEK 16 0 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK;TEDGDWEWS(1)DDEMDEK 400.29 9.924799999999997e-87 26437049000.0 17050220.0 14585210.0 12965514.0 13695199.0 14308350.0 13785150.0 15240239.0 15045110.0 16625450.0 13599377.0 True False 16104410.307829095 13884514.618753461 13801291.777995892 14996786.59534828 15434335.741624875 13699111.765508248 16780871.088519208 14992922.024965053 13606687.373488545 13478897.099935208 1.1947869464710512 1.0300927825037112 1.023918476094178 1.1126122919523118 1.145074083375788 1.0163377362361568 1.244973603114744 1.112325579296627 1.0094807663123975 1.0 23.684199118183123 -7.772162498018612 8.821582540653349 1.0041657194871954 1.1071435049042018 0.2637282245381618 0.07023249605849939 0.23281902565043341 131.0787898267422 0.060189323896328216 0.017767636076416345 1.6898085452569638e-08 7.772162498018612 0.10297778541700642 TEDGDWEWS(ph)DDEMDEKSEEGK ddPTM_KYSE-520_SHP099_60min_R1 20 TEDGDWEWSDDEMDEKSEEGK 21 1 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 T(0.003)EDGDWEWS(0.996)DDEMDEKS(0.001)EEGK;T(0.001)EDGDWEWS(0.998)DDEMDEKS(0.001)EEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;T(0.001)EDGDWEWS(0.992)DDEMDEKS(0.007)EEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK;TEDGDWEWS(1)DDEMDEKSEEGK 250.06 4.731100000000001e-27 52381510000.0 30176850.0 30639070.0 29300140.0 25326110.0 28288050.0 25714520.0 21350610.0 24456120.0 39779840.0 25625870.0 True False 28502879.97444096 29167123.087018292 31188873.906281553 27733095.879827376 30514158.59801247 25554026.142363135 23508938.020673368 24371287.427821305 32556823.824160777 25398844.72842515 1.1222116706175191 1.1483641637596167 1.2279642731693416 1.0919038317041974 1.201399470105131 1.0061097823777911 0.925590839742538 0.9595431480608309 1.2818230188133228 1.0 24.598259541426437 -6.26799825546749 24.473782436815277 1.0252708904706067 1.1579868064259704 0.2879450221166152 0.09674809333791992 505.8735856805628 1887609.1904777084 0.03379981458722829 0.030512924181773104 5.395127896983407e-07 6.26799825546749 0.1327159159553637 TEDGGEFEEGASENNAKES(ph)S(ph)PEKEAEEGCPEKESEEGCPK ddPTM_KYSE-520_SHP099_60min_R1 1 TEDGGEFEEGASENNAKESSPEKEAEEGCPEKESEEGCPK 40 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 2 T(0.001)EDGGEFEEGAS(0.003)ENNAKES(0.999)S(0.998)PEKEAEEGCPEKESEEGCPK 113.4 8.321399999999999e-05 1226500000.0 628760.0 576070.0 535990.0 480580.0 476550.0 560220.0 462950.0 601090.0 713930.0 482550.0 True False 593881.4293980148 548394.7325013009 570540.7730143222 526254.1787083547 514051.77380140574 556723.4591769426 509749.5039565955 599004.9590854604 584298.3087107214 478274.9824182195 1.24171543825118 1.146609696640512 1.192913687706589 1.100317177468799 1.0748038109839955 1.1640237930950885 1.0658084212961272 1.2524279569397812 1.221678595347878 1.0 18.867480803320884 -3.403762227019087 1.1349920536109042 1.136760106846855 1.7344511630068273 0.16515109313298348 0.07289260070123327 19.733408166093817 4.959729997020238 0.022095333804936505 22.38699909916786 0.00039467332362785944 3.403762227019087 0.5976910561599724 TEDGGWEWS(ph)DDEFDEESEEGK ddPTM_KYSE-520_SHP099_60min_R1 3 TEDGGWEWSDDEFDEESEEGK 21 0 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 TEDGGWEWS(1)DDEFDEESEEGK;TEDGGWEWS(1)DDEFDEESEEGK;TEDGGWEWS(1)DDEFDEESEEGK 161.16 1.0440000000000001e-09 214912000.0 813394.0 786040.0 688229.0 592388.0 833832.0 828509.0 644712.0 778733.0 883547.0 891271.0 True False 768273.4133592602 748277.4585299068 732593.3425453339 648688.3774120534 899449.8345449024 823337.9680111918 709885.7807427685 776031.7569806481 723117.1372073343 883375.0323383457 0.8697024312828893 0.8470665698453944 0.8293118049828918 0.7343295357747854 1.0181970302737737 0.9320367203856417 0.8036063447069125 0.8784850472018056 0.8185845317511417 1.0 19.752666531140562 -5.74604089835782 24.999987249886637 0.8983428929499965 0.8226864343917311 0.25742862169309977 0.07226408156613533 416.7035660889028 676530.4364267464 0.02207470953743416 0.028390380176572715 1.7945646212267912e-06 5.74604089835782 -0.07565645855826542 TEDGGWEWS(ph)DDEFDEESEEGKAAISQLR ddPTM_KYSE-520_SHP099_60min_R1 3 TEDGGWEWSDDEFDEESEEGKAAISQLR 28 1 C9JIG9;O95747 C9JIG9 OXSR1 Serine/threonine-protein kinase OSR1 1 T(0.005)EDGGWEWS(0.995)DDEFDEESEEGKAAISQLR;TEDGGWEWS(1)DDEFDEESEEGKAAISQLR;TEDGGWEWS(1)DDEFDEESEEGKAAISQLR 298.86 1.2989e-52 743040000.0 423569.0 457182.0 450231.0 347962.0 410367.0 378754.0 270416.0 300407.0 587370.0 354387.0 True False 400072.78320613207 435218.29047582735 479253.61065506976 381032.2038614098 442660.54823116434 376390.0557943374 297752.28828583396 299364.9582325206 480718.4143927508 351247.4068889137 1.1390056562970157 1.2390647786717197 1.3644331637916962 1.0847972010279237 1.2602528575283152 1.071581023552938 0.8476996055945312 0.8522908706545937 1.3686034543303658 1.0 18.42212804900222 -6.418936924270879 4.6571866397243 0.9993528574334721 1.2183625225183201 0.2822934838431036 0.15142471452553938 0.2834352580049937 9.924585625421308 0.05490513720737111 0.04762910681856625 3.811211723590518e-07 6.418936924270879 0.21900966508484798 TEDPDLPAFYFDPLINPISHR ddPTM_KYSE-520_SHP099_60min_R1 1 TEDPDLPAFYFDPLINPISHR 21 0 Q6P2Q9;I3L0J9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 124.35 0.0001085 20852000.0 15076.0 17672.0 15590.0 16583.0 20436.0 17827.0 15778.0 13287.0 16915.0 15139.0 False True 14239.704226739088 16823.010593787214 16594.956344881954 18159.04333413926 22044.19693506563 17715.735080410122 17372.99421844081 13240.910498209114 13843.662392450047 15004.880237963782 0.9490048571471617 1.1211692680640921 1.105970596346056 1.2102091483672854 1.4691351470631338 1.1806648769903287 1.1578229178054666 0.8824402653150369 0.922610655526877 1.0 13.873144183604927 -7.221631704422162 6.656232682862095 0.9269053061566749 1.1803379023824239 0.42808073550350756 0.12434323730935924 0.20635627657020852 26.983284804241816 0.06549491971331475 0.03688281672757934 6.002999339592041e-08 7.221631704422162 0.253432596225749 TEDVMFIS(ph)DNESFNPSLWEEQR ddPTM_KYSE-520_SHP099_60min_R1 1 TEDVMFISDNESFNPSLWEEQR 22 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8 Q96RT1-7 ERBB2IP Protein LAP2 1 T(0.001)EDVMFIS(0.996)DNES(0.004)FNPSLWEEQR 112.34 0.00012204 30792000.0 13181.0 18223.0 14554.0 17637.0 17505.0 16172.0 15580.0 19205.0 26920.0 16536.0 True False 12449.823654327934 17347.539726719344 15492.174127223341 19313.215177242586 18882.543910174387 16071.064549301183 17154.97844614702 19138.3823374807 22032.006597975495 16389.503904813326 0.7596217510080722 1.058454229455027 0.9452497291680406 1.178389247741087 1.1521119870278012 0.9805705311544773 1.0467051684895041 1.1677218815549428 1.3442753805077077 1.0 14.000484565597711 -3.5631666741404002 0.8502047262764209 1.1216144093253768 1.1406132139678504e-10 0.4750700374136776 0.10946986174110065 6.303515431191301 1.5128676876402685 0.03928235340966603 8.75440895915516 0.00027342191824805483 3.5631666741404002 -1.1216144092113154 TEEARPSPAPGPGT(ph)PTGT(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 1 TEEARPSPAPGPGTPTGTPTR 21 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 2 TEEARPS(0.006)PAPGPGT(0.965)PT(0.338)GT(0.677)PT(0.013)R 51.966 0.055384 0.0 123400.0 137300.0 125590.0 114690.0 122810.0 131010.0 116010.0 111580.0 130160.0 98951.0 True False 116554.75600819872 130703.90190849856 133685.73235110485 125590.10311719411 132474.4483066846 130192.31799430797 127737.42294849288 111192.95502296773 106526.22506658571 98074.37112271319 1.1884323567302042 1.3327019119496415 1.3631056801152852 1.2805598616589908 1.350755011632235 1.3274856265089683 1.302454672777504 1.1337615908221346 1.0861780080475596 1.0 16.581588558961666 -7.500199497134999 1.7051778276871556 1.0207576680506594 1.3143170705251404 0.833145319598378 0.049068843490126295 0.14132224945108518 0.7318499575726578 0.042770018310481245 0.014128781427331502 3.160825372642596e-08 7.500199497134999 0.293559402474481 TEEARPSPAPGPGT(ph)PTGTPTR ddPTM_KYSE-520_SHP099_60min_R1 1 TEEARPSPAPGPGTPTGTPTR 21 1 Q4KMP7 Q4KMP7 TBC1D10B TBC1 domain family member 10B 1 TEEARPSPAPGPGT(0.99)PT(0.009)GT(0.001)PTR 91.54700000000001 0.0049813 439640000.0 434380.0 466560.0 415840.0 336390.0 338450.0 415050.0 341100.0 457160.0 491190.0 476290.0 True False 410284.07548493816 444145.7572791622 442645.7117675244 368360.4044606582 365084.0894829205 412459.5189950195 375581.7168151956 455574.21866194566 402002.2778922576 472070.44114801293 0.8691162159765426 0.9408463622485204 0.9376687739462537 0.7803081327542016 0.7733678232322367 0.8737245187221899 0.7956052403997813 0.9650555911826408 0.8515726528325755 1.0 18.848642625363794 -9.753375253535506 5.859237808953395 1.0000000066729944 0.8655403640106488 0.28152398991585736 0.06457776507736881 5.967979337490703e-09 1.2628459461878858e-09 0.06620794362583074 0.01605778415218254 1.7645125291226914e-10 9.753375253535506 -0.13445964266234556 TEEEFKK ddPTM_KYSE-520_SHP099_60min_R1 8 TEEEFKK 7 1 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ;;;;;;; 107.9 0.0083203 16769660000.0 13109500.0 11551400.0 7461210.0 7712620.0 12685000.0 13062100.0 10254380.0 14873400.0 10801900.0 13329700.0 False True 12382289.901859654 10996453.40499512 7942171.534958089 8445625.085916242 13683237.332222918 12980574.588760016 11290992.803504577 14821807.64687766 8840547.253739655 13211609.228349663 0.9372279854667179 0.8323326261723492 0.6011509572895678 0.6392578632884097 1.0356980058766216 0.9825127555927184 0.8546266096999146 1.1218775389657158 0.6691499196607693 1.0 23.655302867689706 -5.7649157589090105 24.99998670037206 0.9475305710117081 0.747385132739061 0.3003137016948264 0.1430407285587598 112.25969927557088 807303.0347279916 0.043839039022397164 0.05170444545370653 1.7182416460852952e-06 5.7649157589090105 -0.20014543827264708 TEEGEIDYS(ph)AEEGENRR ddPTM_KYSE-520_SHP099_60min_R1 1 TEEGEIDYSAEEGENRR 17 1 B7WPG3;C9IYN3;V9GYK2;Q8WVV9-3;Q8WVV9-2;Q8WVV9-5;Q8WVV9-4;Q8WVV9 B7WPG3 HNRNPLL Heterogeneous nuclear ribonucleoprotein L-like 1 TEEGEIDYS(1)AEEGENRR 323.02 1.2588999999999998e-47 574750000.0 566520.0 566380.0 517950.0 497160.0 534150.0 477250.0 559040.0 558680.0 655490.0 510990.0 True False 535094.0062703785 539170.2546462885 551337.8857493013 544409.9369233956 576184.566102237 474271.3057231012 615553.2189046242 556742.0694768921 536469.5395582078 506463.026144204 1.0565312345585172 1.0645796964708176 1.0886044139228441 1.0749253327890258 1.1376636326028295 0.9364381627891293 1.2153961634493713 1.0992748547025668 1.0592471944940363 1.0 18.950097424716052 TEELIES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 TEELIESPK 9 0 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 TEELIES(1)PK;TEELIES(1)PK;TEELIES(1)PK 163.12 0.00012699 1210160000.0 2076010.0 1780830.0 1473470.0 1504650.0 1728020.0 1775500.0 1611220.0 1886570.0 1937030.0 1901520.0 True False 1960849.5868766676 1695276.253719672 1568452.2338353586 1647651.4836104827 1864005.3429111417 1764418.4459117167 1774097.8415918506 1880025.9289987476 1585314.1805526165 1884674.012160174 1.0404184353500914 0.8995063564210671 0.8322140718848409 0.8742368563367512 0.989033292168473 0.9361929089738851 0.9413287550765432 0.9975337468806613 0.8411609489619706 1.0 20.84588357466903 -5.7545796911356355 24.998786530832287 0.9495402188754559 0.9050605483490349 0.07568466719512024 0.06558219178054304 417.927526080879 1523046.3098040351 0.019655680194821813 0.024807110665919948 1.759625750556041e-06 5.7545796911356355 -0.04447967052642099 TEELIES(ph)PKLESSEGEIIQTVDR ddPTM_KYSE-520_SHP099_60min_R1 9 TEELIESPKLESSEGEIIQTVDR 23 1 F8VXG7;Q99590-2;Q99590;A0A0A0MTP7 F8VXG7 SCAF11 Protein SCAF11 1 T(0.013)EELIES(0.986)PKLESSEGEIIQTVDR;TEELIES(1)PKLESSEGEIIQTVDR;TEELIES(0.999)PKLES(0.001)SEGEIIQTVDR;TEELIES(1)PKLESSEGEIIQTVDR;TEELIES(1)PKLESSEGEIIQTVDR;TEELIES(0.998)PKLES(0.002)S(0.001)EGEIIQTVDR;TEELIES(1)PKLESSEGEIIQTVDR;TEELIES(0.998)PKLES(0.001)SEGEIIQTVDR;TEELIES(0.997)PKLES(0.001)S(0.001)EGEIIQTVDR 265.75 1.216e-37 15196290000.0 3388200.0 3713890.0 2732790.0 2510840.0 2579560.0 3090970.0 2485980.0 3411360.0 3989480.0 3350560.0 True False 3200249.791790751 3535469.149737463 2908950.016018601 2749469.4786884272 2782556.6963113104 3071678.109692893 2737287.1192267397 3399526.7883774103 3265090.998606659 3320876.6450962364 0.9636762017391978 1.064619233887565 0.8759584672661944 0.8279348414667627 0.837898240038565 0.9249600144674684 0.8242664247311767 1.023683548558575 0.9832015300622644 1.0 21.663132703844067 -7.285011323169756 24.726523310966506 1.0025819209735618 0.9034350351378848 0.3027068158379346 0.06922297428222335 1018.0063722186574 1067862.5834996104 0.04182824559357192 0.020112090028251196 5.187865126591732e-08 7.285011323169756 -0.09914688583567699 TEES(ph)PAS(ph)DEAGEK ddPTM_KYSE-520_SHP099_60min_R1 2 TEESPASDEAGEK 13 0 A6NEL0;P05114;A6NL93 A6NEL0 HMGN1 Non-histone chromosomal protein HMG-14 2 TEES(1)PAS(1)DEAGEK;TEES(1)PAS(1)DEAGEK 255.28 3.1915e-25 593210000.0 1829470.0 1562900.0 1329640.0 1744210.0 1731710.0 1601750.0 1780240.0 1920180.0 1656540.0 1725180.0 True False 1727985.6521419717 1487815.938039274 1415350.7218992203 1909979.1939841418 1867985.7249179143 1591752.884111006 1960204.0326680855 1913519.3437533798 1355754.093975123 1709896.247369731 1.0105792411674492 0.8701205937658061 0.8277407030259297 1.1170146708738562 1.0924555965260268 0.9309061216781659 1.146387703747168 1.119085059515672 0.7928867591005176 1.0 20.705477357624645 -5.259327804140577 24.994086726686003 1.0368767586955736 0.8995442224649596 0.21531601022283853 0.10896468145435914 269.0427921439666 3184559.609918278 0.02981069478158289 0.04857556316792865 5.5039210531167635e-06 5.259327804140577 -0.13733253623061403 TEES(ph)PAS(ph)DEAGEKEAK ddPTM_KYSE-520_SHP099_60min_R1 2 TEESPASDEAGEKEAK 16 1 A6NEL0;P05114;A6NL93 A6NEL0 HMGN1 Non-histone chromosomal protein HMG-14 2 T(0.022)EES(0.979)PAS(0.999)DEAGEKEAK;T(0.032)EES(0.968)PAS(1)DEAGEKEAK 137.27 1.833e-05 522660000.0 1519520.0 1552870.0 1387120.0 1331850.0 1406510.0 1266680.0 1319410.0 1343720.0 1785420.0 1342830.0 True False 1435229.196511977 1478267.7942946109 1476535.974670473 1458428.6235646948 1517194.3350528046 1258774.1802689119 1452788.8390006947 1339058.9489466061 1461232.734775536 1330933.5709059315 1.078362758206673 1.1106999076508324 1.1093987009925925 1.0957937010875611 1.1399474535908583 0.945782875859159 1.0915562359824011 1.0061050214813831 1.0979005764960255 1.0 20.344007135077185 -6.229714201025634 24.99984940028224 1.0326059185203877 1.106583326800373 0.4454911782317924 0.04369562914085228 638.4907776576367 503138.878526876 0.013439466496892125 0.013438279267217091 5.892312870342544e-07 6.229714201025634 0.07397740827998533 TEESEPLPSCPGS(ph)PPLPDDLLPLDCK ddPTM_KYSE-520_SHP099_60min_R1 8 TEESEPLPSCPGSPPLPDDLLPLDCK 26 0 O94864;O94864-2 O94864 SUPT7L STAGA complex 65 subunit gamma 1 TEESEPLPS(0.002)CPGS(0.998)PPLPDDLLPLDCK;TEESEPLPS(0.066)CPGS(0.934)PPLPDDLLPLDCK;TEESEPLPSCPGS(1)PPLPDDLLPLDCK;TEESEPLPSCPGS(1)PPLPDDLLPLDCK;TEESEPLPSCPGS(1)PPLPDDLLPLDCK;TEESEPLPSCPGS(1)PPLPDDLLPLDCK;T(0.001)EES(0.001)EPLPS(0.02)CPGS(0.979)PPLPDDLLPLDCK;TEESEPLPS(0.029)CPGS(0.971)PPLPDDLLPLDCK 211.19 1.3575999999999998e-21 921391000.0 1646843.0 1972135.0 1259142.0 1258827.0 1353545.0 2038037.0 1469451.0 1965217.0 2024246.0 2017815.0 True False 1555489.3358898717 1877390.6743650148 1340308.3080184313 1378465.5395998603 1460061.2908824345 2025316.8551115596 1617997.4475397419 1958400.1209120958 1656693.9534890591 1999938.7289363127 0.7777684952964404 0.9387240954944273 0.6701746851671239 0.6892538854592865 0.7300530110034834 1.0126894518357292 0.809023508635332 0.9792300596897238 0.8283723543721703 1.0 20.931524370917284 -6.246162219660068 24.68731212786401 0.9172624837590019 0.7620041692268502 0.44048468100030325 0.09253837451074858 722.7560836742076 1167946.8446514737 0.03096862024659489 0.030853898749927135 5.673326531404072e-07 6.246162219660068 -0.15525831453215166 TEESEPLPSCPGS(ph)PPLPDDLLPLDCKNPNAPFQIR ddPTM_KYSE-520_SHP099_60min_R1 2 TEESEPLPSCPGSPPLPDDLLPLDCKNPNAPFQIR 35 1 O94864;O94864-2 O94864 SUPT7L STAGA complex 65 subunit gamma 1 TEESEPLPS(0.034)CPGS(0.965)PPLPDDLLPLDCKNPNAPFQIR;TEESEPLPSCPGS(1)PPLPDDLLPLDCKNPNAPFQIR 225.58 5.1837e-23 120429000.0 226559.0 273944.0 199842.0 139800.0 164759.0 205302.0 131110.0 166667.0 299809.0 206923.0 True False 213991.32063583072 260783.31904167292 212724.13507850544 153086.54996759736 177724.59594952443 204020.63406508983 144363.87831029118 166088.87107737007 245371.24316985282 205089.82320365816 1.0434029211841156 1.2715566036775507 1.0372242354866446 0.7464365982488533 0.8665695507135938 0.9947867274842468 0.703905615867322 0.8098347762113999 1.1964086727316277 1.0 17.645896379819288 -5.010205132270765 9.096180337771708 0.8888376714380773 1.157074432914614 0.33874950974291096 0.14332785832751613 0.16691845188484783 125.99444449370888 0.037668258559892115 0.07123264009838809 9.76775747086709e-06 5.010205132270765 0.26823676147653674 TEESPAS(ph)DEAGEK ddPTM_KYSE-520_SHP099_60min_R1 4 TEESPASDEAGEK 13 0 A6NEL0;P05114;A6NL93 A6NEL0 HMGN1 Non-histone chromosomal protein HMG-14 1 TEESPAS(1)DEAGEK;TEESPAS(1)DEAGEK;TEESPAS(1)DEAGEK;TEES(0.005)PAS(0.995)DEAGEK 225.21 1.111e-17 2984360000.0 6507119.0 5578815.0 5426655.0 5093950.0 5621927.0 5286295.0 5556376.0 6156113.0 6795049.0 5806032.0 True False 6146156.137449875 5310800.3534279615 5776465.86425499 5578077.476448092 6064340.670510999 5253301.272053429 6118068.711084002 6134758.880850574 5561239.390845715 5754595.073504543 1.0680432000764342 0.9228799395252131 1.0038005785760922 0.9693258005469093 1.053825784968363 0.9128880842095765 1.0631623307872649 1.066062651236121 0.9663997761460088 1.0 22.456282984910217 TEESPASDEAGEKEAKS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 4 TEESPASDEAGEKEAKSD 18 2 A6NEL0;P05114;A6NL93 A6NEL0 HMGN1 Non-histone chromosomal protein HMG-14 1 TEESPASDEAGEKEAKS(1)D;TEESPASDEAGEKEAKS(1)D;TEESPASDEAGEKEAKS(1)D;TEESPASDEAGEKEAKS(1)D 178.35 4.7975000000000004e-09 3401910000.0 3934700.0 4316980.0 4005040.0 3348680.0 3732110.0 3421300.0 3374180.0 3445060.0 5080510.0 3646370.0 True False 3716434.34737001 4109585.800880915 4263211.2866905695 3666937.540382643 4025805.8241988556 3399946.397633207 3715275.0432233866 3433109.8909430485 4158017.453234787 3614065.998632933 1.0283249804446846 1.1371086755016147 1.1796163347053386 1.0146293791451815 1.1139270355664972 0.940753821020225 1.0280042048564517 0.9499300489370328 1.150509552068947 1.0 21.78519142168912 -5.78352729560252 1.7126904168548134 1.0154127504200978 1.1101206838212634 0.20031467271071846 0.07212310154120413 0.517258239938174 3.139606735341543 0.02512449746258182 0.03290490320470022 1.6461625010271197e-06 5.78352729560252 0.09470793340116557 TEETATEMLTSELQTQAHVIK ddPTM_KYSE-520_SHP099_60min_R1 2 TEETATEMLTSELQTQAHVIK 21 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 0 ; 202.81 4.715600000000001e-13 195200000.0 120855.0 120824.0 90632.0 121457.0 118494.0 98191.0 87218.0 129744.0 120924.0 85075.0 False True 114150.93223153045 115019.43367947849 96474.28373632715 133000.2367626214 127818.8036613655 97578.15354689793 96034.84660565162 129293.94834647732 98967.24984597272 84321.30168734842 1.3537615044747071 1.3640614100806276 1.1441270687926557 1.5773029365197382 1.5158542515780855 1.15721830183201 1.1389156083208416 1.5333485816654158 1.17369214973613 1.0 16.363609517911996 -6.274798828436951 24.805033964559335 1.2301117587110986 1.3861562796839768 0.23842701141535072 0.16588903899932486 1356.3458982170887 2518375.391621204 0.05984205476557986 0.05307763917848104 5.311304146430286e-07 6.274798828436951 0.15604452097287824 TEFLDLDNS(ph)PLSPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 TEFLDLDNSPLSPPSPR 17 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 2 TEFLDLDNS(1)PLS(0.004)PPS(0.996)PR 96.15299999999999 0.0012947000000000002 167010000.0 269240.0 230330.0 231990.0 238870.0 236630.0 248090.0 221470.0 229500.0 267360.0 254430.0 True False 254304.72048336617 219264.60106762155 246944.44659712396 261572.13298111575 255251.4347594722 246541.578285687 243858.34893890758 228703.91806570257 218814.16359712934 252175.94814354455 1.0084416152908042 0.8694905389740457 0.9792545578397401 1.0372604322765258 1.0121957967782758 0.9776569894974665 0.9670166831298979 0.9069220111964003 0.8677043358337058 1.0 17.944071156333113 -9.525185324260178 5.4508393760220155 0.9999999953616316 0.959636055965131 0.04695786679574998 0.05593799428259288 25373688.03071111 1.945078949556823 0.13235389340268752 0.014440993268737183 2.9841089536532164e-10 9.525185324260178 -0.040363939396500625 TEFLDLDNSPLS(ph)PPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 TEFLDLDNSPLSPPSPR 17 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 2 TEFLDLDNS(0.119)PLS(0.881)PPS(1)PR;TEFLDLDNSPLS(1)PPS(1)PR;TEFLDLDNS(0.001)PLS(0.999)PPS(1)PR 291.28 1.3190999999999998e-35 378320000.0 643910.0 650520.0 570270.0 586300.0 653270.0 596370.0 585260.0 568420.0 687860.0 627080.0 True False 608191.028697238 619268.0427495727 607030.5166642616 642021.7757224767 704678.6324021487 592647.8336177802 644423.7923871636 566448.283690225 562961.9635395033 621524.5590608572 0.9785470579251662 0.9963693851218137 0.9766798557107759 1.0329789327916366 1.1337904868424507 0.9535388827004511 1.0368436500094347 0.9113851985931913 0.9057758946648162 1.0 19.24545187381639 -7.261708001444103 24.999998920257273 0.9314354066680961 1.0161385508113863 0.3049469586791006 0.05253137332519985 28.502437627142733 2652327.720007086 0.027177794271036296 0.01429878082930527 5.4738387357796734e-08 7.261708001444103 0.08470314414329017 TEFLDLDNSPLSPPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 12 TEFLDLDNSPLSPPSPR 17 0 Q8NCF5 Q8NCF5 NFATC2IP NFATC2-interacting protein 1 TEFLDLDNSPLS(0.001)PPS(0.999)PR;TEFLDLDNSPLSPPS(1)PR;TEFLDLDNSPLS(0.43)PPS(0.57)PR;TEFLDLDNSPLSPPS(1)PR;TEFLDLDNSPLS(0.001)PPS(0.999)PR;TEFLDLDNSPLS(0.001)PPS(0.999)PR;TEFLDLDNSPLS(0.02)PPS(0.98)PR;TEFLDLDNSPLSPPS(1)PR;TEFLDLDNSPLS(0.001)PPS(0.999)PR;TEFLDLDNSPLSPPS(1)PR;TEFLDLDNSPLS(0.002)PPS(0.998)PR;TEFLDLDNSPLS(0.004)PPS(0.996)PR 231.55 2.1845e-19 7548870000.0 6473518.0 7714613.0 5400699.0 5253954.0 5021108.0 7223511.0 5607247.0 6788761.0 8240372.0 8017809.0 True False 6114419.051901806 7343991.411609804 5748836.698963925 5753288.2085011285 5416240.633403485 7178426.388423641 6174082.248217106 6765212.372599734 6744128.167673568 7946777.45002102 0.7694212012802287 0.9241471096677533 0.7234173518913278 0.723977517262159 0.6815644036173629 0.9033128753850598 0.7769290491708403 0.851315192245863 0.8486620155262722 1.0 22.92193851155747 -8.29753772724723 0.6641845477099763 1.0020507326466854 0.7802925657992251 0.44607479543887885 0.0722030781409912 1.157851758362555 1.0331428576979518 0.08045962499226242 0.029963183382637818 5.0403683142189815e-09 8.29753772724723 -0.2217581668474603 TEFLHSQNSLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 TEFLHSQNSLSPR 13 0 Q96FS4;F6RY50 Q96FS4 SIPA1 Signal-induced proliferation-associated protein 1 1 TEFLHSQNSLS(1)PR;TEFLHSQNS(0.005)LS(0.995)PR;TEFLHSQNS(0.002)LS(0.998)PR;TEFLHSQNSLS(1)PR;TEFLHSQNSLS(1)PR;TEFLHSQNS(0.012)LS(0.988)PR;TEFLHSQNSLS(1)PR;TEFLHSQNS(0.149)LS(0.851)PR 251.02 1.7215e-16 4579850000.0 3008551.0 3364580.0 3071400.0 4009290.0 3118150.0 3140180.0 2974730.0 3068250.0 3926040.0 3059970.0 True False 2841660.6786322678 3202940.526462459 3269387.3584137564 4390331.716163004 3363530.6651533977 3120580.97182937 3275444.738967068 3057606.9568849346 3213170.103414398 3032861.0464206384 0.9369570960021317 1.056078889681592 1.0779878498793292 1.447587492128742 1.1090289379142553 1.0289231600347328 1.07998509949301 1.0081592628496783 1.0594518028468727 1.0 21.532247970276003 -6.17360345924496 5.52623555446003 1.0388585050466257 1.138338820314705 0.11601822006252838 0.12315985956726562 0.5391465314893731 26.385803551483747 0.044162788130008825 0.044122487082314026 6.704965394985939e-07 6.17360345924496 0.09948031526807921 TEHAEFLHCK ddPTM_KYSE-520_SHP099_60min_R1 1 TEHAEFLHCK 10 0 P50570-3;P50570-2;P50570-5;P50570-4;P50570 P50570-3 DNM2 Dynamin-2 0 143.89 0.00023567 554200000.0 863840.0 771220.0 460050.0 407420.0 693790.0 655930.0 489940.0 539830.0 491270.0 459230.0 False True 815921.0731776521 734169.4335751797 489705.5591060253 446141.0743047103 748387.3258748872 651836.0975651201 539467.9165536127 537957.4557272688 402067.7519088939 455161.57947553316 1.792596541469536 1.612986391384654 1.0758938829377822 0.9801817517611727 1.6442234134463367 1.4320982414996628 1.1852228766215787 1.181904360968117 0.8833516931991109 1.0 18.796019258268792 -4.634127487443756 4.649146292378378 1.2000068427526471 1.7513914390633063 0.49700283030332104 0.21456778028676168 0.17885213589368953 6.294412006343589 0.058914123655804895 0.16913488282840303 2.3220550554412235e-05 4.634127487443756 0.5513845963106592 TEHQVPSSVS(ph)SPDDAMVSPLKPAPK ddPTM_KYSE-520_SHP099_60min_R1 2 TEHQVPSSVSSPDDAMVSPLKPAPK 25 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 TEHQVPS(0.002)S(0.011)VS(0.493)S(0.493)PDDAMVSPLKPAPK;TEHQVPS(0.001)S(0.001)VS(0.499)S(0.499)PDDAMVSPLKPAPK 139.85 1.0865e-06 2184700000.0 768010.0 859730.0 719520.0 1189330.0 900390.0 896410.0 875740.0 904550.0 994200.0 940630.0 True False 725406.9543100218 818427.2803189616 765901.4104727041 1302363.565614896 971245.5704816859 890815.1726835944 964268.3455987673 901412.327173558 813678.3417424669 932296.7499990665 0.7780858984124402 0.877861346529183 0.8215210559014294 1.3969410122004609 1.0417772779779169 0.9555060367683212 1.0342933680716282 0.9668727550261873 0.8727675407463146 1.0 19.830429712159244 TEHQVPSSVSS(ph)PDDAMVSPLKPAPK ddPTM_KYSE-520_SHP099_60min_R1 2 TEHQVPSSVSSPDDAMVSPLKPAPK 25 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 TEHQVPSSVS(0.214)S(0.785)PDDAMVSPLKPAPK;TEHQVPSS(0.001)VS(0.118)S(0.882)PDDAMVSPLKPAPK 237.5 9.383700000000001e-29 1523970000.0 450910.0 513630.0 409010.0 658220.0 473160.0 495070.0 501280.0 466410.0 615430.0 471950.0 True False 425897.12343319954 488954.4438256526 435375.43903913803 720777.0308989404 510395.00008786726 491980.08449310757 551954.2744213465 464792.1325709127 503683.4257277879 467768.8901715443 0.9104862088562812 1.0452906426640278 0.9307490262541259 1.5408827864431318 1.0911264319024951 1.0517588809992993 1.1799721743336309 0.993636264268152 1.0767783756270597 1.0 18.835436390236424 -9.977928996233722 13.544465120181044 1.0000000019772683 1.0969252567124355 0.024837178167614993 0.1679831571543988 0.0 0.0 0.16484182464291028 0.039980014971897855 1.0521338754588663e-10 9.977928996233722 0.09692525473516711 TEHQVPSSVSSPDDAMVS(ph)PLKPAPK ddPTM_KYSE-520_SHP099_60min_R1 2 TEHQVPSSVSSPDDAMVSPLKPAPK 25 1 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 TEHQVPSSVSSPDDAMVS(1)PLKPAPK;TEHQVPSSVSSPDDAMVS(1)PLKPAPK 182.74 5.1907e-12 2601990000.0 1309961.0 1515620.0 1136670.0 1496800.0 1076905.0 1297367.0 1060357.0 1280390.0 1809290.0 1370840.0 True False 1237294.8519874886 1442807.3402079986 1209941.5669363043 1639055.4219706708 1161651.29674872 1289269.651319148 1167548.2336470569 1275948.625935274 1480768.5444892654 1358695.4240973813 0.910649163928301 1.0619063806492872 0.8905171427511812 1.2063449930727046 0.8549754979269448 0.9489026226577935 0.8593156442126765 0.9390983463294739 1.0898458316903368 1.0 20.373790655752195 -3.97093150066522 17.289182908240512 0.977189222133222 0.6989841056177858 0.038105727386330224 0.10559104043877979 27323874.15102059 420932221.31203306 0.02563364014183173 224277668.01593533 0.00010692235097867347 3.97093150066522 -0.2782051165154362 TEIMS(ph)PLYQDEAPK ddPTM_KYSE-520_SHP099_60min_R1 11 TEIMSPLYQDEAPK 14 0 Q8IY81 Q8IY81 FTSJ3 pre-rRNA processing protein FTSJ3 1 TEIMS(0.993)PLY(0.007)QDEAPK;TEIMS(0.955)PLY(0.044)QDEAPK;TEIMS(1)PLYQDEAPK;T(0.001)EIMS(0.999)PLYQDEAPK;TEIMS(1)PLYQDEAPK;TEIMS(1)PLYQDEAPK;TEIMS(1)PLYQDEAPK;TEIMS(1)PLYQDEAPK;TEIMS(1)PLYQDEAPK;TEIMS(1)PLYQDEAPK;TEIMS(1)PLYQDEAPK 279.91 8.658099999999999e-26 15675910000.0 11137830.0 11585030.0 8522690.0 7737510.0 8144540.0 11230450.0 8719380.0 11589640.0 12700010.0 11178250.0 True False 10519992.367186345 11028467.769315448 9072076.234186139 8472880.62403279 8785468.961906401 11160356.595826095 9600820.023348233 11549438.2438823 10394008.3251989 11079219.4015469 0.9495246899540166 0.9954192050547924 0.8188371315148322 0.7647542951310985 0.7929682266856959 1.0073233674087063 0.8665610523073268 1.0424415137288237 0.9381534879386603 1.0 23.40135290253105 -6.271926731278857 24.945851405981223 0.9670275521141294 0.8635289584188439 0.31766670075859815 0.07800535248967652 998.9418240246537 2376137.0703173755 0.029897188283549304 0.02664802261053588 5.346545520028406e-07 6.271926731278857 -0.10349859369528547 TEKPERPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 TEKPERPSR 9 2 Q02241-2;Q02241-3;Q02241;H7BYN4 Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 TEKPERPS(1)R;TEKPERPS(1)R;TEKPERPS(1)R;TEKPERPS(1)R 101.38 0.0017312999999999999 7991800000.0 2904720.0 2898830.0 2786700.0 3130870.0 3064470.0 2835140.0 2870160.0 3168470.0 3802830.0 2725610.0 True False 2743589.391184235 2759565.8555674613 2966335.140877651 3428426.9434696124 3305626.354550817 2817444.839618217 3160303.7828622162 3157479.317096461 3112331.933543054 2701463.2158924937 1.0155938363491002 1.021507840392997 1.0980475778559327 1.2690999911827223 1.2236429262127575 1.0429328902364514 1.1698489042050988 1.168803372380294 1.1520911760831878 1.0 21.365309607161894 -4.91008065423402 4.124822569533797 1.1553993839817511 1.0197677935103902 0.31151101010233995 0.07428211438041894 0.23512447580066134 7.432674190015097 0.01975337943936415 0.044239568907116444 1.2300403148309538e-05 4.91008065423402 -0.13563159047136097 TEKPERPSR ddPTM_KYSE-520_SHP099_60min_R1 2 TEKPERPSR 9 2 Q02241-2;Q02241-3;Q02241;H7BYN4 Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 0 ; 127.76 0.00041218 1036390000.0 997420.0 923970.0 751810.0 723530.0 1093940.0 981060.0 731810.0 1004580.0 919730.0 819810.0 False True 942091.1242925256 879581.094292755 800272.8755385312 792294.0736627739 1180026.8543328298 974936.8406342714 805788.4965773334 1001095.3464507335 752730.2165065376 812547.1212025287 1.1594295268664274 1.0824985669643619 0.9848941121767409 0.9750746178144336 1.4522565197036814 1.199852679548497 0.991682175163955 1.232045896574174 0.9263834636353581 1.0 19.632091954608626 -7.775572886039371 24.996715426319323 0.9631916256762677 1.1306487035874675 0.19885241836006062 0.13752020827245862 473.3443474019531 837138.0915635189 0.13605274275906445 0.03580470028190832 1.6765909360697218e-08 7.775572886039371 0.1674570779111998 TELNLS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 4 TELNLSK 7 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 TELNLS(1)K;TELNLS(1)K;TELNLS(1)K;TELNLS(1)K 102.52 0.0046332 3631640000.0 5104430.0 4495610.0 3966590.0 3966790.0 4411240.0 3860580.0 4088500.0 4122570.0 5046750.0 4028770.0 True False 4821277.092471068 4279634.147551815 4222282.738168393 4343792.5289410995 4758379.491477726 3836484.6882105567 4501805.4799147695 4108269.76688507 4130387.418214439 3993078.2321356284 1.2074086236703887 1.0717631608391822 1.0574004546638143 1.0878305598881035 1.1916569660927454 0.9607837525784412 1.1274022741866134 1.0288478031365376 1.0343868008830304 1.0 21.92906990676182 -1.000000000745256 0.12975130137314755 0.9779260755752089 1.5330722018171237 0.31583235383285013 0.06233342219419057 113.29817099198031 0.9973745129951751 0.3334354309843159 11.50375060735802 0.09999999982839845 1.000000000745256 0.5551461262419147 TEMDKS(ph)PFNSPS(ph)PQDSPR ddPTM_KYSE-520_SHP099_60min_R1 4 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 2 TEMDKS(1)PFNS(0.005)PS(0.995)PQDSPR;TEMDKS(1)PFNS(0.002)PS(0.998)PQDSPR;TEMDKS(1)PFNS(0.02)PS(0.98)PQDSPR;T(0.03)EMDKS(0.969)PFNS(0.086)PS(0.89)PQDS(0.024)PR 174.7 7.3301000000000006e-09 3193860000.0 3052000.0 2876830.0 2508250.0 2539070.0 2868310.0 2550360.0 2524740.0 2800880.0 3231590.0 2615400.0 True False 2882699.4759888332 2738622.768590133 2669935.808341897 2780382.449400771 3094029.6785485432 2534442.2572319927 2779965.358287888 2791164.4010103038 2644814.717754517 2592229.590750408 1.112054073556941 1.0564738472094004 1.0299765953867515 1.0725834082450605 1.1935785663386678 0.9777074786413164 1.0724225077158902 1.0767427433780306 1.0202856750002947 1.0 21.30576207102214 -7.867557081629392 3.7267596979247943 1.0008582093053098 1.072681580086269 0.19590481243886526 0.05228307755579545 0.3662207639591657 8.959901336422108 0.04968491579720701 0.01326064350794161 1.3565722170933647e-08 7.867557081629392 0.07182337078095924 TEMDKSPFNSPS(ph)PQDSPR ddPTM_KYSE-520_SHP099_60min_R1 6 TEMDKSPFNSPSPQDSPR 18 1 A0A286YEX4;P08651-5;P08651-3;P08651-6;P08651-2;P08651;P08651-4 A0A286YEX4 NFIC Nuclear factor 1 C-type 1 TEMDKS(0.004)PFNS(0.228)PS(0.766)PQDS(0.002)PR;TEMDKSPFNS(0.01)PS(0.987)PQDS(0.002)PR;TEMDKSPFNS(0.057)PS(0.943)PQDSPR;TEMDKSPFNS(0.003)PS(0.997)PQDSPR;TEMDKSPFNS(0.007)PS(0.993)PQDSPR;TEMDKSPFNS(0.04)PS(0.96)PQDSPR 220.88 1.3794999999999999e-18 5810600000.0 4479540.0 4485670.0 4154770.0 3564220.0 3949310.0 3947180.0 3414270.0 3899880.0 5358490.0 3721680.0 True False 4231050.986458395 4270171.680072063 4422593.122067041 3902962.3971781847 4260098.228499901 3922544.185487926 3759417.73166408 3886352.2265188377 4385523.292540329 3688708.810623228 1.1470276467129252 1.1576331717413588 1.1989542544888 1.058083626969394 1.1549022834849718 1.0633922022229751 1.019169016767389 1.0535806500438338 1.1889047137335218 1.0 21.814684475448043 -5.627238970800941 1.1702698551367323 1.0690988513112596 1.1653840169479064 0.3131941904964979 0.05733012796109893 0.6130628652014092 1.7492717728254903 0.0228922446982344 0.039118803131636445 2.35917973588948e-06 5.627238970800941 0.0962851656366468 TEMDWVLK ddPTM_KYSE-520_SHP099_60min_R1 2 TEMDWVLK 8 0 P52597;A0A1B0GW42 P52597 HNRNPF Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed 0 ; 172.15 0.0008492 1099860000.0 1071610.0 1200410.0 700930.0 619350.0 1145990.0 1191710.0 854360.0 900290.0 930670.0 940170.0 False True 1012165.657098427 1142740.5017478564 746113.0693276525 678212.8377856333 1236172.893208839 1184272.09584762 940727.046550076 897167.1041192663 761683.788281495 931840.8252411919 1.0862001638922014 1.2263258603765042 0.8006872516392842 0.7278204811536229 1.3265923317846433 1.2708952685573636 1.0095362008920183 0.9627900815432175 0.8173968854437618 1.0 19.82972401274193 -7.270928794376616 3.2665783785266727 0.9093458819628095 1.0671775553204492 0.10935765218587223 0.18448042660399794 0.6330420017698881 14.049890672902059 0.1200931459128442 0.05594184256612007 5.358845123316468e-08 7.270928794376616 0.1578316733576397 TENNDHINLK ddPTM_KYSE-520_SHP099_60min_R1 6 TENNDHINLK 10 0 P61956-2;P61956 P61956-2 SUMO2 Small ubiquitin-related modifier 2 0 ;;;;; 159.09 0.00013696 6655390000.0 10430280.0 10623230.0 6997510.0 6659190.0 10285950.0 10549440.0 7445160.0 9528540.0 8987800.0 9100270.0 False True 9851691.576152302 10112874.085006678 7448580.691011856 7292077.415441517 11095395.745950192 10483597.031843932 8197789.430559435 9495487.71871796 7355842.084000148 9019648.68770292 1.092247815547823 1.1212048756171873 0.8258171630528134 0.8084657915095169 1.2301361316962682 1.1623065814233884 0.9088812341145859 1.0527558275815978 0.815535320575052 1.0 23.104639811410237 -7.740513500566898 24.987280198650783 0.9077675328846259 1.0220752787063294 0.10248708271471696 0.13878727931117732 531.1759274964943 634273.3669560219 0.09955562295205142 0.03754477812594428 1.8175505544698193e-08 7.740513500566898 0.11430774582170355 TEPEGLRPAS(ph)PLALTQEQLADLKEDLDRDDCK ddPTM_KYSE-520_SHP099_60min_R1 1 TEPEGLRPASPLALTQEQLADLKEDLDRDDCK 32 3 P10070-4;P10070-2 P10070-4 GLI2 Zinc finger protein GLI2 1 TEPEGLRPAS(1)PLALTQEQLADLKEDLDRDDCK 205.28 2.1606e-16 188530000.0 181500.0 196380.0 157370.0 139390.0 173820.0 187970.0 160590.0 176030.0 185890.0 157370.0 True False 171431.83318872034 186945.6100276103 167514.3220009028 152637.5836908684 187498.6450994867 186796.80950606862 176824.00440736525 175419.39301571102 152137.0619055596 155975.82423200744 1.0990923371158003 1.1985550385650574 1.0739761935909524 0.9785977053971291 1.202100684658607 1.197601041224288 1.1336628947339111 1.1246575799771514 0.9753887351110397 1.0 17.250962907604695 -7.757698195568129 24.463842701355862 0.9876943138769064 1.1269741511587594 0.42326852871893195 0.06458381504320591 68.29377085448948 446609.240890397 0.05068722764249507 0.017468008436960412 1.747035799433893e-08 7.757698195568129 0.139279837281853 TEPS(ph)SPLSDPSDIIR ddPTM_KYSE-520_SHP099_60min_R1 3 TEPSSPLSDPSDIIR 15 0 Q9ULJ3;Q9ULJ3-2 Q9ULJ3 ZBTB21 Zinc finger and BTB domain-containing protein 21 1 TEPS(0.591)S(0.408)PLSDPSDIIR;TEPS(0.5)S(0.5)PLSDPSDIIR;T(0.004)EPS(0.497)S(0.497)PLS(0.003)DPSDIIR 102.33 0.0010918 1640870000.0 1181730.0 1254400.0 1000770.0 960400.0 1040170.0 1271700.0 971180.0 1370490.0 1485040.0 1335100.0 True False 1116177.0811796477 1194136.7411072147 1065281.2354886152 1051676.1272452115 1122025.4612422793 1263762.8485868361 1069356.352203405 1365736.0900647722 1215394.1708119418 1323272.0526920832 0.8434978120401481 0.9024121220408503 0.8050356941502635 0.7947542798214977 0.8479174474815023 0.9550287456126798 0.8081152700443507 1.0320901792539936 0.9184764148379971 1.0 20.335678266406276 -7.113085041785763 0.9396703981541346 0.9917098088157225 0.8409901129878442 0.4684229500457755 0.05851269639775037 0.5079007409371047 0.8137003194547806 0.04951353762291646 0.02211298471660928 7.707525286494326e-08 7.113085041785763 -0.15071969582787825 TEPTS(ph)PTPSAFK ddPTM_KYSE-520_SHP099_60min_R1 4 TEPTSPTPSAFK 12 0 Q86XN7-2;Q86XN7 Q86XN7-2 PROSER1 Proline and serine-rich protein 1 1 TEPT(0.009)S(0.869)PT(0.113)PS(0.009)AFK;TEPT(0.004)S(0.921)PT(0.05)PS(0.025)AFK;TEPT(0.294)S(0.697)PT(0.009)PSAFK;TEPT(0.002)S(0.996)PT(0.002)PSAFK 159.36 3.9467e-06 3275520000.0 9240490.0 10204870.0 7770620.0 7067460.0 7633510.0 11165330.0 8987720.0 12076310.0 13443030.0 12772900.0 True False 8727901.599239876 9714612.727377845 8271526.598631588 7739149.27349067 8234223.8082693685 11095643.033901127 9896286.449294256 12034420.099241946 11002114.62320886 12659742.04316583 0.6894217567372553 0.7673626124650882 0.6533724439588282 0.6113196656853314 0.6504258759928279 0.8764509573787833 0.7817131198685534 0.9506054750727362 0.8690630966804086 1.0 23.593744672703153 -6.69721338557462 1.188264491192637 0.9346504452430784 0.6757820801330113 0.7367137930851482 0.06573832252315308 0.26032236077088905 0.7419694915222982 0.04358754637036455 0.026387537676361806 2.0081059105452934e-07 6.69721338557462 -0.25886836511006706 TES(ph)GEETDLISPPQEEVK ddPTM_KYSE-520_SHP099_60min_R1 4 TESGEETDLISPPQEEVK 18 0 A0A5F9UY30;A0A5H1ZRP2;O43493;O43493-5;O43493-3;O43493-7 A0A5F9UY30 TGOLN2 Trans-Golgi network integral membrane protein 2 1 T(0.017)ES(0.983)GEETDLISPPQEEVK;T(0.017)ES(0.983)GEETDLISPPQEEVK;T(0.134)ES(0.866)GEETDLISPPQEEVK;T(0.026)ES(0.974)GEETDLISPPQEEVK 264.38 8.0668e-29 0.0 746980.0 811310.0 639072.0 764180.0 879220.0 1102780.0 955860.0 1187830.0 1481470.0 1123320.0 True False 705543.5303322867 772333.4497988624 680267.6036713541 836807.4374409047 948409.6119225093 1095897.1409645283 1052487.6570946134 1183709.6949716057 1212472.3928195657 1113368.2587297347 0.6337018545303745 0.6936909182951146 0.6109996385629727 0.7515998690277338 0.8518381986249274 0.9843078715167077 0.9453185402423981 1.0631789488251848 1.0890128969572934 1.0 20.08649942810404 -5.97074057810809 1.0629669039164211 1.0420777217090267 0.6377916000457009 0.9439463476598633 0.04022717779340746 0.10756943212054597 0.2599073433231714 0.019663541453202878 0.023772795968730227 1.06969366027913e-06 5.97074057810809 -0.4042861216633258 TES(ph)PATAAETASEELDNR ddPTM_KYSE-520_SHP099_60min_R1 9 TESPATAAETASEELDNR 18 0 C9JWF0;C9IYK2;C9JJ64;C9JR83;Q9NTJ3-2;Q9NTJ3 C9JWF0 SMC4 Structural maintenance of chromosomes protein 4 1 T(0.184)ES(0.71)PAT(0.105)AAET(0.001)AS(0.001)EELDNR;T(0.003)ES(0.995)PAT(0.001)AAETASEELDNR;T(0.001)ES(0.999)PATAAETASEELDNR;TES(1)PATAAETASEELDNR;T(0.021)ES(0.979)PATAAETASEELDNR;TES(1)PATAAETASEELDNR;TES(1)PATAAETASEELDNR;T(0.001)ES(0.997)PAT(0.002)AAETASEELDNR;TES(1)PATAAETASEELDNR 376.33 6.048999999999999e-73 12768350000.0 3334610.0 3864790.0 2957980.0 2561752.0 2682170.0 3617800.0 2744320.0 3403550.0 4294390.0 3439030.0 True False 3149632.53591977 3679119.687231938 3148656.123735341 2805220.1398611763 2893241.519540273 3595219.9682452325 3021742.647582172 3391743.8794445423 3514637.0287622544 3408562.8697248553 0.9240353357994577 1.0793756277492168 0.9237488771886744 0.822992048871206 0.8488156534351441 1.054761230951109 0.8865151569952096 0.9950656652310272 1.0311199068614985 1.0 21.700732162607565 -7.457666868123816 7.229215460810775 1.0148964943563028 0.9366457969509103 0.1691311846040956 0.07634269512890604 0.4967828351185061 48.16916137966509 0.045222611600185265 0.02129378661023433 3.486046147265945e-08 7.457666868123816 -0.07825069740539248 TESEVPPRPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 TESEVPPRPASPK 13 1 Q9Y3L3;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;A0A3B3IU28 Q9Y3L3 SH3BP1 SH3 domain-binding protein 1 1 TES(0.011)EVPPRPAS(0.989)PK;TESEVPPRPAS(1)PK;TESEVPPRPAS(1)PK;TESEVPPRPAS(1)PK;TES(0.01)EVPPRPAS(0.99)PK;TESEVPPRPAS(1)PK 172.85 3.0538e-06 2015110000.0 2968820.0 2552720.0 2386550.0 2090530.0 2266860.0 2325040.0 2215680.0 2384360.0 2914210.0 2326660.0 True False 2804133.6364040547 2430083.499489164 2540390.831615014 2289213.3426592383 2445248.985330932 2310528.5629302044 2439662.5573529536 2376089.211673806 2385062.925255802 2306047.6025140886 1.215991219499088 1.0537872231431171 1.1016211585768831 0.9926999512774596 1.0603636207097735 1.0019431343963718 1.05794110871484 1.030373010983536 1.0342643936125038 1.0 21.136990863407608 -1.0000000000000338 0.9382778790954993 1.030210484524186 120.04335005403243 0.7670643968397266 0.03009728083756621 519.5555741438236 0.939600869609697 0.008923963686745346 132653.67732209442 0.09999999999999223 1.0000000000000338 119.01313956950824 TESS(ph)TEGKEQEEK ddPTM_KYSE-520_SHP099_60min_R1 2 TESSTEGKEQEEK 13 1 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 TES(0.07)S(0.861)T(0.07)EGKEQEEK;T(0.002)ES(0.036)S(0.916)T(0.045)EGKEQEEK 208.39 1.613e-09 292830000.0 616020.0 600870.0 592230.0 537370.0 543680.0 556410.0 548930.0 551070.0 681490.0 561470.0 True False 581848.142594575 572003.3032757422 630406.0934015039 588441.4832338176 586464.5228839532 552937.2388001902 604421.2014405321 549158.4667907051 557748.5949648698 556495.8126170504 1.0455570902830327 1.0278663204773533 1.132813723138137 1.057405051201617 1.053852535072938 0.9936053897690169 1.0861199450865615 0.9868150924769052 1.0022511981571396 1.0 19.08601130640774 -6.926593478168821 0.763210207288096 0.9940415814832295 1.0658579820108012 0.3269576076356018 0.03613602223059047 0.8150473500836671 0.9058411977222792 0.0319180876694795 0.017631058485296943 1.1841494615320763e-07 6.926593478168821 0.07181640052757166 TESSTEGKEQEEKS(ph)GEDGEKDTK ddPTM_KYSE-520_SHP099_60min_R1 1 TESSTEGKEQEEKSGEDGEKDTK 23 3 D6REM6;A0A0R4J2E8;A8MXP9;P43243;B3KM87;P43243-2 D6REM6 MATR3 Matrin-3 1 TESSTEGKEQEEKS(1)GEDGEKDTK 239.15 3.7123999999999998e-28 779800000.0 184340.0 189100.0 167390.0 167080.0 173820.0 165710.0 132920.0 152280.0 235730.0 145520.0 True False 174114.2927273207 180015.3521551131 178180.22723346952 182959.23296556628 187498.6450994867 164675.74242299664 146356.85077418888 151751.77622241928 192927.37426971635 144230.8060128467 1.2071921217150534 1.2481061233137603 1.2353825937684833 1.2685170250609985 1.2999902744964629 1.1417515229605588 1.0147405732527959 1.0521453801547964 1.3376294538112212 1.0 17.13801981471111 -6.415941726317654 5.256984794188812 1.1020313861326572 1.2508754199643635 0.3905587707185626 0.09004531809359305 0.2452418333572602 9.952394188193507 0.03215602862344898 0.028052357748263933 3.8375873482790806e-07 6.415941726317654 0.1488440338317063 TEST(ph)PITAVK ddPTM_KYSE-520_SHP099_60min_R1 1 TESTPITAVK 10 0 Q9Y678 Q9Y678 COPG1 Coatomer subunit gamma-1 1 T(0.001)ES(0.12)T(0.846)PIT(0.033)AVK 84.309 0.024973 353790000.0 597090.0 728110.0 511910.0 444790.0 453650.0 664520.0 487380.0 625450.0 735180.0 683320.0 True False 563968.2274305938 693130.502684609 544908.537684959 487062.70786901034 489349.6740845824 660372.4841888217 536649.1267704201 623280.4599311268 601689.8443796294 677266.316414915 0.8327126475386217 1.0234238524568453 0.8045705573686476 0.7191597988325469 0.7225365594363786 0.9750558505322985 0.7923753385686638 0.9202885848958791 0.8884095219213809 1.0 19.369363720084223 -8.049793566513099 0.8668890859078888 0.9978414478468471 0.8382301054605374 0.21274452649247955 0.0932662160240415 1.1634550489367923 1.9629977344828435 0.09494752213387105 0.03364005884098374 8.91674677739217e-09 8.049793566513099 -0.1596113423863097 TESVSDKEDKPPLAPSGGTEGPEQPPPPCPSQTGS(ph)PPVGLIK ddPTM_KYSE-520_SHP099_60min_R1 1 TESVSDKEDKPPLAPSGGTEGPEQPPPPCPSQTGSPPVGLIK 42 2 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 TESVSDKEDKPPLAPSGGTEGPEQPPPPCPSQT(0.04)GS(0.96)PPVGLIK 147.53 1.5233e-07 5283000000.0 102500.0 81852.0 70514.0 63325.0 70673.0 73238.0 62066.0 82558.0 91573.0 90287.0 True False 96814.12067131573 77919.70705764327 75059.44526638907 69343.38896064446 76234.56302563575 72780.89447574333 68340.2369857871 82271.62556718201 74945.65156747428 89487.12742222298 1.081877622627466 0.8707364880537322 0.8387736586094618 0.7748979206077847 0.8519053546767875 0.8133113283695497 0.7636879063436746 0.9193682704664727 0.8375020377384746 1.0 16.449392547515426 -4.256293022193572 3.2815121290158826 0.8404315538256203 1.1167916325240146 0.5241580462010891 0.0653969469419225 0.24301022797965258 4.2111278297903985 0.015739943401416153 0.17171949549695034 5.5425162846892924e-05 4.256293022193572 0.2763600786983943 TESVTSGPMS(ph)PEGS(ph)PSKS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 TESVTSGPMSPEGSPSKSPSK 21 1 P35612 P35612 ADD2 Beta-adducin 3 TES(0.001)VT(0.005)S(0.005)GPMS(0.99)PEGS(0.99)PS(0.015)KS(0.961)PS(0.035)K 108.32 0.0018789000000000002 424670000.0 1248400.0 1164400.0 911640.0 1188300.0 1152700.0 1129300.0 1112200.0 1179800.0 1173300.0 1117700.0 True False 1179148.7633762984 1108460.4761999676 970405.7730755729 1301235.6747245772 1243410.9320341635 1122251.619807434 1224632.0300259765 1175707.54916739 960258.296486057 1107798.0475574408 1.0644076923372243 1.0005979687759763 0.8759771469314276 1.1746145225599942 1.1224166126449966 1.0130471183640932 1.1054650554098198 1.0613013371522737 0.8668171049798373 1.0 20.079263470257345 -7.743221947906823 24.996566293840164 0.9334085482733806 1.0515200465260168 0.25180424647570343 0.0819193450311111 302.00631517155523 414393.2892484578 0.05746264434044277 0.021627194668884502 1.8062507985057167e-08 7.743221947906823 0.11811149825263623 TET(ph)PPPLASLNVSK ddPTM_KYSE-520_SHP099_60min_R1 7 TETPPPLASLNVSK 14 0 K7ELG9;Q3MHD2;Q3MHD2-2 K7ELG9 LSM12 Protein LSM12 homolog 1 TET(1)PPPLASLNVSK;TET(1)PPPLASLNVSK;T(0.165)ET(0.835)PPPLASLNVSK;T(0.001)ET(0.999)PPPLASLNVSK;TET(1)PPPLASLNVSK;TET(1)PPPLASLNVSK;T(0.013)ET(0.987)PPPLASLNVSK 166.79 1.9553e-05 28637460000.0 13914180.0 16598540.0 10435310.0 11105680.0 12978390.0 17362550.0 12931560.0 16746570.0 15730380.0 16546300.0 True False 13142332.69816983 15801121.223483535 11107986.779686349 12161160.488155542 13999715.456062175 17254183.88513911 14238808.284663491 16688480.057348823 12874139.522610018 16399712.654826617 0.8013757908314263 0.9634998829588084 0.6773281345522323 0.7415471687899591 0.8536561432947976 1.052102817183264 0.8682352297479342 1.0176080769584228 0.7850222618882908 1.0 23.967167201305603 -6.00886846445391 23.833324898360488 0.9422504239818303 0.7992052426400996 0.33956995249216604 0.09821211977036386 277.31555405098595 745268.6493339913 0.030840345255117706 0.03322272928292864 9.797866902210321e-07 6.00886846445391 -0.14304518134173072 TETVEEPMEEEEAAKEEKEES(ph)DDEAAVEEEEEEK ddPTM_KYSE-520_SHP099_60min_R1 3 TETVEEPMEEEEAAKEEKEESDDEAAVEEEEEEK 34 2 P14625 P14625 HSP90B1 Endoplasmin 1 T(0.003)ET(0.005)VEEPMEEEEAAKEEKEES(0.992)DDEAAVEEEEEEK;TETVEEPMEEEEAAKEEKEES(1)DDEAAVEEEEEEK;TETVEEPMEEEEAAKEEKEES(1)DDEAAVEEEEEEK 303.91 1.0933e-54 1250360000.0 1561620.0 1394080.0 1151950.0 1408450.0 1356520.0 1510350.0 1304700.0 1650060.0 1730210.0 1347660.0 True False 1474993.825587708 1327106.3042432605 1226206.5401851668 1542308.6645340668 1463270.406456998 1500923.3454141126 1436591.8086449325 1644336.3269868994 1416047.4790446938 1335720.7808636145 1.1042680826108329 0.9935506905756274 0.9180111275893746 1.1546639736613833 1.095491233962023 1.1236804629510113 1.0755180493007674 1.2310479484520325 1.0601373425733063 1.0 20.34918702761215 -5.276948282556267 24.794622260724132 1.1144731147604512 1.00410403109723 0.2894409086619132 0.0712602688936732 782.7054995723842 1251337.2990207255 0.019379096031557016 0.028863384634501152 5.285081847988513e-06 5.276948282556267 -0.11036908366322118 TEVALAKDMES(ph)PTKLDVTLAK ddPTM_KYSE-520_SHP099_60min_R1 1 TEVALAKDMESPTKLDVTLAK 21 2 E7EVA0;P27816-6;P27816;P27816-2;P27816-5;H7C456 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 TEVALAKDMES(0.989)PT(0.011)KLDVTLAK 189.08 2.3252e-13 336780000.0 91159.0 110900.0 92771.0 75123.0 83940.0 88188.0 78287.0 98318.0 110890.0 115800.0 True False 86102.22854903885 105572.19753570642 98751.16709884815 82262.6673334465 90545.60044673167 87637.58598032246 86201.01396749119 97976.95780559369 90755.17130941676 114774.10209103671 0.7501886486617351 0.919825950387035 0.8603959020347686 0.7167354467142533 0.7889027123463145 0.7635658600997804 0.7510493429878295 0.8536503969151522 0.7907286544261651 1.0 16.808437619936225 -9.253220470616535 1.0686899938792256 1.0027027616931448 0.7999799586314512 0.5132840768800322 0.058547364123408704 18.741375340254095 14.565038673158613 0.2904467459611495 0.018463709529607884 5.58186757976989e-10 9.253220470616535 -0.20272280306169355 TEVS(ph)PVPR ddPTM_KYSE-520_SHP099_60min_R1 6 TEVSPVPR 8 0 E9PPY3;O43159 E9PPY3 RRP8 Ribosomal RNA-processing protein 8 1 T(0.006)EVS(0.994)PVPR;T(0.002)EVS(0.998)PVPR;TEVS(1)PVPR;TEVS(1)PVPR;T(0.011)EVS(0.989)PVPR;TEVS(1)PVPR 117.31 0.00098964 3059010000.0 6461930.0 5834700.0 5187920.0 4381660.0 5048750.0 5792300.0 4648990.0 5559460.0 6651560.0 5677200.0 True False 6103473.86136191 5554392.253936746 5522341.6241654875 4798091.649005884 5446057.9015420135 5756148.107155403 5118955.278970034 5540175.530847712 5443804.37618239 5626904.424794767 1.084694780751412 0.9871133103774611 0.9814173490901095 0.8527053752438469 0.9678603883058935 1.0229688781972426 0.9097284923507014 0.9845867483433899 0.967459897167339 1.0 22.42391002817981 -4.2441463447329015 2.078928873630634 0.9572671149017372 1.1235008052169315 0.3983828720762794 0.045595263296452214 0.7555405612115801 3.47701745021882 0.012304130016000371 0.24033642110086978 5.699721757088059e-05 4.2441463447329015 0.1662336903151943 TEVSETARPS(ph)SPDTR ddPTM_KYSE-520_SHP099_60min_R1 1 TEVSETARPSSPDTR 15 1 O75132 O75132 ZBED4 Zinc finger BED domain-containing protein 4 1 T(0.012)EVS(0.01)ET(0.114)ARPS(0.432)S(0.432)PDT(0.001)R 63.128 0.047524000000000004 9841000.0 22771.0 19886.0 16265.0 13953.0 19537.0 16649.0 17520.0 17866.0 20953.0 18562.0 True False 21507.847237136884 18930.646710505458 17313.46792492013 15279.08892487759 21074.45074967591 16545.087415367027 19291.092578722455 17804.02701595574 17148.46338214637 18397.55512101748 1.169060078671333 1.0289762191759366 0.941074387930009 0.8304956188131032 1.1455027915964946 0.8993090281037297 1.0485682718071703 0.9677387510917855 0.9321055580127523 1.0 14.167226436639252 -4.336423071944367 2.951604019460956 0.9713426844424454 1.1863588983283646 0.3562691110825841 0.08055544860861123 0.3489434135056963 4.719351455017231 0.020018085095310615 0.16094840520094789 4.608683966438866e-05 4.336423071944367 0.21501621388591918 TEVSETARPSS(ph)PDTR ddPTM_KYSE-520_SHP099_60min_R1 1 TEVSETARPSSPDTR 15 1 O75132 O75132 ZBED4 Zinc finger BED domain-containing protein 4 1 TEVSET(0.054)ARPS(0.313)S(0.632)PDTR 171.46 4.479e-08 14323000.0 26879.0 23239.0 19570.0 18571.0 21967.0 21560.0 19795.0 22774.0 26931.0 21120.0 True False 25387.968288041913 22122.56355754986 20831.513513107097 20335.982256425254 23695.677924867225 21425.436042724064 21796.071780582828 22695.002309491567 22041.009275262906 20932.893231111364 1.212826531322924 1.0568325798686231 0.9951569180196461 0.971484545012681 1.1319829353378486 1.0235296098907467 1.0412355110180647 1.0841789550505747 1.0529365927546324 1.0 14.35348410641808 -4.269070978629242 4.497766625270324 1.0403640183708078 1.2232811458711335 0.5863564553167276 0.04381688413363739 0.1349374825127038 6.97035817888981 0.011183565995394345 0.07752615424751426 5.381818179414902e-05 4.269070978629242 0.18291712750032563 TEWLDGK ddPTM_KYSE-520_SHP099_60min_R1 14 TEWLDGK 7 0 P62937;P62937-2;F5H284;Q9Y536;A0A0H2UH34;P0DN26;A0A0B4J2A2;A0A075B767;A0A075B759;P0DN37 P62937 PPIA;PPIAL4D;PPIAL4A;PPIAL4C;PPIAL4E Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase A-like 4D;Peptidyl-prolyl cis-trans isomerase A-like 4A/B/C;Peptidyl-prolyl cis-trans isomerase 0 ;;;;;;;;;;;;; 155.51 0.0088537 46814330000.0 92454890.0 98870110.0 67330990.0 59904830.0 96697370.0 100204790.0 72397530.0 76888970.0 78501020.0 81447270.0 False True 87326232.94744602 94120241.5085394 71671253.34879303 65598167.032156155 104306902.88622554 99579374.73653054 79716178.864203 76622260.10909055 64247213.61767478 80725710.55281714 1.0817648101135053 1.1659264547068744 0.8878367605312069 0.8126056318728424 1.292115017284112 1.233552161444003 0.9874942978921986 0.9491679860650867 0.7958705247399362 1.0 26.266524898799805 -7.159579699386625 3.2321099694330027 0.9011052482934155 1.0731365511183588 0.20038809242459654 0.1447250656965573 0.4531265690973462 8.934147435384563 0.08505441922614386 0.0443002460402083 6.925008337487088e-08 7.159579699386625 0.17203130282494328 TFAPEEISAMVLTK ddPTM_KYSE-520_SHP099_60min_R1 1 TFAPEEISAMVLTK 14 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 182.08 1.6286e-08 84367000.0 62125.0 82698.0 79971.0 67802.0 81306.0 79109.0 66496.0 80051.0 75916.0 66564.0 False True 58678.80240688288 78725.06394777134 85126.05861812405 74245.88169458538 87704.31963214168 78615.25138700637 73218.0646184206 79773.32176504392 62131.56808662363 65974.29474600835 0.8894191689776741 1.1932687458176194 1.2902913012688846 1.1253759055768835 1.32937108262833 1.1916042708704033 1.109796851945136 1.2091576283181178 0.9417541835925844 1.0 16.00961640301877 -7.762269993053726 24.99999759103499 0.9708770074999913 1.1751521100520663 0.32205859832519457 0.11352726352617393 24.928292620701463 750081.4138283657 0.0901734467121392 0.028468343449232603 1.728741297762411e-08 7.762269993053726 0.20427510255207504 TFAPLPEFEQEEDDGEVT(ph)EDS(ph)DEDFIQPR ddPTM_KYSE-520_SHP099_60min_R1 2 TFAPLPEFEQEEDDGEVTEDSDEDFIQPR 29 0 H0Y612;Q9UPN9-2;Q9UPN9 H0Y612 TRIM33 E3 ubiquitin-protein ligase TRIM33 2 TFAPLPEFEQEEDDGEVT(1)EDS(1)DEDFIQPR;TFAPLPEFEQEEDDGEVT(1)EDS(1)DEDFIQPR 117.8 0.00036301 84974000.0 74482.0 73073.0 66338.0 62500.0 71985.0 63088.0 63596.0 68148.0 90592.0 69762.0 True False 70350.33498381404 69562.46339519092 70614.25362455285 68439.9812086898 77649.80996137697 62694.24439069461 70024.904317148 67911.61049386278 74142.7764384768 69143.96295401473 1.0174472503203444 1.0060525955310737 1.0212641944100884 0.9898186086644597 1.1230164810342038 0.9067204382310339 1.0127406837198376 0.9821770056632197 1.072295733002556 1.0 16.0773156729134 -6.2698775112614635 24.999457745498642 0.9947949649347834 1.0272184894398297 0.11428282838879333 0.05042497527388845 1675.9788594663894 4965364.120399164 0.017202651670989794 0.015410181083455094 5.371832825789751e-07 6.2698775112614635 0.032423524505046375 TFCPPPLPKPSSTTPTPLVSETGGNS(ph)PSDKVDNELK ddPTM_KYSE-520_SHP099_60min_R1 2 TFCPPPLPKPSSTTPTPLVSETGGNSPSDKVDNELK 36 2 A0A3B3IRW6;Q2KHR3-2;Q2KHR3;H0YCQ7 A0A3B3IRW6 QSER1 Glutamine and serine-rich protein 1 1 TFCPPPLPKPSSTTPTPLVSETGGNS(0.99)PS(0.01)DKVDNELK;TFCPPPLPKPSSTTPTPLVSETGGNS(0.976)PS(0.024)DKVDNELK 346.5 2.4896e-82 4043000000.0 1523610.0 1534260.0 1321000.0 1241070.0 1208890.0 1534190.0 1220710.0 1484260.0 1895160.0 1528590.0 True False 1439092.3160587663 1460551.846628789 1406153.7736747318 1359020.9196587 1304022.7653567963 1524614.551131116 1344111.2797815234 1479111.4484888865 1551046.7170958116 1515047.881825026 0.9498658975221539 0.9640301565052909 0.9281249725130005 0.8970151610136731 0.8607138962406727 1.0063144336366228 0.88717412558764 0.9762803316203773 1.0237608564736724 1.0 20.53093195891673 -7.497523059052232 5.590374067168948 1.009081182273177 0.9282991867580845 0.4345703001170147 0.0392169387326174 0.16415123124334088 16.237191967270455 0.02413106342063893 0.010368788622302737 3.1803648210090216e-08 7.497523059052232 -0.08078199551509235 TFDFWK ddPTM_KYSE-520_SHP099_60min_R1 2 TFDFWK 6 0 Q5QPD0;Q5TFE4-2;Q5TFE4 Q5QPD0 NT5DC1 5-nucleotidase domain-containing protein 1 0 ; 137.44 0.05243099999999999 1055260000.0 3357000.0 3138300.0 2064130.0 1942870.0 3197200.0 3396000.0 2311100.0 2308900.0 2271600.0 2535300.0 False True 3170780.517986412 2987531.3573156665 2197187.1225247723 2127519.780654833 3448801.4504204225 3374804.3043177654 2544728.542162416 2300890.964801314 1859134.702375971 2512839.214433556 1.2618318353891056 1.1889066917435527 0.8743842860714278 0.8466597339115541 1.3724719952676523 1.3430243705737908 1.012690556381678 0.9156538753395651 0.7398542221473 1.0 21.260886931764233 -7.13242729082345 3.43132574956901 0.8692516482024549 1.1357413367983322 0.3051652377538835 0.1756496833110576 0.3480687972409464 7.498551800124756 0.1011076730239325 0.05436349837490646 7.371785827571051e-08 7.13242729082345 0.2664896885958773 TFDHYCEYR ddPTM_KYSE-520_SHP099_60min_R1 4 TFDHYCEYR 9 0 Q14204;A0A2R8Y6H2;A0A2R8YFZ7;A0A2R8YGC7 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ;;; 183.43 1.1599e-05 3072270000.0 3270260.0 2941490.0 1789620.0 1971880.0 3115800.0 2807550.0 2393860.0 2294100.0 2278230.0 2261450.0 False True 3088852.1586983134 2800176.4051334956 1904981.7686932415 2159286.882332662 3360995.7335230745 2790027.0390422037 2635854.7306221775 2286142.302546965 1864560.8615046677 2241415.3123814776 1.3780811354484968 1.2492894064145306 0.8499012914608942 0.9633586736045116 1.4994970878253062 1.24476130042934 1.1759778368880744 1.019954798166327 0.8318676379182908 1.0 21.095978560251755 -7.401907485459307 3.194721178435034 0.9168237422202639 1.1885959518096552 0.2899625544668938 0.17893725358133614 0.37586976615018636 7.105566831703923 0.129538654467607 0.05284668490404391 3.963624594254403e-08 7.401907485459307 0.2717722095893913 TFEHVTSEIGAEEAEEVGVEHLLR ddPTM_KYSE-520_SHP099_60min_R1 2 TFEHVTSEIGAEEAEEVGVEHLLR 24 0 H3BNT7;H3BTM8;P51665 H3BNT7 PSMD7 26S proteasome non-ATPase regulatory subunit 7 0 ; 260.56 1.9887999999999997e-37 169710000.0 97877.0 95275.0 74157.0 148112.0 76743.0 81860.0 66187.0 88105.0 89166.0 71327.0 False True 92447.5676970377 90697.84598930944 78937.2788753951 162188.5199485035 82782.23749206006 81349.0813755747 72877.82788287116 87799.38431886162 72975.7020919422 70695.09827156634 1.3076941677329872 1.2829439127576434 1.1165877239772333 2.2941975315668515 1.170975633615537 1.1507032787914435 1.0308752610106027 1.2419444412056875 1.0322597163896032 1.0 16.109322567081158 -5.971443368261181 24.999871783964505 1.1089906991375302 1.4918108227314242 0.2953958222278592 0.30090304217560193 294.257592159977 257606.1938546214 0.09501444619695229 0.10773462328676721 1.067964045327824e-06 5.971443368261181 0.38282012359389395 TFEINPR ddPTM_KYSE-520_SHP099_60min_R1 2 TFEINPR 7 0 P14625;Q58FF3;H0YIV0 P14625 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein 0 ; 98.99700000000001 0.041038 633790000.0 686170.0 674690.0 512650.0 439810.0 737250.0 735470.0 525490.0 644550.0 623230.0 583450.0 False True 648106.7822540164 642276.8796696627 545696.2392690015 481609.41016630223 795267.3806213129 730879.658921256 578611.6574881774 642314.2064891008 510067.1423497874 578281.0869172317 1.120746980865343 1.1106655469117748 0.943652233515128 0.8328292608249076 1.3752263364877055 1.2638830414072757 1.0005716434073748 1.1107300947939078 0.8820401598622443 1.0 19.14141139299101 -7.751676133096179 24.946682574357645 0.9410200745972331 1.0933914644499936 0.14914595301053846 0.14687849448017146 361.9156295511829 924770.0911263658 0.10920957497717519 0.04013773935026258 1.771429475940952e-08 7.751676133096179 0.15237138985276044 TFEMSDFIVDTR ddPTM_KYSE-520_SHP099_60min_R1 1 TFEMSDFIVDTR 12 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 162.36 1.9047999999999998e-05 0.0 90215.0 118880.0 91516.0 80957.0 112650.0 121100.0 93904.0 104440.0 105370.0 105310.0 False True 85210.59411085612 113168.82635748197 97415.26779077723 88651.1289393905 121514.91410917713 120344.16998023594 103396.73273472331 104077.72201647925 86237.46416154066 104377.03532994026 0.8163730062029622 1.084231085887336 0.9333017313898926 0.8493355713654877 1.164192044016802 1.1529755525228598 0.9906080624716138 0.9971323834547047 0.8262110902933807 1.0 16.67144480454357 -1.4238538711224344 20.952141341188465 0.9893017564339347 0.14441837082882136 0.0 0.12074528279979087 0.0 0.0 0.028108915466018815 0.0 0.03768305714105713 1.4238538711224344 -0.8448833856051133 TFIAIKPDGVQR ddPTM_KYSE-520_SHP099_60min_R1 2 TFIAIKPDGVQR 12 1 Q32Q12;P22392-2;J3KPD9;P22392;E7ERL0;P15531;P15531-2;E5RHP0;F6XY72;C9K028 Q32Q12 NME1-NME2;NME2;NME1 Nucleoside diphosphate kinase;Nucleoside diphosphate kinase B;Nucleoside diphosphate kinase A 0 ; 157.52 6.540700000000001e-06 7536900000.0 10473300.0 9611200.0 8192900.0 7249600.0 11512500.0 9694700.0 7693500.0 9206800.0 9423700.0 8147200.0 False True 9892325.17099407 9149463.525294691 8721027.443103494 7938599.804328277 12418468.25283535 9634191.781233635 8471234.061324278 9174863.759683272 7712593.632144931 8075022.146425686 1.2250523889117495 1.133057390975032 1.0800004365268219 0.9831056386442488 1.5378865875101333 1.1930854933318167 1.0490663564401457 1.1362029222104881 0.9551173349485884 1.0 22.945034785848346 -7.3835411715014025 1.4848006343517588 0.9880635196611711 1.1829616078971936 0.22628322615846153 0.14116072465436755 0.7167527754165182 2.782772164130089 0.1272746475856234 0.045158413459245594 4.134841138294292e-08 7.3835411715014025 0.1948980882360225 TFKES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 TFKESPK 7 1 P46013;P46013-2 P46013;P46013-2 MKI67 Antigen KI-67 1 T(0.036)FKES(0.964)PK 67.93 0.020334 4396900000.0 5663500.0 4611600.0 4937500.0 4280800.0 4287100.0 4126700.0 4561100.0 5212800.0 5690700.0 4447900.0 True False 5349334.3650926575 4390051.813847278 5255779.150279326 4687645.944930547 4624470.379737705 4100943.734578362 5022180.500046287 5194718.013476669 4657412.330872922 4408495.066413836 1.2134150735126406 0.995816428897229 1.1921934971234363 1.0633211275755814 1.0489907122657978 0.9302366618988516 1.1392051991410448 1.178342707708279 1.0564630924406528 1.0 22.071854814502586 -4.238092708901733 23.549196267183405 1.073937447186351 1.2134154223277074 0.23185445005792393 0.0789967022644464 4875.885219773588 4918016.922274694 0.019970831667020905 1.0214692272805157 5.779726543352036e-05 4.238092708901733 0.1394779751413564 TFLDKDAQRLS(ph)PIPEEVPK ddPTM_KYSE-520_SHP099_60min_R1 5 TFLDKDAQRLSPIPEEVPK 19 2 Q96T23-3;Q96T23-2;Q96T23;H0YCN2;H0YER1 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 TFLDKDAQRLS(1)PIPEEVPK;TFLDKDAQRLS(1)PIPEEVPK;TFLDKDAQRLS(1)PIPEEVPK;TFLDKDAQRLS(1)PIPEEVPK;TFLDKDAQRLS(1)PIPEEVPK 216.25 9.4809e-19 14484320000.0 7372120.0 8004260.0 8213470.0 5558172.0 6131960.0 6560350.0 5326590.0 5316130.0 9616720.0 5836390.0 True False 6963173.807643129 7619723.334960805 8742923.418216655 6086418.9957546545 6614510.365920184 6519404.422211726 5865053.699708742 5297689.585824071 7870566.065783161 5784684.125242714 1.203725848617701 1.317223753274704 1.5113916730673378 1.0521609934058898 1.143452299678101 1.127011307974951 1.013893511335445 0.9158131146187332 1.3605870079298283 1.0 22.46380675192612 -5.282234358968716 24.932526329230637 1.0849551903788457 1.3414247673628314 0.4460807937941761 0.1309773379618477 677.4559637958018 812246.8765130198 0.03634794389588483 0.05397496184324262 5.221143636246494e-06 5.282234358968716 0.25646957698398576 TFLEGDWTS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 12 TFLEGDWTSPSK 12 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 TFLEGDWT(0.049)S(0.949)PS(0.002)K;TFLEGDWT(0.024)S(0.975)PS(0.001)K;TFLEGDWT(0.001)S(0.973)PS(0.026)K;TFLEGDWT(0.023)S(0.977)PSK;TFLEGDWTS(0.988)PS(0.012)K;TFLEGDWTS(0.946)PS(0.054)K;TFLEGDWT(0.031)S(0.967)PS(0.001)K;TFLEGDWTS(0.982)PS(0.018)K;TFLEGDWT(0.001)S(0.998)PS(0.001)K;TFLEGDWT(0.001)S(0.994)PS(0.005)K;TFLEGDWT(0.027)S(0.973)PSK;TFLEGDWTS(1)PSK 315.29 2.3688e-39 16510810000.0 26055450.0 24838380.0 22433650.0 19662540.0 22032960.0 22746830.0 21249930.0 22745270.0 27870450.0 22750020.0 True False 24610102.248248152 23645106.941631544 23879758.97410913 21531261.88984178 23766828.601606153 22604858.596461814 23398080.30373127 22666371.96715591 22809878.836870197 22548472.52204773 1.0914310148585267 1.0486345324948967 1.0590410925068066 0.95488782527458 1.0540327544744827 1.0025006604930313 1.0376791723187813 1.0052287109467348 1.011593083059922 1.0 24.42652636999791 -5.033391513979801 24.893451748442935 1.0119667944141466 1.0659840583253675 0.49628362916004354 0.026297503728792318 472.90162629465823 352548.8090421539 0.006722566486158863 0.011655270326505113 9.259946681199124e-06 5.033391513979801 0.05401726391122086 TFLVGER ddPTM_KYSE-520_SHP099_60min_R1 1 TFLVGER 7 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 96.19 0.045877999999999995 387290000.0 546200.0 570640.0 394820.0 393040.0 566510.0 496180.0 457370.0 440460.0 489520.0 548750.0 False True 515901.1971772944 543225.5978518978 420270.7289343354 430394.4034282146 611091.1139990233 493083.156571374 503605.4231010439 438932.1470641363 400635.50779498374 543888.5019210401 0.9485422018577462 0.9987811765337916 0.7727148624211013 0.791328373201568 1.1235595381049983 0.906588675490989 0.9259350424255809 0.8070259722605038 0.7366133065507361 1.0 19.052951401257072 -7.253915192832457 23.3894542902915 0.8288647287808258 0.9228970169475036 0.08116836243384085 0.11184643389144878 511.8495967925949 1591131.6345450252 0.05499937491068248 0.0308755941240897 5.572945644042589e-08 7.253915192832457 0.09403228816667775 TFLVWVNEEDHLR ddPTM_KYSE-520_SHP099_60min_R1 1 TFLVWVNEEDHLR 13 0 P12277;H0YJG0 P12277 CKB Creatine kinase B-type 0 74.76899999999999 0.016771 0.0 72385.0 61553.0 46646.0 35417.0 57032.0 60454.0 39623.0 45028.0 49902.0 57750.0 False True 68369.65975407994 58595.90148706338 49652.875796238826 38783.02103149065 61520.09393230878 60076.68416172732 43628.47952321463 44871.8083776142 40841.05472704952 57238.37992882015 1.1944723075513721 1.0237169808078321 0.8674752125756456 0.6775702086558005 1.0748049474638037 1.0495874313080977 0.7622242204875406 0.7839461639797523 0.713525693386818 1.0 15.804695218250409 -6.771105549922064 24.933390430723247 0.7969195019692863 0.9684749398443077 0.22860351509872046 0.14710765957129773 315.300124372891 813292.1648866303 0.06437518356767018 0.04401976288743515 1.6939260625600032e-07 6.771105549922064 0.17155543787502137 TFNILNDFS(ph)PVEPNSSSLMETNPLEWPER ddPTM_KYSE-520_SHP099_60min_R1 1 TFNILNDFSPVEPNSSSLMETNPLEWPER 29 0 Q96DY7 Q96DY7 MTBP Mdm2-binding protein 1 T(0.004)FNILNDFS(0.996)PVEPNSSSLMETNPLEWPER 102.53 0.0020445 8487900.0 8820.1 9254.1 9341.7 5532.2 5497.1 8601.2 4646.5 7711.4 9351.4 7638.4 True False 8330.831470566562 8809.519145312706 9943.880929248471 6057.978624683423 5929.690495779472 8547.516720346859 5116.213565469974 7684.650953254285 7653.42148961025 7570.729718585271 1.100400064489864 1.16362880102381 1.3134639986998065 0.8001842424531127 0.7832389632432345 1.1290215128620544 0.6757886961557031 1.0150475897177191 1.0109225628306318 1.0 12.886216648366677 -5.263156934959107 24.999982057468586 0.9102378094268785 1.189610741563286 0.4646520573035112 0.13572996134076265 132.36594916839286 1926668.0461468059 0.03728436888189064 0.05872622271477254 5.455606837882125e-06 5.263156934959107 0.27937293213640746 TFNKDTVIIVS(ph)EPS(ph)EDEESQGLPTMAR ddPTM_KYSE-520_SHP099_60min_R1 4 TFNKDTVIIVSEPSEDEESQGLPTMAR 27 1 D6RAY8;Q9H4L7;Q9H4L7-2 D6RAY8 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 2 TFNKDT(0.001)VIIVS(0.933)EPS(0.72)EDEES(0.344)QGLPT(0.002)MAR;TFNKDTVIIVS(1)EPS(0.998)EDEES(0.002)QGLPTMAR;TFNKDTVIIVS(1)EPS(0.999)EDEES(0.001)QGLPTMAR;TFNKDTVIIVS(1)EPS(0.999)EDEES(0.001)QGLPTMAR 126.04 0.00011159999999999999 2347660000.0 2757080.0 3582880.0 3277440.0 2278950.0 2724350.0 2561820.0 1975067.0 1952122.0 3958410.0 2206949.0 True False 2604139.2762972824 3410753.066787476 3488709.0264894078 2495540.722808696 2938740.845568898 2545830.731121124 2174726.0471563726 1945350.5444107016 3239662.527395696 2187397.1488403417 1.1905196446278072 1.5592747154286555 1.5949134012261845 1.1408722572998313 1.3434875542042672 1.1638630563593846 0.9942072240101955 0.8893449209449861 1.481058219863374 1.0 21.060783752510783 -5.874968699959125 1.2550923487455257 1.0889304817489847 1.4381268987613167 0.3178447156679405 0.1946776252545045 0.5066583484388802 1.679014615669923 0.08159546285090095 0.10472989584110441 1.3336175438598922e-06 5.874968699959125 0.34919641701233206 TFPLAHS(ph)PQAECEDQLDAQER ddPTM_KYSE-520_SHP099_60min_R1 2 TFPLAHSPQAECEDQLDAQER 21 0 A0A1W2PRB5;A0A0J9YVS1;A0A3B3IT55;A0A0G2JNB1;A0A0G2JNT7;Q7Z3B3;A0A0G2JQF5;A0A0G2JQF4;Q7Z3B3-4;Q7Z3B3-2 A0A1W2PRB5 KANSL1 KAT8 regulatory NSL complex subunit 1 1 TFPLAHS(1)PQAECEDQLDAQER;T(0.001)FPLAHS(0.999)PQAECEDQLDAQER 193.14 1.9343e-13 873450000.0 350370.0 352120.0 288760.0 216800.0 299550.0 294130.0 284720.0 268900.0 343300.0 319820.0 True False 330934.2776547211 335203.6266571048 307373.93163233594 237404.60681670316 323122.8807936443 292294.2255680164 313502.2761994214 267967.24866173154 280965.3738887438 316986.6436161947 1.0440006994597983 1.057469244864989 0.9696747097158523 0.7489419872975817 1.0193580306963321 0.9221026546529332 0.9890078415386101 0.8453581690532819 0.8863634463694778 1.0 18.274062527436723 -4.935012512452181 5.1096308376566615 0.9130758527866363 1.046830228572134 0.33168768016238936 0.07571325151525878 0.21793932181449044 11.052863390647854 0.019748600556354932 0.042382847574558076 1.1614151518427819e-05 4.935012512452181 0.13375437578549776 TFQARPLS(ph)ADLTK ddPTM_KYSE-520_SHP099_60min_R1 5 TFQARPLSADLTK 13 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 TFQARPLS(0.974)ADLT(0.026)K;TFQARPLS(1)ADLTK;TFQARPLS(0.984)ADLT(0.016)K;TFQARPLS(1)ADLTK;TFQARPLS(0.999)ADLT(0.001)K 180.46 2.5541e-07 5680760000.0 5952070.0 5636750.0 5533960.0 4906160.0 5316770.0 5341250.0 4883840.0 5641390.0 6924700.0 5655000.0 True False 5621896.811942615 5365952.06906576 5890687.916249072 5372439.971309213 5735169.550716817 5307913.277513911 5377546.208885154 5621821.334800322 5667349.03748146 5604901.09952342 1.0030322947929695 0.9573678417844022 1.0509887349751723 0.9585253826808874 1.0232418822170606 0.9470128345289157 0.9594364134886165 1.0030188285174808 1.0111416663468602 1.0 22.418257485711532 -7.491365134611044 23.942366158183223 1.0060740009575233 0.9856574289129315 0.07283428687708826 0.031245201814248263 1016.263767542941 772108.3504519032 0.016648783621607207 0.007981589241261047 3.225780894677684e-08 7.491365134611044 -0.020416572044591796 TFS(ph)ATVR ddPTM_KYSE-520_SHP099_60min_R1 13 TFSATVR 7 0 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 T(0.106)FS(0.887)AT(0.007)VR;T(0.001)FS(0.998)ATVR;TFS(0.874)AT(0.126)VR;T(0.001)FS(0.991)AT(0.008)VR;T(0.001)FS(0.802)AT(0.196)VR;T(0.006)FS(0.951)AT(0.043)VR;TFS(0.871)AT(0.129)VR;TFS(0.98)AT(0.02)VR;TFS(0.983)AT(0.017)VR;T(0.001)FS(0.94)AT(0.059)VR;T(0.024)FS(0.928)AT(0.048)VR;TFS(0.835)AT(0.165)VR;T(0.002)FS(0.972)AT(0.026)VR 162.59 0.00092013 164118900000.0 60654650.0 53465100.0 51575120.0 44896790.0 49018910.0 50619420.0 49174530.0 51337030.0 59643380.0 52132950.0 True False 57290015.65245296 50896556.34324882 54899734.75830971 49163767.42288789 52876419.33755425 50303485.423459545 54145571.389564164 51158953.82508287 48813645.67925559 51671092.621821396 1.108744033569335 0.9850102593293049 1.0624844951531915 0.9514752819863029 1.0233269059076144 0.973532450564355 1.0478890350907302 0.9900884852486699 0.9446993125638092 1.0 25.6228540551045 -1.6190311950764016 1.3101090978713923 0.9969893271012343 144.59508848462076 0.43886607196750926 0.03688233004098832 1579.8682493310127 2.611503299315511 0.009987422765070832 681931.0298393863 0.024041901024694792 1.6190311950764016 143.59809915751953 TFS(ph)EPGDHPGMLTSGK ddPTM_KYSE-520_SHP099_60min_R1 3 TFSEPGDHPGMLTSGK 16 0 Q9HA47-3;Q9HA47;Q9HA47-4 Q9HA47-3 UCK1 Uridine-cytidine kinase 1 1 T(0.024)FS(0.976)EPGDHPGMLTSGK;T(0.198)FS(0.802)EPGDHPGMLTSGK;TFS(0.992)EPGDHPGMLT(0.007)S(0.001)GK 253.79 7.976099999999999e-24 1872020000.0 1751050.0 1855640.0 1733280.0 2436530.0 2036570.0 2418120.0 2363870.0 2657410.0 2854750.0 2537180.0 True False 1653915.7658683667 1766492.269027574 1845010.0021460562 2668097.0786305456 2196836.4725017925 2403027.6161239296 2602833.0487479833 2648192.064954158 2336399.3623911785 2514702.559096171 0.657698366705768 0.7024656902812724 0.73368915757941 1.0609990708362373 0.8735969447183347 0.9555911920603527 1.0350460889829802 1.0530836163406798 0.9290957111169927 1.0 21.261956336395126 -5.169194545797087 5.040903991710861 0.9846439917899191 0.6900160615539827 0.848035878636767 0.05616952571565598 0.0830470364909401 3.437810912996433 0.015887084942081832 0.028173964507315116 6.77338020485112e-06 5.169194545797087 -0.2946279302359365 TFS(ph)FLMNR ddPTM_KYSE-520_SHP099_60min_R1 2 TFSFLMNR 8 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 T(0.004)FS(0.996)FLMNR;TFS(1)FLMNR 114.4 0.0010375 277760000.0 413370.0 433020.0 429500.0 510400.0 473530.0 427210.0 412770.0 508560.0 517560.0 526800.0 True False 390439.5420673345 412217.06922372937 457186.25722429785 558908.2625426438 510794.11698285537 424543.6239244969 454496.8198469901 506795.9240587967 423584.1506258615 522132.96184419835 0.7477780002401756 0.7894867770227705 0.8756127090875365 1.0704328272410792 0.9782836064949938 0.8130948531289591 0.8704618422129218 0.9706261835467531 0.8112572497429432 1.0 18.994057712203503 -4.802075338499301 3.451810316607727 0.9266588864856864 0.7616237850429821 0.40117420518632474 0.07811976121991236 0.2368385523288708 5.738868548449955 0.021808639658268996 0.05677309550101007 1.5773376199938737e-05 4.802075338499301 -0.16503510144270428 TFS(ph)FS(ph)DDENKPPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 TFSFSDDENKPPSPK 15 1 Q9UHJ3-2;Q9UHJ3 Q9UHJ3-2 SFMBT1 Scm-like with four MBT domains protein 1 3 T(0.266)FS(0.734)FS(1)DDENKPPS(1)PK 157.3 5.9359e-06 335070000.0 811220.0 736260.0 771850.0 798310.0 812660.0 914450.0 790530.0 941440.0 1093900.0 898460.0 True False 766220.0094730223 700888.9644512099 821604.6860036651 874181.1423793458 876611.7185971048 908742.5783519959 870444.4872293068 938174.3643737468 895275.334974941 890500.3433913027 0.8604376350434833 0.787073210754761 0.92263264366046 0.9816741215957219 0.9844035716580347 1.0204853766717497 0.9774779916584682 1.053536218527313 1.0053621445730763 1.0 19.764256642090302 -5.058510878615156 2.1803607938572593 1.0066461144492174 0.8222005443528364 0.8661692661864107 0.028014913984603373 0.09754145463189232 0.907401033342215 0.007869744646965509 0.01866430130622779 8.739551006700692e-06 5.058510878615156 -0.18444557009638096 TFS(ph)LDAVPPDHS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 TFSLDAVPPDHSPR 14 0 Q9BST9;Q9BST9-3;Q9BST9-2 Q9BST9 RTKN Rhotekin 2 T(0.39)FS(0.61)LDAVPPDHS(1)PR;T(0.379)FS(0.621)LDAVPPDHS(1)PR 129.46 2.6315e-05 209490000.0 297000.0 285260.0 240140.0 248960.0 245720.0 245370.0 221590.0 224080.0 291350.0 244230.0 True False 280524.81794517813 271555.68141601054 255619.8086375852 272621.08354744664 265056.76604444726 243838.55481461965 243990.47970999515 223302.71878066496 238448.1843358158 242066.31220806483 1.1588759104325794 1.1218235157918155 1.0559908411289822 1.1262247979104125 1.0949758503224574 1.0073213103896568 1.0079489272355933 0.9224857302272119 0.985053154074826 1.0 17.885042791311605 -6.377726168101119 1.6543897987498888 0.9688024847710901 1.1144518834800576 0.8015829319430458 0.0319390374311209 0.16183493993425657 0.8813864946294862 0.014645463501111934 0.012214071549723465 4.190577066240626e-07 6.377726168101119 0.14564939870896754 TFS(ph)LDAVPPDHSPR ddPTM_KYSE-520_SHP099_60min_R1 8 TFSLDAVPPDHSPR 14 0 Q9BST9;Q9BST9-3;Q9BST9-2 Q9BST9 RTKN Rhotekin 1 T(0.255)FS(0.745)LDAVPPDHSPR;T(0.137)FS(0.863)LDAVPPDHSPR;T(0.043)FS(0.957)LDAVPPDHSPR;T(0.321)FS(0.679)LDAVPPDHSPR;T(0.131)FS(0.869)LDAVPPDHSPR;T(0.192)FS(0.808)LDAVPPDHSPR;TFS(1)LDAVPPDHSPR;T(0.196)FS(0.804)LDAVPPDHSPR 278.16 1.8842999999999999e-25 31963300000.0 6702760.0 6526530.0 6273220.0 6174140.0 6053580.0 6025640.0 5967750.0 6363820.0 7762180.0 6304670.0 True False 6330944.541179206 6212985.702278746 6677601.7987068845 6760928.409277127 6529962.30584139 5988031.745662327 6571028.409627342 6341745.393746753 6352763.780634225 6248815.528759043 1.0131431328132796 0.9942661411085996 1.0686188075123086 1.0819535923506107 1.0449920110120743 0.9582666855988138 1.0515638330793047 1.0148715967946274 1.01663487286459 1.0 22.57515132026198 TFS(ph)LTEVR ddPTM_KYSE-520_SHP099_60min_R1 4 TFSLTEVR 8 0 O95239;O95239-2 O95239 KIF4A Chromosome-associated kinesin KIF4A 1 T(0.011)FS(0.91)LT(0.078)EVR;T(0.005)FS(0.991)LT(0.004)EVR;T(0.156)FS(0.842)LT(0.002)EVR;T(0.047)FS(0.953)LT(0.001)EVR 166.34 0.00016754 2072580000.0 3305260.0 3263360.0 3473700.0 3449760.0 3676910.0 4149300.0 3837880.0 4759380.0 5471680.0 4590520.0 True False 3121910.6389275454 3106583.287196774 3697620.2601165115 3777624.1531918384 3966261.898243886 4123402.679595317 4225850.364499279 4742870.821627646 4478160.841828023 4549851.56417052 0.6861565910220411 0.6827878323901173 0.812690306038725 0.8302741528844875 0.8717343505176465 0.9062719127073439 0.9287886219799548 1.042423198808754 0.9842432832519084 1.0 22.117388048453474 -5.214438134236397 0.42576850418079276 1.0239950032580827 0.5666654264627952 0.935581180383128 0.029811391675047184 0.5659399784506957 0.1430256172255208 0.026628135073487488 0.122174757289905 6.103259921133232e-06 5.214438134236397 -0.4573295767952875 TFSHELSDFGLESTAGEIPVVAIR ddPTM_KYSE-520_SHP099_60min_R1 2 TFSHELSDFGLESTAGEIPVVAIR 24 0 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ; 175.77 1.9612999999999997e-10 249880000.0 200046.0 160370.0 126398.0 289970.0 175968.0 159331.0 151935.0 171782.0 162271.0 112062.0 False True 188949.04959818572 152665.5844797223 134545.8173239505 317528.6616173405 189815.68047903842 158336.5561281665 167294.07254270543 171186.12833622034 132806.6769190224 111069.2178629167 1.7011828590653215 1.3745085039506126 1.2113690895888811 2.858835847833548 1.7089854788867946 1.4255664996541872 1.5062145548659782 1.5412562691086997 1.1957109222010944 1.0 16.761099512677585 -7.649672100888341 0.8652944650742689 1.0053878005829062 1.733873723715416 0.24841758164413408 0.42045127224183093 0.8877423423454199 1.364662817745214 0.42016400903333967 0.1598133308465266 2.240412046217094e-08 7.649672100888341 0.7284859231325098 TFSS(ph)SPPKPGDIFEVELAK ddPTM_KYSE-520_SHP099_60min_R1 2 TFSSSPPKPGDIFEVELAK 19 1 Q12923-3;Q12923;Q12923-4;Q12923-2 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 T(0.109)FS(0.127)S(0.382)S(0.382)PPKPGDIFEVELAK;T(0.007)FS(0.053)S(0.47)S(0.47)PPKPGDIFEVELAK 99.999 0.00036394 1993687000.0 1338700.0 1586440.0 1164340.0 1281380.0 1159650.0 1401180.0 1106810.0 1376100.0 1790190.0 1344760.0 True False 1264439.6423677104 1510225.0411050126 1239395.2194098693 1403161.9699390556 1250907.8574940714 1392434.7158786682 1218697.1562246452 1371326.6302841534 1465136.623017448 1332846.472607449 0.9486761366401681 1.1330825208627051 0.9298859582718775 1.0527558865756297 0.9385235908280711 1.0447075072004706 0.9143567404582665 1.0288706602504831 1.0992538549103856 1.0 20.34607917873529 -7.519278138852623 24.919544952941244 1.0544387147833114 0.9974338533700199 0.09895818311012239 0.06780863952665388 323.9096741776504 2241858.183423098 0.040743713617224626 0.0161363902188252 3.024975497210525e-08 7.519278138852623 -0.05700486141329153 TFSSS(ph)PPKPGDIFEVELAK ddPTM_KYSE-520_SHP099_60min_R1 1 TFSSSPPKPGDIFEVELAK 19 1 Q12923-3;Q12923;Q12923-4;Q12923-2 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 T(0.01)FS(0.017)S(0.143)S(0.83)PPKPGDIFEVELAK 149.18 1.0184e-06 1913000000.0 988200.0 1301400.0 879530.0 1131100.0 888590.0 1135500.0 888280.0 1116100.0 1457300.0 1109300.0 True False 933382.5760721393 1238878.7905587764 936225.9110977575 1238599.4039223853 958516.977614502 1128412.9233076605 978076.0111773731 1112228.509599699 1192691.0555434485 1099472.4650223416 0.8489367453628525 1.1267938306518681 0.8515228356161999 1.1265397209353638 0.8717971646475245 1.026322131027384 0.8895866356757723 1.0116019682012665 1.0847848340787805 1.0 20.068380043391414 -7.5181866456614355 24.674101481364826 1.044326102814447 0.9688807661718684 0.09374757202372386 0.10028277094372312 415.0496069575357 2182679.572077955 0.05809374055456642 0.023212190958322818 3.0325875964509865e-08 7.5181866456614355 -0.07544533664257869 TFSVYS(ph)SSR ddPTM_KYSE-520_SHP099_60min_R1 3 TFSVYSSSR 9 0 H0YCB7;H0YEE1;Q9UID3-2;Q9UID3 H0YCB7 VPS51 Vacuolar protein sorting-associated protein 51 homolog 1 TFSVYS(0.982)S(0.018)S(0.001)R;TFSVYS(0.99)S(0.01)SR;TFSVYS(0.975)S(0.025)SR 143.5 0.00066716 343930000.0 2468780.0 2275640.0 1973700.0 1864610.0 1927690.0 2034170.0 1995000.0 2176360.0 2334630.0 2225540.0 True False 2331831.8520090804 2166314.838594723 2100927.860031658 2041821.9737845592 2079388.2359442457 2021473.9904929502 2196674.0693237055 2168810.7151262425 1910720.0432329702 2205823.447043921 1.0571253357262234 0.9820889525396312 0.952446064007146 0.9256506800310133 0.9426811736591547 0.9164260146032893 0.9958521713365244 0.9832204467826833 0.8662162177093429 1.0 21.072885892317192 -4.294218847937521 1.9817876104686099 0.9466028486075307 1.0851917239019797 0.433290683903909 0.038036695060374624 0.647811500372673 2.892112091756494 0.010024223106067069 0.15962822683704675 5.0790343739559725e-05 4.294218847937521 0.13858887529444897 TFTAWCNSHLR ddPTM_KYSE-520_SHP099_60min_R1 4 TFTAWCNSHLR 11 0 P12814-3;P12814;P12814-2;P12814-4;G3V2N5;A0A494C1A0;P35609;P35609-2;Q08043;A0A494C033;A0A494C166;A0A494C0Q3;O43707;F5GXS2;O43707-3;K7EP19 P12814-3;O43707 ACTN1;ACTN2;ACTN3;ACTN4 Alpha-actinin-1;Alpha-actinin-2;Alpha-actinin-3;Alpha-actinin-4 0 ;;; 191.53 1.2814e-06 2387630000.0 1810510.0 1591150.0 1244880.0 1329080.0 2136860.0 1607360.0 1506920.0 1401700.0 1292170.0 1214550.0 False True 1710077.401137795 1514708.7656351589 1325126.956678424 1455395.3635975288 2305018.724929749 1597327.8700200822 1659254.1797219429 1396837.8298592411 1057544.5009549016 1203790.0319056017 1.42057780494389 1.2582831934879641 1.1007957547054494 1.2090109778477194 1.9148013057400886 1.3269156810440683 1.3783584643040618 1.16036666930033 0.8785124256933801 1.0 20.199152344856152 -7.503967714695841 2.9362121374138805 0.9417081474617064 1.3704734247116288 0.4166008038426794 0.20549327224168523 0.2866256200582868 4.823799324649475 0.1669652599630834 0.05953400259216689 3.133518660369352e-08 7.503967714695841 0.4287652772499224 TFVLTPELS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 3 TFVLTPELSPGK 12 0 Q96DY7 Q96DY7 MTBP Mdm2-binding protein 1 TFVLT(0.035)PELS(0.965)PGK;TFVLTPELS(1)PGK;TFVLTPELS(1)PGK 162.93 3.3731e-06 1354420000.0 1730400.0 1924970.0 1362530.0 1398140.0 1459120.0 1919660.0 1540510.0 1935990.0 1908700.0 1942600.0 True False 1634411.2625331203 1832491.5517611245 1450360.863925079 1531018.8052338809 1573944.442742853 1907678.6898782775 1696239.7847287522 1929274.5025534607 1562128.1944114333 1925390.0753199318 0.848872799067243 0.9517508037723884 0.7532815726621424 0.7951733131165536 0.8174678279056357 0.9908011443142443 0.8809850047902096 1.002017475462931 0.8113307606781254 1.0 20.876719328232753 -6.2460915648734385 24.76162537463056 0.933650353386089 0.8333246963140302 0.33843690511126856 0.07242833295803856 889.331926594362 1434817.5068894317 0.023640254786847198 0.023552069151226353 5.674249592370105e-07 6.2460915648734385 -0.10032565707205887 TFVLTPELS(ph)PGKLQVLPFEK ddPTM_KYSE-520_SHP099_60min_R1 3 TFVLTPELSPGKLQVLPFEK 20 1 Q96DY7 Q96DY7 MTBP Mdm2-binding protein 1 TFVLT(0.09)PELS(0.91)PGKLQVLPFEK;TFVLTPELS(1)PGKLQVLPFEK;TFVLTPELS(1)PGKLQVLPFEK 197.33 2.2856e-13 1272827000.0 1141510.0 1590747.0 1174681.0 881263.0 1081158.0 1341072.0 793372.0 1121354.0 1505696.0 969669.0 True False 1078188.1647562298 1514325.1263600732 1250402.8168160543 965017.970558617 1166238.9836524609 1332701.8722025987 873573.7843245555 1117464.284699992 1232299.5619073277 961078.4870510657 1.1218523557472384 1.5756518814676284 1.301041313132229 1.0040990237120375 1.213469034387505 1.3866732948021834 0.9089515540036631 1.162719070040548 1.282204917195125 1.0 19.874294728802752 -1.0000005831537893 0.10744939618495339 0.93901381168898 2.151065201280976 0.14890842729092169 0.17589092676669602 204.54375527634852 1.5435947293191767 1.7952339502994412 36.69442141332259 0.09999986572396795 1.0000005831537893 1.2120513895919958 TFVNITPAEVGVLVGK ddPTM_KYSE-520_SHP099_60min_R1 4 TFVNITPAEVGVLVGK 16 0 P07737;I3L3D5 P07737 PFN1 Profilin-1 0 ;;; 223.72 6.5286e-14 103455500.0 264330.0 361398.0 420745.0 350781.0 392027.0 347815.0 326471.0 315809.0 427059.0 282586.0 False True 249667.0879712086 344035.89761054306 447866.89591580204 384119.12077384663 422877.29457149055 345644.15756957635 359473.874729914 314713.5322893747 349515.8508813082 280082.5078885811 0.891405499948351 1.2283376787935758 1.599053433547399 1.3714498762152334 1.5098311485403948 1.2340797723329304 1.283457069275156 1.1236457951689367 1.247903175089921 1.0 18.095492359418625 -7.851983065010493 0.8289405514081777 1.0170600389439748 1.3256279597602323 0.18487946908894404 0.1834767638847564 1.0078838773442438 1.5565095936813687 0.18436967242873395 0.06891184967412811 1.4061023529737515e-08 7.851983065010493 0.3085679208162575 TFWS(ph)PELK ddPTM_KYSE-520_SHP099_60min_R1 10 TFWSPELK 8 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EPP6;O15083 X6RM00 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 1 T(0.012)FWS(0.988)PELK;TFWS(1)PELK;TFWS(1)PELK;TFWS(1)PELK;TFWS(1)PELK;TFWS(1)PELK;TFWS(1)PELK;TFWS(1)PELK;TFWS(1)PELK;TFWS(1)PELK 206.73 3.4450000000000005e-07 14799140000.0 17240700.0 15086910.0 13224240.0 14073930.0 14951510.0 15447060.0 15136230.0 15891670.0 16604520.0 14834720.0 True False 16284324.002516635 14362112.197686417 14076695.669932121 15411512.075718645 16128108.774545077 15350649.168744037 16666347.843769189 15836545.505913662 13589557.733886162 14703295.9220375 1.1075288213515084 0.9767954255861971 0.9573836876148142 1.0481671699621893 1.0969043172403303 1.0440277642604114 1.1335110122343004 1.077074527363462 0.9242524809364645 1.0 23.80963625310938 -4.214500823362739 20.93016242170118 1.0353568165841005 1.107531139450081 0.11886135732665137 0.0620528202786491 9713.750948379988 4330565.147250404 0.016299282354560664 6.095795556108226 6.1023789971625226e-05 4.214500823362739 0.07217432286598058 TFWS(ph)PELKK ddPTM_KYSE-520_SHP099_60min_R1 5 TFWSPELKK 9 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EPP6;O15083 X6RM00 ERC1;ERC2 ELKS/Rab6-interacting/CAST family member 1;ERC protein 2 1 T(0.002)FWS(0.998)PELKK;T(0.006)FWS(0.994)PELKK;T(0.009)FWS(0.991)PELKK;T(0.001)FWS(0.999)PELKK;TFWS(1)PELKK 133.91 0.00053778 11385211000.0 11573830.0 10240540.0 9640140.0 9590160.0 9611890.0 9161990.0 8944790.0 9193900.0 12007700.0 8793460.0 True False 10931806.578041892 9748569.087036088 10261558.849169359 10501605.923013268 10368291.058826955 9104806.621942366 9849016.665937847 9162008.5067724 9827404.369484033 8715556.785608351 1.2542866562573656 1.118525107097404 1.1773841994941572 1.204926567669681 1.1896303717448893 1.0446614996504604 1.1300501973896988 1.0512246930570468 1.127570459492804 1.0 23.0551614019112 -6.251880754550157 24.7331166667544 1.077612214893673 1.1852830389705173 0.6038077773280708 0.04768286575760613 426.3703875280925 1103241.4262211793 0.014968666577863632 0.014764879962149218 5.599113168064512e-07 6.251880754550157 0.10767082407684425 TGADTTAAGPLFQQRPYPS(ph)PGAVLR ddPTM_KYSE-520_SHP099_60min_R1 3 TGADTTAAGPLFQQRPYPSPGAVLR 25 1 H7C053;O60828-5;O60828-4;O60828-2;O60828 H7C053 PQBP1 Polyglutamine-binding protein 1 1 TGADTTAAGPLFQQRPYPS(1)PGAVLR;TGADTTAAGPLFQQRPYPS(1)PGAVLR;TGADTTAAGPLFQQRPYPS(1)PGAVLR 230.85 1.8936999999999999e-22 1618210000.0 658560.0 811320.0 593250.0 488290.0 533160.0 666000.0 494950.0 623170.0 717590.0 667310.0 True False 622028.3639931882 772342.9693838522 631491.8442335618 534696.9347902585 575116.6587345654 661843.2469598441 544984.3762465006 621008.3687189721 587293.7449718138 661398.152559324 0.9404749039382831 1.167742858662698 0.9547831994842474 0.8084342732455682 0.8695468176152493 1.0006729598484632 0.8239883557848589 0.9389327235280882 0.8879579459048104 1.0 19.335159490184733 -4.9893729625880905 24.615547512614338 0.8994214412525827 1.0558975050728334 0.3583654695070211 0.07921713065137988 164.76164434283075 381632.07151846786 0.01943834683640783 0.04040022371417046 1.0247714969442634e-05 4.9893729625880905 0.1564760638202507 TGDEKDVS(ph)V ddPTM_KYSE-520_SHP099_60min_R1 3 TGDEKDVSV 9 1 Q16543;K7EL68 Q16543 CDC37 Hsp90 co-chaperone Cdc37;Hsp90 co-chaperone Cdc37, N-terminally processed 1 TGDEKDVS(1)V;TGDEKDVS(1)V;TGDEKDVS(1)V 83.182 0.011202 1187540000.0 3749910.0 3560270.0 3237810.0 3160390.0 3443810.0 3162160.0 2983290.0 3031340.0 4114070.0 3145870.0 True False 3541895.0170397414 3389229.285125784 3446524.4132791725 3460752.5153941014 3714818.254401464 3142423.7864963035 3284870.067304623 3020824.989060076 3367058.595264972 3118000.0392498216 1.135950921248836 1.086988211180786 1.1053638133078383 1.109927027527153 1.1914105861574122 1.007833145265886 1.053518289273322 0.968834172877969 1.079877662886455 1.0 21.57218951552072 -6.283264992801707 24.978639749447886 1.0220338832371518 1.1217333770453548 0.6494163144989782 0.0381132103161727 512.1394294250143 586123.1484059916 0.012977727706984174 0.011454351116527338 5.208767915251643e-07 6.283264992801707 0.09969949380820298 TGDLGIPPNPEDRS(ph)PS(ph)PEPIYNSEGK ddPTM_KYSE-520_SHP099_60min_R1 14 TGDLGIPPNPEDRSPSPEPIYNSEGK 26 1 Q15637-5;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-6 Q15637-5;Q15637-6 SF1 Splicing factor 1 2 TGDLGIPPNPEDRS(0.999)PS(0.993)PEPIY(0.006)NS(0.002)EGK;TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK;TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK;TGDLGIPPNPEDRS(1)PS(0.998)PEPIY(0.002)NSEGK;TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK;TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK;TGDLGIPPNPEDRS(1)PS(0.998)PEPIY(0.002)NSEGK;TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK;TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK;TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK;TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK;TGDLGIPPNPEDRS(1)PS(0.998)PEPIY(0.001)NS(0.001)EGK;TGDLGIPPNPEDRS(1)PS(1)PEPIY(0.001)NSEGK;TGDLGIPPNPEDRS(1)PS(1)PEPIYNSEGK 209.4 1.4604e-21 77309740000.0 39380880.0 35569590.0 34412010.0 34705410.0 35960360.0 36893080.0 34511440.0 35869480.0 42563270.0 35895670.0 True False 37196344.082562 33860773.50535694 36630263.22576276 38003801.731837966 38790235.74554009 36662816.60292683 38000193.15439647 35745057.14587955 34834853.10072111 35577662.29020866 1.0454971374777149 0.9517425071145209 1.0295860061565594 1.0681927728089375 1.090297485796743 1.0305010009895117 1.0680913446315587 1.004705054938839 0.9791214728098654 1.0 25.084468382429797 -9.787403869058878 7.731680196448211 1.0000004111509426 1.0307741334547473 0.046472602787615114 0.04018408087658312 6.33386818799811e-11 0.0 0.04160221133404345 0.010090018328795847 1.6315340087794368e-10 9.787403869058878 0.030773722303804707 TGDLGIPPNPEDRS(ph)PS(ph)PEPIYNSEGKR ddPTM_KYSE-520_SHP099_60min_R1 12 TGDLGIPPNPEDRSPSPEPIYNSEGKR 27 2 Q15637-5;Q15637-4;Q15637-7;Q15637-3;Q15637-2;Q15637;Q15637-6 Q15637-5;Q15637-6 SF1 Splicing factor 1 2 TGDLGIPPNPEDRS(1)PS(0.997)PEPIY(0.001)NS(0.003)EGKR;TGDLGIPPNPEDRS(0.994)PS(0.94)PEPIY(0.045)NS(0.021)EGKR;TGDLGIPPNPEDRS(0.985)PS(0.92)PEPIY(0.046)NS(0.049)EGKR;TGDLGIPPNPEDRS(0.989)PS(0.983)PEPIY(0.011)NS(0.017)EGKR;TGDLGIPPNPEDRS(0.931)PS(0.941)PEPIY(0.054)NS(0.074)EGKR;TGDLGIPPNPEDRS(0.997)PS(0.966)PEPIY(0.001)NS(0.036)EGKR;TGDLGIPPNPEDRS(0.996)PS(0.968)PEPIY(0.007)NS(0.029)EGKR;TGDLGIPPNPEDRS(0.951)PS(0.852)PEPIY(0.048)NS(0.149)EGKR;TGDLGIPPNPEDRS(1)PS(0.999)PEPIY(0.001)NS(0.001)EGKR;TGDLGIPPNPEDRS(0.646)PS(0.641)PEPIY(0.155)NS(0.558)EGKR;T(0.002)GDLGIPPNPEDRS(0.782)PS(0.672)PEPIY(0.123)NS(0.421)EGKR;TGDLGIPPNPEDRS(0.975)PS(0.629)PEPIY(0.081)NS(0.315)EGKR 109.71 0.00029641 11524370000.0 4597498.0 4797008.0 4868318.0 3811038.0 3979872.0 3891210.0 3198954.0 3441865.0 5875050.0 3622034.0 True False 4342465.621054954 4566552.5352241965 5182137.567864212 4173237.905689647 4293065.284025913 3866923.515018941 3522335.48910243 3429925.9736523316 4808289.0179582415 3589945.5966598107 1.209618782272163 1.272039481454273 1.4435142339443314 1.1624794285385684 1.1958580341775389 1.0771537926972594 0.9811668155583508 0.9554256133696383 1.3393765695034523 1.0 21.775530550413222 -5.859123325797442 1.6984340475831072 1.0637319977407451 1.2983257908280286 0.4019120670717282 0.1185602137477574 0.3556761918602775 2.1164484489120983 0.043788352605479704 0.054028608311045376 1.3831735459754118e-06 5.859123325797442 0.23459379308728345 TGEDEDEEDNDALLKENES(ph)PDVR ddPTM_KYSE-520_SHP099_60min_R1 4 TGEDEDEEDNDALLKENESPDVR 23 1 A0A087WWS1;Q96FV9 A0A087WWS1 THOC1 THO complex subunit 1 1 TGEDEDEEDNDALLKENES(1)PDVR;TGEDEDEEDNDALLKENES(1)PDVR;TGEDEDEEDNDALLKENES(1)PDVR;TGEDEDEEDNDALLKENES(1)PDVR 256.97 1.8989e-37 3174150000.0 5197420.0 4497950.0 3994730.0 4537650.0 4916240.0 4848550.0 4863690.0 5008420.0 5094080.0 4381830.0 True False 4909108.751800103 4281861.730439409 4252236.687593993 4968906.891705779 5303120.118420784 4818288.4009717 5355359.250240102 4991046.959994016 4169123.483306643 4343010.395212159 1.130346995533795 0.9859202122011586 0.9790988969959094 1.1441158181853823 1.221070095587861 1.1094351526958122 1.2330984185863294 1.1492136803301851 0.9599616634357558 1.0 22.050263975282704 -3.9141587808717855 20.11415312560189 1.0970012113050953 2.907438242923849 0.00826143564162063 0.0966669983224936 4089.1306396871764 906496.7008438944 0.02477402107584196 18146.75338361187 0.00012185440099026336 3.9141587808717855 1.8104370316187537 TGEMSGPVFTDS(ph)GIHIILR ddPTM_KYSE-520_SHP099_60min_R1 1 TGEMSGPVFTDSGIHIILR 19 0 K7EN45;Q13526 K7EN45 PIN1 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 1 TGEMSGPVFT(0.001)DS(0.999)GIHIILR 191.8 5.0455e-13 56119000.0 77456.0 72936.0 66138.0 56353.0 70910.0 61116.0 54860.0 58661.0 89567.0 55067.0 True False 73159.36127529206 69432.045080832 70401.36130454163 61708.77217685274 76490.21357729024 60734.55237417089 60405.784182004245 58457.51868258034 73303.89060032947 54579.1492214777 1.340426927111256 1.272134983253082 1.2898948098083884 1.1306290599445517 1.401454853517398 1.112779389940929 1.1067556941366479 1.071059544101073 1.343074995597097 1.0 15.736062285639674 -6.293264357321119 24.938513594595324 1.129926481108401 1.2775711709071116 0.3715128969589949 0.10376937721580824 758.4992920768647 594368.5988184259 0.035168702450175594 0.031018427667279642 5.09020933033813e-07 6.293264357321119 0.14764468979871048 TGENFR ddPTM_KYSE-520_SHP099_60min_R1 2 TGENFR 6 0 P62701 P62701 RPS4X 40S ribosomal protein S4, X isoform 0 ; 123.99 0.05914199999999999 952580000.0 1270780.0 1330720.0 893500.0 862250.0 1186440.0 1267380.0 910290.0 1076630.0 1076870.0 1106960.0 False True 1200287.3001628758 1266790.2137485566 951096.4396505469 944197.9807550847 1279806.0780798239 1259469.8113092608 1002310.9967742728 1072895.4218173323 881337.5536835759 1097153.1956018473 1.0940015532693719 1.154615616877144 0.8668766070802169 0.860589008481301 1.166478923098594 1.1479434379429339 0.9135561020942491 0.9778902582777346 0.803294888276851 1.0 20.065333552771946 -6.801284086155833 24.915957536773256 0.9218426449111614 1.041821693416492 0.22310146093056116 0.11360884452768523 272.39692322193326 170334.62316394958 0.051299297763977465 0.03458653491153541 1.5802140316880301e-07 6.801284086155833 0.11997904850533048 TGEPS(ph)PPHDILHEPPDVVS(ph)DDEKDHGK ddPTM_KYSE-520_SHP099_60min_R1 8 TGEPSPPHDILHEPPDVVSDDEKDHGK 27 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 2 T(0.023)GEPS(0.977)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.01)GEPS(0.99)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.158)GEPS(0.842)PPHDILHEPPDVVS(1)DDEKDHGK;TGEPS(1)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.016)GEPS(0.984)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.101)GEPS(0.899)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.124)GEPS(0.876)PPHDILHEPPDVVS(1)DDEKDHGK;T(0.067)GEPS(0.933)PPHDILHEPPDVVS(1)DDEKDHGK 257.88 1.2179e-40 11454090000.0 5217110.0 4803080.0 4313170.0 4461780.0 4792650.0 4601140.0 4378430.0 4679500.0 5689960.0 4336450.0 True False 4927706.508249058 4572332.827229939 4591203.8395160055 4885826.229716932 5169804.2885516845 4572422.578553781 4821044.433758892 4663267.906703505 4656806.696219039 4298032.42670705 1.1465028689940422 1.0638199932644634 1.0682106098100264 1.1367588106961357 1.2028304524711428 1.0638408752204218 1.1216863799821422 1.0849773672545977 1.0834740722947187 1.0 22.03524493661127 -8.334769548596416 0.8942049659433188 0.9999356836236425 1.1141736503716781 0.40963903200343155 0.041094935723703145 1.2267407982936294 1.80457094914115 0.041946742215785274 0.014094411354831504 4.626264415830881e-09 8.334769548596416 0.11423796674803566 TGEPS(ph)PPHDILHEPPDVVS(ph)DDEKDHGKK ddPTM_KYSE-520_SHP099_60min_R1 2 TGEPSPPHDILHEPPDVVSDDEKDHGKK 28 2 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 2 T(0.011)GEPS(0.989)PPHDILHEPPDVVS(1)DDEKDHGKK;T(0.118)GEPS(0.882)PPHDILHEPPDVVS(1)DDEKDHGKK 109.49 0.00024208 3454560000.0 1526920.0 1334060.0 1269930.0 1440180.0 1330980.0 1301270.0 1268270.0 1433960.0 1744450.0 1136220.0 True False 1442218.7037604428 1269969.7551351145 1351791.7197598426 1577054.274194096 1435720.5537597185 1293148.2912484037 1396479.1087223934 1428985.9274487807 1427701.8540058832 1126153.9747657843 1.280658538776097 1.127705254869114 1.2003613626999683 1.400389564421765 1.2748883242705042 1.148287285952483 1.2400427827933838 1.2689081239943045 1.26776789497441 1.0 20.102972664454786 -6.2277039032684405 24.60454914660684 1.2052480253987181 1.2544702942862012 0.10127771519856665 0.09794672310586683 1826.986451183092 1332489.2361029652 0.033031674901562814 0.033029743572373586 5.919650912721517e-07 6.2277039032684405 0.049222268887483045 TGEPSPPHDILHEPPDVVS(ph)DDEKDHGK ddPTM_KYSE-520_SHP099_60min_R1 5 TGEPSPPHDILHEPPDVVSDDEKDHGK 27 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 TGEPSPPHDILHEPPDVVS(1)DDEKDHGK;TGEPSPPHDILHEPPDVVS(1)DDEKDHGK;TGEPSPPHDILHEPPDVVS(1)DDEKDHGK;TGEPSPPHDILHEPPDVVS(1)DDEKDHGK;TGEPSPPHDILHEPPDVVS(1)DDEKDHGK 254.01 7.478599999999999e-32 4851290000.0 2458690.0 2285340.0 2202140.0 2724000.0 2569660.0 2172150.0 2285620.0 2408640.0 2912640.0 2069050.0 True False 2322301.564422999 2175548.8360347245 2344093.4679485797 2982888.140999534 2771877.6226346046 2158592.8061318714 2516672.7751015783 2400284.990020801 2383777.9976793188 2050719.8266965423 1.1324323948064332 1.0608708258013315 1.1430588603244873 1.454556640145524 1.3516608102920422 1.0526024950024984 1.227214338272444 1.1704597374900134 1.1624103725174844 1.0 20.967698970822173 -8.53178373811332 0.844958655513708 0.9987315882696792 1.2073201717325421 0.20782361595979382 0.11731275012632862 3.3076725309651174 3.631973532051358 0.13442099522156487 0.04325588246890927 2.939112852362927e-09 8.53178373811332 0.2085885834628629 TGEPSPPHDILHEPPDVVS(ph)DDEKDHGKK ddPTM_KYSE-520_SHP099_60min_R1 1 TGEPSPPHDILHEPPDVVSDDEKDHGKK 28 2 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 TGEPSPPHDILHEPPDVVS(1)DDEKDHGKK 202.76 1.3722e-15 612090000.0 770490.0 793350.0 763510.0 1053700.0 867190.0 762720.0 753800.0 798410.0 1006100.0 565580.0 True False 727749.3837662648 755236.2751573715 812727.076259193 1153843.3311935442 935432.9193638451 757959.5815633822 830001.4603790512 795640.5020602952 823417.6017170554 560569.4012145823 1.298232443992581 1.3472663215669742 1.4498241867969643 2.0583416231665854 1.6687191939785662 1.3521244290557348 1.4806399681835865 1.4193434396104851 1.4688950198369044 1.0 19.096533471178283 -8.80453849790437 0.6465731006423903 0.9814052636257412 1.5393777171272884 0.3543596807199254 0.20730630555914684 3.8344543512467038 2.1368586743740954 0.4147643148566441 0.09052417788502432 1.5684168596747742e-09 8.80453849790437 0.5579724535015472 TGHGGPQFVADHPFLFLIMHK ddPTM_KYSE-520_SHP099_60min_R1 2 TGHGGPQFVADHPFLFLIMHK 21 0 P05120 P05120 SERPINB2 Plasminogen activator inhibitor 2 0 ; 94.973 0.00043796 57846000.0 103125.0 118727.0 75297.0 76601.0 97731.0 95469.0 65085.0 53732.0 47639.0 37529.0 False True 97404.45067540926 113023.17670713966 80150.7650994597 83881.13600906955 105421.87368667539 94873.14255857254 71664.4269683876 53545.61623314308 38988.958481461894 37196.5222571202 2.618644022742314 3.0385415046565174 2.154791906227662 2.255080069831338 2.834186297255126 2.550591743571183 1.9266432080130693 1.4395328644707723 1.0481882744830688 1.0 15.18288012031959 -7.169541869689319 1.5526087602970104 1.0242745372885151 2.586245656010541 0.8717002471953127 0.24555593718292612 0.14716659409029836 0.6541087907762265 0.19766026879548074 0.08226584018890001 6.767965408198508e-08 7.169541869689319 1.5619711187220258 up TGHILHPEYLQPLPSTPVS(ph)PIELDAK ddPTM_KYSE-520_SHP099_60min_R1 1 TGHILHPEYLQPLPSTPVSPIELDAK 26 0 Q96F45-3;Q96F45-2;Q96F45 Q96F45-3 ZNF503 Zinc finger protein 503 1 TGHILHPEYLQPLPS(0.012)T(0.004)PVS(0.985)PIELDAK 100.68 0.0018164000000000001 81147000.0 41518.0 48781.0 45454.0 52612.0 43952.0 53579.0 51899.0 61496.0 80780.0 66996.0 True False 39214.91377591889 46437.487538226254 48384.037568971384 57612.22866162543 47410.77234732844 53244.59358687909 57145.45740542902 61282.68472927431 66112.38829808537 66402.46756209925 0.590564104251778 0.6993337633845934 0.7286481865108835 0.8676218034781127 0.7139911224381854 0.8018466111531928 0.8605923771128969 0.9228977021367927 0.995631498727926 1.0 16.018949233673727 -3.1038998330640277 0.1693795383038137 1.06804397793117 1.5196962213824224e-20 0.8340717285590273 0.05229688034794591 12.371307626974307 0.2520679257165167 0.16777385214732665 2.9637779399432 0.0007872273371489246 3.1038998330640277 -1.06804397793117 TGIPS(ph)GDELDSFETNTEPDFNISR ddPTM_KYSE-520_SHP099_60min_R1 1 TGIPSGDELDSFETNTEPDFNISR 24 0 Q8N1W1-5;Q8N1W1-4;Q8N1W1-3;Q8N1W1;Q8N1W1-6;Q8N1W1-2 Q8N1W1-5 ARHGEF28 Rho guanine nucleotide exchange factor 28 1 T(0.023)GIPS(0.951)GDELDS(0.026)FETNTEPDFNISR 74.584 0.010355 21861000.0 26575.0 30767.0 23645.0 21533.0 22024.0 25673.0 23585.0 21027.0 24495.0 21386.0 True False 25100.831774050886 29288.90713779147 25169.194533337624 23579.489845867494 23757.163500581573 25512.765284084177 25969.201967418332 20954.062244738685 20047.325468700197 21196.53667805624 1.1841949538877536 1.3817779565900912 1.187420139224635 1.1124218170168436 1.120804019138477 1.2036289546535364 1.2251625046983738 0.988560657950854 0.9457830669787783 1.0 14.371540940301893 -7.277103074578628 9.297270373078709 0.9750294918434241 1.2020339421004644 0.6797635778238563 0.07047382297578074 0.19172194390959604 104.62650318986681 0.04106614748166631 0.020505809169336645 5.2831984652454565e-08 7.277103074578628 0.2270044502570403 TGLLFS(ph)PDVDEKLPK ddPTM_KYSE-520_SHP099_60min_R1 3 TGLLFSPDVDEKLPK 15 1 Q6P4F7-3;Q6P4F7;H3BQ41;H3BR51;Q6P4F7-2 Q6P4F7-3 ARHGAP11A Rho GTPase-activating protein 11A 1 TGLLFS(1)PDVDEKLPK;TGLLFS(1)PDVDEKLPK;TGLLFS(1)PDVDEKLPK 169.28 2.2264e-08 1150754000.0 1257520.0 1374430.0 1208950.0 935429.0 1066579.0 1163110.0 909770.0 1113430.0 1493350.0 1232900.0 True False 1187762.8587960296 1308400.3197385115 1286880.8513883916 1024331.8909130151 1150512.699295622 1155850.5990562534 1001738.4300995636 1109567.771206515 1222195.2842899968 1221977.4651816867 0.9720006241026957 1.0707237711163318 1.0531134067984265 0.8382575948409285 0.9415171163770691 0.9458853636751793 0.8197683334124517 0.9080100106768676 1.0001782513299275 1.0 20.220786249595058 -5.2421477141109625 24.753244752718164 0.9156679495324963 1.0358237342417487 0.4062226428941559 0.06055843611508567 662.4369699176633 849975.115873756 0.016239588459690528 0.028071165241800134 5.726012422591297e-06 5.2421477141109625 0.12015578470925237 TGLSLWDT(ph)SPSYIDK ddPTM_KYSE-520_SHP099_60min_R1 4 TGLSLWDTSPSYIDK 15 0 E7EPP6;O14757-2;O14757-3;O14757 E7EPP6 CHEK1 Serine/threonine-protein kinase Chk1 1 TGLSLWDT(0.725)S(0.273)PS(0.002)YIDK;TGLSLWDT(0.721)S(0.277)PS(0.003)YIDK;TGLSLWDT(0.672)S(0.327)PSYIDK;TGLSLWDT(0.685)S(0.315)PS(0.001)YIDK 258.36 3.0144000000000003e-24 1017220000.0 2946910.0 2909160.0 2672160.0 2396630.0 2570140.0 2964910.0 2583930.0 2713890.0 3560940.0 2932510.0 True False 2783439.02778056 2769399.586861814 2844411.709207171 2624404.9946269183 2772395.3959037787 2946404.896912475 2845138.8611266194 2704476.1490166904 2914363.059992376 2906530.242858259 0.9576501172213325 0.9528198076268451 0.9786279417516052 0.9029340056156095 0.9538505242517026 1.0137189881826254 0.9788781204384552 0.9304827141097042 1.0026949030216916 1.0 21.470866489418018 -6.026201703252354 24.674427148762856 0.9807919227075402 0.9477704943213564 0.2954923370402389 0.027483007157984782 925.7552858229558 871792.1001998212 0.009189347199714532 0.009223467721188275 9.414522479214673e-07 6.026201703252354 -0.033021428386183826 TGLSLWDTSPS(ph)YIDK ddPTM_KYSE-520_SHP099_60min_R1 1 TGLSLWDTSPSYIDK 15 0 E7EPP6;O14757-2;O14757-3;O14757 E7EPP6 CHEK1 Serine/threonine-protein kinase Chk1 1 TGLSLWDT(0.273)S(0.273)PS(0.398)Y(0.056)IDK 122.7 0.00090683 35396000.0 435790.0 451770.0 412490.0 375470.0 394840.0 480670.0 421100.0 434890.0 534320.0 476700.0 True False 411615.859974173 430066.2910794049 439079.765407335 411154.5559108281 425911.6616677099 477669.9602345167 463668.89753995603 433381.4680940893 437300.95711108 472476.80886698834 0.8711874366092984 0.910237884713781 0.9293149571938984 0.8702110837922128 0.9014445866434314 1.010991336019183 0.9813580028443006 0.9172544767506141 0.9255500987651416 1.0 18.849883992016665 -6.144012223017609 8.651547436740598 0.9626795445533111 0.8972063652984071 0.5496348629991865 0.0318247495710403 0.2863512286923191 19.479393030818493 0.011125804504971457 0.011133446327964595 7.177740895668413e-07 6.144012223017609 -0.06547317925490392 TGLYNYYDDEKEK ddPTM_KYSE-520_SHP099_60min_R1 4 TGLYNYYDDEKEK 13 1 P50454;E9PR70;E9PPV6;E9PKH2 P50454 SERPINH1 Serpin H1 0 ;;; 173.44 5.452e-07 3146840000.0 2126840.0 1813320.0 1087675.0 1007370.0 1777180.0 1816490.0 1517220.0 1422680.0 1537410.0 1601350.0 False True 2008859.9454495711 1726205.385351188 1157788.2708415315 1103110.141923165 1917033.955229004 1805152.612117249 1670595.4042402555 1417745.0551360094 1258255.0989522098 1587163.284831449 1.2656920460851668 1.0876041563263006 0.729470169771779 0.6950199468861273 1.2078366312717383 1.13734524315748 1.0525668154034111 0.8932572147336238 0.7927697868123456 1.0 20.598019127301065 -4.524107483200388 24.960956465913743 0.944263241867134 1.2211701591595923 0.28843669102027725 0.16043073431542645 46.73934064985145 949506.3709632097 0.04514901353891463 0.12159552006846962 2.991524175014229e-05 4.524107483200388 0.2769069172924583 TGPNLHGLFGR ddPTM_KYSE-520_SHP099_60min_R1 4 TGPNLHGLFGR 11 0 P99999;C9JFR7;CON__P62894 P99999 CYCS Cytochrome c 0 ;;; 138.63 0.00017255 3183240000.0 2711030.0 2759060.0 2262030.0 4492930.0 2772940.0 2751980.0 3384410.0 2868210.0 3486760.0 1715881.0 False True 2560643.761595682 2626510.6161665097 2407844.0731759686 4919936.7163513405 2991154.6021296177 2734803.8720248477 3726539.191458565 2858260.8489552485 2853652.2780667525 1700679.6292752174 1.505659100936581 1.5443888260635283 1.4158128501851492 2.892923882699813 1.7587995708541326 1.608065284577052 2.1912058728231565 1.6806580144511758 1.6779481737444577 1.0 20.697679963831018 -8.309609400234603 1.5788952040833792 1.00121879682132 1.8436103022876271 0.26542682217865043 0.4112410104097538 1.7027564840602658 6.561301600297999 0.4053507918180655 0.11665295199802392 4.9021951929824065e-09 8.309609400234603 0.8423915054663071 TGPNLHGLFGRK ddPTM_KYSE-520_SHP099_60min_R1 2 TGPNLHGLFGRK 12 1 P99999;C9JFR7;CON__P62894 P99999 CYCS Cytochrome c 0 ; 142.97 6.251600000000001e-05 1371180000.0 2372000.0 2514100.0 1656780.0 4701900.0 2087260.0 2540500.0 3111000.0 2966000.0 2726700.0 1050330.0 False True 2240420.431535232 2393318.862258965 1763578.689741729 5148767.162322219 2251515.487115143 2524643.7971493714 3425490.240434112 2955711.638269604 2231600.014513363 1041024.8933443751 2.152129546429676 2.2990025287197873 1.6940792684371768 4.945863634232027 2.162787366094552 2.425152187320663 3.290497914444152 2.839232430623389 2.1436567259637482 1.0 19.989573136592714 -8.082503525520442 3.1714524411736074 1.0017541066641407 2.7385488901257813 0.27686922431136785 0.8516118165841616 0.466986284444596 10.923159364290823 0.8193925489367455 0.21803753946160162 8.269827952508036e-09 8.082503525520442 1.7367947834616406 TGPPPIS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 5 TGPPPISPSK 10 0 G5E9M7;Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;F8W708;E7EWF5;E7EQU6;E7ERW0;F8WBN7;E7EUJ2;A0A096LP98 G5E9M7 VGLL4 Transcription cofactor vestigial-like protein 4 1 TGPPPIS(0.998)PS(0.002)K;TGPPPIS(0.852)PS(0.148)K;TGPPPIS(0.915)PS(0.085)K;TGPPPIS(0.86)PS(0.14)K;TGPPPIS(0.978)PS(0.022)K 138.45 0.00025925 4770080000.0 4517400.0 5458260.0 3536880.0 3022860.0 3189480.0 4614720.0 3418500.0 4598160.0 5452050.0 4758270.0 True False 4266810.816786361 5196036.996584712 3764872.9440080915 3310151.7055440038 3440473.930341214 4585917.820736529 3764075.341344903 4582210.05617861 4462095.154996001 4716115.42967804 0.9047299372563593 1.1017620484618704 0.7982995751792089 0.7018809770247675 0.7295143602064228 0.9723930402292128 0.7981304523756896 0.9716068498542727 0.9461378164996738 1.0 22.16916759887724 -7.283279563761966 23.187071489232256 0.9691543208719116 0.8586146644967435 0.18118681275893733 0.11144891663017416 674.3938658338965 715975.554853925 0.0665542347231365 0.032031541861805936 5.208593159457428e-08 7.283279563761966 -0.11053965637516805 TGPPPIS(ph)PSKR ddPTM_KYSE-520_SHP099_60min_R1 5 TGPPPISPSKR 11 1 G5E9M7;Q14135-4;Q14135;Q14135-2;A0A0A6YYI5;A0A075B6E4;F8W708;E7EWF5;E7EQU6;E7ERW0;F8WBN7;E7EUJ2;A0A096LP98 G5E9M7 VGLL4 Transcription cofactor vestigial-like protein 4 1 TGPPPIS(0.89)PS(0.11)KR;T(0.018)GPPPIS(0.96)PS(0.022)KR;TGPPPIS(0.982)PS(0.018)KR;TGPPPIS(0.794)PS(0.206)KR;TGPPPIS(0.5)PS(0.5)KR 166.71 1.668e-05 2483280000.0 2339450.0 2315750.0 1922730.0 1574320.0 1754140.0 2148070.0 1778300.0 2283150.0 2662040.0 2189450.0 True False 2209676.0449220473 2204497.893988385 2046672.2522767724 1723942.8994634328 1892180.8383086727 2134663.0983438888 1958067.9185355117 2275230.285541215 2178680.6405674107 2170053.1763663264 1.0182589389915633 1.0158727527957332 0.9431438245692436 0.7944242649159922 0.8719513691720031 0.9836916079256192 0.9023133349267615 1.048467526197217 1.0039756925291254 1.0 21.04929896514601 -7.261275228222425 24.999999387658228 1.019666209379207 0.9306943107988529 0.26248735932695544 0.06494216218861894 22.173080483983785 3377616.624597794 0.036629984465820456 0.019418728519081028 5.479296119264791e-08 7.261275228222425 -0.08897189858035415 TGQAGS(ph)LS(ph)GSPKPFSPQLSAPITTK ddPTM_KYSE-520_SHP099_60min_R1 1 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 2 T(0.021)GQAGS(0.913)LS(0.529)GS(0.535)PKPFS(0.001)PQLSAPITTK 66.31 0.016541 275010000.0 820840.0 692720.0 653120.0 707880.0 689070.0 643710.0 647760.0 703110.0 863850.0 678020.0 True False 775306.3688960274 659440.6914060824 695221.1602289476 775156.7023681167 743295.8887280134 639692.3671178989 713241.902328382 700671.0755171078 706996.615886371 672013.2702915776 1.1537069328402285 0.9812911746816545 1.0345348685261833 1.1534842191907708 1.1060732303775895 0.9519043676627769 1.061350919482462 1.042644701365936 1.0520575219885384 1.0 19.358130196718854 TGQAGS(ph)LSGS(ph)PKPFS(ph)PQLSAPITTK ddPTM_KYSE-520_SHP099_60min_R1 1 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 3 T(0.013)GQAGS(0.98)LS(0.413)GS(0.594)PKPFS(1)PQLSAPITTK 123.73 0.0011398 435790000.0 476970.0 486690.0 442460.0 404640.0 397820.0 387210.0 344770.0 433480.0 557250.0 401790.0 True False 450511.52328387793 463308.68186341686 470981.6795610307 443096.8639405483 429126.1707138285 384793.2787617433 379622.7162309443 431976.3590549931 456067.4471293399 398230.4531878903 1.1312834557916662 1.1634185134626602 1.1826862455916083 1.1126644393805047 1.0775825085163973 0.9662577928971012 0.9532739477657008 1.0847396415742747 1.1452349851159207 1.0 18.60324402443354 -5.746435803506791 2.4662579463915226 1.0305862627957056 1.157681560715996 0.5135943185431877 0.05440446495537981 0.2522537533653605 3.1437661293277865 0.019548241929501733 0.02502793509713617 1.792933560431319e-06 5.746435803506791 0.1270952979202904 TGQAGS(ph)LSGS(ph)PKPFSPQLSAPITTK ddPTM_KYSE-520_SHP099_60min_R1 1 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 2 T(0.002)GQAGS(0.987)LS(0.282)GS(0.729)PKPFSPQLSAPITTK 124.37 0.00010632 184050000.0 516180.0 433520.0 436910.0 486060.0 459350.0 426150.0 460120.0 454990.0 494790.0 470640.0 True False 487546.4664206804 412693.04847321357 465073.91768071614 532254.9962607323 495498.2316560183 423490.23977768386 506633.4199384574 453411.7458854643 404948.60864087235 466470.4957523788 1.0451817871874358 0.8847141506936541 0.9970060741582164 1.141026069402843 1.0622284499619212 0.9078607192393352 1.0860996023366902 0.9720051965004737 0.8681119434739883 1.0 18.83142630797293 -7.522677235003478 24.998593208292412 0.9293901527790804 1.0151175307966016 0.15690080304081078 0.07848093544326688 13.984344856276584 1736179.7211573613 0.05291003342789424 0.020485489330167615 3.001392306665127e-08 7.522677235003478 0.08572737801752117 TGQAGSLSGS(ph)PKPFSPQLSAPITTK ddPTM_KYSE-520_SHP099_60min_R1 4 TGQAGSLSGSPKPFSPQLSAPITTK 25 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 TGQAGS(0.013)LS(0.065)GS(0.917)PKPFS(0.005)PQLSAPITTK;T(0.001)GQAGS(0.033)LS(0.253)GS(0.711)PKPFS(0.001)PQLSAPITTK;TGQAGSLS(0.287)GS(0.712)PKPFSPQLSAPITTK;TGQAGSLS(0.043)GS(0.957)PKPFSPQLSAPITTK 221.23 1.466e-21 14029380000.0 3999790.0 4584360.0 3410320.0 2617330.0 3080150.0 4301880.0 3224090.0 3955470.0 4641780.0 4011390.0 True False 3777913.675316317 4364120.464335354 3630154.6839049314 2866080.2562710443 3322540.281343822 4275030.371218634 3550012.481286144 3941749.3977836384 3798949.761751513 3975852.2054141993 0.9502148168816901 1.0976566126860607 0.9130507112315425 0.720871930895243 0.8356800277483363 1.0752488146810444 0.8928934723609295 0.991422516263527 0.9555057797616859 1.0 21.922832697834277 -6.246354846151403 24.912148401419756 0.9768454936833801 0.9046667616250099 0.14004050471419682 0.09791061051730392 2029.2043935593306 3351238.675280097 0.03607910255899642 0.03594046802386846 5.670810748431143e-07 6.246354846151403 -0.07217873205837022 TGQIWPNDGEGAFHGDADGS(ph)FGTPPGYGCAADR ddPTM_KYSE-520_SHP099_60min_R1 3 TGQIWPNDGEGAFHGDADGSFGTPPGYGCAADR 33 0 P11274;P11274-2 P11274 BCR Breakpoint cluster region protein 1 TGQIWPNDGEGAFHGDADGS(0.497)FGT(0.497)PPGY(0.005)GCAADR;TGQIWPNDGEGAFHGDADGS(0.459)FGT(0.459)PPGY(0.083)GCAADR;TGQIWPNDGEGAFHGDADGS(0.5)FGT(0.5)PPGYGCAADR 83.601 0.00064219 1189820000.0 954500.0 1085190.0 1034140.0 1032640.0 955160.0 1110710.0 955060.0 935160.0 1233170.0 997680.0 True False 901551.9822514234 1033055.8434966013 1100802.3190825025 1130781.7951254628 1030325.6578830138 1103777.6468930438 1051606.785287366 931916.1482279852 1009257.4136859359 988841.3313832938 0.9117256263856194 1.0447134547374306 1.1132244214980234 1.1435422036249314 1.0419524600996273 1.1162333246618696 1.0634737362932325 0.9424324395141577 1.0206464694129258 1.0 19.915379520405153 -7.193427190220581 8.984688994873403 0.986256060755326 1.0679796124506415 0.22592161208002792 0.062472754801224745 0.5833403285171687 73.4669014132621 0.03060191066093023 0.0176278467224887 6.405791661212918e-08 7.193427190220581 0.08172355169531553 TGQIWPNDGEGAFHGDADGSFGT(ph)PPGYGCAADR ddPTM_KYSE-520_SHP099_60min_R1 4 TGQIWPNDGEGAFHGDADGSFGTPPGYGCAADR 33 0 P11274;P11274-2 P11274 BCR Breakpoint cluster region protein 1 TGQIWPNDGEGAFHGDADGS(0.191)FGT(0.809)PPGYGCAADR;TGQIWPNDGEGAFHGDADGS(0.141)FGT(0.859)PPGYGCAADR;TGQIWPNDGEGAFHGDADGS(0.103)FGT(0.897)PPGYGCAADR;TGQIWPNDGEGAFHGDADGS(0.405)FGT(0.595)PPGYGCAADR 219.75 2.2426e-22 2925310000.0 1641470.0 1796810.0 1551530.0 1812280.0 1588250.0 1816760.0 1548460.0 1565140.0 1901450.0 1668990.0 True False 1550414.38691068 1710488.550533205 1651544.1063357734 1984518.5463181497 1713236.2390936557 1805420.9269470954 1704993.4483132735 1559710.8946464208 1556194.6116538085 1654204.0470545704 0.9372570389192945 1.034025127419349 0.9983920117209644 1.199681834808546 1.035686161053829 1.0914136802903955 1.0307032263336178 0.9428769669761107 0.9407513023709048 1.0 20.657705772102503 -7.157047030614185 4.468532477309513 0.9566872635001339 1.053072849631964 0.26613863897551626 0.06516946843868716 0.29563433970463504 9.731703170930087 0.033176086842048265 0.018445316303943533 6.965510791230527e-08 7.157047030614185 0.09638558613183001 TGQPAQPAPSAQQPPRPPAS(ph)PDEPSVAASSVGSSR ddPTM_KYSE-520_SHP099_60min_R1 4 TGQPAQPAPSAQQPPRPPASPDEPSVAASSVGSSR 35 1 O94964-2 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 TGQPAQPAPSAQQPPRPPAS(1)PDEPSVAASSVGSSR;TGQPAQPAPSAQQPPRPPAS(0.999)PDEPS(0.001)VAASSVGSSR;TGQPAQPAPSAQQPPRPPAS(1)PDEPSVAASSVGSSR;TGQPAQPAPSAQQPPRPPAS(1)PDEPSVAASSVGSSR 217.92 1.1453000000000002e-22 2281430000.0 791790.0 992200.0 644885.0 554910.0 610018.0 898390.0 667705.0 868110.0 932910.0 859970.0 True False 747867.8303057669 944533.2226774364 686455.3189524822 607648.4795602248 658022.946072366 892782.8147691502 735203.1375728234 865098.7290283977 763517.0607472998 852351.3348465357 0.877417327492564 1.1081501067250605 0.8053666262821976 0.7129084624119593 0.7720090521015512 1.047435228021194 0.8625587917982148 1.0149555631119616 0.8957773978083459 1.0 19.701088698974807 -6.260690498473449 24.999420402469575 0.9587309532897289 0.8585544429476313 0.19707200998464547 0.10960412323348535 142.9986546070899 4773695.552930051 0.04038016407783981 0.03814778810214411 5.486678357356164e-07 6.260690498473449 -0.10017651034209762 TGRDT(ph)PENGETAIGAENSEK ddPTM_KYSE-520_SHP099_60min_R1 1 TGRDTPENGETAIGAENSEK 20 1 Q8N3X1-2;Q8N3X1 Q8N3X1-2 FNBP4 Formin-binding protein 4 1 T(0.004)GRDT(0.996)PENGETAIGAENSEK 92.56299999999999 0.0043133 482550000.0 782210.0 722730.0 596430.0 585880.0 658450.0 736620.0 602410.0 792300.0 798440.0 746320.0 True False 738819.2520030243 688008.9659601533 634876.8321217416 641561.8590487549 710266.268931981 732022.4813446857 663307.4817550344 789551.6962242108 653463.4230344555 739708.185428174 0.9987982647175452 0.9301086286640251 0.8582801226597869 0.8673175066697311 0.9601979306486235 0.9896098160938431 0.8967150760554101 1.0673826676220777 0.88340704605858 1.0 19.496596714817905 -5.913313645679104 9.313882420904358 0.968058863834471 0.9109430978514019 0.1545788337657128 0.06030702706268911 0.5568730824003439 54.61409863776348 0.018437877970040133 0.020922605057943227 1.2209176000506366e-06 5.913313645679104 -0.05711576598306911 TGS(ph)CSELDACPSK ddPTM_KYSE-520_SHP099_60min_R1 2 TGSCSELDACPSK 13 0 Q9H1H9-3;Q9H1H9-4;Q9H1H9-2;A0A1B0GUA8;Q9H1H9;H0Y9Z7 Q9H1H9-3 KIF13A Kinesin-like protein KIF13A 1 T(0.017)GS(0.981)CS(0.001)ELDACPSK;T(0.008)GS(0.969)CS(0.023)ELDACPSK 180.48 1.6241e-07 863110000.0 1792400.0 1549090.0 1223030.0 1109200.0 1224810.0 1552930.0 1198680.0 1483420.0 1748320.0 1489280.0 True False 1692971.998939184 1474669.3911685061 1301868.4707171875 1214618.0345068583 1321195.5787843873 1543237.587839865 1319854.2723894413 1478274.3622528291 1430869.1595606431 1476086.137842307 1.1469330654469212 0.9990402005428546 0.8819732381066967 0.8228639260052574 0.8950667206425137 1.0454929074096702 0.8941580295027767 1.0014824503492192 0.9693669785777133 1.0 20.493345482464974 -9.380107014229049 14.34925241119879 1.0000044749538897 0.9561532359502899 0.01273726522426677 0.08904540014177381 0.0 0.0 0.09051629932848954 0.02195342723361102 4.167666756033983e-10 9.380107014229049 -0.04385123900359977 TGS(ph)EPALSPAVVR ddPTM_KYSE-520_SHP099_60min_R1 8 TGSEPALSPAVVR 13 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 T(0.024)GS(0.976)EPALSPAVVR;TGS(1)EPALSPAVVR;TGS(1)EPALSPAVVR;TGS(1)EPALSPAVVR;TGS(1)EPALSPAVVR;TGS(1)EPALSPAVVR;TGS(1)EPALSPAVVR;T(0.004)GS(0.996)EPALSPAVVR 281.01 8.3567e-24 6645170000.0 5317470.0 5659580.0 4721740.0 3588820.0 4250970.0 5263390.0 3842240.0 4375470.0 5314700.0 4519710.0 True False 5022499.33898635 5387685.281597221 5026110.915451113 3929900.3737819255 4585497.154289289 5230539.230654612 4230651.115848779 4360292.51581238 4349684.452684264 4479668.885681169 1.1211764679841152 1.202697212469975 1.1219826830319075 0.8772747437524845 1.0236241274319158 1.1676173762247313 0.9444115678664663 0.9733515192941238 0.970983473039182 1.0 22.09496066887496 -5.03802601128628 12.789174132289567 0.9992152939520166 1.162049162260706 0.497672178934232 0.07184528829669283 1.575756782855474 529.8756918447493 0.02022683285171422 0.0352579263028003 9.161656163882046e-06 5.03802601128628 0.1628338683086895 TGS(ph)ESS(ph)QTGTSTTSSR ddPTM_KYSE-520_SHP099_60min_R1 5 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 2 T(0.143)GS(0.857)ES(0.046)S(0.945)QT(0.009)GTSTTSSR;T(0.005)GS(0.995)ES(0.001)S(0.971)QT(0.028)GTSTTSSR;TGS(0.999)ES(0.001)S(0.955)QT(0.045)GTSTTSSR;T(0.023)GS(0.977)ES(0.002)S(0.998)QTGTSTTSSR;T(0.119)GS(0.881)ESS(0.998)QT(0.001)GTSTTSSR 279.5 5.078e-37 15076000000.0 3308530.0 2990210.0 2940960.0 3086410.0 2986110.0 2999170.0 3147300.0 3603060.0 3815300.0 3301220.0 True False 3124999.245508958 2846555.8232032824 3130538.9873023713 3379741.478436994 3221099.8683582335 2980451.0675443755 3465459.798687968 3590561.825820528 3122537.6958861775 3271973.7591102947 0.9550807786302964 0.8699812506984498 0.9567738673288193 1.032936608683562 0.9844516201847857 0.9109031083289649 1.0591343494240875 1.0973687719295349 0.954328465254944 1.0 21.64172974738585 -5.014021558603472 5.526743041237487 1.0064930509476748 0.9119917622327649 0.33761932815861095 0.05269050435237052 0.18382945424917507 19.01675443942543 0.014808043473380073 0.028531737057044284 9.682297916389324e-06 5.014021558603472 -0.09450128871490993 TGS(ph)ESSQTGTSTTSSR ddPTM_KYSE-520_SHP099_60min_R1 9 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 T(0.016)GS(0.948)ES(0.036)SQTGTSTTSSR;T(0.008)GS(0.992)ESSQTGTSTTSSR;T(0.008)GS(0.989)ES(0.003)SQTGTSTTSSR;T(0.019)GS(0.98)ESSQTGTSTTSSR;T(0.003)GS(0.981)ES(0.015)S(0.001)QTGTSTTSSR;T(0.047)GS(0.904)ES(0.041)S(0.008)QTGTSTTSSR;T(0.03)GS(0.97)ESSQTGTSTTSSR;TGS(0.988)ES(0.011)SQTGTSTTSSR;T(0.002)GS(0.933)ES(0.065)SQTGTSTTSSR 221.85 4.4029999999999996e-18 4079409000.0 880197.0 980539.0 718482.0 713994.0 797958.0 999466.0 826219.0 993522.0 1140620.0 1049784.0 True False 831370.7177807826 933432.4346209543 764796.4993318454 781851.7750898768 860752.7548400427 993227.9619609114 909741.279640383 990075.704071779 933512.1606902968 1040483.7304795946 0.799023274873866 0.8971139166113663 0.7350393638344778 0.7514310432605175 0.8272620989886044 0.9545828856959624 0.8743445505111859 0.9515532776427165 0.8971905406536334 1.0 19.98882297587756 -6.148488070754264 4.5825094989031365 0.9283988245880404 0.7977326160609329 0.629901974012057 0.05137653102827872 0.16494957216132672 5.536914313479841 0.017541549116967634 0.017573738265999343 7.104146834789394e-07 6.148488070754264 -0.13066620852710742 TGS(ph)NAAQYK ddPTM_KYSE-520_SHP099_60min_R1 10 TGSNAAQYK 9 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 T(0.011)GS(0.989)NAAQYK;T(0.199)GS(0.801)NAAQYK;T(0.001)GS(0.999)NAAQYK;TGS(1)NAAQYK;T(0.046)GS(0.954)NAAQYK;TGS(1)NAAQYK;TGS(1)NAAQYK;T(0.007)GS(0.993)NAAQYK;T(0.022)GS(0.976)NAAQY(0.001)K;TGS(1)NAAQYK 190.88 4.7499e-06 47598200000.0 24689410.0 24433610.0 24091880.0 25324060.0 24566340.0 22066640.0 23358960.0 24563740.0 27660450.0 24625660.0 True False 23319839.210181378 23259782.700003657 25644881.133170914 27730851.048443764 26499571.19464571 21928913.914555512 25720311.638280515 24478534.11916 22638009.54320102 24407495.810873553 0.9554375996161136 0.9529770231340738 1.0506969388373757 1.1361612540394108 1.0857144624742754 0.8984499714545139 1.0537874035738686 1.0029105119524306 0.9275023426662139 1.0 24.54082094759107 -7.547951381168353 13.450618686136458 0.9642098367687206 1.02072762736995 0.09358342256971441 0.06780299122330603 3.7862624499523294 2017.300437461191 0.04881850567956388 0.01850927148259887 2.8317089850363732e-08 7.547951381168353 0.0565177906012293 TGS(ph)NIS(ph)GASSDISLDEQYK ddPTM_KYSE-520_SHP099_60min_R1 3 TGSNISGASSDISLDEQYK 19 0 P22059 P22059 OSBP Oxysterol-binding protein 1 2 T(0.344)GS(0.656)NIS(0.998)GAS(0.002)SDISLDEQYK;T(0.378)GS(0.622)NIS(0.953)GAS(0.038)S(0.009)DISLDEQYK;T(0.315)GS(0.685)NIS(0.723)GAS(0.272)S(0.005)DISLDEQYK 250.86 1.5976e-26 500280000.0 1709820.0 1484190.0 1382790.0 1383730.0 1431560.0 1338980.0 1333340.0 1331970.0 1505700.0 1349380.0 True False 1614972.8761583343 1412887.284585391 1471926.8559422253 1515239.2831664036 1544215.6275378042 1330622.929150587 1468127.0193443964 1327349.7069541353 1232302.8356081601 1337425.5430017528 1.2075235773751165 1.056423134714677 1.100567327762108 1.1329522537498133 1.1546180163958333 0.9949136504183269 1.0977261702728467 0.992466245242331 0.921399207646616 1.0 20.35102714552418 -6.925987778252676 0.9881085344295797 0.960834441056405 1.1232527944281872 0.580794865238087 0.054318627050458375 0.4107379303291877 0.7581592003412451 0.04271159826412702 0.021304754660869004 1.185802118082154e-07 6.925987778252676 0.16241835337178212 TGS(ph)NISGASSDISLDEQYK ddPTM_KYSE-520_SHP099_60min_R1 1 TGSNISGASSDISLDEQYK 19 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 T(0.159)GS(0.811)NIS(0.03)GASSDISLDEQYK 341.54 3.3248e-54 0.0 453170.0 384510.0 310260.0 277870.0 285090.0 331610.0 277520.0 344250.0 373100.0 350710.0 True False 428031.7567280015 366037.56243872305 330259.85603355226 304278.681255338 307524.96105978976 329540.29898551584 305574.4299341925 343055.8770985542 305354.44508561137 347602.9822482513 1.2313811405171131 1.0530334350736557 0.9501065091486673 0.8753626890290258 0.8847017337732775 0.9480364548488383 0.8790903575043472 0.9869186819966647 0.8784574951302723 1.0 18.40708093419645 -4.391562482076643 1.7952943319338783 0.9185515031530588 1.2876395661933708 0.829956686145896 0.04327631797752796 0.23544073970830168 0.9518211156370759 0.011411655906423318 0.13514910784831427 4.0591725961318625e-05 4.391562482076643 0.36908806304031205 TGS(ph)NISGASSDISLDEQYKHQLEETK ddPTM_KYSE-520_SHP099_60min_R1 1 TGSNISGASSDISLDEQYKHQLEETK 26 1 P22059 P22059 OSBP Oxysterol-binding protein 1 1 T(0.232)GS(0.679)NIS(0.043)GAS(0.035)S(0.011)DISLDEQYKHQLEETK 52.63 0.047661 336790000.0 150400.0 140150.0 144690.0 120810.0 130410.0 113390.0 94333.0 112660.0 172450.0 136450.0 True False 142057.01218503318 133416.9836305613 154016.94891218524 132291.74607714894 140672.52506859988 112682.29095011506 103869.10024135988 112269.20875504175 141137.42711073085 135241.15915649373 1.050397771440664 0.9865116837410304 1.138831919755769 0.9781914537132007 1.0401605986371447 0.8331952465722748 0.7680287635006751 0.8301408347523103 1.043598176701623 1.0 17.04517476122113 -6.251993537352037 23.95287492117435 0.8764411669197051 1.0381008689729339 0.3982760355908518 0.08690697259916932 359.1387108851057 910708.1677553125 0.029062551145022507 0.02866607946260694 5.597659311962453e-07 6.251993537352037 0.16165970205322877 TGS(ph)PGDAPERPPLCDFSEGLSAPMDFYR ddPTM_KYSE-520_SHP099_60min_R1 6 TGSPGDAPERPPLCDFSEGLSAPMDFYR 28 1 A0A2R8Y575;Q5VVD7;Q8IWE5 A0A2R8Y575 PLEKHM2 Pleckstrin homology domain-containing family M member 2 1 T(0.163)GS(0.836)PGDAPERPPLCDFSEGLS(0.001)APMDFYR;T(0.159)GS(0.841)PGDAPERPPLCDFSEGLSAPMDFYR;T(0.182)GS(0.818)PGDAPERPPLCDFSEGLSAPMDFYR;T(0.018)GS(0.982)PGDAPERPPLCDFSEGLSAPMDFYR;T(0.01)GS(0.99)PGDAPERPPLCDFSEGLSAPMDFYR;T(0.036)GS(0.964)PGDAPERPPLCDFSEGLSAPMDFYR 255.56 3.1413e-32 5036761000.0 580623.0 546947.0 495521.0 490349.0 494841.0 514384.0 442644.0 477593.0 648866.0 477045.0 True False 548414.684746745 520670.845135815 527463.0765216327 536951.6215311979 533782.171439851 511173.5386549433 487390.7753091342 475936.3413540444 531048.2909807562 472818.7524353936 1.159883532372547 1.1012059958577043 1.1155713977179993 1.1356394363917863 1.1289361276185583 1.0811194268881934 1.0308194689797794 1.0065936236720576 1.123154037874839 1.0 18.850927729726042 -6.486247631397472 3.0632679922438233 1.0410542529576092 1.1263184696938744 0.5937235829061499 0.034307188734724374 0.18635857039796339 3.523088666995806 0.013149258190045674 0.010703927425065278 3.2640166736405304e-07 6.486247631397472 0.08526421673626516 TGS(ph)PGPELLFHEGQQK ddPTM_KYSE-520_SHP099_60min_R1 12 TGSPGPELLFHEGQQK 16 0 A6NL54;A6NHN7;A6NHB5;Q14202-3;Q14202-2;Q14202 A6NL54 ZMYM3 Zinc finger MYM-type protein 3 1 T(0.091)GS(0.909)PGPELLFHEGQQK;T(0.341)GS(0.659)PGPELLFHEGQQK;T(0.024)GS(0.976)PGPELLFHEGQQK;T(0.002)GS(0.998)PGPELLFHEGQQK;T(0.055)GS(0.945)PGPELLFHEGQQK;T(0.09)GS(0.91)PGPELLFHEGQQK;T(0.016)GS(0.984)PGPELLFHEGQQK;T(0.003)GS(0.997)PGPELLFHEGQQK;T(0.003)GS(0.997)PGPELLFHEGQQK;T(0.089)GS(0.911)PGPELLFHEGQQK;T(0.086)GS(0.914)PGPELLFHEGQQK;T(0.027)GS(0.973)PGPELLFHEGQQK 334.03 1.1291999999999998e-58 14471000000.0 13766740.0 11925050.0 10930570.0 10384430.0 11413750.0 11981180.0 11375740.0 11349750.0 14741940.0 12172780.0 True False 13003071.488884179 11352152.698135024 11635172.031730352 11371363.105007267 12311947.18964598 11906401.011426946 12525710.815723516 11310380.366301563 12065175.310065342 12064938.639479535 1.0777569515633372 0.9409208813535036 0.9643788816013636 0.9425131320433978 1.0204732537435517 0.9868596407499485 1.0381910086750228 0.937458590074477 1.0000196163936577 1.0 23.524317242447033 -5.7824378097642954 24.98545672608712 0.995575763477054 0.9772863412627734 0.026750421262415558 0.04326825052997127 956.0618838625834 1137585.2067185906 0.013225855191858229 0.015011950873842161 1.6502973041851392e-06 5.7824378097642954 -0.01828942221428065 TGS(ph)QGQCTQVR ddPTM_KYSE-520_SHP099_60min_R1 5 TGSQGQCTQVR 11 0 P62857 P62857 RPS28 40S ribosomal protein S28 1 T(0.04)GS(0.96)QGQCTQVR;TGS(1)QGQCTQVR;TGS(1)QGQCTQVR;T(0.008)GS(0.992)QGQCTQVR;TGS(1)QGQCTQVR 170.26 5.8417e-05 694010000.0 1293630.0 1039300.0 983565.0 749423.0 916595.0 1028559.0 976800.0 921577.0 1163280.0 1081445.0 True False 1221869.7651125297 989370.4679788953 1046967.1736596419 820647.936597758 988725.8117878486 1022139.3817564101 1075544.47664932 918380.2644846895 952057.6759024119 1071864.238651479 1.1399482518884798 0.9230371089006854 0.9767721842990487 0.7656267529087656 0.9224356743460091 0.9536089972013359 1.0034334926617863 0.8568065165044699 0.8882259912880417 1.0 20.031690756250832 -4.177759922787671 2.7470951283151783 0.9149513273909885 1.2143278364676513 0.4741991539992889 0.06865911180256398 0.6113413800103459 4.999038185193974 0.017890990029283203 0.4523597038431297 6.64110087817249e-05 4.177759922787671 0.2993765090766628 TGS(ph)S(ph)SPPGGPPKPGSQLDSMLGSLQSDLNK ddPTM_KYSE-520_SHP099_60min_R1 1 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 2 T(0.449)GS(0.55)S(0.526)S(0.475)PPGGPPKPGSQLDSMLGSLQSDLNK 74.605 0.011644 79110000.0 167010.0 151690.0 144410.0 151870.0 160920.0 141020.0 139350.0 157320.0 187100.0 164200.0 True False 157745.62237381915 144402.58470866815 153718.89966416938 166303.67913861966 173583.48849044644 140139.84187128695 153436.85792494158 156774.2936387642 153127.35640717734 162745.31574566686 0.969279033630307 0.8872918034355954 0.9445365536934798 1.0218646132864044 1.066595912116556 0.8610990812804282 0.9428035284574812 0.9633106361338598 0.9409017746875115 1.0 17.312256493724792 -5.02420452212945 0.0035482994495976946 1.9057483090386365 6.793765132935363e-08 0.023572222826932387 0.056638728797476945 255369.19044361135 184.3029099756758 48524.06776248337 50471.925888091704 9.457916551810337e-06 5.02420452212945 -1.9057482411009852 TGS(ph)TSSKEDDYESDAATIVQK ddPTM_KYSE-520_SHP099_60min_R1 9 TGSTSSKEDDYESDAATIVQK 21 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.088)GS(0.27)T(0.214)S(0.214)S(0.214)KEDDYESDAATIVQK;T(0.12)GS(0.805)T(0.022)S(0.026)S(0.026)KEDDYESDAATIVQK;T(0.086)GS(0.521)T(0.327)S(0.055)S(0.012)KEDDYESDAATIVQK;T(0.1)GS(0.738)T(0.135)S(0.025)S(0.003)KEDDYESDAATIVQK;T(0.127)GS(0.868)T(0.003)SS(0.001)KEDDYESDAATIVQK;T(0.002)GS(0.861)T(0.118)S(0.016)S(0.002)KEDDYESDAATIVQK;T(0.029)GS(0.817)T(0.132)S(0.022)S(0.001)KEDDYESDAATIVQK;T(0.135)GS(0.841)T(0.018)S(0.002)S(0.004)KEDDYESDAATIVQK;T(0.106)GS(0.852)T(0.012)S(0.014)S(0.016)KEDDYESDAATIVQK 345.8 1.3777999999999997e-65 16999380000.0 6987755.0 7398182.0 5727665.0 5422083.0 6193140.0 8367230.0 7500233.0 9197160.0 11065350.0 9473940.0 True False 6600130.300405759 7042762.23182242 6096879.450488027 5937396.138111301 6680504.883853609 8315007.013903632 8258429.746860114 9165257.198593276 9056161.3747737 9390008.262213795 0.7028886574003619 0.7500272667664313 0.649294364843362 0.6323100014729376 0.7114482434202468 0.8855164747153567 0.8794912119612024 0.976064870515084 0.9644465821416235 1.0 23.16269499662278 -6.444807229656016 1.6312084077803395 0.9647337010061088 0.6816402609083858 0.9112906132713307 0.03995737259555725 0.11284040626802198 0.6015482607307368 0.020361791718935415 0.016105174879456462 3.590812847301152e-07 6.444807229656016 -0.28309344009772297 TGS(ph)YGALAEITASK ddPTM_KYSE-520_SHP099_60min_R1 8 TGSYGALAEITASK 14 0 O14974-5;O14974-4;O14974-3;O14974-2;O14974;F8VZN8;H0YHI8;H0YIS4;A0A3B3ISH4 O14974-5 PPP1R12A Protein phosphatase 1 regulatory subunit 12A 1 T(0.028)GS(0.972)YGALAEITASK;T(0.003)GS(0.997)YGALAEITASK;TGS(1)YGALAEITASK;T(0.009)GS(0.991)YGALAEITASK;T(0.137)GS(0.863)YGALAEITASK;T(0.006)GS(0.994)YGALAEITASK;TGS(1)YGALAEITASK;T(0.046)GS(0.954)YGALAEITASK 233.19 2.8589999999999996e-18 19983060000.0 6379980.0 6421610.0 5174547.0 4674572.0 4604175.0 5724604.0 5058204.0 6386180.0 6773010.0 6330216.0 True False 6026069.791225186 6113106.216566876 5508106.579187928 5118841.917418683 4966497.378327743 5688874.623001968 5569536.6236338 6364027.832125619 5543202.117687743 6274135.211073525 0.960462213276737 0.974334471749598 0.8779068977452708 0.815864138277446 0.7915827777447529 0.9067185248034497 0.887697895608602 1.0143274918419733 0.8835005831408091 1.0 22.58098518971438 -10.600003861268686 7.867283764093555 1.0000711861198774 0.9001652111867313 0.17213076319348597 0.06483685060671908 8.923680134871897e-05 4.5370334907031035e-06 0.06919966760205479 0.016771453551481266 2.5118640986784995e-11 10.600003861268686 -0.09990597493314612 TGSDHTNPTS(ph)PLLVKPSDLLEENK ddPTM_KYSE-520_SHP099_60min_R1 1 TGSDHTNPTSPLLVKPSDLLEENK 24 1 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;Q96D71;Q96D71-3;H0YE73 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 TGSDHTNPT(0.042)S(0.958)PLLVKPSDLLEENK 112.99 0.00018485 424090000.0 294060.0 332610.0 327690.0 599170.0 319440.0 396800.0 377390.0 456840.0 435170.0 444750.0 True False 277747.9056059229 316630.91634221125 348813.42172253836 656114.9366529704 344578.11063502426 394323.42401451356 415540.2641714649 455255.3286672573 356154.0977429792 440809.8610102641 0.630085508907106 0.7182936325801447 0.7913013128225287 1.4884307151143632 0.7816932902664827 0.8945431100628938 0.9426746108154536 1.0327702915354173 0.8079540165610911 1.0 18.74979697210151 -5.01263513639399 24.896564042509148 0.9913696639768582 0.6943414146676316 0.334298576774232 0.1851790443186189 652.5732871798639 1285852.8902929325 0.04954926645510656 0.09174650428956922 9.713256638966187e-06 5.01263513639399 -0.29702824930922667 TGSEPALS(ph)PAVVR ddPTM_KYSE-520_SHP099_60min_R1 8 TGSEPALSPAVVR 13 0 O75815;O75815-3;O75815-2 O75815 BCAR3 Breast cancer anti-estrogen resistance protein 3 1 TGSEPALS(1)PAVVR;TGSEPALS(1)PAVVR;TGSEPALS(1)PAVVR;TGSEPALS(1)PAVVR;TGSEPALS(1)PAVVR;TGSEPALS(1)PAVVR;TGSEPALS(1)PAVVR;TGSEPALS(1)PAVVR 250.21 2.9601e-16 10981460000.0 8238120.0 9681190.0 7549850.0 6838440.0 6420630.0 9471000.0 6948480.0 8745080.0 10066190.0 9012120.0 True False 7781135.061314919 9216091.100637559 8036525.411187109 7488363.281548034 6925897.052612558 9411887.975910923 7650900.169029763 8714745.358597018 8238423.64399981 8932279.628123263 0.8711253325316901 1.0317736887256324 0.899717176999713 0.8383485060152998 0.7753784409980164 1.0536938349173053 0.8565450800421563 0.9756462763613738 0.9223203915449704 1.0 23.090596985262 -6.269451643208771 24.999686229842847 0.9535504966340804 0.8899371549280137 0.1994928886261811 0.07707922571291083 1352.5548084982665 4220201.08539228 0.027916406133708497 0.025046051002352358 5.377103014796158e-07 6.269451643208771 -0.0636133417060667 TGSES(ph)SQTGTSTTSSR ddPTM_KYSE-520_SHP099_60min_R1 5 TGSESSQTGTSTTSSR 16 0 E7EX17;P23588-2;P23588 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 1 TGS(0.016)ES(0.625)S(0.336)QT(0.023)GTSTTSSR;TGS(0.03)ES(0.968)S(0.002)QTGTSTTSSR;TGS(0.379)ES(0.597)S(0.021)QT(0.002)GTSTTSSR;T(0.003)GS(0.03)ES(0.953)S(0.014)QTGTSTTSSR;T(0.003)GS(0.373)ES(0.624)SQTGTSTTSSR 361.36 1.0945999999999999e-71 21879090000.0 1479010.0 1618260.0 1275390.0 1120720.0 1193220.0 1533720.0 1335450.0 1624380.0 1860820.0 1494320.0 True False 1396966.3669666608 1540516.3605422182 1357603.6800961497 1227232.891843245 1287119.6255068986 1524147.4845754532 1470450.3187360112 1618745.4049131435 1522941.9954548553 1481081.4873633662 0.9432069598368636 1.0401293741674258 0.9166299705176704 0.8286059223034212 0.8690403846706908 1.0290773989004167 0.9928220231512848 1.0929482400018704 1.028263473987518 1.0 20.498219587520765 -6.281939148670896 23.01926239508593 1.0321940223249157 0.9210112920472292 0.4793175282661969 0.05678339315770952 295.33600780390447 331631.8981257575 0.02244564841731549 0.019827199330521378 5.224693898590817e-07 6.281939148670896 -0.11118273027768655 TGSGS(ph)PFAGNS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 3 TGSGSPFAGNSPAR 14 0 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 TGS(0.015)GS(0.985)PFAGNS(1)PAR;TGSGS(1)PFAGNS(1)PAR;TGSGS(1)PFAGNS(1)PAR 204.9 5.9689e-11 1404010000.0 2441280.0 2040810.0 1934730.0 1974470.0 2049020.0 1900670.0 1957320.0 2082640.0 2399370.0 1860000.0 True False 2305857.331828976 1942766.4242817403 2059445.7914774495 2162123.0351539454 2210266.2166709797 1888807.2135122633 2155185.007202344 2075415.8079318295 1963704.891195559 1843521.847058104 1.2507892626868882 1.053834228968868 1.1171257854979681 1.1728220300748082 1.1989368176993005 1.024564594407398 1.1690585661578097 1.1257885613038883 1.0651920910670212 1.0 20.814033082829745 -7.963402228650039 2.3227489438936018 1.000561266090057 1.1366363388629073 0.341614874856766 0.06254558540913302 0.3242431330947271 3.964853696781576 0.05782552272744363 0.01593876438528611 1.0879220305269614e-08 7.963402228650039 0.13607507277285036 TGSGS(ph)PFAGNS(ph)PAREGEQDAASLKDVFK ddPTM_KYSE-520_SHP099_60min_R1 4 TGSGSPFAGNSPAREGEQDAASLKDVFK 28 2 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 2 T(0.281)GS(0.335)GS(0.399)PFAGNS(0.984)PAREGEQDAASLKDVFK;T(0.011)GS(0.104)GS(0.884)PFAGNS(1)PAREGEQDAASLKDVFK;T(0.293)GS(0.332)GS(0.377)PFAGNS(0.999)PAREGEQDAASLKDVFK;T(0.013)GS(0.115)GS(0.872)PFAGNS(1)PAREGEQDAASLKDVFK 193.58 1.1564e-15 1037071000.0 1738439.0 1950894.0 2030818.0 1166970.0 1379599.0 1185479.0 849085.0 889997.0 2441820.0 1101811.0 True False 1642004.323177771 1857170.1238884076 2161727.7777036848 1277878.4779376774 1488165.5924554502 1178079.985829894 934918.7980710375 886909.8081338604 1998447.041272976 1092049.8117359865 1.5035983757623148 1.7006276672820821 1.9795138962272016 1.1701650091457703 1.3627268431004762 1.0787786172108293 0.8561136937378668 0.8121514225838988 1.829996232585881 1.0 20.05860723282142 -5.283107615459641 21.131661195762177 1.1433147793848457 1.7251844274525006 0.4436380464106089 0.291828479261324 97.44275173427306 95029.44955045945 0.08289184966184185 0.12320885956388815 5.2106557831130714e-06 5.283107615459641 0.5818696480676548 TGSGS(ph)PFAGNSPAR ddPTM_KYSE-520_SHP099_60min_R1 5 TGSGSPFAGNSPAR 14 0 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 T(0.003)GS(0.087)GS(0.911)PFAGNSPAR;T(0.091)GS(0.031)GS(0.877)PFAGNSPAR;T(0.009)GS(0.014)GS(0.978)PFAGNSPAR;TGSGS(1)PFAGNSPAR;TGSGS(1)PFAGNSPAR 198.89 4.7607e-11 1159740000.0 2172250.0 1928390.0 1756710.0 1536110.0 1640890.0 1781480.0 1595200.0 1699110.0 2246660.0 1980700.0 True False 2051750.962226982 1835747.2498276003 1869950.3374353794 1682101.4325516883 1770018.7076130272 1770361.122513549 1756458.3836517169 1693216.1839852561 1838723.1776897337 1963152.5389612804 1.0451306872529527 0.9351016863920869 0.9525242182274766 0.8568368474523643 0.9016205681854749 0.901794989120031 0.8947131457146336 0.862498532529291 0.9366175787148037 1.0 20.90474084536465 -3.8656368527894287 1.1976338910510682 0.9027642678937708 1.2489963347808632 0.4836694623462098 0.04031013336505482 2.640496395351786 1.7033347899241966 0.011250360821457943 1.4261201464590616 0.00013625835677663294 3.8656368527894287 0.3462320668870924 TGSGSPFAGNS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 8 TGSGSPFAGNSPAR 14 0 Q9UPT8;M0QY97 Q9UPT8 ZC3H4 Zinc finger CCCH domain-containing protein 4 1 TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR;TGSGSPFAGNS(1)PAR 340.12 4.9345e-54 10227160000.0 7857450.0 7611100.0 6760690.0 6262450.0 6784950.0 8505740.0 6973650.0 7963440.0 9161400.0 8292760.0 True False 7421581.585061761 7245451.331505983 7196494.8948864555 6857631.365125752 7318886.963915317 8452652.521615943 7678614.598265289 7935816.6853208635 7497920.700100017 8219292.598069644 0.9029465123074909 0.8815176300217887 0.8755613465539116 0.834333524850583 0.8904521741486862 1.0283917284561819 0.9342184265430171 0.96551091114394 0.9122343085657948 1.0 22.970582801531183 -6.074767139733962 8.424671773167777 0.9635872164358602 0.8728208671802324 0.644718380285106 0.033916250197207426 0.22759922008318648 23.853845586089065 0.010977471961676748 0.011000759986498822 8.418464023458058e-07 6.074767139733962 -0.09076634925562777 TGSNIS(ph)GASSDISLDEQYK ddPTM_KYSE-520_SHP099_60min_R1 2 TGSNISGASSDISLDEQYK 19 0 P22059 P22059 OSBP Oxysterol-binding protein 1 1 TGSNIS(1)GASSDISLDEQYK;T(0.034)GS(0.188)NIS(0.778)GASSDISLDEQYK 371.37 3.5459999999999996e-78 1717780000.0 1549490.0 1518170.0 1116160.0 1102400.0 1038610.0 1375450.0 1258800.0 1397130.0 1437880.0 1415810.0 True False 1463536.7008682638 1445234.8343803715 1188109.4595191444 1207171.7645513532 1120342.698117466 1366865.3063527297 1386051.7887040991 1392283.6821225933 1176797.2380050875 1403267.0248835133 1.042949541973135 1.0299072156280036 0.846673825046071 0.8602580571944686 0.7983816894795677 0.9740593073981729 0.9877320311286847 0.9921730201264924 0.838612478692553 1.0 20.420358131966996 -9.320973914103032 17.342607803356223 0.999999999231755 0.9294537244478797 0.05959806522217137 0.08328535044596522 0.0 0.0 0.0866274018255506 0.021010231047033492 4.775579573137507e-10 9.320973914103032 -0.07054627478387532 TGSPGS(ph)EVVTLQQFLEESNK ddPTM_KYSE-520_SHP099_60min_R1 1 TGSPGSEVVTLQQFLEESNK 20 0 Q3V6T2;H0Y470;A0A2U3TZV9;A0A2R8Y7B1;H7C2C6;A0A2R8Y885;A0A2R8Y820;A0A2R8YCU9;A0A2R8YDS8;A0A2R8Y7D4;Q3V6T2-5;Q3V6T2-4;Q3V6T2-2;Q3V6T2-3;A0A2R8Y5D7;H0Y7U8;H0Y7K3;A0A2R8Y4Z5;A0A2R8Y4C6 Q3V6T2 CCDC88A Girdin 1 T(0.235)GS(0.235)PGS(0.53)EVVTLQQFLEESNK 263.09 1.8638e-35 73210000.0 113400.0 131060.0 95746.0 96932.0 104040.0 144360.0 110750.0 153050.0 150520.0 145410.0 True False 107109.47594270446 124763.68087492921 101917.94035901641 106144.38813633157 112227.35609337567 143458.99569237698 121945.69081583987 152519.10527213864 123189.36230041865 144121.7805272682 0.7431872930714944 0.8656823446010898 0.7071654262537597 0.736490957494442 0.778698096032348 0.9954012167177895 0.8461295049901736 1.0582654801664877 0.8547588147310665 1.0 17.136928854947183 -6.246131827344543 19.26974032841496 0.9480036826682745 0.7668335085133648 0.6249691989584532 0.07150714481830475 26.164254171784837 32935.860335315425 0.02243286952537493 0.022259889485880598 5.673723569751528e-07 6.246131827344543 -0.18117017415490966 TGSPGS(ph)PGAGGVQSTAK ddPTM_KYSE-520_SHP099_60min_R1 5 TGSPGSPGAGGVQSTAK 17 0 O43237;O43237-2;J3KRZ2;J3KRI4 O43237 DYNC1LI2 Cytoplasmic dynein 1 light intermediate chain 2 1 TGSPGS(1)PGAGGVQSTAK;TGSPGS(1)PGAGGVQSTAK;TGSPGS(1)PGAGGVQSTAK;TGSPGS(1)PGAGGVQSTAK;TGSPGS(1)PGAGGVQSTAK 364.41 5.871499999999999e-72 2603900000.0 3770020.0 4158200.0 2648930.0 2757780.0 2877500.0 4439840.0 3181910.0 4192030.0 4442270.0 4401950.0 True False 3560889.4752514563 3958433.8304145494 2819684.266237852 3019878.5820432063 3103942.8792645964 4412129.311684977 3503568.515249017 4177488.8263571598 3635665.748513694 4362952.147665274 0.8161651456931468 0.9072833477059351 0.6462789805629054 0.6921640393556046 0.7114317953098785 1.0112715341253558 0.803027032309732 0.9574913235279555 0.8333040623558593 1.0 22.056873219819565 -6.247953965440555 24.947448382412464 0.9109875162506951 0.7536497896321093 0.45447157278715866 0.09079410543034618 789.8180166199658 1461130.9213354941 0.030808601921193998 0.03064395740245221 5.64996860452608e-07 6.247953965440555 -0.1573377266185858 TGSQGQCTQVR ddPTM_KYSE-520_SHP099_60min_R1 2 TGSQGQCTQVR 11 0 P62857 P62857 RPS28 40S ribosomal protein S28 0 ; 150.04 0.00035878 130300000.0 33473.0 43810.0 27972.0 21416.3 30679.0 35513.0 27982.0 34876.0 39811.0 32228.0 False True 31616.18596322882 41705.30183984935 29775.119876782435 23451.698712954614 33093.262760367914 35291.3501941215 30810.693638002962 34755.02329611958 32582.325953640477 31942.48499300458 0.9897847950825611 1.3056373619329502 0.9321478865311575 0.7341851680634913 1.036026557345659 1.1048404719247837 0.9645678363706055 1.0880500782494207 1.0200310326756363 1.0 14.963188932362097 -4.788180927989371 24.999642310670335 0.9845434545858094 1.1477114263511858 0.22607504571525927 0.12043209269438782 287.7567241069614 269012.2867843675 0.032672872616373055 0.06804357786140289 1.6286174058737695e-05 4.788180927989371 0.16316797176537645 TGSS(ph)LLKEEEEDGQEGS(ph)IHNLPLVTSQRPFYDGPMPTPR ddPTM_KYSE-520_SHP099_60min_R1 1 TGSSLLKEEEEDGQEGSIHNLPLVTSQRPFYDGPMPTPR 39 2 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 2 T(0.284)GS(0.341)S(0.375)LLKEEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR 91.16 0.0017602999999999998 562160000.0 62452.0 74496.0 69187.0 86632.0 61451.0 66995.0 63191.0 69384.0 81431.0 64716.0 True False 58987.66306502449 70917.10033922436 73646.90472311401 94865.47923313951 66286.84409163821 66576.85935446661 69578.96296472882 69143.32309834727 66645.18310845994 64142.66658828613 0.9196322230201285 1.105615093841069 1.14817341779432 1.478976230315689 1.0334282563759776 1.0379496658878384 1.0847532019729826 1.0779614689573005 1.0390148500722112 1.0 15.96899671140398 TGSS(ph)PTQGIVNK ddPTM_KYSE-520_SHP099_60min_R1 1 TGSSPTQGIVNK 12 0 E9PFH7;A0A087WYG2;A0A669KB35;Q9UPT6 E9PFH7 MAPK8IP3 C-Jun-amino-terminal kinase-interacting protein 3 1 TGS(0.036)S(0.964)PTQGIVNK 202.25 1.3345e-08 0.0 441810.0 493910.0 366190.0 308230.0 306090.0 414030.0 347030.0 438920.0 473630.0 425550.0 True False 417301.9185736005 470181.82222597516 389795.193324716 337524.0865272711 330177.5415861343 411445.88519336947 382111.17908641876 437397.48896469834 387630.7312406808 421779.95807289035 0.9893829960063774 1.11475619745953 0.9241671773729778 0.8002373751218912 0.7828194186720325 0.9754989001214349 0.9059491134483536 1.0370276742478812 0.9190354444809632 1.0 18.686131017942504 -9.801256377886903 19.951952262791096 0.9999999999999961 0.9378552572717184 0.03616910685313457 0.09472887958300365 0.0 0.0 0.10098579794432817 0.02449265362422047 1.5803148535818525e-10 9.801256377886903 -0.062144742728277746 TGSS(ph)SPPGGPPKPGSQLDSMLGS(ph)LQSDLNK ddPTM_KYSE-520_SHP099_60min_R1 1 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 2 T(0.256)GS(0.071)S(0.336)S(0.336)PPGGPPKPGS(0.001)QLDS(0.078)MLGS(0.917)LQS(0.004)DLNK 113.51 0.00021858 136700000.0 171550.0 165170.0 157810.0 177080.0 183740.0 129190.0 148480.0 207110.0 188790.0 198450.0 True False 162033.7795235533 157234.98527477545 167982.68510492778 193909.62995895647 198199.29266240742 128383.6772894027 163489.80742515475 206391.58374983753 154510.4950086105 196691.88739176388 0.823794929583548 0.7993974096226979 0.8540397234093638 0.9858547423093978 1.007663789750724 0.652714654334943 0.8311975119722228 1.0493141658595921 0.7855458456243395 1.0 17.585577928946822 -13.999999999962432 0.19499037752525852 1.5729681966146842 0.8469120314871381 0.10981420024022337 0.11316107835345755 347.3175741557958 3.4179842751675125 77.46898560210032 0.30262990275326906 1.000000000086504e-14 13.999999999962432 -0.7260561651275461 TGSS(ph)SPPGGPPKPGSQLDSMLGSLQSDLNK ddPTM_KYSE-520_SHP099_60min_R1 2 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 T(0.113)GS(0.113)S(0.416)S(0.345)PPGGPPKPGS(0.007)QLDS(0.006)MLGSLQSDLNK;T(0.089)GS(0.089)S(0.461)S(0.361)PPGGPPKPGSQLDSMLGSLQSDLNK 207.92 2.3074e-22 1870550000.0 791130.0 966320.0 708420.0 622781.0 656780.0 819290.0 624060.0 811490.0 984220.0 960020.0 True False 747244.4418214448 919896.5367241083 754085.8867120772 681969.9189940649 708464.8494329808 814176.5072098044 687146.0750386718 808675.1305931906 805510.4581671404 951514.9696842578 0.7853207417949544 0.9667704303478888 0.7925107967164261 0.7167201155231049 0.7445651114328463 0.8556633717281121 0.7221600257815053 0.8498816690834976 0.8465557388281908 1.0 19.859866828276473 -8.261919903204749 1.4807690139345606 0.9994708481317656 0.8018465393314895 0.4171857619864333 0.06999271231407511 0.9899591383727204 3.735231880744787 0.07013026370369535 0.02048310296493879 5.471168581804078e-09 8.261919903204749 -0.19762430880027604 TGSSLLKEEEEDGQEGS(ph)IHNLPLVTSQRPFYDGPMPTPR ddPTM_KYSE-520_SHP099_60min_R1 2 TGSSLLKEEEEDGQEGSIHNLPLVTSQRPFYDGPMPTPR 39 2 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR;TGSSLLKEEEEDGQEGS(1)IHNLPLVTSQRPFYDGPMPTPR 126.58 2.0892e-05 656720000.0 372570.0 390470.0 317040.0 320800.0 316078.0 306431.0 307675.0 399719.0 463310.0 260338.0 True False 351902.7994001179 371711.23509258096 337476.9056819355 351288.735547963 340951.54036218824 304518.45046419196 338777.791618632 398332.46808411577 379184.5830946517 258031.60785989906 1.3637972584784541 1.440564736140409 1.3078897910258036 1.3614174575802314 1.321355717580582 1.180159488947313 1.3129313669299574 1.5437351702292013 1.4695276529863501 1.0 17.977188275394155 -4.7699819536482755 24.514211442077993 1.328951751296087 1.4021810023871084 0.050592271361051155 0.1417746482004629 501.8709823553912 1440214.0086450614 0.03734493430407769 0.07981234255218354 1.6983142214887426e-05 4.7699819536482755 0.07322925109102152 TGSSS(ph)PPGGPPKPGSQLDSMLGS(ph)LQSDLNK ddPTM_KYSE-520_SHP099_60min_R1 1 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 2 T(0.005)GS(0.028)S(0.149)S(0.817)PPGGPPKPGSQLDS(0.446)MLGS(0.549)LQS(0.005)DLNK 109.59 0.00025992 169490000.0 211330.0 178730.0 176400.0 208610.0 185830.0 170540.0 168330.0 230340.0 229210.0 211050.0 True False 199607.1036240895 170143.54252080043 187771.02624997942 228436.2316791163 200453.76377193411 169475.59660139921 185346.43914248596 229541.0043017603 187591.2419138917 209180.2611944156 0.9542348904449037 0.813382398268765 0.8976517438969154 1.0920544336963223 0.9582824049809798 0.810189238858851 0.8860608457230194 1.0973358718986448 0.8967922730507603 1.0 17.67438719590468 -1.0000300684467307 0.07225753954225228 1.0681079237208235 0.6297627826361583 0.05832156217641382 0.09280454872394929 739.835603634267 3.945368716254558 4.044703623171807 32.82141666019376 0.09999307672394867 1.0000300684467307 -0.43834514108466527 TGSSS(ph)PPGGPPKPGSQLDSMLGSLQSDLNK ddPTM_KYSE-520_SHP099_60min_R1 11 TGSSSPPGGPPKPGSQLDSMLGSLQSDLNK 30 1 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 T(0.028)GS(0.072)S(0.217)S(0.68)PPGGPPKPGS(0.003)QLDSMLGSLQSDLNK;T(0.016)GS(0.056)S(0.197)S(0.715)PPGGPPKPGS(0.013)QLDS(0.003)MLGSLQSDLNK;T(0.026)GS(0.026)S(0.133)S(0.816)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.026)GS(0.026)S(0.081)S(0.868)PPGGPPKPGSQLDSMLGSLQSDLNK;TGS(0.012)S(0.104)S(0.883)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.012)GS(0.047)S(0.184)S(0.756)PPGGPPKPGS(0.001)QLDS(0.001)MLGS(0.001)LQSDLNK;T(0.004)GS(0.053)S(0.196)S(0.747)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.113)GS(0.113)S(0.344)S(0.431)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.037)GS(0.092)S(0.237)S(0.628)PPGGPPKPGS(0.001)QLDS(0.003)MLGS(0.001)LQSDLNK;T(0.007)GS(0.038)S(0.249)S(0.706)PPGGPPKPGSQLDSMLGSLQSDLNK;T(0.007)GS(0.028)S(0.148)S(0.817)PPGGPPKPGSQLDSMLGSLQSDLNK 294.1 1.0488e-52 105835780000.0 3932700.0 4708970.0 3554102.0 3055730.0 3316685.0 4504920.0 3145950.0 4374770.0 5114400.0 4604600.0 True False 3714545.291356913 4482744.0128919305 3783205.101684264 3346145.660461273 3577689.2401437717 4476803.1232647775 3463973.3275132347 4359594.943948996 4185753.883532158 4563806.826324594 0.8139137857305797 0.9822378955732562 0.8289582021443755 0.733191782167531 0.7839265280702119 0.9809361556326248 0.7590096293148549 0.9552540477397775 0.9171628078971746 1.0 22.121806296839996 -7.298181140203501 23.8071020957385 0.9521564329640994 0.8444527845462997 0.30360325286541545 0.0810254845438226 481.25160320141464 311827.10066738614 0.04525045331258515 0.021739060097870633 5.03290647139833e-08 7.298181140203501 -0.10770364841779967 TGST(ph)SSKEDDYESDAATIVQK ddPTM_KYSE-520_SHP099_60min_R1 1 TGSTSSKEDDYESDAATIVQK 21 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 TGS(0.105)T(0.446)S(0.446)S(0.003)KEDDYESDAATIVQK 346.52 5.280499999999999e-65 3117400000.0 1260300.0 1269900.0 1167000.0 1017600.0 1117600.0 1420700.0 1513800.0 1802100.0 2006100.0 1757900.0 True False 1190388.6466542375 1208892.0978412398 1242226.6872660196 1114312.3980474025 1205548.7617258432 1411832.8843180928 1666829.6772642727 1795848.9357133012 1641842.809665624 1742326.3736255034 0.6832179462319844 0.6938379147218716 0.7129701450143029 0.6395543423524583 0.6919190227358428 0.810314821430553 0.9566690273968969 1.03071902193412 0.942327932653175 1.0 20.732583465079305 -6.598447954822932 2.1479390662571096 0.9925363335853125 0.6830544768274566 0.9643191666805121 0.027074328688953972 0.05313742584454027 0.497834320346355 0.012427389042855558 0.009080010871085028 2.5208792597986425e-07 6.598447954822932 -0.3094818567578559 TGSTSS(ph)KEDDYESDAATIVQK ddPTM_KYSE-520_SHP099_60min_R1 1 TGSTSSKEDDYESDAATIVQK 21 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.038)GS(0.239)T(0.199)S(0.239)S(0.286)KEDDYESDAATIVQK 127.38 2.9321e-05 2873900000.0 928270.0 731220.0 604870.0 690170.0 560350.0 962920.0 871160.0 839850.0 1077100.0 1029500.0 True False 876777.0126396323 696091.0936164036 643860.8880262185 755763.5492928224 604446.3570446282 956910.0591029614 959225.3545022752 836936.7563724634 881525.7914814039 1020379.4309388812 0.8592656673144459 0.682188480588941 0.631001437802194 0.7406691338313455 0.5923741097842979 0.9377982641442314 0.9400673175268377 0.8202211167686644 0.8639196016233746 1.0 19.960674291466606 -6.274085636588217 24.903087024983805 0.9028942184867823 0.6983530843221789 0.6342114533778211 0.08006005979327396 503.07834160869663 990662.1963022626 0.028076934717753042 0.024924106045348757 5.320033455609774e-07 6.274085636588217 -0.2045411341646034 TGTGT(ph)PVKR ddPTM_KYSE-520_SHP099_60min_R1 6 TGTGTPVKR 9 1 Q9H582;Q9H582-2;A0A087WZL9 Q9H582 ZNF644 Zinc finger protein 644 1 T(0.326)GT(0.173)GT(0.5)PVKR;TGT(0.001)GT(0.999)PVKR;TGTGT(1)PVKR;T(0.01)GT(0.194)GT(0.797)PVKR;T(0.021)GT(0.106)GT(0.873)PVKR;T(0.213)GT(0.135)GT(0.652)PVKR 145.91 0.00059915 9303190000.0 9897920.0 8772520.0 8151180.0 7064380.0 7360650.0 8051880.0 7772650.0 7644440.0 8851390.0 8341220.0 True False 9348862.646585649 8351074.971379027 8676618.10514912 7735776.55121671 7939891.278630396 8001625.230226773 8558385.315753836 7617923.221865707 7244200.70138388 8267323.28017096 1.1308209839826566 1.010130448316802 1.0495075384265966 0.9357050993482793 0.9603944359686643 0.9678616595795329 1.0352063208028872 0.9214497805035847 0.876245001663232 1.0 22.978988871452586 -1.0000000051113482 0.5494067428795046 0.9526113739096754 8.703861972106164 0.5659611274695526 0.045576722593504176 102.06363883006506 0.9383160020409158 0.02310635314823514 933.1858539177367 0.09999999882306858 1.0000000051113482 7.7512505981964885 TGTITTFEHAHNMR ddPTM_KYSE-520_SHP099_60min_R1 2 TGTITTFEHAHNMR 14 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 88.087 0.0031418 1863720000.0 1929210.0 1653220.0 1269790.0 1234590.0 1834170.0 1615020.0 1097180.0 1300490.0 1351460.0 1235450.0 False True 1822192.8755152102 1573796.8296661905 1351642.6951358342 1351925.0624069818 1978508.74400026 1604940.0611187483 1208093.661844903 1295978.9037266478 1106068.9315341727 1224504.874165557 1.4881058572812538 1.2852515844321646 1.1038279419319712 1.104058539030525 1.6157622445958177 1.3106849102682747 0.9865976749730476 1.0583697387156559 0.9032785045367068 1.0 20.22376708591327 -6.760866506957312 24.688397884867012 0.9919255617117467 1.3105442910357417 0.5404640207865739 0.14935212794692382 11.597781286970822 499858.9838446095 0.06358866191191735 0.04622485130653664 1.734337014764346e-07 6.760866506957312 0.31861872932399493 TGTLQPWNS(ph)DSTLNSR ddPTM_KYSE-520_SHP099_60min_R1 1 TGTLQPWNSDSTLNSR 16 0 Q9H0H5;F8VRD2;H0YIK5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 TGT(0.003)LQPWNS(0.974)DS(0.011)T(0.011)LNS(0.001)R 92.99600000000001 0.0017966999999999998 639500000.0 528030.0 510180.0 468840.0 429620.0 427990.0 473320.0 413950.0 417190.0 491320.0 460110.0 True False 498739.123298291 485670.18700420746 499062.1765705234 470450.95563003654 461670.37807001034 470365.83431086125 455796.105762681 415742.8652628782 402108.67316929094 456033.78336016333 1.0936451234456026 1.0649872985849342 1.0943535211214328 1.031614263670652 1.0123600376014146 1.0314276079396927 0.9994788158111202 0.9116492690510508 0.8817519399691409 1.0 18.79878117882861 -6.582454525865556 0.8788056277034756 0.9244336790685111 1.0752262945596254 0.6949399363530059 0.0367837650360415 0.331571364902338 0.5232455287743422 0.027382147566514328 0.01866195103594336 2.6154442919094576e-07 6.582454525865556 0.15079261549111422 TGVPSTAS(ph)VGK ddPTM_KYSE-520_SHP099_60min_R1 6 TGVPSTASVGK 11 0 P28290-3;P28290;E9PHV5;P28290-2;E7EUL7;H7BZ26 P28290-3 SSFA2 Sperm-specific antigen 2 1 TGVPS(0.056)T(0.161)AS(0.784)VGK;TGVPS(0.145)T(0.368)AS(0.486)VGK;TGVPS(0.001)T(0.031)AS(0.968)VGK;TGVPST(0.004)AS(0.996)VGK;TGVPS(0.04)T(0.14)AS(0.82)VGK;TGVPS(0.207)T(0.312)AS(0.481)VGK 193.34 6.720399999999999e-07 6805720000.0 20607600.0 20188000.0 16896300.0 16471200.0 15790200.0 18998800.0 17609100.0 21491500.0 22372900.0 21368400.0 True False 19464455.347767897 19218138.177194208 17985462.533035852 18036617.895753138 17032798.90605172 18880221.44195299 19389199.67625467 21416951.002653804 18310545.334912553 21179092.600363623 0.9190410427420159 0.9074108385958071 0.8492083618694344 0.8516237327109787 0.8042270378363275 0.8914556349609064 0.9154877426581429 1.011230811762261 0.8645575936807689 1.0 24.336137443862903 -6.839406726601841 2.9233108459323693 0.9544128682036694 0.8661833126747203 0.40482014740321726 0.047826125852605705 0.2674768526484092 4.610783378805983 0.02224145616694335 0.014388061553430077 1.4474156810889226e-07 6.839406726601841 -0.08822955552894918 TGVTSTS(ph)DS(ph)EEEGDDQEGEKK ddPTM_KYSE-520_SHP099_60min_R1 1 TGVTSTSDSEEEGDDQEGEKK 21 1 O75475;O75475-3;O75475-2 O75475 PSIP1 PC4 and SFRS1-interacting protein 2 T(0.001)GVT(0.018)S(0.021)T(0.158)S(0.823)DS(0.98)EEEGDDQEGEKK 96.579 0.0047922 0.0 313900.0 289670.0 309300.0 280000.0 271700.0 270240.0 277010.0 318620.0 336600.0 275770.0 True False 296487.34125586343 275753.81839646545 329237.97289749753 306611.1158149301 293081.2442384679 268553.33191956166 305012.87415707274 317514.78158646706 275481.9249954886 273326.8923458135 1.084735346424483 1.008879206981146 1.2045575540402562 1.1217744188413241 1.0722737222199898 0.9825353429906475 1.1159270554730856 1.1616668190290875 1.0078844515853513 1.0 18.060267886530863 -5.886335605445081 6.616567424523835 1.0633562932449425 1.1049706861439328 0.10514771502549503 0.06775527794424238 0.6491972776474361 35.246243902869196 0.02199811150916069 0.02503576670389509 1.2991652469701544e-06 5.886335605445081 0.04161439289899027 TGWFPSNYVREIKS(ph)S(ph)ERPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 TGWFPSNYVREIKSSERPLSPK 22 3 Q15052-2;Q15052 Q15052-2 ARHGEF6 Rho guanine nucleotide exchange factor 6 3 T(0.058)GWFPS(0.058)NY(0.099)VREIKS(0.796)S(0.989)ERPLS(0.999)PK 47.507 0.060337 87231000.0 7986.5 106690.0 45339.0 32967.0 76975.0 43905.0 48523.0 68351.0 136290.0 33026.0 True False 7543.472924306958 101564.45225504517 48261.62448496492 36100.17376811003 83032.49457216066 43630.97260926718 53428.17837884417 68113.90633424334 111543.17159131044 32733.415333839184 0.23045175235682352 3.102775900993434 1.4743840199000857 1.1028538696599237 2.536627899207427 1.3329184310371154 1.6322213198331044 2.080867689471696 3.4076239968763424 1.0 14.99847651746933 -7.51872677542995 24.870976863453304 2.3839563348927357 1.6964052528221292 0.057676727751373 0.9129042501488189 414.0609110923742 2480383.379956611 0.5475268366231716 0.217754014113668 3.0288183275642906e-08 7.51872677542995 -0.6875510820706066 TGWFPSNYVREIKSS(ph)ERPLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 TGWFPSNYVREIKSSERPLSPK 22 3 Q15052-2;Q15052 Q15052-2 ARHGEF6 Rho guanine nucleotide exchange factor 6 2 T(0.003)GWFPS(0.003)NY(0.003)VREIKS(0.014)S(0.978)ERPLS(1)PK 58.477 0.054385 79995000.0 8926.6 66379.0 29901.0 17749.0 37629.0 29867.0 33361.0 44432.0 64530.0 21248.0 True False 8431.423703264078 63190.053203089665 31828.466303291567 19435.85962356856 40590.18822027716 29680.588974398892 36733.455451983995 44277.87576250677 52812.978668921176 21059.759250693864 0.4003570792475362 3.000511660692784 1.5113404633171628 0.9228908741171009 1.9273813977213352 1.4093508202578808 1.7442485934768568 2.1024872713608027 2.5077674459731125 1.0 14.362201323519189 -7.033759658492413 5.636713965693296 1.9724514453172985 1.5840321890454383 0.035335942445537505 0.7244203639381717 0.6441813765350052 57.78280575993845 0.326210559963105 0.19318390760119977 9.252100497950068e-08 7.033759658492413 -0.38841925627186025 TGYES(ph)GEYEMLGEGLGVK ddPTM_KYSE-520_SHP099_60min_R1 8 TGYESGEYEMLGEGLGVK 18 0 Q13561;Q13561-3;Q13561-2;F8VW18;F8W1I6;H0YHL1;F8VX93;F8VRV7 Q13561 DCTN2 Dynactin subunit 2 1 TGYES(1)GEYEMLGEGLGVK;TGYES(1)GEYEMLGEGLGVK;TGYES(1)GEYEMLGEGLGVK;TGYES(1)GEYEMLGEGLGVK;TGYES(1)GEYEMLGEGLGVK;TGYES(1)GEYEMLGEGLGVK;T(0.002)GYES(0.955)GEY(0.043)EMLGEGLGVK;TGYES(1)GEYEMLGEGLGVK 453.79 1.1644999999999997e-136 2581196000.0 1877129.0 1819526.0 1566646.0 1522123.0 1518318.0 1701390.0 1577989.0 1651280.0 2015623.0 1667034.0 True False 1773000.9124061097 1732113.2397957917 1667634.5078822286 1666785.1122770333 1637800.9885523075 1690770.9939114237 1737507.5278085412 1645552.0950916493 1649636.6729209195 1652265.3756928267 1.073072726990152 1.0483262950840952 1.009301854541954 1.0087877751345593 0.9912457239900376 1.0233047419531205 1.0515910781462516 0.9959369235112354 0.9984090311335097 1.0 20.65601399061451 -4.59112083374767 2.8077611940364613 1.0107729706387423 1.0713130098252917 0.6164940313245328 0.016547820226903258 0.19632620715521543 2.9201504458288823 0.004715381333888076 0.019253466953585468 2.5637706194114608e-05 4.59112083374767 0.06054003918654938 THDHQLESS(ph)LS(ph)PVEVFAK ddPTM_KYSE-520_SHP099_60min_R1 4 THDHQLESSLSPVEVFAK 18 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 2 T(0.091)HDHQLES(0.465)S(0.509)LS(0.934)PVEVFAK;THDHQLES(0.013)S(0.987)LS(1)PVEVFAK;THDHQLES(0.419)S(0.581)LS(1)PVEVFAK;T(0.002)HDHQLES(0.372)S(0.628)LS(0.998)PVEVFAK 146.99 3.0505000000000003e-06 1383090000.0 1058922.0 1074310.0 996735.0 1136974.0 1061471.0 1058801.0 1005161.0 1127096.0 1220096.0 1118437.0 True False 1000181.485751327 1022698.5350278144 1060986.1329323868 1245031.6671163014 1145002.7287561686 1052192.6302167107 1106772.4833060058 1123186.367042184 998557.3225172173 1108528.5183108202 0.9022604914805504 0.9225730489876852 0.957112167532795 1.1231390501468426 1.0329032675685492 0.9491795771028477 0.9984158864875301 1.013222798050969 0.9007953390669845 1.0 20.08021445517789 -5.004872469360269 20.764886372695255 1.0048823068288673 0.9192728237687139 0.3097335867660842 0.05398356118618044 29.16256643394655 124307.18313817587 0.014942213951345243 0.029565217443684545 9.888434260472557e-06 5.004872469360269 -0.08560948306015337 THDHQLESSLS(ph)PVEVFAK ddPTM_KYSE-520_SHP099_60min_R1 4 THDHQLESSLSPVEVFAK 18 0 Q5JW53;Q9H410-4;Q9H410 Q5JW53 DSN1 Kinetochore-associated protein DSN1 homolog 1 THDHQLES(0.005)S(0.012)LS(0.983)PVEVFAK;THDHQLES(0.002)S(0.018)LS(0.98)PVEVFAK;T(0.001)HDHQLES(0.025)S(0.101)LS(0.873)PVEVFAK;THDHQLES(0.016)S(0.072)LS(0.912)PVEVFAK 213.2 2.3359e-18 2402230000.0 1402220.0 1659110.0 1501430.0 2384630.0 1418800.0 1563280.0 1526440.0 1522470.0 1792410.0 1491770.0 True False 1324436.0613437297 1579403.865225117 1598214.5801729395 2611264.5182348476 1530451.488132272 1553522.9896507275 1680747.4518187842 1517188.906917169 1466953.526979096 1478554.0783794965 0.8957643691973168 1.068208385692698 1.0809307576524976 1.7660933451259408 1.035100109297088 1.0507042064727166 1.1367507461484891 1.0261301423482707 0.9921541243773006 1.0 20.49575558057621 THDMFVADNGKPVPLDEESHK ddPTM_KYSE-520_SHP099_60min_R1 1 THDMFVADNGKPVPLDEESHK 21 1 B7Z982;D6RA26;O43660-2;O43660 B7Z982 PLRG1 Pleiotropic regulator 1 0 90.22 0.008174299999999999 438690000.0 309320.0 289060.0 196350.0 193910.0 312580.0 311980.0 240730.0 288470.0 260390.0 257120.0 False True 292161.4029858675 275173.12371209415 209007.03517110797 212339.14809883243 337178.2676630857 310032.81709689484 265065.33769839356 287469.3648994041 213109.73989772814 254842.11683633298 1.146440810541148 1.0797788337663916 0.820143223442687 0.8332184284719422 1.3230869051351957 1.2165682068007893 1.0401158999500315 1.128029261678223 0.8362422292803093 1.0 17.95924420073472 -4.521179667658555 24.98692643919738 1.034438456165921 1.1297753874596483 0.05145798853493733 0.15888300087090382 213.70051763659475 3142628.622092202 0.04360979838802524 0.11926702447103613 3.0117598011751775e-05 4.521179667658555 0.09533693129372733 THFEYEK ddPTM_KYSE-520_SHP099_60min_R1 2 THFEYEK 7 0 A0A087X0K9;G5E9E7;Q07157-2;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 0 ; 120.92 0.0042229 1254720000.0 2078790.0 2028230.0 1496290.0 1364370.0 2110900.0 2084590.0 1643880.0 1943630.0 1875270.0 1837090.0 False True 1963475.3747348753 1930790.7863647041 1592743.247548649 1494039.3145872017 2277015.8206219403 2071579.3005706011 1810059.4331227334 1936888.0011766541 1534768.2397097135 1820814.811834394 1.0783498475370796 1.0603993189288228 0.8747420315325903 0.8205333704870404 1.250547725019846 1.137721028578174 0.9940930957713239 1.0637479377846895 0.8429018864161696 1.0 20.796152768061706 -7.745602949980143 24.991279963585946 0.9214508899264775 1.0326146616061467 0.12351830141764364 0.12087234229366002 484.11173139160815 763977.8811770878 0.08783059880353328 0.03296001264922279 1.7963751969996705e-08 7.745602949980143 0.11116377167966918 THHDLTTPAVGGAVLVS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 2 THHDLTTPAVGGAVLVSPSK 20 0 Q8TC05-4;Q8TC05 Q8TC05-4 MDM1 Nuclear protein MDM1 1 THHDLTTPAVGGAVLVS(0.928)PS(0.072)K;THHDLTTPAVGGAVLVS(0.997)PS(0.003)K 129.78 1.3973e-05 414730000.0 365686.0 499110.0 397800.0 486470.0 439120.0 412848.0 422782.0 473149.0 501310.0 425214.0 True False 345400.66860303207 475132.00642061606 423442.8245025044 532703.9625374612 473676.2457489738 410271.26249381027 465520.93051469454 471507.75655280676 410284.7409966971 421446.93477148586 0.8195590953587382 1.1273827550276025 1.0047358031731817 1.2639882238704627 1.1239285581844543 0.9734826110819024 1.1045778059036215 1.1187832148036965 0.9735145925765457 1.0 18.68499146441428 -4.255494665477763 24.755462369184784 1.0831461551067856 0.8195589625788025 0.44036331866515055 0.08669480669704528 544.4741237604559 2267269.8201625985 0.021344080059075028 0.18875283099346954 5.552714375830109e-05 4.255494665477763 -0.2635871925279831 THHDNWQEHK ddPTM_KYSE-520_SHP099_60min_R1 6 THHDNWQEHK 10 0 Q14997-3;Q14997-2;Q14997;Q14997-4 Q14997-3 PSME4 Proteasome activator complex subunit 4 0 ;;;;; 214.26 5.133800000000001e-09 3772150000.0 2061150.0 3055820.0 2982780.0 3378580.0 3111450.0 3008420.0 3005520.0 2946090.0 3057180.0 1392710.0 False True 1946813.9006993393 2909013.820320668 3175054.771416742 3699679.2273928863 3356303.413271186 2989643.3348632655 3309347.2926485133 2935870.7014125786 2502073.177236209 1380371.6729119834 1.4103548623193705 2.1074134433546545 2.3001448332525967 2.6802051215584375 2.431449064867324 2.1658248959545943 2.3974320522437487 2.126869711270711 1.8126083187131214 1.0 20.39662534246645 -8.129171441670621 1.8375491897110092 1.0019938505654067 2.238536293455341 0.5793530709319521 0.31213187231382683 0.39216256430235646 2.7164427907972524 0.31407597017057975 0.0885948238184627 7.427258822652347e-09 8.129171441670621 1.2365424428899345 THHHLCCR ddPTM_KYSE-520_SHP099_60min_R1 1 THHHLCCR 8 0 Q16610-2;Q16610;Q16610-4 Q16610-2 ECM1 Extracellular matrix protein 1 0 61.998999999999995 0.055115 34086000.0 34869.0 32315.0 29023.0 26448.0 28232.0 45892.0 27062.0 30737.0 28713.0 18187.0 False True 32934.74706037181 30762.538894196092 30893.86901844189 28961.609968118853 30453.69778189334 45605.57100522693 29797.69105966824 30630.38052106973 23499.442995827263 18025.877329271883 1.8270815039271178 1.706576513989773 1.7138621579474478 1.6066685376299903 1.689443305621533 2.5300056231476122 1.6530508066467493 1.6992449222612664 1.3036504446675092 1.0 14.137781857478108 -7.867350513811699 1.909380353074922 1.0029235347140388 1.8211515518114967 0.5450804081421221 0.24837820726565601 0.251941187865978 1.9387535500056925 0.2463735738636912 0.07065327012410001 1.357217610547764e-08 7.867350513811699 0.8182280170974578 THHNDTELIR ddPTM_KYSE-520_SHP099_60min_R1 4 THHNDTELIR 10 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 0 ;;; 170.52 6.8625e-05 1170530000.0 808376.0 882725.0 719950.0 656111.0 972728.0 904386.0 718388.0 808288.0 654389.0 697319.0 False True 763533.7718223961 840317.566002763 766359.1289607297 718467.5921730356 1049276.1595347677 898741.391509046 791009.6698312379 805484.2375838378 535568.4534042567 691141.2961659727 1.1047433803449633 1.2158404810482728 1.1088313391371913 1.0395379297383218 1.5181789387430722 1.3003728709233713 1.1444977665482783 1.1654407601631815 0.7749044318075934 1.0 19.39862115818981 -7.671973889461987 6.250107925543852 0.8905345503988017 1.206408299977387 0.4600960368842497 0.1355434944313236 0.18039162114629537 9.977436846142115 0.09968704211946 0.03618319200964881 2.128266997242039e-08 7.671973889461987 0.3158737495785854 THHNDTELIRK ddPTM_KYSE-520_SHP099_60min_R1 2 THHNDTELIRK 11 1 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 0 ; 132.17 0.0001406 1358470000.0 747350.0 1091400.0 814890.0 625420.0 849350.0 953000.0 585140.0 688540.0 911080.0 547870.0 False True 705893.0056947103 1038967.5057752013 867419.1132700999 684859.72876062 916189.0128595615 947051.9735025999 644291.6616160765 686151.6154464446 745650.8384577824 543016.2980364101 1.299948101460813 1.9133265604222007 1.5974089846046169 1.2612139474213333 1.6872219419059307 1.7440581008842915 1.186505200572959 1.2635930411805743 1.3731647487453227 1.0 19.050635974019748 -7.5804071659334955 0.5867914334420161 1.020618333275629 1.6019961076919398 0.39672719604166184 0.21226541436414123 0.7771306699753695 0.6183017118455979 0.21590492164927566 0.11004449755090048 2.6278031812772362e-08 7.5804071659334955 0.5813777744163109 THILLFLPK ddPTM_KYSE-520_SHP099_60min_R1 3 THILLFLPK 9 0 H7BZ94;P07237;I3L398;I3L312;I3L4M2 H7BZ94 P4HB Protein disulfide-isomerase 0 ;; 105.78 0.0068279 0.0 310960.0 351961.0 335954.0 272403.0 457352.0 455117.0 294990.0 315687.0 285538.0 247311.0 False True 293710.4289166082 335052.26525576843 357610.1323854053 298292.09921905136 493343.0004230836 452276.44598592125 324810.4680249623 314591.9554788996 233691.4970272183 245120.01694504655 1.198231105632043 1.366890674338048 1.458918520169562 1.216922644411882 2.0126589683358507 1.8451224490871225 1.3251078882626772 1.2834200951831198 0.9533758194852344 1.0 17.90312877654524 -7.481727733740768 2.041658406411711 0.9762414122037385 1.5113454438331226 0.4083789431328023 0.24558515954013643 0.3717358982790167 2.8184997260390463 0.22473275628515105 0.07577713320993788 3.2981641464132714e-08 7.481727733740768 0.5351040316293841 THKHS(ph)PEKR ddPTM_KYSE-520_SHP099_60min_R1 7 THKHSPEKR 9 2 Q86X95 Q86X95 CIR1 Corepressor interacting with RBPJ 1 1 THKHS(1)PEKR;THKHS(1)PEKR;THKHS(1)PEKR;T(0.005)HKHS(0.995)PEKR;T(0.002)HKHS(0.998)PEKR;T(0.001)HKHS(0.999)PEKR;THKHS(1)PEKR 125.61 0.00040351 16947180000.0 2400631.0 2349182.0 1162605.0 1051884.0 3601690.0 5722270.0 2251625.0 1265619.0 1345802.0 3525690.0 True False 2267463.2128907465 2236323.770525927 1237548.378533771 1151854.7390995447 3885122.5121871475 5686555.19036172 2479241.2287423504 1261228.8630866965 1101438.281707601 3494455.12954531 0.648874611014331 0.639963510081445 0.3541463068363387 0.3296235597248665 1.1117963654301293 1.6273081151571804 0.70947862737758 0.3609228953673257 0.31519600077134696 1.0 21.73663609125268 -7.016528305327292 24.57729636873519 0.5098757377109276 0.787810500469243 0.05805677356665495 0.3935979988411122 1695.4826760207757 2521144.7217657054 0.200925407866509 0.12004988163912164 9.626572693323243e-08 7.016528305327292 0.2779347627583153 THLENNR ddPTM_KYSE-520_SHP099_60min_R1 1 THLENNR 7 0 Q13200;Q13200-3;Q13200-2 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 89.12299999999999 0.013041999999999998 284730000.0 428320.0 452010.0 253200.0 187920.0 549530.0 567090.0 340670.0 408900.0 343360.0 829740.0 False True 404560.2357652481 430294.7611191583 269521.6771343241 205779.86029979176 592774.884602007 563550.5809586456 375108.2482188002 407481.6213379773 281014.4794012206 822389.1491279514 0.4919328473560691 0.5232252414510042 0.3277300988469032 0.2502220031939837 0.7207960917657732 0.6852602342288026 0.45612013317121114 0.49548516267519394 0.3417049941614672 1.0 19.649461703702833 -5.764817919460228 24.999993821258105 0.5867482545162638 0.402163287721423 0.2453021617681288 0.1830929913803577 152.8703658258924 1131187.1577801416 0.056445065284481295 0.06663133235488665 1.7186287814516852e-06 5.764817919460228 -0.18458496679484077 THLGEQAGKDS(ph)S ddPTM_KYSE-520_SHP099_60min_R1 1 THLGEQAGKDSS 12 1 Q5VV50;Q5VV52-3;Q5VV52 Q5VV50 ZNF691 Zinc finger protein 691 1 THLGEQAGKDS(0.805)S(0.195) 59.728 0.026389 70786000.0 71990.0 86446.0 70690.0 88377.0 88573.0 92703.0 100060.0 87037.0 121880.0 92127.0 True False 67996.57119149283 82293.00440190865 75246.79050799912 96776.3235084861 95543.19118856762 92124.4061905682 110175.04129149369 86735.08896158861 99749.66434477156 91310.82645372149 0.7446715119368141 0.9012403851542918 0.8240730418329528 1.0598559586746776 1.046351181992545 1.0089100029913656 1.206593408146766 0.9498883355912678 1.0924188096723348 1.0 16.478498305970255 -5.261675264726498 24.998558891870157 1.054324839404417 0.8311195082825108 0.6736535722538899 0.07286396004206215 11.908323694360126 1262058.97520562 0.019266745236532837 0.03072380575543579 5.474251364248012e-06 5.261675264726498 -0.2232053311219061 THLMSESEWR ddPTM_KYSE-520_SHP099_60min_R1 1 THLMSESEWR 10 0 P61024;Q5T179;Q9BZU3 P61024 CKS1B Cyclin-dependent kinases regulatory subunit 1;Cyclin-dependent kinases regulatory subunit 0 158.79 6.6455e-05 0.0 184510.0 231000.0 172690.0 233020.0 206740.0 216710.0 164750.0 148830.0 206150.0 193140.0 False True 174274.86248843392 219902.4132619311 183821.87371376943 255166.15073998217 223009.26181030835 215357.43250550693 181404.53780505297 148313.74346718326 168718.35661859773 191428.92986064614 0.9103893680819309 1.1487417989643085 0.9602617214001332 1.3329550080321433 1.1649715744253057 1.1249994066324247 0.9476338708945895 0.7747718360811541 0.881362899230639 1.0 17.54644934925846 -6.880434060022961 3.9151492371655223 0.8692575160047553 1.1152425367934677 0.41715231529368835 0.11996570169285348 0.2052459833048383 5.826231040077777 0.0534440698069775 0.034995426970931186 1.316939851691715e-07 6.880434060022961 0.24598502078871243 THNDIIHNENMR ddPTM_KYSE-520_SHP099_60min_R1 9 THNDIIHNENMR 12 0 E7EQR4;P15311 E7EQR4 EZR Ezrin 0 ;;;;;;;; 276.12 4.485e-22 20370480000.0 3757854.0 4285370.0 2829360.0 2968609.0 3893140.0 4094500.0 3019115.0 4456190.0 3569760.0 3379270.0 False True 3549398.3475237754 4079494.3927284954 3011745.072736063 3250744.70681516 4199507.969063483 4068944.7067223387 3324316.6079229247 4440732.516972565 2921581.5703264847 3349332.2968322807 1.059733114830294 1.2180022855859316 0.8992076049260626 0.9705650018332422 1.2538343755963774 1.2148524977860962 0.9925311415254272 1.3258560582873502 0.8722877610829023 1.0 21.675442086369035 -2.9782829853005235 14.624488969206237 1.091541242284869 0.5760743790168207 0.0 0.15209690306534976 0.0 0.0 0.033617861248901114 0.0 0.001051276641121719 2.9782829853005235 -0.5154668632680482 THPQYSR ddPTM_KYSE-520_SHP099_60min_R1 1 THPQYSR 7 0 P19367-4;P19367-2;P19367;P19367-3 P19367-4 HK1 Hexokinase-1 0 79.116 0.027676 289500000.0 462450.0 458860.0 305150.0 434600.0 454860.0 425280.0 382330.0 373820.0 479170.0 301320.0 False True 436796.9766287808 436815.67683709867 324820.4572572625 475904.25333274493 490654.8942006239 422625.6697703941 420979.6475812187 372523.3056702443 392164.8068927159 298650.5392234124 1.4625688530969796 1.4626314687827457 1.0876272251237191 1.5935154665055997 1.6429064400033722 1.4151177187536879 1.4096061861328004 1.2473552086626896 1.3131227149713867 1.0 18.18809880105228 -8.080213882586486 0.87780447820795 1.0062893756947584 1.442250271790922 0.4584185221329501 0.143395798465909 0.6769274441316072 1.1583591598124552 0.1456705518237056 0.051104230993116534 8.31354242556919e-09 8.080213882586486 0.4359608960961636 THPYS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 12 THPYSPK 7 0 M0QZ39;M0R1C6;H0YD59;E9PME6;M0QXT0;B1AQP1;B4DLJ1;Q15853-4;P22415-2;Q15853-3;P22415;Q15853-2;Q15853 M0QZ39 USF2;USF1 Upstream stimulatory factor 2;Upstream stimulatory factor 1 1 THPY(0.003)S(0.997)PK;T(0.001)HPY(0.003)S(0.996)PK;T(0.018)HPY(0.015)S(0.967)PK;THPYS(1)PK;THPYS(1)PK;THPYS(1)PK;THPYS(1)PK;THPYS(1)PK;THPYS(1)PK;THPYS(1)PK;THPYS(1)PK;THPYS(1)PK 148.94 0.0013857000000000001 22545170000.0 59887800.0 52290880.0 48120700.0 45864860.0 49735600.0 51251350.0 47841920.0 51184460.0 60077500.0 48413600.0 True False 56565704.350630425 49778747.634588934 51222637.317842275 50223842.50462697 53649508.76314595 50931471.31392695 52678248.16574395 51006913.054802805 49168940.43053017 47984693.169210814 1.1788280931829649 1.0373880574593164 1.067478688197783 1.046663825222767 1.1180546382563918 1.0614107947783424 1.0978135877618727 1.0629829990771138 1.024679688106857 1.0 25.516070932322755 -8.311049705210728 0.011040622122844823 5.324445750426877e-07 2.0895006255521476 0.3741198949095753 0.0384454647050482 2006.521171931312 10.97276769458025 1060.8513412850732 1014.2973751805142 4.885964360473747e-09 8.311049705210728 2.0895000931075725 THQQQHQAAVR ddPTM_KYSE-520_SHP099_60min_R1 1 THQQQHQAAVR 11 0 A0A0C4DFM2;Q6ZN55;Q6ZN55-2 A0A0C4DFM2 ZNF574 Zinc finger protein 574 0 79.286 0.012875999999999999 80297000.0 35897.0 26658.0 20459.0 23513.0 26593.0 17876.0 23092.0 19626.0 47492.0 13752.0 False True 33905.721851104616 25377.309665526212 21777.819875557398 25747.668450558784 28685.717806527704 17764.42925323449 25426.364716201988 19557.921986742833 38868.649975893444 13630.16797889411 2.487549816231654 1.8618486364087505 1.5977660663668762 1.889020626189512 2.1045755159398363 1.3033169716427675 1.8654476419934019 1.4348995564124865 2.8516633130332907 1.0 13.734515721650325 -4.273035870446789 4.062289245114555 1.7738108774943881 2.541876644774531 0.17314753719987852 0.475348107612425 0.3731974251135703 13.270151030174157 0.11119304249839644 0.8267372810437882 5.332908466411598e-05 4.273035870446789 0.7680657672801428 THRPRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 THRPRSPR 8 2 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4 Q99700 ATXN2 Ataxin-2 1 T(0.003)HRPRS(0.997)PR;T(0.005)HRPRS(0.995)PR;T(0.008)HRPRS(0.992)PR;T(0.001)HRPRS(0.999)PR 57.836000000000006 0.033089999999999994 1279480000.0 512434.0 570030.0 286559.0 302465.0 405312.0 513188.0 307627.0 419951.0 420136.0 190439.0 True False 484008.2645081469 542644.9031675261 305031.0516506111 331211.1826605821 437207.74849018006 509985.0033345767 338724.9393101969 418494.2879982998 343849.8931666803 188751.85861929983 2.5642569458580007 2.8749115751066876 1.6160426386361515 1.7547439536932636 2.3163096336550493 2.7018806970435354 1.7945515439579485 2.217166448370585 1.8217033500062274 1.0 17.526131325007746 -10.481882305465568 0.24276979931511805 1.0490891897267016e-10 2.3986872524671377 0.48704395710743453 0.38975955069007145 21.497024626515365 0.979196673596443 14.120157260122593 0.7394231674305154 3.296990490680472e-11 10.481882305465568 2.3986872523622287 THS(ph)AGTSPT(ph)ITHQK ddPTM_KYSE-520_SHP099_60min_R1 1 THSAGTSPTITHQK 14 0 P35568 P35568 IRS1 Insulin receptor substrate 1 2 T(0.004)HS(0.996)AGT(0.008)S(0.122)PT(0.871)ITHQK 132.23 0.0011409 0.0 226500.0 212400.0 256540.0 212910.0 241590.0 257200.0 251490.0 267440.0 283480.0 271830.0 True False 213935.5934834443 202195.9851811002 273076.9788785132 233144.90238627448 260601.75854093305 255594.71939650428 276913.0635058741 266512.3130609654 232007.17794926016 269421.79768054007 0.7940545097880792 0.7504811671580073 1.0135667612251151 0.8653527828610216 0.9672630825881982 0.9486786948826209 1.0278049730564733 0.9892010050982418 0.8611299454855419 1.0 18.0395070517903 -4.75499423734421 24.999346567257522 0.9577604414812027 0.7722677625210248 0.6521324476695475 0.05458207018620367 87.41321582325305 339048.2952528853 0.01375559981151137 0.03458304071295245 1.7579469400112315e-05 4.75499423734421 -0.18549267896017785 THS(ph)GEKPYECYICHAR ddPTM_KYSE-520_SHP099_60min_R1 3 THSGEKPYECYICHAR 16 1 A0A2R8Y595;A0A2R8YFL0;P49711-2;P49711 A0A2R8Y595 CTCF Transcriptional repressor CTCF 1 T(0.004)HS(0.996)GEKPYECYICHAR;T(0.082)HS(0.918)GEKPYECYICHAR;T(0.055)HS(0.945)GEKPYECYICHAR 181.61 2.9126999999999997e-09 3141990000.0 1806030.0 1873850.0 1833650.0 1836300.0 1777650.0 1784480.0 1787910.0 2146780.0 2223220.0 1740100.0 True False 1705845.915668453 1783827.433293807 1951850.0129437314 2010821.399896275 1917540.9415550702 1773342.3984007547 1968649.3911200713 2139333.321242221 1819539.2908154184 1724684.0677773147 0.9890773316337645 1.0342922895975455 1.1317145263939132 1.1659071000103338 1.1118215662688296 1.0282128950643976 1.1414550803250398 1.2404204116057531 1.0549986080409197 1.0 20.717900678696058 -4.622807751599968 3.806676366090901 1.1181851791190487 0.9974956976881602 0.25844021688879104 0.06652714541231845 0.2656861723541647 7.064671094256427 0.017250816067019777 0.05409748815520656 2.3833742801168227e-05 4.622807751599968 -0.12068948143088853 THS(ph)LPNRPSK ddPTM_KYSE-520_SHP099_60min_R1 2 THSLPNRPSK 10 1 A0A2R8YFA9;Q6ZW33 A0A2R8YFA9 MICALCL MICAL C-terminal-like protein 1 T(0.005)HS(0.995)LPNRPSK;T(0.091)HS(0.909)LPNRPSK 67.275 0.030768 0.0 974760.0 924580.0 964760.0 1115340.0 1111750.0 799250.0 750830.0 833400.0 952180.0 852430.0 True False 920688.1196641156 880161.7889771272 1026949.9732705777 1221341.5782608 1199238.4000077895 794261.584283265 826731.2237946463 830509.1299170231 779288.1145044682 844878.1333805053 1.0897289008774333 1.0417618283662353 1.2155007127022819 1.44558313205953 1.419421751642958 0.9400901182106411 0.9785212696732368 0.9829928093818818 0.9223674796581609 1.0 19.6883837341192 -6.283586173069704 24.625555595107098 0.9645892840493638 1.241046373519104 0.5772540303614624 0.11877987018744053 576.3432357418275 640847.6540675208 0.04837767001522367 0.04270063182173655 5.204917221574868e-07 6.283586173069704 0.2764570894697401 THS(ph)QGGYGSQGYK ddPTM_KYSE-520_SHP099_60min_R1 3 THSQGGYGSQGYK 13 0 K7EPH2;K7ER00;Q9Y285;K7ERS0;Q9Y285-2 K7EPH2 FARSA Phenylalanine--tRNA ligase alpha subunit 1 T(0.001)HS(0.998)QGGYGS(0.001)QGYK;T(0.141)HS(0.858)QGGYGSQGYK;THS(1)QGGYGSQGYK 222.42 1.7156e-11 1532480000.0 933480.0 1113160.0 1007410.0 1724520.0 1030160.0 1057170.0 1086380.0 1102320.0 1179790.0 969730.0 True False 881698.0035537536 1059682.1227127744 1072349.2605129897 1888417.862304155 1111227.7311913865 1050571.8098926998 1196201.8924470604 1098496.309203423 965569.8760856435 961138.946638524 0.9173470772747206 1.102527502832857 1.1157068020845595 1.964770930268392 1.1561572185559448 1.093048839157915 1.2445670801611388 1.1429110359592556 1.0046100820933501 1.0 19.874385483100887 -7.537588373476309 1.248325323673801 0.9852247278504466 1.2486594912919826 0.0995414530969887 0.26356929083449104 1.1433873213030197 3.2223579532174673 0.2565893636036875 0.08712712772302995 2.9000910065255766e-08 7.537588373476309 0.26343476344153605 THT(ph)GEKPYACSHCDK ddPTM_KYSE-520_SHP099_60min_R1 2 THTGEKPYACSHCDK 15 1 A0A2R8Y595;A0A2R8YFL0;P49711-2;P49711 A0A2R8Y595 CTCF Transcriptional repressor CTCF 1 T(0.001)HT(0.999)GEKPYACSHCDK;T(0.002)HT(0.998)GEKPYACSHCDK 180.86 1.0465e-08 2017310000.0 1478970.0 1488120.0 1379890.0 1488550.0 1539950.0 1438450.0 1497500.0 1740600.0 1726800.0 1395400.0 True False 1396928.5858463983 1416628.4814863428 1468839.9173020625 1630021.3444511222 1661135.303883066 1429472.0999840633 1648881.9141916044 1734562.2648590927 1413256.6490855883 1383037.8416047709 1.010043647269629 1.0242875783084835 1.0620388489137316 1.1785804375097724 1.201077261888664 1.0335741054817515 1.1922174973017141 1.2541683334177176 1.0218495883277885 1.0 20.399409200251235 -5.047006521496187 3.995187633136542 1.138309654096448 1.0204769217695593 0.22019564548687043 0.08112663579155806 0.284292453196755 9.488045488422054 0.021725694397757636 0.042315107020327904 8.974153185420069e-06 5.047006521496187 -0.11783273232688862 THT(ph)GEKPYECK ddPTM_KYSE-520_SHP099_60min_R1 3 THTGEKPYECK 11 1 Q7L945;K7EN93;K7ER43;C9JVC3;M0QY24;A0A0A0MSW5;D3YTF2;A0A0A0MTT2;A0A087WUM7;A0A494C1V2;M0R1L6;S4R3U0;G3V131;A0A494C0J2;C9JME7;A0A494C0W3;A0A0C4DG37;F5H0A9;A0A1W2PRV3;A0A3B3ISA9;Q96GE5;Q8IYI8;Q08ER8;P17030-2;Q7Z3V5;Q96MU6-2;Q96GE5-2;Q9BUY5;Q96MU6;Q96I27;Q86UE3;Q0D2J5-3;Q9BY31;Q68EA5;Q8TBZ8;Q8TA94;Q96SR6;Q8NDP4;P17030;Q0D2J5-2;Q0D2J5;P58317;Q9ULM2;P17024;Q147U1;Q9BS34;P52737;A8MT65;Q15935;Q96I27-2;Q96SR6-2;Q96SR6-3;Q9BR84;P17017;C9J2N8;A0A3F2YPB8;F8W7T7;Q15973-4;P16415;Q9Y2A4;P15621;Q32M78;Q8N972;Q8N7K0-2;P15621-3;Q9H7R0;Q8NDW4;P15621-2;Q15973-1;Q9H7R0-2;Q14584;Q6ZMS4;C9JN71;P16415-2;Q15973;Q8N7K0;K7EQV7;A0A087WVH9;Q9H0M5;Q86YE8-2;Q86YE8-4;Q86YE8-3;Q86YE8 Q7L945;P17017;K7EQV7;Q86YE8-2 ZNF627;ZNF823;ZNF426;ZNF717;ZNF546;ZNF778;ZNF799;ZNF559;ZNF57;ZNF563;ZNF382;ZNF439;ZNF440;ZNF543;ZNF25;ZNF571;ZNF625;ZNF763;ZNF564;ZNF121;ZNF490;ZNF20;ZNF846;ZNF670;ZNF136;ZNF891;ZNF77;ZNF14;ZNF44;ZNF124;ZNF443;ZNF699;ZNF709;ZNF433;ZNF442;ZNF248;ZNF266;ZNF852;ZNF878;ZNF700;ZNF573 Zinc finger protein 627;Zinc finger protein 799;Zinc finger protein 440;Zinc finger protein 543;Zinc finger protein 25;Zinc finger protein 571;Zinc finger protein 778;Zinc finger protein 426;Zinc finger protein 625;Zinc finger protein 546;Zinc finger protein 763;Zinc finger protein 717;Zinc finger protein 57;Zinc finger protein 564;Zinc finger protein 563;Zinc finger protein 382;Zinc finger protein 439;Zinc finger protein 121;Zinc finger protein 490;Zinc finger protein 20;Zinc finger protein 846;Zinc finger protein 670;Zinc finger protein 136;Zinc finger protein 891;Zinc finger protein 77;Zinc finger protein 559;Zinc finger protein 14;Zinc finger protein 124;Zinc finger protein 823;Zinc finger protein 443;Zinc finger protein 44;Zinc finger protein 699;Zinc finger protein 709;Zinc finger protein 433;Zinc finger protein 442;Zinc finger protein 248;Zinc finger protein 266;Zinc finger protein 852;Zinc finger protein 878;Zinc finger protein 700;Zinc finger protein 573 1 T(0.006)HT(0.994)GEKPYECK;T(0.003)HT(0.997)GEKPYECK;THT(1)GEKPYECK 180.48 9.6442e-06 2157200000.0 1175380.0 1191590.0 1130270.0 999340.0 1048950.0 1075690.0 1167410.0 1261930.0 1335870.0 1218430.0 True False 1110179.328338061 1134344.2277869466 1203129.0126959402 1094316.973137473 1131496.3972909118 1068976.219703055 1285423.1956236511 1257552.6593666768 1093309.682542256 1207635.6581241963 0.9192998905501739 0.9393099815791359 0.9962682077181654 0.9061648401780884 0.9369517947560851 0.8851810664182282 1.0644130843405875 1.0413344876881292 0.9053307387763614 1.0 20.203753830691664 -6.756522264838195 24.9999720671812 1.0062141170206622 0.9331010121630084 0.3601965588184056 0.04700263024560752 139.0872595660088 707162.0214655763 0.018504568974858183 0.013873979560911144 1.7517726243319634e-07 6.756522264838195 -0.07311310485765377 THT(ph)GEKPYECNICK ddPTM_KYSE-520_SHP099_60min_R1 1 THTGEKPYECNICK 14 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 T(0.033)HT(0.966)GEKPYECNICK 79.837 0.012334999999999999 0.0 192790.0 177060.0 169660.0 203790.0 197380.0 199000.0 151200.0 208310.0 161410.0 174150.0 True False 182095.55438266307 168553.77182752156 180596.5550655978 223158.14032830246 212912.68306142357 197757.96718469792 166484.77156979678 207587.4212299196 132102.01281497866 172607.1664866498 1.0549709962172813 0.9765166490961327 1.046286540365437 1.2928671785221761 1.2335100992338646 1.1457112193542287 0.9645298915365339 1.2026581830597127 0.7653333028046435 1.0 17.39713283953371 -6.756722701840406 24.75072747853598 1.0000185194341904 1.1272167637338135 0.21606174101722175 0.13075148106521048 194.97607545230235 1023141.2159337807 0.05335064368810824 0.039935163387982184 1.750964327069547e-07 6.756722701840406 0.12719824429962312 THT(ph)GEKPYK ddPTM_KYSE-520_SHP099_60min_R1 6 THTGEKPYK 9 1 O75362;Q99676;F8WEL6;A0A0C4DFQ3;A0A087WUV0;A0A087WT67;A0A087WXA8;F8W6Y9;A0A0M3HEQ9;H9KV89;E7EX64;A0A0A0MS50;R4GMT1;P51814-8;Q8N8J6-2;Q9P2J8;O14628-5;O14628-6;Q9NPC7;P51814;Q7Z7L9;Q8N184-1;Q96RE9-2;P17025-2;Q96RE9-3;O14628;P51814-5;P17025;P51814-3;Q2M218-2;P51814-2;Q8N184;O95125;Q96RE9;P51814-6;P51814-4;Q8N8J6;A0A087X254;E9PJ50;Q9H4T2;Q9P2J8-2;Q2M218;Q9NPC7-2;Q86XU0;Q13360-2;O95125-2;O75346-2;Q13887-4;Q9UJN7;P51814-7;Q96N95;Q8IZC7-2;Q15973-2;Q13887-2;O75840;O75840-4;O75840-2;P52743;Q6ZT77;Q8N859;Q8IZC7;Q9UC06;Q13887;Q96H40;Q13360;O75346;Q9NPC7-3;Q9HBT8-2;P36508-2;Q9HBT8;P0CG31;O14628-4;O14628-7;Q9UC07;Q96RE9-4;P36508;Q8N8J6-3;A0A087WVT1;Q96MX3;Q9Y4X4;Q9UEG4;Q9HBT7;Q6ZMW2;I3L4C4;O14978;B4DI05;A6NP11;A6NHJ4;Q9P0L1;P17017;A0A087X2B0;C9J2N8;F5H032;A0A3F2YPB8;F8W7T7;Q15973-4;P16415;Q9Y2A4;P15621;Q32M78;Q8N972;Q8N7K0-2;P15621-3;Q9H7R0;Q8NDW4;P15621-2;Q15973-1;Q9H7R0-2;Q14584;Q6ZMS4;C9JN71;Q7Z3I7;Q15937;P16415-2;Q15973;Q8N7K0;Q86YE8-2;Q86YE8-4;Q86YE8-3;Q86YE8;Q86WZ6-2;Q86WZ6;P17040-2;P17040-3;P17040;B9EG95;O95780-2;O95780-3;O95780;P57682 O75362;A0A087WVT1;Q9Y4X4;Q9UEG4;A6NP11;A6NHJ4;P17017;Q86YE8-2;P17040-2;B9EG95;P57682 ZNF217;ZNF184;ZNF567;ZSCAN2;ZNF195;ZNF630;ZNF615;ZNF76;ZNF300;MYNN;ZNF41;ZNF624;ZNF182;ZNF202;ZNF48;ZSCAN16;ZNF677;ZNF177;ZNF253;KLF5;ZNF391;ZNF396;ZNF101;ZNF124;KLF7;ZNF137P;ZNF826P;ZNF713;ZNF70;ZNF486;ZNF286A;ZNF286B;ZNF69;KLF12;ZNF629;ZNF287;ZNF782;ZNF263;ZNF716;ZNF860;ZKSCAN7;ZNF14;ZNF79;ZNF823;ZNF44;ZNF443;ZNF699;ZNF709;ZNF433;ZNF442;ZNF248;ZNF266;ZNF852;ZNF878;ZNF572;ZNF573;ZNF227;ZSCAN20;ZNF682;KLF3 Zinc finger protein 217;Zinc finger protein 184;Zinc finger protein 41;Zinc finger protein 615;Zinc finger protein 624;Zinc finger protein 195;Myoneurin;Zinc finger and SCAN domain-containing protein 2;Zinc finger protein 567;Zinc finger protein 300;Zinc finger protein 182;Zinc finger protein 630;Zinc finger protein 202;Zinc finger and SCAN domain-containing protein 16;Zinc finger protein 677;Zinc finger protein 177;Zinc finger protein 253;Krueppel-like factor 5;Zinc finger protein 391;Zinc finger protein 396;Zinc finger protein 101;Zinc finger protein 124;Krueppel-like factor 7;Putative zinc finger protein 137;Putative zinc finger protein 826;Zinc finger protein 713;Zinc finger protein 70;Zinc finger protein 486;Zinc finger protein 286A;Zinc finger protein 76;Putative zinc finger protein 286B;Zinc finger protein 69;Zinc finger protein 48;Krueppel-like factor 12;Zinc finger protein 629;Zinc finger protein 287;Zinc finger protein 782;Zinc finger protein 263;Zinc finger protein 716;Zinc finger protein 860;Zinc finger protein with KRAB and SCAN domains 7;Zinc finger protein 14;Zinc finger protein 823;Zinc finger protein 443;Zinc finger protein 44;Zinc finger protein 699;Zinc finger protein 709;Zinc finger protein 433;Zinc finger protein 442;Zinc finger protein 248;Zinc finger protein 266;Zinc finger protein 852;Zinc finger protein 878;Zinc finger protein 572;Zinc finger protein 79;Zinc finger protein 573;Zinc finger protein 227;Zinc finger and SCAN domain-containing protein 20;Zinc finger protein 682;Krueppel-like factor 3 1 THT(1)GEKPYK;T(0.006)HT(0.994)GEKPYK;T(0.012)HT(0.988)GEKPYK;THT(1)GEKPYK;T(0.006)HT(0.994)GEKPYK;T(0.291)HT(0.709)GEKPYK 174.9 0.00010329 19888300000.0 15074100.0 15664100.0 13195000.0 12946000.0 14806700.0 14129300.0 13830200.0 15600900.0 16690100.0 14815000.0 True False 14237909.623526659 14911573.123706548 14045570.812746447 14176383.947643166 15971903.05140128 14041113.7977023 15228291.585744701 15546784.119177438 13659598.563182423 14683750.625895597 0.9696371169922572 1.0155152796867288 0.95653836479464 0.9654470651825384 1.0877263894167446 0.9562348309661448 1.0370845960083779 1.0587747310118325 0.9302526930069879 1.0 23.807717182682996 THT(ph)GEKPYR ddPTM_KYSE-520_SHP099_60min_R1 5 THTGEKPYR 9 1 P52747-2;E7EN86;P52747;P52747-3;Q9UJW8-4;G5E9B8;Q8WXB4;A0A0A0MP75;A0A1W2PQ54;Q9UJW8;Q9NX65;Q99612;Q9BSK1-2;Q499Z4;Q9NX65-2;Q9BSK1;Q86TJ5;Q86UD4;O94892;Q9UJW8-2;Q9NX65-3;Q9UJW8-3;P17017;A0A087X2B0;F5H032;Q7Z3I7;Q15937 P52747-2;P17017 ZNF143;ZNF180;ZNF606;ZSCAN32;KLF6;ZNF577;ZNF672;ZNF554;ZNF329;ZNF432;ZNF14;ZNF79;ZNF572 Zinc finger protein 143;Zinc finger protein 180;Zinc finger protein 606;Zinc finger and SCAN domain-containing protein 32;Krueppel-like factor 6;Zinc finger protein 577;Zinc finger protein 672;Zinc finger protein 554;Zinc finger protein 329;Zinc finger protein 432;Zinc finger protein 14;Zinc finger protein 572;Zinc finger protein 79 1 T(0.004)HT(0.996)GEKPYR;THT(1)GEKPYR;T(0.003)HT(0.997)GEKPYR;THT(1)GEKPYR;T(0.086)HT(0.914)GEKPYR 163.99 0.0002229 1999260000.0 1842440.0 1788380.0 1643340.0 1756890.0 1826040.0 1778190.0 1632870.0 1926590.0 2014320.0 1836430.0 True False 1740236.1803869172 1702463.5403868922 1749272.3258369674 1923864.2973717605 1969738.9592536301 1767091.6566239118 1797936.4348754885 1919907.1089594844 1648570.2648749624 1820160.6589209205 0.9560893275314574 0.9353369616263408 0.9610538043790161 1.056974991708875 1.0821786250568601 0.9708437812690279 0.9877899657173078 1.0548009042771525 0.9057278855001266 1.0 20.79563436678052 -5.06562771981988 8.085911494115924 1.0112284781235004 0.946273584055443 0.23689368405742528 0.04762265692785299 0.42568784832996637 48.49009048424149 0.013013202831746019 0.02273844379890832 8.597501894247107e-06 5.06562771981988 -0.06495489406805732 THT(ph)GERPFK ddPTM_KYSE-520_SHP099_60min_R1 3 THTGERPFK 9 1 P52747-2;E7EN86;P52747;P52747-3;Q9NSC2-2;Q9BXA9;Q9BXA9-2;Q9BXA9-3;Q9BXA9-4;A0A140TA70;H3BSM9;A0A087WXW6;A9JR48;Q6NX45;A0A140TA74;Q9NSC2;Q9ULD5 P52747-2;Q9ULD5 ZNF143;SALL1;SALL3;ZNF774;ZNF777 Zinc finger protein 143;Sal-like protein 1;Sal-like protein 3;Zinc finger protein 774;Zinc finger protein 777 1 T(0.002)HT(0.998)GERPFK;T(0.02)HT(0.98)GERPFK;T(0.003)HT(0.997)GERPFK 97.911 0.0031974 781120000.0 1279030.0 1250830.0 1209050.0 1036430.0 1240240.0 1172500.0 1051650.0 1265580.0 1387180.0 1151090.0 True False 1208079.6562169066 1190738.2492658913 1286987.2975483993 1134931.9955859568 1337839.8319996968 1165181.9925832087 1157961.045114923 1261189.998368592 1135303.079962097 1140892.2381344694 1.0588902403195404 1.0436903762382743 1.128053338019739 0.9947758058567754 1.1726259389644602 1.021290139100654 1.0149609283067467 1.1054418254530574 0.9951010638993291 1.0 20.121731099030495 -7.781949272473212 24.9673411271036 0.997550416164892 1.0664860756118337 0.22441757819278674 0.05196438064829921 399.5830075664838 486410.83822287805 0.04703231124228617 0.012204043388980474 1.6521547659828265e-08 7.781949272473212 0.06893565944694169 THT(ph)GERPYK ddPTM_KYSE-520_SHP099_60min_R1 1 THTGERPYK 9 1 Q9H5H4;H3BS42;I3L538;L0B1S6;A0A087WSX5;L0B3Z2;A0A087X1C2;K7EIH1;A0A1W2PQA1;L0B1V4;A0A0G2JMF9;K7EL41;A8MWA4;A8MVS1;Q13127-3;P0CH99;P0CI00;Q9UJL9-2;O60304-2;O60304;Q6ZN79;Q9UJL9;Q6ECI4-2;Q6ECI4;Q5EBL2;Q9UEG4;Q9HBT7;Q6ZMW2;I3L4C4;O14978;B4DI05;Q13127 Q9H5H4;Q9UEG4;Q13127 ZNF768;ZNF263;REST;ZNF628;ZNF500;ZNF705E;ZNF705F;ZNF705D;ZNF705B;ZFP69B;ZNF705A;ZNF470;ZNF629;ZNF287;ZNF782 Zinc finger protein 768;Putative zinc finger protein 705E;Zinc finger protein 705F;RE1-silencing transcription factor;Zinc finger protein 705D;Putative zinc finger protein 705B;Zinc finger protein ZFP69B;Zinc finger protein 500;Zinc finger protein 705A;Zinc finger protein 470;Zinc finger protein 628;Zinc finger protein 629;Zinc finger protein 287;Zinc finger protein 782;Zinc finger protein 263 1 T(0.002)HT(0.998)GERPYK 81.565 0.016783000000000003 219720000.0 220900.0 163610.0 195800.0 159440.0 199600.0 181130.0 201160.0 220160.0 210100.0 209040.0 True False 208646.23664676724 155749.9300163831 208421.5812910768 174593.1296626161 215307.38443135124 179999.50048323796 221495.2159324094 219396.31634573045 171951.13618999426 207188.0682306592 1.0070378976384136 0.7517321404965712 1.0059535912031592 0.8426794610018001 1.039188145678606 0.8687734869116467 1.0690539171677698 1.0589235095405205 0.8299277929391367 1.0 17.660581396379648 -5.759903028116632 24.99849222934978 0.9797175700761845 0.8985639355910358 0.11965485766845996 0.10046395697688755 84.97599495741663 1382657.5460897835 0.028878737608179703 0.035302492266055724 1.738188898691641e-06 5.759903028116632 -0.08115363448514878 THTDS(ph)SEKELEPEAAEEALENGPK ddPTM_KYSE-520_SHP099_60min_R1 1 THTDSSEKELEPEAAEEALENGPK 24 1 Q9H3P7 Q9H3P7 ACBD3 Golgi resident protein GCP60 1 T(0.095)HT(0.095)DS(0.405)S(0.405)EKELEPEAAEEALENGPK 130.32 3.3768e-05 277200000.0 414680.0 502700.0 385900.0 457270.0 419830.0 454530.0 426410.0 475430.0 512600.0 423750.0 True False 391676.87375591445 478549.5374319161 410775.73146183137 500728.80331676133 452868.2324940595 451693.1096706576 469515.6841605616 473780.84429619607 419524.7615944369 419995.90467251115 0.9325730784478047 1.1394147707346378 0.9780469925822988 1.192223061572948 1.0782682103702423 1.0754702716038675 1.1179053865457644 1.1280606287473762 0.9988782198282585 1.0 18.680015734858056 -4.247775734723978 24.25408264083388 1.0842117855856352 0.9325729237476316 0.30322947789170174 0.0659757033799332 1730.6274170126046 3071925.501114585 0.015263640987705851 0.28107439388123323 5.652287778853417e-05 4.247775734723978 -0.15163886183800368 THTDSS(ph)EKELEPEAAEEALENGPK ddPTM_KYSE-520_SHP099_60min_R1 1 THTDSSEKELEPEAAEEALENGPK 24 1 Q9H3P7 Q9H3P7 ACBD3 Golgi resident protein GCP60 1 T(0.082)HT(0.082)DS(0.082)S(0.753)EKELEPEAAEEALENGPK 101.94 0.0011469000000000002 295490000.0 151920.0 160900.0 160630.0 179390.0 177140.0 145500.0 162090.0 171090.0 189810.0 177260.0 True False 143492.6947549882 153170.12248417625 170984.4668170871 196439.17166442986 191079.91021127033 144591.88052951533 178475.63904595454 170496.5287227063 155345.28872071794 175689.6143061931 0.816739767581868 0.8718222934750729 0.9732189776402728 1.1181034942798285 1.0875993493744878 0.822996174819529 1.0158576518638485 0.9704417042293902 0.8842030266512002 1.0 17.42266938501016 -4.6803524701166745 3.4003885517513948 0.987492567901689 0.8285684575912412 0.329558569043476 0.08144699142695101 0.28158659565395894 6.265346194646857 0.022665577382335888 0.07041240748806693 2.0876011618219392e-05 4.6803524701166745 -0.15892411031044784 THTGERPNACADCGK ddPTM_KYSE-520_SHP099_60min_R1 4 THTGERPNACADCGK 15 1 Q6DD87 Q6DD87 ZNF787 Zinc finger protein 787 0 ;;; 147.39 7.1157e-06 3381090000.0 1299910.0 2275340.0 1293340.0 3338850.0 1637290.0 1758650.0 2212510.0 2026250.0 3126160.0 1247350.0 False True 1227801.4009936592 2166029.2510450296 1376710.7658171672 3656173.300138146 1766135.4080942243 1747673.613011907 2436172.1028167373 2019221.4116803056 2558528.148080502 1236299.4494236168 0.9931262216173278 1.7520263816787012 1.1135738727854425 2.957352526398612 1.4285660394960347 1.4136329299723474 1.97053562059946 1.6332785819986413 2.0695052070704474 1.0 20.237596796283462 -3.9060170077135288 1.4552383431701197 1.758546446518041 2.9759436295260216e-10 0.132256658018174 0.530430227481998 5.842895913270528 5.735808335743721 0.1439542682907206 19.111500103372155 0.0001241603683319865 3.9060170077135288 -1.7585464462204465 THTGERPYK ddPTM_KYSE-520_SHP099_60min_R1 3 THTGERPYK 9 1 Q9H5H4;H3BS42;I3L538;L0B1S6;A0A087WSX5;L0B3Z2;A0A087X1C2;K7EIH1;A0A1W2PQA1;L0B1V4;A0A0G2JMF9;K7EL41;A8MWA4;A8MVS1;Q13127-3;P0CH99;P0CI00;Q9UJL9-2;O60304-2;O60304;Q6ZN79;Q9UJL9;Q6ECI4-2;Q6ECI4;Q5EBL2;Q9UEG4;Q9HBT7;Q6ZMW2;I3L4C4;O14978;B4DI05;Q13127 Q9H5H4;Q9UEG4;Q13127 ZNF768;ZNF263;REST;ZNF628;ZNF500;ZNF705E;ZNF705F;ZNF705D;ZNF705B;ZFP69B;ZNF705A;ZNF470;ZNF629;ZNF287;ZNF782 Zinc finger protein 768;Putative zinc finger protein 705E;Zinc finger protein 705F;RE1-silencing transcription factor;Zinc finger protein 705D;Putative zinc finger protein 705B;Zinc finger protein ZFP69B;Zinc finger protein 500;Zinc finger protein 705A;Zinc finger protein 470;Zinc finger protein 628;Zinc finger protein 629;Zinc finger protein 287;Zinc finger protein 782;Zinc finger protein 263 0 ;; 100.48 0.0024145 2009080000.0 463233.0 632210.0 474824.0 820650.0 503178.0 470096.0 598593.0 647630.0 944340.0 266357.0 False True 437536.54205790843 601837.6826334434 505431.914785262 898644.3292625798 542775.2459088101 467161.9564907433 659104.6221447033 645383.522687978 772871.6608741509 263997.2842026101 1.6573524359520007 2.279711643440812 1.9145345237618354 3.403990809893699 2.055987990741019 1.7695710692698277 2.4966341003677144 2.4446597041228095 2.9275742862604406 1.0 18.01016356277971 -9.614141323699673 7.976757476935788 0.9999991595442502 2.3298570450736946 0.38187884952044826 0.5067758797282831 0.0 0.0 0.4914237080433787 0.1191877561879733 2.43141267470725e-10 9.614141323699673 1.3298578855294445 THTRVS(ph)VQR ddPTM_KYSE-520_SHP099_60min_R1 10 THTRVSVQR 9 1 P15880;H0YEN5;E9PQD7 P15880 RPS2 40S ribosomal protein S2 1 THT(0.005)RVS(0.995)VQR;T(0.021)HT(0.018)RVS(0.961)VQR;THT(0.001)RVS(0.999)VQR;THTRVS(1)VQR;THTRVS(1)VQR;THTRVS(1)VQR;THT(0.001)RVS(0.999)VQR;T(0.004)HT(0.003)RVS(0.993)VQR;THTRVS(1)VQR;THTRVS(1)VQR 138.45 0.00029039 75864270000.0 3619246.0 4063359.0 4034839.0 3362946.0 3576893.0 3397017.0 3053553.0 3583481.0 4307211.0 3311428.9 True False 3418479.2095919712 3868149.134413794 4294931.177910659 3682559.376733415 3858374.1293627755 3375814.9568435266 3362235.937045413 3571050.7408017563 3525130.058353364 3282092.2161987005 1.041554893771764 1.1785619902215487 1.3085955223052883 1.1220158161791485 1.1755837055155998 1.0285557913888768 1.0244184853951284 1.0880409524074024 1.0740496689749164 1.0 21.64618434381978 -6.25724123686536 24.729243909797688 1.047353380955554 1.1715616232721064 0.45901298459082285 0.06609832217086842 300.64122020434405 1770935.6576704446 0.022946249918886726 0.022161023246960666 5.530428260613086e-07 6.25724123686536 0.12420824231655248 THTRVSVQR ddPTM_KYSE-520_SHP099_60min_R1 2 THTRVSVQR 9 1 P15880;H0YEN5;E9PQD7 P15880 RPS2 40S ribosomal protein S2 0 ; 90.15 0.018294 253940000.0 85950.0 79106.0 96418.0 86620.0 93428.0 98743.0 85577.0 86192.0 113985.0 90510.0 False True 81182.1821629228 75305.62901947316 102633.25855425453 94852.33875674743 100780.25206739639 98126.70831014392 94227.95831103495 85893.02006936395 93288.19732801763 89708.15181571445 0.9049588083109062 0.8394513485705504 1.1440795120279799 1.0573435840212222 1.1234235688460856 1.0938438293960568 1.0503834534971297 0.9574717384191813 1.039907694449637 1.0 16.452951468927484 -4.751712650598666 24.999952449787862 1.0600652277238942 0.8722050030442094 0.6563541121441322 0.05385169987724653 122.67813044390869 315304.92432662996 0.014532746424345726 0.03744235326300621 1.771280532163348e-05 4.751712650598666 -0.18786022467968477 THTTALAGRS(ph)PS(ph)PASGR ddPTM_KYSE-520_SHP099_60min_R1 4 THTTALAGRSPSPASGR 17 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182;I3L1I8;Q9UQ35-3;A0A087X1W1 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 T(0.094)HT(0.099)T(0.105)ALAGRS(0.723)PS(0.977)PAS(0.003)GR;T(0.001)HT(0.002)T(0.002)ALAGRS(0.995)PS(0.999)PAS(0.001)GR;T(0.002)HT(0.002)T(0.002)ALAGRS(0.994)PS(0.989)PAS(0.011)GR;THTTALAGRS(0.999)PS(0.994)PAS(0.006)GR 75.358 0.0094545 2806990000.0 1367220.0 1861810.0 3874180.0 2264180.0 1280900.0 1707270.0 974640.0 1181990.0 1589320.0 1717340.0 True False 1291377.5811145022 1772365.852966216 4123915.841707168 2479366.986449463 1381699.5426759424 1696614.29465035 1073166.1227697514 1177889.9525685408 1300739.5514968191 1702125.7036703008 0.7586852007051531 1.0412661351300059 2.422803341031013 1.4566297783431585 0.8117494140982525 0.9967620434800635 0.6304858216145134 0.6920111423196605 0.7641853646249681 1.0 20.698906154741167 -5.762102269482691 8.112386995456125 0.7994415650224332 1.465511249803964 0.3352683836423537 0.4143075983548004 0.13672451305116015 74.68200868418526 0.13419328866307687 0.16223514560662258 1.7294090627750997e-06 5.762102269482691 0.6660696847815307 THVADFAPEVAWVTR ddPTM_KYSE-520_SHP099_60min_R1 2 THVADFAPEVAWVTR 15 0 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 0 ; 91.65700000000001 0.0036366 383260000.0 432890.0 430630.0 265228.0 234327.0 477080.0 453740.0 307069.0 383030.0 349460.0 339150.0 False True 408876.7287551798 409941.8884111921 282325.0212598044 256597.36762701854 514623.48178611853 450908.0403536934 338110.5312246417 381701.3583298741 286006.8731697072 336145.3948547076 1.2163686756199916 1.2195374224548923 0.8398896000994865 0.7633523218068414 1.530955026197978 1.3414077576418675 1.0058460904121074 1.135524580055179 0.8508427530096856 1.0 18.358725859419675 -7.74924305050488 24.665772052980973 0.9254214014189338 1.128654454853961 0.12722766207945346 0.2159043926992495 383.6213012382621 775845.2786596249 0.15964408988355977 0.0593185233796655 1.781381548098718e-08 7.74924305050488 0.20323305343502718 THVDSHGHNVFK ddPTM_KYSE-520_SHP099_60min_R1 1 THVDSHGHNVFK 12 0 P49736;H0Y8E6 P49736 MCM2 DNA replication licensing factor MCM2 0 78.692 0.0067713999999999995 105100000.0 147260.0 134100.0 122640.0 254610.0 132800.0 105840.0 152620.0 140390.0 152430.0 113970.0 False True 139091.1942444679 127657.63471179624 130545.57063093805 278808.0578487119 143250.60447136022 105179.41330064544 168048.31902766105 139903.01985727245 124752.55444760055 112960.3144673184 1.231327965935414 1.1301104756461178 1.155676409423483 2.468194774098088 1.2681498378158764 0.9311182763312497 1.48767573656393 1.2385147874012787 1.104392768698372 1.0 16.785456484445806 -5.983621728489659 24.99578828969781 1.1783643281326148 1.4986285681987994 0.15131497227921809 0.38244448849397483 533.476747379503 814164.1833952199 0.1249382346150607 0.1416310766623724 1.0384324991690535e-06 5.983621728489659 0.3202642400661846 THYDPPR ddPTM_KYSE-520_SHP099_60min_R1 4 THYDPPR 7 0 P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;D6RBM0;E7EN40;E5RGV0;P55795 P31943;P55795 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 0 ;;; 101.64 0.0081911 4697060000.0 1885410.0 1778210.0 1230180.0 1165290.0 1853910.0 1787490.0 1400270.0 1634450.0 1551520.0 1491620.0 False True 1780822.5488283478 1692782.1224523732 1309479.3711575938 1276038.811242785 1999802.1696950244 1776333.6118742495 1541822.9569182463 1628780.4744334978 1269803.0786363657 1478405.4072627982 1.2045563010524032 1.1450053646560208 0.8857376770435632 0.8631183334247364 1.3526750916026269 1.20151996410988 1.0428959129504694 1.10171436497186 0.8589004561254613 1.0 20.495610507852685 -7.747078005084455 24.87719748958133 0.9294502510155707 1.096087406933496 0.1859632430277518 0.14228453358923593 356.6579568516669 617820.531483356 0.10425250498043244 0.0389956585826439 1.7902842662105102e-08 7.747078005084455 0.16663715591792538 THYDPPRK ddPTM_KYSE-520_SHP099_60min_R1 3 THYDPPRK 8 1 P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;D6RBM0;E7EN40;E5RGV0;P55795 P31943;P55795 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 0 ;; 130.27 0.0016216999999999998 6375320000.0 2112700.0 1964150.0 1625420.0 1296400.0 2000250.0 2078540.0 1509830.0 1842960.0 1641330.0 1350540.0 False True 1995504.3194369653 1869789.2857507458 1730197.1739639528 1419609.466223127 2157658.2951343236 2065567.0608647352 1662458.3509208069 1836567.201910099 1343305.8465622235 1338575.266304222 1.4907673626351325 1.3968503175119875 1.2925662213533877 1.0605376492146301 1.6119065916192914 1.5431086415990056 1.24196105573564 1.3720313292362127 1.0035340412878409 1.0 20.352266831404066 -7.761974152822566 9.577276144163866 1.0007865686150053 1.3726628281101512 0.5027979686748942 0.14891154466026685 0.0811219601756035 119.44739959833703 0.12429773089424465 0.03957100835914116 1.7299193128623293e-08 7.761974152822566 0.3718762594951459 TIAPALVSK ddPTM_KYSE-520_SHP099_60min_R1 2 TIAPALVSK 9 0 P06733;K7EM90;A0A2R8YEM5;A0A2R8Y879;K7ERS8;A0A2R8Y6I8 P06733 ENO1 Alpha-enolase;Enolase 0 ; 105.52 0.012168 1370670000.0 2076410.0 2899400.0 1970350.0 1725580.0 2765000.0 2501300.0 2340200.0 2296700.0 2598100.0 2340300.0 False True 1961227.3980792877 2760108.4719118713 2097361.9136714684 1889578.6043854575 2982589.769302038 2485688.4588898784 2576770.254151042 2288733.2837538086 2126350.5327711804 2319566.7627258487 0.8455145286590255 1.1899241342242368 0.9042041588864399 0.8146256597352305 1.2858391563591103 1.0716175532575796 1.1108842804433616 0.9867072250441259 0.9167015870982694 1.0 21.14542394035234 -4.21170797285793 21.905259191911796 1.0317308912699783 0.845510314248412 0.14902633301899137 0.13308485869966316 17878.1970856707 7873822.023527621 0.03375206143194638 20.33736028726655 6.14174848168047e-05 4.21170797285793 -0.18622057702156625 TIAQDYGVLK ddPTM_KYSE-520_SHP099_60min_R1 2 TIAQDYGVLK 10 0 Q06830;A0A0A0MSI0 Q06830 PRDX1 Peroxiredoxin-1 0 ; 160.53 0.00057532 1555560000.0 1894560.0 2419100.0 1547050.0 1273280.0 2091000.0 2360300.0 1634000.0 1985690.0 1926880.0 2137000.0 False True 1789464.9800882752 2302882.804856872 1646775.3183675206 1394292.1483744085 2255549.8038374567 2345568.4921911675 1799180.6663032244 1978802.1048535309 1577007.1646919374 2118067.8425608417 0.8448572534507344 1.087256394050429 0.7774894105263849 0.6582849332572109 1.0649091396007377 1.1074095196852936 0.8494443049227035 0.934248688871584 0.7445498831544806 1.0 21.01431736949416 -3.96991789809168 18.186175311104517 0.9116081314083728 0.6096114703109375 0.019293780845257125 0.14661196604165477 80410772.6866257 1205963611.9736094 0.03772797216390106 772479037.2705203 0.00010717218914999823 3.96991789809168 -0.3019966610974353 TIAS(ph)DS(ph)EEEAGK ddPTM_KYSE-520_SHP099_60min_R1 1 TIASDSEEEAGK 12 0 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 TIAS(1)DS(1)EEEAGK 191.06 2.9544999999999998e-08 509230000.0 1300200.0 1177200.0 1035100.0 1174300.0 1199800.0 1287000.0 1249600.0 1433100.0 1410300.0 1237500.0 True False 1228075.3141155592 1120645.5449867751 1101824.2022185582 1285905.118933832 1294217.4340718198 1278967.3556115893 1375921.7629207533 1428128.9105880533 1154225.0707698674 1226536.712760431 1.0012544274778905 0.9136665322187232 0.8983214205947443 1.0484032850837275 1.055180346912786 1.0427469005254302 1.1217941938518234 1.1643588779123626 0.941044046021403 1.0 20.226158986688684 -5.340448467894758 5.747074297238163 1.0637071995190108 0.9356942210936849 0.4101003260970245 0.06279421021839625 0.1982445724970924 11.108162966626308 0.017782077055196303 0.02670710285917542 4.566164277495483e-06 5.340448467894758 -0.12801297842532589 TIAS(ph)DS(ph)EEEAGKELSDK ddPTM_KYSE-520_SHP099_60min_R1 3 TIASDSEEEAGKELSDK 17 1 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 T(0.016)IAS(0.984)DS(0.999)EEEAGKELS(0.001)DK;TIAS(1)DS(1)EEEAGKELSDK;T(0.001)IAS(0.999)DS(1)EEEAGKELSDK 195.13 1.2772e-12 2957600000.0 8553300.0 7632400.0 6925900.0 7325800.0 7781000.0 7839400.0 7533400.0 8083900.0 9040900.0 7439700.0 True False 8078831.3984191725 7265728.047534039 7372354.595831804 8022041.8294179095 8393320.43216607 7790471.39672222 8294949.590898844 8055858.837696452 7399300.462542223 7373790.045999022 1.095614514113092 0.9853451213296185 0.9998053307514503 1.0879129700432175 1.1382640921164062 1.0565084370620623 1.1249234842806026 1.0924990795022047 1.0034596071198205 1.0 22.813974908469735 -3.919605681027843 20.707393575093082 1.0602066847859613 2.73195646047115 0.04153792996942485 0.05310648734618165 2219.1953856898494 661191.5472544794 0.013536529851061246 27136.490729371733 0.00012033565299127645 3.919605681027843 1.6717497756851887 TIAS(ph)DS(ph)EEEAGKELSDKK ddPTM_KYSE-520_SHP099_60min_R1 9 TIASDSEEEAGKELSDKK 18 2 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 T(0.012)IAS(0.989)DS(1)EEEAGKELSDKK;T(0.004)IAS(0.996)DS(0.998)EEEAGKELS(0.003)DKK;T(0.012)IAS(0.988)DS(1)EEEAGKELSDKK;T(0.001)IAS(0.999)DS(0.975)EEEAGKELS(0.025)DKK;T(0.019)IAS(0.981)DS(0.984)EEEAGKELS(0.016)DKK;TIAS(1)DS(1)EEEAGKELSDKK;T(0.015)IAS(0.985)DS(1)EEEAGKELSDKK;TIAS(1)DS(0.998)EEEAGKELS(0.002)DKK;T(0.006)IAS(0.994)DS(1)EEEAGKELSDKK 130.71 1.3411e-05 13244940000.0 19608260.0 17612220.0 16814580.0 16615280.0 17528420.0 17472470.0 16441060.0 17392730.0 22126420.0 16258040.0 True False 18520550.72970279 16766102.514718825 17898474.731079217 18194391.2156339 18907806.9309328 17363417.83364635 18103082.7940828 17332398.67912372 18108819.889657397 16114006.414163701 1.1493448775981503 1.040467657998569 1.1107402014775807 1.1291041313997248 1.173377150595735 1.0775357404837853 1.123437730431258 1.0756107595867088 1.123793762036753 1.0 23.941811899115315 -10.080089692688635 4.66196983911594 0.9999943394618522 1.1100149825542949 0.45508331802522795 0.0365676544650242 2.125438148158693e-06 4.1945502711694797e-07 0.034979005133827734 0.00848321838964892 8.31592008787306e-11 10.080089692688635 0.11002064309244264 TIAS(ph)DS(ph)EEEAGKELSDKKNEEK ddPTM_KYSE-520_SHP099_60min_R1 4 TIASDSEEEAGKELSDKKNEEK 22 3 Q96ST2;Q96ST2-3;Q96ST2-2 Q96ST2 IWS1 Protein IWS1 homolog 2 T(0.01)IAS(0.989)DS(0.996)EEEAGKELS(0.005)DKKNEEK;T(0.008)IAS(0.992)DS(0.999)EEEAGKELS(0.001)DKKNEEK;T(0.001)IAS(0.999)DS(0.996)EEEAGKELS(0.004)DKKNEEK;T(0.006)IAS(0.994)DS(0.999)EEEAGKELS(0.001)DKKNEEK 89.197 0.0063605 5817130000.0 3295620.0 3475930.0 3272620.0 2808130.0 2978600.0 2637470.0 1988600.0 2217630.0 4646460.0 2516020.0 True False 3112805.388944408 3308941.1053227 3483578.3215771355 3075013.8309049294 3212998.8740842836 2621008.571410178 2189627.094865722 2209937.559128732 3802779.991724709 2493730.020233937 1.2482527634055571 1.3269043073926214 1.3969348298779916 1.233098132498105 1.2884309239630005 1.051039426940171 0.8780529877329355 0.8861976000599365 1.5249365251527789 1.0 21.249873851832135 -6.251850411707331 5.705893099767206 1.0482631870893988 1.3032553293488212 0.30269067241746894 0.17381612268977034 0.2031300917169551 25.928617547944036 0.059666271535208426 0.05676419587378951 5.599504374844707e-07 6.251850411707331 0.25499214225942235 TICTFDSSGFESMS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 1 TICTFDSSGFESMSPIK 17 0 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 TICTFDSSGFESMS(1)PIK 202.63 7.8691e-13 142770000.0 141180.0 133500.0 108480.0 84017.0 101400.0 124610.0 110590.0 140990.0 103760.0 110420.0 True False 133348.46396464726 127086.45961241459 115472.794374137 92001.9504193678 109379.60311292113 123832.2627682673 121769.51645439022 140500.93859731342 84919.7995767435 109441.76470545997 1.2184421945637232 1.1612245101716123 1.0551072041364493 0.840647541338283 0.9994320121508811 1.1314900038530666 1.112642114115282 1.2837963548508455 0.7759359491807146 1.0 16.739803872851564 -4.700748007414213 3.568846337116233 1.0336982907393786 1.2040530596087191 0.194133229971435 0.13595712787732808 0.40350871136669864 10.121644201810891 0.03654762396301454 0.10849790301989266 1.991828731247786e-05 4.700748007414213 0.17035476886934053 TICTFDSSGFESMS(ph)PIKETVSSR ddPTM_KYSE-520_SHP099_60min_R1 3 TICTFDSSGFESMSPIKETVSSR 23 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 TICTFDS(0.001)S(0.001)GFES(0.024)MS(0.969)PIKET(0.003)VSSR;TICTFDSSGFES(0.017)MS(0.983)PIKETVSSR;TICTFDSSGFES(0.158)MS(0.842)PIKETVSSR 215.82 4.601e-21 3902340000.0 2179610.0 1990070.0 1709660.0 1459300.0 1517230.0 1778440.0 1539400.0 1836200.0 2312480.0 1906490.0 True False 2058702.6883551874 1894464.050044033 1819867.4191527166 1597991.4332454582 1636627.369142183 1767340.0962811792 1695017.5750961946 1829830.6507723005 1892591.9248769062 1889599.9818267745 1.0894912723088261 1.00257412588063 0.9630966536067365 0.8456771002403359 0.8661237218895241 0.9352985358163476 0.8970245509091999 0.9683693206872854 1.0015833737716484 1.0 20.849649425296764 -4.515097748271592 1.9991201874669469 0.9253033415830576 1.096579865360221 0.4864197276443486 0.04983301287072963 0.3904068370345969 2.444392162565282 0.01452920535494648 0.10151978513755555 3.054233608150097e-05 4.515097748271592 0.1712765237771634 TIDDLEDKLK ddPTM_KYSE-520_SHP099_60min_R1 6 TIDDLEDKLK 10 1 J3KN67;P06753-7;P06753-5;P06753-2;A0A087WWU8 J3KN67;P06753-5 TPM3 Tropomyosin alpha-3 chain 0 ;;;;; 163.34 7.3811e-05 5124370000.0 5887380.0 5952840.0 4170590.0 3398950.0 5772230.0 5667780.0 3930490.0 4803320.0 4919440.0 4607950.0 False True 5560795.295198942 5666856.631004998 4439432.904579933 3721985.186068415 6226471.661503903 5632405.282663758 4327822.287085776 4786658.404023318 4026193.704990509 4567127.147930857 1.2175696263937534 1.2407923947491533 0.9720405762277111 0.8149510765765884 1.3633234766246467 1.233249064505578 0.9476027592195462 1.0480676909097921 0.8815593642525545 1.0 22.12285552394867 -6.779203945281839 24.976635168986782 0.9733130429411724 1.1325857432602093 0.2372059843569546 0.14978341792306937 437.3441242122754 614891.4133477103 0.06767205290884099 0.04573625811343921 1.662631692901449e-07 6.779203945281839 0.15927270031903695 TIDDLEEK ddPTM_KYSE-520_SHP099_60min_R1 2 TIDDLEEK 8 0 P67936;A0A2R8YE05;K7ENT6;P67936-2;A0A5F9UN72;K7EPB9 P67936 TPM4 Tropomyosin alpha-4 chain 0 ; 135.83 0.0054013 553930000.0 541100.0 587450.0 623990.0 340790.0 538680.0 628230.0 476950.0 518730.0 656350.0 589570.0 False True 511084.1043438921 559228.0202195735 664213.3938193005 373178.5791377501 581071.0513300623 624308.9835399133 525164.7605834287 516930.64670249156 537173.3852370441 584346.8684785189 0.8746245285349381 0.9570138053030932 1.1366765694299559 0.6386251031162469 0.9943940537287623 1.0683876601674018 0.8987209291474695 0.8846297885508295 0.9192714365624961 1.0 19.15646548203193 -4.251487590317419 21.338367465853008 0.9410810040083061 0.8746242280151139 0.02631023838290103 0.1256855368540763 894.9421676732645 1918577.2439075706 0.030973059153840014 0.35122418455475113 5.60418430727851e-05 4.251487590317419 -0.06645677599319222 TIDQIHK ddPTM_KYSE-520_SHP099_60min_R1 2 TIDQIHK 7 0 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;Q04637-6;Q04637-7;Q04637-4;Q04637-5;E9PGM1;E7EX73;H7C044 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 0 ; 103.92 0.0073098 352480000.0 827940.0 801470.0 557650.0 551420.0 814090.0 804810.0 572830.0 736670.0 689470.0 691830.0 False True 782012.5177425287 762966.1781690035 593597.0112715473 603826.7910095322 878154.2514615166 799786.8822608894 630737.2466820534 734114.6637100705 564279.6281242995 685700.9244355959 1.1404571437412125 1.1126806906334639 0.8656791760345667 0.8805978955133322 1.2806665707565292 1.1663785970818084 0.9198430747358503 1.070604745522728 0.8229238258483625 1.0 19.38721994162783 -6.783115428730234 24.973938622520677 0.9592266306681477 1.0672275168151548 0.16761707122219305 0.13132600486648865 552.0034042485958 635981.6984163505 0.05922250000359912 0.03996632878069015 1.647724393761049e-07 6.783115428730234 0.10800088614700709 TIEAAEALLHMES(ph)PTCLR ddPTM_KYSE-520_SHP099_60min_R1 7 TIEAAEALLHMESPTCLR 18 0 Q15723-2;Q15723-3;Q15723-1;Q15723;Q15723-4;D6RHI1 Q15723-2 ELF2 ETS-related transcription factor Elf-2 1 TIEAAEALLHMES(0.629)PT(0.371)CLR;TIEAAEALLHMES(0.971)PT(0.029)CLR;TIEAAEALLHMES(0.997)PT(0.003)CLR;TIEAAEALLHMES(0.921)PT(0.079)CLR;TIEAAEALLHMES(0.967)PT(0.033)CLR;TIEAAEALLHMES(0.998)PT(0.002)CLR;TIEAAEALLHMES(0.964)PT(0.036)CLR 237.14 1.0574000000000002e-23 1554400000.0 1202621.0 1212810.0 1076151.0 888892.0 979437.0 1274555.0 988597.0 1201117.0 1458527.0 1277962.0 True False 1135909.2157644725 1154544.787135075 1145521.4153624792 973372.0284248743 1056513.1196657785 1266600.029472827 1088534.0325369446 1196950.6054698138 1193695.2632736033 1266640.2509193919 0.8967891356207667 0.9115017356325505 0.9043778725103687 0.7684676274248757 0.8341066999086028 0.9999682455641721 0.8593868951715622 0.9449807114537898 0.9424106508593569 1.0 20.27257540010794 -6.24663210462243 24.85267265208262 0.9402879479953858 0.8627820243686751 0.3883661590314871 0.053550507042219635 940.1370193816206 1577935.9686894591 0.018580269352147877 0.018500614688147152 5.667191594586987e-07 6.24663210462243 -0.07750592362671072 TIEDAIAVLSVAEEAADRHPER ddPTM_KYSE-520_SHP099_60min_R1 3 TIEDAIAVLSVAEEAADRHPER 22 1 Q96CT7 Q96CT7 CCDC124 Coiled-coil domain-containing protein 124 0 ;; 125.09 7.6196e-05 97296000.0 76361.0 65407.0 57125.0 71087.0 85141.0 53116.0 52650.0 58328.0 59000.0 46296.0 False True 72125.10310812051 62264.74954209147 60807.368903231676 77843.08710691404 91841.11231397651 52784.48334162022 57972.37581448276 58125.67378185753 48287.087268965566 45885.85345774297 1.5718374547515326 1.3569487075015854 1.3251877064731983 1.6964506757752913 2.00151256636328 1.1503432836926595 1.2634041092396913 1.266744963900179 1.0523305905911489 1.0 15.485761820942523 -6.381978099934864 20.333795044086106 1.170477648185187 1.569447844531927 0.5691223881963527 0.19209006113161053 4.108926141414806 677.2605339549287 0.07313778286834037 0.06450128431951356 4.149749679513351e-07 6.381978099934864 0.39897019634674 TIEKFEK ddPTM_KYSE-520_SHP099_60min_R1 2 TIEKFEK 7 1 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A0A2U3TZH3;Q05639;A6PW80;Q5JR01;A0A2R8Y660;A0A2R8Y488;A0A2R8YDN5 Q5VTE0 EEF1A1P5;EEF1A1;EEF1A2 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha;Elongation factor 1-alpha 2 0 ; 73.665 0.025764 4043200000.0 5764500.0 6585100.0 5024900.0 3940900.0 5267800.0 5038600.0 3399500.0 3868600.0 6095000.0 4042100.0 False True 5444731.693754143 6268741.911563393 5348813.094124267 4315441.951125214 5682345.890318008 5007152.228426229 3743154.6359227723 3855180.729538026 4988301.6424465235 4006290.1387062157 1.3590457768274504 1.5647248937361808 1.3351037765456506 1.0771666059410354 1.4183560584938202 1.2498226676221784 0.9343194093105749 0.9622819606327891 1.2451174202918407 1.0 21.933835475376256 -5.724119905027293 0.5345280801201167 1.0205650009172902 1.502422996478278 0.49700051928577116 0.14340099125764444 1.0395562259956044 0.5857279252440176 0.11766890195447495 0.260136210581134 1.8874701626299724e-06 5.724119905027293 0.48185799556098785 TIETS(ph)PSLSR ddPTM_KYSE-520_SHP099_60min_R1 1 TIETSPSLSR 10 0 H3BP78;Q9NVI1-2;Q9NVI1-1;Q9NVI1;F8W7R3 H3BP78 FANCI Fanconi anemia group I protein 1 TIET(0.397)S(0.579)PS(0.023)LSR 229.0 8.3833e-10 669070000.0 1049700.0 997940.0 861030.0 702920.0 753010.0 977700.0 800210.0 832030.0 1017900.0 839010.0 True False 991471.0484749291 949997.4644615204 916533.3714967109 769725.3054593952 812267.6029591786 971597.8116405987 881103.0360970024 829143.8821272608 833075.0191708484 831577.0241399036 1.1922780688901344 1.1424046563144268 1.1021629324651885 0.9256211789347097 0.9767797562700862 1.168379817426435 1.0595567343967005 0.9970740629646913 1.001801390595771 1.0 19.665490372583392 -4.934456239378142 3.4072728491970468 1.023887268941263 1.1676619573150617 0.4881543256439579 0.06138862138443208 0.22145774715965486 5.1874814353412955 0.0180926173176608 0.041577807251315636 1.162903722250931e-05 4.934456239378142 0.1437746883737987 TIGGGDDS(ph)FNTFFSETGAGK ddPTM_KYSE-520_SHP099_60min_R1 11 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VRZ4;F8VS66;F8VWV9;F8VX09;F8VRK0;F8W0F6;F8VXZ7;P68363;P68363-2;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1A;TUBA1B;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain 1 TIGGGDDS(0.996)FNT(0.004)FFSETGAGK;TIGGGDDS(0.999)FNT(0.001)FFSETGAGK;TIGGGDDS(0.998)FNT(0.002)FFSETGAGK;T(0.002)IGGGDDS(0.96)FNT(0.036)FFS(0.002)ET(0.001)GAGK;TIGGGDDS(1)FNTFFSETGAGK;TIGGGDDS(1)FNTFFSETGAGK;TIGGGDDS(1)FNTFFSETGAGK;TIGGGDDS(1)FNTFFSETGAGK;TIGGGDDS(1)FNTFFSETGAGK;TIGGGDDS(1)FNTFFSETGAGK;TIGGGDDS(1)FNTFFSETGAGK 338.73 6.261199999999999e-65 14712220000.0 10978220.0 10189090.0 9643850.0 8605460.0 8808140.0 10446180.0 9146660.0 9915840.0 12200680.0 10443110.0 True False 10369236.252060995 9699590.8222641 10265508.001705572 9423320.331074113 9501290.506538909 10380981.515806265 10071293.655599179 9881444.265414465 9985344.06611394 10350592.170016639 1.0018012575259572 0.9371049175680648 0.9917797777254197 0.9104136436146498 0.9179465629089351 1.002936000693531 0.9730161801537766 0.9546742933258262 0.9647123470905614 1.0 23.30320997264218 -6.269799442822386 24.992972404139994 0.9758566811116695 0.9509131560916728 0.1656781061729068 0.030123914702750228 1338.027854960275 4000112.7674711244 0.010735459257444959 0.009640998210178152 5.372798549086496e-07 6.269799442822386 -0.024943525019996637 TIGGGDDSFNTFFSETGAGK ddPTM_KYSE-520_SHP099_60min_R1 2 TIGGGDDSFNTFFSETGAGK 20 0 Q9BQE3;F5H5D3;F8VQQ4;A0A1W2PQM2;F8VVB9;F8VRZ4;F8VS66;F8VWV9;F8VX09;F8VRK0;F8W0F6;F8VXZ7;P68363;P68363-2;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBA1A;TUBA1B;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-1B chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain 0 ; 268.59 1.4852e-34 182933000.0 148557.0 181530.0 190550.0 123105.0 191953.0 182573.0 157578.0 150068.0 198191.0 196930.0 False True 140316.24706896258 172809.0263179149 202833.15789077975 134804.86218713212 207058.6090368296 181433.49418498419 173507.52205307814 149547.44913413434 162204.51038853478 195185.3534092216 0.7188871737459646 0.8853585748086694 1.039182266230417 0.6906505013442429 1.0608306690037075 0.9295446149824288 0.8889372026255773 0.7661817166198748 0.8310280846148335 1.0 17.574485272436615 -4.266749261631929 6.068335132844346 0.895659133697112 0.7147140681059182 0.19185951432666204 0.11088820690852046 0.2086987755750562 38.641859720681495 0.027118331002600627 0.1563385946680442 5.4106661566453075e-05 4.266749261631929 -0.18094506559119383 TIHWIK ddPTM_KYSE-520_SHP099_60min_R1 2 TIHWIK 6 0 E9PQ57;P78406;B0QZ36;E9PPG9 E9PQ57 RAE1 mRNA export factor 0 ; 92.76 0.024669999999999997 512630000.0 1292710.0 1032790.0 721070.0 785960.0 1208240.0 1015110.0 818290.0 794810.0 846520.0 808800.0 False True 1221000.7993465033 983173.2181506039 767551.325952793 860657.4020925093 1303321.6140547914 1008774.3219540634 901010.7389408 792052.9896200479 692813.3070326227 801634.6612368777 1.5231387293839902 1.2264604634655172 0.9574827076071087 1.0736279800633406 1.6258299161413987 1.2583965872902512 1.1239667924919694 0.9880473336793524 0.8642506874186932 1.0 19.612585363850002 -7.100752214523876 2.394473121751103 0.9362671161100152 1.265582156788705 0.3866544778162425 0.18453498156499032 0.36548192160942145 4.059719434928507 0.11664703892544503 0.058627149155200446 7.929536188645173e-08 7.100752214523876 0.32931504067868966 TILETS(ph)FHQHR ddPTM_KYSE-520_SHP099_60min_R1 2 TILETSFHQHR 11 0 Q5M775-4;Q5M775;Q5M775-5;Q5M775-3;Q5M775-2 Q5M775-4 SPECC1 Cytospin-B 1 TILET(0.136)S(0.864)FHQHR;TILET(0.229)S(0.771)FHQHR 166.6 1.0524000000000001e-05 1035320000.0 371420.0 317990.0 320110.0 379130.0 353180.0 319410.0 337280.0 379570.0 421000.0 419220.0 True False 350816.5921925862 302713.2830872789 340744.8027941091 415162.4012104094 380973.25668068475 317416.44371087634 371375.5539355887 378253.3602623042 344557.01254634745 415506.036948225 0.8443116609550019 0.7285412392816789 0.8200718461199358 0.9991729705292864 0.9168898230187609 0.7639273933110836 0.8937909943817849 0.9103438376984093 0.8292467062019647 1.0 18.664509912712806 TIPWLEDR ddPTM_KYSE-520_SHP099_60min_R1 6 TIPWLEDR 8 0 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ;;;;; 180.93 0.00022214 2356340000.0 1413710.0 1316090.0 1025971.0 1070332.0 1570070.0 1445760.0 1276570.0 1282930.0 1173390.0 1351100.0 False True 1335288.688138985 1252863.0609086356 1092106.7322716422 1172056.0314729502 1693625.5765237065 1436736.475562559 1405618.1537225866 1278479.8152681133 960331.9547547726 1339130.3051398953 0.9971312597540619 0.9355796490452454 0.8155343270777169 0.8752367316117969 1.2647205204924237 1.0728877317226175 1.049650021605437 0.954709045386404 0.7171310746002789 1.0 20.352864919405775 -3.1280230682119328 20.35513771232391 0.9726683086341565 41.962152033612725 0.0 0.14275554308780014 0.0 0.0 0.03477948850249763 0.0 0.0007446924173850801 3.1280230682119328 40.98948372497857 TIPWLEDRVPQK ddPTM_KYSE-520_SHP099_60min_R1 3 TIPWLEDRVPQK 12 1 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ;; 200.44 3.8479e-08 1856715000.0 1290730.0 1143030.0 885610.0 745520.0 1344780.0 1039630.0 830440.0 837240.0 961920.0 866910.0 False True 1219130.6338935369 1088117.123076992 942697.8376261006 816373.9966512386 1450606.5352484593 1033141.2835388315 914388.9795133722 834335.8098532854 787259.5760298881 859229.8518457735 1.418864383348221 1.266386544577716 1.0971427908388234 0.9501229442826351 1.6882636609194932 1.2024038519139744 1.0641960094253096 0.9710274940529459 0.9162386226906795 1.0 19.71268459155171 -6.849174859558005 2.972546161281266 0.966074399575157 1.26900985966779 0.3751140885291181 0.1831896498332756 0.30923213648637393 5.489781977473581 0.08911845510527582 0.05743077347930529 1.4152238550486367e-07 6.849174859558005 0.30293546009263295 TIPWLENR ddPTM_KYSE-520_SHP099_60min_R1 2 TIPWLENR 8 0 P12814-3;P12814;P12814-2;P12814-4;H9KV75;A0A494C1A0;P35609;P35609-2;G3V2W4;F6THM6 P12814-3 ACTN1;ACTN2 Alpha-actinin-1;Alpha-actinin-2 0 ; 129.77 0.0061371 698970000.0 599600.0 603340.0 461790.0 438880.0 698610.0 565180.0 626700.0 661180.0 504530.0 532920.0 False True 566338.9927270337 574354.6407681974 491557.72229012416 480591.023245916 753586.6324528377 561652.501977124 690052.9520025894 658886.5209005715 412920.0701662913 528198.7434054866 1.0722081409653557 1.0873835804021932 0.9306302380063901 0.9098677898159573 1.426710384796061 1.0633355512282159 1.3064267202787547 1.2474215986439006 0.7817513300089426 1.0 19.010721343747896 TIQAPTQVPVVVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 TIQAPTQVPVVVSPR 15 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 TIQAPT(0.004)QVPVVVS(0.996)PR;TIQAPTQVPVVVS(1)PR;TIQAPTQVPVVVS(1)PR;TIQAPT(0.01)QVPVVVS(0.99)PR 166.6 4.0561999999999996e-08 2113598000.0 1707340.0 1785720.0 1287380.0 1213990.0 1186560.0 1565930.0 1202350.0 1584760.0 1771470.0 1726290.0 True False 1612630.4467020894 1699931.3307796328 1370366.5746808292 1329367.244600597 1279935.521397117 1556156.4500177593 1323895.2718051919 1579262.8374457648 1449815.703124652 1710996.4136332972 0.9425095423067966 0.9935329596453287 0.8009172688859463 0.7769550152227898 0.7480644092521367 0.9095030460720046 0.7737568946704588 0.9230076842137872 0.8473516902621505 1.0 20.706405305166182 -9.733867075260303 12.516408132746268 1.00000241735792 0.855074494398725 0.22903613277531576 0.0784551017315097 0.0 0.0 0.08055666279347594 0.019537860561456802 1.8455802104443952e-10 9.733867075260303 -0.1449279229591951 TIQEVLEEQS(ph)EDEDR ddPTM_KYSE-520_SHP099_60min_R1 7 TIQEVLEEQSEDEDR 15 0 M0R0Q7;P18858-2;P18858-3;P18858 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR;TIQEVLEEQS(1)EDEDR 394.01 4.957299999999999e-82 17055400000.0 10980230.0 9748320.0 8880400.0 9556410.0 9397990.0 10464370.0 10521210.0 10890840.0 11106660.0 10062570.0 True False 10371134.753354158 9279996.074673366 9452844.793142378 10464648.333160557 10137558.345751477 10399057.985269027 11584796.583914427 10853062.217981163 9089970.520114064 9973423.458360994 1.0398771090642653 0.9304724815322757 0.9478034130013601 1.0492533859462023 1.0164572263551974 1.0426768730601939 1.1615667009709263 1.0881982764787494 0.9114192892806223 1.0 23.24965737571556 -5.270003665265615 23.809990197534898 1.0465672697130717 0.9684931494695084 0.16545037154945064 0.06579496176098446 494.7373713897052 1375444.956459833 0.019029590599929768 0.02877228053283741 5.370272640633657e-06 5.270003665265615 -0.0780741202435633 TIQEVLEEQS(ph)EDEDREAK ddPTM_KYSE-520_SHP099_60min_R1 11 TIQEVLEEQSEDEDREAK 18 1 M0R0Q7;P18858-2;P18858-3;P18858 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 TIQEVLEEQS(1)EDEDREAK;T(0.002)IQEVLEEQS(0.998)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK;TIQEVLEEQS(1)EDEDREAK 313.01 8.743899999999999e-48 48965340000.0 11178970.0 10589200.0 10565160.0 9794310.0 10032740.0 10464480.0 8993210.0 10586810.0 12294440.0 10477420.0 True False 10558850.2493758 10080478.937286751 11246207.118453685 10725158.277633334 10822259.559518019 10399167.298718223 9902331.432071486 10550086.827090017 10062079.6136112 10384598.210109407 1.0167798537546457 0.9707143919611069 1.0829698839484712 1.032794727406246 1.0421452366816222 1.0014029515937009 0.953559418642848 1.0159359672499901 0.9689426023065356 1.0 23.307942062243274 -6.47532618107153 5.981069501697761 0.9847563241051865 1.0285975441835784 0.3285312262427146 0.03013624004939449 0.2604378529534887 22.91598257992914 0.011053717882091947 0.00952431430094191 3.3471395457643896e-07 6.47532618107153 0.04384122007839186 TIQEVLEEQS(ph)EDEDREAKR ddPTM_KYSE-520_SHP099_60min_R1 5 TIQEVLEEQSEDEDREAKR 19 2 M0R0Q7;P18858-2;P18858-3;P18858 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 T(0.001)IQEVLEEQS(0.999)EDEDREAKR;TIQEVLEEQS(1)EDEDREAKR;TIQEVLEEQS(1)EDEDREAKR;TIQEVLEEQS(1)EDEDREAKR;TIQEVLEEQS(1)EDEDREAKR 138.93 2.0102000000000003e-06 10200420000.0 2830350.0 2852100.0 3001620.0 2473840.0 2560460.0 2590670.0 2252323.0 2183013.0 3439910.0 2241930.0 True False 2673344.8433371554 2715080.834910624 3195109.227961807 2708953.00981288 2761953.63497544 2574500.667569754 2480009.7893941705 2175440.637422065 2815309.057074365 2222068.2443951475 1.2030885415334516 1.2218710391811913 1.4378987846214974 1.2191133268052545 1.2429652608294444 1.1586055802127444 1.1160817385558 0.9790161228888022 1.2669768645385144 1.0 21.08347169493441 -6.362605477281161 1.5881341642197166 1.0863949615613955 1.2783882721904087 0.43711408839793553 0.09460002605071467 0.3644367865331356 1.8323762177996037 0.04261503279115055 0.035823789473928364 4.3390486819102654e-07 6.362605477281161 0.19199331062901326 TIQFVDWCPTGFK ddPTM_KYSE-520_SHP099_60min_R1 2 TIQFVDWCPTGFK 13 0 Q9BQE3;F5H5D3;Q9NY65;C9J2C0;A0A1W2PQM2;Q9NY65-2;V9GZ17;Q71U36-2;Q71U36;P0DPH8;P0DPH7;P0DPH7-2;Q6PEY2 Q9BQE3;Q71U36-2 TUBA1C;TUBA8;TUBA1A;TUBA3E Tubulin alpha-1C chain;Tubulin alpha-8 chain;Tubulin alpha-1A chain;Tubulin alpha-3E chain 0 ; 234.92 7.3925e-15 352590000.0 836550.0 1120550.0 760350.0 611780.0 1006580.0 1143630.0 763670.0 725510.0 807340.0 834650.0 False True 790144.9038789184 1066717.0960201595 809363.3776030135 669923.3872616354 1085792.1193432342 1136492.1809619898 840869.2163009691 722993.3751453068 660747.4073851971 827255.650347875 0.9551399298954913 1.2894648656332381 0.9783715315364272 0.8098142176241665 1.3125230621110178 1.3738101159950684 1.0164562985424994 0.87396607667929 0.7987221448500734 1.0 19.65797371494987 -7.060404842758529 5.0718612861275405 0.8846079353658957 1.1215825541189628 0.26110209150473895 0.17188508612275852 0.30971408490061025 16.254373031797417 0.08732889769283456 0.050458611324904964 8.701520691508675e-08 7.060404842758529 0.23697461875306713 TIQPDLNGFIPGS(ph)AAK ddPTM_KYSE-520_SHP099_60min_R1 1 TIQPDLNGFIPGSAAK 16 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;H7C1V2;H7C225;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 1 TIQPDLNGFIPGS(1)AAK 155.28 3.1004e-06 111100000.0 203130.0 167300.0 134640.0 164270.0 158280.0 192710.0 135500.0 157290.0 174520.0 171190.0 True False 191861.97397038422 159262.6568775803 143319.10983161698 179882.1714104237 170735.73550999156 191507.2254078551 149197.66235256233 156744.39770176198 142831.56729118415 169673.38978380465 1.130772328028879 0.9386425124205419 0.8446764104508792 1.0601672521520724 1.0062611216027482 1.1286815549089388 0.8793226948708209 0.9238007085346935 0.841802992638846 1.0 17.37240079631675 -6.816863284754474 24.99999277154848 0.9048814337474765 1.0080628805859355 0.2551971581496001 0.08824775970070783 137.1384446398909 61857.36351456465 0.03777616789136225 0.025468701770841054 1.5245325988205597e-07 6.816863284754474 0.10318144683845898 TIS(ph)AQDTLAYATALLNEK ddPTM_KYSE-520_SHP099_60min_R1 10 TISAQDTLAYATALLNEK 18 0 Q9UPU5;A0A0U1RQI9 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 T(0.016)IS(0.984)AQDTLAYATALLNEK;T(0.093)IS(0.899)AQDT(0.008)LAYATALLNEK;T(0.04)IS(0.96)AQDTLAYATALLNEK;T(0.005)IS(0.995)AQDTLAYATALLNEK;TIS(1)AQDTLAYATALLNEK;TIS(1)AQDTLAYATALLNEK;T(0.009)IS(0.991)AQDTLAYATALLNEK;T(0.12)IS(0.88)AQDTLAYATALLNEK;T(0.144)IS(0.856)AQDTLAYATALLNEK;T(0.021)IS(0.979)AQDTLAYATALLNEK 420.86 4.931699999999999e-102 7237514000.0 1953317.0 2397649.0 1876252.0 1655597.0 1655002.0 2271222.0 1631617.0 2067457.0 2563063.0 2029441.0 True False 1844962.6121690955 2282462.343095478 1997198.2060293448 1812944.4411066102 1785241.2417267298 2257046.4610309787 1796556.7694073855 2060285.4742150907 2097675.368760284 2011461.7316212063 0.917224813758741 1.134728196521964 0.9929088754870989 0.901306951360892 0.8875342809966629 1.1220926680080734 0.8931598057097458 1.0242727673245533 1.0428611868591657 1.0 20.939812860046608 -7.461319643250467 24.999953758614545 1.0254787871040705 0.9822453719138421 0.052032354737841846 0.08459221865851087 784.8245925592366 318727.5901428039 0.04650796151900301 0.02234167864178721 3.456848581187445e-08 7.461319643250467 -0.043233415190228386 TIS(ph)DGTISASK ddPTM_KYSE-520_SHP099_60min_R1 10 TISDGTISASK 11 0 A0A075B6Q2;S4R347;Q5T0N5-3;Q5T0N5-4;Q5T0N5-2;Q5T0N5-5;Q5T0N5 A0A075B6Q2 FNBP1L Formin-binding protein 1-like 1 TIS(0.999)DGT(0.001)ISASK;TIS(0.998)DGT(0.002)ISASK;TIS(1)DGTISASK;TIS(0.997)DGT(0.003)ISASK;TIS(0.999)DGT(0.001)ISASK;TIS(0.998)DGT(0.002)ISASK;T(0.004)IS(0.996)DGTISASK;TIS(0.999)DGT(0.001)ISASK;TIS(0.999)DGT(0.001)ISASK;T(0.002)IS(0.998)DGTISASK 283.47 3.0879e-28 31435400000.0 55195400.0 48842000.0 45008100.0 38149500.0 41135700.0 46855000.0 42798200.0 47123500.0 57890200.0 46629400.0 True False 52133601.13269792 46495557.0066634 47909394.14150613 41775217.009934574 44372845.55988347 46562560.56502027 47124659.72618031 46960039.5772076 47378798.97318429 46216299.79312426 1.1280349436467434 1.006042396617409 1.0366341389501232 0.9039065696936128 0.9601124659158662 1.0074921785916648 1.0196545361078688 1.0160925861095005 1.0251534455433184 1.0 25.46189842242031 -4.030563164800081 1.809094124242737 0.9931557995343341 1.24750222188532 0.5343184924427203 0.036664551422372675 1.5557135527343589 3.0970369348386555 0.010749342884034504 0.8195420038600767 9.320449017037019e-05 4.030563164800081 0.2543464223509859 TIS(ph)NPEVVMK ddPTM_KYSE-520_SHP099_60min_R1 8 TISNPEVVMK 10 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6;F8W9I4;E9PFY5 A8MQ02 MLLT4 Afadin 1 T(0.005)IS(0.995)NPEVVMK;TIS(1)NPEVVMK;TIS(1)NPEVVMK;TIS(1)NPEVVMK;T(0.002)IS(0.998)NPEVVMK;T(0.003)IS(0.997)NPEVVMK;T(0.001)IS(0.999)NPEVVMK;TIS(1)NPEVVMK 192.14 2.8922000000000004e-06 16042060000.0 25576500.0 27042500.0 20160900.0 16767360.0 20793580.0 24149830.0 18912290.0 24043920.0 28378800.0 27167200.0 True False 24157720.559511304 25743337.708379976 21460503.872580558 18360924.853109397 22429916.446713753 23999101.95304542 20824128.83936343 23960517.253413137 23225925.29133087 26926519.74376177 0.897172036691005 0.9560588577119808 0.7970025119028775 0.6818900113284482 0.8330046608385113 0.8912812417432979 0.7733687471507669 0.889848278998782 0.8625669233288776 1.0 24.682524437575776 -8.401412375335358 1.0565070612212009 0.9998032556120177 0.8336044396974798 0.30716971808856086 0.07255378763083023 1.8850970375497336 3.3984264265203548 0.07596174329539927 0.024036262903026753 3.968145834540022e-09 8.401412375335358 -0.1661988159145379 TIS(ph)PMVMDAK ddPTM_KYSE-520_SHP099_60min_R1 2 TISPMVMDAK 10 0 P18206-2;P18206 P18206-2 VCL Vinculin 1 T(0.001)IS(0.999)PMVMDAK;T(0.003)IS(0.997)PMVMDAK 110.31 0.0013515 0.0 358240.0 396110.0 299310.0 293940.0 330790.0 381930.0 333990.0 467980.0 438970.0 423610.0 True False 338367.7130662646 377080.2810267688 318604.00151293253 321875.96922371676 356821.2910623586 379546.2332002604 367752.9686282832 466356.6866073526 359264.1135331832 419857.1449635929 0.8059115275878073 0.8981156699368938 0.7588390607013719 0.7666321106709465 0.8498635675077048 0.9039889823315309 0.8759002271121816 1.1107508641964206 0.8556817904440713 1.0 18.67953901349391 -6.64856245549059 1.446810105607365 0.9834512422427635 0.8130138948947597 0.48666459306784904 0.0727217470033816 0.34048863859145445 1.4538305641045175 0.03925196481173778 0.025686493698950208 2.2461437368964796e-07 6.64856245549059 -0.17043734734800375 TIS(ph)PPTLGTLR ddPTM_KYSE-520_SHP099_60min_R1 1 TISPPTLGTLR 11 0 Q9UQ84;Q9UQ84-4 Q9UQ84 EXO1 Exonuclease 1 1 TIS(0.996)PPT(0.004)LGTLR 97.779 0.0019282 535780000.0 583620.0 648240.0 541420.0 423780.0 463920.0 558540.0 461250.0 611750.0 689520.0 681200.0 True False 551245.4351823734 617097.5773719224 576320.7995026294 464055.92378589744 500427.8646562756 555053.9446801065 507877.65136619465 609627.9820335237 564320.5493846982 675165.0979655809 0.8164602063160487 0.9139950794722231 0.8535998102378355 0.6873221456266012 0.7411933261422629 0.8221010629142481 0.7522273483871431 0.9029317182870756 0.8358260092014806 1.0 19.36488080162553 -8.236785654072937 0.9923190249999714 0.9980501322704193 0.8016590102462788 0.4414290389728909 0.06529910377634153 0.9026556831959727 1.7534464622820018 0.06801993583213864 0.022311785497514107 5.7971474389078285e-09 8.236785654072937 -0.19639112202414044 TIS(ph)PSTS(ph)NNIPLMR ddPTM_KYSE-520_SHP099_60min_R1 1 TISPSTSNNIPLMR 14 0 F8WBA3;Q15139;O94806;O94806-2 F8WBA3;O94806 PRKD1;PRKD3 Serine/threonine-protein kinase;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase D3 2 T(0.029)IS(0.971)PS(0.281)T(0.17)S(0.55)NNIPLMR 82.529 0.006681 90958000.0 391950.0 364270.0 319620.0 315040.0 341380.0 340290.0 351000.0 349400.0 406860.0 384250.0 True False 370207.75216704566 346769.9224195831 340223.21661008167 344981.30687977024 368244.6638135011 338166.1238858336 386482.5054298845 348188.0129505733 332984.4801059548 380845.84394197643 0.9720671974129471 0.9105256836475155 0.8933357735732996 0.9058292544537513 0.966912648965666 0.8879343946243896 1.0148003754736177 0.9142492126121804 0.8743287747592868 1.0 18.538847626525122 -5.730954393684317 24.9979305103516 0.9395830508553289 0.9177953744822159 0.0500730725738564 0.04621905556817785 746.6680131615462 612270.4025272845 0.013485732701102222 0.017407647826888462 1.8579995578822452e-06 5.730954393684317 -0.021787676373112963 TIS(ph)PSTSNNIPLMR ddPTM_KYSE-520_SHP099_60min_R1 1 TISPSTSNNIPLMR 14 0 F8WBA3;Q15139;O94806;O94806-2 F8WBA3;O94806 PRKD1;PRKD3 Serine/threonine-protein kinase;Serine/threonine-protein kinase D1;Serine/threonine-protein kinase D3 1 TIS(1)PSTSNNIPLMR 333.59 7.0941e-54 2359500000.0 960530.0 1086200.0 742250.0 537480.0 645230.0 818450.0 769740.0 902480.0 1105600.0 898480.0 True False 907247.4861309165 1034017.3215805613 790096.6226419897 588561.9376007452 696005.9301434908 813341.749961388 847552.8311384609 899349.5075204159 904850.9099079375 890520.1662068629 1.018783763196855 1.1611385803703012 0.887230466669134 0.6609192693610776 0.7815723400269551 0.9133333312661368 0.9517502952780735 1.0099148134411837 1.0160925538184227 1.0 19.764288756574725 -8.83451976914907 11.975264572306935 0.9999987321762506 0.9284725099024337 0.02142161705681478 0.13123875049157527 0.0 0.0 0.14410434051616167 0.03495043629753584 1.4637949038734493e-09 8.83451976914907 -0.07152622227381689 TIS(ph)QEFLTPGK ddPTM_KYSE-520_SHP099_60min_R1 12 TISQEFLTPGK 11 0 Q0ZGT2-4;Q0ZGT2-2;Q0ZGT2;E7ETM8;E7EUA0;H7BXY5;Q0ZGT2-3 Q0ZGT2-4 NEXN Nexilin 1 T(0.003)IS(0.997)QEFLTPGK;T(0.008)IS(0.992)QEFLTPGK;T(0.021)IS(0.979)QEFLTPGK;T(0.02)IS(0.973)QEFLT(0.007)PGK;TIS(0.999)QEFLT(0.001)PGK;TIS(1)QEFLTPGK;TIS(1)QEFLTPGK;TIS(1)QEFLTPGK;T(0.006)IS(0.994)QEFLTPGK;TIS(1)QEFLTPGK;TIS(1)QEFLTPGK;T(0.001)IS(0.999)QEFLTPGK 228.95 2.1159999999999997e-10 14188928000.0 13744520.0 14737780.0 10923500.0 9644970.0 10452840.0 14946890.0 11345470.0 14054820.0 14375740.0 15198540.0 True False 12982084.07657866 14029754.926941236 11627646.288217964 10561625.048934039 11275419.039475977 14853600.915242689 12492380.82871681 14006067.109839635 11765467.998914568 15063892.759885196 0.8618014137188799 0.9313498941191453 0.7718885465768929 0.7011218957333132 0.7485063269636493 0.9860400065245745 0.8292930006766736 0.9297774043597464 0.781037689689729 1.0 23.84459129874176 -6.247412979515493 24.982747609297256 0.8960946746528492 0.8026869230723415 0.26346051754371924 0.08483501803133625 1299.3709869857732 2314341.2470099563 0.029306638895179114 0.02916890028906209 5.657010964336809e-07 6.247412979515493 -0.09340775158050774 TIS(ph)QSSSLK ddPTM_KYSE-520_SHP099_60min_R1 10 TISQSSSLK 9 0 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 TIS(0.995)QS(0.002)S(0.003)SLK;TIS(0.999)QS(0.001)SSLK;TIS(0.998)QS(0.001)S(0.001)SLK;TIS(0.999)QS(0.001)SSLK;TIS(1)QSSSLK;TIS(0.99)QS(0.002)S(0.007)SLK;TIS(0.997)QS(0.001)S(0.002)SLK;TIS(1)QSSSLK;TIS(0.999)QSSSLK;TIS(1)QSSSLK 227.36 1.9603e-09 22368430000.0 12230580.0 14587690.0 12323160.0 10422670.0 10683620.0 13605110.0 11551950.0 14229920.0 16349490.0 14802340.0 True False 11552125.34634323 13886875.475830888 13117530.611353146 11413237.42310999 11524360.112517409 13520195.461930685 12719733.842167398 14180559.728808297 13380834.753103059 14671202.783646263 0.7874013819248812 0.9465396723512233 0.894100559088109 0.777934678663983 0.7855088831137563 0.9215464922208978 0.8669864379726158 0.9665574075913613 0.9120475635452633 1.0 23.806483815991047 -7.265406222050842 1.0388666374387487 0.9768442179446228 0.8480754632143235 0.4242331929699835 0.05729655249161706 0.5764360366777245 1.1032678277390697 0.05276062203764799 0.021031637937453728 5.427424339774891e-08 7.265406222050842 -0.12876875473029936 TISINS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 TISINSPK 8 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 TIS(0.025)INS(0.975)PK;TISINS(1)PK;TISINS(1)PK;TISINS(1)PK 158.08 0.00025183 16758900000.0 33611600.0 31323700.0 26823200.0 23386200.0 26698200.0 28649500.0 24861700.0 26478500.0 32329900.0 27314800.0 True False 31747097.544936527 29818862.43416777 28552266.39063743 25608817.416682567 28799196.448021594 28470687.84350755 27374963.262809586 26386652.263628367 26459605.130456436 27072812.12259281 1.17265607285927 1.1014320307450929 1.0546472328528438 0.9459238035826907 1.063768193625814 1.0516339312881422 1.0111606854451822 0.9746550208431496 0.977349711978216 1.0 24.690341415990655 -4.6253310972749 1.8202677732517414 1.0069710989328806 1.175996758160573 0.7153104254163966 0.03439087613171175 0.2592101970719228 1.4307866198600154 0.010338814534873448 0.0591838034496419 2.369566507580113e-05 4.6253310972749 0.16902565922769242 TISQIKSES(ph)EMETDSGVPQNTGMK ddPTM_KYSE-520_SHP099_60min_R1 1 TISQIKSESEMETDSGVPQNTGMK 24 1 Q4G0J3;Q4G0J3-3;H0YA82;D6R9Z6;Q4G0J3-2 Q4G0J3 LARP7 La-related protein 7 1 T(0.007)IS(0.029)QIKS(0.157)ES(0.582)EMET(0.199)DS(0.026)GVPQNTGMK 47.371 0.063717 642580000.0 301170.0 416950.0 313260.0 278000.0 326990.0 386120.0 297420.0 387020.0 547860.0 371470.0 True False 284463.4997324892 396919.09614529053 333453.24083372153 304421.0364162521 352722.25268140086 383710.08185605827 327486.1161394768 385677.5179511474 448382.4344267031 368179.06479928695 0.7726226907756546 1.0780599281539032 0.9056822419153674 0.8268287513365471 0.9580182210351575 1.0421833247505208 0.8894751153708484 1.0475270183039869 1.2178379416307634 1.0 18.4900480697044 -7.455851188929652 4.833034757968697 1.1168522061556205 0.9328006638694379 0.3731852574342933 0.09866185570730875 0.21081638461273064 9.511937477240991 0.05694732157117887 0.0251687130968219 3.500650963388453e-08 7.455851188929652 -0.1840515422861826 TITLVKS(ph)PISVPGGSALISNLGK ddPTM_KYSE-520_SHP099_60min_R1 2 TITLVKSPISVPGGSALISNLGK 23 1 P51610-2;P51610;A6NEM2;P51610-4 P51610-2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 T(0.052)IT(0.167)LVKS(0.775)PIS(0.005)VPGGSALISNLGK;TITLVKS(1)PISVPGGSALISNLGK 140.13 8.3061e-08 131475000.0 447130.0 701820.0 674700.0 357700.0 476200.0 647710.0 346220.0 443570.0 781840.0 361830.0 True False 422326.80756844336 668103.5137467026 718192.2415581689 391695.70045357355 513674.2307926327 643667.4016341747 381219.29638158006 442031.35920001677 639877.5645825088 358624.46769948 1.177629653318425 1.8629613256242172 2.0026303452334417 1.0922168890657136 1.4323457462001203 1.7948228846826897 1.063004147003807 1.2325744588359488 1.7842551811571126 1.0 18.452114396063333 -12.354447956698245 0.13478589490329534 2.3019476621378667e-12 1.7121748762993643 0.15284253722934282 0.3329144159652838 155.05133134726944 1.9994131486305131 47.24853727648909 2.5719811180738352 4.4213209621665713e-13 12.354447956698245 1.7121748762970623 TIVLVPS(ph)PLGQQQDMIFEAR ddPTM_KYSE-520_SHP099_60min_R1 3 TIVLVPSPLGQQQDMIFEAR 20 0 Q96R06;F5GZT2 Q96R06 SPAG5 Sperm-associated antigen 5 1 TIVLVPS(1)PLGQQQDMIFEAR;TIVLVPS(1)PLGQQQDMIFEAR;TIVLVPS(1)PLGQQQDMIFEAR 135.18 3.0026e-06 491031000.0 256641.0 374848.0 261290.0 243796.0 265072.0 358329.0 219148.0 334102.0 386308.0 380759.0 True False 242404.61212885004 356839.73942168074 278133.17147878185 266966.2985400598 285931.6583466291 356092.5357956064 241301.61851837166 332943.078141993 316164.2052321961 377385.7714860195 0.6423257855598037 0.9455569509591332 0.7369996234452244 0.7074095493553862 0.7576641197168761 0.9435770044891533 0.6394030637885637 0.8822353763656061 0.8377745774231147 1.0 18.525680504705523 -8.201560512866525 0.9969884334083429 0.999437592779902 0.7769466116940259 0.3022418177466354 0.10369866803925173 1.0218052511735907 2.0663990724211616 0.09504418044233824 0.03123157404491955 6.286942482577497e-09 8.201560512866525 -0.22249098108587606 TIVMGAS(ph)FR ddPTM_KYSE-520_SHP099_60min_R1 2 TIVMGASFR 9 0 P37837;F2Z393 P37837 TALDO1 Transaldolase 1 TIVMGAS(1)FR;TIVMGAS(1)FR 122.51 0.00071935 814100000.0 695210.0 669250.0 636010.0 502000.0 526350.0 487740.0 493660.0 506530.0 566840.0 549920.0 True False 656645.3154332235 637098.2254352703 677008.2222519793 549709.9290681964 567770.7504781653 484695.83374203276 543563.9704573133 504772.9656549912 463916.14487356663 545048.1366312854 1.204747381564633 1.1688843289565358 1.2421072135688491 1.0085529921553784 1.0416891872841156 0.8892716095457825 0.9972769998203368 0.9261071302340043 0.8511471073744757 1.0 19.05602412343192 -5.529886914882838 1.4912963459149726 0.9353152735707765 1.2084210385775354 0.7994010502052886 0.05663197649767763 0.1655965972427575 0.7468545996521938 0.019105753331815897 0.03278487237818269 2.951977786502001e-06 5.529886914882838 0.27310576500675887 TKCPEILS(ph)DES(ph)S(ph)S(ph)DEDEKK ddPTM_KYSE-520_SHP099_60min_R1 1 TKCPEILSDESSSDEDEKK 19 2 A0A494C198;B4DFG0;H0Y993;A0A494C028;P35659;P35659-2;H0Y8X0 A0A494C198 DEK Protein DEK 4 TKCPEILS(1)DES(1)S(1)S(1)DEDEKK 88.79 0.00021544 0.0 644370.0 523140.0 490590.0 539400.0 506510.0 530070.0 523210.0 575510.0 625290.0 535920.0 True False 608625.5115802512 498007.56915085134 522214.21637175395 590664.4138234761 546369.4553523237 526761.6365105174 576101.1728375214 573513.6901350442 511753.0982781607 531172.1657394504 1.1458158970603762 0.937563376382062 0.983135506817783 1.1120018177180009 1.0286108546213393 0.9916966107913562 1.0845846412820312 1.0797133719095573 0.9634411049489835 1.0 19.018820023603254 TKDDEGAT(ph)PIKR ddPTM_KYSE-520_SHP099_60min_R1 1 TKDDEGATPIKR 12 2 H7C150;H7C183;Q70CQ2-3;Q70CQ2-2;Q70CQ2 H7C150 USP34 Ubiquitin carboxyl-terminal hydrolase 34 1 TKDDEGAT(1)PIKR 89.484 0.0022443000000000003 353250000.0 386530.0 327150.0 306210.0 323530.0 364160.0 348990.0 360200.0 308880.0 336740.0 382840.0 True False 365088.41037154774 311433.22293783876 325948.78655332275 354278.19392715895 392817.32021303056 346811.8239587324 396612.5312132322 307808.5673731337 275596.5045246012 379448.3354450132 0.9621557831934504 0.8207526396777918 0.8590070270595687 0.9336664858778865 1.0352326878765679 0.913989577927638 1.045234605517742 0.8112002046659103 0.72630837661044 1.0 18.533543940390196 -11.178756675752574 2.456297060200009 1.2634780918653656 0.9041683957579303 0.08799916763510607 0.09522692134576 22134945.254668634 8565600.959471295 32090527.604437392 0.02574730616647082 6.625876308678107e-12 11.178756675752574 -0.35930969610743535 TKDEPLKT(ph)PDGK ddPTM_KYSE-520_SHP099_60min_R1 1 TKDEPLKTPDGK 12 2 Q6UB98-2;Q6UB98 Q6UB98-2 ANKRD12 Ankyrin repeat domain-containing protein 12 1 TKDEPLKT(1)PDGK 85.734 0.0077166 527730000.0 684230.0 588710.0 556450.0 652030.0 649480.0 620070.0 576810.0 725710.0 768990.0 692710.0 True False 646274.3979213116 560427.4879282748 592319.6573514794 713998.7351600316 700590.3809642992 616199.913126712 635119.5839231117 723192.6813919867 629360.8006603697 686573.1283202252 0.9413045329963484 0.8162677285366831 0.8627189630923264 1.039945645567146 1.02041625584498 0.8975007726188049 0.9250574450488616 1.0533367117955157 0.9166697248990335 1.0 19.38905386741826 -5.240546474304196 24.311180668539123 0.9772954514520212 0.8677141121930464 0.41409729400739803 0.05739419358168313 556.2642710415645 647272.534269251 0.01573452220825674 0.027210651531036082 5.7471631456420665e-06 5.240546474304196 -0.10958133925897484 TKDIEDVFYK ddPTM_KYSE-520_SHP099_60min_R1 2 TKDIEDVFYK 10 1 J3KTL2;Q07955;Q07955-3;Q07955-2;J3QQV5;J3KSW7 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 0 ; 163.78 7.2294e-05 3150900000.0 9972700.0 8732500.0 6179300.0 5167200.0 9172000.0 8979000.0 6273200.0 6581200.0 7854000.0 7469300.0 False True 9419494.450915428 8312977.592250264 6577627.565229574 5658289.1344246715 9893784.218458705 8922958.730409065 6907356.27653206 6558371.35326362 6427911.583228064 7403127.813027466 1.2723668547691034 1.1229007255043892 0.8884930439340466 0.7643106099651071 1.3364329872906382 1.2052957825079171 0.9330321522177444 0.8858919525504738 0.8682697024245225 1.0 22.819703505869867 -6.899584399342921 8.046145018335329 0.908236947322019 1.0852556432169196 0.21655788731592773 0.16315832239722278 0.4345314739563736 30.842389695625737 0.07481847708374752 0.05036684794716018 1.2601307244900311e-07 6.899584399342921 0.1770186958949006 TKDQPDGSSLS(ph)PAQS(ph)PSQSQPPAASSLR ddPTM_KYSE-520_SHP099_60min_R1 7 TKDQPDGSSLSPAQSPSQSQPPAASSLR 28 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 2 TKDQPDGS(0.002)S(0.007)LS(0.991)PAQS(0.994)PS(0.005)QSQPPAASSLR;TKDQPDGS(0.004)S(0.015)LS(0.98)PAQS(0.953)PS(0.045)QS(0.002)QPPAASSLR;TKDQPDGS(0.013)S(0.05)LS(0.937)PAQS(0.997)PS(0.002)QSQPPAASSLR;TKDQPDGS(0.003)S(0.014)LS(0.984)PAQS(0.985)PS(0.014)QS(0.001)QPPAASSLR;TKDQPDGS(0.004)S(0.018)LS(0.978)PAQS(1)PSQSQPPAASSLR;TKDQPDGS(0.007)S(0.006)LS(0.987)PAQS(0.996)PS(0.003)QS(0.001)QPPAASSLR;TKDQPDGS(0.008)S(0.006)LS(0.986)PAQS(1)PSQSQPPAASSLR 238.11 4.6222e-31 6984730000.0 2767830.0 2367754.0 2062923.0 2300398.0 2334774.0 2492420.0 2432080.0 2430067.0 2789230.0 2469491.0 True False 2614292.9523676867 2254003.54376879 2195902.3173735035 2519027.1342801196 2518507.4307531295 2476863.8822637415 2677938.3812134312 2421637.6647589034 2282776.1427663863 2447613.2309749266 1.0680988806905447 0.9208985779468848 0.8971606663928834 1.0291769559019532 1.0289646251625975 1.0119506835960206 1.0941019387065343 0.9893873893606644 0.9326539478858419 1.0 21.222944172355323 -3.8284901617251834 8.000077062133403 0.9926861887300854 2.8445871671735534 0.14916783624487173 0.05590308326749886 16898.994666160557 20357.099207394127 0.015200863521528196 538727.7192770226 0.00014842595033043405 3.8284901617251834 1.8519009784434681 TKDQPDGSSLS(ph)PAQS(ph)PSQSQPPAASSLREPGLESK ddPTM_KYSE-520_SHP099_60min_R1 1 TKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESK 35 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 2 T(0.008)KDQPDGS(0.034)S(0.137)LS(0.813)PAQS(0.664)PS(0.267)QS(0.033)QPPAAS(0.018)S(0.018)LREPGLES(0.007)K 41.81100000000001 0.052648 373690000.0 243340.0 268860.0 262140.0 207700.0 209560.0 243110.0 182340.0 188050.0 368790.0 217010.0 True False 229841.44511373652 255943.5620329122 279037.96383883 227439.74555271823 226051.1797667032 241592.6603129246 200772.70666690922 187397.69844119993 301827.0324393527 215087.460231225 1.0685952815038615 1.1899511099241478 1.2973232541723094 1.057429128170532 1.0509733088283801 1.123229871482074 0.9334468241480604 0.8712627795211407 1.4032758214490062 1.0 17.71456389138943 -5.3727284838047975 10.737226076305081 1.0538088452003935 1.185684425361827 0.13181143509194204 0.14277759568409484 0.8921942377521127 80.55190516873283 0.03966534631005662 0.05884364112252985 4.239079058427808e-06 5.3727284838047975 0.13187558016143353 TKDQPDGSSLS(ph)PAQSPSQSQPPAASSLR ddPTM_KYSE-520_SHP099_60min_R1 4 TKDQPDGSSLSPAQSPSQSQPPAASSLR 28 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 T(0.004)KDQPDGS(0.089)S(0.071)LS(0.836)PAQSPSQSQPPAASSLR;TKDQPDGSS(0.001)LS(0.998)PAQSPSQSQPPAASSLR;TKDQPDGSS(0.001)LS(0.999)PAQSPSQSQPPAASSLR;T(0.001)KDQPDGS(0.062)S(0.05)LS(0.887)PAQSPSQSQPPAASSLR 225.51 6.929899999999999e-23 4441670000.0 876030.0 890400.0 632020.0 613060.0 584930.0 827830.0 767900.0 762470.0 911950.0 894470.0 True False 827434.86957749 847623.8474823522 672761.0204677543 671325.0380767896 630960.6632035596 822663.2059020536 845526.8259817903 759825.1695318359 746362.8683886972 886545.6916871299 0.9333245622150058 0.9560971932188763 0.7588565674347418 0.7572368174270101 0.7117068743550236 0.9279422522898899 0.953731808647923 0.8570626157867396 0.8418774975583497 1.0 19.757835462550847 TKDQPDGSSLS(ph)PAQSPSQSQPPAASSLREPGLESK ddPTM_KYSE-520_SHP099_60min_R1 2 TKDQPDGSSLSPAQSPSQSQPPAASSLREPGLESK 35 2 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 T(0.001)KDQPDGS(0.094)S(0.094)LS(0.782)PAQS(0.028)PSQSQPPAASSLREPGLESK;TKDQPDGS(0.002)S(0.001)LS(0.997)PAQSPSQSQPPAASSLREPGLESK 142.78 7.893699999999999e-07 2438200000.0 313810.0 371180.0 292480.0 218282.0 228250.0 298370.0 222340.0 303130.0 390480.0 272100.0 True False 296402.3337352745 353347.95564746164 311333.7287845461 239027.45565112366 246211.9764351501 296507.762155268 244816.29702928953 302078.5127810737 319578.6751997575 269689.4056905968 1.099050713454144 1.3102033234959283 1.1544158658635855 0.8863064347635136 0.9129464162845857 1.0994416387844272 0.9077712800856437 1.1200978103219803 1.1849878729251848 1.0 18.040939323196667 -5.017018135110043 22.582582331339523 1.015985866547746 1.2115476909762999 0.3705831501082796 0.1039971983754533 201.06707801743778 266814.14253697987 0.028784382787090092 0.0516372735699974 9.615721245684201e-06 5.017018135110043 0.19556182442855397 TKDS(ph)GSISLQETR ddPTM_KYSE-520_SHP099_60min_R1 4 TKDSGSISLQETR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 TKDS(0.491)GS(0.491)IS(0.017)LQETR;TKDS(0.613)GS(0.384)IS(0.002)LQETR;TKDS(0.48)GS(0.48)IS(0.041)LQETR;T(0.152)KDS(0.585)GS(0.26)IS(0.003)LQETR 167.92 1.1876999999999999e-06 740950000.0 1890190.0 1717690.0 1691370.0 1491940.0 1449490.0 1322290.0 1221090.0 1464110.0 1696460.0 1629580.0 True False 1785337.392699652 1635169.5940947447 1800398.4164876817 1633733.5290318844 1563556.6165300598 1314037.0976314305 1344529.6938899648 1459031.3441358414 1388425.62827643 1615143.1889940572 1.1053740652007422 1.012399151503812 1.1146989497624697 1.011510025962098 0.9680606816686472 0.8135731287390305 0.8324523194301827 0.9033448886005919 0.8596300549310236 1.0 20.62323064067952 -5.859261307472933 2.2991377426759247 0.8736106383529691 1.0679601965704186 0.6917970237332601 0.056364001948420665 0.15626439072394394 1.688066770339245 0.01842268388811124 0.022058118208061143 1.3827341614190637e-06 5.859261307472933 0.19434955821744948 TKDSGS(ph)ISLQETR ddPTM_KYSE-520_SHP099_60min_R1 1 TKDSGSISLQETR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 TKDS(0.399)GS(0.56)IS(0.041)LQETR 85.619 0.0052045 413220000.0 484020.0 421000.0 479000.0 444440.0 357370.0 387250.0 350820.0 393210.0 530580.0 399170.0 True False 457170.445730051 400774.5280661165 509877.10642709833 486679.4439742411 385492.9858428462 384833.0291069062 386284.30927325424 391846.04628590384 434240.0468333518 395633.66434956057 1.155539800895507 1.0129939997017385 1.2887606702158652 1.230126472615428 0.9743685145616057 0.9727004140044273 0.9763686563637676 0.9904264515258484 1.0975811361939127 1.0 18.593805664244186 -5.769104613684651 24.999843165295648 0.9986915314760297 1.1688583971912507 0.5607736226288109 0.07363157730183796 137.4090840929874 448152.8676978667 0.02396725474787248 0.027685342739299585 1.7017485385801011e-06 5.769104613684651 0.170166865715221 TKDSGSIS(ph)LQETR ddPTM_KYSE-520_SHP099_60min_R1 1 TKDSGSISLQETR 13 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 TKDS(0.265)GS(0.265)IS(0.471)LQETR 114.31 0.00021445 649550000.0 1000500.0 910330.0 856130.0 787770.0 710610.0 625240.0 636480.0 730240.0 919340.0 806310.0 True False 945000.2705526968 866596.3803668132 911317.509656432 862639.4239483131 766530.9641821776 621337.6452389974 700821.6098461918 727706.9678792966 752411.0306754378 799166.7206996876 1.182482010418713 1.0843749594678935 1.140334658653646 1.0794236066199725 0.9591627683283198 0.7774818809959991 0.876940432695455 0.9105821714424914 0.9414944481380378 1.0 19.608136981389492 -5.780462477572846 2.899398159494026 0.8922416063427252 1.1274312781975164 0.7643995108119405 0.05823370950873001 0.11961877156523397 2.064207694304978 0.018842069743211672 0.02329499557039151 1.6578205640064547e-06 5.780462477572846 0.23518967185479123 TKECS(ph)VEK ddPTM_KYSE-520_SHP099_60min_R1 8 TKECSVEK 8 1 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 T(0.001)KECS(0.999)VEK;TKECS(1)VEK;TKECS(1)VEK;TKECS(1)VEK;TKECS(1)VEK;T(0.001)KECS(0.999)VEK;T(0.002)KECS(0.998)VEK;T(0.012)KECS(0.988)VEK 118.4 0.0022018000000000003 27422560000.0 33261100.0 24653000.0 22772100.0 27406300.0 28439900.0 29703900.0 31628800.0 26901300.0 32220200.0 31452900.0 True False 31416040.47864098 23468632.8750926 24240026.002648238 30010986.511995457 30677958.329104174 29518506.941997755 34826147.77134117 26807985.669110637 26369823.885144524 31174251.77598591 1.0077560386819395 0.7528210474379664 0.7775656069256734 0.9626850622638988 0.9840800205744139 0.9468874234452803 1.1171446237618565 0.8599399870684727 0.8458847408635377 1.0 24.893851598058664 -5.279728879692023 23.70021245520781 0.9607465853710151 0.8367249191068705 0.22945459984486793 0.09480928533273113 561.545600547502 727670.348698763 0.027256730175791485 0.040536761325233144 5.251351880667111e-06 5.279728879692023 -0.12402166626414457 TKECS(ph)VEKGTGDSLR ddPTM_KYSE-520_SHP099_60min_R1 3 TKECSVEKGTGDSLR 15 2 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 T(0.054)KECS(0.942)VEKGT(0.001)GDS(0.003)LR;T(0.009)KECS(0.955)VEKGT(0.01)GDS(0.026)LR;T(0.013)KECS(0.984)VEKGT(0.002)GDSLR 83.229 0.0038162 2793480000.0 1837850.0 2111990.0 2269460.0 1300350.0 1521360.0 1446430.0 1134500.0 1048190.0 2683680.0 1343480.0 True False 1735900.796836856 2010526.8302383781 2415753.022864386 1423934.8730355164 1641082.376645697 1437402.2938440354 1249186.3316530033 1044554.0735393851 2196391.362067417 1331577.812411623 1.3036420257656314 1.5098830962023235 1.814203421194899 1.0693591165030192 1.2324344558381681 1.0794729984579372 0.9381249221858088 0.7844483918274301 1.6494652746500247 1.0 20.344705306021623 -5.283526437308745 24.909826938193696 1.0955998084453393 1.5393068741096558 0.4021206233053515 0.24272701294038906 711.521830601551 802454.1032334041 0.06767658687535058 0.10047240155396849 5.2056331898587895e-06 5.283526437308745 0.4437070656643165 TKEDEKDDKPIR ddPTM_KYSE-520_SHP099_60min_R1 1 TKEDEKDDKPIR 12 3 C9JLS9;P35998 C9JLS9 PSMC2 26S protease regulatory subunit 7 0 125.61 4.8033e-05 7253900000.0 8730100.0 7197800.0 5591300.0 5321800.0 7781100.0 7385200.0 5788500.0 7644600.0 7546500.0 5367900.0 False True 8245823.949977111 6852006.883881942 5951724.144396306 5827582.271942491 8393428.30159713 7339106.227399163 6373658.070315917 7618082.666863047 6176245.831783878 5320344.582163002 1.5498665213569205 1.2878878008868062 1.1186726822826605 1.0953392551828418 1.577609903263964 1.379441897805692 1.197978433893973 1.4318776818335124 1.160873273601558 1.0 22.343088256945133 -8.000749690280719 5.842123897018112 1.0001667084493435 1.3185116152095704 0.31457467796602134 0.15573890259841078 0.16346180572689314 24.94925218246725 0.15527798977998025 0.040324872903806736 9.982752634058303e-09 8.000749690280719 0.31834490676022686 TKEELEAEKR ddPTM_KYSE-520_SHP099_60min_R1 2 TKEELEAEKR 10 2 P12270;P12270-2 P12270 TPR Nucleoprotein TPR 0 ; 132.32 0.00021566 1235470000.0 1482540.0 1262290.0 868120.0 840780.0 1417940.0 1230540.0 962580.0 1165940.0 1145670.0 1020570.0 False True 1400300.5508297808 1201647.6936640833 924080.4042411101 920687.4784102764 1529523.8110250025 1222859.7434143643 1059886.9802754943 1161895.6262724428 937645.2079904377 1011528.5437914445 1.3843411136784418 1.1879523331689958 0.9135485201212825 0.9101942639792697 1.512091596834224 1.2089226259802826 1.0478072880699847 1.1486533261012957 0.926958723750815 1.0 19.94810560044661 -7.566445819623218 1.76839567621724 0.9668956815366089 1.1665795501702365 0.1569812703057426 0.17905575781677927 0.7928990614821255 4.461138184887891 0.17114044558740693 0.054476471237311114 2.713652172515375e-08 7.566445819623218 0.19968386863362764 TKEGVGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 TKEGVGSPK 9 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 TKEGVGS(1)PK 70.889 0.014628 2043400000.0 1657400.0 1425500.0 1193700.0 1387300.0 1454600.0 1624600.0 1416800.0 1367600.0 1767500.0 1506100.0 True False 1565460.718055014 1357016.8402808767 1270647.8119875302 1519148.574893046 1569068.7444581357 1614460.2687852273 1560023.9706354998 1362856.1148002404 1446566.555049096 1492757.1257280686 1.048704233980116 0.9090674007796233 0.8512086729231266 1.017679667181026 1.0511212557051752 1.0815290987124244 1.0450621495942436 0.9129791386093896 0.9690568747702719 1.0 20.509548024809384 -3.9210316670426377 18.289182531223513 0.9832488918037217 2.8695160768086545 0.07736214457951773 0.06901404077943052 439.74321702701843 114091.99516723055 0.018706990096847273 4054.503477642569 0.0001199411843574483 3.9210316670426377 1.8862671850049328 TKETDSPS(ph)TPGKDQR ddPTM_KYSE-520_SHP099_60min_R1 3 TKETDSPSTPGKDQR 15 2 A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;Q7Z5J4 A0A1W2PQJ7 RAI1 Retinoic acid-induced protein 1 1 TKETDS(0.064)PS(0.468)T(0.468)PGKDQR;T(0.001)KET(0.003)DS(0.062)PS(0.467)T(0.467)PGKDQR;TKETDS(0.061)PS(0.469)T(0.469)PGKDQR 106.16 0.00035753 2706500000.0 3418020.0 3122610.0 3439090.0 2595490.0 2628560.0 2806180.0 2565650.0 2813360.0 4063700.0 3096850.0 True False 3228415.6169460565 2972595.128466834 3660779.2441385533 2842164.5892374795 2835412.717539447 2788665.5897203847 2825010.9403310097 2803601.110803158 3325834.5175405997 3069414.318312844 1.051801836488666 0.9684567869289056 1.1926637672527582 0.9259631625096881 0.9237634361131084 0.9085334531355228 0.9203745885579322 0.9133993720157679 1.0835404323547633 1.0 21.54953196737083 -5.337200992039563 24.999999820155498 0.9455329470575589 1.060729382147028 0.3514567538162109 0.07204498868388333 131.82423609816664 43498.92693290882 0.019859560873660555 0.029456490335681255 4.6004361553511485e-06 5.337200992039563 0.1151964350894692 TKETDSPST(ph)PGKDQR ddPTM_KYSE-520_SHP099_60min_R1 2 TKETDSPSTPGKDQR 15 2 A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;Q7Z5J4 A0A1W2PQJ7 RAI1 Retinoic acid-induced protein 1 1 TKETDS(0.008)PS(0.058)T(0.934)PGKDQR;TKET(0.001)DS(0.112)PS(0.181)T(0.706)PGKDQR 107.72 0.00031814 1736200000.0 3449200.0 3164100.0 3382000.0 2508700.0 2912300.0 2829100.0 2570400.0 2954600.0 4280300.0 3079000.0 True False 3257866.000190265 3012091.8865890717 3600009.1313913264 2747126.093731842 3141481.4412796833 2811442.5374986376 2830241.1166865444 2944351.1822088216 3503105.4175822637 3051722.4554257486 1.0675498993684722 0.9870137047468991 1.1796646595403073 0.9001887078058637 1.029412565252895 0.9212641642755192 0.9274241540722598 0.9648161735592867 1.1479108827062525 1.0 21.541192328879166 -5.27414172677345 24.8605589285273 0.9798319638580865 1.0689698601743665 0.22286337310638182 0.07926725375115387 1084.034736565149 2121630.2943856707 0.022042982360008186 0.032928754035874454 5.319346404759299e-06 5.27414172677345 0.08913789631628 TKEVYELLDS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 14 TKEVYELLDSPGK 13 1 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK;TKEVYELLDS(1)PGK 224.86 8.4501e-12 26504479000.0 28373470.0 25598400.0 23945780.0 23824890.0 23861180.0 24058780.0 23195500.0 23493410.0 28735780.0 23639970.0 True False 26799537.057989832 24368614.44001824 25489363.293402676 26089200.38238565 25738919.114457298 23908620.229868717 25540327.50626463 23411916.84411314 23518086.72206436 23430538.257418368 1.1437866584010208 1.0400364759995586 1.0878693017362697 1.113469955139657 1.0985201804447693 1.0204042249135692 1.0900444209034883 0.9992052502976823 1.0037365110303547 1.0 24.481886761066814 -7.043502496223321 0.9075432355876295 0.9929656815684719 1.09314267299088 0.5708553589902507 0.033060702407463095 0.4432269505417728 0.6714658810452012 0.027719664939520966 0.013070473717271042 9.046852378035744e-08 7.043502496223321 0.1001769914224081 TKEVYELLDS(ph)PGKVLLQSK ddPTM_KYSE-520_SHP099_60min_R1 2 TKEVYELLDSPGKVLLQSK 19 2 E9PBS1;P22234;P22234-2 E9PBS1 PAICS Multifunctional protein ADE2;Phosphoribosylaminoimidazole-succinocarboxamide synthase;Phosphoribosylaminoimidazole carboxylase 1 T(0.01)KEVY(0.002)ELLDS(0.988)PGKVLLQSK;TKEVYELLDS(1)PGKVLLQSK 269.27 1.6530000000000002e-35 1666135000.0 1723390.0 1965080.0 2164280.0 1196750.0 1440590.0 1535580.0 979660.0 1113220.0 2319320.0 1131480.0 True False 1627790.1212072102 1870674.6071547866 2303792.9517704393 1310488.760183991 1553956.2371641302 1525995.8756255207 1078693.5933602303 1109358.4996475005 1898189.953299276 1121455.9674781207 1.451497132667376 1.668076733642494 2.0542874785811738 1.1685601558935557 1.3856596087839244 1.360727411399942 0.961868878174457 0.989212712597335 1.692612111706748 1.0 20.09694154530069 -5.28392122543971 24.763329379306803 1.2238912644908428 1.7189660997183003 0.45719069527907896 0.25061541147822197 619.0949839422891 681920.0398736498 0.07106446650584872 0.10549589087601768 5.200903246286251e-06 5.28392122543971 0.49507483522745743 TKEYVSNDAAQS(ph)DDEEKLQSQPTDTDGGR ddPTM_KYSE-520_SHP099_60min_R1 4 TKEYVSNDAAQSDDEEKLQSQPTDTDGGR 29 2 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 TKEYVSNDAAQS(1)DDEEKLQSQPTDTDGGR;TKEYVSNDAAQS(1)DDEEKLQSQPTDTDGGR;TKEYVSNDAAQS(1)DDEEKLQSQPTDTDGGR;TKEYVSNDAAQS(1)DDEEKLQSQPTDTDGGR 313.02 7.152699999999998e-65 8460820000.0 2442450.0 2177730.0 2000630.0 1778130.0 2056440.0 1788020.0 1752840.0 1682980.0 2531900.0 1752900.0 True False 2306962.429596634 2073108.581960627 2129593.810921178 1947122.9405857234 2218270.128456955 1776860.303947656 1930034.1732698577 1677142.135190484 2072170.7840049805 1737370.6697355618 1.3278469987914368 1.1932448371976756 1.2257567415048598 1.1207297179030236 1.2767972702075077 1.0227295388946014 1.110893723999393 0.9653335148369664 1.192705057188733 1.0 20.72847415661318 -1.0000000000032268 0.1863293739938532 0.9944677307903607 2.377821550023617 0.5195058782957678 0.0796147418370821 42.66095293483204 0.49160579333335225 0.16074158214175344 16.881299250306522 0.09999999999925702 1.0000000000032268 1.3833538192332562 TKFAS(ph)DDEHDEHDENGATGPVK ddPTM_KYSE-520_SHP099_60min_R1 6 TKFASDDEHDEHDENGATGPVK 22 1 P05455 P05455 SSB Lupus La protein 1 T(0.258)KFAS(0.742)DDEHDEHDENGATGPVK;T(0.04)KFAS(0.96)DDEHDEHDENGATGPVK;TKFAS(1)DDEHDEHDENGATGPVK;T(0.251)KFAS(0.749)DDEHDEHDENGATGPVK;T(0.001)KFAS(0.999)DDEHDEHDENGATGPVK;T(0.001)KFAS(0.999)DDEHDEHDENGATGPVK 265.45 3.3961999999999996e-36 19060740000.0 10888960.0 9782690.0 9719170.0 9297490.0 9706250.0 10158120.0 9572910.0 9749310.0 12207760.0 8860700.0 True False 10284927.682196395 9312714.888282947 10345683.249421833 10181120.65420771 10470076.653992016 10094719.4051167 10540633.165398298 9715491.919116048 9991138.51658623 8782201.091520283 1.1711104739023888 1.0604078398153403 1.1780285080708504 1.1592903132266197 1.1921927709104125 1.149452090645445 1.2002268059627876 1.1062707193640682 1.1376576797169042 1.0 23.06615113845244 -8.514562011346545 1.1234330139388453 1.000046965641946 1.1546796263625 0.5801538207081809 0.03893081005490742 1.5038932690538191 2.586337920678441 0.037827218478771484 0.01164472012826775 3.058003574007749e-09 8.514562011346545 0.15463266072055415 TKFAS(ph)DDEHDEHDENGATGPVKR ddPTM_KYSE-520_SHP099_60min_R1 9 TKFASDDEHDEHDENGATGPVKR 23 2 P05455 P05455 SSB Lupus La protein 1 T(0.073)KFAS(0.927)DDEHDEHDENGATGPVKR;T(0.023)KFAS(0.977)DDEHDEHDENGATGPVKR;T(0.01)KFAS(0.989)DDEHDEHDENGATGPVKR;T(0.18)KFAS(0.82)DDEHDEHDENGATGPVKR;T(0.003)KFAS(0.997)DDEHDEHDENGATGPVKR;T(0.006)KFAS(0.994)DDEHDEHDENGATGPVKR;TKFAS(1)DDEHDEHDENGATGPVKR;T(0.051)KFAS(0.949)DDEHDEHDENGATGPVKR;T(0.006)KFAS(0.994)DDEHDEHDENGATGPVKR 216.6 4.1679e-21 20136610000.0 10694300.0 11679880.0 13931520.0 7922616.0 8993732.0 8316307.0 5933156.0 6225861.0 16114260.0 6039680.0 True False 10101065.860441484 11118761.032942707 14829568.070420142 8675579.042618636 9701487.541064857 8264401.843235549 6532937.31050243 6204264.941317881 13188316.591437304 5986173.133999934 1.6873995513210283 1.857407192216173 2.4773035691520486 1.4492696499778068 1.6206493403879159 1.3805818271937136 1.091337848783059 1.0364325926490903 2.2031298287266425 1.0 22.51320257484762 -5.414859214592507 8.754796060689594 1.3895638365523528 1.9919015406707794 0.3544688627407382 0.3778006664805704 0.37073905789617023 27.469653489364322 0.10592467003955529 0.15719321125021668 3.8471647551959e-06 5.414859214592507 0.6023377041184266 TKFEECR ddPTM_KYSE-520_SHP099_60min_R1 2 TKFEECR 7 1 P43487-2;P43487;F6WQW2;C9JXG8;C9JGV6 P43487-2 RANBP1 Ran-specific GTPase-activating protein 0 ; 120.15 0.0027715 6640600000.0 7693100.0 6451400.0 4811600.0 4475300.0 7241600.0 7204700.0 5652500.0 6551100.0 5992000.0 6040600.0 False True 7266348.407185367 6141465.06025118 5121763.434832202 4900631.16645199 7811472.720932232 7159732.794852225 6223909.863083824 6528375.763138238 4904003.846027824 5987084.98351568 1.2136704969433205 1.0257855161836782 0.8554686377317211 0.8185337572366121 1.304720534690866 1.1958628973140037 1.0395559575686995 1.0904097371446875 0.819097083059633 1.0 22.513422318005922 -7.746364525885092 24.995636071814037 0.9095485111284811 1.062398345862076 0.15316492698613382 0.14856507484919054 434.24664898537696 720032.3852394271 0.10911335088265783 0.04088611567114561 1.7932278458368965e-08 7.746364525885092 0.15284983473359492 TKFEECRK ddPTM_KYSE-520_SHP099_60min_R1 2 TKFEECRK 8 2 P43487-2;P43487;F6WQW2;C9JXG8;C9JGV6 P43487-2 RANBP1 Ran-specific GTPase-activating protein 0 ; 79.97399999999999 0.0074131 7339100000.0 21246000.0 20584500.0 14073300.0 11562100.0 18517600.0 17806700.0 11546200.0 14018700.0 18127700.0 12122900.0 False True 20067442.027149048 19595589.72203557 14980487.436076136 12660958.50772789 19974829.769268513 17695561.780239996 12713402.576052822 13970072.401689189 14836166.642129287 12015500.537473494 1.6701295101742504 1.6308592106439157 1.2467634943176567 1.0537187750307502 1.6624217781832524 1.4727278089707323 1.058083476123424 1.1626708648649176 1.2347522765163885 1.0 23.51839341321112 -1.0000000000000635 0.15719051798489433 0.9806230912249342 3.4412040028294353 0.4422984316139207 0.18879062917230377 69.932723840282 0.7138219730382936 0.6487611164545457 39.67960927926663 0.09999999999998538 1.0000000000000635 2.460580911604501 TKFENLCK ddPTM_KYSE-520_SHP099_60min_R1 2 TKFENLCK 8 1 P07900;P07900-2;Q58FG0 P07900 HSP90AA1;HSP90AA5P Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5 0 ; 79.97399999999999 0.01227 4004800000.0 2898320.0 2548370.0 1615580.0 1773520.0 2771100.0 2575280.0 2041560.0 2531950.0 2335260.0 2049610.0 False True 2737544.4119423227 2425942.480018644 1719722.8718193958 1942074.8075717674 2989169.8045977834 2559206.722268387 2247940.8085055156 2523167.256411573 1911235.6511139765 2031452.0499724515 1.347580127219565 1.1941913568924958 0.846548591606047 0.9560032724366316 1.471444922678987 1.2597918431316617 1.1065684806766667 1.242051101548663 0.940822428538195 1.0 20.954079881181695 -7.768897595790919 24.986101654764248 0.9704110979950591 1.1702362540214586 0.18975419031365326 0.17099796070058051 349.95120319870773 1172337.6617524072 0.16537006754495576 0.046053791781297856 1.7025599151710236e-08 7.768897595790919 0.1998251560263995 TKHEIHHTGER ddPTM_KYSE-520_SHP099_60min_R1 4 TKHEIHHTGER 11 1 Q86T24 Q86T24 ZBTB33 Transcriptional regulator Kaiso 0 ;;; 138.45 0.00037909 746950000.0 780110.0 830070.0 707310.0 1823000.0 595170.0 698260.0 762720.0 755110.0 882130.0 392771.0 False True 736835.7431892691 790192.1912395284 752904.3343360141 1996257.3718950662 642006.4929459289 693901.9003336036 839823.1810298637 752490.6996539994 721957.4286876719 389291.3545112145 1.8927616415073578 2.0298220910445752 1.934038158338615 5.127926291611388 1.6491670968445162 1.7824744687814897 2.1573126947150594 1.9329756259262678 1.8545426717583942 1.0 18.570490779712053 TKIDWNK ddPTM_KYSE-520_SHP099_60min_R1 1 TKIDWNK 7 1 P52907;P47755 P52907 CAPZA1;CAPZA2 F-actin-capping protein subunit alpha-1;F-actin-capping protein subunit alpha-2 0 109.71 0.0033164 2117700000.0 4676100.0 4279800.0 3235100.0 2365100.0 4328100.0 4260400.0 3199800.0 3532500.0 3602300.0 3294800.0 False True 4416707.411425755 4074191.9838892273 3443639.7223430118 2589878.392906757 4668696.846479619 4233809.263284867 3523267.0110385907 3520246.581991694 2948213.126593128 3265610.635315614 1.352490515452676 1.2476049470899233 1.0545163238697597 0.7930762978595124 1.4296550837967246 1.2964831806642125 1.0788999070913654 1.0779749869510913 0.9028060769737755 1.0 21.638921355329035 -7.349299747663015 2.0988052826221235 0.9610650541705469 1.1808731432278674 0.2240601701073054 0.17022791664662518 0.5894977589455874 4.812121225811278 0.13781636861043722 0.05233689049529386 4.4740440152972744e-08 7.349299747663015 0.21980808905732052 TKKDDS(ph)HS(ph)AEDS(ph)EDEKEDHK ddPTM_KYSE-520_SHP099_60min_R1 4 TKKDDSHSAEDSEDEKEDHK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 3 T(0.063)KKDDS(0.956)HS(0.981)AEDS(1)EDEKEDHK;TKKDDS(1)HS(1)AEDS(1)EDEKEDHK;T(0.001)KKDDS(0.999)HS(1)AEDS(1)EDEKEDHK;TKKDDS(1)HS(1)AEDS(1)EDEKEDHK 174.49 1.8374e-09 2682520000.0 2719060.0 2376756.0 2483493.0 2309662.0 2285838.0 2403547.0 2091934.0 2280951.0 2954290.0 1575732.0 True False 2568228.3214882696 2262573.074176509 2643582.9325092924 2529171.5820547994 2465720.445960878 2388545.5716225095 2303407.1040283786 2273038.9133589673 2417865.4075903776 1561772.2403809442 1.6444320465459372 1.4487215329327578 1.692681470548148 1.6194240854466009 1.578796435362076 1.5293814999810091 1.4748674899398495 1.4554227912288493 1.5481549390329905 1.0 20.574752644038764 -11.833723592309312 0.2600536411972125 2.2686999942430635e-19 1.6122337210961994 0.8566777359936992 0.06948570490153094 18.983858018716855 0.5116713482753935 10.58345573555843 0.09754202440669249 1.466480889033542e-12 11.833723592309312 1.6122337210961994 TKKDDS(ph)HSAEDS(ph)EDEKEDHK ddPTM_KYSE-520_SHP099_60min_R1 1 TKKDDSHSAEDSEDEKEDHK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 TKKDDS(0.519)HS(0.481)AEDS(1)EDEKEDHK 146.34 1.7155000000000001e-06 3642700000.0 824810.0 960240.0 949480.0 698190.0 717330.0 811690.0 555920.0 531040.0 1123800.0 333300.0 True False 779056.1450820292 914108.6290503758 1010685.0000217137 764545.767681522 773779.7899506084 806623.941628883 612117.8188563582 529197.9461856678 919746.2486926019 330347.22130347625 2.3582948329580247 2.7671146300050826 3.059462695141726 2.3143702092144 2.3423226836824793 2.4417458044481966 1.8529528307853724 1.6019445966506727 2.784180369562332 1.0 18.333623684057237 -9.473723918387616 0.16704627440079883 6.357230740302901e-14 3.0430698009961956 0.5668947151127204 0.38425915080842005 12.793854496545844 0.5845751641352842 8.792165758306899 2.1239355374445292 3.3595111096897663e-10 9.473723918387616 3.043069800996132 TKKDDSHS(ph)AEDS(ph)EDEKEDHK ddPTM_KYSE-520_SHP099_60min_R1 2 TKKDDSHSAEDSEDEKEDHK 20 3 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 2 TKKDDS(0.003)HS(0.997)AEDS(1)EDEKEDHK;TKKDDS(0.278)HS(0.722)AEDS(1)EDEKEDHK 206.08 6.009e-14 4992100000.0 1723380.0 1871240.0 1750150.0 1334400.0 1421610.0 1290540.0 1013340.0 1155020.0 2276010.0 797540.0 True False 1627780.6759271414 1781342.8216114978 1862967.4693390068 1461220.9747980123 1533482.6191455605 1282485.2611584943 1115778.2964453555 1151013.5052036946 1862743.9575430232 790474.416076731 2.0592452365582106 2.253511037653347 2.3567713659668517 1.8485367079308133 1.9399522463440562 1.6224247554066367 1.4115299290559802 1.4561046907961739 2.3564886094456563 1.0 19.592359244551744 -5.798150067367388 1.3894176162564178 1.5882446586749897 2.2174475659340565 0.40240017232126035 0.33213332944527685 0.4323496773869941 1.7448760981689013 0.1267983482077127 0.17119156683924902 1.5916586457009616e-06 5.798150067367388 0.6292029072590668 TKLEEALS(ph)PEVLELR ddPTM_KYSE-520_SHP099_60min_R1 1 TKLEEALSPEVLELR 15 1 Q9Y3E2 Q9Y3E2 BOLA1 BolA-like protein 1 1 TKLEEALS(1)PEVLELR 152.13 6.8355e-05 0.0 135370.0 125190.0 117640.0 99538.0 107870.0 120690.0 104840.0 107390.0 143070.0 113560.0 True False 127860.7562465953 119175.68448597907 125223.2626306551 108998.06159280914 116358.75530365684 119936.72894231758 115438.25033979816 107017.48915501451 117092.09450120172 112553.94674834314 1.1359953154950337 1.0588316796428412 1.112562164618172 0.9684072815013363 1.0338043104238788 1.06559327688865 1.025625965812678 0.9508106312281748 1.040319756738565 1.0 16.780257120784018 -1.0000000000000042 0.37883812125612304 1.0032208655817634 2.8439914627625558 0.48666690326754636 0.03950935881836668 58.532843853556685 0.8015763842663932 0.03043546217945752 79.00521838476388 0.09999999999999903 1.0000000000000042 1.8407705971807924 TKPATPS(ph)L ddPTM_KYSE-520_SHP099_60min_R1 2 TKPATPSL 8 1 Q8TD16 Q8TD16 BICD2 Protein bicaudal D homolog 2 1 TKPAT(0.002)PS(0.998)L;TKPAT(0.003)PS(0.997)L 107.08 0.0023647 4792900000.0 10590600.0 9428000.0 9127400.0 8302800.0 8582800.0 8958700.0 8836700.0 9256500.0 10957000.0 9009300.0 True False 10003118.306162314 8975064.72828349 9715766.808356341 9091895.615672147 9258217.530548114 8902785.430238962 9729999.873881085 9224391.361983338 8967485.003492467 8929484.611129347 1.1202346766682183 1.0051044510561487 1.0880546001778202 1.018188172287164 1.0368143217368948 0.9970099975471027 1.0896485404940401 1.03302617829549 1.0042556086961343 1.0 23.090145478105683 -4.24924730489371 24.484314969341895 1.0337202323928862 1.1202347479614747 0.4060604432350454 0.03240867562174836 1464.843142619568 2941648.3015195 0.007699289335258356 0.12560021105144473 5.633167890485859e-05 4.24924730489371 0.08651451556858847 TKPIVKPQTS(ph)PEYGQGINPISR ddPTM_KYSE-520_SHP099_60min_R1 3 TKPIVKPQTSPEYGQGINPISR 22 2 O95793-2;O95793-3;O95793;A0A087X1A5 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 TKPIVKPQT(0.013)S(0.984)PEY(0.002)GQGINPISR;TKPIVKPQT(0.084)S(0.911)PEY(0.005)GQGINPISR;TKPIVKPQT(0.043)S(0.957)PEYGQGINPISR 188.73 8.4038e-14 15490500000.0 13068800.0 11424500.0 11441900.0 11508400.0 11276500.0 11565100.0 11527300.0 11621400.0 13624900.0 11390100.0 True False 12343847.611993095 10875649.871475894 12179463.181687284 12602154.875873383 12163896.395491663 11492917.921043975 12692591.979606586 11581088.075855155 11150961.61577845 11289192.57536372 1.0934216534609338 0.9633682656109264 1.078860432256811 1.1163025868984577 1.0774815217553113 1.0180460510634608 1.1243135321568958 1.0258561893193703 0.9877554609275663 1.0 23.428438969704697 -7.51450457480107 17.95287897907015 0.9981856779258361 1.0649861391035589 0.3085257609696853 0.04466763007433533 12.782553688806312 27423.56071066203 0.02770564823533716 0.011694097007905482 3.0584080294721054e-08 7.51450457480107 0.06680046117772276 TKPIWTR ddPTM_KYSE-520_SHP099_60min_R1 2 TKPIWTR 7 1 P08238;P07900;P07900-2;Q58FG0;Q14568;Q58FF8 P08238;P07900;Q58FF8 HSP90AB1;HSP90AA1;HSP90AA5P;HSP90AA2P;HSP90AB2P Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-alpha A5;Heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-beta 2 0 ; 141.2 0.0017929999999999999 7319900000.0 1813490.0 1556680.0 1115330.0 1195590.0 1477820.0 1621950.0 1324410.0 1613450.0 1448380.0 1272210.0 False True 1712892.0945973096 1481894.7561756843 1187225.9563910952 1309218.5141327598 1594116.0263544088 1611826.8084181976 1458294.2877959933 1607853.3185320604 1185390.7026885485 1260939.209164404 1.3584255943095025 1.1752309273955424 0.9415409940165498 1.0382883683983062 1.2642290879437348 1.2782747944576318 1.1565143483502047 1.2751235799841203 0.9400855283690323 1.0 20.266067293244774 -7.773269893839975 24.99611231446873 0.9700426086468759 1.1772320552483844 0.35018961851876207 0.11716473079333689 313.91379991605004 663231.7472521563 0.11823200410832164 0.03152961351611016 1.6855052366628898e-08 7.773269893839975 0.2071894466015085 TKPLT(ph)PSIGAK ddPTM_KYSE-520_SHP099_60min_R1 1 TKPLTPSIGAK 11 1 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61;A0A2R8YCQ1;A0A2R8YD28;A0A2R8Y7Y0 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 T(0.002)KPLT(0.986)PS(0.013)IGAK 134.02 0.00038712 392960000.0 898470.0 1010700.0 677660.0 591580.0 649770.0 849830.0 700590.0 847920.0 939520.0 906190.0 True False 848630.07804446 962144.4549083714 721343.0478943372 647803.5853349867 700903.2023144256 844525.8957415678 771412.4742994952 844978.7634260163 768926.8513718398 898161.8616051524 0.9448520520876142 1.0712372636140133 0.8031325741277714 0.7212548350441677 0.7803751553888122 0.940282516819709 0.8588791255518948 0.940786732934652 0.8561116701143935 1.0 19.776615937100622 -9.18368179617189 14.047323746842974 0.9999999997671002 0.8784318817802972 0.12618177801164643 0.09495757804101372 0.0 0.0 0.10065921530409562 0.02441344569944565 6.551159961156203e-10 9.18368179617189 -0.121568117986803 TKPPRPDS(ph)PATTPNISVK ddPTM_KYSE-520_SHP099_60min_R1 5 TKPPRPDSPATTPNISVK 18 2 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 T(0.008)KPPRPDS(0.793)PAT(0.135)T(0.063)PNISVK;T(0.025)KPPRPDS(0.343)PAT(0.334)T(0.298)PNISVK;TKPPRPDS(1)PATTPNISVK;TKPPRPDS(0.999)PAT(0.001)TPNISVK;T(0.041)KPPRPDS(0.892)PAT(0.056)T(0.011)PNISVK 230.55 2.4139999999999997e-19 7337820000.0 7148410.0 5712560.0 5192930.0 4939000.0 5436140.0 5409060.0 5502890.0 6132560.0 6718630.0 5823680.0 True False 6751873.44729796 5438120.042872623 5527674.576781776 5408401.075035498 5863933.2905944185 5375300.050151071 6059175.824230944 6111287.580710259 5498696.154879499 5772086.72595448 1.1697456687436485 0.9421410836430855 0.957656189039279 0.936992344677766 1.0159121941510245 0.9312576725468733 1.0497374886946091 1.0587657238811998 0.9526357478577607 1.0 22.460661545896958 -6.798533656359998 24.99859130647617 1.0201818367651343 0.9869914871886087 0.019698535518698046 0.07074308518531625 632.7107282137762 426391.11402803776 0.029132397757007662 0.019641610977038735 1.5902534397601217e-07 6.798533656359998 -0.03319034957652556 TKPSDEEMLFIY(ph)GHYK ddPTM_KYSE-520_SHP099_60min_R1 1 TKPSDEEMLFIYGHYK 16 1 B8ZWD1;A0A0A0MTI5;P07108;P07108-3;P07108-2;P07108-4;P07108-5;P07108-6 B8ZWD1 DBI Acyl-CoA-binding protein 1 TKPSDEEMLFIY(1)GHYK 188.63 1.1044e-09 0.0 290570.0 260560.0 225090.0 253840.0 237510.0 232870.0 225590.0 274090.0 290660.0 235370.0 True False 274451.50286306534 248042.3064914665 239599.66155673368 277964.8772802212 256200.68575295733 231416.57195125968 248394.83874623262 273139.2457630869 237883.47094233107 233284.80491508904 1.1764654065787103 1.0632595919899237 1.0270693011657708 1.1915258577659817 1.0982313479277366 0.9919916217238866 1.0647707588012143 1.1708402776704812 1.019712668507989 1.0 17.83173281438826 -6.021518263253207 24.670554278527305 1.0593211081767762 1.109690411109641 0.17882015517966254 0.06498100883610514 1495.3682182294792 1714428.698399381 0.021786384402084503 0.02199278448996671 9.5165982741139e-07 6.021518263253207 0.0503693029328649 TKPSDEEMLFIYGHYK ddPTM_KYSE-520_SHP099_60min_R1 2 TKPSDEEMLFIYGHYK 16 1 B8ZWD1;A0A0A0MTI5;P07108;P07108-3;P07108-2;P07108-4;P07108-5;P07108-6 B8ZWD1 DBI Acyl-CoA-binding protein 0 ; 91.307 0.0039735 270490000.0 904330.0 684680.0 538980.0 488160.0 772510.0 673960.0 554810.0 517940.0 600600.0 526870.0 False True 854165.0121628396 651786.9450743682 573723.513198491 534554.5796293446 833302.1420193554 669753.5656472318 610895.6092238026 516143.3870281054 491546.1798939106 522202.3416986569 1.6356973991812274 1.2481501767192182 1.098661318392871 1.0236541220602486 1.5957457013860392 1.2825556535587523 1.1698446376870657 0.9883973046715139 0.9412944765720013 1.0 18.99424940154269 -7.091378054408232 2.4754226089995677 0.9675286274891678 1.2999573898705301 0.4139423006024273 0.1794602723922484 0.33409194520919877 3.9734789259833865 0.10828442293145867 0.055414216937100545 8.102554214440623e-08 7.091378054408232 0.3324287623813623 TKPTQAAGPS(ph)SPQKPPT(ph)PEETK ddPTM_KYSE-520_SHP099_60min_R1 1 TKPTQAAGPSSPQKPPTPEETK 22 2 P18887;F5H8D7 P18887 XRCC1 DNA repair protein XRCC1 2 TKPT(0.007)QAAGPS(0.716)S(0.287)PQKPPT(0.987)PEET(0.003)K 97.304 0.0049651 13924000000.0 1196700.0 1027300.0 957500.0 945310.0 983420.0 934590.0 915670.0 1004200.0 1111600.0 793580.0 True False 1130316.6654376923 977946.9659912641 1019221.9820541681 1035151.9781821847 1060809.5591056095 928756.8771414411 1008234.8596780138 1000716.6645820425 909761.4611556294 786549.4985958983 1.4370572576239218 1.2433381087103066 1.2958141653813562 1.3160671769927728 1.3486876045300444 1.1807990200227743 1.2818454038529745 1.272286952529323 1.156648707779589 1.0 19.585178033633756 -13.999999236379308 0.12109345820422843 0.029253428970066733 1.4216516897156288 0.7356385225238835 0.05831727917967825 79.04308458802771 0.6177867189443496 18.527720781840415 0.5404184220501225 1.000001758303168e-14 13.999999236379308 1.392398260745562 TKPTQAAGPS(ph)SPQKPPTPEETK ddPTM_KYSE-520_SHP099_60min_R1 1 TKPTQAAGPSSPQKPPTPEETK 22 2 P18887;F5H8D7 P18887 XRCC1 DNA repair protein XRCC1 1 T(0.001)KPT(0.001)QAAGPS(0.444)S(0.444)PQKPPT(0.106)PEET(0.003)K 50.87 0.04663 3969700000.0 3579900.0 3385800.0 3142100.0 2585600.0 2639100.0 3635600.0 2743400.0 3078700.0 3943100.0 3745100.0 True False 3381315.8106462797 3223141.085810591 3344644.7935377546 2831334.646611013 2846782.1555750472 3612908.871842658 3020729.645003836 3068020.7082739826 3227132.4374619997 3711921.32764371 0.9109341260723067 0.8683214974969872 0.9010548711335165 0.762767956725073 0.7669295505737875 0.9733258204952571 0.8137913975998421 0.8265317169913002 0.8693967766581278 1.0 21.82373470289821 -8.044020651012667 19.69353027423282 1.0000000015777593 0.8516590567229941 0.33467801979239387 0.06178994932127253 632.1817566724151 282820.9206061749 0.06079293657715792 0.015696668738364675 9.036065055662808e-09 8.044020651012667 -0.14834094485476512 TKPTQAAGPSS(ph)PQKPPT(ph)PEETK ddPTM_KYSE-520_SHP099_60min_R1 8 TKPTQAAGPSSPQKPPTPEETK 22 2 P18887;F5H8D7 P18887 XRCC1 DNA repair protein XRCC1 2 TKPT(0.002)QAAGPS(0.459)S(0.54)PQKPPT(1)PEETK;TKPTQAAGPS(0.036)S(0.964)PQKPPT(0.994)PEET(0.006)K;T(0.001)KPT(0.022)QAAGPS(0.034)S(0.943)PQKPPT(1)PEETK;TKPTQAAGPS(0.002)S(0.998)PQKPPT(1)PEETK;T(0.001)KPT(0.023)QAAGPS(0.177)S(0.799)PQKPPT(1)PEETK;T(0.007)KPT(0.046)QAAGPS(0.037)S(0.91)PQKPPT(0.994)PEET(0.005)K;TKPTQAAGPS(0.038)S(0.962)PQKPPT(1)PEETK;TKPT(0.002)QAAGPS(0.113)S(0.885)PQKPPT(1)PEETK 191.48 3.1675e-13 97632370000.0 24021370.0 19768060.0 19750150.0 19697470.0 20396290.0 20992380.0 19874470.0 20307790.0 24458320.0 19991340.0 True False 22688856.720686067 18818372.725137018 21023276.27035732 21569511.62653969 22001361.983984623 20861358.769692004 21883575.383735295 20237347.016363796 20017305.632072657 19814232.280627184 1.1450787696109461 0.9497401897087964 1.0610189672053176 1.088586795645304 1.1103817534982592 1.0528471895471125 1.104437208255167 1.021354081740038 1.0102488629672532 1.0 24.240033734147318 -7.432793388256911 6.1584619274121595 1.008386824275159 1.0691001350101461 0.2580410041437643 0.04874904491525352 0.3459490446133867 19.14290455772935 0.027392161092733583 0.012793536836991089 3.691531781479295e-08 7.432793388256911 0.06071331073498709 TKPTQAAGPSS(ph)PQKPPTPEETK ddPTM_KYSE-520_SHP099_60min_R1 8 TKPTQAAGPSSPQKPPTPEETK 22 2 P18887;F5H8D7 P18887 XRCC1 DNA repair protein XRCC1 1 TKPT(0.001)QAAGPS(0.018)S(0.965)PQKPPT(0.011)PEET(0.005)K;T(0.001)KPT(0.029)QAAGPS(0.15)S(0.79)PQKPPT(0.029)PEET(0.001)K;TKPT(0.002)QAAGPS(0.181)S(0.813)PQKPPT(0.005)PEETK;TKPTQAAGPS(0.022)S(0.977)PQKPPT(0.001)PEETK;TKPT(0.005)QAAGPS(0.039)S(0.956)PQKPPTPEETK;TKPTQAAGPS(0.031)S(0.969)PQKPPTPEETK;TKPTQAAGPS(0.027)S(0.973)PQKPPTPEETK;TKPTQAAGPS(0.018)S(0.982)PQKPPTPEETK 252.91 9.285499999999999e-28 49556810000.0 39282890.0 38271750.0 32437491.0 27683523.0 27918914.0 39392810.0 30384564.0 37377790.0 40903530.0 37537390.0 True False 37103789.783200204 36433117.68293206 34528463.57168065 30314556.702565286 30115973.694909055 39146944.860769086 33456132.253888033 37248135.17053181 33476480.046080533 37204837.92824754 0.9972840052349585 0.9792575297114905 0.9280638082141767 0.8148014718147488 0.8094639130800699 1.0522003868493406 0.8992414459219207 1.0011637530142659 0.8997883584560309 1.0 25.148986898482256 -6.2675665855953095 24.98122572592386 0.9660991816615967 0.9060408337221093 0.17041964586284408 0.07105070802178115 1095.4653342691959 4466302.10129987 0.02643287703452083 0.02386507202463571 5.400493085974222e-07 6.2675665855953095 -0.06005834793948739 TKQDRT(ph)PLTK ddPTM_KYSE-520_SHP099_60min_R1 2 TKQDRTPLTK 10 2 O00203-3;O00203 O00203-3 AP3B1 AP-3 complex subunit beta-1 1 T(0.002)KQDRT(0.997)PLTK;T(0.002)KQDRT(0.997)PLT(0.002)K 90.73100000000001 0.0073 558960000.0 1171440.0 1078830.0 1029310.0 950590.0 1057840.0 1060500.0 855310.0 1079840.0 1391530.0 1098880.0 True False 1106457.8879922542 1027001.387443156 1095660.9695542292 1040933.7877946943 1141085.9897137317 1053881.026127498 941773.0818211826 1076094.2870765496 1138863.2296166713 1089144.7781157033 1.015896059205741 0.9429429476032932 1.0059828514715916 0.955735003013633 1.0476899055494626 0.9676225303588986 0.8646904440477748 0.9880176710191533 1.0456490748520912 1.0 20.05476431106176 -6.481933869041983 24.994755122776315 0.9653858023356463 0.9912356739097663 0.02693081806427422 0.05088936177967444 1754.367893572508 1070954.1376153703 0.018462482696107077 0.016280257621599164 3.2965990638115967e-07 6.481933869041983 0.025849871574119998 TKS(ph)DES(ph)GEEKNGDEDCQR ddPTM_KYSE-520_SHP099_60min_R1 3 TKSDESGEEKNGDEDCQR 18 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBM7;E5RHK4 Q6PKG0 LARP1 La-related protein 1 2 T(0.135)KS(0.88)DES(0.985)GEEKNGDEDCQR;T(0.235)KS(0.767)DES(0.998)GEEKNGDEDCQR;T(0.113)KS(0.887)DES(1)GEEKNGDEDCQR 90.1 0.0010697 11537400000.0 7685300.0 6973600.0 6299600.0 6229300.0 6111200.0 6169100.0 6446600.0 6568200.0 7769200.0 6260790.0 True False 7258981.088734266 6638577.788412991 6705682.295716379 6821330.799092666 6592116.67202843 6130596.358588546 7098285.240752972 6545416.447229402 6358509.125594025 6205324.27142091 1.1697988326196025 1.0698196416563535 1.0806336627079918 1.09927064255269 1.0623323429508627 0.987957452412837 1.143902386124229 1.0548065114622314 1.0246860353259246 1.0 22.56507517251576 -1.0000000000000002 0.6586013717047339 1.053518278616034 10.987580894660715 0.38483434962404783 0.04321666405865078 268.9635699300915 1.6788386433492735 0.017804161231614265 3902.832941818211 0.09999999999999995 1.0000000000000002 9.934062616044681 TKS(ph)LEITGER ddPTM_KYSE-520_SHP099_60min_R1 1 TKSLEITGER 10 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.009)KS(0.991)LEITGER 76.01 0.010533 397980000.0 536120.0 452820.0 430270.0 429740.0 425720.0 431240.0 455410.0 488210.0 517740.0 491210.0 True False 506380.3548712765 431065.8475033225 458005.89265634154 470582.36039395735 459221.741984544 428548.47119964386 501447.287173288 486516.51345907064 423731.4671632927 486858.2615555975 1.0400981042270958 0.8854031687292141 0.9407376413680081 0.9665695286557616 0.9432349787333382 0.8802325133199063 1.0299656527776195 0.9992980542315645 0.8703384549938546 1.0 18.893142297845582 -6.767443889908129 24.999991381488837 0.9748420209096726 0.9411260523442379 0.07076851216546831 0.05696590142151395 427.7434315890478 1780899.763375866 0.022908689126977185 0.01589754554002129 1.708268411111175e-07 6.767443889908129 -0.033715968565434795 TKS(ph)LIAQDHR ddPTM_KYSE-520_SHP099_60min_R1 2 TKSLIAQDHR 10 1 E9PB39;H0YAN8;O15013-7;O15013-4;O15013-5;O15013-6;O15013 E9PB39 ARHGEF10 Rho guanine nucleotide exchange factor 10 1 T(0.148)KS(0.852)LIAQDHR;T(0.183)KS(0.817)LIAQDHR 113.72 0.00040907 1137320000.0 1144560.0 1765930.0 1926990.0 2089120.0 2198700.0 1798000.0 2292700.0 2196400.0 2775000.0 2492600.0 True False 1081068.9751762059 1681092.0720850304 2051206.8586930153 2287669.336683171 2371725.18110828 1786778.0150657645 2524468.490595716 2188781.201043616 2271129.9520572824 2470517.503213454 0.4375880655652254 0.6804615105533147 0.8302741656454437 0.9259879088925909 0.9600114866716497 0.723240378884855 1.021837929628949 0.8859606127852251 0.9192932044007687 1.0 21.2363818464048 -4.369215680277813 1.3429279513627417 0.9141711422072359 0.29115710536123585 0.7952271717667835 0.07705488104069066 0.4555825992074562 0.8513966277769289 0.022171481223807167 0.3673832222076363 4.273506016505747e-05 4.369215680277813 -0.6230140368460001 down TKS(ph)PKPAES(ph)PQSATK ddPTM_KYSE-520_SHP099_60min_R1 2 TKSPKPAESPQSATK 15 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 2 T(0.035)KS(0.965)PKPAES(1)PQSATK;T(0.11)KS(0.89)PKPAES(0.981)PQS(0.019)AT(0.001)K 130.89 3.185e-05 1315330000.0 2761600.0 2414900.0 2394900.0 2238000.0 2422700.0 2338000.0 2405300.0 2464100.0 2836300.0 2319000.0 True False 2608408.5428868863 2298884.5791611974 2549279.0859754835 2450698.8471207633 2613352.706722618 2323407.6747629363 2648451.1974658184 2455552.612225263 2321299.417304528 2298455.4641546975 1.1348527668105939 1.0001866971160382 1.1091270314924424 1.0662372559922784 1.137003847792078 1.0108560774821953 1.152274315847942 1.0683490067658723 1.0099388278372545 1.0 21.132233281480353 -7.737095013831322 4.1118527112213 1.0017381138314922 1.0845118619508407 0.3088146753589178 0.04839079117218641 0.2401968791826984 8.586892918413142 0.038174094120244195 0.011574025844662621 1.8319135971752987e-08 7.737095013831322 0.08277374811934846 TKS(ph)PKPAESPQSATK ddPTM_KYSE-520_SHP099_60min_R1 3 TKSPKPAESPQSATK 15 2 Q5VUA4;Q5VUA4-2 Q5VUA4 ZNF318 Zinc finger protein 318 1 T(0.024)KS(0.976)PKPAESPQSATK;TKS(0.999)PKPAES(0.001)PQSATK;T(0.001)KS(0.999)PKPAESPQSATK 184.78 4.616700000000001e-11 4989000000.0 3737070.0 2998720.0 3015280.0 2995310.0 3127370.0 3267840.0 3059810.0 3558010.0 3928860.0 3251980.0 True False 3529767.277435652 2854656.9900295134 3209649.7734185816 3279983.3618272115 3373476.226698773 3247444.198416299 3369125.4556678487 3545668.0937557737 3215478.0625008144 3223169.987202159 1.0951229042994508 0.8856675264922872 0.9958053053865417 1.0176265523849608 1.0466330476187777 1.0075311607239217 1.0452832053677643 1.1000561893521341 0.9976135528898923 1.0 21.620048846218868 -5.34286815901405 3.0900829432461037 1.036738324160522 0.9808841282942781 0.0863982788705222 0.05497977252499292 0.46679120477243335 8.65210985428167 0.015484884404379794 0.025166224926177712 4.5407944293608545e-06 5.34286815901405 -0.05585419586624385 TKS(ph)PTDDEVTPSAVVR ddPTM_KYSE-520_SHP099_60min_R1 6 TKSPTDDEVTPSAVVR 16 1 A0A1B0GUN5;Q5VTI5;Q9Y2H5 A0A1B0GUN5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 T(0.246)KS(0.738)PT(0.016)DDEVTPSAVVR;TKS(0.976)PT(0.024)DDEVTPSAVVR;T(0.204)KS(0.768)PT(0.028)DDEVTPSAVVR;T(0.03)KS(0.893)PT(0.077)DDEVTPSAVVR;T(0.027)KS(0.959)PT(0.014)DDEVTPSAVVR;T(0.028)KS(0.859)PT(0.105)DDEVT(0.003)PS(0.006)AVVR 252.38 1.8237e-23 6351890000.0 3356410.0 3779960.0 3263320.0 2806850.0 3544060.0 3098890.0 3127730.0 3345790.0 4789050.0 2711100.0 True False 3170223.2464625435 3598365.0477643674 3473678.828696609 3073612.1800897745 3822957.3590569915 3079548.678035123 3443911.4721031743 3334184.2354032565 3919479.242126093 2687081.7632038803 1.1798015564225335 1.33913492958768 1.2927328361437158 1.1438476574025138 1.4227171690149003 1.1460569306842727 1.2816548864508335 1.2408197923340518 1.4586378783847618 1.0 21.357608790032938 -10.200061059133702 5.686208155531059 0.9999922040761173 1.2759757385556934 0.40118988902042074 0.10199155922136764 9.413648568584893e-06 1.3242559096005678e-06 0.09214352790679216 0.02234745664661951 6.308686419929403e-11 10.200061059133702 0.275983534479576 TKS(ph)RS(ph)PS(ph)PAPEKK ddPTM_KYSE-520_SHP099_60min_R1 1 TKSRSPSPAPEKK 13 3 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 3 T(0.515)KS(0.666)RS(0.825)PS(0.994)PAPEKK 66.893 0.022212 752590000.0 1667400.0 1495100.0 1408300.0 1411700.0 1330000.0 1514300.0 1392600.0 1411800.0 1816500.0 1375100.0 True False 1574905.998120508 1423273.1518091462 1499081.2713596697 1545867.5435569196 1434663.4333351562 1504848.6919989365 1533377.5984662615 1406902.7953165984 1486669.3902385745 1362917.6838116103 1.1555400717349558 1.0442840156191548 1.0999059511556537 1.1342339760635152 1.0526412932899203 1.1041376231838111 1.1250698532122159 1.032272757208621 1.090799105402223 1.0 20.378266999594228 -8.789511425503964 0.4526750432467816 0.9900941723415876 1.1015661511667045 0.3921266811808656 0.036838717569189265 3.2723360789173896 1.0136625617723234 0.09793627079429752 0.021134263320171244 1.6236356349974919e-09 8.789511425503964 0.11147197882511695 TKS(ph)VS(ph)SMSEFESLLDCSPYLAGGDAR ddPTM_KYSE-520_SHP099_60min_R1 1 TKSVSSMSEFESLLDCSPYLAGGDAR 26 1 O94964-2;H0YDM2;O94964-3;O94964;X6R3R3;O94964-4 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 2 T(0.143)KS(0.813)VS(0.51)S(0.45)MS(0.084)EFESLLDCSPYLAGGDAR 120.58 0.00017117 72325000.0 88100.0 80827.0 75014.0 60448.0 67172.0 68822.0 66166.0 81687.0 100060.0 72073.0 True False 83212.91737700407 76943.94959619964 79849.52246664373 66192.95974564608 72458.05424360099 68392.4563697753 72854.70499793086 81403.6468628891 81891.62630733385 71434.48929194556 1.1648843325094864 1.0771260543592251 1.1178007046471177 0.9266246655046713 1.0143287221872928 0.9574150672550094 1.0198813727103309 1.1395566437131033 1.146387789974266 1.0 16.12433316972541 -10.613338639782153 12.749281804854038 0.9999993275721812 1.0571985084987723 0.05109577575442381 0.07787182490703995 1.6068217627241098e-06 4.879825325982085e-08 0.08138557051129384 0.019738668149946976 2.4359106838138314e-11 10.613338639782153 0.05719918092659104 TKS(ph)VSS(ph)MSEFESLLDCSPYLAGGDAR ddPTM_KYSE-520_SHP099_60min_R1 1 TKSVSSMSEFESLLDCSPYLAGGDAR 26 1 O94964-2;H0YDM2;O94964-3;O94964;X6R3R3;O94964-4 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 2 T(0.17)KS(0.689)VS(0.411)S(0.566)MS(0.164)EFESLLDCSPYLAGGDAR 138.84 1.3644999999999998e-06 59001000.0 104780.0 99981.0 96163.0 86028.0 96425.0 85280.0 78013.0 95526.0 125760.0 95494.0 True False 98967.64452624833 95177.76268545953 102361.82084624002 94204.07525473861 104013.09891679896 84747.7358869902 85899.3153735088 95194.64260193605 102925.15415161214 94647.99745320785 1.0456390751972966 1.0055972154351558 1.0815001225656753 0.9953097560390677 1.0989466414038083 0.8953991438528622 0.9075661153420153 1.0057755595832703 1.0874520002654715 1.0 16.530284361496506 -6.248887506062496 24.8590997345286 0.9751200036410581 1.0424103020104398 0.24454702853107024 0.05779676997903188 1112.647721543456 2203609.5194284427 0.020030557543259178 0.01989675789405757 5.637836720303647e-07 6.248887506062496 0.06729029836938172 TKS(ph)VSSMSEFESLLDCSPYLAGGDAR ddPTM_KYSE-520_SHP099_60min_R1 2 TKSVSSMSEFESLLDCSPYLAGGDAR 26 1 O94964-2;H0YDM2;O94964-3;O94964;X6R3R3;O94964-4 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 T(0.052)KS(0.493)VS(0.131)S(0.131)MS(0.193)EFESLLDCSPYLAGGDAR;T(0.153)KS(0.731)VS(0.032)S(0.032)MS(0.051)EFESLLDCSPYLAGGDAR 224.71 4.8155e-22 247856000.0 352461.0 317521.0 263123.0 239838.0 277134.0 286243.0 236093.0 285198.0 415178.0 292235.0 True False 332909.28571641626 302266.81455126253 280084.32959168527 262632.13141007576 298942.86912323703 284456.4512605505 259959.58448563507 284208.7147037135 339792.14098567143 289646.0252553897 1.149365973252628 1.0435731485862605 0.9669883415273053 0.9067348021727729 1.0320972603012593 0.982083047781293 0.8975078606945178 0.9812277398010832 1.1731289621049223 1.0 18.143931341816 -4.373976667166163 2.7679854144165024 0.9867533242001695 1.1609163892624361 0.30112743688939103 0.07211695316490133 0.4182172744270981 4.964681125342149 0.018998718525701366 0.14474720608043562 4.2269132310000925e-05 4.373976667166163 0.17416306506226664 TKSDES(ph)GEEKNGDEDCQR ddPTM_KYSE-520_SHP099_60min_R1 6 TKSDESGEEKNGDEDCQR 18 2 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YBM7;E5RHK4 Q6PKG0 LARP1 La-related protein 1 1 T(0.001)KS(0.002)DES(0.997)GEEKNGDEDCQR;TKSDES(1)GEEKNGDEDCQR;T(0.001)KS(0.004)DES(0.995)GEEKNGDEDCQR;TKS(0.001)DES(0.999)GEEKNGDEDCQR;TKSDES(1)GEEKNGDEDCQR;T(0.001)KS(0.003)DES(0.996)GEEKNGDEDCQR 178.53 3.8054e-09 4760660000.0 2083160.0 1965510.0 1893492.0 1643964.0 1731970.0 1778534.0 1512440.0 1649910.0 2502750.0 1623090.0 True False 1967602.9621234946 1871083.9493093404 2015549.524014319 1800205.8442841994 1868266.1854387186 1767433.5095923108 1665332.195191951 1644186.8473018904 2048313.6891932832 1608710.6853449119 1.2230931142858887 1.1630953696986075 1.2528974553197425 1.119036418843846 1.1613438031202965 1.0986646173816943 1.0351968258574098 1.0220525432448235 1.2732641784834786 1.0 20.617473460737678 -5.7801994661116805 1.2926037519260694 1.0846740144403777 1.206724169757609 0.31255267540316733 0.07634171902001204 0.5502686711734905 1.9313454858131947 0.02998255425813997 0.04197389277187536 1.6588248546058126e-06 5.7801994661116805 0.12205015531723129 TLADLIR ddPTM_KYSE-520_SHP099_60min_R1 1 TLADLIR 7 0 Q16878 Q16878 CDO1 Cysteine dioxygenase type 1 0 91.09299999999999 0.054671000000000004 423790000.0 143390.0 188380.0 864880.0 147720.0 313170.0 142020.0 251970.0 123190.0 746340.0 222340.0 False True 135435.8708591218 179329.94203585509 920631.5486569271 161759.26438636245 337814.6973064448 141133.6005003559 277441.58659022243 122762.68264276216 610823.4697003354 220370.2405779025 0.6145833053680595 0.8137666028116016 4.1776582275476395 0.7340340690383708 1.532941546102387 0.6404385643462787 1.258979369730936 0.5570746863134846 2.771805612674842 1.0 17.749569885870844 TLAGNVIADLSDSSADSENLS(ph)PDIK ddPTM_KYSE-520_SHP099_60min_R1 2 TLAGNVIADLSDSSADSENLSPDIK 25 0 O75113 O75113 N4BP1 NEDD4-binding protein 1 1 TLAGNVIADLSDSSADSENLS(1)PDIK;TLAGNVIADLSDSSADS(0.002)ENLS(0.998)PDIK 143.05 9.1131e-07 34853000.0 87680.0 100261.0 71874.0 73747.0 70317.0 108303.0 71174.0 97660.0 109677.0 106364.0 True False 82816.21561425344 95444.31106517088 76507.11304246598 80755.89270715603 75850.54785099876 107627.04080404203 78368.96251130088 97321.24025401534 89762.42153217526 105421.69770993973 0.7855708778482807 0.9053573708116434 0.7257245396765458 0.7660272454476127 0.719496550508 1.0209192523172046 0.7433855099443331 0.9231613829800748 0.8514605957034589 1.0 16.685812304950126 -6.238000545394603 24.987915173831237 0.8927079735747554 0.7835354992329747 0.3427695849023845 0.08687348699986137 1057.4997058104834 1127390.8252403766 0.027892828633936634 0.02787750912125641 5.780953214230512e-07 6.238000545394603 -0.10917247434178068 TLAPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 TLAPSPK 7 0 O43683-2;O43683-3;O43683;A0A590UJ99 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 TLAPS(1)PK;TLAPS(1)PK 113.62 0.0028401 710450000.0 2101920.0 2077700.0 1724710.0 1566470.0 1736160.0 1978200.0 1607180.0 1877580.0 2364190.0 2100340.0 True False 1985322.307526361 1977884.1733087185 1835887.5662335705 1715346.8378236208 1872785.9146008769 1965853.3200239695 1769649.4389652505 1871067.1132104674 1934912.6923799256 2081732.6216397916 0.9536874653780043 0.9501144156307302 0.8819036350534932 0.8239995953334455 0.8996284609911496 0.9443351656157728 0.8500848862959588 0.8988028019355425 0.9294722445458845 1.0 20.98935334967818 -8.116493280049689 2.8190229499984887 0.999888784935674 0.8987358848353476 0.3625324108337832 0.03998579486718947 0.5414444878410728 8.915131853705885 0.04119894310984723 0.011053005411896933 7.647275211730747e-09 8.116493280049689 -0.1011529001003264 TLDAEVVEKPAKEET(ph)VVENATPDYAAGLVSTQK ddPTM_KYSE-520_SHP099_60min_R1 1 TLDAEVVEKPAKEETVVENATPDYAAGLVSTQK 33 2 H0Y3X6;A0A0C4DFX9;Q9H3P2;H7C2C7;Q9H3P2-7 H0Y3X6 NELFA Negative elongation factor A 1 T(0.326)LDAEVVEKPAKEET(0.545)VVENAT(0.125)PDY(0.005)AAGLVSTQK 85.866 0.0020543000000000002 165820000.0 60115.0 53968.0 59699.0 62205.0 65419.0 85993.0 91049.0 128510.0 170270.0 120320.0 True False 56780.30111371849 51375.296272380474 63547.293061777236 68116.94449738477 70567.10311680644 85456.28578951619 100253.12147260843 128064.22880445955 139353.26015740295 119254.05840754363 0.47612887873111365 0.4308054330260901 0.5328732112798052 0.5711918353721697 0.5917375396621519 0.7165901683402206 0.8406684251365213 1.0738773213638373 1.1685410292802907 1.0 16.863678838737265 -6.755821861195835 1.037465291381384 1.116574096399002 0.4934540830259014 0.9480174173216336 0.05731806291801921 0.10952471837957796 0.2333561566604851 0.04267390885195559 0.024353591900731688 1.7546000556793464e-07 6.755821861195835 -0.6231200133731007 down TLDFDPLLS(ph)PAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 TLDFDPLLSPASPK 14 0 Q53H80 Q53H80 AKIRIN2 Akirin-2 2 TLDFDPLLS(1)PAS(1)PK;TLDFDPLLS(1)PAS(1)PK;TLDFDPLLS(1)PAS(1)PK;TLDFDPLLS(1)PAS(1)PK 119.0 0.00043473 54861000.0 323606.0 300979.0 288403.0 251962.0 300238.0 297176.0 249978.0 277415.0 331374.0 287263.0 True False 305654.9300874325 286519.5170613108 306993.91884111555 275908.3927248621 323865.02247945947 295321.21435216017 275248.21579017595 276452.71211414784 271204.83485874906 284718.0733072323 1.0735353977954458 1.00632711416298 1.0782382560935846 0.9690582319554267 1.1374937274529273 1.0372408429214337 0.9667395279581088 0.9709700157173883 0.9525381782353471 1.0 18.119174549684637 -6.717793099669228 5.307318293694043 0.969909025480216 1.0505994765399538 0.43785494363750543 0.04328369251105667 0.176607772571465 11.448840922992181 0.01650945100853504 0.012347652322753994 1.9151681045633287e-07 6.717793099669228 0.08069045105973782 TLDFDPLLS(ph)PAS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 6 TLDFDPLLSPASPKR 15 1 Q53H80 Q53H80 AKIRIN2 Akirin-2 2 TLDFDPLLS(1)PAS(1)PKR;TLDFDPLLS(1)PAS(1)PKR;TLDFDPLLS(1)PAS(1)PKR;TLDFDPLLS(1)PAS(1)PKR;TLDFDPLLS(1)PAS(1)PKR;TLDFDPLLS(1)PAS(1)PKR 94.057 0.0012902 567279000.0 1124060.0 1103220.0 1035269.0 966001.0 1049945.0 948662.0 902886.0 919023.0 1210670.0 988724.0 True False 1061706.151041943 1050219.6552330195 1102004.096228968 1057809.4446012091 1132569.698130137 942741.0485696979 994158.5281981974 915835.1237145804 990842.8465070935 979964.674575633 1.0834126765862326 1.0716913399840764 1.1245345111099878 1.0794363021904705 1.1557250251092863 0.9620153389487692 1.0144840462016764 0.934559323897238 1.0111005755755138 1.0 19.90237021883496 -6.271790251784976 24.997267658193113 0.9822200714876027 1.1011145404469305 0.777300414467226 0.03170296978083582 314.45176016770637 759396.3891394621 0.01057177724991891 0.009423301929172904 5.348225966186963e-07 6.271790251784976 0.11889446895932776 TLDFDPLLSPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 TLDFDPLLSPASPK 14 0 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLSPAS(1)PK;TLDFDPLLS(0.012)PAS(0.988)PK;TLDFDPLLSPAS(1)PK;TLDFDPLLSPAS(1)PK;TLDFDPLLSPAS(1)PK;TLDFDPLLS(0.001)PAS(0.999)PK;TLDFDPLLSPAS(1)PK;TLDFDPLLSPAS(1)PK 290.63 8.577799999999998e-33 4258581000.0 6331740.0 6372690.0 5052450.0 4093000.0 4488080.0 6457250.0 4709750.0 5818270.0 6763600.0 6202990.0 True False 5980505.760189239 6066536.406797297 5378139.011205827 4481997.489394681 4841266.3623179365 6416947.907554729 5185857.492730485 5798087.779364431 5535500.736480938 6148036.334453196 0.9727505556001472 0.9867437465847138 0.8747734591396419 0.7290128498879972 0.7874492112526718 1.0437394248297736 0.8434981855375963 0.9430796215162757 0.9003689040450772 1.0 22.551694260602133 -8.463503454513473 0.683470715629204 1.0007999663300688 0.8878788550250153 0.10711509961278598 0.08984471061504286 3.9717289780790574 3.2661783116425194 0.11082862429175071 0.037468658582254497 3.4395097547665288e-09 8.463503454513473 -0.11292111130505356 TLDFDPLLSPAS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 6 TLDFDPLLSPASPKR 15 1 Q53H80 Q53H80 AKIRIN2 Akirin-2 1 TLDFDPLLSPAS(1)PKR;TLDFDPLLS(0.001)PAS(0.999)PKR;TLDFDPLLS(0.023)PAS(0.977)PKR;TLDFDPLLS(0.028)PAS(0.972)PKR;TLDFDPLLS(0.004)PAS(0.996)PKR;TLDFDPLLS(0.007)PAS(0.993)PKR 191.47 2.8210000000000002e-11 1870754000.0 3666030.0 3846730.0 3653980.0 2651340.0 2919910.0 3620830.0 2942440.0 3137110.0 4237540.0 3451330.0 True False 3462668.0078503755 3661927.316740552 3889521.3973747147 2903322.5564455646 3149690.304984708 3598231.0568913072 3239890.5506470357 3126228.0976169785 3468109.5556903817 3420753.9012941057 1.0122528856987967 1.0705030009189518 1.1370363111778574 0.8487376292539515 0.920759106287403 1.05188246822727 0.9471276344730185 0.9139003236784425 1.013843630896207 1.0 21.705882885603696 -5.248385588723269 24.996854013058748 0.9551009095708164 1.072987955353915 0.436424110326583 0.060732200953235546 753.0491623669142 1442020.284334524 0.01683848811379878 0.0289430918077493 5.644356176392803e-06 5.248385588723269 0.11788704578309861 TLDGFKK ddPTM_KYSE-520_SHP099_60min_R1 1 TLDGFKK 7 1 H7BZ94;P07237;H0Y3Z3;I3L0S0 H7BZ94 P4HB Protein disulfide-isomerase 0 78.49600000000001 0.04191 1447000000.0 3253700.0 3465900.0 2059100.0 2255500.0 4026400.0 3871600.0 2770300.0 3409100.0 3669300.0 3261900.0 False True 3073210.7749098516 3299392.961578037 2191832.880676488 2469862.0418591946 4343254.772917807 3847435.9083029036 3050348.959522534 3397274.627789922 3003047.615525688 3233002.103719797 0.9505749381894636 1.0205353586939683 0.6779559092011198 0.763953119305875 1.3434122940781839 1.190050542768332 0.9435035492284067 1.0508111404818197 0.9288727687713132 1.0 21.62444301555252 -5.724550785572714 24.999924315933985 1.0777164490300666 0.8526820407578576 0.36615321291792424 0.14363310652717137 204.8133222069362 138803.97778356017 0.04562181267615508 0.05889589858770147 1.8855984582914637e-06 5.724550785572714 -0.225034408272209 TLDRS(ph)GDLGDMEPLK ddPTM_KYSE-520_SHP099_60min_R1 2 TLDRSGDLGDMEPLK 15 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12;O60716-27;O60716-29;O60716-31;O60716-32;O60716-26;O60716-25;O60716-30;O60716-28;H0YC95 O60716-5 CTNND1 Catenin delta-1 1 T(0.018)LDRS(0.982)GDLGDMEPLK;T(0.004)LDRS(0.996)GDLGDMEPLK 124.69 5.9018e-05 277870000.0 439770.0 433360.0 380320.0 371110.0 400650.0 332970.0 294630.0 318120.0 561890.0 353590.0 True False 415375.0814402392 412540.7351133786 404836.0357335153 406380.1828217099 432178.8756133313 330891.81072104955 324414.0757117009 317016.5159697665 459864.94009422185 350457.467688857 1.1852367825958765 1.1771492210850543 1.1551645293885895 1.159570619229898 1.2331849524091985 0.9441710941506368 0.9256874389097682 0.9045791435416636 1.3121847370720003 1.0 18.41887984056236 -6.259971290137151 24.995739291400593 1.005633362091472 1.179044595538769 0.36195955823909487 0.1087699477018227 146.31953275022354 2491259.9944117377 0.03677003732421518 0.03490279728178618 5.495772035032445e-07 6.259971290137151 0.17341123344729703 TLDS(ph)DEERPR ddPTM_KYSE-520_SHP099_60min_R1 2 TLDSDEERPR 10 1 Q9BW71;Q9BW71-2 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 T(0.198)LDS(0.802)DEERPR;TLDS(1)DEERPR 158.02 0.00013678 1624980000.0 2234710.0 1932170.0 1801000.0 2025230.0 2166930.0 2124250.0 2206320.0 2221000.0 2243070.0 2226230.0 True False 2110746.1815160615 1839345.652953703 1917095.3417018843 2217707.250292398 2337455.06285485 2110991.7677994706 2429356.357208156 2213295.8693852974 1835785.031193196 2206507.334180731 0.9566005735937311 0.8336005162822838 0.8688370584608529 1.0050758571875882 1.0593461560927644 0.9567118745078974 1.1009962756866014 1.0030765976162446 0.8319868249496742 1.0 21.07333311200113 -5.263484685206607 24.420331721575657 0.9996546566448917 0.8810714905960148 0.31576564514609395 0.07206859254182713 143.65843610697033 1715249.4971143831 0.020160503559247697 0.03167063439193805 5.451491192786049e-06 5.263484685206607 -0.11858316604887698 TLDS(ph)DEERPRPAPPDWSHMR ddPTM_KYSE-520_SHP099_60min_R1 16 TLDSDEERPRPAPPDWSHMR 20 2 Q9BW71;Q9BW71-2 Q9BW71 HIRIP3 HIRA-interacting protein 3 1 T(0.01)LDS(0.989)DEERPRPAPPDWS(0.001)HMR;T(0.001)LDS(0.999)DEERPRPAPPDWSHMR;T(0.001)LDS(0.999)DEERPRPAPPDWSHMR;TLDS(1)DEERPRPAPPDWSHMR;T(0.009)LDS(0.991)DEERPRPAPPDWSHMR;T(0.022)LDS(0.978)DEERPRPAPPDWSHMR;T(0.026)LDS(0.974)DEERPRPAPPDWSHMR;T(0.001)LDS(0.998)DEERPRPAPPDWSHMR;TLDS(1)DEERPRPAPPDWSHMR;TLDS(1)DEERPRPAPPDWSHMR;T(0.041)LDS(0.959)DEERPRPAPPDWSHMR;TLDS(1)DEERPRPAPPDWSHMR;T(0.004)LDS(0.996)DEERPRPAPPDWSHMR;TLDS(1)DEERPRPAPPDWSHMR;T(0.024)LDS(0.976)DEERPRPAPPDWSHMR;T(0.001)LDS(0.972)DEERPRPAPPDWS(0.027)HMR 261.82 1.8735e-35 60162820000.0 10078880.0 10294610.0 9531780.0 8951480.0 9464180.0 8832230.0 8649700.0 9073790.0 11338950.0 8735810.0 True False 9519784.434650848 9800041.483075364 10146213.790187223 9802225.96783941 10208957.122181913 8777104.776420638 9524096.08893697 9042315.140328515 9280082.511668425 8658417.519757327 1.0994831807230363 1.131851341277203 1.1718323547039569 1.1321036373531386 1.1790788673434223 1.013707730817148 1.0999811532770605 1.0443380813751688 1.0717989159673282 1.0 23.045671940116993 -6.260450291472092 24.99998932682641 1.0521123043673686 1.1432686382477135 0.6752266272300917 0.033467106238546734 56.71170215163084 1433438.4430390175 0.010985146622490602 0.010396962728696014 5.489713862414911e-07 6.260450291472092 0.09115633388034494 TLDSGTS(ph)EIVKSPR ddPTM_KYSE-520_SHP099_60min_R1 1 TLDSGTSEIVKSPR 14 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 TLDSGT(0.037)S(0.499)EIVKS(0.463)PR 177.74 1.5988e-08 2416400000.0 758150.0 695650.0 682740.0 703030.0 662220.0 641880.0 677170.0 632050.0 871470.0 610890.0 True False 716093.9081654449 662229.9298080624 726750.5128226237 769845.7598263231 714332.9464836149 637873.7888267027 745624.9521423223 629857.5660715784 713233.0159709393 605477.9898652288 1.182691889964221 1.0937308058967854 1.2002922071277744 1.2714677869589948 1.179783507312323 1.053504503059946 1.2314649989313209 1.0402650081661535 1.1779668756079726 1.0 19.207714990938694 -7.269080333867106 24.982680392160823 1.0818369579386335 1.170676381421561 0.2858989503430298 0.07230140014056771 899.1829485254443 2939923.450138981 0.038702892198195074 0.01911794565711548 5.381702249673604e-08 7.269080333867106 0.0888394234829275 TLDSGTSEIVKS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 10 TLDSGTSEIVKSPR 14 1 Q9H501 Q9H501 ESF1 ESF1 homolog 1 TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR;TLDSGTS(0.003)EIVKS(0.997)PR;TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR;TLDSGT(0.001)S(0.003)EIVKS(0.996)PR;TLDSGTS(0.012)EIVKS(0.987)PR;TLDSGTSEIVKS(1)PR;TLDSGTSEIVKS(1)PR 265.43 1.4577e-24 42216950000.0 12747670.0 12089100.0 11794610.0 10476570.0 11361710.0 11483680.0 11563300.0 11312890.0 14333400.0 11264190.0 True False 12040531.333249869 11508321.489890963 12554909.432643233 11472260.062904378 12255811.937713077 11412006.0934652 12732231.21093274 11273648.225038378 11730815.875610016 11164398.040007202 1.0784756410603666 1.0308053733529854 1.1245487116863073 1.0275753356154058 1.0977584186621467 1.0221783613026607 1.140431500678072 1.009785586705139 1.050734292486982 1.0 23.41240213049881 TLDT(ph)MYEAGR ddPTM_KYSE-520_SHP099_60min_R1 1 TLDTMYEAGR 10 0 Q7Z403-3;Q7Z403 Q7Z403-3 TMC6 Transmembrane channel-like protein 6 1 TLDT(1)MYEAGR 76.843 0.033298 0.0 147100.0 150680.0 127940.0 160350.0 172760.0 202110.0 179920.0 161250.0 192270.0 159920.0 True False 138940.06976342015 143441.106624709 136187.21711123775 175589.6157890145 186355.22913006134 200848.55652110226 198108.0694499853 160690.66138603303 157358.6147322714 158503.23321587744 0.8765756189603228 0.9049727485958965 0.8592078177090191 1.1077983220056202 1.1757187872391863 1.2671574733592441 1.2498676868008558 1.0138005271297927 0.9927785795886758 1.0 17.274152743804255 -5.294518536687903 5.901790402054482 1.1313984713398768 0.8822968771209267 0.5701634352435418 0.09285149554191323 0.13983957287487517 15.133286418440957 0.028794591979889476 0.044222256338284034 5.075530750333268e-06 5.294518536687903 -0.24910159421895006 TLEGELHDLR ddPTM_KYSE-520_SHP099_60min_R1 10 TLEGELHDLR 10 0 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q3BDU5;Q5TCI8;H0YAB0 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ;;;;;;;;; 233.09 3.1121999999999996e-13 8660567000.0 8188410.0 7520440.0 5180915.0 4904969.0 7865580.0 7599770.0 5517687.0 6169003.0 6332180.0 6754001.0 False True 7734182.574109357 7159146.773989419 5514885.070657096 5371135.779027297 8484556.396971693 7552337.016438451 6075468.649395743 6147604.168449131 5182415.733267777 6694165.805673261 1.1553616684478727 1.0694606291230626 0.8238345494793791 0.8023607324568052 1.2674553698357887 1.1281968860164615 0.9075766608957944 0.9183525396456534 0.7741690127955471 1.0 22.674472854447828 -6.891852736657681 8.083809654784714 0.8903894741606315 1.0317700877069333 0.18791621456521368 0.14273722546422987 0.4735471139540236 32.22685915951093 0.0651962646580444 0.043896292275961625 1.2827654772163576e-07 6.891852736657681 0.14138061354630183 TLENSPISSCDTS(ph)DTEGPVPVNSAAVLK ddPTM_KYSE-520_SHP099_60min_R1 1 TLENSPISSCDTSDTEGPVPVNSAAVLK 28 0 Q8N556;Q8N556-2 Q8N556 AFAP1 Actin filament-associated protein 1 1 TLENSPISSCDT(0.006)S(0.949)DT(0.044)EGPVPVNSAAVLK 160.52 3.7824000000000003e-10 371770000.0 76272.0 74112.0 66006.0 61076.0 60628.0 80481.0 59747.0 84855.0 86503.0 85807.0 True False 72041.04011553746 70551.54827562011 70260.85237333401 66880.64467683094 65399.07867386765 79978.68822608878 65786.80983452802 84560.65781030587 70796.23576317511 85046.81673683575 0.8470750920455652 0.8295613049684268 0.8261432357985293 0.7863979775255172 0.7689773842592487 0.940407781205621 0.7735364162787556 0.9942836317080012 0.83243839663327 1.0 16.375969617038027 -7.873461399402739 0.5213897008151177 0.9976543714087373 0.8142850706742071 0.39095410351575655 0.06448466414979488 0.8954088050181616 0.6118013441222026 0.06749281645256706 0.03383232938283578 1.3382541554496539e-08 7.873461399402739 -0.18336930073453017 TLEPVKPPTVPNDYMT(ph)SPAR ddPTM_KYSE-520_SHP099_60min_R1 3 TLEPVKPPTVPNDYMTSPAR 20 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 TLEPVKPPTVPNDY(0.005)MT(0.497)S(0.497)PAR;TLEPVKPPTVPNDY(0.037)MT(0.481)S(0.481)PAR;TLEPVKPPT(0.001)VPNDY(0.301)MT(0.349)S(0.349)PAR 110.57 0.00031726 3113290000.0 2106830.0 2005960.0 1677140.0 1389900.0 1501950.0 1653620.0 1379600.0 1672540.0 2065020.0 1643760.0 True False 1989959.940038519 1909590.6705926543 1785251.1279188802 1521995.6781113262 1620144.9200734901 1643299.1442008044 1519063.4315984887 1666738.349113769 1690064.4229179544 1629197.5652259279 1.221435621138166 1.172105035848027 1.0957855364038134 0.9341995781219231 0.9944434945486906 1.0086555364897818 0.9323997678500296 1.0230424993807519 1.0373600224989201 1.0 20.63573013272664 -4.924749964297823 2.5659591417628276 0.9897457418855045 1.204456453678166 0.8527353826464652 0.034573543322306506 0.09736224343929742 1.2806845502738036 0.009778681905048638 0.025177963097944442 1.189186679028781e-05 4.924749964297823 0.21471071179266144 TLEPVKPPTVPNDYMTS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 6 TLEPVKPPTVPNDYMTSPAR 20 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 TLEPVKPPT(0.002)VPNDY(0.188)MT(0.328)S(0.483)PAR;TLEPVKPPTVPNDYMT(0.164)S(0.836)PAR;TLEPVKPPTVPNDYMT(0.116)S(0.884)PAR;TLEPVKPPTVPNDYMT(0.21)S(0.79)PAR;TLEPVKPPTVPNDYMT(0.289)S(0.711)PAR;TLEPVKPPTVPNDYMT(0.065)S(0.935)PAR 185.71 4.8412e-13 18005810000.0 5839930.0 5439460.0 4160420.0 3639640.0 4095350.0 5233740.0 4199910.0 4607250.0 5344550.0 4808240.0 True False 5515977.441288169 5178140.176804085 4428607.330107359 3985550.291302327 4417630.745645968 5201074.287302726 4624477.8899715915 4591268.525090235 4374114.44514152 4765642.734354117 1.1574466968589796 1.0865565182795587 0.9292780799917777 0.8363090801103631 0.9269748052661538 1.0913689038856629 0.9703786346876342 0.9634101381526422 0.9178435499601797 1.0 22.184239370475723 -4.6231706592541695 3.9734602291079537 0.953627797054802 1.1434449684379608 0.5496948274950304 0.061967280708761764 0.16812605350818152 4.788858490471978 0.01767251835412285 0.0542515762700381 2.381383503073399e-05 4.6231706592541695 0.1898171713831588 TLEPVRPPVVPNDYVPS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 TLEPVRPPVVPNDYVPSPTR 20 1 H7C3Q7;H0Y6B5;B7Z836;E7EW77;E7EP65;A0A0C4DG21;F8WAL6;Q9NYB9-3;Q9NYB9-2;Q9NYB9-4;Q9NYB9 H7C3Q7 ABI2 Abl interactor 2 1 TLEPVRPPVVPNDYVPS(0.987)PT(0.013)R;TLEPVRPPVVPNDYVPS(0.995)PT(0.005)R 182.03 3.1078e-10 1078810000.0 490810.0 454110.0 399090.0 235421.0 324400.0 383380.0 274872.0 312660.0 444670.0 333820.0 True False 463583.7908945223 432293.87396699324 424815.9799665774 257795.3410580953 349928.4344164848 380987.18321240996 302658.74425220344 311575.4554353922 363929.13721849065 330862.6145080301 1.4011368180229107 1.3065660942375867 1.2839648885633375 0.7791612885651018 1.0576245821450823 1.151496622786807 0.914756551453346 0.9417064418072238 1.099940341581439 1.0 18.33587275940559 -5.105731566680207 6.694503804182874 0.9962999430489563 1.3398324174831429 0.7075130518950273 0.10024135805434037 0.13210114558818245 7.199449948365017 0.02757878922029942 0.048364682205562955 7.839140229132912e-06 5.105731566680207 0.34353247443418655 TLFEDRDS(ph)DS(ph)QDEVVVESLPTTSIK ddPTM_KYSE-520_SHP099_60min_R1 4 TLFEDRDSDSQDEVVVESLPTTSIK 25 1 E7ESJ3;Q9UPS8 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 2 TLFEDRDS(1)DS(1)QDEVVVESLPTTSIK;T(0.005)LFEDRDS(0.996)DS(0.999)QDEVVVESLPTTSIK;TLFEDRDS(1)DS(1)QDEVVVESLPTTSIK;TLFEDRDS(1)DS(1)QDEVVVESLPTTSIK 160.53 1.3498e-11 1576080000.0 1081400.0 1061231.0 950754.0 955846.0 1024409.0 978202.0 925168.0 1035156.0 1173100.0 993155.0 True False 1021412.586282544 1010247.8698197928 1012041.1241001851 1046689.3164544202 1105024.1602101028 972096.6784723919 1018693.0102095611 1031565.2854432255 960094.6114444676 984356.4193628969 1.0376450706174405 1.026302922343569 1.028124675364241 1.0633235034235535 1.1225854156823658 0.9875454249605647 1.034882274520938 1.0479591184165624 0.9753526187860568 1.0 19.90882126087895 -7.756458737218457 24.995012878608254 0.9876762992223634 1.0435956524852044 0.31735857997195405 0.03277607236646478 139.2835163261382 699013.1014513404 0.024588437773585305 0.008639033729323996 1.7520288884327275e-08 7.756458737218457 0.05591935326284092 TLFEDRDS(ph)DSQDEVVVESLPTTSIK ddPTM_KYSE-520_SHP099_60min_R1 4 TLFEDRDSDSQDEVVVESLPTTSIK 25 1 E7ESJ3;Q9UPS8 E7ESJ3 ANKRD26 Ankyrin repeat domain-containing protein 26 1 T(0.011)LFEDRDS(0.922)DS(0.066)QDEVVVESLPTTSIK;T(0.048)LFEDRDS(0.947)DS(0.005)QDEVVVESLPTTSIK;TLFEDRDS(0.996)DS(0.004)QDEVVVESLPTTSIK;T(0.007)LFEDRDS(0.959)DS(0.034)QDEVVVESLPTTSIK 149.07 5.528e-07 463083000.0 529175.0 491781.0 496960.0 484371.0 504870.0 481947.0 490142.0 542998.0 654640.0 541824.0 True False 499820.6078657901 468155.1025816694 528994.8367641137 530405.4742085484 544600.396682648 478938.9900038381 539690.3366849422 541114.4666746863 535773.8781314514 537023.8608926934 0.9307232774255869 0.8717584760637197 0.9850490365265465 0.9876758051809035 1.0141083783081075 0.8918393108412335 1.004965283642735 1.0076171769634092 0.997672388785176 1.0 19.034626665490684 -4.774128900832842 24.97236754834737 0.9847495889195919 0.9012408830635266 0.47796401214308704 0.035457738253529096 166.43380932256363 327535.0683061964 0.009349253411452908 0.019668646638659547 1.6821747088754437e-05 4.774128900832842 -0.08350870585606529 TLGT(ph)PTQPGSTPR ddPTM_KYSE-520_SHP099_60min_R1 2 TLGTPTQPGSTPR 13 0 Q8NFH5-2;Q8NFH5;Q8NFH5-3 Q8NFH5-2 NUP35 Nucleoporin NUP53 1 TLGT(0.995)PT(0.005)QPGSTPR;TLGT(0.999)PT(0.001)QPGSTPR 166.23 3.9708e-06 1135310000.0 1000420.0 1130850.0 857920.0 761550.0 777440.0 1111700.0 872840.0 1053140.0 1226190.0 1223370.0 True False 944924.7083121731 1076522.268559544 913222.8959205345 833927.4830316426 838620.1049714931 1104761.467935823 961075.1852974962 1049486.903144723 1003544.8057344551 1212531.8935674587 0.7792988484055926 0.8878300639105228 0.7531537114736749 0.6877571529917431 0.6916272548544199 0.9111195126467492 0.7926184790652083 0.865533441810729 0.8276440488355891 1.0 20.209591264736485 -8.38538897064628 0.5223552325256396 1.00682665896441 0.7746316374965322 0.47226951984847876 0.06825417321374454 1.5251994988639899 0.8260180356519201 0.1032267979695742 0.03741213236837423 4.117285941309571e-09 8.38538897064628 -0.23219502146787774 TLHCEGTEINS(ph)DDEQESK ddPTM_KYSE-520_SHP099_60min_R1 10 TLHCEGTEINSDDEQESK 18 0 Q9BPX3;H0Y9Z8 Q9BPX3 NCAPG Condensin complex subunit 3 1 TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGT(0.001)EINS(0.999)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK;TLHCEGTEINS(1)DDEQESK 349.37 9.404599999999999e-60 27894310000.0 9203920.0 8383090.0 7844360.0 8847850.0 8523450.0 8831540.0 8409610.0 8663470.0 9151740.0 7890600.0 True False 8693360.210040359 7980353.773125382 8350019.997019768 9688747.003796905 9194197.023203425 8776419.082966577 9259735.448684374 8633418.44463911 7490014.712591232 7820695.422793908 1.1115840395347727 1.0204148533730313 1.0676825455551062 1.2388600348197225 1.1756239728255315 1.1222044343252586 1.1840041004149444 1.103919533738198 0.9577172243226751 1.0 22.898865468213373 -7.688120496011536 5.09643794099069 0.9791409655447855 1.1308783348802232 0.512499113710362 0.058537796563531225 0.17132122474591566 7.850580525203968 0.04828336159455834 0.016636780326987073 2.0505931580622156e-08 7.688120496011536 0.1517373693354377 TLHCEGTEINS(ph)DDEQESKEVEETATAK ddPTM_KYSE-520_SHP099_60min_R1 9 TLHCEGTEINSDDEQESKEVEETATAK 27 1 Q9BPX3;H0Y9Z8 Q9BPX3 NCAPG Condensin complex subunit 3 1 T(0.001)LHCEGT(0.251)EINS(0.748)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGT(0.132)EINS(0.868)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK;TLHCEGTEINS(0.999)DDEQES(0.001)KEVEETATAK;TLHCEGTEINS(1)DDEQESKEVEETATAK 413.21 2.7762999999999994e-124 30737030000.0 6521560.0 6661130.0 6638690.0 5872030.0 5944500.0 5203900.0 4741840.0 4818710.0 8050190.0 4979210.0 True False 6159796.066392456 6341119.316240029 7066630.57967957 6430105.96570981 6412298.33042169 5171420.529811313 5221191.463098703 4801995.019705366 6588478.424775491 4935098.073166764 1.248160821744283 1.2849023914475213 1.4319128971524246 1.3029337756572132 1.2993254106310055 1.0478860709839763 1.0579711660620268 0.973029299217961 1.335024821613683 1.0 22.234647324373718 -6.230278743101798 6.7670284366761075 1.079460309597116 1.31871928156901 0.5611057070752898 0.10194508467097027 0.15147305572460212 24.48274784209591 0.033449143582046016 0.032882546422771185 5.884658392622295e-07 6.230278743101798 0.23925897197189405 TLHPDLGTDK ddPTM_KYSE-520_SHP099_60min_R1 5 TLHPDLGTDK 10 0 P00338;P00338-3;P00338-5;P00338-2;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 ;;;; 155.0 3.8528e-05 3073420000.0 9235940.0 8472000.0 5288630.0 6153530.0 8432350.0 9347950.0 6821310.0 8710760.0 7163010.0 7817780.0 False True 8723603.996810067 8064992.403268745 5629543.551907185 6738359.641073742 9095927.971491512 9289605.976604013 7510874.584370161 8680544.406666676 5862387.948787685 7748520.551340802 1.125841241435507 1.040842874434034 0.726531408751707 0.8696317698877031 1.1738922173882027 1.1988876992778372 0.9693301494916319 1.1202841044494096 0.7565815835350993 1.0 22.885489447840854 -4.5206291045274485 24.96636088667131 0.9848272506653435 1.104591731505212 0.08193495458955402 0.1526174092244717 218.14748883576289 2420934.009033395 0.041310653547140135 0.11336900443010209 3.0155802858052913e-05 4.5206291045274485 0.11976448083986857 TLHPDLGTDKDK ddPTM_KYSE-520_SHP099_60min_R1 4 TLHPDLGTDKDK 12 1 P00338;P00338-3;P00338-5;P00338-2;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 ;;; 163.99 3.1686e-06 4834490000.0 9952600.0 8816700.0 5557280.0 6439270.0 9089800.0 10136000.0 7193160.0 9715800.0 7893780.0 8612900.0 False True 9400509.43798377 8393132.497863498 5915511.160762383 7051256.284762884 9805115.546112726 10072737.464241717 7920314.8112764405 9682098.157484764 6460468.538000251 8536596.406734806 1.1012011099139458 0.983194249553824 0.6929589825864836 0.8260032393238027 1.1485977641366696 1.1799477197135615 0.9278071064748756 1.1341871743926226 0.756796764211949 1.0 23.025229542461794 -4.281722864494959 5.668718225513587 0.963884346538218 1.1043058606256917 0.06695170797621619 0.15744776209081845 0.43402777557386607 51.72726524934174 0.041622516228740004 0.2152435842815257 5.22729651062025e-05 4.281722864494959 0.14042151408747372 TLHPDLGTDKDKEQWK ddPTM_KYSE-520_SHP099_60min_R1 6 TLHPDLGTDKDKEQWK 16 2 P00338;P00338-3;P00338-5;P00338-2;P00338-4 P00338 LDHA L-lactate dehydrogenase A chain 0 ;;;;; 220.61 6.9569e-18 48877970000.0 32130390.0 29070860.0 20090290.0 17097210.0 23241460.0 24778050.0 19843070.0 22174230.0 22128930.0 18940080.0 False True 30348053.216355454 27674252.24934951 21385342.23900053 18722123.697936352 25070430.67618176 24623400.998999026 21849001.165300794 22097312.771634202 18110874.136929344 18772285.626359258 1.616641352065408 1.4742079254585005 1.139197573734555 0.9973278731518729 1.3355023024462673 1.3116890233346905 1.1638966932519577 1.1771242570806657 0.964766597813684 1.0 24.16210098092608 -4.6609807755668475 3.6515964047546636 1.1511678487712687 1.5882237000001547 0.6552037926072247 0.12009463736566482 0.14248322475135786 3.5376480106985873 0.032775114984852846 0.1007579176356104 2.182826534470687e-05 4.6609807755668475 0.437055851228886 TLHS(ph)PPLQLQQR ddPTM_KYSE-520_SHP099_60min_R1 5 TLHSPPLQLQQR 12 0 A0A2R8YGT1;F8W9A8;B7WPL9;Q6PFW1-7;Q6PFW1-4;Q6PFW1-3;Q6PFW1-2;Q6PFW1 A0A2R8YGT1 PPIP5K1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 1 T(0.023)LHS(0.977)PPLQLQQR;TLHS(1)PPLQLQQR;T(0.009)LHS(0.991)PPLQLQQR;TLHS(1)PPLQLQQR;TLHS(1)PPLQLQQR 214.89 6.9083e-11 5160020000.0 1804520.0 1872190.0 1503550.0 1480251.0 1580080.0 1564240.0 1473720.0 1571740.0 2021320.0 1505750.0 True False 1704419.6783785613 1782247.1821855176 1600471.2387650604 1620933.6099863069 1704423.3065746003 1554476.997934635 1622697.999721168 1566288.0007868754 1654299.241330601 1492410.226455775 1.1420584288183773 1.194207296755167 1.0724070435820534 1.086117999764551 1.1420608599167272 1.041588278060958 1.0873002415527564 1.0495023238393024 1.1084748764147008 1.0 20.509212720417345 -1.0000000000189604 0.11388712758350918 0.9792351187459458 1.5378968858104154 0.5220171259713611 0.03721837336163679 82.17502994346991 0.6508575594799227 0.30284552281458527 7.239281476407208 0.0999999999956342 1.0000000000189604 0.5586617670644696 TLHTEDTDHQHTAS(ph)HGEEEALKEDPPR ddPTM_KYSE-520_SHP099_60min_R1 1 TLHTEDTDHQHTASHGEEEALKEDPPR 27 1 Q6PJI9;B7Z7V6;Q6PJI9-2 Q6PJI9 WDR59 WD repeat-containing protein 59 1 TLHTEDTDHQHT(0.136)AS(0.864)HGEEEALKEDPPR 167.16 1.7797e-10 651920000.0 139130.0 166840.0 149360.0 213580.0 128260.0 126330.0 129620.0 164480.0 192910.0 110890.0 True False 131412.18155122123 158824.75596805447 158987.9845844495 233878.57898483134 138353.33230042647 125541.52761026577 142723.25456929253 163909.45726992062 157882.40686535861 109907.60087111444 1.1956605413061887 1.4450752696740583 1.4465604136959576 2.1279563663580845 1.2588149609658894 1.1422460923106201 1.298574925101496 1.4913386878686639 1.4365012575472635 1.0 16.745931636519007 TLIPS(ph)PPPRPK ddPTM_KYSE-520_SHP099_60min_R1 2 TLIPSPPPRPK 11 1 J3KSG3;J3KSS7;Q9NZ52-3;Q9NZ52-4;Q9NZ52-2;Q9NZ52 J3KSG3 GGA3 ADP-ribosylation factor-binding protein GGA3 1 TLIPS(1)PPPRPK;TLIPS(1)PPPRPK 106.32 0.00049189 2583000000.0 3067500.0 2739400.0 2604800.0 2070230.0 2330100.0 2860900.0 2505000.0 2908000.0 3307300.0 2830800.0 True False 2897339.660090352 2607795.1120767687 2772709.5758273597 2266984.0367626557 2513465.6135445475 2843044.0619030287 2758229.8464440517 2897912.826732302 2706777.690248304 2805721.3143290747 1.0326541147523718 0.9294562146135189 0.9882341348967479 0.8079861763835778 0.8958358054693634 1.0133023716159346 0.983073348146703 1.0328583997036331 0.9647350492098212 1.0 21.419940285907607 -6.270299669397693 24.551893787145385 0.9998649566423441 0.9271208809956327 0.2589220442623622 0.05730148448569816 736.8100757291471 2041695.550029153 0.02086703709282384 0.01867918163731563 5.366613645739846e-07 6.270299669397693 -0.07274407564671137 TLKPTYRT(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 2 TLKPTYRTPER 11 2 H0Y9P1;Q9NSY1;Q5H9B9 H0Y9P1 BMP2K;BMP2KL BMP-2-inducible protein kinase;Putative BMP-2-inducible kinase-like protein 1 TLKPT(0.004)YRT(0.996)PER;T(0.008)LKPT(0.044)Y(0.005)RT(0.942)PER 81.904 0.018249 2191830000.0 1808520.0 1717690.0 1738140.0 1507030.0 1540880.0 1571180.0 1418620.0 1539500.0 1925310.0 1547630.0 True False 1708197.7904047593 1635169.5940947447 1850183.2855223294 1650257.6780949098 1662138.4895920886 1561373.682820371 1562027.9539969896 1534159.8338219994 1575722.237115459 1533919.2022379192 1.113616537241711 1.0660076434985009 1.206180405606107 1.0758439399462878 1.0835893358444846 1.0178982573152464 1.0183247929343742 1.000156873702167 1.0272524359930766 1.0 20.54879106155183 -6.052469295733807 1.6673014307840486 1.010471680932133 1.1211039409929673 0.6628031097207057 0.03524635308125296 0.22587850525890407 1.265269421776312 0.013827972198230405 0.014711206275087377 8.861978749128391e-07 6.052469295733807 0.11063226006083426 TLLIS(ph)SLSPALPAEHLEDR ddPTM_KYSE-520_SHP099_60min_R1 1 TLLISSLSPALPAEHLEDR 19 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 T(0.039)LLIS(0.429)S(0.429)LS(0.103)PALPAEHLEDR 55.843999999999994 0.040574 13672000.0 39635.0 45814.0 47824.0 28125.0 46445.0 40290.0 38066.0 40570.0 60227.0 42799.0 True False 37436.36753958636 43613.02667178403 50906.811561105475 30797.99154391042 50099.957264098804 40038.53516518334 41914.08276835896 40429.27213910918 49291.29499911846 42419.83415711814 0.8825203653773469 1.0281281749062583 1.2000709708706676 0.7260280987860122 1.18105028601796 0.9438635478131587 0.988077478405834 0.9530747336107882 1.1619869803486083 1.0 15.372451360126288 -7.743721092845201 24.978625428143364 1.0809936011635108 0.9925219851052005 0.07073165240143853 0.13419018255156873 596.4887406921947 840916.1138811244 0.08586955543154859 0.032307778804316914 1.8041760241870844e-08 7.743721092845201 -0.08847161605831033 TLLISSLS(ph)PALPAEHLEDR ddPTM_KYSE-520_SHP099_60min_R1 5 TLLISSLSPALPAEHLEDR 19 0 Q8NDT2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 T(0.002)LLIS(0.037)S(0.043)LS(0.918)PALPAEHLEDR;TLLISSLS(1)PALPAEHLEDR;TLLISSLS(1)PALPAEHLEDR;TLLIS(0.001)SLS(0.999)PALPAEHLEDR;T(0.001)LLIS(0.134)S(0.029)LS(0.836)PALPAEHLEDR 243.52 2.244e-26 743395000.0 363375.0 354442.0 331045.0 267954.0 288172.0 317689.0 278651.0 360954.0 418120.0 366284.0 True False 343217.8643798965 337414.0742917113 352384.69039072783 293420.2675966923 310849.4969256086 315706.1851102487 306819.76245168934 359701.9348212966 342199.94794745574 363039.0087246395 0.9454021637664368 0.9294154792815547 0.9706524145398578 0.8082334419859765 0.8562426886786264 0.8696205573591896 0.8451426846099843 0.9908079467408584 0.9425982875768871 1.0 18.46976504929681 -7.273103843916194 24.944486030193044 0.9750273453859082 0.8887804947359915 0.41373208304095543 0.048272592882597776 838.4372477478278 1792989.3125479314 0.028315478776901555 0.013780439612261946 5.3320738531731915e-08 7.273103843916194 -0.08624685064991666 TLLPWDS(ph)DES(ph)PEASPGPPGPR ddPTM_KYSE-520_SHP099_60min_R1 2 TLLPWDSDESPEASPGPPGPR 21 0 A0A669KBI7;Q9UMN6 A0A669KBI7 KMT2B Histone-lysine N-methyltransferase 2B 2 TLLPWDS(1)DES(1)PEASPGPPGPR;TLLPWDS(1)DES(1)PEAS(0.001)PGPPGPR 93.37100000000001 0.0019725000000000003 111611000.0 144469.0 138063.0 127367.0 119739.0 124817.0 127390.0 111468.0 131120.0 159500.0 122087.0 True False 136455.01657818843 131430.246243212 135577.28061440535 131118.95855915683 134639.3877884168 126594.9117570787 122736.27326284439 130665.17532363797 130538.82066779693 121005.40416224861 1.127677044863421 1.0861518719195826 1.1204233526018244 1.0835793613262725 1.1126725183933703 1.046192214583536 1.01430406445546 1.0798292541417174 1.0787850474245395 1.0 16.88471195486209 -6.265983289535037 24.57365941099629 1.0469665626863993 1.104537058302021 0.5793056879897676 0.026451707637259573 240.98353111739854 1303241.7357279253 0.009094625520970186 0.008284816759271365 5.420217455161015e-07 6.265983289535037 0.057570495615621775 TLLPWDS(ph)DESPEASPGPPGPR ddPTM_KYSE-520_SHP099_60min_R1 4 TLLPWDSDESPEASPGPPGPR 21 0 A0A669KBI7;Q9UMN6 A0A669KBI7 KMT2B Histone-lysine N-methyltransferase 2B 1 TLLPWDS(1)DESPEASPGPPGPR;TLLPWDS(1)DESPEASPGPPGPR;TLLPWDS(1)DESPEASPGPPGPR;TLLPWDS(1)DESPEASPGPPGPR 351.96 7.029799999999999e-66 311135000.0 134469.0 135133.0 125270.0 108152.0 113598.0 122071.0 102713.0 116184.0 147954.0 119843.0 True False 127009.7365126942 128641.0078412316 133345.10463908676 118430.73356291545 122537.5163157949 121309.1096090617 113096.23242227848 115780.98482154934 121089.2832168226 118781.28425644303 1.0692739795478752 1.0830073832465215 1.1226103966951657 0.9970487716501637 1.0316230968781441 1.0212813438450559 0.9521384882327859 0.9747409749467248 1.019430661781672 1.0 16.8579480105964 -5.273382204892837 24.769363720628604 0.9986905747729894 1.0907682653915336 0.7387381712300851 0.0251123344342476 341.2462123699634 707743.0881957938 0.007657398496146179 0.011456819635140699 5.328657356333755e-06 5.273382204892837 0.0920776906185442 TLLRCRNEKK ddPTM_KYSE-520_SHP099_60min_R1 2 TLLRCRNEKK 10 3 P51681;P41597-2;P41597 P51681 CCR5;CCR2 C-C chemokine receptor type 5;C-C chemokine receptor type 2 0 ; 51.092 0.037707 6494700000.0 20781300.0 18264700.0 13634800.0 7823600.0 17911400.0 17558600.0 10897400.0 13556800.0 16339900.0 12482300.0 False True 19628519.862505525 17387236.396126382 14513721.024451356 8567152.59174889 19320925.278074674 17449010.264368046 11999015.540375002 13509774.624980904 13372986.055358838 12371716.53308246 1.5865639832611818 1.405402099994146 1.17313721064018 0.6924788948114019 1.5617012583831642 1.4103952525673138 0.9698747549128821 1.0919886976762871 1.0809321422454956 1.0 23.560542347384292 -4.630469301398598 3.0404237900541666 1.1299680865856152 1.55852451966085 0.3209661045230344 0.224727605557624 0.3233950974823976 5.696502857745506 0.062050039722695766 0.2207983247257705 2.3416969948454746e-05 4.630469301398598 0.4285564330752347 TLLSESSSQSSKS(ph)PSLSSK ddPTM_KYSE-520_SHP099_60min_R1 2 TLLSESSSQSSKSPSLSSK 19 1 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 TLLSESSSQS(0.001)S(0.008)KS(0.991)PSLSSK;TLLSESSSQS(0.001)S(0.006)KS(0.959)PS(0.029)LS(0.003)S(0.001)K 302.66 1.4058e-44 3873900000.0 1680550.0 1733760.0 1167770.0 1208640.0 1081270.0 1347860.0 1120950.0 1221280.0 1499400.0 1144040.0 True False 1587326.5414066329 1650467.5671731827 1243046.3226980614 1323508.7822091328 1166359.7974152663 1339447.5057767194 1234266.5654177465 1217043.664728895 1227146.7567980855 1133904.6956496527 1.3998765041688086 1.4555611009508815 1.0962529103787488 1.1672134239208256 1.0286224246977114 1.1812699170535705 1.0885099692709121 1.0733209496337865 1.0822309507193735 1.0 20.112867956613425 -4.764378061826576 24.99996861512323 1.0961141936979097 1.4277188767182465 0.8652584176644802 0.05331059813346082 21.21581527762117 180494.17510114107 0.013100146570385277 0.029314475981357342 1.7203703070004828e-05 4.764378061826576 0.33160468302033674 TLLTGDGGGEATGS(ph)PLAQGK ddPTM_KYSE-520_SHP099_60min_R1 6 TLLTGDGGGEATGSPLAQGK 20 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1;H0Y7E2 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 TLLTGDGGGEAT(0.002)GS(0.998)PLAQGK;TLLTGDGGGEATGS(1)PLAQGK;TLLTGDGGGEAT(0.001)GS(0.999)PLAQGK;TLLTGDGGGEATGS(1)PLAQGK;TLLTGDGGGEAT(0.001)GS(0.999)PLAQGK;TLLTGDGGGEAT(0.017)GS(0.983)PLAQGK 432.38 6.291499999999998e-124 3058580000.0 3131680.0 3509980.0 2574660.0 2127740.0 2253350.0 3305600.0 2630530.0 3363940.0 3759730.0 3471610.0 True False 2957959.4675506963 3341355.292212606 2740626.703201655 2329959.7698716396 2430675.825192312 3284968.524249941 2896449.643898792 3352271.277289497 3077057.8070804765 3440854.236271707 0.859658463985314 0.9710830691372409 0.7964960195963504 0.6771457347162249 0.7064163891540024 0.9546956362235578 0.8417821404248739 0.974255532812633 0.8942714790541615 1.0 21.714335346298178 -6.284019754968568 24.749231718319564 0.925690760717561 0.8042846483004732 0.3666141217737129 0.08569752417584306 963.7313001361879 1056294.4023592977 0.03355867729763058 0.029618360006631834 5.199723437555888e-07 6.284019754968568 -0.12140611241708776 TLMLPLTEGS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 10 TLMLPLTEGSLR 12 0 Q7L4E1;Q7L4E1-3 Q7L4E1 FAM73B Protein FAM73B 1 TLMLPLT(0.003)EGS(0.997)LR;TLMLPLTEGS(1)LR;TLMLPLTEGS(1)LR;TLMLPLT(0.002)EGS(0.998)LR;TLMLPLT(0.001)EGS(0.999)LR;TLMLPLTEGS(1)LR;TLMLPLTEGS(1)LR;TLMLPLT(0.001)EGS(0.999)LR;TLMLPLTEGS(1)LR;TLMLPLTEGS(1)LR 247.69 1.4098e-15 3450667000.0 2050196.0 2359418.0 1940676.0 2190781.0 2092612.0 2361045.0 2205771.0 2163792.0 2749692.0 2125907.0 True False 1936467.5409156007 2246068.017721379 2065775.0801513887 2398992.1675576745 2257288.65906643 2346308.8423698265 2428751.8589304336 2156286.310584847 2250417.246894515 2107073.117910617 0.9190319616605476 1.0659658645109527 0.9804002825491981 1.1385424393513812 1.0712910908876134 1.1135393558133553 1.152666150161317 1.0233561864825222 1.0680299737894425 1.0 21.00680894755949 -3.157516331587078 0.9181241421212601 1.0815560949985905 8.738913032205501e-17 0.4093132496106754 0.05355145060030506 13.020969753091554 1.8251339465783603 0.017344078561583477 22.497039782503528 0.000695798788786357 3.157516331587078 -1.0815560949985905 TLMNAVS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 2 TLMNAVSPLK 10 0 E7EQI7;Q12768 E7EQI7 KIAA0196 WASH complex subunit strumpellin 1 TLMNAVS(1)PLK;TLMNAVS(1)PLK 154.74 0.00011633 1567280000.0 2140700.0 2355300.0 1473750.0 1406680.0 1602520.0 2182700.0 1465260.0 1973430.0 2153400.0 2141000.0 True False 2021951.103620348 2242147.8526226254 1568750.2830833734 1540370.4442662352 1728629.206908464 2169076.959668543 1613382.7803595252 1966584.6319320265 1762396.842796448 2122032.405672795 0.9528370529192196 1.0566039644958898 0.7392678259246459 0.7258939308129262 0.8146101832787036 1.0221695737868963 0.7603007268157145 0.9267458058957004 0.8305230580292086 1.0 21.01701525721986 -9.014694448524413 14.630981890144014 0.9999994802582437 0.8686014228496235 0.11045683634910963 0.11072091376846419 0.0 0.0 0.11144347115346097 0.027029011932423207 9.66730791228595e-10 9.014694448524413 -0.1313980574086202 TLNAET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 TLNAETPK 8 0 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 TLNAET(1)PK;TLNAET(1)PK;TLNAET(1)PK 145.41 0.0024376 1586160000.0 3204850.0 3202530.0 2307620.0 2134660.0 2182870.0 3491380.0 2605770.0 3439180.0 3408190.0 3556260.0 True False 3027070.581789916 3048675.651704469 2456372.8775225477 2337537.444591068 2354649.450168658 3469589.0023583453 2869186.6614644756 3427250.2872906444 2789348.609478237 3524754.3031284166 0.8588032871123021 0.8649328121959022 0.6968919437426828 0.6631774142431355 0.6680322222966789 0.9843491784034113 0.8140104003612144 0.9723373581667147 0.7913597288192639 1.0 21.749091265697416 -6.261677929340717 24.9999993517455 0.9045323595589544 0.7489175117589899 0.4397656017281729 0.09122471399981873 23.28656636318504 2440310.6661088103 0.032373277396141806 0.030343441079138864 5.474217777076442e-07 6.261677929340717 -0.15561484779996448 TLNAET(ph)PKS(ph)SPLPAK ddPTM_KYSE-520_SHP099_60min_R1 1 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 2 TLNAET(0.999)PKS(0.863)S(0.138)PLPAK 178.14 2.0743e-08 1992800000.0 4965100.0 4049300.0 4135400.0 3717300.0 4016000.0 3766600.0 3721300.0 4042200.0 5200600.0 3537900.0 True False 4689676.005318534 3854765.5498767802 4401974.5008739475 4070591.0743530034 4332036.352085709 3743091.252250667 4097485.3203881173 4028178.5516565735 4256302.136457327 3506556.9584445492 1.3374019190034194 1.0993021347032932 1.2553551968614223 1.16085126310301 1.2354102338629425 1.0674548557485974 1.1685209648514292 1.1487560588331087 1.2138123483798626 1.0 21.741623731813394 -13.999999999999998 0.11285578899714285 0.4510522362420324 1.276437002559774 0.4108567578644837 0.07136236793735304 167.6427091286106 1.2470494605770306 21.514422222435556 0.7897065149754333 1.0000000000000041e-14 13.999999999999998 0.8253847663177416 TLNAET(ph)PKSS(ph)PLPAK ddPTM_KYSE-520_SHP099_60min_R1 6 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 2 T(0.001)LNAET(0.999)PKS(0.03)S(0.97)PLPAK;T(0.004)LNAET(0.996)PKS(0.039)S(0.961)PLPAK;TLNAET(1)PKS(0.078)S(0.922)PLPAK;TLNAET(1)PKS(0.032)S(0.968)PLPAK;TLNAET(0.992)PKS(0.484)S(0.524)PLPAK;TLNAET(1)PKS(0.036)S(0.964)PLPAK 250.26 6.3134e-19 16486220000.0 16737400.0 13848560.0 13334110.0 12872580.0 13289820.0 13572520.0 12882980.0 13710010.0 17006190.0 12653980.0 True False 15808943.056820305 13183254.390487652 14193648.065930335 14095986.132917706 14335653.225267839 13487808.868209345 14185317.344168367 13662453.175250376 13918294.587162882 12541875.58184746 1.260492735209513 1.0511389867053453 1.1317005956009942 1.1239137273311495 1.1430230775065742 1.075421995712586 1.1310363630699343 1.0893468912277195 1.109745866663483 1.0 23.580249777127637 -13.99999999998433 0.0952364260672934 0.6261793899798211 1.2076293659234 0.4246364997912655 0.0491625505558509 203.06912277320913 1.3270219353862855 15.338303341049656 0.9248968415728105 1.0000000000360798e-14 13.99999999998433 0.581449975943579 TLNAETPKSS(ph)PLPAK ddPTM_KYSE-520_SHP099_60min_R1 3 TLNAETPKSSPLPAK 15 1 Q7L2J0 Q7L2J0 MEPCE 7SK snRNA methylphosphate capping enzyme 1 TLNAET(0.007)PKS(0.252)S(0.741)PLPAK;TLNAETPKS(0.042)S(0.958)PLPAK;TLNAETPKS(0.111)S(0.889)PLPAK 200.99 1.1762000000000001e-11 10373600000.0 3141180.0 3623990.0 3154300.0 2121520.0 2123480.0 2879860.0 2089160.0 2312040.0 3829050.0 2645120.0 True False 2966932.483612916 3449888.080680114 3357631.225058448 2323148.622941756 2290585.7950515356 2861885.725510176 2300352.681036749 2304020.0728741908 3133791.042495472 2621686.294672219 1.1316885966266463 1.315904228393368 1.280714337135535 0.8861276147580471 0.8737070486680483 1.0916202031212083 0.8774324699761055 0.8788313375083859 1.1953341057104925 1.0 21.322063635434166 -5.255675664373499 24.976834558309772 0.9637812231521565 1.2500825903442339 0.5625270089836528 0.10925901262485213 322.5105491208106 1397582.3751996881 0.02947497475445455 0.04932554997340841 5.55040067899673e-06 5.255675664373499 0.2863013671920773 TLNDELEIIEGMK ddPTM_KYSE-520_SHP099_60min_R1 1 TLNDELEIIEGMK 13 0 P10809;E7EXB4;E7ESH4 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 196.57 1.1765999999999998e-07 168110000.0 55314.0 72944.0 71137.0 52724.0 67443.0 63587.0 61827.0 54798.0 68245.0 71834.0 False True 52245.622154274715 69439.66074882387 75722.60484322443 57734.87310795139 72750.38040182173 63190.129946600005 68077.07653337174 54607.918527949376 55853.428316450176 71197.60664600624 0.7338114947323918 0.9753089186561724 1.063555481853715 0.8109103076316677 1.021809353276942 0.8875316590455165 0.9561708565830065 0.7669909298982391 0.7844846329477455 1.0 16.119541124421282 -7.247529364542 24.653992245343343 0.8318033306689783 0.9271696145879506 0.07266319547847266 0.1085913617427451 1255.5565427851834 2225342.6041803863 0.04951732344856649 0.02840133328587452 5.655495165296366e-08 7.247529364542 0.09536628391897228 TLNDELEIIEGMKFDR ddPTM_KYSE-520_SHP099_60min_R1 3 TLNDELEIIEGMKFDR 16 1 P10809;E7EXB4;E7ESH4 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 ;; 117.67 0.00018224 111351000.0 174926.0 158719.0 111139.0 79704.0 182406.0 108732.0 66518.0 74622.0 167243.0 75878.0 False True 165222.50607366406 151093.90099792398 118303.19776868723 87279.04419611857 196760.31445182892 108053.36325591238 73242.28859311983 74363.1536989058 136875.8870529426 75205.77995219077 2.1969389344635215 2.0090729873950672 1.5730599143296433 1.1605363876500305 2.6162924522146014 1.4367693989026271 0.9738917492735377 0.988795724825663 1.8200181839741074 1.0 16.198555924270416 -1.0000000000009737 0.15773317611374177 0.9252106831976428 5.605672468723308 0.3129260609117417 0.4498999025379977 83.7562742482593 0.8571187779041355 1.4686731323991342 90.78558461345962 0.09999999999977581 1.0000000000009737 4.680461785525665 TLNEWDSR ddPTM_KYSE-520_SHP099_60min_R1 1 TLNEWDSR 8 0 O15371-2;O15371;O15371-3 O15371-2 EIF3D Eukaryotic translation initiation factor 3 subunit D 0 90.709 0.052000000000000005 0.0 282680.0 288500.0 182300.0 167040.0 269650.0 271360.0 200650.0 220530.0 225160.0 233860.0 False True 266999.1768913906 274640.02695267135 194051.34969031284 182915.4313775927 290869.92090137216 269666.3415841191 220933.6601552889 219765.03290208918 184276.61982169977 231788.18234032704 1.1519102233579983 1.1848750189922381 0.8371925942513909 0.789149082281615 1.2548953875236717 1.1634171287825916 0.9531705107851409 0.9481287211589388 0.7950216355341724 1.0 17.82244748722803 -6.9797478952815295 20.04002955056079 0.9130747909697482 1.0552928707582532 0.17811118505651202 0.14791214630219499 48.36694840553739 47858.61493654578 0.06764622447956603 0.0455840314055626 1.047736574849787e-07 6.9797478952815295 0.14221807978850498 TLNMTT(ph)SPEEK ddPTM_KYSE-520_SHP099_60min_R1 6 TLNMTTSPEEK 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 TLNMT(0.033)T(0.484)S(0.484)PEEK;TLNMT(0.007)T(0.73)S(0.263)PEEK;TLNMT(0.022)T(0.489)S(0.489)PEEK;TLNMT(0.004)T(0.776)S(0.22)PEEK;TLNMT(0.002)T(0.499)S(0.499)PEEK;TLNMT(0.159)T(0.556)S(0.286)PEEK 256.13 6.262399999999999e-15 17360300000.0 16745250.0 15529720.0 12734910.0 12114990.0 12579940.0 15000850.0 12815950.0 13999120.0 16600340.0 14030840.0 True False 15816357.601671727 14783648.940615036 13555822.675176429 13266395.007095423 13569909.707932534 14907224.130867217 14111511.297618609 13950560.320139175 13586136.716516968 13906537.673428336 1.1373325246795645 1.0630718650309792 0.9747805667745733 0.953968221180168 0.9757935459277539 1.0719579870229614 1.0147393714383648 1.0031656079855846 0.9769604077998819 1.0 23.729259939365676 -4.480965189230804 3.0935721568986265 0.9978612168088485 1.134975811558256 0.6758600050541979 0.03074647066584291 0.17492510182725876 3.067512232122087 0.008882826288852964 0.044430835041281404 3.303960227888071e-05 4.480965189230804 0.13711459474940746 TLNMTTS(ph)PEEK ddPTM_KYSE-520_SHP099_60min_R1 3 TLNMTTSPEEK 11 0 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 TLNMT(0.001)T(0.264)S(0.735)PEEK;TLNMT(0.004)T(0.068)S(0.928)PEEK;TLNMTT(0.09)S(0.91)PEEK 249.39 1.4078e-14 9121700000.0 6756200.0 6473700.0 5494900.0 4722200.0 5106100.0 5763500.0 5336600.0 5712700.0 6841900.0 5464700.0 True False 6381420.117849206 6162693.734778189 5849110.046150855 5170996.468218804 5507921.020265143 5727527.858638229 5876075.6081969375 5692883.977054204 5599583.430263321 5416287.0094722705 1.1781909095084995 1.1378078236992548 1.079911392420978 0.9547124181520495 1.016918233954851 1.0574638767520341 1.0848899989828025 1.0510676349126638 1.033841711207418 1.0 22.36887275878572 -4.804538401310014 2.889689352939615 1.0329122935625825 1.1664780438578042 0.6903208207817404 0.03446114471882445 0.15666266401766227 2.613021861189256 0.010162247670826045 0.02865812758901791 1.5684172085169517e-05 4.804538401310014 0.13356575029522166 TLNPS(ph)PAGWFVQQHPELELMSSFR ddPTM_KYSE-520_SHP099_60min_R1 3 TLNPSPAGWFVQQHPELELMSSFR 24 0 Q8N1F8 Q8N1F8 STK11IP Serine/threonine-protein kinase 11-interacting protein 1 TLNPS(1)PAGWFVQQHPELELMSSFR;T(0.003)LNPS(0.997)PAGWFVQQHPELELMSSFR;T(0.004)LNPS(0.996)PAGWFVQQHPELELMSSFR 242.9 1.0843999999999999e-28 1399230000.0 206354.0 238093.0 242980.0 221267.0 224720.0 260580.0 189607.0 221468.0 281378.0 200397.0 True False 194907.13226349966 226654.65489512114 258642.87958174554 242296.14915365056 242404.18551810246 258953.62356275687 208774.32594599482 220699.77919902006 230286.84816215275 198621.63848650697 0.981298582313026 1.1411377764387869 1.302188832760616 1.2198879789732 1.2204319094597027 1.3037533349134487 1.051115716982556 1.1111567746633655 1.159424773236864 1.0 17.59966327774939 -8.109637197589903 0.7401205428183335 1.0053787454467145 1.1888584663945383 0.21564908254826154 0.0966324610083667 1.2927583268602618 1.5771376794244036 0.10068211835996169 0.03807495671070602 7.768958515341363e-09 8.109637197589903 0.18347972094782383 TLNQSS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 TLNQSSSPK 9 0 Q14586 Q14586 ZNF267 Zinc finger protein 267 1 TLNQS(0.178)S(0.411)S(0.411)PK 57.885 0.045239 9061100000.0 1791300.0 1870500.0 1364700.0 1441000.0 1569200.0 1611500.0 1652900.0 1515200.0 2007500.0 1731900.0 True False 1691933.0181319786 1780638.372322258 1452670.7455972026 1577952.2067475528 1692687.1124733319 1601442.0307444283 1819991.2627494496 1509944.124850339 1642988.6049567515 1716556.7133978128 0.9856551810530668 1.0373315128036753 0.8462701722926095 0.919254338893411 0.9860944874479373 0.9329386079965151 1.0602569950321623 0.8796354428986517 0.9571420461282412 1.0 20.71108609267593 -5.774528404629041 24.941241913479253 0.9660516812252493 0.9463667988714985 0.027408375405023278 0.06296431193709806 1274.0962356154641 2427793.927136501 0.02011167896369157 0.022953869096564414 1.6806280021934767e-06 5.774528404629041 -0.019684882353750766 TLNQSSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 TLNQSSSPK 9 0 Q14586 Q14586 ZNF267 Zinc finger protein 267 1 TLNQS(0.001)S(0.105)S(0.894)PK;TLNQS(0.001)S(0.056)S(0.942)PK 107.09 0.0013552 8738500000.0 2813600.0 2425900.0 2126600.0 2056190.0 2398100.0 2373600.0 2296400.0 2353800.0 2706900.0 2474800.0 True False 2657523.999227457 2309356.122649866 2263684.0386803066 2251609.6793839317 2586816.826677472 2358785.4819577876 2528542.52270424 2345635.217181049 2215395.1953959833 2452875.1973652663 1.0834322113420254 0.9414894508821485 0.9228696352394212 0.917947102160957 1.0546059699474633 0.9616410506704359 1.0308484204252426 0.9562798872525564 0.903183006528677 1.0 21.226042400560626 -8.957154776891217 0.0016916228558510847 3.4602567366145304e-06 1.9400546325571866 0.004889724804098661 0.05865329732941694 1470780.8205831584 775.0484948594523 447073.2279073975 441792.50250866835 1.1036852107835172e-09 8.957154776891217 1.9400511723004499 TLPGACGS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 1 TLPGACGSPQK 11 0 Q9UBZ9-2;Q9UBZ9 Q9UBZ9-2 REV1 DNA repair protein REV1 1 TLPGACGS(1)PQK 105.03 0.00092956 346170000.0 986710.0 980480.0 883200.0 782300.0 752890.0 945190.0 834780.0 916230.0 1005800.0 890060.0 True False 931975.2293423795 933376.2690695154 940132.485169964 856649.5567929293 812138.1596418857 939290.7186095708 919167.7090676901 913051.8119796907 823172.0741546712 882174.7608562015 1.056451930723844 1.0580400964584613 1.0656986879306218 0.971065592447353 0.9206091532857489 1.064744493140945 1.0419338093232058 1.0350010593065724 0.9331167821620006 1.0 19.750704959749655 -5.24856645230088 24.646548485448804 0.998404216028383 1.0598612315006821 0.31846971942609903 0.04329973597256693 878.6006945688088 1682167.9624935593 0.01256642849448475 0.02157395526743129 5.642006052333607e-06 5.24856645230088 0.06145701547229909 TLPIRS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 TLPIRSPK 8 1 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 TLPIRS(1)PK;T(0.003)LPIRS(0.997)PK;TLPIRS(1)PK 115.23 0.0015914999999999998 1620530000.0 1525120.0 1579750.0 1348060.0 1328320.0 1550470.0 1390580.0 1483470.0 1315710.0 1552600.0 1372910.0 True False 1440518.5533486537 1503856.4387469073 1434958.104572261 1454563.1334260302 1672483.168032454 1381900.8744105406 1633433.6248719976 1311146.109099022 1270686.9778609483 1360747.0855078166 1.0586232876707335 1.1051696930041073 1.054536967122549 1.0689445150515993 1.2290918612611255 1.0155457168551123 1.2003947260062786 0.9635487175118336 0.9338156894796811 1.0 20.37596751537952 -7.296616018332142 21.725810898704836 0.9615112099548383 1.1027003165684466 0.49764139974145993 0.0638557533086648 103.95177830910615 64200.989451270114 0.03313679825313865 0.015921319573149753 5.051076913947069e-08 7.296616018332142 0.14118910661360828 TLPQQES(ph)LEIELAEEKPVKR ddPTM_KYSE-520_SHP099_60min_R1 1 TLPQQESLEIELAEEKPVKR 20 2 Q5VZK9-2;Q5VZK9;A0A0U1RQQ1 Q5VZK9-2 LRRC16A Leucine-rich repeat-containing protein 16A 1 TLPQQES(1)LEIELAEEKPVKR 208.11 8.273000000000001e-19 848240000.0 688910.0 867900.0 648550.0 511670.0 544990.0 515130.0 520840.0 630740.0 805250.0 610790.0 True False 650694.7889919626 826204.7812555406 690356.5707166889 560298.9629608049 587877.6124310734 511914.88259222865 573491.5901085511 628552.1101558224 659036.8987005851 605378.87578743 1.0748554583203604 1.3647730608057265 1.140371093753026 0.9255343808156692 0.9710903963512234 0.8456107457108896 0.9473267288400138 1.0382788949122983 1.0886354398199987 1.0 19.20747880878885 -5.100352267438572 4.428059469772472 0.969768652357697 1.227084102437664 0.5642085409970669 0.08977981022703088 0.15030407612338909 4.928886118251414 0.02490787195059982 0.045659424254721304 7.936841958704794e-06 5.100352267438572 0.2573154500799669 TLPS(ph)GSPRPGQLERPTSLALDSR ddPTM_KYSE-520_SHP099_60min_R1 1 TLPSGSPRPGQLERPTSLALDSR 23 2 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 T(0.003)LPS(0.499)GS(0.499)PRPGQLERPTSLALDSR 126.99 4.8568e-05 2841600000.0 1421100.0 1384700.0 1249000.0 1345100.0 1134200.0 1272100.0 1116900.0 1300900.0 1570300.0 1214700.0 True False 1342268.750107383 1318176.9335229262 1329512.538470658 1472937.8995809385 1223455.0872847633 1264160.3520384652 1229807.1518935573 1296387.4815323413 1285173.1040416388 1203938.7030222996 1.1148979152658083 1.094887082053139 1.1043025156788506 1.2234326348038804 1.0162104467723074 1.0500205275110672 1.0214865165529765 1.0767886091525787 1.067473867909897 1.0 20.199330510344602 -5.797759843047561 24.999999482391885 1.0422117496708043 1.1294109649687267 0.5821810732327517 0.03956668229775303 135.35319414869033 93165.17762758964 0.01240834230389999 0.014070126431243597 1.5930894330134997e-06 5.797759843047561 0.0871992152979224 TLPS(ph)PIDAK ddPTM_KYSE-520_SHP099_60min_R1 6 TLPSPIDAK 9 0 H0YLX2;A0A669KBM4;Q2KHR2-2;Q2KHR2 H0YLX2 RFX7 DNA-binding protein RFX7 1 TLPS(1)PIDAK;TLPS(1)PIDAK;TLPS(1)PIDAK;TLPS(1)PIDAK;T(0.011)LPS(0.989)PIDAK;TLPS(1)PIDAK 138.76 0.00043902 3860950000.0 8589440.0 8644870.0 6717460.0 5666970.0 6148670.0 7988040.0 6578800.0 7674940.0 9324160.0 7852580.0 True False 8112966.640575874 8229557.468985587 7150478.219916015 6205557.124963339 6632535.347853293 7938183.679347021 7243849.306900647 7648317.424484455 7631127.586945738 7783012.250414786 1.042394175872395 1.0573743435322234 0.9187288918291165 0.79732074488674 0.8521810238060232 1.01993719448713 0.9307256719934618 0.9826937409840062 0.9804851054344732 1.0 22.891897197242553 -9.223792039987543 15.212766651647476 0.999999999244876 0.9501318980842546 0.029175044518694238 0.07821509633699537 0.0 0.0 0.08393639934298604 0.020357567077950372 5.973212427775342e-10 9.223792039987543 -0.04986810116062146 TLPSGS(ph)PRPGQLERPTSLALDSR ddPTM_KYSE-520_SHP099_60min_R1 1 TLPSGSPRPGQLERPTSLALDSR 23 2 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 TLPS(0.036)GS(0.558)PRPGQLERPT(0.116)S(0.026)LALDS(0.264)R 94.834 0.0019769 2932500000.0 572860.0 575300.0 637330.0 488210.0 456210.0 417850.0 520400.0 545720.0 662070.0 545780.0 True False 541082.3138319023 547661.724457095 678413.3115640547 534609.3316143112 492111.1315201749 415242.0431564124 573007.1106145642 543827.0246920062 541854.7774265093 540944.8138104145 1.0002541849334303 1.0124169979546833 1.2541266581064199 0.9882881173192581 0.9097252047833582 0.7676236698369433 1.0592709200376704 1.0053281052114897 1.0016821745820705 1.0 19.045121894915734 -5.504853653021236 24.860280821661284 0.9527784530338351 1.087935449082412 0.2657250657380631 0.09791322401905787 963.9353934817528 1329463.7962647907 0.02920611079219219 0.04234449558354237 3.1271329595146563e-06 5.504853653021236 0.1351569960485769 TLQAHMEDLET(ph)S(ph)EDDS(ph)EEDGDHNR ddPTM_KYSE-520_SHP099_60min_R1 1 TLQAHMEDLETSEDDSEEDGDHNR 24 0 Q9H992;Q9H992-2 Q9H992 MARCH7 E3 ubiquitin-protein ligase MARCH7 3 TLQAHMEDLET(1)S(1)EDDS(1)EEDGDHNR 107.04 0.00062241 435640000.0 231090.0 262200.0 228870.0 271380.0 200720.0 238730.0 237580.0 215500.0 212960.0 199410.0 True False 218270.9770335058 249603.5184297762 243623.32640494755 297171.87360662787 216515.52205942333 237239.99751760272 261596.90495735634 214752.48079807797 174291.83228472737 197643.38253863237 1.1043677467462967 1.2628984346641985 1.2326409479322067 1.5035761369270289 1.0954858153022256 1.2003437427065415 1.3235803880568746 1.086565500143175 0.8818500778828727 1.0 17.592540126338474 -7.507075242037884 4.174883033356195 0.9461987583155371 1.2476615238533946 0.5475181983504855 0.11197014069870885 0.15444807379252964 6.327194415987524 0.07521384141183597 0.029579831701009696 3.111177275230644e-08 7.507075242037884 0.30146276553785745 TLQPPES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 TLQPPESPR 9 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 TLQPPES(1)PR;TLQPPES(1)PR 116.13 0.00083677 1232370000.0 1319880.0 1123680.0 1103840.0 1053480.0 1165680.0 1156400.0 1121890.0 1267350.0 1334900.0 1059420.0 True False 1246663.6252844506 1069696.7261219327 1174995.2926064462 1153602.422459687 1257412.384188065 1149182.4786551995 1235301.5897912637 1262953.8586517144 1092515.810090546 1050034.3630162883 1.1872598356717896 1.018725447278852 1.1190065144451082 1.098633019157481 1.1974964139040847 1.0944236866249808 1.1764392036111884 1.202773835918857 1.0404571969932748 1.0 20.002005111065085 -3.9526219293375298 15.995452806120479 1.1158416217495997 1.5961342489326766 0.0966028952381166 0.06869884035256517 4386200.752143648 38799011.471558996 0.016535726873693632 64323297.07521258 0.00011152649937626671 3.9526219293375298 0.48029262718307697 TLQRLS(ph)SGFDDIDLPSAVK ddPTM_KYSE-520_SHP099_60min_R1 7 TLQRLSSGFDDIDLPSAVK 19 1 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 T(0.018)LQRLS(0.729)S(0.253)GFDDIDLPSAVK;T(0.002)LQRLS(0.956)S(0.043)GFDDIDLPSAVK;T(0.001)LQRLS(0.754)S(0.245)GFDDIDLPSAVK;T(0.004)LQRLS(0.903)S(0.093)GFDDIDLPSAVK;T(0.01)LQRLS(0.938)S(0.053)GFDDIDLPSAVK;TLQRLS(0.713)S(0.286)GFDDIDLPSAVK;T(0.094)LQRLS(0.489)S(0.417)GFDDIDLPSAVK 248.16 1.4463e-26 3893330000.0 4231510.0 5090340.0 4716690.0 3195760.0 3739970.0 4098790.0 2970390.0 3661240.0 6674940.0 4187210.0 True False 3996779.7049939437 4845792.425643885 5020735.384370834 3499484.069559724 4034284.361481575 4073207.9312410457 3270666.009412754 3648540.0129798423 5462939.157544219 4150114.5770000904 0.9630528581413323 1.1676285884971072 1.2097823544910586 0.8432258928353071 0.9720898752626143 0.9814687897569718 0.7880905330996799 0.8791419960306708 1.316334538766663 1.0 21.98471973647964 -5.256532191129748 24.87113204235625 0.9567435867586175 1.1189019940490232 0.16710673733927994 0.14638928772954823 634.070254163144 3213650.44284428 0.0402056765227223 0.06691732628004914 5.53946482343914e-06 5.256532191129748 0.16215840729040576 TLQTDSIDSFET(ph)QRTPR ddPTM_KYSE-520_SHP099_60min_R1 1 TLQTDSIDSFETQRTPR 17 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TLQTDSIDSFET(0.637)QRT(0.363)PR 157.0 2.6559e-06 732390000.0 1162100.0 1169600.0 1051100.0 853070.0 938620.0 1070200.0 934220.0 1008300.0 1298100.0 1023100.0 True False 1097635.996411083 1113410.6603946085 1118855.5878194615 934145.5163151518 1012484.0539827407 1063520.484829466 1028660.0747085664 1004802.4426389897 1062397.7624380367 1014036.1299597565 1.0824426901383133 1.0979990036832277 1.1033685632718677 0.9212152197695607 0.9984694076165931 1.0487994001472842 1.0144215223863773 0.9908941239390224 1.0476922183040949 1.0 19.95167762559557 -5.219549748789393 24.997851529484716 1.0048774820859612 1.0949430245300544 0.6075617730305369 0.03368928511588864 344.97273930733394 205863.88119993117 0.009358075634724669 0.016208580986558804 6.031846086769521e-06 5.219549748789393 0.09006554244409326 TLQTDSIDSFETQRT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 16 TLQTDSIDSFETQRTPR 17 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFET(0.422)QRT(0.577)PR;TLQTDSIDS(0.002)FET(0.069)QRT(0.929)PR;TLQTDSIDSFET(0.011)QRT(0.989)PR;TLQTDSIDSFET(0.021)QRT(0.979)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFET(0.001)QRT(0.999)PR;TLQTDSIDSFETQRT(1)PR;TLQTDSIDSFET(0.179)QRT(0.821)PR;TLQTDSIDS(0.002)FET(0.031)QRT(0.968)PR;TLQTDSIDSFETQRT(1)PR 282.37 5.7514e-37 81300480000.0 25048040.0 26016990.0 23429710.0 19100190.0 22308720.0 22909990.0 19208520.0 21326860.0 28212620.0 22693750.0 True False 23658575.289170194 24767094.74810185 24940026.595461432 20915466.31491846 24064289.344746374 22767000.254380703 21150304.65868961 21252882.100386564 23089919.390273955 22492701.030470315 1.0518334484204674 1.101116967435368 1.1088053214096334 0.9298779318048457 1.0698710355927048 1.0121950326703228 0.9403185784596437 0.9448790552809021 1.0265516515332953 1.0 24.42295358140928 -5.2470275053277176 24.984492904124668 0.9890976473317901 1.088638425273296 0.524471434317058 0.04282309842262759 646.6525585716 1121038.2397171305 0.011949737017780397 0.02057944212142114 5.662034283384858e-06 5.2470275053277176 0.09954077794150584 TLRDS(ph)PNVEAAHLAR ddPTM_KYSE-520_SHP099_60min_R1 1 TLRDSPNVEAAHLAR 15 1 Q9UHF7;Q9UHF7-3;Q9UHF7-2;H0YC29;E5RJ97;E5RFF3 Q9UHF7 TRPS1 Zinc finger transcription factor Trps1 1 T(0.078)LRDS(0.922)PNVEAAHLAR 97.49 0.00099124 501770000.0 442960.0 400200.0 372940.0 369650.0 323600.0 351210.0 373190.0 395510.0 411980.0 369540.0 True False 418388.1257811317 380973.7912875534 396980.30912509834 404781.42486067524 349065.4789678625 349017.9681152654 410915.68718341494 394138.0681227279 337174.8171706517 366266.16309776943 1.142306245934733 1.0401555744745603 1.0838574488223478 1.1051564835723706 0.9530377472370675 0.9529080304972102 1.121904583562984 1.076097406293899 0.9205732091627797 1.0 18.48253290061054 -1.000000003951083 0.38215636199602293 1.0104606550413784 2.7109866052525318 0.26318146181390645 0.06403744575057871 111.48684224020111 1.52031679792294 0.05130109717552238 140.63280731245848 0.09999999909022952 1.000000003951083 1.7005259502111534 TLRFS(ph)LCS(ph)DNLEGISEGPSNR ddPTM_KYSE-520_SHP099_60min_R1 3 TLRFSLCSDNLEGISEGPSNR 21 1 Q14C86-6;Q14C86-5;Q14C86-2;Q14C86;Q14C86-3;H0Y7I9;C9IZ08;B4DGD8;A0A0A0MQV8 Q14C86-6 GAPVD1 GTPase-activating protein and VPS9 domain-containing protein 1 2 T(0.166)LRFS(0.836)LCS(0.998)DNLEGISEGPSNR;T(0.007)LRFS(0.993)LCS(1)DNLEGISEGPSNR;T(0.05)LRFS(0.951)LCS(0.999)DNLEGISEGPSNR 168.98 2.3453999999999998e-09 1186920000.0 736760.0 862460.0 810680.0 1171640.0 900650.0 884060.0 772120.0 858600.0 1144690.0 916580.0 True False 695890.4541053528 821026.1270211467 862937.7299338618 1282992.3133335882 971526.0310024892 878542.2536145941 850173.4247650218 855621.7169987463 936843.1512866468 908459.8142884504 0.7660112678186076 0.9037561310999915 0.9498909212728978 1.412271949902913 1.0694210307623075 0.9670678215994737 0.9358404316771223 0.9418377164750106 1.031243359972315 1.0 19.79306317270575 -4.6483657947304415 2.557613605268531 1.0466885194204265 0.7893362052457282 0.3073637582981744 0.1318057050619027 0.39476577202212015 4.8786767499037795 0.03872915351201626 0.15228674494708028 2.247161084299495e-05 4.6483657947304415 -0.2573523141746983 TLS(ph)DDLDEAAK ddPTM_KYSE-520_SHP099_60min_R1 1 TLSDDLDEAAK 11 0 A0A087WV29;Q9H0A0-2;Q9H0A0 A0A087WV29 NAT10 N-acetyltransferase 10 1 T(0.004)LS(0.996)DDLDEAAK 129.37 0.0001616 0.0 222520.0 200800.0 174500.0 181260.0 168440.0 210660.0 160610.0 207630.0 223330.0 204560.0 True False 210176.37201737752 191153.26659305528 185748.54920987162 198486.89590219385 181695.2697074993 209345.19279964082 176846.02620254637 206909.77999120622 182778.90169115394 202747.757545272 1.0366396874719896 0.9428132222393248 0.9161558749590383 0.9789844203720639 0.8961641396548031 1.0325401145455118 0.8722465212127342 1.0205280812785555 0.9015088694647625 1.0 17.629326432301276 TLS(ph)DDLDEAAKEFQEK ddPTM_KYSE-520_SHP099_60min_R1 8 TLSDDLDEAAKEFQEK 16 1 A0A087WV29;Q9H0A0-2;Q9H0A0 A0A087WV29 NAT10 N-acetyltransferase 10 1 T(0.019)LS(0.981)DDLDEAAKEFQEK;TLS(1)DDLDEAAKEFQEK;T(0.052)LS(0.948)DDLDEAAKEFQEK;TLS(1)DDLDEAAKEFQEK;T(0.022)LS(0.978)DDLDEAAKEFQEK;T(0.004)LS(0.996)DDLDEAAKEFQEK;T(0.004)LS(0.996)DDLDEAAKEFQEK;T(0.005)LS(0.995)DDLDEAAKEFQEK 226.45 1.6118e-18 1104761000.0 1449543.0 1457451.0 1395194.0 1183072.0 1311720.0 1225935.0 1142835.0 1168999.0 1712860.0 1255371.0 True False 1369133.9601976674 1387432.866281449 1485130.4376293279 1295510.8071764326 1414944.9013341288 1218283.484927501 1258363.9147947663 1164944.0153154165 1401847.8016867873 1244249.3896038593 1.1003694047489696 1.115076188000523 1.1935954721281075 1.0411986680490908 1.1371875390548636 0.9791312699099454 1.0113438072052428 0.9362624768385928 1.126661434114188 1.0 20.246844248590904 -6.258995654146675 24.980226858238535 1.0067377014734489 1.1173417883949868 0.4668746511084688 0.05698827731548133 186.00201727810233 1901353.1890825564 0.01852046294810596 0.017706126488518083 5.508132081987492e-07 6.258995654146675 0.11060408692153789 TLS(ph)DESIYNSQR ddPTM_KYSE-520_SHP099_60min_R1 3 TLSDESIYNSQR 12 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 TLS(1)DESIYNSQR;TLS(1)DESIYNSQR;T(0.001)LS(0.998)DES(0.001)IYNSQR 314.61 2.4741e-39 3121960000.0 3356100.0 3407200.0 3350870.0 3310090.0 2941890.0 3153670.0 2970800.0 3145770.0 3729740.0 3187870.0 True False 3169930.4427805147 3243512.9976885305 3566872.4417815655 3624679.9583851513 3173400.0059356117 3133986.775735513 3271117.4562139683 3134858.0580982384 3052513.235094093 3159627.951925329 1.003260665816337 1.0265490263535888 1.1288900136511582 1.1471856856363236 1.0043587581259024 0.9918847482741784 1.0352856431152608 0.992160503007325 0.9660989463123449 1.0 21.591323259526398 -5.91453599940178 13.124740063054533 0.9988883076692511 1.076634378292656 0.4481286607316094 0.042539298704865974 0.7641420953047771 114.38409705111606 0.014505070106721729 0.016449170723718223 1.217486069189619e-06 5.91453599940178 0.07774607062340488 TLS(ph)DESLCSGR ddPTM_KYSE-520_SHP099_60min_R1 6 TLSDESLCSGR 11 0 O60292;M0R2Q7 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.001)LS(0.999)DESLCSGR;TLS(1)DESLCSGR;T(0.013)LS(0.982)DES(0.005)LCSGR;T(0.004)LS(0.996)DESLCSGR;T(0.001)LS(0.998)DES(0.001)LCSGR;T(0.019)LS(0.943)DES(0.038)LCSGR 233.46 4.4184e-14 10489540000.0 8704110.0 7846320.0 7396520.0 6796950.0 7693850.0 7688260.0 7459470.0 7366300.0 8872920.0 7518240.0 True False 8221275.667086891 7469371.009633573 7873311.51405043 7442930.084422457 8299312.222981725 7640274.717524751 8213546.025011569 7340748.024607341 7261821.396111026 7451634.242702217 1.10328491701514 1.0023802519492588 1.056588562671495 0.998831912840021 1.1137573252618624 1.0253153158996338 1.1022476087115431 0.9851192081517591 0.9745273532746076 1.0 22.829125431849867 -7.294231357176226 23.048313026092824 0.9848673667727481 1.0540034971840953 0.407945089452443 0.03898872515492899 254.83429356146556 179111.42448782726 0.02003434027135944 0.009626062569470632 5.078888081656584e-08 7.294231357176226 0.06913613041134714 TLS(ph)DISNASSSFGWLSLDGDPTTNVTEGSQVPERPPKPFPR ddPTM_KYSE-520_SHP099_60min_R1 2 TLSDISNASSSFGWLSLDGDPTTNVTEGSQVPERPPKPFPR 41 2 A0A1B0GW38;A0A0U1RQX8;P22681;A0A0U1RR39;A0A0U1RRJ5 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 T(0.11)LS(0.89)DISNASSSFGWLSLDGDPTTNVTEGSQVPERPPKPFPR;T(0.029)LS(0.971)DISNASSSFGWLSLDGDPTTNVTEGSQVPERPPKPFPR 261.15 5.421299999999999e-42 1213070000.0 792020.0 685060.0 702120.0 703570.0 713250.0 743750.0 723830.0 778550.0 887640.0 667350.0 True False 748085.0717472739 652148.6893039763 747379.7786317202 770437.0812639657 769378.7171626334 739107.9803699465 797001.8003000391 775849.3917649358 726466.9515834678 661437.7981904437 1.13099837020787 0.9859561867920453 1.1299320671972422 1.1647914337095966 1.1631913375188017 1.1174262831546553 1.2049535156298452 1.1729740784205234 1.0983148431657979 1.0 19.33524596584393 -4.966851806365418 22.273099772501826 1.1430085901511344 1.058343436180293 0.1626389797199389 0.06264106916996137 76.27536977461041 51248.52309890437 0.015227758795997871 0.03169823177650146 1.0793149523733862e-05 4.966851806365418 -0.0846651539708414 TLS(ph)DPPS(ph)PLPHGPPNK ddPTM_KYSE-520_SHP099_60min_R1 6 TLSDPPSPLPHGPPNK 16 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2 H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 2 T(0.402)LS(0.599)DPPS(0.998)PLPHGPPNK;T(0.097)LS(0.903)DPPS(1)PLPHGPPNK;T(0.156)LS(0.845)DPPS(0.999)PLPHGPPNK;T(0.073)LS(0.927)DPPS(1)PLPHGPPNK;T(0.075)LS(0.925)DPPS(1)PLPHGPPNK;T(0.005)LS(0.995)DPPS(1)PLPHGPPNK 122.29 8.318e-05 7846820000.0 5929980.0 5550590.0 4978370.0 5367270.0 5953010.0 6519610.0 7063890.0 7848890.0 8790110.0 7804010.0 True False 5601032.188277947 5283931.324794553 5299283.695873636 5877373.727071434 6421478.019006417 6478918.695663459 7777976.9381228285 7821664.032534701 7194047.604640795 7734872.542827913 0.7241272764696621 0.6831310141876906 0.6851158395347247 0.7598539852503676 0.830198297832415 0.8376244934599439 1.0055727350458907 1.011220804121364 0.9300796573967347 1.0 22.88294608810319 -6.213552434412727 1.0242103554008746 0.9940394314839194 0.6943990892128172 0.9167461081969405 0.036331205917201015 0.13561975659975473 0.30089654525244536 0.02034786527138249 0.019349356109629144 6.11571960541667e-07 6.213552434412727 -0.29964034227110214 TLS(ph)DVEDQKELASPVSPELR ddPTM_KYSE-520_SHP099_60min_R1 4 TLSDVEDQKELASPVSPELR 20 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.006)LS(0.994)DVEDQKELASPVSPELR;T(0.18)LS(0.82)DVEDQKELASPVSPELR;T(0.033)LS(0.967)DVEDQKELASPVSPELR;T(0.179)LS(0.821)DVEDQKELASPVSPELR 160.67 6.148600000000001e-09 1245140000.0 1110630.0 1125570.0 1159100.0 968920.0 1053650.0 1064190.0 1004650.0 954320.0 1233700.0 1083260.0 True False 1049021.1399139857 1071495.927684985 1233817.4406255733 1061005.8654835788 1136566.2605515707 1057547.9954687636 1106209.8264391278 951009.6866599614 1009691.1790461487 1073663.1591635277 0.9770486497192098 0.9979814605166941 1.149166226013398 0.9882111129808999 1.058587370583759 0.9849904846252534 1.0303136668123702 0.8857616828362412 0.9404170855902158 1.0 20.034110016254218 -7.241239720252847 23.828596340198537 0.934817043509253 1.0283782266166785 0.3365259540624901 0.05408074543108492 441.06987176844336 520310.6144960609 0.025238123639892824 0.014542199107081238 5.7379965098201784e-08 7.241239720252847 0.09356118310742556 TLS(ph)FDTSK ddPTM_KYSE-520_SHP099_60min_R1 7 TLSFDTSK 8 0 Q7L804;Q7L804-2 Q7L804 RAB11FIP2 Rab11 family-interacting protein 2 1 TLS(0.999)FDT(0.001)SK;TLS(1)FDTSK;TLS(1)FDTSK;TLS(1)FDTSK;TLS(0.999)FDT(0.001)SK;TLS(0.999)FDT(0.001)SK;TLS(0.995)FDT(0.005)SK 196.06 3.9027e-06 2078450000.0 7531280.0 7825620.0 6758730.0 6508170.0 6345700.0 6948470.0 6939190.0 6852990.0 7819120.0 6696710.0 True False 7113504.885165538 7449665.468704909 7194408.550150359 7126704.520047335 6845070.48790594 6905102.021325927 7640671.045168095 6829218.577189889 6399364.9119748175 6637382.359361538 1.0717334786555524 1.1223800386002631 1.0839225707711682 1.073722159458788 1.03129066811278 1.0403351272338244 1.1511572833214125 1.0289023906476897 0.9641398619967985 1.0 22.662182955211623 -7.514721017665512 10.390675480308317 0.9867646844727069 1.0805571506607081 0.5850822302880536 0.03406115552302191 0.159416396856229 195.9412369649953 0.021401122387822408 0.009109665039819243 3.056884165610877e-08 7.514721017665512 0.09379246618800119 TLS(ph)KEEETKK ddPTM_KYSE-520_SHP099_60min_R1 5 TLSKEEETKK 10 2 J3QR09;J3KTE4;P84098 J3QR09 RPL19 Ribosomal protein L19;60S ribosomal protein L19 1 T(0.025)LS(0.974)KEEET(0.001)KK;T(0.049)LS(0.942)KEEET(0.01)KK;T(0.046)LS(0.954)KEEETKK;T(0.01)LS(0.99)KEEETKK;T(0.201)LS(0.799)KEEETKK 115.91 0.00044539 12677920000.0 8316940.0 7217120.0 6691830.0 7155110.0 7474860.0 7248300.0 7087010.0 6958440.0 9017720.0 7360880.0 True False 7855582.758791156 6870398.7220820235 7123196.069106576 7835129.503137729 8063088.955864384 7203060.671079627 7803434.1333522815 6934302.795752111 7380329.3662219765 7295668.329877987 1.0767461462879486 0.9417093008389164 0.97635963520092 1.0739426669179142 1.1051885298627921 0.9873064872728516 1.069598257557137 0.9504684810511501 1.0116042879851428 1.0 22.798608713613472 -9.783810359249852 9.086162589251328 0.9999999999312901 1.0200983746360588 0.01313883152110551 0.054637399694566 0.0 0.0 0.054070959867628644 0.013114134047809792 1.645089917883852e-10 9.783810359249852 0.020098374704768718 TLS(ph)LVK ddPTM_KYSE-520_SHP099_60min_R1 1 TLSLVK 6 0 F8VRW9;F8W0R1;F8VR88;F8VUZ2;F8VPA6;A0A087WU02;Q96RQ1 F8VRW9 ERGIC2 Endoplasmic reticulum-Golgi intermediate compartment protein 2 1 T(0.002)LS(0.998)LVK 116.25 0.0084993 585050000.0 1109600.0 1194300.0 925040.0 950060.0 979020.0 974180.0 1028200.0 1164300.0 1370700.0 936030.0 True False 1048048.2760672393 1136924.035319154 984669.5585163312 1040353.416754046 1056063.3041381845 968099.7812662764 1132140.4902649787 1160261.315049664 1121815.4325351028 927737.5024203213 1.1296819125378095 1.2254803027290562 1.0613665567549906 1.121387692143443 1.1383212399876919 1.043506141274505 1.220324162073218 1.2506353489243718 1.209194874205756 1.0 19.823357135902413 -6.794249100992153 24.999288450290877 1.1909248805049293 1.122990214208975 0.06360491932563839 0.07881471273917524 381.9930408057427 291055.21661886654 0.03186807396234231 0.021486873944675532 1.6060198139882674e-07 6.794249100992153 -0.06793466629595435 TLS(ph)MDK ddPTM_KYSE-520_SHP099_60min_R1 4 TLSMDK 6 0 P17858;P17858-2 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type 1 T(0.001)LS(0.999)MDK;TLS(1)MDK;TLS(1)MDK;TLS(1)MDK 133.86 0.0069976 2321850000.0 4373640.0 3441460.0 2994650.0 3561510.0 3784380.0 3994940.0 4089580.0 4478140.0 3884030.0 3833240.0 True False 4131025.47056481 3276127.0958632296 3187689.9306094116 3899994.83959297 4082189.175823239 3970006.097612248 4502994.656854554 4462606.377545732 3178788.0604284843 3799280.4758155905 1.087317847908558 0.8623019849988686 0.8390246392443851 1.0265087993420015 1.0744637574952707 1.0449363038300055 1.1852230140729205 1.1745925066476557 0.8366815981771114 1.0 21.857294789916708 -5.458810314319128 6.2305256494017565 1.0663167663126765 0.9231423399688304 0.19419396157788837 0.11012828174049202 0.3241211755731531 24.64158828157387 0.03138114329233357 0.04636661100122532 3.4768798707001923e-06 5.458810314319128 -0.14317442634384603 TLS(ph)MDKGF ddPTM_KYSE-520_SHP099_60min_R1 7 TLSMDKGF 8 1 P17858;P17858-2 P17858 PFKL ATP-dependent 6-phosphofructokinase, liver type 1 T(0.001)LS(0.999)MDKGF;TLS(1)MDKGF;T(0.013)LS(0.987)MDKGF;TLS(1)MDKGF;T(0.006)LS(0.994)MDKGF;TLS(1)MDKGF;TLS(1)MDKGF 103.19 0.0033988 5650190000.0 9610810.0 8006930.0 7146730.0 6689150.0 7692400.0 8057040.0 7380830.0 7843310.0 9099510.0 7419250.0 True False 9077679.210625242 7622265.0641530445 7607419.650972294 7324884.804833724 8297748.116231108 8006753.024752753 8126956.326359132 7816103.3882523095 7447268.363980082 7353521.21708915 1.2344669910694281 1.036546280228219 1.034527463291069 0.9961057551328095 1.1284047290089583 1.0888325182424892 1.105178877769818 1.0629062128886153 1.012748606296677 1.0 22.810003816001718 -6.390222409058838 0.011284070079626745 4.1888804851828863e-07 2.138910199176583 0.21785156815840434 0.06134807469948955 3467.651299824142 17.057058096289325 1571.9937242143694 1659.063555496009 4.071717053451748e-07 6.390222409058838 2.138909780288534 TLS(ph)MIEEEIR ddPTM_KYSE-520_SHP099_60min_R1 28 TLSMIEEEIR 10 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 T(0.041)LS(0.959)MIEEEIR;T(0.228)LS(0.772)MIEEEIR;T(0.183)LS(0.817)MIEEEIR;T(0.003)LS(0.997)MIEEEIR;T(0.252)LS(0.748)MIEEEIR;TLS(1)MIEEEIR;TLS(1)MIEEEIR;T(0.019)LS(0.981)MIEEEIR;T(0.001)LS(0.999)MIEEEIR;T(0.018)LS(0.982)MIEEEIR;TLS(1)MIEEEIR;TLS(1)MIEEEIR;TLS(1)MIEEEIR;TLS(1)MIEEEIR;T(0.024)LS(0.976)MIEEEIR;T(0.004)LS(0.996)MIEEEIR;TLS(1)MIEEEIR;TLS(1)MIEEEIR;TLS(1)MIEEEIR;T(0.001)LS(0.999)MIEEEIR;TLS(1)MIEEEIR;TLS(1)MIEEEIR;T(0.001)LS(0.999)MIEEEIR;TLS(1)MIEEEIR;T(0.001)LS(0.999)MIEEEIR;T(0.002)LS(0.998)MIEEEIR;T(0.001)LS(0.999)MIEEEIR;TLS(1)MIEEEIR 237.76 1.4755e-13 32693797000.0 7849949.0 8203739.0 7412624.0 5823702.0 6146485.0 8028301.0 7020367.0 8515286.0 9809487.0 9270265.0 True False 7414496.680484625 7809619.064376705 7890453.603657747 6377184.88712015 6630178.400784253 7978193.395511949 7730054.208539274 8485748.460348684 8028331.437843782 9188137.664257033 0.8069640390051962 0.8499675722923774 0.8587652788826364 0.6940671896904822 0.7216019875906354 0.8683145254285956 0.8413080529485447 0.9235547801334402 0.8737713485807861 1.0 23.13134104184901 -7.557016598876428 0.8021000414335572 0.9846122988255472 0.7934273634412521 0.5542288615698749 0.05635147917157375 0.4959465934903242 0.6433131798388141 0.058047318308417147 0.02358411332934934 2.7732141094805322e-08 7.557016598876428 -0.19118493538429515 TLS(ph)NAEDYLDDEDS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 4 TLSNAEDYLDDEDSD 15 0 Q92882 Q92882 OSTF1 Osteoclast-stimulating factor 1 2 T(0.013)LS(0.987)NAEDYLDDEDS(1)D;TLS(1)NAEDYLDDEDS(1)D;T(0.012)LS(0.988)NAEDYLDDEDS(1)D;T(0.016)LS(0.984)NAEDYLDDEDS(1)D 258.89 3.6477e-20 199939000.0 472592.0 494103.0 471126.0 479015.0 498657.0 581754.0 564940.0 620359.0 739060.0 637410.0 True False 446376.3796712045 470365.5502162762 501495.5357882523 524540.4415788894 537898.4689297815 578123.0574953109 622049.6484830747 618207.1194218785 604865.3341864697 631763.0432974753 0.706556650324703 0.7445284354735473 0.7938032164254272 0.830280351381525 0.8514243981766179 0.9150947710993167 0.9846249398133489 0.9785427083470379 0.957424370740945 1.0 19.269024019608178 -5.645744216605456 0.5499861186785703 0.9993331340086823 0.6818345187652789 0.9720701129027294 0.016820065057646053 0.19353743294887057 0.11331653987451676 0.013799615309567251 0.03302813255716411 2.2607668863118695e-06 5.645744216605456 -0.3174986152434034 TLS(ph)PGRR ddPTM_KYSE-520_SHP099_60min_R1 1 TLSPGRR 7 1 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 1 T(0.01)LS(0.99)PGRR 52.49 0.04553 2969800000.0 893080.0 948660.0 906240.0 592190.0 814390.0 856600.0 855780.0 902810.0 1023000.0 698180.0 True False 843539.0720891586 903084.9496323107 964657.6804352667 648471.5595515847 878477.8597547511 851253.6416603638 942290.5940079408 899678.362827437 837248.9877313867 691994.6683758214 1.2189964903472834 1.3050461093174874 1.3940247295537866 0.9371048494833208 1.269486456906704 1.230144798164903 1.3617021012887112 1.3001232580867557 1.2099067030335526 1.0 19.400401396782346 -8.036691932889477 19.075234034250265 0.9999999961242407 1.2517946229331192 0.29053440656127094 0.11762972487105659 294.37425169129415 153039.76700201622 0.11518129021974366 0.029739672162736448 9.18984247484328e-09 8.036691932889477 0.25179462680887843 TLS(ph)PTPSAEGYQDVR ddPTM_KYSE-520_SHP099_60min_R1 8 TLSPTPSAEGYQDVR 15 0 F8W8M4;A0A0A0MRL6;A0A3B3IS55;O14639-2;O14639-6;O14639;A0A494C1P1;A0A494C1G0;J3QSX6;O14639-4;O14639-3;O14639-5;H0Y7N6;F6XFR5 F8W8M4;J3QSX6 ABLIM1 Actin-binding LIM protein 1 1 T(0.058)LS(0.94)PT(0.002)PSAEGYQDVR;T(0.025)LS(0.975)PTPSAEGYQDVR;T(0.004)LS(0.996)PTPSAEGYQDVR;T(0.002)LS(0.998)PTPSAEGYQDVR;TLS(1)PTPSAEGYQDVR;TLS(1)PTPSAEGYQDVR;TLS(1)PTPSAEGYQDVR;TLS(0.999)PT(0.001)PSAEGYQDVR 355.42 2.3228999999999994e-67 18505410000.0 4128290.0 4616960.0 3655330.0 3088970.0 2962830.0 4031940.0 2991330.0 4068480.0 4864840.0 3883550.0 True False 3899285.524157912 4395154.311401757 3890958.420534786 3382544.780067308 3195987.8648033086 4006775.1668877937 3293722.828967456 4054367.392470374 3981507.6886365167 3849144.7683561803 1.0130264666099178 1.1418521713016152 1.010863101986279 0.8787782698835359 0.830311161865754 1.0409520576694056 0.8557025072283982 1.0533164212999544 1.0343876180933729 1.0 21.876106502011478 -4.997770754482376 22.946763044638786 0.9519333660311184 1.0771690067153432 0.26487837837584904 0.08063134652134715 32.05031829401257 329851.59126342746 0.02145912103523375 0.04410708512746304 1.005146224052915e-05 4.997770754482376 0.12523564068422477 TLS(ph)SPTEPVKR ddPTM_KYSE-520_SHP099_60min_R1 1 TLSSPTEPVKR 11 1 J3QQN1;P40306 J3QQN1 PSMB10 Proteasome subunit beta type-10 1 TLS(0.656)S(0.339)PT(0.005)EPVKR 113.24 0.00018447 1282800000.0 1346800.0 1132000.0 1095100.0 1057800.0 1130900.0 1086600.0 1080800.0 1086100.0 1553500.0 1070400.0 True False 1272090.3192207604 1077617.020833359 1165691.898221952 1158332.9939608336 1219895.3960591955 1079818.1263461947 1190057.8115915086 1082332.5725976469 1271423.560548102 1060917.0887585976 1.1990478169309735 1.0157410341031479 1.0987587159953787 1.0918223546726207 1.149849888351428 1.017815753735962 1.1217255563146988 1.0201858223097415 1.198419343057074 1.0 20.016880482588448 -6.244924409038497 24.939747550757627 1.0760219161914926 1.1039989660941933 0.06806605005505972 0.06961084501445194 3328.1965969317353 5026012.505139408 0.021611076543885614 0.021565879162685493 5.689519509423959e-07 6.244924409038497 0.02797704990270078 TLS(ph)SSAQEDIIR ddPTM_KYSE-520_SHP099_60min_R1 7 TLSSSAQEDIIR 12 0 Q9H788-2;Q9H788 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 T(0.003)LS(0.957)S(0.037)S(0.002)AQEDIIR;TLS(0.991)S(0.006)S(0.003)AQEDIIR;TLS(0.496)S(0.496)S(0.009)AQEDIIR;TLS(0.981)S(0.016)S(0.003)AQEDIIR;TLS(0.767)S(0.116)S(0.116)AQEDIIR;T(0.006)LS(0.677)S(0.105)S(0.212)AQEDIIR;T(0.012)LS(0.662)S(0.102)S(0.223)AQEDIIR 220.06 7.3302e-11 5975100000.0 4057160.0 4388970.0 3869060.0 3535660.0 3797820.0 5246410.0 4439090.0 5655080.0 6420270.0 5676290.0 True False 3832101.2470520553 4178117.293221719 4118465.7983148773 3871688.0633650627 4096686.8273600913 5213665.209133028 4887836.538543437 5635463.847385601 5254510.809835956 5626002.486686801 0.6811410510607171 0.7426440537679618 0.7320412331954507 0.6881774532675565 0.7281701060485425 0.9267086570740921 0.8687938816432916 1.0016817199638979 0.933968803296847 1.0 22.42367875964652 -6.276861685538343 3.2978654727775347 0.9463592208361733 0.7125382259200288 0.8992964614546095 0.03885410504806519 0.07624364072938405 1.734830084954663 0.014216990479714373 0.013087695420851659 5.286135782539546e-07 6.276861685538343 -0.2338209949161445 TLSASTQDLS(ph)PH ddPTM_KYSE-520_SHP099_60min_R1 3 TLSASTQDLSPH 12 0 Q6P597;Q6P597-3;Q6P597-2 Q6P597 KLC3 Kinesin light chain 3 1 TLSASTQDLS(1)PH;TLSASTQDLS(1)PH;TLSASTQDLS(1)PH 250.53 9.7195e-16 1499930000.0 1831000.0 1835900.0 1671910.0 1505570.0 1688250.0 1816010.0 1534920.0 1677770.0 2113300.0 1692660.0 True False 1729430.779991994 1747700.6082579182 1779683.9937505845 1648658.9201338731 1821105.6701714906 1804675.6079752957 1690084.6929756082 1671950.2074644598 1729577.9919577118 1677664.3492695533 1.0308562500866036 1.0417462879382626 1.0608105217980284 0.9827108270207273 1.0855006074155364 1.07570719301572 1.0074033543786411 0.9965939898480995 1.0309439982501634 1.0 20.678022673610712 -6.7981831274231705 24.9053601558889 1.0084514466355305 1.045580154297786 0.30617456629787876 0.027633910297138898 222.44749915853018 150775.66568511818 0.011801952619844642 0.00795718981609516 1.5915374875397755e-07 6.7981831274231705 0.03712870766225551 TLSDPPS(ph)PLPHGPPNK ddPTM_KYSE-520_SHP099_60min_R1 3 TLSDPPSPLPHGPPNK 16 0 H0YBF7;A0A0A0MRE5;Q9ULH1;Q9ULH1-2 H0YBF7 ASAP1 Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 1 TLSDPPS(1)PLPHGPPNK;T(0.008)LS(0.007)DPPS(0.984)PLPHGPPNK;T(0.002)LS(0.002)DPPS(0.995)PLPHGPPNK 116.29 0.00011809 2451970000.0 2854220.0 3500190.0 2648610.0 2585290.0 3253640.0 4989300.0 4014400.0 5764800.0 6852800.0 5784800.0 True False 2695890.726853489 3332035.6185077024 2819343.6385258357 2830995.18430422 3509682.9573207553 4958159.928013135 4420214.728768462 5744803.254314432 5608504.2650299575 5733551.172506293 0.47019563369049705 0.5811469224318753 0.4917273001844375 0.4937594693284501 0.6121307461509192 0.8647624794540355 0.770938393288337 1.0019624978428892 0.9781903215452293 1.0 22.45099754286965 -6.453501626751295 0.9882194463030478 0.9929360044574285 0.49788282616188445 0.9196291861409589 0.05975729064003557 0.14093154170172986 0.28586282559663845 0.038273288398320685 0.028928034214477556 3.5196410415863804e-07 6.453501626751295 -0.495053178295544 TLSDVEDQKELAS(ph)PVSPELR ddPTM_KYSE-520_SHP099_60min_R1 4 TLSDVEDQKELASPVSPELR 20 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 TLSDVEDQKELAS(1)PVSPELR;TLSDVEDQKELAS(1)PVSPELR;TLSDVEDQKELAS(1)PVSPELR;TLSDVEDQKELAS(0.99)PVS(0.01)PELR 215.28 6.1209e-19 2943770000.0 3318100.0 3348830.0 2870630.0 2506560.0 2847500.0 3165560.0 2634790.0 2994680.0 3828660.0 3320860.0 True False 3134038.3785316385 3187947.180103687 3055675.402970395 2744782.708775253 3071582.049941246 3145802.5658351397 2901140.2862723838 2984292.1540435664 3133471.8566643703 3291439.7639899827 0.9521785611329137 0.9685570475818647 0.9283704463928008 0.8339155219562471 0.9332031786046667 0.9557527378297523 0.8814198327468505 0.9066829011100958 0.952006441359231 1.0 21.650287364835968 -8.038153546777357 4.086670964447559 0.9999161655590753 0.9195831845035751 0.3050244724312896 0.03743113389133141 0.2862111087758186 14.078250172858569 0.038337431708686046 0.010064661614009922 9.158966134832314e-09 8.038153546777357 -0.08033298105550013 TLSDVEDQKELASPVS(ph)PELR ddPTM_KYSE-520_SHP099_60min_R1 2 TLSDVEDQKELASPVSPELR 20 1 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 1 T(0.001)LS(0.001)DVEDQKELAS(0.009)PVS(0.988)PELR;TLSDVEDQKELASPVS(1)PELR 181.24 5.2814e-10 1004450000.0 547448.0 579910.0 527078.0 390704.0 438615.0 587980.0 392492.0 531903.0 644260.0 525868.0 True False 517079.96812946856 552050.2531373437 561054.2912346171 427836.39069055923 473131.5051220302 584310.1987198927 432168.9217127817 530057.9526400933 527278.6244729456 521209.218639113 0.9920775566471637 1.059172081757796 1.0764473673346384 0.8208534603582953 0.9077573615397391 1.1210665080819895 0.829165920820017 1.016977316755994 1.0116448551115038 1.0 18.991503075547993 TLSGGRPGAGPELELGTAGS(ph)PGGAPPEAAPGDCTR ddPTM_KYSE-520_SHP099_60min_R1 1 TLSGGRPGAGPELELGTAGSPGGAPPEAAPGDCTR 35 1 Q8WYP3;Q8WYP3-2 Q8WYP3 RIN2 Ras and Rab interactor 2 1 TLSGGRPGAGPELELGTAGS(1)PGGAPPEAAPGDCTR 239.91 2.6776999999999995e-31 398060000.0 101960.0 90581.0 69201.0 63143.0 75903.0 91965.0 72309.0 95323.0 102390.0 105610.0 True False 96304.07554777912 86229.35279514708 73661.80718551483 69144.09173536483 81876.13427100633 91391.01232231536 79618.69938783356 94992.34676155553 83798.55704185402 104674.3775633366 0.9200348527461484 0.8237866305244684 0.7037233838906124 0.6605636770424258 0.782198434583139 0.8730982161037097 0.7606321741885468 0.9075033353226997 0.8005641780974432 1.0 16.675548813685722 -7.263964977034348 24.86322182670135 0.8905253238390689 0.7852108624041394 0.27321494067149654 0.08399170784470011 322.43726714347883 3174182.1114873453 0.045610101831473994 0.02352024147735564 5.4454656513571875e-08 7.263964977034348 -0.10531446143492951 TLSGLFSS(ph)PKSPK ddPTM_KYSE-520_SHP099_60min_R1 1 TLSGLFSSPKSPK 13 1 A0A1B0GUS7 A0A1B0GUS7 1 T(0.084)LS(0.084)GLFS(0.084)S(0.747)PKS(0.002)PK 59.708999999999996 0.03451 345760000.0 1268800.0 1195900.0 1012900.0 1076200.0 1140800.0 1254200.0 1149900.0 1080000.0 1340100.0 1409000.0 True False 1198417.1347099065 1138447.1689175041 1078193.1546973006 1178481.72442867 1230574.4697359002 1246372.0725781326 1266143.113942519 1076253.7320738942 1096771.621171877 1396517.3561854134 0.8581469678138355 0.8152044540478696 0.7720585425750703 0.8438718782899286 0.8811737743791555 0.8924859165249456 0.9066433068909279 0.7706697860266347 0.7853619694120438 1.0 20.41340207314399 -5.515170806900124 22.847463725354107 0.8638113275985524 0.813947059906453 0.1347315951268775 0.06328122069967311 269.2594856515631 798126.7352520649 0.018756750792163716 0.025411986575432133 3.053719856858253e-06 5.515170806900124 -0.049864267692099395 TLSNAEDYLDDEDS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 3 TLSNAEDYLDDEDSD 15 0 Q92882 Q92882 OSTF1 Osteoclast-stimulating factor 1 1 TLSNAEDYLDDEDS(1)D;TLSNAEDYLDDEDS(1)D;TLSNAEDYLDDEDS(1)D 303.36 6.838999999999999e-34 808641000.0 2207000.0 2025460.0 1513060.0 1637200.0 1453090.0 1448260.0 1190520.0 1196380.0 1435780.0 1177630.0 True False 2084573.3104545746 1928153.861322559 1610594.2685815971 1792798.995757873 1567439.9160488592 1439220.8721352285 1310869.3799555171 1192230.0370171925 1175078.5450683958 1167197.1143822765 1.7859650994406435 1.6519522174650068 1.3798819828594098 1.5359864873438176 1.3429093481595915 1.2330572569115001 1.1230916901720385 1.021447039515827 1.006752441887496 1.0 20.154616790976092 -5.445858707842693 0.3973806389262269 0.9395011604194874 1.9435599527936565 0.9312333554174509 0.07000474481298342 0.5773941475220551 0.1392474193768761 0.07015462474951437 0.25432241423381013 3.582129581535352e-06 5.445858707842693 1.004058792374169 TLSPT(ph)PASATAPTSQGIPTS(ph)DEES(ph)TPKK ddPTM_KYSE-520_SHP099_60min_R1 1 TLSPTPASATAPTSQGIPTSDEESTPKK 28 1 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 3 T(0.065)LS(0.422)PT(0.507)PAS(0.005)AT(0.002)APTSQGIPT(0.239)S(0.761)DEES(0.631)T(0.37)PKK 148.77 7.549500000000001e-07 920430000.0 654230.0 570570.0 605280.0 530330.0 607960.0 555160.0 572050.0 568200.0 755140.0 533000.0 True False 617938.5577248291 543158.9607569696 644297.3172822413 580732.4037504708 655802.9931807835 551695.0405138546 629878.3966699876 566229.0468188764 618025.6115302831 528278.0346677247 1.1697222242327354 1.0281687390213086 1.2196178432584086 1.099293110143674 1.2413974273855037 1.044327048087204 1.19232365408902 1.0718390878678536 1.1698870120901537 1.0 19.010937899593525 -10.614598102400183 2.636091844918629 0.9869631363886322 1.1354910405617833 0.2568285522050787 0.0700493378094361 20166835.034931768 18534129.53092751 1813152.8788151038 0.015801918752815825 2.4288567277293063e-11 10.614598102400183 0.1485279041731511 TLSS(ph)PSNRPSGETSVPPPPAVGR ddPTM_KYSE-520_SHP099_60min_R1 6 TLSSPSNRPSGETSVPPPPAVGR 23 1 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 T(0.008)LS(0.169)S(0.819)PS(0.004)NRPSGETSVPPPPAVGR;T(0.012)LS(0.221)S(0.759)PS(0.008)NRPSGETSVPPPPAVGR;TLS(0.229)S(0.769)PS(0.002)NRPSGETSVPPPPAVGR;TLS(0.028)S(0.955)PS(0.017)NRPSGETSVPPPPAVGR;TLS(0.017)S(0.961)PS(0.021)NRPSGETSVPPPPAVGR;TLS(0.028)S(0.966)PS(0.006)NRPSGETSVPPPPAVGR 204.92 5.0445e-16 28176160000.0 5450520.0 5677170.0 4176915.0 3229115.0 3527249.0 4726793.0 4132213.0 4816881.0 5293770.0 5023979.0 True False 5148168.790257759 5404430.2315941 4446165.624200291 3536009.118731178 3804823.4289984982 4697291.331572162 4549937.41655254 4800172.364079474 4332554.813081897 4979470.454656514 1.0338787702703383 1.0853423633712271 0.8928992881246022 0.7101175016360436 0.7641020192097829 0.9433314996737304 0.9137392134333683 0.9639925385219684 0.8700834461283611 1.0 22.247560895339994 -4.797696735373957 6.849019166229242 0.8733046385504694 1.059738731742522 0.41216717225049626 0.08425207986047611 0.16515068164447516 22.45625428359163 0.023957537416369922 0.052047037922155995 1.5933209429151892e-05 4.797696735373957 0.18643409319205262 TLSSFFT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 TLSSFFTPR 9 0 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 TLSSFFT(1)PR;TLSSFFT(1)PR;TLSSFFT(1)PR;TLSSFFT(1)PR;TLSSFFT(1)PR;TLSSFFT(1)PR;TLSSFFT(1)PR;TLSSFFT(1)PR 195.8 1.5894e-05 3693678000.0 4063490.0 4193110.0 3849970.0 3130070.0 3287480.0 3374730.0 3138400.0 3355790.0 4157770.0 3939330.0 True False 3838080.1093335156 3991666.701613579 4098145.2263697973 3427550.9117101394 3546185.9727974897 3353667.0582774645 3455660.0998323415 3344149.5477372776 3402823.7768523246 3904430.600952368 0.983006359082764 1.0223428483118466 1.0496140526534594 0.8778619117661078 0.9082466395823515 0.8589388315570108 0.8850612171181728 0.8565012134987297 0.8715288155006029 1.0 21.89668073892613 -5.267301008105347 24.891108496469283 0.8867984868923955 1.0187232649894051 0.646681195407811 0.041866187656781205 239.10936543054729 1015366.2347628536 0.011057783087477997 0.016910543310470868 5.403796577222356e-06 5.267301008105347 0.13192477809700964 TLSSS(ph)AQEDIIR ddPTM_KYSE-520_SHP099_60min_R1 1 TLSSSAQEDIIR 12 0 Q9H788-2;Q9H788 Q9H788-2 SH2D4A SH2 domain-containing protein 4A 1 TLS(0.041)S(0.085)S(0.875)AQEDIIR 225.21 4.2413999999999994e-11 837030000.0 590980.0 629180.0 540590.0 559360.0 490520.0 784950.0 729780.0 863840.0 948050.0 857740.0 True False 558197.1613105778 598953.2483815661 575437.296374582 612521.406222283 529121.1333229791 780050.8358875823 803553.2843664433 860843.5406617709 775908.0183956402 850141.0909116213 0.6565935552085984 0.7045339353486584 0.676872700927243 0.7204938248137912 0.6223921405276307 0.9175545615035734 0.9451999120578666 1.0125890277091218 0.9126814674533851 1.0 19.697342767765647 -6.354297327142929 4.622211635169073 0.9635525469681271 0.6805392097772051 0.9360555240657796 0.036874794318480175 0.051512934584439056 1.876382154274668 0.01284933378890199 0.01128764432039738 4.422854707459695e-07 6.354297327142929 -0.28301333719092203 TLSSS(ph)SMDLSR ddPTM_KYSE-520_SHP099_60min_R1 8 TLSSSSMDLSR 11 0 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 TLS(0.003)S(0.08)S(0.606)S(0.312)MDLSR;TLS(0.002)S(0.011)S(0.967)S(0.019)MDLSR;TLSS(0.032)S(0.943)S(0.024)MDLSR;TLSS(0.005)S(0.993)S(0.002)MDLSR;TLSS(0.017)S(0.983)SMDLSR;TLSS(0.023)S(0.929)S(0.048)MDLSR;TLSS(0.005)S(0.957)S(0.038)MDLSR;TLSS(0.005)S(0.497)S(0.497)MDLSR 287.29 2.5626e-28 29574400000.0 17867320.0 15864370.0 16311990.0 14727130.0 14408850.0 14241540.0 13944570.0 16830000.0 17680090.0 17641010.0 True False 16876184.141980603 15102221.852295166 17363486.97550679 16126792.007326925 15542744.519858116 14152653.266228963 15354223.221488357 16771620.658151526 14469831.334799413 17484724.3758981 0.9651958920921657 0.8637380565811431 0.993066095994145 0.922336072369375 0.8889327727283528 0.8094295890496137 0.8781507155270607 0.9592156157331507 0.8275698846443024 1.0 24.059591718202036 -4.233882309975341 22.698067494277918 0.9024514806870073 0.9651962016724299 0.07893393817491179 0.061543988405324206 7083.902429000324 5834509.03814314 0.01515587468759967 1.0847920821600983 5.8360323424387014e-05 4.233882309975341 0.06274472098542261 TLSSSS(ph)MDLSR ddPTM_KYSE-520_SHP099_60min_R1 1 TLSSSSMDLSR 11 0 Q9H0B6;Q9H0B6-2 Q9H0B6 KLC2 Kinesin light chain 2 1 TLSS(0.046)S(0.349)S(0.606)MDLSR 173.72 3.1647e-07 1300700000.0 752670.0 730640.0 696330.0 639280.0 665530.0 664300.0 618840.0 778150.0 803300.0 774070.0 True False 710917.8946895528 695538.9576870005 741216.545967393 700036.9789934602 717903.424652291 660153.8572904272 681398.3864963816 775450.7792715759 657440.9695450857 767212.3420173468 0.9266246849212951 0.9065794690660416 0.9661165564912588 0.9124422805200809 0.9357297651972067 0.860457817394576 0.8881483641213049 1.0107381448434034 0.856921784934243 1.0 19.549266403374713 -10.328869154314967 3.803927685143352 1.0002243347110644 0.9197496764659646 0.23606813252955094 0.044067881476982554 10343658.431761993 14043201.941453014 15477.98795966324 0.010290370484622703 4.689546490789154e-11 10.328869154314967 -0.0804746582450998 TLSVAAAFNEDEDS(ph)EPEEMPPEAK ddPTM_KYSE-520_SHP099_60min_R1 5 TLSVAAAFNEDEDSEPEEMPPEAK 24 0 Q8WW12 Q8WW12 PCNP PEST proteolytic signal-containing nuclear protein 1 TLS(0.001)VAAAFNEDEDS(0.998)EPEEMPPEAK;T(0.066)LS(0.066)VAAAFNEDEDS(0.868)EPEEMPPEAK;T(0.066)LS(0.066)VAAAFNEDEDS(0.869)EPEEMPPEAK;T(0.006)LS(0.006)VAAAFNEDEDS(0.988)EPEEMPPEAK;T(0.008)LS(0.008)VAAAFNEDEDS(0.983)EPEEMPPEAK 99.11 0.00015219999999999999 1251570000.0 914614.0 1026013.0 740480.0 701546.0 752139.0 869278.0 766729.0 949008.0 1026820.0 885746.0 True False 863878.5381821936 976721.7954030898 788212.5256098906 768220.7209125047 811328.0602144904 863852.5135596978 844237.4498739325 945716.1127481319 840375.3720257503 877898.9795399616 0.984029550455663 1.1125674117025557 0.8978396649041913 0.8750673355550195 0.9241701825871175 0.9839999062447659 0.9616567162617408 1.0772493587402368 0.9572574881749214 1.0 19.743695411803703 -7.10861755790629 24.179442794446942 1.0142443505967607 0.9619767094644992 0.10100156243610647 0.06645695853841468 53.55042997350325 11882.892623337906 0.03361915907271336 0.019410038993398538 7.787219960367816e-08 7.10861755790629 -0.052267641132261455 TLT(ph)AEEAEEEWERR ddPTM_KYSE-520_SHP099_60min_R1 1 TLTAEEAEEEWERR 14 1 P35269;M0R0R9 P35269 GTF2F1 General transcription factor IIF subunit 1 1 T(0.316)LT(0.684)AEEAEEEWERR 159.64 7.8303e-08 242030000.0 94628.0 96255.0 81840.0 99475.0 84680.0 95927.0 100800.0 98282.0 134950.0 99396.0 True False 89378.7962037587 91630.76531829956 87115.53734862994 108929.0740917506 91343.83423670754 95328.28401068618 110989.84771319771 97941.0826811913 110446.48181265945 98515.4287689179 0.9072568360171228 0.930115886042913 0.8842831872860438 1.105705730086801 0.9272033363521934 0.9676482679103227 1.126624013113117 0.9941699884484712 1.1211084719706954 1.0 16.588062066202646 -5.250396942826859 0.5736820103197416 1.0540722132990288 0.8730719322501669 0.3583566914137881 0.06937151312303731 1.6884736856350844 0.8836354841401908 0.04463748194145529 0.17925665816040773 5.618275830501273e-06 5.250396942826859 -0.1810002810488619 TLT(ph)EPSVDFNHSDDFTPISTVQK ddPTM_KYSE-520_SHP099_60min_R1 1 TLTEPSVDFNHSDDFTPISTVQK 23 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 T(0.013)LT(0.832)EPS(0.155)VDFNHSDDFTPISTVQK 266.99 2.2708e-37 1349800000.0 448330.0 535860.0 407920.0 516220.0 504630.0 457410.0 419970.0 599880.0 562710.0 577560.0 True False 423460.2411763027 510116.48125774163 434215.1758950764 565281.3935927977 544341.5100480603 454555.134522376 462424.6661122184 597799.1562930441 460536.0487647398 572443.2677348813 0.7397418487458257 0.8911214613043447 0.758529622705209 0.9874889363789313 0.9509090956768211 0.7940614557683934 0.8078087247702311 1.0442941510317596 0.8045095029015703 1.0 19.126773195745656 -1.0000000000000002 0.0788577977286962 1.0757525612300114 0.3678962212427685 0.20583185683230631 0.09379447725559051 353.508911121841 2.03989023264801 2.8095853988646153 27.317098620775226 0.09999999999999995 1.0000000000000002 -0.7078563399872428 TLT(ph)PPLRR ddPTM_KYSE-520_SHP099_60min_R1 4 TLTPPLRR 8 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.317)LT(0.683)PPLRR;T(0.094)LT(0.906)PPLRR;T(0.014)LT(0.986)PPLRR;T(0.249)LT(0.751)PPLRR 131.45 0.0014069 18487200000.0 3460970.0 3275530.0 2834800.0 2413600.0 2633870.0 2929730.0 2481980.0 2855200.0 3752320.0 2956670.0 True False 3268983.0948273567 3118168.6221292326 3017535.743840372 2642987.818324701 2841140.584329679 2911444.4683418376 2732882.7601905013 2845295.9776086886 3070993.2762895734 2930476.204054454 1.1155125881263128 1.0640484361603406 1.029708325106161 0.901897041398255 0.9695149820356246 0.9935055825785977 0.9325729232707733 0.9709329745357037 1.047950251921755 1.0 21.482703691788913 -4.819865315403666 2.4798952660017215 0.9714396919132768 1.100739788073201 0.5909515074068112 0.03866532897074778 0.19216465842095357 2.3361715499969717 0.010691715043559372 0.03219960411154498 1.5140307109951902e-05 4.819865315403666 0.12930009615992422 TLTAVHDAILEDLVFPSEIVGK ddPTM_KYSE-520_SHP099_60min_R1 2 TLTAVHDAILEDLVFPSEIVGK 22 0 P62081;B5MCP9;A0A2R8Y623 P62081 RPS7 40S ribosomal protein S7 0 ; 166.91 2.587e-09 271240000.0 711920.0 409909.0 302089.0 636130.0 711300.0 445934.0 354378.0 444818.0 396340.0 223879.0 False True 672428.3784226647 390216.35635404714 321562.1402994897 696587.603940542 767275.2632566154 443150.7604951816 390201.986635988 443275.03017930145 324374.64691833616 221895.60623522647 3.030381672856734 1.7585582832153408 1.4491595654156804 3.139258211368572 3.457820892781646 1.997113723943716 1.7584935243032427 1.9976737606484902 1.4618344744261136 1.0 17.759521575385854 -7.558638761987792 0.9136811076663 1.058008898255556 2.452894047812957 0.39154454119240445 0.6084380385264344 0.6579514947137308 1.065579150295773 0.6224031570650299 0.23540476911280342 2.7628750083848766e-08 7.558638761987792 1.3948851495574008 TLTDEVNS(ph)PDSDRR ddPTM_KYSE-520_SHP099_60min_R1 7 TLTDEVNSPDSDRR 14 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.885)PDS(0.115)DRR;TLTDEVNS(1)PDSDRR;T(0.029)LT(0.001)DEVNS(0.97)PDSDRR;TLTDEVNS(0.95)PDS(0.05)DRR;TLTDEVNS(0.721)PDS(0.279)DRR;TLTDEVNS(1)PDSDRR;TLTDEVNS(0.5)PDS(0.5)DRR 182.57 4.6461e-09 7059930000.0 5609920.0 5136110.0 4893660.0 4730090.0 5130890.0 5026130.0 4351660.0 4872840.0 5984170.0 4879150.0 True False 5298726.5545017375 4889363.566141714 5209113.153732842 5179636.331446582 5534661.852229342 4994760.05832174 4791568.260908874 4855937.255369403 4897595.576649591 4835924.526921256 1.095700837555279 1.0110504287076787 1.0771700684603471 1.0710746833644542 1.1444888813748566 1.0328449152827461 0.9908277588358846 1.0041383459019548 1.0127526906975113 1.0 22.20536029830201 -6.515010095923144 22.50606423875787 1.003640481063586 1.0767541894257122 0.5870429037836147 0.03091452259577231 77.7555621365833 222402.73172894036 0.01182205861250084 0.009610033924563515 3.0548500971387076e-07 6.515010095923144 0.07311370836212627 TLTDEVNSPDS(ph)DRR ddPTM_KYSE-520_SHP099_60min_R1 2 TLTDEVNSPDSDRR 14 1 F8VXC8;Q8TAQ2-2;Q8TAQ2-3;Q8TAQ2 F8VXC8 SMARCC2 SWI/SNF complex subunit SMARCC2 1 TLTDEVNS(0.106)PDS(0.894)DRR;TLTDEVNS(0.017)PDS(0.983)DRR 249.86 8.907600000000002e-19 4278800000.0 2709200.0 2558900.0 2429200.0 2284000.0 2453000.0 2451000.0 2360300.0 2501100.0 3279800.0 2557400.0 True False 2558915.275343695 2435966.6030127946 2585790.118857423 2501070.6732903617 2646037.1443392024 2435702.399847715 2598902.158308138 2492424.2678611274 2684270.997029715 2534743.4256270924 1.009536211622927 0.9610308398019178 1.0201388009193482 0.9867155184243549 1.0439072915968117 0.960926607096387 1.0253117266356744 0.9833043623515878 1.058991205930687 1.0 21.27340829000089 -5.280136689813511 0.43846636102796643 1.0138570832096763 0.9843280151397216 0.050981057818604736 0.03049175102507442 7.309820947624264 2.0539024983569654 0.02474302903105806 0.1038183137016023 5.2464230837937565e-06 5.280136689813511 -0.0295290680699547 TLTEPS(ph)VDFNHSDDFTPISTVQK ddPTM_KYSE-520_SHP099_60min_R1 2 TLTEPSVDFNHSDDFTPISTVQK 23 0 Q6R327-3;Q6R327 Q6R327-3 RICTOR Rapamycin-insensitive companion of mTOR 1 TLT(0.083)EPS(0.916)VDFNHS(0.001)DDFTPISTVQK;T(0.011)LT(0.051)EPS(0.938)VDFNHSDDFTPISTVQK 246.4 1.1245999999999998e-28 2112970000.0 732210.0 938740.0 847870.0 774210.0 805000.0 880260.0 803600.0 968000.0 1089970.0 1004360.0 True False 691592.8516755522 893641.5213225331 902525.0568399666 847790.6856252748 868348.9201765417 874765.9708241319 884835.7303802151 964642.2339328985 892058.923907703 995462.1517802567 0.6947455013118549 0.8977152167205651 0.9066392481380794 0.8516553684227066 0.8723073183883594 0.8787536213805064 0.8888692842794672 0.9690395885044543 0.8961254049813645 1.0 19.925006939074756 -1.0000000000000002 0.17864166134714274 0.9811612727020259 0.15112824829748694 0.5689922412208186 0.050239958053704216 48.14873437202037 0.5390327806628363 0.11834137919702181 10.830214150456989 0.09999999999999995 1.0000000000000002 -0.830033024404539 TLTGDVKTS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 6 TLTGDVKTSPPR 12 1 H3BSX7;H3BNB8;H3BVH0;H3BRV2;H3BM79;Q9H8T0;Q9H8T0-2 H3BSX7 AKTIP AKT-interacting protein 1 TLTGDVKT(0.1)S(0.9)PPR;TLTGDVKT(0.179)S(0.821)PPR;TLTGDVKT(0.067)S(0.933)PPR;TLT(0.001)GDVKT(0.048)S(0.95)PPR;TLTGDVKT(0.049)S(0.95)PPR;TLTGDVKT(0.073)S(0.927)PPR 115.68 0.00010008 11534470000.0 7132840.0 7616290.0 6853090.0 4654270.0 5323190.0 6136700.0 4365990.0 5235530.0 8904890.0 5794650.0 True False 6737167.146235979 7250391.996115637 7294851.146731698 5096610.421442694 5742094.768192019 6098398.579006714 4807346.877156194 5217369.168411889 7287986.45000914 5743313.909169486 1.1730452579789792 1.262405661745221 1.270146689193691 0.8873988958370711 0.9997877286533964 1.0618257465033067 0.8370336278295752 0.9084248660136964 1.2689514390591654 1.0 22.453451985797482 -5.2517295528171255 24.812894640033292 0.987389119405931 1.2379198697498603 0.4823892756704079 0.11393767541099914 515.2176055910769 1316605.5089388725 0.030986849265063003 0.05279662697639201 5.601062865884833e-06 5.2517295528171255 0.25053075034392935 TLVITSTPAS(ph)PNR ddPTM_KYSE-520_SHP099_60min_R1 3 TLVITSTPASPNR 13 0 E9PK89;Q8TBN0 E9PK89 RAB3IL1 Guanine nucleotide exchange factor for Rab-3A 1 TLVITSTPAS(1)PNR;TLVITSTPAS(1)PNR;TLVITSTPAS(1)PNR 178.22 2.7017e-07 2037650000.0 2030480.0 2144820.0 1662430.0 1407410.0 1643410.0 2012240.0 1743830.0 2062280.0 2258460.0 2254920.0 True False 1917845.2267384697 2041779.6277595437 1769592.8977820477 1541169.8232467547 1772737.017276187 1999680.8637574713 1920113.3545407278 2055126.432019769 1848380.5951435238 2234943.163101211 0.8581181205866838 0.9135711643451221 0.7917842954567835 0.689578978423874 0.7931910961065936 0.8947345493040237 0.8591329686775457 0.9195430407134255 0.8270369581026425 1.0 21.091806711983477 -6.2665560708387416 24.10722367448243 0.8925011669955927 0.8074258541126297 0.3070861610035761 0.06772219433817235 390.76390172221727 1841070.9097733798 0.025066299045229525 0.022786155191617082 5.413073563271917e-07 6.2665560708387416 -0.085075312882963 TLVLDFETEGERNS(ph)PNPR ddPTM_KYSE-520_SHP099_60min_R1 2 TLVLDFETEGERNSPNPR 18 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 TLVLDFETEGERNS(1)PNPR;TLVLDFETEGERNS(1)PNPR 194.56 8.5459e-13 179028000.0 169436.0 164882.0 158188.0 139042.0 141019.0 142552.0 120875.0 153187.0 211230.0 145224.0 True False 160037.04731770794 156960.82122707253 168385.05158974908 152256.50987549836 152116.39301164707 141662.2800910204 133094.22462631707 152655.6300511146 172875.95667497627 143937.4283425624 1.1118515118724326 1.0904795440246107 1.1698489651281168 1.0577965135873975 1.0568230568189618 0.9841934910346787 0.9246672401952384 1.0605693863572676 1.201049363363238 1.0 17.135082262227538 -5.459300193802664 4.942814592640749 1.03423863758183 1.1208034145241281 0.23442029422976818 0.06940925742780563 0.33951031913163965 16.484764683320325 0.021299064031532852 0.03144015103512184 3.4729601988590607e-06 5.459300193802664 0.08656477694229814 TLVLLMGK ddPTM_KYSE-520_SHP099_60min_R1 2 TLVLLMGK 8 0 P07737;K7EJ44;CON__P02584 P07737 PFN1 Profilin-1 0 ; 141.78 0.0026565 43403000.0 193610.0 272570.0 217141.0 175649.0 283450.0 311210.0 202068.0 213986.0 230130.0 218486.0 False True 182870.06734803354 259475.3280640891 231138.25629788384 192342.6281492027 305755.90239011275 309267.6229525122 222495.0054336352 213243.73251070775 188344.19310520444 216550.3840195356 0.8444689127475126 1.1982215096911633 1.067364795238748 0.8882119005240414 1.4119388602078382 1.4281555045619883 1.0274514471124805 0.9847303364351017 0.8697476753872365 1.0 17.724343205247227 -6.990618426598911 24.984457469929527 0.9575615142613481 1.1473511810820398 0.18171521380631095 0.18082715386579556 359.22941739571064 956675.8948566791 0.0807929905904004 0.054392510460117595 1.0218368806437991e-07 6.990618426598911 0.18978966682069176 TLVLSSSPTS(ph)PTQEPLPGGK ddPTM_KYSE-520_SHP099_60min_R1 2 TLVLSSSPTSPTQEPLPGGK 20 0 H0YI02;J3KPG1;Q96QF0-5;Q96QF0-7;Q96QF0-6;Q96QF0-3;Q96QF0-4;Q96QF0-2;Q96QF0;Q96QF0-8 H0YI02 RAB3IP Rab-3A-interacting protein 1 TLVLSSSPT(0.018)S(0.737)PT(0.245)QEPLPGGK;TLVLSSS(0.013)PT(0.002)S(0.981)PT(0.004)QEPLPGGK 415.76 1.5192999999999996e-107 847920000.0 648370.0 911900.0 585030.0 520790.0 609480.0 881500.0 602240.0 846420.0 985980.0 938890.0 True False 612403.6236064488 868090.9552101942 622741.9698810962 570285.7250187771 657442.6085331673 875998.2315241764 663120.2964959935 843483.9665759136 806950.886533131 930572.1650453671 0.6580936402461521 0.9328572117433506 0.6692033066030256 0.6128334227480086 0.7064928795727689 0.9413544316377332 0.7125941666906244 0.906414352652373 0.8671556240818686 1.0 19.827758508779347 -7.560657227226393 0.6258510480213815 0.9945719476645833 0.7284262000127268 0.4014560230821369 0.10440661833924701 0.7840208566228358 0.6841287941545844 0.10488860021716229 0.05093660648195934 2.75006382170849e-08 7.560657227226393 -0.2661457476518565 TLVVHEK ddPTM_KYSE-520_SHP099_60min_R1 1 TLVVHEK 7 0 H7BYH4;P00441 H7BYH4 SOD1 Superoxide dismutase [Cu-Zn] 0 87.323 0.013739 772110000.0 1392700.0 1188700.0 927440.0 830430.0 1232600.0 1345500.0 955340.0 1051800.0 1091800.0 1112900.0 False True 1315444.1547213814 1131593.0677249234 987224.2663564674 909353.8175221157 1329598.6074653508 1337102.2354121162 1051915.0904199032 1048151.551291965 893556.642038247 1103040.5718230985 1.1925618951143597 1.0258852635444167 0.8950026785730912 0.8244065003149806 1.2053941091829457 1.212196785474683 0.9536504071480386 0.9502384391533184 0.8100850185060575 1.0 20.073054426156915 -6.982490135603285 24.814913881581454 0.9184858533983364 1.0492865731970467 0.19933765594873953 0.1287489146921095 412.9346283236035 585207.9716136053 0.05899429119340647 0.03976436116870692 1.0411417554455055e-07 6.982490135603285 0.13080071979871022 TLY(ph)DFPGNDAEDLPFK ddPTM_KYSE-520_SHP099_60min_R1 2 TLYDFPGNDAEDLPFK 16 0 P46109 P46109 CRKL Crk-like protein 1 T(0.006)LY(0.994)DFPGNDAEDLPFK;T(0.004)LY(0.996)DFPGNDAEDLPFK 237.67 1.0147999999999999e-19 120687000.0 400913.0 387441.0 317549.0 283184.0 357638.0 390445.0 320360.0 379697.0 446612.0 401778.0 True False 378673.55668974883 368827.75279920304 338018.7166363642 310097.72221762594 385782.0759181345 388008.08792678145 352745.1152123015 378379.9197289462 365518.5189723266 398218.55949855375 0.9509189053533406 0.9261942820134744 0.848827129157429 0.7787123799757307 0.9687697037624776 0.974359629082508 0.8858078228611105 0.9501815289709529 0.9178841875993831 1.0 18.6032009357578 TLY(ph)DFPGNDAEDLPFKK ddPTM_KYSE-520_SHP099_60min_R1 2 TLYDFPGNDAEDLPFKK 17 1 P46109 P46109 CRKL Crk-like protein 1 TLY(1)DFPGNDAEDLPFKK;T(0.001)LY(0.999)DFPGNDAEDLPFKK 164.66 4.864199999999999e-07 219190000.0 339610.0 331120.0 316170.0 335360.0 332610.0 280080.0 275890.0 323780.0 386160.0 308800.0 True False 320771.15630424896 315212.49817874754 336550.8240898866 367232.5135703392 358784.5147079746 278331.9168295991 303779.65362692566 322656.88275082037 316043.0783014193 306064.27224276494 1.04805161985656 1.0298898851177454 1.099608332667265 1.1998542361032478 1.1722521942168829 0.9093904191758488 0.9925354939369494 1.054212830483182 1.0326036292492817 1.0 18.22347511921507 -6.251950406376819 24.99880745465494 1.0008109633705204 1.1099067345002245 0.47586853628015113 0.058823225042126934 711.4385448076602 1874294.5393917658 0.02207923612037887 0.021813945563661775 5.598215258455402e-07 6.251950406376819 0.10909577112970403 TLYS(ph)FFSPSPAR ddPTM_KYSE-520_SHP099_60min_R1 1 TLYSFFSPSPAR 12 0 P13051 P13051 UNG Uracil-DNA glycosylase 1 TLYS(0.558)FFS(0.441)PSPAR 127.52 0.008614299999999998 0.0 238640.0 260060.0 257510.0 263280.0 246060.0 275410.0 210120.0 238000.0 301540.0 217670.0 True False 225402.1634829541 247566.32724198184 274109.5066305678 288302.05204198154 265423.52211011195 273691.06403184764 231360.98017358224 237174.43354961748 246787.9372048118 215741.6131446976 1.0447783355164644 1.147513099737228 1.2705453650553866 1.3363302880683374 1.2302843120584843 1.2686058106383187 1.072398490032652 1.0993448602358642 1.1439051261718873 1.0 17.718944950829524 -6.769889630525086 24.957302337170933 1.0871908254510667 1.2217656697140113 0.40550708226973375 0.08111370948330962 211.4858203379342 624603.9644849449 0.03625640917864268 0.024892901806630615 1.698675290640076e-07 6.769889630525086 0.13457484426294464 TLYSFFS(ph)PS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 3 TLYSFFSPSPAR 12 0 P13051 P13051 UNG Uracil-DNA glycosylase 2 TLYS(0.009)FFS(0.991)PS(1)PAR;TLYS(0.014)FFS(0.986)PS(1)PAR;TLY(0.001)S(0.018)FFS(0.982)PS(1)PAR 92.939 0.0025161999999999997 145624000.0 296602.0 289900.0 269328.0 243689.0 255343.0 242115.0 234095.0 254737.0 324165.0 261392.0 True False 280148.89579857176 275972.76885122847 286689.31382003665 266849.1292922309 275437.04139706737 240603.8704770007 257759.60714703376 253853.37680306283 265304.8075346482 259076.27023989856 1.081337536390965 1.0652182409283728 1.106582681441913 1.030002203772406 1.063150404095362 0.9286989898928495 0.9949178553032063 0.9798403248896572 1.0240413268609363 1.0 17.983017354196352 -6.145070062899241 7.611634484481931 0.9849524895673896 1.0696370792917025 0.6830959287051189 0.028546880093833375 0.1618087711826378 9.630825079501012 0.009376106884082048 0.0093860208413549 7.160278871320603e-07 6.145070062899241 0.08468458972431292 TLYSFFS(ph)PSPAR ddPTM_KYSE-520_SHP099_60min_R1 4 TLYSFFSPSPAR 12 0 P13051 P13051 UNG Uracil-DNA glycosylase 1 TLYS(0.016)FFS(0.964)PS(0.02)PAR;TLYS(0.052)FFS(0.933)PS(0.015)PAR;TLYS(0.076)FFS(0.894)PS(0.029)PAR;TLYS(0.001)FFS(0.989)PS(0.01)PAR 114.51 0.0012687000000000002 2648789000.0 754721.0 772513.0 727484.0 718847.0 703845.0 791019.0 665855.0 775341.0 878454.0 704671.0 True False 712855.1216309862 735400.3159143468 774378.7826555549 787166.002750768 759233.5971697617 786081.9570074002 733166.1215185635 772651.5230369491 718948.8976232517 698428.1631657423 1.020656324051784 1.0529362283746149 1.1087450699948207 1.1270536388206436 1.0870603982067513 1.1255015167835623 1.0497373390491094 1.1062720030285964 1.0293813101185607 1.0 19.413752209292408 -7.926593017821221 4.4382696297299296 1.0005452495346947 1.0859977392420312 0.429426936631395 0.03303317010379409 0.17992085637206381 6.347235196637945 0.03306889254931333 0.008670345930466516 1.1841507167187626e-08 7.926593017821221 0.08545248970733654 TLYSFFSPS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 2 TLYSFFSPSPAR 12 0 P13051 P13051 UNG Uracil-DNA glycosylase 1 TLYSFFSPS(1)PAR;TLYSFFSPS(1)PAR 160.18 3.8141e-06 2690500000.0 1614030.0 1631510.0 1351130.0 1185840.0 1250470.0 1445790.0 1303630.0 1183800.0 1593550.0 1330940.0 True False 1524496.5384109642 1553129.810653565 1438226.0016844345 1298541.877064203 1348874.8747989577 1436766.2883214294 1435413.6426027366 1179693.6741009974 1304201.490126444 1319148.90705565 1.1556667562372862 1.1773726243841283 1.0902681221141028 0.9843785414359005 1.0225342018511439 1.0891615651854667 1.0881361724406007 0.8942839339753405 0.988668893368097 1.0 20.331175996192098 -3.0035331557075007 0.33897371984143676 0.9790733358442432 1.6238040665128448 0.5354578739068935 0.0560215209216752 12.964382521716741 0.6132830699196116 0.05634666789471696 4.050271540424018 0.0009918976110780563 3.0035331557075007 0.6447307306686016 TMCPLLSMKPGEYSYFS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 TMCPLLSMKPGEYSYFSPR 19 1 C9J470;E9PHA2;Q15003;Q15003-2 C9J470 NCAPH Condensin complex subunit 2 1 TMCPLLSMKPGEYS(0.031)YFS(0.968)PR;TMCPLLSMKPGEYS(0.006)Y(0.002)FS(0.992)PR;TMCPLLSMKPGEYS(0.182)Y(0.01)FS(0.808)PR 67.36399999999999 0.01057 3038900000.0 910170.0 801060.0 716560.0 733280.0 678580.0 760270.0 614720.0 714210.0 897610.0 615490.0 True False 859681.0557210869 762575.8751844261 762750.6041365379 802970.7107313293 731980.3854079483 755524.8729221626 676861.8966890562 711732.5722078673 734626.6509067146 610037.2374439742 1.4092271798408698 1.2500480763757655 1.2503344997961519 1.3162650760398442 1.1998945973772188 1.2384897618508903 1.1095419347269257 1.1667034871346402 1.2042324727335725 1.0 19.21853778372887 -1.0000000006881231 0.05888229083529614 0.6763984463500898 2.3272927240559556 0.7683162886765379 0.05071816948769345 168.61685903962393 0.7443510003839159 4.302969953082156 24.01321803443204 0.09999999984155379 1.0000000006881231 1.6508942777058657 TMFAQVES(ph)DDEEAK ddPTM_KYSE-520_SHP099_60min_R1 2 TMFAQVESDDEEAK 14 0 Q9NW82 Q9NW82 WDR70 WD repeat-containing protein 70 1 TMFAQVES(1)DDEEAK;T(0.001)MFAQVES(0.999)DDEEAK 200.48 4.7887e-07 378030000.0 700840.0 734550.0 599660.0 787260.0 689680.0 692110.0 741910.0 734690.0 731360.0 726060.0 True False 661963.0081100966 699261.1154179719 638315.0430899244 862080.9537016508 743953.8922575867 687790.2847648307 816909.5031438346 732141.5318679354 598563.4600852656 719627.6732661327 0.919868749774009 0.9716984788040122 0.8870073606158594 1.1979541445216713 1.0338038959522582 0.9557585266881088 1.1351835587925274 1.017389351558712 0.8317682633973761 1.0 19.456891140898588 TMFAQVES(ph)DDEEAKNEPEWK ddPTM_KYSE-520_SHP099_60min_R1 20 TMFAQVESDDEEAKNEPEWK 20 1 Q9NW82 Q9NW82 WDR70 WD repeat-containing protein 70 1 T(0.011)MFAQVES(0.989)DDEEAKNEPEWK;T(0.02)MFAQVES(0.98)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;T(0.005)MFAQVES(0.995)DDEEAKNEPEWK;T(0.005)MFAQVES(0.995)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;TMFAQVES(1)DDEEAKNEPEWK;T(0.099)MFAQVES(0.901)DDEEAKNEPEWK;T(0.143)MFAQVES(0.857)DDEEAKNEPEWK 317.15 8.218899999999999e-54 46003140000.0 16810760.0 16357730.0 15442130.0 14878340.0 16454690.0 14942560.0 14669130.0 15821140.0 19459060.0 16065030.0 True False 15878233.631380748 15571880.097346708 16437554.408081602 16292372.960263956 17749580.48862083 14849297.940378804 16152028.81731252 15766260.15802183 15925785.226983674 15922706.332604203 0.9972069634210114 0.9779669217073278 1.0323342065552743 1.0232163188805916 1.1147338974829812 0.932586309776534 1.014402230369516 0.9901746492515519 1.0001933650169235 1.0 23.924582231298995 -9.00428376454348 12.576985905753945 0.9999999999999974 1.0098193859237916 0.003750128501338934 0.043967748232395035 0.0 0.0 0.04263760097623038 0.010341137202819798 9.90184754676446e-10 9.00428376454348 0.009819385923794166 TMIIS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 6 TMIISPER 8 0 O75533;B4DGZ4;A0A494C1M2;O75533-2 O75533 SF3B1 Splicing factor 3B subunit 1 1 TMIIS(1)PER;TMIIS(1)PER;TMIIS(1)PER;TMIIS(1)PER;TMIIS(1)PER;T(0.001)MIIS(0.999)PER 115.82 0.0010107 7472860000.0 7168590.0 6163860.0 5065900.0 5969660.0 5886440.0 6654370.0 6323000.0 6688010.0 6286520.0 6948970.0 True False 6770934.022470116 5867738.913457511 5392456.019726583 6537014.691556276 6349669.338737902 6612837.608516773 6962190.546533223 6664810.854303273 5145046.438272839 6887407.532016856 0.9830889185799881 0.8519517519735393 0.7829442347732685 0.9491255833444238 0.9219244409773606 0.9601345031169254 1.0108579337245154 0.9676806292238672 0.747022216175758 1.0 22.7155296140067 TMIIS(ph)PERLDPFADGGK ddPTM_KYSE-520_SHP099_60min_R1 13 TMIISPERLDPFADGGK 17 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.242)MIIS(0.758)PERLDPFADGGK;TMIIS(1)PERLDPFADGGK;TMIIS(1)PERLDPFADGGK;T(0.005)MIIS(0.995)PERLDPFADGGK;T(0.001)MIIS(0.999)PERLDPFADGGK;T(0.001)MIIS(0.999)PERLDPFADGGK;TMIIS(1)PERLDPFADGGK;TMIIS(1)PERLDPFADGGK;TMIIS(1)PERLDPFADGGK;TMIIS(1)PERLDPFADGGK;T(0.036)MIIS(0.964)PERLDPFADGGK;T(0.022)MIIS(0.978)PERLDPFADGGK;T(0.159)MIIS(0.841)PERLDPFADGGK 223.15 1.7934e-18 7226548000.0 7804460.0 8341400.0 6883380.0 5499907.0 6567600.0 7980990.0 6421076.0 6986210.0 8873510.0 7659440.0 True False 7371531.045994695 7940666.623303341 7327093.688597413 6022616.507672668 7084432.755467655 7931177.681012084 7070181.025742754 6961976.468103665 7262304.266983712 7591583.320554142 0.9710136521898328 1.0459829376836396 0.9651601489717401 0.7933281179127007 0.9331956795213745 1.044733008401356 0.9313183728880778 0.9170651462461299 0.9566257736144567 1.0 22.855969378613214 -4.993674832203474 24.034621324132125 0.9351384193941897 1.007766662825829 0.1558870308674003 0.0632029621355974 178.22567720234332 677202.8729531865 0.017254725598801014 0.03574968072861966 1.0146708123470723e-05 4.993674832203474 0.07262824343163932 TMIIS(ph)PERLDPFADGGKT(ph)PDPK ddPTM_KYSE-520_SHP099_60min_R1 20 TMIISPERLDPFADGGKTPDPK 22 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 T(0.038)MIIS(0.962)PERLDPFADGGKT(1)PDPK;T(0.477)MIIS(0.523)PERLDPFADGGKT(1)PDPK;T(0.448)MIIS(0.552)PERLDPFADGGKT(1)PDPK;T(0.473)MIIS(0.527)PERLDPFADGGKT(1)PDPK;T(0.015)MIIS(0.985)PERLDPFADGGKT(1)PDPK;T(0.003)MIIS(0.997)PERLDPFADGGKT(1)PDPK;T(0.015)MIIS(0.985)PERLDPFADGGKT(1)PDPK;T(0.118)MIIS(0.882)PERLDPFADGGKT(1)PDPK;T(0.004)MIIS(0.996)PERLDPFADGGKT(1)PDPK;T(0.184)MIIS(0.816)PERLDPFADGGKT(1)PDPK;T(0.156)MIIS(0.844)PERLDPFADGGKT(1)PDPK;T(0.428)MIIS(0.574)PERLDPFADGGKT(0.998)PDPK;T(0.427)MIIS(0.573)PERLDPFADGGKT(1)PDPK;T(0.429)MIIS(0.571)PERLDPFADGGKT(1)PDPK;T(0.159)MIIS(0.841)PERLDPFADGGKT(1)PDPK;T(0.437)MIIS(0.563)PERLDPFADGGKT(1)PDPK;T(0.466)MIIS(0.534)PERLDPFADGGKT(1)PDPK;T(0.372)MIIS(0.628)PERLDPFADGGKT(1)PDPK;T(0.013)MIIS(0.987)PERLDPFADGGKT(1)PDPK;T(0.444)MIIS(0.556)PERLDPFADGGKT(1)PDPK 161.04 8.1895e-09 16714314000.0 7184584.0 7269636.0 7633303.0 6442212.0 6429558.0 6179847.0 5773812.0 6250366.0 8922283.0 6960439.0 True False 6786040.803406882 6920391.774613899 8125357.925096627 7054477.89155833 6935527.635419197 6141276.282575156 6357485.263934861 6228684.939192388 7302221.319650991 6898774.9255996 0.9836588200936386 1.0031334330004136 1.17779721946653 1.0225696544151563 1.0053274255525018 0.8901980929666861 0.9215382923051815 0.9028682637665597 1.0584808749962697 1.0 22.717908762275876 -5.918065529922517 3.041923305918198 0.9465911640000791 1.0536548627876772 0.2868922264800021 0.06722601455180989 0.3026855774930112 5.656743635307797 0.022784243523170322 0.026009369601956524 1.207631603972421e-06 5.918065529922517 0.10706369878759803 TMIIS(ph)PERLDPFADGGKTPDPK ddPTM_KYSE-520_SHP099_60min_R1 5 TMIISPERLDPFADGGKTPDPK 22 2 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 T(0.037)MIIS(0.963)PERLDPFADGGKTPDPK;T(0.002)MIIS(0.998)PERLDPFADGGKTPDPK;T(0.042)MIIS(0.954)PERLDPFADGGKT(0.004)PDPK;TMIIS(1)PERLDPFADGGKTPDPK;T(0.186)MIIS(0.814)PERLDPFADGGKTPDPK 150.14 3.2586999999999994e-07 1110580000.0 2536720.0 3042100.0 2508820.0 1693370.0 2176980.0 2274320.0 1549400.0 1662680.0 3246260.0 1944390.0 True False 2396003.084774052 2895952.94971481 2670542.551453931 1854307.3756697432 2348295.940678176 2260125.125263832 1706028.4726867897 1656912.5511524302 2656821.0155551224 1927164.2173125274 1.2432791472827005 1.502701702169045 1.3857368912640255 0.9621947932675998 1.2185240466704628 1.1727724627513196 0.8852532946392517 0.859767183443781 1.3786168255345241 1.0 20.8780480809724 -5.248993046330506 23.948068385867288 1.0653209543705804 1.3897855685093747 0.4377571627697012 0.1603060997401701 398.6663906993514 767073.4341305823 0.04372806151063907 0.07497867770492954 5.636466805350253e-06 5.248993046330506 0.32446461413879435 TMLAGVILEDYLDIK ddPTM_KYSE-520_SHP099_60min_R1 2 TMLAGVILEDYLDIK 15 0 P51800-2;P51800-3;P51800 P51800-2 CLCNKA Chloride channel protein ClC-Ka 0 ; 77.527 0.013651 1666610000.0 2225300.0 1846570.0 1207160.0 891060.0 2138100.0 2052000.0 1588600.0 1675650.0 1365670.0 1569640.0 False True 2101858.172974427 1757858.0054419227 1284975.4651242895 975746.0744930421 2306356.3058751137 2039192.7068492472 1749191.1912419256 1669837.5612496494 1117698.7537391223 1555734.2107614405 1.3510393732009602 1.1299218036617928 0.8259607947397194 0.6271933005930825 1.4824873618651657 1.3107590568771912 1.1243509200622381 1.0733437303743305 0.7184381149477163 1.0 20.569164173626426 -6.828851724949025 0.01774992092440504 1.74464392432493e-05 2.115737636070464 0.03903680777493357 0.2588884903053189 2690.2968759367054 30.884423476593636 1791.6301254396924 1881.4810527234877 1.4830243268395028e-07 6.828851724949025 2.115720189631221 TMPLASLFVDQPGS(ph)CEEPKLSPDGLEHR ddPTM_KYSE-520_SHP099_60min_R1 1 TMPLASLFVDQPGSCEEPKLSPDGLEHR 28 1 Q5TCX8;Q5TCX8-3 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 TMPLASLFVDQPGS(0.813)CEEPKLS(0.187)PDGLEHR 67.194 0.013338999999999998 17896000.0 54179.0 69056.0 53878.0 77434.0 57649.0 58250.0 51328.0 57515.0 81721.0 56896.0 True False 51173.58286684112 65738.44610483083 57351.06208784797 84793.30407861891 62185.64832205902 57886.440143259584 56516.735153006055 57315.49388910188 66882.52641876506 56391.945704418154 0.9074626212592591 1.165741761233119 1.0170080384964384 1.5036421073865445 1.1027398956583077 1.0265019129979114 1.0022128948917988 1.0163773066019848 1.1860297704451257 1.0 15.783201501002033 -5.999414310158255 24.999951068747563 1.0467331797782335 1.1606684174473758 0.09094915918106106 0.15076754947056126 49.056118117135725 2093776.6212321327 0.04765204382970458 0.053533963650703835 1.0013495104695683e-06 5.999414310158255 0.11393523766914226 TMPLASLFVDQPGSCEEPKLS(ph)PDGLEHR ddPTM_KYSE-520_SHP099_60min_R1 3 TMPLASLFVDQPGSCEEPKLSPDGLEHR 28 1 Q5TCX8;Q5TCX8-3 Q5TCX8 MLK4 Mitogen-activated protein kinase kinase kinase MLK4 1 TMPLASLFVDQPGS(0.001)CEEPKLS(0.999)PDGLEHR;TMPLASLFVDQPGSCEEPKLS(1)PDGLEHR;TMPLASLFVDQPGSCEEPKLS(1)PDGLEHR 199.86 7.030199999999999e-16 869410000.0 460060.0 505020.0 397936.0 377846.0 372159.0 451160.0 408705.0 450860.0 567640.0 462305.0 True False 434539.5546931271 480758.08114952577 423587.5912801119 413756.3702364581 401445.796004947 448344.1430906949 450020.8899764137 449296.07189151517 464570.8850399259 458209.33736784797 0.9483428626516206 1.0492105724235292 0.9244412034756465 0.9029854620886888 0.8761187589738454 0.9784701151359704 0.9821294619649782 0.9805476127406428 1.0138834963700685 1.0 18.805647332549135 -6.503272246021506 24.23432557746974 0.9907735101930445 0.9417261328838281 0.26260188144019114 0.04301059154376381 879.9499284154501 1087651.748645839 0.016987515594863837 0.014752158338674467 3.138540621277849e-07 6.503272246021506 -0.04904737730921638 TMPLRWS(ph)FGSK ddPTM_KYSE-520_SHP099_60min_R1 2 TMPLRWSFGSK 11 1 V9GZ20;V9GXZ5;Q70EL4-2;Q70EL4-3;Q70EL4-4;Q70EL4 V9GZ20 USP43 Ubiquitin carboxyl-terminal hydrolase 43 1 TMPLRWS(1)FGSK;TMPLRWS(0.997)FGS(0.003)K 170.74 7.994199999999999e-06 1585810000.0 749730.0 745220.0 781910.0 694750.0 784160.0 673850.0 517850.0 576110.0 907110.0 624120.0 True False 708140.9823502974 709418.5126019743 832313.169700234 760778.8311157953 845868.9307399233 669644.2521980344 570199.331728963 574111.6088750842 742401.6903822266 618590.7823580132 1.1447648470462601 1.1468300738296389 1.3454988231921756 1.2298580140747877 1.3674127627889086 1.0825318955536485 0.9217714650635653 0.9280959646482634 1.2001499400819668 1.0 19.238625810376984 -6.46970167530494 6.387420645225314 1.0055695048811204 1.2449289170960933 0.5656881322209429 0.09797714490374536 0.1660785370916279 15.51757665351601 0.0357325888083155 0.031002636698662874 3.3907699424898676e-07 6.46970167530494 0.23935941221497292 TMS(ph)AIYQK ddPTM_KYSE-520_SHP099_60min_R1 1 TMSAIYQK 8 0 Q5VSL9;Q5VSL9-2;Q9ULQ0-2;Q9ULQ0 Q5VSL9;Q9ULQ0 STRIP1;STRIP2 Striatin-interacting protein 1;Striatin-interacting protein 2 1 T(0.001)MS(0.989)AIY(0.009)QK 68.016 0.0479 0.0 2082800.0 1775600.0 1611500.0 1400400.0 1275500.0 1418100.0 1536700.0 1477700.0 1769900.0 1942100.0 True False 1967262.9320411345 1690297.510770065 1715379.868491167 1533493.5949543866 1375874.5933977382 1409249.111882513 1692044.6327467337 1472574.2035977715 1448530.7755481722 1924894.5049309342 1.0220107787734167 0.8781247525202497 0.8911552628452827 0.7966637085960245 0.7147792203017926 0.7321175826895912 0.8790323980936529 0.7650155371245179 0.752524760103747 1.0 20.87634794947793 -4.3008083030080675 1.1067124174782903 0.7945901291649078 1.111557734294445 0.373684454851115 0.08174622390142636 1.5638031458394457 1.6687638578127635 0.025083753872757495 0.5718339315797814 5.0025529825738915e-05 4.3008083030080675 0.31696760512953714 TMS(ph)QGEITK ddPTM_KYSE-520_SHP099_60min_R1 2 TMSQGEITK 9 0 H3BV44;H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4 H3BV44 MYO9A Unconventional myosin-IXa 1 TMS(1)QGEITK;TMS(1)QGEITK 147.39 0.00031514 1374080000.0 1365080.0 1297430.0 1329530.0 982260.0 1071300.0 1206790.0 1060610.0 1257080.0 1516540.0 1286480.0 True False 1289356.2911804852 1235099.5153178673 1415233.6311232145 1075613.6950727624 1155605.2151368088 1199257.975973979 1167826.8093560962 1252719.4828846788 1241174.564862323 1275082.7880662936 1.011194177545003 0.968642606485919 1.109915092861903 0.8435638102400921 0.9062981838922972 0.9405334204163281 0.9158831256181768 0.9824612916189313 0.973407041863224 1.0 20.282159490177087 -5.259503503036697 24.999901218757156 0.9346506950702339 1.0237898173375675 0.3871062051630564 0.05306919080639336 188.24397959045882 2430961.063278286 0.014792136407280013 0.024020037012551242 5.50169482803719e-06 5.259503503036697 0.08913912226733356 TNAVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 TNAVSPK 7 0 Q6XZF7 Q6XZF7 DNMBP Dynamin-binding protein 1 TNAVS(1)PK;TNAVS(1)PK;TNAVS(1)PK 107.51 0.0034921 1209540000.0 3727100.0 2965330.0 2800140.0 2697610.0 3252950.0 3737060.0 4619600.0 1926780.0 3443830.0 3903500.0 True False 3520350.3332103556 2822871.0957489256 2980641.5047824094 2953990.0433339756 3508938.6582463146 3713735.622347975 5086594.250951274 1920096.449893833 2818517.283889522 3868918.02687705 0.909905639963105 0.729628044879389 0.7704069933961232 0.7635183849367844 0.9069560621005696 0.9598899735142912 1.3147330120760197 0.4962877053881947 0.7285027142755464 1.0 21.883498731170487 -5.766635458341121 24.25439090131021 0.899500973311004 0.7871723002307324 0.06511409270550195 0.19931303557346058 288.16203336821525 1345089.5147416715 0.06472258606938261 0.07566379791304298 1.7114512843331568e-06 5.766635458341121 -0.11232867308027161 TNGHS(ph)PSQPR ddPTM_KYSE-520_SHP099_60min_R1 12 TNGHSPSQPR 10 0 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5;C9JVY5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 T(0.001)NGHS(0.996)PS(0.003)QPR;T(0.012)NGHS(0.638)PS(0.351)QPR;TNGHS(1)PSQPR;TNGHS(0.991)PS(0.009)QPR;TNGHS(0.996)PS(0.004)QPR;TNGHS(0.983)PS(0.017)QPR;TNGHS(0.994)PS(0.006)QPR;T(0.001)NGHS(0.956)PS(0.043)QPR;T(0.004)NGHS(0.706)PS(0.29)QPR;TNGHS(0.844)PS(0.156)QPR;TNGHS(0.987)PS(0.013)QPR;T(0.042)NGHS(0.924)PS(0.034)QPR 172.3 3.8979e-05 13559440000.0 2436162.0 2582520.0 2379802.0 3125887.0 2446533.0 2404056.0 2277955.0 2324858.0 2836926.0 2324708.0 True False 2301023.2374914554 2458451.8627584483 2533207.8447378273 3422970.3606478 2639061.2282313984 2389051.394764704 2508232.922098384 2316793.6102239345 2321811.751484702 2304112.895715454 0.998659068212437 1.066984116676744 1.0994286996302916 1.4855914252347984 1.1453697573321115 1.036863861665457 1.0885894205802567 1.005503512667309 1.0076814186501708 1.0 21.13577997625134 -6.236149532173879 5.277913005105838 1.03134301123004 1.1698778270063754 0.22203396745177795 0.12261127951291735 0.32273856606968193 27.166346450437665 0.04539280125166283 0.04392629545822588 5.805644886234728e-07 6.236149532173879 0.13853481577633553 TNILQYAS(ph)TRPPTLSPIPHIPR ddPTM_KYSE-520_SHP099_60min_R1 1 TNILQYASTRPPTLSPIPHIPR 22 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 T(0.001)NILQY(0.025)AS(0.29)T(0.241)RPPT(0.222)LS(0.222)PIPHIPR 63.857 0.02206 322780000.0 757190.0 907410.0 775020.0 679690.0 740560.0 873630.0 582620.0 645700.0 738830.0 615380.0 True False 715187.1612791574 863816.6615498218 824979.0292758452 744287.5332437496 798837.8587899882 868177.3511134067 641516.915423247 643460.2174075127 604677.0963886412 609928.2119583957 1.172575964280763 1.4162595607378534 1.352583817408529 1.2202871069923864 1.3097243956383484 1.423409073546227 1.05179085480146 1.054976970718325 0.9913906006202043 1.0 19.218279923101964 -6.821799006279131 7.71189170356508 1.0269029972817312 1.317182792263574 0.7844996773901076 0.0748064951694353 0.11192838155006549 12.286194071829033 0.031227654184708045 0.021082051005166164 1.507304493063081e-07 6.821799006279131 0.29027979498184275 TNILQYAST(ph)RPPTLSPIPHIPR ddPTM_KYSE-520_SHP099_60min_R1 1 TNILQYASTRPPTLSPIPHIPR 22 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TNILQYAS(0.378)T(0.607)RPPT(0.014)LS(0.001)PIPHIPR 125.91 0.00019093 9365100000.0 473510.0 523560.0 468050.0 383830.0 308460.0 544800.0 293990.0 325400.0 399790.0 346690.0 True False 447243.4563812172 498407.39172041835 498221.2519064785 420309.08779730246 332734.0471026791 541399.7011167009 323709.3782659024 324271.26334893063 327198.2138857586 343618.5963207386 1.301569417866295 1.4504668753585084 1.4499251706430683 1.2231849274099817 0.9683237480898743 1.5755832394220903 0.9420601263493532 0.9436953262164284 0.9522133475580205 1.0 18.390448590347763 -6.552733350515381 0.6477715627574004 0.9196841931723517 1.3905357913283374 0.4468866010538569 0.17610308301417052 0.7167030795643435 0.6272651868497874 0.1517378062409916 0.12372909560502524 2.800700374622528e-07 6.552733350515381 0.47085159815598565 TNILQYASTRPPT(ph)LSPIPHIPR ddPTM_KYSE-520_SHP099_60min_R1 2 TNILQYASTRPPTLSPIPHIPR 22 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TNILQYAS(0.005)T(0.025)RPPT(0.485)LS(0.485)PIPHIPR;TNILQYAS(0.007)T(0.005)RPPT(0.553)LS(0.434)PIPHIPR 178.49 1.1964000000000001e-09 10174170000.0 767800.0 1113630.0 810950.0 699110.0 771160.0 871930.0 629470.0 666650.0 777330.0 533210.0 True False 725208.6034286456 1060129.5432072901 863225.1345658776 765553.2042049137 831845.9046998045 866487.9614439888 693102.9706351837 664337.5467472802 636186.4668946613 528486.1742311023 1.3722376076985474 2.0059740347033275 1.6333920860309903 1.448577543809394 1.5740163986504698 1.6395659975488428 1.311487422814009 1.2570575714943324 1.2037901801693351 1.0 19.01150620407858 -7.236948046836909 0.6166507408819905 1.0020190945014271 1.6744441166559771 0.631339971219215 0.16284774842020436 0.47256238079982127 0.369666663646564 0.15460457834461225 0.08591408423106232 5.794980156456594e-08 7.236948046836909 0.67242502215455 TNILQYASTRPPTLS(ph)PIPHIPR ddPTM_KYSE-520_SHP099_60min_R1 3 TNILQYASTRPPTLSPIPHIPR 22 1 A0A3B3IS71;P06400 A0A3B3IS71 RB1 Retinoblastoma-associated protein 1 TNILQY(0.001)AS(0.005)T(0.004)RPPT(0.165)LS(0.825)PIPHIPR;TNILQYAS(0.002)T(0.009)RPPT(0.216)LS(0.773)PIPHIPR;TNILQYASTRPPT(0.001)LS(0.999)PIPHIPR 258.09 4.8171e-36 11481120000.0 1271390.0 1621160.0 1305250.0 1162980.0 1218380.0 1452710.0 966670.0 1167320.0 1283360.0 986480.0 True False 1200863.462246871 1543277.0401892297 1389388.5034738404 1273509.2695373117 1314259.5743660808 1443643.0980345875 1064390.4373900492 1163270.8393745366 1050334.1748728754 977740.5546698262 1.2282025702129042 1.5784116070652094 1.4210196118366225 1.3025022470990415 1.344180281864133 1.4765093778094254 1.0886225720170561 1.1897541058500558 1.074246301696633 1.0 19.89909216850235 -6.769418338690074 24.999800607443653 1.103968509245874 1.3953904962920098 0.6893742064090368 0.0996112151130388 107.99684216288921 338373.82115535036 0.04067192312200823 0.02797390036254293 1.700519675893494e-07 6.769418338690074 0.29142198704613587 TNKPST(ph)PTTATR ddPTM_KYSE-520_SHP099_60min_R1 3 TNKPSTPTTATR 12 1 A0A2R8Y7K2;A0A2R8Y5N9;A0A2R8Y481;A0A2R8YFW8;A0A2R8YGN6;A0A2R8YCL5;A0A2R8Y4I8;A0A2U3TZR0;Q9UBP0-4;Q9UBP0-3;Q9UBP0-2;Q9UBP0;A0A2R8YEA0 A0A2R8Y7K2 SPAST Spastin 1 T(0.001)NKPS(0.403)T(0.574)PT(0.019)T(0.001)AT(0.002)R;TNKPS(0.051)T(0.941)PT(0.006)T(0.002)ATR;T(0.001)NKPS(0.127)T(0.865)PT(0.004)T(0.002)ATR 136.83 0.00013434 2566030000.0 2718030.0 2915060.0 2195490.0 1777700.0 1806830.0 2533010.0 1766790.0 2265410.0 2748940.0 2331400.0 True False 2567255.4576415266 2775016.142005737 2337014.798308205 1946652.0735150075 1949017.2415435808 2517200.545017646 1945394.3754087377 2257551.821460668 2249801.7911381377 2310745.609801755 1.1110073937830736 1.2009180630851932 1.0113682736840528 0.8424346086638312 0.8434581605505213 1.0893455923231652 0.8418903262898066 0.9769798163348451 0.9736259074105325 1.0 21.139927011440985 -4.927411770543123 4.726950841163746 0.9348516611432252 1.1528400359437845 0.545900123916276 0.07834625390973127 0.1432925476267364 6.033374331017275 0.02057317783285021 0.044682345647801026 1.1819204021790146e-05 4.927411770543123 0.21798837480055933 TNKS(ph)PEAKPLPGK ddPTM_KYSE-520_SHP099_60min_R1 4 TNKSPEAKPLPGK 13 2 P46087-2;P46087;P46087-4;P46087-3;F5H359;F5GWB7;F5H709;F5H5X6 P46087-2 NOP2 Probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase 1 T(0.006)NKS(0.994)PEAKPLPGK;T(0.043)NKS(0.957)PEAKPLPGK;T(0.396)NKS(0.604)PEAKPLPGK;TNKS(1)PEAKPLPGK 162.41 6.3657e-07 24524100000.0 19353500.0 14788200.0 15418300.0 14937000.0 14734500.0 15195800.0 16529500.0 16882100.0 15506900.0 15636800.0 True False 18279922.774754263 14077752.67445925 16412188.288152257 16356607.989027176 15894021.322163075 15100957.375604212 18200463.17237404 16823539.93541177 12691237.857137673 15498270.11724633 1.1794814928675514 0.908343484012042 1.0589690438992239 1.0553828179072513 1.0255351856641315 0.9743640587861485 1.1743544947071696 1.0855108220555978 0.8188809306539948 1.0 23.88560385825642 -7.746581556008768 24.999963525676822 0.9094404248212169 1.0527591215475132 0.3149558163902293 0.0872393343081112 243.8924455461693 410380.77256528195 0.057285597173345804 0.021457072787327298 1.7923319393726613e-08 7.746581556008768 0.14331869672629627 TNPPTQKPPS(ph)PPMSGR ddPTM_KYSE-520_SHP099_60min_R1 17 TNPPTQKPPSPPMSGR 16 1 B6VEX4;A0A0A0MRT6;Q8IZP0-11;Q8IZP0-10;Q8IZP0-8;Q8IZP0-7;Q8IZP0-2;Q8IZP0-4;Q8IZP0-3;Q8IZP0-5;Q8IZP0-6;Q8IZP0-9;Q8IZP0-12;Q8IZP0 B6VEX4 ABI1 Abl interactor 1 1 TNPPTQKPPS(0.95)PPMS(0.05)GR;TNPPTQKPPS(1)PPMSGR;TNPPT(0.015)QKPPS(0.897)PPMS(0.088)GR;TNPPT(0.023)QKPPS(0.935)PPMS(0.041)GR;TNPPT(0.01)QKPPS(0.965)PPMS(0.026)GR;TNPPTQKPPS(1)PPMSGR;TNPPTQKPPS(0.985)PPMS(0.015)GR;TNPPT(0.001)QKPPS(0.997)PPMS(0.002)GR;TNPPTQKPPS(0.987)PPMS(0.013)GR;TNPPTQKPPS(0.587)PPMS(0.413)GR;TNPPT(0.002)QKPPS(0.997)PPMS(0.001)GR;TNPPT(0.002)QKPPS(0.945)PPMS(0.053)GR;TNPPT(0.001)QKPPS(0.991)PPMS(0.009)GR;TNPPT(0.004)QKPPS(0.973)PPMS(0.023)GR;TNPPTQKPPS(0.79)PPMS(0.21)GR;TNPPT(0.001)QKPPS(0.959)PPMS(0.04)GR;TNPPTQKPPS(0.997)PPMS(0.002)GR 155.76 1.7476e-06 151872310000.0 12402230.0 14029680.0 10190030.0 8649860.0 8999710.0 13273790.0 9344950.0 12440100.0 14635760.0 12794840.0 True False 11714253.578667447 13355673.113821005 10846895.638424478 9471940.093724754 9707935.975654697 13190943.352947613 10289628.743923083 12396948.19664116 11978274.921485355 12681487.67183489 0.9237286572209006 1.0531629615887619 0.8553330586375153 0.7469107993348114 0.7655202786038786 1.040173179542981 0.8113897210006333 0.9775626107475007 0.9445480870583233 1.0 23.596220662913186 -7.301953089503031 24.24805640633111 0.9707915880139409 0.8865290666892714 0.1481420885108038 0.09751942497914065 853.8072582334855 511011.2300846886 0.056955755105220655 0.027361308111851095 4.989383775834092e-08 7.301953089503031 -0.08426252132466949 TNPS(ph)PTNPFSSDLQK ddPTM_KYSE-520_SHP099_60min_R1 3 TNPSPTNPFSSDLQK 15 0 G3V3Z8;P49757-3;P49757;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5;P49757-4;P49757-2 G3V3Z8 NUMB Protein numb homolog 1 TNPS(0.5)PT(0.5)NPFSSDLQK;TNPS(0.994)PT(0.006)NPFSSDLQK;TNPS(0.987)PT(0.013)NPFSSDLQK 279.19 6.086399999999999e-26 1105790000.0 1491050.0 1654730.0 1355590.0 1202460.0 1356570.0 1859920.0 1390560.0 1744860.0 2113030.0 1760470.0 True False 1408338.4841655158 1575234.2869996333 1442973.5004206898 1316741.436867219 1463324.3411725375 1848311.5493777047 1531131.3753577813 1738807.4879133843 1729357.0171515644 1744873.6054249345 0.8071292268889234 0.9027784488814086 0.8269788114934995 0.7546342799692639 0.8386420292122934 1.0592810525823615 0.8775027432344591 0.9965234630791078 0.9911073282184291 1.0 20.734691104079477 -6.167636032538912 7.374656576399112 0.9776951447515078 0.8253753783402402 0.6834366121472248 0.05398316368989607 0.1719943353011008 11.864040900309101 0.017900543430222838 0.01791203788365422 6.797730887104576e-07 6.167636032538912 -0.15231976641126754 TNQAILSQLYQS(ph)PNR ddPTM_KYSE-520_SHP099_60min_R1 1 TNQAILSQLYQSPNR 15 0 C9JB16;A0A0A0MRX1;Q12926-2;Q12926 C9JB16 ELAVL2 ELAV-like protein;ELAV-like protein 2 1 TNQAILS(0.051)QLY(0.017)QS(0.932)PNR 61.253 0.032798 492650000.0 156020.0 156730.0 95383.0 168670.0 137700.0 142920.0 134570.0 172030.0 180300.0 161760.0 True False 147365.25958184077 149200.45554347377 101531.54079819607 184700.34608751556 148536.206594174 142027.9832665177 148173.64887663713 171433.26808210404 147562.064993127 160326.9322473756 0.9191547391081138 0.9306013247560035 0.6332781359624502 1.152023203453635 0.9264582345091643 0.8858647843855476 0.9241968694817498 1.0692730515019895 0.9203822646930391 1.0 17.29065726896264 -5.268904177876348 24.998992147555064 0.9766828301425553 0.8379703907985289 0.3048890979616319 0.10659558304836364 771.6848407691857 2584307.741268781 0.029879281646768924 0.045327723912058804 5.3838855870684984e-06 5.268904177876348 -0.13871243934402644 TNRGS(ph)QLHK ddPTM_KYSE-520_SHP099_60min_R1 6 TNRGSQLHK 9 1 P42356;P42356-2 P42356 PI4KA Phosphatidylinositol 4-kinase alpha 1 T(0.001)NRGS(0.999)QLHK;T(0.001)NRGS(0.999)QLHK;TNRGS(1)QLHK;TNRGS(1)QLHK;T(0.001)NRGS(0.999)QLHK;T(0.001)NRGS(0.999)QLHK 125.82 0.00043107 5573460000.0 2190140.0 2014500.0 1634940.0 1770100.0 1756840.0 1709360.0 1631860.0 1641080.0 2048320.0 1648470.0 True False 2068648.568264151 1917720.396173854 1740330.848396493 1938329.7718000282 1895093.3129477738 1698691.2501851018 1796824.334218836 1635387.4765109508 1676396.721945213 1633865.8382902516 1.2661067511080806 1.1737318641661791 1.0651614150998168 1.1863457368252346 1.1598830629391714 1.0396760923544899 1.0997379907882223 1.0009313116077458 1.0260308298626695 1.0 20.639858093579015 -1.0000000000000007 0.17405790808472868 0.9676605138786498 2.0954668813589805 0.7009299539051876 0.04710009192597574 34.49949772841481 0.3792419740672139 0.1211692230960556 10.20008887628472 0.09999999999999985 1.0000000000000007 1.1278063674803307 TNRT(ph)SQDYDQLPSCSDGSQAPARPPKPR ddPTM_KYSE-520_SHP099_60min_R1 1 TNRTSQDYDQLPSCSDGSQAPARPPKPR 28 3 Q13191 Q13191 CBLB E3 ubiquitin-protein ligase CBL-B 1 T(0.016)NRT(0.492)S(0.492)QDYDQLPSCSDGSQAPARPPKPR 191.8 1.4607e-15 2658700000.0 927360.0 839060.0 865880.0 877740.0 800140.0 909410.0 989770.0 932630.0 1206600.0 876830.0 True False 875917.492153672 798750.2981452637 921696.0102569843 961160.1456978461 863106.4658261597 903734.0348614891 1089825.6108243219 929394.9242074789 987511.8559107439 869061.9683634177 1.007888417673097 0.9190947564411752 1.0605641988829462 1.1059742350799955 0.9931472061210167 1.0398959657196418 1.254025202456664 1.0694230768810167 1.1362962502782008 1.0 19.729099526347763 -5.106796702020365 0.7578887991745566 1.1065096727048171 0.9472121009920947 0.24164483737301035 0.07626368409745614 1.4650636866872118 1.326368918435836 0.03640860930439664 0.1648915631086107 7.819937787328843e-06 5.106796702020365 -0.1592975717127224 TNRTS(ph)PNNAR ddPTM_KYSE-520_SHP099_60min_R1 8 TNRTSPNNAR 10 1 Q9Y232-2;Q9Y232 Q9Y232-2 CDYL Chromodomain Y-like protein 1 TNRT(0.101)S(0.899)PNNAR;TNRT(0.09)S(0.91)PNNAR;T(0.004)NRT(0.102)S(0.893)PNNAR;T(0.004)NRT(0.02)S(0.976)PNNAR;T(0.016)NRT(0.048)S(0.936)PNNAR;T(0.01)NRT(0.06)S(0.93)PNNAR;T(0.021)NRT(0.152)S(0.826)PNNAR;T(0.027)NRT(0.103)S(0.869)PNNAR 105.25 0.0035825 2349130000.0 1071450.0 939871.0 874070.0 865064.0 879557.0 937373.0 864033.0 808530.0 1164095.0 1045945.0 True False 1012014.5326173775 894718.1863848685 930413.9507614467 947279.4224690241 948773.1319052426 931522.5074061396 951377.8877894589 805725.3981423206 952724.6924468904 1036678.7410328957 0.9762084361921572 0.8630621531733305 0.8974949653490801 0.9137637196314081 0.9152045801189399 0.898564300139903 0.9177171771088435 0.7772180196726475 0.919016330457054 1.0 19.983537452360988 TNS(ph)FNSHQPRPGPPGK ddPTM_KYSE-520_SHP099_60min_R1 4 TNSFNSHQPRPGPPGK 16 1 Q9NRM7 Q9NRM7 LATS2 Serine/threonine-protein kinase LATS2 1 T(0.007)NS(0.812)FNS(0.181)HQPRPGPPGK;T(0.05)NS(0.899)FNS(0.05)HQPRPGPPGK;TNS(0.94)FNS(0.06)HQPRPGPPGK;TNS(0.973)FNS(0.026)HQPRPGPPGK 157.85 5.0012e-07 3726980000.0 865425.0 910202.0 825004.0 870324.0 779323.0 750348.0 654160.0 796936.0 1021904.0 721800.0 True False 817418.1500680327 866474.5296789436 878185.0778930715 953039.3312875481 840651.2863586877 745664.7998045427 720288.8767863637 794171.6150222599 836351.9937034755 715405.4135519024 1.1425943032911217 1.211165743598446 1.2275348512293016 1.3321667871589364 1.175069786213882 1.042296837121215 1.0068261480021732 1.1101000914702235 1.1690601970022672 1.0 19.44840150984422 -6.097764734956462 4.609694709622834 1.0699447307154446 1.2298976382092541 0.5993638511130864 0.06313199867775164 0.1701833825160445 6.005941577832413 0.02224808523490191 0.022512756406685385 7.984270922903045e-07 6.097764734956462 0.15995290749380953 TNS(ph)MGS(ph)ATGPLPGTK ddPTM_KYSE-520_SHP099_60min_R1 2 TNSMGSATGPLPGTK 15 0 O15014 O15014 ZNF609 Zinc finger protein 609 2 T(0.002)NS(0.998)MGS(0.994)AT(0.006)GPLPGTK;T(0.034)NS(0.966)MGS(0.797)AT(0.203)GPLPGTK 190.37 1.6111e-09 0.0 1189920.0 1094250.0 1065830.0 1146600.0 1170390.0 1098400.0 1134400.0 1350510.0 1442430.0 1189020.0 True False 1123912.7655532872 1041680.5874972643 1134535.1071882965 1255572.5192621397 1262493.034391831 1091544.478169209 1249076.2226770972 1345825.3960214024 1180521.0727012535 1178486.2078435614 0.9536919126188717 0.883914109952437 0.9627054603076872 1.0654112970567842 1.0712836739107778 0.9262259251778249 1.059898889239191 1.141995033173994 1.001726676853873 1.0 20.168503443744132 -5.077932009356355 4.1878543577364 1.041185440803985 0.9189815337368767 0.4366150149302004 0.05572611363288358 0.20018173022910207 6.516331644032913 0.015780358903770216 0.029596708769375535 8.35733845669342e-06 5.077932009356355 -0.12220390706710815 TNS(ph)MGSATGPLPGTK ddPTM_KYSE-520_SHP099_60min_R1 9 TNSMGSATGPLPGTK 15 0 O15014 O15014 ZNF609 Zinc finger protein 609 1 TNS(0.997)MGS(0.003)ATGPLPGTK;TNS(1)MGSATGPLPGTK;T(0.001)NS(0.983)MGS(0.015)ATGPLPGTK;TNS(0.999)MGS(0.001)ATGPLPGTK;T(0.247)NS(0.751)MGS(0.002)ATGPLPGTK;TNS(0.999)MGS(0.001)ATGPLPGTK;T(0.03)NS(0.969)MGSATGPLPGTK;T(0.026)NS(0.974)MGSATGPLPGTK;TNS(1)MGSATGPLPGTK 337.95 2.6802999999999994e-54 18602860000.0 10563780.0 12333460.0 9151640.0 7827220.0 8360790.0 12405040.0 9471710.0 12461510.0 13985600.0 12615920.0 True False 9977786.06502665 11740942.068699116 9741569.357541712 8571116.635460507 9018736.606612217 12327615.54394405 10429202.88178147 12418283.9303483 11446167.588285511 12504152.763837224 0.7979577867828853 0.9389634220284512 0.7790667261931514 0.6854616060232966 0.7212593109622714 0.9858817128015478 0.8340591384922427 0.9931327747580578 0.9153892954178015 1.0 23.575903973244294 -6.2657085949801345 24.998218853694212 0.9382862944908211 0.7873121275262346 0.5253085814111709 0.07641044387926134 352.1230611913671 2061834.794780004 0.028390392518857846 0.02593092372756138 5.4236468682765e-07 6.2657085949801345 -0.15097416696458654 TNS(ph)MQQLEQWIK ddPTM_KYSE-520_SHP099_60min_R1 9 TNSMQQLEQWIK 12 0 Q9HAU0;Q9HAU0-2;Q9HAU0-4;Q9HAU0-6;B4DJX4;Q9HAU0-8;A0JP02;Q9HAU0-5;Q9HAU0-3 Q9HAU0 PLEKHA5 Pleckstrin homology domain-containing family A member 5 1 T(0.001)NS(0.999)MQQLEQWIK;T(0.001)NS(0.999)MQQLEQWIK;T(0.057)NS(0.943)MQQLEQWIK;TNS(1)MQQLEQWIK;T(0.011)NS(0.989)MQQLEQWIK;TNS(1)MQQLEQWIK;T(0.006)NS(0.994)MQQLEQWIK;T(0.032)NS(0.968)MQQLEQWIK;T(0.059)NS(0.941)MQQLEQWIK 328.37 3.3089e-40 5027260000.0 4585100.0 4189070.0 3392700.0 2905660.0 3233060.0 3759440.0 3093250.0 3819310.0 4633160.0 3835050.0 True False 4330755.362829755 3987820.7892777375 3611398.8705119267 3181813.0527814664 3487483.4284049342 3735975.940466543 3405945.8972108033 3806061.7050436595 3791894.93645899 3801074.4406237514 1.1393503154121558 1.049129884607927 0.950099485533701 0.8370825413930423 0.9174993762638973 0.9828736581789949 0.8960481964809645 1.001312067021526 0.9975850238378243 1.0 21.857975848685353 -4.5603213976485915 2.6979151483311945 0.9419475056829087 1.1344730379580483 0.5971326920248484 0.050591714393790926 0.20421522156755192 2.7487510496096714 0.014254774174988055 0.06477223704527814 2.7521912029749096e-05 4.5603213976485915 0.19252553227513958 TNS(ph)PGFQK ddPTM_KYSE-520_SHP099_60min_R1 9 TNSPGFQK 8 0 A0A087X0H9;Q5T8P6-3;Q5T8P6-2;Q5T8P6;Q5T8P6-5;Q5T8P6-4 A0A087X0H9 RBM26 RNA-binding protein 26 1 T(0.004)NS(0.996)PGFQK;T(0.007)NS(0.993)PGFQK;TNS(1)PGFQK;T(0.002)NS(0.998)PGFQK;TNS(1)PGFQK;TNS(1)PGFQK;TNS(1)PGFQK;T(0.001)NS(0.999)PGFQK;TNS(1)PGFQK 147.19 0.00047907 12002910000.0 24458610.0 22032230.0 20104630.0 18584830.0 20715110.0 21062060.0 21080830.0 23432130.0 28007450.0 22437360.0 True False 23101842.146269783 20973768.599748563 21400606.618345372 20351126.65546709 22345271.304146938 20930603.87096551 23211886.0254743 23350849.410130274 22922003.09035918 22238582.446401928 1.038818108211188 0.9431252486662879 0.9623188289956793 0.9151269737860375 1.0047974666551767 0.9411842648429221 1.043766439763783 1.0500151916791038 1.030731304281844 1.0 24.406561493517334 -6.769481749207299 24.997630535116738 1.0352961819611648 0.9655218713572638 0.44219720966770004 0.03480488637412139 155.31053283277225 482737.94732331106 0.013913059293650354 0.009566788364178578 1.700271404351978e-07 6.769481749207299 -0.06977431060390105 TNS(ph)SSSSPVVLK ddPTM_KYSE-520_SHP099_60min_R1 7 TNSSSSSPVVLK 12 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-2;Q7Z589-6;Q7Z589-4 Q7Z589 EMSY;C11orf30 Protein EMSY 1 T(0.107)NS(0.824)S(0.065)S(0.001)S(0.002)S(0.002)PVVLK;TNS(0.408)S(0.408)S(0.183)S(0.001)SPVVLK;TNS(0.452)S(0.182)S(0.182)S(0.182)S(0.002)PVVLK;TNS(0.509)S(0.2)S(0.2)S(0.079)S(0.012)PVVLK;T(0.009)NS(0.972)S(0.018)S(0.001)SSPVVLK;T(0.004)NS(0.972)S(0.023)S(0.001)SSPVVLK;T(0.003)NS(0.984)S(0.013)SSSPVVLK 260.47 1.6000999999999999e-21 10459800000.0 10756200.0 11561500.0 8312270.0 7639890.0 7933440.0 11512400.0 8565580.0 10431970.0 12351300.0 10863740.0 True False 10159532.144046906 11006068.185834689 8848092.224302236 8365982.848583322 8557756.592901105 11440546.841292053 9431472.418404892 10395783.930910103 10108615.27093517 10767495.715461837 0.943537142945698 1.0221567276809098 0.8217409561256301 0.7769664432343347 0.7947768746833486 1.0625076752864395 0.8759207031642046 0.9654783438624484 0.9388083857251476 1.0 23.36017941372275 -6.2515349492153724 24.997569138774367 0.9605965259451309 0.872133258910284 0.2625233908193061 0.08049394345118202 1201.3710903451174 3032116.3419329347 0.02916758351788756 0.02881816023798601 5.603573216110617e-07 6.2515349492153724 -0.08846326703484686 TNS(ph)TGGSSGSSVGGGSGK ddPTM_KYSE-520_SHP099_60min_R1 10 TNSTGGSSGSSVGGGSGK 18 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 TNS(0.998)T(0.002)GGSSGSSVGGGSGK;TNS(0.972)T(0.028)GGSSGSSVGGGSGK;T(0.004)NS(0.975)T(0.021)GGSSGSSVGGGSGK;TNS(0.542)T(0.458)GGSSGSSVGGGSGK;TNS(0.855)T(0.038)GGS(0.05)S(0.05)GS(0.005)S(0.001)VGGGSGK;TNS(0.994)T(0.006)GGSSGSSVGGGSGK;TNS(0.498)T(0.498)GGS(0.004)S(0.001)GSSVGGGSGK;TNS(0.696)T(0.301)GGS(0.001)S(0.001)GSSVGGGSGK;TNS(0.894)T(0.106)GGSSGSSVGGGSGK;TNS(0.755)T(0.245)GGSSGSSVGGGSGK 368.19 2.1110999999999996e-72 18800017000.0 14662432.0 16400790.0 10751307.0 10683682.0 9815812.0 15229080.0 12700893.0 15529370.0 15893640.0 16260160.0 True False 13849077.668126449 15612871.430312328 11444353.451919414 11699055.92511389 10588260.560069509 15134029.662779618 13984823.213210495 15475502.2400522 13007755.622059694 16116107.632613061 0.8593314207024171 0.9687743334946232 0.710118951350279 0.7259231690311694 0.6569986253158779 0.9390623348874837 0.867754394051723 0.960250613413346 0.8071276215440999 1.0 23.94200000998806 -6.301805607853037 24.99938887277321 0.9094118908863276 0.7871252346649023 0.32375079746613056 0.09417329488575567 736.7224604404205 456260.80883086205 0.03530894313010179 0.031139913894545214 4.991078403646694e-07 6.301805607853037 -0.12228665622142532 TNS(ph)VLALR ddPTM_KYSE-520_SHP099_60min_R1 1 TNSVLALR 8 0 F8WDB7 F8WDB7 ARHGEF3 1 T(0.156)NS(0.844)VLALR 86.794 0.013259 121710000.0 203570.0 217950.0 204620.0 205070.0 211470.0 206450.0 161100.0 181380.0 212740.0 176720.0 True False 192277.56629326573 207479.3548503805 217810.13260357548 224559.79114345607 228111.48590029005 205161.46897126088 177385.5601844857 180750.8351144102 174111.77873897846 175154.39828607952 1.097760422659892 1.184551212419483 1.2435321906551635 1.2820676691011936 1.3023451773544148 1.1713178257514882 1.0127382579041035 1.0319514490249342 0.9940474258294208 1.0 17.4182676904149 -6.685546117878656 3.7980136443098282 1.0106515214720486 1.225469256320094 0.7801304494475488 0.05349293077707492 0.11431414634071066 3.2261139292068024 0.024199054442689404 0.01782520384254287 2.0627846078812378e-07 6.685546117878656 0.21481773484804534 TNSMSSSGLGS(ph)PNR ddPTM_KYSE-520_SHP099_60min_R1 14 TNSMSSSGLGSPNR 14 0 F8VUB4;F8VV52;F8VP97;Q9NZN8-4;Q9NZN8;F8VQD8;A0A087X050;F8VVY1;F8VX63;Q9NZN8-5 F8VUB4 CNOT2 CCR4-NOT transcription complex subunit 2 1 TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSSSGLGS(1)PNR;TNSMSS(0.001)S(0.001)GLGS(0.998)PNR 339.4 5.173099999999999e-54 33020290000.0 12713400.0 12379420.0 10708250.0 9948420.0 10447400.0 11066740.0 10266500.0 11337050.0 13472600.0 10874200.0 True False 12008162.358465413 11784694.081311762 11398520.928805789 10893914.845698453 11269550.942425363 10997668.370661233 11304338.011384383 11297724.41963735 11026315.456607893 10777863.04799957 1.1141505792926356 1.093416573288066 1.0575863580787859 1.0107676073802425 1.0456201653552326 1.0203941469364337 1.0488478060112787 1.0482341786421445 1.02305210295416 1.0 23.361567824151003 -4.803249635690341 2.3833003982906935 1.031362113495466 1.110571882308535 0.782385498037611 0.015874076274904465 0.1300010516151908 1.4506607087291987 0.00422316731637109 0.013378503339909684 1.573078387412901e-05 4.803249635690341 0.07920976881306907 TNSMSSSGLGS(ph)PNRS(ph)SPSIICMPK ddPTM_KYSE-520_SHP099_60min_R1 1 TNSMSSSGLGSPNRSSPSIICMPK 24 1 F8VUB4;F8VV52;F8VP97;Q9NZN8-4;Q9NZN8;F8VQD8;A0A087X050;F8VVY1;F8VX63;Q9NZN8-5 F8VUB4 CNOT2 CCR4-NOT transcription complex subunit 2 2 T(0.193)NS(0.194)MS(0.142)S(0.123)S(0.122)GLGS(0.256)PNRS(0.52)S(0.406)PS(0.044)IICMPK 62.833 0.015056 0.0 1043300.0 938420.0 755940.0 954210.0 811610.0 812080.0 795110.0 737230.0 895220.0 684140.0 True False 985426.0692330129 893336.8946028638 804669.1019467647 1044897.8315063015 875479.0895707876 807011.5074942184 875487.4783258007 734672.721200775 732670.6146597174 678079.0518528668 1.453261336624857 1.3174524300106307 1.1866892211873936 1.5409675739887465 1.29111655518412 1.1901436938496193 1.2911289265366785 1.0834617574356038 1.0805091421976212 1.0 19.371093949963456 -7.178308710247765 0.7675229430961286 0.9987528152720692 1.360175994683022 0.6366859171296053 0.09719820183797954 0.4339245707351998 0.4788236286240226 0.0892852781640998 0.04276553692390323 6.632714284923727e-08 7.178308710247765 0.3614231794109529 TNSS(ph)SSSPVVLK ddPTM_KYSE-520_SHP099_60min_R1 1 TNSSSSSPVVLK 12 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-2;Q7Z589-6;Q7Z589-4 Q7Z589 EMSY;C11orf30 Protein EMSY 1 TNS(0.003)S(0.479)S(0.479)S(0.038)S(0.001)PVVLK 259.72 1.6570999999999997e-21 829210000.0 1107800.0 1063800.0 859490.0 710870.0 801390.0 1051200.0 863880.0 1111400.0 1228400.0 1173400.0 True False 1046348.1256554502 1012693.451203647 914894.1006326234 778430.871069142 864454.8337146327 1044639.0708771592 951209.4210563219 1107544.8128027113 1005353.525444023 1163004.588891385 0.8996938925691295 0.870756195527122 0.7866642224556751 0.6693274287173436 0.7432944306252997 0.8982243757721923 0.8178896542128409 0.9523133643509182 0.8644450202921037 1.0 20.149425358618352 -7.4135835268877575 0.8901522669059515 0.9743184768323745 0.7982708323749448 0.3975065964592913 0.07259609764084794 0.6315873360058053 0.9292760094669371 0.07284012442787095 0.02914049819177539 3.858481951363923e-08 7.4135835268877575 -0.1760476444574297 TNSSS(ph)SSPVVLK ddPTM_KYSE-520_SHP099_60min_R1 1 TNSSSSSPVVLK 12 0 Q7Z589;Q7Z589-5;Q7Z589-7;E9PMC9;Q7Z589-2;Q7Z589-6;Q7Z589-4 Q7Z589 EMSY;C11orf30 Protein EMSY 1 TNS(0.005)S(0.02)S(0.73)S(0.239)S(0.006)PVVLK 245.93 1.6812000000000002e-15 2020700000.0 1197900.0 1207400.0 925440.0 772710.0 815620.0 1174200.0 921090.0 1131800.0 1340200.0 1150300.0 True False 1131450.0990455525 1149394.6916556505 985095.3431563529 846148.1260762668 879804.6537570079 1166871.3822526243 1014202.7661721157 1127874.0499641048 1096853.4636926716 1140109.2369198569 0.992404992790254 1.0081443553258804 0.8640359285376086 0.7421640827700321 0.77168452396185 1.0234733168245076 0.8895663093758518 0.9892684081844588 0.962059974758168 1.0 20.120740628812868 -6.2809410698593915 24.991680353267704 0.9669961674663727 0.8749803214548335 0.2488533250347399 0.08411058332349133 1483.1531569376841 1900674.6278186608 0.033513985030495685 0.029598452141104604 5.236714896204348e-07 6.2809410698593915 -0.09201584601153923 TNST(ph)GGSSGSSVGGGSGK ddPTM_KYSE-520_SHP099_60min_R1 3 TNSTGGSSGSSVGGGSGK 18 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 TNS(0.187)T(0.813)GGSSGSSVGGGSGK;TNS(0.246)T(0.753)GGSSGSSVGGGSGK;TNS(0.356)T(0.643)GGSS(0.001)GSSVGGGSGK 384.91 7.201499999999998e-86 13817870000.0 6062060.0 6632080.0 4471730.0 4216200.0 3754000.0 6237430.0 5239030.0 6150920.0 6360170.0 6370750.0 True False 5725785.447382995 6313464.921844968 4759984.870820974 4616906.380353248 4049418.4426617897 6198499.88571282 5768642.280405502 6129583.8941555135 5205323.4548382545 6314310.111368498 0.9067950965971875 0.9998661469727297 0.7538408451385585 0.7311814432491703 0.6413081352103818 0.981659084901901 0.9135823516205583 0.9707448297668502 0.8243693076566534 1.0 22.59019368603255 -6.339329816656977 24.999999999990813 0.9347122161529173 0.8102027599195639 0.2936819636567506 0.1018017144630579 178.4976965626163 57289.834141040046 0.03913792963722277 0.03451641178398021 4.577940916809004e-07 6.339329816656977 -0.12450945623335341 TNT(ph)MNGSKSPVISR ddPTM_KYSE-520_SHP099_60min_R1 1 TNTMNGSKSPVISR 14 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 T(0.111)NT(0.391)MNGS(0.306)KS(0.192)PVISR 55.864 0.046891 413280000.0 642780.0 550750.0 613470.0 482070.0 447940.0 445120.0 397310.0 429040.0 696640.0 486890.0 True False 607123.7120498376 524291.1433073961 653015.2577867052 527885.7878603693 483190.3295700374 442341.84097111993 437473.97217193065 427551.7603786893 570147.7368652911 482576.5333946882 1.2580879301755958 1.0864414388724337 1.3531848579396608 1.0938902978703768 1.0012719146764792 0.9166252611983906 0.9065380139695496 0.8859771057889476 1.1814659383757902 1.0 18.880398236699456 -5.597262827112635 3.210056402928459 0.9684863265321112 1.2195488857841499 0.55453998007347 0.09956556660551506 0.17927032378642188 3.7227371929552606 0.030061962651966336 0.040993983649784405 2.5277677744311486e-06 5.597262827112635 0.2510625592520387 TNT(ph)PQGVLPSSQLK ddPTM_KYSE-520_SHP099_60min_R1 1 TNTPQGVLPSSQLK 14 0 A0A2R8Y4Z0;Q14004-2;Q14004;A0A2R8Y7W5;A0A2R8YF61 A0A2R8Y4Z0 CDK13 Cyclin-dependent kinase 13 1 T(0.014)NT(0.986)PQGVLPSSQLK 162.26 1.8453e-07 424780000.0 651830.0 785710.0 554990.0 596730.0 677900.0 731790.0 552700.0 844560.0 772200.0 777910.0 True False 615671.6905091092 747963.3122252462 590765.5434153967 653443.0397865837 731246.8732766189 727222.6271662816 608572.3098321866 841630.4184817858 631987.945577886 771018.3226048228 0.7985175870128641 0.970097973415616 0.7662146619545217 0.8475064996885929 0.948416985482473 0.9431975944610745 0.7893097893914822 1.091582902515735 0.8196795420409284 1.0 19.5564056194241 -6.367986415418384 0.11865249927672925 1.0725201901981964 0.725558149085925 0.1654484970877782 0.093796602526383 27.374279341395127 1.5088712409696468 1.5140696075018372 2.623038083452098 4.285619254570127e-07 6.367986415418384 -0.34696204111227147 TNT(ph)PVKEDWNVR ddPTM_KYSE-520_SHP099_60min_R1 3 TNTPVKEDWNVR 12 1 A0A494C1K3;P78347-2;P78347-4;P78347-3;P78347;A0A494C0Q7 A0A494C1K3 GTF2I General transcription factor II-I 1 T(0.03)NT(0.97)PVKEDWNVR;T(0.001)NT(0.999)PVKEDWNVR;T(0.009)NT(0.991)PVKEDWNVR 151.22 5.4238999999999993e-05 4014700000.0 1674030.0 1696390.0 1323270.0 1121450.0 1359220.0 1422370.0 1240330.0 1244840.0 1575050.0 1379000.0 True False 1581168.2188039278 1614892.8780666979 1408570.1015068586 1228032.2708237623 1466182.8810961004 1413492.461228638 1365714.6608542698 1240521.9405878412 1289060.6237793944 1366783.1328457661 1.1568537691212157 1.1815282463314754 1.0305732253031892 0.8984836301475919 1.0727253255191809 1.0341746450189349 0.9992182578451405 0.9076216341688109 0.9431347174262047 1.0 20.38235291834833 -4.856251905229882 4.220247013490182 0.9814110793880056 1.1697368785877962 0.6794619534584032 0.05126465337284498 0.12308188934811976 3.9446704476518053 0.01453623336195777 0.03334090634827168 1.392348960019452e-05 4.856251905229882 0.18832579919979053 TNTMNGS(ph)KSPVISR ddPTM_KYSE-520_SHP099_60min_R1 1 TNTMNGSKSPVISR 14 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 TNTMNGS(0.629)KS(0.371)PVISR 136.26 0.00033742 322500000.0 1116800.0 1086200.0 944790.0 823720.0 922070.0 915290.0 898350.0 936260.0 1163000.0 905170.0 True False 1054848.8777143944 1034017.3215805613 1005692.6751174474 902006.1011395515 994631.6631393592 909577.3356004123 989163.9850511018 933012.3325847273 951828.5168441859 897150.8980116047 1.1757764274129388 1.1525567481148375 1.1209849729253 1.0054118021156837 1.1086559299486913 1.0138510005578203 1.1025614389323244 1.039972578361794 1.0609458441760082 1.0 19.774991136843084 -5.024796168001844 3.8198122336750733 1.0524712500356859 1.1614225755671927 0.6413532498247603 0.035789616339205105 0.1309548113609696 4.164111090379519 0.009090502289917637 0.0183660000932425 9.445040663042981e-06 5.024796168001844 0.10895132553150688 TNTMNGSKS(ph)PVISR ddPTM_KYSE-520_SHP099_60min_R1 7 TNTMNGSKSPVISR 14 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 T(0.001)NT(0.002)MNGS(0.156)KS(0.84)PVISR;TNTMNGS(0.083)KS(0.917)PVISR;TNTMNGS(0.006)KS(0.994)PVISR;TNTMNGS(0.097)KS(0.903)PVISR;T(0.001)NT(0.001)MNGS(0.048)KS(0.951)PVISR;TNTMNGS(0.014)KS(0.986)PVISR;TNTMNGS(0.005)KS(0.995)PVISR 308.42 3.5016000000000004e-42 10812450000.0 9325730.0 8514260.0 8186610.0 6288440.0 6591850.0 7282930.0 6897610.0 6762320.0 9526370.0 6862850.0 True False 8808413.166518142 8105222.169435185 8714331.979639122 6886091.446911566 7110591.09250403 7237474.532404294 7594887.732986413 6738863.090257351 7796621.34824502 6802050.488216511 1.2949643907785366 1.191585123261907 1.2811330928424216 1.0123552388857806 1.0453599403329947 1.0640136448475481 1.1165585651184695 0.9907105367611396 1.146216330171534 1.0 22.697538283812925 -5.259299720460788 24.99980282419743 1.0559285584980465 1.24946330310435 0.7558377191834346 0.052638568146883426 88.93604870518352 1039121.1509612226 0.013604960638288076 0.02219002234456522 5.504276976023083e-06 5.259299720460788 0.1935347446063036 TNTMNGSKS(ph)PVISRPK ddPTM_KYSE-520_SHP099_60min_R1 3 TNTMNGSKSPVISRPK 16 2 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2 A0A0U1RRM6 ENAH Protein enabled homolog 1 T(0.002)NT(0.005)MNGS(0.056)KS(0.937)PVIS(0.001)RPK;TNTMNGS(0.006)KS(0.985)PVIS(0.009)RPK;TNTMNGS(0.011)KS(0.988)PVISRPK 155.86 1.9419999999999998e-06 13776480000.0 8938100.0 7507900.0 7105200.0 7044100.0 7731400.0 7070200.0 6577500.0 7052400.0 9951500.0 7494200.0 True False 8442285.775339399 7147209.214412339 7563212.56072195 7713569.146114103 8339817.1943514515 7026072.259242473 7242417.890213861 7027936.87044253 8144558.456900181 7427807.218399367 1.1365784715611726 0.962223305514451 1.0182295175872593 1.038471909584147 1.1227832049400732 0.9459147299674446 0.9750411766575902 0.9461657611459919 1.096495670583016 1.0 22.824504941319585 -6.283336938367164 24.976239264895508 0.988253689744206 1.047432456738958 0.20188921336539245 0.06116478534061275 1422.617455764099 1622624.8277097768 0.02136620416946404 0.018862343489235628 5.207905098131411e-07 6.283336938367164 0.059178766994751886 TNTMNGSKSPVIS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 TNTMNGSKSPVISR 14 1 A0A0U1RRM6;Q8N8S7-3;Q8N8S7-2;Q8N8S7 A0A0U1RRM6;Q8N8S7 ENAH Protein enabled homolog 1 TNTMNGSKS(0.059)PVIS(0.941)R 207.21 4.5117e-12 3025200000.0 2411800.0 2129600.0 1942600.0 1742200.0 1799000.0 2006200.0 1772500.0 1859000.0 2381300.0 1848900.0 True False 2278012.6461958983 2027290.8194052307 2067823.1042698978 1907778.1641884686 1940571.0650901874 1993678.5616378945 1951681.5979329676 1852551.5628938596 1948915.9476879295 1832520.1844224324 1.2431037134326979 1.1062856696687275 1.128403998956021 1.0410680222819786 1.0589629961984894 1.0879435755116964 1.0650259759884129 1.0109310547527424 1.0635167701043262 1.0 20.805397658436753 -1.000000000000319 0.5548049972484228 1.043001853713511 9.917952862370749 0.8081340932816529 0.02883048156561101 57.1809297786775 0.516662092277994 0.013778431398472889 605.753898865879 0.09999999999992652 1.000000000000319 8.874951008657238 TNTNVNCPIECFMPLDVQADREDS(ph)RE ddPTM_KYSE-520_SHP099_60min_R1 7 TNTNVNCPIECFMPLDVQADREDSRE 26 2 H0Y7Z1;P02751-12;P02751-10;P02751-6;P02751-5;P02751-9;P02751-14;P02751-13;P02751-8;P02751-17;P02751-3;P02751-11;P02751-1;P02751-7;P02751 H0Y7Z1 FN1 Fibronectin;Anastellin;Ugl-Y1;Ugl-Y2;Ugl-Y3 1 TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE;TNTNVNCPIECFMPLDVQADREDS(1)RE 275.21 1.0959999999999999e-38 1540025000.0 451142.0 494543.0 488167.0 592513.0 541069.0 398933.0 421412.0 536316.0 668223.0 413320.0 True False 426116.2539307196 470784.41195582284 519635.0259148163 648825.2573744704 583648.0520385116 396443.111170317 464012.43754478276 534455.6449730953 546890.5477310166 409658.30635809386 1.040174817200556 1.1492124159305999 1.2684596353835156 1.5838205824327016 1.4247191939721793 0.967740931936029 1.132681628428099 1.3046376374605049 1.334991965848153 1.0 18.644061542087087 -6.239910746746985 24.947909051337124 1.1660921878227553 1.3000362355415784 0.14376004500666484 0.17410352538394558 1964.5296835935824 2276545.7166738403 0.063492691024108 0.0634340865604862 5.755582099986607e-07 6.239910746746985 0.13394404771882318 TNYNDRYDEIR ddPTM_KYSE-520_SHP099_60min_R1 6 TNYNDRYDEIR 11 1 P62424;Q5T8U2 P62424 RPL7A 60S ribosomal protein L7a 0 ;;;;; 208.08 1.6859000000000001e-09 7436210000.0 9596000.0 7781950.0 5743210.0 5469360.0 9060500.0 8137160.0 7125750.0 6811640.0 6705260.0 6838220.0 False True 9063690.750848245 7408093.441054903 6113426.506060906 5989166.329976949 9773509.802806908 8086372.966113761 7846090.3506182395 6788012.010688732 5487753.809849221 6777638.690854655 1.337293291110111 1.09301982282575 0.9019994698610893 0.8836656250293153 1.4420228413761131 1.1930959047765464 1.1576436438261737 1.001530521219444 0.8096852104633538 1.0 22.692351299565104 -7.4588527177602195 3.9738047433611117 0.902836087887283 1.1352349764589444 0.2552347719714363 0.16646424881772304 0.3431088862134745 10.57469189454987 0.11415665450982423 0.047500458053375355 3.476540413304979e-08 7.4588527177602195 0.23239888857166147 TNYNDRYDEIRR ddPTM_KYSE-520_SHP099_60min_R1 9 TNYNDRYDEIRR 12 2 P62424;Q5T8U2 P62424 RPL7A 60S ribosomal protein L7a 0 ;;;;;;;; 179.5 4.688e-07 39907810000.0 20724870.0 19776510.0 15559290.0 11047060.0 18251200.0 15876490.0 11843240.0 11666670.0 17051550.0 11316170.0 False True 19575220.14709594 18826416.774453286 16562266.729144203 12096969.260980291 19687465.604877163 15777398.936825072 13040470.27808386 11626201.04479124 13955418.354595436 11215917.537647048 1.745307067512781 1.678544507059814 1.4766751515024734 1.078553691249595 1.7553147603657697 1.4066971234290087 1.1626752991284546 1.0365804675156576 1.2442511553560422 1.0 23.419044311641237 -1.0000000000000002 0.15319954546012124 0.9005740126040034 4.099467324260355 0.570766287424704 0.1838796464495695 51.578896425322846 0.5164374709574925 0.6519696429195464 36.853838799521505 0.09999999999999995 1.0000000000000002 3.198893311656352 TPAAAAAMNLAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 TPAAAAAMNLASPR 14 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 TPAAAAAMNLAS(1)PR 155.2 1.142e-06 4101200000.0 1608700.0 1424300.0 1278900.0 1058300.0 1167100.0 1507700.0 1122700.0 1462100.0 1545400.0 1639500.0 True False 1519462.2041360538 1355874.4900821156 1361339.940312348 1158880.5138105028 1258944.130109369 1498289.8850470826 1236193.4724961014 1457028.316356706 1264794.316363718 1624975.3055116995 0.9350678739438321 0.8343969815929941 0.837760386693179 0.713168077003838 0.7747466228189428 0.922038556503033 0.7607460053719574 0.8966464360502343 0.7783467921473664 1.0 20.631986363227412 -10.485426470839268 4.0021008995209195 1.0015140012959218 0.8264193018342886 0.35538428270332567 0.06942011364515283 0.0009357421839307637 0.00012031362866709193 0.06706963478307988 0.016129276251132727 3.2701940887149355e-11 10.485426470839268 -0.17509469946163325 TPAAPAS(ph)PAAVPSEGSGGSTTGWR ddPTM_KYSE-520_SHP099_60min_R1 5 TPAAPASPAAVPSEGSGGSTTGWR 24 0 P07199 P07199 CENPB Major centromere autoantigen B 1 TPAAPAS(1)PAAVPSEGSGGSTTGWR;TPAAPAS(1)PAAVPSEGSGGSTTGWR;TPAAPAS(1)PAAVPSEGSGGSTTGWR;TPAAPAS(1)PAAVPSEGSGGSTTGWR;TPAAPAS(1)PAAVPSEGSGGSTTGWR 347.74 6.3501e-73 4304670000.0 1018578.0 1243608.0 895149.0 688284.0 717658.0 1206599.0 811120.0 1101694.0 1160279.0 1140013.0 True False 962075.4478550983 1183863.2049863366 952851.7368290395 753698.3044198699 774133.6016845427 1199068.1680758267 893115.9253683428 1097872.480651314 949601.5818533589 1129913.371736694 0.8514594763812502 1.0477468756447417 0.8432962744431389 0.6670407867298926 0.6851265070831826 1.0612036268168425 0.7904286715322345 0.9716430552227799 0.8404198105858389 1.0 20.107780737578206 -8.282068445582842 0.6204344975256095 0.9982848620764857 0.8487171111908791 0.10056859681604502 0.126770725551382 3.156830322270892 2.5136194377693157 0.14976707020593402 0.05720803810182382 5.223138649179108e-09 8.282068445582842 -0.1495677508856066 TPADTGFAFPDWAYKPES(ph)SPGSR ddPTM_KYSE-520_SHP099_60min_R1 2 TPADTGFAFPDWAYKPESSPGSR 23 1 P50548 P50548 ERF ETS domain-containing transcription factor ERF 1 TPADTGFAFPDWAYKPES(0.5)S(0.5)PGS(0.001)R;TPADTGFAFPDWAYKPES(0.499)S(0.499)PGS(0.003)R 206.47 2.2549e-16 3487000000.0 468077.0 555558.0 609950.0 661525.0 832200.0 1009020.0 1053240.0 1134010.0 1365530.0 1092540.0 True False 442111.8357216334 528868.1597704416 649268.3529545063 724396.1371052559 897689.4054297121 1002722.3319030358 1159711.777831828 1130076.3839899246 1117584.174210009 1082860.945583257 0.4082812641132796 0.4883989601135532 0.5995860831464317 0.668965059696633 0.8289978589505723 0.9259936245673203 1.070970176329683 1.0436024944839397 1.0320661935111615 1.0 20.04641656204174 -5.637250496982851 0.7872348753480374 1.0554487238202686 0.406997147931106 0.9793670479754287 0.03371038398578688 0.0941903061478536 0.12231291591633532 0.01867859174699778 0.03778851012897423 2.305417062221361e-06 5.637250496982851 -0.6484515758891626 down TPADTGFAFPDWAYKPESS(ph)PGSR ddPTM_KYSE-520_SHP099_60min_R1 1 TPADTGFAFPDWAYKPESSPGSR 23 1 P50548 P50548 ERF ETS domain-containing transcription factor ERF 1 TPADTGFAFPDWAYKPES(0.178)S(0.804)PGS(0.018)R 140.57 6.2514e-07 3951900000.0 342960.0 447510.0 429210.0 475900.0 562350.0 716170.0 793420.0 775930.0 897030.0 758110.0 True False 323935.3251261896 426010.94787379564 456877.56336028135 521129.39291544707 606603.7456661853 711700.1173802271 873626.6366329888 773238.479933423 734151.9642861042 751393.7352006558 0.4311126243815227 0.5669610058167861 0.6080401551901076 0.6935503564935662 0.8073047687896878 0.9471733447314028 1.1626749009288604 1.0290723008582627 0.9770536136956914 1.0 19.519209561892907 -5.773739683579147 0.9924986604170104 1.051814445809869 0.49780251885363536 0.9250382776814347 0.0618709984141223 0.14131573865904712 0.2988415438414032 0.03064681300120154 0.047140020158248364 1.683682959434561e-06 5.773739683579147 -0.5540119269562337 down TPAEGRDS(ph)PTREPGALPCACGQLPDLEDELSLLDPLPR ddPTM_KYSE-520_SHP099_60min_R1 2 TPAEGRDSPTREPGALPCACGQLPDLEDELSLLDPLPR 38 2 Q96RY5 Q96RY5 CRAMP1L Protein cramped-like 1 T(0.001)PAEGRDS(0.72)PT(0.279)REPGALPCACGQLPDLEDELSLLDPLPR;T(0.011)PAEGRDS(0.983)PT(0.007)REPGALPCACGQLPDLEDELSLLDPLPR 270.01 5.4147e-42 264120000.0 45645.0 53519.0 49999.0 42437.0 34573.0 52652.0 39353.0 45047.0 62376.0 51135.0 True False 43112.980858948395 50947.86690634323 53222.01554122852 46470.19972085071 37293.69840653864 52323.379337732295 43331.18528826853 44890.742471048856 51050.09077099993 50681.983682428014 0.850656934209466 1.0052461092600722 1.0501170568759952 0.9168978075529121 0.7358373863229186 1.0323861762315623 0.8549622990248488 0.8857337303988154 1.0072630757880052 1.0 15.629185371920729 -3.736227483876327 0.00319929176192485 1.843699327143872 1.9827482033630173e-07 0.018645358540110957 0.09555684401989663 907715.0219419089 391.2776617466712 109718.929935632 115832.19843389837 0.00018355766146588572 3.736227483876327 -1.8436991288690516 TPAQYDASELK ddPTM_KYSE-520_SHP099_60min_R1 1 TPAQYDASELK 11 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YNP5;H0YKS4;H0YMM1;H0YKX9;H0YMT9;H0YLV6;H0YKZ7;H0YMW4 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 131.83 0.00048105 0.0 223580.0 252050.0 215640.0 185550.0 266270.0 297760.0 217350.0 275820.0 269680.0 278160.0 False True 211177.57170431968 239941.13966523702 229540.499436199 203184.61621235844 287223.93413094146 295901.5693915359 239321.85913158275 274863.2447968722 220712.91007957028 275695.7188052052 0.7659805985363477 0.8703114459124741 0.8325863761358677 0.7369886521738845 1.0418149958065965 1.0732904039057904 0.8680651994479368 0.996980460879332 0.800567056449348 1.0 18.072717338787253 -5.760058895235157 24.99999278827396 0.9640245213136848 0.8086070731164878 0.4813758366742814 0.08223500222455522 34.730340056922024 628941.6080624473 0.02509899776144688 0.03066264160733407 1.7375651793150434e-06 5.760058895235157 -0.15541744819719694 TPARPFGS(ph)VGR ddPTM_KYSE-520_SHP099_60min_R1 2 TPARPFGSVGR 11 1 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 T(0.205)PARPFGS(0.795)VGR;TPARPFGS(1)VGR 81.185 0.013934 6220210000.0 3454750.0 2962800.0 2963620.0 2859090.0 2959990.0 3020520.0 2849640.0 3281180.0 3243500.0 3230300.0 True False 3263108.130626615 2820462.6407465315 3154659.6871596538 3130817.0539832492 3192924.3729606983 3001667.8142749993 3137709.4210063154 3269798.3524131696 2654562.1619811845 3201682.055135371 1.0191855638484524 0.880931520424591 0.9853132299941229 0.9778663215360635 0.9972646621295123 0.9375283874488546 0.9800190546633304 1.0212751597768874 0.8291148578364838 1.0 21.610398616636704 -3.8816383516539776 19.835021278255752 0.9596271422126893 14.283325985606522 0.09723267720974893 0.05654212033823205 1329.2741888813373 223890.75196132658 0.012844605526798804 4087.378402714967 0.00013132930571985106 3.8816383516539776 13.323698843393833 TPAS(ph)PHFR ddPTM_KYSE-520_SHP099_60min_R1 3 TPASPHFR 8 0 P29590-2 P29590-2 PML Protein PML 1 T(0.043)PAS(0.957)PHFR;T(0.153)PAS(0.847)PHFR;T(0.415)PAS(0.585)PHFR 97.47200000000001 0.0031512 3931540000.0 3409850.0 3448510.0 3044800.0 2804150.0 2866870.0 3209860.0 2942460.0 3045170.0 3499440.0 3207440.0 True False 3220698.823132549 3282838.4032809567 3241072.679852247 3070655.572901558 3092476.3587410236 3189826.0731028877 3239912.572442219 3034607.0160180195 2864029.909703542 3179024.576950559 1.0131091299149269 1.0326558740951854 1.0195179689240423 0.9659112405626784 0.9727752283398339 1.0033977391148985 1.0191530433369804 0.9545717381426884 0.9009146800780095 1.0 21.6001527392784 -5.233369661048965 0.4580037837307334 0.9621590042530666 1.043015371296259 0.2829028658324715 0.03212347374754682 3.0654097461877265 0.931358483141893 0.028229255105837476 0.12383334407886122 5.8429253662794865e-06 5.233369661048965 0.08085636704319255 TPASKS(ph)PSEGQTATTSPR ddPTM_KYSE-520_SHP099_60min_R1 2 TPASKSPSEGQTATTSPR 18 1 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 TPASKS(0.997)PS(0.003)EGQTATTSPR;TPAS(0.002)KS(0.994)PS(0.004)EGQTATTSPR 193.02 9.5442e-13 1306970000.0 364570.0 367120.0 294660.0 245620.0 271530.0 339550.0 217390.0 320920.0 437450.0 320880.0 True False 344346.57534772303 349483.0041416452 313654.25507266907 268963.65095165395 292897.8662056359 337430.7425003228 239365.9027219448 319806.80342329084 358020.1072171013 318037.2528408624 1.0827240276786856 1.0988744275077658 0.9862186026038074 0.8456985731990221 0.9209545850032682 1.0609786730523811 0.7526347954015227 1.0055639726686796 1.1257175189984594 1.0 18.278836237874135 -4.845460284619275 4.533354511408237 0.9507955594820171 1.0910899643854923 0.20923490962560032 0.09987940092695938 0.2931704527672133 10.777591416642933 0.026821387916229168 0.06076456584811032 1.4273803553376645e-05 4.845460284619275 0.14029440490347522 TPASTPVSGT(ph)PQAS(ph)PMIER ddPTM_KYSE-520_SHP099_60min_R1 8 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 2 TPAST(0.004)PVS(0.003)GT(0.993)PQAS(1)PMIER;TPASTPVSGT(1)PQAS(1)PMIER;TPASTPVS(0.003)GT(0.997)PQAS(1)PMIER;TPASTPVS(0.002)GT(0.998)PQAS(1)PMIER;TPASTPVS(0.001)GT(0.999)PQAS(1)PMIER;TPASTPVS(0.081)GT(0.918)PQAS(1)PMIER;TPASTPVS(0.001)GT(0.999)PQAS(1)PMIER;TPASTPVS(0.003)GT(0.997)PQAS(1)PMIER 326.2 1.4078999999999996e-62 12790470000.0 5634600.0 5385470.0 5049800.0 5384270.0 5587910.0 5486200.0 5180040.0 5515880.0 6356640.0 5656090.0 True False 5322037.505703377 5126743.937444724 5375318.187965671 5895989.401960192 6027646.726141243 5451958.590797441 5703688.995518585 5496746.699696073 5202434.413854189 5605981.442971435 0.9493498256894773 0.9145131837481266 0.9588540815997596 1.0517318799462596 1.0752170315687497 0.9725252654257174 1.0174291608955737 0.9805146084790708 0.9280149188465121 1.0 22.418535538065363 -5.028953777995549 8.644542659841958 1.0051501640713902 0.9330123009921184 0.3604139932555491 0.039353880559296985 0.32358387540146816 91.65825877511679 0.011387623387974869 0.020422636427481 9.355052347635398e-06 5.028953777995549 -0.07213786307927184 TPASTPVSGTPQAS(ph)PMIER ddPTM_KYSE-520_SHP099_60min_R1 10 TPASTPVSGTPQASPMIER 19 0 Q9UHR4 Q9UHR4 BAIAP2L1 Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 1 TPASTPVSGTPQAS(1)PMIER;TPASTPVSGT(0.005)PQAS(0.995)PMIER;TPASTPVSGTPQAS(1)PMIER;TPASTPVSGT(0.001)PQAS(0.999)PMIER;TPASTPVSGTPQAS(1)PMIER;TPASTPVSGTPQAS(1)PMIER;TPASTPVSGTPQAS(1)PMIER;TPASTPVSGTPQAS(1)PMIER;TPASTPVSGT(0.001)PQAS(0.999)PMIER;TPASTPVSGT(0.001)PQAS(0.999)PMIER 327.04 4.6394e-54 10018050000.0 3562670.0 4193790.0 2767590.0 2554620.0 2873730.0 4105750.0 2981740.0 4316090.0 4387020.0 4306150.0 True False 3365041.5930934274 3992314.033392869 2945993.279700569 2797410.3167254883 3099876.201712968 4080124.49129937 3283163.3781780787 4301118.491172978 3590447.7557745297 4268000.861134008 0.7884350782908081 0.9354060983793033 0.6902513320763057 0.6554380862946256 0.7263063674474824 0.9559802408791644 0.7692508706068402 1.0077595181248793 0.8412481329304483 1.0 22.02512903657218 -6.257444252653421 24.807981002995927 0.9062329184957693 0.7593670192156735 0.3928545652297726 0.09647162335600916 370.3250803028953 2299560.5644475003 0.03355411196047503 0.03236775810087913 5.527843604544487e-07 6.257444252653421 -0.14686589928009575 TPDFHDK ddPTM_KYSE-520_SHP099_60min_R1 2 TPDFHDK 7 0 A0A3B3IRN8;A0A3B3ITX0;P24311 A0A3B3IRN8 COX7B Cytochrome c oxidase subunit 7B, mitochondrial 0 ; 91.065 0.008294 0.0 763940.0 938390.0 592440.0 999870.0 1213930.0 1088220.0 875210.0 1202100.0 1319210.0 799680.0 False True 721562.7253233657 893308.3358478948 630629.6303375157 1094897.344178124 1309459.384683117 1081428.0153252871 963684.7680264652 1197930.1956722501 1079674.718577831 792595.4573416257 0.910379587265735 1.1270671911797996 0.7956513306960588 1.3814075440836142 1.6521156821603027 1.3644135924679774 1.2158595650531168 1.511401793406843 1.362201497090423 1.0 19.59622517314633 -5.2767081514116185 24.22529475628028 1.3835829421220462 0.9626361671613224 0.5193299147936854 0.17949822608827817 383.07290679040545 607779.3021549087 0.048998230774537924 0.07301379324675487 5.288004896131476e-06 5.2767081514116185 -0.42094677496072386 TPDGNKS(ph)PAPK ddPTM_KYSE-520_SHP099_60min_R1 1 TPDGNKSPAPK 11 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;E9PGZ1;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 1 TPDGNKS(1)PAPK 56.482 0.059370000000000006 0.0 383090.0 344210.0 317560.0 310680.0 317770.0 352620.0 341160.0 316320.0 381040.0 369100.0 True False 361839.2340290179 327673.63493025675 338030.42571396456 340206.9337906523 342776.69113602466 350419.16778225236 375647.7822007396 315222.75974964316 311852.7412367228 365830.0611554546 0.9890910355648962 0.8956990409572061 0.92400942843875 0.9299589342552304 0.936983390739905 0.9578741743515342 1.0268368351531207 0.8616644535827073 0.8524524754793322 1.0 18.480814104192596 -10.193116206225238 4.74230543412725 1.0000041531907535 0.9310804578803714 0.14509305351426716 0.05058784637983918 5.680252193444995e-06 9.664730516960452e-07 0.05062302848358682 0.01227605745900704 6.410380280630458e-11 10.193116206225238 -0.06892369531038212 TPDS(ph)APPS(ph)PAEAYPITPASVSARPPVAFPR ddPTM_KYSE-520_SHP099_60min_R1 1 TPDSAPPSPAEAYPITPASVSARPPVAFPR 30 1 A0A2R8YFR7;A0A2R8YF49;Q12774 A0A2R8YFR7;Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 2 T(0.002)PDS(0.998)APPS(1)PAEAYPITPASVSARPPVAFPR 103.41 1.3618e-06 0.0 165110.0 117700.0 117560.0 143800.0 150600.0 132100.0 150750.0 172520.0 167000.0 153180.0 True False 155951.01916137504 112045.51532869828 125138.1057026505 157466.70876495348 162451.36320321393 131275.51489999314 165989.28117821974 171921.5683864705 136677.00972741103 151822.94437223682 1.027190058829429 0.7380012012807963 0.8242371152797505 1.0371733298682404 1.070005353109992 0.8646618957549272 1.0933082734270398 1.1323819933629808 0.9002394881257786 1.0 17.212030310187902 -5.2631234271332215 24.91052518677267 1.0189028585814484 0.850628626800297 0.31155813228904217 0.10205044621100605 153.71121037772664 2273720.0398288085 0.027965470900653232 0.04404895999274449 5.456027779395241e-06 5.2631234271332215 -0.1682742317811513 TPDS(ph)PPTPAPLLLDLGIPVGQR ddPTM_KYSE-520_SHP099_60min_R1 5 TPDSPPTPAPLLLDLGIPVGQR 22 0 Q16584;Q16584-2;E9PID4 Q16584 MAP3K11 Mitogen-activated protein kinase kinase kinase 11 1 T(0.006)PDS(0.988)PPT(0.007)PAPLLLDLGIPVGQR;T(0.045)PDS(0.6)PPT(0.356)PAPLLLDLGIPVGQR;T(0.04)PDS(0.959)PPTPAPLLLDLGIPVGQR;T(0.102)PDS(0.894)PPT(0.004)PAPLLLDLGIPVGQR;T(0.051)PDS(0.949)PPTPAPLLLDLGIPVGQR 146.88 7.2347e-07 271041100.0 56067.799999999996 72399.0 55841.6 50566.8 52504.1 57648.6 46409.1 55094.7 66341.7 63281.3 True False 52957.60736561172 68920.84336688546 59441.23888571908 55372.65346853723 56635.873962535705 57288.79370373764 51100.58473716828 54903.58934489964 54295.71961816162 62720.67691410645 0.8443404945730277 1.0988536278278676 0.9477136059472312 0.8828452783500399 0.9029856938581251 0.913395653911587 0.8147326727220844 0.8753666581132087 0.8656749622220677 1.0 15.936653509400443 -5.134142475792804 4.441231814639381 0.8865416125126815 0.982199856223794 0.15773413917460744 0.07245380739580548 0.30979121819488264 9.740647512619015 0.018819006729219295 0.03408731918299121 7.34272941122631e-06 5.134142475792804 0.09565824371111253 TPDS(ph)TFSETFK ddPTM_KYSE-520_SHP099_60min_R1 1 TPDSTFSETFK 11 0 B7Z1S6;Q9NZI5-3;Q9NZI5 B7Z1S6 GRHL1 Grainyhead-like protein 1 homolog 1 T(0.278)PDS(0.641)T(0.075)FS(0.006)ETFK 107.09 0.00064537 178630000.0 251100.0 183030.0 137430.0 118250.0 160210.0 165540.0 147420.0 192260.0 221920.0 164500.0 True False 237170.9824445599 174236.96406636888 146288.95769577473 129488.44444684102 172817.6155297937 164506.80345605503 162322.65228055156 191593.0949338211 181624.92214794664 163042.65797906357 1.4546560107908397 1.068658756095247 0.8972434546213041 0.794199788275463 1.0599533746069407 1.0089801374385068 0.9955839428316701 1.1751102276462133 1.113971793634947 1.0 17.314889950569594 -4.277127764249852 3.8795207534395506 1.0048542251415888 1.4914050529731595 0.6406118164141552 0.10020334630897382 0.1585329093090347 4.801001880861432 0.028124611936089602 0.21364181688277567 5.282898123585939e-05 4.277127764249852 0.48655082783157066 TPDSEDKLFS(ph)PVIAR ddPTM_KYSE-520_SHP099_60min_R1 2 TPDSEDKLFSPVIAR 15 1 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7;X6R5W5 Q5VZ89-5 DENND4C DENN domain-containing protein 4C 1 TPDSEDKLFS(1)PVIAR;TPDSEDKLFS(1)PVIAR 146.97 4.8801999999999995e-06 1558920000.0 1431210.0 1353110.0 1247280.0 1289020.0 1301260.0 1949880.0 1924080.0 2263630.0 2640400.0 2222390.0 True False 1351817.9282536001 1288104.564540483 1327681.6645185621 1411528.073242006 1403661.7588433882 1937710.0756487383 2118584.783611206 2255777.9958652128 2160969.9190674042 2202701.353593254 0.6137091285881254 0.5847840255054121 0.6027515542916078 0.6408168183759402 0.6372456059708698 0.8796971375569198 0.9618120859440027 1.0240961591027196 0.9810544291636387 1.0 21.07084247430542 -6.379974371349861 1.8887583035356208 0.9996151686815611 0.604607336553943 0.9885790572849802 0.019317669424520675 0.03235335536616203 0.22809750223911412 0.008320052695323288 0.007005456411504206 4.1689398455386523e-07 6.379974371349861 -0.39500783212761803 TPDT(ph)PNNDPR ddPTM_KYSE-520_SHP099_60min_R1 1 TPDTPNNDPR 10 0 Q16513-3;Q16513-2;Q16513;B1AL79 Q16513-3 PKN2 Serine/threonine-protein kinase N2 1 T(0.001)PDT(0.999)PNNDPR 94.76700000000001 0.013918 130180000.0 214180.0 189360.0 182750.0 144360.0 158960.0 204060.0 173740.0 221900.0 279910.0 238670.0 True False 202299.00844275535 180262.86136484516 194530.35741033842 158079.9309965834 171469.2476413209 202786.3858477862 191303.3347389976 221130.28069184942 229085.39995688392 236555.5694824503 0.8551859881606534 0.7620317786608639 0.8223452858706434 0.6682570667959316 0.7248582141459238 0.8572462964683257 0.8087035750523308 0.9347921132258725 0.9684210794871158 1.0 17.851819602608824 -7.282329156332391 1.230660044014388 0.9987627048960364 0.7696093204244474 0.7193466190530784 0.053432669349449805 0.2620147123671324 0.6989741130382867 0.04757369047074816 0.01813722971256362 5.220004094626758e-08 7.282329156332391 -0.22915338447158895 TPDVLKK ddPTM_KYSE-520_SHP099_60min_R1 1 TPDVLKK 7 1 P31948;P31948-2;P31948-3 P31948 STIP1 Stress-induced-phosphoprotein 1 0 87.616 0.019651 951270000.0 1606500.0 1435100.0 1075500.0 965740.0 1454900.0 1287500.0 970510.0 1257200.0 1335000.0 1189800.0 False True 1517384.2425216476 1366155.641870984 1144828.4508608435 1057523.6392396824 1569392.3527513694 1279464.2349261234 1068618.6220648359 1252839.0666326869 1092597.6526113385 1179259.2976503924 1.286726545675705 1.158486216384278 0.9708029889116411 0.8967693885023748 1.3308288990201689 1.0849727769587094 0.9061778221244455 1.0623949025705357 0.9265117983706194 1.0 20.16944954489699 -4.517680634414439 3.6566077112903637 1.029600172156816 1.2722159393462515 0.33097221722920755 0.11985191389394945 0.27717597703764657 7.7484137067778365 0.032216733374921695 0.1287413169666585 3.036123026453577e-05 4.517680634414439 0.24261576718943556 TPEEIRK ddPTM_KYSE-520_SHP099_60min_R1 2 TPEEIRK 7 1 E5RJR5;P63208;E7ERH2;F8W8N3;P63208-2 E5RJR5 SKP1 S-phase kinase-associated protein 1 0 ; 82.671 0.028482999999999998 549040000.0 881720.0 867590.0 615930.0 488050.0 831880.0 798850.0 629470.0 724300.0 697880.0 698240.0 False True 832809.233934757 825909.67412086 655633.8333228437 534434.1252624168 897344.2232502635 793864.080831639 693102.9706351837 721787.5723528902 571162.5841231478 692054.1368224993 1.2033874080408236 1.1934177258342038 0.9473736207012994 0.7722432347796087 1.2966387678431257 1.1471126875660196 1.001515537234558 1.0429640312055775 0.825314890458695 1.0 19.400525373383232 -7.614116363891894 6.292470895578385 0.9139903626233155 1.074722269294603 0.1687705578284877 0.14614017804166696 0.4092814263330122 22.95701710721169 0.1073999699639705 0.0393707014526359 2.4315524170698108e-08 7.614116363891894 0.16073190667128756 TPEELDDS(ph)DFETEDFDVR ddPTM_KYSE-520_SHP099_60min_R1 20 TPEELDDSDFETEDFDVR 18 0 P35221;G3XAM7;P35221-2;P35221-3 P35221 CTNNA1 Catenin alpha-1 1 TPEELDDS(1)DFETEDFDVR;T(0.107)PEELDDS(0.893)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;T(0.002)PEELDDS(0.998)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(0.992)DFET(0.008)EDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(0.997)DFET(0.003)EDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR;TPEELDDS(1)DFETEDFDVR 363.97 2.893299999999999e-72 68593794000.0 15976025.0 15331497.0 14383292.0 14376971.0 15010365.0 14236808.0 13953552.0 15106995.0 20185634.0 15116711.0 True False 15089803.045833737 14594948.871073825 15310462.016400887 15743354.001246052 16191595.328205936 14147950.800396211 15364113.20970421 15054592.360344127 16520431.704023715 14982788.701163212 1.0071424850743718 0.974114309570469 1.0218699817352583 1.0507625993566734 1.0806796819439144 0.9442802059470954 1.0254508366998056 1.0047924095182188 1.1026272901213061 1.0 23.83680283746736 -4.88518299814165 6.383010153647761 1.0289318445718356 0.9910250663432288 0.11804750073441128 0.042114913013764514 0.44590943267986133 23.000289850458344 0.011082873427368856 0.023540613274045843 1.3026177803132391e-05 4.88518299814165 -0.037906778228606774 TPEEREWR ddPTM_KYSE-520_SHP099_60min_R1 2 TPEEREWR 8 1 Q6P4R8-3;Q6P4R8;Q6P4R8-2;E9PQ59;E9PJG2 Q6P4R8-3 NFRKB Nuclear factor related to kappa-B-binding protein 0 ; 60.91 0.037066 981900000.0 608570.0 546820.0 376510.0 378880.0 641160.0 612460.0 456870.0 473430.0 499990.0 483080.0 False True 574811.4089457814 520549.94640644686 400780.43703730026 414888.64128557395 691615.6442986239 608637.4099594986 503054.87822151475 471787.7818293926 409204.4197222054 478800.28703055234 1.200524361651234 1.0871963958810877 0.8370513717167558 0.8665171106280056 1.4444762524849777 1.2711717733800383 1.0506570105489823 0.9853540079421208 0.8546453099684419 1.0 18.86906449158337 -7.270474214680883 3.117100042533139 0.9302533680818795 1.109282640282184 0.16456250984573306 0.17135750083411383 0.5464247909190602 10.842779020787926 0.11523118925696484 0.05307319523348213 5.364457208283259e-08 7.270474214680883 0.1790292722003045 TPEFLR ddPTM_KYSE-520_SHP099_60min_R1 2 TPEFLR 6 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 126.04 0.057825 3420700000.0 3554200.0 3635900.0 2772500.0 2233400.0 3458000.0 3762900.0 2545800.0 3190400.0 2883800.0 3373200.0 False True 3357041.4408779526 3461225.9064028384 2951219.786156846 2445661.6645038053 3730124.9266714137 3739414.3453231216 2803154.3086136775 3179333.2470449586 2360174.614682086 3343316.0723098884 1.0041053158813613 1.0352673308603713 0.8827223398348503 0.7315077640308486 1.1156961669179786 1.11847467138803 0.8384353282748362 0.9509520423082122 0.7059382252936222 1.0 21.672848321048487 TPEKLDNTPAS(ph)PPRS(ph)PAEPNDIPIAK ddPTM_KYSE-520_SHP099_60min_R1 1 TPEKLDNTPASPPRSPAEPNDIPIAK 26 2 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3;H0Y911;Q4VXL4;O95359-2;H0Y8P9 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 2 TPEKLDNT(0.07)PAS(0.93)PPRS(1)PAEPNDIPIAK 168.69 1.8548e-10 1727300000.0 790640.0 857980.0 852370.0 853870.0 967890.0 1050200.0 839760.0 821200.0 1265400.0 1074800.0 True False 746781.6230982358 816761.3529457645 907315.1340402205 935021.5480746231 1044057.4364592223 1043645.3122480891 924651.1360678077 818351.4488695204 1035635.2581381204 1065278.108181747 0.7010203414138193 0.7667118536208735 0.8517166804346116 0.877725300926863 0.9800796885249574 0.9796928184597904 0.8679903669906761 0.7682045116521832 0.972173604417515 1.0 20.022798687960154 -4.737316702428754 1.4902706847527611 0.91494548928752 0.6911732006434261 0.5674637421287355 0.06611048491857996 0.4385673332651112 1.6086365620915077 0.0210385019243326 0.11309101080599891 1.8309787229399632e-05 4.737316702428754 -0.22377228864409382 TPELNLDQFHDK ddPTM_KYSE-520_SHP099_60min_R1 1 TPELNLDQFHDK 12 0 P27824;P27824-2;P27824-3;D6RGY2;D6RFL1;H0Y9Q7;H0Y9H1 P27824 CANX Calnexin 0 141.54 5.6247e-05 0.0 613770.0 606660.0 430450.0 490370.0 640770.0 576530.0 563710.0 617580.0 680080.0 604500.0 False True 579722.9545798384 577515.1429847749 458197.49574435083 536974.617364883 691194.9535174198 572931.6624170545 620695.3080794316 615437.7591242555 556594.6154216625 599144.6002938835 0.9675843766187351 0.9638994371333744 0.7647527750723325 0.8962354281445484 1.153636289433945 0.9562493964495861 1.0359691262759898 1.0271940343322465 0.9289821107436335 1.0 19.192544706083474 -5.584658629474365 24.999990358929097 1.0170629723672733 0.8927980349552469 0.36871861455560706 0.07609469181700294 71.35320837851124 28873.27396560063 0.022612116281563 0.02919212028487197 2.6022041822300685e-06 5.584658629474365 -0.12426493741202638 TPEPS(ph)SPVKEPPPVLAKPK ddPTM_KYSE-520_SHP099_60min_R1 1 TPEPSSPVKEPPPVLAKPK 19 2 A0A087WX60;Q86TC9-2;Q86TC9 A0A087WX60 MYPN Myopalladin 1 T(0.013)PEPS(0.52)S(0.467)PVKEPPPVLAKPK 55.588 0.035366 0.0 170020.0 162110.0 155620.0 127460.0 151720.0 180770.0 172070.0 196240.0 190160.0 233750.0 True False 160588.65167353261 154321.99226792922 165651.5142008036 139573.76007775348 163659.5008312858 179641.74737677307 189464.51484136857 195559.28924276037 155631.7375434999 231679.15685474814 0.6931510536108092 0.6661021835670863 0.715003958274327 0.602444181740784 0.7064058029781789 0.7753901983051498 0.8177883475299155 0.8440953079148452 0.6717554555029465 1.0 17.82176873160935 -6.323514934095013 2.3864374206087375 0.8193315233151901 0.6709307435249018 0.4683026380036832 0.07916795022531367 0.2866661739430372 3.206401469281265 0.02962719965158652 0.0262632713837654 4.747719646656861e-07 6.323514934095013 -0.14840077979028832 TPEPVVPTAPELRPSTSTDRPVT(ph)PKPTSR ddPTM_KYSE-520_SHP099_60min_R1 2 TPEPVVPTAPELRPSTSTDRPVTPKPTSR 29 3 Q14676;Q14676-2 Q14676 MDC1 Mediator of DNA damage checkpoint protein 1 1 TPEPVVPTAPELRPS(0.096)T(0.096)S(0.096)T(0.096)DRPVT(0.446)PKPT(0.096)S(0.073)R;TPEPVVPT(0.009)APELRPS(0.033)T(0.033)S(0.033)T(0.033)DRPVT(0.825)PKPT(0.017)S(0.017)R 116.97 0.00019771 4412200000.0 1309390.0 1480700.0 1086220.0 864510.0 820090.0 1202850.0 1063980.0 1290590.0 1402320.0 1262750.0 True False 1236755.5264957487 1409564.949423987 1156239.4792134503 946672.7704755916 884626.4173261871 1195342.5669754467 1171537.4818441274 1286113.2445159713 1147694.0376104368 1251563.0174046352 0.9881688011686437 1.126243688749289 0.9238364054661369 0.7563924127757513 0.70681731964295 0.9550798084895694 0.9360595236135559 1.0276056631834511 0.9170085897795291 1.0 20.255299503265555 -9.496624612990987 23.177884386075934 0.9999999999999941 0.9248138664860981 0.03546953381815432 0.11495504549319316 0.0 0.0 0.12506330198477303 0.030332306115984593 3.186951006217224e-10 9.496624612990987 -0.07518613351389603 TPES(ph)FLGPNAALVDLDSLVSRPGPTPPGAK ddPTM_KYSE-520_SHP099_60min_R1 1 TPESFLGPNAALVDLDSLVSRPGPTPPGAK 30 1 Q9Y6I3-3;Q9Y6I3;Q9Y6I3-1 Q9Y6I3-3 EPN1 Epsin-1 1 T(0.147)PES(0.853)FLGPNAALVDLDSLVSRPGPTPPGAK 142.25 3.3698e-08 20574000.0 29635.0 28062.0 21066.0 16620.0 17078.0 23655.0 16793.0 19443.0 29023.0 18558.0 True False 27991.087474092124 26713.859398079265 22423.948066791738 18199.55980301479 18421.94143947204 23507.36037062327 18490.6003238862 19375.55677103032 23753.15481029133 18393.590557905532 1.52178485141182 1.4523460938189523 1.2191174961842328 0.9894511757081953 1.001541345691982 1.2780191173995579 1.005274107068724 1.053386325526461 1.2913821657339364 1.0 14.166915510982685 -4.828760343399653 2.8542069149188944 1.0915881022368188 1.507218250051656 0.6891859841692115 0.10601938058061178 0.1418580011066674 2.299607381601803 0.028674455420578313 0.0788113248901566 1.483336408445742e-05 4.828760343399653 0.4156301478148372 TPESQPDT(ph)PPGTPLVSQDEKR ddPTM_KYSE-520_SHP099_60min_R1 7 TPESQPDTPPGTPLVSQDEKR 21 1 A0A0D9SEV0;M0R000;M0QYI1;A0A0D9SFD6;M0R3C8;A0A0D9SFL2;M0QYH2;Q96T60-2;Q96T60 A0A0D9SEV0 PNKP Bifunctional polynucleotide phosphatase/kinase;Polynucleotide 3-phosphatase;Polynucleotide 5-hydroxyl-kinase 1 TPES(0.002)QPDT(0.998)PPGTPLVSQDEKR;TPES(0.001)QPDT(0.999)PPGTPLVSQDEKR;TPESQPDT(0.997)PPGT(0.003)PLVSQDEKR;TPESQPDT(0.999)PPGT(0.001)PLVSQDEKR;TPESQPDT(0.995)PPGT(0.004)PLVSQDEKR;TPESQPDT(0.999)PPGT(0.001)PLVSQDEKR;TPESQPDT(1)PPGTPLVSQDEKR 169.6 6.087199999999999e-09 9093360000.0 5663280.0 5884780.0 4550390.0 3523300.0 3886300.0 5476620.0 3916450.0 4901640.0 6318450.0 5216340.0 True False 5349126.568931214 5602066.335565134 4843715.420281428 3858153.3726812317 4192129.6999777653 5442438.383130959 4312362.986868586 4884637.354891379 5171178.755162637 5170127.2858511135 1.0346218329227523 1.0835451480848626 0.936865797006011 0.7462395332586279 0.8108368456324477 1.0526700953814172 0.8340922279940888 0.9447808699524626 1.000203373969999 1.0 22.301768368704938 -4.845752192948486 5.344724860183379 0.904217482299607 1.0583760030108704 0.2838648392339862 0.09065542330456959 0.23395347564189836 10.980327147328861 0.02468312707552642 0.053972076569117074 1.4264212728849241e-05 4.845752192948486 0.15415852071126346 TPFNTDLGENS(ph)GIGK ddPTM_KYSE-520_SHP099_60min_R1 4 TPFNTDLGENSGIGK 15 0 Q6P0N0 Q6P0N0 MIS18BP1 Mis18-binding protein 1 1 TPFNTDLGENS(1)GIGK;TPFNTDLGENS(1)GIGK;TPFNTDLGENS(1)GIGK;TPFNTDLGENS(1)GIGK 214.46 3.9866000000000005e-14 881872000.0 1368270.0 1288460.0 1239930.0 1189090.0 1107040.0 1172350.0 1140240.0 1285150.0 1468120.0 1478230.0 True False 1292369.3355213772 1226560.4475821124 1319857.8717581437 1302100.7560870547 1194157.7498040257 1165032.9287888468 1255506.586870007 1280692.1146062645 1201546.4162934537 1465134.0322455366 0.8820826675772647 0.8371660343608465 0.9008444570325518 0.8887246677980656 0.8150501752892879 0.7951715700735311 0.8569226836849566 0.8741125974962255 0.8200931722621339 1.0 20.48260121950817 -10.437873282939725 5.595674900941077 1.000105651705334 0.8523087136017666 0.6414161968537085 0.033143657318860376 4.639716127221216e-05 4.660981625140272e-06 0.03408367325105452 0.008260611125537255 3.648603891980806e-11 10.437873282939725 -0.1477969381035673 TPGDFSYAYQKPEET(ph)TRSPDEEDYDYESYEK ddPTM_KYSE-520_SHP099_60min_R1 2 TPGDFSYAYQKPEETTRSPDEEDYDYESYEK 31 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPGDFS(0.005)Y(0.012)AY(0.038)QKPEET(0.314)T(0.314)RS(0.314)PDEEDY(0.001)DYESYEK;T(0.004)PGDFS(0.019)Y(0.018)AY(0.018)QKPEET(0.313)T(0.313)RS(0.313)PDEEDY(0.001)DYESYEK 57.156000000000006 0.037000000000000005 3223000000.0 1514220.0 1631890.0 1249980.0 1608740.0 1277360.0 1317930.0 1388140.0 1527100.0 1697990.0 1340900.0 True False 1430223.1980772654 1553491.5548831702 1330555.710838715 1761634.1659146813 1377880.9648157868 1309704.3100086893 1528466.7381408561 1521802.8465278193 1389677.8188445906 1329020.6692044127 1.0761481978556702 1.1688994692709571 1.0011550171264239 1.3255129936912438 1.0367641352339714 0.9854657195005954 1.150069952678642 1.1450558157525204 1.0456404862961903 1.0 20.341932111204496 TPGDFSYAYQKPEETTRS(ph)PDEEDYDYESYEK ddPTM_KYSE-520_SHP099_60min_R1 10 TPGDFSYAYQKPEETTRSPDEEDYDYESYEK 31 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPGDFSYAYQKPEET(0.139)T(0.139)RS(0.722)PDEEDYDYESYEK;TPGDFS(0.001)YAYQKPEET(0.138)T(0.138)RS(0.723)PDEEDYDYESYEK;TPGDFSYAYQKPEET(0.014)T(0.088)RS(0.898)PDEEDYDYESYEK;TPGDFSYAYQKPEET(0.036)T(0.036)RS(0.928)PDEEDYDYESYEK;TPGDFSYAYQKPEET(0.103)T(0.103)RS(0.794)PDEEDYDYESYEK;TPGDFSYAYQKPEET(0.103)T(0.103)RS(0.794)PDEEDYDYESYEK;TPGDFSYAYQKPEET(0.103)T(0.103)RS(0.794)PDEEDYDYESYEK;TPGDFSYAYQKPEET(0.128)T(0.128)RS(0.744)PDEEDYDYESYEK;TPGDFSYAYQKPEET(0.109)T(0.109)RS(0.782)PDEEDYDYESYEK;TPGDFSYAYQKPEET(0.143)T(0.143)RS(0.713)PDEEDYDYESYEK 330.95 2.7475e-79 52423920000.0 13781480.0 12796010.0 10626480.0 13520630.0 12090280.0 12100090.0 12154300.0 13652580.0 15754010.0 11829390.0 True False 13016993.831700739 12181270.472397419 11311479.90376915 14805626.610074366 13041716.251716847 12024568.850009516 13382975.258536885 13605222.38651614 12893478.910273852 11724590.80772615 1.110230117636424 1.0389505844733047 0.9647654309875981 1.2627840794510206 1.112338713187564 1.0255853741254397 1.141444974754932 1.1604006152223847 1.0996954283280778 1.0 23.483034237274946 -5.213658319346535 24.999600860820088 1.1186053204571877 1.0380789639172332 0.1771427789112674 0.0753354331698193 679.0045851747686 355262.14650086453 0.020269838231536618 0.03510826107552601 6.114228719259496e-06 5.213658319346535 -0.08052635653995455 TPGFSVQSIS(ph)DFEK ddPTM_KYSE-520_SHP099_60min_R1 2 TPGFSVQSISDFEK 14 0 Q9NY61 Q9NY61 AATF Protein AATF 1 TPGFSVQS(0.112)IS(0.888)DFEK;TPGFSVQS(0.004)IS(0.996)DFEK 213.7 8.7672e-14 317750000.0 245758.0 273980.0 199890.0 204033.0 211101.0 225400.0 224040.0 232810.0 284550.0 267570.0 True False 232125.31383357284 260817.58954763558 212775.22923530833 223424.23497524165 227713.44769961303 223993.1949921154 246688.14961969087 232002.43644826268 232882.89292176528 265199.5379663101 0.875285513744225 0.9834767871306352 0.8023212667223366 0.8424759586256314 0.8586494887805606 0.844621362125339 0.9301982632074915 0.8748221743800147 0.8781421517836497 1.0 18.016718736409583 -9.884635952751495 0.5878824521295728 1.0277223326721916 0.8742980226820699 0.38161095641540255 0.04719537863567826 23.948600670637283 5.134426223718755 1.2684768277913483 0.020222711740700432 1.304259615672702e-10 9.884635952751495 -0.1534243099901217 TPGHPPPPEIPSELGACDFEKPES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 TPGHPPPPEIPSELGACDFEKPESPR 26 1 Q92538-3;Q92538-2;A0A669KB10;A0A669KBG8;Q92538 Q92538-3 GBF1 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 1 TPGHPPPPEIPSELGACDFEKPES(1)PR;TPGHPPPPEIPSELGACDFEKPES(1)PR;TPGHPPPPEIPSELGACDFEKPES(1)PR;TPGHPPPPEIPSELGACDFEKPES(1)PR;TPGHPPPPEIPSELGACDFEKPES(1)PR;TPGHPPPPEIPSELGACDFEKPES(1)PR;TPGHPPPPEIPSELGACDFEKPES(1)PR;TPGHPPPPEIPSELGACDFEKPES(1)PR;TPGHPPPPEIPSELGACDFEKPES(1)PR 177.99 7.249700000000001e-11 33936330000.0 9859580.0 9098780.0 9089660.0 11107750.0 9757170.0 10616090.0 10878150.0 11547070.0 14056840.0 11462090.0 True False 9312649.442814548 8661660.951252777 9675594.027570207 12163427.220333194 10525003.76829685 10549831.044471374 11977819.562513128 11507015.909276396 11504472.200099764 11360544.799971076 0.8197361664238372 0.7624335895647214 0.851683981528319 1.0706728800861878 0.9264523800235045 0.9286377748801479 1.054334961343018 1.0128929652480834 1.01266905792485 1.0 23.43752868579447 -5.0870739843657296 4.809229611397283 0.996893994954949 0.7937627590165138 0.7883611160953413 0.045609543161746355 0.0957561556046534 3.766145657963382 0.012912040275176282 0.023484420394482397 8.183253701978257e-06 5.0870739843657296 -0.20313123593843518 TPGRQS(ph)PGPGHR ddPTM_KYSE-520_SHP099_60min_R1 4 TPGRQSPGPGHR 12 1 O15169-2;O15169 O15169-2 AXIN1 Axin-1 1 TPGRQS(1)PGPGHR;TPGRQS(1)PGPGHR;T(0.035)PGRQS(0.965)PGPGHR;T(0.044)PGRQS(0.956)PGPGHR 107.46 0.00030212 3318900000.0 1209590.0 978940.0 1039230.0 960060.0 986590.0 995680.0 902540.0 854170.0 1092740.0 980930.0 True False 1142491.6314421163 931910.2529811022 1106220.4286267909 1051303.8137474358 1064229.020070776 989465.591791257 993777.5511415611 851207.0836347768 894325.9617337204 972239.7233519917 1.1751130960820515 0.9585190057531844 1.1378062447529647 1.0813216005234334 1.0946158591439084 1.0177177171694607 1.0221527955217808 0.8755115257994904 0.9198615734917228 1.0 19.890952554780302 -6.849245786377758 1.7716583265173973 0.925619029153727 1.0823186580732878 0.5202670381508536 0.06259684023097438 0.27109440887112257 1.7242162338086655 0.033611917903013835 0.01932501209015219 1.41499274658343e-07 6.849245786377758 0.1566996289195608 TPGRT(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 3 TPGRTPGK 8 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 T(0.013)PGRT(0.987)PGK;T(0.003)PGRT(0.997)PGK;T(0.034)PGRT(0.966)PGK 84.65799999999999 0.015349000000000002 6268900000.0 7488600.0 6393600.0 5911000.0 5924500.0 5544900.0 7325800.0 6744200.0 5591600.0 7566900.0 8805700.0 True False 7073192.429846008 6086441.859010745 6292032.517934388 6487562.698734121 5981252.08383468 7280076.9648324605 7425969.553049092 5572204.044689256 6192941.706026026 8727688.348730933 0.8104313705099816 0.697371585214286 0.7209277263949615 0.7433311593530328 0.6853191641179988 0.8341357612627214 0.85085182425526 0.6384513083008393 0.7095741115603106 1.0 23.057168155659408 -6.259593896847603 24.9849786701829 0.7867713829233245 0.7296540844743956 0.11924557851682549 0.09464159937672414 479.8128862969532 6495954.749826924 0.03199285373120967 0.0304098461108113 5.500549827512448e-07 6.259593896847603 -0.05711729844892888 TPGVLLPGAGGAAGFGMTS(ph)PPPPTS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 TPGVLLPGAGGAAGFGMTSPPPPTSPSR 28 0 Q96L91-4;Q96L91-3;Q96L91-5;Q96L91-2;Q96L91;A0A0A0MR72;A0A0A0MR80;Q6ZTU2-4;Q6ZTU2-5;Q6ZTU2-2;Q6ZTU2-6;Q6ZTU2 Q96L91-4 EP400;EP400NL E1A-binding protein p400;EP400 N-terminal-like protein 2 TPGVLLPGAGGAAGFGMT(0.23)S(0.754)PPPPT(0.19)S(0.646)PS(0.179)R 51.538999999999994 0.055072 94132000.0 158520.0 178060.0 152600.0 172640.0 186690.0 134780.0 145180.0 169950.0 205390.0 150200.0 True False 149726.57959821442 169505.730326491 162436.8401686327 189047.6536938914 201381.44087920367 133938.78802589743 159856.2112202583 169360.48311662837 168096.35346055668 148869.34485383166 1.0057583026594525 1.1386207851785828 1.0911369317042565 1.269889740426473 1.3527394849284207 0.8997069756530877 1.0738020737393192 1.137645116144738 1.1291535784321693 1.0 17.18368717946126 -6.268769431102688 24.999851250777578 1.0582731653324502 1.170782400262239 0.24242800758287153 0.10846449970692762 1035.9536018232247 3533212.0411014315 0.04042989840029181 0.036351762946264875 5.385556282408718e-07 6.268769431102688 0.1125092349297887 TPHDILEDINAS(ph)PEMR ddPTM_KYSE-520_SHP099_60min_R1 9 TPHDILEDINASPEMR 16 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR;TPHDILEDINAS(1)PEMR 264.03 1.603e-29 3476270000.0 1502187.0 1369675.0 1370501.0 1309940.0 1347009.0 1363198.0 1194879.0 1315022.0 1540988.0 1354632.0 True False 1418857.6925744552 1303873.7570759102 1458845.687339131 1434436.3037521762 1453010.9448671849 1354689.7756293754 1315669.0302152561 1310460.495610442 1261183.4243462482 1342631.0143677478 1.0567741079946695 0.9711333516974591 1.0865574172857233 1.0683771553032835 1.0822116644992112 1.0089814410158744 0.9799185451073553 0.9760391958676338 0.9393373241419917 1.0 20.356631443051675 -6.569027780309732 3.129114966553645 0.9715593363895013 1.0511235521088669 0.5572287662142664 0.033173037667368205 0.20307877520799078 4.078648937256777 0.014124995005189264 0.010888752802164189 2.69756687294157e-07 6.569027780309732 0.07956421571936556 TPHPVLT(ph)PVAANQAK ddPTM_KYSE-520_SHP099_60min_R1 3 TPHPVLTPVAANQAK 15 0 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3;A0A0A0MSW3;H0Y837;A0A494C104 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 1 TPHPVLT(1)PVAANQAK;TPHPVLT(1)PVAANQAK;TPHPVLT(1)PVAANQAK 230.45 5.4239e-15 2066590000.0 1943240.0 2232870.0 1631470.0 1511470.0 1480730.0 2059090.0 1517370.0 1940060.0 2260770.0 1965180.0 True False 1835444.6034470971 2125599.5735937995 1736637.166644294 1655119.6543599754 1597255.0267987712 2046238.4555293473 1670760.567704117 1933330.384673407 1850271.1573738873 1947770.0340869026 0.9423312666926501 1.0912990426974414 0.8916027745844309 0.8497510616728842 0.8200429202863008 1.0505544390349992 0.8577812259481417 0.9925865737942391 0.9499433326282165 1.0 20.893391923198696 -9.156866064500147 12.803144242142746 0.9999999999709857 0.9379792926481278 0.04670146122288987 0.08342653200338943 0.0 0.0 0.0825359885139377 0.020017917562219482 6.968413853858443e-10 9.156866064500147 -0.062020707322857804 TPHS(ph)PPLAK ddPTM_KYSE-520_SHP099_60min_R1 8 TPHSPPLAK 9 0 Q8IZW8 Q8IZW8 TNS4 Tensin-4 1 T(0.011)PHS(0.989)PPLAK;T(0.028)PHS(0.972)PPLAK;T(0.019)PHS(0.981)PPLAK;T(0.237)PHS(0.763)PPLAK;T(0.012)PHS(0.988)PPLAK;T(0.482)PHS(0.518)PPLAK;T(0.008)PHS(0.992)PPLAK;T(0.013)PHS(0.987)PPLAK 101.95 0.0014552 9453800000.0 14885080.0 13241840.0 12591710.0 12836190.0 13620880.0 14496260.0 13019990.0 14011760.0 17679650.0 15245740.0 True False 14059374.93972867 12605682.129992926 13403391.774048328 14056137.638258753 14692765.763794132 14405783.464225383 14336177.65205712 13963156.474929383 14469471.227707926 15110674.604606245 0.9304266889211483 0.8342236504881316 0.8870147842348827 0.930212449547022 0.9723434689881602 0.9533514446690562 0.9487450446247429 0.9240591065784013 0.9575661978252872 1.0 23.84906473417786 -5.355130868520828 3.109926011485613 0.9545006778244381 0.8779402844004104 0.5782040479322159 0.02850368716779115 0.17655997124538103 3.280061174054674 0.008062577600803806 0.012974306739596498 4.414374063688692e-06 5.355130868520828 -0.07656039342402776 TPHTATLR ddPTM_KYSE-520_SHP099_60min_R1 1 TPHTATLR 8 0 P41250 P41250 GARS Glycine--tRNA ligase 0 69.598 0.039833999999999994 174930000.0 66790.0 63856.0 54784.0 35064.0 49693.0 61210.0 43756.0 65114.0 58471.0 52725.0 False True 63085.025557435976 60788.261910189896 58315.46429749921 38396.47201762397 53603.55638550678 60827.96568530336 48179.283497407516 64888.13473172187 47854.14033396082 52257.89751942927 1.2071864455316295 1.163235889610543 1.1159167717342198 0.7347496520185933 1.0257503445403098 1.1639956556363136 0.9219521983159513 1.2416904967827442 0.9157303030832583 1.0 15.67336146174068 -5.010939630782526 24.618144666248956 1.008294661250778 1.1738025432726602 0.2509176264278169 0.1308304668136553 638.7328380828559 1437393.0685933197 0.03515885798694848 0.06624269594391687 9.751251758257369e-06 5.010939630782526 0.16550788202188227 TPHVQAVQGPLGS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 5 TPHVQAVQGPLGSPPK 16 0 Q15149 Q15149 PLEC Plectin 1 TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK;TPHVQAVQGPLGS(1)PPK 147.67 6.6294000000000004e-06 7541290000.0 1780880.0 1746970.0 1431860.0 1326110.0 1359050.0 1606940.0 1385770.0 1628980.0 1882990.0 1629370.0 True False 1682091.0363037356 1663042.9389445693 1524159.986657003 1452143.0956904916 1465999.5030632673 1596910.4913958726 1525857.1554118837 1623329.4485867897 1541086.482315078 1614935.049430676 1.0415843268103782 1.0297893649226655 0.9437902701996129 0.8991959746012234 0.9077761384769536 0.9888388340811862 0.9448411909505614 1.005197979422809 0.9542714939887939 1.0 20.62304471210804 -4.736753884463452 7.4681801193870045 0.9527455724953338 1.036506545851039 0.4733996055870259 0.03374324955820849 0.1561886117832384 33.306984103093164 0.00920600344016301 0.023569096857013444 1.833353092836484e-05 4.736753884463452 0.0837609733557052 TPHVQAVQGPLGS(ph)PPKR ddPTM_KYSE-520_SHP099_60min_R1 5 TPHVQAVQGPLGSPPKR 17 1 Q15149 Q15149 PLEC Plectin 1 TPHVQAVQGPLGS(1)PPKR;TPHVQAVQGPLGS(1)PPKR;TPHVQAVQGPLGS(1)PPKR;TPHVQAVQGPLGS(1)PPKR;TPHVQAVQGPLGS(1)PPKR 106.35 0.00027448 3888270000.0 1917969.0 1644627.0 1499306.0 1563440.0 1814520.0 1595140.0 1525426.0 1566807.0 1966680.0 1512562.0 True False 1811575.4361935887 1565616.6502845436 1595953.6637344186 1712028.867534625 1957312.4007934649 1585184.1395728618 1679630.9468031 1561372.1122125038 1609580.4879682923 1499161.8774354288 1.2083921446112253 1.0443279500695395 1.064563932525131 1.141990663785649 1.3056044382223622 1.0573802358719184 1.1203799750273762 1.0414966760517526 1.073653560829437 1.0 20.515724741245183 -7.249520254025753 1.3199837124772447 1.027490159013908 1.1381747967576838 0.2696816674673146 0.07457704370700369 0.7207306978749591 2.230532075591067 0.06515766115540685 0.025203712379174174 5.629628620981997e-08 7.249520254025753 0.1106846377437758 TPILEDFELEGVCQLPDQS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 TPILEDFELEGVCQLPDQSPPR 22 0 Q7Z2Z1;Q7Z2Z1-2;H0YN97 Q7Z2Z1 TICRR Treslin 1 TPILEDFELEGVCQLPDQS(1)PPR 82.609 0.0036366 30899000.0 21921.0 25345.0 17365.0 16558.0 21511.0 27150.0 18564.0 21344.0 22833.0 22056.0 True False 20704.998431569897 24127.38815637939 18484.37568498237 18131.66734165576 23203.793319152297 26980.54677921887 20440.630287180575 21269.96264572705 18687.10277308967 21860.60099930835 0.9471376579365308 1.1036928105106882 0.8455566105235258 0.8294221802149644 1.0614435220644869 1.234208829852048 0.9350442967156894 0.9729816049613647 0.8548302388246743 1.0 14.416045444182455 -3.954707614493345 18.14933508208189 0.9835596276747021 0.7053820937052744 0.007260299305930418 0.12059571465467732 13317.890857778375 156072.31825780185 0.030834949779697383 138487.06551233993 0.00011099218103241823 3.954707614493345 -0.2781775339694277 TPIS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 10 TPISPLK 7 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.048)PIS(0.952)PLK;T(0.009)PIS(0.991)PLK;T(0.001)PIS(0.999)PLK;TPIS(1)PLK;TPIS(1)PLK;T(0.001)PIS(0.999)PLK;T(0.184)PIS(0.816)PLK;TPIS(1)PLK;TPIS(1)PLK;TPIS(1)PLK 125.83 0.0022586999999999998 274045100000.0 147917900.0 148998900.0 121095600.0 96368800.0 102591500.0 142443300.0 115608600.0 135734500.0 148177900.0 148783000.0 True False 139712599.21997666 141840769.19209132 128901616.1358105 105527661.77766374 110664867.38421342 141554258.52804056 127295445.51920614 135263668.7001705 121272528.62088215 147464898.37142247 0.9474295290807446 0.9618612344941536 0.8741172818709961 0.7156120740806353 0.7504488770302465 0.9599183269465613 0.8632253975355194 0.917260108636019 0.8223823429181829 1.0 27.13579634427083 -8.757481188448008 13.170831444564364 0.9999999998761684 0.8670355534808121 0.1937639685887833 0.08073717685131342 0.0 0.0 0.08506004648595909 0.02063009154009163 1.747908971803809e-09 8.757481188448008 -0.13296444639535632 TPIS(ph)PLKTGVSKPIVK ddPTM_KYSE-520_SHP099_60min_R1 2 TPISPLKTGVSKPIVK 16 2 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.03)PIS(0.966)PLKT(0.004)GVSKPIVK;T(0.001)PIS(0.999)PLKTGVSKPIVK 94.85600000000001 0.0010091000000000002 3218300000.0 2809300.0 4213800.0 4175700.0 1501640.0 2027320.0 2046260.0 1082910.0 1220370.0 4373300.0 2159820.0 True False 2653462.5287992917 4011362.722957251 4444872.303356225 1644355.4141154708 2186858.5501270904 2033488.532318392 1192381.110983124 1216136.8213064987 3579218.96192148 2140685.6751145325 1.2395386018815324 1.8738681580342862 2.0763778424024872 0.7681442601457561 1.0215691988549827 0.9499239220207305 0.5570089643914342 0.5681062079520068 1.671996502583212 1.0 21.029641544288804 -5.26968994052509 24.995931882037063 0.9044522889221279 1.7443222034142496 0.5147668938284614 0.35331469661528897 451.5854612101328 1368124.5247427705 0.09918184229847601 0.14994806175017383 5.374153408486144e-06 5.26968994052509 0.8398699144921217 TPITSVPLGPLAS(ph)SPTK ddPTM_KYSE-520_SHP099_60min_R1 1 TPITSVPLGPLASSPTK 17 0 Q15911 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 TPITSVPLGPLAS(0.491)S(0.491)PT(0.017)K 86.49700000000001 0.0019979 790840000.0 794740.0 1012500.0 818570.0 685510.0 627950.0 978970.0 697920.0 993710.0 1024900.0 1106400.0 True False 750654.1879250878 963857.980206516 871336.3319583081 750660.6642939037 677366.0924532419 972859.8850995175 768472.5646428067 990263.0519436583 838803.9956264879 1096598.1567661744 0.6845298647398222 0.878952763379519 0.7945812480004939 0.6845357706122478 0.6176976390793583 0.887161700114875 0.7007786397425677 0.9030318406369621 0.7649146503219452 1.0 20.06460352309748 -8.580604834466559 0.5709688065715698 1.00806978220368 0.7509417888479212 0.3858365770688281 0.09097119237483844 2.198591388484149 1.1991419628721491 0.13843170050420778 0.04095683149233731 2.626607412438899e-09 8.580604834466559 -0.25712799335575875 TPITSVPLGPLASS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 1 TPITSVPLGPLASSPTK 17 0 Q15911 Q15911 ZFHX3 Zinc finger homeobox protein 3 1 TPITSVPLGPLAS(0.016)S(0.984)PTK 220.59 3.5089999999999996e-18 612540000.0 593460.0 836580.0 566780.0 486480.0 475150.0 740810.0 564720.0 782390.0 721060.0 706900.0 True False 560539.5907668199 796389.4410678196 603315.5456800637 532714.9129344547 512541.60176631546 736186.3300004825 621807.4087360807 779676.0717011993 590133.6804433949 700637.4159598781 0.8000423300244061 1.1366641617001862 0.8610952426134952 0.7603289530357604 0.7315361556364071 1.050737961220501 0.887488156601229 1.112809641536254 0.8422811385756607 1.0 19.41830850850657 -6.284965868747832 24.980789609835565 0.9800155241086117 0.8681715757094959 0.18551058014556643 0.12555740586841405 1579.1710719311643 1676782.4447230266 0.04556038492653277 0.040203889709220716 5.188408130845604e-07 6.284965868747832 -0.11184394839911582 TPKPLS(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 2 TPKPLSLK 8 1 Q52LW3;F8VWZ8 Q52LW3 ARHGAP29 Rho GTPase-activating protein 29 1 T(0.001)PKPLS(0.999)LK;TPKPLS(1)LK 57.175 0.030264 1056010000.0 1583620.0 1330640.0 1179320.0 1159450.0 1248910.0 1440410.0 1227820.0 1452390.0 1553370.0 1467390.0 True False 1495773.4417317968 1266714.05706864 1255340.8541787176 1269643.779398646 1347192.1116741425 1431419.8668970398 1351940.0279684379 1447351.9980803756 1271317.1652710699 1454390.0662121456 1.0284541104075546 0.8709589583265689 0.8631390459425803 0.872973357625676 0.9262935322315612 0.9842063007381988 0.9295580734331255 0.9951608111913882 0.8741239333283705 1.0 20.471982820094095 -6.003184561107544 24.078085312758528 0.9546870078685135 0.9024963243386573 0.13795084587055284 0.055646408007082156 151.3466456468336 1144338.0558537198 0.017102475851916307 0.018997045339271705 9.926940958871566e-07 6.003184561107544 -0.05219068352985612 TPLALAGS(ph)PTPK ddPTM_KYSE-520_SHP099_60min_R1 5 TPLALAGSPTPK 12 0 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785 M0QXA7 WIZ Protein Wiz 1 TPLALAGS(1)PTPK;TPLALAGS(1)PTPK;TPLALAGS(0.943)PT(0.057)PK;TPLALAGS(1)PTPK;TPLALAGS(0.999)PT(0.001)PK 157.43 6.1073e-06 3168910000.0 5223320.0 5758560.0 4173130.0 3814550.0 4099350.0 5973940.0 4797170.0 5949830.0 6924050.0 6797590.0 True False 4933572.027169722 5481910.133825221 4442136.63704408 4177083.6851137206 4421945.522889078 5936654.424539468 5282114.759467468 5929191.4284307575 5666817.06109629 6737368.641045 0.7322698652874218 0.8136574419319511 0.659328125520987 0.6199874027474669 0.6563312412430518 0.8811532722690179 0.7840026338009886 0.8800455703595149 0.8411024189137049 1.0 22.683753809135826 -6.2662481316490855 24.963679419309063 0.8639349997875838 0.6965386204691889 0.6189993461133823 0.07059398151748457 309.8951243060731 1608753.7324373499 0.025530919072401983 0.023227346992089375 5.4169130976381e-07 6.2662481316490855 -0.1673963793183949 TPLDLFAHFGPEPGDHS(ph)DPLPPSAPS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 1 TPLDLFAHFGPEPGDHSDPLPPSAPSPTR 29 0 Q8N1G0;F8WCX2;Q8N1G0-2 Q8N1G0 ZNF687 Zinc finger protein 687 2 TPLDLFAHFGPEPGDHS(0.988)DPLPPS(0.105)APS(0.858)PT(0.049)R 70.616 0.014375 89271000.0 18177.0 17767.0 19245.0 21241.0 16865.0 16009.0 17934.0 19353.0 21991.0 13671.0 True False 17168.685575048836 16913.446651189304 20485.563493088724 23259.738253660475 18192.17955127627 15909.081892762975 19746.94373897309 19285.86896002416 17997.988747996995 13549.88557587706 1.2670723659552037 1.2482353859356872 1.5118624713377131 1.7166003449556742 1.3426076146107029 1.17411189959316 1.457351328053182 1.423323381738286 1.3282760689904953 1.0 13.72599304811666 -5.981773366709167 24.912929857116076 1.308143366833674 1.4406635620404733 0.1473737298521911 0.1724019852338638 556.8621660708804 761138.602267155 0.05613819503076396 0.06364309783955327 1.0428614968072235e-06 5.981773366709167 0.13252019520679936 TPLDLFAHFGPEPGDHSDPLPPS(ph)APSPTR ddPTM_KYSE-520_SHP099_60min_R1 1 TPLDLFAHFGPEPGDHSDPLPPSAPSPTR 29 0 Q8N1G0;F8WCX2;Q8N1G0-2 Q8N1G0 ZNF687 Zinc finger protein 687 1 TPLDLFAHFGPEPGDHSDPLPPS(0.642)APS(0.273)PT(0.084)R 104.66 0.00019508 166570000.0 138470.0 151880.0 133710.0 108050.0 110120.0 152900.0 116780.0 119770.0 162350.0 145970.0 True False 130788.79306689855 144583.45682347217 142329.16054356412 118319.03951358305 118785.81750290783 151945.6943846247 128585.26206296847 119354.54582452808 132871.33251045016 144676.81936294172 0.904006555043188 0.9993546821123062 0.9837730824487635 0.8178161507460532 0.8210425002841488 1.050242153882634 0.888775842800322 0.8249735261673866 0.9184009787851648 1.0 17.142474261067118 -5.207528995039017 24.998615212009987 0.8978659329656389 0.9660758053624511 0.11160516210281335 0.07553184328565074 653.1466360777804 302867.27099714265 0.02084311882042449 0.03610131909690459 6.201132413136663e-06 5.207528995039017 0.0682098723968122 TPLDLFAHFGPEPGDHSDPLPPSAPS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 11 TPLDLFAHFGPEPGDHSDPLPPSAPSPTR 29 0 Q8N1G0;F8WCX2;Q8N1G0-2 Q8N1G0 ZNF687 Zinc finger protein 687 1 TPLDLFAHFGPEPGDHSDPLPPS(0.175)APS(0.655)PT(0.169)R;TPLDLFAHFGPEPGDHSDPLPPS(0.014)APS(0.965)PT(0.021)R;TPLDLFAHFGPEPGDHSDPLPPS(0.001)APS(0.967)PT(0.032)R;TPLDLFAHFGPEPGDHSDPLPPS(0.008)APS(0.961)PT(0.031)R;TPLDLFAHFGPEPGDHS(0.001)DPLPPS(0.005)APS(0.782)PT(0.213)R;TPLDLFAHFGPEPGDHSDPLPPS(0.119)APS(0.715)PT(0.166)R;TPLDLFAHFGPEPGDHSDPLPPS(0.08)APS(0.858)PT(0.062)R;TPLDLFAHFGPEPGDHSDPLPPS(0.005)APS(0.97)PT(0.025)R;TPLDLFAHFGPEPGDHSDPLPPS(0.002)APS(0.979)PT(0.019)R;TPLDLFAHFGPEPGDHSDPLPPS(0.295)APS(0.702)PT(0.003)R;TPLDLFAHFGPEPGDHSDPLPPS(0.208)APS(0.773)PT(0.018)R 243.15 7.8138000000000005e-31 6543983000.0 1713866.0 1601713.0 1456878.0 1366641.0 1388733.0 1699979.0 1268689.0 1536387.0 1812909.0 1509065.0 True False 1618794.4364728304 1524764.3032597736 1550790.6869672183 1496526.1497444012 1498018.3862900992 1689368.8004858075 1396940.4653314387 1531057.6320924219 1483730.4253168316 1495695.8581348036 1.0823018781983764 1.0194347299732578 1.036835582938045 1.0005551206183274 1.0015528077734948 1.129486848076535 0.9339736135082188 1.023642356007936 0.9920000896219012 1.0 20.512385409944226 -1.1811030869814172 1.0790932124465846 1.0144851571215376 74.55799418059094 0.1600090977839923 0.046217670441816704 3614.563833880334 5.21654790832714 0.01426910200543786 657525.700845912 0.06590174479815449 1.1811030869814172 73.5435090234694 TPLGAS(ph)LDEQSSSTLK ddPTM_KYSE-520_SHP099_60min_R1 10 TPLGASLDEQSSSTLK 16 0 P28290-3;P28290;E9PHV5 P28290-3 SSFA2 Sperm-specific antigen 2 1 TPLGAS(1)LDEQSSSTLK;T(0.005)PLGAS(0.99)LDEQS(0.003)S(0.001)STLK;TPLGAS(1)LDEQSSSTLK;TPLGAS(1)LDEQSSSTLK;TPLGAS(1)LDEQSSSTLK;TPLGAS(1)LDEQSSSTLK;TPLGAS(1)LDEQSSSTLK;TPLGAS(1)LDEQSSSTLK;TPLGAS(1)LDEQSSSTLK;TPLGAS(1)LDEQSSSTLK 335.98 1.5470999999999998e-58 8608750000.0 5747590.0 7179140.0 5114940.0 3897065.0 4729380.0 5330380.0 4897810.0 5972820.0 6974770.0 7258510.0 True False 5428759.72516339 6834243.338291163 5444657.216593366 4267440.885904688 5101555.299508738 5297111.121215937 5392928.432819215 5952101.681486667 5708327.5876434455 7194205.248435324 0.7546017298219421 0.9499650207752344 0.7568114932191475 0.5931775280991349 0.7091200658499813 0.7363024737677607 0.7496211529400177 0.8273466596996515 0.7934618752898323 1.0 22.778403889024847 -8.432483920526764 0.9392277134247723 0.9998877510334092 0.7514943435779671 0.4324926165037467 0.08360175074774519 1.567101914804883 2.260404389534318 0.09056651809548003 0.02948804281136125 3.694163215062577e-09 8.432483920526764 -0.24839340745544214 TPLLSSLS(ph)AT(ph)SNNSTVACIDR ddPTM_KYSE-520_SHP099_60min_R1 12 TPLLSSLSATSNNSTVACIDR 21 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 2 TPLLS(0.002)S(0.005)LS(0.949)AT(0.517)S(0.517)NNS(0.007)T(0.003)VACIDR;TPLLSS(0.002)LS(0.997)AT(0.582)S(0.409)NNS(0.005)T(0.005)VACIDR;TPLLSSLS(1)AT(0.64)S(0.36)NNSTVACIDR;TPLLS(0.005)S(0.027)LS(0.957)AT(0.442)S(0.443)NNS(0.106)T(0.02)VACIDR;TPLLSSLS(1)AT(0.748)S(0.252)NNSTVACIDR;TPLLS(0.007)S(0.033)LS(0.931)AT(0.435)S(0.435)NNS(0.135)T(0.023)VACIDR;TPLLSSLS(1)AT(0.725)S(0.272)NNS(0.002)TVACIDR;TPLLSSLS(1)AT(0.648)S(0.324)NNS(0.024)T(0.004)VACIDR;TPLLSS(0.002)LS(0.998)AT(0.759)S(0.241)NNSTVACIDR;TPLLSSLS(1)AT(0.572)S(0.405)NNS(0.02)T(0.004)VACIDR;TPLLSSLS(0.999)AT(0.804)S(0.188)NNS(0.007)T(0.001)VACIDR;TPLLS(0.005)S(0.059)LS(0.931)AT(0.55)S(0.442)NNS(0.009)T(0.003)VACIDR 296.01 6.2552e-44 18263990000.0 3220278.0 4144819.0 3213639.0 5041463.0 5416490.0 6570920.0 6950680.0 9175320.0 11031800.0 6498210.0 True False 3041642.759874962 3945695.6737398473 3420795.3119441997 5520602.127748872 5842736.947387635 6529908.4509209795 7653322.5664996905 9143492.956455784 9028703.209047029 6440640.914930873 0.4722577768345602 0.6126246946313721 0.5311265380459291 0.8571510507519304 0.9071670078427816 1.0138600392677015 1.1882858658922508 1.419655757435426 1.40183303623036 1.0 22.618772828903925 -5.940534523143312 0.8114156018776867 1.3052853624202874 0.5001207075710894 0.8397545454558362 0.12754250464715913 0.23377314835804552 0.3404431388725726 0.07467209211894978 0.1016058601181765 1.1467413604901151e-06 5.940534523143312 -0.805164654849198 TPLLSSLS(ph)ATS(ph)NNSTVACIDR ddPTM_KYSE-520_SHP099_60min_R1 1 TPLLSSLSATSNNSTVACIDR 21 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 2 TPLLSSLS(1)AT(0.204)S(0.796)NNSTVACIDR 237.84 2.132e-26 1357500000.0 517370.0 614850.0 534490.0 918060.0 863320.0 1078500.0 1201300.0 1622500.0 1806400.0 1254100.0 True False 488670.454748475 585311.6830913343 568944.0806142372 1005312.1463751951 931258.3723811343 1071768.6814507386 1322739.12755818 1616871.9261943484 1478403.2956382963 1242989.6496750372 0.393141209885562 0.47089023085940906 0.457722299427819 0.8087856134908447 0.7492084689720458 0.862250688677044 1.0641594062380102 1.3007927512647088 1.1893930862777535 1.0 20.245382852500843 -5.936140543299384 0.694308858873639 1.1940929887613112 0.3798505088890893 0.8794773529946984 0.1042041863577557 0.24540348793751662 0.2618244852778848 0.07201612644815437 0.10575123513683249 1.1584024215175145e-06 5.936140543299384 -0.8142424798722219 down TPLLSSLS(ph)ATSNNSTVACIDR ddPTM_KYSE-520_SHP099_60min_R1 8 TPLLSSLSATSNNSTVACIDR 21 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 TPLLSSLS(0.988)AT(0.006)S(0.006)NNSTVACIDR;TPLLSSLS(0.996)AT(0.003)S(0.001)NNSTVACIDR;TPLLSSLS(1)ATSNNSTVACIDR;TPLLSSLS(1)ATSNNSTVACIDR;TPLLSSLS(0.997)AT(0.002)S(0.001)NNSTVACIDR;TPLLSS(0.002)LS(0.879)AT(0.04)S(0.04)NNS(0.021)T(0.019)VACIDR;TPLLSSLS(1)ATSNNSTVACIDR;TPLLS(0.001)S(0.028)LS(0.848)AT(0.031)S(0.031)NNS(0.031)T(0.031)VACIDR 274.82 6.022100000000001e-36 11738370000.0 903299.0 1241632.0 759751.0 894616.0 1046039.0 1734609.0 1295864.0 1992516.0 2338039.0 1585175.0 True False 853191.2037880856 1181982.1349923708 808725.7651045804 979640.0356638916 1128356.318152238 1723782.6618104628 1426862.5795338815 1985604.427052732 1913510.0547668643 1571131.5827474894 0.5430424880747939 0.7523126312090295 0.5147409510350083 0.6235251371821848 0.7181806607050978 1.0971599582996272 0.9081750982554115 1.2638053036782828 1.2179183944737757 1.0 20.58337258116426 -6.2410662455212895 1.6471133589742941 1.131881888222719 0.6034767867972924 0.811475326906583 0.11293012629223642 0.1551011888350146 0.8346901438796456 0.04810883755139732 0.04444640172980961 5.740288954861759e-07 6.2410662455212895 -0.5284051014254266 TPLLSSLSAT(ph)SNNSTVACIDR ddPTM_KYSE-520_SHP099_60min_R1 6 TPLLSSLSATSNNSTVACIDR 21 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 TPLLSSLS(0.004)AT(0.396)S(0.396)NNS(0.153)T(0.05)VACIDR;TPLLSSLSAT(0.692)S(0.305)NNS(0.003)T(0.001)VACIDR;TPLLSSLSAT(0.767)S(0.221)NNS(0.01)T(0.002)VACIDR;TPLLSSLSAT(0.402)S(0.402)NNS(0.169)T(0.027)VACIDR;TPLLSSLSAT(0.678)S(0.322)NNSTVACIDR;TPLLSSLSAT(0.489)S(0.489)NNS(0.008)T(0.014)VACIDR 238.8 9.0929e-26 7421600000.0 1563120.0 2558512.0 1733393.0 2233255.0 2217656.0 3543859.0 2902618.0 4485665.0 5143930.0 3490611.0 True False 1476410.6175975322 2435597.243115191 1845130.2863068609 2445502.8837473984 2392172.910463392 3521740.4614532534 3196042.954261769 4470105.275077077 4209921.97992288 3459686.9021942625 0.4267468876045221 0.7039935439159087 0.5333229099825798 0.7068567049221619 0.6914420229605709 1.0179361777563265 0.9237954313827414 1.2920548597163428 1.2168505702792904 1.0 21.72221005080166 -6.339249102702654 1.0058092629251931 1.1780583745587825 0.5651521933360885 0.818081624695456 0.11543617033214745 0.20328060856885657 0.43142383388107014 0.06555024858736055 0.05522526607837041 4.57879180961987e-07 6.339249102702654 -0.612906181222694 TPLLSSLSAT(ph)SNNSTVACIDRNGLQSCPIKEDSFLQR ddPTM_KYSE-520_SHP099_60min_R1 1 TPLLSSLSATSNNSTVACIDRNGLQSCPIKEDSFLQR 37 2 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 TPLLSS(0.001)LS(0.177)AT(0.203)S(0.203)NNS(0.203)T(0.203)VACIDRNGLQS(0.009)CPIKEDSFLQR 117.29 8.565600000000001e-05 614930000.0 42554.0 64754.0 45376.0 52441.0 70282.0 80745.0 68396.0 99541.0 124080.0 60442.0 True False 40193.44479070413 61643.12064226444 48301.009564167005 57424.97687303841 75812.79355012144 80241.04050416309 75310.13516063361 99195.71550404395 101550.19980225839 59906.53090316444 0.6709359427885181 1.028988320854484 0.806272852658467 0.9585762354669255 1.2655180062532512 1.3394372749419965 1.2571272952254275 1.6558414251091969 1.6951440564369953 1.0 15.870425671177848 -5.882951592369198 1.098860653381047 1.460157289799407 0.8206701486266231 0.600363617735516 0.20308632826125883 0.32615124591215827 0.8405342988653736 0.09129761526785136 0.12012503468638482 1.3093278560699227e-06 5.882951592369198 -0.6394871411727839 TPLLSSLSATS(ph)NNS(ph)TVACIDR ddPTM_KYSE-520_SHP099_60min_R1 9 TPLLSSLSATSNNSTVACIDR 21 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 2 TPLLSSLS(0.034)AT(0.443)S(0.671)NNS(0.811)T(0.042)VACIDR;TPLLSSLS(0.116)AT(0.351)S(0.733)NNS(0.553)T(0.247)VACIDR;TPLLSSLSAT(0.212)S(0.798)NNS(0.968)T(0.022)VACIDR;TPLLSSLSAT(0.002)S(0.929)NNS(0.581)T(0.488)VACIDR;TPLLSSLSAT(0.005)S(0.994)NNS(0.68)T(0.321)VACIDR;TPLLSSLSAT(0.055)S(0.945)NNS(0.99)T(0.01)VACIDR;TPLLSSLSAT(0.053)S(0.947)NNS(0.978)T(0.022)VACIDR;TPLLSSLSAT(0.049)S(0.951)NNS(0.951)T(0.049)VACIDR;TPLLSSLSAT(0.039)S(0.961)NNS(0.999)T(0.001)VACIDR 341.19 3.3131999999999996e-65 2523254000.0 923092.0 1163156.0 1095054.0 1795041.0 1357106.0 1628055.0 1555659.0 2300577.0 2508510.0 1782296.0 True False 871886.2466217183 1107276.23982725 1165642.9329883486 1965641.156941243 1463902.5213231158 1617893.7048486602 1712920.193488745 2292596.8353457088 2053027.818391063 1766506.2440453055 0.49356533528299096 0.6268170540351917 0.659857805155006 1.1127281115292962 0.8286993189284029 0.9158720555347022 0.9696655187394932 1.2978141702435504 1.162196751532348 1.0 20.752467418036055 -4.390433373263897 0.430839616984437 1.1392427596868802 0.043049800912895245 0.7168697587541283 0.1291896364839546 2.6179331071842613 0.41296620797401823 0.10489813554639343 1.465365057003228 4.069739644138454e-05 4.390433373263897 -1.096192958773985 down TPLLSSLSATS(ph)NNSTVACIDR ddPTM_KYSE-520_SHP099_60min_R1 6 TPLLSSLSATSNNSTVACIDR 21 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 TPLLSSLS(0.001)AT(0.162)S(0.79)NNS(0.038)T(0.009)VACIDR;TPLLSSLSAT(0.424)S(0.576)NNSTVACIDR;TPLLSSLSAT(0.304)S(0.696)NNSTVACIDR;TPLLSSLSAT(0.189)S(0.811)NNSTVACIDR;TPLLSSLSAT(0.11)S(0.88)NNS(0.007)T(0.002)VACIDR;TPLLSSLS(0.154)AT(0.281)S(0.52)NNS(0.037)T(0.008)VACIDR 303.94 5.4368000000000004e-45 9784250000.0 1873430.0 3233030.0 2170920.0 2880990.0 2732720.0 4295730.0 3357010.0 5468370.0 6301600.0 4194670.0 True False 1769507.1033098851 3077710.385923038 2310860.976794813 3154798.4233987704 2947769.516950117 4268918.755649866 3696369.332060339 5449401.5007971525 5157388.290408705 4157508.4872038807 0.4256171956728732 0.7402775954386427 0.5558283245619963 0.7588194788077318 0.7090230906377849 1.026797364043606 0.8890828108799173 1.3107373123998431 1.240499762365438 1.0 21.987287777980303 -6.351522034790557 0.8883336883491196 1.1925946325884087 0.5831975186504191 0.7633409509380856 0.13093927299843514 0.26582078253274916 0.44584710788623294 0.08204010357349957 0.0695187960064507 4.451208782579635e-07 6.351522034790557 -0.6093971139379896 TPLLSSLSATS(ph)NNSTVACIDRNGLQSCPIKEDSFLQR ddPTM_KYSE-520_SHP099_60min_R1 1 TPLLSSLSATSNNSTVACIDRNGLQSCPIKEDSFLQR 37 2 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 TPLLSSLSAT(0.241)S(0.759)NNSTVACIDRNGLQSCPIKEDSFLQR 245.29 1.5897e-31 1418600000.0 77191.0 146220.0 108260.0 116610.0 132400.0 160330.0 140270.0 199070.0 238720.0 114770.0 True False 72909.06135355639 139195.37171930543 115238.61282212453 127692.5793399252 142819.12674704863 159329.32099860633 154449.86050327614 198379.47263328725 195374.46564148227 113753.22708970873 0.6409405976329658 1.2236608602719672 1.0130579656544108 1.1225402795757482 1.2555171435656747 1.4006575907772278 1.3577624517102533 1.7439458880304124 1.7175289935942206 1.0 16.795547948453898 -5.6262661080516905 0.7153658296170056 1.5240304106401426 0.8634488230341749 0.4667100075691183 0.23132089006295548 0.7105437723752227 0.7509541895794848 0.132278037228547 0.28426635271048917 2.364470456336448e-06 5.6262661080516905 -0.6605815876059676 TPLLSSLSATSNNSTVACIDRNGLQS(ph)CPIKEDSFLQR ddPTM_KYSE-520_SHP099_60min_R1 1 TPLLSSLSATSNNSTVACIDRNGLQSCPIKEDSFLQR 37 2 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 1 TPLLSSLS(0.07)AT(0.07)S(0.063)NNS(0.252)T(0.252)VACIDRNGLQS(0.279)CPIKEDS(0.013)FLQR 78.372 0.0042037 507230000.0 42118.0 41775.0 47605.0 56173.0 54985.0 68219.0 47594.0 76313.0 106500.0 61706.0 True False 39781.63057984856 39768.06629444663 50673.694470693066 61511.66503097171 59312.0066781456 67793.21991644677 52405.26599267792 76048.28801458805 87162.28464652257 61159.332846541576 0.6504588707608527 0.6502370847345734 0.8285521131801972 1.0057608899252415 0.9697948606955669 1.1084689247109787 0.8568645790197059 1.243445349631351 1.4251673553278696 1.0 15.90028504876884 -4.9264205982114255 0.48075988919099893 1.1862120820152844 0.4117600524513059 0.6383669642762703 0.139783906187597 1.7181282889982539 0.48345940834233414 0.1069554518472381 0.7068876542836547 1.1846209307035105e-05 4.9264205982114255 -0.7744520295639785 TPLS(ph)PS(ph)PMK ddPTM_KYSE-520_SHP099_60min_R1 1 TPLSPSPMK 9 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 2 TPLS(1)PS(1)PMK 124.67 0.00071457 171100000.0 655100.0 566550.0 492140.0 606100.0 588400.0 585850.0 591550.0 627500.0 583300.0 650220.0 True False 618760.2970905257 539332.0875911128 523864.1318518417 663703.5617693894 634703.7324619605 582193.4928399764 651349.646971648 625323.3489596007 477387.42379640084 644459.5566635052 0.9601227737144135 0.8368749939613619 0.8128735565098765 1.029860687000305 0.984862007086911 0.9033825114707081 1.0106912687334706 0.9703065809079217 0.7407562179199113 1.0 19.29773029891704 -5.249856181556423 24.895918658590443 0.9495341767517675 0.8666489033114984 0.1511037275486955 0.08523657881324058 1332.9408547271341 2864900.8160947943 0.023136283083743693 0.03966342061371281 5.625275777218779e-06 5.249856181556423 -0.08288527344026919 TPLS(ph)PSPMK ddPTM_KYSE-520_SHP099_60min_R1 8 TPLSPSPMK 9 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 T(0.444)PLS(0.556)PS(0.001)PMK;TPLS(0.99)PS(0.01)PMK;TPLS(0.998)PS(0.002)PMK;TPLS(0.989)PS(0.011)PMK;TPLS(0.647)PS(0.353)PMK;TPLS(0.762)PS(0.238)PMK;TPLS(0.762)PS(0.238)PMK;TPLS(0.72)PS(0.28)PMK 157.75 0.00058339 16786410000.0 18365040.0 20305500.0 17319390.0 13842110.0 16041620.0 24234000.0 21772800.0 28670400.0 33834300.0 31594700.0 True False 17346294.62140042 19329993.300823126 18435825.59140379 15157659.972617893 17304004.229667623 24082746.616854116 23973807.10605073 28570949.07412166 27690844.01329426 31314795.53830462 0.5539328717692642 0.6172798821942955 0.5887257213240583 0.4840414798198784 0.5525823794219306 0.7690532926327373 0.7655744415359728 0.9123785923868909 0.8842735051366534 1.0 24.900341123488342 -6.769388649911023 1.115177554767283 0.9437569742044536 0.5563016345615557 0.9027517868020116 0.052685037215790556 0.15401996146970454 0.38020086214791926 0.03869254513301978 0.02181613480749883 1.70063592899069e-07 6.769388649911023 -0.3874553396428979 TPLSFTNPLHS(ph)DDS(ph)DS(ph)DERNSDGAVTQNK ddPTM_KYSE-520_SHP099_60min_R1 5 TPLSFTNPLHSDDSDSDERNSDGAVTQNK 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 3 T(0.001)PLS(0.005)FT(0.007)NPLHS(0.987)DDS(0.999)DS(0.97)DERNS(0.03)DGAVTQNK;TPLS(0.001)FT(0.001)NPLHS(0.998)DDS(1)DS(0.996)DERNS(0.004)DGAVTQNK;T(0.013)PLS(0.004)FT(0.004)NPLHS(0.98)DDS(0.999)DS(0.994)DERNS(0.006)DGAVTQNK;TPLSFTNPLHS(1)DDS(1)DS(0.995)DERNS(0.005)DGAVTQNK;T(0.001)PLS(0.001)FT(0.001)NPLHS(0.997)DDS(0.998)DS(0.985)DERNS(0.017)DGAVTQNK 138.69 1.5025e-05 1534390000.0 1491740.0 1359870.0 1342990.0 1484340.0 1337056.0 1410390.0 1340470.0 1347420.0 1728660.0 1443890.0 True False 1408990.2084900339 1294539.803993517 1429561.2842599754 1625411.2273169057 1442274.7003920106 1401587.2328523924 1475977.7893264885 1342746.1145101918 1414778.919972375 1431098.257929421 0.9845516900625858 0.9045778630647744 0.998926018069738 1.1357789154663815 1.007809696085271 0.9793787568998047 1.031360202661417 0.9382626993431875 0.9885966334829744 1.0 20.448691298943587 -4.922707150996652 8.281596591387014 1.0128139502944928 0.945538872972256 0.2108107607552624 0.0511080856535971 0.4029719906247533 38.1840871221311 0.014132129883870739 0.029590129165508842 1.1947934937944513e-05 4.922707150996652 -0.06727507732223681 TPLSFTNPLHS(ph)DDS(ph)DSDER ddPTM_KYSE-520_SHP099_60min_R1 8 TPLSFTNPLHSDDSDSDER 19 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 TPLSFTNPLHS(1)DDS(0.995)DS(0.005)DER;TPLSFTNPLHS(1)DDS(0.646)DS(0.354)DER;TPLSFTNPLHS(1)DDS(0.996)DS(0.004)DER;TPLSFTNPLHS(1)DDS(0.989)DS(0.011)DER;TPLSFTNPLHS(1)DDS(1)DSDER;TPLSFTNPLHS(1)DDS(0.995)DS(0.005)DER;TPLS(0.001)FT(0.001)NPLHS(0.998)DDS(0.993)DS(0.007)DER;TPLSFTNPLHS(1)DDS(0.896)DS(0.104)DER 242.05 2.4913e-26 2197683000.0 2066213.0 1897001.0 1714075.0 2065975.0 1978352.0 2004874.0 1933879.0 1978579.0 2164796.0 2005695.0 True False 1951596.0459965016 1805866.2245034464 1824567.017116966 2262324.6428419645 2134037.047116901 1992360.8376957509 2129374.3621602273 1971715.7712528096 1771723.6164662319 1987926.1027070996 0.9817246442606067 0.9084171801176465 0.9178243671293033 1.1380325655773607 1.0734991829982168 1.0022308349302382 1.0711536808438238 0.9918456066187695 0.8912421915752051 1.0 20.922832697834277 TPLSFTNPLHS(ph)DDS(ph)DSDERNSDGAVTQNK ddPTM_KYSE-520_SHP099_60min_R1 6 TPLSFTNPLHSDDSDSDERNSDGAVTQNK 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 T(0.007)PLS(0.046)FT(0.268)NPLHS(0.679)DDS(0.954)DS(0.029)DERNS(0.018)DGAVTQNK;TPLSFT(0.003)NPLHS(0.997)DDS(0.986)DS(0.014)DERNSDGAVTQNK;TPLSFTNPLHS(1)DDS(0.966)DS(0.034)DERNSDGAVTQNK;TPLS(0.015)FT(0.103)NPLHS(0.881)DDS(0.935)DS(0.063)DERNS(0.002)DGAVTQNK;TPLSFTNPLHS(1)DDS(0.999)DS(0.001)DERNSDGAVTQNK;TPLSFTNPLHS(1)DDS(1)DSDERNSDGAVTQNK 231.97 6.5720999999999995e-24 8625660000.0 3665790.0 3491820.0 3437710.0 3715530.0 3220630.0 3175450.0 2900650.0 2917170.0 4218490.0 3015950.0 True False 3462441.321128808 3324067.725871327 3659310.2871304774 4068652.854085173 3474075.258121965 3155630.838676628 3193876.0096159456 2907051.018142593 3452518.555478961 2989231.0293735946 1.1583050246385194 1.1120143251583665 1.224164425958505 1.361103512610658 1.1621969744004603 1.0556664264715274 1.0684607439944966 0.9725079759899914 1.1549855202066635 1.0 21.511342972546654 -6.179217888251257 3.945954536391095 1.049097902161071 1.2123145255473293 0.5190229801744972 0.07468979865221247 0.20435315153081596 5.987196005855651 0.02692045981726711 0.026654536729439404 6.618843488791394e-07 6.179217888251257 0.16321662338625842 TPLSFTNPLHS(ph)DDSDS(ph)DER ddPTM_KYSE-520_SHP099_60min_R1 1 TPLSFTNPLHSDDSDSDER 19 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 T(0.001)PLS(0.004)FT(0.099)NPLHS(0.897)DDS(0.151)DS(0.85)DER 109.62 5.3753999999999994e-05 366770000.0 472050.0 411290.0 370520.0 488840.0 436940.0 446220.0 492300.0 519200.0 472410.0 431390.0 True False 445864.445491655 391531.01104112377 394404.3120529614 535299.2066248942 471324.692151477 443434.9754630953 542066.4883849922 517399.0163821907 386632.25248698314 427568.220216341 1.0427913591568063 0.9157158846909081 0.9224359842586071 1.251962099414319 1.102337989275714 1.0371092950704475 1.2677894725447962 1.210096990184156 0.9042586286963865 1.0 18.705795100553843 -5.238523620685919 24.94544784198473 1.1224165570477935 0.9558545370416935 0.2685689013852569 0.11231576092669851 949.220803989715 1033293.6822580844 0.030142731613454456 0.0521622980438382 5.773994678885785e-06 5.238523620685919 -0.1665620200061 TPLSFTNPLHS(ph)DDSDS(ph)DERNSDGAVTQNK ddPTM_KYSE-520_SHP099_60min_R1 1 TPLSFTNPLHSDDSDSDERNSDGAVTQNK 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 TPLS(0.001)FT(0.004)NPLHS(0.977)DDS(0.493)DS(0.518)DERNS(0.007)DGAVTQNK 131.76 2.8431999999999998e-05 1882300000.0 895050.0 898500.0 859160.0 826540.0 774950.0 740780.0 724260.0 801110.0 968200.0 774980.0 True False 845399.7922620605 855334.7113240045 914542.8283046031 905094.1130916877 835934.1561376549 736156.5172416117 797475.2688964334 798331.1363904795 792399.2863358043 768114.2801253158 1.100617205195216 1.1135513730905497 1.1906338053699483 1.1783326212136351 1.0882939918800554 0.9583945205673169 1.038224766197977 1.0393390111953575 1.031616397245637 1.0 19.550961445675778 -6.013388037020215 5.619430175615727 1.0176285191762986 1.1457292392418923 0.7784282646064717 0.033312456286555193 0.08499721808618645 9.227527222174805 0.01156346204236885 0.012272160206908562 9.69643215259238e-07 6.013388037020215 0.1281007200655937 TPLSFTNPLHS(ph)DDSDSDERNS(ph)DGAVTQNK ddPTM_KYSE-520_SHP099_60min_R1 1 TPLSFTNPLHSDDSDSDERNSDGAVTQNK 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 2 TPLS(0.001)FT(0.003)NPLHS(0.996)DDS(0.347)DS(0.191)DERNS(0.461)DGAVT(0.001)QNK 119.7 0.00016782 991630000.0 1127200.0 1067300.0 1091100.0 972900.0 1007800.0 939120.0 978290.0 895130.0 1409600.0 912330.0 True False 1064671.9689825098 1016025.30595004 1161434.0518217264 1065364.123486949 1087108.1264023841 933258.6037311234 1077185.1003903183 892025.002954912 1153652.1731243029 904247.4659820001 1.1774121676153009 1.1236142142202752 1.2844205767946777 1.1781776157149397 1.202224133657704 1.0320831839076459 1.191250338999303 0.9864832764404657 1.2758146597308435 1.0 19.786358124386897 -6.232026872090083 24.045158392534738 1.1021642396755105 1.1935421615063562 0.22162990650266212 0.08974530920808772 695.872378300004 568885.3345858001 0.027559189403012066 0.027554127664153716 5.861018981764788e-07 6.232026872090083 0.0913779218308457 TPLSFTNPLHSDDS(ph)DSDER ddPTM_KYSE-520_SHP099_60min_R1 2 TPLSFTNPLHSDDSDSDER 19 0 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 TPLSFTNPLHS(0.03)DDS(0.967)DS(0.003)DER;TPLSFTNPLHS(0.309)DDS(0.686)DS(0.005)DER 141.36 1.8755e-06 183847000.0 137181.0 129395.0 123932.0 150623.0 119600.0 130917.0 107510.0 142855.0 144564.0 126496.0 True False 129571.29646645616 123178.66997414529 131920.85501821118 164938.16463354393 129011.83956908637 130099.8984418045 118378.15999648688 142359.4693476076 118314.821761877 125375.34385239873 1.033467127468039 0.9824792195119358 1.0522073237423646 1.3155550331149761 1.0290048713323474 1.0376832832057303 0.9441901123385994 1.1354662326206966 0.943684923418165 1.0 16.935894131991876 -5.968240083834352 24.999937180486754 1.0183006478638337 1.09564820983236 0.14572749051427503 0.0961343233350352 440.74870076512354 346935.0377154782 0.031089505416219996 0.03525193903831853 1.0758702936276636e-06 5.968240083834352 0.07734756196852643 TPLSFTNPLHSDDS(ph)DSDERNSDGAVTQNK ddPTM_KYSE-520_SHP099_60min_R1 1 TPLSFTNPLHSDDSDSDERNSDGAVTQNK 29 1 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 TPLSFTNPLHS(0.121)DDS(0.437)DS(0.437)DERNS(0.003)DGAVT(0.001)QNK 62.593999999999994 0.021401 411030000.0 277260.0 216660.0 176720.0 231200.0 204940.0 186010.0 243830.0 229400.0 236140.0 211340.0 True False 261879.83509589307 206251.32838671005 188111.65396199733 253173.17848718562 221067.61205090754 184849.042593094 268478.7159514779 228604.26494236247 193262.92860497508 209467.69202003223 1.2502158808855757 0.9846450610005547 0.898046148061857 1.2086502507650376 1.0553780868018823 0.8824704220993477 1.281718977100307 1.091358112259623 0.9226383636598839 1.0 17.676368216419352 -9.096660749808432 0.008201665884189087 2.071398182902657e-06 2.06349949596046 0.03820267239183395 0.13669370980489584 30870.5637843285 72.80631260126223 9446.895378915631 8869.99761656974 8.004592915746782e-10 9.096660749808432 2.0634974245622772 TPLSPS(ph)PMK ddPTM_KYSE-520_SHP099_60min_R1 5 TPLSPSPMK 9 0 Q69YQ0-2;Q69YQ0;F8WAN1;A0A494C1J1 Q69YQ0-2 SPECC1L;SPECC1L-ADORA2A Cytospin-A 1 TPLS(0.036)PS(0.964)PMK;TPLS(0.398)PS(0.602)PMK;TPLS(0.05)PS(0.95)PMK;TPLS(0.206)PS(0.794)PMK;T(0.001)PLS(0.185)PS(0.814)PMK 138.76 0.00043902 4967900000.0 8369830.0 8160990.0 6128400.0 5148480.0 5821440.0 8066130.0 5800100.0 7088300.0 8125900.0 8649900.0 True False 7905538.845057559 7768923.790504267 6523446.469786702 5637789.9912530435 6279554.208537315 8015786.290690998 6386430.711521005 7063712.341721649 6650441.397269286 8573268.615520364 0.9221149131786214 0.9061799109431875 0.7609054098663341 0.6576009972493848 0.732457419702132 0.9349743546096124 0.7449236688979416 0.8239229001799927 0.775718304828319 1.0 23.031413915594005 -9.029946576861102 11.71186720227337 0.9999999999728516 0.8040399501487427 0.3106179550692465 0.08639402926037776 0.0 0.0 0.08907218322229053 0.02160317763116901 9.333691087046505e-10 9.029946576861102 -0.19596004982410886 TPLYLQPDAYGS(ph)LDR ddPTM_KYSE-520_SHP099_60min_R1 10 TPLYLQPDAYGSLDR 15 0 Q8WUF5 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 TPLYLQPDAYGS(1)LDR;TPLYLQPDAYGS(1)LDR;TPLYLQPDAYGS(1)LDR;TPLYLQPDAYGS(1)LDR;TPLYLQPDAYGS(1)LDR;TPLYLQPDAYGS(1)LDR;TPLYLQPDAY(0.002)GS(0.998)LDR;TPLYLQPDAYGS(1)LDR;TPLYLQPDAYGS(1)LDR;TPLYLQPDAYGS(1)LDR 188.41 5.1443999999999994e-11 52347060000.0 10155900.0 9369760.0 9708680.0 9282250.0 8441940.0 8078580.0 7272690.0 7238970.0 8476430.0 7652760.0 True False 9592531.981715279 8919622.665303508 10334517.047237247 10164432.24918977 9106272.649931876 8028158.585622912 8007884.479814451 7213859.7026583 6937323.985411488 7584962.500157193 1.2646775750725834 1.1759613399695323 1.3625007436784389 1.3400767965535911 1.2005692381133268 1.0584308868312182 1.0557579526132783 0.951073878415193 0.9146154625375824 1.0 22.854710617170117 -6.383995501142731 1.5177182953587725 0.9647733874983004 1.2843733400530588 0.8594666598451645 0.056766749468345666 0.1501515458223127 0.6927685642303806 0.029079957613348337 0.023939740516423124 4.1305178077209124e-07 6.383995501142731 0.31959995255475837 TPMAGVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 TPMAGVSPK 9 0 A0A087WWD1;B7Z6K7;Q9H707 A0A087WWD1 ZNF814;ZNF552 Putative uncharacterized zinc finger protein 814;Zinc finger protein 552 1 TPMAGVS(1)PK 80.69 0.013058000000000002 0.0 595580.0 594660.0 574410.0 481220.0 466440.0 543680.0 485260.0 494380.0 633680.0 637680.0 True False 562541.9901407054 566091.640997143 611437.3876884949 526955.0041159308 503146.1743194372 540286.6914521435 534314.8164812131 492665.1111691593 518619.6857728497 632030.6513075333 0.8900549189773138 0.8956711827599233 0.9674173023469108 0.8337491275554058 0.7960787554820921 0.8548425465353752 0.8453938355297049 0.779495599066189 0.8205609723198376 1.0 19.26963500027129 -5.288458289515129 23.520342490581733 0.8360905331200941 0.9155101368505133 0.20978355181521402 0.06007577686926897 434.0845430399835 377875.6995467888 0.016009496502411798 0.023755538381464887 5.146852360089696e-06 5.288458289515129 0.07941960373041923 TPPGALLGAPPPLVPAPRPS(ph)SPPR ddPTM_KYSE-520_SHP099_60min_R1 2 TPPGALLGAPPPLVPAPRPSSPPR 24 1 J3KNZ9;Q9HAH7 J3KNZ9 FBRS Probable fibrosin-1 1 TPPGALLGAPPPLVPAPRPS(0.5)S(0.5)PPR;TPPGALLGAPPPLVPAPRPS(0.5)S(0.5)PPR 123.43 3.6654000000000005e-07 116019000.0 205812.0 204317.0 185642.0 169845.0 181334.0 228190.0 187800.0 201511.0 262650.0 223570.0 True False 194395.1980839495 194501.30463393047 197608.7803577022 185987.0177342387 195603.95415067463 226765.78156721758 206784.65675137436 200812.00537402075 214959.38086769148 221589.3437348278 0.8772768347406585 0.8777556779385876 0.8917792571928786 0.8393319579338897 0.8827317724481849 1.0233604998559152 0.9331886329282605 0.9062349388711086 0.9700799562136423 1.0 17.75752897806861 -6.104728442017569 8.296647708812669 0.9584775093305468 0.8719140468747324 0.6602102970925575 0.033106804254457556 0.2105072800598954 15.075899230774448 0.011050345707799336 0.011063546675674456 7.857267844967091e-07 6.104728442017569 -0.08656346245581437 TPPGALLGAPPPLVPAPRPSS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 TPPGALLGAPPPLVPAPRPSSPPR 24 1 J3KNZ9;Q9HAH7 J3KNZ9 FBRS Probable fibrosin-1 1 TPPGALLGAPPPLVPAPRPS(0.187)S(0.813)PPR;TPPGALLGAPPPLVPAPRPS(0.265)S(0.735)PPR 93.6 2.9156e-05 652430000.0 307060.0 356210.0 283620.0 209130.0 297630.0 351880.0 212870.0 298760.0 330080.0 309010.0 True False 290026.7696910659 339097.13691788906 301902.59900804475 229005.65232277254 321051.78771694953 349683.78639674105 234388.9770109962 297723.671291108 270145.7926396639 306272.41180614184 0.9469568871082036 1.1071749326626388 0.9857322676491573 0.7477188394876517 1.0482556552307507 1.1417410544247024 0.7652957562477257 0.9720877879120081 0.8820441614266432 1.0 18.22445589314315 -6.766376430728786 24.999997842171965 0.9025309628464896 0.9918918391258571 0.1292344792681691 0.11584085467302228 293.55350008920135 1486461.2163623692 0.04893979434180604 0.03417244788349402 1.7124723550303273e-07 6.766376430728786 0.08936087627936751 TPPGPCCS(ph)PGVGWAQR ddPTM_KYSE-520_SHP099_60min_R1 1 TPPGPCCSPGVGWAQR 16 0 H3BSW6;Q2VPK5-3;Q2VPK5-5;Q2VPK5 H3BSW6 CTU2 Cytoplasmic tRNA 2-thiolation protein 2 1 T(0.001)PPGPCCS(0.999)PGVGWAQR 106.19 0.00055098 655380000.0 312790.0 278350.0 294330.0 278390.0 292650.0 268620.0 236090.0 251540.0 367090.0 310780.0 True False 295438.9151685937 264977.64818813186 313302.98274465057 304848.1018989941 315679.89004927373 266943.44294047006 259956.28121635757 250667.46644987765 300435.70958584023 308026.7309831809 0.9591340148486186 0.8602423800764237 1.0171292009126238 0.9896806713039449 1.024845762709181 0.8666242766932 0.8439406553665366 0.8137847830601583 0.9753559654608185 1.0 18.2326960298488 -6.279202477008037 24.85012773794764 0.884802650487602 0.9677860215400012 0.19424954727387878 0.06806207496697575 1101.1537497132063 1540481.248354525 0.024189142540848464 0.021380644068464537 5.257720834956121e-07 6.279202477008037 0.08298337105239917 TPPSTTVGSHS(ph)PPETPVLTR ddPTM_KYSE-520_SHP099_60min_R1 2 TPPSTTVGSHSPPETPVLTR 20 0 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-2 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 TPPSTTVGSHS(1)PPETPVLTR;TPPSTTVGSHS(1)PPETPVLTR 207.17 1.2251000000000001e-14 2160460000.0 1134110.0 1589140.0 1346200.0 1495750.0 955970.0 1110830.0 875310.0 901590.0 1170420.0 1095670.0 True False 1071198.6575077644 1512795.3290522294 1432978.2059961583 1637905.6302863632 1031199.4002747452 1103896.8979285338 963794.8770023724 898462.594722687 957901.2318871632 1085963.216218362 0.9864041815688637 1.3930447242220783 1.319545804678544 1.5082514820253528 0.9495712054278226 1.0165140784165987 0.8875023229226722 0.8273416459273764 0.8820752098978567 1.0 20.050543806280352 -5.841831131680297 7.972078881768669 0.9188355955867638 1.30889449342932 0.6537083466467322 0.13353864994554035 0.15012417342435375 12.99276828919443 0.04176451744812328 0.04748947922235205 1.439358140376764e-06 5.841831131680297 0.3900588978425563 TPPT(ph)PPSSIVAK ddPTM_KYSE-520_SHP099_60min_R1 3 TPPTPPSSIVAK 12 0 Q96QT6-4;Q96QT6 Q96QT6-4 PHF12 PHD finger protein 12 1 T(0.158)PPT(0.842)PPSSIVAK;T(0.001)PPT(0.998)PPSSIVAK;T(0.001)PPT(0.998)PPS(0.001)SIVAK 133.98 0.0002218 994770000.0 3104260.0 4322240.0 2964020.0 2603300.0 2743390.0 4263530.0 2851240.0 4062120.0 4395660.0 4322100.0 True False 2932060.5096111093 4114593.1025854973 3155085.4717996833 2850716.8492893125 2959279.185246121 4236919.727793846 3139471.164620813 4048029.453825935 3597518.9495712044 4283809.55654292 0.6844516477472247 0.9604986048693579 0.7365139439919152 0.6654630210942131 0.6908054959460642 0.989054175231143 0.7328689856965537 0.9449601809779653 0.8397943237407689 1.0 22.03046291357241 -6.251075124054149 24.796415399736564 0.8873663879900924 0.7542040961359393 0.34069284139115563 0.10588034566457895 882.453407506732 2111265.328547457 0.035234512336770434 0.03485040059928909 5.60950934612166e-07 6.251075124054149 -0.13316229185415307 TPQASTYSYETSDLCYTAEKKS(ph)PSEAR ddPTM_KYSE-520_SHP099_60min_R1 1 TPQASTYSYETSDLCYTAEKKSPSEAR 27 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TPQASTYSYETSDLCYT(0.039)AEKKS(0.921)PS(0.04)EAR 186.78 1.8285e-15 1713100000.0 394950.0 570580.0 601000.0 395330.0 368460.0 337530.0 316720.0 249760.0 849350.0 267880.0 True False 373041.3361866943 543168.480341959 639741.4216339999 432902.044339701 397455.70574937784 335423.35006960353 348737.14848932484 248893.64085442206 695129.4503711177 265506.7916074865 1.405016172762097 2.045779985714849 2.40951057319756 1.630474466279131 1.4969700147518592 1.2633324670861097 1.3134773177662529 0.9374285280896898 2.6181230474840973 1.0 18.018389239771782 -5.495478819473815 7.175725374431442 1.4318727872818173 1.9733683617315807 0.1805489195829949 0.4902635435509161 0.32700942129564076 64.80704853086132 0.13685612606443184 0.1967162188012966 3.195370199097285e-06 5.495478819473815 0.5414955744497634 TPQEAIMDGTEIAVS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 TPQEAIMDGTEIAVSPR 17 0 Q06587 Q06587 RING1 E3 ubiquitin-protein ligase RING1 1 TPQEAIMDGTEIAVS(1)PR;TPQEAIMDGTEIAVS(1)PR;TPQEAIMDGTEIAVS(1)PR;TPQEAIMDGTEIAVS(1)PR 166.38 3.5311e-08 1500679000.0 462874.0 491919.0 412277.0 310653.0 310795.0 471605.0 353276.0 403237.0 501583.0 503590.0 True False 437197.45650355687 468286.4728545275 438853.0350865231 340177.3677187701 335252.7983183465 468661.53826200805 388988.58572150476 401838.26496322354 410508.17107846716 499128.584387092 0.8759214963423027 0.9382080840542578 0.8792384343714063 0.6815425490737883 0.6716762149176895 0.9389595245030975 0.7793354215510733 0.8050796478760344 0.8224497332336781 1.0 18.92905200174375 -5.018040089240933 24.208140775597997 0.80203695937272 0.9074794437200887 0.1331306425043296 0.09608924674242357 794.0346419046109 1065526.4533655888 0.02569119584944875 0.04571678782652582 9.593120743973201e-06 5.018040089240933 0.10544248434736869 TPQPPPPS(ph)PPMKLELK ddPTM_KYSE-520_SHP099_60min_R1 1 TPQPPPPSPPMKLELK 16 1 Q9BWN1 Q9BWN1 PRR14 Proline-rich protein 14 1 TPQPPPPS(1)PPMKLELK 78.975 0.0064716999999999995 423490000.0 304730.0 322040.0 237250.0 215780.0 220940.0 311860.0 246270.0 309800.0 323430.0 302680.0 True False 287826.0194358052 306568.7150081053 252543.51461342146 236287.66632337758 238326.72102336062 309913.56606140675 271165.37496358325 308725.37610786373 264703.2650068059 299998.49068147637 0.9594248917118877 1.0219008579399984 0.8418159506060974 0.7876295170239913 0.7944264002194737 1.033050417545126 0.9038891307339719 1.029089764440359 0.8823486558399215 1.0 18.19459571685188 -6.27028582756291 24.992639869380984 0.9673820456948403 0.8814966196503764 0.23401631944570067 0.08012435434514133 1138.8999045859844 3217567.7133494047 0.030329593755041316 0.027126896365571876 5.36678469318881e-07 6.27028582756291 -0.08588542604446392 TPQS(ph)PAPCVLLR ddPTM_KYSE-520_SHP099_60min_R1 3 TPQSPAPCVLLR 12 0 Q9Y613 Q9Y613 FHOD1 FH1/FH2 domain-containing protein 1 1 T(0.141)PQS(0.859)PAPCVLLR;T(0.014)PQS(0.986)PAPCVLLR;T(0.004)PQS(0.996)PAPCVLLR 115.1 0.00015622 2553780000.0 1198030.0 1413740.0 1049830.0 1088790.0 1102040.0 1559740.0 1122850.0 1664030.0 1888810.0 1874040.0 True False 1131572.8876864035 1345821.8083329962 1117503.721587391 1192268.2742433513 1188764.2782501336 1550005.0841038255 1236358.6359599617 1658257.8683175228 1545849.717025338 1857437.463581059 0.6092118361308273 0.7245583416511424 0.6016373328838175 0.6418887836711927 0.6400023158563022 0.8344857442013056 0.6656259821401017 0.8927664596149975 0.8322485937400049 1.0 20.824882208082528 -7.462446391164738 0.5328610720479493 1.0000193637154469 0.6330361617772218 0.7527329595051605 0.06480419609633781 0.38974851377801006 0.26111770876168694 0.06366581791646067 0.037087654651191876 3.4478916434333045e-08 7.462446391164738 -0.3669832019382251 TPRT(ph)PQLK ddPTM_KYSE-520_SHP099_60min_R1 1 TPRTPQLK 8 1 Q6PKG0;Q6PKG0-3;A0A0B4J210;E5RH50;H0YC33 Q6PKG0 LARP1 La-related protein 1 1 T(0.029)PRT(0.971)PQLK 82.505 0.022309 2251200000.0 2671900.0 3015700.0 2980400.0 1593000.0 1890600.0 2236600.0 1406800.0 1628600.0 3523600.0 2090600.0 True False 2523684.3806994027 2870821.245342015 3172521.3528086073 1744398.2410470867 2039379.4639574783 2222640.549775356 1549013.073044908 1622950.7667180994 2883803.0627275817 2072078.9104621871 1.2179480076540534 1.3854787242159925 1.5310813390311284 0.8418589814506583 0.9842190148552715 1.07266211655983 0.7475647115675692 0.7832475677077821 1.3917438414950787 1.0 20.98264751518875 -5.264231945873286 24.99880444221308 0.9604825831923087 1.3789002994821298 0.5001829266483531 0.184559325139943 192.8759153383581 1726613.043559588 0.05132017272827667 0.08009799376102862 5.442119251702121e-06 5.264231945873286 0.41841771628982105 TPS(ph)EADRWLEEVSK ddPTM_KYSE-520_SHP099_60min_R1 5 TPSEADRWLEEVSK 14 1 G3V3Z8;P49757-3;P49757;P49757-9;P49757-8;P49757-7;P49757-6;P49757-5;P49757-4;P49757-2 G3V3Z8 NUMB Protein numb homolog 1 T(0.001)PS(0.999)EADRWLEEVSK;T(0.002)PS(0.998)EADRWLEEVSK;T(0.019)PS(0.981)EADRWLEEVSK;T(0.001)PS(0.999)EADRWLEEVSK;T(0.009)PS(0.991)EADRWLEEVSK 284.57 7.8376e-33 1577640000.0 1228553.0 1162118.0 1082646.0 968121.0 972431.0 992777.0 872938.0 918621.0 1155660.0 998489.0 True False 1160402.7160303136 1106288.1069053193 1152435.0934548466 1060130.9287638084 1048955.7873244674 986580.7104910691 961183.0920938837 915434.5181587541 945821.2758178425 989643.164272687 1.1725465884292972 1.1178656578892832 1.1644955829122503 1.0712254346170567 1.0599333428381437 0.9969054969587259 0.9712420868387249 0.9250147439067387 0.9557195057401823 1.0 19.9165489007051 -5.926046010765279 0.9745411159058255 0.9528890161786162 1.1554466274398816 0.9063537623739197 0.025399504942948736 0.14238329066808697 0.2930414024431533 0.01230623996671086 0.015982352011103627 1.1856431300903086e-06 5.926046010765279 0.20255761126126537 TPS(ph)FELPDASERPPTYCELVPR ddPTM_KYSE-520_SHP099_60min_R1 6 TPSFELPDASERPPTYCELVPR 22 1 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 T(0.33)PS(0.67)FELPDASERPPTYCELVPR;T(0.206)PS(0.794)FELPDASERPPTYCELVPR;T(0.01)PS(0.99)FELPDASERPPTYCELVPR;T(0.162)PS(0.838)FELPDASERPPTYCELVPR;T(0.04)PS(0.96)FELPDASERPPTYCELVPR;T(0.036)PS(0.964)FELPDASERPPTYCELVPR 187.17 9.5675e-14 20441690000.0 1203635.0 1346895.0 1149152.0 1078794.0 1075033.0 1267273.0 1027877.0 1343905.0 1472710.0 1277106.0 True False 1136866.967163115 1282188.142469388 1223228.176628208 1181322.2574087558 1159631.980998943 1259363.47913595 1131784.8382728032 1339243.307224786 1205302.987997936 1265791.834413434 0.8981468644802386 1.012953400085372 0.9663738881638861 0.933267402500016 0.9161316651535478 0.9949214751567246 0.8941318844873657 1.058028082354781 0.9522126428920058 1.0 20.271608735423317 -7.261807037520921 24.999996383057248 1.0038402678083798 0.9489010615782902 0.2697840776694843 0.04363056058022454 46.61400809812514 3169325.7546172896 0.02095914737814328 0.011087658679300174 5.4725906294141025e-08 7.261807037520921 -0.05493920623008952 TPS(ph)FHIK ddPTM_KYSE-520_SHP099_60min_R1 1 TPSFHIK 7 0 O60890 O60890 OPHN1 Oligophrenin-1 1 T(0.038)PS(0.962)FHIK 74.464 0.043279000000000005 0.0 466790.0 460860.0 487880.0 561960.0 551030.0 494570.0 449630.0 489760.0 535210.0 511060.0 True False 440896.22817720444 438719.5938350368 519329.52543559956 615368.5094405647 594392.9260681748 491483.20517857384 495082.98836592375 488061.1368708439 438029.3555461535 506532.405998663 0.870420575181064 0.8661234476599209 1.0252641672781155 1.2148650355890338 1.173454884680653 0.9702897570977347 0.9773964755321707 0.9635338846852222 0.8647607741553058 1.0 18.95029504450573 -9.995674200817566 12.31739006884326 0.9999999999973472 0.9990957252382504 0.0 0.11510533645335941 0.0 0.0 0.12510355337140755 0.03034206828513455 1.0100102918106214e-10 9.995674200817566 -0.0009042747590968236 TPS(ph)FLK ddPTM_KYSE-520_SHP099_60min_R1 6 TPSFLK 6 0 P35612;P35611;P35611-3;Q9UEY8-2;Q9UEY8 P35612;P35611;Q9UEY8-2 ADD2;ADD1;ADD3 Beta-adducin;Alpha-adducin;Gamma-adducin 1 T(0.039)PS(0.961)FLK;T(0.039)PS(0.961)FLK;T(0.201)PS(0.799)FLK;T(0.24)PS(0.76)FLK;T(0.369)PS(0.631)FLK;T(0.091)PS(0.909)FLK 93.374 0.01436 17574310000.0 12659200.0 10792810.0 10529940.0 12123600.0 12140900.0 11385110.0 11984000.0 13263600.0 12597300.0 12339500.0 True False 11956968.940510444 10274307.207261913 11208716.7808997 13275823.298906738 13096319.757728416 11314051.305397876 13195459.672569053 13217591.6673475 10309947.8720905 12230181.62998574 0.9776607823382248 0.8400780559195907 0.9164799935119826 1.085496822578441 1.0708197272899933 0.9250926640090354 1.0789258959340933 1.0807355170376902 0.8429922125451313 1.0 23.543942493647886 -5.131943816727856 7.034411297602132 1.016777198053689 0.9016978487404933 0.2467560896275448 0.0800550068687934 0.3165567169143297 16.62563364352819 0.021334880643615616 0.03728443917283927 7.379996965871302e-06 5.131943816727856 -0.11507934931319574 TPS(ph)FLKK ddPTM_KYSE-520_SHP099_60min_R1 2 TPSFLKK 7 1 P35612;P35611;P35611-3;Q9UEY8-2;Q9UEY8 P35612;P35611;Q9UEY8-2 ADD2;ADD1;ADD3 Beta-adducin;Alpha-adducin;Gamma-adducin 1 T(0.114)PS(0.886)FLKK;T(0.257)PS(0.743)FLKK 89.08 0.016451 23416800000.0 18943200.0 17271700.0 17167800.0 17006600.0 16496800.0 15700300.0 17966500.0 17907200.0 18669400.0 15956700.0 True False 17892382.933667008 16441941.606649768 18274463.85745121 18622902.150779255 17795004.306047704 15602308.603969429 19782729.156142518 17845084.102771915 15279507.57727503 15815336.052124763 1.1313311885815538 1.0396201226745871 1.1554900760389515 1.1775217478402744 1.1251739607301596 0.9865303242717556 1.2508573381521502 1.128340494565366 0.9661196908441446 1.0 23.914820875494158 -7.758320912165338 24.95285096982422 0.9830598039185131 1.1239929898406977 0.406619766828357 0.06827503994337722 73.48374104651315 588030.2890697282 0.05100615069962162 0.01742241269799134 1.7445325933070176e-08 7.758320912165338 0.14093318592218462 TPS(ph)PAAEDAREPEAK ddPTM_KYSE-520_SHP099_60min_R1 1 TPSPAAEDAREPEAK 15 1 Q92797 Q92797 SYMPK Symplekin 1 T(0.311)PS(0.689)PAAEDAREPEAK 188.44 4.717300000000001e-09 0.0 288870.0 278040.0 217670.0 192080.0 242680.0 188890.0 205760.0 196750.0 246060.0 213040.0 True False 272845.8052519314 264682.5410534513 231701.3564843141 210335.2254490424 261777.53533968134 187711.06744481192 226560.22882408314 196067.52017179504 201381.70666782497 211152.63134261183 1.2921733606493284 1.2535128706209822 1.0973169266754736 0.996128838706049 1.2397550230616194 0.8889828473898386 1.0729690053280523 0.9285582610318505 0.953725773566455 1.0 17.68792670027024 -3.040292037669841 0.36541910251537135 0.9581655086860124 2.090478060583554 0.5964120918455699 0.08738490925490068 9.895969053894822 0.5239890875818782 0.07168865302717022 5.891023506771782 0.0009113977714906671 3.040292037669841 1.1323125518975414 TPS(ph)PAPK ddPTM_KYSE-520_SHP099_60min_R1 4 TPSPAPK 7 0 Q63ZY6;Q96P11-2;Q3KNT7-3;Q63ZY6-6 Q63ZY6 NSUN5P2;NSUN5 Putative methyltransferase NSUN5C;Probable 28S rRNA (cytosine-C(5))-methyltransferase 1 T(0.217)PS(0.783)PAPK;T(0.402)PS(0.598)PAPK;T(0.322)PS(0.678)PAPK;T(0.033)PS(0.967)PAPK 99.13600000000001 0.005407899999999999 18003500000.0 40864300.0 37847400.0 31423400.0 27046100.0 28244600.0 37123700.0 31426600.0 33658100.0 38337000.0 37910300.0 True False 38597475.81803757 36029154.093894444 33449002.643217668 29616553.212293494 30467289.330209143 36891997.21796266 34603507.42205934 33541347.906959567 31375967.197124306 37574444.2357671 1.0272267921210303 0.9588739055679314 0.89020618464338 0.7882100138716492 0.8108513632041254 0.9818374687454507 0.9209319825180615 0.8926638461103724 0.8350347645929393 1.0 25.163248429584517 -4.546063552586967 2.727944149970305 0.8840144116880096 1.0237542954034098 0.31362626865768295 0.06443125023598299 0.3540837687915232 4.857273074239607 0.01777950021342707 0.08290725710827285 2.84404489300504e-05 4.546063552586967 0.13973988371540014 TPS(ph)PARPALR ddPTM_KYSE-520_SHP099_60min_R1 2 TPSPARPALR 10 1 Q9H211 Q9H211 CDT1 DNA replication factor Cdt1 1 T(0.19)PS(0.81)PARPALR;T(0.205)PS(0.795)PARPALR 122.42 0.00031748 1672580000.0 1217520.0 1106940.0 1000750.0 877750.0 906990.0 955240.0 903680.0 887090.0 1026760.0 908190.0 True False 1149981.7385340536 1053760.9408491848 1065259.9462566131 961171.0960948408 978364.9529328241 949277.9928317126 995032.7934668899 884012.8918383619 840326.2665132729 900144.1431611289 1.2775528755822865 1.1706579983385594 1.183432625041174 1.0677968671988436 1.0868980933398058 1.05458442411016 1.1054149505128488 0.9820792575885489 0.9335463357704163 1.0 19.77979651807091 -2.026114141545388 0.24851797841663748 0.9625758401692633 2.1894270751493754 0.8333577394863714 0.04009816328197681 12.141255485895426 0.25713089564115876 0.05547256041127567 5.600604929450011 0.009416420810417733 2.026114141545388 1.2268512349801122 TPS(ph)PEPVDKDFYSEFGNK ddPTM_KYSE-520_SHP099_60min_R1 1 TPSPEPVDKDFYSEFGNK 18 1 Q9Y2I1-2;Q9Y2I1 Q9Y2I1-2 NISCH Nischarin 1 T(0.007)PS(0.993)PEPVDKDFYSEFGNK 103.26 0.00033731 794220000.0 210170.0 196800.0 161190.0 163000.0 157570.0 174990.0 171440.0 195130.0 210840.0 173940.0 True False 198511.4511364921 187345.43259717745 171580.56531311877 178491.47099226294 169969.86254933884 173897.82250075534 188770.8282931611 194453.13957368422 172556.7708438764 172399.02692327247 1.151465032484442 1.0866965779369335 0.9952525160683305 1.0353392021852998 0.9859096398785664 1.0086937589163418 1.0949645810772182 1.1279248093449339 1.0009149931030303 1.0 17.39539210584218 -4.4663815582662965 3.646701933306905 1.035686661112507 1.146778309342071 0.41864095128978873 0.04423289300305991 0.2607414163439937 6.535397098995752 0.012249158010839797 0.05676486796166563 3.416791214521988e-05 4.4663815582662965 0.11109164822956386 TPS(ph)PNSNEQQK ddPTM_KYSE-520_SHP099_60min_R1 5 TPSPNSNEQQK 11 0 Q9H4E7 Q9H4E7 DEF6 Differentially expressed in FDCP 6 homolog 1 TPS(1)PNSNEQQK;TPS(0.999)PNS(0.001)NEQQK;TPS(1)PNSNEQQK;TPS(1)PNSNEQQK;TPS(1)PNSNEQQK 244.26 2.3774000000000002e-14 2928720000.0 3773840.0 3994790.0 3211410.0 2756160.0 2860030.0 3924980.0 3071420.0 3609260.0 4221470.0 3724150.0 True False 3564497.572236473 3802874.2920979606 3418422.6270376737 3018104.6177302813 3085098.089655305 3900482.74392259 3381909.107770531 3596740.3194676163 3454957.4625986507 3691156.928344856 0.9656857298220648 1.0302662189448553 0.9261114315642281 0.8176581695982303 0.835807891548704 1.0567100829472447 0.9162192703865901 0.9744208629678671 0.9360093677046348 1.0 21.815641643925353 -6.258554214402497 24.99165242992809 0.9712949276009076 0.916701346315387 0.17429481397479474 0.06644261225913342 606.496456758706 5253567.178834887 0.024837351171251677 0.02376167368080513 5.513733683421176e-07 6.258554214402497 -0.05459358128552061 TPS(ph)PPPPIPEDIALGK ddPTM_KYSE-520_SHP099_60min_R1 3 TPSPPPPIPEDIALGK 16 0 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 T(0.051)PS(0.949)PPPPIPEDIALGK;T(0.02)PS(0.98)PPPPIPEDIALGK;T(0.012)PS(0.988)PPPPIPEDIALGK 143.38 1.3909e-05 400240000.0 426648.0 450280.0 348259.0 311415.0 368534.0 505470.0 386981.0 478760.0 504910.0 500710.0 True False 402980.984938298 428647.8729159405 370708.33237410174 341011.78796966653 397535.5291283752 502315.17423542315 426100.816050605 477099.29330342455 413231.0717453117 496274.09894648497 0.8120129295358469 0.8637321065634802 0.7469830344985958 0.6871440373245009 0.8010402516921257 1.012172860324088 0.8585997475087914 0.9613624694825589 0.8326670132947477 1.0 18.920777635304844 -6.116312712304843 6.826570998126403 0.9253840590098145 0.7770587575709874 0.5572738073768194 0.06725440290385211 0.20260568753492691 10.703796119861881 0.0223882140060789 0.02243934908835459 7.65045540028157e-07 6.116312712304843 -0.14832530143882705 TPS(ph)PSQPK ddPTM_KYSE-520_SHP099_60min_R1 1 TPSPSQPK 8 0 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 T(0.267)PS(0.733)PSQPK 97.565 0.0031353 519870000.0 1003700.0 1003300.0 851870.0 643350.0 684290.0 1030400.0 683470.0 871410.0 978040.0 973230.0 True False 948022.760173655 955099.9620159983 906782.9032401906 704493.7905697686 738139.7299224922 1023968.8913925266 752561.8176243965 868387.2820986232 800452.5903820177 964607.9393614816 0.9828063003516174 0.9901431690975123 0.9400533276145664 0.7303421025500842 0.7652225321834909 1.0615389419978636 0.7801737751843012 0.900248947436042 0.829821689951955 1.0 19.879583158920095 -5.012257291930896 23.303590953151286 0.8607547489743799 0.98113070242592 0.20142068490410237 0.09743272872571307 351.1261155533755 667572.5797921108 0.025846989179281896 0.048071283809273085 9.721711034276886e-06 5.012257291930896 0.12037595345154017 TPS(ph)PSQPKK ddPTM_KYSE-520_SHP099_60min_R1 4 TPSPSQPKK 9 1 Q9NTI5-2;Q9NTI5 Q9NTI5-2 PDS5B Sister chromatid cohesion protein PDS5 homolog B 1 T(0.117)PS(0.879)PS(0.004)QPKK;T(0.018)PS(0.972)PS(0.01)QPKK;T(0.018)PS(0.982)PS(0.001)QPKK;T(0.018)PS(0.98)PS(0.002)QPKK 109.11 0.0010811 4198380000.0 4250320.0 4617050.0 4362740.0 3273490.0 3467360.0 3833610.0 3174770.0 3098520.0 5067380.0 3242120.0 True False 4014546.2767971396 4395239.987666663 4643969.201030809 3584601.5053893444 3740221.505420292 3809683.017984576 3495706.7343693296 3087771.9573200014 4147271.530254422 3213397.339131191 1.249315242752568 1.3677860294908342 1.4451898445544875 1.1155176677772802 1.1639461637294872 1.1855623864475482 1.0878538709795742 0.9609057428779862 1.2906189594890634 1.0 21.61566795155022 -5.275430616536715 24.088601719180815 1.1171450835435586 1.3554659315392061 0.5572265685649193 0.09768772939341165 339.6320437354173 584741.337577718 0.027060160670501886 0.040390552498749496 5.303583166103418e-06 5.275430616536715 0.23832084799564757 TPS(ph)QIIR ddPTM_KYSE-520_SHP099_60min_R1 2 TPSQIIR 7 0 Q01804-5;Q01804-3;Q01804;D6RI06 Q01804-5 OTUD4 OTU domain-containing protein 4 1 T(0.074)PS(0.926)QIIR;T(0.089)PS(0.911)QIIR 70.929 0.027110000000000002 1519950000.0 580460.0 579990.0 549400.0 489530.0 497350.0 460070.0 472720.0 604030.0 571850.0 659160.0 True False 548260.7266816775 552126.4098172621 584815.2030710799 536054.7840174385 536488.6154655945 457198.5324756983 520507.150902608 601934.7609116622 468016.4551653897 653320.3552187195 0.8391912517376411 0.8451082312174714 0.8951430923582577 0.8205083153087698 0.8211723562263541 0.699807573457032 0.7967104449521581 0.9213470177431495 0.7163659473134073 1.0 19.317431064299274 -10.447894754970749 3.09995162367765 1.0034991349990414 0.8195841093281726 0.4131092251074122 0.06528993796019456 26439890.339092325 32173530.949953593 804636.6465925532 0.016380120289092807 3.565375247055955e-11 10.447894754970749 -0.18391502567086881 TPS(ph)SDVLVFDYTK ddPTM_KYSE-520_SHP099_60min_R1 6 TPSSDVLVFDYTK 13 0 E9PC52;Q16576;Q16576-2;Q5JP01;Q09028-4;Q09028-3;Q09028-2;Q09028;H0YF10 E9PC52;Q09028-4 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 1 T(0.069)PS(0.93)S(0.001)DVLVFDYTK;T(0.347)PS(0.652)S(0.001)DVLVFDYTK;T(0.106)PS(0.893)SDVLVFDYTK;T(0.233)PS(0.764)S(0.003)DVLVFDYTK;T(0.045)PS(0.922)S(0.033)DVLVFDYTK;TPS(0.999)S(0.001)DVLVFDYTK 260.97 1.1508e-17 1044230000.0 2012150.0 2061620.0 1608603.0 1536088.0 1553011.0 2020716.0 1622847.0 1834530.0 2178190.0 2011580.0 True False 1900532.0283784205 1962576.6806452894 1712296.1232357998 1682077.3416783041 1675224.1302761408 2008103.9618974575 1786900.2122204322 1828166.4436125206 1782685.603701496 1993758.9661855563 0.9532406176532479 0.9843600525092937 0.8588280490654049 0.8436713615871236 0.8402340296335651 1.0071949498185058 0.8962468595886068 0.9169445628175176 0.8941329588661943 1.0 20.927059576197845 -6.245494535652932 24.972079485674314 0.9347968477824158 0.8959923301758992 0.1415570782406428 0.05591526985537965 2190.734040227939 3431027.9122354547 0.019868317554160006 0.01981625784831868 5.682055407475587e-07 6.245494535652932 -0.0388045176065166 TPS(ph)SEEIS(ph)PTKFPGLYR ddPTM_KYSE-520_SHP099_60min_R1 5 TPSSEEISPTKFPGLYR 17 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 2 T(0.002)PS(0.998)S(0.001)EEIS(1)PTKFPGLYR;T(0.327)PS(0.673)SEEIS(0.999)PT(0.001)KFPGLYR;T(0.064)PS(0.936)SEEIS(0.996)PT(0.004)KFPGLYR;T(0.017)PS(0.982)SEEIS(0.991)PT(0.009)KFPGLYR;T(0.048)PS(0.937)S(0.129)EEIS(0.857)PT(0.03)KFPGLYR 252.55 4.752e-24 6489460000.0 14371650.0 13093590.0 12244300.0 12546420.0 13186610.0 13655080.0 12279140.0 13007150.0 16617980.0 13265890.0 True False 13574425.925326018 12464554.28252072 13033587.16957267 13738827.984581275 14224321.185452422 13569853.580625262 13520435.304057887 12962031.23254164 13600573.737185156 13148364.535306256 1.0324041358053082 0.9479927521822692 0.9912705975389271 1.0449077486169094 1.0818319759280315 1.0320563857343028 1.0282978744430562 0.9858284045696885 1.0343928098939315 1.0 23.64838002467669 -5.1931903878959425 6.575284740604606 1.031204785286371 0.9857531823859315 0.24924482042903162 0.030698619039146925 0.31890660469993476 25.305240600335495 0.008650074537853662 0.015086133123539016 6.409285419589351e-06 5.1931903878959425 -0.04545160290043959 TPS(ph)SEEISPTK ddPTM_KYSE-520_SHP099_60min_R1 6 TPSSEEISPTK 11 0 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 T(0.007)PS(0.992)S(0.001)EEISPTK;T(0.313)PS(0.686)SEEISPTK;T(0.001)PS(0.999)S(0.001)EEISPTK;T(0.085)PS(0.915)SEEISPTK;T(0.004)PS(0.994)S(0.002)EEISPTK;T(0.006)PS(0.993)S(0.002)EEISPTK 260.57 2.4693000000000003e-20 2766410000.0 5229320.0 4985640.0 3973000.0 4091390.0 4208650.0 5260530.0 4499180.0 5534950.0 5709660.0 5218900.0 True False 4939239.195209023 4746122.3708017925 4229105.937024763 4480234.4754787395 4539846.811057154 5227697.080975478 4954001.022165324 5515750.550317037 4672929.672815625 5172664.606242765 0.9548732754193986 0.9175391663851182 0.8175875025650718 0.8661366658243513 0.8776611585406334 1.0106390958861504 0.9577270902479272 1.0663267329685768 0.9033892642441921 1.0 22.302476220058384 -6.256507000022393 24.862134950678573 0.9898937746133374 0.8834809199552696 0.4953582056045792 0.05081898910557252 322.20363268111595 1624099.9104544895 0.0169960559998087 0.01648410230711155 5.539786147577682e-07 6.256507000022393 -0.10641285465806782 TPS(ph)SEEISPTKFPGLYR ddPTM_KYSE-520_SHP099_60min_R1 4 TPSSEEISPTKFPGLYR 17 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 T(0.017)PS(0.938)S(0.045)EEISPTKFPGLYR;T(0.006)PS(0.982)S(0.012)EEISPTKFPGLYR;T(0.004)PS(0.924)S(0.073)EEISPTKFPGLYR;T(0.008)PS(0.99)S(0.002)EEISPTKFPGLYR 175.59 1.0435e-08 2385910000.0 3612850.0 3315890.0 3052002.0 2816282.0 2880982.0 2846071.0 2600020.0 2878350.0 4078500.0 2841645.0 True False 3412438.008462078 3156589.667147642 3248738.9322958584 3083940.594533942 3107698.8928547287 2828307.6151925684 2862855.395349881 2868365.6756619425 3337947.2106182394 2816470.236066359 1.2116009481527776 1.12076088244281 1.1534788795898052 1.0949665134189905 1.103402000510794 1.004202912913698 1.0164692524314782 1.0184257014084634 1.1851526665803522 1.0 21.425456794849318 -5.364358143865952 1.0389467040090372 1.0463723797605013 1.1779553971418686 0.4494990773289613 0.05502730884037752 0.5714000227303715 1.1976261108366955 0.02180566944558288 0.05516746876469978 4.321573026217554e-06 5.364358143865952 0.13158301738136724 TPS(ph)SNTLDDYMSCFR ddPTM_KYSE-520_SHP099_60min_R1 1 TPSSNTLDDYMSCFR 15 0 P33981-2;P33981 P33981-2 TTK Dual specificity protein kinase TTK 1 TPS(0.997)S(0.003)NTLDDYMSCFR 187.75 4.275e-09 0.0 164520.0 87954.0 53556.0 33555.0 44656.0 87697.0 66732.0 69037.0 77160.0 73770.0 True False 155393.7476375109 83728.55781835447 57008.30545262974 36744.05711132139 48170.17314211638 87149.65049344953 73477.92180155855 68797.52676035698 63149.68904531157 73116.45519219147 2.1252910473989486 1.145139730834439 0.7796918669371979 0.5025415553138782 0.6588143943179121 1.191929371635576 1.0049437108024035 0.9409308284915906 0.8636864147655737 1.0 16.157908507376863 -4.285184579658426 2.7834732184511792 0.8635263010208455 2.32312279525243 0.8088921501377402 0.18309337294473804 0.18202099321555956 2.013444912429778 0.053141514436689824 0.5910705596165533 5.185795903822571e-05 4.285184579658426 1.4595964942315844 up TPS(ph)SPSKSPASFEIPASAMEANGVDGDGLNKPAKK ddPTM_KYSE-520_SHP099_60min_R1 2 TPSSPSKSPASFEIPASAMEANGVDGDGLNKPAKK 35 3 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3;H0Y911;Q4VXL4;O95359-2;H0YA73 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 1 T(0.107)PS(0.444)S(0.444)PS(0.003)KS(0.001)PASFEIPASAMEANGVDGDGLNKPAKK;T(0.097)PS(0.45)S(0.45)PS(0.002)KSPASFEIPASAMEANGVDGDGLNKPAKK 168.27 2.0419999999999998e-10 1857430000.0 665750.0 596410.0 540150.0 402260.0 430930.0 468380.0 435880.0 547050.0 724190.0 535800.0 True False 628819.5203602784 567757.5683703388 574968.9332705571 440490.66945612116 464841.7393436988 465456.666683261 479943.0041788552 545152.4112324303 592695.3513442742 531053.2288460918 1.184098855262814 1.0691161215684548 1.082695485196255 0.82946613546301 0.8753204275845158 0.8764783667630391 0.9037568705150474 1.026549471165017 1.1160752240074363 1.0 19.018496947789366 -1.6862727190725821 9.747917103771286 0.9876130753834977 1.1882604713999456 0.0 0.11378266794464555 0.0 0.0 0.028546398444953176 0.0 0.020593363286373838 1.6862727190725821 0.20064739601644788 TPS(ph)SQNLLALLAR ddPTM_KYSE-520_SHP099_60min_R1 4 TPSSQNLLALLAR 13 0 O75385 O75385 ULK1 Serine/threonine-protein kinase ULK1 1 T(0.077)PS(0.91)S(0.013)QNLLALLAR;T(0.003)PS(0.945)S(0.052)QNLLALLAR;T(0.033)PS(0.95)S(0.017)QNLLALLAR;T(0.311)PS(0.687)S(0.002)QNLLALLAR 160.79 1.0998e-06 1328335000.0 547410.0 592188.0 463577.0 416291.0 440283.0 593391.0 435731.0 495716.0 665568.0 529439.0 True False 517044.0760652196 563738.3995876894 493459.9151694258 455855.1714775465 474930.7672324083 589687.4266617851 479778.94180475554 493996.4768969847 544717.6288039136 524748.5823573093 0.9853177187111606 1.0743019010270167 0.9403739843425083 0.8687115826587365 0.9050634593406499 1.12375230060223 0.9143025020657736 0.9413964963522569 1.0380545028952686 1.0 19.00126683842429 TPS(ph)TPVACSTPAQLK ddPTM_KYSE-520_SHP099_60min_R1 1 TPSTPVACSTPAQLK 15 0 Q6PL18;A0A0B4J211 Q6PL18 ATAD2 ATPase family AAA domain-containing protein 2 1 T(0.061)PS(0.469)T(0.469)PVACSTPAQLK 68.03399999999999 0.024236 1157200000.0 674860.0 765160.0 663220.0 486970.0 513300.0 849130.0 637890.0 829920.0 828610.0 842250.0 True False 637424.1704999438 728400.5650714249 705972.2223895187 533251.4823871313 553693.789722508 843830.2647012194 702374.1464064651 827041.2012247847 678155.3115582647 834788.3202605835 0.7635758132085131 0.8725572068905455 0.8456901052103195 0.6387864677127659 0.6632744808284687 1.010831421836153 0.8413799395123489 0.9907196604842524 0.8123679920995719 1.0 19.671050889956106 -6.264075513088235 24.99446945097855 0.9248747887911997 0.7615936673090553 0.4824407717835659 0.09007463105518244 237.28301553164883 2249786.650716966 0.03231461722609998 0.029785150065325887 5.444079855045517e-07 6.264075513088235 -0.16328112148214435 TPSKQPGSIGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 TPSKQPGSIGSR 12 1 Q66K14;Q66K14-2 Q66K14 TBC1D9B TBC1 domain family member 9B 1 T(0.026)PS(0.004)KQPGS(0.043)IGS(0.927)R 67.32600000000001 0.018179 711070000.0 558950.0 514270.0 543080.0 557230.0 469320.0 544060.0 416130.0 520770.0 659650.0 405330.0 True False 527943.929260799 489563.6972649923 578087.8057587227 610188.9716626916 506252.8139344789 540664.31973119 458196.4814374308 518963.57041863125 539874.1884232742 401739.0915419682 1.3141462714878633 1.2186110527256204 1.4389632921702666 1.5188687994505192 1.260153230275308 1.3458095841656692 1.1405324776306083 1.2917925622491158 1.343842806910105 1.0 18.615899325239567 -6.698832569658979 10.491336660412149 1.2184416422801458 1.3513753105054784 0.28701500131224855 0.11746486620394976 0.7173716447488199 116.23707983818186 0.04579832485516764 0.03543197639874746 2.0006330102315806e-07 6.698832569658979 0.1329336682253326 TPSNTPSAEADWS(ph)PGLELHPDYK ddPTM_KYSE-520_SHP099_60min_R1 9 TPSNTPSAEADWSPGLELHPDYK 23 0 Q9Y3Z3-3;Q9Y3Z3-4;Q9Y3Z3;A0A2R8Y7R5;A0A2R8Y755;A0A2R8Y586;A0A2R8YF51;A0A2R8Y5D2;A0A2R8YCS7 Q9Y3Z3-3 SAMHD1 Deoxynucleoside triphosphate triphosphohydrolase SAMHD1 1 TPSNTPSAEADWS(0.999)PGLELHPDYK;T(0.002)PS(0.007)NT(0.005)PS(0.015)AEADWS(0.971)PGLELHPDYK;TPSNTPSAEADWS(1)PGLELHPDYK;TPSNTPSAEADWS(1)PGLELHPDYK;TPSNTPSAEADWS(1)PGLELHPDYK;TPSNTPSAEADWS(1)PGLELHPDYK;TPSNTPSAEADWS(1)PGLELHPDYK;TPSNTPSAEADWS(1)PGLELHPDYK;TPSNTPSAEADWS(1)PGLELHPDYK 229.96 6.568400000000001e-22 36575470000.0 17907600.0 17193300.0 13627460.0 12815870.0 13150490.0 16047140.0 12366170.0 14851840.0 18105910.0 14090260.0 True False 16914229.73008443 16367308.060330553 14505907.876306921 14033886.431568185 14185358.746947093 15946983.846875675 13616263.145788837 14800322.43348551 14818333.156848066 13965431.258456402 1.2111498325440155 1.1719872990259257 1.0387010331330262 1.004901758624198 1.015747991194867 1.1418898243632396 0.9749976849117256 1.0597826991217019 1.0610723637965145 1.0 23.735356789553695 -4.706768780596848 4.061543555233619 1.038353163235767 1.2015056333586107 0.6703986663404791 0.04361868589154254 0.11870062743232519 3.930459572152657 0.011224434899322355 0.031748657622841917 1.964405852771961e-05 4.706768780596848 0.16315247012284373 TPSPKEEDEEPES(ph)PPEK ddPTM_KYSE-520_SHP099_60min_R1 1 TPSPKEEDEEPESPPEK 17 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TPSPKEEDEEPES(1)PPEK 120.75 6.5431e-05 510870000.0 408350.0 393230.0 362190.0 308060.0 321300.0 341180.0 293810.0 322950.0 425410.0 320830.0 True False 385698.01147445693 374338.6405497365 385537.34692449006 337337.92977838335 346584.4820530726 339050.5690657048 323511.1821092723 321829.7618270967 348166.26771340123 317987.6958019631 1.2129337599108319 1.1772110854970557 1.2124285059274609 1.0608521468971277 1.089930480419969 1.0662380134257121 1.0173701258892391 1.012082436131511 1.0949048416333467 1.0 18.27861141746557 -5.289402370767072 6.085246404774631 1.049868639327328 1.1987645453788682 0.8316779661328944 0.031352462012552665 0.07103731244398324 9.141246091430078 0.009053595298215908 0.013949888797968813 5.1356761433009e-06 5.289402370767072 0.14889590605154024 TPSPKEEDEEPES(ph)PPEKK ddPTM_KYSE-520_SHP099_60min_R1 13 TPSPKEEDEEPESPPEKK 18 2 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK;TPSPKEEDEEPES(1)PPEKK 178.11 5.0378e-09 123188600000.0 16480090.0 14440370.0 15158770.0 12659020.0 13860320.0 14163830.0 12832150.0 13439040.0 18996710.0 13054190.0 True False 15565906.555455064 13746632.949762732 16135928.569089573 13862129.454726847 14951048.329566887 14075428.283164034 14129348.951715391 13392423.106935507 15547386.332088647 12938540.032606145 1.203065146162376 1.0624562674861404 1.2471212770858038 1.071382815974073 1.1555436928655831 1.087868356684204 1.0920358028114696 1.035079929666372 1.2016337463815858 1.0 23.62517149896469 -7.338583822280672 0.015700256096355933 1.5202470916833914e-05 2.1928146767666323 0.26520471410170665 0.06634094063442883 531.0083235801314 8.363231963889016 580.9956662207621 584.7657349197777 4.585811274601524e-08 7.338583822280672 2.1927994742957155 TPSS(ph)PCPASK ddPTM_KYSE-520_SHP099_60min_R1 6 TPSSPCPASK 10 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 TPS(0.025)S(0.975)PCPASK;TPS(0.01)S(0.99)PCPASK;TPS(0.002)S(0.998)PCPASK;TPS(0.243)S(0.756)PCPASK;TPS(0.004)S(0.996)PCPASK;TPS(0.028)S(0.971)PCPASK 209.95 5.7096e-09 10915490000.0 13341070.0 12747270.0 10916570.0 8133320.0 8842620.0 12452960.0 10146490.0 11607400.0 12928560.0 13681400.0 True False 12601014.252336293 12134872.015157633 11620269.569329565 8906308.287428182 9538483.886374544 12375236.457449028 11172196.229399636 11567136.638587523 10581059.406475542 13560193.43996812 0.9292650807764523 0.8948892999852487 0.8569398084749508 0.6567980262860557 0.7034179806211502 0.9126150384384282 0.8238965232214196 0.8530215066470849 0.7803029841217677 1.0 23.69287442328256 -8.834096153055125 12.755971006889133 1.0000063283499332 0.8216181449818772 0.2849227439062645 0.08385692251836979 0.0 0.0 0.08796777231732932 0.021335318642037297 1.4652234037138578e-09 8.834096153055125 -0.17838818336805595 TPSS(ph)PLQSCTPSLSPR ddPTM_KYSE-520_SHP099_60min_R1 2 TPSSPLQSCTPSLSPR 16 0 R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0 R4GNJ5 ACD Adrenocortical dysplasia protein homolog 1 T(0.002)PS(0.033)S(0.966)PLQSCTPSLSPR;TPS(0.041)S(0.958)PLQSCTPSLSPR 229.8 1.0475e-18 1317610000.0 469200.0 546860.0 409250.0 373560.0 357270.0 611110.0 481200.0 599930.0 605940.0 598370.0 True False 443172.5406729887 520588.0247464054 435630.9098231523 409063.0300850902 385385.1164117679 607295.8358102548 529844.3920594326 597848.9828547146 495916.570504356 593068.9073248153 0.7472530345116701 0.8777867433560917 0.7345367535589984 0.6897394637164013 0.6498150748622842 1.0239886601872514 0.8933943181230447 1.0080598990620855 0.8361871013291035 1.0 19.177840212395825 -6.264802687684302 24.99966385910173 0.9491465115011452 0.7444142307891056 0.6627815033405091 0.07573542645786353 197.67432613529596 1469319.1977905212 0.026790717172593622 0.024584348527886216 5.434972016204044e-07 6.264802687684302 -0.20473228071203953 TPSSEEIS(ph)PTKFPGLYR ddPTM_KYSE-520_SHP099_60min_R1 2 TPSSEEISPTKFPGLYR 17 1 Q15311;J3QLT3;E7ENF8;A0A1W2PRI7 Q15311 RALBP1 RalA-binding protein 1 1 TPSSEEIS(0.984)PT(0.016)KFPGLYR;TPSSEEIS(1)PTKFPGLYR 240.31 1.8287e-23 670990000.0 796080.0 813260.0 626840.0 598930.0 602800.0 793650.0 601350.0 630760.0 855650.0 811610.0 True False 751919.8554538633 774189.7688718536 667247.109379461 655852.1271251295 650236.9305371677 788696.5359604812 662140.3266104313 628572.0407804911 700285.5291811925 804419.7668230255 0.9347356771496238 0.962420120442139 0.8294762720894913 0.8153108043520003 0.8083303734631145 0.980453947663865 0.8231278667175068 0.7813980544796565 0.8705473908813794 1.0 19.617589007531063 -4.757161550931806 24.997984850668153 0.8548055398086479 0.9485779292149784 0.18486244613168268 0.06946471211081376 153.26468200905106 895587.2752751798 0.017505948232756533 0.04301724749040935 1.7491958933617824e-05 4.757161550931806 0.09377238940633048 TPSSPLQSCTPSLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 TPSSPLQSCTPSLSPR 16 0 R4GNJ5;A0A590TQL1;Q96AP0-2;Q96AP0 R4GNJ5 ACD Adrenocortical dysplasia protein homolog 1 TPSSPLQSCTPSLS(1)PR 265.34 2.2388000000000002e-29 541360000.0 209820.0 194330.0 168380.0 127950.0 126080.0 204900.0 161850.0 168720.0 223820.0 201170.0 True False 198180.8663341996 184994.0951047233 179234.04421752563 140110.32953042988 136001.77870292988 203621.14309620415 178211.37750378047 168134.74969954405 183179.9300430488 199387.7903078917 0.9939468511495695 0.9278105485750061 0.8989218644770327 0.70270265453102 0.6820968249506046 1.0212317553736634 0.8937928306873208 0.8432549928955672 0.9187118717760252 1.0 17.60521754213894 -9.659015846219857 13.586773250240594 0.9999999299357539 0.8710947641315698 0.11123578852278959 0.10452681319222532 0.0 0.0 0.10820880825569335 0.0262444909447313 2.1927249273451875e-10 9.659015846219857 -0.1289051658041841 TPSSS(ph)PPITPPASETK ddPTM_KYSE-520_SHP099_60min_R1 1 TPSSSPPITPPASETK 16 0 F5GZ90;Q9NZJ0 F5GZ90 DTL Denticleless protein homolog 1 TPSS(0.008)S(0.991)PPITPPASETK 135.09 2.1433000000000003e-05 544080000.0 699170.0 943910.0 733340.0 683590.0 704880.0 1041200.0 715270.0 876200.0 983310.0 1007500.0 True False 660385.6463391595 898563.1467622054 780612.2697854855 748558.1880711714 760350.0457814184 1034701.484586471 787576.4719624891 873160.6667066171 804765.691227908 998574.33382314 0.6613284799848681 0.899846026807006 0.7817267511741811 0.749626905796029 0.7614355987604283 1.0361787295543785 0.7887008961537947 0.8744072795899286 0.8059146564951088 1.0 19.92951030024968 TPSYS(ph)PTQR ddPTM_KYSE-520_SHP099_60min_R1 1 TPSYSPTQR 9 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 T(0.002)PS(0.223)YS(0.775)PTQR 136.86 0.00046628 341770000.0 262220.0 227080.0 249770.0 181590.0 180640.0 194560.0 213420.0 197920.0 250420.0 248310.0 True False 247674.13387738948 216170.73594597113 265870.57384613 198848.25900297592 194855.34029899482 193345.6788716323 234994.5763784785 197233.46171487527 204950.04057448052 246110.16658225667 1.0063547447748775 0.8783494763663939 1.0802909019903038 0.8079644240804471 0.7917403129052326 0.785606224873327 0.9548349003288207 0.8014031458101286 0.8327573111693485 1.0 17.90894472985521 -5.280797469044088 24.756731493228422 0.8440209767184923 0.9773334985926394 0.3562197398989779 0.0819989428031448 736.7402011767311 942202.8240663622 0.022213315362482177 0.03300539092704256 5.238446718501529e-06 5.280797469044088 0.1333125218741471 TPTGEGLLDS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 8 TPTGEGLLDSPSK 13 0 O95425-2;O95425-3;A0A6I8PIX7;O95425-4;O95425;A0A0J9YWY6 O95425-2 SVIL Supervillin 1 TPTGEGLLDS(1)PSK;TPTGEGLLDS(1)PSK;TPTGEGLLDS(1)PSK;TPTGEGLLDS(0.999)PS(0.001)K;TPTGEGLLDS(1)PSK;TPTGEGLLDS(1)PSK;TPTGEGLLDS(1)PSK;TPTGEGLLDS(1)PSK 305.14 1.7537999999999998e-31 7579220000.0 7852880.0 8407940.0 5853450.0 4779620.0 5519940.0 6969780.0 5014310.0 5742450.0 7074280.0 7130950.0 True False 7417265.092071831 8004009.941824772 6230772.752851134 5233873.647754853 5954327.873837653 6926279.017711378 5521205.389749643 5722530.7812479045 5789769.080086411 7067775.3307951465 1.049448340520095 1.1324652478624129 0.8815748182745579 0.7405263187908983 0.842461396288862 0.9799800776819755 0.7811800929343478 0.809665066221637 0.8191784273135694 1.0 22.7528247498052 -4.8249097698151715 5.6664849791846645 0.8451609097073527 1.090580180010181 0.5802237669790536 0.0794918164065115 0.1171788391679184 7.151439571955789 0.020596641400456042 0.045031536092183286 1.496546550317037e-05 4.8249097698151715 0.2454192703028284 TPTHQPPKPGS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 1 TPTHQPPKPGSPGR 14 1 Q96F63 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 1 TPTHQPPKPGS(1)PGR 87.287 0.0033563000000000004 0.0 145260.0 128280.0 156790.0 169080.0 133180.0 129050.0 131100.0 157580.0 147390.0 140150.0 True False 137202.13823136906 122117.23624779446 166896.93427287 185149.3123642444 143660.50830945568 128244.55108133295 144352.86741270055 157033.3917594486 120627.69139953963 138908.38003505018 0.9877167827941655 0.8791207284757127 1.201489314257049 1.3328879965163112 1.0342105225991867 0.9232312049782275 1.0391948086665224 1.1304817730926313 0.8683975104245125 1.0 17.083774110979483 -5.98749882146261 24.999191535332322 1.0006129695138881 1.1032095366513737 0.13233553768736706 0.12953346480656022 557.0564440995777 1113965.3504532252 0.04382778342654702 0.04966306101830837 1.0292033201218059e-06 5.98749882146261 0.10259656713748555 TPTHQPPKPGS(ph)PGRPACPLSNLLLQSYEER ddPTM_KYSE-520_SHP099_60min_R1 5 TPTHQPPKPGSPGRPACPLSNLLLQSYEER 30 2 Q96F63 Q96F63 CCDC97 Coiled-coil domain-containing protein 97 1 T(0.002)PT(0.002)HQPPKPGS(0.982)PGRPACPLS(0.007)NLLLQS(0.003)Y(0.003)EER;T(0.007)PT(0.007)HQPPKPGS(0.985)PGRPACPLSNLLLQSYEER;TPTHQPPKPGS(1)PGRPACPLSNLLLQSYEER;T(0.013)PT(0.013)HQPPKPGS(0.968)PGRPACPLS(0.006)NLLLQSYEER;TPT(0.001)HQPPKPGS(0.999)PGRPACPLSNLLLQSYEER 220.76 1.0695e-22 11378400000.0 1957230.0 1919550.0 1796260.0 2248110.0 1623180.0 1711270.0 1549050.0 1657860.0 2179840.0 1601880.0 True False 1848658.550258725 1827331.9366967077 1912049.793717619 2461769.6984810843 1750915.0313691436 1700589.3291666247 1705643.0912711213 1652109.270607431 1784036.005294611 1587688.5894437814 1.1643709997981215 1.1509385082479437 1.204297748582719 1.550536871555852 1.1028075927550414 1.071110128568976 1.0742932226203523 1.0405751364543208 1.123668720148462 1.0 20.598496538151142 -5.97358093092381 24.999730355127408 1.0676513768597233 1.2636883536282384 0.45097634470531167 0.10811550861389174 220.62143572683894 208767.7779195824 0.034864614075969226 0.03953174604052896 1.0627205264922034e-06 5.97358093092381 0.19603697676851506 TPTS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 8 TPTSPLK 7 0 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 1 T(0.043)PT(0.141)S(0.816)PLK;T(0.007)PT(0.022)S(0.971)PLK;T(0.147)PT(0.161)S(0.691)PLK;T(0.011)PT(0.02)S(0.968)PLK;T(0.003)PT(0.092)S(0.905)PLK;TPT(0.015)S(0.985)PLK;T(0.047)PT(0.028)S(0.925)PLK;T(0.003)PT(0.012)S(0.985)PLK 128.6 0.0021495999999999998 196139900000.0 301006300.0 298220800.0 255933800.0 193525800.0 198448900.0 274721300.0 224015600.0 275559700.0 299827200.0 304251500.0 True False 284308880.49781734 283893825.1294531 272431702.25655854 211918433.84634638 214065699.4102147 273006662.464008 246661283.0295693 274603847.7168175 245386138.5086371 301556068.4140849 0.9428060326990853 0.9414296539362667 0.9034197311607938 0.7027496908314521 0.7098703088152354 0.905326375621551 0.8179615960865485 0.9106228541875745 0.8137330473870037 1.0 28.16785102690442 -9.657048885333932 14.199691949590555 1.0000000053695008 0.8480922965534753 0.22408131719335866 0.08381389956873585 0.0 0.0 0.088247201709389 0.02140309022429402 2.202678509787853e-10 9.657048885333932 -0.15190770881602556 TPTSS(ph)PAS(ph)SPLVAK ddPTM_KYSE-520_SHP099_60min_R1 2 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 2 T(0.001)PT(0.172)S(0.172)S(0.654)PAS(0.904)S(0.096)PLVAK;TPTS(0.004)S(0.996)PAS(0.964)S(0.036)PLVAK 187.16 2.8097e-09 0.0 1568630.0 1320570.0 1357610.0 1249330.0 1306870.0 1493830.0 1310660.0 1462020.0 1738090.0 1442380.0 True False 1481614.9669136198 1257127.8349840192 1445123.7128528033 1368065.947575238 1409713.2339268557 1484506.4528618972 1443154.303608926 1456948.5938580346 1422496.6696833274 1429601.6353546605 1.0363830946136654 0.8793553420020722 1.0108576243299359 0.9569560594660649 0.9860881514570521 1.0384056762033682 1.0094800313031982 1.0191290761195793 0.9950301080415521 1.0 20.44718175914967 -6.02487715446686 6.304516945770199 1.0134421719119842 0.9675898302020733 0.1963715136548645 0.039618638997627846 0.25872007287640736 37.24637221726192 0.012120281526914179 0.012615793370727239 9.443279532816762e-07 6.02487715446686 -0.045852341709910815 TPTSS(ph)PASSPLVAK ddPTM_KYSE-520_SHP099_60min_R1 8 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 TPT(0.001)S(0.007)S(0.864)PAS(0.1)S(0.027)PLVAK;TPTS(0.001)S(0.996)PAS(0.002)S(0.001)PLVAK;TPTSS(0.996)PAS(0.004)SPLVAK;TPT(0.001)S(0.019)S(0.978)PAS(0.001)S(0.001)PLVAK;TPT(0.01)S(0.091)S(0.897)PAS(0.001)S(0.001)PLVAK;TPTS(0.043)S(0.924)PAS(0.026)S(0.008)PLVAK;TPTSS(1)PASSPLVAK;TPTSS(0.89)PAS(0.028)S(0.082)PLVAK 246.31 1.2725e-18 9727020000.0 8889970.0 10128110.0 7395870.0 6108650.0 6269240.0 10190700.0 7545470.0 9809950.0 10638230.0 10166350.0 True False 8396825.64238417 9641540.392996956 7872619.614010402 6689214.259367412 6762593.520903843 10127096.061251778 8308239.7442906955 9775921.573109532 8706595.599954708 10076284.048300615 0.8333256190609584 0.9568547637978726 0.7813018744085658 0.6638572540534485 0.6711396273157234 1.0050427332841747 0.8245340945595809 0.9701911464830391 0.8640680987375592 1.0 23.26446036123541 -6.269677404165538 24.987975615338392 0.9241395884604132 0.7845250713264653 0.39430664489287603 0.09351850511674817 780.2984032434671 2366831.836332085 0.035440616209443825 0.03179079961286543 5.374308541223537e-07 6.269677404165538 -0.1396145171339479 TPTSSPAS(ph)SPLVAK ddPTM_KYSE-520_SHP099_60min_R1 1 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 TPTSS(0.002)PAS(0.543)S(0.455)PLVAK 152.88 1.8874000000000001e-06 246020000.0 207110.0 293800.0 206140.0 190260.0 191650.0 347210.0 262660.0 280540.0 314440.0 328420.0 True False 195621.19543645097 279685.4069972095 219428.1142356617 208342.2531962449 206731.7646606639 345042.93359898974 289212.23611456883 279566.87221852806 257345.62238734798 325510.45430689334 0.600967473849605 0.8592209660139526 0.6741046603338382 0.6400478093395382 0.6351002308078126 1.0600056896288839 0.8884883182335449 0.8588568155631359 0.7905909594679895 1.0 18.312344353110397 -6.244860345113339 24.909157102273866 0.908823162042741 0.6889831500367493 0.6086058218845076 0.09502919225489079 598.9262761366783 899856.7429901245 0.03199018313315134 0.03190611159060852 5.690358847366782e-07 6.244860345113339 -0.2198400120059918 TPTSSPASS(ph)PLVAK ddPTM_KYSE-520_SHP099_60min_R1 2 TPTSSPASSPLVAK 14 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 TPTSS(0.001)PAS(0.23)S(0.769)PLVAK;TPTSSPAS(0.371)S(0.629)PLVAK 194.13 7.3173e-11 1096910000.0 894010.0 1145970.0 821740.0 747320.0 763630.0 1377320.0 945340.0 1137430.0 1285250.0 1413090.0 True False 844417.4831352483 1090915.8810639614 874710.6752304876 818345.0681100498 823723.3365396432 1368723.634989088 1040904.1928293098 1133484.520808157 1051880.9985158977 1400571.1219673858 0.6029093916695162 0.7789078783314832 0.6245385625271063 0.5842938321907698 0.5881338859697157 0.9772610712310263 0.7431998107794405 0.809301650612322 0.75103718905636 1.0 20.417583815645816 -6.2447360432412315 24.992275267046878 0.8371812960277099 0.6402272669537488 0.5708311718416487 0.09480307891190291 678.7957028591542 1015645.1294240628 0.03108649466425382 0.031006526602164644 5.691987750150887e-07 6.2447360432412315 -0.1969540290739611 TPTVPDS(ph)PGYMGPTR ddPTM_KYSE-520_SHP099_60min_R1 2 TPTVPDSPGYMGPTR 15 0 A0A087WXN9;Q765P7 A0A087WXN9 MTSS1L MTSS1-like protein 1 TPTVPDS(1)PGYMGPTR;TPTVPDS(0.958)PGY(0.004)MGPT(0.038)R 153.79 3.1223e-06 687110000.0 373020.0 399040.0 371330.0 408250.0 433390.0 627220.0 537400.0 681710.0 821840.0 665610.0 True False 352327.83700306516 379869.5194287492 395266.5259490071 447049.9572551619 467495.327348214 623305.2873245542 591725.636518576 679345.3071223109 672614.5729004515 659713.2132367445 0.5340621196208009 0.575810082027915 0.5991490211477117 0.6776428731233153 0.7086341731046225 0.944812495518223 0.8969437395613137 1.029758527632402 1.019556012225993 1.0 19.331479475031042 -6.109009387296118 0.8663191776033888 1.0228260015577606 0.5481464749658839 0.963910021578075 0.035843555930383554 0.09574414181828673 0.15734616568884546 0.02044367067827039 0.022438538328294184 7.780197339240777e-07 6.109009387296118 -0.47467952659187673 TPVQYSQQQNS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 11 TPVQYSQQQNSPQK 14 0 P46013 P46013 MKI67 Antigen KI-67 1 TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK;TPVQYSQQQNS(1)PQK 431.82 6.298699999999997e-113 22895420000.0 7017770.0 7008530.0 5963560.0 5000072.0 4756052.0 7398910.0 5873624.0 7816050.0 8878750.0 6840660.0 True False 6628480.308522331 6671829.698781991 6347980.619633372 5475277.3395535415 5130326.234165816 7352730.65820369 6467387.234966109 7788937.946829793 7266592.815073365 6780057.074352943 0.9776437330588285 0.9840373946142215 0.9362724457948893 0.8075562313870457 0.7566789155171573 1.0844644193360866 0.9538838927227358 1.1488012359502346 1.0717598296570172 1.0 22.69286598730812 -6.290440789921997 24.99206842251891 1.0549633470458974 0.8952462126785803 0.48822869962288884 0.08151247326516013 688.2141715496681 593068.779232488 0.031243447818886924 0.027558684209053 5.123411161660607e-07 6.290440789921997 -0.15971713436731716 TPVS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 6 TPVSPVK 7 0 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 T(0.039)PVS(0.961)PVK;T(0.004)PVS(0.996)PVK;T(0.016)PVS(0.984)PVK;T(0.002)PVS(0.998)PVK;T(0.041)PVS(0.959)PVK;TPVS(1)PVK 112.8 0.0028791999999999997 8719500000.0 32486600.0 30231900.0 22565000.0 20603500.0 21458200.0 29839500.0 22660900.0 28073300.0 30730000.0 30002900.0 True False 30684503.53756843 28779514.144992933 24019576.005276527 22561650.445331845 23146838.25954319 29653260.61209945 24951684.92107142 27975920.274657495 25150206.640259515 29737097.647902954 1.0318593933033773 0.967798353617151 0.8077310129480768 0.7587038490598251 0.7783825621992231 0.9971807256782029 0.8390759991613036 0.9407750751570183 0.8457518934109259 1.0 24.825760510885416 -8.828927732356101 18.843080985103427 0.9999999999999981 0.8821007109242971 0.12659259355851726 0.09008068269714817 0.0 0.0 0.09228318409434443 0.02238195973466481 1.482764800239116e-09 8.828927732356101 -0.11789928907570102 TPVS(ph)PVKFS(ph)PGDFWGR ddPTM_KYSE-520_SHP099_60min_R1 5 TPVSPVKFSPGDFWGR 16 1 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 2 T(0.091)PVS(0.909)PVKFS(1)PGDFWGR;T(0.003)PVS(0.997)PVKFS(1)PGDFWGR;T(0.022)PVS(0.978)PVKFS(1)PGDFWGR;T(0.098)PVS(0.902)PVKFS(1)PGDFWGR;T(0.025)PVS(0.975)PVKFS(1)PGDFWGR 172.24 2.1069e-08 1621573000.0 2402260.0 2375720.0 2261260.0 2302590.0 2545190.0 2543330.0 2033670.0 2140450.0 2590500.0 2299270.0 True False 2269001.8490134142 2261586.845171582 2407024.437743924 2521427.46130107 2745481.9728498594 2527456.134069637 2239253.2103065373 2133025.278534785 2120130.5011907686 2278900.2566049933 0.9956564981012704 0.9924027340015293 1.0562219345790083 1.106422913417625 1.2047398585754514 1.1090683441472473 0.9826025530588511 0.9359888711024472 0.9303305377433443 1.0 21.119906351123348 -6.884556961933944 4.864920312366057 0.9516964197825427 1.0793535415924906 0.47460693136266163 0.05968716223125979 0.2090408360458304 7.989734613959884 0.029752800617348522 0.019776388358327106 1.3044968600020954e-07 6.884556961933944 0.12765712180994793 TPVS(ph)PVKFSPGDFWGR ddPTM_KYSE-520_SHP099_60min_R1 3 TPVSPVKFSPGDFWGR 16 1 P23443-3;P23443-5;P23443-2;P23443 P23443-3 RPS6KB1 Ribosomal protein S6 kinase beta-1 1 T(0.015)PVS(0.984)PVKFS(0.001)PGDFWGR;T(0.177)PVS(0.823)PVKFSPGDFWGR;T(0.034)PVS(0.966)PVKFSPGDFWGR 195.53 1.7019e-12 6843990000.0 1684860.0 1705810.0 1657790.0 1209140.0 1232540.0 1277770.0 1037600.0 1075170.0 1846480.0 1150730.0 True False 1591397.45711486 1623860.3271269891 1764653.795957782 1324056.3020588027 1329533.885806703 1269794.9634652855 1142490.7340001375 1071440.486216565 1511205.777972875 1140535.4274543934 1.395307343207009 1.4237701767417676 1.5472152407368733 1.1609076493257355 1.1657102916777806 1.11333232874615 1.0017143759840132 0.9394188557631706 1.3249967879961393 1.0 20.12127982984441 -5.391630693122908 4.1676820724479295 1.089732387161835 1.4510626726576217 0.6991052186950232 0.1071143113383407 0.12884651668880362 3.7289353265194896 0.031122365044859535 0.04724558945941226 4.058535105491832e-06 5.391630693122908 0.3613302854957867 TPVSGS(ph)LKSPVPR ddPTM_KYSE-520_SHP099_60min_R1 1 TPVSGSLKSPVPR 13 1 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 TPVS(0.001)GS(0.542)LKS(0.457)PVPR 130.27 6.1095e-05 681170000.0 616180.0 615550.0 535350.0 529460.0 473750.0 561340.0 539130.0 616920.0 650010.0 594270.0 True False 581999.267075623 585978.0540406129 569859.5175902861 579779.7192120465 511031.4297312269 557836.4688414992 593630.5218017484 614780.0485102112 531984.569418649 589005.2301350646 0.9881054314953451 0.9948605276497162 0.9674948344000474 0.9843371324208741 0.8676178131967393 0.9470823692237536 1.007852717480324 1.0437599142697531 0.9031915884629068 1.0 19.167920919114653 -6.756224419345434 24.904861618809555 0.9923477154123753 0.9574002090303964 0.08885134976012499 0.04715073236580361 299.17976056238876 1428788.1430273184 0.019070813937453846 0.014314747485241091 1.752974427618988e-07 6.756224419345434 -0.034947506381978966 TPVSGSLKS(ph)PVPR ddPTM_KYSE-520_SHP099_60min_R1 3 TPVSGSLKSPVPR 13 1 A0A0C4DG98;Q8NI27-2;Q8NI27;H0Y7U4;H7C477 A0A0C4DG98 THOC2 THO complex subunit 2 1 TPVSGS(0.202)LKS(0.798)PVPR;TPVS(0.001)GS(0.013)LKS(0.987)PVPR;TPVS(0.009)GS(0.237)LKS(0.754)PVPR 125.28 0.00010904 3782220000.0 1896200.0 1844010.0 1519680.0 1394280.0 1477240.0 1763990.0 1486700.0 1796790.0 1972320.0 1863300.0 True False 1791014.0060190165 1755420.99168456 1617641.0043739693 1526791.9519944333 1593490.3836541567 1752980.2840911318 1636990.144793762 1790557.3548639365 1614196.4061411228 1846792.6116254637 0.9697970387929192 0.9505241577393563 0.8759191444621356 0.8267262617271464 0.8628420828755852 0.9492025650612915 0.8863963037803995 0.9695497716378498 0.8740539657673743 1.0 20.81659043511485 -9.88263205205059 0.501044504501675 1.0263787522626657 0.9032667835461181 0.2488680651181564 0.04758642441075308 25.20192895103154 4.270769121884462 1.0709795948429637 0.02484798240642597 1.3102915731146357e-10 9.88263205205059 -0.12311196871654762 TQAPT(ph)KASE ddPTM_KYSE-520_SHP099_60min_R1 1 TQAPTKASE 9 1 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 1 TQAPT(0.811)KAS(0.189)E 90.82700000000001 0.01296 2780000000.0 5248500.0 4668300.0 4429300.0 4568500.0 4635900.0 4456900.0 4557900.0 4352800.0 5642500.0 4841100.0 True False 4957355.242374643 4444027.860738843 4714819.765130569 5002688.866430389 5000718.955337188 4429082.83389689 5018657.012817295 4337701.152751161 4617964.2358498 4798211.62031881 1.033167278696486 0.9261842145352408 0.9826202214935447 1.0426153038448087 1.04220475273763 0.9230695068014958 1.045943240928552 0.9040245608139619 0.9624344654358878 1.0 22.194065356978832 -7.264241994099659 24.998846751895357 0.9499221395509649 0.9963118283855832 0.1430050415095292 0.04828301399830031 468.45944579228563 4178530.4315757076 0.024647569889445727 0.012684630987935944 5.441993339410192e-08 7.264241994099659 0.04638968883461825 TQAPTKAS(ph)E ddPTM_KYSE-520_SHP099_60min_R1 3 TQAPTKASE 9 1 A0A3B3ITT5;P47914 A0A3B3ITT5 RPL29 60S ribosomal protein L29 1 TQAPT(0.033)KAS(0.967)E;TQAPT(0.007)KAS(0.993)E;TQAPT(0.209)KAS(0.791)E 109.39 0.0015282 8097900000.0 8820400.0 7238800.0 7441900.0 7111000.0 7722600.0 6768800.0 7395600.0 6785200.0 8221300.0 6955800.0 True False 8331114.82896853 6891037.182339683 7921616.781460994 7786827.301999898 8330324.684416604 6726553.408441119 8143219.422100442 6761663.724877588 6728519.162107573 6894177.023530504 1.2084277500466867 0.9995445662070899 1.1490300806642675 1.1294788740443842 1.208313139622668 0.9756862038039829 1.1811735315624816 0.9807789532817863 0.9759713362657321 1.0 22.716946912951126 -7.27974659068629 24.186733372926632 0.9837813164654906 1.1160390483511335 0.4076801042188771 0.07494308718148965 554.3534329782638 732383.6896004536 0.03875320609854676 0.018681545459399658 5.2511377292779e-08 7.27974659068629 0.13225773188564294 TQASS(ph)SPAALKPPAGR ddPTM_KYSE-520_SHP099_60min_R1 1 TQASSSPAALKPPAGR 16 1 H7C1J4;Q6BDS2 H7C1J4 UHRF1BP1 UHRF1-binding protein 1 1 T(0.009)QAS(0.105)S(0.443)S(0.443)PAALKPPAGR 81.807 0.0041996 447620000.0 294990.0 288750.0 232620.0 193510.0 219840.0 221420.0 217710.0 222610.0 253790.0 217550.0 True False 278626.31665201404 274878.0165774138 247615.05740516 211901.1322190972 237140.15728150436 220038.0356484211 239718.25144484377 221837.81786756468 207708.13352526745 215622.67625133885 1.292193944978382 1.2748103370027946 1.148372062298909 0.9827404793552248 1.0997922918138898 1.0204772497672532 1.1117487993953759 1.028824155809017 0.9632944787456126 1.0 17.718149383487518 -4.929545382490765 2.803786924073187 1.036865949808299 1.2885447896877524 0.8344372141590349 0.045163173732355205 0.09857813303643971 1.555228420914457 0.012400026882428777 0.03054661281417287 1.1761280763525139e-05 4.929545382490765 0.2516788398794534 TQASSS(ph)PAALKPPAGR ddPTM_KYSE-520_SHP099_60min_R1 1 TQASSSPAALKPPAGR 16 1 H7C1J4;Q6BDS2 H7C1J4 UHRF1BP1 UHRF1-binding protein 1 1 T(0.002)QAS(0.03)S(0.191)S(0.776)PAALKPPAGR 109.5 0.00015649 624580000.0 353450.0 382420.0 298700.0 252590.0 252490.0 335210.0 223740.0 233940.0 359090.0 327100.0 True False 333843.42391489336 364047.9691758771 317954.6799368983 276596.07765604736 272359.5265284163 333117.8300501641 246357.82269197254 233128.51674200656 293888.30792225193 324202.14847994933 1.0297384686688476 1.1229042462634762 0.9807297127044258 0.8531592987674287 0.8400916767683319 1.0275003778106244 0.7598895437523877 0.7190838118595154 0.9064971015774369 1.0 18.306534126029767 -5.059769697793436 3.24316028342932 0.8612804031849116 1.075293600476846 0.44033903282736286 0.0921531488211905 0.21565415378924857 4.470669867754955 0.026258583420421283 0.053415102981659086 8.714255760933128e-06 5.059769697793436 0.21401319729193446 TQATGLTKPTLPPS(ph)PLMAAR ddPTM_KYSE-520_SHP099_60min_R1 1 TQATGLTKPTLPPSPLMAAR 20 1 B1AHC3;B1AHC4;H0Y9T8;P85298-4;P85298-3;P85298 B1AHC3 PRR5-ARHGAP8;ARHGAP8 Rho GTPase-activating protein 8 1 TQATGLTKPT(0.019)LPPS(0.981)PLMAAR 123.35 3.1508000000000004e-05 599280000.0 484580.0 550990.0 390220.0 354450.0 413350.0 570640.0 390450.0 540970.0 643550.0 561860.0 True False 457699.3814137195 524519.6133471488 415374.2055740754 388136.82143072196 445878.2933602161 567078.42409184 429920.4964247819 539093.5013333469 526697.5425753023 556882.3575204657 0.8218959987377563 0.9418858512282324 0.7458921978127313 0.6969817164955845 0.8006687361142156 1.018309193016587 0.7720131381770019 0.9680563480834189 0.9457967835799967 1.0 19.087013062060226 -6.228256051708878 23.01627681770425 0.9282872279971275 0.8003739904825893 0.3932389687100343 0.08585077538583791 295.47646304673833 204944.75852826232 0.029346015467514492 0.029342838448033277 5.912129635604711e-07 6.228256051708878 -0.1279132375145382 TQCIPYS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 TQCIPYSPK 9 0 E9PM59;Q9H5J8 E9PM59 TAF1D TATA box-binding protein-associated factor RNA polymerase I subunit D 1 TQCIPYS(1)PK;TQCIPYS(1)PK 121.66 0.00073507 1560800000.0 3312900.0 2949900.0 2511300.0 2441650.0 2514700.0 2758800.0 2573400.0 2775900.0 2912600.0 2884900.0 True False 3129126.832897578 2808182.3761098273 2673182.4162220713 2673703.681891161 2712592.5833142246 2741581.3058750974 2833544.3859637175 2766271.05079993 2383745.260671003 2859342.03041824 1.0943520570849217 0.9821078927375018 0.9348942476220871 0.9350765502859673 0.9486771972212956 0.9588154465991193 0.9909777689482118 0.9674502110526818 0.8336691572089853 1.0 21.447251772739993 -4.288914257474996 2.6937503715790707 0.9469079437199669 1.1183045484016902 0.516808024004741 0.043009425174601296 0.3344261920316322 3.39111027298999 0.010941396530501711 0.12448140558152057 5.141451489618847e-05 4.288914257474996 0.17139660468172335 TQDPSS(ph)PGTT(ph)PPQAR ddPTM_KYSE-520_SHP099_60min_R1 2 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 2 TQDPSS(0.982)PGT(0.061)T(0.957)PPQAR;TQDPS(0.152)S(0.853)PGT(0.003)T(0.992)PPQAR 183.76 3.1094e-08 530330000.0 659020.0 577470.0 586670.0 525970.0 586650.0 546170.0 570130.0 587440.0 687640.0 562010.0 True False 622462.8468762008 549727.4743998591 624487.6869051893 575958.0306613534 632816.0174180984 542761.1504385252 627764.3043325933 585402.3077495265 562781.9099937547 557031.0286371639 1.117465302425114 0.9868884247702076 1.1211003603032048 1.0339783621578431 1.1360516468289936 0.9743822561670371 1.126982649186502 1.0509330318308765 1.0103241669870007 1.0 19.087398167557158 -7.720799049833492 3.775504342641781 1.0023904059767605 1.0682639324860794 0.18251177618977998 0.0547240875172204 0.3608037890428876 10.131702867560229 0.042586321441752756 0.012932594026839063 1.9019581216163605e-08 7.720799049833492 0.06587352650931888 TQDPSS(ph)PGTTPPQAR ddPTM_KYSE-520_SHP099_60min_R1 3 TQDPSSPGTTPPQAR 15 0 Q13112 Q13112 CHAF1B Chromatin assembly factor 1 subunit B 1 TQDPS(0.004)S(0.906)PGT(0.08)T(0.01)PPQAR;TQDPS(0.063)S(0.929)PGT(0.007)T(0.001)PPQAR;TQDPS(0.002)S(0.956)PGT(0.034)T(0.007)PPQAR 207.85 5.2169e-13 3250400000.0 3057970.0 3421130.0 2521870.0 1881600.0 2100530.0 3214920.0 2433070.0 3031860.0 3513100.0 3265740.0 True False 2888338.3081879336 3256773.7795791784 2684433.775334666 2060426.6982763314 2265829.7606191705 3194854.4917659773 2679028.4600749034 3021343.1853014436 2875209.5980441156 3236808.0843072752 0.8923415392439248 1.0061683284123952 0.8293459807979856 0.636561280313687 0.7000198039557516 0.9870385912761718 0.827676028450187 0.9334329087812 0.8882854723404007 1.0 21.626140397637336 -7.26554522829282 23.219289223132517 0.9331444191707251 0.8383303295383434 0.1499003547950598 0.10941563580090076 314.34607510930306 1777638.8043737556 0.06328750398563496 0.03220597552658022 5.4256874419641596e-08 7.26554522829282 -0.09481408963238169 TQEDEEEISTS(ph)PGVSEFVSDAFDACNLNQEDLRK ddPTM_KYSE-520_SHP099_60min_R1 4 TQEDEEEISTSPGVSEFVSDAFDACNLNQEDLRK 34 1 Q96A49 Q96A49 SYAP1 Synapse-associated protein 1 1 TQEDEEEIS(0.015)T(0.047)S(0.91)PGVS(0.028)EFVS(0.001)DAFDACNLNQEDLRK;TQEDEEEIST(0.037)S(0.962)PGVSEFVSDAFDACNLNQEDLRK;TQEDEEEIST(0.003)S(0.997)PGVSEFVSDAFDACNLNQEDLRK;TQEDEEEIS(0.005)T(0.036)S(0.949)PGVS(0.01)EFVSDAFDACNLNQEDLRK 194.75 9.9699e-16 415289000.0 479955.0 550610.0 450079.0 356706.0 381093.0 480290.0 358748.0 461999.0 663301.0 467154.0 True False 453330.9393834277 524157.8691175408 479091.81249186216 390607.2309924309 411082.8509774401 477292.33195547096 395013.74888307776 460396.4333003777 542862.2588574943 463015.3790003125 0.9790839785110502 1.132052827811551 1.0347211652586141 0.8436161058748921 0.887838438250153 1.0308347273172298 0.8531331070167567 0.9943437176847358 1.172449735966822 1.0 18.820700587661 -9.98834760930931 9.830910422046287 1.0000046828192932 0.9870812203857329 0.0 0.10394823373869014 0.0 0.0 0.1052658423908914 0.02553071687925097 1.0271938030736999e-10 9.98834760930931 -0.012923462433560351 TQHIQQPR ddPTM_KYSE-520_SHP099_60min_R1 3 TQHIQQPR 8 0 P51397 P51397 DAP Death-associated protein 1 0 ;; 104.17 0.003406 218410000.0 290394.0 294638.0 320539.0 264108.0 264514.0 248502.0 196543.0 246240.0 249864.0 229583.0 False True 274285.26593391295 280483.14821934566 341201.4568205331 289208.7449130341 285329.7469212151 246951.00684086353 216411.4845148316 245385.85091284782 204494.99615886112 227549.07323287142 1.2053895102144063 1.2326270735117522 1.4994631794054858 1.2709730732107214 1.2539262097069124 1.0852648324703849 0.9510541240190342 1.0783865098924064 0.8986852517284613 1.0 17.79581818491315 -6.31457590232697 2.070990127777223 0.9867899215875355 1.3098728869147847 0.7512967313005804 0.08521143275602609 0.1677256995626794 1.4132719029999063 0.03555845999555741 0.031515401301488166 4.84645402985836e-07 6.31457590232697 0.3230829653272491 TQLAS(ph)WSDPTEETGPVAGILDTETLEK ddPTM_KYSE-520_SHP099_60min_R1 10 TQLASWSDPTEETGPVAGILDTETLEK 27 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 T(0.005)QLAS(0.826)WS(0.142)DPT(0.025)EET(0.003)GPVAGILDTETLEK;T(0.015)QLAS(0.934)WS(0.045)DPT(0.005)EET(0.001)GPVAGILDTETLEK;T(0.014)QLAS(0.972)WS(0.014)DPTEETGPVAGILDTETLEK;T(0.003)QLAS(0.708)WS(0.289)DPT(0.001)EETGPVAGILDTETLEK;T(0.009)QLAS(0.812)WS(0.161)DPT(0.018)EETGPVAGILDTETLEK;T(0.01)QLAS(0.954)WS(0.035)DPT(0.001)EETGPVAGILDTETLEK;T(0.113)QLAS(0.381)WS(0.381)DPT(0.113)EET(0.013)GPVAGILDTETLEK;T(0.007)QLAS(0.956)WS(0.037)DPTEETGPVAGILDTETLEK;T(0.193)QLAS(0.369)WS(0.369)DPT(0.054)EET(0.014)GPVAGILDTETLEK;T(0.31)QLAS(0.524)WS(0.148)DPT(0.017)EETGPVAGILDTETLEK 337.16 1.3258999999999997e-78 4402760000.0 1320054.0 1576041.0 1226775.0 1139846.0 1268851.0 1885023.0 1501538.0 2108857.0 2419203.0 2254761.0 True False 1246827.9731575912 1500325.6246742296 1305854.879409399 1248176.621132805 1368702.3549253743 1873257.8722432223 1653328.1146386866 2101541.867277923 1979936.7183448034 2234785.5717175133 0.5579183922327541 0.6713510430985893 0.584331175185547 0.5585218720440979 0.6124535491221546 0.838227119393632 0.7398151015303202 0.940377409749792 0.8859627265371821 1.0 21.091704980392443 -6.781679653362418 0.8210378384823795 0.9692200522024284 0.5852983670842573 0.8565821876008909 0.05987789527446794 0.22794552209825666 0.30018749966024133 0.048678026364296606 0.028676042940972365 1.6531807767179505e-07 6.781679653362418 -0.38392168511817104 TQLASWS(ph)DPTEETGPVAGILDTETLEK ddPTM_KYSE-520_SHP099_60min_R1 2 TQLASWSDPTEETGPVAGILDTETLEK 27 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 T(0.015)QLAS(0.303)WS(0.498)DPT(0.179)EET(0.005)GPVAGILDTETLEK;T(0.007)QLAS(0.3)WS(0.507)DPT(0.16)EET(0.027)GPVAGILDTETLEK 144.0 3.839e-08 227070000.0 98545.0 136654.0 96563.0 94108.0 100278.0 145314.0 127025.0 171608.0 184255.0 178529.0 True False 93078.51240541291 130088.93671816406 102787.60548626272 103051.9960253982 108169.30809622767 144407.04142450853 139865.92664453306 171012.7319016085 150798.9366905636 176947.3719534602 0.526023706245798 0.7351843391739064 0.5808936541498756 0.5823878302781598 0.611307796787611 0.8161016455361073 0.7904379991657625 0.9664609878839421 0.85222478879328 1.0 17.43296080925525 -6.618400075811549 1.2331217780301411 0.9344474507747355 0.6056443708384572 0.8078449960744032 0.06958242918114824 0.19451176411611623 0.6021797014829592 0.040520236410939534 0.02650807598920179 2.407686425320543e-07 6.618400075811549 -0.3288030799362782 TQLEELEDELQATEDAK ddPTM_KYSE-520_SHP099_60min_R1 4 TQLEELEDELQATEDAK 17 0 P35579;P35579-2;P35749-4;P35749-3;P35749;P35749-2;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35580 MYH9;MYH11;MYH10 Myosin-9;Myosin-11;Myosin-10 0 ;;; 193.96 1.6041e-11 382678000.0 283719.0 318272.0 561826.0 235828.0 325958.0 293832.0 258199.0 245426.0 424786.0 332407.0 False True 267980.5414901954 302981.7353839882 598042.2029133841 258241.02221572638 351609.04015267757 291998.0854965541 284300.27469940385 244574.67448885881 347655.57038364065 329462.1325887325 0.8133879890370145 0.9196253693962462 1.8152077090447294 0.7838261113245708 1.067221405355228 0.8862872440064461 0.8629224623343763 0.7423453268122965 1.0552216354940522 1.0 18.329753130061953 TQLS(ph)PSIK ddPTM_KYSE-520_SHP099_60min_R1 7 TQLSPSIK 8 0 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TQLS(0.922)PS(0.078)IK;TQLS(0.707)PS(0.293)IK;TQLS(0.982)PS(0.018)IK;TQLS(0.996)PS(0.004)IK;TQLS(0.991)PS(0.009)IK;TQLS(0.809)PS(0.191)IK;TQLS(0.996)PS(0.004)IK 146.16 0.00050042 15628670000.0 20407150.0 19556450.0 15969010.0 15055120.0 16804510.0 21528120.0 18116900.0 21552790.0 22029740.0 21421030.0 True False 19275124.708855044 18616928.78717009 16998397.935919397 16485954.078313127 18126929.332417294 21393755.01762936 19948333.055905063 21478028.401948985 18029694.5405529 21231256.33950918 0.9078654791137358 0.876864208573748 0.8006308088460657 0.7764945142522943 0.8537850536279827 1.0076537476408207 0.9395738404223998 1.0116230551076992 0.849205259087824 1.0 24.339686408095034 -6.168684136514734 6.19931124269357 0.9606703196757833 0.8376603709238163 0.5316813996034009 0.05559583467976328 0.19276904068002526 10.652631455245217 0.018614986134504765 0.018622058515849815 6.781345372780398e-07 6.168684136514734 -0.12300994875196702 TQLS(ph)PSIKR ddPTM_KYSE-520_SHP099_60min_R1 3 TQLSPSIKR 9 1 H0Y9Y2;Q8NFC6 H0Y9Y2;Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TQLS(0.945)PS(0.055)IKR;TQLS(0.8)PS(0.2)IKR;TQLS(0.999)PS(0.001)IKR 136.82 0.00030411 21458500000.0 14801200.0 12541400.0 12738900.0 11278500.0 12091100.0 11751600.0 11820300.0 12173900.0 15332000.0 12614400.0 True False 13980147.930539299 11938892.318974815 13560069.876960648 12350405.24899533 13042600.78105167 11678253.90536532 13015211.279011037 12131671.582309624 12548095.288267462 12502646.229854684 1.1181751185726214 0.9549092327723632 1.0845759871682983 0.9878232993191616 1.0431872214305835 0.9340625728879041 1.0409965250342295 0.9703283096454236 1.0036351551165426 1.0 23.575730142990473 -4.245128292675948 24.27183088368663 1.0037352770953332 1.1181752507053504 0.40043654889775315 0.04254588827083385 2077.7961920438215 3091806.587691028 0.009838111547918756 0.24192346845504137 5.686849137735152e-05 4.245128292675948 0.11443997361001723 TQLS(ph)QGR ddPTM_KYSE-520_SHP099_60min_R1 3 TQLSQGR 7 0 Q8ND56-2;Q8ND56 Q8ND56-2 LSM14A Protein LSM14 homolog A 1 T(0.027)QLS(0.973)QGR;TQLS(1)QGR;TQLS(1)QGR 72.365 0.02522 1946730000.0 5788200.0 4758500.0 5165200.0 4603000.0 5165400.0 5582900.0 5651700.0 5553700.0 6882700.0 6264700.0 True False 5467117.007509361 4529894.517345879 5498157.0566122 5040467.736057592 5571887.592894304 5548055.050228392 6223028.991276577 5534435.510943321 5632975.17874762 6209199.631862851 0.8804865895202577 0.7295456396828466 0.8854856314166649 0.8117741472173245 0.8973600340214308 0.8935217707864055 1.002227237040787 0.8913283255611656 0.9071982723573095 1.0 22.56597588582807 -6.002952705181654 1.4706811452249358 0.9402770804569333 0.8197039892380242 0.49094066125410274 0.053883262582386224 0.33880291579025845 1.5013085366325611 0.021168261782212264 0.023608802553514354 9.93224204988977e-07 6.002952705181654 -0.12057309121890902 TQLS(ph)QGRS(ph)SPQLDPLRK ddPTM_KYSE-520_SHP099_60min_R1 1 TQLSQGRSSPQLDPLRK 17 2 Q8ND56-2;Q8ND56 Q8ND56-2 LSM14A Protein LSM14 homolog A 2 T(0.028)QLS(0.951)QGRS(0.539)S(0.482)PQLDPLRK 63.69 0.019672 511720000.0 514270.0 429360.0 493450.0 458230.0 491160.0 565480.0 460940.0 596740.0 848940.0 563920.0 True False 485742.4179281711 408732.9011175007 525258.576547915 501780.0414281268 529811.4976818768 561950.629565845 507536.3135408859 594670.0482201629 694793.8960358592 558924.1075231205 0.8690668578973002 0.7312851523417122 0.9397672590570575 0.8977605987542238 0.9479131255041823 1.0054149069649843 0.9080594426138456 1.0639549094696434 1.2430916589281638 1.0 19.092292877124013 -6.1642301909502715 0.5569293316894464 1.1020269885788483 0.8055273630299599 0.5539056846426726 0.08509208449853257 0.7165686502134321 0.4808530422843654 0.07225839016520141 0.09532488618567792 6.851249904864885e-07 6.1642301909502715 -0.2964996255488884 TQLS(ph)QGRSS(ph)PQLDPLRK ddPTM_KYSE-520_SHP099_60min_R1 1 TQLSQGRSSPQLDPLRK 17 2 Q8ND56-2;Q8ND56 Q8ND56-2 LSM14A Protein LSM14 homolog A 2 T(0.106)QLS(0.604)QGRS(0.443)S(0.848)PQLDPLRK 64.295 0.014292 614250000.0 348900.0 323580.0 337790.0 318300.0 334580.0 382740.0 329760.0 371830.0 672170.0 404170.0 True False 329545.82148509304 308034.7310965182 359564.4838831095 348551.1362996157 360909.54250020796 380351.17768980545 363095.3589474613 370540.2085157746 550120.8720267895 400589.3682395021 0.8226524406610464 0.768953835320842 0.8975886840514828 0.8700958236395979 0.900946383291005 0.9494789623632829 0.9064028846875835 0.9249876254684776 1.3732787628499574 1.0 18.611764606541783 -7.62477640983999 7.348793905358777 1.18370314452739 0.8773874649797674 0.6241715929587343 0.0957595655698333 0.13517455927042155 8.508604216794218 0.06295325795305676 0.023384892791389385 2.372594887046056e-08 7.62477640983999 -0.3063156795476226 TQLSQGRS(ph)S(ph)PQLDPLRK ddPTM_KYSE-520_SHP099_60min_R1 1 TQLSQGRSSPQLDPLRK 17 2 Q8ND56-2;Q8ND56 Q8ND56-2 LSM14A Protein LSM14 homolog A 2 T(0.001)QLS(0.011)QGRS(0.991)S(0.998)PQLDPLRK 70.99 0.013484999999999999 605230000.0 861940.0 878670.0 951130.0 776700.0 873190.0 1057700.0 816470.0 949000.0 1566800.0 1079500.0 True False 814126.4699652089 836457.3742894423 1012441.3616618074 850517.3344766304 941905.0852285167 1051098.5019661058 899006.755579311 945708.1404982645 1282308.6158138176 1069936.469838291 0.760911038099538 0.7817822813497175 0.9462630634647183 0.7949232112867194 0.8803373955192642 0.982393377174037 0.8402431180939052 0.8838918638236509 1.1984904262657992 1.0 20.029093704856855 -6.815914255488141 0.4987953644828403 1.0553507449533175 0.8009962213549996 0.44955656944011635 0.09270285600857645 0.9531298042902165 0.5154534202548258 0.09181014761460736 0.08001235327063269 1.527867681542766e-07 6.815914255488141 -0.2543545235983179 TQLWASEPGT(ph)PPLPTSLPSQNPILK ddPTM_KYSE-520_SHP099_60min_R1 2 TQLWASEPGTPPLPTSLPSQNPILK 25 0 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5;Q9BXP5-5;H7C3A1 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 1 TQLWAS(0.003)EPGT(0.997)PPLPTSLPSQNPILK;TQLWAS(0.12)EPGT(0.879)PPLPTSLPSQNPILK 136.11 3.5455999999999997e-07 964550000.0 905160.0 1207800.0 848030.0 776690.0 838110.0 1086720.0 796100.0 1028410.0 1064190.0 1064960.0 True False 854948.9704082751 1149775.4750552394 902695.370695975 850506.3840796357 904064.4888064129 1079937.3773816833 876577.5571872692 1024842.6857426978 870959.9220467885 1055525.2829263438 0.809974885715679 1.0892922165422658 0.8552096148690419 0.8057659990120628 0.8565067113314233 1.023127910671793 0.8304657134853662 0.9709314426855021 0.8251435907173484 1.0 20.00952970520072 TQMAEVLPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 9 TQMAEVLPSPR 11 0 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR;TQMAEVLPS(1)PR 184.98 1.0613e-06 25610340000.0 7892740.0 8859180.0 6832640.0 6034590.0 6309470.0 7526350.0 6711700.0 7086160.0 8437280.0 7789660.0 True False 7454913.978412891 8433571.694899712 7273082.907010534 6608115.619234358 6805989.3930264525 7479375.257892221 7390184.1358796535 7061579.764882173 6905282.638520299 7720649.672663766 0.9655811744454931 1.0923396414112874 0.9420299087992664 0.8559014978534102 0.8815306588931474 0.9687494673374681 0.9571971853671615 0.9146354340988766 0.8943913959688641 1.0 22.88029082097482 -4.914134502868968 7.453951649489731 0.9207176973446981 1.0279542713926069 0.40781287985725867 0.04944198073613292 0.2020123152163912 14.955326837921726 0.01285739539071253 0.027023136606937063 1.2186121310578727e-05 4.914134502868968 0.10723657404790876 TQPDGTSVPGEPAS(ph)PISQR ddPTM_KYSE-520_SHP099_60min_R1 9 TQPDGTSVPGEPASPISQR 19 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR;TQPDGTSVPGEPAS(1)PISQR 308.39 3.9849e-50 18039300000.0 6878420.0 7883220.0 6202270.0 4889306.0 5164683.0 7578910.0 5816340.0 7608880.0 8517950.0 8238520.0 True False 6496860.33080968 7504498.278245539 6602078.248182866 5353984.172216551 5571114.169073471 7531607.211436078 6404312.409208132 7582486.571205947 6971305.000045519 8165533.122271568 0.7956443545724446 0.9190457213108291 0.8085299697304069 0.6556809080369179 0.6822719454628388 0.9223656433275066 0.7843103828383612 0.9285966338835421 0.853747685014126 1.0 22.961115650793783 -7.743370896971339 0.7684375943675764 0.9895020177216802 0.7874072844979161 0.3618377470793339 0.08429043544920431 0.7408230560989439 0.9638989095631233 0.08682228361112217 0.034623374189099686 1.805631418690252e-08 7.743370896971339 -0.20209473322376414 TQPSMVSNPGSCSDPQPS(ph)PEMKPHSYLDAIR ddPTM_KYSE-520_SHP099_60min_R1 1 TQPSMVSNPGSCSDPQPSPEMKPHSYLDAIR 31 1 C9J494;Q9H000-2;Q9H000 C9J494 MKRN2 Probable E3 ubiquitin-protein ligase makorin-2 1 TQPSMVSNPGSCSDPQPS(0.897)PEMKPHS(0.094)Y(0.008)LDAIR 57.882 0.031368 1370800000.0 259220.0 244710.0 250450.0 244760.0 253230.0 273640.0 303850.0 310010.0 326140.0 252290.0 True False 244840.5498577412 232953.76428280136 266594.40773416834 268021.9168102227 273157.7603183926 271932.1112583961 334566.12329022906 308934.6476668778 266921.19732034614 250054.90687864972 0.9791471517755937 0.9316104498435319 1.066143476494725 1.071852258993231 1.092391122126448 1.0874896023950584 1.337970637995087 1.23546724806645 1.0674503478145363 1.0 17.931885390060327 -5.370399995526882 0.9343835919043176 1.1687141450228844 0.9487250072435632 0.34841727815801826 0.09184148870530139 0.6830052020976014 1.1470019462328245 0.04002989690163551 0.10712825208311721 4.261868098137714e-06 5.370399995526882 -0.21998913777932116 TQPSSGVDSAVGTLPATS(ph)PQSTSVQAK ddPTM_KYSE-520_SHP099_60min_R1 2 TQPSSGVDSAVGTLPATSPQSTSVQAK 27 0 Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 Q13428 TCOF1 Treacle protein 1 TQPSSGVDSAVGTLPAT(0.468)S(0.503)PQS(0.014)T(0.014)SVQAK;TQPSSGVDSAVGTLPAT(0.203)S(0.793)PQS(0.002)T(0.002)SVQAK 215.07 1.8268e-22 1482570000.0 583690.0 909860.0 460160.0 435340.0 512720.0 776530.0 487290.0 669920.0 813890.0 826400.0 True False 551311.5521428316 866148.9598722977 489822.6498820322 476714.5827102566 553068.1470222565 771683.3882308216 536550.0286921045 667596.2038805026 666108.0924972607 819078.7389294716 0.6730873674775038 1.0574672723215188 0.5980165600711672 0.5820131326242435 0.6752319657876988 0.9421357820121234 0.6550652619714809 0.8150574201853228 0.81324060903822 1.0 19.64364262081205 -8.404724687558772 0.826342539790372 1.0015665305420218 0.7427011880206419 0.22443008960412902 0.14318027270030168 2.207285580838692 2.6510916825724675 0.14751664004043313 0.04994248992743563 3.9379963787649725e-09 8.404724687558772 -0.25886534252137994 TQQHYYDK ddPTM_KYSE-520_SHP099_60min_R1 4 TQQHYYDK 8 0 E9PK47;P06737-2;P06737 E9PK47 PYGL Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form 0 ;;; 90.10799999999999 0.007465100000000001 5450900000.0 12474600.0 11089800.0 6264800.0 5963740.0 9546100.0 10265200.0 6880300.0 8315400.0 7981100.0 8182500.0 False True 11782609.070501426 10557029.361870846 6668639.032034418 6530532.056536194 10297323.760120863 10201131.079117391 7575827.869257084 8286555.818228941 6531933.427158326 8110009.415888662 1.4528477670343536 1.3017283729890774 0.822272662096989 0.805243461708189 1.2697055246257718 1.257844541972038 0.9341330546934951 1.0217689515864679 0.8054162568987082 1.0 22.951272158766475 -4.596042128810401 5.65302924708036 1.002271538313883 1.4181491104742623 0.4948635060228047 0.15932227425399018 0.1611330074737404 8.850253089385395 0.04422165203298004 0.12307933529954519 2.5348827218394656e-05 4.596042128810401 0.41587757216037935 TQQHYYER ddPTM_KYSE-520_SHP099_60min_R1 2 TQQHYYER 8 0 P11216 P11216 PYGB Glycogen phosphorylase, brain form 0 ; 98.04799999999999 0.0051726 889080000.0 670260.0 590190.0 421860.0 488570.0 578020.0 574120.0 569580.0 496540.0 538820.0 615190.0 False True 633079.3416698157 561836.3865067494 449053.7705998657 535003.545906073 623506.8855160808 570536.7041209993 627158.7049651102 494817.6186333073 440983.8705468482 609739.8952105775 1.0382777093028788 0.921436158138735 0.7364677530978716 0.8774291302052757 1.0225784640526905 0.9357050581772427 1.028567607091737 0.8115224582154312 0.7232327653327517 1.0 19.217834418888554 -7.3010988861969075 24.858795396958524 0.8255331519981817 0.9298078070798833 0.12810689840837108 0.1055721252344284 984.2152185860344 616906.5655588788 0.0593983105305893 0.02853471321631231 4.9992069313316204e-08 7.3010988861969075 0.10427465508170164 TQQLHPVLQKPSVFGNDS(ph)DDDDETSVSESLQR ddPTM_KYSE-520_SHP099_60min_R1 4 TQQLHPVLQKPSVFGNDSDDDDETSVSESLQR 32 1 Q9H0G5 Q9H0G5 NSRP1 Nuclear speckle splicing regulatory protein 1 1 TQQLHPVLQKPS(0.013)VFGNDS(0.985)DDDDET(0.001)SVSESLQR;TQQLHPVLQKPSVFGNDS(1)DDDDETSVSESLQR;TQQLHPVLQKPSVFGNDS(1)DDDDETSVSESLQR;TQQLHPVLQKPSVFGNDS(1)DDDDETSVSESLQR 249.56 1.2691999999999998e-31 10916180000.0 1898818.0 1687967.0 1622935.0 2042140.0 1740199.0 1877619.0 1846220.0 1657152.0 1996957.0 1753717.0 True False 1793486.780340161 1606874.53162988 1727551.9868878117 2236224.3716082196 1877142.760922112 1865900.0833535935 2032853.9349708345 1651403.7264941863 1634359.947989353 1738180.4317511816 1.0318185313668842 0.9244578423949845 0.9938853040402359 1.2865317839041996 1.0799470104671058 1.0734789376691676 1.1695298703384753 0.9500761234726538 0.9402705945451062 1.0 20.729146418151718 -10.408399509542193 17.953003062702305 0.9999965488008586 1.0537616024621803 0.018425471341834587 0.1063370666363479 0.0 0.0 0.10984509311174322 0.02664134831503084 3.904815247279265e-11 10.408399509542193 0.05376505366132167 TQQS(ph)PISNGSPELGIK ddPTM_KYSE-520_SHP099_60min_R1 2 TQQSPISNGSPELGIK 16 0 Q15723-2;Q15723-3;Q15723-1;Q15723 Q15723-2 ELF2 ETS-related transcription factor Elf-2 1 TQQS(0.999)PIS(0.001)NGSPELGIK;TQQS(0.999)PIS(0.001)NGSPELGIK 245.75 2.9066999999999993e-23 696960000.0 903080.0 1019180.0 762250.0 631150.0 734160.0 1032010.0 693770.0 859240.0 1065060.0 1075550.0 True False 852984.3521546518 970217.0629796316 811385.8546431216 691134.3062378324 791934.2152010078 1025568.8427853282 763903.0421427106 856259.4969881227 871671.9519777035 1066021.463765239 0.8001568271823252 0.9101290133059594 0.7611346321088768 0.6483305728167168 0.7428876829588946 0.9620527143637143 0.7165925528784086 0.8032291338335468 0.817687055661071 1.0 20.023805055597556 TQRLS(ph)AETWDLLR ddPTM_KYSE-520_SHP099_60min_R1 5 TQRLSAETWDLLR 13 1 A0A0A0MSK4;A0A0A0MRC4;Q86YR5-4;Q86YR5 A0A0A0MSK4 GPSM1 G-protein-signaling modulator 1 1 TQRLS(1)AETWDLLR;TQRLS(1)AETWDLLR;T(0.002)QRLS(0.998)AETWDLLR;T(0.001)QRLS(0.999)AETWDLLR;T(0.001)QRLS(0.999)AETWDLLR 179.1 1.4937999999999998e-07 1766010000.0 666205.0 656878.0 658376.0 689628.0 751836.0 749462.0 723396.0 773505.0 948455.0 817602.0 True False 629249.2806032577 625320.5948860206 700815.9703988455 755170.0377757807 811001.2158383252 744784.3296591872 796523.9273446063 770821.8916924247 776239.4806048602 810358.6823647303 0.7765071125875123 0.7716590301238646 0.8648219432335504 0.9318960285241813 1.000792900091747 0.9190798418865721 0.9829276154853398 0.9512107520623679 0.9578961730127875 1.0 19.62820109197775 -5.048727778647329 1.8724179047148666 0.9646539125774639 0.767758391867184 0.909927028701544 0.024176678963770685 0.0901355237944786 0.6124336561571112 0.0068516674142810345 0.017880742967854864 8.938655945944044e-06 5.048727778647329 -0.19689552071027994 TQRRHKTS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 1 TQRRHKTSVK 10 3 A0A2R8Y7F9 A0A2R8Y7F9 1 T(0.005)QRRHKT(0.005)S(0.99)VK 48.284 0.054822 0.0 1234600.0 1074800.0 801960.0 852650.0 1029000.0 1308600.0 1297400.0 1469400.0 1257100.0 1397800.0 True False 1166114.2768859176 1023164.9946923095 853655.6247813686 933685.5996414309 1109976.4457908855 1300432.541999477 1428553.8534037974 1464302.9943605375 1028842.3289121473 1385416.5794719448 0.8417065986971118 0.7385251554317991 0.6161725198255833 0.673938520352707 0.8011860564090809 0.9386581345050311 1.0311366808879208 1.0569405737288495 0.7426230811416255 1.0 20.401888413304523 -6.144453870130473 2.8502488569251487 0.9646011711813404 0.7131677399200568 0.5753741047774021 0.09615216672931823 0.19755103363958135 3.1002956122811884 0.035034668476075205 0.03500648688013851 7.170445345360802e-07 6.144453870130473 -0.2514334312612836 TQS(ph)APLPQNAQALQHLVIQQQHQQFLEK ddPTM_KYSE-520_SHP099_60min_R1 2 TQSAPLPQNAQALQHLVIQQQHQQFLEK 28 0 P56524-2;P56524 P56524-2 HDAC4 Histone deacetylase 4 1 T(0.009)QS(0.991)APLPQNAQALQHLVIQQQHQQFLEK;T(0.009)QS(0.991)APLPQNAQALQHLVIQQQHQQFLEK 339.74 2.1880999999999996e-78 6458800000.0 1226100.0 1145490.0 1381490.0 1106500.0 1336600.0 1188540.0 990080.0 1444600.0 1453450.0 1274570.0 True False 1158085.788830247 1090458.9409844554 1470543.0558621523 1211661.4273186435 1441782.815786293 1181121.8809934738 1090166.9486496302 1439589.0197721745 1189540.1184928487 1263278.3014004556 0.9167305316226888 0.8631977132636452 1.1640689579104821 0.9591405361553427 1.1413026046500991 0.9349656997069417 0.862966574697819 1.1395660150073526 0.9416295025206547 1.0 20.26874107054085 -4.697750859638366 24.99999755624887 1.0167482036434865 0.8899630951700201 0.21921331503106967 0.09659902754081731 94.16557813010118 36961.12054414147 0.023860222601571036 0.06312819815295072 2.0056222564773132e-05 4.697750859638366 -0.12678510847346636 TQS(ph)APLPQSTLAQLVIQQQHQQFLEK ddPTM_KYSE-520_SHP099_60min_R1 1 TQSAPLPQSTLAQLVIQQQHQQFLEK 26 0 Q9UKV0-10;Q9UKV0-3;Q9UKV0-4;Q9UKV0-2;Q9UKV0;Q9UKV0-5;Q9UKV0-7;B7Z3P7;B5MCF1;Q9UKV0-11;Q9UKV0-9;Q9UKV0-8;Q9UKV0-6 Q9UKV0-10 HDAC9 Histone deacetylase 9 1 T(0.129)QS(0.871)APLPQSTLAQLVIQQQHQQFLEK 217.29 9.6489e-22 1335000000.0 398920.0 417820.0 352620.0 306960.0 350690.0 407980.0 285800.0 381720.0 520640.0 400500.0 True False 376791.11237269593 397747.30003939365 375350.44941194827 336133.38610911067 378287.3078468466 405433.6454875029 314691.4531392055 380395.90241411765 426104.90026634285 396951.8815842852 0.9492110501375505 1.002003815807432 0.9455817362897416 0.8467862270045422 0.9529802613280333 1.0213672344097877 0.7927697732108792 0.9582922264933208 1.073442197995647 1.0 18.59860460924306 -7.611327633012333 6.3261463259436495 1.0338342074305935 0.9306582158019864 0.28970697131719503 0.0657309381232779 0.27600974627831965 15.933248211553435 0.04633509327206766 0.01700181355852721 2.4472163581916596e-08 7.611327633012333 -0.10317599162860713 TQS(ph)GNFYTDTLGMAEFR ddPTM_KYSE-520_SHP099_60min_R1 1 TQSGNFYTDTLGMAEFR 17 0 H0YDJ2;E9PP16;Q8ND30-3;Q8ND30-2;Q8ND30 H0YDJ2 PPFIBP2 Liprin-beta-2 1 T(0.016)QS(0.981)GNFYT(0.002)DTLGMAEFR 91.27600000000001 0.0016184 72090000.0 55091.0 75849.0 48529.0 49031.0 48292.0 57869.0 50189.0 59268.0 65078.0 52724.0 True False 52034.992408814214 72205.10018832995 51657.25698914535 53690.891498292316 52092.30565610634 57507.81810558441 55262.59391743733 59062.413141255194 53261.475682877004 52256.90637865131 0.9957534039954621 1.3817331562862694 0.9885249734233994 1.0274410641389755 0.9968501632807676 1.1004826364745977 1.0575175177230534 1.1302317192925941 1.0192236658049871 1.0 15.673334098844096 TQS(ph)LPVTEK ddPTM_KYSE-520_SHP099_60min_R1 11 TQSLPVTEK 9 0 Q9NQW6;Q9NQW6-2 Q9NQW6 ANLN Actin-binding protein anillin 1 T(0.061)QS(0.939)LPVTEK;T(0.004)QS(0.984)LPVT(0.012)EK;TQS(1)LPVTEK;TQS(0.998)LPVT(0.002)EK;TQS(1)LPVTEK;TQS(1)LPVTEK;TQS(0.998)LPVT(0.002)EK;TQS(1)LPVTEK;T(0.004)QS(0.996)LPVT(0.001)EK;TQS(0.998)LPVT(0.002)EK;TQS(0.983)LPVT(0.017)EK 194.48 3.7363e-06 35128040000.0 38692660.0 29159920.0 26794250.0 21181510.0 20258690.0 30300650.0 26184480.0 30032900.0 32699230.0 29821940.0 True False 36546301.017894566 27759033.67326772 28521450.227315795 23194594.34194681 21852933.64682152 30111532.403894592 28831462.774298295 29928722.87963153 26761874.1125081 29557740.812718246 1.2364375629875355 0.9391459871426787 0.9649401288153744 0.7847214876438232 0.7393303089462959 1.0187359241927603 0.9754284996603176 1.012551096826509 0.9054100001104575 1.0 24.8170326683761 -4.248800700449556 3.856535428979752 0.920440422586457 1.2715435005881295 0.5158688306693401 0.08998924361759493 0.24068002191450552 6.976374422290372 0.024737713852058703 0.24272427888141304 5.6389637085693924e-05 4.248800700449556 0.3511030780016725 TQS(ph)PEFEAQSSK ddPTM_KYSE-520_SHP099_60min_R1 2 TQSPEFEAQSSK 12 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 TQS(1)PEFEAQSSK;T(0.005)QS(0.995)PEFEAQSSK 272.96 6.4464e-22 1158950000.0 2003030.0 1780880.0 1552970.0 1430570.0 1516900.0 1797930.0 1528600.0 1920780.0 2259510.0 1807740.0 True False 1891917.9329586874 1695323.851644623 1653076.9310398523 1566530.942683445 1636271.400019625 1786708.4519617292 1683125.8056983547 1914117.26249342 1849239.9416118718 1791724.830000438 1.0559199165411046 0.9461965494133431 0.9226176382449576 0.874314468635824 0.9132381114678334 0.997200251983611 0.9393885587319473 1.0683098377851648 1.032100415559581 1.0 20.772917657123458 -7.2520917055249985 24.830628868109795 1.0376538455200772 0.9461612852663783 0.3783915897522211 0.04887376837208365 599.7084926499001 1593038.1260540574 0.024550611840050418 0.013922358756302053 5.596394156845158e-08 7.2520917055249985 -0.0914925602536989 TQS(ph)PGGCSAEAVLAR ddPTM_KYSE-520_SHP099_60min_R1 3 TQSPGGCSAEAVLAR 15 0 K7ESM2;K7ELS4;K7EJA3;K7ERG7;Q96MH2 K7ESM2 HEXIM2 Protein HEXIM2 1 TQS(1)PGGCSAEAVLAR;TQS(1)PGGCSAEAVLAR;T(0.044)QS(0.956)PGGCSAEAVLAR 258.68 6.2965e-25 1869540000.0 1334290.0 1409510.0 1194540.0 957280.0 1036460.0 1379720.0 964360.0 1262000.0 1505940.0 1249630.0 True False 1260274.2738588296 1341795.0238823565 1271541.959731576 1048259.6033832734 1118023.50534929 1371108.6556988517 1061846.9200466205 1257622.4165530147 1232499.2576580683 1238559.2503974282 1.0175324866004056 1.083351501716048 1.0266299002841925 0.846354022261679 0.9026806791766638 1.10701902654951 0.8573242819880403 1.0153914042864478 0.9951072241901909 1.0 20.240231455437637 -5.017887024881066 24.307573442741553 0.9587318899873459 1.051579201157368 0.20387664685454765 0.07513207136497127 746.3277376402999 1014225.8373413591 0.020215884029635457 0.03599420291647166 9.596502374952608e-06 5.017887024881066 0.09284731117002198 TQS(ph)PGTDLLPYLDWDYVR ddPTM_KYSE-520_SHP099_60min_R1 2 TQSPGTDLLPYLDWDYVR 18 0 C9JXU1;A6NN40;Q2M3G4-2;Q2M3G4 C9JXU1 SHROOM1 Protein Shroom1 1 T(0.132)QS(0.779)PGT(0.089)DLLPYLDWDYVR;T(0.148)QS(0.704)PGT(0.148)DLLPYLDWDYVR 171.71 1.5108e-08 136366000.0 109819.0 111711.0 90176.0 91677.0 88847.0 108501.0 89264.0 111746.0 148807.0 123292.0 True False 103727.12115125095 106344.23587837034 95988.88924670136 100389.95451630495 95838.75342972076 107823.80501259769 98287.6762526873 111358.37920771241 121787.39991920275 122199.72879972449 0.848832662478747 0.8702493608039015 0.7855082019373335 0.8215235459387639 0.7842795918703941 0.8823571547307787 0.804319921313188 0.9112817213385132 0.99662577908665 1.0 16.898881557795363 -7.5565678069419135 2.6157347544850866 1.0015404702827941 0.8281462137376767 0.8254803832947915 0.031369873850623446 0.1118274443110967 1.4497431290833762 0.0259568597013287 0.008519665907409029 2.7760813792015507e-08 7.5565678069419135 -0.17339425654511742 TQSAS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 10 TQSASPPPK 9 0 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 T(0.003)QS(0.08)AS(0.917)PPPK;TQSAS(1)PPPK;TQS(0.005)AS(0.995)PPPK;TQSAS(1)PPPK;TQS(0.004)AS(0.996)PPPK;TQS(0.01)AS(0.99)PPPK;TQSAS(1)PPPK;TQS(0.001)AS(0.999)PPPK;TQS(0.001)AS(0.999)PPPK;TQS(0.005)AS(0.995)PPPK 152.96 0.00023519 29642410000.0 10439220.0 8602580.0 7622980.0 6888400.0 6929780.0 9322280.0 7795250.0 10360090.0 9653160.0 10186490.0 True False 9860135.656530855 8189299.144064171 8114369.487999248 7543071.464927028 7475114.260945345 9264096.192595815 8583269.944308568 10324153.265853185 7900389.480360819 10096245.623569302 0.9766140825172421 0.8111232085069883 0.8037016719419504 0.7471164773683807 0.7403855393033402 0.9175783294107994 0.8501447235268573 1.0225735041302721 0.7825076543222819 1.0 23.26731557825744 -6.288947025245617 24.177240705640333 0.9119457031268895 0.8110424586839025 0.23911522847571387 0.08783174665571669 732.1426065497955 643497.7918684569 0.03051630063735847 0.026920696920252483 5.141063578755307e-07 6.288947025245617 -0.10090324444298704 TQSAS(ph)PPPKER ddPTM_KYSE-520_SHP099_60min_R1 11 TQSASPPPKER 11 1 Q9UN81 Q9UN81 L1RE1 LINE-1 retrotransposable element ORF1 protein 1 TQS(0.002)AS(0.998)PPPKER;TQS(0.027)AS(0.973)PPPKER;TQS(0.006)AS(0.994)PPPKER;TQS(0.016)AS(0.984)PPPKER;TQS(0.064)AS(0.936)PPPKER;TQS(0.009)AS(0.991)PPPKER;T(0.002)QS(0.254)AS(0.743)PPPKER;TQS(0.002)AS(0.998)PPPKER;TQS(0.02)AS(0.98)PPPKER;TQS(0.002)AS(0.998)PPPKER;TQS(0.191)AS(0.809)PPPKER 141.38 0.00014209 56102790000.0 32454720.0 25927250.0 29047810.0 23735920.0 23951100.0 25398570.0 22500020.0 26014000.0 31912750.0 25191600.0 True False 30654391.98471969 24681665.992404327 30920278.31073932 25991774.700335417 25835915.306882482 25240048.103508852 24774541.600633945 25923763.505713228 26118199.054960687 24968422.0227682 1.2277264440967302 0.9885152521812397 1.2383753479712791 1.040985877146503 1.0347436166900428 1.0108787844299076 0.9922349749632773 1.0382619887662052 1.0460492469705946 1.0 24.573601311594487 -5.492478260388779 22.987806204464146 1.0219822995967736 1.1359773864097618 0.441826273710484 0.06568624168470875 244.58117522056878 184943.1276438711 0.017215053101991867 0.025479957824138238 3.2175235892233016e-06 5.492478260388779 0.1139950868129882 TQSRPGGPPNPPGPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 TQSRPGGPPNPPGPSPK 17 1 M0QXA7;A0A669KBH9;A0A669KAV7;O95785-3;B9EGQ5;A0A669KBG4;A0A2R8YFV2;O95785-4;O95785;O95785-2 M0QXA7 WIZ Protein Wiz 1 TQSRPGGPPNPPGPS(1)PK;TQSRPGGPPNPPGPS(1)PK 109.44 0.00011527 4191300000.0 1567830.0 1373530.0 1315930.0 1105160.0 1171740.0 1211360.0 1135020.0 1190960.0 1571080.0 1250110.0 True False 1480859.3445083813 1307543.5570894368 1400756.9533624453 1210194.074121531 1263949.2717113802 1203799.452908824 1249758.8983277136 1186828.8377321528 1285811.475703839 1239034.9979708632 1.195171522139042 1.0552918676476195 1.1305225079650132 0.9767230757028137 1.0201078046877758 0.9715621067042144 1.0086550423308565 0.9578654676226198 1.0377523458252433 1.0 20.24078550796161 -3.8039573926989836 0.6281626334359067 0.9900120303609421 1.4303438261116963 0.7043897640352954 0.03871689868373893 2.941756117336387 0.5855207819555448 0.016753152237800464 1.0580680358363561 0.00015705168753745612 3.8039573926989836 0.4403317957507542 TQSSSCERDS(ph)PSTSR ddPTM_KYSE-520_SHP099_60min_R1 4 TQSSSCERDSPSTSR 15 1 Q5JS79;A0A2U3TZM1;A0A2R8YE77;A0A2R8YEK3;O14936-6;O14936-2;O14936 Q5JS79 CASK Peripheral plasma membrane protein CASK 1 TQSSSCERDS(0.995)PS(0.003)TSR;TQSSSCERDS(0.995)PS(0.004)T(0.001)SR;TQSSSCERDS(0.973)PS(0.024)T(0.003)SR;TQSSSCERDS(0.989)PS(0.007)T(0.002)S(0.001)R 179.87 5.3191999999999996e-09 868138000.0 427106.0 451252.0 385924.0 439468.0 422743.0 465378.0 413876.0 458681.0 559501.0 385378.0 True False 403413.5787652978 429573.17657693924 410801.27854023245 481234.9065891277 456010.4690213572 462473.4032787961 455714.62512051006 457089.94266794965 457909.722272432 381963.85073954664 1.0561564346579417 1.1246435382437707 1.0754977931677348 1.2598964683631069 1.1938576599289272 1.2107779371879548 1.1930831261601573 1.1966837746109904 1.198829997618469 1.0 18.54307658173822 -5.239156598797353 24.71375359979865 1.1897412273747503 1.089353666963757 0.28473709683496906 0.06638100153708489 773.1777640285031 857526.9168378555 0.016544141544153 0.02862915050738895 5.765585292457514e-06 5.239156598797353 -0.10038756041099339 TQT(ph)PPLGQTPQLGLK ddPTM_KYSE-520_SHP099_60min_R1 8 TQTPPLGQTPQLGLK 15 0 H0Y3P2;D3DQV9;P78344-2;P78344;E9PKF8 H0Y3P2;E9PKF8 EIF4G2 Eukaryotic translation initiation factor 4 gamma 2 1 TQT(1)PPLGQTPQLGLK;T(0.001)QT(0.999)PPLGQTPQLGLK;T(0.033)QT(0.967)PPLGQTPQLGLK;T(0.144)QT(0.856)PPLGQTPQLGLK;TQT(1)PPLGQTPQLGLK;T(0.018)QT(0.982)PPLGQTPQLGLK;TQT(1)PPLGQTPQLGLK;T(0.12)QT(0.878)PPLGQT(0.002)PQLGLK 266.27 1.9794999999999998e-24 18152770000.0 7236760.0 9496230.0 6601710.0 5384580.0 5939410.0 7843660.0 5367630.0 6739950.0 7700190.0 6986620.0 True False 6835322.4966766 9040016.856668161 7027266.7897094665 5896328.864266992 6406807.776379828 7794704.808482053 5910242.423420557 6716570.68656616 6302029.6019934965 6924723.982308114 0.9870895235882434 1.305469630235715 1.0148082158456189 0.8514893704545401 0.9252076750999024 1.125634007708703 0.8534986287569811 0.969940564234219 0.9100766497111609 1.0 22.723325136183988 -4.987708501561145 24.840156891751597 0.948004576928894 1.1497445179883234 0.36835976580904506 0.10278553874138209 197.3716377242327 398866.39163014025 0.02553973039850511 0.053106856744830386 1.0287065342419053e-05 4.987708501561145 0.2017399410594295 TQT(ph)PPVS(ph)PAPQPTEER ddPTM_KYSE-520_SHP099_60min_R1 12 TQTPPVSPAPQPTEER 16 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 TQT(1)PPVS(1)PAPQPTEER;TQT(1)PPVS(1)PAPQPTEER;TQT(1)PPVS(1)PAPQPTEER;TQT(1)PPVS(1)PAPQPTEER;TQT(1)PPVS(1)PAPQPTEER;T(0.001)QT(0.999)PPVS(1)PAPQPTEER;TQT(1)PPVS(1)PAPQPTEER;TQT(1)PPVS(1)PAPQPTEER;T(0.147)QT(0.853)PPVS(1)PAPQPTEER;T(0.073)QT(0.927)PPVS(1)PAPQPTEER;T(0.001)QT(0.999)PPVS(1)PAPQPTEER;T(0.001)QT(0.999)PPVS(1)PAPQPTEER 300.28 1.8255999999999998e-37 34122450000.0 3939540.0 3439173.0 3228066.0 3928021.0 4069310.0 4130610.0 4812770.0 5237350.0 5082200.0 4760050.0 True False 3721005.862921711 3273949.96677608 3436152.2994482135 4301338.93483742 4389541.545793297 4104829.3308180138 5299291.759708801 5219182.855256674 4159400.591836215 4717879.660262858 0.7887030045006266 0.6939452047392135 0.7283255502232898 0.911710184358066 0.930405576633282 0.8700580825305138 1.123235890127293 1.1062560368413226 0.8816249865102479 1.0 22.169707189309737 -5.641053680707012 1.0206954986561625 1.0195769164930224 0.7186088621006163 0.6498205578794024 0.08132592523879853 0.3365472200235182 0.7366836177721819 0.03662979007594933 0.06536605865359678 2.2853163107754418e-06 5.641053680707012 -0.30096805439240615 TQT(ph)PPVS(ph)PAPQPTEERLPSSPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 3 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 T(0.136)QT(0.862)PPVS(0.553)PAPQPT(0.147)EERLPS(0.185)S(0.116)PVYEDAASFK;T(0.154)QT(0.846)PPVS(0.892)PAPQPT(0.079)EERLPS(0.015)S(0.014)PVYEDAASFK;T(0.005)QT(0.995)PPVS(0.76)PAPQPT(0.239)EERLPSSPVYEDAASFK 180.31 6.381399999999999e-11 11706700000.0 4843750.0 4626820.0 4463630.0 4228860.0 4541990.0 4338080.0 3611230.0 3984550.0 5712710.0 4076280.0 True False 4575057.531723766 4404540.622201593 4751362.731860519 4630769.582946876 4899418.772611994 4311004.433590925 3976288.3706084453 3970728.5260509606 4675425.869699868 4040167.330497856 1.1323930811449825 1.0901876734048133 1.176031174747167 1.1461826216926125 1.2126771917657817 1.0670361103731056 0.9841890311306638 0.9828128889804328 1.1572357002163403 1.0 21.945983615241897 -6.471582083427596 6.726900300148414 1.028932492320256 1.148711108352782 0.5241680150400093 0.05475170304550755 0.19015019734677394 20.3036799660924 0.019613612278126146 0.017041882313922126 3.3761203256095395e-07 6.471582083427596 0.11977861603252582 TQT(ph)PPVSPAPQPT(ph)EERLPSSPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 T(0.058)QT(0.438)PPVS(0.509)PAPQPT(0.348)EERLPS(0.323)S(0.323)PVYEDAASFK 183.27 2.2425e-15 697690000.0 222090.0 191540.0 184110.0 145770.0 182750.0 174980.0 163150.0 168680.0 242940.0 174160.0 True False 209770.2249745614 182338.13089259845 195978.02518641544 159623.93697265134 197131.38529473683 173887.88491446458 179642.79419055753 168094.8884502078 198828.22001902547 172617.07789442965 1.215234480465798 1.0563157082528885 1.1353339285830863 0.9247285316130497 1.1420155392463531 1.0073620005363093 1.0407011657353202 0.973802189798465 1.1518455905077145 1.0 17.397215679247832 TQT(ph)PPVSPAPQPTEER ddPTM_KYSE-520_SHP099_60min_R1 6 TQTPPVSPAPQPTEER 16 0 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 TQT(1)PPVSPAPQPTEER;T(0.204)QT(0.796)PPVSPAPQPTEER;T(0.022)QT(0.978)PPVSPAPQPTEER;TQT(1)PPVSPAPQPTEER;TQT(1)PPVSPAPQPTEER;TQT(1)PPVSPAPQPTEER 229.02 6.503300000000001e-18 6567250000.0 2331360.0 2467410.0 2022278.0 1720335.0 1830059.0 2582217.0 1898504.0 2255585.0 2141082.0 2330184.0 True False 2202034.813349061 2348871.919942086 2152637.2756392057 1883835.1211624232 1974074.2316886503 2566100.425878241 2090423.3119334998 2247760.9020924983 1752315.481084939 2309540.3826157185 0.953451530843163 1.0170300279754458 0.9320630597509584 0.8156753332145014 0.8547476573901128 1.1110870566255049 0.9051252481525986 0.9732503137904648 0.7587290935784883 1.0 21.139174341443184 TQT(ph)PPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 4 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 T(0.104)QT(0.896)PPVS(0.007)PAPQPT(0.005)EERLPS(0.729)S(0.259)PVYEDAASFK;T(0.032)QT(0.921)PPVS(0.056)PAPQPT(0.078)EERLPS(0.773)S(0.141)PVYEDAASFK;T(0.031)QT(0.956)PPVS(0.014)PAPQPT(0.003)EERLPS(0.883)S(0.114)PVYEDAASFK;T(0.079)QT(0.46)PPVS(0.461)PAPQPT(0.001)EERLPS(0.599)S(0.4)PVY(0.001)EDAASFK 178.36 1.0736e-10 15365970000.0 2917180.0 2917740.0 2782120.0 2519800.0 2571880.0 2489600.0 2400660.0 2634320.0 3886090.0 2587910.0 True False 2755358.2101458455 2777567.390782971 2961459.9067493887 2759281.0343945073 2774272.3240045286 2474061.4829297694 2643342.1409837827 2625182.158774907 3180474.0163568584 2564983.1307635107 1.0742207919806734 1.0828793988817311 1.154572859069003 1.0757501682177382 1.0815947640087284 0.9645527306814384 1.0305495226383603 1.023469560984394 1.2399590384090116 1.0 21.29051790695227 -6.013557418899158 23.683944910198104 1.0486532923911875 1.0973167092434037 0.08151625630901227 0.07175314789498449 846.3174301568844 1478464.707518943 0.02336919262723399 0.024407090313200448 9.692651124451737e-07 6.013557418899158 0.0486634168522162 TQT(ph)PPVSPAPQPTEERLPSS(ph)PVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 2 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 2 T(0.2)QT(0.795)PPVS(0.031)PAPQPT(0.039)EERLPS(0.2)S(0.717)PVY(0.017)EDAASFK;T(0.009)QT(0.991)PPVS(0.132)PAPQPT(0.242)EERLPS(0.1)S(0.526)PVYEDAASFK 211.36 2.6354e-22 11266500000.0 4704300.0 4935200.0 4492100.0 4078300.0 4381800.0 4146200.0 4108300.0 4052800.0 5602200.0 4160900.0 True False 4443343.101210445 4698105.584113779 4781667.953614131 4465900.40581439 4726622.730968418 4120322.0278451974 4523607.0571441455 4038741.7827306283 4584981.699969474 4124037.663131215 1.077425441802778 1.1392004554455735 1.1594627266288358 1.0828951553327018 1.1461153163619955 0.999099029739899 1.0968879109871061 0.9793173856865737 1.1117700841966325 1.0 21.975626077627798 -6.254269965642694 24.91582335556008 1.039839282535695 1.122047536069158 0.4520934308179355 0.0459737353741569 490.7486487630488 1705496.031319258 0.014244869680462508 0.013964634300693033 5.568394993881441e-07 6.254269965642694 0.08220825353346295 TQT(ph)PPVSPAPQPTEERLPSSPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 2 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 T(0.141)QT(0.68)PPVS(0.168)PAPQPT(0.011)EERLPSSPVYEDAASFK;TQT(0.997)PPVS(0.003)PAPQPTEERLPSSPVYEDAASFK 212.36 8.087e-22 3204500000.0 733220.0 887910.0 666530.0 516160.0 528220.0 561300.0 369810.0 496380.0 657880.0 514450.0 True False 692546.8249621675 845253.4708199177 709495.5902857061 565215.691210837 569787.9088393212 557796.7184963363 407194.00379779376 494658.17363596335 538425.575805205 509892.37323604414 1.35822158030508 1.6577095779164068 1.391461468197446 1.1084999911327995 1.1174670160746838 1.0939499152659728 0.7985881436380923 0.970122715302846 1.055959265262342 1.0 18.959833233315567 -5.348595778757244 1.4812717421159334 0.9845932048781133 1.5266798497272691 0.7923113910056034 0.10709824559500986 0.17850327847189318 0.7680357189712183 0.036708381287864404 0.07663743537816105 4.4813020902683734e-06 5.348595778757244 0.5420866448491558 TQTGDSS(ph)SISSFSYR ddPTM_KYSE-520_SHP099_60min_R1 1 TQTGDSSSISSFSYR 15 0 A0A087WXA6;A0A087WT45;Q4V328-4;Q4V328;Q4V328-3;Q4V328-2 A0A087WXA6 GRIPAP1 GRIP1-associated protein 1 1 TQTGDS(0.001)S(0.499)S(0.499)IS(0.001)SFSYR 282.52 6.2192e-33 396960000.0 494520.0 481690.0 516610.0 481050.0 379680.0 406460.0 384720.0 436950.0 545450.0 410630.0 True False 467087.9897988203 458548.8893685697 549911.5072052252 526768.8473670442 409558.65591631 403923.1323713182 423611.2521053714 435434.32243489655 446410.02967554727 406992.13766530564 1.147658508781649 1.126677512737758 1.351160025743423 1.2942973551991273 1.0063060634677787 0.9924593007825835 1.040833993834379 1.0698838678622844 1.0968517284789845 1.0 18.634641398999992 -5.76742526568617 24.981838035506915 1.0361090802349737 1.2312298458610202 0.6698476496696713 0.06725048237997373 94.52236106595598 394484.5907705351 0.022807648432788652 0.026532884361072387 1.708341669818267e-06 5.76742526568617 0.19512076562604652 TQTPPVS(ph)PAPQPTEERLPSSPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 1 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 T(0.002)QT(0.009)PPVS(0.818)PAPQPT(0.17)EERLPSSPVYEDAASFK 61.43600000000001 0.023406 279630000.0 289170.0 361710.0 272240.0 216720.0 232130.0 280600.0 171020.0 227210.0 291710.0 229450.0 True False 273129.1636538967 344332.9086622214 289789.0259994011 237317.00364075587 250397.31036096974 278848.671316715 188308.37059435569 226421.8615412129 238742.8174106772 227417.251509399 1.2010045932799802 1.5141019706149703 1.2742614031083053 1.043531227581245 1.1010480018514381 1.2261544340456088 0.8280302806604495 0.9956230674604517 1.049800821292619 1.0 17.794982173359262 -5.180317458448715 3.488801624288894 1.0352129357388709 1.3646597096784812 0.5753884976536412 0.11712560119998144 0.1700395422425936 3.9796574572182584 0.03335827380723173 0.061228288968449944 6.602106740232572e-06 5.180317458448715 0.3294467739396103 TQTPPVSPAPQPTEERLPS(ph)SPVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 5 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 TQTPPVSPAPQPT(0.001)EERLPS(0.478)S(0.478)PVY(0.043)EDAASFK;TQTPPVS(0.002)PAPQPT(0.034)EERLPS(0.447)S(0.447)PVY(0.069)EDAASFK;TQTPPVSPAPQPTEERLPS(0.5)S(0.5)PVYEDAASFK;TQTPPVSPAPQPT(0.007)EERLPS(0.457)S(0.457)PVY(0.078)EDAASFK;TQTPPVSPAPQPTEERLPS(0.684)S(0.316)PVYEDAASFK 275.4 8.0691e-42 11870480000.0 4086020.0 4844230.0 3871650.0 2999260.0 3229480.0 4216370.0 3073730.0 3355340.0 4676640.0 4017640.0 True False 3859360.3253210704 4611505.919462535 4121222.7538590296 3284308.7686395966 3483621.7027723473 4190054.07084696 3384452.625113958 3343701.1086822427 3827480.0645005926 3982046.835276624 0.9691900886577516 1.1580742543280969 1.0349508492339812 0.8247790406542124 0.8748319261117751 1.0522362604396354 0.8499278800870376 0.8396940686535052 0.961184090200362 1.0 21.925078758896895 -5.0929264557403195 6.380024591356967 0.9098771932495696 1.0714896599830648 0.3830679536453939 0.08126609071053918 0.21517217011697753 12.245829186247352 0.02181739117134312 0.03842260371181067 8.073717405506009e-06 5.0929264557403195 0.16161246673349516 TQTPPVSPAPQPTEERLPSS(ph)PVYEDAASFK ddPTM_KYSE-520_SHP099_60min_R1 8 TQTPPVSPAPQPTEERLPSSPVYEDAASFK 30 1 Q14247-3;Q14247;Q14247-2;H0YEV2;H0YCD9 Q14247-3 CTTN Src substrate cortactin 1 TQTPPVSPAPQPTEERLPS(0.191)S(0.809)PVYEDAASFK;TQTPPVSPAPQPTEERLPS(0.145)S(0.678)PVY(0.176)EDAASFK;TQTPPVSPAPQPTEERLPS(0.201)S(0.798)PVYEDAASFK;TQTPPVSPAPQPTEERLPS(0.242)S(0.758)PVYEDAASFK;TQTPPVSPAPQPTEERLPS(0.211)S(0.753)PVY(0.035)EDAASFK;TQTPPVSPAPQPTEERLPS(0.029)S(0.971)PVYEDAASFK;TQTPPVSPAPQPTEERLPS(0.025)S(0.975)PVYEDAASFK;TQTPPVSPAPQPTEERLPS(0.144)S(0.848)PVY(0.008)EDAASFK 395.02 1.2429e-109 88842710000.0 9659020.0 11807560.0 9112450.0 7238680.0 7089750.0 10284490.0 7225100.0 8033510.0 11835590.0 8949490.0 True False 9123214.905820994 11240307.0940911 9699853.107435519 7926641.970811493 7647672.9898405485 10220300.683072133 7955483.618180797 8005643.628845336 9686545.206944004 8870204.481197862 1.0285236293209967 1.2671981934483174 1.0935320744855725 0.8936256190726567 0.8621755006946336 1.1522057585860692 0.8968771390833216 0.902532026833752 1.0920317820718266 1.0 23.08053593209288 -5.060650954962738 5.976423079150626 0.9681767044641858 1.1558565581522122 0.34083877843222343 0.10252880347369918 0.21187323741132258 15.624964296920268 0.027321884307266682 0.0489037098509232 8.696590986345534e-06 5.060650954962738 0.18767985368802642 TQTPQLHFLDT(ph)DDEVS(ph)PTSWGDSR ddPTM_KYSE-520_SHP099_60min_R1 6 TQTPQLHFLDTDDEVSPTSWGDSR 24 0 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 2 TQTPQLHFLDT(1)DDEVS(0.78)PT(0.174)S(0.047)WGDSR;TQTPQLHFLDT(1)DDEVS(1)PTSWGDSR;TQTPQLHFLDT(1)DDEVS(0.997)PT(0.003)SWGDSR;TQTPQLHFLDT(1)DDEVS(0.999)PT(0.001)SWGDSR;TQTPQLHFLDT(1)DDEVS(0.994)PT(0.005)S(0.001)WGDSR;TQTPQLHFLDT(1)DDEVS(0.995)PT(0.005)S(0.001)WGDSR 207.39 1.0041e-16 1504176000.0 673139.0 722699.0 643738.0 820980.0 782435.0 777920.0 770811.0 895236.0 1125310.0 886828.0 True False 635798.6378006719 687979.4552466852 685234.3814972166 899005.6923633624 844008.1830538294 773064.7127252279 848732.0982704133 892130.6352656536 920982.0707566044 878971.393861743 0.7233439475286032 0.7827097218989817 0.7795866694667425 1.0227928902368473 0.9602225839747713 0.8795106622626064 0.9655969513882882 1.0149711827891186 1.0477952720512191 1.0 19.745456688036025 -5.228155207151932 7.963165699533295 0.9788604971778953 0.7631835419366347 0.8313468432807124 0.04588478785307792 0.1222933317979492 26.1628079803343 0.013711579413700532 0.02352673777332235 5.913502610266806e-06 5.228155207151932 -0.21567695524126052 TQTPQLHFLDT(ph)DDEVSPTSWGDSR ddPTM_KYSE-520_SHP099_60min_R1 8 TQTPQLHFLDTDDEVSPTSWGDSR 24 0 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 TQTPQLHFLDT(1)DDEVSPTSWGDSR;TQTPQLHFLDT(1)DDEVSPTSWGDSR;TQTPQLHFLDT(1)DDEVSPTSWGDSR;TQTPQLHFLDT(1)DDEVSPTSWGDSR;TQTPQLHFLDT(1)DDEVSPTSWGDSR;TQTPQLHFLDT(1)DDEVSPTSWGDSR;TQTPQLHFLDT(1)DDEVSPTSWGDSR;TQTPQLHFLDT(1)DDEVSPTSWGDSR 242.11 2.2973e-28 7955670000.0 1348046.0 1400700.0 1329320.0 1456203.0 1337520.0 1089768.0 1039436.0 1178362.0 1383272.0 1152513.0 True False 1273267.2011169225 1333408.2695064382 1415010.0941872036 1594600.0952966053 1442775.2145522118 1082966.3536830859 1144512.334797772 1174274.5372537586 1132104.6742494332 1142302.6314615468 1.1146496261571333 1.1672986061499102 1.238734863436964 1.395952395956889 1.26304113709886 0.9480555536298279 1.0019344289992558 1.0279889977591181 0.9910724558175398 1.0 20.123513485408974 -6.257717694793361 24.983868242337774 0.9960673547374506 1.24116755015372 0.7480629953888525 0.07021758849675142 180.96781839887709 1214848.4830881343 0.026482536180254257 0.02551736212646477 5.524364238135686e-07 6.257717694793361 0.24510019541626948 TQTPQLHFLDTDDEVS(ph)PTSWGDSR ddPTM_KYSE-520_SHP099_60min_R1 2 TQTPQLHFLDTDDEVSPTSWGDSR 24 0 Q86US8 Q86US8 SMG6 Telomerase-binding protein EST1A 1 TQTPQLHFLDTDDEVS(0.999)PT(0.001)SWGDSR;TQTPQLHFLDTDDEVS(0.991)PT(0.009)SWGDSR 243.16 1.064e-28 404230000.0 200641.0 238390.0 232080.0 203932.0 212357.0 252390.0 222090.0 228890.0 290220.0 243390.0 True False 189511.04376208273 226937.38656931478 247040.24814112938 223313.6359656084 229068.28775395057 250814.74039068335 244541.0245895249 228096.03401332774 237523.36385083362 241233.7539545548 0.7855909078038228 0.9407364551980016 1.0240699905854322 0.9257147157262151 0.949569801069812 1.0397166079749083 1.01370981705816 0.9455394623436403 0.9846191088813377 1.0 17.88007226084486 -4.294488513730779 3.18995798318439 0.9830938566030302 0.7638903535123278 0.7470272005871103 0.03478277121465447 0.15507817483995967 2.553461580102416 0.009216249380505602 0.0808932053682916 5.075881636001175e-05 4.294488513730779 -0.21920350309070236 TQTVCNFTDGALVQHQEWDGK ddPTM_KYSE-520_SHP099_60min_R1 1 TQTVCNFTDGALVQHQEWDGK 21 0 I6L8B7;Q01469;A8MUU1 I6L8B7 FABP5;FABP5P3 Fatty acid-binding protein, epidermal;Putative fatty acid-binding protein 5-like protein 3 0 138.03 1.6074000000000002e-07 0.0 182370.0 190650.0 124170.0 168130.0 175170.0 156860.0 154260.0 155530.0 129720.0 141890.0 False True 172253.57255441794 181490.88782851584 132174.19687902447 184109.02464987227 188954.88241903734 155880.9785557373 169854.1062325188 154990.5027309748 106166.11797508832 140632.9649887496 1.2248449186021069 1.2905287735562911 0.9398521668770775 1.309145580942567 1.3436030622987536 1.1084241775618364 1.2077830133646605 1.1020922636692883 0.7549163027571909 1.0 17.10157528258413 -7.587911037388911 5.150006918284893 0.8816292642686295 1.1997737551157222 0.5273407579929008 0.12172625605324115 0.1574785160758562 8.042196314376508 0.08618340240605642 0.0310574151257432 2.5827892052758195e-08 7.587911037388911 0.3181444908470926 TQVAGGQLS(ph)FK ddPTM_KYSE-520_SHP099_60min_R1 1 TQVAGGQLSFK 11 0 P46060;B0QYT6;B0QYT5;B0QYT4 P46060 RANGAP1 Ran GTPase-activating protein 1 1 TQVAGGQLS(1)FK 93.823 0.0040142 0.0 167960.0 174110.0 180350.0 164930.0 174010.0 183090.0 157520.0 201660.0 172110.0 195570.0 True False 158642.92398004106 165745.4942555621 191975.6495702028 180604.8976119875 187703.59701853452 181947.267396213 173443.65884705266 200960.48852779804 140859.1625400284 193837.4019511575 0.8184329875614789 0.855074885379067 0.9903952882043694 0.9317339986711941 0.9683559268186614 0.9386592348264112 0.8947894322828183 1.0367477406575816 0.7266872188862789 1.0 17.56448744768322 -4.599798162504549 6.113237592436389 0.9366552621247869 0.8271023558182335 0.203057977884618 0.07994328704082257 0.26412095823180554 15.815366240606167 0.018910668234521085 0.05181288404756321 2.5130540970396275e-05 4.599798162504549 -0.10955290630655334 TQVLS(ph)PDSLFTAK ddPTM_KYSE-520_SHP099_60min_R1 6 TQVLSPDSLFTAK 13 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-1;H0Y948;H0Y8L4 A8MQ02 MLLT4 Afadin 1 TQVLS(0.999)PDS(0.001)LFTAK;TQVLS(0.995)PDS(0.005)LFTAK;TQVLS(1)PDSLFTAK;TQVLS(1)PDSLFTAK;TQVLS(0.997)PDS(0.003)LFTAK;TQVLS(1)PDSLFTAK 299.89 1.3203e-30 2207363000.0 3258330.0 3720220.0 2816230.0 2546240.0 2715770.0 4337100.0 3490850.0 5192800.0 5872770.0 4967340.0 True False 3077583.939580176 3541495.047035936 2997768.691927315 2788233.8840450295 2929485.648382422 4310030.550134436 3843739.185412856 5174787.388808633 4806423.008484116 4923333.232132038 0.6251016931972804 0.7193287311779828 0.6088900650401716 0.5663305229570235 0.5950207938928836 0.8754293782117176 0.7807188756444043 1.051073966522413 0.9762538471121739 1.0 22.231203959937847 -6.73227812082518 1.2688659046411495 1.0090380375805548 0.6246718415182115 0.8355485136345648 0.07097619534186399 0.17641164681581145 0.5731133285681549 0.04556767694771964 0.026952697098549975 1.8523450075650285e-07 6.73227812082518 -0.38436619606234323 TRDDGDEEGLLT(ph)HS(ph)EEELEHS(ph)QDT(ph)DADDGALQ ddPTM_KYSE-520_SHP099_60min_R1 1 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 4 TRDDGDEEGLLT(1)HS(1)EEELEHS(1)QDT(1)DADDGALQ 60.595 0.022808000000000002 675180000.0 116400.0 153520.0 113810.0 123860.0 124190.0 128240.0 98677.0 125960.0 157810.0 134660.0 True False 109943.05996235272 146144.66876178203 121146.37470243835 135631.61716013314 133963.04645555886 127439.6065917872 108652.2341547144 125523.07415928494 129155.68206636386 133467.0171638947 0.8237470372724742 1.0949871501385204 0.9076877364665544 1.0162182390993302 1.003716493424402 0.9548396997236707 0.8140755406355695 0.9404801038232932 0.9676973743090654 1.0 17.026123736550517 -6.531855145290968 24.902285420573257 0.9197253260704286 0.9758259773970461 0.03936272361982607 0.08044725186998462 467.32703115681306 1296442.0950642542 0.029096128709301707 0.022572301785803592 2.938629639912787e-07 6.531855145290968 0.05610065132661757 TRDDGDEEGLLT(ph)HS(ph)EEELEHS(ph)QDTDADDGALQ ddPTM_KYSE-520_SHP099_60min_R1 1 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 3 T(0.001)RDDGDEEGLLT(0.926)HS(0.717)EEELEHS(0.717)QDT(0.639)DADDGALQ 76.358 0.0093319 2761300000.0 145310.0 126970.0 113000.0 153780.0 83737.0 108990.0 85159.0 113360.0 229820.0 145030.0 True False 137249.36463169663 120870.17061414458 120284.16080639247 168395.20496435705 90326.62550164375 108309.75298221238 93767.70279174796 112966.78061842293 188090.48129074037 143745.1470316325 0.9548104229320075 0.8408643568853558 0.836787629288958 1.171484453157226 0.628380347906747 0.7534845886545148 0.6523190850478832 0.7858823963884046 1.3084996966843634 1.0 17.133153724604558 -7.748768860346533 24.999351054737307 1.1542498622580364 0.8251786393258744 0.3956877192809243 0.16124307549000494 200.01017760232963 394631.61934469995 0.11292182826159561 0.042054976514271876 1.7833276352753125e-08 7.748768860346533 -0.32907122293216196 TRDDGDEEGLLT(ph)HS(ph)EEELEHSQDTDADDGALQ ddPTM_KYSE-520_SHP099_60min_R1 4 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 2 TRDDGDEEGLLT(1)HS(0.995)EEELEHS(0.005)QDTDADDGALQ;TRDDGDEEGLLT(0.998)HS(0.973)EEELEHS(0.027)QDT(0.002)DADDGALQ;TRDDGDEEGLLT(0.955)HS(0.963)EEELEHS(0.042)QDT(0.04)DADDGALQ;TRDDGDEEGLLT(0.999)HS(0.996)EEELEHS(0.005)QDTDADDGALQ 145.23 2.1581999999999998e-05 25771600000.0 3702010.0 3299870.0 3339510.0 2828150.0 3325050.0 3297560.0 3085820.0 3016630.0 4625710.0 3536710.0 True False 3496652.125526027 3141339.2919941493 3554780.158004922 3096936.525685694 3586712.5180534297 3276978.704872224 3397764.800300986 3006166.0146167353 3785797.668659776 3505377.500918742 0.9975108599885667 0.8961486433831506 1.0140933913888681 0.88348160073316 1.023202926678616 0.934843309747194 0.9693006814274494 0.8575869542806258 1.0799971380165296 1.0 21.741138388560593 -7.7830922897710355 24.999926630145957 1.039998572664863 0.9483191618391539 0.3060408550959408 0.05597614063068209 312.53563039333375 360835.94127068523 0.04881921138058349 0.01265116125251184 1.647812185903954e-08 7.7830922897710355 -0.09167941082570918 TRDDGDEEGLLT(ph)HSEEELEHS(ph)QDTDADDGALQ ddPTM_KYSE-520_SHP099_60min_R1 1 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 2 TRDDGDEEGLLT(0.762)HS(0.281)EEELEHS(0.552)QDT(0.405)DADDGALQ 91.76100000000001 0.033983 8778600000.0 81195.0 67479.0 85528.0 97049.0 81375.0 91389.0 62640.0 97566.0 112670.0 77582.0 True False 76690.95149178029 64237.20755195611 91041.27172963836 106272.50778115417 87778.74953958525 90818.60735197166 68972.26250748722 97227.56631807557 92211.96817956524 76894.68383788264 0.9973505015440095 0.8353920498247664 1.1839735490893106 1.3820527307870714 1.141545099849159 1.181077843345385 0.8969704934726269 1.2644250742100822 1.1991982225192068 1.0 16.230596239559198 -4.7702703265319 24.987612341425738 1.1647786094091093 0.9163712682294666 0.34767947460980175 0.13095211688713226 178.33858495756323 504622.4317160148 0.03483872221312681 0.07429497359865797 1.6971869098863268e-05 4.7702703265319 -0.2484073411796427 TRDDGDEEGLLTHS(ph)EEELEHS(ph)QDT(ph)DADDGALQ ddPTM_KYSE-520_SHP099_60min_R1 2 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 3 TRDDGDEEGLLT(0.393)HS(0.607)EEELEHS(1)QDT(1)DADDGALQ;TRDDGDEEGLLT(0.082)HS(0.918)EEELEHS(1)QDT(1)DADDGALQ 188.41 1.8335e-15 6110300000.0 941970.0 774470.0 854560.0 808110.0 583420.0 732770.0 713430.0 705510.0 983450.0 785170.0 True False 889717.0463293601 737263.2986968308 909646.3049443446 884912.5314328698 629331.8347942841 728196.5106227706 785550.4668058192 703062.7504772714 804880.2707570202 778214.0046530161 1.143280692726752 0.9473786057416891 1.1688896621051306 1.1371069219287921 0.8086873675254477 0.935727841273498 1.0094273067677242 0.9034311208402726 1.0342659807515207 1.0 19.569807417561325 -5.735294385944668 24.995601080727564 0.9461601771019937 1.0933026011640763 0.447672748053177 0.08180549216962325 216.2739848000832 206765.1160658378 0.024028858749295372 0.03101070097431782 1.8395246593856172e-06 5.735294385944668 0.14714242406208256 TRDDGDEEGLLTHS(ph)EEELEHSQDTDADDGALQ ddPTM_KYSE-520_SHP099_60min_R1 9 TRDDGDEEGLLTHSEEELEHSQDTDADDGALQ 32 1 Q9UKM9-2;Q9UKM9 Q9UKM9-2 RALY RNA-binding protein Raly 1 TRDDGDEEGLLT(0.016)HS(0.88)EEELEHS(0.104)QDTDADDGALQ;TRDDGDEEGLLT(0.287)HS(0.711)EEELEHS(0.002)QDTDADDGALQ;T(0.001)RDDGDEEGLLT(0.206)HS(0.793)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.458)HS(0.541)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.001)HS(0.999)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.019)HS(0.981)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.205)HS(0.793)EEELEHS(0.001)QDTDADDGALQ;TRDDGDEEGLLT(0.014)HS(0.986)EEELEHSQDTDADDGALQ;TRDDGDEEGLLT(0.07)HS(0.93)EEELEHSQDTDADDGALQ 340.48 5.621299999999999e-82 69281810000.0 6354500.0 5287430.0 5265100.0 4837900.0 5118530.0 5205630.0 5036440.0 5175990.0 6711170.0 4728430.0 True False 6002003.2176183 5033413.926205767 5604496.770457855 5297692.561432323 5521329.1905481275 5173139.732239597 5545572.506117633 5158035.698775145 5492590.702828193 4686539.788862871 1.280689696027228 1.0740149775677166 1.1958709459325245 1.1304059711648669 1.1781248936942894 1.103829256828905 1.1832978606724247 1.1006064028374922 1.1719927601768851 1.0 22.16009170062001 -13.999999999938687 0.19905963358412326 0.31240287852813553 1.1783465944132836 0.4369665802414693 0.055209893988861176 127.68384565743939 1.2620727700168222 34.934107999822345 0.12245381014374598 1.0000000001411779e-14 13.999999999938687 0.8659437158851481 TRDELEVIHLIEEHR ddPTM_KYSE-520_SHP099_60min_R1 8 TRDELEVIHLIEEHR 15 1 P10155-3;P10155-5;P10155-4;P10155 P10155-3 TROVE2 60 kDa SS-A/Ro ribonucleoprotein 0 ;;;;;;; 228.51 3.1167e-14 2595067000.0 2163723.0 1617053.0 1264468.0 1176089.0 1557789.0 1379352.0 1235444.0 1273982.0 1375081.0 1088497.0 False True 2043696.9719151373 1539367.3466339617 1345977.6305003315 1287864.1449559496 1680378.1316930403 1370742.952523355 1360334.736291508 1269562.8537916348 1125400.9533711267 1078853.7634178523 1.8943225126643881 1.4268544994987862 1.2475996989955525 1.193733746523666 1.5575587615966917 1.2705549157846805 1.2609074393752056 1.1767701025295665 1.0431450410904726 1.0 20.04106789282496 -1.1348534075911723 0.8616657578215587 1.2210249008468341 199.9999958524345 0.6788128389224304 0.14142602288995168 349.52020557411794 1.1923920653647873 0.05024080877312489 135909.13443357145 0.073307193357923 1.1348534075911723 198.77897095158767 TRDPTPRPPGLPEEATALAAPS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 TRDPTPRPPGLPEEATALAAPSPPR 25 2 Q96GP6-2;Q96GP6 Q96GP6-2 SCARF2 Scavenger receptor class F member 2 1 TRDPTPRPPGLPEEATALAAPS(1)PPR 135.41 1.2773e-06 1212600000.0 310740.0 375360.0 260820.0 356330.0 349160.0 335580.0 232030.0 411250.0 433350.0 374320.0 True False 293502.6327551674 357327.1421731534 277632.87452675495 390195.4960654788 376636.905551356 333485.5207429196 255485.85679457628 409823.46973647183 354664.56386451283 371003.816016553 0.7911040805630749 0.9631360291917067 0.7483288918903407 1.0517290637465289 1.0151833735708842 0.8988735596402613 0.6886340403118045 1.1046341089876737 0.9559593420696482 1.0 18.501074500419936 -2.680836176283796 0.6030895581318249 0.9459899782045686 4.942310748105597e-14 0.11377571425300748 0.12277417311930594 55.37831277398636 3.369881618133333 0.057394850821106784 55.276779495245535 0.00208527733900016 2.680836176283796 -0.9459899782045192 TREFEDRDR ddPTM_KYSE-520_SHP099_60min_R1 3 TREFEDRDR 9 2 Q13951-2;A0A494C0A9;Q13951;J3KS23 Q13951-2 CBFB Core-binding factor subunit beta 0 ;; 187.33 3.8065e-06 3284920000.0 2057080.0 2387640.0 1861700.0 1234650.0 2015840.0 1978470.0 1377080.0 1600740.0 2153440.0 1447460.0 False True 1942969.6717126844 2272934.1904792935 1981708.1608253194 1351990.764788943 2174475.139439359 1966121.634853817 1516288.685405659 1595187.4065555236 1762429.579804768 1434636.63050684 1.3543287759397697 1.5843274472061213 1.3813310762358029 0.9423924748884328 1.515697489664085 1.3704666345785481 1.05691479860651 1.111910411761871 1.2284849991472215 1.0 20.452253941939624 -1.0000000464171044 0.11231843037308883 0.8794414764619458 2.7121155548270326 0.33952329252723323 0.1702285779554211 123.50396336571019 0.9670479409719573 1.5270695460313874 35.15143747211118 0.09999998931206731 1.0000000464171044 1.8326740783650868 TRENLEK ddPTM_KYSE-520_SHP099_60min_R1 4 TRENLEK 7 1 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 0 ;;; 96.948 0.0064748 3298270000.0 2770170.0 2754760.0 1988050.0 1758900.0 2788570.0 2659600.0 1989710.0 2497600.0 2621660.0 2486670.0 False True 2616503.1479030126 2622417.19462094 2116202.883992466 1926065.327167432 3008014.59420708 2643000.4498714716 2190849.3044982776 2488936.4085442196 2145632.630670448 2464640.038399983 1.0616167501691716 1.0640163081678182 0.8586255400469277 0.7814793629733501 1.220468120026099 1.0723677326881689 0.8889124863525923 1.0098579791635656 0.8705663290544321 1.0 21.23294552516206 -6.769274450992597 24.899341540938746 0.9431557193338381 1.0045595823035105 0.06901882275311189 0.12039876379106196 633.5695737415973 2013418.3305772848 0.05336688382943302 0.03670712916932795 1.7010831746458528e-07 6.769274450992597 0.061403862969672374 TRHGS(ph)ASQVQK ddPTM_KYSE-520_SHP099_60min_R1 2 TRHGSASQVQK 11 1 H0Y465;P21359-2;P21359-6;P21359;J3QSG6 H0Y465 NF1 Neurofibromin;Neurofibromin truncated 1 T(0.001)RHGS(0.998)ASQVQK;T(0.002)RHGS(0.998)ASQVQK 148.18 4.2013999999999994e-05 246370000.0 258849.0 348830.0 246297.0 378370.0 273780.0 284664.0 243400.0 221119.0 368820.0 308740.0 True False 244490.12996731163 332071.68319549516 262173.69870913326 414330.1710389118 295324.9284048868 282887.30638525053 268005.2473550825 220351.98979856266 301851.5851955914 306004.8037960855 0.7989748099844672 1.0851845431053428 0.8567633431135274 1.353998910798184 0.9650989943337114 0.9244538088158905 0.8758203924591815 0.7200932373120524 0.986427603263177 1.0 18.223194775584776 -6.262354498919832 3.3556748184583705 0.8783687918190917 1.0288692937948354 0.10690182011943183 0.15689137679351417 0.46477688814803003 11.076888551939527 0.05605576105313613 0.05219132464340439 5.46569635680448e-07 6.262354498919832 0.15050050197574372 TRHS(ph)PT(ph)PQQSNR ddPTM_KYSE-520_SHP099_60min_R1 9 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 T(0.153)RHS(0.859)PT(0.983)PQQS(0.005)NR;T(0.004)RHS(0.996)PT(1)PQQSNR;T(0.051)RHS(0.962)PT(0.987)PQQSNR;TRHS(0.916)PT(0.964)PQQS(0.12)NR;T(0.001)RHS(0.981)PT(0.71)PQQS(0.308)NR;T(0.007)RHS(0.993)PT(1)PQQSNR;TRHS(1)PT(1)PQQSNR;T(0.109)RHS(0.892)PT(0.997)PQQS(0.002)NR;T(0.12)RHS(0.88)PT(0.978)PQQS(0.021)NR 191.63 4.009e-08 8332767000.0 2267777.0 1999653.0 1835646.0 2085231.0 1818553.0 1968648.0 1804838.0 1943523.0 2205854.0 1956136.0 True False 2141978.88910863 1903586.6683396536 1953974.678297445 2283410.727292437 1961662.7749488347 1956360.937599103 1987288.6385614316 1936781.3723346768 1805326.5186541814 1938806.1568907811 1.1047927001344333 0.9818344456840347 1.007823640002768 1.177740600408599 1.0117890166465677 1.0090544279766853 1.02500635842234 0.99895565394771 0.9311536959163272 1.0 20.886737138384127 -6.873892692896645 1.1310949947489826 0.9715095381878609 1.0548303025901646 0.2749922785212683 0.05543987021242572 0.7434574530510438 1.8446148475856612 0.04185531969160642 0.02153609917540179 1.3369258083641257e-07 6.873892692896645 0.08332076440230374 TRHS(ph)PTPQQSNR ddPTM_KYSE-520_SHP099_60min_R1 16 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.159)RHS(0.813)PT(0.014)PQQS(0.014)NR;TRHS(0.58)PT(0.113)PQQS(0.307)NR;TRHS(0.999)PT(0.001)PQQSNR;T(0.087)RHS(0.572)PT(0.34)PQQSNR;T(0.052)RHS(0.947)PT(0.001)PQQSNR;T(0.087)RHS(0.911)PT(0.002)PQQSNR;TRHS(1)PTPQQSNR;TRHS(1)PTPQQSNR;T(0.008)RHS(0.983)PT(0.008)PQQSNR;T(0.009)RHS(0.991)PTPQQSNR;TRHS(0.999)PT(0.001)PQQSNR;T(0.016)RHS(0.981)PT(0.002)PQQSNR;T(0.219)RHS(0.39)PT(0.39)PQQSNR;T(0.046)RHS(0.947)PT(0.007)PQQSNR;T(0.09)RHS(0.901)PT(0.008)PQQSNR;T(0.012)RHS(0.987)PT(0.002)PQQSNR 184.51 1.1860999999999999e-07 671350799000.0 7687646.7 7464386.2 6431131.0 8402928.0 6995862.9 7142566.199999999 6639652.9 7010315.8 8216350.0 6496536.899999999 True False 7261197.612607243 7105785.8826798955 6845691.994433427 9201539.750687571 7546397.50921508 7097986.794945386 7310853.811899717 6985998.6507098125 6724467.957328224 6438982.637295221 1.1276933052357792 1.1035572361264783 1.0631636051916813 1.429036273120438 1.1719860006308456 1.1023460063136603 1.1354051134653684 1.0849537953785153 1.0443370228053488 1.0 22.618401329080985 -7.428863517063885 1.01875201946662 1.0059447510200665 1.1739770331561683 0.28406297950276715 0.0939462746838913 0.7521641247509866 1.4102064095191802 0.09145796362006257 0.03430044958676588 3.725087537940845e-08 7.428863517063885 0.16803228213610177 TRHSPTPQQS(ph)NR ddPTM_KYSE-520_SHP099_60min_R1 1 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 T(0.009)RHS(0.169)PT(0.216)PQQS(0.606)NR 155.39 4.8008999999999994e-05 941680000.0 325120.0 306400.0 288260.0 339750.0 287030.0 294760.0 283060.0 280420.0 355930.0 261420.0 True False 307084.9454893483 291680.08408422343 306841.7008323075 372039.73785043764 309617.62802269944 292920.29350432975 311674.4671993825 279447.2884705201 291302.08426513453 259104.02218168226 1.1851801562309292 1.12572580552107 1.1842413647178038 1.4358701756839787 1.1949549274290976 1.1305123364659144 1.2028932031816864 1.0785138961469818 1.124266932687271 1.0 17.98317188569595 -7.585444219537136 0.7813785003825378 1.0112096438552036 1.2216213757012513 0.3995847930601578 0.08329791971092645 0.6713056821497431 0.8433853440803537 0.08469338836194516 0.03470811710728897 2.597501341133904e-08 7.585444219537136 0.21041173184604767 TRHSPTPQQSNR ddPTM_KYSE-520_SHP099_60min_R1 7 TRHSPTPQQSNR 12 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 0 ;;;;;; 156.08 9.248300000000001e-06 3326600000.0 298003.2 327140.0 285108.9 311272.0 264271.0 284950.8 268287.9 280320.8 312405.0 253983.7 False True 281472.3684413488 311423.7033528492 303487.47588436934 340855.1972926605 285067.6242036956 283172.3163600677 295409.05916957924 279348.43257216655 255680.12708917263 251733.60201432873 1.1181358634248888 1.2371161452459687 1.2055898515570231 1.3540313830382442 1.1324178493559613 1.1248888272927087 1.1734987177149456 1.1096986271871085 1.0156773869013294 1.0 17.94153827823744 -7.360264593236781 0.7696437177050797 0.9927271872751137 1.2171074599231175 0.5778900303037044 0.0639545188508683 0.4673614296628675 0.5311942795429818 0.06126396591470399 0.02717521562901258 4.362499666464743e-08 7.360264593236781 0.22438027264800386 TRHT(ph)LEK ddPTM_KYSE-520_SHP099_60min_R1 6 TRHTLEK 7 1 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 1 T(0.104)RHT(0.896)LEK;T(0.001)RHT(0.999)LEK;T(0.016)RHT(0.984)LEK;T(0.006)RHT(0.994)LEK;T(0.001)RHT(0.999)LEK;T(0.001)RHT(0.999)LEK 113.69 0.0077257 24690900000.0 10047760.0 8325560.0 5003370.0 7187610.0 10763890.0 9653410.0 7755090.0 7521210.0 7356450.0 11390650.0 True False 9490390.723087026 7925587.600679658 5325895.2358750515 7870718.293366261 11610946.904843593 9593159.48743938 8539050.179584745 7495120.67797361 6020704.121013256 11289737.702791609 0.8406210111276846 0.7020169829738295 0.47174658757201415 0.6971568782700834 1.028451431778841 0.8497238589579705 0.7563550548630813 0.6638879374602561 0.533289991274511 1.0 23.42850863222877 -4.247556715167921 21.716628374580203 0.7367252548989526 0.8406214332744323 0.026095886458836648 0.16948361892059344 1734.0770141503117 2712303.8377555762 0.044396517303377944 0.7338981833061274 5.6551390095805675e-05 4.247556715167921 0.10389617837547971 TRHT(ph)LEKR ddPTM_KYSE-520_SHP099_60min_R1 8 TRHTLEKR 8 2 Q6NZI2;Q6NZI2-2;Q6NZI2-3 Q6NZI2 PTRF Polymerase I and transcript release factor 1 TRHT(1)LEKR;TRHT(1)LEKR;TRHT(1)LEKR;TRHT(1)LEKR;T(0.001)RHT(0.999)LEKR;TRHT(1)LEKR;TRHT(1)LEKR;TRHT(1)LEKR 170.4 0.00010153 40934300000.0 8377050.0 7672430.0 5924020.0 5634660.0 7343390.0 6386370.0 5448370.0 5214000.0 7020430.0 4214530.0 True False 7912358.337264843 7303834.9462477835 6305891.80796714 6170176.392277694 7921273.014826361 6346510.2959263325 5999144.41056702 5195913.850956748 5745696.882638368 4177192.543054729 1.8941809015771713 1.748503299995499 1.5096004656169668 1.477110841475725 1.8963150329272667 1.5193243381798265 1.4361665996319912 1.2438770292252417 1.3754924685460181 1.0 21.994102213784448 -7.356243174431557 0.21323849062765418 0.829881905170709 1.9623449766757113 0.7262920170652505 0.13933961733574726 1.4620812986081002 0.32366643856836663 0.6278704950256758 0.6673864343654446 4.403082527494466e-08 7.356243174431557 1.1324630715050024 TRIT(ph)PEEMSLK ddPTM_KYSE-520_SHP099_60min_R1 2 TRITPEEMSLK 11 1 Q9H7U1-2;Q9H7U1;Q9H7U1-3 Q9H7U1-2 CCSER2 Serine-rich coiled-coil domain-containing protein 2 1 T(0.098)RIT(0.902)PEEMSLK;T(0.148)RIT(0.852)PEEMSLK 137.52 0.00028926 694380000.0 1351660.0 1268730.0 1003820.0 956640.0 983710.0 1340190.0 1019860.0 1272400.0 1362200.0 1335430.0 True False 1276680.7253325921 1207778.3063974464 1068527.8433687869 1047558.7779756952 1061122.3804557358 1331825.3770917603 1122957.401674424 1267986.3413803934 1114858.8182675403 1323599.1291488197 0.9645524065534858 0.9124955432496731 0.8072896240540259 0.7914471647086678 0.8016946801242779 1.006215059954165 0.8484120130817672 0.957983662467208 0.8422934056963938 1.0 20.336034816878218 -6.24429551708678 24.956234195656208 0.9231942658585459 0.8524261484669888 0.2152745337702232 0.07116830112334656 1451.3135806093337 2112670.1308803824 0.024123637982935046 0.024065267904074518 5.697764341228878e-07 6.24429551708678 -0.07076811739155708 TRKS(ph)EVSETK ddPTM_KYSE-520_SHP099_60min_R1 4 TRKSEVSETK 10 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 T(0.001)RKS(0.564)EVS(0.318)ET(0.117)K;T(0.007)RKS(0.976)EVS(0.013)ET(0.004)K;T(0.007)RKS(0.954)EVS(0.03)ET(0.009)K;T(0.278)RKS(0.711)EVS(0.003)ET(0.008)K 117.03 0.00043180000000000003 5117850000.0 3570110.0 3501270.0 3190880.0 3188050.0 3589210.0 3332300.0 3364740.0 3582460.0 4296870.0 3870410.0 True False 3372068.881462157 3333063.7336865827 3396569.2303885156 3491041.313477819 3871660.407188628 3311501.879646079 3704880.7558978614 3570033.282412447 3516666.723277966 3836121.178533414 0.8790308555245722 0.8688629943021886 0.8854176060431587 0.9100445869680471 1.0092643654882667 0.8632422505777303 0.96578824898182 0.9306362120128086 0.9167246183350292 1.0 21.871216863430988 -1.0000000000000002 0.11145139695993753 1.0134430203487605 0.5745756022910137 0.3865178493293716 0.039407987278644 116.8496035056016 0.9090896963596442 0.35033286419154874 7.896828659977614 0.09999999999999995 1.0000000000000002 -0.43886741805774687 TRKS(ph)PQVTR ddPTM_KYSE-520_SHP099_60min_R1 1 TRKSPQVTR 9 2 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QXV1;M0QX88;M0R200;M0R073;Q8IV63-3 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 T(0.497)RKS(0.503)PQVTR 61.48 0.021133000000000002 261430000.0 108370.0 99237.0 106930.0 87465.0 95462.0 109510.0 76372.0 71082.0 123010.0 98425.0 True False 102358.50006976101 94469.50556222614 113822.87889404935 95777.64730268896 102974.31629551935 108826.50746932813 84092.42707889213 70835.43313266347 100674.4848297536 97553.0310734914 1.0492600685328723 0.9683912895649313 1.1667795212667569 0.9818008343639784 1.0555726988938339 1.1155625434882068 0.8620175729398019 0.7261223188370204 1.0319975066065417 1.0 16.57389907910603 -6.770014394904446 24.999859282075835 0.882211170007353 1.0538475118084984 0.36908774015637835 0.09495345531668473 178.92558767541283 521639.61675773497 0.037907535560915306 0.02600613697794174 1.698187364272537e-07 6.770014394904446 0.1716363418011454 TRKSEVS(ph)ETK ddPTM_KYSE-520_SHP099_60min_R1 1 TRKSEVSETK 10 2 Q3KQU3-4;Q3KQU3;Q3KQU3-2;Q3KQU3-3 Q3KQU3-4 MAP7D1 MAP7 domain-containing protein 1 1 T(0.01)RKS(0.149)EVS(0.746)ET(0.094)K 79.875 0.0083535 649210000.0 532910.0 472780.0 472830.0 452840.0 537370.0 493900.0 467460.0 475090.0 611530.0 574410.0 True False 503348.4199702525 450066.9391427519 503309.3783547494 495877.77744868887 579657.961782942 490817.386897097 514715.41876995435 473442.02367684006 500491.56741678825 569321.1742842172 0.88412032207144 0.790532584193099 0.8840517463407864 0.870998304379131 1.0181563376976464 0.8621098407488188 0.904086203041866 0.8315904010984277 0.8791023240019741 1.0 19.118883232108526 TRLS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 3 TRLSPPR 7 1 Q96PK6 Q96PK6 RBM14 RNA-binding protein 14 1 T(0.001)RLS(0.999)PPR;T(0.017)RLS(0.983)PPR;T(0.004)RLS(0.996)PPR 93.111 0.0044428 48165400000.0 597693.0 512984.0 458261.0 552114.0 446312.0 499320.0 607017.0 486481.0 589470.0 480733.0 True False 564537.7778185442 488339.4786353177 487801.2373035245 604586.7485608734 481434.21523209126 496203.55866665073 668380.2022750215 484793.51095651934 482437.1073294436 476474.0796246149 1.1848236912767833 1.0249025068059334 1.0237728727821533 1.2688764707561653 1.0104100848704805 1.0414072451907133 1.4027629851378227 1.0174604069511164 1.0125149047132356 1.0 18.862038207534958 -7.477476395375109 24.999916552259048 1.00916607604618 1.130730707073701 0.19192278840025223 0.11882862203986984 733.3569979099142 403809.9050678154 0.06532080353388042 0.031376732449158826 3.33060864226793e-08 7.477476395375109 0.12156463102752091 TRLS(ph)TASEETVQNR ddPTM_KYSE-520_SHP099_60min_R1 5 TRLSTASEETVQNR 14 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 TRLS(0.996)T(0.004)ASEETVQNR;T(0.001)RLS(0.494)T(0.494)AS(0.009)EET(0.003)VQNR;T(0.084)RLS(0.876)T(0.039)ASEETVQNR;TRLS(0.897)T(0.087)AS(0.016)EET(0.001)VQNR;T(0.002)RLS(0.946)T(0.044)AS(0.007)EET(0.001)VQNR 187.56 1.6947e-10 2372820000.0 864526.0 886974.0 827086.0 708959.0 875599.0 1179594.0 1311833.0 1539410.0 1754964.0 1447016.0 True False 816569.0193901461 844362.4376648839 880401.2869443897 776338.250203705 944503.6598231803 1172231.7162978232 1444445.8818963026 1534070.1460109937 1436306.7766422534 1434196.5640014117 0.5693564186989242 0.5887355045037277 0.6138637541342785 0.541305334073399 0.6585594217211154 0.817343832582679 1.0071463829660108 1.069637303920834 1.001471355247815 1.0 20.451811335676396 -6.463311199780124 1.7872518651034892 1.0335113733161436 0.5818245718224048 0.9795429074662957 0.02910728948792119 0.04420899524089066 0.2823194345810769 0.013235528211359275 0.010433093473280322 3.441032703928e-07 6.463311199780124 -0.45168680149373885 TRLST(ph)ASEETVQNR ddPTM_KYSE-520_SHP099_60min_R1 1 TRLSTASEETVQNR 14 1 O43379;O43379-4;H7C3R4;O43379-3;O43379-2 O43379 WDR62 WD repeat-containing protein 62 1 TRLS(0.325)T(0.648)AS(0.027)EETVQNR 115.04 0.00044975 759470000.0 284790.0 254140.0 263440.0 255210.0 305290.0 442450.0 471110.0 597940.0 685900.0 623660.0 True False 268992.1309852097 241930.73292808267 280421.76391890354 279465.0816683159 329314.58613751124 439688.50543150626 518734.396390521 595865.8857002449 561357.8501319243 618134.857600138 0.43516738730695653 0.39138827062327547 0.4536579040496436 0.45211021224934317 0.5327552427896564 0.7113148531027091 0.839192920464748 0.9639739263591269 0.9081478632532612 1.0 19.237562097624938 -6.495529486251662 1.0719543580602526 0.9704601589387187 0.4167794456291202 0.9876709032359074 0.025520034370662595 0.04637586555729817 0.10965239050013417 0.014732373886062364 0.010678534252462915 3.194997434360028e-07 6.495529486251662 -0.5536807133095984 down TRMS(ph)LGTK ddPTM_KYSE-520_SHP099_60min_R1 1 TRMSLGTK 8 1 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 T(0.003)RMS(0.997)LGTK 89.266 0.0029788 457290000.0 571450.0 613140.0 589910.0 564560.0 552710.0 501410.0 442330.0 561870.0 693220.0 579530.0 True False 539750.5293426679 583683.8340580972 627936.5424893721 618215.6126588467 596205.1325102826 498280.5142014042 487045.03312478884 559921.0041114442 567348.7226541073 574395.8150675173 0.9396839517001406 1.0161700673071374 1.0932122519304242 1.0762885042715336 1.037969144047823 0.8674863241175144 0.847925803685633 0.9747999366005623 0.9877312956874839 1.0 19.13168571244991 -6.238176285853819 23.41540508121083 0.9285347454574642 1.0375357309377462 0.3944084169219505 0.05967411415222102 361.5121304697247 363878.7367378409 0.021172816149671692 0.02115574580034916 5.778614382199866e-07 6.238176285853819 0.10900098548028203 TRNS(ph)GIWESPELDR ddPTM_KYSE-520_SHP099_60min_R1 7 TRNSGIWESPELDR 14 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 T(0.227)RNS(0.772)GIWESPELDR;T(0.245)RNS(0.755)GIWESPELDR;T(0.19)RNS(0.81)GIWESPELDR;TRNS(0.97)GIWES(0.03)PELDR;TRNS(0.592)GIWES(0.408)PELDR;TRNS(1)GIWESPELDR;TRNS(0.564)GIWES(0.435)PELDR 256.08 5.9697e-20 6834430000.0 3581830.0 3060550.0 3088640.0 2734360.0 2921530.0 3026610.0 2923280.0 2992590.0 3815510.0 3227320.0 True False 3383138.7496989197 2913516.584020791 3287738.676398731 2994232.7522846856 3151437.7897681696 3007719.8043260253 3218793.6708634626 2982209.403765759 3122709.5651798425 3198728.4556169673 1.0576511250144187 0.9108358600757923 1.0278267511659083 0.9360696895126602 0.9852157923046718 0.9402860686859709 1.0062728723381507 0.9323108995166498 0.976234653396841 1.0 21.609067094643454 -4.234533036226812 24.25677023553433 0.9679106217975504 1.0576513092978126 0.3599591265903833 0.03572383243730166 6687.128855910914 6028482.835441193 0.007945397649226622 0.6692475437963142 5.827294456253504e-05 4.234533036226812 0.0897406875002622 TRPDGNCFYR ddPTM_KYSE-520_SHP099_60min_R1 2 TRPDGNCFYR 10 1 J3KR44;F5H6Q1;F5GYJ8;Q96FW1;F5GYN4 J3KR44 OTUB1 Ubiquitin thioesterase OTUB1 0 ; 208.56 6.647999999999999e-09 1253270000.0 523420.0 367880.0 282570.0 283010.0 421420.0 380130.0 333650.0 362840.0 321470.0 340340.0 False True 494384.8491880986 350206.49260086264 300784.9143279855 309907.1853099405 454583.3564481966 377757.46766793623 367378.5981102027 361581.39272749284 263099.1515992264 337324.8523805129 1.4656045817531913 1.038187640576861 0.8916773021772222 0.918720287351836 1.347613000465831 1.1198625449684154 1.0890943715460022 1.0719085480236652 0.7799578054878754 1.0 18.363779087145957 -4.261464021157041 12.422865900681902 1.03779549677131 1.4658461455274667 0.44907525718950236 0.14489837485895293 0.057822293681884115 1037.6727927493741 0.037746150164676494 0.210455445584592 5.4769147222511834e-05 4.261464021157041 0.4280506487561566 TRPGS(ph)FQSLSDALSDTPAK ddPTM_KYSE-520_SHP099_60min_R1 2 TRPGSFQSLSDALSDTPAK 19 1 G3V4K3;Q9H9C1-2;Q9H9C1 G3V4K3 VIPAS39 Spermatogenesis-defective protein 39 homolog 1 T(0.024)RPGS(0.952)FQS(0.024)LSDALSDTPAK;T(0.006)RPGS(0.988)FQS(0.006)LSDALSDTPAK 224.83 3.8169000000000003e-19 8750100000.0 8113500.0 5475200.0 3678990.0 3549880.0 3681030.0 5099200.0 3815700.0 4305800.0 5038800.0 4999500.0 True False 7663427.9811387295 5212163.173557253 3916143.581992125 3887259.527889664 3970706.1188043007 5067374.001347802 4201428.193643334 4290864.184781271 4123880.9378112466 4955208.319552148 1.546540021516462 1.051855509886682 0.7903085661484494 0.7844795369250984 0.8013197150837794 1.022635916506895 0.8478812438753452 0.8659301300917012 0.8322315979207839 1.0 22.240514279665756 -4.313500798737635 2.6887808696473834 0.8635123174840849 1.639071578772797 0.8689393510685626 0.07933126056750245 0.12842366865718702 1.3365313831172116 0.020848173925350818 0.20997847056100014 4.858466373863032e-05 4.313500798737635 0.7755592612887121 TRPGSFQS(ph)LSDALSDTPAK ddPTM_KYSE-520_SHP099_60min_R1 1 TRPGSFQSLSDALSDTPAK 19 1 G3V4K3;Q9H9C1-2;Q9H9C1 G3V4K3 VIPAS39 Spermatogenesis-defective protein 39 homolog 1 T(0.026)RPGS(0.165)FQS(0.404)LS(0.404)DALS(0.001)DTPAK 82.54299999999999 0.0052815 450220000.0 597820.0 433070.0 324220.0 267370.0 308450.0 400860.0 341020.0 386090.0 419230.0 417910.0 True False 564657.7328753754 412264.6671486778 345119.7399703418 292780.764412278 332723.2601595712 398358.0840485326 375493.6296344711 384750.7439040838 343108.3999282784 414207.64252905984 1.363223839685093 0.9953091754451495 0.833204664846639 0.7068453943162992 0.8032764874352315 0.9617352340875379 0.9065347692326254 0.928883739457054 0.8283487910395249 1.0 18.659994647350754 -4.303062695468216 2.65508551851197 0.8656022071115147 1.437818080913746 0.7698646263165756 0.08082911694874306 0.19961220587648504 1.9822730049412136 0.022460825989985753 0.24199878256892565 4.9766523601806916e-05 4.303062695468216 0.5722158738022313 TRPGSFQSLS(ph)DALSDTPAK ddPTM_KYSE-520_SHP099_60min_R1 1 TRPGSFQSLSDALSDTPAK 19 1 G3V4K3;Q9H9C1-2;Q9H9C1 G3V4K3 VIPAS39 Spermatogenesis-defective protein 39 homolog 1 T(0.044)RPGS(0.212)FQS(0.164)LS(0.453)DALS(0.126)DT(0.002)PAK 114.99 6.368899999999999e-05 427240000.0 365190.0 250580.0 208070.0 162540.0 168950.0 225460.0 181220.0 199320.0 283200.0 225060.0 True False 344932.18271178356 238541.7606717518 221482.52512377067 177987.7527305671 182245.40380599603 224052.82050985927 199539.48613676275 198628.60544163795 231778.01889103508 223066.14349403058 1.5463224374119966 1.0693768087586781 0.9929006780434957 0.7979146899777293 0.8170016343644416 1.0044232486399494 0.8945305773939763 0.8904471217836489 1.0390551217703625 1.0 17.767112035442253 -4.168933597347647 1.7625059300387016 0.9157934398585634 1.8645871044611284 0.853689098568256 0.07669785919107373 0.4116286856879403 1.0663148775269362 0.021399324889066144 0.7025348742433932 6.777451253988012e-05 4.168933597347647 0.948793664602565 TRPWLQELSMGS(ph)PGPVTNK ddPTM_KYSE-520_SHP099_60min_R1 4 TRPWLQELSMGSPGPVTNK 19 1 A0A1B0GV70;Q96N21-2;Q96N21 A0A1B0GV70 ENTHD2 AP-4 complex accessory subunit tepsin 1 TRPWLQELS(0.001)MGS(0.999)PGPVTNK;T(0.002)RPWLQELS(0.006)MGS(0.992)PGPVTNK;TRPWLQELSMGS(1)PGPVTNK;TRPWLQELS(0.001)MGS(0.999)PGPVTNK 195.3 3.8932e-13 5304590000.0 2522260.0 2315470.0 2084210.0 2126320.0 2351730.0 2474040.0 2148640.0 2100370.0 2809890.0 2309330.0 True False 2382345.2097993447 2204231.3456086754 2218561.511453908 2328404.813498582 2536797.7714866837 2458598.5986614586 2365845.499905607 2093084.3067000448 2299684.8075626027 2288871.1328315507 1.0408385057712524 0.9630211653208419 0.9692819659573132 1.0172721303964913 1.1083183037694326 1.0741533515781376 1.033629838731389 0.9144614026874903 1.004724457648987 1.0 21.126204808426404 -7.2169717036328285 24.75164494247277 0.9696946374591103 1.02890742768469 0.23427252134231147 0.04663231083791844 602.5822811029461 335410.53063028306 0.024436960601981392 0.01410857195317866 6.067758626564784e-08 7.2169717036328285 0.05921279022557957 TRQS(ph)PQTLK ddPTM_KYSE-520_SHP099_60min_R1 5 TRQSPQTLK 9 1 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QXV1;M0QX88;M0R200;M0R073;Q8IV63-3 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 T(0.003)RQS(0.996)PQT(0.001)LK;TRQS(0.998)PQT(0.002)LK;T(0.002)RQS(0.933)PQT(0.065)LK;T(0.244)RQS(0.753)PQT(0.003)LK;T(0.245)RQS(0.755)PQTLK 114.76 0.0014725 1781600000.0 4472500.0 3728840.0 3588340.0 3805020.0 3882330.0 3953040.0 3799280.0 4068490.0 4366550.0 3994420.0 True False 4224401.509292289 3549700.9292970547 3819650.1379469973 4166647.956779024 4187847.283563976 3928367.6110542645 4183348.299799583 4054377.3577827015 3573694.591767829 3959032.5464117383 1.0670287399180558 0.8966081707295687 0.9647938210078445 1.052440945592998 1.0577956191240772 0.9922544371641332 1.056659234486757 1.0240828561658022 0.9026686570199682 1.0 21.916716496847226 -3.9304182378233916 20.967170607777042 0.9986345501320534 3.034744375975673 0.12841968248998514 0.055871495891177084 1339.4957363931887 410764.4533721117 0.013975813206981061 2248.2895331699174 0.00011737666401273031 3.9304182378233916 2.03610982584362 TRQS(ph)PQTLKR ddPTM_KYSE-520_SHP099_60min_R1 1 TRQSPQTLKR 10 2 M0QXD7;M0R025;M0QYG0;M0QYA8;Q8IV63-2;Q8IV63;M0QXV1;M0QX88;M0R200;M0R073;Q8IV63-3 M0QXD7 VRK3 Inactive serine/threonine-protein kinase VRK3 1 T(0.227)RQS(0.772)PQT(0.001)LKR 74.53699999999999 0.0136 1023500000.0 823170.0 665490.0 700000.0 558830.0 678460.0 627610.0 569330.0 635890.0 821460.0 642820.0 True False 777507.1191512888 633518.8614791442 745123.1200395994 611941.0351816341 731850.9420906552 623692.8531898911 626883.4325253457 633684.2460078424 672303.5713214322 637125.1149063926 1.2203366355531617 0.9943398033716214 1.1695083157239436 0.96047231676237 1.1486769630768359 0.9789173878062003 0.9839251629838016 0.9945993827302573 1.0552143614997944 1.0 19.281217182759526 -1.0000000000000002 0.5126958732587806 1.0133426096264966 6.801591709171233 0.3591408078482554 0.07122468534511574 129.6660276585356 1.332484591345145 0.03594856712142438 813.1843846475848 0.09999999999999995 1.0000000000000002 5.788249099544736 TRS(ph)EITFGQVK ddPTM_KYSE-520_SHP099_60min_R1 2 TRSEITFGQVK 11 1 H7C1A4;F5H5A3;Q8IVH8-3;Q8IVH8-2;Q8IVH8 H7C1A4 MAP4K3 Mitogen-activated protein kinase kinase kinase kinase;Mitogen-activated protein kinase kinase kinase kinase 3 1 T(0.263)RS(0.737)EITFGQVK;T(0.131)RS(0.869)EITFGQVK 156.88 2.368e-05 810060000.0 1405010.0 1447600.0 1431460.0 1656650.0 1708320.0 1249560.0 1522150.0 1877710.0 1690820.0 1995400.0 True False 1327071.2944820041 1378055.1231081025 1523734.2020169804 1814097.5179100146 1842755.0649888082 1241761.0325392515 1676023.776752421 1871196.6622708084 1383809.7101036015 1977722.3083977113 0.671009923307765 0.6967889866320817 0.7704490137705238 0.9172660439774983 0.9317562213684846 0.6278743114068868 0.8474515201834797 0.9461372075975587 0.6996986908767393 1.0 20.91540844111281 -3.421676756310035 0.04293934321871453 1.4167401417944867 4.706446911069857e-19 0.28060809437355894 0.10775255590818034 605.6663250492328 3.226820278391001 35.40247745933346 77.75664185453283 0.00037872436290789404 3.421676756310035 -1.4167401417944867 TRS(ph)EREWDRDK ddPTM_KYSE-520_SHP099_60min_R1 3 TRSEREWDRDK 11 3 S4R3H4;Q9UKV3;E7EQT4;Q9UKV3-3;Q9UKV3-2;Q9UKV3-5 S4R3H4;Q9UKV3-5 ACIN1 Apoptotic chromatin condensation inducer in the nucleus 1 T(0.05)RS(0.95)EREWDRDK;T(0.168)RS(0.832)EREWDRDK;T(0.134)RS(0.866)EREWDRDK 107.82 0.00070217 3934740000.0 1392210.0 1583590.0 1820780.0 1554610.0 1485330.0 1406630.0 1321760.0 1511730.0 2684860.0 1041220.0 True False 1314981.3359981712 1507511.9593829482 1938150.3921510053 1702359.666989461 1602217.0206283529 1397850.7004070934 1455376.399934485 1506486.1614704346 2197357.103812794 1031995.6008569021 1.2742121525579142 1.460773629394552 1.8780607112488572 1.6495803524510495 1.552542490779976 1.3545122665701375 1.4102544610907597 1.4597796349321126 2.1292310761676227 1.0 19.97700539024478 -6.013256392082944 22.97122920129865 1.4910234017004538 1.5830523809596826 0.02030347589075754 0.29603012806313095 1227.824844952799 2127634.5490646716 0.09586571285416642 0.1002779206406873 9.699371816211933e-07 6.013256392082944 0.09202897925922882 TRS(ph)FGHFPGPEFLDVEK ddPTM_KYSE-520_SHP099_60min_R1 1 TRSFGHFPGPEFLDVEK 17 1 Q1RLN5;Q8IWW6-3;Q8IWW6-2;Q8IWW6-4;Q8IWW6 Q1RLN5 ARHGAP12 Rho GTPase-activating protein 12 1 T(0.21)RS(0.79)FGHFPGPEFLDVEK 111.67 0.00010295 91581000.0 106620.0 138760.0 106190.0 118970.0 103160.0 123410.0 120960.0 115650.0 178290.0 132060.0 True False 100705.57605829934 132093.76131699362 113035.17731000723 130276.87303036536 111278.10509989082 122639.75241338492 133187.81725583714 115248.83714291286 145917.0303251503 130890.05114112515 0.7693906082267397 1.0091963458289939 0.8635887626641168 0.9953153191903129 0.8501647308542282 0.9369677171350114 1.017554933279341 0.880501123944493 1.11480612203156 1.0 16.997995917672338 -7.10069711020038 0.8043507552082549 1.0285079068318823 0.9027951620864508 0.26003058520524625 0.08359821576159696 0.9520700176744827 1.1418356057035843 0.06963158922380686 0.03367370578328646 7.930542371010907e-08 7.10069711020038 -0.12571274474543148 TRS(ph)LSSLR ddPTM_KYSE-520_SHP099_60min_R1 8 TRSLSSLR 8 1 O94915;H0Y9X0;A0A2C9F2R7;A0A286YEZ9 O94915 FRYL Protein furry homolog-like 1 T(0.001)RS(0.949)LS(0.046)S(0.004)LR;T(0.001)RS(0.914)LS(0.042)S(0.042)LR;T(0.022)RS(0.976)LS(0.001)SLR;T(0.019)RS(0.969)LS(0.012)SLR;T(0.01)RS(0.989)LS(0.002)SLR;T(0.049)RS(0.946)LS(0.005)SLR;T(0.063)RS(0.934)LS(0.003)SLR;T(0.004)RS(0.995)LS(0.001)SLR 145.28 0.00033977 10517610000.0 2884109.0 2627791.0 2977952.0 2246228.0 2486320.0 2265513.0 1979342.0 1987443.0 3332738.0 2078721.0 True False 2724121.724441247 2501547.9759652927 3169915.550811671 2459708.8337669256 2681979.2387743406 2251373.0930176205 2179433.2058763495 1980549.024105684 2727596.7906880993 2060305.149160466 1.3221933292508992 1.21416382276413 1.538566047899919 1.193856567688145 1.3017388418735907 1.0927376917613447 1.057820588743578 0.961289168700432 1.3238800047650912 1.0 20.974426598275116 -6.192524893429697 2.182393935393951 1.077914406541802 1.3257668282617012 0.44869588734099863 0.1251705317871029 0.2930379440841166 2.7408432280180572 0.04661896211530204 0.044966983438160066 6.419114265783125e-07 6.192524893429697 0.24785242171989919 TRS(ph)NPEGAEDR ddPTM_KYSE-520_SHP099_60min_R1 7 TRSNPEGAEDR 11 1 M0R3H9;M0QXG9;M0R3F4;M0R2A4;M0R2K3;M0R193;M0R0I0;J3KQS6;Q9NWV8-3;Q9NWV8;M0R2I2 M0R3H9 BABAM1 BRISC and BRCA1-A complex member 1 1 T(0.366)RS(0.634)NPEGAEDR;T(0.008)RS(0.992)NPEGAEDR;T(0.059)RS(0.941)NPEGAEDR;T(0.241)RS(0.759)NPEGAEDR;T(0.046)RS(0.954)NPEGAEDR;T(0.023)RS(0.977)NPEGAEDR;T(0.012)RS(0.988)NPEGAEDR 126.77 0.00011592 6213830000.0 1588100.0 1435414.0 1401598.0 1383621.0 1406097.0 1477420.0 1386084.0 1429850.0 1721650.0 1482122.0 True False 1500004.9272011379 1366454.5568396617 1491947.2497160907 1515119.9238391784 1516748.8343024557 1468198.8737588776 1526202.8975962296 1424890.1840795 1409041.7592646545 1468991.5521534658 1.0211120172898258 0.9301990571943792 1.0156268410999185 1.03140138663023 1.0325102496872633 0.9994603928161288 1.038946000308099 0.9699784740018991 0.9591898314180718 1.0 20.486394668621127 TRS(ph)PDVISSASTALS(ph)QDIPEIASEALSR ddPTM_KYSE-520_SHP099_60min_R1 1 TRSPDVISSASTALSQDIPEIASEALSR 28 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 2 T(0.431)RS(0.519)PDVIS(0.103)S(0.112)AS(0.086)T(0.028)ALS(0.721)QDIPEIASEALSR 72.072 0.014776 91521000.0 43522.0 51442.0 40648.0 39716.0 28174.0 45668.0 35518.0 37445.0 57318.0 50905.0 True False 41107.74790104394 48970.6491039838 43268.23511909954 43490.596698949215 30391.13351186823 45382.96907231555 39108.50606227538 37315.112034728685 46910.49606919608 50454.02130349073 0.8147566207611652 0.9705995248508705 0.8575775329945002 0.8619847452266458 0.6023530479178194 0.8994916143418615 0.7751315960928095 0.7395864803376334 0.9297672387106737 1.0 15.622681639632335 -5.538589073583493 24.9981435559572 0.8053426342485545 0.8849136560765152 0.035642990974347866 0.1103130521696847 552.1844408336107 878626.9785848843 0.031134254602153976 0.040206416889002915 2.8934163179478272e-06 5.538589073583493 0.07957102182796072 TRS(ph)PDVISSASTALSQDIPEIASEALSR ddPTM_KYSE-520_SHP099_60min_R1 5 TRSPDVISSASTALSQDIPEIASEALSR 28 1 Q6P2E9;Q6P2E9-2 Q6P2E9 EDC4 Enhancer of mRNA-decapping protein 4 1 T(0.233)RS(0.748)PDVIS(0.009)S(0.009)AS(0.001)TALSQDIPEIASEALSR;T(0.245)RS(0.755)PDVISSASTALSQDIPEIASEALSR;T(0.235)RS(0.76)PDVIS(0.004)S(0.001)ASTALSQDIPEIASEALSR;T(0.204)RS(0.796)PDVISSASTALSQDIPEIASEALSR;T(0.179)RS(0.821)PDVISSASTALSQDIPEIASEALSR 229.63 2.7171999999999994e-23 4132310000.0 606113.0 681463.0 585577.0 527038.0 477724.0 596272.0 471042.0 574218.0 728113.0 559377.0 True False 572490.70363369 648724.494583183 623324.2303763275 577127.533060248 515318.16092225903 592550.445272132 518659.5222869061 572226.171781489 595906.033435057 554421.3549687203 1.0325913648582117 1.17009290635961 1.1242788986933856 1.0409547321509807 0.9294702599457637 1.0687727663476507 0.9354970143892962 1.03211423343131 1.0748251814158154 1.0 19.080623302103362 -5.392713783608558 4.349460311957418 1.0063417086448183 1.1144303362843642 0.4042929178665645 0.05507363559170355 0.2116249610160792 6.481699378306647 0.015439206969624544 0.02335403026673395 4.048426102997694e-06 5.392713783608558 0.10808862763954585 TRS(ph)PS(ph)PTLGESLAPHK ddPTM_KYSE-520_SHP099_60min_R1 1 TRSPSPTLGESLAPHK 16 1 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 2 T(0.401)RS(0.605)PS(0.784)PT(0.21)LGESLAPHK 92.56299999999999 0.0019952999999999998 0.0 248780.0 319650.0 344310.0 596950.0 271080.0 251780.0 224040.0 224200.0 323740.0 247330.0 True False 234979.67746936507 304293.5341955679 366504.7735154782 653683.9485204386 292412.45376578515 250208.5476269511 246688.14961969087 223422.30252867332 264956.97682127013 245138.8486198281 0.9585574819835337 1.2413109383061494 1.495090539826552 2.6665865169914373 1.19284419997938 1.0206809285254714 1.006320095768523 0.9114112421861224 1.0808445022607447 1.0 17.903239609273584 -5.985832270779834 24.99977620414131 1.0105012711773735 1.6050292260160828 0.31066576261053214 0.4128202385738777 309.49905201277267 546125.8910578584 0.1368691066586404 0.1551293326954278 1.0331603464048386e-06 5.985832270779834 0.5945279548387092 TRS(ph)RSPES(ph)QVIGENTK ddPTM_KYSE-520_SHP099_60min_R1 1 TRSRSPESQVIGENTK 16 2 O95218-2 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 T(0.001)RS(0.997)RS(0.003)PES(0.999)QVIGENTK 204.17 3.8879999999999996e-12 394020000.0 859190.0 796530.0 741860.0 729050.0 729240.0 794940.0 735340.0 732270.0 1007500.0 697270.0 True False 811529.0179471984 758263.5031840948 789681.4826179689 798338.6928031257 786627.039191978 789978.4845919783 809675.3434268145 729729.926283102 824563.3970081842 691092.7302678515 1.174269359819005 1.09719502170166 1.14265632965334 1.1551831727324178 1.1382365994315982 1.1430860867047479 1.171587122777291 1.055907397550363 1.1931298954463065 1.0 19.398519777701317 -10.915478504307893 2.6169484275172756 0.9166481713544745 1.138753079281965 0.5577927407543748 0.037670975165298645 12854675.889977856 6417640.554012723 6560590.626584825 0.008798611594394979 1.214846748625044e-11 10.915478504307893 0.22210490792749038 TRS(ph)WDSSSPVDRPEPEAASPTTR ddPTM_KYSE-520_SHP099_60min_R1 1 TRSWDSSSPVDRPEPEAASPTTR 23 2 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 T(0.015)RS(0.528)WDS(0.21)S(0.21)S(0.036)PVDRPEPEAASPTTR 199.2 1.7656e-15 1182800000.0 343620.0 324590.0 337210.0 342550.0 291820.0 325250.0 276500.0 318810.0 473690.0 372640.0 True False 324558.71361051267 308996.20918047667 358947.0961550769 375105.8490085867 314784.5737713277 323219.9941046381 304451.3183799522 317704.1225208131 387679.8367531576 369338.6995095334 0.8787563124078611 0.8366201797721465 0.9718642986281802 1.0156147988464568 0.8522924193683159 0.8751316732686311 0.8243146975506521 0.8601972199033329 1.0496593973715196 1.0 18.494584911270493 -7.762902840513382 24.996973748254337 1.0248297484790287 0.890673757505591 0.466676831101579 0.05791895558841716 37.93430320976631 647836.9915938269 0.05150755519635251 0.016064375794624556 1.7262240361588376e-08 7.762902840513382 -0.13415599097343778 TRSWDS(ph)SSPVDRPEPEAASPTTR ddPTM_KYSE-520_SHP099_60min_R1 1 TRSWDSSSPVDRPEPEAASPTTR 23 2 C9J0I9;Q86WB0;Q86WB0-2 C9J0I9 ZC3HC1 Nuclear-interacting partner of ALK 1 T(0.118)RS(0.275)WDS(0.409)S(0.175)S(0.023)PVDRPEPEAASPTTR 78.48100000000001 0.0077057 655070000.0 131920.0 139120.0 146460.0 131830.0 125610.0 126450.0 137640.0 189150.0 176230.0 115880.0 True False 124602.13462399963 132436.4663766228 155901.04594428535 144359.08356386537 135494.792376864 125660.77864575418 151553.99443694958 188493.88279794168 144231.07439677627 114853.39335327575 1.0848798715135728 1.15309145433138 1.3573917269013704 1.2568987240963228 1.179719540023495 1.0940972223540333 1.319543027960759 1.6411694708762876 1.255784180038444 1.0 16.80943395633003 -6.96666943366929 12.915217152325274 1.3651344042136306 1.1974216122321153 0.0648721945187497 0.16619992026016644 1.9954538950351917 770.6343495793988 0.06790035629955456 0.045735526915386286 1.0797682828224114e-07 6.96666943366929 -0.16771279198151534 TRT(ph)PAS(ph)INATPANINLADLTR ddPTM_KYSE-520_SHP099_60min_R1 1 TRTPASINATPANINLADLTR 21 1 Q7KZ85;Q7KZ85-2 Q7KZ85;Q7KZ85-2 SUPT6H Transcription elongation factor SPT6 2 T(0.094)RT(0.907)PAS(1)INATPANINLADLTR 129.3 2.7518000000000003e-05 1127000000.0 708970.0 532960.0 561210.0 637660.0 547050.0 648810.0 546500.0 555510.0 685070.0 547360.0 True False 669642.0208033439 507355.8016107302 597386.4945677493 698263.0146805305 590099.7227112771 644760.5361261511 601745.553326017 553583.0654670085 560678.5572093258 542510.8162396365 1.2343385620307177 0.9351994216952575 1.1011513073757284 1.2870951025833475 1.0877197376478107 1.1884749885638208 1.1091862785279758 1.0204092690798652 1.033488255765327 1.0 19.049292375827527 -7.203934549482504 3.9342667716163153 1.0188675000185565 1.1334038880273352 0.26680757607830075 0.08941023450852122 0.34400656237844995 10.862090522863111 0.04779945435901519 0.025231560994865412 6.252669167674669e-08 7.203934549482504 0.11453638800877863 TRT(ph)SQEELLAEVVQGQSR ddPTM_KYSE-520_SHP099_60min_R1 2 TRTSQEELLAEVVQGQSR 18 1 H0YJA2;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-11;G3V5I6;A0A087WTC9;Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4 H0YJA2;Q6PJT7-5 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 T(0.301)RT(0.35)S(0.35)QEELLAEVVQGQSR;T(0.111)RT(0.444)S(0.444)QEELLAEVVQGQSR 238.72 3.9995e-23 796680000.0 338550.0 417480.0 384880.0 306150.0 351560.0 502270.0 473520.0 616860.0 720730.0 571860.0 True False 319769.95661730657 397423.63414974435 409689.9806297736 335246.4039526461 379225.7718972241 499135.1466224034 521388.02270985534 614720.256636206 589863.6001247725 566793.7653003475 0.564173384031242 0.7011785564351561 0.7228201961831326 0.5914786373399803 0.6690718831324302 0.8806292115050148 0.9198901869246368 1.084557195703206 1.0407023440213747 1.0 19.11246436321543 -6.546824030228223 1.5531975876696942 1.0400317641790133 0.6475906261779659 0.9081507960854616 0.05494618446304048 0.10976352068460726 0.5371568167869546 0.028375606244293392 0.02053428553506885 2.8390691447119356e-07 6.546824030228223 -0.3924411380010474 TRT(ph)WESVKR ddPTM_KYSE-520_SHP099_60min_R1 2 TRTWESVKR 9 2 C9JYY9;A6NCQ0;A6NJU6;Q9UKK9 C9JYY9 NUDT5 ADP-sugar pyrophosphatase 1 T(0.093)RT(0.902)WES(0.005)VKR;T(0.01)RT(0.611)WES(0.38)VKR 73.273 0.027507 1397100000.0 1511580.0 1429400.0 1344500.0 1293810.0 1324710.0 1330640.0 1019190.0 1128180.0 1684940.0 1121830.0 True False 1427729.6441399744 1360729.4784268567 1431168.6212760622 1416773.3134018376 1428957.1404311412 1322334.9821841535 1122219.6715358526 1124266.6068991905 1378997.369880863 1111891.458970532 1.284054871202867 1.2237970419223443 1.2871477784361611 1.274201093975114 1.2851588425314204 1.1892662467328106 1.0092888676156242 1.011129816520145 1.2402266055336342 1.0 20.084584530723898 -6.560535108041594 4.28445863141398 1.067017061673063 1.267534538941415 0.6793755497573586 0.06650072846662905 0.12447693939797251 5.116019471176002 0.025618598827453185 0.020019881443043723 2.7508372203751615e-07 6.560535108041594 0.200517477268352 TRTDS(ph)TSDGRPAWMR ddPTM_KYSE-520_SHP099_60min_R1 7 TRTDSTSDGRPAWMR 15 2 Q14204;A0A2R8Y706;A0A2R8Y5T0;A0A2R8Y542;A0A2R8Y6I5 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 TRTDS(0.827)T(0.067)S(0.105)DGRPAWMR;TRTDS(0.79)T(0.172)S(0.038)DGRPAWMR;TRTDS(0.884)T(0.113)S(0.003)DGRPAWMR;TRTDS(0.816)T(0.03)S(0.153)DGRPAWMR;T(0.008)RT(0.008)DS(0.911)T(0.037)S(0.037)DGRPAWMR;T(0.001)RT(0.002)DS(0.932)T(0.062)S(0.004)DGRPAWMR;TRTDS(0.959)T(0.02)S(0.02)DGRPAWMR 127.32 5.232899999999999e-05 12713030000.0 1932170.0 1947090.0 1830850.0 1570550.0 1737120.0 1908580.0 1406660.0 1749060.0 2441150.0 1816170.0 True False 1824988.6784145974 1853548.8737583268 1948869.5204635765 1719814.5997969226 1873821.461139225 1896667.8442681956 1548858.920478639 1742992.9190936731 1997898.6963836509 1800080.1467588777 1.0138374570157715 1.0297035257545182 1.0826570827818975 0.9554100148782394 1.04096557284581 1.0536574427995489 0.860438866162391 0.9682862856034535 1.1098943010848457 1.0 20.77962971185548 TRTDS(ph)YSAGQSVEILDGVELGEPAHK ddPTM_KYSE-520_SHP099_60min_R1 2 TRTDSYSAGQSVEILDGVELGEPAHK 26 1 P42345;B1AKQ2;B1AKP8 P42345 MTOR Serine/threonine-protein kinase mTOR 1 TRTDS(0.983)YS(0.016)AGQSVEILDGVELGEPAHK;T(0.232)RT(0.148)DS(0.577)YS(0.038)AGQS(0.004)VEILDGVELGEPAHK 310.75 1.8003999999999997e-61 352090000.0 286440.0 292390.0 249908.0 283050.0 266360.0 219586.0 276470.0 259090.0 345660.0 277650.0 True False 270550.6021960164 278343.14551366266 266017.4695469379 309950.98689791467 287321.01661891135 218215.48232270888 304418.28568718024 258191.27726206047 282896.85737950227 275190.23700843134 0.9831402637577118 1.0114571960819043 0.9666675403851177 1.126315345585528 1.0440814316029254 0.7929622965367886 1.1062103401504517 0.9382283327665797 1.0280047012381286 1.0 18.07006976253872 TRTDS(ph)YSAGQSVEILDGVELGEPAHKK ddPTM_KYSE-520_SHP099_60min_R1 2 TRTDSYSAGQSVEILDGVELGEPAHKK 27 2 P42345;B1AKQ2;B1AKP8 P42345 MTOR Serine/threonine-protein kinase mTOR 1 T(0.005)RT(0.005)DS(0.946)YS(0.044)AGQSVEILDGVELGEPAHKK;T(0.001)RT(0.006)DS(0.48)YS(0.24)AGQS(0.272)VEILDGVELGEPAHKK 228.34 3.9305999999999996e-23 1954400000.0 1250860.0 1388790.0 1405660.0 1436940.0 1058060.0 1002150.0 1043360.0 1042140.0 1666400.0 857200.0 True False 1181472.30227241 1322070.4437837114 1496271.09273552 1573506.3455682343 1141323.302462103 995895.2101213336 1148833.0110123213 1038525.059577305 1363823.766525496 849605.8748915091 1.3906122087765445 1.5560985191545833 1.7611355299615687 1.8520426848144902 1.3433561798379101 1.1721849383968832 1.3521952295339557 1.2223609679134104 1.6052428624032882 1.0 19.696434216623537 -5.896277885427796 7.3005063601140305 1.2861573674377949 1.6414175495340908 0.4807164556048955 0.1828393406858502 0.2067280271048978 12.934990950574907 0.05709750076266174 0.06489456016807431 1.269761382253254e-06 5.896277885427796 0.35526018209629595 TRTDST(ph)SDGRPAWMR ddPTM_KYSE-520_SHP099_60min_R1 1 TRTDSTSDGRPAWMR 15 2 Q14204;A0A2R8Y706;A0A2R8Y5T0;A0A2R8Y542;A0A2R8Y6I5 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 1 TRT(0.001)DS(0.4)T(0.539)S(0.059)DGRPAWMR 85.146 0.006567100000000001 943240000.0 320640.0 283430.0 202180.0 216200.0 198220.0 249990.0 216710.0 220930.0 324170.0 241120.0 True False 302853.4600200065 269813.59736289666 215212.8462994378 236747.5829970998 213818.78628247732 248429.71968091794 238617.16168578432 220163.64539544983 265308.89966068784 238983.86438852153 1.267254844986734 1.1290034080470577 0.9005329579471582 0.9906425423442556 0.8946996770245008 1.039525075538322 0.9984655754744134 0.9212489971185869 1.1101540279278819 1.0 17.86655368865745 -4.531251240805709 3.923297613122235 0.9792874182100754 1.2480028043221998 0.6773674823524296 0.06292079094917793 0.10925450768393982 3.70702149367963 0.015603798587854958 0.0573062714838146 2.9427187686710423e-05 4.531251240805709 0.2687153861121244 TRTFS(ph)ATVR ddPTM_KYSE-520_SHP099_60min_R1 3 TRTFSATVR 9 1 H3BTK3;I3L3X8;H3BSW7;H3BUY4;H3BPY5;H3BNU9;Q9Y2V2 H3BTK3 CARHSP1 Calcium-regulated heat stable protein 1 1 T(0.029)RT(0.098)FS(0.847)AT(0.026)VR;TRTFS(0.976)AT(0.024)VR;TRTFS(0.994)AT(0.006)VR 127.17 0.00098945 1673860000.0 2076430.0 2442810.0 2485920.0 1379890.0 1732960.0 1748050.0 1233640.0 1233370.0 2551630.0 1613540.0 True False 1961246.2886394185 2325453.7408674345 2646166.3808126324 1511034.3307209432 1869334.0928063858 1737139.771543778 1358348.3703661617 1229091.727340721 2088318.3133578063 1599245.2909151232 1.2263573948166204 1.454094474485999 1.654634467798519 0.9448421322887224 1.168885163161376 1.0862247220060586 0.849368372745925 0.7685448469492806 1.3058148898239523 1.0 20.60895980448171 -5.273315474345854 24.99246745874274 1.0101692975477583 1.4459353519875475 0.5618155980859417 0.1728664995939787 524.5005840979229 1103776.1800396487 0.049610200721316125 0.0742450032348412 5.329476182164006e-06 5.273315474345854 0.4357660544397892 TRTS(ph)QEELLAEVVQGQSR ddPTM_KYSE-520_SHP099_60min_R1 1 TRTSQEELLAEVVQGQSR 18 1 H0YJA2;Q6PJT7-9;Q6PJT7-2;Q6PJT7-3;Q6PJT7-11;G3V5I6;A0A087WTC9;Q6PJT7-5;Q6PJT7;G3V256;Q6PJT7-10;Q6PJT7-4 H0YJA2;Q6PJT7-5 ZC3H14 Zinc finger CCCH domain-containing protein 14 1 T(0.043)RT(0.134)S(0.823)QEELLAEVVQGQSR 139.78 1.1633e-05 307000000.0 181520.0 232180.0 191650.0 158950.0 194530.0 259800.0 226010.0 267750.0 395650.0 266610.0 True False 171450.72374885116 221025.7242907149 204004.065650842 174056.56020994 209838.40427570566 258178.49183208286 248857.29644503817 266821.2377433196 323809.9335248514 264248.04281944147 0.6488249521908551 0.8364327770697623 0.772017319311751 0.6586862795758583 0.7940963423486415 0.9770308573618997 0.9417564413715651 1.009737801258329 1.2254014450586037 1.0 18.011533260613767 -6.545577959473963 1.1287405208700645 1.0842656708307177 0.7332217168208742 0.7600484967722184 0.0829440822505425 0.24427947515080367 0.6366935255101515 0.051119541944260646 0.035441942999284666 2.847226653416939e-07 6.545577959473963 -0.35104395400984345 TRWS(ph)GAQPLEQPSGSVLWMAAEVIR ddPTM_KYSE-520_SHP099_60min_R1 1 TRWSGAQPLEQPSGSVLWMAAEVIR 25 1 Q96II5;P10398 Q96II5 ARAF Serine/threonine-protein kinase A-Raf 1 T(0.211)RWS(0.789)GAQPLEQPSGSVLWMAAEVIR 175.38 9.6389e-11 121590000.0 35185.0 47587.0 38782.0 43673.0 36740.0 42257.0 34999.0 44616.0 56836.0 32183.0 True False 33233.21791044142 45300.84909045677 41281.94977339394 47823.66878923375 39631.228977995255 41993.25838856173 38537.04047732348 44461.23750945268 46516.01511896487 31897.883657995124 1.0418627852168367 1.4201835324301282 1.2941908690875399 1.4992740365471509 1.2424407024276605 1.3164904242177278 1.208137846714613 1.3938616739016347 1.4582790387507651 1.0 14.961173087633632 TRYDS(ph)GQDLDEEGMNMGDFDPNNIFK ddPTM_KYSE-520_SHP099_60min_R1 1 TRYDSGQDLDEEGMNMGDFDPNNIFK 26 1 Q99615;A0A6I8PU73;A0A6I8PUD4;A0A6I8PS32;A0A6I8PRZ0;Q99615-2;A0A6I8PIK4;K7ER44 Q99615 DNAJC7 DnaJ homolog subfamily C member 7 1 T(0.068)RYDS(0.932)GQDLDEEGMNMGDFDPNNIFK 165.04 2.617e-10 58341000.0 81883.0 88216.0 81800.0 88332.0 81020.0 79114.0 56615.0 114090.0 105960.0 88038.0 True False 77340.78676028638 83977.97094508442 87072.95888462751 96727.04672201574 87395.81305925902 78620.22018015168 62338.19670915366 113694.24841880631 86720.33503423043 87258.05181252756 0.8863455595645403 0.9624094189669702 0.9978787868390907 1.1085171478482256 1.0015787797672522 0.9010081997827076 0.7144119701765312 1.3029656983756235 0.9938376256731883 1.0 16.413000642952365 -7.271007696268105 24.998597687263953 1.1113012100596802 0.9495323779531429 0.25312480668655335 0.12451422717398902 1014.8750286665343 2651490.6988830683 0.06798099220091346 0.03331019008250021 5.357871625776237e-08 7.271007696268105 -0.16176883210653725 TS(ph)DPALCTLIVSAAADSAVR ddPTM_KYSE-520_SHP099_60min_R1 2 TSDPALCTLIVSAAADSAVR 20 0 Q6IA86-4;Q6IA86-7;Q6IA86-2;Q6IA86-3;Q6IA86-5;Q6IA86;Q6IA86-6 Q6IA86-4 ELP2 Elongator complex protein 2 1 T(0.148)S(0.852)DPALCTLIVSAAADSAVR;T(0.123)S(0.877)DPALCTLIVSAAADSAVR 198.42 3.1264e-13 64903000.0 67495.0 67418.0 63194.0 62684.0 52614.0 61241.0 55971.0 64833.0 75191.0 60613.0 True False 63750.917802053176 64179.13808351897 67267.58635397506 68641.46851336818 56754.42246729022 60858.772202804495 61629.09490431933 64608.10945513597 61538.20981086081 60076.01597620042 1.061170864381363 1.0682988384073944 1.1197078444852873 1.1425769069067602 0.9447101567083597 1.0130294296964395 1.025851896183232 1.0754393147629993 1.024339061285949 1.0 15.874501521263841 -5.748438470226962 24.99998108726768 1.018221500304214 1.097376423617471 0.5490369965763732 0.03718947570801052 205.7607502874893 395664.1831173862 0.011881548682360856 0.015239176378813541 1.7846848203814105e-06 5.748438470226962 0.07915492331325691 TS(ph)DSDQQAYLVQR ddPTM_KYSE-520_SHP099_60min_R1 3 TSDSDQQAYLVQR 13 0 Q96CV9-3;Q96CV9-2;Q96CV9 Q96CV9-3 OPTN Optineurin 1 T(0.209)S(0.791)DSDQQAYLVQR;T(0.185)S(0.81)DS(0.005)DQQAYLVQR;T(0.037)S(0.963)DSDQQAYLVQR 210.37 3.8135999999999995e-11 2075140000.0 1249650.0 1182420.0 1153830.0 1172110.0 1331220.0 1544290.0 1535950.0 1776840.0 2145540.0 1717340.0 True False 1180329.4233844846 1125614.7683513956 1228207.727993273 1283506.9819922796 1435979.4403943082 1534651.5132847107 1691218.8154274388 1770676.5567575747 1755964.020661973 1702125.7036703008 0.6934443330708979 0.6612994363014598 0.7215728693508849 0.7540612184074585 0.843638890651789 0.901608800087758 0.9935921957941511 1.0402736724669968 1.0316300475784956 1.0 20.698906154741167 -6.121626144847461 0.8841118318884493 1.036025739704785 0.6744454795501021 0.9811561268567884 0.019356952559606375 0.06909577964356182 0.11782474298253269 0.011400010027939021 0.012270028375611215 7.557425160552602e-07 6.121626144847461 -0.3615802601546828 TS(ph)DVGGYYYEK ddPTM_KYSE-520_SHP099_60min_R1 6 TSDVGGYYYEK 11 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.348)S(0.652)DVGGYYYEK;T(0.194)S(0.806)DVGGYYYEK;T(0.047)S(0.953)DVGGYYYEK;T(0.111)S(0.889)DVGGYYYEK;T(0.183)S(0.817)DVGGYYYEK;T(0.197)S(0.803)DVGGYYYEK 254.18 5.011399999999999e-15 4937570000.0 8017580.0 7378190.0 6520970.0 7529230.0 6920510.0 6789960.0 7133100.0 7583180.0 8405460.0 7299020.0 True False 7572828.854750521 7023730.677511034 6941322.160120909 8244805.755454459 7465114.764684438 6747581.34103223 7854183.360347318 7556875.718507525 6879240.348403387 7234356.361351639 1.0467868150934774 0.9708853596201262 0.9594940881270078 1.1396737102281802 1.0318975720584609 0.9327134307455568 1.085678250840255 1.0445816242726018 0.9509125628859809 1.0 22.7864332356192 -7.757828679198522 24.9770238196288 0.9754562792429752 1.0251824993974687 0.10688399253155889 0.058885147923500504 207.40560385974493 1434809.367323296 0.04434886662783312 0.015307638529707316 1.746510981962626e-08 7.757828679198522 0.04972622015449357 TS(ph)ESPSKPGEK ddPTM_KYSE-520_SHP099_60min_R1 1 TSESPSKPGEK 11 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;E9PSG1;F8W7E0;H0YA91;H0Y944;D6RGF7;D6RBR1;E7EN75 P20810-6 CAST Calpastatin 1 T(0.329)S(0.397)ES(0.274)PSKPGEK 70.41199999999999 0.016413999999999998 3869900000.0 8346600.0 7175300.0 5976900.0 5894800.0 5892700.0 5850400.0 5652300.0 5736600.0 6633500.0 5676600.0 True False 7883597.459465405 6830587.8176551275 6362180.537378127 6455040.019663751 6356421.965123371 5813885.483504308 6223689.645132012 5716701.073532506 5429023.616926836 5626309.740327968 1.401202177505047 1.2140440418157568 1.1307910212933394 1.1472955307447177 1.1297675134310758 1.0333390360349066 1.1061761496211584 1.0160658295359453 0.9649350760078075 1.0 22.423757547596157 -1.0000000000000202 0.3369669995507999 1.0041833130711664 5.048320961227134 0.8915786796015563 0.039719034638855885 18.835274583027285 0.2676233348870891 0.03672045538943796 47.77409713198462 0.09999999999999534 1.0000000000000202 4.044137648155967 TS(ph)FGSLTDSSEEALEGMVR ddPTM_KYSE-520_SHP099_60min_R1 1 TSFGSLTDSSEEALEGMVR 19 0 G3V160;Q969H4-2;Q969H4 G3V160 CNKSR1 Connector enhancer of kinase suppressor of ras 1 1 T(0.179)S(0.821)FGSLTDSSEEALEGMVR 141.86 2.7506e-06 38702000.0 64728.0 62479.0 49555.0 50530.0 49297.0 61822.0 52014.0 55926.0 80463.0 61951.0 True False 61137.408807931 59477.41505710906 52749.3945908034 55332.35600760155 53176.39343843855 61436.14596629345 57272.08272772086 55732.00575922651 65852.94750716572 61402.16233714864 0.9956882051194887 0.9686534283683508 0.8590804066665536 0.9011467007266155 0.8660345403872942 1.0005534598107182 0.9327372285889505 0.9076554251169806 1.0724858050695119 1.0 15.906001841955176 -7.756139964311298 24.99999219976781 1.0362429170774619 0.9274284581380137 0.4351895982948476 0.04887107698097523 111.93947385519358 528094.3336079916 0.03655939986388493 0.012885802751901503 1.7533153527682843e-08 7.756139964311298 -0.10881445893944819 TS(ph)FSFQK ddPTM_KYSE-520_SHP099_60min_R1 1 TSFSFQK 7 0 Q9BPZ7-3;Q9BPZ7-2;Q9BPZ7;H0Y7F8;Q9BPZ7-4 Q9BPZ7-3 MAPKAP1 Target of rapamycin complex 2 subunit MAPKAP1 1 T(0.204)S(0.796)FSFQK 82.749 0.011553 513620000.0 1244000.0 1162900.0 1095800.0 1200400.0 1149200.0 992280.0 1276600.0 1204200.0 1210700.0 1104500.0 True False 1174992.8401474818 1107032.538451514 1166437.021341992 1314485.655086579 1239635.5019464379 986086.812452422 1405651.1864153577 1200022.9112623916 990867.3992633333 1094714.9892879962 1.0733321929863209 1.0112518320147685 1.0655166255653847 1.2007560579229137 1.1323819570175961 0.9007703576743513 1.2840339267936716 1.0961966566684975 0.9051373270295627 1.0 20.062123880189624 -7.749415520217989 24.804156308360064 0.9525686787379991 1.0962476765916134 0.24846808191363645 0.0994464834344817 247.23436994527867 510030.02363837406 0.06835774276435191 0.025390278176466233 1.7806742552824254e-08 7.749415520217989 0.14367899785361427 TS(ph)FSVGS(ph)DDELGPIR ddPTM_KYSE-520_SHP099_60min_R1 1 TSFSVGSDDELGPIR 15 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 2 T(0.163)S(0.837)FS(0.003)VGS(0.997)DDELGPIR 191.91 4.4306000000000004e-11 160850000.0 188140.0 189220.0 179330.0 187520.0 188740.0 199090.0 192670.0 219710.0 240630.0 176090.0 True False 177703.49915220818 180129.58717498978 190889.89873814496 205341.84442005618 203592.76421629888 197847.4054613143 212146.9638779942 218947.87729069975 196937.6577886644 174529.9795959469 1.0181832345572277 1.032083929603421 1.0937370140079818 1.176541960845017 1.1665203003382858 1.1336012639166602 1.2155330813029033 1.2545001024900386 1.128388705737509 1.0 17.41311534869104 -4.9736505891411324 2.3105426706405954 1.166785316532472 1.0205990470722772 0.38174189389149504 0.06387036690778293 0.27222740059390094 2.880760728523633 0.017562292527090084 0.04480878300216832 1.0625500861941352e-05 4.9736505891411324 -0.14618626946019475 TS(ph)FYLPK ddPTM_KYSE-520_SHP099_60min_R1 3 TSFYLPK 7 0 Q9NS23-4;Q9NS23-2;Q9NS23-5;Q9NS23;Q9NS23-3 Q9NS23-4 RASSF1 Ras association domain-containing protein 1 1 T(0.081)S(0.919)FYLPK;T(0.079)S(0.921)FYLPK;T(0.124)S(0.876)FYLPK 105.78 0.0066848 306960000.0 1227700.0 1278600.0 1140050.0 1144290.0 1420760.0 1276720.0 1218610.0 1232480.0 1388620.0 1255500.0 True False 1159597.033640725 1217174.1367822716 1213539.447144496 1253042.9775566678 1532565.728981397 1268751.5169047636 1341798.9912874973 1228204.814542995 1136481.612261541 1244377.246764219 0.9318693640984278 0.9781391776065625 0.975218287139281 1.0069639097106464 1.2315925359183166 1.0195875247670476 1.0782895579106788 0.987003593754806 0.9132934688550106 1.0 20.24699249010585 -5.370336651250214 4.3851329221872115 1.0444755346863208 0.9635510194317365 0.15195713180053338 0.07821077389151405 0.4305964458766135 13.69716180542288 0.023701659470478316 0.03604322947895049 4.262489760747045e-06 5.370336651250214 -0.08092451525458433 TS(ph)IIEAQYLR ddPTM_KYSE-520_SHP099_60min_R1 2 TSIIEAQYLR 10 0 A0A3B3IUD7;Q14690 A0A3B3IUD7 PDCD11 Protein RRP5 homolog 1 T(0.037)S(0.963)IIEAQYLR;T(0.084)S(0.916)IIEAQYLR 139.46 0.00025035 239546000.0 514970.0 458650.0 422810.0 404960.0 415030.0 430090.0 416840.0 467570.0 507110.0 449340.0 True False 486403.5875327563 436615.76555231446 450065.0091199188 443447.2766443369 447690.4998023231 427405.648776215 458978.25516636274 465948.108801658 415031.6072027989 445359.1971812299 1.0921601947625756 0.9803676859392275 1.0105663293100782 0.9957070145873399 1.0052346569597048 0.9596874870472045 1.0305799410258745 1.0462299010568088 0.9319030791990363 1.0 18.764609862107196 -4.254900836148295 24.785224465450597 0.9977760500073761 1.0921602429509425 0.4614656794393923 0.031217557033631108 611.9120614623173 2319467.4367562016 0.007481653917091583 0.07056200606994553 5.560312031645145e-05 4.254900836148295 0.09438419294356637 TS(ph)LADSSIFDSK ddPTM_KYSE-520_SHP099_60min_R1 9 TSLADSSIFDSK 12 0 Q9H8V3-2;Q9H8V3-4;Q9H8V3;Q9H8V3-3;C9J0L6;C9JDV9;C9JTI2;C9J1C4;C9JDB4 Q9H8V3-2 ECT2 Protein ECT2 1 T(0.011)S(0.989)LADSSIFDSK;T(0.379)S(0.621)LADSSIFDSK;T(0.214)S(0.786)LADSSIFDSK;T(0.205)S(0.795)LADSSIFDSK;T(0.172)S(0.828)LADSSIFDSK;T(0.183)S(0.817)LADSSIFDSK;T(0.188)S(0.812)LADSSIFDSK;T(0.086)S(0.914)LADSSIFDSK;T(0.114)S(0.886)LADSSIFDSK 302.63 2.488e-30 2616802000.0 4939820.0 4708250.0 4660350.0 4309570.0 4488790.0 4920840.0 4640070.0 5036140.0 5405390.0 5409560.0 True False 4665798.33731297 4482058.6027726745 4960763.617823646 4719150.237080539 4842032.23527859 4890127.21226708 5109133.558319217 5018670.8057839135 4423907.434793118 5361635.506973999 0.8702192327777714 0.8359498882277173 0.9252332821526325 0.8801699091522046 0.9030886618421656 0.9120588682140707 0.9529057974331998 0.9360335664847073 0.8251040991202859 1.0 22.354241715135732 TS(ph)LASLR ddPTM_KYSE-520_SHP099_60min_R1 3 TSLASLR 7 0 Q9HDC5 Q9HDC5 JPH1 Junctophilin-1 1 T(0.101)S(0.899)LASLR;T(0.144)S(0.856)LASLR;T(0.174)S(0.826)LASLR 185.72 0.0001134 1449500000.0 2350180.0 2301940.0 2132850.0 2594720.0 2411840.0 2456960.0 2421440.0 2689900.0 3070240.0 2339650.0 True False 2219810.83043232 2191351.347117616 2270336.923680658 2841321.408668983 2601638.086507566 2441625.201276962 2666222.786177036 2680569.3647273793 2512761.810452015 2318922.5212201583 0.9572595936772875 0.9449868751822645 0.9790482014405829 1.2252765595523007 1.121916779323291 1.0529136609498453 1.14976794687135 1.155954690248526 1.0835902396298533 1.0 21.145023187445748 -5.108051121104572 6.992127873780656 1.1184528472377522 0.9537898476555733 0.5939001302357856 0.05786762621556226 0.15723147169092663 8.878831641870669 0.015286837411194886 0.026748977467755217 7.797383215826488e-06 5.108051121104572 -0.1646629995821789 TS(ph)LSALTQLMK ddPTM_KYSE-520_SHP099_60min_R1 2 TSLSALTQLMK 11 0 O00186 O00186 STXBP3 Syntaxin-binding protein 3 1 T(0.194)S(0.806)LSALTQLMK;T(0.267)S(0.733)LSALTQLMK 115.34 0.0002667 206020000.0 728040.0 593310.0 499580.0 517850.0 474250.0 518110.0 528830.0 598290.0 639000.0 550650.0 True False 687654.1698882408 564806.4970235339 531783.7261562627 567066.3083027205 511570.7768866156 514876.28330685385 582289.2972834357 596214.6716319353 522973.707879136 545771.6693992168 1.2599667744667062 1.0348769067571253 0.9743703383168424 1.0390174867943307 0.9373347968936362 0.9433913707423245 1.066910083340195 1.0924251020362525 0.9582280231856362 1.0 19.05793798176769 -4.266934301392306 3.7328495716477805 1.003964516561567 1.285579274792373 0.7107462552449664 0.049139080708016404 0.14603114532585468 3.8933303437851947 0.013135359316894293 0.11298827216774301 5.408361326275501e-05 4.266934301392306 0.2816147582308062 TS(ph)LSSLR ddPTM_KYSE-520_SHP099_60min_R1 2 TSLSSLR 7 0 Q9BR39 Q9BR39 JPH2 Junctophilin-2 1 T(0.314)S(0.686)LSSLR;T(0.249)S(0.751)LSSLR 165.26 0.0019546 0.0 772600.0 607990.0 502570.0 676790.0 623560.0 662030.0 582510.0 663310.0 847420.0 517380.0 True False 729742.3378600838 578781.2477884046 534966.4663404315 741111.9181156672 672630.6244289256 657898.0252024401 641395.7955497494 661009.1324277184 693549.8897197772 512796.41571554955 1.4230644277062872 1.1286764689663062 1.0432336302389051 1.4452361510396463 1.3116913531666274 1.2829614346746507 1.2507805746940603 1.2890283788457348 1.3524858373902762 1.0 18.968026652447534 -10.104682350980632 4.618815907571764 0.9999798980485942 1.2745024341737266 0.3446065936013024 0.1158796147110626 2.453087235696666e-05 4.754973862141493e-06 0.11474309877587935 0.027827252715092666 7.858101769540035e-11 10.104682350980632 0.27452253612513233 TS(ph)MTEEYRVPDGMVGLIIGR ddPTM_KYSE-520_SHP099_60min_R1 2 TSMTEEYRVPDGMVGLIIGR 20 1 A0A087WTP3;Q92945 A0A087WTP3 KHSRP Far upstream element-binding protein 2 1 T(0.18)S(0.818)MT(0.002)EEYRVPDGMVGLIIGR;T(0.215)S(0.784)MT(0.001)EEYRVPDGMVGLIIGR 115.54 5.2966999999999996e-05 61570000.0 38508.0 44291.0 42715.0 35055.0 41815.0 33686.0 35801.0 48324.0 55562.0 34328.0 True False 36371.88447620517 42163.19387785364 45468.477246416485 38386.61666032996 45105.60260519521 33475.75317881276 39420.114464089216 48156.37532290637 45473.34140403842 34023.88062677986 1.069010465772009 1.239223542439407 1.3363695266032851 1.1282257036287693 1.3257042340341694 0.9838899197308002 1.1586013628634129 1.4153698648061612 1.3365124896496023 1.0 15.054260077920649 TS(ph)NERPGSGQGQGR ddPTM_KYSE-520_SHP099_60min_R1 2 TSNERPGSGQGQGR 14 1 Q8TAD8 Q8TAD8 SNIP1 Smad nuclear-interacting protein 1 1 T(0.249)S(0.751)NERPGSGQGQGR;T(0.149)S(0.851)NERPGSGQGQGR 53.278 0.046043 350166000.0 58386.0 48463.0 52593.0 54017.0 50570.0 50679.0 50877.0 49124.0 50522.0 55869.0 True False 55147.212190394595 46134.764735553974 55983.22893177526 59150.75943919673 54549.57129605936 50362.693562579436 56020.14367167023 48953.600309627815 41348.47835597762 55374.04412542425 0.9959036415235292 0.8331478306163992 1.0110012699265958 1.0682037112048035 0.985110843132616 0.9095000077745105 1.0116679133057818 0.8840531892297068 0.7467122730339469 1.0 15.756922269426358 -7.406399587117429 5.624366053293389 0.8555914912532839 0.970768968881772 0.2143506720653683 0.08315180735591504 0.31010261158904645 13.008029343560493 0.04680775671825276 0.021743624649582457 3.922838354825083e-08 7.406399587117429 0.11517747762848807 TS(ph)PADGKPR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPADGKPR 9 1 H0Y951;A0A087WX55;A0A087WY90;H0Y3A4;A0A087WZ65;A0A087WTF3;Q12955-6;Q12955-7;Q12955-5;Q12955-4;Q12955 H0Y951 ANK3 Ankyrin-3 1 T(0.111)S(0.889)PADGKPR 136.48 0.00030895 566900000.0 503320.0 351270.0 313060.0 319650.0 353200.0 419280.0 468610.0 324300.0 451140.0 447790.0 True False 475399.83625645563 334394.4619329809 333240.3485137104 350029.43989372277 380994.8305669 416663.11799598084 515981.67199287226 323175.0789921886 369224.34831391793 443822.9289753487 1.0711475347927795 0.7534411588535892 0.75084076724711 0.7886691223949011 0.8584388180360588 0.9388048493977732 1.1625845315926242 0.7281621968885226 0.831918146199305 1.0 18.75962467704278 -6.12641027494771 4.3284100962038075 0.9291340336388094 0.8280069007412862 0.09304503174122802 0.13482137979558897 0.5798255785435942 17.729952786513458 0.047086620445589235 0.04740066201830021 7.474630437820949e-07 6.12641027494771 -0.10112713289752318 TS(ph)PAPWK ddPTM_KYSE-520_SHP099_60min_R1 7 TSPAPWK 7 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.013)S(0.987)PAPWK;T(0.003)S(0.997)PAPWK;T(0.01)S(0.99)PAPWK;T(0.327)S(0.673)PAPWK;TS(1)PAPWK;T(0.288)S(0.712)PAPWK;T(0.011)S(0.989)PAPWK 135.0 0.0018363 20097210000.0 22777000.0 18474900.0 16659850.0 19338200.0 20565200.0 20543900.0 20020700.0 21374200.0 20972700.0 20163800.0 True False 21513514.405176166 17587338.072609726 17733770.587702483 21176096.713758186 22183564.240018208 20415677.899727218 22044587.739202537 21300057.8889758 17164586.35874298 19985164.419198994 1.076474226277015 0.880019683786751 0.8873467446015264 1.0595908179476927 1.110001587913247 1.021541653173223 1.1030476045533621 1.0657934777115787 0.8588664070360916 1.0 24.252426106161153 -5.274308660174164 24.303376362916456 1.0398712108083719 0.9411541627906447 0.16666280519992493 0.08342839244387878 778.9101761296176 1470954.2781812828 0.02351250718413097 0.035147170299217934 5.317302156019586e-06 5.274308660174164 -0.09871704801772718 TS(ph)PAPWKR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPAPWKR 8 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.019)S(0.981)PAPWKR 117.7 0.0006411 519850000.0 748440.0 793390.0 699740.0 621810.0 676700.0 608230.0 588400.0 660890.0 810910.0 637620.0 True False 706922.5412218501 755274.3534973317 744846.3600235858 680906.6354460059 729952.4401036855 604433.8109585367 647881.2142306111 658597.5268428859 663669.1853775748 631971.1828608529 1.1185993291999516 1.195108849866067 1.178608107812387 1.0774330442784248 1.155040704228449 0.9564262221931417 1.0251752481778291 1.0421322122023016 1.0501573542850942 1.0 19.269499249149955 -6.2462828375770965 24.995345302161073 1.0180612859033675 1.145862236715468 0.7409389826519588 0.0384614820250196 440.15828042447026 725885.575468449 0.013245659995518381 0.01319474058336912 5.671751080093669e-07 6.2462828375770965 0.12780095081210052 TS(ph)PCQS(ph)PTISEGPVPSLPIRPSR ddPTM_KYSE-520_SHP099_60min_R1 5 TSPCQSPTISEGPVPSLPIRPSR 23 1 A0A0D9SGJ6;J3KQV8;O43426;J3KPK1;C9JFZ1;O43426-4;O43426-2 A0A0D9SGJ6 SYNJ1 Synaptojanin-1 2 T(0.404)S(0.595)PCQS(0.899)PT(0.099)IS(0.003)EGPVPSLPIRPSR;T(0.476)S(0.529)PCQS(0.793)PT(0.165)IS(0.036)EGPVPSLPIRPSR;T(0.436)S(0.564)PCQS(0.625)PT(0.375)IS(0.001)EGPVPSLPIRPSR;T(0.441)S(0.559)PCQS(0.983)PT(0.017)ISEGPVPSLPIRPSR;T(0.464)S(0.536)PCQS(0.499)PT(0.499)IS(0.001)EGPVPSLPIRPSR 182.02 9.2359e-12 6915210000.0 2628060.0 2404082.0 2321429.0 2377579.0 2635560.0 2732420.0 2558820.0 2793490.0 2880490.0 2529945.0 True False 2482276.272892274 2288586.292119348 2471072.0277577285 2603543.3933148077 2842963.5777148935 2715365.9532402633 2817490.4972766344 2783800.0351954647 2357465.6272437745 2507531.655567427 0.9899281898918089 0.9126849055077894 0.9854599531261159 1.0382893422438786 1.133769765738635 1.0828840175203314 1.123611138077165 1.1101754304934273 0.9401538848012292 1.0 21.257836483139446 -5.265135581078895 2.8155722038695497 1.074725541710631 0.9521070430362053 0.37257119255591653 0.058808436114247416 0.2508965041558015 3.9836443725490365 0.017011004103119842 0.030180833044925977 5.430807622868906e-06 5.265135581078895 -0.12261849867442565 TS(ph)PDSLRR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPDSLRR 8 1 Q9BRL6-2;Q9BRL6 Q9BRL6-2 SRSF8 Serine/arginine-rich splicing factor 8 1 T(0.394)S(0.606)PDSLRR 103.26 0.0018158000000000002 0.0 605880.0 565050.0 477160.0 454000.0 548370.0 566390.0 495030.0 487080.0 552620.0 601060.0 True False 572270.6286081645 537904.1498426591 507918.49708299316 497148.02349992306 591523.5992015043 562854.9499182969 545072.4634272254 485390.4331653261 452278.13841653836 595735.0760176041 0.9606126139721438 0.9029250945545533 0.8525912230623534 0.8345119223519285 0.9929306213690607 0.9448074699258843 0.9149578149249656 0.8147756489513515 0.7591934009324196 1.0 19.184311379811522 -7.24908198928786 23.540748947150558 0.8402383962684422 0.9129914155255999 0.09980849557000449 0.07233473760928948 602.6557908670978 1148059.8854831436 0.03436218348680863 0.019627516252788756 5.635312582315365e-08 7.24908198928786 0.07275301925715771 TS(ph)PDTLR ddPTM_KYSE-520_SHP099_60min_R1 5 TSPDTLR 7 0 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.104)S(0.896)PDTLR;T(0.322)S(0.678)PDTLR;T(0.043)S(0.957)PDTLR;T(0.321)S(0.679)PDTLR;T(0.049)S(0.951)PDTLR 182.53 8.8933e-06 33760100000.0 35195100.0 29457700.0 27941600.0 27938400.0 31096400.0 30570100.0 29781400.0 32335000.0 35991300.0 29348400.0 True False 33242757.643307567 28042507.875090867 29742760.2441407 30593657.136013746 33543509.76568678 30379300.666497152 32791994.550454598 32222837.432045735 29456187.18683932 29088396.008709706 1.142818518881342 0.9640444893109377 1.0224957139346929 1.0517478216005218 1.1531577662667654 1.0443786813614928 1.1273221988808166 1.107755732643268 1.0126439140205423 1.0 24.793940409804787 -3.9288393834895303 20.140552208124024 1.0607164427255618 3.3695578615421655 0.17167698986415914 0.05687312539195163 643.4624092742088 208765.362363529 0.014103406740501657 9721.969966905903 0.00011780415718303463 3.9288393834895303 2.3088414188166038 TS(ph)PDTLRR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPDTLRR 8 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 T(0.352)S(0.647)PDT(0.001)LRR 85.29 0.009437899999999999 8406800000.0 496490.0 467380.0 456720.0 392340.0 426290.0 407840.0 348170.0 384030.0 515290.0 366140.0 True False 468948.70997172256 444926.36324831727 486160.9019778378 429627.8756386775 459836.59774168796 405294.5192794336 383366.4214117461 382697.88956327597 421726.3254038186 362896.2844526095 1.2922389400571623 1.2260427629327797 1.3396689985712031 1.1838861240663445 1.2671295283039412 1.1168329262196148 1.0564076785465404 1.0545654666609086 1.162112546949738 1.0 18.4691977601622 -6.349843002560094 3.080361007502595 1.0731389233904447 1.2614546427808715 0.7500542458942818 0.053500002964317596 0.132214723694921 2.4308654499700912 0.01941676776984758 0.017046955927278246 4.4684509744410695e-07 6.349843002560094 0.1883157193904268 TS(ph)PENVQDR ddPTM_KYSE-520_SHP099_60min_R1 2 TSPENVQDR 9 0 P49792 P49792 RANBP2 E3 SUMO-protein ligase RanBP2 1 T(0.128)S(0.872)PENVQDR;T(0.007)S(0.993)PENVQDR 193.62 4.8422e-08 2099200000.0 1568970.0 1396070.0 1449160.0 1368450.0 1550020.0 1576780.0 1409410.0 1440660.0 1749800.0 1507030.0 True False 1481936.1064358486 1329000.701656208 1542575.1723379823 1498507.0765605038 1671997.755592604 1566938.7311431551 1551886.9173160503 1435662.6867125724 1432080.4288684053 1493678.886651599 0.9921383502701344 0.8897499412577542 1.0327354735501382 1.0032324149133072 1.1193823321294611 1.049046582331885 1.038969574508037 0.9611588538490475 0.9587605754264359 1.0 20.51043859802105 -4.780945685275884 24.998590412343727 1.0236302714074688 0.9409441354350219 0.2906268376682888 0.04945661112578511 263.96307699765447 338285.9497725568 0.013785207015602962 0.028763170030986624 1.655977054087601e-05 4.780945685275884 -0.0826861359724469 TS(ph)PGGRT(ph)SPEAR ddPTM_KYSE-520_SHP099_60min_R1 3 TSPGGRTSPEAR 12 1 Q8TD16;Q8TD16-2 Q8TD16 BICD2 Protein bicaudal D homolog 2 2 T(0.446)S(0.554)PGGRT(0.554)S(0.446)PEAR;T(0.123)S(0.877)PGGRT(0.989)S(0.01)PEAR;T(0.434)S(0.566)PGGRT(0.765)S(0.235)PEAR 109.83 0.0003131 1420200000.0 725610.0 687980.0 675860.0 592420.0 654050.0 617250.0 556770.0 575650.0 840320.0 621200.0 True False 685358.9668323254 654928.4081209659 719427.017014234 648723.4186824328 705520.0139645556 613397.5137927381 613053.7451515582 573653.2045077196 687739.0707433412 615696.6512862864 1.113143892208125 1.0637192954561605 1.168476416935578 1.0536412977513332 1.1458889901229998 0.9962657950327567 0.9957074541022648 0.9317140239585006 1.1170096009236805 1.0 19.23186019633429 -6.272798372624255 24.718109615039953 1.0030944987644494 1.1066914824202 0.47221507157348586 0.05314036875081903 535.5266532816464 1165346.767440611 0.017649609712102575 0.015694462166149167 5.335825612674571e-07 6.272798372624255 0.10359698365575065 TS(ph)PGMAQK ddPTM_KYSE-520_SHP099_60min_R1 1 TSPGMAQK 8 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 T(0.092)S(0.908)PGMAQK 93.598 0.0038114000000000004 460760000.0 1596300.0 1424900.0 1439100.0 1261800.0 1334100.0 1422800.0 1339600.0 1298000.0 1747600.0 1398900.0 True False 1507750.0568548425 1356445.665181497 1531866.688641413 1381721.0926259973 1439086.0800093496 1413919.7774391375 1475019.8412361073 1293497.5409554762 1430279.893410919 1386506.8343277327 1.0874450954912864 0.9783187731917592 1.1048389021350624 0.9965483461146761 1.0379220962925226 1.0197712282642273 1.0638388536694745 0.9329182582663912 1.031570748877275 1.0 20.40302329700804 -7.239881808131615 24.881235953936443 0.9866833592382936 1.0385942006573385 0.2430634017077128 0.0427208380507807 976.8830322719048 1127497.3200428882 0.018449518793441727 0.01063749302082277 5.755965628060035e-08 7.239881808131615 0.051910841419044895 TS(ph)PGRPLGTTK ddPTM_KYSE-520_SHP099_60min_R1 1 TSPGRPLGTTK 11 1 Q7Z6I8;Q7Z6I8-2 Q7Z6I8 C5orf24 UPF0461 protein C5orf24 1 T(0.177)S(0.823)PGRPLGTTK 68.972 0.016931 1055500000.0 2573400.0 2316100.0 2002800.0 1832000.0 2136800.0 2122500.0 1935000.0 2275500.0 2702000.0 2031100.0 True False 2430648.3720542807 2204831.0794630223 2131903.6925933 2006112.729189115 2304954.0032711034 2109252.6901986026 2130608.6837801333 2267606.8216056945 2211384.9118770324 2013106.0341718902 1.2074119945967727 1.0952384236282913 1.059012121768478 0.9965261119563174 1.144973967662497 1.0477603536001834 1.0583688328452003 1.1264219485281586 1.0984940059487258 1.0 20.940991733111066 -3.075027576411102 0.009360494698523817 2.77493844876821e-07 2.2460945872485114 0.21223212228961996 0.054988323856628 19929.579860451657 21.289844137013276 2323.960531932762 2803.519643891976 0.0008413417172461811 3.075027576411102 2.2460943097546666 TS(ph)PHWK ddPTM_KYSE-520_SHP099_60min_R1 1 TSPHWK 6 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 T(0.116)S(0.884)PHWK 116.9 0.011411 746310000.0 3338300.0 2934800.0 2776800.0 3062900.0 3160100.0 2932000.0 2876100.0 3022200.0 3589200.0 2894000.0 True False 3153117.8442639397 2793807.8027753932 2955796.9710370917 3353997.0951055354 3408781.891490548 2913700.3004298243 3166844.2560310327 3011716.6935867826 2937491.7563690054 2868361.4114979305 1.0992749489741958 0.9740082932284312 1.030482755481465 1.1693077035763055 1.1884073875162042 1.015806546814551 1.1040604030359016 1.0499781099809136 1.0241009883182655 1.0 21.451795383366075 -9.525209302947822 8.599344167485288 1.000003690369315 1.0734803708944847 0.1018617013973866 0.06484753990572711 0.0 0.0 0.06688427236953992 0.016221818804246706 2.983944196687311e-10 9.525209302947822 0.07347668052516965 TS(ph)PINLGLNVNDLLK ddPTM_KYSE-520_SHP099_60min_R1 1 TSPINLGLNVNDLLK 15 0 P50616 P50616 TOB1 Protein Tob1 1 T(0.185)S(0.815)PINLGLNVNDLLK 269.59 3.2711999999999996e-25 1114900000.0 747810.0 954640.0 730220.0 569430.0 691770.0 826160.0 603650.0 697950.0 1019100.0 667280.0 True False 706327.4885777233 908777.6614561467 777291.1495933108 623548.4559946285 746208.3633671143 821003.6289915082 664672.8330562675 695528.9743527554 834057.1294203867 661368.4183359839 1.0679788586743488 1.3740868724010884 1.1752770892039126 0.9428155906861849 1.1282794017358577 1.2413710818807613 1.0049963297742543 1.051651326355619 1.2611081906796988 1.0 19.33509463003857 -1.0000000000002311 0.053329607075279964 0.8386779816647761 1.6823921626971565 0.08244614683130413 0.12434079093306956 1091.3292389164374 4.388724710568355 15.562050491332052 74.14926502476207 0.09999999999994677 1.0000000000002311 0.8437141810323804 TS(ph)PITR ddPTM_KYSE-520_SHP099_60min_R1 2 TSPITR 6 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.123)S(0.877)PITR;T(0.054)S(0.946)PITR 134.81 0.0066173000000000004 5589300000.0 5462300.0 4585400.0 4227800.0 4457300.0 4519500.0 4661300.0 4581300.0 4227200.0 4906700.0 4225000.0 True False 5159295.330174907 4365110.501174276 4500330.752719175 4880920.451863893 4875158.937562587 4632207.097678555 5044422.5131792985 4212536.829835901 4015766.9678412452 4187569.787000265 1.2320499938153224 1.0423970759186298 1.0746879411275325 1.1655735188022514 1.164197657719484 1.1061802747881613 1.2046181364759616 1.0059621795231073 0.958973144831554 1.0 21.99768180289126 -7.388151080766768 5.822832893759701 0.9808914586828142 1.1351499360749746 0.6210730408802833 0.05482597540735558 0.15660411211212136 6.711378464474167 0.0308801102519484 0.014436510324525899 4.0911831239827954e-08 7.388151080766768 0.15425847739216036 TS(ph)PLKDNPS(ph)PEPQLDDIK ddPTM_KYSE-520_SHP099_60min_R1 1 TSPLKDNPSPEPQLDDIK 18 1 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 2 T(0.066)S(0.934)PLKDNPS(1)PEPQLDDIK 60.133 0.053320000000000006 0.0 113840.0 112160.0 84419.0 91227.0 110430.0 128130.0 108060.0 137440.0 139550.0 141740.0 True False 107525.0682655863 106771.66524440784 89860.78381517562 99897.18665160221 119120.21273924931 127330.29314258973 118983.75936396956 136963.25271873703 114211.23776922286 140484.2938720512 0.7653885377643486 0.7600256391768051 0.6396500372989601 0.7110914956983413 0.8479254830275929 0.9063667519912102 0.8469541760471553 0.9749364070796339 0.8129822531851352 1.0 17.100049320758448 -5.878998980827166 3.4008077295923247 0.9012969085832594 0.7156610964122829 0.6857688213398125 0.060364086261388616 0.1402164472319572 3.177589726142807 0.019093343456574773 0.022156336064109904 1.3212987349171895e-06 5.878998980827166 -0.18563581217097647 TS(ph)PLKDNPS(ph)PEPQLDDIKR ddPTM_KYSE-520_SHP099_60min_R1 14 TSPLKDNPSPEPQLDDIKR 19 2 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 2 T(0.423)S(0.577)PLKDNPS(1)PEPQLDDIKR;T(0.367)S(0.633)PLKDNPS(1)PEPQLDDIKR;T(0.469)S(0.531)PLKDNPS(1)PEPQLDDIKR;T(0.464)S(0.536)PLKDNPS(1)PEPQLDDIKR;T(0.452)S(0.548)PLKDNPS(1)PEPQLDDIKR;T(0.459)S(0.541)PLKDNPS(1)PEPQLDDIKR;T(0.467)S(0.533)PLKDNPS(1)PEPQLDDIKR;T(0.393)S(0.607)PLKDNPS(1)PEPQLDDIKR;T(0.438)S(0.562)PLKDNPS(1)PEPQLDDIKR;T(0.439)S(0.561)PLKDNPS(1)PEPQLDDIKR;T(0.444)S(0.556)PLKDNPS(1)PEPQLDDIKR;T(0.444)S(0.556)PLKDNPS(1)PEPQLDDIKR;T(0.449)S(0.551)PLKDNPS(1)PEPQLDDIKR;T(0.475)S(0.525)PLKDNPS(1)PEPQLDDIKR 180.42 9.468e-10 44579970000.0 27873430.0 25635600.0 23668470.0 23043280.0 24734420.0 24698890.0 23399340.0 24048300.0 30548920.0 24262840.0 True False 26327235.27359487 24404027.29617991 25194177.447090935 25233306.40298522 26680878.13440132 24544735.065921966 25764773.642751362 23964882.060215387 25002006.20360418 24047890.113803882 1.0947835818029876 1.0148094980761575 1.0476668567538516 1.0492939831133414 1.1094893567850288 1.0206606463089618 1.071394351887942 0.9965482188584667 1.0396756673988883 1.0 24.519406986236785 -7.2597870082290035 24.998328842394177 1.0135839567595832 1.0563928912562723 0.3359392861135121 0.02967516149049522 176.10231927903286 2664267.617106132 0.014325441019819493 0.007694507571943391 5.4981045220935374e-08 7.2597870082290035 0.0428089344966891 TS(ph)PLKDNPSPEPQLDDIKR ddPTM_KYSE-520_SHP099_60min_R1 4 TSPLKDNPSPEPQLDDIKR 19 2 Q96JC9-2;Q96JC9 Q96JC9-2 EAF1 ELL-associated factor 1 1 T(0.098)S(0.902)PLKDNPSPEPQLDDIKR;T(0.203)S(0.797)PLKDNPSPEPQLDDIKR;T(0.002)S(0.998)PLKDNPSPEPQLDDIKR;T(0.142)S(0.858)PLKDNPSPEPQLDDIKR 242.9 2.2075e-26 20225500000.0 2748620.0 2557250.0 2352370.0 2266060.0 2495810.0 2423100.0 2163190.0 2118150.0 3009130.0 2307730.0 True False 2596148.5693618716 2434395.8714894922 2504007.534125079 2481425.661084218 2692216.047783622 2407976.534096692 2381866.355899922 2110802.6320299273 2462747.8459942797 2287285.307586774 1.135034864584063 1.0643166654438614 1.0947508497603913 1.0848780660871178 1.177035518417278 1.0527661442626302 1.0413507873282921 0.922841861934991 1.0767121346101896 1.0 21.12520490279043 -6.699887194951736 2.646073780039014 0.9998168993092764 1.1062054094296723 0.5057718615678846 0.04664197838595922 0.21825221560533414 3.113387164624924 0.019934337526489796 0.013968151898888633 1.9957806381449484e-07 6.699887194951736 0.10638851012039585 TS(ph)PLNSSGSSQGR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPLNSSGSSQGR 13 0 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 T(0.055)S(0.945)PLNSSGSSQGR 144.88 6.431899999999999e-05 911610000.0 2052100.0 1903300.0 1826800.0 1897000.0 1956900.0 1931700.0 1822000.0 2043400.0 2402500.0 1780100.0 True False 1938265.922240068 1811862.6110884564 1944558.4509833457 2077290.3096461538 2110896.896762082 1919643.543772269 2006185.5410064093 2036311.9223331467 1966266.5620964384 1764329.6988968446 1.098584875293987 1.0269410599511712 1.1021514018605423 1.1773821587569429 1.1964299518859371 1.0880299441609667 1.1370808654758724 1.154156121504025 1.1144552876516536 1.0 20.7506887506947 -4.995150970785429 20.865287271160287 1.1329935970868588 1.0632085489504621 0.15431276095476432 0.053924562890677576 24.668318077679757 106118.77261496043 0.01343758416624056 0.02768801163207179 1.0112278670078005e-05 4.995150970785429 -0.06978504813639663 TS(ph)PLVSQNNEQGSTLR ddPTM_KYSE-520_SHP099_60min_R1 4 TSPLVSQNNEQGSTLR 16 0 A0A1W2PNZ9;Q15652-3;Q15652;H7BXU7 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 1 T(0.114)S(0.886)PLVSQNNEQGSTLR;T(0.115)S(0.885)PLVSQNNEQGSTLR;T(0.27)S(0.73)PLVSQNNEQGSTLR;T(0.048)S(0.952)PLVSQNNEQGSTLR 209.66 1.0859e-12 2155960000.0 2754820.0 2627210.0 2233520.0 2218040.0 2319490.0 2783380.0 2595590.0 2755900.0 3227910.0 2832540.0 True False 2602004.643002479 2500994.8880773927 2377496.2729583546 2428841.8547219583 2502020.66690719 2766007.892977611 2857977.5677172504 2746340.4261318943 2641802.9129892667 2807445.899282776 0.9268227194216703 0.8908434847190919 0.8468538159776253 0.8651428885388173 0.8912088626699401 0.985239962659387 1.0179991601787888 0.97823449664106 0.9409986898284215 1.0 21.42082679084997 -6.2391439896474274 5.007980641819021 0.9856384360340686 0.8805817191206842 0.7835428511915505 0.026368933408881925 0.0917605833666205 6.670976681518441 0.009656608129315512 0.009294495762107304 5.76575269081914e-07 6.2391439896474274 -0.10505671691338447 TS(ph)PPCS(ph)PANLSR ddPTM_KYSE-520_SHP099_60min_R1 4 TSPPCSPANLSR 12 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 2 T(0.03)S(0.97)PPCS(1)PANLSR;T(0.163)S(0.837)PPCS(1)PANLSR;T(0.18)S(0.82)PPCS(1)PANLSR;T(0.477)S(0.523)PPCS(1)PANLSR 185.95 6.884299999999999e-08 3248400000.0 2687880.0 2315590.0 2231110.0 2141900.0 2379990.0 2218480.0 2120930.0 2283550.0 2710480.0 2140420.0 True False 2538777.93824406 2204345.5806285506 2374930.92050222 2345465.532014282 2567281.672709277 2204633.643416628 2335334.302682069 2275628.898034576 2218325.1576404385 2121457.5440215636 1.1967139975996874 1.0390712681668186 1.1194807679253183 1.1055915488971206 1.2101499178921027 1.039207053485214 1.1008159504597332 1.0726723730330967 1.0456608777733287 1.0 21.016624376096853 -7.658791736506914 0.7015703937741844 1.0008513167796385 1.1224421478883735 0.3831472251710669 0.051205845930322645 0.7263221979680314 0.7854546768331531 0.048262590249989204 0.020855576430745155 2.1938567348816307e-08 7.658791736506914 0.12159083110873503 TS(ph)PPCSPANLSR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPPCSPANLSR 12 0 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 T(0.416)S(0.584)PPCSPANLSR 99.844 0.0014744 887040000.0 1322500.0 1496900.0 1182600.0 1069400.0 1104700.0 1341100.0 1120200.0 1325800.0 1693500.0 1384600.0 True False 1249138.2886616106 1424986.6771072918 1258832.2882269023 1171035.4544731646 1191633.6051168025 1332729.6974442147 1233440.7480984537 1321201.109244048 1386003.0896609004 1372333.5212025007 0.910229378910062 1.0383676089604326 0.9172932590933555 0.853316949838149 0.8683265304724461 0.971141254551894 0.8987908034321404 0.9627405356143686 1.009960820928153 1.0 20.388199714763704 -7.547531636579821 3.699267097973329 1.003655829117138 0.923937701884159 0.3094140778513982 0.04938615789474807 0.31285239771074536 9.135332529627172 0.03924278024077612 0.014017497303528357 2.8344471480670065e-08 7.547531636579821 -0.079718127232979 TS(ph)PPLLDR ddPTM_KYSE-520_SHP099_60min_R1 9 TSPPLLDR 8 0 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 T(0.005)S(0.995)PPLLDR;T(0.007)S(0.993)PPLLDR;T(0.114)S(0.886)PPLLDR;T(0.117)S(0.883)PPLLDR;T(0.146)S(0.854)PPLLDR;T(0.149)S(0.851)PPLLDR;T(0.108)S(0.892)PPLLDR;T(0.01)S(0.99)PPLLDR;T(0.137)S(0.863)PPLLDR 192.64 5.0427e-06 150533170000.0 26283300.0 22480400.0 22317200.0 20380960.0 21940700.0 21412900.0 21290360.0 21846880.0 26252500.0 21166400.0 True False 24825312.954540443 21400407.84023167 23755802.420782506 22317960.31064096 23667308.264493775 21279254.148388036 23442597.362690043 21771098.272380147 21485707.77166979 20978882.16321002 1.1833477475780756 1.0200928568901952 1.1323674081378026 1.0638298140488742 1.1281491587763604 1.0143178260329222 1.1174378682483168 1.037762551074309 1.0241588471929441 1.0 24.3224344717474 -1.000000000002881 0.06287364484122286 0.8854848828895848 1.4762478355792896 0.36388436316156336 0.04784944456185808 353.3859218480463 1.6583522096530388 3.026463629976364 18.90504695641378 0.09999999999933662 1.000000000002881 0.5907629526897048 TS(ph)PQELSEELSR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPQELSEELSR 12 0 A0A1B0GVY1;Q96PU5-9;Q96PU5-4;Q96PU5-2;Q96PU5-6;Q96PU5-5;Q96PU5-7;Q96PU5;Q96PU5-3;K7ERN1 A0A1B0GVY1 NEDD4L E3 ubiquitin-protein ligase NEDD4-like 1 T(0.058)S(0.942)PQELSEELSR 125.47 0.00071965 212540000.0 459160.0 463540.0 411210.0 384630.0 416130.0 447120.0 401540.0 445670.0 517730.0 439480.0 True False 433689.47948723304 441270.8426122748 437717.2545592631 421185.11955677374 448877.0635441803 444329.3582292572 442131.5818527518 444124.0747901596 423723.28291121294 435586.5491102663 0.995644792919092 1.013049745254116 1.0048915776975873 0.9669378460310377 1.0305117650236475 1.0200713477880552 1.0150257916729855 1.0196000673054118 0.9727648472541556 1.0 18.732599878832467 -5.797233429106403 24.999997838481335 1.0114309108261812 0.9971079093879432 0.12289921562264605 0.018360910829377367 387.79304401508625 270848.1017067856 0.00576397764348107 0.00653606119213926 1.5950216080265566e-06 5.797233429106403 -0.014323001438237948 TS(ph)PQVLGSILK ddPTM_KYSE-520_SHP099_60min_R1 2 TSPQVLGSILK 11 0 Q7Z417 Q7Z417 NUFIP2 Nuclear fragile X mental retardation-interacting protein 2 1 T(0.009)S(0.991)PQVLGSILK;T(0.395)S(0.605)PQVLGSILK 255.08 3.3148e-15 1561630000.0 1973540.0 1755090.0 1688300.0 1604790.0 1610110.0 1815580.0 1645890.0 1843120.0 2081870.0 1795770.0 True False 1864063.802045546 1670772.8419562036 1797130.5193755084 1757308.7591022942 1736816.4967272703 1804248.2917647925 1812272.6235384434 1836726.6469074413 1703854.8876718886 1779860.8748879174 1.0473087129143905 0.9387097977876594 1.0097028058379443 0.9873292816849837 0.9758158748428257 1.0137018669385667 1.0182102708744396 1.031949560115537 0.9572966694822059 1.0 20.763333044811557 -6.2767634811228925 24.582411327228694 1.007102183351891 0.9895745160258353 0.03176377335610092 0.03136130490440118 1887.7959560935008 3028330.7982967533 0.010469756510163108 0.009269698202806178 5.287331239984981e-07 6.2767634811228925 -0.017527667326055596 TS(ph)PRPAS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPRPASPAR 10 1 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 2 T(0.458)S(0.542)PRPAS(1)PAR 66.533 0.05004 0.0 403510.0 332570.0 327960.0 325060.0 334970.0 346710.0 318070.0 304920.0 385940.0 339220.0 True False 381126.4959227572 316592.8380022531 349100.82635455317 355953.60466714774 361330.23328141164 344546.0542844553 350223.6196640557 303862.30368886277 315863.0247556707 336214.7747091665 1.1335804509258713 0.9416386840111746 1.0383268452629228 1.058708990332313 1.0747006391791396 1.0247796355246304 1.0416663573663805 0.9037743922815725 0.9394680082958861 1.0 18.359023598568577 -7.247444512286816 24.218011074640856 0.9412159036870691 1.0414753774173247 0.439009993358782 0.0500008164045917 439.0666019671095 759803.4448918223 0.022837621498510187 0.01309234275069031 5.656600241279422e-08 7.247444512286816 0.10025947373025557 TS(ph)PSGGTWSSVVSGAK ddPTM_KYSE-520_SHP099_60min_R1 3 TSPSGGTWSSVVSGAK 16 0 F8WB06;F8VRK6 F8WB06 ATXN2 1 T(0.008)S(0.98)PS(0.012)GGTWSSVVSGAK;T(0.225)S(0.772)PS(0.003)GGTWSSVVSGAK;T(0.113)S(0.878)PS(0.009)GGTWSSVVSGAK 254.72 8.8499e-24 1305530000.0 2565020.0 2465970.0 2280670.0 2063820.0 2034540.0 2288630.0 2066670.0 2396330.0 2814260.0 2197950.0 True False 2422733.227359398 2347501.099703569 2427685.637401024 2259964.83228989 2194646.72305091 2274345.8112458074 2275589.172355497 2388017.6905376245 2303261.3257213403 2178477.872979223 1.1121220267645586 1.0775877638331002 1.114395361785792 1.0374054564984991 1.0074220859767444 1.0440068450800826 1.0445775927223293 1.0961863419213165 1.057280110250313 1.0 21.054889029051772 -5.267148867793363 24.899203421213063 1.0438678386539133 1.098990322814657 0.5171317157292634 0.026608095603134083 405.53224570399897 1768534.2144896977 0.007868760534672146 0.012018269219152687 5.405689945321236e-06 5.267148867793363 0.05512248416074361 TS(ph)PSGGTWSSVVSGVPR ddPTM_KYSE-520_SHP099_60min_R1 7 TSPSGGTWSSVVSGVPR 17 0 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4 Q99700 ATXN2 Ataxin-2 1 T(0.225)S(0.748)PS(0.025)GGT(0.001)WS(0.001)SVVSGVPR;T(0.31)S(0.687)PS(0.003)GGTWSSVVSGVPR;T(0.204)S(0.796)PSGGTWSSVVSGVPR;T(0.054)S(0.946)PSGGTWSSVVSGVPR;T(0.047)S(0.953)PSGGTWSSVVSGVPR;T(0.009)S(0.99)PS(0.001)GGTWSSVVSGVPR;T(0.161)S(0.839)PSGGTWSSVVSGVPR 403.51 1.0599999999999998e-87 10282790000.0 9623740.0 8346080.0 7653640.0 7560400.0 7468390.0 7809440.0 7364130.0 8236630.0 9959360.0 7493260.0 True False 9089891.957749927 7945121.789078521 8147005.880656977 8278938.142882852 8056109.803673657 7760698.388195313 8108568.127382838 8208059.052973903 8150991.279034666 7426875.546068061 1.2239187127031232 1.0697798475005857 1.0969627577737138 1.1147269254115737 1.0847239533909687 1.0449479515385154 1.0917872633096268 1.1051833307371652 1.0974993762148022 1.0 22.82432397225075 -1.0000020916427153 0.012417877000381817 0.016687378312914013 2.347807923986306 0.44440561843081494 0.040390674442683856 8622.978306993993 8.291814306968083 646.8820002637159 934.0625162650767 0.09999951838262618 1.0000020916427153 2.331120545673392 TS(ph)PTFR ddPTM_KYSE-520_SHP099_60min_R1 3 TSPTFR 6 0 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750 H7BY10 RPL23A 60S ribosomal protein L23a 1 T(0.204)S(0.795)PTFR;T(0.129)S(0.871)PTFR;T(0.452)S(0.548)PTFR 127.84 0.007510800000000001 7813100000.0 8053800.0 6771700.0 6865800.0 6460200.0 7119000.0 6856500.0 6499100.0 6829600.0 8069400.0 6977800.0 True False 7607039.659147735 6446377.367471072 7308380.4536684165 7074175.46567005 7679224.798430814 6813706.040210464 7156092.4531036075 6805909.7116406225 6604200.373020182 6915982.120646261 1.099921822590961 0.9320986166558645 1.0567379044909226 1.022873590802315 1.1103592612690607 0.9852116331922732 1.0347181829375391 0.9840843415894556 0.9549186591018913 1.0 22.72150270862127 -7.311774538504371 4.041425994659612 0.9750508387691071 1.0322586261033697 0.20290094199317832 0.049671415583734 0.3691517285253746 12.752724305298365 0.027903248866714706 0.012896867909734005 4.8778165343827725e-08 7.311774538504371 0.05720778733426257 TS(ph)PTPGDFPK ddPTM_KYSE-520_SHP099_60min_R1 2 TSPTPGDFPK 10 0 Q9UPU7;C9JW56;Q9UPU7-2 Q9UPU7 TBC1D2B TBC1 domain family member 2B 1 T(0.009)S(0.991)PTPGDFPK;T(0.343)S(0.657)PTPGDFPK 178.46 1.9471e-05 748460000.0 4714940.0 4142970.0 3785440.0 3718820.0 3994700.0 3918390.0 3832560.0 4214230.0 4639890.0 4066920.0 True False 4453392.879200132 3943935.502475248 4029455.5193181536 4072255.5346960006 4309060.1632661335 3893933.8745570313 4219992.566981083 4199611.819738681 3797402.938108489 4030890.2528158864 1.1048162068141385 0.978427904287423 0.9996440653533719 1.010262070978295 1.0690095470239915 0.966023292704836 1.0469132877118383 1.0418571472654037 0.9420754969589439 1.0 21.942667073457432 -4.249394870610239 24.131424345631434 1.0092608707866202 1.1048163027906936 0.3904924801929647 0.03682853655595588 1198.9643457169652 2402079.7352300202 0.008870074044894998 0.13657528232631916 5.631254163090173e-05 4.249394870610239 0.09555543200407346 TS(ph)PTPPESATTVK ddPTM_KYSE-520_SHP099_60min_R1 6 TSPTPPESATTVK 13 0 Q5M775-4;Q5M775;J3KSG2 Q5M775-4 SPECC1 Cytospin-B 1 T(0.016)S(0.984)PTPPESATTVK;T(0.109)S(0.891)PTPPESATTVK;T(0.177)S(0.823)PTPPESATTVK;T(0.115)S(0.885)PTPPESATTVK;T(0.005)S(0.995)PTPPESATTVK;T(0.077)S(0.915)PT(0.008)PPESATTVK 227.95 7.5391e-12 7517060000.0 13309350.0 13980370.0 11646600.0 10170040.0 11380280.0 13224120.0 10644510.0 13623370.0 16295100.0 13685830.0 True False 12571053.823968563 13308732.040236795 12397358.47121888 11136597.543865984 12275843.291064229 13141583.361841753 11720560.95120646 13576113.709188474 13336320.606042733 13564584.193614637 0.9267555602541974 0.9811382236472621 0.913950497432482 0.8210054495521065 0.9049922294590447 0.9688157907581121 0.8640560435847175 1.0008499719128334 0.9831720910634801 1.0 23.69334148838831 -7.281443545079502 24.754399613088168 0.9940082911378125 0.9127709064031309 0.4320571712366216 0.0436655015813969 787.3974227012326 974368.7627338292 0.0253608845526944 0.012208992851438866 5.23065956287898e-08 7.281443545079502 -0.08123738473468167 TS(ph)PVIMAR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPVIMAR 8 0 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 T(0.248)S(0.752)PVIMAR 161.27 0.0052817 0.0 539290.0 435580.0 362870.0 403360.0 423080.0 437370.0 434390.0 495020.0 474780.0 438120.0 True False 509374.50865203835 414654.08298109064 386261.1808125281 441695.2131253942 456373.98900408903 434640.2115958358 478302.3804378571 493302.8911585366 388571.92022982135 434238.5976522021 1.1730290936965841 0.9548991849711217 0.8895136980013442 1.0171717012571149 1.0509751815512631 1.0009248692903052 1.1014736668363767 1.1360180643214983 0.8948350568805103 1.0 18.728128441215667 -5.52100891584978 24.726330800530967 1.0390565545268826 0.9928258864155346 0.004128528388586239 0.09044545488193666 220.8653209284971 2920700.8160534883 0.026678302653639557 0.0350015699969766 3.0129441693054532e-06 5.52100891584978 -0.04623066811134802 TS(ph)PYGSSLDLSTGSSSRPPPK ddPTM_KYSE-520_SHP099_60min_R1 1 TSPYGSSLDLSTGSSSRPPPK 21 1 J3KNZ9 J3KNZ9 FBRS 1 T(0.454)S(0.546)PYGSSLDLSTGSSSRPPPK 119.83 6.076e-05 725140000.0 283730.0 266010.0 205510.0 213050.0 223590.0 170800.0 231460.0 222420.0 295570.0 216380.0 True False 267990.9312982677 253230.48031084976 218757.503427626 233298.20794418172 241185.26094692302 169733.97384495678 254858.23563191216 221648.47693321804 241901.9387133586 214463.04154109288 1.2495902761265205 1.1807651262016103 1.0200242515245233 1.0878247658325775 1.1246005801923216 0.791436942352766 1.1883550368424634 1.0335043061055738 1.1279423110625248 1.0 17.710369523656155 -4.620595203293392 3.81064327934775 1.048151131349692 1.237362173749447 0.3136738135797932 0.10160912350076319 0.25271911235312366 6.747140646181336 0.025747524490189924 0.0808986595744998 2.3955475553775595e-05 4.620595203293392 0.18921104239975484 TS(ph)PYILR ddPTM_KYSE-520_SHP099_60min_R1 3 TSPYILR 7 0 P49454 P49454 CENPF Centromere protein F 1 T(0.27)S(0.73)PYILR;T(0.269)S(0.731)PYILR;T(0.029)S(0.971)PYILR 169.09 0.0006693 3403100000.0 4560700.0 3983900.0 3863800.0 3566500.0 3662800.0 3615200.0 3268950.0 3413400.0 4258400.0 3579700.0 True False 4307708.879469947 3792507.4640441905 4112866.7302985806 3905459.0876926742 3951041.5215188046 3592636.1958096484 3599407.3678775593 3401559.712093549 3485181.9055281873 3547986.6429644614 1.2141277047961805 1.0689181909871632 1.1592114469918475 1.1007536049880764 1.1136010135082068 1.012584476024938 1.0144929308048731 0.9587295709916857 0.9822984853787954 1.0 21.758569147687727 -6.285387420417943 1.2623685035587566 0.978601914336456 1.1387955879496656 0.7780282534278321 0.03720593824707744 0.19690296003934685 0.640008491686772 0.01732620893559298 0.015290884002871397 5.183374401328681e-07 6.285387420417943 0.16019367361320958 TS(ph)QETADVK ddPTM_KYSE-520_SHP099_60min_R1 2 TSQETADVK 9 0 H3BVG0;Q8N1F7;H3BM93;H3BNN5;H3BV11;H3BRI8 H3BVG0 NUP93 Nuclear pore complex protein Nup93 1 T(0.261)S(0.739)QETADVK;T(0.382)S(0.618)QETADVK 128.57 0.00063672 549170000.0 4222800.0 3780900.0 3554200.0 3936100.0 4114500.0 4086300.0 3973700.0 4064800.0 4544400.0 4196200.0 True False 3988552.8660568977 3599259.888753396 3783309.4189210627 4310185.760568383 4438287.741697369 4060795.8859639755 4375400.375574738 4050700.15753145 3719251.5150014795 4159024.9325941997 0.9590115305149254 0.8654095484126735 0.9096625964589292 1.0363452565022004 1.0671462214411345 0.9763817124873657 1.052025521964249 0.9739542857236054 0.8942604517356402 1.0 21.987813903027412 -5.246587697642183 23.252685562859075 1.0029103344551449 0.9067660180121716 0.3915382831310522 0.05045817589709919 320.1603654982729 501258.9757019485 0.014163751897014333 0.024369053056451862 5.66777109937577e-06 5.246587697642183 -0.09614431644297328 TS(ph)QGFGFTLR ddPTM_KYSE-520_SHP099_60min_R1 2 TSQGFGFTLR 10 0 Q5T5U3;A0A087WW76;A0A452Q6Z5;E7ESW5;Q5T5U3-3;A0A1B0GW11;H0Y5T2 Q5T5U3 ARHGAP21 Rho GTPase-activating protein 21 1 T(0.05)S(0.95)QGFGFTLR;T(0.257)S(0.743)QGFGFTLR 91.024 0.00352 347200000.0 349820.0 352010.0 349870.0 375660.0 347050.0 327440.0 366360.0 392490.0 408420.0 355470.0 True False 330414.787251119 335098.9112222181 372423.1800117929 411362.6134537026 374360.8605556139 325396.3255022988 403395.2441290384 391128.5437978549 334261.2234303547 352320.8123514749 0.9378236416005351 0.9511186948783593 1.0570569973603035 1.1675796576085538 1.0625567591566287 0.9235796299699823 1.1449656959992807 1.1101488475442816 0.9487410669821459 1.0 18.426530174899543 -4.751294555222384 6.006443371307598 1.0592592962871674 0.942673690492859 0.2442622178766275 0.07473569730046607 0.19984537484966078 26.02127055672759 0.01968811227659878 0.04880090546264766 1.7729865653194965e-05 4.751294555222384 -0.11658560579430843 TS(ph)RDTSPS(ph)SGSAVSSSK ddPTM_KYSE-520_SHP099_60min_R1 1 TSRDTSPSSGSAVSSSK 17 1 F8W0Q9;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8;F8WF16;B7Z8L1;F8W6A0;Q8NEY8-5;Q8NEY8-6;Q8NEY8-3;Q8NEY8-7 F8W0Q9 PPHLN1 Periphilin-1 2 T(0.157)S(0.843)RDT(0.001)S(0.012)PS(0.589)S(0.396)GS(0.002)AVSSSK 228.23 3.968500000000001e-18 389150000.0 609820.0 537460.0 482030.0 479020.0 511740.0 528680.0 477310.0 529410.0 645760.0 447140.0 True False 575992.0689539682 511639.61485609313 513102.4250752687 524545.9167773852 552011.0265976939 525380.3120161118 525561.15289669 527573.600275223 528506.2622848687 443178.6874696556 1.2996835931858892 1.154477029970276 1.1577777532688793 1.1835991477214274 1.24557214100123 1.185481898996067 1.1858899530963458 1.1904308920797233 1.19253537507048 1.0 18.75752897806861 -12.797339837410917 0.3874189048671082 4.509535210272834e-08 1.2015287180960752 0.6875469665646239 0.04050570549836246 132.9841261876886 2.4567099678304065 108.66448218372418 0.026641381834767174 1.5946308529941889e-13 12.797339837410917 1.201528673000723 TS(ph)S(ph)EDNLYLAVLR ddPTM_KYSE-520_SHP099_60min_R1 5 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 2 T(0.394)S(0.607)S(0.999)EDNLYLAVLR;T(0.44)S(0.564)S(0.997)EDNLYLAVLR;T(0.462)S(0.583)S(0.955)EDNLYLAVLR;T(0.458)S(0.556)S(0.986)EDNLYLAVLR;T(0.461)S(0.581)S(0.956)EDNLY(0.002)LAVLR 146.0 9.136e-06 326269000.0 438990.0 481957.0 425555.0 420738.0 474736.0 447873.0 415496.0 433006.0 537515.0 461093.0 True False 414638.3495951308 458803.06228779483 452986.956212074 460724.8130205074 512095.02232165326 445077.658476946 457498.39053018665 431504.0032503601 439915.82565047557 457008.07474492537 0.907288891616537 1.0039276932773482 0.9912012090046861 1.008132762813122 1.1205382368954293 0.9738945175648412 1.001072882105059 0.9441933897802569 0.9625996781260601 1.0 18.801860130511283 -9.989353766283816 13.63854233716441 1.0000154712259537 0.9935737786761989 0.0 0.05266040244928224 0.0 0.0 0.052915141488555494 0.012833806914812805 1.0248167939974181e-10 9.989353766283816 -0.006441692549754796 TS(ph)S(ph)EEEDSRREEPSLLLVLK ddPTM_KYSE-520_SHP099_60min_R1 3 TSSEEEDSRREEPSLLLVLK 20 2 A0A087WZV0;O43314-2;O43314;D6RBU4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 2 T(0.508)S(0.545)S(0.811)EEEDS(0.062)RREEPS(0.075)LLLVLK;T(0.468)S(0.546)S(0.984)EEEDS(0.002)RREEPSLLLVLK;T(0.481)S(0.535)S(0.592)EEEDS(0.382)RREEPS(0.009)LLLVLK 86.625 0.0015152999999999998 1432658000.0 1649650.0 1795440.0 1676900.0 1514870.0 1529840.0 1475200.0 1250100.0 1475490.0 2223270.0 1458630.0 True False 1558140.6260042533 1709184.3673896184 1784995.6571348663 1658842.7893377286 1650229.7044010966 1465992.7296023457 1376472.307800282 1470371.8695719547 1819580.2120758176 1445707.6729969676 1.0777701848771482 1.1822475589732888 1.2346864379813045 1.1474261500590432 1.1414684553621774 1.0140312298151721 0.9521097062083375 1.017060293056243 1.2586086703848007 1.0 20.463344433263813 -6.141539556371053 4.492118811072269 1.0437830397795667 1.1649090558788517 0.2914860715847397 0.08442601929035434 0.2988259355301201 9.65417510053477 0.02930821467556217 0.02940185719263249 7.21872410424624e-07 6.141539556371053 0.12112601609928508 TS(ph)S(ph)KES(ph)SPIPS(ph)PTSDRK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 4 T(0.469)S(0.547)S(0.894)KES(0.546)S(0.546)PIPS(0.964)PT(0.03)S(0.006)DRK 95.835 0.00098926 2023000000.0 508610.0 384370.0 399640.0 433810.0 380910.0 397970.0 431100.0 473260.0 508730.0 431510.0 True False 480396.3894111017 365904.28824886767 425401.4338466085 475039.1719702674 410885.4499185672 395486.12161052413 474679.7951305504 471618.371519714 416357.45603967604 427687.1571096998 1.1232424949526418 0.855541912274478 0.9946556186570152 1.1107164759881298 0.9607149597273901 0.9247089023743674 1.1098761962796027 1.1027181052311703 0.9735093727233017 1.0 18.70619636004167 -6.76861637893306 24.998691615082688 1.0550857424791327 0.99228954723764 0.07918375599777416 0.08390662692283513 396.5128754230785 1381105.3112717788 0.03451343706123569 0.023808765227838435 1.7036627235580475e-07 6.76861637893306 -0.06279619524149271 TS(ph)S(ph)KES(ph)SPIPSPTSDRK ddPTM_KYSE-520_SHP099_60min_R1 2 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.508)S(0.571)S(0.913)KES(0.519)S(0.453)PIPS(0.027)PT(0.004)S(0.004)DRK;T(0.476)S(0.536)S(0.986)KES(0.53)S(0.469)PIPS(0.002)PTSDRK 70.99 0.010209999999999999 1151980000.0 1001120.0 827370.0 732160.0 757580.0 770660.0 744180.0 736890.0 743310.0 824080.0 666490.0 True False 945585.8779167567 787621.9032923112 779356.20509742 829580.1754252671 831306.5575444155 739535.2965804449 811382.0325533566 740731.6310998583 674447.845366257 660585.4171213735 1.4314361979671408 1.1923089473039283 1.1797962608584562 1.2558257477743309 1.2584391601724905 1.1195150201818116 1.228277239435754 1.1213260418731876 1.0209850654973458 1.0 19.333385595923865 -1.0000000000000189 0.09160259650402736 0.8450211011420311 2.204742742812086 0.6677093618499725 0.06878464387233353 98.46183449119661 0.6484736043139205 1.23116492838133 16.818237788136905 0.09999999999999565 1.0000000000000189 1.3597216416700548 TS(ph)S(ph)KESSPIPS(ph)PTSDRK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.467)S(0.532)S(0.561)KES(0.396)S(0.043)PIPS(0.991)PT(0.005)S(0.004)DRK 87.06200000000001 0.0032645000000000005 2336600000.0 2569000.0 2438600.0 2128200.0 2329100.0 2399600.0 2383800.0 2340000.0 2541300.0 2911600.0 2294400.0 True False 2426492.4488254655 2321445.9955867752 2265387.1772403987 2550456.963730549 2588434.8681436395 2368921.8199742874 2576550.036199232 2532484.8234438784 2382926.8354630563 2274073.4010161883 1.0670246825547351 1.0208316031265385 0.9961803239192244 1.1215367817902695 1.1382371681525214 1.0417086004856815 1.1330109375747852 1.1136337210189509 1.0478671596080522 1.0 21.116847390648893 -5.262429923210349 24.983798383685805 1.0922738971641093 1.0272941432172 0.23872743557446774 0.04551518333193599 109.68005559327754 2766413.816388423 0.01223950150284053 0.0193972995846131 5.46474720711098e-06 5.262429923210349 -0.06497975394690925 TS(ph)SEDNLYLAVLR ddPTM_KYSE-520_SHP099_60min_R1 1 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 1 T(0.125)S(0.438)S(0.438)EDNLYLAVLR 67.102 0.027275999999999998 23828000.0 74830.0 71063.0 61272.0 59646.0 67092.0 77283.0 66134.0 71349.0 82886.0 66760.0 True False 70679.03073009326 67649.02681226243 65221.691158666275 65314.73790677621 72371.75869873869 76800.64813032682 72819.47012564106 71101.5069719818 67835.99178602513 66168.55833849411 1.068166399644454 1.022374198727359 0.985690073902109 0.9870962817815968 1.0937484587243276 1.1606819017794348 1.1005146848314773 1.0745512484683817 1.0251997850550263 1.0 16.013858226422226 -5.770618390081612 24.99976617610149 1.0849918134721723 1.014146079849645 0.27395710656261785 0.04634831791896023 231.80601603164695 631340.293689879 0.014943365926069742 0.01718274837940934 1.6958272512455388e-06 5.770618390081612 -0.07084573362252722 TS(ph)SEEEDS(ph)RREEPSLLLVLK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSEEEDSRREEPSLLLVLK 20 2 A0A087WZV0;O43314-2;O43314;D6RBU4 A0A087WZV0 PPIP5K2 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 2 T(0.458)S(0.538)S(0.015)EEEDS(0.649)RREEPS(0.34)LLLVLK 106.45 0.00027423 148620000.0 468360.0 498360.0 490270.0 403830.0 434970.0 399910.0 336450.0 395340.0 608470.0 377010.0 True False 442379.13714748726 474418.0375463891 521873.58865973545 442209.88178408355 469199.66435924283 397414.01335091726 370461.64943556953 393968.65781304974 497987.18628046615 373669.9847093415 1.1838765628756376 1.2696177294395596 1.3966162924904817 1.1834236087441052 1.2556525371557712 1.0635427773521735 0.991413987194429 1.0543224608192643 1.3326925004903045 1.0 18.51140515736846 -6.255154694744085 22.61446622063385 1.0857282187909574 1.2620676952973708 0.3961603806559062 0.10450579148403058 143.71504292362485 517136.01722394594 0.03550555396984146 0.03456981320770514 5.55706280651965e-07 6.255154694744085 0.17633947650641346 TS(ph)SIADEGTYTLDSILR ddPTM_KYSE-520_SHP099_60min_R1 3 TSSIADEGTYTLDSILR 17 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;E7ERV5 A0A087WY00 MYO5A Unconventional myosin-Va 1 TS(0.5)S(0.5)IADEGTYTLDSILR;T(0.008)S(0.636)S(0.357)IADEGTYTLDSILR;T(0.008)S(0.636)S(0.356)IADEGTYTLDSILR 251.28 7.9282e-28 289557000.0 256987.0 280158.0 249454.0 206492.0 210919.0 300696.0 265371.0 319784.0 360140.0 329824.0 True False 242731.4188191165 266698.7891542688 265534.2039805122 226116.93759591653 227517.12533505095 298819.2447264819 292197.29045137914 318674.74394214695 294747.654390598 326902.0159591892 0.7425204096918733 0.815837089201566 0.8122745991681549 0.6916963694226504 0.695979572556244 0.9140942243800259 0.8938375298604991 0.9748326054432489 0.9016391456802597 1.0 18.31849874846875 -6.347898770971764 5.7654571791995455 0.9348936551313347 0.7555942489044835 0.7850725338421667 0.048484927704041655 0.11820488716273948 6.23115244742102 0.01838285280560649 0.016176017004254414 4.48849999492309e-07 6.347898770971764 -0.17929940622685125 TS(ph)SKES(ph)SPIPS(ph)PTSDRK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.335)S(0.367)S(0.367)KES(0.465)S(0.465)PIPS(0.723)PT(0.132)S(0.145)DRK 64.488 0.014381 3653600000.0 990460.0 1002600.0 889330.0 793600.0 942030.0 994220.0 928700.0 1062400.0 1257800.0 1005100.0 True False 935517.2093669398 954433.591066719 946657.634778311 869023.5053954598 1016162.4015824954 988014.7041928174 1022582.0592385588 1058714.782366025 1029415.2265577117 996195.5959559678 0.9390898867297242 0.9580785088201749 0.9502728566771877 0.8723422477706587 1.0200430575155948 0.9917878659609012 1.0264872314128934 1.0627579429821337 1.0333464941389003 1.0 19.9260695075046 -5.848254866422333 9.508339578845614 1.0245440758525741 0.9335027759184071 0.7217073950679591 0.02807972415629446 0.17797084111757663 17.866253818003248 0.009167259588107714 0.010405692196892859 1.4182249897870922e-06 5.848254866422333 -0.09104129993416699 TS(ph)SKESS(ph)PIPS(ph)PTSDR ddPTM_KYSE-520_SHP099_60min_R1 1 TSSKESSPIPSPTSDR 16 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.29)S(0.418)S(0.29)KES(0.241)S(0.76)PIPS(0.998)PT(0.002)SDR 157.88 2.2592e-06 534470000.0 938300.0 837580.0 749350.0 803700.0 874230.0 816250.0 757220.0 864280.0 1020700.0 770700.0 True False 886250.628545322 797341.3995667885 797654.3000023912 880083.4063587841 943026.9273117256 811155.4809774362 833767.1873550358 861282.0144044678 835366.6097531051 763872.1975955262 1.1602079920371648 1.0438151854153281 1.0442248094814846 1.1521343611261947 1.2345349526794305 1.061899468956647 1.0915008950181995 1.1275210920302672 1.093594730090485 1.0 19.54297175756896 -10.259512252641112 5.102350915887361 0.9999814546095486 1.111292094859231 0.26299390723292815 0.05631048920396502 1.246240982868203e-05 1.8086305988383476e-06 0.057197856665251984 0.013870207279456011 5.5015839881106885e-11 10.259512252641112 0.11131064024968251 TS(ph)SKESS(ph)PIPS(ph)PTSDRK ddPTM_KYSE-520_SHP099_60min_R1 2 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.303)S(0.356)S(0.356)KES(0.434)S(0.551)PIPS(0.951)PT(0.026)S(0.023)DRK;T(0.301)S(0.346)S(0.357)KES(0.428)S(0.568)PIPS(0.967)PT(0.015)S(0.018)DRK 105.16 0.00030448 5393400000.0 2804000.0 2570800.0 2322030.0 2376330.0 2393300.0 2336940.0 2273120.0 2562900.0 3170900.0 2360020.0 True False 2648456.53036458 2447294.90915053 2471711.769179359 2602175.6887303344 2581639.0939857364 2322354.290616122 2502909.153113334 2554009.898085357 2595144.491884119 2339112.058867774 1.1322486754424845 1.0462495372432568 1.0566880538317471 1.1124630300909542 1.1036833760052331 0.9928358420503534 1.0700253301780012 1.0918715451886485 1.1094571044793275 1.0 21.157529547260907 TS(ph)SKESSPIPSPTSDRK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 1 T(0.011)S(0.543)S(0.44)KES(0.005)S(0.001)PIPSPTSDRK 123.43 6.267600000000001e-05 586150000.0 348370.0 297790.0 234410.0 236080.0 290580.0 278370.0 228980.0 281890.0 293400.0 264550.0 True False 329045.2216416223 283483.7214080974 249520.443669261 258516.97221995995 313446.99282596237 276632.5895738914 252127.5330294443 280912.18938362034 240125.95601211023 262206.2928167855 1.2549097052813296 1.0811476656900043 0.9516188226787194 0.9859297023073224 1.195421320589666 1.0550188807527445 0.9615617166198843 1.0713403799957821 0.915790210191089 1.0 18.000342784354327 -4.316598060300931 3.375042223446957 1.0239081681932787 1.2722433888816622 0.4759485307086595 0.07475240596331577 0.24310088446458472 4.6452238480626145 0.019509973964090443 0.1421871478838709 4.823940469551259e-05 4.316598060300931 0.24833522068838354 TS(ph)SPHKEES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSPHKEESPK 11 1 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 T(0.212)S(0.69)S(0.097)PHKEES(1)PK 145.79 4.8303e-05 2713600000.0 4394100.0 3725600.0 3456800.0 5459300.0 3655500.0 4586500.0 4375000.0 4122100.0 4859600.0 4929200.0 True False 4150350.513578819 3546616.58376039 3679630.859075557 5978150.230601602 3943167.053050123 4557873.952224206 4817267.69588532 4107801.397205372 3977219.1405468713 4885531.122859572 0.8495187952358307 0.7259428902551959 0.7531690550201255 1.2236438741797442 0.8071112339454569 0.9329331525282386 0.9860274297189828 0.8408095852638876 0.814081220757621 1.0 22.220083980374202 TS(ph)SPHKEES(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 3 TSSPHKEESPKK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 T(0.405)S(0.464)S(0.132)PHKEES(1)PKK;T(0.143)S(0.689)S(0.168)PHKEES(1)PKK;T(0.106)S(0.812)S(0.081)PHKEES(1)PKK 166.67 2.1577e-06 7384100000.0 7836740.0 7271960.0 5626440.0 10055580.0 8347040.0 8122360.0 7592350.0 7826570.0 9032680.0 9614250.0 True False 7402020.410046121 6922604.126165512 5989129.325022303 11011259.299879635 9003904.559839012 8071665.338403533 8359858.83219541 7799421.455405167 7392573.007332874 9529075.224773318 0.7767826610081362 0.7264717680230287 0.6285110762324552 1.155543328197577 0.9448875517774288 0.8470565241650242 0.8773001193716863 0.818486712659014 0.7757912318830218 1.0 23.183904779957775 -5.217107956958506 24.99951608073034 0.9060389684635394 0.7121768144840732 0.43977815186053903 0.10625599945866701 476.43092143481545 268669.7002370292 0.0302485152316058 0.052391668008266196 6.065855257653208e-06 5.217107956958506 -0.19386215397946616 TS(ph)SPHKEES(ph)PKKTK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSPHKEESPKKTK 14 3 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 T(0.445)S(0.518)S(0.037)PHKEES(0.991)PKKT(0.008)K 71.07300000000001 0.046967 529520000.0 331330.0 465330.0 422740.0 315270.0 406510.0 409420.0 234830.0 189370.0 548840.0 386970.0 True False 312950.46441002004 442974.84832542983 449990.49680791545 345233.1660106183 438500.0242744926 406864.6579133626 258568.9081199428 188713.11966929014 449184.4911304924 383541.74685810413 0.8159488946735173 1.1549586243327865 1.1732503710329996 0.9001188758165131 1.1432915135486437 1.0608093154039033 0.6741610534917949 0.49202758556321335 1.171148890075514 1.0 18.5490240918189 -6.745775928873649 24.596201953753294 0.7920033605985037 1.0507615345638666 0.19100433604755473 0.2008083042695908 257.80410496136517 404827.94042113604 0.07493315920730774 0.05782566068529491 1.7956598457060227e-07 6.745775928873649 0.2587581739653628 TS(ph)STLDSEGTFNSYR ddPTM_KYSE-520_SHP099_60min_R1 1 TSSTLDSEGTFNSYR 15 0 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 T(0.116)S(0.878)S(0.005)T(0.001)LDSEGTFNSYR 79.771 0.014098 0.0 289780.0 243750.0 213740.0 239480.0 240940.0 213340.0 225520.0 209740.0 242690.0 226290.0 True False 273705.3257378913 232039.884123791 227518.0223960917 262240.1071977127 259900.60723892724 212008.46592554505 248317.7624630988 209012.4608936839 198623.61371703836 224285.24665095602 1.2203447610793825 1.0345748888463588 1.0144136798715373 1.1692258457187956 1.1587949324343996 0.945262646969746 1.107151567795912 0.9319046348998585 0.885584837535687 1.0 17.774975198367326 -6.93692784388939 1.1813563649517966 0.9328619376999614 1.1048979256602778 0.4146573670867393 0.08175256130219812 0.506044618908017 1.3525347222198494 0.06121928610587737 0.029899393000900967 1.156304341094259e-07 6.93692784388939 0.17203598796031638 TS(ph)TPS(ph)PQPSKR ddPTM_KYSE-520_SHP099_60min_R1 1 TSTPSPQPSKR 11 1 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 2 T(0.29)S(0.355)T(0.355)PS(0.998)PQPS(0.001)KR 53.376999999999995 0.046014 379410000.0 549780.0 522890.0 517720.0 487950.0 505690.0 507770.0 466000.0 460840.0 560880.0 508060.0 True False 519282.60744074103 497769.5795261087 551093.0595812886 534324.6212924831 545484.9260174854 504600.8190822816 513107.827721728 459241.45360086457 459038.3306341938 503558.9836646993 1.0312249890998102 0.9885030268024261 1.0943962424633067 1.0610963931253572 1.0832592480977423 1.00206894415824 1.0189627121485076 0.9119913823375573 0.9115880076123314 1.0 18.941801250596566 -7.016408935911953 2.16437777061387 0.934421477241989 1.0474197960999412 0.5705156296316028 0.039072301263484474 0.22291695241136938 2.0614569730817958 0.022804659188991695 0.011986057675710158 9.629218999778448e-08 7.016408935911953 0.1129983188579522 TS(ph)VAGTVR ddPTM_KYSE-520_SHP099_60min_R1 1 TSVAGTVR 8 0 Q96EB6;B0QZ35;E9PC49 Q96EB6 SIRT1 NAD-dependent protein deacetylase sirtuin-1;SirtT1 75 kDa fragment 1 T(0.285)S(0.715)VAGTVR 74.42399999999999 0.032206 0.0 448770.0 412110.0 452090.0 447910.0 470870.0 478690.0 458010.0 500980.0 567740.0 490320.0 True False 423875.8334991844 392311.6170102788 481232.44476957596 490479.2317309482 507924.79011618445 475702.31814896 504310.12054684164 499242.21730961115 464652.7275607208 485976.14626318763 0.8722153067768641 0.8072651714016774 0.990238818242238 1.009266062753051 1.0451640353580445 0.9788593983609565 1.0377260785835463 1.0272977823056342 0.9561224992904923 1.0 18.89052597651401 -4.813843857510617 6.252354007266938 1.0092006644334905 0.8399346245095956 0.8365214142512496 0.02933184389621549 0.05930362835694982 5.014126361130979 0.007394275105297053 0.01602789855821887 1.5351688249394826e-05 4.813843857510617 -0.169266039923895 TS(ph)VQTEDDQLIAGQSAR ddPTM_KYSE-520_SHP099_60min_R1 5 TSVQTEDDQLIAGQSAR 17 0 P35221;G3XAM7;P35221-2;P35221-3;P26232;P26232-5;P26232-2;P26232-3;P26232-4;P26232-6;A0A0A0MRI5;A0A0A0MTJ6 P35221 CTNNA1;CTNNA2 Catenin alpha-1;Catenin alpha-2 1 T(0.197)S(0.803)VQTEDDQLIAGQSAR;T(0.069)S(0.931)VQTEDDQLIAGQSAR;T(0.006)S(0.994)VQTEDDQLIAGQSAR;T(0.035)S(0.965)VQTEDDQLIAGQSAR;T(0.232)S(0.768)VQTEDDQLIAGQSAR 395.16 1.4879999999999999e-86 2817660000.0 2792120.0 2694750.0 2470530.0 2306500.0 2466770.0 2619750.0 2635730.0 2940490.0 3678810.0 2883760.0 True False 2637235.537646772 2565290.165097787 2629784.316787761 2525709.066525487 2660890.7649986213 2603399.1685030805 2902175.310645902 2930290.1265055225 3010830.8392532724 2858212.1299313293 0.9226871266934737 0.89751566660639 0.9200801750326851 0.8836674647329865 0.9309633589241507 0.9108488279229398 1.0153813568468864 1.025217861130526 1.0533965648398567 1.0 21.446681563239682 -6.784997103636701 4.6534500699329 1.027619575746813 0.9098812814454151 0.9097503521801588 0.017376709475554766 0.05063718240852306 2.637325538334683 0.007031264970082281 0.0048688025520854375 1.640600714530943e-07 6.784997103636701 -0.11773829430139782 TS(ph)WPPATAR ddPTM_KYSE-520_SHP099_60min_R1 4 TSWPPATAR 9 0 A0A2R8YFR7;A0A2R8YF49;H0Y895;Q12774 A0A2R8YFR7;Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 T(0.449)S(0.546)WPPAT(0.005)AR;T(0.07)S(0.93)WPPATAR;T(0.392)S(0.608)WPPATAR;T(0.06)S(0.94)WPPATAR 146.79 0.00032379 3858180000.0 2710230.0 2728870.0 2513200.0 2206810.0 2552190.0 2591610.0 2296990.0 2631200.0 2999660.0 2898700.0 True False 2559888.139190439 2597770.9890826233 2675204.893262175 2416544.558898378 2753032.833025303 2575434.8006810825 2529192.165662086 2622072.9813266955 2454997.3592750044 2873019.7731544734 0.891009579227425 0.9041953046603516 0.9311474004666856 0.8411165775740896 0.958236646593828 0.8964208407982333 0.8803253598512909 0.9126539976603617 0.854500683293072 1.0 21.45413649137447 -10.071347991303798 4.499464049847674 1.0000062069569542 0.8980269205258119 0.47827261279527966 0.032361498638666504 2.0651837340401326e-06 4.262448481335211e-07 0.02948064809248112 0.007149633378641177 8.485003165895477e-11 10.071347991303798 -0.10197928643114229 TSAAACAVTDLS(ph)DDS(ph)DFDEKAK ddPTM_KYSE-520_SHP099_60min_R1 9 TSAAACAVTDLSDDSDFDEKAK 22 1 Q9NQZ2 Q9NQZ2 UTP3 Something about silencing protein 10 2 TSAAACAVT(0.008)DLS(0.992)DDS(1)DFDEKAK;TSAAACAVT(0.066)DLS(0.934)DDS(1)DFDEKAK;TSAAACAVTDLS(1)DDS(1)DFDEKAK;TSAAACAVT(0.001)DLS(0.999)DDS(1)DFDEKAK;TSAAACAVTDLS(1)DDS(1)DFDEKAK;TSAAACAVTDLS(1)DDS(1)DFDEKAK;TSAAACAVTDLS(1)DDS(1)DFDEKAK;TSAAACAVTDLS(1)DDS(1)DFDEKAK;TSAAACAVTDLS(1)DDS(1)DFDEKAK 239.47 4.3397e-27 10536750000.0 15492570.0 15276060.0 15417540.0 11724260.0 12712750.0 12337950.0 11090370.0 11465220.0 19296780.0 12768860.0 True False 14633166.258427387 14542175.14776647 16411379.297336193 12838530.145372685 13713171.099347008 12260944.277519817 12211492.831180722 11425449.827822454 15792971.184237797 12655737.834422745 1.1562475811268917 1.1490578690886553 1.296754050380086 1.0144434337485055 1.0835536638605232 0.9688051726364687 0.9648977397403329 0.902788124825564 1.2478901973839875 1.0 23.5932882837923 -5.283354081260746 24.30803822257699 1.0194657998711831 1.1955236316481506 0.4148369404607013 0.09476087462514492 512.1267962249669 568055.600476982 0.026293445288568848 0.03904005817046602 5.2076995307005995e-06 5.283354081260746 0.17605783177696743 TSADAQEPASPVVSPQQS(ph)PPT(ph)SPHTWR ddPTM_KYSE-520_SHP099_60min_R1 1 TSADAQEPASPVVSPQQSPPTSPHTWR 27 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;F2Z3L2;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 2 TSADAQEPASPVVS(0.001)PQQS(0.988)PPT(0.632)S(0.366)PHT(0.013)WR 131.3 7.5871e-05 463290000.0 345970.0 361500.0 283850.0 312010.0 295690.0 380050.0 233640.0 312380.0 347930.0 383700.0 True False 326778.3544259039 344132.9973774378 302147.42517605796 341663.3365907728 318959.12075403944 377677.96697761095 257258.61130666177 311296.4266900404 284754.68260154553 380300.71651408257 0.8592630522004374 0.9048970523427728 0.7944960712817101 0.8984030840712891 0.8387023923533111 0.9931034851563986 0.6764610218585677 0.8185533531029071 0.7487618882542942 1.0 18.53678113154978 -6.759874565903741 24.99999996541464 0.7958235343107931 0.8774133463306134 0.11764277381225452 0.09052640528389765 76.3954306646903 1220553.836407493 0.03355836989564457 0.02458586270693719 1.7383028175317715e-07 6.759874565903741 0.0815898120198203 TSADAQEPASPVVSPQQS(ph)PPTS(ph)PHTWR ddPTM_KYSE-520_SHP099_60min_R1 1 TSADAQEPASPVVSPQQSPPTSPHTWR 27 0 E9PMG1;H0YDT0;Q96D71-4;Q96D71-2;F2Z3L2;Q96D71;Q96D71-3 E9PMG1;Q96D71 REPS1 RalBP1-associated Eps domain-containing protein 1 2 TSADAQEPASPVVSPQQS(0.959)PPT(0.184)S(0.821)PHT(0.035)WR 106.61 0.00086471 761170000.0 600500.0 641470.0 528120.0 512480.0 582700.0 597650.0 543920.0 582800.0 675930.0 550480.0 True False 567189.0679329283 610652.8183338994 562163.4602218767 561185.9451172693 628555.1748905239 593919.8446629891 598904.741747644 580778.402826542 553198.1508086763 545603.175466959 1.0395633556338724 1.1192251911130595 1.0303522514155905 1.0285606285868363 1.1520372372330305 1.0885564295967998 1.0976929179986286 1.0644703494063759 1.0139203283324314 1.0 19.05749251545781 -7.7509114624465125 3.0678826984337793 1.000913457117691 1.080366240714494 0.37229441920792605 0.03726651429231677 0.26772036119241754 4.771159022804325 0.03465878145780486 0.009928570082755274 1.7745512133447942e-08 7.7509114624465125 0.07945278359680308 TSALS(ph)PNAK ddPTM_KYSE-520_SHP099_60min_R1 2 TSALSPNAK 9 0 P50616 P50616 TOB1 Protein Tob1 1 TSALS(1)PNAK;TSALS(1)PNAK 122.34 0.00072238 776230000.0 832410.0 908680.0 684690.0 604770.0 693100.0 960770.0 866840.0 1037600.0 1226580.0 1125470.0 True False 786234.5579318036 865025.6488435128 728826.2129427334 662247.1589692701 747643.0268004487 954773.478050464 954468.6467431373 1034000.8077776597 1003863.9915655551 1115499.2114024102 0.704827533623575 0.775460565100713 0.6533632704468254 0.5936778369719242 0.6702317842614239 0.8559158700346536 0.855642601076495 0.926939971994879 0.899923533162783 1.0 20.08925806299925 -6.414799697705827 2.5079536826043207 0.9147294089854007 0.6776655697046824 0.8167811341926506 0.05456172421825139 0.13684180192409867 1.6857074911957446 0.02385052482251436 0.02000578935505133 3.8476920171539813e-07 6.414799697705827 -0.23706383928071828 TSAQTT(ph)PSKIPR ddPTM_KYSE-520_SHP099_60min_R1 2 TSAQTTPSKIPR 12 1 O95684 O95684 FGFR1OP FGFR1 oncogene partner 1 T(0.016)S(0.016)AQT(0.275)T(0.693)PSKIPR;T(0.033)S(0.033)AQT(0.16)T(0.769)PS(0.005)KIPR 88.76799999999999 0.008027600000000001 2022310000.0 1601550.0 1635670.0 1413780.0 1123020.0 1161400.0 1593950.0 1070570.0 1186080.0 1773090.0 1621800.0 True False 1512708.8288892272 1557089.9580092772 1504914.5209279796 1229751.4831517246 1252795.5725379325 1584001.5668042677 1178793.6633563307 1181965.7653131525 1451141.5519615277 1607432.1137413068 0.9410716732343921 0.9686816287284084 0.9362227543316172 0.7650410071063415 0.7793769713994603 0.9854236165019098 0.7333396249081289 0.7353130220610815 0.9027700389685435 1.0 20.61632637920284 -5.130353804914411 6.3561795396314595 0.8309657583985525 0.9540637982320418 0.21244444368166893 0.09149431872378473 0.3218785870516125 15.188701620510733 0.02451837613134227 0.04304342337051084 7.407065670396961e-06 5.130353804914411 0.12309803983348933 TSASEGNPYVSSTLSVPAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 12 TSASEGNPYVSSTLSVPASPR 21 0 E9PFQ4;Q86SQ0-2;Q86SQ0-3;Q86SQ0;G5E9V3;E9PDY7;A0A1W2PQ63 E9PFQ4 PHLDB2 Pleckstrin homology-like domain family B member 2 1 TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLS(0.002)VPAS(0.998)PR;TSASEGNPYVSSTLS(0.05)VPAS(0.95)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLSVPAS(1)PR;TSASEGNPYVSSTLS(0.002)VPAS(0.998)PR 472.56 4.0012999999999997e-143 29834820000.0 6883200.0 8030330.0 5558100.0 5328080.0 4743390.0 6847050.0 5537370.0 6985550.0 8433870.0 7185580.0 True False 6501375.174680989 7644540.893028924 5916384.019274434 5834459.121254342 5116667.806802742 6804315.021165758 6097141.399123311 6961318.757489624 6902491.808561205 7121921.3514966555 0.9128681508557716 1.0733818187170014 0.830728637298293 0.8192254355670809 0.7184392461351018 0.9554044035793582 0.8561090607722045 0.9774495412009456 0.9691895582518139 1.0 22.763835073203715 -7.27223263391115 22.441961675189148 0.9799897267065447 0.880601918439338 0.21760904625899957 0.0880199809593149 331.5437632529192 689351.3171453399 0.05119688417619919 0.025084800882099738 5.342780916636605e-08 7.27223263391115 -0.09938780826720672 TSAVSS(ph)PLLDQQR ddPTM_KYSE-520_SHP099_60min_R1 8 TSAVSSPLLDQQR 13 0 Q5T200-2;Q5T200;A0A087WX14 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 TSAVS(0.13)S(0.87)PLLDQQR;TSAVS(0.076)S(0.924)PLLDQQR;TSAVS(0.001)S(0.999)PLLDQQR;TSAVS(0.001)S(0.999)PLLDQQR;TSAVS(0.001)S(0.999)PLLDQQR;TSAVS(0.001)S(0.999)PLLDQQR;TSAVS(0.17)S(0.83)PLLDQQR;TSAVS(0.264)S(0.736)PLLDQQR 353.49 2.9422999999999997e-52 9895330000.0 10828200.0 11490830.0 8942480.0 7423920.0 7846610.0 11303980.0 8448360.0 10558610.0 11731940.0 11519530.0 True False 10227538.16051845 10938793.278712539 9518926.569273902 8129487.124717061 8464093.565896217 11233427.667821521 9302402.676847922 10521984.646308104 9601715.434140144 11417475.926258735 0.8957792621218863 0.9580745647603874 0.8337154928771593 0.7120213939773046 0.7413279100006581 0.983880127304326 0.8147512407233183 0.9215683671474957 0.8409665582966044 1.0 23.444740412009367 -6.263994634803691 24.9980572147881 0.9012386507665658 0.8292537424868103 0.1944760362143083 0.08403823613610104 513.0357536149338 5019011.550139131 0.031197492468502994 0.02876092151129427 5.445093795723019e-07 6.263994634803691 -0.07198490827975557 TSCSGSGERES(ph)PERK ddPTM_KYSE-520_SHP099_60min_R1 2 TSCSGSGERESPERK 15 2 Q9H8Y5;C9JQZ3;C9K022 Q9H8Y5 ANKZF1 Ankyrin repeat and zinc finger domain-containing protein 1 1 TSCS(0.003)GS(0.017)GERES(0.98)PERK;TSCSGSGERES(1)PERK 139.02 7.786e-06 2238660000.0 1170780.0 1094850.0 1034470.0 1007480.0 1134700.0 951820.0 897700.0 1066840.0 1426610.0 1007610.0 True False 1105834.499507933 1042251.7625966462 1101153.5914105207 1103230.596290093 1223994.4344401523 945879.3383202992 988448.2767077154 1063139.3810423291 1167573.5859115084 998683.3593087184 1.107292405746486 1.0436258428478127 1.1026053264497484 1.1046850696037847 1.22560811996246 0.947126363430177 0.9897514237064212 1.0645409990392019 1.1691128875119083 1.0 19.92966780674278 -6.2739115634837335 24.998849409778714 1.035367974945903 1.111242590960967 0.26207542696209074 0.06902306069210372 1309.1203308671672 2623949.6173424325 0.025575806417700384 0.02270235761676126 5.322166248902681e-07 6.2739115634837335 0.07587461601506384 TSDDEVGS(ph)PKEESR ddPTM_KYSE-520_SHP099_60min_R1 2 TSDDEVGSPKEESR 14 1 Q6ULP2-7;Q6ULP2-8;Q6ULP2-6;Q6ULP2;Q6ULP2-9;B8ZZI9 Q6ULP2-7 AFTPH Aftiphilin 1 T(0.003)S(0.003)DDEVGS(0.994)PKEESR;T(0.001)S(0.001)DDEVGS(0.999)PKEESR 82.85 0.006642100000000001 1000220000.0 3057000.0 2861500.0 2660800.0 2616500.0 2916800.0 3092900.0 2997700.0 3027200.0 3857600.0 3048600.0 True False 2887422.1160215833 2724029.244800931 2832319.425430527 2865171.373320588 3146335.565678183 3073596.063847 3300736.7707326678 3016699.349753791 3157157.082182403 3021591.775774912 0.9555963645291166 0.9015212665855007 0.9373600524525374 0.9482324502904735 1.041284130736449 1.0172108914543068 1.092383424258615 0.9983808448049319 1.0448655266718563 1.0 21.526877331465858 -5.696550210667115 4.196519922622307 1.0348249316621687 0.9306191588499645 0.7397793630193283 0.028137649534566947 0.1023031008200519 3.56069565462361 0.008273470256065207 0.010609386397796971 2.0111746641404668e-06 5.696550210667115 -0.10420577281220422 TSDIFGS(ph)PVTATSR ddPTM_KYSE-520_SHP099_60min_R1 10 TSDIFGSPVTATSR 14 0 A6NGP5;Q9H910;Q9H910-3;H3BU16;H3BMV3;Q9H910-2;H3BMT0;H3BTV5 A6NGP5 HN1L Hematological and neurological expressed 1-like protein 1 TSDIFGS(1)PVTATSR;TSDIFGS(1)PVTATSR;TSDIFGS(1)PVTATSR;TSDIFGS(0.99)PVT(0.01)ATSR;TSDIFGS(0.986)PVT(0.014)ATSR;TSDIFGS(1)PVTATSR;TSDIFGS(1)PVTATSR;TSDIFGS(1)PVTATSR;TSDIFGS(0.999)PVT(0.001)ATSR;TSDIFGS(1)PVTATSR 342.47 4.1584999999999995e-54 47647100000.0 30876400.0 30445480.0 25829130.0 21654770.0 24531000.0 25834620.0 22730890.0 25665460.0 30652600.0 26806510.0 True False 29163624.541422606 28982833.44120284 27494117.04786918 23712832.83005602 26461450.13770284 25673376.553714316 25028750.19330805 25576432.509623386 25086860.529164333 26569025.17654921 1.0976550455890826 1.0908504639750256 1.0348184348192229 0.8924991666982885 0.9959511108092396 0.9662897446600552 0.9420274182810191 0.9626409828614291 0.9442145642327483 1.0 24.663241960208644 -5.009759622758693 4.283161957493064 0.9572612845078101 1.0905095959158584 0.7886588206126404 0.028726599496259574 0.08077461690397925 3.608281977159555 0.007487588541229505 0.015076165471210412 9.777782607753286e-06 5.009759622758693 0.13324831140804827 TSDS(ph)PWFLSGSETLGR ddPTM_KYSE-520_SHP099_60min_R1 3 TSDSPWFLSGSETLGR 16 0 E7EMW7;O95071-2;O95071 E7EMW7 UBR5 E3 ubiquitin-protein ligase UBR5 1 TS(0.003)DS(0.996)PWFLSGSETLGR;TS(0.003)DS(0.997)PWFLSGSETLGR;TSDS(1)PWFLSGSETLGR 184.8 2.9583000000000004e-09 114530000.0 211433.0 197721.0 170740.0 159622.0 165681.0 187269.0 169268.0 192416.0 216352.0 204986.0 True False 199704.39000876393 188222.1863747285 181746.17359365913 174792.42688789588 178719.15210406174 186100.18470709163 186379.2613364838 191748.5538062321 177067.93059008868 203169.98351669466 0.9829423941079074 0.926427138087857 0.8945522879304899 0.860326037647845 0.8796533277730774 0.9159826736502128 0.9173562851678276 0.9437838724364318 0.8715260370907046 1.0 17.63232774746037 -6.895302999164025 2.4351468508598955 0.9310074415261926 0.9060723057396703 0.07136174753924696 0.042195107452988906 0.9836068146237515 11.79321857270974 0.022023180078602652 0.013231147206594646 1.272614891529983e-07 6.895302999164025 -0.02493513578652229 TSDS(ph)TPDPQRVPLR ddPTM_KYSE-520_SHP099_60min_R1 1 TSDSTPDPQRVPLR 14 1 P52948-2;P52948-5;P52948;P52948-6;H7C3P6 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 T(0.012)S(0.012)DS(0.701)T(0.274)PDPQRVPLR 116.51 0.0011515999999999998 0.0 157200.0 180030.0 162120.0 121040.0 142120.0 140310.0 121160.0 138240.0 141110.0 156240.0 True False 148479.8026295692 171381.08856946093 172570.51460117163 132543.60520799717 153304.03544781415 139434.2732446483 133408.03520764929 137760.47770545864 115487.98109362261 154855.8351528805 0.9588260105470575 1.106713792220138 1.1143946524895392 0.8559161175757071 0.9899790685734616 0.9004134271530204 0.8614982772586064 0.889604693097005 0.7457773934034052 1.0 17.240566220946416 -5.264478960541096 24.995689478068602 0.8904609302739233 1.0646517190873066 0.49518004730282106 0.07772427202350296 212.36236589508854 1746344.8566257039 0.021527151106749437 0.033525044317076896 5.439024805163955e-06 5.264478960541096 0.17419078881338335 TSELLSGMGVSALEKEEPDSENIPQELLSNLGHPES(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 TSELLSGMGVSALEKEEPDSENIPQELLSNLGHPESPPR 39 1 A0A0A0MTL5;Q13309-2;Q13309;D6RF40;D6RAG5;D6R9R7 A0A0A0MTL5 SKP2 S-phase kinase-associated protein 2 1 TSELLSGMGVSALEKEEPDSENIPQELLSNLGHPES(1)PPR;TSELLSGMGVSALEKEEPDSENIPQELLS(0.001)NLGHPES(0.999)PPR 144.88 4.0130000000000003e-07 172284000.0 27842.3 44664.0 34913.0 46705.0 31039.0 34509.0 19809.2 27948.0 51886.0 30673.0 True False 26297.83211675097 42518.274397969195 37163.547842775064 51143.82915762971 33481.59271224807 34293.6165305364 21811.70725516147 27851.05491111224 42464.810339619486 30401.261083232886 0.8650243831909635 1.3985694304444223 1.2224344161588665 1.6822930146748718 1.1013224951616916 1.1280326969544776 0.7174606078164044 0.9161151188715932 1.39681081726705 1.0 14.891843549296963 -5.984133202340648 24.971837498227544 1.0187881820874802 1.306848969673316 0.19876734785349004 0.24662404452285094 360.1941784506627 566885.7013473947 0.0769284034996595 0.08720466573505856 1.0372102445596329e-06 5.984133202340648 0.28806078758583586 TSES(ph)PSKPGEK ddPTM_KYSE-520_SHP099_60min_R1 12 TSESPSKPGEK 11 1 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;E9PSG1;F8W7E0;H0YA91;H0Y944;D6RGF7;D6RBR1;E7EN75 P20810-6 CAST Calpastatin 1 TS(0.001)ES(0.999)PSKPGEK;T(0.119)S(0.026)ES(0.842)PS(0.013)KPGEK;TSES(0.98)PS(0.02)KPGEK;TSES(0.999)PS(0.001)KPGEK;TSES(0.899)PS(0.101)KPGEK;TSES(1)PSKPGEK;TSES(0.997)PS(0.003)KPGEK;TSES(0.999)PS(0.001)KPGEK;TSES(1)PSKPGEK;TSES(1)PSKPGEK;TSES(0.999)PSKPGEK;TSES(0.999)PSKPGEK 246.63 1.2633e-14 74306170000.0 31675610.0 25479670.0 24007810.0 21750320.0 21611070.0 22700750.0 21730950.0 21151410.0 25271740.0 21461130.0 True False 29918500.769536924 24255588.4074356 25555391.846454185 23817463.87332785 23311738.25883192 22559066.19883435 23927726.49963408 21078040.6954862 20683029.064722173 21271001.08470651 1.4065393843192373 1.1403124992022569 1.2014193288170192 1.119715230067484 1.0959398744797517 1.0605549832374337 1.124898936554411 0.9909284763584048 0.9723580466362215 1.0 24.342384597178913 -1.000000000000006 0.322228315648212 1.002298548327402 4.488356942586307 0.8224668786332708 0.05080297983613681 23.530716601293175 0.3359965664019662 0.04752529465436233 48.45426075599793 0.09999999999999862 1.000000000000006 3.4860583942589054 TSES(ph)PSKPGEKK ddPTM_KYSE-520_SHP099_60min_R1 2 TSESPSKPGEKK 12 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;E9PSG1;F8W7E0;H0YA91;H0Y944;D6RGF7;D6RBR1;E7EN75 P20810-6 CAST Calpastatin 1 TSES(0.979)PS(0.021)KPGEKK;T(0.001)S(0.008)ES(0.971)PS(0.02)KPGEKK 162.46 2.6045e-06 1421030000.0 1548200.0 1496680.0 1487070.0 941640.0 1207550.0 1099460.0 763580.0 748830.0 1534190.0 994910.0 True False 1462318.2597398162 1424777.2462375192 1582928.9115961273 1031133.1824856106 1302577.3149803537 1092597.8623160198 840770.1182226541 746232.4835082366 1255619.7697826163 986095.8714282666 1.4829372093626012 1.4448668608396709 1.6052484930328372 1.0456723452174195 1.3209438886441067 1.1080036880526587 0.8526251276205812 0.7567544953082396 1.2733242336406598 1.0 19.911368391334396 -5.708011477920103 0.9328795225002171 0.9617352156138013 1.5212076985515393 0.5892120117131199 0.1710757625665437 0.40524441500778396 0.7531856471406431 0.08193917926123907 0.13997592801341066 1.9587929041041426e-06 5.708011477920103 0.559472482937738 TSEVNCYR ddPTM_KYSE-520_SHP099_60min_R1 5 TSEVNCYR 8 0 P62633-2;P62633-8;P62633-5;P62633;P62633-4;P62633-6;P62633-7;P62633-3 P62633-2 CNBP Cellular nucleic acid-binding protein 0 ;;;; 201.49 1.5782e-05 17668320000.0 6483020.0 7662170.0 4899720.0 18649700.0 7644680.0 5696630.0 5994240.0 7124040.0 11451650.0 4298970.0 False True 6123393.957020036 7294067.852048358 5215563.791029191 20422161.880763236 8246272.823720755 5661075.219112396 6600196.277344828 7099328.368003438 9372319.032604232 4260884.470348049 1.437118044301222 1.7118670789617876 1.2240566078063972 4.792939593383309 1.9353429742363235 1.3286150465961761 1.5490202382337048 1.6661630742181404 2.199618200828303 1.0 22.02272150412697 -8.71945740326866 0.4436530855149355 0.9245537695477174 2.1081692341758824 0.08181277575338308 0.9808835529041262 8.252612166062631 2.6032807255446597 2.6730781992892743 0.641771831743174 1.9078428409970125e-09 8.71945740326866 1.183615464628165 TSFDQDS(ph)DVDIFPSDFPTEPPSLPR ddPTM_KYSE-520_SHP099_60min_R1 1 TSFDQDSDVDIFPSDFPTEPPSLPR 25 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 T(0.014)S(0.014)FDQDS(0.971)DVDIFPSDFPTEPPSLPR 130.15 4.4166000000000004e-05 85853000.0 109630.0 114780.0 88998.0 100310.0 101430.0 103170.0 93050.0 116790.0 118150.0 106210.0 True False 103548.60535801318 109265.79651170746 94734.95348183475 109843.43224069876 109411.96394224447 102526.0777610316 102456.40208048672 116384.88274899081 96696.93831912342 105269.0620301296 0.9836565783057515 1.0379668480415827 0.8999315815573636 1.0434540796920933 1.0393553607509973 0.9739431109558769 0.9732812291151806 1.1055943741161074 0.9185693921301141 1.0 16.6837219733464 TSFGS(ph)LTDSSEEALEGMVR ddPTM_KYSE-520_SHP099_60min_R1 4 TSFGSLTDSSEEALEGMVR 19 0 G3V160;Q969H4-2;Q969H4 G3V160 CNKSR1 Connector enhancer of kinase suppressor of ras 1 1 TSFGS(0.5)LT(0.5)DSSEEALEGMVR;TSFGS(0.988)LT(0.012)DSSEEALEGMVR;TSFGS(0.994)LT(0.006)DSSEEALEGMVR;T(0.004)S(0.004)FGS(0.954)LT(0.038)DSSEEALEGMVR 349.47 3.0569e-65 357165000.0 276641.0 299521.0 245802.0 222374.0 249350.0 306493.0 243039.0 297001.0 376013.0 313861.0 True False 261295.17225983847 285131.5615698133 261646.7902171052 243508.35810081885 268972.4263925725 304580.06349919393 267607.75395206234 295970.7728515546 307738.51771636534 311080.43572016316 0.8399601590338849 0.9165846798102966 0.8410904710589814 0.7827826187046693 0.8646394806857302 0.9791038860868231 0.860252601011504 0.9514284373633813 0.9892570614540218 1.0 18.2469281390711 -7.1306278837431085 0.7241753014674043 1.002795257390933 0.8506070828097922 0.5693615652723223 0.04673837126254411 0.5486737543530359 0.5475541310105769 0.04525504678739584 0.023088873258042552 7.402392621329267e-08 7.1306278837431085 -0.15218817458114065 TSFSVGS(ph)DDELGPIR ddPTM_KYSE-520_SHP099_60min_R1 10 TSFSVGSDDELGPIR 15 0 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 T(0.001)S(0.001)FS(0.001)VGS(0.997)DDELGPIR;TSFSVGS(1)DDELGPIR;TSFS(0.001)VGS(0.999)DDELGPIR;TSFSVGS(1)DDELGPIR;TSFSVGS(1)DDELGPIR;TSFSVGS(1)DDELGPIR;TSFSVGS(1)DDELGPIR;TSFSVGS(1)DDELGPIR;TSFSVGS(1)DDELGPIR;TSFSVGS(1)DDELGPIR 440.83 1.7301999999999996e-113 12171150000.0 6825530.0 6019930.0 5537950.0 5470980.0 5477450.0 5526190.0 4973320.0 5556170.0 6790100.0 5423480.0 True False 6446904.24454328 5730723.526700849 5894935.11803329 5990940.294289878 5908494.15257267 5491698.998373896 5476071.720525795 5536896.943089825 5557189.004491584 5375432.186603585 1.1993276113890843 1.0660953999164393 1.0966439373422638 1.1145039294180354 1.0991663456005563 1.0216292956053032 1.0187221288314303 1.0300375394723862 1.0338125031771335 1.0 22.357949321868823 -6.212323684620196 3.8662889373915363 1.0220227151905956 1.1130011670346776 0.677155460804818 0.032648911926366236 0.14662800173543666 4.6024336495743885 0.011081992324186295 0.010772324179648483 6.133047317836343e-07 6.212323684620196 0.09097845184408193 TSFSVGS(ph)DDELGPIRK ddPTM_KYSE-520_SHP099_60min_R1 3 TSFSVGSDDELGPIRK 16 1 Q9NRY4 Q9NRY4 ARHGAP35 Rho GTPase-activating protein 35 1 TSFSVGS(1)DDELGPIRK;TSFS(0.006)VGS(0.994)DDELGPIRK;TSFSVGS(1)DDELGPIRK 232.84 4.0998999999999994e-23 1852400000.0 1233780.0 1146030.0 1041150.0 988920.0 1029050.0 995270.0 922250.0 961550.0 1201170.0 989230.0 True False 1165339.7639205446 1090972.9985739 1108264.1948988982 1082906.6594703596 1110030.3805064238 989058.1507533382 1015480.0302926255 958214.6074774578 983067.8070315839 980466.1918092944 1.1885568045646688 1.1127084316499305 1.1303441201310296 1.104481387034904 1.132145493418839 1.0087631363690255 1.03571141848218 0.9773050978017154 1.002653447149961 1.0 19.90310835906129 -6.267231005023311 6.670681665000732 1.0050652118955425 1.1308928600000536 0.8714815304105759 0.024712837637365988 0.05062517844417277 13.110077978085 0.008556092690901244 0.007943481253857961 5.404667674875691e-07 6.267231005023311 0.12582764810451108 TSGVPGNRPGS(ph)VIR ddPTM_KYSE-520_SHP099_60min_R1 4 TSGVPGNRPGSVIR 14 1 A0A087X2D8;O60271-4;O60271-2;O60271-9;O60271 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 TSGVPGNRPGS(1)VIR;TSGVPGNRPGS(1)VIR;TSGVPGNRPGS(1)VIR;TSGVPGNRPGS(1)VIR 128.06 7.722e-05 1118970000.0 1355050.0 1299860.0 1304320.0 1240310.0 1212600.0 1288780.0 1207390.0 1330610.0 1507700.0 1391960.0 True False 1279882.6752747959 1237412.7744703623 1388398.5541857872 1358188.6894872014 1308024.721249784 1280736.2459713325 1329444.7641908498 1325994.4244767101 1233939.6860240586 1379628.3173284938 0.9277010765864497 0.8969174950442327 1.0063569562520114 0.984459852286297 0.9480993575013287 0.9283197727133816 0.9636253094349214 0.9611243896793593 0.8944000862590686 1.0 20.395848215333377 TSISDPPES(ph)PPLLPPREPVR ddPTM_KYSE-520_SHP099_60min_R1 3 TSISDPPESPPLLPPREPVR 20 1 G5E9C8;Q07889 G5E9C8 SOS1 Son of sevenless homolog 1 1 TSISDPPES(1)PPLLPPREPVR;T(0.001)S(0.001)IS(0.001)DPPES(0.998)PPLLPPREPVR;TSISDPPES(1)PPLLPPREPVR 102.29 0.00044977 2831760000.0 4330950.0 4548270.0 3599110.0 3312840.0 3649540.0 3941870.0 3386390.0 3650780.0 4880560.0 4261620.0 True False 4090703.569965224 4329764.282107551 3831114.3893796112 3627691.3175583375 3936738.0349578857 3917267.32716757 3728719.349181501 3638116.2962784586 3994373.332905465 4223865.362290192 0.9684739495927569 1.025071566144793 0.9070162187419653 0.8588558124853185 0.9320226137187703 0.9274129242234218 0.8827741959937327 0.8613239258899723 0.9456677688087348 1.0 22.01013241816543 -4.772679090268433 24.96231255895044 0.9074146235927394 0.9967727540351778 0.37129348302853993 0.04210951007725005 166.4387518378335 369646.44220594474 0.010527205943058088 0.022233440679844223 1.6877997170100115e-05 4.772679090268433 0.08935813044243845 TSKEPPS(ph)SPLQPQK ddPTM_KYSE-520_SHP099_60min_R1 2 TSKEPPSSPLQPQK 14 1 H0Y4V9;Q92615;A0A087X183 H0Y4V9 LARP4B La-related protein 4B 1 TSKEPPS(0.61)S(0.39)PLQPQK;TSKEPPS(0.717)S(0.283)PLQPQK 110.38 0.00011248 4416000000.0 3341600.0 3498700.0 3035600.0 2566600.0 2855700.0 3095200.0 2645590.0 3135200.0 4732400.0 3320900.0 True False 3156234.786685548 3330617.2003442342 3231279.6331317327 2810528.892323573 3080427.3432896305 3075881.7086938536 2913032.0556702227 3124324.722961185 3873115.4540958097 3291479.409621108 0.958910688445981 1.0118906381758686 0.9817104198454321 0.8538801379429263 0.9358792688434979 0.9344982379968549 0.885022111077265 0.949215940354564 1.176709610509657 1.0 21.650304742097912 -7.668574814266017 8.295907585746397 1.0873724997938337 0.9372495038484301 0.5175898951078787 0.05777380322173649 0.18155076510092746 14.004537068560174 0.03949777681725912 0.014756955748130568 2.1449895747544907e-08 7.668574814266017 -0.15012299594540357 TSKEPPSS(ph)PLQPQK ddPTM_KYSE-520_SHP099_60min_R1 2 TSKEPPSSPLQPQK 14 1 H0Y4V9;Q92615;A0A087X183 H0Y4V9 LARP4B La-related protein 4B 1 TSKEPPS(0.119)S(0.88)PLQPQK;TSKEPPS(0.404)S(0.596)PLQPQK 93.39 0.0014372 3545500000.0 3120200.0 3210200.0 2702800.0 2122050.0 2236400.0 2669800.0 2543000.0 2901000.0 4205500.0 2910500.0 True False 2947116.2860355047 3055977.1733915624 2877026.8126328997 2323728.9939824007 2412391.956624624 2653136.787887976 2800071.2572883093 2890937.10809849 3441887.2120277053 2884715.234334739 1.0216316158205323 1.0593687505159652 0.9973347727323899 0.8055315014545238 0.8362669312768266 0.9197222506781788 0.9706577702925503 1.002156841579958 1.1931462665920503 1.0 21.45999747908227 -7.541521860690277 4.955076692879164 1.0996429603279145 0.9427533261716156 0.33129482704564994 0.08555926994332312 0.222972416874433 15.069253939727826 0.06474598517534627 0.02454139355935056 2.873942926896793e-08 7.541521860690277 -0.15688963415629897 TSLDIEEYS(ph)DTEVQK ddPTM_KYSE-520_SHP099_60min_R1 3 TSLDIEEYSDTEVQK 15 0 P51580 P51580 TPMT Thiopurine S-methyltransferase 1 TSLDIEEY(0.017)S(0.978)DT(0.005)EVQK;TSLDIEEYS(0.995)DT(0.005)EVQK;TSLDIEEYS(1)DTEVQK 224.06 2.1091999999999998e-14 346830000.0 1234900.0 1115330.0 1054230.0 808560.0 1035980.0 1002570.0 934440.0 1093210.0 1263170.0 1126770.0 True False 1166397.6352878811 1061747.8726555384 1122187.3526276401 885405.2992975723 1117505.7320801166 996312.5887455418 1028902.3144555601 1089417.9096671313 1033810.1699243947 1116787.6944137942 1.0444219981311016 0.9507159489367883 1.0048349907872867 0.79281434038573 1.0006429491208706 0.8921235376510034 0.9213052038468552 0.975492401211468 0.925699821994408 1.0 20.09092351939949 -4.0822909214099115 1.4141997115323435 0.9321701896980975 1.125768464420784 0.21083193486603613 0.060968281424876834 2.7948288833612733 3.692915118233599 0.016569710291001998 0.8620187707130389 8.273877347361623e-05 4.0822909214099115 0.19359827472268643 TSLEASMEAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 TSLEASMEASPK 12 0 A0A0A0MRP0;Q8IWC1-2;Q8IWC1-4;Q8IWC1;Q8IWC1-3 A0A0A0MRP0 MAP7D3 MAP7 domain-containing protein 3 1 TSLEASMEAS(1)PK;TSLEASMEAS(1)PK;TSLEASMEAS(1)PK 150.26 1.8488e-05 2799500000.0 1263650.0 1439360.0 1186500.0 1070800.0 1086410.0 1216440.0 1164640.0 1318350.0 1484720.0 1458100.0 True False 1193552.8154761782 1370210.9850765923 1262983.6884671235 1172568.5100522419 1171904.2861726673 1208847.7467444926 1282373.176991059 1313776.9515552043 1215132.2747454008 1445182.368384636 0.8258838756871087 0.9481232369366341 0.8739268594031032 0.8113636975538869 0.8109040850550734 0.8364672675156504 0.887343497294699 0.9090734707922633 0.8408158730192816 1.0 20.46282012804524 -10.029327526981415 4.917109255848367 1.0000023275146515 0.8620266971850978 0.49309642842845336 0.04242442144393977 1.155908365427552e-06 2.2817142101652546e-07 0.043863153878314416 0.01063819792131531 9.3470049571997e-11 10.029327526981415 -0.13797563032955362 TSLPLS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 3 TSLPLSPVK 9 0 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 T(0.02)S(0.015)LPLS(0.966)PVK;TS(0.001)LPLS(0.999)PVK;TSLPLS(1)PVK 124.46 0.00068348 2028550000.0 5509770.0 6263190.0 4130990.0 4107920.0 4193030.0 6599500.0 4667900.0 6335020.0 7346200.0 6567330.0 True False 5204132.074645805 5962296.951160146 4397280.2252176935 4498335.481708812 4522997.605922799 6558310.072539776 5139776.88631384 6313045.294224783 6012315.26263178 6509148.565505431 0.7995104155748683 0.9159872280004071 0.6755538271964834 0.6910789385799675 0.694867778850826 1.0075526785937674 0.7896235328767212 0.9698726693196285 0.923671537394834 1.0 22.634037412153212 -6.257527892194657 24.99526812794774 0.9269785915936382 0.7563119186777292 0.5267129109364466 0.08628816965190353 314.9858891364646 2012833.2630770442 0.030337833932515355 0.02926961179428642 5.526779115345914e-07 6.257527892194657 -0.17066667291590898 TSLPTVGPSGLYSPS(ph)TNR ddPTM_KYSE-520_SHP099_60min_R1 1 TSLPTVGPSGLYSPSTNR 18 0 Q6VMQ6-2;Q6VMQ6-5;Q6VMQ6;Q6VMQ6-4 Q6VMQ6-2 ATF7IP Activating transcription factor 7-interacting protein 1 1 TSLPTVGPS(0.07)GLY(0.055)S(0.07)PS(0.402)T(0.402)NR 53.236999999999995 0.06484 552100000.0 187650.0 268540.0 195700.0 188420.0 183720.0 276640.0 178800.0 232920.0 226990.0 201130.0 True False 177240.68042899924 255638.93531324214 208315.13513107115 206327.3801494611 198177.7187761918 274913.3871456022 196874.84891983893 232112.05488393686 185774.33795224596 199348.14467677227 0.8891012289900235 1.282374289099811 1.0449815596169112 1.035010285568522 0.9941287344184806 1.3790616792112773 0.9875930836429725 1.1643552301943354 0.9319090391007391 1.0 17.604930652743835 -9.782864199005274 6.369977393001462 0.9999999984359196 1.0886191250377157 0.02128868908619297 0.14693950460029234 3.0517672857238077e-09 6.249111485967634e-10 0.13356911868645685 0.032395269203444856 1.6486778415232713e-10 9.782864199005274 0.08861912660179616 TSLS(ph)PTSK ddPTM_KYSE-520_SHP099_60min_R1 6 TSLSPTSK 8 0 Q8NDI1-3;Q8NDI1-2;Q8NDI1;H7C0Q4 Q8NDI1-3 EHBP1 EH domain-binding protein 1 1 TSLS(0.904)PT(0.09)S(0.006)K;TSLS(0.976)PT(0.021)S(0.003)K;TSLS(1)PTSK;TSLS(1)PTSK;TSLS(0.896)PT(0.093)S(0.011)K;TSLS(1)PTSK 166.66 0.00016452 16376700000.0 33728900.0 34050800.0 28946500.0 26599800.0 27692100.0 36331700.0 31404500.0 38268800.0 45247400.0 40035400.0 True False 31857890.680104777 32414948.456707224 30812437.706037577 29127836.99447854 29871310.72350415 36104940.38374015 34579173.33838409 38136054.46480508 37031612.75413206 39680717.503069885 0.8028557114079428 0.8168942120111475 0.7765090866528254 0.7340551992847678 0.7527915976114384 0.9098862786678921 0.8714351834920547 0.9610727039362305 0.9332394947562912 1.0 25.24193477685069 -6.621129537889079 1.4444190219165118 0.9557626969928247 0.7769663587998584 0.813032977213508 0.037962108012282704 0.1824252684308391 0.7760852264042577 0.021765558191644246 0.014589014189804793 2.392602003749998e-07 6.621129537889079 -0.17879633819296625 TSLVLNSDTCFENLTDPSS(ph)PTISSYENLLR ddPTM_KYSE-520_SHP099_60min_R1 1 TSLVLNSDTCFENLTDPSSPTISSYENLLR 30 0 Q8IX90-3;Q8IX90 Q8IX90-3 SKA3 Spindle and kinetochore-associated protein 3 1 TSLVLNSDTCFENLT(0.005)DPS(0.174)S(0.605)PT(0.206)IS(0.004)S(0.004)Y(0.003)ENLLR 72.791 0.013269 15176000.0 5144.2 9027.3 8649.0 4357.0 4664.3 7499.5 6167.9 8711.6 8448.4 10139.0 True False 4858.84097129154 8593.614957746448 9206.528378889283 4771.087970020183 5031.353873763289 7452.6928387017215 6791.411524903093 8681.381492902723 6914.383526832688 10049.176348022633 0.48350638928210365 0.8551561501293989 0.9161475587699128 0.474774031700517 0.5006732591326556 0.7416222564517122 0.6758177277125237 0.8638898544765762 0.6880547506953866 1.0 13.294789639429398 -8.422182170767027 0.6516330194285848 1.0023906717270528 0.6691330535177425 0.2928448215719739 0.15123909098551874 2.0758786227122314 1.6254350826905555 0.18368966539037648 0.0640204155289629 3.782838750818874e-09 8.422182170767027 -0.3332576182093102 TSNS(ph)LTEDSK ddPTM_KYSE-520_SHP099_60min_R1 2 TSNSLTEDSK 10 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 TSNS(0.998)LT(0.002)EDSK;TSNS(0.893)LT(0.107)EDSK 171.99 0.000126 459280000.0 1319370.0 1327350.0 1190390.0 1074900.0 1157620.0 1189030.0 1145990.0 1194980.0 1602520.0 1190040.0 True False 1246181.9160011113 1263582.1136070308 1267124.4440913408 1177058.1728195294 1248718.1080431917 1181608.8227217174 1261837.8529845967 1190834.8932904296 1311542.7642417415 1179497.17143711 1.0565365870973238 1.0712888035733659 1.0742920583247053 0.9979321708634461 1.0586868186565825 1.001790297879252 1.0698099864429196 1.009612334923623 1.1119507498638135 1.0 20.169740528165605 TSPDTLRR ddPTM_KYSE-520_SHP099_60min_R1 4 TSPDTLRR 8 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 0 ;;; 154.49 0.00079844 925990000.0 1446780.0 1454800.0 1145270.0 820910.0 1228260.0 1160000.0 794780.0 924900.0 1249360.0 912560.0 False True 1366524.2293155743 1384909.2243006804 1219095.9366967897 898929.0395844086 1324917.0741565716 1152760.0097198493 875124.1187053096 921691.7377732839 1022507.717802624 904475.428360937 1.5108472673403057 1.5311739610332709 1.347848596513007 0.9938678391887557 1.4648458461249148 1.2745067180087424 0.9675488037206085 1.0190345794617612 1.1304980607992652 1.0 19.78672178451015 -2.03640517482798 0.23319478269223545 0.9707952753354949 3.2250845781686324 0.5819744295527578 0.14049477618229225 23.157171580877645 0.4641584778541832 0.217276226844361 18.123945701666592 0.009195912392206936 2.03640517482798 2.254289302833137 TSPRPAS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 3 TSPRPASPAR 10 1 O15047 O15047 SETD1A Histone-lysine N-methyltransferase SETD1A 1 T(0.003)S(0.003)PRPAS(0.994)PAR;T(0.002)S(0.008)PRPAS(0.99)PAR;T(0.003)S(0.019)PRPAS(0.979)PAR 76.58800000000001 0.010041 928320000.0 370370.0 346600.0 320592.0 277055.0 300409.0 298651.0 264592.0 308848.0 366600.0 294863.0 True False 349824.8377857099 329948.8157427933 341257.8732853365 303386.22390037694 324049.4792066026 296787.0083300365 291339.54152907163 307776.67837366514 300034.6812339457 292250.74321994284 1.1970023888782304 1.1289922212258654 1.1676886413544951 1.038102488834575 1.1088063477146697 1.0155218257449554 0.9968821236147022 1.0531253915136762 1.0266344507057243 1.0 18.15684716810174 -5.1720248311352846 0.6715741305921739 1.0168530644814462 1.2096622113483715 0.775850228941286 0.03243985709258031 0.5819069979213861 0.41663913108661194 0.017055341826874754 0.073211661561533 6.729381794042859e-06 5.1720248311352846 0.1928091468669253 TSPTTPEASATNS(ph)PCTSKPATPAPSEK ddPTM_KYSE-520_SHP099_60min_R1 2 TSPTTPEASATNSPCTSKPATPAPSEK 27 1 Q12873-3;Q12873-2;Q12873 Q12873-3 CHD3 Chromodomain-helicase-DNA-binding protein 3 1 TSPTTPEASAT(0.006)NS(0.941)PCT(0.047)S(0.006)KPATPAPSEK;TSPTTPEAS(0.004)AT(0.037)NS(0.949)PCT(0.007)S(0.002)KPATPAPSEK 276.1 1.2822999999999998e-41 555890000.0 511960.0 611860.0 418950.0 391890.0 375970.0 640970.0 430330.0 620420.0 607790.0 575990.0 True False 483560.5582330428 582465.3271794156 445956.1873437011 429135.10777397535 405556.7000233224 636969.4684742511 473831.9560160753 618267.9078271167 497430.6571390604 570887.176713439 0.8470334909550254 1.020280978340819 0.7811634339223422 0.7516986285179477 0.7103972843777756 1.1157536803353048 0.8299922915485605 1.0829949122109301 0.8713291827690662 1.0 19.122846131270336 -6.255932249367665 24.983488841026624 0.9758248372051442 0.8269369216335493 0.33566208492022076 0.11088721163975201 598.3949497046882 2714663.865283449 0.03752129757110089 0.036525390781739456 5.547122422035206e-07 6.255932249367665 -0.14888791557159498 TSPVVAPTS(ph)EPS(ph)SPLHTQLLKDPEPAFQR ddPTM_KYSE-520_SHP099_60min_R1 1 TSPVVAPTSEPSSPLHTQLLKDPEPAFQR 29 1 B7ZM87;O75044 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 2 TSPVVAPT(0.15)S(0.85)EPS(0.583)S(0.415)PLHT(0.002)QLLKDPEPAFQR 105.48 0.0017564 645270000.0 176010.0 174360.0 132090.0 209560.0 156030.0 189350.0 149450.0 222240.0 240080.0 190480.0 True False 166246.3744327639 165983.48388030447 140604.7327514727 229476.5193934883 168308.6733107405 188168.19641418365 164557.86449144248 221469.101311206 196487.52392429247 188792.49539119747 0.8805772395151847 0.8791847553917311 0.7447580607487879 1.2154959810133836 0.8915008669279338 0.9966932002476041 0.8716335050843078 1.1730821230594957 1.0407591865193058 1.0 17.52644189232996 -5.2398788975942745 24.995546441767797 1.020850200108085 0.8392744986406906 0.40450354008712397 0.10663264618666267 866.0632846626067 1004045.2196521404 0.028668067632437406 0.04960237362004143 5.756004203288891e-06 5.2398788975942745 -0.18157570146739443 TSPVVAPTS(ph)EPSS(ph)PLHTQLLK ddPTM_KYSE-520_SHP099_60min_R1 2 TSPVVAPTSEPSSPLHTQLLK 21 0 B7ZM87;O75044;A0A075B7E9 B7ZM87 SRGAP2 SLIT-ROBO Rho GTPase-activating protein 2 2 TSPVVAPT(0.153)S(0.847)EPS(0.217)S(0.782)PLHT(0.002)QLLK;TSPVVAPT(0.098)S(0.902)EPS(0.24)S(0.753)PLHT(0.007)QLLK 133.95 2.0125e-06 581080000.0 575730.0 516840.0 426510.0 692430.0 528220.0 617250.0 691240.0 796140.0 773230.0 675120.0 True False 543793.1092106986 492010.2306073442 454003.51704012795 758238.3390133288 569787.9088393212 613397.5137927381 761117.2850522894 793378.3761604738 632830.9235420716 669138.9620354126 0.8126759015146389 0.7352885701211129 0.6784891372326051 1.1331552667429352 0.8515240348673144 0.9166967529836881 1.137457730360064 1.1856705724430467 0.9457391654748398 1.0 19.351946325095483 -5.463492202427866 0.8722222167156326 1.0586508770004286 0.7230265122197015 0.4627248728811715 0.1215884283202875 0.6207347417258664 0.9367023370549183 0.05776421928194856 0.1409107342901421 3.4395988697822223e-06 5.463492202427866 -0.3356243647807271 TSQEGS(ph)S(ph)DDAER ddPTM_KYSE-520_SHP099_60min_R1 4 TSQEGSSDDAER 12 0 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1 P46100-2 ATRX Transcriptional regulator ATRX 2 TSQEGS(1)S(1)DDAER;TS(0.002)QEGS(0.999)S(0.999)DDAER;T(0.026)S(0.028)QEGS(0.977)S(0.969)DDAER;TS(0.001)QEGS(0.999)S(1)DDAER 95.06700000000001 0.0028640000000000002 213068000.0 648707.0 535717.0 523223.0 651968.0 627342.0 651160.0 742545.0 571481.0 733545.0 598794.0 True False 612721.9295446563 509980.351192389 556950.7917664001 713930.8426986733 676710.2463122889 647095.8689044621 817608.6951408371 569498.6657956685 600351.7191646328 593489.1510146826 1.0324062849288678 0.859291783717496 0.9384346635725132 1.2029383207394317 1.1402234483230638 1.0903246804059157 1.3776303976963682 0.9595772135379428 1.011563089465439 1.0 19.178862132070847 -5.242404365587582 22.440860851021444 1.121438619886966 0.934968853072659 0.2925726908891526 0.11910061093832397 260.1654499878417 306712.43328393117 0.03268987731867086 0.05644068333145081 5.722629567283534e-06 5.242404365587582 -0.18646976681430694 TSQGGAGVS(ph)PLLVK ddPTM_KYSE-520_SHP099_60min_R1 1 TSQGGAGVSPLLVK 14 0 H0Y9K9;G5E9Z1;A0A590UJE4;A0A494C0H4;H0Y9M2;Q17R98-3;Q17R98-2;Q17R98;A0A5F9ZGW8 H0Y9K9 ZNF827 Zinc finger protein 827 1 TSQGGAGVS(1)PLLVK 105.39 0.0006859 245470000.0 429620.0 422930.0 343920.0 350780.0 350540.0 556570.0 361120.0 460670.0 531680.0 559340.0 True False 405788.12217376236 402611.80796912784 366089.63349145616 384118.02573414706 378125.5037002306 553096.2401808415 397625.5337915674 459072.0432911866 435140.3145620953 554384.682759935 0.7319612803037717 0.7262318395320289 0.6603530813097587 0.6928727248052081 0.6820634037321881 0.9976759051626767 0.7172375899926351 0.8280749046055055 0.7849068130739173 1.0 19.080527871862234 -6.2055530056621375 24.996952386166313 0.8455627417100341 0.6977723868022642 0.48747548392943596 0.08431573422856059 276.3602556472092 123610.7609410208 0.026664261784301424 0.026664252317756747 6.229411127967478e-07 6.2055530056621375 -0.14779035490776993 TSQLGDS(ph)PFYPGK ddPTM_KYSE-520_SHP099_60min_R1 4 TSQLGDSPFYPGK 13 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 TSQLGDS(1)PFYPGK;TSQLGDS(1)PFYPGK;TSQLGDS(1)PFYPGK;TSQLGDS(0.992)PFY(0.008)PGK 180.7 1.5213e-07 4925900000.0 5493200.0 5893400.0 4931160.0 4373030.0 4600620.0 4994050.0 4419390.0 5291640.0 6065200.0 5393900.0 True False 5188481.245577285 5610272.21782625 5249030.463734961 4788641.4564005835 4962662.620052926 4962880.281501215 4866145.0702899685 5273284.535918066 4963912.571249665 5346114.242390703 0.9705144728177513 1.049411210359287 0.9818403097550853 0.8957237423828739 0.9282747047757993 0.928315418729602 0.9102209286335603 0.9863770762893258 0.9285085103287797 1.0 22.35005923652909 -5.007565319610608 23.909184624543933 0.9370389685230306 1.0113785887455267 0.40493907614711055 0.034880557869134375 168.46658672637943 532427.8944362821 0.00883210346101094 0.017193977588045313 9.827310552401624e-06 5.007565319610608 0.07433962022249607 TSQVGAASAPAKES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 16 TSQVGAASAPAKESPR 16 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAAS(0.001)APAKES(0.999)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAAS(0.013)APAKES(0.987)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR;TSQVGAAS(0.001)APAKES(0.999)PR;TSQVGAASAPAKES(1)PR;TSQVGAASAPAKES(1)PR 343.12 1.5109999999999998e-58 463354863000.0 146974130.0 129867751.0 122804149.0 115090650.0 115916548.0 129960157.0 121158590.0 130291868.0 151033510.0 127168044.0 True False 138821182.02323556 123628709.30649152 130720300.93812554 126028830.7727342 125038520.85266128 129149027.4538905 133406482.67108887 129839915.92025857 123609631.8289523 126041434.065401 1.1013932287631965 0.9808576855952182 1.0371216569171748 0.999900006749683 0.9920429879255473 1.0246553318877427 1.0584335513182614 1.0301367711580192 0.9807063268164112 1.0 26.909322833254965 -4.247216401472383 24.583190180826307 1.0141829150332515 1.101393304638578 0.5466045635917257 0.02444399414768397 1670.593468024323 2887417.18883709 0.00621750116065659 0.12819530791707265 5.659572120202434e-05 4.247216401472383 0.08721038960532645 TSQVGAASAPAKES(ph)PRK ddPTM_KYSE-520_SHP099_60min_R1 10 TSQVGAASAPAKESPRK 17 2 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 TSQVGAASAPAKES(1)PRK;TSQVGAASAPAKES(1)PRK;TSQVGAAS(0.001)APAKES(0.999)PRK;TSQVGAASAPAKES(1)PRK;TSQVGAASAPAKES(1)PRK;TSQVGAASAPAKES(1)PRK;TSQVGAASAPAKES(1)PRK;TSQVGAASAPAKES(1)PRK;TSQVGAASAPAKES(1)PRK;TSQVGAAS(0.033)APAKES(0.967)PRK 212.05 4.5857e-18 35049170000.0 13201900.0 11318430.0 11144560.0 10000260.0 10340010.0 11600560.0 10287270.0 11149000.0 13868880.0 11288350.0 True False 12469564.289664824 10774675.6334902 11862956.169526452 10950681.703712208 11153709.960390868 11528156.602030752 11327207.645680038 11110326.721196156 11350640.998013744 11188344.001203397 1.114513844794513 0.963026845825557 1.060295980196041 0.9787580452061873 0.9969044533481627 1.0303720193793473 1.0124114564641296 0.9930269144389152 1.01450589978221 1.0 23.41549318148656 -4.246349106779504 24.88227912995461 1.0068648042354018 1.1145139270497808 0.6200434854475826 0.025585563281609387 1693.5236885484649 2792397.590849633 0.005926342727788912 0.13678188796916008 5.6708856909143517e-05 4.246349106779504 0.107649122814379 TSRPENAIIYNNNEDFQVGQAK ddPTM_KYSE-520_SHP099_60min_R1 2 TSRPENAIIYNNNEDFQVGQAK 22 1 P29401;P29401-2;A0A0B4J1R6 P29401 TKT Transketolase 0 ; 213.48 2.3976e-19 3113800000.0 1757830.0 1326170.0 927010.0 1340040.0 1225510.0 1333780.0 1458040.0 1486470.0 1073660.0 1023440.0 False True 1660319.6657527692 1262458.8025782462 986766.5478684416 1467396.998702282 1321950.6648019308 1325455.3842794313 1605432.9122991145 1481313.7825147053 878710.4087660608 1014373.1178242714 1.636793835106739 1.2445704449326236 0.9727846001922417 1.4466047777860098 1.3032193396818148 1.3066743991820289 1.5826847972298468 1.4603243683073688 0.8662595580714979 1.0 19.95215698717014 -7.764412573109985 24.99864111575778 0.9331295893030955 1.3572502806396576 0.48450542637126415 0.17958426634655672 72.08123239081006 606006.9020927243 0.15623247643878727 0.04712023264676797 1.7202336029188963e-08 7.764412573109985 0.42412069133656205 TSS(ph)ASRPASLPR ddPTM_KYSE-520_SHP099_60min_R1 3 TSSASRPASLPR 12 1 Q69YQ0-2;Q69YQ0;A0A494C1J1 Q69YQ0-2 SPECC1L Cytospin-A 1 TSS(0.969)AS(0.024)RPAS(0.006)LPR;T(0.001)S(0.005)S(0.944)AS(0.019)RPAS(0.032)LPR;TS(0.001)S(0.923)AS(0.036)RPAS(0.04)LPR 164.06 4.9845e-06 5219030000.0 5171600.0 4640600.0 5035560.0 4872770.0 4713490.0 4850000.0 4517920.0 4963730.0 5811600.0 4840620.0 True False 4884721.038670995 4417658.610317392 5360160.254780871 5335876.595748283 5084414.846910474 4819729.350983846 4974635.4442501 4946511.979173289 4756359.938513902 4797735.872745375 1.018130461582881 0.9207798693990018 1.117227041453131 1.1121655583542933 1.059752971353351 1.0045841369391362 1.0368714694174066 1.0310096492124692 0.9913759457942405 1.0 22.193922305202868 -9.181620755082832 11.854551367664492 0.999999999999922 1.0340612354896035 0.030362554766244387 0.054287661740854296 0.0 0.0 0.05591571778611039 0.013561553562609487 6.582323837369453e-10 9.181620755082832 0.03406123548968154 TSS(ph)DPVLLK ddPTM_KYSE-520_SHP099_60min_R1 10 TSSDPVLLK 9 0 Q9BRG2;Q9BRG2-2 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 T(0.002)S(0.007)S(0.991)DPVLLK;TSS(1)DPVLLK;TS(0.004)S(0.996)DPVLLK;TS(0.004)S(0.996)DPVLLK;TS(0.002)S(0.998)DPVLLK;TSS(1)DPVLLK;TSS(1)DPVLLK;TSS(1)DPVLLK;TS(0.002)S(0.998)DPVLLK;T(0.001)S(0.023)S(0.976)DPVLLK 216.43 6.320100000000001e-09 64533700000.0 79813500.0 69497400.0 64306400.0 57678800.0 62926600.0 66689700.0 62124400.0 66694400.0 77746500.0 64124500.0 True False 75386086.05073236 66158640.58627587 68451693.4378779 63160575.81023644 67878565.4166227 66273464.84501191 68404540.627716 66463052.69298999 63629695.4297735 63556406.81810608 1.1861288235894452 1.040943689211651 1.0770227088794018 0.9937719731544535 1.068005081075246 1.0427503404130738 1.076280803971265 1.045733326039065 1.0011531270462972 1.0 25.921534227975496 -4.261206271728786 24.46682119865763 1.0418921031247164 1.1861288690900271 0.6882807890887968 0.029740847954546186 7.914593834314513 830002.393433887 0.007070642746359895 0.0401379179785256 5.4801661810803445e-05 4.261206271728786 0.14423676596531076 TSS(ph)EASMDAAYLDK ddPTM_KYSE-520_SHP099_60min_R1 3 TSSEASMDAAYLDK 14 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 T(0.005)S(0.034)S(0.962)EASMDAAYLDK;TSS(1)EASMDAAYLDK;TS(0.001)S(0.999)EASMDAAYLDK 389.81 1.4786999999999997e-81 1601120000.0 3988340.0 3946150.0 3003780.0 3251920.0 3332310.0 4114400.0 3513550.0 4208800.0 4515400.0 4027710.0 True False 3767098.8296413226 3756571.0307080895 3197408.4650179306 3560981.499074602 3594543.838749681 4088720.5034408104 3868733.9229435083 4194200.655141303 3695517.1839709664 3992027.6229109606 0.9436555017859267 0.9410182958525779 0.8009484820865045 0.8920232612213133 0.9004306027643574 1.0242214958571207 0.9691150183280678 1.0506441967159834 0.9257243518961974 1.0 21.928690272789623 -6.217675479688324 7.868499799100649 0.9955142785555545 0.8924209753219295 0.513253675599338 0.04781767321012456 0.2463201922663981 40.354567949799026 0.015968274002580184 0.015885802684587863 6.057933760665572e-07 6.217675479688324 -0.10309330323362498 TSS(ph)EDNLY(ph)LAVLR ddPTM_KYSE-520_SHP099_60min_R1 2 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 2 TS(0.001)S(0.999)EDNLY(1)LAVLR;T(0.006)S(0.003)S(0.991)EDNLY(1)LAVLR 246.63 1.2951999999999998e-24 146665000.0 518530.0 504220.0 409170.0 443530.0 414880.0 356070.0 317230.0 437660.0 448230.0 400370.0 True False 489766.10723607166 479996.51435035036 435545.75289514754 485682.9578478431 447528.69565570645 353847.6350525402 349298.7042664454 436141.8596106122 366842.7309587874 396823.0332831463 1.2342179413930527 1.2095984206840562 1.0975818346319917 1.2239283436485713 1.1277790302469162 0.8917013514184251 0.8802379775601618 1.099084032502243 0.9244491881524252 1.0 18.59813624269927 -6.108456412309921 4.749175218142071 0.9613645841353774 1.1850295153244446 0.7287485617960769 0.06769958858849087 0.12708567501870283 4.506028023287711 0.023178335153398646 0.02337971147232469 7.79010995574534e-07 6.108456412309921 0.22366493118906716 TSS(ph)EDNLYLAVLR ddPTM_KYSE-520_SHP099_60min_R1 38 TSSEDNLYLAVLR 13 0 Q15149-4 Q15149-4 PLEC Plectin 1 TS(0.014)S(0.986)EDNLYLAVLR;TS(0.002)S(0.997)EDNLYLAVLR;T(0.007)S(0.099)S(0.894)EDNLYLAVLR;TS(0.001)S(0.999)EDNLYLAVLR;TSS(1)EDNLYLAVLR;T(0.002)S(0.001)S(0.997)EDNLYLAVLR;TSS(1)EDNLYLAVLR;T(0.001)S(0.035)S(0.964)EDNLYLAVLR;T(0.011)S(0.105)S(0.884)EDNLYLAVLR;T(0.001)S(0.029)S(0.971)EDNLYLAVLR;TS(0.023)S(0.976)EDNLYLAVLR;T(0.003)S(0.058)S(0.94)EDNLYLAVLR;TS(0.002)S(0.998)EDNLYLAVLR;TS(0.005)S(0.995)EDNLYLAVLR;TSS(1)EDNLYLAVLR;TS(0.024)S(0.975)EDNLYLAVLR;T(0.044)S(0.183)S(0.773)EDNLYLAVLR;TSS(1)EDNLYLAVLR;TS(0.002)S(0.998)EDNLYLAVLR;T(0.002)S(0.048)S(0.95)EDNLYLAVLR;T(0.002)S(0.034)S(0.963)EDNLYLAVLR;TS(0.039)S(0.961)EDNLYLAVLR;T(0.038)S(0.001)S(0.961)EDNLYLAVLR;T(0.002)S(0.006)S(0.992)EDNLYLAVLR;TS(0.005)S(0.994)EDNLYLAVLR;TS(0.001)S(0.999)EDNLYLAVLR;TSS(1)EDNLYLAVLR;T(0.018)S(0.042)S(0.941)EDNLYLAVLR;T(0.001)S(0.025)S(0.975)EDNLYLAVLR;T(0.006)S(0.04)S(0.954)EDNLYLAVLR;T(0.037)S(0.151)S(0.812)EDNLYLAVLR;T(0.003)S(0.057)S(0.94)EDNLYLAVLR;T(0.001)S(0.042)S(0.957)EDNLYLAVLR;T(0.001)S(0.008)S(0.991)EDNLYLAVLR;TSS(1)EDNLYLAVLR;TS(0.022)S(0.977)EDNLYLAVLR;TSS(1)EDNLYLAVLR;TS(0.021)S(0.979)EDNLYLAVLR 354.93 2.235e-53 1120397228000.0 438469862.0 428432970.0 377688229.0 347525976.0 368716521.0 400071948.0 358534237.0 417630546.0 480493490.0 375229737.0 True False 414147064.6868597 407850407.03020114 402034616.5638725 380554740.2715455 397732413.4926729 397574950.5733781 394778376.63291216 416181883.11162835 393247984.4711837 371905493.4544978 1.1135814661945296 1.0966506658501434 1.0810128477251466 1.0232565718153501 1.069444846856867 1.0690214518759749 1.0615018696442375 1.1190527981876872 1.0573868668043678 1.0 28.470360817403808 -11.723459724188034 1.2699510142860544 0.3675307590060777 1.0762565305267187 0.4259768705461715 0.026729153069200054 130452.10101803685 5723.590265753934 235240.65482210458 0.00806925632379882 1.8903415304665126e-12 11.723459724188034 0.708725771520641 TSS(ph)FTEQLDEGTPNR ddPTM_KYSE-520_SHP099_60min_R1 9 TSSFTEQLDEGTPNR 15 0 E7EVX2;Q13439-3;Q13439-4;Q13439;Q13439-5;Q86W71;C9J0Y3;C9JHJ5 E7EVX2 GOLGA4 Golgin subfamily A member 4 1 TS(0.011)S(0.98)FT(0.008)EQLDEGTPNR;T(0.018)S(0.214)S(0.702)FT(0.066)EQLDEGTPNR;T(0.225)S(0.225)S(0.549)FTEQLDEGTPNR;T(0.001)S(0.039)S(0.933)FT(0.028)EQLDEGTPNR;T(0.004)S(0.055)S(0.906)FT(0.036)EQLDEGTPNR;TSS(0.997)FT(0.003)EQLDEGTPNR;T(0.016)S(0.016)S(0.922)FT(0.046)EQLDEGTPNR;TS(0.014)S(0.876)FT(0.11)EQLDEGTPNR;T(0.002)S(0.046)S(0.781)FT(0.172)EQLDEGTPNR 378.72 8.433099999999999e-69 12193960000.0 10551090.0 10281800.0 8966110.0 7892250.0 8611820.0 10545640.0 9048960.0 10383270.0 12482820.0 10484490.0 True False 9965800.004623553 9787846.89470356 9544079.79688322 8642327.067108506 9289521.239446903 10479820.749053475 9963717.186139066 10347252.859843435 10216254.554284548 10391605.575409794 0.9590240826890266 0.9418993844286256 0.9184413060738064 0.8316642702027973 0.893944749156876 1.0084890802488145 0.9588236499003326 0.9957318707639065 0.9831257046995521 1.0 23.308915242103875 -6.2578142154495895 24.990812594686783 0.9870666533288853 0.9070514611193315 0.5844382387799084 0.03378572462843386 255.97197760188263 1764597.4161752088 0.012551733873231835 0.012090054505549263 5.523136601047574e-07 6.2578142154495895 -0.08001519220955378 TSS(ph)GLGGSTTDFLEEWK ddPTM_KYSE-520_SHP099_60min_R1 4 TSSGLGGSTTDFLEEWK 17 0 A0A0B4J260;F8W1M8;Q96IZ0 A0A0B4J260 PAWR PRKC apoptosis WT1 regulator protein 1 TS(0.013)S(0.987)GLGGSTTDFLEEWK;T(0.023)S(0.023)S(0.953)GLGGSTTDFLEEWK;TS(0.022)S(0.977)GLGGSTTDFLEEWK;T(0.145)S(0.145)S(0.71)GLGGSTTDFLEEWK 361.23 7.099399999999999e-72 223176000.0 666636.0 679129.0 630533.0 591496.0 613848.0 693368.0 599032.0 662199.0 809550.0 710841.0 True False 629656.37217408 646502.6234465886 671178.1660684696 647711.6020002428 662154.3452826459 689040.4331201996 659588.0005489308 659901.9862274077 662556.1270947646 704543.5017659297 0.893708295649387 0.917619170180603 0.9526426180727943 0.919335144496772 0.9398345788769097 0.977995583513478 0.9361920149652669 0.936637673292524 0.940404851416663 1.0 19.426329262369023 -8.592403564081382 0.009545700111376837 1.927877910313286 3.843672766474834e-07 0.5859966307358522 0.018514391134747208 2154.738535418384 8.1433204959917 843.0194963626236 800.9641778175068 2.556209449236315e-09 8.592403564081382 -1.9278775259460093 TSS(ph)IADEGTYTLDSILR ddPTM_KYSE-520_SHP099_60min_R1 8 TSSIADEGTYTLDSILR 17 0 A0A087WY00;G3V394;F8WE88;F8W6H6;Q9Y4I1-2;Q9Y4I1;Q9Y4I1-3;E7ERV5 A0A087WY00 MYO5A Unconventional myosin-Va 1 TS(0.021)S(0.979)IADEGTYTLDSILR;T(0.025)S(0.025)S(0.951)IADEGTYTLDSILR;TSS(1)IADEGTYTLDSILR;TSS(1)IADEGTYTLDSILR;T(0.061)S(0.061)S(0.879)IADEGTYTLDSILR;TSS(1)IADEGTYTLDSILR;TS(0.005)S(0.995)IADEGTYTLDSILR;T(0.001)S(0.03)S(0.97)IADEGTYTLDSILR 391.29 2.1285e-86 7912650000.0 3952300.0 4104610.0 3251150.0 2908000.0 3203330.0 4673770.0 3965320.0 5113390.0 5773220.0 5062820.0 True False 3733058.040285277 3907418.374454787 3460724.331023926 3184375.445677919 3455413.8465454937 4644599.267783044 4366173.243393822 5095652.843564201 4724948.779032837 5017967.353614358 0.7439382876009382 0.778685491375375 0.6896665695784616 0.6345946916901056 0.6886082756310913 0.9255937594806424 0.8701079412660865 1.015481465795884 0.9416061217754904 1.0 22.258671654074472 -6.300551012849461 4.955788369790385 0.949189679143247 0.7056231100407868 0.8507672811586917 0.05101594049618313 0.08305957694215386 5.114897054931065 0.01973989173121059 0.01772694793150728 5.005517535524636e-07 6.300551012849461 -0.24356656910246022 TSS(ph)KES(ph)SPIPS(ph)PTSDR ddPTM_KYSE-520_SHP099_60min_R1 3 TSSKESSPIPSPTSDR 16 1 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.023)S(0.032)S(0.941)KES(0.502)S(0.502)PIPS(0.697)PT(0.285)S(0.019)DR;T(0.014)S(0.091)S(0.836)KES(0.658)S(0.4)PIPS(0.632)PT(0.358)S(0.01)DR;T(0.013)S(0.016)S(0.969)KES(0.618)S(0.384)PIPS(0.589)PT(0.365)S(0.047)DR 157.98 7.8057e-07 1484570000.0 3060780.0 2671550.0 2483280.0 2478190.0 2693060.0 2579600.0 2411080.0 2645180.0 3254030.0 2562000.0 True False 2890992.4318863386 2543204.7279216982 2643356.202188486 2713716.43250501 2904988.5005846494 2563499.759545963 2654815.4962731833 2636004.4879696555 2663180.179420881 2539302.673205838 1.1384985580456608 1.0015366638869143 1.0409772060970115 1.0686856912094598 1.144010334505393 1.0095290280262559 1.0454899781291183 1.0380820355856724 1.04878406482306 1.0 21.276000937175997 -8.10358904937868 0.42857898422932644 0.9973932043989467 1.069310858801305 0.18483064883324551 0.043883683171629474 2.6944188399867817 1.225162439593337 0.06701972088463627 0.03206471873779639 7.877908832755059e-09 8.10358904937868 0.0719176544023582 TSS(ph)KES(ph)SPIPS(ph)PTSDRK ddPTM_KYSE-520_SHP099_60min_R1 3 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.386)S(0.169)S(0.506)KES(0.793)S(0.144)PIPS(0.886)PT(0.062)S(0.053)DRK;T(0.06)S(0.068)S(0.8)KES(0.608)S(0.463)PIPS(0.706)PT(0.136)S(0.159)DRK;T(0.306)S(0.336)S(0.368)KES(0.495)S(0.495)PIPS(0.762)PT(0.124)S(0.114)DRK 79.17699999999999 0.004957100000000001 8158500000.0 5767000.0 5112900.0 4725730.0 5056580.0 5036330.0 4928140.0 4714890.0 5191590.0 6544300.0 4967870.0 True False 5447093.013770523 4867268.609380636 5030358.117235349 5537155.842883782 5432660.518202143 4897381.650259281 5191517.094092058 5173581.586016209 5356020.088377828 4923858.536744374 1.1062651319329146 0.9885069956942438 1.0216292933065034 1.1245562401037048 1.1033339966330928 0.9946227361554949 1.054359514057985 1.0507169422939902 1.087768880524987 1.0 22.231357882879063 -10.164188577294611 4.032154542608124 0.9999769384777277 1.0568530856053802 0.13426385462628276 0.044687715337970765 9.98914207201904e-06 2.070508217862234e-06 0.04437613688838348 0.01075820667081215 6.851906416116953e-11 10.164188577294611 0.05687614712765243 TSS(ph)KES(ph)SPIPSPTSDRK ddPTM_KYSE-520_SHP099_60min_R1 2 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.309)S(0.34)S(0.375)KES(0.511)S(0.462)PIPS(0.002)PTSDRK;T(0.12)S(0.143)S(0.737)KES(0.517)S(0.429)PIPS(0.042)PT(0.007)S(0.006)DRK 89.462 0.0013722 2176510000.0 2635570.0 2033810.0 1882730.0 1969830.0 2120010.0 1752510.0 1972290.0 1937810.0 2237130.0 1767830.0 True False 2489369.6782214595 1936102.7147889545 2004093.7882745068 2157042.0509490166 2286842.725793131 1741571.9350294229 2171668.320895464 1931088.1893982547 1830923.5854579825 1752168.4015509295 1.4207365433699166 1.1049752484265871 1.1437792089507983 1.2310700552753455 1.3051500779085705 0.993952369810957 1.2394175805095073 1.1021133514843406 1.044947268674257 1.0 20.740710008879084 -1.0000000000726412 0.08701907036300141 0.8644537292497573 2.0032924625013364 0.39455595668689547 0.10247399980358325 190.90703041608165 1.2021763955327207 2.146826084672891 25.98961730968548 0.09999999998327375 1.0000000000726412 1.1388387332515792 TSS(ph)KESS(ph)PIPS(ph)PTSDRK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.08)S(0.097)S(0.823)KES(0.396)S(0.604)PIPS(0.564)PT(0.369)S(0.067)DRK 123.12 5.0069e-05 1895200000.0 2870900.0 2732000.0 2683900.0 2750700.0 2616600.0 2624800.0 2396800.0 2711400.0 3591900.0 2716200.0 True False 2711645.4540027385 2600750.6191843986 2856908.4883918343 3012125.700971887 2822511.5335825337 2608417.649579879 2639091.934513812 2701994.786245519 2939701.504430466 2692136.5811716225 1.0072466133284463 0.9660544852640973 1.0612048840213384 1.1188606558962193 1.048428060196772 0.968902420413117 0.9802964503997321 1.003661851758504 1.0919585302581871 1.0 21.360320173915984 -6.204745283225364 24.99784405528628 1.007400836611023 1.0417502463896051 0.0970402378944013 0.047670720148355036 747.8334036157455 329737.72800997354 0.017316568156285392 0.01731656740290799 6.241007676600562e-07 6.204745283225364 0.03434940977858214 TSS(ph)KESS(ph)PIPSPTSDRK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.105)S(0.087)S(0.8)KES(0.452)S(0.517)PIPS(0.038)PT(0.001)S(0.001)DRK 86.546 0.0015525 1926100000.0 1155500.0 946580.0 841320.0 775820.0 869180.0 828960.0 801310.0 775430.0 987010.0 714770.0 True False 1091402.1115678565 901104.8759544526 895552.8333595942 849553.699541211 937579.5210422946 823786.1531529017 882314.2348319682 772740.2143167227 807793.864497318 708437.6938826453 1.5405760040609164 1.271960658976064 1.2641236358436132 1.1991932485765529 1.323446690002928 1.162820894859618 1.245436602894998 1.0907666559661198 1.1402468720575043 1.0 19.43428145012181 -1.0000000000000002 0.15349675924292713 0.9850911509057355 2.6543990575478755 0.740131308522042 0.07096281261720351 35.93418040132199 0.36031950171454435 0.23619563948087505 13.430572753172711 0.09999999999999995 1.0000000000000002 1.66930790664214 TSS(ph)KESSPIPS(ph)PTSDRK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 2 T(0.323)S(0.104)S(0.554)KES(0.261)S(0.123)PIPS(0.447)PT(0.102)S(0.086)DRK 79.172 0.006551899999999999 727510000.0 1058700.0 899750.0 861020.0 841330.0 960290.0 793620.0 809240.0 715270.0 991900.0 694930.0 True False 999971.8005338742 856524.6594477171 916522.7268807105 921289.7502449113 1035859.3596973063 788666.7232016092 891045.8766213097 712788.8953152726 811795.9637641865 688773.4608473596 1.4518152300811134 1.2435506129896214 1.3306591774792884 1.3375802097710034 1.5039188043379985 1.1450306494552744 1.2936704551959735 1.0348669567470967 1.178610980111631 1.0 19.3936700297129 -7.003108277884298 1.0783691813734226 1.0551457365384804 1.35666916727439 0.5962537501321862 0.0996981657192474 0.3709185358094928 0.8033123737197317 0.0765639106355296 0.035579343588074255 9.928684765423375e-08 7.003108277884298 0.3015234307359096 TSS(ph)LDTITGPYLTGQWPR ddPTM_KYSE-520_SHP099_60min_R1 6 TSSLDTITGPYLTGQWPR 18 0 Q86VQ1;H7C2L5;H7C0Q2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 T(0.072)S(0.072)S(0.855)LDTITGPYLTGQWPR;TS(0.024)S(0.975)LDTITGPYLTGQWPR;T(0.021)S(0.021)S(0.958)LDTITGPYLTGQWPR;TS(0.026)S(0.974)LDTITGPYLTGQWPR;T(0.1)S(0.1)S(0.799)LDTITGPYLTGQWPR;TS(0.035)S(0.965)LDTITGPYLTGQWPR 319.15 8.664099999999999e-48 9181200000.0 3900450.0 4014560.0 3254210.0 2810900.0 3190590.0 3622970.0 3165670.0 3586830.0 4280080.0 3657550.0 True False 3684084.263145696 3821694.511622591 3463981.583520099 3078047.0908720978 3441671.281026181 3600357.700357519 3485686.817561895 3574388.1239024196 3502925.3640365107 3625146.9525308423 1.0162579093721174 1.0542178183851365 0.9555423901096677 0.8490820182401724 0.9493880733920123 0.9931618628160668 0.9615297981585036 0.9859981321328267 0.9662850664828899 1.0 21.789608048145638 -9.72213903328562 14.04835624525768 0.9999964784827527 0.9689208625538286 0.030090803559566726 0.05037763705811234 0.0 0.0 0.0537952586124531 0.01304726667156249 1.8960988146030673e-10 9.72213903328562 -0.03107561592892416 TSS(ph)LTQFPPSQSEER ddPTM_KYSE-520_SHP099_60min_R1 7 TSSLTQFPPSQSEER 15 0 Q9H6Z4-3;Q9H6Z4;B7Z7F3;Q9H6Z4-2 Q9H6Z4-3 RANBP3 Ran-binding protein 3 1 T(0.001)S(0.033)S(0.966)LT(0.001)QFPPSQSEER;T(0.004)S(0.018)S(0.978)LTQFPPSQSEER;TS(0.019)S(0.981)LTQFPPSQSEER;T(0.021)S(0.021)S(0.958)LTQFPPSQSEER;T(0.019)S(0.056)S(0.916)LT(0.01)QFPPSQSEER;T(0.002)S(0.055)S(0.943)LTQFPPSQSEER;T(0.14)S(0.14)S(0.719)LT(0.001)QFPPSQSEER 204.9 7.5602e-12 2772490000.0 2452320.0 2415740.0 2063720.0 1861040.0 1977100.0 2523360.0 2100390.0 2556020.0 3025690.0 2737050.0 True False 2316284.9210212813 2299684.224300335 2196750.6932687494 2037912.682057921 2132686.5218398045 2507610.7742471327 2312717.919030988 2547153.7631995534 2476300.967437904 2712801.8663926786 0.8538349039479755 0.8477155124337619 0.8097718895297934 0.7512206133829505 0.7861563899156864 0.9243619319613648 0.852520026501715 0.9389383702343901 0.9128204304617132 1.0 21.371352251366705 -7.2717943061779735 0.739958972127221 0.9853508044152813 0.812054914087792 0.6615117444033745 0.042042317672144745 0.429073317276822 0.44946943034950265 0.041733249654800623 0.01967650813651332 5.3481760376025724e-08 7.2717943061779735 -0.17329589032748938 TSS(ph)PHKEES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 TSSPHKEESPK 11 1 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 2 T(0.03)S(0.036)S(0.934)PHKEES(1)PK;T(0.1)S(0.03)S(0.87)PHKEES(1)PK 163.9 1.2016e-05 2049240000.0 2982800.0 2648200.0 2491300.0 3760700.0 2632500.0 3163800.0 2961000.0 2558200.0 3675900.0 3558600.0 True False 2817338.13793562 2520976.4969707597 2651893.1842209403 4118115.797304314 2839662.77312391 3144053.5506479754 3260326.7765751863 2549326.2012883686 3008449.2218981455 3527073.5725489054 0.7987749844128196 0.7147501874050586 0.7518678387829887 1.1675729787309996 0.8051044909368803 0.8914057180768891 0.9243716382754813 0.72278792853364 0.8529590211309467 1.0 21.75004023911851 -5.0826648485169095 24.999999943660114 0.8982968412627542 0.7508431111519356 0.275495344272087 0.11345681120493578 122.5260402723938 37053.43889496445 0.030953492973034614 0.05361304882223627 8.266756613296999e-06 5.0826648485169095 -0.14745373011081864 TSS(ph)PHKEESPK ddPTM_KYSE-520_SHP099_60min_R1 3 TSSPHKEESPK 11 1 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 T(0.035)S(0.105)S(0.86)PHKEESPK;T(0.06)S(0.379)S(0.561)PHKEESPK;T(0.004)S(0.153)S(0.842)PHKEES(0.001)PK 173.06 6.643999999999999e-06 5005700000.0 3811610.0 3768690.0 3050760.0 5344280.0 3854380.0 3824970.0 3880820.0 3946690.0 4586100.0 4278910.0 True False 3600172.3950438458 3587636.475480981 3247416.8709885897 5852198.764383624 4157697.777577715 3801096.943429423 4273131.158753294 3932999.85355437 3753379.846172937 4241002.186341601 0.8488966137858674 0.8459407276504541 0.765719216426506 1.379909395762864 0.9803573766049513 0.8962732807993075 1.0075757971818937 0.927375106341805 0.8850219078549214 1.0 22.015973796003717 TSS(ph)PIPAQHAPRPYASSLEK ddPTM_KYSE-520_SHP099_60min_R1 2 TSSPIPAQHAPRPYASSLEK 20 1 H0YKX0;Q96EP0-3;Q96EP0 H0YKX0 RNF31 E3 ubiquitin-protein ligase RNF31 1 T(0.016)S(0.104)S(0.879)PIPAQHAPRPYASSLEK;T(0.194)S(0.194)S(0.612)PIPAQHAPRPYASSLEK 222.72 3.3391999999999997e-19 1842120000.0 1430160.0 1358220.0 1227220.0 1403450.0 1279710.0 1155850.0 1208500.0 1071330.0 1571210.0 1134230.0 True False 1350826.1738467212 1292969.0724702168 1306328.5648214265 1536833.4660373703 1380415.8964461177 1148635.9114092137 1330666.9738234081 1067613.8062803014 1285917.8709808707 1124181.6046175861 1.2016085019521672 1.1501425278258732 1.1620262771207694 1.3670686833202152 1.2279296252278518 1.0217529860755425 1.1836761679409105 0.9496809073330039 1.143870230307053 1.0 20.10044368221202 -6.25291886259518 24.466526856468395 1.0643936214265446 1.222531363031271 0.483531819354893 0.08362271458572977 437.91990514495694 1257480.3300378127 0.027907584726824874 0.027466102922002692 5.585745411129043e-07 6.25291886259518 0.1581377416047265 TSS(ph)PLFNK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSPLFNK 8 0 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 T(0.024)S(0.035)S(0.942)PLFNK 74.376 0.023417 252050000.0 1835300.0 1694800.0 1474900.0 1267900.0 1437800.0 1702900.0 1415000.0 1573600.0 1998900.0 1467000.0 True False 1733492.2504201536 1613379.2640533368 1569974.4139234389 1388400.8347919655 1550946.6800370598 1692271.5694413197 1558042.0090691934 1568141.548881 1635950.148168396 1454003.521308729 1.192220118462891 1.109611662151379 1.079759705471914 0.9548813427510029 1.066673262689951 1.163870337754154 1.0715531195322145 1.0784991410952958 1.125134928625138 1.0 20.47159933250774 -4.349027724503806 2.3926945805415682 1.0702659618880035 1.2078087600272984 0.3240650383985344 0.05494872811994144 0.5823968606748594 4.662189968079548 0.015187193823789597 0.15249266492329133 4.4768472395365124e-05 4.349027724503806 0.13754279813929493 TSS(ph)S(ph)ETEEKKPEKPLILQSLGPK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSSETEEKKPEKPLILQSLGPK 23 3 Q9Y5K6 Q9Y5K6 CD2AP CD2-associated protein 2 T(0.209)S(0.424)S(0.574)S(0.652)ET(0.141)EEKKPEKPLILQSLGPK 74.382 0.030989999999999997 2951300000.0 1013700.0 916880.0 927770.0 1072900.0 968430.0 1082400.0 1088200.0 1335900.0 1341400.0 1109700.0 True False 957468.0402391497 872831.7085350613 987575.5386844852 1174868.093420853 1044639.9313870427 1075644.3401041075 1198205.8758085503 1331266.0747014051 1097835.57394221 1099868.9213335365 0.8705292254992233 0.7935779360660506 0.8979029405495874 1.0681891911232329 0.9497858436807803 0.9779750288788432 1.0894078854012759 1.2103861186361289 0.9981512820738119 1.0 20.06890016779214 -5.224621363772033 0.7396945282619952 1.0759228089698332 0.790342014195484 0.5510910945957201 0.07569476066039559 0.7630017221221077 0.7060278542026375 0.0391049121973111 0.14833228101326665 5.961816933332733e-06 5.224621363772033 -0.28558079477434917 TSS(ph)TCS(ph)NESLSVGGTSVTPR ddPTM_KYSE-520_SHP099_60min_R1 1 TSSTCSNESLSVGGTSVTPR 20 0 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 2 T(0.015)S(0.401)S(0.577)T(0.008)CS(0.998)NES(0.001)LSVGGTSVTPR 170.04 6.2641e-08 0.0 613610.0 595260.0 536510.0 510760.0 590250.0 598990.0 558630.0 609790.0 726880.0 573160.0 True False 579571.8300987912 566662.816096524 571094.2930463519 559302.4768344064 636699.3169368999 595251.4812259411 615101.7721034092 607674.7808160556 594896.9151536565 568082.2483117321 1.0202252082708176 0.9975013614323869 1.0053021278935774 0.9845448938011739 1.1207872078895071 1.0478262311398614 1.0827688665354587 1.0696950707789012 1.0472020854754998 1.0 19.11574029614064 -5.737192278127007 24.999870033971956 1.0652564510424265 1.0018231458139921 0.4837742177627825 0.029943604703509843 179.3342706288189 184900.8576945118 0.00827962272860753 0.010683810880264537 1.8315033689956028e-06 5.737192278127007 -0.06343330522843438 TSS(ph)TDEVLSLEEK ddPTM_KYSE-520_SHP099_60min_R1 5 TSSTDEVLSLEEK 13 0 K7ENH8;A0A0A0MRB7;P15923-2;K7EMM4 K7ENH8 TCF3 Transcription factor E2-alpha 1 T(0.004)S(0.168)S(0.803)T(0.025)DEVLSLEEK;TSS(0.854)T(0.146)DEVLSLEEK;TSS(0.999)T(0.001)DEVLSLEEK;TS(0.021)S(0.957)T(0.021)DEVLSLEEK;TSS(0.999)T(0.001)DEVLSLEEK 296.97 1.9562e-30 2349500000.0 5476080.0 6032690.0 4740590.0 4310140.0 4949070.0 6498360.0 5360930.0 6984310.0 8120210.0 7270320.0 True False 5172310.926105164 5742870.517147706 5046176.016612178 4719774.409709154 5338533.652643626 6457801.324795755 5902865.122034858 6960083.058760201 6645784.557836047 7205910.621023367 0.7177872718841195 0.7969666596186724 0.7002829041328757 0.6549865322974076 0.7408548250748993 0.8961811580003517 0.8191699054402851 0.9658852884539033 0.9222685247367428 1.0 22.78074932663897 -6.705058797976628 1.0097783054213942 0.9665983545779443 0.7178741644767046 0.7937640878296963 0.0515251782653282 0.25412244197717604 0.5175931655331597 0.038395980279320625 0.022955166020381886 1.9721557131145906e-07 6.705058797976628 -0.2487241901012397 TSS(ph)TLDSEGTFNSYR ddPTM_KYSE-520_SHP099_60min_R1 2 TSSTLDSEGTFNSYR 15 0 Q92609;Q92609-2;C9JNM0;C9JED7;F2Z3C3;C9K0P2;C9J397;C9JWX0;C9JW04;C9JDR8 Q92609 TBC1D5 TBC1 domain family member 5 1 T(0.001)S(0.026)S(0.972)T(0.001)LDSEGTFNSYR;TSS(1)TLDSEGTFNSYR 343.7 1.7786000000000002e-54 807410000.0 716000.0 711040.0 618230.0 591160.0 656540.0 684090.0 638960.0 726770.0 839390.0 678620.0 True False 676282.0526893863 676880.5711072008 658082.0950029745 647343.6686612642 708205.962798394 679820.3405596982 703552.3124486589 724249.0044993936 686977.9352999489 672607.9547583712 1.0054624657722566 1.0063523131396275 0.9784036753466363 0.9624383180151609 1.0529253449772402 1.0107230159118739 1.0460065294669376 1.0767773401662697 1.0213645712036516 1.0 19.35940631577914 -5.769545705425974 24.999215240895495 1.037844867239605 0.9887661631877073 0.47588772489728837 0.02374400986187261 153.12252526819796 472215.73151262576 0.0074518130351791 0.008594976969858814 1.7000210329388626e-06 5.769545705425974 -0.04907870405189774 TSS(ph)VLGMSVESAPAVEEEKGEELEQK ddPTM_KYSE-520_SHP099_60min_R1 2 TSSVLGMSVESAPAVEEEKGEELEQK 26 1 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 T(0.127)S(0.127)S(0.747)VLGMSVESAPAVEEEKGEELEQK;T(0.019)S(0.019)S(0.961)VLGMSVESAPAVEEEKGEELEQK 258.09 3.5813999999999995e-38 772810000.0 487420.0 416530.0 331160.0 362520.0 334810.0 474530.0 342900.0 435720.0 532930.0 479330.0 True False 460381.840952319 396519.2735757237 352507.10347473394 396973.7918043877 361157.6421916872 471568.2822520334 377563.6783815034 434208.5890178123 436163.34607203066 475083.50911309756 0.9690545601378078 0.8346306827529326 0.741989769615044 0.8355873950360269 0.7601982288669814 0.9926008232371052 0.7947311812324372 0.9139626627504036 0.9180772173849511 1.0 18.857821603867812 -7.886978779198705 0.6900613478695039 1.0002029439782858 0.8354739478935913 0.28005612214669795 0.07690965495755492 0.9193744273831321 1.02067174689488 0.07548206661979345 0.031189318331965293 1.2972426562150335e-08 7.886978779198705 -0.1647289960846945 TSS(ph)VPEYVYNLHLVENDFVGGR ddPTM_KYSE-520_SHP099_60min_R1 8 TSSVPEYVYNLHLVENDFVGGR 22 0 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 1 T(0.012)S(0.012)S(0.974)VPEY(0.002)VYNLHLVENDFVGGR;T(0.1)S(0.1)S(0.8)VPEYVYNLHLVENDFVGGR;T(0.113)S(0.113)S(0.775)VPEYVYNLHLVENDFVGGR;T(0.098)S(0.098)S(0.804)VPEYVYNLHLVENDFVGGR;T(0.022)S(0.022)S(0.957)VPEYVYNLHLVENDFVGGR;T(0.002)S(0.013)S(0.985)VPEYVYNLHLVENDFVGGR;T(0.126)S(0.126)S(0.748)VPEYVYNLHLVENDFVGGR;T(0.006)S(0.12)S(0.874)VPEYVYNLHLVENDFVGGR 361.48 7.404899999999998e-79 9381060000.0 520878.0 660164.0 522773.0 557239.0 578979.0 503932.0 497826.0 569583.0 748770.0 587470.0 True False 491983.85899544985 628448.7305136335 556471.784046374 610198.8270199858 624541.3533601172 500786.7734639154 548151.1103935556 567607.2495146713 612812.2429556507 582265.4728447433 0.8449476775461039 1.0793164970666302 0.9557011535093255 1.0479735712969034 1.0726058516037864 0.8600660640536494 0.941410981687585 0.9748255323152563 1.0524619293698916 1.0 19.15131754687172 -5.5407521918422455 0.002670661764009013 1.9632259087748134 3.388669562135523e-05 0.01669982300630446 0.07892809185946739 604244.8204605913 413.911620963257 150369.19581551786 153898.56891422576 2.879040724964295e-06 5.5407521918422455 -1.963192022079192 TSS(ph)VPEYVYNLHLVENDFVGGRS(ph)PVPK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSVPEYVYNLHLVENDFVGGRSPVPK 27 1 Q99959-2;Q99959 Q99959-2 PKP2 Plakophilin-2 2 T(0.028)S(0.135)S(0.838)VPEYVYNLHLVENDFVGGRS(1)PVPK 235.17 1.2244e-30 234800000.0 112390.0 123590.0 93079.0 123150.0 109040.0 110840.0 75807.0 95551.0 172240.0 103540.0 True False 106155.50265608945 117652.55088762801 99079.02127166555 134854.13897360247 117620.82764726723 110148.20644598964 83470.31136502359 95219.55588277114 140965.5578170615 102622.71615290098 1.0344249951241289 1.146457190943315 0.9654687089361818 1.3140768830624092 1.1461480660092846 1.0733316226192666 0.8133707086904465 0.927860413876596 1.3736291836890406 1.0 16.646990589920552 -6.5266302229241 24.998841550916023 1.0113674209830092 1.1232605154484416 0.06727866960037687 0.15741719634182927 284.90254796310336 1898476.3403676478 0.06050488384552838 0.04708764221678644 2.974197313990589e-07 6.5266302229241 0.11189309446543239 TSS(ph)VVTLEVAK ddPTM_KYSE-520_SHP099_60min_R1 8 TSSVVTLEVAK 11 0 A8MQ02;J3KN01;P55196;P55196-5;P55196-3;P55196-1;Q5TIG5;P55196-2;P55196-6 A8MQ02 MLLT4 Afadin 1 TSS(1)VVTLEVAK;TSS(1)VVTLEVAK;TSS(1)VVTLEVAK;TSS(1)VVTLEVAK;TS(0.001)S(0.999)VVTLEVAK;TSS(1)VVTLEVAK;T(0.017)S(0.106)S(0.877)VVTLEVAK;TS(0.001)S(0.999)VVTLEVAK 272.1 1.1020000000000001e-20 24210500000.0 41370700.0 44214400.0 34024300.0 29093000.0 30604000.0 40998500.0 30748700.0 42704300.0 44711300.0 46659700.0 True False 39075784.80055414 42090273.85683254 36217560.818804815 31857989.972870585 33012360.68705953 40742613.15387863 33857078.67439291 42556168.75055859 36592855.00015091 46246331.35869733 0.844948856536819 0.9101321687631947 0.7831445166513419 0.6888760478268554 0.7138373946034327 0.8809912474541909 0.7321030161676936 0.9202063709763921 0.7912596291439464 1.0 25.46283558788286 -10.293206864633246 5.219735843174397 1.0000395448143602 0.8066408384357746 0.3599685410288396 0.07708997599277424 3.704266728977018e-05 5.0158085012329516e-06 0.07793739820599332 0.018898734698709282 5.090883226047243e-11 10.293206864633246 -0.19339870637858558 TSSAFVGKT(ph)PEAS(ph)PEPK ddPTM_KYSE-520_SHP099_60min_R1 4 TSSAFVGKTPEASPEPK 17 1 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 2 T(0.001)S(0.001)S(0.001)AFVGKT(0.998)PEAS(1)PEPK;TSSAFVGKT(1)PEAS(1)PEPK;TSSAFVGKT(1)PEAS(1)PEPK;T(0.002)S(0.003)S(0.004)AFVGKT(0.991)PEAS(1)PEPK 181.41 6.2095e-09 3051290000.0 5070890.0 4664440.0 4364690.0 4317920.0 4368280.0 4378160.0 4307320.0 4453080.0 5365500.0 4252290.0 True False 4789597.623131395 4440353.300932815 4646044.90115092 4728293.818570009 4712038.783886696 4350834.279444004 4742745.940992166 4437633.3048366895 4391260.453248052 4214618.018831556 1.1364250809280327 1.053560080911874 1.102364408919547 1.1218795623810442 1.1180227396249407 1.0323199540275807 1.125308609179018 1.0529147089982218 1.041911849099309 1.0 22.006970451426373 -7.830254072939489 0.8862591535939383 0.9991670106716234 1.0992212267197583 0.5119808376222721 0.03160644713450967 0.4616711486953448 0.8021278219344294 0.02932603898478825 0.010632792481101844 1.4782433264956244e-08 7.830254072939489 0.10005421604813491 TSSAFVGKT(ph)PEASPEPK ddPTM_KYSE-520_SHP099_60min_R1 4 TSSAFVGKTPEASPEPK 17 1 A0A087WW66;Q99460-2;Q99460 A0A087WW66 PSMD1 26S proteasome non-ATPase regulatory subunit 1 1 TSSAFVGKT(1)PEASPEPK;TSSAFVGKT(1)PEASPEPK;TSSAFVGKT(1)PEASPEPK;TSSAFVGKT(0.999)PEAS(0.001)PEPK 204.5 1.3549999999999998e-12 8939500000.0 13646300.0 15451600.0 11403100.0 10549200.0 10766100.0 14702700.0 11067000.0 14200500.0 15893600.0 14593300.0 True False 12889312.535775393 14709281.942675551 12138162.071605083 11551792.796267357 11613330.819270397 14610934.995610353 12185760.36351149 14151241.779921632 13007722.885051392 14464014.715415588 0.8911296613960235 1.0169570642788797 0.8391972982901049 0.7986574283525572 0.8029119886675058 1.0101576417810318 0.8424881060528817 0.9783757869687034 0.8993162092947752 1.0 23.785964714848728 -6.260106358985047 24.999975226436383 0.9382423179955169 0.8722984535430992 0.2087068033880628 0.07341289635849939 247.59800673930852 4643576.367801904 0.026197413706481442 0.024860775158611764 5.494063074388585e-07 6.260106358985047 -0.06594386445241773 TSSASRPAS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 1 TSSASRPASLPR 12 1 Q69YQ0-2;Q69YQ0;A0A494C1J1 Q69YQ0-2 SPECC1L Cytospin-A 1 TSS(0.001)AS(0.194)RPAS(0.805)LPR 166.71 4.3169999999999995e-06 2685300000.0 2830900.0 2557800.0 2739300.0 2518800.0 2707000.0 2848000.0 2272900.0 2531600.0 2799500.0 2442700.0 True False 2673864.3337407587 2434919.448663925 2915879.6610349654 2758185.994695167 2920025.4992768993 2830224.575588042 2502666.9133663415 2522818.470479883 2291181.369652021 2421059.5783918435 1.104419055856873 1.0057247125993023 1.2043816216087502 1.139247468055807 1.2060940281430361 1.169002448699747 1.0337072807719605 1.0420307261317507 0.9463548068378838 1.0 21.207207151508136 -6.8937253474145255 4.143871439790579 1.0022584826189629 1.1380552763244844 0.56086772872187 0.05796049626740983 0.18726767042878914 5.825853979905351 0.027517112719615648 0.018027579193995242 1.277246297995437e-07 6.8937253474145255 0.13579679370552156 TSSAVST(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSAVSTPSK 10 0 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 TSSAVS(0.048)T(0.95)PS(0.002)K 140.45 0.0063576 0.0 1080200.0 1346500.0 882600.0 772410.0 772440.0 1145800.0 895990.0 1103900.0 1177000.0 1259500.0 True False 1020279.1526746851 1281812.1188622941 939493.8082099298 845819.6141664657 833226.633417601 1138648.637187071 986565.4132197226 1100070.828552196 963286.4697554663 1248341.8098761714 0.8173075231501629 1.0268118144576466 0.7525934009236801 0.6775545026809334 0.6674667361339539 0.9121288962515952 0.79030070563573 0.8812256545835927 0.7716528134638213 1.0 20.25158158356859 -9.095043801905941 10.198108014657043 0.9999999997013167 0.8117414077272599 0.23378996709727917 0.10275142921628577 0.0 0.0 0.1053528698386807 0.02555182413569586 8.034450845435095e-10 9.095043801905941 -0.1882585919740568 TSSAVWNS(ph)PPLQGAR ddPTM_KYSE-520_SHP099_60min_R1 4 TSSAVWNSPPLQGAR 15 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 TSSAVWNS(1)PPLQGAR;TSSAVWNS(1)PPLQGAR;TSSAVWNS(1)PPLQGAR;TSSAVWNS(1)PPLQGAR 124.42 9.2321e-05 2496000000.0 2319210.0 2448260.0 2114880.0 1917780.0 2117830.0 2207090.0 1884100.0 1924930.0 2491850.0 2102860.0 True False 2190558.798069488 2330641.9146868214 2251208.548727641 2100045.2345984206 2284491.172195637 2193314.732631533 2074563.2150440067 1918252.867112041 2039392.8544266408 2084230.2964003254 1.0510157163787526 1.1182266751961496 1.0801150681936174 1.0075879034219055 1.0960838522216967 1.0523379956714032 0.9953617978910417 0.9203651201237483 0.9784872899836821 1.0 20.99108326590327 -6.818142878711823 3.003892274103231 0.9614230240635325 1.0704233199169686 0.6642128361779138 0.03322683635254544 0.14696221069682255 2.6903137037438665 0.015172505265878346 0.009986750472187717 1.5200473664836726e-07 6.818142878711823 0.10900029585343607 TSSESIISVPASSTSGS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 TSSESIISVPASSTSGSPSR 20 0 D6RAL0;F5GYR0;Q6H8Q1-4;Q6H8Q1-6;Q6H8Q1-8;Q6H8Q1-3;Q6H8Q1-7;Q6H8Q1-2;Q6H8Q1-5;Q6H8Q1;Q6H8Q1-9 D6RAL0 ABLIM2 Actin-binding LIM protein 2 1 TSSESIISVPASSTS(0.007)GS(0.989)PS(0.004)R 278.46 1.8069e-33 0.0 202460.0 238470.0 152530.0 134250.0 143520.0 223970.0 115810.0 162250.0 250640.0 173320.0 True False 191229.14020599623 227013.54324923246 162362.32785662904 147009.07963626587 154814.20748290353 222572.1201525466 127517.20499668071 161687.19261943453 205130.0941202293 171784.51964091955 1.1131919255921412 1.3215017495392363 0.9451511009025395 0.855776061449299 0.9012116330767813 1.295647131754294 0.7423090582505885 0.9412209723984942 1.1941128021838747 1.0 17.390240508331495 -4.772202783916833 24.99247093077264 0.9772303729678383 1.2173468445009614 0.2578151817537798 0.15769781469569072 240.4386014034548 558298.3476351382 0.041007760391669666 0.08672808386850116 1.6896518029988797e-05 4.772202783916833 0.2401164715331231 TSSGDPPS(ph)PLVK ddPTM_KYSE-520_SHP099_60min_R1 6 TSSGDPPSPLVK 12 0 Q99618;F5GX58;F8WDL1 Q99618 CDCA3 Cell division cycle-associated protein 3 1 T(0.005)S(0.005)S(0.005)GDPPS(0.986)PLVK;TSSGDPPS(0.999)PLVK;TSSGDPPS(1)PLVK;TSSGDPPS(1)PLVK;TSSGDPPS(1)PLVK;T(0.001)S(0.001)S(0.001)GDPPS(0.998)PLVK 182.89 1.6369e-07 6157450000.0 12834070.0 15200780.0 12347560.0 11713720.0 10580650.0 15775560.0 13002030.0 16704890.0 21941820.0 16569920.0 True False 12122138.553015737 14470511.711964052 13143503.474394532 12826988.426941652 11413286.959336566 15677098.878393153 14316402.079984413 16646944.635540655 17957738.5962701 16423123.40000269 0.7381140759749605 0.8811059479685626 0.8003047382809276 0.781032213819909 0.6949522743849502 0.9545747478455033 0.8717222498603444 1.0136284207386477 1.0934423470426555 1.0 23.96922519359121 -6.942097176491736 1.2811485202068562 1.0489090680253141 0.7913509440893376 0.716442805577063 0.06605633746363852 0.2510129219448926 0.7953451290932928 0.047212347556193635 0.023120416999860376 1.1426226362090281e-07 6.942097176491736 -0.25755812393597655 TSSKDDKGS(ph)TSSTSGSSGSSTK ddPTM_KYSE-520_SHP099_60min_R1 4 TSSKDDKGSTSSTSGSSGSSTK 22 2 Q9NWH9;H7BXE3 Q9NWH9 SLTM SAFB-like transcription modulator 1 T(0.001)S(0.001)S(0.001)KDDKGS(0.95)T(0.024)S(0.024)S(0.001)TSGSSGSSTK;TSSKDDKGS(0.945)T(0.054)SSTSGSSGSSTK;TSSKDDKGS(0.875)T(0.042)S(0.042)S(0.028)T(0.004)S(0.004)GS(0.004)S(0.001)GSSTK;TSSKDDKGS(0.791)T(0.017)S(0.115)S(0.07)T(0.003)S(0.003)GS(0.001)SGSSTK 227.96 3.1273e-20 2602440000.0 1674130.0 1552750.0 1228040.0 1320910.0 1349400.0 1433180.0 1268440.0 1394530.0 1937730.0 1664490.0 True False 1581262.6716045856 1478153.5592747345 1307201.4233334723 1446448.8892539288 1455590.102964257 1424234.992008874 1396666.2939814345 1389692.7009157476 1585887.07819818 1649743.9135536232 0.958489774451402 0.8959897030871443 0.7923662652088234 0.876771768860909 0.8823127583655391 0.8633067110040171 0.8465958155729467 0.8423687394744112 0.9612928801671451 1.0 20.65381066451066 -7.897322301451282 4.464448728803093 0.9984121283521735 0.8679474052197317 0.5541685831458585 0.04034128269441124 0.1471347523748153 4.704159758301962 0.03997457977131948 0.010496658303610793 1.2667114567880653e-08 7.897322301451282 -0.13046472313244184 TSSKES(ph)S(ph)PIPS(ph)PTSDRK ddPTM_KYSE-520_SHP099_60min_R1 2 TSSKESSPIPSPTSDRK 17 2 A0A087WUZ3;Q01082 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 3 T(0.348)S(0.371)S(0.397)KES(0.418)S(0.467)PIPS(0.922)PT(0.041)S(0.037)DRK;T(0.353)S(0.381)S(0.401)KES(0.432)S(0.432)PIPS(0.94)PT(0.029)S(0.031)DRK 62.19 0.015856 854840000.0 1384340.0 1294700.0 1167590.0 1244550.0 1096700.0 1078080.0 1119020.0 1217680.0 1491230.0 1075530.0 True False 1307547.9005866265 1232500.6686156804 1242854.7196100515 1362831.657812397 1183004.0506305767 1071351.3028265287 1232141.4621827637 1213456.1522886471 1220460.2228491458 1066001.6409496772 1.2265908891301154 1.1561902170410103 1.1659031955174288 1.278451744781819 1.1097581890930905 1.0050184368122412 1.1558532509247137 1.1383248446105636 1.144895257161016 1.0 20.023778228235653 -5.906982961508058 9.306491851017748 1.0967842653862845 1.200043919365844 0.4703302757124278 0.059383124969632196 0.3025249040332789 27.50047269095389 0.018644801914320813 0.02115834588551122 1.238845188666909e-06 5.906982961508058 0.1032596539795596 TSSLDT(ph)ITGPYLTGQWPR ddPTM_KYSE-520_SHP099_60min_R1 1 TSSLDTITGPYLTGQWPR 18 0 Q86VQ1;H7C2L5;H7C0Q2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 T(0.229)S(0.229)S(0.229)LDT(0.312)ITGPYLTGQWPR 109.48 0.00014574 82255000.0 76486.0 75622.0 57982.0 60678.0 67783.0 60507.0 59763.0 71748.0 64873.0 47385.0 True False 72243.16910893908 71989.00560906384 61719.612494480156 66444.81887649414 73117.1364674865 60129.35336906796 65804.42727067292 71499.12293410914 53093.69851524753 46965.20576497213 1.5382274586523776 1.5328157182855378 1.3141561181131296 1.4147669065691695 1.5568362850018462 1.2802957506451296 1.4011314588927357 1.5223849607284174 1.1304900649417826 1.0 15.519304709527654 -7.899054669746987 4.381855444663812 1.0047397481684353 1.4387599643668476 0.7382123755953012 0.09171766535470244 0.09969277663985462 3.1212521088501863 0.08962136068067234 0.02355231230919124 1.2616687035365954e-08 7.899054669746987 0.43402021619841236 TSSPHKEES(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 2 TSSPHKEESPKK 12 2 G3XAH6;P51003;H0YJL4 G3XAH6 PAPOLA Poly(A) polymerase alpha 1 TSSPHKEES(1)PKK;TSSPHKEES(1)PKK 113.47 0.00010309999999999999 2107410000.0 775750.0 1119550.0 712790.0 3242200.0 1038470.0 1020780.0 851200.0 788830.0 1045620.0 793950.0 True False 732717.6010807134 1065765.1375211892 758737.5839043234 3550337.713197025 1120191.6809139545 1014408.9333808848 937247.6029114473 786093.7328443057 855761.7659351827 786916.2206837528 0.9311252987567773 1.3543565496656609 0.9641910586682977 4.511709912539521 1.4235208926569314 1.289093942553965 1.1910386115780804 0.9989547961805484 1.087487769907208 1.0 19.58585052130302 -5.9882832473357945 24.999917274452383 1.1445735968228534 1.9711199828294101 0.14403332011325087 0.9486252897908105 477.39639919194474 1018609.5483175192 0.308617054575359 0.3496797340977555 1.027346043367384e-06 5.9882832473357945 0.8265463860065567 TSSSKAS(ph)T(ph)LQLGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 TSSSKASTLQLGSPR 15 1 Q7L8L6 Q7L8L6 FASTKD5 FAST kinase domain-containing protein 5 3 T(0.27)S(0.299)S(0.325)S(0.344)KAS(0.384)T(0.383)LQLGS(0.995)PR;T(0.286)S(0.309)S(0.328)S(0.342)KAS(0.368)T(0.368)LQLGS(0.999)PR;T(0.263)S(0.294)S(0.322)S(0.344)KAS(0.389)T(0.389)LQLGS(1)PR 58.023999999999994 0.030843000000000002 10175500000.0 7258200.0 6592500.0 6455300.0 6290600.0 6774800.0 5977500.0 5841100.0 6529100.0 8171900.0 5704500.0 True False 6855573.17713702 6275786.404455766 6871418.966845179 6888456.732662152 7307938.216660924 5940192.205258963 6431575.391642456 6506452.076003401 6688088.956834914 5653962.568033845 1.2125253916424552 1.1099801827372477 1.2153279906192769 1.2183414109615514 1.2925338872914127 1.0506246077473862 1.1375341301346862 1.150777352646324 1.1829029422033623 1.0 22.4308309011861 -6.270327447693099 24.990134166140322 1.1158642904872293 1.2049875666855834 0.3975351206452086 0.06395019366797614 817.6409654470522 2298914.552875922 0.022691633610114118 0.020287467296512388 5.366270397971525e-07 6.270327447693099 0.08912327619835403 TSSSS(ph)PLS(ph)SPSKSPILSSSASTSTLSSAKPFMSLVK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSSSPLSSPSKSPILSSSASTSTLSSAKPFMSLVK 36 2 A0A087WVA8;Q8IWB9;Q8IWB9-2 A0A087WVA8 TEX2 Testis-expressed sequence 2 protein 2 T(0.02)S(0.021)S(0.024)S(0.071)S(0.703)PLS(0.247)S(0.235)PS(0.202)KS(0.182)PILS(0.158)S(0.049)S(0.019)AS(0.018)T(0.017)S(0.016)T(0.016)LS(0.002)S(0.001)AKPFMSLVK 54.011 0.036463999999999996 239060000.0 266130.0 337880.0 232210.0 338130.0 285240.0 276240.0 218080.0 224200.0 369050.0 167550.0 True False 251367.23838299798 321647.7376317803 247178.62814913664 370265.77353750874 307686.7652064066 274515.88369397464 240125.65465569578 223422.30252867332 302039.8229934193 166065.63735192732 1.5136619615670337 1.9368711237361071 1.4884393429648193 2.229635097553862 1.8528021215753077 1.6530565147094152 1.4459683441121538 1.3453855119659428 1.8187978428874763 1.0 17.341394053151458 -6.594704276596252 2.957543811670658 1.4290603324922553 1.8153633169791321 0.32729226148098434 0.270148501700989 0.32834416673386385 5.823430369260746 0.10910650288975814 0.0825042725371993 2.5427035149885763e-07 6.594704276596252 0.38630298448687683 TSSSSDDS(ph)KRSPLGK ddPTM_KYSE-520_SHP099_60min_R1 1 TSSSSDDSKRSPLGK 15 2 Q9C0B5;Q9C0B5-2 Q9C0B5 ZDHHC5 Palmitoyltransferase ZDHHC5 1 T(0.005)S(0.005)S(0.037)S(0.204)S(0.161)DDS(0.559)KRS(0.03)PLGK 88.28299999999999 0.0018977 1100200000.0 549350.0 703380.0 474020.0 760220.0 808010.0 667730.0 665000.0 724840.0 1096000.0 526490.0 True False 518876.460397925 669588.5690050948 504576.0876588158 832471.0802315216 871595.7900519861 663562.4493881332 732224.6897745676 722325.699218928 896994.0279116322 521825.7082030219 0.9943482129018651 1.2831651612392085 0.9669437126744722 1.5953048444053275 1.6702814298924544 1.271617014947771 1.4031978077432852 1.3842278903934326 1.7189533091433031 1.0 18.99320849598463 -5.260637871128863 24.9986155569336 1.4525029608340905 1.1016536378347717 0.36713338897465686 0.2111858124964276 75.6513720627295 2359492.440084626 0.05615485190129525 0.09041847864900393 5.487343267504574e-06 5.260637871128863 -0.3508493229993188 TSSTCS(ph)NESLSVGGTSVTPR ddPTM_KYSE-520_SHP099_60min_R1 1 TSSTCSNESLSVGGTSVTPR 20 0 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 1 TSST(0.003)CS(0.97)NES(0.026)LSVGGTSVTPR 300.74 2.3828999999999995e-44 278460000.0 229350.0 230420.0 138470.0 124460.0 125120.0 165800.0 110570.0 156630.0 189880.0 169050.0 True False 216627.4983021101 219350.27733252879 147395.99775983355 136288.64097973652 134966.2321645825 164765.1806996128 121747.49465920907 156086.68708771677 155402.5784852742 167552.3485189097 1.2928944310062107 1.3091447495155417 0.8797011743658052 0.8134093146677391 0.8055168033013301 0.983365390912546 0.7266236238131203 0.9315696763874429 0.9274867219646025 1.0 17.354252382840365 -4.762617722472921 24.382521036995485 0.8736964804243398 1.3010197775488976 0.8122576932194745 0.08018982235084775 7.705687814401716 159471.24601238224 0.02004794807802024 0.04587214492534893 1.7273576890829898e-05 4.762617722472921 0.42732329712455785 TSSVSNPQDSVGS(ph)PCSR ddPTM_KYSE-520_SHP099_60min_R1 10 TSSVSNPQDSVGSPCSR 17 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 TSSVSNPQDSVGS(0.999)PCSR;TSSVSNPQDSVGS(1)PCSR;TSSVSNPQDSVGS(0.999)PCS(0.001)R;TSSVSNPQDSVGS(0.996)PCS(0.004)R;TSSVSNPQDSVGS(1)PCSR;TSSVSNPQDSVGS(0.997)PCS(0.003)R;TSSVSNPQDSVGS(0.998)PCS(0.002)R;TSSVSNPQDSVGS(1)PCSR;TSSVSNPQDSVGS(1)PCSR;TSSVSNPQDS(0.008)VGS(0.937)PCS(0.055)R 415.55 1.7275999999999993e-101 53169880000.0 8830840.0 9351820.0 7621430.0 7339940.0 7786700.0 11089720.0 10926150.0 13620310.0 15990330.0 13946670.0 True False 8340975.701356897 8902544.529831998 8112719.572519162 8037525.690766575 8399468.989737492 11020504.943957224 12030671.870947981 13573064.323614264 13086889.155416235 13823113.354145057 0.6034078928286974 0.6440332435791278 0.5868952503443406 0.5814555292174037 0.6076394495613965 0.7972520127423081 0.8703301175881925 0.9819108022827714 0.9467396251577396 1.0 23.720579252059846 -6.596068643879105 1.5187378434365582 0.972489346334004 0.5994694805861648 0.9716675697286768 0.0280782936067086 0.06089697117715321 0.2861025241278059 0.01521644173607017 0.010522490832258516 2.534727963857043e-07 6.596068643879105 -0.3730198657478392 TST(ph)PSPQPSKR ddPTM_KYSE-520_SHP099_60min_R1 3 TSTPSPQPSKR 11 1 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 1 T(0.001)S(0.003)T(0.762)PS(0.233)PQPS(0.002)KR;T(0.004)S(0.011)T(0.879)PS(0.106)PQPSKR;TS(0.03)T(0.867)PS(0.103)PQPSKR 144.92 9.0695e-05 2634740000.0 2698890.0 2504940.0 2311850.0 2004700.0 2138770.0 2265120.0 2143320.0 2230770.0 2839900.0 2269360.0 True False 2549177.1915961704 2384598.922408404 2460875.550090787 2195226.085264967 2307079.031063333 2250982.5458763978 2359987.7023874116 2223031.9795356328 2324245.7480531433 2249255.2359353625 1.1333427842554666 1.0601726670725113 1.094084615553833 0.9759790930761455 1.0257079740014141 1.0007679475025506 1.049230725212028 0.9883413602952781 1.033340152295609 1.0 21.101015950637752 -5.245613344856934 24.804049997638167 1.0118395741060697 1.0922972994615168 0.6894428254232918 0.026217401600408263 416.27950276964367 652430.786975992 0.00667618792210319 0.011515947033167469 5.680501189827669e-06 5.245613344856934 0.08045772535544704 TST(ph)SPPPEK ddPTM_KYSE-520_SHP099_60min_R1 1 TSTSPPPEK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TS(0.002)T(0.499)S(0.499)PPPEK 115.57 0.004 9458800000.0 14923000.0 12811000.0 10118000.0 9830200.0 9566500.0 14077000.0 12200000.0 13568000.0 13242000.0 13172000.0 True False 14095191.441737037 12195540.330296956 10770222.469372386 10764459.2524426 10319329.124060733 13989140.221401978 13433295.060525907 13520935.774795001 10837586.603654966 13055306.327660933 1.0796522952412726 0.9341443260092375 0.8249689589092961 0.8245275125896816 0.7904317880459574 1.071529067974643 1.0289528811793647 1.035665915103617 0.830128863440977 1.0 23.6381329734297 -6.268224961543815 24.997859500863942 0.9977155581154852 0.8858230795478778 0.21988995148863333 0.09613508264664451 856.3721634831059 3154837.9734829515 0.03533761992307383 0.03186137920408252 5.392312321041517e-07 6.268224961543815 -0.11189247856760742 TSTDRHS(ph)LSLDDIR ddPTM_KYSE-520_SHP099_60min_R1 2 TSTDRHSLSLDDIR 14 1 Q96NE9-3;Q96NE9-2;Q96NE9 Q96NE9-3 FRMD6 FERM domain-containing protein 6 1 TSTDRHS(1)LSLDDIR;T(0.163)S(0.163)T(0.163)DRHS(0.51)LS(0.001)LDDIR 164.02 2.3435e-08 1218280000.0 956870.0 1396390.0 1527650.0 3334700.0 1338970.0 1150850.0 1114800.0 1095860.0 1510230.0 1336010.0 True False 903790.5136269466 1329305.3283758778 1626124.7633264216 3651628.885385889 1444339.3213028386 1143667.118263868 1227494.8633995326 1092058.7174356475 1236010.3018001667 1324173.9908000508 0.6825315403460588 1.003875123368589 1.2280295298232944 2.757665465985793 1.0907473876829323 0.8636834178965238 0.9269891056068049 0.824709384886678 0.9334198605225461 1.0 20.336661267883564 -5.988528734604139 24.999651115245822 0.9084739114322105 1.4435387237137387 0.1827206845958853 0.5063767514346212 399.6437793656022 870949.2511920511 0.16842595784516953 0.1908284691470232 1.026765494640741e-06 5.988528734604139 0.5350648122815282 TSTLPPLPLPPLLPGDDDMDS(ph)PKETLPSKPVK ddPTM_KYSE-520_SHP099_60min_R1 1 TSTLPPLPLPPLLPGDDDMDSPKETLPSKPVK 32 2 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 TSTLPPLPLPPLLPGDDDMDS(0.76)PKET(0.206)LPS(0.034)KPVK 135.82 1.5357e-06 710720000.0 111730.0 144110.0 100460.0 93897.0 127670.0 144400.0 119710.0 152480.0 175410.0 140820.0 True False 105532.11417176694 137186.7392864799 106935.81234168324 102820.94264883743 137716.9026570673 143498.7460375395 131811.45505701296 151951.0824690994 143559.96572625855 139572.444356302 0.7561099517778985 0.9829070481582177 0.7661670814383416 0.7366851180620944 0.9867055298215035 1.0281309229722624 0.9443945448180537 1.0886896992446238 1.028569546004204 1.0 17.09065461430395 -5.870714765801162 6.2808009700076814 1.0173735425622956 0.8203395324062757 0.6556430076692037 0.07188617492813094 0.13981211545117023 7.241618413745318 0.022784125908728293 0.02597163893619511 1.3467445731902074e-06 5.870714765801162 -0.19703401015601996 TSTLPPLPLPPLLPGDDDMDS(ph)PKETLPSKPVKK ddPTM_KYSE-520_SHP099_60min_R1 2 TSTLPPLPLPPLLPGDDDMDSPKETLPSKPVKK 33 3 Q9NYV4;J3QSD7;Q9NYV4-3;Q9NYV4-2 Q9NYV4;Q9NYV4-2 CDK12 Cyclin-dependent kinase 12 1 TSTLPPLPLPPLLPGDDDMDS(0.813)PKET(0.156)LPS(0.031)KPVKK;TSTLPPLPLPPLLPGDDDMDS(0.967)PKET(0.031)LPS(0.001)KPVKK 148.1 6.4756e-07 2735300000.0 2007540.0 2167740.0 2250960.0 1818900.0 1961030.0 2051640.0 1590700.0 1996940.0 2902400.0 1756700.0 True False 1896177.7542682278 2063598.5165559214 2396060.483263341 1991767.7091277724 2115351.904265597 2038834.9537427814 1751503.4797359505 1990013.0812292984 2375397.323549926 1741137.0046919188 1.0890456920727742 1.1852016877448766 1.3761470101471456 1.143946572705346 1.214925590901385 1.1709790488908356 1.0059538537266721 1.1429388243812648 1.364279385912101 1.0 20.731598297995518 -6.52439777952637 24.98823512752952 1.1328134348967804 1.2059499879960522 0.08110074769057518 0.11593139759721788 147.16802310853365 2420814.274748104 0.044588306931727634 0.03480955265294083 2.9895252127081496e-07 6.52439777952637 0.0731365530992718 TSTPS(ph)PQPSKR ddPTM_KYSE-520_SHP099_60min_R1 6 TSTPSPQPSKR 11 1 Q8IY18 Q8IY18 SMC5 Structural maintenance of chromosomes protein 5 1 T(0.001)S(0.006)T(0.286)PS(0.707)PQPSKR;T(0.011)S(0.016)T(0.402)PS(0.569)PQPS(0.002)KR;T(0.004)S(0.009)T(0.08)PS(0.904)PQPS(0.003)KR;TS(0.013)T(0.405)PS(0.582)PQPSKR;T(0.011)S(0.041)T(0.185)PS(0.763)PQPSKR;T(0.004)S(0.025)T(0.16)PS(0.811)PQPSKR 104.94 0.00099502 7524110000.0 7571740.0 6452900.0 6007780.0 5544100.0 6333920.0 6536400.0 5383640.0 5826260.0 7627040.0 6406000.0 True False 7151720.488310527 6142892.997999627 6395051.111587874 6071009.597105549 6832363.468924981 6495603.903045534 5927870.870463098 5806050.0639193095 6242161.798032058 6349247.823792591 1.126388619059855 0.9674993272400412 1.0072139707043162 0.956177765554465 1.0760902170682338 1.0230509319079502 0.9336335633725836 0.9144469116738912 0.9831340611152004 1.0 22.598154259609036 -6.753572488620134 24.731298421655872 0.9506742085004725 1.0216474571557332 0.2911304451925033 0.051432285159569706 192.03510077506715 603706.2947366878 0.019583642781292224 0.014883218911668336 1.763711356699665e-07 6.753572488620134 0.07097324865526078 TSTS(ph)LGK ddPTM_KYSE-520_SHP099_60min_R1 12 TSTSLGK 7 0 Q9BW04;Q9BW04-2 Q9BW04 SARG Specifically androgen-regulated gene protein 1 TST(0.034)S(0.966)LGK;T(0.001)S(0.006)T(0.191)S(0.801)LGK;TST(0.006)S(0.994)LGK;TS(0.001)T(0.137)S(0.862)LGK;TST(0.003)S(0.997)LGK;TST(0.048)S(0.951)LGK;TST(0.016)S(0.984)LGK;TST(0.01)S(0.99)LGK;TST(0.059)S(0.94)LGK;TST(0.012)S(0.988)LGK;TS(0.003)T(0.049)S(0.947)LGK;TST(0.017)S(0.982)LGK 132.13 0.0019584 108460800000.0 251188700.0 198241400.0 202695900.0 243658200.0 256278100.0 270206600.0 326206900.0 188216500.0 269761000.0 268187100.0 True False 237254762.07874098 188717585.57759205 215762002.0389068 266815402.06949094 276445728.447076 268520140.3813511 359183076.92454726 187563620.8915612 220779202.5214141 265811170.94040623 0.8925688158227651 0.7099686025607319 0.8117115668072497 1.0037779869278325 1.0400079404828853 1.010191330301736 1.3512715649000118 0.7056273076409275 0.8305866218501099 1.0 27.985826495472473 -5.2400077593715695 5.873019820180703 0.9974180160553442 0.7934562899425321 0.22078472745216648 0.160372730092853 0.26987403540834604 33.878340107876305 0.04640148106569089 0.07825187211972426 5.754296562661594e-06 5.2400077593715695 -0.20396172611281205 TSTS(ph)PPPEK ddPTM_KYSE-520_SHP099_60min_R1 5 TSTSPPPEK 9 0 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 TST(0.025)S(0.975)PPPEK;TST(0.002)S(0.998)PPPEK;TST(0.33)S(0.669)PPPEK;TST(0.001)S(0.999)PPPEK;T(0.002)S(0.009)T(0.198)S(0.791)PPPEK 164.33 0.00011970000000000001 24368300000.0 50125300.0 45735600.0 33105800.0 33265100.0 35239000.0 45990300.0 40981800.0 47345100.0 45789200.0 45291000.0 True False 47344749.68669179 43538393.12546478 35239852.839152895 36426605.10248304 38012108.81751703 45703257.47846442 45124640.28782463 47180870.89852942 37475035.531798646 44889756.97586483 1.0546893740624816 0.9698959419377875 0.7850310452359934 0.8114680844021491 0.8467880286800038 1.0181221854918254 1.0052324478407422 1.0510386795788718 0.8348237561621744 1.0 25.419882950024725 -6.264537169840562 24.939515415477647 0.9864951467652906 0.8872229161347143 0.19060102649663746 0.09022229026035264 449.00953552762866 3614841.06616015 0.03321037991115209 0.0305120148488614 5.43829585137693e-07 6.264537169840562 -0.09927223063057633 TSTTGVATTQS(ph)PTPR ddPTM_KYSE-520_SHP099_60min_R1 6 TSTTGVATTQSPTPR 15 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 TSTTGVATTQS(1)PTPR;TSTTGVATTQS(0.995)PT(0.005)PR;TSTTGVATTQS(1)PTPR;TSTTGVATTQS(0.996)PT(0.004)PR;TSTTGVATTQS(1)PTPR;TSTTGVATTQS(0.911)PT(0.089)PR 372.73 6.596399999999999e-68 5765150000.0 5376670.0 6102120.0 4553990.0 3746050.0 4080470.0 5834690.0 4416710.0 5286660.0 6300510.0 5832000.0 True False 5078415.396974086 5808964.995731142 4847547.482041626 4102073.4657089943 4401579.7743015895 5798273.535441636 4863194.149735692 5268321.810375715 5156496.206932043 5780333.017227346 0.8785679617140901 1.00495334410984 0.8386277170526847 0.7096604042506598 0.7614751193717376 1.0031037170628097 0.8413345970278407 0.9114218496883025 0.8920759740942159 1.0 22.46272118116129 -6.2590618845616826 24.999621930136264 0.9185353014406257 0.8407275093229826 0.2168599991076926 0.0850675781796618 446.5105999429924 4695112.781260417 0.03167450746749911 0.03022348121789234 5.507292149467833e-07 6.2590618845616826 -0.0778077921176431 TSVATSTEGKDKDVT(ph)LSPVK ddPTM_KYSE-520_SHP099_60min_R1 1 TSVATSTEGKDKDVTLSPVK 20 2 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TSVATSTEGKDKDVT(0.581)LS(0.419)PVK 86.791 0.0044501 249510000.0 298130.0 294780.0 316280.0 263540.0 232480.0 220960.0 252770.0 280300.0 479190.0 259530.0 True False 281592.13459257927 280618.3263261993 336667.9148658924 288586.76236380986 250774.85336974237 219580.90667904972 278322.4583974703 279327.70472251205 392181.17539687507 257230.7661112846 1.0947062781391994 1.0909205402156157 1.3088166705542572 1.1218983122686026 0.9749022527937065 0.8536339178963274 1.0819952162217674 1.0859031714801477 1.5246277936567179 1.0 17.97270368110605 -10.391486878996613 6.273461860321743 0.9999824020938144 1.1155965453267485 0.043065617547234925 0.17209173354666016 4.391000016338933e-05 4.259051956743393e-06 0.17273425267956932 0.041887835700239184 4.059879288656684e-11 10.391486878996613 0.11561414323293406 TSVIQIPFTLETQGEDEEDKENIPSTDVS(ph)SPAMDAAGIHLR ddPTM_KYSE-520_SHP099_60min_R1 1 TSVIQIPFTLETQGEDEEDKENIPSTDVSSPAMDAAGIHLR 41 1 A0A087WV86;Q6PGQ7;Q6PGQ7-2 A0A087WV86 BORA Protein aurora borealis 1 TSVIQIPFTLETQGEDEEDKENIPS(0.001)T(0.001)DVS(0.55)S(0.448)PAMDAAGIHLR 137.36 4.071e-07 115360000.0 21905.0 34187.0 26268.0 31736.0 29642.0 43001.0 24423.0 35770.0 48470.0 39256.0 True False 20689.885983465094 32544.605204266816 27961.277310286023 34752.17989822368 31974.6567600908 42732.61480858895 26891.915185510185 35645.92221878078 39669.069829267166 38908.22238070585 0.5317612760876215 0.8364454403963035 0.7186470005412458 0.8931834396900358 0.8217969057344207 1.0982926536828774 0.6911627810281454 0.9161539653494218 1.0195549270053164 1.0 15.24778744824049 -3.5300001813754887 0.5357414741331273 0.9317492126204373 3.336250692533243e-24 0.5024215582949272 0.11457020643741787 7.61457692016837 0.9339549291912684 0.060598802762738144 5.246064745267636 0.00029512079941457664 3.5300001813754887 -0.9317492126204373 TSVLGGGEDGIEPVS(ph)PPEGMTEPGHSR ddPTM_KYSE-520_SHP099_60min_R1 2 TSVLGGGEDGIEPVSPPEGMTEPGHSR 27 0 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9J7T7;A0A384DVL6;Q9Y618-2 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR;TSVLGGGEDGIEPVS(1)PPEGMTEPGHSR 146.5 9.432299999999999e-07 926040000.0 401440.0 439390.0 346710.0 361550.0 355430.0 449440.0 368070.0 422210.0 536080.0 413420.0 True False 379171.3229492003 418281.04486216424 369059.48135561374 395911.60329602845 383400.3188799358 446634.8782486965 405278.10761703056 420745.4520545547 438741.38547706883 409757.4204358928 0.9253555983094691 1.0208016353119467 0.9006779693288157 0.966209722022519 0.9356763288681414 1.0899982672030053 0.9890683790080061 1.0268159429717538 1.070734448226327 1.0 18.644410550251184 -6.24314424794328 24.9917984126461 1.0341084670796883 0.9518807227932264 0.5293294560763318 0.04031576908340429 664.533056696301 907776.901091329 0.012708162739836281 0.012685506456725462 5.712888554683956e-07 6.24314424794328 -0.08222774428646185 TSVS(ph)PAPDK ddPTM_KYSE-520_SHP099_60min_R1 1 TSVSPAPDK 9 0 O75362 O75362 ZNF217 Zinc finger protein 217 1 TSVS(1)PAPDK 154.15 0.00021808 674520000.0 1458200.0 1354300.0 1220500.0 1124800.0 1319200.0 1335500.0 1185100.0 1431200.0 1548200.0 1346500.0 True False 1377310.7391503658 1289237.3951542552 1299175.3828690453 1231700.65381655 1423013.534778753 1327164.649121429 1304901.4734614135 1426235.5012445915 1267085.9069459755 1334571.057561147 1.0320250325728801 0.9660312861199489 0.9734778642983721 0.9229187511884255 1.0662703396095143 0.994450345376699 0.977768449321872 1.0686845733422063 0.949433077967016 1.0 20.34794469133602 -5.75621711322835 24.99999077901477 1.010536184138837 0.9730620131564874 0.1478165216431273 0.042077556934206686 246.08153409653485 1178030.5106625452 0.012164911421799271 0.015215163299485308 1.7530039180792133e-06 5.75621711322835 -0.03747417098234951 TSVS(ph)PAPDKTK ddPTM_KYSE-520_SHP099_60min_R1 1 TSVSPAPDKTK 11 1 O75362 O75362 ZNF217 Zinc finger protein 217 1 T(0.006)S(0.039)VS(0.955)PAPDKTK 97.417 0.0012950999999999998 492990000.0 314940.0 306630.0 234780.0 217440.0 230420.0 253660.0 192350.0 202700.0 323000.0 279550.0 True False 297469.65038267506 291899.03453898686 249914.2944612818 238105.43222428026 248552.7430895391 252076.81384960082 211794.61515509515 201996.88101053587 264351.34216738807 277073.4044866093 1.073613149316363 1.053507950645238 0.9019786468656177 0.8593586694669126 0.8970646011661918 0.9097835077916454 0.7643989344539599 0.7290374238004436 0.9540841448034538 1.0 18.079908711576252 -4.799595016998232 2.9262436061868407 0.8605521327506082 1.0743412926322564 0.4861352234969637 0.07652693373367005 0.20080119676369954 3.4401299410190176 0.021010955293496905 0.05926701722120748 1.58637180706406e-05 4.799595016998232 0.21378915988164826 TSVSQNVIPSS(ph)AQK ddPTM_KYSE-520_SHP099_60min_R1 4 TSVSQNVIPSSAQK 14 0 Q03188;H0Y8J2;Q03188-2 Q03188 CENPC Centromere protein C 1 TSVSQNVIPS(0.056)S(0.944)AQK;TSVSQNVIPS(0.226)S(0.774)AQK;TSVSQNVIPS(0.092)S(0.908)AQK;TSVSQNVIPS(0.183)S(0.817)AQK 318.32 1.2368e-42 4435830000.0 7566720.0 8771400.0 6684530.0 5006110.0 5004040.0 7489330.0 5949070.0 8322100.0 8661400.0 9152700.0 True False 7146978.957717648 8350008.777860187 7115425.499426155 5481889.189258152 5397829.478907116 7442586.313444093 6550460.052928102 8293232.577492738 7088708.0961257415 9071614.198692854 0.7878398266482132 0.9204545734609564 0.7843615638384875 0.6042903797703442 0.5950241446207996 0.8204257974855796 0.7220831827120657 0.9141959077897873 0.7814163985442818 1.0 23.11292785538607 -8.10284495651436 0.8348350907477312 0.993748827420926 0.7478444060111458 0.34016735159067824 0.10100159006222642 0.9429146050837198 1.4513128467315088 0.10703842410285838 0.03828614733878988 7.891417916023925e-09 8.10284495651436 -0.2459044214097802 TSYEEFTHK ddPTM_KYSE-520_SHP099_60min_R1 2 TSYEEFTHK 9 0 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 ; 134.23 0.00085416 887630000.0 885560.0 795830.0 532190.0 573400.0 832100.0 853860.0 596150.0 624130.0 646690.0 672020.0 False True 836436.2214799065 757597.1322348164 566495.8189341063 627895.7636010034 897581.5359986357 848530.743016716 656414.6598633216 621965.0387030371 529267.3977282603 666066.4256236485 1.2557849927606517 1.1374197874115428 0.8505094944602369 0.9426924094141133 1.3475856182935748 1.2739431239492718 0.985509304494233 0.9337883051539213 0.7946165387824479 1.0 19.345306536326582 -6.972564453306593 9.311629250328739 0.9102485784361611 1.123558953408837 0.3246173710507273 0.14823394137980003 0.4005020258089302 127.58089352986704 0.06950470374260902 0.04651595952870212 1.0652107648342975e-07 6.972564453306593 0.2133103749726759 TSYQPS(ph)SPGR ddPTM_KYSE-520_SHP099_60min_R1 1 TSYQPSSPGR 10 0 Q14134-2;Q14134;E9PRL4;H0YD78;E9PIQ2;E9PPX1;H0YF27 Q14134-2 TRIM29 Tripartite motif-containing protein 29 1 TSYQPS(0.527)S(0.473)PGR 112.5 0.0017717 1123800000.0 986640.0 826820.0 714350.0 753640.0 715830.0 782610.0 778460.0 860550.0 1069300.0 850610.0 True False 931909.112381922 787098.3261178788 760398.1440004118 825265.7190098723 772161.7484844398 777725.4406955607 857154.3338374594 857564.9529038804 875142.0748594058 843074.2571645656 1.1053701432138687 0.9336049813275694 0.9019349571386384 0.9788766671460387 0.9158881817615694 0.9224874725877805 1.0167008736813385 1.017187923384175 1.0380367653529012 1.0 19.68530018238348 -6.788188139393868 19.671783444733894 1.019414534690997 0.9547634190254487 0.21168447479032693 0.0545815128690264 31.495820632706067 23160.226244568392 0.022958454497131756 0.015496223658941743 1.6285903631139254e-07 6.788188139393868 -0.06465111566554838 TSYQPSS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 10 TSYQPSSPGR 10 0 Q14134-2;Q14134;E9PRL4;H0YD78;E9PIQ2;E9PPX1;H0YF27 Q14134-2 TRIM29 Tripartite motif-containing protein 29 1 TS(0.001)YQPS(0.202)S(0.797)PGR;TSYQPSS(1)PGR;TSYQPS(0.004)S(0.996)PGR;TSYQPSS(1)PGR;TSYQPSS(1)PGR;TSYQPSS(1)PGR;TSYQPSS(1)PGR;TSYQPS(0.003)S(0.997)PGR;TSYQPS(0.09)S(0.909)PGR;TSYQPS(0.007)S(0.993)PGR 163.71 6.6178e-05 23730060000.0 21222980.0 18438280.0 16105420.0 15145140.0 15758390.0 18054550.0 17281730.0 20522710.0 24767150.0 18717870.0 True False 20045698.99243825 17552477.35237748 17143601.142783117 16584529.55204764 16998485.640025888 17941864.85645474 19028735.921831373 20451521.509046502 20270059.889043394 18552044.234082498 1.0805115996657508 0.9461209304434126 0.9240815150326189 0.8939462057544969 0.9162594388815373 0.9671098575483785 1.0256948335037457 1.1023864136478512 1.092605193976666 1.0 24.14507482916446 -6.858679242671246 2.7831018729874066 1.0723681322203038 0.9469714307106446 0.46302150533914255 0.05382191019491185 0.2262107238857834 3.5339688322535587 0.026393514258414907 0.016728769958179474 1.384588618488052e-07 6.858679242671246 -0.1253967015096592 TT(ph)ASPSVR ddPTM_KYSE-520_SHP099_60min_R1 1 TTASPSVR 8 0 Q9Y3P9;Q9Y3P9-2 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 T(0.104)T(0.596)AS(0.3)PSVR 85.73100000000001 0.024328 526870000.0 727500.0 642530.0 587670.0 607290.0 571410.0 588090.0 538910.0 642870.0 806490.0 579240.0 True False 687144.1247647039 611661.8943428079 625552.1485052455 665006.6590116044 616376.7161218367 584419.5121690907 593388.2820547556 640640.0340169864 660051.7459584415 574108.3842419011 1.196889200062919 1.065411882375652 1.0896063629714707 1.1583294675094018 1.0736243069080937 1.0179602462012556 1.0335823310407029 1.1158869154348598 1.1496988444612717 1.0 19.130963599225385 -5.902008649911323 8.579977443469419 1.066289864956291 1.1202659305944191 0.24381516980960038 0.053374468291251094 0.4715805671344258 36.99607789263844 0.017164417164666556 0.019485863245695477 1.2531162161806104e-06 5.902008649911323 0.05397606563812807 TT(ph)PDIIKDWPR ddPTM_KYSE-520_SHP099_60min_R1 1 TTPDIIKDWPR 11 1 Q7Z2Z1;Q7Z2Z1-2 Q7Z2Z1 TICRR Treslin 1 T(0.132)T(0.868)PDIIKDWPR 121.45 0.00059581 92367000.0 191350.0 177880.0 150400.0 160840.0 165770.0 170570.0 138330.0 161680.0 195850.0 191200.0 True False 180735.43405323187 169334.3777966766 160095.02464850846 176126.18524169084 178815.1558977211 169505.40936027124 152313.74637070092 161119.16981639565 160288.5769767272 189506.11675134927 0.9537182078949705 0.8935562645656446 0.8448013573016693 0.9293957802575089 0.943585141013386 0.8944587766667135 0.8037405281780513 0.8502056428489847 0.8458227086518881 1.0 17.53188488992774 -6.536390430835921 24.97545107305931 0.8605508204697079 0.9100483849018939 0.07062487721658162 0.05561715271507411 450.90213749799983 833454.8989137018 0.02055484579394904 0.015929562718809052 2.908101558599863e-07 6.536390430835921 0.049497564432186 TT(ph)PDKAPK ddPTM_KYSE-520_SHP099_60min_R1 1 TTPDKAPK 8 1 A0A0C4DFT8;G3XAA4;Q9NQC1-2;Q9NQC1;A0A087X085 A0A0C4DFT8 JADE2 Protein Jade-2 1 T(0.167)T(0.833)PDKAPK 85.53299999999999 0.016708 976560000.0 2186700.0 1593100.0 1630500.0 1812000.0 1922000.0 2107200.0 2058300.0 1565000.0 2103500.0 2230300.0 True False 2065399.391921623 1516565.0847081481 1735604.6388922413 1984211.9352023366 2073250.465315921 2094048.1831738485 2266373.0510721733 1559571.380273747 1721557.4249198136 2210541.277147142 0.9343410201266021 0.6860605139504028 0.7851491654261983 0.8976136097142238 0.9378926721475183 0.9473010998810046 1.0252570601156499 0.7055156112201093 0.7787945164007992 1.0 21.075968243122823 -5.262535538402273 22.952625145406728 0.8955454297288937 0.7902712507160008 0.14523895769003803 0.10658161241276713 59.872611089927375 1253736.4857249856 0.030913579247055966 0.048979503836822806 5.463418407930686e-06 5.262535538402273 -0.10527417901289293 TT(ph)PDQELAPASEPVWERPWSVEEIR ddPTM_KYSE-520_SHP099_60min_R1 3 TTPDQELAPASEPVWERPWSVEEIR 25 1 Q641Q2;E7ESD2;Q641Q2-2;A0A087WYF6;Q5T1D7 Q641Q2 FAM21A WASH complex subunit FAM21A 1 T(0.131)T(0.869)PDQELAPASEPVWERPWSVEEIR;T(0.214)T(0.786)PDQELAPASEPVWERPWSVEEIR;T(0.184)T(0.816)PDQELAPASEPVWERPWSVEEIR 151.67 1.6728e-06 1818680000.0 14091.9 18537.1 32895.6 37351.1 20381.0 26241.3 25458.3 36013.1 44214.0 17050.4 True False 13310.194215493802 17646.54989124563 35016.103010820945 40900.93731398231 21984.868747972825 26077.518312984004 28031.87341306448 35888.17896162074 36185.85214423802 16899.346721010465 0.7876159022730521 1.044214914491706 2.072038853862111 2.420267362354982 1.3009300957556944 1.5431080705955684 1.6587548546011706 2.1236429759146853 2.1412574546002543 1.0 14.044679856792111 -4.6541143955293425 5.264653506887499 1.813520838332015 0.8552291218233542 0.42045129381274493 0.40904060148543225 0.1818436326127187 7.542240704589271 0.10650567483725124 0.29498848850742904 2.2176122117401612e-05 4.6541143955293425 -0.9582917165086607 TT(ph)PDQELVPASEPVWERPWSVEEIR ddPTM_KYSE-520_SHP099_60min_R1 1 TTPDQELVPASEPVWERPWSVEEIR 25 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65 A0A0A0MR88 FAM21C WASH complex subunit FAM21C 1 T(0.175)T(0.825)PDQELVPASEPVWERPWSVEEIR 175.86 3.7619e-10 1221000000.0 40014.0 18328.0 24070.0 24332.0 31983.0 33726.0 22066.0 14724.0 39070.0 31968.0 True False 37794.34365406857 17447.495369111133 25621.590713361693 26644.505964317443 34499.8801416228 33515.50352397553 24296.646623406956 14672.925880607436 31975.872874550587 31684.788390727634 1.1928229782695619 0.5506584154501419 0.8086401082249203 0.8409242200309218 1.0888467903329595 1.0577789919462945 0.7668236986085483 0.46309054362822827 1.009186884262359 1.0 14.951502759964681 TT(ph)PLKPSPLPVIPDTIK ddPTM_KYSE-520_SHP099_60min_R1 1 TTPLKPSPLPVIPDTIK 17 1 Q7Z6Z7-2;Q7Z6Z7-3;Q7Z6Z7 Q7Z6Z7-2 HUWE1 E3 ubiquitin-protein ligase HUWE1 1 T(0.437)T(0.563)PLKPSPLPVIPDTIK 184.95 9.577000000000001e-12 878860000.0 1845000.0 1833500.0 1433600.0 1257400.0 1493300.0 1919000.0 1463200.0 1819800.0 2088100.0 1991000.0 True False 1742654.172083683 1745415.907860393 1526012.1498411014 1376902.9179489044 1610814.214285256 1907022.8091830914 1611114.5354558637 1813487.5385445114 1708953.6767174085 1973361.2889745599 0.8830892659241523 0.8844887743629466 0.7733060126227977 0.6977449723179683 0.8162794229749494 0.9663830033749468 0.8164316106013539 0.9189840444710834 0.8660115541262348 1.0 20.912223682554853 -6.132616594418736 7.791624178700067 0.902202144942949 0.8057283754562593 0.3501304078588815 0.06895533433827078 0.3646423663403441 21.39986164147149 0.023758873399439783 0.02378592345497764 7.368573257480126e-07 6.132616594418736 -0.09647376948668973 TT(ph)PPEAAQNGQS(ph)PMAALILVADNAGGSHASK ddPTM_KYSE-520_SHP099_60min_R1 1 TTPPEAAQNGQSPMAALILVADNAGGSHASK 31 0 Q7Z5L9;Q7Z5L9-2 Q7Z5L9 IRF2BP2 Interferon regulatory factor 2-binding protein 2 2 T(0.476)T(0.524)PPEAAQNGQS(1)PMAALILVADNAGGSHASK 64.645 0.037315 67245000.0 23522.0 26212.0 21081.0 21932.0 18574.0 22092.0 15685.0 16846.0 23066.0 19160.0 True False 22217.18777005552 24952.736174985883 22439.914990792582 24016.410685903746 20035.668128396395 21954.11563338868 17270.592870848282 16787.565157885958 18877.79584654169 18990.257306254447 1.1699255787723466 1.3139756756622614 1.1816540781362657 1.264670104179891 1.0550498503144368 1.1560725733904662 0.9094449112682748 0.8840093573854299 0.9940779391295704 1.0 14.212971832795807 -6.327182585918749 1.194767512258362 0.9373249726029091 1.2350158487734109 0.7278141751967797 0.07253524052869707 0.22312712974196958 0.6536700950031527 0.03657120987711995 0.031056779714875884 4.7077935990826934e-07 6.327182585918749 0.2976908761705017 TT(ph)PPESAPQNGPSPMAALMSVADTLGTAHS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 TTPPESAPQNGPSPMAALMSVADTLGTAHSPK 32 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 2 T(0.479)T(0.521)PPESAPQNGPS(0.001)PMAALMS(0.005)VADT(0.01)LGT(0.271)AHS(0.712)PK 65.77 0.020206000000000002 37552000.0 30325.0 37111.0 32863.0 37629.0 37996.0 29690.0 29784.0 33538.0 43507.0 36186.0 True False 28642.811798611223 35328.131855253356 34981.4015626591 41205.2488464286 40986.06903233282 29504.693697053695 32794.85738382818 33421.664505828056 35607.225522218425 35865.420192282014 0.7986191614388211 0.9850193212808286 0.9753517838384855 1.1488851552698573 1.1427739815286686 0.8226501610429452 0.9143865374505051 0.9318631798163113 0.9928010136594148 1.0 15.130305912753448 -9.201833858110803 14.230517586647585 1.0000035248337455 0.9722935590060328 0.006349172967164973 0.10880432042847259 0.0 0.0 0.11228156358604031 0.027232279204397056 6.282986721684098e-10 9.201833858110803 -0.02770996582771279 TT(ph)PTLGLEEVLSSR ddPTM_KYSE-520_SHP099_60min_R1 1 TTPTLGLEEVLSSR 14 0 O43474-4;O43474-1;O43474 O43474-4 KLF4 Krueppel-like factor 4 1 T(0.107)T(0.892)PT(0.001)LGLEEVLSSR 79.633 0.047751 28337000.0 37147.0 29247.0 26417.0 22981.0 23812.0 35181.0 25098.0 31185.0 38651.0 30276.0 True False 35086.38185929137 27841.930219357997 28119.882088694456 25165.10733051041 25685.868928253225 34961.42232927065 27635.150772875342 31076.826513633707 31632.952712420152 30007.778194371556 1.169242908689334 0.9278237808549319 0.9370864416069562 0.8386194795065012 0.8559736999479364 1.1650786706970606 0.9209329192542073 1.0356257071862345 1.0541584421053014 1.0 14.87304888386972 -6.238826881721006 24.926037299326385 1.0302466512532724 0.9383204916973154 0.16136785865238634 0.10089742550157468 1490.9979861047727 1643546.122625583 0.03380422397629931 0.03378288508090661 5.769964196205158e-07 6.238826881721006 -0.09192615955595707 TT(ph)PTMSEEPPLDLTGK ddPTM_KYSE-520_SHP099_60min_R1 3 TTPTMSEEPPLDLTGK 16 0 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 T(0.141)T(0.858)PT(0.001)MSEEPPLDLTGK;T(0.045)T(0.955)PTMSEEPPLDLTGK;T(0.136)T(0.862)PT(0.002)MSEEPPLDLTGK 234.22 2.8010000000000005e-22 1110120000.0 1609640.0 1767370.0 1389660.0 1051010.0 1326020.0 1637660.0 1322930.0 1648200.0 2012000.0 1486100.0 True False 1520350.0604622103 1682462.892323544 1479239.707134617 1150897.6744023222 1430370.2299782594 1627438.7564808677 1456664.674952587 1642482.778892772 1646671.5183925226 1472934.3101683033 1.0321913543371048 1.1422524960609406 1.0042808405797765 0.7813638846329922 0.9711025265035884 1.104895680171175 0.9889542696484155 1.1151093212738696 1.1179531273219967 1.0 20.49026165990997 -6.250919265483766 24.13292337304464 1.0678000494141173 0.9845261354989506 0.1537674856261665 0.0927027568762225 957.22109145111 2195847.368002952 0.03395478041929893 0.03358523562439035 5.611522834765934e-07 6.250919265483766 -0.0832739139151667 TTAGS(ph)VDWTDQLGLR ddPTM_KYSE-520_SHP099_60min_R1 11 TTAGSVDWTDQLGLR 15 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 TTAGS(0.999)VDWTDQLGLR;TTAGS(1)VDWTDQLGLR;TTAGS(1)VDWTDQLGLR;TTAGS(1)VDWTDQLGLR;TTAGS(1)VDWTDQLGLR;TTAGS(1)VDWTDQLGLR;TTAGS(1)VDWTDQLGLR;T(0.032)T(0.151)AGS(0.815)VDWT(0.001)DQLGLR;TTAGS(1)VDWTDQLGLR;TTAGS(1)VDWTDQLGLR;TT(0.001)AGS(0.999)VDWTDQLGLR 285.18 5.5137e-33 6548406000.0 5585099.0 5174262.0 4894876.0 4356031.0 4926054.0 5049741.0 4677907.0 5048198.0 6289162.0 5317604.0 True False 5275282.424851175 4925682.686794398 5210407.539038507 4770026.876551522 5313706.424386763 5018223.693312682 5150795.491532749 5030686.9793962715 5147208.717672239 5270494.165593316 1.0009085029045508 0.93457701157324 0.9885994321088402 0.9050435740335452 1.008198900792936 0.9521353284237561 0.9772889087247301 0.9545000566052143 0.9766083702879503 1.0 22.32950680572696 -8.044160644500769 6.334394642673933 0.9999975661599337 0.964359259060149 0.11495633856007526 0.02943609235102562 0.6549992037440128 86.82957614524689 0.02577952316887586 0.006684731286100772 9.03315277734106e-09 8.044160644500769 -0.03563830709978477 TTAPTEGKS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 3 TTAPTEGKSPLK 12 1 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 TTAPT(0.002)EGKS(0.998)PLK;TTAPTEGKS(1)PLK;TTAPTEGKS(1)PLK 201.97 4.3348000000000005e-08 4051250000.0 3747010.0 3466130.0 2918190.0 2648050.0 2783810.0 3397130.0 3183320.0 3743140.0 3761840.0 3441470.0 True False 3539155.8858207543 3299611.9120328017 3106301.1966690845 2899719.8758347384 3002880.0092877797 3375927.251568607 3505121.051809292 3730155.9209954427 3078784.684269244 3410981.2532231435 1.0375770557157107 0.9673497645039516 0.9106767132577591 0.8501131083891774 0.8803566441329057 0.9897231913481164 1.027599037226368 1.0935726830719756 0.9026096761335183 1.0 21.70175539523523 -6.449447689265964 5.969293453896536 1.0131875095427543 0.9261737169191855 0.2453972438769576 0.06428026342731086 0.3155745976304244 19.90992795248246 0.024245204406426808 0.02112704019176784 3.5526490753370983e-07 6.449447689265964 -0.08701379262356879 TTAPTEGKS(ph)PLKK ddPTM_KYSE-520_SHP099_60min_R1 4 TTAPTEGKSPLKK 13 2 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 TTAPT(0.077)EGKS(0.922)PLKK;TTAPT(0.002)EGKS(0.998)PLKK;TTAPTEGKS(1)PLKK;TTAPTEGKS(1)PLKK 119.56 7.9337e-05 10388700000.0 12148400.0 9797500.0 9317500.0 9970400.0 10146000.0 10330500.0 10424800.0 11154900.0 12108500.0 10632500.0 True False 11474504.034764992 9326813.393652685 9918120.958527101 10917983.818289926 10944432.477156762 10266023.517595582 11478640.520243477 11116206.255473219 9909901.63044525 10538304.321959827 1.0888377944119816 0.8850392917784102 0.9411496058108342 1.0360285188897913 1.0385382830851297 0.97416274990305 1.0892303134883063 1.0548382278455515 0.9403696579339519 1.0 23.329139411347477 -5.266717223471716 24.83306266547024 1.0231780354780284 0.9630119364065768 0.10308280652752821 0.06160611409024807 725.7146300783028 3414604.151621348 0.016868830200569396 0.025908245365258716 5.411065319403653e-06 5.266717223471716 -0.06016609907145165 TTAPTEGKS(ph)PLKKEDR ddPTM_KYSE-520_SHP099_60min_R1 2 TTAPTEGKSPLKKEDR 16 3 A0A494C001;A0A499FJY3;A0A087WWP4;Q96T37-4;Q96T37-2;Q96T37-3;Q96T37 A0A494C001 RBM15 Putative RNA-binding protein 15 1 TTAPTEGKS(1)PLKKEDR;TTAPTEGKS(1)PLKKEDR 103.1 0.0010867000000000001 7380600000.0 2798250.0 2651700.0 2604160.0 2275680.0 2398970.0 2254220.0 1928030.0 1970860.0 3412500.0 1950130.0 True False 2643025.4943269175 2524308.3517171554 2772028.3204033244 2491959.942991861 2587755.290727854 2240150.576819549 2122934.088159488 1964023.5466621805 2792876.0221244902 1932853.3653781842 1.3674216273564963 1.306000960514274 1.4341637964145026 1.2892648700768263 1.3388264920042348 1.158986303330485 1.0983420295538624 1.0161265111168418 1.4449497681258572 1.0 20.88230076193487 -6.2718251570730645 4.076564294979793 1.139317128919887 1.3483483745538367 0.4211298175016107 0.11946496806604925 0.21639760322768084 8.628521001935807 0.040936247772470236 0.03787670141913853 5.347796133725175e-07 6.2718251570730645 0.2090312456339498 TTAS(ph)PSVR ddPTM_KYSE-520_SHP099_60min_R1 1 TTASPSVR 8 0 Q9Y3P9;Q9Y3P9-2 Q9Y3P9 RABGAP1 Rab GTPase-activating protein 1 1 T(0.037)T(0.168)AS(0.774)PS(0.021)VR 55.06399999999999 0.053940999999999996 443130000.0 389480.0 377080.0 388550.0 351440.0 376780.0 364300.0 318670.0 370170.0 522330.0 361720.0 True False 367874.7679908687 358964.5107913809 413596.5547019806 384840.751935711 406430.4424150535 362026.2685697761 350884.2735194909 368885.96666832734 427488.038867776 358515.4422139017 1.0261057814390682 1.0012525780610901 1.1536366527141548 1.0734286633770793 1.1336483580881969 1.0097926782015143 0.9787145327763656 1.0289262978196578 1.1923838935024813 1.0 18.451675735415915 -6.291574208720701 24.96455725424372 1.0398183214146843 1.0773630307113702 0.06284275113070126 0.0685834486423501 2260.991068421972 1873060.9644947525 0.02504479263161146 0.022089621570006258 5.110057550557562e-07 6.291574208720701 0.03754470929668585 TTCMSSQGS(ph)DDEQIKR ddPTM_KYSE-520_SHP099_60min_R1 1 TTCMSSQGSDDEQIKR 16 1 Q9P0V9-2;E7EX04;E7EW69;Q9P0V9;B5ME97;C9JEW2;C9JNR7 Q9P0V9-2 SEPT10 Septin-10 1 TTCMSSQGS(1)DDEQIKR 261.28 1.8271e-29 556440000.0 221800.0 196120.0 199250.0 170970.0 165790.0 209080.0 180020.0 233080.0 236730.0 178350.0 True False 209496.3118526621 186698.10081787826 212093.97381127195 187218.9373959952 178836.72978393658 207775.05416571195 198218.17842589165 232271.4998812812 193745.79947766493 176769.95775420027 1.1851352713675931 1.0561641988820474 1.1998304265376922 1.0591106077896126 1.011691873754986 1.1753979963870584 1.1213340826924634 1.3139761010988993 1.09603352254612 1.0 17.4315135824138 TTDFSDFLSIVGCTK ddPTM_KYSE-520_SHP099_60min_R1 1 TTDFSDFLSIVGCTK 15 0 Q9UHD1;E9PPQ5;E9PIZ4;E9PSD5 Q9UHD1 CHORDC1 Cysteine and histidine-rich domain-containing protein 1 0 113.69 0.0038250999999999997 0.0 36234.0 39338.0 50650.0 43790.0 53071.0 53309.0 31748.0 52132.0 59771.0 34879.0 False True 34224.027789311745 37448.14343245817 53914.98004286535 47951.78843405641 57247.38576731591 52976.27875703052 34957.39767062103 51951.16625970027 48918.09310429396 34569.999195451404 0.9899921488518524 1.0832555482785624 1.5595886982247684 1.3870925527925884 1.6559845848896726 1.5324350590092275 1.01120620434439 1.5027818185930366 1.4150446700250554 1.0 15.077232949573878 -4.644361547643306 5.9897192915745014 1.4021613863630222 1.0146439778716816 0.3070801552430593 0.20805052809778796 0.21913099827125898 10.3718318429011 0.05240218787693889 0.1427049096788762 2.2679759888711858e-05 4.644361547643306 -0.38751740849134064 TTEEQVQAST(ph)PCPR ddPTM_KYSE-520_SHP099_60min_R1 2 TTEEQVQASTPCPR 14 0 Q14137 Q14137 BOP1 Ribosome biogenesis protein BOP1 1 TTEEQVQAS(0.018)T(0.982)PCPR;TTEEQVQAS(0.112)T(0.888)PCPR 293.42 3.3104e-32 176479000.0 218810.0 274870.0 217110.0 163838.0 176304.0 246170.0 183121.0 258670.0 266710.0 265350.0 True False 206672.17311307884 261664.83261171862 231105.25798828225 179409.11426030894 190178.12176745984 244633.56171787507 201632.657768735 257772.7341440317 218282.18721196314 262999.20543917606 0.785828127381457 0.9949263237307915 0.878729871454802 0.6821659934702767 0.7231129137819484 0.930168444080914 0.7666664141894781 0.9801274255318878 0.8299728010488053 1.0 18.004698915358603 -10.305165303947557 5.536114421269666 1.000022309096712 0.8432644803015041 0.18414232296783684 0.10013733665439893 2.8442216632628282e-05 3.569688766104185e-06 0.1000136076694051 0.024253412823139874 4.952616452645622e-11 10.305165303947557 -0.15675782879520783 TTEETSKPKDD ddPTM_KYSE-520_SHP099_60min_R1 1 TTEETSKPKDD 11 2 P20810-6;P20810-7;P20810-10;P20810-9;P20810-5;A0A0C4DGB5;P20810;B7Z574;P20810-8;P20810-4;E9PDE4;E9PCH5;P20810-3;P20810-2;E7EQ12;E7EQA0;H0Y7F0;A0A0C4DGD1;E7EVY3;A0A0A0MR45;H0YD33;H0Y9H6 P20810-6;E7EVY3 CAST Calpastatin 0 113.77 0.0030482 399470000.0 227970.0 318150.0 172510.0 152660.0 261360.0 278030.0 150520.0 228860.0 264610.0 249240.0 False True 215324.04965307168 302865.59644711425 183630.27062575932 167168.7605010974 281927.54506502 276294.7116400082 165736.03053363613 228066.1380763256 216563.49427527087 247031.92750578586 0.8716446162532107 1.2260180273257215 0.7433463053938987 0.6767091290140301 1.1412595445113742 1.1184574983067197 0.6709093525157972 0.9232253513910016 0.8766619621271369 1.0 17.91433798862543 -6.7497842016816865 24.999910556736346 0.8613012293472625 0.9599835086631805 0.06246431273319841 0.1798016228207362 722.1304860276222 1548943.7207834516 0.07208005660583411 0.055358395925873057 1.7791632459600028e-07 6.7497842016816865 0.098682279315918 TTFDEAMADLHTLS(ph)EDSYK ddPTM_KYSE-520_SHP099_60min_R1 12 TTFDEAMADLHTLSEDSYK 19 0 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 1 TTFDEAMADLHT(0.011)LS(0.839)EDS(0.149)Y(0.001)K;TTFDEAMADLHT(0.101)LS(0.889)EDS(0.008)Y(0.001)K;TTFDEAMADLHTLS(1)EDSYK;TTFDEAMADLHTLS(0.998)EDS(0.001)YK;TTFDEAMADLHTLS(1)EDSYK;TTFDEAMADLHT(0.001)LS(0.999)EDSYK;TTFDEAMADLHTLS(1)EDSYK;TTFDEAMADLHT(0.005)LS(0.995)EDSYK;TTFDEAMADLHTLS(1)EDSYK;TTFDEAMADLHTLS(1)EDSYK;TTFDEAMADLHTLS(1)EDSYK;TTFDEAMADLHTLS(1)EDSYK 358.26 6.0845e-78 3665695000.0 4920240.0 4346291.0 3498453.0 4150658.0 4264740.0 4344270.0 4253576.0 4659167.0 4697420.0 4772786.0 True False 4647304.4789447235 4137488.6564442036 3723968.878102714 4545135.288379171 4600350.774948711 4317155.799504862 4683568.972981275 4643005.437134757 3844486.940321766 4730502.829211317 0.9824123664501719 0.874640351316314 0.787224743870111 0.9608144107456223 0.9724866343047287 0.9126209105818526 0.9900784635535528 0.9815035747286197 0.8127015412783781 1.0 22.173562112435025 TTFDEAMADLHTLSEDSYK ddPTM_KYSE-520_SHP099_60min_R1 9 TTFDEAMADLHTLSEDSYK 19 0 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 ;;;;;;;; 344.96 9.3607e-65 5375287000.0 6535100.0 6303840.0 3709890.0 5338270.0 6524830.0 5836390.0 4969580.0 4966820.0 4931200.0 4855083.0 False True 6172584.975601132 6000994.064143251 3949035.4454338755 5845617.575790601 7038296.999795672 5799962.925111058 5471953.644826917 4949591.260684508 4035818.385435983 4812070.741817414 1.2827294748517937 1.2470710399150962 0.8206519931463874 1.2147821363039313 1.4626337345027187 1.2052946093890007 1.1371307568849829 1.0285782413113809 0.8386864204560183 1.0 22.19822642092357 -7.328907054455092 2.377461091611388 0.9221672949460947 1.1994849069991993 0.3521780875804884 0.15438930792806418 0.38432654432430025 4.115613452580942 0.11755654616838776 0.047092827256082694 4.68913725990674e-08 7.328907054455092 0.27731761205310457 TTFS(ph)PPVVAATVK ddPTM_KYSE-520_SHP099_60min_R1 2 TTFSPPVVAATVK 13 0 A0A1B0GV05;Q684P5-3;Q684P5-2;Q684P5 A0A1B0GV05 RAP1GAP2 Rap1 GTPase-activating protein 2 1 TTFS(1)PPVVAATVK;TTFS(1)PPVVAATVK 131.35 3.2451e-05 195066000.0 598790.0 641930.0 442270.0 410920.0 435860.0 664090.0 494300.0 632540.0 744660.0 697640.0 True False 565573.925041729 611090.719243426 470779.4318570203 449973.7132523966 470159.70229583594 659945.1679783224 544268.6679031118 630345.8663759462 609448.5153509815 691459.4523557071 0.8179422858634683 0.8837694201178741 0.6808489351807104 0.6507593637188677 0.6799526721256997 0.9544235250960561 0.787130273581283 0.9116165296872357 0.8813944379163151 1.0 19.39928512769185 -6.261778179796652 24.99998461197008 0.8939025699468635 0.7419553185217099 0.49272402933653514 0.08280718661836903 31.540659911169943 2327313.944400404 0.030383397952624333 0.028456191306313054 5.472954280726789e-07 6.261778179796652 -0.15194725142515353 TTGIVMDSGDGVTHTVPIYEGYALPHAILR ddPTM_KYSE-520_SHP099_60min_R1 2 TTGIVMDSGDGVTHTVPIYEGYALPHAILR 30 0 P60709;A0A2R8Y793;A0A2R8YEA7;P63261;I3L3I0;I3L1U9;I3L4N8 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ; 205.77 3.0874e-16 3231300000.0 706090.0 859950.0 581700.0 1011740.0 697430.0 621090.0 532070.0 429860.0 522540.0 420210.0 False True 666921.780144482 818636.7111887352 619197.3127529073 1107895.4654092772 752313.7731661194 617213.5469283619 585856.8281027889 428368.9159900779 427659.90816144546 416487.26631843316 1.6013017301579984 1.9655744062120524 1.4867136712878235 2.6600944494716314 1.8063307908936734 1.4819505825094295 1.406662041030712 1.0285282423558189 1.0268258906011067 1.0 18.667912861744128 -6.735189964564498 1.46804290319584 1.0210640807788778 1.9200425666448329 0.6170751989307772 0.30001366119242345 0.2794771010530504 1.2254904295800406 0.17770564528888402 0.10791320157519638 1.8399670062403532e-07 6.735189964564498 0.8989784858659551 TTGT(ph)PPDSSLVTYELHSRPEQDK ddPTM_KYSE-520_SHP099_60min_R1 3 TTGTPPDSSLVTYELHSRPEQDK 23 1 Q13561;Q13561-3;Q13561-2;F8VW18;F8W1I6;H0YI98 Q13561 DCTN2 Dynactin subunit 2 1 T(0.001)T(0.004)GT(0.995)PPDSSLVTYELHSRPEQDK;T(0.009)T(0.037)GT(0.953)PPDSSLVTYELHSRPEQDK;T(0.133)T(0.133)GT(0.735)PPDSSLVTYELHSRPEQDK 269.29 2.6315999999999997e-37 2333560000.0 1768320.0 1559250.0 1424250.0 1884400.0 1683270.0 1704580.0 1595710.0 1709180.0 1885380.0 1668890.0 True False 1670227.7645414723 1484341.2895180327 1516059.4338805724 2063492.8094344833 1815733.7725038133 1693941.0839381556 1757019.9394288363 1703251.2535056095 1543042.5185620754 1654104.932976773 1.0097471637036257 0.8973682744823033 0.9165436869547507 1.2474981292274878 1.0977137763782425 1.0240832066740122 1.0622179430097307 1.0297117308273733 0.9328564880011412 1.0 20.65761932830936 TTGT(ph)PPDSSLVTYELHSRPEQDKFSQAAK ddPTM_KYSE-520_SHP099_60min_R1 4 TTGTPPDSSLVTYELHSRPEQDKFSQAAK 29 2 Q13561;Q13561-3;Q13561-2;F8VW18;F8W1I6;H0YI98 Q13561 DCTN2 Dynactin subunit 2 1 T(0.032)T(0.032)GT(0.922)PPDS(0.014)S(0.001)LVTYELHSRPEQDKFSQAAK;T(0.048)T(0.048)GT(0.904)PPDSSLVTYELHSRPEQDKFSQAAK;T(0.029)T(0.029)GT(0.941)PPDSSLVTYELHSRPEQDKFSQAAK;T(0.226)T(0.226)GT(0.548)PPDSSLVTYELHSRPEQDKFSQAAK 202.76 1.3651e-15 5912410000.0 2610280.0 2742770.0 2717900.0 2900920.0 2447840.0 2269400.0 1957150.0 1967010.0 3476300.0 2109480.0 True False 2465482.564935825 2611003.2122182944 2893100.182793754 3176622.564606598 2640471.0816955874 2255235.8328088117 2154997.821943301 1960186.901413584 2845091.5503916102 2090791.6483506074 1.179210069487701 1.2488108101436477 1.3837343310014059 1.5193396085700772 1.2629049306651925 1.0786516363732042 1.030709025283961 0.9375333515225893 1.3607723909917366 1.0 20.9956178709131 -6.180168284762241 4.000124691188456 1.0736790301773393 1.3357740424774804 0.4462898066529244 0.1332424490365012 0.21977078111852566 6.617152439662554 0.046724420988477004 0.04626546315811272 6.604374855080506e-07 6.180168284762241 0.2620950123001411 TTHFVEGGDAGNREDQINR ddPTM_KYSE-520_SHP099_60min_R1 5 TTHFVEGGDAGNREDQINR 19 1 P18124;A8MUD9 P18124 RPL7 60S ribosomal protein L7 0 ;;;; 161.95 1.242e-08 8186330000.0 997546.0 1053500.0 721073.0 657997.0 910684.0 902457.0 663312.0 721666.0 771998.0 721738.0 False True 942210.1348213496 1002888.2786642606 767554.5193375921 720532.8370459891 982349.6497168383 896824.4311135737 730366.0502612755 719162.7090841101 631822.6236858803 715343.9628236664 1.3171427785623266 1.4019665095174283 1.0729866459036512 1.0072536772405833 1.373254966518798 1.2536967916434945 1.0209998101868543 1.0053383357641965 0.8832431061442058 1.0 19.44827758225438 -6.846320722508577 4.099545506855583 0.9678366104601989 1.2336566516081306 0.5356827495645184 0.11936535262198227 0.19965431711812814 6.303187530658343 0.05685503751329965 0.037844299428643695 1.4245551840592967e-07 6.846320722508577 0.2658200411479318 TTHLAGALS(ph)PGEAWPFESV ddPTM_KYSE-520_SHP099_60min_R1 13 TTHLAGALSPGEAWPFESV 19 0 Q9Y3X0 Q9Y3X0 CCDC9 Coiled-coil domain-containing protein 9 1 TTHLAGALS(1)PGEAWPFESV;T(0.001)T(0.001)HLAGALS(0.999)PGEAWPFESV;T(0.004)T(0.004)HLAGALS(0.992)PGEAWPFESV;T(0.062)T(0.062)HLAGALS(0.876)PGEAWPFESV;TTHLAGALS(1)PGEAWPFESV;TTHLAGALS(0.999)PGEAWPFESV;TTHLAGALS(1)PGEAWPFESV;TTHLAGALS(1)PGEAWPFESV;TTHLAGALS(1)PGEAWPFESV;TTHLAGALS(1)PGEAWPFESV;TTHLAGALS(1)PGEAWPFESV;TTHLAGALS(1)PGEAWPFESV;TTHLAGALS(1)PGEAWPFESV 199.15 4.1033999999999995e-13 3381801000.0 1195881.0 1430695.0 1087325.0 1081816.0 1022129.0 1354080.0 1010438.0 1292506.0 1596075.0 1343506.0 True False 1129543.0970003302 1361962.2646830243 1157415.7092815132 1184631.467380161 1102564.7371815266 1345628.6844495265 1112582.9339645652 1288022.5983591694 1306268.0137765112 1331603.582071851 0.8482577789726778 1.022798588874279 0.8691893930479537 0.8896277265468037 0.8279977254687455 1.0105324907250952 0.8355211332741309 0.9672718034860843 0.9809736406266495 1.0 20.34473322583294 -7.497223291892443 21.277949339814516 0.9850322936012792 0.9048111467209624 0.2606075246764389 0.06382607671170927 153.0087141649106 126904.66579607253 0.033680408346611165 0.01601695302720106 3.182560791879797e-08 7.497223291892443 -0.08022114688031678 TTHLAGALS(ph)PGGGQSAPAFPESGPSLR ddPTM_KYSE-520_SHP099_60min_R1 3 TTHLAGALSPGGGQSAPAFPESGPSLR 27 0 A0A2R8Y4Z8 A0A2R8Y4Z8 1 TTHLAGALS(0.999)PGGGQSAPAFPESGPSLR;TTHLAGALS(1)PGGGQSAPAFPESGPSLR;TTHLAGALS(1)PGGGQSAPAFPESGPSLR 180.33 4.6229e-11 6748500000.0 1116030.0 1813680.0 1145020.0 1720320.0 1190690.0 1501410.0 1267170.0 1774780.0 1816760.0 1661600.0 True False 1054121.5911493518 1726548.0904108183 1218829.8212967748 1883818.6955669306 1284390.5289006291 1492039.1432702397 1395267.9099874296 1768623.7024167667 1486882.1807926425 1646879.5167052406 0.6400720759817544 1.048375471852952 0.74008438925464 1.1438715925835985 0.7798934383920145 0.9059795377473784 0.8472191777445948 1.0739241604966272 0.9028481839201632 1.0 20.651303582791638 -4.246335593244745 24.336468585112417 0.9317987520499896 0.6400717714246491 0.3436910886559955 0.12324940922150479 2175.668471479429 3505535.074584809 0.028393302979955137 0.6326626511570576 5.671062149300015e-05 4.246335593244745 -0.2917269806253405 TTHLHNDLWEVFSNPEDWK ddPTM_KYSE-520_SHP099_60min_R1 1 TTHLHNDLWEVFSNPEDWK 19 0 Q02809;Q02809-2 Q02809 PLOD1 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 0 155.11 6.5475e-07 119580000.0 221930.0 231210.0 174560.0 178580.0 223020.0 199560.0 171660.0 185960.0 182950.0 160220.0 False True 209619.1004935134 220102.32454671478 185812.416905875 195552.18950796514 240570.40518977956 198314.47201697648 189013.068040154 185314.9481633904 149730.89179419065 158800.5754492738 1.3200147411334333 1.3860297667310582 1.1700991408890056 1.2314324992508041 1.514921495146759 1.2488271623444132 1.190254301695091 1.1669664775401658 0.9428863300436823 1.0 17.27685661485414 -7.368665827175867 1.3554103574234209 0.9717675341539411 1.3132769541682823 0.6562158002208494 0.09396074098888682 0.2875946460894634 0.9266628199617514 0.08444844422007121 0.030380604203191934 4.2789200587909294e-08 7.368665827175867 0.34150942001434115 TTHS(ph)PYEER ddPTM_KYSE-520_SHP099_60min_R1 8 TTHSPYEER 9 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 TTHS(0.999)PYEER;T(0.001)T(0.001)HS(0.995)PY(0.003)EER;TTHS(1)PYEER;T(0.005)T(0.005)HS(0.971)PY(0.018)EER;T(0.002)T(0.002)HS(0.994)PY(0.003)EER;TTHS(1)PYEER;T(0.008)T(0.011)HS(0.977)PY(0.004)EER;T(0.008)T(0.028)HS(0.962)PY(0.002)EER 205.52 4.1655e-07 3826530000.0 3266400.0 3112230.0 3069600.0 2976800.0 3089390.0 3013510.0 2766260.0 2877910.0 3659030.0 2898730.0 True False 3085206.280593032 2962713.7992475303 3267471.32753365 3259714.176992444 3332507.4167754147 2994701.5662852195 3045900.556895938 2867927.201919245 2994642.388640051 2873049.507377813 1.0738437582333382 1.0312087528041076 1.1372833357528251 1.13458336468679 1.1599199415874115 1.0423424861266788 1.0601629206438155 0.998217118972223 1.042321888623915 1.0 21.454151422421926 -6.431488224614306 6.804705126703067 1.0285598523413302 1.1062921927413012 0.5236950339878595 0.03776524453177437 0.23800489858654117 15.101955929230048 0.014685808735012795 0.012885022898032769 3.7026424454491427e-07 6.431488224614306 0.07773234039997101 TTIFS(ph)PEGR ddPTM_KYSE-520_SHP099_60min_R1 1 TTIFSPEGR 9 0 P25789;H0YLS6;H0YLC2;H0YMI6;H0YMA1;H0YMZ1;H0YL69 P25789 PSMA4 Proteasome subunit alpha type-4;Proteasome subunit alpha type 1 TTIFS(1)PEGR 182.54 1.0705e-05 328050000.0 387350.0 321510.0 348300.0 255310.0 273210.0 303010.0 254120.0 323680.0 368600.0 314120.0 True False 365862.9233369184 306064.1770036515 370751.97529970395 279574.5856382498 294710.07264774304 301118.8021941474 279808.92957220046 322557.22962748 301671.5316498429 311337.14118166233 1.1751342032251808 0.9830634913714515 1.1908376041886168 0.8979801914321576 0.9465946514739224 0.9671791841194026 0.8987328929346549 1.0360383872069758 0.9689545246830039 1.0 18.24811816882288 -5.2681590146389246 24.997599457754358 0.9581243585603091 1.1030169399310488 0.5458878188261059 0.06527117267219365 403.3546047324167 1500511.2398770137 0.017434698529330345 0.026510373918351447 5.393131196995689e-06 5.2681590146389246 0.14489258137073968 TTIPEEEEEEEEAAGVVVEEELFHQQGT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 12 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR 30 0 P20700 P20700 LMNB1 Lamin-B1 1 TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR;TTIPEEEEEEEEAAGVVVEEELFHQQGT(1)PR 329.28 6.782199999999999e-66 7398424000.0 1555109.0 1632309.0 1253133.0 1178940.0 1184370.0 1334389.0 1075313.0 1416852.0 1882496.0 1434361.0 True False 1468844.0037370643 1553890.4254942397 1333911.9582636927 1290986.1031387653 1277573.1808565108 1326060.583284533 1184016.1320835482 1411937.271107742 1540682.1802623514 1421653.6774559706 1.0331939677218296 1.0930161474170734 0.938281931398869 0.9080876190950857 0.898652886505179 0.9327592256206165 0.832844279066846 0.9931654196079486 1.083725385931812 1.0 20.439138628747664 -4.769503339180479 24.907282668158246 0.9402878292250547 1.0631050612829542 0.32238306848064935 0.06565090274262621 169.07645150713745 522234.81279674155 0.017945942366299726 0.03843729049914842 1.700186881284992e-05 4.769503339180479 0.12281723205789952 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR ddPTM_KYSE-520_SHP099_60min_R1 1 TTIPEEEEEEEEAAGVVVEEELFHQQGTPR 30 0 P20700 P20700 LMNB1 Lamin-B1 0 60.382 0.0047006999999999995 0.0 18293.0 21336.0 13388.0 14470.0 12987.0 18055.0 13324.0 16693.0 20563.0 16550.0 False True 17278.25082380859 20310.986534011074 14251.011901557391 15845.22444943586 14009.00301407796 17942.3120478378 14670.919949708788 16635.095879175482 16829.277551046438 16403.379875705166 1.0533347977509917 1.2382196040032831 0.8687850924347842 0.9659731451384612 0.8540314935232655 1.0938179926206506 0.8943839660409071 1.014126113351402 1.0259640195233217 1.0 14.001705488754206 -4.76103665015399 24.999991176803086 0.9633420782478609 1.1457771994158954 0.4370300491557497 0.08222623326964516 8.715109715707825 540819.4047214913 0.02023142648547439 0.0472933712219577 1.7336576880380824e-05 4.76103665015399 0.1824351211680345 TTKS(ph)PSDSGYSYETIGK ddPTM_KYSE-520_SHP099_60min_R1 8 TTKSPSDSGYSYETIGK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.128)T(0.128)KS(0.743)PS(0.002)DSGYSYETIGK;T(0.002)T(0.002)KS(0.496)PS(0.496)DS(0.003)GYS(0.001)YETIGK;T(0.03)T(0.03)KS(0.94)PSDSGYSYETIGK;T(0.012)T(0.046)KS(0.918)PS(0.024)DSGYSYETIGK;T(0.028)T(0.028)KS(0.915)PS(0.028)DSGYSYETIGK;TTKS(0.999)PS(0.001)DSGYSYETIGK;TT(0.001)KS(0.974)PS(0.024)DSGYSYETIGK;T(0.002)T(0.032)KS(0.934)PS(0.032)DSGYSYETIGK 271.82 8.323499999999999e-30 34332050000.0 6997040.0 6771110.0 6533970.0 5923650.0 6385950.0 6203010.0 5983600.0 6904980.0 8750980.0 6061030.0 True False 6608900.242946576 6445815.711956685 6955160.1609216295 6486631.914989687 6888487.93391477 6164294.7137002675 6588480.682308424 6881028.23601444 7162022.626253769 6007333.989609982 1.1001386395990362 1.0729910677690107 1.1577781713070998 1.0797854632701755 1.1466796994854611 1.026128183377478 1.0967395343264696 1.1454379343508385 1.1922131578901531 1.0 22.518293444901428 -7.231972765331758 21.62721574821074 1.1266191473826572 1.0970801668315988 0.0 0.0572333270893345 426.83161535332687 313275.8472696339 0.025747980379869886 0.014859291181366191 5.8617492247357006e-08 7.231972765331758 -0.029538980551058414 TTKSPSDS(ph)GYSYETIGK ddPTM_KYSE-520_SHP099_60min_R1 1 TTKSPSDSGYSYETIGK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TTKS(0.001)PS(0.063)DS(0.485)GY(0.302)S(0.066)Y(0.083)ET(0.001)IGK 92.977 0.0023166999999999997 3604800000.0 639510.0 595670.0 604040.0 556450.0 566570.0 563080.0 569390.0 622720.0 814580.0 509880.0 True False 604035.1054684216 567053.119081101 642977.3848981723 609334.8406972071 611155.8356576692 559565.6088560796 626949.4979108896 620559.9296639399 666672.8058907463 505362.85988063744 1.195250291268119 1.122071216739264 1.2723083470163168 1.2057372812104297 1.2093406227003292 1.107255109701264 1.240592745693599 1.2279492201118836 1.3191962821490462 1.0 18.94696011609407 TTNESLLTS(ph)FPK ddPTM_KYSE-520_SHP099_60min_R1 4 TTNESLLTSFPK 12 0 Q8TDY2-2;Q8TDY2 Q8TDY2-2 RB1CC1 RB1-inducible coiled-coil protein 1 1 TTNESLLT(0.019)S(0.981)FPK;TTNESLLT(0.02)S(0.98)FPK;TTNESLLT(0.031)S(0.969)FPK;TTNESLLT(0.166)S(0.834)FPK 190.44 5.2092999999999995e-08 287980000.0 2299960.0 2117200.0 1779630.0 1671300.0 1720850.0 2164770.0 1714890.0 2243220.0 2423250.0 2153500.0 True False 2172376.63394341 2015486.5340180122 1894347.7973086783 1830139.8495053316 1856271.1047028631 2151258.8674493413 1888247.816913546 2235438.793391485 1983248.8851613698 2134421.66539765 1.0177823197548403 0.9442775842712973 0.8875227552357864 0.8574406262711779 0.8696834064214923 1.0078884141426452 0.8846648474034108 1.0473276342868338 0.929173891603974 1.0 21.02541378507621 -7.005868539643494 1.5024124680333288 0.987737025575892 0.9186037722480118 0.14974121750825142 0.06066273111011268 0.7707671886997268 3.356717420997083 0.04245770683414422 0.02024054768253104 9.865780762963623e-08 7.005868539643494 -0.06913325332788023 TTNNEKS(ph)PIIKPLIPK ddPTM_KYSE-520_SHP099_60min_R1 2 TTNNEKSPIIKPLIPK 16 2 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 TT(0.001)NNEKS(0.999)PIIKPLIPK;T(0.014)T(0.118)NNEKS(0.868)PIIKPLIPK 144.88 7.8111e-06 6661700000.0 8423800.0 6616300.0 6089200.0 6117000.0 6512500.0 6883700.0 6511100.0 7402400.0 7166800.0 6957900.0 True False 7956515.021571023 6298443.016731225 6481719.575064484 6698357.840856894 7024996.698943769 6840736.274921131 7169305.530212311 7376722.802133156 5865489.780325805 6896258.419164293 1.153743745950752 0.9133130799200078 0.9398893111447462 0.9713031956926896 1.0186678444969115 0.9919489466797141 1.0395935149833184 1.0696702985540218 0.8505321906188951 1.0 22.717382405970078 -8.840509323484625 0.002771868558795251 3.5937921088777163e-06 1.972285407586424 0.017078259176577015 0.07962347598995927 409260.4569839351 378.59350452354306 135905.66587726318 133471.23443990134 1.4437456094587908e-09 8.840509323484625 1.9722818137943152 TTNNEKS(ph)PIIKPLIPKPK ddPTM_KYSE-520_SHP099_60min_R1 2 TTNNEKSPIIKPLIPKPK 18 3 O75717;O75717-2 O75717 WDHD1 WD repeat and HMG-box DNA-binding protein 1 1 T(0.012)T(0.012)NNEKS(0.976)PIIKPLIPKPK;T(0.184)T(0.184)NNEKS(0.632)PIIKPLIPKPK 91.12799999999999 0.00081629 6174700000.0 1524520.0 1201840.0 1159770.0 1153880.0 1186630.0 1092890.0 1178960.0 1292560.0 1206410.0 1120240.0 True False 1439951.8365447263 1144101.802401382 1234530.6298976105 1263544.4082733276 1280011.0299988692 1086068.868123038 1298140.7823407894 1288076.4110457723 987356.3551212347 1110315.5451335316 1.296885234882982 1.0304294192907 1.1118736788911123 1.1380047895495944 1.1528353679358143 0.9781623547317104 1.169163836380107 1.1600994120017138 0.8892574362745599 1.0 20.08253830959828 -1.0000000019151303 0.11085112698620996 0.9426601202736025 1.6675499713538844 0.2796054186184589 0.09493078486113883 170.07694752488763 1.3172755178823172 0.8495726672697957 18.873387687641273 0.09999999955902496 1.0000000019151303 0.7248898510802819 TTNSS(ph)LEEIMDK ddPTM_KYSE-520_SHP099_60min_R1 4 TTNSSLEEIMDK 12 0 Q709C8-4;Q709C8-2;Q709C8-3;Q709C8 Q709C8-4 VPS13C Vacuolar protein sorting-associated protein 13C 1 TTNS(0.019)S(0.981)LEEIMDK;TTNS(0.089)S(0.911)LEEIMDK;T(0.028)T(0.028)NS(0.048)S(0.896)LEEIMDK;T(0.02)T(0.02)NS(0.041)S(0.918)LEEIMDK 134.14 4.6333000000000005e-05 1433300000.0 2368320.0 2186170.0 1621820.0 1544190.0 1674630.0 2087430.0 1691660.0 1939520.0 2470340.0 2137580.0 True False 2236944.5684711286 2081143.1116919287 1726365.1122037505 1690949.3533223483 1806413.853658688 2074401.5750771568 1862669.5018105947 1932792.2578073696 2021788.528203669 2118642.704212075 1.0558385158686066 0.9823001809386768 0.8148448574040176 0.798128608453219 0.852627887688356 0.9791181736085266 0.8791805707056788 0.9122785328383988 0.9542847995011853 1.0 21.014708876088424 -7.9594940012255995 2.3149270225765823 0.9995489782584202 0.903718288309338 0.12531683535775806 0.07568963714733884 0.6259997200916939 7.576462364352051 0.0788084325847199 0.02173892493600167 1.0977564531369414e-08 7.9594940012255995 -0.09583068994908217 TTPATGEQS(ph)PGAR ddPTM_KYSE-520_SHP099_60min_R1 2 TTPATGEQSPGAR 13 0 O00308-2;O00308;O00308-4 O00308-2 WWP2 NEDD4-like E3 ubiquitin-protein ligase WWP2 1 TTPATGEQS(1)PGAR;TTPAT(0.007)GEQS(0.992)PGAR 116.87 0.0010002000000000001 861540000.0 1143100.0 1166260.0 957400.0 796630.0 881540.0 1099630.0 870420.0 1014990.0 1270390.0 1028910.0 True False 1079689.9642866435 1110231.1190080505 1019115.5358941611 872341.4756844568 950912.1827235144 1092766.801282962 958410.5480805719 1011469.2365904466 1039719.1999257833 1019794.6578798658 1.0587327124573283 1.0886810500813962 0.999334060067429 0.855408948207317 0.9324545636475907 1.0715557223596406 0.9398073824715749 0.991836178759038 1.019537798018417 1.0 19.95984725497005 -4.875039718377621 5.081150644976214 0.9705392998689792 1.0726826108277603 0.3408260286542478 0.05494143649042357 0.2262748385390801 9.030017798287348 0.015260050963812437 0.033338707765316694 1.333399480611741e-05 4.875039718377621 0.10214331095878104 TTPDQELAPASEPVWERPWS(ph)VEEIRR ddPTM_KYSE-520_SHP099_60min_R1 3 TTPDQELAPASEPVWERPWSVEEIRR 26 2 Q641Q2;E7ESD2;Q641Q2-2;A0A087WYF6;Q5T1D7 Q641Q2 FAM21A WASH complex subunit FAM21A 1 TTPDQELAPAS(0.141)EPVWERPWS(0.859)VEEIRR;T(0.03)T(0.03)PDQELAPAS(0.025)EPVWERPWS(0.915)VEEIRR;T(0.001)T(0.001)PDQELAPAS(0.035)EPVWERPWS(0.963)VEEIRR 156.4 1.7623e-07 7032100000.0 341944.0 370411.0 313936.0 304005.0 337022.0 290563.0 259173.0 340911.0 427200.0 283131.0 True False 322975.6846715355 352615.8995617537 334172.81687536 332897.5437975635 363543.7140071292 288749.48853812774 285372.73612472776 339728.45931022544 349631.2488356287 280622.6796125849 1.1509250967078688 1.2565481166688288 1.1908261204572061 1.186281679931027 1.2954894255482892 1.028959914917648 1.016926844682335 1.2106236736789748 1.245912302306834 1.0 18.098272085113734 -6.261702363444388 24.99999830016102 1.1084261722638318 1.215214844783132 0.32225228322328203 0.08337120624603667 34.34265836388834 3264550.8202527747 0.029817513206162344 0.02794943654964226 5.473909797473619e-07 6.261702363444388 0.10678867251930013 TTPDQELVPASEPVWERPWS(ph)VEEIRR ddPTM_KYSE-520_SHP099_60min_R1 1 TTPDQELVPASEPVWERPWSVEEIRR 26 2 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;A0A0A0MT65 A0A0A0MR88 FAM21C WASH complex subunit FAM21C 1 T(0.053)T(0.044)PDQELVPAS(0.334)EPVWERPWS(0.568)VEEIRR 56.832 0.040684 1632300000.0 336690.0 316630.0 276930.0 240630.0 268990.0 320830.0 277650.0 304860.0 358970.0 304510.0 True False 318013.13452512486 301418.619528681 294781.3509036666 263499.40285195265 290157.98265625874 318827.5809641542 305717.57160287054 303802.51181485923 293790.09689729824 301812.2783051949 1.053678585612569 0.9986956833607814 0.9767043029494691 0.8730572670257636 0.9613856145469626 1.0563771055124314 1.0129394778754712 1.0065942761535094 0.9734199633860336 1.0 18.2032919731102 -6.205380911941662 24.99059630921599 1.0104705679866082 0.9688345131006292 0.13853646951054233 0.04581683394777884 598.3523930424242 266742.382973741 0.01643092351761557 0.016430904473858626 6.231880086276059e-07 6.205380911941662 -0.04163605488597899 TTPDVIFVFGFR ddPTM_KYSE-520_SHP099_60min_R1 1 TTPDVIFVFGFR 12 0 E7ETK0;A0A2R8Y849;A0A2R8YD14;P62847-2;P62847-3;P62847;P62847-4;A0A2R8Y8A0 E7ETK0 RPS24 40S ribosomal protein S24 0 126.39 0.00068568 34761000.0 45233.0 57348.0 64658.0 28100.0 51651.0 56096.0 43080.0 46976.0 74605.0 45671.0 False True 42723.83532025003 54592.915998897086 68825.95813645776 30770.61555142692 55715.63984601066 55745.884056245355 47434.94682028329 46813.05122028084 61058.61263900297 45266.39047150036 0.9438312813377263 1.2060364307878422 1.5204649060717679 0.679767377759003 1.2308390235154518 1.2315071618388231 1.04790654448466 1.0341679717041776 1.3488730160061109 1.0 15.466152650648542 -10.177029822477603 3.8795019142564837 0.999920862170161 1.1376726632492162 0.03459464528574241 0.21893306923698436 48164781.08136496 6.361021643286213 38003.708602170176 0.051312768801285664 6.652274742659911e-11 10.177029822477603 0.13775180107905527 TTPES(ph)PPYSSGSYDSIK ddPTM_KYSE-520_SHP099_60min_R1 2 TTPESPPYSSGSYDSIK 17 0 A0A087WTU5;A0A087X0N3;Q96MY1-2;Q96MY1 A0A087WTU5 NOL4L Nucleolar protein 4-like 1 TTPES(1)PPYSSGSYDSIK;T(0.001)T(0.034)PES(0.965)PPYSSGSYDSIK 280.35 5.6386e-35 0.0 675190.0 799620.0 524930.0 549300.0 467410.0 687700.0 571860.0 725380.0 790740.0 676200.0 True False 637735.8647421045 761205.0549459099 558767.8277176965 601505.3068469331 504192.5078008913 683407.8092106372 629669.189615766 722863.8260849642 647161.5489332514 670209.3940756388 0.951547188653895 1.1357719865979696 0.8337212707803896 0.8974886239494401 0.7522910186842127 1.0196929724525896 0.9395111366414278 1.078564150957548 0.9656109786790212 1.0 19.354252382840365 TTPPESAPQNGPS(ph)PMAALMSVADTLGTAHS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 TTPPESAPQNGPSPMAALMSVADTLGTAHSPK 32 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 2 TTPPES(0.001)APQNGPS(0.879)PMAALMS(0.087)VADT(0.052)LGT(0.099)AHS(0.883)PK;TTPPESAPQNGPS(0.999)PMAALMS(0.001)VADTLGTAHS(1)PK 135.49 1.6564e-06 116367000.0 61036.0 41268.0 50124.0 58595.0 48414.0 59046.0 49368.0 54260.0 77384.0 60620.0 True False 57650.21140775057 39285.42333546913 53355.073241235616 64163.85118277087 52223.90636202131 58677.47201199837 54358.59922524944 54071.784724379184 63333.01629189206 60082.95396164636 0.9595102704928803 0.653853060562681 0.8880234696066134 1.0679210483514099 0.8691967175142249 0.9766076423182327 0.904725810584296 0.8999521687781135 1.0540929184726897 1.0 15.874668123843955 -4.995725879823364 24.99771306306534 0.9586121506677034 0.7977457854243885 0.3284603449943524 0.09182293811034399 126.8102364843681 741641.5376177039 0.022357749772711516 0.04624729198040459 1.0098901124750211e-05 4.995725879823364 -0.160866365243315 TTPPESAPQNGPSPMAALMSVADTLGTAHS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 TTPPESAPQNGPSPMAALMSVADTLGTAHSPK 32 0 Q9H1B7 Q9H1B7 IRF2BPL Interferon regulatory factor 2-binding protein-like 1 TTPPESAPQNGPSPMAALMSVADT(0.002)LGT(0.011)AHS(0.987)PK;TTPPESAPQNGPSPMAALMS(0.009)VADT(0.068)LGT(0.313)AHS(0.61)PK;TTPPESAPQNGPSPMAALMSVADT(0.002)LGT(0.002)AHS(0.996)PK;TTPPESAPQNGPSPMAALMSVADT(0.051)LGT(0.005)AHS(0.945)PK 242.96 2.5226e-31 2007024000.0 416991.0 491987.0 363959.0 342042.0 377553.0 464139.0 303794.0 439191.0 543827.0 429101.0 True False 393859.6779790505 468351.20603245695 387420.37949498993 374549.5688413226 407264.2731172843 461242.1363373799 334504.46226372203 437667.5489289499 445081.72556304693 425299.49897552637 0.9260760450642218 1.10122679937464 0.9109354241616067 0.8806724901946708 0.9575940580657023 1.0845113559936779 0.7865150630778686 1.029080800666862 1.0465136371784414 1.0 18.698119629833243 TTPPPGAQCEVPAS(ph)PQRPSRPGALPEQTR ddPTM_KYSE-520_SHP099_60min_R1 4 TTPPPGAQCEVPASPQRPSRPGALPEQTR 29 2 D6R9H8;Q9H074 D6R9H8 PAIP1 Polyadenylate-binding protein-interacting protein 1 1 TTPPPGAQCEVPAS(0.999)PQRPS(0.001)RPGALPEQTR;TTPPPGAQCEVPAS(1)PQRPSRPGALPEQTR;TTPPPGAQCEVPAS(0.582)PQRPS(0.415)RPGALPEQT(0.003)R;TTPPPGAQCEVPAS(1)PQRPSRPGALPEQTR 207.53 1.6848e-17 2447750000.0 161823.0 153792.0 134737.0 103820.0 175253.0 129482.0 161202.0 169292.0 189535.0 164605.0 True False 152846.35560384704 146403.60147350177 143422.36260682245 113687.02158537894 189044.41404683175 128673.85480909093 177497.8713399098 168704.76556505 155120.221788532 163146.72776075228 0.9368643656033954 0.8973738148655755 0.8791004550035796 0.69683911621014 1.1587386191653033 0.7887001877094688 1.0879646424793934 1.0340677246830738 0.9508019187244087 1.0 17.315810525975213 -5.761597947093157 24.999999999998842 0.9985775717035605 0.8576434221298518 0.3202033367617987 0.10742774431118239 5.545936240886473 874436.4744147641 0.031690202301943395 0.03827311630314459 1.731418497273398e-06 5.761597947093157 -0.14093414957370876 TTPPPGAQCEVPAS(ph)PQRPSRPGALPEQTRPLR ddPTM_KYSE-520_SHP099_60min_R1 4 TTPPPGAQCEVPASPQRPSRPGALPEQTRPLR 32 3 D6R9H8;Q9H074 D6R9H8 PAIP1 Polyadenylate-binding protein-interacting protein 1 1 TTPPPGAQCEVPAS(0.935)PQRPS(0.037)RPGALPEQT(0.028)RPLR;TTPPPGAQCEVPAS(0.425)PQRPS(0.288)RPGALPEQT(0.288)RPLR;TTPPPGAQCEVPAS(0.999)PQRPS(0.001)RPGALPEQTRPLR;TTPPPGAQCEVPAS(0.998)PQRPS(0.001)RPGALPEQTRPLR 159.49 8.2962e-10 57749200000.0 684322.0 680944.0 578313.0 273026.0 591997.0 549766.3 469350.0 471698.0 709056.0 543374.0 True False 646361.2944979143 648230.4281222177 615591.9813135155 298974.30895173975 638583.7958978296 546335.004596246 516796.478414577 470061.78973314044 580309.3042471814 538560.1290985747 1.2001655146283736 1.2036361273293767 1.14303296522131 0.5551363585940787 1.1857242328106823 1.0144364112335695 0.9595891906806673 0.8728120860337644 1.077519988749418 1.0 19.038747902046655 -5.022789413880995 24.995041957752967 0.9510148471732914 1.194759381896686 0.32038142412075243 0.15509057945411037 827.1319265449663 907185.3983535321 0.04098609133580918 0.07167086677215448 9.488784557755994e-06 5.022789413880995 0.24374453472339452 TTPPPGAQCEVPASPQRPSRPGALPEQT(ph)RPLR ddPTM_KYSE-520_SHP099_60min_R1 1 TTPPPGAQCEVPASPQRPSRPGALPEQTRPLR 32 3 D6R9H8;Q9H074 D6R9H8 PAIP1 Polyadenylate-binding protein-interacting protein 1 1 TTPPPGAQCEVPAS(0.098)PQRPS(0.007)RPGALPEQT(0.895)RPLR 95.557 0.0012131 3700600000.0 0.0 58721.0 48338.0 74341.0 67089.0 56906.0 0.0 54279.0 87225.0 73499.0 True False 0.0 55899.95501798205 51453.944823534555 81406.3462885633 72368.52261580632 56550.82854579108 0.0 54090.71881781386 71387.13876331388 72847.85604135673 0.0 0.7673520959387861 0.7063206471625388 1.1174844492657108 0.9934200750495897 0.7762867930346007 0.0 0.7425162764859656 0.9799483834196359 1.0 16.15259889303323 -4.261533246772262 12.05422944600554 0.7683469973338032 2.0167236356282843e-08 0.390306828491759 0.29426658827564456 0.06739889505423338 961.8275530357046 0.07852312971130872 0.43718692260419295 5.4760417832862884e-05 4.261533246772262 -0.7683469771665669 TTPQQGASGPGRS(ph)PVGQAR ddPTM_KYSE-520_SHP099_60min_R1 8 TTPQQGASGPGRSPVGQAR 19 1 A0A2R8YFR7;A0A2R8YF49;H0Y895;Q12774 A0A2R8YFR7;Q12774 ARHGEF5 Rho guanine nucleotide exchange factor 5 1 TTPQQGASGPGRS(1)PVGQAR;TTPQQGASGPGRS(1)PVGQAR;TTPQQGASGPGRS(1)PVGQAR;TTPQQGASGPGRS(1)PVGQAR;TTPQQGASGPGRS(1)PVGQAR;TTPQQGAS(0.018)GPGRS(0.982)PVGQAR;TTPQQGASGPGRS(1)PVGQAR;TTPQQGAS(0.036)GPGRS(0.964)PVGQAR 241.15 2.6136e-26 6314910000.0 949574.0 877183.0 785857.0 646825.0 669744.0 825581.0 625937.0 714534.0 1046651.0 816953.0 True False 896899.2372911612 835041.8120014733 836514.5996356567 708299.0535249726 722449.0424779115 820428.2427452763 689212.8205164269 712055.4483274902 856605.5623245784 809715.4319998156 1.107672154742094 1.0312781243888451 1.0330970197389633 0.8747505920390238 0.8922258535861473 1.013230340341918 0.8511790602955729 0.8793897463073822 1.0579093944263291 1.0 19.627055447896346 -5.099821146873638 4.814036006671226 0.9311733500776169 1.0618342399414975 0.4026480589791832 0.06669727412534139 0.2114618493744471 7.820950545188699 0.018093053017831234 0.03274254961252782 7.946554259542832e-06 5.099821146873638 0.13066088986388058 TTPSYVAFTDTER ddPTM_KYSE-520_SHP099_60min_R1 2 TTPSYVAFTDTER 13 0 E9PKE3;P11142;E9PNE6;P11142-2;P54652;E9PLF4;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PN25;E9PI65;A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;P17066;P48741 E9PKE3;A0A0G2JIW1;P17066 HSPA8;HSPA2;HSPA1B;HSPA1A;HSPA6;HSPA7 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2;Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A;Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ; 124.6 0.00055831 958770000.0 535050.0 585300.0 467280.0 343290.0 534770.0 635670.0 543620.0 530420.0 608790.0 522440.0 False True 505369.70990426873 557181.3094467892 497401.6164744347 375916.17838609754 576853.3565749187 631702.5477401856 598574.4148199261 528580.096820959 498249.0823470093 517811.58805216925 0.9759721905902056 1.0760309778750132 0.9605841737638396 0.7259709652311299 1.114021721191765 1.2199467186828232 1.15596952372495 1.0207961911576704 0.9622208035576271 1.0 18.982067725959755 TTPVDLCLLEESVGS(ph)LEGSR ddPTM_KYSE-520_SHP099_60min_R1 4 TTPVDLCLLEESVGSLEGSR 20 0 Q9UKK3 Q9UKK3 PARP4 Poly [ADP-ribose] polymerase 4 1 TTPVDLCLLEES(0.079)VGS(0.461)LEGS(0.461)R;TTPVDLCLLEES(0.173)VGS(0.795)LEGS(0.032)R;TTPVDLCLLEES(0.249)VGS(0.618)LEGS(0.133)R;TTPVDLCLLEES(0.029)VGS(0.965)LEGS(0.006)R 130.56 1.786e-05 394290000.0 291350.0 351307.0 255084.0 252475.0 263729.0 308862.0 208849.0 321704.0 419019.0 334533.0 True False 275188.2347081743 334429.6843974421 271527.12278883083 276470.14809062355 284482.97188725375 306934.27769145806 229961.49508981794 320588.083910278 342935.71220940136 331569.2978827357 0.8299569244360455 1.0086268135589502 0.8189151544569738 0.8338231249275717 0.8579894872771523 0.9257017451598002 0.6935548513033531 0.9668810892848669 1.0342806598778804 1.0 18.33895089911432 -7.507062853008768 24.537133074401165 1.0116205724688265 0.8575427290736533 0.4498695562431594 0.07604503845238886 491.4394107500971 762437.4868974217 0.04270806266133878 0.01951940458903483 3.111266028409041e-08 7.507062853008768 -0.15407784339517328 TTQPSINES(ph)ESDPFEVVRDDFK ddPTM_KYSE-520_SHP099_60min_R1 4 TTQPSINESESDPFEVVRDDFK 22 1 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 T(0.001)T(0.001)QPS(0.144)INES(0.509)ES(0.346)DPFEVVRDDFK;TTQPS(0.001)INES(0.977)ES(0.022)DPFEVVRDDFK;TTQPS(0.061)INES(0.917)ES(0.021)DPFEVVRDDFK;TTQPS(0.002)INES(0.994)ES(0.004)DPFEVVRDDFK 152.88 2.3225e-07 209135000.0 214318.0 215047.0 210421.0 173953.0 193936.0 197323.0 177692.0 185900.0 265623.0 205069.0 True False 202429.35330765913 204715.81932787207 223985.0743455037 190485.4408191233 209197.65985510315 196091.4339637497 195654.84146680095 185255.15628938604 217392.55901092282 203252.24820126762 0.99595136141966 1.0072007623018033 1.102005396386591 0.9371873743334825 1.0292513942967467 0.9647688313369748 0.9626207985313725 0.9114544017537252 1.0695702553590107 1.0 17.63291178467503 -5.281749135405292 24.970997761410445 0.9788606114975825 1.032267352664556 0.18936598862582188 0.04976695155184809 1259.0605796714724 1548022.3357525202 0.013640728627024016 0.020256418504261606 5.2269803157565605e-06 5.281749135405292 0.053406741166973526 TTQPSINESES(ph)DPFEVVRDDFK ddPTM_KYSE-520_SHP099_60min_R1 3 TTQPSINESESDPFEVVRDDFK 22 1 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101;F5GWN9 Q76FK4-2 NOL8 Nucleolar protein 8 1 TTQPSINES(0.016)ES(0.984)DPFEVVRDDFK;T(0.002)T(0.002)QPS(0.036)INES(0.282)ES(0.677)DPFEVVRDDFK;TTQPS(0.012)INES(0.183)ES(0.804)DPFEVVRDDFK 155.8 1.1495e-07 572250000.0 417530.0 443560.0 399113.0 370887.0 378419.0 388268.0 354510.0 361588.0 495160.0 371967.0 True False 394368.77857457986 422250.711802866 424840.4625833783 406135.98896875733 408198.4223904185 385844.675391298 390347.33048418385 360333.7356232739 405251.42596781376 368671.66176594666 1.0697019040887041 1.145329993035739 1.1523545383129847 1.1016197638390637 1.1072139920793955 1.0465807801529745 1.0587939648369233 0.9773838702363672 1.099220439202322 1.0 18.491977001253776 -6.276074643228493 1.5540603246026856 1.0301239013565506 1.1232168722239686 0.5339167971333345 0.03708563540947293 0.29121298238171894 1.4011884534450365 0.015816237997268147 0.014191823482224976 5.295724171949035e-07 6.276074643228493 0.09309297086741797 TTQSMQDFPVVDS(ph)EEEAEEEFQK ddPTM_KYSE-520_SHP099_60min_R1 1 TTQSMQDFPVVDSEEEAEEEFQK 23 0 Q9UBB9 Q9UBB9 TFIP11 Tuftelin-interacting protein 11 1 T(0.001)T(0.001)QSMQDFPVVDS(0.999)EEEAEEEFQK 86.449 0.002075 98544000.0 145200.0 142370.0 134940.0 97505.0 130580.0 133180.0 119680.0 135710.0 156410.0 134620.0 True False 137145.46655097598 135530.3314982734 143638.44831163384 106771.84588405267 140855.9031014324 132348.7742193872 131778.42236424095 135239.25368495221 128009.8867752356 133427.37153277503 1.0278660590813455 1.0157610836617716 1.0765291009000395 0.8002244566275166 1.0556747201366599 0.9919162215293819 0.9876415974504225 1.0135795386760813 0.9593975007128978 1.0 17.02569512839499 TTRT(ph)PDTSTYCYETAEK ddPTM_KYSE-520_SHP099_60min_R1 1 TTRTPDTSTYCYETAEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.063)T(0.334)RT(0.603)PDTSTYCYETAEK 203.71 1.6863e-12 600690000.0 405740.0 483210.0 445370.0 298140.0 297320.0 413980.0 302550.0 349400.0 607990.0 378400.0 True False 383232.793377363 459995.86628700315 474079.26281719585 326475.13596094033 320717.39248060825 411396.19726191595 333134.7066034524 348188.0129505733 497594.3421806507 375047.67039074516 1.021824220313354 1.2264997295083964 1.264050680072947 0.8704897050041683 0.8551376739561329 1.096917084788984 0.8882463028136515 0.9283833508092771 1.3267495880249829 1.0 18.516714455286383 -5.256302046897104 24.99520565957742 0.9861023135782098 1.1763623614881382 0.2373954067953662 0.1435353513967532 593.1907632402015 2886105.7091636504 0.039408155966582495 0.06569740864969893 5.542401111578254e-06 5.256302046897104 0.19026004790992845 TTRT(ph)PEEGGYSYDISEK ddPTM_KYSE-520_SHP099_60min_R1 3 TTRTPEEGGYSYDISEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.004)T(0.004)RT(0.958)PEEGGYS(0.035)YDISEK;T(0.096)T(0.096)RT(0.799)PEEGGYS(0.005)YDIS(0.004)EK;T(0.005)T(0.005)RT(0.97)PEEGGYS(0.021)YDISEK 287.75 4.7523999999999993e-35 1139350000.0 1183130.0 1174360.0 953360.0 860330.0 923550.0 982660.0 876230.0 979800.0 1434920.0 953260.0 True False 1117499.4203888187 1117941.982849702 1014815.111029934 942095.504532353 996228.130719311 976526.8544407809 964807.8795807076 976401.3024870384 1174374.6993895615 944814.858025057 1.1827707946133739 1.1832392064478452 1.0740888571028595 0.9971218133694593 1.0544162406608666 1.0335642439853363 1.021160782332998 1.0334313587404906 1.2429680687329077 1.0 19.84967212696879 -4.799527394270928 4.514197305467597 1.0526876230260844 1.185010718803519 0.3682347724774956 0.06624961373406628 0.19192525699661023 8.644437442344435 0.017321532199377786 0.04109241170446533 1.5866188356235696e-05 4.799527394270928 0.13232309577743462 TTRTPEEGGYSYDIS(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 1 TTRTPEEGGYSYDISEK 17 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 TTRT(0.47)PEEGGYS(0.033)YDIS(0.497)EK 232.62 6.3921e-23 614540000.0 856770.0 903910.0 854570.0 716020.0 754980.0 838650.0 719770.0 834630.0 1061000.0 850130.0 True False 809243.260171349 860484.8068034295 909656.9495603441 784070.325520738 814392.6307514112 833415.6742685778 792531.375878258 831734.8633341071 868349.1456334314 842598.5095911312 0.9604138281279803 1.0212275443271048 1.0795852819651353 0.9305384671297439 0.9665251261203787 0.9891017664783085 0.9405800827523797 0.9871069719049281 1.0305609798132631 1.0 19.684485838464933 -3.8152716646008904 8.032736258294785 0.9915080887575162 0.01297315069358642 0.052754166568275807 0.04147103146892966 37077.57937702444 35121.32716046356 0.01081983213420244 635591.5681170349 0.00015301300187112052 3.8152716646008904 -0.9785349380639298 TTS(ph)FAESCKPVQQPSAFGSMK ddPTM_KYSE-520_SHP099_60min_R1 4 TTSFAESCKPVQQPSAFGSMK 21 1 A0A3B3ITW1;P49841;P49841-2 A0A3B3ITW1 GSK3B Glycogen synthase kinase-3 beta 1 T(0.387)T(0.101)S(0.512)FAESCKPVQQPSAFGSMK;T(0.205)T(0.113)S(0.683)FAESCKPVQQPSAFGSMK;TTS(1)FAESCKPVQQPSAFGSMK;TT(0.001)S(0.999)FAESCKPVQQPSAFGSMK 331.54 3.5008999999999995e-65 16011960000.0 7215400.0 6969400.0 6233000.0 6869000.0 6555200.0 7528100.0 6893000.0 8411100.0 8966800.0 9089000.0 True False 6815147.378456706 6634579.562717332 6634789.153152605 7521827.694759838 7071056.946014002 7481114.335493099 7589811.709197144 8381923.8572655 7338655.154633223 9008478.531135004 0.7565259055568895 0.736481697745848 0.7365049636541309 0.8349720398137134 0.7849335402837553 0.830452590816191 0.8425187097871545 0.93044833578678 0.8146386905701606 1.0 23.1028520348594 -5.912346762028173 0.04136254248112698 1.6104524271185425 6.141782616069912e-10 0.7887850509345646 0.03682910313407593 71.81122770866156 0.9421511645360074 15.67460616777866 20.887176451700206 1.223638795846558e-06 5.912346762028173 -1.6104524265043643 TTS(ph)FFSR ddPTM_KYSE-520_SHP099_60min_R1 1 TTSFFSR 7 0 Q9BZ67-2;Q9BZ67-3;Q9BZ67 Q9BZ67-2 FRMD8 FERM domain-containing protein 8 1 T(0.009)T(0.036)S(0.955)FFSR 102.62 0.004610800000000001 361080000.0 432500.0 531610.0 522720.0 720280.0 653680.0 439640.0 548920.0 606500.0 640000.0 669330.0 True False 408508.36283262464 506070.6576371225 556415.3675815709 788735.1946399222 705120.8970695687 436896.04368382256 604410.1905429407 604396.1930581646 523792.13308708475 663400.256930861 0.6157796271025547 0.7628436262270919 0.8387325174635257 1.188928081350025 1.0628890925242072 0.6585708086775062 0.9110792228799691 0.9110581232728617 0.7895567232824782 1.0 19.33952004530982 -4.618509424191659 2.3884600759152614 0.9243084439024212 0.6306573381383963 0.34153378799772816 0.13754190461040292 0.4000336788607546 4.190220793522179 0.03980535925130378 0.17683635303732245 2.4070802848334788e-05 4.618509424191659 -0.29365110576402487 TTS(ph)GDDACNLTSFR ddPTM_KYSE-520_SHP099_60min_R1 4 TTSGDDACNLTSFR 14 0 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0U1RQT6 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 T(0.031)T(0.031)S(0.937)GDDACNLTSFR;T(0.07)T(0.07)S(0.86)GDDACNLTSFR;TTS(1)GDDACNLTSFR;TT(0.006)S(0.994)GDDACNLTSFR 237.05 2.8443e-17 1170400000.0 1792830.0 1435310.0 1343640.0 1546640.0 1679860.0 1847300.0 1675660.0 1954650.0 1781480.0 1734140.0 True False 1693378.1459820007 1366355.553155767 1430253.1843000117 1693632.200585728 1812055.4249040596 1835770.315478859 1845052.0656656432 1947869.7753687399 1458008.1394562186 1718776.868740506 0.9852227923121184 0.7949580762958557 0.8321342987051483 0.985370603589049 1.0542703115570242 1.0680678503801857 1.073468056978024 1.133288334742432 0.8482823838120565 1.0 20.712950835922694 -5.425630527000758 3.869399436377768 1.0393621260977737 0.8641792351452521 0.4145984154457485 0.083588240158234 0.20600551905510173 5.550744693626666 0.0238417702651771 0.03596895325327482 3.7529214364436224e-06 5.425630527000758 -0.1751828909525216 TTS(ph)GDDACNLTSFRPATLTVTNFFK ddPTM_KYSE-520_SHP099_60min_R1 2 TTSGDDACNLTSFRPATLTVTNFFK 25 1 Q96N67-2;Q96N67-6;Q96N67;Q96N67-4;Q96N67-3;Q96N67-5;A0A1B0GUE9;Q96N67-7;A0A0U1RQT6 Q96N67-2 DOCK7 Dedicator of cytokinesis protein 7 1 T(0.002)T(0.002)S(0.997)GDDACNLTSFRPATLTVTNFFK;TT(0.017)S(0.983)GDDACNLTSFRPATLTVTNFFK 223.75 1.1324e-21 5370800000.0 494610.0 638320.0 541860.0 490020.0 541560.0 611840.0 450770.0 553000.0 680800.0 411310.0 True False 467172.9973194101 607654.1490621469 576789.1626066542 536591.3534701149 584177.6909451033 608021.279609475 496338.2306912515 551081.7720711705 557183.8815713864 407666.11339433776 1.1459696599003582 1.49056821034904 1.4148567753256518 1.3162520401862958 1.4329807451521606 1.4914687771002753 1.2175116213575021 1.3517968601381052 1.366765260257036 1.0 18.63702851448683 -10.238202795695079 0.5042994586403442 0.8459801488916825 1.3735136927263065 0.5077152435353371 0.1056135436235278 22.35779268598982 3.022151398989095 4.832495319722965 0.04964663536495541 5.778261659609549e-11 10.238202795695079 0.527533543834624 TTS(ph)ISPALAR ddPTM_KYSE-520_SHP099_60min_R1 1 TTSISPALAR 10 0 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4;Q9UKE5-5;Q9UKE5-8;Q9UKE5-3;Q9UKE5-7 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 1 TT(0.002)S(0.604)IS(0.394)PALAR 128.51 0.00038696 1950300000.0 2485400.0 2879700.0 2402700.0 1724700.0 1896300.0 2748400.0 1820700.0 2648200.0 2594800.0 3166300.0 True False 2347529.907477934 2741354.8894821783 2557581.8864559243 1888614.969450038 2045528.0215289162 2731246.2161327843 2004754.1243196328 2639014.0122945253 2123649.7295849486 3138249.0453441264 0.748038117293688 0.873530064017457 0.814970975694337 0.6018053195147044 0.6518055106441091 0.8703089451058171 0.638812948033511 0.8409192432352489 0.6766989167846871 1.0 21.581528415647398 -10.155231311818204 5.439030014205961 1.000006399252431 0.7483183272729589 0.3875304246825648 0.09564456430515156 7.4609432313714526e-06 1.1587159873935178e-06 0.09309461555137638 0.022578186938747892 6.994693488040749e-11 10.155231311818204 -0.2516880719794722 TTS(ph)PEPR ddPTM_KYSE-520_SHP099_60min_R1 2 TTSPEPR 7 0 Q96JM3 Q96JM3 CHAMP1 Chromosome alignment-maintaining phosphoprotein 1 1 T(0.04)T(0.04)S(0.919)PEPR;T(0.008)T(0.003)S(0.988)PEPR 126.24 0.0031343000000000005 1098580000.0 2491400.0 1846460.0 1813810.0 2006160.0 2091600.0 2543500.0 2922800.0 1663660.0 2402900.0 2528200.0 True False 2353197.075517231 1757753.290007037 1930731.0947986103 2196824.8432260044 2256197.0204239194 2527625.0730365776 3218265.1477791136 1657889.1517611626 1966593.9321796177 2505802.114909834 0.9390993253279721 0.7014733045152235 0.7705042163188067 0.8766952626285306 0.9003891436595358 1.0087089710703387 1.2843253378349535 0.661620142267626 0.7848161355113156 1.0 21.25684105776266 -5.598063885679468 2.4384172169390297 0.9455783175772329 0.7953802853159216 0.12498537447702995 0.16130166472201046 0.632512542721085 7.621839044240824 0.05470420202220871 0.07746180490182156 2.5231095901755157e-06 5.598063885679468 -0.15019803226131123 TTS(ph)PGGRPSAR ddPTM_KYSE-520_SHP099_60min_R1 4 TTSPGGRPSAR 11 1 A1L390-3;A1L390;A1L390-2;G3V311 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 T(0.025)T(0.167)S(0.782)PGGRPS(0.026)AR;T(0.015)T(0.011)S(0.957)PGGRPS(0.017)AR;T(0.058)T(0.042)S(0.615)PGGRPS(0.285)AR;T(0.009)T(0.192)S(0.453)PGGRPS(0.346)AR 104.17 0.0031369 33270400000.0 3871290.0 3378080.0 3152020.0 3145720.0 3387340.0 3516390.0 3618440.0 3837350.0 4701460.0 3800930.0 True False 3656541.8264747113 3215791.9661985426 3355204.2526103137 3444688.2830047957 3653904.38667181 3494442.9056713628 3984227.227771258 3824039.128494226 3847793.3781618774 3767256.717278797 0.9706112699205541 0.8536163600025128 0.8906226743777309 0.9143757756686668 0.9699111743335439 0.9275828986232465 1.0575937682975811 1.0150726152945702 1.021378065506843 1.0 21.84508291748222 -6.324760337728305 1.2214387346996627 1.0239344210084695 0.9023178507919761 0.6217176995503709 0.037591196068017446 0.2823011512399966 0.8619434375878697 0.019002230363752624 0.01618301510576479 4.7341243612255836e-07 6.324760337728305 -0.12161657021649341 TTS(ph)PPEVSGYSYEK ddPTM_KYSE-520_SHP099_60min_R1 12 TTSPPEVSGYSYEK 14 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 T(0.005)T(0.187)S(0.808)PPEVSGYSYEK;TT(0.001)S(0.999)PPEVSGYSYEK;TT(0.02)S(0.98)PPEVSGYSYEK;TT(0.026)S(0.973)PPEVSGYSYEK;T(0.089)T(0.12)S(0.791)PPEVSGYSYEK;T(0.034)T(0.034)S(0.932)PPEVSGYSYEK;T(0.258)T(0.037)S(0.705)PPEVSGYSYEK;TT(0.007)S(0.993)PPEVSGYSYEK;TT(0.001)S(0.999)PPEVSGYSYEK;TT(0.013)S(0.986)PPEVSGYSYEK;TT(0.008)S(0.992)PPEVSGYSYEK;TT(0.003)S(0.997)PPEVSGYSYEK 207.64 5.641e-13 56705300000.0 26504750.0 26513600.0 21502100.0 20358970.0 21339640.0 26100940.0 21813470.0 26928640.0 31657210.0 24800230.0 True False 25034478.681590814 25239846.858275045 22888159.770576425 22293880.387652487 23018948.26205734 25938034.351807896 24018588.426551633 26835230.833031856 25909058.677321546 24580519.25648696 1.018468260184701 1.0268231763091857 0.9311503769203773 0.9069735327812078 0.9364711958223784 1.055227274947118 0.9771391798492203 1.0917275812206393 1.0540484685035274 1.0 24.551012056766947 -6.265395680427107 24.86878987640574 1.0377058938564048 0.962478150135657 0.3833123746504179 0.045383050756904554 374.0928272050426 2351489.694666581 0.017102689591277902 0.015641827915263553 5.427556081166976e-07 6.265395680427107 -0.07522774372074781 TTSAT(ph)PLKDNTQQFR ddPTM_KYSE-520_SHP099_60min_R1 3 TTSATPLKDNTQQFR 15 1 Q14207 Q14207 NPAT Protein NPAT 1 TTS(0.006)AT(0.994)PLKDNTQQFR;TT(0.012)S(0.035)AT(0.952)PLKDNTQQFR;T(0.11)T(0.11)S(0.11)AT(0.67)PLKDNTQQFR 195.89 1.0167000000000001e-10 2337750000.0 1733360.0 2008180.0 1534670.0 1371710.0 1301200.0 1724300.0 1350610.0 1669720.0 2033410.0 1823810.0 True False 1637207.0654325066 1911704.0184603669 1633597.283758821 1502076.9059803511 1403597.0371847406 1713538.0041033933 1487142.8394833512 1663928.131035576 1664194.0020947007 1807652.4623027083 0.9057089786755376 1.0575617041038468 0.9037120341582894 0.8309544767620349 0.7764750506282303 0.9479355350865256 0.8226928961714961 0.9204911705848332 0.9206382514339838 1.0 20.785685902438 -4.965261586671529 14.440978968405126 0.8792239821529687 0.981415269858088 0.20444378272686003 0.07095000125058301 2.8115281046958684 1165.3208060835996 0.017897179206695563 0.0372439121213298 1.0832742337072096e-05 4.965261586671529 0.10219128770511932 TTSFFLNS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 1 TTSFFLNSPEK 11 0 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 TTSFFLNS(1)PEK 102.73 0.0012460000000000001 393360000.0 759060.0 636670.0 608550.0 596650.0 648040.0 763220.0 694690.0 721760.0 791800.0 792090.0 True False 716953.4286514035 606083.4175388464 647778.1067144272 653355.4366106362 699037.0611567778 758456.4608779155 764916.0447210458 719256.3830200501 648029.0796536778 785072.6988366947 0.9132318952292839 0.772009290906344 0.8251186261785591 0.8322228471054534 0.8904106106257385 0.9660971041303326 0.9743251113616399 0.9161653233972218 0.8254383073235313 1.0 19.582466730218027 -5.917453800830554 3.3525174732996597 0.9334196601383589 0.8301104221833736 0.42965116930033354 0.05437610037221156 0.23634501790520313 5.315061477302174 0.017961342742865805 0.020476638460662493 1.2093338220324133e-06 5.917453800830554 -0.10330923795498526 TTSFFLNS(ph)PEKEHQEMDEGSQSLEK ddPTM_KYSE-520_SHP099_60min_R1 5 TTSFFLNSPEKEHQEMDEGSQSLEK 25 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 TTSFFLNS(0.999)PEKEHQEMDEGSQSLEK;TTSFFLNS(1)PEKEHQEMDEGSQSLEK;TTSFFLNS(1)PEKEHQEMDEGSQSLEK;T(0.002)T(0.002)S(0.002)FFLNS(0.995)PEKEHQEMDEGSQSLEK;TTSFFLNS(1)PEKEHQEMDEGSQSLEK 442.62 6.542399999999999e-132 6883510000.0 2758650.0 2400080.0 2263000.0 2507910.0 2162290.0 2427360.0 2537520.0 2448900.0 3105750.0 2430970.0 True False 2605622.185267563 2284776.554206473 2408876.600928025 2746261.0123693654 2332449.921252838 2412209.945856527 2794037.2854086636 2440405.3374775574 2541824.0895862672 2409433.497066042 1.0814252347866913 0.9482629659580298 0.999768868433723 1.1397953152529328 0.9680490970566539 1.0011523243093723 1.1596241559731582 1.0128544076643866 1.0549467717957093 1.0 21.200262551029972 TTSIS(ph)PALAR ddPTM_KYSE-520_SHP099_60min_R1 8 TTSISPALAR 10 0 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4;Q9UKE5-5;Q9UKE5-8;Q9UKE5-3;Q9UKE5-7 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 1 T(0.002)T(0.009)S(0.114)IS(0.875)PALAR;TT(0.015)S(0.22)IS(0.765)PALAR;TTSIS(1)PALAR;TTSIS(1)PALAR;TTSIS(1)PALAR;TTSIS(1)PALAR;TTS(0.001)IS(0.999)PALAR;TTSIS(0.999)PALAR 264.21 8.525e-20 30468670000.0 22244200.0 24350500.0 19490400.0 17102800.0 17744700.0 23744300.0 18360300.0 22926000.0 26838700.0 24501400.0 True False 21010269.883286647 23180665.429154348 20746782.369742583 18728244.969855703 19141106.936467957 23596103.016199134 20216338.30326018 22846475.05696861 21965468.628569268 24284336.657800764 0.865177837852845 0.9545521360456066 0.8543277365197527 0.7712067755344555 0.7882079385651793 0.9716593600517167 0.8324846829516409 0.9407905753781306 0.9045117821455249 1.0 24.533522742972938 -7.945817848069345 0.7394940547636282 0.9974381361119586 0.8590061669679449 0.31830411358069965 0.061435393942919296 0.904254081518075 1.1418319613744359 0.06328468041858736 0.024762587430473527 1.132875414574612e-08 7.945817848069345 -0.1384319691440138 TTSRS(ph)PVLSR ddPTM_KYSE-520_SHP099_60min_R1 7 TTSRSPVLSR 10 1 O95819-3;E7EX83;G5E948;C9J840;H7C360;E7ENQ1;H7C0P6;G3XAA2;A0A0D9SG62;A0A0D9SEY1;O95819-4;O95819-2;O95819;O95819-5;O95819-6;E7EN19;H7C3Z6 O95819-3 MAP4K4 Mitogen-activated protein kinase kinase kinase kinase 4 1 T(0.005)T(0.013)S(0.013)RS(0.963)PVLS(0.007)R;T(0.004)T(0.004)S(0.004)RS(0.987)PVLSR;TTS(0.002)RS(0.998)PVLSR;T(0.005)T(0.014)S(0.168)RS(0.813)PVLSR;T(0.026)T(0.026)S(0.242)RS(0.707)PVLSR;TT(0.001)SRS(0.999)PVLSR;T(0.011)T(0.073)S(0.073)RS(0.843)PVLSR 143.21 0.00014238 59293050000.0 8489510.0 8523930.0 7931500.0 7073910.0 8016410.0 7866780.0 7758850.0 7424750.0 10381620.0 7450160.0 True False 8018579.956881382 8114427.6081202235 8442777.180848695 7746212.2795514 8647255.859866383 7817680.507986128 8543190.277078819 7398995.275199678 8496579.50734302 7384157.37853678 1.0859167195147614 1.098896894005278 1.1433636565478629 1.0490313088487238 1.1710551951399353 1.0587098983980827 1.1569621067274312 1.0020094231341854 1.1506498401618133 1.0 22.816001870793098 -13.99992906989723 0.2894898760389895 0.21342481930010623 1.106746336362718 0.2516324765696476 0.052011588276450846 323.60691399968124 3.0588048090296653 153.54829611882374 0.05112877960100134 1.0001633359351461e-14 13.99992906989723 0.8933215170626116 TTT(ph)PPDSGVLFEGLGISTRPR ddPTM_KYSE-520_SHP099_60min_R1 1 TTTPPDSGVLFEGLGISTRPR 21 1 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 T(0.09)T(0.244)T(0.665)PPDS(0.001)GVLFEGLGISTRPR 98.06700000000001 0.0037474000000000006 163790000.0 125400.0 160180.0 118730.0 133110.0 99570.0 129080.0 109890.0 162070.0 174140.0 126060.0 True False 118443.81202129749 152484.71236491812 126383.52577471684 145760.73437901933 107405.59252419685 128274.36384020511 120998.75362304854 161507.81699742234 142520.565712164 124943.20647319604 0.9479812097403402 1.2204322001102998 1.0115277920438979 1.166615924894558 0.8596353139635365 1.0266613724830544 0.9684300334408842 1.2926498491302165 1.1406827928874934 1.0 16.93091293445383 -7.242240286972392 24.963525460459522 1.1624997732754223 1.0341816996327493 0.16241570861314714 0.11783008624279989 1239.485137383845 1611637.0075000392 0.05421600368644616 0.03123688304335156 5.724792013660842e-08 7.242240286972392 -0.128318073642673 TTTS(ph)PFFSEDTFR ddPTM_KYSE-520_SHP099_60min_R1 2 TTTSPFFSEDTFR 13 0 H0Y9K9;G5E9Z1;A0A590UJE4;A0A494C0H4;H0Y9M2;Q17R98-3;Q17R98-2;Q17R98;A0A5F9ZGT0;A0A5F9ZHK5 H0Y9K9 ZNF827 Zinc finger protein 827 1 T(0.001)T(0.001)T(0.033)S(0.964)PFFSEDTFR;T(0.005)T(0.003)T(0.028)S(0.964)PFFSEDTFR 141.73 1.1225e-05 1037860000.0 923700.0 871940.0 774540.0 737630.0 771430.0 848050.0 730400.0 840110.0 995820.0 825200.0 True False 872460.5196497017 830050.6935913777 824468.0877078177 807734.1334234542 832137.1521637139 842757.0053818247 804235.9600170599 837195.8544931475 815004.190579344 817889.3699958854 1.0667219206603586 1.014869154731224 1.0080435300338546 0.9875836061147459 1.0174201825949887 1.0304046443176837 0.9833065320571484 1.023605251768169 0.9964724087115158 1.0 19.641546187833473 -4.248411304917606 2.9883698373301018 1.006630642120308 1.0776608886409416 0.6190099119793528 0.014234995681959583 0.2661949511637299 3.4085856044621856 0.0035500526621187185 0.04590608975745512 5.6440219629293723e-05 4.248411304917606 0.07103024652063361 TTYDS(ph)AEEENKENLYAGK ddPTM_KYSE-520_SHP099_60min_R1 7 TTYDSAEEENKENLYAGK 18 1 E7ESG2;Q9HAW4-2;Q9HAW4-3;Q9HAW4 E7ESG2 CLSPN Claspin 1 TTYDS(1)AEEENKENLYAGK;T(0.002)T(0.002)Y(0.006)DS(0.991)AEEENKENLYAGK;TTYDS(1)AEEENKENLYAGK;TTYDS(1)AEEENKENLYAGK;TTYDS(1)AEEENKENLYAGK;TTYDS(1)AEEENKENLYAGK;T(0.062)T(0.062)Y(0.002)DS(0.874)AEEENKENLYAGK 200.23 4.8627e-13 6194490000.0 6791010.0 5843370.0 5308650.0 6104270.0 5846460.0 5882570.0 6137070.0 6597150.0 7387490.0 6296520.0 True False 6414299.137757192 5562645.73412281 5650854.073140315 6684417.98548431 6306543.140192985 5845854.698601453 6757464.927631285 6574266.02643638 6046108.039467976 6240737.731418433 1.027811039945643 0.8913442566442378 0.9054785373677215 1.071094199621979 1.0105444919505686 0.9367249434583708 1.0827990565300374 1.0534437288301397 0.9688130313551536 1.0 22.573285152666266 -5.252274014243861 24.875266071562265 1.018907107940658 0.936524574888863 0.29369683468182173 0.053877202204973995 742.3187813150357 2014685.5666120383 0.01474259249261383 0.02507620290890066 5.594045388035067e-06 5.252274014243861 -0.08238253305179499 TVAISDAAQLPHDYCT(ph)TPGGTLFS(ph)TTPGGTR ddPTM_KYSE-520_SHP099_60min_R1 2 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR 31 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 TVAISDAAQLPHDYCT(0.859)T(0.141)PGGT(0.23)LFS(0.592)T(0.095)T(0.082)PGGTR;TVAISDAAQLPHDYCT(0.534)T(0.466)PGGT(0.058)LFS(0.699)T(0.057)T(0.185)PGGT(0.002)R 159.2 8.1241e-10 1903490000.0 746050.0 870880.0 890860.0 945730.0 684110.0 843650.0 680330.0 854050.0 1099730.0 852950.0 True False 704665.1192861956 829041.6175824704 948286.2610263973 1035611.8948559078 737945.5649465523 838384.4674139225 749104.3957809497 851087.4998867689 900046.7539372791 845393.526585058 0.8335350308780686 0.9806576363688984 1.1217098678966368 1.2250057071518294 0.8729018400785034 0.9917091165821339 0.8861014098451104 1.0067352932364073 1.0646482680947313 1.0 19.689263539727932 TVAISDAAQLPHDYCT(ph)TPGGTLFSTT(ph)PGGTR ddPTM_KYSE-520_SHP099_60min_R1 2 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR 31 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 TVAISDAAQLPHDY(0.132)CT(0.431)T(0.431)PGGT(0.027)LFS(0.11)T(0.078)T(0.785)PGGT(0.006)R;TVAISDAAQLPHDYCT(0.537)T(0.462)PGGT(0.001)LFS(0.284)T(0.133)T(0.581)PGGTR 195.38 3.6654e-15 15963000000.0 3770320.0 3959140.0 3151790.0 3259230.0 3861250.0 2853090.0 3230810.0 3858640.0 4598680.0 3200820.0 True False 3561172.833653415 3768936.971609705 3354959.4264423023 3568986.239276771 4165108.4074927606 2835282.80701 3557411.8044670294 3845255.278453342 3763675.6352889263 3172463.2250002767 1.1225261196378737 1.1880159687617424 1.0575250801975835 1.1249890025995368 1.3128941494640642 0.8937165243293728 1.1213405963017016 1.2120724515106103 1.1863575298933837 1.0 21.597172009854784 TVAISDAAQLPHDYCTT(ph)PGGT(ph)LFSTTPGGTR ddPTM_KYSE-520_SHP099_60min_R1 2 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR 31 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 TVAISDAAQLPHDY(0.005)CT(0.133)T(0.862)PGGT(0.387)LFS(0.199)T(0.104)T(0.31)PGGTR;TVAISDAAQLPHDY(0.015)CT(0.474)T(0.507)PGGT(0.392)LFS(0.216)T(0.203)T(0.19)PGGT(0.003)R 121.15 0.00039813 20804100000.0 1058640.0 1282120.0 974210.0 1155370.0 1121520.0 1085580.0 986930.0 1097280.0 1293810.0 1258210.0 True False 999915.1288534813 1220525.0306986466 1037009.1353911115 1265176.017425342 1209777.2434240952 1078804.4925445453 1086698.5159085921 1093473.7917870763 1058886.7182959372 1247063.2382725687 0.8018158968734923 0.9787194371869362 0.8315609854938679 1.0145243469592313 0.9701009590338643 0.8650760117336991 0.8714061023993349 0.8768390874080737 0.8491042681706394 1.0 20.2501031950603 -6.293806073756606 24.572100482428233 0.8834701007423437 0.9230538987242326 0.0248924751990246 0.07213640664888499 1629.8602121796503 1237348.5088163505 0.024529125432605856 0.021634222163085342 5.083864025173553e-07 6.293806073756606 0.039583797981888935 TVAISDAAQLPHDYCTT(ph)PGGTLFSTT(ph)PGGTR ddPTM_KYSE-520_SHP099_60min_R1 8 TVAISDAAQLPHDYCTTPGGTLFSTTPGGTR 31 0 Q13542 Q13542 EIF4EBP2 Eukaryotic translation initiation factor 4E-binding protein 2 2 TVAISDAAQLPHDY(0.067)CT(0.25)T(0.653)PGGT(0.311)LFS(0.064)T(0.068)T(0.539)PGGT(0.048)R;TVAISDAAQLPHDYCT(0.041)T(0.959)PGGT(0.07)LFS(0.18)T(0.174)T(0.52)PGGT(0.056)R;TVAISDAAQLPHDYCT(0.161)T(0.838)PGGT(0.001)LFS(0.09)T(0.056)T(0.836)PGGT(0.016)R;TVAISDAAQLPHDY(0.001)CT(0.264)T(0.732)PGGT(0.278)LFS(0.055)T(0.223)T(0.447)PGGTR;TVAISDAAQLPHDY(0.005)CT(0.189)T(0.805)PGGTLFS(0.09)T(0.216)T(0.694)PGGT(0.001)R;TVAISDAAQLPHDY(0.001)CT(0.155)T(0.844)PGGTLFS(0.003)T(0.04)T(0.957)PGGTR;TVAISDAAQLPHDYCT(0.232)T(0.767)PGGT(0.001)LFS(0.006)T(0.072)T(0.903)PGGT(0.019)R;TVAISDAAQLPHDYCT(0.18)T(0.82)PGGTLFS(0.002)T(0.082)T(0.915)PGGT(0.002)R 214.42 5.4215e-22 21496430000.0 4579144.0 4946254.0 4260106.0 4688440.0 4680587.0 4773078.0 4180068.0 4537246.0 5645011.0 4676982.0 True False 4325129.7540227445 4708628.533361379 4534719.249170603 5134027.927969119 5048922.56800294 4743287.449718612 4602630.066972336 4521507.352627182 4620019.301546957 4635547.578116938 0.9330353493598934 1.0157653338711128 0.9782488848949981 1.107534296963181 1.0891750074656605 1.0232421024239473 0.9928988947713544 0.9753987584922856 0.99665017426565 1.0 22.144308337856305 -9.90507579449615 13.709295130854157 1.0000058053301217 1.015238490867919 0.0027842838214400256 0.04960527640485468 0.0 0.0 0.05198208146632662 0.01260750661912511 1.244297433954948e-10 9.90507579449615 0.01523268553779733 TVALWDLR ddPTM_KYSE-520_SHP099_60min_R1 2 TVALWDLR 8 0 E9PC52;Q16576;Q16576-2;Q5JP02;Q09028-4;Q09028-3;Q09028-2;Q09028;H0YF10;H0YCT5;H0YDK2;H0YEU5 E9PC52;Q09028-4 RBBP7;RBBP4 Histone-binding protein RBBP7;Histone-binding protein RBBP4 0 ; 157.86 0.0019344999999999998 1322610000.0 2346140.0 2465100.0 1667610.0 1514950.0 2585800.0 2400330.0 1949220.0 1970450.0 2011180.0 2045590.0 False True 2215994.93728586 2346672.8958094614 1775106.8088703412 1658930.3925136724 2789287.748810566 2385348.650112793 2146266.1801539613 1963614.9688564888 1646000.409722004 2027467.6640449367 1.0929865746242278 1.1574403564729059 0.8755290357276928 0.8182277931890627 1.3757495610291244 1.1765162485274163 1.0585945306136293 0.9685061831955153 0.8118503880047688 1.0 20.951247474497166 -7.368195282505142 3.354519113828623 0.9029990794095109 1.080101542229942 0.17980521955595663 0.1523236196602042 0.46989547104914975 9.810503008378024 0.10452122182667532 0.04445642467766841 4.283558649076936e-08 7.368195282505142 0.17710246282043118 TVANLLSGKS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 TVANLLSGKSPR 12 1 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;A0A2R8Y857;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8 E7ETY2;Q13428 TCOF1 Treacle protein 1 TVANLLS(0.001)GKS(0.999)PR;TVANLLS(0.039)GKS(0.961)PR;TVANLLS(0.011)GKS(0.989)PR;TVANLLS(0.002)GKS(0.998)PR;TVANLLSGKS(1)PR;TVANLLS(0.001)GKS(0.999)PR;TVANLLS(0.006)GKS(0.994)PR;TVANLLSGKS(1)PR 162.64 5.339099999999999e-06 67484016000.0 36772740.0 35803890.0 32914990.0 24238870.0 30004940.0 28072350.0 27550870.0 24677500.0 36503220.0 27794690.0 True False 34732882.807560235 34083817.38166542 35036742.92124608 26542524.917117987 32366158.073244665 27897140.050740514 30335980.810179662 24591899.51227179 29875155.419292387 27548450.670541573 1.2607926022025333 1.2372317336202259 1.2718226277135787 0.9634852149961648 1.174881246873706 1.0126573136314996 1.1011864577422092 0.8926781330236 1.0844586425776326 1.0 24.715467847879857 -5.178328333221514 0.7812256892528753 1.0129101016877824 1.3099778448290644 0.5612334621786099 0.08360544735948586 0.7074387697644349 0.7201745116244008 0.03738406474617726 0.14847937827350882 6.632414602004961e-06 5.178328333221514 0.29706774314128204 TVART(ph)PLGQR ddPTM_KYSE-520_SHP099_60min_R1 2 TVARTPLGQR 10 1 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 TVART(1)PLGQR;T(0.001)VART(0.999)PLGQR 85.973 0.013831 14874900000.0 14534300.0 15547400.0 15483700.0 9415100.0 10611100.0 12820900.0 10370600.0 9938600.0 18943300.0 12485500.0 True False 13728053.405591253 14800479.566876808 16481804.07679595 10309908.273246977 11446133.201099765 12740880.00742861 11418961.455302453 9904125.316286676 15503674.24173213 12374888.18357201 1.1093476726372047 1.1960091555837116 1.3318749900848381 0.8331314287698901 0.9249484141840416 1.0295753641105594 0.9227526977141842 0.8003405905060753 1.25283348113914 1.0 23.56091215362722 -5.261058841427122 24.999999207480666 0.9570151246841743 1.2107704616871642 0.4389801618869107 0.12723532400668805 30.427711928013395 1998926.1397158378 0.03430443293311338 0.05502296237012088 5.482026853363539e-06 5.261058841427122 0.2537553370029899 TVAS(ph)DLQK ddPTM_KYSE-520_SHP099_60min_R1 10 TVASDLQK 8 0 Q7L8J4;Q7L8J4-2 Q7L8J4 SH3BP5L SH3 domain-binding protein 5-like 1 TVAS(1)DLQK;TVAS(1)DLQK;TVAS(1)DLQK;TVAS(1)DLQK;TVAS(1)DLQK;TVAS(1)DLQK;TVAS(1)DLQK;TVAS(1)DLQK;TVAS(1)DLQK;TVAS(1)DLQK 176.65 6.990100000000001e-05 25189450000.0 35832600.0 31047840.0 30508160.0 28299580.0 29395220.0 29621980.0 28550640.0 30755520.0 36665260.0 30829840.0 True False 33844894.2474828 29556255.16264206 32474764.80838191 30989163.574621003 31708456.57807692 29437098.23510444 31436817.318594556 30648836.27951231 30007773.03998834 30556711.602852546 1.1076091788726146 0.9672590279604207 1.0627702754949033 1.0141524381742728 1.037692045865199 0.9633594942315853 1.0288023700711255 1.0030148753523322 0.9820354176195791 1.0 24.86498595858252 -4.245393090723906 24.42219564940363 1.0089702927061748 1.1076092820087606 0.5093574821773161 0.02966671491715679 1795.7780870485312 2733087.4590162425 0.007088150637589486 0.16747403018313645 5.68338280871598e-05 4.245393090723906 0.09863898930258586 TVCS(ph)TYLQSR ddPTM_KYSE-520_SHP099_60min_R1 1 TVCSTYLQSR 10 0 Q9H422-2;Q9H422 Q9H422-2 HIPK3 Homeodomain-interacting protein kinase 3 1 TVCS(0.375)T(0.375)Y(0.248)LQS(0.001)R 66.962 0.034499 418060000.0 1296800.0 1197700.0 1067900.0 1029700.0 1197400.0 1047200.0 1108800.0 1196100.0 1358300.0 1088800.0 True False 1224863.9188932918 1140160.6942156474 1136738.5427004118 1127562.3784094057 1291628.5677259532 1040664.0363608827 1220888.324845174 1191951.0082718385 1111666.9599565417 1079154.0790735832 1.1350222759152202 1.0565318857844992 1.0533607431445404 1.0448576345811336 1.196889853610869 0.964333135129561 1.1313382847917925 1.1045234701749795 1.0301281174889036 1.0 20.041469433450985 -7.938277453265258 4.6449157661176335 1.0005147043933735 1.083376486570067 0.19043402217843708 0.05968323819131001 0.2942846824976345 12.007891687660116 0.054540555822935134 0.014266603808595624 1.1527165982942994e-08 7.938277453265258 0.08286178217669349 TVCSTY(ph)LQSR ddPTM_KYSE-520_SHP099_60min_R1 1 TVCSTYLQSR 10 0 Q9H422-2;Q9H422 Q9H422-2 HIPK3 Homeodomain-interacting protein kinase 3 1 TVCS(0.007)T(0.418)Y(0.576)LQSR 169.65 8.0203e-06 478890000.0 662070.0 607960.0 543940.0 501730.0 580700.0 562650.0 528840.0 562830.0 645900.0 484950.0 True False 625343.657296176 578752.6890334353 579003.2427347713 549414.2683493746 626397.7862689663 559138.2926455798 582300.3081810272 560877.6740955097 528620.841813981 480653.720285391 1.3010273943679753 1.2040948912031668 1.2046161681448855 1.1430563109407677 1.3032205095531952 1.1632871421729307 1.2114757123595816 1.1669059250440945 1.0997955898481533 1.0 18.87463837479423 -7.959428254319738 0.9835101170859142 0.9989597996643745 1.2206527774037876 0.6864598856065866 0.04772895874110519 0.3155521098559529 0.6891905339396641 0.04409819485829544 0.014964339706925414 1.097922652701078e-08 7.959428254319738 0.2216929777394131 TVDGPSGK ddPTM_KYSE-520_SHP099_60min_R1 1 TVDGPSGK 8 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 119.29 0.007254899999999999 627330000.0 1710600.0 1888700.0 1205000.0 1283800.0 2083300.0 2668400.0 2023000.0 1529300.0 1857400.0 2951500.0 False True 1615709.6080034433 1797964.0170035008 1282676.2280681678 1405811.966011457 2247243.8576444606 2651745.525807277 2227504.582577369 1523995.2152413032 1520142.9812436725 2925352.006232251 0.5523128856155741 0.6146145876369984 0.4384690202531247 0.4805616428438274 0.7681960505460095 0.9064705786373485 0.7614483924778391 0.5209613106369906 0.5196444660352387 1.0 21.480178803281916 -5.762172803260854 24.999199785500817 0.7309521487161438 0.5222112690676178 0.360416014997761 0.14575652829784277 25.6829717182856 875433.2670946654 0.04725698875546728 0.05681813359337867 1.7291282122110801e-06 5.762172803260854 -0.20874087964852595 TVDLGIS(ph)DLEDDC ddPTM_KYSE-520_SHP099_60min_R1 3 TVDLGISDLEDDC 13 0 F5H5U2;Q8NHQ9-2;Q8NHQ9 F5H5U2 DDX55 ATP-dependent RNA helicase DDX55 1 TVDLGIS(1)DLEDDC;TVDLGIS(1)DLEDDC;TVDLGIS(1)DLEDDC 207.47 4.0201e-10 311390000.0 291791.0 256722.0 202441.0 218050.0 232460.0 279928.0 218761.0 284003.0 305370.0 282350.0 True False 275604.7715590621 244388.68977242208 215490.67077705235 238773.4064408771 250753.27948352715 278180.86551798094 240875.4967816154 283017.85987979855 249922.5057512543 279848.59866497625 0.9848352747658577 0.8732889531635447 0.770025906168747 0.8532235200746073 0.8960319282631789 0.994040587821589 0.8607350472030846 1.0113249136495281 0.8930632740114297 1.0 18.09428699792828 -6.030270491367023 5.994399310504422 0.9469758234019194 0.8644383806307248 0.25587243328142073 0.06567834302299035 0.2664550678916791 30.197386667431275 0.02156776029599517 0.022343382621615514 9.326732235653582e-07 6.030270491367023 -0.08253744277119468 TVDLKPDWGK ddPTM_KYSE-520_SHP099_60min_R1 3 TVDLKPDWGK 10 1 P31948;P31948-2;P31948-3;F5H783;F5GXD8 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ;; 115.33 0.00065645 9806300000.0 10267690.0 8601350.0 6002630.0 5777200.0 9654480.0 8771670.0 6608960.0 7876500.0 7096280.0 7152870.0 False True 9698120.76756743 8188128.235110431 6389569.134347581 6326263.351021488 10414232.649523009 8716922.753844215 7277058.174033882 7849178.25988892 5807774.434661271 7089501.136648648 1.3679553159860172 1.1549653603668264 0.9012720375087013 0.8923425258116316 1.4689655095317509 1.2295537564389025 1.0264556043888153 1.1071552297683087 0.8192077725523469 1.0 22.757252682966097 -7.497567251587708 2.1709435147879534 0.9185990812817454 1.1481568969697382 0.20336854884660527 0.1795222485354009 0.5895739032007024 5.099781107857774 0.15914481015084442 0.05340978397042491 3.18004121285745e-08 7.497567251587708 0.22955781568799283 TVDSQGPT(ph)PVCT(ph)PTFLER ddPTM_KYSE-520_SHP099_60min_R1 3 TVDSQGPTPVCTPTFLER 18 0 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 2 TVDSQGPT(1)PVCT(1)PTFLER;TVDSQGPT(0.999)PVCT(0.984)PT(0.016)FLER;TVDSQGPT(1)PVCT(0.645)PT(0.355)FLER 223.76 1.8094e-15 108800000.0 788000.0 592670.0 576100.0 647790.0 625580.0 616210.0 539480.0 630880.0 752180.0 655240.0 True False 744288.0691609443 564197.2435841932 613236.3277925912 709355.7668348348 674809.5869366975 612364.004818506 594015.90321742 628691.6245284985 615603.0729147551 649435.0833690058 1.1460546068744542 0.8687507928542553 0.9442611640433249 1.0922658553569125 1.0390716550699095 0.9429179613177192 0.9146655584664543 0.9680592265929049 0.9479054776672304 1.0 19.308825797519887 -6.275706697675768 23.556105895460462 0.9502105830793357 1.009805002140641 0.1496394702492868 0.07384583664809553 820.6688578861224 1354962.66463672 0.026462848243986196 0.02346374418368066 5.300212748014245e-07 6.275706697675768 0.05959441906130536 TVDSQGPTPVCT(ph)PTFLER ddPTM_KYSE-520_SHP099_60min_R1 1 TVDSQGPTPVCTPTFLER 18 0 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 TVDSQGPT(0.414)PVCT(0.581)PT(0.005)FLER 200.48 3.3896e-12 348700000.0 165420.0 159230.0 137410.0 97093.0 115500.0 179200.0 138230.0 167510.0 163340.0 163150.0 True False 156243.8228434056 151580.3517908973 146267.66846377362 106320.68952792507 124589.1928948953 178081.54632913516 152203.63739479496 166928.9469071279 133681.57346631915 161704.61792877922 0.9662298136236359 0.9373903709890274 0.9045361248013052 0.6574994016234755 0.7704739325983199 1.1012768133039277 0.9412448410213687 1.0323078527086325 0.8267022623014857 1.0 17.30300135403885 -6.248754831162213 24.871483290505797 0.9798842559453083 0.8448786045473552 0.28623455836817413 0.10504159116464985 1040.824983873588 2040820.0933659056 0.03710780595085961 0.03686022699368751 5.639559315737442e-07 6.248754831162213 -0.13500565139795306 TVEDEDQDS(ph)EEEKDNDSYIK ddPTM_KYSE-520_SHP099_60min_R1 8 TVEDEDQDSEEEKDNDSYIK 20 1 Q9Y5T5-4;Q9Y5T5-3;Q9Y5T5-2;Q9Y5T5 Q9Y5T5-4 USP16 Ubiquitin carboxyl-terminal hydrolase 16 1 T(0.001)VEDEDQDS(0.995)EEEKDNDS(0.003)Y(0.002)IK;TVEDEDQDS(1)EEEKDNDSYIK;TVEDEDQDS(1)EEEKDNDSYIK;TVEDEDQDS(1)EEEKDNDSYIK;TVEDEDQDS(1)EEEKDNDSYIK;TVEDEDQDS(1)EEEKDNDSYIK;TVEDEDQDS(1)EEEKDNDSYIK;TVEDEDQDS(1)EEEKDNDSYIK 388.92 1.3991999999999996e-92 7582930000.0 6579450.0 6161066.0 5435351.0 5497768.0 5950652.0 5871494.0 5642424.0 6053970.0 7116740.0 5606183.0 True False 6214474.792691598 5865079.141411394 5785722.422329084 6020274.21775578 6418934.457821592 5834847.828025881 6212815.282671545 6032970.191077224 5824519.414415899 5556516.580164368 1.1184119948235205 1.0555316549128155 1.0412499159964597 1.0834619371508638 1.1552083693470616 1.0500909596589882 1.118113334683465 1.085746817100069 1.0482321667514223 1.0 22.405749299852467 -8.015648174442324 2.6940920482926463 1.0003213052358917 1.0876398506895306 0.41246139596532483 0.03327066625014713 0.2774454499037355 4.814604887735253 0.032453755891647576 0.008770339134845071 9.646101458548664e-09 8.015648174442324 0.08731854545363893 TVEDLKNNESQWKDS(ph)PLATR ddPTM_KYSE-520_SHP099_60min_R1 2 TVEDLKNNESQWKDSPLATR 20 2 O95155-2;O95155;O95155-4;O95155-3;K7EP75 O95155-2 UBE4B Ubiquitin conjugation factor E4 B 1 TVEDLKNNES(0.004)QWKDS(0.975)PLAT(0.022)R;TVEDLKNNES(0.001)QWKDS(0.997)PLAT(0.003)R 99.838 0.0005501 648680000.0 778340.0 833240.0 760940.0 587440.0 689080.0 651060.0 499090.0 465560.0 907650.0 533930.0 True False 735163.9286176778 793209.899681262 809991.409947047 643270.1209797235 743306.6756711204 646996.4930415559 549542.8878490068 463945.0810225213 742843.6399945186 529199.7955912537 1.3891991923320919 1.4988854989920024 1.5305966039576342 1.2155524743939548 1.4045860974693947 1.22259399650503 1.038441232266586 0.8766917237830262 1.4037111241975617 1.0 19.013452978798032 -6.257550938333765 1.2687870944971615 1.0675354062138147 1.441829787079603 0.517843930070718 0.14819466710150359 0.35263742815862964 1.1581640779052345 0.07175442938127431 0.06488373699734186 5.526485840745012e-07 6.257550938333765 0.37429438086578837 TVEIVHIDIADR ddPTM_KYSE-520_SHP099_60min_R1 1 TVEIVHIDIADR 12 0 B3KYB6;B3KYB7;A0A0A0MSW4;P48739;P48739-2;P48739-3 B3KYB6 PITPNB Phosphatidylinositol transfer protein beta isoform 0 99.531 0.0011707 0.0 207890.0 205950.0 141250.0 206290.0 193450.0 177970.0 160290.0 155590.0 161980.0 158380.0 False True 196357.92728155944 196055.8528627476 150355.2010079909 225895.73957664985 208673.41442006466 176859.22321538054 176493.67747964748 155050.2946049789 132568.5151835091 156976.8764177756 1.2508716682511618 1.2489473439448995 0.9578175107003537 1.439038313996354 1.3293258165279371 1.1266578062407764 1.124329146478429 0.9877269706420369 0.8445098297834229 1.0 17.26019253206097 -7.0816773730955695 1.6290778049824777 0.9211099853155187 1.2337719056327188 0.5227122807311257 0.12209313933444983 0.3314118324662492 1.6731097748168673 0.0876930566916949 0.039844905247748724 8.28557450505532e-08 7.0816773730955695 0.3126619203172001 TVFPGAVPVLPAS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 4 TVFPGAVPVLPASPPPK 17 0 Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;M0R2S2 Q9UBC2-3 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 TVFPGAVPVLPAS(1)PPPK;TVFPGAVPVLPAS(1)PPPK;TVFPGAVPVLPAS(1)PPPK;TVFPGAVPVLPAS(1)PPPK 187.75 3.0853e-12 8147240000.0 1535610.0 1761550.0 1274450.0 1235370.0 1271190.0 1964440.0 1444150.0 1924670.0 1858480.0 2038280.0 True False 1450426.6521373566 1676922.4938595428 1356603.0861920994 1352779.1933724645 1371225.4209182851 1952179.2012879811 1590138.7755457803 1917993.7689913572 1521026.880468257 2020222.4249578423 0.7179539412189347 0.8300682504771901 0.6715117451586593 0.6696189373309694 0.678749727741934 0.966318944474007 0.7871107437979078 0.9493973264015132 0.7529007012680782 1.0 20.946082710676517 -6.250966695765799 24.825039446494632 0.8814807023881664 0.7152725912377557 0.5287805308699411 0.08355474691124616 549.2901607398777 1302068.9317699226 0.026767658200774196 0.026493919216895558 5.610910021137051e-07 6.250966695765799 -0.1662081111504108 TVFPGAVPVLPAS(ph)PPPKDSLR ddPTM_KYSE-520_SHP099_60min_R1 4 TVFPGAVPVLPASPPPKDSLR 21 1 Q9UBC2-3;Q9UBC2;Q9UBC2-2;M0R165;Q9UBC2-4;M0R2S2 Q9UBC2-3 EPS15L1 Epidermal growth factor receptor substrate 15-like 1 1 TVFPGAVPVLPAS(0.979)PPPKDS(0.021)LR;TVFPGAVPVLPAS(1)PPPKDSLR;TVFPGAVPVLPAS(1)PPPKDSLR;TVFPGAVPVLPAS(1)PPPKDSLR 166.75 1.5933000000000003e-10 31406690000.0 4745030.0 5113510.0 4475410.0 3557930.0 3644950.0 5474450.0 3853920.0 4568240.0 6000610.0 5480500.0 True False 4481813.726917207 4867849.30406501 4763902.089509185 3896074.597469344 3931786.8280714126 5440281.92690588 4243511.844234592 4552393.841675226 4911050.487068263 5431947.033764484 0.8250842099635112 0.8961518353928905 0.8770155636454493 0.717251949117269 0.7238264297556266 1.0015344209156656 0.7812137743349322 0.8380777303935335 0.9041050025969737 1.0 22.373037981436667 -6.248629963508285 24.993711949099975 0.887130275486053 0.8115783045031053 0.24387402930885282 0.08243510890979135 1528.3601032840334 2982135.249317644 0.028571461645323575 0.02838565619639858 5.641181025924911e-07 6.248629963508285 -0.07555197098294775 TVFS(ph)PTLPAAR ddPTM_KYSE-520_SHP099_60min_R1 10 TVFSPTLPAAR 11 0 C9J6P4;Q7Z2W4-2;Q7Z2W4;Q7Z2W4-3 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 1 TVFS(0.559)PT(0.441)LPAAR;TVFS(0.879)PT(0.121)LPAAR;TVFS(0.999)PT(0.001)LPAAR;TVFS(0.995)PT(0.005)LPAAR;TVFS(0.991)PT(0.009)LPAAR;TVFS(0.976)PT(0.024)LPAAR;TVFS(0.999)PT(0.001)LPAAR;TVFS(0.991)PT(0.009)LPAAR;T(0.003)VFS(0.986)PT(0.011)LPAAR;TVFS(0.696)PT(0.304)LPAAR 177.41 6.2727999999999995e-06 50650780000.0 12794260.0 12302300.0 9831070.0 8060610.0 9240660.0 12367360.0 9979190.0 12451600.0 14400080.0 12737750.0 True False 12084536.893075008 11711279.04187123 10464796.502468154 8826687.950889243 9967847.369836738 12290170.718800731 10987983.91270898 12408408.305825293 11785388.46847604 12624903.444819555 0.9571983616265771 0.9276331572006423 0.8289011118546202 0.6991489471161972 0.7895385032767834 0.9734863139760347 0.8703420157417313 0.9828517390298857 0.9335032556872348 1.0 23.589769018395756 -6.267821375619353 24.81598937829165 0.945858985343853 0.8368301918189718 0.35975269326015813 0.07409968864012909 616.7741714859833 2398280.5345498854 0.02870036363197767 0.025930804241623865 5.397325677063932e-07 6.267821375619353 -0.10902879352488126 TVHHHEPK ddPTM_KYSE-520_SHP099_60min_R1 2 TVHHHEPK 8 0 P29374-3;P29374-2;P29374;H7C485 P29374-3 ARID4A AT-rich interactive domain-containing protein 4A 0 ; 73.931 0.020465999999999998 103716000.0 100291.0 99440.0 41740.0 41221.0 141759.0 173923.0 66758.0 67567.0 53448.0 101495.0 False True 94727.65830484817 94662.75313751689 44430.627186361315 45138.63144645441 152914.62680162315 172837.48204353888 73506.5501352941 67332.62584725638 43743.19051443511 100595.83326191519 0.9416658248479496 0.9410206175344191 0.44167462752338876 0.4487127347405109 1.5200890717162083 1.7181375852171983 0.7307116781259678 0.66933811932296 0.43484097796122084 1.0 16.618211023547783 -5.72333830678538 24.999987283831338 1.016879055490592 0.6929943139033705 0.13730117579021994 0.3915232771161369 391.4982571756321 256879.50164732718 0.13033531355181824 0.16825864364158982 1.8908700945060398e-06 5.72333830678538 -0.32388474158722147 TVHRDS(ph)EEEDDYLFDDPLPIPLR ddPTM_KYSE-520_SHP099_60min_R1 4 TVHRDSEEEDDYLFDDPLPIPLR 23 1 B3KSJ7;Q96SD1-2;Q96SD1-3;Q96SD1 B3KSJ7 DCLRE1C Protein artemis 1 T(0.127)VHRDS(0.873)EEEDDYLFDDPLPIPLR;T(0.473)VHRDS(0.527)EEEDDYLFDDPLPIPLR;T(0.006)VHRDS(0.994)EEEDDYLFDDPLPIPLR;T(0.012)VHRDS(0.988)EEEDDYLFDDPLPIPLR 180.35 2.2608e-11 1128820000.0 571091.0 645379.0 602577.0 588235.0 571102.0 528686.0 522208.0 544505.0 695570.0 540089.0 True False 539411.4437883158 614374.0241063713 641420.077577289 644140.6775406986 616044.4782741171 525386.2745678859 574997.8808989443 542616.2392434226 569272.0218927865 535304.2316428843 1.0076726689285196 1.1477100082336666 1.198234648003301 1.203316991468175 1.150830577937775 0.9814722983889749 1.0741515700973212 1.0136595363315124 1.0634551125173302 1.0 19.029999531808706 -6.2466387904670375 24.453414468761494 1.0303766680278141 1.1484753636263958 0.5064420193951967 0.05649724955723429 520.7835470188555 860434.339961313 0.01925602324675039 0.01917781827240158 5.667104350396026e-07 6.2466387904670375 0.11809869559858166 TVHTEWTQR ddPTM_KYSE-520_SHP099_60min_R1 2 TVHTEWTQR 9 0 H7C393;C9JIF9;P13798 H7C393 APEH Acylamino-acid-releasing enzyme 0 ; 136.57 0.00047937 0.0 217920.0 208483.0 174301.0 242400.0 219410.0 184189.0 170919.0 181927.0 176514.0 171556.0 False True 205831.54318725012 198467.16374063733 185536.7213514606 265437.6231197828 236676.3187278697 183039.40812955957 188197.16052869082 181295.9376990809 144463.5071558338 170036.14730854818 1.2105163898694287 1.167205719972578 1.091160463750011 1.5610658517104528 1.391917674413053 1.0764735088793538 1.1068067790737908 1.066219980685052 0.8496046837246307 1.0 17.375481950207195 -6.816354157185861 1.5324007415619676 0.9680406274777883 1.2743713881978316 0.48171395669213424 0.13695610547727546 0.392766756376881 1.8642031011727922 0.08946243643361185 0.050976354556959 1.5263208709447624e-07 6.816354157185861 0.3063307607200433 TVIIEQSWGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 10 TVIIEQSWGSPK 12 0 P10809;E7EXB4;E7ESH4;C9JL19;C9JCQ4;C9JL25;P10809-2 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 1 TVIIEQSWGS(1)PK;TVIIEQSWGS(1)PK;TVIIEQSWGS(1)PK;TVIIEQSWGS(1)PK;TVIIEQS(0.005)WGS(0.995)PK;TVIIEQSWGS(1)PK;TVIIEQSWGS(1)PK;TVIIEQSWGS(1)PK;TVIIEQSWGS(1)PK;TVIIEQSWGS(1)PK 223.7 1.6099e-11 21716610000.0 18452840.0 18675910.0 16398560.0 17427870.0 17687980.0 17844580.0 16504950.0 16716670.0 21206160.0 16194420.0 True False 17429224.18037544 17778691.250487573 17455637.41622369 19084209.52491984 19079923.395160608 17733205.357109156 18173431.418789104 16658683.773470115 17355655.907790624 16050950.037868101 1.0858686955760035 1.10764105604611 1.0875142826462976 1.1889769440373026 1.1887099112604813 1.1048072117396295 1.1322340033402105 1.03786278906658 1.0812852738837517 1.0 23.936155355600086 -7.582940059808291 1.1219691547635346 1.013002963373795 1.131413636452474 0.5084344708060468 0.03931982715459447 0.4124864232948172 0.9728973068257672 0.038816278740602284 0.013417227746418136 2.6125219029769808e-08 7.582940059808291 0.11841067307867914 TVIIEQSWGSPK ddPTM_KYSE-520_SHP099_60min_R1 1 TVIIEQSWGSPK 12 0 P10809;E7EXB4;E7ESH4;C9JL19;C9JCQ4;C9JL25;P10809-2 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 132.32 0.00042652 282910000.0 218980.0 208200.0 247770.0 140140.0 207860.0 193530.0 203370.0 219220.0 252330.0 209070.0 False True 206832.74287419242 198197.75948542854 263741.65064601647 153458.86346537262 224217.39943838032 192322.10748369148 223928.62429993053 218459.57698633245 206513.23272166273 207217.8024539986 0.9981417640026771 0.9564707140904437 1.2727750585259967 0.7405679514405611 1.0820373384094524 0.9281157564943586 1.0806437557392863 1.0542510073903013 0.9965998590662003 1.0 17.660788427310745 -6.794211370278234 24.982459153631048 1.037394499590614 0.9993714835395254 0.018714721061870332 0.12676711302440447 1086.232467502453 828036.9175204361 0.05117761177083351 0.03450647694412579 1.6061593481269655e-07 6.794211370278234 -0.03802301605108849 TVIIHDRPDITHPR ddPTM_KYSE-520_SHP099_60min_R1 1 TVIIHDRPDITHPR 14 1 Q9NWH9;Q9NWH9-3;H7C3F4 Q9NWH9 SLTM SAFB-like transcription modulator 0 128.96 0.00015978 413000000.0 137720.0 106740.0 94329.0 90093.0 131560.0 110630.0 108560.0 131410.0 98620.0 94031.0 False True 130080.39706198628 101612.05017999353 100409.59827173635 98655.41163255181 141913.023525995 109939.51713388518 119534.30424349944 130954.16938132473 80713.09400788786 93197.95849501099 1.3957429879641587 1.0902819312875074 1.0773798041628928 1.0585576468161904 1.5227052804337102 1.179634392310969 1.2825850069440983 1.4051184328070327 0.866039292182656 1.0 16.508010732482852 -7.772690769076516 24.99892682789838 0.9330194794828022 1.2415720220870246 0.4152888296379129 0.1507929956881368 250.9007084287854 557445.9793202174 0.14352185431135328 0.038428273146057824 1.6877543302395908e-08 7.772690769076516 0.3085525426042224 TVKEEAEKPER ddPTM_KYSE-520_SHP099_60min_R1 8 TVKEEAEKPER 11 2 K7ELL7;P14314-2;P14314 K7ELL7 PRKCSH Glucosidase 2 subunit beta 0 ;;;;;;; 119.21 0.00015648 16879450000.0 16908380.0 15515180.0 11627580.0 9692620.0 16002970.0 14706750.0 10598140.0 13080470.0 15323000.0 11967360.0 False True 15970438.455380104 14769807.464040028 12377112.411585793 10613803.690607527 17262312.694556016 14614959.718058094 11669503.419078872 13035096.902574666 12540729.461395923 11861338.500865204 1.346428015203779 1.2452057972177988 1.0434836178634448 0.8948234374926002 1.4553427248785495 1.2321509682058254 0.9838268605375068 1.098956656672756 1.057277765108985 1.0 23.499763485191668 -1.0000000000000002 0.1452125356126662 0.9852146535280208 1.9628868281681435 0.18863281280855682 0.15163218621108504 150.18984315791073 1.4438020975253039 0.6389622179075917 30.71520783684586 0.09999999999999995 1.0000000000000002 0.9776721746401227 TVKEPEGPPPS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 5 TVKEPEGPPPSPGK 14 1 P58012 P58012 FOXL2 Forkhead box protein L2 1 TVKEPEGPPPS(1)PGK;TVKEPEGPPPS(1)PGK;TVKEPEGPPPS(1)PGK;TVKEPEGPPPS(1)PGK;TVKEPEGPPPS(1)PGK 145.88 2.705e-06 6492590000.0 8659390.0 8114520.0 8050860.0 5442300.0 6230740.0 7746650.0 5960960.0 7472480.0 10068180.0 7898940.0 True False 8179036.374634003 7724686.279057157 8569831.317431448 5959534.555712845 6721063.789938869 7698300.283876095 6563552.010163325 7446559.710969937 8240052.310163629 7828961.53688232 1.0447153605369597 0.9866808315082504 1.09463193516265 0.7612164816032644 0.8584872665775488 0.9833105256181578 0.8383681512857564 0.9511554854228259 1.052508978533699 1.0 22.900389524995262 -5.224106638282465 24.99998122726485 0.9152691543748083 1.0364765203382247 0.30193088023702086 0.08410189854486991 735.7852173870516 492719.858225578 0.023178896703355698 0.040145931566767205 5.968887063155372e-06 5.224106638282465 0.12120736596341641 TVKPVENKDDDDSIADFLNS(ph)DEEEDRVSLQNLK ddPTM_KYSE-520_SHP099_60min_R1 9 TVKPVENKDDDDSIADFLNSDEEEDRVSLQNLK 33 3 Q15649-2;Q15649 Q15649-2 ZNHIT3 Zinc finger HIT domain-containing protein 3 1 TVKPVENKDDDDS(0.057)IADFLNS(0.943)DEEEDRVSLQNLK;TVKPVENKDDDDSIADFLNS(1)DEEEDRVSLQNLK;TVKPVENKDDDDSIADFLNS(1)DEEEDRVSLQNLK;TVKPVENKDDDDSIADFLNS(1)DEEEDRVSLQNLK;TVKPVENKDDDDSIADFLNS(1)DEEEDRVSLQNLK;TVKPVENKDDDDSIADFLNS(1)DEEEDRVSLQNLK;TVKPVENKDDDDSIADFLNS(1)DEEEDRVSLQNLK;TVKPVENKDDDDSIADFLNS(1)DEEEDRVSLQNLK;TVKPVENKDDDDSIADFLNS(1)DEEEDRVSLQNLK 351.08 1.3800999999999998e-82 30547920000.0 8127390.0 8130790.0 7584370.0 7048900.0 7498450.0 6960710.0 6890950.0 7091410.0 8877650.0 6708270.0 True False 7676547.475149705 7740174.643835396 8073270.6256210655 7718825.336670938 8088535.354655648 6917265.626945722 7587554.475191079 7066811.55385753 7265692.547344614 6648839.946755091 1.1545694492008607 1.1641391138634525 1.2142374745478954 1.160928131596557 1.2165333230202342 1.0403718065617797 1.1411847083030056 1.0628638394741967 1.0927759737833023 1.0 22.664671218350684 -6.261186915010307 24.999992506521117 1.0759773445123513 1.181695956508036 0.6771067543601308 0.03936300163245536 14.342369647036936 1420258.997530908 0.012733975445904783 0.012011397871378289 5.480410440223424e-07 6.261186915010307 0.10571861199568477 TVLEGSTASTS(ph)PADHSALPNQSLTVR ddPTM_KYSE-520_SHP099_60min_R1 2 TVLEGSTASTSPADHSALPNQSLTVR 26 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 1 TVLEGS(0.001)T(0.008)AS(0.035)T(0.257)S(0.699)PADHSALPNQSLTVR;TVLEGSTAS(0.001)T(0.06)S(0.938)PADHSALPNQSLTVR 154.27 3.0271e-07 534520000.0 153917.0 189818.0 165805.0 183953.0 181827.0 187107.0 128611.0 190120.0 240864.0 180911.0 True False 145378.9171840673 180698.8583573732 176493.0555973797 201435.8378125138 196135.7504458887 185939.19580918236 141612.25500240162 189460.51809434177 197129.16928732416 179308.26928662832 0.8107764229862474 1.0077552980477547 0.9842995880756149 1.1234051759794417 1.0938466542910035 1.0369805952002937 0.7897697945878405 1.0566189660304224 1.099386938882382 1.0 17.452082497967766 -4.212822840185062 2.9384582872438165 1.0227744366825007 0.7597018361104643 0.33679818881315127 0.0887610265988867 0.6533039163342391 7.237529709837573 0.024257151322932213 0.4281485130582246 6.12600236049947e-05 4.212822840185062 -0.2630726005720364 TVLPTVPES(ph)PEEEVK ddPTM_KYSE-520_SHP099_60min_R1 9 TVLPTVPESPEEEVK 15 0 O75152;E9PBY7;E9PQ61;A0A1W2PPR9 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 TVLPTVPES(1)PEEEVK;TVLPTVPES(1)PEEEVK;TVLPTVPES(1)PEEEVK;TVLPTVPES(1)PEEEVK;TVLPT(0.117)VPES(0.883)PEEEVK;TVLPTVPES(1)PEEEVK;TVLPTVPES(1)PEEEVK;TVLPTVPES(1)PEEEVK;TVLPTVPES(1)PEEEVK 273.99 1.8643e-28 9406600000.0 9639290.0 11261570.0 8445810.0 7438510.0 7835510.0 10293440.0 7738170.0 10085540.0 11829740.0 11723490.0 True False 9104579.36825178 10720547.273238797 8990240.426373791 8145463.753930425 8452120.059046594 10229194.82280231 8520419.74086145 10050555.615722733 9681757.419477498 11619628.999337204 0.7835516408287317 0.922623887032048 0.7737114865618002 0.7010089353451002 0.7274001656618049 0.8803374723397619 0.7332781228512084 0.8649635557465757 0.833224315512118 1.0 23.470060670186243 -8.396595632152009 0.905087562823308 1.0001749883288908 0.7912024390125428 0.4601248226087039 0.06671941209203845 1.2666260396063334 1.786719219319925 0.06820899277672127 0.02258566827924563 4.012401349880273e-09 8.396595632152009 -0.208972549316348 TVLS(ph)LFDEEEDKMEDQNIIQAPQK ddPTM_KYSE-520_SHP099_60min_R1 18 TVLSLFDEEEDKMEDQNIIQAPQK 24 1 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;B1AP61;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 T(0.214)VLS(0.786)LFDEEEDKMEDQNIIQAPQK;T(0.002)VLS(0.998)LFDEEEDKMEDQNIIQAPQK;T(0.198)VLS(0.802)LFDEEEDKMEDQNIIQAPQK;T(0.017)VLS(0.983)LFDEEEDKMEDQNIIQAPQK;T(0.178)VLS(0.822)LFDEEEDKMEDQNIIQAPQK;T(0.135)VLS(0.865)LFDEEEDKMEDQNIIQAPQK;T(0.025)VLS(0.975)LFDEEEDKMEDQNIIQAPQK;T(0.001)VLS(0.999)LFDEEEDKMEDQNIIQAPQK;T(0.003)VLS(0.997)LFDEEEDKMEDQNIIQAPQK;T(0.056)VLS(0.944)LFDEEEDKMEDQNIIQAPQK;T(0.003)VLS(0.997)LFDEEEDKMEDQNIIQAPQK;TVLS(1)LFDEEEDKMEDQNIIQAPQK;TVLS(1)LFDEEEDKMEDQNIIQAPQK;T(0.001)VLS(0.999)LFDEEEDKMEDQNIIQAPQK;T(0.015)VLS(0.985)LFDEEEDKMEDQNIIQAPQK;T(0.209)VLS(0.791)LFDEEEDKMEDQNIIQAPQK;T(0.024)VLS(0.976)LFDEEEDKMEDQNIIQAPQK;TVLS(1)LFDEEEDKMEDQNIIQAPQK 278.17 1.8027e-38 11758216000.0 3106920.0 2801487.0 2344442.0 2090794.0 2070767.0 2827477.0 2170146.0 2794528.0 3272524.0 2865975.0 True False 2934572.9541085325 2666899.359402286 2495568.482559828 2289502.433139862 2233724.581847479 2809829.6672436614 2389525.5362639385 2784834.434615735 2678316.135216684 2840584.6911948132 1.0330876467809822 0.9388557812302116 0.8785404252496116 0.8059968922020931 0.7863608463326347 0.9891729952476032 0.841209045331738 0.980373668578905 0.9428749452599932 1.0 21.437756486472168 -7.2833670435139375 24.24200780899478 0.9712182523810368 0.893022992044636 0.18958852617464073 0.0738403124420236 1042.5824003371483 1152612.5392753496 0.04248485963442916 0.02043893170508659 5.207544100421589e-08 7.2833670435139375 -0.07819526033640078 TVLSSAR ddPTM_KYSE-520_SHP099_60min_R1 1 TVLSSAR 7 0 Q6GYQ0-2;A0A1B0GUI1;Q6GYQ0-4;Q6GYQ0;Q6GYQ0-7;Q6GYQ0-5;Q6GYQ0-6 Q6GYQ0-2 RALGAPA1 Ral GTPase-activating protein subunit alpha-1 0 103.28 0.033642 1212400000.0 303850.0 424490.0 318360.0 427270.0 478940.0 351670.0 262680.0 408850.0 378400.0 320150.0 False True 286994.8347900416 404096.8632275202 338881.9949940101 467877.61233659065 516629.8532041653 349475.09708463674 289234.25790975 407431.7947763074 309692.09868773853 317313.7200729311 0.9044513887520496 1.273493195108749 1.0679714539797451 1.4744953739442912 1.628135881062513 1.1013551415435605 0.9115088305771104 1.2840030827619546 0.9759808010084127 1.0 18.275550376572433 -6.498222366994823 24.876853806946745 1.0579531637465702 1.2795546485032523 0.2148997790685958 0.20679457272259325 1199.1171304540953 1209842.1754551255 0.07626172924146572 0.06692147594603125 3.1752478673544223e-07 6.498222366994823 0.22160148475668207 TVLTPS(ph)RR ddPTM_KYSE-520_SHP099_60min_R1 1 TVLTPSRR 8 1 Q9BQ89 Q9BQ89 FAM110A Protein FAM110A 1 T(0.015)VLT(0.425)PS(0.56)RR 65.88 0.031056 0.0 360090.0 364850.0 352110.0 276080.0 283840.0 329690.0 269750.0 306340.0 410580.0 346010.0 True False 340115.0898783812 347322.0583489848 374807.57399591914 302318.56019352155 306176.59317131643 327632.28241770394 297018.9625063003 305277.3780402935 336029.02187952393 342944.6205917064 0.991749307195887 1.0127642700728932 1.0929099087463081 0.8815375487503204 0.892787274642327 0.9553504057081198 0.8660843316155029 0.8901652328401508 0.9798346488122469 1.0 18.387616100257002 -5.269913252588718 24.997741373137618 0.9167360641798842 1.0305034743111505 0.5136913371277727 0.04816700436927976 456.0593386801052 1345364.609153141 0.013250351149160655 0.020011030646977342 5.371390755851517e-06 5.269913252588718 0.11376741013126634 TVMDGGLES(ph)DGPNMTENGLEDESRPQR ddPTM_KYSE-520_SHP099_60min_R1 8 TVMDGGLESDGPNMTENGLEDESRPQR 27 1 P51116 P51116 FXR2 Fragile X mental retardation syndrome-related protein 2 1 T(0.006)VMDGGLES(0.993)DGPNMT(0.001)ENGLEDESRPQR;TVMDGGLES(1)DGPNMTENGLEDESRPQR;TVMDGGLES(1)DGPNMTENGLEDESRPQR;TVMDGGLES(1)DGPNMTENGLEDESRPQR;TVMDGGLES(1)DGPNMTENGLEDESRPQR;TVMDGGLES(1)DGPNMTENGLEDESRPQR;TVMDGGLES(1)DGPNMTENGLEDESRPQR;TVMDGGLES(1)DGPNMTENGLEDESRPQR 280.69 1.6813999999999998e-42 11130720000.0 4300610.0 3761260.0 3437650.0 3513030.0 3597130.0 3763350.0 3425690.0 3697130.0 4235340.0 3682400.0 True False 4062046.590246513 3580563.4238336375 3659246.4194344752 3846907.31496902 3880203.666130001 3739861.5367062013 3771992.176712542 3684305.5189466327 3466309.020232894 3649776.8008638443 1.1129575346320058 0.9810362713101182 1.0025945747061544 1.0540116628662108 1.0631345087216342 1.0246822588770457 1.033485712282398 1.0094605012763016 0.9497317806975137 1.0 21.799376809170873 -7.51501799113247 3.7792985557290923 0.9748051888995176 1.035835833373372 0.33840795419380343 0.03548756589326929 0.2605004297999381 8.1657391564655 0.0246080724259491 0.009292445487193237 3.054794562328229e-08 7.51501799113247 0.06103064447385431 TVMYTAVGSEWRPFGY(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 TVMYTAVGSEWRPFGYPR 18 1 C9J1S9;C9J8G3;Q9Y276 C9J1S9 BCS1L Mitochondrial chaperone BCS1 1 TVMYTAVGS(0.02)EWRPFGY(0.98)PR;TVMYTAVGS(0.032)EWRPFGY(0.968)PR 71.781 0.010267 195311000.0 181625.0 229970.0 211430.0 219290.0 231870.0 211780.0 209924.0 204271.0 271300.0 186718.0 True False 171549.8991895386 218921.8960079927 225059.11609996113 240131.2556680575 250116.84984016742 210458.2024641976 231145.16658080646 203562.43157820977 222038.75891644694 185063.82378440571 0.9269769514186065 1.1829534888624733 1.2161162106006673 1.2975591380182647 1.3515167077253667 1.1372195719319818 1.2490024352359879 1.0999579897114544 1.199795586062871 1.0 17.497663379652497 -8.674412016570153 0.861020817385235 0.9988287811888273 1.1985837121210228 0.19401388907816708 0.11084158510890285 4.457096823977043 4.362773446054796 0.12858626359125108 0.03762900866544335 2.116352392235389e-09 8.674412016570153 0.19975493093219543 TVNS(ph)TRETPPK ddPTM_KYSE-520_SHP099_60min_R1 2 TVNSTRETPPK 11 1 Q5SWC8;Q5SSJ5-2;Q5SSJ5;B0QZK7;B0QZK5;B0QZK6;B0QZK9;B0QZK8;Q5SSJ5-5 Q5SWC8 HP1BP3 Heterochromatin protein 1-binding protein 3 1 TVNS(0.455)T(0.455)RET(0.091)PPK;TVNS(0.463)T(0.463)RET(0.073)PPK 155.39 5.5828e-05 5368280000.0 1737590.0 1736880.0 1338860.0 1039460.0 940860.0 1593230.0 1191420.0 1528150.0 1629690.0 1613080.0 True False 1641202.4189002109 1653437.6776899686 1425165.05785174 1138249.965874954 1014900.3292388845 1583286.0605913384 1311860.3607386698 1522849.2043228894 1333779.3771417043 1598789.3661572486 1.0265282304478316 1.0341810576737005 0.8914026375326592 0.7119449190550855 0.634793019469623 0.9903030968968896 0.8205335790366034 0.9525014592654665 0.8342433377246523 1.0 20.60854845159646 -4.843049593552568 4.242116593881029 0.8404721622865444 1.0316512407962903 0.29404323520298026 0.10963550040474265 0.2486479844166706 8.281964956779833 0.030110635209803203 0.06959206890365928 1.4353255193298242e-05 4.843049593552568 0.19117907850974591 TVNSTRET(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 4 TVNSTRETPPK 11 1 Q5SWC8;Q5SSJ5-2;Q5SSJ5;B0QZK7;B0QZK5;B0QZK6;B0QZK9;B0QZK8;Q5SSJ5-5 Q5SWC8 HP1BP3 Heterochromatin protein 1-binding protein 3 1 TVNS(0.066)T(0.025)RET(0.909)PPK;T(0.013)VNS(0.058)T(0.042)RET(0.887)PPK;TVNS(0.023)T(0.104)RET(0.873)PPK;TVNS(0.197)T(0.197)RET(0.607)PPK 154.86 0.00012188 10458210000.0 3194410.0 3578030.0 2861030.0 2064980.0 2089900.0 3085400.0 2363860.0 2917530.0 3474410.0 3365310.0 True False 3017209.7094015386 3406136.0680674766 3045456.5716098533 2261235.078341125 2254363.240095597 3066142.874128982 2602822.0378503934 2907409.7693866226 2843544.7267485913 3335495.971571562 0.9045760316058609 1.0211782886557144 0.9130445959360423 0.6779306878538112 0.67587047302996 0.9192464629733399 0.7803403332020936 0.8716574069243319 0.8525103166018272 1.0 21.669469868223025 -5.011952107717725 24.09956573716292 0.8142598771719113 0.9639357713353939 0.24703910871209378 0.09796287253697233 429.3287387252546 865683.4197638079 0.02624277740559736 0.04895061362565517 9.728545004184578e-06 5.011952107717725 0.1496758941634826 TVNSTRET(ph)PPKSK ddPTM_KYSE-520_SHP099_60min_R1 4 TVNSTRETPPKSK 13 2 Q5SWC8;Q5SSJ5-2;Q5SSJ5;B0QZK7;B0QZK5;B0QZK6;B0QZK9;B0QZK8;Q5SSJ5-5 Q5SWC8 HP1BP3 Heterochromatin protein 1-binding protein 3 1 TVNS(0.001)T(0.003)RET(0.99)PPKS(0.006)K;TVNS(0.224)T(0.072)RET(0.701)PPKS(0.002)K;TVNSTRET(0.993)PPKS(0.007)K;TVNSTRET(1)PPKSK 89.46799999999999 0.0022206 17569400000.0 2245260.0 2626120.0 2126420.0 1365190.0 1364820.0 1832650.0 1405650.0 1261320.0 2654520.0 1852840.0 True False 2120710.9519851557 2499957.2533135163 2263492.435592293 1494937.247140659 1472223.56923646 1821211.7515630012 1547746.8198219882 1256944.775314302 2172526.0830036364 1836425.2790877072 1.1548038333684205 1.3613171642656956 1.2325535165344395 0.8140474127448891 0.8016789934234765 0.9917156838898102 0.8428041355381867 0.6844519020881277 1.1830190467008252 1.0 20.808468765866017 -5.230578656387635 8.233109767997368 0.8864207364856066 1.261866432648196 0.5698104922473499 0.13756622666127566 0.19445164539236492 47.15387243997764 0.03601051096182628 0.06167501396803869 5.880595992444375e-06 5.230578656387635 0.3754456961625895 TVPLFPHPPVPSLSTSESKPPPQPS(ph)PPT(ph)SPVR ddPTM_KYSE-520_SHP099_60min_R1 1 TVPLFPHPPVPSLSTSESKPPPQPSPPTSPVR 32 1 E9PKC0;Q6IQ23;Q6IQ23-2;A0A1B0GUM1;A0A1B0GUN0;H0YDE2;Q6IQ23-3 E9PKC0 PLEKHA7 Pleckstrin homology domain-containing family A member 7 2 TVPLFPHPPVPSLSTSESKPPPQPS(0.998)PPT(0.862)S(0.139)PVR 122.41 0.0023193000000000003 926100000.0 289660.0 304810.0 283470.0 366660.0 316980.0 324560.0 299510.0 331370.0 372600.0 295110.0 True False 273591.9823771056 290166.47007086227 301742.9297680363 401507.2561596517 341924.5226305097 322534.3006505809 329787.393735911 330220.55481233925 304945.23248163715 292495.5549921061 0.9353714191810175 0.992037195500948 1.0316154369463144 1.372695240344721 1.1689904916323859 1.1026981270169576 1.127495403288475 1.1289763183623467 1.0425636467872719 1.0 18.158055174895 -5.012447594433764 24.599457339913613 1.1447203342503638 0.9757347310681852 0.354270028069141 0.09388661659981694 500.80059243429804 989710.3316334512 0.025639923771123715 0.04757686800988594 9.717452033206924e-06 5.012447594433764 -0.1689856031821786 TVPS(ph)TPTLVVPHR ddPTM_KYSE-520_SHP099_60min_R1 2 TVPSTPTLVVPHR 13 0 P12270 P12270 TPR Nucleoprotein TPR 1 T(0.096)VPS(0.554)T(0.35)PTLVVPHR;T(0.002)VPS(0.627)T(0.372)PTLVVPHR 191.19 1.0469999999999999e-08 781590000.0 539840.0 502610.0 487080.0 415050.0 590950.0 708560.0 649560.0 985650.0 980900.0 1002580.0 True False 509893.9990556395 478463.8611670091 518477.95615555433 454496.227210667 637454.4029544439 704137.6142130125 715223.8638946891 982231.0102024389 802793.2864767514 993697.9211954367 0.5131277707034223 0.4814983014067377 0.5217661676617135 0.45737866359215057 0.6414971686642704 0.7086032879750036 0.719759847171927 0.9884603653198721 0.8078846391375927 1.0 19.92244782136706 -6.675863298567387 0.7564613920904455 0.9643272443741928 0.4791897396571203 0.8832704484888805 0.06477726084342007 0.1998477676087532 0.22977713579024775 0.05004906482389329 0.03333859291865581 2.1092919802877064e-07 6.675863298567387 -0.4851375047170725 TVPST(ph)PTLVVPHR ddPTM_KYSE-520_SHP099_60min_R1 5 TVPSTPTLVVPHR 13 0 P12270 P12270 TPR Nucleoprotein TPR 1 T(0.007)VPS(0.363)T(0.631)PTLVVPHR;T(0.001)VPS(0.036)T(0.963)PTLVVPHR;T(0.003)VPS(0.229)T(0.767)PTLVVPHR;TVPS(0.025)T(0.974)PTLVVPHR;TVPS(0.018)T(0.982)PTLVVPHR 210.34 5.0711e-11 9514200000.0 990820.0 892740.0 690900.0 1042190.0 877180.0 2460040.0 2422190.0 4374990.0 3944140.0 4557770.0 True False 935857.2394492974 849851.4303699407 735436.5194790863 1141239.4242541501 946209.0755285209 2444685.9778544977 2667048.6034963317 4359814.180820338 3227983.59967827 4517391.703691405 0.2071676092831529 0.1881287889370942 0.16280114006454682 0.2526323814960703 0.20945916085942298 0.5411720165547771 0.590395692566784 0.965117587048672 0.7145680099072458 1.0 22.107058584820223 -6.70819217857802 1.0747649847022591 0.9124817989025424 0.18111767405175036 0.9196250471455625 0.08791945866395832 0.12195435409280567 0.28219254989778325 0.05571346179745245 0.03316422290060755 1.9579780617451904e-07 6.70819217857802 -0.731364124850792 down TVQGS(ph)GHQEHINIHK ddPTM_KYSE-520_SHP099_60min_R1 1 TVQGSGHQEHINIHK 15 0 Q14247-3;Q14247;Q14247-2 Q14247-3 CTTN Src substrate cortactin 1 T(0.003)VQGS(0.997)GHQEHINIHK 150.98 8.0356e-06 577170000.0 242740.0 258700.0 220410.0 219540.0 297610.0 248750.0 188160.0 242570.0 283350.0 215580.0 True False 229274.72830980652 246271.66368338309 234617.98126846924 240405.0155928924 321030.21383073437 247197.4589808723 207181.0490646358 241728.58128626388 231900.78267222707 213670.12891870228 1.0730312630505385 1.152578813564928 1.0980382819806191 1.1251222471268423 1.5024571541906109 1.1569116386639453 0.9696303835875184 1.131316681978684 1.085321489933023 1.0 17.705025707782948 -6.541507338694418 22.515007515203774 1.0583329285949081 1.194439527886566 0.24394078969448774 0.11949523532920048 126.46522363835626 152845.05883360797 0.04832340732847506 0.037442649918895884 2.874039027784111e-07 6.541507338694418 0.13610659929165791 TVQGSGHQEHINIHK ddPTM_KYSE-520_SHP099_60min_R1 1 TVQGSGHQEHINIHK 15 0 Q14247-3;Q14247;Q14247-2 Q14247-3 CTTN Src substrate cortactin 0 100.4 0.00067125 70212000.0 102810.0 133860.0 142650.0 290630.0 97066.0 105070.0 111200.0 99852.0 92510.0 102020.0 False True 97106.92435334616 127429.16467204364 151845.44724806983 318251.38781890454 104704.5419700077 104414.21915626255 122441.18120741652 99505.63671763202 75712.51598732213 101116.18217035901 0.9603499881922152 1.2602252373151601 1.5016928446946596 3.1473833464431977 1.0354874929277202 1.0326163123954488 1.2108960067452852 0.9840723273153889 0.7487675499828784 1.0 16.62565437245657 -5.942573002835842 24.999999983661688 1.0106406666853767 1.7221087975591152 0.2916653521606162 0.5462220703746316 113.59520696700444 49451.19002204007 0.17850502117959682 0.20240566588151734 1.1413714293865124e-06 5.942573002835842 0.7114681308737385 TVQS(ph)LEIDLDSMR ddPTM_KYSE-520_SHP099_60min_R1 13 TVQSLEIDLDSMR 13 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 Keratin, type I cytoskeletal 18 1 T(0.005)VQS(0.995)LEIDLDSMR;TVQS(1)LEIDLDSMR;TVQS(1)LEIDLDSMR;TVQS(1)LEIDLDSMR;TVQS(1)LEIDLDSMR;TVQS(1)LEIDLDSMR;TVQS(1)LEIDLDSMR;TVQS(1)LEIDLDSMR;TVQS(1)LEIDLDSMR;TVQS(1)LEIDLDSMR;T(0.005)VQS(0.995)LEIDLDSMR;TVQS(1)LEIDLDSMR;T(0.2)VQS(0.8)LEIDLDSMR 368.4 1.5562e-64 7637248000.0 2224093.0 2405478.0 2108630.0 1863196.0 1940134.0 2286925.0 1855236.0 2148066.0 2647088.0 2359527.0 True False 2100718.127670525 2289915.22618391 2244555.6637272863 2040273.587649696 2092811.5079475744 2272651.4527832465 2042781.360238514 2140614.8604083755 2166443.5468581617 2338623.42646423 0.8982712239595606 0.9791722772768243 0.9597764387064381 0.872425019163684 0.8948903377367176 0.9717902536447578 0.8734973476798699 0.9153311457436206 0.9263755431260743 1.0 21.157228141783754 -8.072482991677836 16.27834979886653 1.000000000629268 0.921522483227365 0.2960012612528725 0.03649508494883325 445.3365234681514 100017.08171498553 0.03610843925204126 0.009323131542426236 8.462857113379021e-09 8.072482991677836 -0.07847751740190301 TVQSLEIDLDSMR ddPTM_KYSE-520_SHP099_60min_R1 3 TVQSLEIDLDSMR 13 0 P05783;F8VZY9;CON__H-INV:HIT000015463 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;; 236.5 7.4956e-12 247010000.0 602510.0 740050.0 684890.0 392550.0 646060.0 778870.0 590050.0 677560.0 806820.0 724840.0 False True 569087.5692260921 704496.8871623033 729039.1052627449 429857.8339755387 696901.2464214378 774008.7834228436 649698.012333059 675209.7025036935 660321.826277064 718418.481516987 0.7921393781858548 0.9806218872247171 1.0147833387071723 0.5983390531210531 0.9700491626410918 1.077378719139399 0.9043447921344948 0.9398556967492605 0.9191325714265478 1.0 19.45446493872793 TVQSQIGPPLTDSRPLGS(ph)PPNATR ddPTM_KYSE-520_SHP099_60min_R1 1 TVQSQIGPPLTDSRPLGSPPNATR 24 1 Q96QT6-4;Q96QT6;K7EPF7;C9J9G2;Q96QT6-2;Q96QT6-5;Q96QT6-3 Q96QT6-4 PHF12 PHD finger protein 12 1 TVQSQIGPPLT(0.003)DS(0.149)RPLGS(0.831)PPNAT(0.017)R 65.587 0.016227000000000002 425200000.0 156910.0 158290.0 122610.0 112230.0 130110.0 146240.0 118900.0 126690.0 206010.0 160960.0 True False 148205.8895076699 150685.51080186616 130513.63678293636 122896.30545682024 140348.91677536632 145327.26191502635 130919.5723521748 126250.54195966841 168603.77708948488 159534.01962498494 0.9289923857999444 0.9445352856781338 0.8180928249017576 0.7703454457281987 0.8797428730579417 0.9109484124868522 0.8206373327765837 0.7913706572205998 1.0568515573406858 1.0 17.283504576865152 -7.76934812716499 24.99742387779799 1.0284258746664279 0.8579432590002242 0.5879848636778161 0.05703690601089659 143.62680744511607 453947.2880486217 0.055401261111458204 0.015336775480730199 1.7007946177512422e-08 7.76934812716499 -0.1704826156662037 TVRGS(ph)LER ddPTM_KYSE-520_SHP099_60min_R1 1 TVRGSLER 8 1 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 TVRGS(1)LER 99.28299999999999 0.0018612000000000001 104130000.0 130700.0 114370.0 133650.0 112190.0 112370.0 102240.0 88532.0 96339.0 141730.0 104350.0 True False 123449.81045600933 108875.49352713024 142265.29284756072 122852.50386884657 121212.87970215913 101601.88223599752 97481.67854905581 96004.82249469169 115995.40472255081 103425.5401830715 1.1936104973442079 1.0526944634218192 1.375533476506284 1.1878352643978247 1.17198207993502 0.982367431256864 0.9425300402251264 0.9282506267287118 1.121535401383736 1.0 16.658232967106823 -6.21636039546913 4.211124448839351 0.9862248133223463 1.2010503980596239 0.5696785864596063 0.08757417018589092 0.16362697970739165 6.381572454443965 0.030507048734891462 0.029697848803369512 6.076305551123936e-07 6.21636039546913 0.21482558473727753 TVS(ph)ASS(ph)TGDLPK ddPTM_KYSE-520_SHP099_60min_R1 3 TVSASSTGDLPK 12 0 P78362;P78362-2;H7C5L6 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 2 T(0.004)VS(0.995)AS(0.267)S(0.552)T(0.183)GDLPK;T(0.001)VS(0.999)AS(0.007)S(0.542)T(0.451)GDLPK;T(0.091)VS(0.907)AS(0.333)S(0.552)T(0.117)GDLPK 147.39 2.4664e-05 2997240000.0 7740600.0 7195400.0 6525800.0 6577300.0 7227900.0 7115900.0 6898600.0 7648200.0 9350200.0 7608800.0 True False 7311213.487496462 6849722.183484407 6946463.509649174 7202404.614462639 7796694.6088745715 7071487.028590923 7595977.811847868 7621670.179303305 7652439.379360707 7541391.95155683 0.9694779868837277 0.9082835406891117 0.9211115871275144 0.9550497654449308 1.033853519212065 0.9376898951832228 1.0072381677867532 1.0106450146421448 1.0147250571933146 1.0 22.846399402668073 -5.562086488551168 6.555868687708274 0.9983298039809692 0.9315937433663015 0.5604175494163548 0.02745355114663734 0.13677895540529766 15.972929385003884 0.00807164833066924 0.010551912142365588 2.7410282493359104e-06 5.562086488551168 -0.06673606061466764 TVS(ph)ASST(ph)GDLPK ddPTM_KYSE-520_SHP099_60min_R1 1 TVSASSTGDLPK 12 0 P78362;P78362-2;H7C5L6 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 2 T(0.027)VS(0.957)AS(0.057)S(0.157)T(0.802)GDLPK 106.29 0.0049865000000000005 649210000.0 2369000.0 2779500.0 2562500.0 2400400.0 2756600.0 2437600.0 2505700.0 2905200.0 3895500.0 2682800.0 True False 2237586.8475155802 2645968.64788544 2727682.8501449684 2628533.294293422 2973528.7370915026 2422386.0342181884 2759000.609275394 2895122.5392787764 3188175.3975636526 2659032.4791868143 0.8415041429655193 0.9950869982207327 1.0258178008337637 0.9885299690274112 1.1182746959152856 0.9110028001459398 1.0375956784548763 1.0887879564991862 1.1989982907386905 1.0 21.342469968661753 -3.208561241171088 0.7936912010360944 1.0542614838033668 4.033065649073663e-32 0.41863779945448854 0.07334107691568796 12.151800390427079 1.668257935278639 0.027274749547310795 16.666167246165656 0.0006186410849621783 3.208561241171088 -1.0542614838033668 TVS(ph)DNSLSNSR ddPTM_KYSE-520_SHP099_60min_R1 7 TVSDNSLSNSR 11 0 H0Y7W6;B7ZL14;Q96RU3-4;Q96RU3-3;Q96RU3-5;Q96RU3-2;Q96RU3 H0Y7W6 FNBP1 Formin-binding protein 1 1 T(0.074)VS(0.926)DNSLSNSR;TVS(1)DNSLSNSR;TVS(0.998)DNS(0.002)LSNSR;TVS(1)DNSLSNSR;TVS(0.992)DNS(0.008)LSNSR;T(0.006)VS(0.936)DNS(0.058)LSNSR;T(0.001)VS(0.97)DNS(0.029)LSNSR 303.7 3.0711999999999994e-29 11881100000.0 7642970.0 6876280.0 6427290.0 6003540.0 6615200.0 6447630.0 6578830.0 6558550.0 8379050.0 5991780.0 True False 7218999.218217035 6545933.187293293 6841603.397427611 6574114.636569886 7135778.604660701 6407387.949543093 7243882.339593427 6535799.920827076 6857625.7386614615 5938697.490734295 1.21558628461549 1.102250653027271 1.1520376998663515 1.1069960453158263 1.201573007514547 1.0789214233491538 1.2197762810608748 1.1005443417558134 1.1547356553117754 1.0 22.501715114876582 -12.889845895416443 0.43909524418088863 4.327716328597175e-06 1.1480001109613591 0.4575338797482522 0.04839564264648228 338.35089658362415 5.586428753524999 318.06032513535035 0.024584715143242095 1.2887067538804714e-13 12.889845895416443 1.1479957832450305 TVS(ph)DSIKK ddPTM_KYSE-520_SHP099_60min_R1 4 TVSDSIKK 8 1 Q9Y490 Q9Y490 TLN1 Talin-1 1 T(0.008)VS(0.974)DS(0.018)IKK;T(0.001)VS(0.947)DS(0.052)IKK;T(0.002)VS(0.99)DS(0.008)IKK;T(0.002)VS(0.619)DS(0.379)IKK 117.02 0.0010493 3666100000.0 4648080.0 4226630.0 4686770.0 4249020.0 4334310.0 4260250.0 4406920.0 4550010.0 5200770.0 4771560.0 True False 4390241.736682235 4023576.3504990316 4988886.6932971375 4652845.583285556 4675395.538149552 4233660.199490503 4852414.480994502 4534227.077290322 4256441.2687426815 4729287.69061751 0.9283092981194796 0.8507785133227256 1.054891776449686 0.983836443808735 0.9886045941813024 0.8952003930506728 1.0260349546129885 0.9587547584144286 0.9000174121754289 1.0 22.17319147538355 -4.74248254538415 24.99999825854237 0.9740875949228751 0.8895439090039561 0.3213217575480358 0.050155055520717334 287.949891177644 379738.3732147045 0.012564941560208388 0.033126438296522995 1.809328627045816e-05 4.74248254538415 -0.08454368591891903 TVS(ph)EPNLK ddPTM_KYSE-520_SHP099_60min_R1 5 TVSEPNLK 8 0 J3KPH8;Q8WUI4-3;Q8WUI4-4;Q8WUI4;Q8WUI4-7;Q8WUI4-6;Q8WUI4-5;Q8WUI4-8;H0YI41;F8VWY3;C9JEB6;C9JF80;C9JAH2 J3KPH8 HDAC7 Histone deacetylase;Histone deacetylase 7 1 TVS(1)EPNLK;TVS(1)EPNLK;T(0.001)VS(0.999)EPNLK;T(0.002)VS(0.998)EPNLK;TVS(1)EPNLK 114.89 0.0010238 6777770000.0 7559240.0 7176130.0 6342600.0 5474360.0 5946300.0 6883600.0 5910810.0 6738320.0 7913520.0 7228340.0 True False 7139913.888228659 6831377.943209277 6751454.1445188075 5994641.5284736445 6414239.980181092 6840636.899058228 6508332.358746495 6714946.34065571 6476624.251605164 7164302.531163426 0.9965958105721134 0.9535300768628925 0.9423742388252307 0.8367376311089646 0.8953055726332471 0.9548224505180636 0.9084390742066546 0.9372784456612353 0.9040132271680341 1.0 22.77239482945566 -9.703927471605445 14.049689439101988 1.000015842426409 0.9239934433083998 0.22992453439394456 0.04084850969560134 0.0 0.0 0.04182170184687385 0.010143252597514713 1.977299827147828e-10 9.703927471605445 -0.07602239911800912 TVS(ph)EPSLSGLLQIK ddPTM_KYSE-520_SHP099_60min_R1 1 TVSEPSLSGLLQIK 14 0 E7EPB1;E7EQS8;Q6N021-2;Q6N021-3;Q6N021;D6RE87 E7EPB1 TET2 Methylcytosine dioxygenase TET2 1 T(0.002)VS(0.998)EPSLSGLLQIK 154.6 1.3358000000000002e-06 136010000.0 161070.0 159160.0 105530.0 93759.0 103800.0 150070.0 94226.0 136520.0 153330.0 141760.0 True False 152135.1260149153 151513.71469596942 112332.63265396992 102669.82717032869 111968.46945878908 149133.3574643598 103751.28363714062 136046.4439840074 125489.13713475411 140504.116687611 1.0827805590434338 1.0783578322679082 0.7994970916313008 0.7307246904273919 0.7969052587102021 1.0614162843067052 0.7384216639560491 0.9682737217336163 0.893134949303725 1.0 17.100252875614643 -1.7897349600410872 11.60123895007506 0.9061724872648917 0.9848980684195117 0.0 0.1341678869332452 0.0 0.0 0.031849172859499335 0.0 0.016228001529278672 1.7897349600410872 0.07872558115461992 TVS(ph)FEALPIMR ddPTM_KYSE-520_SHP099_60min_R1 10 TVSFEALPIMR 11 0 O15084-2;O15084;O15084-4;O15084-1 O15084-2 ANKRD28 Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A 1 TVS(1)FEALPIMR;T(0.005)VS(0.995)FEALPIMR;TVS(1)FEALPIMR;TVS(1)FEALPIMR;T(0.011)VS(0.989)FEALPIMR;T(0.002)VS(0.998)FEALPIMR;T(0.003)VS(0.997)FEALPIMR;T(0.001)VS(0.999)FEALPIMR;TVS(1)FEALPIMR;T(0.001)VS(0.999)FEALPIMR 201.0 6.6408e-08 2532340000.0 1585430.0 1559368.0 1393408.0 1269696.0 1371828.0 1477472.0 1382275.0 1568529.0 1686628.0 1645321.0 True False 1497483.0374236503 1484453.6206209143 1483229.3092116257 1390367.5260919763 1479783.0589663924 1468250.5492075882 1522008.846703972 1563088.1389964207 1380378.87163188 1630744.7359803673 0.9182816932555645 0.9102918365261464 0.9095410682530527 0.8525966666733518 0.907427769850675 0.9003558416056506 0.9333213305079132 0.9585118409453133 0.8464714563693054 1.0 20.637099540854877 -6.752760872854644 11.637924115963632 0.931123480209728 0.8988719631133074 0.15569172874965376 0.03937343420960388 0.6569990098456605 854.9627356139193 0.014866853553160536 0.011078804251415043 1.767010487586415e-07 6.752760872854644 -0.0322515170964206 TVS(ph)LCDITITQMLEEDSNQGHLIGDFSK ddPTM_KYSE-520_SHP099_60min_R1 4 TVSLCDITITQMLEEDSNQGHLIGDFSK 28 0 P30307-4;P30307-3;P30307-2;P30307;H0Y999 P30307-4 CDC25C M-phase inducer phosphatase 3 1 T(0.134)VS(0.866)LCDITITQMLEEDSNQGHLIGDFSK;T(0.003)VS(0.997)LCDITITQMLEEDSNQGHLIGDFSK;T(0.008)VS(0.992)LCDITITQMLEEDSNQGHLIGDFSK;T(0.032)VS(0.968)LCDITITQMLEEDSNQGHLIGDFSK 253.21 9.008699999999999e-32 469462000.0 382136.0 460191.0 382961.0 444249.0 329729.0 405290.0 323198.0 375762.0 512330.0 394394.0 True False 360938.15431076987 438082.7335992265 407647.27881926514 486470.29139166727 355676.79639862257 402760.43477530783 355870.00794851227 374458.5693255101 419303.7867882909 390899.97599388903 0.9233516921894425 1.1207028920515336 1.0428429364386502 1.2444879029597902 0.9098920906666489 1.0303414159882276 0.9103863642961073 0.9579396068608714 1.072662605624836 1.0 18.576439970464634 -5.811729653662663 24.999989353818016 0.9771167461614523 1.0826963950947162 0.24817373899866713 0.08742178225981026 146.9431212957566 73046.50603329929 0.02631043184005534 0.029833269804522927 1.5426604532279756e-06 5.811729653662663 0.10557964893326388 TVS(ph)PDEITTRPMDK ddPTM_KYSE-520_SHP099_60min_R1 4 TVSPDEITTRPMDK 14 1 E9PPJ1;Q8NG31-3;Q8NG31-4;Q8NG31-2;Q8NG31 E9PPJ1 CASC5 Protein CASC5 1 TVS(1)PDEITTRPMDK;TVS(1)PDEITTRPMDK;T(0.001)VS(0.999)PDEITTRPMDK;T(0.036)VS(0.92)PDEIT(0.022)T(0.022)RPMDK 226.74 1.7115e-14 2989180000.0 2499340.0 2301340.0 1987530.0 2121220.0 2409590.0 2311360.0 2147240.0 2021130.0 2592170.0 2211450.0 True False 2360696.6278892322 2190780.1720182365 2115649.3639604375 2322820.111031949 2599211.024308318 2296933.944884542 2364303.974242921 2014119.1717652902 2121497.2712880448 2191858.2734820656 1.0770297771757587 0.9995081335883472 0.9652309136755636 1.0597492270071973 1.1858481251979476 1.0479390810408327 1.0786755707917657 0.9189094003626372 0.9678989271134566 1.0 21.0637230853439 -7.255232943978458 24.950884136706158 0.9575531217128017 1.057700692662432 0.37524661388651315 0.05716113783622892 533.7746495482501 2145871.568761268 0.030260132152907657 0.016931000300416416 5.556061650030092e-08 7.255232943978458 0.10014757094963023 TVS(ph)PGSVS(ph)PIHGQGQVVENLK ddPTM_KYSE-520_SHP099_60min_R1 2 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 2 T(0.005)VS(0.995)PGS(0.291)VS(0.709)PIHGQGQVVENLK;T(0.025)VS(0.975)PGS(0.056)VS(0.945)PIHGQGQVVENLK 208.89 5.0769e-19 3525510000.0 3025980.0 2612620.0 2619730.0 2699490.0 3195120.0 2773530.0 2494650.0 2754990.0 3554430.0 3023120.0 True False 2858122.8572584237 2487105.813577431 2788601.987516204 2956048.717968737 3446557.766254002 2756219.370481282 2746833.5674377843 2745433.5827095006 2909035.1118886354 2996337.5087517733 0.9538721352018426 0.8300486197943434 0.930670186309516 0.9865539877716178 1.1502568573090364 0.91986278662896 0.9167303614545318 0.916263129467416 0.9708636304794961 1.0 21.514768708066715 -5.031238230055972 5.143421238849729 0.9776247118464992 0.8889041856270213 0.20662132570057534 0.06998813041726615 0.2980668066187283 21.23155716343265 0.020340488164183927 0.0383947418379234 9.305972609813255e-06 5.031238230055972 -0.0887205262194779 TVS(ph)PPIR ddPTM_KYSE-520_SHP099_60min_R1 5 TVSPPIR 7 0 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 TVS(1)PPIR;TVS(1)PPIR;TVS(1)PPIR;TVS(1)PPIR;T(0.001)VS(0.999)PPIR 150.36 0.0013399 40731600000.0 1070000.0 958230.0 904420.0 770940.0 871570.0 1001210.0 849726.0 876660.0 1081940.0 938130.0 True False 1010644.9670078822 912195.1924674475 962720.3603231653 844209.9058084376 940157.6004450541 994961.0770100083 935624.5966065926 873619.0710739817 885486.9694878747 929818.8980540961 1.0869266790801273 0.981046087981723 1.0353848070177156 0.9079293909547127 1.0111190495402864 1.0700589965338845 1.0062439025111733 0.9395583085074651 0.9523219751082729 1.0 19.826590222569298 -7.188758464827845 7.10339148060835 0.9596038319979275 1.0118038046299236 0.18150264803893235 0.048410776986054296 0.4444027913907676 37.523602412681264 0.02339583580864033 0.013405690331982481 6.475026276376485e-08 7.188758464827845 0.05219997263199605 TVS(ph)PPIRK ddPTM_KYSE-520_SHP099_60min_R1 5 TVSPPIRK 8 1 Q9UHB6;Q9UHB6-4;F8VQE1;Q9UHB6-2;Q9UHB6-5;F8VS07;Q9UHB6-3 Q9UHB6 LIMA1 LIM domain and actin-binding protein 1 1 TVS(1)PPIRK;T(0.035)VS(0.965)PPIRK;T(0.001)VS(0.999)PPIRK;T(0.404)VS(0.596)PPIRK;T(0.01)VS(0.99)PPIRK 86.18 0.0033061 22547300000.0 11172830.0 9652490.0 10478810.0 9255080.0 9605510.0 9387110.0 9437280.0 9217230.0 11197560.0 9451660.0 True False 10553050.847415583 9188769.891717121 11154290.859288808 10134680.020558722 10361408.989124205 9328521.564518338 10391292.361377044 9185257.58044765 9164365.371516578 9367925.645680217 1.1265088181268663 0.9808756216969219 1.1906895166735583 1.081848896316985 1.106051582924562 0.9957937239627804 1.109241549773479 0.9805006922405709 0.9782705070617735 1.0 23.159298194369736 -7.07702225592193 1.0218758135142159 0.9794835108999879 1.0916273706223811 0.3387465201620563 0.059343272181805726 0.6358860276458085 1.210524403248547 0.04820331829737942 0.021470961448491886 8.374863630719824e-08 7.07702225592193 0.11214385972239327 TVS(ph)PSTIR ddPTM_KYSE-520_SHP099_60min_R1 3 TVSPSTIR 8 0 Q96JH7 Q96JH7 VCPIP1 Deubiquitinating protein VCIP135 1 T(0.018)VS(0.953)PS(0.027)T(0.001)IR;T(0.035)VS(0.962)PS(0.003)TIR;T(0.06)VS(0.9)PS(0.038)T(0.002)IR 125.83 0.00086922 3046090000.0 2895180.0 2754830.0 2294860.0 1915310.0 2032840.0 2649040.0 2015590.0 2276670.0 2826040.0 2582600.0 True False 2734578.594001757 2622483.831715866 2442790.347505827 2097340.486541049 2192812.9427225892 2632506.358748502 2219345.5074627423 2268772.763148774 2312902.3746709763 2559720.1732323943 1.0683115375648866 1.0245197342818197 0.9543192935894593 0.8193631899585899 0.8566611950999012 1.028435211894351 0.8670266112174951 0.8863362436542374 0.9035762576150117 1.0 21.28755467378559 -4.798376738082437 2.9343025273966 0.9042870973911636 1.0559724274828752 0.4473199843157537 0.060513182911601064 0.22119906769636602 3.8120557664865236 0.016448438116793716 0.04640934372797143 1.590828130270962e-05 4.798376738082437 0.1516853300917116 TVS(ph)SPIPYTPS(ph)PSSSRPISPGLSY(ph)ASHTVGFTPPTSLTR ddPTM_KYSE-520_SHP099_60min_R1 1 TVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTR 39 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 3 T(0.069)VS(0.465)S(0.465)PIPY(0.002)T(0.002)PS(0.946)PS(0.075)S(0.195)S(0.177)RPIS(0.121)PGLS(0.082)Y(0.282)AS(0.062)HT(0.052)VGFT(0.003)PPTSLTR 118.17 0.00011399 240890000.0 69724.0 100570.0 88056.0 149500.0 84228.0 75153.0 64831.0 62837.0 104860.0 66366.0 True False 65856.27072865184 95738.4662413523 93732.2306545815 163708.43505118598 90856.2644082359 74683.94225041015 71384.7501695865 62619.03311326608 85820.06730548687 65778.04887196678 1.0011891787309977 1.4554774409271667 1.42497736345184 2.4888004107545836 1.381255083821085 1.135393091330182 1.0852366616792306 0.9519746205174079 1.304691592061825 1.0 16.005318594708395 -6.131263256177922 4.393565296638177 1.0940741263092928 1.6066629459844932 0.29380122944822384 0.35930002891881807 0.3071909547843783 9.572736916980192 0.12681054680662698 0.12750007664626012 7.391570845663582e-07 6.131263256177922 0.5125888196752004 TVS(ph)SPIPYTPSPSSSR ddPTM_KYSE-520_SHP099_60min_R1 1 TVSSPIPYTPSPSSSR 16 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 TVS(0.843)S(0.157)PIPYTPSPSSSR 253.13 9.7185e-24 337690000.0 165090.0 189230.0 142620.0 119850.0 131340.0 179140.0 146210.0 211120.0 213680.0 210660.0 True False 155932.12860124404 180139.10675997942 151813.51340006842 131240.50796578344 141675.71077762387 178021.9208113912 160990.33367208982 210387.67399577843 174881.09843445008 208793.71629100014 0.7468238573996078 0.8627611499041274 0.7270980951767858 0.6285654103827092 0.6785439394170631 0.8526210652971872 0.7710497065329028 1.0076341267979385 0.8375783598329878 1.0 17.67171876866154 -6.992851721012143 1.5251304269956625 0.946339797804409 0.7367189248878251 0.5419059377224694 0.08096053284244716 0.33842100878608455 1.527010908203065 0.05656028444225284 0.027382354925731843 1.0165957248068076e-07 6.992851721012143 -0.20962087291658393 TVS(ph)SSGCEGKR ddPTM_KYSE-520_SHP099_60min_R1 5 TVSSSGCEGKR 11 1 A0A2R8Y5P9;Q8TF72 A0A2R8Y5P9 SHROOM3 Protein Shroom3 1 T(0.01)VS(0.949)S(0.04)S(0.001)GCEGKR;T(0.008)VS(0.925)S(0.065)S(0.003)GCEGKR;T(0.006)VS(0.89)S(0.082)S(0.022)GCEGKR;T(0.002)VS(0.483)S(0.483)S(0.032)GCEGKR;T(0.001)VS(0.468)S(0.468)S(0.062)GCEGKR 129.34 9.494399999999999e-05 3933740000.0 3465980.0 2949700.0 2842300.0 2730380.0 2862140.0 3179790.0 3124480.0 3470860.0 4499510.0 3480750.0 True False 3273715.1801401675 2807991.9844100317 3025519.2058407967 2989874.494281318 3087374.1346510467 3159943.7511267876 3440332.9303862313 3458820.396764811 3682512.407416663 3449913.2629825254 0.9489268078902277 0.8139311832966089 0.876984137051947 0.866652076839899 0.8949135526908709 0.9159487529825452 0.9972230221846181 1.0025818428184439 1.0674217369259453 1.0 21.7181286597257 -6.722179856457844 1.4731559740274436 1.0301036209751377 0.8729675097670492 0.7735376573745575 0.035272574642955884 0.17438848968401233 0.7708160985574939 0.019290465337277903 0.011862333632206545 1.8959205919135729e-07 6.722179856457844 -0.15713611120808857 TVSASS(ph)TGDLPK ddPTM_KYSE-520_SHP099_60min_R1 8 TVSASSTGDLPK 12 0 P78362;P78362-2;H7C5L6 P78362 SRPK2 SRSF protein kinase 2;SRSF protein kinase 2 N-terminal;SRSF protein kinase 2 C-terminal 1 TVSAS(0.036)S(0.828)T(0.136)GDLPK;TVSAS(0.022)S(0.972)T(0.006)GDLPK;TVS(0.002)AS(0.169)S(0.415)T(0.415)GDLPK;TVSAS(0.004)S(0.766)T(0.229)GDLPK;TVSAS(0.035)S(0.961)T(0.004)GDLPK;TVSAS(0.001)S(0.995)T(0.003)GDLPK;TVSAS(0.005)S(0.977)T(0.018)GDLPK;T(0.004)VS(0.002)AS(0.118)S(0.806)T(0.07)GDLPK 268.93 9.5246e-22 6125040000.0 12836990.0 13360310.0 10553770.0 9364480.0 9508720.0 12290680.0 9621790.0 11546070.0 14026860.0 11947000.0 True False 12124896.57479488 12718460.653365849 11234082.900829038 10254477.363666413 10257002.166783981 12213969.307123732 10594454.432821129 11506019.378043005 11479935.812365456 11841158.874625348 1.0239619874349932 1.0740891823198562 0.9487317094362085 0.8660028526127569 0.8662160752495192 1.0314842859930955 0.8947143218831557 0.9716970695072321 0.9694942812536732 1.0 23.497306946264477 -4.804863550579268 7.480980911690031 0.9380846572067785 1.0488935799063717 0.3835559641209958 0.053163456686515995 0.1861525225740313 26.536011090511888 0.014115820852823395 0.030136661598502947 1.5672433993274168e-05 4.804863550579268 0.1108089226995932 TVSGPGTPEPRPAT(ph)PGASSVEQLRK ddPTM_KYSE-520_SHP099_60min_R1 2 TVSGPGTPEPRPATPGASSVEQLRK 25 2 Q9H3U1 Q9H3U1 UNC45A Protein unc-45 homolog A 1 TVSGPGTPEPRPAT(0.981)PGAS(0.01)S(0.01)VEQLRK;TVSGPGTPEPRPAT(0.983)PGAS(0.008)S(0.008)VEQLRK 95.244 0.003793 817500000.0 296090.0 374340.0 283500.0 163871.0 217060.0 279140.0 167032.0 182531.0 407080.0 242320.0 True False 279665.2974592181 356356.1445042049 301774.8636160379 179445.25057038717 234141.38709754095 277397.7837182743 183917.2246352266 181897.8425640555 333164.5336517034 240173.23332210747 1.1644315796179752 1.483746292519946 1.2564883248722125 0.7471492476004802 0.974885435228842 1.1549904203781247 0.7657690330069657 0.7573610100010764 1.387184279627368 1.0 17.873715849855 -5.094312393086923 6.542670160126513 0.959937828529595 1.3351896789174518 0.3694977906436092 0.19948992944070384 0.22958030799649579 13.347654382045004 0.05321509998106698 0.09354833895941918 8.047993313966766e-06 5.094312393086923 0.3752518503878568 TVSLGAGAK ddPTM_KYSE-520_SHP099_60min_R1 1 TVSLGAGAK 9 0 P06748;P06748-3;P06748-2;E5RGW4 P06748 NPM1 Nucleophosmin 0 101.43 0.01782 0.0 146250.0 173990.0 118900.0 137600.0 199740.0 211010.0 130550.0 162120.0 198780.0 160920.0 False True 138137.22095785296 165631.25923568557 126564.48424672648 150677.46262905153 215458.4016348603 209693.0083198149 143747.26804521782 161557.64355909266 162686.5628360167 159494.3739938657 0.8660946307934714 1.038477126735868 0.7935357284238393 0.9447196089490073 1.3508840233019568 1.3147360817120726 0.9012685804876507 1.0129363156427467 1.0200144291125515 1.0 17.283146009685257 -5.547604820812411 24.984833429931417 1.1056392658271625 0.9059211099580826 0.29891455898329833 0.143005828776067 300.13422900367044 303273.35426088626 0.04563114393550036 0.05891180698985783 2.833969547335066e-06 5.547604820812411 -0.19971815586907993 TVSLGAGAKDELHIVEAEAMNYEGS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 32 TVSLGAGAKDELHIVEAEAMNYEGSPIK 28 1 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 1 TVSLGAGAKDELHIVEAEAMNY(0.016)EGS(0.984)PIK;TVSLGAGAKDELHIVEAEAMNY(0.029)EGS(0.971)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNY(0.001)EGS(0.999)PIK;TVSLGAGAKDELHIVEAEAMNY(0.001)EGS(0.999)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNY(0.068)EGS(0.932)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNY(0.002)EGS(0.998)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNY(0.001)EGS(0.999)PIK;TVSLGAGAKDELHIVEAEAMNY(0.003)EGS(0.997)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNY(0.009)EGS(0.991)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIK 238.65 5.5006e-31 21371438000.0 7267708.6 8713525.5 8577172.8 9520135.4 7065340.4 6858548.2 6574234.4 7210004.5 10437977.0 6108885.1 True False 6864554.316140086 8294914.6557115745 9130071.082649708 10424926.20608291 7621342.493192185 6815741.456634525 7238822.171496683 7184994.677217201 8542703.49678739 6054765.130654683 1.1337441119533307 1.3699812423301498 1.507914986896032 1.7217721878760464 1.2587346212004282 1.125682220459237 1.195557881320158 1.1866677768953044 1.4109058423317724 1.0 22.52963956699577 -5.981531807147754 24.999497173711884 1.1957268178755212 1.4411650902743647 0.33731208376537547 0.16503636879077524 295.12712780424874 399497.32452344126 0.05290963232630711 0.05998432019771725 1.0434417096530375e-06 5.981531807147754 0.24543827239884353 TVSLGAGAKDELHIVEAEAMNYEGS(ph)PIKVTLATLK ddPTM_KYSE-520_SHP099_60min_R1 6 TVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLK 35 2 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 1 TVSLGAGAKDELHIVEAEAMNY(0.015)EGS(0.985)PIKVTLATLK;TVSLGAGAKDELHIVEAEAMNY(0.008)EGS(0.991)PIKVT(0.001)LATLK;TVSLGAGAKDELHIVEAEAMNY(0.023)EGS(0.976)PIKVT(0.001)LATLK;TVSLGAGAKDELHIVEAEAMNYEGS(1)PIKVTLATLK;TVSLGAGAKDELHIVEAEAMNY(0.034)EGS(0.806)PIKVT(0.16)LATLK;TVSLGAGAKDELHIVEAEAMNY(0.022)EGS(0.978)PIKVT(0.001)LATLK 195.07 9.306900000000001e-16 1501471000.0 851089.0 1232514.0 1338965.0 1134365.0 893167.0 847639.0 688917.0 780109.0 1469964.0 613237.0 True False 803877.3965661412 1173302.1773987694 1425276.8263197485 1242174.7085407267 963454.1614749337 842348.5705852787 758559.4535419937 777402.9839578089 1203055.5923769118 607804.197271166 1.32259270366226 1.9303949901407342 2.344960486812622 2.0437086715058377 1.5851390395139011 1.3858880448130122 1.248032601531328 1.2790352344522853 1.9793472927272004 1.0 19.213247112050208 -5.937555228998673 3.881912069272666 1.3939271643842623 1.9406729639526288 0.36282533163927067 0.3304150411709402 0.2519566934751852 7.7200712047076285 0.10937618301007233 0.123421766580502 1.154635141014816e-06 5.937555228998673 0.5467457995683664 TVSLGAGAKDELHIVEAEAMNYEGSPIK ddPTM_KYSE-520_SHP099_60min_R1 1 TVSLGAGAKDELHIVEAEAMNYEGSPIK 28 1 P06748;P06748-3;P06748-2 P06748 NPM1 Nucleophosmin 0 77.873 0.015059000000000001 81910000.0 135510.0 138310.0 98933.0 183130.0 117400.0 80721.0 87047.0 107200.0 123890.0 64930.0 False True 127992.99016751211 131665.37999245749 105310.37947839678 200534.62013995787 126638.71208537409 80217.1902970654 95846.5602568525 106828.14822066811 101394.69901274831 64354.77071477564 1.9888656077229305 2.0459303720621844 1.6364036155942339 3.116080096512811 1.9678216654153702 1.2464839732332045 1.4893466201853232 1.6599880169589467 1.575558391189613 1.0 15.973759481086804 -6.106910030088927 5.483358691578304 1.447326257644058 2.1901204656994104 0.4858967944900997 0.3919709061242577 0.21893638570883964 9.369977514556755 0.13199875233237263 0.13276656516757043 7.817897460167338e-07 6.106910030088927 0.7427942080553525 TVSLPLS(ph)SPNIK ddPTM_KYSE-520_SHP099_60min_R1 1 TVSLPLSSPNIK 12 0 Q8IWZ3-6;H0Y4P6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 TVSLPLS(0.5)S(0.5)PNIK 104.59 0.0022982 274160000.0 864960.0 962400.0 722570.0 604150.0 645850.0 981350.0 660310.0 758860.0 936800.0 983850.0 True False 816978.9445449874 916164.8594081501 769148.0183528769 661568.2343556788 696674.7206161738 975225.030636701 727060.57880458 756227.6917792555 766700.7348062193 975133.8544237174 0.8378121022449825 0.93952728156442 0.7887614760410779 0.6784383819251676 0.7144400919480877 1.000093501228134 0.7456007967585709 0.7755116780620538 0.7862517861810085 1.0 19.895240742384935 -10.342869096435996 6.06020129312668 1.0000200892823048 0.8071083682106829 0.27870296424762886 0.09296088526897807 2.634982837329885e-05 2.8571859959211213e-06 0.09399540258005606 0.022794861368098635 4.5407846280948217e-11 10.342869096435996 -0.1929117210716219 TVSLPLSS(ph)PNIK ddPTM_KYSE-520_SHP099_60min_R1 5 TVSLPLSSPNIK 12 0 Q8IWZ3-6;H0Y4P6;Q8IWZ3;Q8IWZ3-4;H0Y785;H0Y472;A0A0A0MQZ8;H0Y7Y3 Q8IWZ3-6 ANKHD1 Ankyrin repeat and KH domain-containing protein 1 1 TVSLPLS(0.307)S(0.693)PNIK;TVSLPLSS(1)PNIK;TVSLPLS(0.003)S(0.997)PNIK;TVSLPLS(0.008)S(0.992)PNIK;TVSLPLS(0.158)S(0.842)PNIK 291.75 1.0669e-29 5090770000.0 8979330.0 9977600.0 7180740.0 5543720.0 6139000.0 8893180.0 5947370.0 7499110.0 8891250.0 8576730.0 True False 8481228.665049424 9498261.119317077 7643621.989990227 6070593.4820198035 6622104.373868063 8837674.364862373 6548588.200337706 7473097.337715427 7276823.130172716 8500746.844794964 0.9977039453001131 1.117344310180569 0.8991706410679012 0.7141247225515072 0.7790026564457451 1.03963504927496 0.7703544547203436 0.8791106798211771 0.8560216252797058 1.0 23.019158166097967 -4.8800425076589935 5.635569084754512 0.8541409454284987 1.0552868212307804 0.37746680111578 0.09803285612823702 0.19053319650787237 8.546972344428635 0.025516689313660076 0.054890806192899204 1.3181277171941736e-05 4.8800425076589935 0.20114587580228172 TVSPDRLELEAAQK ddPTM_KYSE-520_SHP099_60min_R1 1 TVSPDRLELEAAQK 14 1 Q14974;J3QR48 Q14974 KPNB1 Importin subunit beta-1 0 127.18 6.0918e-05 449300000.0 224070.0 234340.0 196940.0 274860.0 246210.0 240570.0 180620.0 201220.0 244000.0 207270.0 False True 211640.39042752914 223081.95464848884 209635.0675151411 300982.6117603279 265585.3262567287 239068.51339508942 198878.83228132696 200522.0147851011 199695.75073945094 205433.74905361995 1.0302123745611498 1.0859070414484941 1.020450965242447 1.4651079150669097 1.2928028012934167 1.163725602518652 0.9680923080920745 0.9760909086693598 0.9720688623918783 1.0 17.648313684294784 -6.736212896028915 5.978311589098445 0.9764481062289869 1.1846987468204306 0.38040802000198914 0.12320436029510937 0.20041397237074143 22.00115516434865 0.05424491633537494 0.04032068019750144 1.835638272272312e-07 6.736212896028915 0.20825064059144371 TVSPGS(ph)VSPIHGQGQVVENLK ddPTM_KYSE-520_SHP099_60min_R1 2 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 1 TVS(0.001)PGS(0.542)VS(0.457)PIHGQGQVVENLK;TVSPGS(0.5)VS(0.5)PIHGQGQVVENLK 315.06 5.700899999999999e-54 2397340000.0 1291800.0 1517730.0 1087760.0 1146830.0 1049720.0 1458270.0 1048180.0 1320320.0 1717260.0 1426820.0 True False 1220141.2788605436 1444815.9726408257 1157878.7500775368 1255824.3783929867 1132326.991910213 1449168.3960122103 1154140.2636509892 1315740.1180850053 1405448.8726017612 1414179.4848491643 0.8627909624857013 1.0216637902896244 0.8187636452674433 0.8880233321493363 0.8006953884152734 1.0247414925318181 0.8161200724631423 0.9303911788999977 0.9938263761135425 1.0 20.43153380507892 -7.653983894289075 3.8097437541153236 0.9979503803588936 0.8931486873890351 0.24299891528124795 0.07415869450861351 0.3259067520271295 8.513283042344863 0.05682292054972712 0.01844986390946705 2.2182786826293533e-08 7.653983894289075 -0.10480169296985853 TVSPGSVS(ph)PIHGQGQVVENLK ddPTM_KYSE-520_SHP099_60min_R1 4 TVSPGSVSPIHGQGQVVENLK 21 0 A0A087WVF7;Q9NZM3-4;Q9NZM3-3;Q9NZM3-2;Q9NZM3 A0A087WVF7 ITSN2 Intersectin-2 1 TVSPGS(0.077)VS(0.923)PIHGQGQVVENLK;TVS(0.001)PGS(0.025)VS(0.974)PIHGQGQVVENLK;TVSPGS(0.125)VS(0.875)PIHGQGQVVENLK;TVSPGS(0.384)VS(0.616)PIHGQGQVVENLK 411.11 8.109499999999998e-108 10662440000.0 4130540.0 5269290.0 3415340.0 3997480.0 3395710.0 4273520.0 3195670.0 4235100.0 5131800.0 4224300.0 True False 3901410.712172655 5016145.399034457 3635498.281137211 4377399.297313814 3662933.058053027 4246847.376498249 3518719.5103336736 4220409.426579769 4199994.482150467 4186875.988455672 0.9318190275828278 1.1980640011467503 0.8683080872615392 1.0455048846403536 0.8748606522267928 1.0143236599813166 0.8404164632618012 1.0080091787329162 1.003133241522072 1.0 21.997442756690763 -4.7770371876565525 24.99997749955976 0.9552422795189514 1.0649416324629002 0.1867515205793231 0.09020314599071054 312.37407701729296 500670.6016870816 0.02169519594410424 0.04540475593157887 1.670947528718153e-05 4.7770371876565525 0.10969935294394884 TVSS(ph)PIPYT(ph)PSPSSSRPIS(ph)PGLSYASHTVGFT(ph)PPTSLTR ddPTM_KYSE-520_SHP099_60min_R1 1 TVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTR 39 1 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 4 T(0.035)VS(0.165)S(0.799)PIPY(0.121)T(0.507)PS(0.348)PS(0.015)S(0.015)S(0.018)RPIS(0.97)PGLS(0.012)Y(0.004)AS(0.019)HT(0.042)VGFT(0.922)PPT(0.003)S(0.003)LT(0.002)R 145.29 6.2575e-07 331830000.0 42500.0 63485.0 59180.0 90234.0 45075.0 54369.0 43757.0 35183.0 57417.0 39012.0 True False 40142.44027835046 60435.08530707229 62994.83749134789 98809.81223015873 48622.14605833248 54029.662903843455 48180.38458716657 35060.95838477391 46991.52016478302 38666.38403087675 1.038174147504846 1.5629877688798701 1.6291887403033043 2.5554448575086544 1.2574784862092518 1.397329082044457 1.246053537064456 0.9067555517158328 1.215306818637561 1.0 15.238792233583776 -6.5153895683135845 1.6549765419443743 1.0652652413756407 1.6661462559795628 0.308143683036198 0.3740994953895341 0.4748354384865679 2.6246039824397687 0.18892916295001116 0.14164435327543115 3.052182034302846e-07 6.5153895683135845 0.6008810146039221 TVSS(ph)PIPYTPSPSSSR ddPTM_KYSE-520_SHP099_60min_R1 5 TVSSPIPYTPSPSSSR 16 0 Q16204 Q16204 CCDC6 Coiled-coil domain-containing protein 6 1 TVS(0.001)S(0.999)PIPYTPSPSSSR;TVSS(1)PIPYTPSPSSSR;TVSS(1)PIPYTPSPSSSR;TVS(0.303)S(0.697)PIPYTPSPSSSR;TVSS(1)PIPYTPSPSSSR 350.55 3.6510999999999993e-59 4664670000.0 3639040.0 3897950.0 2672140.0 2726920.0 2671540.0 4100700.0 3434860.0 4348100.0 4106750.0 4472220.0 True False 3437175.1969536073 3710686.631057765 2844390.4199751657 2986085.6569216056 2881774.9990166994 4075106.0102225705 3782089.1698031174 4333017.455954165 3361067.7227427866 4432599.610134509 0.7754310109794249 0.8371355316130532 0.6416980260233456 0.6736646481884682 0.6501320336779189 0.9193489980248655 0.853244033401056 0.9775341418266915 0.7582610698828252 1.0 22.079721621301463 -6.27000044983974 24.93840812549809 0.897246440055146 0.7159267747185857 0.5575561845653546 0.08282713612541626 497.1907823898577 1448313.3769877914 0.029207747349733384 0.026167928953432656 5.370312401160781e-07 6.27000044983974 -0.1813196653365603 TVSS(ph)PPT(ph)SPRPGSAATVSASTSNIIPPR ddPTM_KYSE-520_SHP099_60min_R1 8 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 2 T(0.019)VS(0.221)S(0.669)PPT(0.544)S(0.544)PRPGS(0.001)AATVSASTSNIIPPR;T(0.045)VS(0.24)S(0.711)PPT(0.522)S(0.479)PRPGS(0.001)AATVSASTSNIIPPR;T(0.027)VS(0.151)S(0.823)PPT(0.527)S(0.472)PRPGSAATVSASTSNIIPPR;T(0.039)VS(0.169)S(0.792)PPT(0.529)S(0.47)PRPGS(0.001)AATVSASTSNIIPPR;TVS(0.011)S(0.989)PPT(0.604)S(0.395)PRPGSAATVSASTSNIIPPR;T(0.008)VS(0.093)S(0.899)PPT(0.535)S(0.465)PRPGSAATVSASTSNIIPPR;T(0.018)VS(0.121)S(0.857)PPT(0.528)S(0.477)PRPGSAATVSASTSNIIPPR;T(0.013)VS(0.122)S(0.864)PPT(0.534)S(0.468)PRPGSAATVSASTSNIIPPR 147.26 1.1117e-06 45229440000.0 4854090.0 4406920.0 4488080.0 4486400.0 4384470.0 4069640.0 4038410.0 4451820.0 5393700.0 4316560.0 True False 4584823.951311479 4195204.948278226 4777388.8179819 4912786.107114658 4729502.844778189 4044239.8672036924 4446651.893883483 4436377.6754826 4414340.044112197 4278318.6366328625 1.0716415350773976 0.9805732823069838 1.116651007962749 1.148298320992084 1.1054582995016051 0.9452872052528104 1.0393456569151434 1.0369441952023783 1.0317931923804504 1.0 22.02861250352682 -6.2316351371659495 24.944251281609787 1.0147750154184865 1.0840772234620673 0.37130844876403946 0.04789773795013881 887.6851165234151 742936.770263656 0.01721017361200008 0.017208152032215186 5.86630802345727e-07 6.2316351371659495 0.06930220804358078 TVSS(ph)PPTS(ph)PRPGSAATVSASTSNIIPPR ddPTM_KYSE-520_SHP099_60min_R1 2 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 2 T(0.002)VS(0.107)S(0.891)PPT(0.187)S(0.813)PRPGSAATVSASTSNIIPPR;T(0.011)VS(0.216)S(0.773)PPT(0.262)S(0.738)PRPGSAATVSASTSNIIPPR 153.69 3.7533e-07 15491000000.0 2076470.0 1994900.0 1927650.0 1846390.0 1853130.0 1834720.0 1908770.0 2037310.0 2471180.0 1770480.0 True False 1961284.069759679 1899062.0095940512 2051909.403349048 2021870.350462604 1998960.7881326168 1823268.83192517 2101727.099400004 2030243.0471217285 2022476.0053783464 1754794.9246125973 1.117671382707394 1.0822130739939901 1.1693157841803332 1.1521975144240677 1.139142107203167 1.039021031091533 1.1977052531446077 1.1569688392904038 1.1525426572708173 1.0 20.74287100809802 -10.064032610257547 10.820118970951267 1.0000000213856364 1.1340263685731224 0.4665157837281365 0.04301631276037872 0.0 0.0 0.04238850180035376 0.010280721778502528 8.629137509589538e-11 10.064032610257547 0.13402634718748607 TVSS(ph)PPTSPRPGSAATVSASTSNIIPPR ddPTM_KYSE-520_SHP099_60min_R1 4 TVSSPPTSPRPGSAATVSASTSNIIPPR 28 1 O76094-2;O76094 O76094-2 SRP72 Signal recognition particle subunit SRP72 1 TVS(0.126)S(0.874)PPTSPRPGSAATVSASTSNIIPPR;TVS(0.006)S(0.982)PPT(0.007)S(0.005)PRPGS(0.001)AATVSASTSNIIPPR;TVS(0.078)S(0.407)PPT(0.407)S(0.105)PRPGS(0.003)AATVSASTSNIIPPR;TVS(0.007)S(0.985)PPT(0.006)S(0.001)PRPGSAATVSASTSNIIPPR 182.56 1.0138e-11 5139090000.0 751958.0 771865.0 689966.0 640255.0 511428.0 750217.0 566939.0 726931.0 838455.0 664088.0 True False 710245.390748891 734783.446807014 734442.3123446319 701104.6427003158 551674.4739727313 745534.6174241334 624250.726911435 724409.44602797 686212.7077305168 658204.696972646 1.079064604089885 1.116344885089069 1.11582660488847 1.065177209954569 0.8381503148034478 1.1326789687967185 0.948414269576958 1.100583829559143 1.0425521283678028 1.0 19.328176796060067 -5.528867255438653 24.995507648592056 1.0123701528256592 1.1025881085887672 0.2337867052699144 0.07660326703375085 228.51835915555804 953808.4643309908 0.02200190958240633 0.028483527831767753 2.9589167379599867e-06 5.528867255438653 0.09021795576310798 TVT(ph)PASS(ph)AKT(ph)SPAK ddPTM_KYSE-520_SHP099_60min_R1 2 TVTPASSAKTSPAK 14 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 3 T(0.047)VT(0.953)PAS(0.211)S(0.789)AKT(0.852)S(0.148)PAK;T(0.119)VT(0.881)PAS(0.45)S(0.55)AKT(0.626)S(0.374)PAK 181.81 2.7961e-09 0.0 1226570.0 1239250.0 1085540.0 1106070.0 1122550.0 969470.0 1003750.0 1214560.0 1399970.0 1128510.0 True False 1158529.7169933252 1179714.5698478275 1155515.645325411 1211190.5602479281 1210888.2985641973 963419.1781233639 1105218.8456559735 1210346.9748404347 1145770.7383717578 1118512.2793674935 1.035777378902323 1.0547175847858759 1.0330826640355193 1.0828585278767286 1.0825882924136885 0.8613398313947586 0.9881150757513031 1.0821043247954978 1.0243702814060107 1.0 20.09314966415245 TVT(ph)PASSAK ddPTM_KYSE-520_SHP099_60min_R1 7 TVTPASSAK 9 0 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 1 T(0.008)VT(0.989)PAS(0.002)S(0.001)AK;T(0.055)VT(0.942)PAS(0.002)S(0.001)AK;T(0.002)VT(0.997)PAS(0.001)SAK;T(0.028)VT(0.97)PAS(0.002)SAK;TVT(1)PASSAK;T(0.002)VT(0.998)PASSAK;T(0.028)VT(0.971)PAS(0.001)SAK 152.7 0.0011283 26018580000.0 38591000.0 43491700.0 32012000.0 26400800.0 27627500.0 37868100.0 29517700.0 33654500.0 40402200.0 35536500.0 True False 36450280.300748736 41402293.4496274 34075544.74101099 28909924.094310038 29801627.07102787 37631751.14144152 32501637.18099065 33537760.394519314 33066178.93657967 35221674.25697864 1.0348821022761763 1.1754777228235869 0.9674595390439011 0.8207992579620764 0.8461161401242342 1.0684259603015709 0.9227737711687839 0.9521909762104599 0.9388020198962607 1.0 25.069960153302024 -4.890900315384123 6.20780130921873 0.9319878351968107 1.103181230630083 0.45377026464239445 0.07319487751695586 0.17482903194012728 8.861716466531133 0.01967245433686558 0.04185756608825703 1.2855817086206598e-05 4.890900315384123 0.17119339543327228 TVTAMDVVYALK ddPTM_KYSE-520_SHP099_60min_R1 3 TVTAMDVVYALK 12 0 P62805 P62805 HIST1H4A Histone H4 0 ;; 204.64 1.1297000000000001e-07 480956000.0 482341.0 761732.0 688435.0 533297.0 713853.0 609698.0 602439.0 426597.0 948567.0 460584.0 False True 455584.58320705517 725137.251336957 732812.6216349462 583981.3865384099 770029.1698320314 605892.6486260096 663339.4133580463 425117.23457548826 776331.1442281508 456503.58408892975 0.9979868703907141 1.5884590540163113 1.6052724385449506 1.279248196274066 1.686797643371897 1.3272462029739025 1.4530869777986752 0.9312462144715008 1.700602517234381 1.0 18.800266661540125 TVTAMDVVYALKR ddPTM_KYSE-520_SHP099_60min_R1 10 TVTAMDVVYALKR 13 1 P62805 P62805 HIST1H4A Histone H4 0 ;;;;;;;;; 273.15 4.4638e-22 33914600000.0 12198684.0 13614224.0 13721360.0 15306821.0 16216144.0 13343445.0 18417646.0 11116970.0 26559883.0 12139207.0 False True 11521998.681046342 12960176.243673168 14605860.820552258 16761576.66567647 17492262.27556187 13260163.610255387 20279481.396583196 11078407.825790308 21737277.76736466 12031663.070140135 0.9576397389020422 1.0771724713466582 1.2139519479065783 1.3931221783690828 1.4538524037440599 1.102105630198714 1.6855094161431665 0.9207711154482384 1.8066727467885686 1.0 23.520332736252957 -4.779937732999901 2.0146239759900277 1.3430347592631142 0.9708689448075796 0.19009601259980624 0.2654114788471058 0.5443807580088749 4.186986300974563 0.06833993344804318 0.2553805187248 1.6598248678786902e-05 4.779937732999901 -0.37216581445553465 TVTAMDVVYALKRQGR ddPTM_KYSE-520_SHP099_60min_R1 6 TVTAMDVVYALKRQGR 16 2 P62805 P62805 HIST1H4A Histone H4 0 ;;;;; 254.58 3.913e-24 5705920000.0 2048050.0 2365270.0 6561870.0 1376600.0 3065250.0 2130230.0 3210420.0 1688770.0 5071540.0 2005580.0 False True 1934440.5838135423 2251638.8788573467 6984858.63956322 1507431.650110119 3306467.7361132265 2116934.444401302 3534960.584279807 1682912.051031881 4150676.179119485 1987812.121517629 0.9731506126125545 1.1327221795681046 3.513842462249657 0.7583370851764626 1.6633703458799958 1.064957005486561 1.7783172494093562 0.8466152473942222 2.088062616275114 1.0 20.922749976041455 TVTCVTVVEPEAPPS(ph)PDVLQAATHR ddPTM_KYSE-520_SHP099_60min_R1 12 TVTCVTVVEPEAPPSPDVLQAATHR 25 0 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR;TVTCVTVVEPEAPPS(1)PDVLQAATHR 211.89 2.7370000000000002e-21 18541230000.0 5240850.0 6401610.0 5016837.0 4376714.0 4135581.0 5975770.0 4113476.0 5597620.0 6861970.0 6222830.0 True False 4950129.603124535 6094067.046587495 5340230.340243006 4792675.582652955 4461027.696462889 5938473.002830668 4529306.297737046 5578203.162714333 5616009.224186842 6167700.567488475 0.8025891576543019 0.9880614306587578 0.8658381323491487 0.7770603534024288 0.723288630446508 0.9628341936918722 0.7343589800082346 0.9044218508464025 0.9105515358171344 1.0 22.556301295620326 -7.935920707693806 1.7604491777204525 0.9965010430940149 0.8415835026750481 0.2615326880837898 0.08389562057857052 0.48766125466134835 3.3801561820313015 0.0803021445936905 0.02314904986557267 1.1589889418903105e-08 7.935920707693806 -0.15491754041896677 TVTDVSTIDGNAAELVSGRPVSDTTEPS(ph)SPEGK ddPTM_KYSE-520_SHP099_60min_R1 1 TVTDVSTIDGNAAELVSGRPVSDTTEPSSPEGK 33 1 C9JA33;B1ALY0;Q8IXS6;Q8IXS6-2 C9JA33 PALM2;PALM2-AKAP2 Paralemmin-2 1 TVTDVSTIDGNAAELVSGRPVS(0.011)DT(0.05)T(0.223)EPS(0.65)S(0.067)PEGK 231.23 9.2741e-24 1009600000.0 1037700.0 1084400.0 709770.0 746390.0 829900.0 1040200.0 804160.0 1025300.0 1096000.0 1029200.0 True False 980136.7123963365 1032303.7962824162 755522.9098721528 817326.6811896628 895208.4085149226 1033707.7259574011 885452.3406452889 1021743.4736068189 896994.0279116322 1020082.088705483 0.9608410178441242 1.0119811020233116 0.7406491283764581 0.8012361850474962 0.8775846752205706 1.0133573929027706 0.8680206725019125 1.0016286776522507 0.8793351415962479 1.0 19.960253823680787 -6.110870710329275 11.285690787856781 0.9472517713371309 0.873492919975891 0.15988590715959583 0.08406951858673363 1.1362718108224206 109.34389286792027 0.02918718548966688 0.029193971935301113 7.746923897645167e-07 6.110870710329275 -0.07375885136123994 TVTDVSTIDGNAAELVSGRPVSDTTEPSS(ph)PEGK ddPTM_KYSE-520_SHP099_60min_R1 3 TVTDVSTIDGNAAELVSGRPVSDTTEPSSPEGK 33 1 C9JA33;B1ALY0;Q8IXS6;Q8IXS6-2 C9JA33 PALM2;PALM2-AKAP2 Paralemmin-2 1 TVTDVSTIDGNAAELVSGRPVSDTT(0.009)EPS(0.348)S(0.642)PEGK;TVTDVSTIDGNAAELVSGRPVSDTT(0.008)EPS(0.357)S(0.634)PEGK;TVTDVSTIDGNAAELVSGRPVS(0.012)DT(0.197)T(0.156)EPS(0.123)S(0.512)PEGK 335.91 6.985699999999998e-82 3359390000.0 2206610.0 2410100.0 1740140.0 1712950.0 1925790.0 2425220.0 1963880.0 2411990.0 2542620.0 2541300.0 True False 2084204.944532019 2294315.178366146 1852312.2087224429 1875748.252982804 2077338.7167537666 2410083.3023903198 2162408.156021771 2403623.3696526987 2080944.302234191 2518786.059101482 0.8274640623013098 0.9108813231976476 0.7353987854701768 0.7447032852214266 0.8247380555595137 0.9568431958250796 0.8585120392452702 0.9542784949787022 0.8261695330235864 1.0 21.26429715682662 -6.133266320675233 5.818611009965817 0.9120926451593421 0.8047876797059405 0.42078092771166764 0.06483421981575749 0.2528708271104388 10.932547832466076 0.02168830828055673 0.02174918632519822 7.35755774544469e-07 6.133266320675233 -0.10730496545340162 TVTPAS(ph)SAKT(ph)SPAK ddPTM_KYSE-520_SHP099_60min_R1 1 TVTPASSAKTSPAK 14 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 2 TVT(0.005)PAS(0.62)S(0.375)AKT(0.563)S(0.437)PAK 132.59 1.5307e-05 2209300000.0 1756900.0 1577200.0 1733800.0 1677600.0 1654500.0 1553000.0 1529000.0 1769600.0 2106500.0 1769100.0 True False 1659441.254706681 1501428.9445745335 1845563.5221780862 1837038.5996111704 1784699.7371827199 1543307.1509438981 1683566.2416019754 1763461.6706277465 1724012.700543662 1753427.150338971 0.946398745100918 0.8562824775949651 1.0525464498603796 1.0476845868709377 1.0178351218285306 0.8801661082101685 0.9601575071291155 1.0057228042162092 0.9832245954503313 1.0 20.74174606149006 -4.755070933202283 24.99998017985785 0.991199202495221 0.9013406172120426 0.3477587527143591 0.050366621600188746 181.33306677282727 711821.9233343885 0.013955442067743896 0.03507199672007718 1.757636516208561e-05 4.755070933202283 -0.08985858528317836 TVTPAS(ph)SAKTS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 2 TVTPASSAKTSPAK 14 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 2 TVTPAS(0.902)S(0.098)AKT(0.344)S(0.656)PAK;T(0.019)VT(0.028)PAS(0.476)S(0.476)AKT(0.17)S(0.83)PAK 255.23 6.319399999999999e-19 1285840000.0 2549410.0 2301040.0 2422530.0 2225560.0 2365560.0 2193550.0 2003070.0 2294550.0 2868800.0 2389540.0 True False 2407989.1451771636 2190494.584468545 2578690.159985048 2437076.5532609867 2551716.113804751 2179859.24079394 2205559.8636793173 2286590.741601999 2347898.2365628546 2368370.5346339867 1.0167282145947234 0.924895219069709 1.0888035137557412 1.0290098266391488 1.077414229103766 0.920404644846175 0.9312562504161409 0.9654700175348085 0.9913559564385073 1.0 21.175463379454797 -6.269289320412477 24.990328355276684 0.9576366808850182 1.0251811987897923 0.3267744116566095 0.04689843733000571 762.7162397285733 2428104.9686769526 0.016969326989759347 0.015238429982560262 5.379113147479663e-07 6.269289320412477 0.06754451790477412 TVTPASS(ph)AKT(ph)SPAK ddPTM_KYSE-520_SHP099_60min_R1 1 TVTPASSAKTSPAK 14 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 2 TVTPAS(0.054)S(0.946)AKT(0.907)S(0.093)PAK 147.35 6.139e-06 637830000.0 886870.0 712070.0 777570.0 808920.0 844410.0 815640.0 759220.0 869160.0 1105700.0 812480.0 True False 837673.5531684866 677861.0883611395 827693.4063559885 885799.5135893326 910860.2629643165 810549.288213704 835969.3668731546 866145.0868234695 904932.7524287328 805282.0592998757 1.0402237868018225 0.8417685213929664 1.0278304313343296 1.0999866486029255 1.1311071101673766 1.0065408496973194 1.038107526696868 1.0755797634142117 1.1237463221464226 1.0 19.619134666707133 -4.9865471946016395 24.35225444826276 1.0693983508891707 0.9394468878898933 0.40344269999302884 0.060974491097727436 149.3632589363122 270371.7610660005 0.015312141148717817 0.031845730401363584 1.0314609849105717e-05 4.9865471946016395 -0.1299514629992774 TVTPASS(ph)AKTS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 3 TVTPASSAKTSPAK 14 1 A0A1C7CYX9;Q16555-2;Q16555 A0A1C7CYX9 DPYSL2 Dihydropyrimidinase-related protein 2 2 TVTPAS(0.147)S(0.853)AKTS(1)PAK;TVTPAS(0.155)S(0.845)AKT(0.062)S(0.938)PAK;T(0.005)VT(0.007)PAS(0.432)S(0.556)AKT(0.203)S(0.797)PAK 283.78 4.0598999999999995e-32 1209120000.0 2283040.0 2121450.0 1928410.0 2040060.0 2007250.0 1974680.0 1795910.0 2061340.0 2420550.0 1987940.0 True False 2156395.220072592 2019532.357638631 2052718.3941650933 2233946.689033598 2165209.155309771 1962355.2896496446 1977458.1091925467 2054189.692660371 1981039.1370999103 1970328.3981939184 1.0944344212108144 1.0249724662598452 1.0418153623764936 1.1337940878694754 1.0989077543086159 0.9959534113442297 1.0036185394298553 1.0425620899253765 1.0054360171207042 1.0 20.9100046756357 -6.264797454828343 24.983010321194627 1.0118056738468533 1.0767974556947637 0.5596595355921874 0.030663249566047802 266.9049225702338 1985678.691045773 0.011579420196836164 0.010626777131142871 5.435037503098834e-07 6.264797454828343 0.06499178184791043 TVVRQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 TVVRQSPR 8 1 Q03164-2;Q03164;Q03164-3;E9PR05 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 TVVRQS(1)PR;TVVRQS(1)PR;TVVRQS(1)PR;TVVRQS(1)PR 108.77 0.0019148 3806730000.0 5157600.0 4648410.0 5373120.0 3578800.0 3933860.0 4113050.0 3848820.0 3932270.0 5621900.0 4432110.0 True False 4871497.646579304 4425093.406194344 5719479.912495971 3918928.075994542 4243432.401398376 4087378.9292915645 4237896.28646339 3918629.8731687204 4601104.676566059 4392844.953529407 1.1089618910099082 1.0073411315459762 1.3019990400300119 0.8921161838061006 0.9659872921280804 0.9304628259204966 0.9647270348247724 0.8920483000476306 1.0474088489896112 1.0 22.066724149400947 -5.289387766798196 24.999359063805763 0.9513115325422674 1.1262248063492415 0.5189881047106144 0.08048568483872284 544.8343234829536 487343.9203567255 0.021562107607865498 0.03198867485696693 5.135848842975252e-06 5.289387766798196 0.17491327380697408 TVVTGIEMFHK ddPTM_KYSE-520_SHP099_60min_R1 1 TVVTGIEMFHK 11 0 P49411 P49411 TUFM Elongation factor Tu, mitochondrial 0 122.7 0.00018854 0.0 335920.0 302100.0 202320.0 211530.0 319410.0 311620.0 212190.0 241300.0 241960.0 211350.0 False True 317285.8479600821 287586.66253865557 215361.8709234458 231633.7476011866 344545.74980570114 309675.06399043015 233640.2359748353 240462.98661984337 198026.1633152356 209477.60342781182 1.5146528448298873 1.372875466554404 1.0280901986625113 1.1057685585992014 1.6447856198833934 1.4783206363020447 1.1153470927279832 1.1479174035075757 0.9453333438745278 1.0 17.67643647897778 -6.906142366103285 5.708965817247936 1.0530208420308618 1.3441137387090225 0.4147036187548917 0.17858358486245732 0.25498885986913555 12.552456709678749 0.08443387443197185 0.05637929436481045 1.2412453481723982e-07 6.906142366103285 0.29109289667816074 TVWDWELMNDIK ddPTM_KYSE-520_SHP099_60min_R1 3 TVWDWELMNDIK 12 0 P14625 P14625 HSP90B1 Endoplasmin 0 ;; 128.85 0.0012585 91588000.0 399653.0 374498.0 291409.0 313234.0 392458.0 419270.0 311786.0 345782.0 384336.0 366919.0 False True 377483.45140149654 356506.5539470421 310193.6904108853 343003.66518276423 423342.2118194351 416653.1804096903 343304.3716181259 344582.56294812536 314550.2707221214 363668.38311866246 1.037988092790366 0.9803067038432002 0.8529575426678521 0.9431770291420811 1.1640885803407923 1.1456953635525122 0.9440038990304749 0.9475186157046005 0.8649370836823224 1.0 18.472263979552178 -6.967356300193533 24.997817046350544 0.9328886882755922 1.0167862232258718 0.16251612755321554 0.09038216583733708 396.7703174505082 303837.1748051386 0.042756658383497036 0.028826305113140514 1.0780619049224214e-07 6.967356300193533 0.08389753495027952 TVWDWELMNDIKPIWQRPSK ddPTM_KYSE-520_SHP099_60min_R1 2 TVWDWELMNDIKPIWQRPSK 20 2 P14625 P14625 HSP90B1 Endoplasmin 0 ; 119.51 1.3055999999999998e-05 96445000.0 322440.0 280063.0 240243.0 198159.0 440360.0 351650.0 218211.0 192582.0 189517.0 99421.0 False True 304553.6104317955 266608.3530968666 255729.44818239077 216991.97178132433 475013.826694338 349455.22191205557 240269.89741413263 191913.97799097653 155105.49013478917 98540.20728836753 3.0906532349840856 2.705579381588526 2.595178711508344 2.202065306665331 4.8205076868192505 3.546321156900063 2.4382929976086625 1.9475702687468528 1.5740325132551154 1.0 16.58842488604413 -7.353027682406516 1.7086548732936018 1.2630539678568145 3.127807287938342 0.5481505432855802 0.6822134609052295 0.33575883965519016 1.7590591009630583 0.607582325615071 0.22146206037917196 4.4358036873117066e-08 7.353027682406516 1.8647533200815274 TVWIAR ddPTM_KYSE-520_SHP099_60min_R1 2 TVWIAR 6 0 Q16629;C9JAB2;Q16629-4;Q16629-3;Q16629-2;A0A0B4J1Z1 Q16629;A0A0B4J1Z1 SRSF7 Serine/arginine-rich splicing factor 7 0 ; 148.4 0.051682000000000006 1014180000.0 1038660.0 980350.0 736110.0 716510.0 1037760.0 1013960.0 799640.0 817260.0 829930.0 823670.0 False True 981043.4592826229 933252.5144646494 783560.8284176431 784606.8949734136 1119425.807953302 1007631.4995306341 880475.41493434 814425.1158099178 679235.6328327567 816372.9246055637 1.2017099412705545 1.1431693608843738 0.9598074664176619 0.9610888251254803 1.371218684762433 1.2342784396205673 1.0785210880918765 0.9976140698240488 0.8320163645320968 1.0 19.63886880993701 -7.31008825204926 2.7443118892628515 0.9184697941523231 1.1383377808150652 0.3587717463380933 0.12161204247840032 0.34464150897350865 5.049159822313203 0.08697876278726364 0.03703482901593527 4.896793025777309e-08 7.31008825204926 0.2198679866627421 TVWS(ph)SGDDKEQLVK ddPTM_KYSE-520_SHP099_60min_R1 2 TVWSSGDDKEQLVK 14 1 K7ES27;K7EM91;O43291-2;O43291 K7ES27 SPINT2 Kunitz-type protease inhibitor 2 1 TVWS(0.858)S(0.142)GDDKEQLVK;TVWS(0.879)S(0.121)GDDKEQLVK 170.09 1.604e-08 851710000.0 689320.0 584680.0 494410.0 688940.0 589620.0 721980.0 613520.0 710880.0 849770.0 666590.0 True False 651082.0454746473 556591.095177428 526280.45968397 754416.6504626367 636019.7395211091 717473.8550151169 675540.5889781844 708414.1232006396 695473.1889584549 660684.531199173 0.9854658535638837 0.8424460826518663 0.7965684601828752 1.1418712181641906 0.9626678232752082 1.085955279916829 1.0224858568310158 1.0722426358535067 1.052655474914993 1.0 19.333602041305028 -5.25775827980717 24.99999670210302 1.0482077695558096 0.8715887259206591 0.6089726855302198 0.06367355238110896 203.29782235036956 1380681.0103580027 0.016767434323511132 0.027677143192234004 5.52384800794519e-06 5.25775827980717 -0.17661904363515057 TVYHAEEVQCDGR ddPTM_KYSE-520_SHP099_60min_R1 1 TVYHAEEVQCDGR 13 0 F8VQR7;F8VW96;Q16527 F8VQR7 CSRP2 Cysteine and glycine-rich protein 2 0 142.85 1.7888e-05 38364000.0 53895.0 50460.0 31559.0 31184.0 43183.0 50217.0 33709.0 39718.0 43279.0 34344.0 False True 50905.3369129811 48035.825857995864 33593.34363618535 34147.71798418851 46581.25642233994 49903.57707594967 37116.63468813671 39580.227528250885 35420.624574806134 34039.73887922766 1.4954679027824584 1.4111690465201878 0.9868860556003055 1.003172148451078 1.3684375367158172 1.4660387746511983 1.090391287072613 1.162765309942029 1.0405668709879894 1.0 15.054932349620087 -1.0000000000000002 0.12223200373868441 0.9548013298343543 2.2726387019530763 0.2687919704711683 0.16972478203738206 161.33669367493238 1.353831635486102 1.2476511607028948 36.29714503104637 0.09999999999999995 1.0000000000000002 1.317837372118722 TWDHFWLNEGHTVYLER ddPTM_KYSE-520_SHP099_60min_R1 2 TWDHFWLNEGHTVYLER 17 0 P09960-4;P09960;P09960-3;P09960-2 P09960-4 LTA4H Leukotriene A-4 hydrolase 0 ; 112.12 0.00028615 142000000.0 101192.0 91813.0 83692.0 85769.0 100387.0 93011.0 71932.0 76581.0 85355.0 72700.0 False True 95578.6780387492 87402.16566587731 89086.92023193455 93920.45997260996 108286.88577610254 92430.48384832127 79203.58854866802 76315.35838513971 69856.68362445016 72055.93455974416 1.3264511607923355 1.212976643768447 1.2363578486109204 1.3034382323462494 1.5028170328748982 1.2827601836415548 1.09919590985247 1.0591127413920904 0.9694785592785489 1.0 16.136829635866583 -6.863668387585571 2.7804782516943596 1.0166817418827452 1.3134912634618516 0.7734241485893423 0.0752429711138465 0.14485675790562907 2.2575693763093034 0.0400586330933281 0.02530038212599147 1.368773575370481e-07 6.863668387585571 0.29680952157910645 TWHPEHFVCTHCQEEIGSR ddPTM_KYSE-520_SHP099_60min_R1 2 TWHPEHFVCTHCQEEIGSR 19 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;P49023-4;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 0 ; 150.98 7.060800000000001e-07 1369580000.0 176614.0 140258.0 123453.0 160807.0 185337.0 161859.0 142648.0 173222.0 143074.0 134562.0 False True 166816.86934871966 133519.79514844992 131410.97791178408 176090.0489316124 199921.96747672046 160848.77794245238 157068.25195031954 172621.13331231877 117095.36820203367 133369.88536765194 1.250783629969139 1.0011240152181637 0.9853122205926184 1.320313415927416 1.4990038187826944 1.2060352117650188 1.17768903765149 1.2943036790986624 0.8779745733397357 1.0 17.02507342030406 -7.7640024253060425 24.999973012098366 0.9389871925972018 1.2131057671463457 0.3736825811726141 0.1438122334306912 81.83282053200922 798118.5415957758 0.13168661456328812 0.040074630256648036 1.7218589592833613e-08 7.7640024253060425 0.2741185745491439 TWS(ph)EKDLR ddPTM_KYSE-520_SHP099_60min_R1 1 TWSEKDLR 8 1 F5H0D8;E9PKU1;G5EA30;Q92879-4;E9PKA1;F5H4Y5;E9PQK4;E9PSH0;Q92879-5;Q92879-2;Q92879-3;Q92879-6;Q92879 F5H0D8 CELF1 CUGBP Elav-like family member 1 1 TWS(1)EKDLR 77.192 0.022642 817690000.0 1738500.0 1647600.0 1503500.0 1434800.0 1652400.0 1551300.0 1256800.0 1437000.0 1909000.0 1585600.0 True False 1642061.9393861685 1568446.8229019807 1600418.0156850542 1571162.9606116489 1782434.4791300856 1541617.7612744838 1383849.6091859809 1432015.3823983208 1562373.7219738185 1571552.8175781316 1.0448658937958548 0.9980236141977478 1.0183673102068602 0.999751928817077 1.1341868114092002 0.9809519247658632 0.880561947207467 0.9112104705492194 0.9941592191483206 1.0 20.583759329133475 -6.518651368313656 24.945274648732354 0.937894221580427 1.0358434150689235 0.4431326776072927 0.04879863277119145 157.62524431834098 930140.7860614008 0.0183059040764098 0.014545929659617679 3.029344270892463e-07 6.518651368313656 0.09794919348849651 TWS(ph)PTACGGK ddPTM_KYSE-520_SHP099_60min_R1 2 TWSPTACGGK 10 0 Q15464;Q15464-2 Q15464 SHB SH2 domain-containing adapter protein B 1 T(0.001)WS(0.906)PT(0.092)ACGGK;TWS(0.995)PT(0.005)ACGGK 102.53 0.0017599 297350000.0 1207470.0 1067400.0 948360.0 834580.0 1121940.0 1020230.0 987130.0 1068040.0 1202410.0 1035880.0 True False 1140489.2320682313 1016120.5017999349 1009492.8030296509 913898.232274373 1210230.2950346211 1013862.3661348972 1086918.733860406 1064335.2185224087 984082.6542894391 1026702.9091024462 1.110826921748238 0.989692824274003 0.9832375014035555 0.8901291933353065 1.1787541306302682 0.9874934191247454 1.0586497069640148 1.0366535529278484 0.9584882302025752 1.0 19.969587347308423 -4.2530636555539365 23.821249989520975 1.012006662014167 1.1108270181061068 0.15470545719341755 0.07097656915781674 1124.8108293300868 3198912.4719373183 0.017439018090587406 0.19019717032215921 5.583883444580265e-05 4.2530636555539365 0.09882035609193984 TWS(ph)TDDFFAGLR ddPTM_KYSE-520_SHP099_60min_R1 2 TWSTDDFFAGLR 12 0 Q9H6Y2;G3V1J0;Q9H6Y2-2 Q9H6Y2 WDR55 WD repeat-containing protein 55 1 T(0.001)WS(0.967)T(0.032)DDFFAGLR;T(0.014)WS(0.975)T(0.011)DDFFAGLR 111.39 0.00017769999999999998 63802000.0 164848.0 152121.0 132900.0 150877.0 155887.0 136877.0 131061.0 156739.0 167458.0 143681.0 True False 155703.55282365895 144812.87882172398 141466.9466475184 165216.3047171759 168154.4200242992 136022.69987105482 144309.92491209746 156195.3089921578 137051.8484726514 142408.09812212648 1.093361647805524 1.0168865445947828 0.9933911660430929 1.1601608819709783 1.180792540885513 0.9551612700733095 1.0133547657404989 1.0968147953089555 0.9623880262421478 1.0 17.11967166279479 -6.283622289353477 24.995789843752796 1.012082891663341 1.0835676281505169 0.2932124207267104 0.06405471408052502 1360.8102268023608 1533360.466592589 0.024428241211622466 0.021558177229296153 5.204484394405605e-07 6.283622289353477 0.07148473648717579 TWTDFEHMETIEK ddPTM_KYSE-520_SHP099_60min_R1 1 TWTDFEHMETIEK 13 0 C9J6P4;Q7Z2W4-2;Q7Z2W4;H7C5K1;Q7Z2W4-5;Q7Z2W4-4 C9J6P4 ZC3HAV1 Zinc finger CCCH-type antiviral protein 1 0 122.45 0.00014782 58146000.0 240700.0 214560.0 155310.0 137100.0 197360.0 203280.0 160910.0 176530.0 169330.0 174520.0 False True 227347.89117644564 204252.2155388741 165321.5311047862 150129.94277938205 212891.10917520788 202011.25411711278 177176.3531302644 175917.65863241153 138583.94046193126 172973.88857450528 1.314348038597281 1.180826870588021 0.9557600425544982 0.8679341374389948 1.23077021005693 1.1678713809460333 1.0242953696097836 1.0170185805624545 0.801184164870288 1.0 17.400194745436124 -4.552411027375597 3.8771528014337515 1.018514921899312 1.2943200252905718 0.4085525173992435 0.11948717279885053 0.22191006660044554 7.090978631676096 0.03308270595428713 0.11551565083214421 2.8027797600431093e-05 4.552411027375597 0.27580510339125985 TWTTPEVT(ph)SPPPSPR ddPTM_KYSE-520_SHP099_60min_R1 3 TWTTPEVTSPPPSPR 15 0 Q5T1S5;Q7Z6M1-2;Q7Z6M1 Q5T1S5 RABEPK Rab9 effector protein with kelch motifs 1 TWTT(0.008)PEVT(0.526)S(0.466)PPPSPR;TWTTPEVT(0.5)S(0.5)PPPSPR;TWTTPEVT(0.646)S(0.354)PPPSPR 226.62 5.9782e-14 2391640000.0 2657610.0 2749740.0 2096560.0 1917190.0 1969590.0 2604970.0 2101330.0 2539350.0 2859890.0 2825500.0 True False 2510187.0754858125 2617638.3629561127 2231707.612214608 2099399.1611758107 2124585.5275658616 2588711.415965441 2313752.9434044994 2530541.5875387434 2340606.0679600365 2800468.268205734 0.8963454804985506 0.9347145235226104 0.7969051595947801 0.7496600425759868 0.7586536693476224 0.9243851984882636 0.8262021639998535 0.9036137335560909 0.8357909620092456 1.0 21.417236650685116 -9.123287953109283 0.575655433947678 1.0128067448593763 0.8389780952558628 0.34686511497371186 0.06293190554538312 6.6939136092601625 2.396797017162138 0.2684930926253107 0.029567261746256752 7.528562270272054e-10 9.123287953109283 -0.17382864960351352 TWTTPEVTS(ph)PPPSPR ddPTM_KYSE-520_SHP099_60min_R1 2 TWTTPEVTSPPPSPR 15 0 Q5T1S5;Q7Z6M1-2;Q7Z6M1 Q5T1S5 RABEPK Rab9 effector protein with kelch motifs 1 TWTT(0.006)PEVT(0.07)S(0.924)PPPSPR;TWTTPEVT(0.457)S(0.543)PPPSPR 231.71 1.27e-15 1442320000.0 2849400.0 3143200.0 2383360.0 2195290.0 2255840.0 3115500.0 2237540.0 2739100.0 3380500.0 3203400.0 True False 2691338.101861923 2992195.953960614 2536995.199110828 2403929.701561996 2433361.7740261527 3096055.008863952 2463732.379485995 2729598.701410743 2766686.415470139 3175020.368207485 0.8476601059984274 0.9424178767237049 0.799048479976566 0.7571383559089347 0.7664082405241233 0.9751291802300739 0.7759737241865128 0.8597106112272871 0.8713917060734077 1.0 21.598334416332655 -8.360728106850678 1.47944119975939 0.9999459064497693 0.8388267034489764 0.3272318259046091 0.06864567148534557 1.7948651875546708 5.739211075934764 0.06760567777487196 0.019679212263559735 4.3578461435838576e-09 8.360728106850678 -0.16111920300079297 TYDATTHFETTCDDIK ddPTM_KYSE-520_SHP099_60min_R1 1 TYDATTHFETTCDDIK 16 0 P50395-2;P50395 P50395-2 GDI2 Rab GDP dissociation inhibitor beta 0 169.09 7.0053e-08 442170000.0 464070.0 352890.0 241130.0 338310.0 384730.0 489010.0 328440.0 382170.0 335960.0 349490.0 False True 438327.11199938995 335936.6347013111 256673.62562164108 370462.88068338967 415006.0621857407 485957.9072009506 361641.92046550295 380844.34146914864 274958.1328624016 346393.7904991055 1.2654011821858042 0.9698113647397458 0.7409879526183477 1.0694847622689885 1.1980759285198916 1.402905942686653 1.0440196400299988 1.0994548745241786 0.7937732730896387 1.0 18.40205354279117 -7.742081085556448 24.251187072906408 0.8968866861525037 1.093190410590489 0.1779283071002873 0.1732437371722878 284.8099415720718 356800.5397052432 0.12787997303361717 0.0481514212756567 1.8110019354124845e-08 7.742081085556448 0.19630372443798538 TYEEGLKHEANNPQLK ddPTM_KYSE-520_SHP099_60min_R1 3 TYEEGLKHEANNPQLK 16 1 P31948;P31948-2;F5H783;F5GXD8 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ;; 221.59 4.4672000000000004e-18 6151490000.0 5119140.0 4294430.0 3100810.0 3098280.0 4497670.0 4065370.0 3362920.0 3655630.0 3781840.0 3461060.0 False True 4835171.0994474115 4088119.1367291585 3300693.174071418 3392739.599668154 4851611.040758295 4039996.5178575707 3702876.7725363798 3642949.472760458 3095153.1884282185 3430397.7010639347 1.40950744514194 1.1917332895428516 0.9621896531261408 0.989022234540298 1.4142998752749782 1.1777049980544732 1.0794307527048352 1.06196126228472 0.9022724063359358 1.0 21.70994441338759 -7.2423645726918044 1.807615323949889 0.9617777823397357 1.178781083571217 0.2959443779118377 0.14233910806756253 0.5510390954928301 3.326914697018501 0.11310239158585698 0.0456829429004562 5.723153935988064e-08 7.2423645726918044 0.21700330123148126 TYFTDKK ddPTM_KYSE-520_SHP099_60min_R1 1 TYFTDKK 7 1 P27824;P27824-2;P27824-3;D6RGY2;D6RFL1;H0Y9H1 P27824 CANX Calnexin 0 81.548 0.032096 420120000.0 276660.0 300460.0 179170.0 237990.0 318800.0 346780.0 279050.0 355520.0 381150.0 266720.0 False True 261313.11829196336 286025.4506003455 190719.584882136 260608.49804569717 343887.7462761267 344615.6173884907 307259.0972655541 354286.7840989916 311942.7680095968 264357.06830502005 0.9884854600916344 1.081966343605854 0.7214468903932625 0.9858200490595632 1.3008456648465427 1.3035990283825771 1.162288185580243 1.3401827549782364 1.180005399551759 1.0 18.012128376046043 -5.678513810127766 5.698197583469767 1.2328267014849008 0.9326162561057006 0.53071203972042 0.12415073616644132 0.149878789231556 7.891577000753291 0.036148418822354304 0.046626232599308995 2.09645811397233e-06 5.678513810127766 -0.30021044537920016 TYGGDTGS(ph)PEISFTK ddPTM_KYSE-520_SHP099_60min_R1 7 TYGGDTGSPEISFTK 15 0 O94915;H0Y9X0;A0A2C9F2R7;A0A286YEZ9 O94915 FRYL Protein furry homolog-like 1 TYGGDT(0.043)GS(0.957)PEISFTK;TYGGDT(0.096)GS(0.901)PEIS(0.003)FTK;TYGGDT(0.002)GS(0.998)PEISFTK;TYGGDT(0.002)GS(0.998)PEISFTK;TYGGDTGS(1)PEISFTK;TYGGDT(0.114)GS(0.886)PEISFTK;TYGGDT(0.26)GS(0.74)PEISFTK 308.0 1.0831999999999999e-42 7499380000.0 10877150.0 10640610.0 9011250.0 8571310.0 9831800.0 9807620.0 8945600.0 9347980.0 11509420.0 9420280.0 True False 10273772.80643904 10129419.123718765 9592129.59350978 9385924.725341689 10605506.724710217 9746407.005628083 9849908.548642684 9315554.039214928 9419599.456867428 9336823.648066936 1.1003498827533373 1.0848891984605413 1.027343982821792 1.0052588630915096 1.1358795158250574 1.0438675263665225 1.0549528319175199 0.9977219652363883 1.0088655212865276 1.0 23.15450040335233 -7.16622184319598 2.7495210735508118 1.001259424209266 1.0653348164964893 0.4016490856313346 0.03499138350816808 0.31407436938060695 4.57260162783786 0.021040390715918435 0.0104108094264363 6.819902357842493e-08 7.16622184319598 0.06407539228722325 TYHYHCALHDK ddPTM_KYSE-520_SHP099_60min_R1 3 TYHYHCALHDK 11 0 Q5JRC6;A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0;Q8IWS0-4;Q8IWS0-2 Q5JRC6 PHF6 PHD finger protein 6 0 ;; 156.69 1.7142e-05 1247920000.0 1092560.0 1323240.0 1160840.0 1259660.0 1276570.0 1186030.0 1253720.0 1180280.0 1240520.0 706470.0 False True 1031953.5188356375 1259669.5641762672 1235669.6038096694 1379377.7076694102 1377028.7963102714 1178627.54683451 1380458.2527280783 1176185.8841594225 1015272.8389643594 700211.2254253437 1.473774600241201 1.7989851039749902 1.7647097889055707 1.9699451502387817 1.9665905748280377 1.6832457179168359 1.9714883203843498 1.6797586805966267 1.449952245977821 1.0 19.41743066493168 -8.015900707827061 1.81189525110032 1.0038078033400109 1.81129862601721 0.7428118251286895 0.1461215272643399 0.18331921625333214 1.3694671940756658 0.14062694511209223 0.04003409385385989 9.640494077708544e-09 8.015900707827061 0.8074908226771991 TYHYHCGVQDK ddPTM_KYSE-520_SHP099_60min_R1 3 TYHYHCGVQDK 11 0 Q5JRC6;A0A0D9SGE8;Q8IWS0-5;Q8IWS0-3;Q8IWS0 Q5JRC6 PHF6 PHD finger protein 6 0 ;; 107.18 0.0010716 715124000.0 1084788.0 1121418.0 778733.0 814007.0 1038309.0 921598.0 862631.0 969351.0 847618.0 744077.0 False True 1024612.6471687335 1067543.3959972637 828931.3751968538 891369.980539872 1120018.0111299204 915845.9650325803 949834.1599472564 965988.5476292234 693711.93791095 737485.0566631458 1.389333435181367 1.447545799541367 1.1239975206378685 1.2086617518367084 1.518699261782467 1.2418501998894098 1.287936821723431 1.3098415200437736 0.9406454159895072 1.0 19.49225429139677 -7.758025858392315 24.959023277867146 0.970322602651905 1.3137430431133088 0.6137548986187091 0.10967262183986855 53.728816606214714 392879.0251423467 0.08354221190159312 0.02867303155059228 1.745718207758676e-08 7.758025858392315 0.34342044046140385 TYS(ph)APAINAIQGGSFES(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 2 TYSAPAINAIQGGSFESPKK 20 1 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 2 T(0.11)Y(0.016)S(0.875)APAINAIQGGS(0.104)FES(0.896)PKK;T(0.157)Y(0.002)S(0.842)APAINAIQGGS(0.028)FES(0.972)PKK 126.28 2.9666999999999997e-07 156500000.0 712710.0 611560.0 512320.0 560590.0 603400.0 589610.0 584570.0 534490.0 641720.0 550500.0 True False 673174.5555478393 582179.7396297253 545344.9669409825 613868.3050524709 650884.147123635 585930.0252852758 643664.0404534126 532635.9789409039 525199.8244447564 545622.9982825193 1.2337723257025812 1.0670000008472467 0.9994904332434448 1.1250777679547421 1.1929191936052013 1.073873401835393 1.1796864180569757 0.9761978153734443 0.9625690744304221 1.0 19.05754493039872 -7.278176249479567 23.827584954442305 0.9770375307283026 1.118223821383712 0.5095663806785956 0.06494710201258001 400.716468402035 570478.3229358417 0.03624357774089724 0.01749894901719253 5.270159394425414e-08 7.278176249479567 0.14118629065540933 TYS(ph)APAINAIQGGSFESPK ddPTM_KYSE-520_SHP099_60min_R1 2 TYSAPAINAIQGGSFESPK 19 0 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.003)YS(0.997)APAINAIQGGSFESPK;TYS(1)APAINAIQGGSFESPK 378.07 6.578899999999999e-79 1369610000.0 747410.0 721280.0 489020.0 559640.0 563790.0 831160.0 660480.0 872620.0 765300.0 701460.0 True False 705949.6773751035 686628.6261366485 520543.0116596641 612828.0173380984 608157.0654737056 825972.4221368533 727247.764063619 869593.0848910398 626340.8116430405 695245.6101276221 1.0153960946916536 0.9876058419277298 0.748718156687262 0.8814554287161988 0.8747370089284991 1.1880296834743544 1.0460299978451102 1.2507710544643549 0.9008914296173216 1.0 19.407163204670976 -6.2470739269730045 24.69130548496085 1.0908729722507133 0.8967509327489389 0.37560723468460677 0.11239758399663255 676.2433757220188 1162325.8477080155 0.03660854792021518 0.0364473668796662 5.661429102082652e-07 6.2470739269730045 -0.19412203950177442 TYS(ph)APAINAIQVPK ddPTM_KYSE-520_SHP099_60min_R1 1 TYSAPAINAIQVPK 14 0 Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-6 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.03)YS(0.97)APAINAIQVPK 184.0 1.2762000000000002e-10 423600000.0 268570.0 235970.0 229020.0 174940.0 161770.0 274030.0 216920.0 267650.0 260390.0 281800.0 True False 253671.88671897844 224633.64700180877 243782.99564495633 191566.24500237126 174500.37865460804 272319.6771237329 238848.3905351868 266721.5846199798 213109.73989772814 279303.4712370828 0.908230340265455 0.8042637136118215 0.8728247972185945 0.6858713361273013 0.6247698171516309 0.9749956773454428 0.8551572577214542 0.9549526306945786 0.7630042654100527 1.0 18.091473978256627 -6.2906359293676255 24.99885770693659 0.903402454344853 0.7806021527952743 0.30213525506820005 0.09887611461611721 1017.3606065138941 871087.6911432144 0.035662068810667844 0.031455809645663184 5.121109601138835e-07 6.2906359293676255 -0.12280030154957866 TYS(ph)APAINAIQVPKPFSGPVR ddPTM_KYSE-520_SHP099_60min_R1 2 TYSAPAINAIQVPKPFSGPVR 21 1 Q9H4L5-6;Q9H4L5-2;Q9H4L5-8;Q9H4L5-4 Q9H4L5-6 OSBPL3 Oxysterol-binding protein-related protein 3 1 T(0.18)Y(0.03)S(0.79)APAINAIQVPKPFSGPVR;T(0.001)YS(0.999)APAINAIQVPKPFSGPVR 227.49 1.0280999999999999e-19 3902840000.0 1263180.0 1324620.0 1318970.0 652050.0 1077150.0 1161390.0 946350.0 961220.0 1378680.0 927710.0 True False 1193108.8873130993 1260983.266904843 1403992.9166266148 714020.6359540186 1161915.5768548609 1154141.3342142531 1042016.293485958 957885.7521704349 1128346.4656945332 919491.2111474574 1.2975750859262563 1.3713924087770548 1.5269236938921198 0.7765388372369252 1.2636505523580543 1.2551956127715127 1.1332531304846278 1.0417562893016281 1.227142197788318 1.0 19.81047625930287 -1.0000000011618855 0.2170628104597408 1.0459143774653257 2.8673138478843434 0.21349621271432462 0.177655835376317 80.85053663184603 1.0251572458052505 0.28833356829220474 51.386530320080794 0.09999999973246598 1.0000000011618855 1.8213994704190177 TYS(ph)DEANQMR ddPTM_KYSE-520_SHP099_60min_R1 4 TYSDEANQMR 10 0 A0A1B0GTL5;Q9BXF6 A0A1B0GTL5 RAB11FIP5 Rab11 family-interacting protein 5 1 TYS(1)DEANQMR;T(0.001)YS(0.999)DEANQMR;T(0.001)YS(0.999)DEANQMR;T(0.038)YS(0.962)DEANQMR 207.47 5.3993e-08 2201250000.0 4741310.0 4509760.0 4085330.0 4091590.0 4237770.0 4297890.0 4204390.0 4247580.0 4887160.0 4276720.0 True False 4478300.082732843 4293104.3603122365 4348676.908559114 4480453.483418608 4571258.389387017 4271065.27428865 4629410.772092181 4232846.136372621 3999774.939277927 4238831.588037817 1.0564939865435603 1.0128037104440715 1.0259140563242204 1.0570020040575945 1.0784241587439625 1.0076043800234475 1.0921431238638017 0.9985879477537898 0.943603173706047 1.0 22.015235217498443 -7.512001284413162 21.706024873797976 0.9715661531050825 1.0451298631911632 0.5486333023004377 0.028287186079276133 64.45545374270043 128629.78632884752 0.016327003736428508 0.0070552439135566376 3.076087717288268e-08 7.512001284413162 0.07356371008608065 TYS(ph)FEQPWPNAR ddPTM_KYSE-520_SHP099_60min_R1 4 TYSFEQPWPNAR 12 0 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 TYS(1)FEQPWPNAR;TYS(1)FEQPWPNAR;TYS(1)FEQPWPNAR;TYS(1)FEQPWPNAR 293.95 9.0097e-30 4875680000.0 3705760.0 3850920.0 3529330.0 3684650.0 4089120.0 3743340.0 3614970.0 4008570.0 4802990.0 4023030.0 True False 3500194.1055505862 3665916.0228512376 3756836.2589276647 4034838.0281695793 4410910.480089818 3719976.426538527 3980406.4463073225 3994665.2062772755 3930888.089524897 3987389.0840699794 0.8778160424660372 0.9193775539730851 0.9421795013525526 1.0118997527201856 1.1062152167973398 0.9329353991061988 0.9982488195620154 1.0018247835999665 0.9858300774381888 1.0 21.92701295777215 -4.967471114360338 2.317435093352156 1.005803692681085 0.8942231795120668 0.5316212268490779 0.04100429385408681 0.24488033401679282 2.60838210547231 0.01205226296732314 0.03094233335151435 1.0777769360255532e-05 4.967471114360338 -0.11158051316901818 TYS(ph)IDGPNASRPQSARPSINEIPER ddPTM_KYSE-520_SHP099_60min_R1 2 TYSIDGPNASRPQSARPSINEIPER 25 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 T(0.125)YS(0.519)IDGPNAS(0.308)RPQS(0.042)ARPS(0.006)INEIPER;T(0.063)YS(0.937)IDGPNASRPQSARPSINEIPER 134.21 1.3433000000000001e-06 2612010000.0 382960.0 515630.0 408160.0 628140.0 541970.0 557790.0 511980.0 722590.0 785970.0 514230.0 True False 361716.44538816664 490858.360823591 434470.64667909034 687838.2367428232 584619.9556125234 554308.6257083055 563735.9348432833 720083.5039437731 643257.6606913363 509674.3222648856 0.7097011357777939 0.9630823829662825 0.8524475879977513 1.3495642348357173 1.147046123521772 1.0875741654888056 1.1060708970743498 1.4128306498625893 1.262095484490634 1.0 18.959216145564593 -5.245343404221946 24.132274014158327 1.2020444322023265 0.8538774850703579 0.60772009117342 0.12987485298771007 360.5852415145079 540614.2448979703 0.03573275861877755 0.061614401317903175 5.684033066955613e-06 5.245343404221946 -0.3481669471319686 TYS(ph)LTTPAR ddPTM_KYSE-520_SHP099_60min_R1 3 TYSLTTPAR 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 T(0.012)Y(0.001)S(0.904)LT(0.083)T(0.001)PAR;T(0.002)YS(0.991)LT(0.007)TPAR;T(0.068)YS(0.875)LT(0.057)TPAR 147.78 0.00030957 8717600000.0 5003700.0 4564200.0 4291500.0 3870600.0 4074500.0 4479700.0 4023200.0 4281300.0 5224100.0 4813400.0 True False 4726134.786371344 4344928.980996128 4568136.956642775 4238460.660261673 4395139.969266243 4451740.53063966 4429904.3186481865 4266449.169562929 4275535.128844121 4770757.02076853 0.9906467182874894 0.9107420399071583 0.9575287395179236 0.8884251790251292 0.9212667822177668 0.9331308451174318 0.9285537493029912 0.894291859968932 0.89619637098084 1.0 22.185786779675123 TYS(ph)SPGSFK ddPTM_KYSE-520_SHP099_60min_R1 2 TYSSPGSFK 9 0 Q8N3Z6 Q8N3Z6 ZCCHC7 Zinc finger CCHC domain-containing protein 7 1 T(0.01)YS(0.559)S(0.431)PGSFK;T(0.001)YS(0.568)S(0.43)PGSFK 70.1 0.023315 1185650000.0 3136200.0 2788300.0 2557300.0 2233670.0 2304980.0 2613700.0 2559300.0 2564400.0 2956000.0 2746900.0 True False 2962228.7341403007 2654345.882676373 2722147.649824673 2445957.3252226245 2486368.8124578004 2597386.928797212 2818019.020360984 2555504.6949354573 2419264.9146959702 2722564.603055861 1.0880288132797422 0.9749432133573918 0.9998468527686285 0.8984019414919423 0.9132451107558845 0.9540221473098758 1.0350604783438317 0.9386387717180734 0.8885977992884132 1.0 21.37653485202302 -3.8840861790876113 1.3030797249873571 0.949306679475279 1.2827906160160527 0.4539469675801303 0.04444977686369928 3.110510841040553 2.404208366492566 0.013490783289813011 1.7470163827326994 0.00013059117242408168 3.8840861790876113 0.3334839365407737 TYS(ph)VPR ddPTM_KYSE-520_SHP099_60min_R1 1 TYSVPR 6 0 H0Y6E9;B1AMU0;H0Y536;B1AMU5;Q969W1;Q969W1-2;Q969W1-3 REV__A0A2R8Y617 ZDHHC16 Palmitoyltransferase;Probable palmitoyltransferase ZDHHC16 1 T(0.099)Y(0.001)S(0.901)VPR 74.415 0.038824000000000004 745030000.0 1681400.0 1486300.0 1451700.0 1409600.0 1515500.0 1484400.0 1338600.0 1420100.0 1618500.0 1422700.0 True False 1588129.3902121976 1414895.917018216 1545278.9048021236 1543567.960188306 1634761.2279845357 1475135.3089897789 1473918.7514770473 1415174.0045538333 1324621.1990647602 1410095.9848438497 1.1262562316905418 1.0034039754924187 1.095867885173252 1.0946545318751735 1.1593262058437568 1.046124040380933 1.0452612923653315 1.003601187269919 0.9393837109687574 1.0 20.42736193914333 -7.095891395978435 1.6248521906418991 0.9715774734489991 1.0890990625236392 0.5792818451982997 0.041503742765770645 0.29730483034233834 1.4864798160436221 0.029711901896302708 0.013319658566274047 8.01878564090429e-08 7.095891395978435 0.11752158907464005 TYSAPAINAIQGGSFES(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 3 TYSAPAINAIQGGSFESPKK 20 1 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 TYSAPAINAIQGGS(0.017)FES(0.983)PKK;TYSAPAINAIQGGSFES(1)PKK;TYSAPAINAIQGGSFES(1)PKK 276.79 4.6067999999999996e-36 3673450000.0 2117170.0 2182850.0 1625520.0 1396930.0 1546220.0 2161550.0 1567800.0 1891670.0 2122790.0 1885750.0 True False 1999726.3596262415 2077982.6094753512 1730303.6201239573 1529693.8071976826 1667898.717211646 2148058.964663738 1726288.5242534843 1885108.2382890962 1737344.847181144 1869043.7220913009 1.069919518730529 1.1117891919351492 0.9257694722025522 0.8184366096508889 0.8923807921119198 1.1492823518650719 0.9236212635635481 1.0085950456952502 0.9295367607758276 1.0 20.833868887420895 -4.759361929629207 24.99958992619316 0.9548279573915439 1.0908543942377122 0.2979625276732173 0.08281341692605576 67.49177923526297 812127.3700012796 0.02259729041603595 0.05405134631108857 1.740355901917557e-05 4.759361929629207 0.13602643684616833 TYSAPAINAIQGGSFES(ph)PKKEK ddPTM_KYSE-520_SHP099_60min_R1 2 TYSAPAINAIQGGSFESPKKEK 22 2 Q9H4L5-5;Q9H4L5;Q9H4L5-7;Q9H4L5-3 Q9H4L5-5 OSBPL3 Oxysterol-binding protein-related protein 3 1 TYSAPAINAIQGGS(0.012)FES(0.988)PKKEK;TYSAPAINAIQGGS(0.015)FES(0.985)PKKEK 172.18 6.421200000000001e-10 2919000000.0 4231400.0 4245600.0 3649500.0 4057200.0 3586700.0 4091100.0 3640100.0 3481400.0 4696900.0 3496800.0 True False 3996675.806913226 4041635.003224477 3884752.609406463 4442795.0681583425 3868952.8844685825 4065565.9273835123 4008076.8319524853 3469323.8359648725 3844061.359213636 3465821.0724692345 1.1531685344811475 1.166140697605316 1.1208751196837636 1.281888180393877 1.1163163947503312 1.1730455330421856 1.156458094098008 1.0010106590681966 1.1091343952372368 1.0 21.724765744732657 -7.197120071656855 6.662790044490657 1.0415845463659341 1.1682889555316538 0.5758551940324083 0.05114052102489653 0.16766789359080417 14.4030439753538 0.02338150650614945 0.01333500052811324 6.351553028803887e-08 7.197120071656855 0.12670440916571968 TYSIDGPNAS(ph)RPQSARPSINEIPER ddPTM_KYSE-520_SHP099_60min_R1 3 TYSIDGPNASRPQSARPSINEIPER 25 2 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 T(0.001)YS(0.03)IDGPNAS(0.878)RPQS(0.09)ARPS(0.001)INEIPER;TYS(0.006)IDGPNAS(0.767)RPQS(0.22)ARPS(0.007)INEIPER;TYS(0.029)IDGPNAS(0.964)RPQS(0.006)ARPSINEIPER 179.54 5.1843e-11 3557500000.0 583390.0 809890.0 596930.0 1016180.0 884720.0 751320.0 805740.0 1130440.0 1234310.0 820470.0 True False 551028.1937408672 770981.6687303254 635409.0629217697 1112757.4416743428 954342.4306317898 746630.7331919967 887192.0624646015 1126518.7674866796 1010190.418422998 813201.2741160003 0.6776037019123816 0.9480822193354651 0.7813675201290091 1.3683665742948798 1.1735623897899308 0.9181376824619836 1.0909870541324886 1.3852889848349963 1.2422390994420625 1.0 19.633252950022058 -5.244083039300194 24.69963473298304 1.1709883954696498 0.8169242028951262 0.5523908268570642 0.15080247083612533 577.2568206310949 821486.9400965597 0.04285683149110176 0.07399694147062846 5.700552644116041e-06 5.244083039300194 -0.3540641925745236 TYSS(ph)PGSFK ddPTM_KYSE-520_SHP099_60min_R1 1 TYSSPGSFK 9 0 Q8N3Z6 Q8N3Z6 ZCCHC7 Zinc finger CCHC domain-containing protein 7 1 TYS(0.001)S(0.999)PGSFK 163.9 0.00012231 1005000000.0 1990000.0 1708700.0 1511100.0 1374800.0 1504500.0 1678200.0 1559500.0 1560500.0 1898400.0 1666600.0 True False 1879610.733033348 1626611.4871890126 1608507.9238454856 1505460.5786513092 1622895.5905659741 1667725.7313033186 1717149.4792532916 1555086.9897234368 1553698.4147695622 1651835.2205951815 1.1378923936227099 0.9847298731182882 0.9737702064894316 0.9113866564177442 0.9824803166391016 1.0096199127552272 1.039540420160418 0.9414298534953839 0.9405892279072128 1.0 20.655638346706823 -4.260355747400583 4.4978218959281655 0.9745399750759849 1.1489275056753678 0.656301725216162 0.03522119864130819 0.12974288963364772 6.704344364839804 0.009522667418103982 0.07201069353617327 5.490909079991745e-05 4.260355747400583 0.17438753059938294 TYSSS(ph)LKR ddPTM_KYSE-520_SHP099_60min_R1 5 TYSSSLKR 8 1 E9PDI4;O00515 E9PDI4 LAD1 Ladinin-1 1 TYS(0.005)S(0.282)S(0.713)LKR;TYS(0.004)S(0.097)S(0.899)LKR;TYS(0.144)S(0.144)S(0.711)LKR;TYSS(0.022)S(0.978)LKR;TYSS(0.139)S(0.861)LKR 133.99 0.00049104 16520120000.0 11447390.0 8993330.0 8405680.0 8435860.0 8055760.0 7691500.0 7728910.0 7797980.0 9445940.0 7836680.0 True False 10812380.456893802 8561276.927536454 8947523.58236353 9237601.598066203 8689702.4809955 7643494.495482948 8510223.649692569 7770930.627442211 7730795.408769701 7767253.112044775 1.3920468794980958 1.1022271070657368 1.1519546811843293 1.189300961976035 1.1187613375853906 0.9840666172742699 1.0956542199578458 1.000473464086259 0.9953062295319642 1.0 22.88897304925811 -1.000000000000002 0.30647046508266573 0.9966087150136926 3.9213062667292773 0.7316136398820936 0.061420023321422934 30.156181205146734 0.4306573382807552 0.06200930345190118 48.709345866731496 0.09999999999999953 1.000000000000002 2.9246975517155844 TYSYLTPDLWK ddPTM_KYSE-520_SHP099_60min_R1 2 TYSYLTPDLWK 11 0 P15880;H0YEN5;E9PQD7 P15880 RPS2 40S ribosomal protein S2 0 ; 190.96 5.9042999999999995e-06 2750000000.0 2927300.0 3382000.0 2171840.0 2286820.0 3599400.0 3654600.0 2863100.0 2496000.0 2682870.0 2591710.0 False True 2764916.833572121 3219523.6435145065 2311840.2814668645 2504158.685242497 3882652.302215464 3631790.2857949645 3152530.089163255 2487341.958570777 2195728.4376489776 2568749.4657198694 1.0763668744150092 1.2533427983068264 0.8999866714596052 0.9748551653871502 1.511495127893831 1.4138359284396727 1.2272625770765022 0.968308506440398 0.8547849710340063 1.0 21.292634758049054 -7.323118518744208 5.065217336783323 0.926241015839501 1.197102357663612 0.3003259024334014 0.17704247855464741 0.30497711854113213 16.06268456890907 0.11173254786758462 0.05240223998165617 4.752055248988097e-08 7.323118518744208 0.2708613418241109 TYT(ph)HEVVTLWYR ddPTM_KYSE-520_SHP099_60min_R1 3 TYTHEVVTLWYR 12 0 G3V5T9;P24941;Q00526;K7EJ83 G3V5T9 CDK2;CDK3 Cyclin-dependent kinase 2;Cyclin-dependent kinase 3 1 T(0.144)YT(0.856)HEVVTLWYR;T(0.227)YT(0.773)HEVVTLWYR;T(0.271)YT(0.729)HEVVTLWYR 194.55 8.42e-08 6073760000.0 2540960.0 2690340.0 2212450.0 2353470.0 2167300.0 2280590.0 1961670.0 2047280.0 2403680.0 2052030.0 True False 2400007.8835218213 2561092.0281173326 2355068.0670451606 2577143.0812034435 2337854.179749838 2266355.9918680917 2159974.7476542518 2040178.4635187464 1967232.3038418174 2033850.6106551837 1.180031547522895 1.2592331092067297 1.1579356196109705 1.2671250620384769 1.1494719265525224 1.1143178264887454 1.0620124882025817 1.0031112672830598 0.9672452310585851 1.0 20.955782284319987 -6.646170165164676 1.078388513438631 0.9812078714338119 1.2162198971806442 0.8809426237536345 0.03477600821107982 0.15202745572210558 0.35779701718794715 0.021836023003750704 0.013758746078050268 2.2585506520284295e-07 6.646170165164676 0.23501202574683222 TYVENSKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 TYVENSKSPK 10 1 O95171-3;O95171-2;O95171 O95171-3 SCEL Sciellin 1 TYVENS(0.007)KS(0.993)PK;TYVENS(0.019)KS(0.981)PK 77.527 0.0092409 1444010000.0 1932630.0 1701770.0 1421350.0 1260830.0 1406910.0 1406280.0 1170830.0 1250130.0 2061020.0 1371980.0 True False 1825423.1612976096 1620014.4147911526 1512972.4952404099 1380658.9041176368 1517625.8127771157 1397502.8848869205 1289188.9225996344 1245793.5908125367 1686790.7220861614 1359825.324584287 1.3423953270289777 1.1913400828054208 1.112622678727462 1.0153207762472867 1.1160446752534705 1.0277076471672213 0.948054797401095 0.9161423664420936 1.240446615892987 1.0 20.37498991231392 -3.9582835514629315 0.8149458855629138 1.0252487392201044 1.6870626026111202 0.5594437235627556 0.08544519258978711 2.752816808663277 1.01160756981174 0.031214414434586023 1.8411581639759464 0.00011008203477464079 3.9582835514629315 0.6618138633910158 VAAAAGSGPS(ph)PPGS(ph)PGHDR ddPTM_KYSE-520_SHP099_60min_R1 6 VAAAAGSGPSPPGSPGHDR 19 0 Q9BTU6 Q9BTU6 PI4K2A Phosphatidylinositol 4-kinase type 2-alpha 2 VAAAAGS(0.001)GPS(0.999)PPGS(1)PGHDR;VAAAAGS(0.001)GPS(0.999)PPGS(1)PGHDR;VAAAAGSGPS(1)PPGS(1)PGHDR;VAAAAGS(0.006)GPS(0.994)PPGS(1)PGHDR;VAAAAGS(0.009)GPS(0.991)PPGS(1)PGHDR;VAAAAGSGPS(1)PPGS(1)PGHDR 306.67 3.3648e-53 3811600000.0 2908310.0 2973880.0 2616140.0 3149820.0 3402360.0 3718080.0 3582680.0 3773810.0 4352910.0 3403190.0 True False 2746980.24672775 2831010.3409151165 2784780.570372001 3449177.9457720844 3670106.3752197027 3694874.0835682503 3944852.25798729 3760719.5339238727 3562531.2719314094 3373040.384241759 0.8143929315406807 0.8393052019599558 0.8255995342901904 1.0225723836234 1.088070689092779 1.0954135327967138 1.1695241706612627 1.114934630339228 1.0561780667005702 1.0 21.68561816067059 -5.375770211140093 2.580239128102248 1.0974648739076596 0.8222393703636783 0.885077428959101 0.041945267763984904 0.08490440831916014 1.0985556033132704 0.012683937464682708 0.020931384898037864 4.209492972818362e-06 5.375770211140093 -0.27522550354398123 VAAETQS(ph)PSLFGSTK ddPTM_KYSE-520_SHP099_60min_R1 6 VAAETQSPSLFGSTK 15 0 Q9UKX7-2;Q9UKX7 Q9UKX7-2 NUP50 Nuclear pore complex protein Nup50 1 VAAETQS(0.991)PS(0.009)LFGSTK;VAAETQS(0.981)PS(0.019)LFGSTK;VAAETQS(0.992)PS(0.008)LFGSTK;VAAETQS(0.981)PS(0.019)LFGSTK;VAAETQS(0.998)PS(0.002)LFGSTK;VAAETQS(0.914)PS(0.086)LFGSTK 362.02 1.6888999999999997e-67 7562640000.0 5784160.0 6236630.0 4648580.0 4034020.0 4608640.0 8228620.0 6899760.0 10208500.0 9951160.0 9623030.0 True False 5463301.114362899 5937012.933427513 4948234.904790981 4417412.047927661 4971313.748425368 8177262.130328396 7597255.075968381 10173089.096181814 8144280.192329481 9537777.440804055 0.5728065210444175 0.6224734190198309 0.518803771161789 0.4631489962251901 0.5212235008920775 0.8573550998731457 0.7965435472908158 1.0666100314586708 0.8538970680409272 1.0 23.185221687892632 -6.406022055271637 2.283387250952393 0.9376644819597703 0.5359953059224529 0.8439372089456336 0.08074870507310149 0.11805280182353994 1.2102688147844616 0.033498601753427094 0.0280879402583445 3.9262499577066323e-07 6.406022055271637 -0.40166917603731733 VAAQS(ph)PPS(ph)PASAEALLPALPLR ddPTM_KYSE-520_SHP099_60min_R1 11 VAAQSPPSPASAEALLPALPLR 22 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 2 VAAQS(0.937)PPS(0.894)PAS(0.169)AEALLPALPLR;VAAQS(0.996)PPS(0.963)PAS(0.041)AEALLPALPLR;VAAQS(1)PPS(0.989)PAS(0.012)AEALLPALPLR;VAAQS(1)PPS(1)PASAEALLPALPLR;VAAQS(0.991)PPS(0.977)PAS(0.033)AEALLPALPLR;VAAQS(1)PPS(0.957)PAS(0.043)AEALLPALPLR;VAAQS(0.997)PPS(0.84)PAS(0.162)AEALLPALPLR;VAAQS(0.995)PPS(0.967)PAS(0.038)AEALLPALPLR;VAAQS(0.998)PPS(0.96)PAS(0.042)AEALLPALPLR;VAAQS(1)PPS(0.999)PAS(0.001)AEALLPALPLR;VAAQS(0.996)PPS(0.855)PAS(0.149)AEALLPALPLR 141.83 1.0875e-06 1386608500.0 1128336.0 1093226.0 1082449.0 995135.0 1039933.0 965729.0 968170.0 1046680.0 1322025.0 1084525.0 True False 1065744.9527979481 1040705.7819943202 1152225.3945196357 1089712.3312017517 1121769.810690625 959701.527092016 1066042.072028638 1043049.3113769478 1081978.585538208 1074916.9522476813 0.9914672483017835 0.9681731968392306 1.0719203861380178 1.01376420654929 1.0435874216561318 0.8928145798475439 0.9917436596376253 0.970353392600147 1.006569468716407 1.0 20.0357937712704 VAAQS(ph)PPSPASAEALLPALPLR ddPTM_KYSE-520_SHP099_60min_R1 3 VAAQSPPSPASAEALLPALPLR 22 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 VAAQS(0.999)PPS(0.001)PASAEALLPALPLR;VAAQS(0.998)PPS(0.002)PASAEALLPALPLR;VAAQS(0.992)PPS(0.008)PASAEALLPALPLR 114.88 0.00016289 305004000.0 110997.0 150317.0 108142.0 108362.0 112663.0 125715.0 80940.0 103330.0 147256.0 125460.0 True False 104839.77514296625 143095.5456895832 115113.00635331764 118660.69189977681 121528.93713521722 124930.36605338861 89122.20509827603 102971.57234740323 120518.02242167457 124348.52200640307 0.8431123543033968 1.1507619341242736 0.925728786284972 0.9542589649249439 0.977325143671264 1.0046791392257608 0.7167130228832704 0.8280884298898294 0.9691954554592032 1.0 16.924029834370362 VAAQSPPS(ph)PASAEALLPALPLR ddPTM_KYSE-520_SHP099_60min_R1 6 VAAQSPPSPASAEALLPALPLR 22 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 VAAQS(0.001)PPS(0.684)PAS(0.315)AEALLPALPLR;VAAQS(0.006)PPS(0.961)PAS(0.033)AEALLPALPLR;VAAQS(0.001)PPS(0.966)PAS(0.033)AEALLPALPLR;VAAQS(0.002)PPS(0.915)PAS(0.083)AEALLPALPLR;VAAQS(0.016)PPS(0.667)PAS(0.317)AEALLPALPLR;VAAQS(0.009)PPS(0.952)PAS(0.039)AEALLPALPLR 212.0 1.9205e-17 695591000.0 324751.0 464204.0 299071.0 303086.0 311044.0 434899.0 325564.0 431378.0 495802.0 439771.0 True False 306736.4146549314 441902.9430555906 318349.5951905188 331891.2023138714 335521.3932017297 432184.63402340724 358475.18631844776 429881.6504023818 405776.8549513168 435874.9710766611 0.7037256897253296 1.0138295896275937 0.7303690652485938 0.76143670625102 0.7697652204551995 0.9915334963048273 0.8224266363195231 0.9862499086389954 0.9309478219155404 1.0 18.733554837705935 -6.255908424004714 24.90839952757789 0.9376343840332184 0.802389673746963 0.3974710421397467 0.09211160846973009 509.0762485841845 2292602.5998268346 0.030333049932029208 0.029501661891938445 5.547426745105879e-07 6.255908424004714 -0.1352447102862554 VAAQSPPSPAS(ph)AEALLPALPLR ddPTM_KYSE-520_SHP099_60min_R1 1 VAAQSPPSPASAEALLPALPLR 22 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 VAAQSPPS(0.417)PAS(0.582)AEALLPALPLR 130.47 3.1764e-05 46615000.0 31143.0 55126.0 38774.0 30959.0 36119.0 49816.0 29687.0 47529.0 56896.0 45212.0 True False 29415.435707968645 52477.664214187076 41273.43408059351 33901.33405183724 38961.359811001916 49505.07986569306 32688.051677199404 47364.132992351966 46565.12063144177 44811.45685440375 0.6564266768550264 1.1710769499124185 0.9210464684220027 0.7565327358578315 0.8694508624790018 1.1047415848705677 0.7294574640455381 1.0569648102770255 1.0391342727984905 1.0 15.451580009910828 VAAS(ph)PKS(ph)PTAALNESLVECPK ddPTM_KYSE-520_SHP099_60min_R1 4 VAASPKSPTAALNESLVECPK 21 1 Q53EZ4 Q53EZ4 CEP55 Centrosomal protein of 55 kDa 2 VAAS(1)PKS(0.633)PT(0.367)AALNESLVECPK;VAAS(0.999)PKS(0.965)PT(0.036)AALNESLVECPK;VAAS(0.832)PKS(0.893)PT(0.275)AALNESLVECPK;VAAS(0.999)PKS(0.97)PT(0.032)AALNESLVECPK 219.43 2.7658e-19 3347237000.0 3333430.0 2893930.0 2978050.0 2983270.0 3110800.0 3339600.0 3159420.0 3505210.0 4719490.0 3448370.0 True False 3148517.9928720384 2754901.25892251 3170019.8680484733 3266799.0838471646 3355602.2619691794 3318756.317638283 3478805.0065677706 3493051.2446321626 3862549.584661189 3417820.1245912677 0.9212064643830737 0.8060404463947513 0.9274975722801011 0.95581363698531 0.9817960394772007 0.9710155001311453 1.0178432099272035 1.0220114333986174 1.1301207915741633 1.0 21.704645041180605 -5.73878266662531 0.6190007870396209 1.0535071100903555 0.8509095818069328 0.664529240468227 0.04591149988286558 0.5546619475914953 0.44297042265837105 0.03129140831244141 0.06237567204565424 1.8248086602880966e-06 5.73878266662531 -0.2025975282834227 VAASGAQDPEKS(ph)PDR ddPTM_KYSE-520_SHP099_60min_R1 2 VAASGAQDPEKSPDR 15 1 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 VAASGAQDPEKS(1)PDR;VAASGAQDPEKS(1)PDR 208.85 8.7933e-14 0.0 728330.0 643790.0 580160.0 625000.0 684910.0 691830.0 693960.0 709520.0 720180.0 712060.0 True False 687928.0830101413 612861.3620515087 617558.0418888213 684399.8120868977 738808.5203951752 687512.0323486923 764112.2491969314 707058.8407232133 589413.4662604003 705751.7023742975 0.9747451981990354 0.8683809900701818 0.8750358515767314 0.9697458890774651 1.0468391615771773 0.9741556839831301 1.0826927467922454 1.0018521221337735 0.8351569883253402 1.0 19.42880117810327 -5.416917402615241 5.123408462123436 0.9951711188595228 0.9031605775502409 0.2420252540398926 0.06606136067185116 0.3026040090008715 11.90808431180381 0.019134009586797066 0.028579454631674047 3.828975587243915e-06 5.416917402615241 -0.09201054130928188 VAASGAQDPEKS(ph)PDRLK ddPTM_KYSE-520_SHP099_60min_R1 3 VAASGAQDPEKSPDRLK 17 2 Q1MSJ5-1;Q1MSJ5;Q1MSJ5-2 Q1MSJ5-1 CSPP1 Centrosome and spindle pole-associated protein 1 1 VAASGAQDPEKS(1)PDRLK;VAASGAQDPEKS(1)PDRLK;VAASGAQDPEKS(1)PDRLK 187.19 1.9745e-12 6653600000.0 6763700.0 6307800.0 6035400.0 5665540.0 5692120.0 5817460.0 5448210.0 5745550.0 7223200.0 5770250.0 True False 6388504.077898326 6004763.819799175 6424451.5409814315 6203991.218193281 6140057.460267456 5781151.074262784 5998968.236205571 5725620.028071445 5911648.962054105 5719130.074186567 1.1170412274294992 1.0499435651764282 1.123326704873937 1.084778827849212 1.0735998972957015 1.0108444814633872 1.0489301971434537 1.0011347799054564 1.0336622677523066 1.0 22.44736428746371 -6.116479551636568 2.9644003028498758 1.0205396417756976 1.092358246301738 0.7032346044225124 0.02320181762154849 0.15107292276007456 2.5482407545956023 0.007726741100822552 0.007837736441861863 7.64751695234011e-07 6.116479551636568 0.0718186045260405 VAASMPLS(ph)PGGQMEEVAGAVK ddPTM_KYSE-520_SHP099_60min_R1 2 VAASMPLSPGGQMEEVAGAVK 21 0 A0A669KBI7;Q9UMN6 A0A669KBI7 KMT2B Histone-lysine N-methyltransferase 2B 1 VAASMPLS(1)PGGQMEEVAGAVK;VAASMPLS(1)PGGQMEEVAGAVK 213.48 6.1653e-19 592020000.0 441330.0 558920.0 339940.0 343360.0 373800.0 515180.0 405330.0 544340.0 518560.0 554030.0 True False 416848.5451304563 532068.644243976 361853.0763232311 375992.83116505155 403215.93336893397 511964.5705236824 446304.71203958767 542451.8115899106 424402.5758338101 549121.725228818 0.7591186543507384 0.9689448073143782 0.6589669643328127 0.6847167283508516 0.7342924434485171 0.9323334827270724 0.8127609809165961 0.987853487974587 0.7728752229880584 1.0 19.06676646504853 -6.259085885165832 24.983930581497543 0.8948802512392127 0.7628192914260411 0.3214496335464403 0.10145257793734011 284.2274921771706 3017279.293493302 0.03462416359352569 0.0330705495512788 5.506987806004872e-07 6.259085885165832 -0.13206095981317156 VAAYDKLEK ddPTM_KYSE-520_SHP099_60min_R1 2 VAAYDKLEK 9 1 P35579 P35579 MYH9 Myosin-9 0 ; 112.13 0.00099788 2797800000.0 6239000.0 5747500.0 4238000.0 3467300.0 6400000.0 5683000.0 4169100.0 4702600.0 5460000.0 5129000.0 False True 5892910.232861838 5471381.472826614 4511188.261039745 3796831.149518247 6903643.588981211 5647530.28899819 4590553.314494961 4686287.778195089 4468601.635399186 5083561.050301615 1.1592091005796425 1.0762891246288837 0.8874071180422018 0.7468841451786983 1.3580329852774382 1.1109397985223595 0.903019216071497 0.9218513817035884 0.8790297964719156 1.0 22.277408032811667 -6.774148057612783 24.815924127188616 0.919462676097289 1.0493136455377972 0.14508383200264563 0.15426750105260367 476.79622351411535 931019.3342987304 0.06893538813074038 0.046830949487114054 1.6821005095905156e-07 6.774148057612783 0.1298509694405081 VACIGAWHPAR ddPTM_KYSE-520_SHP099_60min_R1 3 VACIGAWHPAR 11 0 H7C422;P39023;B5MCW2;G5E9G0;Q92901 H7C422 RPL3;RPL3L 60S ribosomal protein L3;60S ribosomal protein L3-like 0 ;; 111.65 0.00050091 2647100000.0 3688090.0 2500990.0 1967460.0 1800504.0 2746970.0 2557130.0 1976452.0 2641880.0 2371010.0 2533110.0 False True 3483504.295674859 2380838.6863374733 2094285.6196473031 1971623.3588187313 2963140.910878708 2541170.003150791 2176251.05647267 2632715.9348994247 1940494.352298139 2510668.616129761 1.3874807186002671 0.9482887032728267 0.8341545380352428 0.785298125826746 1.1802198393854306 1.0121487108354619 0.8668013940554999 1.048611480617383 0.7728994339720725 1.0 21.259640188767445 -4.262118938796724 6.984353884727564 0.9393306435995334 1.3940816596709336 0.5527657452454453 0.12112246483813581 0.08213505437525281 30.76857836779845 0.03044102306234241 0.17783622905878707 5.468661739492323e-05 4.262118938796724 0.4547510160714001 VADAKGDS(ph)ES(ph)EEDEDLEVPVPSR ddPTM_KYSE-520_SHP099_60min_R1 9 VADAKGDSESEEDEDLEVPVPSR 23 1 P13861-2;P13861 P13861-2 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit 2 VADAKGDS(1)ES(1)EEDEDLEVPVPSR;VADAKGDS(1)ES(1)EEDEDLEVPVPSR;VADAKGDS(1)ES(1)EEDEDLEVPVPSR;VADAKGDS(1)ES(1)EEDEDLEVPVPSR;VADAKGDS(1)ES(1)EEDEDLEVPVPSR;VADAKGDS(1)ES(1)EEDEDLEVPVPSR;VADAKGDS(1)ES(1)EEDEDLEVPVPSR;VADAKGDS(1)ES(1)EEDEDLEVPVPSR;VADAKGDS(1)ES(1)EEDEDLEVPVPSR 244.26 1.3435e-28 39309200000.0 24341200.0 22181380.0 20930140.0 20685020.0 22272400.0 21176960.0 19830650.0 20659260.0 27659910.0 20395230.0 True False 22990945.1130208 21115753.20986982 22279330.313808046 22650918.081621937 24025111.167378906 21044786.737445533 21835325.63049332 20587597.848967534 22637567.593588687 20214544.12944884 1.137346702739997 1.0445822114339984 1.1021435937974577 1.1205257925467513 1.1885062068938166 1.041071547430406 1.0801789785940958 1.0184547184012538 1.1198653528184173 1.0 24.268890333089544 VADIGLAAWGR ddPTM_KYSE-520_SHP099_60min_R1 2 VADIGLAAWGR 11 0 P23526 P23526 AHCY Adenosylhomocysteinase 0 ; 145.72 0.00055717 563540000.0 508940.0 776500.0 510670.0 417290.0 727210.0 799170.0 483130.0 584970.0 549800.0 567080.0 False True 480708.08365326264 739195.7744497372 543588.6053008891 456949.1161371865 784437.2897410978 794182.0835929398 531969.4952944162 582940.8756030251 449970.1793301238 562056.1123815645 0.8552670686497634 1.315163661004575 0.9671429476988976 0.8129955463005022 1.3956565411543196 1.4129943009209576 0.946470438761596 1.037157790408091 0.8005787490211501 1.0 19.100354642273658 VADMALHYANK ddPTM_KYSE-520_SHP099_60min_R1 1 VADMALHYANK 11 0 P50990-2;P50990;H7C4C8;P50990-3 P50990-2 CCT8 T-complex protein 1 subunit theta 0 113.69 0.00047387 349230000.0 861490.0 749490.0 447310.0 460810.0 682760.0 716560.0 515920.0 549550.0 506720.0 554810.0 False True 813701.4323622606 713483.3753925742 476144.3183213053 504605.24385242176 736489.3276270021 712087.6832455648 568074.2284939776 547643.7393159342 414712.42137169937 549894.8150356491 1.4797401432299544 1.2974906398168526 0.8658825384458978 0.9176395740696496 1.339327645013813 1.2949525323300255 1.0330598015497745 0.9959063521637881 0.7541668152386816 1.0 19.06879615791225 -4.564904266736074 5.502531489464804 1.0428167856780364 1.440232383015565 0.436699349055505 0.16973098208141357 0.16740581859806855 12.166856033116623 0.047644317730340176 0.13729358796781885 2.7233015501355236e-05 4.564904266736074 0.3974155973375286 VADNS(ph)FDAK ddPTM_KYSE-520_SHP099_60min_R1 9 VADNSFDAK 9 0 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VADNS(1)FDAK;VADNS(1)FDAK;VADNS(1)FDAK;VADNS(1)FDAK;VADNS(1)FDAK;VADNS(1)FDAK;VADNS(1)FDAK;VADNS(1)FDAK;VADNS(1)FDAK 177.83 3.8878e-05 20448150000.0 20727480.0 18237380.0 18276370.0 16997740.0 17403600.0 16799620.0 17574450.0 18341950.0 21078960.0 17333910.0 True False 19577685.365193028 17361228.88993454 19454494.053425923 18613200.09904314 18773164.307061464 16694767.34007738 19351046.91610325 18278326.056493316 17251552.221339595 17180345.042977933 1.13953970750983 1.0105285340023213 1.1323692280195208 1.0834008311521572 1.0927117156319603 0.9717364405845259 1.1263479789081734 1.0639091363280948 1.0041446884904541 1.0 24.03425567547222 -7.784069110758847 0.21785374158195359 0.9757989580118829 1.1106729708378713 0.24601587068749686 0.05099915762521045 4.598098067442254 0.9392516610172865 0.24548685686951438 0.18575797198571653 1.6441100695661466e-08 7.784069110758847 0.13487401282598843 VADNS(ph)FDAKR ddPTM_KYSE-520_SHP099_60min_R1 11 VADNSFDAKR 10 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VADNS(1)FDAKR;VADNS(1)FDAKR;VADNS(1)FDAKR;VADNS(1)FDAKR;VADNS(1)FDAKR;VADNS(1)FDAKR;VADNS(1)FDAKR;VADNS(1)FDAKR;VADNS(1)FDAKR;VADNS(1)FDAKR;VADNS(1)FDAKR 161.23 7.8199e-05 16382570000.0 21125120.0 21469450.0 21354920.0 17746520.0 19708730.0 18518710.0 18615150.0 18159210.0 24511630.0 17958520.0 True False 19953267.48171734 20438025.39569855 22731492.312280085 19433143.92511418 21259694.92366588 18403127.861723304 20496951.028356463 18096219.938901473 20060935.879908413 17799421.484317143 1.1210065169420211 1.1482409927595822 1.2770916365067557 1.091785142693345 1.1944037025246885 1.033917190956913 1.1515515291559382 1.0166746124218609 1.1270554999545275 1.0 24.0853270157813 -7.047495320099866 0.4378818685865 1.011508749073997 1.182024324231323 0.3613106833310028 0.06452782677094164 1.0969436256303557 0.5100334007791635 0.06725599681453859 0.05937425184462176 8.964058454492253e-08 7.047495320099866 0.17051557515732618 VADPDHDHTGFLT(ph)EYVATR ddPTM_KYSE-520_SHP099_60min_R1 5 VADPDHDHTGFLTEYVATR 19 0 P28482;P28482-2 P28482 MAPK1 Mitogen-activated protein kinase 1 1 VADPDHDHT(0.015)GFLT(0.726)EY(0.01)VAT(0.249)R;VADPDHDHT(0.036)GFLT(0.786)EY(0.042)VAT(0.136)R;VADPDHDHTGFLT(0.513)EY(0.487)VATR;VADPDHDHTGFLT(0.843)EY(0.139)VAT(0.018)R;VADPDHDHTGFLT(0.661)EY(0.294)VAT(0.045)R 262.98 5.354499999999999e-35 4521110000.0 1029475.0 1112303.0 1192580.0 1469450.0 2093430.0 3142980.0 3475930.0 3804540.0 4331920.0 4145050.0 True False 972367.9695424663 1058866.2942791576 1269455.6149954677 1609106.0861937464 2258171.0310126473 3123363.495990768 3827310.9262076905 3791342.9387263134 3545352.5268165665 4108328.0818001 0.23668216125436964 0.25773654712970395 0.30899567651842563 0.391669324882326 0.5496569373357373 0.7602517213333748 0.9315981708380798 0.9228432742560091 0.8629672353876712 1.0 21.970119965947735 -6.076947358010806 1.067903586090188 0.9432879954329194 0.24871039670293607 0.9853645370774522 0.03514244730972851 0.05444455378987488 0.13180709753793712 0.0180285789052491 0.01952639875601125 8.376308074315993e-07 6.076947358010806 -0.6945775987299834 down VADPDHDHTGFLTEY(ph)VATR ddPTM_KYSE-520_SHP099_60min_R1 8 VADPDHDHTGFLTEYVATR 19 0 P28482;P28482-2 P28482 MAPK1 Mitogen-activated protein kinase 1 1 VADPDHDHTGFLTEY(1)VATR;VADPDHDHTGFLT(0.092)EY(0.908)VATR;VADPDHDHTGFLT(0.002)EY(0.998)VATR;VADPDHDHTGFLT(0.086)EY(0.914)VATR;VADPDHDHTGFLT(0.025)EY(0.975)VATR;VADPDHDHTGFLT(0.2)EY(0.798)VAT(0.003)R;VADPDHDHTGFLT(0.266)EY(0.734)VATR;VADPDHDHTGFLT(0.036)EY(0.963)VAT(0.002)R 284.15 1.1785e-43 37965480000.0 2929989.0 3578090.0 3752130.0 7608900.0 10746190.0 22198170.0 26752380.0 28899270.0 31595900.0 34028100.0 True False 2767456.6693817363 3406193.185577416 3993998.303420264 8332047.568300795 11591854.015542809 22059622.987036943 29456771.648468245 28799025.177510303 25858881.02782219 33726637.507461175 0.08205551676384892 0.10099415291025916 0.11842266524602969 0.24704649452402533 0.3437002580817136 0.6540712213649168 0.873397819214906 0.8538955349800061 0.7667198078107121 1.0 25.00738515531813 -6.200193799746489 1.1882699426109018 0.8857131347179695 0.09802665415890922 0.9706359692332202 0.058796054972886716 0.07111562861257742 0.20750145046905935 0.029151063934589605 0.027762623931335897 6.306758486298913e-07 6.200193799746489 -0.7876864805590603 down VAEAVAHFEAQRDS(ph)PPTK ddPTM_KYSE-520_SHP099_60min_R1 2 VAEAVAHFEAQRDSPPTK 18 1 Q6PJ61 Q6PJ61 FBXO46 F-box only protein 46 1 VAEAVAHFEAQRDS(1)PPTK;VAEAVAHFEAQRDS(0.998)PPT(0.002)K 194.75 8.166e-13 1349750000.0 1658130.0 1594320.0 1499520.0 1458950.0 1611620.0 1457990.0 1412420.0 1505930.0 1894000.0 1581770.0 True False 1566150.223499793 1517726.474076891 1596181.4585168299 1597608.1693506863 1738445.325136547 1448890.1435960683 1555201.19749082 1500706.2803167037 1550097.3438545899 1567756.748398439 0.9989752715781405 0.9680879866263329 1.018130816625365 1.0190408499167631 1.1088744008995508 0.9241804540635526 0.991991390934566 0.9572315870110388 0.9887358771940294 1.0 20.580270298991937 -6.311036057409289 24.99996054831842 0.9709775871308083 1.0191442122964567 0.29276196200370896 0.03878692194951498 535.0242578803142 269685.6719467007 0.013990620289062144 0.012338586559030891 4.886117905411514e-07 6.311036057409289 0.0481666251656484 VAEEHAPSIVFIDEIDAIGTK ddPTM_KYSE-520_SHP099_60min_R1 2 VAEEHAPSIVFIDEIDAIGTK 21 0 P62191;P62191-2 P62191 PSMC1 26S protease regulatory subunit 4 0 ; 188.04 6.6805e-13 141221000.0 260306.0 116195.0 91577.0 186347.0 191877.0 136541.0 122473.0 163165.0 130654.0 115851.0 False True 245866.30727285374 110612.81778774926 97480.19994838057 204057.3628527315 206976.6282692107 135688.79697168767 134853.76606129442 162599.01869799718 106930.52711931233 114824.65027071403 2.1412327988214375 0.9633194399196093 0.8489483723099381 1.7771215707745658 1.802545252968212 1.1817044219319084 1.1744321950326793 1.41606369638095 0.9312506231650584 1.0 16.80907286388746 -7.487573957621017 0.9642786398831905 0.9764127109025074 1.4299126257517742 0.16963123457549467 0.38318721168244096 1.154509893369841 1.9968778322543679 0.3673348401638333 0.1382330497995723 3.2540636412054586e-08 7.487573957621017 0.4534999148492669 VAEFHTELER ddPTM_KYSE-520_SHP099_60min_R1 1 VAEFHTELER 10 0 K7EJC1;K7EJR3;R4GMR5;P48556;K7ERW6 K7EJC1 PSMD8 26S proteasome non-ATPase regulatory subunit 8 0 134.59 3.6581e-05 0.0 212500.0 182130.0 149770.0 111050.0 153810.0 185560.0 135660.0 121830.0 153510.0 155990.0 False True 200712.20139175223 173380.20141729643 159424.41384047273 121604.15861160013 165913.97194081248 184401.85121001286 149373.83671401176 121407.40016533567 125636.4536721849 154608.04995838355 1.2982002000916428 1.1214176846804926 1.0311520899680555 0.7865318697463217 1.0731263474668504 1.192705368573299 0.9661452735107862 0.7852592423099274 0.8126126272597252 1.0 17.238255912281016 -4.511965294006201 1.8446664734624139 0.9515319217691334 1.323162756052837 0.44315038352223024 0.12365948415715151 0.5424133963301105 2.7603741386931597 0.038253922703914804 0.2945693482755531 3.076342646238191e-05 4.511965294006201 0.3716308342837036 VAEIEHAEK ddPTM_KYSE-520_SHP099_60min_R1 2 VAEIEHAEK 9 0 P78371-2;P78371;F8VQ14;F5GWF6 P78371-2 CCT2 T-complex protein 1 subunit beta 0 ; 130.66 0.00096451 257210000.0 1560050.0 1539280.0 993310.0 889580.0 1395360.0 1531860.0 1044110.0 1339160.0 1267310.0 1256710.0 False True 1473510.9166174252 1465330.6782936153 1057340.3519521938 974125.4157380207 1505166.8934876283 1522299.0935253846 1149658.8283316146 1334514.7665222946 1037198.4502853007 1245576.5271055857 1.1829950906681768 1.1764276593255047 0.8488762664861655 0.7820678975073889 1.2084098092192432 1.2221642431419564 0.9229933314520142 1.0714032718835667 0.8327055204672936 1.0 20.248382231516374 -4.676609654640977 11.856068977875626 0.995493097302253 1.1806427172510343 0.2275011960675214 0.14188533217551716 0.8845193415190721 118.89793991246476 0.03846565981506991 0.10183017777595774 2.1056701730118826e-05 4.676609654640977 0.18514961994878132 VAEKLDEIYVAGLVAHSDLDER ddPTM_KYSE-520_SHP099_60min_R1 1 VAEKLDEIYVAGLVAHSDLDER 22 1 O60506-2;O60506;O60506-4;O60506-3;F6UXX1 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 103.9 0.00093399 158210000.0 273750.0 242880.0 200460.0 209740.0 209940.0 174330.0 160340.0 204080.0 221570.0 123040.0 False True 258564.54179290458 231211.68022968742 213381.97234734046 229673.62653936946 226461.08360479947 173241.94180556972 176548.73196760027 203372.09411263006 181338.4733251645 121949.96132367161 2.1202511176419274 1.8959553387312729 1.749750225676546 1.8833431683490636 1.8570000444997377 1.4205985793284697 1.447714538416426 1.667668377301516 1.4869908227676085 1.0 16.895929775021454 -1.913573296203258 0.05962327197962898 2.648836570245397e-10 4.721105936102806 0.8361857159383977 0.1235432074788701 122.56937574014844 0.6481704046375322 11.839931379124922 52.696011842523205 0.012201878713496097 1.913573296203258 4.721105935837922 up VAEKLEALS(ph)VK ddPTM_KYSE-520_SHP099_60min_R1 2 VAEKLEALSVK 11 1 P43487-2;P43487;F6WQW2;C9JXG8 P43487-2 RANBP1 Ran-specific GTPase-activating protein 1 VAEKLEALS(1)VK;VAEKLEALS(1)VK 119.31 0.00015424 1311520000.0 1900220.0 1806970.0 1751330.0 1461250.0 1473930.0 1595040.0 1387450.0 1545950.0 2013440.0 1586950.0 True False 1794811.0086053438 1720160.4488827342 1864223.5340270754 1600126.760659168 1589919.9054854808 1585084.7637099554 1527706.9862071055 1540587.4602774428 1647850.0506919671 1572890.857628416 1.1410906229765592 1.0936298857228843 1.1852211645745891 1.0173158251245848 1.0108265921786468 1.0077525443182531 0.9712733587316807 0.9794624037680022 1.0476569576967174 1.0 20.58498713542353 -5.35262592883488 6.005717025321595 1.001929059561209 1.1348877843690997 0.8264405758196179 0.028360625395029457 0.08788171784317234 4.692303068590402 0.007941964724780527 0.011880016780062683 4.4399090227193245e-06 5.35262592883488 0.13295872480789073 VAFDPEQKPLHGVLKT(ph)PTS(ph)SPAS(ph)SPLVAK ddPTM_KYSE-520_SHP099_60min_R1 1 VAFDPEQKPLHGVLKTPTSSPASSPLVAK 29 2 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 3 VAFDPEQKPLHGVLKT(1)PT(0.004)S(0.504)S(0.504)PAS(0.6)S(0.388)PLVAK 128.6 0.00023451 739710000.0 886810.0 772770.0 782300.0 731270.0 708760.0 650680.0 691080.0 717610.0 915610.0 741110.0 True False 837616.8814880938 735644.9692485816 832728.3097242567 800769.6809356576 764535.3797072382 646618.8647625087 760941.1106908397 715120.7784014329 749358.3046497889 734544.3419748545 1.1403217391017189 1.0014983809837374 1.1336664951845254 1.0901583950435905 1.040829444893349 0.8802992927888406 1.0359362494645543 0.9735569897370655 1.0201675539901465 1.0 19.486490058501282 -6.009235721765643 13.844780808337106 0.9811378080474108 1.0852017975855452 0.4908990067525897 0.05246495686806297 1.1411723859545573 1710.092948105076 0.016124110450034472 0.017219404609021275 9.789584924459464e-07 6.009235721765643 0.10406398953813445 VAFISLS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 2 VAFISLSPVR 10 0 Q6ZU65;Q6ZU65-2 Q6ZU65 UBN2 Ubinuclein-2 1 VAFISLS(1)PVR;VAFISLS(1)PVR 149.49 0.00011555 280980000.0 245830.0 219421.0 185363.0 167267.0 196985.0 191033.0 178099.0 195012.0 234221.0 207752.0 True False 232193.31985004473 208879.68580236437 197311.7955712861 183164.00538934284 212486.59880866637 189840.69218690664 196102.98499873801 194335.54888814306 191692.37063092168 205911.47890861027 1.1276365993811308 1.0144149656419663 0.9582360178125816 0.889527899853687 1.0319317793010188 0.9219529343051519 0.9523654826731367 0.9437820072886517 0.9309455288600037 1.0 17.651664732298766 -4.348117025104393 2.0995678876055557 0.9507407402410262 1.1580598799822515 0.6677835885629418 0.037576690091365154 0.31009625086533177 1.7625289122344605 0.009629466247266594 0.11361566385169959 4.48624487173268e-05 4.348117025104393 0.2073191397412253 VAFSEITS(ph)PSKR ddPTM_KYSE-520_SHP099_60min_R1 1 VAFSEITSPSKR 12 1 Q13415 Q13415 ORC1 Origin recognition complex subunit 1 1 VAFS(0.001)EIT(0.324)S(0.667)PS(0.008)KR 46.318000000000005 0.06504299999999999 627850000.0 284490.0 288400.0 233940.0 194620.0 247880.0 261490.0 209750.0 258140.0 273900.0 291400.0 True False 268708.77258324483 274544.83110277425 249020.1467172345 213116.62628536313 267386.7457557282 259857.94391520956 230953.57696273018 257244.5725903292 224166.6644571129 288818.4227057692 0.9303726890614217 0.9505793589298284 0.8622031253557576 0.737891386182361 0.9257953258339262 0.8997277302491786 0.7996497411732345 0.8906792377728427 0.7761508506175882 1.0 18.1398032440115 -4.787886429875836 7.608588929920752 0.8544696713029007 0.9405690248375801 0.15418160735882813 0.07253213614857112 0.2653594539187972 58.88485277210819 0.018130723750537075 0.03944358685016823 1.6297221572093274e-05 4.787886429875836 0.08609935353467935 VAGAAT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 VAGAATPK 8 0 P16402 P16402 HIST1H1D Histone H1.3 1 VAGAAT(1)PK;VAGAAT(1)PK;VAGAAT(1)PK;VAGAAT(1)PK;VAGAAT(1)PK 131.09 0.0037534999999999995 12602100000.0 33652300.0 33971500.0 24155000.0 21881800.0 20916100.0 34184200.0 27088500.0 32422000.0 30919200.0 44551900.0 True False 31785539.834803138 32339458.14773891 25712069.949366502 23961439.692996945 22562078.07367029 33970843.72781487 29826869.938283272 32309535.64935167 25305052.68960338 44157204.82685372 0.7198268087719427 0.732371042835393 0.5822848173970012 0.5426394126836819 0.5109489643227918 0.7693159895654417 0.6754700632714049 0.7316934071357474 0.5730673576107876 1.0 25.396145515900397 -13.999999685606394 0.4255536608713649 7.732559676814646 0.6434521125444576 0.5937614144678638 0.08685218436268431 753.5340883289256 4.820944369859929 4749.395306819292 0.05409598877792789 1.0000007239182931e-14 13.999999685606394 -7.089107564270189 VAGGAAPSKPAS(ph)AK ddPTM_KYSE-520_SHP099_60min_R1 4 VAGGAAPSKPASAK 14 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VAGGAAPS(0.001)KPAS(0.999)AK;VAGGAAPSKPAS(1)AK;VAGGAAPSKPAS(1)AK;VAGGAAPS(0.001)KPAS(0.999)AK 189.67 6.2778e-09 3059830000.0 5827700.0 5419780.0 4655030.0 3934740.0 3931990.0 4777390.0 4096740.0 4967890.0 5615200.0 5507700.0 True False 5504425.863768071 5159405.633544364 4955100.682111338 4308696.5065772785 4241415.243037222 4747572.536927155 4510878.459529423 4950657.549104237 4595621.227672812 5458906.062925765 1.0083386305456792 0.9451354491304654 0.9077094613816441 0.7892966936800487 0.7769716485584632 0.869693026808129 0.826333775949199 0.9068955376841332 0.8418575397155184 1.0 22.380180440668042 -4.745364539714011 2.2215177876694527 0.8509837838109531 0.9966434408739429 0.37397128763318876 0.06096292957946728 0.31178702566498145 2.944479549839236 0.01647204590664637 0.06052818199668768 1.7973616057174084e-05 4.745364539714011 0.14565965706298978 VAGGAAPSKPAS(ph)AKK ddPTM_KYSE-520_SHP099_60min_R1 1 VAGGAAPSKPASAKK 15 2 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 1 VAGGAAPS(0.002)KPAS(0.998)AKK 65.043 0.029227999999999997 410980000.0 1414200.0 1347500.0 1225300.0 1047000.0 1005100.0 1207600.0 1085100.0 1204100.0 1552800.0 1216800.0 True False 1335751.506862192 1282764.077361264 1304284.798549319 1146506.565207972 1084195.6517632839 1200062.9204635234 1194792.4975554638 1199923.2581390543 1270850.6629025373 1206020.0986560746 1.1075698558843947 1.0636340793911385 1.0814784927736656 0.9506529505483189 0.898986387516638 0.9950604652449908 0.990690369826239 0.9949446609357387 1.0537557909015831 1.0 20.201822519671484 -5.250279712627815 24.118698363226045 0.9804980738737086 1.082168156265715 0.5896193346037244 0.03846529619596288 343.56013870395276 742512.378690835 0.011317749228847662 0.01935241030837541 5.619792590493344e-06 5.250279712627815 0.10167008239200648 VAGLET(ph)IS(ph)T(ph)ATGRK ddPTM_KYSE-520_SHP099_60min_R1 1 VAGLETISTATGRK 14 1 H0YEN6;E9PS18;E9PLS9;O76062 H0YEN6 TM7SF2 Delta(14)-sterol reductase 3 VAGLET(0.999)IS(0.706)T(0.706)AT(0.59)GRK 40.477 0.056785 0.0 505690.0 447880.0 434530.0 415910.0 454810.0 505260.0 448730.0 433020.0 569320.0 439210.0 True False 477638.36763197725 426363.1725184146 462540.4990725827 455437.96135209856 490600.95948508504 502106.4849233199 494092.0075827696 431517.95468762825 465945.8393892797 435318.94110020954 1.0972147603428675 0.9794271102489581 1.0625324455296485 1.0462167352540206 1.1269919894713465 1.1534220947388916 1.1350115075030256 0.9912685021171493 1.0703550785354408 1.0 18.73171326882598 -3.9049970192225913 20.759514137547548 1.0672871041290692 3.904654608978039 0.025310628961146886 0.05837143582626675 3832.378904373995 880511.0646630969 0.014967030691133138 26456.758852534836 0.00012445231535188043 3.9049970192225913 2.8373675048489697 VAHALAEGLGVIACIGEK ddPTM_KYSE-520_SHP099_60min_R1 4 VAHALAEGLGVIACIGEK 18 0 P60174;P60174-3;P60174-4;U3KPZ0;U3KQF3 P60174 TPI1 Triosephosphate isomerase 0 ;;; 186.42 3.9108e-12 574304000.0 815414.0 635207.0 511390.0 789024.0 845824.0 598252.0 509848.0 662779.0 576796.0 320238.7 False True 770181.3599324902 604690.7022548551 544355.0176529302 864012.6037312846 912385.536719756 594518.0873576879 561388.4114769683 660479.9743427808 472064.38624390255 317401.63425993867 2.426519831028166 1.9051278789561576 1.7150353334574397 2.722142895533091 2.874545806442037 1.8730782175834748 1.7687004441105514 2.0808965772428105 1.487277743054409 1.0 18.27595003087909 -7.903144145050352 0.7986926385363867 1.0002125575917684 2.2509565800184776 0.5401284510300841 0.3648945600947294 0.5517974570903565 0.8029517735289218 0.38393989169673315 0.1450743661402162 1.2498441302965069e-08 7.903144145050352 1.2507440224267092 VAHEPVAPPEDKESESEAKVDGETAS(ph)DSESR ddPTM_KYSE-520_SHP099_60min_R1 1 VAHEPVAPPEDKESESEAKVDGETASDSESR 31 2 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VAHEPVAPPEDKESESEAKVDGET(0.332)AS(0.626)DS(0.021)ES(0.021)R 141.9 1.1548e-06 654620000.0 386020.0 417840.0 350850.0 428570.0 333180.0 328880.0 313300.0 402040.0 650130.0 279640.0 True False 364606.70108820795 397766.3392093731 373466.3523798484 469301.16394573124 359399.3704651183 326827.3379281579 344971.4215133414 400645.41707684175 532082.7804436035 277162.6071566278 1.3154974432830489 1.4351370961977952 1.3474629792640038 1.693234050437849 1.2967094448711747 1.1791898672084 1.2446535449076435 1.4455247812358483 1.9197495142009446 1.0 18.08037310670063 -4.245056235605672 20.532403961038913 1.4028674384306232 1.315496666250195 0.008730702072965446 0.24617990963493497 1853.7878660322885 2322797.0499595073 0.060699566917764555 1.1606618640408237 5.687792764010813e-05 4.245056235605672 -0.08737077218042821 VAIEHLDK ddPTM_KYSE-520_SHP099_60min_R1 4 VAIEHLDK 8 0 B7ZAR1;E9PCA1;P48643;E7ENZ3;P48643-2 B7ZAR1 CCT5 T-complex protein 1 subunit epsilon 0 ;;; 141.52 0.0010119 4738400000.0 8105200.0 7510500.0 5234130.0 4506390.0 7048200.0 7279000.0 5303540.0 6533500.0 6183100.0 6175200.0 False True 7655588.39868437 7149684.306509665 5571530.394704105 4934675.950704439 7602853.241227714 7233569.060992048 5839673.580762426 6510836.813430357 5060404.903266801 6120492.532232905 1.250812472749056 1.1681550575965307 0.9103075226972747 0.8062547131160617 1.2421963103766762 1.1818606138145333 0.9541182429368917 1.0637766126078492 0.8267970063874323 1.0 22.545216324401945 -4.594005419773908 5.67117980370542 1.0077892027582553 1.2318530430512797 0.2961569296878752 0.13220510246225525 0.24069213469433579 13.542430406382188 0.035760306584280026 0.09956485526792247 2.5467984696391407e-05 4.594005419773908 0.2240638402930244 VAILVDDMADTCGTICHAADK ddPTM_KYSE-520_SHP099_60min_R1 2 VAILVDDMADTCGTICHAADK 21 0 B1ALA9;A0A2R8Y7H4;P60891-2;P60891;P11908;P11908-2;B7ZB02 B1ALA9 PRPS1;PRPS2 Ribose-phosphate pyrophosphokinase 1;Ribose-phosphate pyrophosphokinase 2 0 ; 246.31 1.9041e-26 596720000.0 665090.0 559430.0 311520.0 503150.0 333130.0 412380.0 391040.0 484500.0 368020.0 383020.0 False True 628196.131875955 532554.1430784512 331601.07764962356 550969.2247224367 359345.43574957986 409806.18345540616 430570.1393826274 482819.3825831498 301196.84502923285 379626.74078505085 1.6547731347293237 1.4028362226990474 0.8734924124783402 1.4513446117706499 0.94657566800081 1.0794976734461477 1.13419338820081 1.2718265883607178 0.7934026049017818 1.0 18.534222093348024 -4.553513258247949 5.094699108865786 1.0909571749105016 1.6037262935727683 0.5207720338844146 0.1826219588220628 0.12249073132395087 8.135588801912148 0.04413162560174798 0.13345557355193893 2.7956753792177062e-05 4.553513258247949 0.5127691186622667 VALENDDRS(ph)EEEKYTAVQR ddPTM_KYSE-520_SHP099_60min_R1 1 VALENDDRSEEEKYTAVQR 19 2 Q99700;A0A2R8Y5A6;Q99700-4;Q99700-2;Q99700-5;H0YH87;A0A5F9ZHW5;A0A2R8Y7P6;A0A2R8YDM9;A0A5F9ZHX3;F8VQP2;V9GY86;A0A5F9ZI57;A0A2R8Y7E6;A0A5F9ZHH4;F8W0B5;A0A5F9ZH85;F8WB06;F8VRK6 Q99700;F8WB06 ATXN2 Ataxin-2 1 VALENDDRS(1)EEEKYTAVQR 109.39 3.6021e-05 307660000.0 141060.0 151370.0 124850.0 124280.0 131000.0 126380.0 118190.0 129860.0 163610.0 134620.0 True False 133235.12060386135 144097.95798899795 132898.03076706303 136091.5338338556 141308.9547119593 125591.2155417194 130137.79862324236 129409.54596955176 133902.54827246527 133427.37153277503 0.9985591342562987 1.0799729945485872 0.9960327423104339 1.019967134707635 1.059070212420757 0.9412702513656971 0.9753455915998119 0.9698875461828586 1.0035613138011454 1.0 17.02569512839499 -6.2572757533905845 24.999927280931892 0.9759642029531256 1.0309321956092938 0.45892961393019316 0.028571433727211736 319.07281714547406 1915831.3065581925 0.009303808949554723 0.008979327602455974 5.529988734924954e-07 6.2572757533905845 0.05496799265616825 VALHLDEEDKLR ddPTM_KYSE-520_SHP099_60min_R1 1 VALHLDEEDKLR 12 1 F8WEP1;B8ZZA3;A0A087X297;Q16719-2;Q16719 F8WEP1 KYNU Kynureninase 0 231.83 2.6626e-12 298170000.0 693860.0 560960.0 418490.0 360770.0 583670.0 530450.0 451340.0 470700.0 512020.0 508370.0 False True 655370.2026243828 534010.6395818744 445466.5350076751 395057.4723305448 629601.5083719781 527139.2647895629 496965.8518539155 469067.2515622062 419050.0749738263 503866.23730587476 1.3006829076871382 1.05982619997954 0.8840968138479424 0.7840522803093135 1.2495409728947071 1.0461889004671692 0.9863051243741693 0.9309360636470991 0.831669288290574 1.0 18.942681262946735 -4.329486665458948 3.218263739154857 0.9692069519522576 1.325131829908507 0.4084496076272657 0.12190439099798234 0.30199122194076367 5.068683468089175 0.032878512554933945 0.24207286195500083 4.6828832943814046e-05 4.329486665458948 0.3559248779562495 VALS(ph)DDETK ddPTM_KYSE-520_SHP099_60min_R1 1 VALSDDETK 9 0 Q15054-3;Q15054-2;Q15054;H0YD46 Q15054-3 POLD3 DNA polymerase delta subunit 3 1 VALS(1)DDETK 151.79 0.00010493 350240000.0 2379600.0 2196400.0 1892800.0 2155500.0 2374200.0 2052300.0 2384000.0 2440600.0 2425100.0 2180400.0 True False 2247598.844385004 2090881.6471363888 2014812.9165870806 2360358.071925296 2561036.032649875 2039490.8344379673 2624997.9855978484 2432134.1282403236 1984762.9717960749 2161083.352325532 1.0400333897192688 0.9675155032249915 0.9323161526458243 1.0922105662353676 1.1850704554703806 0.943735387273832 1.2146676262038203 1.125423563891284 0.9184111152678495 1.0 21.04332328690226 -5.273766913917112 24.47448976160626 1.0794772203193055 0.9787110638416627 0.15011212539987384 0.09403329498331386 915.0506973759301 1816695.855899199 0.026072611048555724 0.038993495621488065 5.3239391870672814e-06 5.273766913917112 -0.10076615647764275 VALS(ph)DDETKETENMR ddPTM_KYSE-520_SHP099_60min_R1 14 VALSDDETKETENMR 15 1 Q15054-3;Q15054-2;Q15054;H0YD46 Q15054-3 POLD3 DNA polymerase delta subunit 3 1 VALS(0.887)DDET(0.019)KET(0.094)ENMR;VALS(0.946)DDET(0.052)KET(0.002)ENMR;VALS(1)DDETKETENMR;VALS(1)DDETKETENMR;VALS(1)DDETKETENMR;VALS(0.951)DDET(0.049)KETENMR;VALS(1)DDETKETENMR;VALS(1)DDETKETENMR;VALS(1)DDETKETENMR;VALS(1)DDETKETENMR;VALS(1)DDETKETENMR;VALS(1)DDETKETENMR;VALS(1)DDETKETENMR;VALS(1)DDETKETENMR 294.65 1.9621e-33 37382340000.0 24964180.0 21867860.0 21115320.0 20440910.0 21096720.0 21215270.0 20655480.0 22314970.0 26161630.0 20737270.0 True False 23579367.170540944 20817295.181272954 22476447.312906537 22383607.94061632 22756911.84008308 21082857.630525194 22743537.496458344 22237564.577423178 21411337.473023545 20553553.92115195 1.1472160610761863 1.0128319054277801 1.0935552751184168 1.089038325268947 1.1072008241194542 1.0257524178739974 1.1065501170117666 1.0819328210941752 1.0417340745625912 1.0 24.29288453651855 -7.994989072394487 2.9135789988094256 1.000316584483699 1.080923496898143 0.3382552332096046 0.036978284266256385 0.2703495035107675 5.47715589847755 0.03325745108211943 0.00893256035265558 1.0116049076809148e-08 7.994989072394487 0.08060691241444395 VALS(ph)DDETKETENMRK ddPTM_KYSE-520_SHP099_60min_R1 3 VALSDDETKETENMRK 16 2 Q15054-3;Q15054-2;Q15054;H0YD46 Q15054-3 POLD3 DNA polymerase delta subunit 3 1 VALS(1)DDETKETENMRK;VALS(1)DDETKETENMRK;VALS(1)DDETKETENMRK 153.06 3.1867000000000003e-06 1198300000.0 1555220.0 1452360.0 1431340.0 1222010.0 1230370.0 1337510.0 1105130.0 1197240.0 1793010.0 1195030.0 True False 1468948.846345791 1382586.4455631943 1523606.466624973 1338149.4629892972 1327193.119152313 1329162.1039658578 1216847.3254294272 1193087.053877917 1467444.5821038657 1184442.96391927 1.240202264771875 1.1672883268167478 1.2863485309443907 1.1297711276543188 1.1205209196065373 1.1221832916020864 1.0273583131457276 1.0072980212825478 1.2389322464698136 1.0 20.17577729753339 -5.6493256819628375 1.6013958161867785 1.0777145933620165 1.2253956293893156 0.44240298951969415 0.07175119121361478 0.3589019705523503 1.8955421146692213 0.024794360763341555 0.03702135518052116 2.242199844101784e-06 5.6493256819628375 0.1476810360272991 VANRIS(ph)DPNLPPR ddPTM_KYSE-520_SHP099_60min_R1 1 VANRISDPNLPPR 13 1 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 1 VANRIS(1)DPNLPPR 88.551 0.0031820999999999998 0.0 204340.0 191000.0 173960.0 160830.0 185440.0 201870.0 178400.0 212470.0 227990.0 211590.0 True False 193004.85285830914 181824.073303155 185173.73994584125 176115.23484469744 200033.07299073072 200610.05445012564 196434.41301621508 211732.99116087085 186592.76316019453 209715.47721452903 0.9203176390308775 0.867003598008923 0.8829760321238345 0.8397817709207025 0.9538307598828595 0.9565820182404136 0.9366710346097725 1.009620243451455 0.8897424531491253 1.0 17.67807381215496 -5.782401988877009 23.23372059689253 0.9571107196684357 0.8771583681903264 0.5436831245849911 0.03600102831540494 77.18310632722269 85544.48690647917 0.010502410167145738 0.011925455143415475 1.6504334273784547e-06 5.782401988877009 -0.07995235147810931 VANS(ph)PTMVNLLLGK ddPTM_KYSE-520_SHP099_60min_R1 2 VANSPTMVNLLLGK 14 0 Q6UB99;A0A087WTN8;A0A2R8Y438 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 VANS(0.982)PT(0.018)MVNLLLGK;VANS(0.824)PT(0.176)MVNLLLGK 97.79700000000001 0.0016222 1047130000.0 284439.0 338795.0 251563.0 208386.0 214548.0 343899.0 243279.0 329985.0 384803.0 276223.0 True False 268660.60165491106 322518.7796583376 267779.15349503147 228190.94278646458 231431.70698886586 341752.5987781433 267872.0154942364 328840.3590540782 314932.4752942335 273775.87911824224 0.9813158212483652 1.178039426618163 0.9780962236610303 0.83349542524128 0.8453327142414611 1.2482933115906178 0.978435413510421 1.201129771231796 1.150329518833235 1.0 18.06263581873377 -6.2602435795280424 24.999482477121177 1.119633073831238 0.9688038876889197 0.29836422460257006 0.11660284363054313 154.74110619166242 3235045.6133013745 0.041871165872090624 0.03965650739497 5.492327433571887e-07 6.2602435795280424 -0.15082918614231822 VANSPT(ph)MVNLLLGK ddPTM_KYSE-520_SHP099_60min_R1 2 VANSPTMVNLLLGK 14 0 Q6UB99;A0A087WTN8;A0A2R8Y438 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 VANS(0.017)PT(0.983)MVNLLLGK;VANS(0.034)PT(0.966)MVNLLLGK 115.24 0.0039533 45280000.0 193605.0 233200.0 188608.0 161563.0 164434.0 228140.0 154210.0 215680.0 251630.0 227120.0 True False 182865.34470800083 221996.7219596636 200765.9734634697 176917.8989443126 177374.02029852144 226716.09363576394 169799.0517445655 214931.85642009063 205940.3350760983 225107.89349668627 0.8123453241353916 0.9861791983892895 0.8918655420958177 0.7859249011493101 0.7879511355346253 1.00714413037276 0.754300744887318 0.9547948456247917 0.9148516823517335 1.0 17.780257120784018 -7.877459706025593 1.4268598734844418 0.9947477284047773 0.8674592682244873 0.20135986173982345 0.08267292168966177 0.6504740813237756 2.8891171357624263 0.07715521751925089 0.023440167467287464 1.325990137822711e-08 7.877459706025593 -0.12728846018029005 VAPEEHPVLLTEAPLNPK ddPTM_KYSE-520_SHP099_60min_R1 8 VAPEEHPVLLTEAPLNPK 18 0 P60709;A0A2R8Y793;G5E9R0;E7EVS6;A0A2R8YGF8;P63261;I3L3I0;I3L1U9;I3L4N8;K7EM38;I3L3R2;J3KT65 P60709;P63261 ACTB;ACTG1 Actin, cytoplasmic 1;Actin, cytoplasmic 1, N-terminally processed;Actin, cytoplasmic 2;Actin, cytoplasmic 2, N-terminally processed 0 ;;;;;;; 253.02 5.2317e-24 20123550000.0 9383680.0 9778730.0 7667540.0 6869380.0 8819990.0 9662140.0 6971570.0 8656880.0 8741160.0 7793190.0 False True 8863148.564497687 9308945.132627027 8161801.896897768 7522243.809845586 9514073.03412162 9601835.000271153 7676324.33156644 8626851.303810978 7153985.690711718 7724148.399610073 1.1474596429225923 1.2051742989682794 1.056660420624465 0.9738606019306051 1.231731000222873 1.2430930250842758 0.9938084995821613 1.1168676283131063 0.9261843921943372 1.0 22.88094445154708 -7.410185048692587 1.5439621185802792 0.9757137136196398 1.1319821850780034 0.3045964968616288 0.09119747508661714 0.557213401303484 2.3434649617797247 0.08189613386923536 0.028573907182281116 3.8887941191913375e-08 7.410185048692587 0.15626847145836364 VAPLWHSS(ph)SEVISMADR ddPTM_KYSE-520_SHP099_60min_R1 2 VAPLWHSSSEVISMADR 17 0 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 VAPLWHS(0.027)S(0.964)S(0.009)EVISMADR;VAPLWHS(0.005)S(0.898)S(0.097)EVISMADR 190.71 1.74e-12 404670000.0 211950.0 213590.0 190455.0 240200.0 187868.0 182128.0 176909.0 200708.0 233600.0 207252.0 True False 200192.71098815018 203328.81579487395 202732.0340387742 263028.5357812369 202652.14277730027 180991.27159504849 194792.68818545752 200011.79079359936 191184.1285767859 205415.90851961588 0.97457257537107 0.9898396733739703 0.986934437063888 1.280468186114803 0.9865455126517053 0.8810966633471088 0.94828433488566 0.9736918247230084 0.9307172455853343 1.0 17.64818839053111 -5.99084644069527 24.999970147871682 0.9439437804386512 1.0587020084141736 0.2702119694735341 0.08620985570998124 280.56301931253967 766261.1052551755 0.02785765031070973 0.031546471138013184 1.0213005347538334e-06 5.99084644069527 0.11475822797552238 VAPVINNGS(ph)PTILGK ddPTM_KYSE-520_SHP099_60min_R1 5 VAPVINNGSPTILGK 15 0 H0Y4T7;E7ESY4;Q13330-3;Q13330;F8W9Y9 H0Y4T7 MTA1 Metastasis-associated protein MTA1 1 VAPVINNGS(0.879)PT(0.121)ILGK;VAPVINNGS(0.993)PT(0.007)ILGK;VAPVINNGS(0.833)PT(0.167)ILGK;VAPVINNGS(0.911)PT(0.089)ILGK;VAPVINNGS(0.982)PT(0.018)ILGK 217.32 3.3455e-14 11365420000.0 10021860.0 10382000.0 7469290.0 6414050.0 7022400.0 10332600.0 6746240.0 8326010.0 10151760.0 10283960.0 True False 9465927.447717387 9883233.1363003 7950772.384686543 7023639.383545552 7575022.928009636 10268110.410716634 7428215.776157567 8297129.014615348 8308456.289043958 10192852.115199817 0.9286828986365432 0.9696239114037761 0.7800341155573293 0.6890749815816261 0.7431701002228401 1.0073834383807638 0.7287671489985065 0.8140144604121624 0.8151257562791671 1.0 23.281054460241144 -4.758725463800393 24.99982556756407 0.8112542857515831 0.9491534468444444 0.19532791103903513 0.10114067425433358 99.29928296432566 914667.8077812035 0.025784084476078096 0.06215569213591111 1.7429082924360025e-05 4.758725463800393 0.13789916109286127 VAQGATEKS(ph)PEDK ddPTM_KYSE-520_SHP099_60min_R1 7 VAQGATEKSPEDK 13 1 P49321-4;P49321;P49321-3 P49321-4 NASP Nuclear autoantigenic sperm protein 1 VAQGATEKS(1)PEDK;VAQGATEKS(1)PEDK;VAQGATEKS(1)PEDK;VAQGATEKS(1)PEDK;VAQGATEKS(1)PEDK;VAQGATEKS(1)PEDK;VAQGAT(0.003)EKS(0.997)PEDK 276.36 1.7403e-22 10115820000.0 10046370.0 7908820.0 7728910.0 8164170.0 8694630.0 8317790.0 8875240.0 9134920.0 9586150.0 8704450.0 True False 9489077.829157911 7528868.415819152 8227127.9052932365 8940090.262152787 9378847.915322447 8265875.587282452 9772435.873195251 9103233.094626354 7845546.807176176 8627335.344959635 1.0998851267212806 0.8726759903007314 0.9536116977416192 1.0362516240168957 1.0871083063673732 0.958102966533188 1.132729340224919 1.0551616148715899 0.9093823867365716 1.0 23.040483604020665 -5.265359662375226 24.295273842418244 1.0320546254529301 0.9651194410615416 0.06988121992639273 0.0788052595916566 473.1455517255834 2932244.7118181805 0.021474545847130204 0.033331828600358625 5.42800623218509e-06 5.265359662375226 -0.06693518439138857 VAQNSPS(ph)VENIQTSQAEQAKPLQEDILMQNIETVHPFR ddPTM_KYSE-520_SHP099_60min_R1 1 VAQNSPSVENIQTSQAEQAKPLQEDILMQNIETVHPFR 38 1 Q92576-2;Q92576 Q92576-2 PHF3 PHD finger protein 3 1 VAQNS(0.131)PS(0.758)VENIQT(0.111)SQAEQAKPLQEDILMQNIETVHPFR 218.93 8.6649e-23 458450000.0 203030.0 197590.0 149950.0 155080.0 140460.0 175570.0 137810.0 150780.0 239530.0 164530.0 True False 191767.52116972936 188097.4798113634 159616.0169284828 169818.75657349784 151513.40289192184 174474.20250561534 151741.17969598973 150256.97937231645 196037.39005992058 163072.39220240296 1.175965585466548 1.153459989584869 0.9788046570775134 1.0413703649034682 0.9291174357941945 1.0699187038910953 0.9305142191552014 0.9214127378828157 1.2021494712397545 1.0 17.31515303205971 -4.735013714190198 8.347987891192801 1.0039964096210545 1.1657876772021538 0.3766395097554388 0.07983194293858764 0.2111534828229242 55.64193806711061 0.01953527325194529 0.05031593619443574 1.840713874322962e-05 4.735013714190198 0.1617912675810993 VAQQPLSLVGCEVVPDPSPDHLY(ph)SFR ddPTM_KYSE-520_SHP099_60min_R1 3 VAQQPLSLVGCEVVPDPSPDHLYSFR 26 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 VAQQPLSLVGCEVVPDPSPDHLY(0.963)S(0.037)FR;VAQQPLSLVGCEVVPDPSPDHLY(0.943)S(0.057)FR;VAQQPLSLVGCEVVPDPSPDHLY(0.981)S(0.019)FR 253.84 8.562100000000001e-35 2061930000.0 198172.0 380227.0 403628.0 619850.0 211355.0 295364.0 164380.0 178644.0 278568.0 316598.0 True False 187179.0041139121 361960.3241876379 429646.5067076344 678760.357635302 227987.4360545506 293520.52371628705 180997.13459420062 178024.3256598232 227987.073327817 313793.1880295166 0.5965043578202383 1.1534996233047305 1.3692027841828747 2.1630818753511476 0.7265531718078763 0.9353948234487403 0.5768038998258156 0.5673301156654731 0.7265520158658499 1.0 18.25945450837856 -5.903800756528172 22.44168889165838 0.7334765584794519 1.328728905948796 0.34820040620653536 0.3779903797234206 8.144624068215808 1890.2246621503978 0.1223976950519431 0.13878612398105206 1.2479559139660138e-06 5.903800756528172 0.595252347469344 VAQRS(ph)PVDSGTILR ddPTM_KYSE-520_SHP099_60min_R1 3 VAQRSPVDSGTILR 14 1 P49454 P49454 CENPF Centromere protein F 1 VAQRS(1)PVDSGTILR;VAQRS(0.884)PVDS(0.095)GT(0.021)ILR;VAQRS(1)PVDSGTILR 145.43 2.8007e-06 1351130000.0 614890.0 587740.0 619350.0 470886.0 567004.0 606687.0 531320.0 521670.0 721000.0 599520.0 True False 580780.8259471746 559504.0881842745 659274.2919950385 515638.8638629617 611623.9889885474 602900.441393884 585031.0107834936 519860.4485286934 590084.574930919 594208.7192195017 0.977402059515443 0.9415952174501713 1.1094995254546265 0.8677739777030835 1.0293083376358407 1.0146273891534257 0.9845547395398992 0.8748785262046215 0.9930594349170779 1.0 19.18061024938874 -7.03289160084286 24.9486230397096 0.9463247127587856 0.9903324652190317 0.04489730128865421 0.06636488233082372 1659.8296385421731 1258991.4590162486 0.029708676420284484 0.017170551097784564 9.270611873850258e-08 7.03289160084286 0.04400775246024613 VARPPAAPELGALGS(ph)PDLSSLSLAVSR ddPTM_KYSE-520_SHP099_60min_R1 3 VARPPAAPELGALGSPDLSSLSLAVSR 27 1 Q01201;D6R992;D6RIV7 Q01201 RELB Transcription factor RelB 1 VARPPAAPELGALGS(0.633)PDLS(0.232)S(0.087)LS(0.033)LAVS(0.014)R;VARPPAAPELGALGS(0.999)PDLS(0.001)SLSLAVSR;VARPPAAPELGALGS(1)PDLSSLSLAVSR 215.15 1.7987e-22 1217202000.0 437164.0 527911.0 452356.0 377036.0 369922.0 490210.0 367838.0 385743.0 543720.0 463995.0 True False 412913.64145517134 502549.3631494337 481515.59155519045 412869.3880799931 399032.7568317359 487150.41755583324 405022.6547929292 384404.94756609283 444994.1540657965 459884.3652826475 0.8978640558945559 1.0927733167022629 1.0470362288990804 0.8977678287154669 0.8676806322530407 1.0592889307215911 0.8807054237297239 0.8358730511089139 0.9676218363985926 1.0 18.81091162559539 -5.261604290355418 24.99933775437325 0.9237650469634933 1.0205794139457254 0.18704550148382104 0.07776460945899147 21.1324298574736 3203779.036468114 0.021450147602420866 0.03428715024015972 5.475146064303904e-06 5.261604290355418 0.09681436698223211 VAS(ph)DTEEADR ddPTM_KYSE-520_SHP099_60min_R1 2 VASDTEEADR 10 0 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VAS(0.995)DT(0.005)EEADR;VAS(0.996)DT(0.004)EEADR 181.31 4.0144e-07 1015720000.0 3191500.0 2965600.0 2800600.0 2666600.0 2791200.0 2781200.0 2740300.0 2742900.0 3552800.0 2583500.0 True False 3014461.132902484 2823128.124543648 2981131.1571184327 2920032.862257478 3010851.5602444266 2763841.49916624 3017316.2667507525 2733385.520097674 2907701.0787996748 2560612.199932587 1.1772423535988172 1.1025207661737972 1.1642259445600223 1.140365129219627 1.1758327013843382 1.0793674650300438 1.1783573736117439 1.0674734425500416 1.1355491779958815 1.0 21.28805734525921 -10.463076720920165 0.26546483378797386 0.8890316919114436 1.1546763481344933 0.5732435998230566 0.036655002796639836 14.506800386805525 0.7431202098234433 1.1248374434414248 0.04834702712159835 3.442891045008468e-11 10.463076720920165 0.26564465622304967 VAS(ph)FRK ddPTM_KYSE-520_SHP099_60min_R1 3 VASFRK 6 1 P30086 P30086 PEBP1 Phosphatidylethanolamine-binding protein 1;Hippocampal cholinergic neurostimulating peptide 1 VAS(1)FRK;VAS(1)FRK;VAS(1)FRK 73.665 0.023106 1288530000.0 2159590.0 1901350.0 1929920.0 1775200.0 1971300.0 1879950.0 1673750.0 1935950.0 2459000.0 1937630.0 True False 2039793.2376640686 1810006.2920154664 2054325.7311811792 1943914.4742666588 2126430.0948372893 1868216.5347179563 1842948.9842258424 1929234.6413041246 2012507.5863455308 1920464.105653328 1.0621355700736441 0.9424837916456217 1.0697027479627443 1.0122107820418509 1.1072480285247994 0.9727942996791407 0.9596372974640339 1.0045668834033288 1.0479277276889747 1.0 20.873023568819356 VAS(ph)FSIPGSSSR ddPTM_KYSE-520_SHP099_60min_R1 4 VASFSIPGSSSR 12 0 Q14573 Q14573 ITPR3 Inositol 1,4,5-trisphosphate receptor type 3 1 VAS(0.974)FS(0.026)IPGSSSR;VAS(0.994)FS(0.006)IPGSSSR;VAS(0.999)FS(0.001)IPGSSSR;VAS(0.993)FS(0.007)IPGSSSR 128.21 8.0321e-05 3070320000.0 2949710.0 3018500.0 2389480.0 2493880.0 2469100.0 3060240.0 2742230.0 3148910.0 3629870.0 2654980.0 True False 2786083.706198899 2873486.729139132 2543509.7041031793 2730897.605387634 2663404.122742732 3041139.9070216063 3019441.3699857383 3137987.16617112 2970777.109576273 2631458.9427431845 1.058760089676537 1.0919747530408526 0.9665777652041487 1.0377884150230325 1.0121397219924875 1.1556858659749207 1.1474400458774017 1.192489502762259 1.1289467835965412 1.0 21.32743145472568 -6.262680342499404 24.985362539299278 1.1383510116644489 1.0332257298230692 0.3880713071043258 0.056173275232553964 102.42196040119333 2062134.5667829742 0.01865150200541331 0.017369020143042764 5.461597078101655e-07 6.262680342499404 -0.1051252818413797 VAS(ph)LPGDFK ddPTM_KYSE-520_SHP099_60min_R1 2 VASLPGDFK 9 0 A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;Q7Z5J4;A8MXE8;Q7Z5J4-4 A0A1W2PQJ7 RAI1 Retinoic acid-induced protein 1 1 VAS(1)LPGDFK;VAS(1)LPGDFK 128.01 0.00061791 566090000.0 1307650.0 1041040.0 938720.0 954640.0 1006870.0 1024680.0 995400.0 1237700.0 1199570.0 1119350.0 True False 1235112.0477643516 991026.8757671032 999231.3932051044 1045368.6985770183 1086104.9406933598 1018284.5920342524 1096024.7461678283 1233406.7075813515 981758.3266988646 1109433.4298411235 1.1132818018123232 0.8932729527620447 0.9006681846140145 0.9422545512502903 0.9789726102348435 0.9178419945215422 0.9879139357868318 1.1117446747192228 0.8849186443205135 1.0 20.08139167235309 -6.9903791338582115 23.489111458782787 1.0089648459931242 0.9524916671552489 0.05005881966821257 0.0775139712494747 229.3209843220541 559877.9360329718 0.031338698854852645 0.02109299261961405 1.0224000596249792e-07 6.9903791338582115 -0.05647317883787528 VAS(ph)LTLHNK ddPTM_KYSE-520_SHP099_60min_R1 2 VASLTLHNK 9 0 Q9P0K7-3;Q9P0K7;Q9P0K7-2;Q9P0K7-4 Q9P0K7-3 RAI14 Ankycorbin 1 VAS(0.996)LT(0.004)LHNK;VAS(0.967)LT(0.033)LHNK 117.25 0.00054043 839760000.0 917220.0 845160.0 851740.0 901590.0 900500.0 873810.0 910480.0 1030420.0 1197220.0 1014060.0 True False 866339.9781672601 804557.2449889776 906644.5232321846 987276.8425270813 971364.226855871 868356.2276666375 1002520.2038284941 1026845.7135218357 979835.027460187 1005076.2173267421 0.8619644592442087 0.8004937646708066 0.9020654430005698 0.9822905223575951 0.9664582746166885 0.8639705255152227 0.9974568958510963 1.0216595476241546 0.9748862927692284 1.0 19.93887347788262 -4.376237965848622 0.40870199374027877 0.9992226220538928 0.7026029666668254 0.5779617218691295 0.04592006083671113 3.8128440787192437 0.5377792633244934 0.04007925960262792 0.5518078335036362 4.2049616000635886e-05 4.376237965848622 -0.29661965538706736 VAS(ph)PLDQNGSFNVVIK ddPTM_KYSE-520_SHP099_60min_R1 1 VASPLDQNGSFNVVIK 16 0 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 VAS(1)PLDQNGSFNVVIK 106.4 0.0005317 354840000.0 256140.0 350120.0 361050.0 178810.0 185680.0 269280.0 216100.0 280660.0 254730.0 350640.0 True False 241931.40359756915 333299.7096591658 384323.8607004252 195804.04863881317 200291.9596253172 267599.32363565604 237945.49693275843 279686.45596653613 208477.4532207393 347533.6023937917 0.6961381631334621 0.9590431180277715 1.1058610104266877 0.5634104077710069 0.576324010817134 0.7699955394023689 0.6846690371630351 0.8047752909073301 0.5998771105434365 1.0 18.40679295058428 -5.268339401020367 24.99918476472015 0.701371589611177 0.9242170009289973 0.2717770933786854 0.15364185366318098 643.7622184984158 2332388.3823931306 0.042202857253731074 0.06415974755946705 5.390891598172186e-06 5.268339401020367 0.22284541131782032 VAS(ph)PMNK ddPTM_KYSE-520_SHP099_60min_R1 6 VASPMNK 7 0 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 1 VAS(1)PMNK;VAS(1)PMNK;VAS(1)PMNK;VAS(1)PMNK;VAS(1)PMNK;VAS(1)PMNK 131.22 0.0020017 4962960000.0 11610930.0 10459500.0 8975200.0 8140770.0 9015610.0 10226290.0 8750700.0 9656260.0 10881150.0 9985250.0 True False 10966848.567084884 9957009.919970423 9553755.75282774 8914466.333188258 9725087.215196086 10162463.93086034 9635306.154601984 9622764.687848039 8905407.451469582 9896788.453406941 1.1081219547851988 1.0060849503702134 0.9653389882794642 0.9007433446876879 0.9826508125318424 1.026844615170282 0.9735790756732864 0.9723118497632866 0.8998280091966521 1.0 23.238529010271854 -4.308631335685382 2.4092252122769904 0.965235308537413 1.1326888271233764 0.5733887754312379 0.03729022187921453 0.36580317770898596 2.8140653571064256 0.010244858580536854 0.12181889691748808 4.9132477542329726e-05 4.308631335685382 0.16745351858596336 VAS(ph)PMNKS(ph)PSAMQQQDGLDR ddPTM_KYSE-520_SHP099_60min_R1 1 VASPMNKSPSAMQQQDGLDR 20 1 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 2 VAS(0.984)PMNKS(0.577)PS(0.439)AMQQQDGLDR 83.87899999999999 0.0019691 442630000.0 404130.0 404310.0 343340.0 339930.0 387410.0 362920.0 347280.0 384170.0 473500.0 388660.0 True False 381712.10328681825 384886.34071831737 365472.2457634229 372236.84499631857 417896.96293862676 360654.8816616618 382386.45152618346 382837.4039359518 387524.33596364746 385216.77477290464 0.9909020797753356 0.9991422127066453 0.9487443686191454 0.9663048687735936 1.0848358386910537 0.9362387758795739 0.9926526479840092 0.9938232938107238 1.0059902925881232 1.0 18.55531100304587 VAS(ph)PTSGVK ddPTM_KYSE-520_SHP099_60min_R1 9 VASPTSGVK 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 VAS(0.823)PT(0.137)S(0.04)GVK;VAS(0.9)PT(0.09)S(0.009)GVK;VAS(0.97)PT(0.027)S(0.003)GVK;VAS(0.928)PT(0.07)S(0.001)GVK;VAS(0.73)PT(0.27)SGVK;VAS(0.95)PT(0.046)S(0.003)GVK;VAS(0.959)PT(0.041)S(0.001)GVK;VAS(0.762)PT(0.236)S(0.002)GVK;VAS(0.965)PT(0.028)S(0.007)GVK 158.47 0.00015603 17163500000.0 29402900.0 29586100.0 22053540.0 19952450.0 21453970.0 29058600.0 22999160.0 28484400.0 31061100.0 29984900.0 True False 27771862.523771986 28164739.346358493 23475146.4753116 21848724.849077184 23142275.38260865 28877234.49865966 25324139.542970903 28385594.26470896 25421187.226611335 29719257.113899235 0.9344736450623968 0.9476932494785101 0.7898968128760069 0.7351706257441702 0.7786962942551268 0.9716674406761744 0.8521121320736916 0.9551246236041835 0.8553776135515259 1.0 24.82489471779031 -6.263107980710086 24.995021172880843 0.9193801354341925 0.8350306990028193 0.2581509972708633 0.07543004878202544 253.10358097619448 3791359.820523237 0.028029114058305205 0.026018118200859457 5.456221835769336e-07 6.263107980710086 -0.08434943643137316 VAS(ph)PTSGVKR ddPTM_KYSE-520_SHP099_60min_R1 3 VASPTSGVKR 10 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 VAS(0.986)PT(0.013)SGVKR;VAS(0.96)PT(0.039)SGVKR;VAS(0.955)PT(0.034)S(0.011)GVKR 97.95700000000001 0.0016021000000000002 4933500000.0 3434600.0 3112960.0 3207140.0 2369000.0 2725240.0 2618940.0 1905820.0 2047510.0 3477800.0 2461650.0 True False 3244075.8912946456 2963408.728951777 3413877.376005437 2594149.047734177 2939700.88350549 2602594.2240135325 2098478.8846107763 2040407.6657024275 2846319.1882035374 2439841.696134722 1.3296255640003276 1.2145905751371113 1.399220851669932 1.0632448211061867 1.2048736146130554 1.0667061834940557 0.8600881311009875 0.8362869070296278 1.1665999448705098 1.0 21.218356113993345 -5.957340506390352 1.096203171640218 0.9564452291820079 1.29658069092615 0.5761947686943238 0.1143234718529898 0.347517035969212 0.8895902092303631 0.05370781405766714 0.06538430739062241 1.1032133119129412e-06 5.957340506390352 0.340135461744142 VAS(ph)SPAPPEGPSHPR ddPTM_KYSE-520_SHP099_60min_R1 4 VASSPAPPEGPSHPR 15 0 O14578-4;H7BYJ3;O14578;O14578-3 O14578-4 CIT Citron Rho-interacting kinase 1 VAS(0.548)S(0.452)PAPPEGPSHPR;VAS(0.559)S(0.441)PAPPEGPSHPR;VAS(0.5)S(0.5)PAPPEGPSHPR;VAS(0.732)S(0.268)PAPPEGPSHPR 194.59 3.4989000000000004e-11 2086440000.0 1689700.0 1598250.0 1584600.0 1476460.0 1440590.0 1515730.0 1411880.0 1462700.0 1895170.0 1407230.0 True False 1595968.9726665602 1521467.6709778425 1686745.851449645 1616782.314486116 1553956.2371641302 1506269.7668385042 1554606.6090209302 1457626.2350967466 1551054.901347891 1394763.0370083726 1.1442581501799434 1.0908431257550664 1.2093422371355254 1.1591806432969092 1.1141363772424104 1.0799467198882058 1.1146026728349543 1.0450708804437556 1.1120562132724343 1.0 20.411588605807438 -7.7051105763327925 0.34822621047306246 0.9941253374472935 1.1581561307966821 0.5720015467274888 0.03642304109996719 1.0279469684787288 0.3941509716685909 0.06298969072358987 0.044763928388388184 1.971920598697668e-08 7.7051105763327925 0.16403079334938864 VASEAPLEHKPQVEAS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 4 VASEAPLEHKPQVEASSPR 19 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 VASEAPLEHKPQVEAS(0.5)S(0.5)PR;VASEAPLEHKPQVEAS(0.656)S(0.344)PR;VASEAPLEHKPQVEAS(0.648)S(0.352)PR;VASEAPLEHKPQVEAS(0.628)S(0.372)PR 264.63 2.4039999999999997e-35 9270800000.0 3634920.0 3843260.0 3337340.0 4610080.0 3572620.0 3507270.0 3482950.0 3514020.0 4167490.0 3323060.0 True False 3433283.7415666217 3658624.020749134 3552470.276332796 5048220.617128901 3853764.868572822 3485379.8269742546 3835040.5763162896 3501830.6847984353 3410778.8698735847 3293620.273701561 1.0424042410050198 1.1108214416707365 1.0785913314592044 1.5327269683871052 1.1700695733943056 1.0582215122987395 1.1643845548734886 1.0632162768608644 1.0355713732719873 1.0 21.651242803554666 -7.2796957943968845 1.079219812130671 1.006713300248071 1.1823038006937148 0.18657414311277853 0.13097643628130332 0.9605661119783502 1.9771287500074333 0.12322322484901822 0.04825639868162713 5.251751952858344e-08 7.2796957943968845 0.17559050044564373 VASEAPLEHKPQVEASS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 VASEAPLEHKPQVEASSPR 19 1 Q8TD19 Q8TD19 NEK9 Serine/threonine-protein kinase Nek9 1 VASEAPLEHKPQVEAS(0.094)S(0.906)PR;VASEAPLEHKPQVEAS(0.478)S(0.522)PR;VASEAPLEHKPQVEAS(0.032)S(0.968)PR;VASEAPLEHKPQVEAS(0.235)S(0.765)PR;VASEAPLEHKPQVEAS(0.173)S(0.827)PR 282.35 1.0109e-43 9237730000.0 3472250.0 3597010.0 3250450.0 4391850.0 3367100.0 3403880.0 3153750.0 3214250.0 4147480.0 3452150.0 True False 3279637.3707412295 3424204.240377916 3459979.2079038867 4809250.103542152 3632071.613821661 3382635.122314825 3472561.827633903 3203100.5169615927 3394402.1814625305 3421566.636732058 0.9585192161780063 1.000770876012626 1.0112266032639705 1.405569615950976 1.0615229803884974 0.9886217284213361 1.014904047273079 0.9361502659556201 0.9920608136115471 1.0 21.706225614180905 -6.19498328183388 4.91711600729224 0.9839955484401366 1.0978051262711495 0.15971521896355045 0.1163011872136054 0.42891235504138736 20.506879690652898 0.04217648138931271 0.04181247021585708 6.382880566164228e-07 6.19498328183388 0.11380957783101286 VASGPS(ph)PGEGISPQSAQAPQAPGDNHVVPVLR ddPTM_KYSE-520_SHP099_60min_R1 1 VASGPSPGEGISPQSAQAPQAPGDNHVVPVLR 32 0 Q14764 Q14764 MVP Major vault protein 1 VAS(0.043)GPS(0.939)PGEGIS(0.018)PQSAQAPQAPGDNHVVPVLR 168.89 2.5686e-10 922880000.0 75975.0 68583.0 44839.0 49891.0 56366.0 56135.0 53086.0 70300.0 64158.0 85785.0 True False 71760.51529759233 65288.16973481825 47729.3936849366 54632.62563972392 60801.68352133047 55784.64064277902 58452.45094943269 70056.14570814342 52508.52449156433 85025.0116397201 0.8439930076301082 0.7678701652105199 0.5613570967468052 0.6425476996253872 0.7151035012963937 0.6560968304145316 0.6874736012635388 0.8239474991781847 0.6175656254427909 1.0 16.37559967798407 -10.380686302653942 3.3221955326168318 1.0026202051196458 0.7000665137571398 0.5252295978249195 0.08504810896981707 65602888.41080742 92207449.90704638 1663737.2075967381 0.022404759254305177 4.162111374215405e-11 10.380686302653942 -0.302553691362506 VASGPSPGEGIS(ph)PQSAQAPQAPGDNHVVPVLR ddPTM_KYSE-520_SHP099_60min_R1 7 VASGPSPGEGISPQSAQAPQAPGDNHVVPVLR 32 0 Q14764 Q14764 MVP Major vault protein 1 VASGPSPGEGIS(0.933)PQS(0.067)AQAPQAPGDNHVVPVLR;VASGPSPGEGIS(0.983)PQS(0.017)AQAPQAPGDNHVVPVLR;VASGPSPGEGIS(1)PQSAQAPQAPGDNHVVPVLR;VASGPSPGEGIS(1)PQSAQAPQAPGDNHVVPVLR;VASGPSPGEGIS(0.958)PQS(0.042)AQAPQAPGDNHVVPVLR;VASGPSPGEGIS(0.996)PQS(0.004)AQAPQAPGDNHVVPVLR;VASGPSPGEGIS(0.997)PQS(0.003)AQAPQAPGDNHVVPVLR 323.74 8.533399999999999e-68 14950660000.0 1063419.0 1419738.0 1079558.0 864521.0 1054912.0 1402053.0 940247.0 1344024.0 1643638.0 1294684.0 True False 1004429.0281967807 1351531.6554098162 1149148.0360338714 946684.8159122845 1137927.572771773 1393302.2671618462 1035296.3426864198 1339361.8944415583 1345194.7719421713 1283214.1070089105 0.7827446898460617 1.0532393994328424 0.8955232254362145 0.7377450191215135 0.8867791949577369 1.085790952228186 0.8067993774629153 1.0437555877276978 1.0483011093742833 1.0 20.291330476578715 -7.073880272406546 0.9621701817863104 1.0354036273463403 0.8867624552316606 0.21657250011783036 0.10768243924266653 0.9639988519167767 1.6284526272163897 0.09334201890542135 0.04233536557924943 8.435672828467384e-08 7.073880272406546 -0.14864117211467964 VASPMNKS(ph)PSAMQQQDGLDR ddPTM_KYSE-520_SHP099_60min_R1 1 VASPMNKSPSAMQQQDGLDR 20 1 O60343-2;A0A3B3IRT3;O60343-3;O60343;Q5JU47 O60343-2 TBC1D4 TBC1 domain family member 4 1 VASPMNKS(0.994)PS(0.006)AMQQQDGLDR 188.49 4.2306e-13 1898600000.0 701910.0 692170.0 659730.0 486620.0 552370.0 747340.0 505970.0 564250.0 926750.0 676990.0 True False 662973.6530771042 658917.1142316482 702257.251405322 532868.2184923623 595838.3764446175 742675.5738483034 557118.3853913354 562292.74844694 758475.5614663363 670992.3952902498 0.9880494290703892 0.9820038481160754 1.0465949485188248 0.7941494154518108 0.8879957218991683 1.1068315811940697 0.8302901631997539 0.8380016709484616 1.130378774469186 1.0 19.355936890133187 -9.95753514660326 13.827859171558869 1.0000076375415572 0.9499633531744551 0.011234068339461722 0.11133159218005247 0.0 0.0 0.10664734637914246 0.025865780812531623 1.1027189893467098e-10 9.95753514660326 -0.050044284367102065 VASPSQGQVGSS(ph)SPKR ddPTM_KYSE-520_SHP099_60min_R1 1 VASPSQGQVGSSSPKR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 VASPSQGQVGS(0.001)S(0.649)S(0.35)PKR 395.68 2.2983e-86 832490000.0 460090.0 474300.0 363710.0 352990.0 334230.0 409930.0 370520.0 401770.0 529380.0 361770.0 True False 434567.89053332375 451513.9160611856 387155.32855657587 386538.0634696865 360531.9994914354 407371.4748141875 407975.77752672683 400376.35364382336 433257.9365838135 358564.99925280095 1.2119640551612738 1.259224734712192 1.0797354157917063 1.0780139285071813 1.005485756397678 1.136116117476866 1.137801454065207 1.1166074616266266 1.208310731629306 1.0 18.45187514315385 -4.76265344137937 24.999971597610788 1.0985798957412714 1.2355944243108745 0.46888536765853983 0.059659479217798225 26.706857647556497 550004.231203035 0.015757965314890383 0.036018809415336646 1.7272156269728684e-05 4.76265344137937 0.13701452856960317 VASPSQGQVGSSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 VASPSQGQVGSSSPK 15 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 VASPSQGQVGSS(0.04)S(0.96)PK;VASPSQGQVGS(0.036)S(0.003)S(0.961)PK;VASPSQGQVGSS(0.001)S(0.999)PK;VASPSQGQVGSS(0.007)S(0.993)PK;VASPSQGQVGS(0.001)S(0.179)S(0.819)PK 297.17 2.3298e-33 2290810000.0 2863260.0 3304750.0 2205300.0 2246550.0 2459400.0 3159500.0 2504690.0 3245260.0 3548010.0 3022090.0 True False 2704429.2600326957 3145984.849469118 2347457.166604759 2460061.436550115 2652940.7879281836 3139780.3885429823 2757888.508618742 3234002.9505093764 2903780.8220536024 2995316.633750445 0.9028859351829097 1.0503012649884764 0.7837091879216458 0.8213026325266536 0.8856962759915061 1.0482298776579269 0.9207335470125513 1.0796865059504814 0.9694403554317292 1.0 21.51427708712832 -6.247604858929559 24.196620524532165 1.003418180556241 0.8881665968549669 0.36352977474585957 0.07597395981459 618.0915676663171 1081044.114962893 0.026083667213237845 0.025939330879792763 5.65451214328195e-07 6.247604858929559 -0.11525158370127409 VASPSQGQVGSSS(ph)PKR ddPTM_KYSE-520_SHP099_60min_R1 4 VASPSQGQVGSSSPKR 16 1 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 VASPSQGQVGS(0.005)S(0.033)S(0.962)PKR;VASPSQGQVGS(0.004)S(0.175)S(0.821)PKR;VASPSQGQVGS(0.002)S(0.077)S(0.921)PKR;VASPSQGQVGS(0.01)S(0.119)S(0.872)PKR 177.6 1.0664e-08 6518000000.0 1068810.0 1088110.0 874340.0 856060.0 912780.0 1019740.0 862840.0 977310.0 1310930.0 897020.0 True False 1009520.9786800871 1035835.5623135909 930701.3553934622 937419.685016177 984610.59299223 1013375.4244066527 950064.2877068996 973919.9397158682 1072898.157856017 889073.100671 1.1354757869945484 1.1650735597914577 1.0468220832359507 1.0543786380542712 1.10745740957535 1.1398111399859465 1.0686008686910766 1.0954329165743883 1.206760340680964 1.0 19.76194251850852 -11.458875189848527 2.0897843403684977 2.381696808642151e-05 1.1099122020359655 0.33281922977026324 0.047912874040665306 1016380.0191029728 125207.57243437873 4818695.024446663 0.0123317957645515 3.4763605282149916e-12 11.458875189848527 1.1098883850678791 VASPT(ph)SGVK ddPTM_KYSE-520_SHP099_60min_R1 2 VASPTSGVK 9 0 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 VAS(0.34)PT(0.656)S(0.004)GVK;VAS(0.329)PT(0.561)S(0.11)GVK 144.77 0.00085264 1688010000.0 4286900.0 4547700.0 3230970.0 2836410.0 3109610.0 4199500.0 3232420.0 4156200.0 4528500.0 4316800.0 True False 4049097.111276718 4329221.665763138 3439243.4959347798 3105981.5536022354 3354318.615739356 4173289.362774571 3559184.5589791085 4141783.1122643696 3706238.554195096 4278556.510419584 0.9463699033578118 1.011841646877906 0.8038326682279825 0.7259414585358934 0.7839837121633363 0.97539657419771 0.8318657356310274 0.9680328171844571 0.8662357374898005 1.0 22.028692714895257 -8.238032848511462 0.6988143442973997 0.9977141194824408 0.8661539093346539 0.1446741251425555 0.08919307724045615 2.207421975806464 2.253098518182156 0.10011525961458097 0.03752833909776127 5.78052323901746e-09 8.238032848511462 -0.13156021014778696 VASPT(ph)SGVKR ddPTM_KYSE-520_SHP099_60min_R1 1 VASPTSGVKR 10 1 Q9Y4H2 Q9Y4H2 IRS2 Insulin receptor substrate 2 1 VAS(0.106)PT(0.447)S(0.447)GVKR 62.799 0.039176 318240000.0 960290.0 971470.0 840500.0 695480.0 674630.0 772390.0 520800.0 657240.0 1098400.0 759690.0 True False 907020.799409344 924799.1229938024 894679.9748475475 761578.2100963135 727719.5428803735 767569.2275064777 573447.5465181881 654960.1878409691 898958.2484107096 752959.7376298759 1.204607303790788 1.2282185577476332 1.188217550202313 1.011446126579844 0.9664786927001542 1.0194027504346896 0.7615912483225914 0.869847556394736 1.1938994922097688 1.0 19.522213197402163 -5.314592144274772 2.32135111427118 0.953777798743505 1.2199956432454662 0.5122553994654135 0.10421950518247639 0.24361567071550672 2.567469228478297 0.03248059241671513 0.058071318412885535 4.8462727832969856e-06 5.314592144274772 0.2662178445019612 VASS(ph)PAPPEGPSHPR ddPTM_KYSE-520_SHP099_60min_R1 1 VASSPAPPEGPSHPR 15 0 O14578-4;H7BYJ3;O14578;O14578-3 O14578-4 CIT Citron Rho-interacting kinase 1 VAS(0.071)S(0.929)PAPPEGPSHPR 188.4 5.1473e-11 647180000.0 1004500.0 885640.0 902420.0 799760.0 880240.0 897800.0 889580.0 846750.0 1123100.0 752750.0 True False 948778.3825788941 843092.5250272589 960591.4371230507 875768.9499433882 949509.8801195035 892196.4971780005 979507.4278641513 843812.8218829347 919173.3510470381 746081.2206306378 1.2716824339539374 1.1300278062415519 1.2875159038463593 1.1738252159773297 1.272662886913189 1.1958436595198794 1.312869699409142 1.1309932465123402 1.232001725321663 1.0 19.508973169559027 -9.059891654361367 0.7934486502905513 0.9936413784994829 1.2263742156142048 0.5471667012016088 0.06100905051089431 4.637534072987311 2.841771196869084 0.14929587603528316 0.019053171046974827 8.711809007490129e-10 9.059891654361367 0.23273283711472192 VASS(ph)PVMVSNPATR ddPTM_KYSE-520_SHP099_60min_R1 2 VASSPVMVSNPATR 14 0 P51610-2;P51610;A6NEM2;P51610-4 P51610-2 HCFC1 Host cell factor 1;HCF N-terminal chain 1;HCF N-terminal chain 2;HCF N-terminal chain 3;HCF N-terminal chain 4;HCF N-terminal chain 5;HCF N-terminal chain 6;HCF C-terminal chain 1;HCF C-terminal chain 2;HCF C-terminal chain 3;HCF C-terminal chain 4;HCF C-terminal chain 5;HCF C-terminal chain 6 1 VAS(0.03)S(0.97)PVMVSNPATR;VAS(0.016)S(0.984)PVMVSNPATR 155.34 1.0985e-06 3681800000.0 4463300.0 4831700.0 3623100.0 2756000.0 3750800.0 4608500.0 3534400.0 4695100.0 5074400.0 4451000.0 True False 4215711.8516320335 4599577.87947044 3856650.8231649636 3017929.411378389 4045966.6208672994 4579736.642063725 3891691.6444198987 4678813.793944579 4153016.8752142247 4411567.602825604 0.9556040462650679 1.0426175667181015 0.8742132435406369 0.6840945629951151 0.9171267415863381 1.0381200186370052 0.8821561845560917 1.0605785097677758 0.941392550021045 1.0 22.07285996228662 -6.013086690398736 24.832252531715245 0.9813735242764863 0.8867275455009715 0.18427116495627593 0.09567941428354819 1107.032876050401 2100619.083616529 0.03328688794664283 0.034831255936083334 9.70316261124336e-07 6.013086690398736 -0.09464597877551473 VATLNS(ph)EEESDPPTYK ddPTM_KYSE-520_SHP099_60min_R1 9 VATLNSEEESDPPTYK 16 0 Q00341;Q00341-2;A0A024R4E5;C9JES8;C9JIZ1;C9J5E5;C9JZI8;C9JMQ6;C9JQ82;C9JK79;C9JHS7;C9JT62;C9JHN6;C9JEJ8;C9JBS3;C9JHZ8 Q00341 HDLBP Vigilin 1 VATLNS(1)EEESDPPTYK;VAT(0.001)LNS(0.973)EEES(0.026)DPPTYK;VATLNS(1)EEESDPPTYK;VATLNS(1)EEESDPPTYK;VATLNS(1)EEESDPPTYK;VATLNS(1)EEESDPPTYK;VATLNS(1)EEESDPPTYK;VATLNS(1)EEESDPPTYK;VATLNS(0.999)EEES(0.001)DPPTYK 407.45 4.332299999999999e-101 13120970000.0 18026570.0 18495720.0 14394520.0 12427570.0 13030920.0 17337320.0 14126220.0 16522360.0 19543080.0 17312070.0 True False 17026600.2270236 17607157.84855829 15322413.79124634 13608682.516314838 14056379.268207356 17229111.354927685 15554236.17622151 16465047.789507825 15994549.312955534 17158698.528386656 0.9923013799010154 1.0261359752564987 0.8929822833531086 0.7931069185580237 0.8191984517329827 1.0041036228024254 0.9064927710274303 0.9595743967567655 0.9321539909623564 1.0 24.032436794097435 -10.340426112790933 11.967335589016258 1.0000000009851966 0.9229336408982495 0.08737958602264506 0.07229251978215025 2.0511212984703005e-09 9.579890971989973e-11 0.07693747538385422 0.01866007840288375 4.5663993246996007e-11 10.340426112790933 -0.07706636008694712 VAVAT(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 3 VAVATPAK 8 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VAVAT(1)PAK;VAVAT(1)PAK;VAVAT(1)PAK 128.81 0.0039055 3671190000.0 8822600.0 11430100.0 7677840.0 6828480.0 7019790.0 9282400.0 7509600.0 10024700.0 10820100.0 10877900.0 True False 8333192.790582923 10880980.839070128 8172765.8513783505 7477456.686142626 7572207.535858499 9224465.098468542 8268743.654633232 9989926.655482573 8855442.592524314 10781530.268878132 0.7729137314243268 1.0092241609225983 0.7580339383704912 0.6935431705577997 0.7023314267100251 0.8555803182314295 0.7669359959505668 0.9265778054085148 0.8213530335379529 1.0 23.36205862473603 -8.184946134282137 0.803446080150498 0.996780868603073 0.7965105629821773 0.29703928474570174 0.09123395028144687 1.1894742164212908 1.628783231578763 0.09427011058713045 0.033835202162485326 6.532115657144368e-09 8.184946134282137 -0.20027030562089576 VAVAT(ph)PAKK ddPTM_KYSE-520_SHP099_60min_R1 3 VAVATPAKK 9 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VAVAT(1)PAKK;VAVAT(1)PAKK;VAVAT(1)PAKK 93.345 0.0064303 16973560000.0 13506840.0 15583100.0 13304840.0 9783870.0 9520690.0 12089480.0 10290820.0 12411240.0 15102900.0 14338200.0 True False 12757588.659982003 14834464.485290049 14162491.27489666 10713726.06317222 10269914.137683997 12014025.0709551 11331116.514324686 12368188.305245202 12360594.073126435 14211174.7029508 0.8977152787610883 1.0438591316599486 0.9965742854428473 0.7538944729845329 0.7226646883421649 0.8453928209369289 0.7973384854646745 0.8703142818078986 0.8697798972635168 1.0 23.76052247762937 -5.247344468836756 24.672762564427334 0.8255776761187545 0.9858305438762828 0.3988275131169384 0.0790854317385681 600.3527393608845 1050899.1432429473 0.02122345480153669 0.036519356715614106 5.657903437642627e-06 5.247344468836756 0.16025286775752823 VAVEEVDEEGKFVR ddPTM_KYSE-520_SHP099_60min_R1 4 VAVEEVDEEGKFVR 14 1 P02545-3;P02545;P02545-2;P02545-6;P02545-5;P02545-4;Q5TCI8;A0A0C4DGC5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ;;; 198.23 5.6056e-11 2743530000.0 2311030.0 1823460.0 1243010.0 1408860.0 1998630.0 1834560.0 1466570.0 1555350.0 1737900.0 1527530.0 False True 2182832.5589759126 1735858.2445307379 1323136.41348632 1542757.630810794 2155910.81035086 1823109.8305445218 1614825.2079438916 1549954.8538714175 1422341.1688938176 1513997.2726003577 1.4417678277760704 1.14653987556353 0.8739357972645316 1.018996307807767 1.4239859274303628 1.204169824832808 1.0665971710572222 1.0237500964643755 0.9394608528262957 1.0 20.52993117569836 -7.050468313510777 2.712716477994447 0.9846806878725651 1.1712650037449248 0.23527529699377192 0.15963153281523876 0.5078424136948775 7.357330055316424 0.09366653943719863 0.050816656272719925 8.902903919734596e-08 7.050468313510777 0.18658431587235969 VAYEGS(ph)DSEKGEGAEPLKVPVWEPQDWQQQLVNIR ddPTM_KYSE-520_SHP099_60min_R1 2 VAYEGSDSEKGEGAEPLKVPVWEPQDWQQQLVNIR 35 2 H3BRL9;A0A494C106;H3BPD5;P78549-3;P78549-2;P78549 H3BRL9 NTHL1 Endonuclease III-like protein 1 1 VAYEGS(0.991)DS(0.009)EKGEGAEPLKVPVWEPQDWQQQLVNIR;VAY(0.001)EGS(0.953)DS(0.046)EKGEGAEPLKVPVWEPQDWQQQLVNIR 99.63600000000001 0.00060077 485250000.0 97217.0 81708.0 90746.0 70839.0 84947.0 82093.0 80173.0 94223.0 104026.0 82668.0 True False 91824.17921271526 77782.62503379161 96595.63235873368 77571.51726147797 91631.84561768538 81580.62713614776 88277.66925307736 93896.1624048135 85137.50068205778 81935.62583473074 1.12068685968092 0.9493138575725779 1.1789210294624841 0.9467373498549282 1.11833948522603 0.9956673462249614 1.0774027580034466 1.1459747997068808 1.0390779323976291 1.0 16.32220325558727 VCAKPWAPDMTLPGIS(ph)PPPEK ddPTM_KYSE-520_SHP099_60min_R1 3 VCAKPWAPDMTLPGISPPPEK 21 1 Q96FF9;B5MBX0 Q96FF9 CDCA5 Sororin 1 VCAKPWAPDMTLPGIS(1)PPPEK;VCAKPWAPDMTLPGIS(1)PPPEK;VCAKPWAPDMTLPGIS(1)PPPEK 127.66 2.8153000000000003e-05 5419700000.0 2214332.0 2160361.0 1665748.0 1497008.0 1738048.0 2141845.0 1814447.0 2083913.0 2406711.0 1992315.0 True False 2091498.5897985974 2056574.0147920267 1773124.7813710338 1639283.190228131 1874822.4894596247 2128476.950877937 1997869.0100562344 2076684.3921919514 1969712.9506471076 1974664.639097613 1.0591664773793565 1.041480145070023 0.897937171843681 0.8301577684488514 0.9494384273353806 1.0778928779778087 1.011751043949025 1.0516643439470104 0.9974923901747852 1.0 20.913176227883397 -6.235612063204231 22.82172037530953 1.0299885774615947 0.9502285783940569 0.23235716946779317 0.0651144510105697 402.4132157763628 355582.52932841296 0.023936337533258013 0.023922554536150373 5.812834214506629e-07 6.235612063204231 -0.07975999906753772 VCAYGAQGEGPY(ph)SSLVSCR ddPTM_KYSE-520_SHP099_60min_R1 1 VCAYGAQGEGPYSSLVSCR 19 0 P16144-4;P16144-2;P16144-3;P16144 P16144-4 ITGB4 Integrin beta-4 1 VCAYGAQGEGPY(0.928)S(0.069)S(0.003)LVSCR 199.38 1.4445e-14 294470000.0 437150.0 512880.0 434700.0 400320.0 421960.0 459110.0 407500.0 473840.0 630450.0 400710.0 True False 412900.4180630794 488240.47495142487 462721.45754459203 438366.2924394033 455165.8513760169 456244.5241917927 448694.0768167464 472196.35963508696 515976.17235117534 397160.0211476626 1.0396323800918639 1.2293293608469693 1.1650756191609577 1.1037523141746948 1.14605153373881 1.1487674989879273 1.129756402772281 1.1889322552420907 1.2991644296426739 1.0 18.599360880296903 -7.266626102986196 23.91904119528827 1.1830362614139005 1.1415412173448012 0.0 0.08204161775678491 840.5718676884941 3876306.1075412603 0.04062401198518665 0.02047384185322896 5.4122007485841984e-08 7.266626102986196 -0.04149504406909932 VCEALEHGHVEWSSR ddPTM_KYSE-520_SHP099_60min_R1 1 VCEALEHGHVEWSSR 15 0 A0A0A0MTR2;Q8N543;Q8N543-2 A0A0A0MTR2 OGFOD1 Prolyl 3-hydroxylase OGFOD1 0 110.57 0.00022546 387640000.0 139620.0 203390.0 141060.0 148140.0 184890.0 164580.0 138710.0 155230.0 166610.0 182770.0 False True 131875.00027443047 193618.83910538573 150152.95330397983 162219.18106008487 199439.79111980242 163552.7951721488 152732.1604791434 154691.5433609544 136357.82389631128 181150.79999290852 0.7279846419645564 1.0688268509604446 0.8288837438744838 0.8954924906013952 1.100960035106717 0.9028543908089358 0.8431216449782303 0.8539379531694593 0.7527310058892881 1.0 17.466831651430073 -9.48301747823319 5.35017881745606 0.9999999954432603 0.8946604527276795 0.07838788953905396 0.11381002815874572 143440794.08775645 511561811.1496227 2.8909200684613707 0.02817450422612548 3.2883839646921267e-10 9.48301747823319 -0.10533954271558088 VCEEIAIIPSKK ddPTM_KYSE-520_SHP099_60min_R1 1 VCEEIAIIPSKK 12 1 H3BNC9;H0YN88;A0A075B716;P08708;H0YN73 H3BNC9 RPS17 40S ribosomal protein S17 0 88.087 0.061889 0.0 455800.0 489880.0 365860.0 333720.0 468990.0 462790.0 327600.0 407260.0 461950.0 372600.0 False True 430515.86538522615 466345.4294751285 389443.9209966974 365436.6484634236 505896.8448119214 459901.55594676547 360717.00506789226 405847.3101151985 378071.52481184114 369299.0538784138 1.1657648750082286 1.2627853350219136 1.0545489269650714 0.9895412528831936 1.369883945000521 1.2453364045123743 0.9767612488567408 1.098966558004824 1.0237543823665347 1.0 18.494430040888627 -6.763792772148651 24.999342621357005 1.0331177551155288 1.179106441558873 0.35086784837553586 0.10397536801759742 84.07225545889091 893052.4765313965 0.045032936586139716 0.03199535262333269 1.7226903774342932e-07 6.763792772148651 0.14598868644334417 VCNPIITK ddPTM_KYSE-520_SHP099_60min_R1 2 VCNPIITK 8 0 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PS65 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ; 130.27 0.0060838 624200000.0 837040.0 1166760.0 881670.0 681030.0 1184540.0 1239860.0 960150.0 1142380.0 1075660.0 1225500.0 False True 790607.7226021287 1110707.0982575354 938503.8589218783 745754.8864408634 1277756.5588893443 1232121.5738372856 1057211.3321609807 1138417.350413496 880347.2591819585 1214643.0234245737 0.6508971832506668 0.9144308877895658 0.7726581726669399 0.6139704193403889 1.0519605631017646 1.0143898660558168 0.8703885106755654 0.9372443824720068 0.7247785910792958 1.0 20.21210094570119 -5.764978262843735 24.999981558368756 0.930915413253554 0.7530685098574289 0.4125476453461374 0.11348897558634381 103.69398317313433 732533.2690765518 0.03540031235038644 0.04174613699767997 1.7179943734621743e-06 5.764978262843735 -0.17784690339612508 VDALHCPPAAVVTVTPS(ph)PEGVFSSLQAK ddPTM_KYSE-520_SHP099_60min_R1 2 VDALHCPPAAVVTVTPSPEGVFSSLQAK 28 0 Q6UB99 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 VDALHCPPAAVVTVT(0.003)PS(0.994)PEGVFS(0.001)S(0.001)LQAK;VDALHCPPAAVVTVT(0.002)PS(0.997)PEGVFSSLQAK 150.91 5.9104e-07 231440000.0 153108.0 214052.0 142270.0 161989.0 166078.0 200609.0 138893.0 197436.0 243020.0 247552.0 True False 144614.7940267688 203768.62062139786 151440.95184004836 177384.38585623118 179147.3937454407 199356.92481886977 152933.65990505135 196751.14059790902 198893.6940356611 245358.8818725417 0.5894010965614559 0.830492130817791 0.6172222121501126 0.7229588939371605 0.7301443191223199 0.8125115475641559 0.6233059864712657 0.8018912504668028 0.8106235752206508 1.0 17.904533971649105 -8.181099741605296 0.9970272657441217 1.0001333713389682 0.709059947242536 0.5697467226363753 0.07752962979234518 0.5456201761317591 1.1223691347754683 0.06959178684682633 0.022913708500763512 6.590225244211892e-09 8.181099741605296 -0.2910734240964322 VDALHCPPAAVVTVTPSPEGVFSSLQAKPS(ph)PSPR ddPTM_KYSE-520_SHP099_60min_R1 1 VDALHCPPAAVVTVTPSPEGVFSSLQAKPSPSPR 34 1 Q6UB99 Q6UB99 ANKRD11 Ankyrin repeat domain-containing protein 11 1 VDALHCPPAAVVTVTPS(0.014)PEGVFS(0.088)S(0.088)LQAKPS(0.405)PS(0.405)PR 131.56 1.7819e-05 334280000.0 189390.0 233150.0 170900.0 140530.0 155990.0 148010.0 127400.0 168850.0 231740.0 100280.0 True False 178884.15916039486 221949.12403471523 181916.48744966806 153885.92894811477 168265.52553830913 147086.21468847824 140278.83530418048 168264.29875988635 189661.85769000163 99391.59721665952 1.7997915736322547 2.233077345068696 1.8303004735210768 1.5482790623906102 1.6929552421973284 1.479865690938151 1.4113751990361179 1.6929428993186835 1.9082282909345527 1.0 16.600836267893566 -5.090512897473514 3.5978657129025233 1.5621058106767296 2.021674809863616 0.3920160205633476 0.24448006331215938 0.23677843218037445 5.70616731178101 0.06509165615146977 0.12537843362107393 8.118711380099792e-06 5.090512897473514 0.45956899918688654 VDASWDPKS(ph)PFK ddPTM_KYSE-520_SHP099_60min_R1 1 VDASWDPKSPFK 12 1 A6NJI9 A6NJI9 LRRC72 Leucine-rich repeat-containing protein 72 1 VDAS(0.015)WDPKS(0.985)PFK 48.111999999999995 0.058361 413740000.0 368300.0 318340.0 312850.0 192770.0 343200.0 292930.0 286320.0 304310.0 375230.0 280450.0 True False 347869.6648121524 303046.4685619184 333016.8115776988 211090.80284158586 370207.88745911693 291101.715213134 315264.0198139161 303254.41963648755 307097.69077854155 277965.4311867982 1.2514853495518914 1.090230778942671 1.1980511754855767 0.7594138664664698 1.3318486614629788 1.0472586967748085 1.1341842705687115 1.0909788974179837 1.1048053330493672 1.0 18.084545949628772 -4.879255685403954 0.012292717754955726 7.960942875144226e-07 2.2490607241050906 0.06267766775858685 0.142439737144246 12484.048703060162 29.585300643115165 2515.1217932011928 2905.2683134663425 1.3205179669740972e-05 4.879255685403954 2.2490599280108032 VDCDQHSDIAQR ddPTM_KYSE-520_SHP099_60min_R1 1 VDCDQHSDIAQR 12 0 Q9BS26 Q9BS26 ERP44 Endoplasmic reticulum resident protein 44 0 135.58 7.428e-05 48028000.0 118520.0 119080.0 81143.0 88067.0 99224.0 105100.0 98841.0 99904.0 118960.0 103740.0 False True 111945.45933623744 113359.21805727594 86373.6076133904 96436.86120169106 107032.3642926673 104444.0319151346 108832.81287520005 99557.45634176886 97359.86273756191 102820.94430849877 1.0887417936987813 1.1024915090952545 0.8400390425732659 0.9379106742333232 1.0409587755927703 1.0157855738201158 1.0584692992962947 0.9682604746661506 0.9468874594795423 1.0 16.649774641423065 VDDDS(ph)LGEFPVTNSR ddPTM_KYSE-520_SHP099_60min_R1 7 VDDDSLGEFPVTNSR 15 0 J3KMZ8;Q92785;Q92785-2 J3KMZ8 DPF2 Zinc finger protein ubi-d4 1 VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR;VDDDS(1)LGEFPVTNSR 313.87 8.0046e-43 4966360000.0 4332060.0 3594360.0 3400920.0 3481120.0 3325870.0 3397530.0 3077250.0 3761220.0 4400720.0 3162630.0 True False 4091751.9960524873 3421681.5503556444 3620148.7448643977 3811964.598163103 3587597.047388268 3376324.7550202366 3388328.461065846 3748173.2056953437 3601660.181123426 3134611.558688909 1.3053457882876929 1.091580722616491 1.1548954877134987 1.216088349957309 1.1445108844327831 1.0771110524560266 1.0809404602856303 1.1957376968465798 1.1489972884008206 1.0 21.579855244544692 -13.999999999999998 0.07120611999059108 0.5440704995809076 1.3175814921453615 0.40273708153327037 0.06274814085970676 357.6974239135466 1.8265680012404273 27.481335854649277 3.299421718377615 1.0000000000000041e-14 13.999999999999998 0.7735109925644539 VDDFLANEAK ddPTM_KYSE-520_SHP099_60min_R1 3 VDDFLANEAK 10 0 P52209-2;P52209;K7EMN2;K7EM49;K7EPF6 P52209-2 PGD 6-phosphogluconate dehydrogenase, decarboxylating 0 ;; 152.54 0.00057977 321770000.0 743840.0 947050.0 695920.0 521670.0 802700.0 913010.0 609270.0 759990.0 815730.0 818980.0 False True 702577.7123917226 901552.2964489694 740780.1167113687 571249.3599541954 865867.9232617519 907311.5659261359 670860.9575021822 757353.7720730002 667613.9948798864 811724.4743567989 0.8655371799013909 1.1106629465168572 0.9126004452414155 0.7037478578021771 1.0667017573270237 1.1177580504087659 0.8264638786871181 0.9330182789832949 0.8224637989496325 1.0 19.630630587397057 VDDHLMGK ddPTM_KYSE-520_SHP099_60min_R1 1 VDDHLMGK 8 0 O95232;H0YA81;J3KPP4 O95232 LUC7L3 Luc7-like protein 3 0 93.429 0.0040955 0.0 464510.0 440810.0 300160.0 290190.0 410080.0 463610.0 313650.0 387570.0 363780.0 368590.0 False True 438742.7043222721 419632.8259307 319508.7938729803 317769.57035119523 442350.9629639715 460716.4380226018 345356.80292901257 386225.61012951843 297726.7221475304 365324.5793586807 1.2009668363745887 1.1486575216684194 0.874588822996446 0.8698280605948626 1.2108436934095945 1.261115358926518 0.9453423679711858 1.0572122215470119 0.8149649352096241 1.0 18.478819297192157 -7.376667709864184 2.0756891561119373 0.9225874086450252 1.0770385153823667 0.16332598353244232 0.13979808258781834 0.7022745705329663 5.5726908734783756 0.11660312840367243 0.04307268932840321 4.200802755335271e-08 7.376667709864184 0.15445110673734153 VDDKPS(ph)SPGDSSK ddPTM_KYSE-520_SHP099_60min_R1 3 VDDKPSSPGDSSK 13 1 C9JM54;C9J6K3;Q9HC52 C9JM54 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.5)S(0.5)PGDSSK;VDDKPS(0.79)S(0.21)PGDSSK;VDDKPS(0.5)S(0.5)PGDSSK 210.02 4.6999e-12 3723230000.0 5218120.0 4864190.0 4389840.0 4256900.0 4637150.0 4323440.0 4476690.0 4596390.0 5343600.0 4456090.0 True False 4928660.48153567 4630507.0111019565 4672816.110392343 4661474.496116344 5002067.323225662 4296455.807261365 4929237.513484075 4580446.195895489 4373336.941193978 4416612.509385562 1.1159368115409665 1.0484295376290893 1.0580090738008676 1.0554411296464057 1.1325574323298624 0.9727943753569377 1.1160674618860393 1.037094874445465 0.9902016379975331 1.0 22.074508832693784 -7.57414705337285 4.559818273644317 0.9973532204256446 1.0684917712547575 0.33088559469419043 0.04309611870517351 0.24076462537142004 10.613783181181997 0.029366849303750914 0.010515863717089256 2.6659558112955725e-08 7.57414705337285 0.07113855082911291 VDDKPS(ph)SPGDSSKK ddPTM_KYSE-520_SHP099_60min_R1 1 VDDKPSSPGDSSKK 14 2 C9JM54;C9J6K3;Q9HC52 C9JM54 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.499)S(0.499)PGDS(0.001)S(0.001)KK 59.512 0.029814999999999998 396440000.0 457120.0 480570.0 423270.0 341040.0 452810.0 440550.0 366000.0 374110.0 525880.0 393160.0 True False 431762.64235387143 457482.6958497236 450554.66145594494 373452.3390625854 488443.5708635279 437800.3640362751 402998.851815777 372812.2997279304 430393.448355994 389676.90827385115 1.1080016115567308 1.1740051466642742 1.156226227137152 0.9583640475820453 1.2534578274786223 1.123495785202146 1.0341871516096193 0.9567215603803012 1.104487946854497 1.0 18.57191891632133 -6.78073435082398 5.012695047238557 1.0185859789399965 1.1305776990453218 0.30922887997109516 0.07708758172269212 0.22932107437365412 15.119343724685741 0.031866460685084544 0.022186360343457577 1.65678307438189e-07 6.78073435082398 0.11199172010532532 VDDKPSS(ph)PGDSSK ddPTM_KYSE-520_SHP099_60min_R1 8 VDDKPSSPGDSSK 13 1 C9JM54;C9J6K3;Q9HC52 C9JM54 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.395)S(0.593)PGDS(0.008)S(0.005)K;VDDKPS(0.111)S(0.889)PGDSSK;VDDKPS(0.488)S(0.509)PGDS(0.002)SK;VDDKPS(0.098)S(0.752)PGDS(0.07)S(0.08)K;VDDKPS(0.025)S(0.974)PGDSSK;VDDKPS(0.107)S(0.861)PGDS(0.032)SK;VDDKPS(0.203)S(0.797)PGDSSK;VDDKPS(0.266)S(0.733)PGDS(0.001)SK 210.31 5.973600000000001e-11 12362910000.0 15377220.0 14602680.0 13470010.0 13408430.0 14144710.0 12459840.0 13540780.0 14580630.0 16663470.0 13549580.0 True False 14524214.952871906 13901145.33373047 14338308.397378037 14682763.155808518 15257818.20460913 12382073.516817028 14909614.187677708 14530053.197674634 13637803.899894733 13429541.26261373 1.0815123665694835 1.0351169159016347 1.0676692611455172 1.0933182949951992 1.1361384507663794 0.9220027158550285 1.1102102369784086 1.081947098083283 1.0155077997981048 1.0 23.678906689047214 VDDKPSS(ph)PGDSSKK ddPTM_KYSE-520_SHP099_60min_R1 4 VDDKPSSPGDSSKK 14 2 C9JM54;C9J6K3;Q9HC52 C9JM54 CBX8 Chromobox protein homolog 8 1 VDDKPS(0.016)S(0.983)PGDSS(0.001)KK;VDDKPS(0.329)S(0.671)PGDSSKK;VDDKPS(0.104)S(0.896)PGDSSKK;VDDKPS(0.168)S(0.832)PGDSSKK 153.04 1.3850999999999999e-06 3094760000.0 2857970.0 2697350.0 2694800.0 2309120.0 2667320.0 2216810.0 2316540.0 2496850.0 3221020.0 2474130.0 True False 2699432.706878055 2567765.2571951053 2868511.119832447 2528578.0705377576 2877222.9090252146 2202974.0665060803 2550718.470451696 2488189.010119171 2636163.9633064982 2452211.133044011 1.1008157782593375 1.0471224204938885 1.1697651483506923 1.031142072745975 1.1733177744175813 0.8983623134323901 1.040170822194011 1.0146716066126409 1.0750150865003782 1.0 21.22565176837011 -6.246261768880933 24.995834738234535 1.0087188605199662 1.1008066175069682 0.406730987041681 0.059517003642381154 871.9071032228893 1435934.250397451 0.01879866652747838 0.01872889570017078 5.672026237397714e-07 6.246261768880933 0.092087756987002 VDDKPSSPGDS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 VDDKPSSPGDSSK 13 1 C9JM54;C9J6K3;Q9HC52 C9JM54 CBX8 Chromobox protein homolog 8 1 VDDKPSS(0.023)PGDS(0.972)S(0.005)K 216.23 4.3622e-11 1933100000.0 1359400.0 1203300.0 1149700.0 1158400.0 1167900.0 1081400.0 1136700.0 1217900.0 1392000.0 1080700.0 True False 1283991.3721032855 1145491.6618098777 1223811.50158504 1268493.9877143411 1259807.0855579942 1074650.5814750362 1251608.729122936 1213675.389159996 1139247.8894644089 1071125.8387718766 1.1987306492162253 1.0694277183372467 1.1425468953192546 1.1842623357576374 1.1761522689084358 1.003290689642219 1.168498306938423 1.133083849934535 1.063598550447293 1.0 20.03069655109993 -6.200238577252283 24.999923053610914 1.0879362020242254 1.150533153191427 0.3031651597931031 0.05897238473468133 383.648180980429 156716.27296134832 0.01939760312731041 0.019397596479731608 6.306108267683218e-07 6.200238577252283 0.06259695116720154 VDDKWEK ddPTM_KYSE-520_SHP099_60min_R1 1 VDDKWEK 7 1 Q96QK1 Q96QK1 VPS35 Vacuolar protein sorting-associated protein 35 0 109.71 0.0033164 1111900000.0 1742300.0 1787800.0 1148100.0 1249800.0 1633500.0 1538400.0 1288000.0 1181400.0 1189600.0 1446900.0 False True 1645651.145811058 1701911.4044574902 1222108.363024951 1368580.6162339267 1762047.1566563777 1528798.2749594958 1418203.6096686365 1177301.999140834 973598.6273756187 1434081.5916711646 1.1475296491975377 1.1867605123319505 0.8521888643733325 0.9543254889975206 1.2286937974031367 1.0660469277608926 0.9889281181107519 0.8209449211107297 0.6789004426457105 1.0 20.45169567743004 -7.1345761127325025 2.993134918993448 0.8102461568964978 1.0679644231923462 0.41428879731027934 0.12620952235223465 0.2644911326282418 4.493739829716364 0.07171371098704529 0.03730850509462057 7.335401458089582e-08 7.1345761127325025 0.2577182662958484 VDDNEETIKKR ddPTM_KYSE-520_SHP099_60min_R1 1 VDDNEETIKKR 11 2 Q5T9B7;P00568 Q5T9B7 AK1 Adenylate kinase isoenzyme 1 0 48.004 0.059489 1639700000.0 907320.0 743770.0 533020.0 453620.0 993620.0 698790.0 461200.0 687580.0 682170.0 490440.0 False True 856989.1509024214 708038.1727784699 567379.3220621534 496731.9084141741 1071812.2410755479 694428.5924070103 507822.59687824256 685194.9454623786 558305.1241062754 486095.0831565466 1.7630072399362837 1.4565836958907208 1.1672188049666596 1.0218821905964475 2.204943596869034 1.428585921704067 1.0446980734316513 1.4095903645289742 1.148551267955273 1.0 18.890879015801442 -7.516541698720127 0.8723451395955246 1.0312529783234965 1.478469546147627 0.1946004862627867 0.3257903486426071 1.0965590268501357 1.6120701176918801 0.31994643201071316 0.1253159485657052 3.0440956975946234e-08 7.516541698720127 0.44721656782413044 VDDSPSTS(ph)GGSSDGDQR ddPTM_KYSE-520_SHP099_60min_R1 1 VDDSPSTSGGSSDGDQR 17 0 C9J180;Q96LR5;F8WF15;F8W8F0 C9J180 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDS(0.001)PS(0.142)T(0.142)S(0.465)GGS(0.043)S(0.208)DGDQR 140.77 7.9208e-06 326810000.0 572850.0 530900.0 548800.0 516700.0 523950.0 528910.0 562870.0 575440.0 632160.0 562240.0 True False 541072.8685518363 505394.76710285345 584176.5261110463 565807.0126484808 565181.8841322982 525608.8765007978 619770.3926818221 573443.9329487054 517375.6794567672 557258.9910161006 0.9709540398177324 0.9069297673983179 1.0483034558955513 1.0153394055011904 1.014217613791661 0.9432039410300186 1.1121765690163898 1.0290438417208725 0.9284294875411331 1.0 19.087988463068 -4.7602779341831 24.999887465903406 1.013790154610706 0.9389419003022228 0.24557870585126806 0.05061116706389789 39.41418600911229 848285.5636893719 0.012994983712054048 0.030642567420821654 1.7366890491698625e-05 4.7602779341831 -0.07484825430848319 VDDSPSTSGGS(ph)SDGDQR ddPTM_KYSE-520_SHP099_60min_R1 1 VDDSPSTSGGSSDGDQR 17 0 C9J180;Q96LR5;F8WF15;F8W8F0 C9J180 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDSPS(0.001)T(0.001)S(0.001)GGS(0.498)S(0.498)DGDQR 115.38 0.0001338 234410000.0 319980.0 290450.0 270750.0 288990.0 292950.0 256600.0 277300.0 280330.0 349240.0 271120.0 True False 302230.0715356841 276496.3460256616 288202.97821531666 316455.52271198825 316003.498342507 254998.46421906285 305332.19018719933 279357.60065951414 285826.8196239585 268718.08772816806 1.1247105622507123 1.0289457935759128 1.0725105282338094 1.1776487596626202 1.1759666087761547 0.9489441755666861 1.1362547001155712 1.0395935868005612 1.0636679578975623 1.0 18.03573390854362 -6.2418880031938695 24.989563796602496 1.0463268290998238 1.1121362046750563 0.2862145442187086 0.06089154862308516 1342.6002422346528 1716043.5270764774 0.020765652253816592 0.020735793437145714 5.729437639208791e-07 6.2418880031938695 0.06580937557523248 VDDSPSTSGGSS(ph)DGDQR ddPTM_KYSE-520_SHP099_60min_R1 1 VDDSPSTSGGSSDGDQR 17 0 C9J180;Q96LR5;F8WF15;F8W8F0 C9J180 UBE2E2 Ubiquitin-conjugating enzyme E2 E2 1 VDDSPSTSGGS(0.03)S(0.97)DGDQR 280.26 1.3115999999999998e-37 380180000.0 410540.0 363290.0 353620.0 353520.0 366140.0 341490.0 344410.0 367090.0 408590.0 373620.0 True False 387766.52780879935 345837.003090593 376414.9110120051 387118.4345103364 394953.1349483718 339358.6342407162 379226.32391768304 365816.65046945005 334400.355715706 370310.0174719614 1.0471402595479602 0.9339120919589451 1.0164858989819414 1.0453901224523252 1.0665472612505718 0.9164176452947597 1.0240779509735969 0.9878659318125209 0.9030281114148516 1.0 18.498374051658054 -6.258461630581627 24.999806096162875 0.9691320512211371 1.0180119430627694 0.2529133060723202 0.04743437277201019 459.9006927478726 3861121.484332572 0.0163445147869784 0.015698449331521976 5.514909238188008e-07 6.258461630581627 0.04887989184163233 VDDSTGTVIS(ph)DVEEDAGELSR ddPTM_KYSE-520_SHP099_60min_R1 5 VDDSTGTVISDVEEDAGELSR 21 0 S4R403;Q9Y2D8-2;Q9Y2D8-3;Q9Y2D8 S4R403 SSX2IP Afadin- and alpha-actinin-binding protein 1 VDDS(0.001)T(0.001)GT(0.004)VIS(0.991)DVEEDAGELS(0.002)R;VDDSTGT(0.001)VIS(0.999)DVEEDAGELSR;VDDSTGTVIS(1)DVEEDAGELSR;VDDSTGTVIS(1)DVEEDAGELSR;VDDSTGTVIS(1)DVEEDAGELSR 132.13 1.458e-05 1045521000.0 788440.0 790132.0 661345.0 590299.0 644847.0 735520.0 583894.0 667701.0 838735.0 782974.0 True False 744703.6614838268 752172.8727076884 703976.3568894138 646400.8394801348 695592.7902224638 730929.346852709 642919.7037762885 665384.9010735856 686441.8667887435 776037.4595045546 0.9596233433876604 0.9692481509692816 0.9071422368436354 0.8329505638720279 0.8963391930417262 0.9418737947512945 0.8284647807938905 0.8574133798881141 0.8845473351595533 1.0 19.56576676774755 -4.861994123314181 4.334643413515849 0.8844219996966762 0.9644543494401633 0.249340028120417 0.048418999270900376 0.2453118572799163 8.097964056827445 0.012424918656457755 0.028199751330205556 1.3740605680823286e-05 4.861994123314181 0.08003234974348705 VDEDS(ph)AEDTQSNDGKEVVEVGQK ddPTM_KYSE-520_SHP099_60min_R1 1 VDEDSAEDTQSNDGKEVVEVGQK 23 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 VDEDS(0.794)AEDT(0.195)QS(0.011)NDGKEVVEVGQK 99.6 0.0012139000000000002 946420000.0 58027.0 65278.0 67514.0 89120.0 77548.0 59279.0 72506.0 70169.0 109150.0 58996.0 True False 54808.1266360433 62141.94689572441 71866.06046621929 97589.93800509503 83650.5864122368 58909.0177725714 79835.61407036819 69925.60011656776 89331.1114475863 58473.34133819349 0.93731819290176 1.062739796864228 1.229039743950428 1.6689646216839578 1.4305764729336254 1.0074508557986808 1.365333539067338 1.195854358863086 1.5277237353500988 1.0 15.835491413047174 -4.740752499362742 3.14899227553238 1.3233904746950698 0.9710739415920341 0.27917912428261826 0.20011234732695762 0.3042245282811967 6.079005373595242 0.05366577658559209 0.15894716737737832 1.816550604188195e-05 4.740752499362742 -0.3523165331030357 VDEDSAEDT(ph)QSNDGKEVVEVGQK ddPTM_KYSE-520_SHP099_60min_R1 1 VDEDSAEDTQSNDGKEVVEVGQK 23 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 VDEDS(0.15)AEDT(0.486)QS(0.364)NDGKEVVEVGQK 76.161 0.0044993 0.0 67020.0 82744.0 94909.0 59779.0 83725.0 76552.0 51435.0 75995.0 91854.0 96808.0 True False 63302.26699894223 78768.85403872389 101026.98599976911 65460.37818678831 90313.6811699143 76074.21057247734 56634.55175722546 75731.3910823663 75175.62905090791 95950.3564354843 0.6597397795130214 0.8209334177063426 1.0529089182456375 0.6822317354370953 0.9412542540229122 0.7928496922638176 0.5902484770372454 0.7892768082970807 0.7834846252129868 1.0 16.550000545290068 -6.516491162984903 24.968804218688344 0.7615289254470525 0.8380691202234954 0.002061432954337583 0.14164781338526156 934.3983258147465 3652552.9625207144 0.05158724848267657 0.041439544809372 3.0444499377963803e-07 6.516491162984903 0.07654019477644292 VDEDSAEDTQS(ph)NDGKEVVEVGQK ddPTM_KYSE-520_SHP099_60min_R1 2 VDEDSAEDTQSNDGKEVVEVGQK 23 1 Q9H2G2-2;Q9H2G2 Q9H2G2-2 SLK STE20-like serine/threonine-protein kinase 1 VDEDSAEDT(0.078)QS(0.922)NDGKEVVEVGQK;VDEDSAEDTQS(1)NDGKEVVEVGQK 309.25 9.806699999999999e-61 1270830000.0 946840.0 836610.0 687240.0 812850.0 887370.0 758100.0 907910.0 946540.0 1019470.0 920800.0 True False 894316.8977212557 796417.9998227878 731540.5900228788 890103.0196077367 957200.9705553525 753368.4166970841 999690.403147711 943256.6736640964 834359.9467473286 912642.42837156 0.9799203608328809 0.8726506406718862 0.8015632051297203 0.9753031328994417 1.0488236584215123 0.8254803779409308 1.095380153354772 1.0335446220127655 0.9142243674076036 1.0 19.79969020007922 -5.425188042397669 9.090972054634811 0.9877351881040045 0.8837676954565176 0.24359379427094396 0.08088746093281571 0.5176107615127978 44.599255190908174 0.02273719494131117 0.033735107443594765 3.7567470807289647e-06 5.425188042397669 -0.10396749264748695 VDEEGLKK ddPTM_KYSE-520_SHP099_60min_R1 6 VDEEGLKK 8 1 P29034;R4GN49 P29034 S100A2 Protein S100-A2 0 ;;;;; 135.79 0.0017515999999999999 48036040000.0 44185400.0 39493900.0 28013300.0 25982510.0 40708500.0 41798600.0 32529200.0 39620400.0 33965200.0 36117100.0 False True 41734347.78058884 37596553.76244749 29819082.14086477 28451879.938473552 43912027.350318946 41537719.43299658 35817568.990398325 39482966.07987089 27797975.873014733 35797130.59267857 1.1658573491676616 1.0502672460048224 0.8330020213118293 0.7948089544443177 1.2266912633299185 1.1603644969659135 1.000570950726535 1.1029645512410473 0.7765420136411753 1.0 25.093340613555213 -7.75063457945818 24.998984204106076 0.8882709631372495 1.0356428466823646 0.1582539378590293 0.14107373605309306 383.762714585138 887922.7118927609 0.10393168095099645 0.038416344922944136 1.775682933234696e-08 7.75063457945818 0.1473718835451151 VDEFPLCGHMVSDEYEQLSSEALEAAR ddPTM_KYSE-520_SHP099_60min_R1 5 VDEFPLCGHMVSDEYEQLSSEALEAAR 27 0 X1WI28;P27635;B8A6G2;A6QRI9 X1WI28 RPL10 60S ribosomal protein L10 0 ;;;; 209.28 6.2488e-22 1177116000.0 402859.0 354051.0 236109.0 422344.0 314547.0 330373.0 265798.0 319087.0 325953.0 229290.0 False True 380511.60819049325 337041.8585186148 251328.96392775734 462483.4467776462 339300.0593723863 328311.0195613579 292667.4557784973 317980.16167246527 266768.1518064597 227258.6689849206 1.674354645699969 1.4830759153173545 1.1059158493286516 2.035053047011965 1.4930126137229998 1.444657847499505 1.2878164652012318 1.399199260880844 1.1738524783147466 1.0 17.79397580279684 -7.637597143615249 0.7052554241924678 1.005321618154479 1.54905940632256 0.393797276046714 0.2209584158870942 0.7210562131130333 0.780577083335981 0.21570399585151606 0.09338866641343282 2.303577650856747e-08 7.637597143615249 0.5437377881680809 VDEFVTHNLS(ph)FDEINK ddPTM_KYSE-520_SHP099_60min_R1 1 VDEFVTHNLSFDEINK 16 0 P11766 P11766 ADH5 Alcohol dehydrogenase class-3 1 VDEFVTHNLS(1)FDEINK 271.05 9.5498e-30 401740000.0 445840.0 379340.0 367000.0 362630.0 377990.0 362820.0 354220.0 405820.0 417070.0 362410.0 True False 421108.3664399943 361115.9369990512 390657.40722076147 397094.2461713153 407735.6625310953 360555.5057987545 390028.0144540563 404412.3051390997 341340.60147910996 359199.3293507134 1.1723528749376768 1.005335777357386 1.0875783313039906 1.1054982950249392 1.135123674278891 1.0037755539535458 1.0858261209982452 1.1258715484522563 0.9502818451696867 1.0 18.454425130909794 -7.766086404576439 24.999593246449137 0.9751408807236965 1.0862408112753705 0.4442450276373604 0.05131309242799343 112.409455783091 604693.1461146973 0.04258507890769724 0.012431422227831808 1.713616342954598e-08 7.766086404576439 0.111099930551674 VDEHLAK ddPTM_KYSE-520_SHP099_60min_R1 7 VDEHLAK 7 0 P12429;D6RA82;D6RFJ9 P12429 ANXA3 Annexin A3;Annexin 0 ;;;;;; 117.17 0.0045257 5646370000.0 17860120.0 16474390.0 11473600.0 11322330.0 16805320.0 17421020.0 12984510.0 16490950.0 14500940.0 14868980.0 False True 16869383.540333446 15682935.575836454 12213206.614409072 12398400.839017361 18127803.074809 17312288.95218075 14297110.987405691 16433746.743466673 11867934.83494972 14737252.40509139 1.1446762989894543 1.0641695714201347 0.8287302326578653 0.841296633742528 1.230066675695006 1.1747297580517617 0.9701340924626058 1.1151160536403097 0.8053017284856718 1.0 23.812964239455766 -7.755650410913165 24.99908938132152 0.902650861289265 1.040529493877247 0.1541244050970595 0.1339270518217945 267.08277498109874 1153408.7053190803 0.1025175612269779 0.03639464124745157 1.7552928714434828e-08 7.755650410913165 0.13787863258798194 VDELAHFLLR ddPTM_KYSE-520_SHP099_60min_R1 2 VDELAHFLLR 10 0 P43358;C9JZJ5;C9J9C2;C9JK50;C9JIR1 P43358 MAGEA4 Melanoma-associated antigen 4 0 ; 141.95 0.00038715 128294000.0 194113.0 155503.0 101713.0 110473.0 192543.0 185546.0 125961.0 142270.0 134255.0 130969.0 False True 183345.16493532807 148032.40246523853 108269.58272655397 120972.32070508141 207695.0386801889 184387.93858920602 138694.36714089397 141776.49857606753 109877.67629313514 129808.71655234 1.4124256814556957 1.1403887689279368 0.834070204237007 0.9319275617081101 1.6000084138914081 1.420458837329766 1.068451879230862 1.092195519234658 0.8464583828531385 1.0 16.98602773685409 -7.381996108079991 2.2508586750147668 0.9356640267928407 1.2021850371740386 0.1970683667693065 0.222081527766526 0.6251185535222153 5.895359070799694 0.1858356701864219 0.06963340900839664 4.149577612521323e-08 7.381996108079991 0.2665210103811979 VDGAEWGVDLPSVEAQLGSHR ddPTM_KYSE-520_SHP099_60min_R1 3 VDGAEWGVDLPSVEAQLGSHR 21 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;; 176.67 2.7721999999999996e-09 561228000.0 581084.0 619662.0 422054.0 451357.0 646334.0 593112.0 415711.0 431205.0 453382.0 406141.0 False True 548850.1121577651 589892.5073883747 449260.27615027665 494253.8335745692 697196.8086625913 589410.1680042739 457735.12482838443 429709.25049900345 371059.25763013825 402542.90671291656 1.3634574178428913 1.4654152328886298 1.1160556270109059 1.22782894775254 1.7319813541263427 1.464217001902424 1.1371089073861873 1.0674868276972553 0.9217880912624511 1.0 18.618783041522015 -6.9554030444092145 3.3208447625576487 1.004768377683245 1.3921701865426463 0.5744065139796666 0.15605005199531538 0.20297625158331808 4.602332216671595 0.08159455696244554 0.0499223704712322 1.1081459296757997e-07 6.9554030444092145 0.38740180885940134 VDGDS(ph)PESR ddPTM_KYSE-520_SHP099_60min_R1 2 VDGDSPESR 9 0 P16144-4;P16144-2;P16144-3;P16144;J3QRK0 P16144-4 ITGB4 Integrin beta-4 1 VDGDS(0.996)PES(0.004)R;VDGDS(1)PESR 117.14 0.0015520999999999998 2670800000.0 1444890.0 1526990.0 1332160.0 1744810.0 1643170.0 1689740.0 1602600.0 1890750.0 2287700.0 1559180.0 True False 1364739.071383196 1453631.1083412804 1418033.1651313633 1910636.217803745 1772478.130641601 1679193.7058827707 1764606.447868756 1884191.4295543693 1872311.3482239428 1545366.8782236842 0.8831165534956268 0.9406381933150728 0.917602923366208 1.2363641570990045 1.1469626763833383 1.0865987420494694 1.1418689456429116 1.219251852815783 1.2115643052839749 1.0 20.55951795150588 -5.248712342650063 24.57274676037413 1.1551047589170849 0.9164710815764914 0.7220375494651754 0.06677987889958606 311.8760024312544 602153.6589081837 0.017901259192337166 0.03072854331118624 5.640111080072752e-06 5.248712342650063 -0.2386336773405935 VDGETAS(ph)DSESR ddPTM_KYSE-520_SHP099_60min_R1 3 VDGETASDSESR 12 0 O95674 O95674 CDS2 Phosphatidate cytidylyltransferase 2 1 VDGET(0.054)AS(0.772)DS(0.137)ES(0.037)R;VDGET(0.049)AS(0.951)DSESR;VDGET(0.232)AS(0.768)DSESR 194.86 2.8099000000000003e-10 732190000.0 1461720.0 1483890.0 1211720.0 1860540.0 1623730.0 1605160.0 1783790.0 2066740.0 2158360.0 1427680.0 True False 1380635.4777334225 1412601.697035702 1289829.4100205505 2037365.1622082535 1751508.3132400708 1595141.6010361311 1964112.9013127498 2059570.9613207434 1766456.2318278726 1415031.8659182335 0.97569214587087 0.9982826048366377 0.9115196915961765 1.439801612443674 1.2377871872895903 1.1272831654579185 1.3880343959874077 1.4554944032898225 1.2483508494570863 1.0 20.43240311162837 -5.250458886697027 24.970698443221046 1.28745225085181 0.9654765702813576 0.5276156306071456 0.13339254286389848 539.3134511739703 1226448.350127198 0.035932966814954496 0.061461557729886894 5.617474547166509e-06 5.250458886697027 -0.32197568057045245 VDGIPNDS(ph)SDS(ph)EMEDKTTANLAALK ddPTM_KYSE-520_SHP099_60min_R1 1 VDGIPNDSSDSEMEDKTTANLAALK 25 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 2 VDGIPNDS(0.571)S(0.558)DS(0.764)EMEDKT(0.055)T(0.053)ANLAALK 49.25 0.059013 57468000.0 84005.0 84788.0 74201.0 69308.0 79929.0 82098.0 73691.0 70208.0 96087.0 74629.0 True False 79345.07519018427 80714.65721061733 78984.1151857977 75895.01148179003 86218.95756619996 81585.5959292932 81140.40543485367 69964.46483467032 78640.0229561542 73967.84512048344 1.072696859844194 1.091212770618696 1.067816901481224 1.0260541098387752 1.1656275429649348 1.1029873291076884 1.0969686260656522 0.945876748480476 1.0631649851102247 1.0 16.174610626414175 -7.238041737214572 24.624907177159553 1.003390646203822 1.08937658709611 0.46749814294820125 0.0420779751448337 548.0750354939355 576824.1178582329 0.01975856782143087 0.011398273764824088 5.7804049302863504e-08 7.238041737214572 0.08598594089228806 VDGIPNDS(ph)SDSEMEDKTTANLAALK ddPTM_KYSE-520_SHP099_60min_R1 2 VDGIPNDSSDSEMEDKTTANLAALK 25 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 VDGIPNDS(0.49)S(0.49)DS(0.019)EMEDKTTANLAALK;VDGIPNDS(0.5)S(0.5)DS(0.001)EMEDKTTANLAALK 124.08 0.00010923 1525270000.0 1315230.0 1379430.0 1155540.0 955300.0 1194860.0 1257610.0 1006030.0 960260.0 1447760.0 1104430.0 True False 1242271.570053996 1313160.1122333582 1230027.9573293712 1046091.4247785821 1288888.6841765754 1249760.7895032559 1107729.3303066292 956929.0821863689 1184883.2790596215 1094645.6094335373 1.134861876161777 1.1996212298452453 1.123676874715546 0.955643923260167 1.1774483659999841 1.1417035602508727 1.0119524718871 0.8741907645174454 1.082435510496206 1.0 20.0620324434733 -6.861425142812629 4.958620354539054 0.9768199008978176 1.120443924042051 0.4041339186821158 0.07735390205861362 0.21130366125489394 8.478306225852197 0.033840834675841404 0.022611497754042146 1.375861940341786e-07 6.861425142812629 0.1436240231442334 VDGIPNDSS(ph)DSEMEDKTTANLAALK ddPTM_KYSE-520_SHP099_60min_R1 1 VDGIPNDSSDSEMEDKTTANLAALK 25 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 VDGIPNDS(0.199)S(0.793)DS(0.008)EMEDKTTANLAALK 174.98 1.0137999999999999e-10 988410000.0 833790.0 747180.0 720690.0 636900.0 771870.0 815070.0 709860.0 595200.0 897670.0 682950.0 True False 787538.0065808428 711284.3512599554 767146.8305447705 697430.784509032 832611.7776604577 809982.8457951355 781619.576365977 593135.3901207236 734675.7564191921 676899.5943270591 1.1634487790818888 1.050797425823663 1.1333244058262892 1.0303312195103087 1.2300373417836068 1.1966070781891682 1.1547053402255698 0.8762531328008701 1.0853541094962116 1.0 19.368582326687342 -7.237246450662255 24.93877795039697 0.9856027013129213 1.1353404807390923 0.4651406635936336 0.07360683839109032 640.3201146851846 660061.7907748155 0.034728570400722816 0.020037505312389414 5.790999792043673e-08 7.237246450662255 0.14973777942617106 VDGPRS(ph)PS(ph)YGR ddPTM_KYSE-520_SHP099_60min_R1 3 VDGPRSPSYGR 11 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 VDGPRS(0.826)PS(0.999)Y(0.175)GR;VDGPRS(1)PS(0.998)Y(0.002)GR;VDGPRS(0.988)PS(0.9)Y(0.112)GR 116.19 0.00092003 7922050000.0 7955280.0 7515370.0 6858060.0 6124640.0 7702290.0 6874780.0 6437690.0 6848180.0 9208600.0 6371880.0 True False 7513984.759942484 7154320.344399642 7300141.52088397 6706723.944159842 8308416.402964695 6831871.947949848 7088474.530999762 6824425.26195722 7536550.36991519 6315430.100447632 1.1897819531578537 1.1328318468590999 1.1559215136220955 1.0619583840670606 1.3155741209732972 1.0817746122256362 1.1224056664798392 1.080595486516985 1.1933550447151662 1.0 22.590449558705693 -13.999999999994154 0.23579447857412641 0.1892333929602608 1.1609489203556214 0.28700607673418055 0.07011094995013649 216.8129951253015 2.167929341846632 84.08247385791591 0.11190887560414442 1.000000000013461e-14 13.999999999994154 0.9717155273953606 VDHGAEIITQS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 2 VDHGAEIITQSPGR 14 0 A0A669KB77;P11137-3;P11137;P11137-2;P11137-4 A0A669KB77;P11137-4 MAP2 Microtubule-associated protein 2 1 VDHGAEIIT(0.17)QS(0.83)PGR;VDHGAEIITQS(1)PGR 220.27 5.6687e-14 799510000.0 727580.0 648530.0 635460.0 630860.0 721110.0 654800.0 604620.0 583980.0 799890.0 564830.0 True False 687219.6870052292 617373.6453366235 676422.7683719496 690816.7447250242 777857.2544453498 650713.1503142735 665740.8901225548 581954.3096819563 654650.1395859818 559826.045631091 1.2275593327040144 1.1027955025576905 1.2082731299316725 1.2339846459738535 1.3894624241151063 1.162348832092522 1.189192420249162 1.0395270356275048 1.1693813546098875 1.0 19.0946190835854 -7.05719762945569 2.2894131068829093 1.0766531791372709 1.2237809711333891 0.4167732103007321 0.0793108457773652 0.3453275472368648 3.542414721951212 0.047637891273229115 0.024552887200040906 8.76601825134083e-08 7.05719762945569 0.14712779199611825 VDHQTGPIVWGEPGTNGQHAFYQLIHQGTK ddPTM_KYSE-520_SHP099_60min_R1 1 VDHQTGPIVWGEPGTNGQHAFYQLIHQGTK 30 0 P06744-2;P06744;A0A2U3TZU2;K7EQ48;K7ESF4 P06744-2 GPI Glucose-6-phosphate isomerase 0 178.63 6.7129e-11 736060000.0 474530.0 400160.0 250850.0 454050.0 354590.0 206760.0 324170.0 274980.0 247640.0 275800.0 False True 448206.8749478968 380935.71294759447 267020.1923741911 497202.77548489 382494.2156588822 205469.53414627234 356940.2671943187 274026.1585608142 202674.81849638358 273356.62656915333 1.639641520943741 1.3935484854662046 0.976819899065592 1.8188795410785785 1.3992498387893275 0.7516537525542406 1.3057677498958324 1.0024492985594096 0.7414300543583539 1.0 18.06042482346097 -6.174588864079983 7.456857743975885 0.9827255213702618 1.4400813529990026 0.4872943473596386 0.2485264034729915 0.27139876528748036 20.546362412599592 0.08283538680354441 0.08286866845602875 6.689769219188303e-07 6.174588864079983 0.4573558316287408 VDIDAPDVDVHGPDWHLK ddPTM_KYSE-520_SHP099_60min_R1 8 VDIDAPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ;;;;;;; 265.27 7.725e-30 23022800000.0 21382340.0 21758130.0 14500040.0 13658270.0 23364430.0 21219880.0 15360730.0 18426380.0 19631320.0 16688430.0 False True 20196218.975561973 20712836.775181036 15434735.779284284 14956347.874291385 25203077.71557817 21087438.85780519 16913542.49467805 18362463.18852943 16066767.153304907 16540583.493602084 1.2210100679564233 1.2522434159104958 0.9331433673578962 0.9042212978808466 1.5237115259765017 1.2748908686299871 1.0225481163479044 1.11014603539422 0.9713543152525151 1.0 23.979506792824594 -6.784528493209972 24.77345131476719 1.0351908642227643 1.1791355184665264 0.17542194114467058 0.167982608075251 480.9282639928252 516006.2595455825 0.0766353329430164 0.05170517978284219 1.6423719033374315e-07 6.784528493209972 0.14394465424376213 VDIDAPDVEVHDPDWHLK ddPTM_KYSE-520_SHP099_60min_R1 5 VDIDAPDVEVHDPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ;;;; 294.38 5.527999999999999e-38 5185850000.0 4828580.0 5067290.0 3129830.0 2829400.0 4815560.0 5063660.0 3478130.0 4239640.0 4403930.0 4119970.0 False True 4560729.041864406 4823849.782242647 3331583.84970506 3098305.3253098717 5194517.175211623 5032055.819670699 3829733.3236776195 4224933.678379419 3604287.326040945 4083470.27108816 1.116875779445571 1.1813113508861646 0.8158707247836194 0.7587432060535702 1.2720839948290825 1.2322988746358035 0.9378624232415619 1.0346429379669666 0.8826530100047667 1.0 21.96136429380571 VDIDT(ph)PDIDIHGPEGK ddPTM_KYSE-520_SHP099_60min_R1 12 VDIDTPDIDIHGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK;VDIDT(1)PDIDIHGPEGK 261.02 3.771e-29 9387490000.0 10415610.0 8555830.0 7920139.0 8694340.0 9253440.0 12063570.0 11786580.0 13051360.0 14153030.0 13001420.0 True False 9837835.350296224 8144795.084237355 8430683.832610458 9520647.459551368 9981633.083128493 11988276.78487591 12978082.532335544 13006087.878370324 11583196.520852344 12886237.533751693 0.7634373745268097 0.6320537754254856 0.6542393627720094 0.7388229058027872 0.7745963906830488 0.9303162970165777 1.0071273712240125 1.0093006468571388 0.8988811893707207 1.0 23.61932775772058 -6.147395613192968 1.750558000892035 0.9820226921552836 0.6846456338390879 0.8927056531524034 0.045380166873845336 0.1066970255964231 0.6493068710197986 0.018428668637961165 0.018264639465296044 7.122039644207814e-07 6.147395613192968 -0.29737705831619565 VDIDT(ph)PDINIEGSEGK ddPTM_KYSE-520_SHP099_60min_R1 8 VDIDTPDINIEGSEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDIDT(1)PDINIEGSEGK;VDIDT(1)PDINIEGSEGK;VDIDT(1)PDINIEGSEGK;VDIDT(1)PDINIEGSEGK;VDIDT(1)PDINIEGSEGK;VDIDT(1)PDINIEGSEGK;VDIDT(1)PDINIEGSEGK;VDIDT(1)PDINIEGSEGK 340.9 5.4218e-58 4141420000.0 4544480.0 4680750.0 3707370.0 3524210.0 3583130.0 6151270.0 4435150.0 5637790.0 6761470.0 5940780.0 True False 4292388.63520372 4455879.744051007 3946353.00220173 3859149.85880763 3865101.9457790954 6112877.642232253 4883498.244892747 5618233.8223600825 5533757.490788014 5888149.3110569045 0.728987735950135 0.7567538641867745 0.6702195874671819 0.6554096465524113 0.6564205052547014 1.0381662079718916 0.8293774472944155 0.9541595373286529 0.9398126980911633 1.0 22.489382824888622 -6.252989423683326 24.999913139149037 0.941755292376078 0.6936531640387649 0.830268430224242 0.05839704385003212 259.1128628245668 766607.8069720117 0.019508337453598246 0.019204277061399908 5.584837952539913e-07 6.252989423683326 -0.24810212833731315 VDIDTPDIDIHGPEGK ddPTM_KYSE-520_SHP099_60min_R1 1 VDIDTPDIDIHGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 125.98 0.00015818 267080000.0 298050.0 345980.0 252680.0 183480.0 262170.0 284510.0 190750.0 221870.0 330540.0 232100.0 False True 281516.572352055 329358.6014734324 268968.1571022945 200917.88403472665 282801.28745675023 282734.26755637396 210032.87154059962 221100.3847548472 270522.26823532 230043.77457106733 1.223752187499802 1.4317214281827209 1.1692042421221978 0.8733897903099185 1.2293368424511941 1.2290455070281807 0.9130126295841762 0.9611230956677889 1.1759599612714042 1.0 17.81154888929147 -4.98116876549463 8.138854167005228 1.0584645911213166 1.322196273260819 0.42234431978178 0.12732162148470783 0.17327237776593366 57.204390045944876 0.0340739729239397 0.06976981017212006 1.0443143230396632e-05 4.98116876549463 0.2637316821395024 VDIDVPDVDVQGPDWHLK ddPTM_KYSE-520_SHP099_60min_R1 2 VDIDVPDVDVQGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 203.56 7.0006e-13 474450000.0 834040.0 954720.0 654320.0 567110.0 903760.0 926600.0 640960.0 767230.0 879250.0 737200.0 False True 787774.1385824807 908853.8181360636 696498.5141490162 621007.9638921615 974880.7703090078 920816.7456951825 705754.4919667774 764568.6582028285 719600.36408878 730668.9815329219 1.0781546206187018 1.2438653358861838 0.9532339975453494 0.8499169659416842 1.3342304038468102 1.2602379038498885 0.9659018102645132 1.0463953958997767 0.9848513927320135 1.0 19.478858437577703 VDIGLLPS(ph)PGETGVPWR ddPTM_KYSE-520_SHP099_60min_R1 1 VDIGLLPSPGETGVPWR 17 0 Q9NXL9-4;Q9NXL9 Q9NXL9-4 MCM9 DNA helicase MCM9 1 VDIGLLPS(0.995)PGET(0.005)GVPWR 115.56 0.00013271 33675000.0 72056.0 70852.0 62890.0 53621.0 68155.0 68649.0 68315.0 78710.0 81410.0 60734.0 True False 68058.91003992523 67448.16356897975 66943.99002755774 58717.12371825852 73518.41075109606 68220.53612694643 75220.94689014986 78436.97338105201 66627.99617909297 60195.944010337014 1.1306228543942756 1.1204768805917782 1.1121013405165958 0.9754332236765894 1.22131834560932 1.1333078540180617 1.249601582412807 1.3030275489588234 1.1068519195853366 1.0 15.877378661329999 -5.80066891505126 24.99924026633369 1.1864129611439278 1.0891767430900894 0.16142291450361068 0.0888091948183824 240.94258501195316 153540.79182153827 0.026951386339062057 0.03056048694136586 1.5824539653285527e-06 5.80066891505126 -0.09723621805383842 VDINAPDVDVHGPDWHLK ddPTM_KYSE-520_SHP099_60min_R1 2 VDINAPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 211.43 4.295e-18 1553920000.0 899890.0 881320.0 579380.0 589140.0 907580.0 868890.0 654620.0 790350.0 867890.0 721730.0 False True 849971.3078137586 838980.0643117093 616727.7618407772 645131.6884686003 979001.3825761812 863466.9352116194 720795.3780755312 787608.4603190763 710303.0537264836 715336.0336974425 1.1882126270368498 1.1728474797713924 0.8621511188986567 0.9018582289697211 1.3685894970450465 1.2070787637364149 1.0076318598825091 1.1010328338250637 0.9929641738513516 1.0 19.44826159082218 -7.666350493714368 1.7106928353856887 0.9927930994056888 1.10256069659479 0.07561671798665914 0.14215476324449489 1.1940116176866258 6.491648634417153 0.14310052948928498 0.0438390622330873 2.1560037221461258e-08 7.666350493714368 0.10976759718910123 VDINAPDVEVHGPDWHLK ddPTM_KYSE-520_SHP099_60min_R1 2 VDINAPDVEVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 181.4 2.6065e-09 1069620000.0 969240.0 999570.0 625020.0 661570.0 1108110.0 959880.0 656910.0 850820.0 878530.0 722910.0 False True 915474.3250679623 951549.1568148406 665309.7892673577 724445.4138917272 1195311.9527165561 953889.032870594 723316.8736237765 847868.7040028818 719011.0979390567 716505.5798154686 1.2776932250879842 1.328041516522322 0.928547952744072 1.0110813290223133 1.668252120275743 1.3313071938899093 1.0095062676414357 1.1833385920333583 1.003496857797302 1.0 19.450618414012524 -6.765738417351071 24.98569697179313 1.0643636301059545 1.2532133179793683 0.21642866954458373 0.19328780416317992 215.56020167462063 1252801.921893509 0.08586351080762523 0.06018144076707375 1.714989962907345e-07 6.765738417351071 0.18884968787341383 VDINT(ph)PDVDVHGPDWHLK ddPTM_KYSE-520_SHP099_60min_R1 8 VDINTPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK;VDINT(1)PDVDVHGPDWHLK 254.33 3.7359e-24 33762340000.0 21747310.0 18878600.0 18229520.0 19014300.0 18994900.0 23415220.0 22093190.0 24762530.0 30170540.0 23618930.0 True False 20540943.362112332 17971643.7186437 19404624.02746329 20821413.355142258 20489690.563803 23269076.92654515 24326585.253955763 24676634.563047934 24692330.47342062 23409684.65544946 0.8774549364692392 0.767701230629783 0.8289143708284065 0.8894358750063432 0.8752655520728372 0.9939936085866249 1.0391675758132375 1.0541207592603579 1.0547912471632794 1.0 24.480602164698052 -6.199370455600959 1.312599751917634 1.046769526948133 0.8255395244074063 0.8839959408138456 0.03323179628252196 0.1293804283512968 0.4539401991535894 0.0153472239647018 0.014592138840147702 6.318726305725247e-07 6.199370455600959 -0.22123000254072667 VDINTPDVDVHGPDWHLK ddPTM_KYSE-520_SHP099_60min_R1 2 VDINTPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 264.88 7.9109e-30 1284950000.0 1361560.0 1242400.0 908980.0 880290.0 1395740.0 1318130.0 912470.0 1199470.0 1151860.0 1062370.0 False True 1286031.5525974298 1182713.2391195798 967574.3052194236 963952.4969311599 1505576.797325725 1309903.0617345034 1004711.3724490238 1195309.3185284024 942711.2600276385 1052958.2283113536 1.221350969126154 1.1232290202207893 0.918910436524285 0.9154707860320977 1.429854249527299 1.2440218676435213 0.9541797057422647 1.1351915834736763 0.8952978709701334 1.0 20.006016773965676 -7.4498458298540084 1.6230338028372315 0.96490716576142 1.1235181916775314 0.13640976122927673 0.15644788974676466 0.9358831477437004 4.3652065637990365 0.1458170824495131 0.049648176058470245 3.54939366755072e-08 7.4498458298540084 0.15861102591611143 VDIRPSEDS(ph)PLLEDWDIISPK ddPTM_KYSE-520_SHP099_60min_R1 2 VDIRPSEDSPLLEDWDIISPK 21 1 Q3MII6;C9JMI8 Q3MII6 TBC1D25 TBC1 domain family member 25 1 VDIRPS(0.046)EDS(0.954)PLLEDWDIISPK;VDIRPS(0.107)EDS(0.893)PLLEDWDIISPK 147.11 7.103e-07 201067000.0 170281.0 118560.0 110059.0 118435.0 117169.0 125380.0 126488.0 120453.0 150690.0 124117.0 True False 160835.17348324205 112864.19963781183 117153.57924062616 129691.02679121897 126389.53369958434 124597.45691265054 139274.64144391826 120035.1766569416 123328.49458576979 123017.41994156477 1.3074178726853587 0.9174651825036171 0.9523332491957316 1.0542492831732633 1.0274116768147257 1.0128440099933513 1.1321538161837235 0.9757575529868877 1.002528704018933 1.0 16.908503097999972 -4.249899777601115 24.904834188213787 1.0118431261228285 1.307418057096217 0.7250382257894996 0.05522150223294198 929.0777718575964 2005103.6883446341 0.014370013107048359 0.2204998647028903 5.624711120112149e-05 4.249899777601115 0.2955749309733886 VDISAPDVDVHGPDWHLK ddPTM_KYSE-520_SHP099_60min_R1 2 VDISAPDVDVHGPDWHLK 18 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 0 ; 205.31 2.6671e-13 598817000.0 716933.0 771347.0 514307.0 518248.0 806082.0 764794.0 520466.0 661021.0 696829.0 577719.0 False True 677163.2973194976 734290.332304548 547460.0521402948 567502.1341030574 869516.0674208045 760020.6369600696 573079.7825386624 658728.0724344611 570302.4192295936 572600.8591185812 1.18260964253856 1.2823772801089741 0.9560936617926382 0.9910954988377553 1.5185378323729244 1.327313127210442 1.00083640010743 1.150414048362515 0.9959859650009509 1.0 19.12717030936574 -6.7791155494112605 24.996260497792683 1.0493435867528267 1.205553904313091 0.22444372838530058 0.156615902577229 474.39717151160346 670849.3636010896 0.07142525046087074 0.04827284250242816 1.6629701377588606e-07 6.7791155494112605 0.15621031756026427 VDKDCAYCTDEMFR ddPTM_KYSE-520_SHP099_60min_R1 1 VDKDCAYCTDEMFR 14 1 P16144-4;P16144-2;P16144-3;P16144;P16144-5 P16144-4 ITGB4 Integrin beta-4 0 129.38 0.0025849000000000002 0.0 292520.0 391070.0 180510.0 222350.0 378070.0 357780.0 252970.0 313720.0 341990.0 251020.0 False True 276293.3324758371 372282.4101919624 192145.9634262119 243482.07714803473 407821.95807595743 355546.9623082479 278542.67634928186 312631.7785427983 279893.2368663314 248796.15809060508 1.1105208962881905 1.4963350441142536 0.7723027754963859 0.978640823944576 1.6391810918858292 1.4290693435015462 1.119561807091265 1.2565779992026482 1.124990188813131 1.0 17.924604681985606 -8.022202827825362 3.248802480958567 1.000191867958983 1.2279660551832003 0.0793741487237487 0.24042250180537234 0.6856336809142313 18.473515054089543 0.24211306023295484 0.06440898787727699 9.501609379444078e-09 8.022202827825362 0.22777418722421738 VDKETNTET(ph)PAPS(ph)PTVVRPK ddPTM_KYSE-520_SHP099_60min_R1 1 VDKETNTETPAPSPTVVRPK 20 2 H0YAU4;H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03 H0YAU4 WWC1 Protein KIBRA 2 VDKET(0.277)NT(0.277)ET(0.446)PAPS(0.867)PT(0.133)VVRPK 79.426 0.0033455 0.0 282700.0 243640.0 259070.0 297490.0 274900.0 235630.0 295840.0 334640.0 326670.0 306780.0 True False 267018.0674515214 231935.1686889042 275770.0667266561 325763.3601563702 296533.0660329588 234159.3457674897 325746.39432016265 333479.21194556326 267354.96268055914 304062.16787122836 0.8781693208364044 0.7627886438905144 0.9069529059052356 1.0713709056179999 0.9752382813982364 0.7701035199704858 1.0713151083567807 1.0967468076685987 0.8792773022449314 1.0 18.214006798467725 -4.990862918348318 7.533147148796043 0.9802226367410305 0.8232223473470579 0.3099304888827814 0.09571862315582162 0.1630602766081261 58.748538515332065 0.025993895803483543 0.05219255221318465 1.0212617861228338e-05 4.990862918348318 -0.1570002893939726 VDKETNTETPAPS(ph)PTVVRPK ddPTM_KYSE-520_SHP099_60min_R1 1 VDKETNTETPAPSPTVVRPK 20 2 H0YAU4;H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03 H0YAU4 WWC1 Protein KIBRA 1 VDKET(0.002)NT(0.007)ET(0.334)PAPS(0.626)PT(0.031)VVRPK 100.27 0.00064152 1404300000.0 1029100.0 761480.0 1046800.0 792270.0 913950.0 949090.0 956810.0 904670.0 1329700.0 842040.0 True False 972013.7715400095 724897.3577952178 1114278.4029392202 867567.1025953392 985872.6653358388 943166.3772629392 1053533.6923657206 901531.9109215656 1088259.9990092122 834580.1806972069 1.1646739211180295 0.868577249449705 1.3351364299213935 1.0395251680558422 1.181279747755623 1.130108764954159 1.2623516790029694 1.0802220466922992 1.3039609904228515 1.0 19.670691134854366 -4.756914876800088 24.999999793322864 1.1675443484243804 1.0166256708602737 0.19013724235654028 0.1237727952632346 164.70038847904178 910015.2338119606 0.02878906180717865 0.07097375170136543 1.750189698159101e-05 4.756914876800088 -0.1509186775641067 VDKLDASESLR ddPTM_KYSE-520_SHP099_60min_R1 3 VDKLDASESLR 11 1 A0A087WVQ6;Q00610-2;Q00610;J3KS13;K7EJJ5 A0A087WVQ6 CLTC Clathrin heavy chain;Clathrin heavy chain 1 0 ;; 173.19 1.0995e-05 2279600000.0 2904900.0 3257120.0 1971810.0 1921900.0 2826930.0 2954670.0 2086910.0 2555920.0 2451550.0 2461540.0 False True 2743759.4062254177 3100643.0661632046 2098916.02760755 2104556.7981596948 3049393.3079685415 2936228.8085508104 2297875.2290788665 2547054.1100762133 2006410.3185463133 2439732.670649141 1.124614774083172 1.2708945957338083 0.8603057428620202 0.8626177873823094 1.2498882949979875 1.2035043199095934 0.9418553338745386 1.0439890159762943 0.8223894128582812 1.0 21.218291645039464 -6.795614068435745 24.98436276549988 0.9557240581777546 1.0890538312551494 0.1930713613520436 0.1430446845750182 376.56338239026866 275293.89463645674 0.06443972583002813 0.04344781101668012 1.6009800920457634e-07 6.795614068435745 0.1333297730773948 VDKWWGNR ddPTM_KYSE-520_SHP099_60min_R1 3 VDKWWGNR 8 1 A0A2R8Y5Y7;P32969;H0Y9R4;D6RAN4;E7ESE0 A0A2R8Y5Y7 RPL9 60S ribosomal protein L9 0 ;; 131.44 0.00086568 5238030000.0 4810820.0 4161740.0 2995370.0 2623020.0 4660190.0 4212080.0 3744390.0 3811290.0 3340870.0 3076780.0 False True 4543954.224468092 3961803.763500903 3188456.342961454 2872311.0321602817 5026920.440145988 4185790.846328258 4122909.4829248036 3798069.524551776 2734252.224479139 3049522.1228986173 1.4900545204600761 1.299155606628342 1.0455593415832567 0.9418888981300803 1.6484289136318262 1.3726055026449848 1.3519854314111075 1.2454638371147977 0.8966166219775413 1.0 21.540151751363524 -7.697367673906011 5.334477240990102 0.9486223282747177 1.2976796089862164 0.3523664408593624 0.19112145606780911 0.22700552702774596 12.114956274086142 0.1514576951862425 0.05244713211204616 2.007392633507057e-08 7.697367673906011 0.34905728071149866 VDLKS(ph)PQVDIK ddPTM_KYSE-520_SHP099_60min_R1 1 VDLKSPQVDIK 11 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VDLKS(1)PQVDIK 118.2 0.00033142 0.0 186460.0 154770.0 136540.0 152120.0 166530.0 200280.0 167990.0 223280.0 267280.0 217970.0 True False 176116.69210120526 147334.61688549374 145341.58687172417 166577.43906345428 179634.9635739126 199029.97822990606 184972.0686244056 222505.4937939439 218748.68958049343 216038.95537809414 0.8152080340926473 0.6819817131018823 0.6727563860756451 0.7710527889376421 0.8314933909004042 0.9212689344918359 0.856197755171896 1.0299322795952819 1.0125428036700925 1.0 17.72093195193449 -6.400939910803378 0.8083034059960734 1.0161903251031172 0.7140122379275844 0.8237633081543313 0.051925403657721164 0.2532050330259141 0.3515815687552547 0.03788897389789906 0.03139489164336781 3.972465088882286e-07 6.400939910803378 -0.30217808717553285 VDLNSNGFICDYELHELFK ddPTM_KYSE-520_SHP099_60min_R1 2 VDLNSNGFICDYELHELFK 19 0 P13797;U3KQI3 P13797 PLS3 Plastin-3 0 ; 235.24 9.315499999999999e-26 896170000.0 938080.0 820370.0 507250.0 719920.0 866280.0 811510.0 614660.0 652320.0 644700.0 467670.0 False True 886042.8323838814 780958.1937995255 539948.1466286954 788340.9803481592 934451.3075410374 806445.0650756491 676795.8313035124 650057.254172632 527638.731564443 463526.8076417538 1.9115244636911655 1.6848177514753473 1.1648692971518606 1.7007451723427498 2.0159595780342596 1.7398024273472585 1.460100732354164 1.402415660660218 1.1383133032776809 1.0 18.822293252626174 -7.538400264301909 1.3173399123888625 1.012520467733512 1.6846103637906091 0.5705214481918524 0.2140682163819719 0.3597491855462056 1.1230136525663017 0.21382043303445625 0.07167771758168674 2.8946745025413317e-08 7.538400264301909 0.6720898960570971 VDLPDKYPFK ddPTM_KYSE-520_SHP099_60min_R1 2 VDLPDKYPFK 10 1 H7C4M9;C9JZG9;C9JZY6;C9J8Q9;P62256-2;P62256 H7C4M9 UBE2H Ubiquitin-conjugating enzyme E2 H 0 ; 120.06 0.0022129000000000003 659640000.0 1835430.0 1701940.0 1098980.0 1101920.0 1813680.0 1739350.0 1344980.0 1454060.0 1456620.0 1467140.0 False True 1733615.0390610069 1620176.2477359786 1169822.0092301716 1206646.1454956727 1956406.297572412 1728494.0714708753 1480943.704139849 1449016.205240157 1192134.5264020436 1454142.2810176474 1.1921907929448121 1.114180000737023 0.8044756173457105 0.8297992302728655 1.3454022505990728 1.1886691515917063 1.018431087158435 0.996474845794386 0.819819726009037 1.0 20.47173700644687 -7.400272587364495 2.8402744061446925 0.9112093248135674 1.0686879123540864 0.13652314712990166 0.15968587085791736 0.6311158431164471 9.573068381406179 0.12184745722771456 0.04796225912989881 3.978573747587587e-08 7.400272587364495 0.15747858754051902 VDLTLDPDTAHPALMLS(ph)PDRR ddPTM_KYSE-520_SHP099_60min_R1 7 VDLTLDPDTAHPALMLSPDRR 21 1 H0YAD6;D6REK2;Q8WV44-3;Q8WV44-2;Q8WV44 H0YAD6 TRIM41 E3 ubiquitin-protein ligase TRIM41 1 VDLTLDPDTAHPALMLS(1)PDRR;VDLTLDPDTAHPALMLS(1)PDRR;VDLTLDPDTAHPALMLS(1)PDRR;VDLTLDPDTAHPALMLS(1)PDRR;VDLTLDPDTAHPALMLS(1)PDRR;VDLTLDPDTAHPALMLS(1)PDRR;VDLTLDPDTAHPALMLS(1)PDRR 224.99 1.4402999999999998e-19 3465509000.0 3141464.0 3306656.0 3164272.0 3105518.0 2913575.0 3139780.0 2825465.0 2872381.0 4011454.0 2866291.0 True False 2967200.7295667767 3147799.2823681515 3368246.036134206 3400665.497011969 3142856.776525927 3120183.468377745 3111090.5760810534 2862417.380729769 3283075.074126119 2840897.8916806546 1.0444587741981117 1.108029715389009 1.1856272786142188 1.197038973829559 1.1062899464741534 1.098308910543725 1.0951081998376768 1.0075748900064774 1.1556469818011923 1.0 21.437915548048647 -6.590722598701246 1.6567758946770537 1.0617089533161843 1.134345712192839 0.2278596496308819 0.05667738090548807 0.5827420639877131 3.253893424282344 0.029082255582398783 0.02052272379127396 2.5661225985474895e-07 6.590722598701246 0.07263675887665477 VDLTLLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 VDLTLLSPK 9 0 E7EVA0;P27816-4;B5MEG9 E7EVA0 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VDLT(0.126)LLS(0.874)PK;VDLT(0.009)LLS(0.991)PK 100.04 0.0025120999999999997 107658000.0 455890.0 466610.0 408030.0 388830.0 409650.0 411240.0 400490.0 461910.0 514200.0 455700.0 True False 430600.8729058161 444193.3552041115 434332.2666710832 425784.2862939981 441887.12441033684 408673.2986182677 440975.4376057399 460307.7420206047 420834.241927154 451662.8525292356 0.9533679170082818 0.983462227891233 0.9616293751830508 0.9427037975553627 0.9783561387345532 0.9048193720819995 0.9763376269187338 1.0191401383641785 0.9317441971828178 1.0 18.78488673717023 -8.514508291624347 0.5372724986007773 1.000343440223161 0.9586552527857819 0.11858213178541588 0.02994753273682855 4.161832728319018 2.1500888468647466 0.04592281813103812 0.014576148389420493 3.0583818548049525e-09 8.514508291624347 -0.04168818743737912 VDLYQQAS(ph)PPDALR ddPTM_KYSE-520_SHP099_60min_R1 1 VDLYQQASPPDALR 14 0 P48634;P48634-2;P48634-3;P48634-4 P48634 PRRC2A Protein PRRC2A 1 VDLYQQAS(1)PPDALR 82.663 0.0061805 390980000.0 467190.0 450070.0 362330.0 452280.0 381260.0 311270.0 282560.0 443480.0 593170.0 441060.0 True False 441274.039379825 428447.9616311576 385686.37154849764 495264.5552170599 411262.9929273397 309327.2484702559 311123.9223198524 441941.6713890102 485465.2805988524 437152.5515394881 1.0094280310747874 0.9800879810087436 0.8822695193937545 1.1329330081064906 0.9407768328905435 0.7075956605558421 0.7117056076287102 1.0109552599719631 1.1105168639396588 1.0 18.737777294079937 -5.998763622638658 24.999102160561343 0.8885196381559823 0.9968889352082894 0.0910008299153171 0.13144691290538607 97.5109194889464 1971557.359836559 0.0442990795489592 0.04983980169477007 1.0028509202472945e-06 5.998763622638658 0.10836929705230702 VDNDENEHQLSLR ddPTM_KYSE-520_SHP099_60min_R1 10 VDNDENEHQLSLR 13 0 P06748;P06748-3;P06748-2;E5RGW4 P06748 NPM1 Nucleophosmin 0 ;;;;;;;;; 260.15 7.984400000000001e-22 20226950000.0 13120510.0 14924260.0 9998400.0 10169020.0 13717480.0 14539120.0 9998570.0 12188120.0 12243340.0 12579750.0 False True 12392689.15521177 14207276.147829033 10642912.862005616 11135480.603372648 14796967.63421531 14448375.959067272 11009323.032239549 12145842.256448582 10020258.085485028 12468303.201897409 0.993935498242124 1.1394714996718232 0.8535975336552605 0.8931031290350773 1.1867667472157342 1.1588085182969035 0.8829848660212374 0.9741375437998848 0.8036585189843762 1.0 23.571761807905926 -6.797939130239004 24.99677539327237 0.9130399443638196 1.0340905382635976 0.21864533302049172 0.11322543375543791 303.670525999966 207965.41858425675 0.050227793219486574 0.03386481542972032 1.5924319031698868e-07 6.797939130239004 0.12105059389977801 VDNLTYRT(ph)SPDTLR ddPTM_KYSE-520_SHP099_60min_R1 1 VDNLTYRTSPDTLR 14 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLTYRT(0.765)S(0.235)PDTLR 145.48 1.1604000000000001e-05 1220000000.0 509440.0 620770.0 648010.0 334800.0 443260.0 351300.0 261580.0 269000.0 824150.0 368440.0 True False 481180.3476565377 590947.2774052336 689781.7614526586 366619.29133871 478142.04019559507 349107.4063918818 288023.0591747845 268066.9017850722 674505.1351308129 365175.90824198234 1.3176672852626563 1.6182537348921846 1.8889027065706028 1.0039525693348073 1.3093471650346555 0.9559979136426141 0.7887241536863029 0.7340760869893934 1.847069097131826 1.0 18.47823206394759 -5.276218317919918 24.539391079917493 1.0710685660334487 1.6092724953561508 0.34969626363073725 0.3222328035153112 651.0419552520802 1081008.2675299111 0.09083414715969945 0.1354023290676195 5.293972513278415e-06 5.276218317919918 0.5382039293227021 VDNLTYRTS(ph)PDTLR ddPTM_KYSE-520_SHP099_60min_R1 2 VDNLTYRTSPDTLR 14 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 1 VDNLTYRT(0.335)S(0.664)PDTLR;VDNLTYRT(0.279)S(0.72)PDTLR 170.89 1.5063e-08 2179000000.0 944570.0 1269410.0 1488280.0 621050.0 757960.0 746760.0 473330.0 473270.0 1673880.0 676460.0 True False 892172.8191463881 1208425.6381767455 1584216.9101321956 680074.4052745091 817607.1397975313 742099.1938434436 521178.8156556339 471628.3368320482 1369945.5870809508 670467.0906779158 1.3306735431925576 1.802363837060063 2.3628555855446662 1.0143292858518667 1.219459017698901 1.1068391039045629 0.777336908704445 0.7034324926450606 2.0432704395614487 1.0 19.3548069948127 -5.286458047632281 24.87636345177766 1.100044493359518 1.829004330153861 0.37951487423520425 0.4143451601217471 702.0991050885973 698104.0344508897 0.11629598381578186 0.17257587984295736 5.170612030979495e-06 5.286458047632281 0.7289598367943431 VDPSLMEDS(ph)DDGPSLPTK ddPTM_KYSE-520_SHP099_60min_R1 12 VDPSLMEDSDDGPSLPTK 18 0 Q5T092;A0A0A0MR06;Q5T091;O15258 Q5T092 RER1 Protein RER1 1 VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK;VDPSLMEDS(1)DDGPSLPTK 385.34 1.4911999999999998e-86 8151280000.0 6524180.0 6983700.0 4880310.0 4629570.0 4421110.0 4526390.0 4360020.0 4834640.0 5187330.0 4020530.0 True False 6162270.729769611 6648192.56925259 5194902.591372092 5069562.940869023 4769026.204325109 4498139.121030884 4800773.371294602 4817869.762253454 4245441.633947849 3984911.2321250043 1.5464010038897409 1.6683414465188366 1.303643240404591 1.272189678906753 1.1967710010398314 1.1287928034051073 1.2047378452479427 1.2090281267530931 1.0653792234372843 1.0 21.926116156425888 -5.011453096859067 1.3291254438919593 1.14696001325298 1.6400701099035109 0.8269366378356409 0.08143174105105906 0.19227876597177085 0.612543309595992 0.025140733491873523 0.0891003887585908 9.739729672421173e-06 5.011453096859067 0.49311009665053085 VDS(ph)EGDFS(ph)ENDDAAGDFR ddPTM_KYSE-520_SHP099_60min_R1 2 VDSEGDFSENDDAAGDFR 18 0 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 2 VDS(1)EGDFS(1)ENDDAAGDFR;VDS(1)EGDFS(1)ENDDAAGDFR 192.19 1.6194e-12 919970000.0 1112910.0 933080.0 902370.0 910650.0 954660.0 967210.0 908960.0 1041540.0 1194890.0 1074240.0 True False 1051174.6637689178 888253.4362183664 960538.2140430474 997197.9022030929 1029786.3107276262 961173.2836216679 1000846.5473947247 1037927.1408372625 977928.0967256653 1064723.0693460724 0.9872751835972938 0.8342577162002421 0.9021484005535704 0.9365795960592346 0.9671869994890752 0.9027448651150178 0.9400064450650261 0.9748329595927068 0.9184811758857497 1.0 20.022046808757175 -9.278824075779127 0.166824498479231 1.0540540446576712 0.8899120598845978 0.21931310052140174 0.04156622176387265 22.005412550930576 1.1109941708778226 0.8418329958628255 0.23426601352366938 5.262303888848916e-10 9.278824075779127 -0.1641419847730734 VDS(ph)LVS(ph)LSEEDLESDQR ddPTM_KYSE-520_SHP099_60min_R1 3 VDSLVSLSEEDLESDQR 17 0 Q12802-2;Q12802;Q12802-4;A8MYJ1;H0YMW2;A0A087WTD7;A0A087WY36;H0YLH1 Q12802-2 AKAP13 A-kinase anchor protein 13 2 VDS(1)LVS(1)LSEEDLESDQR;VDS(1)LVS(1)LSEEDLESDQR;VDS(1)LVS(1)LSEEDLESDQR 248.13 1.5466e-23 299770000.0 632232.0 544770.0 497748.0 553404.0 566338.0 509840.0 505821.0 647143.0 638174.0 630438.0 True False 597160.8306367544 518598.431483559 529833.632504959 605999.3497730197 610905.5785775691 506657.899444454 556954.3230172354 644898.2119773116 522297.68865736964 624852.8097933427 0.9556823963618778 0.829952947887159 0.8479335040202358 0.9698273581796673 0.977679173403435 0.8108435962895337 0.8913368305112314 1.0320801985200299 0.8358731535993396 1.0 19.25315686326773 -13.99999999973658 0.17453904079447916 1.3722616956429448 0.885476574398889 0.12379127598107453 0.07185314161078635 282.39331283176796 2.6886993559223917 36.405961303590786 0.2460227086369321 1.0000000006065458e-14 13.99999999973658 -0.4867851212440557 VDS(ph)LVSLSEEDLESDQR ddPTM_KYSE-520_SHP099_60min_R1 6 VDSLVSLSEEDLESDQR 17 0 Q12802-2;Q12802;Q12802-4;A8MYJ1;H0YMW2;A0A087WTD7;A0A087WY36;H0YLH1 Q12802-2 AKAP13 A-kinase anchor protein 13 1 VDS(0.987)LVS(0.005)LS(0.007)EEDLESDQR;VDS(0.997)LVS(0.002)LS(0.001)EEDLESDQR;VDS(1)LVSLSEEDLESDQR;VDS(0.993)LVS(0.007)LSEEDLESDQR;VDS(1)LVSLSEEDLESDQR;VDS(0.997)LVS(0.003)LSEEDLESDQR 239.58 2.9158e-23 1082503000.0 836707.0 999799.0 833109.0 612660.0 692033.0 856159.0 636806.0 799199.0 1202997.0 902458.0 True False 790293.1947759476 951767.1553111055 886812.5391615297 670887.0221970546 746492.0599708485 850815.394104945 701180.5651076443 796426.7652034496 984563.0698865046 894462.9242216997 0.8835393545949448 1.0640655185783894 0.9914469511781868 0.7500445284311974 0.8345701535034498 0.9512025273101914 0.7839123859915865 0.8903966208509375 1.100731000944733 1.0 19.77066215777599 -7.750733895302759 24.991923729814452 1.0503654964008908 0.8940925187086144 0.32063085203856134 0.09124750090677244 233.53476613656838 545194.8965737793 0.06753370499710863 0.024946434788698697 1.775276910836139e-08 7.750733895302759 -0.15627297769227644 VDS(ph)PDVKR ddPTM_KYSE-520_SHP099_60min_R1 5 VDSPDVKR 8 1 Q7Z4V5-2;Q7Z4V5;Q7Z4V5-4;Q7Z4V5-3;K7ERA4;K7EPS6 Q7Z4V5-2 HDGFRP2 Hepatoma-derived growth factor-related protein 2 1 VDS(1)PDVKR;VDS(1)PDVKR;VDS(1)PDVKR;VDS(1)PDVKR;VDS(1)PDVKR 109.42 0.0011823 2136890000.0 5050550.0 4439920.0 4183660.0 4026760.0 4627890.0 4500400.0 4143540.0 4302750.0 4962440.0 4531650.0 True False 4770385.923478179 4226619.578744211 4453345.417692675 4409462.059710455 4992078.613907856 4472311.334261385 4562409.460253402 4287824.7645194 4061385.9889322976 4491503.106570347 1.0620911998257043 0.9410256385131619 0.9915044723398158 0.9817341667336533 1.1114494403010091 0.9957270936135193 1.0157867760526158 0.95465252116758 0.9042375998785669 1.0 22.098766901038946 -7.300253323616486 5.149379684063347 0.9457455168461788 1.012377026035126 0.2457089474061812 0.048728729753195345 0.2845852715443204 19.483848162066685 0.027275881868569527 0.013058279857873145 5.008949767682352e-08 7.300253323616486 0.06663150918894711 VDS(ph)PMAYSSNGK ddPTM_KYSE-520_SHP099_60min_R1 5 VDSPMAYSSNGK 12 0 A0A0G2JMZ8;Q16625-4;Q16625-2;Q16625-3;Q16625 A0A0G2JMZ8 OCLN Occludin 1 VDS(1)PMAYSSNGK;VDS(1)PMAYSSNGK;VDS(1)PMAYSSNGK;VDS(1)PMAYSSNGK;VDS(1)PMAYSSNGK 246.64 1.5716e-15 2071210000.0 1989750.0 2341830.0 1713500.0 2602390.0 2473930.0 2578760.0 2316110.0 3641290.0 4453010.0 2183990.0 True False 1879374.6010317106 2229324.971641509 1823954.9516969374 2849720.3631629176 2668614.216263796 2562665.0022975495 2550245.001855299 3628659.2148734787 3644455.635247059 2164641.5477185077 0.8682151569217254 1.0298818176114084 0.8426129275857946 1.3164860326027052 1.23282038038883 1.183874995376741 1.178137324649991 1.6763326097561135 1.6836300860473865 1.0 21.045696711992555 -5.609427814429494 0.6644047565512886 1.4341146883893805 0.8548190258142645 0.4082298422660905 0.2152443481782779 0.9105882121819673 0.8132250946902636 0.13741744934899033 0.31304808986141874 2.4579451407287394e-06 5.609427814429494 -0.579295662575116 VDS(ph)PSHGLVTSSLCIPS(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 2 VDSPSHGLVTSSLCIPSPAR 20 0 Q9UER7-3;Q9UER7 Q9UER7-3 DAXX Death domain-associated protein 6 2 VDS(0.98)PS(0.02)HGLVT(0.422)S(0.07)S(0.059)LCIPS(0.449)PAR;VDS(0.986)PS(0.014)HGLVT(0.002)SS(0.001)LCIPS(0.997)PAR 86.83200000000001 0.00016304 0.0 254690.0 281120.0 251170.0 261440.0 239530.0 242950.0 224730.0 241650.0 298480.0 214690.0 True False 240561.83798807225 267614.5732302771 267360.8200862088 286287.178995198 258379.64826072924 241433.65893227342 247447.9015534419 240811.77255153374 244283.55606848918 212788.01362629238 1.1305234439123881 1.2576581202561228 1.2564656041000486 1.3454102706085131 1.214258471882288 1.134620577624686 1.1628845879825764 1.1316980145999103 1.1480137057790796 1.0 17.69905736038425 -6.19468358252843 3.5408616876526895 1.1254402449398861 1.25161620552828 0.48665026837501657 0.06445740190372531 0.22600228066086678 5.608941446859332 0.02242911058492181 0.02194730172832268 6.387286804671872e-07 6.19468358252843 0.12617596058839387 VDS(ph)PSHGLVTSSLCIPSPAR ddPTM_KYSE-520_SHP099_60min_R1 2 VDSPSHGLVTSSLCIPSPAR 20 0 Q9UER7-3;Q9UER7 Q9UER7-3 DAXX Death domain-associated protein 6 1 VDS(0.712)PS(0.288)HGLVTSSLCIPSPAR;VDS(0.995)PS(0.005)HGLVTSSLCIPSPAR 331.56 5.967499999999999e-65 2089480000.0 1054160.0 1304870.0 994470.0 1319310.0 847080.0 1096030.0 924710.0 1063110.0 1402150.0 980520.0 True False 995683.6433841392 1242182.0865501976 1058575.1274082586 1444696.8257349858 913740.3767740942 1089189.2702183137 1018188.7110999102 1059422.3195417388 1147554.905325086 971833.3556330161 1.0245415405973464 1.278184247690373 1.089255808387789 1.4865684711901703 0.9402233124411723 1.1207572408428566 1.047698872649519 1.0901275546893228 1.180814487045067 1.0 19.890349424468155 VDS(ph)PTVNTTLR ddPTM_KYSE-520_SHP099_60min_R1 3 VDSPTVNTTLR 11 0 Q9H0B6;Q9H0B6-2;A8MZ87 Q9H0B6 KLC2 Kinesin light chain 2 1 VDS(0.987)PT(0.013)VNTTLR;VDS(0.987)PT(0.013)VNTTLR;VDS(0.968)PT(0.031)VNT(0.001)T(0.001)LR 178.22 5.552999999999999e-06 1583420000.0 1892150.0 1878280.0 1580270.0 1190100.0 1553410.0 1621930.0 1466000.0 1804280.0 1985770.0 1573780.0 True False 1787188.6675924875 1788044.6094442399 1682136.7327213997 1303206.7461833868 1675654.5293061407 1611806.9332456128 1614197.5867812298 1798021.3738021175 1625204.2251880295 1559837.533582311 1.1457530858922491 1.1463018237148266 1.0784050880338911 0.8354759506206086 1.074249396639306 1.033317187556033 1.03484981738712 1.1526978515979132 1.041906089703841 1.0 20.572964340910914 -4.995421208506102 15.33652548213518 1.0279429056165676 1.1376215647089443 0.29445385460037543 0.07479669272071231 1.5415150762206307 5128.708439193003 0.020668093232671964 0.042073101791805186 1.0105988309003018e-05 4.995421208506102 0.10967865909237662 VDS(ph)PTVTTTLK ddPTM_KYSE-520_SHP099_60min_R1 10 VDSPTVTTTLK 11 0 H0YG16;Q07866-4;Q07866-6;Q07866-7;Q07866-9;G3V5R9;G3V3H3;F8W6L3;E7EVH7;G5E9S8;Q07866;G3V2E7;Q07866-8;Q07866-2;Q07866-3;Q07866-5;Q07866-10;H0YJL0;H0YJT3;H0YJU9 H0YG16 KLC1 Kinesin light chain 1 1 VDS(0.996)PT(0.004)VTTTLK;VDS(0.999)PT(0.001)VTTTLK;VDS(0.995)PT(0.005)VTTTLK;VDS(0.997)PT(0.003)VTTTLK;VDS(0.953)PT(0.047)VTTTLK;VDS(0.978)PT(0.022)VTTTLK;VDS(0.88)PT(0.119)VT(0.001)TTLK;VDS(1)PTVTTTLK;VDS(0.999)PT(0.001)VTTTLK;VDS(0.994)PT(0.006)VTTTLK 265.82 1.8463999999999998e-20 17906980000.0 23044500.0 24431900.0 17771680.0 15614710.0 17271870.0 23529000.0 18510640.0 23000000.0 25405300.0 23226500.0 True False 21766175.646928176 23258154.850970432 18917270.92849336 17098727.343666248 18631067.905502632 23382146.7833606 20381876.137637176 22920218.36824034 20792337.935495786 23020731.27994358 0.9455032241261416 1.010313467810369 0.8217493483786376 0.7427534397468608 0.8093169447546886 1.0156995665785775 0.8853704901804982 0.9956338089141934 0.9032005839714898 1.0 24.45643032727295 -6.259392095005483 24.999554628848458 0.9550448522825473 0.864651419353727 0.2605161359823768 0.07899736070261702 309.15840625207926 3775167.197346621 0.029550892828024814 0.028168840918893188 5.503106339438256e-07 6.259392095005483 -0.0903934329288203 VDS(ph)TTCLFPVEEK ddPTM_KYSE-520_SHP099_60min_R1 11 VDSTTCLFPVEEK 13 0 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210 A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 1 VDS(0.988)T(0.012)TCLFPVEEK;VDS(0.873)T(0.127)TCLFPVEEK;VDS(0.484)T(0.484)T(0.031)CLFPVEEK;VDS(0.995)T(0.005)TCLFPVEEK;VDS(0.987)T(0.012)T(0.001)CLFPVEEK;VDS(0.993)T(0.006)T(0.001)CLFPVEEK;VDS(0.996)T(0.004)TCLFPVEEK;VDS(0.994)T(0.006)TCLFPVEEK;VDS(0.993)T(0.007)TCLFPVEEK;VDS(0.983)T(0.004)T(0.013)CLFPVEEK;VDS(0.991)T(0.009)TCLFPVEEK 311.21 8.714899999999998e-40 108748800000.0 123433100.0 110989000.0 84253100.0 75587800.0 75572600.0 101301600.0 78463800.0 106754900.0 117171700.0 110920200.0 True False 116586019.88521561 105656921.84211461 89684189.63572638 82771641.78569926 81519733.67072527 100669339.13847946 86395686.63689291 106384592.16868109 95896272.93818732 109937533.32260981 1.0604751294819026 0.9610632388127737 0.8157740757430827 0.7528970251024943 0.7415095755469336 0.9156958146683808 0.7858616072762543 0.9676821823580244 0.8722796486326589 1.0 26.7121087740842 -9.658898217723818 13.278422221458351 0.9999999978661775 0.8694176003639841 0.12546850305214563 0.098236670332309 0.0 0.0 0.10129343298090394 0.02456726608009945 2.1933189064976738e-10 9.658898217723818 -0.13058239750219347 VDSEGDFS(ph)ENDDAAGDFR ddPTM_KYSE-520_SHP099_60min_R1 2 VDSEGDFSENDDAAGDFR 18 0 O43823;M0QYL4 O43823 AKAP8 A-kinase anchor protein 8 1 VDSEGDFS(1)ENDDAAGDFR;VDSEGDFS(1)ENDDAAGDFR 232.49 1.974e-23 566010000.0 500440.0 437280.0 391170.0 365670.0 372710.0 418180.0 401150.0 440740.0 476500.0 411470.0 True False 472679.59559759294 416272.412429339 416385.4440941293 400423.1668573061 402040.15657018503 415569.9835040051 441702.15684671944 439211.1758094897 389979.6115874935 407824.695918816 1.1590264158296273 1.020714087682921 1.0209912451624004 0.9818511994600166 0.9858161131326326 1.0189917081106117 1.0830686843315818 1.0769607142597408 0.956243247380794 1.0 18.637589615168547 -4.261342831075035 6.940224731080135 1.0186624739388577 1.1611822791350872 0.5630335338764675 0.037723708627676045 0.08841955423229085 31.78673363369659 0.009988062228994293 0.05919704071946427 5.47844327117401e-05 4.261342831075035 0.14251980519622953 VDSGTEKPGLVAPES(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 3 VDSGTEKPGLVAPESPVR 18 1 O15021;O15021-2;O15021-3;O15021-6;H7C1I9 O15021 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 VDSGTEKPGLVAPES(1)PVR;VDSGTEKPGLVAPES(1)PVR;VDSGTEKPGLVAPES(1)PVR 207.64 5.430300000000001e-15 2753540000.0 2152810.0 1809130.0 1431260.0 1565840.0 1698160.0 2136600.0 1811870.0 2268070.0 2851770.0 2539000.0 True False 2033389.337779659 1722216.679240507 1523521.3096969682 1714656.9628130386 1831795.5307913027 2123264.6868684734 1995031.5017471376 2260202.594541517 2333960.4552714922 2516506.4353121095 0.8080207184240592 0.6843680807146075 0.6054112512166151 0.681364028620248 0.7279121185971116 0.8437350515279471 0.792778223712233 0.8981509297277818 0.9274605550460366 1.0 21.262990856481856 -7.049742233235531 0.7083373292738107 0.9892141052930995 0.6852176891335577 0.7844703029262485 0.0546005977566639 0.3277418648349565 0.31504052291784845 0.05250726209606165 0.028388628073457736 8.91780079237254e-08 7.049742233235531 -0.30399641615954176 VDSGTEKPGLVAPES(ph)PVRK ddPTM_KYSE-520_SHP099_60min_R1 5 VDSGTEKPGLVAPESPVRK 19 2 O15021;O15021-2;O15021-3;O15021-6;H7C1I9 O15021 MAST4 Microtubule-associated serine/threonine-protein kinase 4 1 VDSGTEKPGLVAPES(1)PVRK;VDSGTEKPGLVAPES(1)PVRK;VDSGTEKPGLVAPES(1)PVRK;VDSGTEKPGLVAPES(1)PVRK;VDSGTEKPGLVAPES(1)PVRK 205.38 8.477e-14 17129000000.0 6657010.0 5751650.0 5418080.0 5144760.0 6387700.0 6767030.0 6784070.0 7815560.0 9116340.0 8433680.0 True False 6287732.384879569 5475332.100597344 5767338.106034515 5633716.443571501 6890375.648958642 6724794.455667668 7469870.001742781 7788449.646525417 7461042.460229865 8358964.156503746 0.7522143015755556 0.6550251918878282 0.6899584683046165 0.6739730351862021 0.8243097493841436 0.8045009321442536 0.8936358455288745 0.9317481808395558 0.8925797886601479 1.0 22.994892743823534 -6.443253242090849 0.786300889336593 0.9560642562970422 0.6806103446105888 0.8651277026888338 0.04109414862662903 0.21649272065093075 0.2826297732935787 0.029542244352997387 0.02374382333542868 3.6036844677135e-07 6.443253242090849 -0.2754539116864534 VDSGYR ddPTM_KYSE-520_SHP099_60min_R1 1 VDSGYR 6 0 Q14697;Q14697-2;F5H6X6;E9PKU7;K7EKH1;K7EKT3;Q92947-2;Q92947 Q14697 GANAB;GCDH Neutral alpha-glucosidase AB;Glutaryl-CoA dehydrogenase, mitochondrial 0 112.66 0.066428 477680000.0 330220.0 320790.0 201030.0 224020.0 298570.0 372920.0 286070.0 303840.0 306670.0 291110.0 False True 311902.0383227501 305378.7668843933 213988.71545937276 245310.79344593134 322065.7603690808 370592.46795234975 314988.7473741513 302786.049956789 250986.458521588 288530.9918801527 1.0810001251175991 1.0583915609704715 0.7416489787282795 0.8502060449292262 1.116225880174624 1.284411305480428 1.0916981407147706 1.0494056391784679 0.8698769476585045 1.0 18.13836676533672 -4.542225674982213 24.996616727602845 1.0067469200494419 1.0753485431544445 0.034567123326429416 0.1455034173442702 1004.0635923600165 1297266.6170842703 0.04193984094817346 0.11099288593491832 2.8692892090360498e-05 4.542225674982213 0.06860162310500262 VDSLVS(ph)LSEEDLESDQR ddPTM_KYSE-520_SHP099_60min_R1 1 VDSLVSLSEEDLESDQR 17 0 Q12802-2;Q12802;Q12802-4;A8MYJ1;H0YMW2;A0A087WTD7;A0A087WY36;H0YLH1 Q12802-2 AKAP13 A-kinase anchor protein 13 1 VDSLVS(1)LSEEDLESDQR 239.75 2.8883e-23 43397000.0 33212.0 36175.0 33698.0 24528.0 24682.0 40645.0 28195.0 45295.0 42935.0 37340.0 True False 31369.66415351942 34437.09870021801 35870.226998706334 26859.133745387895 26624.33297863034 40391.31947850278 31045.225756682627 45137.8822169325 35139.08630327181 37009.1966500804 0.8476180785580839 0.9305011137047526 0.9692246859032648 0.7257421445631284 0.7193977548435249 1.091386010358456 0.8388516522045388 1.219639611302788 0.9494690369939569 1.0 15.175596199285827 -6.272800998075012 24.994902272725813 1.0222831386264284 0.8446066235376875 0.37640070184358454 0.11657313821726918 865.5995018422127 1904263.2100011427 0.04159414127432927 0.037004833985916155 5.335793355978631e-07 6.272800998075012 -0.17767651508874094 VDSLVSLS(ph)EEDLESDQR ddPTM_KYSE-520_SHP099_60min_R1 1 VDSLVSLSEEDLESDQR 17 0 Q12802-2;Q12802;Q12802-4;A8MYJ1;H0YMW2;A0A087WTD7;A0A087WY36;H0YLH1 Q12802-2 AKAP13 A-kinase anchor protein 13 1 VDSLVS(0.001)LS(0.999)EEDLESDQR 164.93 3.3643999999999996e-07 60707000.0 196420.0 204210.0 209010.0 152380.0 161700.0 184530.0 156300.0 214000.0 238460.0 186470.0 True False 185524.19104643734 194399.44507454088 222483.1190278242 166862.14938528248 174424.87005285322 183378.2798220719 172100.329341 213257.68394797566 195161.6750874159 184818.02087146498 1.0038208945839944 1.051842478119271 1.203795592977127 0.9028456673136316 0.9437654901312905 0.9922099531062808 0.931188033123081 1.1538792750967155 1.0559666972256163 1.0 17.495745909515147 -10.180138065884426 4.667720324256347 0.999996067649241 1.0263961392618302 0.0076890538718036305 0.090597965719676 3.8765949197004685e-06 6.808876228809001e-07 0.09172178581227224 0.022242487121210054 6.604834413625901e-11 10.180138065884426 0.02640007161258917 VDSPLPSDKAPT(ph)PPGK ddPTM_KYSE-520_SHP099_60min_R1 1 VDSPLPSDKAPTPPGK 16 1 Q12893 Q12893 TMEM115 Transmembrane protein 115 1 VDSPLPSDKAPT(1)PPGK 111.57 0.00059857 932100000.0 1133300.0 1444700.0 929150.0 1102500.0 971980.0 1268100.0 1062400.0 1715400.0 1635700.0 1193400.0 True False 1070433.589822461 1375294.4434610894 989044.4956925635 1207281.2685212882 1048469.2961903061 1260185.3175221903 1169797.760024815 1709449.6777773714 1338698.112641475 1182827.4044511495 0.9049786856427788 1.1627177712366645 0.8361697505237424 1.0206740763513893 0.8864093715150372 1.0654008461250828 0.9889843231757212 1.4452232602529047 1.1317780663550419 1.0 20.173808143501887 -7.067410039383463 23.320402251345612 1.2165225277967924 0.9828919085077836 0.3341252990687372 0.13559017427991948 91.43897834790971 31632.239351734755 0.05942257162398045 0.03430766976334728 8.562290543289298e-08 7.067410039383463 -0.23363061928900875 VDSPT(ph)VTTTLK ddPTM_KYSE-520_SHP099_60min_R1 2 VDSPTVTTTLK 11 0 H0YG16;Q07866-4;Q07866-6;Q07866-7;Q07866-9;G3V5R9;G3V3H3;F8W6L3;E7EVH7;G5E9S8;Q07866;G3V2E7;Q07866-8;Q07866-2;Q07866-3;Q07866-5;Q07866-10;H0YJL0;H0YJT3;H0YJU9 H0YG16 KLC1 Kinesin light chain 1 1 VDS(0.32)PT(0.675)VT(0.005)TTLK;VDS(0.324)PT(0.676)VTTTLK 232.17 3.3139000000000006e-11 4261520000.0 4320200.0 4482100.0 3354880.0 2750870.0 3122960.0 4304400.0 3506690.0 4204200.0 4605700.0 4187900.0 True False 4080549.8938948154 4266773.188230736 3571140.9327977933 3012311.857720776 3368719.1847882397 4277534.642963893 3861180.4471963593 4189616.61146766 3769420.9802487264 4150798.464136894 0.983075889892263 1.0279403408996775 0.8603503551551899 0.7257186499771793 0.811583413141867 1.0305329636989138 0.930225950635077 1.009351971112584 0.9081194890131892 1.0 21.98495745504822 -6.265655903588164 24.994149939791615 0.9733918135481671 0.8800008500956144 0.23220735102907486 0.08530571856865264 657.6513042624624 3898321.5665530628 0.03334067740004742 0.03044833208362014 5.424304939820019e-07 6.265655903588164 -0.09339096345255271 VDST(ph)TCLFPVEEK ddPTM_KYSE-520_SHP099_60min_R1 1 VDSTTCLFPVEEK 13 0 A0A6I8PRN4;A0A6I8PTT9;Q06210-2;Q06210 A0A6I8PRN4 GFPT1 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 1 VDS(0.052)T(0.93)T(0.018)CLFPVEEK 331.8 2.078e-50 13149000000.0 16086000.0 15060000.0 11963000.0 11042000.0 9552700.0 14411000.0 10198000.0 14363000.0 14087000.0 15062000.0 True False 15193677.513354018 14336494.99447915 12734154.121476771 12091428.360101653 10304443.142571993 14321055.603510981 11228913.362888804 14313178.105349407 11529155.9043715 14928562.398058692 1.0177589179872941 0.9603399585443985 0.853006055233605 0.8099526289064526 0.6902501974277162 0.9593057403419695 0.7521764697415881 0.9587780607200791 0.7722884224853929 1.0 23.83157190663971 -4.666572757367123 2.906931662106985 0.8402233502339229 1.009915289707648 0.26381878537333947 0.09470813948700749 0.3173234352372756 5.158696112683034 0.02376962599867591 0.08226908514611952 2.1549006027640626e-05 4.666572757367123 0.16969193947372507 VDT(ph)PY(ph)TR ddPTM_KYSE-520_SHP099_60min_R1 1 VDTPYTR 7 0 A0A0A0MSI1;Q1MX18-3;Q1MX18-4;Q1MX18-6;Q1MX18-2;Q1MX18-5;Q1MX18 A0A0A0MSI1 INSC Protein inscuteable homolog 2 VDT(0.999)PY(0.999)T(0.002)R 79.906 0.020857 238950000.0 246180.0 213160.0 240190.0 163280.0 232690.0 261280.0 218980.0 204410.0 261560.0 248230.0 True False 232523.90465233667 202919.47364031698 255673.03171758776 178798.08210807783 251001.37917500577 259649.25460310534 241116.6354388495 203700.94941965246 214067.29739102794 246030.8753200175 0.9451005055763345 0.8247723923933342 1.0391908388938116 0.7267302604825976 1.0202027645860423 1.0553523181404534 0.9800259220523605 0.8279487245440003 0.8700830621871589 1.0 17.908479850472805 -3.897690324128479 20.095886397676683 0.9250659683128337 3.2271924264829583 0.0022884912451959227 0.1046596716362501 7195.5890149511215 1555554.3818384407 0.025459290980725354 76435.45696096489 0.0001265638495707298 3.897690324128479 2.3021264581701244 VDTFPQPLAAPQCHTLLAPEMEDNEMS(ph)CSP ddPTM_KYSE-520_SHP099_60min_R1 1 VDTFPQPLAAPQCHTLLAPEMEDNEMSCSP 30 0 B7Z4K4;Q9UET6-2;Q9UET6 B7Z4K4 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase 1 VDTFPQPLAAPQCHTLLAPEMEDNEMS(0.5)CS(0.5)P 154.88 2.7904e-07 349010000.0 361700.0 271100.0 259370.0 230330.0 250430.0 345060.0 227880.0 243520.0 358250.0 316610.0 True False 341635.77996892616 258075.94907060405 276089.40520667314 252220.49394876036 270137.4162482133 342906.352546492 250916.33429447937 242675.2859579955 293200.8307475751 313805.0817188527 1.0886878507436275 0.8224084443024475 0.8798117726277928 0.8037489149864444 0.8608446197510513 1.0927367736310658 0.7995929604456908 0.7733312814080414 0.9343406076841753 1.0 18.25950918974864 -8.005112846899518 24.823682784349938 1.0000000248765686 0.8853219765016018 0.0902707464828727 0.10747638675355897 389.1575725945892 1889432.2124554608 0.10321769037732272 0.02665069306796941 9.882962627964807e-09 8.005112846899518 -0.11467804837496676 VDTFPQPLAAPQCHTLLAPEMEDNEMSCS(ph)P ddPTM_KYSE-520_SHP099_60min_R1 5 VDTFPQPLAAPQCHTLLAPEMEDNEMSCSP 30 0 B7Z4K4;Q9UET6-2;Q9UET6 B7Z4K4 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase 1 VDTFPQPLAAPQCHTLLAPEMEDNEMS(0.001)CS(0.999)P;VDTFPQPLAAPQCHTLLAPEMEDNEMS(0.187)CS(0.813)P;VDTFPQPLAAPQCHTLLAPEMEDNEMS(0.031)CS(0.969)P;VDTFPQPLAAPQCHTLLAPEMEDNEMS(0.142)CS(0.858)P;VDTFPQPLAAPQCHTLLAPEMEDNEMS(0.143)CS(0.857)P 188.44 1.8117000000000002e-15 1292449000.0 1040607.0 1113912.0 874298.0 813414.0 1040504.0 1049408.0 811535.0 898674.0 1213700.0 975692.0 True False 982882.4553113745 1060397.9955040007 930656.6480062609 890720.621998164 1122385.7451420801 1042858.2554138663 893572.8776183526 895556.7096460878 993322.6748871796 967048.1279568899 1.0163738772629014 1.096530736008283 0.9623684913929627 0.9210716573951855 1.1606306994393096 1.0783933345873307 0.9240211027616894 0.9260725332648707 1.0271698441584296 1.0 19.883228165831703 -6.761795648718871 24.999999074166976 0.9631552485752809 1.0384867256970303 0.1932859958268215 0.06950689393679875 16.573982382209092 1162883.2052140906 0.029452300193480278 0.021262577566609923 1.7306304919795508e-07 6.761795648718871 0.07533147712174937 VDTSVS(ph)WEALICVGSSK ddPTM_KYSE-520_SHP099_60min_R1 1 VDTSVSWEALICVGSSK 17 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VDTSVS(0.998)WEALICVGS(0.001)SK 105.46 0.00049234 48038000.0 45428.0 51257.0 54081.0 44827.0 40916.0 46609.0 35084.0 48267.0 57745.0 49556.0 True False 42908.01828152717 48794.53678167446 57567.14779265943 49087.34460227101 44135.85641980552 46318.095942269305 38630.63310684352 48099.5730426025 47259.96363299012 49116.972393984586 0.8735884194438288 0.9934353524536538 1.1720418622486135 0.9993967911646524 0.8985866650284594 0.9430161038985769 0.7865027346753697 0.9792861957528414 0.9621921166862903 1.0 15.583934014223297 -5.6630653433101665 5.667170932312556 0.9211511473605672 1.022408268050475 0.167831418747852 0.08713154309747101 0.3338829262392775 15.966065541009964 0.02687863712060129 0.03474039701690221 2.172374302025401e-06 5.6630653433101665 0.10125712068990766 VDVADQAQDKDRDDR ddPTM_KYSE-520_SHP099_60min_R1 8 VDVADQAQDKDRDDR 15 2 E7EX17;P23588-2;P23588;F8VP89;F8W0K0;F8VSC7 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ;;;;;;; 262.23 3.5172e-25 15151750000.0 15397860.0 15769520.0 9695380.0 8434450.0 14143120.0 15671130.0 10953810.0 14402430.0 13342460.0 14157640.0 False True 14543710.010927081 15011928.588667909 10320359.707956478 9236057.592090135 15256103.080654984 15573320.664759496 12061128.013683567 14352471.33188242 10919805.600045478 14032214.324077252 1.036451530388342 1.0698189353414884 0.7354762028005967 0.6582038571234189 1.0872199303910086 1.1098263114495 0.8595313423191102 1.0228229843422256 0.778195468501979 1.0 23.74223935259157 VDVEVPDVS(ph)LEGPEGK ddPTM_KYSE-520_SHP099_60min_R1 1 VDVEVPDVSLEGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDVEVPDVS(1)LEGPEGK 114.27 0.00019606 155080000.0 146610.0 167000.0 122180.0 120310.0 124580.0 159270.0 113980.0 164410.0 189580.0 160610.0 True False 138477.2510402109 158977.0693278895 130055.91829491209 131744.22622747952 134383.73723676242 158275.93685179343 125502.21073760184 163839.70008358234 155157.05092288987 159187.12035268912 0.8699023560034618 0.9986804772626439 0.8170002573497466 0.8276060647092043 0.844187249188419 0.9942760224641485 0.788394252371321 1.029227111594111 0.9746834453637306 1.0 17.28036408823933 -7.28225625452276 24.989179934551863 1.0014664730581821 0.8808419228767961 0.4167800180662534 0.06720341386415307 855.2584431251701 1026671.462697616 0.03639381057844119 0.01751449189482272 5.2208804117394536e-08 7.28225625452276 -0.12062455018138607 VDVGKDQEFTVK ddPTM_KYSE-520_SHP099_60min_R1 2 VDVGKDQEFTVK 12 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 160.84 4.0638e-06 683620000.0 1285420.0 1258410.0 894960.0 737690.0 1323020.0 1452400.0 1012310.0 1206070.0 1281710.0 1250370.0 False True 1214115.1901787578 1197954.0946880814 952650.5535866284 807799.8358054133 1427134.1470459253 1443335.0328595757 1114644.173993524 1201886.424668855 1048983.7732797596 1239292.6945731407 0.979683972555769 0.9666433925850763 0.768705050677925 0.6518232854456147 1.1515714998525706 1.1646441871076427 0.8994196277235779 0.9698164363688355 0.8464374702386745 1.0 20.24108553092679 -5.772237547708876 24.999972589438848 1.0064773592565155 0.8454225095544965 0.2854820946251293 0.12673443115450478 316.3973507195115 732522.7075176272 0.04295286121168363 0.04918068852441446 1.6895165575479273e-06 5.772237547708876 -0.161054849702019 VDVKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 9 VDVKSPK 7 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK;VDVKS(1)PK 91.855 0.0046308 68264650000.0 38627210.0 36294710.0 36762770.0 35858440.0 40274300.0 43500500.0 47250400.0 51131000.0 67818600.0 46479000.0 True False 36484481.65986589 34551057.652129635 39132556.976711735 39266415.35636686 43443658.2805791 43228997.2438088 52026931.55146509 50953638.495065086 55504451.80778087 46067232.220114864 0.7919833665182788 0.7500137513588935 0.8494662060384178 0.852371923903462 0.9430490217645373 0.9383892880139916 1.1293695983920642 1.106071192894819 1.2048575339315768 1.0 25.45723758574241 -6.212966506252143 0.9234525254547128 1.1289120677465077 0.7857304276798152 0.8264940384857351 0.060123288803739454 0.20780854785636296 0.3810207996682655 0.0345210910843413 0.0333915336201896 6.123976193580505e-07 6.212966506252143 -0.3431816400666925 VDVS(ph)CEPLEGVEK ddPTM_KYSE-520_SHP099_60min_R1 1 VDVSCEPLEGVEK 13 0 Q12888;Q12888-2;A6NNK5;Q12888-3;C9JXV0;H7C3N7 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 1 VDVS(1)CEPLEGVEK 153.24 7.7359e-05 0.0 296000.0 264030.0 275920.0 222870.0 275070.0 257590.0 262990.0 303940.0 359850.0 275730.0 True False 279580.2899386292 251345.6024828905 293706.24468760955 244051.4977916911 296716.44406579074 255982.2852618412 289575.595735058 302885.70308012946 294510.31108029274 273287.2467146936 1.0230272114765215 0.9197121545349325 1.0747162489958155 0.8930219054329892 1.0857310307478663 0.9366784888029611 1.0596015702019534 1.1083052967939482 1.077658451394022 1.0 18.06005861073127 -6.90109412674006 7.761250268063361 1.072481612934996 0.9897893003886536 0.22992539570419113 0.0641812451199816 0.29955516410764255 20.628058518227988 0.024796550444104653 0.016686208418053537 1.2557577677543208e-07 6.90109412674006 -0.08269231254634246 VDWLTEK ddPTM_KYSE-520_SHP099_60min_R1 2 VDWLTEK 7 0 P60842;P60842-2;J3KT12;J3QS69;J3KSZ0;J3QL43;Q14240-2;Q14240;E7EQG2;J3KTN0;J3QL52;I3L3H2;P38919 P60842;I3L3H2 EIF4A1;EIF4A2;EIF4A3 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed;Eukaryotic initiation factor 4A-III;Eukaryotic initiation factor 4A-III, N-terminally processed 0 ; 123.69 0.017809000000000002 901690000.0 1580740.0 1575980.0 1075940.0 973790.0 1495200.0 1573160.0 1213110.0 1233030.0 1236340.0 1398620.0 False True 1493053.2010729322 1500267.5552057931 1145296.8139648673 1066338.7088193605 1612863.7334757359 1563341.3249059264 1335742.9976126722 1228752.9067213642 1011851.8215951349 1386229.3149098929 1.077060761169939 1.0822650618258733 0.8261957827946478 0.7692368768645426 1.1634898469742538 1.1277653041174838 0.963580111346511 0.8863994531822718 0.7299310516030365 1.0 20.402734502209217 -7.254532730755413 3.7036863531145885 0.8515814760097171 1.0015038152858269 0.16659821653977014 0.13304486649165578 0.42457570809960204 12.996299699339813 0.08040276099784356 0.039385441338019155 5.565026916579161e-08 7.254532730755413 0.14992233927610976 VDY(ph)VVVDQQK ddPTM_KYSE-520_SHP099_60min_R1 1 VDYVVVDQQK 10 0 B7Z3B9;Q13480;Q13480-2 B7Z3B9 GAB1 GRB2-associated-binding protein 1 1 VDY(1)VVVDQQK 139.43 0.00070076 212010000.0 353830.0 329700.0 351410.0 449960.0 500670.0 705430.0 685420.0 831100.0 917180.0 703690.0 True False 334202.34455738205 313860.7171102105 374062.45087587956 492724.06311459345 540069.8805773787 701027.1497040287 754708.9426545631 828217.1080801977 750643.2322262679 697455.8540625356 0.4791734740065952 0.45000800449524797 0.5363241970040733 0.7064591403808256 0.7743427450376733 1.0051204612029436 1.0820884766520207 1.1874831980490306 1.076259132178656 1.0 19.41174237791536 -5.87608865130163 0.9898965431653264 1.1150108891079298 0.4556429257580893 0.9571504651077898 0.054123279160770234 0.09554727802925711 0.20235531473461155 0.02628036227192893 0.03593478862100649 1.3301828638055145e-06 5.87608865130163 -0.6593679633498405 down VEADRPGK ddPTM_KYSE-520_SHP099_60min_R1 1 VEADRPGK 8 1 P38159;P38159-2;H3BT71;H3BR27;P38159-3;O75526;H3BNC1;Q96E39;A0A1B0GUK8 P38159;Q96E39 RBMX;RBMXL2;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA-binding motif protein, X-linked-like-2;RNA binding motif protein, X-linked-like-1 0 78.516 0.014166 231430000.0 361530.0 307470.0 232060.0 204580.0 320300.0 338210.0 217420.0 308050.0 311760.0 308420.0 False True 341475.21020781295 292698.6796781212 247018.95890912795 224023.22169078016 345505.7877422936 336099.10593737056 239398.93541471692 306981.44644941087 255152.24283004605 305687.63874712883 1.1170723540126146 0.9575090470709141 0.8080763746991653 0.732850116573071 1.130257635403122 1.0994854332837407 0.783148891449787 1.0042324501821034 0.8346828935438678 1.0 18.221698688818112 -11.685255712084444 2.0157066680505924 2.4745955293906787 0.9387501828455809 0.015843770209211017 0.13909054641408192 6074703.165860408 350233.56702125643 41552537.26852982 0.03584588500018238 2.0641644203304973e-12 11.685255712084444 -1.5358453465450979 VEAENIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 VEAENISPK 9 0 A0A0X1KG75;A0A590PXD8;A0A0D9SG04;Q53SF7;Q53SF7-3;Q53SF7-2 A0A0X1KG75 COBLL1 Cordon-bleu protein-like 1 1 VEAENIS(1)PK;VEAENIS(1)PK;VEAENIS(1)PK 182.41 1.1465e-05 2624650000.0 4999500.0 4515800.0 3780000.0 3798000.0 4085400.0 4235400.0 3965000.0 4740200.0 5024700.0 4766900.0 True False 4722167.768743841 4298854.189646006 4023664.848213842 4158960.7780896574 4406897.73725372 4208965.297558139 4365820.894670918 4723757.352570992 4112341.142379175 4724668.974592081 0.9994706071765681 0.9098741547321123 0.8516289437105459 0.880265009137224 0.9327421161043781 0.8908487176969966 0.9240479953514318 0.9998070506048166 0.8703977282840702 1.0 22.171781822373436 -7.010553154833914 24.05401621950594 0.9534469421032491 0.9076623108271868 0.1445486002118358 0.04944625185503692 603.268431902038 1375038.34771533 0.021709834595707155 0.013580768545060682 9.759933198537302e-08 7.010553154833914 -0.04578463127606225 VEAFEHR ddPTM_KYSE-520_SHP099_60min_R1 1 VEAFEHR 7 0 P42285 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 0 107.59 0.0041716999999999995 0.0 111620.0 105220.0 71429.0 70967.0 115230.0 103360.0 69869.0 97034.0 91764.0 81412.0 False True 105428.2160910464 100165.0732615601 76033.42763044083 77711.68234299334 124297.94543098497 102714.89190055463 76932.04037572825 96697.41170190593 75101.97078219255 80690.75301757749 1.3065712259257285 1.241345129592983 0.9422817954602293 0.9630803956689412 1.5404236642073248 1.272945016118259 0.9534182976204169 1.1983704214638027 0.9307382565364399 1.0 16.300115732853556 -6.758357218049864 24.998157475642394 1.0371626107436371 1.2039578500003956 0.22093954209224187 0.1738103617992861 157.76793628820235 1279606.1397406352 0.07360049850397868 0.0545253591979565 1.744386761033754e-07 6.758357218049864 0.16679523925675843 VEAKEES(ph)EES(ph)DEDMGFGLFD ddPTM_KYSE-520_SHP099_60min_R1 17 VEAKEESEESDEDMGFGLFD 20 1 F8VWS0;Q8NHW5;P05388;P05388-2;F8W1K8 F8VWS0 RPLP0;RPLP0P6 60S acidic ribosomal protein P0-like;60S acidic ribosomal protein P0 2 VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD;VEAKEES(1)EES(1)DEDMGFGLFD 152.35 5.3201e-07 3229961000.0 3877037.0 4002453.0 3960362.0 3110162.0 3785251.0 3571256.0 2939309.0 3293722.0 5228485.0 3690331.0 True False 3661970.0289283525 3810169.1500755656 4215653.271323248 3405750.8613757007 4083128.718567923 3548966.4666138534 3236443.0386114223 3282296.8471424934 4279123.923380975 3657637.5383740733 1.0011845051645563 1.0417022217486582 1.1525617907993226 0.931134051869354 1.1163295093430698 0.9702892726192527 0.8848452053152636 0.8973816603494206 1.169914699990522 1.0 21.80248068446017 -6.313568042449114 23.72465950001664 0.9718448643421572 1.047451935387048 0.1005870909861073 0.09199798361835111 404.60515525514194 184141.17124789004 0.03205105792017345 0.02826641593819143 4.857714174528947e-07 6.313568042449114 0.07560707104489073 VEAPETNIDKT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 VEAPETNIDKTPK 13 1 O75152;E9PBY7;E9PQ61 O75152 ZC3H11A Zinc finger CCCH domain-containing protein 11A 1 VEAPET(0.008)NIDKT(0.992)PK;VEAPET(0.001)NIDKT(0.999)PK 100.04 0.0038707 1085650000.0 1929550.0 1873450.0 1727600.0 1371270.0 1501480.0 1795790.0 1489010.0 1634380.0 2025400.0 1983230.0 True False 1822514.0150374377 1783446.649894218 1838963.8602577355 1501595.0885126393 1619637.9337474215 1784581.808495524 1639533.6621371869 1628710.7172471606 1657638.4161790311 1965660.1251295928 0.9271765712382665 0.90730163729431 0.9355451823781059 0.7639138980924495 0.8239664187320488 0.9078791321454259 0.8340880710642157 0.8285820607668797 0.8432985921560299 1.0 20.90658246161372 -5.1610205952303785 23.345205487624604 0.8499431552013682 0.9217387158801965 0.19918588465432296 0.059270778389131216 34.01874247753297 7899.828609681295 0.015338950958051413 0.02656784674034921 6.902070718777027e-06 5.1610205952303785 0.07179556067882831 VEAPSLDVHMDS(ph)PDINIEGPDVK ddPTM_KYSE-520_SHP099_60min_R1 3 VEAPSLDVHMDSPDINIEGPDVK 23 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VEAPSLDVHMDS(1)PDINIEGPDVK;VEAPSLDVHMDS(1)PDINIEGPDVK;VEAPSLDVHMDS(1)PDINIEGPDVK 303.72 2.6883e-49 2672120000.0 2041050.0 2601260.0 1919680.0 2293750.0 1838680.0 2387530.0 1808520.0 2319040.0 3170290.0 2289100.0 True False 1927828.8877676984 2476291.565029139 2043425.6443965985 2511747.3103589173 1983373.6553418706 2372628.539660715 1991342.851054287 2310995.791508003 2594645.252507271 2268820.354892854 0.8497053914428323 1.0914445296159567 0.9006555499159826 1.1070719217333254 0.874187174433886 1.0457542548681706 0.8776996586617494 1.0185891476705924 1.1436098265390446 1.0 21.113510950319622 -7.525380390086603 24.97105756889607 1.074903142713968 0.9698199158388904 0.17786620926437458 0.09304340080221103 129.05135026430594 1288076.960833597 0.055940787947274716 0.02142386700512561 2.9827689251776736e-08 7.525380390086603 -0.10508322687507754 VEDMAELTCLNEASVLHNLK ddPTM_KYSE-520_SHP099_60min_R1 1 VEDMAELTCLNEASVLHNLK 20 0 P35579;Q5BKV1;B1AH99;E7ERA5;P35580;P35580-5;P35580-2;P35580-3;P35580-4 P35579;P35580 MYH9;MYH10 Myosin-9;Myosin-10 0 94.18799999999999 0.00011552 0.0 155450.0 137160.0 100220.0 166950.0 124380.0 101450.0 103290.0 91225.0 108250.0 98812.0 False True 146826.87861810782 130570.62771864257 106680.34155766951 182816.87780465238 134167.99837460663 100816.8129190332 113731.56121325587 90908.56176707504 88594.5287604326 97936.60255457264 1.4992033089599195 1.3332158183237515 1.0892795826588393 1.8666859277947936 1.3699474443157753 1.029408926686584 1.1612773799242413 0.9282388749029618 0.9046110080351786 1.0 16.57956052900959 -6.240898501651327 4.468693166241592 1.0068373547483214 1.4356076965297022 0.5591571716114331 0.190277795406863 0.16920000146940464 8.66159649440668 0.06810509230723587 0.06513481445553755 5.742506538333723e-07 6.240898501651327 0.42877034178138085 VEDQSIWPSMDDDEEESGAKVDSPLPSDKAPT(ph)PPGK ddPTM_KYSE-520_SHP099_60min_R1 1 VEDQSIWPSMDDDEEESGAKVDSPLPSDKAPTPPGK 36 2 Q12893 Q12893 TMEM115 Transmembrane protein 115 1 VEDQSIWPSMDDDEEESGAKVDS(0.043)PLPS(0.037)DKAPT(0.92)PPGK 79.042 0.005529999999999999 273300000.0 139080.0 189040.0 99771.0 106640.0 114020.0 132090.0 99786.0 130850.0 207660.0 111030.0 True False 131364.95515089357 179958.2346451751 106202.39829924422 116775.03353751481 122992.72531494331 131265.5773137025 109873.34269751146 130396.1118906197 169954.1786825998 110046.36058003294 1.1937237584095872 1.6352947402953655 0.9650696101122478 1.0611439844263486 1.1176446423732016 1.192820704127126 0.9984277727894904 1.1849198029205799 1.5443870909206303 1.0 16.747751908081003 -4.767950889851471 24.999886304078178 1.1338642165091002 1.4145092581790986 0.2701541905056706 0.1850432013621241 177.79681827788008 682631.3441163127 0.04756908652587076 0.10289039769960708 1.706275324212913e-05 4.767950889851471 0.2806450416699984 VEEAS(ph)PGRPSSVDTLLSPTALIDSILR ddPTM_KYSE-520_SHP099_60min_R1 1 VEEASPGRPSSVDTLLSPTALIDSILR 27 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 VEEAS(0.967)PGRPS(0.016)S(0.016)VDT(0.001)LLSPTALIDSILR 136.79 1.6803e-06 59490000.0 72477.0 86239.0 83462.0 71739.0 81235.0 89313.0 53449.0 91401.0 100440.0 82292.0 True False 68456.55633068246 82095.94899262201 88842.09406392154 78557.05299088324 87627.73233607635 88755.56443802471 58852.14653197125 91083.95126415383 82202.62788635433 81562.95690220727 0.8393093989071635 1.0065347323179294 1.089245626178583 0.9631462121349026 1.0743569834176152 1.0881847324937137 0.7215548426295294 1.1167318440080842 1.0078426654506165 1.0 16.3156264578812 -4.261838934270045 8.772760808343111 1.0080552207642817 0.8384599427036418 0.18338187690538377 0.1064818335507128 0.14339589612537215 201.9671041115865 0.026055582319812493 0.14671352372889626 5.472188709869646e-05 4.261838934270045 -0.1695952780606399 VEEEDDAEHVLALTMLCLTEGAK ddPTM_KYSE-520_SHP099_60min_R1 2 VEEEDDAEHVLALTMLCLTEGAK 23 0 O75607 O75607 NPM3 Nucleoplasmin-3 0 ; 146.89 1.0513e-06 132768000.0 99306.0 116035.0 75981.0 80302.0 93438.0 194946.0 148050.0 214329.0 241817.0 248872.0 False True 93797.298218397 110460.50442791423 80878.85683389843 87933.87793632328 100791.039010504 193729.26970245317 163016.33882875898 213585.54272376452 197909.1285104994 246667.18769948633 0.3802585138833702 0.4478119098778871 0.32788656484150147 0.3564879413286731 0.4086114572048283 0.7853872722563845 0.6608756533412995 0.8658855063608012 0.802332610008962 1.0 17.912206291851856 -6.264217833378723 3.4938389323266814 0.8115648975527787 0.3774923980250135 0.8738276768244613 0.08337941595005578 0.08333165592356649 2.195519965198396 0.029672215382110536 0.02760439130080589 5.442296097435633e-07 6.264217833378723 -0.4340724995277652 VEEEEEINSELT(ph)ARGR ddPTM_KYSE-520_SHP099_60min_R1 1 VEEEEEINSELTARGR 16 1 Q9Y2K3 Q9Y2K3 MYH15 Myosin-15 1 VEEEEEINS(0.054)ELT(0.946)ARGR 92.26899999999999 0.011114 236910000.0 265800.0 272040.0 237110.0 244930.0 249600.0 241560.0 244960.0 301400.0 373770.0 251960.0 True False 251055.54414083643 258970.7900596351 252394.48998941394 268208.0735591105 269242.099970267 240052.33443786774 269722.9473792157 300354.5137472889 305902.78997493687 249727.83042191403 1.0053166429896068 1.0370121328572195 1.0106782634638463 1.0740015364165627 1.0781421498572412 0.9612558361328828 1.0800676357277441 1.2027274382668576 1.2249447306618388 1.0 17.929997082944965 -7.041258528503355 5.954255760447102 1.158055420849897 1.03077642665322 0.3825628154315208 0.06444179073572823 0.1847496385695405 17.439151243509105 0.029095018403070695 0.01708373797407346 9.093717771184961e-08 7.041258528503355 -0.127278994196677 VEEEERDPQS(ph)PEFEIEEEEEMLSSVIPDSR ddPTM_KYSE-520_SHP099_60min_R1 10 VEEEERDPQSPEFEIEEEEEMLSSVIPDSR 30 1 A0A087WZP0;E9PLV2;Q8NCY6 A0A087WZP0 MSANTD4 Myb/SANT-like DNA-binding domain-containing protein 4 1 VEEEERDPQS(1)PEFEIEEEEEMLSSVIPDSR;VEEEERDPQS(1)PEFEIEEEEEMLSSVIPDSR;VEEEERDPQS(1)PEFEIEEEEEMLSSVIPDSR;VEEEERDPQS(1)PEFEIEEEEEMLSSVIPDSR;VEEEERDPQS(1)PEFEIEEEEEMLSSVIPDSR;VEEEERDPQS(1)PEFEIEEEEEMLSSVIPDSR;VEEEERDPQS(1)PEFEIEEEEEMLSSVIPDSR;VEEEERDPQS(1)PEFEIEEEEEMLSSVIPDSR;VEEEERDPQS(1)PEFEIEEEEEMLSSVIPDSR;VEEEERDPQS(1)PEFEIEEEEEMLSSVIPDSR 299.94 5.313699999999999e-53 1725573000.0 738838.0 834929.0 610990.0 638256.0 641286.0 737352.0 611104.0 756026.0 906141.0 751057.0 True False 697853.1833029616 794817.757586021 650375.3930185644 698915.6583413358 691751.5597817824 732749.912661164 672880.3561202979 753403.5222637949 741608.636355724 744403.2192935032 0.9374666379939609 1.0677247719862968 0.8736869698599926 0.93889392230821 0.9292699733866125 0.9843454376199513 0.9039191914818879 1.0120906287574007 0.9962458747284415 1.0 19.50572476901809 -7.292104108884339 24.47982196979287 1.003126206815765 0.9499939073620378 0.20889472265162334 0.04881937252518142 921.7174938032975 735806.1826555367 0.026397179176533368 0.012683174436809592 5.103826366058497e-08 7.292104108884339 -0.053132299453727105 VEEGGRHPS(ph)PCQFTIATPK ddPTM_KYSE-520_SHP099_60min_R1 1 VEEGGRHPSPCQFTIATPK 19 1 O14686-3;O14686 O14686-3 KMT2D Histone-lysine N-methyltransferase 2D 1 VEEGGRHPS(0.87)PCQFT(0.129)IAT(0.001)PK 53.496 0.039883999999999996 694350000.0 3051500.0 3805200.0 3243000.0 2625900.0 2525500.0 3962800.0 2798700.0 4071300.0 3938600.0 4320300.0 True False 2882227.2119855643 3622392.4802783583 3452048.968983465 2875464.7464943794 2724242.4818706345 3938066.6952739777 3081619.9086798285 4057177.610548559 3223449.5240262332 4282025.50314254 0.67309902985639 0.8459530373230886 0.8061719778291925 0.671519761940722 0.636204170169313 0.9196738067963084 0.7196640716918326 0.9474902957889981 0.7527861573128354 1.0 22.02986195756224 -8.386538053924712 0.406083753677958 1.0177630962841948 0.7387978697652395 0.3645590805093907 0.09640940234742568 2.2596996587350726 0.7814755847919963 0.1946068216818342 0.07175529571782666 4.1064065697858304e-09 8.386538053924712 -0.2789652265189553 VEEILNMLT(ph)ARLPGK ddPTM_KYSE-520_SHP099_60min_R1 1 VEEILNMLTARLPGK 15 1 S4R400;Q5VW36 S4R400 FOCAD Focadhesin 1 VEEILNMLT(1)ARLPGK 76.07300000000001 0.043965 302770000.0 478870.0 511690.0 448930.0 180360.0 495160.0 661920.0 301580.0 411280.0 512810.0 680220.0 True False 452306.1264963216 487107.6443376515 477868.7461133972 197501.36017278853 534126.2749249901 657788.7117532429 332066.6495371641 409853.3656734736 419696.63088810595 674193.7800031513 0.6708844547545476 0.7225039132449051 0.7088002890076552 0.2929445005735078 0.7922444418316846 0.9756671320079048 0.49253888034329235 0.6079162665540432 0.6225163199905882 1.0 19.3628037917619 VEELAR ddPTM_KYSE-520_SHP099_60min_R1 3 VEELAR 6 0 Q9BX97 Q9BX97 PLVAP Plasmalemma vesicle-associated protein 0 ;; 122.51 0.06009400000000001 4098830000.0 3308100.0 3815200.0 7250800.0 3392000.0 4713900.0 3269240.0 4941600.0 3309880.0 10443900.0 4294700.0 False True 3124593.0984661435 3631912.0652680495 7718198.169690183 3714374.6601580116 5084857.111577897 3248835.4604969937 5441145.153368432 3298398.7988118003 8547551.029294064 4256652.299226042 0.7340494075671313 0.8532320260051345 1.8132085092065262 0.8726046665435584 1.1945671748905689 0.7632372183858446 1.278268641852133 0.7748809550198699 2.008045390704852 1.0 22.021287819023502 -7.7423783624053115 24.999110668682988 1.5040236896808132 1.054242175422793 0.1892428042551917 0.38634632733737656 343.63176157634587 450686.9359177461 0.24937170786226906 0.09392044918140326 1.8097627192701608e-08 7.7423783624053115 -0.44978151425802015 VEELARSLRADIER ddPTM_KYSE-520_SHP099_60min_R1 2 VEELARSLRADIER 14 2 Q9BX97 Q9BX97 PLVAP Plasmalemma vesicle-associated protein 0 ; 96.59100000000001 0.0025006 102083000.0 343240.0 360610.0 250910.0 244560.0 342680.0 362560.0 282310.0 358640.0 326640.0 282270.0 False True 324199.79296802403 343285.7543133546 267084.0600701946 267802.90887035505 369646.9664175129 360297.12855519674 310848.6498800876 357395.96154720534 267330.40992432076 279769.30740273686 1.1588111504359129 1.2270315049934473 0.9546581880253168 0.9572276221309874 1.3212563231083612 1.2878365103736613 1.1110891783158008 1.2774666558856023 0.9555387344169605 1.0 18.093878172155037 -7.782336575575901 24.99549160136792 0.9777691296977923 1.158174365626619 0.26867859635155567 0.12140191376199581 408.1508023984946 488182.38399527303 0.1245349900859815 0.0322973624484333 1.650682033875025e-08 7.782336575575901 0.18040523592882673 VEELDRK ddPTM_KYSE-520_SHP099_60min_R1 1 VEELDRK 7 1 Q9UQE7 Q9UQE7 SMC3 Structural maintenance of chromosomes protein 3 0 77.282 0.045813 212490000.0 249970.0 249410.0 157940.0 146730.0 246890.0 258580.0 180410.0 196100.0 224230.0 203310.0 False True 236103.66579715934 237427.96922795745 168121.0651129351 160675.17508401698 266318.83838805783 256966.1063046195 198647.60343192448 195419.77487008402 183515.4843783079 201508.8315727866 1.171678997661583 1.1782509350822004 0.8343111505373818 0.7973604622186488 1.3216236544543771 1.2752101448804305 0.9858009789519888 0.9697826807134099 0.9107069052307052 1.0 17.620483543895023 -6.976003188143592 24.821509235228056 0.959705072705284 1.0886609846120618 0.13608646980027916 0.16051991672732283 506.2321906363043 523628.52756555466 0.07499246156096627 0.05055727453443963 1.0568097511744864e-07 6.976003188143592 0.1289559119067778 VEENPDADS(ph)DFDAKS(ph)S(ph)ADDEIEETR ddPTM_KYSE-520_SHP099_60min_R1 2 VEENPDADSDFDAKSSADDEIEETR 25 1 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 3 VEENPDADS(1)DFDAKS(1)S(1)ADDEIEETR;VEENPDADS(1)DFDAKS(1)S(1)ADDEIEETR 184.78 3.0465e-14 1161260000.0 2603900.0 2379000.0 2080340.0 2338800.0 2341000.0 2413600.0 2153940.0 2364100.0 2779600.0 2486300.0 True False 2459456.476254042 2264709.2690482 2214442.0450616893 2561078.848814142 2525223.381532032 2398535.82712054 2371681.2756286194 2355899.4888850884 2274894.7080138433 2464273.3163121287 0.9980453304322203 0.9190170806367439 0.8986186842195245 1.0392836021317984 1.0247334842350675 0.9733237832198066 0.9624262292373978 0.956021993701078 0.9231503230405882 1.0 21.23273084573865 -3.8856061792613135 19.512204066745326 0.9665057459798111 6.380471537445441 0.04621579296457501 0.04327297915732465 1765.7517978679898 301161.41760551516 0.011230318102284927 34.45579674826627 0.00013013491140226915 3.8856061792613135 5.41396579146563 VEEPSQCLASGTAISELIIEDNNAS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 3 VEEPSQCLASGTAISELIIEDNNASPQK 28 0 Q5UIP0;Q5UIP0-2;H7C2B5 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 VEEPSQCLASGTAISELIIEDNNAS(1)PQK;VEEPSQCLASGTAISELIIEDNNAS(1)PQK;VEEPSQCLASGTAISELIIEDNNAS(1)PQK 125.42 8.3821e-10 54484000.0 200329.0 243747.0 181906.0 163553.0 186569.0 208572.0 178318.0 192988.0 262759.0 211222.0 True False 189216.3510240391 232037.02824829414 193631.95181989073 179097.02794599734 201250.91886759916 207270.2247821448 196344.12365597225 192318.569671738 215048.58921535822 209350.73740822918 0.903824621620852 1.1083649913103826 0.9249165024067377 0.8554879250162956 0.9613098160488656 0.990062071660978 0.9378716601943735 0.9186429054545012 1.0272167744793674 1.0 17.67556247421229 -7.773545995390231 24.967053670685548 1.013608421109743 0.9526484803283364 0.13789635099367614 0.06329340292839057 544.1084121491205 1122060.246285476 0.06054542061410617 0.016113265094004747 1.6844340217834048e-08 7.773545995390231 -0.06095994078140654 VEESSEIS(ph)PEPK ddPTM_KYSE-520_SHP099_60min_R1 1 VEESSEISPEPK 12 0 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 VEESS(0.002)EIS(0.998)PEPK 147.73 6.7853e-05 0.0 336890.0 267540.0 188560.0 190860.0 225670.0 274410.0 223120.0 309130.0 304930.0 280060.0 True False 318202.04012643476 254686.97681427293 200714.87930666737 208999.27701584852 243428.94511334223 272697.30540277896 245675.14704135578 308057.70018148416 249562.39865975743 277578.8862833829 1.1463481404762872 0.9175300766725485 0.7230913056613235 0.7529365068583754 0.8769721226737085 0.9824137168861602 0.8850642436490783 1.1098023495453655 0.8990683765658488 1.0 18.08253830959828 -6.242918434539565 6.71136249638236 0.9766280612272056 0.8688057179215459 0.12018183856401055 0.12117248053986697 0.35952414171629127 75.77875214671353 0.043204527444749605 0.0418491962553899 5.715859769618422e-07 6.242918434539565 -0.10782234330565965 VEETVKHDWDR ddPTM_KYSE-520_SHP099_60min_R1 11 VEETVKHDWDR 11 1 Q16881;A0A087WSW9;Q16881-6;Q16881-3;Q16881-4;Q16881-2;Q16881-5;A0A087WSY9;E9PIR7;F8W809;A0A182DWI3;Q16881-7;E2QRB9;E9PKD3;A0A0B4J225 Q16881 TXNRD1 Thioredoxin reductase 1, cytoplasmic 0 ;;;;;;;;;; 231.67 3.817e-11 36922700000.0 11633870.0 12887910.0 8807250.0 6061540.0 10169060.0 9885400.0 6618840.0 7767540.0 10596080.0 8006160.0 False True 10988516.039555127 12268755.458452694 9374979.427098231 6637626.939131547 10969307.167963307 9823701.551797047 7287936.94085338 7740596.216697469 8672098.977439685 7935231.651098226 1.3847757094821964 1.54611182103987 1.181437397079737 0.8364755095981233 1.38235500238297 1.2379854783996709 0.9184277487154062 0.9754719908682414 1.09286021615254 1.0 22.919840909210397 -4.892183249938563 4.991265823418828 1.0723211812665694 1.4609849114406552 0.5181543669622279 0.1524888184699444 0.1648571480094627 6.513215084497454 0.041951014381355574 0.0914906198322171 1.2817896192290469e-05 4.892183249938563 0.38866373017408584 VEFATLQEALAHALTEK ddPTM_KYSE-520_SHP099_60min_R1 1 VEFATLQEALAHALTEK 17 0 A0A087WY61;Q14980-2;Q14980;Q14980-4;Q14980-3 A0A087WY61 NUMA1 Nuclear mitotic apparatus protein 1 0 195.27 3.2596e-12 29410000.0 109520.0 106850.0 85360.0 82731.0 119140.0 105110.0 74338.0 81518.0 84843.0 53279.0 False True 103444.70727729259 101716.76561488026 90862.44218082905 90593.72936601778 128515.64018612828 104453.96950142513 81852.81050896517 81235.23308444423 69437.64991798051 52806.98951043478 1.9589207458389895 1.9261989096117815 1.7206518118756688 1.7155632276313775 2.4336861725611776 1.9780330306613065 1.5500374338285439 1.538342439846755 1.3149329390242834 1.0 15.688441276267152 -7.5312191697833475 1.0648372187184942 1.0437280695393647 1.9453107221548143 0.7061356763469646 0.20424097239442432 0.2988843082193271 0.6269628701739255 0.20459940563991105 0.07306484746656633 2.942936085464391e-08 7.5312191697833475 0.9015826526154496 VEFEELCADLFER ddPTM_KYSE-520_SHP099_60min_R1 2 VEFEELCADLFER 13 0 A0A494C039;Q9Y4L1;E9PJ21;A0A087WWI4;K7EQK2;A0A087X054;Q9Y4L1-2 A0A494C039 HYOU1 Hypoxia up-regulated protein 1 0 ; 147.91 5.7011999999999996e-05 31962000.0 33760.0 40913.0 46670.0 33932.0 40467.0 45476.0 37695.0 32837.0 52736.0 43122.0 False True 31887.26550110849 38947.47806833499 49678.42287464019 37156.887077972184 43651.52267426602 45192.16741553429 41505.57846774792 32723.096111213406 43160.471766375755 42739.97262840834 0.7460759457743245 0.9112658636203113 1.16234100818352 0.8693708674318337 1.021327810707389 1.0573747392972366 0.9711185083951143 0.7656321260595069 1.0098385448587752 1.0 15.38329836361474 -4.337753883835131 4.005085892930642 0.9764631451793137 0.7403040249306962 0.32949815175823804 0.10088372625380877 0.25306292949410114 6.94401203232073 0.025732149189451266 0.14172122218516686 4.594583156679831e-05 4.337753883835131 -0.2361591202486174 VEFMDDTSR ddPTM_KYSE-520_SHP099_60min_R1 2 VEFMDDTSR 9 0 P62857 P62857 RPS28 40S ribosomal protein S28 0 ; 167.23 0.0007723 705080000.0 539430.0 733410.0 598310.0 348250.0 652920.0 697260.0 507610.0 572690.0 574330.0 622620.0 False True 509506.7425729553 698175.8827291458 636878.019929847 381347.57529481966 704301.0893933767 692908.1417045363 558924.1725961935 570703.4720568507 470046.1496811013 617104.0711910302 0.8256415187629395 1.1313746178689836 1.032043134475928 0.6179631493255374 1.141300345068302 1.1228383899124208 0.9057210909619383 0.9248091184285578 0.7616967244664219 1.0 19.235154286874867 -6.973622392589076 24.9616000153617 0.8890046102721634 0.9818635145727944 0.056665180044395025 0.16025093060461149 655.651566911584 620453.3635589281 0.06847853560142061 0.046166745371861495 1.0626190744559526e-07 6.973622392589076 0.09285890430063104 VEGDNIY(ph)VR ddPTM_KYSE-520_SHP099_60min_R1 1 VEGDNIYVR 9 0 O43491;H0Y5B0;E9PMV8;Q6ZSX4;E9PPC9 O43491 EPB41L2 Band 4.1-like protein 2 1 VEGDNIY(1)VR 89.08 0.017112 230400000.0 1104500.0 1066600.0 1007500.0 1109900.0 1119100.0 1029300.0 968180.0 1222100.0 1436400.0 1038000.0 True False 1043231.1832338359 1015358.9350007613 1072445.0620569969 1215384.5622963973 1207166.8031920108 1022875.756900552 1066053.0829262289 1217860.8203402855 1175585.968697326 1028804.1275517805 1.014023131610472 0.9869312416319572 1.0424190896366907 1.1813566156549329 1.1733689347307301 0.9942376099663051 1.0362060710847736 1.183763544221385 1.1426722902977058 1.0 19.972536905192232 -5.018632011401348 11.505839952840526 1.1056317371242528 1.0039839420566574 0.2674556456240069 0.06824765593244231 1.011223710072609 624.925841713299 0.019321927230195848 0.03514691446526159 9.580054695307983e-06 5.018632011401348 -0.10164779506759536 VEGNFNPFAS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 3 VEGNFNPFASPQK 13 0 Q5TH58;Q9H6K1-2;Q9H6K1 Q5TH58 C6orf106 Uncharacterized protein C6orf106 1 VEGNFNPFAS(1)PQK;VEGNFNPFAS(1)PQK;VEGNFNPFAS(1)PQK 148.7 7.0854e-06 1133750000.0 2124080.0 2051490.0 1818870.0 1483190.0 1626240.0 2121410.0 1580020.0 1798470.0 2227160.0 2097440.0 True False 2006253.048151499 1952933.34105073 1936117.2704948948 1624151.931662664 1754215.8359601262 2108169.493292916 1739743.8411091946 1792231.5273360556 1822763.886134735 2078858.313383626 0.9650744522776292 0.9394258995323563 0.9313368102242616 0.781271105012989 0.8438361694332598 1.0140996525451424 0.8368746585126928 0.8621229815412258 0.8768100617535294 1.0 20.987360002583205 -5.0194548369336935 24.48733852300665 0.8813302021761209 0.9480330101248924 0.13047907448934992 0.0677185430610988 1049.179414833853 1320581.7584204017 0.018312391669421002 0.03235394987916792 9.561921259931382e-06 5.0194548369336935 0.06670280794877148 VEHHDHAVVSGR ddPTM_KYSE-520_SHP099_60min_R1 2 VEHHDHAVVSGR 12 0 O95831-3;O95831;E9PMA0;O95831-5;O95831-2 O95831-3 AIFM1 Apoptosis-inducing factor 1, mitochondrial 0 ; 139.89 4.057e-05 324297000.0 56980.0 113320.0 73687.0 159943.0 92745.0 121029.0 110940.0 79770.0 94371.0 57458.0 False True 53819.205813186054 107875.93710321227 78436.98192336851 175143.93463138354 100043.50385313475 120273.61311757208 122154.89787006115 79493.29648845803 77235.6052993145 56948.9668216476 0.9450427078288652 1.8942562635255074 1.3773205433035676 3.0754541198244767 1.7567220168620503 2.111954260632053 2.144988832767152 1.3958689845491774 1.3562248730727717 1.0 15.79738204808852 -7.42377050244536 4.056387891754266 1.2246585140940087 1.9268809015418509 0.2460379388476488 0.526382989011352 0.34313220216331997 9.825406179978637 0.3269829418977236 0.1412027783090416 3.76902916059355e-08 7.42377050244536 0.7022223874478422 VEHPNGTGVLGPHS(ph)PPAQPTPGPPDNTLQETGTFPSS ddPTM_KYSE-520_SHP099_60min_R1 1 VEHPNGTGVLGPHSPPAQPTPGPPDNTLQETGTFPSS 37 0 H7C100;F2Z2W7;Q8IZ69 H7C100 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A 1 VEHPNGT(0.029)GVLGPHS(0.928)PPAQPT(0.042)PGPPDNTLQETGTFPSS 84.073 0.0035718000000000004 673500000.0 42206.0 56556.0 38211.0 26438.0 32230.0 49574.0 39814.0 36878.0 43250.0 42552.0 True False 39864.7490444249 53838.96486771333 40674.14219976164 28950.65957112544 34766.317636385036 49264.59027745839 43838.78766719499 36750.07882538992 35396.89024377564 42175.022384955075 0.9452217637386646 1.2765604337158356 0.9644130553981914 0.6864408821618763 0.8243343019252809 1.168098734549394 1.0394490669632324 0.8713707011214209 0.8392856302644817 1.0 15.36410121379211 -4.979630665522916 24.378744115128047 0.9169632517248104 1.1132902244761782 0.21550010506649364 0.1448116896905221 268.94675042895693 321879.5627564518 0.03996783663522432 0.08318359018501084 1.0480194301234796e-05 4.979630665522916 0.1963269727513678 VEHS(ph)PGPPPVDK ddPTM_KYSE-520_SHP099_60min_R1 2 VEHSPGPPPVDK 12 0 Q9H869-7;Q9H869-5;Q9H869-6;Q9H869-4;Q9H869-3;Q9H869-2;Q9H869;Q9H869-8;Q9H869-9 Q9H869-7 YY1AP1 YY1-associated protein 1 1 VEHS(1)PGPPPVDK;VEHS(1)PGPPPVDK 124.51 0.00028405 626660000.0 509450.0 491430.0 464720.0 425730.0 479200.0 513160.0 422840.0 487730.0 597600.0 481110.0 True False 481189.79293660354 467820.96514853183 494676.5947782899 466191.2511996076 516910.3137249676 509957.1780929628 465584.79372072 486038.17846703785 489090.9042700653 476847.73969791626 1.009105743568037 0.9810699017780751 1.0373889893903414 0.9776522197524528 1.0840154428590372 1.0694339841393008 0.9763804144603236 1.019273319351254 1.02567520731021 1.0 18.863169153143062 -5.006192948360427 1.6292475596331697 1.0263684840002323 0.9970079310578556 0.06589760480967455 0.0342620672714948 1.120949897412207 5.6391669099725945 0.010856437569086625 0.033022166940829226 9.858413986869941e-06 5.006192948360427 -0.029360552942376716 VEILANDQGNR ddPTM_KYSE-520_SHP099_60min_R1 3 VEILANDQGNR 11 0 P17066;P48741 P17066 HSPA6;HSPA7 Heat shock 70 kDa protein 6;Putative heat shock 70 kDa protein 7 0 ;; 149.33 0.00044980000000000004 981200000.0 805260.0 1101530.0 765920.0 542960.0 905670.0 978220.0 778740.0 942840.0 947690.0 990430.0 False True 760590.6225539872 1048610.845369762 815292.4287153293 594562.7551531234 976941.0764425965 972114.5661277144 857462.6389699961 939569.5081005102 775613.3853207804 981655.560742881 0.7748039668602295 1.0682064945225918 0.8305279991470182 0.6056734958065944 0.9951974149703622 0.9902807104683985 0.8734862545077418 0.9571274749256026 0.7901074636951322 1.0 19.904857380874233 VEKPDTK ddPTM_KYSE-520_SHP099_60min_R1 2 VEKPDTK 7 1 Q02878;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 Q02878 RPL6 60S ribosomal protein L6 0 ; 72.547 0.027375999999999998 1424950000.0 2266500.0 2023720.0 1211200.0 1237310.0 2215800.0 2389700.0 1573400.0 1902690.0 1945910.0 2639500.0 False True 2140772.7268442637 1926497.453534353 1289275.8899885209 1354903.5703891832 2390170.853822589 2374784.9958857964 1732454.6269042196 1896090.0124811833 1592581.7963992024 2616116.083499928 0.8183018866579751 0.73639601303816 0.4928205969605463 0.5179065175795058 0.9136333318301908 0.907752148638882 0.6622239119399027 0.7247728892612939 0.6087580770760727 1.0 21.31899512750498 -5.75988501664469 24.999997813830984 0.7873084927994165 0.6375351354514035 0.22971612089769533 0.14312333735106364 73.89285206024545 1188457.7593137694 0.045837598044459194 0.056057655307670144 1.738260988002228e-06 5.75988501664469 -0.149773357348013 VEKPGGQDKGSQEDDPAATQRPPS(ph)NGGAK ddPTM_KYSE-520_SHP099_60min_R1 1 VEKPGGQDKGSQEDDPAATQRPPSNGGAK 29 3 Q9UGU0;Q9UGU0-2 Q9UGU0 TCF20 Transcription factor 20 1 VEKPGGQDKGSQEDDPAAT(0.006)QRPPS(0.994)NGGAK 100.59 0.0029052 752950000.0 390560.0 420770.0 392660.0 325580.0 387350.0 313730.0 254320.0 332400.0 496970.0 351420.0 True False 368894.85823794245 400555.5776113533 417971.4918782139 356523.02531080355 417832.2412799796 311771.89469776535 280029.1475240126 331246.9819827434 406732.77559420053 348306.6922006228 1.0591093036635109 1.1500082731130397 1.2000099373269133 1.0235893633230801 1.199610144267083 0.8951073915002081 0.8039729175307297 0.9510210093578877 1.1677432122375777 1.0 18.4099986668903 -6.26502165322466 24.996902446065697 0.9505329675614441 1.126143814116244 0.3942649854668192 0.10030624652438253 325.5256841867032 2271491.1913089813 0.035875801026337195 0.03290192804340032 5.432232465794897e-07 6.26502165322466 0.17561084655479997 VELPS(ph)EEQVSGSQGPSEEKPAPLATEVFDEK ddPTM_KYSE-520_SHP099_60min_R1 2 VELPSEEQVSGSQGPSEEKPAPLATEVFDEK 31 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VELPS(0.992)EEQVS(0.008)GSQGPSEEKPAPLATEVFDEK;VELPS(1)EEQVSGSQGPSEEKPAPLATEVFDEK 260.61 2.0399e-41 771690000.0 469440.0 528010.0 347160.0 402710.0 387460.0 574250.0 472580.0 539700.0 497340.0 578390.0 True False 443399.22739456093 502643.60704083205 369538.4890756394 440983.43732082314 417950.89765416586 570665.8927427785 520352.9983363394 537827.9066669266 407035.59292114194 573265.9145806112 0.7734616974723539 0.8768070702556163 0.644619677669107 0.7692476145968612 0.7290698557578286 0.995464544861812 0.9076991760743673 0.9381822518793739 0.7100292945533319 1.0 19.128844975822165 -6.246650968429228 24.93390480681914 0.9062504543074907 0.7594606665536681 0.40465274445633304 0.09189486862574994 836.9086832208039 1411065.2412673668 0.03005604250750481 0.029931889253438072 5.66694544251717e-07 6.246650968429228 -0.14678978775382268 VELQHIS(ph)QK ddPTM_KYSE-520_SHP099_60min_R1 2 VELQHISQK 9 0 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 VELQHIS(1)QK;VELQHIS(1)QK 128.08 0.0006167000000000001 1146440000.0 1302740.0 1097060.0 1047200.0 1141230.0 1167680.0 1063890.0 1098090.0 1149470.0 1226200.0 1091380.0 True False 1230474.415252195 1044355.5908793679 1114704.187579241 1249692.1560766895 1259569.7728096219 1057249.8678800412 1209095.6535256468 1145482.7568583149 1003552.9899865367 1081711.2222807924 1.1375257923808304 0.965466170053538 1.0305007146259266 1.1552918471546487 1.164423320074108 0.977386428191829 1.1177619577397595 1.058954306162286 0.9277457507286845 1.0 20.04488397256519 -7.671642392636369 6.194811622854501 0.9650231991131081 1.0753029239225715 0.3038851935535486 0.06810638140005862 0.25352702648193876 13.824684031932103 0.04901405902600059 0.017767206249620738 2.129892122844101e-08 7.671642392636369 0.11027972480946346 VELS(ph)ES(ph)EEDKGGK ddPTM_KYSE-520_SHP099_60min_R1 2 VELSESEEDKGGK 13 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 VELS(1)ES(1)EEDKGGK;VELS(1)ES(1)EEDKGGK 115.1 0.0011382999999999999 295330000.0 1292410.0 1027520.0 908970.0 1076250.0 1120610.0 1098290.0 1099560.0 1323810.0 1281080.0 1037620.0 True False 1220717.4409445387 978156.3968610363 967563.6606034227 1178536.4764136376 1208795.6316012861 1091435.164720009 1210714.2554714645 1319218.0120895768 1048468.1653987542 1028427.4940561458 1.1869747240323147 0.9511184818709593 0.940818546952032 1.145959713470376 1.1753824538799167 1.0612660309336532 1.1772480437063917 1.282752571001914 1.0194867129267104 1.0 19.972008654239108 -5.285673627354984 23.905422916533997 1.136789003810774 1.0187853690488975 0.15207512927930156 0.10081464727402861 645.9108342875852 637144.846740515 0.027860626027783827 0.04135148753281598 5.179959600889632e-06 5.285673627354984 -0.11800363476187647 VELS(ph)PGPPKPAGR ddPTM_KYSE-520_SHP099_60min_R1 10 VELSPGPPKPAGR 13 1 A0A087WXE2;Q8IZ73-2;Q8IZ73 A0A087WXE2 RPUSD2 RNA pseudouridylate synthase domain-containing protein 2 1 VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR;VELS(1)PGPPKPAGR 147.51 5.1047000000000004e-06 54178220000.0 28984310.0 24833340.0 23294780.0 20978150.0 22085760.0 22945680.0 21768590.0 24259370.0 27822080.0 22822120.0 True False 27376492.545510493 23640309.07079671 24796398.791765843 22971907.068689242 23823783.661215268 22802467.499852188 23969171.518165044 24175219.90764951 22770291.609561738 22619933.772140674 1.2102817285534286 1.0451095617226236 1.0962188944295568 1.0155603150784671 1.0532207521561043 1.0080695960275678 1.0596481740227786 1.0687573248965196 1.0066471387111773 1.0 24.43109136954528 -1.2689632861994953 1.122719710436509 1.0370217498181582 199.9954438564491 0.7455302520687517 0.02993984056489498 873.238025379855 1.2303776305927312 0.008449260678065453 447296.1188961516 0.053831528796377544 1.2689632861994953 198.95842210663093 VEMY(ph)S(ph)GSDDDDDFNKLPK ddPTM_KYSE-520_SHP099_60min_R1 1 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 2 VEMY(0.573)S(0.853)GS(0.573)DDDDDFNKLPK 62.617 0.027275999999999998 136240000.0 470350.0 443730.0 412000.0 420280.0 435900.0 433650.0 433600.0 477380.0 535930.0 468690.0 True False 444258.74788052024 422412.5447476914 438558.1792233076 460223.2848382109 470202.85006826726 430943.4294957003 477432.5195281996 475724.08020133007 438618.6216958765 464537.77123530215 0.9563458030530956 0.9093179734866531 0.9440743172661515 0.9907123022835836 1.0121950876414214 0.9276822169911662 1.0277582342951526 1.0240805154256483 0.9442044304158492 1.0 18.825436380320156 -5.198327293247521 4.135344401119153 0.9906154185885689 0.9318804016799612 0.3650771491160165 0.03210598104996014 0.2315457597161918 7.970558665512284 0.008835851376183838 0.015713235500116395 6.3339219397075975e-06 5.198327293247521 -0.05873501690860772 VEMYS(ph)GS(ph)DDDDDFNKLPK ddPTM_KYSE-520_SHP099_60min_R1 21 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 2 VEMY(0.515)S(0.575)GS(0.91)DDDDDFNKLPK;VEMY(0.16)S(0.92)GS(0.92)DDDDDFNKLPK;VEMY(0.618)S(0.691)GS(0.691)DDDDDFNKLPK;VEMY(0.006)S(0.995)GS(0.999)DDDDDFNKLPK;VEMY(0.051)S(0.957)GS(0.992)DDDDDFNKLPK;VEMY(0.011)S(0.989)GS(1)DDDDDFNKLPK;VEMY(0.085)S(0.925)GS(0.99)DDDDDFNKLPK;VEMY(0.272)S(0.769)GS(0.96)DDDDDFNKLPK;VEMY(0.005)S(0.995)GS(1)DDDDDFNKLPK;VEMY(0.002)S(0.998)GS(1)DDDDDFNKLPK;VEMY(0.005)S(0.996)GS(0.999)DDDDDFNKLPK;VEMY(0.301)S(0.781)GS(0.919)DDDDDFNKLPK;VEMY(0.009)S(0.993)GS(0.998)DDDDDFNKLPK;VEMY(0.004)S(0.996)GS(1)DDDDDFNKLPK;VEMY(0.001)S(0.999)GS(1)DDDDDFNKLPK;VEMY(0.041)S(0.966)GS(0.993)DDDDDFNKLPK;VEMY(0.135)S(0.867)GS(0.998)DDDDDFNKLPK;VEMY(0.017)S(0.991)GS(0.991)DDDDDFNKLPK;VEMY(0.01)S(0.992)GS(0.998)DDDDDFNKLPK;VEMY(0.002)S(0.998)GS(1)DDDDDFNKLPK;VEMY(0.045)S(0.964)GS(0.992)DDDDDFNKLPK 209.75 2.7345999999999997e-18 141054330000.0 56254500.0 49281580.0 50765590.0 48130770.0 48716180.0 44601550.0 45063170.0 50501440.0 61148840.0 49753140.0 True False 53133950.744434424 46914018.92364038 54038021.15921583 52705103.90975638 52549866.20885225 44323175.18234507 49618594.99775735 50326262.29176468 50045752.092813805 49312365.88695719 1.0774974955823002 0.9513641878628427 1.095831039279106 1.0688009581729792 1.0656529100493097 0.8988247549093618 1.0062099861828198 1.0205606927708908 1.014872257549715 1.0 25.55544613569789 VEMYS(ph)GSDDDDDFNKLPK ddPTM_KYSE-520_SHP099_60min_R1 2 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 VEMYS(0.557)GS(0.443)DDDDDFNKLPK;VEMYS(0.945)GS(0.055)DDDDDFNKLPK 176.73 5.5628999999999995e-09 324480000.0 358220.0 305350.0 208018.0 306360.0 321670.0 315460.0 307780.0 336210.0 442720.0 320640.0 True False 338348.82250613376 290680.5276603061 221427.17312056795 335476.3622895077 346983.59894806053 313491.0971260546 338893.4060433335 335043.7659820036 362333.208062991 317799.379054145 1.0646616853473703 0.9146667577685273 0.6967514341267556 1.0556230892834784 1.091832211821104 0.9864433909817161 1.0663752932808426 1.0542618647625506 1.1401318943460192 1.0 18.277756780254833 -5.448004746791652 24.999952032979117 1.057805385150914 0.8912729177606004 0.40047256369598216 0.09214392023960724 130.96092373089454 43726.35297329022 0.026146500681255944 0.038781518001764874 3.5644723747525188e-06 5.448004746791652 -0.16653246739031358 VEMYSGS(ph)DDDDDFNKLPK ddPTM_KYSE-520_SHP099_60min_R1 5 VEMYSGSDDDDDFNKLPK 18 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 VEMYS(0.437)GS(0.563)DDDDDFNKLPK;VEMYS(0.02)GS(0.98)DDDDDFNKLPK;VEMYSGS(1)DDDDDFNKLPK;VEMYS(0.029)GS(0.971)DDDDDFNKLPK;VEMYS(0.024)GS(0.976)DDDDDFNKLPK 247.55 4.9286000000000006e-24 4542810000.0 3948350.0 3569470.0 3028870.0 3392220.0 3616380.0 3701370.0 3233140.0 3678960.0 4947400.0 3395660.0 True False 3729327.154659415 3397987.303316296 3224115.8065633485 3714615.568891869 3900968.531612476 3678268.376876512 3559977.343605632 3666198.5464357184 4049076.873804752 3365577.0941835027 1.10807955078627 1.0096299113720515 0.9579681927760229 1.1037083581628795 1.1590786431112374 1.0929086673525954 1.057761341957698 1.0893224085615982 1.203085462164125 1.0 21.682422473723594 -5.34492042314372 12.240614846791772 1.1049064744722634 1.0236838186221189 0.23904603902216426 0.06150476004037401 1.2888171500846832 186.28173467428937 0.017167049085449974 0.02546483953832303 4.519387466473776e-06 5.34492042314372 -0.08122265585014454 VENS(ph)PQVDGS(ph)PPGLEGLLGGIGEK ddPTM_KYSE-520_SHP099_60min_R1 1 VENSPQVDGSPPGLEGLLGGIGEK 24 0 E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2;Q8WVB6-3 E7EXA6 CHTF18 Chromosome transmission fidelity protein 18 homolog 2 VENS(1)PQVDGS(1)PPGLEGLLGGIGEK 120.98 0.00012004 21638000.0 25488.0 31410.0 29075.0 28731.0 26937.0 30041.0 24912.0 27125.0 34561.0 25260.0 True False 24074.12983093166 29901.016452628803 30949.22102164483 31461.585601709856 29056.788649435446 29853.502975856863 27430.348077690305 27030.90970602258 28285.593611910517 25036.21605198263 0.9615722192581582 1.1943105296161929 1.2361780613086677 1.2566429981426206 1.1605902660811407 1.1924127397635536 1.0956267520913203 1.0796723294725679 1.1297870873610139 1.0 14.611728910847178 -6.837587773210812 5.203751710294413 1.0806515372360093 1.1750717496011034 0.22752758509230442 0.08115332862714204 0.3290271918827471 15.78900595895484 0.035283486599925834 0.02372707638221851 1.4534905977865287e-07 6.837587773210812 0.09442021236509412 VENSPQVDGS(ph)PPGLEGLLGGIGEK ddPTM_KYSE-520_SHP099_60min_R1 8 VENSPQVDGSPPGLEGLLGGIGEK 24 0 E7EXA6;A0A0D9SF58;Q8WVB6;Q8WVB6-2;Q8WVB6-3 E7EXA6 CHTF18 Chromosome transmission fidelity protein 18 homolog 1 VENS(0.003)PQVDGS(0.997)PPGLEGLLGGIGEK;VENSPQVDGS(1)PPGLEGLLGGIGEK;VENSPQVDGS(1)PPGLEGLLGGIGEK;VENS(0.002)PQVDGS(0.998)PPGLEGLLGGIGEK;VENS(0.011)PQVDGS(0.989)PPGLEGLLGGIGEK;VENSPQVDGS(1)PPGLEGLLGGIGEK;VENSPQVDGS(1)PPGLEGLLGGIGEK;VENSPQVDGS(1)PPGLEGLLGGIGEK 318.32 4.098399999999999e-61 2155470000.0 813519.0 986318.0 710735.0 630085.0 650680.0 954651.0 662617.0 833517.0 1011364.0 886657.0 True False 768391.4793600801 938933.8027864984 756550.1153162081 689968.0889580374 701884.8141372327 948692.668999192 729600.792878729 830625.7240713304 827725.792011697 878801.9087887086 0.8743625516462383 1.0684248559276257 0.8608881111318869 0.7851235665942634 0.7986837615142092 1.0795295953633246 0.830222130359696 0.9451796995027223 0.9418798294971706 1.0 19.745178477785863 -6.228885578471794 24.99932425743321 0.9478648485279729 0.8820491949864381 0.1575187889283881 0.09247901203386326 1674.8315016790264 1286168.5258247335 0.03213256152214519 0.03213006745632193 5.903565981654386e-07 6.228885578471794 -0.06581565354153485 VEPS(ph)SQSPGRSPR ddPTM_KYSE-520_SHP099_60min_R1 1 VEPSSQSPGRSPR 13 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VEPS(0.689)S(0.124)QS(0.023)PGRS(0.164)PR 168.93 3.7387e-06 488410000.0 411310.0 397360.0 382100.0 339880.0 345890.0 351490.0 359300.0 344380.0 471270.0 344810.0 True False 388493.81437384285 378270.2291504798 406730.7773816165 372182.093011352 373109.5751551107 349296.2205314044 395621.5504300786 343185.42615889665 385699.24774992216 341755.2516581204 1.1367603350320363 1.1068454027120191 1.1901229766280088 1.0890310864444872 1.0917449646929083 1.0220654074420126 1.1576165940702035 1.0041847915835598 1.1285832357472059 1.0 18.382603981932853 -5.458785280572529 6.595427787486093 1.0715187834567328 1.1410991934270995 0.30570603559205656 0.05174584409984677 0.30483530503491757 25.65911249890829 0.013650736291088796 0.020178028015455825 3.4770802919394344e-06 5.458785280572529 0.06958040997036674 VEPSS(ph)QSPGRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 VEPSSQSPGRSPR 13 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 2 VEPS(0.066)S(0.914)QS(0.02)PGRS(1)PR;VEPS(0.002)S(0.963)QS(0.037)PGRS(0.999)PR;VEPS(0.075)S(0.874)QS(0.057)PGRS(0.994)PR;VEPS(0.163)S(0.783)QS(0.054)PGRS(0.999)PR 194.32 8.0367e-09 2863210000.0 2975980.0 2557080.0 2287240.0 2176060.0 2271910.0 2147700.0 1951100.0 2030590.0 2604360.0 2016640.0 True False 2810896.4569309507 2434234.0385446684 2434679.1501133945 2382872.088143705 2450696.391600361 2134295.407651134 2148336.228900992 2023546.3572332677 2131473.874572936 1998774.1385221803 1.4063101992150167 1.2178634852382326 1.218086177517539 1.1921667597247945 1.2260997100014088 1.0678021926124945 1.0748269089019695 1.0123937058388213 1.0663905608408908 1.0 20.930684026077166 -1.0000000000008105 0.20595029046025282 0.9709560836552236 2.953789924569846 0.8676593881238281 0.04354908526278742 18.05065330174901 0.22188836507912052 0.07896783943805566 11.658409813415332 0.09999999999981339 1.0000000000008105 1.9828338409146224 VEPSSQS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 1 VEPSSQSPGR 10 0 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VEPS(0.002)S(0.002)QS(0.996)PGR 106.26 0.0022214 737600000.0 1272200.0 1141500.0 1024000.0 937250.0 1010500.0 1041700.0 930750.0 1060200.0 1182200.0 1072900.0 True False 1201628.529932176 1086660.6265735696 1090008.6784579307 1026325.9582055114 1090020.601041485 1035198.3639010045 1024839.293244632 1056522.41365254 967542.2808367978 1063394.9407035694 1.1299927091407334 1.0218786877569748 1.025027143477618 0.9651409075977622 1.0250383552890514 0.9734843793935024 0.9637428710790855 0.9935371828584378 0.9098616551595091 1.0 20.020246076987682 -1.0000000000567117 0.6055248465245234 0.9715160909836994 11.015844985415264 0.7130624198645902 0.029351161308129134 90.88030267951144 0.6912809678585391 0.012497348565200805 1209.5564134004953 0.09999999998694163 1.0000000000567117 10.044328894431564 VEPSSQS(ph)PGRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 VEPSSQSPGRSPR 13 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 2 VEPS(0.166)S(0.166)QS(0.671)PGRS(0.997)PR;VEPS(0.243)S(0.243)QS(0.515)PGRS(1)PR;VEPS(0.023)S(0.258)QS(0.721)PGRS(0.999)PR;VEPS(0.181)S(0.304)QS(0.516)PGRS(0.998)PR 187.93 9.0425e-08 6948100000.0 6681930.0 5780750.0 5321870.0 5016810.0 5083960.0 4880050.0 4593650.0 4429300.0 5686760.0 4371740.0 True False 6311270.022802788 5503034.0929173445 5664926.2554930635 5493606.114041077 5484038.728224516 4849591.797787365 5058020.971703679 4413935.792106388 4654187.735553609 4333009.784762255 1.4565556821490253 1.2700257710632628 1.3073882905629968 1.2678499211703262 1.265641898042798 1.1192201353529723 1.167322767073143 1.018676626955407 1.0741235230810762 1.0 22.04693806381811 -5.923558155924333 0.3669480481975211 0.9814284140871289 1.4609740840843166 0.8770683603964871 0.047971969855871766 0.6449913675229254 0.15818746388496685 0.05055885674501266 0.12237985590892203 1.1924545748067766e-06 5.923558155924333 0.47954566999718773 VEPSSQSPGRS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 10 VEPSSQSPGRSPR 13 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2;K7EKH8;K7EIZ7 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VEPSSQSPGRS(1)PR;VEPSSQSPGRS(1)PR;VEPS(0.374)S(0.08)QS(0.018)PGRS(0.528)PR;VEPSSQSPGRS(1)PR;VEPSSQSPGRS(1)PR;VEPSSQSPGRS(1)PR;VEPSSQSPGRS(1)PR;VEPSSQSPGRS(1)PR;VEPSSQSPGRS(0.999)PR;VEPSSQSPGRS(1)PR 159.34 7.6515e-07 18739180000.0 9316150.0 8631270.0 8026670.0 8000740.0 8514450.0 9255150.0 8016560.0 8468290.0 12538330.0 8007680.0 True False 8799364.588215403 8216610.833399602 8544081.991326077 8761127.924089806 9184488.774406409 9197385.17582642 8826952.118886026 8438915.478503734 10261685.33757778 7936738.185080759 1.1086877736191656 1.0352629306640024 1.0765230995507682 1.1038700937065946 1.1572120133269779 1.1588369127654212 1.112163701642403 1.0632725033524417 1.29293484278811 1.0 22.920114784366977 -5.43993687682323 3.1888036013259553 1.1342719669687942 1.0697145669113997 0.10835823551891166 0.07259526348531885 0.5157759244553056 10.091477755760637 0.020528728138208042 0.031273002104930524 3.631308307247591e-06 5.43993687682323 -0.06455740005739452 VEQALSEVAS(ph)S(ph)LQSSAPK ddPTM_KYSE-520_SHP099_60min_R1 1 VEQALSEVASSLQSSAPK 18 0 Q86TV6;Q86TV6-2;H0YK02;H0YJS2;A0A0C4DGK5 Q86TV6 TTC7B Tetratricopeptide repeat protein 7B 2 VEQALS(0.004)EVAS(0.997)S(0.997)LQS(0.001)SAPK 112.74 4.3275e-05 0.0 172410.0 180660.0 183130.0 185760.0 192060.0 173800.0 174220.0 188840.0 225010.0 185870.0 True False 162846.0736091858 171980.82242381136 194934.85281836003 203414.57454921934 207174.02932808315 172715.2497321633 191831.85782334625 188184.9581155875 184153.85604050764 184223.33640467198 0.8839600714399827 0.9335452596843201 1.0581441885850917 1.1041737627766721 1.124580812460137 0.9375318735557499 1.04130052992831 1.0215044510007856 0.9996228471076448 1.0 17.491096300159256 -4.637586816478147 4.126623926197745 1.0387830475211328 0.8944983435904154 0.5071984637515374 0.05092086419729766 0.17242866740388738 5.140580206042024 0.014045462118176406 0.041898218214482745 2.3036324285388582e-05 4.637586816478147 -0.14428470393071746 VEQALSEVASS(ph)LQSSAPK ddPTM_KYSE-520_SHP099_60min_R1 2 VEQALSEVASSLQSSAPK 18 0 Q86TV6;Q86TV6-2;H0YK02;H0YJS2;A0A0C4DGK5 Q86TV6 TTC7B Tetratricopeptide repeat protein 7B 1 VEQALSEVAS(0.031)S(0.968)LQS(0.001)SAPK;VEQALSEVAS(0.017)S(0.983)LQSSAPK 185.55 2.198e-12 613500000.0 854300.0 1142110.0 719910.0 605350.0 816180.0 1074840.0 750290.0 994690.0 1118970.0 1025120.0 True False 806910.2759951705 1087241.3212579398 766316.5504967264 662882.2819948863 880408.7225710452 1068131.5248683458 826136.6353247527 991239.6525523919 915793.2549382095 1016038.2343312928 0.7941731410592434 1.0700791412377404 0.7542201903465561 0.652418638980809 0.8665114095341969 1.0512709943158176 0.8130960109670241 0.9755928655625621 0.9013373945921832 1.0 19.954523262223887 -6.008979927708209 24.8917304121593 0.9405757334544049 0.8222439279082941 0.22552890473127896 0.11422772444834105 731.1363789355328 2026663.9160492027 0.03780755099909479 0.04071201702626423 9.795352566795954e-07 6.008979927708209 -0.11833180554611078 VEQAT(ph)KPSFER ddPTM_KYSE-520_SHP099_60min_R1 1 VEQATKPSFER 11 1 Q96E39;A0A1B0GUK8 Q96E39 RBMXL1 RNA binding motif protein, X-linked-like-1 1 VEQAT(0.972)KPS(0.028)FER 135.02 0.0047195 0.0 975120.0 958370.0 840680.0 917740.0 1006400.0 920660.0 918300.0 969900.0 1127000.0 940180.0 True False 921028.1497464726 912328.466657303 894871.5779355589 1004961.7336714073 1085597.9543672963 914913.8194385131 1011130.7257443393 966535.6432763621 922365.2093580377 931850.7366489711 0.9883859222546546 0.9790500031562221 0.9603164356059931 1.0784578410973316 1.1649912498553316 0.9818244311622645 1.085077991546658 1.0372215262200912 0.989820765367376 1.0 19.82973935770474 -5.2572429349452605 24.677917864761223 1.0533873594254473 0.9762307049615528 0.287135652277542 0.0517404352159369 372.8344860261723 2192508.3664141116 0.014422724487950239 0.023858798979527352 5.530406636827606e-06 5.2572429349452605 -0.07715665446389441 VEQAT(ph)KPSFESGR ddPTM_KYSE-520_SHP099_60min_R1 1 VEQATKPSFESGR 13 1 P38159;P38159-2;H3BT71;H0Y6E7 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 VEQAT(0.666)KPS(0.334)FESGR 157.68 6.6159e-05 1115100000.0 2047600.0 1900700.0 1695100.0 1860400.0 1965500.0 1930900.0 1920900.0 2001100.0 2241900.0 2033200.0 True False 1934015.5462105959 1809387.5189911346 1804368.858255893 2037211.8566503436 2120173.667834775 1918848.5368690134 2115083.3181773936 1994158.651160249 1834827.4736998954 2015187.4298056639 0.9597199335434045 0.8978755485615669 0.8953851297245828 1.0109292200412363 1.0520975054113133 0.9521935818416946 1.049571512254502 0.9895648522145443 0.910499661997613 1.0 20.942482597395433 -5.264341357765392 24.898648163168673 0.9974165204721217 0.915681736598172 0.4068007563177851 0.0426955511818625 228.51488873905643 1960635.1699218608 0.0119837936501109 0.018685240691441733 5.440748390243402e-06 5.264341357765392 -0.08173478387394972 VEQATKPS(ph)FER ddPTM_KYSE-520_SHP099_60min_R1 8 VEQATKPSFER 11 1 Q96E39;A0A1B0GUK8 Q96E39 RBMXL1 RNA binding motif protein, X-linked-like-1 1 VEQAT(0.061)KPS(0.939)FER;VEQAT(0.001)KPS(0.999)FER;VEQAT(0.005)KPS(0.995)FER;VEQATKPS(1)FER;VEQAT(0.004)KPS(0.996)FER;VEQATKPS(1)FER;VEQATKPS(1)FER;VEQAT(0.183)KPS(0.817)FER 216.54 1.5624000000000001e-09 13237300000.0 13843540.0 11883770.0 11441150.0 11922870.0 12649750.0 12085750.0 11771450.0 12995320.0 14981230.0 11549550.0 True False 13075611.239787191 11312855.851297557 12178664.835487258 13056015.980058426 13645213.35776796 12010318.351268662 12961423.044280954 12950242.268050479 12261016.278075354 11447229.972413933 1.142251118506172 0.9882614290583663 1.063896232087236 1.1405393279877682 1.1920100662475401 1.0491899245679248 1.132275937105832 1.131299213806185 1.071090238216802 1.0 23.44849519803243 -5.134539026794693 6.974742498567295 1.1104563865343184 1.0559287694343387 0.05737511459399569 0.061654741833196886 0.5014575650298225 26.17437080207366 0.01607367035531016 0.028096479714818535 7.336027880641993e-06 5.134539026794693 -0.054527617099979775 VEQATKPS(ph)FESGR ddPTM_KYSE-520_SHP099_60min_R1 8 VEQATKPSFESGR 13 1 P38159;P38159-2;H3BT71;H0Y6E7 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 VEQAT(0.001)KPS(0.972)FES(0.028)GR;VEQATKPS(1)FESGR;VEQATKPS(0.641)FES(0.359)GR;VEQAT(0.004)KPS(0.959)FES(0.037)GR;VEQATKPS(1)FESGR;VEQATKPS(0.99)FES(0.01)GR;VEQATKPS(1)FESGR;VEQAT(0.017)KPS(0.977)FES(0.006)GR 218.36 1.5859000000000002e-11 28950180000.0 20883190.0 18862140.0 18302580.0 19402420.0 19577160.0 18436920.0 19931550.0 21016520.0 22985360.0 19903810.0 True False 19724757.82109284 17955974.481750637 19482393.591963414 21246420.16324969 21117771.113196786 18321848.343451783 21946425.587182395 20943618.59741266 18811798.037772704 19727477.728329875 0.9998621259506922 0.9102012294235036 0.9875765092861059 1.0769962818276824 1.0704749691781614 0.9287476379780918 1.1124800590024733 1.0616470532031743 0.9535835395093516 1.0 24.23370317519214 -5.005037770862772 24.14536358110007 1.0326812015815474 0.9534959584717103 0.21585408370695636 0.05722762899101609 191.6925279895013 918785.1630549434 0.014852464155636999 0.02955689002726118 9.88467123314435e-06 5.005037770862772 -0.0791852431098371 VEQATKPS(ph)FESGRR ddPTM_KYSE-520_SHP099_60min_R1 2 VEQATKPSFESGRR 14 2 P38159;P38159-2;H3BT71;H0Y6E7 P38159 RBMX RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed 1 VEQATKPS(1)FESGRR;VEQAT(0.001)KPS(0.998)FES(0.001)GRR 107.69 0.00025029 2368500000.0 3612100.0 3500600.0 3274200.0 2922150.0 3264800.0 3169500.0 3060300.0 3438300.0 3861200.0 3207500.0 True False 3411729.612457171 3332425.9214922762 3485260.1709052306 3199870.2574235653 3521721.185829041 3149717.974833667 3369664.989649788 3426373.339805253 3160103.4129310134 3179084.045397236 1.0731800618473002 1.0482346090588743 1.0963095410929085 1.0065384279652576 1.1077785725507585 0.9907627259474042 1.0599483818392534 1.0777863343267218 0.9940295279410107 1.0 21.600179726811394 VEQIAAIAQELNELDYYDSHNVNTR ddPTM_KYSE-520_SHP099_60min_R1 7 VEQIAAIAQELNELDYYDSHNVNTR 25 0 O43707;O43707-2 O43707 ACTN4 Alpha-actinin-4 0 ;;;;;; 382.95 1.0111999999999998e-99 3359702000.0 1284864.0 1060308.0 725991.0 1072776.0 1049077.0 972548.0 841227.0 873466.0 871993.0 684327.9 False True 1213590.0326071158 1009369.2121252449 772789.54148667 1174732.308498135 1131633.3914683813 966477.9671836372 926266.4347443477 870436.1503144972 713661.0523546962 678265.2872050495 1.7892557020100452 1.488162863655586 1.1393617749054057 1.7319658408863792 1.6684229796449423 1.4249261836268154 1.3656403360420297 1.283326991274067 1.0521857241073078 1.0 19.371490133753934 -7.413988891863742 1.0978353215715473 0.9932796730591072 1.539939172062409 0.5842747169500789 0.17126372560409261 0.3912925005305828 0.8389833086049595 0.1625730832625568 0.05976083365270853 3.8548821733717226e-08 7.413988891863742 0.5466594990033017 VEQMPQAS(ph)PGLAPR ddPTM_KYSE-520_SHP099_60min_R1 8 VEQMPQASPGLAPR 14 0 Q8N3F8;H0Y6J8 Q8N3F8 MICALL1 MICAL-like protein 1 1 VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR;VEQMPQAS(1)PGLAPR 238.51 2.2155000000000003e-18 10350140000.0 6020050.0 6804960.0 4922090.0 3916240.0 4102490.0 5739970.0 4046040.0 5407730.0 6457720.0 5688760.0 True False 5686105.825827849 6478039.507146794 5239375.797022446 4288438.272139508 4425332.623024922 5704144.718096237 4455053.208745099 5388971.846803671 5285160.833873636 5638362.012188312 1.0084676743948564 1.1489222389664537 0.92923721210107 0.7605822866409241 0.7848613858880977 1.011666988704472 0.7901325241470337 0.9557690398655602 0.9373574847533435 1.0 22.426844678736966 -4.898568665682549 5.875108059044721 0.8830900537981946 1.0761636258680622 0.39661654233672194 0.09046374349030845 0.1852798067302556 9.070898981206215 0.023633873532708335 0.05048716527803103 1.2630813840187564e-05 4.898568665682549 0.19307357206986764 VERPPS(ph)PFSMAPQASLPPVPPR ddPTM_KYSE-520_SHP099_60min_R1 11 VERPPSPFSMAPQASLPPVPPR 22 1 A0A1B0GW38;A0A0U1RQX8;P22681 A0A1B0GW38 CBL E3 ubiquitin-protein ligase CBL 1 VERPPS(0.999)PFS(0.001)MAPQASLPPVPPR;VERPPS(1)PFSMAPQASLPPVPPR;VERPPS(1)PFSMAPQASLPPVPPR;VERPPS(0.925)PFS(0.075)MAPQASLPPVPPR;VERPPS(1)PFSMAPQASLPPVPPR;VERPPS(0.999)PFS(0.001)MAPQASLPPVPPR;VERPPS(0.991)PFS(0.009)MAPQASLPPVPPR;VERPPS(1)PFSMAPQASLPPVPPR;VERPPS(0.999)PFS(0.001)MAPQASLPPVPPR;VERPPS(0.99)PFS(0.01)MAPQASLPPVPPR;VERPPS(0.999)PFS(0.001)MAPQASLPPVPPR 240.4 4.0948999999999996e-27 10062500000.0 2204270.0 2457087.0 2025771.0 1812426.0 1872333.0 2343776.0 1811102.0 2205876.0 2743507.0 2237434.0 True False 2081994.748996695 2339044.8523572204 2156355.4400082026 1984678.422114255 2019674.9549824952 2329147.624604436 1994185.8648121823 2198224.331011329 2245355.286983356 2217612.0754573117 0.9388453336985686 1.054758349417297 0.9723772087431131 0.8949619476188045 0.9107431265073724 1.0502953381168452 0.8992491910024187 0.9912573778522626 1.0125103988353432 1.0 21.080575587771854 -7.509251892601601 24.501628494910953 1.004798118549319 0.9620476438135566 0.11506694788356175 0.05309121264763279 1166.9664722286416 2098277.6237769527 0.03166371532181823 0.014150656644274966 3.095623304063015e-08 7.509251892601601 -0.042750474735762545 VES(ph)EES(ph)GDEEGKK ddPTM_KYSE-520_SHP099_60min_R1 5 VESEESGDEEGKK 13 1 H7C118;C9JRC4;B5MBZ8;C9JD73;Q15435-3;Q15435;H7C003 H7C118 PPP1R7 Protein phosphatase 1 regulatory subunit 7 2 VES(1)EES(1)GDEEGKK;VES(1)EES(1)GDEEGKK;VES(1)EES(1)GDEEGKK;VES(1)EES(1)GDEEGKK;VES(1)EES(1)GDEEGKK 222.16 4.4413999999999996e-13 3258590000.0 6294160.0 5329000.0 4648070.0 5414720.0 5368930.0 5080390.0 5528690.0 5794080.0 6121380.0 4932330.0 True False 5945010.397703105 5072986.841007921 4947692.0293749515 5929333.360805069 5791434.245967011 5048681.401535018 6087583.94001468 5773981.688828432 5009891.699432207 4888633.393494672 1.2160884073684393 1.0377106304920654 1.012080806869026 1.212881573139696 1.1846734618459425 1.0327388034973788 1.2452527015250228 1.1811034340418933 1.0248041315797773 1.0 22.220999788697984 -7.860738860544725 5.926163343212692 1.003085313657591 1.1362114169579673 0.2889601843678281 0.08029850688461224 0.284826226406569 13.53861022791324 0.07922350728636587 0.020634281643938112 1.3780378282061367e-08 7.860738860544725 0.13312610330037633 VES(ph)EESGDEEGKK ddPTM_KYSE-520_SHP099_60min_R1 1 VESEESGDEEGKK 13 1 H7C118;C9JRC4;B5MBZ8;C9JD73;Q15435-3;Q15435;H7C003 H7C118 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 VES(0.5)EES(0.5)GDEEGKK 134.06 0.00028928 0.0 138660.0 138670.0 119080.0 128940.0 150340.0 139870.0 120480.0 128720.0 151370.0 109410.0 True False 130968.25338814272 132008.08505208654 126756.08733473651 141194.41883277558 162170.90268241166 138997.01944785783 132659.29417148864 128273.50036347393 123885.02372717501 108440.7125196921 1.20774062015094 1.2173295617927147 1.1688975882717338 1.3020425221490097 1.4954798701913963 1.2817789206486163 1.2233347705770432 1.18289060799172 1.1424217053597683 1.0 16.726546972116896 -7.868513727001123 1.1330472572643968 1.005994028102766 1.2776070842741594 0.5093683961771438 0.08433506749759162 0.43073750887577017 1.21462902604248 0.08991754218066314 0.029274471630354487 1.3535873063651884e-08 7.868513727001123 0.2716130561713934 VES(ph)LESLYFT(ph)PIPAR ddPTM_KYSE-520_SHP099_60min_R1 4 VESLESLYFTPIPAR 15 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 2 VES(0.999)LES(0.001)LYFT(1)PIPAR;VES(1)LESLYFT(1)PIPAR;VES(1)LESLYFT(1)PIPAR;VES(1)LESLYFT(1)PIPAR 130.77 9.693299999999999e-05 254315000.0 628330.0 544272.0 561630.0 548730.0 524404.0 493311.0 604670.0 641320.0 668940.0 609630.0 True False 593475.2823551983 518124.3561510729 597833.5684397722 600881.13421831 565671.6113493907 490232.0630645763 665795.9446105089 639095.4106052137 547477.3586051154 604229.1524849631 0.9822023315400487 0.857496454813916 0.9894153004387686 0.9944590255983446 0.9361872213927448 0.8113346750126829 1.101893117656348 1.0577037006189773 0.9060757104379203 1.0 19.204736266465048 -6.777787560772021 24.99917375101722 1.0212267290904564 0.931401921068958 0.2637373372110793 0.07167392082998894 349.5668583722749 534542.8000047156 0.03033587764718834 0.020519702900700928 1.6680629616958074e-07 6.777787560772021 -0.08982480802149839 VES(ph)LESLYFTPIPAR ddPTM_KYSE-520_SHP099_60min_R1 9 VESLESLYFTPIPAR 15 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 VES(1)LESLYFTPIPAR;VES(1)LESLYFTPIPAR;VES(1)LESLYFTPIPAR;VES(1)LESLYFTPIPAR;VES(1)LESLYFTPIPAR;VES(1)LESLYFTPIPAR;VES(0.913)LES(0.087)LYFTPIPAR;VES(1)LESLYFTPIPAR;VES(0.992)LES(0.008)LYFTPIPAR 321.09 4.5281e-43 1761061000.0 865166.0 868081.0 685814.0 740222.0 706027.0 828649.0 712890.0 877913.0 932723.0 845051.0 True False 817173.5173143367 826377.0857438549 730022.6677811985 810572.4763241399 761587.3081558815 823477.0942192602 784955.8783359282 874867.7247094351 763364.0152334137 837564.5055797287 0.9756544264596335 0.9866429155469878 0.871601724903452 0.9677731934964149 0.9092879450863801 0.9831805057800082 0.9371885665004548 1.0445377268033662 0.9114092229887936 1.0 19.675840779278204 -6.7359280815226406 1.8598960176816806 0.9811707972329222 0.9434305599276647 0.0936621917252981 0.04620032889825666 0.7929268282277835 5.616415225417516 0.022894797321788955 0.01467797552468753 1.836842496367966e-07 6.7359280815226406 -0.03774023730525755 VES(ph)PPLEEWPSPAPSFK ddPTM_KYSE-520_SHP099_60min_R1 7 VESPPLEEWPSPAPSFK 17 0 A0A0D9SFF0;Q08050-2;Q08050;Q08050-3 A0A0D9SFF0 FOXM1 Forkhead box protein M1 1 VES(0.999)PPLEEWPS(0.001)PAPSFK;VES(1)PPLEEWPSPAPSFK;VES(1)PPLEEWPSPAPSFK;VES(1)PPLEEWPSPAPSFK;VES(1)PPLEEWPSPAPSFK;VES(1)PPLEEWPSPAPSFK;VES(1)PPLEEWPSPAPSFK 321.02 1.5107999999999997e-47 865687000.0 1151431.0 1197969.0 980184.0 922286.0 978254.0 1223403.0 1013732.0 1334271.0 1339544.0 1363256.0 True False 1087558.827109209 1140416.7710518702 1043368.2289898505 1009939.784144604 1055237.0242961294 1215767.2880786986 1116209.9236309072 1329642.7253221928 1096316.5767562576 1351178.612437119 0.8048964193916456 0.8440162984780392 0.7721911961794071 0.7474509845319243 0.7809752275406431 0.899782809532354 0.8261009413238127 0.9840614061555623 0.811377982647929 1.0 20.3657869665969 -6.6505236287636205 1.2840489533191835 0.9206520721460733 0.7903841422935038 0.4706350172276216 0.06014439524040968 0.40978052978460966 1.3743567475623508 0.03476936969309658 0.022218914348479474 2.2360235395461278e-07 6.6505236287636205 -0.1302679298525694 VES(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 VESPVK 6 0 Q15398-1;Q15398-3;Q15398 Q15398-1 DLGAP5 Disks large-associated protein 5 1 VES(1)PVK;VES(1)PVK 136.75 0.009923200000000002 339830000.0 1488900.0 1090520.0 985170.0 1002850.0 1105910.0 1309500.0 1467680.0 913910.0 1248260.0 1430660.0 True False 1406307.7489514332 1038129.7822961076 1048675.6345277335 1098160.5624821521 1192938.825232844 1301326.9247656376 1616047.417576449 910739.859518197 1021607.450073881 1417985.4654366376 0.9917645725080768 0.732115954359545 0.7395531619252648 0.7744512121243765 0.8412912926900169 0.9177293819192445 1.1396784078310862 0.6422772882497456 0.7204639786341528 1.0 20.43541131413718 -4.233076778697354 21.736564630697767 0.8305519790546281 0.9917659510907694 0.09974400323293564 0.14165856412223377 3921.730784133134 3005253.7302268567 0.03671864248893332 2.5079329680146256 5.846867085453926e-05 4.233076778697354 0.1612139720361413 VESEES(ph)GDEEGKK ddPTM_KYSE-520_SHP099_60min_R1 3 VESEESGDEEGKK 13 1 H7C118;C9JRC4;B5MBZ8;C9JD73;Q15435-3;Q15435;H7C003 H7C118 PPP1R7 Protein phosphatase 1 regulatory subunit 7 1 VESEES(1)GDEEGKK;VESEES(1)GDEEGKK;VES(0.007)EES(0.993)GDEEGKK 173.06 2.4441e-06 0.0 1189385.0 980291.0 862972.0 923836.0 1116420.0 1059022.0 1053887.0 1127989.0 1192251.0 1056465.0 True False 1123407.443069785 933196.3489132114 918600.5559240206 1011637.0956785786 1204275.902439124 1052412.250873735 1160424.182905941 1124076.2694336115 975768.2726018894 1047105.5420173325 1.0728693507871716 0.8912151750389307 0.8772759946951127 0.9661271525022959 1.1500998267271034 1.0050679789605341 1.108220839582504 1.0735080890394189 0.9318719397874582 1.0 19.99797543401033 -5.542132384367883 24.93902615466154 1.0504241156592538 0.9382249762160522 0.26680997382337435 0.07517763952089805 266.281495571113 344909.68514171557 0.021772747369383887 0.028112306699712 2.8699056260436083e-06 5.542132384367883 -0.11219913944320159 VESGYFS(ph)LEK ddPTM_KYSE-520_SHP099_60min_R1 10 VESGYFSLEK 10 0 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;A0A1W2PPU9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 VESGYFS(1)LEK;VESGYFS(1)LEK;VESGYFS(1)LEK;VESGYFS(1)LEK;VESGYFS(1)LEK;VESGYFS(1)LEK;VESGYFS(1)LEK;VESGYFS(1)LEK;VESGYFS(1)LEK;VESGYFS(1)LEK 213.84 4.7141000000000005e-09 8588560000.0 18900520.0 14523380.0 12567260.0 12071610.0 12290480.0 11888830.0 11119380.0 11813520.0 14963250.0 12383070.0 True False 17852070.478347488 13825655.024762172 13377365.687926942 13218892.184938105 13257670.852734657 11814627.402032444 12243435.445091031 11772541.656416303 12246300.99283644 12273365.63368267 1.4545374929069808 1.1264762606614964 1.08995088121668 1.0770388970292353 1.0801984759869525 0.9626232734082917 0.9975613707368499 0.9591942428658753 0.9977948476681934 1.0 23.549027586986387 -1.0000000000013778 0.6818716194736463 0.9960417459467525 50.161044092882385 0.9288066279343841 0.03683413074815074 65.74560337769329 0.3748167595618959 0.015740908988946117 4911.582323560307 0.09999999999968276 1.0000000000013778 49.16500234693563 VESLESLYFT(ph)PIPAR ddPTM_KYSE-520_SHP099_60min_R1 3 VESLESLYFTPIPAR 15 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 VESLESLYFT(1)PIPAR;VESLESLYFT(1)PIPAR;VESLESLYFT(1)PIPAR 397.46 1.5437999999999995e-81 875420000.0 409076.0 499907.0 460435.0 351163.0 334793.0 439866.0 374907.0 584450.0 543790.0 667130.0 True False 386383.738807211 475890.7173442946 490115.37682204717 384537.4259389946 361139.3043884037 437120.63313399215 412806.2582997202 582422.6793616549 445051.4438303522 661219.7472192855 0.5843499690263659 0.7197164321628635 0.7412291887578887 0.5815576857105985 0.5461713838813048 0.6610822422837085 0.6243102388211313 0.88083074017525 0.6730764555988924 1.0 19.334770285561167 -8.251331532224004 0.672063818131585 0.9988291349263091 0.6374984605345311 0.5997303015702662 0.0857746458867223 0.7603211802508739 0.7157922391485516 0.09195466652558207 0.0347833754166209 5.606198460134705e-09 8.251331532224004 -0.361330674391778 VET(ph)PVLPPVLVPR ddPTM_KYSE-520_SHP099_60min_R1 2 VETPVLPPVLVPR 13 0 K7EJX0;B7Z5N5;Q15796-2;Q15796;H0YMP2;H0YL71;H3BP09;H3BVD1;P84022-3;P84022-2;P84022;O15198-2;O15198 K7EJX0 SMAD2;SMAD3;SMAD9 Mothers against decapentaplegic homolog;Mothers against decapentaplegic homolog 2;Mothers against decapentaplegic homolog 3;Mothers against decapentaplegic homolog 9 1 VET(1)PVLPPVLVPR;VET(1)PVLPPVLVPR 133.98 7.7011e-05 206439000.0 219815.0 237540.0 201180.0 149076.0 189343.0 235320.0 177710.0 233018.0 285630.0 236600.0 True False 207621.42375966124 226128.2218451909 214148.3846993809 163244.13821866614 204243.21688569855 233851.28059247785 195674.6610824638 232209.71494480994 233766.79214634968 234503.90807201478 0.8853644507105695 0.9642833831824597 0.9131975089882817 0.6961254486579167 0.8709586913279784 0.9972169867662226 0.8344196166759543 0.9902168234803989 0.9968567008894421 1.0 17.839252440286778 -7.281831639396361 21.250924156963183 0.9951528125090365 0.8817877260597836 0.32538845243519887 0.07616499664810254 163.57887199688088 170461.46512529568 0.044224668758040854 0.021323842483539957 5.225987427761547e-08 7.281831639396361 -0.11336508644925292 VETGVLKPGMVVTFAPVNVTTEVK ddPTM_KYSE-520_SHP099_60min_R1 3 VETGVLKPGMVVTFAPVNVTTEVK 24 1 Q5VTE0;P68104;A0A087WVQ9 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1 0 ;; 184.38 1.3321e-16 633462000.0 482515.0 384817.0 391048.0 316538.0 352619.0 349464.0 265067.0 352009.0 435827.0 303157.0 False True 455748.9310801939 366329.8136979073 416255.5797789218 346621.6763493803 380368.1091723386 347282.86554891145 291862.5591646248 350787.96293851855 356691.8031046013 300471.264832577 1.5167804193660175 1.2191841835592057 1.385342388766726 1.1535934277859092 1.2659051087107456 1.1557939350453958 0.9713493212978318 1.167459268139927 1.1871078697104378 1.0 18.196867501760043 -1.0000000000001568 0.26184064753623687 1.052327039480429 3.8436552002135063 0.6424225639227821 0.09205293464027718 33.285593272152695 0.4603831809061822 0.11072160638154893 41.56551317772554 0.09999999999996391 1.0000000000001568 2.7913281607330775 VETVKS(ph)DNKDDDIDIDAI ddPTM_KYSE-520_SHP099_60min_R1 2 VETVKSDNKDDDIDIDAI 18 2 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 1 VET(0.204)VKS(0.796)DNKDDDIDIDAI;VET(0.148)VKS(0.852)DNKDDDIDIDAI 160.69 2.2381999999999998e-08 348000000.0 777460.0 764180.0 759620.0 619880.0 709810.0 708250.0 604380.0 692990.0 914720.0 653950.0 True False 734332.7439719142 727467.6457424344 808586.3206349735 678793.2088262824 765668.0087335552 703829.5490380017 665476.6285803817 690586.1794350826 748629.9062147144 648156.5117654015 1.1329558997591371 1.122364170593629 1.2475170826142052 1.0472674369612287 1.1813011129797717 1.0858944348502526 1.0267221211244257 1.065462071119388 1.1550140940120324 1.0 19.305982700329942 -6.433213250322875 5.896930323916467 1.0657689935123673 1.144710225444926 0.3114778665111557 0.05989908066398368 0.3041253934542728 16.04402704569856 0.020839676791341757 0.01820871289448813 3.687964650758557e-07 6.433213250322875 0.07894123193255864 VEVSPVLRPPIT(ph)TSPPVPQEPAPVPS(ph)PPRAPT(ph)PPSTPVPLPEK ddPTM_KYSE-520_SHP099_60min_R1 1 VEVSPVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEK 43 2 A0A669KBI7;Q9UMN6 A0A669KBI7 KMT2B Histone-lysine N-methyltransferase 2B 3 VEVS(0.011)PVLRPPIT(0.359)T(0.329)S(0.301)PPVPQEPAPVPS(1)PPRAPT(0.948)PPS(0.025)T(0.027)PVPLPEK 118.68 1.7085e-05 295180000.0 91083.0 73132.0 70351.0 80177.0 67959.0 70007.0 68765.0 83142.0 99562.0 77137.0 True False 86030.44442054107 69618.62894663001 74885.93802557985 87796.9979739059 73306.98666618345 69570.06034522183 75716.43728172663 82853.59980748857 81484.05055377548 76453.6261916778 1.1252631000765498 0.9105994367368306 0.9794949141827808 1.1483693102245929 0.9588425077758199 0.9099641679624444 0.9903576985596084 1.0837105306132284 1.065797066962996 1.0 16.22229730971217 -7.248883860751316 23.87330622080278 1.0560653490935767 0.9990747567065226 0.06701241483527653 0.07749917417517754 1011.2569138589743 1922830.324509693 0.03746690219533811 0.02143232727727355 5.637884042469449e-08 7.248883860751316 -0.05699059238705417 VEVSPVLRPPITTSPPVPQEPAPVPS(ph)PPRAPT(ph)PPSTPVPLPEK ddPTM_KYSE-520_SHP099_60min_R1 1 VEVSPVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTPVPLPEK 43 2 A0A669KBI7;Q9UMN6 A0A669KBI7 KMT2B Histone-lysine N-methyltransferase 2B 2 VEVSPVLRPPITT(0.001)SPPVPQEPAPVPS(0.998)PPRAPT(0.75)PPS(0.12)T(0.129)PVPLPEK 90.62899999999999 0.0012994999999999999 86213000.0 78844.0 64125.0 56781.0 63998.0 68902.0 64961.0 61902.0 78925.0 82422.0 56925.0 True False 74470.36614838272 61044.33874641265 60441.19411281219 70080.35067829958 74324.19540124745 64555.55430294055 68159.65826530114 78651.22759623354 67456.242489537 56420.68878697987 1.3199123893994034 1.0819495482745645 1.071259415868034 1.242103777621232 1.3173216598234645 1.1441823148716674 1.2080614350994996 1.394013956355382 1.1955940974812027 1.0 15.783936658083611 -5.304159586084105 24.820585385858124 1.2319754795744258 1.1501312663685268 0.031501611706194144 0.11694183255089428 1045.8720780337667 607652.5461743429 0.0321176181972416 0.04763832792964124 4.964098768912163e-06 5.304159586084105 -0.08184421320589896 VEVTEFEDIK ddPTM_KYSE-520_SHP099_60min_R1 1 VEVTEFEDIK 10 0 Q01105;A0A0C4DFV9;Q01105-3;Q01105-4;A0A087X027;P0DME0;Q01105-2 Q01105;Q01105-2 SET;SETSIP Protein SET;Protein SETSIP 0 127.76 0.0030101 151460000.0 388500.0 423940.0 341280.0 264570.0 371530.0 387780.0 287080.0 305050.0 373880.0 404170.0 False True 366949.1305444507 403573.28605308646 363279.4548673064 289714.6532541293 400767.29728346673 385359.72118031234 316100.8480308012 303991.8527492053 305992.8167478109 400589.3682395021 0.916023138999189 1.0074488192901825 0.9068624473580911 0.7232210243805481 1.0004441681633904 0.961981899005157 0.789089459413243 0.7588615096930291 0.7638565598797062 1.0 18.611764606541783 -6.769737753328904 24.9609258685469 0.8078569875590759 0.9175418628147778 0.16029774730380575 0.09819148663008033 291.67233774181807 877320.7786699191 0.041073936564119916 0.028215569827069943 1.699269438544891e-07 6.769737753328904 0.10968487525570192 VEYFLK ddPTM_KYSE-520_SHP099_60min_R1 1 VEYFLK 6 0 Q13185;S4R2Y4;C9JMM0;B8ZZ43 Q13185 CBX3 Chromobox protein homolog 3 0 118.03 0.06297699999999999 754270000.0 1950300.0 1836300.0 1323600.0 1090900.0 1880000.0 1911400.0 1482600.0 1487300.0 1399100.0 1483300.0 False True 1842112.9711733365 1748081.3916575077 1408921.3738348784 1194578.8080089558 2027945.3042632297 1899470.243602172 1632475.676781615 1482140.9034384289 1145058.7084408423 1470159.115989938 1.253002447924109 1.1890423102130885 0.9583461807031515 0.8125506926538227 1.3794053189254307 1.29201677760108 1.1104074783649391 1.0081499936423024 0.778867196065245 1.0 20.487540876376762 -7.438300533724783 3.271298599047714 0.8890289395974378 1.1388738390724467 0.2819691105612382 0.1620839162129711 0.361150497026066 7.27851563516415 0.11908720847022188 0.047365262878769666 3.6450162287695155e-08 7.438300533724783 0.24984489947500887 VFCVEEEDS(ph)ESSLQK ddPTM_KYSE-520_SHP099_60min_R1 2 VFCVEEEDSESSLQK 15 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VFCVEEEDS(0.999)ES(0.001)SLQK;VFCVEEEDS(1)ESSLQK 389.23 7.290499999999999e-82 357120000.0 441560.0 386900.0 338880.0 269210.0 339130.0 417500.0 378910.0 385430.0 412810.0 444590.0 True False 417065.7865719627 368312.74325125996 360724.74702717137 294795.63745906187 365817.6016142495 414894.2276362381 417213.9206052352 384093.0332900378 337854.11009324854 440651.2784857865 0.9464758345990262 0.8358372282883099 0.8186172709329987 0.6689998460280666 0.8301748331953364 0.9415477677993864 0.9468120052639146 0.8716485167361814 0.7667153746931571 1.0 18.749277865327876 -6.107633775895792 6.664955585569852 0.8993249181671761 0.8106925225432914 0.19978726693455662 0.08472118281955415 0.43913734865924803 23.682749829210316 0.029324672014600758 0.029408707677351893 7.80487989092134e-07 6.107633775895792 -0.0886323956238847 VFDAIMNFK ddPTM_KYSE-520_SHP099_60min_R1 2 VFDAIMNFK 9 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 105.81 0.011812000000000001 405310000.0 1039560.0 1379930.0 694230.0 527670.0 827390.0 832860.0 550290.0 643760.0 580260.0 602960.0 False True 981893.5344885176 1313636.0914828405 738981.1766072738 577819.5981502292 892500.8857948701 827661.8118062703 605918.6835128522 641526.9468147139 474899.41116423707 597618.243495781 1.6430113122800767 2.1981191266831104 1.2365438716940553 0.9668707480719813 1.4934297865041177 1.3849339788639055 1.013889201187229 1.0734728295141862 0.794653470393244 1.0 19.18886466439655 -3.852588653766916 0.35820670046329195 0.9413690466731218 2.9834024721919925 0.5324333186547254 0.26995783568757437 6.81138577951146 0.558099991786604 0.2553146412666852 6.369543332501217 0.0001404143022614509 3.852588653766916 2.042033425518871 VFDDES(ph)DEKEDEEYADEK ddPTM_KYSE-520_SHP099_60min_R1 6 VFDDESDEKEDEEYADEK 18 1 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(0.992)DEKEDEEY(0.008)ADEK;VFDDES(0.995)DEKEDEEY(0.005)ADEK;VFDDES(1)DEKEDEEYADEK;VFDDES(1)DEKEDEEYADEK;VFDDES(1)DEKEDEEYADEK;VFDDES(1)DEKEDEEYADEK 294.91 3.0981999999999994e-38 60474200000.0 21615420.0 18176491.0 16510887.0 17184248.0 18698862.0 19054612.0 20015426.0 20692248.0 21027580.0 18107637.0 True False 20416369.56332853 17303265.088890795 17575205.19437326 18817433.76328747 20170356.057428826 18935685.09855856 22038780.591813296 20620471.421295002 17209501.534155186 17947217.42370841 1.1375785494389985 0.9641196560104661 0.9792718714799924 1.0484875353674323 1.1238709367159967 1.0550763748782794 1.2279775784462221 1.148950889403903 0.9588952497684295 1.0 24.097256846967266 -5.574787618488898 5.519666405233248 1.0983948195049862 1.019513092472568 0.07991653279551614 0.08346782265093167 0.3677715861864426 24.45507569719892 0.024871520336083607 0.03263407512587565 2.6620265430702007e-06 5.574787618488898 -0.07888172703241825 VFDDES(ph)DEKEDEEYADEKGLEAADK ddPTM_KYSE-520_SHP099_60min_R1 6 VFDDESDEKEDEEYADEKGLEAADK 25 2 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(0.997)DEKEDEEY(0.003)ADEKGLEAADK;VFDDES(1)DEKEDEEYADEKGLEAADK;VFDDES(1)DEKEDEEYADEKGLEAADK;VFDDES(1)DEKEDEEYADEKGLEAADK;VFDDES(0.999)DEKEDEEY(0.001)ADEKGLEAADK;VFDDES(0.991)DEKEDEEY(0.009)ADEKGLEAADK 306.47 5.810699999999999e-61 7193880000.0 4829070.0 5196410.0 4476000.0 3729010.0 4166380.0 4199150.0 3605620.0 4032010.0 5945630.0 3980590.0 True False 4561191.860587617 4946766.663629568 4764530.121853212 4083413.989232263 4494250.402540549 4172941.5472544003 3970111.2570601185 4018023.8983882056 4866053.469135253 3945325.069452162 1.156100392310886 1.253829932020396 1.2076394309670413 1.0350006443953872 1.1391331065058752 1.0576927056187653 1.0062824196160338 1.0184265751633335 1.2333719993853234 1.0 21.911712743267785 -5.251047665623182 23.546286568427213 1.0704690495710356 1.2106539578512936 0.4396663883494826 0.07022602267379251 291.8828514193199 661364.9133856718 0.01878945054366809 0.03203838902727239 5.6098640206591236e-06 5.251047665623182 0.14018490828025798 VFDDES(ph)DEKEDEEYADEKGLEAADKK ddPTM_KYSE-520_SHP099_60min_R1 3 VFDDESDEKEDEEYADEKGLEAADKK 26 3 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VFDDES(1)DEKEDEEYADEKGLEAADKK;VFDDES(1)DEKEDEEYADEKGLEAADKK;VFDDES(1)DEKEDEEYADEKGLEAADKK 130.61 8.8519e-05 9799310000.0 6113530.0 5659580.0 5109760.0 4671410.0 4953880.0 4994070.0 4217640.0 4339520.0 6778130.0 4205820.0 True False 5774400.303880092 5387685.281597221 5439143.305505064 5115379.401889366 5343722.172278478 4962900.156673789 4644000.211399717 4324467.217971581 5547392.4547524415 4168559.7068784432 1.3852267233576836 1.2924572659249973 1.3048015832734892 1.2271335333037445 1.281910911210154 1.1905551331037967 1.1140539030151735 1.0374008103652392 1.330769581061492 1.0 21.991117568659742 -1.0000000000197584 0.10761043343298879 0.9242154597566434 2.2706374370266436 0.5731169280673384 0.0799139586006745 80.43396246734254 0.6077590425195634 0.7823662038431325 16.055046333306862 0.09999999999545045 1.0000000000197584 1.3464219772700001 VFDEHKEEDLFELSHR ddPTM_KYSE-520_SHP099_60min_R1 2 VFDEHKEEDLFELSHR 16 1 Q9NSV4-7;Q9NSV4-6;Q9NSV4-5;Q9NSV4-4;Q9NSV4;Q9NSV4-1;Q9NSV4-2 Q9NSV4-7 DIAPH3 Protein diaphanous homolog 3 0 ; 219.95 1.9247e-17 1798820000.0 1535980.0 1310680.0 1003850.0 941560.0 1479720.0 1324880.0 1118980.0 1195830.0 1103020.0 1019670.0 False True 1450776.1274997813 1247712.9654292113 1068559.7772167881 1031045.5793096625 1596165.545544888 1316610.9324807164 1232097.418592402 1191681.944838821 902739.3728714309 1010636.5170912566 1.4355073292575098 1.2345813201172382 1.057313642586597 1.0201942655675513 1.5793665858610177 1.3027541655333157 1.2191301202320877 1.1791400020539895 0.8932384270752776 1.0 19.946832783894617 -7.6327306090343665 3.8791484085474046 0.9476915515451284 1.2563838168043582 0.3900020230334702 0.15583520917147153 0.2558914574720585 6.935322004458279 0.12995523667248243 0.043064011288951584 2.329535810457519e-08 7.6327306090343665 0.30869226525922977 VFDKDGNGY(ph)ISAAELR ddPTM_KYSE-520_SHP099_60min_R1 2 VFDKDGNGYISAAELR 16 1 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2 P0DP25 CALM2;CALM1 1 VFDKDGNGY(0.977)IS(0.023)AAELR;VFDKDGNGY(0.954)IS(0.046)AAELR 94.339 0.0019027 546170000.0 1284650.0 1200480.0 1085530.0 1089640.0 1135870.0 1056560.0 1065490.0 1078180.0 1398580.0 1149780.0 True False 1213387.903613714 1142807.1388427848 1155505.0007094103 1193199.0579877873 1225256.5067837627 1049965.6171289678 1173200.127380308 1074440.045229103 1144633.1273327102 1139593.843715304 1.0647547021295118 1.002819684526379 1.0139621296498345 1.0470388766735694 1.0751694680880175 0.9213507276468516 1.029489702713241 0.942827175799944 1.0044219996845343 1.0 20.1200883024294 -6.248927714196531 24.997459300848405 0.9791616032507416 1.037503068726141 0.43071893908053605 0.03503853492655028 783.8035539283472 1565987.9947892728 0.011160669182806875 0.011080162664964704 5.637314778601292e-07 6.248927714196531 0.05834146547539942 VFDKDGNGYIS(ph)AAELR ddPTM_KYSE-520_SHP099_60min_R1 3 VFDKDGNGYISAAELR 16 1 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2 P0DP25 CALM2;CALM1 1 VFDKDGNGYIS(1)AAELR;VFDKDGNGYIS(1)AAELR;VFDKDGNGYIS(1)AAELR 169.9 3.8416e-08 463670000.0 1321330.0 1171780.0 1228780.0 1340920.0 1203650.0 1100550.0 1122590.0 1125770.0 1448230.0 1158340.0 True False 1248033.190893947 1115485.9299223612 1307989.1249175128 1468360.6336377012 1298370.4071683162 1093681.0592217054 1236072.3526226056 1121864.966626692 1185267.9389073574 1148078.0087748826 1.0870630578715872 0.9716116164551392 1.1392859325937892 1.2789728767687076 1.1309078279043172 0.9526191172225097 1.0766449171355716 0.9771678910772251 1.032393208343186 1.0 20.130789241868342 -6.244371595888178 24.404045549655706 1.0106430135740825 1.122966364994613 0.3567229726543105 0.07635095977332483 779.8631534372671 1115072.7209851358 0.02776442732862593 0.027690464933984797 5.696766306176563e-07 6.244371595888178 0.11232335142053063 VFDKDGNGYISAAELR ddPTM_KYSE-520_SHP099_60min_R1 4 VFDKDGNGYISAAELR 16 1 P0DP25;P0DP24;P0DP23;E7EMB3;Q96HY3;G3V361;A0A590UJI2 P0DP25 CALM2;CALM1 0 ;;; 210.39 1.0131e-17 10321870000.0 4143190.0 4039760.0 2708580.0 2748790.0 4075970.0 3677220.0 3005780.0 3243730.0 3157300.0 2923350.0 False True 3913358.9914554986 3845683.8657966154 2883179.4006812265 3010034.175146148 4396725.649903082 3654269.1059844997 3309633.575985868 3232478.257722274 2584013.909056015 2897451.393331887 1.3506211011724278 1.327264324311691 0.995074294366592 1.038855796536693 1.5174458698501665 1.261201176452634 1.1422568066551746 1.1156281224117885 0.8918230397247704 1.0 21.466353028593115 -7.408754371892327 1.9015256968218606 0.9514447760607819 1.2384853716556232 0.37950220260440737 0.14606585159124744 0.4244324772066309 2.7772654234133034 0.12793396453482395 0.04526456022468683 3.901625922959985e-08 7.408754371892327 0.2870405955948413 VFDLQFSTDS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 12 VFDLQFSTDSPR 12 0 C9J470;E9PHA2;Q15003;C9JZP1 C9J470 NCAPH Condensin complex subunit 2 1 VFDLQFS(0.001)T(0.001)DS(0.998)PR;VFDLQFSTDS(1)PR;VFDLQFSTDS(1)PR;VFDLQFSTDS(1)PR;VFDLQFSTDS(1)PR;VFDLQFSTDS(1)PR;VFDLQFSTDS(1)PR;VFDLQFSTDS(1)PR;VFDLQFSTDS(1)PR;VFDLQFST(0.001)DS(0.999)PR;VFDLQFST(0.004)DS(0.996)PR;VFDLQFSTDS(1)PR 324.7 9.027799999999999e-40 2701889000.0 2958510.0 2966060.0 2822630.0 2543390.0 2562460.0 2523710.0 2354100.0 2548490.0 3170700.0 2554620.0 True False 2794395.5526565327 2823566.0254531773 3004581.246167681 2785113.020901912 2764111.0235970006 2507958.5897673084 2592075.4018019703 2539649.883012036 2594980.8068425255 2531988.0542642837 1.1036369417108076 1.115157719918081 1.1866490606491895 1.099970837623552 1.0916761708025375 0.990509645392479 1.0237312918741814 1.0030260129919841 1.0248787716324932 1.0 21.27183916757608 -6.037288219700389 2.3359781653593976 1.009176776853939 1.1309896089839233 0.8341747682480632 0.02498912595771207 0.11652589362861104 1.267899414527808 0.009014900902969431 0.009610651705424087 9.177233468885204e-07 6.037288219700389 0.12181283212998428 VFDMLNRR ddPTM_KYSE-520_SHP099_60min_R1 2 VFDMLNRR 8 1 P60842;P60842-2;J3KT12;J3QS69;J3KSZ0;J3QL43;Q14240-2;Q14240;E7EQG2;J3KTB5;J3QR64;J3QLN6;J3KS25;J3QKZ9 P60842 EIF4A1;EIF4A2 Eukaryotic initiation factor 4A-I;Eukaryotic initiation factor 4A-II;Eukaryotic initiation factor 4A-II, N-terminally processed 0 ; 139.97 0.0015385 1082810000.0 2269900.0 2502200.0 1805840.0 1284150.0 2472900.0 1993930.0 1294100.0 1272110.0 1875890.0 1487220.0 False True 2143984.122066535 2381990.5561212283 1922247.3358461617 1406195.229906223 2667503.16112369 1981485.1432592194 1424920.2571989016 1267697.3473227057 1535275.6633386405 1474044.3878396524 1.4544908821970695 1.6159557851661812 1.3040633997890607 0.953970749800236 1.8096491415927858 1.3442506613815532 0.966673913590386 0.86001300760056 1.0415396415495521 1.0 20.491348538229303 -6.730769067895886 4.843602742888377 0.9521216481963302 1.4195707056967428 0.5217418554208935 0.21027060365458503 0.1610372961233536 9.066254428939741 0.08747518498547377 0.06420865977854275 1.858792588248927e-07 6.730769067895886 0.46744905750041266 VFEEDALSWEDKLNR ddPTM_KYSE-520_SHP099_60min_R1 2 VFEEDALSWEDKLNR 15 1 Q14204 Q14204 DYNC1H1 Cytoplasmic dynein 1 heavy chain 1 0 ; 206.2 4.5129e-12 456140000.0 302580.0 281390.0 162105.0 148465.0 268460.0 239550.0 161514.0 164643.0 179006.0 185089.0 False True 285795.284221724 267871.60202499875 172554.54767717072 162575.06896237 289586.2746715459 238054.87959343908 177841.41134473644 164071.89186096494 146503.02277404148 183449.25545706283 1.557898305499614 1.460194544576363 0.9406118724616898 0.8862127489005888 1.5785633686549627 1.2976606473562764 0.9694310881864607 0.8943720782740748 0.7986024386363957 1.0 17.485021523746173 -6.83681314710743 4.385146557617784 0.8945138407628462 1.274364957253608 0.40349329975217996 0.22171278742370157 0.25106728690078367 9.111917948563327 0.10467411289024942 0.07013733114335714 1.4560854188453366e-07 6.83681314710743 0.37985111649076175 VFFQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 6 VFFQSPR 7 0 Q8TAE6 Q8TAE6 PPP1R14C Protein phosphatase 1 regulatory subunit 14C 1 VFFQS(1)PR;VFFQS(1)PR;VFFQS(1)PR;VFFQS(1)PR;VFFQS(1)PR;VFFQS(1)PR 118.71 0.0025976999999999997 3621210000.0 2905520.0 2685730.0 2470480.0 2154320.0 2423240.0 2261480.0 2104840.0 2111830.0 2835290.0 2392240.0 True False 2744345.013589479 2556703.4994370854 2629731.0937077594 2359065.9250800726 2613935.2016504407 2247365.264466586 2317617.7684587995 2104504.5546348286 2320472.8078444996 2371046.614734555 1.1574403457676077 1.078301659507152 1.109101388967068 0.994947088100238 1.1024393976088394 0.9478368120224344 0.9774661341773168 0.8875846394400952 0.9786702603922793 1.0 21.177092595781925 -5.698766132002986 0.7035648388727918 0.944733943644818 1.1349523781665876 0.6399177821873921 0.04807906849767804 0.49477256642958406 0.5172405819740006 0.028129102396624923 0.055314670685547115 2.000939087192028e-06 5.698766132002986 0.19021843452176956 VFGS(ph)LER ddPTM_KYSE-520_SHP099_60min_R1 6 VFGSLER 7 0 Q14680-3;Q14680-4;Q14680-5;Q14680-2;Q14680-8;Q14680-6;Q14680;Q14680-7 Q14680-3 MELK Maternal embryonic leucine zipper kinase 1 VFGS(1)LER;VFGS(1)LER;VFGS(1)LER;VFGS(1)LER;VFGS(1)LER;VFGS(1)LER 128.12 0.0021495999999999998 9239060000.0 3007240.0 2824380.0 2669940.0 2734790.0 2702050.0 2555070.0 2389040.0 2668260.0 3169760.0 2620100.0 True False 2840422.402415685 2688692.5453191902 2842048.6044550445 2994703.619355402 2914685.9624385405 2539122.8603749075 2630547.4779835134 2659004.428836565 2594211.4871470556 2596887.9524069563 1.093779344535449 1.0353517728122015 1.0944055563971706 1.1531893844629397 1.1223764813329853 0.9777560321851744 1.012961485513982 1.0239195828114322 0.9989693566649959 1.0 21.308352336904555 -6.260098669801674 24.996028379821407 1.0048562762508835 1.098903020025478 0.7278087814892873 0.029673257849304087 77.85246403199326 1451478.1182415588 0.011339557489845697 0.010757478061498463 5.494160347631004e-07 6.260098669801674 0.09404674377459443 VFIDQNLS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 4 VFIDQNLSPGK 11 0 F5H452;Q5JSB6;Q5JSB5;Q14186 F5H452 TFDP1 Transcription factor Dp-1 1 VFIDQNLS(1)PGK;VFIDQNLS(1)PGK;VFIDQNLS(1)PGK;VFIDQNLS(1)PGK 182.89 1.3984e-06 3249020000.0 3295880.0 3091010.0 2420290.0 2331030.0 2621820.0 3092620.0 2646610.0 3085640.0 3263460.0 3337180.0 True False 3113050.966226107 2942513.239899399 2576305.766000922 2552570.3903502733 2828142.3178847996 3073317.811430856 2914155.1672244677 3074936.6350337886 2670897.9291318366 3307615.1814867533 0.9411768889108827 0.8896177694337335 0.7789013003752413 0.7717253218081156 0.8550397076765038 0.9291642596855594 0.8810441987131563 0.9296536828844832 0.8074995979221754 1.0 21.6573599658482 -6.109941161946725 6.065092025746899 0.9029124441084806 0.8402711037819233 0.1845438321426619 0.06443603795431423 0.4446853565854631 21.176971813009818 0.021994082484051762 0.022079715923508176 7.763522894206958e-07 6.109941161946725 -0.06264134032655733 VFIPHGLIMDR ddPTM_KYSE-520_SHP099_60min_R1 1 VFIPHGLIMDR 11 0 P00492 P00492 HPRT1 Hypoxanthine-guanine phosphoribosyltransferase 0 128.01 0.00028343 442730000.0 717830.0 703560.0 464290.0 431190.0 723830.0 631570.0 455560.0 500030.0 533080.0 498550.0 False True 678010.5389413715 669759.9215349103 494218.87629026565 472170.16795799905 780791.3029706674 627628.137361004 501612.45063714654 498295.51263787964 436286.1098532236 494133.2348660311 1.3721208999940937 1.355423748650493 1.000173316462427 0.9555523381988531 1.5801230273093343 1.2701597323870877 1.0151360306155954 1.0084233916647543 0.8829321305852035 1.0 18.914540567591015 -6.8212864508419875 4.855871033685807 0.9706628358164691 1.249817921205248 0.3888629307104521 0.17179654714256484 0.24797983064023932 11.690557737616267 0.0792497598497876 0.05355683442002044 1.509084467766169e-07 6.8212864508419875 0.279155085388779 VFITDDFHDMMPK ddPTM_KYSE-520_SHP099_60min_R1 2 VFITDDFHDMMPK 13 0 P14625 P14625 HSP90B1 Endoplasmin 0 ; 147.87 1.2847e-05 1695660000.0 3119100.0 2641700.0 1409370.0 1550040.0 2738600.0 2643600.0 1858710.0 1943010.0 1815570.0 1941050.0 False True 2946077.3052283 2514788.766727461 1500220.2452717312 1697355.3355634827 2954112.239497493 2627100.3118063677 2046606.5460614879 1936270.151811945 1485908.2547951832 1923853.8071140482 1.5313415678126177 1.3071620917495117 0.7797995043720057 0.8822683559878527 1.5355180464200262 1.365540511494089 1.0638056480661489 1.0064538920015562 0.7723602746219983 1.0 20.875567742774685 -7.194417677828546 2.5635764762724804 0.9007383440863167 1.2123142014217194 0.2458859810473757 0.23948531606806683 0.4936308702079018 6.27479539771059 0.16018099082411558 0.07548242867047981 6.391198734707559e-08 7.194417677828546 0.3115758573354027 VFLAQK ddPTM_KYSE-520_SHP099_60min_R1 1 VFLAQK 6 0 P14618;B4DNK4;P14618-3;P30613-2;P30613;P14618-2;H3BTN5;H3BR70 P14618;P14618-2 PKM;PKLR Pyruvate kinase PKM;Pyruvate kinase;Pyruvate kinase PKLR 0 118.18 0.062878 2030300000.0 2828700.0 3754100.0 2640500.0 2064100.0 3158600.0 3706900.0 2677600.0 3097600.0 3039300.0 3332000.0 False True 2671786.3721263525 3573747.400981016 2810710.85494938 2260271.443405705 3407163.85002438 3683763.8620952596 2948277.938857723 3086855.148585276 2487439.7345180875 3302481.072256775 0.8090239773276179 1.0821401615297885 0.851090678024283 0.6844161689202753 1.0316982218753699 1.11545343682407 0.8927463547407996 0.9347079002260112 0.7532033280718478 1.0 21.6551188621999 -3.978580079081453 16.70728407266761 0.9246369568060959 0.545472680948915 0.06786809628899293 0.13114224983570894 29071145.90743369 552362193.7587228 0.033690087169873394 287568835.99175143 0.00010505577258227325 3.978580079081453 -0.37916427585718093 VFLENVIR ddPTM_KYSE-520_SHP099_60min_R1 3 VFLENVIR 8 0 P62805 P62805 HIST1H4A Histone H4 0 ;; 221.56 4.0786e-08 3009640000.0 1225260.0 1784600.0 617662.0 1073320.0 1307950.0 1759940.0 1535280.0 1137370.0 1249540.0 1141430.0 False True 1157292.3853047465 1698865.137260789 657477.4808141422 1175328.0100945751 1410878.223782496 1748955.561643404 1690481.0852888727 1133424.7289341548 1022655.0343400555 1131317.8182191025 1.0229595668585267 1.5016692125782196 0.5811607226774964 1.038901704867296 1.2471104061663874 1.5459453864136732 1.4942583401983305 1.001862350862969 0.9039502586018652 1.0 20.10957284821679 -7.497311763432477 23.85745125817278 0.9522853294404594 1.2038187440387405 0.13744135084524234 0.27280368770700586 849.9987831422176 793169.9013226621 0.16080649043790468 0.07667148469288641 3.181912528112189e-08 7.497311763432477 0.25153341459828105 VFLENVIRDAVTYTEHAK ddPTM_KYSE-520_SHP099_60min_R1 1 VFLENVIRDAVTYTEHAK 18 1 P62805 P62805 HIST1H4A Histone H4 0 90.259 0.0031604 55228000.0 85802.0 94028.0 82896.0 119310.0 99135.0 101570.0 120250.0 95984.0 147320.0 51165.0 False True 81042.39201795346 89510.75374109465 88239.60879828967 130649.18652814036 106936.3604990082 100936.06395452155 132406.043526905 95651.053906834 120570.40163498334 50711.71790576764 1.5980999138807759 1.765090149527635 1.7400240505016265 2.5763115887912194 2.108711061567999 1.9903893640929429 2.6109555935955773 1.8861726215738244 2.3775649221552086 1.0 15.630031527394186 -5.04282016908854 23.101689293570807 2.137034099076116 1.6993349425287436 0.1291412031980691 0.43221274243746755 307.74702590068233 166030.74619188497 0.10803056808096177 0.18714748538835038 9.061077206675823e-06 5.04282016908854 -0.43769915654737246 VFLQDGPARPAS(ph)PEAGNTLR ddPTM_KYSE-520_SHP099_60min_R1 2 VFLQDGPARPASPEAGNTLR 20 1 Q9UJX6-2;Q9UJX6 Q9UJX6-2 ANAPC2 Anaphase-promoting complex subunit 2 1 VFLQDGPARPAS(1)PEAGNTLR;VFLQDGPARPAS(1)PEAGNTLR 142.4 1.3625e-06 1275270000.0 736080.0 743020.0 742530.0 673590.0 766710.0 1007910.0 825940.0 894090.0 987330.0 1026950.0 True False 695248.1750608983 707324.2039042418 790394.6718900072 737607.7910777824 827045.7150168418 1001619.25982477 909434.0755976042 890988.6104721756 808055.7605638613 1017852.02195501 0.6830542751445543 0.6949185035224169 0.7765320054794207 0.7246709493793051 0.81254022900924 0.9840519429346307 0.8934835869862839 0.875361635339521 0.7938833377879542 1.0 19.957096403125224 -5.955657104168493 3.6226994504034833 0.9010704687295386 0.7225835613475544 0.695601540285927 0.05884171617581959 0.1416552854884108 3.8957142025294744 0.019626766278370206 0.02191288480879712 1.1074978602950805e-06 5.955657104168493 -0.17848690738198414 VFLTDTDPNENFS(ph)AQGEDEWPPLRK ddPTM_KYSE-520_SHP099_60min_R1 1 VFLTDTDPNENFSAQGEDEWPPLRK 25 1 J3QRV5;Q6P1M3;Q6P1M3-2 J3QRV5 LLGL2 Lethal(2) giant larvae protein homolog 2 1 VFLTDTDPNENFS(1)AQGEDEWPPLRK 172.52 1.3123e-10 352610000.0 466360.0 493180.0 432680.0 367820.0 401750.0 402580.0 385590.0 350120.0 530230.0 397020.0 True False 440490.081134388 469486.8925217283 460571.2451124772 402777.5022108842 433365.4393551872 400067.348890531 424569.2001957526 348905.5154386224 433953.59801057004 393502.711676886 1.1194079940574446 1.1930969688138633 1.1704398253058614 1.0235698262267985 1.1013022947375095 1.0166825717303705 1.0789486008532923 0.8866661018720415 1.102796969711607 1.0 18.58601405199757 -5.576639252907663 0.8731086594023595 1.0081455960002033 1.173690856621777 0.44951143806545435 0.0635320487789479 0.5692710301344283 0.8970207611225428 0.02922915024270983 0.06103138509243526 2.6507010315302536e-06 5.576639252907663 0.1655452606215737 VFPEPT(ph)ESGDEGEELGLPLLSTR ddPTM_KYSE-520_SHP099_60min_R1 2 VFPEPTESGDEGEELGLPLLSTR 23 0 Q9BUR4;E9PMG4 Q9BUR4 WRAP53 Telomerase Cajal body protein 1 1 VFPEPT(0.5)ES(0.5)GDEGEELGLPLLSTR;VFPEPT(0.537)ES(0.463)GDEGEELGLPLLSTR 96.131 0.0031985 218462000.0 125499.0 132770.0 88624.0 88746.0 97940.0 96052.0 82040.0 111137.0 121825.0 104587.0 True False 118537.32029394606 126391.52990816713 94336.84484341371 97180.39315754226 105647.32079762802 95452.50383931967 90333.40383324157 110751.49168657076 99704.65095833453 103660.44054745481 1.1435154979847955 1.2192841284550227 0.9100563758479027 0.9374877498524035 1.019167198592636 0.9208190061243506 0.8714356542975307 1.068406530993564 0.9618389660681661 1.0 16.661505904607946 -4.759515684639668 24.99993396324799 0.9601767984664001 1.18139987284255 0.707380374688998 0.056659997581740805 25.110360127448676 326305.26947951835 0.014735774389103288 0.035162197187368585 1.7397398658200675e-05 4.759515684639668 0.22122307437614996 VFPEPTES(ph)GDEGEELGLPLLSTR ddPTM_KYSE-520_SHP099_60min_R1 7 VFPEPTESGDEGEELGLPLLSTR 23 0 Q9BUR4;E9PMG4 Q9BUR4 WRAP53 Telomerase Cajal body protein 1 1 VFPEPT(0.154)ES(0.846)GDEGEELGLPLLSTR;VFPEPT(0.152)ES(0.848)GDEGEELGLPLLSTR;VFPEPT(0.124)ES(0.876)GDEGEELGLPLLSTR;VFPEPT(0.164)ES(0.836)GDEGEELGLPLLSTR;VFPEPT(0.028)ES(0.972)GDEGEELGLPLLSTR;VFPEPT(0.114)ES(0.886)GDEGEELGLPLLSTR;VFPEPT(0.178)ES(0.822)GDEGEELGLPLLSTR 153.87 1.6654e-07 984033000.0 662771.0 677071.0 551752.0 397510.0 452539.0 580024.0 452090.0 525575.0 589531.0 554177.0 True False 626005.7714287669 644543.4928557096 587318.8167544138 435289.23088426073 488151.2447053077 576403.8550670218 497791.66917321034 523751.9029951268 482487.0312671281 549267.4229231823 1.1397103583846022 1.1734602598957562 1.0692766259989046 0.7924905295997102 0.8887314709242788 1.0494047726322824 0.9062828931742943 0.9535462711546541 0.8784191654756235 1.0 19.067149202519516 -5.0373278284222485 6.197628313449601 0.9250018266281466 1.1493935316935793 0.6755740349551285 0.06637563691198996 0.10735919242297509 12.160471913285326 0.018353486964354716 0.033436952716199814 9.176396520852052e-06 5.0373278284222485 0.2243917050654327 VFPLS(ph)PASNLR ddPTM_KYSE-520_SHP099_60min_R1 6 VFPLSPASNLR 11 0 A0A2R8YH03;Q5VWN6;J3KPH3 A0A2R8YH03 FAM208B Protein FAM208B 1 VFPLS(1)PASNLR;VFPLS(0.993)PAS(0.007)NLR;VFPLS(0.992)PAS(0.008)NLR;VFPLS(0.999)PAS(0.001)NLR;VFPLS(0.987)PAS(0.013)NLR;VFPLS(1)PASNLR 228.61 2.3349999999999997e-10 3270900000.0 1781130.0 1888930.0 1549170.0 1180840.0 1304410.0 1658210.0 1328080.0 1525050.0 1843470.0 1739590.0 True False 1682327.168305374 1798182.9674582656 1649031.976959641 1293066.6785675073 1407059.645922342 1647860.4963082327 1462335.2872117436 1519759.9574993441 1508742.3180969474 1724178.5859805418 0.9757267501084484 1.042921529173057 0.956415994473006 0.7499609895874789 0.8160753516853048 0.9557365517163601 0.8481344676834114 0.8814399911103498 0.8750499109342113 1.0 20.717477782129915 -5.009972880223772 24.034128527329134 0.8687290372869984 1.0069103457176303 0.4027376441516357 0.06676489574435368 254.97600455198577 614487.5328300621 0.01754708268282639 0.033376792316721166 9.772982470184386e-06 5.009972880223772 0.13818130843063192 VFPQSSSWS(ph)GQNIFENIKDSDK ddPTM_KYSE-520_SHP099_60min_R1 1 VFPQSSSWSGQNIFENIKDSDK 22 1 Q8TDM6-4;Q8TDM6;Q8TDM6-3 Q8TDM6-4 DLG5 Disks large homolog 5 1 VFPQS(0.001)S(0.004)S(0.032)WS(0.962)GQNIFENIKDSDK 150.48 3.2881e-07 212580000.0 207010.0 259080.0 251800.0 232850.0 227010.0 222040.0 158370.0 158310.0 296730.0 205160.0 True False 195526.7426357957 246633.4079129915 268031.43089424487 254979.99399109467 244874.3954897851 220654.16599844425 174379.58514225326 157760.85955983165 242851.31195457888 203342.4420120648 0.9615638560305803 1.2128968525830832 1.318128317148576 1.2539437978027532 1.2042463593274644 1.0851358123522108 0.8575661008925372 0.7758383247432 1.1942972138603998 1.0 17.633551843036944 -6.526525366147586 3.9073995301446374 0.9390938971859074 1.1996567692087021 0.4008921654133998 0.13297936362323104 0.20792714364010634 7.190585735152023 0.0524426479741015 0.042037161568085825 2.974915495795005e-07 6.526525366147586 0.2605628720227947 VFQSWWDR ddPTM_KYSE-520_SHP099_60min_R1 1 VFQSWWDR 8 0 Q92934 Q92934 BAD Bcl2-associated agonist of cell death 0 104.44 0.014819 244830000.0 207070.0 183680.0 143830.0 138990.0 208790.0 217490.0 141130.0 169720.0 159870.0 133100.0 False True 195583.41431618886 174855.737090699 153101.5119361369 152199.56781113267 225220.58514740408 216132.5642361806 155396.79769606734 169131.28093294564 130841.63799473793 131920.83755023306 1.4825816599421926 1.3254595736182853 1.16055594233048 1.153718932031324 1.7072404127334635 1.6383504550892594 1.1779549052430407 1.2820664579888186 0.9918193397227016 1.0 17.00931293785888 -7.564004241354553 1.686614893280145 0.9842888165094528 1.3872101780876682 0.41134333020289116 0.18070093576544277 0.42316076038764994 2.1617735786961516 0.1787564435729324 0.05716353460976343 2.728951131523469e-08 7.564004241354553 0.40292136157821545 VFS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 6 VFSPIR 6 0 Q03164-2;Q03164;Q03164-3;E9PR05;A0A3B3ITZ1 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 VFS(1)PIR;VFS(1)PIR;VFS(1)PIR;VFS(1)PIR;VFS(1)PIR;VFS(1)PIR 102.46 0.011382 2488310000.0 2900040.0 2472350.0 2551280.0 2130840.0 2176870.0 2458760.0 2517120.0 2946180.0 2942120.0 2814400.0 True False 2739169.000113586 2353574.5949269948 2715739.5909923334 2333354.3929395946 2348177.2843039893 2443413.966809289 2771575.054323855 2935960.3892235802 2407905.1728096455 2789466.6055700644 0.9819687371929662 0.8437364298347679 0.9735694937410215 0.8364876597842413 0.8418015399844186 0.8759430788417505 0.9935860313902007 1.0525167726908773 0.8632134788785393 1.0 21.411557849418948 -6.761847791093466 24.999988703712287 0.981705481330805 0.8889143545813526 0.28828368244497593 0.06521772821381017 13.274967864987442 812496.32983319 0.025441130757800644 0.01835378786544523 1.7304227210540264e-07 6.761847791093466 -0.09279112674945245 VFS(ph)PVIR ddPTM_KYSE-520_SHP099_60min_R1 6 VFSPVIR 7 0 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 VFS(1)PVIR;VFS(1)PVIR;VFS(1)PVIR;VFS(1)PVIR;VFS(1)PVIR;VFS(1)PVIR 148.14 0.0014116 1304559000.0 611888.0 552781.0 524142.0 491649.0 548013.0 564827.0 547308.0 695579.0 730234.0 647677.0 True False 577945.3528715126 526224.571018803 557929.0319768515 538375.1731403385 591138.5053325564 561301.7051810625 602635.2338513375 693166.1987983591 597641.9133011152 641939.0856650808 0.9003118298564614 0.819742219736641 0.8691308014043253 0.838670187191601 0.9208638615922686 0.8743846849573367 0.9387732376927592 1.0798005827612203 0.9309947417860192 1.0 19.29207687929478 -6.940844669931754 3.522803791506186 1.005624765082186 0.8690074424910591 0.6576943945035034 0.04301662155821965 0.13266802665078997 3.3507805151263166 0.019122247233084293 0.011952142199534308 1.1459227196820338e-07 6.940844669931754 -0.1366173225911268 VFSAFALVRT(ph)IRY(ph)LY(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 VFSAFALVRTIRYLYR 16 2 Q92968 Q92968 PEX13 Peroxisomal membrane protein PEX13 3 VFSAFALVRT(1)IRY(1)LY(1)R 47.222 0.061353 0.0 446810.0 336700.0 379980.0 372200.0 400830.0 378750.0 359350.0 398420.0 444260.0 374110.0 True False 422024.5586063475 320524.42660299607 404474.1187894965 407573.77609399 432373.0405892715 376386.08075982105 395676.6049180314 397037.9740119272 363593.5828832314 370795.6764531758 1.1381593298044856 0.8644233116981126 1.0908274946959196 1.0991869700116597 1.1660681826851662 1.0150767785647339 1.0671014524841622 1.0707729329796145 0.9805766517052313 1.0 18.500264896404765 -10.054327859984564 13.579903547997496 0.9999941913423456 1.0544128363825478 0.03898576575298318 0.08144625391992705 0.0 0.0 0.07807526228771189 0.018936032538825844 8.824134924475171e-11 10.054327859984564 0.05441864504020222 VFTAS(ph)PASIAATSFSEDTLKK ddPTM_KYSE-520_SHP099_60min_R1 2 VFTASPASIAATSFSEDTLKK 21 1 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 1 VFTAS(0.983)PAS(0.017)IAATSFSEDTLKK;VFTAS(0.815)PAS(0.185)IAATSFSEDTLKK 243.91 8.985399999999998e-27 1157140000.0 705750.0 1078800.0 723220.0 871820.0 810280.0 992110.0 847850.0 1199020.0 1440900.0 844960.0 True False 666600.6406222545 1026972.8286881864 769839.9183929132 954677.51067776 874044.4261374514 985917.8734854806 933558.9522185988 1194860.879473371 1179268.882133092 837474.3117689319 0.7959654776923792 1.2262738262610007 0.9192400382608037 1.139948410669778 1.0436671475824437 1.1772514805893004 1.1147314479971508 1.426743319385593 1.408125438071305 1.0 19.675685413131063 -6.6536506929144625 1.343018082244108 1.2972965282526345 1.030513153200982 0.28826799037550266 0.1594829667472326 0.5015161740562456 1.8420799598606952 0.08856518802268666 0.05687456528954237 2.2199812534662801e-07 6.6536506929144625 -0.2667833750516526 VFTASPASIAAT(ph)SFSEDTLKK ddPTM_KYSE-520_SHP099_60min_R1 1 VFTASPASIAATSFSEDTLKK 21 1 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 1 VFTASPAS(0.037)IAAT(0.554)S(0.408)FS(0.002)EDTLKK 84.573 0.0070569000000000005 60316000.0 240720.0 327010.0 221050.0 244190.0 252760.0 285130.0 237860.0 296320.0 422300.0 293480.0 True False 227366.78173657667 311299.9487479827 235299.23669250493 267397.7441815994 272650.77399232687 283350.39790639695 261905.210089893 295292.1350816077 345620.96531668055 290879.99552398466 0.7816514893951483 1.0702006103486559 0.8089220307798829 0.9192716869371341 0.9373307830989887 0.9741144192331822 0.900389212458914 1.015168246787391 1.1881909056485191 1.0 18.150064556881507 -7.481459030955606 4.372984955501945 1.0980722033817498 0.9197172117183811 0.41475786669711234 0.08702809510745868 0.18512888410525696 7.856720880278227 0.051288056933755384 0.02136121426312839 3.300205388345689e-08 7.481459030955606 -0.17835499166336877 VFTASPASIAATS(ph)FSEDTLKK ddPTM_KYSE-520_SHP099_60min_R1 1 VFTASPASIAATSFSEDTLKK 21 1 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 1 VFTAS(0.001)PAS(0.013)IAAT(0.087)S(0.869)FS(0.027)EDT(0.002)LKK 62.735 0.024562 37256000.0 216330.0 261740.0 187120.0 216300.0 218900.0 236140.0 214700.0 289760.0 329610.0 245350.0 True False 204329.74365683636 249165.6175202501 199182.0546025857 236857.0869670337 236126.18462937273 234666.16266831447 236403.9712700747 288754.8901904927 269761.13279192767 243176.38987941135 0.8402532160221696 1.0246291494162272 0.8190846763592388 0.9740135014114186 0.9710078546131278 0.9650038919678139 0.9721501803168678 1.1874297925620296 1.1093228784492581 1.0 17.891643638015214 -7.110202592478298 5.181740143808004 1.1101998400451996 0.9374118275625206 0.5112576637659525 0.07250922421037315 0.16984902406742247 6.652289829667556 0.03336109497175229 0.018991043742942564 7.758850923361202e-08 7.110202592478298 -0.17278801248267894 VFTASPASIAATSFSEDT(ph)LKK ddPTM_KYSE-520_SHP099_60min_R1 1 VFTASPASIAATSFSEDTLKK 21 1 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 1 VFTASPASIAATSFS(0.001)EDT(0.999)LKK 214.02 1.0668e-18 826660000.0 158620.0 227700.0 205060.0 453220.0 304380.0 462480.0 322410.0 502130.0 661710.0 422400.0 True False 149821.03239886917 216760.95021533212 218278.4957076007 496293.8925344379 328332.97431470355 459593.490771755 355002.34921837365 500388.22822802246 541560.1443516479 418657.86462222715 0.3578603080442764 0.5177520083396134 0.5213767951178051 1.1854402710964598 0.7842512993538827 1.0977782327974797 0.8479533748606572 1.1952199409404243 1.2935625724846247 1.0 18.67541220130544 -5.20298218267039 6.050418036831304 1.0471438762961736 0.4632204885228104 0.7604104571226313 0.1523040360677111 0.11102129559580279 8.673324843146125 0.04235414805907465 0.07380463321944516 6.2663957260842914e-06 5.20298218267039 -0.5839233877733632 VFVGGLS(ph)PDTSEEQIK ddPTM_KYSE-520_SHP099_60min_R1 1 VFVGGLSPDTSEEQIK 16 0 A0A087WUK2;O14979-3;O14979-2;O14979 A0A087WUK2 HNRNPDL Heterogeneous nuclear ribonucleoprotein D-like 1 VFVGGLS(0.998)PDT(0.002)SEEQIK 196.64 2.363e-12 332640000.0 375770.0 302070.0 251430.0 284610.0 291690.0 403380.0 296480.0 384940.0 361150.0 397490.0 True False 354925.2890210766 287558.103783686 267637.580102224 311659.2488288834 314644.34351092635 400862.3557937863 326451.0917659612 383604.73298567097 295574.2638506257 393968.5478425408 0.9008975233295303 0.7299011694167415 0.6793374282486935 0.7910764718036468 0.7986534590996885 1.0174983713522248 0.8286222175696 0.973693801412259 0.7502483776160711 1.0 18.587720932334665 -6.0582850176256935 9.504004004985566 0.9073170678046315 0.768844542487815 0.3500997005651756 0.09135700716146501 0.5701073380369183 90.36520415847886 0.028957508808583002 0.029032283628175126 8.744097315927616e-07 6.0582850176256935 -0.13847252531681653 VGDGDLS(ph)AEEIPENEVSLR ddPTM_KYSE-520_SHP099_60min_R1 6 VGDGDLSAEEIPENEVSLR 19 0 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR;VGDGDLS(1)AEEIPENEVSLR 361.23 7.912599999999999e-78 3245280000.0 2472560.0 2555220.0 2135460.0 1890720.0 1891510.0 2669880.0 2221270.0 2463220.0 2695840.0 2723510.0 True False 2335402.1678738375 2432463.3957365835 2273115.168456806 2070413.460334302 2040361.0757802867 2653216.288578302 2445817.6491060993 2454675.6647398686 2206343.4125960716 2699381.820258715 0.8651618494081756 0.9011186848340893 0.8420873073224392 0.7669954079100483 0.7558623461369883 0.982897739277214 0.9060658372781388 0.909347335126013 0.8173513639447311 1.0 21.36419762587469 -6.263656173668858 24.999906861865867 0.9163999975585566 0.8279932338583389 0.38418526708509904 0.06101570630424186 257.59926099988724 2905061.3920305665 0.022224661311009572 0.020559118005712678 5.449339004971698e-07 6.263656173668858 -0.08840676370021772 VGDGDLS(ph)AEEIPENEVSLRR ddPTM_KYSE-520_SHP099_60min_R1 4 VGDGDLSAEEIPENEVSLRR 20 1 Q14684-2;Q14684 Q14684-2 RRP1B Ribosomal RNA processing protein 1 homolog B 1 VGDGDLS(0.998)AEEIPENEVS(0.002)LRR;VGDGDLS(1)AEEIPENEVSLRR;VGDGDLS(1)AEEIPENEVSLRR;VGDGDLS(1)AEEIPENEVSLRR 123.85 2.996e-05 2125690000.0 1119960.0 1148710.0 1086980.0 885470.0 963610.0 991590.0 873600.0 939900.0 1248370.0 987710.0 True False 1057833.5862150902 1093524.2473511375 1157048.470029492 969624.8025737378 1039440.6248090899 985401.1189983644 961912.0135143806 936639.7062743093 1021697.4768467544 978959.6578267522 1.0805691304618565 1.1170268750182348 1.1819163954090706 0.9904645148772143 1.0617808573609693 1.0065799046162045 0.9825859582914616 0.9567704846526656 1.0436563638535201 1.0 19.900889883139648 -5.27390805114213 24.976591901294217 1.0055513061983234 1.1255564083993659 0.7003079131705096 0.036129323653249994 405.10187134123237 811478.1720174389 0.0104928044459467 0.015681264648094564 5.3222092919122185e-06 5.27390805114213 0.12000510220104244 VGDQELPDQDEMDLS(ph)DWLVTPQESHK ddPTM_KYSE-520_SHP099_60min_R1 1 VGDQELPDQDEMDLSDWLVTPQESHK 26 0 B4DF87;B4DZ85;Q13772;Q13772-3;Q13772-4 B4DF87 NCOA4 Nuclear receptor coactivator 4 1 VGDQELPDQDEMDLS(1)DWLVTPQESHK 143.47 1.0543e-06 29198000.0 73773.0 68237.0 66009.0 57270.0 72455.0 73678.0 68212.0 78420.0 86002.0 77138.0 True False 69680.66462717044 64958.7920941749 70264.0457581342 62712.923581146606 78156.79628744272 73218.14827253358 75107.53464496667 78147.97932336562 70386.20473399277 76454.61733245595 0.9113990372114532 0.8496385746292798 0.9190294610016475 0.8202633898283104 1.0222639130817306 0.9576681020343235 0.9823806235059471 1.022148590235515 0.9206272582324853 1.0 16.22231601261337 -5.767230800897934 24.99998597015898 0.98387314242283 0.8764042421662636 0.6586954054677048 0.03846774422707044 81.5433759133166 351999.8217360427 0.011030964958443561 0.012845206506084358 1.7091067881967907e-06 5.767230800897934 -0.10746890025656641 VGDSQNPLLS(ph)DGDLSTMIGK ddPTM_KYSE-520_SHP099_60min_R1 2 VGDSQNPLLSDGDLSTMIGK 20 0 B1APE1;B1APE2;Q00403 B1APE1 GTF2B Transcription initiation factor IIB 1 VGDSQNPLLS(1)DGDLSTMIGK;VGDSQNPLLS(1)DGDLSTMIGK 309.23 7.3077e-45 990170000.0 803000.0 879660.0 648610.0 562940.0 718520.0 900460.0 674150.0 828430.0 961400.0 978160.0 True False 758455.9892591857 837399.8132034206 690420.4384126936 616441.648345917 775063.4361804345 894839.8951313234 742299.6610699623 825556.3696870162 786833.9949217548 969494.2633969655 0.7823212760451695 0.8637491162343701 0.7121449445131958 0.6358383660631431 0.7994512865550397 0.9229965858652281 0.7656565789972324 0.8515330114428816 0.811592213206919 1.0 19.886872836210618 -6.001960668295973 24.99919225124341 0.8552762636288813 0.7495840506049404 0.33427778962057086 0.07995633404631015 105.56315183623992 1345995.4449691102 0.025454277465228176 0.02843147144932787 9.954955699226376e-07 6.001960668295973 -0.10569221302394094 VGDSTPVSEKPVSAAVDANAS(ph)ESP ddPTM_KYSE-520_SHP099_60min_R1 1 VGDSTPVSEKPVSAAVDANASESP 24 1 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 VGDSTPVSEKPVSAAVDANAS(0.792)ES(0.208)P 84.641 0.0035464 734020000.0 850060.0 765470.0 650830.0 509080.0 664530.0 705590.0 678890.0 800850.0 895240.0 755070.0 True False 802905.4772474009 728695.6722061061 692783.5431648178 557462.8101395168 716824.7303415133 701186.1510846787 747518.8265279054 798072.0382697945 732686.9831638772 748380.6672355711 1.0728570531000459 0.9736965479049867 0.9257101011492956 0.7448920509915334 0.9578343772419701 0.9369378202603452 0.9988483926090058 1.0663985231176234 0.9790298109521395 1.0 19.513412764651505 -6.794636730951057 3.386851103254272 1.0197200633528736 0.9278988071548498 0.18051878521024312 0.0785976540525762 0.40796528710789753 9.672726281600218 0.037203509605427426 0.02517608872879498 1.6045869989788625e-07 6.794636730951057 -0.09182125619802373 VGDSTPVSEKPVSAAVDANASES(ph)P ddPTM_KYSE-520_SHP099_60min_R1 2 VGDSTPVSEKPVSAAVDANASESP 24 1 Q9H8Y8-2;Q9H8Y8;Q9H8Y8-3 Q9H8Y8-2 GORASP2 Golgi reassembly-stacking protein 2 1 VGDSTPVSEKPVSAAVDANAS(0.132)ES(0.868)P;VGDSTPVSEKPVSAAVDANAS(0.022)ES(0.978)P 169.42 1.4081e-10 1096340000.0 622420.0 589670.0 475750.0 485670.0 546380.0 545550.0 553150.0 599650.0 755390.0 634380.0 True False 587893.1218364917 561341.368087285 506417.6062269146 531827.9307779898 589376.997523055 542145.020088503 609067.800223763 597569.9541093615 618230.2178322698 628759.8867401712 0.9350041792335787 0.8927754138349696 0.805422891801281 0.8458362913945915 0.9373641829772279 0.8622449229375523 0.9686810705776691 0.950394525336985 0.9832532750101269 1.0 19.262149654744835 -6.924949844702407 1.062814271822869 0.990226060959931 0.8725211714285778 0.5672370978641614 0.03995580832709818 0.4118437564506805 0.8843484084045333 0.03225826242695277 0.0159422043217997 1.1886394917302345e-07 6.924949844702407 -0.11770488953135327 VGDTEKPEPERS(ph)PPNR ddPTM_KYSE-520_SHP099_60min_R1 12 VGDTEKPEPERSPPNR 16 2 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 VGDTEKPEPERS(1)PPNR;VGDTEKPEPERS(1)PPNR;VGDT(0.039)EKPEPERS(0.961)PPNR;VGDTEKPEPERS(1)PPNR;VGDTEKPEPERS(1)PPNR;VGDTEKPEPERS(1)PPNR;VGDTEKPEPERS(1)PPNR;VGDTEKPEPERS(1)PPNR;VGDTEKPEPERS(1)PPNR;VGDTEKPEPERS(1)PPNR;VGDT(0.001)EKPEPERS(0.999)PPNR;VGDTEKPEPERS(1)PPNR 181.87 2.3782e-09 169998740000.0 22369980.0 19599180.0 19032310.0 19325240.0 19860190.0 20031480.0 18678300.0 19979780.0 23412700.0 19522600.0 True False 21129072.61595047 18657605.97383104 20259163.155372676 21161904.999254726 21423073.96397635 19906456.10301977 20566484.846641075 19910474.8064957 19161543.866137467 19349644.952352956 1.091961773354458 0.9642350554634976 1.047004387173994 1.0936585684835212 1.1071559202625711 1.02877629806841 1.062886936545063 1.0289839868133883 0.9902788352613873 1.0 24.205803758737343 -7.561631805003304 3.147754840215228 0.9952109616203252 1.054822908779302 0.2884365079691158 0.038378462905641605 0.362465173637878 7.108626638202078 0.031730141955233694 0.010747719903606977 2.7438994649154487e-08 7.561631805003304 0.059611947158976775 VGDTEKPEPERS(ph)PPNRK ddPTM_KYSE-520_SHP099_60min_R1 6 VGDTEKPEPERSPPNRK 17 3 Q9NZ63 Q9NZ63 C9orf78 Uncharacterized protein C9orf78 1 VGDTEKPEPERS(1)PPNRK;VGDTEKPEPERS(1)PPNRK;VGDT(0.001)EKPEPERS(0.999)PPNRK;VGDTEKPEPERS(1)PPNRK;VGDTEKPEPERS(1)PPNRK;VGDTEKPEPERS(1)PPNRK 156.29 1.994e-06 14383600000.0 6305550.0 5986140.0 5509750.0 5611330.0 5485170.0 5511610.0 5478160.0 5762490.0 6988420.0 5351600.0 True False 5955768.571697716 5698556.849020679 5864917.30091169 6144629.116092119 5916821.672651882 5477209.997562075 6031945.874489391 5742501.267165275 5719499.091731934 5304188.987481793 1.1228424525886407 1.0743502658878892 1.1057142410938317 1.1584483755374886 1.115499784531799 1.0326196918112498 1.1372041774388408 1.082635117398329 1.0782985118423 1.0 22.338700748704813 -9.091359037286603 0.43630225288781316 0.9838108862094822 1.1102866251462211 0.48923401320051396 0.03252535382180569 4.393276787110044 1.0254661496888409 0.1527191648233937 0.020437471616053072 8.102909021234407e-10 9.091359037286603 0.1264757389367389 VGDVT(ph)PQVK ddPTM_KYSE-520_SHP099_60min_R1 6 VGDVTPQVK 9 0 E7ETY2;Q13428-6;Q13428-7;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 VGDVT(1)PQVK;VGDVT(1)PQVK;VGDVT(1)PQVK;VGDVT(1)PQVK;VGDVT(1)PQVK;VGDVT(1)PQVK 149.23 0.0013636 9269600000.0 13853800.0 14142700.0 9990500.0 8503750.0 9347500.0 12063400.0 9194410.0 11795700.0 13626700.0 13141900.0 True False 13085302.09713439 13463263.463374523 10634503.615365172 9311943.843254326 10083095.07000028 11988107.845908988 10123870.691594267 11754783.469837068 11152434.781152768 13025472.990243489 1.0045932387204455 1.033610332113003 0.8164389595165387 0.7149025490459564 0.7741058675990387 0.9203587351406339 0.7772363198770119 0.90244580589448 0.856201904491784 1.0 23.634832425835395 -1.6645742710096365 12.937913904645605 0.8705216590779464 0.9766642375918251 0.0 0.10496956241467496 0.0 0.0 0.02552153927591183 0.0 0.021648396269086694 1.6645742710096365 0.10614257851387865 VGDVYIPR ddPTM_KYSE-520_SHP099_60min_R1 2 VGDVYIPR 8 0 Q01130-2;Q01130;J3QL05;J3KP15;Q9BRL6-2;Q9BRL6 Q01130-2;Q9BRL6-2 SRSF2;SRSF8 Serine/arginine-rich splicing factor 2;Serine/arginine-rich splicing factor 8 0 ; 129.68 0.0061466 959530000.0 784460.0 997100.0 635660.0 543480.0 844240.0 1049860.0 709820.0 809440.0 810730.0 889480.0 False True 740944.4400177596 949197.8193223878 676635.6606919612 595132.1757967802 910676.8849314831 1043307.434314207 781575.5327756143 806632.2415647164 663521.8688401438 881599.8992049693 0.8404543157116358 1.076676415433326 0.7675087772833847 0.6750592602534018 1.0329820656203972 1.1834250834818225 0.8865422211146378 0.9149640809761219 0.7526337848251919 1.0 19.749764533399762 -3.972239682490992 16.927829920952828 0.9190291364434197 0.6086510431840713 0.025128198903558885 0.15017938922809243 48212313.397670016 769686100.685471 0.039477025620286155 424223698.4484071 0.00010660076406136918 3.972239682490992 -0.3103780932593484 VGEEEHVY(ph)SFPNK ddPTM_KYSE-520_SHP099_60min_R1 2 VGEEEHVYSFPNK 13 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 VGEEEHVY(0.937)S(0.063)FPNK;VGEEEHVY(0.942)S(0.058)FPNK 134.49 0.00028384 2544700000.0 3730000.0 4660900.0 4044700.0 4879700.0 3837700.0 3322800.0 3393000.0 4026500.0 5071300.0 3991700.0 True False 3523089.464429346 4436983.367846471 4305427.833748818 5343465.220864703 4139705.1564739305 3302061.1726699234 3735997.5524888895 4012533.0112921693 4150479.7570695747 3956336.643495604 0.8904928427214261 1.121487822615164 1.0882359671862445 1.3506093394882361 1.0463480561695357 0.8346259356110813 0.9443072946360715 1.014204142079 1.0490714342757335 1.0 21.915733759131548 -6.001204856958395 24.999568809069228 0.9647839806027863 1.1224474350085292 0.2537859179999772 0.11626669320961056 62.15766524403749 1289754.5820928237 0.03752791329126021 0.04200392887815296 9.9722955910258e-07 6.001204856958395 0.15766345440574292 VGEEEHVYS(ph)FPNK ddPTM_KYSE-520_SHP099_60min_R1 1 VGEEEHVYSFPNK 13 0 A0A1B0GTU4;F5GZ78;P49023;P49023-2;A0A1B0GU60;F5H836;P49023-3 A0A1B0GTU4;P49023-3 PXN Paxillin 1 VGEEEHVY(0.359)S(0.641)FPNK 67.334 0.031239999999999997 560910000.0 515590.0 504210.0 503840.0 569370.0 511350.0 426610.0 441560.0 508430.0 629880.0 490540.0 True False 486989.19489681657 479986.9947653607 536318.3325725028 623482.7536126667 551590.3358164914 423947.36874705495 486197.19401031313 506666.37499845366 515509.6699826449 486194.19723434566 1.0016351442838956 0.98723307990039 1.1030948860008654 1.2823739097654183 1.1345062095642922 0.8719712640723112 1.0000061637427688 1.0421069973285602 1.0602958096066482 1.0 18.8911731492284 -6.210387186293922 24.998392246224583 0.9978279877661763 1.1055128934804175 0.2657252586814124 0.08866749715818595 561.7995815740959 275092.70487213833 0.03273457444258635 0.03273454000171956 6.160455342661093e-07 6.210387186293922 0.10768490571424116 VGEFCHNR ddPTM_KYSE-520_SHP099_60min_R1 2 VGEFCHNR 8 0 P22314;P22314-2;Q5JRS2;Q5JRR9;Q5JRS0 P22314 UBA1 Ubiquitin-like modifier-activating enzyme 1 0 ; 135.84 0.0012125999999999999 1756130000.0 5622700.0 5276700.0 3661800.0 3027400.0 4677600.0 4644500.0 3673000.0 3817900.0 4318100.0 3678600.0 False True 5310797.622425433 5023199.411511819 3897845.4870871548 3315123.185779001 5045700.5080966465 4615511.952710198 4044302.6850255476 3804656.5960045583 3534041.8904427164 3646010.465907492 1.4566051502278328 1.3777249019118063 1.0690713928373161 0.9092467552623623 1.3838963314222883 1.2659074887107866 1.109240558369851 1.043512253072367 0.9692901113390231 1.0 21.79788727197691 -4.692473000312806 4.930670186386043 1.1057681659734875 1.4335812579049703 0.48485854142781537 0.13349883704311613 0.18341151547731044 8.29003842257369 0.03702028185236652 0.1020049104283912 2.0301447281609453e-05 4.692473000312806 0.3278130919314828 VGEFSGANK ddPTM_KYSE-520_SHP099_60min_R1 5 VGEFSGANK 9 0 P10599;P10599-2 P10599 TXN Thioredoxin 0 ;;;; 117.81 0.0060796999999999995 4229630000.0 3775920.0 4772210.0 2973000.0 2901800.0 4430940.0 4475310.0 3697300.0 4668560.0 4148790.0 4291580.0 False True 3566462.19049009 4542945.86836675 3164644.3369681863 3177586.1995420186 4779629.769400065 4447377.930258046 4071059.166170695 4652365.855010098 3395474.3184849457 4253559.939998719 0.8384652481213569 1.068033819306686 0.7439989988642641 0.7470415944210194 1.1236775399482215 1.0455660653648589 0.957094580444991 1.0937581509693028 0.7982664794623696 1.0 22.02023935362855 -5.760126643432731 24.999712347176256 1.007575354936962 0.85747514268953 0.2889425888504581 0.11770097530522093 48.88957114131925 931036.6665322222 0.035960321213902795 0.043906775443319834 1.737294147255543e-06 5.760126643432731 -0.15010021224743197 VGEFSGANKEKLEATINELV ddPTM_KYSE-520_SHP099_60min_R1 6 VGEFSGANKEKLEATINELV 20 2 P10599;P10599-2 P10599 TXN Thioredoxin 0 ;;;;; 151.96 9.392000000000001e-06 3108366000.0 1497126.0 1288185.0 1208915.0 4055799.0 1585225.0 819568.0 1278775.0 1123305.0 2317804.0 518953.0 False True 1414077.436333311 1226298.6589948938 1286843.5952323903 4441260.917539568 1709973.1888035508 814452.7721086866 1408046.0566413146 1119408.5171363582 1896949.2206840266 514355.4801593244 2.7492220669940033 2.3841461912975848 2.501856488111653 8.634613781433538 3.3244968796169476 1.5834433646092494 2.7374959749727266 2.176332439949148 3.688012073083067 1.0 18.972406250592325 -6.0038152315753885 24.996952870864618 2.354311995563859 4.103413789191766 0.18732565043153848 1.7964447517417936 310.95719407551366 2037376.3509552039 0.5935638282513461 0.6585728108669666 9.9125357909427e-07 6.0038152315753885 1.749101793627907 VGELKDDDFEK ddPTM_KYSE-520_SHP099_60min_R1 5 VGELKDDDFEK 11 1 Q02750;Q02750-2 Q02750 MAP2K1 Dual specificity mitogen-activated protein kinase kinase 1 0 ;;;; 115.8 0.0002883 4341870000.0 5803170.0 5627320.0 3801290.0 3640210.0 6122610.0 5950730.0 4004920.0 5293740.0 5323710.0 5248670.0 False True 5481256.591767411 5356975.10042048 4046327.235679045 3986174.463930958 6604424.574114407 5913589.286758786 4409776.397852577 5275377.251508201 4357058.463807882 5202170.867203466 1.0536479350040984 1.0297576218022673 0.7778151350599969 0.7662521216020358 1.2695516434785528 1.1367541431674961 0.8476800378960146 1.0140722760119736 0.8375462042733919 1.0 22.310682355229204 -2.807770989158953 1.7830014964794219 0.9646627873074122 14.7351269893963 0.031915438865365964 0.15299558665983418 942.3113328384604 27.46365433278933 0.04416268738828773 51880.28177986528 0.0015567863350206524 2.807770989158953 13.770464202088887 VGELKDDDFER ddPTM_KYSE-520_SHP099_60min_R1 2 VGELKDDDFER 11 1 P36507;A0A1B0GUL7 P36507 MAP2K2 Dual specificity mitogen-activated protein kinase kinase 2 0 ; 88.087 0.0035760999999999996 647460000.0 935050.0 872200.0 598440.0 483770.0 854910.0 890390.0 659970.0 725190.0 764580.0 748180.0 False True 883180.9125240376 830298.2028011096 637016.3999378541 529747.3553492463 922186.5532274891 884832.7457365984 726686.2082864995 722674.4851506181 625751.5454933173 741551.707275231 1.190990329951786 1.1196767462810788 0.8590316679042073 0.7143768265273882 1.243590358136974 1.193217866071459 0.9799535233445101 0.9745436198994462 0.8438407454991755 1.0 19.500187767560003 -4.571551434670557 8.208381952268804 0.9833273713617225 1.1735671406612305 0.1949915579673407 0.1482281633639803 0.3897670501758292 58.492663670876134 0.04110068141636756 0.11015136226804927 2.681936959748292e-05 4.571551434670557 0.19023976929950792 VGESVFHT(ph)T(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 VGESVFHTTR 10 0 Q9P0J0;Q9P0J0-2 Q9P0J0 NDUFA13 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 2 VGES(0.009)VFHT(0.997)T(0.995)R 73.632 0.046370999999999996 295260000.0 697020.0 764940.0 872350.0 727550.0 774900.0 797700.0 632550.0 769330.0 889590.0 785790.0 True False 658354.9111250789 728191.134201651 928583.0768093504 796696.1332541154 835880.2214221155 792721.2584082095 696494.3270930873 766661.3737929718 728062.8807389671 778828.5119353696 0.8453143420354287 0.9349826348705622 1.1922818214523816 1.0229416630810615 1.0732532368967513 1.0178380044643163 0.8942845779519757 0.9843776416041027 0.9348179600278742 1.0 19.57094617471847 -6.637471318220288 10.40062355429074 0.952142899153655 1.022356851342474 0.09982715791452024 0.08798986277479794 0.7600372502131717 66.02688321928076 0.035445902987378645 0.02743610831073166 2.3042451485383289e-07 6.637471318220288 0.07021395218881887 VGEVIVTKDDAMLLK ddPTM_KYSE-520_SHP099_60min_R1 1 VGEVIVTKDDAMLLK 15 1 P10809 P10809 HSPD1 60 kDa heat shock protein, mitochondrial 0 115.31 0.00018048 786880000.0 536370.0 508180.0 361600.0 483340.0 500190.0 445610.0 394790.0 375470.0 375830.0 361320.0 False True 506616.48687291367 483766.2700062691 384909.31458045606 529276.4882785307 539552.1073082044 442828.7826993632 434699.22597910074 374167.58220535674 307588.7459033105 358118.985902706 1.4146596712706865 1.3508534566712391 1.0748084567765097 1.4779347343017577 1.506628044162926 1.2365409267066092 1.2138402125856576 1.0448135869205517 0.8589009742892447 1.0 18.450079480505458 -7.163502108265656 1.6289679146364657 0.9302505174890797 1.34884474909242 0.6719565045549227 0.11939233670165211 0.25249337956251167 1.2448803759975842 0.09250628454033549 0.039085796197295145 6.862745469103141e-08 7.163502108265656 0.4185942316033403 VGFGS(ph)GQPPPYDHLFEVALPK ddPTM_KYSE-520_SHP099_60min_R1 1 VGFGSGQPPPYDHLFEVALPK 21 0 A0A2R8Y6S1;A0A2R8YFV7;A0A2R8Y5N2;A0A2R8Y5S3;Q92574-2;Q92574;A0A2R8YEH9 A0A2R8Y6S1 TSC1 Hamartin 1 VGFGS(1)GQPPPYDHLFEVALPK 140.55 1.1259999999999999e-06 240500000.0 176860.0 179620.0 170220.0 145540.0 183990.0 168350.0 135080.0 162110.0 204880.0 128880.0 True False 167049.223238331 170990.78558488356 181192.6535616298 159372.07784180332 198468.96624010176 167299.2652037381 148735.20465375757 161547.6782467585 167678.95660450278 127738.22346712282 1.307746567191973 1.3386031286781834 1.418468557363842 1.2476459552674333 1.5537163493680775 1.3097040232972823 1.164375083798147 1.2646776654783956 1.31267644134459 1.0 16.962830765766196 -9.108553048477155 0.35265299482538726 0.9237658062374454 1.371463547849316 0.5380136551344261 0.09416076496178315 4.382405537963452 0.7148252144519543 0.5626934409151043 0.08578313278744215 7.788376747861208e-10 9.108553048477155 0.4476977416118706 VGFQY(ph)EGTYK ddPTM_KYSE-520_SHP099_60min_R1 2 VGFQYEGTYK 10 0 P11413;P11413-3;P11413-2 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VGFQY(0.999)EGT(0.001)YK;VGFQY(0.998)EGT(0.002)YK 171.85 1.2045e-06 1181360000.0 1805020.0 1612640.0 1470580.0 1549610.0 1668410.0 1604700.0 1475220.0 1509090.0 1830760.0 1646080.0 True False 1704891.9423818362 1535166.3537780107 1565375.9398111936 1696884.4684927631 1799704.3750456448 1594684.47206676 1624349.6343597567 1503855.3190142529 1498340.1337039222 1631497.0118308626 1.0449862488369561 0.9409556638140882 0.9594721464151086 1.0400781957844487 1.103100013052442 0.9774363425141726 0.995619129290905 0.9217640658297188 0.9183836212010513 1.0 20.637764914387574 -7.069081144954865 2.901880052015561 0.9405204240729345 1.0105597726293345 0.2521563741001893 0.04871585538039659 0.3888481434501213 6.383895516836395 0.027697520978296225 0.015027646363223521 8.529407329836445e-08 7.069081144954865 0.07003934855640004 VGGFGFVAT(ph)PSPAPGVNES(ph)PMMTWGEVENTPLR ddPTM_KYSE-520_SHP099_60min_R1 1 VGGFGFVATPSPAPGVNESPMMTWGEVENTPLR 33 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 2 VGGFGFVAT(0.834)PS(0.166)PAPGVNES(0.999)PMMT(0.001)WGEVENTPLR 122.91 0.0001671 30393000.0 10021.0 7623.4 7811.4 8236.2 9451.3 12757.0 10698.0 8299.6 13356.0 11405.0 True False 9465.115153631757 7257.160421043308 8314.935342681902 9018.965971696181 10195.063539459079 12677.378831031114 11779.458242418537 8270.8106247412 10930.887077361096 11303.960572955733 0.8373273325348163 0.6420015687604015 0.7355771712947271 0.7978589374483216 0.9019019018741409 1.1214988542477076 1.0420646963861864 0.7316736971401668 0.9669962140095215 1.0 13.464540718371763 -5.726222553456307 2.7630505432752313 0.9636292549793686 0.7333935807055479 0.5032534571555242 0.10335667043342925 0.2389713033303692 3.730555692168989 0.035366597853367154 0.04538493922315931 1.8783540108652362e-06 5.726222553456307 -0.23023567427382063 VGGS(ph)DEEASGIPSR ddPTM_KYSE-520_SHP099_60min_R1 5 VGGSDEEASGIPSR 14 0 H7C446;A8MV53;A0A0A6YYI3;A0A0B4J1V8;Q9NQ55-2;Q9NQ55;Q9NQ55-3 H7C446 PPAN;PPAN-P2RY11 Suppressor of SWI4 1 homolog 1 VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR;VGGS(1)DEEASGIPSR 279.68 2.0888e-26 8291590000.0 12787710.0 10806720.0 11458610.0 9099100.0 11531700.0 11517550.0 10006680.0 10306600.0 12315700.0 10959360.0 True False 12078350.234632103 10287548.949982584 12197250.335024223 9963875.728255838 12439179.183602273 11445664.698231747 11018252.870185537 10270848.810178531 10079479.333532194 10862268.596653063 1.1119546646410259 0.9470902747840755 1.1229008219132512 0.9172923353530364 1.1451732272055117 1.0537084952731186 1.0143601930061403 0.9455528298520658 0.9279350113509377 1.0 23.372822107256546 -7.098599481027092 3.4032135984968885 0.9528034854162978 1.0462025941376532 0.25187999587829424 0.07034461138621156 0.340961941514466 7.362364471414296 0.03425236084967757 0.018757877355134994 7.968939303454133e-08 7.098599481027092 0.09339910872135537 VGGS(ph)SVDLHR ddPTM_KYSE-520_SHP099_60min_R1 8 VGGSSVDLHR 10 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12 O60716-5 CTNND1 Catenin delta-1 1 VGGS(0.996)S(0.004)VDLHR;VGGS(0.974)S(0.026)VDLHR;VGGS(0.987)S(0.013)VDLHR;VGGS(0.919)S(0.081)VDLHR;VGGS(0.935)S(0.065)VDLHR;VGGS(0.892)S(0.108)VDLHR;VGGS(0.731)S(0.269)VDLHR;VGGS(0.987)S(0.013)VDLHR 147.24 0.00012057 12691850000.0 9070590.0 9417720.0 9480240.0 12026320.0 9252030.0 8943700.0 8368140.0 9248840.0 11616470.0 9963320.0 True False 8567426.29092712 8965278.594914079 10091351.43932031 13169297.836955057 9980112.124150274 8887879.050802927 9214073.256376166 9216757.932735484 9507211.87537832 9875052.736145657 0.8675828392862924 0.907871465040229 1.0219035491712296 1.3335926590803384 1.0106388685520704 0.9000335783798524 0.9330657265909976 0.933337591099578 0.96275049150665 1.0 23.235357022004838 -6.013777431646235 24.793676291733693 0.942479870115929 1.0416785917135896 0.10874374274741605 0.11811516061703026 1354.642946451802 2437796.280558646 0.04207353658611484 0.043815915402589056 9.6877420896413e-07 6.013777431646235 0.09919872159766052 VGGSS(ph)VDLHR ddPTM_KYSE-520_SHP099_60min_R1 6 VGGSSVDLHR 10 0 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12 O60716-5 CTNND1 Catenin delta-1 1 VGGS(0.377)S(0.623)VDLHR;VGGS(0.06)S(0.94)VDLHR;VGGS(0.08)S(0.92)VDLHR;VGGS(0.014)S(0.986)VDLHR;VGGS(0.098)S(0.902)VDLHR;VGGS(0.36)S(0.64)VDLHR 153.34 8.515299999999999e-05 6339460000.0 5656540.0 5373020.0 5042490.0 5915250.0 5374520.0 4764860.0 4799190.0 5052140.0 6452930.0 4950960.0 True False 5342760.450167063 5114892.05413256 5367536.9736692635 6477433.581515238 5797464.147164262 4735120.741304925 5284338.960780772 5034615.305518336 5281240.577127562 4907098.346188598 1.0887820200947977 1.0423455356474276 1.0938311390963447 1.3200129943485517 1.1814444582442944 0.9649532997403139 1.0768765139759593 1.0259862245126554 1.0762451054663627 1.0 22.226438754962388 -6.25073898408922 24.780474615240852 1.0334403840709818 1.1464132304040617 0.36874114047755324 0.07606815133532452 832.1801351581665 1927201.7460376974 0.027843109204126807 0.02756936203445006 5.61385273580939e-07 6.25073898408922 0.11297284633307991 VGIDT(ph)PDIDIHGPEGK ddPTM_KYSE-520_SHP099_60min_R1 4 VGIDTPDIDIHGPEGK 16 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VGIDT(1)PDIDIHGPEGK;VGIDT(1)PDIDIHGPEGK;VGIDT(1)PDIDIHGPEGK;VGIDT(1)PDIDIHGPEGK 180.05 1.2172000000000001e-08 3643450000.0 3379480.0 3027490.0 2913950.0 2914040.0 2645260.0 3517540.0 3020660.0 3528000.0 4003140.0 3729060.0 True False 3192013.5075736386 2882044.836044863 3101787.8794848435 3190989.485461926 2853426.912529443 3495585.7280947836 3326017.791600676 3515762.191441392 3276270.686947234 3696023.42956478 0.8636345435584832 0.7797690926391757 0.8392230023958722 0.8633574830551538 0.7720261970486059 0.9457693639421548 0.8998908840770866 0.9512283291600739 0.8864312549374251 1.0 21.817542471535337 -6.274243290693782 24.999976770977394 0.9313174252450179 0.8242433626346627 0.660722341196581 0.04041727371847583 483.2719198516042 943598.3462269545 0.0133584240593194 0.011853042881556029 5.318102570149001e-07 6.274243290693782 -0.10707406261035524 VGKDELFALEQSCAQVVLQAANER ddPTM_KYSE-520_SHP099_60min_R1 4 VGKDELFALEQSCAQVVLQAANER 24 1 Q16658 Q16658 FSCN1 Fascin 0 ;;; 222.06 3.4997e-21 687914000.0 993558.0 770861.0 568180.0 968496.0 744659.0 576840.0 597152.0 794242.0 720770.0 464235.0 False True 938443.3571312313 733827.6804740492 604805.7919201425 1060541.5686510606 803259.4267698688 573239.7275920662 657517.9518018991 791486.9598794769 589896.3371330902 460122.23906936427 2.03955226991269 1.594853754424644 1.3144459027744733 2.304912648421634 1.7457522340031384 1.2458422543354815 1.4290071115271112 1.7201667136983545 1.282042655287006 1.0 18.811657662283558 -6.191969260180127 6.969345423414302 1.38682165149956 1.7918979174377412 0.37276899579365796 0.2976685320381119 0.34262651069636924 29.460837791265167 0.09999540021340314 0.0998814351047981 6.427332090390742e-07 6.191969260180127 0.40507626593818125 VGKPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 VGKPSPK 7 1 A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;Q7Z5J4 A0A1W2PQJ7 RAI1 Retinoic acid-induced protein 1 1 VGKPS(1)PK 63.283 0.058053 1187700000.0 2559100.0 1953300.0 1875700.0 1926300.0 2245900.0 2068400.0 2109900.0 2113200.0 2257100.0 2086200.0 True False 2417141.621560628 1859460.536036926 1996610.6232261104 2109374.972836785 2422639.552577014 2055490.3483659758 2323189.2826396436 2105869.8024245882 1847267.5368607177 2067717.8910390406 1.1689900406800657 0.8992815432392163 0.9656107498411215 1.020146404873835 1.1716489773948917 0.9940864550594373 1.1235523437252977 1.0184512169435145 0.893384704396234 1.0 20.979607934395773 -7.5812453045439065 8.001699327324857 0.9485499693116665 1.0436373239899523 0.17876820198370025 0.08609115615584562 0.4752240959001395 56.723749289610495 0.0587274038969871 0.021993982034306383 2.62273671252386e-08 7.5812453045439065 0.09508735467828588 VGLPARPKS(ph)PLDPK ddPTM_KYSE-520_SHP099_60min_R1 2 VGLPARPKSPLDPK 14 2 Q8IYH5;Q8IYH5-4;Q8IYH5-3 Q8IYH5 ZZZ3 ZZ-type zinc finger-containing protein 3 1 VGLPARPKS(1)PLDPK;VGLPARPKS(1)PLDPK 107.03 0.00036572 2841900000.0 3696600.0 3438300.0 3852200.0 2913400.0 3170000.0 3115200.0 2883300.0 3014600.0 4421000.0 2904200.0 True False 3491542.2290105936 3273118.9070064826 4100518.975737924 3190288.6600543507 3419460.9651672584 3095756.8812752347 3174772.1022962625 3004143.0562129286 3618257.844340628 2878471.047433408 1.2129850088726204 1.1371032930572509 1.4245475838272394 1.1083275139762045 1.187943498065136 1.0754865448570587 1.102936958538128 1.0436592922800374 1.2570068570141957 1.0 21.456871270571394 VGLVEDSPSTAGDGDDSPVVSLTVPSTS(ph)PPSSSGLSR ddPTM_KYSE-520_SHP099_60min_R1 1 VGLVEDSPSTAGDGDDSPVVSLTVPSTSPPSSSGLSR 37 0 Q6VY07-2;Q6VY07;B4DF77 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 VGLVEDSPSTAGDGDDSPVVSLTVPS(0.137)T(0.137)S(0.598)PPS(0.032)S(0.032)S(0.032)GLS(0.032)R 97.804 0.00052015 64943000.0 34781.0 54868.0 37192.0 26554.0 30376.0 46664.0 25220.0 40630.0 47838.0 47093.0 True False 32851.62859579546 52232.05892145295 39589.455829304 29077.684176248782 32766.418384202065 46372.75266686811 27769.483723480636 40489.06401311329 39151.82509784367 46675.79265779961 0.703825831874885 1.119039569491379 0.8481796146356078 0.622971405958327 0.7020002557734119 0.9935075555512636 0.5949440200634772 0.8674531637835505 0.8388036467828753 1.0 15.510386902349431 -4.994773552999939 24.99777304226428 0.7880036906384428 0.9294769219906961 0.061065282874060656 0.15963202122390144 299.03027032560846 1430205.321172538 0.03980603608112157 0.08244656170206413 1.0121070429641926e-05 4.994773552999939 0.14147323135225331 VGMADANS(ph)PPKPLSK ddPTM_KYSE-520_SHP099_60min_R1 2 VGMADANSPPKPLSK 15 1 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 VGMADANS(1)PPKPLSK;VGMADANS(1)PPKPLSK 132.59 1.7924e-05 3094300000.0 3116930.0 2833670.0 1952450.0 2336890.0 2318900.0 3140050.0 2668630.0 3784190.0 2873170.0 3742040.0 True False 2944027.679454092 2697536.2397746174 2078308.051030455 2558987.322988405 2501384.2372638313 3120451.7832075898 2938401.1637189556 3771063.5281265816 2351474.754721588 3708888.436863069 0.793776283533649 0.7273166302236256 0.5603587399324046 0.689960716411509 0.6744296248984697 0.8413442022663881 0.79225924794983 1.0167638073568208 0.6340106462491591 1.0 21.822555441639327 -6.296056163152152 4.675062890188727 0.8559283915940955 0.683645005758461 0.35164577782625484 0.11377520472980311 0.23504039344230848 12.75971800667209 0.039019275783567925 0.03522442463311211 5.057592527662849e-07 6.296056163152152 -0.17228338583563452 VGMADANS(ph)PPKPLSKPR ddPTM_KYSE-520_SHP099_60min_R1 3 VGMADANSPPKPLSKPR 17 2 P26358;P26358-2;K7EJL0 P26358 DNMT1 DNA (cytosine-5)-methyltransferase 1 1 VGMADANS(1)PPKPLSKPR;VGMADANS(1)PPKPLSKPR;VGMADANS(0.998)PPKPLS(0.002)KPR 149.94 3.5052999999999997e-06 11104200000.0 3973990.0 3612060.0 3308380.0 3307180.0 3350430.0 3579980.0 3345900.0 3921420.0 3837270.0 3987410.0 True False 3753544.852747336 3438531.215787406 3521643.4683951596 3621493.3928600773 3614089.779660989 3557636.01689385 3684136.2248371807 3907817.50928631 3140518.4977048053 3952084.6495580412 0.9497632732049635 0.8700550521284848 0.8910850299699381 0.9163501579514666 0.9144768141707568 0.9001922611378524 0.9322007374637522 0.9887990404566154 0.7946485908534392 1.0 21.914182417610558 -6.762900567888596 24.617481408882192 0.9279786809037343 0.9053515821378342 0.03604194583563414 0.0550759119297147 132.01863006316208 2224104.3832434737 0.021036961608320744 0.015060511294889329 1.7262330693608676e-07 6.762900567888596 -0.022627098765900078 VGNES(ph)PVQELK ddPTM_KYSE-520_SHP099_60min_R1 8 VGNESPVQELK 11 0 Q5JSH3-2;Q5JSH3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VGNES(1)PVQELK;VGNES(1)PVQELK;VGNES(1)PVQELK;VGNES(1)PVQELK;VGNES(1)PVQELK;VGNES(1)PVQELK;VGNES(1)PVQELK;VGNES(1)PVQELK 313.8 3.8696e-38 24289870000.0 26705570.0 25739480.0 20773380.0 17842430.0 19852470.0 24371920.0 19700780.0 23974770.0 27766500.0 23960090.0 True False 25224158.795866057 24502916.745052878 22112465.313383177 19538169.18267779 21414746.443897165 24219805.806975335 21692327.10348426 23891607.11862337 22724803.536503952 23747822.243267957 1.0621672394830484 1.031796368275368 0.9311365516748227 0.8227351957805933 0.901756221034871 1.0198748145776262 0.9134448995479412 1.0060546551966958 0.9569215780594782 1.0 24.501291883638622 -9.545038499315552 17.1445431491143 0.9999999999978183 0.9577782591513216 0.027514826366739187 0.06827400037839405 0.0 0.0 0.07143823806357671 0.017326317720243938 2.8507655417808245e-10 9.545038499315552 -0.04222174084649666 VGPAT(ph)PSAQVGK ddPTM_KYSE-520_SHP099_60min_R1 4 VGPATPSAQVGK 12 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 VGPAT(0.977)PS(0.023)AQVGK;VGPAT(0.961)PS(0.039)AQVGK;VGPAT(0.658)PS(0.342)AQVGK;VGPAT(0.96)PS(0.04)AQVGK 154.23 0.00015627 3637330000.0 11395100.0 14742900.0 10058100.0 9278000.0 9840500.0 13798100.0 10167600.0 13664000.0 14590400.0 14776800.0 True False 10762991.087431313 14034628.95445593 10706461.219528997 10159778.330467572 10614891.365213986 13711980.939754684 11195440.234213395 13616602.77320159 11941151.154052803 14645889.048176426 0.7348813753830413 0.9582640499521875 0.7310215982321722 0.6936948857831595 0.7247693417789244 0.9362341128387816 0.7644083740759562 0.9297218303655664 0.815324430956249 1.0 23.80399243588323 -8.180112545148338 0.504659066967054 1.003182689677472 0.7826722571612656 0.3252303334603144 0.08982802371139573 1.567002821823532 0.9108301565830116 0.11684465997844352 0.05025146474231692 6.6052225493165545e-09 8.180112545148338 -0.2205104325162064 VGPATPS(ph)AQVGK ddPTM_KYSE-520_SHP099_60min_R1 2 VGPATPSAQVGK 12 0 E7ETY2;Q13428-6;Q13428-7;A0A3B3IS06;H0Y8Y7;Q13428-5;Q13428;Q13428-3;Q13428-4;Q13428-2;Q13428-8;A0A6I8PRA0 E7ETY2;Q13428 TCOF1 Treacle protein 1 VGPAT(0.386)PS(0.614)AQVGK;VGPAT(0.147)PS(0.853)AQVGK 164.53 3.1156e-06 6570000000.0 11040100.0 14039300.0 9739800.0 8819300.0 9266200.0 14045000.0 9953500.0 13726400.0 14320700.0 14503300.0 True False 10427683.64510629 13364830.954581087 10367643.09223099 9657483.620380761 9995397.22253401 13957339.945271783 10959696.916798733 13678786.322165852 11720421.875469066 14374812.045396673 0.7254135645165257 0.9297395271933996 0.7212367757915192 0.6718337317998834 0.6953410723540481 0.9709580828739546 0.76242366732777 0.9515801861594627 0.8153443563961147 1.0 23.7770397567592 -6.254979947165358 24.995669495894905 0.888432671367826 0.7529724469501655 0.39267400928179075 0.09347920351370763 630.5003113727762 2439810.1364828115 0.03140402506389137 0.030697769798258598 5.559299258293513e-07 6.254979947165358 -0.13546022441766048 VGPCS(ph)SPPAAR ddPTM_KYSE-520_SHP099_60min_R1 2 VGPCSSPPAAR 11 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 VGPCS(0.823)S(0.177)PPAAR;VGPCS(0.686)S(0.314)PPAAR 80.979 0.0092081 1748310000.0 2441850.0 2304880.0 2009370.0 1670030.0 1863520.0 2311640.0 1809510.0 2357190.0 2963640.0 2584590.0 True False 2306395.712792708 2194150.1051045866 2138897.2053056746 1828749.1490871701 2010168.4220216048 2297212.197300678 1992432.9299157583 2349013.458062279 2425517.683284699 2561692.5433805906 0.9003405653627056 0.8565235944392573 0.8349546907307754 0.7138831526885047 0.7847032334992257 0.8967556248062128 0.7777798842660497 0.9169771228526725 0.9468418407791492 1.0 21.288665901850866 -7.599863900652423 1.9110987985442216 0.9896428534698695 0.8217835173296565 0.5551989493427039 0.054876459841298256 0.2699430428807096 1.789924639460969 0.052044567865443175 0.016221805462762227 2.5126737306612294e-08 7.599863900652423 -0.16785933614021298 VGPCSS(ph)PPAAR ddPTM_KYSE-520_SHP099_60min_R1 6 VGPCSSPPAAR 11 0 Q8TDM6-4;Q8TDM6;A0A0J9YYG8;Q8TDM6-2;A0A0A0MSL1 Q8TDM6-4 DLG5 Disks large homolog 5 1 VGPCS(0.386)S(0.614)PPAAR;VGPCS(0.325)S(0.675)PPAAR;VGPCS(0.37)S(0.63)PPAAR;VGPCS(0.308)S(0.692)PPAAR;VGPCS(0.366)S(0.634)PPAAR;VGPCS(0.118)S(0.882)PPAAR 145.23 7.581600000000001e-05 6842510000.0 5682460.0 5595790.0 4782620.0 3865370.0 4292920.0 5440860.0 4591190.0 5421640.0 6664200.0 5557460.0 True False 5367242.616096825 5326959.848947977 5090915.337662563 4232733.602634133 4630748.380626434 5406901.574555456 5055312.290896386 5402833.596260294 5454149.270810859 5508225.228038454 0.9744050749370257 0.9670918723207278 0.9242387750864536 0.7684387306982835 0.8406969920283198 0.9816050271569812 0.9177751601665431 0.9808664992052819 0.990182689525415 1.0 22.39315612094136 -7.050776798747412 1.3485165233540177 0.9949211678835655 0.8997837919408403 0.27348507714965276 0.06097464353271392 0.6946776258972753 2.3738085282350228 0.051195395303407346 0.02300029410177339 8.896582312253733e-08 7.050776798747412 -0.0951373759427252 VGQQAIVLCIS(ph)PSKPNPVFK ddPTM_KYSE-520_SHP099_60min_R1 1 VGQQAIVLCISPSKPNPVFK 20 1 C9JP85;Q16656-2;Q16656;Q16656-4 C9JP85 NRF1 Nuclear respiratory factor 1 1 VGQQAIVLCIS(0.985)PS(0.015)KPNPVFK 177.7 1.4942e-09 1206600000.0 523130.0 672460.0 497540.0 411990.0 457770.0 720050.0 463890.0 581860.0 607560.0 511800.0 True False 494110.9360661997 640154.0122169616 529612.2244921464 451145.40573068935 493793.8946449888 715555.9008610137 510784.52833011176 579841.6634671452 497242.4193412322 507265.85017437517 0.9740670220483926 1.261969462357668 1.044052589603833 0.8893667996290424 0.973442021526276 1.4106131934862909 1.0069365563530976 1.1430725393160641 0.9802402806542223 1.0 18.952382513986436 -7.777867196054182 24.569492821232117 0.9901200053321161 1.0898980395777451 0.06732597696706555 0.1454873079477221 685.7762483087573 1025613.1790642402 0.14022829939194317 0.03667153697003028 1.667757122013367e-08 7.777867196054182 0.09977803424562903 VGQQAIVLCISPS(ph)KPNPVFK ddPTM_KYSE-520_SHP099_60min_R1 1 VGQQAIVLCISPSKPNPVFK 20 1 C9JP85;Q16656-2;Q16656;Q16656-4 C9JP85 NRF1 Nuclear respiratory factor 1 1 VGQQAIVLCIS(0.374)PS(0.626)KPNPVFK 210.88 7.703699999999999e-19 1384500000.0 395840.0 568360.0 415680.0 344420.0 375440.0 459590.0 328570.0 510890.0 493660.0 398770.0 True False 373881.9661125233 541055.1324742469 442475.3979115154 377153.57324635156 404984.9920386105 456721.52833374596 361785.06213418057 509117.84183262207 404023.78815589065 395237.2080383655 0.9459685437212954 1.368937745410161 1.1195185800132574 0.9542461225202801 1.0246631233142878 1.1555630872926623 0.9153618504942537 1.288132370834889 1.0222311562242192 1.0 18.592359244551744 -5.000212525208839 24.999812727651204 1.0591568496684831 1.1791468776755365 0.08617562331521711 0.1377870749245581 16.288811242242122 1917116.9635315216 0.034313790220373855 0.07020240503762024 9.995107623380338e-06 5.000212525208839 0.11999002800705338 VGRLS(ph)LQDVPELVDAK ddPTM_KYSE-520_SHP099_60min_R1 6 VGRLSLQDVPELVDAK 16 1 Q8N5W9 Q8N5W9 FAM101B Filamin-interacting protein FAM101B 1 VGRLS(1)LQDVPELVDAK;VGRLS(1)LQDVPELVDAK;VGRLS(1)LQDVPELVDAK;VGRLS(1)LQDVPELVDAK;VGRLS(1)LQDVPELVDAK;VGRLS(1)LQDVPELVDAK 193.87 1.9329e-12 1289771000.0 1444420.0 1465220.0 1252110.0 1064404.0 1091582.0 1578120.0 1248850.0 1496790.0 1770090.0 1618800.0 True False 1364295.1432201148 1394828.6318599426 1332823.0140468343 1165564.6361352687 1177483.2931480142 1568270.3677061098 1375095.9456014577 1491597.9848434106 1448686.2763376818 1604458.691407342 0.8503149071562764 0.869345305884115 0.8306994883600002 0.7264535025908958 0.7338819624674733 0.9774451508817034 0.857046649418752 0.929658078971833 0.9029127917696496 1.0 20.61365521561641 -6.266111629735173 24.996453096102776 0.9242432963780028 0.80325465517937 0.5743164098271726 0.056228170529005514 345.34528806199233 1847584.636512544 0.02084757764293458 0.01899242861762124 5.418615940411155e-07 6.266111629735173 -0.12098864119863284 VGRLS(ph)PCVPAKPPLAEFEEGLLDR ddPTM_KYSE-520_SHP099_60min_R1 2 VGRLSPCVPAKPPLAEFEEGLLDR 24 2 Q15742 Q15742 NAB2 NGFI-A-binding protein 2 1 VGRLS(1)PCVPAKPPLAEFEEGLLDR;VGRLS(1)PCVPAKPPLAEFEEGLLDR 166.74 1.5996e-10 285200000.0 217240.0 177076.0 141600.0 126536.0 150556.0 179705.0 135446.0 184629.0 244490.0 170291.0 True False 205189.2641427967 168569.00316350517 150727.76256801072 138561.9433955643 162403.90065353975 178583.39443681476 149138.2035055731 183988.56509173234 200096.77909134587 168782.3542243934 1.2157032948479962 0.9987359397736295 0.8930303363799548 0.8209504129285248 0.96220900223744 1.0580691047797037 0.8836125327846551 1.0900936056806183 1.1855313904753364 1.0 17.364804556185277 -7.39597679021449 7.299411428341202 1.10715343728533 0.9705955375737964 0.18377165467369372 0.11055803869909982 0.406443354471998 22.10938690415645 0.06318208480237936 0.03000860790434092 4.01812284130598e-08 7.39597679021449 -0.13655789971153365 VGRPS(ph)NIGQAQPIIDQLAEEAR ddPTM_KYSE-520_SHP099_60min_R1 1 VGRPSNIGQAQPIIDQLAEEAR 22 1 Q9UHX1;H0YEM1;A0A0J9YXX5;A0A0J9YVP6;A0A0J9YXJ8;E9PMU7;A0A0J9YYL3;A0A0J9YWM1;E9PQ56;A0A0J9YVR6;E9PN18;Q9UHX1-4;Q9UHX1-6;Q9UHX1-3;Q9UHX1-5;Q9UHX1-2 Q9UHX1 PUF60 Poly(U)-binding-splicing factor PUF60 1 VGRPS(1)NIGQAQPIIDQLAEEAR 50.858000000000004 0.057198 0.0 50707.0 63161.0 63826.0 56047.0 54716.0 47029.0 56140.0 58496.0 51193.0 43577.0 True False 47894.181628101534 60126.650753406175 67940.3260852107 61373.690028854966 59021.83790854619 46735.47456647821 61815.179073600404 58293.09102906906 41897.64167051113 43190.941682392964 1.1088941283173244 1.3921125220086865 1.5730225699827 1.420985226026556 1.3665327869571964 1.082066580306356 1.4312070231800413 1.3496601083099926 0.9700562210152261 1.0 15.398441151192975 -7.76016597509355 24.988827257018215 0.9850279486826694 1.3479790138107197 0.5104837872432895 0.1391098767349791 26.459885788761362 519329.19919317344 0.1115016224643244 0.03682063687393188 1.7371368172112594e-08 7.76016597509355 0.3629510651280503 VGRPTAS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 VGRPTASK 8 1 Q9H1E3;Q9H1E3-2 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VGRPT(0.003)AS(0.997)K 65.5 0.018578 282620000.0 348350.0 362810.0 361600.0 338150.0 329440.0 352380.0 317520.0 349810.0 404420.0 350650.0 True False 329026.3310814909 345380.0630110871 384909.31458045606 370287.67433149513 355365.0537428076 350180.66571127577 349618.02029657323 348596.5907562674 330987.52259856 347543.5138015717 0.9467198149735775 0.9937750218186499 1.1075140213959458 1.0654426269710477 1.0225052105150252 1.0075879761957225 1.0059690554207437 1.0030300578571494 0.9523628249541604 1.0 18.406834094620013 -6.908305600588807 1.3159198999593995 0.9815022849852988 1.0307017465554873 0.1569028800893748 0.04157054257029455 0.87566602657632 2.9640151235839465 0.03143647570193245 0.015925485839529404 1.235078038552904e-07 6.908305600588807 0.04919946157018851 VGS(ph)EHSLLDPPGK ddPTM_KYSE-520_SHP099_60min_R1 4 VGSEHSLLDPPGK 13 0 Q96RT1-7;Q96RT1-6;Q96RT1-4;Q96RT1-5;Q96RT1-3;Q96RT1-9;Q96RT1-2;Q96RT1;Q96RT1-8;H0YA04 Q96RT1-7 ERBB2IP Protein LAP2 1 VGS(0.999)EHS(0.001)LLDPPGK;VGS(0.989)EHS(0.011)LLDPPGK;VGS(0.998)EHS(0.002)LLDPPGK;VGS(0.975)EHS(0.025)LLDPPGK 166.9 5.354600000000001e-07 2102040000.0 3184990.0 3469500.0 2787780.0 3943820.0 3508140.0 4186070.0 3786990.0 4962870.0 5750870.0 4070050.0 True False 3008312.2555798455 3302820.012174329 2967484.7594057093 4318639.46704728 3784210.65941383 4159943.184386171 4169815.9066607454 4945654.962312565 4706656.975635184 4033992.523450987 0.745740662158269 0.8187471823445134 0.7356197965550751 1.0705620900240995 0.9380807320328213 1.0312223337556996 1.0336697161484982 1.2259950740021879 1.1667490577322013 1.0 21.943776979405396 -5.4726806651658455 0.6748025488432089 1.1285473356992612 0.7083421020446665 0.7082552049223756 0.0856994255367907 0.531560837986477 0.4613175152236384 0.0505425971475601 0.1381520860253017 3.3675909585290858e-06 5.4726806651658455 -0.4202052336545947 VGS(ph)ES(ph)EDEDLLSELELADR ddPTM_KYSE-520_SHP099_60min_R1 1 VGSESEDEDLLSELELADR 19 0 Q5SXM2 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 2 VGS(1)ES(1)EDEDLLSELELADR 147.16 6.7577e-06 0.0 35132.0 35988.0 32337.0 32090.0 35653.0 33403.0 29815.0 42202.0 44690.0 37864.0 True False 33183.15792609431 34259.08246091071 34421.49476102937 35139.8239517897 38458.68826217921 33194.519486786274 32828.991166359025 42055.611112020844 36575.42254322156 37528.554417746236 0.8842109279435206 0.912880418455727 0.9172081177939637 0.9363489880434358 1.0247846968492114 0.8845136723702175 0.8747736670303262 1.1206296582565378 0.9746024889763949 1.0 15.195701098910627 -7.249540369179497 24.998327394287966 1.035712060726383 0.9223037444301146 0.4843627545275887 0.053078600116395015 614.6486860094845 1291303.1822473633 0.025294281095172108 0.014448353757617004 5.62936788033823e-08 7.249540369179497 -0.11340831629626835 VGS(ph)LDNVGHLPAGGAVK ddPTM_KYSE-520_SHP099_60min_R1 14 VGSLDNVGHLPAGGAVK 17 0 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-4;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK;VGS(1)LDNVGHLPAGGAVK 172.81 1.4428e-08 88203200000.0 54175110.0 49714970.0 40571760.0 34802490.0 38600600.0 38460000.0 34280550.0 41589520.0 49333400.0 40586300.0 True False 51169908.65289563 47326588.21750867 43187080.56671117 38110108.18584987 41638247.61262938 38219956.87398736 37745962.53992715 41445255.66218698 40375698.15380998 40226736.95766357 1.2720372698076192 1.176495828317303 1.0735914427303213 0.9473825387815735 1.0350888677958479 0.9501132770030978 0.9383302100702996 1.0302912638876434 1.0037030395058684 1.0 25.26165138089936 -4.716111274678821 1.7094894158305516 0.985343653429144 1.2774640418815166 0.89133936307857 0.03354499879263635 0.13350684220582154 0.6769595468421514 0.009817501765350543 0.048412570676093614 1.9225990585877007e-05 4.716111274678821 0.29212038845237265 VGS(ph)LTPPS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 VGSLTPPSSPK 11 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 2 VGS(0.917)LT(0.087)PPS(0.554)S(0.441)PK 63.091 0.045745999999999995 1369400000.0 583890.0 617830.0 579300.0 485230.0 588640.0 581400.0 561400.0 594750.0 801590.0 611540.0 True False 551500.457744142 588148.5194182629 616642.6049127723 531346.1133102812 634962.6190965467 577771.266940621 618151.7907360046 592686.9510656939 656041.462439494 606122.2313709205 0.9098832367470905 0.9703463905093781 1.017356851468815 0.8766319494806987 1.0475818015458618 0.9532256647868275 1.0198467548993801 0.9778340413701063 1.0823583569202975 1.0 19.20924923316926 -6.429582935061441 0.6548938476507794 1.0276045253472899 0.9496034126469857 0.24347665393687967 0.05111832306948863 1.1653193610167774 1.0658946638450173 0.03985345671961895 0.03590346574933208 3.718921959738562e-07 6.429582935061441 -0.07800111270030419 VGS(ph)LTPPSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 VGSLTPPSSPK 11 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 2 VGS(0.87)LT(0.13)PPS(0.168)S(0.832)PK 132.79 0.00060129 1431300000.0 1571000.0 1408800.0 1357400.0 1348200.0 1525600.0 1445500.0 1312500.0 1568400.0 1806200.0 1343300.0 True False 1483853.4982891413 1341119.1333480873 1444900.1759167898 1476332.522648889 1645656.0405233954 1436478.0983189987 1445180.3087655946 1562959.586467312 1478239.610596704 1331399.4070715865 1.1145066539821267 1.0073003835099186 1.085249225921505 1.108857728798365 1.2360348305569826 1.0789234925968105 1.0854596307386597 1.1739223993685277 1.1102901223668806 1.0 20.344512000199973 -5.164235126171226 3.584812032008585 1.1232319990161623 1.0589015851762653 0.08425011462364873 0.0633548874099313 0.4468393545191686 10.678371631435747 0.01717762022478214 0.03170920901317452 6.851172049305151e-06 5.164235126171226 -0.06433041383989702 VGS(ph)PATVTFQQNK ddPTM_KYSE-520_SHP099_60min_R1 1 VGSPATVTFQQNK 13 0 E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-4;Q12830;F5GXF5;Q12830-2;J3QQK4 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF 1 VGS(1)PATVTFQQNK 232.53 1.6433e-12 0.0 308560.0 335330.0 275700.0 205500.0 203130.0 229510.0 235700.0 285210.0 373720.0 283780.0 True False 291443.56170088996 319220.2434594081 293472.0631355967 225030.65821417185 219115.17534839903 228077.54295758842 259526.85621032456 284220.6730785141 305861.86871453904 281265.9299774992 1.036185085496153 1.1349410271089186 1.0433971265523485 0.8000636914402464 0.7790320547032763 0.8108964458504955 0.922709893199956 1.010505158236731 1.0874472736140046 1.0 18.10157528258413 -5.076381341814648 6.727609112442727 0.9068490304135663 1.0866380539482565 0.3535154865626581 0.09703473180131496 0.268863662321425 19.85928961292203 0.029545194710478954 0.052003978961256754 8.387232037502878e-06 5.076381341814648 0.17978902353469017 VGS(ph)PLDYSLVDLPSTNGQS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 12 VGSPLDYSLVDLPSTNGQSPGK 22 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 VGS(0.996)PLDY(0.003)SLVDLPSTNGQS(1)PGK;VGS(0.99)PLDY(0.007)S(0.002)LVDLPS(0.108)T(0.28)NGQS(0.612)PGK;VGS(0.593)PLDY(0.193)S(0.214)LVDLPS(0.051)T(0.051)NGQS(0.897)PGK;VGS(0.973)PLDY(0.022)S(0.005)LVDLPS(0.04)T(0.04)NGQS(0.92)PGK;VGS(0.997)PLDY(0.002)S(0.001)LVDLPST(0.001)NGQS(0.999)PGK;VGS(0.99)PLDY(0.009)S(0.001)LVDLPSTNGQS(1)PGK;VGS(0.949)PLDY(0.046)S(0.005)LVDLPS(0.003)T(0.01)NGQS(0.987)PGK;VGS(0.978)PLDY(0.021)S(0.001)LVDLPSTNGQS(1)PGK;VGS(0.997)PLDY(0.002)SLVDLPS(0.001)T(0.005)NGQS(0.993)PGK;VGS(0.816)PLDY(0.181)S(0.003)LVDLPSTNGQS(1)PGK;VGS(0.885)PLDY(0.112)S(0.003)LVDLPST(0.004)NGQS(0.996)PGK;VGS(0.909)PLDY(0.089)S(0.002)LVDLPSTNGQS(1)PGK 201.22 3.1084e-17 4508568000.0 1738408.0 1653900.0 1438404.0 1561907.0 1672545.0 1539495.0 1598617.0 1566395.0 1924167.0 1564702.0 True False 1641975.0428095695 1574444.1614454885 1531125.823367774 1710350.1716755352 1804164.776020715 1529886.440658325 1760220.807358423 1560961.54134434 1574786.7771027759 1550839.957599737 1.0587649839451416 1.0152202706217888 0.987288092407372 1.1028540780717793 1.163346847738598 0.9864889237353401 1.1350112555023077 1.0065265172560218 1.0154411932615548 1.0 20.56461838123621 -9.89910168479594 10.49569084674813 0.999999999770612 1.053222425675085 0.06531185801096362 0.059298913691731035 0.0 0.0 0.05806031108057614 0.014081693732814671 1.261532127531811e-10 9.89910168479594 0.053222425904473014 VGS(ph)PLDYSLVDLPSTNGQS(ph)PGKAIENLIGKPTEK ddPTM_KYSE-520_SHP099_60min_R1 1 VGSPLDYSLVDLPSTNGQSPGKAIENLIGKPTEK 34 2 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 2 VGS(1)PLDYSLVDLPSTNGQS(1)PGKAIENLIGKPTEK 194.63 9.6973e-16 292040000.0 113770.0 151510.0 135320.0 87401.0 108600.0 100770.0 70281.0 76834.0 199010.0 76269.0 True False 107458.95130512786 144231.23217885348 144042.94371965528 95707.56476193125 117146.20215052481 100141.05705126646 77385.6893564608 76567.4807871904 162874.80063384483 75593.31599638403 1.4215403820923547 1.9079892220332377 1.905498413729403 1.266085016914847 1.5496899508433848 1.324734280158535 1.0237107386605784 1.0128869170238937 2.154619075602344 1.0 16.20597105572627 -5.268105888912665 24.681972084706967 1.3294249799196505 1.761307332660575 0.22946834254850312 0.3454594838709379 617.100710163217 2284743.5500783864 0.09562751084911676 0.14560920775278702 5.393790960240304e-06 5.268105888912665 0.43188235274092457 VGS(ph)PLDYSLVDLPSTNGQSPGK ddPTM_KYSE-520_SHP099_60min_R1 1 VGSPLDYSLVDLPSTNGQSPGK 22 0 Q96T23-3;Q96T23-2;Q96T23 Q96T23-3 RSF1 Remodeling and spacing factor 1 1 VGS(0.838)PLDY(0.13)S(0.033)LVDLPSTNGQSPGK 117.48 9.340299999999999e-05 193970000.0 85506.0 102350.0 70394.0 76105.0 52456.0 103520.0 72221.0 97373.0 129060.0 93170.0 True False 80762.81172801499 97432.95236951797 74931.70987438232 83337.99631819731 56583.988766187234 102873.89328120583 79521.80348903617 97035.23579002914 105625.95733784235 92344.58628516304 0.8745809037317774 1.0551019425074026 0.8114358717574498 0.9024675909083281 0.6127483054767723 1.1140219196340104 0.8611420191268203 1.0507950676218445 1.143824035462848 1.0 16.49473976502912 -7.330716128538954 4.938882653347269 1.0785380425788964 0.8918796500063053 0.27025118643113255 0.13134766651860144 0.29576927436353145 13.893547631866088 0.07387056863344421 0.034424502743872924 4.669645064192724e-08 7.330716128538954 -0.1866583925725911 VGS(ph)PLTLTDAQTR ddPTM_KYSE-520_SHP099_60min_R1 9 VGSPLTLTDAQTR 13 0 A0A0D9SF60;Q99569-2;Q99569 A0A0D9SF60 PKP4 Plakophilin-4 1 VGS(0.974)PLT(0.025)LT(0.001)DAQTR;VGS(0.991)PLT(0.009)LTDAQTR;VGS(0.998)PLT(0.002)LTDAQTR;VGS(1)PLTLTDAQTR;VGS(1)PLTLTDAQTR;VGS(1)PLTLTDAQTR;VGS(0.889)PLT(0.109)LT(0.002)DAQTR;VGS(1)PLTLTDAQTR;VGS(0.698)PLT(0.292)LT(0.01)DAQTR 191.57 2.2567e-08 19269240000.0 11665170.0 15229700.0 10251050.0 9657760.0 11072020.0 13692040.0 10692060.0 14115870.0 17456040.0 12775540.0 True False 11018079.766160134 14498042.351754243 10911849.08525993 10575630.606688585 11943324.982823707 13606582.89955566 11772917.769249728 14066905.341638835 14286463.166958535 12662358.654819727 0.8701443440765497 1.1449717029011646 0.8617548580577052 0.8352022632578914 0.9432148708153728 1.0745693808298922 0.9297570926699784 1.1109229903454432 1.1282624001114214 1.0 23.594042829061937 -6.813341252895928 1.2484301437544907 1.0801733638588906 0.9393370103341324 0.24812727087581077 0.0971775955572231 0.6897770112842094 2.137077890004531 0.06701882729390887 0.03670046646501315 1.5369464887431008e-07 6.813341252895928 -0.1408363535247582 VGS(ph)PQPSSSGGEK ddPTM_KYSE-520_SHP099_60min_R1 2 VGSPQPSSSGGEK 13 0 V9GYB6;O94761 V9GYB6 RECQL4 ATP-dependent DNA helicase Q4 1 VGS(0.968)PQPS(0.011)S(0.011)S(0.011)GGEK;VGS(1)PQPSSSGGEK 133.16 0.004650100000000001 499240000.0 1154690.0 1150990.0 919560.0 802670.0 855780.0 1069360.0 850560.0 1127130.0 1311170.0 1044940.0 True False 1090637.0438825532 1095694.7127287893 978836.308948022 878955.515468464 923125.0172778664 1062685.72758105 936542.9054656498 1123220.2491041203 1073094.579905925 1035682.6445510183 1.0530610410637502 1.0579444567247596 0.9451122060391001 0.8486726316143904 0.8913203500460828 1.0260727387603739 0.9042759482289608 1.0845216486089237 1.0361229721785339 1.0 19.982150567259463 -7.268013582512391 24.966923463217086 1.0452417324232954 0.9595577113673367 0.2191169567974165 0.0683641282752044 862.0261702616016 3273700.8148333407 0.039674044811195984 0.019776050505984456 5.394937496433041e-08 7.268013582512391 -0.08568402105595874 VGS(ph)TENIK ddPTM_KYSE-520_SHP099_60min_R1 5 VGSTENIK 8 0 E7EVA0;H0Y2V1;H7C4C5;F8W9U4;P27816-6;P27816;P27816-2;P27816-5 E7EVA0;P27816-6 MAP4 Microtubule-associated protein;Microtubule-associated protein 4 1 VGS(0.831)T(0.169)ENIK;VGS(0.878)T(0.122)ENIK;VGS(0.974)T(0.026)ENIK;VGS(0.942)T(0.058)ENIK;VGS(0.981)T(0.019)ENIK 204.64 1.042e-06 9941450000.0 17860600.0 15782480.0 13198740.0 13205930.0 14353350.0 13357990.0 12748690.0 14102430.0 16507200.0 13696590.0 True False 16869836.913776625 15024265.970814567 14049551.899130672 14461017.61669236 15482876.9856099 13274617.829515185 14037452.000424279 14053511.96186192 13509908.59264861 13575248.86838579 1.2426908027493562 1.1067396344978446 1.0349388092508156 1.0652488036789778 1.1405225153305747 0.9778544731087238 1.0340474886699773 1.0352305212311734 0.9951868082588641 1.0 23.694475310704888 -1.0000000000000344 0.6641729980306301 1.0278929735147266 21.56610488958373 0.7006001898507674 0.04182587001273926 139.79272919930168 0.8543341373031426 0.01776496481836284 4234.279851249197 0.09999999999999208 1.0000000000000344 20.538211916069002 VGSGQGGS(ph)PCWK ddPTM_KYSE-520_SHP099_60min_R1 3 VGSGQGGSPCWK 12 0 A0A669KBI7;Q9UMN6;Q9UMN6-2 A0A669KBI7 KMT2B Histone-lysine N-methyltransferase 2B 1 VGSGQGGS(1)PCWK;VGSGQGGS(1)PCWK;VGSGQGGS(1)PCWK 145.86 2.6102e-05 2457560000.0 2683470.0 2283610.0 2142390.0 1833390.0 2357050.0 2137370.0 2059510.0 2169930.0 2577730.0 2188070.0 True False 2534612.5697351797 2173901.9478315096 2280491.8873451967 2007634.834371196 2542536.425220028 2124029.881012856 2267705.369680631 2162403.019295467 2109679.2112852666 2168685.402092703 1.1687322500946287 1.0024053953301721 1.0515549581993793 0.9257381602854434 1.1723860098687306 0.9794089446829143 1.0456589819308864 0.9971031377851421 0.9727917240783298 1.0 21.04838935458004 -4.257457161651181 24.526010946752802 1.0191560024400526 1.1687323263228506 0.3491933626845022 0.06230711775630014 338.52391984968364 2084821.6991468915 0.01466236032216188 0.10753628025725802 5.5276792969993715e-05 4.257457161651181 0.14957632388279807 VGSGS(ph)LDNLGR ddPTM_KYSE-520_SHP099_60min_R1 6 VGSGSLDNLGR 11 0 A0A2R8Y7R9;Q13136-2;Q13136;H0YDW2 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VGS(0.019)GS(0.981)LDNLGR;VGS(0.065)GS(0.935)LDNLGR;VGS(0.074)GS(0.926)LDNLGR;VGS(0.044)GS(0.956)LDNLGR;VGS(0.043)GS(0.957)LDNLGR;VGS(0.078)GS(0.922)LDNLGR 139.77 9.7337e-05 9190320000.0 16357700.0 18937400.0 15829000.0 12338300.0 14913200.0 16554600.0 12822600.0 16182800.0 19883600.0 19015900.0 True False 15450305.772733498 18027618.8783831 16849362.667295467 13510928.322354844 16086783.99549916 16451276.600782933 14118833.544516353 16126665.64389393 16273239.464766154 18847433.92014633 0.8197564633039203 0.9565025644744711 0.8939870933456309 0.7168577101582402 0.8535264834277377 0.8728655938248386 0.7491117148538985 0.8556425088009393 0.8634193669925231 1.0 24.16786477801388 -10.929079727677529 6.134839470584906 1.0578518871875382 0.8424559460715398 0.3455862244248674 0.06505849146710374 0.04366553620736712 0.0005047842938856422 0.053432088136249174 0.015776137318135475 1.1773898087390685e-11 10.929079727677529 -0.21539594111599836 VGSLT(ph)PPS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 2 VGSLTPPSSPK 11 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 2 VGSLT(1)PPS(0.796)S(0.204)PK;VGS(0.007)LT(0.993)PPS(0.701)S(0.299)PK 142.91 0.00019691 11195410000.0 2092370.0 2033570.0 1897590.0 1735980.0 1977350.0 1863490.0 1798020.0 1924410.0 2290930.0 1795460.0 True False 1976302.0650638158 1935874.2447492005 2019911.6876513476 1900967.0172585826 2132956.1954174987 1851859.267683482 1979781.4085841645 1917734.6708706708 1874954.8616456136 1779553.621246742 1.1105605593829948 1.0878426036934707 1.1350664928186949 1.0682268826082235 1.1985905734737936 1.0406313389905515 1.1125157370628396 1.07764927562403 1.053609646407864 1.0 20.763083973900596 -7.973049251604398 0.7831454879020454 0.9996092316727545 1.1116357165613318 0.43685210561234544 0.03915352481913731 0.6163096907500143 0.8661083508142327 0.03567596479000567 0.013454983390036835 1.0640223448531226e-08 7.973049251604398 0.11202648488857725 VGSLT(ph)PPSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 VGSLTPPSSPK 11 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 2 VGS(0.013)LT(0.986)PPS(0.277)S(0.724)PK;VGSLT(0.999)PPS(0.429)S(0.571)PK;VGSLT(0.999)PPS(0.11)S(0.891)PK;VGSLT(1)PPS(0.287)S(0.713)PK 124.48 0.00045194 20304400000.0 7700500.0 7123800.0 6460200.0 6569300.0 6830000.0 6693900.0 6442300.0 6637800.0 8204300.0 6210600.0 True False 7273337.914433829 6781561.954958193 6876634.828685468 7193644.29686794 7367482.142615887 6652120.887123867 7093550.554789028 6614775.021074173 6714605.933572452 6155578.915773681 1.1815847077836803 1.1016936096100447 1.1171386026851315 1.1686381403435855 1.196878838436577 1.0806653570922138 1.1523774858302593 1.0745983621660347 1.090816318895086 1.0 22.553463114033978 -8.003352866184986 0.6986382118178649 1.000422501963367 1.1459540758059006 0.6120277232100133 0.03534158095789213 0.5249114543551738 0.5927663056106047 0.035158681043472514 0.014033805131689147 9.923094649653127e-09 8.003352866184986 0.14553157384253357 VGSLT(ph)PPSSPK ddPTM_KYSE-520_SHP099_60min_R1 1 VGSLTPPSSPK 11 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 VGS(0.002)LT(0.904)PPS(0.09)S(0.003)PK 80.737 0.045067 497810000.0 1077600.0 1308500.0 846580.0 826790.0 920940.0 1293900.0 945220.0 1166500.0 1283800.0 1377900.0 True False 1017823.3798576584 1245637.6959014584 901151.9013758923 905367.873016523 993412.7385681815 1285824.2901521642 1040772.0620582211 1162453.6837631462 1050694.2819643742 1365692.8779899792 0.7452798475127779 0.9120921079523988 0.659849601545996 0.662936658459433 0.7274056668072268 0.9415178997232779 0.762083539302061 0.851182357686481 0.7693488769676983 1.0 20.38120165088909 -6.228821213656782 24.523820517479763 0.8491040195089097 0.7420872031058787 0.2961649663214003 0.0934895380773865 789.132368498121 593305.7442346374 0.031177829872884488 0.031175236409725787 5.904440987226055e-07 6.228821213656782 -0.10701681640303096 VGSVGHKMNLT(ph)GNDQEGRESK ddPTM_KYSE-520_SHP099_60min_R1 1 VGSVGHKMNLTGNDQEGRESK 21 2 Q8IWI9-3;Q8IWI9 Q8IWI9-3 MGA MAX gene-associated protein 1 VGS(0.451)VGHKMNLT(0.549)GNDQEGRESK 57.578 0.030951999999999997 2254800000.0 1061900.0 981490.0 920280.0 559450.0 965630.0 906070.0 925810.0 858190.0 1170600.0 828560.0 True False 1002994.2901548324 934337.7471534746 979602.7213000619 612619.9597952248 1041619.5873168627 900414.8810403993 1019399.9098348768 855213.1391930521 958048.5484245957 821219.6030099264 1.2213472334058602 1.1377440866352297 1.1928632946773692 0.7459879885354124 1.2683812995928596 1.09643617582947 1.2413243742582152 1.0413939658265985 1.1666167550228528 1.0 19.647408540299864 -9.180483585796006 0.009406865971988443 8.294055655863298e-05 2.157946264692291 0.04095615768808736 0.1436118570345472 21184.41150014478 54.779064736545834 6521.30989614482 6044.7025252668345 6.599581769784435e-10 9.180483585796006 2.1578633241357323 VGT(ph)PSQGPFLR ddPTM_KYSE-520_SHP099_60min_R1 2 VGTPSQGPFLR 11 0 H0YAU4;H3BLZ3;Q8IX03-2;H0YBE8;Q8IX03 H0YAU4 WWC1 Protein KIBRA 1 VGT(0.94)PS(0.06)QGPFLR;VGT(0.977)PS(0.023)QGPFLR 81.431 0.04052 517300000.0 522270.0 598110.0 504810.0 385210.0 385710.0 499020.0 443820.0 533630.0 715560.0 588990.0 True False 493298.6419805663 569375.8978185868 537350.8603245578 421820.24258239014 416063.1826103037 495905.4310779298 488685.65686578763 531778.9620801781 585632.3417996789 583772.006827286 0.8450193503823026 0.9753395009689829 0.9204806911605435 0.7225770294723798 0.7127152000171183 0.8494847736415146 0.8371173183204201 0.9109360432856616 1.0031867491942676 1.0 19.15504550648335 -7.558018172395806 2.3598873960603832 1.0056916293762284 0.8368883966680853 0.43767799521342465 0.07422185234838063 0.33645199886793775 3.479447034209192 0.07217983682097051 0.023304620117250232 2.766825869345097e-08 7.558018172395806 -0.16880323270814301 VGTEGLVDS(ph)FSQGLER ddPTM_KYSE-520_SHP099_60min_R1 2 VGTEGLVDSFSQGLER 16 0 T1ECW5;O75170-6;O75170-2;O75170-4;O75170-3;O75170-5;O75170 T1ECW5 PPP6R2 Serine/threonine-protein phosphatase 6 regulatory subunit 2 1 VGTEGLVDS(0.998)FS(0.002)QGLER;VGTEGLVDS(0.997)FS(0.003)QGLER 94.007 0.0017012999999999998 163365000.0 120355.0 174554.0 128706.0 98481.0 108392.0 119153.0 113760.0 129868.0 177611.0 123833.0 True False 113678.66822825563 166168.16382910445 137002.5946968811 107840.60463060782 116921.83373388315 118409.32192943877 125259.97099060887 129417.51821941906 145361.31960895334 122735.9359606161 0.9262052498196877 1.3538672478321672 1.1162386437566496 0.8786392003822912 0.9526291775817101 0.9647485962663317 1.0205647597033252 1.0544386793200238 1.184341965303441 1.0 16.90519819321442 -5.014876877188166 24.572830899773756 1.0058979198693245 1.1637904028569233 0.17624634949812357 0.1215524181953505 747.6918130420156 1235004.2994515197 0.03224197149763043 0.05855171065838223 9.663247939653596e-06 5.014876877188166 0.15789248298759873 VGVAAPPFLGS(ph)PVPFGGFR ddPTM_KYSE-520_SHP099_60min_R1 2 VGVAAPPFLGSPVPFGGFR 19 0 Q9BRQ0;Q5T171 Q9BRQ0 PYGO2 Pygopus homolog 2 1 VGVAAPPFLGS(1)PVPFGGFR;VGVAAPPFLGS(1)PVPFGGFR 116.43 3.7998000000000004e-05 503850000.0 416880.0 432420.0 385520.0 295670.0 317070.0 346320.0 283045.0 356000.0 418390.0 354880.0 True False 393754.83537032316 411645.89412434766 410371.2360538093 323770.3879035729 342021.60511847975 344158.4884191189 311657.9508529967 354765.1190910248 342420.9227536019 351736.0392924618 1.1194611623033701 1.1703261768467004 1.166702271621912 0.9204925049899819 0.9723814648236694 0.9784567117757237 0.8860563491870649 1.0086117982241916 0.9735167412540443 1.0 18.424133637221335 -5.25640004072904 24.9922417448701 0.9610022081791133 1.1539795146010015 0.8502681671290359 0.03640986580305884 144.38274803341722 716054.3630054346 0.009842440786989528 0.01638560634003787 5.541150670056206e-06 5.25640004072904 0.19297730642188815 VGVNGFGR ddPTM_KYSE-520_SHP099_60min_R1 2 VGVNGFGR 8 0 P04406 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 174.64 0.00067101 4024300000.0 976690.0 1144060.0 763000.0 639300.0 984680.0 970910.0 853360.0 972080.0 927700.0 897130.0 False True 922511.0587167554 1089097.6403309298 812184.2008431633 700058.8797874455 1062168.7139371906 964850.1905492224 939625.9567910156 968708.0813651766 759253.0654138868 889182.1261565792 1.0374826838954105 1.224830783585889 0.913405900716613 0.7873065136986005 1.194545732186872 1.0850984991339316 1.05673059449865 1.0894371950011434 0.8538780111288328 1.0 19.76211942284171 -7.12930523493094 0.00863041379782089 8.982992186685774e-08 2.0428958855063244 0.02319335538814593 0.13128820432399255 8776.310737725868 65.95986499954111 7755.776205177814 7848.448099740183 7.424971056717423e-08 7.12930523493094 2.0428957956764027 VGVSSKPDS(ph)SPVLSPGNK ddPTM_KYSE-520_SHP099_60min_R1 2 VGVSSKPDSSPVLSPGNK 18 1 Q8N4C8;Q8N4C8-4 Q8N4C8 MINK1 Misshapen-like kinase 1 1 VGVS(0.001)SKPDS(0.6)S(0.398)PVLSPGNK;VGVSSKPDS(0.5)S(0.5)PVLSPGNK 204.21 2.2829000000000003e-13 6495200000.0 6115100.0 5779700.0 4322900.0 3943500.0 4067200.0 4819100.0 4113800.0 4876000.0 6641300.0 4939800.0 True False 5775883.212850376 5502034.536493435 4601561.05088455 4318289.054343486 4387265.500797554 4789022.2093456155 4529663.050818974 4859086.294066952 5435407.333548828 4896037.215106245 1.1797057414166403 1.1237730218874653 0.9398541818037827 0.8819967791543387 0.8960849985496585 0.9781425260758956 0.9251692443928206 0.992452892121554 1.1101646279931061 1.0 22.223183093417887 -4.680219575325342 4.4396235398188475 0.9586847645670171 1.1653571662328044 0.5957506890509292 0.06169295985624501 0.14025030467795271 4.99087295202085 0.01704982529741534 0.048325601172708496 2.0882400687937912e-05 4.680219575325342 0.20667240166578726 VGVSSKPDSS(ph)PVLS(ph)PGNK ddPTM_KYSE-520_SHP099_60min_R1 2 VGVSSKPDSSPVLSPGNK 18 1 Q8N4C8;Q8N4C8-4 Q8N4C8 MINK1 Misshapen-like kinase 1 2 VGVSSKPDS(0.136)S(0.864)PVLS(1)PGNK;VGVSSKPDS(0.115)S(0.884)PVLS(1)PGNK 164.27 1.6352e-08 2057200000.0 5638600.0 5285500.0 4949100.0 5458100.0 5681800.0 5761600.0 5987500.0 6632400.0 8256600.0 5981900.0 True False 5325815.617729573 5031576.646302757 5268126.904839976 5976836.182962398 6128925.334980218 5725639.717243003 6592774.932368764 6609393.752413792 6757409.5719481595 5928905.019847781 0.8982798003848453 0.84865192298728 0.8885497216103538 1.008084319609466 1.0337364681105268 0.9657162154016093 1.1119717570611423 1.1147747738052787 1.1397398928346552 1.0 22.499334254482964 -5.581953127207694 0.779382078181104 1.0929904123934828 0.8491026628067545 0.7166784769598595 0.051409060962628116 0.3971718152150261 0.49548641383986525 0.027848345445132285 0.06101545377001494 2.6184656002764454e-06 5.581953127207694 -0.24388774958672832 VGVSSKPDSS(ph)PVLSPGNK ddPTM_KYSE-520_SHP099_60min_R1 4 VGVSSKPDSSPVLSPGNK 18 1 Q8N4C8;Q8N4C8-4 Q8N4C8 MINK1 Misshapen-like kinase 1 1 VGVSSKPDS(0.296)S(0.704)PVLSPGNK;VGVSSKPDS(0.184)S(0.816)PVLSPGNK;VGVSSKPDS(0.214)S(0.786)PVLSPGNK;VGVSSKPDS(0.135)S(0.865)PVLSPGNK 197.92 6.365100000000001e-13 11416700000.0 12853200.0 12520400.0 9359300.0 8563760.0 8978160.0 10833300.0 8850140.0 10689300.0 13488400.0 10790600.0 True False 12140207.373781027 11918901.190496452 9962615.453409461 9377657.175611679 9684690.113257427 10765685.356291398 9744798.520242859 10652221.31320137 11039246.574893488 10695003.678959766 1.1351288637389068 1.1144363806012012 0.9315205260760098 0.8768259887614908 0.9055340609475502 1.0066088502120558 0.9111542934214935 0.9959997801737496 1.0321872629750422 1.0 23.350433642985283 -4.747553458700147 11.781085699684809 0.9526956635363948 1.1249380416357375 0.6529457377175316 0.04868973872762051 0.2996302984049323 246.90430831217824 0.013228563576359827 0.033320305773138846 1.788325384853837e-05 4.747553458700147 0.17224237809934273 VGWEQLLTTIAR ddPTM_KYSE-520_SHP099_60min_R1 2 VGWEQLLTTIAR 12 0 P12814-3;P12814;P12814-2;P12814-4;H9KV75;H7C5W8;H0YJ11;H0YJW3;O43707;O43707-2;F5GXS2;O43707-3;H7C144 P12814-3;O43707 ACTN1;ACTN4 Alpha-actinin-1;Alpha-actinin-4 0 ; 191.52 5.8826e-07 343730000.0 242300.0 329620.0 238760.0 219251.0 334860.0 327490.0 208141.0 226790.0 217311.0 211320.0 False True 228859.13598692525 313784.560430293 254150.85162950694 240088.5491197829 361211.5769072263 325446.01343375276 229181.92354040366 226003.31842318404 177852.80036451135 209447.86920447234 1.0926782729095361 1.498151122864671 1.2134325003869748 1.146292631343973 1.7245894087115083 1.5538282374027776 1.0942194084422319 1.07904329264171 0.8491506790688976 1.0 17.67623168161199 -6.92679121739087 5.4899883085637855 0.9933400879295629 1.3751792679978303 0.48064975804922905 0.18881573635418397 0.19031246268863403 10.217072754013957 0.08522352506678303 0.056582943431615906 1.1836104275241835e-07 6.92679121739087 0.38183918006826745 VHDRS(ph)EEEEEEEEEEEEEQPR ddPTM_KYSE-520_SHP099_60min_R1 7 VHDRSEEEEEEEEEEEEEQPR 21 1 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR;VHDRS(1)EEEEEEEEEEEEEQPR 357.08 2.6367999999999993e-78 11219810000.0 2294938.0 2330308.0 1992006.0 2115449.0 1921709.0 2053427.0 1979643.0 2146191.0 2434807.0 1848969.0 True False 2167633.2142945165 2218356.505816378 2120413.8940822897 2316500.6369270682 2072936.565271485 2040610.8004129303 2179764.6338938274 2138746.364345745 1992707.4252896302 1832588.5731361134 1.182825892330563 1.210504386164593 1.1570594323054302 1.2640593043548423 1.1311521831242588 1.1135127820429591 1.1894457194849746 1.1670630253279946 1.0873730495216964 1.0 20.805451498071328 -9.070316748171994 0.2892266198123046 0.942262219685789 1.2060177347452476 0.6649967322410033 0.03999659054930672 3.8718528708746485 0.4742977644651242 0.28976856217403624 0.05534810306716093 8.505174958303975e-10 9.070316748171994 0.2637555150594586 VHDRS(ph)EEEEEEEEEEEEEQPRR ddPTM_KYSE-520_SHP099_60min_R1 2 VHDRSEEEEEEEEEEEEEQPRR 22 2 Q5TAQ8;V9GY54;Q5TAQ9-2;Q5TAQ9;V9GYQ9 Q5TAQ8 DCAF8 DDB1- and CUL4-associated factor 8 1 VHDRS(1)EEEEEEEEEEEEEQPRR;VHDRS(1)EEEEEEEEEEEEEQPRR 429.52 9.115399999999997e-125 384130000.0 98932.0 87775.0 90371.0 75483.0 66426.0 75316.0 62518.0 70590.0 90851.0 75921.0 True False 93444.04474394741 83558.15724703888 96196.45925871252 82656.88162520861 71653.34828776032 74845.9249069483 68837.92955688186 70345.13976582976 74354.74856733554 75248.39900564429 1.2418077457958712 1.110431030443203 1.278385461084653 1.098453690941765 0.9522242231676676 0.9946513931988668 0.9148092247347139 0.9348390224296104 0.988123993996979 1.0 16.199373266788054 -5.590802819006288 3.4631326600064005 0.9598593649335194 1.20027921917246 0.8422041569856021 0.047902975175121175 0.08353230370397505 2.021990814562874 0.01395647678874088 0.018939074739214523 2.565648643350715e-06 5.590802819006288 0.24041985423894063 VHDYDMR ddPTM_KYSE-520_SHP099_60min_R1 4 VHDYDMR 7 0 J3QR07;Q96MU7-2;Q96MU7 J3QR07 YTHDC1 YTH domain-containing protein 1 0 ;;; 86.794 0.013944 1250620000.0 817120.0 775650.0 642060.0 481651.0 750660.0 771410.0 557870.0 641260.0 621090.0 672120.0 False True 771792.7247116643 738386.6097256143 683448.2149323224 527426.9662263457 809732.6713288482 766595.3440499892 614264.9438865237 639035.6187312097 508315.7124047765 666165.5397014471 1.1585599655268204 1.108413098126532 1.025943514338224 0.7917355894192916 1.2155126962762786 1.150758029893818 0.9220905424826035 0.9592745055795048 0.763047143856445 1.0 19.34552120072814 -6.858091112307086 7.248420868365636 0.9052451576739284 1.0676575656440424 0.30171975210006075 0.12197981836155788 0.3199305488536305 20.765937972014637 0.05362592159076441 0.0360992821466963 1.3864649265571128e-07 6.858091112307086 0.16241240797011391 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR 40 2 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J7T7;A0A384DVL6 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGS(0.5)S(0.5)PR 181.79 1.0214e-11 2576800000.0 618630.0 675970.0 582140.0 623400.0 565130.0 536310.0 586320.0 563960.0 761780.0 530800.0 True False 584313.360691669 643495.3865483436 619665.6758569329 682647.7485679558 609602.5158501489 532962.690355907 645590.9475317665 562003.7543892537 623459.9549110618 526097.5249561504 1.1106559772170965 1.2231484772751555 1.1778532429107724 1.2975688274238766 1.158725306493237 1.01304922580719 1.2271316949943372 1.06825013943203 1.185065363998864 1.0 19.00497073731718 -6.001409560933138 24.997809089592607 1.1082025320519404 1.205310968304454 0.2786239473350014 0.07807263115717324 73.53228432556914 1304091.8368234218 0.023141276885537784 0.02588220523509541 9.967596273839894e-07 6.001409560933138 0.09710843625251364 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 VHEPPREDAAPTKPAPPAPPPPQNLQPESDAPQQPGSSPR 40 2 C9JE98;C9J0Q5;Q9Y618-5;Q9Y618-4;Q9Y618;C9JQE8;C9J7T7;A0A384DVL6 C9JE98 NCOR2 Nuclear receptor corepressor 2 1 VHEPPREDAAPTKPAPPAPPPPQNLQPES(0.003)DAPQQPGS(0.256)S(0.741)PR 69.18 0.007316500000000001 1647800000.0 344100.0 311010.0 335050.0 314350.0 356540.0 335240.0 306370.0 338620.0 362200.0 357480.0 True False 325012.08705365646 296068.61276447226 356647.85909895407 344225.7294872261 384597.66956489964 333147.6428090359 337340.86948305974 337445.40625450254 296433.6103189719 354313.0053152317 0.9173021655372028 0.8356131678007713 1.0065898054790428 0.9715300435584323 1.0854743229724908 0.9402636590001403 0.9520984678022986 0.9523935085427585 0.8366433234795755 1.0 18.434664896030313 -4.762723113095065 24.999208474984208 0.9691692653566886 0.8764576622830482 0.2602445110047138 0.061799134425824305 43.333023542893805 843940.6991268162 0.016434331041120888 0.03752652884130437 1.726938560537498e-05 4.762723113095065 -0.09271160307364035 VHGLPTTS(ph)PSGMNMAELAQQVVK ddPTM_KYSE-520_SHP099_60min_R1 1 VHGLPTTSPSGMNMAELAQQVVK 23 0 B1AKB5;B0QYS6;B0QYS7;P19484-2;P19484 B1AKB5 TFEB Transcription factor EB 1 VHGLPT(0.303)T(0.303)S(0.385)PS(0.01)GMNMAELAQQVVK 214.02 5.1629e-21 461460000.0 229740.0 244620.0 193050.0 184410.0 193070.0 212190.0 172430.0 176640.0 263040.0 185580.0 True False 216995.8642246642 232868.0880178943 205494.3118909214 201936.27095511183 208263.51058196888 210865.64350211574 189860.90715462962 176027.27706808597 215278.56669879163 183935.90557905502 1.1797362974973917 1.2660284422706605 1.1172060791719682 1.097862161927489 1.13226131638805 1.1464082710674801 1.0322123163333548 0.9570033458879514 1.1703999065384525 1.0 17.488843605870045 -4.274980706010428 0.27016535685651993 1.0099333885974258 1.39914495692263 0.45123455128588985 0.06476503340393078 7.916852134525183 0.48702645943326067 0.08569932029464337 1.0326340847639162 5.309080298552281e-05 4.274980706010428 0.3892115683252042 VHHEPQLSDK ddPTM_KYSE-520_SHP099_60min_R1 6 VHHEPQLSDK 10 0 O43852;O43852-3;O43852-5;O43852-6;O43852-10;O43852-13;O43852-14;O43852-11;O43852-2;O43852-4;O43852-9;O43852-8;O43852-12;O43852-7 O43852 CALU Calumenin 0 ;;;;; 107.55 0.0011047000000000001 2133980000.0 2759560.0 2798180.0 1864270.0 2242170.0 2716450.0 2849070.0 2072850.0 2596410.0 2347020.0 2218200.0 False True 2606481.7057535253 2663751.232646192 1984443.827137463 2455265.162667006 2930219.1605137545 2831287.897321145 2282393.9070664896 2587403.6597166467 1920860.3315594494 2198548.4737334847 1.1855466171857039 1.2115954069107782 0.9026154532620161 1.1167664447705241 1.3327971593629575 1.2877987140821 1.0381367226307374 1.1768690527540764 0.8736947829480981 1.0 21.068119910855387 -7.754799995251471 24.993391709860216 0.9368473684907673 1.1548695726839358 0.354314087054706 0.11859947231472567 164.42781953222334 618991.8385734787 0.08980550639909246 0.0321936283455378 1.7587333733653743e-08 7.754799995251471 0.21802220419316842 VHIDIGADGR ddPTM_KYSE-520_SHP099_60min_R1 3 VHIDIGADGR 10 0 P31942-4;P31942-3;P31942;P31942-5;P31942-2;P31942-6 P31942-4 HNRNPH3 Heterogeneous nuclear ribonucleoprotein H3 0 ;; 160.53 0.00012921 1251360000.0 957150.0 993530.0 687350.0 586310.0 918110.0 884100.0 710760.0 816480.0 779070.0 776410.0 False True 904054.9814687797 945799.327481067 731657.6807988844 642032.7261194711 990360.033668677 878582.003959756 782610.5571491313 813647.8214478646 637610.5267564926 769531.6114378388 1.1748120129588822 1.2290584472727237 0.9507831386313182 0.8343162471517692 1.286964718471057 1.1417100881900888 1.0169959823831733 1.057328652071351 0.8285696354502488 1.0 19.55362106639365 -7.629487480858154 6.288742640992311 0.9161422317424466 1.0866023847394712 0.2177374582969277 0.13154292674284862 0.34361701017439594 17.636592002882256 0.0967458061657323 0.03539469797567177 2.3469969171583766e-08 7.629487480858154 0.17046015299702466 VHIEIGPDGR ddPTM_KYSE-520_SHP099_60min_R1 5 VHIEIGPDGR 10 0 P31943;G8JLB6;E9PCY7;H0YB39;H0YBD7;H0YBG7;P55795;P52597 P31943;P55795;P52597 HNRNPH1;HNRNPH2;HNRNPF Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2;Heterogeneous nuclear ribonucleoprotein F;Heterogeneous nuclear ribonucleoprotein F, N-terminally processed 0 ;;;; 164.66 0.00010703 3168890000.0 2905580.0 2799150.0 1867040.0 1769360.0 2738410.0 2736170.0 1909120.0 2297850.0 2272310.0 2277060.0 False True 2744401.6852698675 2664674.6323901922 1987392.3857696238 1937519.4424225178 2953907.2875784435 2719092.5480992706 2102112.480815675 2289879.2946722214 1859715.7842736142 2256887.0199258733 1.2160119939721248 1.180685877876914 0.8805901085092417 0.858491995973354 1.3088414535147903 1.2047978140210929 0.9314212285578737 1.0146184875251008 0.8240181133811013 1.0 21.10590276814972 -6.786062153212267 24.596362775412064 0.9437325482338129 1.0989485176629343 0.2428967520161115 0.14276473452636576 342.2980384461236 341926.9367062644 0.0651811558242634 0.043969019142980036 1.6365822883679947e-07 6.786062153212267 0.15521596942912141 VHLENMGSHDIVDGNHR ddPTM_KYSE-520_SHP099_60min_R1 1 VHLENMGSHDIVDGNHR 17 0 A0A087WUZ3;Q01082;Q01082-3;Q01082-2;F8W6C1;P11277-3;P11277;P11277-2;A4QPE4;O15020-2;O15020 A0A087WUZ3 SPTBN1;SPTB;SPTBN2 Spectrin beta chain, non-erythrocytic 1;Spectrin beta chain, erythrocytic;Spectrin beta chain, non-erythrocytic 2 0 224.64 1.2841999999999999e-18 387570000.0 88817.0 92763.0 66596.0 90944.0 92041.0 91675.0 82650.0 75802.0 64031.0 83717.0 False True 83890.14395769993 88306.52623989833 70888.88471736746 99587.29041668936 99284.10305834677 91102.82231988548 91005.06858626782 75539.06055431977 52404.58449015487 82975.33251084041 1.0110251013063432 1.0642503448643779 0.8543368561747685 1.2002035713888661 1.1965496257020203 1.0979506747741354 1.0967725688158991 0.91037972694416 0.6315682372626638 1.0 16.34039488524235 -7.43274658894845 4.184232399576331 0.8026674960201132 1.07499449209406 0.422545338271587 0.12405687299369726 0.20410666601725438 6.29876983816912 0.07671733585997971 0.0332171286058761 3.6919296001262896e-08 7.43274658894845 0.2723269960739467 VHLVGIDIFTGK ddPTM_KYSE-520_SHP099_60min_R1 3 VHLVGIDIFTGK 12 0 I3L397;I3L504;P63241;P63241-2;F8WCJ1;C9J7B5;C9J4W5;Q9GZV4;Q6IS14 I3L397 EIF5A;EIF5A2;EIF5AL1 Eukaryotic translation initiation factor 5A;Eukaryotic translation initiation factor 5A-1;Eukaryotic translation initiation factor 5A-2;Eukaryotic translation initiation factor 5A-1-like 0 ;; 152.64 6.1592e-05 683440000.0 2651070.0 2550880.0 2286370.0 2054590.0 3122680.0 2979310.0 1938280.0 2206220.0 1916200.0 1561860.0 False True 2504009.8623229796 2428331.895851058 2433753.068521341 2249857.615864989 3368417.150381222 2960715.021171066 2134220.2581898505 2198567.1377556217 1568266.38347105 1548023.1355086928 1.6175532554299596 1.5686664108240789 1.57216840801387 1.4533746713841378 2.1759475508577157 1.9125780185437289 1.3786746523581694 1.4202417827774614 1.0130768381285886 1.0 20.561995602327325 -7.461424843428719 1.5621001526027196 0.9937441106916037 1.6991381833459813 0.6142437481041529 0.21153260765747028 0.29670920630364045 1.2790073853987272 0.2018869192541423 0.06837601571212237 3.4560113219995036e-08 7.461424843428719 0.7053940726543776 VHNDAQSFDYDHDAFLGAEEAK ddPTM_KYSE-520_SHP099_60min_R1 1 VHNDAQSFDYDHDAFLGAEEAK 22 0 O43852;O43852-3;O43852-5;O43852-6;O43852-10;O43852-13;O43852-14;O43852-11;O43852-2;O43852-4;O43852-9;O43852-8;O43852-12;O43852-7 O43852 CALU Calumenin 0 117.37 0.00015817 475250000.0 160380.0 122870.0 90869.0 125020.0 135830.0 141620.0 98887.0 131810.0 105070.0 120090.0 False True 151483.40169039648 116967.14076837 96726.56113554067 136901.8632113663 146519.04823301846 140736.0970487284 108883.46300411683 131352.7818746854 85991.93659915627 119026.09602860636 1.2726906682211052 0.982701648386909 0.8126500352686835 1.1501835965321732 1.23098255862987 1.1823969847326954 0.9147864765550918 1.1035628845889096 0.7224628839249607 1.0 16.860918388168322 -7.74162511078495 24.877563055083517 0.861231367958878 1.0741188973059959 0.25674091819955713 0.14934432691789112 285.0987517715034 357954.908969212 0.10408702674934774 0.039222534707985895 1.8129043423667543e-08 7.74162511078495 0.21288752934711785 VHNNS(ph)PDTSR ddPTM_KYSE-520_SHP099_60min_R1 7 VHNNSPDTSR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 VHNNS(1)PDTSR;VHNNS(0.999)PDTSR;VHNNS(0.959)PDT(0.024)S(0.016)R;VHNNS(0.962)PDT(0.025)S(0.013)R;VHNNS(0.998)PDT(0.001)S(0.001)R;VHNNS(1)PDTSR;VHNNS(0.978)PDT(0.011)S(0.011)R 130.65 0.00033366 2548670000.0 476180.0 366460.5 342126.0 449315.0 428377.0 488140.0 486750.0 406977.0 486680.0 570400.0 True False 449765.34615870396 348855.1875115752 364179.9893809547 492017.76250851934 462087.8327682822 485093.33719366137 535955.4402222122 405565.29177614633 398311.18020440993 565346.6997644848 0.7955566846787461 0.617064161968051 0.6441710715436506 0.8702938616489435 0.8173530206522498 0.8580457574011562 0.9480119729105759 0.7173744747163093 0.7045432128114316 1.0 19.108776348390876 -5.261717026086976 24.999992666250098 0.8369855074979404 0.6787439865001874 0.3664122576272125 0.09556760769510318 27.498572759412145 2476121.667646259 0.026777716584404143 0.04269430006927406 5.473724990547956e-06 5.261717026086976 -0.15824152099775302 VHNNS(ph)PDTSRR ddPTM_KYSE-520_SHP099_60min_R1 2 VHNNSPDTSRR 11 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 VHNNS(1)PDTSRR;VHNNS(0.972)PDT(0.014)S(0.014)RR 84.169 0.0073230000000000005 545820000.0 145227.0 144312.0 137825.0 128015.0 121767.0 129044.0 114165.0 123583.0 160370.0 118178.0 True False 137170.96880715297 137379.0349032717 146709.42002779688 140181.50711088663 131349.37014054295 128238.58852955874 125705.91234302783 123154.31941748908 131250.85059871196 117131.03486109285 1.1710898735747168 1.1728662268389518 1.2525238951553823 1.1967921847282372 1.1213882836116986 1.094830150537289 1.073207561873794 1.051423472553959 1.1205471782466874 1.0 16.837763855212447 -6.000918902111394 1.9622548063167737 1.069040059105811 1.2014754828296397 0.7483183404874936 0.035648787165276 0.1701285687064856 1.3197131794223818 0.013147328791313579 0.014428676797966678 9.978863865297575e-07 6.000918902111394 0.13243542372382877 VHNNSPDT(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 2 VHNNSPDTSR 10 0 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 1 VHNNS(0.103)PDT(0.897)S(0.001)R;VHNNS(0.225)PDT(0.775)SR 163.71 0.00017529 816530000.0 1233520.0 1001110.0 889460.0 1324180.0 1068970.0 1282830.0 1245880.0 1068250.0 1210940.0 1466440.0 True False 1165094.1866388426 953015.1729032554 946796.0147863181 1450029.669070766 1153091.857392693 1274823.3821283744 1371825.7090170516 1064544.4900814248 991063.8213132408 1453448.4824730568 0.8016067997514597 0.6556924338189757 0.6514135356041897 0.9976477918250851 0.7933489706017621 0.8771025581582707 0.9438419906585728 0.7324267099375218 0.6818706223607843 1.0 20.471048505333698 -5.2343212124309275 24.99561666223821 0.8510598614691498 0.6981830599956191 0.31250448165743006 0.10661924602480984 959.5611867086618 884454.928315444 0.02920126409632995 0.050563166784452225 5.830137367588012e-06 5.2343212124309275 -0.15287680147353067 VHS(ph)ENNACINFK ddPTM_KYSE-520_SHP099_60min_R1 2 VHSENNACINFK 12 0 C9JWL6;F8WF96;C9IYJ9;O94921-3;O94921-2;O94921 C9JWL6 CDK14 Cyclin-dependent kinase 14 1 VHS(1)ENNACINFK;VHS(1)ENNACINFK 173.44 1.6824000000000002e-06 1029400000.0 940210.0 853510.0 747880.0 853140.0 890850.0 968840.0 884730.0 1034190.0 968110.0 821110.0 True False 888054.6770378317 812506.0984553704 796089.5414503088 934222.1690941058 960954.8267568599 962793.1101870504 974167.1425327136 1030602.6362717615 792325.6280670888 813835.6042139129 1.0911966402546462 0.9983663706138457 0.9781945362531231 1.1479249178296578 1.1807726545523283 1.1830314441907666 1.1970072794660607 1.2663523578170617 0.9735696299898299 1.0 19.634377872198193 -5.2756464732519435 22.647690287918646 1.1530474728292355 1.0201639135617722 0.23670644957259834 0.0890968372644433 256.4520438561894 408813.0238342062 0.024213132371557283 0.036170401644677455 5.30094778934083e-06 5.2756464732519435 -0.1328835592674633 VHS(ph)GEKPFVCNECGK ddPTM_KYSE-520_SHP099_60min_R1 1 VHSGEKPFVCNECGK 15 1 Q14592-2;Q14592 Q14592-2 ZNF460 Zinc finger protein 460 1 VHS(1)GEKPFVCNECGK 111.57 0.0001273 1166500000.0 648700.0 527630.0 565630.0 669070.0 487150.0 540900.0 462970.0 611170.0 663070.0 522210.0 True False 612715.3178486105 502281.8628112235 602091.4148399984 732658.2116367699 525485.9334956555 537524.0424633329 509771.5257517776 609049.9939181498 542673.2026344575 517583.62567323237 1.1837996556626733 0.970436153496731 1.1632736913901496 1.4155359159281466 1.0152676928528108 1.0385259807324152 0.9849065937677348 1.1767180484621111 1.0484744410694804 1.0 18.981432451246185 VHS(ph)GERPFHCNACGK ddPTM_KYSE-520_SHP099_60min_R1 3 VHSGERPFHCNACGK 15 1 Q96K58;Q96K58-2 Q96K58 ZNF668 Zinc finger protein 668 1 VHS(1)GERPFHCNACGK;VHS(1)GERPFHCNACGK;VHS(1)GERPFHCNACGK 141.07 7.115e-06 1876500000.0 1885520.0 1645370.0 1786820.0 1792880.0 1688730.0 1614820.0 1719600.0 1701790.0 1976030.0 1488660.0 True False 1780926.446909067 1566323.9554492799 1902001.276213084 1963274.7761509733 1821623.4434406601 1604741.3093929333 1893433.9496787174 1695886.887690771 1617232.763662613 1475471.6305599553 1.2070218159553423 1.0615751079231834 1.2890802078595418 1.3306082851663452 1.2346041805963677 1.0876124461870669 1.283273707512859 1.1493863064294676 1.0960785217190914 1.0 20.492744751128363 -7.888516481187298 1.6958730714258214 1.0022522902879625 1.2116889172697616 0.41672454241991397 0.08065502924182062 0.35740454358528473 2.2343129200263454 0.08024446006058253 0.02343178173124145 1.2926576443764184e-08 7.888516481187298 0.2094366269817991 VHS(ph)GERPYACEHCEAR ddPTM_KYSE-520_SHP099_60min_R1 1 VHSGERPYACEHCEAR 16 1 Q96CS4 Q96CS4 ZNF689 Zinc finger protein 689 1 VHS(1)GERPYACEHCEAR 81.665 0.0041843 23489000.0 9237.9 9872.4 9669.3 9954.1 9051.9 10437.0 10869.0 9378.7 11497.0 9398.7 True False 8725.45527170291 9398.115085225489 10292.598549427006 10900.1346711907 9764.233031734224 10371.858811591426 11967.744591217723 9346.167478705032 9409.434615784705 9315.434830077958 0.9366664499149191 1.0088756195127435 1.104897273951609 1.1701154986341609 1.048177912233058 1.113405761597135 1.2847220564064177 1.0032991104749982 1.010090756622894 1.0 13.185407398172053 -4.566087642879025 2.925774355409522 1.1009306931941587 0.9424239734120384 0.25902766905092756 0.0835106253018954 0.35348690927044396 5.747073677942227 0.022590153803987264 0.09421478500788427 2.7158911326153653e-05 4.566087642879025 -0.15850671978212028 VHS(ph)PCPTSGSEK ddPTM_KYSE-520_SHP099_60min_R1 4 VHSPCPTSGSEK 12 0 Q96LT9-2;Q96LT9;X6RLP6 Q96LT9-2 RNPC3 RNA-binding protein 40 1 VHS(0.998)PCPT(0.002)SGSEK;VHS(0.478)PCPT(0.478)S(0.04)GS(0.003)EK;VHS(0.999)PCPT(0.001)SGSEK;VHS(1)PCPTSGSEK 183.06 8.9452e-08 4082960000.0 6111790.0 5247220.0 4818120.0 6170490.0 5344800.0 5577980.0 5545350.0 5893190.0 5979880.0 5392510.0 True False 5772756.8251487 4995135.674962206 5128703.72446457 6756931.514374536 5765405.352247932 5543165.7577733705 6105928.095400605 5872747.899370881 4894084.532507488 5344736.556709294 1.080082575426867 0.9345896887456069 0.9595802655654682 1.264221621155958 1.0787071151356504 1.0371260957315074 1.1424189070153103 1.098790901489573 0.9156830239581969 1.0 22.349687408252965 VHS(ph)PPASLVPR ddPTM_KYSE-520_SHP099_60min_R1 9 VHSPPASLVPR 11 0 Q9BTE3;Q9BTE3-2;Q9BTE3-3 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VHS(1)PPASLVPR;VHS(1)PPASLVPR;VHS(1)PPASLVPR;VHS(1)PPASLVPR;VHS(1)PPASLVPR;VHS(1)PPASLVPR;VHS(0.692)PPAS(0.308)LVPR;VHS(1)PPASLVPR;VHS(1)PPASLVPR 176.99 4.3994e-06 8897440000.0 3742110.0 3850374.0 3450409.0 3245126.0 3321790.0 3622641.0 3187402.0 3437177.0 4053501.0 3600212.0 True False 3534527.6985886553 3665396.2535108007 3672827.8849895927 3553541.7993572876 3583195.9746002997 3600030.753768552 3509615.7002057754 3425254.235230141 3317487.3988447306 3568316.9226025534 0.9905307670964232 1.0272059161262623 1.029288587492059 0.9958593579085768 1.0041697675179855 1.008887616165794 0.9835493248862087 0.9599075164915369 0.929706489306202 1.0 21.766812324257888 -6.97867008047816 2.4056343772544535 0.9586632982806205 1.0105463945467117 0.5261484490541951 0.01961280317337626 0.21572584932056835 2.497121681582673 0.010338485219594937 0.00578528258225952 1.0503400351312462e-07 6.97867008047816 0.05188309626609122 VHS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 VHSPPR 6 0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 VHS(1)PPR 79.809 0.025481999999999998 1885000000.0 941400.0 891810.0 824520.0 808290.0 907560.0 886460.0 856740.0 919810.0 1142400.0 887120.0 True False 889178.6653656266 848966.1089658999 877669.8784786437 885109.638578751 978979.8086899671 880927.2743243598 943347.6401766369 916619.3937952674 934968.9575604465 879260.8069689155 1.0112797685488804 0.9655452651103024 0.9981906068396745 1.006651987173178 1.113412312854947 1.0018953049450585 1.0728871714737844 1.0424886296878608 1.0633579367464066 1.0 19.745931636519007 -5.541250301565329 24.994160068211766 1.050884532330765 0.9912862159904257 0.39639021829352405 0.0327400455176566 214.39377433859252 291677.2950239413 0.008984467818534698 0.011600840448883478 2.8757405308529818e-06 5.541250301565329 -0.0595983163403393 VHSFPTLK ddPTM_KYSE-520_SHP099_60min_R1 2 VHSFPTLK 8 0 H7BZ94;P07237;H0Y3Z3;I3L0S0 H7BZ94 P4HB Protein disulfide-isomerase 0 ; 133.55 0.0012879 712780000.0 788940.0 701030.0 566180.0 590860.0 785990.0 769650.0 563560.0 657910.0 653140.0 600980.0 False True 745175.9254871004 667351.4665325179 602676.86872003 647015.1567514634 847842.9413286464 764846.3288628289 620530.1446155729 655627.8637673476 534546.2403195282 595655.7847553656 1.25101769269838 1.1203642835544652 1.0117871498008668 1.0862232405200112 1.4233773313841878 1.2840407974497376 1.0417596210711244 1.1006824420191141 0.8974079560715843 1.0 19.184119346928355 -7.284043672853214 1.8651581324051119 0.9672380136679577 1.1845834494079592 0.3668665276333847 0.11785396717364185 0.45971119088565526 2.943811733529062 0.09771246638731916 0.038302888243128115 5.1994370812561904e-08 7.284043672853214 0.21734543574000154 VHT(ph)GEKPYK ddPTM_KYSE-520_SHP099_60min_R1 3 VHTGEKPYK 9 1 Q9NZL3;F8VS19;Q76KX8;A0A3Q5AD24;K7ENM7;K7EIK6;K7EPV5;M0QXU9;P35789-2;Q8N8E2-3;B4DX44;A6NK53;Q9H7R5;A0A1W2PPT3;Q02386;P17020;Q14588;P52740;Q9UK10;Q14590-2;Q14590;Q08AN1;Q9NYT6;Q6ZN19;Q9Y2L8;Q9UJU3-2;Q9UJU3;Q76KX8-2;Q9UL59;Q96NJ3-2;Q09FC8;Q9UK12;Q9UK11;Q9UK12-2;Q09FC8-4;P17022-2;P17022;Q09FC8-6;Q09FC8-5;P17028;Q09FC8-2;Q9P2F9;P0C7X5;P52740-2;Q96NJ3;Q6AZW8;Q09FC8-3;Q8N3J9;Q6ZN19-3;Q86YE8-2;Q86YE8-4;Q86YE8-3;Q86YE8;Q86WZ6-2;Q86WZ6;Q14586;P17040-2;P17040-3;P17040;P59923;Q14593-2;Q14593;A0A087WWD1;B7Z6K7 Q9NZL3;Q86YE8-2;Q14586;P17040-2;P59923;Q14593-2;A0A087WWD1 ZNF224;ZNF844;ZNF534;ZNF285;ZNF45;ZNF160;ZNF736;ZNF233;ZNF665;ZNF16;ZNF234;ZNF132;ZNF225;ZNF235;ZNF616;ZNF226;ZNF841;ZKSCAN5;ZNF112;ZNF214;ZNF415;ZNF222;ZNF223;ZNF18;ZNF24;ZNF319;ZNF806;ZNF660;ZNF664;ZNF573;ZNF227;ZNF267;ZSCAN20;ZNF445;ZNF273;ZNF814 Zinc finger protein 224;Zinc finger protein 534;Zinc finger protein 736;Zinc finger protein 233;Zinc finger protein 665;Zinc finger protein 45;Zinc finger protein 16;Zinc finger protein 234;Zinc finger protein 132;Zinc finger protein 225;Zinc finger protein 235;Zinc finger protein 616;Zinc finger protein 226;Zinc finger protein 841;Zinc finger protein with KRAB and SCAN domains 5;Zinc finger protein 112;Zinc finger protein 214;Zinc finger protein 285;Zinc finger protein 415;Zinc finger protein 222;Zinc finger protein 223;Zinc finger protein 18;Zinc finger protein 24;Zinc finger protein 319;Zinc finger protein 806;Zinc finger protein 660;Zinc finger protein 664;Zinc finger protein 573;Zinc finger protein 227;Zinc finger protein 267;Zinc finger and SCAN domain-containing protein 20;Zinc finger protein 445;Zinc finger protein 273;Putative uncharacterized zinc finger protein 814 1 VHT(1)GEKPYK;VHT(1)GEKPYK;VHT(1)GEKPYK 100.93 0.0049977 2735000000.0 3657630.0 3363970.0 3417670.0 3200650.0 3132860.0 2939130.0 3216560.0 3456490.0 4122820.0 3194630.0 True False 3454733.972595361 3202359.831778089 3637978.47666534 3504838.81368949 3379398.258464949 2920785.7994550806 3541721.2754004314 3444500.2429408343 3374219.81583452 3166328.0635845326 1.0910852897170518 1.0113796699110091 1.1489581634023298 1.106909563161859 1.0672925201058303 0.9224520456507975 1.1185579018590146 1.08785324002131 1.0656570475564169 1.0 21.594379310328815 -6.002466439860673 24.981505943459016 1.043317582414548 1.088096131660425 0.14005880576569252 0.058805574375807884 234.7717498631057 2377944.634685244 0.019102586672132875 0.021272535976502315 9.943369084449218e-07 6.002466439860673 0.044778549245876986 VHT(ph)PHLDR ddPTM_KYSE-520_SHP099_60min_R1 2 VHTPHLDR 8 0 P08581;P08581-2 P08581 MET Hepatocyte growth factor receptor 1 VHT(1)PHLDR;VHT(1)PHLDR 116.77 0.001324 1334440000.0 766750.0 925000.0 895010.0 1071680.0 1291740.0 1150240.0 1017260.0 1314000.0 1504730.0 866010.0 True False 724216.8490217694 880561.6115466935 952703.7766666319 1173532.144987659 1393392.5890047804 1143060.9255001366 1120094.5683008668 1309442.0406899056 1231508.9631564505 858337.825145585 0.8437433698077246 1.0258916544862031 1.1099403390559437 1.3672147616104569 1.6233615112656177 1.3317144975013293 1.3049577165155042 1.5255555590455396 1.4347602157082744 1.0 19.711186050760976 -4.9897553062936435 1.8947540124230522 1.3994140973350797 0.9034812100987701 0.5543288612533794 0.15936131625892702 0.24324696653503017 1.6943973648197541 0.04546009276690802 0.12744043479171743 1.0238697067405965e-05 4.9897553062936435 -0.49593288723630957 VHVGDEDFVHLR ddPTM_KYSE-520_SHP099_60min_R1 10 VHVGDEDFVHLR 12 0 P04080 P04080 CSTB Cystatin-B 0 ;;;;;;;;; 206.1 8.8779e-09 11547320000.0 7297300.0 6608770.0 4483139.0 4136278.0 7146820.0 6150220.0 4513547.0 5583210.0 5191300.0 5073950.0 False True 6892504.222193092 6291274.769233986 4772129.313216023 4529388.617502671 7709234.074156667 6111834.19567172 4969820.37873373 5563843.147641004 4248690.782023409 5028998.750473366 1.3705519854313584 1.2509994695548106 0.9489223501530668 0.9006541544828046 1.5329560528188673 1.2153182967278386 0.9882325737833866 1.1063520640400426 0.8448383053631683 1.0 22.26183976428271 -6.763998729960347 24.907208031482263 0.9937183647218027 1.195079055352717 0.2559245489624775 0.1818484715640222 110.3071908292191 1073467.4423642766 0.07864190353994974 0.055788769797793895 1.7218736103817023e-07 6.763998729960347 0.20136069063091433 VHVQFFDDS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 15 VHVQFFDDSPTR 12 0 P52701-2;P52701;A0A087WWJ1;A0A494C0M1;F8WAX8;C9J7Y7;C9JH55;C9J8Y8 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 VHVQFFDDS(0.975)PT(0.025)R;VHVQFFDDS(0.979)PT(0.021)R;VHVQFFDDS(0.997)PT(0.003)R;VHVQFFDDS(0.77)PT(0.23)R;VHVQFFDDS(0.967)PT(0.033)R;VHVQFFDDS(0.964)PT(0.036)R;VHVQFFDDS(0.981)PT(0.019)R;VHVQFFDDS(0.99)PT(0.01)R;VHVQFFDDS(0.993)PT(0.007)R;VHVQFFDDS(0.997)PT(0.003)R;VHVQFFDDS(1)PTR;VHVQFFDDS(0.993)PT(0.007)R;VHVQFFDDS(0.98)PT(0.02)R;VHVQFFDDS(1)PTR;VHVQFFDDS(0.953)PT(0.047)R 273.84 3.8213000000000003e-22 18400310000.0 8996240.0 8847770.0 8286540.0 7644490.0 8224460.0 8410220.0 7771780.0 7705050.0 9331080.0 8179350.0 True False 8497200.633640172 8422709.848426467 8820703.627332782 8371020.031200266 8871678.21122381 8357728.697367292 8557427.367663456 7678322.97992219 7636791.089384727 8106887.322438017 1.048145890731928 1.038957310423487 1.0880506014829001 1.0325812729666526 1.0943384135448666 1.0309417616099095 1.0555749731439397 0.9471357716629836 0.9420127338205169 1.0 22.950716660526982 -7.257255765393876 24.66661336836417 0.9584306856204554 1.0557938509752158 0.7441765004324224 0.024798734645414384 129.00322927902647 760608.7645350863 0.0114763635125699 0.006319570021863138 5.530243253333256e-08 7.257255765393876 0.09736316535476042 VIAHTQMR ddPTM_KYSE-520_SHP099_60min_R1 1 VIAHTQMR 8 0 H7C422;P39023;H7C3M2;B5MCW2;G5E9G0 H7C422 RPL3 60S ribosomal protein L3 0 133.55 0.0012879 36537000.0 24384.0 20392.0 18693.0 20951.0 21136.0 23420.0 19074.0 18545.0 20654.0 18637.0 False True 23031.370911701102 19412.337710983964 19897.980689857483 22942.176740852163 22799.282952610458 23273.827092792104 21002.186064300928 18480.671723435542 16903.754244969754 18471.890679366592 1.2468334352707882 1.0509123320369076 1.0772032508877858 1.2420047919880208 1.2342690495715003 1.2599591182503778 1.1369808553360874 1.0004753733237908 0.9151068798740525 1.0 14.17304391961894 -7.263786919993922 3.188779338180211 0.9587550313839809 1.1800196879412623 0.6516914521049362 0.07009122119552236 0.17391303861706153 3.6466998052891335 0.04557134934204518 0.021282118508764197 5.4476987036518705e-08 7.263786919993922 0.22126465655728145 VIAIDS(ph)DAES(ph)PAKR ddPTM_KYSE-520_SHP099_60min_R1 1 VIAIDSDAESPAKR 14 1 P28749 P28749 RBL1 Retinoblastoma-like protein 1 2 VIAIDS(1)DAES(1)PAKR 97.50200000000001 0.0011347000000000002 920850000.0 619870.0 671380.0 610710.0 546020.0 597640.0 612770.0 524160.0 546640.0 640110.0 603720.0 True False 585484.5754197899 639125.8970380748 650077.3437705492 597913.5766331016 644670.8678935511 608945.475134509 577147.2081086278 544743.8334267354 523882.1598599584 598371.5104870532 0.9784633211284177 1.0681088351246018 1.0864109209367425 0.9992346997710856 1.077375604611944 1.0176712367854028 0.9645298915365313 0.910377288824017 0.8755132065588097 1.0 19.190681962066286 -6.84103974767771 2.4081753571928872 0.9209652089502268 1.0436994235563428 0.5759850369129271 0.04299995301063404 0.19100601537268436 2.252097376369079 0.020535650978657814 0.012825146211724488 1.4419833716917925e-07 6.84103974767771 0.122734214606116 VIAIDS(ph)DAESPAKR ddPTM_KYSE-520_SHP099_60min_R1 1 VIAIDSDAESPAKR 14 1 P28749 P28749 RBL1 Retinoblastoma-like protein 1 1 VIAIDS(1)DAESPAKR 119.92 0.00037863 0.0 132400.0 124290.0 143440.0 147260.0 148720.0 127480.0 149660.0 139560.0 189290.0 144900.0 True False 125055.50806714337 118318.92183690655 152686.37191211464 161255.54612466652 160423.4178989508 126684.35003369508 164789.09334084493 139075.89893354877 154919.70761258458 143616.29873049408 0.8707612518396585 0.823854415430523 1.0631549013711958 1.1228220442254517 1.1170279370588463 0.8821028751856851 1.1474261264042396 0.9683852053208412 1.0787056133740234 1.0 17.131859961503917 -4.763069534600264 24.999986016986387 1.0491656686996358 0.8473077850083558 0.5218392139256265 0.07662038802262425 29.64898193964957 454728.33604556427 0.019380107679140824 0.04407378726026475 1.7255615913544433e-05 4.763069534600264 -0.20185788369128 VIAIDSDAES(ph)PAKR ddPTM_KYSE-520_SHP099_60min_R1 8 VIAIDSDAESPAKR 14 1 P28749 P28749 RBL1 Retinoblastoma-like protein 1 1 VIAIDS(0.002)DAES(0.998)PAKR;VIAIDSDAES(1)PAKR;VIAIDSDAES(1)PAKR;VIAIDSDAES(1)PAKR;VIAIDSDAES(1)PAKR;VIAIDSDAES(1)PAKR;VIAIDS(0.001)DAES(0.999)PAKR;VIAIDSDAES(1)PAKR 159.22 4.7244e-08 11102280000.0 10124650.0 9939920.0 8673380.0 7746600.0 8604560.0 9395190.0 8001020.0 8086220.0 10313010.0 9304780.0 True False 9563015.481510606 9462391.323075905 9232479.952698676 8482834.534899786 9281689.918750651 9336551.134241214 8809841.184030255 8058170.790157943 8440427.353825673 9222346.888209287 1.036939468600651 1.026028562770016 1.001098751176053 0.919812997464348 1.006434699459986 1.0123834255440918 0.955271070457519 0.8737657439951932 0.9152146905921211 1.0 23.13670250144651 -6.971730266517656 5.133910674374115 0.9194064930790775 0.9977119056811183 0.36689621036691245 0.04164125460133982 0.1824234410767936 12.709853781913747 0.018777866584024895 0.01208736260246996 1.0672587730908545e-07 6.971730266517656 0.07830541260204082 VIAINVDDPDAANYNDINDVKR ddPTM_KYSE-520_SHP099_60min_R1 1 VIAINVDDPDAANYNDINDVKR 22 1 Q15181 Q15181 PPA1 Inorganic pyrophosphatase 0 172.0 2.5635e-09 158770000.0 169100.0 174580.0 132920.0 144980.0 218360.0 183060.0 150040.0 152590.0 189540.0 140690.0 False True 159719.6859075074 166192.91475007753 141488.2358795195 158758.85561017375 235543.68970155247 181917.4546373407 165207.50744928746 152060.70090477358 155124.31391457192 139443.59605516377 1.1454071067151943 1.1918289505696034 1.0146628449222355 1.138516648318284 1.6891682111265374 1.30459526133688 1.184762241673196 1.0904817804943763 1.1124520473009378 1.0 17.08932215457856 -7.166958950687321 2.956548666932738 1.0713359149551218 1.248860776448838 0.18361379419528923 0.1689530682135319 0.5556695859600398 9.321216391125079 0.10544649762553586 0.05328180907701843 6.808337077383483e-08 7.166958950687321 0.17752486149371616 VIDLTHDNKDDLQAAIALSLLES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 VIDLTHDNKDDLQAAIALSLLESPK 25 1 Q96RU2-2;Q96RU2;F5GZ74;Q96RU2-3 Q96RU2-2 USP28 Ubiquitin carboxyl-terminal hydrolase 28 1 VIDLTHDNKDDLQAAIALSLLES(1)PK;VIDLTHDNKDDLQAAIALS(0.001)LLES(0.999)PK 120.93 0.00013888 531380000.0 378453.0 394886.0 414341.0 348224.0 435540.0 361746.0 341334.0 409525.0 479940.0 361478.0 True False 357459.45766264875 375915.0838240302 441050.08382903994 381319.1042626365 469814.5201163871 359488.2090311348 375839.37181881594 408104.45335885324 392794.99430283677 358275.5861456281 0.9977220650400453 1.049234439522296 1.2310358307522704 1.0643178575601908 1.3113216146562154 1.0033846093130492 1.049023116149613 1.1390797172346854 1.0963487591453625 1.0 18.450710212245422 VIEPLKDFHKDEVR ddPTM_KYSE-520_SHP099_60min_R1 2 VIEPLKDFHKDEVR 14 2 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 0 ; 218.28 9.3251e-14 5929200000.0 10680900.0 7879000.0 6762900.0 5588500.0 9356600.0 7787500.0 6555200.0 6376200.0 7228700.0 5767100.0 False True 10088409.185153736 7500481.01337989 7198847.355022596 6119629.359756201 10092911.188228374 7738895.3238735525 7217863.588586841 6354082.450416274 5916150.300697821 5716007.980735901 1.7649396605382128 1.3121886880945623 1.2594187025777717 1.0706124589714685 1.765727273692325 1.3538986211977293 1.2627455407537036 1.1116293874730079 1.0350143527854476 1.0 22.446576500061624 -7.171388817209303 1.794489318279714 1.023874431047452 1.4080785717870954 0.4115413615677338 0.20107536953195615 0.4174176651175898 2.521786169692093 0.1462799212041869 0.0628980568400116 6.739244033163883e-08 7.171388817209303 0.3842041407396435 VIET(ph)PENDFK ddPTM_KYSE-520_SHP099_60min_R1 7 VIETPENDFK 10 0 Q9H0G5;A0A024QZ33 Q9H0G5 NSRP1;CCDC55 Nuclear speckle splicing regulatory protein 1 1 VIET(1)PENDFK;VIET(1)PENDFK;VIET(1)PENDFK;VIET(1)PENDFK;VIET(1)PENDFK;VIET(1)PENDFK;VIET(1)PENDFK 213.59 2.2562999999999998e-08 3701540000.0 11281700.0 11234400.0 9135680.0 7961610.0 8478680.0 10763200.0 8545820.0 10732000.0 12119900.0 10573600.0 True False 10655881.611488624 10694682.560821809 9724580.550404822 8718279.02065468 9145903.878909865 10696022.876393676 9409714.884765863 10694773.196867619 9919231.677815853 10479926.130136324 1.0167897635123895 1.0204921702709264 0.9279245320671287 0.831902716907917 0.8727069032108621 1.020620063879643 0.897879886548729 1.0205008188095406 0.946498243846574 1.0 23.321125211997053 -7.268255724910735 24.868273369028948 0.9876246433981625 0.9399459421496887 0.10698021154322768 0.06319402763800125 1356.9269162208718 4950473.218115529 0.03652921162990985 0.018158901446270987 5.3919303686699115e-08 7.268255724910735 -0.04767870124847373 VIFGLFGK ddPTM_KYSE-520_SHP099_60min_R1 2 VIFGLFGK 8 0 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 ; 146.21 0.0013043 73834000.0 295090.0 362250.0 304580.0 213750.0 396800.0 437930.0 254760.0 268170.0 254700.0 213168.0 False True 278720.7694526689 344846.9662516643 324213.71414523054 234064.73573371922 428025.9025168351 435196.7164281142 280513.6270179984 267239.78086134826 208452.90046450065 211279.4973621942 1.319204054025464 1.632183768690517 1.5345252056778345 1.107844058017918 2.0258752404312794 2.0598151825496873 1.327689768861561 1.2648637667062503 0.9866215277252012 1.0 17.68879324886053 -7.30384712209383 2.2266782339669047 1.0270547939011536 1.6038269022490164 0.4226978030238753 0.27799371413357565 0.34546843538207556 3.23020891194543 0.21131806601310446 0.08518995930821789 4.967671598633679e-08 7.30384712209383 0.5767721083478627 VIFPAAEDKDQDLITIIGK ddPTM_KYSE-520_SHP099_60min_R1 1 VIFPAAEDKDQDLITIIGK 19 1 Q00341;Q00341-2;A0A024R4E5;H0Y394;H7C2D1 Q00341 HDLBP Vigilin 0 130.11 1.2757999999999999e-05 115680000.0 335920.0 260770.0 212870.0 218380.0 336350.0 307950.0 213050.0 289060.0 245350.0 218920.0 False True 317285.8479600821 248242.21777624986 226591.9408040426 239134.76954165884 362818.8314302858 306027.96982174774 234587.17316762666 288057.318327111 200800.62477018128 216980.53911718258 1.4622779040507805 1.1440759562413296 1.0442961462164553 1.102102384456293 1.6721261404661816 1.410393628234439 1.0811438395446857 1.3275721384927646 0.9254314953182822 1.0 17.727206128267113 -7.763392864699601 24.996404396380548 0.9627156025609424 1.2728700957527668 0.31233365221024767 0.1883402729093366 69.10385733026537 884126.0677489121 0.1640899369576939 0.0506195237611755 1.7242773973594977e-08 7.763392864699601 0.3101544931918244 VIFWSALAGAIPLNGDS(ph)EEEANRDDR ddPTM_KYSE-520_SHP099_60min_R1 4 VIFWSALAGAIPLNGDSEEEANRDDR 26 1 Q9H089 Q9H089 LSG1 Large subunit GTPase 1 homolog 1 VIFWSALAGAIPLNGDS(1)EEEANRDDR;VIFWSALAGAIPLNGDS(1)EEEANRDDR;VIFWSALAGAIPLNGDS(1)EEEANRDDR;VIFWSALAGAIPLNGDS(1)EEEANRDDR 245.12 2.4880999999999997e-29 863468000.0 284378.0 292277.0 259213.0 227002.0 245073.0 235813.0 174281.5 231535.0 273379.0 193834.0 True False 268602.9854465119 278235.57420327875 275922.28473546443 248576.20182936 264358.85082537343 234341.2035966093 191899.57484352821 230731.85912567508 223740.26492377202 192116.78156057003 1.398123491683768 1.4482627282383316 1.436221669414509 1.2938807313456353 1.3760320606975562 1.2197851832257915 0.9988694026868583 1.2009979412076013 1.1646055232985038 1.0 17.551624019555664 -6.383521255705505 2.77467390522542 1.1068269075654293 1.3943465413878977 0.7923467818318852 0.07201837843703078 0.13184370952830793 1.966216031139249 0.02862499969081373 0.02458983281649482 4.1350307574209565e-07 6.383521255705505 0.28751963382246837 VIGQDHDFS(ph)ES(ph)S(ph)EEEAPAEASSGALR ddPTM_KYSE-520_SHP099_60min_R1 2 VIGQDHDFSESSEEEAPAEASSGALR 26 0 P23497;P23497-3;P23497-4;P23497-2;E9PHV6;P23497-7;P23497-6;P23497-5;H7C4B4;H7C1G8 P23497 SP100 Nuclear autoantigen Sp-100 3 VIGQDHDFS(1)ES(1)S(1)EEEAPAEASSGALR;VIGQDHDFS(1)ES(1)S(1)EEEAPAEASSGALR 121.82 0.00012077 1087050000.0 397750.0 392330.0 333420.0 354790.0 396150.0 315450.0 347980.0 394870.0 455350.0 351220.0 True False 375686.0146050325 373481.87790066405 354912.7866908622 388509.1349284969 427324.75121482945 313481.15953976393 383157.2143575251 393500.28813335067 372669.9184393812 348108.4640450255 1.079221143432008 1.0728893907398835 1.0195465590430361 1.1160577091806818 1.227562082947681 0.9005272549167814 1.1006834189126935 1.130395634627413 1.0705569008835671 1.0 18.409177367175026 -8.040427833897878 20.951766372079188 0.9999999962852334 1.080589630600516 0.08577883970248545 0.07871033406687225 2380.4396978473665 1233668.4190314254 0.07555886830103233 0.019509215898182195 9.111128380242913e-09 8.040427833897878 0.08058963431528265 VIHDNFGIVEGLMTTVHAITATQK ddPTM_KYSE-520_SHP099_60min_R1 7 VIHDNFGIVEGLMTTVHAITATQK 24 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;;;;; 311.37 1.0838999999999999e-60 1488131000.0 339440.0 352113.0 425406.0 494325.0 477892.0 386930.0 288927.0 339014.0 288115.0 113754.5 False True 320610.5865431356 335196.9629476117 452828.3514336664 541305.4993757701 515499.38156647026 384515.0263456039 318134.56081578456 337838.039560462 235800.57878810228 112746.72362966194 2.8436355063961063 2.9730084578655243 4.0163326867135165 4.801075205997036 4.572189461218634 3.410431930675136 2.821674551366637 2.9964333213810743 2.0914184572017733 1.0 16.78272598444148 -7.7518141393550115 0.8901976567677238 1.039653440716684 3.8126329483133508 0.6744569900330766 0.613631212078632 0.3673059784014984 0.6230719308862692 0.66749652014332 0.24493720540243916 1.7708666561802516e-08 7.7518141393550115 2.772979507596667 VIIPS(ph)PPKDDSPQLSEELR ddPTM_KYSE-520_SHP099_60min_R1 5 VIIPSPPKDDSPQLSEELR 19 1 Q96JM2;Q96JM2-3;H3BLX4;Q96JM2-2 Q96JM2 ZNF462 Zinc finger protein 462 1 VIIPS(0.999)PPKDDSPQLSEELR;VIIPS(0.999)PPKDDS(0.001)PQLSEELR;VIIPS(0.996)PPKDDS(0.002)PQLS(0.002)EELR;VIIPS(1)PPKDDSPQLSEELR;VIIPS(0.999)PPKDDS(0.001)PQLSEELR 95.319 0.00052649 2432705000.0 2312540.0 2550320.0 1814427.0 1903219.0 1881260.0 2390060.0 1872538.0 2594670.0 2731810.0 2608700.0 True False 2184258.7962658023 2427798.7990916357 1931387.8676058454 2084100.3615363447 2029304.4590948112 2375142.748992256 2061832.41524976 2585669.695370532 2235782.1673259814 2585588.9475378916 0.8447819203225427 0.9389732275130158 0.7469817928503274 0.8060447363533613 0.7848519235925733 0.9186080220732566 0.7974324059565326 1.0000312299573826 0.8647090518603079 1.0 21.302061505537676 -7.257396341728001 24.998307046061733 0.9492776070354962 0.8349416062745795 0.4176053845096014 0.06535127478870693 355.21776588242113 2196346.641622222 0.031715520932885446 0.017441985667655837 5.5284534642661955e-08 7.257396341728001 -0.11433600076091677 VIIPS(ph)PPKDDSPQLSEELRR ddPTM_KYSE-520_SHP099_60min_R1 4 VIIPSPPKDDSPQLSEELRR 20 2 Q96JM2;Q96JM2-3;H3BLX4;Q96JM2-2 Q96JM2 ZNF462 Zinc finger protein 462 1 VIIPS(1)PPKDDSPQLSEELRR;VIIPS(1)PPKDDSPQLSEELRR;VIIPS(1)PPKDDSPQLSEELRR;VIIPS(0.922)PPKDDS(0.035)PQLS(0.043)EELRR 163.15 5.2005e-09 4771420000.0 1579470.0 1557210.0 1304930.0 1051150.0 1078510.0 1397130.0 1106510.0 1350770.0 1755060.0 1418000.0 True False 1491853.650504614 1482399.294180136 1389047.8757618233 1151050.9799602279 1163382.6011175183 1388409.9934309407 1218366.8292969274 1346084.4941420888 1436385.345462215 1405437.6231873047 1.0614869175917832 1.054759933648492 0.9883383316661809 0.818998268560529 0.827772490165131 0.9878844642583652 0.8668949864412118 0.9577689339846953 1.0220199899051554 1.0 20.422587994073865 -4.974031814646826 4.678660473256833 0.9188848872490318 1.0537313988046026 0.3814236954249618 0.06688706890536264 0.19312869147394268 10.555886017328517 0.018651298527803794 0.03908759143849107 1.0616177845503804e-05 4.974031814646826 0.1348465115555708 VIISAPSADAPMFVMGVNHEK ddPTM_KYSE-520_SHP099_60min_R1 2 VIISAPSADAPMFVMGVNHEK 21 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 133.09 1.9739000000000002e-05 2001630000.0 1405030.0 1323440.0 1200100.0 1241090.0 1208750.0 1184960.0 1136090.0 1186170.0 1471660.0 992010.0 False True 1327090.1850421357 1259859.9558760622 1277460.3662278925 1359042.8204526866 1303871.7481532882 1177564.2251014055 1250937.0643699097 1182055.45312416 1204443.641529593 983221.5631721023 1.3497366562635515 1.2813591595890754 1.2992599166626362 1.3822345556255877 1.3261220023965845 1.1976590721854272 1.2722840011096732 1.2022269419219946 1.224997179317118 1.0 19.907157030444708 -8.900964894771498 0.29070035862982324 0.9167746020873112 1.3471505619446107 0.8374605653182695 0.041341818562462954 2.0923252368732554 0.2884337075614802 0.25981966689342095 0.0600033118472915 1.2561314961868938e-09 8.900964894771498 0.4303759598572995 VIKDEALS(ph)DGDDLRDFPSDLKK ddPTM_KYSE-520_SHP099_60min_R1 3 VIKDEALSDGDDLRDFPSDLKK 22 3 E7EUB5;Q01831-3;Q01831-2;Q01831 E7EUB5 XPC DNA repair protein complementing XP-C cells 1 VIKDEALS(1)DGDDLRDFPSDLKK;VIKDEALS(1)DGDDLRDFPSDLKK;VIKDEALS(1)DGDDLRDFPSDLKK 148.85 3.7635999999999996e-07 622125000.0 475980.0 547365.0 458999.0 438876.0 451262.0 465512.0 504093.0 439453.0 572151.0 481995.0 True False 449576.4405573936 521068.7637883843 488586.80996436643 480586.6430871191 486773.7520704438 462606.5669350917 555051.6399135813 437928.64011210145 468262.8011529815 477724.8992864362 0.9410781000297721 1.0907297579981483 1.022736748061812 1.0059903593154917 1.0189415556893175 0.9683534762916349 1.1618645809390422 0.916696284339005 0.980193416446185 1.0 18.8658205472705 VIKDFMIQGGDFTR ddPTM_KYSE-520_SHP099_60min_R1 2 VIKDFMIQGGDFTR 14 1 P23284 P23284 PPIB Peptidyl-prolyl cis-trans isomerase B 0 ; 190.82 9.968100000000001e-11 2895400000.0 1704960.0 1727610.0 1272120.0 1093140.0 1750390.0 1533350.0 1039180.0 1042380.0 1401940.0 1064300.0 False True 1610382.4700465014 1644613.0224045226 1354122.8906639668 1197031.6969354746 1888135.7346432533 1523779.7938826983 1144230.455819453 1038764.2270733198 1147383.0360314178 1054871.1300128703 1.5266153601405827 1.5590653451521201 1.2836856106275705 1.1347658143994044 1.7899207599133142 1.4445174870451776 1.0847111303591108 0.9847309282799749 1.0876997231097023 1.0 20.008635329917773 -6.787094792770031 4.946106932122204 1.0311539969237709 1.455267461383784 0.6114082799026629 0.163351011159495 0.14025352048975825 8.599752542649846 0.07250816735743912 0.05015510708133449 1.6326955431245698e-07 6.787094792770031 0.4241134644600131 VILHLK ddPTM_KYSE-520_SHP099_60min_R1 2 VILHLK 6 0 P08238;Q58FF7;Q58FF6;P07900;P07900-2;G3V2J8;Q14568 P08238;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;HSP90AA2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2 0 ; 104.03 0.018413 8184000000.0 16093200.0 14108700.0 10983900.0 9991600.0 16231200.0 15316400.0 11383500.0 12801800.0 11001200.0 10878200.0 False True 15200478.115001151 13430896.874409555 11691939.768861381 10941198.659915928 17508503.09710498 15220804.666269898 12534255.272253824 12757393.543762576 9003659.39768381 10781827.61111154 1.4098238873097764 1.245697608869941 1.0844116777393007 1.0147814502840078 1.623890098099979 1.4117091475830716 1.1625353070323872 1.1832310813998785 0.8350772913865563 1.0 23.362098412061176 -7.566556637862844 2.655720248955361 0.9195373829205016 1.2781232054446596 0.40037802870873695 0.17194371717978765 0.3138592148655164 4.199294294373817 0.15276381420240262 0.049796642963430705 2.71295982249688e-08 7.566556637862844 0.35858582252415805 VILHLKEDQTEYLEER ddPTM_KYSE-520_SHP099_60min_R1 1 VILHLKEDQTEYLEER 16 1 P08238;Q58FF7;Q58FF6;P07900;P07900-2;G3V2J8 P08238;P07900 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1 Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha 0 86.214 0.006934999999999999 80417000.0 233370.0 220220.0 185520.0 142570.0 200300.0 162720.0 158690.0 179800.0 207430.0 163010.0 False True 220424.5008884384 209640.30064304112 197478.9160424952 156119.80993476647 216062.47044889606 161704.40412208065 174731.93386515215 179176.31576563558 169765.94088477164 161565.85821986088 1.3643012410981157 1.2975532266090521 1.2222812308140212 0.9662920845709657 1.3373027744195527 1.0008575196749256 1.0814904571445703 1.1089986321355727 1.0507538087270392 1.0 17.301762837248756 -1.0000000000013503 0.3326211338902328 1.0418884215629247 4.681862580574791 0.5265070647430601 0.09785374846275308 46.062794824595684 0.6557490784210339 0.08535148921516343 103.34540601535078 0.09999999999968909 1.0000000000013503 3.639974159011866 VINAAHSFYNGTTTLPISDEDRT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 12 VINAAHSFYNGTTTLPISDEDRTPR 25 1 P49915-2;P49915 P49915-2 GMPS GMP synthase [glutamine-hydrolyzing] 1 VINAAHSFYNGTT(0.001)T(0.001)LPIS(0.021)DEDRT(0.977)PR;VINAAHSFYNGTTTLPIS(0.004)DEDRT(0.996)PR;VINAAHSFYNGTTTLPIS(0.008)DEDRT(0.992)PR;VINAAHSFYNGTTTLPISDEDRT(1)PR;VINAAHSFYNGTTTLPIS(0.001)DEDRT(0.999)PR;VINAAHSFYNGTTTLPIS(0.001)DEDRT(0.999)PR;VINAAHSFYNGTTTLPISDEDRT(1)PR;VINAAHSFYNGTTTLPISDEDRT(1)PR;VINAAHSFYNGT(0.026)T(0.026)T(0.184)LPIS(0.094)DEDRT(0.671)PR;VINAAHSFYNGTTTLPISDEDRT(0.999)PR;VINAAHSFYNGTTTLPIS(0.001)DEDRT(0.999)PR;VINAAHSFYNGTTTLPIS(0.001)DEDRT(0.998)PR 308.5 1.9176999999999996e-60 11279240000.0 3446581.0 3532441.0 3362563.0 3126041.0 2766056.0 3094135.0 2784171.0 2601780.0 3485917.0 3194549.0 True False 3255392.2813411155 3362737.2320579602 3579319.191271029 3423138.9967615046 2983728.8704942223 3074823.3557539 3065622.175570447 2592755.0324400174 2852962.345616451 3166247.781181512 1.028154619069749 1.0620575092209388 1.130460860500114 1.0811342741736187 0.9423548239742686 0.971125309279018 0.9682192890243366 0.8188730673101361 0.9010546687384788 1.0 21.594342730261697 -5.789830792225177 4.949315632486489 0.9266720415522012 1.079177583334637 0.6407843499642467 0.051931872797871224 0.12398725765094794 7.50545345236793 0.01732023295291978 0.02053921281144091 1.6224421024978758e-06 5.789830792225177 0.15250554178243592 VIPEDAS(ph)ESEEKLDQK ddPTM_KYSE-520_SHP099_60min_R1 6 VIPEDASESEEKLDQK 16 1 A0A2R8Y6X0;A0A669KBJ7;Q9H2P0 A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein 1 VIPEDAS(0.993)ES(0.007)EEKLDQK;VIPEDAS(0.995)ES(0.005)EEKLDQK;VIPEDAS(0.999)ES(0.001)EEKLDQK;VIPEDAS(1)ESEEKLDQK;VIPEDAS(0.979)ES(0.021)EEKLDQK;VIPEDAS(1)ESEEKLDQK 203.06 6.504e-13 3998480000.0 9775830.0 8590940.0 7958910.0 8542140.0 8458010.0 8419850.0 9092890.0 9676950.0 10082830.0 9299670.0 True False 9233545.222266033 8178218.347136172 8471954.073306253 9353982.417311952 9123607.267506095 8367298.592965217 10012088.059254559 9643382.919067113 8252042.239460064 9217282.158833768 1.0017644098501073 0.88727004405504 0.919137976609168 1.0148308640358992 0.9898370376740723 0.9077837098592091 1.086229963098076 1.0462284600699756 0.8952793347604504 1.0 23.135909984404154 -5.2563557861039385 24.773475922667703 0.9937769703811261 0.9311787302104186 0.1498368873600171 0.059956773832326636 659.9692580485125 3216165.871565328 0.01652366850725847 0.027525094683443267 5.5417153423010065e-06 5.2563557861039385 -0.06259824017070748 VIPEDAS(ph)ESEEKLDQKEDGSK ddPTM_KYSE-520_SHP099_60min_R1 4 VIPEDASESEEKLDQKEDGSK 21 2 A0A2R8Y6X0;A0A669KBJ7;Q9H2P0 A0A2R8Y6X0 ADNP Activity-dependent neuroprotector homeobox protein 1 VIPEDAS(0.997)ES(0.003)EEKLDQKEDGSK;VIPEDAS(0.996)ES(0.004)EEKLDQKEDGSK;VIPEDAS(0.955)ES(0.045)EEKLDQKEDGSK;VIPEDAS(0.985)ES(0.015)EEKLDQKEDGSK 188.39 2.9265e-13 3989780000.0 1959940.0 1763800.0 1544300.0 1586850.0 1858780.0 1777870.0 1769220.0 1792980.0 2073390.0 1858190.0 True False 1851218.2211564754 1679064.400482224 1643848.0489673638 1737663.746896151 2005055.410988513 1766773.6538626074 1948070.023523249 1786760.5708646765 1696914.641908485 1841727.8822499455 1.0051529539178914 0.9116788732280017 0.8925575079849245 0.9434964652722395 1.0886816832783346 0.9593022242266483 1.0577404199057847 0.9701544881222528 0.9213709898529909 1.0 20.812628486383478 -5.549702344754812 24.999590906672108 1.0005056840576492 0.9313250091325425 0.24764409504357543 0.052222363790773274 282.7731167708591 263542.86554393364 0.015369565199224132 0.019842438872336585 2.820315246885529e-06 5.549702344754812 -0.06918067492510671 VIPS(ph)PFK ddPTM_KYSE-520_SHP099_60min_R1 3 VIPSPFK 7 0 P34897-3;P34897-2;P34897;G3V2Y4;H0YIZ0;G3V4W5 P34897-3 SHMT2 Serine hydroxymethyltransferase, mitochondrial;Serine hydroxymethyltransferase 1 VIPS(1)PFK;VIPS(1)PFK;VIPS(1)PFK 87.30799999999999 0.008112399999999999 2164465000.0 6919380.0 7298090.0 5958610.0 5273570.0 5725840.0 7085080.0 5816340.0 6353770.0 8065430.0 6374770.0 True False 6535548.197957941 6947478.80174358 6342711.534713088 5774768.507243364 6176431.032426902 7040859.38764302 6404312.409208132 6331730.254851061 6600951.224944629 6318294.497296017 1.0343848645793419 1.0995813513784185 1.003864498153342 0.913975837896562 0.9775471901587008 1.1143607488787097 1.013614102974929 1.0021264848545433 1.0447362381999727 1.0 22.591103752354943 VIQAEGS(ph)NSSMLAEIEVLR ddPTM_KYSE-520_SHP099_60min_R1 3 VIQAEGSNSSMLAEIEVLR 19 0 Q86V48-2;Q86V48-3;Q86V48;E5RFK8 Q86V48-2 LUZP1 Leucine zipper protein 1 1 VIQAEGS(0.997)NS(0.001)S(0.001)MLAEIEVLR;VIQAEGS(0.924)NS(0.061)S(0.016)MLAEIEVLR;VIQAEGS(0.997)NS(0.001)S(0.002)MLAEIEVLR 261.92 4.2646e-35 110812000.0 101654.0 89989.0 83546.0 59199.0 56887.0 94520.0 68795.0 87553.0 96454.0 95714.0 True False 96015.04997777507 85665.79336375714 88931.50883832642 64825.25516117167 61363.68325724596 93930.06561958624 75749.46997449845 87249.2990780238 78940.38500747122 94866.0484243652 1.0121118310764883 0.9030184643145198 0.9374429557823285 0.6833346201075883 0.6468455709543968 0.9901336376888809 0.7984887241813596 0.9197104815384602 0.8321247308030207 1.0 16.533604233563093 -9.475999052352057 20.220509441842058 0.9999998995256723 0.8543708085645133 0.11928922010134402 0.115233858830841 0.0 0.0 0.11616058683455197 0.0281730805325053 3.341957692538642e-10 9.475999052352057 -0.14562909096115895 VIQLMPS(ph)PIMHPLILNPR ddPTM_KYSE-520_SHP099_60min_R1 4 VIQLMPSPIMHPLILNPR 18 0 P41212 P41212 ETV6 Transcription factor ETV6 1 VIQLMPS(1)PIMHPLILNPR;VIQLMPS(1)PIMHPLILNPR;VIQLMPS(1)PIMHPLILNPR;VIQLMPS(1)PIMHPLILNPR 177.5 4.9486e-09 1284890000.0 359166.0 533850.0 429714.0 309572.0 401154.0 515018.0 298146.0 369448.0 448931.0 320179.0 True False 339242.34600032977 508203.0446748128 457414.05200670956 338993.6298037844 432722.537545964 511803.5816257733 328285.50730455364 368166.47111781157 367416.4470295592 317342.46315549273 1.0690102503997596 1.6014341088220565 1.4413893667378008 1.0682265034215828 1.363582210975456 1.6127800122828118 1.034483390720072 1.1601550812234538 1.1577916279345541 1.0 18.275681053634425 -6.792365422822221 24.999984919693063 1.101453657448938 1.3610865469729347 0.3546950463603642 0.17889796634594532 248.58702894989858 200950.46312642182 0.0754235500813186 0.050856664537331696 1.6130007791704902e-07 6.792365422822221 0.25963288952399677 VIQPMGMS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 11 VIQPMGMSPR 10 0 H0YE35;Q9NPQ8-2;Q9NPQ8-4;Q9NPQ8;Q9NPQ8-3 H0YE35 RIC8A Synembryn-A 1 VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR;VIQPMGMS(1)PR 157.03 9.627299999999999e-05 19748480000.0 6909440.0 6624190.0 5843650.0 5809040.0 6049300.0 6163590.0 5508050.0 5553500.0 6841600.0 5781370.0 True False 6526159.589572844 6305953.969288093 6220341.029170589 6361129.415048433 6525345.494191258 6125120.74854237 6064857.447387689 5534236.204696639 5599337.902700937 5730151.559637796 1.1389157026040972 1.1004864188420687 1.0855456377429182 1.1101153867997378 1.138773630379111 1.0689282272543486 1.0584113499034657 0.9658097429182937 0.9771709952912436 1.0 22.450141867372004 -6.9627057623749575 1.8090233961287456 0.9771800935956982 1.110576914303842 0.8778554029287498 0.021101890662438335 0.11456482495099948 0.7434245939674103 0.012766838681058695 0.006669061993096477 1.0896681012530456e-07 6.9627057623749575 0.13339682070814374 VIQWCTHHKDDPPPPEDDENKEK ddPTM_KYSE-520_SHP099_60min_R1 2 VIQWCTHHKDDPPPPEDDENKEK 23 2 E5RJR5;P63208;E7ERH2;F8W8N3;P63208-2;E5RGM3 E5RJR5 SKP1 S-phase kinase-associated protein 1 0 ; 273.36 4.6361e-38 3316690000.0 4371700.0 3790400.0 2555540.0 2663860.0 3586270.0 4054500.0 3058870.0 3894700.0 3291110.0 2716680.0 False True 4129193.0862321043 3608303.494493608 2720274.1974085732 2917032.4534812896 3868489.0459149424 4029194.361559586 3368090.4312943383 3881190.194729814 2693527.3861316135 2692612.328745057 1.5335267695801547 1.3400753818041553 1.0102732459360046 1.0833466156046414 1.4367047957913515 1.496388588340702 1.2508634812884858 1.4414218316153653 1.0003398400047374 1.0 21.360575100813477 -7.776720974720633 24.776179687142264 1.000169445278265 1.313181798850367 0.388245317242197 0.16217423028677236 283.6319282836553 459839.850181451 0.1665806607955496 0.04369417954591221 1.672164600657684e-08 7.776720974720633 0.3130123535721019 VIQWCTHHKDDPPPPEDDENKEKR ddPTM_KYSE-520_SHP099_60min_R1 1 VIQWCTHHKDDPPPPEDDENKEKR 24 3 E5RJR5;P63208;E7ERH2;F8W8N3;P63208-2;E5RGM3 E5RJR5 SKP1 S-phase kinase-associated protein 1 0 89.721 0.0038954999999999997 420620000.0 365880.0 350270.0 392770.0 346060.0 269470.0 283250.0 244710.0 294570.0 427790.0 162660.0 False True 345583.9070363023 333442.5034340116 418088.5826542199 378949.43835326686 290675.75592543226 281482.1316837472 269447.6749394504 293548.20542315487 350114.1197083185 161218.958947565 2.1435686552764577 2.0682586316815303 2.5932966282842664 2.350526518884896 1.802987426683309 1.7459617251051518 1.6713150655382027 1.820804496812492 2.1716684067051317 1.0 17.298661885618493 -5.801963741048071 5.835293710665344 1.7395120420933545 2.2954779881094898 0.47283800183255764 0.30227195913787824 0.17504373700832687 14.819229055239084 0.09159989454520209 0.1064289174761046 1.5777429888934476e-06 5.801963741048071 0.5559659460161352 VIS(ph)DS(ph)ES(ph)DIGGS(ph)DVEFKPDTK ddPTM_KYSE-520_SHP099_60min_R1 2 VISDSESDIGGSDVEFKPDTK 21 1 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1 P52701-2 MSH6 DNA mismatch repair protein Msh6 4 VIS(1)DS(1)ES(1)DIGGS(1)DVEFKPDTK;VIS(1)DS(1)ES(1)DIGGS(1)DVEFKPDTK 73.34100000000001 0.0039361 144000000.0 339310.0 314380.0 244160.0 278880.0 317980.0 313180.0 290770.0 293360.0 327750.0 315310.0 True False 320487.7979022846 299276.7129059995 259898.94426981246 305384.67135167087 343003.2169412879 311225.3274517776 320163.8692417313 292342.4026307384 268238.86190514336 312516.5987074677 1.0255064826245543 0.9576346157092877 0.831632448787438 0.9771790446162102 1.0975519967896403 0.9958681514484968 1.0244699659662617 0.93544600139587 0.8583187677536107 1.0 18.25357329216991 -3.1372395919800624 2.9172427613436622 0.9661946202751684 21.069514241826706 0.05776965124932043 0.07322213193510323 2919.0590953413875 79.06921543100555 0.02034567362405784 389879.2544142711 0.0007290551934484329 3.1372395919800624 20.103319621551538 VIS(ph)DS(ph)ESDIGGS(ph)DVEFKPDTK ddPTM_KYSE-520_SHP099_60min_R1 4 VISDSESDIGGSDVEFKPDTK 21 1 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1 P52701-2 MSH6 DNA mismatch repair protein Msh6 3 VIS(0.995)DS(0.958)ES(0.047)DIGGS(1)DVEFKPDTK;VIS(0.992)DS(0.978)ES(0.031)DIGGS(1)DVEFKPDTK;VIS(0.996)DS(0.89)ES(0.138)DIGGS(0.977)DVEFKPDTK;VIS(0.867)DS(0.72)ES(0.413)DIGGS(1)DVEFKPDTK 193.57 1.8728e-12 1813850000.0 3630140.0 3111130.0 3009420.0 3213860.0 3348900.0 3511610.0 3092280.0 3347240.0 3815380.0 3063090.0 True False 3428768.8976953207 2961666.644898665 3203412.0284422506 3519304.2881177566 3612439.377365494 3489692.7394244117 3404877.8401445146 3335629.205691691 3122603.169902811 3035953.4056479596 1.1293878526977996 0.9755309944444159 1.0551584956747881 1.1592089264514374 1.1898863041326868 1.1494553022231284 1.1215184771315079 1.0987089589340295 1.0285412035947759 1.0 21.533718218458166 -3.0086848819133207 14.11928295358803 1.0964349169163674 83.53988632160754 0.0 0.0688737268263039 0.0 0.0 0.016704086713026943 0.0 0.0009802009477349247 3.0086848819133207 82.44345140469117 VIS(ph)DS(ph)ESDIGGSDVEFKPDTK ddPTM_KYSE-520_SHP099_60min_R1 1 VISDSESDIGGSDVEFKPDTK 21 1 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1 P52701-2 MSH6 DNA mismatch repair protein Msh6 2 VIS(0.996)DS(0.76)ES(0.04)DIGGS(0.205)DVEFKPDTK 126.68 3.232e-05 237680000.0 652580.0 599210.0 566880.0 515720.0 679490.0 712040.0 611070.0 553770.0 727670.0 479210.0 True False 616380.0865140221 570423.0521674531 603421.9918400698 564733.8737431284 732961.9972307563 707595.8942421736 672842.9190684897 551849.1011208893 595543.4710679353 474964.5722197387 1.2977390790083152 1.2009802110115095 1.2704568448547384 1.1890020998910602 1.5431929876480495 1.489786682268188 1.4166170666666147 1.1618742394655504 1.2538692481518638 1.0 18.85746038074554 -8.063801003281938 1.3071528796404026 1.0075691703662513 1.3360183438920525 0.41202934633689525 0.1187555586361198 0.5757093608547996 2.1712537118494737 0.1256052146149484 0.03828145326898745 8.633740610784241e-09 8.063801003281938 0.3284491735258013 VIS(ph)DSES(ph)DIGGS(ph)DVEFKPDTK ddPTM_KYSE-520_SHP099_60min_R1 1 VISDSESDIGGSDVEFKPDTK 21 1 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1 P52701-2 MSH6 DNA mismatch repair protein Msh6 3 VIS(0.994)DS(0.209)ES(0.797)DIGGS(1)DVEFKPDTK 150.14 5.293300000000001e-06 549220000.0 1421100.0 1183500.0 1273900.0 1215800.0 1168500.0 1287600.0 1138100.0 1314700.0 1446400.0 1138600.0 True False 1342268.750107383 1126642.883530284 1356017.6323120683 1331349.2664564007 1260454.302144461 1279563.6107890317 1253150.2547856169 1310139.6125532875 1183770.2207768096 1128512.8898173966 1.1894137516892465 0.998342946452818 1.201596937480691 1.1797377579549178 1.1169161766051372 1.1338493537243304 1.1104439001918602 1.1609434188786978 1.048964731779319 1.0 20.105991466338136 -7.934481804031526 4.234188056431577 1.000798413359646 1.1335657383619087 0.41328223304312683 0.05464944875356166 0.18074008371044684 6.166359554871622 0.050912387812401316 0.013374150620759246 1.1628352701825045e-08 7.934481804031526 0.13276732500226274 VIS(ph)DSES(ph)DIGGSDVEFKPDTK ddPTM_KYSE-520_SHP099_60min_R1 2 VISDSESDIGGSDVEFKPDTK 21 1 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1 P52701-2 MSH6 DNA mismatch repair protein Msh6 2 VIS(0.943)DS(0.18)ES(0.614)DIGGS(0.263)DVEFKPDTK;VIS(0.658)DS(0.449)ES(0.542)DIGGS(0.351)DVEFKPDTK 87.339 0.0016530000000000002 827050000.0 722990.0 714350.0 610690.0 546940.0 664300.0 697010.0 661940.0 622810.0 758590.0 508180.0 True False 682884.3034551672 680031.5537387896 650056.0545385481 598921.0131564933 716576.6306500344 692659.7020472682 728855.3551118466 620649.6174749468 620849.1784977049 503677.9205580576 1.355795589964625 1.3501317528180277 1.2906185242710433 1.1890952307238516 1.4226881929946273 1.375203624728726 1.4470663202871792 1.2322351092684163 1.2326313168737388 1.0 18.942141964218763 -8.103103761737788 1.4778841067342965 1.0029469629921324 1.3403975220049547 0.6690926151177512 0.07239609800538231 0.3343599343830444 1.5626674422815754 0.07286923443559058 0.021472506605431516 7.886716654907081e-09 8.103103761737788 0.3374505590128223 VIS(ph)DSESDIGGS(ph)DVEFKPDTK ddPTM_KYSE-520_SHP099_60min_R1 3 VISDSESDIGGSDVEFKPDTK 21 1 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1 P52701-2 MSH6 DNA mismatch repair protein Msh6 2 VIS(0.988)DS(0.012)ES(0.022)DIGGS(0.978)DVEFKPDTK;VIS(0.57)DS(0.289)ES(0.381)DIGGS(0.759)DVEFKPDTK;VIS(0.999)DS(0.184)ES(0.358)DIGGS(0.459)DVEFKPDTK 203.74 5.2463e-14 841400000.0 2314080.0 2283890.0 1810730.0 1834160.0 2231430.0 2229400.0 2171350.0 1912160.0 2385490.0 1769240.0 True False 2185713.369395886 2174168.496211221 1927452.5530704348 2008478.014939687 2407030.8459000555 2215485.4876460577 2390851.248333845 1905527.1632614967 1952345.1493092321 1753565.9100478918 1.246439245238402 1.2398555901168506 1.0991617378201621 1.145367849267116 1.3726492013261804 1.2634172887094677 1.363422517873051 1.086658421187861 1.1133571530572874 1.0 20.741860226497284 -7.391846393867783 7.752268641834826 1.0711334579568204 1.2425930476069806 0.4983606641935132 0.08299174001465343 0.26779775230846986 15.495840562558342 0.04941926810282177 0.023537011147064628 4.056519856119713e-08 7.391846393867783 0.17145958965016028 VIS(ph)HDRDSPPPPPPPPPPPQPQPSLK ddPTM_KYSE-520_SHP099_60min_R1 1 VISHDRDSPPPPPPPPPPPQPQPSLK 26 1 Q69YN4-3;Q69YN4;Q69YN4-4;Q69YN4-2 Q69YN4-3 KIAA1429 Protein virilizer homolog 1 VIS(0.587)HDRDS(0.413)PPPPPPPPPPPQPQPSLK 125.05 0.00011125 2847800000.0 951940.0 808410.0 706600.0 649960.0 616970.0 707030.0 815210.0 736030.0 759330.0 739060.0 True False 899133.9905546571 769572.7701518523 752148.5665999729 711732.002982401 665522.0289208969 702617.1635105372 897619.3824828955 733476.8837206931 621454.8131515863 732512.5033799794 1.227465724347159 1.050593357247649 1.0268064546739997 0.9716312004208906 0.9085469884132036 0.959187945964747 1.2253980353114458 1.0013165377195117 0.8483879937667308 1.0 19.48249385978786 -4.127521271671126 1.6486985997974073 0.9947332115656605 1.3712724071954916 0.37270590458849506 0.09196785089501491 1.698288145387849 3.4483971268072473 0.02697700869535124 1.1252921428195064 7.45553354054813e-05 4.127521271671126 0.37653919562983107 VIS(ph)KPIS(ph)EHK ddPTM_KYSE-520_SHP099_60min_R1 1 VISKPISEHK 10 1 A0A1W2PQ37;A0A1W2PQF8;A0A1W2PR68;A0A1W2PQT3;A0A1W2PPH1;A0A1W2PQH3;A0A1W2PQY8;P23368-2;P23368 A0A1W2PQ37 ME2 NAD-dependent malic enzyme, mitochondrial 2 VIS(1)KPIS(1)EHK 45.973 0.048026 300710000.0 457100.0 408230.0 253010.0 202620.0 435150.0 406510.0 301260.0 443360.0 351190.0 288780.0 True False 431743.7517937406 388618.01803427795 269319.42943031335 221876.94388007556 469393.8293351829 403972.82030277204 331714.3008142652 441822.087641002 287422.74877945776 286221.6338674406 1.5084245937667187 1.3577520775884493 0.9409471457180093 0.7751927793928904 1.6399662841439016 1.4113986243606804 1.158942097884515 1.5436362432534554 1.004196450477162 1.0 18.126773195745656 -7.887943312466976 16.2111495298207 1.0000211923341251 1.2764277510819322 0.16729707287117535 0.25686587014616696 1.8948095198575903 258.75801221897814 0.2602284756534952 0.06719193282701545 1.2943647811000187e-08 7.887943312466976 0.27640655874780706 VIS(ph)PPPFAPS(ph)PTLPPTFHPEEFLDEDLK ddPTM_KYSE-520_SHP099_60min_R1 1 VISPPPFAPSPTLPPTFHPEEFLDEDLK 28 0 Q5TC82-2;Q5TC82 Q5TC82-2 RC3H1 Roquin-1 2 VIS(1)PPPFAPS(0.894)PT(0.106)LPPTFHPEEFLDEDLK 114.76 0.00024701 24400000.0 74887.0 70394.0 56287.0 77802.0 76947.0 81287.0 80682.0 102340.0 108470.0 94568.0 True False 70732.86882646654 67012.16657645184 59915.35008238426 85196.27868797573 83002.29113145894 80779.65768111832 88838.12394043863 101985.00642633547 88774.5823061813 93730.20109279067 0.7546433060187578 0.7149474320460637 0.6392320659065853 0.908952266128539 0.8855447888059971 0.8618316907391288 0.9478068211172512 1.0880698562181974 0.9471289005162442 1.0 16.51622635749237 -5.856407855037648 0.7145954362215766 1.0109627620710118 0.6886356977862883 0.7410113096749986 0.06609030819232324 0.38785056106086935 0.43478693529981227 0.04332800834411724 0.06911840609464968 1.3918490743869199e-06 5.856407855037648 -0.32232706428472346 VIS(ph)PSQK ddPTM_KYSE-520_SHP099_60min_R1 1 VISPSQK 7 0 E7EWD6;Q76L83;A0A5F9ZHC8 E7EWD6 ASXL2 Putative Polycomb group protein ASXL2 1 VIS(0.858)PS(0.142)QK 120.99 0.0024892 615210000.0 1289200.0 1243800.0 998560.0 866410.0 966180.0 1108500.0 959650.0 1170600.0 1360400.0 1188600.0 True False 1217685.5060435138 1184045.9810181367 1062928.7753524913 948753.3459043348 1042212.8691877908 1101581.440322804 1056660.7872814506 1166539.4618200946 1113385.6528932338 1178069.9287168072 1.0336275261434245 1.0050727483620934 0.9022628873230544 0.8053455255731282 0.8846782723017161 0.9350730491208472 0.8969423304373795 0.9902124087750276 0.9450930082783544 1.0 20.16799374755763 -9.202579284083429 10.488298743946551 1.0000002035165825 0.929838543848185 0.08991724253437117 0.06302220250547749 0.0 0.0 0.06733890591679177 0.016332083635791916 6.27221181068497e-10 9.202579284083429 -0.07016165966839749 VISDSES(ph)DIGGS(ph)DVEFKPDTK ddPTM_KYSE-520_SHP099_60min_R1 1 VISDSESDIGGSDVEFKPDTK 21 1 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1 P52701-2 MSH6 DNA mismatch repair protein Msh6 2 VIS(0.089)DS(0.089)ES(0.825)DIGGS(0.997)DVEFKPDTK 80.293 0.0044728 372500000.0 502020.0 501240.0 331190.0 335030.0 514320.0 511810.0 452290.0 395310.0 455350.0 386470.0 True False 474171.9498479406 477159.6780234218 352539.0373227356 366871.15046955727 554794.0579195024 508615.60394372046 498011.8871250222 393938.7618760472 372669.9184393812 383046.17646911024 1.2378976190777327 1.245697535534338 0.9203564974134788 0.9577726472858883 1.4483738306267686 1.327817989549196 1.3001353824117419 1.028436742293955 0.9729112084465205 1.0 18.54715879490917 -7.4016183863819425 5.82943144705761 0.9912188891094176 1.2000794002256248 0.2797468613286819 0.1513477736503495 0.35577073853211183 15.352426392535062 0.09596120598794093 0.0447931010656016 3.966263959334226e-08 7.4016183863819425 0.20886051111620718 VISDSESDIGGS(ph)DVEFKPDTK ddPTM_KYSE-520_SHP099_60min_R1 1 VISDSESDIGGSDVEFKPDTK 21 1 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1 P52701-2 MSH6 DNA mismatch repair protein Msh6 1 VISDSES(0.006)DIGGS(0.994)DVEFKPDTK 110.94 5.345199999999999e-07 0.0 140600.0 121900.0 105010.0 118090.0 130580.0 127920.0 119240.0 104990.0 131020.0 113830.0 True False 132800.6377208489 116043.74102436962 111779.1126219406 129313.23809494685 140855.9031014324 127121.60383048544 131293.9428702549 104625.81419485016 107230.07074542147 112821.55475840003 1.1770856908082217 1.0285600235953998 0.990760257304628 1.146174934141465 1.2484839745655525 1.1267492643822188 1.1637310188767764 0.9273566068017719 0.9504395766841509 1.0 16.78368319795631 -7.2644197486099005 24.990560528559005 0.9541735590037682 1.1225139993542856 0.5370805629592641 0.07081149841267996 229.27170652364217 1922431.1761082672 0.04066524211293626 0.020862274966222616 5.43976641513492e-08 7.2644197486099005 0.16834044035051743 VISFIENTST(ph)PVDR ddPTM_KYSE-520_SHP099_60min_R1 4 VISFIENTSTPVDR 14 0 E9PGE5;Q9NUY8-2;Q9NUY8 E9PGE5 TBC1D23 TBC1 domain family member 23 1 VISFIENT(0.178)S(0.116)T(0.705)PVDR;VISFIENTS(0.009)T(0.991)PVDR;VISFIENTS(0.027)T(0.973)PVDR;VISFIENTS(0.026)T(0.974)PVDR 194.01 3.4847000000000004e-10 709080000.0 1070230.0 1213680.0 974340.0 847940.0 780640.0 1112440.0 870020.0 1244230.0 1195520.0 1176150.0 True False 1010862.2084493891 1155372.99102918 1037147.5153991206 928527.9626575431 842071.9267659823 1105496.8493213344 957970.1121769462 1239914.0565354647 978443.7046066726 1165730.2260308543 0.8671493505759315 0.9911152385256927 0.8896977124205319 0.7965204486625082 0.7223557457484118 0.9483299177077994 0.8217768492103857 1.0636372196997892 0.8393397398111005 1.0 20.152802527160524 -10.022286217353203 6.521933681949409 1.0000000487637488 0.8839176411670786 0.12422464503920738 0.09372468222026643 6.803768369620817e-08 1.0179683131236605e-08 0.09282161194151642 0.02251253827616145 9.499785136472819e-11 10.022286217353203 -0.11608240759667021 VISGTTLGYLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 VISGTTLGYLSPK 13 0 H0YBY0;E7EPX0;E7EVJ4;Q9NUL3-4;Q9NUL3-6;Q9NUL3-8;Q9NUL3-3;Q9NUL3-7;Q9NUL3-2;Q9NUL3;E5RJ67;E5RJN7 H0YBY0 STAU2 Double-stranded RNA-binding protein Staufen homolog 2 1 VISGTTLGYLS(1)PK;VISGTTLGYLS(1)PK;VISGTTLGYLS(1)PK;VISGTTLGYLS(1)PK 211.7 3.5825e-11 4240129000.0 2845110.0 3085350.0 2293740.0 2337840.0 2453950.0 3749730.0 3273790.0 4472870.0 4851140.0 4303410.0 True False 2687286.0767138246 2937125.1547952355 2441598.1505137584 2560027.6107027736 2647061.9039344415 3726326.544178283 3604736.642311401 4457354.657945701 3970295.2632876216 4265285.13540232 0.6300366778317034 0.6886116781306798 0.5724349188869542 0.6002008141153969 0.6206060837442136 0.8736406654854975 0.8451338018158983 1.0450308751809307 0.9308393547558518 1.0 22.024210758624065 -6.494074466396282 1.5805081910780245 0.9777059489511329 0.616478719846583 0.8949579959974634 0.054816233295283144 0.11354935645025807 0.572097534760923 0.026488243368571387 0.020066848269370285 3.2057196079795504e-07 6.494074466396282 -0.36122722910454996 VISHDRDS(ph)PPPPPPPPPPPQPQPSLK ddPTM_KYSE-520_SHP099_60min_R1 4 VISHDRDSPPPPPPPPPPPQPQPSLK 26 1 Q69YN4-3;Q69YN4;Q69YN4-4;Q69YN4-2 Q69YN4-3 KIAA1429 Protein virilizer homolog 1 VIS(0.225)HDRDS(0.775)PPPPPPPPPPPQPQPSLK;VISHDRDS(1)PPPPPPPPPPPQPQPSLK;VIS(0.001)HDRDS(0.999)PPPPPPPPPPPQPQPSLK;VISHDRDS(1)PPPPPPPPPPPQPQPSLK 217.62 9.3339e-22 13009070000.0 7585780.0 7768820.0 6538460.0 5326420.0 5850440.0 6490120.0 5772040.0 6253150.0 7300710.0 6897490.0 True False 7164981.661522479 7395594.225963444 6959939.593505898 5832641.355353426 6310836.343549886 6449612.753692218 6355534.1328818 6231459.282146183 5975085.099922197 6836383.604766011 1.048066064714008 1.0817991870449717 1.0180732966262673 0.8531764296092422 0.9231249602714309 0.9434246418231776 0.9296631816346606 0.9115139878636852 0.8740125547894421 1.0 22.704801921453257 -5.067929459388362 5.222252840029151 0.9175410131316496 1.0622449859416605 0.7191635800546605 0.03793594270811862 0.10010865057047544 5.2301832286657435 0.010009474138855026 0.01815384603558113 8.552056090259152e-06 5.067929459388362 0.1447039728100109 VISRPPPSVS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 2 VISRPPPSVSPPK 13 1 A0A0C4DGG3;Q8NHM5-2;Q8NHM5;Q8NHM5-4;Q8NHM5-3 A0A0C4DGG3 KDM2B Lysine-specific demethylase 2B 1 VISRPPPS(0.194)VS(0.806)PPK;VISRPPPS(0.026)VS(0.974)PPK 82.007 0.004819100000000001 1044250000.0 1038860.0 985470.0 729520.0 709030.0 764280.0 1014990.0 708530.0 964230.0 1094570.0 1034620.0 True False 981232.3648839336 938126.541979373 776546.0264732704 776415.9980223577 824424.4878416505 1008655.0709185759 780155.1269864277 960885.3111829731 895823.6798642644 1025454.0717221802 0.9568759751824094 0.9148401355546362 0.7572704111156477 0.7571436102627395 0.8039604216082401 0.9836179881021959 0.7607899256533355 0.9370339810238714 0.8735873254272516 1.0 19.96783144682456 -7.325717333191765 24.99493659278262 0.928983182027389 0.8469353873140715 0.1929128975365848 0.083022467380925 414.70910522478687 161259.97417239108 0.04700684295123054 0.022581358357454652 4.723703902921739e-08 7.325717333191765 -0.08204779471331758 VIVDGS(ph)DMEEWPCIASK ddPTM_KYSE-520_SHP099_60min_R1 2 VIVDGSDMEEWPCIASK 17 0 Q9UPQ9-1;Q9UPQ9 Q9UPQ9-1 TNRC6B Trinucleotide repeat-containing gene 6B protein 1 VIVDGS(1)DMEEWPCIASK;VIVDGS(1)DMEEWPCIASK 237.89 3.2016e-23 87918000.0 146712.0 145374.0 117471.0 123335.0 131458.0 122542.0 115994.0 116934.0 131678.0 128472.0 True False 138573.5928968788 138390.01482917735 125043.3686202455 135056.72131798 141802.99670629553 121777.169923353 127719.80551234772 116528.3832466007 107768.59453225165 127333.83802970358 1.0882699763165333 1.086828269457288 0.9820120916411569 1.0606506754824658 1.1136316858148632 0.9563614182032716 1.003031146226458 0.915140743809338 0.8463468642727326 1.0 16.958256330208414 -6.742043840675889 1.4593223610656 0.9155615279731497 1.0607738430177365 0.5476534416158352 0.054096985489474066 0.30864886381764917 1.3362524217396008 0.03173585450703914 0.019126534300266815 1.8111572527050897e-07 6.742043840675889 0.14521231504458676 VIY(ph)DFIEK ddPTM_KYSE-520_SHP099_60min_R1 10 VIYDFIEK 8 0 O00401 O00401 WASL Neural Wiskott-Aldrich syndrome protein 1 VIY(1)DFIEK;VIY(1)DFIEK;VIY(1)DFIEK;VIY(1)DFIEK;VIY(1)DFIEK;VIY(1)DFIEK;VIY(1)DFIEK;VIY(1)DFIEK;VIY(1)DFIEK;VIY(1)DFIEK 178.99 8.4516e-05 1925719000.0 1913494.0 1584043.0 1379697.0 1252288.0 1442849.0 1497870.0 1279653.0 1344233.0 1707039.0 1459445.0 True False 1807348.6733642782 1507943.196582984 1468634.476213252 1371305.075005885 1556393.007612179 1488521.2377233356 1409012.8134497667 1339570.1694693416 1397083.7485513177 1446515.4527310303 1.2494499591774098 1.0424660128835663 1.0152912458974848 0.9480058249062271 1.07596016667067 1.0290392922612739 0.9740738066707422 0.9260669610823892 0.9658270472766916 1.0 20.464150304592618 -4.109720483207014 1.7668651681099272 0.9901139178251747 1.417368305715967 0.7861767201956595 0.04025078730027996 0.6823814578469063 1.561482768103449 0.012007562358195686 0.5513702172977827 7.767468787765263e-05 4.109720483207014 0.4272543878907923 VKAEAEAAR ddPTM_KYSE-520_SHP099_60min_R1 4 VKAEAEAAR 9 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 ;;; 112.15 0.00099752 2259820000.0 4290100.0 4125420.0 3119060.0 2659580.0 4065680.0 4190870.0 3023940.0 3690350.0 3793730.0 3608940.0 False True 4052119.6008976796 3927228.63081834 3320119.598272454 2912345.683568116 4385625.8854451785 4164713.225805711 3329629.3660103916 3677549.0371841625 3104884.2641507266 3576967.599312831 1.1328365405591398 1.0979212200783695 0.928193925746009 0.8141940352290595 1.226073696135156 1.1643139363649229 0.930852537397891 1.0281191917675334 0.8680213555043674 1.0 21.770305619577243 -6.811291587091686 24.999704034672934 0.9590914251896732 1.0525909945900764 0.15496163850338818 0.1178600103074616 264.82272330990577 132799.78150946513 0.05335137906706598 0.035969566850007365 1.5442172975962815e-07 6.811291587091686 0.09349956940040327 VKAPVHFVEPLS(ph)PTGVAGHR ddPTM_KYSE-520_SHP099_60min_R1 2 VKAPVHFVEPLSPTGVAGHR 20 1 Q5T5Y3-2;Q5T5Y3;Q5T5Y3-3 Q5T5Y3-2 CAMSAP1 Calmodulin-regulated spectrin-associated protein 1 1 VKAPVHFVEPLS(0.999)PT(0.001)GVAGHR;VKAPVHFVEPLS(1)PTGVAGHR 176.44 1.7832999999999998e-09 2823200000.0 1455490.0 1401560.0 1639630.0 1580670.0 1413050.0 1510000.0 1722990.0 1622890.0 2215960.0 1606960.0 True False 1374751.0682526168 1334226.9538155505 1745323.173300756 1730896.4015542336 1524248.9958452962 1500575.529893939 1897166.6439619302 1617260.5733753752 1813597.523805713 1592723.5845959634 0.8631447926988278 0.8377015112474854 1.0958104659092516 1.086752540299277 0.9570078641310271 0.9421443522320917 1.191146199070818 1.015405679313549 1.1386768811273553 1.0 20.603064479793918 -4.756156127851546 24.966656724407873 1.0526174544528797 0.8504230596671444 0.5430357839256986 0.07446461803390506 93.94226035488921 443921.7395479822 0.01936237385576748 0.04813384010300921 1.75325009922009e-05 4.756156127851546 -0.2021943947857353 VKAQT(ph)PPGPSLSGS(ph)KSPCPQEK ddPTM_KYSE-520_SHP099_60min_R1 1 VKAQTPPGPSLSGSKSPCPQEK 22 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 VKAQT(1)PPGPS(0.011)LS(0.153)GS(0.523)KS(0.313)PCPQEK 86.869 0.012534 1403400000.0 1798800.0 1764700.0 1885800.0 1373000.0 1650200.0 1692000.0 1513200.0 1370300.0 2050300.0 1546200.0 True False 1699016.978181099 1679921.1631312994 2007361.6853866822 1503489.5071924988 1780061.3516463737 1681439.6003844677 1666169.0234088353 1365546.7491304253 1678017.2038569534 1532501.8709253988 1.108655728527855 1.0961951792704057 1.309859207006736 0.9810686275277557 1.1615394313166394 1.0971860017170048 1.0872215264590326 0.8910571497742068 1.0949527930061747 1.0 20.547457404527766 -7.0469454590818525 7.907491783946919 0.9931925457189569 1.125011771411381 0.30114691484950207 0.08884498057105518 0.36799791085964767 56.21390981998589 0.03998488822646701 0.023279375790160355 8.975415052674603e-08 7.0469454590818525 0.1318192256924241 VKAQT(ph)PPGPSLSGSK ddPTM_KYSE-520_SHP099_60min_R1 2 VKAQTPPGPSLSGSK 15 1 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VKAQT(1)PPGPSLSGSK;VKAQT(1)PPGPSLSGSK 113.47 0.00048825 5314400000.0 1373740.0 1559940.0 1067210.0 972890.0 858070.0 1519690.0 998580.0 1324390.0 1676360.0 1413280.0 True False 1297535.9037172021 1484998.140882324 1136004.0641963743 1065353.173089956 925595.2272495489 1510205.0510096175 1099526.211601636 1319796.00020495 1371975.2815966622 1400759.4387152018 0.926308877780843 1.0601378793809073 0.8109915470127652 0.7605539849634098 0.6607810032667131 1.0781330535918436 0.7849500643808892 0.9422003262854951 0.9794510346866263 1.0 20.417777783214238 -7.491360827177447 8.420698879117285 0.9804734960274611 0.8693324441078091 0.14083652759640897 0.12226430108916621 0.6193623459923056 156.71060608664632 0.07266835294694285 0.03351719090076452 3.225812888880901e-08 7.491360827177447 -0.11114105191965207 VKAQT(ph)PPGPSLSGSKS(ph)PCPQEK ddPTM_KYSE-520_SHP099_60min_R1 1 VKAQTPPGPSLSGSKSPCPQEK 22 2 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 VKAQT(1)PPGPSLS(0.01)GS(0.261)KS(0.728)PCPQEK 151.34 1.234e-06 2236200000.0 2477800.0 2709500.0 2393300.0 2107900.0 2267100.0 2218800.0 1847000.0 1953200.0 2773700.0 2027100.0 True False 2340351.494628159 2579331.5529575828 2547575.9474153905 2308234.182236755 2445507.871965514 2204951.6461779303 2033712.784982897 1946424.805080306 2270065.999286946 2009141.4710599366 1.1648515190886435 1.2837978759140531 1.2679923161764208 1.1488659287984484 1.2171904802081306 1.0974596253865054 1.012229757972194 0.9687843455112477 1.1298686687749055 1.0 20.938147722449997 -6.395997255684008 2.222286502787662 1.0244852107754747 1.2232362648033077 0.7272615379776255 0.05469354628928257 0.162829964195277 1.581507947519396 0.022531447731247437 0.018982937457241545 4.01793349781571e-07 6.395997255684008 0.198751054027833 VKAS(ph)PITNDGEDEFVPS(ph)DGLDKDEYT(ph)FSPGK ddPTM_KYSE-520_SHP099_60min_R1 1 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK 31 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 3 VKAS(0.99)PIT(0.01)NDGEDEFVPS(1)DGLDKDEY(0.098)T(0.643)FS(0.259)PGK 143.28 4.0342e-06 2410500000.0 748390.0 787330.0 580290.0 704960.0 666560.0 706230.0 600340.0 698220.0 847720.0 797580.0 True False 706875.3148215214 749505.484993577 617696.4218968287 771959.1864460479 719014.4797923934 701822.1566072836 661028.2259537802 695798.0377857729 693795.4172821605 790514.06170785 0.8941970156664476 0.9481241653998199 0.7813857486131733 0.9765280895551489 0.9095530549311334 0.8878047723667891 0.8362004649552663 0.880184264252745 0.8776509500454228 1.0 19.592431599987883 -10.022867905690335 5.70454556095734 1.0000002984140264 0.8880784158372416 0.3015076664584594 0.051159755462034454 1.8939517569379363e-07 3.250044626706321e-08 0.04831832560134705 0.01171888412998186 9.487069766067794e-11 10.022867905690335 -0.11192188257678481 VKAS(ph)PITNDGEDEFVPS(ph)DGLDKDEYTFS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 1 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK 31 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 3 VKAS(1)PITNDGEDEFVPS(1)DGLDKDEYT(0.032)FS(0.968)PGK 149.87 3.0121e-06 2444900000.0 950620.0 1011900.0 699300.0 757620.0 798050.0 710320.0 802490.0 790630.0 950800.0 949010.0 True False 897887.2135860116 963286.8051071353 744377.9969195612 829623.9770132405 860851.9947166343 705886.629400175 883613.5207476595 787887.489064429 778158.6877174992 940602.5097186072 0.9545873036790276 1.024116771063384 0.791384234284311 0.8820133568019425 0.9152133720907982 0.7504622006710886 0.9394122507838123 0.8376412787800611 0.827298119744859 1.0 19.843225656041337 -4.751127483729203 24.999923637568855 0.86267917234145 0.9893520699153772 0.3191706398412688 0.07060464670873812 216.65986466391135 525255.0257272501 0.01676401804461554 0.04331068482044057 1.773668757953806e-05 4.751127483729203 0.1266728975739272 VKAS(ph)PITNDGEDEFVPS(ph)DGLDKDEYTFSPGK ddPTM_KYSE-520_SHP099_60min_R1 4 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK 31 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 VKAS(0.994)PIT(0.006)NDGEDEFVPS(1)DGLDKDEYTFSPGK;VKAS(0.999)PIT(0.001)NDGEDEFVPS(1)DGLDKDEYTFSPGK;VKAS(1)PITNDGEDEFVPS(1)DGLDKDEYTFSPGK;VKAS(0.886)PIT(0.114)NDGEDEFVPS(0.999)DGLDKDEYTFSPGK 330.31 2.0393999999999997e-67 5027780000.0 793854.0 717042.0 632228.0 757801.0 646834.0 616435.0 672149.0 733610.0 779750.0 678104.0 True False 749817.3361112857 682594.226018015 672982.4284805668 829822.1791988215 697736.1558179803 612587.6005100462 740096.3804620852 731065.2781358608 638167.0558978966 672096.5261169283 1.1156393568099412 1.015619333671813 1.0013181177542412 1.2346770842473493 1.0381487311788178 0.9114577693911053 1.1011757265552755 1.087738516310488 0.9495169683214093 1.0 19.35830892135405 -5.986261721828696 24.999603040460862 1.0160103991284744 1.0869702938572334 0.18866755330501972 0.07941881595993168 476.71053902854914 867467.5459019039 0.02536855292561663 0.028751909483864125 1.0321392132488893e-06 5.986261721828696 0.07095989472875908 VKAS(ph)PITNDGEDEFVPSDGLDKDEYT(ph)FSPGK ddPTM_KYSE-520_SHP099_60min_R1 1 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK 31 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 VKAS(1)PITNDGEDEFVPSDGLDKDEYT(0.688)FS(0.312)PGK 248.93 9.257999999999999e-31 1654900000.0 944850.0 986370.0 843740.0 884700.0 932030.0 908660.0 831800.0 927420.0 1127500.0 998850.0 True False 892437.2869882209 938983.3046284466 898128.8304317325 968781.6220052461 1005375.4584747116 902988.715889687 915886.4615856941 924202.9964814543 922774.4219620109 990000.9660935405 0.9014509253558635 0.948467058909644 0.9071999535269872 0.9785663400188142 1.015529775129248 0.9121089239466134 0.9251369371887626 0.9335374692898337 0.9320944661328969 1.0 19.9170704074853 -3.6851633196004765 1.1158024352908125 0.9500961162075898 0.7981294204315278 0.1565797323353787 0.034651221272623774 11.551986474471105 4.847691148004292 0.011048916568924809 2.81417625544649 0.00020646036005960057 3.6851633196004765 -0.15196669577606203 VKAS(ph)PITNDGEDEFVPSDGLDKDEYTFSPGK ddPTM_KYSE-520_SHP099_60min_R1 1 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK 31 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 VKAS(0.996)PIT(0.004)NDGEDEFVPSDGLDKDEYTFSPGK 161.62 3.6188e-10 3575300000.0 1770100.0 2171200.0 1491700.0 1791300.0 1460300.0 1751700.0 1607700.0 1770400.0 2499200.0 1779500.0 True False 1671909.0243931315 2066892.292962357 1587857.3688043861 1961544.6134260152 1575217.3020295734 1740766.9905398774 1770222.0056399591 1764258.8956144662 2045408.2797050653 1763735.0144300503 0.9479366292069717 1.1718836877716983 0.9002811396345165 1.1121538084675873 0.8931144923369363 0.9869776220904732 1.0036779851603757 1.0002970294177582 1.1597027121254027 1.0 20.750202394344136 -9.870666284006788 4.365967253903408 0.9999997941887304 1.0175429729298053 0.003465667095956637 0.09406560821225085 58170816.21037026 4.1461703435328925 120.3986081417306 0.021298761068851983 1.3468949233345147e-10 9.870666284006788 0.017543178741074916 VKASPIT(ph)NDGEDEFVPSDGLDKDEYTFSPGK ddPTM_KYSE-520_SHP099_60min_R1 1 VKASPITNDGEDEFVPSDGLDKDEYTFSPGK 31 2 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 1 VKAS(0.322)PIT(0.678)NDGEDEFVPSDGLDKDEYTFSPGK 208.28 2.7494999999999996e-22 2474400000.0 1155000.0 1332300.0 1112700.0 1079100.0 1049000.0 1095400.0 1100800.0 1139500.0 1472100.0 1006400.0 True False 1090929.8475645825 1268294.30817693 1184426.4223829482 1181657.3395567548 1131550.3320064517 1088563.202282002 1212079.6067726994 1135547.3404613005 1204803.7486210892 997484.0789673531 1.093681463762278 1.271493284875217 1.18741386189254 1.1846377947005102 1.1344044039057655 1.0913088491687393 1.215136794992765 1.1384114938825667 1.2078425851852834 1.0 19.92793428882628 -10.36908121329264 3.163389265006877 0.9982817920233575 1.1704646497517266 0.47453379588193334 0.05345717399983857 11555347.077854797 13583908.407007368 178638.97162134448 0.012976909137363065 4.274829391461306e-11 10.36908121329264 0.17218285772836905 VKDEPDS(ph)PPVALGMVDR ddPTM_KYSE-520_SHP099_60min_R1 3 VKDEPDSPPVALGMVDR 17 1 A0A087X1T2;G3V0I8;Q12772-2;Q12772 A0A087X1T2 SREBF2 Sterol regulatory element-binding protein 2;Processed sterol regulatory element-binding protein 2 1 VKDEPDS(1)PPVALGMVDR;VKDEPDS(1)PPVALGMVDR;VKDEPDS(1)PPVALGMVDR 148.09 4.4692e-06 1674130000.0 2275180.0 1686100.0 1600600.0 1586730.0 1801480.0 2008920.0 1751720.0 1897250.0 2082610.0 1689820.0 True False 2148971.2299411134 1605097.2251123039 1703777.2370505505 1737532.3421322296 1943246.2269809174 1996381.5851089647 1928800.9527397077 1890668.8825714802 1704460.52232577 1674849.509460067 1.2830831772067046 0.9583531033959883 1.0172718369185356 1.0374259492080398 1.1602512440699078 1.1919766963137794 1.1516264248490653 1.1288589642785212 1.017679805080069 1.0 20.67560003999341 -4.234519738697611 23.8426616483027 1.0836794799166838 1.2830836914682495 0.3998870892955594 0.07606824513561734 5901.109268801206 5226449.347611623 0.020710544917625712 1.607939102604043 5.827472883122213e-05 4.234519738697611 0.19940421155156574 VKDEPQR ddPTM_KYSE-520_SHP099_60min_R1 6 VKDEPQR 7 1 P05204;O00479 P05204 HMGN2;HMGN4 Non-histone chromosomal protein HMG-17;High mobility group nucleosome-binding domain-containing protein 4 0 ;;;;; 117.04 0.0029343000000000004 4617390000.0 4623400.0 4133130.0 2850240.0 3021590.0 4482570.0 4223970.0 3771760.0 4546350.0 3651840.0 4198630.0 False True 4366930.785480604 3934568.23084539 3033971.0309452466 3308761.005125839 4835322.756665549 4197606.636427885 4153046.309630262 4530579.772976069 2988757.911394902 4161433.4046847112 1.049381393575722 0.9454838869741543 0.7290687452861242 0.7951012748157927 1.1619368343663052 1.0086924932410193 0.9979845658361354 1.0887065422879993 0.7182039505979656 1.0 21.988649119237216 -5.7347701908024575 24.999606576233386 1.0010980023937888 0.8736899296929982 0.15359898080697432 0.1329494050786951 412.66663237391106 386830.39396418975 0.04002891128879173 0.051661799414403596 1.841746313363746e-06 5.7347701908024575 -0.12740807270079058 VKDEPQRR ddPTM_KYSE-520_SHP099_60min_R1 1 VKDEPQRR 8 2 P05204;O00479 P05204 HMGN2;HMGN4 Non-histone chromosomal protein HMG-17;High mobility group nucleosome-binding domain-containing protein 4 0 88.948 0.0030482 7997100000.0 1187400.0 1060300.0 620030.0 567190.0 1027700.0 966660.0 737950.0 847510.0 790300.0 891620.0 False True 1121532.5549767837 1009361.5964572536 659998.1258830765 621095.5670681087 1108574.143186873 960626.7163756802 812549.1876979582 844570.1856203213 646801.4418417537 883720.9404698624 1.2691026132983565 1.1421723196019207 0.7468399759002705 0.7028186598564482 1.254439147495429 1.0870249559379321 0.919463543848963 0.9556978305518876 0.7319068862370265 1.0 19.7532313447783 -4.566973237986485 7.491220777126757 0.932749469640569 1.238558161366455 0.33692394171560536 0.1616413069727557 0.22174228560262194 31.202002932891094 0.043953261511067876 0.11898758446228523 2.7103586439595443e-05 4.566973237986485 0.3058086917258859 VKDRS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 2 VKDRSPLR 8 2 Q13325-2;Q13325 Q13325-2 IFIT5 Interferon-induced protein with tetratricopeptide repeats 5 1 VKDRS(1)PLR;VKDRS(1)PLR 64.439 0.025259999999999998 952180000.0 1183790.0 1033750.0 1005620.0 931500.0 1106450.0 972270.0 922730.0 947910.0 1300280.0 995830.0 True False 1118122.8088731407 984087.0983096146 1070443.8742488888 1020029.4799343132 1193521.3201606649 966201.7022847557 1016008.5533769724 944621.9214538564 1064181.9293913646 987007.7209440175 1.1328409952089524 0.9970409323327182 1.0845344484489639 1.0334564343212151 1.2092319997447727 0.9789201054685144 1.0293825791000066 0.9570562635015444 1.078190075730648 1.0 19.912701844755848 VKEDPDGEHAR ddPTM_KYSE-520_SHP099_60min_R1 1 VKEDPDGEHAR 11 1 A0A087X0X3;P52272-2;P52272;M0R2T0;M0QYQ7;M0R0N3;M0R019 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 0 69.721 0.02653 684490000.0 2781900.0 2571200.0 1954000.0 1880600.0 2741800.0 2596700.0 2183400.0 2513700.0 2445600.0 2252200.0 False True 2627582.4614198375 2447675.6925501158 2079957.9665105427 2059331.6585769951 2957564.0612919824 2580493.0321030426 2404119.379930517 2504980.5614019893 2001540.6885590218 2232247.2601850866 1.1771018866440324 1.0965074237999812 0.9317775873708914 0.9225374336023356 1.324926729240002 1.1560068089809554 1.0769951083874014 1.1221788043293595 0.8966482899358847 1.0 21.090065408895207 -7.755028976872867 24.995446464144884 0.9483241283734769 1.0977615584863822 0.2281241047301874 0.1122120383914499 222.88589494309034 869102.8443162969 0.08555503163667133 0.030605859398286323 1.7578063261923052e-08 7.755028976872867 0.14943743011290533 VKEEAS(ph)SPLK ddPTM_KYSE-520_SHP099_60min_R1 1 VKEEASSPLK 10 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VKEEAS(0.5)S(0.5)PLK 145.0 0.00031515 392680000.0 867600.0 778250.0 641900.0 671200.0 683650.0 743050.0 729350.0 762290.0 831100.0 677140.0 True False 819472.4984822785 740861.7018229339 683277.901076314 734990.6461963613 737449.3655635947 738412.3493295967 803079.8157700466 759645.7939098227 680193.1903260554 671141.0664069488 1.221013792032491 1.1038837271413662 1.0180838802404708 1.0951358559106514 1.098799347075626 1.10023419261586 1.1965886994062978 1.1318720190625449 1.0134876620910243 1.0 19.35625651122868 -7.773726010733647 14.123905769106422 1.0067008008961058 1.1169856655688333 0.42023949557642626 0.053397607864163414 1.4912021062867207 1696.6272498924602 0.05045817025456606 0.014159152588541975 1.68373596747477e-08 7.773726010733647 0.11028486467272747 VKEEASS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 5 VKEEASSPLK 10 1 Q9P2R6;A0A590UJ84;B1AKN3;Q9P2R6-2;D6RA28 Q9P2R6 RERE Arginine-glutamic acid dipeptide repeats protein 1 VKEEAS(0.084)S(0.916)PLK;VKEEAS(0.228)S(0.772)PLK;VKEEAS(0.064)S(0.936)PLK;VKEEAS(0.081)S(0.919)PLK;VKEEAS(0.017)S(0.983)PLK 160.48 5.0038000000000004e-05 12216650000.0 10593660.0 8475000.0 8757420.0 7940540.0 8216120.0 9566540.0 8603660.0 9535250.0 10652660.0 8759390.0 True False 10006008.56186236 8067848.278765645 9321937.305567427 8695206.534189606 8862681.900671927 9506831.675332157 9473401.916429872 9502174.443294078 8718405.475705402 8681788.619302308 1.1525284708747574 0.9292841178865282 1.073734654727929 1.001545524254929 1.0208359462896202 1.0950314609360015 1.0911808996786172 1.094495024005514 1.0042176627430992 1.0 23.049560866183942 -6.2371279304847755 24.53958058368176 1.065028197159848 1.0299083556135236 0.016924682507319155 0.06192533847837052 1776.1115538030247 1792781.0658543059 0.019254091671841885 0.019242457290037124 5.792580387730978e-07 6.2371279304847755 -0.035119841546324526 VKEEHLDVAS(ph)PDKAS(ph)S(ph)PELPVSVENIK ddPTM_KYSE-520_SHP099_60min_R1 1 VKEEHLDVASPDKASSPELPVSVENIK 27 2 Q969R5 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 3 VKEEHLDVAS(1)PDKAS(1)S(1)PELPVSVENIK 105.96 0.0046089 393030000.0 638280.0 591970.0 524090.0 552520.0 585530.0 552440.0 604160.0 587800.0 648310.0 586860.0 True False 602873.3360203652 563530.8726349148 557873.6799736492 605031.334678805 631607.8797900261 548992.0170427872 665234.3888333885 585761.0589935507 530593.2465651366 581660.8769701713 1.0364687739713354 0.9688306278570868 0.9591046983932839 1.0401788372468312 1.08586962747095 0.9438352118547944 1.1436808201688677 1.007049093699987 0.9122037729767175 1.0 19.14981874490959 -3.89083114267588 18.64177739516564 1.0108022156890497 3.821257356520676 0.01485102221328416 0.06551799742727588 1818.777207468982 309874.0862883938 0.015801152221243762 492.16693564197044 0.00012857864873008372 3.89083114267588 2.8104551408316265 VKEEHLDVASPDKAS(ph)S(ph)PELPVSVENIK ddPTM_KYSE-520_SHP099_60min_R1 2 VKEEHLDVASPDKASSPELPVSVENIK 27 2 Q969R5 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 2 VKEEHLDVAS(0.114)PDKAS(0.894)S(0.972)PELPVS(0.019)VENIK;VKEEHLDVAS(0.108)PDKAS(0.837)S(0.837)PELPVS(0.218)VENIK 106.78 0.00073246 330050000.0 345310.0 268000.0 247934.0 284000.0 281810.0 260040.0 300560.0 296810.0 321770.0 271110.0 True False 326154.965941581 255124.8777237987 263916.22234842577 310991.2746122867 303986.84372043674 258416.99390305992 330943.5379829239 295780.4353859749 263344.67916161136 268708.17632038816 1.2137887667128426 0.9494496267936644 0.9821666983208996 1.1573569471197753 1.1312898918192382 0.961701268051264 1.2316094825054034 1.1007496661854745 0.9800396949872424 1.0 18.035680695145576 -4.2230420087068925 22.788905847686472 1.0639988784881609 1.2137899947746502 0.20711474070537184 0.09171455080209155 11924.469458273099 7076755.015947363 0.023157135406185726 5.277650935839372 5.983537143305879e-05 4.2230420087068925 0.14979111628648933 VKEEHLDVASPDKAS(ph)SPELPVSVENIK ddPTM_KYSE-520_SHP099_60min_R1 1 VKEEHLDVASPDKASSPELPVSVENIK 27 2 Q969R5 Q969R5 L3MBTL2 Lethal(3)malignant brain tumor-like protein 2 1 VKEEHLDVAS(0.027)PDKAS(0.486)S(0.486)PELPVSVENIK 88.29299999999999 0.0038510999999999997 163820000.0 198400.0 189300.0 151310.0 179670.0 168110.0 186690.0 165310.0 176020.0 238970.0 158000.0 True False 187394.3564994054 180205.74385490702 161063.68470455977 196745.78278024463 181339.30058494213 185524.7984608609 182021.14807012602 175409.4277033768 195579.07194346943 156600.24292213985 1.1966415441167362 1.1507373200212954 1.0285021383053607 1.2563568172628234 1.157975857515766 1.1847031332710134 1.1623299215482392 1.1201095504723368 1.248906568048617 1.0 17.256726925011453 -10.683593829000785 6.181911341194466 0.9981839754132915 1.1641030379436295 0.39963394239845373 0.06142302210762501 0.0015096744277282585 7.726896060027834e-05 0.05840131459623046 0.014018703017143861 2.0720783402306442e-11 10.683593829000785 0.16591906253033795 VKEEPPS(ph)PPQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 VKEEPPSPPQSPR 13 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 2 VKEEPPS(1)PPQS(1)PR;VKEEPPS(1)PPQS(1)PR;VKEEPPS(1)PPQS(1)PR 221.34 6.228899999999999e-11 3131830000.0 3170670.0 2772300.0 2770650.0 2792380.0 2820520.0 3000320.0 2871130.0 3203190.0 3517500.0 2928980.0 True False 2994786.614526053 2639114.5466928617 2949250.5321967416 3057766.955640343 3042478.877436447 2981593.8899678052 3161371.839928503 3192078.881520169 2878810.6689590896 2903031.5159119572 1.0316066491566391 0.9090891821971182 1.0159209488534489 1.0533013296205216 1.0480350835876764 1.0270621843494414 1.088989844788299 1.099567422545673 0.9916567054749115 1.0 21.46912880357021 -4.993178329848087 24.2205332067428 1.048412102155638 0.9683871662015126 0.3215078418608698 0.04221509954966194 114.22605504630567 405548.74532939366 0.010591548467665354 0.021962046628454628 1.0158314868506348e-05 4.993178329848087 -0.08002493595412552 VKEEPPS(ph)PPQSPR ddPTM_KYSE-520_SHP099_60min_R1 9 VKEEPPSPPQSPR 13 1 E9PMQ6;Q00613-2;Q00613 E9PMQ6 HSF1 Heat shock factor protein 1 1 VKEEPPS(0.986)PPQS(0.014)PR;VKEEPPS(0.999)PPQS(0.001)PR;VKEEPPS(0.998)PPQS(0.002)PR;VKEEPPS(1)PPQSPR;VKEEPPS(0.996)PPQS(0.004)PR;VKEEPPS(0.724)PPQS(0.276)PR;VKEEPPS(1)PPQSPR;VKEEPPS(0.999)PPQS(0.001)PR;VKEEPPS(1)PPQSPR 132.01 4.439e-05 19220490000.0 19021310.0 16616430.0 14813980.0 13257180.0 13622830.0 14344980.0 11328470.0 11786290.0 14102500.0 12467520.0 True False 17966160.016258575 15818151.761030078 15768912.85400607 14517138.40128349 14694869.217700126 14255447.65881984 12473662.3028128 11745406.110930756 11541841.495094694 12357067.47238379 1.453917772676266 1.280089454587935 1.2761047788439488 1.174804494167175 1.1891874225451124 1.1536270794570513 1.0094354773646403 0.9505010907466511 0.9340275531301415 1.0 23.558833073714293 -5.548965886567706 0.43394352812537634 0.9296976086101292 1.4842170556772705 0.9011706073642942 0.050244864540411445 0.5734265197189186 0.17985366492199628 0.048008116246641884 0.14791708559760416 2.8251018753556645e-06 5.548965886567706 0.5545194470671413 VKEFLHNQGK ddPTM_KYSE-520_SHP099_60min_R1 1 VKEFLHNQGK 10 1 A6NKB8;Q9H4A4 A6NKB8 RNPEP Aminopeptidase B 0 70.942 0.022445 233120000.0 869320.0 735140.0 589510.0 745670.0 1038900.0 757330.0 716460.0 720190.0 755010.0 536900.0 False True 821097.0866535447 699822.770932364 627510.7578493501 816538.2526061394 1120655.519467589 752603.2225527001 788886.7687757711 717691.8289836103 617919.2162532489 532143.4837018793 1.5429994198962038 1.3151016452630717 1.179213458528223 1.5344324935182059 2.1059273556667466 1.4142862697804417 1.4824700347504889 1.3486810436744538 1.1611891062813866 1.0 19.021455771507526 -7.741691924199505 1.5225032396374605 1.0050342931720568 1.5142074255025146 0.3730345745553961 0.22656988037790132 0.4503546118037191 2.055751652748981 0.2329176516585471 0.07137384307161407 1.8126254601390366e-08 7.741691924199505 0.5091731323304578 VKEGMNIVEAMER ddPTM_KYSE-520_SHP099_60min_R1 5 VKEGMNIVEAMER 13 1 P62937;P62937-2 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed 0 ;;;; 136.39 1.5769e-05 3806290000.0 4415470.0 4001670.0 2950690.0 2788002.0 4010030.0 3873310.0 2704317.0 3144535.0 3372546.0 3059562.0 False True 4170535.077078779 3809423.766570872 3140896.198670927 3052972.87183663 4325596.547050364 3849135.2355586095 2977695.753950516 3133627.342024989 2760176.661366112 3032456.6609832197 1.375299152907451 1.256217051865709 1.0357596331327446 1.0067655413240955 1.4264330971997692 1.2693125297001264 0.98194173465452 1.0333626139965892 0.9102114127069418 1.0 21.532055596225977 -6.768517635593684 24.999999975907244 0.9841590917516801 1.2197516564807038 0.4799233639447277 0.12572172134200965 170.59583733685722 602527.9033268776 0.056386208701843396 0.038918680411683476 1.7040501207717538e-07 6.768517635593684 0.23559256472902368 VKELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(ph)SPQRDDLK ddPTM_KYSE-520_SHP099_60min_R1 1 VKELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGSSPQRDDLK 44 3 O00139-1;O00139-5;O00139;O00139-4;H0Y8H2;O00139-2 O00139-1 KIF2A Kinesin-like protein KIF2A 1 VKELTVDPTAAGDVRPIMHHPPNQIDDLETQWGVGS(0.5)S(0.5)PQRDDLK 216.67 1.1845999999999997e-23 334160000.0 241470.0 225640.0 262940.0 251130.0 194410.0 130810.0 172570.0 181650.0 242510.0 155240.0 True False 228075.1777414889 214799.91570745528 279889.53311887523 274997.31969501206 209708.9609584119 129993.56626849415 190015.05972089808 181019.8985474286 198476.2971796076 153864.69437489242 1.4823100170451196 1.3960312115792708 1.8190627437696811 1.7872671883062343 1.3629439931648941 0.8448563642011591 1.2349490602303153 1.1764875579993181 1.289940476507357 1.0 17.231302704845074 -5.994605726626338 7.1361634429926895 1.12495498752963 1.6152768382471843 0.6804777005087197 0.16523756499902698 0.08502844023267413 25.97306047562848 0.0552089524821184 0.06044320728656253 1.0124982316289561e-06 5.994605726626338 0.4903218507175542 VKEPS(ph)VQEATSTSDILK ddPTM_KYSE-520_SHP099_60min_R1 4 VKEPSVQEATSTSDILK 17 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 VKEPS(0.986)VQEAT(0.014)STSDILK;VKEPS(0.994)VQEAT(0.006)STSDILK;VKEPS(0.79)VQEAT(0.197)S(0.013)TSDILK;VKEPS(0.946)VQEAT(0.048)S(0.006)TSDILK 241.71 1.6733e-23 7552690000.0 8319910.0 8364830.0 6648760.0 5824020.0 5967730.0 8587630.0 6480390.0 8534740.0 9322170.0 8425170.0 True False 7858388.006970612 7962971.010934203 7077349.707992135 6377533.1097445395 6437356.399261075 8534031.415750388 7135491.063711608 8505134.978963291 7629498.920781907 8350529.5484830635 0.9410646308530395 0.9535887472406749 0.8475330416952765 0.763727985478845 0.770891996954908 1.0219748779046784 0.8544956367477107 1.0185144462494973 0.9136545025659915 1.0 22.993436258257706 -6.267924008130865 24.991726271187968 0.9561830270006948 0.8552927210218962 0.33892497908237296 0.07407390587731276 719.4662122238799 2772811.362247455 0.027593685583412388 0.02491076786466025 5.396050331269281e-07 6.267924008130865 -0.10089030597879856 VKEPSVQEAT(ph)STSDILK ddPTM_KYSE-520_SHP099_60min_R1 1 VKEPSVQEATSTSDILK 17 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 VKEPS(0.08)VQEAT(0.912)S(0.008)TSDILK 186.06 9.1102e-12 1546000000.0 537560.0 554470.0 417640.0 345140.0 382140.0 612520.0 408310.0 561390.0 627270.0 612450.0 True False 507740.4752007073 527832.4289235619 444561.7426476261 377942.00182987505 412212.24392082525 608697.0354772423 449585.95952158485 559442.6691194104 513373.58018989954 607024.1694788905 0.8364419420672906 0.8695410421247115 0.7323625071292749 0.6226144210276262 0.6790705620085858 1.0027558474315577 0.740639305857523 0.9216151468889169 0.845721811424104 1.0 19.211394434893297 -6.249033408335132 24.83162885266746 0.8871531792220143 0.7469227458958375 0.38320610781796205 0.09684333332389233 884.092952572995 1769590.1585962328 0.03359320582658181 0.0333575700807379 5.635942993656713e-07 6.249033408335132 -0.1402304333261768 VKESSIIAPAPAEDVDT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 4 VKESSIIAPAPAEDVDTPPR 20 1 Q15910-5;Q15910-3;Q15910-4;Q15910;Q15910-2 Q15910-5 EZH2 Histone-lysine N-methyltransferase EZH2 1 VKESSIIAPAPAEDVDT(1)PPR;VKESSIIAPAPAEDVDT(1)PPR;VKESSIIAPAPAEDVDT(1)PPR;VKESSIIAPAPAEDVDT(1)PPR 100.92 0.0021701 5652000000.0 5010020.0 5358100.0 4040140.0 2781220.0 2767950.0 3991080.0 2954140.0 3515970.0 4600520.0 4243100.0 True False 4732104.203372734 5100688.833327935 4300573.888852559 3045546.3125957153 2985771.9175188346 3966170.189304042 3252773.300828032 3503773.920703567 3765181.5376715506 4205509.435081844 1.1252154528291152 1.2128587302119962 1.0226047415273163 0.724180116489608 0.7099667623170433 0.9430891192916455 0.7734552379537651 0.8331389989225835 0.8952973702217543 1.0 22.003849141492992 -5.027392245336732 4.3130308735612415 0.8299603117795609 1.1632350748826594 0.6912371427833882 0.08912686425117246 0.10404978564892094 4.533824341456275 0.024036852019201655 0.04712387737018594 9.388749560606192e-06 5.027392245336732 0.33327476310309856 VKEVHDELEDLPS(ph)PPPPLS(ph)PPPT(ph)TSPHK ddPTM_KYSE-520_SHP099_60min_R1 4 VKEVHDELEDLPSPPPPLSPPPTTSPHK 28 1 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 3 VKEVHDELEDLPS(1)PPPPLS(1)PPPT(0.384)T(0.331)S(0.285)PHK;VKEVHDELEDLPS(1)PPPPLS(0.971)PPPT(0.377)T(0.342)S(0.31)PHK;VKEVHDELEDLPS(1)PPPPLS(1)PPPT(0.366)T(0.332)S(0.302)PHK;VKEVHDELEDLPS(0.998)PPPPLS(0.998)PPPT(0.354)T(0.334)S(0.315)PHK 118.46 0.00020258 2318330000.0 1935930.0 1773850.0 1496910.0 1977460.0 1756010.0 1858110.0 1939620.0 1911570.0 1990810.0 1830910.0 True False 1828540.1037192214 1688631.5833968672 1593403.213740683 2165397.203854972 1894197.996669829 1846512.8462590913 2135695.7184669888 1904939.2098337922 1629329.0882360926 1814689.5618264275 1.0076324580160443 0.9305346869892793 0.8780582901116007 1.1932604063008818 1.0438137941143932 1.0175364894922494 1.1768931520813284 1.049732830290009 0.8978555464859921 1.0 20.791291337424212 -5.236842786466021 24.996433477367027 1.059385559160041 0.937921102214181 0.2785930836249668 0.0848138589523758 1001.9815744605642 1018268.5397124797 0.02315323925601941 0.04007674982392746 5.796384861588441e-06 5.236842786466021 -0.12146445694585994 VKEVHDELEDLPS(ph)PPPPLS(ph)PPPT(ph)TSPHKQTEDK ddPTM_KYSE-520_SHP099_60min_R1 8 VKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDK 33 2 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 3 VKEVHDELEDLPS(1)PPPPLS(0.998)PPPT(0.381)T(0.339)S(0.24)PHKQT(0.043)EDK;VKEVHDELEDLPS(0.999)PPPPLS(0.912)PPPT(0.354)T(0.337)S(0.32)PHKQT(0.078)EDK;VKEVHDELEDLPS(1)PPPPLS(0.807)PPPT(0.398)T(0.377)S(0.353)PHKQT(0.064)EDK;VKEVHDELEDLPS(1)PPPPLS(0.944)PPPT(0.407)T(0.368)S(0.271)PHKQT(0.01)EDK;VKEVHDELEDLPS(1)PPPPLS(0.993)PPPT(0.355)T(0.322)S(0.293)PHKQT(0.037)EDK;VKEVHDELEDLPS(0.999)PPPPLS(0.742)PPPT(0.433)T(0.41)S(0.383)PHKQT(0.033)EDK;VKEVHDELEDLPS(0.994)PPPPLS(0.76)PPPT(0.396)T(0.382)S(0.365)PHKQT(0.103)EDK;VKEVHDELEDLPS(1)PPPPLS(0.863)PPPT(0.388)T(0.361)S(0.333)PHKQT(0.055)EDK 107.71 0.00022331 7895630000.0 5455910.0 5363310.0 5239100.0 5681570.0 4694404.0 4753210.0 4920211.0 4891650.0 6656300.0 4728060.0 True False 5153259.796213058 5105648.53710756 5576820.76885638 6221544.704573685 5063826.887294961 4723543.453276271 5417593.944511907 4874682.007869688 5447683.711668063 4686173.066775024 1.0996733843975333 1.089513439720487 1.1900586447385075 1.3276386970606036 1.0805889614272899 1.0079746065646196 1.1560806370816006 1.0402266280840529 1.1625016050500037 1.0 22.159978805208418 -5.9434317505056455 24.999999667543463 1.0769544131761648 1.1755284070659007 0.28716382123231154 0.07880966608384697 119.65198979570089 52878.66214767286 0.02517173935561475 0.02854206533581237 1.1391167803181698e-06 5.9434317505056455 0.09857399388973587 VKEVHDELEDLPS(ph)PPPPLS(ph)PPPTTS(ph)PHK ddPTM_KYSE-520_SHP099_60min_R1 1 VKEVHDELEDLPSPPPPLSPPPTTSPHK 28 1 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 3 VKEVHDELEDLPS(1)PPPPLS(0.999)PPPT(0.195)T(0.174)S(0.632)PHK 97.09899999999999 0.0048109 1506100000.0 525570.0 460260.0 386650.0 541420.0 504670.0 499970.0 474250.0 552030.0 570560.0 497320.0 True False 496415.58440218034 438148.4187356558 411574.07766187366 592876.3940161418 544384.657820492 496849.501775545 522191.81823396863 550115.1367747706 466960.68664713524 492914.13170910475 1.0071035753853006 0.8888940092190962 0.8349812902194611 1.20279853198859 1.1044208773907964 1.0079838856573151 1.0593971335805448 1.1160465918624205 0.9473469243578392 1.0 18.910976817698717 -5.246867560159021 24.997758184131865 1.0667429352338975 0.9081830650565135 0.4468150591206951 0.07752036686170932 723.152717719108 1240556.8822496617 0.02105658322055101 0.03627309700005854 5.664119923083546e-06 5.246867560159021 -0.15855987017738404 VKEVHDELEDLPS(ph)PPPPLS(ph)PPPTTS(ph)PHKQTEDK ddPTM_KYSE-520_SHP099_60min_R1 1 VKEVHDELEDLPSPPPPLSPPPTTSPHKQTEDK 33 2 H0YJ30;G3V582;F5H039;Q9NQX3;Q9NQX3-2 H0YJ30 GPHN Gephyrin;Molybdopterin adenylyltransferase;Molybdopterin molybdenumtransferase 3 VKEVHDELEDLPS(1)PPPPLS(0.713)PPPT(0.264)T(0.255)S(0.653)PHKQT(0.116)EDK 86.075 0.0012674000000000001 3089500000.0 813380.0 836940.0 735330.0 826290.0 585940.0 686370.0 647340.0 681930.0 860390.0 641340.0 True False 768260.1899671681 796732.1461274483 782730.5483695999 904820.3531668524 632050.1444574458 682086.1102339765 712779.4446295771 679564.5439936585 704164.8646668687 635658.22655497 1.2086057536466588 1.2533970502441834 1.231370122607721 1.423438438090608 0.99432386470151 1.0730390668120953 1.121324974416795 1.0690722083101862 1.1077727546816771 1.0 19.27789175663524 -5.7748600488015756 24.999999904207602 1.068001733621435 1.2739429713348405 0.724363064385614 0.0658458944113729 126.96712163865145 236513.28894927463 0.020319432913641744 0.023168544487174345 1.6793450991274587e-06 5.7748600488015756 0.20594123771340556 VKEYQVETIVDTLCTNMLSDK ddPTM_KYSE-520_SHP099_60min_R1 1 VKEYQVETIVDTLCTNMLSDK 21 1 Q86VP6-2;Q86VP6 Q86VP6-2 CAND1 Cullin-associated NEDD8-dissociated protein 1 0 214.35 6.4449e-19 87772000.0 187360.0 153860.0 104670.0 226080.0 148960.0 128810.0 133300.0 152420.0 119080.0 94613.0 False True 176966.76730709974 146468.3346514316 111417.19567792141 247566.57522656946 160682.30453353745 128006.0490103565 146775.26488263134 151891.29059509543 97458.07376251559 93774.80242780007 1.8871462559822674 1.561915683738196 1.188135754950854 2.6400116962888633 1.7134912617624698 1.3650367230462794 1.5651887402870068 1.6197452477923473 1.039277836256188 1.0 16.516912697854927 -7.620733753305217 0.8686300579780163 0.9696800865046546 1.7539131522382434 0.34330180653219955 0.3679481784712376 0.6986525553504253 1.0665982706297548 0.3575049776284717 0.13661740768501315 2.3947834420416022e-08 7.620733753305217 0.7842330657335888 VKFEER ddPTM_KYSE-520_SHP099_60min_R1 3 VKFEER 6 1 K7ELC7;P61353 K7ELC7 RPL27 60S ribosomal protein L27 0 ;; 97.071 0.01441 28846810000.0 12021000.0 10163300.0 7600160.0 6857490.0 10565700.0 9718300.0 7704070.0 8547600.0 8264300.0 8284000.0 False True 11354171.166730607 9675039.812575681 8090078.474285948 7509223.787820446 11397160.479390444 9657644.484879646 8482872.580077522 8517950.37062483 6763711.4460493615 8210610.204854476 1.3828656924935394 1.178358193993349 0.9853200033175044 0.9145756040617615 1.3881015168217263 1.1762395539334725 1.0331598222824014 1.0374320736342642 0.8237769516875074 1.0 22.969058015054863 -7.178714050082887 1.9177921899248773 0.9281260254584668 1.1583907250964067 0.30768636901558855 0.14803556242959284 0.5000548322861005 3.470893570553147 0.10798264525210668 0.04701799185581355 6.626526665261949e-08 7.178714050082887 0.23026469963793994 VKGEY(ph)DVTVPK ddPTM_KYSE-520_SHP099_60min_R1 2 VKGEYDVTVPK 11 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VKGEY(0.916)DVT(0.084)VPK;VKGEY(0.997)DVT(0.003)VPK 78.903 0.013557 949680000.0 4378900.0 3541700.0 2990900.0 2713200.0 3257300.0 3055400.0 2514300.0 2751700.0 3330200.0 2812100.0 True False 4135993.6878792685 3371551.4157999223 3183698.1996092037 2971061.7122466774 3513630.9784981995 3036330.1152569153 2768469.9812033046 2742154.994951611 2725519.627510324 2787186.981780694 1.4839311875792565 1.2096610086941086 1.142262151918916 1.065971437032369 1.2606369796738184 1.089388740369707 0.993284626865819 0.9838432128438285 0.9778746977962091 1.0 21.410378359939212 -1.0000000000000002 0.37239897731293486 0.9996399752852668 6.970705784570077 0.7795121641041144 0.07179926807192043 33.59457083650717 0.46361155339581406 0.061578440565021444 143.77654205088112 0.09999999999999995 1.0000000000000002 5.97106580928481 VKLEGK ddPTM_KYSE-520_SHP099_60min_R1 1 VKLEGK 6 1 Q9P2I0 Q9P2I0 CPSF2 Cleavage and polyadenylation specificity factor subunit 2 0 60.961000000000006 0.061502999999999995 1723700000.0 546230.0 467890.0 267020.0 213400.0 662800.0 893620.0 323040.0 361310.0 485440.0 1187000.0 False True 515929.53301749093 445411.8620827913 284232.53644710605 233681.4718389506 714958.5891838669 888042.5861084921 355696.035766581 360056.69994038827 397296.33294655365 1176484.1034720268 0.43853506519542884 0.37859573348105324 0.24159488054983672 0.1986269692461738 0.6077078194884988 0.7548275267704092 0.3023381571555917 0.3060446791229843 0.33769800354637786 1.0 20.16605039647626 -10.545410056044126 3.026919886277699 1.0253723341899665 0.3966953600940499 0.5590808217610999 0.16085764758486915 103960167.30626306 118286278.40977618 21533111.78527026 0.04483348474655574 2.8483276380348585e-11 10.545410056044126 -0.6286769740959166 VKLESPTVSTLTPS(ph)SPGK ddPTM_KYSE-520_SHP099_60min_R1 1 VKLESPTVSTLTPSSPGK 18 1 A0A087WTV6;A0A087WZR9;Q96C36 A0A087WTV6 PYCR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 1 VKLESPTVSTLTPS(0.624)S(0.376)PGK 191.99 1.0209999999999998e-12 1057900000.0 1934300.0 1951500.0 1519800.0 1329200.0 1652600.0 1975200.0 1626200.0 1957200.0 2422000.0 1968200.0 True False 1827000.5230685466 1857747.0107387817 1617768.7397659784 1455526.768361447 1782650.2179922422 1962872.0441367629 1790592.166182563 1950410.930013916 1982225.8536514353 1950763.2792364291 0.93655675320261 0.9523180134218766 0.8293003856414645 0.7461319288987086 0.9138219060028698 1.0062071933735974 0.9178931063760024 0.9998193787907208 1.016128340506451 1.0 20.895607290073812 -6.005489101512106 24.689348053667544 0.9809936590420405 0.8646558451167349 0.48839575076901265 0.058923526870390854 207.56597819455627 933615.2620390889 0.020400519176392046 0.022446687639092196 9.87440414952746e-07 6.005489101512106 -0.11633781392530562 VKLESPTVSTLTPSS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 1 VKLESPTVSTLTPSSPGK 18 1 A0A087WTV6;A0A087WZR9;Q96C36 A0A087WTV6 PYCR2 Pyrroline-5-carboxylate reductase;Pyrroline-5-carboxylate reductase 2 1 VKLESPTVSTLTPS(0.203)S(0.796)PGK 181.69 1.2754000000000002e-09 1387100000.0 1501200.0 1635500.0 1146900.0 1147100.0 1132800.0 1653900.0 1198500.0 1386800.0 1796500.0 1478000.0 True False 1417925.443431994 1556928.1250644512 1220831.0091048814 1256120.0391118077 1221944.9152496755 1643577.3966169457 1319656.0762328135 1381989.514481552 1470300.8860796033 1464906.0698666 0.9679292567619135 1.062817717183895 0.8333851802635066 0.8574747998867907 0.8341455745083715 1.1219677701018853 0.9008468893524255 0.9433980395803816 1.00368270452555 1.0 20.4823767309805 -6.22141008740138 24.999768632002933 0.9846209772121133 0.9122742123333687 0.19431500838088478 0.08323030523232988 1100.1699507462388 687096.9986521401 0.02909640099159137 0.029096019891829243 6.006063404139018e-07 6.22141008740138 -0.07234676487874458 VKLNFDMTAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 VKLNFDMTASPK 12 1 Q9ULU4-19;Q9ULU4-22;A0A087WVZ6;Q9ULU4-11;Q9ULU4-10;Q9ULU4-13;Q9ULU4;Q9ULU4-12;Q9ULU4-20;Q9ULU4-7;Q9ULU4-5;Q9ULU4-16;Q9ULU4-9;Q9ULU4-14;Q9ULU4-21;Q9ULU4-23;Q9ULU4-18;H7C4X9;Q9ULU4-4;Q9ULU4-3;Q9ULU4-6;Q9ULU4-15;Q9ULU4-17;Q9ULU4-8;A0A087WYS3;A0A087WV57 Q9ULU4-19 ZMYND8 Protein kinase C-binding protein 1 1 VKLNFDMT(0.001)AS(0.999)PK 92.38 0.0025781999999999997 0.0 476710.0 397930.0 432270.0 333080.0 449990.0 358270.0 364870.0 382380.0 500560.0 393680.0 True False 450265.9460021753 378812.8454948928 460134.8158564545 364735.8230558467 485401.65290713345 356033.9040364912 401754.6203880401 381053.6130281629 409670.92209073546 390192.30147840537 1.1539590717094006 0.9708362877986142 1.1792513950507042 0.9347591474098637 1.2440062273601709 0.9124575310366428 1.0296323604177378 0.9765790139487203 1.049920566188844 1.0 18.573825788189765 -6.304664449598037 24.998930254899648 0.9944987729399457 1.0851827846259396 0.23093150122784478 0.09267928717211035 766.9876642490079 443579.8815099734 0.03001752526191461 0.02647319765473573 4.958331400678443e-07 6.304664449598037 0.09068401168599394 VKPAPDETSFSEALLK ddPTM_KYSE-520_SHP099_60min_R1 1 VKPAPDETSFSEALLK 16 1 B4DY09;Q12905;X6R6Z1;A0A0A0MRL0 B4DY09 ILF2 Interleukin enhancer-binding factor 2 0 130.27 6.0992e-05 258580000.0 309410.0 310130.0 236310.0 220780.0 317740.0 327030.0 222490.0 288950.0 275520.0 264750.0 False True 292246.4105064571 295230.8892853796 251542.9207093683 241762.86482007246 342744.3303067012 324988.88446438086 244981.46049314836 287947.6998914369 225492.51329398993 262404.52097238327 1.11372475376373 1.1250983336390425 0.958607419480558 0.9213365071767066 1.3061677788042885 1.2385033735702453 0.9336022854535018 1.0973427547071184 0.8593316626496762 1.0 18.001433050826687 -6.791616534579993 24.98710506632452 0.9806810498587759 1.1046148876743924 0.23791393817632012 0.12036890762776817 378.87443682953585 313709.761456762 0.0541881710616828 0.03653887700994384 1.6157846031782986e-07 6.791616534579993 0.12393383781561651 VKPAPLEIKPLPEWEELQAPVRS(ph)PITR ddPTM_KYSE-520_SHP099_60min_R1 2 VKPAPLEIKPLPEWEELQAPVRSPITR 27 3 B7Z3B9;Q13480;Q13480-2 B7Z3B9 GAB1 GRB2-associated-binding protein 1 1 VKPAPLEIKPLPEWEELQAPVRS(0.999)PIT(0.001)R;VKPAPLEIKPLPEWEELQAPVRS(0.963)PIT(0.037)R 153.69 3.6242e-07 3318800000.0 692120.0 584230.0 684740.0 976590.0 1091830.0 1489380.0 1608860.0 1541210.0 2187690.0 1337830.0 True False 653726.7238929857 556162.7138528913 728879.4360227373 1069404.8199775093 1177750.8093370872 1480084.2269625412 1771499.2697604687 1535863.902231118 1790460.6431770069 1325977.8670159918 0.4930148082819406 0.4194358953400116 0.5496920078032846 0.806502767941459 0.8882130227313085 1.1162209142248758 1.3359945997794727 1.1582877364970336 1.3502945167601452 1.0 20.338625263769575 -5.721450251520852 1.044124230929433 1.2308597858290045 0.436592216481906 0.8970914897822029 0.10360744858873308 0.14329815092810888 0.33211382934320965 0.04414039985988177 0.07082350790396044 1.8991083727083688e-06 5.721450251520852 -0.7942675693470984 down VKPAS(ph)PVAQPK ddPTM_KYSE-520_SHP099_60min_R1 5 VKPASPVAQPK 11 1 Q96EV2;H0Y3K4 Q96EV2 RBM33 RNA-binding protein 33 1 VKPAS(1)PVAQPK;VKPAS(1)PVAQPK;VKPAS(1)PVAQPK;VKPAS(1)PVAQPK;VKPAS(1)PVAQPK 120.87 0.00034877 7378500000.0 14906940.0 14591920.0 11986760.0 10279820.0 10670840.0 14337520.0 11146900.0 14069750.0 16422940.0 14816570.0 True False 14080022.321951846 13890902.26028155 12759445.729094096 11256811.002059426 11510574.399225656 14248034.219446978 12273737.43526034 14020945.321154352 13440948.084626867 14685306.716917023 0.9587829926447564 0.9459048100289016 0.8688579663368968 0.7665356413081876 0.7838157296344261 0.9702238090154208 0.8357835264769357 0.9547601280266522 0.9152650566803148 1.0 23.807870062278393 -7.84495871913999 0.9606198596239901 0.9953173539061633 0.8724493401967212 0.23077997657930371 0.06801019700994393 0.8369412545710723 1.7013436197002725 0.06946870288881397 0.024204775055168267 1.4290297851849487e-08 7.84495871913999 -0.12286801370944211 VKPES(ph)TDEDLESVDAFQHLIYNPDK ddPTM_KYSE-520_SHP099_60min_R1 1 VKPESTDEDLESVDAFQHLIYNPDK 25 1 Q9H582;Q9H582-2 Q9H582 ZNF644 Zinc finger protein 644 1 VKPES(0.981)T(0.019)DEDLESVDAFQHLIYNPDK 199.2 1.0882e-15 111600000.0 121440.0 99303.0 112140.0 102640.0 103900.0 101390.0 120960.0 116250.0 137340.0 110510.0 True False 114703.48111536179 94532.33482315825 119368.72383034392 112394.87474015878 112076.33888986673 100757.18740128915 133187.81725583714 115846.75588295402 112402.51805965645 109530.96737547888 1.0472242130588623 0.86306491294919 1.0898171237832732 1.026147010597124 1.0232388298522204 0.9198968092364904 1.215983209563567 1.0576621266004547 1.026216792866749 1.0 16.7409792909556 -6.730071173186251 24.99990129641327 1.0797711912061247 0.9959288929958012 0.1908493453172525 0.08050653485408553 320.1392177323723 255144.94397801734 0.030242005227764622 0.023422937795670982 1.861781998511242e-07 6.730071173186251 -0.08384229821032352 VKPESTDEDLES(ph)VDAFQHLIYNPDK ddPTM_KYSE-520_SHP099_60min_R1 1 VKPESTDEDLESVDAFQHLIYNPDK 25 1 Q9H582;Q9H582-2 Q9H582 ZNF644 Zinc finger protein 644 1 VKPES(0.002)T(0.002)DEDLES(0.995)VDAFQHLIYNPDK 76.859 0.0094521 55476000.0 56234.0 54666.0 41642.0 48697.0 51165.0 60228.0 47339.0 51988.0 54582.0 59702.0 True False 53114.587920300204 52039.76330466111 44326.309949555754 53325.14823871309 55191.394410972425 59852.09471155778 52124.48810411775 51807.66576209043 44671.284700248805 59173.08672745314 0.8976139467751963 0.8794498678825461 0.7490957866321806 0.9011723266072763 0.9327110932235106 1.0114749461563852 0.8808816809607937 0.8755275181217553 0.7549257132047452 1.0 15.852653533894395 -4.24326515353713 19.83311930080516 0.8845806355161748 0.8976140971016919 0.0004844653651270292 0.08203909461740073 3491.62223138892 3809184.6697501396 0.02105907555794448 0.4549115266904404 5.711298334051797e-05 4.24326515353713 0.013033461585517103 VKPET(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 4 VKPETPPR 8 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VKPET(1)PPR;VKPET(1)PPR;VKPET(1)PPR;VKPET(1)PPR 92.611 0.010837000000000001 144297000000.0 4577710.0 4472680.0 3484190.0 2992520.0 3144080.0 4504060.0 3406560.0 4195090.0 4743820.0 4546060.0 True False 4323775.300861352 4257805.739170447 3708786.4623011067 3276928.201066051 3391501.208631883 4475948.4908437785 3750928.329621737 4180538.211931369 3882461.8699705848 4505785.445181159 0.9596052349730804 0.9449641557442728 0.8231165259472295 0.7272712473628 0.75269922411841 0.9933780792049717 0.8324693608376924 0.9278156412002184 0.8616615054591191 1.0 22.103347186816126 -6.2646490831006965 24.98880530762615 0.9128911674318899 0.839906729436507 0.18837310026534515 0.08325838748669381 609.603126274067 4745980.619940187 0.031221998656026127 0.028647942074269166 5.436894638529093e-07 6.2646490831006965 -0.0729844379953829 VKPET(ph)PPRQSHSGSIS(ph)PYPK ddPTM_KYSE-520_SHP099_60min_R1 1 VKPETPPRQSHSGSISPYPK 20 2 Q9UQ35;Q9UQ35-2;I3L4D8 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 VKPET(1)PPRQS(0.002)HS(0.004)GS(0.037)IS(0.957)PYPK 124.82 0.00016531 2441200000.0 2761600.0 4139300.0 4188200.0 3770700.0 2457800.0 2268500.0 1863900.0 1812100.0 4561600.0 1942300.0 True False 2608408.5428868863 3940441.814784027 4458178.073356934 4129066.194297708 2651214.8770309393 2254341.4500426524 2052321.2019110052 1805814.2480473192 3733328.4285781933 1925092.733086534 1.3549521527229393 2.0468841563108753 2.315825101167496 2.144866126878733 1.3771881382463074 1.1710300554863289 1.066089527344734 0.9380401354235162 1.9392979696061103 1.0 20.8764965124521 -5.862023952516397 4.837033553750191 1.2166944038859207 1.9946020339259054 0.5058440267608952 0.3486128863917573 0.17204629609039662 6.693492426312848 0.11092185979654312 0.1275452123221323 1.3739661949675495e-06 5.862023952516397 0.7779076300399848 VKPETPPR ddPTM_KYSE-520_SHP099_60min_R1 2 VKPETPPR 8 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 0 ; 130.75 0.0017332 395410000.0 342390.0 344030.0 226140.0 240290.0 225270.0 346790.0 267620.0 341000.0 371690.0 323750.0 False True 323396.9441624563 327502.28240044235 240717.34623679327 263127.08935417735 242997.46738903094 344625.5549747807 294673.64131950354 339817.15058999805 304200.46554240346 320881.82687368826 1.007838141889407 1.0206320675472849 0.7501744445363966 0.8200124385908416 0.7572802416282812 1.0739952409658866 0.9183244940683372 1.0590102714784264 0.9480140041154427 1.0 18.291682559408265 -6.2717758033407796 24.969375627567 0.9984604209902391 0.869923939191051 0.3159374997218677 0.09465397819259823 959.0573241696385 2316758.847571787 0.03546434435811718 0.031612686269727054 5.348403898058207e-07 6.2717758033407796 -0.12853648179918808 VKPFMTGAAEQIK ddPTM_KYSE-520_SHP099_60min_R1 1 VKPFMTGAAEQIK 13 1 Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;P13693-2;E9PJF7;Q56UQ5 Q5W0H4 TPT1 Translationally-controlled tumor protein;TPT1-like protein 0 112.5 0.00016269 405540000.0 633920.0 496650.0 332700.0 397720.0 497700.0 540970.0 420460.0 533400.0 456300.0 544230.0 False True 598755.1939118094 472790.1885131515 354146.3743388214 435519.18922112155 536866.1584743672 537593.6055673672 462964.2000941577 531549.7598964957 373447.4223869325 539408.5456045336 1.110021705794008 0.8764974013959667 0.6565457244321508 0.8074013524072375 0.9952867132883164 0.99663531463868 0.8582811745692643 0.9854307356231624 0.6923275973842742 1.0 19.041018852153492 -4.262713760972477 8.009029586167665 0.8718987803748001 1.1118846145569294 0.2589340825727926 0.11960702017264187 0.1289699883635253 105.32212871253064 0.030652664323703904 0.171959147023797 5.461176830503803e-05 4.262713760972477 0.23998583418212938 VKPFVVR ddPTM_KYSE-520_SHP099_60min_R1 1 VKPFVVR 7 1 A0A494C039;Q9Y4L1;E9PJ21;A0A087WWI4;K7EQK2;A0A087X054;Q9Y4L1-2 A0A494C039 HYOU1 Hypoxia up-regulated protein 1 0 91.906 0.0077381 301150000.0 629430.0 465630.0 416850.0 355850.0 597960.0 493880.0 429010.0 451700.0 455330.0 411090.0 False True 594514.2631624023 443260.43587512063 443720.8179835823 389669.87700979627 645016.0500730005 490797.5117245159 472378.51753411605 450133.1581275726 372653.54993522173 407448.0624231803 1.4591166776611957 1.0878943275345487 1.089024243592374 0.9563669899234435 1.5830632405930531 1.2045645985052393 1.1593588511006299 1.1047620534763007 0.9146038091799278 1.0 18.636256644553544 -7.45910358239227 2.1078361887848422 0.9589409825323111 1.2163489563246492 0.26535400090262595 0.1737309375756688 0.4992789798252702 4.059223888063052 0.14573219385523442 0.05026250474944724 3.474532814254375e-08 7.45910358239227 0.25740797379233815 VKPLLQVSR ddPTM_KYSE-520_SHP099_60min_R1 1 VKPLLQVSR 9 1 P35579;P35579-2 P35579 MYH9 Myosin-9 0 113.44 0.0038953000000000004 0.0 668810.0 633560.0 495180.0 438610.0 685880.0 622350.0 454190.0 516310.0 507090.0 455570.0 False True 631709.7760603189 603122.826607052 527100.0951160126 480295.36252709484 739854.8538766304 618465.6828009887 500103.9576672348 514519.0411176596 415015.2386986396 451534.0042280965 1.3990303501952979 1.3357196157088957 1.167354153132049 1.0636969929832112 1.6385362939418533 1.3696990193645862 1.107566546449075 1.139491237204243 0.9191228895553808 1.0 18.784475113048753 -7.101080956708684 1.9771166020219366 0.9998810222692945 1.3206367492412918 0.46675515271122947 0.1510583319082907 0.35152091094765714 2.644795293968255 0.10292504761801863 0.04866756965469226 7.923536143051037e-08 7.101080956708684 0.3207557269719973 VKPPGGHS(ph)PQVNHLK ddPTM_KYSE-520_SHP099_60min_R1 3 VKPPGGHSPQVNHLK 15 1 Q92610 Q92610 ZNF592 Zinc finger protein 592 1 VKPPGGHS(1)PQVNHLK;VKPPGGHS(1)PQVNHLK;VKPPGGHS(1)PQVNHLK 202.35 9.1209e-12 7963410000.0 6202440.0 5351190.0 5795940.0 5127310.0 5274640.0 5332200.0 5493810.0 5429760.0 6443790.0 4618620.0 True False 5858378.288942397 5094110.800100053 6169555.5662318915 5614608.000818036 5689724.1594037255 5298919.7619208405 6049177.9292186815 5410925.42987551 5273760.170726917 4577702.620031987 1.2797638412128791 1.112809464251406 1.3477405760771723 1.2265121758343496 1.242921314832803 1.1575500205567772 1.3214440585868403 1.1820176798285993 1.152053903119217 1.0 22.126192313882203 -8.094259764071635 1.5863543433753278 1.0011443587607411 1.2367153369631652 0.540958723929834 0.0668857968976525 0.37172033885988404 2.0153203023764186 0.060468585234019795 0.01755716821756709 8.048968651314607e-09 8.094259764071635 0.235570978202424 VKPPPQIS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 1 VKPPPQISPSK 11 1 Q9H6U6-7;Q9H6U6-3;Q9H6U6-8;K7ESE9;Q9H6U6-6;Q9H6U6-2;Q9H6U6 Q9H6U6-7 BCAS3 Breast carcinoma-amplified sequence 3 1 VKPPPQIS(0.906)PS(0.094)K 97.417 0.001973 0.0 717160.0 615430.0 477900.0 480780.0 486310.0 552720.0 523330.0 565460.0 675190.0 597980.0 True False 677377.7051769838 585863.8190207367 508706.19866703544 526473.1866482227 524579.8302746025 549270.2694589257 576233.3036086089 563498.5512393562 552592.5161547946 592682.3624213998 1.1429017432028208 0.9884954507962647 0.8583116875432563 0.8882889386100846 0.8850943836618238 0.9267531890351616 0.9722464175488733 0.9507597778634522 0.9323586311851455 1.0 19.176899599555306 -2.246530478464942 10.533444431455127 0.9473789006729396 1.0144353415789857 0.0 0.07698930969438934 0.0 0.0 0.01836305705728332 0.0 0.005668517888887228 2.246530478464942 0.06705644090604612 VKPPPS(ph)PTTEGPSLQPDLAPEEAAGTQR ddPTM_KYSE-520_SHP099_60min_R1 1 VKPPPSPTTEGPSLQPDLAPEEAAGTQR 28 1 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 VKPPPS(0.333)PT(0.333)T(0.333)EGPSLQPDLAPEEAAGTQR 159.36 3.9324e-10 710200000.0 263930.0 266090.0 180980.0 236810.0 208490.0 318090.0 237840.0 300090.0 303030.0 271670.0 True False 249289.27676858928 253306.63699076753 192646.26037823828 259316.35120047754 224896.9768541708 316104.6823205054 261883.18829471187 299049.0578315326 248007.39076465473 269263.21515606204 0.9258200256730349 0.9407398513159465 0.7154570306478091 0.9630589571998559 0.8352309717605613 1.1739616276114602 0.9725917747172677 1.1106197987653346 0.9210593085316624 1.0 18.03865762690268 -6.23827502286164 24.99174305930252 1.0386193340074121 0.8755653435538436 0.42847852960297794 0.0921211093455366 737.9647222264897 796181.7220859522 0.028988250293103868 0.028970333844847245 5.777300761458005e-07 6.23827502286164 -0.1630539904535685 VKPPPS(ph)PTTEGPSLQPDLAPEEAAGTQRPK ddPTM_KYSE-520_SHP099_60min_R1 7 VKPPPSPTTEGPSLQPDLAPEEAAGTQRPK 30 2 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 VKPPPS(0.86)PT(0.112)T(0.019)EGPS(0.009)LQPDLAPEEAAGTQRPK;VKPPPS(0.777)PT(0.111)T(0.111)EGPS(0.001)LQPDLAPEEAAGTQRPK;VKPPPS(0.674)PT(0.163)T(0.163)EGPSLQPDLAPEEAAGTQRPK;VKPPPS(0.799)PT(0.2)T(0.001)EGPSLQPDLAPEEAAGTQRPK;VKPPPS(0.453)PT(0.453)T(0.093)EGPSLQPDLAPEEAAGTQRPK;VKPPPS(0.763)PT(0.202)T(0.036)EGPSLQPDLAPEEAAGTQRPK;VKPPPS(0.894)PT(0.092)T(0.013)EGPSLQPDLAPEEAAGTQRPK 263.33 2.8078e-41 72178530000.0 6582040.0 6673600.0 5469010.0 4925850.0 4840700.0 7050720.0 5613760.0 7184290.0 7731690.0 7786840.0 True False 6216921.120228561 6352990.238722176 5821551.135325395 5394001.302989197 5221635.550184585 7006713.841148213 6181253.6458178675 7159369.374815891 6327809.9960438805 7717854.655669846 0.8055245139478444 0.8231549468290408 0.7542965493718711 0.6988990520865208 0.6765656757151499 0.9078577083595115 0.800903090508043 0.9276372378373737 0.8198923507059332 1.0 22.879768444310006 -6.27560149679078 24.992065341323286 0.8810882237912355 0.7528707074368645 0.5246535741720175 0.066066445495976 727.0313030971345 1282997.328937833 0.023566865368025006 0.020885317766628053 5.301496795207285e-07 6.27560149679078 -0.12821751635437106 VKPPPSPT(ph)TEGPSLQPDLAPEEAAGTQR ddPTM_KYSE-520_SHP099_60min_R1 1 VKPPPSPTTEGPSLQPDLAPEEAAGTQR 28 1 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 VKPPPS(0.269)PT(0.365)T(0.365)EGPS(0.002)LQPDLAPEEAAGTQR 135.45 7.309400000000001e-06 595830000.0 142040.0 152050.0 106170.0 117970.0 98998.0 153890.0 141000.0 141220.0 162620.0 176920.0 True False 134160.7580502798 144745.28976829696 113013.88807800609 129181.83333102614 106788.5793784315 152929.51542740304 155253.6560273895 140730.14078099592 133092.3073165962 175352.62644167698 0.7650912379969526 0.8254526476479088 0.644494983458916 0.7366974533112713 0.6089933270201107 0.8721256050206242 0.8853797013358536 0.8025550779406395 0.7589980829905805 1.0 17.419899513958278 -6.2906902533379 24.761500986024867 0.8528194065119687 0.7193796525544098 0.4498753271373075 0.08115280266444412 670.5744597668145 567653.547134347 0.02871105187830358 0.025324460167554755 5.120469064317114e-07 6.2906902533379 -0.13343975395755892 VKPPPSPT(ph)TEGPSLQPDLAPEEAAGTQRPK ddPTM_KYSE-520_SHP099_60min_R1 3 VKPPPSPTTEGPSLQPDLAPEEAAGTQRPK 30 2 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 VKPPPS(0.116)PT(0.441)T(0.441)EGPS(0.003)LQPDLAPEEAAGTQRPK;VKPPPS(0.367)PT(0.609)T(0.025)EGPSLQPDLAPEEAAGTQRPK;VKPPPS(0.363)PT(0.558)T(0.079)EGPSLQPDLAPEEAAGTQRPK 268.23 2.1304e-41 22553300000.0 5304730.0 5254120.0 4468360.0 3967000.0 4058570.0 5754770.0 4817080.0 5937810.0 6988000.0 5975500.0 True False 5010466.052182916 5001704.188605097 4756397.635228787 4344022.48727796 4377956.368895538 5718852.345806451 5304037.456570338 5917213.123005272 5719155.353144604 5922561.718868655 0.8459964268873891 0.8445170225360753 0.8030980276786998 0.7334701930481137 0.7391997883192728 0.9656045166379258 0.8955647418028986 0.9990969117558803 0.9656556781711502 1.0 22.497789897157226 -6.272063024195343 24.80683873116339 0.9607767121832477 0.7933294236079862 0.7926201187211798 0.04394220674101101 326.83214861771245 763170.331442198 0.016926930239500735 0.015081545188556275 5.344867898086529e-07 6.272063024195343 -0.16744728857526148 VKPPPSPTTEGPS(ph)LQPDLAPEEAAGTQRPK ddPTM_KYSE-520_SHP099_60min_R1 1 VKPPPSPTTEGPSLQPDLAPEEAAGTQRPK 30 2 Q9Y2D5-5;Q9Y2D5-7;Q9Y2D5-6;Q9Y2D5-4;Q9Y2D5 Q9Y2D5-5 AKAP2 A-kinase anchor protein 2 1 VKPPPS(0.002)PTT(0.005)EGPS(0.993)LQPDLAPEEAAGTQRPK 86.604 0.0012956 684260000.0 431660.0 437140.0 373400.0 320440.0 349660.0 524400.0 394350.0 498840.0 584480.0 547540.0 True False 407714.9593071237 416139.1382394828 397469.9614611236 350894.52125620097 377176.2527067456 521127.0250836966 434214.7464851139 497109.64047013083 478353.1655417799 542689.2215796745 0.7512862667888187 0.7668092928548935 0.7324080627659367 0.6465846515890028 0.6950133478030956 0.9602678740638811 0.8001167688961831 0.9160116337360278 0.8814495415062354 1.0 19.049766729850177 -6.254046347350302 24.994744975702336 0.899354117201422 0.7178948194534627 0.7335080410262815 0.0579768366638685 321.9885573179995 1088596.5614327695 0.01943691441116085 0.01906442560224346 5.57126289955918e-07 6.254046347350302 -0.18145929774795932 VKPTTQSEVSPLFAGTDVIPAHQFPDELAAYHPT(ph)PPLS(ph)PELPGSCR ddPTM_KYSE-520_SHP099_60min_R1 2 VKPTTQSEVSPLFAGTDVIPAHQFPDELAAYHPTPPLSPELPGSCR 46 1 H3BV44;H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4 H3BV44 MYO9A Unconventional myosin-IXa 2 VKPTTQSEVSPLFAGTDVIPAHQFPDELAAY(0.074)HPT(0.927)PPLS(0.998)PELPGS(0.001)CR;VKPTTQSEVSPLFAGTDVIPAHQFPDELAAY(0.006)HPT(0.994)PPLS(0.986)PELPGS(0.014)CR 100.61 2.4985999999999998e-05 310830000.0 96374.0 92872.0 98221.0 103262.0 86012.0 92652.0 62852.0 77979.0 105873.0 76300.0 True False 91027.94210319407 88410.289716286 104552.48281915649 113075.98943314761 92780.6550586643 92073.72450048561 69205.6935364078 77708.50904943551 86649.13204113877 75624.0413605017 1.203690525731911 1.1690765016753328 1.3825296947666708 1.4952386489649705 1.226867189183617 1.2175192285951482 0.9151282091167612 1.0275635585117318 1.1457881710933722 1.0 16.206557328781518 -6.580357682333978 4.355839009281321 1.025000557628842 1.298591144029228 0.6133565855035951 0.1024784217859806 0.15789257837699738 6.1891701770292356 0.04408290607471483 0.03406369554438493 2.628102610751787e-07 6.580357682333978 0.273590586400386 VKQELLEEVKK ddPTM_KYSE-520_SHP099_60min_R1 1 VKQELLEEVKK 11 2 P50552 P50552 VASP Vasodilator-stimulated phosphoprotein 0 47.711999999999996 0.060301 285350000.0 215110.0 204630.0 169320.0 160870.0 251950.0 201240.0 146590.0 229620.0 165900.0 180200.0 False True 203177.419488846 194799.2676441081 180234.63812157867 176159.03643267072 271777.03160059603 199983.98651381218 161408.74778053243 228823.5018137106 135776.74199866757 178603.56819347854 1.137588803762011 1.0906795962390012 1.009132347940178 0.9863130855361204 1.5216775025803746 1.1197087971790831 0.9037263332033814 1.28118102078358 0.7602129306374366 1.0 17.446401377760527 -7.7664529991257485 24.999962002573504 0.8801064800327598 1.1260420047715334 0.25552958899540856 0.17128481045699112 190.18377786557636 948280.7675830384 0.1494559534814524 0.04334068919564341 1.712170463777903e-08 7.7664529991257485 0.24593552473877356 VKQIESK ddPTM_KYSE-520_SHP099_60min_R1 2 VKQIESK 7 1 P10599;P10599-2 P10599 TXN Thioredoxin 0 ; 80.438 0.028973000000000002 0.0 392300.0 374210.0 270390.0 474570.0 390770.0 368840.0 304120.0 282765.0 357710.0 369900.0 False True 370538.33696933865 356232.3898993382 287819.77203929634 519672.99011532706 421521.37582284224 366537.93274574867 334863.4175251757 281784.15421284706 292758.88113528286 366622.97377784504 1.0106795358489076 0.971658666745737 0.7850565638958036 1.4174588808780504 1.1497407581398946 0.9997680422718193 0.9133727056834305 0.7685938262657648 0.7985284667749161 1.0 18.483937667070983 -6.785379740402381 2.7635106595384404 0.8394522520304148 1.064927739541223 0.2509992691254187 0.16005607605582142 0.38212616136805766 5.964577122577625 0.07801012317988665 0.051902137210911276 1.6391558937561852e-07 6.785379740402381 0.22547548751080826 VKQNS(ph)ESERR ddPTM_KYSE-520_SHP099_60min_R1 3 VKQNSESERR 10 2 Q9BVA0 Q9BVA0 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 1 VKQNS(0.572)ES(0.428)ERR;VKQNS(0.756)ES(0.244)ERR;VKQNS(0.686)ES(0.314)ERR 66.98899999999999 0.021019 1538030000.0 1094810.0 1001470.0 792100.0 885030.0 1022730.0 1172330.0 1036780.0 1038570.0 1171950.0 1227260.0 True False 1034078.7068503737 953357.8779628832 843160.0334048107 969142.9851060283 1103213.0324623042 1165013.0536162655 1141587.8403977086 1034967.4430740598 959153.4224553268 1216387.431193831 0.8501228147642653 0.7837616975598015 0.6931673345040125 0.7967387365675563 0.9069585924441435 0.9577647908387678 0.938506771051794 0.8508534505805314 0.788526252292791 1.0 20.214171383663125 -5.709461755328006 4.811434538333781 0.9040270490642283 0.7723128939085131 0.47640448536877544 0.06486232751394795 0.18817938888823452 9.154115111179507 0.020592204136603533 0.026261451736438797 1.9522626458686804e-06 5.709461755328006 -0.13171415515571516 VKQNSES(ph)ERR ddPTM_KYSE-520_SHP099_60min_R1 2 VKQNSESERR 10 2 Q9BVA0 Q9BVA0 KATNB1 Katanin p80 WD40 repeat-containing subunit B1 1 VKQNS(0.006)ES(0.994)ERR;VKQNS(0.056)ES(0.944)ERR 88.101 0.0029968000000000004 1069430000.0 304650.0 255100.0 222030.0 293790.0 283010.0 317960.0 277710.0 300090.0 331320.0 341510.0 True False 287750.4571952815 242844.61308709343 236342.4090605604 321711.71326881595 305281.2768933703 315975.49369872623 305783.6369884137 299049.0578315326 271160.63989751966 338484.4870907596 0.8501141652560446 0.7174468028780835 0.6982370480015194 0.950447437145188 0.9019062572622824 0.933500664726186 0.9033904023684912 0.8834941311545159 0.8011021191196037 1.0 18.36873019033435 -5.26341867477483 24.99768636757638 0.9059922721143716 0.7514840825557989 0.5780591446560588 0.06068252394805548 123.39750134230614 1558466.0852660078 0.016778084853705338 0.026372887104603566 5.452319853180968e-06 5.26341867477483 -0.1545081895585727 VKS(ph)LQADTTNTDTALTTLEEALAEK ddPTM_KYSE-520_SHP099_60min_R1 1 VKSLQADTTNTDTALTTLEEALAEK 25 1 X6RM00;G8JLD3;X6RLX0;Q8IUD2-5;Q8IUD2-4;Q8IUD2-2;Q8IUD2-3;Q8IUD2 X6RM00 ERC1 ELKS/Rab6-interacting/CAST family member 1 1 VKS(0.764)LQADT(0.079)T(0.079)NT(0.079)DTALTTLEEALAEK 209.47 3.0278e-21 38242000.0 45102.0 52590.0 44375.0 41106.0 44200.0 54239.0 40239.0 54692.0 59817.0 67788.0 True False 42600.102151392035 50063.49746080066 47235.48350251038 45012.70188103044 47678.2885364015 53900.47428206449 44306.75081479525 54502.28621720877 48955.74066385958 67187.45105826597 0.6340484938839037 0.7451316677780325 0.7030402665751831 0.6699569811331992 0.7096308579269389 0.8022402016013553 0.659449794819151 0.8111974090212705 0.7286441127436792 1.0 16.035904178228805 -13.999999999993827 0.19463314447882324 2.2505740255277065 0.6715151825033933 0.7606137212221845 0.04922111731380306 62.692526737117674 0.6167052817326777 30.336457154566375 0.11964239801177279 1.0000000000142135e-14 13.999999999993827 -1.5790588430243133 VKS(ph)PGGPGSHVR ddPTM_KYSE-520_SHP099_60min_R1 2 VKSPGGPGSHVR 12 1 A0A1W2PPI7;O75382-4;O75382-3;O75382-2;O75382 A0A1W2PPI7 TRIM3 Tripartite motif-containing protein 3 1 VKS(0.992)PGGPGS(0.008)HVR;VKS(1)PGGPGSHVR 85.57600000000001 0.0022081 5651700000.0 1584640.0 1475320.0 1351200.0 1397360.0 1426010.0 1304540.0 1204270.0 1517610.0 1788650.0 1434210.0 True False 1496736.8602984748 1404443.4126995325 1438300.5139964384 1530164.674268395 1538228.874112982 1296397.8819654572 1326009.3641425846 1512345.765122835 1463876.2481972068 1421504.015198497 1.052924820679787 0.9879982030887319 1.011816005173644 1.0764406276085858 1.082113632931375 0.9119903061156178 0.9328213990007072 1.0639053769479876 1.029808029063353 1.0 20.43898674340031 -6.234079589752249 24.988784411887387 0.9882688477694139 1.0394519208696882 0.24135601974257692 0.048226325016915116 1314.5215076344002 1200605.9026313752 0.017594524387574317 0.017590448663220938 5.833381906506374e-07 6.234079589752249 0.05118307310027426 VKS(ph)PQRPSDWSK ddPTM_KYSE-520_SHP099_60min_R1 2 VKSPQRPSDWSK 12 2 Q5UIP0;Q5UIP0-2;H7BZN3 Q5UIP0 RIF1 Telomere-associated protein RIF1 1 VKS(0.997)PQRPS(0.003)DWSK;VKS(0.639)PQRPS(0.359)DWS(0.003)K 118.31 0.00010398 13200400000.0 2016880.0 1986110.0 1751920.0 1841500.0 1968880.0 1831200.0 2021850.0 1699950.0 2162800.0 1784800.0 True False 1904999.6458493997 1890694.2943881103 1864851.5663711112 2016515.6063328367 2123819.654605208 1819770.8015508503 2226238.32935445 1694053.2702213116 1770090.0397511635 1768988.0605533894 1.0768866609837164 1.0687999181840988 1.0541911547937373 1.1399260692025326 1.2005845047596406 1.0287072265380777 1.2584812633828744 0.9576397421763061 1.0006229432647664 1.0 20.75449288019113 -7.312987218983494 24.999932895343154 0.9843484008455898 1.114420964557624 0.4509111322188617 0.06672019186261663 331.8213222003967 160926.77564480258 0.03563800739143461 0.01711996228520123 4.8642152056365644e-08 7.312987218983494 0.13007256371203413 VKS(ph)PVEK ddPTM_KYSE-520_SHP099_60min_R1 1 VKSPVEK 7 1 Q96B01-2;Q96B01;Q96B01-3;H0YGT5 Q96B01-2 RAD51AP1 RAD51-associated protein 1 1 VKS(1)PVEK 68.847 0.019544 7651100000.0 9796800.0 7730700.0 7011000.0 8017600.0 8096800.0 9287600.0 9567400.0 7787300.0 8929300.0 8854300.0 True False 9253351.974563379 7359305.567982726 7462940.277996622 8779590.29342067 8733972.095509853 9229632.643339714 10534566.160825867 7760287.673869478 7307964.209335167 8775857.79054117 1.0544099728389928 0.8385853262019312 0.8503943951826974 1.000425314877313 0.9952271679839135 1.051707179358311 1.2004030161222843 0.8842768261620764 0.8327350310088053 1.0 23.065108716926797 -3.906234706449206 19.673618910289086 0.9657850288949844 7.253239641495236 0.059801571004344356 0.10931894664530838 1424.180063333402 302031.48757624935 0.028631810048760736 4299.450602112579 0.00012409814607746987 3.906234706449206 6.287454612600252 VKS(ph)PVSLTAHSLIGAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 VKSPVSLTAHSLIGASPK 18 1 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 2 VKS(0.773)PVS(0.097)LT(0.126)AHS(0.005)LIGAS(0.999)PK 88.014 0.00099133 301570000.0 316100.0 426660.0 362370.0 641170.0 317640.0 352870.0 287310.0 264150.0 464750.0 288250.0 True False 298565.3028702727 406162.6131702837 385728.9500125 702106.60402521 342636.4608756232 350667.60743951943 316354.0986753854 263233.72530307353 380363.1153940971 285696.32925510674 1.0450442385756902 1.4216584939304873 1.350136177871824 2.457527563815068 1.1993029863875952 1.2274137660564686 1.1073089370808942 0.921375944834154 1.331354576328699 1.0 18.124122974486124 -5.972114343125544 24.99982931260901 1.1232082028495471 1.578232724133901 0.2717549038319048 0.3527528767814289 297.3044101054012 266535.6915895815 0.11236479577849846 0.12740737633344576 1.066315339673385e-06 5.972114343125544 0.4550245212843538 VKS(ph)S(ph)TPPRQS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 2 VKSSTPPRQSPSR 13 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 VKS(0.719)S(0.641)T(0.641)PPRQS(0.732)PS(0.268)R;VKS(0.969)S(0.487)T(0.487)PPRQS(0.597)PS(0.459)R 56.215 0.03687 2044760000.0 2011640.0 1820160.0 1700450.0 1860390.0 1704640.0 1749040.0 1657090.0 1818400.0 2252330.0 1774500.0 True False 1900050.3190950805 1732716.7814841405 1810063.727816199 2037200.90625335 1838785.469925144 1738123.5925865546 1824604.8288399072 1812092.394817752 1843363.6486188008 1758779.3105401078 1.0803233286338747 0.985181467112003 1.0291590974312417 1.1583038838612112 1.0454895954856707 0.9882556510474245 1.0374268209236468 1.030312549140274 1.048092638781791 1.0 20.746143035895294 -6.006393541187992 24.997555638327583 1.0229859741435716 1.0610648263213232 0.17175145220976318 0.04385167691131031 638.8695397234081 2497878.6640125047 0.014670763517736302 0.01605629539436736 9.853861613774093e-07 6.006393541187992 0.03807885217775153 VKS(ph)S(ph)TPPRQSPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 VKSSTPPRQSPSR 13 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 VKS(0.918)S(0.636)T(0.411)PPRQS(0.091)PS(0.945)R 87.15700000000001 0.021966 0.0 315340.0 305360.0 302960.0 313610.0 325650.0 299570.0 293620.0 310000.0 364330.0 288490.0 True False 297847.4615852949 290690.0472452955 322489.28635313886 343415.4001097153 351276.8023049581 297700.27251015045 323301.97505505104 308924.6823545437 298176.8560119021 285934.2030418234 1.0416643354196033 1.016632652382536 1.1278443884027702 1.201029455225698 1.2285232006804625 1.0411495698771163 1.1306866111703393 1.080404789172275 1.0428163292108428 1.0 18.125323677852627 -7.816443581554199 1.4613584413831153 1.0003754523887696 1.1156141475814934 0.24959280888124913 0.06431136091175527 0.5983094512065268 2.6708906681858764 0.06731815800275769 0.020521746763847416 1.526006622815326e-08 7.816443581554199 0.11523869519272378 VKS(ph)ST(ph)PPRQS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 2 VKSSTPPRQSPSR 13 2 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 3 VKS(0.757)S(0.246)T(0.996)PPRQS(0.959)PS(0.041)R;VKS(0.906)S(0.11)T(0.982)PPRQS(0.834)PS(0.168)R 119.51 0.00015252 2524100000.0 4417300.0 3999400.0 3705900.0 3945100.0 3842300.0 3797200.0 3971500.0 4011000.0 4626600.0 3798700.0 True False 4172263.563330766 3807262.82077821 3944788.2436496536 4320041.117862434 4144667.150303513 3773500.2663001786 4372977.978104812 3997086.7771744337 3786526.0670948545 3765046.4733438795 1.1081572545969722 1.011212702879823 1.0477395887616066 1.1474071166047635 1.1008276204948084 1.0022453356196666 1.161467198098356 1.061630130059051 1.005705000961621 1.0 21.844236242043145 -7.712979200376856 4.281671044160515 1.000963449212087 1.080641338098591 0.28825568883166086 0.0492817740035556 0.26875230565546504 9.903612125411275 0.040288973956447115 0.0128025059440735 1.9365147070351766e-08 7.712979200376856 0.07967788888650418 VKSGT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 5 VKSGTPPR 8 1 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VKS(0.207)GT(0.793)PPR;VKS(0.016)GT(0.984)PPR;VKS(0.042)GT(0.958)PPR;VKS(0.036)GT(0.964)PPR;VKS(0.035)GT(0.965)PPR 94.363 0.010024 13966790000.0 9222760.0 9831790.0 9547980.0 6282160.0 6659080.0 7742230.0 6120810.0 6126610.0 10577500.0 7131960.0 True False 8711155.117683744 9359456.050582353 10163458.06810814 6879214.597599721 7183111.711017649 7693907.870735595 6739561.208148984 6105358.219871525 8656892.637075998 7068776.382980914 1.2323427203974213 1.3240560379186102 1.4377959518677252 0.9731832250575092 1.016174698680809 1.088435600998749 0.9534268511273659 0.8637079303528464 1.2246663592186477 1.0 22.75302907304551 -5.269033603202228 24.9979462680708 1.0116887024015822 1.3306640198867619 0.6759286295051693 0.09968438234142588 314.2585330627086 1034446.1560582517 0.027572267642801695 0.04178627570186701 5.382281359161812e-06 5.269033603202228 0.3189753174851797 VKT(ph)EDEKEKDPEEK ddPTM_KYSE-520_SHP099_60min_R1 3 VKTEDEKEKDPEEK 14 3 Q13547 Q13547 HDAC1 Histone deacetylase 1 1 VKT(1)EDEKEKDPEEK;VKT(1)EDEKEKDPEEK;VKT(1)EDEKEKDPEEK 109.72 0.00011491 1886590000.0 727990.0 670810.0 652000.0 686060.0 713990.0 689470.0 604950.0 668000.0 921740.0 647880.0 True False 687606.9434879137 638583.2806936627 694028.9632368846 751262.9361285388 770176.9509526091 685166.7619840886 666104.2497430446 665682.8639123719 754375.2511745148 642140.2872430129 1.0708048648374155 0.9944607017811918 1.0808058254943826 1.1699358396496766 1.1993904856200708 1.0670047894453205 1.0373188896197736 1.0366626687922627 1.1747826233008605 1.0 19.29252898923004 -4.964416284354652 10.07380482598928 1.1017777004888776 1.0337111281235538 0.1332704099187908 0.06510228713254793 0.812539941204016 220.7990301093836 0.017795988011873733 0.03700936757127043 1.0853847508353401e-05 4.964416284354652 -0.06806657236532376 VKT(ph)PEMIIQKPK ddPTM_KYSE-520_SHP099_60min_R1 4 VKTPEMIIQKPK 12 2 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VKT(1)PEMIIQKPK;VKT(1)PEMIIQKPK;VKT(1)PEMIIQKPK;VKT(1)PEMIIQKPK 125.52 7.5445e-05 38540310000.0 12098000.0 11599600.0 10355500.0 8905100.0 9493000.0 10241300.0 9588600.0 11089400.0 13204500.0 10495800.0 True False 11426899.823234916 11042337.804645425 11023032.099385826 9751438.026584068 10240045.092218531 10177380.247882662 10557909.263717921 11050933.45968543 10806895.658356894 10402815.377608828 1.0984430087868657 1.0614758989583832 1.059620083531614 0.9373845130014713 0.9843532467431224 0.9783294116502927 1.0149088377020437 1.0623021805685047 1.0388433578873095 1.0 23.31047069081245 -5.024705016199417 22.701433465323966 1.0032793238573483 1.0751066504273137 0.49594022176697916 0.0330873107212073 211.74131247935853 194570.3471777016 0.010048073887332615 0.01754822836303283 9.447023241387731e-06 5.024705016199417 0.07182732656996538 VKT(ph)PTSQSYR ddPTM_KYSE-520_SHP099_60min_R1 2 VKTPTSQSYR 10 1 Q9Y2X9-2;Q9Y2X9 Q9Y2X9-2 ZNF281 Zinc finger protein 281 1 VKT(0.955)PT(0.044)S(0.001)QSYR;VKT(0.835)PT(0.154)S(0.011)QSYR 98.902 0.007459 1715330000.0 1877950.0 1809980.0 1479900.0 1288630.0 1410900.0 1590500.0 1469560.0 1685420.0 1910900.0 1576340.0 True False 1773776.3698994876 1723025.8439646328 1575296.72192372 1411101.0077592633 1521929.8030771238 1580573.0995339814 1618117.4663234802 1679573.6713999833 1563928.72986892 1562374.8539739614 1.1353078074623502 1.1028248691932345 1.0082706579134266 0.9031769835325196 0.9741130940542444 1.011647810071784 1.03567812948841 1.0750132512232402 1.0009945602305403 1.0 20.575309204038497 -4.717220127617191 4.033476076488894 1.000442352270668 1.1264665107098635 0.5689400977601772 0.04148695201767057 0.16827334414448594 5.665493797280795 0.012409176871127515 0.03472199170691806 1.917696485722243e-05 4.717220127617191 0.12602415843919546 VKT(ph)TPLR ddPTM_KYSE-520_SHP099_60min_R1 1 VKTTPLR 7 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1 P46100-2 ATRX Transcriptional regulator ATRX 1 VKT(0.5)T(0.5)PLR 76.1 0.055292999999999995 1078900000.0 679430.0 649750.0 535900.0 478950.0 527810.0 630430.0 494020.0 545840.0 625200.0 607490.0 True False 641740.6634898743 618535.0347053672 570444.9714703172 524469.2639984319 569345.6441719019 626495.2525238652 543960.3627705745 543946.6084400135 511679.4400094454 602108.1112200688 1.0658229834995863 1.0272823487662575 0.9474128662947396 0.871054972064211 0.9455870691032888 1.0405029277124005 0.9034263990703134 0.9034035554475408 0.8498132320001716 1.0 19.19966302706552 -4.712662666752309 3.113830108816083 0.9291538218585124 1.0582009759946538 0.4281449012768347 0.05369608828241893 0.23827881533818482 4.572065519750658 0.014920731735694987 0.046304335385598236 1.937926641747725e-05 4.712662666752309 0.12904715413614143 VKTPTS(ph)QSYR ddPTM_KYSE-520_SHP099_60min_R1 1 VKTPTSQSYR 10 1 Q9Y2X9-2;Q9Y2X9 Q9Y2X9-2 ZNF281 Zinc finger protein 281 1 VKT(0.141)PT(0.009)S(0.805)QS(0.045)YR 64.22399999999999 0.049075 929780000.0 506150.0 484520.0 455910.0 367230.0 405170.0 387610.0 404170.0 512680.0 552400.0 471890.0 True False 478072.8505149904 461242.9319206532 485298.6880817913 402131.42878827464 437054.5738980496 385190.78221337125 445027.44791907887 510901.63274041173 452098.08487078955 467709.4217248651 1.022157836273441 0.9861741296971009 1.037607252580157 0.859789027352185 0.9344574934715586 0.8235685755331302 0.9515041332241343 1.0923483877153002 0.9666217182529646 1.0 18.835252965709874 -9.508232606517808 7.7203893776330075 0.9999982205610246 0.9620039606433325 0.01963861393356392 0.07576994100705355 0.0 0.0 0.07866793219446334 0.019079776105100033 3.1028972427112317e-10 9.508232606517808 -0.03799425991769212 VKTT(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 1 VKTTPLR 7 1 P46100-2;P46100-5;P46100-3;P46100-4;P46100;A0A096LNL9;P46100-6;A0A096LNW1 P46100-2 ATRX Transcriptional regulator ATRX 1 VKT(0.089)T(0.911)PLR 77.67699999999999 0.049638999999999996 939680000.0 458130.0 384630.0 304050.0 203980.0 274220.0 351640.0 335510.0 311660.0 404650.0 318230.0 True False 432716.61564048636 366151.7974585997 323649.5494972005 223366.19787117685 295799.55390162946 349445.2843257652 369426.6250620532 310578.92420199077 331175.7603963885 315410.7297791938 1.3719146965717166 1.160872991590767 1.0261209240528195 0.7081756477579136 0.9378233711602223 1.107905506481652 1.1712557316001067 0.9846809093001192 1.0499825438032215 1.0 18.266872213626524 -4.46431161406918 2.4242181123416047 0.9955429765722063 1.3849278163048508 0.5069412222466105 0.11553116553092975 0.3397501213074679 3.2495506443227176 0.034446279842847004 0.2278538568709357 3.4331152733513174e-05 4.46431161406918 0.3893848397326446 VKVDGPR ddPTM_KYSE-520_SHP099_60min_R1 1 VKVDGPR 7 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 0 86.01100000000001 0.056389999999999996 0.0 981040.0 884330.0 682050.0 638730.0 941170.0 922520.0 720260.0 822620.0 850960.0 787640.0 False True 926619.7555452461 841845.4593936079 726016.0343185854 699434.7071588226 1015234.7244752259 916762.2104885809 793070.9098601959 819766.5232209513 696447.1149559139 780662.1223746478 1.1869664596081835 1.0783736462489693 0.9300003337041154 0.89595061309143 1.3004790361636174 1.1743393002083138 1.015895208861681 1.050091325972566 0.892123615319563 1.0 19.57433874643193 -7.4854632649387245 2.382572115834136 0.9503658117560466 1.082759070203806 0.16782834411237546 0.11697444365757902 0.6274818375859099 6.641986078386987 0.10142486228089462 0.03497001944022713 3.2699170445555287e-08 7.4854632649387245 0.1323932584477593 VKVDGPRS(ph)PS(ph)YGR ddPTM_KYSE-520_SHP099_60min_R1 7 VKVDGPRSPSYGR 13 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 VKVDGPRS(0.957)PS(0.994)Y(0.048)GR;VKVDGPRS(1)PS(1)YGR;VKVDGPRS(0.967)PS(0.752)Y(0.281)GR;VKVDGPRS(0.972)PS(0.902)Y(0.126)GR;VKVDGPRS(1)PS(0.986)Y(0.014)GR;VKVDGPRS(0.997)PS(0.967)Y(0.036)GR;VKVDGPRS(0.994)PS(0.97)Y(0.036)GR 137.39 0.00045733 163575840000.0 47948800.0 46074200.0 47116000.0 39717500.0 39699200.0 40321600.0 34913690.0 35396110.0 56858000.0 36632440.0 True False 45288984.48043698 43860726.273215905 50153172.748265415 43492239.258498214 42823301.18245049 40069937.937861905 38443106.509978086 35273329.155924164 46534020.47353972 36307905.08120708 1.2473587880970443 1.2080213985113162 1.3813292900290361 1.1978724512257728 1.179448417270865 1.1036147045179439 1.0588081692952365 0.971505491077798 1.2816498327144095 1.0 25.11378035512784 -5.965914592426691 1.6868666522051166 1.0770774612053533 1.2702469863749997 0.4722098729036084 0.08897583705197339 0.31781584367076715 1.843623772681107 0.03324106940298219 0.03775184457923975 1.0816466450710682e-06 5.965914592426691 0.19316952516964636 VKVDGPRS(ph)PS(ph)YGRS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 VKVDGPRSPSYGRSR 15 3 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 3 VKVDGPRS(0.896)PS(0.802)Y(0.357)GRS(0.945)R 60.332 0.022088999999999998 2772400000.0 1546800.0 1814200.0 1935800.0 1127700.0 1334100.0 1326700.0 949260.0 1037300.0 2501500.0 1133500.0 True False 1460995.9205306456 1727043.1088302827 2060584.765389514 1234876.2689446334 1439086.0800093496 1318419.5731856236 1045220.4646848225 1033701.8484076394 2047290.6576833443 1123458.071849656 1.3004454346260284 1.5372563979952425 1.8341447865490672 1.0991743260267284 1.2809432911368424 1.1735369625454593 0.9303600115347219 0.9201071889632317 1.8223115832998509 1.0 20.099514852575137 -5.283073208366651 24.52251206459286 1.1660102887111745 1.555279661279101 0.2939060827848926 0.27111891433851243 749.3174379235463 849369.1670027222 0.07591886145146111 0.11272988714111187 5.2110686150223356e-06 5.283073208366651 0.3892693725679264 VKVDGPRS(ph)PSY(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 1 VKVDGPRSPSYGR 13 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 VKVDGPRS(0.994)PS(0.312)Y(0.693)GR 65.467 0.065331 35643000000.0 4823100.0 4356200.0 4566900.0 3674900.0 3534500.0 3602800.0 3255400.0 3053500.0 4995700.0 3261100.0 True False 4555553.028388522 4146921.613210493 4861289.6812983565 4024161.391101028 3812645.04144595 3580313.5888091973 3584487.6016423004 3042908.1211922592 4088606.8113486725 3232209.191097409 1.4094239447545804 1.2829991402266008 1.5040145590477196 1.2450188565099443 1.179578677007434 1.1076985978106197 1.1089899785927175 0.9414329151632423 1.2649573618595202 1.0 21.624089142782783 -5.741562008519854 1.7226940923432876 1.0822788622401702 1.3881844117654196 0.6630997981672582 0.09595562609377814 0.20938485985416053 1.2850113850667229 0.03241620492476445 0.04389500715513076 1.813167773486701e-06 5.741562008519854 0.3059055495252494 VKVDGPRS(ph)PSY(ph)GRS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 VKVDGPRSPSYGRSR 15 3 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 3 VKVDGPRS(0.968)PS(0.49)Y(0.546)GRS(0.996)R;VKVDGPRS(0.846)PS(0.343)Y(0.813)GRS(0.998)R 77.51 0.033808 7797600000.0 7581300.0 8106400.0 9297500.0 5128700.0 6183000.0 5960700.0 4263610.0 4681200.0 11348000.0 5103500.0 True False 7160750.176053131 7716956.37604554 9896831.726525974 5616130.106000121 6669566.92354232 5923497.0602906 4694617.3076236835 4664962.009800298 9287489.259800352 5058286.960462919 1.4156472798051378 1.525606679961729 1.9565579817599443 1.1102830167401474 1.3185426164378664 1.1710480458286414 0.928104187112794 0.9222414715224805 1.8360937867689477 1.0 22.270217453832917 -5.285879446918351 24.859470997288366 1.1749531225766972 1.6219042959417618 0.35084873444695275 0.27948827130759984 771.453690762101 784690.476749276 0.07830279436462793 0.11620303903074852 5.177505311283456e-06 5.285879446918351 0.4469511733650646 VKVDGPRS(ph)PSYGR ddPTM_KYSE-520_SHP099_60min_R1 3 VKVDGPRSPSYGR 13 2 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 1 VKVDGPRS(0.993)PS(0.007)YGR;VKVDGPRS(0.5)PS(0.5)Y(0.001)GR;VKVDGPRS(0.992)PS(0.008)YGR 91.65700000000001 0.0015764000000000002 10040400000.0 4865560.0 6100580.0 7410610.0 2564420.0 3340820.0 3210300.0 2703250.0 2098760.0 7580100.0 2834960.0 True False 4595657.687546608 5807498.979642732 7888309.777995238 2808141.7057790128 3603723.5273344056 3190263.3268996775 2976520.8911775947 2091479.891414267 6203744.918770944 2809844.4599655075 1.6355559010561824 2.0668400199326418 2.807383074183427 0.9993940041127701 1.282534880019175 1.1353878737255227 1.0593187393775287 0.7443400946968933 2.2078606154758824 1.0 21.422058841034755 -5.279282380619434 24.996402088618634 1.1878370541609693 2.159617741162542 0.48969556956587035 0.4515546021307673 640.4507605062772 897211.1473716609 0.12442165024114878 0.1849852130852226 5.256753582883434e-06 5.279282380619434 0.9717806870015726 VKVDPSHDASK ddPTM_KYSE-520_SHP099_60min_R1 2 VKVDPSHDASK 11 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 ; 112.13 0.00028888 943940000.0 2180810.0 2087920.0 1625890.0 1739660.0 2056630.0 2038100.0 1470420.0 1950470.0 2055180.0 1742220.0 False True 2059836.1219630467 1987613.1891681866 1730697.47091598 1904996.763352149 2218475.080376001 2025379.4619051903 1619064.4035162712 1943704.2748131184 1682011.1188717387 1726785.2862266477 1.1928733342778117 1.1510482542456086 1.0022655883858502 1.1032041902064889 1.2847428676114032 1.1729191104766865 0.9376176739693173 1.1256201279433413 0.974070796345069 1.0 20.719657274221188 -6.744688893704039 24.995812473096493 1.0197954801240474 1.1482918798048447 0.42372533226349596 0.08062985568509734 275.6225796228799 411296.110347505 0.0326929302717639 0.02525590937162234 1.8001599956657077e-07 6.744688893704039 0.1284963996807973 VKVEPAVDTSR ddPTM_KYSE-520_SHP099_60min_R1 2 VKVEPAVDTSR 11 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 ; 120.84 0.00024503 1052690000.0 1498150.0 1354150.0 1130380.0 919630.0 1357300.0 1507870.0 1045060.0 1352160.0 1254350.0 1126140.0 False True 1415044.6330120175 1289094.601379411 1203246.1034719485 1007031.3587031575 1464111.788019404 1498458.8240140248 1150704.8636027225 1347469.6725565172 1026591.6595902878 1116163.2757236613 1.2677756595195064 1.1549337175097705 1.0780197930198225 0.9022258486781439 1.3117362126702756 1.3425086245043345 1.0309467159781496 1.2072334772731965 0.9197504360862437 1.0 20.090116653701834 -7.763244244224429 24.99995636362028 0.9598751475413649 1.1568837081361365 0.28491716568198655 0.1278366682748947 67.15975496247961 930129.8802346385 0.10897048878532183 0.03371277222735445 1.7248675655284236e-08 7.763244244224429 0.19700856059477156 VKVEPSHDASK ddPTM_KYSE-520_SHP099_60min_R1 3 VKVEPSHDASK 11 1 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ;; 167.44 1.4989000000000002e-05 4334830000.0 7836600.0 7270500.0 5228900.0 6978270.0 7253900.0 7108700.0 5651700.0 6903600.0 7277300.0 5694500.0 False True 7401888.176125203 6921214.266757008 5565963.260535805 7641482.682706611 7824740.660954811 7064331.966461628 6223028.991276577 6879653.022912346 5955925.765804118 5644051.160253958 1.3114495184328114 1.226284820998253 0.9861645655751569 1.3539003219033148 1.386369548890257 1.2516420857786419 1.1025819601175564 1.218921095428694 1.05525722511986 1.0 22.428299634564482 -7.740921725230897 1.0466077817391228 0.9986519170692724 1.2422639754985876 0.3577284320066605 0.11034224529008843 0.6042604906809204 1.3704573992746882 0.11078624559723971 0.037918606375948634 1.8158429104874488e-08 7.740921725230897 0.24361205842931521 VLAAVYK ddPTM_KYSE-520_SHP099_60min_R1 4 VLAAVYK 7 0 P04075;P04075-2;H3BQN4;J3KPS3;H3BPS8;P09972;A0A087WXX2;A0A3B3IS80;P05062 P04075 ALDOA;ALDOC;ALDOB Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C;Fructose-bisphosphate aldolase B 0 ;;; 142.42 0.012044 1752465000.0 9301470.0 11742420.0 7789730.0 6240980.0 9644680.0 10385680.0 7595670.0 10030860.0 8698870.0 9690520.0 False True 8785498.91707926 11178296.51746824 8291868.459808669 6834120.862780939 10403661.445277382 10320859.118747605 8363514.45019549 9996065.287880315 7119374.488667566 9604669.531910485 0.9147112129043464 1.1638397844225195 0.8633163725477305 0.711541489280324 1.0831878609370507 1.0745668119509637 0.8707758681762668 1.0407505697795703 0.7412409625353801 1.0 23.19530454522686 -7.739148500459673 24.997456427931333 0.8706200316646163 0.9645099158616135 0.06996815066016959 0.13810117039724093 605.4295185925974 678945.494192274 0.09422343861643889 0.03555350735803022 1.8232721552557843e-08 7.739148500459673 0.09388988419699718 VLAGDKNFITAEELR ddPTM_KYSE-520_SHP099_60min_R1 2 VLAGDKNFITAEELR 15 1 O43707;O43707-2;F5GXS2;O43707-3;H7C144 O43707 ACTN4 Alpha-actinin-4 0 ; 151.44 5.0615e-06 2173600000.0 1892980.0 1711270.0 1285520.0 1231410.0 1812890.0 1558830.0 1101010.0 1221830.0 1635560.0 1320380.0 False True 1787972.6258379233 1629058.0205313629 1368386.6761047253 1348442.8361630829 1955554.1290668985 1549100.7637513713 1212310.8356221006 1217591.7569072668 1338583.533112362 1308682.460440096 1.3662387018136142 1.2448077129294817 1.0456216213401006 1.0303819886984775 1.494292304039336 1.183710189888558 0.9263598101669471 0.9303951063100545 1.0228482260411824 1.0 20.31968365261019 -6.702357821049761 5.811488046838347 0.9642497721367047 1.225544455676764 0.4835615943254321 0.13074707776639394 0.18760076874356468 12.6656075325225 0.05424026543531691 0.04118803463830639 1.9844592210398223e-07 6.702357821049761 0.26129468354005936 VLAGETLS(ph)VNDPPDVLDR ddPTM_KYSE-520_SHP099_60min_R1 2 VLAGETLSVNDPPDVLDR 18 0 Q12906;Q12906-5;Q12906-2;Q12906-3;K7EKJ9;K7EQR9;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 VLAGET(0.006)LS(0.994)VNDPPDVLDR;VLAGETLS(1)VNDPPDVLDR 223.18 3.2015e-15 154690000.0 270659.0 325600.0 265640.0 180193.0 214885.0 306440.0 203354.0 272399.0 317740.0 314168.0 True False 255645.00572466012 309957.68726443633 282763.579439028 197318.48854299894 231795.22697159776 304527.3942918535 223911.00686378573 271454.1114474047 260046.4255735782 311384.71593900543 0.8209940714454858 0.9954171524756256 0.90808432451905 0.6336807121311954 0.7444014272588838 0.9779779761300321 0.7190815586068965 0.8717644044564398 0.8351290614550154 1.0 18.248338607099903 -9.513974718544453 13.71798579246068 1.0000081046034694 0.8344117535591759 0.1769929939285021 0.10734676496065626 0.0 0.0 0.10770816438775344 0.026123066971299888 3.062141684045798e-10 9.513974718544453 -0.1655963510442936 VLAPILPDNFS(ph)TPTGSR ddPTM_KYSE-520_SHP099_60min_R1 2 VLAPILPDNFSTPTGSR 17 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 VLAPILPDNFS(0.845)T(0.154)PTGSR;VLAPILPDNFS(0.483)T(0.483)PT(0.017)GS(0.017)R 288.0 1.6075e-37 946120000.0 490310.0 602060.0 518580.0 436260.0 371870.0 573700.0 390640.0 525650.0 633560.0 581620.0 True False 463111.526891247 573136.1338895162 552008.4965573365 477722.01923364855 401134.053349132 570119.32549679 430129.7034790035 523826.6428376319 518521.4747478955 576467.2992935132 0.8033613137446152 0.9942214147999732 0.9575712225721181 0.8287061899592892 0.6958487564528638 0.9889881458939598 0.7461476201792313 0.9086840545501977 0.8994811594402095 1.0 19.136879246259838 -9.758586398390664 8.074845542492946 0.9999999979843417 0.8702704901019671 0.1439973979182667 0.09562523385124509 7.049677858409194e-11 0.0 0.09233493972497439 0.022394512485740918 1.743466478358262e-10 9.758586398390664 -0.12972950788237458 VLAPILPDNFST(ph)PTGSR ddPTM_KYSE-520_SHP099_60min_R1 4 VLAPILPDNFSTPTGSR 17 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 VLAPILPDNFS(0.003)T(0.988)PT(0.009)GSR;VLAPILPDNFS(0.021)T(0.97)PT(0.007)GS(0.002)R;VLAPILPDNFS(0.154)T(0.827)PT(0.01)GS(0.01)R;VLAPILPDNFS(0.012)T(0.982)PT(0.006)GSR 316.79 1.0316999999999998e-46 1772503000.0 848640.0 1112380.0 773790.0 602790.0 670780.0 840870.0 593800.0 776030.0 938640.0 954770.0 True False 801564.2474781013 1058939.5950835783 823669.7415077754 660078.9803645774 723566.5697838775 835621.8184251098 653827.0989295315 773338.1330567633 768206.6371888459 946311.4805998205 0.8470406033434457 1.119018015518916 0.87040024177419 0.6975282387424758 0.7646177655218175 0.8830304139345854 0.690921659869436 0.817213094114194 0.8117904653359138 1.0 19.85195560256041 -4.992086843444614 24.815932792989013 0.7968852389138543 0.9859493408316818 0.2992203296088759 0.10414229580986827 169.285922444792 530874.9524361058 0.025265230507076016 0.05244041420390068 1.0183877263801994e-05 4.992086843444614 0.18906410191782752 VLAPILPDNFSTPT(ph)GSR ddPTM_KYSE-520_SHP099_60min_R1 1 VLAPILPDNFSTPTGSR 17 0 Q9NQS7;Q9NQS7-2 Q9NQS7 INCENP Inner centromere protein 1 VLAPILPDNFS(0.12)T(0.411)PT(0.464)GS(0.005)R 234.36 1.8078e-19 58054000.0 124990.0 173480.0 142410.0 86124.0 131160.0 140230.0 96997.0 128960.0 169140.0 153810.0 True False 118056.55553861235 165145.76040121133 151589.9764640564 94309.19906587525 141481.5458016835 139354.7725543226 106802.40335949446 128512.66785949023 138428.43967242088 152447.36306236926 0.7744086428724455 1.0832969300600293 0.994375851565487 0.618634505519728 0.9280681735623106 0.9141173041957426 0.7005854428311723 0.8429969877990814 0.9080408928804301 1.0 17.217951670178078 VLATVTKPVGGDK ddPTM_KYSE-520_SHP099_60min_R1 1 VLATVTKPVGGDK 13 1 Q02878;F8VZ45;U3KQR5;F8VZA3;F8VWR1;F8VU16 Q02878 RPL6 60S ribosomal protein L6 0 132.09 0.0015588 0.0 1223800.0 1365900.0 989580.0 801030.0 1101000.0 1324800.0 925550.0 1227600.0 1173600.0 1111400.0 False True 1155913.3744151827 1300280.1137422998 1053369.9101839815 877159.6503615488 1187642.436166924 1316531.431790393 1019113.6264975207 1223341.7421239933 960503.8240484409 1101553.860656117 1.0493480307233343 1.1804053893177913 0.9562581983567868 0.7962930199700696 1.0781519438909053 1.1951584745989898 0.9251600515389301 1.1105600786468453 0.8719535724529505 1.0 20.07110860689748 -4.768943328119237 24.99930539723446 0.996640338984375 1.114876717913611 0.15624293102929343 0.11404236739394916 298.4344242820066 994241.7437160944 0.030632847613883567 0.06583856524875824 1.7023806406628874e-05 4.768943328119237 0.118236378929236 VLAVNQENEHLMEDYEK ddPTM_KYSE-520_SHP099_60min_R1 9 VLAVNQENEHLMEDYEK 17 0 O43707;O43707-2;K7EJH8 O43707 ACTN4 Alpha-actinin-4 0 ;;;;;;;; 314.41 4.3458999999999997e-47 6291670000.0 10126400.0 8884970.0 5886890.0 6746560.0 8889140.0 9446340.0 7591610.0 8298910.0 7387460.0 7550190.0 False True 9564668.40552207 8458122.704588132 6266368.348757036 7387751.033972781 9588664.745711947 9387381.888118096 8359044.025773696 8270123.018190146 6046083.486711735 7483301.190558933 1.2781348982169831 1.1302662406878734 0.837380213516302 0.9872315500668744 1.2813415498776366 1.2544439478076046 1.1170262712824677 1.1051436802548964 0.8079433571830014 1.0 22.835243411710145 -7.7010987246872284 8.747758329975747 0.9047226662923462 1.119780641216364 0.2941989300728788 0.1361516094420853 0.36169092331021496 47.95146684865926 0.101410847815927 0.03786253720671954 1.990220866586524e-08 7.7010987246872284 0.2150579749240178 VLAVSLINEALDKGS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 2 VLAVSLINEALDKGSPEK 18 1 F2Z2E2;Q86VI3 F2Z2E2 IQGAP3 Ras GTPase-activating-like protein IQGAP3 1 VLAVSLINEALDKGS(1)PEK;VLAVSLINEALDKGS(1)PEK 223.89 1.0151e-18 365990000.0 368970.0 363850.0 293930.0 298640.0 323870.0 388390.0 308340.0 361960.0 440570.0 310550.0 True False 348502.4985765399 346370.09985001525 312877.1981046279 327022.65581061004 349356.7264317725 385965.9139440449 339510.01630840654 360704.44524209894 360573.5938659015 307798.76860424434 1.1322413671661917 1.1253134683438726 1.0164991871910742 1.0624560237636396 1.135016647454369 1.2539553543188628 1.1030259082840428 1.1718839775667804 1.1714588576847524 1.0 18.231627934393696 -5.887915574230713 5.842186310228151 1.1532016879930433 1.0827099800627509 0.12198817225650571 0.06777739059715641 0.35171698687016867 16.74135706568505 0.020704359232003547 0.023604584997001743 1.294447454364813e-06 5.887915574230713 -0.07049170793029247 VLDDVSIRS(ph)PETK ddPTM_KYSE-520_SHP099_60min_R1 4 VLDDVSIRSPETK 13 1 E7ETD6;E9PE19;A0A2R8Y7Q1;Q12830-4;Q12830;F5GXF5;Q12830-2 E7ETD6 BPTF Nucleosome-remodeling factor subunit BPTF 1 VLDDVSIRS(1)PETK;VLDDVSIRS(1)PETK;VLDDVSIRS(1)PETK;VLDDVSIRS(1)PETK 197.14 9.694e-09 4044110000.0 6057530.0 5801330.0 5190070.0 5019050.0 5138920.0 4985190.0 5317070.0 5562490.0 6651400.0 5457830.0 True False 5721506.735513318 5522625.398826134 5524630.2166056065 5496059.002967593 5543323.767544893 4954075.580047669 5854571.3252025 5543195.02048493 5443673.428149116 5409477.872327481 1.057681881791594 1.020916533752262 1.021287145819968 1.0160054505598448 1.0247428491947639 0.915814002196136 1.0822802982801578 1.0247190489199498 1.006321415232432 1.0 22.367057919872405 -3.0222870428383133 0.9825569770579157 1.0109531005348216 1.4843240676210299 0.11833951720599367 0.038385766610555434 44.395368362342865 4.998403176528997 0.01226525978690858 38.404608786182116 0.0009499767079776147 3.0222870428383133 0.4733709670862083 VLDEEGS(ph)ER ddPTM_KYSE-520_SHP099_60min_R1 6 VLDEEGSER 9 0 O43719 O43719 HTATSF1 HIV Tat-specific factor 1 1 VLDEEGS(1)ER;VLDEEGS(1)ER;VLDEEGS(1)ER;VLDEEGS(1)ER;VLDEEGS(1)ER;VLDEEGS(1)ER 225.93 3.9782e-05 3898100000.0 7561440.0 5803580.0 5119610.0 5973750.0 6108010.0 6252000.0 6872200.0 6927910.0 6275840.0 6223680.0 True False 7141991.84984306 5524767.305448822 5449628.252265631 6541493.403926563 6588675.637177058 6212978.948938349 7566909.042208698 6903878.697196348 5136305.657051944 6168543.037149764 1.1578085468206585 0.8956356909850782 0.8834546860491203 1.0604600412983622 1.068108886895506 1.0072036316389417 1.2266930775447848 1.1192073485777856 0.8326610718477252 1.0 22.556498345361444 -5.3336572528928885 24.994708569309964 1.0568424185168794 0.9706323525857004 0.05464718287274328 0.11708560178715316 344.7357334188593 119312.05703755544 0.03331034750013754 0.049407198591233985 4.638128184404489e-06 5.3336572528928885 -0.08621006593117908 VLDFEHFLPMLQTVAK ddPTM_KYSE-520_SHP099_60min_R1 1 VLDFEHFLPMLQTVAK 16 0 G8JLA2;P60660-2;F8W1R7;J3KND3;G3V1V0;B7Z6Z4;P60660;F8VZU9;G3V1Y7;F8VPF3;F8W180 G8JLA2 MYL6 Myosin light polypeptide 6 0 122.93 0.00027908 54105000.0 51370.0 58849.0 46453.0 42135.0 69194.0 55143.0 42666.0 40738.0 47527.0 26011.0 False True 48520.403696443806 56021.80570585013 49447.43470742791 46139.49773165033 74639.17413999457 54798.83208274276 46979.09566003265 40596.689386320664 38897.29485817165 25780.56277625179 1.8820537052487936 2.1730249332437217 1.9180122302441458 1.7897009515305276 2.895172412944753 2.1255871160897097 1.8222680423139659 1.5747014422709578 1.5087837762022231 1.0 14.653996136873749 -7.612945278766436 1.0988561808391697 1.0649317021370126 2.1319854050237446 0.596303686211531 0.2976000102331201 0.34797594927828157 0.802212277808774 0.29142043877066565 0.10067293620378691 2.4381180026073523e-08 7.612945278766436 1.067053702886732 VLDLDLFR ddPTM_KYSE-520_SHP099_60min_R1 2 VLDLDLFR 8 0 Q5T5C7;P49591 Q5T5C7 SARS Serine--tRNA ligase, cytoplasmic 0 ; 126.28 0.0065098 127648000.0 209848.0 252780.0 179424.0 154161.0 217330.0 252620.0 181083.0 172974.0 198311.0 193314.0 False True 198207.313118383 240636.06936948458 190989.95812855035 168812.4150898053 234432.63456145127 251043.30487536863 199388.63683977164 172373.99356643495 162302.72141348888 191601.38835601602 1.0344774368236438 1.2559202802975356 0.9968088423956012 0.8810605003348599 1.223543506510768 1.3102373997880596 1.0406429648061113 0.8996489798192145 0.8470853097990759 1.0 17.547748489410083 -7.128987475187154 4.2798708383282404 0.9065886841440789 1.115975698022339 0.33507595284088776 0.12585396935899523 0.28088873413170534 8.39037452018213 0.06683463154024082 0.03728613069390576 7.430405664670026e-08 7.128987475187154 0.2093870138782601 VLDQNIPPS(ph)FT(ph)KKLT(ph)KMDK ddPTM_KYSE-520_SHP099_60min_R1 1 VLDQNIPPSFTKKLTKMDK 19 3 A0A0A0MTS7;Q8WZ42-5;Q8WZ42-11;Q8WZ42-4;Q8WZ42-7;Q8WZ42-2;Q8WZ42;Q8WZ42-8;Q8WZ42-13;Q8WZ42-12 A0A0A0MTS7 TTN Titin 3 VLDQNIPPS(1)FT(1)KKLT(1)KMDK 57.578 0.020253 2571900000.0 811810.0 906330.0 627550.0 797240.0 757310.0 1009200.0 881390.0 1135300.0 1118600.0 1022000.0 True False 766777.280996887 862788.5463709346 668002.8771155019 873009.4499010545 816905.9884955259 1002901.2084562689 970489.502737453 1131361.909281012 915490.4376112685 1012945.8751039696 0.7569775442524848 0.851761745199246 0.6594655188728001 0.8618520212755179 0.8064655857467982 0.9900837084245299 0.9580862379619652 1.1169026273638638 0.9037900840627855 1.0 19.950125657771974 -6.201986654245884 1.710351173862747 1.0082418620633233 0.774194264586482 0.668221319917602 0.07251641562792509 0.20728374384688955 1.2013457128102594 0.028454860486469214 0.02709227362159682 6.280776591764697e-07 6.201986654245884 -0.23404759747684134 VLDTSSLT(ph)QSAPAS(ph)PTNK ddPTM_KYSE-520_SHP099_60min_R1 1 VLDTSSLTQSAPASPTNK 18 0 I3L436;Q8N122-3;Q8N122 I3L436 RPTOR Regulatory-associated protein of mTOR 2 VLDT(0.001)S(0.002)S(0.002)LT(0.547)QS(0.448)APAS(0.997)PT(0.003)NK 94.882 0.0024616 565520000.0 1030800.0 985200.0 910580.0 919220.0 878730.0 979950.0 898390.0 908880.0 1172200.0 999780.0 True False 973619.4691511443 937869.5131846518 969277.4437795136 1006582.3924264285 947881.0517102282 973833.7685560043 989208.0286414654 905727.3074141875 959358.0287573136 990922.7270170699 0.9825382369440523 0.946460796199395 0.9781564367761408 1.0158031145945134 0.9565640446693476 0.9827544994224647 0.9982695942591142 0.9140241541746222 0.9681461556999766 1.0 19.9184130336691 -9.018556884772682 9.007358162799772 0.9999999999999873 0.9711818746551456 0.09336611820546847 0.02671585672596374 32773097.56954956 0.0 0.02626673497471918 0.006566683743679798 9.581712048775683e-10 9.018556884772682 -0.02881812534484174 VLDTSSLTQS(ph)APAS(ph)PTNK ddPTM_KYSE-520_SHP099_60min_R1 9 VLDTSSLTQSAPASPTNK 18 0 I3L436;Q8N122-3;Q8N122 I3L436 RPTOR Regulatory-associated protein of mTOR 2 VLDTSSLT(0.025)QS(0.975)APAS(0.999)PT(0.001)NK;VLDTSSLT(0.013)QS(0.987)APAS(1)PTNK;VLDTSSLT(0.033)QS(0.967)APAS(1)PTNK;VLDTSSLT(0.021)QS(0.979)APAS(0.988)PT(0.012)NK;VLDTSSLT(0.002)QS(0.998)APAS(1)PTNK;VLDTSSLT(0.002)QS(0.998)APAS(0.999)PT(0.001)NK;VLDTSSLT(0.002)QS(0.998)APAS(0.998)PT(0.002)NK;VLDTSSLT(0.048)QS(0.952)APAS(1)PTNK;VLDTSSLT(0.001)QS(0.999)APAS(1)PTNK 335.42 5.1651e-59 7595250000.0 10763770.0 9814800.0 10175900.0 9635070.0 10070800.0 10280150.0 9141120.0 10018450.0 12032910.0 9813230.0 True False 10166682.22105647 9343282.275684861 10831854.796015663 10550784.155910568 10863314.664986257 10215987.770621989 10065193.618333984 9983698.3352738 9848036.86897642 9726292.416777408 1.0452782813232524 0.9606211570986832 1.1136674008824998 1.0847693760174175 1.116901918993052 1.0503475870209165 1.0348438219862677 1.0264649578139744 1.0125170462682171 1.0 23.21345853555562 -9.680275547754523 6.442180082807354 0.9999999998786144 1.0507014959419638 0.09896810441009096 0.04466402736537307 7.102615136121453e-11 1.0672671706021168e-10 0.04614088109727661 0.011190807269899081 2.0879709510810762e-10 9.680275547754523 0.050701496063349394 VLDTSSLTQSAPAS(ph)PTNK ddPTM_KYSE-520_SHP099_60min_R1 7 VLDTSSLTQSAPASPTNK 18 0 I3L436;Q8N122-3;Q8N122 I3L436 RPTOR Regulatory-associated protein of mTOR 1 VLDTSSLTQSAPAS(1)PTNK;VLDTSSLTQSAPAS(0.997)PT(0.003)NK;VLDTSSLT(0.001)QS(0.002)APAS(0.997)PTNK;VLDTSSLTQSAPAS(1)PTNK;VLDTSSLTQSAPAS(0.948)PT(0.052)NK;VLDTSSLTQSAPAS(0.995)PT(0.005)NK;VLDTSSLTQSAPAS(1)PTNK 389.16 1.1876999999999996e-86 10475330000.0 5836740.0 7956300.0 5239030.0 4447990.0 4944970.0 7569930.0 5330850.0 7086000.0 8131460.0 7636100.0 True False 5512964.396947276 7574067.405350217 5576746.256544384 4870725.632263043 5334111.005969443 7522683.258947038 5869744.342082341 7061420.319884831 6654991.841425477 7568450.094795905 0.7284139193489577 1.0007422009108806 0.7368412537170558 0.6435565500540424 0.7047824771464369 0.9939529447541265 0.7755543431697329 0.9330074495358422 0.8793070916859813 1.0 22.85156645744932 -6.254315631359455 24.97821174247011 0.9033767056893147 0.7680082901058221 0.34185037846131294 0.10560583448349045 789.0512804436355 2766676.2880754042 0.03684555200599426 0.036102100918309156 5.567809512391925e-07 6.254315631359455 -0.13536841558349266 VLEDSDLK ddPTM_KYSE-520_SHP099_60min_R1 2 VLEDSDLK 8 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ; 122.18 0.0069472 1084800000.0 1318680.0 1621170.0 1378150.0 898690.0 1563370.0 1682040.0 1213580.0 1423460.0 1555370.0 1475460.0 False True 1245530.191676593 1543286.5597742214 1466987.7541179652 984101.227399 1686398.3246414918 1671541.7644389428 1336260.5097994292 1418522.349498063 1272954.0156869655 1462388.572290511 0.8517094671532771 1.0553190779910167 1.0031449793266987 0.6729409994346586 1.1531807322592234 1.1430216264756767 0.9137520185257397 0.9700037160959613 0.8704622285807131 1.0 20.47989527106076 -4.230437987464998 21.760382574573267 0.975047492854143 0.8517082771844179 0.07378515507826489 0.1318299581219811 5947.09028704275 4173957.376948036 0.03354012783320888 3.0008294471719608 5.882501038721424e-05 4.230437987464998 -0.12333921566972517 VLEDSDLKK ddPTM_KYSE-520_SHP099_60min_R1 1 VLEDSDLKK 9 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 85.37700000000001 0.012013 715720000.0 598980.0 658470.0 444990.0 414180.0 657530.0 587080.0 486820.0 610570.0 662000.0 604400.0 False True 565753.3853629726 626836.1128163793 473674.76740917354 453543.5426722425 709273.8701660649 583415.8159537313 536032.5165053469 608452.0751781092 541797.4876619534 599045.4862160853 0.9444247530126558 1.0463915132318842 0.7907158609960905 0.7571103582418817 1.1840067014714448 0.9739090425986181 0.8948110433002935 1.0157026288962485 0.9044346383181301 1.0 19.19230602711182 -5.736775333648789 24.99998743459131 0.9901509619433475 0.8895026123407068 0.2098979603286184 0.10485607140131595 440.6451529325817 446645.02573313925 0.032574115435531244 0.04203374799654136 1.83326254837678e-06 5.736775333648789 -0.10064834960264069 VLES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 VLESPR 6 0 E7EPJ7;O75962-4;O75962;O75962-5 E7EPJ7 TRIO Triple functional domain protein 1 VLES(1)PR;VLES(1)PR 87.181 0.016388 804230000.0 1678990.0 1604720.0 1594330.0 1505700.0 1626490.0 1623870.0 1521650.0 1549880.0 1889440.0 1621370.0 True False 1585853.0777164132 1527626.8424661742 1697103.0628181957 1648801.275294787 1754485.5095378188 1613734.8249860078 1675473.2318728885 1544503.8280247096 1546365.3249063445 1607005.9232067717 0.9868371079503253 0.9506043633104991 1.0560652193687223 1.0260082128413148 1.0917728952963361 1.0041872289840779 1.0426055110795676 0.9611064935856991 0.96226485700848 1.0 20.615943815926034 -9.287103025033893 6.6043579937617825 1.0000008470856416 1.011079576301571 0.0019329368699030347 0.043502307396078625 28730398.290967543 3.975953411809189 0.04472156831938432 0.011180392079846028 5.162938774927492e-10 9.287103025033893 0.01107872921592934 VLES(ph)PRK ddPTM_KYSE-520_SHP099_60min_R1 6 VLESPRK 7 1 E7EPJ7;O75962-4;O75962;O75962-5 E7EPJ7 TRIO Triple functional domain protein 1 VLES(1)PRK;VLES(1)PRK;VLES(1)PRK;VLES(1)PRK;VLES(1)PRK;VLES(1)PRK 103.55 0.0028658 2410060000.0 2463510.0 2181130.0 2174160.0 1891040.0 2230300.0 2242960.0 2117980.0 2114130.0 2660520.0 2203730.0 True False 2326854.1894145696 2076345.2408571255 2314309.832378997 2070763.8730380908 2405811.921328872 2228960.8546562316 2332086.087892845 2106796.5764716538 2177436.6342513254 2184206.666675996 1.065308619790846 0.9506175732065602 1.059565410035579 0.9480622436655471 1.1014580067142286 1.0204899054027448 1.0677039510376996 0.9645591731838509 0.9969004616055982 1.0 21.05867793789079 -7.278389637557949 24.9417643471792 0.9855473649620025 1.027685012613848 0.14649761158744878 0.0475237711257418 1642.9230990572423 2417494.9218205432 0.024550967992797268 0.01183981563546824 5.2675705681845876e-08 7.278389637557949 0.04213764765184547 VLFELTGLS(ph)GSK ddPTM_KYSE-520_SHP099_60min_R1 1 VLFELTGLSGSK 12 0 Q9Y6Q5-2 Q9Y6Q5-2 1 VLFELT(0.002)GLS(0.959)GS(0.039)K 80.312 0.0098581 54582000.0 189580.0 180320.0 161110.0 145610.0 157280.0 166800.0 146670.0 176000.0 192950.0 159760.0 True False 179063.6194816396 171657.15653416212 171495.4083851142 159448.73062075704 169657.04119921336 165758.93932868176 161496.8349612571 175389.49707870893 157915.14387367657 158344.65069139926 1.130847292281568 1.0840729748976985 1.0830514806549714 1.0069726380053692 1.07144157038725 1.046823739260585 1.0199071093093077 1.1076439672125626 0.997287519244589 1.0 17.2727086045036 -1.0000166474073526 0.5506722169632065 1.038285011874646 5.342135906913959 0.4444214740747855 0.033654973045519364 128.01184919757145 1.1722154872073927 0.015818656670480942 651.6952653288452 0.09999616686626574 1.0000166474073526 4.303850895039313 VLGDHLLLDPTHELPPYTPPPMLS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 1 VLGDHLLLDPTHELPPYTPPPMLSPVR 27 0 Q05GC8;Q96PN7-2;Q96PN7-3;Q96PN7-4;Q96PN7-5;Q96PN7 Q05GC8 BCAR2;TRERF1 Transcriptional-regulating factor 1 1 VLGDHLLLDPTHELPPYT(0.006)PPPMLS(0.994)PVR 101.37 0.0018156 129040000.0 59217.0 70152.0 51281.0 51136.0 58854.0 67486.0 57205.0 69117.0 89034.0 63750.0 True False 55932.11496383714 66781.79261970118 54586.65531250103 55995.95006540098 63485.474966546855 67064.7948413393 62987.839666998785 68877.24925902915 72867.6699644929 63185.224596749526 0.8852087702591547 1.0569210293372397 0.8639148734672563 0.8862190555271305 1.0047519079296392 1.0613999597112986 0.9968760903991327 1.0900847420992223 1.1532390749504668 1.0 15.94729961369321 -5.991881831132466 3.839623944491497 1.0606949262185428 0.9287106025405447 0.49855720725369124 0.06462282472899405 0.20265396352232765 6.680236139783349 0.02181788413451393 0.02375799075997599 1.0188685782388987e-06 5.991881831132466 -0.13198432367799806 VLGS(ph)EGEEEDEALS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 12 VLGSEGEEEDEALSPAK 17 0 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 2 VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK;VLGS(1)EGEEEDEALS(1)PAK 425.37 4.600699999999999e-102 18401070000.0 20913270.0 19837390.0 18300260.0 18192340.0 18833250.0 18374680.0 18192500.0 18610550.0 22236100.0 18110160.0 True False 19753169.223529827 18884372.00787054 19479924.04105126 19921334.523873534 20315319.628465667 18259996.806378543 20031575.441689987 18545994.345785033 18198584.766465165 17949718.07189127 1.1004723942969727 1.052070674995331 1.08524958236287 1.1098410818535227 1.131790457493528 1.0172859948688087 1.1159827336262649 1.0332192556732973 1.0138646575716201 1.0 24.097457848678886 -7.453226039375387 4.346178487456621 1.0106182688101888 1.085842823250063 0.5326415729227529 0.03134554804158921 0.17727178774603175 6.38448297022835 0.0192341961440314 0.008278821002522863 3.5218751856927744e-08 7.453226039375387 0.07522455443987419 VLGS(ph)EGEEEDEALSPAK ddPTM_KYSE-520_SHP099_60min_R1 10 VLGSEGEEEDEALSPAK 17 0 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK;VLGS(1)EGEEEDEALSPAK 406.55 2.9077999999999996e-101 12853450000.0 8811990.0 8558970.0 7381800.0 6308760.0 6798140.0 8708650.0 7040050.0 8792320.0 10071920.0 8385030.0 True False 8323171.348433438 8147784.233924105 7857642.639297607 6908342.653602139 7333114.941874494 8654296.085040301 7751726.95826685 8761821.494062915 8243113.220441363 8310745.157654618 1.0014951957427518 0.9803915388284505 0.9454799166907819 0.8312543006133698 0.8823655163003432 1.0413381617253965 0.9327354901656582 1.0542762806284385 0.9918621091213509 1.0 22.986546406976434 -6.26415216588589 24.998185419117465 1.0029779929528195 0.9266713980237944 0.33066811697153786 0.05392134021031587 324.59458173921377 2991108.636579716 0.02014598335640076 0.018571729071030364 5.443119061979723e-07 6.26415216588589 -0.07630659492902514 VLGSEGEEEDEALS(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 8 VLGSEGEEEDEALSPAK 17 0 M0R0Q7;P18858-2;P18858-3;P18858;B4E135;F5GZ28;M0QY71;M0R1G7 M0R0Q7 LIG1 DNA ligase;DNA ligase 1 1 VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK;VLGSEGEEEDEALS(1)PAK 423.4 6.9695999999999986e-102 9563550000.0 9052080.0 10520030.0 7073130.0 6054040.0 6615390.0 9183730.0 7191610.0 8532710.0 9905070.0 9015820.0 True False 8549943.077525888 10014631.967913046 7529075.277208145 6629414.141386498 7135983.556579745 9126410.934538322 7918608.122149908 8503112.020559477 8106558.97449513 8935946.84900183 0.9568032601358791 1.1207130186804668 0.8425604364521442 0.7418815547372041 0.7985705014994414 1.021314370906063 0.8861521063136626 0.9515625108613194 0.9071852274278751 1.0 23.09118917402303 -9.223073633384077 14.501039485328473 1.0000003916111457 0.913028925308602 0.058700812701326543 0.10313773476934045 0.0 0.0 0.10818090247587077 0.026237722798979905 5.983101446908616e-10 9.223073633384077 -0.08697146630254371 VLGSGAFGTVY(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 VLGSGAFGTVYK 12 0 P00533;E9PFD7;Q504U8;A0A0A0MSE1;Q15303;Q15303-4;Q15303-3;Q15303-2;P04626-3;P04626-5;H3BLT0;P04626-6;P04626-4;P04626;J3QLU9;B4DTR1;J3KTI5;P04626-2 P00533 EGFR;ERBB4;ERBB2 Epidermal growth factor receptor;Receptor protein-tyrosine kinase;Receptor tyrosine-protein kinase erbB-4;ERBB4 intracellular domain;Receptor tyrosine-protein kinase erbB-2 1 VLGSGAFGTVY(1)K;VLGSGAFGTVY(1)K 218.47 1.2799e-12 324230000.0 869350.0 875110.0 773150.0 858740.0 960210.0 981770.0 858630.0 1031830.0 1251660.0 870230.0 True False 821125.42249374 833068.4020331093 822988.4860837387 940354.3914104053 1035773.0641524451 975642.409260909 945428.6998212603 1028250.8225609321 1024390.0957809065 862520.4392286948 0.9520069150222433 0.9658535196894316 0.954166937562306 1.0902401249196056 1.2008678485099793 1.131152799269746 1.0961232416320543 1.1921466156563676 1.1876705167670727 1.0 19.718199119301346 -5.364056478033911 3.5646669460461946 1.1424363018338013 0.9571218810561148 0.6677169811494097 0.055684589444824434 0.13225370044838763 3.1041562310892443 0.015591157076173756 0.024370954202304968 4.324575882238339e-06 5.364056478033911 -0.18531442077768645 VLHEAEGHIVTCETNTGEVYR ddPTM_KYSE-520_SHP099_60min_R1 3 VLHEAEGHIVTCETNTGEVYR 21 0 H3BT13;P62318-2;P62318 H3BT13 SNRPD3 Small nuclear ribonucleoprotein Sm D3 0 ;; 184.8 5.118199999999999e-13 1973000000.0 443850.0 412840.0 319711.0 415695.0 324654.0 327496.0 370708.0 345109.0 293244.0 337765.0 False True 419228.7557069607 393006.5467145264 340320.0826156866 455202.5278167414 350202.42277142295 325451.9759855267 408182.78240142955 343911.89742804586 239998.2816796701 334772.6648771933 1.2522789334091806 1.1739505280656515 1.016570701017445 1.3597362496239833 1.0460902562038328 0.9721581542654154 1.219283487650241 1.0272998171884946 0.7168992778060602 1.0 18.35282220705592 -7.547009797918284 6.810101807119856 0.859840092942558 1.140814249466361 0.45361900192228943 0.12673292868151168 0.1529543167319434 26.36503175832699 0.08304200764193306 0.03174976221586794 2.8378550041763546e-08 7.547009797918284 0.28097415652380286 VLHS(ph)EKRDK ddPTM_KYSE-520_SHP099_60min_R1 2 VLHSEKRDK 9 2 H0YHL8 H0YHL8 PPP1R12A 1 VLHS(1)EKRDK;VLHS(1)EKRDK 46.592 0.055969000000000005 1363570000.0 1894510.0 1497310.0 1435890.0 892170.0 1485950.0 1786580.0 1629150.0 1770680.0 1886020.0 1879080.0 True False 1789417.753687947 1425376.980091871 1528449.7669052314 976961.5685593081 1602885.811101034 1775429.291521796 1793840.3809717859 1764537.9243598173 1543566.3106951613 1862432.8131021205 0.9607958693057187 0.7653306847175458 0.820673774727692 0.5245620468488489 0.8606408777942557 0.953285014649517 0.9631705199522955 0.9474370897819144 0.828790332642472 1.0 20.828756950897507 -5.9946580456008896 24.99980977485315 0.9334768201587883 0.7615809106913377 0.35678413586700275 0.10780729686229897 164.2585329134155 768705.0288657994 0.033861693311892836 0.038278213017167696 1.0123762644367439e-06 5.9946580456008896 -0.1718959094674506 VLHS(ph)GSRDR ddPTM_KYSE-520_SHP099_60min_R1 1 VLHSGSRDR 9 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 VLHS(0.613)GS(0.387)RDR 49.3 0.05185599999999999 365490000.0 154500.0 237390.0 220270.0 169170.0 199000.0 157880.0 164740.0 186980.0 276310.0 156200.0 True False 145929.5770118859 225985.42807034528 234468.95664446085 185247.86593718504 214660.16784488433 156894.61235738755 181393.52690746242 186331.41002146018 226139.06920826918 154816.1895217612 0.9425989456443367 1.4597015258444945 1.514498951102937 1.1965664993398273 1.3865485806619169 1.0134251000625112 1.1716702721323953 1.2035654061571457 1.460693935865685 1.0 17.24019682008897 -6.228483667893017 24.9803136709384 1.1827061229729423 1.3150283535612286 0.10121923418562606 0.18932580878781485 1575.359035549709 1194117.0833374218 0.062229843957896366 0.06222540184372126 5.909031867012379e-07 6.228483667893017 0.1323222305882863 VLHS(ph)PPAVR ddPTM_KYSE-520_SHP099_60min_R1 8 VLHSPPAVR 9 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR;VLHS(1)PPAVR 111.86 0.00060623 14233500000.0 5924000.0 5491300.0 5401870.0 4835300.0 5182080.0 5315280.0 4642270.0 5205720.0 6182970.0 5025210.0 True False 5595383.910798782 5227489.7053906545 5750083.1834976 5294845.45821405 5589880.213998081 5282105.365916997 5111555.955789148 5187662.572344186 5060298.50798976 4980690.548954224 1.1234152886638624 1.049551192552657 1.1544750927569516 1.0630745689120935 1.122310281888877 1.0605166721361678 1.0262745507974593 1.0415548850818324 1.0159833176249526 1.0 22.247914348261265 -6.549759624250729 2.9792184068256815 1.0240874989820505 1.1003218139534743 0.6207634598106682 0.029939917793844886 0.17675714314776966 3.214929965047371 0.01141865506279172 0.008889006839434868 2.8199432974603627e-07 6.549759624250729 0.07623431497142374 VLISVGS(ph)YK ddPTM_KYSE-520_SHP099_60min_R1 2 VLISVGSYK 9 0 Q8TEV9-2;Q8TEV9 Q8TEV9-2 SMCR8 Smith-Magenis syndrome chromosomal region candidate gene 8 protein 1 VLISVGS(1)YK;VLISVGS(1)YK 158.05 0.00016212 774730000.0 1602220.0 1881000.0 1935440.0 1862150.0 1899080.0 1850190.0 1844650.0 2229700.0 2311800.0 2197210.0 True False 1513341.662653615 1790633.936561439 2060201.5592134928 2039128.1761241865 2048526.7917128827 1838642.2779168678 2031125.2240491079 2221965.6911158934 1892035.3957355036 2177744.428803511 0.6949124252771341 0.8222424600784046 0.9460254068221411 0.9363487051804869 0.940664462100531 0.8442874442007176 0.9326738239734779 1.0203059926259017 0.8688050676244959 1.0 21.054403224512075 -4.455047936491012 2.3414473619539176 0.9340489166593214 0.6807221344296754 0.699696777202431 0.0498692934989948 0.2156836480279447 1.8727187324604673 0.013217429269836623 0.09345089379091556 3.507131608515463e-05 4.455047936491012 -0.253326782229646 VLKEPVNLEGDDTS(ph)LIHGK ddPTM_KYSE-520_SHP099_60min_R1 1 VLKEPVNLEGDDTSLIHGK 19 1 Q9H2J7-3;Q9H2J7 Q9H2J7-3 SLC6A15 Sodium-dependent neutral amino acid transporter B(0)AT2 1 VLKEPVNLEGDDT(0.414)S(0.586)LIHGK 129.32 8.365199999999999e-06 174310000.0 128270.0 152000.0 131430.0 189540.0 189400.0 216550.0 172740.0 225990.0 297030.0 182240.0 True False 121154.60740009452 144697.6918433487 139902.18809543538 207553.8246127212 204304.70246141273 215198.4311248561 190202.24497993826 225206.09343646254 243096.83951696355 180625.4953805746 0.6707503121019764 0.8010922906452012 0.7745428617408857 1.1490837668038452 1.1310955966152312 1.1914067317652859 1.0530199215741145 1.246812322712015 1.3458611643099605 1.0 17.46264201876774 -5.254901680611007 4.100814699812259 1.1683643445677048 0.7461258380950019 0.7976441629663267 0.09489074500681018 0.09059227188619813 3.697433498635032 0.026959292081023496 0.04538991516425587 5.560301219922203e-06 5.254901680611007 -0.4222385064727029 VLLGFSSDES(ph)DVEASPR ddPTM_KYSE-520_SHP099_60min_R1 2 VLLGFSSDESDVEASPR 17 0 Q9Y2U8 Q9Y2U8 LEMD3 Inner nuclear membrane protein Man1 1 VLLGFS(0.201)S(0.188)DES(0.611)DVEASPR;VLLGFSSDES(1)DVEASPR 312.09 2.9348000000000003e-47 112120000.0 112228.0 157090.0 94183.0 108649.0 124798.0 113636.0 108810.0 115091.0 165934.0 100106.0 True False 106002.48911902843 149543.16060310297 100254.18687812799 118974.96829348693 134618.89259651213 112926.75557286604 119809.57668326441 114691.77618344121 135804.56845573802 99219.1387212894 1.0683673582048896 1.507200753104457 1.0104319405527806 1.1991130927642142 1.356783523133194 1.1381549671589257 1.2075248609022338 1.1559440815709465 1.368733595211087 1.0 16.598330813418645 -10.51262757286285 4.244598405306457 0.998088761752401 1.223879874617816 0.18251818803372888 0.14195272993385444 0.0024155963528970656 0.0002773628104759264 0.12931739000699466 0.03110951770811809 3.0716549421639455e-11 10.51262757286285 0.2257911128654151 VLLIESLATMEPDS(ph)RPELQEK ddPTM_KYSE-520_SHP099_60min_R1 9 VLLIESLATMEPDSRPELQEK 21 1 J3KN16;Q5VYK3 J3KN16 KIAA0368;ECM29 Proteasome-associated protein ECM29 homolog 1 VLLIESLATMEPDS(1)RPELQEK;VLLIESLATMEPDS(0.999)RPELQEK;VLLIESLATMEPDS(1)RPELQEK;VLLIESLATMEPDS(1)RPELQEK;VLLIESLATMEPDS(1)RPELQEK;VLLIESLATMEPDS(1)RPELQEK;VLLIESLATMEPDS(1)RPELQEK;VLLIESLATMEPDS(1)RPELQEK;VLLIESLATMEPDS(1)RPELQEK 232.2 1.7088e-21 2969274000.0 1216037.0 1330176.0 925374.0 911813.0 934499.0 1097874.0 885201.0 944537.0 1102521.0 1085397.0 True False 1148581.00350034 1266272.3483251182 985025.0886907501 998471.4333734242 1008038.7547280227 1091021.7611303169 974685.75580923 941260.6216035921 902330.9786926641 1075781.2270060887 1.0676715438666409 1.1770723605664402 0.9156369938078265 0.9281361380065922 0.9370295088095244 1.0141669456034688 0.906025994264458 0.874955425856548 0.8387681026967364 1.0 20.036953287735393 -4.769542332702536 24.99990155741414 0.9251596677419691 1.122371961162245 0.6701499639195154 0.05486179098110796 90.69822915684223 279832.40236694884 0.014734075484106667 0.031541664607234766 1.7000342353240754e-05 4.769542332702536 0.1972122934202758 VLLLEANRHS(ph)PGPER ddPTM_KYSE-520_SHP099_60min_R1 2 VLLLEANRHSPGPER 15 1 Q9UDT6;Q9UDT6-2;H7C4L6 Q9UDT6 CLIP2 CAP-Gly domain-containing linker protein 2 1 VLLLEANRHS(1)PGPER;VLLLEANRHS(1)PGPER 121.44 7.5955e-05 1298360000.0 595900.0 579400.0 488350.0 527630.0 498380.0 544520.0 485180.0 486580.0 629510.0 474920.0 True False 562844.239102801 551564.7543028691 519829.8223876262 577775.7965622558 537599.6706056965 541121.448700562 534226.7293004883 484892.16754862526 515206.8526557035 470712.57828216924 1.1957280622431197 1.1717654886465194 1.1043465723493235 1.2274492401941028 1.142097524921953 1.1495793264657272 1.134931918008457 1.03012366764917 1.094525356717496 1.0 18.84448687937146 -7.338895459013465 0.8065577485111782 1.0114300130361789 1.1721658838351274 0.6888611808568306 0.03727752582865004 0.3436842743972588 0.42027412582301066 0.0333329319423673 0.014464464031277663 4.582521813918361e-08 7.338895459013465 0.16073587079894858 VLLPEY(ph)GGTK ddPTM_KYSE-520_SHP099_60min_R1 2 VLLPEYGGTK 10 0 P61604;B8ZZ54;B8ZZL8 P61604 HSPE1 10 kDa heat shock protein, mitochondrial 1 VLLPEY(0.953)GGT(0.047)K;VLLPEY(1)GGTK 141.52 0.00054942 278100000.0 1276750.0 1362290.0 1125330.0 1191380.0 1181030.0 1225770.0 1196130.0 1197510.0 1655760.0 1205590.0 True False 1205926.1323619743 1296843.5435610232 1197870.5723916613 1304608.3969985412 1273970.3418585134 1218119.514753704 1317046.4935038425 1193356.117310936 1355115.7223129247 1194909.410534826 1.009219713000852 1.085306996603678 1.0024781475739737 1.091805274522539 1.0661647909261176 1.019424153843168 1.1022145125749319 0.9987000744908396 1.1340740229892343 1.0 20.18846981688071 -5.26573711588964 24.98325310299936 1.0593188321496334 1.0376321583576358 0.06070276311476952 0.046509697525188756 1294.131010917613 7522927.428761379 0.011979313776952254 0.018484464101702788 5.423290699205108e-06 5.26573711588964 -0.021686673791997624 VLLS(ph)PSIPSVGQDQTLS(ph)PGSK ddPTM_KYSE-520_SHP099_60min_R1 1 VLLSPSIPSVGQDQTLSPGSK 21 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 2 VLLS(0.496)PS(0.503)IPS(0.001)VGQDQT(0.035)LS(0.958)PGS(0.006)K 94.85600000000001 0.0011368 128930000.0 129170.0 122530.0 100620.0 120680.0 110450.0 114840.0 113700.0 123110.0 150870.0 124280.0 True False 122004.68260598887 116643.4748787203 107106.12619769221 132149.3909162351 119141.78662546471 114123.24096226487 125193.90560506537 122682.96014408999 123475.81112320056 123178.97588837697 0.9904667718340813 0.9469430480118698 0.8695162906269838 1.0728242377659236 0.9672250135723591 0.9264831123915312 1.016357740451701 0.9959732110069135 1.0024097881369998 1.0 16.910396513181468 -6.186080614828568 0.5183441977152692 1.004524375207339 0.9494155006353586 0.09473559739324655 0.04991086287827953 2.589202924073781 1.4848073647071143 0.04520537023245889 0.06216461281973412 6.515074483930802e-07 6.186080614828568 -0.055108874571980326 VLLS(ph)PSIPSVGQDQTLSPGSK ddPTM_KYSE-520_SHP099_60min_R1 1 VLLSPSIPSVGQDQTLSPGSK 21 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 VLLS(0.771)PS(0.227)IPS(0.001)VGQDQTLSPGSK 57.496 0.026344 71894000.0 80364.0 95811.0 66023.0 88220.0 74188.0 124070.0 81142.0 119320.0 138400.0 123840.0 True False 75906.04871833774 91208.0957447571 70278.94822053498 96604.40227568982 80026.1735280215 123295.63310857043 89344.62522960601 118906.10676949736 113270.04878008195 122742.87394606216 0.6184151167235478 0.7430826150024593 0.5725704960388837 0.7870469312796231 0.6519822369744089 1.0045033910705983 0.7279007111147439 0.9687414262578631 0.9228238278815035 1.0 16.905279743204037 -6.407312984332227 0.5314459005709664 0.9897513144813386 0.6255550638174685 0.6076692622503527 0.09715542381574618 0.6315636404400397 0.38201455372349347 0.08253444640617838 0.09074464202632622 3.914596609963564e-07 6.407312984332227 -0.36419625066387007 VLLSPS(ph)IPSVGQDQTLS(ph)PGSK ddPTM_KYSE-520_SHP099_60min_R1 2 VLLSPSIPSVGQDQTLSPGSK 21 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 2 VLLS(0.393)PS(0.602)IPS(0.023)VGQDQT(0.033)LS(0.859)PGS(0.09)K;VLLS(0.136)PS(0.863)IPS(0.008)VGQDQT(0.011)LS(0.972)PGS(0.01)K 76.027 0.006956399999999999 87122000.0 162204.0 149968.0 151249.0 155192.0 175347.0 162529.0 168345.0 173049.0 206329.0 175144.0 True False 153206.22077434248 142763.3121734426 160998.7525469565 169941.401019824 189145.81131204477 161514.59622392853 185362.9554888717 172448.7334089402 168864.85473082023 173592.36041997027 0.8825631519940866 0.8224055011871302 0.9274529832848278 0.978968202337283 1.0895975540308698 0.9304245638067129 1.067805950909504 0.9934119968859039 0.9727666259176796 1.0 17.40534393243382 -5.091356269109874 2.5216514528721463 1.0084879451553337 0.8532583531836416 0.644510857776602 0.04544339371568794 0.16396439631658996 2.0325713774954295 0.012433431755804811 0.026719224598099483 8.10296066903701e-06 5.091356269109874 -0.15522959197169206 VLLSPS(ph)IPSVGQDQTLSPGSK ddPTM_KYSE-520_SHP099_60min_R1 1 VLLSPSIPSVGQDQTLSPGSK 21 0 Q13625;Q13625-3;Q13625-2 Q13625 TP53BP2 Apoptosis-stimulating of p53 protein 2 1 VLLS(0.417)PS(0.582)IPS(0.001)VGQDQTLSPGSK 102.37 0.0006082 62705000.0 66772.0 93699.0 64346.0 67391.0 61000.0 110920.0 77152.0 121970.0 101120.0 109610.0 True False 63068.02405331799 89197.55939493369 68493.84611724017 73795.82037815706 65800.35295747717 110227.70713631505 84951.27709095857 121546.91453801186 82759.15702775934 108638.94067528952 0.580528709699239 0.8210459236852825 0.6304723305611121 0.6792759568479694 0.6056792578100294 1.0146242815987518 0.7819597334336046 1.1188153509458725 0.7617817010487782 1.0 16.72918179166194 -6.259339031232221 24.999353731489 0.93326989610173 0.6712111480195238 0.5786179560461552 0.11597173488394583 136.12198362318523 1620194.5586621421 0.03641762430489058 0.03473645458543208 5.503778771255193e-07 6.259339031232221 -0.2620587480822062 VLMKS(ph)PSPALHPPQK ddPTM_KYSE-520_SHP099_60min_R1 1 VLMKSPSPALHPPQK 15 1 Q9H6S0 Q9H6S0 YTHDC2 Probable ATP-dependent RNA helicase YTHDC2 1 VLMKS(0.547)PS(0.453)PALHPPQK 89.374 0.0015205 561110000.0 888900.0 861350.0 730280.0 820400.0 792560.0 744750.0 696250.0 729860.0 948620.0 738200.0 True False 839590.9450217815 819969.4530872907 777355.017289313 898370.5693377462 854929.9629504611 740101.7389990151 766633.7447451772 727328.2860106044 776374.5207641725 731660.1223109092 1.1475149723480604 1.1206972036380243 1.0624537180379312 1.2278523072984913 1.1684796490619316 1.0115376203112498 1.0478003670936797 0.9940794418498264 1.0611136196845543 1.0 19.480814104192596 -6.264906718432415 24.996522459125334 1.0240920554033341 1.143999822769364 0.6707243350294632 0.0429035164934353 195.98771548059938 1412896.8024725916 0.015410712323340113 0.01414490151381606 5.433670280825356e-07 6.264906718432415 0.11990776736602982 VLNT(ph)GSDVEEAVADALK ddPTM_KYSE-520_SHP099_60min_R1 5 VLNTGSDVEEAVADALK 17 0 E3W994;J3KR49;O75122 E3W994 CLASP2 CLIP-associating protein 2 1 VLNT(0.625)GS(0.375)DVEEAVADALK;VLNT(0.633)GS(0.367)DVEEAVADALK;VLNT(0.608)GS(0.392)DVEEAVADALK;VLNT(0.682)GS(0.318)DVEEAVADALK;VLNT(0.598)GS(0.402)DVEEAVADALK 191.21 1.2043e-11 820754000.0 519164.0 498403.0 432026.0 411241.0 473016.0 531657.0 449281.0 532257.0 621669.0 541498.0 True False 490364.93799222383 474458.97176184534 459875.08722604054 450325.22099588515 510239.6681071151 528338.731454849 494698.7080400122 530410.7246967177 508789.5806001787 536700.7489990693 0.9136654623768266 0.8840288981274891 0.8568556837002625 0.8390620319344216 0.9506967692120732 0.9844195903213938 0.92174029747976 0.9882802021162028 0.9479949143895474 1.0 19.033758375919298 -5.861719920179651 6.16095676330581 0.9649334385761983 0.8732976143271813 0.7307810062775661 0.02748548128644257 0.11232534293272896 5.886650764793548 0.008568464946742993 0.009777262195908885 1.3749283909487542e-06 5.861719920179651 -0.09163582424901695 VLNT(ph)GSDVEEAVADALKKPAR ddPTM_KYSE-520_SHP099_60min_R1 1 VLNTGSDVEEAVADALKKPAR 21 2 E3W994;J3KR49;O75122 E3W994 CLASP2 CLIP-associating protein 2 1 VLNT(0.567)GS(0.433)DVEEAVADALKKPAR 106.04 0.00041491 421950000.0 364300.0 452580.0 454430.0 268100.0 315520.0 292020.0 230010.0 251840.0 522010.0 270050.0 True False 344091.55278595426 430837.37746357045 483723.28491370846 293580.1433927958 340349.6289367736 290197.39486068103 253261.65548127555 250966.42581989785 427226.1428012327 267657.5670957206 1.2855663171402103 1.6096588717385034 1.8072468122700887 1.0968497792846061 1.2715860516473145 1.0842114348177558 0.9462151891663247 0.9376399424946815 1.5961668763448285 1.0 18.030028914898978 -5.278956622002463 24.80841697060744 1.1265691564414306 1.5717074854794348 0.4584984874935566 0.216163546474816 621.7670677017744 880562.7202024153 0.060985695537738256 0.09069136556093584 5.2606980842428474e-06 5.278956622002463 0.4451383290380042 VLNTGS(ph)DVEEAVADALK ddPTM_KYSE-520_SHP099_60min_R1 7 VLNTGSDVEEAVADALK 17 0 E3W994;J3KR49;O75122 E3W994 CLASP2 CLIP-associating protein 2 1 VLNT(0.063)GS(0.937)DVEEAVADALK;VLNT(0.054)GS(0.946)DVEEAVADALK;VLNT(0.256)GS(0.744)DVEEAVADALK;VLNT(0.107)GS(0.893)DVEEAVADALK;VLNTGS(1)DVEEAVADALK;VLNT(0.003)GS(0.997)DVEEAVADALK;VLNT(0.001)GS(0.999)DVEEAVADALK 303.28 2.3827e-38 3346943000.0 2827506.0 2535732.0 2310240.0 2219035.0 2246057.0 2911852.0 2376139.0 2641779.0 3365536.0 2829189.0 True False 2670658.6056865337 2413911.628508669 2459161.7669146974 2429931.4192228024 2422808.9075838057 2893678.0515713445 2616342.3190018865 2632615.2852448523 2754439.5006583966 2804124.586535736 0.9524036908024517 0.8608432164887713 0.8769802093396957 0.8665561547765542 0.8640161422274699 1.0319363360193081 0.933033550493618 0.9388367756146067 0.9822814271106545 1.0 21.41911901866711 -6.242734552595341 24.995669538880733 0.9706334149570631 0.8814876520157192 0.6187364619119373 0.03631073952684229 572.926874944083 765615.1991744627 0.011879660735113519 0.011860530533580722 5.718280398915963e-07 6.242734552595341 -0.08914576294134391 VLPAFRES(ph)PSGR ddPTM_KYSE-520_SHP099_60min_R1 1 VLPAFRESPSGR 12 1 O43166-3;O43166-2;O43166;F5GYF8 O43166-3 SIPA1L1 Signal-induced proliferation-associated 1-like protein 1 1 VLPAFRES(0.993)PS(0.007)GR 128.95 4.9796e-05 407440000.0 176190.0 152030.0 142580.0 108840.0 128630.0 125620.0 106720.0 106020.0 153980.0 112920.0 True False 166416.38947394263 144726.2505983176 151770.93493606607 119184.12087606087 138752.44919541458 124835.95898362708 117508.29908682991 105652.24136525404 126021.11351992065 111919.61665043069 1.4869278009924476 1.2931267540913316 1.3560708969376374 1.0649082300587225 1.239750933286284 1.1154073139254868 1.049934788946382 0.9440011012122017 1.1259966509136152 1.0 16.77210340050932 -2.3682107136373807 0.29384810233311576 0.9891107779859956 2.90342359568678 0.7807978351318532 0.07627136108477663 10.468845567215137 0.30363480627933914 0.07956626199955248 8.914894074870997 0.004283406450537891 2.3682107136373807 1.9143128177007844 VLPCGPS(ph)PQHHR ddPTM_KYSE-520_SHP099_60min_R1 2 VLPCGPSPQHHR 12 0 P98174 P98174 FGD1 FYVE, RhoGEF and PH domain-containing protein 1 1 VLPCGPS(1)PQHHR;VLPCGPS(1)PQHHR 98.507 0.012029 0.0 488990.0 483760.0 346930.0 399690.0 448440.0 424540.0 376690.0 478180.0 455060.0 413670.0 True False 461864.7499226018 460519.4434614357 369293.66290762683 437676.41742881946 483729.67672542756 421890.2883848832 414769.50134012394 476521.30518805044 372432.57512907614 410005.20563039003 1.1264850874575527 1.1232038938466138 0.9007048150518759 1.0674899035876495 1.1798135001278456 1.0289876386720984 1.0116200859021014 1.1622323293563817 0.9083606013159142 1.0 18.645282701458928 -7.775965885072614 24.999830016979313 0.9541802864383675 1.0704477289400205 0.2646048664038039 0.08031727456818687 387.7605449012631 667308.2794205834 0.0767343460136216 0.020177534780811152 1.675074452183398e-08 7.775965885072614 0.116267442501653 VLPITVPKS(ph)PAFALK ddPTM_KYSE-520_SHP099_60min_R1 1 VLPITVPKSPAFALK 15 1 Q9ULW0;Q9ULW0-2 Q9ULW0 TPX2 Targeting protein for Xklp2 1 VLPIT(0.001)VPKS(0.999)PAFALK 108.49 0.00021042 144630000.0 158340.0 282510.0 349820.0 100430.0 138210.0 133930.0 96979.0 102890.0 330460.0 130650.0 True False 149556.5645570357 268937.79554384464 372369.95693179005 109974.83700461949 149086.34069267096 133094.09319118896 106782.58374383145 102533.09860470644 270456.7942186845 129492.54264416195 1.15494345468224 2.0768593314510024 2.875609277014826 0.8492754467477251 1.151312173260445 1.0278128027567106 0.8246234228117972 0.7918069759929071 2.088589726451539 1.0 16.98250949126701 -5.287317053689515 24.83102092299975 1.0831589921385878 2.039909784784888 0.40093741715603315 0.521043918814129 649.4259980147311 623157.7427096613 0.1468053927477675 0.21783398733414402 5.160395006473003e-06 5.287317053689515 0.9567507926463001 VLPKRT(ph)NFPGISS(ph)T(ph)DRGGLR ddPTM_KYSE-520_SHP099_60min_R1 2 VLPKRTNFPGISSTDRGGLR 20 3 A6NDY0;A6NDY0-4 A6NDY0 PABPN1L Embryonic polyadenylate-binding protein 2 3 VLPKRT(1)NFPGIS(0.283)S(0.859)T(0.859)DRGGLR;VLPKRT(1)NFPGIS(0.335)S(0.833)T(0.833)DRGGLR 60.306999999999995 0.030873 3062100000.0 1696130.0 1423820.0 1265060.0 1456950.0 1353330.0 1557240.0 1662940.0 1640070.0 1566630.0 1627460.0 True False 1602042.2877486718 1355417.5500026103 1346607.791767567 1595418.0899520088 1459829.371605615 1547520.687531152 1831046.2039304057 1634380.9799652142 1282169.4835284657 1613041.9705447205 0.9931807832673231 0.8402865980882623 0.8348250177971628 0.9890741338945073 0.9050163593155818 0.9593802987088785 1.1351509987753545 1.013229047855021 0.7948767031123686 1.0 20.621352546508973 -5.839978700418216 1.4983329230261064 0.9872442952368504 0.893283825921968 0.1102777391838371 0.09219035058168555 0.7939563580580847 3.704656742245755 0.0366746291626969 0.046904384254898006 1.4455106627762723e-06 5.839978700418216 -0.09396046931488244 VLPNGEVSLS(ph)VPDLIHK ddPTM_KYSE-520_SHP099_60min_R1 3 VLPNGEVSLSVPDLIHK 17 0 A1L170;A1L170-2 A1L170 C1orf226 Uncharacterized protein C1orf226 1 VLPNGEVS(0.027)LS(0.973)VPDLIHK;VLPNGEVS(0.099)LS(0.901)VPDLIHK;VLPNGEVS(0.035)LS(0.965)VPDLIHK 108.08 0.00018828 304639000.0 278436.0 258292.0 226414.0 273302.0 244803.0 313154.0 231566.0 279911.0 357315.0 266630.0 True False 262990.6000315949 245883.26461580375 241009.00871520865 299276.5399087578 264067.60336146364 311199.4897274215 254974.95114637224 278940.0540727185 292435.603178143 264267.8656350011 0.9951667767084088 0.9304319464834608 0.911987570399812 1.1324742007115978 0.9992421996785108 1.1775911118805529 0.9648352459868732 1.0555201382599508 1.1065878269968938 1.0 18.01164148168057 -5.250071841589237 24.98067181603048 1.0627475369605497 0.9443190775184488 0.4074669236672225 0.06434728648669952 697.3276535555054 1532405.7173154799 0.01662674147826114 0.028476010241603417 5.622483096101547e-06 5.250071841589237 -0.1184284594421009 VLPPPAGYVPIRT(ph)PAR ddPTM_KYSE-520_SHP099_60min_R1 4 VLPPPAGYVPIRTPAR 16 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VLPPPAGYVPIRT(1)PAR;VLPPPAGYVPIRT(1)PAR;VLPPPAGYVPIRT(1)PAR;VLPPPAGYVPIRT(1)PAR 136.99 6.3487e-05 1677010000.0 809250.0 874760.0 716790.0 688130.0 671110.0 786200.0 659240.0 829120.0 933150.0 869730.0 True False 764359.2893001204 832735.2165584713 762995.4303045507 753529.6683061715 723922.5389064343 781293.0341739176 725882.4127623853 826243.9762380631 763713.4827972068 862024.8688397008 0.8867021323050229 0.9660222653197305 0.8851199749394175 0.8741391293274804 0.8397931023508006 0.9063462811989988 0.8420666723216867 0.9584920413609419 0.8859529584397923 1.0 19.717369965136538 -8.664953309131207 0.8691228065188582 1.0005618713114184 0.890503107236461 0.39378056623593416 0.03959918998999588 2.786468644709749 2.791957806819738 0.04447775951090821 0.013149985751428691 2.1629510494425268e-09 8.664953309131207 -0.1100587640749574 VLPQGPPT(ph)PAK ddPTM_KYSE-520_SHP099_60min_R1 1 VLPQGPPTPAK 11 0 H3BPZ6;Q8IWY9-1;Q8IWY9 H3BPZ6 CDAN1 Codanin-1 1 VLPQGPPT(1)PAK 120.9 0.0010536 742880000.0 654990.0 893650.0 657800.0 492710.0 663510.0 906100.0 620530.0 771730.0 993600.0 949920.0 True False 618656.3990098062 850717.7126040038 700202.8405172126 539537.0102613367 715724.4621445197 900444.6937992702 683259.2281891927 769053.0487531357 813187.2866176981 941504.4478265772 0.657093442774432 0.9035726964092939 0.7437063543710292 0.5730583764174825 0.7601923323854062 0.9563892086520762 0.7257100375536912 0.8168342173299996 0.8637105098068376 1.0 19.844608384828295 -6.017681580910604 24.280840401894988 0.8526143341535104 0.7258014085048794 0.3199911224076367 0.10486860242213837 756.8935987434586 1039387.1145698981 0.034706340766854006 0.03546107103093787 9.601043095656429e-07 6.017681580910604 -0.126812925648631 VLPSFWIPSLT(ph)PEAK ddPTM_KYSE-520_SHP099_60min_R1 2 VLPSFWIPSLTPEAK 15 0 A0A075B797;M0R3B2;Q9Y314;A0A075B6F9 A0A075B797 NOSIP Nitric oxide synthase-interacting protein 1 VLPSFWIPS(0.032)LT(0.968)PEAK;VLPSFWIPSLT(1)PEAK 244.0 3.4738e-18 3514200000.0 2226280.0 2836770.0 2065490.0 1696590.0 1910270.0 2443810.0 1665060.0 2111690.0 2647170.0 2201590.0 True False 2102783.810420849 2700487.3111214223 2198634.7903008494 1857833.4035016182 2060597.381050491 2428557.275304708 1833380.514219611 2104365.0402621496 2166510.657725215 2182085.6254110993 0.9636577895629965 1.2375716514848758 1.007584104261093 0.8514026131085517 0.9443247125842185 1.1129523273621191 0.8401964124914698 0.9643824310815909 0.9928623480653056 1.0 21.057276283695245 -4.988962193328022 24.969111403916592 0.955354037848618 1.106105565896781 0.2609584877207035 0.09491174429725432 253.11680613954502 572577.7164533439 0.023859523099108586 0.0495981164281088 1.0257412162963209e-05 4.988962193328022 0.15075152804816305 VLPSIS(ph)LSPGPQPPKS(ph)PGPHS(ph)EEEDEAEPSTVPGT(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 1 VLPSISLSPGPQPPKSPGPHSEEEDEAEPSTVPGTPPPK 39 1 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 4 VLPS(0.168)IS(0.501)LS(0.517)PGPQPPKS(0.746)PGPHS(0.669)EEEDEAEPS(0.257)T(0.257)VPGT(0.885)PPPK 46.351000000000006 0.037505000000000004 100910000.0 49829.0 44111.0 45089.0 43898.0 43869.0 48585.0 48040.0 52655.0 60471.0 48938.0 True False 47064.886038351164 41991.84134803913 47995.50908495075 48070.05272158503 47321.24071953388 48281.762993309334 52896.35202521844 52472.35209476941 49490.99074985793 48504.44739318786 0.9703210441061767 0.8657317752255563 0.989507388794443 0.9910442300665436 0.9756062229910045 0.9954089900649028 1.0905464316793225 1.0818049666542293 1.0203392350534979 1.0 15.565829414229308 -5.776576798713576 0.8367387469470922 1.0511700175645609 0.9252849826332158 0.5007360152591855 0.041790766268431735 0.5037679940177293 0.7655653885993148 0.022746822717306638 0.037347119445333934 1.67271981387662e-06 5.776576798713576 -0.12588503493134506 VLPSISLS(ph)PGPQPPK ddPTM_KYSE-520_SHP099_60min_R1 5 VLPSISLSPGPQPPK 15 0 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 1 VLPSIS(0.063)LS(0.937)PGPQPPK;VLPS(0.001)IS(0.108)LS(0.891)PGPQPPK;VLPSISLS(1)PGPQPPK;VLPSISLS(1)PGPQPPK;VLPSISLS(1)PGPQPPK 285.18 5.5137e-33 2264934000.0 1239320.0 1302370.0 977826.0 913009.0 911300.0 1358370.0 949894.0 1353320.0 1206560.0 1340020.0 True False 1170572.4490768306 1239802.1903027745 1040858.2285369169 999781.1008538335 983014.1254122772 1349891.9089682335 1045918.5555920663 1348625.6487872638 987479.118902426 1328148.4653197834 0.8813566251382803 0.9334816269988782 0.7836911728737385 0.7527630584681001 0.7401387352998922 1.0163712447939433 0.7875012341637848 1.015417842208288 0.7435005533546785 1.0 20.340984994780598 -6.248080352744484 24.945578719226944 0.9057057390245088 0.8191238700548489 0.17684764937043562 0.10114659826438191 1529.8242281235343 2856672.84840169 0.03286491172489235 0.03269086589240449 5.648324603891674e-07 6.248080352744484 -0.08658186896965991 VLPSISLS(ph)PGPQPPKS(ph)PGPHS(ph)EEEDEAEPSTVPGT(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 2 VLPSISLSPGPQPPKSPGPHSEEEDEAEPSTVPGTPPPK 39 1 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 4 VLPS(0.021)IS(0.064)LS(0.915)PGPQPPKS(0.992)PGPHS(0.992)EEEDEAEPS(0.009)T(0.009)VPGT(0.997)PPPK;VLPS(0.106)IS(0.358)LS(0.601)PGPQPPKS(0.818)PGPHS(0.819)EEEDEAEPS(0.154)T(0.154)VPGT(0.99)PPPK 83.18299999999999 0.0013032 1538470000.0 370920.0 324318.0 309080.0 363800.0 318265.0 386540.0 302842.0 377610.0 499980.0 349367.0 True False 350344.32818931143 308737.27646875754 329003.7913454851 398375.44261954207 343310.64481986 384127.4604802677 333456.22481309756 376300.1590448362 409196.23547012574 346271.88018341304 1.011760839499128 0.8916036621432436 0.9501314145729032 1.1504700942176733 0.9914482361028434 1.1093232874607182 0.9629896156640635 1.0867187911577394 1.1817195068031021 1.0 18.40154570930918 -5.168456168019532 9.085613333316342 1.0665394844390748 0.9444796605784678 0.36377251148521705 0.0711876774401804 0.39733261928955516 36.113932183243385 0.018725522894271117 0.03251499337643927 6.784905949713076e-06 5.168456168019532 -0.12205982386060699 VLPSISLS(ph)PGPQPPKS(ph)PGPHS(ph)EEEDEAEPSTVPGT(ph)PPPKK ddPTM_KYSE-520_SHP099_60min_R1 1 VLPSISLSPGPQPPKSPGPHSEEEDEAEPSTVPGTPPPKK 40 2 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 4 VLPS(0.08)IS(0.44)LS(0.48)PGPQPPKS(0.999)PGPHS(1)EEEDEAEPS(0.004)T(0.003)VPGT(0.993)PPPKK 110.07 4.7947e-05 2015900000.0 235940.0 186440.0 209410.0 220350.0 215590.0 236910.0 189070.0 190450.0 261860.0 176800.0 True False 222851.93786527062 177483.14254785486 222908.90366784678 241291.99774935664 232555.70646069647 235431.35681269746 208183.04074537972 189789.37340136437 214312.82495341226 175233.68954831868 1.2717414010952601 1.0128368751769956 1.2720664858590573 1.3769726493307848 1.3271175597576623 1.3435279335814017 1.1880309162124651 1.0830644146714272 1.2230115425054606 1.0 17.41892064133842 -7.923917001464533 0.8694956648563325 1.0142956811576682 1.257904709139831 0.3338734269779331 0.10541752174044239 0.7672034716828304 1.3148274218082174 0.10990392254572959 0.03961303839792694 1.191469689461253e-08 7.923917001464533 0.24360902798216277 VLPSISLSPGPQPPKS(ph)PGPHS(ph)EEEDEAEPSTVPGT(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 3 VLPSISLSPGPQPPKSPGPHSEEEDEAEPSTVPGTPPPK 39 1 Q99638 Q99638 RAD9A Cell cycle checkpoint control protein RAD9A 3 VLPSISLSPGPQPPKS(0.999)PGPHS(0.998)EEEDEAEPS(0.002)T(0.002)VPGT(0.999)PPPK;VLPSISLSPGPQPPKS(0.999)PGPHS(0.999)EEEDEAEPS(0.001)T(0.001)VPGT(0.999)PPPK;VLPS(0.243)IS(0.243)LS(0.213)PGPQPPKS(0.519)PGPHS(0.629)EEEDEAEPS(0.123)T(0.122)VPGT(0.907)PPPK 108.74 9.3228e-05 819570000.0 382815.0 351064.0 336266.0 376499.0 340802.0 366719.0 330178.0 368259.0 473830.0 366961.0 True False 361579.48882721696 334198.35848219274 357942.24440462334 412281.35176144785 367621.17850187136 364430.170693494 363555.61446674785 366981.5954812965 387794.4162822703 363710.0110313382 0.9941422503106805 0.9188593889250889 0.9841418535322695 1.133544140268178 1.010753532627388 1.0019800380531558 0.9995754954224314 1.0089950354698276 1.0662187031438541 1.0 18.472429110613888 -5.008409042470578 24.813252462717788 1.0308534973385073 0.9552507523027536 0.34465835211693496 0.042753567292613794 386.8641801292604 1141564.4399707592 0.011449845321589987 0.022133033068188063 9.808237140309088e-06 5.008409042470578 -0.0756027450357537 VLPTHDASK ddPTM_KYSE-520_SHP099_60min_R1 3 VLPTHDASK 9 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ;; 126.55 0.0010927999999999999 2949330000.0 2964490.0 3460120.0 2687490.0 13204700.0 5883240.0 2189630.0 4134330.0 3808820.0 5969590.0 1556900.0 False True 2800043.830135694 3293890.6414539944 2860729.905536037 14459670.71786218 6346217.516943416 2175963.7069679913 4552268.423572469 3795608.09240527 4885662.937117704 1543107.0772498727 1.8145492762083206 2.1345833286724147 1.8538764728073396 9.37049083050816 4.1126229090036 1.4101184156617286 2.950066454030868 2.459717895384037 3.1661204910192873 1.0 20.557406744296678 -6.242510071448834 23.667944403310777 2.335490874335081 3.9565179627558473 0.12937066667983654 2.1304220380388856 1013.1418805067807 1266764.2464837658 0.7570774884803031 0.7555799261144592 5.721236867396751e-07 6.242510071448834 1.6210270884207665 VLQALEGLK ddPTM_KYSE-520_SHP099_60min_R1 1 VLQALEGLK 9 0 P39019;A0A075B6E2 P39019 RPS19 40S ribosomal protein S19 0 142.92 0.0088705 0.0 82546.0 100160.0 85658.0 64349.0 91757.0 96695.0 89605.0 103110.0 88423.0 76920.0 False True 77967.00882862866 95348.16325677489 91179.65173764592 70464.70961276769 98977.7538740858 96091.49063781103 98663.14786052653 102752.33547605491 72367.61216243627 76238.54864285453 1.0226717351857162 1.2506555404594708 1.1959783254109961 0.9242661470756108 1.2982638787859784 1.260405560551253 1.2941372785403065 1.3477740238393874 0.9492259946008159 1.0 16.218233034399525 -4.244822674318324 23.05554565484954 1.183842041434333 1.0226713611156883 0.07315148907369795 0.14792789982759344 2837.172138590757 3936364.1866685925 0.0364401675224203 0.8780349454102575 5.690852451701474e-05 4.244822674318324 -0.16117068031864457 VLQDMGLPTGAEGRDS(ph)SK ddPTM_KYSE-520_SHP099_60min_R1 1 VLQDMGLPTGAEGRDSSK 18 1 Q12906;Q12906-5;Q12906-2;Q12906-3;Q12906-7;Q12906-4;Q12906-6 Q12906;Q12906-7 ILF3 Interleukin enhancer-binding factor 3 1 VLQDMGLPTGAEGRDS(0.96)S(0.04)K 159.59 2.0350999999999998e-08 784980000.0 637120.0 717390.0 612580.0 515820.0 714270.0 704880.0 681330.0 712270.0 744550.0 726920.0 True False 601777.6835327682 682925.5075756571 652067.8869626549 564843.3777130615 770478.9853596255 700480.5824580404 750205.4855400091 709799.3016150679 609358.4885781067 720480.0543352031 0.8352454449110832 0.9478756607714864 0.905046410430233 0.7839819774528669 1.0693966900590428 0.9722414635119685 1.0412578127957117 0.985175505337215 0.845767325426337 1.0 19.458598966030458 -5.764593133932174 24.99999959282339 0.9870095495882141 0.8763836163549737 0.4157756986455535 0.06799501100617138 88.98940265934743 705424.2606763721 0.02099087332051045 0.024812599139184363 1.7195185529996219e-06 5.764593133932174 -0.11062593323324033 VLQLEDDS(ph)LDSK ddPTM_KYSE-520_SHP099_60min_R1 1 VLQLEDDSLDSK 12 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VLQLEDDS(1)LDSK 132.84 5.356e-05 74570000.0 80334.0 91445.0 79416.0 79923.0 73500.0 76056.0 65703.0 80758.0 84267.0 73186.0 True False 75877.71287814135 87051.8449382567 84535.28243009267 87518.8578902738 79284.03184220602 75581.30629245933 72344.90043948633 80477.86934705898 68966.23699820202 72537.62897784643 1.0460462238339086 1.2000922302663495 1.1653990297354553 1.2065304466596607 1.0930055608299523 1.0419599779797388 0.9973430543419202 1.1094637429028396 0.9507649749520329 1.0 16.146441968560325 -6.087199804113469 2.9347903737791197 1.0247381869335055 1.1583063672686411 0.558649051839747 0.05609067945998377 0.20029517731912258 3.3526998816778453 0.01891359515533862 0.01948907064696143 8.180883269406454e-07 6.087199804113469 0.13356818033513562 VLQLLR ddPTM_KYSE-520_SHP099_60min_R1 1 VLQLLR 6 0 P18124;A8MUD9;C9JZ88;C9JIJ5;A0A2R8YFJ4;H0Y4W2;F2Z2U4;Q9Y4A5-2;Q9Y4A5 P18124 RPL7;TRRAP 60S ribosomal protein L7;Transformation/transcription domain-associated protein 0 120.06 0.061671000000000004 152540000.0 109940.0 146700.0 113480.0 86495.0 143880.0 154960.0 107790.0 126800.0 129970.0 106780.0 False True 103841.40904004358 139652.31179881076 120795.10237441972 94715.45879432997 155202.5374347837 153992.83716050643 118686.46512902377 126360.1603953424 106370.72427707566 105834.01227358302 0.9811723736941153 1.319540937726208 1.141363723999823 0.8949434757277144 1.4664712609929411 1.455041095507481 1.1214397203634017 1.1939466120654945 1.0050712619881141 1.0 16.69144382072414 -7.757483870487992 4.905997144813907 0.9965995281805965 1.2050064617235026 0.1658422339878718 0.17358095486432715 0.327065661256745 20.64485774536891 0.15212425403103108 0.045999265898247266 1.7478981774062966e-08 7.757483870487992 0.20840693354290607 VLQNFHPDEAES(ph)DEDNDVVIEGTLEPARPPQTPGAPAGSLSR ddPTM_KYSE-520_SHP099_60min_R1 3 VLQNFHPDEAESDEDNDVVIEGTLEPARPPQTPGAPAGSLSR 42 1 Q9BYG4 Q9BYG4 PARD6G Partitioning defective 6 homolog gamma 1 VLQNFHPDEAES(1)DEDNDVVIEGTLEPARPPQTPGAPAGSLSR;VLQNFHPDEAES(1)DEDNDVVIEGTLEPARPPQTPGAPAGSLSR;VLQNFHPDEAES(1)DEDNDVVIEGTLEPARPPQTPGAPAGSLSR 260.93 4.2164999999999995e-42 2822140000.0 456443.0 504150.0 429650.0 397539.0 403763.0 413214.0 348331.0 449699.0 551410.0 395387.0 True False 431123.1968934381 479929.87725542247 457345.9264643055 435320.9870355418 435536.8510027842 410634.978152049 383543.696862955 448139.0991295358 451287.84391492093 391884.1787864314 1.1001291203654107 1.2246727559700086 1.1670436093658922 1.110840933623867 1.11139176976099 1.047847809073804 0.9787169720673471 1.1435498634247292 1.1515847496381406 1.0 18.5800678038273 -5.594645047376668 1.8237726895119117 1.0705358261839022 1.1695170597431397 0.33117970829789045 0.059055286671850026 0.4261357977640948 2.8852763245668607 0.020672423011356994 0.031233426226297788 2.5430503133504416e-06 5.594645047376668 0.09898123355923749 VLRDNIQGITKPAIR ddPTM_KYSE-520_SHP099_60min_R1 4 VLRDNIQGITKPAIR 15 2 P62805 P62805 HIST1H4A Histone H4 0 ;;; 173.03 1.6458e-08 15843430000.0 4109770.0 3491590.0 9344800.0 3043380.0 4787580.0 3229010.0 5290360.0 3299030.0 12025360.0 3606990.0 False True 3881792.865476619 3323848.775416563 9947180.760208644 3332621.92017444 5164335.308396038 3208856.550849553 5825161.217738028 3287586.4349293914 9841857.758656412 3575034.874795755 1.0858055939100144 0.9297388394306104 2.782401041829539 0.9321928419970549 1.4445552251266027 0.8975734959880295 1.6293998301403492 0.9195956263551734 2.7529403497689477 1.0 21.769525884907363 VLS(ph)AHRK ddPTM_KYSE-520_SHP099_60min_R1 1 VLSAHRK 7 1 P46019 P46019 PHKA2 Phosphorylase b kinase regulatory subunit alpha, liver isoform 1 VLS(1)AHRK 67.507 0.020593 505840000.0 572190.0 470350.0 425570.0 358890.0 443210.0 524090.0 441910.0 415040.0 526670.0 451230.0 True False 540449.4800675137 447753.6799902561 453002.9231360752 392998.79769578687 478088.1054800562 520818.959908686 486582.5754259847 413600.32311106403 431040.0042702727 447232.45325162815 1.2084308196736306 1.0011654492755129 1.0129026188562402 0.8787349729172548 1.0689924266543949 1.164537493024138 1.0879858379870675 0.9247994417756585 0.9637941100570243 1.0 18.770665355029365 -4.2590480821531775 23.929615997817688 1.0139590530851814 1.2084309479430653 0.36641716776222755 0.07764899436051491 149.52963504736772 1496156.548167443 0.021233774309365638 0.13810540637193347 5.5074671807129696e-05 4.2590480821531775 0.19447189485788385 VLS(ph)AMIR ddPTM_KYSE-520_SHP099_60min_R1 3 VLSAMIR 7 0 H0Y8X4;O43598 H0Y8X4 DNPH1 2-deoxynucleoside 5-phosphate N-hydrolase 1 1 VLS(1)AMIR;VLS(1)AMIR;VLS(1)AMIR 99.44200000000001 0.0053379 195157000.0 207541.0 183279.0 184068.0 202713.0 181931.0 158941.0 163863.0 208521.0 212958.0 215750.0 True False 196028.2870072734 174474.00173261258 195933.31779921285 221978.78257211414 196247.93465420933 157948.99026282955 180427.87118876708 207797.6893201674 174290.19543431155 213838.62285096012 0.9167113236784168 0.8159143535740798 0.9162672074247934 1.0380668356942586 0.9177384891362164 0.7386363985935124 0.8437571696976395 0.9717500353759616 0.8150547974478269 1.0 17.706162926013306 -10.275136234179834 4.5937724854258155 1.0000527911052013 0.8871711859222325 0.14889025229071784 0.08173267805580511 4.654169116906561e-05 7.34404658487224e-06 0.08334812038678206 0.02020544104227802 5.307179367866979e-11 10.275136234179834 -0.11288160518296875 VLS(ph)DS(ph)EDEEKDADVPGTSTR ddPTM_KYSE-520_SHP099_60min_R1 3 VLSDSEDEEKDADVPGTSTR 20 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 2 VLS(1)DS(1)EDEEKDADVPGTSTR;VLS(0.999)DS(0.999)EDEEKDADVPGTSTR;VLS(1)DS(0.998)EDEEKDADVPGT(0.001)S(0.001)T(0.001)R 102.9 0.00013104 1223810000.0 1174450.0 1125920.0 1176090.0 1096710.0 998990.0 1089280.0 1110130.0 1166920.0 1458380.0 1136040.0 True False 1109300.9172919684 1071829.113159625 1251902.6432105328 1200940.9886621137 1077604.829524429 1082481.3994721011 1222352.7742247253 1162872.2268811748 1193574.9547680358 1125975.5694257454 0.9851909290160876 0.9519115176773015 1.1118381936554902 1.066578193410183 0.957041039597346 0.9613720127375174 1.0855944013493408 1.0327686127988078 1.0600362806954742 1.0 20.10274409456586 -6.769627109781886 24.999422507591618 1.0473305265274735 1.0085983894638906 0.1174098636782489 0.05171819068471335 467.4803498851125 1427335.962021165 0.023017235713126326 0.01581560758757811 1.699702410082851e-07 6.769627109781886 -0.038732137063582917 VLS(ph)EDEEDVDFDIIHNANDTFTVK ddPTM_KYSE-520_SHP099_60min_R1 4 VLSEDEEDVDFDIIHNANDTFTVK 24 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 1 VLS(1)EDEEDVDFDIIHNANDTFTVK;VLS(1)EDEEDVDFDIIHNANDTFTVK;VLS(1)EDEEDVDFDIIHNANDTFTVK;VLS(1)EDEEDVDFDIIHNANDTFTVK 281.11 1.5386e-39 259101000.0 373801.0 409179.0 329552.0 315125.0 329878.0 356144.0 308778.0 358122.0 464341.0 351991.0 True False 353065.51337618066 389521.4266498 350795.4492218437 345074.38525421394 355837.52185092843 353921.17319109116 339992.2936228748 356879.7583683035 380028.3794840466 348872.63358485437 1.0120183682745252 1.116514708096354 1.0055115118008293 0.9891127937103825 1.0199639856944527 1.014471010679056 0.9745456103256672 1.022951427004095 1.0893040694509344 1.0 18.41234090791096 -4.8081273696216185 24.999120813806936 1.013165176071138 1.064267121021807 0.22383570920336893 0.03701685374251265 148.154744676262 79328.93653854863 0.009506019070373397 0.019788450705967877 1.555509365860544e-05 4.8081273696216185 0.05110194495066911 VLS(ph)KPPEGVVSEVEMLSSQER ddPTM_KYSE-520_SHP099_60min_R1 1 VLSKPPEGVVSEVEMLSSQER 21 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VLS(1)KPPEGVVSEVEMLSSQER 103.29 0.00053733 41418000.0 25391.0 32283.0 23014.0 26652.0 28037.0 30653.0 27976.0 33497.0 41601.0 32734.0 True False 23982.510614296378 30732.07622222909 24497.519263701943 29184.998066784017 30243.352391291588 30461.68325684698 30804.087099448596 33380.80672525857 34047.30707586841 32444.002226666646 0.7391970462443278 0.9472344382028652 0.7550708168663216 0.8995498725122155 0.9321708271377728 0.9389002948535634 0.9494539817942018 1.0288745048174708 1.0494176038455565 1.0 14.985664178032373 -6.097289475936901 0.6026514741434742 1.0333839426254599 0.8046381838496968 0.6574453689928368 0.057723067393450685 0.5359896003489424 0.4268814253754592 0.0435762487542637 0.057997457902060234 7.993013087370458e-07 6.097289475936901 -0.2287457587757631 VLS(ph)PLIIK ddPTM_KYSE-520_SHP099_60min_R1 8 VLSPLIIK 8 0 Q8NCN4 Q8NCN4 RNF169 E3 ubiquitin-protein ligase RNF169 1 VLS(1)PLIIK;VLS(1)PLIIK;VLS(1)PLIIK;VLS(1)PLIIK;VLS(1)PLIIK;VLS(1)PLIIK;VLS(1)PLIIK;VLS(1)PLIIK 163.88 0.00019084 18538215000.0 10645020.0 12578250.0 9856090.0 7761070.0 8626060.0 10587780.0 8112020.0 10427360.0 11908800.0 11759260.0 True False 10054519.52027874 11973971.989661837 10491429.331701571 8498679.759349218 9304881.846432379 10521697.737682434 8932062.147285854 10391189.921924122 9746462.116417918 11655082.104965849 0.8626725603241215 1.0273605867229472 0.9001591955522575 0.7291823157323112 0.798354036688242 0.9027562090874918 0.7663662998547385 0.8915587061799226 0.8362413948388463 1.0 23.474455831870923 -5.004227499002396 24.95983577861281 0.8369905228131121 0.9497024200173568 0.19016827856846774 0.08098371364009177 230.62211181499774 1361664.0008144106 0.02015999978057767 0.04043132931407839 9.903130475571363e-06 5.004227499002396 0.11271189720424468 VLS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 9 VLSPLR 6 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(1)PLR;VLS(1)PLR;VLS(1)PLR;VLS(1)PLR;VLS(1)PLR;VLS(1)PLR;VLS(1)PLR;VLS(1)PLR;VLS(1)PLR 110.67 0.0089748 43056090000.0 11230650.0 10373300.0 9467510.0 8031440.0 8753900.0 9345190.0 8295020.0 9214070.0 10410970.0 8930270.0 True False 10607663.45675428 9874951.097359266 10077800.843151588 8794745.642859524 9442782.127122287 9286863.202787781 9133561.573193751 9182108.541750109 8520600.287196321 8851154.755444927 1.1984496655906745 1.1156681100038992 1.1385859948897707 0.9936269205381703 1.0668418288939543 1.049226169848044 1.0319062117375246 1.0373910292441322 0.9626540855536099 1.0 23.077434256302336 -1.0000000126861217 0.33118192225113163 1.0002379704553228 3.090090862023814 0.7677193669663221 0.03317613197522373 27.22321254208926 0.38776331502932965 0.029487162718754654 34.86375850492864 0.09999999707891256 1.0000000126861217 2.0898528915684915 VLS(ph)PLRS(ph)PPLIGSESAYESFLS(ph)ADDK ddPTM_KYSE-520_SHP099_60min_R1 1 VLSPLRSPPLIGSESAYESFLSADDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 VLS(1)PLRS(0.998)PPLIGS(0.002)ES(0.001)AYES(0.027)FLS(0.972)ADDK 68.741 0.0027397 0.0 18573.0 18351.0 15247.0 20192.0 15902.0 15283.0 17089.0 22892.0 20432.0 16822.0 True False 17542.718665642413 17469.390414587426 16229.846016062553 22111.04160905384 17153.39692999675 15187.613128058996 18816.52289256782 22812.592995032974 16722.063848805163 16672.97016731797 1.0521651805045094 1.0477671488209452 0.9734226027631225 1.3261609291663863 1.028814707748983 0.9109122715177322 1.128564539115628 1.3682380983173457 1.0029445072470307 1.0 14.025223512305864 -6.986925844919171 24.960608336975202 1.1610350801329106 1.0597237805680508 0.034592299519696 0.13985528018067123 542.0501719915031 1034856.5495056139 0.0583354964344188 0.03930577774392988 1.0305620722275679e-07 6.986925844919171 -0.10131129956485974 VLS(ph)PLRS(ph)PPLIGSESAYESFLSADDK ddPTM_KYSE-520_SHP099_60min_R1 21 VLSPLRSPPLIGSESAYESFLSADDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VLS(1)PLRS(1)PPLIGSESAYESFLSADDK;VLS(1)PLRS(0.969)PPLIGS(0.031)ESAYESFLSADDK;VLS(1)PLRS(1)PPLIGSESAYESFLSADDK;VLS(0.999)PLRS(0.997)PPLIGS(0.002)ES(0.002)AYESFLSADDK;VLS(0.996)PLRS(0.98)PPLIGS(0.015)ES(0.008)AY(0.001)ESFLSADDK;VLS(1)PLRS(1)PPLIGSESAYESFLSADDK;VLS(0.993)PLRS(0.865)PPLIGS(0.094)ES(0.02)AY(0.022)ES(0.006)FLSADDK;VLS(1)PLRS(1)PPLIGSESAYESFLSADDK;VLS(1)PLRS(1)PPLIGSESAYESFLSADDK;VLS(1)PLRS(0.995)PPLIGS(0.004)ES(0.001)AYESFLSADDK;VLS(0.982)PLRS(0.755)PPLIGS(0.115)ES(0.134)AY(0.013)ESFLSADDK;VLS(1)PLRS(0.999)PPLIGS(0.001)ESAYESFLSADDK;VLS(0.998)PLRS(0.976)PPLIGS(0.019)ES(0.003)AY(0.003)ESFLSADDK;VLS(0.995)PLRS(0.978)PPLIGS(0.021)ES(0.005)AY(0.001)ESFLSADDK;VLS(0.999)PLRS(0.992)PPLIGS(0.007)ES(0.002)AYESFLSADDK;VLS(0.995)PLRS(0.973)PPLIGS(0.025)ES(0.006)AY(0.001)ESFLSADDK;VLS(0.994)PLRS(0.885)PPLIGS(0.095)ES(0.02)AY(0.005)ESFLSADDK;VLS(0.999)PLRS(0.944)PPLIGS(0.057)ESAYESFLSADDK;VLS(0.975)PLRS(0.889)PPLIGS(0.116)ES(0.019)AY(0.001)ESFLSADDK;VLS(1)PLRS(1)PPLIGSESAYESFLSADDK;VLS(0.998)PLRS(0.99)PPLIGS(0.007)ES(0.002)AY(0.003)ESFLSADDK 273.01 1.291e-38 128963499000.0 4184592.0 4052096.0 3681884.0 4457165.0 4053837.0 4159941.0 3946083.0 4671134.0 5521493.0 4564765.0 True False 3952464.3399826623 3857427.2258399012 3919224.133862693 4880772.621504481 4372850.908722625 4133977.265167237 4344991.579698793 4654930.926404868 4518929.0567115685 4524324.733433432 0.8736031502723735 0.8525973384126577 0.8662561519735259 1.0787847710039475 0.9665201254031437 0.9137224909207684 0.9603624486966155 1.0288675549759492 0.9988074072840106 1.0 22.109271051812968 -5.176448548106578 10.237102627353195 0.9879109653347695 0.8625979172979384 0.6673814645251752 0.0414142260488704 0.35059602276368335 40.650710575875934 0.011946711052880579 0.020719422005471028 6.661184332485802e-06 5.176448548106578 -0.12531304803683108 VLS(ph)PLRS(ph)PPLIGSESAYESFLSADDKAS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 2 VLSPLRSPPLIGSESAYESFLSADDKASGR 30 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 VLS(1)PLRS(1)PPLIGS(0.04)ES(0.033)AY(0.001)ES(0.008)FLS(0.006)ADDKAS(0.913)GR;VLS(1)PLRS(1)PPLIGS(0.02)ES(0.089)AYES(0.071)FLS(0.008)ADDKAS(0.812)GR 124.53 0.00048293 311260000.0 55672.0 52436.0 53646.0 56688.0 48265.0 51112.0 47951.0 56112.0 75740.0 52645.0 True False 52583.763180619455 49916.895851959365 57104.10699663488 62075.61047613131 52063.18090971531 50792.99104896628 52798.355036662135 55917.360568639226 61987.52525002461 52178.60625719025 1.0077648092291345 0.9566544496400913 1.0943969395266453 1.1896755189312334 0.9977878798274908 0.9734447639058387 1.0118774498578424 1.0716530122138663 1.1879873706186372 1.0 15.67117078839063 -7.521892431019495 24.998940348185297 1.1059358518179867 1.0353676908423097 0.09392449183652396 0.07616192641956047 85.86795999375957 2176712.6868853224 0.05246312862946488 0.02038468861991462 3.0068209600577785e-08 7.521892431019495 -0.07056816097567697 VLS(ph)PLRS(ph)PPLIGSESAYESFLSADDKASGR ddPTM_KYSE-520_SHP099_60min_R1 14 VLSPLRSPPLIGSESAYESFLSADDKASGR 30 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VLS(0.999)PLRS(0.997)PPLIGS(0.001)ES(0.001)AYESFLS(0.001)ADDKASGR;VLS(1)PLRS(1)PPLIGSESAYESFLSADDKASGR;VLS(1)PLRS(1)PPLIGSESAYESFLSADDKASGR;VLS(1)PLRS(1)PPLIGSESAYESFLSADDKASGR;VLS(1)PLRS(0.999)PPLIGS(0.001)ESAYESFLSADDKASGR;VLS(1)PLRS(1)PPLIGSESAYESFLSADDKASGR;VLS(1)PLRS(1)PPLIGSESAYESFLSADDKASGR;VLS(0.996)PLRS(0.918)PPLIGS(0.014)ES(0.041)AY(0.001)ES(0.025)FLS(0.004)ADDKASGR;VLS(1)PLRS(1)PPLIGSESAYESFLSADDKASGR;VLS(1)PLRS(1)PPLIGSESAYESFLSADDKASGR;VLS(1)PLRS(1)PPLIGSESAYESFLSADDKASGR;VLS(0.998)PLRS(0.999)PPLIGS(0.002)ESAYESFLSADDKASGR;VLS(1)PLRS(1)PPLIGSESAYESFLSADDKASGR;VLS(1)PLRS(1)PPLIGSESAYESFLSADDKASGR 167.64 2.3831000000000003e-10 7611292000.0 1114525.0 1380706.0 1351526.0 959260.7 1035974.0 967213.0 750879.2000000001 904657.0 1839512.0 993721.2 True False 1052700.076499496 1314374.8112780417 1438647.5284780592 1050428.5485157548 1117499.259914253 961176.2648975534 826785.3974107906 901518.9560155309 1505502.9911238886 984917.6032713947 1.0688204505665877 1.3345023044692854 1.4606780543870925 1.06651413785962 1.1346119271322692 0.9758951019912887 0.839446258920168 0.9153242393283905 1.5285572987256744 1.0 19.90964351035203 -5.375174000103678 8.120149319231661 1.0506964169225272 1.2921786672086442 0.20914027990275685 0.19663610924451821 0.43063456141679457 27.84025569059602 0.05643088107791584 0.08380815464996787 4.21527584546484e-06 5.375174000103678 0.24148225028611692 VLS(ph)PPGRR ddPTM_KYSE-520_SHP099_60min_R1 3 VLSPPGRR 8 1 H0YBI6;H0YBQ0;Q86VQ6 H0YBI6 TXNRD3 Thioredoxin reductase 3 1 VLS(1)PPGRR;VLS(1)PPGRR;VLS(1)PPGRR 84.81700000000001 0.0035486999999999997 534850000.0 604567.0 628594.0 583667.0 545372.0 573407.0 592043.0 508744.0 546744.0 658990.0 524924.0 True False 571030.463335564 598395.4007011699 621291.1087202193 597203.9909079297 618530.8686604607 588347.8400297995 560172.8083829664 544847.4726750087 539334.027786028 520273.5817446928 1.0975580605508786 1.150155267723766 1.194162322516498 1.1478652998394756 1.1888569598061667 1.1308431961062206 1.076688934511099 1.0472326325851669 1.0366354293397286 1.0 18.988910926987703 -6.948355133325333 1.5645777516753412 1.0243153762135544 1.1579669772846206 0.8178882030768522 0.026779399815053725 0.1690914335559903 0.8149716580782662 0.017869960300082886 0.009070071417576576 1.126276095733698e-07 6.948355133325333 0.13365160107106622 VLS(ph)PPHIK ddPTM_KYSE-520_SHP099_60min_R1 7 VLSPPHIK 8 0 A0A0D9SG79;Q9NZ09-2;Q9NZ09;Q9NZ09-3;Q9NZ09-4 A0A0D9SG79 UBAP1 Ubiquitin-associated protein 1 1 VLS(1)PPHIK;VLS(1)PPHIK;VLS(1)PPHIK;VLS(1)PPHIK;VLS(1)PPHIK;VLS(1)PPHIK;VLS(1)PPHIK 104.05 0.0020305999999999996 6680110000.0 4419550.0 4509360.0 3685230.0 3471580.0 3928340.0 5688820.0 4618980.0 6271850.0 7008620.0 6663610.0 True False 4174388.751345503 4292723.576912646 3922785.822376479 3801517.9194314177 4237478.008802886 5653313.964219373 5085911.575300656 6250094.416210789 5736031.280932506 6604575.599610136 0.6320449646441952 0.6499620622354665 0.5939497191322995 0.5755885237585621 0.6415973206594867 0.8559693017297106 0.7700588022038652 0.9463279391608037 0.8684935457883319 1.0 22.65503442829673 -6.567926877757645 1.0296098572995784 0.9360636789842791 0.6056839620575731 0.8573070230377443 0.055651393902145255 0.18928910277118277 0.41026174678662786 0.036434649804138845 0.024678570672805895 2.704413668408175e-07 6.567926877757645 -0.330379716926706 VLS(ph)PPK ddPTM_KYSE-520_SHP099_60min_R1 5 VLSPPK 6 0 Q9H6Z4-3;Q9H6Z4;B7Z7F3;Q9H6Z4-2;K7ESQ0;K7EL01;Q5XUX1;Q5XUX1-2 Q9H6Z4-3 RANBP3;FBXW9 Ran-binding protein 3;F-box/WD repeat-containing protein 9 1 VLS(1)PPK;VLS(1)PPK;VLS(1)PPK;VLS(1)PPK;VLS(1)PPK 76.47800000000001 0.030898000000000002 7324610000.0 5702680.0 6039970.0 4451980.0 4232060.0 4520810.0 6003960.0 4784950.0 5831380.0 6226700.0 6271900.0 True False 5386340.9723892575 5749800.775020194 4738961.754219852 4634273.70998477 4876572.027109712 5966487.05858412 5268659.442611762 5811152.3038343275 5096088.242333359 6216335.845464357 0.8664816551569215 0.9249501503712091 0.7623400459737957 0.7454992499103935 0.7844769247253299 0.9598077077732963 0.8475506429492463 0.9348195542031943 0.8197897232421303 1.0 22.567633018613108 -6.251617735819016 24.85844187206572 0.9042670686708805 0.8157796392607636 0.3250109686629057 0.06841057586820871 892.5841087149349 2259118.878024505 0.023543704415140882 0.023268709040828856 5.602505146858439e-07 6.251617735819016 -0.08848742941011689 VLS(ph)PPKLNEVSSDANR ddPTM_KYSE-520_SHP099_60min_R1 11 VLSPPKLNEVSSDANR 16 1 Q9H6Z4-3;Q9H6Z4;B7Z7F3;Q9H6Z4-2;K7ESQ0 Q9H6Z4-3 RANBP3 Ran-binding protein 3 1 VLS(1)PPKLNEVSSDANR;VLS(1)PPKLNEVSSDANR;VLS(1)PPKLNEVSSDANR;VLS(1)PPKLNEVSSDANR;VLS(0.995)PPKLNEVS(0.004)S(0.001)DANR;VLS(1)PPKLNEVSSDANR;VLS(0.89)PPKLNEVS(0.098)S(0.011)DANR;VLS(1)PPKLNEVSSDANR;VLS(1)PPKLNEVSSDANR;VLS(1)PPKLNEVSSDANR;VLS(1)PPKLNEVSSDANR 169.85 2.5611999999999998e-08 65670460000.0 8407110.0 9631690.0 6923800.0 5606840.0 6141130.0 8671370.0 6168390.0 7808670.0 10099120.0 8543360.0 True False 7940750.849141717 9168969.154938562 7370119.226471694 6139712.387842084 6624401.992750023 8617248.76334861 6791951.058885035 7781583.546327281 8265374.386097563 8467672.477033513 0.9377725544627592 1.0828204775051402 0.870383124342768 0.7250767438743705 0.7823167476915398 1.0176643920417074 0.8021036568557107 0.9189754997530809 0.976109362816685 1.0 23.013534037429988 -9.226023644356236 12.004190334992225 1.0000035208145583 0.8982061270616354 0.07294136711012145 0.10480098018056765 0.0 0.0 0.10807187271118844 0.02621127919685511 5.942598043638135e-10 9.226023644356236 -0.10179739375292296 VLS(ph)PTAAK ddPTM_KYSE-520_SHP099_60min_R1 4 VLSPTAAK 8 0 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 VLS(0.716)PT(0.284)AAK;VLS(0.777)PT(0.223)AAK;VLS(0.695)PT(0.305)AAK;VLS(0.732)PT(0.268)AAK 143.39 0.00055818 2203020000.0 4247710.0 4453130.0 3378460.0 3491470.0 3461530.0 5135400.0 4361770.0 6022600.0 5389800.0 6314700.0 True False 4012081.0587000465 4239194.950515596 3596240.937327123 3823298.2590512694 3733932.7175884577 5103348.0637200875 4802700.278372962 6001709.00628541 4411148.185801197 6258756.670762255 0.6410348364304462 0.6773222180563386 0.5745935057879692 0.6108718488628556 0.5965933673426709 0.8153932693310075 0.767356925826618 0.9589299156368163 0.7047962427438423 1.0 22.57744465729975 -6.350960674660909 3.392032628054811 0.8489293737744289 0.6194767145207083 0.6542521717023864 0.083413929611634 0.15835898059836148 3.4815838676547055 0.029437399469018556 0.025860085055453185 4.4569660437095156e-07 6.350960674660909 -0.2294526592537206 VLS(ph)PTAAKPSPFEGK ddPTM_KYSE-520_SHP099_60min_R1 6 VLSPTAAKPSPFEGK 15 1 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 VLS(0.5)PT(0.5)AAKPSPFEGK;VLS(0.857)PT(0.142)AAKPSPFEGK;VLS(0.997)PT(0.003)AAKPSPFEGK;VLS(0.985)PT(0.015)AAKPSPFEGK;VLS(0.987)PT(0.013)AAKPSPFEGK;VLS(0.98)PT(0.02)AAKPSPFEGK 237.86 7.1207e-19 22752760000.0 19289150.0 19908440.0 16531030.0 13999190.0 14505590.0 19430180.0 16360370.0 22096420.0 23760530.0 22226940.0 True False 18219142.397532787 18952008.65922232 17596646.6443832 15329668.808590038 15647097.407482816 19308909.039360687 18014235.86142431 22019772.676363226 19446216.706218224 22030026.60389763 0.8270140896838223 0.8602807885792232 0.7987573942044145 0.6958533951964387 0.7102623019399565 0.8764814217675291 0.8177128509793613 0.9995345476553991 0.8827141726092028 1.0 24.392967901478567 -7.019220519094197 1.6509386101330117 0.9597277640221155 0.7845813963021933 0.5754955205101406 0.06321068747588185 0.30349509048273243 1.6047347827724776 0.04407071155214771 0.021273466662349985 9.567081659975547e-08 7.019220519094197 -0.1751463677199222 VLS(ph)RNSADDEELTNDSLTLSQSK ddPTM_KYSE-520_SHP099_60min_R1 2 VLSRNSADDEELTNDSLTLSQSK 23 1 A0A0U1RRH6;O94880 A0A0U1RRH6 PHF14 PHD finger protein 14 1 VLS(0.591)RNS(0.409)ADDEELTNDSLTLSQSK;VLS(0.654)RNS(0.346)ADDEELTNDSLTLSQSK 173.95 7.3801e-11 634770000.0 663260.0 777350.0 657120.0 486240.0 570680.0 674090.0 521460.0 597810.0 814990.0 637700.0 True False 626467.6456239691 740004.9391738613 699479.0066291743 532452.1034066133 615589.2692749676 669882.7542690099 574174.2657591673 595736.3366399023 667008.3602260042 632050.474123093 0.9911671160331469 1.1708003861567295 1.106682195911065 0.8424202262411679 0.9739558697887797 1.0598564223820977 0.9084310340179348 0.9425455102560079 1.0553086937422391 1.0 19.269680247806644 -5.210443472463194 24.999897267147514 0.9680141800166732 1.0976750699542714 0.3604040555870769 0.07338853409258207 363.0966352981056 178001.494471879 0.019642289690575403 0.03402139286496435 6.15965697662679e-06 5.210443472463194 0.12966088993759828 VLS(ph)T(ph)T(ph)VKSSSK ddPTM_KYSE-520_SHP099_60min_R1 1 VLSTTVKSSSK 11 1 Q15772-1;Q15772 Q15772-1 SPEG Striated muscle preferentially expressed protein kinase 3 VLS(0.884)T(0.909)T(0.909)VKS(0.249)S(0.029)S(0.02)K 49.978 0.047379000000000004 0.0 536810.0 444550.0 484280.0 236280.0 548320.0 643330.0 317780.0 380460.0 454470.0 589990.0 True False 507032.0791957948 423193.15071684634 515497.46367539704 258735.98015982733 591469.6644859648 639314.7388388525 349904.30363392807 379140.2730600316 371949.7042563867 584763.1476052742 0.8670725596717164 0.7237001039650149 0.8815491635997678 0.44246286931624296 1.0114687748503906 1.0932883535102687 0.5983692800527161 0.6483655384452479 0.6360689892644527 1.0 19.157492868418007 -10.216798595775687 4.8124928596644265 1.0000158138797572 0.7678306173735224 0.12066713502017967 0.18873924114521715 265719796.0206112 8.916354567427325 116310.75453990484 0.04699749785973745 6.070177690363283e-11 10.216798595775687 -0.23218519650623481 VLS(ph)TSSTLTR ddPTM_KYSE-520_SHP099_60min_R1 3 VLSTSSTLTR 10 0 P16144-4;P16144-2;P16144-3;P16144;J3QRK0 P16144-4 ITGB4 Integrin beta-4 1 VLS(0.44)T(0.44)S(0.092)S(0.027)T(0.001)LTR;VLS(0.681)T(0.061)S(0.251)S(0.008)TLTR;VLS(0.92)T(0.077)S(0.003)S(0.001)TLTR 156.01 0.00010517 3303590000.0 2260950.0 2472600.0 1813170.0 2249280.0 2043760.0 2439490.0 1975150.0 2797290.0 3072530.0 2277230.0 True False 2135530.5964079183 2353812.584551734 1930049.8393745732 2463050.894929311 2204592.2845962844 2424264.2380271303 2174817.4376063724 2787586.853882395 2514636.004178219 2257055.513858133 0.9461577631989724 1.0428687155010237 0.8551184618739893 1.091267308139469 0.9767558976995786 1.074082681237723 0.9635639993137849 1.2350546261564432 1.1141223548727814 1.0 21.10601047238334 -7.240663027119306 24.790046196301635 1.1309413867412645 0.9957514391756189 0.3113401024804515 0.08329540010382568 730.6202983472599 871767.5691374736 0.037091944316092695 0.021383183891457245 5.7456209704706496e-08 7.240663027119306 -0.13518994756564562 VLS(ph)TSTDLEAAVADALK ddPTM_KYSE-520_SHP099_60min_R1 1 VLSTSTDLEAAVADALK 17 0 Q7Z460 Q7Z460 CLASP1 CLIP-associating protein 1 1 VLS(0.861)T(0.073)S(0.064)T(0.002)DLEAAVADALK 92.427 0.0015271 96848000.0 44802.0 56691.0 37074.0 28922.0 44428.0 47911.0 30657.0 48909.0 64308.0 57028.0 True False 42316.743749427194 53967.47926507417 39463.84936049736 31670.73818428361 47924.230839258955 47611.96967731691 33756.108743487115 48739.3460944464 52631.28827275661 56522.776287112654 0.7486671131381691 0.9547917283988562 0.6981937539663144 0.5603181631314282 0.8478746796835209 0.8423501604993272 0.5972125037174368 0.8622956849619418 0.9311518600114603 1.0 15.786544709292087 -7.634366592331906 3.118264413758011 0.9730577904482979 0.7546296198987966 0.3717111858130986 0.11224102251517182 0.2921072739494006 5.325937718784875 0.09728199697669974 0.030636499571911165 2.3207769781776203e-08 7.634366592331906 -0.21842817054950125 VLSAPPHFHFGQTNRT(ph)PEFLR ddPTM_KYSE-520_SHP099_60min_R1 1 VLSAPPHFHFGQTNRTPEFLR 21 1 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 1 VLSAPPHFHFGQT(0.299)NRT(0.701)PEFLR 145.19 2.3169e-06 948780000.0 247450.0 313670.0 295440.0 295760.0 271070.0 245440.0 289740.0 281660.0 303330.0 256090.0 True False 233723.45522065432 298600.82237173157 314484.53512071347 323868.94147651317 292401.6668226778 243908.1179186546 319029.7467898999 280682.9871999383 248252.91832703934 253821.24183500485 0.9208191305461543 1.176421721889752 1.2390000649557238 1.2759725668943123 1.1519984092298783 0.9609444668827434 1.2569072016332008 1.105829382800021 0.9780620271664057 1.0 17.953453285174746 -6.027699947118577 24.77238067147266 1.0767171424875435 1.1675020901708668 0.12056824001537536 0.11838390567102888 1508.033530499688 1348649.1154093128 0.040016399795235934 0.04012240303152151 9.382099897964602e-07 6.027699947118577 0.09078494768332335 VLSEDEEDVDFDIIHNANDTFTVK ddPTM_KYSE-520_SHP099_60min_R1 5 VLSEDEEDVDFDIIHNANDTFTVK 24 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 ;;;; 299.42 1.4559999999999997e-48 440352000.0 564198.0 419654.0 263389.0 416572.0 352389.0 332185.0 305952.0 390851.0 370446.0 281275.0 False True 532900.8122391714 399493.191926504 280367.47637730034 456162.8776330611 380120.0094808594 330111.7101972308 336880.6139637724 389495.22910630936 303182.34458371595 278783.1223286388 1.911524656829728 1.43298915870369 1.0056831060482703 1.6362643255545475 1.3634972099665392 1.1841165542585614 1.2083967320182547 1.3971262888976452 1.08752044259808 1.0 18.088783696798743 -4.324096569705767 3.4441071848429314 1.2634675594493812 1.95323883313353 0.54094512905969 0.1863678773249745 0.1958062632410705 3.910367989002299 0.0459423298714006 0.31605415213073024 4.7413654455236255e-05 4.324096569705767 0.6897712736841488 VLSGNCNHQEGT(ph)S(ph)SDDELPSAEMIDFQK ddPTM_KYSE-520_SHP099_60min_R1 1 VLSGNCNHQEGTSSDDELPSAEMIDFQK 28 0 P16383;P16383-2 P16383 GCFC2 GC-rich sequence DNA-binding factor 2 2 VLS(0.016)GNCNHQEGT(0.704)S(0.663)S(0.617)DDELPSAEMIDFQK 129.46 0.00011449 147540000.0 241500.0 241960.0 213410.0 271550.0 242900.0 241420.0 221690.0 223930.0 287260.0 236630.0 True False 228103.51358168555 230335.8784106354 227166.75006807313 297358.03035551566 262014.84808805276 239913.20822979804 244100.58868590064 223153.23909565478 235100.82523530629 234533.64229535405 0.9725833417724743 0.9821016556787521 0.9685891876526456 1.2678694086072535 1.1171738328187943 1.0229372890038069 1.0407913606632975 0.9514764573290188 1.002418343630369 1.0 17.839435357055724 -6.973011067793269 2.3901762477189004 0.9835405463053016 1.061300631565842 0.11660791022216666 0.08483462865330596 0.7033165082371776 8.04333288452185 0.0502932410340462 0.028231239790274292 1.0641158993790351e-07 6.973011067793269 0.07776008526054035 VLSGNCNHQEGTS(ph)S(ph)DDELPSAEMIDFQK ddPTM_KYSE-520_SHP099_60min_R1 1 VLSGNCNHQEGTSSDDELPSAEMIDFQK 28 0 P16383;P16383-2 P16383 GCFC2 GC-rich sequence DNA-binding factor 2 2 VLS(0.004)GNCNHQEGT(0.17)S(0.842)S(0.984)DDELPSAEMIDFQK 119.41 0.00018799 330000000.0 212380.0 206480.0 187180.0 245050.0 196590.0 183510.0 177910.0 165030.0 234370.0 191150.0 True False 200598.85803096608 196560.39086720126 199245.92229858902 268339.47832303104 212060.51455590874 182364.64602042187 195894.87903427603 164457.54944829136 191814.31598690603 189456.5597124498 1.0588118898360006 1.0374958310524238 1.0516707502817384 1.4163641455872884 1.1193094336652498 0.9625670723526715 1.0339830900107028 0.8680488535097386 1.0124448384264697 1.0 17.531507566781638 -6.228974854551492 5.808563150062411 0.970551649127231 1.1430631389634653 0.3535079154714492 0.10901071401487139 0.22964617971142753 23.844576903034643 0.039159447106608715 0.038317235358191766 5.9023525352918e-07 6.228974854551492 0.17251148983623432 VLSKPPEGVVSEVEMLS(ph)SQER ddPTM_KYSE-520_SHP099_60min_R1 2 VLSKPPEGVVSEVEMLSSQER 21 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VLSKPPEGVVSEVEMLS(0.5)S(0.5)QER;VLSKPPEGVVSEVEMLS(0.639)S(0.361)QER 223.15 1.9603e-19 3402410000.0 1386070.0 1631720.0 1355600.0 1310720.0 1422910.0 1473760.0 1302970.0 1474930.0 1632840.0 1525220.0 True False 1309181.9340379592 1553329.7219383458 1442984.1450366871 1435290.4347176617 1534884.9217495718 1464561.7171764849 1434686.9233617582 1469813.8120812506 1336357.4165467427 1511707.737403203 0.8660284667768251 1.0275330895683847 0.9545391012653223 0.9494496847540053 1.0153317891897427 0.9688127413386762 0.9490504598635247 0.9722870206420208 0.8840051443027768 1.0 20.527747815658703 -4.237164190215015 24.002689173711016 0.9678905567744857 0.8660282577360476 0.3922427327988105 0.03843063673930136 4402.573628807917 4353040.937315612 0.009274797680621234 0.543334247186009 5.792096778928384e-05 4.237164190215015 -0.10186229903843802 VLSKPPEGVVSEVEMLSS(ph)QER ddPTM_KYSE-520_SHP099_60min_R1 14 VLSKPPEGVVSEVEMLSSQER 21 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VLSKPPEGVVSEVEMLS(0.062)S(0.938)QER;VLSKPPEGVVS(0.001)EVEMLS(0.084)S(0.915)QER;VLSKPPEGVVSEVEMLS(0.044)S(0.956)QER;VLSKPPEGVVSEVEMLS(0.032)S(0.968)QER;VLSKPPEGVVSEVEMLS(0.154)S(0.846)QER;VLSKPPEGVVSEVEMLS(0.008)S(0.992)QER;VLSKPPEGVVSEVEMLS(0.034)S(0.966)QER;VLSKPPEGVVSEVEMLS(0.042)S(0.958)QER;VLSKPPEGVVSEVEMLS(0.004)S(0.996)QER;VLSKPPEGVVSEVEMLS(0.023)S(0.977)QER;VLSKPPEGVVSEVEMLS(0.037)S(0.963)QER;VLSKPPEGVVSEVEMLS(0.027)S(0.973)QER;VLSKPPEGVVSEVEMLS(0.143)S(0.857)QER;VLSKPPEGVVSEVEMLS(0.048)S(0.952)QER 259.71 1.3023e-35 7723784000.0 5201440.0 5905181.0 4983699.0 4873684.0 5361650.0 5603699.0 4937913.0 5408560.0 6560300.0 5563069.0 True False 4912905.75438643 5621487.240902614 5304956.211740339 5336877.4620334795 5783581.351384545 5568724.235954398 5437085.435426784 5389798.967727398 5369114.891705002 5513784.536662193 0.8910224405251226 1.0195333538197378 0.9621261361351147 0.9679154900862692 1.048931330727275 1.0099640635079048 0.9860895722846218 0.9775135266693155 0.973762187478445 1.0 22.394611461271044 -4.252226915369217 24.56333152517817 0.9934389719542374 0.8910223717381794 0.5983215161160659 0.025304538590653427 721.7473171888042 1924354.6244511213 0.006623233190002702 0.07985877826690048 5.594652090493206e-05 4.252226915369217 -0.10241660021605792 VLSNRGDS(ph)LSR ddPTM_KYSE-520_SHP099_60min_R1 1 VLSNRGDSLSR 11 1 Q15642;M0R0F9;W4VSQ9;Q15642-4;Q15642-2;Q15642-3 Q15642 TRIP10 Cdc42-interacting protein 4 1 VLSNRGDS(0.921)LS(0.079)R 99.796 0.0010804999999999999 416210000.0 185580.0 177310.0 177990.0 141580.0 112050.0 152870.0 101710.0 84774.0 204140.0 107000.0 True False 175285.50745544155 168791.76145226415 189463.5201940694 155035.72063242088 120867.69752271 151915.88162575275 111991.83939394195 84479.93878040045 167073.3219506211 106052.06324474042 1.6528250567924214 1.591593376761911 1.7865142308154547 1.4618831156036918 1.1397015185247172 1.43246512116573 1.0560081149528802 0.7965892995918699 1.5753896420200668 1.0 16.6944131632355 -5.595602991190237 3.136080400472861 1.162426336085835 1.6678324036762355 0.5473892241951561 0.20954710562087245 0.19192660582435075 3.811662096996607 0.06396294932796744 0.0875552053368246 2.537447169213399e-06 5.595602991190237 0.5054060675904006 VLSPLRS(ph)PPLIGSESAYESFLSADDK ddPTM_KYSE-520_SHP099_60min_R1 9 VLSPLRSPPLIGSESAYESFLSADDK 26 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(0.004)PLRS(0.995)PPLIGS(0.001)ESAYESFLSADDK;VLS(0.007)PLRS(0.992)PPLIGS(0.001)ESAYESFLSADDK;VLS(0.207)PLRS(0.793)PPLIGSESAYESFLSADDK;VLS(0.001)PLRS(0.919)PPLIGS(0.079)ESAYESFLSADDK;VLS(0.001)PLRS(0.999)PPLIGSESAYESFLSADDK;VLS(0.001)PLRS(0.998)PPLIGS(0.001)ESAYESFLSADDK;VLS(0.059)PLRS(0.929)PPLIGS(0.011)ESAYESFLSADDK;VLS(0.387)PLRS(0.611)PPLIGS(0.001)ES(0.001)AYESFLSADDK;VLS(0.033)PLRS(0.967)PPLIGS(0.001)ESAYESFLSADDK 240.52 3.4668e-29 22228536000.0 4851973.0 5870510.0 4384110.0 3944195.0 4024444.0 5110601.0 3661430.0 4809463.0 5594376.0 4805408.0 True False 4582824.385521618 5588481.887784839 4666716.745424017 4319050.106934533 4341144.846845918 5078703.843477814 4031563.0765132336 4792780.095390104 4578578.341142482 4762835.823670849 0.9622049877817347 1.1733517792090598 0.9798189394290836 0.9068232176866685 0.9114622060392747 1.0663193172095353 0.846462743157499 1.00628706779487 0.9613134927698694 1.0 22.183389388767637 -4.977758350698986 24.685689598171304 0.954352976601651 1.0699802415113806 0.2558730083577212 0.07443513254172085 235.48527327472263 261358.02827755202 0.01822788309662497 0.03793989269140966 1.0525473673019173e-05 4.977758350698986 0.11562726490972963 VLSPLRS(ph)PPLIGSESAYESFLSADDKASGR ddPTM_KYSE-520_SHP099_60min_R1 2 VLSPLRSPPLIGSESAYESFLSADDKASGR 30 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VLS(0.012)PLRS(0.983)PPLIGS(0.004)ES(0.001)AYESFLSADDKASGR;VLS(0.002)PLRS(0.998)PPLIGSESAYESFLSADDKASGR 210.33 2.0368000000000002e-22 1936810000.0 681797.0 853290.0 748121.0 475016.0 457383.0 441533.0 361070.0 373563.0 1029650.0 467423.0 True False 643976.3612813759 812296.6675855971 796346.0766959229 520161.37782123237 493376.43994671735 438777.22876864986 397570.4793036137 372267.19714325975 842691.5153642441 463281.9958695912 1.3900310545688639 1.7533525473203362 1.7189229967833362 1.1227748594997249 1.0649592350780612 0.9471061527980484 0.8581608671352846 0.8035434151601455 1.8189602075567222 1.0 18.82153109167879 -5.310668707932064 5.641610453551574 1.059907462403797 1.6341681735179354 0.4305009579146245 0.2797366495864362 0.17936553288258378 13.72685447566817 0.07867567630497278 0.11968643350502198 4.8902525934255645e-06 5.310668707932064 0.5742607111141385 VLSPT(ph)AAK ddPTM_KYSE-520_SHP099_60min_R1 1 VLSPTAAK 8 0 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 VLS(0.248)PT(0.752)AAK 126.31 0.0040722 370850000.0 730520.0 778410.0 588700.0 631340.0 576010.0 865390.0 769720.0 1025400.0 916090.0 1082000.0 True False 689996.5993444832 741014.0151827686 626648.5439533044 691342.363780707 621338.7099514174 859988.7800098796 847530.8093432792 1021843.1267301601 749751.1487496047 1072414.3217832623 0.6434048719128662 0.6909773584061939 0.5843343670674623 0.6446597641768804 0.5793830773522545 0.801918402749274 0.7903016512628851 0.9528436034227797 0.6991245207382929 1.0 20.032430960661166 -6.430598533212871 3.0537485567719624 0.8542749133465801 0.630492302531592 0.6393747096647722 0.08316151318920886 0.16999599123086506 3.057135933618167 0.030373293055448163 0.025556169092332236 3.710235417110669e-07 6.430598533212871 -0.22378261081498807 VLSPT(ph)AAKPSPFEGK ddPTM_KYSE-520_SHP099_60min_R1 2 VLSPTAAKPSPFEGK 15 1 Q96QC0 Q96QC0 PPP1R10 Serine/threonine-protein phosphatase 1 regulatory subunit 10 1 VLS(0.192)PT(0.808)AAKPSPFEGK;VLS(0.434)PT(0.566)AAKPSPFEGK 135.09 4.0855e-05 2102200000.0 2794190.0 2914990.0 2375810.0 2016610.0 2163810.0 2843750.0 2338350.0 3154540.0 3379110.0 3083020.0 True False 2639190.7106203316 2774949.5049108076 2528958.514030404 2208268.0080840955 2334089.5366052235 2826001.101414498 2574733.238096787 3143597.63701517 2765548.80443109 3055706.8413532646 0.8636923787661277 0.9081203299207461 0.8276181732506831 0.7226701129176815 0.7638460290161663 0.9248272979494858 0.8425982503467279 1.0287628363010706 0.9050438893563253 1.0 21.543074709944843 -6.9586669608535265 1.5839139817862946 0.9752666037675881 0.8233693954383592 0.4801654737586468 0.06552516674329713 0.37011673257777217 1.8252134759212748 0.04483137462432837 0.02261499071137447 1.099848936354512e-07 6.9586669608535265 -0.15189720832922893 VLSSAAS(ph)LPGSELPSSRPEGSQGGELSR ddPTM_KYSE-520_SHP099_60min_R1 3 VLSSAASLPGSELPSSRPEGSQGGELSR 28 1 O15027;O15027-5;A0A0C4DH09;Q8N9G1 O15027 SEC16A Protein transport protein Sec16A 1 VLSSAAS(1)LPGSELPSSRPEGSQGGELSR;VLSSAAS(0.999)LPGS(0.001)ELPSSRPEGSQGGELSR;VLSS(0.001)AAS(0.999)LPGS(0.001)ELPSSRPEGSQGGELSR 160.86 3.6849e-10 4421200000.0 751130.0 694620.0 578117.0 509022.0 497258.0 714570.0 559116.0 746229.0 784129.0 796400.0 True False 709463.3215594676 661249.4125541243 615383.3468399056 557399.2978369546 536389.3755890033 710110.1035737165 615636.9017263125 743640.5057701577 641750.9398835031 789344.5155898243 0.8988005966309061 0.8377196515516635 0.7796131279636127 0.7061546470877136 0.6795377240167374 0.8996199879125008 0.7799343500426911 0.9420987808023027 0.813017544568566 1.0 19.59029558766749 -7.255314376217522 24.81409290968804 0.9081686240628595 0.7941071274671951 0.32218741172474796 0.07994151453187127 575.3179750233285 2330785.6367773 0.04011865659074389 0.022424173385026017 5.555019960244707e-08 7.255314376217522 -0.11406149659566434 VLSSAASLPGSELPSSRPEGS(ph)QGGELSR ddPTM_KYSE-520_SHP099_60min_R1 3 VLSSAASLPGSELPSSRPEGSQGGELSR 28 1 O15027;O15027-5;A0A0C4DH09;Q8N9G1 O15027 SEC16A Protein transport protein Sec16A 1 VLSSAASLPGSELPSSRPEGS(1)QGGELSR;VLSSAASLPGSELPS(0.001)S(0.001)RPEGS(0.906)QGGELS(0.093)R;VLSSAASLPGSELPSSRPEGS(1)QGGELSR 199.29 7.7778e-16 2056210000.0 266544.0 267333.0 221098.0 195533.0 187250.0 213839.0 183075.0 211739.0 280161.0 222026.0 True False 251758.27297770907 254489.92140498615 235350.33084930768 214116.3975308597 201985.50969323918 212504.35148145058 201582.0076398184 211004.52682925403 229290.8246840794 220059.02237361396 1.144048856812044 1.1564621103010981 1.0694873053181717 0.9729953138087429 0.9178697038393192 0.9656697970813615 0.9160360955233843 0.9588542408000554 1.0419514828834955 1.0 17.74753099757499 -5.067733207028207 2.4277737674365527 0.9606445021775564 1.15117432970033 0.8160246460608193 0.0351506269379734 0.11473794660564117 1.3251641949873942 0.010350259434796115 0.0231384089558349 8.555921533027632e-06 5.067733207028207 0.1905298275227737 VLSSAASLPGSELPSSRPEGSQGGELS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 VLSSAASLPGSELPSSRPEGSQGGELSR 28 1 O15027;O15027-5;A0A0C4DH09;Q8N9G1 O15027 SEC16A Protein transport protein Sec16A 1 VLSSAASLPGSELPS(0.002)S(0.002)RPEGS(0.143)QGGELS(0.853)R;VLSSAASLPGSELPSSRPEGSQGGELS(1)R;VLSSAASLPGSELPSSRPEGS(0.009)QGGELS(0.991)R 266.81 2.994199999999999e-41 3146050000.0 447070.0 398517.0 411066.0 394777.0 380239.0 369574.0 359158.0 423640.0 562040.0 471910.0 True False 422270.13588805014 379371.6451337876 437563.97208885464 432296.48738596647 410161.64603603503 367267.35157948564 395465.19568429195 422170.4917183192 459987.7038754142 467729.24454042414 0.9028089237887174 0.8110924205873552 0.9355069780141523 0.9242451534342849 0.8769211051557121 0.7852135735928825 0.8455002553301183 0.9025958856456163 0.9834486708809141 1.0 18.83531410980994 -7.707899300318422 3.009196835508026 0.9990374538539137 0.8685167330065577 0.5452669998338111 0.04437514385905115 0.20703354054185427 3.5105240257937798 0.04247710520204447 0.012544069251591072 1.9592989226700767e-08 7.707899300318422 -0.130520720847356 VLST(ph)STDLEAAVADALK ddPTM_KYSE-520_SHP099_60min_R1 1 VLSTSTDLEAAVADALK 17 0 Q7Z460 Q7Z460 CLASP1 CLIP-associating protein 1 1 VLS(0.064)T(0.462)S(0.462)T(0.012)DLEAAVADALK 137.61 6.4042e-05 68617000.0 37111.0 38524.0 38921.0 26593.0 25286.0 26808.0 30453.0 37821.0 33913.0 33811.0 True False 35052.37885105561 36673.249214297095 41429.909935801814 29120.39072452301 27275.864342340436 26640.681328077306 33531.48643263898 37689.80777848777 27755.254077159836 33511.460844559966 1.0459818213727854 1.0943494640356866 1.2362907761010746 0.8689681079435911 0.8139264494871528 0.7949722470067127 1.000597574309634 1.1246841178696656 0.8282316967887553 1.0 15.032366957982758 -5.2728881579007245 24.96535551635763 0.9178467027307377 1.12242156780214 0.4442106926178768 0.10596857912348173 702.2356141221101 1531303.3011440733 0.032191009620313835 0.048210934491405004 5.3347226075034945e-06 5.2728881579007245 0.20457486507140243 VLSTS(ph)TDLEAAVADALK ddPTM_KYSE-520_SHP099_60min_R1 8 VLSTSTDLEAAVADALK 17 0 Q7Z460 Q7Z460 CLASP1 CLIP-associating protein 1 1 VLS(0.016)T(0.113)S(0.825)T(0.046)DLEAAVADALK;VLST(0.048)S(0.95)T(0.002)DLEAAVADALK;VLS(0.021)T(0.15)S(0.827)T(0.003)DLEAAVADALK;VLST(0.01)S(0.984)T(0.006)DLEAAVADALK;VLS(0.001)T(0.004)S(0.993)T(0.002)DLEAAVADALK;VLS(0.001)T(0.006)S(0.949)T(0.043)DLEAAVADALK;VLS(0.016)T(0.137)S(0.709)T(0.137)DLEAAVADALK;VLST(0.003)S(0.972)T(0.025)DLEAAVADALK 302.96 2.6667e-38 1265679000.0 1497608.0 1679929.0 1335066.0 1076529.0 1199195.0 1801578.0 1133739.0 1534387.0 1938646.0 1622149.0 True False 1414532.6988324667 1599222.689215162 1421126.4905411256 1178841.992489755 1293564.8240138006 1790333.6834405735 1248348.402346361 1529064.5696256172 1586636.7556886617 1607778.0218728269 0.8798059679810416 0.9946787849185181 0.883907150867581 0.7332119088906166 0.8045668036356077 1.1135453147662113 0.7764432560735077 0.9510420896564316 0.9868506311838131 1.0 20.616636803670804 VLSTS(ph)TDLEAAVADALKKPVR ddPTM_KYSE-520_SHP099_60min_R1 2 VLSTSTDLEAAVADALKKPVR 21 2 Q7Z460 Q7Z460 CLASP1 CLIP-associating protein 1 1 VLS(0.018)T(0.113)S(0.727)T(0.142)DLEAAVADALKKPVR;VLST(0.002)S(0.881)T(0.117)DLEAAVADALKKPVR 244.01 8.5241e-27 1172550000.0 455419.0 474207.0 484155.0 360213.0 386232.0 404521.0 257943.0 283969.0 635330.0 308291.0 True False 430156.0002147316 451425.3839207813 515364.4059753891 394447.5352180129 416626.26104053005 401996.2343895538 284018.39572108485 282983.9778178631 519970.0873659642 305559.7815867689 1.407763803144955 1.4773717325511027 1.6866238197288492 1.2909013521663446 1.363485269157459 1.3156058441395373 0.9295018940194948 0.9261165731574035 1.701696750356885 1.0 18.22109513978789 -6.009556162440674 1.3836512895620818 1.1455040761234092 1.501573251220233 0.28630043725340604 0.22736857466551585 0.5321662146776718 2.0982326803624067 0.09613803371766208 0.10725557181080368 9.782364422430085e-07 6.009556162440674 0.3560691750968239 VLSTST(ph)DLEAAVADALK ddPTM_KYSE-520_SHP099_60min_R1 1 VLSTSTDLEAAVADALK 17 0 Q7Z460 Q7Z460 CLASP1 CLIP-associating protein 1 1 VLS(0.004)T(0.039)S(0.383)T(0.574)DLEAAVADALK 73.848 0.067099 531100000.0 116610.0 115960.0 106840.0 83688.0 89852.0 126990.0 97874.0 118510.0 134760.0 117130.0 True False 110141.41084372821 110389.10754049143 113727.077350044 91641.68235828538 96922.84121205298 126197.40830545139 107768.05907818975 118098.91647044187 110290.98102314916 116092.319325761 0.9487398605127852 0.9508734788107208 0.9796261975860779 0.7893862650907518 0.8348772922701503 1.0870435618685075 0.9282962017132852 1.017284495273544 0.9500282332517366 1.0 16.824913001014256 -6.250939194225916 24.998862350673065 0.9933461386185372 0.901688627361249 0.3460158383536124 0.06579306837939558 939.4618400442658 2236674.412286517 0.023015066660097488 0.02279130719961719 5.611265341220606e-07 6.250939194225916 -0.09165751125728816 VLT(ph)LSDDLER ddPTM_KYSE-520_SHP099_60min_R1 1 VLTLSDDLER 10 0 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 1 VLT(0.704)LS(0.296)DDLER 100.31 0.009912 83850000.0 80624.0 73784.0 67628.0 58538.0 64586.0 63413.0 52872.0 66063.0 75937.0 63079.0 True False 76151.62600004063 70239.30588795812 71987.4090886259 64101.43391990855 69668.55075592829 63017.215945141965 58216.81774099393 65833.8428722201 62148.75501599054 62520.169134719355 1.218032949270307 1.1234663447023865 1.151426972846257 1.0252920746548504 1.1143372086183179 1.0079501833936433 0.9311685900200861 1.0530016758329683 0.9940592912036356 1.0 15.93203406078995 -4.769868071215769 0.5336299330401009 0.9921609893379141 1.279480650546841 0.7218122522828767 0.04374444218638281 1.4074518983181619 0.4479580645200335 0.027960406575202705 0.23651209620590044 1.6987596186169804e-05 4.769868071215769 0.28731966120892694 VLT(ph)PEEQLADK ddPTM_KYSE-520_SHP099_60min_R1 6 VLTPEEQLADK 11 0 O75822-3;O75822;O75822-2 O75822-3 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 VLT(1)PEEQLADK;VLT(1)PEEQLADK;VLT(1)PEEQLADK;VLT(1)PEEQLADK;VLT(1)PEEQLADK;VLT(1)PEEQLADK 211.82 6.1423e-09 2394630000.0 4588060.0 5218060.0 3772020.0 3619070.0 3830470.0 5333210.0 4321080.0 5287600.0 5261720.0 5296280.0 True False 4333551.16572914 4967376.565132254 4015170.444645393 3963025.3246869296 4131906.1966070076 5299923.458136193 4757896.936076832 5269258.549735117 4306324.2851671465 5249359.079643486 0.8255390991510255 0.9462824870173706 0.7648877479568584 0.7549541314586696 0.7871258441111689 1.0096324861236472 0.9063767335954408 1.0037908380413143 0.820352393469645 1.0 22.323709857042864 -6.251962262844383 24.989612462538762 0.9456640587340605 0.8168051239124267 0.45709286643271807 0.07205003778197815 662.609705642157 1747194.647119962 0.024235760305599614 0.023941087403138016 5.598062426323367e-07 6.251962262844383 -0.1288589348216338 VLT(ph)PEEQLADKLR ddPTM_KYSE-520_SHP099_60min_R1 6 VLTPEEQLADKLR 13 1 O75822-3;O75822;O75822-2 O75822-3 EIF3J Eukaryotic translation initiation factor 3 subunit J 1 VLT(1)PEEQLADKLR;VLT(1)PEEQLADKLR;VLT(1)PEEQLADKLR;VLT(1)PEEQLADKLR;VLT(1)PEEQLADKLR;VLT(1)PEEQLADKLR 212.72 9.2702e-11 5235140000.0 3376850.0 4022290.0 2965340.0 2374490.0 2533900.0 3272600.0 2342820.0 2871050.0 4163490.0 3320070.0 True False 3189529.3989164173 3829053.1508196183 3156490.561111751 2600160.8156835465 2733303.514081171 3252174.4894906706 2579655.109319783 2861090.9976581098 3407505.169041793 3290656.762775372 0.969268334211295 1.1636136573509288 0.9592281385341255 0.7901647005841307 0.8306255289220369 0.9883055948830577 0.783933207042863 0.8694589572584404 1.0355091444322713 1.0 21.6499441210169 -4.986338970949843 13.139423940199515 0.8890636829557517 1.065237592400998 0.32993409710649235 0.09333963047817274 0.9327359124350258 888.5633159778808 0.023726136688459097 0.04886404397392218 1.0319556402130604e-05 4.986338970949843 0.17617390944524636 VLT(ph)PELYAELR ddPTM_KYSE-520_SHP099_60min_R1 7 VLTPELYAELR 11 0 P12277;G3V4N7;G3V461 P12277 CKB Creatine kinase B-type 1 VLT(1)PELYAELR;VLT(1)PELYAELR;VLT(1)PELYAELR;VLT(1)PELYAELR;VLT(1)PELYAELR;VLT(1)PELYAELR;VLT(1)PELYAELR 235.31 1.9212999999999999e-13 960193000.0 815055.0 1020025.0 742966.0 883843.0 705221.0 864132.0 711914.0 836607.0 966934.0 817885.0 True False 769842.2743781388 971021.4679112606 790858.7771476313 967843.1729829129 760717.8805413936 858738.6316545095 783881.2147310855 833705.0055825418 791363.1600225419 810639.1752049006 0.9496731689330833 1.197846708636825 0.9755990104323918 1.1939259816036856 0.9384173671955978 1.0593352232668143 0.9669915280530926 1.0284538806945902 0.9762212143553433 1.0 19.62870037164264 -5.788704651714405 24.999905358265817 0.9981519392637795 1.0803273585018602 0.20885279822452218 0.08027403607596444 331.72101071853893 304157.714137095 0.0226734977727656 0.02571540298310215 1.6266546098327206e-06 5.788704651714405 0.0821754192380807 VLT(ph)PPQAAGDGILATTANQR ddPTM_KYSE-520_SHP099_60min_R1 1 VLTPPQAAGDGILATTANQR 20 0 Q96QT6-4;Q96QT6;K7EPF7;C9J9G2;Q96QT6-2;Q96QT6-5;Q96QT6-3 Q96QT6-4 PHF12 PHD finger protein 12 1 VLT(1)PPQAAGDGILATTANQR 91.589 0.007305 107430000.0 60714.0 55120.0 38068.0 60737.0 61081.0 54952.0 48643.0 60889.0 84920.0 60420.0 True False 57346.073389641584 52471.95246319322 40521.92419095359 66509.42621875505 65887.7271966502 54609.02418459061 53560.309149931345 60677.790270599464 69500.66865899257 59884.725806048715 0.957607680719301 0.8762159591936086 0.6766654375640581 1.1106242088201597 1.1002426129501481 0.9119023832797574 0.8943901542339772 1.013243184365898 1.1605742152696403 1.0 15.869900455787567 -5.2766631466745855 24.97025545122808 1.0205295233677822 0.8407683011094532 0.4213476865717174 0.10203286237135274 831.6514544297316 1364085.5589092954 0.030556689851749464 0.045514574215170064 5.288552905859899e-06 5.2766631466745855 -0.17976122225832902 VLTANS(ph)NPSS(ph)PSAAK ddPTM_KYSE-520_SHP099_60min_R1 1 VLTANSNPSSPSAAK 15 0 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 2 VLTANS(0.984)NPS(0.274)S(0.741)PS(0.001)AAK 128.74 6.0919e-05 640910000.0 1400100.0 1142400.0 1030800.0 1029700.0 1112100.0 980240.0 1023100.0 995200.0 1216500.0 998190.0 True False 1322433.6619698452 1087517.389222642 1097247.0173383139 1127562.3784094057 1199615.9430165642 974121.9585584335 1126524.9324937768 991747.883481427 995614.2654694344 989346.8131800685 1.336673494423186 1.0992276669159349 1.1090620626870171 1.1397038565122268 1.2125332866445744 0.984611205677514 1.1386552394834881 1.0024269247844855 1.00633493958425 1.0 19.916116817410337 -1.0000000000000029 0.21469989582448545 0.9892299741431944 2.3640157348110913 0.5539662373589382 0.07110541981097758 42.12126770292408 0.5307467153602021 0.11630552217237085 19.918456542290905 0.09999999999999934 1.0000000000000029 1.3747857606678968 VLTANSNPS(ph)SPSAAK ddPTM_KYSE-520_SHP099_60min_R1 1 VLTANSNPSSPSAAK 15 0 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANSNPS(0.721)S(0.278)PS(0.001)AAK 207.21 1.4278e-12 2583200000.0 1356600.0 1511300.0 1096900.0 885830.0 976310.0 1383700.0 994020.0 1240800.0 1508300.0 1349100.0 True False 1281346.6936849472 1438694.879492453 1167607.929102055 970019.0168654979 1053140.0425559767 1375063.8150425446 1094505.2423003258 1236495.9544048985 1234430.7411488276 1337148.0235839179 0.958268397428874 1.0759428680426586 0.8732076841968105 0.7254387694980732 0.7876016895521237 1.0283557173849776 0.8185370826535391 0.9247263074814673 0.9231818163558435 1.0 20.35072775133716 -4.7760643769476925 24.964073478297045 0.8759930733666724 1.0171056194346673 0.24480837634824526 0.09160023668050372 267.0105367040749 455773.8222039808 0.024524193230706866 0.05140608680479745 1.6746946119499374e-05 4.7760643769476925 0.14111254606799484 VLTANSNPSS(ph)PSAAK ddPTM_KYSE-520_SHP099_60min_R1 4 VLTANSNPSSPSAAK 15 0 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANS(0.004)NPS(0.201)S(0.788)PS(0.007)AAK;VLTANSNPSS(1)PSAAK;VLTANSNPS(0.002)S(0.997)PS(0.002)AAK;VLTANSNPS(0.258)S(0.739)PS(0.003)AAK 377.63 1.8972999999999997e-68 11554500000.0 12163700.0 14610000.0 10246100.0 8902500.0 9343800.0 13843900.0 10201900.0 12472400.0 13704800.0 14029200.0 True False 11488955.313265208 13908113.669942899 10906580.000339633 9748590.923365766 10079103.901050417 13757495.08496603 11233207.612949116 12429136.155480035 11216353.78989356 13904912.202552436 0.8262515538326272 1.0002302400291225 0.7843688504798744 0.7010897142936494 0.7248592263099842 0.9893981986049977 0.8078589385761895 0.8938665684777569 0.8066468616633656 1.0 23.729091299558338 -6.2539571831929575 24.987497858714782 0.8871898261297644 0.8108937599788759 0.1812650647023324 0.09604396812301641 1336.3830314192362 4462978.266859595 0.033941960760681386 0.03332015249512878 5.572406842160525e-07 6.2539571831929575 -0.07629606615088846 VLTANSNPSS(ph)PSAAKR ddPTM_KYSE-520_SHP099_60min_R1 1 VLTANSNPSSPSAAKR 16 1 Q9NV56 Q9NV56 MRGBP MRG/MORF4L-binding protein 1 VLTANSNPS(0.165)S(0.834)PS(0.001)AAKR 216.71 6.942999999999999e-18 439190000.0 1260800.0 1411600.0 1160000.0 796850.0 885210.0 1174600.0 805700.0 931450.0 1516800.0 1214800.0 True False 1190860.9106575113 1343784.6171452026 1234775.4560656247 872582.3844183122 954870.990844072 1167268.8857042536 887148.0188742412 928219.0173520643 1241387.355416391 1204037.8171000972 0.9890560692899811 1.116065125248045 1.0255287986215902 0.7247134367589141 0.7930573087345887 0.969461979620872 0.7368107598239072 0.7709218133925915 1.031020236894427 1.0 20.199449275114446 -5.119858839387436 6.7449149418239935 0.848252068163342 1.0567181161170678 0.37398007558225854 0.10772271070467113 0.22768753772715702 11.627849625747304 0.028661568662381974 0.050200565537051385 7.588241788523079e-06 5.119858839387436 0.2084660479537258 VLTLS(ph)DDLER ddPTM_KYSE-520_SHP099_60min_R1 2 VLTLSDDLER 10 0 P55010 P55010 EIF5 Eukaryotic translation initiation factor 5 1 VLT(0.102)LS(0.898)DDLER;VLT(0.268)LS(0.732)DDLER 139.52 0.00024987 72113000.0 340560.0 328894.0 292071.0 259297.0 301218.0 306647.0 252489.0 302427.0 352271.0 318052.0 True False 321668.45791047125 313093.4385600411 310898.3639901227 283940.50891951437 324922.1429040223 304733.1023280705 278013.05217517435 301377.95132399246 288307.4664292502 315234.3067207117 1.0204106946883165 0.9932086447603327 0.9862453335879127 0.9007284513962412 1.0307321759617165 0.9666876219727412 0.8819251149002818 0.9560442658006904 0.9145815042418023 1.0 18.266065025228997 -6.534865217984265 24.98811797001487 0.9330221093551118 0.9835789101141612 0.21298057297830109 0.04302448980545625 334.3039308830274 696914.623017559 0.01599980049262281 0.012402725436246613 2.9183325694093724e-07 6.534865217984265 0.05055680075904945 VLTLSERPLDFLDLERPPT(ph)TPQNEEIR ddPTM_KYSE-520_SHP099_60min_R1 3 VLTLSERPLDFLDLERPPTTPQNEEIR 27 2 Q9GZY8-5;C9JHF5;A0A0A0MS29;Q9GZY8-4;Q9GZY8-3;Q9GZY8-2;Q9GZY8 Q9GZY8-5 MFF Mitochondrial fission factor 1 VLTLSERPLDFLDLERPPT(0.573)T(0.427)PQNEEIR;VLTLSERPLDFLDLERPPT(0.5)T(0.5)PQNEEIR;VLTLSERPLDFLDLERPPT(0.572)T(0.428)PQNEEIR 123.73 0.00017169 2268550000.0 235919.0 283884.0 240785.0 252638.0 233086.0 345533.0 301308.0 314807.0 493380.0 344018.0 True False 222832.1027771331 270245.78652142896 256306.38636962144 276648.63956161554 251428.54212207437 343376.40037804126 331767.1531227001 313715.00799350615 403794.6290976652 340970.2681619538 0.6535235578701323 0.7925787429450237 0.7516971721648212 0.811357075362985 0.7373913962570222 1.0070567214820754 0.9730090395011146 0.9200655813324405 1.1842517275021502 1.0 18.379286419418282 -6.346158889439189 0.9968568981446319 1.0444300646921194 0.733056751614578 0.7354529687833326 0.07863159402431555 0.2787209644330821 0.5813238082621162 0.0456651674167529 0.03824406619462662 4.506518005079246e-07 6.346158889439189 -0.31137331307754146 VLTLSERPLDFLDLERPPTT(ph)PQNEEIR ddPTM_KYSE-520_SHP099_60min_R1 2 VLTLSERPLDFLDLERPPTTPQNEEIR 27 2 Q9GZY8-5;C9JHF5;A0A0A0MS29;Q9GZY8-4;Q9GZY8-3;Q9GZY8-2;Q9GZY8 Q9GZY8-5 MFF Mitochondrial fission factor 1 VLTLSERPLDFLDLERPPT(0.199)T(0.801)PQNEEIR;VLTLSERPLDFLDLERPPT(0.139)T(0.861)PQNEEIR 194.99 1.4050000000000002e-15 3104200000.0 205685.0 315830.0 237613.0 297170.0 310310.0 387720.0 336590.0 409860.0 576230.0 419030.0 True False 194275.24302711795 300657.0527295051 252929.91417424197 325412.9474525819 334729.63157761865 385300.0956625687 370615.8020018375 408438.2913220434 471601.15757620457 415317.72020040685 0.46777499147730234 0.7239205988716939 0.6090034252624558 0.78352772257239 0.8059603895930534 0.9277237086745216 0.8923669373485944 0.983435744386144 1.1355189885676893 1.0 18.6638559024236 -5.467587883300795 0.43251239953479503 1.0663361092754022 0.4296917085599032 0.8646783033859128 0.06913196537879945 0.6797133787610228 0.2035031095939164 0.05986726109626252 0.20255177836565816 3.4073136784024095e-06 5.467587883300795 -0.636644400715499 down VLTPELY(ph)AELR ddPTM_KYSE-520_SHP099_60min_R1 1 VLTPELYAELR 11 0 P12277;G3V4N7;G3V461 P12277 CKB Creatine kinase B-type 1 VLT(0.468)PELY(0.532)AELR 86.67 0.018341999999999997 19255000.0 92982.0 96487.0 94471.0 82956.0 90586.0 104830.0 76170.0 90017.0 119430.0 90758.0 True False 87824.10310497833 91851.6196900603 100560.75181894448 90840.11329836922 97714.6028361643 104175.71708528601 83870.00694756217 89704.75203712584 97744.52258529754 89953.95472865549 0.9763228684041539 1.021095959228575 1.1179136272805816 1.0098512463669531 1.0862735621898856 1.1581004681731917 0.9323659776888583 0.9972296638621241 1.0866061740158302 1.0 16.456899088952834 -10.698330489661362 7.394818527949873 0.9997441275423533 1.043532621953548 0.03694335912148661 0.06557241858686808 0.00028329851200257805 1.1557127919158604e-05 0.06502448628909657 0.015678882409097622 2.0029472433430424e-11 10.698330489661362 0.04378849441119459 VLTQMGSPLNPISS(ph)VS(ph) ddPTM_KYSE-520_SHP099_60min_R1 1 VLTQMGSPLNPISSVS 16 0 Q99717 Q99717 SMAD5 Mothers against decapentaplegic homolog 5 2 VLTQMGSPLNPIS(0.282)S(0.897)VS(0.821) 129.05 6.9744e-05 51583000.0 118670.0 119470.0 113080.0 106860.0 104640.0 109090.0 110420.0 109220.0 116610.0 111040.0 True False 112087.13853722002 113730.48187187407 120369.31773439707 117015.94227136935 112874.57267984275 108409.12884511922 121582.33119535001 108841.14131213956 95436.56349888275 110056.27198781283 1.0184529833032332 1.0333848295758021 1.0937070242368947 1.0632373799134973 1.0256078153577837 0.985033627680247 1.104728781007715 0.9889590056638679 0.8671615145155107 1.0 16.747881839637888 -7.523161351424555 24.9995646383881 0.9317405537132201 1.0452541377612647 0.5096236584870787 0.0446203842229075 7.77681556383862 687543.5835374236 0.028374038376371206 0.010953462438539638 2.998048460941601e-08 7.523161351424555 0.11351358404804468 VLVQNAAGS(ph)QEK ddPTM_KYSE-520_SHP099_60min_R1 4 VLVQNAAGSQEK 12 0 Q9Y490 Q9Y490 TLN1 Talin-1 1 VLVQNAAGS(1)QEK;VLVQNAAGS(1)QEK;VLVQNAAGS(1)QEK;VLVQNAAGS(1)QEK 198.81 4.2944000000000004e-08 1724240000.0 2556660.0 2419010.0 2209470.0 1852310.0 2052360.0 2349530.0 2102450.0 2477260.0 2878890.0 2381180.0 True False 2414836.9732246455 2302797.1285919663 2351895.9714769954 2028352.9854826902 2213869.055668979 2334865.711756097 2314986.163934647 2468666.9632568336 2356156.1469110576 2360084.5977300056 1.0231993274933036 0.9757265187895637 0.9965303674872984 0.8594407960772321 0.9380464826550452 0.9893144144077867 0.9808911791387752 1.0460078276987468 0.9983354618632203 1.0 21.170407143546075 -6.788210697492094 2.133314309062021 1.015092634184653 0.9575894717990655 0.21550175721223086 0.04305312435973445 0.4881637746027025 4.54173757034753 0.023044606004025355 0.01460405862390989 1.6285057731667603e-07 6.788210697492094 -0.05750316238558739 VLVTVEEDDTIMEELVDNHGK ddPTM_KYSE-520_SHP099_60min_R1 6 VLVTVEEDDTIMEELVDNHGK 21 0 Q9NR45 Q9NR45 NANS Sialic acid synthase 0 ;;;;; 350.94 1.5829e-65 153440000.0 248167.0 170042.0 123001.1 229764.0 168919.0 165565.0 152117.0 196964.0 175206.0 120538.5 False True 234400.6818013503 161872.9270817544 130929.94771471847 251600.70147893435 182211.96428236205 164531.64742178138 167494.4708788543 196280.7778557433 143393.00698383703 119470.62266753393 1.9619943092926437 1.3549182507587556 1.0959175133712482 2.105962920935765 1.5251612506400543 1.377172427397859 1.4019720257503172 1.6429208576401142 1.2002365416883694 1.0 16.86629638350241 -7.934027867988217 4.097552401382051 1.003116893305944 1.5410918964873914 0.3081353908945753 0.28077316338489366 0.24013855134378345 7.745054043695227 0.2688887817550485 0.07075440132190623 1.1640513316858517e-08 7.934027867988217 0.5379750031814474 VLVTVEEDDTIMEELVDNHGKK ddPTM_KYSE-520_SHP099_60min_R1 1 VLVTVEEDDTIMEELVDNHGKK 22 1 Q9NR45 Q9NR45 NANS Sialic acid synthase 0 232.54 1.8595000000000002e-26 39270000.0 76214.0 66130.0 53544.0 55911.0 70909.0 52765.0 55125.0 61946.0 69370.0 45127.0 False True 71986.25749115761 62953.01553684632 56995.531913429084 61224.76462974488 76489.13488297949 52435.674062817074 60697.57296815504 61731.123784305084 56774.15667539227 44727.20988827471 1.609451107524346 1.4074880971582697 1.2742921379580738 1.3688482868186918 1.7101253369938285 1.172343953351831 1.3570614648169006 1.3801693407325184 1.2693426846255322 1.0 15.448865144467039 -12.872860113977806 0.1480803285249458 2.581421587832746e-11 1.5351998447031787 0.47336788663256624 0.13915231410845053 86.82137098000067 1.0480988465759904 26.721396219957548 0.7888743215559726 1.3401082660780482e-13 12.872860113977806 1.5351998446773645 VMATTSAS(ph)LKR ddPTM_KYSE-520_SHP099_60min_R1 1 VMATTSASLKR 11 1 J3KP58;P30622-2;P30622-1;P30622;F5H1T5;F5H6A0;F5H0N7 J3KP58 CLIP1 CAP-Gly domain-containing linker protein 1 1 VMATTSAS(1)LKR 124.51 0.00012559 0.0 146770.0 164710.0 131570.0 141160.0 128770.0 146990.0 146010.0 142950.0 144620.0 159100.0 True False 138628.3755212587 156797.0843652498 140051.21271944302 154575.80395869847 138903.4663989233 146072.5808868278 160770.11572027777 142454.1398147808 118360.65357352204 157690.49777792697 0.8791168616671301 0.9943343865022523 0.8881398352656286 0.9802480563945275 0.8808613604260345 0.9263245594705365 1.019529508662518 0.9033780844258397 0.7505883692510595 1.0 17.266736202278036 -7.52650942252962 24.999631056067432 0.8591905373443205 0.9392314146422791 0.10332844289105414 0.07251619205526641 187.76690562883456 1292834.0637573283 0.044594028791965945 0.017031378462311175 2.9750247115201984e-08 7.52650942252962 0.08004087729795861 VMDS(ph)PERPVVNANVSVPLMFR ddPTM_KYSE-520_SHP099_60min_R1 2 VMDSPERPVVNANVSVPLMFR 21 1 Q8N0Z3 Q8N0Z3 SPICE1 Spindle and centriole-associated protein 1 1 VMDS(1)PERPVVNANVSVPLMFR;VMDS(1)PERPVVNANVSVPLMFR 125.83 3.4537e-07 0.0 68038.0 73752.0 67386.0 46883.0 78514.0 70160.0 66592.0 62508.0 78867.0 64962.0 True False 64263.79650960965 70208.84321599104 71729.80938141211 51338.74622411207 84692.60511644855 69722.10541546936 73323.76923529031 62291.17433747687 64546.74087527975 64386.48721967126 0.9980944649202088 1.0904282287750116 1.1140506724134087 0.7973528055499685 1.3153785642552247 1.0828686021896838 1.1388067962944957 0.9674572573738076 1.002488933043695 1.0 15.97447032151181 -7.27882155652577 24.43849452364204 0.9887298119357812 1.0773468977883378 0.09673204744373276 0.12142144315369528 1593.7811082803255 2240761.894832663 0.06534031179267542 0.031509148324069466 5.262334414484725e-08 7.27882155652577 0.08861708585255657 VMEHFIK ddPTM_KYSE-520_SHP099_60min_R1 3 VMEHFIK 7 0 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ;; 110.63 0.0050531000000000005 5442320000.0 8855200.0 7242130.0 5210830.0 5064600.0 8789500.0 7734210.0 5867220.0 6689900.0 6321410.0 5903440.0 False True 8363984.403596452 6894207.204141242 5546728.439422789 5545938.061272487 9481183.644586002 7685937.926530468 6460335.856149092 6666694.298334395 5173601.293778166 5851140.114406819 1.4294623338454067 1.1782673238615766 0.9479739556681439 0.9478388746181524 1.6203993511010275 1.313579537705133 1.104115732973527 1.1393838069130318 0.8842039658287449 1.0 22.48028633541155 -7.486214518674615 2.033253635250928 0.9477610844456791 1.2203908734258828 0.23282138521837392 0.19654955951848258 0.5782222787548938 4.344652327836303 0.17813541612367514 0.05983064483891348 3.264265547629066e-08 7.486214518674615 0.27262978898020374 VMEKPS(ph)PLLVGR ddPTM_KYSE-520_SHP099_60min_R1 1 VMEKPSPLLVGR 12 1 Q9UN86-2;Q9UN86;D6R9X5;D6RB17;E5RJU8;E5RIZ6;D6RAC7;D6RGJ4;E5RH42;D6RBW8;E5RH00;E5RIF8;E5RI46;D6RBR0;D6REX8;D6RBM9;D6R9A4;Q13283-2;D6RE13;Q13283 Q9UN86-2;Q13283 G3BP2;G3BP1 Ras GTPase-activating protein-binding protein 2;Ras GTPase-activating protein-binding protein 1 1 VMEKPS(1)PLLVGR 72.49600000000001 0.047936 0.0 121560.0 129940.0 100470.0 107430.0 125530.0 112450.0 108710.0 92090.0 159820.0 116190.0 True False 114816.82447614778 123697.48735608369 106946.45695768364 117640.1148999927 135408.49683200175 111748.1578387903 119699.46770735846 91770.56128396753 130800.71673434047 115160.64699445208 0.9970144096331722 1.0741298402226143 0.9286719009388323 1.0215305138539215 1.1758226474580775 0.9703675756890617 1.0394129490530306 0.7968916785296337 1.1358108880774338 1.0 16.81328827380913 -10.264323986602461 6.476731314294629 0.9999997847544665 1.012523068120956 0.0013316846168406338 0.10100086719945335 3.0496438604145244e-07 3.4521969120440796e-08 0.09496570097536301 0.023032169919708263 5.440966016809923e-11 10.264323986602461 0.012523283366489557 VMIGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 VMIGSPK 7 0 Q68CZ2;Q68CZ2-2 Q68CZ2 TNS3 Tensin-3 1 VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK;VMIGS(1)PK 111.06 0.0029621 10631440000.0 27679300.0 25348400.0 22575490.0 22327070.0 24071460.0 23645860.0 21933190.0 24121250.0 27473010.0 22629280.0 True False 26143874.051683433 24130624.815275893 24030742.20746116 24449028.019921657 25965746.95412776 23498277.416753616 24150410.892506283 24037579.01369209 22484603.922223125 22428802.184513412 1.1656384427758337 1.0758766614802797 1.0714233426185304 1.0900728366494383 1.157696551983348 1.0476831184938915 1.0767588341914043 1.0717281652378878 1.002487949969448 1.0 24.418849239223064 -7.50158100131392 0.851754473528532 0.9951276121162811 1.1042396427427066 0.5509186680497244 0.03477546046910839 0.4660790891450379 0.6542544525982715 0.03253681850011838 0.012964866285160047 3.1507866645588386e-08 7.50158100131392 0.1091120306264255 VMIY(ph)QDEVK ddPTM_KYSE-520_SHP099_60min_R1 2 VMIYQDEVK 9 0 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 VMIY(1)QDEVK;VMIY(1)QDEVK 158.76 0.00011654 4405200000.0 7473000.0 7377500.0 6664000.0 6538400.0 7347400.0 6755800.0 7133800.0 7362400.0 8629700.0 7589900.0 True False 7058457.792943831 7023073.826146732 7093572.102776997 7159807.570158361 7925598.5790125895 6713634.546263231 7854954.123178678 7336861.552797076 7062764.017033764 7522659.390852851 0.9382928863596477 0.9335892350365367 0.94296069172059 0.9517654858685085 1.053563396562882 0.892454941456827 1.044172508026866 0.9753015750943483 0.9388653201049758 1.0 22.84281133917216 -5.539089449237191 24.99993797005151 0.9831968688340212 0.9394036300074653 0.18747900580635246 0.0438876234320162 399.6803415681956 616378.8157608131 0.012370639702989681 0.0159750196745795 2.8900845662953513e-06 5.539089449237191 -0.04379323882655595 VMIY(ph)QDEVKLPAK ddPTM_KYSE-520_SHP099_60min_R1 2 VMIYQDEVKLPAK 13 1 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 VMIY(1)QDEVKLPAK;VMIY(1)QDEVKLPAK 157.03 1.8398e-05 699590000.0 1529480.0 1762830.0 1686030.0 1248130.0 1320090.0 1224300.0 940500.0 1064570.0 1940900.0 1166060.0 True False 1444636.6954572091 1678141.0007382242 1794714.1915433803 1366751.8999360332 1423973.5727153446 1216658.689568973 1035574.9183954612 1060877.2551425048 1588481.4861073794 1155729.6155809537 1.2499780882841094 1.452018688553437 1.5528841411935494 1.1825879353701638 1.2320992328292566 1.052719142234139 0.8960356336243109 0.917928588867415 1.374440409497418 1.0 20.14037248629161 -5.768280229501508 1.609818242745304 1.038132276679561 1.413090518780501 0.5028760825819151 0.1504220720071033 0.30023306886616474 1.6140177312897108 0.05565338171412974 0.07470298315798025 1.704981890551798e-06 5.768280229501508 0.37495824210093986 VMIYQDEVKLPAKLS(ph)ISK ddPTM_KYSE-520_SHP099_60min_R1 5 VMIYQDEVKLPAKLSISK 18 2 Q6NZI2 Q6NZI2 PTRF Polymerase I and transcript release factor 1 VMIYQDEVKLPAKLS(0.953)IS(0.047)K;VMIYQDEVKLPAKLS(0.974)IS(0.026)K;VMIYQDEVKLPAKLS(0.845)IS(0.155)K;VMIYQDEVKLPAKLS(0.989)IS(0.011)K;VMIYQDEVKLPAKLS(0.997)IS(0.003)K 183.09 6.712e-11 3308534000.0 1673830.0 2189840.0 2224870.0 1521090.0 1431340.0 1575940.0 1050500.0 1150700.0 2608150.0 1246190.0 True False 1580979.3132026203 2084636.799383148 2368288.6801178646 1665653.936267614 1543978.3147894316 1566103.9738947405 1156694.7918920075 1146708.4902753995 2134575.706111061 1235149.7261211502 1.2799900123586712 1.6877604028863102 1.9174101973492808 1.3485441489740795 1.250033321578043 1.267946663286657 0.9364814381852137 0.928396344203961 1.728191862871927 1.0 20.236254506712687 -5.511936668562467 4.150342710373903 1.178294598812041 1.6378200626690118 0.3636717811882464 0.26087804473399884 0.22270789408543723 8.992984275464337 0.07764126624081107 0.11012520735930416 3.0765454224171247e-06 5.511936668562467 0.4595254638569708 VMLADS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 VMLADSPR 8 0 H7BZE0;H7C476;Q8IUH3-3;Q8IUH3 H7BZE0 RBM45 RNA-binding protein 45 1 VMLADS(1)PR;VMLADS(1)PR 128.87 0.00082625 705920000.0 818210.0 725660.0 663790.0 661560.0 747590.0 702840.0 656480.0 761120.0 785610.0 807410.0 True False 772822.2602388026 690798.2043621335 706578.965501551 724434.4634947337 806421.07979476 698453.3148547395 722843.4050273821 758479.8523667435 642963.0276164752 800256.9755554737 0.965717618021851 0.8632204722522253 0.8829400893520497 0.9052522947293147 1.0077026560562095 0.8727862876420786 0.9032641102886265 0.9477953651578833 0.803445702138594 1.0 19.610103821722106 -1.079314497035522 6.868919147844866 0.9122037517332435 1.9778991529252452 0.0 0.06142046250497569 0.0 0.0 0.013278959689017293 0.0 0.0833077687772181 1.079314497035522 1.0656954011920017 VMLVKHKAT(ph)EQY(ph)YAMK ddPTM_KYSE-520_SHP099_60min_R1 1 VMLVKHKATEQYYAMK 16 2 B1APF7;B1APF9;A0A0A0MS54;B1APG1;B1APG3;A0A087WVC4;B1APF8;B1APG2;B1APG0;P22694-8;P22694-10;P22694-4;P22694-3;P22694;P22694-5;P22694-7;P22694-6;P22694-9;P22694-2 B1APF7 PRKACB cAMP-dependent protein kinase catalytic subunit beta 2 VMLVKHKAT(0.897)EQY(0.897)Y(0.207)AMK 46.408 0.047678 317270000.0 377300.0 462900.0 334440.0 321800.0 313440.0 422650.0 329870.0 389000.0 490540.0 437610.0 True False 356370.41687109665 440661.5891729345 355998.5375229197 352383.77524730214 338105.9447703547 420012.0845759427 363216.4788209574 387650.64979328227 401470.3015070916 433733.1158554285 0.8216352495203103 1.015974047321338 0.8207778574176955 0.8124437871254413 0.7795253173222122 0.9683652670780636 0.8374192920561416 0.8937538675799281 0.9256159763482512 1.0 18.726448072713882 -8.076507417162341 1.184487386296527 1.0001701123307172 0.8662314886534305 0.26569697840009177 0.06950154491774184 0.8258048900663907 2.543700743255188 0.06695177006660122 0.0209802887927347 8.384797583993435e-09 8.076507417162341 -0.1339386236772867 VMPNS(ph)PQNGVLVK ddPTM_KYSE-520_SHP099_60min_R1 3 VMPNSPQNGVLVK 13 0 A0A0J9YWL0;Q9Y4K1 A0A0J9YWL0 AIM1 Absent in melanoma 1 protein 1 VMPNS(1)PQNGVLVK;VMPNS(1)PQNGVLVK;VMPNS(1)PQNGVLVK 196.41 1.5823e-08 2544557000.0 1856850.0 2346290.0 1548350.0 1186660.0 1558870.0 1929750.0 1512120.0 1884860.0 2214540.0 1846560.0 True False 1753846.8289612967 2233570.7065469082 1648159.1184475943 1299439.8096176628 1681544.2002429913 1917705.7144455835 1664979.8464690524 1878321.8605896332 1812435.3600104244 1830200.9150019404 0.9582810360246362 1.2203964538748688 0.9005345287163988 0.7099984482393754 0.9187757401166027 1.0478115810818236 0.9097251743354565 1.0262927120149767 0.9902931121682358 1.0 20.803570602077397 -9.197569823869026 16.7092950745909 0.9999999999982823 0.9641135587675478 0.007367054646035043 0.12284230229136604 0.0 0.0 0.12707348541046176 0.03081984720957169 6.344978811297566e-10 9.197569823869026 -0.03588644123073448 VMPTKS(ph)PPPPGGGNLGMNSR ddPTM_KYSE-520_SHP099_60min_R1 1 VMPTKSPPPPGGGNLGMNSR 20 1 Q02078-3;Q02078-5;Q02078;Q02078-8;Q02078-7;Q02078-4;Q02078-6;Q02078-2 Q02078-3;Q02078-8 MEF2A Myocyte-specific enhancer factor 2A 1 VMPT(0.191)KS(0.808)PPPPGGGNLGMNS(0.001)R 47.018 0.063483 885750000.0 651590.0 619720.0 623080.0 569520.0 513610.0 458310.0 477770.0 548920.0 804900.0 491110.0 True False 615445.0037875379 589947.720981316 663244.7337632485 623647.0095675685 554028.1849588492 455449.51728853805 526067.654185858 547015.9246388905 658750.4498778038 486759.14747779834 1.2643727539103087 1.2119910309610036 1.3625727163011352 1.2812229884103283 1.1381977880222973 0.9356773666165393 1.0807555582914907 1.1237917715020251 1.3533396409522025 1.0 18.89284856565121 -5.8162131812420546 4.708254625278776 1.0990704445027408 1.281694816096527 0.393869707431729 0.10685816574735253 0.22279689964084445 10.184914850047083 0.034900440066929314 0.04080442882517413 1.526816409022922e-06 5.8162131812420546 0.18262437159378608 VMQEQGTHPK ddPTM_KYSE-520_SHP099_60min_R1 1 VMQEQGTHPK 10 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 91.31299999999999 0.005889 432060000.0 659430.0 643060.0 521330.0 471970.0 662710.0 679090.0 491940.0 660010.0 631680.0 602750.0 False True 622850.1033588853 612166.432347261 554935.7659574932 516825.8868970451 714861.5066958971 674851.547414354 541670.0960717315 657720.5793574918 516982.83535695256 597410.1039324043 1.042583811788626 1.0247005002388214 0.9289025450099904 0.8651107229273156 1.196600964714822 1.1296286135306344 0.9066972461734935 1.1009532229671017 0.8653734377004244 1.0 19.188362112436877 -3.0094836850572695 17.33110806313197 1.0092846246087794 55.64363730018076 0.0 0.10857619480623253 0.0 0.0 0.024965271054968274 0.0 0.000978399709189874 3.0094836850572695 54.634352675571975 VMSS(ph)PSAMK ddPTM_KYSE-520_SHP099_60min_R1 3 VMSSPSAMK 9 0 A0A494C142;Q99728-3;Q99728-2;Q99728 A0A494C142 BARD1 BRCA1-associated RING domain protein 1 1 VMS(0.104)S(0.676)PS(0.22)AMK;VMS(0.049)S(0.949)PS(0.002)AMK;VMS(0.001)S(0.894)PS(0.105)AMK 112.83 0.00089758 1760580000.0 5355500.0 5371300.0 4112800.0 4033300.0 3947700.0 4877100.0 4154000.0 5219300.0 5991700.0 5116900.0 True False 5058419.7390754325 5113254.685514324 4377917.668712666 4416623.619344133 4258361.530659553 4846660.209831609 4573926.859133171 5201195.466493784 4903758.318465438 5071568.246887959 0.9974074078919091 1.008219634755373 0.8632275965918562 0.8708595456749072 0.8396537960960281 0.9556531577398454 0.9018762316646034 1.0255595928705816 0.9669116296472017 1.0 22.27400050041136 -7.255717059039168 24.938554112190385 0.9971767094326857 0.9172425309399167 0.3031426120267038 0.0540678117395516 599.3811029965702 2612186.003789833 0.02879205358983326 0.016029386291680794 5.549871669210188e-08 7.255717059039168 -0.07993417849276896 VMTIPYQPMPAS(ph)SPVICAGGQDR ddPTM_KYSE-520_SHP099_60min_R1 1 VMTIPYQPMPASSPVICAGGQDR 23 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 VMTIPYQPMPAS(0.826)S(0.174)PVICAGGQDR 75.184 0.0087783 272360000.0 71807.0 127230.0 72199.0 55628.0 80864.0 130230.0 77816.0 116910.0 111630.0 104470.0 True False 67823.72256629431 121117.67982387666 76853.06306248442 60914.86839483191 87227.53674677762 129417.18626363442 85682.40069097423 116504.46649699903 91360.80596329868 103544.47707643006 0.6550201853473177 1.169716466233879 0.742222716579623 0.5882966442514201 0.8424161211649338 1.249870489645785 0.8274936830066643 1.1251635025497566 0.8823339355498588 1.0 16.65989107862836 -6.025096945958323 24.663959215888326 1.0166405041504372 0.8005262383343437 0.26886397096396686 0.1806043424446987 918.0712048473778 902230.4886905599 0.05901112910812914 0.05927511760639837 9.438501605716294e-07 6.025096945958323 -0.2161142658160935 VMTIPYQPMPASS(ph)PVICAGGQDR ddPTM_KYSE-520_SHP099_60min_R1 2 VMTIPYQPMPASSPVICAGGQDR 23 0 Q15365 Q15365 PCBP1 Poly(rC)-binding protein 1 1 VMTIPYQPMPAS(0.192)S(0.808)PVICAGGQDR;VMTIPYQPMPAS(0.343)S(0.657)PVICAGGQDR 174.89 6.707300000000001e-11 1235300000.0 567100.0 816370.0 485640.0 422380.0 511770.0 770110.0 540060.0 671230.0 758290.0 729690.0 True False 535641.8325141772 777150.3598036473 516945.1314514741 462522.8682068222 552043.3874270183 765303.4578321995 594654.5352776741 668901.6597962601 620603.6509353208 723225.5142902303 0.7406290595815791 1.0745615917136697 0.7147772323253851 0.6395278638098653 0.7633074006920105 1.058180944547102 0.8222256039477048 0.9248867007308454 0.8581053055690075 1.0 19.46408604916266 -6.218794643312637 24.995480317027752 0.9210818800180152 0.7904042021887298 0.25818490194179744 0.12297059346443259 809.7311545905875 474610.1286818413 0.04226490775399321 0.0422646744372856 6.042342747675135e-07 6.218794643312637 -0.1306776778292854 VNASASS(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 7 VNASASSLK 9 0 Q16658 Q16658 FSCN1 Fascin 1 VNASAS(0.134)S(0.866)LK;VNASAS(0.092)S(0.908)LK;VNASAS(0.087)S(0.913)LK;VNASAS(0.027)S(0.973)LK;VNASAS(0.067)S(0.933)LK;VNAS(0.001)AS(0.113)S(0.886)LK;VNASAS(0.067)S(0.933)LK 155.24 0.00020238 5948560000.0 12817340.0 12236030.0 10147340.0 8993110.0 9846360.0 11421110.0 9552190.0 11515650.0 13578840.0 11884070.0 True False 12106336.59946616 11648192.752144532 10801453.772718048 9847812.470522895 10621212.513875159 11349826.616044348 10517818.585590586 11475704.897922924 11113264.95070036 11778786.385466548 1.0278084858049354 0.9889128107898153 0.917026034706394 0.836063423535194 0.9017238420233445 0.9635820062114822 0.8929458639786669 0.9742688696759467 0.9434983016936828 1.0 23.489687564511858 -9.437801973966264 12.803116749025369 1.0000002081844708 0.9356474048876406 0.11052367572180422 0.051867541737416506 0.0 0.0 0.05414691898426049 0.013132556839639304 3.649203023607131e-10 9.437801973966264 -0.06435280329683013 VNASASS(ph)LKK ddPTM_KYSE-520_SHP099_60min_R1 2 VNASASSLKK 10 1 Q16658 Q16658 FSCN1 Fascin 1 VNASAS(0.028)S(0.972)LKK;VNASAS(0.107)S(0.893)LKK 137.81 0.00027971 1088170000.0 1998080.0 1763830.0 1732850.0 1523340.0 1792680.0 1776410.0 1628330.0 1816310.0 2243500.0 1947070.0 True False 1887242.5193262682 1679092.9592371925 1844552.2836580304 1668117.775591127 1933753.717046069 1765322.7662641683 1792937.4873693557 1810009.6445399416 1836136.9540326153 1929820.4745975365 0.9779368309997085 0.8700772850839231 0.9558154802159571 0.8643901324235937 1.002038139039515 0.9147600978958035 0.9290695745899744 0.9379160747672234 0.9514548001754107 1.0 20.880035213473235 -9.219358080454347 0.38930038645021386 1.015387993789576 0.9244381241381917 0.20556453021633947 0.04048847474428171 8.906825808471794 1.5815534628386538 0.23216421735187365 0.02752597574162605 6.034508724905233e-10 9.219358080454347 -0.0909498696513843 VNDAEPGS(ph)PEAPQGK ddPTM_KYSE-520_SHP099_60min_R1 1 VNDAEPGSPEAPQGK 15 0 Q8N8A6 Q8N8A6 DDX51 ATP-dependent RNA helicase DDX51 1 VNDAEPGS(1)PEAPQGK 268.14 3.6722e-25 4350400000.0 2638200.0 2662200.0 2287600.0 1957800.0 2001000.0 2689200.0 2159400.0 2462000.0 2906400.0 2453200.0 True False 2491853.786878686 2534303.9159563337 2435062.356289416 2143868.7233659676 2158467.315867406 2672415.705291911 2377693.2257130872 2453459.8966351203 2378671.0243817205 2431466.5565607185 1.0248357231790943 1.042294375432857 1.0014788604511113 0.8817183676992232 0.887722395376284 1.099096221612035 0.9778844044954939 1.009045298202872 0.9782865480766979 1.0 21.21339531758768 -8.869270587050883 14.651667702647421 1.0000064771084782 0.9884213678484375 0.002598767725073614 0.06229978298558998 0.0 0.0 0.06408782494385891 0.015543580679977917 1.3512304171529249e-09 8.869270587050883 -0.011585109260040749 VNEEKDGPIS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 VNEEKDGPISPK 12 1 Q8WWQ0 Q8WWQ0 PHIP PH-interacting protein 1 VNEEKDGPIS(1)PK;VNEEKDGPIS(1)PK;VNEEKDGPIS(1)PK;VNEEKDGPIS(1)PK;VNEEKDGPIS(1)PK 212.43 1.8596000000000002e-10 3644110000.0 7473490.0 6315300.0 6441110.0 5615700.0 5791000.0 5669740.0 6153420.0 6211930.0 7776840.0 6090400.0 True False 7058920.611667037 6011903.508541445 6856314.256740381 6149414.439578225 6246718.75371722 5634353.049576734 6775467.745191914 6190382.264705355 6364761.894182755 6036443.794259506 1.1693839704727937 0.9959346452059409 1.1358201103869383 1.0187147680271869 1.0348342445692413 0.9333894659857267 1.1224270408407016 1.0255015164047814 1.0543893244289742 1.0 22.52526744481122 -4.249265382999215 24.121034216649058 1.0385537661379427 1.1693841029659995 0.3357631633823962 0.05629061194403238 1359.3830555651707 2693343.9851442706 0.013523084195344695 0.21248730069199187 5.632933407000179e-05 4.249265382999215 0.13083033682805678 VNFPENGFLS(ph)PDK ddPTM_KYSE-520_SHP099_60min_R1 2 VNFPENGFLSPDK 13 0 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 1 VNFPENGFLS(1)PDK;VNFPENGFLS(1)PDK 105.39 0.00071274 717280000.0 723860.0 680870.0 491130.0 543750.0 523820.0 632610.0 599620.0 656600.0 592790.0 653960.0 True False 683706.0428208655 648159.9831932939 522789.0256357841 595427.836515601 565041.6538718959 628661.6463352358 660235.4413272575 654322.4078515918 485154.27901983185 648166.4231731811 1.0548310100262455 0.9999900643111754 0.8065660406727087 0.9186341890414631 0.8717539719284788 0.9699077642089863 1.0186202458544382 1.0094975371421946 0.7485026401779614 1.0 19.306004761405106 -4.534382240063635 24.708220373127276 0.920847221032913 1.0411208347109033 0.2222863210850703 0.08453188659009211 240.22968443104727 515986.5021064002 0.02164338363309512 0.05736285013261087 2.921579845833335e-05 4.534382240063635 0.12027361367799028 VNFPENGFLS(ph)PDKLSLLEK ddPTM_KYSE-520_SHP099_60min_R1 4 VNFPENGFLSPDKLSLLEK 19 1 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 1 VNFPENGFLS(0.831)PDKLS(0.169)LLEK;VNFPENGFLS(0.989)PDKLS(0.011)LLEK;VNFPENGFLS(1)PDKLSLLEK;VNFPENGFLS(1)PDKLSLLEK 232.69 4.0249000000000004e-26 13697790000.0 1371084.0 1423650.0 1094701.0 944224.0 990478.0 1333920.0 947461.0 1245640.0 1430470.0 1297850.0 True False 1295027.237331809 1355255.717057784 1165267.1780435296 1033962.7650687027 1068422.9835510836 1325594.510487498 1043239.6042082742 1241319.1655745604 1170732.7072141888 1286352.0587120212 1.0067440158089178 1.0535651635017818 0.9058695635860919 0.8037945429216112 0.8305836464558992 1.030506774183398 0.8110062848990447 0.9649917821233553 0.910118423090489 1.0 20.29485411389266 -4.7695091459223375 24.35615145496836 0.9004105479906005 1.0301545935418814 0.3047833626071057 0.07378180660116825 128.95561099395943 389219.5806471575 0.019013526958358014 0.04076757286391094 1.70016414905895e-05 4.7695091459223375 0.12974404555128094 VNFPENGFLSPDKLS(ph)LLEK ddPTM_KYSE-520_SHP099_60min_R1 4 VNFPENGFLSPDKLSLLEK 19 1 P31689 P31689 DNAJA1 DnaJ homolog subfamily A member 1 1 VNFPENGFLSPDKLS(1)LLEK;VNFPENGFLS(0.001)PDKLS(0.999)LLEK;VNFPENGFLSPDKLS(1)LLEK;VNFPENGFLSPDKLS(1)LLEK 132.26 4.9086e-06 3040543000.0 870930.0 866440.0 743482.0 647653.0 683025.0 827260.0 660531.0 772770.0 907040.0 891880.0 True False 822617.776744088 824814.9218470447 791408.0393332595 709205.7463960246 736775.1816193573 822096.7634834837 727303.919641331 770089.4412358734 742344.4006176697 883978.637072141 0.9305855845891382 0.9330711029159543 0.8952795985596573 0.8022883321536046 0.8334762297646221 0.9299961888291569 0.8227618735790513 0.8711629545556844 0.8397764035072347 1.0 19.753651979163823 -5.108160333951384 0.0027845705822719833 1.752440451847306 1.1731144842244386e-07 0.028195596770817843 0.05860611411209491 558424.6728263401 329.2253205675505 102066.55680218882 105137.75723409165 7.795422639789657e-06 5.108160333951384 -1.7524403345358577 VNFTVDQIR ddPTM_KYSE-520_SHP099_60min_R1 2 VNFTVDQIR 9 0 P13639 P13639 EEF2 Elongation factor 2 0 ; 139.02 0.0032841000000000003 122700000.0 238710.0 302460.0 222090.0 195861.0 301450.0 321020.0 224100.0 248220.0 293820.0 293080.0 False True 225468.2804434123 287929.36759828415 236406.27675656427 214475.57055224304 325172.39998412237 319016.39510367735 246754.21500523406 247358.9827549838 240469.69459944882 290483.5392127897 0.7761826403466141 0.991207172628689 0.813837084873123 0.738339842365842 1.1194176470905701 1.09822537954547 0.8494602333541443 0.8515421680186305 0.8278255465047061 1.0 18.148096887399063 -4.238975027005551 22.72116001431945 0.9168871056257365 0.7761821095971566 0.11404710637685933 0.12065660366424216 4246.419792193099 4294729.831452897 0.03208654723349071 1.3583840824913092 5.7679962982751e-05 4.238975027005551 -0.1407049960285799 VNGDAS(ph)PAAAESGAK ddPTM_KYSE-520_SHP099_60min_R1 7 VNGDASPAAAESGAK 15 0 P29966 P29966 MARCKS Myristoylated alanine-rich C-kinase substrate 1 VNGDAS(1)PAAAESGAK;VNGDAS(1)PAAAESGAK;VNGDAS(1)PAAAESGAK;VNGDAS(1)PAAAESGAK;VNGDAS(1)PAAAESGAK;VNGDAS(1)PAAAESGAK;VNGDAS(1)PAAAESGAK 268.82 4.8907e-27 7450550000.0 11908730.0 13869650.0 10270360.0 9069950.0 9497840.0 13408110.0 10044230.0 12952650.0 15092400.0 12957970.0 True False 11248129.007435288 13203331.195230909 10932403.838757008 9931955.321020095 10245265.97268269 13324425.012004122 11059598.79063822 12907720.280321233 12352000.608442979 12843172.466948101 0.8758061169374112 1.0280428164621844 0.851223003264306 0.7733256986605123 0.7977208122875308 1.037471469474892 0.8611267051890872 1.005025846498538 0.9617561891527072 1.0 23.61449827921094 -6.261292956647415 24.999999980207956 0.9663933223584633 0.868385938222241 0.32939805897395047 0.0765810086182628 19.739790160131495 3370642.0953440703 0.02805259261058937 0.026381445075353113 5.479072452348336e-07 6.261292956647415 -0.09800738413622234 VNGDDHHEEDMDMS(ph)D ddPTM_KYSE-520_SHP099_60min_R1 17 VNGDDHHEEDMDMSD 15 0 Q5T757;Q05519-2;Q05519 Q5T757 SRSF11 Serine/arginine-rich splicing factor 11 1 VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D;VNGDDHHEEDMDMS(1)D 309.29 1.0209e-42 32049724000.0 10282844.9 9641225.8 9160189.7 8436087.1 8642731.6 8862620.2 8772119.1 9024885.1 10798228.0 8895564.4 True False 9712434.995053893 9178046.840793045 9750670.184883725 9237850.28158192 9322865.406503951 8807305.299909761 9658890.50626024 8993579.880012123 8837541.996376058 8816756.620060379 1.1015881932087834 1.0409776787884377 1.1059248434621018 1.0477606085398168 1.0574030574113893 0.9989280275550406 1.0955151562518797 1.0200553636185699 1.0023574855484143 1.0 23.071816605071987 -5.81907154764522 0.21664486756455467 0.9877288218374153 1.1231218568354462 0.43745621118623323 0.030178452177716555 6.04213970747096 0.5179001517616151 0.0720303788826523 0.23712000126681146 1.5168004622782093e-06 5.81907154764522 0.1353930349980309 VNHEPEPAGGATPGATLPKS(ph)PSQLR ddPTM_KYSE-520_SHP099_60min_R1 4 VNHEPEPAGGATPGATLPKSPSQLR 25 1 O00499-6;O00499-11;O00499-2;O00499 O00499-6 BIN1 Myc box-dependent-interacting protein 1 1 VNHEPEPAGGATPGAT(0.002)LPKS(0.878)PS(0.12)QLR;VNHEPEPAGGATPGATLPKS(0.882)PS(0.118)QLR;VNHEPEPAGGATPGATLPKS(0.996)PS(0.004)QLR;VNHEPEPAGGATPGAT(0.006)LPKS(0.823)PS(0.171)QLR 246.28 5.1236e-29 6281680000.0 2615900.0 2827830.0 2588970.0 1708970.0 1786670.0 1992760.0 1523500.0 1848710.0 3288220.0 2234440.0 True False 2470790.8123326343 2691976.8021406345 2755859.1486984594 1871389.994979436 1927270.764238288 1980322.4456632084 1677510.2479271516 1842297.2565021585 2691162.137280647 2214644.599968016 1.115660188713041 1.2155344483622843 1.2443798651658418 0.845006912172934 0.8702392990126369 0.8941942403272327 0.7574625057001824 0.8318703852206195 1.2151665948204569 1.0 21.078643766974658 -5.260889966365348 24.999761445637223 0.8998160891371911 1.1942258072745822 0.5166470748540595 0.12141516318425007 37.29800891665996 1697122.2479789893 0.03379067047200237 0.0542779469415076 5.484158949623951e-06 5.260889966365348 0.29440971813739103 VNIGQGSHPQK ddPTM_KYSE-520_SHP099_60min_R1 1 VNIGQGSHPQK 11 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 74.962 0.029741000000000004 233040000.0 267530.0 230560.0 173570.0 200630.0 292860.0 257530.0 229680.0 258460.0 295310.0 212730.0 False True 252689.57759216684 219483.55152238428 184758.5999218193 219697.81487839104 315906.41585453675 255922.65974409715 252898.29586078605 257563.46258501767 241689.14815929197 210845.37770143585 1.1984591758515275 1.0409692349679127 0.8762753157597967 1.0419854457966375 1.498284758710105 1.2137930768702563 1.1994490873729209 1.2215750963710297 1.1462862064803334 1.0 17.685825868639526 -5.564985985696351 24.99997172229735 1.2278752244399775 1.02552745685921 0.2763531617138131 0.13607765259908924 163.80453059984293 97253.3995476576 0.039984245373296146 0.05161947925707425 2.722789168688893e-06 5.564985985696351 -0.20234776758076745 VNIKPQVDR ddPTM_KYSE-520_SHP099_60min_R1 2 VNIKPQVDR 9 1 P23526;P23526-2 P23526 AHCY Adenosylhomocysteinase 0 ; 57.348 0.051903 1445300000.0 867880.0 804390.0 690310.0 549950.0 797440.0 831540.0 614400.0 676860.0 684870.0 689230.0 False True 819736.9663241124 765745.8969859954 734808.4871350526 602217.0826515035 860193.9911870585 826350.0504158981 676509.5479661578 674512.130640311 560514.8721677361 683123.9584128261 1.1999827501712774 1.1209472125163544 1.0756590778082364 0.8815634047599472 1.259206298642545 1.2096634003817468 0.9903174081874742 0.9873934625385944 0.8205170749244974 1.0 19.38178786548661 -6.941016102589337 5.536754815229525 0.9386984924174103 1.1170952899329694 0.3991275048718286 0.10635702654573627 0.22314384700575027 13.852286250507175 0.04821295144023983 0.03189362009018898 1.1454704693827118e-07 6.941016102589337 0.17839679751555904 VNIS(ph)PTISSESK ddPTM_KYSE-520_SHP099_60min_R1 1 VNISPTISSESK 12 0 Q8TAT5 Q8TAT5 NEIL3 Endonuclease 8-like 3 1 VNIS(0.989)PT(0.011)ISSESK 198.87 4.2676e-08 455980000.0 477180.0 599620.0 367620.0 391380.0 400870.0 538730.0 391330.0 443460.0 570760.0 530490.0 True False 450709.87416525313 570813.3551520302 391317.3734127964 428576.6375273123 432416.1883617022 535367.5862382526 430889.4554127541 441921.74076434254 467124.3716887252 525790.2713149746 0.8572046664881241 1.085629358878123 0.744246127708167 0.8151094854902203 0.8224119234466841 1.0182150858351289 0.8195082315523289 0.840490524214377 0.8884233831875036 1.0 19.004127922487314 VNKEEET(ph)DENETEWLMEEIQLPPPR ddPTM_KYSE-520_SHP099_60min_R1 2 VNKEEETDENETEWLMEEIQLPPPR 25 1 P11717 P11717 IGF2R Cation-independent mannose-6-phosphate receptor 1 VNKEEET(0.996)DENET(0.004)EWLMEEIQLPPPR;VNKEEET(1)DENETEWLMEEIQLPPPR 213.11 1.0585e-20 76320000.0 111005.0 121432.0 102323.0 107454.0 104049.0 107390.0 96945.0 112956.0 158992.0 95039.0 True False 104847.33136701863 115598.22444685188 108918.90430258868 117666.39585277683 112237.06434217292 106719.73917570221 106745.14669202328 112564.18200012867 130123.0606621588 94197.02839922323 1.1130641077408259 1.2271960847525538 1.1562881138985788 1.2491518878290553 1.191513853987972 1.1329416754359338 1.133211402801572 1.194986550138952 1.381392416230742 1.0 16.52339392790847 -10.851951254375887 2.7941716089140196 0.9248420018473218 1.1948390542527318 0.3913723007964709 0.07390038416089151 11532102.92342166 6577295.220082858 5722912.091110973 0.0181493484610147 1.4062053490932012e-11 10.851951254375887 0.26999705240541005 VNLAELFK ddPTM_KYSE-520_SHP099_60min_R1 2 VNLAELFK 8 0 P30044-2;P30044-3;P30044 P30044-2 PRDX5 Peroxiredoxin-5, mitochondrial 0 ; 133.23 0.0057678 521900000.0 586530.0 586710.0 470910.0 398320.0 599650.0 677670.0 444370.0 529810.0 554380.0 552020.0 False True 553994.0116814324 558523.570930336 501265.61208264006 436176.2130407256 646839.0434582152 673440.4101610766 489291.256233271 527972.2127685843 453718.56678252766 547129.5322650614 1.0125463514790596 1.0208251209144286 0.9161735613273345 0.7972083159814091 1.1822411427516377 1.230861012698585 0.8942877826529565 0.9649857696089484 0.8292708399493229 1.0 19.061522904225047 VNLEESSGVENS(ph)PAGARPK ddPTM_KYSE-520_SHP099_60min_R1 3 VNLEESSGVENSPAGARPK 19 1 Q8WVM8-2;Q8WVM8-3;Q8WVM8 Q8WVM8-2 SCFD1 Sec1 family domain-containing protein 1 1 VNLEESSGVENS(1)PAGARPK;VNLEESS(0.001)GVENS(0.999)PAGARPK;VNLEESSGVENS(1)PAGARPK 281.42 1.0508e-43 3382950000.0 1314420.0 1308830.0 1087570.0 862310.0 971790.0 1133660.0 963470.0 1144690.0 1339420.0 1070930.0 True False 1241506.5023686916 1245951.842206117 1157676.5023735245 944263.6831370451 1048264.3442712574 1126584.4074301743 1060866.950161057 1140719.3375626535 1096215.0920304728 1061442.3933709331 1.1696409622625965 1.1738289802513144 1.0906635250331114 0.8896042677721291 0.987584772209988 1.0613712194520164 0.9994578667542676 1.074687938494667 1.0327598547756403 1.0 20.017594644709455 -4.987839576193952 5.312758460255579 1.0091441857196448 1.1654610824793665 0.6603428582437498 0.04769452210076011 0.10772000409725867 9.487539619659227 0.013674037001514748 0.02782462345756518 1.0283961066605157e-05 4.987839576193952 0.1563168967597217 VNLFPGLS(ph)PSALK ddPTM_KYSE-520_SHP099_60min_R1 4 VNLFPGLSPSALK 13 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VNLFPGLS(0.966)PS(0.034)ALK;VNLFPGLS(0.977)PS(0.023)ALK;VNLFPGLS(0.948)PS(0.052)ALK;VNLFPGLS(0.999)PS(0.001)ALK 196.52 1.5671e-08 6098160000.0 2926120.0 3472340.0 2468260.0 2296150.0 2181190.0 2923760.0 2154460.0 2624480.0 3128560.0 2771130.0 True False 2763802.2905243956 3305523.574311399 2627367.988955632 2514375.405637332 2352837.243726553 2905511.729326294 2372253.842303331 2615376.291438234 2560492.368579574 2746579.9441065183 1.0062704697363105 1.20350531991768 0.9565962187240586 0.9154568433489657 0.8566425487723961 1.0578653410620011 0.8637119219462741 0.9522301715812733 0.9322475299048759 1.0 21.38920485400326 -4.878340221693201 7.5116275216400465 0.9361515861796654 1.103797284545474 0.4567096269857962 0.07119812501796693 0.1683503245312791 10.276775378669315 0.017434808424417712 0.03667798779338295 1.3233044663426437e-05 4.878340221693201 0.16764569836580856 VNLS(ph)PNR ddPTM_KYSE-520_SHP099_60min_R1 3 VNLSPNR 7 0 P35568 P35568 IRS1 Insulin receptor substrate 1 1 VNLS(1)PNR;VNLS(1)PNR;VNLS(1)PNR 110.38 0.0029944000000000004 1824290000.0 2303350.0 2047640.0 2044680.0 1839770.0 2037480.0 1949780.0 1871870.0 1937420.0 2271290.0 1826640.0 True False 2175578.5838856124 1949268.300829697 2176483.3444036692 2014621.1876529788 2197818.0843246016 1937610.6997858316 2061096.88729071 1930699.5422172288 1858880.9905615067 1810457.3907044139 1.2016734528279271 1.0766717354619841 1.2021731942317857 1.112769180869332 1.2139573654751814 1.070232699059515 1.1384398759524392 1.0664153446141205 1.02674661116341 1.0 20.787922792565876 -7.437472517696939 0.9095390093839473 0.9970042837586083 1.1532241486122776 0.5853235806938464 0.046497859137325154 0.38057596908214336 0.5850379854238794 0.03969382427226742 0.015587674802386493 3.6519723632942954e-08 7.437472517696939 0.15621986485366934 VNLTLADLEQLAGSDLKVPNEDTKS(ph)DGPETTTQCK ddPTM_KYSE-520_SHP099_60min_R1 1 VNLTLADLEQLAGSDLKVPNEDTKSDGPETTTQCK 35 2 Q76FK4-2;Q76FK4-4;Q76FK4;F8WE42;F5H101 Q76FK4-2 NOL8 Nucleolar protein 8 1 VNLTLADLEQLAGSDLKVPNEDT(0.02)KS(0.98)DGPETTTQCK 230.83 1.0952e-23 624600000.0 115510.0 136910.0 86661.0 94206.0 109810.0 124520.0 96643.0 105450.0 160290.0 102520.0 True False 109102.43003652373 130332.6380939003 92247.30672250265 103159.30991593334 118451.42226656678 123742.82449165129 106412.61758478744 105084.218562215 131185.3765820762 101611.75255935319 1.0737186131377383 1.2826531853957617 0.9078409179943963 1.015230102006913 1.1657256103065168 1.2178003171372422 1.0472471432143637 1.0341738619342629 1.291045309994516 1.0 16.632707750351205 -4.713905593065112 24.999999824271004 1.0899040436268306 1.1781851869234214 0.09160337393928708 0.11667163134508778 318.00610395543833 167247.90421824454 0.029666486429566676 0.07848971954176337 1.9323883339414945e-05 4.713905593065112 0.08828114329659087 VNMS(ph)KYDAAR ddPTM_KYSE-520_SHP099_60min_R1 3 VNMSKYDAAR 10 1 Q86UK0-2;Q86UK0 Q86UK0-2 ABCA12 ATP-binding cassette sub-family A member 12 1 VNMS(0.975)KY(0.025)DAAR;VNMS(0.975)KY(0.025)DAAR;VNMS(0.96)KY(0.04)DAAR 54.65 0.044456 9306130000.0 529191.0 523190.0 494636.0 412709.0 490074.0 520282.0 455526.0 544436.0 693330.0 479814.0 True False 499835.7203138957 498055.1670757992 526521.0280055823 451932.7392745147 528640.0356603718 517034.72704919125 501575.01358533814 542547.4785883176 567438.7494269817 475563.2212496431 1.051039479042285 1.047295385389673 1.1071525393028434 0.9503105351313034 1.111608324696048 1.0872050317317916 1.0546968124813008 1.1408524762757288 1.1931930899448369 1.0 18.859277619771696 -6.56794061119305 1.2475823697523891 1.11527176396192 1.048957539314111 0.11093688050884265 0.0623677735156674 0.8625239458483195 2.738394446356162 0.03555913159676573 0.02440105580192115 2.7043281496997063e-07 6.56794061119305 -0.066314224647809 VNNGNTAPEDS(ph)SPAKK ddPTM_KYSE-520_SHP099_60min_R1 1 VNNGNTAPEDSSPAKK 16 1 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 VNNGNTAPEDS(0.607)S(0.393)PAKK 105.79 0.00038391 687240000.0 303560.0 321520.0 289130.0 226730.0 270720.0 340890.0 297250.0 367420.0 355900.0 271600.0 True False 286720.9216681423 306073.69658864127 307767.78242435696 248278.35103113984 292024.1238139054 338762.3790632747 327298.9308804369 366145.5057764729 291277.53150889586 269193.83530160243 1.0651095384368765 1.1370011361728212 1.1432943183098403 0.922303256881685 1.0848098489578117 1.2584329009010489 1.2158485372212704 1.3601556119078533 1.0820364113559697 1.0 18.03828584619172 -6.187533140984084 6.883693768071262 1.2076286099189273 1.0691448115191635 0.198753237750797 0.10799422161868684 0.34738788790624225 27.571349426679095 0.03504282857434996 0.03501709114050729 6.493320791962121e-07 6.187533140984084 -0.13848379839976377 VNNGNTAPEDSS(ph)PAKK ddPTM_KYSE-520_SHP099_60min_R1 3 VNNGNTAPEDSSPAKK 16 1 E9PJ27;G3V167;Q9UGN5-2;Q9UGN5 E9PJ27 PARP2 Poly [ADP-ribose] polymerase 2 1 VNNGNTAPEDS(0.17)S(0.83)PAKK;VNNGNTAPEDS(0.295)S(0.705)PAKK;VNNGNTAPEDS(0.3)S(0.7)PAKK 259.45 1.9936999999999998e-29 4170100000.0 4367790.0 4228220.0 3967780.0 3327010.0 3556830.0 3969560.0 3561830.0 4059580.0 4776310.0 4102540.0 True False 4125499.9817264993 4025089.964512392 4223549.44747246 3643208.030097971 3836732.285405635 3944784.5036064796 3921894.5365109034 4045498.2644930985 3909052.5049768286 4066194.6873278213 1.0145849618522942 0.9898911080319073 1.0386982848202104 0.895974814352083 0.9435682697050145 0.9701415714058864 0.9645122376292937 0.9949101249629727 0.9613539944752961 1.0 21.95524786166329 -5.227480832672306 24.999996035920724 0.9610214378659501 1.011941414686772 0.407701428512398 0.029168581008860307 675.5607097661697 497341.4648272541 0.008095051241142561 0.014020005950211257 5.922692257480204e-06 5.227480832672306 0.050919976820821944 VNNS(ph)IDDVFLPK ddPTM_KYSE-520_SHP099_60min_R1 3 VNNSIDDVFLPK 12 0 A0A1B0GVL4;P78312-6;P78312-2;P78312-5 A0A1B0GVL4 FAM193A Protein FAM193A 1 VNNS(1)IDDVFLPK;VNNS(1)IDDVFLPK;VNNS(1)IDDVFLPK 179.17 7.6132e-07 182934000.0 428210.0 408890.0 373948.0 346106.0 376477.0 413241.0 345662.0 404238.0 464630.0 413610.0 True False 404456.33768452855 389246.31064359733 398053.28641795466 378999.81017943687 406103.5980388874 410661.8096350339 380604.8882960249 402835.7927278584 380264.9043691433 409945.73718371097 0.9866094485165425 0.9495069111284904 0.9709901831216582 0.9245121385652898 0.9906276885052673 1.0017467493533223 0.9284274814289936 0.9826563766592691 0.9275981425774245 1.0 18.645073433248395 -1.0725151195062352 11.843205170659433 0.9649025802727061 0.9681924309984857 0.0 0.029436398388742024 0.0 0.0 0.006364121243341271 0.0 0.08462231079257579 1.0725151195062352 0.003289850725779586 VNPTVFFDIAVDGEPLGR ddPTM_KYSE-520_SHP099_60min_R1 4 VNPTVFFDIAVDGEPLGR 18 0 P62937;C9J5S7;F8WE65;E5RIZ5 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ;;; 227.91 2.5342e-19 414702000.0 149796.1 220337.0 324937.0 222613.0 297723.0 234482.0 258180.0 175397.0 358805.0 194855.0 False True 141486.61172187806 209751.67978742035 345882.95893758227 243770.072588961 321152.10628785216 233018.5108613186 284279.3539939819 174788.5887449676 293655.0567379863 193128.73629489596 0.7326025864210933 1.086071828622863 1.7909450741159503 1.2622154386012174 1.6628913565585197 1.2065449985936496 1.471968177536793 0.9050366719019791 1.5205145664578505 1.0 17.55920331829901 -10.589570463085389 7.439761443706842 0.9997321162302489 1.303001342422372 0.07205609956135595 0.31388342606383013 0.0013854910475291787 7.643316920311843e-05 0.3019129707434594 0.07316151463130564 2.5729392782366638e-11 10.589570463085389 0.30326922619212315 VNQSALEAVTPS(ph)PSFQQR ddPTM_KYSE-520_SHP099_60min_R1 6 VNQSALEAVTPSPSFQQR 18 0 Q9UKG1 Q9UKG1 APPL1 DCC-interacting protein 13-alpha 1 VNQSALEAVT(0.081)PS(0.879)PS(0.04)FQQR;VNQSALEAVTPS(1)PSFQQR;VNQSALEAVTPS(1)PSFQQR;VNQSALEAVTPS(0.999)PS(0.001)FQQR;VNQSALEAVT(0.005)PS(0.974)PS(0.021)FQQR;VNQSALEAVTPS(1)PSFQQR 286.67 8.268199999999999e-38 4177770000.0 3154990.0 3992670.0 2872140.0 2403710.0 2260620.0 3381200.0 2303200.0 3067420.0 3579900.0 3311810.0 True False 2979976.4153833636 3800856.1400801484 3057282.739986483 2632157.875698236 2438517.9328316716 3360096.6766075417 2536029.9330658456 3056779.83596121 2929880.4019350857 3282469.93994919 0.9078457594129533 1.1579256503835593 0.9313970259949456 0.8018833146538974 0.7428911695896347 1.023648879678561 0.7725980677541563 0.9312438169680624 0.892584077093007 1.0 21.64635036865717 -4.98974215286278 24.615201934633514 0.8730080813460878 1.0358296964072873 0.2528510614289723 0.10293339697909845 205.68242811330202 493555.15919853473 0.025570953620175804 0.053135319861479985 1.0239007170432989e-05 4.98974215286278 0.16282161506119952 VNRNS(ph)GSCLGGDEIFLLCDK ddPTM_KYSE-520_SHP099_60min_R1 2 VNRNSGSCLGGDEIFLLCDK 20 1 E9PKV4;A0A087WVP0;Q2TAM5;E9PKH5;A0A087X0W8;Q04206-2;Q04206-3;Q04206-4;Q04206 E9PKV4 RELA Transcription factor p65 1 VNRNS(0.992)GS(0.008)CLGGDEIFLLCDK;VNRNS(0.712)GS(0.288)CLGGDEIFLLCDK 189.88 3.9241e-13 1958750000.0 1339560.0 1301040.0 1295840.0 1090150.0 1269570.0 1111010.0 1125630.0 1225590.0 1455540.0 1256180.0 True False 1265251.936453344 1238536.0854991453 1379371.9198173063 1193757.5282344506 1369477.9361348243 1104075.7744817652 1239419.665490147 1221338.7143448556 1191250.6271774606 1245051.222493252 1.016224805530201 0.9947671735295678 1.1078836716894853 0.9588019405690922 1.099937023789595 0.8867713669408883 0.9954768471357928 0.9809545922930694 0.9567884482631532 1.0 20.247773666570826 -6.255746103234013 24.999954255930465 0.9647753256257534 1.0330164757085651 0.32971652401790197 0.050921279246482966 586.5525754692478 2575632.9075904917 0.01608884357336154 0.01567410635189562 5.549500524351161e-07 6.255746103234013 0.06824115008281173 VNS(ph)GDTEVGSSLLR ddPTM_KYSE-520_SHP099_60min_R1 5 VNSGDTEVGSSLLR 14 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 VNS(0.996)GDT(0.004)EVGSSLLR;VNS(0.996)GDT(0.004)EVGSSLLR;VNS(0.997)GDT(0.003)EVGSSLLR;VNS(0.998)GDT(0.002)EVGSSLLR;VNS(0.754)GDT(0.246)EVGSSLLR 309.98 2.0833e-42 5313430000.0 2837780.0 2696180.0 2487590.0 2557560.0 2744240.0 3720700.0 3703620.0 4851250.0 5312280.0 4605800.0 True False 2680362.6864258195 2566651.465751314 2647944.031684728 2800629.733441547 2960196.075410277 3697477.731176413 4078018.053447947 4834422.146040256 4347703.863681028 4564996.195258174 0.5871555137789619 0.5622461347103394 0.580053940556455 0.6135010005814817 0.6484553214929597 0.8099629381985283 0.8933234287651611 1.0590199726917504 0.9524003258090651 1.0 22.122182227105533 -6.505175179700032 1.222024424376857 1.00981818870048 0.5763844416118206 0.9714552139529012 0.031081786714301382 0.06421815794655437 0.19592599436107117 0.01670974172971237 0.012108943568754202 3.1248186667544037e-07 6.505175179700032 -0.43343374708865945 VNS(ph)NGKES(ph)PGSSEFFQEAVSHGK ddPTM_KYSE-520_SHP099_60min_R1 3 VNSNGKESPGSSEFFQEAVSHGK 23 1 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 2 VNS(0.991)NGKES(0.903)PGS(0.055)S(0.051)EFFQEAVSHGK;VNS(0.997)NGKES(0.774)PGS(0.184)S(0.045)EFFQEAVSHGK;VNS(1)NGKES(0.833)PGS(0.095)S(0.072)EFFQEAVSHGK 217.12 9.053200000000001e-21 5986300000.0 2340610.0 2239080.0 2125130.0 2748780.0 2612780.0 2551980.0 2790820.0 3261320.0 3242810.0 2700770.0 True False 2210771.697409643 2131511.235872399 2262119.2801282224 3010023.2247491586 2818390.9213153627 2536052.146211085 3072943.321378437 3250007.24211781 2653997.448587703 2676843.2789672627 0.8258876097754098 0.7962779340203827 0.8450697498439123 1.1244674831731045 1.0528785691191864 0.9474040434632783 1.147972817655575 1.2141193575485212 0.9914653836632626 1.0 21.352101245368477 -5.204971049297659 5.772993513369918 1.0748160521496415 0.8160047648567933 0.6880242981470415 0.07584642909769877 0.12338178336544865 9.009905852857397 0.021531262967396714 0.037528265765976045 6.237764159403789e-06 5.204971049297659 -0.2588112872928482 VNS(ph)QPGPQKR ddPTM_KYSE-520_SHP099_60min_R1 2 VNSQPGPQKR 10 1 Q8TF42 Q8TF42 UBASH3B Ubiquitin-associated and SH3 domain-containing protein B 1 VNS(1)QPGPQKR;VNS(1)QPGPQKR 61.375 0.025656 321600000.0 485500.0 385410.0 346940.0 332400.0 359330.0 441640.0 389110.0 443470.0 537140.0 431180.0 True False 458568.3471797442 366894.3250877962 369304.3075236272 363991.1960602961 387607.2266919717 438883.5609419601 428445.03614764265 441931.70607667597 439608.9161974947 427360.0806529634 1.0730256941151304 0.8585133279814493 0.8641525594982272 0.8517201595061336 0.9069804229251985 1.0269643347862298 1.0025387385106759 1.0340968332873968 1.028661627744492 1.0 18.705092627793203 -6.255053150040338 14.27187601892031 1.0195901234702902 0.9020833448884822 0.4412211859492965 0.060116924607508074 1.385350268670124 3092.5355706158502 0.020352208336289774 0.019598595627909932 5.558362284857293e-07 6.255053150040338 -0.11750677858180802 VNS(ph)TTKPEDGGLKK ddPTM_KYSE-520_SHP099_60min_R1 1 VNSTTKPEDGGLKK 14 2 Q9Y4B6;Q9Y4B6-2 Q9Y4B6 VPRBP Protein VPRBP 1 VNS(0.791)T(0.104)T(0.104)KPEDGGLKK 49.993 0.0654 601110000.0 232150.0 222160.0 178280.0 153460.0 173050.0 165450.0 163240.0 168960.0 213070.0 176870.0 True False 219272.17672044836 211487.10013104152 189772.21405808572 168044.7922605684 186668.0504801873 164417.36517943867 179741.89226887314 168373.91719556047 174381.8590576018 175303.06940277785 1.2508176694650264 1.206408426569685 1.0825378854152488 0.9585958353898941 1.0648304739678982 0.9379035161196859 1.0253208508055076 0.9604732978673813 0.9947450415539533 1.0 17.419491731078466 -4.8502734371492835 2.188494512182728 0.9917268780099779 1.2477200213598012 0.8797574552613385 0.034872030677875684 0.09101060264406421 0.8536351489355531 0.009127977601863757 0.028497420432301857 1.4116484735194875e-05 4.8502734371492835 0.25599314334982326 VNSGDT(ph)EVGSSLLR ddPTM_KYSE-520_SHP099_60min_R1 1 VNSGDTEVGSSLLR 14 0 A0A499FJI4;O75592-2;O75592 A0A499FJI4 MYCBP2 E3 ubiquitin-protein ligase MYCBP2 1 VNS(0.298)GDT(0.701)EVGSS(0.001)LLR 110.08 0.005275800000000001 225750000.0 507150.0 500200.0 432480.0 438790.0 516560.0 559690.0 490670.0 785560.0 832410.0 706170.0 True False 479017.3785215397 476169.64118449285 460358.35279246565 480492.46967297606 557210.3331756459 556196.7671035359 540271.7120777258 782835.0757110828 681265.3273484678 699913.8831919465 0.6843947377311452 0.6803260409879691 0.6577357069887061 0.6865022700817099 0.7961127026577851 0.7946645729714763 0.7719116952128809 1.1184734215314824 0.9733559280772767 1.0 19.416817899444684 -6.967019592824204 1.2965205530703363 1.0424783553047723 0.6951589817416582 0.8149073379982305 0.06530977659984963 0.18358384599892513 0.5922445479169758 0.04720103520645569 0.022654351998761105 1.0788980475689848e-07 6.967019592824204 -0.34731937356311404 VNSNGKES(ph)PGSSEFFQEAVSHGK ddPTM_KYSE-520_SHP099_60min_R1 1 VNSNGKESPGSSEFFQEAVSHGK 23 1 Q8N108-17;Q8N108;Q8N108-13;Q8N108-12 Q8N108-17 MIER1 Mesoderm induction early response protein 1 1 VNS(0.008)NGKES(0.961)PGS(0.03)S(0.001)EFFQEAVSHGK 170.44 1.0194e-10 498850000.0 176960.0 158820.0 109190.0 112280.0 131950.0 83802.0 66874.0 76608.0 80501.0 64701.0 True False 167143.67603898555 151190.04880631968 116228.56211017705 122951.05744178692 142333.71430719848 83278.96063322636 73634.27654734509 76342.26472844166 65884.04766506783 64127.79947661626 2.60641527392396 2.3576366262411677 1.8124520575910135 1.9172817162800064 2.219532175887299 1.2986405476706468 1.1482426833341646 1.1904706749882992 1.0273866903711857 1.0 15.968662281990374 -5.919300694446389 0.4856712740584469 0.9055235288958144 2.618051113514823 0.8547277290141553 0.21673758945199956 0.4873074022412126 0.23087569511888759 0.2049839830131234 0.3899022804021643 1.2042018929250196e-06 5.919300694446389 1.7125275846190084 up VNSVT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 VNSVTPK 7 0 Q9UJJ2;Q8ND82 Q9UJJ2 ZNF280C Zinc finger protein 280C 1 VNS(0.002)VT(0.998)PK 124.33 0.011002 733540000.0 2672600.0 3090000.0 2095800.0 1730700.0 2008000.0 2854300.0 2129600.0 2154100.0 2811200.0 3028600.0 True False 2524345.550303983 2941551.7618154436 2230898.6213985654 1895185.2076460721 2166018.1760428543 2836485.254951174 2344880.7508931137 2146627.9298707186 2300756.9445850155 3001768.9602151467 0.8409526461766914 0.9799394293172426 0.7431946465455721 0.6313561212619901 0.7215805762371561 0.9449378991339406 0.7811662995959051 0.7151209697753896 0.7664670316332782 1.0 21.517381509381046 -10.819578298207643 2.456110916412185 1.0753238074428368 0.7909247863637965 0.2790546127167922 0.10046787389655017 23367503.919163126 14814541.779876314 10421730.596643863 0.02840442932158932 1.5150316366184403e-11 10.819578298207643 -0.28439902107904036 VNTLIRPDGEK ddPTM_KYSE-520_SHP099_60min_R1 2 VNTLIRPDGEK 11 1 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 RPL23A 60S ribosomal protein L23a 0 ; 112.43 0.00031731 1219200000.0 732800.0 762700.0 565850.0 491060.0 800590.0 803020.0 614170.0 761580.0 728940.0 733620.0 False True 692150.1231994167 726058.7471639598 602325.5963920106 537730.1947574276 863591.8782660101 798008.0543148546 676256.2973215745 758938.2567341077 596582.8710820301 727120.6975477231 0.9519054065353281 0.9985395129208331 0.8283708584054963 0.7395336105421958 1.1876871077642925 1.0974904950528916 0.9300468266166909 1.0437582911526135 0.8204729601207297 1.0 19.471835336931772 -5.7540913716298085 24.99926099287526 1.0154831352346254 0.8844256594484519 0.25566498865954446 0.11156091963044308 265.697633809695 903946.936215105 0.03490769744044214 0.04414118346499873 1.7616053815861855e-06 5.7540913716298085 -0.13105747578617355 VNTLIRPDGEKK ddPTM_KYSE-520_SHP099_60min_R1 2 VNTLIRPDGEKK 12 2 H7BY10;K7EJV9;K7ERT8;A8MUS3;P62750;K7EMA7 H7BY10 RPL23A 60S ribosomal protein L23a 0 ; 115.78 0.00010083 1204690000.0 2910400.0 2433960.0 1955970.0 1669650.0 2750100.0 2478410.0 1775090.0 2243520.0 2237450.0 2084870.0 False True 2748954.3102614414 2317028.908151559 2082054.9558626548 1828333.0340014207 2966517.224071444 2462941.3238704912 1954533.420408931 2235737.7527615055 1831185.4815245252 2066399.6738043162 1.3303110453944844 1.1212878793606396 1.0075761152388862 0.8847915808249204 1.4355970249501535 1.191899783518707 0.9458641738994106 1.0819483670578751 0.8861719757017028 1.0 20.97868789015321 -6.761345230151884 24.999943327226934 0.9853251449740903 1.1528928668150986 0.2600158567269477 0.1509484911943801 4.253197505338161 1129810.6346859322 0.0636169739438092 0.046064138783780656 1.7324263068078356e-07 6.761345230151884 0.16756772184100832 VNVTVDYIRPAS(ph)PATETVPAFSER ddPTM_KYSE-520_SHP099_60min_R1 2 VNVTVDYIRPASPATETVPAFSER 24 1 Q7KZF4 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 1 VNVTVDYIRPAS(0.99)PAT(0.01)ET(0.001)VPAFSER;VNVTVDYIRPAS(0.988)PAT(0.011)ET(0.001)VPAFSER 138.09 9.5448e-07 5883200000.0 1416440.0 1480920.0 1312600.0 1117660.0 1054590.0 1549300.0 1216040.0 1314040.0 1654010.0 1328330.0 True False 1337867.249596864 1409774.3802937604 1397212.2962342557 1223882.0703632683 1137580.2332037014 1539630.2440163454 1338969.1906067156 1309481.9019392405 1353683.4781990137 1316562.0296251008 1.0161824657648908 1.0707998169256048 1.0612582353086095 0.9296045631148699 0.8640536545988908 1.1694323619941893 1.0170194495036404 0.9946222604582662 1.028195745994956 1.0 20.328344064672706 -6.2616061117085815 24.999999984927044 1.039965689750019 0.9937421636446191 0.11645253835023794 0.07280973894485371 44.82352415704061 6720759.635577631 0.026799019155695134 0.025113948455848276 5.475123102571464e-07 6.2616061117085815 -0.046223526105399815 VNVVQYPELS(ph)DHEFIEEK ddPTM_KYSE-520_SHP099_60min_R1 1 VNVVQYPELSDHEFIEEK 18 0 Q9H1A4;H0Y564 Q9H1A4 ANAPC1 Anaphase-promoting complex subunit 1 1 VNVVQYPELS(1)DHEFIEEK 203.4 4.0029e-10 0.0 266370.0 257660.0 256000.0 224120.0 253290.0 267690.0 259340.0 250070.0 299250.0 246440.0 True False 251593.92510456944 245281.62684445543 272502.1696144827 245420.29741586474 273222.4819770395 266019.24741543614 285556.6181144912 249202.56553677708 244913.7434786092 244256.73332741857 1.03003885165088 1.0041959683283859 1.1156383117971285 1.0047636929905488 1.1185873087510478 1.0890968850338534 1.16908391520864 1.02024849895429 1.0026898343486397 1.0 17.898038807374306 -4.736454528931702 24.999707237615826 1.0700752150667856 1.017117372525222 0.10017902180522464 0.055792044526169655 489.9928048884745 490276.6766982087 0.01428066096661391 0.03774843776769145 1.8346172433296456e-05 4.736454528931702 -0.05295784254156355 VPAAFPTKVPVPGPGS(ph)GGNGPER ddPTM_KYSE-520_SHP099_60min_R1 4 VPAAFPTKVPVPGPGSGGNGPER 23 1 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 VPAAFPTKVPVPGPGS(1)GGNGPER;VPAAFPTKVPVPGPGS(1)GGNGPER;VPAAFPTKVPVPGPGS(1)GGNGPER;VPAAFPTKVPVPGPGS(1)GGNGPER 176.78 5.1183999999999994e-11 14487650000.0 7832300.0 7774100.0 7497300.0 5083700.0 5491900.0 6154800.0 4134780.0 5032110.0 8667900.0 5460620.0 True False 7397826.705697036 7400620.566838005 7980587.954104141 5566853.319529869 5924081.285363422 6116385.610192869 4552763.913964046 5014654.784913298 7094027.859977412 5412243.155098074 1.3668688737180328 1.3673850850302196 1.4745434980294279 1.0285667439546131 1.0945704240548062 1.1301017775654676 0.8411972233131396 0.9265390783837443 1.310737093047118 1.0 22.367795225854792 -5.267632310802985 24.7571260481405 1.04114771627156 1.3993777515855397 0.6446799383504469 0.12088931387467522 264.699777267586 1058175.1576471743 0.03458660950570943 0.05280144509723472 5.399675848622172e-06 5.267632310802985 0.35823003531397957 VPAKLS(ph)PMK ddPTM_KYSE-520_SHP099_60min_R1 2 VPAKLSPMK 9 1 A0A494C1F2;P35658-2;P35658;P35658-5;P35658-4;P35658-3;A0A0A0MSW3 A0A494C1F2 NUP214 Nuclear pore complex protein Nup214 1 VPAKLS(1)PMK;VPAKLS(1)PMK 83.226 0.011118000000000001 10001400000.0 4951700.0 4442700.0 3533500.0 3178700.0 2886700.0 4167800.0 3529800.0 3563300.0 3969700.0 3565600.0 True False 4677019.330030775 4229266.023371346 3761275.063799892 3480802.6922889943 3113866.8669237625 4141787.2142330892 3886626.6315282257 3550939.7439804687 3248902.547993438 3534011.5579948244 1.323430683029369 1.1967323688581837 1.0643075162815867 0.9849437771120306 0.8811139453914381 1.171978966753327 1.0997775665831362 1.0047900765766735 0.9193242564936162 1.0 21.752875327559643 -4.602937861082069 2.00766516258467 1.01444874932917 1.3296725761724155 0.634540394554097 0.077909150578048 0.2808836130741314 1.9340932291651107 0.023146479490631835 0.1266303132388357 2.4949516794568048e-05 4.602937861082069 0.31522382684324546 VPAQANGT(ph)PTTK ddPTM_KYSE-520_SHP099_60min_R1 3 VPAQANGTPTTK 12 0 I3L1L3;Q9BQG0;Q9BQG0-2 I3L1L3 MYBBP1A Myb-binding protein 1A 1 VPAQANGT(0.999)PT(0.001)TK;VPAQANGT(0.98)PT(0.019)T(0.002)K;VPAQANGT(0.91)PT(0.082)T(0.008)K 136.33 0.00020092 1723310000.0 2352100.0 2532450.0 1972510.0 1827070.0 1846940.0 2686280.0 2092130.0 2786190.0 2603990.0 2990940.0 True False 2221624.324204898 2410787.300715054 2099661.1507275873 2000714.1834713742 1992283.6703488992 2669513.930095028 2303622.917621156 2776525.357191636 2131171.057245995 2964442.5985161103 0.7494239643287276 0.8132346033354818 0.7082819386614534 0.6749040053846403 0.6720601273730725 0.9005112567979179 0.7770846764832836 0.9366095867673273 0.7189112240907548 1.0 21.499329430940435 -6.263943530829454 24.99912028712851 0.8570652826422968 0.725007469356638 0.42669106451932537 0.08252414492501484 237.40011540685583 2369970.3107766584 0.027478308434596303 0.025360487025819067 5.445734564411638e-07 6.263943530829454 -0.1320578132856588 VPAS(ph)PLPGLER ddPTM_KYSE-520_SHP099_60min_R1 4 VPASPLPGLER 11 0 E7ETY4;E9PC69;Q7KZI7-13;Q7KZI7-15;Q7KZI7-16;Q7KZI7-14;Q7KZI7-10;Q7KZI7-2;Q7KZI7-5;Q7KZI7-9;Q7KZI7-12;Q7KZI7-6;Q7KZI7-11;Q7KZI7;Q7KZI7-7;Q7KZI7-4;Q7KZI7-3;Q7KZI7-8 E7ETY4;Q7KZI7-10 MARK2 Serine/threonine-protein kinase MARK2 1 VPAS(1)PLPGLER;VPAS(1)PLPGLER;VPAS(1)PLPGLER;VPAS(1)PLPGLER 150.51 5.4971000000000006e-05 17904800000.0 4187660.0 4278030.0 3575940.0 2732240.0 2994070.0 4178440.0 3137510.0 3652980.0 3962530.0 4327030.0 True False 3955362.1519067492 4072507.0173460566 3806450.8141062935 2991911.2681220905 3229686.2750720293 4152360.8060463807 3454680.1299467725 3640308.6649919422 3243034.4392524404 4288695.880578404 0.9222762028473096 0.9495910017282011 0.8875543801890957 0.6976272861107092 0.7530695495798249 0.9682105986695339 0.8055316175696864 0.8488148300459543 0.7561819559038216 1.0 22.032107584729363 -5.0064255982605115 23.74649381582153 0.8249659939102856 0.9315934490320098 0.17778622110347153 0.08867276591046969 236.83712832575566 875282.768669706 0.023206909693057883 0.045659034126814255 9.853134286323777e-06 5.0064255982605115 0.10662745512172422 VPASETS(ph)PGPPPMGPPPPSSK ddPTM_KYSE-520_SHP099_60min_R1 2 VPASETSPGPPPMGPPPPSSK 21 0 Q9HD15 Q9HD15 SRA1 Steroid receptor RNA activator 1 1 VPASET(0.001)S(0.999)PGPPPMGPPPPSSK;VPASET(0.004)S(0.996)PGPPPMGPPPPSSK 350.19 2.9612999999999996e-62 0.0 546830.0 727670.0 447410.0 420330.0 445590.0 698160.0 462070.0 641380.0 671690.0 718130.0 True False 516496.24982142064 692711.6409450622 476250.764481311 460278.036823177 480655.39793970867 693802.5244706974 508780.54496862367 639155.2024792176 549728.0279269742 711767.9268966852 0.7256526043163383 0.973226826846907 0.6691096163292561 0.6466686955536105 0.6752979163241742 0.974759466186799 0.7148124068850806 0.8979825843880607 0.7723416680543524 1.0 19.441047399206944 -6.244209953045397 24.987607727546603 0.8557802223372887 0.742159565497248 0.24205238092263748 0.1166877100913887 1474.0345915585417 2137774.366151436 0.039079188873763625 0.0389862379580948 5.698887016724305e-07 6.244209953045397 -0.11362065684004063 VPCNVEGIS(ph)PELEK ddPTM_KYSE-520_SHP099_60min_R1 12 VPCNVEGISPELEK 14 0 Q86VQ1;H7C2L5;H7C0B2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK;VPCNVEGIS(1)PELEK 243.86 1.5686000000000003e-18 18840090000.0 11709520.0 12192530.0 9165710.0 7797590.0 8626140.0 11452720.0 8863490.0 11229530.0 12908830.0 11800040.0 True False 11059969.583250603 11606782.557439372 9756546.332254523 8538670.609169085 9304968.141977245 11381239.32630923 9759498.068526305 11190577.381422006 10564911.877122726 11695500.825892214 0.9456601942830329 0.9924143249807283 0.8342136414248191 0.7300816558676696 0.7956023671408187 0.9731297099404882 0.8344660236285164 0.9568275483036709 0.9033312924687654 1.0 23.479450306454293 -7.896939592149643 0.8664321304555465 0.9950944633915956 0.868825330288489 0.18325850983042014 0.07955450655148981 1.1037702848316546 1.8712549716587905 0.08342249518728863 0.030249436410291562 1.2678282011632748e-08 7.896939592149643 -0.1262691331031066 VPDEEENEES(ph)DNEKETEK ddPTM_KYSE-520_SHP099_60min_R1 8 VPDEEENEESDNEKETEK 18 1 P11388;P11388-2;P11388-3;P11388-4 P11388 TOP2A DNA topoisomerase 2-alpha 1 VPDEEENEES(1)DNEKETEK;VPDEEENEES(0.998)DNEKET(0.002)EK;VPDEEENEES(1)DNEKETEK;VPDEEENEES(1)DNEKETEK;VPDEEENEES(1)DNEKETEK;VPDEEENEES(1)DNEKETEK;VPDEEENEES(1)DNEKETEK;VPDEEENEES(1)DNEKETEK 190.87 1.0941e-12 37393450000.0 26593210.0 25363030.0 20524870.0 26647040.0 24345000.0 24517770.0 28483960.0 27187670.0 26411880.0 26506570.0 True False 25118031.629050177 24144551.96811582 21847935.961153124 29179566.66987528 26260812.995898046 24364745.503025 31363396.65346046 27093362.31841986 21616148.38131264 26271742.41159943 0.9560854866619022 0.919031238577293 0.8316135115388038 1.110682581030179 0.9995839858837623 0.9274126215651208 1.1938072535155864 1.0312739023528819 0.8227908161800769 1.0 24.647008551215702 -5.254803529912098 24.99895266444438 1.017030468774337 0.9039221992500817 0.21027124275086984 0.09734284364939699 848.9880624392969 3198347.127084802 0.026978400922239455 0.04540568589393599 5.56155799187723e-06 5.254803529912098 -0.11310826952425534 VPDS(ph)PENELK ddPTM_KYSE-520_SHP099_60min_R1 6 VPDSPENELK 10 0 A0A0X1KG69;A0A087WUZ6;A0A2R8Y549;Q8NI35-4;Q8NI35-3;Q8NI35-2;Q8NI35;A0A0U1RR46 A0A0X1KG69 INADL InaD-like protein 1 VPDS(1)PENELK;VPDS(1)PENELK;VPDS(1)PENELK;VPDS(1)PENELK;VPDS(1)PENELK;VPDS(1)PENELK 219.74 3.2069999999999998e-09 6519430000.0 11705500.0 10426300.0 8872100.0 8620900.0 10011500.0 11078300.0 9967000.0 10896300.0 12029100.0 10984400.0 True False 11056172.580664255 9925404.897804648 9444009.761861905 9440227.7440319 10799348.0923571 11009156.220413256 10974561.628546055 10858503.278515542 9844918.668934138 10887086.761733878 1.0155308598737987 0.9116676586697768 0.8674505832961555 0.8671031976352551 0.9919410333271924 1.0112123161458058 1.0080347358964417 0.997374551719492 0.9042748427005496 1.0 23.376114624081687 -5.782108679874872 24.926536823914322 0.9877567269754208 0.9117410823442524 0.3377112412322516 0.04787171721007763 262.2919794513761 316314.4647428912 0.01550919329627722 0.017604747920768347 1.6515484553314168e-06 5.782108679874872 -0.07601564463116839 VPEASSEPFDTSS(ph)PQAGR ddPTM_KYSE-520_SHP099_60min_R1 2 VPEASSEPFDTSSPQAGR 18 0 Q9H4I2;H0Y6F5 Q9H4I2 ZHX3 Zinc fingers and homeoboxes protein 3 1 VPEASSEPFDTS(0.021)S(0.979)PQAGR;VPEASSEPFDTS(0.006)S(0.994)PQAGR 174.39 1.1568e-08 1634170000.0 959180.0 1073620.0 928250.0 747310.0 825380.0 973180.0 824940.0 984440.0 1083700.0 1070860.0 True False 905972.3733220757 1022041.6836635246 988086.4802525135 818334.117713055 890332.710230204 967106.0226372075 908332.9858385451 981025.2074100239 886927.3978538652 1061373.0135164731 0.853585272834916 0.9629429716489225 0.9309511996907183 0.7710146266125637 0.8388499602796671 0.9111839196222389 0.8558093848920414 0.924298239089153 0.8356415572649186 1.0 20.0175003416705 -10.488755088830914 2.7046868149153616 1.0050324317136852 0.8778788726014316 0.32153326442099195 0.05396389001961267 17962513.474524714 18589552.917118024 676430.2028536956 0.014400798424457748 3.245225733850798e-11 10.488755088830914 -0.12715355911225357 VPEEDLKR ddPTM_KYSE-520_SHP099_60min_R1 2 VPEEDLKR 8 1 Q99832-3;Q99832;Q99832-2;Q99832-4 Q99832-3 CCT7 T-complex protein 1 subunit eta 0 ; 128.38 0.0020358 936720000.0 936660.0 862640.0 650540.0 499870.0 806070.0 787690.0 527240.0 614660.0 751270.0 683670.0 False True 884701.6026145809 821197.4795509625 692474.8493008026 547377.4945086042 869503.123089076 782773.7345312302 580538.5645665319 612527.887922722 614858.3059755211 677613.2156872108 1.3056144451334948 1.2118970830846822 1.0219323255059594 0.8078022710248851 1.2831850131601366 1.1551925440789543 0.8567403219516176 0.9039491464190503 0.9073883031516056 1.0 19.37010248668141 -1.000000000004466 0.4849998150022412 0.9651720439025024 11.276220332997791 0.3731657525723555 0.13661427730448697 118.13920107248026 1.3100038855354126 0.08460803789267242 1231.1363982574617 0.09999999999897168 1.000000000004466 10.31104828909529 VPEPCHPK ddPTM_KYSE-520_SHP099_60min_R1 3 VPEPCHPK 8 0 P22528;P35321 P22528 SPRR1B;SPRR1A Cornifin-B;Cornifin-A 0 ;; 82.45200000000001 0.013985 544180000.0 755520.0 620890.0 504050.0 390700.0 606710.0 655610.0 415260.0 533490.0 561760.0 596150.0 False True 713609.7995082202 591061.5124251092 536541.8695085144 427832.01053176133 654454.625292311 651518.0948038192 457238.5333470483 531639.4477075018 459758.5448171881 590868.5747976818 1.2077301619104823 1.00032653221995 0.908056194547545 0.7240730490333734 1.1076145410447689 1.1026446871487527 0.7738413461971818 0.8997592195346309 0.7781062734206388 1.0 19.172477746002254 -6.768161684379353 24.999956518259367 0.854573322732052 0.9950639022271841 0.20996406670984713 0.1364030397619544 288.0357172658851 1071179.9612015022 0.05888712669800035 0.04071649153690954 1.7054473463252687e-07 6.768161684379353 0.1404905794951321 VPFAPGPS(ph)PPPLLGNMDQER ddPTM_KYSE-520_SHP099_60min_R1 2 VPFAPGPSPPPLLGNMDQER 20 0 O75420 O75420 GIGYF1 PERQ amino acid-rich with GYF domain-containing protein 1 1 VPFAPGPS(1)PPPLLGNMDQER;VPFAPGPS(1)PPPLLGNMDQER 126.19 3.6189e-05 281680000.0 204287.0 197562.0 142541.0 142824.0 130168.0 211680.0 137859.0 203005.0 203503.0 192093.0 True False 192954.79287396185 188070.82497339207 151729.42093366396 156397.95001839855 140411.4810453916 210358.82660129087 151795.13309418393 202300.8230367231 166551.98509315756 190391.20546609265 1.0134648415171978 0.9878125647294469 0.7969350294422393 0.8214557475778572 0.7374893220600881 1.1048768039800783 0.7972801722777977 1.0625534017785894 0.8747882271422422 1.0 17.538607313778634 -6.257475118253957 24.987584760975885 0.9611455831543207 0.8709820015132643 0.15408363150830018 0.11245807909224458 750.6175656279606 4731314.293732775 0.03822025304314105 0.0368357283346493 5.527450750946918e-07 6.257475118253957 -0.09016358164105642 VPFS(ph)PGPAPPPHMGELDQER ddPTM_KYSE-520_SHP099_60min_R1 5 VPFSPGPAPPPHMGELDQER 20 0 I1E4Y6;Q6Y7W6;Q6Y7W6-3;Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 I1E4Y6;Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 VPFS(1)PGPAPPPHMGELDQER;VPFS(1)PGPAPPPHMGELDQER;VPFS(1)PGPAPPPHMGELDQER;VPFS(1)PGPAPPPHMGELDQER;VPFS(1)PGPAPPPHMGELDQER 209.41 8.3267999999999985e-19 4874180000.0 1872410.0 1746420.0 1650560.0 1396380.0 1629890.0 1886030.0 1731940.0 1915380.0 2327430.0 2138890.0 True False 1768543.6847432053 1662519.3617701354 1756957.738589374 1529091.535363044 1758153.0701944644 1874258.587182695 1907021.3973055137 1908735.9938330508 1904827.3817357377 2119941.098631242 0.8342418975154926 0.7842290348743912 0.8287766767311455 0.7212896322215343 0.8293405280597801 0.8841088030194925 0.8995633881228108 0.900372182541035 0.8985284463637249 1.0 21.015592750200803 -6.300299348209948 2.2807528974773454 0.9153737371446623 0.7929089876093163 0.6839297044257667 0.04068986640926396 0.18756694620748815 1.9173381793965678 0.015576158657189896 0.013997746977211106 5.008418969638086e-07 6.300299348209948 -0.12246474953534603 VPGEDGTLPPTQGS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 1 VPGEDGTLPPTQGSPLR 17 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VPGEDGTLPPT(0.05)QGS(0.95)PLR 112.82 0.00015686 0.0 306080.0 257470.0 283060.0 265770.0 223520.0 243320.0 276580.0 246510.0 307520.0 300430.0 True False 289101.13224464725 245100.7547296508 301306.50051201327 291028.70089333615 241109.75234516873 241801.34962502896 304539.40556067706 245654.91434586633 251682.1199483438 297768.4239310029 0.9708925091118326 0.8231254056220685 1.0118819736972184 0.9773658907526459 0.8097223646555527 0.8120449657921341 1.0227390854284908 0.824986447867246 0.8452276995181398 1.0 18.183831249668348 -5.73912136102148 24.99616125280555 0.8801965685866417 0.9417717550227777 0.10755796916067806 0.0834630724126375 564.4548029811908 632186.1591775923 0.024673765907335665 0.0318294206300373 1.823386096671494e-06 5.73912136102148 0.06157518643613591 VPGEQGS(ph)DEEHCK ddPTM_KYSE-520_SHP099_60min_R1 3 VPGEQGSDEEHCK 13 0 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 VPGEQGS(1)DEEHCK;VPGEQGS(1)DEEHCK;VPGEQGS(1)DEEHCK 114.73 0.00013476 1440760000.0 1314740.0 1137280.0 1112990.0 1040800.0 1149970.0 1176130.0 1166180.0 1102320.0 1291050.0 1145070.0 True False 1241808.751330788 1082643.3617079183 1184735.1162469636 1139717.3190720691 1240466.096565738 1168789.336406727 1284068.8552200082 1098496.309203423 1056627.8647220002 1134925.5706509803 1.0941763790012244 0.9539333588958847 1.043887940217448 1.0042220816457068 1.0929933456818854 1.0298378736293015 1.131412392517935 0.9679016295080374 0.9310107129896902 1.0 20.11416625681953 -7.482249092413547 24.639056704635312 0.9601555796270727 1.0455564033206626 0.36979588895285875 0.04977507595755289 421.654496654852 255705.0695495306 0.02650685443529184 0.012730575276260446 3.294207165967577e-08 7.482249092413547 0.08540082369358992 VPGEQGS(ph)DEEHCKEHR ddPTM_KYSE-520_SHP099_60min_R1 1 VPGEQGSDEEHCKEHR 16 1 Q9UNS1-2;Q9UNS1 Q9UNS1-2 TIMELESS Protein timeless homolog 1 VPGEQGS(1)DEEHCKEHR 178.32 9.04e-09 1050600000.0 683900.0 591170.0 745020.0 578000.0 565060.0 514110.0 509710.0 388140.0 772340.0 504070.0 True False 645962.7036791496 562769.30583574 793045.1812741478 632932.9462179638 609527.0072483947 510901.2487905782 561236.4610902179 386793.63293255714 632102.525106998 499604.3319605262 1.2929485642053784 1.1264299963680147 1.5873464870933234 1.2668684111169235 1.2200194599124363 1.022611727135594 1.1233618789649753 0.7741999181926985 1.265206253569756 1.0 18.93042646073191 -6.089177325176836 2.1459620386743343 1.0234384678711128 1.3247945595632444 0.422568982387004 0.15601878433966285 0.30368993593191534 2.7678246020690636 0.05668013460977471 0.05849328123623035 8.143717030239516e-07 6.089177325176836 0.3013560916921316 VPGGS(ph)PLGVSLVYSDKK ddPTM_KYSE-520_SHP099_60min_R1 2 VPGGSPLGVSLVYSDKK 17 1 I3L2J0;A0A0A0MQR4;Q96RK0 I3L2J0 CIC Protein capicua homolog 1 VPGGS(1)PLGVSLVYSDKK;VPGGS(1)PLGVSLVYSDKK 156.87 7.6463e-07 2438500000.0 3391100.0 3216400.0 2938000.0 2610500.0 2735700.0 2955300.0 2867400.0 3354200.0 4312800.0 3170200.0 True False 3202988.923009745 3061879.316085172 3127388.1809662087 2858601.1351245563 2950984.025996236 2936854.876487124 3157264.7751272162 3342565.0630761627 3529704.236840586 3142114.4943782794 1.019373714338029 0.9744645911418376 0.9953132473567026 0.9097698827458478 0.9391713864265593 0.9346746853883281 1.0048216832251158 1.0637948009394693 1.123353156976222 1.0 21.583304320759034 -7.106231644899772 3.1266281630687263 1.0705660097773657 0.9610365064011065 0.5455103741931598 0.040641766702405976 0.1908295784485966 3.52642322243357 0.021992442905360274 0.011794752748541519 7.830118868452377e-08 7.106231644899772 -0.10952950337625922 VPGS(ph)SGHLHK ddPTM_KYSE-520_SHP099_60min_R1 2 VPGSSGHLHK 10 0 Q9UEW8-2;Q9UEW8 Q9UEW8-2 STK39 STE20/SPS1-related proline-alanine-rich protein kinase 1 VPGS(0.741)S(0.259)GHLHK;VPGS(0.5)S(0.5)GHLHK 129.84 0.00024211 1733420000.0 688070.0 638660.0 627500.0 1288470.0 529440.0 610170.0 567180.0 540660.0 579620.0 647270.0 True False 649901.385466461 607977.8149517959 667949.6540354984 1410925.80140737 571103.9158984709 606361.7026989307 624516.0895433682 538784.5766509932 474375.61903115007 641535.69136844 1.0130401070596342 0.9476913336730137 1.041173021271374 2.199294318914303 0.8902137848016947 0.9451722029767654 0.9734705300826398 0.8398357003360614 0.7394376110536797 1.0 19.291170005266768 -5.911058453822739 24.4234430459638 0.8958895143218876 1.292620097502776 0.25574278046314736 0.33606543171649866 26.450405537367924 7255.597460954772 0.10920600626428899 0.12382796962444695 1.227274035214284e-06 5.911058453822739 0.3967305831808884 VPIT(ph)PENPCK ddPTM_KYSE-520_SHP099_60min_R1 1 VPITPENPCK 10 0 Q5W0B1 Q5W0B1 RNF219 RING finger protein 219 1 VPIT(1)PENPCK 100.04 0.010112000000000001 353720000.0 853760.0 890350.0 712920.0 580270.0 719320.0 924560.0 700550.0 887130.0 1056300.0 991450.0 True False 806400.2308716343 847576.2495574044 758875.9639123313 635418.6863354632 775926.3916290563 918789.4780918821 771368.4307091336 884052.7530876988 864502.5471560744 982666.5243364291 0.8206245057713519 0.8625268375044649 0.7722619475867277 0.6466269793453543 0.7896131316297974 0.9349962121812568 0.7849747718128691 0.8996467582781231 0.8797517018704306 1.0 19.906342384074865 -6.161533586886657 6.5769410234771355 0.886130384994701 0.7742415773854275 0.40880777404121005 0.07220415996547024 0.2935489078320356 16.498161544615563 0.024893044394244026 0.02491569874939738 6.893922758100874e-07 6.161533586886657 -0.11188880760927344 VPKPEPIPEPKEPS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 13 VPKPEPIPEPKEPSPEK 17 2 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK;VPKPEPIPEPKEPS(1)PEK 176.54 1.0542000000000001e-08 154264900000.0 50700500.0 51848270.0 48590370.0 30589810.0 34609270.0 41454950.0 31204910.0 34769010.0 59803770.0 39893800.0 True False 47888042.196059026 49357401.28336012 51722582.997540876 33497056.345238242 37332822.6491906 41196214.28011709 34359406.833373405 34648404.419457905 48944912.89835838 39540371.96890672 1.2111176453705756 1.2482786282884035 1.3080955090208521 0.8471608808227512 0.9441697381741357 1.041877256807611 0.8689702479377922 0.8762791722522059 1.2378465467357538 1.0 25.236823107235484 -5.253410537838907 24.994754296745615 0.9658419966803703 1.2550754136567257 0.5860996618722314 0.10848261314141616 410.3868801734188 1277581.4974577508 0.029233477350376756 0.0495349418441057 5.579425232494655e-06 5.253410537838907 0.2892334169763554 VPKPEPIPEPKEPS(ph)PEKNSK ddPTM_KYSE-520_SHP099_60min_R1 1 VPKPEPIPEPKEPSPEKNSK 20 3 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 VPKPEPIPEPKEPS(0.989)PEKNS(0.011)K 55.468999999999994 0.064864 858470000.0 351920.0 395670.0 443420.0 181500.0 229670.0 232710.0 115350.0 151630.0 466190.0 184000.0 True False 332398.2960648726 376661.4192872223 472003.56269708526 198749.70543003542 247743.72235645534 231257.57057060854 127010.70370751337 151104.0309207082 381541.6476935437 182369.90314983396 1.822659826669844 2.0653705067648125 2.5881658900114135 1.0898163677081296 1.35846824545885 1.2680687250275544 0.6964455291899901 0.8285579380746947 2.0921305604909572 1.0 17.476508132891365 -5.27475589349296 24.896894772951796 1.1730000608264737 2.1493959161934906 0.5549081199052861 0.3971355665786295 523.9009465841002 979497.5208069684 0.11264294652908682 0.16819106094968356 5.311829255148256e-06 5.27475589349296 0.9763958553670169 VPLAPITDPQQLQLS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 8 VPLAPITDPQQLQLSPLK 18 0 P31350;P31350-2;A0A286YFD6 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK;VPLAPITDPQQLQLS(1)PLK 293.2 5.467799999999999e-38 41688120000.0 6068980.0 8163300.0 5740990.0 4982270.0 4882740.0 7804620.0 5128570.0 6358750.0 7244900.0 7298780.0 True False 5732321.581188311 7771122.814636888 6111063.401308782 5455783.44282591 5266983.859009708 7755908.47160321 5647015.905619782 6336692.9803934125 5929408.789066595 7234118.487564912 0.7924008420710671 1.0742321718942065 0.8447557794102204 0.7541739124406281 0.7280754203934301 1.0721290347863708 0.7806087106987147 0.875945423244846 0.8196449642425614 1.0 22.78638579740113 -8.939365315149363 14.61335189697953 0.9999999995645019 0.8634064664889399 0.11656924137358349 0.11514175662386383 0.0 0.0 0.11101044476715553 0.026923987607163392 1.149832778101432e-09 8.939365315149363 -0.136593533075562 VPLAPITDPQQLQLS(ph)PLKGLSLVDKENTPPALSGTR ddPTM_KYSE-520_SHP099_60min_R1 2 VPLAPITDPQQLQLSPLKGLSLVDKENTPPALSGTR 36 2 P31350;P31350-2;A0A286YFD6 P31350 RRM2 Ribonucleoside-diphosphate reductase subunit M2 1 VPLAPITDPQQLQLS(0.998)PLKGLS(0.002)LVDKENTPPALSGTR;VPLAPITDPQQLQLS(0.993)PLKGLS(0.007)LVDKENTPPALSGTR 145.17 5.9607e-07 435520000.0 173923.0 386040.0 398770.0 128811.0 150752.0 223113.0 93154.0 115076.0 352570.0 123569.0 True False 164275.14448309515 367494.058942147 424475.3522545592 141053.15871156068 162615.3247384523 221720.46900743476 102570.91541542888 114676.8282149403 288552.1755664269 122474.2747952274 1.3413032635445878 3.0005816287263913 3.4658327470341574 1.1516962149593988 1.3277508685831314 1.8103431874011375 0.8374894694165268 0.9363340048894011 2.356022732519754 1.0 16.902119223478056 -5.27997977002088 24.960223314361183 1.3404510607745626 2.642373494708925 0.4340503857449366 0.6572172090964011 696.7263927869111 937974.6380558605 0.1845885179390153 0.27434045700287546 5.24831907005792e-06 5.27997977002088 1.3019224339343625 VPLDLS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 VPLDLSPR 8 0 R4GNG2;Q9UKV5 R4GNG2 AMFR E3 ubiquitin-protein ligase AMFR 1 VPLDLS(1)PR;VPLDLS(1)PR;VPLDLS(1)PR;VPLDLS(1)PR 115.42 0.0010164 969590000.0 799140.0 867820.0 769120.0 829310.0 762950.0 1000410.0 1095660.0 1237080.0 1514070.0 984130.0 True False 754810.1111539048 826128.6245756244 818698.7058355111 908127.3730588566 822989.8244083155 994166.0701067526 1206420.005411134 1232788.858216643 1239153.0545986912 975411.3738415551 0.7738377174967364 0.8469540613638773 0.8393368457568342 0.9310198726536194 0.8437361368537837 1.0192274734211209 1.2368320052079933 1.2638655763889997 1.2703902044102862 1.0 19.895651269538845 -6.529225374633219 2.6661009179155357 1.215768168034599 0.8506361631281278 0.7977717261010746 0.08152978937519463 0.1125946189373108 1.6181431811522164 0.0328037482887713 0.025687085486126436 2.9564778211612634e-07 6.529225374633219 -0.36513200490647124 VPLS(ph)PLSLLAGPADAR ddPTM_KYSE-520_SHP099_60min_R1 6 VPLSPLSLLAGPADAR 16 0 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 1 VPLS(0.966)PLS(0.034)LLAGPADAR;VPLS(1)PLSLLAGPADAR;VPLS(0.955)PLS(0.045)LLAGPADAR;VPLS(0.983)PLS(0.017)LLAGPADAR;VPLS(0.997)PLS(0.003)LLAGPADAR;VPLS(0.999)PLS(0.001)LLAGPADAR 178.14 4.9012e-09 1522571000.0 148290.0 153249.0 139895.0 142476.0 132274.0 171838.0 137468.0 199589.0 220098.0 196941.0 True False 140064.05809121378 145886.6880085613 148912.85553991422 156016.87620302857 142683.21126389084 170765.4953019305 151364.60699839136 198896.6723434229 180133.75141906436 195196.25595777942 0.7175550443012051 0.7473846631572498 0.7628878679523637 0.7992821144928862 0.7309730945595235 0.8748400140362669 0.7754483110123344 1.0189574147694915 0.9228340499421616 1.0 17.574565855396283 -7.066616487461094 0.9407651447562471 1.0000986647087584 0.7513994088924342 0.7605166036291432 0.05194732393981639 0.25924991366349054 0.41954897153932535 0.04135815131226187 0.018979714779561205 8.577950041219977e-08 7.066616487461094 -0.24869925581632424 VPLS(ph)PLSLLAGPADARR ddPTM_KYSE-520_SHP099_60min_R1 2 VPLSPLSLLAGPADARR 17 1 Q53ET0;H0YDQ8;Q5T4K5 Q53ET0 CRTC2 CREB-regulated transcription coactivator 2 1 VPLS(0.991)PLS(0.009)LLAGPADARR;VPLS(1)PLSLLAGPADARR 213.64 3.6438e-18 286810000.0 170507.0 178426.0 168546.0 121061.0 160244.0 167578.0 144495.0 177484.0 227600.0 176705.0 True False 161048.6368127223 169854.147137114 179410.744843135 132566.60104168317 172854.29113635994 166532.08354209707 159101.9647353026 176868.34942907703 186273.57732909417 175139.53117440979 0.9195447523057756 0.9698218671601191 1.0243874905915547 0.7569199263738403 0.986951889029701 0.9508537702790746 0.9084297740689026 1.0098710910271058 1.0635724332480754 1.0 17.418145229210253 -7.385496699328792 4.675108616343752 1.033046267939846 0.9324894797533915 0.28368876962810585 0.06844205973687321 0.3000834886934138 10.025158589358625 0.03983399604626649 0.018088010867980696 4.116264756835078e-08 7.385496699328792 -0.10055678818645453 VPLSNENSQVPQS(ph)PEDWR ddPTM_KYSE-520_SHP099_60min_R1 2 VPLSNENSQVPQSPEDWR 18 0 Q8IZT6-2;Q8IZT6 Q8IZT6-2 ASPM Abnormal spindle-like microcephaly-associated protein 1 VPLSNENSQVPQS(1)PEDWR;VPLSNENSQVPQS(1)PEDWR 176.69 8.5488e-09 613830000.0 194240.0 196969.0 178229.0 180948.0 211045.0 213056.0 198548.0 200743.0 238440.0 215669.0 True False 183465.11999215983 187506.31358350342 189717.92651648287 198145.2435160002 227653.04081820915 211726.2384748898 218619.1694817456 200046.6693867686 195145.30658325672 213758.34044794278 0.8582828609526918 0.8771882921179742 0.8875346155799962 0.9269591216921667 1.0650019098255967 0.9904934611262672 1.0227398333258795 0.935854334233506 0.9129248766355437 1.0 17.705621186777503 -5.527661666574869 6.052031240523263 0.987547848624688 0.879210149860752 0.617315160421481 0.040245331151703444 0.11162700669502397 16.60722379379289 0.012797432658324566 0.017407583443335387 2.9671420161408996e-06 5.527661666574869 -0.10833769876393606 VPLSNENSQVPQS(ph)PEDWRK ddPTM_KYSE-520_SHP099_60min_R1 2 VPLSNENSQVPQSPEDWRK 19 1 Q8IZT6-2;Q8IZT6 Q8IZT6-2 ASPM Abnormal spindle-like microcephaly-associated protein 1 VPLSNENSQVPQS(1)PEDWRK;VPLSNENSQVPQS(1)PEDWRK 165.47 6.8178e-09 1770460000.0 2097100.0 2159600.0 2033270.0 2006300.0 2032090.0 2326900.0 2051210.0 1991220.0 2637400.0 2197000.0 True False 1980769.6825347932 2055849.574374315 2164337.8375470266 2196978.148783909 2192003.921989503 2312376.953980269 2258566.324680441 1984312.9225742402 2158514.643443557 2177536.2892401377 0.9096379666884875 0.9441172505518676 0.9939388143571574 1.0089283745303532 1.0066440374935903 1.0619234983161565 1.0372117956613156 0.9112651450996834 0.9912646021604451 1.0 21.05426533125763 -4.62319260592431 2.259587724095146 1.0030996365070686 0.9096196842527963 0.4172334264328974 0.03644652329597034 0.36736853011775694 3.397636440374288 0.010917772154879421 0.0505684260827845 2.381263165100253e-05 4.62319260592431 -0.0934799522542723 VPLSVQLKPEVS(ph)PTQDIR ddPTM_KYSE-520_SHP099_60min_R1 1 VPLSVQLKPEVSPTQDIR 18 1 A6PVJ6;A6PVJ7;Q5JWR1;H0Y4S7;B4DML5;G3XAG9;Q9BYM8 A6PVJ6 RBCK1 RanBP-type and C3HC4-type zinc finger-containing protein 1 1 VPLSVQLKPEVS(0.972)PT(0.028)QDIR 97.97399999999999 0.00056325 170890000.0 148360.0 146020.0 100560.0 82619.0 114260.0 147350.0 114960.0 127130.0 154250.0 147440.0 True False 140130.1750516723 139004.98001951148 107042.25850168882 90471.08491969189 123251.61194953024 146430.33399329285 126581.27870148032 126689.01570236504 126242.08832606678 146133.7963065841 0.9589169555116711 0.9512171963827137 0.7324948862419035 0.6190976160633397 0.8434162053174357 1.0020292204418384 0.8662012614516411 0.8669385104905882 0.8638801667836977 1.0 17.156930342690337 -6.011135579712732 24.715621375046656 0.9097629344333628 0.8082128840439984 0.18490568368773974 0.10351440712361783 926.5710107835479 2056544.7600224433 0.03656003986622997 0.03878053420516507 9.746853092281978e-07 6.011135579712732 -0.10155005038936438 VPLVAEKPLKEPK ddPTM_KYSE-520_SHP099_60min_R1 1 VPLVAEKPLKEPK 13 2 P41250 P41250 GARS Glycine--tRNA ligase 0 100.11 0.00093495 509290000.0 1012900.0 777700.0 640940.0 655140.0 992660.0 864500.0 773390.0 869450.0 772450.0 854360.0 False True 956712.4178339089 740338.1246485013 682256.0179402598 717404.3086249774 1070776.6945372005 859104.3348300082 851571.8087590277 866434.0808811564 632192.5518798716 846791.0350820224 1.1298093368941242 0.8742866822825895 0.8056958442813162 0.8472034763045025 1.2645111369577529 1.0145411314454849 1.0056457537679793 1.0231970403385662 0.7465744507068804 1.0 19.691646470150793 -4.240818374596902 23.182641561714803 0.9595550348393852 1.1298097874091069 0.12542037377851423 0.1388377118313961 4340.8913889819 4879932.08482567 0.036356391648371296 1.315143996254707 5.7435661248644715e-05 4.240818374596902 0.17025475256972167 VPPAPVPCPPPS(ph)PGPS(ph)AVPSSPK ddPTM_KYSE-520_SHP099_60min_R1 1 VPPAPVPCPPPSPGPSAVPSSPK 23 0 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 2 VPPAPVPCPPPS(0.983)PGPS(0.34)AVPS(0.339)S(0.339)PK 74.36399999999999 0.0043297 278160000.0 572330.0 755840.0 603280.0 601480.0 758300.0 657480.0 659730.0 760640.0 1024400.0 764350.0 True False 540581.7139884303 719528.3118610297 642168.3940821288 658644.4783584436 817973.8958631956 653376.4234401771 726421.9467443246 758001.5173747105 838394.7830225135 757578.4536553015 0.7135653230106188 0.9497739915771356 0.8476592635174333 0.8694076173635834 1.0797216999988415 0.8624538096188565 0.9588735572393231 1.0005584421222222 1.1066771751193223 1.0 19.531035774030485 -2.3101556181699543 0.2955604631551303 1.0298414311056794 1.6343425375314893e-16 0.5162883933199838 0.07800882345050301 21.8939253889505 0.6203342961797912 0.08305301168064576 10.175528387446988 0.004896033512635086 2.3101556181699543 -1.0298414311056792 VPPAPVPCPPPS(ph)PGPSAVPS(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 6 VPPAPVPCPPPSPGPSAVPSSPK 23 0 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 2 VPPAPVPCPPPS(1)PGPS(0.054)AVPS(0.505)S(0.441)PK;VPPAPVPCPPPS(1)PGPS(0.021)AVPS(0.489)S(0.489)PK;VPPAPVPCPPPS(1)PGPSAVPS(0.615)S(0.385)PK;VPPAPVPCPPPS(1)PGPSAVPS(0.603)S(0.397)PK;VPPAPVPCPPPS(1)PGPS(0.001)AVPS(0.668)S(0.331)PK;VPPAPVPCPPPS(0.996)PGPS(0.019)AVPS(0.511)S(0.473)PK 150.26 2.9274999999999997e-07 6611400000.0 3972680.0 3712710.0 3244630.0 3704370.0 3849570.0 4325790.0 4433060.0 5023940.0 6333210.0 5104630.0 True False 3752307.5210587545 3534345.8387086783 3453784.0413915575 4056432.2110405494 4152509.2579428735 4298791.140039673 4881196.967296314 5006513.124736411 5183258.711231956 5059406.949542039 0.7416496752447244 0.6985691947607804 0.6826460246895504 0.8017604141148844 0.8207501984632299 0.8496630500198814 0.9647765075980188 0.9895454496281593 1.0244795018319544 1.0 22.270536855212573 -6.3659119366721955 0.7940816174545268 1.0225370524452229 0.7039087854258641 0.9488341333227633 0.027787075412749166 0.13172047375037618 0.17784353581946807 0.02034214626786941 0.01755922610451306 4.306139186473556e-07 6.3659119366721955 -0.31862826701935876 VPPAPVPCPPPS(ph)PGPSAVPSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 VPPAPVPCPPPSPGPSAVPSSPK 23 0 O95817 O95817 BAG3 BAG family molecular chaperone regulator 3 2 VPPAPVPCPPPS(1)PGPSAVPS(0.078)S(0.922)PK;VPPAPVPCPPPS(1)PGPSAVPS(0.291)S(0.709)PK 151.19 2.6022e-07 4474800000.0 1589120.0 1634080.0 1288080.0 1517850.0 1550580.0 1713270.0 1747210.0 2046350.0 2559800.0 2022450.0 True False 1500968.3457678168 1555576.3439959157 1371111.6978008698 1662106.0076417567 1672601.824406636 1702576.846424762 1923835.037926351 2039251.6894716823 2095004.847306749 2004532.6664422916 0.74878717164125 0.7760294307185336 0.6840056641403418 0.8291738196473073 0.834409861414343 0.8493634825350836 0.9597424228265806 1.017320258038504 1.0451338021969132 1.0 20.93483449757878 -6.554510302547276 0.882012996735535 1.0381258305749392 0.7462375221292072 0.9088004840738556 0.035554636479443145 0.16269636558921755 0.26007017847207886 0.02582024819381253 0.018037350644760173 2.7892644872512754e-07 6.554510302547276 -0.291888308445732 VPPAVIIPPAAPLS(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 1 VPPAVIIPPAAPLSGR 16 0 Q9H4A3-7;Q9H4A3-2;F5GWT4;Q9H4A3-6;Q9H4A3-5;Q9H4A3;Q9H4A3-4 Q9H4A3-7 WNK1 Serine/threonine-protein kinase WNK1 1 VPPAVIIPPAAPLS(1)GR 87.287 0.0023357 35143000.0 26119.0 16316.0 22760.0 21896.0 15733.0 19986.0 20487.0 22468.0 22465.0 16967.0 True False 24670.127003064357 15532.154869184711 24227.14601728756 23976.989256727556 16971.097591475223 19861.259960569718 22558.025893852006 22390.063752070633 18385.9222965646 16816.68558012625 1.4670029290563182 0.9236157027006807 1.4406611755837844 1.4257856664135569 1.0091820716165054 1.181044853692306 1.341407365105928 1.3314195383738954 1.0933142686744917 1.0 14.037605770737072 -7.944873533603105 4.89857377011866 1.0012179885879646 1.255390915214674 0.21077427130631643 0.17259359952124562 0.27663532945327496 13.082600682371313 0.16308973959692663 0.04257074210139412 1.1353413785410826e-08 7.944873533603105 0.25417292662670943 VPPEKS(ph)PIIEAFMK ddPTM_KYSE-520_SHP099_60min_R1 2 VPPEKSPIIEAFMK 14 1 Q8IX21;Q8IX21-2;A0A3B3IRS8;B1AL16 Q8IX21 FAM178A Protein FAM178A 1 VPPEKS(1)PIIEAFMK;VPPEKS(1)PIIEAFMK 116.82 8.333200000000001e-05 271780000.0 472470.0 389530.0 303510.0 359300.0 381330.0 425660.0 361940.0 477370.0 431950.0 441770.0 True False 446261.1472544051 370816.3941035498 323074.74023317016 393447.76397251576 411338.50152909465 423003.2980494399 398528.4273939961 475714.1148889954 353518.76857338485 437856.2614918595 1.019195536302047 0.8468906961387463 0.7378557043637862 0.8985774524086156 0.9394372941649531 0.9660779923717141 0.9101809485061011 1.0864618294326704 0.8073854359622019 1.0 18.740097817170156 -5.680394671528402 3.717356553747194 0.9552214353729606 0.8598802937639127 0.14248277330850367 0.09176251127067507 0.39890153289254054 10.74944404457148 0.027754692621847633 0.03593001211987015 2.087398314584557e-06 5.680394671528402 -0.09534114160904783 VPPELLGGS(ph)PPWK ddPTM_KYSE-520_SHP099_60min_R1 3 VPPELLGGSPPWK 13 0 E7EVA0 E7EVA0 MAP4 Microtubule-associated protein 1 VPPELLGGS(1)PPWK;VPPELLGGS(1)PPWK;VPPELLGGS(1)PPWK 150.34 6.1166e-06 2876192000.0 2523050.0 2330150.0 2280800.0 2074830.0 2183120.0 2208460.0 1952770.0 2314860.0 2563610.0 2529160.0 True False 2383091.3869245187 2218206.0963735436 2427824.0174090285 2272021.2193796155 2354919.123746352 2194676.181953359 2150175.0487986235 2306830.290952384 2098123.0473490297 2506753.6100567025 0.950668377364225 0.8848919524736889 0.9685132227072414 0.9063600069287314 0.9394298323930942 0.8755053441026921 0.8577528482147022 0.9202461229925999 0.8369881423254718 1.0 21.25738876931805 -6.257756815631617 24.826285318617494 0.8905922713783403 0.9282975202931055 0.09397662995924772 0.046514333833888276 595.8376990013949 4016895.437086844 0.014507071213296124 0.01395547297673671 5.523866631015904e-07 6.257756815631617 0.03770524891476523 VPPGYHPLDVEKEWGK ddPTM_KYSE-520_SHP099_60min_R1 1 VPPGYHPLDVEKEWGK 16 1 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;E9PMV1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 183.01 4.6207999999999997e-10 722980000.0 1496400.0 1292900.0 991130.0 716410.0 1233800.0 1135900.0 779510.0 775340.0 1084100.0 869540.0 False True 1413391.7090005546 1230787.143317536 1055019.8256640693 784497.3910034803 1330893.0406382848 1128810.4267592898 858310.4780844708 772650.5265057172 887254.7679370432 861836.5520918833 1.639976519410688 1.4280981008871363 1.2241530289047082 0.9102623799133579 1.5442522568901136 1.309773209339285 0.9959086511254903 0.8965163111616811 1.0294930817026313 1.0 19.717054761563936 -1.0000000000000009 0.27292580820065565 0.9760248689040839 5.523309707539703 0.5079566834006826 0.1806824042918521 47.69399370939253 0.6681110785750494 0.2274027358688424 102.54850350352851 0.0999999999999998 1.0000000000000009 4.547284838635619 VPPPALS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 VPPPALSR 8 0 Q14152-2;Q14152 Q14152-2 EIF3A Eukaryotic translation initiation factor 3 subunit A 1 VPPPALS(1)R 51.872 0.065609 449380000.0 238700.0 218010.0 183510.0 215240.0 273760.0 233300.0 228240.0 241670.0 288050.0 258800.0 True False 225458.8351633472 207536.47236031858 195339.34822638155 235696.3448857341 295303.35451867146 231843.88816175904 251312.72660774045 240831.7031762023 235747.38114958545 256507.23334335338 0.8789570267656129 0.8090862376676766 0.7615354377352228 0.9188682198690187 1.1512476691968632 0.9038493189446214 0.9797490828312834 0.9388885453137759 0.919067186047033 1.0 17.968639983939497 -5.514563512242973 24.76165046988275 0.9805003697827062 0.8198521427504778 0.5337317715135788 0.06922899246170452 272.892929996788 812639.2889794109 0.02035396425142615 0.02762619661960755 3.057993005743811e-06 5.514563512242973 -0.16064822703222836 VPPREPLS(ph)PSNSR ddPTM_KYSE-520_SHP099_60min_R1 1 VPPREPLSPSNSR 13 1 Q9UJM3 Q9UJM3 ERRFI1 ERBB receptor feedback inhibitor 1 1 VPPREPLS(0.999)PS(0.001)NSR 116.13 0.00044649 0.0 165190.0 161270.0 143790.0 118320.0 125760.0 191520.0 136730.0 146420.0 183520.0 196650.0 True False 156026.58140189908 153522.34712879485 153058.93347213446 129565.09722579496 135656.59652348084 190324.6526392632 150552.00275620574 145912.10319468495 150197.39416272147 194907.83399138507 0.8005146750991828 0.7876663753575988 0.7852887713015151 0.6647505878677085 0.6960038175247326 0.976485391796389 0.77242663710921 0.7486210287531813 0.7706072715854007 1.0 17.5724325528899 VPPT(ph)VT(ph)S(ph)T(ph)VLK ddPTM_KYSE-520_SHP099_60min_R1 1 VPPTVTSTVLK 11 0 D6RGG3;Q99715-4;Q99715 D6RGG3 COL12A1 Collagen alpha-1(XII) chain 4 VPPT(1)VT(1)S(1)T(1)VLK 58.981 0.027975 62114000.0 45604.0 200040.0 108070.0 63648.0 147990.0 112030.0 119430.0 149590.0 230930.0 79143.0 True False 43074.25521067984 190429.77813383823 115036.36511811368 69697.08678353111 159635.97105208272 111330.77921458142 131503.1499244761 149071.10720456837 188998.93327156326 78441.85459232218 0.5491233657662131 2.4276552246697816 1.4665176609602157 0.8885191094188254 2.035086649617636 1.4192777541172308 1.6764411118008868 1.9004026355485903 2.409414390491251 1.0 16.259336024966256 -7.023147973085273 3.8138787528337947 1.8607096187601828 1.5084969055614492 0.04394295870624654 0.5900324430806335 0.6861779387628515 21.662162224776043 0.27390711192749007 0.16084821085666143 9.480953726187194e-08 7.023147973085273 -0.3522127131987336 VPS(ph)FESFEDDCSQSLCLNKPTMSFK ddPTM_KYSE-520_SHP099_60min_R1 1 VPSFESFEDDCSQSLCLNKPTMSFK 25 1 A0A590UJP9;P15036 A0A590UJP9 ETS2 Protein C-ets-2 1 VPS(1)FESFEDDCSQSLCLNKPTMSFK 181.22 2.4141e-11 302280000.0 225680.0 213830.0 174200.0 237580.0 247480.0 254230.0 269600.0 325420.0 344490.0 321760.0 True False 213161.08051807375 203557.2858346263 185429.21072985465 260159.53176896842 266955.2680314174 252643.25626816973 296853.7990424417 324291.19397359894 281939.2998862027 318909.4567254919 0.6684062702523014 0.6382917832688874 0.581447827335728 0.8157786678395876 0.837087964629424 0.7922099860639685 0.9308403773612927 1.0168754395161743 0.8840731873589058 1.0 18.282787353364977 -5.902815957477263 0.6589781040577416 0.9765913672721923 0.603136071909743 0.8172963382029814 0.060662581511311355 0.3408283373187941 0.3244842567650588 0.04304206276009825 0.06765134518953501 1.250788969228686e-06 5.902815957477263 -0.37345529536244926 VPS(ph)GIFDVNSR ddPTM_KYSE-520_SHP099_60min_R1 4 VPSGIFDVNSR 11 0 Q5VZ89-5;Q5VZ89-3;Q5VZ89;Q5VZ89-7;X6RAE7 Q5VZ89-5 DENND4C DENN domain-containing protein 4C 1 VPS(1)GIFDVNSR;VPS(1)GIFDVNSR;VPS(1)GIFDVNSR;VPS(1)GIFDVNSR 216.81 9.834700000000001e-10 1284163000.0 797970.0 517720.0 457729.0 414343.0 451657.0 479082.0 397838.0 458311.0 536403.0 467938.0 True False 753705.0133862416 492847.95408643724 487234.94373229396 453722.0341432342 487199.8363232012 476091.8715315548 438055.3475647141 456721.22611159144 439005.73681923584 463792.4333702553 1.6250912243420388 1.0626476816472474 1.0505452626548653 0.9782868401844287 1.0504695662731076 1.026519273011685 0.9445073184602933 0.9847535087899575 0.9465564878432768 1.0 18.823119757490463 -4.225673714953414 2.909740257972269 0.9982591332459688 1.7653607276634824 0.964791967522976 0.03571546090528617 0.08350159445899437 0.9339054260345953 0.00982632879395314 0.15652403218818736 5.947388175363775e-05 4.225673714953414 0.7671015944175136 VPS(ph)PDHR ddPTM_KYSE-520_SHP099_60min_R1 2 VPSPDHR 7 0 Q8NAV1;Q8NAV1-2 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A 1 VPS(1)PDHR;VPS(1)PDHR 76.221 0.030063999999999997 2198300000.0 4283060.0 3500690.0 3652250.0 3220580.0 3575440.0 3427230.0 3244600.0 3461230.0 4438280.0 3549220.0 True False 4045470.12373157 3332511.59775718 3887679.8788066152 3526662.9548973176 3856806.786529218 3405839.3863035804 3572595.8322444544 3449223.8009871533 3632400.2319339733 3517776.672051379 1.150007661336974 0.9473346117261725 1.1051525555030555 1.0025261077306413 1.0963762472960328 0.9681795360583471 1.0155834679980147 0.9805124436667978 1.0325840923311802 1.0 21.74623246476876 -6.269344890910486 24.98407038689486 0.999167159471263 1.0532891574068541 0.22901421303129288 0.05513541983425792 975.9386646320157 3084286.7017404605 0.017691800764202337 0.015905870914024275 5.378424902785218e-07 6.269344890910486 0.05412199793559114 VPS(ph)PDHRR ddPTM_KYSE-520_SHP099_60min_R1 3 VPSPDHRR 8 1 Q8NAV1;Q8NAV1-2 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A 1 VPS(1)PDHRR;VPS(1)PDHRR;VPS(1)PDHRR 88.681 0.0030285999999999998 2809690000.0 646710.0 733670.0 741030.0 491760.0 511770.0 488030.0 421893.0 403988.0 761800.0 444184.0 True False 610835.7071155773 698423.391938879 788797.9794899219 538496.7225469643 552043.3874270183 484984.0237444638 464542.06171888986 402586.65991950774 623476.3234152207 440248.87532992306 1.3874781773328013 1.5864285659230355 1.7917092437744349 1.2231643343629537 1.253934804520094 1.1016133167427542 1.0551805756931496 0.914452443786049 1.4161906102496837 1.0 18.7479597929555 -5.423740951460534 4.759275065585104 1.1235379226677789 1.586469615499978 0.6337200160566396 0.15824340548000687 0.14304208081848643 5.241187256299916 0.04562394829276856 0.06820419549553774 3.7692856278469056e-06 5.423740951460534 0.46293169283219915 VPS(ph)PGMEEAGCSR ddPTM_KYSE-520_SHP099_60min_R1 3 VPSPGMEEAGCSR 13 0 Q96RL1-2;Q96RL1;Q96RL1-3;Q96RL1-4 Q96RL1-2 UIMC1 BRCA1-A complex subunit RAP80 1 VPS(1)PGMEEAGCSR;VPS(1)PGMEEAGCSR;VPS(1)PGMEEAGCSR 179.65 2.0187999999999998e-07 1452510000.0 426236.0 449046.0 385350.0 371178.0 401522.0 427314.0 347455.0 419556.0 425291.0 434118.0 True False 402591.8393995999 427473.15612821217 410190.27758179954 406454.64552126464 433119.49705233047 424646.97482191946 382579.1422340188 418100.6581611062 348068.8751136548 430272.05225869326 0.9356681134324496 0.9934950547780447 0.9533277270241575 0.9446457035440712 1.0066177777029433 0.9869266957794605 0.8891563842589525 0.9717123293653541 0.808950693605321 1.0 18.71488960945409 -6.755191787392614 24.99761052338309 0.9150975443240988 0.9709149792488473 0.19927497151386786 0.051610479637467795 224.17085284667593 896946.9885034884 0.01880869839838283 0.014203220239274741 1.7571474743391332e-07 6.755191787392614 0.055817434924748444 VPS(ph)PPPGHK ddPTM_KYSE-520_SHP099_60min_R1 2 VPSPPPGHK 9 0 P11387 P11387 TOP1 DNA topoisomerase 1 1 VPS(1)PPPGHK;VPS(1)PPPGHK 103.91 0.0012429000000000001 1084110000.0 1430890.0 1398760.0 1204670.0 1168420.0 1128890.0 1364530.0 1316820.0 1347310.0 1420580.0 1476430.0 True False 1351515.6792915012 1331561.4700184364 1282324.9557401494 1279466.285501718 1217727.2204945316 1356013.4621232965 1449937.0165247333 1342636.4960745182 1162638.481907579 1463349.978845158 0.9235765188298196 0.9099405400403765 0.8762941020794839 0.8743405911082484 0.8321503660085018 0.9266501395608937 0.9908340707866686 0.9175088088866451 0.7945047314143582 1.0 20.48084341902022 VPS(ph)PTPAPK ddPTM_KYSE-520_SHP099_60min_R1 5 VPSPTPAPK 9 0 Q9UQ35;Q9UQ35-2 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VPS(0.967)PT(0.033)PAPK;VPS(0.989)PT(0.011)PAPK;VPS(0.922)PT(0.078)PAPK;VPS(0.989)PT(0.011)PAPK;VPS(0.971)PT(0.029)PAPK 113.93 0.00087745 10862300000.0 14744300.0 15544700.0 11782700.0 9936100.0 10314000.0 14673800.0 10882100.0 14370900.0 16389800.0 14864600.0 True False 13926404.286966644 14797909.27892961 12542231.694986554 10880423.956602592 11125653.121367535 14582215.371230263 11982168.867061403 14321050.702093292 13413825.473235456 14732911.20848379 0.9452581427998611 1.0044117601420413 0.8513070850358647 0.7385114728945911 0.7551564632359249 0.9897714826946932 0.8132926817723302 0.9720448660443068 0.9104667287692095 1.0 23.81253919784794 -7.280062949104689 24.427033028586305 0.9559418615729671 0.8704725182609521 0.18060654986076607 0.08739658419676313 1295.774113273981 1699550.7034861853 0.051694118627555775 0.024908344152303315 5.2473139719342516e-08 7.280062949104689 -0.08546934331201506 VPS(ph)S(ph)DEEVVEEPQSR ddPTM_KYSE-520_SHP099_60min_R1 4 VPSSDEEVVEEPQSR 15 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 2 VPS(1)S(1)DEEVVEEPQSR;VPS(1)S(1)DEEVVEEPQSR;VPS(1)S(1)DEEVVEEPQSR;VPS(1)S(1)DEEVVEEPQSR 213.94 4.3137000000000003e-14 6746800000.0 2205710.0 2186620.0 2064250.0 1979510.0 2122500.0 2040830.0 1946290.0 1952770.0 2432010.0 2001550.0 True False 2083354.8693261254 2081571.493016468 2197314.85791678 2167642.0352386194 2289528.674626973 2028092.4229625494 2143039.987159917 1945996.2966499454 1990418.2899830022 1983817.8241823362 1.050174488771324 1.049275527038085 1.1076192738728114 1.0926618406264443 1.1541022803193335 1.022317875280943 1.0802604760561656 0.9809349794767674 1.0033271531892736 1.0 20.919848117117493 -7.255812582437497 24.27193813474312 0.9940982965525519 1.080585084519573 0.5592499998610594 0.034460143364682734 228.5467999135057 985874.7242406835 0.017423437253587967 0.009675557454054835 5.548651104994285e-08 7.255812582437497 0.08648678796702114 VPS(ph)TPPPK ddPTM_KYSE-520_SHP099_60min_R1 1 VPSTPPPK 8 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 VPS(0.738)T(0.262)PPPK 128.36 0.00083344 721100000.0 1297800.0 1408600.0 1054200.0 742480.0 840170.0 1373400.0 934580.0 1237400.0 1380300.0 1468900.0 True False 1225808.4468998387 1340928.7416482938 1122155.418779638 813045.075965249 906286.5990866151 1364828.101163136 1029056.4670218286 1233107.748211332 1129672.3145314115 1455886.6887869085 0.8419669307652107 0.9210392209613502 0.7707711234825931 0.5584535405311688 0.6224980323446477 0.9374548937598671 0.7068245591827421 0.8469805773406699 0.7759342284204073 1.0 20.473466644718897 -8.89683122345881 0.7000771823303604 1.0073546935854059 0.7648162121255 0.2580810100080627 0.11473935251555623 5.994571753321635 3.500867917405187 0.2464135727409253 0.045966177571962 1.2681445994395783e-09 8.89683122345881 -0.24253848145990586 VPS(ph)VESLFR ddPTM_KYSE-520_SHP099_60min_R1 14 VPSVESLFR 9 0 E7EVX2;Q13439-3;Q13439-4;Q13439;Q13439-5;Q86W71 E7EVX2 GOLGA4 Golgin subfamily A member 4 1 VPS(1)VESLFR;VPS(1)VESLFR;VPS(1)VESLFR;VPS(1)VESLFR;VPS(1)VESLFR;VPS(1)VESLFR;VPS(1)VESLFR;VPS(1)VESLFR;VPS(1)VESLFR;VPS(1)VESLFR;VPS(1)VESLFR;VPS(1)VESLFR;VPS(1)VESLFR;VPS(1)VESLFR 199.4 2.3536000000000002e-06 19264240000.0 1639679.0 1340871.0 1252361.0 1036529.0 1185083.0 1331581.0 1078442.0 1128786.0 1330472.0 1169460.0 True False 1548722.7372509518 1276453.5444715964 1333090.1939084479 1135040.4045161926 1278342.2899000973 1323270.1090541084 1187461.4419396454 1124870.504826634 1088891.8232697484 1159099.4942261127 1.3361430532630643 1.101245881678032 1.1501085114341303 0.9792432920299189 1.1028753754686076 1.1416363441152273 1.0244689501244835 0.9704693259120675 0.939429124672995 1.0 20.144572978348354 -1.0000000000000002 0.4890168519726687 1.010023803728118 9.775146153773454 0.6835057293799753 0.06324820864682279 65.8876338733952 0.7229249711685011 0.03800747911879411 589.7764719659328 0.09999999999999995 1.0000000000000002 8.765122350045337 VPS(ph)VESLFRS(ph)PIKESLFR ddPTM_KYSE-520_SHP099_60min_R1 1 VPSVESLFRSPIKESLFR 18 2 E7EVX2;Q13439-3;Q13439-4;Q13439;Q13439-5;Q86W71 E7EVX2 GOLGA4 Golgin subfamily A member 4 2 VPS(1)VES(0.001)LFRS(0.999)PIKES(0.001)LFR 87.65899999999999 0.00089042 36462000.0 36946.0 45198.0 47853.0 28365.0 29222.0 24439.0 24669.0 25810.0 44554.0 26240.0 True False 34896.53172997496 43026.620236418894 50937.68094750715 31060.801071751768 31521.60514956389 24286.46713581325 27162.783266238817 25720.4711340993 36464.11671494056 26007.534014411078 1.3417854884141796 1.6543906166796645 1.958574039325758 1.1943001229774655 1.2120182225695602 0.9338242957735184 1.0444197920182514 0.9889623183746405 1.4020597529444878 1.0 14.666641991677709 -5.415504500033961 5.939686534929977 1.0953159865797952 1.6497018673685555 0.6408018953736494 0.18659009410990277 0.14471729624154275 6.801452887891118 0.05360137342194519 0.07981327859319022 3.841452787557317e-06 5.415504500033961 0.5543858807887603 VPS(ph)WGLEDNVVCSQPAR ddPTM_KYSE-520_SHP099_60min_R1 10 VPSWGLEDNVVCSQPAR 17 0 B8ZZD4;Q86VP1-3;Q86VP1-4;Q86VP1-2;Q86VP1;H7C3L5 B8ZZD4 TAX1BP1 Tax1-binding protein 1 1 VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR;VPS(1)WGLEDNVVCSQPAR 185.85 3.3787e-12 11866830000.0 1415353.0 1327893.0 1158545.8 1072273.0 1082005.6 1236676.0 1102187.0 1283181.0 1627602.0 1315746.0 True False 1336840.5476537428 1264099.0270719712 1233227.5160068225 1174181.5035293663 1167153.2849502766 1228957.4463623285 1213606.8182685159 1278729.9446076958 1332070.505307508 1304089.5140748988 1.0251140993201506 0.9693345536703466 0.9456617070352378 0.9003841307337808 0.8949947625169253 0.9423873385211077 0.9306161925007349 0.9805538123008429 1.0214563424754308 1.0 20.314611470395956 -7.480715704136178 3.6451612948914422 1.0096900012023808 0.9416487823239686 0.37571272029873826 0.03468811379006987 0.2633220505089625 7.139818564123663 0.025916122897417317 0.01019348143353873 3.305858768326756e-08 7.480715704136178 -0.06804121887841219 VPS(ph)YDSFDSEDYPAALPNHKPK ddPTM_KYSE-520_SHP099_60min_R1 2 VPSYDSFDSEDYPAALPNHKPK 22 1 P14921-4;P14921;P14921-3 P14921-4 ETS1 Protein C-ets-1 1 VPS(0.998)Y(0.002)DSFDSEDYPAALPNHKPK;VPS(0.969)Y(0.001)DS(0.03)FDSEDYPAALPNHKPK 204.59 1.414e-14 1765730000.0 485060.0 382990.0 374370.0 426990.0 414320.0 394410.0 427860.0 451640.0 466680.0 441660.0 True False 458152.7548568626 364590.5855202899 398502.48921317863 467571.001220775 446924.62684167153 391948.3408910388 471112.264311198 450073.3662535687 381942.67604543804 437747.23600628006 1.0466148433894162 0.8328792406471285 0.9103483847182112 1.0681301051414682 1.0209650457627557 0.8953759353615104 1.0762198491744202 1.0281580995456285 0.872518761123505 1.0 18.739738543757845 -5.2209413403957585 24.85600808895573 0.9960342887538427 0.9202406295006442 0.11924209619618298 0.07898433080348286 901.4100754957306 553246.4334090925 0.021024978637399376 0.036415871732729095 6.01254942740704e-06 5.2209413403957585 -0.07579365925319848 VPST(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 7 VPSTPPPK 8 0 Q9H7N4 Q9H7N4 SCAF1 Splicing factor, arginine/serine-rich 19 1 VPS(0.013)T(0.987)PPPK;VPS(0.018)T(0.982)PPPK;VPS(0.01)T(0.99)PPPK;VPS(0.004)T(0.996)PPPK;VPS(0.013)T(0.987)PPPK;VPS(0.018)T(0.982)PPPK;VPS(0.002)T(0.998)PPPK 113.71 0.0049138 9247530000.0 9156700.0 9558230.0 7707050.0 5547580.0 6212760.0 9235620.0 6745580.0 8803470.0 9766740.0 9661680.0 True False 8648759.597571094 9099038.283604266 8203858.774716011 6074820.335259248 6701668.866231072 9177977.069800701 7427489.056916591 8772932.817315336 7993346.215479607 9576085.031873306 0.9031623642422058 0.9501835304635219 0.856702791110361 0.6343741012156479 0.6998338928617542 0.9584268559909889 0.7756289790864148 0.9161293773097527 0.8347196363518423 1.0 23.191004532227694 -8.527921813145571 0.7451878776914849 1.001050138455558 0.8248590890330876 0.1950063245148963 0.10081642853301363 3.2336205450938 2.9069692371564195 0.12202240883377372 0.039460634715214986 2.965365201759685e-09 8.527921813145571 -0.17619104942247032 VPSYDS(ph)FDSEDYPAALPNHKPK ddPTM_KYSE-520_SHP099_60min_R1 1 VPSYDSFDSEDYPAALPNHKPK 22 1 P14921-4;P14921;P14921-3 P14921-4 ETS1 Protein C-ets-1 1 VPS(0.126)Y(0.089)DS(0.784)FDS(0.001)EDYPAALPNHKPK 93.397 0.0014752 172110000.0 54389.0 58145.0 53250.0 54681.0 55745.0 48628.0 46749.0 56539.0 55980.0 65354.0 True False 51371.93374821652 55351.62692257565 56682.58020301241 59877.86579955784 60131.81435433713 48324.494614359275 51474.84514627263 56342.879405301836 45815.4431409609 64775.01440464263 0.7930825522832232 0.8545212599537211 0.875068585070817 0.9243975682584519 0.9283180390929762 0.7460360303817347 0.7946713037331763 0.8698242667046565 0.7073011648404538 1.0 15.98314981078082 -6.252452126460731 24.983590998871737 0.8136246154464233 0.8766750757154087 0.08429604802477086 0.08157930177315421 1402.9171492405299 3899962.4031399945 0.026135966391170953 0.025778216508898485 5.591751636720434e-07 6.252452126460731 0.06305046026898542 VPTANVS(ph)VVDLTCR ddPTM_KYSE-520_SHP099_60min_R1 5 VPTANVSVVDLTCR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 1 VPTANVS(1)VVDLTCR;VPT(0.022)ANVS(0.978)VVDLTCR;VPTANVS(1)VVDLTCR;VPTANVS(1)VVDLTCR;VPT(0.006)ANVS(0.994)VVDLTCR 172.56 1.99e-08 1234000000.0 380009.0 473929.0 408878.0 346360.0 401226.0 431968.0 326951.0 442520.0 574390.0 441885.0 True False 358929.14324083907 451160.7394580678 435234.9301079304 379277.9502630692 432800.2035363401 429271.9274816059 360002.3978142634 440985.0014049446 470095.2551935788 437970.2426813278 0.8195286077963065 1.030117335588796 0.9937545698158593 0.8659902278772765 0.9881954556699198 0.9801394835720588 0.8219791271897102 1.0068834784417313 1.073349760740767 1.0 18.740473325554397 -7.508131193031082 24.73495573067156 1.03782215712287 0.9352205008925241 0.2872421747847661 0.07137890937487547 738.5928375787609 1238797.9392588607 0.04016674852703269 0.018168512801583016 3.10362189472677e-08 7.508131193031082 -0.102601656230346 VPTANVSVVDLTCR ddPTM_KYSE-520_SHP099_60min_R1 1 VPTANVSVVDLTCR 14 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 151.66 1.7173e-05 951770000.0 182370.0 194200.0 189530.0 170270.0 201640.0 180210.0 140280.0 167250.0 201880.0 171520.0 False True 172253.57255441794 184870.34049985715 201747.40705872182 186452.4096064579 217507.92082533945 179085.24254449466 154460.87140086686 166669.84878644365 165223.68098065723 170000.46624054085 1.0132535302032 1.0874696086908155 1.186746198526661 1.0967758720298948 1.279454848774228 1.053439714048192 0.9085908692880503 0.9804081863552976 0.9719013402402983 1.0 17.3751791775174 -6.525237665541054 13.553755983676357 0.9660613739810554 1.134750290282163 0.5713801092874009 0.0683934257466015 0.1974341868279986 1084.5089253530605 0.02606767756201714 0.02066844351821957 2.9837493297582827e-07 6.525237665541054 0.1686889163011075 VPTTPAS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 5 VPTTPASPVK 10 0 Q6IE81-2;Q6IE81 Q6IE81-2 JADE1 Protein Jade-1 1 VPT(0.001)T(0.004)PAS(0.995)PVK;VPTT(0.031)PAS(0.969)PVK;VPTT(0.011)PAS(0.989)PVK;VPTT(0.001)PAS(0.999)PVK;VPT(0.001)T(0.029)PAS(0.971)PVK 138.63 0.0002577 2398940000.0 2858070.0 2962470.0 2337370.0 2037030.0 2058840.0 3271460.0 2364520.0 3100100.0 3159980.0 3246670.0 True False 2699527.1596787046 2820148.494441871 2488040.61012423 2230628.7187445983 2220858.9948028214 3251041.6046535326 2603548.7570913737 3089346.4766687765 2586207.288613318 3217907.0296710357 0.8389077542599717 0.8763921606306235 0.7731859830576213 0.6931924067963623 0.6901563576340669 1.0102969335897451 0.8090814100858384 0.9600483942460569 0.8036923580348759 1.0 21.617691214288545 -6.256779450268874 24.994739452236832 0.9074054426207281 0.7754596992653207 0.41531389029560384 0.08403480231530384 450.58207283022244 2416815.95961727 0.028824587499371744 0.027911666668269282 5.536311908700314e-07 6.256779450268874 -0.13194574335540743 VPVDVAYR ddPTM_KYSE-520_SHP099_60min_R1 1 VPVDVAYR 8 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4;A0A075B730;P58107 Q15149;Q15149-4;A0A075B730 PLEC;EPPK1 Plectin;Epiplakin 0 113.14 0.0079113 312800000.0 289030.0 319360.0 202970.0 169890.0 275570.0 371350.0 243940.0 241050.0 248850.0 275730.0 False True 272996.9297329792 304017.4662308669 216053.7709634823 186036.29452070902 297255.79122118035 369032.2669047119 268599.8358249744 240213.85381149309 203665.1129980016 273287.2467146936 0.9989376855846571 1.1124465919489284 0.7905739238137156 0.6807353682147018 1.087704584808194 1.3503457308784488 0.9828480437851798 0.8789793768249695 0.7452419219936153 1.0 18.06005861073127 -7.269637938932254 5.176885442956094 0.8568994261255928 1.0016835028908497 0.09205823737753482 0.17949671396445804 0.4626618361036739 41.056256304376866 0.1062119314761903 0.053459025215444246 5.3747969378906755e-08 7.269637938932254 0.14478407676525695 VPVHDVTDASK ddPTM_KYSE-520_SHP099_60min_R1 2 VPVHDVTDASK 11 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ; 183.0 2.1978999999999997e-06 860360000.0 2564120.0 2572830.0 1801910.0 1793200.0 2385860.0 2700810.0 1852430.0 2349030.0 2279310.0 2383340.0 False True 2421883.1521535073 2449227.384903435 1918064.0017579354 1963625.1888547605 2573613.6083135456 2683953.2429753994 2039691.7023745938 2340881.7631977214 1865444.7607292521 2362225.4618104645 1.0252548672036241 1.036830490780626 0.8119732992327864 0.8312606991162446 1.0894868630960688 1.13619689837665 0.8634619071506099 0.9909645802410475 0.7896980160816368 1.0 21.17171523817127 VPVLIS(ph)PTLK ddPTM_KYSE-520_SHP099_60min_R1 6 VPVLISPTLK 10 0 P42684-4;P42684-7;P42684-10;P42684-5;P42684-2;P42684-6;P42684-3;P42684 P42684-4 ABL2 Abelson tyrosine-protein kinase 2 1 VPVLIS(0.998)PT(0.002)LK;VPVLIS(1)PTLK;VPVLIS(0.964)PT(0.036)LK;VPVLIS(0.988)PT(0.012)LK;VPVLIS(0.968)PT(0.032)LK;VPVLIS(0.815)PT(0.185)LK 190.53 3.1908e-06 5139626000.0 3328822.0 3873313.0 2982782.0 2675700.0 2928950.0 5019300.0 4097020.0 5553390.0 5583580.0 6124090.0 True False 3144165.607817862 3687233.2295186617 3175056.9003399387 2929997.723521461 3159441.7015541466 4987972.686885201 4511186.76466196 5534126.58626097 4569742.62259747 6069835.32706993 0.517998502166225 0.607468412375956 0.5230878152789398 0.48271453270806414 0.5205152250941366 0.8217640871804388 0.7432140283185622 0.9117424589066141 0.7528610541076088 1.0 22.53322594642421 -6.271366861609873 7.43608936315207 0.8345536978900944 0.5313286598272281 0.8132581756308666 0.07550994129374736 0.0628696126954237 24.405277630937405 0.025056519961346054 0.02305008102426734 5.353442450732452e-07 6.271366861609873 -0.30322503806286627 VPVNLLNS(ph)PDCDVK ddPTM_KYSE-520_SHP099_60min_R1 6 VPVNLLNSPDCDVK 14 0 P33981-2;P33981 P33981-2 TTK Dual specificity protein kinase TTK 1 VPVNLLNS(1)PDCDVK;VPVNLLNS(1)PDCDVK;VPVNLLNS(1)PDCDVK;VPVNLLNS(1)PDCDVK;VPVNLLNS(1)PDCDVK;VPVNLLNS(1)PDCDVK 262.68 1.0938000000000002e-24 3246880000.0 2739970.0 2348740.0 1900750.0 1764750.0 1899200.0 2559720.0 2240760.0 2595440.0 2777680.0 2707610.0 True False 2587978.4021052215 2235903.0048693824 2023275.3863075282 1932471.309408566 2048656.2350301761 2543743.838000078 2467277.888510168 2586437.0244202493 2273323.33161458 2683622.681888704 0.9643600121473972 0.8331659364630867 0.7539343738455695 0.720097993823973 0.763392055394447 0.947876858832412 0.9193833042034527 0.9637856476156862 0.8471098962446688 1.0 21.355750411788335 -6.267313417122849 24.651027613148038 0.9323522607525808 0.8006694111646103 0.44560689736671355 0.07152335420142086 399.054551981632 1674670.2500949637 0.026215080761804656 0.023734371822521597 5.403642177728191e-07 6.267313417122849 -0.1316828495879705 VPVNLLNS(ph)PDCDVKTDDSVVPCFMK ddPTM_KYSE-520_SHP099_60min_R1 1 VPVNLLNSPDCDVKTDDSVVPCFMK 25 1 P33981-2;P33981 P33981-2 TTK Dual specificity protein kinase TTK 1 VPVNLLNS(1)PDCDVKTDDSVVPCFMK 114.98 0.00020738 516500000.0 263000.0 295070.0 234160.0 160190.0 174230.0 284980.0 162490.0 196210.0 375330.0 249600.0 True False 248410.86572249827 280894.39429090027 249254.32826924656 175414.40943712046 187940.90976690568 283201.33411203616 178916.07494957853 195529.39330575822 307179.53329933615 247388.7381858614 1.0041316655888715 1.1354372731383846 1.0075411277694604 0.7090638430975498 0.7596987281842514 1.1447624341705847 0.7232183496370806 0.7903730571553276 1.2416876190562658 1.0 17.916420300809236 -1.1344430514648653 12.847281675529223 0.9393840973759745 1.1167859234608606 0.0 0.18406048360237978 0.0 0.0 0.042782501993822275 0.0 0.07337649258596553 1.1344430514648653 0.17740182608488608 VPVPGPGS(ph)GGNGPER ddPTM_KYSE-520_SHP099_60min_R1 8 VPVPGPGSGGNGPER 15 0 Q6ZRV2;A0A494C1T9;J3KPS2 Q6ZRV2 FAM83H Protein FAM83H 1 VPVPGPGS(1)GGNGPER;VPVPGPGS(1)GGNGPER;VPVPGPGS(1)GGNGPER;VPVPGPGS(1)GGNGPER;VPVPGPGS(1)GGNGPER;VPVPGPGS(1)GGNGPER;VPVPGPGS(1)GGNGPER;VPVPGPGS(1)GGNGPER 177.3 1.4415e-08 13009840000.0 6761690.0 5833400.0 5318840.0 4673410.0 5056830.0 6087560.0 5110770.0 6017120.0 6184000.0 5621700.0 True False 6386605.5766051635 5553154.707888088 5661700.9368448965 5117569.481288047 5454773.751573104 6049565.279974268 5627416.507908525 5996248.015126365 5061141.485953955 5571896.1116164215 1.1462176337585004 0.9966364405665675 1.0161174622479496 0.918461037099887 0.9789798019027782 1.0857282976547231 1.009964363150338 1.0761593351723204 0.9083337852266066 1.0 22.409736928366527 -4.26017602175511 24.429938130791765 1.0017672428237143 1.1462176989657116 0.40084207448916875 0.05392143815894628 83.30584306041068 1610646.3161718885 0.013443689339893865 0.08110929765242904 5.4931818728667646e-05 4.26017602175511 0.14445045614199725 VQAGPGS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 VQAGPGSPR 9 0 I3L4F6;I3L0U5;Q6PK04 I3L4F6 CCDC137 Coiled-coil domain-containing protein 137 1 VQAGPGS(1)PR;VQAGPGS(1)PR;VQAGPGS(1)PR 96.334 0.0031194000000000005 7762600000.0 4110590.0 3674180.0 3715130.0 3130030.0 3057010.0 3497280.0 3099980.0 3360910.0 3847210.0 3549240.0 True False 3882567.378441988 3497666.877743387 3954613.2242181753 3427507.1101221624 3297579.2949924124 3475452.178269856 3413356.231289271 3349251.787652294 3148653.644271818 3517796.494866934 1.1036930033068475 0.994277776684092 1.1241733937675562 0.9743335395107365 0.9373991075959465 0.9879628293851377 0.9703108853141279 0.9520879881878967 0.8950641826115414 1.0 21.74624059439147 -5.400751609376343 6.290716868492053 0.9568944212773633 1.0655254000552046 0.6146365813261667 0.04152556582093004 0.15791390154127746 7.46840819175397 0.01125102353281665 0.016752224255653866 3.974187843978562e-06 5.400751609376343 0.10863097877784123 VQAGPGS(ph)PRR ddPTM_KYSE-520_SHP099_60min_R1 2 VQAGPGSPRR 10 1 I3L4F6;I3L0U5;Q6PK04 I3L4F6 CCDC137 Coiled-coil domain-containing protein 137 1 VQAGPGS(1)PRR;VQAGPGS(1)PRR 86.49799999999999 0.002744 258180000.0 297704.0 331410.0 327920.0 220354.0 263040.0 241708.0 203335.0 181939.0 378940.0 219453.0 True False 281189.7656617891 315488.56614344864 349058.24789055134 241296.37790815416 283739.75150712766 240199.4107149697 223890.08615836382 181307.89607388186 310134.0483000306 217508.81715185044 1.2927741014998981 1.4504633433926273 1.6048004511323404 1.109363661978341 1.3044976990934538 1.104320339102751 1.0293379785246057 0.833565730566704 1.425845868508012 1.0 17.73071435909207 -5.738740165582009 1.2805278711214232 1.0668082381635589 1.4374873144968352 0.4029020706262153 0.17544276089638608 0.4238793633584557 1.4585795319482857 0.06833742250749647 0.10006872346481288 1.8249872489420133e-06 5.738740165582009 0.37067907633327635 VQAMQIS(ph)SEKEEDDNEK ddPTM_KYSE-520_SHP099_60min_R1 2 VQAMQISSEKEEDDNEK 17 1 Q9UKY7-2;Q9UKY7;H0Y8K3 Q9UKY7-2 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.5)S(0.5)EKEEDDNEK;VQAMQIS(0.5)S(0.5)EKEEDDNEK 130.87 2.359e-05 2403310000.0 1414810.0 1235850.0 1100240.0 1177210.0 1298660.0 1256040.0 1273170.0 1353530.0 1379250.0 1294890.0 True False 1336327.6689461872 1176477.9109513315 1171163.230846243 1289091.6844589089 1400857.1536353645 1248200.5884556177 1401874.4485417865 1348834.9203462778 1128812.968063064 1283418.282009175 1.0412253648546936 0.9166753563067297 0.9125343212446699 1.004420540465461 1.09150475201455 0.9725594577798716 1.0922973968760752 1.0509706299607122 0.8795363007420477 1.0 20.291560008678626 -5.502377757903493 23.070047180519012 1.0214708223137603 0.9537445734354453 0.12578122397173086 0.06671987743714965 500.41136195757736 563118.1987435756 0.018714749466631802 0.027328343458138806 3.1450115309789876e-06 5.502377757903493 -0.06772624887831502 VQAMQIS(ph)SEKEEDDNEKR ddPTM_KYSE-520_SHP099_60min_R1 2 VQAMQISSEKEEDDNEKR 18 2 Q9UKY7-2;Q9UKY7;H0Y8K3 Q9UKY7-2 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.6)S(0.4)EKEEDDNEKR;VQAMQIS(0.5)S(0.5)EKEEDDNEKR 96.881 0.00034296 401970000.0 750276.0 665514.0 685349.0 707710.0 723857.0 730656.0 601886.0 762879.0 949760.0 741933.0 True False 708656.6946418751 633541.7084831209 729527.6931371705 774970.54561923 780820.4277170585 726095.7048809179 662730.5107212865 760232.7508062974 777307.5255012324 735360.0508351387 0.9636866917601291 0.8615394700373185 0.9920687047231564 1.053865442838656 1.0618205691624 0.9874016191881795 0.901232681825226 1.0338238390063632 1.0570434505089779 1.0 19.488091277266395 -4.905757764337689 6.756018785264384 1.0120919448450134 0.9136211770904847 0.387459876754114 0.050005067721699575 0.22258718623828397 13.454130527087855 0.013934488299167973 0.029440641221043572 1.2423450549744e-05 4.905757764337689 -0.09847076775452868 VQAMQIS(ph)SEKEEDDNEKRQDPGDNWEEGGGGGGGMEK ddPTM_KYSE-520_SHP099_60min_R1 5 VQAMQISSEKEEDDNEKRQDPGDNWEEGGGGGGGMEK 37 3 Q9UKY7-2;Q9UKY7;H0Y8K3 Q9UKY7-2 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.5)S(0.5)EKEEDDNEKRQDPGDNWEEGGGGGGGMEK;VQAMQIS(0.5)S(0.5)EKEEDDNEKRQDPGDNWEEGGGGGGGMEK;VQAMQIS(0.5)S(0.5)EKEEDDNEKRQDPGDNWEEGGGGGGGMEK;VQAMQIS(0.5)S(0.5)EKEEDDNEKRQDPGDNWEEGGGGGGGMEK;VQAMQIS(0.5)S(0.5)EKEEDDNEKRQDPGDNWEEGGGGGGGMEK 256.92 1.264e-41 4649020000.0 2102300.0 2137760.0 1895480.0 1683760.0 1855480.0 1672680.0 1411243.0 1567380.0 2400530.0 1551770.0 True False 1985681.228168849 2035058.8007568235 2017665.6736752302 1843784.0441590953 2001495.7197629476 1662240.1836708563 1553905.2148444066 1561943.124609242 1964654.2644367798 1538022.5250587899 1.2910612138745807 1.3231657973793556 1.3118570377232326 1.1988017172171246 1.3013435675699494 1.0807645249586435 1.0103266951730825 1.0155528278427117 1.2773897861877428 1.0 20.552645201721862 -6.265779217140623 23.36867614347668 1.0736237846504235 1.2840284844886005 0.6280576602924328 0.08018093613531767 100.90382434693565 543332.5466625798 0.027649478680822855 0.025272489609216086 5.42276498159751e-07 6.265779217140623 0.210404699838177 VQAMQISS(ph)EKEEDDNEK ddPTM_KYSE-520_SHP099_60min_R1 3 VQAMQISSEKEEDDNEK 17 1 Q9UKY7-2;Q9UKY7;H0Y8K3 Q9UKY7-2 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.023)S(0.977)EKEEDDNEK;VQAMQIS(0.144)S(0.856)EKEEDDNEK;VQAMQIS(0.196)S(0.804)EKEEDDNEK 207.43 2.9506e-14 3236190000.0 2033610.0 1612760.0 1535210.0 1554410.0 1701870.0 1748480.0 1800500.0 1833150.0 1956460.0 1515420.0 True False 1920801.5993989715 1535280.5887978883 1634172.0930228499 1702140.6590495904 1835797.4866842872 1737567.0877542743 1982512.1111866331 1826791.230510426 1601216.1823430562 1501994.55777892 1.278833927493961 1.0221612194575391 1.0880013409898022 1.133253546248954 1.2222397725588163 1.156839802617999 1.3199196368049964 1.216243574951297 1.066059909505172 1.0 20.518448154826434 -4.03572538593682 13.071888687204307 1.1503312911270942 1.322614460888589 0.15706206199293904 0.09413992242463062 53494.18614623554 2219618.7689272235 0.024227399403110583 78571.36280918166 9.210317765468656e-05 4.03572538593682 0.17228316976149483 VQAMQISS(ph)EKEEDDNEKR ddPTM_KYSE-520_SHP099_60min_R1 6 VQAMQISSEKEEDDNEKR 18 2 Q9UKY7-2;Q9UKY7;H0Y8K3 Q9UKY7-2 CDV3 Protein CDV3 homolog 1 VQAMQIS(0.207)S(0.793)EKEEDDNEKR;VQAMQIS(0.18)S(0.82)EKEEDDNEKR;VQAMQIS(0.222)S(0.778)EKEEDDNEKR;VQAMQIS(0.048)S(0.952)EKEEDDNEKR;VQAMQIS(0.251)S(0.749)EKEEDDNEKR;VQAMQIS(0.383)S(0.617)EKEEDDNEKR 196.4 6.9889e-13 6576900000.0 3827270.0 3145873.0 2964488.0 3261931.0 3360986.0 3238271.0 3332889.0 3721675.0 3750452.0 3369682.0 True False 3614963.7036264073 2994740.5390283577 3155583.6398285045 3571943.941504687 3625476.476805566 3218059.7495133635 3669809.9459820585 3708765.3780704774 3069464.4580011265 3339829.239052928 1.0823797999479454 0.8966747473225827 0.944833826511241 1.0694989731024631 1.0855274977572322 0.9635402049554801 1.098801670178414 1.1104655695277907 0.9190483220248504 1.0 21.671342910865018 -5.258700662382788 24.96208238082951 1.041624235980277 0.9668339851516455 0.12179865515833732 0.07233574241840701 402.93755983176675 3672558.756746864 0.01944810511599025 0.03176602759204801 5.511874716598381e-06 5.258700662382788 -0.07479025082863144 VQAYEEPSVAS(ph)SPNGK ddPTM_KYSE-520_SHP099_60min_R1 2 VQAYEEPSVASSPNGK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 VQAYEEPS(0.002)VAS(0.499)S(0.499)PNGK;VQAYEEPSVAS(0.747)S(0.253)PNGK 281.09 4.1626e-31 8314800000.0 11329200.0 11539400.0 8876800.0 7469900.0 8330100.0 10797400.0 8421500.0 10557200.0 12539300.0 10997500.0 True False 10700746.691799706 10985029.903007487 9449012.73138218 8179837.050092681 8985631.478214443 10730009.421507843 9272827.40591959 10520579.537269011 10262479.210029505 10900070.705925541 0.9817135118199299 1.0077943711902493 0.8668762787240883 0.7504388981298924 0.8243645129136307 0.9843981485069405 0.8507125922475582 0.965184522293949 0.9415057467884658 1.0 23.37783415763184 -9.185156824223574 7.931972512213286 1.000000000000024 0.9049627962285605 0.1072672782926174 0.07905973037656754 105894177.61626913 0.0 0.08333187505895563 0.02083296876473892 6.528947490508165e-10 9.185156824223574 -0.09503720377146352 VQAYEEPSVASS(ph)PNGK ddPTM_KYSE-520_SHP099_60min_R1 6 VQAYEEPSVASSPNGK 16 0 Q99575 Q99575 POP1 Ribonucleases P/MRP protein subunit POP1 1 VQAYEEPSVAS(0.001)S(0.999)PNGK;VQAYEEPSVASS(1)PNGK;VQAYEEPSVAS(0.056)S(0.944)PNGK;VQAYEEPSVAS(0.002)S(0.998)PNGK;VQAYEEPSVAS(0.013)S(0.987)PNGK;VQAYEEPSVAS(0.002)S(0.998)PNGK 349.19 4.751899999999999e-59 18803750000.0 21740400.0 21443800.0 17256110.0 14681360.0 14346380.0 20741900.0 16646800.0 21049200.0 23554800.0 21680800.0 True False 20534416.673587054 20413607.6602 18368466.461352214 16076672.040288169 15475358.486263793 20612442.10828288 18329621.00111169 20976185.23812023 19277842.08818696 21488724.979407184 0.9555902778440949 0.9499683056934519 0.854795548779877 0.7481445295472193 0.7201617825670882 0.9592212719943108 0.852987835186923 0.9761484340379374 0.897114282334623 1.0 24.357076548072765 -7.109188473728036 1.4503432674743975 0.9585241540040403 0.8533913669019281 0.2091936076737898 0.08141550532184537 0.7778323836476999 3.045448954382282 0.0667439967107783 0.028868332509424985 7.776989744852427e-08 7.109188473728036 -0.10513278710211227 VQDDEVGDGTTSVTVLAAELLR ddPTM_KYSE-520_SHP099_60min_R1 2 VQDDEVGDGTTSVTVLAAELLR 22 0 P78371-2;P78371;F8VQ14;F5GWF6 P78371-2 CCT2 T-complex protein 1 subunit beta 0 ; 209.67 1.9847999999999996e-18 67168000.0 46549.0 63002.0 142359.0 62403.0 66117.0 53790.0 52901.0 54986.0 95554.0 59406.0 False True 43966.83417686903 59975.28935207004 151535.68892245356 68333.76235785379 71320.0317457297 53454.276657612594 58248.749344006654 54795.26639982888 78203.80232031763 58879.70905716867 0.7467230202204271 1.0186070942340701 2.5736487382320705 1.160565557338366 1.2112836983702182 0.9078556520330576 0.9892839193116699 0.9306307262256672 1.3281961404460476 1.0 15.84548292216012 -5.50284970649201 24.93188079047997 1.0591530264878661 1.4808130696252637 0.12324039850130353 0.45717939053427253 1507.5809318307963 1876616.765233889 0.13412278484936824 0.19597873548092284 3.1415956976679804e-06 5.50284970649201 0.4216600431373976 VQDTS(ph)NTGLGEDIIHQLSK ddPTM_KYSE-520_SHP099_60min_R1 12 VQDTSNTGLGEDIIHQLSK 19 0 Q8IWA0 Q8IWA0 WDR75 WD repeat-containing protein 75 1 VQDT(0.1)S(0.865)NT(0.034)GLGEDIIHQLSK;VQDT(0.127)S(0.846)NT(0.026)GLGEDIIHQLSK;VQDT(0.157)S(0.834)NT(0.01)GLGEDIIHQLSK;VQDT(0.214)S(0.721)NT(0.064)GLGEDIIHQLSK;VQDT(0.193)S(0.798)NT(0.009)GLGEDIIHQLSK;VQDT(0.136)S(0.611)NT(0.254)GLGEDIIHQLSK;VQDT(0.058)S(0.912)NT(0.03)GLGEDIIHQLSK;VQDT(0.031)S(0.926)NT(0.043)GLGEDIIHQLSK;VQDT(0.396)S(0.556)NT(0.047)GLGEDIIHQLSK;VQDT(0.111)S(0.847)NT(0.043)GLGEDIIHQLSK;VQDT(0.041)S(0.945)NT(0.014)GLGEDIIHQLSK;VQDT(0.192)S(0.785)NT(0.023)GLGEDIIHQLSK 304.75 5.158899999999999e-45 36074560000.0 7607510.0 7861220.0 7444310.0 7836410.0 7356440.0 7541320.0 7459290.0 6890420.0 8599160.0 7467210.0 True False 7185506.255104788 7483555.191268218 7924182.133917134 8581180.050297424 7935349.9755820185 7494251.824569384 8213347.82885494 6866518.741256112 7037769.31118302 7401056.328801466 0.970875769063146 1.0111469037393628 1.0706825866302228 1.15945341706203 1.0721915390241432 1.0125921884157596 1.1097534546376053 0.9277755007126236 0.9509141666433881 1.0 22.819299765952692 -7.269374782531227 24.987347938788293 0.9545086200773458 1.0594674700708353 0.42036526860509293 0.05290676632663009 607.6547616534699 1913396.894084485 0.030104016319359144 0.014898385188762657 5.378054729293562e-08 7.269374782531227 0.10495884999348948 VQDTSNT(ph)GLGEDIIHQLSK ddPTM_KYSE-520_SHP099_60min_R1 1 VQDTSNTGLGEDIIHQLSK 19 0 Q8IWA0 Q8IWA0 WDR75 WD repeat-containing protein 75 1 VQDT(0.005)S(0.019)NT(0.976)GLGEDIIHQLSK 83.87700000000001 0.010673 316590000.0 209920.0 192690.0 187710.0 204880.0 207650.0 205460.0 191740.0 192660.0 210870.0 210130.0 True False 198275.3191348549 183432.88316641355 199810.08694661912 224351.73360058173 223990.87363311692 204177.64792848253 211122.95040206867 191991.70742718226 172581.3236001147 208268.41167866625 0.9520182035131207 0.8807523027036331 0.9593873854231081 1.0772240100756623 1.0754913422910652 0.9803582131480636 1.013706057007851 0.9218474653919336 0.8286485800179215 1.0 17.668084515109815 -9.575740852182278 9.146666196458055 0.999999997301189 0.9699137485249127 0.015929889047568757 0.07438817603823845 0.0 0.0 0.07902290197948697 0.0191658687809829 2.6561900640972274e-10 9.575740852182278 -0.030086248776276303 VQEAES(ph)PVFK ddPTM_KYSE-520_SHP099_60min_R1 1 VQEAESPVFK 10 0 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 1 VQEAES(1)PVFK 117.03 0.00057162 399530000.0 804180.0 934130.0 849480.0 836880.0 884210.0 982810.0 954730.0 1185400.0 1250100.0 884000.0 True False 759570.5323069138 889252.9926422843 904238.8400160556 916416.8235828535 953792.2965332939 976675.9182351411 1051243.4256668775 1181288.1240744407 1023113.3524565061 876168.4477415931 0.8669229464548496 1.014933823438196 1.032037666212264 1.045936801245245 1.0885946634939703 1.1147124970690458 1.1998188571804391 1.3482431684447465 1.167713075144029 1.0 19.740848736225782 -5.3092530547572805 0.6504335473321892 1.1991833375991676 0.8892476918892169 0.5036875966729046 0.08746994347735153 0.9281382246220853 0.6749242244650048 0.05121102525788311 0.18038638230621637 4.906219172158139e-06 5.3092530547572805 -0.3099356457099507 VQEHEDS(ph)GDS(ph)EVENEAK ddPTM_KYSE-520_SHP099_60min_R1 7 VQEHEDSGDSEVENEAK 17 0 Q9Y5J1 Q9Y5J1 UTP18 U3 small nucleolar RNA-associated protein 18 homolog 2 VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK;VQEHEDS(1)GDS(1)EVENEAK 305.34 6.8567e-49 8351820000.0 14166470.0 13262940.0 12203890.0 12179620.0 12354810.0 12415420.0 12148830.0 13154020.0 14695410.0 12501920.0 True False 13380627.668942198 12625768.454321189 12990572.276314404 13337167.422863727 13327063.257747006 12337930.758513784 13376952.297554847 13108391.774791336 12027093.985139476 12391162.715146571 1.0798524703889276 1.0189333111482624 1.0483739560965601 1.0763451121952252 1.0755296790232944 0.9957040386074731 1.079555858079668 1.0578823050050055 0.9706186789426896 1.0 23.56280823221246 -7.756354763178839 24.999698491594394 0.9853093273637696 1.0530324107586546 0.5049482698115693 0.027200303471154427 92.1824017715488 453253.6262129298 0.019350650840011002 0.006813475987312198 1.7524483902602412e-08 7.756354763178839 0.06772308339488498 VQEKPDS(ph)PGGSTQIQR ddPTM_KYSE-520_SHP099_60min_R1 9 VQEKPDSPGGSTQIQR 16 1 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 VQEKPDS(0.981)PGGS(0.018)T(0.001)QIQR;VQEKPDS(1)PGGSTQIQR;VQEKPDS(0.982)PGGS(0.017)T(0.001)QIQR;VQEKPDS(0.994)PGGS(0.006)TQIQR;VQEKPDS(0.997)PGGS(0.003)TQIQR;VQEKPDS(0.998)PGGS(0.001)T(0.001)QIQR;VQEKPDS(1)PGGSTQIQR;VQEKPDS(0.996)PGGS(0.003)T(0.001)QIQR;VQEKPDS(0.994)PGGS(0.005)TQIQR 244.97 4.860800000000001e-23 25214690000.0 24634680.0 22295910.0 18842750.0 18477820.0 18801320.0 20913870.0 19365370.0 22473430.0 26108660.0 21846440.0 True False 23268145.192382943 21224781.016756803 20057383.814465992 20233946.457240827 20280876.919122513 20783338.779723816 21323010.587398082 22395474.91666801 21367985.48975848 21652897.537873115 1.0745972981992178 0.9802282110111363 0.9263140777987607 0.9344683048469427 0.9366357035426414 0.9598409978789973 0.98476476647534 1.0342945962541987 0.9868418511833673 1.0 24.368056760009335 -7.001321495151751 5.250788677135384 1.0084832166162863 0.9646590594372386 0.1451847922834606 0.040906971044349795 0.31832197666477785 27.621332819256473 0.01968284119521372 0.012217342560774119 9.969617697544571e-08 7.001321495151751 -0.04382415717904764 VQEKPDSPGGS(ph)TQIQR ddPTM_KYSE-520_SHP099_60min_R1 1 VQEKPDSPGGSTQIQR 16 1 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 VQEKPDS(0.072)PGGS(0.844)T(0.084)QIQR 245.04 4.8313000000000006e-23 2094000000.0 2557200.0 2223000.0 1943700.0 1794500.0 1808600.0 2149700.0 2025200.0 2018300.0 2502200.0 2164700.0 True False 2415347.0183481798 2116203.7432089727 2068994.0120299596 1965048.7404639022 1950926.5304736583 2136282.9249092713 2229926.9800473014 2011298.9883747604 2047863.5553289095 2145522.4421111145 1.1257617123648298 0.9863349372037827 0.9643310978346823 0.9158835637861551 0.909301386078264 0.9956935816561527 1.0393398532122256 0.9374402005302339 0.9544824678290886 1.0 21.032897561043463 -4.25168197553605 2.973393885545864 0.9626568306223581 1.1549854660532246 0.6205353889306149 0.037566177018254904 0.28621486436931376 3.6348218078862145 0.010457089377816847 0.13273327918952924 5.601676500067754e-05 4.25168197553605 0.19232863543086653 VQGGVPAGS(ph)DEYEDECPHLIALSSLNR ddPTM_KYSE-520_SHP099_60min_R1 3 VQGGVPAGSDEYEDECPHLIALSSLNR 27 0 Q9BVS4-2;Q9BVS4;H0Y919;H0Y8R4 Q9BVS4-2 RIOK2 Serine/threonine-protein kinase RIO2 1 VQGGVPAGS(1)DEYEDECPHLIALSSLNR;VQGGVPAGS(0.998)DEY(0.002)EDECPHLIALSSLNR;VQGGVPAGS(1)DEYEDECPHLIALSSLNR 173.41 1.5889e-10 1216890000.0 464282.0 428969.0 399700.0 474716.0 409152.0 328875.0 405294.0 419140.0 509331.0 439908.0 True False 438527.35193677904 408360.68534440413 425465.3015426115 519832.86591143056 441349.93464356865 326822.3691350127 446265.0728082615 417686.1011680111 416849.3295896532 436010.757363245 1.0057718634942703 0.9365839682808438 0.9758137714665421 1.192247799240312 1.0122455173184535 0.7495740956288691 1.0235184918533409 0.9579720089796604 0.9560528554628568 1.0 18.734004204400375 -6.02797384034952 24.953499303993787 0.9335923633878105 1.028008992479609 0.18159494078279348 0.09274157545138245 1239.8207242671308 1105954.7071943115 0.03156892738954556 0.03164351817670131 9.376184825066436e-07 6.02797384034952 0.09441662909179849 VQGLLENGDSVTS(ph)PEK ddPTM_KYSE-520_SHP099_60min_R1 5 VQGLLENGDSVTSPEK 16 0 P41229-4;P41229-3;P41229-2;P41229-5;P41229 P41229-4 KDM5C Lysine-specific demethylase 5C 1 VQGLLENGDSVT(0.019)S(0.981)PEK;VQGLLENGDSVT(0.014)S(0.986)PEK;VQGLLENGDSVTS(1)PEK;VQGLLENGDSVT(0.017)S(0.983)PEK;VQGLLENGDSVT(0.022)S(0.978)PEK 239.58 4.524899999999999e-23 1886360000.0 3945900.0 4274770.0 3188270.0 2915750.0 2923590.0 4217860.0 3328650.0 4051460.0 4353300.0 4429260.0 True False 3727013.0610433677 4069403.632639416 3393790.985612369 3192862.003347797 3153659.900048374 4191534.7712042695 3665142.42649341 4037406.4308778737 3562850.457762507 4390020.20231214 0.8489740113451918 0.9269669489211323 0.7730695598678394 0.7273000706616742 0.7183702476784507 0.9547871258079105 0.8348805375799978 0.9196783260248891 0.8115795129794668 1.0 22.065796148198356 -6.269828847782848 24.992438067024295 0.8948334579303971 0.8006321708570339 0.3233791465806979 0.07549769508397294 918.3258505042005 2735707.1929873885 0.02778110875252802 0.02488278664362082 5.372434783054077e-07 6.269828847782848 -0.09420128707336328 VQGS(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 2 VQGSPLK 7 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VQGS(1)PLK;VQGS(1)PLK 103.88 0.0043234 1749090000.0 3767860.0 3444970.0 2747900.0 2488350.0 2895390.0 2982910.0 2613070.0 2661720.0 3050340.0 3021760.0 True False 3558849.2947573094 3279468.470194609 2925034.0307954517 2724842.0358502953 3123240.7204844262 2964292.552235714 2877224.6167056113 2652487.1145701213 2496475.148813839 2994989.5572937056 1.188267680630283 1.0949849431722094 0.9766424806631158 0.9098001791740744 1.042821906633494 0.9897505468814624 0.9606793485134861 0.8856415235607459 0.8335505353379836 1.0 21.514119542065497 -1.0000000000000346 0.5145829845898742 0.929029451616526 10.49059096446614 0.6535439036766075 0.0576795532818276 73.76990488567492 0.7539389410196048 0.03293162354946705 767.7237274371001 0.09999999999999203 1.0000000000000346 9.561561512849615 VQGS(ph)PLKK ddPTM_KYSE-520_SHP099_60min_R1 6 VQGSPLKK 8 1 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK;VQGS(1)PLKK 103.34 0.0018591999999999999 34872300000.0 64976200.0 54767300.0 51949800.0 48582700.0 48342900.0 48104900.0 42967800.0 43466700.0 50441700.0 46936600.0 True False 61371840.65915662 52136196.7006068 55298567.23061885 53199985.201078646 52147211.19652489 47804659.47549338 47311404.54931687 43315924.16290401 41282758.811779305 46520778.24012227 1.3192350382097846 1.1207077498037523 1.188685342820127 1.1435747038985653 1.1209445148866846 1.027598017142882 1.016995122160547 0.9311091903777695 0.887404733400926 1.0 25.471371895884527 -6.191730338990527 0.7132853017784294 0.9265084373129416 1.224148926553043 0.8101624098794928 0.05311418457647182 0.2921852316419849 0.3282664537375085 0.03697967424899287 0.040075949336318424 6.430868972327479e-07 6.191730338990527 0.29764048924010134 VQHQDALQISDVVMASLLR ddPTM_KYSE-520_SHP099_60min_R1 1 VQHQDALQISDVVMASLLR 19 0 Q14974;J3KTM9;Q14974-2 Q14974 KPNB1 Importin subunit beta-1 0 84.94 0.007372 8977500.0 18005.0 15597.0 19191.0 22542.0 19900.0 18273.0 14199.0 16889.0 22341.0 12463.0 False True 17006.22675792235 14847.69670842571 20428.082566685673 24684.384902500566 21466.01678448844 18158.951428974815 15634.373488885853 16830.41600092223 18284.437570778995 12352.58751606728 1.3767339624837291 1.2019908127842032 1.6537492683305761 1.9983169413204356 1.7377749201588029 1.470052440863509 1.2656759944869753 1.3625012556300888 1.4802111336589219 1.0 13.592525656630077 -6.560911789270295 4.604714500035442 1.3101965171427234 1.5989584589447638 0.2955888807534568 0.22786142309153198 0.3206951778083284 15.7028021078545 0.09868760286807399 0.07709603135643912 2.7484523420198027e-07 6.560911789270295 0.2887619418020404 VQIPVSRPDPEPVS(ph)DNEEDS(ph)YDEEIHDPR ddPTM_KYSE-520_SHP099_60min_R1 8 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 VQIPVSRPDPEPVS(0.999)DNEEDS(0.825)Y(0.176)DEEIHDPR;VQIPVS(0.002)RPDPEPVS(0.997)DNEEDS(0.544)Y(0.458)DEEIHDPR;VQIPVSRPDPEPVS(0.999)DNEEDS(0.557)Y(0.444)DEEIHDPR;VQIPVSRPDPEPVS(1)DNEEDS(0.89)Y(0.11)DEEIHDPR;VQIPVS(0.001)RPDPEPVS(0.999)DNEEDS(0.802)Y(0.198)DEEIHDPR;VQIPVS(0.002)RPDPEPVS(0.938)DNEEDS(0.561)Y(0.499)DEEIHDPR;VQIPVSRPDPEPVS(0.999)DNEEDS(0.51)Y(0.49)DEEIHDPR;VQIPVSRPDPEPVS(1)DNEEDS(0.891)Y(0.109)DEEIHDPR 165.55 6.3665e-10 71313500000.0 7944240.0 7411000.0 7426090.0 7148500.0 7140150.0 7363900.0 6792230.0 7590470.0 8651570.0 6844190.0 True False 7503557.170750185 7054964.435862207 7904787.643564099 7827891.2907251 7702039.18310377 7317939.168599989 7478854.894176712 7564140.431199022 7080662.9763316 6783555.801299253 1.1061392270574424 1.040009788746924 1.1652867426918045 1.1539510427887725 1.1353985149836316 1.0787762912185945 1.1024977332307475 1.1150701273438723 1.043798147127417 1.0 22.693610272208183 -7.922162164901263 2.9293954122643457 1.0004020979020147 1.112588275355367 0.5440381871311588 0.03413593382531227 0.1889236768090396 3.367373925964545 0.034887533716930826 0.009416925701453287 1.1962937536250538e-08 7.922162164901263 0.11218617745335235 VQIPVSRPDPEPVS(ph)DNEEDSY(ph)DEEIHDPR ddPTM_KYSE-520_SHP099_60min_R1 6 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 2 VQIPVS(0.001)RPDPEPVS(0.949)DNEEDS(0.348)Y(0.702)DEEIHDPR;VQIPVSRPDPEPVS(0.98)DNEEDS(0.258)Y(0.762)DEEIHDPR;VQIPVSRPDPEPVS(1)DNEEDS(0.171)Y(0.829)DEEIHDPR;VQIPVSRPDPEPVS(0.984)DNEEDS(0.37)Y(0.646)DEEIHDPR;VQIPVSRPDPEPVS(1)DNEEDS(0.126)Y(0.874)DEEIHDPR;VQIPVS(0.007)RPDPEPVS(0.993)DNEEDS(0.247)Y(0.753)DEEIHDPR 194.37 8.2492e-15 41252650000.0 3358630.0 3204310.0 3168010.0 3245310.0 2915580.0 3058350.0 3103320.0 3406830.0 3739500.0 3133840.0 True False 3172320.098637083 3050370.13783263 3372224.993595217 3553743.2866619714 3145019.558619037 3039261.7032126733 3417033.8710845336 3395012.5018900973 3060501.065123675 3106076.61569063 1.021327060192855 0.9820653239599456 1.0856863531826981 1.1441260877822241 1.0125376633440666 0.9784889683208602 1.1001125515781145 1.093022781453581 0.9853269715445119 1.0 21.566661985563776 -7.784047197584193 24.993144084069403 0.992663399067611 1.0518372476651838 0.1760068031464116 0.05149836813963678 517.5436483482658 572132.8534947556 0.05288900426513356 0.0136968952837688 1.6441930284374775e-08 7.784047197584193 0.0591738485975728 VQIPVSRPDPEPVS(ph)DNEEDSYDEEIHDPR ddPTM_KYSE-520_SHP099_60min_R1 5 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 VQIPVS(0.001)RPDPEPVS(0.943)DNEEDS(0.03)Y(0.026)DEEIHDPR;VQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR;VQIPVS(0.012)RPDPEPVS(0.878)DNEEDS(0.057)Y(0.053)DEEIHDPR;VQIPVSRPDPEPVS(1)DNEEDSYDEEIHDPR;VQIPVSRPDPEPVS(0.996)DNEEDS(0.004)YDEEIHDPR 170.74 2.0399e-10 7786700000.0 2552100.0 2501990.0 2384880.0 2542570.0 2336420.0 2487680.0 2456270.0 2338970.0 2697040.0 2409370.0 True False 2410529.925514782 2381790.644836445 2538613.180742916 2784215.088348457 2520282.961588669 2472153.466361957 2704573.742485083 2330856.6589897024 2207325.5228456086 2388024.8562614927 1.0094241352615239 0.9973893858731405 1.0630597810096387 1.16590708050971 1.055383889736487 1.0352293695268189 1.1325567803005012 0.9760604680801822 0.9243310500131171 1.0 21.18738642260133 -7.418290670741099 7.02060703290695 0.9583234215044371 1.0649601102491033 0.43879670060017983 0.05128338837298693 0.2386020428549736 13.810843633921195 0.03005771085581398 0.014227485540262303 3.816887233149203e-08 7.418290670741099 0.10663668874466625 VQIPVSRPDPEPVSDNEEDS(ph)YDEEIHDPR ddPTM_KYSE-520_SHP099_60min_R1 5 VQIPVSRPDPEPVSDNEEDSYDEEIHDPR 29 1 A0A087X0K9;G5E9E7;Q07157-2;H0YKB1;G3V1L9;Q07157 A0A087X0K9;G3V1L9 TJP1 Tight junction protein ZO-1 1 VQIPVS(0.004)RPDPEPVS(0.298)DNEEDS(0.367)Y(0.331)DEEIHDPR;VQIPVSRPDPEPVS(0.223)DNEEDS(0.776)Y(0.001)DEEIHDPR;VQIPVSRPDPEPVSDNEEDS(1)YDEEIHDPR;VQIPVSRPDPEPVSDNEEDS(0.529)Y(0.471)DEEIHDPR;VQIPVSRPDPEPVS(0.002)DNEEDS(0.526)Y(0.472)DEEIHDPR 152.62 4.3509999999999997e-07 2474520000.0 959620.0 914810.0 828320.0 973990.0 901880.0 1016090.0 920980.0 918340.0 1240340.0 882766.0 True False 906387.965644956 870861.1544421946 881714.8325588588 1066557.7167592274 972852.8250047447 1009748.2054105508 1014081.6462986192 915154.4928821677 1015125.5224269289 874945.3800215565 1.0359366268356371 0.9953320222351922 1.007737000150953 1.2189991982504669 1.1119012080282955 1.1540699893582764 1.1590228023989735 1.045956140553163 1.1602158781636387 1.0 19.738833431459955 -5.224633757543734 24.76122055976461 1.1258935785356619 1.0112348385509338 0.41193969084674653 0.059201707473563674 462.45636400167217 311119.9816689635 0.015194297147595107 0.0263160277822886 5.961646799134006e-06 5.224633757543734 -0.11465873998472809 VQIS(ph)PDSGGLPER ddPTM_KYSE-520_SHP099_60min_R1 2 VQISPDSGGLPER 13 0 A0A087WTP3;Q92945;M0QXW7;M0QYH3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 1 VQIS(0.819)PDS(0.181)GGLPER;VQIS(0.768)PDS(0.232)GGLPER 170.47 6.3902e-07 3302300000.0 3441800.0 3348700.0 2801000.0 2393400.0 2711300.0 3249000.0 2582900.0 3286400.0 3923700.0 3517200.0 True False 3250876.492941801 3187823.425498827 2981556.9417584594 2620868.016398048 2924663.884813246 3228721.785844645 2844004.738674786 3275000.245451523 3211254.988427798 3486040.344340197 0.9325412708489736 0.914453968002538 0.8552846918708794 0.7518180392413387 0.8389644398584255 0.9261860067358875 0.8158266852224486 0.9394613722037639 0.9211755089528639 1.0 21.733157835357687 -7.83301236744375 1.1489989658086117 0.9963308914771825 0.8605044815832249 0.3789051261383567 0.054395392511230496 0.5092754940960548 1.4502283201072392 0.05483882781423945 0.017861634680366056 1.4688844474912821e-08 7.83301236744375 -0.13582640989395756 VQISPDS(ph)GGLPER ddPTM_KYSE-520_SHP099_60min_R1 2 VQISPDSGGLPER 13 0 A0A087WTP3;Q92945;M0QXW7;M0QYH3 A0A087WTP3 KHSRP Far upstream element-binding protein 2 1 VQIS(0.18)PDS(0.82)GGLPER;VQIS(0.496)PDS(0.504)GGLPER 156.57 2.4163e-06 3224100000.0 3036200.0 3102300.0 2353700.0 1914160.0 2058890.0 2971000.0 2221990.0 2636600.0 3279200.0 2910900.0 True False 2867775.933485356 2953260.8513527615 2505423.268053151 2096081.1908868118 2220912.9295183606 2952456.886963508 2446610.433732621 2627454.249987067 2683779.94190495 2885111.6906459276 0.9939913046636021 1.0236209783239194 0.8683973227713169 0.7265164803437938 0.7697840387666711 1.0233423186131498 0.8480123808256679 0.9106941192279543 0.930217000127332 1.0 21.460195739987636 -9.092709928718767 14.57284860051493 1.0000008222840517 0.8957086902900793 0.08966897311814825 0.09551472442826814 0.0 0.0 0.10016302137898359 0.02429310099567937 8.077743737693434e-10 9.092709928718767 -0.10429213199397247 VQKS(ph)PPEPEIINQVQQNELK ddPTM_KYSE-520_SHP099_60min_R1 2 VQKSPPEPEIINQVQQNELK 20 1 A0A3B3ITL0;Q9Y2H2;A0A3B3IRJ9;Q9Y2H2-4 A0A3B3ITL0 INPP5F Phosphatidylinositide phosphatase SAC2 1 VQKS(1)PPEPEIINQVQQNELK;VQKS(1)PPEPEIINQVQQNELK 255.68 1.3528e-27 1048710000.0 1180030.0 1140140.0 922740.0 765570.0 908850.0 1083590.0 863910.0 1090170.0 1202210.0 1185010.0 True False 1114571.383568515 1085365.9630149703 982221.2968361999 838329.5426229864 980371.3243508716 1076826.9128726982 951242.4537490933 1086388.4547175912 983918.9692478491 1174511.7333238283 0.9489657292859186 0.9240997192453936 0.8362805317036272 0.7137685549130636 0.8347054325089236 0.9168294213845907 0.8099045984471432 0.9249702867106732 0.8377259599300825 1.0 20.163629695210297 -9.499991193388324 0.6413988171358415 1.0155935340062685 0.8557387483410769 0.27471717971565923 0.06732654602431663 17.774044441033457 5.68947512209626 0.7264470382563128 0.028046392089815384 3.1623417853988127e-10 9.499991193388324 -0.15985478566519162 VQMT(ph)SPSSTGS(ph)PMFK ddPTM_KYSE-520_SHP099_60min_R1 1 VQMTSPSSTGSPMFK 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 2 VQMT(0.56)S(0.439)PS(0.003)S(0.013)T(0.01)GS(0.974)PMFK 118.47 0.00032355 325670000.0 629540.0 565270.0 551910.0 580480.0 630830.0 583320.0 606180.0 693680.0 817010.0 653340.0 True False 594618.1612431239 538113.5807124322 587487.001687223 635648.644672324 680472.7320682841 579679.2835084321 667458.5901466882 691273.7859861299 668661.5791460613 647551.9158908286 0.9182555817553495 0.8309968166369432 0.9072430908941485 0.9816180433932784 1.0508388831375268 0.8951858056214304 1.0307414336477936 1.0675187101178656 1.0325991827638907 1.0 19.304636336418625 -5.251909636757894 2.851226465878237 1.0114553328338236 0.8738632105247961 0.5842358512490649 0.048338528443655514 0.1906202922881481 3.110392302913411 0.014538664412080671 0.026040891414403213 5.598740818474084e-06 5.251909636757894 -0.1375921223090275 VQMT(ph)SPSSTGSPMFK ddPTM_KYSE-520_SHP099_60min_R1 2 VQMTSPSSTGSPMFK 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 VQMT(0.429)S(0.305)PS(0.041)S(0.057)T(0.057)GS(0.111)PMFK;VQMT(0.61)S(0.387)PS(0.001)S(0.001)T(0.001)GSPMFK 79.771 0.044472000000000005 1339290000.0 1631920.0 1979990.0 1626030.0 1408720.0 1488480.0 2581500.0 2275900.0 3432100.0 3506000.0 3193800.0 True False 1541394.1444481325 1884868.30837442 1730846.4955399875 1542604.3252528873 1605614.907707303 2565387.9009411973 2505970.1826435197 3420194.846158161 2869398.779067685 3165505.4167388044 0.4869346096510937 0.5954399251403797 0.5467836151495693 0.48731691220485196 0.5072222903859234 0.81041968444462 0.791649311162842 1.0804577455696616 0.9064583380254717 1.0 21.594004433593632 -6.606463836411968 1.4885973392671972 0.9866529110933141 0.523935668704664 0.8897362235095355 0.0708809162604203 0.11860498961442702 0.535670051094578 0.03671378940921831 0.025068446453519515 2.474777526832208e-07 6.606463836411968 -0.4627172423886501 VQMTS(ph)PSSTGS(ph)PMFK ddPTM_KYSE-520_SHP099_60min_R1 4 VQMTSPSSTGSPMFK 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 2 VQMT(0.027)S(0.971)PS(0.002)S(0.001)T(0.002)GS(0.997)PMFK;VQMT(0.131)S(0.859)PS(0.046)S(0.029)T(0.021)GS(0.913)PMFK;VQMT(0.002)S(0.971)PS(0.024)S(0.044)T(0.088)GS(0.872)PMFK;VQMT(0.002)S(0.971)PS(0.024)S(0.117)T(0.041)GS(0.846)PMFK 212.76 4.5901e-14 1427380000.0 2167050.0 2070930.0 1705740.0 1821010.0 1964080.0 2005060.0 2038290.0 2220910.0 2517210.0 2207050.0 True False 2046839.4165929267 1971439.414270695 1815694.7296804946 1994078.2428933785 2118641.9219134687 1992545.6768007558 2244340.244993389 2213206.181574289 2060148.1177002203 2187497.2540589166 0.9356991935852728 0.9012305778270923 0.8300329183551934 0.9115797696172429 0.9685232372211273 0.9108791670954436 1.025985399903474 1.0117526673314308 0.941783178871471 1.0 21.060849775271166 -6.123869122777773 1.2372046135057366 0.9911537308789363 0.8900627195267647 0.5160456515370487 0.039407243458031836 0.36837977124061927 1.1647133762477635 0.0190061847883196 0.01935313973498285 7.518494341755406e-07 6.123869122777773 -0.10109101135217158 VQMTS(ph)PSSTGSPMFK ddPTM_KYSE-520_SHP099_60min_R1 3 VQMTSPSSTGSPMFK 15 0 P49790-3;P49790;P49790-2 P49790-3 NUP153 Nuclear pore complex protein Nup153 1 VQMT(0.335)S(0.628)PS(0.029)S(0.004)T(0.004)GS(0.001)PMFK;VQMT(0.002)S(0.998)PSSTGSPMFK;VQMT(0.007)S(0.649)PS(0.076)S(0.126)T(0.126)GS(0.015)PMFK 148.57 6.4388999999999995e-06 1223500000.0 1660170.0 1884050.0 1415260.0 1510010.0 1551450.0 2620100.0 2328850.0 3206850.0 3525020.0 3235490.0 True False 1568077.0606331546 1793537.4099832952 1506489.9240960625 1653520.8963989387 1673540.2884570153 2603746.984023255 2564272.88538572 3195726.185834418 2884965.226522866 3206826.0757731306 0.4889810122474785 0.5592873974466772 0.46977599922779234 0.5156253745380603 0.5218681178565454 0.8119389460170583 0.7996295479690154 0.9965386679300852 0.8996325832317965 1.0 21.612714679753605 -6.496906216229755 1.3589384826667787 0.9545960403335975 0.4993022330225272 0.9342122177057747 0.05274632405622838 0.09459550943985263 0.35495454509786195 0.026588516123605663 0.019668067422018196 3.18488520786301e-07 6.496906216229755 -0.4552938073110703 VQNEGTGKS(ph)S(ph)WWMLNPEGGK ddPTM_KYSE-520_SHP099_60min_R1 1 VQNEGTGKSSWWMLNPEGGK 20 1 A8MYZ6;Q12778 A8MYZ6 FOXO6;FOXO1 Forkhead box protein O6;Forkhead box protein O1 2 VQNEGT(0.629)GKS(0.695)S(0.675)WWMLNPEGGK 42.611999999999995 0.06478099999999999 22965000.0 34606.0 46432.0 32149.0 28105.0 31593.0 39191.0 27297.0 41280.0 46536.0 38636.0 True False 32686.3361946493 44201.337024147106 34221.37598021872 30776.09074992364 34079.18936041926 38946.39443183668 30056.4471530472 41136.80931482441 38086.23547709462 38293.71509835314 0.8535692113104745 1.1542713186908322 0.8936551570492686 0.8036851653300987 0.889942103368416 1.0170440327298411 0.7848924314564562 1.0742444082317189 0.9945818884188794 1.0 15.224820010851952 -7.30384979880619 24.9408025410496 1.0258098624939544 0.9211450865538362 0.18802365139566746 0.10304812694803486 892.1696278532984 524664.4656463498 0.05688662511206705 0.027327728160921952 4.967640981189658e-08 7.30384979880619 -0.10466477594011825 VQNHLPASGPTQPPVVSS(ph)TNEGSPSPPEPTGK ddPTM_KYSE-520_SHP099_60min_R1 1 VQNHLPASGPTQPPVVSSTNEGSPSPPEPTGK 32 0 O43294-2;O43294;H3BQC4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 VQNHLPASGPTQPPVVS(0.025)S(0.587)T(0.224)NEGS(0.164)PS(0.001)PPEPTGK 284.56 1.3869999999999998e-53 1505500000.0 1359100.0 1683200.0 1185100.0 1297100.0 1143900.0 1523700.0 1179700.0 1424800.0 1494100.0 1706000.0 True False 1283708.0137013183 1602336.5454652898 1261493.4422270418 1420375.9940126634 1233918.4220993118 1514190.0231121837 1298955.5887624926 1419857.7013508198 1222809.103195956 1690886.1672479145 0.7591924510156002 0.9476312341434858 0.7460546231094006 0.8400186964238205 0.7297465944189708 0.8955008636546354 0.7682099563666501 0.8397121751027034 0.723176478039441 1.0 20.68934810815264 -10.223732654578763 4.672286369742194 1.000037302137778 0.8092530400032341 0.4024491605424454 0.07097646291284879 3.0624165359323047e-05 5.088030684926965e-06 0.06321528264559435 0.01532834302535188 5.974029260431424e-11 10.223732654578763 -0.1907842621345439 VQNHLPASGPTQPPVVSSTNEGS(ph)PS(ph)PPEPTGK ddPTM_KYSE-520_SHP099_60min_R1 3 VQNHLPASGPTQPPVVSSTNEGSPSPPEPTGK 32 0 O43294-2;O43294;H3BQC4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 2 VQNHLPASGPTQPPVVS(0.002)S(0.001)T(0.001)NEGS(0.996)PS(0.999)PPEPTGK;VQNHLPASGPTQPPVVS(0.01)S(0.056)T(0.037)NEGS(0.902)PS(0.993)PPEPT(0.001)GK;VQNHLPASGPTQPPVVSSTNEGS(0.999)PS(1)PPEPTGK 154.27 3.1154e-07 2358930000.0 825260.0 836490.0 778590.0 953610.0 882770.0 791350.0 728690.0 742210.0 917450.0 763200.0 True False 779481.1826849771 796303.7648029131 828779.1571880471 1044240.8076867 952238.9767257733 786410.8911136227 802353.0965290671 739635.4467431158 750864.2070324143 756438.641760615 1.030461877080645 1.0527010663409682 1.0956330248532242 1.380469941694443 1.2588449666048682 1.0396228427506653 1.0606981878418928 0.9777864401818636 0.9926306848692629 1.0 19.5288635379525 -6.423606727363918 6.1716174028553 1.0117578825731877 1.165497736591938 0.3732745480107508 0.09741143897365545 0.30462334809806135 15.832397203992956 0.039594895643909084 0.03468265249771937 3.7704507523631857e-07 6.423606727363918 0.15373985401875023 VQNHLPASGPTQPPVVSSTNEGS(ph)PSPPEPTGK ddPTM_KYSE-520_SHP099_60min_R1 2 VQNHLPASGPTQPPVVSSTNEGSPSPPEPTGK 32 0 O43294-2;O43294;H3BQC4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 VQNHLPASGPTQPPVVS(0.012)S(0.031)T(0.114)NEGS(0.836)PS(0.008)PPEPTGK;VQNHLPASGPTQPPVVS(0.001)S(0.004)T(0.013)NEGS(0.979)PS(0.003)PPEPTGK 221.1 1.0489e-22 4339900000.0 3105360.0 3514200.0 2795780.0 2778150.0 2338280.0 3417050.0 2364130.0 2967990.0 3654600.0 3582990.0 True False 2933099.490418317 3345372.557078258 2976000.452206162 3042184.5407187417 2522289.333006716 3395722.923459659 2603119.3320853407 2957694.735424075 2991016.764968843 3551247.496124035 0.8259349689424946 0.9420274314109404 0.8380155017227834 0.8566523578092194 0.7102544488266833 0.9562056508778615 0.733015464263328 0.8328607731937056 0.8422439630674435 1.0 21.759894478539213 -10.311470715583622 1.9820511274632673 1.0070049348692485 0.8376661749645828 0.31100266913361274 0.07257453933259593 92057.95692052446 74109.193747416 3768.14076993338 0.01863579763804795 4.881230142047128e-11 10.311470715583622 -0.16933875990466563 VQNHLPASGPTQPPVVSSTNEGSPS(ph)PPEPTGK ddPTM_KYSE-520_SHP099_60min_R1 4 VQNHLPASGPTQPPVVSSTNEGSPSPPEPTGK 32 0 O43294-2;O43294;H3BQC4 O43294-2 TGFB1I1 Transforming growth factor beta-1-induced transcript 1 protein 1 VQNHLPASGPTQPPVVS(0.002)S(0.007)T(0.007)NEGS(0.11)PS(0.874)PPEPT(0.001)GK;VQNHLPASGPTQPPVVSSTNEGS(0.002)PS(0.998)PPEPTGK;VQNHLPASGPTQPPVVSSTNEGS(0.042)PS(0.958)PPEPTGK;VQNHLPASGPTQPPVVSS(0.001)T(0.027)NEGS(0.244)PS(0.727)PPEPTGK 271.04 7.6378e-42 6646420000.0 1956830.0 2758470.0 1711480.0 2012170.0 1620090.0 2595180.0 1834680.0 2278690.0 2814330.0 2655850.0 True False 1848280.7390561071 2625948.9606521176 1821804.7392648198 2203406.03181903 1747581.86594884 2578982.5189868575 2020147.3591512882 2270785.756240246 2303318.615485897 2632321.2352200337 0.7021486262111207 0.9975792184925396 0.69209058335638 0.8370581836053339 0.6638938449329347 0.9797370034023535 0.7674395252836327 0.8626552587341919 0.8750142591519094 1.0 21.327904128374357 -8.381315223963824 0.5606841582127944 1.0063298142040094 0.8013078073446401 0.2404736469556933 0.10631471752162185 2.198779728433854 1.3571656979586344 0.12973403043603912 0.047038544211296045 4.156088396260069e-09 8.381315223963824 -0.20502200685936922 VQNS(ph)PPVGR ddPTM_KYSE-520_SHP099_60min_R1 6 VQNSPPVGR 9 0 D6RAA5;Q4VXL8;E7EMZ9;E9PBC6;O95359-6;O95359-1;O95359-5;O95359-3;O95359;E9PGB3;H0Y8P9;H0YA73 D6RAA5 TACC2 Transforming acidic coiled-coil-containing protein 2 1 VQNS(1)PPVGR;VQNS(1)PPVGR;VQNS(1)PPVGR;VQNS(1)PPVGR;VQNS(1)PPVGR;VQNS(1)PPVGR 117.09 0.00081915 4607630000.0 8026530.0 7074290.0 6964950.0 5758000.0 6370920.0 7229390.0 6231540.0 6677410.0 8293900.0 6739920.0 True False 7581282.380409139 6734430.489674234 7413921.821314012 6305238.588794177 6872275.158423768 7184268.695403946 6861484.877169642 6654247.623229216 6787936.832204633 6680209.552378416 1.1348869105026662 1.008116652160487 1.1098337205117115 0.9438683830732923 1.0287514342984898 1.0754555884921402 1.0271361734044233 0.9961136055769453 1.016126332412411 1.0 22.6714619288252 -1.1884916261656366 1.1507944892610757 1.0213900066076238 187.83341273196396 0.3676833406634662 0.04313578077962471 2198.3763998746244 2.3029302582770748 0.012636235250403352 1085040.4940566306 0.06479005876216098 1.1884916261656366 186.81202272535634 VQPNEAVY(ph)TK ddPTM_KYSE-520_SHP099_60min_R1 1 VQPNEAVYTK 10 0 P11413;P11413-3;P11413-2 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 1 VQPNEAVY(0.944)T(0.056)K 126.71 0.0033306999999999994 0.0 1097800.0 1058900.0 846490.0 854380.0 909200.0 977850.0 826730.0 946770.0 1153900.0 930500.0 True False 1036902.8455899565 1008028.8545586972 901056.099831887 935580.0183212857 980748.8673596439 971746.8754349585 910303.9365072622 943485.87584778 944380.8474518541 922256.4939180464 1.1243107014458147 1.0930027180142283 0.9770124751346634 1.014446658268175 1.0634231082430257 1.053662274912981 0.9870398772037855 1.0230189562987455 1.0239893713730508 1.0 19.814808516893503 -4.607039937386914 5.86417627212284 1.0205442307909092 1.1168966314823807 0.6746366978318368 0.02554885397068501 0.11094335566780371 5.865944208719421 0.0069126975798019874 0.0190242929358362 2.471496857613375e-05 4.607039937386914 0.09635240069147155 VQPQADT(ph)LEVMQLKYENFLT(ph)ALAVGK ddPTM_KYSE-520_SHP099_60min_R1 1 VQPQADTLEVMQLKYENFLTALAVGK 26 1 Q9NRC6 Q9NRC6 SPTBN5 Spectrin beta chain, non-erythrocytic 5 2 VQPQADT(0.545)LEVMQLKY(0.515)ENFLT(0.94)ALAVGK 41.76 0.059556 1560600000.0 1071200.0 923520.0 878910.0 790980.0 979990.0 893680.0 786590.0 1039400.0 1289800.0 858990.0 True False 1011778.4006157406 879152.7129682184 935565.9449057211 866154.501383191 1057109.6376196407 888102.2116262349 866106.1935786138 1035794.5639977831 1055604.8332120636 851380.0168841067 1.1883981072502292 1.0326207986249838 1.0988817289014128 1.0173535720901181 1.2416425293706872 1.043132554222408 1.0172968314999948 1.2166066192023153 1.239875040848835 1.0 19.69944370282219 -7.274014963125893 24.72150725228332 1.1711806165203942 1.0904465187707781 0.07294565620923499 0.09213416147619329 1384.0937833810176 2720882.3593393154 0.047874496430088564 0.02328129581664618 5.320899263934915e-08 7.274014963125893 -0.08073409774961604 VQPQWS(ph)PPAGTQPCR ddPTM_KYSE-520_SHP099_60min_R1 4 VQPQWSPPAGTQPCR 15 0 B4DKY1;P49589-2;P49589;P49589-3;C9JLN0;E9PRS8;E9PLP0 B4DKY1 CARS Cysteine--tRNA ligase, cytoplasmic 1 VQPQWS(0.977)PPAGT(0.023)QPCR;VQPQWS(1)PPAGTQPCR;VQPQWS(1)PPAGTQPCR;VQPQWS(0.995)PPAGT(0.005)QPCR 193.54 3.7801000000000003e-11 5977830000.0 4925610.0 4705830.0 4018910.0 3542460.0 3798680.0 4796000.0 3593740.0 4599510.0 5236240.0 4801130.0 True False 4652376.594339899 4479754.863205166 4277975.369083354 3879134.3333205683 4097614.504467366 4766066.385014129 3957030.3107224912 4583555.373343699 4285470.810868621 4758595.723422617 0.9776784717054467 0.94140270020314 0.8989995405632869 0.815184680267502 0.8610974208836887 1.0015699298754757 0.8315542106771785 0.9632159653283132 0.9005746778981045 1.0 22.18210446181624 -8.890936167252425 0.7561167520477808 1.0021904806412092 0.9053633154368181 0.1713701526868342 0.05884968945845034 7.545672667070215 4.977960307909226 0.10821225685143997 0.021114560451985176 1.2854755856887524e-09 8.890936167252425 -0.09682716520439105 VQPS(ph)PTVHTK ddPTM_KYSE-520_SHP099_60min_R1 3 VQPSPTVHTK 10 0 O43683-2;O43683-3;O43683 O43683-2 BUB1 Mitotic checkpoint serine/threonine-protein kinase BUB1 1 VQPS(0.904)PT(0.096)VHTK;VQPS(0.929)PT(0.071)VHTK;VQPS(0.943)PT(0.057)VHTK 105.03 0.00091229 977720000.0 1466940.0 1402340.0 1195520.0 973010.0 1274510.0 1415710.0 1059480.0 1142350.0 1321700.0 1304600.0 True False 1385565.9139276086 1334969.4814447453 1272585.1320996315 1065484.5778538762 1374806.6860300687 1406874.0287590388 1166582.5779283599 1138387.454476495 1081712.5973456244 1293042.2589634429 1.071555012469845 1.0324252530732545 0.9841790732499256 0.8240137323183957 1.063234149154701 1.088034067724011 0.9021998854573721 0.8803946248354438 0.8365639946004323 1.0 20.30233799513029 -6.881653789486578 9.290604077998369 0.8934423903734722 1.004183956328476 0.29185282975410043 0.07967722717897355 0.37292625198907325 28.580596118570078 0.03507050124316266 0.023632921725330925 1.3132463745007662e-07 6.881653789486578 0.11074156595500384 VQPSGGPAADQDVLGEES(ph)PLGKPAMLHLPSEQGAPETLQR ddPTM_KYSE-520_SHP099_60min_R1 2 VQPSGGPAADQDVLGEESPLGKPAMLHLPSEQGAPETLQR 40 1 C9J2V2 C9J2V2 IKBKG 1 VQPSGGPAADQDVLGEES(1)PLGKPAMLHLPSEQGAPETLQR;VQPSGGPAADQDVLGEES(1)PLGKPAMLHLPSEQGAPETLQR 163.85 1.4625e-10 1254230000.0 526360.0 542120.0 458238.0 398465.0 405494.0 524420.0 406887.0 503540.0 587900.0 481670.0 True False 497161.76152735384 516075.7414612897 487776.7546867228 436334.9937971298 437404.0708547416 521146.90025627776 448019.10879444296 501793.33726711903 481152.17975296394 477402.7785335896 1.041388496008458 1.081006991719842 1.0217300288552955 0.9139766532934614 0.9162160140715776 1.0916293823363459 0.9384509871739691 1.0510901063635374 1.0078537482142251 1.0 18.864847437515415 -4.997586819167124 17.324912356061514 0.9881055727363269 1.0587424404940589 0.22541698192387194 0.05398272997436253 2.470833044245749 17671.14506059691 0.014470885017837052 0.02942557280119034 1.0055720204929754e-05 4.997586819167124 0.07063686775773192 VQQLHSLRNS(ph)FK ddPTM_KYSE-520_SHP099_60min_R1 1 VQQLHSLRNSFK 12 1 H0YJD0;H0YJ64;Q9NYT0 H0YJD0 PLEK2 Pleckstrin-2 1 VQQLHSLRNS(1)FK 157.74 3.6522000000000004e-06 2201600000.0 960670.0 902130.0 837410.0 678980.0 718990.0 568210.0 496840.0 617820.0 942630.0 798810.0 True False 907379.7200518332 858790.3206752638 891390.7885033734 743510.0550572193 775570.4225065005 564663.5906232022 547065.435891123 615676.9266202727 771472.1537685593 791733.1648647764 1.1460675898385646 1.084696661433831 1.1258727410460543 0.9390917142951902 0.9795856191510729 0.7131993652427627 0.6909719842095521 0.7776318511621613 0.9744092934395674 1.0 19.594654760057093 -5.630602955727144 1.521490422601187 0.8154356822809158 1.1199773468902041 0.5656814620393966 0.10294754729573431 0.27336209936262756 1.3029675074814882 0.03751851872151102 0.05790007900480034 2.3409764473876306e-06 5.630602955727144 0.30454166460928833 VQRPHSS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 6 VQRPHSSPPR 10 1 R4GNF5;E9PP52;E9PMB0;E9PJ55;Q9NUJ3 R4GNF5 TCP11L1 T-complex protein 11-like protein 1 1 VQRPHS(0.111)S(0.889)PPR;VQRPHS(0.071)S(0.929)PPR;VQRPHS(0.029)S(0.971)PPR;VQRPHS(0.202)S(0.798)PPR;VQRPHS(0.061)S(0.939)PPR;VQRPHS(0.085)S(0.915)PPR 103.14 0.0010918 17953610000.0 2777980.0 2534770.0 2279640.0 2258880.0 2244620.0 2269530.0 2189780.0 2157170.0 2887260.0 2228010.0 True False 2623879.9116341625 2412995.844432665 2426589.2419529636 2473563.2760429606 2421258.823859217 2255365.0214305893 2411144.332593315 2149687.2807572647 2363006.3659015833 2208271.564765553 1.1882052703571055 1.0927079272919258 1.0988636002341445 1.1201354559422463 1.0964497584862378 1.0213259353679338 1.0918694833845313 0.9734705255716554 1.0700705491140345 1.0 21.074486169451777 -1.0000000000000009 0.17400638801193472 0.9862533869040315 1.7272798261215596 0.6290698748240764 0.03619454233121818 37.10556773289032 0.40780556987826244 0.08567802987271782 7.205525224750634 0.0999999999999998 1.0000000000000009 0.7410264392175281 VQRPS(ph)LK ddPTM_KYSE-520_SHP099_60min_R1 1 VQRPSLK 7 1 Q8IVF2;Q8IVF2-3 Q8IVF2 AHNAK2 Protein AHNAK2 1 VQRPS(1)LK 70.028 0.034488 0.0 439230.0 352110.0 305440.0 301460.0 348200.0 355670.0 280850.0 326830.0 417020.0 382330.0 True False 414865.0363167031 335194.1070721146 325129.1511212795 330110.6677627461 375601.35901300894 353450.13160091266 309241.0588318608 325696.3030126951 341299.6802187126 378942.8536482386 1.094795778103814 0.884550543294492 0.8579899264259176 0.8711357519600516 0.9911820618780386 0.9327267375492188 0.8160625166952484 0.8594865950817727 0.9006626643908978 1.0 18.53162077408778 VQS(ph)AAPAR ddPTM_KYSE-520_SHP099_60min_R1 2 VQSAAPAR 8 0 Q04637-9;Q04637;Q04637-8;Q04637-3;E7EUU4;C9J2Z7;C9K073;C9JIH5;C9JWH9;C9JHW9 Q04637-9 EIF4G1 Eukaryotic translation initiation factor 4 gamma 1 1 VQS(1)AAPAR;VQS(1)AAPAR 66.595 0.039231 1947560000.0 3444900.0 3111400.0 3052500.0 2506920.0 2899400.0 2905500.0 2667500.0 3079900.0 3637400.0 2951800.0 True False 3253804.5297621037 2961923.6736933873 3249269.034172688 2745176.9230670184 3127566.2846706407 2887365.6967594963 2937156.9322912185 3069216.545754066 2976939.8513921257 2925649.348465647 1.1121649050213611 1.0123987261996261 1.110614652393925 0.9383137198265824 1.0690161096410575 0.986914477045505 1.003933343492311 1.0490719085538096 1.0175313227312692 1.0 21.480325436017043 -1.0000000000028542 0.7435985812115192 1.0158668675835953 16.077634300046977 0.2770053551573176 0.04454361411003403 492.53980813214895 2.178326047242033 0.01563546144102989 12416.01459566374 0.09999999999934281 1.0000000000028542 15.061767432463382 VQS(ph)GSESVIQEYVDLR ddPTM_KYSE-520_SHP099_60min_R1 3 VQSGSESVIQEYVDLR 16 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 1 VQS(0.948)GS(0.052)ESVIQEYVDLR;VQS(0.999)GS(0.001)ESVIQEYVDLR;VQS(0.971)GS(0.029)ES(0.001)VIQEYVDLR 199.29 1.7976e-12 299146000.0 329479.0 390990.0 293019.0 234300.0 279284.0 309830.0 260635.0 286304.0 405977.0 298273.0 True False 311202.1430698968 372206.25351204496 311907.4735869769 256567.80155513613 301262.06189141073 307896.23604439717 286982.52935247315 285310.878247856 332261.81064733607 295630.5332728828 1.0526725356296014 1.259025072246102 1.0550583870140016 0.867866382794467 1.0190492117176873 1.0414899727566111 0.9707472573124675 0.9650927293917194 1.1239089784431726 1.0 18.173435755850843 -4.990559425701587 24.36015958689914 0.9955295198204529 1.1561471402875083 0.4007077306072707 0.07635188781268437 132.6565423458801 342294.3502568362 0.019146976537136953 0.03976922580932499 1.021975711301022e-05 4.990559425701587 0.1606176204670554 VQS(ph)HQQASEEKK ddPTM_KYSE-520_SHP099_60min_R1 1 VQSHQQASEEKK 12 1 O60566-3;O60566;O60566-2 O60566-3 BUB1B Mitotic checkpoint serine/threonine-protein kinase BUB1 beta 1 VQS(1)HQQASEEKK 111.34 0.00017932 0.0 69379.0 64896.0 75979.0 85565.0 53166.0 83006.0 69568.0 78403.0 79824.0 80078.0 True False 65530.408566392296 61778.29874911812 80876.72791069823 93697.07187394463 57349.861726839816 82487.92876448762 76600.61235825144 78131.03829239774 65329.973799286585 79368.57121974128 0.8256468216488817 0.7783723179050004 1.0190019382707727 1.1805311653467114 0.7225764662949512 1.0393021758714798 0.9651252527423428 0.9844077711325144 0.8231214546928509 1.0 16.276280214100993 -4.755568637354755 24.992258838326002 0.9676479137766621 0.8020095094048485 0.24134718696129243 0.11682899397925228 193.56472407362008 823998.5142727745 0.02949160697511694 0.0737318508047764 1.7556234076677935e-05 4.755568637354755 -0.16563840437181365 VQS(ph)LEGEKLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 VQSLEGEKLSPK 12 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VQS(1)LEGEKLS(1)PK 73.928 0.012251 410150000.0 505470.0 447220.0 389670.0 475200.0 493480.0 467150.0 457320.0 451670.0 521810.0 460230.0 True False 477430.5714705359 425734.8799090947 414788.75169404456 520362.8651259101 532314.068482882 464234.3435695065 503550.36861309066 450103.26219057076 427062.4577596427 456152.720253522 1.0466463319679165 0.9333165429167636 0.9093199125580397 1.1407645773474753 1.1669645819212275 1.0177169245236395 1.1039074113889442 0.986738086183967 0.9362269231284833 1.0 18.79915739502238 -5.2482897861029825 24.985387667507347 1.0555117743181197 0.9601164938176137 0.21882466370908682 0.07502437025951719 1198.746040743425 2277720.2536653318 0.021694504011593726 0.037283932328750234 5.645601423064862e-06 5.2482897861029825 -0.09539528050050605 VQS(ph)LKDKNEATVSTGK ddPTM_KYSE-520_SHP099_60min_R1 2 VQSLKDKNEATVSTGK 16 2 Q9Y450-2;E9PJ90;E9PN23;G5E991;E9PLR4;Q9Y450-4;Q9Y450;E9PMN1 Q9Y450-2 HBS1L HBS1-like protein 1 VQS(1)LKDKNEATVSTGK;VQS(1)LKDKNEATVSTGK 152.04 4.566e-06 1304580000.0 599000.0 581920.0 695390.0 668720.0 796860.0 773430.0 670830.0 875300.0 945180.0 894970.0 True False 565772.2759231046 553963.6897202724 740215.9520633396 732274.9477420006 859568.3484868064 768602.736480709 738644.0430698849 872263.7885965556 773559.1380488283 887041.2620761247 0.6378195695191357 0.624507239295405 0.834477474397144 0.8255252365917085 0.9690285956653044 0.8664791248625688 0.8327053933670285 0.9833407146754568 0.872066690830491 1.0 19.758641689682484 -4.889984549534897 1.6041564693982475 0.9090421489169189 0.6057370047999496 0.771757606437421 0.05888522601952669 0.192670464101306 0.9129259835216995 0.017019958799078822 0.06323821284184959 1.2882953832881224e-05 4.889984549534897 -0.3033051441169693 VQS(ph)LPSVPLSCAAYR ddPTM_KYSE-520_SHP099_60min_R1 6 VQSLPSVPLSCAAYR 15 0 Q96AD5-2;Q96AD5 Q96AD5-2 PNPLA2 Patatin-like phospholipase domain-containing protein 2 1 VQS(0.999)LPS(0.001)VPLSCAAYR;VQS(0.988)LPS(0.012)VPLSCAAYR;VQS(1)LPSVPLSCAAYR;VQS(0.641)LPS(0.359)VPLSCAAYR;VQS(0.999)LPS(0.001)VPLSCAAYR;VQS(0.998)LPS(0.002)VPLSCAAYR 289.5 4.3656999999999994e-33 3092710000.0 2628010.0 2590170.0 1968980.0 1771090.0 1845060.0 2439200.0 2042060.0 2415240.0 2784280.0 2415090.0 True False 2482229.046491945 2465734.345275567 2095903.601279388 1939413.8611023747 1990255.7250446347 2423976.0480247014 2248491.3533850424 2406862.0961612565 2278724.937987044 2393694.181511586 1.0369867068501 1.0300958093646233 0.8755937234872053 0.8102178950352216 0.8314578112847376 1.012650683093524 0.9393394405818165 1.0055010847882644 0.9519699532160201 1.0 21.190807414588257 -6.297762435892234 24.992072178507442 0.9795764982070431 0.9149423338379046 0.1677728873804316 0.07225274845366712 1289.7387327214644 887400.3251137937 0.02889362919599958 0.025482428649221563 5.037761047908926e-07 6.297762435892234 -0.06463416436913849 VQS(ph)PKPITGGLGAFTK ddPTM_KYSE-520_SHP099_60min_R1 2 VQSPKPITGGLGAFTK 16 1 Q9ULM3 Q9ULM3 YEATS2 YEATS domain-containing protein 2 1 VQS(1)PKPITGGLGAFTK;VQS(1)PKPITGGLGAFTK 160.57 4.3447e-08 2522900000.0 3217000.0 3099200.0 2444300.0 2018360.0 2070210.0 2833500.0 2261400.0 2727100.0 3172900.0 2616400.0 True False 3038546.597069489 2950309.7800059626 2601863.4890182777 2210184.327557938 2233123.7491163723 2815815.0754665406 2490004.3811371564 2717640.3266099263 2596781.3423000155 2593220.7315283995 1.171726941762733 1.1377009847777597 1.00333282754715 0.8522931737690118 0.861139093161656 1.0858370215970579 0.9601976225408282 1.0479787908406069 1.0013730457759829 1.0 21.30631358104105 -4.76857263776286 3.886479953949983 0.9712329952026809 1.1622989338898513 0.5224423516624361 0.06887725359302917 0.17064524213802593 5.622418293729372 0.019720312703132903 0.051543309244724125 1.7038343213036772e-05 4.76857263776286 0.19106593868717037 VQS(ph)TADIFGDEEGDLFK ddPTM_KYSE-520_SHP099_60min_R1 3 VQSTADIFGDEEGDLFK 17 0 A0A0A0MR88;A0A096LPC5;Q9Y4E1-6;Q9Y4E1;J3KP36;Q9Y4E1-3;Q9Y4E1-2;Q9Y4E1-1;Q9Y4E1-5;Q641Q2;E7ESD2;Q641Q2-2;F8W7U3;A0A087WYF6 A0A0A0MR88;Q641Q2 FAM21C;FAM21A WASH complex subunit FAM21C;WASH complex subunit FAM21A 1 VQS(0.993)T(0.007)ADIFGDEEGDLFK;VQS(0.987)T(0.013)ADIFGDEEGDLFK;VQS(0.977)T(0.023)ADIFGDEEGDLFK 263.19 1.6353e-29 58794000.0 246657.0 211266.0 166328.0 149430.0 173497.0 241767.0 246309.0 313700.0 339757.0 320526.0 True False 232974.44451146107 201116.46424326906 177049.76901420948 163631.78227223243 187150.226837105 240258.042474085 271208.3174641865 312611.8479181304 278065.69337698194 317686.3890054542 0.7333472650207286 0.633066039980127 0.5573098978790992 0.5150733173822664 0.5891036988490304 0.7562742716999441 0.8536982598254478 0.9840265706591645 0.875283622466457 1.0 18.277243754809334 -6.647351643513576 1.8705986644618187 0.9445728192731615 0.5992405794799951 0.8512827446871015 0.0640572369862498 0.13118653629629365 0.9374722573843498 0.033325514864225025 0.022968477884043534 2.2524147179418115e-07 6.647351643513576 -0.3453322397931664 VQSGMGLILQGY(ph)ESGS(ph)EEEGEIHEK ddPTM_KYSE-520_SHP099_60min_R1 1 VQSGMGLILQGYESGSEEEGEIHEK 25 0 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 VQSGMGLILQGY(0.569)ES(0.526)GS(0.905)EEEGEIHEK 67.69 0.038879000000000004 25228000.0 46503.0 51497.0 45741.0 46006.0 41111.0 43117.0 44494.0 47532.0 62871.0 51423.0 True False 43923.3858885678 49023.00682142711 48689.53804818766 50378.39640779174 44346.20181040726 42847.89080956093 48991.88773959345 47367.12258605217 51455.21124893447 50967.43222648864 0.8617931877239063 0.9618496494698632 0.9553068679587683 0.9884428978866475 0.8700889935624379 0.8406915737711453 0.9612390814958798 0.9293605841385644 1.0095704060639792 1.0 15.637288050677233 -7.734186869860039 5.392691595854038 1.0057633175010348 0.9223670161316663 0.3408457127391632 0.04655558933411952 0.20646224889659776 16.049425505969573 0.03840729853333035 0.012620384086928432 1.8442217097909905e-08 7.734186869860039 -0.08339630136936849 VQSGMGLILQGYES(ph)GS(ph)EEEGEIHEK ddPTM_KYSE-520_SHP099_60min_R1 31 VQSGMGLILQGYESGSEEEGEIHEK 25 0 Q13523 Q13523 PRPF4B Serine/threonine-protein kinase PRP4 homolog 2 VQS(0.001)GMGLILQGY(0.01)ES(0.994)GS(0.995)EEEGEIHEK;VQSGMGLILQGY(0.01)ES(0.993)GS(0.997)EEEGEIHEK;VQSGMGLILQGY(0.104)ES(0.918)GS(0.978)EEEGEIHEK;VQSGMGLILQGY(0.011)ES(0.991)GS(0.998)EEEGEIHEK;VQSGMGLILQGY(0.037)ES(0.982)GS(0.982)EEEGEIHEK;VQSGMGLILQGY(0.074)ES(0.963)GS(0.963)EEEGEIHEK;VQSGMGLILQGYES(1)GS(1)EEEGEIHEK;VQS(0.001)GMGLILQGY(0.081)ES(0.959)GS(0.959)EEEGEIHEK;VQSGMGLILQGY(0.016)ES(0.992)GS(0.992)EEEGEIHEK;VQSGMGLILQGY(0.002)ES(0.999)GS(1)EEEGEIHEK;VQSGMGLILQGY(0.004)ES(0.996)GS(1)EEEGEIHEK;VQSGMGLILQGY(0.054)ES(0.962)GS(0.984)EEEGEIHEK;VQSGMGLILQGY(0.149)ES(0.859)GS(0.991)EEEGEIHEK;VQSGMGLILQGY(0.328)ES(0.784)GS(0.889)EEEGEIHEK;VQSGMGLILQGYES(1)GS(1)EEEGEIHEK;VQSGMGLILQGY(0.001)ES(1)GS(1)EEEGEIHEK;VQSGMGLILQGY(0.01)ES(0.993)GS(0.997)EEEGEIHEK;VQSGMGLILQGY(0.016)ES(0.986)GS(0.998)EEEGEIHEK;VQSGMGLILQGY(0.1)ES(0.95)GS(0.95)EEEGEIHEK;VQSGMGLILQGY(0.001)ES(0.999)GS(1)EEEGEIHEK;VQSGMGLILQGY(0.017)ES(0.986)GS(0.996)EEEGEIHEK;VQSGMGLILQGY(0.001)ES(0.999)GS(1)EEEGEIHEK;VQSGMGLILQGY(0.006)ES(0.995)GS(0.999)EEEGEIHEK;VQSGMGLILQGY(0.004)ES(0.996)GS(1)EEEGEIHEK;VQSGMGLILQGY(0.013)ES(0.989)GS(0.998)EEEGEIHEK;VQSGMGLILQGY(0.007)ES(0.994)GS(0.999)EEEGEIHEK;VQSGMGLILQGY(0.003)ES(0.997)GS(1)EEEGEIHEK;VQSGMGLILQGY(0.005)ES(0.996)GS(0.999)EEEGEIHEK;VQSGMGLILQGY(0.024)ES(0.988)GS(0.988)EEEGEIHEK;VQS(0.003)GMGLILQGY(0.171)ES(0.913)GS(0.913)EEEGEIHEK;VQS(0.001)GMGLILQGY(0.018)ES(0.989)GS(0.993)EEEGEIHEK 178.89 5.3523999999999995e-11 7694359000.0 11384944.0 11607827.0 10500000.0 10756467.0 10841699.0 10150864.0 9837444.0 11229337.0 14110668.0 10871401.0 True False 10753398.460996795 11050169.567216445 11176846.800593998 11778758.389630273 11694879.030470928 10087508.69250418 10831908.843721332 11190385.050893972 11548526.392193211 10775088.844961992 0.9979869879239708 1.0255293228865645 1.0372858137332068 1.0931472175412789 1.0853626544285055 0.9361879830086695 1.0052732742696509 1.0385422535171167 1.0717801549815387 1.0 23.36119642917859 -10.842565433133423 2.4811622609289703 0.9869098037958386 1.0321945736293952 0.04643156094545586 0.04396806598296574 24484159.77374451 15336649.301793661 1903974.8947944047 0.01257009861313227 1.436926541995114e-11 10.842565433133423 0.04528476983355656 VQSLEGEKLS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 13 VQSLEGEKLSPK 12 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK;VQSLEGEKLS(1)PK 233.21 5.6871000000000005e-15 126928800000.0 36556080.0 30563230.0 28478340.0 29237330.0 29873460.0 30661890.0 30128960.0 33693720.0 36196470.0 30434130.0 True False 34528241.36966124 29094926.554456484 30314099.36335508 32016037.052676197 32224331.345263503 30470517.771059427 33174689.30711334 33576844.349493325 29624103.486754164 30164507.285594855 1.1446645238641209 0.9645417469938535 1.0049592083949492 1.061381071122801 1.0682863485939424 1.0101447201695455 1.0997921826807364 1.11312424338945 0.9820847795150707 1.0 24.846348681436414 -5.299044795786349 24.63413327578931 1.0539911487838949 1.0307037797551288 0.0 0.05821404512754671 1971.0006166342794 1291137.6647923333 0.016056239113840066 0.023815757748804067 5.022907775106023e-06 5.299044795786349 -0.023287369028766047 VQSLEGEKLS(ph)PKS(ph)DIS(ph)PLT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 VQSLEGEKLSPKSDISPLTPR 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 4 VQS(0.012)LEGEKLS(0.989)PKS(1)DIS(1)PLT(1)PR;VQS(0.001)LEGEKLS(0.999)PKS(1)DIS(1)PLT(1)PR;VQS(0.009)LEGEKLS(0.992)PKS(0.999)DIS(1)PLT(1)PR;VQSLEGEKLS(1)PKS(1)DIS(1)PLT(1)PR;VQS(0.001)LEGEKLS(0.999)PKS(1)DIS(1)PLT(1)PR;VQS(0.041)LEGEKLS(0.96)PKS(0.999)DIS(1)PLT(1)PR;VQS(0.001)LEGEKLS(0.999)PKS(1)DIS(1)PLT(1)PR;VQS(0.067)LEGEKLS(0.939)PKS(0.995)DIS(0.999)PLT(1)PR 146.5 2.4653999999999997e-06 22952500000.0 12957030.0 12256630.0 11334100.0 12546170.0 12281740.0 11634080.0 11179890.0 12993310.0 15863890.0 12241200.0 True False 12238277.716701062 11667803.097223293 12064714.2212012 13738554.224656437 13248243.064458445 11561467.391277144 12310062.386411726 12948239.240271352 12983407.472123219 12132752.491509477 1.0086975503098272 0.9616781604494482 0.9943921817942062 1.1323526326174298 1.0919404375659678 0.9529138090773616 1.0146141524791124 1.0672136639507444 1.070112283359364 1.0 23.532403548171732 -5.027897624983344 24.585828746346195 1.0477256891044902 0.9833996464550837 0.23718761331245097 0.04844875546608404 815.1445478083536 718376.9269529991 0.014031415891717122 0.02438062237245022 9.377830418315883e-06 5.027897624983344 -0.06432604264940645 VQSLEGEKLS(ph)PKS(ph)DIS(ph)PLTPR ddPTM_KYSE-520_SHP099_60min_R1 1 VQSLEGEKLSPKSDISPLTPR 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 VQS(0.009)LEGEKLS(0.991)PKS(1)DIS(0.983)PLT(0.017)PR 88.66799999999999 0.0073658000000000005 5392400000.0 1051500.0 1016400.0 951220.0 949940.0 1047100.0 920210.0 818980.0 885410.0 1220600.0 981000.0 True False 993171.1988867163 967570.6183524968 1012537.1632058118 1040222.0119901235 1129500.8128159726 914466.6280554325 901770.4908745508 882338.7193662483 998969.8088220225 972309.1032064513 1.0214562381566383 0.9951265653706953 1.0413737358487107 1.0698470358445797 1.1616684540864004 0.9405101989066361 0.927452481829821 0.907467302791364 1.0274199897210161 1.0 19.89105550305359 -6.3216769691827706 24.99995140978086 0.95271676725184 1.0541539263824204 0.461647615796029 0.05212815563819643 229.72025381222096 95338.14644360017 0.019212557409003725 0.016943885455302923 4.767854908302211e-07 6.3216769691827706 0.10143715913058049 VQSLEGEKLS(ph)PKS(ph)DISPLT(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 8 VQSLEGEKLSPKSDISPLTPR 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 VQSLEGEKLS(1)PKS(1)DIS(0.064)PLT(0.936)PR;VQS(0.009)LEGEKLS(0.994)PKS(0.997)DIS(0.177)PLT(0.824)PR;VQS(0.006)LEGEKLS(0.994)PKS(0.994)DIS(0.007)PLT(0.998)PR;VQS(0.003)LEGEKLS(0.997)PKS(0.992)DIS(0.016)PLT(0.992)PR;VQS(0.005)LEGEKLS(0.995)PKS(1)DIS(0.002)PLT(0.998)PR;VQS(0.002)LEGEKLS(0.973)PKS(0.812)DIS(0.517)PLT(0.695)PR;VQS(0.054)LEGEKLS(0.946)PKS(0.947)DIS(0.143)PLT(0.909)PR;VQS(0.182)LEGEKLS(0.821)PKS(0.997)DIS(0.062)PLT(0.939)PR 94.15 0.0042469 22505930000.0 7629830.0 7371290.0 7090890.0 6821350.0 7072080.0 6460100.0 6531450.0 7097510.0 9619340.0 6849830.0 True False 7206588.120210973 7017162.163868144 7547980.115225149 7469649.053086341 7628612.461369107 6419780.119647571 7191712.706809181 7072890.394381288 7872710.3398279855 6789145.835287101 1.0614867164517492 1.0335854221006582 1.111771686504943 1.1002339961917262 1.123648341993011 0.9455946705814267 1.0592956582888098 1.041793852419461 1.1596024788433585 1.0 22.694798645014806 VQSLEGEKLS(ph)PKS(ph)DISPLTPR ddPTM_KYSE-520_SHP099_60min_R1 3 VQSLEGEKLSPKSDISPLTPR 21 2 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VQSLEGEKLS(1)PKS(0.995)DIS(0.005)PLTPR;VQSLEGEKLS(1)PKS(0.995)DIS(0.005)PLTPR;VQS(0.007)LEGEKLS(0.993)PKS(0.99)DIS(0.009)PLT(0.001)PR 124.08 3.8206e-05 2185460000.0 1590000.0 1496820.0 1541750.0 1241190.0 1417890.0 1450280.0 1301290.0 1363590.0 1948090.0 1475990.0 True False 1501799.530413582 1424910.5204273753 1641133.6718872199 1359152.3244226202 1529469.8763094621 1441228.2645659507 1432837.09256654 1358860.0245542976 1594365.9633525293 1462913.876902844 1.0265809588142423 0.9740221505342979 1.1218252132255984 0.9290720020375369 1.0454955007655848 0.9851764258448322 0.979440495567668 0.9288721954235335 1.089856339819528 1.0 20.48041340850499 -5.284767350204323 24.998397867335648 0.9921968217457754 1.0341307595095195 0.12200512815231312 0.056573977469918206 1747.2478877325086 1872359.6853040336 0.015232268447494908 0.02260392788856374 5.190780324627662e-06 5.284767350204323 0.0419339377637441 VQSWS(ph)PPVR ddPTM_KYSE-520_SHP099_60min_R1 3 VQSWSPPVR 9 0 Q7Z6J0;Q7Z6J0-3 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 1 VQS(0.009)WS(0.991)PPVR;VQS(0.001)WS(0.999)PPVR;VQS(0.005)WS(0.995)PPVR 85.885 0.0048328 293960000.0 704830.0 717170.0 657060.0 557410.0 653750.0 642700.0 629140.0 680040.0 875060.0 669160.0 True False 665731.6748562288 682716.0767058841 699415.1389331706 610386.0788085732 705196.4056713227 638688.6709025401 692739.6110146941 677681.0999625286 716171.1624674742 663231.7629986017 1.0037692885007867 1.0293778356138885 1.0545561566155648 0.9203209388659211 1.0632729688382092 0.9629946973813537 1.0444910055011263 1.021786255981768 1.0798203620850773 1.0 19.339153575394807 VQT(ph)PEVDVK ddPTM_KYSE-520_SHP099_60min_R1 2 VQTPEVDVK 9 0 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VQT(1)PEVDVK;VQT(1)PEVDVK 106.79 0.0066366 941450000.0 1926960.0 2402100.0 1725220.0 1512500.0 1541440.0 1977180.0 1615870.0 2028260.0 2491200.0 2217700.0 True False 1820067.6875004743 2286699.5103743905 1836430.4416495971 1656247.545250292 1662742.5584061255 1964839.6862223202 1779217.9089714754 2021224.4394594447 2038860.8780414748 2198052.903344492 0.8280363428610445 1.0403296057592684 0.8354805468309426 0.7535066798120259 0.7564615737301618 0.8939000891346511 0.8094518135865931 0.9195522256921158 0.9275758899793561 1.0 21.06779467921198 -7.783240946975662 1.4926459844485627 0.9944831037465893 0.8473657230643818 0.2887538124365263 0.07771713313800198 0.5358300809117538 2.429221894393152 0.07875890793395164 0.02403339725009901 1.647248243132306e-08 7.783240946975662 -0.14711738068220748 VQT(ph)PLLR ddPTM_KYSE-520_SHP099_60min_R1 4 VQTPLLR 7 0 Q9UHD8;Q9UHD8-7;Q9UHD8-2;Q9UHD8-5;K7ENL0;K7EJV0;K7EPY1 Q9UHD8 SEPT9 Septin-9 1 VQT(1)PLLR;VQT(1)PLLR;VQT(1)PLLR;VQT(1)PLLR 146.48 0.0069191 2385790000.0 838730.0 895240.0 771280.0 721030.0 688390.0 783700.0 725760.0 850440.0 893500.0 864320.0 True False 792203.9749331962 852231.3266173643 820997.9428916326 789556.4744144261 742562.376596683 778808.637601246 799126.9035350238 847490.0221341882 731262.9233020467 856662.7972307852 0.9247558986967146 0.9948270537395274 0.9583676862653059 0.9216654172058313 0.8668082459014926 0.909119247525155 0.9328371748116648 0.9892924320674966 0.8536181630227188 1.0 19.708367911568594 -5.239943110492674 5.78417470688655 0.9215277126775748 0.9632724924672256 0.10198605674877492 0.04596590246595174 0.3539554105510318 42.13490044264151 0.012404485591369283 0.020924839855889693 5.755153208387057e-06 5.239943110492674 0.04174477978965074 VQT(ph)TPSKPGGDR ddPTM_KYSE-520_SHP099_60min_R1 6 VQTTPSKPGGDR 12 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 VQT(0.957)T(0.041)PS(0.002)KPGGDR;VQT(0.5)T(0.5)PS(0.001)KPGGDR;VQT(0.457)T(0.457)PS(0.085)KPGGDR;VQT(0.458)T(0.458)PS(0.085)KPGGDR;VQT(0.455)T(0.455)PS(0.089)KPGGDR;VQT(0.455)T(0.455)PS(0.089)KPGGDR 168.31 8.080099999999999e-06 24052330000.0 13413750.0 13440670.0 11143470.0 9633480.0 9251400.0 11573580.0 9795950.0 11107280.0 13450850.0 12004230.0 True False 12669662.547852317 12794960.038343033 11861795.906382408 10549043.042788621 9979432.546734495 11501344.994218493 10786220.225258907 11068751.43813863 11008514.708335003 11897881.861349618 1.064867065877485 1.0753981412361793 0.9969670269559125 0.8866320212051598 0.8387570714710806 0.9666716419147446 0.9065664250960539 0.930312770552511 0.9252499593306828 1.0 23.504201422608627 -4.998070611698276 3.3974349186862587 0.9173058130644686 1.0687531891230915 0.6744735701003133 0.04127887168451757 0.12802408136998636 3.120852010687105 0.01134626504199432 0.024370042637715715 1.004452463633733e-05 4.998070611698276 0.1514473760586229 VQTLSNQPLLKS(ph)PAPPLLHVAALGQK ddPTM_KYSE-520_SHP099_60min_R1 1 VQTLSNQPLLKSPAPPLLHVAALGQK 26 1 Q8N163-2;Q8N163;H0YC69;E5RGU7;E5RFJ3;H0YC58 Q8N163-2 CCAR2 Cell cycle and apoptosis regulator protein 2 1 VQT(0.024)LS(0.09)NQPLLKS(0.885)PAPPLLHVAALGQK 159.75 3.2801999999999997e-10 925830000.0 310220.0 413590.0 357350.0 272990.0 278240.0 360120.0 241620.0 311890.0 453370.0 253070.0 True False 293011.4781917619 393720.5155887532 380385.3527802155 298934.88752256345 300135.90503095824 357872.35750026896 266045.30758395646 310808.1263856734 371049.43652764306 250827.99668548055 1.1681769262750052 1.5696832921025523 1.516518721222297 1.1917923496291578 1.1965805611695974 1.4267640065276046 1.0606683109523745 1.2391285282854745 1.4792983296554059 1.0 17.936338860954258 -5.268213696160123 24.748348121472887 1.2377432329379452 1.4332820121601666 0.2097216988962124 0.16780263424204164 690.3721631412822 2522110.4790384467 0.045820256716816096 0.06975752906247988 5.392452196765688e-06 5.268213696160123 0.1955387792222214 VQTT(ph)PPPAVQGQK ddPTM_KYSE-520_SHP099_60min_R1 8 VQTTPPPAVQGQK 13 0 Q2M2I8;Q2M2I8-2;E9PG46 Q2M2I8 AAK1 AP2-associated protein kinase 1 1 VQT(0.163)T(0.837)PPPAVQGQK;VQT(0.037)T(0.963)PPPAVQGQK;VQT(0.003)T(0.997)PPPAVQGQK;VQT(0.029)T(0.971)PPPAVQGQK;VQT(0.003)T(0.997)PPPAVQGQK;VQT(0.003)T(0.997)PPPAVQGQK;VQT(0.001)T(0.999)PPPAVQGQK;VQT(0.034)T(0.966)PPPAVQGQK 209.22 1.8956999999999997e-10 12524290000.0 9689060.0 12661950.0 8715440.0 7145610.0 7948740.0 11728410.0 8339620.0 11105010.0 12542250.0 11618670.0 True False 9151588.527137753 12053650.916025579 9277251.20759704 7824726.625994007 8574260.615856016 11655208.64275721 9182670.176447788 11066489.31223883 10264893.564392945 11515737.622988487 0.7947027647511471 1.0467111452733409 0.8056150210540721 0.6794811485087819 0.7445689452614397 1.0121113405267503 0.79740182323334 0.9609883165579565 0.891379597247985 1.0 23.457103487929796 -6.255956358776952 24.987540221457103 0.9215020853715691 0.819169135825365 0.23732762595992052 0.10482126562415804 866.424293008799 3948525.037814286 0.03729554162526637 0.03627902705058808 5.546814487814709e-07 6.255956358776952 -0.10233294954620409 VQTT(ph)PSKPGGDR ddPTM_KYSE-520_SHP099_60min_R1 5 VQTTPSKPGGDR 12 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 VQT(0.18)T(0.818)PS(0.002)KPGGDR;VQT(0.326)T(0.674)PSKPGGDR;VQT(0.211)T(0.746)PS(0.042)KPGGDR;VQT(0.09)T(0.746)PS(0.164)KPGGDR;VQT(0.02)T(0.778)PS(0.202)KPGGDR 153.81 3.9855e-05 28043300000.0 14857790.0 15506350.0 13243940.0 11228240.0 11395280.0 13804760.0 11692760.0 13030800.0 15495050.0 14510900.0 True False 14033598.77042994 14761401.670494122 14097665.563453233 12295368.553706551 12292023.705725895 13718599.372224277 12874778.29114056 12985599.196211588 12681539.518423487 14382344.715309365 0.9757518018249 1.0263557133894357 0.9802063462188398 0.8548931900247586 0.8546606237744798 0.9538499906500947 0.895179370679103 0.9028847140890036 0.8817435383066958 1.0 23.777795557888407 -5.106516646518726 5.757698374355932 0.9017902535809762 1.0015765529756722 0.46850805382410443 0.04306582341788977 0.17610150309673506 7.9586481382186225 0.011356568696178442 0.020114738820412984 7.824982113151035e-06 5.106516646518726 0.09978629939469597 VQTTPS(ph)KPGGDR ddPTM_KYSE-520_SHP099_60min_R1 2 VQTTPSKPGGDR 12 1 Q12834 Q12834 CDC20 Cell division cycle protein 20 homolog 1 VQT(0.07)T(0.329)PS(0.601)KPGGDR;VQT(0.214)T(0.219)PS(0.567)KPGGDR 130.31 0.00010646 15895200000.0 6630500.0 6798100.0 5773300.0 4904300.0 4863700.0 5697000.0 5143200.0 5674900.0 6782400.0 6086300.0 True False 6262692.947425949 6471509.071843873 6145456.155606611 5370403.197468435 5246445.51933249 5661442.90980515 5663124.8487948235 5655215.096431617 5550887.1303903805 6032380.117069749 1.0381794293274866 1.072795305708857 1.018744846369494 0.8902627310026227 0.8697140129625933 0.9385089798610398 0.9387877983302065 0.9374765824900733 0.920181922005065 1.0 22.52429590902711 -5.108193574179372 4.450556643356508 0.9240939388298919 1.0537402727095149 0.718019629789375 0.03351917435657224 0.11191359053532862 3.6163674205092935 0.009305603053018953 0.016991544603944787 7.794826013029533e-06 5.108193574179372 0.129646333879623 VQVEYK ddPTM_KYSE-520_SHP099_60min_R1 2 VQVEYK 6 0 E9PKE3;P11142;P11142-2;E9PN89;P54652;E9PLF4;E9PPY6;E9PQQ4;E9PQK7;E9PK54;E9PN25 E9PKE3 HSPA8;HSPA2 Heat shock cognate 71 kDa protein;Heat shock-related 70 kDa protein 2 0 ; 119.89 0.061780999999999996 2832400000.0 4978300.0 5591400.0 3925400.0 3550000.0 5319300.0 5507500.0 4337200.0 5387700.0 4850400.0 4680600.0 False True 4702143.77500499 5322780.751137498 4178437.5648620683 3887390.9326535803 5737898.647323079 5473125.649596602 4775646.502992864 5369011.32619863 3969689.628633742 4639133.525451697 1.0135823315297134 1.1473652831795214 0.9006935329491788 0.8379562500898435 1.2368470568573253 1.1797732528217544 1.0294263954232432 1.157330630114999 0.8556963508066361 1.0 22.14542394035234 -3.9455798014349637 16.119462919945505 1.045242348963663 0.7749734956289352 0.0006855324879042612 0.13412322379903407 50736204.728859946 355534783.0154644 0.034262407520134784 438711428.90111965 0.00011334965394390567 3.9455798014349637 -0.27026885333472783 VQWVFIGT(ph)IMAHR ddPTM_KYSE-520_SHP099_60min_R1 2 VQWVFIGTIMAHR 13 0 E9PE85 E9PE85 COMMD1 1 VQWVFIGT(1)IMAHR;VQWVFIGT(1)IMAHR 48.898999999999994 0.051322 11715200000.0 5782100.0 4713500.0 4627400.0 3434500.0 4996100.0 4625300.0 4930300.0 4874000.0 5244300.0 4738800.0 True False 5461355.386669409 4487056.384892258 4925689.608101784 3760913.847379919 5389264.646079534 4596431.787032085 5428702.839091056 4857093.231600154 4292067.318044684 4696817.91873061 1.16277775318687 0.9553396496377182 1.0487290955986284 0.8007365651501275 1.1474289059806833 0.9786267780792199 1.155825695827325 1.0341242338201735 0.9138245067853692 1.0 22.163252235128493 VRANS(ph)KS(ph)EGSPVLPHEPAK ddPTM_KYSE-520_SHP099_60min_R1 2 VRANSKSEGSPVLPHEPAK 19 2 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4;Q9UKE5-5;Q9UKE5-8;Q9UKE5-3;Q9UKE5-7 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 2 VRANS(0.678)KS(0.718)EGS(0.604)PVLPHEPAK;VRANS(0.914)KS(0.935)EGS(0.151)PVLPHEPAK 93.633 0.00051896 1344730000.0 510110.0 445820.0 521110.0 488350.0 445940.0 420300.0 449600.0 455730.0 570210.0 452970.0 True False 481813.18142092566 424402.1380105373 554701.5844054805 534762.6371722181 481032.9409484818 417676.75179763156 495049.9556731521 454149.178998182 466674.23782435415 448957.0382053279 1.0731832679290156 0.945306793066555 1.2355337753983289 1.191122071078096 1.0714453723041628 0.9303267712814195 1.1026666552596596 1.0115648945244502 1.0394630178643585 1.0 18.776217870998842 -6.004344736189086 24.949896440278085 1.0204482031216549 1.1111778621128052 0.23031820488496546 0.08157979048824318 308.32856128668175 1770609.61932476 0.027048455160126616 0.029928205484293483 9.90045750017875e-07 6.004344736189086 0.09072965899115037 VRANS(ph)KSEGS(ph)PVLPHEPAK ddPTM_KYSE-520_SHP099_60min_R1 4 VRANSKSEGSPVLPHEPAK 19 2 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4;Q9UKE5-5;Q9UKE5-8;Q9UKE5-3;Q9UKE5-7 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 2 VRANS(0.872)KS(0.22)EGS(0.908)PVLPHEPAK;VRANS(0.904)KS(0.1)EGS(0.996)PVLPHEPAK;VRANS(0.796)KS(0.228)EGS(0.976)PVLPHEPAK;VRANS(0.781)KS(0.294)EGS(0.925)PVLPHEPAK 129.93 6.957100000000001e-06 3641240000.0 3376600.0 3582420.0 3700730.0 3169730.0 3208960.0 3128800.0 2839160.0 3062150.0 4495190.0 2921800.0 True False 3189293.266914776 3410315.165877953 3939284.9771773596 3470980.1861859215 3461486.8955151807 3109271.998630568 3126170.0003313716 3051528.116361183 3678976.810518329 2895915.125126005 1.1013075760554294 1.1776295293632149 1.36029020429456 1.1985780094417977 1.1952998433835544 1.0736751128005795 1.0795102291526406 1.0537353425468252 1.2704021532254859 1.0 21.46558788916443 -6.159797724607404 4.452896248752838 1.0980082920273349 1.215609092572542 0.28237063920296035 0.08836796925652177 0.3147569506587866 10.48845084305052 0.030213746713067317 0.030188808378334084 6.921532706054465e-07 6.159797724607404 0.11760080054520716 VRANSKS(ph)EGS(ph)PVLPHEPAK ddPTM_KYSE-520_SHP099_60min_R1 1 VRANSKSEGSPVLPHEPAK 19 2 Q9UKE5-2;Q9UKE5-6;Q9UKE5;Q9UKE5-4;Q9UKE5-5;Q9UKE5-8;Q9UKE5-3;Q9UKE5-7 Q9UKE5-2 TNIK TRAF2 and NCK-interacting protein kinase 2 VRANS(0.118)KS(0.955)EGS(0.927)PVLPHEPAK 102.94 0.00023224 1022100000.0 392330.0 454410.0 459260.0 386200.0 335440.0 361350.0 332590.0 355390.0 545770.0 341240.0 True False 370566.67280953476 432579.4615166842 488864.6344419807 422904.3318847358 361837.21960747783 359094.6806140233 366211.4429655998 354157.23503864923 446671.925742091 338216.8790807027 1.0956480759232392 1.2790002163477636 1.4454176141969886 1.2503939278081553 1.0698378525370373 1.0617290349023027 1.082771043127677 1.0471305749177082 1.320667161722315 1.0 18.36758913524436 -5.6916704655629795 5.469852181519153 1.097024422402893 1.2845232760150618 0.35505135077336814 0.11230705721953578 0.22087809425202448 12.073826345343978 0.033945374684743755 0.043657856409973585 2.0338997102001146e-06 5.6916704655629795 0.18749885361216867 VRDVFEAK ddPTM_KYSE-520_SHP099_60min_R1 2 VRDVFEAK 8 1 P12268;H0Y4R1;E7ETK5 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 0 ; 99.815 0.0030158000000000003 1853640000.0 2246540.0 1889170.0 1343850.0 1145440.0 2106920.0 2311980.0 1624340.0 1870090.0 1904410.0 1763780.0 False True 2121919.947833541 1798411.4374980174 1430476.7212360252 1254302.2732109076 2272722.6172650456 2297550.075234561 1788544.139230709 1863603.0942722892 1558617.1502693342 1748154.281400076 1.213805881099991 1.0287486960577021 0.8182783044127966 0.7175009016975045 1.3000698173188976 1.3142719150591677 1.0231042867671183 1.0660404027839874 0.8915787163939879 1.0 20.737401083217996 -4.264139046098278 7.234650142692923 1.022270492233092 1.2161300346654285 0.0981555594897281 0.1778884716960097 0.281656607722734 129.14817833872436 0.048725699310116534 0.27297814466055853 5.443283497973483e-05 4.264139046098278 0.19385954243233638 VREEEIEVDSR ddPTM_KYSE-520_SHP099_60min_R1 1 VREEEIEVDSR 11 1 A0A0A0MRM9;Q14978;Q14978-3;Q14978-2 A0A0A0MRM9 NOLC1 Nucleolar and coiled-body phosphoprotein 1 0 105.65 0.00092508 460750000.0 647460.0 640900.0 408940.0 367750.0 566560.0 575740.0 485710.0 501790.0 539900.0 565750.0 False True 611544.1031204883 610110.2019894881 435300.9267271349 402700.84943193104 611145.0487145621 572146.5931000911 534810.30687279 500049.4076086664 441867.769771433 560737.8951468404 1.090605982605016 1.0880488143747065 0.7763001760620133 0.7181623587727664 1.0898943231837783 1.0203458657814863 0.9537616620912329 0.8917703118276294 0.7880112501683539 1.0 19.096967046101245 -4.728616680982466 24.095478557399446 0.9067383240813833 1.0893280820704618 0.304727170699852 0.11147204620195114 172.26692849384924 126459.32231187045 0.03054910543702404 0.08080969340273939 1.868027730759925e-05 4.728616680982466 0.1825897579890785 VREEFK ddPTM_KYSE-520_SHP099_60min_R1 5 VREEFK 6 1 P02545-3;P02545;P02545-2;P02545-6;Q3BDU5 P02545-3 LMNA Prelamin-A/C;Lamin-A/C 0 ;;;; 88.029 0.017656 9480940000.0 9745190.0 8470730.0 5911920.0 5378920.0 8540510.0 8129880.0 6119020.0 7248040.0 7248960.0 6902300.0 False True 9204604.884145368 8063783.415975049 6293011.822606453 5890130.939568737 9212599.548145305 8079138.403294128 6737590.257480263 7222898.240945254 5932731.595410867 6841150.991908134 1.345476060246701 1.1787173569934464 0.9198761772763044 0.8609853731536864 1.3466446741260607 1.1809618604896037 0.9848620890621527 1.0558016113792343 0.8672124913524397 1.0 22.705807641602288 -4.493471136888729 4.167846053103548 1.0383075047226569 1.3234265394721105 0.33720478125417064 0.14008680642423346 0.2634432516428171 10.082898422879442 0.038096489682262404 0.1528824668098568 3.210176144688764e-05 4.493471136888729 0.28511903474945366 VREELIDK ddPTM_KYSE-520_SHP099_60min_R1 2 VREELIDK 8 1 A0A0A0MSX9;P41252;J3KR24 A0A0A0MSX9 IARS Isoleucine--tRNA ligase, cytoplasmic 0 ; 73.84100000000001 0.020247 894300000.0 1083230.0 1224120.0 1245660.0 666690.0 1011660.0 1114760.0 726500.0 886860.0 1023580.0 988430.0 False True 1023141.0725345317 1165311.4377584192 1325957.2367264708 730052.0171523426 1091271.8864419889 1107802.3693407734 799941.7099567268 883783.6896546792 837723.6743519957 979673.2791869028 1.0443696835170453 1.1894898661782325 1.3534688195507103 0.7451994789102161 1.113914107515221 1.130787572628513 0.8165392758498553 0.902120848277286 0.8551051581679142 1.0 19.901941165412566 -5.849269754438378 0.7085865045989618 0.8991611512222033 1.1738079296553887 0.24886914290027495 0.15498111925576433 1.0713142162465805 1.1787578115129806 0.10081277944143752 0.16292625579675662 1.4149146574123531e-06 5.849269754438378 0.2746467784331854 VREEYPDR ddPTM_KYSE-520_SHP099_60min_R1 2 VREEYPDR 8 1 A0A0B4J269;Q13509;Q13509-2;G3V2A3 A0A0B4J269 TUBB3 Tubulin beta-3 chain 0 ; 94.69200000000001 0.0039725 277650000.0 352880.0 322940.0 236268.0 211800.0 342060.0 313480.0 234049.0 299300.0 286400.0 281940.0 False True 333305.04295116005 307425.4776571772 251498.2133221662 231929.40832000814 368978.17594483035 311523.4550404985 257708.9570181172 298261.798157145 234396.97955647032 279442.2309460005 1.1927511522607621 1.1001396482430181 0.9000007352888827 0.8299726477807366 1.3204094982198014 1.1148044946030273 0.9222262366918941 1.0673468972368074 0.838802992528947 1.0 18.092190540181896 -6.763075891885602 24.99902605008047 0.9627062686194987 1.069307140650019 0.14636564082852432 0.14020994521294647 108.07795825565995 1650930.306150756 0.06009135855220982 0.04293646236590205 1.7255363324401062e-07 6.763075891885602 0.10660087203052027 VREYELR ddPTM_KYSE-520_SHP099_60min_R1 6 VREYELR 7 1 Q5VVC8;P62913-2;P62913 Q5VVC8 RPL11 60S ribosomal protein L11 0 ;;;;; 172.11 0.00060603 8155400000.0 8535690.0 7751690.0 5496670.0 4658940.0 7601620.0 6905440.0 5323880.0 5849650.0 6146580.0 6131100.0 False True 8062198.260223846 7379287.176876093 5850994.14318295 5101724.256838609 8199824.246698646 6862340.587517098 5862069.7464617 5829358.929468579 5030516.014672514 6076783.2239236245 1.3267213858285847 1.2143410263220604 0.9628439797141738 0.8395435658711149 1.3493692212710244 1.1292719082854266 0.9646665892874668 0.9592836727364301 0.8278254841916901 1.0 22.53487639710504 -4.61218423960503 4.100921300646367 1.012670670322896 1.3046936935722209 0.3707415954917255 0.1415035202206979 0.23689801175429967 7.229190737781847 0.03924118988949179 0.12001129255703896 2.4423942024211295e-05 4.61218423960503 0.29202302324932483 VRGEVAPDAK ddPTM_KYSE-520_SHP099_60min_R1 8 VRGEVAPDAK 10 1 P09382;F8WEI7 P09382 LGALS1 Galectin-1 0 ;;;;;;; 140.09 0.00026836 13881130000.0 23423900.0 22880880.0 14872620.0 14053170.0 21290650.0 22287470.0 15362340.0 19699570.0 20036060.0 18914690.0 False True 22124529.572612993 21781648.17989892 15831332.88223337 15388779.05156037 22966103.027772333 22148365.63261277 16915315.24919013 19631236.789584205 16398016.57197002 18747120.562006146 1.1801561471499615 1.1618663307709614 0.8444674386059021 0.8208609423864293 1.2250469586415627 1.1814275989401677 0.9022887111246063 1.0471601078498345 0.8746952108049628 1.0 24.160165688090803 -4.627676921416357 10.46501858066629 0.995234162509602 1.1754860301619683 0.24408914418015504 0.12904837604720548 0.47903640730007474 43.43275992516109 0.03506687039108629 0.09292761654492848 2.3568018943921683e-05 4.627676921416357 0.18025186765236634 VRGGAPDPSPGATATPGAPAQPS(ph)SPDAR ddPTM_KYSE-520_SHP099_60min_R1 2 VRGGAPDPSPGATATPGAPAQPSSPDAR 28 1 O95365 O95365 ZBTB7A Zinc finger and BTB domain-containing protein 7A 1 VRGGAPDPSPGATATPGAPAQPS(0.5)S(0.5)PDAR;VRGGAPDPSPGATATPGAPAQPS(0.608)S(0.392)PDAR 185.81 2.0201000000000002e-15 2913400000.0 1035710.0 1182880.0 1070000.0 612600.0 686130.0 761930.0 541530.0 806170.0 1395160.0 805070.0 True False 978257.1016633023 1126052.6692609233 1138973.9120605323 670821.3198150934 740124.5274543242 757174.5122464172 596273.1372234913 803373.5844314917 1141834.1131215247 797937.706134983 1.2259817954984766 1.4112037325761302 1.4273970302486971 0.8406938469725781 0.9275467517875652 0.9489143155221818 0.747267778723848 1.0068124093581676 1.4309815219189135 1.0 19.60591659612491 -5.25553233023156 24.77738401982488 0.9723829615561124 1.3604951637002678 0.47998641366107164 0.17549409453832757 366.87724733572094 1538877.410134585 0.04975549182616998 0.08333321750138603 5.5522328303355045e-06 5.25553233023156 0.3881122021441554 VRGGDSGLDGLGGPGVQLGS(ph)PDKK ddPTM_KYSE-520_SHP099_60min_R1 1 VRGGDSGLDGLGGPGVQLGSPDKK 24 2 Q9Y3Y4-2 Q9Y3Y4-2 1 VRGGDSGLDGLGGPGVQLGS(1)PDKK 173.95 8.9729e-11 156900000.0 154050.0 150440.0 156220.0 130390.0 132980.0 142470.0 119900.0 121610.0 167120.0 127100.0 True False 145504.5394089385 143212.63658495634 166290.19116083777 142782.2263968169 143444.76944730023 141580.79188343688 132020.6621112342 121188.16329398743 136775.2207523648 125973.99288230357 1.1550363378962047 1.1368428777101531 1.32003588483697 1.1334262186181328 1.1386855823592053 1.123889055542715 1.0479993456631957 0.9620093840100193 1.0857417282958772 1.0 16.942766396951946 -6.496889443464371 1.2127158501240745 1.0125375761605582 1.1910257924744496 0.6162866923196181 0.05773185374716181 0.3106480563666761 0.9338451305110953 0.03308486051701551 0.02413706905397965 3.185008212796647e-07 6.496889443464371 0.17848821631389145 VRHDS(ph)PDPS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 VRHDSPDPSPPR 12 1 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 2 VRHDS(1)PDPS(1)PPR;VRHDS(1)PDPS(1)PPR 59.261 0.027821 1534020000.0 828700.0 790750.0 785830.0 762280.0 699670.0 740280.0 697920.0 704830.0 946720.0 728840.0 True False 782730.359027507 752761.1830600512 836485.8591724557 834726.8620121611 754730.0484222624 735659.6379270767 768472.5646428067 702385.1092385581 774819.5128690699 722383.0446289392 1.0835392176591934 1.0420526736569737 1.1579533398408137 1.1555183475283928 1.04477818801788 1.018378882778121 1.0638020512199893 0.9723167154336335 1.072588176909752 1.0 19.46240450552134 -5.9209566294472475 6.97686171142132 1.0266694091443904 1.108107445508762 0.48697997227703027 0.041150761323955745 0.2040253133453213 14.919151238463076 0.013199684033271786 0.014993331211692397 1.1996190963949255e-06 5.9209566294472475 0.08143803636437164 VRHDS(ph)PDPS(ph)PPRR ddPTM_KYSE-520_SHP099_60min_R1 1 VRHDSPDPSPPRR 13 2 Q9BRD0 Q9BRD0 BUD13 BUD13 homolog 2 VRHDS(1)PDPS(1)PPRR 73.809 0.045639 0.0 174300.0 153360.0 164270.0 167130.0 159050.0 150930.0 141130.0 150920.0 199060.0 114780.0 True False 164631.23154156437 145992.35540194696 174859.10704129317 183013.98495053322 171566.33012929093 149987.9898853593 155396.79769606734 150396.4937449927 162915.72189424236 113763.13849748863 1.4471403805829308 1.2833010527849475 1.5370453852690893 1.6087283400200263 1.5081012390764723 1.3184234530297383 1.3659679202635377 1.322014280999401 1.4320607188403016 1.0 16.795673646126893 -9.913574775715034 0.3409014555399496 0.8040073986472838 1.4658828923396348 0.6478842387169464 0.09598634926655494 8.99259308098117 0.8527686872436556 1.861744847152568 0.0928505644866551 1.2201837145405203e-10 9.913574775715034 0.661875493692351 VRLQS(ph)ASPS(ph)TR ddPTM_KYSE-520_SHP099_60min_R1 4 VRLQSASPSTR 11 1 A2A2Y8;A0A3B3ITM2;Q9UMD9-2;Q9UMD9 A2A2Y8 COL17A1 Collagen alpha-1(XVII) chain;120 kDa linear IgA disease antigen;97 kDa linear IgA disease antigen 2 VRLQS(0.923)AS(0.107)PS(0.78)T(0.19)R;VRLQS(0.958)AS(0.116)PS(0.869)T(0.058)R;VRLQS(0.977)AS(0.299)PS(0.604)T(0.121)R;VRLQS(0.984)AS(0.266)PS(0.695)T(0.055)R 90.853 0.0094255 2723510000.0 4662800.0 5053800.0 4484490.0 4883410.0 4779920.0 5133470.0 4264310.0 4819910.0 7136000.0 4513880.0 True False 4404145.188938648 4811007.862091547 4773567.400837698 5347527.818149244 5156072.509975482 5101430.109565991 4695388.070455021 4803190.857185449 5840282.28392099 4473890.534945499 0.9844105828110744 1.075352162622851 1.066983504301553 1.1952746220274673 1.1524807032495472 1.140267082915594 1.0495089304888905 1.0736049126968552 1.3054146582940784 1.0 22.09309852696768 -4.419184128642079 1.456665966825383 1.1300120674763054 0.9576010821718897 0.22580067356037825 0.08053009471661601 1.3070385140481038 3.214863162013618 0.022900822500250516 0.3010574843273133 3.809042964492505e-05 4.419184128642079 -0.1724109853044158 VRPAS(ph)TGGLSLLPPPPGGK ddPTM_KYSE-520_SHP099_60min_R1 3 VRPASTGGLSLLPPPPGGK 19 1 D6RB24;Q9NVZ3-4;Q9NVZ3;Q9NVZ3-2 D6RB24 NECAP2 Adaptin ear-binding coat-associated protein 2 1 VRPAS(0.458)T(0.458)GGLS(0.083)LLPPPPGGK;VRPAS(0.48)T(0.48)GGLS(0.04)LLPPPPGGK;VRPAS(0.869)T(0.065)GGLS(0.065)LLPPPPGGK 131.56 1.3817e-05 1042710000.0 1292290.0 1618600.0 1340350.0 1161370.0 1209290.0 1538360.0 1170110.0 1628090.0 1828660.0 1769480.0 True False 1220604.0975837535 1540840.026431868 1426751.1056358262 1271746.255621377 1304454.2430811068 1528758.5246143327 1288396.137973114 1622442.535789061 1496621.4407672323 1753803.783834609 0.6959752903001272 0.8785703626792812 0.8135180906704982 0.7251359971642688 0.7437857388065268 0.8716816206609924 0.7346295804859634 0.9250992333028655 0.853357402100559 1.0 20.742055916922265 -7.91116486997748 0.7654558160539978 0.9969951664388094 0.7803944203202782 0.5185283966497125 0.06509398677765187 0.5298141242664818 0.7126798818405456 0.06126942103088317 0.023668447839312275 1.2269733503344057e-08 7.91116486997748 -0.2166007461185312 VRPAST(ph)GGLSLLPPPPGGK ddPTM_KYSE-520_SHP099_60min_R1 1 VRPASTGGLSLLPPPPGGK 19 1 D6RB24;Q9NVZ3-4;Q9NVZ3;Q9NVZ3-2 D6RB24 NECAP2 Adaptin ear-binding coat-associated protein 2 1 VRPAS(0.363)T(0.575)GGLS(0.062)LLPPPPGGK 109.72 0.00016411 704440000.0 398290.0 488750.0 418060.0 375170.0 354650.0 491410.0 374220.0 563310.0 618480.0 674200.0 True False 376196.0597285693 465269.7163712935 445008.81651965063 410826.04400102684 382558.93731752946 488342.927910716 412049.8096352469 561356.009087543 506179.6226120306 668227.1125196631 0.5629763484304888 0.6962748258102183 0.6659544459991601 0.6148000227825805 0.5724983768991749 0.7308038221755723 0.6166313846224281 0.8400676934086907 0.7574963857772771 1.0 19.3499789939312 -7.978005176746178 0.6626615398198741 0.9992356798937256 0.6271939840116527 0.7699412510060235 0.06141649193217562 0.3503706530351576 0.3601822614836551 0.05902528525440723 0.024446381152907613 1.05194933461911e-08 7.978005176746178 -0.3720416958820729 VRPSSDLNNSTGQS(ph)PHHK ddPTM_KYSE-520_SHP099_60min_R1 2 VRPSSDLNNSTGQSPHHK 18 1 P27448-8;P27448-3;P27448-2;J3KNR0;P27448-4;P27448 P27448-8 MARK3 MAP/microtubule affinity-regulating kinase 3 1 VRPSSDLNNS(0.002)T(0.013)GQS(0.986)PHHK;VRPSSDLNNS(0.002)T(0.006)GQS(0.992)PHHK 168.75 1.2072e-08 1698380000.0 523880.0 641390.0 637310.0 1170210.0 539490.0 540230.0 564820.0 437390.0 613170.0 400100.0 True False 494819.3320711109 610576.6616539825 678392.0223320532 1281426.4065635353 581944.7937217929 536858.2241818563 621917.5177119881 435872.79617759393 501833.78475782473 396555.4252730894 1.2477936261503715 1.5397006893387137 1.7107117419081481 3.231392952652397 1.467499261474066 1.3538037559621 1.5682991029153168 1.0991472273451524 1.2654820808774334 1.0 18.59716299529259 -5.982046345948798 24.99057003443314 1.297163252155436 1.946131232820945 0.2827343257834949 0.5065001542099995 349.198795235461 486064.38944095094 0.1658697652994361 0.18804649535764678 1.0422062039120795e-06 5.982046345948798 0.6489679806655091 VRQS(ph)PLATR ddPTM_KYSE-520_SHP099_60min_R1 3 VRQSPLATR 9 1 K7EK59;O75381-2;O75381 K7EK59 PEX14 Peroxisomal membrane protein PEX14 1 VRQS(1)PLATR;VRQS(1)PLATR;VRQS(1)PLATR 131.06 0.00036785 2167600000.0 403063.0 531520.0 395360.0 471020.0 321030.0 488270.0 352671.0 433310.0 445450.0 386080.0 True False 380704.2919038296 505984.9813722147 420845.5381983665 515785.5991826733 346293.23458916205 485222.5258154395 388322.4264172738 431806.9487453142 364567.50888069056 382659.631565695 0.99489013342258 1.3222847137073752 1.099790789209799 1.3478965551507966 0.9049641143808775 1.2680264281604436 1.0147985164476558 1.1284361169181276 0.9527200645362603 1.0 18.545702187275378 -7.186563282717268 0.7412167365241734 0.9842596951280262 1.1701022261437715 0.16371434801967255 0.13803240484179968 1.1399526353242215 1.1861846810008512 0.117714903233013 0.057517350192154475 6.507837757272845e-08 7.186563282717268 0.18584253101574522 VRRPS(ph)ES(ph)DKEDELDK ddPTM_KYSE-520_SHP099_60min_R1 2 VRRPSESDKEDELDK 15 3 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 2 VRRPS(1)ES(1)DKEDELDK;VRRPS(1)ES(1)DKEDELDK 127.17 0.00010867 1513030000.0 1679320.0 1523550.0 1435430.0 1492240.0 1484650.0 1486860.0 1506390.0 1614330.0 1723100.0 1523350.0 True False 1586164.7719585756 1450356.3711048288 1527960.1145692056 1634062.040941683 1601483.5084970258 1477579.9552172888 1658670.602149642 1608730.2660174547 1410228.475816179 1509854.3041483678 1.0505416102736156 0.9605935931168545 1.0119917599804773 1.082264716835294 1.0606874478530175 0.9786241964920692 1.0985633498493181 1.065487088123286 0.9340162636497681 1.0 20.52597791038192 -5.013910513457422 24.69540319001578 1.0367902987358726 1.0007488701456715 0.03448041270989144 0.05164252033400515 1414.3888760924235 2510985.5546063515 0.013626272911454454 0.02503694250656442 9.684773908368563e-06 5.013910513457422 -0.0360414285902011 VRRPS(ph)ESDKEDELDK ddPTM_KYSE-520_SHP099_60min_R1 7 VRRPSESDKEDELDK 15 3 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VRRPS(0.975)ES(0.025)DKEDELDK;VRRPS(0.797)ES(0.203)DKEDELDK;VRRPS(0.982)ES(0.018)DKEDELDK;VRRPS(0.969)ES(0.031)DKEDELDK;VRRPS(0.962)ES(0.038)DKEDELDK;VRRPS(0.796)ES(0.204)DKEDELDK;VRRPS(0.962)ES(0.038)DKEDELDK 204.31 1.1786999999999999e-11 15374590000.0 10389340.0 9297070.0 9168200.0 9700980.0 9708780.0 9497870.0 9713010.0 9999180.0 11044940.0 8573370.0 True False 9813022.599564163 8850424.80201342 9759196.841638664 10622958.22249402 10472805.750598282 9438590.270274023 10694895.840642538 9964495.178406153 9039457.316279469 8497416.611780934 1.1548242304560252 1.0415430014038702 1.1484898631553948 1.2501397433857964 1.2324693761723582 1.1107599758246798 1.2586055655803658 1.1726499515854314 1.0637888818758212 1.0 23.01859286847295 -7.906458607998321 3.3417249954422354 1.0020824278825913 1.1718234186799747 0.45752833890358946 0.06247582916339767 0.2103370002968376 4.525118019777014 0.06439103241441506 0.017215382042722965 1.2403418347368777e-08 7.906458607998321 0.16974099079738347 VRRPSES(ph)DKEDELDK ddPTM_KYSE-520_SHP099_60min_R1 1 VRRPSESDKEDELDK 15 3 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VRRPS(0.018)ES(0.982)DKEDELDK 127.17 9.0804e-05 1037200000.0 1002100.0 974310.0 849380.0 929570.0 1072900.0 960420.0 1106600.0 926380.0 1165700.0 917130.0 True False 946511.515363175 927502.6851308744 904132.3938560499 1017916.0533145884 1157331.1260340533 954425.6625302898 1218465.927375245 923166.6039987172 954038.2649056477 909004.9417163422 1.0412611328339034 1.020349442082906 0.9946396904607666 1.1198135528203017 1.273184636212024 1.0499675180293149 1.3404392775627736 1.0155793017534487 1.0495413403410938 1.0 19.793928611947813 -5.316996058740165 6.389934210651983 1.1349024635707916 1.0190385330798926 0.15967578806799398 0.10466407619215055 0.36046065099608343 32.79383577257867 0.029216272746956075 0.043916901399429734 4.8195217136275325e-06 5.316996058740165 -0.11586393049089905 VRSS(ph)FGR ddPTM_KYSE-520_SHP099_60min_R1 2 VRSSFGR 7 1 Q86W92-4;Q86W92;Q86W92-3;F5GZP6;H0YGH8;A0A087WVX8;Q86W92-2 Q86W92-4;Q86W92-2 PPFIBP1 Liprin-beta-1 1 VRS(0.012)S(0.988)FGR;VRS(0.036)S(0.964)FGR 79.16 0.010657 3119800000.0 3893410.0 3722000.0 3921030.0 3679280.0 3815930.0 3433140.0 3106850.0 3725230.0 4369610.0 3765070.0 True False 3677434.7859795857 3543189.533164104 4173785.867669815 4028957.6649841364 4116221.9813282946 3411712.4998013806 3420920.717934014 3712308.046605219 3576198.972904147 3731714.4089801377 0.9854545077538808 0.9494803580460605 1.118463368371883 1.0796532701668438 1.1030377810860508 0.9142480173700612 0.9167155744024199 0.9947996121224555 0.9583260080938262 1.0 21.831407149159663 -6.267346307026855 24.993180131974448 0.9539864263263758 1.047548047666378 0.40966720676199353 0.054204960855928006 535.968268159387 2267763.2567719603 0.02056806273686427 0.01860907335709127 5.403232965660439e-07 6.267346307026855 0.09356162134000234 VRT(ph)PVMNSEAK ddPTM_KYSE-520_SHP099_60min_R1 1 VRTPVMNSEAK 11 1 Q15061 Q15061 WDR43 WD repeat-containing protein 43 1 VRT(1)PVMNSEAK 104.41 0.0027616999999999997 716770000.0 881740.0 929840.0 779780.0 798270.0 661480.0 1107300.0 806160.0 949240.0 1168900.0 994830.0 True False 832828.1244948878 885169.0906817064 830045.8664921134 874137.3407913728 713534.712693639 1100388.9299679212 887654.5201634077 945947.3079942821 956657.2255710817 986016.5801660283 0.8446390671794319 0.8977223187592435 0.8418173519479235 0.8865341195826373 0.7236538685520805 1.115994347460805 0.9002429959280622 0.9593624762729657 0.970224278997415 1.0 19.911252380595975 -6.257949152374395 24.99807746401027 0.9810673580216368 0.84495411485522 0.554689722298528 0.06702393462026399 258.7676265591885 1853378.0959424947 0.021972691456557697 0.021138829095360565 5.521420808350715e-07 6.257949152374395 -0.13611324316641682 VRTELADK ddPTM_KYSE-520_SHP099_60min_R1 3 VRTELADK 8 1 P35579 P35579 MYH9 Myosin-9 0 ;; 134.51 0.00081484 3490230000.0 5502800.0 5314070.0 3656070.0 3179000.0 5327590.0 5286990.0 3524820.0 4463730.0 4415090.0 4587600.0 False True 5197548.714440165 5058774.10061831 3891746.122118826 3481131.2041987986 5746841.023159443 5253991.9343006415 3881143.2045281115 4448246.362472419 3613420.951361651 4546957.433098789 1.1430827736819151 1.1125624497370132 0.8559011557463754 0.765595731963204 1.2638871394146576 1.1554961777418713 0.8535692848752007 0.9782907423087315 0.794689856794871 1.0 22.116470067502792 -6.779228595312146 24.998812084103314 0.9048283566564037 1.0403419683891482 0.18193799151626522 0.14755362206556194 511.5470912459507 718859.8336012706 0.06656020904823372 0.0449802374189405 1.6625373266125605e-07 6.779228595312146 0.13551361173274445 VRVDLPDKYPFK ddPTM_KYSE-520_SHP099_60min_R1 1 VRVDLPDKYPFK 12 2 H7C4M9;C9JZG9;C9JZY6;C9J8Q9;P62256-2;P62256 H7C4M9 UBE2H Ubiquitin-conjugating enzyme E2 H 0 117.93 9.258e-05 447350000.0 557280.0 476590.0 400810.0 327140.0 564160.0 444770.0 357320.0 361070.0 375630.0 333370.0 False True 526366.5674898622 453693.9010238253 426646.8539186742 358231.2872417727 608556.1823686934 441994.0254509451 393441.39270714065 359817.5324443712 307425.06086172117 330416.60115793534 1.593039107736191 1.3730965678899554 1.2912391581521714 1.084180655531113 1.841784523646893 1.3376871013804692 1.19074341703273 1.088981398584094 0.9304165098979864 1.0 18.333926648502114 -7.032379287268931 1.952932503560451 0.9919081348140241 1.4167919287759456 0.501696948415028 0.18791570360673324 0.31697192795449347 2.365633979464097 0.1187696217125796 0.05960689099120894 9.281554363201261e-08 7.032379287268931 0.42488379396192155 VRVDS(ph)TAK ddPTM_KYSE-520_SHP099_60min_R1 10 VRVDSTAK 8 1 P78371-2;P78371;F8VQ14;F5GWF6 P78371-2 CCT2 T-complex protein 1 subunit beta 1 VRVDS(0.622)T(0.378)AK;VRVDS(0.5)T(0.5)AK;VRVDS(0.945)T(0.055)AK;VRVDS(0.992)T(0.008)AK;VRVDS(0.581)T(0.419)AK;VRVDS(0.889)T(0.111)AK;VRVDS(0.951)T(0.049)AK;VRVDS(0.989)T(0.011)AK;VRVDS(0.884)T(0.116)AK;VRVDS(0.949)T(0.051)AK 106.0 0.0011113 35364420000.0 23535840.0 21802970.0 20994010.0 22870920.0 20791180.0 24122100.0 24460320.0 29452810.0 30437390.0 30248050.0 True False 22230260.037666127 20755522.594274826 22347317.47620365 25044565.360407136 22427327.580367886 23971545.02626132 26933007.85531833 29350645.076447506 24910727.240161713 29980075.809626836 0.7415011282435723 0.6923105440450577 0.7454056360000181 0.8353736501348382 0.7480744119121372 0.7995825353638322 0.8983635674019854 0.9790050319693583 0.8309094145840247 1.0 24.83750069559719 -6.627643994915069 0.40420299235234947 0.9927875734500424 0.692156102573876 0.7290687618015185 0.051344237325915254 0.6596508949780944 0.24559419192046536 0.05672571704384847 0.07160067511395012 2.3569805846257038e-07 6.627643994915069 -0.3006314708761664 VRVELSNGEK ddPTM_KYSE-520_SHP099_60min_R1 1 VRVELSNGEK 10 1 P84103;P84103-2 P84103 SRSF3 Serine/arginine-rich splicing factor 3 0 138.45 0.00024639999999999997 0.0 125860.0 128610.0 74016.0 76674.0 106440.0 110780.0 80053.0 97504.0 101170.0 100340.0 False True 118878.29490431023 122431.3825524544 78787.18978978724 83961.07390712123 114816.22243924381 110088.58092824554 88145.53848199024 97165.78138160465 82800.07828815667 99451.0656633388 1.195344606027012 1.2310716002471853 0.7922206691730906 0.8442450902572105 1.1544996694949359 1.1069623054710827 0.8863207034943198 0.97702101765837 0.8325710512590286 1.0 16.601699209823924 -4.739273602406634 24.999885836343267 0.9553775073301749 1.21320838917723 0.4716770568983899 0.11160031410366267 222.94818639473203 251450.3963835365 0.030386829083405446 0.08025866173956209 1.8227470229852777e-05 4.739273602406634 0.25783088184705516 VRVS(ph)GQGLHEGHTFEPAEFIIDTR ddPTM_KYSE-520_SHP099_60min_R1 4 VRVSGQGLHEGHTFEPAEFIIDTR 24 1 Q60FE5;P21333-2;P21333;H0Y5C6 Q60FE5 FLNA Filamin-A 1 VRVS(1)GQGLHEGHTFEPAEFIIDTR;VRVS(1)GQGLHEGHTFEPAEFIIDTR;VRVS(1)GQGLHEGHTFEPAEFIIDTR;VRVS(1)GQGLHEGHTFEPAEFIIDTR 213.84 3.6608e-21 4143080000.0 657212.0 692749.0 718411.0 717220.0 544395.0 623946.0 600340.0 593373.0 793510.0 656126.0 True False 620755.1402403594 659468.2982025516 764720.9225582422 785384.3731599449 587235.7893161608 620051.7215729837 661028.2259537802 591314.7275572999 649428.5867592688 650313.2340983044 0.9545479127471103 1.0140779298716582 1.1759270493988492 1.2077016612600913 0.9030045192458617 0.9534662514330037 1.0164766627736443 0.9092767862508453 0.9986396596399237 1.0 19.31077525785472 -5.779306598958777 24.999577492224862 0.9610905685164718 1.0890549493389694 0.3931342220836349 0.075793035458624 265.7750646030144 371867.28985693876 0.02529084849027507 0.02873516074007477 1.6622387450418413e-06 5.779306598958777 0.12796438082249761 VRVS(ph)PQDANPLMANGTLTR ddPTM_KYSE-520_SHP099_60min_R1 5 VRVSPQDANPLMANGTLTR 19 1 O60716-5;O60716-3;A0A669KB05;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-6;O60716-4 O60716-5 CTNND1 Catenin delta-1 1 VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR;VRVS(1)PQDANPLMANGTLTR 136.88 2.333e-06 4287440000.0 2009890.0 2096860.0 1882220.0 1659997.0 1827300.0 1928120.0 1768050.0 2009650.0 2442250.0 1805100.0 True False 1898397.39508362 1996123.698148971 2003550.912858478 1817762.6157837037 1971098.1140852142 1916085.8878801991 1946781.7485051511 2002678.9932058381 1998798.9641123912 1789108.2183465497 1.0610858390880753 1.1157087523714693 1.1198601025432162 1.0160160224760668 1.1017210104299087 1.0709726042458176 1.0881296774234928 1.1193727537938791 1.1172040593271841 1.0 20.770809224098 -10.99292570071631 12.543114925839713 0.9265838538356139 1.0900586290701106 0.4224549865510816 0.03157211970444614 0.021721077004735547 1.2250652058289998e-05 0.010243976779549007 0.007478316591983909 1.0164225679998831e-11 10.99292570071631 0.16347477523449672 VRVSTETS(ph)S(ph)PLSPPAVPPPPVPVLPGAVPSQTER ddPTM_KYSE-520_SHP099_60min_R1 2 VRVSTETSSPLSPPAVPPPPVPVLPGAVPSQTER 34 1 Q13671;Q13671-2;E9PNR2 Q13671 RIN1 Ras and Rab interactor 1 2 VRVS(0.278)T(0.315)ET(0.361)S(0.382)S(0.383)PLS(0.282)PPAVPPPPVPVLPGAVPSQTER;VRVS(0.274)T(0.312)ET(0.362)S(0.386)S(0.403)PLS(0.262)PPAVPPPPVPVLPGAVPSQTER 77.934 0.006509 483760000.0 226510.0 260000.0 234610.0 208328.0 230990.0 218130.0 168795.0 170281.0 313900.0 190361.0 True False 213945.0387635098 247509.20973204356 249733.33598927257 228127.4304839031 249167.59884668293 216768.56975878502 185858.44588044836 169690.33495488405 256903.67277505572 188674.54963861709 1.1339369256388592 1.311831459018278 1.3236196215525946 1.2091054724702042 1.3206211400739147 1.1489020123486637 0.9850742786265417 0.8993811580836156 1.361623352312875 1.0 17.52554030497223 -6.5019412215151124 4.871848255061572 1.0536365844685034 1.2621616803047597 0.3599669546805573 0.12464026252279971 0.2022265936604529 12.908972908339035 0.04537279067205157 0.03762060372366879 3.1481743669422066e-07 6.5019412215151124 0.20852509583625634 VRYDS(ph)SNQVK ddPTM_KYSE-520_SHP099_60min_R1 4 VRYDSSNQVK 10 1 A0A087WZ12;A0A087WT34;A0A087X1H1;A0A0A0MTS6;K7EIE8;O95983-2;O95983 A0A087WZ12 MBD3 Methyl-CpG-binding domain protein 3 1 VRYDS(0.698)S(0.302)NQVK;VRYDS(0.922)S(0.078)NQVK;VRYDS(0.705)S(0.295)NQVK;VRYDS(0.784)S(0.216)NQVK 196.78 3.1762e-06 4707920000.0 2989360.0 3001830.0 3109240.0 3042570.0 3122930.0 3160300.0 3183520.0 3665580.0 4302930.0 3310640.0 True False 2823534.2416585833 2857617.580961309 3309666.585359899 3331734.9380179765 3368686.823958916 3140575.3954462344 3505341.269761106 3652864.9585328065 3521626.3800381385 3281310.305238944 0.8604898589293811 0.8708769714338913 1.0086417551170583 1.0153672247024381 1.0266285448774737 0.9571101490864756 1.0682748486677636 1.1132336227697326 1.073237838681549 1.0 21.64584060166296 -3.9834476847247102 0.5529264398036033 1.0582061692714542 0.6232234402070821 0.6944814607623879 0.04346589544893407 2.9932599645609463 0.5603705053307939 0.025010569440371003 0.8946127813831626 0.0001038848734991839 3.9834476847247102 -0.4349827290643721 VS(ph)DES(ph)LSKVQEAESPVFK ddPTM_KYSE-520_SHP099_60min_R1 7 VSDESLSKVQEAESPVFK 18 1 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 2 VS(0.989)DES(0.84)LS(0.161)KVQEAES(0.01)PVFK;VS(0.99)DES(0.909)LS(0.1)KVQEAESPVFK;VS(1)DES(0.873)LS(0.127)KVQEAESPVFK;VS(1)DES(0.991)LS(0.009)KVQEAESPVFK;VS(1)DES(0.999)LS(0.001)KVQEAESPVFK;VS(1)DES(0.917)LS(0.083)KVQEAESPVFK;VS(1)DES(0.946)LS(0.054)KVQEAESPVFK 273.88 2.119e-30 2053304000.0 3810630.0 3993900.0 3071640.0 4341450.0 4033230.0 3911280.0 3533000.0 4446300.0 5325770.0 3395010.0 True False 3599246.7575974283 3802027.0490338835 3269642.8291977695 4754060.102695465 4350622.255060415 3886868.2507043504 3890150.118757222 4430876.82307422 4358744.41973625 3364932.85267781 1.0696340507160942 1.1298968554478686 0.9716814487385064 1.4128246567868923 1.2929298876196575 1.1551101971057713 1.1560855116801052 1.3167801608724918 1.295343654857055 1.0 21.682146285430115 -5.2450370316197015 24.999680790775063 1.2420053408856397 1.0643533971903494 0.3358578530159101 0.11252569370400578 950.1335219648422 1448147.024521694 0.03013986427840668 0.052018360427323315 5.688044277009486e-06 5.2450370316197015 -0.17765194369529036 VS(ph)DESLSK ddPTM_KYSE-520_SHP099_60min_R1 2 VSDESLSK 8 0 Q08357 Q08357 SLC20A2 Sodium-dependent phosphate transporter 2 1 VS(1)DESLSK;VS(1)DESLSK 152.67 0.00036458 615420000.0 925710.0 982370.0 756330.0 899690.0 999330.0 943630.0 915180.0 937270.0 1170130.0 789280.0 True False 874359.0209428662 935175.4706325672 805084.2419707864 985196.2670983378 1077971.5855900934 937740.4551482243 1007695.3256960738 934018.8291304614 957663.8885768596 782287.5932505473 1.1176951142862248 1.195436919492412 1.0291410076254883 1.2593786167624978 1.3779735162498554 1.1987157450008148 1.2881392142612365 1.1939583820439275 1.2241839150197844 1.0 19.577339559054117 -5.286521310398626 24.86804859855146 1.2369097996947624 1.1222255855757977 0.1825240407926486 0.09831849056788323 1010.8208781418696 1002198.6771933328 0.02649266406909584 0.039311327119628064 5.16985889362442e-06 5.286521310398626 -0.11468421411896479 VS(ph)DFGGR ddPTM_KYSE-520_SHP099_60min_R1 2 VSDFGGR 7 0 P27694;I3L4R8 P27694 RPA1 Replication protein A 70 kDa DNA-binding subunit;Replication protein A 70 kDa DNA-binding subunit, N-terminally processed 1 VS(1)DFGGR;VS(1)DFGGR 118.5 0.0026079999999999996 652910000.0 848300.0 841620.0 748310.0 647190.0 807600.0 771190.0 675090.0 756240.0 849510.0 786130.0 True False 801243.1079558758 801187.3119026256 796547.2599383331 708698.7430152316 871153.5253845653 766376.7171515942 743334.6854434783 753616.7799477425 695260.3984043899 779165.4997998851 1.0283349406020428 1.0282633305868862 1.0223081747625018 0.9095612462272115 1.1180596748807612 0.9835865645340105 0.954013859230665 0.9672101500147217 0.8923141471009115 1.0 19.571570273046056 -6.5196896389357635 21.295418414809927 0.9532444993133291 1.0190680282668687 0.26803833029725177 0.052977566188366056 27.268069350433127 182104.66182346162 0.019505369712221925 0.015498132129105169 3.022110648163275e-07 6.5196896389357635 0.0658235289535396 VS(ph)EGGPAEIAGLQIGDK ddPTM_KYSE-520_SHP099_60min_R1 9 VSEGGPAEIAGLQIGDK 17 0 O14907 O14907 TAX1BP3 Tax1-binding protein 3 1 VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK;VS(1)EGGPAEIAGLQIGDK 300.25 5.0994e-38 2845806000.0 3592727.0 3230622.0 3087592.0 2770671.0 2999021.0 3160352.0 2921208.0 3236451.0 3827162.0 3501526.0 True False 3393431.271386286 3075418.069857514 3286623.1206418737 3033994.7388073914 3235026.8906046897 3140627.0708949515 3216512.212882689 3225224.506874339 3132245.855702862 3470505.2037860095 0.9777917254480291 0.8861586107125006 0.9470157592780621 0.8742227890906418 0.9321486932437288 0.904948094435591 0.9268138279619241 0.9293242100187341 0.9025331102474254 1.0 21.726714261506437 -10.73265544275285 2.7016808314701666 1.015357538969255 0.918926542323801 0.41334598025175207 0.02852291122410526 31565569.859814536 24336220.09673402 3247342.2694992996 0.006673192161007828 1.8507363597808882e-11 10.73265544275285 -0.09643099664545407 VS(ph)FRDPLVSEGGPR ddPTM_KYSE-520_SHP099_60min_R1 1 VSFRDPLVSEGGPR 14 1 H0Y413;O43900-2;O43900 H0Y413 PRICKLE3 Prickle-like protein 3 1 VS(1)FRDPLVSEGGPR 115.57 0.00062908 0.0 56981.0 66563.0 64764.0 64070.0 71114.0 57107.0 64308.0 79066.0 75556.0 66308.0 True False 53820.15034119262 63365.21356690014 68938.79106606373 70159.19353665216 76710.26721668895 56750.574030233955 70808.88022559843 78791.73850014308 61836.935011762056 65720.56270684341 0.8189240646229036 0.9641611537860736 1.0489683628178248 1.0675379310065853 1.1672186612105986 0.863513209455898 1.0774235233111475 1.1988901989717533 0.9409069622181284 1.0 16.004057212407385 -4.356845062273816 2.04612150723508 1.053002990812573 0.7784641262679552 0.3563603603383845 0.09303918282575534 0.6129961549998962 3.301540982014565 0.024791699422584048 0.2907851553209927 4.396984530920192e-05 4.356845062273816 -0.27453886454461784 VS(ph)HS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 2 VSHSPPPK 8 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 VS(1)HS(1)PPPK;VS(1)HS(1)PPPK 96.015 0.0035746000000000003 491050000.0 1342300.0 1264010.0 1177660.0 1233810.0 1316410.0 1216420.0 1129500.0 1328440.0 1530860.0 1317890.0 True False 1267839.9431912908 1203285.0622823099 1253573.847922623 1351070.931441498 1420003.9776516794 1208827.8715719124 1243680.8828577064 1323831.9517002283 1252894.4138401453 1306214.519902906 0.9706215356460227 0.921200188749818 0.9596998263469037 1.0343407693415676 1.0871139127723306 0.9254436029862595 0.9521260588575851 1.013487395469032 0.959179671294173 1.0 20.31696041979593 -5.016349880087681 22.95231034684715 0.9956648469761751 0.9445456361710066 0.18554549824438393 0.04424700562502204 405.321465072367 569006.2139072412 0.012683003294447336 0.022834400714742294 9.630528480221256e-06 5.016349880087681 -0.05111921080516846 VS(ph)HSPPPK ddPTM_KYSE-520_SHP099_60min_R1 3 VSHSPPPK 8 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 VS(0.626)HS(0.374)PPPK;VS(0.772)HS(0.228)PPPK;VS(0.692)HS(0.308)PPPK 101.65 0.0043765 4201550000.0 4391600.0 4132200.0 4017500.0 3647800.0 3884100.0 3861200.0 3604800.0 3661500.0 4499600.0 3736900.0 True False 4147989.1935624443 3933682.9094413454 4276474.478227281 3994485.815248936 4189756.5724940444 3837100.818560581 3969208.363457692 3648799.111100527 3682586.0656853835 3703793.973264206 1.1199297864580633 1.0620684999858496 1.1546199678213644 1.0784848844409505 1.131206703919752 1.035991971005582 1.0716601387953477 0.9851517491089788 0.9942740045121539 1.0 21.8205724189977 -6.869769284863593 1.1551764930315658 0.989001742689599 1.1074461898238246 0.7042715405491983 0.030802805088615028 0.25896452559855354 0.6724068068679149 0.020896576359274555 0.010798170437511212 1.349679697681786e-07 6.869769284863593 0.11844444713422564 VS(ph)LDVNHFAPDELTVK ddPTM_KYSE-520_SHP099_60min_R1 3 VSLDVNHFAPDELTVK 16 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 1 VS(1)LDVNHFAPDELTVK;VS(1)LDVNHFAPDELTVK;VS(1)LDVNHFAPDELTVK 278.07 5.2387e-24 240310000.0 471100.0 421570.0 387603.0 431563.0 507710.0 457280.0 393409.0 489680.0 544540.0 504700.0 True False 444967.14388543327 401317.14441052923 412588.50956672773 472578.61776585266 547663.8885252579 454425.9459005969 433178.62102183886 487981.4143721712 445665.2627363144 500228.75065065833 0.8895273278608135 0.8022672505099464 0.8247996722100938 0.9447250226044773 1.094826892322562 0.9084362810204637 0.8659610637301316 0.9755165286630232 0.8909229270741195 1.0 18.932228453245415 -5.280609637829025 7.920190641954237 0.953720366157623 0.8351295843398042 0.40881771473628115 0.06359418855310485 0.20345027485440628 69.75435570880032 0.018565117391584958 0.028465325669435795 5.240712822862538e-06 5.280609637829025 -0.11859078181781879 VS(ph)LEEIYSGCTK ddPTM_KYSE-520_SHP099_60min_R1 2 VSLEEIYSGCTK 12 0 M0R080;P25685-2;P25685;M0R1D6;M0QZD0;M0QYT3;M0QXK0;Q9UDY4 M0R080;Q9UDY4 DNAJB1;DNAJB4 DnaJ homolog subfamily B member 1;DnaJ homolog subfamily B member 4 1 VS(1)LEEIYSGCTK;VS(1)LEEIYSGCTK 289.31 1.2505e-29 620240000.0 455190.0 400810.0 356180.0 419960.0 432870.0 421280.0 459760.0 484010.0 473030.0 411340.0 True False 429939.7033012311 381554.4859719243 379139.93270814954 459872.8721344217 466934.40630660835 418650.6352541182 506237.0276251967 482331.08227878384 387139.6761159118 407695.8476176775 1.0545599269983565 0.9358802357235004 0.929957798009494 1.1279802696584587 1.145300863462516 1.0268700005174292 1.2417026824858113 1.1830659671841854 0.9495796397685107 1.0 18.637133737488703 -5.2668137985239145 24.4646793067289 1.1091849121188766 0.9697074091489024 0.2792539869412003 0.08875370133747679 366.44403758186536 1668078.3438156985 0.024646740229742132 0.037811119527658255 5.409862182272567e-06 5.2668137985239145 -0.1394775029699742 VS(ph)LERLDLDLTADSQPPVFK ddPTM_KYSE-520_SHP099_60min_R1 9 VSLERLDLDLTADSQPPVFK 20 1 Q13263-2;Q13263;M0R0K9 Q13263-2 TRIM28 Transcription intermediary factor 1-beta 1 VS(1)LERLDLDLTADSQPPVFK;VS(1)LERLDLDLTADSQPPVFK;VS(1)LERLDLDLTADSQPPVFK;VS(0.996)LERLDLDLT(0.003)ADS(0.001)QPPVFK;VS(1)LERLDLDLTADSQPPVFK;VS(1)LERLDLDLTADSQPPVFK;VS(1)LERLDLDLTADSQPPVFK;VS(1)LERLDLDLTADSQPPVFK;VS(1)LERLDLDLTADSQPPVFK 213.39 6.801e-19 1595865000.0 1456194.0 1831677.0 1793230.0 1287711.0 1513915.0 1464992.0 1268561.0 1549970.0 2647068.0 1513647.0 True False 1375416.0159692287 1743680.4875167725 1908824.4750694449 1410094.6662755704 1633051.4975019493 1455848.4415168103 1396799.5258422797 1544593.515835716 2166427.1783540053 1500237.2651795454 0.9167989943274883 1.162269814240411 1.2723483940661884 0.9399144382050882 1.088528818344283 0.9704121310055428 0.9310524130162261 1.0295661570910666 1.4440563693735016 1.0 20.516759252864464 VS(ph)LPFK ddPTM_KYSE-520_SHP099_60min_R1 1 VSLPFK 6 0 Q96PC5-2 Q96PC5-2 MIA2 Melanoma inhibitory activity protein 2 1 VS(1)LPFK 58.782 0.062803 74530000.0 181500.0 152310.0 169310.0 152680.0 151430.0 140460.0 143030.0 173330.0 207670.0 157990.0 True False 171431.83318872034 144992.79897802896 180223.99350557837 167190.66129508414 163346.67948116022 139583.33703900836 157488.86823828038 172728.758685526 169962.36293467938 156590.33151435992 1.0947791701494636 0.925937109755289 1.150926700024587 1.067694663381897 1.0431466483368466 0.8913917972401 1.0057381366731322 1.1030614535079781 1.0853950003873207 1.0 17.256635612309065 -11.416833299175194 2.1177145496477108 0.7098479825943933 1.038003191143612 0.023877387963258556 0.07645689873202217 4540920.040847174 610674.3826053502 6379433.044772664 0.01972172540442762 3.829717160567071e-12 11.416833299175194 0.32815520854921876 VS(ph)LSEIGFGK ddPTM_KYSE-520_SHP099_60min_R1 2 VSLSEIGFGK 10 0 E5RJM2;E5RGN0;A0A087WZU2;Q00536;Q00536-3;Q00536-2;H0YBX5 E5RJM2 CDK16 Cyclin-dependent kinase 16 1 VS(1)LSEIGFGK;VS(0.999)LS(0.001)EIGFGK 221.55 2.7442e-09 426830000.0 729120.0 632750.0 567710.0 596260.0 640560.0 606960.0 594390.0 621910.0 742780.0 632050.0 True False 688674.2601353156 602351.740222887 604305.4949681164 652928.3711278943 690968.4277121576 603171.7374996196 654476.741887377 619752.739364885 607909.8759600377 626450.5287274586 1.0993274465491398 0.9615312185089465 0.9646499879179182 1.0422664539117263 1.102989615342424 0.9628401762623996 1.044738110792004 0.9893083506910288 0.9704036441551364 1.0 19.25684105776266 -7.404177895534582 6.791628769827674 0.9835285501756273 1.0218278393913465 0.11246095754615548 0.04936370348188045 0.6028493050714482 30.96177843750093 0.027806986710049667 0.013147131900414076 3.942957577187296e-08 7.404177895534582 0.03829928921571912 VS(ph)PAAAQLADTLFSK ddPTM_KYSE-520_SHP099_60min_R1 4 VSPAAAQLADTLFSK 15 0 O14686-3;O14686 O14686-3 KMT2D Histone-lysine N-methyltransferase 2D 1 VS(1)PAAAQLADTLFSK;VS(1)PAAAQLADTLFSK;VS(1)PAAAQLADTLFSK;VS(1)PAAAQLADTLFSK 241.32 8.8918e-19 2134708000.0 1097890.0 1051180.0 790172.0 795807.0 801058.0 1080610.0 872927.0 1137730.0 1129810.0 1160890.0 True False 1036987.8531105452 1000679.7349466517 841107.7514399022 871440.2580119 864096.7072034538 1073865.5121580742 961170.9801065343 1133783.4801781797 924664.9841923733 1150605.4177587535 0.9012541024971686 0.86969843831942 0.7310132026653264 0.7573754169429907 0.7509930805702396 0.9333047590283733 0.8353610762400062 0.9853799249326142 0.8036334349906973 1.0 20.1339617377715 -6.2683843796071335 24.942755682267865 0.9058611639909193 0.7993938762893364 0.34922175043918047 0.07447256001705728 656.7688716977375 2358759.403814331 0.026165028950213703 0.02358050457556652 5.390333308486634e-07 6.2683843796071335 -0.10646728770158287 VS(ph)PAGGTLDDKPK ddPTM_KYSE-520_SHP099_60min_R1 3 VSPAGGTLDDKPK 13 1 C9JA69;Q8WY36-2;Q8WY36 C9JA69 BBX HMG box transcription factor BBX 1 VS(0.999)PAGGT(0.001)LDDKPK;VS(1)PAGGTLDDKPK;VS(0.999)PAGGT(0.001)LDDKPK 142.03 1.7254e-05 2033470000.0 2041160.0 1567210.0 1501650.0 1903350.0 1792360.0 1715400.0 1911890.0 2183600.0 1996250.0 1825780.0 True False 1927932.7858484169 1491918.8791698304 1598448.7617249507 2084243.8117369567 1933408.5348666199 1704693.5523046802 2105162.49944827 2176025.6012560693 1633781.3213673308 1809605.0096353453 1.065388731564639 0.8244444899445034 0.8833136254673915 1.151767264479973 1.0684146676054032 0.9420252172313527 1.1633270731674659 1.2024865037782813 0.9028386375303831 1.0 20.7872433976671 -5.2495356946555845 24.99413938307394 1.06953464901417 0.9143884929430586 0.253805111341449 0.10675889061006011 938.6929601945191 1970967.926099349 0.028724844762374843 0.04926332417413879 5.629428472304019e-06 5.2495356946555845 -0.15514615607111137 VS(ph)PAHS(ph)PPENGLDK ddPTM_KYSE-520_SHP099_60min_R1 1 VSPAHSPPENGLDK 14 0 H0YKH0;H0YLW9;H0YLI3;H0YNT2;A0A0D9SES8;H0YKT5;H0YKN8;H0YL70;Q04726-2;Q04726-7;Q04726-3;Q04726-6;Q04726-5;Q04726-4;Q04726 H0YKH0 TLE3 Transducin-like enhancer protein 3 2 VS(1)PAHS(1)PPENGLDK 169.64 4.2408e-06 0.0 480470.0 391490.0 320860.0 377060.0 375730.0 361170.0 319250.0 401320.0 422800.0 380940.0 True False 453817.37130680034 372682.23276152986 341543.1489941519 412895.6690327768 405297.8133887361 358915.804060791 351522.90557974606 399927.91458879167 346030.17792065546 377565.1679668351 1.201957727590653 0.987067304879845 0.9045939031752862 1.0935745774860384 1.0734512814602035 0.9506062383707963 0.9310257815165393 1.0592288392024576 0.9164780209572997 1.0 18.526366150366908 -6.265843560565849 24.915813608664394 0.9726419531142064 1.0426205651323943 0.19636301925598543 0.08043029247256017 750.7299782654654 4247089.1905409945 0.028439670374636947 0.025953848246916645 5.421961624793204e-07 6.265843560565849 0.06997861201818789 VS(ph)PATPK ddPTM_KYSE-520_SHP099_60min_R1 4 VSPATPK 7 0 J3KNZ9;Q9HAH7;Q9HAH7-1 J3KNZ9 FBRS Probable fibrosin-1 1 VS(0.997)PAT(0.003)PK;VS(0.999)PAT(0.001)PK;VS(1)PATPK;VS(1)PATPK 125.82 0.0022593000000000005 3319040000.0 8090300.0 6546100.0 6226800.0 5730200.0 6254400.0 6491100.0 5711700.0 6096500.0 7371900.0 6397600.0 True False 7641514.9313868 6231615.530103576 6628189.4912322555 6274796.485152545 6746585.697331889 6450586.63714871 6289094.376820149 6075352.664433794 6033348.790476063 6340922.241257481 1.2051109666141238 0.9827617013748101 1.0453037017400493 0.9895715869728403 1.0639754661293495 1.017294707570721 0.9918264469322597 0.9581181464273845 0.9514938933046397 1.0 22.59626125450388 -4.258115116482561 24.961892153436303 1.0020977168649388 1.2051110438418289 0.7736556375464676 0.03325988250605027 157.1326792223692 1179852.7788908747 0.008867366088484504 0.062381133473927146 5.5193112199278546e-05 4.258115116482561 0.20301332697689012 VS(ph)PCHSR ddPTM_KYSE-520_SHP099_60min_R1 2 VSPCHSR 7 0 A0A1B0GWK2;Q674X7-4;Q674X7-3;Q674X7-2;Q674X7;Q674X7-5 A0A1B0GWK2 KAZN Kazrin 1 VS(1)PCHSR;VS(1)PCHSR 123.35 0.0015735999999999999 858970000.0 316010.0 257760.0 257540.0 253410.0 266830.0 249610.0 245360.0 231730.0 287360.0 254410.0 True False 298480.29534968286 245376.8226943523 274141.44047856913 277494.0102095056 287828.0029449778 248052.0914018717 270163.38328283944 230926.18271618887 235182.66775610094 252156.1253279849 1.1837122535153295 0.9731146620974819 1.0871892964011383 1.1004849073111478 1.1414674244799476 0.983724234655117 1.0714131291930034 0.9158063577310217 0.9326867132424159 1.0 17.94395774582752 -6.941961454223818 1.498350991175414 0.9455064730162243 1.0849397737832611 0.4420818635504571 0.06425017929891041 0.37970513655689864 1.6744656082419236 0.041116799690029196 0.02075921177149876 1.1429797753775671e-07 6.941961454223818 0.13943330076703686 VS(ph)PENLVDK ddPTM_KYSE-520_SHP099_60min_R1 9 VSPENLVDK 9 0 A0A088AWL3;O75376-2;O75376;E7EVK1;J3QKP0;J3KS29 A0A088AWL3 NCOR1 Nuclear receptor corepressor 1 1 VS(1)PENLVDK;VS(1)PENLVDK;VS(1)PENLVDK;VS(1)PENLVDK;VS(1)PENLVDK;VS(1)PENLVDK;VS(1)PENLVDK;VS(1)PENLVDK;VS(1)PENLVDK 223.08 3.6693e-09 24584270000.0 17347750.0 15107430.0 14179960.0 13148990.0 14880990.0 14706850.0 13754420.0 14067770.0 17411210.0 13999000.0 True False 16385435.725617735 14381646.38608526 15094022.910338186 14398666.056211988 16052039.25174898 14615059.093920985 15144851.003803177 14018972.189312194 14249773.164886216 13874979.751057193 1.1809340279843838 1.0365165675279246 1.0878590946547586 1.0377432122100858 1.1569054182241894 1.0533391295801642 1.0915223860163996 1.0103778485330064 1.027012177354743 1.0 23.725982330227744 -7.2610441673809 24.84458592882248 1.0140212554267711 1.0887239603572492 0.3968662280756434 0.04485014617722684 34.258002010129665 2153757.9815436387 0.02149579423132166 0.011377642708139239 5.482212084532308e-08 7.2610441673809 0.07470270493047804 VS(ph)PGQAAPAMAR ddPTM_KYSE-520_SHP099_60min_R1 6 VSPGQAAPAMAR 12 0 Q96HA7-2;Q96HA7 Q96HA7-2 TONSL Tonsoku-like protein 1 VS(1)PGQAAPAMAR;VS(1)PGQAAPAMAR;VS(1)PGQAAPAMAR;VS(1)PGQAAPAMAR;VS(1)PGQAAPAMAR;VS(1)PGQAAPAMAR 185.32 1.0770999999999999e-07 4371570000.0 2191110.0 2088300.0 1618410.0 1703280.0 1896750.0 2102420.0 1787580.0 2188700.0 2253740.0 1904210.0 True False 2069564.7604305055 1987974.9333977934 1722735.2981475578 1865159.2190901958 2046013.4339687647 2089298.0169268989 1968286.0314995814 2181107.910546421 1844517.6281620075 1887340.180852964 1.0965509988216258 1.0533209400010488 0.9127847303971376 0.9882475019671633 1.084072418277075 1.107006589550095 1.0428888503873397 1.1556517116912606 0.9773106337027153 1.0 20.847923052144466 -5.765096423678143 24.99915922847446 1.070316892618763 1.0084870104650194 0.10627114428014162 0.06519066088189111 174.77554986411852 1194743.1234262285 0.020098230715416065 0.023688271472706687 1.7175270130787592e-06 5.765096423678143 -0.06182988215374352 VS(ph)PGQAAPAMARPR ddPTM_KYSE-520_SHP099_60min_R1 4 VSPGQAAPAMARPR 14 1 Q96HA7-2;Q96HA7 Q96HA7-2 TONSL Tonsoku-like protein 1 VS(1)PGQAAPAMARPR;VS(1)PGQAAPAMARPR;VS(1)PGQAAPAMARPR;VS(1)PGQAAPAMARPR 155.2 7.4771e-07 2895010000.0 873060.0 904520.0 933480.0 704130.0 835510.0 720440.0 636100.0 668680.0 1044790.0 712240.0 True False 824629.6213980389 861065.5014878013 993653.6144208075 771050.303495596 901259.8835983889 715943.4667263516 700403.1957377493 666360.505151085 855082.4730125864 705930.1077143347 1.1681462688537683 1.2197602738262079 1.4075807272735057 1.092247369916135 1.2766984631332614 1.0141846323065016 0.9921707377030844 0.9439468551761186 1.2112848902013518 1.0 19.429165827557377 -6.266610291267285 24.864721527876334 1.0263049235551798 1.2340493179457597 0.5019771834003315 0.09979565102217015 333.5753504539965 1604016.8812240413 0.03400977703375321 0.030894644899012082 5.412397798646618e-07 6.266610291267285 0.2077443943905799 VS(ph)PHHPAPTPNPR ddPTM_KYSE-520_SHP099_60min_R1 2 VSPHHPAPTPNPR 13 0 A8MZI9;Q01196-7;Q01196-3;Q01196-4;Q01196;Q01196-9;Q01196-10;Q01196-2;Q01196-8;Q01196-11 A8MZI9 RUNX1 Runt-related transcription factor 1 1 VS(1)PHHPAPTPNPR;VS(1)PHHPAPTPNPR 114.59 8.9795e-05 7028600000.0 2603635.0 2467448.0 2162737.0 2134389.0 2111968.0 1959035.0 2429097.0 2159172.0 2206909.0 2271287.0 True False 2459206.1763323057 2348908.094365046 2302150.4875215525 2337240.688832549 2278167.866145855 1946807.9358978625 2674653.830462157 2151682.336286531 1806189.9572485697 2251165.164214545 1.092414814969984 1.043418817821217 1.0226484151929371 1.0382359881834955 1.0119949892440394 0.8648001341017216 1.188119767034229 0.9558082945181302 0.80233560200758 1.0 21.10224047811619 -4.861425963043999 0.3380336728631891 0.9450855621630313 1.1417386959207692 0.16859140650132198 0.09440602883890109 9.293208717574988 1.1595923053955655 0.10189432881001817 0.7250203836529614 1.3758593418191118e-05 4.861425963043999 0.19665313375773785 VS(ph)PLLSEGELPVFSQL ddPTM_KYSE-520_SHP099_60min_R1 1 VSPLLSEGELPVFSQL 16 0 Q96IQ9-2 Q96IQ9-2 1 VS(0.887)PLLS(0.113)EGELPVFSQL 65.179 0.058796 0.0 17682.0 26591.0 16650.0 10107.0 20943.0 33994.0 19118.0 37061.0 40703.0 38722.0 True False 16701.144211806888 25313.528446095286 17723.28564094192 11067.566241219645 22591.09495063023 33781.83083656594 21050.634013699535 36932.44404110242 33312.361239130594 38378.953205260135 0.4351641412022115 0.6595679749448161 0.46179700488841896 0.28837592786930805 0.5886323899926991 0.8802176196909893 0.5484942202856742 0.9623098327767975 0.867985144382856 1.0 15.228027741781663 -6.840540374056111 0.7641090444096318 0.9769375261479856 0.4729593519644485 0.6391240717439483 0.14002997020164254 0.45461274029853377 0.5142374862306182 0.12313952939263834 0.07201506570433922 1.4436423902708984e-07 6.840540374056111 -0.5039781741835371 VS(ph)PLTFGR ddPTM_KYSE-520_SHP099_60min_R1 5 VSPLTFGR 8 0 O95810 O95810 SDPR Serum deprivation-response protein 1 VS(1)PLTFGR;VS(0.999)PLT(0.001)FGR;VS(0.995)PLT(0.005)FGR;VS(0.994)PLT(0.006)FGR;VS(1)PLTFGR 157.34 0.00066904 869630000.0 1955300.0 1861970.0 1764280.0 1577870.0 1759730.0 1856990.0 1696850.0 1941000.0 2059950.0 1744980.0 True False 1846835.6112060864 1772518.1663260486 1878008.3117478064 1727830.2903960857 1898210.7395059236 1845399.8365945346 1868384.1576601125 1934267.1240328033 1685915.007113657 1729520.8347738974 1.0678307968735894 1.0248608346818628 1.0858546910730456 0.9990225359857936 1.097535630297324 1.0670006394203317 1.0802900549644832 1.1183832453141118 0.9747873360161393 1.0 20.721940962649892 -3.9230325236059636 14.759184112891742 1.0554112489852678 1.2374069844540327 0.00026811806782744974 0.04593870367336238 5683355.383231567 21345087.58623108 0.010793766775730455 32114910.756218977 0.00011938986919890367 3.9230325236059636 0.1819957354687649 VS(ph)PLTPK ddPTM_KYSE-520_SHP099_60min_R1 2 VSPLTPK 7 0 Q7LBC6;Q7LBC6-2;Q7LBC6-3 Q7LBC6 KDM3B Lysine-specific demethylase 3B 1 VS(1)PLTPK;VS(1)PLTPK 100.71 0.0050482 1606430000.0 4007300.0 3716700.0 3079900.0 3124200.0 3581200.0 3741200.0 3348300.0 3885600.0 3891100.0 3759800.0 True False 3785007.080645504 3538144.1531195594 3278435.2820142377 3421123.0286750193 3863020.065759294 3717849.7830723273 3686778.840258925 3872121.760505861 3184574.3266486772 3726491.0970801343 1.0157027031706098 0.9494572939921545 0.8797646892496355 0.9180547972744698 1.0366374063757018 0.9976811123969737 0.9893432572930805 1.0390798366698997 0.8545771997533894 1.0 21.829386382260424 -5.739718661002489 24.990645668709128 0.9889030514369549 0.9370114552149379 0.12838260918624855 0.05746639957416539 462.260619442666 531848.7371373256 0.01696940886616641 0.021888663672506033 1.8208800554356117e-06 5.739718661002489 -0.051891596222017 VS(ph)PPAS(ph)PTLEVELGSAELPLQGAVGPELPPGGGHGR ddPTM_KYSE-520_SHP099_60min_R1 6 VSPPASPTLEVELGSAELPLQGAVGPELPPGGGHGR 36 0 Q7Z6J0 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 2 VS(1)PPAS(0.853)PT(0.147)LEVELGSAELPLQGAVGPELPPGGGHGR;VS(0.947)PPAS(0.83)PT(0.222)LEVELGSAELPLQGAVGPELPPGGGHGR;VS(0.996)PPAS(0.585)PT(0.419)LEVELGSAELPLQGAVGPELPPGGGHGR;VS(1)PPAS(0.86)PT(0.14)LEVELGSAELPLQGAVGPELPPGGGHGR;VS(1)PPAS(0.842)PT(0.158)LEVELGSAELPLQGAVGPELPPGGGHGR;VS(1)PPAS(0.87)PT(0.13)LEVELGSAELPLQGAVGPELPPGGGHGR 157.85 3.648e-08 1436754000.0 193468.0 214983.0 181835.0 200514.0 218165.0 218330.0 214477.0 235456.0 295473.0 237412.0 True False 182735.94437110348 204654.89398393827 193556.37504628685 219570.79027326783 235333.34431095092 216967.32148459842 236158.42825380468 234639.2580918436 241822.55146818762 235308.71438374123 0.77657958758424 0.8697293447882566 0.8225635652857093 0.9331179716327548 1.000104670697276 0.9220539156521348 1.003611059931583 0.9971549872530182 1.0276820903191186 1.0 17.844195224516262 -5.013289684975884 0.5826363256275101 1.0098775411161693 0.7379938054706076 0.8424785416357528 0.03267875741212898 0.6859236134783526 0.3167285177890255 0.01978806144182268 0.11339311750241964 9.698628293593633e-06 5.013289684975884 -0.2718837356455618 VS(ph)PPASPTLEVELGSAELPLQGAVGPELPPGGGHGR ddPTM_KYSE-520_SHP099_60min_R1 4 VSPPASPTLEVELGSAELPLQGAVGPELPPGGGHGR 36 0 Q7Z6J0 Q7Z6J0 SH3RF1 E3 ubiquitin-protein ligase SH3RF1 1 VS(0.745)PPAS(0.121)PT(0.134)LEVELGSAELPLQGAVGPELPPGGGHGR;VS(1)PPASPTLEVELGSAELPLQGAVGPELPPGGGHGR;VS(0.93)PPAS(0.067)PT(0.004)LEVELGSAELPLQGAVGPELPPGGGHGR;VS(1)PPASPTLEVELGSAELPLQGAVGPELPPGGGHGR 165.36 2.3937e-10 870010000.0 40598.5 28600.3 33437.3 12271.8 31816.0 32813.4 8139.6 39597.1 42903.0 46926.0 True False 38346.420273896714 27226.298658074476 35592.72185957159 13438.108182348784 34319.73819172282 32608.59939908731 8962.430202840713 39459.746902132596 35112.89669661747 46510.272147875556 0.8244720682772496 0.5853824843576644 0.7652658265771372 0.28892774782360836 0.7378958799167216 0.7011053234737258 0.192697866276624 0.8484092885260616 0.7549492848585991 1.0 15.505261761150132 -7.793041352250014 1.998199512034194 0.9616373027706089 0.5931899588671097 0.26201938760123733 0.2044944669457603 0.40643549028240283 3.194400983126326 0.1867464113344749 0.0539499120222803 1.6104922815139833e-08 7.793041352250014 -0.3684473439034992 VS(ph)PPQPPPPQPPR ddPTM_KYSE-520_SHP099_60min_R1 5 VSPPQPPPPQPPR 13 0 Q15637-5 Q15637-5 SF1 Splicing factor 1 1 VS(1)PPQPPPPQPPR;VS(1)PPQPPPPQPPR;VS(1)PPQPPPPQPPR;VS(1)PPQPPPPQPPR;VS(1)PPQPPPPQPPR 186.67 2.9404e-08 3356040000.0 1087810.0 1170610.0 901340.0 788570.0 813380.0 1128870.0 928570.0 1031400.0 1210670.0 1096210.0 True False 1027467.0108045272 1114372.1384785685 959441.81859499 863515.4557077832 877388.378500864 1121824.3035969355 1022438.9175698812 1027822.3141305705 990842.8465070935 1086498.4322384745 0.9456681945575136 1.0256546216846967 0.8830586314038997 0.7947691686298274 0.807537638773405 1.0325135042171025 0.9410403984324085 0.9459952114362322 0.911959757241154 1.0 20.051254662109905 -6.2687995178578255 24.999683735369416 0.9613476335535457 0.8929748433059599 0.2281500002607324 0.06860652352059164 1133.8031138149986 3851099.919323157 0.026988331756516687 0.024268043656589702 5.385183198459015e-07 6.2687995178578255 -0.0683727902475858 VS(ph)PPQPPPPQPPRK ddPTM_KYSE-520_SHP099_60min_R1 2 VSPPQPPPPQPPRK 14 1 Q15637-5 Q15637-5 SF1 Splicing factor 1 1 VS(1)PPQPPPPQPPRK;VS(1)PPQPPPPQPPRK 84.14 0.0027776 3665400000.0 3108000.0 3002900.0 3027400.0 2433000.0 2932800.0 3405800.0 2845600.0 2955800.0 3745900.0 3193200.0 True False 2935593.0443556057 2858636.1765552084 3222551.0480112657 2664231.5884918766 3163594.6746506416 3384543.1388826394 3133261.018379716 2945547.0196889085 3065738.986454544 3164910.732272004 0.9275437106082998 0.9032280586640973 1.0182123037947055 0.841803075620808 0.999584172277612 1.069396082603874 0.989999808345442 0.9306888152179824 0.9686652312792826 1.0 21.593733377690363 VS(ph)PQPMISR ddPTM_KYSE-520_SHP099_60min_R1 2 VSPQPMISR 9 0 Q9P270;D6RIF6 Q9P270;D6RIF6 SLAIN2 SLAIN motif-containing protein 2 1 VS(1)PQPMISR;VS(1)PQPMISR 78.705 0.017991999999999998 693600000.0 1037240.0 985530.0 764370.0 943640.0 939600.0 851240.0 937030.0 949410.0 993680.0 778810.0 True False 979702.229513322 938183.6594893116 813642.5132352423 1033323.2618842882 1013541.1744073031 845927.0954085551 1031754.1369315238 946116.7183039588 813252.7606343349 771910.349305012 1.2691917272457804 1.2154049499841575 1.0540634854394733 1.3386570899258428 1.3130296482225468 1.0958877493612877 1.3366243085877287 1.2256821263710134 1.0535585659222544 1.0 19.55807377513799 -7.8249539250328635 3.916554182243281 1.0053960502505233 1.2306339101946187 0.45646419448215614 0.08998529996018638 0.19620044142681364 5.566997953416859 0.0848625674743767 0.022962073842543246 1.4963944024488258e-08 7.8249539250328635 0.2252378599440954 VS(ph)PSDTTPLVSR ddPTM_KYSE-520_SHP099_60min_R1 4 VSPSDTTPLVSR 12 0 H0YJG4;Q9HCK8-2;Q9HCK8 H0YJG4 CHD8 Chromodomain-helicase-DNA-binding protein 8 1 VS(0.981)PS(0.018)DTT(0.001)PLVSR;VS(0.572)PS(0.416)DT(0.009)T(0.004)PLVSR;VS(0.89)PS(0.109)DTTPLVSR;VS(0.985)PS(0.015)DTTPLVSR 146.43 2.5113e-05 3547310000.0 2616320.0 2509090.0 2470960.0 2050850.0 2349640.0 2398980.0 2004340.0 2577580.0 2912630.0 2447950.0 True False 2471187.514095383 2388549.5501791285 2630242.0352757857 2245762.1673894613 2534543.300377155 2384007.0759635544 2206958.247673321 2568638.976591697 2383769.8134272387 2426263.0674762838 1.0185159009430202 0.984456130168777 1.0840712495416558 0.9256053877642487 1.0446283976178645 0.9825839200706779 0.9096121015306572 1.058681150871042 0.9824861307833181 1.0 21.210304552415597 -5.258938236726248 24.999499333743916 0.9877623696042211 1.0245585908749275 0.13756418277651905 0.04860562593682504 530.1948011294027 5299373.532305337 0.013089335596566188 0.021332787863570214 5.508860351988449e-06 5.258938236726248 0.036796221270706364 VS(ph)PSKSPSLS(ph)PSPPSPLEK ddPTM_KYSE-520_SHP099_60min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.904)PS(0.069)KS(0.06)PS(0.101)LS(0.846)PS(0.022)PPSPLEK 92.147 0.001225 202890000.0 483590.0 453540.0 458600.0 407990.0 403760.0 417640.0 378230.0 404010.0 491910.0 414740.0 True False 456764.2986872346 431751.257622581 488162.0897859433 446765.2469333334 435533.61491985223 415033.3538443075 416465.179569075 402608.58360664244 402591.5440419805 411065.7262628378 1.1111709624634987 1.0503217126560358 1.1875524000115971 1.0868462593441057 1.0595230570046832 1.0096520515527796 1.0131352554135946 0.9794263006719567 0.9793848485061027 1.0 18.649009562680305 -6.092740591063501 1.598840863173647 0.9911478474643529 1.112150565424925 0.73085361227583 0.032610706966851075 0.20215209808794785 1.0391850615183238 0.013491196183023788 0.013938165928505894 8.077173447647938e-07 6.092740591063501 0.12100271796057216 VS(ph)PSKSPSLSPSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.445)PS(0.252)KS(0.298)PS(0.008)LS(0.331)PS(0.197)PPS(0.47)PLEK 81.94 0.0035359000000000002 211130000.0 456350.0 362450.0 387260.0 364140.0 427650.0 375710.0 366130.0 369130.0 454790.0 342590.0 True False 431035.3557888292 345037.3579514587 412223.399237908 398747.7561173169 461303.62200434646 373365.0545274516 403141.993484455 367849.57418558985 372211.6003229294 339554.9191309871 1.2694127856900597 1.0161459561077857 1.2140109773491112 1.1743247812101214 1.358553789133573 1.099571920451024 1.1872659495441986 1.0833286560153994 1.0961749612566933 1.0 18.37328540722841 -7.673790017618426 1.0170570578216678 1.0084070910441822 1.1901046753977154 0.33474097946427117 0.08713702236309363 0.6026235861061519 1.2487982482943785 0.0810125444673799 0.028424387786125 2.1193856153823147e-08 7.673790017618426 0.18169758435353311 VS(ph)PSPSQESLSSSK ddPTM_KYSE-520_SHP099_60min_R1 4 VSPSPSQESLSSSK 14 0 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 VS(0.952)PS(0.048)PSQESLSSSK;VS(0.949)PS(0.047)PS(0.004)QESLSSSK;VS(0.955)PS(0.045)PSQESLSSSK;VS(0.999)PS(0.001)PSQESLSSSK 279.44 1.1406e-25 821440000.0 1134830.0 955380.0 691810.0 662706.0 726280.0 852860.0 789700.0 938270.0 955330.0 800180.0 True False 1071878.7176724798 909482.1107453847 736405.1795351364 725689.3789901766 783434.1040320748 847536.984387647 869530.5827292885 935015.3603638653 781866.1539095065 793091.0277306205 1.351520418456369 1.1467562725401268 0.9285254198907192 0.9150139815182258 0.9878236881254623 1.068650324809272 1.0963818178821099 1.1789508740747607 0.985846676574777 1.0 19.597126936480535 -4.398423028031965 3.242264256432203 1.026262521319787 1.3575210190777822 0.6424624934178825 0.07571014289460316 0.19400446885718506 3.337778104333842 0.021940253460924528 0.13025374948330498 3.9955537003192266e-05 4.398423028031965 0.3312584977579953 VS(ph)PSPTTYR ddPTM_KYSE-520_SHP099_60min_R1 7 VSPSPTTYR 9 0 P11274;P11274-2 P11274 BCR Breakpoint cluster region protein 1 VS(0.644)PS(0.313)PT(0.04)T(0.002)YR;VS(0.698)PS(0.294)PT(0.008)TYR;VS(0.979)PS(0.021)PTTYR;VS(1)PSPTTYR;VS(0.999)PS(0.001)PTTYR;VS(0.968)PS(0.032)PTTYR;VS(0.593)PS(0.391)PT(0.015)T(0.001)YR 211.53 8.2754e-09 12773940000.0 5913320.0 5426600.0 4522220.0 4555900.0 5066030.0 4892910.0 5128770.0 4902290.0 5887010.0 4927920.0 True False 5585296.351688832 5165897.9905073345 4813729.537007829 4988891.36621872 5464697.739232258 4862371.533757195 5647236.123571601 4885285.100193087 4818077.38344531 4884262.462663749 1.1435291191626007 1.057661833285263 0.9855591450715256 1.0214216382421653 1.1188378554603624 0.9955180686799915 1.1562106186430747 1.0002093739919087 0.9864493196824761 1.0 22.21970929696511 -6.931814613251643 0.009393649149841019 4.085534132856704e-08 2.081705669309412 0.14423922778221965 0.059709478972649124 3585.745971267453 24.149889239311698 2645.468111614131 2702.851459654838 1.1699987203449477e-07 6.931814613251643 2.0817056284540705 VS(ph)PSTSYTPSR ddPTM_KYSE-520_SHP099_60min_R1 7 VSPSTSYTPSR 11 0 Q9BTE3;Q9BTE3-2 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VS(1)PSTSYTPSR;VS(0.939)PS(0.054)T(0.005)S(0.002)YTPSR;VS(0.979)PS(0.019)T(0.001)SYTPSR;VS(0.986)PS(0.012)T(0.002)S(0.001)YTPSR;VS(0.977)PS(0.021)T(0.002)SYTPSR;VS(0.939)PS(0.036)T(0.009)S(0.014)YT(0.001)PSR;VS(0.982)PS(0.015)T(0.003)S(0.001)YTPSR 216.91 9.769600000000001e-10 26343810000.0 7698580.0 8129650.0 6424860.0 6100240.0 6918670.0 6774810.0 6746880.0 7395860.0 7838230.0 6240530.0 True False 7271524.420661249 7739089.411146565 6839016.755739458 6680004.975495974 7463129.967152594 6732525.897801829 7428920.473603371 7370205.487866697 6415005.017698719 6185243.75925887 1.1756245515427415 1.2512181754456644 1.105698824804105 1.0799905768461397 1.2066024004277631 1.0884819030331208 1.2010715766024265 1.1915788244940264 1.0371466780263774 1.0 22.5603990219784 -7.864328761382545 4.853043685337445 1.0032274398498344 1.1609452637023077 0.5441879209021265 0.053024601438264936 0.1581375521032715 5.679238612452954 0.05187537518085856 0.013621186551603917 1.3666938452170408e-08 7.864328761382545 0.15771782385247324 VS(ph)PVPLSGAAAGTEQK ddPTM_KYSE-520_SHP099_60min_R1 3 VSPVPLSGAAAGTEQK 16 0 Q96JM2;Q96JM2-3;H3BLX4;Q96JM2-2;H0Y6H9 Q96JM2 ZNF462 Zinc finger protein 462 1 VS(1)PVPLSGAAAGTEQK;VS(1)PVPLSGAAAGTEQK;VS(1)PVPLSGAAAGTEQK 257.16 3.3795999999999997e-29 1622380000.0 1794500.0 1670030.0 1211590.0 966490.0 1137840.0 1569600.0 1329860.0 1799740.0 1642520.0 1638030.0 True False 1694955.5077529387 1589799.2520338632 1289691.030012541 1058344.9190141845 1227381.5345759976 1559803.5441864436 1464295.2269828673 1793497.122002474 1344279.7725596833 1623518.3285680541 1.0440014614728077 0.9792308618012763 0.7943803327123818 0.6518835669367814 0.7560010336677567 0.9607551185222485 0.9019271302433512 1.1046977976431849 0.8280040630926171 1.0 20.63069224121949 -6.2953945843072825 21.42362847095961 0.9620487666802822 0.838999311410134 0.17796011480214102 0.12204751254469942 211.9624438244632 133733.19040259885 0.04687524005813606 0.04134655272156128 5.065302839914091e-07 6.2953945843072825 -0.12304945527014821 VS(ph)SGYVPPPVATPFSSK ddPTM_KYSE-520_SHP099_60min_R1 2 VSSGYVPPPVATPFSSK 17 0 Q15942;Q15942-2;H7C3R3 Q15942 ZYX Zyxin 1 VS(0.994)S(0.006)GYVPPPVATPFSSK;VS(0.927)S(0.073)GYVPPPVATPFSSK 134.93 1.5288e-05 1060060000.0 2018730.0 2169580.0 1759210.0 1601080.0 1620770.0 1782250.0 1757220.0 1822660.0 2238640.0 1835480.0 True False 1906747.022661517 2065350.120194025 1872611.4914355197 1753246.161817743 1748315.3780801697 1771126.3166579294 1934856.946414539 1816337.6178720417 1832159.4075219857 1819219.075181831 1.048112923107371 1.135294890192152 1.0293490855400975 0.9637355861841467 0.9610252013795676 0.9735640642845093 1.063564566142838 0.9984161020796788 1.007113124810909 1.0 20.794887855934977 -4.957589339953573 6.397996377288661 0.9957751209107905 1.0907127868023871 0.5632752797670673 0.03360686105181644 0.13555821015477484 14.11633121387733 0.009164334228240945 0.01919707262769939 1.1025813953625343e-05 4.957589339953573 0.09493766589159669 VS(ph)SLLHKPEFPDGEMMEVLI ddPTM_KYSE-520_SHP099_60min_R1 1 VSSLLHKPEFPDGEMMEVLI 20 1 Q8IY63;Q8IY63-2 Q8IY63 AMOTL1 Angiomotin-like protein 1 1 VS(0.5)S(0.5)LLHKPEFPDGEMMEVLI 99.366 0.00060349 62727000.0 72329.0 90491.0 81096.0 98310.0 76316.0 83221.0 72857.0 89262.0 105340.0 93956.0 True False 68316.7661857132 86143.67653023989 86323.57791818764 107653.35284202058 82321.63502135781 82701.58686973751 80222.09657579807 88952.37095590742 86212.9114053023 93123.62293666194 0.7336137065047273 0.9250464470098048 0.9269783025613239 1.1560262524927865 0.8840037836301633 0.8880838638117314 0.8614580709597301 0.955207370061283 0.9257899197493641 1.0 16.50685956635107 -4.2453745481738006 3.2361346732389147 0.9470603265097493 0.6990324703062025 0.3999281916824996 0.07885435299131442 0.4006429872734652 6.500297460242308 0.021031749156460618 0.25492262414103156 5.6836254704689065e-05 4.2453745481738006 -0.24802785620354673 VS(ph)SPLSPLSPGIK ddPTM_KYSE-520_SHP099_60min_R1 1 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VS(0.857)S(0.143)PLSPLSPGIK 104.59 0.0018464000000000002 47134000.0 214170.0 267650.0 220520.0 168770.0 196520.0 243980.0 196880.0 237950.0 273340.0 229820.0 True False 202289.56316268982 254791.69224915965 234735.0720444751 184809.8500574492 211985.00595415404 242457.23032021447 216782.5517636343 237124.60698794725 223708.34634066213 227783.97359725466 0.8880763644959432 1.1185672469638157 1.0305161874975044 0.8113382479849609 0.9306405652970353 1.0644174236283348 0.9517023886277794 1.0410065433629136 0.9821074889851616 1.0 17.797306720055598 -6.237657289312821 24.844862249493403 1.0069006717996376 0.9609909777318189 0.09065236251769437 0.08153418060428493 2377.394229161006 2483635.347876276 0.02851812728264806 0.028494679098444494 5.78552414899767e-07 6.237657289312821 -0.04590969406781875 VS(ph)SPMDEVLASLK ddPTM_KYSE-520_SHP099_60min_R1 1 VSSPMDEVLASLK 13 0 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 VS(0.5)S(0.5)PMDEVLASLK 79.633 0.010532 17500000.0 63072.0 65446.0 49310.0 53362.0 56697.0 58850.0 55228.0 67058.0 66888.0 55423.0 True False 59573.270429085154 62301.875923551255 52488.60149878953 58433.5084361297 61158.731338198086 58482.69532070088 60810.9852133381 66825.39144945491 54742.825309263906 54931.99533844149 1.0844912889482405 1.1341637153302588 0.9555196598157782 1.0637426890487964 1.1133535376130623 1.0646381031743553 1.1070230534805001 1.21651127066725 0.9965562869505815 1.0 15.745359076514026 -5.627199226844547 7.456313180713818 1.0939577347598517 1.056568589069182 0.011880555336920673 0.07194337283228767 0.7716443429940681 49.132995258688574 0.02107793724038682 0.02723775414144641 2.3593956433690825e-06 5.627199226844547 -0.037389145690669645 VS(ph)SPTKPK ddPTM_KYSE-520_SHP099_60min_R1 1 VSSPTKPK 8 1 Q8WUA4;A0A087WZD8;Q8WUA4-2 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 VS(0.799)S(0.155)PT(0.046)KPK 77.533 0.032538 829140000.0 5213400.0 4753200.0 4193800.0 3954600.0 4476600.0 4867600.0 4358900.0 4586200.0 5613300.0 5285700.0 True False 4924202.309344753 4524849.1373013435 4464139.058317253 4330443.995006161 4828882.951630195 4837219.502855455 4799540.150764455 4570291.542627126 4594066.2197777 5238872.810212376 0.9399354570597284 0.8637066218673695 0.8521182361242101 0.8265984214323027 0.9217408260450667 0.9233321132412378 0.916139850047226 0.8723807025278504 0.8769188308642033 1.0 22.32082500588673 -5.795430267489745 24.949296826650016 0.9121694994950504 0.868778578304912 0.22636938507779503 0.0423293026568964 302.45304636923873 221998.84217018486 0.013179290359315875 0.014944751960159736 1.6016577979453525e-06 5.795430267489745 -0.04339092119013843 VS(ph)VELTNSLFK ddPTM_KYSE-520_SHP099_60min_R1 1 VSVELTNSLFK 11 0 P14923 P14923 JUP Junction plakoglobin 1 VS(1)VELTNSLFK 136.99 0.00010831 228960000.0 298060.0 326050.0 267350.0 255470.0 297210.0 293520.0 244540.0 282750.0 405060.0 267120.0 True False 281526.01763212075 310386.06858897227 284583.8087751241 279749.7919901434 320598.7361064225 291688.0328042846 269260.48968041065 281769.2062443459 331511.3147316475 264753.524616215 1.063351349298254 1.1723585891402424 1.0749009260128073 1.0566423710342172 1.2109328348740978 1.101734276161625 1.0170232485883952 1.0642698965114694 1.25215071343131 1.0 18.01429036512274 -9.227346640627 9.279736780739606 0.9999999843464483 1.1099398458059708 0.1809904449444124 0.07165543847862123 0.0 0.0 0.06863725616595301 0.016646979824988316 5.924522584648119e-10 9.227346640627 0.1099398614595225 VS(ph)VS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 1 VSVSPGR 7 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 VS(1)VS(1)PGR 57.96 0.052463 806850000.0 2002800.0 1901900.0 1676600.0 1756100.0 1811800.0 1856500.0 1872600.0 2110000.0 2064200.0 2003500.0 True False 1891700.691517181 1810529.8691899006 1784676.3186548462 1922999.2160092834 1954378.352268147 1844912.8948662926 2061900.6828148237 2102680.9024777045 1689393.314247436 1985750.5486994118 0.9526376274986655 0.9117609814463987 0.8987414455575695 0.9683991865286261 0.9842013406710061 0.9290758580299211 1.038348288089502 1.0588847143236986 0.8507580750028858 1.0 20.921252971265147 -5.394392066932306 5.141473299730519 0.9801472909935698 0.9204713714762606 0.1676623314358363 0.055638117313924824 0.38547275962975874 14.472707247695743 0.01576858348740927 0.023625361998353307 4.03281159469706e-06 5.394392066932306 -0.05967591951730922 VSAEAEVAPVS(ph)PEVT(ph)QEVVEEHCASPEDK ddPTM_KYSE-520_SHP099_60min_R1 3 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VSAEAEVAPVS(1)PEVT(0.86)QEVVEEHCAS(0.14)PEDK;VSAEAEVAPVS(0.997)PEVT(0.879)QEVVEEHCAS(0.124)PEDK;VSAEAEVAPVS(0.999)PEVT(0.891)QEVVEEHCAS(0.11)PEDK 103.99 0.0019588 1834810000.0 1034960.0 1036280.0 960000.0 1019340.0 1051670.0 1001630.0 894540.0 1044440.0 1311300.0 950210.0 True False 977548.7056583907 986495.5533120085 1021883.1360543083 1116217.7671242526 1134430.4458162286 995378.4556342164 984968.8330690861 1040817.0814141295 1073200.9751829577 941791.8786521946 1.0379668032998628 1.0474666172783202 1.0850413549081914 1.185206405391476 1.2045447317296052 1.0568985337383774 1.0458455369977093 1.105145526316972 1.1395309298258376 1.0 19.845048756345093 -4.862306792301242 4.007843129013059 1.1108553952770714 1.0422249295259223 0.1429785255668532 0.058949605777786435 0.39497421864388643 11.605611751045728 0.01654131571316688 0.03835157243287617 1.3730716733876545e-05 4.862306792301242 -0.06863046575114917 VSAEAEVAPVS(ph)PEVTQEVVEEHCAS(ph)PEDK ddPTM_KYSE-520_SHP099_60min_R1 7 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VSAEAEVAPVS(0.963)PEVT(0.302)QEVVEEHCAS(0.735)PEDK;VSAEAEVAPVS(1)PEVTQEVVEEHCAS(1)PEDK;VSAEAEVAPVS(0.995)PEVT(0.007)QEVVEEHCAS(0.998)PEDK;VSAEAEVAPVS(0.999)PEVT(0.487)QEVVEEHCAS(0.514)PEDK;VSAEAEVAPVS(0.992)PEVT(0.386)QEVVEEHCAS(0.622)PEDK;VSAEAEVAPVS(1)PEVTQEVVEEHCAS(1)PEDK;VSAEAEVAPVS(1)PEVTQEVVEEHCAS(1)PEDK 215.12 1.7344999999999998e-22 10391820000.0 9026130.0 8329920.0 7539510.0 8460350.0 8491200.0 8111960.0 7849660.0 8743880.0 10606990.0 8206710.0 True False 8525432.575755937 7929738.139735162 8025518.878242516 9264419.120303024 9159409.131680818 8061330.24866122 8643180.238098994 8713549.521116925 8681027.996458389 8134004.93412376 1.0481223757303195 0.974887303850572 0.986662651822828 1.1389738751493685 1.1260638770029858 0.9910653256235861 1.0625983519925275 1.0712495986524253 1.067251380686992 1.0 22.955534435269747 -5.2168374846673276 24.999263167362702 1.0676077379796316 1.0003904006132245 0.26667546192769376 0.047005834354721124 588.2868146292556 329732.70730199676 0.01303954485164596 0.022584979633070067 6.069634160745745e-06 5.2168374846673276 -0.06721733736640711 VSAEAEVAPVSPEVTQEVVEEHCAS(ph)PEDK ddPTM_KYSE-520_SHP099_60min_R1 1 VSAEAEVAPVSPEVTQEVVEEHCASPEDK 29 0 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 1 VSAEAEVAPVSPEVTQEVVEEHCAS(1)PEDK 268.64 2.1841999999999993e-41 3021100000.0 771880.0 691260.0 561860.0 626150.0 620940.0 680040.0 576290.0 738930.0 838000.0 691380.0 True False 729062.2776953677 658050.8319975871 598078.3946077856 685659.1077411372 669804.4453346855 675795.6181119694 634547.0172484004 736366.8242975592 685840.3242609011 685254.9110855006 1.0639285700856527 0.960300789315293 0.8727823543218097 1.000589848608303 0.9774529660410017 0.986195950119428 0.9260014149234265 1.0745881749772404 1.0008542998611614 1.0 19.386281237033003 -7.258774147914873 24.997560526922438 1.0282909266081688 0.9676568312390761 0.20256667787011462 0.050278752265527984 359.2936176620901 3369892.374910002 0.02493553087791192 0.013581656365516143 5.510942149418395e-08 7.258774147914873 -0.0606340953690927 VSALEEDMDDVES(ph)S(ph)EEEEEEDEKLER ddPTM_KYSE-520_SHP099_60min_R1 10 VSALEEDMDDVESSEEEEEEDEKLER 26 1 Q8NAV1 Q8NAV1 PRPF38A Pre-mRNA-splicing factor 38A 2 VS(0.001)ALEEDMDDVES(0.999)S(0.999)EEEEEEDEKLER;VSALEEDMDDVES(1)S(1)EEEEEEDEKLER;VSALEEDMDDVES(1)S(1)EEEEEEDEKLER;VSALEEDMDDVES(1)S(1)EEEEEEDEKLER;VSALEEDMDDVES(1)S(1)EEEEEEDEKLER;VSALEEDMDDVES(1)S(1)EEEEEEDEKLER;VSALEEDMDDVES(1)S(1)EEEEEEDEKLER;VSALEEDMDDVES(1)S(1)EEEEEEDEKLER;VSALEEDMDDVES(1)S(1)EEEEEEDEKLER;VSALEEDMDDVES(1)S(1)EEEEEEDEKLER 179.49 5.333600000000001e-11 25791010000.0 13034220.0 12319860.0 10863980.0 11321300.0 11606000.0 11971360.0 11060720.0 11897610.0 14980380.0 11537550.0 True False 12311185.833526619 11727995.433113137 11564289.533782583 12397272.948127033 12519326.170893123 11896642.301689489 12178845.519824596 11856339.96783304 12260320.616648577 11435336.28307806 1.0765914992587176 1.0255925267775599 1.0112767344582028 1.0841196656780825 1.0947930048562844 1.0403403981476318 1.0650185721120224 1.0368160300959386 1.0721434257068 1.0 23.446995456440828 -5.261793532642705 24.99999046558132 1.0590275532674305 1.0365974824331574 0.06836423867539576 0.02967370045889163 75.69332228711565 5342780.86252331 0.008110877428087932 0.012811892028269304 5.4727608084566e-06 5.261793532642705 -0.022430070834273064 VSAS(ph)LPR ddPTM_KYSE-520_SHP099_60min_R1 8 VSASLPR 7 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 VS(0.001)AS(0.999)LPR;VS(0.002)AS(0.998)LPR;VS(0.006)AS(0.994)LPR;VSAS(1)LPR;VS(0.013)AS(0.987)LPR;VS(0.001)AS(0.999)LPR;VS(0.327)AS(0.673)LPR;VS(0.051)AS(0.949)LPR 117.76 0.002643 12670820000.0 9126850.0 6565420.0 6642200.0 5397910.0 5207230.0 5398780.0 4949830.0 5534080.0 6677790.0 6055640.0 True False 8620565.436575595 6250007.368303674 7070366.839895764 5910925.7434591865 5617009.375914158 5365084.211444238 5450207.122085489 5514883.568143982 5465271.669386873 6001991.740816624 1.4362841218109859 1.0413222207222341 1.1780034270646595 0.9848273704313617 0.9358575650338891 0.8938839710422979 0.9080664148571355 0.9188422454232891 0.9105763395541219 1.0 22.517009903006944 -1.0000000000000195 0.5582218007096099 0.9165158702175835 24.235474572617665 0.836643616173902 0.06492798522805321 50.77856480759079 0.45382050652394273 0.030715836611510366 1423.947927790622 0.0999999999999955 1.0000000000000195 23.31895870240008 VSASS(ph)PTTK ddPTM_KYSE-520_SHP099_60min_R1 1 VSASSPTTK 9 0 Q9BVI0;Q5JWZ0;Q5JXL1 Q9BVI0 PHF20 PHD finger protein 20 1 VSAS(0.051)S(0.942)PT(0.007)TK 147.83 0.00030888 563000000.0 1605300.0 1650000.0 1347600.0 1146000.0 1232700.0 1599700.0 1264300.0 1515300.0 1709500.0 1684300.0 True False 1516250.8089137885 1570731.523299509 1434468.452236235 1254915.495442537 1329706.4768964276 1589715.6789214162 1392107.7823789273 1510043.7779736787 1399097.8929880792 1669378.412365572 0.9082726826239499 0.9409080120268977 0.8592829771912164 0.7517262030867372 0.7965278974778304 0.952280002632075 0.8339078617928563 0.9045545136970411 0.8380951152983372 1.0 20.670879589191138 -10.615907366179936 2.7411331165535757 1.0119703148345078 0.8645839190948689 0.312419038570955 0.06005130380205724 70927582.4868434 68078650.68024732 6088648.079609839 0.01573620812559018 2.4215455006588744e-11 10.615907366179936 -0.14738639573963896 VSDEVGFGLEHVS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 VSDEVGFGLEHVSR 14 0 Q6VY07-2;Q6VY07 Q6VY07-2 PACS1 Phosphofurin acidic cluster sorting protein 1 1 VSDEVGFGLEHVS(1)R 139.46 4.0991e-06 166490000.0 97705.0 104080.0 106800.0 106240.0 100190.0 121430.0 107640.0 102910.0 113170.0 114950.0 True False 92285.10887991129 99079.84057273499 113684.49888604181 116337.01765777914 108074.38299687933 120672.11032782846 118521.30166516476 102553.02922937453 92621.18078353953 113931.63242974677 0.810004271086142 0.8696429469123091 0.9978308610310017 1.0211125319345846 0.9485897875071774 1.0591624797638008 1.0402844156406528 0.9001277963133849 0.8129540392625567 1.0 16.79780883266517 -4.611932804913394 3.884519120746832 0.975161994670244 0.8209129310552827 0.3829870729703291 0.06896197297579232 0.22885532172029996 6.386708290186195 0.019292450381732627 0.06061584395050358 2.4438086353930807e-05 4.611932804913394 -0.15424906361496127 VSDGVTKS(ph)PEKR ddPTM_KYSE-520_SHP099_60min_R1 5 VSDGVTKSPEKR 12 2 A0A669KB77;P11137-3;P11137;P11137-2 A0A669KB77 MAP2 Microtubule-associated protein 2 1 VSDGVT(0.239)KS(0.761)PEKR;VSDGVTKS(1)PEKR;VSDGVTKS(1)PEKR;VSDGVT(0.034)KS(0.966)PEKR;VS(0.001)DGVT(0.032)KS(0.968)PEKR 181.58 2.3226999999999997e-07 6226740000.0 7272500.0 6182480.0 5630160.0 5831140.0 6239730.0 5793230.0 5723490.0 6358800.0 7856790.0 6741150.0 True False 6869079.927630673 5885464.380708319 5993089.12217451 6385329.792403827 6730761.251792773 5757072.302680445 6302076.2250794675 6336742.8069550805 6430194.989558244 6681428.655535347 1.0280855011360277 0.8808691500181481 0.8969771932248995 0.9556833009230427 1.007383540078147 0.8616528888489885 0.9432228569646406 0.9484113553626431 0.9623982116805267 1.0 22.671725189071637 -8.035438345126746 1.6069297565810876 0.9995246811271398 0.9361242703025512 0.12210031561041834 0.049132013642734854 0.8873687177977344 5.148456716689655 0.046334712648086585 0.013473461673247552 9.21640720718506e-09 8.035438345126746 -0.06340041082458858 VSDQNS(ph)PVLPK ddPTM_KYSE-520_SHP099_60min_R1 6 VSDQNSPVLPK 11 0 Q9UPU5 Q9UPU5 USP24 Ubiquitin carboxyl-terminal hydrolase 24 1 VSDQNS(1)PVLPK;VSDQNS(1)PVLPK;VSDQNS(1)PVLPK;VSDQNS(1)PVLPK;VSDQNS(1)PVLPK;VSDQNS(1)PVLPK 158.52 3.829e-05 27749000000.0 48177800.0 45230800.0 34463100.0 30870100.0 32360800.0 40854600.0 34139300.0 37271700.0 42766900.0 40084700.0 True False 45505281.39393675 43057844.47518505 36684646.56890961 33803985.02256598 34907410.852234885 40599611.28715556 37590433.61146006 37142413.17198016 35001509.02581567 39729580.74342467 1.1453753234349944 1.0837729386890451 0.9233585122838477 0.8508517932991431 0.8786252006450417 1.0218988100918958 0.9461573192584308 0.9348805720313902 0.8809936669570443 1.0 25.24371023330899 -4.678161970819758 3.7871373339049366 0.9260633586160266 1.1318472100077022 0.687202814132214 0.050528693256306774 0.12466254124424418 3.36840020418049 0.013926918693334876 0.04146474052228989 2.098157226601624e-05 4.678161970819758 0.20578385139167554 VSDS(ph)LTDLALK ddPTM_KYSE-520_SHP099_60min_R1 7 VSDSLTDLALK 11 0 Q8N3C0 Q8N3C0 ASCC3 Activating signal cointegrator 1 complex subunit 3 1 VS(0.001)DS(0.918)LT(0.081)DLALK;VSDS(0.999)LT(0.001)DLALK;VSDS(0.999)LT(0.001)DLALK;VSDS(0.999)LT(0.001)DLALK;VSDS(0.999)LTDLALK;VSDS(1)LTDLALK;VSDS(0.992)LT(0.008)DLALK 253.88 5.5727e-15 2102557000.0 3150280.0 2922190.0 2478460.0 2060129.0 2373790.0 2692554.0 2215453.0 2571200.0 3109240.0 2754200.0 True False 2975527.6884725117 2781803.606103384 2638225.497276212 2255923.0407596296 2560593.7679824564 2675748.7717338074 2439412.609977652 2562281.10732259 2544680.3935620124 2729799.9307351783 1.0900167645880023 1.0190503614505553 0.9664537930315268 0.8264059997071191 0.938015178018137 0.9801995895769496 0.8936232221680361 0.9386332963355769 0.9321856759211983 1.0 21.380363788046875 -4.635598926756395 2.330886452311727 0.9270823419983083 1.083784917284282 0.5569281783116833 0.045333676307480524 0.23302666294311053 2.3305779122395625 0.012290202734964789 0.05379175534729847 2.3142009804380123e-05 4.635598926756395 0.15670257528597364 VSDS(ph)PSHIATK ddPTM_KYSE-520_SHP099_60min_R1 2 VSDSPSHIATK 11 0 Q9P2D3 Q9P2D3 HEATR5B HEAT repeat-containing protein 5B 1 VS(0.011)DS(0.603)PS(0.386)HIATK;VSDS(0.777)PS(0.222)HIATK 137.58 0.00010598 328930000.0 713650.0 865450.0 767510.0 1245950.0 641990.0 741470.0 708450.0 702440.0 844930.0 637960.0 True False 674062.4118739959 823872.4829330653 816984.9226594194 1364364.7133914733 692510.9605765704 736842.2106956685 780067.0398057043 700003.399590729 691512.0109519844 632308.1707253689 1.0660346379847148 1.3029603618563688 1.292067634872081 2.157752780303798 1.0952111527866835 1.1653213493198746 1.233681732929103 1.1070604999263283 1.0936313066438763 1.0 19.2702683366639 VSDYEMK ddPTM_KYSE-520_SHP099_60min_R1 4 VSDYEMK 7 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 ;;; 125.25 0.017247 2387830000.0 4932400.0 5213100.0 3510750.0 3221690.0 4947160.0 5319900.0 4006550.0 4539600.0 4495800.0 4477720.0 False True 4658789.939504366 4962654.850977371 3737058.562398607 3527878.4489635853 5336473.346510038 5286696.530783287 4411571.174159839 4523853.187150605 3679476.049895176 4438050.88441345 1.0497378378121256 1.1182059377476594 0.8420495077069201 0.7949161784858272 1.2024362688701635 1.191220350661211 0.994033482052536 1.0193333300973395 0.8290747775825625 1.0 22.08149477815475 -7.64774031703831 9.629636424971341 0.9149580683374038 1.0264000347231406 0.10551238087718207 0.13052241813842455 0.7010725966747045 55.38307435578575 0.09569856739269719 0.03599041794173578 2.250399812444664e-08 7.64774031703831 0.11144196638573678 VSEDEEKLPAS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 5 VSEDEEKLPASPK 13 1 Q7RTP6;J3QR21;J3QLA3 Q7RTP6 MICAL3 Protein-methionine sulfoxide oxidase MICAL3 1 VSEDEEKLPAS(1)PK;VSEDEEKLPAS(1)PK;VSEDEEKLPAS(1)PK;VSEDEEKLPAS(1)PK;VSEDEEKLPAS(1)PK 216.71 4.2327e-11 3779430000.0 3861360.0 3422140.0 3281630.0 3183170.0 3326900.0 3455840.0 3114390.0 3636920.0 4344370.0 3292390.0 True False 3647162.6633696808 3257735.2576631363 3493169.120593651 3485697.519745045 3588708.102528373 3434270.820681243 3429222.934717316 3624304.373383511 3555541.9206555234 3263221.9860406616 1.117656928940609 0.9983186162630074 1.070466286246125 1.0681766470856362 1.0997437863191866 1.05241716174146 1.050870259328593 1.110652106687035 1.0895801560130882 1.0 21.63786570179432 -4.9544172608891826 24.999670212076232 1.0717943856692729 1.0520890080323893 0.0 0.03972234902928511 460.29858937926866 252444.13280145658 0.009830344585529952 0.02046349333176738 1.1106641120673191e-05 4.9544172608891826 -0.019705377636883625 VSEEENLKKT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 8 VSEEENLKKTPK 12 2 Q9Y3B9 Q9Y3B9 RRP15 RRP15-like protein 1 VSEEENLKKT(1)PK;VSEEENLKKT(1)PK;VSEEENLKKT(1)PK;VSEEENLKKT(1)PK;VSEEENLKKT(1)PK;VSEEENLKKT(1)PK;VSEEENLKKT(1)PK;VSEEENLKKT(1)PK 171.91 3.8684e-05 16985420000.0 18839740.0 19152156.0 17101383.0 14106548.0 15946512.0 16397804.0 14898655.0 13865684.0 19664631.0 17458979.0 True False 17794662.06610941 18232057.677787736 18203765.511360265 15447230.080631688 17201411.77115813 16295459.222779432 16404756.444260625 13817587.178478988 16094029.71540687 17304306.02894012 1.0283372263729738 1.0536139182522561 1.0519789398613195 0.8926812814566146 0.9940538350622148 0.9416996668647984 0.9480158532116187 0.7985057103919763 0.9300592400811015 1.0 24.044627749102233 -5.348327203444065 0.8675144775125275 0.9111142350842489 1.0622827170925562 0.39446922230523385 0.05848566655830597 0.7150857570357606 1.0132305447725756 0.02633204594999221 0.07599164307742978 4.484074263051419e-06 5.348327203444065 0.15116848200830724 VSEEQTQPPS(ph)PAGAGMSTAMGR ddPTM_KYSE-520_SHP099_60min_R1 7 VSEEQTQPPSPAGAGMSTAMGR 22 0 Q16666-3;Q16666-2;Q16666;H3BM18;X6RHM1 Q16666-3 IFI16 Gamma-interferon-inducible protein 16 1 VSEEQT(0.001)QPPS(0.999)PAGAGMSTAMGR;VSEEQTQPPS(1)PAGAGMSTAMGR;VSEEQTQPPS(1)PAGAGMSTAMGR;VSEEQTQPPS(1)PAGAGMSTAMGR;VSEEQTQPPS(1)PAGAGMSTAMGR;VSEEQTQPPS(1)PAGAGMSTAMGR;VSEEQTQPPS(1)PAGAGMSTAMGR 316.27 2.738e-54 8034080000.0 6213970.0 8573390.0 5662880.0 4929020.0 5191880.0 7723010.0 5505860.0 7844920.0 7767020.0 7969050.0 True False 5869268.696857908 8161511.475479253 6027918.305728359 5397472.578836095 5600451.418243712 7674807.829884901 6062446.060815344 7817707.803538083 6356724.958640702 7898450.416827088 0.74309116182509 1.0333054010305276 0.7631773306934113 0.6833584176634396 0.7090569824066183 0.9716852578493457 0.7675487900639006 0.989777410880875 0.804806591568664 1.0 22.913138210558024 -6.264711977390501 24.958513969326372 0.8974237683468568 0.7931005030840391 0.21450581954069659 0.1141107667509772 555.8435182624 4239135.341528988 0.040296433121863005 0.036975874588038506 5.436107327425689e-07 6.264711977390501 -0.10432326526281765 VSEFNVS(ph)S(ph)EGSGEKLVLADLLEPVK ddPTM_KYSE-520_SHP099_60min_R1 1 VSEFNVSSEGSGEKLVLADLLEPVK 25 1 Q9BVJ6-3;Q9BVJ6 Q9BVJ6-3 UTP14A U3 small nucleolar RNA-associated protein 14 homolog A 2 VS(0.426)EFNVS(0.544)S(0.551)EGS(0.479)GEKLVLADLLEPVK 49.793 0.057197000000000005 2273400000.0 911080.0 934620.0 788170.0 375740.0 840640.0 837070.0 847820.0 858740.0 1137500.0 721620.0 True False 860540.5762070474 889719.45230678 838976.6993165876 411450.21662965 906793.5854126828 831845.5356346485 933525.9195258273 855761.2313714235 930958.6740414979 715227.0082118643 1.2031712537792454 1.2439679180057301 1.1730215577486502 0.5752722029587708 1.2678402451268629 1.16305106782019 1.3052162583453484 1.1964889769905476 1.3016268448376738 1.0 19.44804169065271 -5.890816139306397 21.05671680766288 1.218404110597733 1.0529235156768746 0.1354005035045177 0.1923226484267685 6.530806713078068 1228.8812703558413 0.061383024255383896 0.06960192387304227 1.2858309075358945e-06 5.890816139306397 -0.16548059492085843 VSELKEELKK ddPTM_KYSE-520_SHP099_60min_R1 2 VSELKEELKK 10 2 A0A1W2PPS1;Q00839-2;Q00839;A0A1X7SBS1 A0A1W2PPS1 HNRNPU Heterogeneous nuclear ribonucleoprotein U 0 ; 91.961 0.0022356999999999998 4121400000.0 7957000.0 6978000.0 5697800.0 4984000.0 7348700.0 6807300.0 5921800.0 6132600.0 6884200.0 6387500.0 False True 7515609.348113747 6642766.405808468 6065089.304802331 5457677.861505754 7927000.881616604 6764813.115660273 6520433.33519856 6111327.441959602 5634202.81655954 6330911.719399804 1.1871290710125804 1.0492590483378639 0.9580119852591036 0.862068230201631 1.2521104752299586 1.06853695257365 1.0299359119505656 0.9653155363441049 0.8899512528811071 1.0 22.593981847546697 -7.2441478191600615 3.0247983807873187 0.9410944844180151 1.0562276048385097 0.1825405211176162 0.10458994197663915 0.4960227738507746 9.158693124150648 0.06526882398780996 0.030741057750402267 5.699702406599745e-08 7.2441478191600615 0.11513312042049462 VSES(ph)PSPVTTNTPAQFASVS(ph)PTVPEFLK ddPTM_KYSE-520_SHP099_60min_R1 1 VSESPSPVTTNTPAQFASVSPTVPEFLK 28 0 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2S3;Q9ULH7-2;Q9ULH7-3 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2;Phosphatase and actin regulator 2 VS(0.139)ES(0.515)PS(0.337)PVT(0.004)T(0.005)NTPAQFAS(0.251)VS(0.712)PT(0.037)VPEFLK 118.16 0.00020379 82399000.0 87802.0 87508.0 81390.0 82297.0 83646.0 99242.0 100010.0 119800.0 143840.0 111860.0 True False 82931.4480310524 83303.98432781419 86636.52962860433 90118.48213650472 90228.46431936284 98622.59386604922 110119.98680354073 119384.44176153009 117722.28191132232 110869.00742576303 0.748012902402708 0.7513730506119471 0.7814314535702453 0.8128374577254812 0.8138294588754127 0.8895415964834545 0.9932440937317506 1.0768062647396652 1.0618141592919752 1.0 16.758496602045206 -6.571004838339195 1.2856230307499479 1.0576963325386919 0.7699971774313162 0.9552583503119323 0.025907256444216403 0.08463589291415936 0.28521464989074413 0.01530234009569131 0.010515623604284086 2.6853145292413037e-07 6.571004838339195 -0.28769915510737565 VSESPS(ph)PVTTNTPAQFAS(ph)VSPTVPEFLK ddPTM_KYSE-520_SHP099_60min_R1 1 VSESPSPVTTNTPAQFASVSPTVPEFLK 28 0 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2S3;Q9ULH7-2;Q9ULH7-3 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2;Phosphatase and actin regulator 2 VS(0.001)ES(0.042)PS(0.587)PVT(0.17)T(0.17)NT(0.03)PAQFAS(0.523)VS(0.352)PT(0.125)VPEFLK 91.11399999999999 0.0037324 92962000.0 130700.0 104770.0 114510.0 95869.0 132180.0 124910.0 126990.0 144530.0 168330.0 139080.0 True False 123449.81045600933 99736.69193702395 121891.49782247817 104980.36093593405 142581.81399867745 124130.39035698818 139827.38850296618 144028.6591635555 137765.51525398277 137847.8594026026 0.8955511604678468 0.7235273175024791 0.8842465769923796 0.7615668563218327 1.0343418796388322 0.9004883419658279 1.014360245483262 1.0448378363489932 0.9994026447057163 1.0 17.072717338787253 -5.7644064614358035 24.999992471706843 0.9969989772931985 0.8144606777562244 0.6908527183165223 0.05985478647175504 42.66950493372193 359524.4053418913 0.017563645532263587 0.02078435202647549 1.720257811334413e-06 5.7644064614358035 -0.1825382995369741 VSESPS(ph)PVTTNTPAQFASVS(ph)PTVPEFLK ddPTM_KYSE-520_SHP099_60min_R1 1 VSESPSPVTTNTPAQFASVSPTVPEFLK 28 0 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2S3;Q9ULH7-2;Q9ULH7-3 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2;Phosphatase and actin regulator 2 VS(0.015)ES(0.109)PS(0.832)PVT(0.019)T(0.019)NT(0.006)PAQFAS(0.142)VS(0.716)PT(0.142)VPEFLK 121.86 0.00015686 123640000.0 117860.0 88470.0 78859.0 84750.0 82581.0 100400.0 115110.0 113700.0 135700.0 115610.0 True False 111322.07085191498 84219.76840382273 83942.3773188612 92804.61451898338 89079.65487838385 99773.36635851102 126746.44216533928 113305.60123777959 111060.3007186208 114585.78534321906 0.9715172830423227 0.7349931595054227 0.7325723436587567 0.809913849619353 0.7774058065890403 0.870730746048994 1.106127097577552 0.9888277232502711 0.9692327925838413 1.0 16.806068559659103 -6.576742377215539 5.4657424876636105 1.0142020994994105 0.7996977782078475 0.6630898814934751 0.07094621142763076 0.11716314614779716 7.4941023421919954 0.027421785340512223 0.021231368539406485 2.650071690681594e-07 6.576742377215539 -0.21450432129156305 VSESPS(ph)PVTTNTPAQFASVSPT(ph)VPEFLK ddPTM_KYSE-520_SHP099_60min_R1 1 VSESPSPVTTNTPAQFASVSPTVPEFLK 28 0 Q9ULH7-4;Q9ULH7;Q9ULH7-5;I3L2S3;Q9ULH7-2;Q9ULH7-3 Q9ULH7-4 MKL2 MKL/myocardin-like protein 2;Phosphatase and actin regulator 2 VS(0.03)ES(0.03)PS(0.621)PVT(0.14)T(0.14)NT(0.037)PAQFAS(0.283)VS(0.283)PT(0.435)VPEFLK 61.602 0.044802999999999996 61915000.0 35829.0 39410.0 34484.0 34709.0 38320.0 39176.0 37611.0 38421.0 50195.0 44123.0 True False 33841.493946659226 37516.68444438402 36706.893816350836 38007.732924358636 41335.56598902502 38931.48805240066 41413.0869279869 38287.726518528805 41080.85331297844 43732.10454717457 0.7738363908408257 0.8578751201857694 0.8393580459123453 0.8691036783596602 0.9451995603009601 0.8902267214330972 0.9469721925528166 0.8755061508011164 0.9393751738762954 1.0 15.41640515734689 -1.0000000000000002 0.19157250341003354 0.9778519034651507 0.130706772282697 0.7478049777860264 0.031130867056905646 28.54986829077485 0.33514944910532174 0.06225627207997309 7.170688607238539 0.09999999999999995 1.0000000000000002 -0.8471451311824537 VSFELFADK ddPTM_KYSE-520_SHP099_60min_R1 4 VSFELFADK 9 0 P62937;C9J5S7;F8WE65 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ;;; 133.86 0.003849 3315070000.0 1204110.0 1446920.0 1154920.0 960620.0 1373530.0 1564110.0 1198790.0 1354850.0 1275200.0 1338400.0 False True 1137315.6179662242 1377407.7913288034 1229367.991137336 1051917.0359790649 1481618.9966833363 1554347.809312854 1319975.3922629387 1350150.3415743676 1043655.8251760161 1326542.817259443 0.8573531160613792 1.0383440122757925 0.9267458050672919 0.7929763157982805 1.1169025058265902 1.1717283370649447 0.9950492174763931 1.0177962776683653 0.7867486911068168 1.0 20.33923981198534 -4.245495309454458 23.347264419717845 0.9862522459388591 0.857352869496203 0.09379150173914519 0.11668080855477556 3218.4872467231316 4712711.377159836 0.030471845163774457 0.6892165816670355 5.6820452835172797e-05 4.245495309454458 -0.12889937644265603 VSFELFADKVPK ddPTM_KYSE-520_SHP099_60min_R1 4 VSFELFADKVPK 12 1 P62937;C9J5S7;F8WE65 P62937 PPIA Peptidyl-prolyl cis-trans isomerase A;Peptidyl-prolyl cis-trans isomerase A, N-terminally processed;Peptidyl-prolyl cis-trans isomerase 0 ;;; 139.89 3.9904e-05 3699600000.0 2847780.0 2482870.0 1852570.0 1640020.0 2899570.0 2484210.0 1732730.0 1768390.0 2072370.0 1504410.0 False True 2689807.966491311 2363589.1983361505 1971989.6264168045 1795887.0077100054 3127749.6627034754 2468705.1239190884 1907891.2582151708 1762255.867835327 1696079.8481963773 1491082.0978132691 1.803930159470106 1.5851502756303275 1.3225225018185152 1.204418596631094 2.097637458923586 1.6556466793743565 1.2795346822372617 1.1818637420566882 1.1374825374697648 1.0 20.507928262792174 -6.921008921390661 3.5287872319129363 1.1323446362270835 1.5999362254666165 0.4910423327359199 0.2341870611837375 0.23854318496226537 5.891655087540911 0.11629124012149074 0.0736610246305325 1.1994746629745333e-07 6.921008921390661 0.46759158923953303 VSGAGFS(ph)PSSK ddPTM_KYSE-520_SHP099_60min_R1 10 VSGAGFSPSSK 11 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 VSGAGFS(0.994)PS(0.006)S(0.001)K;VSGAGFS(0.845)PS(0.138)S(0.016)K;VSGAGFS(0.918)PS(0.078)S(0.004)K;VSGAGFS(0.998)PS(0.002)SK;VSGAGFS(0.981)PS(0.019)SK;VSGAGFS(0.972)PS(0.025)S(0.003)K;VSGAGFS(0.905)PS(0.094)S(0.001)K;VSGAGFS(0.798)PS(0.176)S(0.026)K;VSGAGFS(0.992)PS(0.007)S(0.001)K;VSGAGFS(0.999)PS(0.001)SK 176.86 6.7619000000000004e-06 42767380000.0 39304800.0 38953620.0 31291230.0 27756050.0 29936040.0 37238190.0 31887660.0 38058090.0 46877790.0 40234490.0 True False 37124484.39182369 37082229.62462431 33308312.753538165 30393976.64683929 32291836.035232015 37005772.64340476 35111175.86637133 37926075.36861498 38365965.028919354 39878043.72055956 0.9309504912520008 0.9298908914507801 0.8352544319110042 0.7621732113997695 0.8097647984317647 0.9279736213420627 0.8804638490395502 0.9510515519361291 0.9620824255513658 1.0 25.24909130203509 -7.30928425069325 1.1360025305711563 0.991849707979263 0.8572754432944634 0.47234819587657495 0.05177116240232725 0.5045179707336483 1.145939039296722 0.05158038736397987 0.019661729036591448 4.905866764728113e-08 7.30928425069325 -0.1345742646847996 VSGEEELHTGPPAPQGPLSVPQGLPTQSLAS(ph)PPAR ddPTM_KYSE-520_SHP099_60min_R1 2 VSGEEELHTGPPAPQGPLSVPQGLPTQSLASPPAR 35 0 Q9UPN7 Q9UPN7 PPP6R1 Serine/threonine-protein phosphatase 6 regulatory subunit 1 1 VSGEEELHTGPPAPQGPLSVPQGLPT(0.001)QS(0.003)LAS(0.997)PPAR;VSGEEELHTGPPAPQGPLSVPQGLPTQS(0.003)LAS(0.997)PPAR 203.44 3.4279e-16 891010000.0 213504.0 296858.0 197593.0 209162.0 162864.0 248080.0 230331.0 278069.0 312516.0 267722.0 True False 201660.50751032773 282596.496087058 210330.16093997823 229040.69359315166 175680.47023059943 246531.64069939652 253615.10529393426 277104.4435407927 255770.97228725493 265350.19136456406 0.7599787528823252 1.064994506443748 0.7926512502529387 0.8631638530777358 0.6620702601613443 0.9290803199786927 0.9557750985206301 1.044297130956576 0.9638997091803553 1.0 18.01753806362579 -6.511621108748177 17.71204801217864 0.9872211682473852 0.837026749786615 0.38007223592802375 0.09804157705297717 13.73887183799282 21618.953826141893 0.036286286882007746 0.03016368097933735 3.078781662880007e-07 6.511621108748177 -0.1501944184607702 VSGRT(ph)SPPLLDR ddPTM_KYSE-520_SHP099_60min_R1 1 VSGRTSPPLLDR 12 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VS(0.022)GRT(0.489)S(0.489)PPLLDR 94.882 0.0058128 1338200000.0 1055800.0 1261000.0 1451800.0 634270.0 684970.0 738050.0 497110.0 460330.0 1443500.0 693340.0 True False 997232.6693148811 1200419.6672004112 1545385.3509621292 694550.8300997714 738873.2420538219 733443.556184253 547362.7301260692 458733.2226718297 1181396.7876737586 687197.5470103569 1.451158656856864 1.746833457748532 2.2488225659205363 1.0107003919344661 1.0751977291948718 1.067296528305563 0.7965143829563462 0.6675419967191996 1.719151636692256 1.0 19.390365361142656 -5.283041765689899 24.457414353946724 1.0256565239016493 1.8087277241668747 0.5542288635844617 0.31498061734721405 418.70356090215034 474039.56361420796 0.08815255834476561 0.13089643682832997 5.211445907123174e-06 5.283041765689899 0.7830712002652254 VSGRTS(ph)PPLLDR ddPTM_KYSE-520_SHP099_60min_R1 2 VSGRTSPPLLDR 12 1 Q9UQ35 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 VS(0.043)GRT(0.196)S(0.761)PPLLDR;VS(0.028)GRT(0.274)S(0.698)PPLLDR 89.48899999999999 0.0018673 3703400000.0 2044540.0 2266180.0 2538080.0 1210250.0 1395880.0 1332530.0 949030.0 912620.0 2688580.0 1463580.0 True False 1931125.290510554 2157309.3111944706 2701688.697871585 1325271.796125068 1505727.8145292322 1324213.1859930928 1044967.2140402376 909454.3342271087 2200401.6455863663 1450613.8198480082 1.3312469963321407 1.4871699701720118 1.8624451669395106 0.91359380283853 1.037993567913891 0.912864035813364 0.7203620975772358 0.6269444850059399 1.5168762460962346 1.0 20.4682320678163 -5.2790624579957415 24.796115860002487 0.9368360772613127 1.552975627422669 0.5378068129536037 0.25376035926841084 521.8100226277347 734198.7077293536 0.07132349520617953 0.10606546831401098 5.259416227359491e-06 5.2790624579957415 0.6161395501613562 VSGS(ph)PEQAVEENLSSYSLDR ddPTM_KYSE-520_SHP099_60min_R1 2 VSGSPEQAVEENLSSYSLDR 20 0 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 VS(0.011)GS(0.989)PEQAVEENLSSYSLDR;VS(0.002)GS(0.998)PEQAVEENLSSYSLDR 195.09 4.2448999999999994e-13 854770000.0 301460.0 289310.0 265270.0 275895.0 207000.0 329730.0 246540.0 268042.0 283550.0 271850.0 True False 284737.4128543889 275411.11333683686 282369.72864700673 302115.9778491432 223289.72233111112 327672.0327628665 271462.6691985295 267112.2248634734 232064.46771381676 269441.6204960997 1.0567684841344347 1.022155050989324 1.0479811104427876 1.1212669271097873 0.8287128095503098 1.2161151352918387 1.0075008779219359 0.9913547297246157 0.8612792162047437 1.0 18.03961319474509 -7.410516182658078 3.0720508503239787 0.930734763987903 1.043939272366562 0.172943883905052 0.09701317625134427 0.43978124827176185 7.750459307858674 0.06292455825472515 0.025156081230824325 3.885830183246921e-08 7.410516182658078 0.11320450837865892 VSGS(ph)PEQAVEENLSSYSLDRR ddPTM_KYSE-520_SHP099_60min_R1 8 VSGSPEQAVEENLSSYSLDRR 21 1 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91 A0A494BZT8 TACC3 Transforming acidic coiled-coil-containing protein 3 1 VS(0.069)GS(0.93)PEQAVEENLSSYSLDRR;VS(0.217)GS(0.781)PEQAVEENLS(0.001)S(0.001)YS(0.001)LDRR;VS(0.003)GS(0.997)PEQAVEENLSSYSLDRR;VS(0.056)GS(0.944)PEQAVEENLSSYSLDRR;VSGS(1)PEQAVEENLSSYSLDRR;VSGS(1)PEQAVEENLSSYSLDRR;VS(0.007)GS(0.993)PEQAVEENLSSYSLDRR;VS(0.029)GS(0.971)PEQAVEENLSSYSLDRR 259.8 1.2904e-35 5837890000.0 1699750.0 1626605.0 1509202.0 1517433.0 1436372.0 1475303.0 1378365.0 1426056.0 1838890.0 1362121.0 True False 1605461.4791323794 1548460.4542161198 1606487.5757285792 1661649.3760871317 1549406.3045612692 1466095.0867411385 1517703.5857460506 1421109.3445799742 1504993.9306445436 1350053.6676541015 1.189183450700951 1.146962147739487 1.1899434920391467 1.23080246059734 1.1476627497731773 1.0859531897636887 1.1241801878759852 1.0526317424472031 1.1147660027913346 1.0 20.36458532809619 -6.1480429475912475 2.9998767637108377 1.0806842952212945 1.1866781871782455 0.6710668856675206 0.03757216166093561 0.16945213136617135 2.9260451042776148 0.012940494079273423 0.012914315972391916 7.111431848826532e-07 6.1480429475912475 0.10599389195695097 VSGTLDT(ph)PEKTVDSQGPT(ph)PVCT(ph)PTFLER ddPTM_KYSE-520_SHP099_60min_R1 2 VSGTLDTPEKTVDSQGPTPVCTPTFLER 28 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 3 VS(0.007)GT(0.032)LDT(0.889)PEKT(0.073)VDSQGPT(0.999)PVCT(0.864)PT(0.137)FLER;VS(0.21)GT(0.245)LDT(0.543)PEKT(0.001)VDSQGPT(0.999)PVCT(0.98)PT(0.021)FLER 102.26 0.0049253 332520000.0 374480.0 332990.0 298329.0 251975.0 307570.0 308440.0 263374.0 268780.0 372200.0 288475.0 True False 353706.8478926273 316992.66057182034 317559.76468327665 275922.6282409537 331774.0091660857 306514.9115499914 289998.41420253704 267847.66491372354 304617.86239845783 285919.3359301539 1.2370861408933636 1.1086786402206013 1.1106620811432357 0.9650366154612144 1.1603762581735062 1.072032818462018 1.0142665352069073 0.9367945124884978 1.0653979081459244 1.0 18.125248663161553 -1.0000000000000018 0.425669501525148 1.0143126010939765 5.059969498058625 0.5303260458995536 0.059721735973840964 65.99571223255553 0.8383631728585307 0.04085718214736122 228.22856403080414 0.09999999999999959 1.0000000000000018 4.0456568969646485 VSGTLDT(ph)PEKTVDSQGPT(ph)PVCTPTFLER ddPTM_KYSE-520_SHP099_60min_R1 1 VSGTLDTPEKTVDSQGPTPVCTPTFLER 28 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 2 VS(0.001)GT(0.009)LDT(0.989)PEKT(0.001)VDS(0.039)QGPT(0.519)PVCT(0.439)PT(0.004)FLER 120.3 0.000221 431200000.0 510850.0 443690.0 376960.0 357140.0 425880.0 478710.0 383000.0 385060.0 501460.0 407450.0 True False 482512.13214577263 422374.46640773263 401259.44475732546 391082.478221944 459394.3330742688 475722.1933215423 421717.37771978945 383724.3167336799 410407.5047778893 403840.3099913037 1.1948092357500495 1.045894765722689 0.9936091936091426 0.9684087213343452 1.137564333496479 1.1779958106009438 1.0442676654266403 0.9501882482755202 1.0162618605030465 1.0 18.623425397295488 -7.007439874122762 24.877599887591945 0.9893806095792841 1.080107775236342 0.27597399166938985 0.07038492464580118 499.4066734795715 1669922.48477031 0.03334127118097823 0.021421394044607432 9.83014957034971e-08 7.007439874122762 0.09072716565705785 VSGTLDT(ph)PEKTVDSQGPTPVCT(ph)PTFLER ddPTM_KYSE-520_SHP099_60min_R1 3 VSGTLDTPEKTVDSQGPTPVCTPTFLER 28 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 2 VS(0.012)GT(0.014)LDT(0.877)PEKT(0.097)VDS(0.002)QGPT(0.015)PVCT(0.932)PT(0.052)FLER;VSGT(0.001)LDT(0.986)PEKT(0.013)VDSQGPT(0.251)PVCT(0.662)PT(0.086)FLER;VS(0.063)GT(0.077)LDT(0.809)PEKT(0.047)VDS(0.011)QGPT(0.062)PVCT(0.74)PT(0.19)FLER 125.96 0.0001311 827237000.0 922440.0 787970.0 722500.0 677700.0 827110.0 814460.0 730100.0 693050.0 944900.0 763390.0 True False 871270.4143614487 750114.7384329176 769073.5060408734 742108.4042420645 892198.8513878522 809376.6530314024 803905.633089341 690645.9713090856 773329.9789906035 756626.9585084325 1.1515191265177984 0.9913930900792213 1.0164500450221563 0.9808114763780172 1.1791793054092041 1.0697169112596217 1.0624861089725255 0.9127958811705339 1.0220756348876312 1.0 19.52922265475424 -7.227966599481697 23.461290746673352 0.9755768237827608 1.0612392214249515 0.2688608471778817 0.0649515243603824 398.99281659957035 279656.9252395951 0.031036883665466055 0.017917000744298535 5.916071314724006e-08 7.227966599481697 0.08566239764219075 VSGTLDT(ph)PEKTVDSQGPTPVCTPTFLER ddPTM_KYSE-520_SHP099_60min_R1 4 VSGTLDTPEKTVDSQGPTPVCTPTFLER 28 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 VSGTLDT(0.999)PEKT(0.001)VDSQGPTPVCTPTFLER;VS(0.014)GT(0.014)LDT(0.968)PEKT(0.004)VDSQGPTPVCTPTFLER;VSGTLDT(1)PEKTVDSQGPTPVCTPTFLER;VSGTLDT(1)PEKTVDSQGPTPVCTPTFLER 379.09 3.779799999999999e-94 18492900000.0 4194900.0 5440900.0 4335070.0 3262890.0 3515520.0 4738670.0 3545710.0 4524360.0 5280460.0 4770520.0 True False 3962200.534674173 5179510.997042597 4614515.5485572405 3572994.0845763474 3792171.4234273806 4709094.202809616 3904144.9695948614 4508666.051153564 4321661.573564103 4728256.904208396 0.8379833445910284 1.095437727258974 0.9759443367914464 0.7556683481805305 0.8020231345830955 0.9959471953857406 0.8257049159321205 0.9535577576465051 0.9140073522057565 1.0 22.17287699408629 -9.904299916614086 18.500582611518514 0.999999999904743 0.9080325217880724 0.07608158951661692 0.09783021755753872 0.0 0.0 0.09820202209707052 0.023817488809144787 1.246522389112617e-10 9.904299916614086 -0.09196747811667061 VSGTLDTPEKT(ph)VDSQGPTPVCTPTFLER ddPTM_KYSE-520_SHP099_60min_R1 2 VSGTLDTPEKTVDSQGPTPVCTPTFLER 28 1 H7BZL0;Q9BYG3;C9J808 H7BZL0 NIFK MKI67 FHA domain-interacting nucleolar phosphoprotein 1 VSGT(0.001)LDT(0.128)PEKT(0.871)VDSQGPTPVCTPTFLER;VSGT(0.002)LDT(0.421)PEKT(0.572)VDS(0.005)QGPTPVCTPTFLER 113.65 0.0001933 1107150000.0 1134770.0 1417040.0 1098930.0 906510.0 969890.0 1255470.0 866780.0 1184030.0 1440600.0 1220490.0 True False 1071822.0459920866 1348963.2713795977 1169768.7861501682 992664.4378478302 1046214.8250807782 1247634.1460370491 954402.5813575955 1179922.8762846803 1179023.354570708 1209677.408126851 0.8860395662441698 1.1151429813576716 0.9670088721930583 0.8206026095708782 0.8648709300943384 1.031377570297004 0.7889728079120358 0.9754029201155002 0.9746593154917145 1.0 20.20619093604237 -5.002686815776127 24.9979572933902 0.9159959269542116 1.0107124384007518 0.10653514602528369 0.09035362656281766 192.13703540676974 1787702.200835988 0.022910982027662077 0.04635792611625059 9.938324757880685e-06 5.002686815776127 0.09471651144654014 VSHLLGINVTDFTR ddPTM_KYSE-520_SHP099_60min_R1 3 VSHLLGINVTDFTR 14 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 ;; 154.69 3.5836e-05 225630000.0 332470.0 315456.0 268642.0 289611.0 385190.0 364354.0 254758.0 271138.0 251939.0 202104.0 False True 314027.2263374864 300301.02025089075 285959.0931623975 317135.5423652782 415502.2615686991 362079.9315357462 280511.4248384806 270197.4855620848 206193.22846535477 200313.51579453255 1.5676786715659934 1.4991550573098538 1.4275576564474768 1.583195927181336 2.0742597418882704 1.8075661549824837 1.4003619462513424 1.3488729629169622 1.0293525509125065 1.0 17.6119002421271 -7.437901769204276 1.6364725210925708 1.0034721927488355 1.648421384152595 0.6529361085527655 0.18048022145912104 0.2789518758171531 1.3237725026113265 0.1767483217285625 0.060612548053995255 3.648364580427336e-08 7.437901769204276 0.6449491914037595 VSHS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 6 VSHSPPPK 8 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 VS(0.007)HS(0.993)PPPK;VS(0.052)HS(0.948)PPPK;VS(0.001)HS(0.999)PPPK;VS(0.064)HS(0.936)PPPK;VS(0.296)HS(0.704)PPPK;VS(0.001)HS(0.999)PPPK 111.06 0.0010780999999999998 40829700000.0 3257430.0 3097070.0 2994090.0 2764620.0 2823980.0 2884360.0 2765490.0 2921750.0 3411050.0 2918940.0 True False 3076733.8643742814 2948282.108403157 3187093.832113378 3027368.653586686 3046211.1597517463 2866357.639340985 3045052.7177814604 2911615.1311915745 2791689.305572966 2893080.4625009536 1.063480226095947 1.019080577473633 1.1016264059791347 1.0464170260130428 1.0529299821541835 0.9907631939358964 1.052529563989082 1.0064065514011313 0.9649539104625044 1.0 21.464175017457514 -6.766610109841162 0.7619816148815071 0.9868687941788635 1.0590463108237023 0.48311722865771656 0.02775188519247734 0.605516251066751 0.6918664003920707 0.023112324147518678 0.014285699974444495 1.7115511796592636e-07 6.766610109841162 0.07217751664483874 VSIGNITLS(ph)PAISR ddPTM_KYSE-520_SHP099_60min_R1 6 VSIGNITLSPAISR 14 0 Q0JRZ9-3;Q0JRZ9 Q0JRZ9-3 FCHO2 F-BAR domain only protein 2 1 VSIGNITLS(1)PAISR;VSIGNITLS(1)PAISR;VSIGNITLS(1)PAISR;VSIGNITLS(1)PAISR;VSIGNIT(0.001)LS(0.999)PAISR;VSIGNITLS(1)PAISR 292.81 7.354899999999999e-33 8493980000.0 2980939.0 3238255.0 2650161.0 2349757.0 2148432.0 3349584.0 2303221.0 3134391.0 3241763.0 2983286.0 True False 2815580.371315427 3082684.369080148 2820994.6184675274 2573077.1987997955 2317501.3754940736 3328678.0037909066 2536053.0559507846 3123518.5291933618 2653140.5573949763 2956856.4070013836 0.9522208669479396 1.0425546407261521 0.954051949153785 0.8702070187470525 0.7837720391178229 1.1257489528098512 0.8576855642857052 1.056364631639652 0.8972842073469464 1.0 21.495632753283907 -7.272793469408734 24.833838687873584 0.9826182876999764 0.9436560618461429 0.04000800558855977 0.09720664916111908 3201.1193318448313 7001488.493278772 0.052296286912064734 0.025494386127930792 5.335885854864468e-08 7.272793469408734 -0.038962225853833465 VSILPDVVFDS(ph)PLH ddPTM_KYSE-520_SHP099_60min_R1 6 VSILPDVVFDSPLH 14 0 Q9UMX1 Q9UMX1 SUFU Suppressor of fused homolog 1 VSILPDVVFDS(1)PLH;VSILPDVVFDS(1)PLH;VSILPDVVFDS(1)PLH;VSILPDVVFDS(1)PLH;VSILPDVVFDS(1)PLH;VSILPDVVFDS(1)PLH 243.7 1.5882e-18 253369000.0 379273.0 400741.0 340969.0 291376.0 292757.0 411398.0 287660.0 342407.0 440046.0 387179.0 True False 358233.97062801925 381488.800835496 362948.4073096891 319068.28743461083 315795.3103405265 408830.3124816604 316739.4800910565 341219.2700353949 360144.7390569363 383748.89528070367 0.933511405592397 0.9941104861199549 0.9457966179790577 0.8314506995550295 0.8229217444639921 1.0653589300435906 0.825382128746895 0.8891732959538572 0.9384906210439994 1.0 18.549803071759122 -5.013840239762335 24.00276861978042 0.9037852164069603 0.9653466164413719 0.07562531341537282 0.07519334496947876 838.0866363311706 1453484.4226703737 0.01993805899329747 0.03654184831208798 9.686341139689844e-06 5.013840239762335 0.06156140003441157 VSIPT(ph)KALELKDMQT(ph)FK ddPTM_KYSE-520_SHP099_60min_R1 1 VSIPTKALELKDMQTFK 17 2 R4GNA2;Q5W026;Q9BXX3 R4GNA2 ANKRD30A Ankyrin repeat domain-containing protein 30A 2 VS(0.112)IPT(0.888)KALELKDMQT(1)FK 62.378 0.031389 415870000.0 1145900.0 1045200.0 915330.0 960790.0 990410.0 912920.0 936390.0 968400.0 1288400.0 911840.0 True False 1082334.6427049825 994987.0231228156 974333.6363797821 1052103.192727954 1068349.6323379504 907222.1276495206 1031049.439485725 965040.84642626 1054459.0379209367 903761.8070007844 1.1975883848165794 1.1009394460082025 1.0780867578518245 1.1641377015249779 1.1821141633362064 1.0038287971697095 1.1408420133479154 1.0678044136749212 1.1667444118049808 1.0 19.785583064401216 -6.232548024341105 24.99892781001857 1.0841440434287184 1.139542397133778 0.24527363517717593 0.05906677163296875 1294.6397640889058 1120217.7894727862 0.01904027156707794 0.01903797384564367 5.853989992427588e-07 6.232548024341105 0.05539835370505952 VSISEGDDKIEYR ddPTM_KYSE-520_SHP099_60min_R1 3 VSISEGDDKIEYR 13 1 M0R2U2;M0R1H0;M0R2B0;M0R0P1;M0R299;M0QXL5;M0R2Q4;P22087 M0R2U2 FBL rRNA 2-O-methyltransferase fibrillarin 0 ;; 210.91 4.0774999999999996e-11 3266690000.0 5465000.0 5141300.0 3633570.0 3836390.0 5281400.0 5251600.0 4069210.0 4581350.0 4640300.0 4627100.0 False True 5161845.555792586 4894304.230751374 3867795.7361175586 4200999.352147289 5697016.132944589 5218822.816417886 4480565.458462511 4565458.366145129 3797738.492443745 4586107.493829324 1.1255395916336297 1.0672022488214097 0.8433722369834845 0.9160272317645838 1.242233449741422 1.137963474131361 0.9769865761958652 0.9954974610359704 0.8280962662898022 1.0 22.128838739985795 -7.303225192362829 2.410394474942845 0.9200358093055521 1.0465793779638564 0.16441053648871795 0.11486678270675792 0.6229451899168907 6.911661139522727 0.08604506646118944 0.0355270329697849 4.974790629682967e-08 7.303225192362829 0.1265435686583043 VSITEAMHR ddPTM_KYSE-520_SHP099_60min_R1 1 VSITEAMHR 9 0 Q15149;Q15149-2;Q15149-3;Q15149-6;Q15149-5;Q15149-9;Q15149-8;Q15149-7;H0YDN1;Q15149-4 Q15149;Q15149-4 PLEC Plectin 0 92.051 0.0028477 0.0 48528.0 46259.0 46520.0 46760.0 46055.0 46984.0 40000.0 48202.0 51768.0 44287.0 False True 45836.05510183036 44036.64820382541 49518.75363463175 51204.05634109338 49679.26648289523 46690.75542817012 44043.590362380026 48034.798512431385 42368.23616508156 43894.65163476464 1.0442287020117988 1.0032349401071066 1.128127272695173 1.166521533583369 1.1317840473199967 1.063700329978037 1.0033930951054053 1.0943200759882041 0.9652254793503325 1.0 15.421757544137728 -6.544634552318803 5.632624228683701 1.0243055293136931 1.095868251227603 0.3266408466602245 0.052919884915549345 0.25101288145145684 24.705807230193056 0.021989266862703753 0.01735687318542918 2.853418335997915e-07 6.544634552318803 0.07156272191390989 VSKEEEEKER ddPTM_KYSE-520_SHP099_60min_R1 4 VSKEEEEKER 10 2 P23921;E9PL69 P23921 RRM1 Ribonucleoside-diphosphate reductase large subunit 0 ;;; 68.069 0.017493 3348862100.0 2890725.0 2723057.0 1935248.0 1781776.0 2745587.0 2776591.0 1839119.0 2362530.0 2687363.0 2087025.0 False True 2730370.7217325773 2592237.2543281144 2059997.1825862806 1951115.4553295127 2961649.0766469017 2759261.265644863 2025035.0965917525 2354334.934848647 2199405.6221082895 2068535.5821808795 1.3199534710705425 1.2531750851465124 0.9958722491079429 0.9432351428407292 1.4317612431517388 1.333920136261685 0.9789703953058114 1.1381650647587345 1.063266999637218 1.0 20.98017834381498 -6.774832892358599 24.996136244159928 1.056614383460884 1.2026270950001328 0.23868214831300016 0.1456095018917044 454.2614682024308 847774.1550793947 0.06672169599196101 0.04527382106306279 1.6794501118945874e-07 6.774832892358599 0.14601271153924866 VSKS(ph)PS(ph)PASTSTVPNMTDAPTAPK ddPTM_KYSE-520_SHP099_60min_R1 1 VSKSPSPASTSTVPNMTDAPTAPK 24 1 Q659A1 Q659A1 ICE2 Little elongation complex subunit 2 2 VS(0.384)KS(0.453)PS(0.406)PAS(0.17)T(0.184)S(0.201)T(0.203)VPNMTDAPTAPK 66.87899999999999 0.011973000000000001 0.0 256220.0 231800.0 211970.0 205330.0 213170.0 201820.0 176030.0 207880.0 279460.0 217670.0 True False 242006.965838093 220663.98006110667 225633.92536399132 224844.50146528435 229945.26622861312 200560.36651867235 193824.83028724414 207158.9127995567 228717.10861330706 215741.6131446976 1.1217444901358888 1.0228160290667134 1.0458525922519128 1.0421934748141586 1.0658364090120582 0.929632274438204 0.8984118893986675 0.9602176871673594 1.060143684287309 1.0 17.718944950829524 -6.252580402699876 24.908618910676733 0.9627403861498007 1.055899508693352 0.4761998098709702 0.04683371227400401 562.1266730991915 1580522.062107204 0.016098927618424567 0.015863347988872498 5.59010026195333e-07 6.252580402699876 0.0931591225435513 VSLDVNHFAPDELTVK ddPTM_KYSE-520_SHP099_60min_R1 1 VSLDVNHFAPDELTVK 16 0 P04792;F8WE04 P04792 HSPB1 Heat shock protein beta-1 0 88.133 0.0038220999999999997 308880000.0 293440.0 334800.0 252610.0 272850.0 300930.0 291940.0 207420.0 302050.0 312210.0 256360.0 False True 277162.29824186256 318715.705454955 268893.6447902908 298781.5819646561 324611.47894251836 290117.89417035587 228388.03782412174 301002.25904899975 255520.53417362258 254088.8498450617 1.090808582945968 1.2543474680187716 1.0582662126034132 1.175894110059718 1.2775510579880225 1.141797030240658 0.8988510828530579 1.1846338760340918 1.0056345814837364 1.0 17.954973541578628 -6.543728184791745 24.98537969969095 1.035188560776037 1.1739229263129107 0.38263123229619467 0.08973780378890112 263.5897716162749 315875.6772323603 0.033091595657609454 0.025635319598413638 2.859379605227623e-07 6.543728184791745 0.1387343655368738 VSLEPHQGPGT(ph)PESK ddPTM_KYSE-520_SHP099_60min_R1 4 VSLEPHQGPGTPESK 15 0 A0A087WY61;Q14980-2;Q14980;Q14980-5;H0YFY6 A0A087WY61;H0YFY6 NUMA1 Nuclear mitotic apparatus protein 1 1 VSLEPHQGPGT(0.991)PES(0.009)K;VSLEPHQGPGT(0.997)PES(0.003)K;VSLEPHQGPGT(0.998)PES(0.002)K;VSLEPHQGPGT(0.999)PES(0.001)K 150.76 1.7788e-05 936690000.0 600524.0 812820.0 836350.0 1471270.0 564679.0 671370.0 527921.0 566342.0 744710.0 641866.0 True False 567211.736605085 773770.9071323073 890262.4592073145 1611099.0584465466 609116.0247159872 667179.7307979431 581288.4066924516 564377.4917872165 609489.4366113794 636179.5666041911 0.8915906237491348 1.2162775224966016 1.39938864110234 2.5324596120656553 0.9574592720217908 1.048728638612562 0.9137175055704188 0.8871355218146336 0.9580462319227279 1.0 19.279074509262657 VSLLGPVT(ph)TPEHQLLK ddPTM_KYSE-520_SHP099_60min_R1 1 VSLLGPVTTPEHQLLK 16 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 VSLLGPVT(0.923)T(0.077)PEHQLLK 125.96 7.9758e-05 135970000.0 249060.0 321450.0 224880.0 318060.0 249370.0 301710.0 229160.0 243720.0 294530.0 257900.0 True False 235244.14531119892 306007.05949371296 239376.12462072168 348288.3267717737 268994.00027878827 299826.91597635805 252325.72918607548 242874.59220467575 241050.77649709204 255615.2066431636 0.9203057533255348 1.1971394953857182 0.9364705948613161 1.3625493230454826 1.0523395842184824 1.1729619685534343 0.987131135505251 0.9501570559678257 0.9430220512412496 1.0 17.9636141397362 -6.873695347484319 6.067188950572885 0.961968731518102 1.1120894521696698 0.23456927101522973 0.12122451210590801 0.2930080345979418 14.478121895224932 0.04883821691611896 0.03276859831675335 1.3375334516549422e-07 6.873695347484319 0.15012072065156778 VSLLGPVT(ph)TPEHQLLKT(ph)PS(ph)SSSLSQR ddPTM_KYSE-520_SHP099_60min_R1 1 VSLLGPVTTPEHQLLKTPSSSSLSQR 26 1 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 3 VSLLGPVT(0.5)T(0.5)PEHQLLKT(0.984)PS(0.502)S(0.366)S(0.077)S(0.07)LS(0.001)QR 96.492 0.0035935000000000003 709260000.0 251850.0 255190.0 243980.0 251080.0 198380.0 202220.0 204730.0 211960.0 300860.0 203930.0 True False 237879.3784494717 242930.2893520011 259707.34118180265 274942.56771004526 213991.37737220165 200957.86997029983 225426.10637225144 211224.76023183588 246231.4080634068 202123.3388551391 1.176902082643503 1.2018913339152197 1.2848953646463053 1.3602712545090865 1.0587168141209478 0.9942338727855937 1.1152898405948724 1.045029047255249 1.2182235335023817 1.0 17.624876391436672 -5.780902765737206 24.99983270591656 1.072451553226514 1.254190488143464 0.5908717879907855 0.07503139807730168 175.27255076240718 225128.59603942296 0.0237716777661549 0.02699270282458704 1.6561407155805838e-06 5.780902765737206 0.18173893491695003 VSLLGPVTT(ph)PEHQLLK ddPTM_KYSE-520_SHP099_60min_R1 3 VSLLGPVTTPEHQLLK 16 0 Q9H0H5 Q9H0H5 RACGAP1 Rac GTPase-activating protein 1 1 VSLLGPVT(0.134)T(0.866)PEHQLLK;VSLLGPVT(0.003)T(0.997)PEHQLLK;VSLLGPVT(0.067)T(0.933)PEHQLLK 250.1 2.3434999999999997e-23 2035100000.0 1315944.0 1640439.0 1160189.0 1072753.0 1086809.0 1412321.0 1079653.0 1223652.0 1439264.0 1514764.0 True False 1242945.9630506714 1561629.8480908624 1234976.6393080351 1174707.1225850491 1172334.6852026682 1403506.180765124 1188794.8616378678 1219407.4368145242 1177929.93849289 1501344.369428558 0.8278886499063247 1.0401543309382446 0.8225805247986457 0.7824368256246009 0.7808566169591606 0.9348329466205857 0.7918202418079119 0.8122103506996569 0.7845834456629254 1.0 20.51782350103537 -4.824677388732502 24.999990789176145 0.8296468708720198 0.934025170364303 0.16362849474881858 0.08428376441145527 82.43281727121165 32587.53888098689 0.02066843618999432 0.04302481733477437 1.4973475325546288e-05 4.824677388732502 0.10437829949228317 VSMPDVELNLKS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 VSMPDVELNLKSPK 14 1 Q09666 Q09666 AHNAK Neuroblast differentiation-associated protein AHNAK 1 VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK;VSMPDVELNLKS(1)PK 266.45 1.3641e-24 20871580000.0 9873811.0 9437171.0 8518703.0 8953993.0 8851651.0 13264440.0 13953050.0 18341620.0 20882930.0 16492850.0 True False 9326091.020875746 8983795.13967754 9067832.225786729 9804977.80260385 9548225.57469517 13181651.7097658 15363560.462645166 18277997.201186273 17091116.3278254 16346736.180243133 0.5705170082910725 0.5495773003625926 0.554718209543641 0.5998125677500239 0.584105932182063 0.806378200787097 0.9398549223063718 1.1181435241658384 1.0455369279454045 1.0 23.96249927751166 -6.5829909391581864 1.5704014769335892 1.062032920330059 0.5623040058982824 0.9732285012091872 0.035771594950712325 0.05269190133751597 0.2643501177932925 0.017714467862070468 0.012461778466227052 2.6122158534285806e-07 6.5829909391581864 -0.49972891443177647 VSNLQVS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 VSNLQVSPK 9 0 O00443;A0A0C4DGF9;O00443-2 O00443 PIK3C2A Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha 1 VSNLQVS(1)PK;VSNLQVS(1)PK;VSNLQVS(1)PK;VSNLQVS(1)PK;VSNLQVS(1)PK;VSNLQVS(1)PK 193.49 4.0154000000000006e-06 15307980000.0 17607290.0 17332300.0 14031060.0 13084480.0 14161500.0 17348100.0 16341180.0 19811100.0 22282750.0 19559150.0 True False 16630578.52443757 16499630.291687308 14935524.578089746 14328025.045207642 15275929.482087074 17239824.072949063 17993105.948947944 19742379.918045513 18236764.302415986 19385871.147788413 0.8578710957920932 0.8511162674043475 0.770433500987838 0.7390962694416865 0.7879929339069082 0.8892983937384636 0.9281556558267252 1.0183901341105206 0.9407245185624006 1.0 24.208502231508792 -6.6367971292830585 1.9525444394015008 0.9818957491138112 0.7993662820371517 0.8057390761114737 0.039732134569064145 0.15319196524586493 1.1914354315580498 0.020777278463337993 0.01454664111108007 2.307824984532763e-07 6.6367971292830585 -0.1825294670766595 VSNQDS(ph)KSPLGFYCDQNPVESSMCQSNSR ddPTM_KYSE-520_SHP099_60min_R1 1 VSNQDSKSPLGFYCDQNPVESSMCQSNSR 29 1 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.001)NQDS(0.57)KS(0.429)PLGFYCDQNPVESSMCQSNSR 157.74 6.5986e-08 574050000.0 273390.0 269350.0 228010.0 209790.0 214490.0 252590.0 198220.0 268300.0 329350.0 220840.0 True False 258224.51171054685 256410.02169740762 242707.8894288987 229728.3785243365 231369.1427188405 251013.4921164969 218258.01204077425 267369.32992169063 269548.34223786124 218883.52941091993 1.1797347767806243 1.1714450255233115 1.108844918948891 1.049546209084819 1.0570422696560269 1.146790225797474 0.9971422364586813 1.2215141570553996 1.2314692794076159 1.0 17.739803872851564 -10.82754270194318 11.662224376524897 0.9987839555898143 1.124791539372445 0.2182977349003412 0.07294869211734127 0.002444618538845254 3.615023513091668e-05 0.07486238542456061 0.018000701276779208 1.4875011085538625e-11 10.82754270194318 0.12600758378263077 VSNQDSKS(ph)PLGFYCDQNPVESSMCQSNSR ddPTM_KYSE-520_SHP099_60min_R1 2 VSNQDSKSPLGFYCDQNPVESSMCQSNSR 29 1 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VSNQDS(0.291)KS(0.709)PLGFYCDQNPVESSMCQSNSR;VSNQDS(0.067)KS(0.933)PLGFYCDQNPVESSMCQSNSR 312.02 7.954499999999998e-65 1963480000.0 1518440.0 1590300.0 1298550.0 1055560.0 1103190.0 1351050.0 1158550.0 1218430.0 1736290.0 1356050.0 True False 1434209.1062649048 1513899.600911036 1382256.6107534613 1155880.1050343127 1190004.7767075296 1342617.595803447 1275667.540358386 1214203.5507137005 1421023.5043090214 1344036.4519909366 1.0670909290744268 1.1263828437602856 1.0284368468622325 0.860006514943917 0.8853962070334936 0.9989443320637712 0.9491316537350791 0.9034007588968936 1.0572804794126254 1.0 20.35814083570975 -5.013770971808398 6.451335980019208 0.9454494703404466 1.0930338126803456 0.5147755583882856 0.05730618432275462 0.11036547492000437 20.917935301059096 0.015422140780124471 0.029295553172584567 9.687886189350008e-06 5.013770971808398 0.14758434233989903 VSNS(ph)PEPQK ddPTM_KYSE-520_SHP099_60min_R1 7 VSNSPEPQK 9 0 O60271;O60271-3;D6RHI8 O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VS(0.121)NS(0.879)PEPQK;VSNS(1)PEPQK;VSNS(1)PEPQK;VSNS(1)PEPQK;VSNS(1)PEPQK;VSNS(1)PEPQK;VSNS(1)PEPQK 202.2 1.5650999999999998e-06 8008570000.0 19952060.0 18932230.0 16373440.0 15006520.0 16031280.0 19000290.0 16665090.0 18288380.0 20093700.0 18241090.0 True False 18845279.45835446 18022697.252943434 17428898.14083027 16432735.148925226 17292850.53049418 18881702.142310306 18349759.93280489 18224941.87831998 16445190.600956166 18079488.133953284 1.0423569140192093 0.9968588225181444 0.964015021426342 0.9089159508926884 0.9564900511767366 1.0443715000343656 1.0149490846670617 1.008045235754962 0.9096048781421026 1.0 24.10785049699446 VSNS(ph)PPLGR ddPTM_KYSE-520_SHP099_60min_R1 1 VSNSPPLGR 9 0 H0Y9Y2 H0Y9Y2 BOD1L1 1 VS(0.002)NS(0.998)PPLGR 116.6 0.00082816 326630000.0 194990.0 204210.0 214420.0 187490.0 193410.0 216880.0 176030.0 213920.0 278090.0 223770.0 True False 184173.51599707184 194399.44507454088 228241.85628413013 205308.99322907627 208630.26664763366 215526.371472449 193824.83028724414 213177.96144930358 227595.8660784178 221787.5718904258 0.8304050331912322 0.8765118956736853 1.0291011995789063 0.9257010727837771 0.9406760932064646 0.9717693811036889 0.8739210616499438 0.9611808255632295 1.0261885467183056 1.0 17.758818999204227 -4.573836585614571 7.192660756551378 0.9591559427275068 0.8414502325605983 0.5092169374965247 0.044809965493432545 0.14869949488097245 16.9294612977301 0.011428411427757171 0.030958046115260585 2.667862326988196e-05 4.573836585614571 -0.11770571016690856 VSPAS(ph)PAGS(ph)PSADFAVHGESLGDR ddPTM_KYSE-520_SHP099_60min_R1 1 VSPASPAGSPSADFAVHGESLGDR 24 0 Q96C92-4;A0A0A0MRP9;Q96C92-3;Q96C92-2;Q96C92 Q96C92-4 SDCCAG3 Serologically defined colon cancer antigen 3 2 VS(0.035)PAS(0.961)PAGS(0.834)PS(0.17)ADFAVHGESLGDR 109.53 1.2742e-08 0.0 95198.0 113420.0 105530.0 118510.0 88804.0 110710.0 106300.0 96642.0 92938.0 101370.0 True False 89917.17716749194 107971.13295310919 112332.63265396992 129773.15476866919 95792.36957435745 110019.01782421055 117045.84138802509 96306.77145841243 76062.8019763241 100471.9406646667 0.8949481474394713 1.0746396679394463 1.1180497949063137 1.2916357931394764 0.9534240997103092 1.0950223226145097 1.1649604915931218 0.9585439558676799 0.7570551685688037 1.0 16.616433122944585 -7.489434054570902 6.116351958790965 0.8708726088292519 1.087685216904321 0.34903503289436744 0.11558774042990311 0.18398067668255363 21.60376493792205 0.0677926378103845 0.030148785730675438 3.240156188389647e-08 7.489434054570902 0.21681260807506908 VSPKS(ph)PPTDQK ddPTM_KYSE-520_SHP099_60min_R1 5 VSPKSPPTDQK 11 1 Q9BY89 Q9BY89 KIAA1671 Uncharacterized protein KIAA1671 1 VS(0.002)PKS(0.998)PPTDQK;VS(0.001)PKS(0.998)PPTDQK;VS(0.002)PKS(0.998)PPTDQK;VS(0.003)PKS(0.977)PPT(0.021)DQK;VS(0.085)PKS(0.908)PPT(0.007)DQK 136.99 0.00016915 2234850000.0 3554570.0 3503420.0 2930380.0 2926690.0 2681470.0 3332860.0 2506550.0 2840300.0 4105360.0 3287800.0 True False 3357390.9162403787 3335110.4444593727 3119276.9835737767 3204841.7376585654 2892486.433522724 3312058.384478357 2759936.5355705908 2830447.662231004 3359930.111703735 3258672.649869691 1.030294011389771 1.0234567269568295 0.9572231760371853 0.9834807242104302 0.8876271857617825 1.016382662619027 0.8469511460996109 0.8685891362374766 1.0310732229695097 1.0 21.635853002674168 -4.827409019471291 1.1605447086555252 0.9351248789448096 1.0452609177725614 0.19803122900496517 0.06042524046801909 1.0341575617105756 2.158200691203527 0.019780709380566527 0.11051226955718038 1.4879590545824802e-05 4.827409019471291 0.1101360388277518 VSPPAPGS(ph)APET(ph)PEDK ddPTM_KYSE-520_SHP099_60min_R1 2 VSPPAPGSAPETPEDK 16 0 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 2 VSPPAPGS(1)APET(1)PEDK;VSPPAPGS(1)APET(1)PEDK 178.14 3.4266000000000004e-08 447370000.0 853360.0 714560.0 652740.0 719130.0 736370.0 755970.0 689630.0 768610.0 909250.0 760280.0 True False 806022.4196690146 680231.4650235736 694816.6648209272 787475.8989856819 794318.1296278279 751251.7108171665 759344.5305402032 765943.8713049218 744153.120327236 753544.5106888894 1.0696414189682704 0.902709070764389 0.9220645296529686 1.045029043162656 1.054109104851236 0.9969573132851477 1.0076969837468677 1.0164547156009363 0.9875370462813566 1.0 19.523333206503494 -5.2663363005565245 24.95584627181032 1.016607113709667 0.958595412981757 0.203154744259042 0.0453757701294296 567.0708895752713 2889928.4268950885 0.012639221885721254 0.019476694200715607 5.4158134870005355e-06 5.2663363005565245 -0.058011700727910065 VSPPAPGS(ph)APETPEDK ddPTM_KYSE-520_SHP099_60min_R1 2 VSPPAPGSAPETPEDK 16 0 M0R0P8;Q13459-2;Q13459;M0R300 M0R0P8 MYO9B Unconventional myosin-IXb 1 VSPPAPGS(1)APETPEDK;VSPPAPGS(1)APETPEDK 237.06 6.3224e-18 0.0 260850.0 295440.0 244530.0 175944.0 238080.0 248180.0 189347.0 233220.0 328010.0 229370.0 True False 246380.1305084165 281246.61893551896 260292.79506183355 192665.66486050744 256815.5415101008 246631.01656230327 208488.04260863943 232411.0142539574 268451.6524592102 227337.96024715953 1.0837615074955125 1.2371300359594608 1.1449596661237122 0.847485675735998 1.1296641406956125 1.0848650893769283 0.917084161316365 1.02231503265571 1.1808483377230634 1.0 17.794479075828896 -5.02840741668105 24.94708998877705 1.0266600329500737 1.1680956025244231 0.2709661655226884 0.09720579151015296 810.8064881171865 712041.587525455 0.025974662987223267 0.045115869521571525 9.366828815768751e-06 5.02840741668105 0.14143556957434944 VSPS(ph)KSPSLSPSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.02)PS(0.47)KS(0.488)PS(0.022)LS(0.001)PS(0.154)PPS(0.845)PLEK 110.17 3.2868000000000004e-05 3683200000.0 1452000.0 1385200.0 1342000.0 1272200.0 1290800.0 1254200.0 1194500.0 1406100.0 1717200.0 1482700.0 True False 1371454.6655097627 1318652.912772411 1428507.4672759187 1393109.505499124 1392378.6163526466 1246372.0725781326 1315251.717196575 1401222.567286208 1405399.7670892829 1469564.4315231445 0.9332388809167795 0.8973086749287204 0.9720618141222486 0.947974430801392 0.9474770799327948 0.8481234615118699 0.8949942506660762 0.9534951562715064 0.9563376310303335 1.0 20.486957183162776 -7.897092245853651 1.8179052477486755 0.9972495865993891 0.9215254236575523 0.34314674026591596 0.03370168226669201 0.4047857442523422 2.9103278534541785 0.03465754005209016 0.009979551020390467 1.2673826402161295e-08 7.897092245853651 -0.07572416294183681 VSPS(ph)PTTYR ddPTM_KYSE-520_SHP099_60min_R1 1 VSPSPTTYR 9 0 P11274;P11274-2 P11274 BCR Breakpoint cluster region protein 1 VS(0.184)PS(0.739)PT(0.063)T(0.013)Y(0.001)R 73.248 0.022368 945350000.0 2384200.0 2209000.0 2187200.0 2244100.0 2368900.0 2209100.0 2080500.0 2177600.0 2657700.0 2265600.0 True False 2251943.6732151303 2102876.324223399 2328190.4116437333 2457378.589286735 2555318.9528027484 2195312.187475961 2290817.2437232947 2170046.4138556635 2175128.6751649138 2245528.5466101305 1.0028568448237651 0.9364727637944837 1.0368117631630156 1.0943430636837883 1.137958792223007 0.9776371762407668 1.0201683907254409 0.9663855830875918 0.9686488637378968 1.0 21.098623632029987 -9.165626597034509 8.508285133133652 1.0000005859515957 1.0174596252165184 0.005642797070654959 0.05844821946796611 0.0 0.0 0.062393839058469264 0.015132728754462211 6.829256158409598e-10 9.165626597034509 0.01745903926492276 VSPS(ph)TSYTPSR ddPTM_KYSE-520_SHP099_60min_R1 1 VSPSTSYTPSR 11 0 Q9BTE3;Q9BTE3-2 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VS(0.315)PS(0.674)T(0.005)S(0.005)Y(0.001)TPSR 113.95 0.014166 0.0 2832100.0 2758100.0 2644400.0 2120100.0 2415100.0 2379200.0 2365000.0 2694800.0 2944800.0 2525500.0 True False 2674997.7673486155 2625596.736007498 2814862.255189599 2321593.6665686932 2605154.6299607074 2364350.5302805724 2604077.2801757175 2685452.367771046 2410098.552366945 2503126.0348092704 1.0686628360495005 1.0489271013505157 1.124538763148649 0.9274777355530125 1.0407604706005988 0.9445591222340219 1.0403300688669235 1.0728394537175865 0.9628354780587731 1.0 21.255299503265555 -5.247655558589975 24.997684430755736 1.002704001348823 1.0775313157160633 0.39521850589244933 0.04639631821200682 892.1621835906326 1617981.1548019643 0.012378703996126044 0.02131032248808988 5.653852072467289e-06 5.247655558589975 0.07482731436724022 VSPSKS(ph)PSLS(ph)PSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 2 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 3 VS(0.001)PS(0.043)KS(0.925)PS(0.032)LS(0.975)PS(0.049)PPS(0.974)PLEK;VSPS(0.029)KS(0.932)PS(0.04)LS(0.998)PS(0.033)PPS(0.967)PLEK 117.53 0.00031974 2010760000.0 2780900.0 2492500.0 2166550.0 2359720.0 2407810.0 2205170.0 2151800.0 2166870.0 2933900.0 2295110.0 True False 2626637.933413289 2372756.5586812245 2306209.279602564 2583987.0793243134 2597290.9484351296 2191406.7160637206 2369324.9435442323 2159353.6337212594 2401177.7176003046 2274777.1109685632 1.1546792521993108 1.0430721090168449 1.013817691624573 1.1359297870832248 1.141778214626595 0.9633500818595169 1.041563558961349 0.9492594343899661 1.0555661502053368 1.0 21.11729376226033 -6.265898917245279 24.999865841955494 1.0012525414069375 1.092258375265203 0.4720158257180177 0.05054146966102986 379.92807822362505 2129843.3512235554 0.017814788645969713 0.016242056845481922 5.421270566821468e-07 6.265898917245279 0.09100583385826555 VSPSKS(ph)PSLS(ph)PSPPSPLEK ddPTM_KYSE-520_SHP099_60min_R1 1 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.168)PS(0.32)KS(0.488)PS(0.074)LS(0.912)PS(0.027)PPS(0.012)PLEK 81.312 0.0028996 2188200000.0 619770.0 559540.0 603340.0 569250.0 571020.0 449830.0 388460.0 419770.0 486340.0 420020.0 True False 585390.122619136 532658.8585133374 642232.2617781325 623351.3488487467 615956.0253406336 447022.44411403354 427729.327804254 418313.9158450543 398032.91563370713 416298.94957061566 1.406177275304025 1.2795104553176009 1.54271891014991 1.4973646930689872 1.4796002391453325 1.0738015182961838 1.02745713926357 1.0048401906286744 0.9561227959961256 1.0 18.66726039262867 -6.331376513934029 4.233729519002509 1.004743628591057 1.4415580491912063 0.9079541249226617 0.06844732083298145 0.07080652932465963 2.478550562964979 0.027296662499440454 0.02417702941365985 4.6625498278036055e-07 6.331376513934029 0.4368144206001494 VSPSKS(ph)PSLSPSPPS(ph)PLEK ddPTM_KYSE-520_SHP099_60min_R1 4 VSPSKSPSLSPSPPSPLEK 19 1 P46821 P46821 MAP1B Microtubule-associated protein 1B;MAP1B heavy chain;MAP1 light chain LC1 2 VS(0.021)PS(0.2)KS(0.771)PS(0.007)LS(0.002)PS(0.026)PPS(0.972)PLEK;VS(0.01)PS(0.376)KS(0.612)PS(0.002)LS(0.001)PS(0.382)PPS(0.618)PLEK;VS(0.058)PS(0.377)KS(0.565)PSLSPS(0.01)PPS(0.99)PLEK;VS(0.009)PS(0.253)KS(0.638)PS(0.1)LSPS(0.151)PPS(0.849)PLEK 128.74 9.3739e-06 5654320000.0 3255110.0 2995440.0 2862900.0 2803210.0 2792240.0 2570420.0 2576920.0 2774060.0 3683190.0 3055790.0 True False 3074542.559399086 2851534.566152898 3047447.1148019605 3069626.235584182 3011973.4023276386 2554377.055331116 2837420.2219156125 2764437.433330475 3014415.5416640877 3028718.077968646 1.0151299923765682 0.9414988429908325 1.0061838165029464 1.0135067565096627 0.9944713653730896 0.843385547803885 0.9368386719633752 0.9127417482133486 0.9952776930911473 1.0 21.53027586338824 -6.11092892238853 20.678509444658985 0.9306726842385057 0.9930086727181172 0.2719728510588054 0.045495272656582 8.326406671322486 1537.0570181983542 0.014653436246167635 0.014653473106247938 7.745885583344879e-07 6.11092892238853 0.062335988479611526 VSPSTSYT(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 4 VSPSTSYTPSR 11 0 Q9BTE3;Q9BTE3-2 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 1 VSPSTSYT(0.974)PS(0.025)R;VSPSTSYT(0.959)PS(0.041)R;VSPSTSYT(0.986)PS(0.014)R;VSPSTSYT(0.996)PS(0.004)R 232.98 2.1295999999999998e-13 1514280000.0 1320490.0 1641030.0 1246040.0 1021550.0 1062940.0 1372530.0 1158710.0 1270180.0 1486370.0 1235900.0 True False 1247239.7873684468 1562192.4555637517 1326361.7321344893 1118637.8048597944 1146587.330698702 1363963.5311558489 1275843.7147198354 1265774.0420422405 1216482.6763385162 1224950.8875156504 1.0181957497887943 1.275310276914096 1.0827876820633295 0.9132103305207021 0.9360271847503379 1.113484258884969 1.0415468307528655 1.033326360217906 0.9930868973903854 1.0 20.224292477116922 -5.000610906888909 24.997604164234996 1.008170312082199 1.1548270240440803 0.354641557607414 0.07780646360813227 22.94468982569033 939047.7441150474 0.020290054469315973 0.041455914361437286 9.985943237940035e-06 5.000610906888909 0.14665671196188135 VSPTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 VSPTSPR 7 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 VS(0.012)PT(0.148)S(0.84)PR;VS(0.087)PT(0.365)S(0.548)PR 75.043 0.030364999999999996 275510000.0 1144200.0 990910.0 857660.0 814890.0 870570.0 1013820.0 848400.0 905760.0 1111180.0 993170.0 True False 1080728.94509385 943305.1962137666 912946.1359045197 892336.9005943878 939078.9061342758 1007492.3733225658 934164.5515860802 902618.1299659722 909417.7225682915 984371.2864745668 1.0978875145417732 0.9582819096563914 0.9274408431539591 0.9065043981425022 0.9539885194106978 1.0234881768349877 0.9489961404011517 0.9169488610325217 0.9238564097346699 1.0 19.908843050289658 -4.2640062505302305 4.732283706078951 0.9480104632278509 1.1062822934784355 0.6154579592300157 0.03483483941085499 0.12332400442175787 7.778745109553819 0.009247509627870937 0.06447773516472984 5.444948162109594e-05 4.2640062505302305 0.15827183025058467 VSQSALNPHQS(ph)PDFK ddPTM_KYSE-520_SHP099_60min_R1 1 VSQSALNPHQSPDFK 15 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 VSQSALNPHQS(1)PDFK 76.301 0.009137000000000001 325990000.0 408970.0 330430.0 275340.0 362150.0 274790.0 286840.0 281170.0 273160.0 387390.0 276080.0 True False 386283.6188385176 314555.6468144586 293088.8569595765 396568.6271156318 296414.4096587729 285049.72516210435 309593.40755476017 272212.4717160236 317049.7413071965 273634.14598699 1.411679150806287 1.149548224984371 1.071097526598568 1.4492658644089205 1.0832508077148602 1.0417184015318655 1.1314136488268531 0.9948044705245447 1.1586629298898636 1.0 18.061888745495143 -5.958015410577985 24.998159413325766 1.0683878429450964 1.2498711442984225 0.42451326679757373 0.11440685831976125 154.09357499909058 91748.60439127855 0.03474921493067938 0.03940187001070645 1.1015002230299223e-06 5.958015410577985 0.18148330135332613 VSQSALNPHQS(ph)PDFKR ddPTM_KYSE-520_SHP099_60min_R1 2 VSQSALNPHQSPDFKR 16 1 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 VSQSALNPHQS(1)PDFKR;VSQSALNPHQS(1)PDFKR 168.68 2.7711000000000002e-08 5863800000.0 4308810.0 4296900.0 3550140.0 5373900.0 4134900.0 3556610.0 3478750.0 3595700.0 4912700.0 3453800.0 True False 4069791.719900212 4090470.4742216063 3778987.7048248346 5884633.840278053 4460293.105637248 3534411.87773251 3830415.9993282366 3583227.3559426884 4020677.519088937 3423202.019015739 1.1888844705315944 1.1949252341811027 1.1039335931191678 1.719043692890214 1.3029593581858483 1.0324870860962938 1.118957040236142 1.046747266459302 1.174537026080917 1.0 21.706915004304715 -6.2525024700572205 23.006730620139113 1.0802430968635126 1.3081745754340768 0.33333983946559553 0.1605746671103388 285.61245335897286 735265.7925265441 0.05636227299734121 0.05544429127688547 5.591103476119467e-07 6.2525024700572205 0.22793147857056417 VSRT(ph)PEPK ddPTM_KYSE-520_SHP099_60min_R1 4 VSRTPEPK 8 1 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 VS(0.065)RT(0.935)PEPK;VS(0.084)RT(0.916)PEPK;VS(0.017)RT(0.983)PEPK;VS(0.004)RT(0.996)PEPK 98.634 0.0095151 6739300000.0 8808900.0 8338700.0 7636000.0 6514340.0 6976200.0 7522100.0 6764430.0 6914500.0 8960400.0 6765800.0 True False 8320252.756893205 7938096.3353561135 8128228.778031981 7133460.914992259 7525187.2508516675 7475151.783718685 7448244.598874861 6890515.213356432 7333417.233302369 6705860.275712751 1.2407435310018988 1.1837551050841708 1.2121082819859454 1.063765217540871 1.1221807406435758 1.1147192867695364 1.1107067986266987 1.0275363532867607 1.093583363176012 1.0 22.67699099256378 -1.00000000000005 0.17665334342036448 0.9993659311837734 2.01911166097456 0.7695954963398284 0.03526021818217737 26.934626679165564 0.29918812548135376 0.08312442197961796 7.337539245000868 0.0999999999999885 1.00000000000005 1.0197457297907868 VSS(ph)GFGLSK ddPTM_KYSE-520_SHP099_60min_R1 3 VSSGFGLSK 9 0 Q8IZQ1-2;Q8IZQ1 Q8IZQ1-2 WDFY3 WD repeat and FYVE domain-containing protein 3 1 VS(0.019)S(0.981)GFGLSK;VS(0.019)S(0.981)GFGLSK;VS(0.021)S(0.979)GFGLSK 123.67 0.00069794 878200000.0 2830700.0 2090460.0 1716930.0 1735040.0 1937200.0 2009310.0 1727700.0 1859600.0 2185010.0 1873270.0 True False 2673675.428139448 1990031.163755567 1827606.0549851295 1899937.6799412041 2089646.618839751 1996769.150974299 1902352.7767270985 1853149.481633903 1788267.2636197032 1856674.2851820078 1.4400347166317062 1.0718256721913324 0.9843439258954196 1.0233015532689167 1.1254783003766895 1.0754547347967163 1.0246023181931518 0.9981015498645961 0.9631561539316528 1.0 20.824289316009484 -4.265376831144641 3.976306945242985 1.0294097185750974 1.4759687808351494 0.8859686814938554 0.04442791891573895 0.07769915020496557 2.5688894265292683 0.012307470996882201 0.0999107705646477 5.4277916534850865e-05 4.265376831144641 0.44655906226005193 VSS(ph)LSPSLSQIVVSASR ddPTM_KYSE-520_SHP099_60min_R1 1 VSSLSPSLSQIVVSASR 17 0 Q5HYC2-2;Q5HYC2 Q5HYC2-2 KIAA2026 Uncharacterized protein KIAA2026 1 VSS(0.748)LS(0.126)PS(0.126)LSQIVVSASR 74.85300000000001 0.0077841 43600000.0 47312.0 62237.0 55008.0 74226.0 94409.0 55100.0 46767.0 50916.0 67281.0 44355.0 True False 44687.509045866274 59247.041100358445 58553.903695911926 81280.41672313945 101838.45118626978 54756.100461692746 51494.66476193566 50739.38427988371 55064.46641598772 43962.04920766782 1.0165019568303455 1.3476860648712579 1.3319193429613605 1.848876887862693 2.316508284343288 1.2455311216962615 1.171343594987697 1.1541633111823593 1.252545488857317 1.0 15.423971015901106 -6.497880955917486 24.857005283505416 1.1646566101553706 1.5837499598680331 0.27998747050579287 0.3291098978276679 1050.226865614184 1044314.1313335642 0.12795703657633856 0.11232520991774422 3.1777450001961965e-07 6.497880955917486 0.41909334971266254 VSS(ph)PELPKPWGDGDLPLEEENPNS(ph)PQEELHPR ddPTM_KYSE-520_SHP099_60min_R1 1 VSSPELPKPWGDGDLPLEEENPNSPQEELHPR 32 1 A0A494C133;A0A494C1C3;A0A494C058;A0A494C075;A0A087WYM5;A0A494C0M8;A0A494C171;Q9BVV6-2;Q9BVV6-4;Q9BVV6;Q9BVV6-3 A0A494C133 KIAA0586 Protein TALPID3 2 VS(0.471)S(0.529)PELPKPWGDGDLPLEEENPNS(1)PQEELHPR 138.69 3.0164e-06 47227000.0 19538.0 37397.0 25951.0 20440.0 32068.0 20168.0 20575.0 31341.0 37387.0 23205.0 True False 18454.188191962614 35600.39198595861 27623.84298306809 22382.611454489903 34591.56915803896 20042.124031060248 22654.921792649224 31232.285386044387 30598.463249573146 22999.42175321683 0.802376181017747 1.5478820453813946 1.2010668476569184 0.9731814866762615 1.5040190805319176 0.8714186054811157 0.9850213642645419 1.3579595922526209 1.3304014152135573 1.0 14.489309969229819 -5.012508001240399 24.787772796392286 1.1522566034490234 1.2249653707138337 0.0 0.25352130343466833 3350.1765804563292 6639268.816738743 0.06670026089695735 0.12368982209606925 9.716100509186147e-06 5.012508001240399 0.07270876726481035 VSS(ph)PIEK ddPTM_KYSE-520_SHP099_60min_R1 6 VSSPIEK 7 0 Q06190 Q06190 PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B subunit alpha 1 VS(0.008)S(0.992)PIEK;VSS(1)PIEK;VS(0.001)S(0.999)PIEK;VS(0.001)S(0.999)PIEK;VS(0.003)S(0.997)PIEK;VS(0.096)S(0.904)PIEK 179.28 0.00027632 7390440000.0 28162300.0 26368200.0 24281400.0 23018300.0 25118700.0 29870400.0 29499000.0 33221700.0 36577800.0 31848900.0 True False 26600081.078846816 25101432.092524905 25846617.89561364 25205952.311295774 27095398.784147225 29683967.753737733 32481046.8024962 33106461.67670307 29936193.571301196 31566743.52406928 0.8426615516600424 0.7951859865869709 0.818792659936743 0.7984970731008894 0.8583526762425555 0.9403557174373736 1.028964130485293 1.048776591461193 0.9483459561951708 1.0 24.911902101802582 -6.326536340299189 2.0884909672817513 1.0102090002797925 0.813505095063325 0.9052065679415411 0.028385444276747555 0.08731207443889864 0.7482051422039917 0.011357915478176505 0.009988952110857747 4.714804177927695e-07 6.326536340299189 -0.19670390521646752 VSS(ph)PLASFLQQQR ddPTM_KYSE-520_SHP099_60min_R1 2 VSSPLASFLQQQR 13 0 E9PPH6;Q8NEV8-2;Q8NEV8 E9PPH6 EXPH5 Exophilin-5 1 VS(0.046)S(0.954)PLASFLQQQR;VSS(1)PLASFLQQQR 157.2 2.0436000000000002e-06 879051000.0 803110.0 874900.0 752330.0 528330.0 644930.0 800520.0 608400.0 717020.0 1024100.0 711690.0 True False 758559.8873399056 832868.4907483261 800826.3955705608 578542.3243517934 695682.3218502572 795523.6577421842 669903.0094118003 714532.8249737263 838149.25546013 705384.9802864409 1.0753842349065492 1.180728983497943 1.1353040083804495 0.8201795339005664 0.9862448751995773 1.1277864995355302 0.9496984315426844 1.0129685844509626 1.1882153418120365 1.0 19.42805133132238 -5.090791422658718 24.997055887291587 1.0110559798344219 1.1356304964193156 0.2423753736707901 0.09571577963700385 84.87236692511982 23363.486803004784 0.026355301470665247 0.04564874629338037 8.113506292921521e-06 5.090791422658718 0.12457451658489371 VSS(ph)PLS(ph)PLSPGIK ddPTM_KYSE-520_SHP099_60min_R1 2 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 2 VS(0.128)S(0.872)PLS(1)PLSPGIK;VS(0.005)S(0.995)PLS(1)PLSPGIK 287.04 4.3345999999999995e-30 251780000.0 982250.0 847380.0 773910.0 871940.0 811450.0 782460.0 761560.0 769760.0 876840.0 750210.0 True False 927762.6344331697 806670.5928566895 823797.4768997822 954808.9154416802 875306.4984810625 777576.3769012009 838545.9169093547 767089.8822233351 717627.9593376236 743563.723054548 1.2477244460258705 1.0848708292853495 1.1079043414270335 1.2840983036656768 1.1771775186736078 1.0457427558554488 1.1277391444873364 1.031639735021152 0.9651196489113525 1.0 19.50409686028595 -7.01538552085576 1.0053966308684539 0.9818624197578327 1.1725912410660322 0.5729357542139961 0.06470092183349498 0.4403912472375337 0.8231502413671011 0.05546623868853643 0.02584024015680668 9.651937013771137e-08 7.01538552085576 0.19072882130819946 VSS(ph)PLSPLS(ph)PGIK ddPTM_KYSE-520_SHP099_60min_R1 4 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 2 VS(0.426)S(0.574)PLS(0.009)PLS(0.991)PGIK;VS(0.08)S(0.92)PLS(0.254)PLS(0.746)PGIK;VS(0.43)S(0.57)PLS(0.275)PLS(0.725)PGIK;VS(0.065)S(0.935)PLS(0.239)PLS(0.761)PGIK 164.66 9.6296e-07 988380000.0 1347450.0 1439190.0 1244030.0 1365540.0 1450330.0 1551070.0 1714440.0 1750450.0 2117550.0 1692810.0 True False 1272704.2624250182 1370049.1521317677 1324222.1643183755 1495320.5110354277 1564462.7197511105 1541389.196789797 1887752.3265219692 1744378.0975080992 1733056.299091492 1677813.0203862493 0.7585495206921383 0.8165684349119956 0.7892549099502914 0.8912319149193335 0.9324416372635823 0.9186894952304958 1.125126759409335 1.0396737159105642 1.0329257658833315 1.0 20.678150516572707 -5.882652048189089 0.9007305659022347 1.0502145671724514 0.7762957017605365 0.8406003574728198 0.04539909166620637 0.21774805948472048 0.38600432253156447 0.023956113073695016 0.033566279971382305 1.3102312449969824e-06 5.882652048189089 -0.2739188654119149 VSS(ph)PLSPLSPGIK ddPTM_KYSE-520_SHP099_60min_R1 3 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VS(0.112)S(0.888)PLSPLSPGIK;VS(0.09)S(0.91)PLSPLSPGIK;VS(0.054)S(0.946)PLSPLSPGIK 257.19 5.368899999999999e-22 796176000.0 2509990.0 2744420.0 1924580.0 1670230.0 1813940.0 2736160.0 1945380.0 2385650.0 2543720.0 2525600.0 True False 2370755.851158982 2612573.9437415954 2048641.506236879 1828968.1570270408 1956686.7580932158 2719082.6105129807 2142037.9954791735 2377374.7369648963 2081844.5699629372 2503225.148887069 0.9470805501506796 1.0436831640586317 0.8184008167014871 0.730644687650329 0.7816663071490618 1.0862317405695137 0.8557112796791456 0.9497246933708198 0.8316649306949169 1.0 21.255356627259975 -6.200185617054993 24.999603872971356 0.9359681191106022 0.8642865100052841 0.12537238580536947 0.10488977921781624 642.062724877731 262045.38844105604 0.03729603230271344 0.03729602233630319 6.306877315221111e-07 6.200185617054993 -0.07168160910531807 VSS(ph)PMDEVLASLK ddPTM_KYSE-520_SHP099_60min_R1 1 VSSPMDEVLASLK 13 0 Q8N9B5-2;Q8N9B5 Q8N9B5-2 JMY Junction-mediating and -regulatory protein 1 VS(0.046)S(0.954)PMDEVLASLK 154.72 3.5158999999999997e-06 25304000.0 92719.0 96481.0 84346.0 76726.0 96615.0 90320.0 80904.0 95234.0 109560.0 94604.0 True False 87575.69223925582 91845.90793906654 89783.0781183717 84018.01597148695 104218.05083584673 89756.27937749721 89082.56586694987 94903.65548178263 89666.66578284519 93765.88216079815 0.9339824915108585 0.9795237438449194 0.9575239527358536 0.8960403724182461 1.1114709149445665 0.9572381479179718 0.95005308769114 1.0121341931069696 0.9562824314826659 1.0 16.516775455901215 VSS(ph)PPNAMMSSR ddPTM_KYSE-520_SHP099_60min_R1 2 VSSPPNAMMSSR 12 0 Q9Y6Q9-2;Q9Y6Q9-3;Q9Y6Q9-5;Q9Y6Q9;Q9Y6Q9-4 Q9Y6Q9-2 NCOA3 Nuclear receptor coactivator 3 1 VS(0.005)S(0.995)PPNAMMSSR;VS(0.354)S(0.642)PPNAMMS(0.002)S(0.002)R 84.859 0.003587 1886650000.0 1480550.0 1455350.0 1160530.0 966850.0 1279330.0 1350660.0 978060.0 1209320.0 1467740.0 1293290.0 True False 1398420.940096748 1385432.801475114 1235339.6207136537 1058739.1333059487 1380005.9926080198 1342230.0299381113 1076931.8497457365 1205125.15117741 1201235.4147144335 1281832.4567643935 1.090954541459067 1.0808220638851889 0.963729397078853 0.825957501480671 1.0765884303565199 1.0471181493766928 0.8401502427736399 0.940158087601707 0.937123575218712 1.0 20.28977627465744 -4.7698866644465845 5.254675160464091 0.9501723232844965 1.0881883714370422 0.3343095372497198 0.07463890560004337 0.18659570518266055 15.084115023973308 0.02027207944817125 0.04881388392600146 1.6986868920342372e-05 4.7698866644465845 0.13801604815254565 VSS(ph)PTKPK ddPTM_KYSE-520_SHP099_60min_R1 8 VSSPTKPK 8 1 Q8WUA4;A0A087WZD8;Q8WUA4-2 Q8WUA4 GTF3C2 General transcription factor 3C polypeptide 2 1 VS(0.479)S(0.521)PTKPK;VS(0.129)S(0.84)PT(0.031)KPK;VS(0.138)S(0.861)PTKPK;VS(0.001)S(0.999)PTKPK;VS(0.092)S(0.902)PT(0.006)KPK;VS(0.141)S(0.849)PT(0.01)KPK;VS(0.066)S(0.913)PT(0.02)KPK;VS(0.152)S(0.63)PT(0.218)KPK 175.93 0.00011979 43598300000.0 57850500.0 47402700.0 40943300.0 41314000.0 42834800.0 48648200.0 45411200.0 46870100.0 57289700.0 49570100.0 True False 54641417.44288737 45125403.13909668 43582570.62959621 45240470.138493 46205655.06332688 48344568.53866647 50001807.26660281 46707518.562663585 46887334.63581116 49130947.47895417 1.1121588376917355 0.9184720721786748 0.887069614284669 0.920814119407575 0.9404592712794644 0.9839942239944679 1.0177252797337497 0.9506740854666258 0.9543340204439555 1.0 25.550128725608793 -6.266204190385467 22.7158229727986 0.9805363906380568 0.9479598637706165 0.03572150328859858 0.05973586034807742 377.5381160490733 1799866.7282829494 0.021234465568259024 0.019362169988570283 5.417461200499881e-07 6.266204190385467 -0.03257652686744028 VSS(ph)PTVNTTLR ddPTM_KYSE-520_SHP099_60min_R1 2 VSSPTVNTTLR 11 0 Q9NSK0-5;Q9NSK0;Q9NSK0-3 Q9NSK0-5 KLC4 Kinesin light chain 4 1 VS(0.006)S(0.989)PT(0.005)VNTTLR;VS(0.111)S(0.874)PT(0.015)VNTTLR 164.22 1.8017e-05 894490000.0 937130.0 962320.0 721900.0 552850.0 726500.0 890390.0 687860.0 779170.0 894330.0 882040.0 True False 885145.5307776596 916088.7027282321 768434.8290808395 605392.6977795864 783671.4167804442 884832.7457365984 757395.6016666691 776467.2411296443 731942.2162246446 874225.8118167372 1.0124907304420927 1.0478856724951866 0.8789889507882953 0.6924900747571316 0.8964176145198561 1.01213294526024 0.8663615183046562 0.8881769797165565 0.8372461740789697 1.0 19.737646449254807 -4.765909575310709 24.50372321259131 0.8775364748823875 1.0301882326377636 0.3254643895513848 0.0837867033702578 90.47445822665672 495958.3427886136 0.02272945971043944 0.05009594063767297 1.714314208641701e-05 4.765909575310709 0.1526517577553761 VSS(ph)PVFGATSSIK ddPTM_KYSE-520_SHP099_60min_R1 8 VSSPVFGATSSIK 13 0 I6L8A6;Q99708-3;Q99708;Q99708-2;F6Q6H0 I6L8A6 RBBP8 DNA endonuclease RBBP8 1 VSS(1)PVFGATSSIK;VS(0.003)S(0.995)PVFGAT(0.001)SSIK;VSS(1)PVFGATSSIK;VSS(1)PVFGATSSIK;VS(0.348)S(0.652)PVFGATSSIK;VS(0.005)S(0.995)PVFGATSSIK;VS(0.021)S(0.979)PVFGATSSIK;VS(0.007)S(0.993)PVFGATSSIK 273.07 1.8463999999999998e-22 6530060000.0 12300220.0 12913880.0 9517220.0 8006930.0 8623720.0 11983970.0 9319170.0 11902660.0 13906410.0 12099580.0 True False 11617902.27671934 12293477.820670925 10130715.229290415 8767906.219828714 9302357.70174516 11909173.598002054 10261242.649934543 11861372.450561736 11381356.496068068 11992387.134530809 0.9687731180114107 1.0251068184142553 0.8447621908502347 0.7311226798693361 0.7756885762101531 0.9930611365697868 0.8556463808934571 0.9890751789031368 0.9490484561907326 1.0 23.515615525996598 -7.269405251747084 1.4072225346234333 0.9872185169986496 0.878446861980163 0.17253154264277115 0.08941633379344359 0.8912753141939304 3.1396165915447884 0.0824730500420009 0.031477901558665644 5.377677429168465e-08 7.269405251747084 -0.10877165501848662 VSS(ph)QAEDTSSSFDNLFIDR ddPTM_KYSE-520_SHP099_60min_R1 8 VSSQAEDTSSSFDNLFIDR 19 0 H8Y6P7;P0CAP2-3;P0CAP2;Q9BZD3 H8Y6P7 GCOM1;POLR2M;GCOM2 DNA-directed RNA polymerase II subunit GRINL1A;Putative GRINL1B complex locus protein 2 1 VS(0.2)S(0.8)QAEDTSSSFDNLFIDR;VS(0.179)S(0.821)QAEDTSSSFDNLFIDR;VS(0.004)S(0.996)QAEDTSSSFDNLFIDR;VS(0.004)S(0.996)QAEDTSSSFDNLFIDR;VS(0.031)S(0.969)QAEDTSSSFDNLFIDR;VS(0.066)S(0.934)QAEDTSSSFDNLFIDR;VS(0.003)S(0.997)QAEDTSSSFDNLFIDR;VS(0.004)S(0.996)QAEDTSSSFDNLFIDR 331.8 1.2738999999999999e-64 1279794000.0 791975.0 774271.0 697049.0 731908.0 802489.0 1534265.0 1694757.0 2191010.0 2355960.0 2407190.0 True False 748042.5679869791 737073.8589555348 741981.8938578338 801468.3162638353 865640.3187621784 1524689.0830282972 1866079.576794405 2183409.8976955796 1928177.0529185107 2385864.1693654787 0.3135310792591857 0.30893370562313266 0.31099083652157955 0.3359236986558988 0.36282045301530963 0.6390510837143711 0.7821399058483239 0.9151442591454224 0.808167152881679 1.0 21.186080480018287 -6.514958460429644 1.3903589513496513 0.9032534250913968 0.30685778762087035 0.9695930968221405 0.04642012116141876 0.06153675831927652 0.2416627043980464 0.02300862984013833 0.016810532542447174 3.0552133254928796e-07 6.514958460429644 -0.5963956374705265 down VSS(ph)SGLTDSLFILK ddPTM_KYSE-520_SHP099_60min_R1 2 VSSSGLTDSLFILK 14 0 Q6P3S1 Q6P3S1 DENND1B DENN domain-containing protein 1B 1 VS(0.006)S(0.994)SGLTDSLFILK;VS(0.145)S(0.854)S(0.002)GLTDSLFILK 312.25 1.8535999999999998e-42 358860000.0 731730.0 796820.0 655630.0 654700.0 656450.0 861860.0 701830.0 957850.0 1068190.0 887170.0 True False 691139.4782324092 758539.5711487966 697892.9588450906 716922.4911572671 708108.8803104236 856480.8120492655 772777.8256007306 954527.4419138698 874233.6228785818 879310.364007815 0.78600174241352 0.8626528268033185 0.7936821711780574 0.815323599610041 0.8053002776891302 0.9740369806918975 0.878845351120941 1.0855409886939378 0.9942264513907308 1.0 19.74601294763733 -6.625078056525325 1.1760472557886614 1.0234654919678539 0.8111131986155905 0.7482554896200647 0.05044016186510717 0.22476584982074127 0.6321045284789795 0.02984739862373167 0.019293724069470934 2.3709475327164863e-07 6.625078056525325 -0.21235229335226335 VSSPLS(ph)PLS(ph)PGIK ddPTM_KYSE-520_SHP099_60min_R1 4 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 2 VSSPLS(1)PLS(1)PGIK;VSSPLS(1)PLS(1)PGIK;VSSPLS(1)PLS(1)PGIK;VSSPLS(1)PLS(1)PGIK 200.97 9.948299999999999e-09 988820000.0 1786720.0 1665810.0 1553020.0 1681060.0 1831590.0 2089070.0 2056430.0 2313660.0 2658230.0 2428800.0 True False 1687607.0798619846 1585781.9871682134 1653130.1541198567 1840827.4369708803 1975725.7126784506 2076031.3392288291 2264314.013222732 2305634.4534723014 2175562.4405251257 2407282.721577805 0.7010423265763635 0.6587435588491428 0.6867204002678778 0.7646910022119657 0.8207285729129069 0.8623961450893214 0.9406099221028069 0.9577746862907401 0.9037419747270886 1.0 21.198974157362453 -5.984584642689342 0.8138304309685227 0.9605522847232436 0.6628894030646475 0.9487123379271538 0.02629233257732149 0.12695472135496563 0.186169913061568 0.015435211713227114 0.019918989948571594 1.0361326456123483e-06 5.984584642689342 -0.2976628816585961 VSSPLS(ph)PLSPGIK ddPTM_KYSE-520_SHP099_60min_R1 2 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSS(0.003)PLS(0.993)PLS(0.003)PGIK;VSSPLS(0.998)PLS(0.002)PGIK 257.21 5.3662000000000005e-22 935728000.0 1412470.0 1634370.0 1212740.0 1097130.0 1188020.0 1791380.0 1243990.0 1555100.0 1721630.0 1717210.0 True False 1334117.473410863 1555852.4119606155 1290915.160852608 1201400.905335839 1281510.4150908517 1780199.3329413275 1369744.649372429 1549705.7210630693 1409025.3907604958 1701996.8553691634 0.7838542528455451 0.9141335408772837 0.758470943574457 0.7058772767680906 0.7529452308023753 1.0459474865217668 0.8047868273383684 0.9105220824435295 0.8278660364827043 1.0 20.698796940808975 -6.209360281332522 24.999926975904767 0.9051677233077264 0.7846847139941221 0.39065185985149364 0.08339996938561185 409.5555612147562 196601.90814593624 0.027730827609409873 0.02773079370518916 6.175039196669877e-07 6.209360281332522 -0.12048300931360434 VSSPLSPLS(ph)PGIK ddPTM_KYSE-520_SHP099_60min_R1 3 VSSPLSPLSPGIK 13 0 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSSPLSPLS(1)PGIK;VSSPLSPLS(1)PGIK;VSSPLSPLS(1)PGIK 149.35 6.7042999999999995e-06 1041990000.0 1578700.0 1867400.0 1337080.0 1178780.0 1581650.0 2035230.0 1606500.0 2157780.0 2396000.0 2007460.0 True False 1491126.3639395717 1777687.3009754568 1423270.3162036394 1290810.8967868688 1706116.856642521 2022527.3746397637 1768900.6979290894 2150295.164809637 1960946.7982447743 1989675.4661802459 0.7494319497250561 0.8934559083588837 0.7153278715025904 0.648754492241366 0.8574849947352986 1.0165111893964227 0.8890398097560116 1.0807265814749913 0.9855611287248647 1.0 20.924101702849704 -6.064756993487949 4.093750957196451 0.9913222540627786 0.7579900707684132 0.7146740484398932 0.07220973886105889 0.13272516302213175 4.372613183139911 0.02524555292114003 0.026001582992281246 8.614756501686892e-07 6.064756993487949 -0.23333218329436545 VSSPLSPLS(ph)PGIKS(ph)PTIPR ddPTM_KYSE-520_SHP099_60min_R1 1 VSSPLSPLSPGIKSPTIPR 19 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 2 VS(0.001)S(0.001)PLS(0.015)PLS(0.983)PGIKS(0.957)PT(0.043)IPR 72.30199999999999 0.0078729 995850000.0 510810.0 521810.0 520650.0 540350.0 613990.0 815850.0 825380.0 1099800.0 1254900.0 963110.0 True False 482474.35102550994 496741.4643472215 554211.932069454 591704.7015378482 662307.5198747764 810757.977525809 908817.4653325304 1095985.0504952492 1027041.7934546606 954577.5946882422 0.5054323019000696 0.5203782983293814 0.5805834278463821 0.6198602448144559 0.6938226117606301 0.8493369025601281 0.9520624309533929 1.148136156341685 1.0759123188828716 1.0 19.86450294909269 -6.368940995991001 0.9861525641258153 1.0931728386427484 0.5301603502554701 0.9601734853022861 0.04548230467709087 0.09404935696162245 0.19177760600699614 0.028033363979543084 0.02298661512511662 4.27620979540441e-07 6.368940995991001 -0.5630124883872782 VSSPLSPLSPGIKS(ph)PTIPR ddPTM_KYSE-520_SHP099_60min_R1 5 VSSPLSPLSPGIKSPTIPR 19 1 Q9P2B4 Q9P2B4 CTTNBP2NL CTTNBP2 N-terminal-like protein 1 VSSPLSPLSPGIKS(0.962)PT(0.038)IPR;VSSPLSPLSPGIKS(0.995)PT(0.005)IPR;VSSPLSPLSPGIKS(0.616)PT(0.384)IPR;VSSPLSPLSPGIKS(0.98)PT(0.02)IPR;VSSPLSPLS(0.004)PGIKS(0.97)PT(0.026)IPR 200.04 2.4084e-13 10605460000.0 10112980.0 11294580.0 8397270.0 6027830.0 6223850.0 8370980.0 5725840.0 7283660.0 9732830.0 7428760.0 True False 9551992.839674186 10751971.423289787 8938571.460307047 6600713.150866822 6713631.5861376105 8318733.60876264 6304663.786013255 7258394.6834790185 7965593.416678073 7362946.965887829 1.2973056690382396 1.4602809816644262 1.2139937312762143 0.8964770738466 0.9118131119566032 1.1298103391621483 0.8562690747634679 0.9858002124837791 1.0818485388503103 1.0 22.811851879373844 -5.04871434232234 4.027491312861786 0.9793274296113299 1.3751267762548496 0.7793729808630236 0.08654108197847876 0.09108286335653915 3.0777560408172486 0.023459190931102953 0.045521613154021326 8.938932496877038e-06 5.04871434232234 0.3957993466435197 VSSS(ph)PGVK ddPTM_KYSE-520_SHP099_60min_R1 2 VSSSPGVK 8 0 A0A0U1RRL5;P32519-2;P32519 A0A0U1RRL5 ELF1 ETS-related transcription factor Elf-1 1 VS(0.008)S(0.168)S(0.824)PGVK;VSS(0.001)S(0.999)PGVK 204.28 1.16e-06 2506040000.0 11598800.0 10345500.0 8845600.0 8196400.0 8751400.0 9623100.0 8852300.0 10134500.0 11542800.0 9863000.0 True False 10955391.442365432 9848486.651087908 9415801.529460408 8975383.391662488 9440085.391345335 9563038.66339231 9747176.874122432 10099345.784910087 9446918.490308756 9775621.493297879 1.12068490477832 1.0074537621817687 0.9631921137613438 0.9181394142373424 0.9656762383667795 0.9782537785396749 0.9970902495360577 1.0331154691120306 0.9663752321819661 1.0 23.22075699520159 -4.287293537448399 2.9919011117191876 0.97726811187719 1.1398849017787251 0.6949218257089856 0.02833284797472173 0.21439538137190245 2.921813978500819 0.008097562167949287 0.08077763106729077 5.160674439861788e-05 4.287293537448399 0.16261678990153516 VSSS(ph)PQKEGR ddPTM_KYSE-520_SHP099_60min_R1 3 VSSSPQKEGR 10 1 A0A1W2PQJ7;Q7Z5J4-3;Q7Z5J4-2;Q7Z5J4 A0A1W2PQJ7 RAI1 Retinoic acid-induced protein 1 1 VSS(0.004)S(0.996)PQKEGR;VS(0.001)S(0.012)S(0.986)PQKEGR;VS(0.001)S(0.035)S(0.964)PQKEGR 175.34 4.5829e-05 994130000.0 2460410.0 2432220.0 2600820.0 1632080.0 1965710.0 1877950.0 1453750.0 1700410.0 3135100.0 1768190.0 True False 2323926.152594266 2315372.500363353 2768473.018659135 1787192.3924972534 2120400.1936400393 1866229.017459818 1600709.237232749 1694511.6745886786 2565844.8694395577 1752525.2122310055 1.3260443481071829 1.3211635896614748 1.57970510172279 1.0197812733444878 1.2099113775035055 1.0648799825732977 0.9133730151562319 0.9668971737254072 1.4640844260227088 1.0 20.741003768652227 -5.274665701005396 24.74517654150224 1.086326794175686 1.400190277183935 0.45009894813865037 0.1607667457902579 603.8562748786758 1129755.7296637378 0.04534671018744122 0.06772576536832245 5.312932508504829e-06 5.274665701005396 0.31386348300824896 VSTLAGPS(ph)SDDENEEESKPEKEDEPQEDAK ddPTM_KYSE-520_SHP099_60min_R1 1 VSTLAGPSSDDENEEESKPEKEDEPQEDAK 30 2 A0A087X2H1;Q9ULT8;H0YJP0;G3V4V5 A0A087X2H1 HECTD1 E3 ubiquitin-protein ligase HECTD1 1 VS(0.002)T(0.006)LAGPS(0.506)S(0.462)DDENEEES(0.024)KPEKEDEPQEDAK 50.224 0.057183000000000005 1649300000.0 142720.0 144610.0 137940.0 130510.0 134780.0 125880.0 111640.0 128110.0 136820.0 113880.0 True False 134803.03709473365 137662.71853596476 146831.83311180343 142913.63116073754 145386.41920670107 125094.33622718485 122925.66070140278 127665.61631109881 111976.93695152336 112871.1117972992 1.1943094645583108 1.2196452780866358 1.3008805421841945 1.26616659378168 1.2880746622554302 1.1082936478187337 1.0890799137529552 1.1310743225455995 0.9920779123060145 1.0 16.78431676480189 -6.387505174300645 3.7583866089047073 1.0671222575770583 1.2550969874994686 0.7957967228371583 0.0483717967138892 0.1163387220491676 2.9192510345432585 0.018356767014801906 0.015917197227047042 4.097272281846494e-07 6.387505174300645 0.18797472992241038 VSTS(ph)PLTK ddPTM_KYSE-520_SHP099_60min_R1 1 VSTSPLTK 8 0 Q9Y320-2;Q9Y320 Q9Y320-2 TMX2 Thioredoxin-related transmembrane protein 2 1 VST(0.2)S(0.799)PLTK 123.29 0.00090515 578100000.0 1127700.0 1345100.0 878440.0 1111700.0 1113300.0 1332000.0 1217900.0 1420900.0 1679900.0 1163400.0 True False 1065144.2329857848 1280479.376963738 935065.6479536942 1217355.6337552068 1200910.3761894964 1323686.4939196883 1341017.2175585655 1415971.2295405513 1374872.5068328008 1153093.1811115027 0.9237278048588049 1.110473462109492 0.8109194150748121 1.0557304940280365 1.0414686305159668 1.1479440825794716 1.162973851138307 1.227976413992538 1.1923342617528256 1.0 20.137077670774936 -6.009029607743768 1.6552236522964408 1.1651053931324222 0.9669630328311297 0.43981550058756813 0.09186370518471118 0.3202403851023837 1.7797299244100182 0.034542771937816776 0.03800005920725849 9.794232115923195e-07 6.009029607743768 -0.1981423603012925 VSVS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 7 VSVSPGR 7 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 1 VS(0.324)VS(0.676)PGR;VSVS(1)PGR;VS(0.029)VS(0.971)PGR;VS(0.001)VS(0.999)PGR;VS(0.001)VS(0.999)PGR;VS(0.001)VS(0.999)PGR;VSVS(1)PGR 95.60799999999999 0.0062145 19718170000.0 12890030.0 11873620.0 11944590.0 9911110.0 10564140.0 10971500.0 10420520.0 10673070.0 12904750.0 11035320.0 True False 12174994.340262236 11303193.47253304 12714557.38341972 10853058.914516125 11395477.716265611 10903022.798828714 11473927.85607472 10636047.611283269 10561572.702274287 10937555.65014904 1.1131366760265429 1.0334295736706964 1.162467903260128 0.9922746234775259 1.0418669473110596 0.9968427268006763 1.0490394950281576 0.9724336909900282 0.9656245910968573 1.0 23.382787021589856 -5.671560083169199 0.6979239463170481 0.9871307503801439 1.1041939953677604 0.48024398644567334 0.04312510943477231 0.7527154555486946 0.7665623244960121 0.02548875616647101 0.052163213199693255 2.130295827949549e-06 5.671560083169199 0.11706324498761655 VSVTPPEESQNSDT(ph)PPRPDRLPLDEK ddPTM_KYSE-520_SHP099_60min_R1 3 VSVTPPEESQNSDTPPRPDRLPLDEK 26 2 Q05209-2;Q05209-3;Q05209;H3BM04 Q05209-2 PTPN12 Tyrosine-protein phosphatase non-receptor type 12 1 VSVTPPEESQNS(0.005)DT(0.994)PPRPDRLPLDEK;VSVTPPEES(0.001)QNS(0.015)DT(0.983)PPRPDRLPLDEK;VS(0.053)VT(0.048)PPEES(0.04)QNS(0.149)DT(0.709)PPRPDRLPLDEK 155.17 2.8552e-07 2221800000.0 638218.0 605777.0 540516.0 416489.0 470827.0 629963.0 453347.0 530936.0 712981.0 521640.0 True False 602814.7752839596 576674.5636301857 575358.5262161779 456071.98933801666 507878.4062608211 626031.1672440898 499175.73900034715 529094.3069373942 583521.6231883789 517018.6754297788 1.1659439086660874 1.115384397189941 1.1128389622249202 0.8821189852743726 0.9823212011416034 1.2108482671804706 0.9654887970640529 1.02335627721296 1.1286277477371947 1.0 18.979856868058867 -5.024357938830947 24.513224580066172 1.0290483168793751 1.1340261082382552 0.2400128003765919 0.08545245038922591 861.440697316867 866933.7761833402 0.023782979664037057 0.041501279629812926 9.45457608545832e-06 5.024357938830947 0.10497779135888008 VSWADNS(ph)VPK ddPTM_KYSE-520_SHP099_60min_R1 2 VSWADNSVPK 10 0 J3QS93;E7EQM8;P43146 J3QS93 DCC Netrin receptor DCC 1 VS(0.031)WADNS(0.969)VPK;VS(0.031)WADNS(0.969)VPK 55.401 0.057066 356050000.0 859990.0 909700.0 638930.0 583910.0 706170.0 849010.0 653740.0 853140.0 925680.0 982130.0 True False 812284.6403524384 865996.646512461 680116.4501241446 639404.6308410574 761741.561442322 843711.0136657306 719826.4190875585 850180.6564643729 757599.8464938313 973429.0922855783 0.834456918115342 0.889635057525485 0.698681039547785 0.6568579426157863 0.7825342056027715 0.8667411117585627 0.7394749394611072 0.8733873511712884 0.7782794376065058 1.0 19.892716366650248 -9.332362187540783 0.5042923647811031 1.0312508274884322 0.7790067421144569 0.427505929374972 0.07289484268430234 7.373333242989336 1.834304545300977 0.5079590057294842 0.03854745081712739 4.651979716539567e-10 9.332362187540783 -0.25224408537397536 VSWQDLK ddPTM_KYSE-520_SHP099_60min_R1 1 VSWQDLK 7 0 Q13243-3;Q13243 Q13243-3 SRSF5 Serine/arginine-rich splicing factor 5 0 107.29 0.047682999999999996 0.0 560770.0 597930.0 400000.0 408520.0 585870.0 599760.0 491860.0 506940.0 517090.0 572430.0 False True 529662.97023272 569204.5452887722 425784.6400226288 447345.61797398364 631974.6358556901 596016.6753703249 541582.0088910061 505181.543460686 423199.4907781253 567358.7155438007 0.9335592381357002 1.0032533733851294 0.7504681400981453 0.7884705138357005 1.113889006269969 1.0505111828573148 0.9545671795522023 0.8904094175701183 0.7459116766585633 1.0 19.11390164963989 VT(ph)FNPDKEEQLT(ph)T(ph)S(ph)GS(ph)GHIK ddPTM_KYSE-520_SHP099_60min_R1 1 VTFNPDKEEQLTTSGSGHIK 20 1 Q96MT7-1;Q96MT7 Q96MT7-1 CFAP44 Cilia- and flagella-associated protein 44 5 VT(1)FNPDKEEQLT(1)T(1)S(1)GS(1)GHIK 48.477 0.03932 73552000.0 16215.0 19388.0 16257.0 14085.0 16467.0 17123.0 13074.0 13870.0 21264.0 16249.0 True False 15315.521626198886 18456.57137801869 17304.952232119693 15423.634165190342 17762.8592155865 17016.12900554566 14395.647509943923 13821.88820728233 17402.993621818372 16105.046501530709 0.9509765541343341 1.1460116787781072 1.0745049528714454 0.9576895145086602 1.1029374683207667 1.0565712433011825 0.8938594190694007 0.858233362192939 1.0805925720341323 1.0 13.975225205897678 -6.744370740230043 24.948533188309202 0.9463574558760448 1.0521462924470883 0.23090409232602183 0.0790479849105266 298.4923867058 436294.1797774528 0.029712369166190307 0.022954652023493317 1.8014792318393335e-07 6.744370740230043 0.10578883657104354 VT(ph)KSPAPVHR ddPTM_KYSE-520_SHP099_60min_R1 1 VTKSPAPVHR 10 1 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2;B0QYZ7 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 VT(0.5)KS(0.5)PAPVHR 71.241 0.04081 540560000.0 301420.0 268360.0 293760.0 292400.0 272640.0 306340.0 250080.0 280300.0 370080.0 275690.0 True False 284699.63173412695 255467.58278342747 312696.2396326186 320189.6080867344 294095.2168905996 304428.0184289468 275360.5269456001 279327.70472251205 302882.8009576065 273247.60108357423 1.0419108186316703 0.9349307432905563 1.1443695695501415 1.1717929336506883 1.0762956956414376 1.1141104888816054 1.00773264194689 1.022251260815564 1.1084554805111289 1.0 18.059849304569955 -9.662538999442535 13.925741198966566 0.9999997092324142 1.0687362421334097 0.08795729639530525 0.06673865070240827 0.0 0.0 0.06894097796495306 0.016720643181345952 2.175008710478813e-10 9.662538999442535 0.06873653290099546 VT(ph)RSPPETAAPVEDMAR ddPTM_KYSE-520_SHP099_60min_R1 1 VTRSPPETAAPVEDMAR 17 1 Q9Y3L3;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;A0A3B3IU28 Q9Y3L3 SH3BP1 SH3 domain-binding protein 1 1 VT(0.535)RS(0.464)PPET(0.001)AAPVEDMAR 68.445 0.054709 426670000.0 2813300.0 2574400.0 2375200.0 2107000.0 2088100.0 2298600.0 2362700.0 2151300.0 2503600.0 2031000.0 True False 2657240.6408254867 2450721.95974682 2528309.1924543683 2307248.6465073493 2252421.5903361985 2284253.5847776257 2601544.7737298836 2143837.6424171953 2049009.3506200397 2013006.9200940917 1.3200355221338644 1.217443385456553 1.2559863392502348 1.146170250820352 1.1189338535562094 1.1347470105422466 1.2923675262916048 1.0649926838388555 1.0178849015204903 1.0 20.940920701130505 -1.0000000000003277 0.10099232935355094 0.8930877814434071 2.0594073999420357 0.6199207305502972 0.06550218703375545 93.27163448573602 0.6680312385248064 0.8670031387538295 15.081440221099593 0.09999999999992454 1.0000000000003277 1.1663196184986286 VT(ph)S(ph)S(ph)IT(ph)IY(ph)PSDSSSPR ddPTM_KYSE-520_SHP099_60min_R1 1 VTSSITIYPSDSSSPR 16 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 5 VT(0.732)S(0.732)S(0.683)IT(0.703)IY(0.698)PS(0.645)DS(0.648)S(0.08)S(0.08)PR 43.813 0.043371 1023200000.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 True False 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 VT(ph)SPEKAEEAK ddPTM_KYSE-520_SHP099_60min_R1 6 VTSPEKAEEAK 11 1 P56211;H3BMD8;P56211-2;H3BTD3 P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 VT(0.964)S(0.036)PEKAEEAK;VT(0.919)S(0.081)PEKAEEAK;VT(0.5)S(0.5)PEKAEEAK;VT(0.992)S(0.008)PEKAEEAK;VT(0.968)S(0.032)PEKAEEAK;VT(0.978)S(0.022)PEKAEEAK 234.9 1.3361e-13 5722610000.0 8350020.0 6971320.0 6114710.0 6310130.0 6465550.0 7387340.0 7202700.0 7987720.0 7685180.0 7550150.0 True False 7886827.745247802 6636407.323035342 6508873.990481922 6909842.857990234 6974352.001052721 7341232.870865356 7930819.207577877 7960012.46366787 6289745.039622182 7483261.54492781 1.05392918554257 0.8868335395190791 0.8697910598746436 0.9233731597519478 0.931993617913832 0.9810204850906592 1.0598078337851793 1.0637089744729293 0.8405085138157974 1.0 22.83523576846481 -6.3076283819962935 3.9399933975457953 0.9988783640271829 0.9260369213603038 0.11885387345080733 0.07359309637607447 0.4203307939073012 13.921306835603726 0.0267665864338599 0.024058031843185987 4.924607452776816e-07 6.3076283819962935 -0.07284144266687909 VT(ph)SPISTDGMAEELTMDGVAGEHSQIPNGSR ddPTM_KYSE-520_SHP099_60min_R1 1 VTSPISTDGMAEELTMDGVAGEHSQIPNGSR 31 0 F8VZQ2;Q9UKN5 F8VZQ2 PRDM4 PR domain zinc finger protein 4 1 VT(0.483)S(0.483)PIS(0.016)T(0.018)DGMAEELTMDGVAGEHSQIPNGSR 86.507 7.2087e-06 0.0 19900.0 20295.0 15024.0 13166.0 14922.0 16480.0 12744.0 21769.0 18949.0 13804.0 True False 18796.107330333496 19319.997736583944 15992.47107924993 14417.292681497756 16096.276505433998 16377.142207054387 14032.287889454274 21693.4884199228 15508.339265417435 13681.70729934949 1.3738129985595566 1.4121043020341864 1.168894402529011 1.05376415136313 1.1764815715798358 1.1970101281024375 1.0256240381725936 1.5855834323362727 1.1335090662372813 1.0 13.73996065060778 -4.762635484994833 24.948259853244803 1.1807522584575698 1.3929587070510003 0.24958773501097975 0.15496406482439262 42.00895767856357 876309.0928479722 0.040197235925616616 0.09192012790739863 1.727287042085061e-05 4.762635484994833 0.21220644859343052 VT(ph)SRGPDEEAVVDLGK ddPTM_KYSE-520_SHP099_60min_R1 1 VTSRGPDEEAVVDLGK 16 1 Q9Y6M7-7;Q9Y6M7-13;Q9Y6M7-14;Q9Y6M7-8;E9PFN4 Q9Y6M7-7 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 VT(0.564)S(0.436)RGPDEEAVVDLGK 125.77 0.00026203 0.0 282550.0 244300.0 213850.0 304850.0 307680.0 283960.0 263720.0 415420.0 482810.0 294640.0 True False 266876.3882505391 232563.46129822417 227635.113172098 333822.8523435054 331892.66554027196 282187.70031038596 290379.39125917177 413979.0049797566 395143.874649649 292029.71882645163 0.9138672232504502 0.7963691580185808 0.7794929710814047 1.1431126040356556 1.1365030479569451 0.9662978872300506 0.9943487684270222 1.4175920404381082 1.353094733774258 1.0 18.155755668959365 -5.68558470713625 0.63157038432014 1.2255318996013491 0.7891636568589504 0.42669895811120817 0.15364713566275465 0.9367982612718299 0.7690343623962292 0.11013078634371216 0.23257280191226212 2.0626013271960634e-06 5.68558470713625 -0.4363682427423987 VTAEADSSS(ph)PTGILATSESK ddPTM_KYSE-520_SHP099_60min_R1 2 VTAEADSSSPTGILATSESK 20 0 A0MZ66-7;A0MZ66-8;A0MZ66-4;A0MZ66-5;A0MZ66-6;A0MZ66;A0MZ66-3 A0MZ66-7 KIAA1598 Shootin-1 1 VTAEADSSS(0.999)PT(0.001)GILATSESK;VTAEADSS(0.001)S(0.97)PT(0.029)GILATSESK 428.17 6.366899999999998e-109 374270000.0 947730.0 1189190.0 779750.0 751980.0 690280.0 1165480.0 788770.0 1053170.0 1106320.0 1127860.0 True False 895157.5276470842 1132059.5273894197 830013.9326441116 823447.9531089697 744601.1088440544 1158205.807007144 868506.5692533626 1049516.7990817255 905440.1760576619 1117868.037861801 0.8007720923475854 1.0126951384662213 0.7424972398635875 0.7366235773982925 0.666090346646182 1.036084553613769 0.7769312117686057 0.9388557177904343 0.8099705380158646 1.0 20.09231846022533 -6.2601157726938395 24.999544781590007 0.9000820567881146 0.7982139583445231 0.22267355299294267 0.11119037767361194 234.92450758567057 4437136.231238753 0.03851896043703558 0.036582337849734775 5.493943987106811e-07 6.2601157726938395 -0.10186809844359146 VTAGWPSEPGQGDLNPES(ph)PAALGQDLLEPR ddPTM_KYSE-520_SHP099_60min_R1 1 VTAGWPSEPGQGDLNPESPAALGQDLLEPR 30 0 Q92766-5;Q92766-3;Q92766;Q92766-2;A0A087X055;Q92766-4 Q92766-5 RREB1 Ras-responsive element-binding protein 1 1 VTAGWPSEPGQGDLNPES(1)PAALGQDLLEPR 110.4 0.00025344 37684000.0 20470.0 29510.0 23455.0 16199.0 21103.0 28269.0 20592.0 28734.0 30848.0 34053.0 True False 19334.488294066665 28092.29530458696 24966.94682932688 17738.548089593067 22763.68604035475 28092.562685146884 22673.64031855324 28634.32846056603 25246.780814797454 33751.31691283312 0.572851374777474 0.832331828033221 0.7397325234392204 0.5255661026621575 0.6744532694574478 0.8323397501110651 0.671785352171907 0.8483914430514716 0.748023577272565 1.0 15.042656174055075 -8.560589471611163 0.4093698233009111 1.0300098471762171 0.6752975645915931 0.4831679011531589 0.09621812019006229 2.2694147320255285 0.701199167922226 0.23509897902575738 0.07058149957280718 2.7504929010770245e-09 8.560589471611163 -0.35471228258462406 VTDALPEPEPPGAMAAS(ph)EDEEEEEEALEAMQSR ddPTM_KYSE-520_SHP099_60min_R1 6 VTDALPEPEPPGAMAASEDEEEEEEALEAMQSR 33 0 Q9Y3E7-2;Q9Y3E7-4;Q9Y3E7;Q9Y3E7-3 Q9Y3E7-2 CHMP3 Charged multivesicular body protein 3 1 VTDALPEPEPPGAMAAS(0.999)EDEEEEEEALEAMQS(0.001)R;VTDALPEPEPPGAMAAS(0.998)EDEEEEEEALEAMQS(0.002)R;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR;VTDALPEPEPPGAMAAS(1)EDEEEEEEALEAMQSR 255.66 2.0341999999999998e-32 1627920000.0 1090985.0 1563950.0 1089777.0 916786.0 984780.0 1407283.0 995221.0 1344474.0 1551293.0 1382932.0 True False 1030465.8872253209 1488815.4944631897 1160025.769124851 1003917.065798239 1062276.5833682688 1398499.6247918764 1095827.6511009568 1339810.3334965913 1269617.2961141604 1370680.2983848157 0.7517915654289354 1.086187272274638 0.8463138855149549 0.7324224817276765 0.7749995273296303 1.0202959993222653 0.7994772029569988 0.9774783624419195 0.926267998168686 1.0 20.386460681126817 -7.2823713084733015 24.37019188414771 0.9639049061149622 0.8651801118366768 0.17163150366023217 0.10913094686180355 1263.2366077438878 1470724.541616569 0.060383051373155014 0.029062587857127 5.219497471403306e-08 7.2823713084733015 -0.0987247942782854 VTDAPNKS(ph)EISK ddPTM_KYSE-520_SHP099_60min_R1 2 VTDAPNKSEISK 12 1 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 VTDAPNKS(0.99)EIS(0.01)K;VTDAPNKS(0.994)EIS(0.006)K 98.573 0.001076 793590000.0 860250.0 907720.0 757440.0 731860.0 714880.0 805900.0 763800.0 829690.0 1009650.0 764560.0 True False 812530.2176341409 864111.7686845023 806265.7943468491 801415.7543582674 771136.9888892015 800870.0791665737 841012.357969648 826811.9990411013 826323.0112052727 757786.5932186784 1.0722414792045085 1.1403101828632394 1.0639747411236937 1.057574469553856 1.0176176192479438 1.056854378704299 1.1098274441587443 1.0910881855658587 1.0904429012071695 1.0 19.531432090308737 -4.802004362153215 23.758729507849644 1.0641107026079584 1.106275810028794 0.20836113985029048 0.03492141017789464 130.93678549957454 76688.57204878617 0.00938573182185514 0.019538536697202256 1.577595423890115e-05 4.802004362153215 0.04216510742083557 VTEGLTDVILYHQPDDK ddPTM_KYSE-520_SHP099_60min_R1 3 VTEGLTDVILYHQPDDK 17 0 O60506-2;O60506;O60506-4;O60506-3;B7Z645;O60506-5 O60506-2 SYNCRIP Heterogeneous nuclear ribonucleoprotein Q 0 ;; 160.81 7.9688e-08 1176873000.0 794620.0 734190.0 472992.0 541799.0 743060.0 729890.0 580447.0 636393.0 632680.0 667721.0 False True 750540.8445643022 698918.4103583426 503481.8211339583 593291.4140621915 801534.5945669335 725334.4857710516 639124.2473768098 634185.5012182435 517801.2605649003 661805.511419077 1.1340806802212244 1.056078256072069 0.7607700637825862 0.8964739698072715 1.211133151261074 1.0959934199033075 0.9657282031489389 0.958265669106307 0.7824069936416886 1.0 19.336047780689654 -7.3314212454546 2.750581554444934 0.8905042936992106 1.0164577805671795 0.12926538046308622 0.1290261362514269 0.6365179410576604 9.275870381939624 0.09321249951559597 0.038846792044876205 4.662069618609617e-08 7.3314212454546 0.12595348686796892 VTEHGT(ph)PKPFR ddPTM_KYSE-520_SHP099_60min_R1 5 VTEHGTPKPFR 11 1 Q9NZN5;E9PMR6;Q9NZN5-2 Q9NZN5;Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 VT(0.001)EHGT(0.999)PKPFR;VTEHGT(1)PKPFR;VT(0.004)EHGT(0.996)PKPFR;VT(0.002)EHGT(0.998)PKPFR;VTEHGT(1)PKPFR 187.63 1.7166999999999998e-06 30924150000.0 22288180.0 21951050.0 20739830.0 21562100.0 17963020.0 19963600.0 16411420.0 19315450.0 23070780.0 18179430.0 True False 21051810.22501468 20896488.608802218 22076752.626701295 23611355.501118243 19376607.478397068 19838999.767278586 18070446.49362429 19248449.212209933 18881707.919035718 18018374.393582515 1.1683523588294715 1.159732179626858 1.2252355370395802 1.3104043120298212 1.0753804452691529 1.101042709732156 1.0028899443925596 1.0682678021756238 1.0479140629778838 1.0 24.102965522193873 -5.896692084673246 7.165030552001918 1.0503800603576268 1.212154999279833 0.7512400379846488 0.047162682169814625 0.12135282868921504 7.452654804284021 0.015421266059578996 0.01752978957248543 1.2685509512929418e-06 5.896692084673246 0.1617749389222063 VTEHGT(ph)PKPFRK ddPTM_KYSE-520_SHP099_60min_R1 1 VTEHGTPKPFRK 12 2 Q9NZN5;E9PMR6;Q9NZN5-2 Q9NZN5;Q9NZN5-2 ARHGEF12 Rho guanine nucleotide exchange factor 12 1 VT(0.067)EHGT(0.933)PKPFRK 55.885 0.045133 298830000.0 662610.0 555360.0 593580.0 406830.0 452460.0 432680.0 459120.0 468180.0 605550.0 445750.0 True False 625853.7024197122 528679.6719876446 631843.1165615806 445495.0008821007 488066.0278547554 429979.4836255031 505532.3301793977 466555.9928540329 495597.38467325614 441801.0017882527 1.4165963858988095 1.1966466120441968 1.4301532002057606 1.0083612284238743 1.1047191515619892 0.9732424369458188 1.144253471887079 1.0560319939646603 1.121766095294612 1.0 18.753037164459347 -5.267044812010786 24.997906747182707 1.0626404192048509 1.332683524028272 0.7389200889182903 0.07866425448481498 221.36383894125197 987191.2750936246 0.020480958021187393 0.031342423095559506 5.4069852891775105e-06 5.267044812010786 0.2700431048234211 VTENLASLT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 VTENLASLTPK 11 0 Q96DF8 Q96DF8 DGCR14 Protein DGCR14 1 VTENLASLT(1)PK;VTENLAS(0.004)LT(0.996)PK;VTENLASLT(1)PK;VTENLASLT(1)PK 184.51 5.1147e-06 2003260000.0 3923190.0 4863100.0 3624070.0 3628880.0 3674650.0 4518710.0 3546980.0 4443610.0 4960990.0 4825260.0 True False 3705562.8300146307 4629469.376338085 3857683.350917022 3973767.6641374473 3963824.0491015315 4490507.054759634 3905543.353588874 4428196.154056368 4060199.2723807725 4782511.950395477 0.7748151742115792 0.9679995417377396 0.8066228356414292 0.8308955012248003 0.8288163396588594 0.9389431958216651 0.8166301295422619 0.925914289391413 0.848967930345689 1.0 22.189337142862577 -13.999999999999998 0.21216706158234763 1.6735933347200473 0.8435282334531955 0.34793093592073954 0.05924015456038712 165.35667582431856 1.650322273769192 47.3251070808397 0.11718799838248074 1.0000000000000041e-14 13.999999999999998 -0.8300651012668518 VTEQEWR ddPTM_KYSE-520_SHP099_60min_R1 4 VTEQEWR 7 0 P09497-2;P09497 P09497-2 CLTB Clathrin light chain B 0 ;;; 184.89 0.00088743 4123880000.0 2993950.0 2645560.0 2431580.0 4031670.0 3654250.0 3399650.0 4197800.0 3037510.0 4024930.0 1372740.0 False True 2827869.625208644 2518463.3265334843 2588323.537465558 4414838.704634209 3941818.685161651 3378431.523313859 4622154.590579978 3026973.5867701652 3294104.1722284313 1360578.5915755604 2.078431663351361 1.8510237792416566 1.9023697370309638 3.2448244680388454 2.897163537313192 2.483084434984097 3.397197794526142 2.2247693779048126 2.421105397824784 1.0 20.375788863215362 -5.216949285490195 24.54710827373215 2.625277235291865 1.9346493475454623 0.13853626026687926 0.6281853748800347 576.7103768306259 318194.7782203124 0.16143623169696059 0.2796135037090812 6.06807185041391e-06 5.216949285490195 -0.6906278877464029 VTFFEPGS(ph)GDENGTSNK ddPTM_KYSE-520_SHP099_60min_R1 5 VTFFEPGSGDENGTSNK 17 0 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 VTFFEPGS(1)GDENGTSNK;VTFFEPGS(1)GDENGTSNK;VTFFEPGS(1)GDENGTSNK;VTFFEPGS(1)GDENGTSNK;VTFFEPGS(0.978)GDENGT(0.006)S(0.016)NK 279.5 1.6944e-30 563610000.0 1363380.0 1098360.0 1006740.0 1159000.0 1301310.0 1205570.0 1274550.0 1338560.0 1320390.0 1222230.0 True False 1287750.5935693528 1045593.136928029 1071636.071240952 1269151.0115339437 1403715.6935589286 1198045.5904465155 1403393.9524092888 1333916.847782253 1080640.4603232122 1211401.993080551 1.063024991641833 0.8631264789891289 0.8846246558632619 1.0476712262182588 1.158752999893397 0.9889744257394932 1.1584874058532042 1.101134764018467 0.892057687287754 1.0 20.208246259448835 -5.326142413247469 7.094691221573352 1.0608481536035863 0.9297865232660756 0.23733625569963068 0.09080740188620477 0.3166072194584937 30.032550142815506 0.025272872183229135 0.03772503898177872 4.719082683800736e-06 5.326142413247469 -0.13106163033751073 VTFFEPGS(ph)GDENGTSNKEDEFR ddPTM_KYSE-520_SHP099_60min_R1 12 VTFFEPGSGDENGTSNKEDEFR 22 1 O95793-2;O95793-3;O95793;Q5JW30 O95793-2 STAU1 Double-stranded RNA-binding protein Staufen homolog 1 1 VTFFEPGS(0.985)GDENGT(0.008)S(0.008)NKEDEFR;VTFFEPGS(1)GDENGTSNKEDEFR;VTFFEPGS(1)GDENGTSNKEDEFR;VTFFEPGS(1)GDENGTSNKEDEFR;VTFFEPGS(1)GDENGTSNKEDEFR;VTFFEPGS(1)GDENGTSNKEDEFR;VTFFEPGS(1)GDENGTSNKEDEFR;VTFFEPGS(0.989)GDENGT(0.004)S(0.007)NKEDEFR;VTFFEPGS(1)GDENGTSNKEDEFR;VTFFEPGS(1)GDENGTSNKEDEFR;VTFFEPGS(1)GDENGTSNKEDEFR;VTFFEPGS(1)GDENGTSNKEDEFR 284.56 1.3133e-44 17173820000.0 8835120.0 7857630.0 7735490.0 7751580.0 7792740.0 7497210.0 7443840.0 8012480.0 9645520.0 7755130.0 True False 8345018.281224927 7480137.660256922 8234132.062621617 8488287.832602497 8405984.303374592 7450417.131441163 8196335.992077487 7984686.577006883 7894136.711772085 7686425.5815998325 1.085682570218551 0.97316204793074 1.0712563304239766 1.104321864888955 1.0936142182261255 0.9692954224752219 1.0663390811586473 1.0388036015233197 1.0270231108032168 1.0 22.87388142699808 -6.2322271762505075 24.994946027076022 1.0255953645389477 1.0629361797938404 0.22617097143148557 0.04118408833580227 1421.7740941883847 1216519.260673586 0.014174853553933947 0.014173237101323843 5.858316401268335e-07 6.2322271762505075 0.037340815254892634 VTFGEDLS(ph)PEVFDESLPANTPLRK ddPTM_KYSE-520_SHP099_60min_R1 1 VTFGEDLSPEVFDESLPANTPLRK 24 1 E9PEI0;Q69YH5 E9PEI0 CDCA2 Cell division cycle-associated protein 2 1 VTFGEDLS(0.995)PEVFDES(0.003)LPANT(0.001)PLRK 58.26 0.026777 333480000.0 89453.0 89352.0 93361.0 62605.0 81818.0 73844.0 72168.0 87699.0 128760.0 84961.0 True False 84490.86376986536 85059.3957999138 99379.19944288167 68554.96037712051 88256.61111926018 73383.11220495903 79463.44573180602 87394.79263810052 105380.42977545786 84208.31163865782 1.0033553948025937 1.010106890218961 1.1801590307299226 0.8141115650352113 1.0480748206658486 0.8714473758819643 0.9436532354761812 1.0378404570455713 1.2514255151872737 1.0 16.36167501863768 -7.5323481760776225 24.623756171955588 1.1320195842545122 0.982789933030161 0.21666839746359956 0.10883658235030566 249.9113452290928 649835.650425457 0.0707817343214169 0.02683018061109108 2.935295467218951e-08 7.5323481760776225 -0.14922965122435117 VTFLIGDSMS(ph)PDS(ph)DTELR ddPTM_KYSE-520_SHP099_60min_R1 3 VTFLIGDSMSPDSDTELR 18 0 A0A087WX11;J3KNG8;Q8TF40-3;Q8TF40 A0A087WX11 FNIP1 Folliculin-interacting protein 1 2 VTFLIGDS(0.15)MS(0.85)PDS(0.969)DT(0.031)ELR;VTFLIGDS(0.036)MS(0.964)PDS(1)DTELR;VTFLIGDS(0.401)MS(0.599)PDS(0.999)DT(0.001)ELR 208.4 4.6418e-18 389020000.0 576964.0 572093.0 538918.0 541771.0 604996.0 526905.0 458207.0 534720.0 700194.0 540529.0 True False 544958.6567707807 544608.7935508998 573657.5165792878 593260.7529506098 652605.7432436373 523616.39044951403 504527.0352293774 532865.1811245859 573056.420054341 535740.333585199 1.0172066999770062 1.0165536537194293 1.0707753003033118 1.1073662290469741 1.2181381582311894 0.9773697398242336 0.9417380092573192 0.9946333096831212 1.0696533080110304 1.0 19.031174388886917 VTFLIGDSMS(ph)PDSDTELR ddPTM_KYSE-520_SHP099_60min_R1 5 VTFLIGDSMSPDSDTELR 18 0 A0A087WX11;J3KNG8;Q8TF40-3;Q8TF40 A0A087WX11 FNIP1 Folliculin-interacting protein 1 1 VTFLIGDS(0.001)MS(0.999)PDSDTELR;VTFLIGDS(0.345)MS(0.655)PDSDTELR;VTFLIGDS(0.095)MS(0.905)PDSDTELR;VTFLIGDS(0.039)MS(0.961)PDSDTELR;VTFLIGDS(0.249)MS(0.751)PDSDTELR 317.0 1.0307999999999999e-47 658147000.0 466621.0 533974.0 449982.0 374928.0 407912.0 541622.0 440273.0 521730.0 644220.0 542843.0 True False 440736.6029440984 508321.08752868534 478988.55971665645 410561.04439378635 440012.35369820305 538241.5361935204 484780.0914904034 519920.24040269724 527245.8874646268 538033.8333454634 0.8191615018030067 0.9447753208529176 0.8902573221805276 0.7630766300344747 0.8178153982663722 1.0003860404963114 0.9010215741937059 0.9663337288100696 0.9799493169160799 1.0 19.03733737150306 -6.259942704751502 24.99660498231866 0.9631517064532098 0.8501870980462128 0.579492870148512 0.0520076323489235 117.64344149631697 1964820.1613243334 0.018908787789694632 0.017958200288325458 5.496133780207347e-07 6.259942704751502 -0.11296460840699696 VTFQT(ph)PLRDPQTHR ddPTM_KYSE-520_SHP099_60min_R1 6 VTFQTPLRDPQTHR 14 1 A0A494BZT8;Q9Y6A5;E7EMT0;C9JA91;Q8IX09;C9JWI7 A0A494BZT8 TACC3;ERIC-1s Transforming acidic coiled-coil-containing protein 3 1 VTFQT(1)PLRDPQTHR;VT(0.154)FQT(0.845)PLRDPQT(0.001)HR;VTFQT(1)PLRDPQTHR;VT(0.058)FQT(0.942)PLRDPQTHR;VTFQT(1)PLRDPQTHR;VT(0.018)FQT(0.982)PLRDPQTHR 176.94 2.1484000000000002e-08 11683090000.0 6637440.0 5688850.0 5832650.0 5738700.0 4720450.0 5250140.0 5233310.0 5672490.0 7098090.0 5724300.0 True False 6269247.971791397 5415549.106862059 6208631.951569967 6284104.322596936 5091922.5593134975 5217371.928819453 5762344.046983676 5652813.4561591195 5809255.78428766 5673587.155438005 1.104988396235786 0.9545194175207792 1.0943044993358626 1.1076069073114994 0.8974785122377128 0.9195896327808625 1.015643875578892 0.9963385246917421 1.0239123195136997 1.0 22.43582974452725 -5.749112446890864 24.995956013763077 0.9745230217619687 1.0595058183957078 0.384275087666179 0.055519591972007766 272.23144322229064 552015.4750986522 0.01723593503535784 0.022084735092948202 1.7819173362885355e-06 5.749112446890864 0.08498279663373909 VTFSVS(ph)PIEATEK ddPTM_KYSE-520_SHP099_60min_R1 2 VTFSVSPIEATEK 13 0 H0YC63;Q9ULD2-5;Q9ULD2-2;Q9ULD2 H0YC63 MTUS1 Microtubule-associated tumor suppressor 1 1 VTFSVS(1)PIEATEK;VTFSVS(1)PIEATEK 223.7 1.4935e-11 311850000.0 273284.0 292857.0 269152.0 241837.0 205504.0 267313.0 175846.0 293198.0 352110.0 285209.0 True False 258124.391741852 278787.710132681 286501.9685784265 264821.11576905474 221675.99564218672 265644.60041227704 193622.22977157694 292180.9645709279 288175.69997077045 282682.2701492441 0.9131255087401605 0.9862228359263319 1.0135123381709288 0.9368154416944527 0.7841878287065945 0.9397285520313251 0.6849464937059997 1.0336020169098998 1.0194332308801186 1.0 18.108821874514653 VTFTS(ph)PADVGKEGMLMMMSPS(ph)PRVY(ph)TLNNEK ddPTM_KYSE-520_SHP099_60min_R1 1 VTFTSPADVGKEGMLMMMSPSPRVYTLNNEK 31 2 H0Y300 H0Y300 HP 3 VT(0.004)FT(0.457)S(0.484)PADVGKEGMLMMMS(0.14)PS(0.667)PRVY(0.685)T(0.563)LNNEK 43.302 0.056039 3880000000.0 1144300.0 1184300.0 1083100.0 1187800.0 1034400.0 987470.0 1116600.0 1207000.0 1396500.0 952750.0 True False 1080823.3978945035 1127404.4503294597 1152918.3590212716 1300688.1548749083 1115801.395069089 981306.8334466029 1229476.824965839 1202813.1987159185 1142930.802900176 944309.3762282833 1.1445649329581775 1.193893101890491 1.2209116927613328 1.3773962089310778 1.181605756712669 1.0391793814079164 1.3019851924763877 1.2737490794808575 1.2103351207474158 1.0 19.84890006964652 -5.917931596483459 24.006765245276075 1.1817173071458742 1.236505875765818 0.08038997788274738 0.10366009822905617 69.11117586668269 20208.022425441115 0.03318055677903213 0.037623213456135715 1.2080040867076159e-06 5.917931596483459 0.054788568619943856 VTGTEGSSSTLVDYTSTS(ph)STGGSPVRK ddPTM_KYSE-520_SHP099_60min_R1 1 VTGTEGSSSTLVDYTSTSSTGGSPVRK 27 1 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 VTGTEGSSSTLVDYT(0.024)S(0.162)T(0.129)S(0.389)S(0.028)T(0.018)GGS(0.249)PVRK 194.03 1.2517000000000002e-15 1797600000.0 245790.0 333130.0 265780.0 224450.0 188610.0 230670.0 220080.0 269140.0 413440.0 299310.0 True False 232155.53872978257 317125.93476167583 282912.6040630358 245781.6605166471 203452.53395589755 229230.30296730826 242327.8341738148 268206.4161577483 338369.7179742562 296658.3462596564 0.7825687079324024 1.068993806377201 0.9536647380060921 0.8285007437529553 0.6858142928425195 0.7727080861115219 0.8168583059574946 0.9040919277659394 1.140604072801279 1.0 18.178442846946602 -7.61847414024838 5.218826300875238 1.0667222797228675 0.8483754604447328 0.4231377519960088 0.1038692676729718 0.22353757924165749 9.580485550485145 0.08283072448196954 0.0295440635899526 2.4072758542868375e-08 7.61847414024838 -0.2183468192781347 VTGTEGSSSTLVDYTSTSSTGGS(ph)PVRK ddPTM_KYSE-520_SHP099_60min_R1 3 VTGTEGSSSTLVDYTSTSSTGGSPVRK 27 1 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 VTGTEGSSSTLVDYTSTS(0.006)S(0.002)T(0.004)GGS(0.988)PVRK;VTGTEGSSSTLVDYTS(0.004)T(0.022)S(0.083)S(0.318)T(0.211)GGS(0.362)PVRK;VTGTEGSSSTLVDYTS(0.001)T(0.023)S(0.109)S(0.057)T(0.037)GGS(0.774)PVRK 281.12 6.4914e-43 5441900000.0 1237430.0 1358080.0 1004580.0 945780.0 818410.0 1093670.0 1069490.0 1383250.0 1453870.0 1207950.0 True False 1168787.2911444528 1292835.7982803609 1069336.8341848296 1035666.6468408738 882814.210884081 1086843.999853712 1177604.4864165448 1378451.8286029773 1189883.8570801865 1197248.5027708795 0.9762278160627832 1.0798391439106056 0.893161972397531 0.8650389993756141 0.7373692335725788 0.907784806026777 0.9835923650696817 1.1513498036645906 0.9938486908326479 1.0 20.191291200724876 -6.961542492643263 4.288644039466601 1.0573030418808163 0.9079940799525019 0.31999040281469093 0.09044761084177191 0.2575940144413604 10.530233805756804 0.0452304412327743 0.028706339475751037 1.0925907196849633e-07 6.961542492643263 -0.14930896192831433 VTHTGQVYDDKDYR ddPTM_KYSE-520_SHP099_60min_R1 2 VTHTGQVYDDKDYR 14 1 D6RBT3;O75380 D6RBT3 NDUFS6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial 0 ; 212.24 9.3574e-14 1200010000.0 1726020.0 1654260.0 994490.0 1223120.0 1645220.0 1866810.0 1448590.0 1451900.0 1446110.0 1421080.0 False True 1630274.2298644327 1574786.8665051162 1058596.4166402589 1339364.9570555629 1774689.4539786961 1855158.5463319896 1595027.6140760027 1446863.6977760086 1183532.8774665042 1408490.3367835095 1.1574621332421766 1.1180672137952816 0.7515823069526456 0.950922361394538 1.2599940572055717 1.3171255051479525 1.1324377401966974 1.0272443196735948 0.840284698132379 1.0 20.425718235186586 -7.554554916275918 6.1101944590720745 0.9216373125868144 1.0938181934673505 0.17613536943461638 0.1529618425554519 0.3636419335698627 40.13826148393064 0.11753927731802556 0.04426932433810327 2.788977969455846e-08 7.554554916275918 0.17218088088053618 VTIMPKDIQLAR ddPTM_KYSE-520_SHP099_60min_R1 8 VTIMPKDIQLAR 12 1 Q71DI3;P68431;K7EK07;Q16695;P84243;Q6NXT2 Q71DI3 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A;H3F3C Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3;Histone H3.3C 0 ;;;;;;; 188.48 1.0144e-07 58906000000.0 12038070.0 11625280.0 52736300.0 9518310.0 23383430.0 8956070.0 21065760.0 9217040.0 54928000.0 11906460.0 False True 11370294.2598024 11066784.098898975 56135766.279063344 10422927.320615755 25223572.90748293 8900171.845044518 23195292.6028053 9185068.239513313 44954459.82219899 11800978.027485713 0.9635044005098385 0.9377853321244456 4.756874061481791 0.8832257204733087 2.1374137676330376 0.7541893412829924 1.9655398517632214 0.7783311025679674 3.809384249127093 1.0 23.492403094725134 VTIMPKDIQLARR ddPTM_KYSE-520_SHP099_60min_R1 2 VTIMPKDIQLARR 13 2 Q71DI3;P68431;K7EK07;Q16695;P84243;Q6NXT2 Q71DI3 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A;H3F3C Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3;Histone H3.3C 0 ; 115.12 8.7131e-05 5803890000.0 967060.0 1044590.0 6008500.0 775420.0 2326270.0 792810.0 1720400.0 928700.0 5805800.0 1019980.0 False True 913415.2540136833 994406.3284384431 6395817.523939918 849115.6836614759 2509334.214334267 787861.7787120618 1894314.8214859664 925478.5564602094 4751613.072307799 1010943.7707324326 0.9035272588424087 0.9836415804985791 6.326580873341871 0.8399237507010784 2.4821699158561956 0.7793329377174488 1.873808293129427 0.915459972407463 4.700175429999669 1.0 19.947271325277814 VTKNEEPS(ph)EEEIDAPKPK ddPTM_KYSE-520_SHP099_60min_R1 12 VTKNEEPSEEEIDAPKPK 18 2 Q9NR30;Q9NR30-2 Q9NR30 DDX21 Nucleolar RNA helicase 2 1 VT(0.002)KNEEPS(0.998)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK;VT(0.008)KNEEPS(0.992)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK;VT(0.005)KNEEPS(0.995)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK;VTKNEEPS(1)EEEIDAPKPK 184.47 1.4345e-12 47628190000.0 23933410.0 26713980.0 26591530.0 18154180.0 18954290.0 18543930.0 16686710.0 16141960.0 28469240.0 18277340.0 True False 22605776.03723003 25430600.302298546 28305662.571752306 19879547.808946744 20445884.787842266 18428190.454348426 18373565.493395757 16085967.308321802 23299943.667137712 18115416.987155367 1.2478750035540738 1.4038098223369613 1.5625178593361817 1.097382843742555 1.1286455510430318 1.0172655957858894 1.0142502105484754 0.8879711308730827 1.286194167302823 1.0 24.110714678856027 -5.3753441031315266 5.90635530578558 1.0521943521618928 1.4031083381605653 0.6339199763649637 0.1196430377457801 0.14229805761268094 6.433061227796053 0.03372616269882174 0.05037106404656178 4.213625143439992e-06 5.3753441031315266 0.3509139859986725 VTKS(ph)PAPVHR ddPTM_KYSE-520_SHP099_60min_R1 2 VTKSPAPVHR 10 1 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2;B0QYZ7 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 VT(0.014)KS(0.986)PAPVHR;VT(0.018)KS(0.982)PAPVHR 99.941 0.0014116 15399500000.0 12018500.0 10324800.0 10321000.0 10073300.0 9728600.0 9042500.0 9021400.0 9083900.0 11709600.0 8870000.0 True False 11351809.846714234 9828781.110159243 10986308.174183866 11030663.403351912 10494185.471837915 8986062.403354932 9933371.152379379 9052390.071098194 9583431.814994566 8791418.700755581 1.2912375389126443 1.1179971566266664 1.2496627163531233 1.2547080032036102 1.1936850955507317 1.0221401925246287 1.12989398986601 1.0296847845866086 1.0900893406624934 1.0 23.067664566022778 -6.16274755033457 4.949742286063521 1.0612538176872321 1.2219515310668687 0.7036272501673478 0.0543400687273513 0.13171469292251337 5.14785831247193 0.017460499349195514 0.017455539232252747 6.874679399548629e-07 6.16274755033457 0.16069771337963656 VTKS(ph)PGETSKPR ddPTM_KYSE-520_SHP099_60min_R1 3 VTKSPGETSKPR 12 2 F2Z2K0;Q9UNZ2;Q9UNZ2-5;Q9UNZ2-4;Q9UNZ2-6 F2Z2K0 NSFL1C NSFL1 cofactor p47 1 VT(0.138)KS(0.86)PGET(0.001)S(0.001)KPR;VT(0.148)KS(0.851)PGET(0.001)SKPR;VT(0.031)KS(0.686)PGET(0.229)S(0.054)KPR 95.236 0.0012993 4636400000.0 3617690.0 3455130.0 3667580.0 2817540.0 3118250.0 3025190.0 2791370.0 2716760.0 4418100.0 2859710.0 True False 3417009.5240137763 3289140.3685441343 3903998.0751354843 3085318.1544757104 3363638.534584475 3006308.6670727455 3073548.92074592 2707336.1936565526 3615884.4112375746 2834375.194220711 1.2055600581676895 1.1604463570139512 1.377375191222296 1.0885355477167145 1.1867301624156645 1.0606600965188402 1.084383227390955 0.9551791869957121 1.2757253939458546 1.0 21.434599313823547 -5.793996362938663 1.5208759581215243 1.075057283418581 1.231970736299737 0.29438024416260966 0.10200547971563102 0.48215363380035153 2.319447577434687 0.036760649487404484 0.048820310611826484 1.6069547106288928e-06 5.793996362938663 0.156913452881156 VTKS(ph)PGETSKPRPFAGGGYR ddPTM_KYSE-520_SHP099_60min_R1 1 VTKSPGETSKPRPFAGGGYR 20 3 F2Z2K0;Q9UNZ2;Q9UNZ2-5;Q9UNZ2-6 F2Z2K0 NSFL1C NSFL1 cofactor p47 1 VT(0.016)KS(0.984)PGETSKPRPFAGGGYR 135.69 1.8343000000000002e-06 831000000.0 788120.0 907810.0 953300.0 593330.0 609800.0 681970.0 527100.0 484740.0 1078100.0 508530.0 True False 744401.4125217311 864197.4449494091 1014751.2433339308 649719.9048088314 657787.7907126159 677713.5722660737 580384.4120002631 483058.5500791665 882344.2166893516 504024.8198303536 1.4769141979402607 1.7145930338118738 2.0132961779054437 1.2890633144366113 1.305070236291174 1.3446035703046941 1.1514996666148523 0.9584023069374956 1.7505967602673496 1.0 18.943135252932866 -5.359621877306081 7.599203912490831 1.2542557349224521 1.7317358942626548 0.4594559587657904 0.23767890085663343 0.2408996304749653 16.436392451783707 0.06553026845827319 0.09741695087823869 4.368960544723192e-06 5.359621877306081 0.4774801593402027 VTLATLK ddPTM_KYSE-520_SHP099_60min_R1 2 VTLATLK 7 0 P06748;P06748-3;P06748-2;E5RI98 P06748;E5RI98 NPM1 Nucleophosmin 0 ; 173.59 0.00374 1578790000.0 2332900.0 3265600.0 2448500.0 2013730.0 3205700.0 3535500.0 2647500.0 2864900.0 2848700.0 3135400.0 False True 2203489.3864791477 3108715.6742344643 2606334.2277385127 2205114.2937500007 3457970.35206204 3513433.63307286 2915135.1371100284 2854962.3305726843 2331447.88988309 3107622.7953042844 0.7090594745954011 1.0003516768289353 0.8386906646703601 0.7095823524920712 1.11273812165593 1.1305856162407382 0.9380595165909097 0.9186965467258839 0.7502351615537062 1.0 21.56737996870375 -5.757662196451353 24.999999966791336 0.9769143229458437 0.8294353690432444 0.27978689990262695 0.1253122483536489 154.47186019248304 1022393.5776404913 0.03991544151586003 0.049561546129774224 1.747180619032184e-06 5.757662196451353 -0.14747895390259924 VTLDWAKPK ddPTM_KYSE-520_SHP099_60min_R1 2 VTLDWAKPK 9 1 P19338;H7BY16 P19338 NCL Nucleolin 0 ; 91.867 0.0042214 1577320000.0 3190200.0 2465100.0 1629380.0 1844790.0 3083800.0 2618800.0 2224710.0 2620800.0 2058170.0 2431450.0 False True 3013233.246493966 2346672.8958094614 1734412.4419001774 2020118.2869436638 3326477.5155781615 2602455.097805463 2449605.397877262 2611709.056499316 1684458.2102435068 2409909.2446394763 1.2503513371702706 0.9737598629613643 0.7197003147558971 0.8382549224362491 1.3803331071398102 1.0798975536503208 1.0164720531804607 1.0837375151403383 0.6989716372059905 1.0 21.200547385997695 -7.740071114532106 24.988908056887535 0.8494856034454193 1.0345312791261687 0.1421389139500664 0.1891052412545361 443.1559639723324 518247.72712757275 0.13502146044183186 0.05092679260128743 1.819402911972235e-08 7.740071114532106 0.18504567568074937 VTLT(ph)PLK ddPTM_KYSE-520_SHP099_60min_R1 1 VTLTPLK 7 0 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 VTLT(1)PLK 115.82 0.012916 231790000.0 649270.0 567740.0 493050.0 385770.0 401330.0 651990.0 499050.0 641300.0 649070.0 694310.0 True False 613253.6988123439 540464.9182048864 524832.791907893 422433.4648140201 432912.38774466095 647920.6885665893 549498.8442586446 639075.4799805445 531215.2497231774 688158.9535650053 0.8911512313185566 0.7853780226283615 0.7626621570336306 0.6138603045497044 0.6290877790690068 0.9415276589951176 0.7985056961214666 0.9286742207884036 0.7719368424565553 1.0 19.392382317028645 -6.2716584384914595 24.998194421352327 0.8780695732849395 0.733795496116765 0.3808510422369018 0.09625611372271566 850.6774255916954 2080948.736088452 0.034932644653799055 0.031148609482398358 5.349849459696678e-07 6.2716584384914595 -0.14427407716817453 VTLYNTDQDGSDS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 5 VTLYNTDQDGSDSPR 15 0 C9JXI1;C9JVP0;Q9UPW0-2;Q9UPW0 C9JXI1 FOXJ3 Forkhead box protein J3 1 VTLYNTDQDGS(0.016)DS(0.984)PR;VTLYNTDQDGS(0.001)DS(0.999)PR;VTLYNTDQDGS(0.003)DS(0.997)PR;VTLYNTDQDGS(0.004)DS(0.996)PR;VTLYNTDQDGSDS(1)PR 295.79 3.3395e-29 1023050000.0 2090213.0 1980220.0 1882978.0 1607258.0 1831170.0 2043054.0 1704399.0 1884409.0 2206768.0 1874880.0 True False 1974264.7181536865 1885087.2588291834 2004357.7747513214 1760011.3170802605 1975272.661067925 2030302.5421535983 1876696.2842512534 1877872.4250033677 1806074.5592942464 1858270.021834568 1.0624207972771382 1.0144312918356937 1.0786149220512793 0.947123559224562 1.062963206562331 1.0925767075277855 1.009915815355238 1.010548737771407 0.971911798647652 1.0 20.825528721667574 -6.985076045352367 24.919821540096333 0.9967846001891006 1.0408340438397665 0.24491279641619024 0.03918876439341329 358.5034569885201 598623.3287758923 0.01654201221475512 0.011148140882793431 1.0349609282277345e-07 6.985076045352367 0.044049443650665876 VTMILQS(ph)PSFR ddPTM_KYSE-520_SHP099_60min_R1 3 VTMILQSPSFR 11 0 P35612;P35612-4;P35612-3;A0A1C7CYY0;P35612-5;P35612-6;P35612-2;P35612-8;P35612-9;C9J299;C9J080;C9JTM0;P35612-7 P35612 ADD2 Beta-adducin 1 VTMILQS(0.999)PS(0.001)FR;VTMILQS(0.999)PS(0.001)FR;VTMILQS(1)PSFR 253.06 7.1337e-15 2227264000.0 1076733.0 1013254.0 880607.0 921896.0 874577.0 1000416.0 942934.0 1093405.0 1169896.0 1051325.0 True False 1017004.4740759799 964575.7569147394 937372.3362410178 1009512.7186618617 943401.234237566 994172.0326585268 1038254.9708690111 1089612.2332576462 957472.3770781998 1042011.0784184732 0.9760015945507533 0.9256866619678723 0.8995800099013608 0.9688118865243387 0.90536583897882 0.954089695636869 0.9963953285840655 1.0456820045631572 0.9188696712624368 1.0 19.990939185418934 -6.634608556828213 4.113653300775509 0.9938808961063607 0.9340835939895111 0.33204820738600827 0.036668770121727014 0.23963578055236967 7.369863262184175 0.01411952819244755 0.010680080109519357 2.3194843317034893e-07 6.634608556828213 -0.05979730211684953 VTNDIS(ph)PESS(ph)PGVGR ddPTM_KYSE-520_SHP099_60min_R1 2 VTNDISPESSPGVGR 15 0 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154;E9PGW9;E7EV93;E5RGQ4;Q15154-3 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 2 VTNDIS(1)PES(0.001)S(0.999)PGVGR;VTNDIS(1)PES(0.003)S(0.997)PGVGR 266.29 2.4730999999999998e-20 0.0 1137270.0 1063720.0 1011290.0 956760.0 1037520.0 941440.0 899830.0 964910.0 1213780.0 889870.0 True False 1074183.3660084626 1012617.2945237295 1076479.3715212115 1047690.182739617 1119166.9213187178 935564.1237505625 990793.5978945099 961562.9524216859 993388.1489038137 881986.444108383 1.2179136915129973 1.1481098165260393 1.2205169123766353 1.187875607089117 1.2689162387865327 1.0607466021729417 1.1233660160118697 1.0902241852410195 1.1263077290355055 1.0 19.750396956559854 -6.272686172630855 24.9931334800082 1.0884702337170122 1.2048055084584632 0.6795569495092748 0.04390664797859553 468.9863882327995 1042199.7098094843 0.014732549349458451 0.013114207128310287 5.337204301478099e-07 6.272686172630855 0.116335274741451 VTNDIS(ph)PESSPGVGR ddPTM_KYSE-520_SHP099_60min_R1 2 VTNDISPESSPGVGR 15 0 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154;E9PGW9;E7EV93;E5RGQ4;Q15154-3 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 1 VTNDIS(0.754)PES(0.245)S(0.001)PGVGR;VTNDIS(0.494)PES(0.491)S(0.015)PGVGR 257.5 6.622700000000001e-25 1949300000.0 2744470.0 2865010.0 2273340.0 1906140.0 2127580.0 2885210.0 2458620.0 2542760.0 2932730.0 2875160.0 True False 2592228.7781346925 2727370.6191323134 2419883.1338726087 2087298.9724981093 2295008.4417257234 2867202.3341756947 2707161.3034188687 2533939.7590446444 2400220.160107007 2849688.3192406325 0.9096534384593519 0.9570768145826862 0.8491746685186414 0.7324657080583185 0.8053541947834082 1.006145940528587 0.9499850510459532 0.8891989141183949 0.8422746248777842 1.0 21.44237270443472 -6.247883035035469 24.905604383488885 0.931374851497111 0.8499939831981209 0.26684092207215093 0.07155165531534519 1281.1315134442925 2353685.9730084934 0.026417809063587535 0.026269775734922046 5.650891451365272e-07 6.247883035035469 -0.08138086829899005 VTNDISPES(ph)SPGVGR ddPTM_KYSE-520_SHP099_60min_R1 3 VTNDISPESSPGVGR 15 0 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154;E9PGW9;E7EV93;E5RGQ4;Q15154-3 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 1 VT(0.007)NDIS(0.014)PES(0.49)S(0.49)PGVGR;VTNDIS(0.093)PES(0.876)S(0.03)PGVGR;VTNDIS(0.043)PES(0.933)S(0.024)PGVGR 232.62 1.3880000000000002e-18 3840160000.0 4021300.0 4245400.0 3375980.0 2912090.0 3272350.0 3946000.0 3470610.0 4042600.0 4560700.0 4196700.0 True False 3798230.4727371875 4041444.611524685 3593601.0725589846 3188854.1580482153 3529865.3278754186 3921371.550305625 3821453.128689497 4028577.164149936 3732591.845891037 4159520.502983193 0.9131414233955838 0.9716131002662868 0.8639459932897715 0.7666398460498466 0.8486231346482875 0.9427460563046225 0.9187244361336275 0.9685196073106636 0.8973610884269078 1.0 21.987985797729195 -6.273804289745774 23.263856443153852 0.941831114345935 0.8718938592331018 0.304953977550525 0.05471437332209359 458.0566529523026 861803.0392586729 0.021230630430994917 0.018882465229785338 5.323481023114241e-07 6.273804289745774 -0.06993725511283322 VTNGAFTGEIS(ph)PGMIK ddPTM_KYSE-520_SHP099_60min_R1 7 VTNGAFTGEISPGMIK 16 0 P60174;P60174-3 P60174 TPI1 Triosephosphate isomerase 1 VTNGAFT(0.002)GEIS(0.998)PGMIK;VTNGAFTGEIS(1)PGMIK;VTNGAFTGEIS(1)PGMIK;VTNGAFTGEIS(1)PGMIK;VTNGAFT(0.001)GEIS(0.999)PGMIK;VTNGAFTGEIS(1)PGMIK;VTNGAFTGEIS(1)PGMIK 232.54 6.3723e-23 3279666000.0 3278510.0 4075990.0 2842040.0 2516590.0 2679930.0 3857200.0 2812570.0 3479390.0 4064390.0 3992920.0 True False 3096644.514752345 3880173.3222142784 3025242.4458247754 2755765.9569596294 2890825.2442841236 3833125.7840443086 3096892.0236379793 3467320.808185728 3326399.2309340867 3957545.8352447534 0.7824658623469446 0.980449370329102 0.7644238555325993 0.6963320380063772 0.730459068481096 0.9685613113833336 0.7825284033498636 0.8761290336315947 0.840520708897454 1.0 21.91617462869418 -6.250431863848584 24.672622043001912 0.8788672417794926 0.7946442192858171 0.2334361379496781 0.09102058168997237 1197.5465304205002 2684221.8479885855 0.031510581829365544 0.031218983261672266 5.617824090834301e-07 6.250431863848584 -0.08422302249367553 VTPFNYNPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 VTPFNYNPSPR 11 0 P25054-2;P25054-3;P25054 P25054-2 APC Adenomatous polyposis coli protein 1 VTPFNYNPS(1)PR;VTPFNYNPS(1)PR;VTPFNYNPS(1)PR 130.78 0.00014558 1277560000.0 947830.0 953590.0 823420.0 1000960.0 774850.0 828810.0 732840.0 671880.0 945800.0 801340.0 True False 895251.9804477396 907778.1050322296 876498.9707185822 1096090.937450401 835826.2867065765 823637.0893585401 806922.6190291649 669549.405097971 774066.561677756 794240.7510330853 1.1271796105692977 1.1429508040873801 1.103568369639183 1.3800487270700892 1.0523588541879776 1.0370118736506764 1.015967284453214 0.8430056053244237 0.9745994028522356 1.0 19.599216859229035 -6.3787320033924475 1.7018303579774825 0.9433212449060592 1.17637920689064 0.5574932267092342 0.08816020305720129 0.27315828009985316 1.5715968581970217 0.0399480770666924 0.03337507420677029 4.1808828306570924e-07 6.3787320033924475 0.23305796198458084 VTPPEGY(ph)EVVTVFPK ddPTM_KYSE-520_SHP099_60min_R1 1 VTPPEGYEVVTVFPK 15 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 VTPPEGY(1)EVVTVFPK 190.66 9.031299999999998e-09 80600000.0 111880.0 134060.0 98519.0 98793.0 102530.0 87477.0 74385.0 103320.0 98565.0 108760.0 True False 105673.79337274932 127619.55637183756 104869.69237597335 108182.25701680133 110598.52768410057 86931.0235950545 81904.56172764106 102961.6070350692 80668.08062145073 107796.47101399957 0.9803084681596433 1.1838936392942174 0.9728490310443825 1.0035788370358771 1.0259939554954178 0.8064366372788283 0.7598074496984607 0.9551482165097737 0.7483369340632157 1.0 16.717950423084385 -6.250916096288817 21.841240863547412 0.8452589660687594 1.0366774902640135 0.4867711087645501 0.09184620067380685 104.4622440387388 216812.264581901 0.029350608566072862 0.028957497755555076 5.61156378411126e-07 6.250916096288817 0.19141852419525407 VTPTEEHVEGPLPS(ph)PVTNGTSPAQLNGGSACSSR ddPTM_KYSE-520_SHP099_60min_R1 2 VTPTEEHVEGPLPSPVTNGTSPAQLNGGSACSSR 34 0 H3BN50;Q15599-3;H3BUQ9;H3BQS0;Q15599-2;Q15599 H3BN50 SLC9A3R2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2 1 VTPTEEHVEGPLPS(1)PVTNGTSPAQLNGGSACSSR;VTPTEEHVEGPLPS(1)PVTNGTSPAQLNGGSACSSR 223.92 7.094499999999999e-23 529360000.0 162818.0 197727.0 176148.0 119914.0 136051.0 176654.0 163111.0 187008.0 204463.0 226507.0 True False 153786.1609703637 188227.89812572204 187502.78192676484 131310.59050654122 146757.43967570027 175551.43685952594 179599.8516899545 186359.31289599548 167337.6732927883 224500.3241997796 0.6850153179890806 0.8384304067116658 0.8352004951222646 0.5849015629469195 0.6537070278130331 0.7819651819447051 0.7999981841012006 0.830107099222525 0.7453783146605922 1.0 17.77635800279333 -9.057511834271342 0.47663511571031203 1.0299991766237495 0.7332194198458162 0.4819894420300309 0.07943303625606536 4.422120072088629 1.2237064683413297 0.34461630170299934 0.04671158129199707 8.75967847694932e-10 9.057511834271342 -0.29677975677793333 VTQDELK ddPTM_KYSE-520_SHP099_60min_R1 2 VTQDELK 7 0 P19338;H7BY16 P19338 NCL Nucleolin 0 ; 174.69 0.010919 252730000.0 1303560.0 1623800.0 1246240.0 1020540.0 1419640.0 1484110.0 1269240.0 1451610.0 1462240.0 1435400.0 False True 1231248.9282175647 1545790.2106265076 1326574.624454503 1117531.81476346 1531357.591353324 1474847.1189873489 1397547.1657886829 1446574.7037183193 1196734.0760707166 1422683.472724303 0.8654412255593584 1.086531361516745 0.9324453751573 0.7855098032617849 1.076386716168791 1.0366656724866268 0.9823317642908395 1.016793075516838 0.841180838193815 1.0 20.44018328731887 VTQDFTHPPDQS(ph)PLRPDAANR ddPTM_KYSE-520_SHP099_60min_R1 10 VTQDFTHPPDQSPLRPDAANR 21 1 Q9BYX2-2;Q9BYX2;Q9BYX2-3;Q9BYX2-4 Q9BYX2-2 TBC1D2 TBC1 domain family member 2A 1 VTQDFTHPPDQS(1)PLRPDAANR;VTQDFTHPPDQS(1)PLRPDAANR;VTQDFTHPPDQS(1)PLRPDAANR;VTQDFTHPPDQS(1)PLRPDAANR;VTQDFT(0.001)HPPDQS(0.999)PLRPDAANR;VTQDFTHPPDQS(1)PLRPDAANR;VTQDFTHPPDQS(1)PLRPDAANR;VTQDFTHPPDQS(1)PLRPDAANR;VTQDFT(0.001)HPPDQS(0.999)PLRPDAANR;VTQDFTHPPDQS(1)PLRPDAANR 194.19 1.7223e-13 15855820000.0 2655120.0 2311150.0 2356890.0 2352570.0 2335190.0 2310440.0 2343700.0 2453270.0 2917610.0 2289285.0 True False 2507835.2007494993 2200118.884893123 2508818.9005573317 2576157.545474041 2518956.16758641 2296019.686945796 2580624.068307756 2444760.178967524 2387845.5709628263 2269003.715936781 1.105258304838921 0.9696409351118149 1.1056918430481903 1.1353694695957994 1.1101595602924932 1.0119065344932066 1.1373379647561834 1.0774597510776576 1.0523762275889357 1.0 21.113627541031285 -9.550354042585564 13.620740923633292 1.000000000380759 1.078328465611284 0.17459808912512442 0.05110979546223568 0.0 0.0 0.04967032737565627 0.012046823895814077 2.8160862846086526e-10 9.550354042585564 0.07832846523052495 VTQGAAS(ph)PGHGIQEK ddPTM_KYSE-520_SHP099_60min_R1 5 VTQGAASPGHGIQEK 15 0 G5E9C0;Q9HB58-2;Q9HB58-5;Q9HB58-3;Q9HB58-7;Q9HB58;Q9HB58-6;Q9HB58-4 G5E9C0 SP110 Sp110 nuclear body protein 1 VTQGAAS(1)PGHGIQEK;VTQGAAS(1)PGHGIQEK;VTQGAAS(1)PGHGIQEK;VTQGAAS(1)PGHGIQEK;VTQGAAS(1)PGHGIQEK 265.29 4.463699999999999e-25 6737000000.0 6825210.0 7027260.0 5478190.0 5741250.0 5259190.0 6881630.0 5625170.0 6917100.0 7621050.0 6628410.0 True False 6446601.995581188 6689659.881467694 5831322.892813905 6286896.673830251 5673058.332302202 6838679.194558964 6193817.079968735 6893106.194563279 6237259.431036444 6569687.4442249425 0.9812646416304094 1.0182615136962434 0.8876103988691131 0.9569552170030132 0.8635202786228561 1.0409443756065562 0.942787177099785 1.049228940202115 0.9493997216746258 1.0 22.647393304652155 -6.2898147475912065 24.998096059488283 0.9961935388212765 0.943647924559727 0.22058165658140805 0.05156716172145519 1210.828808650397 1066710.8653934419 0.017906155383325885 0.01579492779495002 5.130801965184734e-07 6.2898147475912065 -0.05254561426154947 VTQHES(ph)DNENEIQIQNK ddPTM_KYSE-520_SHP099_60min_R1 1 VTQHESDNENEIQIQNK 17 0 Q5VZL5-2;Q5VZL5-4;Q5VZL5 Q5VZL5-2 ZMYM4 Zinc finger MYM-type protein 4 1 VTQHES(1)DNENEIQIQNK 326.85 1.7688e-44 0.0 105770.0 91204.0 83883.0 94504.0 92704.0 91292.0 98497.0 97773.0 102520.0 85748.0 True False 99902.72725273238 86822.42294000498 89290.23239754535 103485.63174633635 99999.27738639283 90722.2127649521 108454.03799808366 97433.84828338964 83904.95231888742 84988.33943093459 1.1754874600640703 1.0215804135173254 1.0506174493514686 1.2176450609490201 1.1766234998350193 1.0674665886215735 1.2761049189132394 1.1464378400117918 0.9872525205304478 1.0 16.374977293750824 -7.761407745225916 24.99999999999292 0.9936261877505627 1.140197597237925 0.3906640920540142 0.07385510345632183 0.8885708618085555 706762.8484624048 0.06077771577832265 0.019561339066292628 1.7321769484373697e-08 7.761407745225916 0.14657140948736236 VTQILQS(ph)PAFR ddPTM_KYSE-520_SHP099_60min_R1 1 VTQILQSPAFR 11 0 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 VTQILQS(1)PAFR 134.06 8.3652e-05 0.0 337290.0 311200.0 246700.0 228530.0 241260.0 278710.0 263200.0 294220.0 307370.0 291890.0 True False 318579.8513290546 296249.4848792767 262602.6767339559 250249.42248994985 260245.7894183759 276970.4675077751 289806.8245844604 293199.4194914645 251559.3561671516 289304.0816869836 1.1011937663352651 1.0240072768824873 0.9077047071118837 0.8650048109611899 0.8995579595726282 0.9573679911210068 1.0017377663479383 1.0134645103579822 0.8695326892737365 1.0 18.1422271523121 -4.534606141830319 3.5993027105400315 0.9388765780080655 1.0919352911808322 0.5019337623637162 0.05170700781806806 0.1943727128541193 5.22773060640907 0.014484590381482846 0.05569364845018114 2.9200740051617076e-05 4.534606141830319 0.15305871317276676 VTQQEKT(ph)PPPRPSPLEAGSDGCEEPK ddPTM_KYSE-520_SHP099_60min_R1 4 VTQQEKTPPPRPSPLEAGSDGCEEPK 26 2 Q9BUA3 Q9BUA3 C11orf84 Uncharacterized protein C11orf84 1 VT(0.398)QQEKT(0.602)PPPRPSPLEAGSDGCEEPK;VT(0.043)QQEKT(0.952)PPPRPS(0.004)PLEAGS(0.001)DGCEEPK;VT(0.113)QQEKT(0.885)PPPRPS(0.001)PLEAGSDGCEEPK;VT(0.173)QQEKT(0.774)PPPRPS(0.022)PLEAGS(0.031)DGCEEPK 168.87 2.4813e-10 5482720000.0 2250420.0 2525220.0 1894670.0 1545340.0 1691030.0 2237130.0 1583150.0 2050390.0 2736910.0 2138470.0 True False 2125584.7164989486 2403904.6407675017 2016803.4597791827 1692208.648976587 1824104.4403554527 2223167.241848761 1743190.2520550503 2043277.6756546218 2239956.1358865206 2119524.819504484 1.0028590828183277 1.134171498557635 0.9515356655510567 0.7983905795319737 0.860619523569393 1.0488988953516984 0.8224438968648569 0.9640263029013797 1.056819960433486 1.0 21.015309429685754 -1.7075235569558225 11.819215442325875 0.9583161827518729 1.0493131832394784 0.0 0.10306096227078548 0.0 0.0 0.02492227558896077 0.0 0.019609948045162962 1.7075235569558225 0.0909970004876055 VTQTPRHKVT(ph)EMGQEVT(ph)MR ddPTM_KYSE-520_SHP099_60min_R1 2 VTQTPRHKVTEMGQEVTMR 19 2 A0A1B0GX78 A0A1B0GX78 2 VT(0.222)QT(0.27)PRHKVT(0.508)EMGQEVT(1)MR;VT(0.23)QT(0.276)PRHKVT(0.494)EMGQEVT(1)MR 49.577 0.028381 2301740000.0 23701.0 0.0 18675.0 32034.0 41013.0 17794.0 13308.0 12391.0 34735.0 22322.0 True False 22386.25828322785 0.0 19878.820381056466 35078.50172862671 44240.489767951 17682.941045650834 14653.302513563835 12348.018513081142 28427.999598093546 22124.244446253215 1.011842837734466 0.0 0.8985084407898496 1.5855231492240778 1.9996384453003646 0.79925626787429 0.662318776542238 0.5581215911385532 1.284925217091781 1.0 14.433340566846509 -3.8845359921793556 20.583168960059428 0.9670614647481851 11.68831169880711 0.00011794977820089869 0.5271620526485411 28019.851670667995 5112402.324635328 0.13997843197721063 333345.49324908294 0.00013045598486896765 3.8845359921793556 10.721250234058925 VTRS(ph)PPETAAPVEDMAR ddPTM_KYSE-520_SHP099_60min_R1 3 VTRSPPETAAPVEDMAR 17 1 Q9Y3L3;A0A2R8Y5V0;Q6ZT62-2;Q6ZT62;A0A3B3IU28 Q9Y3L3 SH3BP1 SH3 domain-binding protein 1 1 VTRS(0.929)PPET(0.071)AAPVEDMAR;VT(0.053)RS(0.947)PPETAAPVEDMAR;VT(0.017)RS(0.609)PPET(0.374)AAPVEDMAR 190.25 1.2884999999999998e-09 636190000.0 661650.0 690780.0 667470.0 494270.0 593980.0 674010.0 525760.0 589180.0 797850.0 594350.0 True False 624946.9555334256 657593.8919180816 710496.1841897606 541245.2721923054 640722.8467161035 669803.2535786856 578908.9517231229 587136.2720956465 652980.5521617658 589084.5213973027 1.0608782489328652 1.1162980320010365 1.2061022796940422 0.9187905173751245 1.0876586015132688 1.1370240249903678 0.982726469115088 0.9966927508177689 1.1084666604596947 1.0 19.168115120126657 -5.245066872969597 24.979527587770672 1.037424112873522 1.1266133563609149 0.27882955213086713 0.06954284474179392 1187.600848099366 1811919.4616379996 0.019046135829171508 0.03286215526222222 5.68765345213115e-06 5.245066872969597 0.08918924348739288 VTRS(ph)PPTQVAISSDSAR ddPTM_KYSE-520_SHP099_60min_R1 6 VTRSPPTQVAISSDSAR 17 1 Q6ZUT6-4;Q6ZUT6;H0YM82;Q6ZUT6-3 Q6ZUT6-4 C15orf52 Uncharacterized protein C15orf52 1 VT(0.174)RS(0.822)PPT(0.004)QVAISSDSAR;VT(0.034)RS(0.966)PPTQVAISSDSAR;VT(0.008)RS(0.991)PPTQVAISSDSAR;VT(0.41)RS(0.59)PPTQVAISSDSAR;VT(0.115)RS(0.884)PPT(0.001)QVAISSDSAR;VT(0.005)RS(0.994)PPT(0.001)QVAISSDSAR 223.07 1.8088e-18 11033940000.0 727160.0 702331.0 787474.0 562076.0 694285.0 711067.0 629906.0 596871.0 973087.0 608555.0 True False 686822.9852424785 668589.9645396769 838235.8340429488 615495.5340456888 748921.2795587209 706628.967096089 693583.045770135 594800.5938117381 796398.930327049 603163.6761486251 1.1387008409194042 1.108471864235621 1.389731953680181 1.0204452926870633 1.2416551413387495 1.1715376688598356 1.1499085127255404 0.9861346386269682 1.3203695146436651 1.0 19.20219002337137 -13.995051568665962 0.2518478828725208 1.36085992758758e-10 1.1803111659165126 0.14536186910101545 0.11812843205010372 353.30381306288706 3.5100281634837125 182.33989897724948 0.1607094992811596 1.0114593451907042e-14 13.995051568665962 1.1803111657804266 VTS(ph)GGVSESPSGFSK ddPTM_KYSE-520_SHP099_60min_R1 1 VTSGGVSESPSGFSK 15 0 E7EPP6;O14757-2;O14757-3;O14757 E7EPP6 CHEK1 Serine/threonine-protein kinase Chk1 1 VTS(0.998)GGVS(0.001)ESPSGFSK 224.42 1.7587e-14 561680000.0 693140.0 652590.0 582980.0 611890.0 689380.0 859800.0 809950.0 1011300.0 1200500.0 1038100.0 True False 654690.1424596668 621238.5968424397 620559.82360098 670043.841628563 743630.2839643534 854433.6692733834 891827.6503502426 1007792.0363391933 982519.4621422575 1028903.2416295777 0.6362990376264809 0.6037871898027278 0.603127484191941 0.6512214312468751 0.7227407338969903 0.8304315067762161 0.8667750418764016 0.9794818361569662 0.9549192017182708 1.0 19.97267588645922 -6.436374774269919 0.8609059280813837 0.9911674853186041 0.6029019000512833 0.9832801861609398 0.019672758813317873 0.06739270684221718 0.10503162125146903 0.013512129826616294 0.010613271684309786 3.6612149387259885e-07 6.436374774269919 -0.3882655852673208 VTS(ph)PEKAEEAK ddPTM_KYSE-520_SHP099_60min_R1 2 VTSPEKAEEAK 11 1 P56211;H3BMD8;P56211-2;H3BTD3 P56211 ARPP19 cAMP-regulated phosphoprotein 19 1 VT(0.285)S(0.715)PEKAEEAK;VT(0.211)S(0.789)PEKAEEAK 141.65 0.00014045 1197650000.0 3204560.0 2861170.0 2633930.0 2564630.0 2726480.0 3048580.0 2870120.0 3322340.0 3194380.0 3295130.0 True False 3026796.6686680177 2723715.0984962713 2803717.342237007 2808371.664115876 2941038.46445086 3029552.6814066684 3160259.7392718582 3310815.5779799824 2614361.1157667525 3265937.711772346 0.926777218609429 0.8339764376639555 0.8584723866994686 0.8598974971239853 0.9005188475731305 0.9276210842865716 0.9676423796695318 1.0137411886472514 0.8004932569115047 1.0 21.639065845289895 -6.132931089334965 2.2538460132697784 0.9459778859364376 0.8666858067454286 0.25357140419950774 0.05846381280221291 0.41718686142221295 4.16461203250007 0.02113753397965561 0.021207983109298972 7.363239227088498e-07 6.132931089334965 -0.079292079191009 VTS(ph)PTKV ddPTM_KYSE-520_SHP099_60min_R1 10 VTSPTKV 7 1 E7EX44;Q05682-3;Q05682-6;Q05682-2;Q05682-5;Q05682-4;Q05682 E7EX44;Q05682-5;Q05682 CALD1 Caldesmon 1 VTS(0.999)PT(0.001)KV;VT(0.003)S(0.987)PT(0.01)KV;VT(0.012)S(0.988)PT(0.001)KV;VT(0.012)S(0.987)PT(0.001)KV;VTS(0.999)PT(0.001)KV;VT(0.002)S(0.991)PT(0.007)KV;VT(0.001)S(0.998)PT(0.001)KV;VTS(0.995)PT(0.004)KV;VT(0.008)S(0.991)PT(0.001)KV;VT(0.017)S(0.982)PT(0.001)KV 133.12 0.0020182999999999998 88094420000.0 122343700.0 120367900.0 95576700.0 87827000.0 90329300.0 124228700.0 105235800.0 128338100.0 129744700.0 132983700.0 True False 115557051.07488064 114585245.40809871 101737727.01012702 96174051.6738497 97437702.00658745 123453342.6030036 115874061.66643393 127892925.08543774 106186333.07772464 131805567.87775314 0.8767235932100937 0.8693505688194757 0.7718773087377204 0.7296660772559251 0.7392533075458454 0.9366322272326458 0.8791287312983975 0.9703150416532913 0.805628584493564 1.0 26.97383607466456 -6.271927005619363 24.858200962991162 0.9140348504435579 0.7961948060798726 0.45254041193769645 0.06643407802552152 674.8546745042918 1599563.3458502449 0.024059975697132793 0.021446322278627545 5.346542142657519e-07 6.271927005619363 -0.11784004436368534 VTS(ph)RGPDEEAVVDLGK ddPTM_KYSE-520_SHP099_60min_R1 1 VTSRGPDEEAVVDLGK 16 1 Q9Y6M7-7;Q9Y6M7-13;Q9Y6M7-14;Q9Y6M7-8;E9PFN4 Q9Y6M7-7 SLC4A7 Sodium bicarbonate cotransporter 3;Anion exchange protein 1 VT(0.205)S(0.795)RGPDEEAVVDLGK 146.6 9.4194e-06 483200000.0 606100.0 697380.0 527970.0 644620.0 710290.0 703560.0 681880.0 1010600.0 1144300.0 653810.0 True False 572478.4247696041 663876.818011279 562003.7909818687 705884.49098793 766185.7820027289 699168.8210676695 750811.0849074926 1007094.4644758144 936523.9654555476 648017.7520564836 0.8834301575116491 1.024473196767321 0.8672660420155934 1.089298076708248 1.1823530753150497 1.0789346724667002 1.1586273408788486 1.5541155489642084 1.4452134412730049 1.0 19.30567380985081 -6.194911322974131 0.8443460598594587 1.3422616865369277 0.934304659936485 0.4452387692804305 0.15710175200820814 0.5310348445449674 0.8255359204785554 0.10054163027758475 0.10138312892213892 6.383938242188506e-07 6.194911322974131 -0.40795702660044264 VTSFSTPPT(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 2 VTSFSTPPTPER 12 0 B0QY16;Q6ICG6-3;Q6ICG6;Q6ICG6-2 B0QY16 KIAA0930 Uncharacterized protein KIAA0930 1 VTSFSTPPT(1)PER;VTSFSTPPT(1)PER 162.13 1.6529e-05 541610000.0 2121670.0 2266860.0 2009430.0 1702910.0 1913230.0 2104380.0 1697490.0 1967780.0 2695660.0 2240210.0 True False 2003976.7356557122 2157956.642973773 2138961.073001678 1864754.0544014405 2063790.3162103922 2091245.7838398714 1869088.8551059149 1960954.2304633046 2206196.0960586425 2220363.482257005 0.9025444489920474 0.9718934130461401 0.963338250738757 0.8398417958603398 0.9294830926117306 0.9418483957924381 0.8417940891398473 0.8831681146503049 0.993619339215595 1.0 21.082364440099827 -7.774766626968274 23.89052677552025 0.996809873630047 0.9103311322421331 0.3992926029594309 0.04294729086822582 165.63080055724927 296895.2593757968 0.04248310766542037 0.011260708676458689 1.6797063847984124e-08 7.774766626968274 -0.0864787413879139 VTSGGVSES(ph)PSGFSK ddPTM_KYSE-520_SHP099_60min_R1 2 VTSGGVSESPSGFSK 15 0 E7EPP6;O14757-2;O14757-3;O14757 E7EPP6 CHEK1 Serine/threonine-protein kinase Chk1 1 VTSGGVS(0.003)ES(0.995)PS(0.002)GFSK;VTSGGVS(0.013)ES(0.958)PS(0.03)GFSK 186.16 4.6633e-09 834080000.0 2204210.0 2238400.0 2035300.0 1893380.0 1793710.0 2041860.0 1802750.0 2112810.0 2459500.0 1943480.0 True False 2081938.0773163016 2130863.9040931035 2166498.694595142 2073326.265934548 1934864.772186171 2029115.9943504885 1984989.5631445153 2105481.155243561 2012916.7989495038 1926262.2792045583 1.0808175500254456 1.1062169088277192 1.1247163576757513 1.0763468133689038 1.0044658991013233 1.0533954883799121 1.0304876882935214 1.0930397059496022 1.0449858363943716 1.0 20.877372722737075 -1.0000000085771947 0.11839988368137308 0.9910177897881416 1.3591686233119542 0.4196309296078993 0.030396060268738236 106.08932823180977 0.8674855320351256 0.24171299627378176 6.431479479391934 0.09999999802502794 1.0000000085771947 0.3681508335238126 VTSLANLIS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 2 VTSLANLISPVR 12 0 Q7Z628-2;Q7Z628 Q7Z628-2 NET1 Neuroepithelial cell-transforming gene 1 protein 1 VTSLANLIS(1)PVR;VTSLANLIS(1)PVR 191.98 7.5731e-08 1311700000.0 542310.0 665650.0 483860.0 386200.0 398510.0 475320.0 379430.0 529830.0 554270.0 588920.0 True False 512226.9832318174 633671.1748389798 515050.3898033732 422904.3318847358 429870.46978826576 472353.3515689985 417786.48727994657 527992.143393251 453628.5400096535 583702.6269728262 0.877547846389363 1.0856061726590103 0.8823849097176514 0.7245201791843636 0.7364545745110687 0.8092362955751928 0.7157522820252722 0.9045567365894881 0.777156927256337 1.0 19.154874035567946 -4.996447933554536 22.058845341227354 0.7990744380290948 0.9821819069263346 0.33911266617352775 0.09494644243064083 22.93641966933478 142412.0754674501 0.023359386670170786 0.048094398639032615 1.0082124741125833e-05 4.996447933554536 0.18310746889723972 VTSSITIYPSDSS(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 VTSSITIYPSDSSSPR 16 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 VTSSITIYPS(0.001)DS(0.178)S(0.523)S(0.299)PR 79.471 0.010971 497370000.0 391950.0 411560.0 352090.0 336630.0 329980.0 371000.0 311340.0 395160.0 463270.0 381070.0 True False 370207.75216704566 391788.03983584524 374786.284763918 368623.2139885004 355947.5486706279 368684.4513845378 342813.285585585 393789.2821910372 379151.84608633386 377694.01626797335 0.9801790238169509 1.0373159832054957 0.9923013567098922 0.9759837278622989 0.9424230550109738 0.9761458628006346 0.9076481776781962 1.0426145642499252 1.0038598170888844 1.0 18.52685840206212 -11.410222771854452 3.221405195660701 1.3392330190880914 0.9838190421269668 0.015051632193337272 0.038002060933779974 0.29284796176120553 0.0372921011740206 0.11638133267527495 0.009307549624088222 3.888456350130993e-12 11.410222771854452 -0.35541397696112464 VTSSITIYPSDSSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 VTSSITIYPSDSSSPR 16 0 Q86V48-2;Q86V48-3;Q86V48 Q86V48-2 LUZP1 Leucine zipper protein 1 1 VTSSITIYPSDS(0.001)S(0.002)S(0.997)PR;VTSSITIYPSDSS(0.001)S(0.999)PR;VTSSITIYPSDS(0.026)S(0.118)S(0.856)PR 392.88 2.8972999999999996e-86 2977910000.0 1744870.0 1951850.0 1511580.0 1442340.0 1420790.0 1640660.0 1460880.0 1523980.0 1911590.0 1740320.0 True False 1648078.58278789 1858080.196213422 1609018.8654135112 1579419.5599446662 1532598.0898107218 1630420.0323680737 1608560.0072148435 1518693.6690796046 1564493.4432624057 1724902.11874847 0.9554620896307319 1.0772090636433223 0.932817490293861 0.9156574989255849 0.8885130774392709 0.9452246679081424 0.9325514704463113 0.880452086279259 0.9070041866477321 1.0 20.718083066401803 -4.893320300902003 7.6454838726875805 0.9193864649889479 1.015741040309426 0.43037741147043507 0.041719877633825134 0.17659408874596932 11.377888761780367 0.010221366225254127 0.021475973359828947 1.2784380826180537e-05 4.893320300902003 0.09635457532047809 VTSSMS(ph)SPSMQPK ddPTM_KYSE-520_SHP099_60min_R1 4 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VTSSMS(0.737)S(0.258)PS(0.006)MQPK;VTSSMS(0.687)S(0.193)PS(0.12)MQPK;VT(0.004)S(0.004)S(0.045)MS(0.496)S(0.372)PS(0.079)MQPK;VTS(0.001)SMS(0.556)S(0.369)PS(0.074)MQPK 146.79 7.800899999999999e-05 7040730000.0 5379080.0 6281990.0 4195016.0 3803500.0 3578040.0 5504440.0 4142100.0 5100270.0 6044610.0 5105930.0 True False 5080691.709469861 5980193.770940775 4465433.443622924 4164983.4964360297 3859611.3917372404 5470084.748191654 4560823.891000365 5082578.353781969 4947061.196217995 5060695.432553425 1.0039512903281647 1.181694067671527 0.8823754567205488 0.8230061563563695 0.7626642312655109 1.0808958612693407 0.9012247331982108 1.0043240936982256 0.9775457270942514 1.0 22.27090422067799 -4.771453439554766 24.9934686680642 0.923865127037673 1.09282269254583 0.31250032312612797 0.09695305900456827 211.64252291978835 528228.8906000424 0.026258490693186625 0.05569143223520553 1.6925696940692493e-05 4.771453439554766 0.168957565508157 VTSSMSS(ph)PSMQPK ddPTM_KYSE-520_SHP099_60min_R1 10 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VTSSMS(0.15)S(0.766)PS(0.084)MQPK;VTSSMS(0.113)S(0.811)PS(0.076)MQPK;VTSSMS(0.33)S(0.667)PS(0.003)MQPK;VTSSMS(0.003)S(0.992)PS(0.005)MQPK;VTSSMS(0.242)S(0.756)PS(0.001)MQPK;VTSSMS(0.023)S(0.963)PS(0.014)MQPK;VTSSMS(0.089)S(0.903)PS(0.009)MQPK;VTSSMS(0.001)S(0.969)PS(0.031)MQPK;VTSSMS(0.053)S(0.945)PS(0.002)MQPK;VTSSMS(0.044)S(0.633)PS(0.323)MQPK 278.62 6.132e-23 25181000000.0 26452310.0 32351070.0 21035110.0 20725290.0 20108360.0 30720730.0 20448570.0 26478660.0 30842670.0 26578880.0 True False 24984947.63292737 30796876.037253905 22391066.847965986 22695015.330314364 21690773.531082213 30528990.528793793 22515711.01441134 26386811.708625685 25242418.608439125 26343411.801255725 0.9484324893610173 1.1690541934961474 0.8499683722401765 0.861506303797466 0.8233851292583244 1.1588852180239824 0.854699884140978 1.0016474672186497 0.9582061275463143 1.0 24.65093886895539 -8.884185319713115 15.389609324393822 0.9999940733841031 0.9587206506889646 0.011250984864417668 0.11690534051093877 0.0 0.0 0.11279648665623963 0.027357166393073475 1.3056136450937187e-09 8.884185319713115 -0.04127342269513845 VTSSMSSPS(ph)MQPK ddPTM_KYSE-520_SHP099_60min_R1 1 VTSSMSSPSMQPK 13 0 A0A2R8Y7R9;Q13136-2;Q13136 A0A2R8Y7R9 PPFIA1 Liprin-alpha-1 1 VTS(0.001)SMS(0.003)S(0.321)PS(0.675)MQPK 118.4 0.00089484 782450000.0 2626900.0 3074100.0 2237000.0 2113200.0 2156800.0 3075800.0 2101200.0 2601500.0 3241400.0 2820500.0 True False 2481180.620404675 2926415.6216818285 2381200.5993265524 2314037.892643253 2326527.8894866686 3056602.7912899205 2313609.8017358216 2592476.0036946614 2652843.4690444907 2795512.564315796 0.887558386278241 1.0468261380889452 0.8517939177674035 0.8277687327116756 0.8322366063327239 1.0933961915631836 0.827615597679161 0.9273705426286188 0.948964960096245 1.0 21.414681398439214 VTSSVPLPSGSTS(ph)SPGR ddPTM_KYSE-520_SHP099_60min_R1 1 VTSSVPLPSGSTSSPGR 17 0 Q15036-2;Q15036 Q15036-2 SNX17 Sorting nexin-17 1 VTSSVPLPS(0.063)GS(0.048)T(0.048)S(0.625)S(0.215)PGR 138.87 1.2754e-05 835610000.0 503600.0 665380.0 477540.0 344070.0 408410.0 607800.0 400360.0 497780.0 532370.0 604040.0 True False 475664.30409828917 633414.1460442586 508322.9924910157 376770.3093515828 440549.54346497153 604006.4947480374 440832.29593706224 496053.3173627254 435705.0279555799 598688.6755360096 0.7945102747641318 1.058002551120846 0.8490606441418171 0.629325933072407 0.7358574856465171 1.0088824449656857 0.7363297719676799 0.8285663945766234 0.7277656080023404 1.0 19.191446455713844 -4.990664645006285 24.596447885248644 0.7995463640511721 0.9330752550060596 0.11276652322192315 0.12721343599734253 300.98070669119966 792995.7847868978 0.03241366077397588 0.06732709579686323 1.0217281406937231e-05 4.990664645006285 0.1335288909548875 VTSSVPLPSGSTSS(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 5 VTSSVPLPSGSTSSPGR 17 0 Q15036-2;Q15036 Q15036-2 SNX17 Sorting nexin-17 1 VTSSVPLPSGSTS(0.115)S(0.885)PGR;VTSSVPLPSGST(0.001)S(0.04)S(0.959)PGR;VTSSVPLPSGSTS(0.001)S(0.999)PGR;VTSSVPLPS(0.053)GS(0.023)T(0.21)S(0.091)S(0.623)PGR;VTSSVPLPSGST(0.001)S(0.1)S(0.899)PGR 351.81 1.6917e-59 8948530000.0 6974860.0 8086770.0 5358790.0 4553680.0 4698170.0 7042570.0 5050730.0 6416010.0 7183320.0 7211620.0 True False 6587950.61176131 7698269.4307107655 5704226.17776715 4986460.378086187 5067889.250069356 6998614.708321299 5561307.0787745975 6393754.358817994 5879010.164761114 7147730.657355456 0.9216842278439665 1.0770228761752196 0.7980471636682546 0.6976284665895758 0.7090207358127275 0.9791380011107852 0.778052132259862 0.8945152895819355 0.8225002377098877 1.0 22.7690538407183 -4.771873715147084 24.999062792402277 0.82482357984575 0.9993535596119024 0.29018821133316175 0.10194144099737716 212.05781393740523 508061.1864228534 0.02657937566639266 0.05628714490796546 1.6909325522691925e-05 4.771873715147084 0.17452997976615237 VTTEIQLPSQS(ph)PVEEQS(ph)PASLSSLR ddPTM_KYSE-520_SHP099_60min_R1 3 VTTEIQLPSQSPVEEQSPASLSSLR 25 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 2 VTTEIQLPS(0.001)QS(0.999)PVEEQS(0.994)PAS(0.005)LS(0.001)SLR;VTTEIQLPS(0.01)QS(0.99)PVEEQS(0.991)PAS(0.009)LSSLR;VTTEIQLPS(0.037)QS(0.963)PVEEQS(0.999)PAS(0.001)LSSLR 137.04 1.2626e-06 280306000.0 361176.0 359895.0 330240.0 304842.0 299777.0 354346.0 320174.0 332871.0 400813.0 387897.0 True False 341140.847293494 342605.1039865919 351527.7988026821 333814.092025911 323367.7444021905 352134.39517602546 352540.31251711637 331716.34819367575 328035.4628734898 384460.53435929934 0.887323448847624 0.8911320496329768 0.914340400084239 0.8682662125052959 0.8410947691707302 0.9159181858883249 0.9169739960555957 0.8628098817645317 0.8532357252745292 1.0 18.552475984700983 VTTEIQLPSQS(ph)PVEEQSPASLSSLR ddPTM_KYSE-520_SHP099_60min_R1 6 VTTEIQLPSQSPVEEQSPASLSSLR 25 0 E9PMS6;A0A0A0MTE2;E9PMT2;Q8WWI1-5;H0Y424;Q8WWI1-3;F8WD26;J3KP06;Q8WWI1-4;Q8WWI1-2;Q8WWI1;E9PMP7 E9PMS6;Q8WWI1-3 LMO7 LIM domain only protein 7 1 VTTEIQLPS(0.025)QS(0.975)PVEEQSPASLSSLR;VT(0.011)T(0.011)EIQLPS(0.121)QS(0.853)PVEEQS(0.002)PASLSSLR;VTTEIQLPS(0.001)QS(0.999)PVEEQSPASLSSLR;VTTEIQLPS(0.005)QS(0.995)PVEEQSPASLSSLR;VTTEIQLPS(0.006)QS(0.994)PVEEQSPASLSSLR;VTTEIQLPS(0.002)QS(0.998)PVEEQSPASLSSLR 251.18 2.7745e-29 3814646000.0 2851340.0 3603600.0 2719590.0 2373790.0 2354370.0 3429690.0 2544920.0 3253000.0 3893370.0 3498150.0 True False 2693170.4861946288 3430477.6468861275 2894899.1228978494 2599394.2878940147 2539645.5244671367 3408284.0325310924 2802185.3496257057 3241716.102255911 3186432.1518707247 3467159.1125195166 0.7767657608991456 0.9894203108530738 0.8349484488452515 0.749718776536069 0.7324860042611734 0.9830192159985295 0.8082078897121663 0.9349775989658056 0.9190325706036626 1.0 21.725322614568576 -7.670429332112571 0.8454912988973338 0.9956634234545777 0.8355964320362258 0.28947147289632424 0.08327363733501535 0.7947710601052174 1.184972812636468 0.08096074732306698 0.031035731137822428 2.1358496007086676e-08 7.670429332112571 -0.1600669914183519 VTVAGLAGKDPVQCSR ddPTM_KYSE-520_SHP099_60min_R1 1 VTVAGLAGKDPVQCSR 16 1 Q99497;K7ELW0 Q99497 PARK7 Protein deglycase DJ-1 0 92.633 0.0020066 453010000.0 122400.0 150940.0 123900.0 111840.0 143420.0 138790.0 132650.0 176280.0 121430.0 114870.0 False True 115610.22800164914 143688.61583444104 131886.7922470092 122469.23997407794 154706.33805182573 137923.76012846365 146059.5565392429 175668.52582406127 99381.37300119468 113852.34116750765 1.0154400587297117 1.2620611430645605 1.1584021100889614 1.0756848626757045 1.3588331734365549 1.2114266488867402 1.2828858417970495 1.542950492037799 0.872897052287908 1.0 16.796804432630942 -4.252746124554266 23.08804805650329 1.216425222431305 1.0154397486302533 0.07396401407054065 0.17929010981281707 910.7453560469285 2418645.380939764 0.04229779353944093 0.4581692462913475 5.587967549956062e-05 4.252746124554266 -0.2009854738010517 VTVHST(ph)PVRR ddPTM_KYSE-520_SHP099_60min_R1 4 VTVHSTPVRR 10 1 Q9NYZ3 Q9NYZ3 GTSE1 G2 and S phase-expressed protein 1 1 VTVHS(0.046)T(0.954)PVRR;VTVHS(0.032)T(0.968)PVRR;VTVHS(0.027)T(0.973)PVRR;VTVHS(0.023)T(0.977)PVRR 109.16 0.0013292 2765560000.0 1421820.0 1316230.0 1412580.0 1291710.0 1197060.0 1090840.0 1120850.0 1116720.0 1413430.0 1204120.0 True False 1342948.8102720997 1252996.335098491 1503637.1670079138 1414473.7300332277 1291261.8116602877 1084031.6629334483 1234156.4564418406 1112846.3589644062 1156786.741670747 1193452.4335911847 1.1252637913947434 1.0498921446983307 1.2599054010752324 1.185194893588657 1.081954986488056 0.9083157672832579 1.0341061124054811 0.9324597509225995 0.969277626080071 1.0 20.186709636632315 -6.0427337100937155 4.489863169378608 0.9694718642476451 1.1537776090862606 0.6937791290401318 0.05855492805438728 0.1254239224042695 5.642478998128116 0.02008304595141622 0.02086490455376653 9.062881258179167e-07 6.0427337100937155 0.1843057448386155 VTVTSS(ph)PIR ddPTM_KYSE-520_SHP099_60min_R1 4 VTVTSSPIR 9 0 Q5T534;Q5T532;Q9H2G9-2;Q9H2G9 Q5T534 BLZF1 Golgin-45 1 VTVTS(0.003)S(0.997)PIR;VTVT(0.002)S(0.025)S(0.973)PIR;VTVT(0.006)S(0.033)S(0.962)PIR;VTVT(0.006)S(0.017)S(0.977)PIR 170.02 8.5645e-05 2562080000.0 6534000.0 6437500.0 5171900.0 4546700.0 5179100.0 6240300.0 5388500.0 6228000.0 6906400.0 6565200.0 True False 6171545.994793931 6128232.8371154955 5505288.949332582 4978817.000984803 5586665.704951962 6201351.972978246 5933222.166692116 6206396.521626122 5652371.856176001 6507037.435648304 0.9484417533828207 0.9417853973826004 0.8460515255640423 0.7651434389648255 0.8585574864447288 0.9530223291792692 0.9118162028986363 0.9537975742424434 0.8686551924858947 1.0 22.633569423050723 -6.255851726207712 24.586603184053672 0.9329679798421415 0.8684955071929548 0.24249510234994842 0.05741065333256405 622.1683488659311 2737649.4600444315 0.020833382377998214 0.020255071210658653 5.548151017277083e-07 6.255851726207712 -0.06447247264918676 VTVVFSTVFKDDDDVVIGK ddPTM_KYSE-520_SHP099_60min_R1 1 VTVVFSTVFKDDDDVVIGK 19 1 O15144 O15144 ARPC2 Actin-related protein 2/3 complex subunit 2 0 187.31 1.0702e-12 38856000.0 64636.0 57455.0 49257.0 58451.0 51687.0 35093.0 37843.0 49172.0 40345.0 23686.0 False True 61050.512231328445 54694.775558286776 52432.185033986534 64006.16546606605 55754.47284119872 34873.97156991262 41668.5397520887 49001.433808831076 33019.36501468503 23476.16046742914 2.6005322427417386 2.329800719933329 2.2334225013809657 2.72643244004352 2.3749400128079956 1.485505758844033 1.774929925611119 2.0872848384562603 1.4065061899920195 1.0 14.518908854115406 -6.2204540384803115 6.707882490741291 1.632877653668282 2.4526898849523104 0.6982993116943872 0.2941229093049015 0.13858555584657 17.881205392263706 0.09603299978968993 0.09505106653680427 6.019299619633929e-07 6.2204540384803115 0.8198122312840284 VTYAEKLS(ph)PLTGQACR ddPTM_KYSE-520_SHP099_60min_R1 4 VTYAEKLSPLTGQACR 16 1 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 VTYAEKLS(0.993)PLT(0.007)GQACR;VTYAEKLS(1)PLTGQACR;VTYAEKLS(0.885)PLT(0.115)GQACR;VTYAEKLS(1)PLTGQACR 254.59 1.6617e-22 638730000.0 1366540.0 1405470.0 1143900.0 1159680.0 1186770.0 1406480.0 1262290.0 1431470.0 1693040.0 1457480.0 True False 1290735.3020700489 1337949.1115465201 1217637.624304711 1269895.6385294932 1280162.0472023806 1397701.636612734 1389894.5919632192 1426504.564677609 1385626.6140652455 1444567.8611022835 0.8935096348365026 0.9261933257504376 0.8429078737606605 0.8790834080722896 0.8861903145384583 0.967556924287525 0.9621525089881582 0.987495709332138 0.9591980074981991 1.0 20.46220654794191 -6.277515218892029 4.583995118107601 0.9745922901779857 0.884618809206126 0.80794632250632 0.021887239067259628 0.08991684958956968 5.065108598904496 0.007927313293270311 0.007287278054024003 5.278187102152048e-07 6.277515218892029 -0.08997348097185964 VTYS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 VTYSPR 6 0 Q96K76-2;Q96K76-4;Q96K76;Q96K76-3 Q96K76-2 USP47 Ubiquitin carboxyl-terminal hydrolase 47 1 VT(0.001)YS(0.999)PR;VTYS(1)PR 125.58 0.007703499999999999 3856500000.0 2251780.0 2055680.0 2070780.0 1997280.0 1957900.0 1988010.0 1909350.0 1897820.0 2332600.0 1966240.0 True False 2126869.274587857 1956922.047161414 2204265.792165148 2187100.890695873 2111975.5910728616 1975602.092175135 2102365.7314602607 1891236.9053745172 1909058.6400608334 1948820.6433115725 1.0913622461293986 1.0041570802719306 1.131076787250932 1.1222689467099436 1.0837198375957495 1.0137423877130394 1.0787887221308234 0.9704520074052556 0.9795968893355046 1.0 20.894169889826735 -7.000725728879344 1.2324142963316391 0.9792779480023169 1.0831004990782087 0.505137174486652 0.04017264248300877 0.4134050140052461 1.1857183271740162 0.0313998840201685 0.01457641432510528 9.983303429317079e-08 7.000725728879344 0.10382255107589178 VVDLMAHMASK ddPTM_KYSE-520_SHP099_60min_R1 4 VVDLMAHMASK 11 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;; 143.17 0.0001422 3523280000.0 5669450.0 5257720.0 3821960.0 4096320.0 5387160.0 5435940.0 3957540.0 4694450.0 4282250.0 3800220.0 False True 5354954.306731626 5005131.239201385 4068329.656952218 4485633.02119648 5811098.8432525 5402012.282100446 4357606.76506834 4678166.048642866 3504701.3467377573 3766553.007326417 1.4217121852037047 1.3288360019003522 1.0801201122189992 1.1909119591497483 1.542816158952014 1.434205829997044 1.1569216619525198 1.2420284646315205 0.9304797622443317 1.0 21.844813402084675 -7.573201697266656 1.8051615411500281 0.9612477693240973 1.3144356283942717 0.4929843879892085 0.13474258056493185 0.33673528446366596 1.9781779893542666 0.13053197161935004 0.041360224843651226 2.6717652855692228e-08 7.573201697266656 0.35318785907017447 VVDLMAHMASKE ddPTM_KYSE-520_SHP099_60min_R1 2 VVDLMAHMASKE 12 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 172.76 4.3807e-06 2610400000.0 5488400.0 5180900.0 3658300.0 3352500.0 4492500.0 4192600.0 2659980.0 3085800.0 4441900.0 3123800.0 False True 5183947.511145842 4932001.7873105565 3894119.871486956 3671120.592034125 4846034.191171573 4166432.428233995 2928876.7373030884 3075096.0800311365 3635362.9311867477 3096125.5622796263 1.6743337461188064 1.5929592285912348 1.2577396469088222 1.1857143769489564 1.5651930432703502 1.3456923320533292 0.9459812525001747 0.9932078070396454 1.1741652132835627 1.0 21.562032549981204 -1.0000000000000002 0.20358794552620663 0.9441465822285163 4.5569287827556835 0.6305434304818434 0.15274246515625972 36.854589107189234 0.4498291825238737 0.3012964863904204 42.722203046674494 0.09999999999999995 1.0000000000000002 3.612782200527167 VVDNS(ph)PPPALPPK ddPTM_KYSE-520_SHP099_60min_R1 3 VVDNSPPPALPPK 13 0 Q13905-2;Q13905;Q13905-4;Q13905-3 Q13905-2 RAPGEF1 Rap guanine nucleotide exchange factor 1 1 VVDNS(1)PPPALPPK;VVDNS(1)PPPALPPK;VVDNS(1)PPPALPPK 147.35 7.8889e-06 964760000.0 1835140.0 1860990.0 1422210.0 1480020.0 1323200.0 1816100.0 1426640.0 1604980.0 2033460.0 1853370.0 True False 1733341.1259391066 1771585.2469970628 1513887.9322164552 1620680.655815762 1427328.3120218646 1804765.0462519121 1570858.6938646482 1599412.6989851487 1664234.9233550995 1836950.5837000408 0.9435970359353701 0.964416388071084 0.8241310058363883 0.8822668776159119 0.7770096401542262 0.9824788223843781 0.8551447751526216 0.8706890175366415 0.9059769697249818 1.0 20.80888138596951 -8.112419324789345 6.021249778623239 0.999999066949121 0.8862326403088804 0.24015031923686225 0.059730866420449044 2.353350500731508 125.3044858878735 0.057494456833905146 0.014920225969538507 7.719348980805861e-09 8.112419324789345 -0.11376642664024061 VVDPFSKK ddPTM_KYSE-520_SHP099_60min_R1 1 VVDPFSKK 8 1 P61247;H0Y8L7;E9PFI5;H0Y9Y4;D6RI02 P61247 RPS3A 40S ribosomal protein S3a 0 68.735 0.059955999999999995 480540000.0 1210300.0 1094100.0 807420.0 669580.0 1089900.0 1004500.0 618860.0 861410.0 978420.0 932580.0 False True 1143162.2463267657 1041537.7937224197 859467.5851176763 733216.6818834328 1175668.929317285 998230.5428996437 681420.4082915621 858421.9697646062 800763.5919610395 924318.0667362617 1.2367628497874503 1.12681752224108 0.9298396472465691 0.7932514880644906 1.2719311367228117 1.0799643313522633 0.737214204519053 0.9287084182998472 0.8663290492508826 1.0 19.81802985675202 -6.733463195449574 24.926596003426575 0.8771219141157023 1.065342840345887 0.29502268872398185 0.14349291800986794 284.6131408346195 253588.12293472077 0.057540793647402555 0.04456143159767433 1.847297338614584e-07 6.733463195449574 0.18822092623018483 VVDVEEQQLEES(ph)GPHDLTETSYLPR ddPTM_KYSE-520_SHP099_60min_R1 2 VVDVEEQQLEESGPHDLTETSYLPR 25 0 P38398;P38398-4;P38398-8;P38398-7;E7EUM2;P38398-5;H0Y8B8;B7ZA85;P38398-3;P38398-6;A0A2R8Y7V5;K7EPC7 P38398 BRCA1 Breast cancer type 1 susceptibility protein 1 VVDVEEQQLEES(1)GPHDLTETSYLPR;VVDVEEQQLEES(1)GPHDLTETSYLPR 158.41 1.2129e-08 658660000.0 99211.0 114731.0 89335.0 72483.0 99178.0 71673.0 81068.0 83748.0 119887.0 81001.0 True False 93707.5680577747 109219.15054525815 95093.67704105395 79371.76252719141 106982.7443543717 71225.6622212505 89263.1445874357 83457.4977349302 98118.54290533012 80283.39415782431 1.1672098450840358 1.3604201926310038 1.1844750466592753 0.9886448294794217 1.3325637945010238 0.8871780144376089 1.1118506575837916 1.0395362404691824 1.222152400687554 1.0 16.292813990658917 -5.003017713025335 24.160722655988224 1.088077930052455 1.2659732248820785 0.25540251259678937 0.1254394730719304 101.9149773410725 816007.1379621744 0.031065471586005415 0.06266254270245006 9.930755442659632e-06 5.003017713025335 0.17789529482962352 VVDYSQFQES(ph)DDADEDYGR ddPTM_KYSE-520_SHP099_60min_R1 58 VVDYSQFQESDDADEDYGR 19 0 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDYSQFQES(1)DDADEDYGR;VVDYS(0.278)QFQES(0.721)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDY(0.001)S(0.015)QFQES(0.984)DDADEDYGR;VVDY(0.006)S(0.02)QFQES(0.974)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYS(0.001)QFQES(0.999)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYS(0.005)QFQES(0.994)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDY(0.014)S(0.12)QFQES(0.865)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYS(0.007)QFQES(0.993)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR;VVDYS(0.006)QFQES(0.994)DDADEDYGR;VVDYSQFQES(1)DDADEDYGR 366.83 5.500499999999999e-78 58324736100.0 10998864.3 10348579.8 9709460.799999999 9818227.4 9911699.5 10142470.1 9742865.799999999 10294641.700000001 12123010.9 10198352.2 True False 10388735.371586617 9851418.492873034 10335348.17885455 10751348.780138299 10691693.860794267 10079167.181947645 10727769.756271066 10258931.990730138 9921777.716795275 10108002.73370594 1.0277733045069875 0.9746157329402667 1.0224916287755352 1.0636471975108466 1.057745446104992 0.9971472552473556 1.0613144890135877 1.0149316596958282 0.9815764773895754 1.0 23.268994623783303 -4.977814721738267 24.706314357730985 1.0287063580468832 1.0005342833036195 0.08501335425341472 0.029617826657894503 416.58405591186903 463915.86542092473 0.007783011162805735 0.016199729527892948 1.0524107564516111e-05 4.977814721738267 -0.028172074743263664 VVDYSQFQES(ph)DDADEDYGRDSGPPTK ddPTM_KYSE-520_SHP099_60min_R1 11 VVDYSQFQESDDADEDYGRDSGPPTK 26 1 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDY(0.001)S(0.004)QFQES(0.994)DDADEDYGRDSGPPTK;VVDY(0.001)S(0.001)QFQES(0.998)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYSQFQES(1)DDADEDYGRDSGPPTK;VVDYS(0.001)QFQES(0.999)DDADEDYGRDSGPPTK 335.34 3.0661999999999994e-73 23214200000.0 11819590.0 12966910.0 12429310.0 8132870.0 9834660.0 9760710.0 7097600.0 7509820.0 15195120.0 8725050.0 True False 11163933.780931495 12343960.179871285 13230523.210199153 8905815.519563464 10608591.790439062 9699789.78833846 7815094.673900725 7483770.187225166 12436069.245803466 8647752.844986172 1.2909635579379635 1.4274182439231151 1.5299377129944223 1.0298415876590312 1.2267454887531566 1.121654372206329 0.903713925916811 0.8654005637504008 1.4380694578954922 1.0 23.043893860388394 -5.26812696318156 24.991234357643965 1.0780745969461842 1.4172376827495707 0.4653929167919254 0.16321844540218083 448.840450897092 1677299.1068944281 0.04615829570605094 0.07025536894318865 5.393529231280113e-06 5.26812696318156 0.3391630858033865 VVDYSQFQES(ph)DDADEDYGRDSGPPTKK ddPTM_KYSE-520_SHP099_60min_R1 6 VVDYSQFQESDDADEDYGRDSGPPTKK 27 2 Q9H1E3 Q9H1E3 NUCKS1 Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 1 VVDYSQFQES(1)DDADEDYGRDSGPPTKK;VVDY(0.001)S(0.008)QFQES(0.99)DDADEDYGRDSGPPTKK;VVDYSQFQES(0.999)DDADEDYGRDSGPPTKK;VVDYS(0.003)QFQES(0.996)DDADEDYGRDSGPPTKK;VVDYS(0.007)QFQES(0.993)DDADEDYGRDSGPPTKK;VVDYSQFQES(1)DDADEDYGRDSGPPTKK 174.6 1.3128e-10 16026200000.0 2232907.0 2650563.0 2721282.0 1451415.0 1713724.0 1547133.0 1224716.0 1196787.0 3215407.0 1449228.0 True False 2109043.1975202486 2523225.974903825 2896700.1919251448 1589357.045216169 1848584.329044253 1537476.7690671545 1348522.2453563171 1192635.6252291854 2631570.1426142864 1436388.967402322 1.468295319292522 1.7566453322647166 2.0166544422599983 1.1064948849408711 1.286966393502296 1.070376342313216 0.9388280444642304 0.830301298809083 1.8320734858980596 1.0 20.454015046448653 -5.275930891485618 24.543613503782154 1.1383996864904478 1.7481430539665646 0.4771645423681643 0.2851830861475527 502.3168929211497 850750.2801859863 0.07947893165143283 0.11851670110797408 5.2974773500700715e-06 5.275930891485618 0.6097433674761168 VVEAVNS(ph)DS(ph)DSEFGIPK ddPTM_KYSE-520_SHP099_60min_R1 10 VVEAVNSDSDSEFGIPK 17 0 Q02880;Q02880-2 Q02880 TOP2B DNA topoisomerase 2-beta 2 VVEAVNS(1)DS(0.995)DS(0.006)EFGIPK;VVEAVNS(0.999)DS(0.979)DS(0.022)EFGIPK;VVEAVNS(1)DS(0.988)DS(0.012)EFGIPK;VVEAVNS(1)DS(0.997)DS(0.003)EFGIPK;VVEAVNS(1)DS(0.996)DS(0.004)EFGIPK;VVEAVNS(1)DS(0.994)DS(0.007)EFGIPK;VVEAVNS(1)DS(0.999)DS(0.001)EFGIPK;VVEAVNS(1)DS(0.998)DS(0.002)EFGIPK;VVEAVNS(1)DS(0.995)DS(0.005)EFGIPK;VVEAVNS(1)DS(0.999)DS(0.001)EFGIPK 263.9 1.6518e-29 7637282000.0 4215030.0 4240400.0 3807870.0 3910320.0 4103230.0 3843060.0 3778350.0 4330610.0 4748240.0 4042950.0 True False 3981213.8834460075 4036684.819029833 4053331.3930074223 4281955.637119426 4426130.856814907 3819074.0370292724 4160302.491142468 4315588.124681976 3886079.309389716 4007132.6083675036 0.9935318524604417 1.007374902093487 1.0115291379535203 1.0685834624434565 1.1045631101831945 0.9530690422010152 1.038224310933739 1.076976618061097 0.9697905433114418 1.0 21.934138823108 -5.018059398301945 22.574245444842415 1.0340987316327233 1.0027029964494525 0.06488330512782114 0.04469896261871276 532.5636864104544 665713.7776440607 0.012127156495084923 0.02164325915188988 9.592694236053579e-06 5.018059398301945 -0.03139573518327077 VVEDPLCNFHS(ph)PNFLR ddPTM_KYSE-520_SHP099_60min_R1 2 VVEDPLCNFHSPNFLR 16 0 Q8IY63;F8WDH4 Q8IY63 AMOTL1 Angiomotin-like protein 1 1 VVEDPLCNFHS(1)PNFLR;VVEDPLCNFHS(1)PNFLR 183.86 3.3683e-12 657750000.0 921040.0 780360.0 771030.0 594680.0 801230.0 763540.0 798290.0 782760.0 992870.0 821130.0 True False 869948.0751522795 742870.3342557594 820731.827491619 651198.2084029376 864282.2426249074 758774.4636392179 878988.9437596098 780044.7882575575 812589.8362158969 813855.4270294728 1.0689221282550658 0.9127792352103554 1.008449167055683 0.8001399103275321 1.0619604095772754 0.9323209484621889 1.080030819439112 0.9584562102198886 0.9984449439402336 1.0 19.634413011886448 VVEHNIR ddPTM_KYSE-520_SHP099_60min_R1 1 VVEHNIR 7 0 O00232-2;O00232 O00232-2 PSMD12 26S proteasome non-ATPase regulatory subunit 12 0 80.229 0.01354 0.0 233540.0 173970.0 157660.0 141180.0 184200.0 176800.0 127600.0 165610.0 163640.0 153920.0 False True 220585.0706495518 165612.2200657061 167823.0158649193 154597.70475268504 198695.4920453654 175696.52561937002 140499.0532559922 165035.53756366446 133927.10102870388 152556.38854794807 1.4459248331001393 1.0855803656734744 1.1000720288562216 1.0133807323584838 1.3024396679586836 1.1516825174722136 0.9209647304402053 1.0818002388132977 0.8778858906102838 1.0 17.21898307082967 VVELRPPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 7 VVELRPPSR 9 1 A0A0J9YX88;E9PJ24;B7ZM65;F8WEF5;A0A0J9YYB5;A0A0J9YWD5;Q9P1Y6-2;Q9P1Y6-3;Q9P1Y6 A0A0J9YX88 PHRF1 PHD and RING finger domain-containing protein 1 1 VVELRPPS(1)R;VVELRPPS(1)R;VVELRPPS(1)R;VVELRPPS(1)R;VVELRPPS(1)R;VVELRPPS(1)R;VVELRPPS(1)R 100.04 0.0016448 12157930000.0 9840940.0 9323960.0 8597180.0 8296110.0 8929590.0 8848230.0 8322650.0 8979390.0 9731690.0 8542270.0 True False 9295043.440772466 8876022.966050714 9151367.97877435 9084569.800083566 9632297.930582928 8793004.914485734 9163984.683236564 8948242.591895375 7964660.41194102 8466592.133585503 1.0978494409693649 1.0483583980431832 1.0808797488274484 1.072990130709929 1.1376829990868784 1.0385530300444505 1.082369923889994 1.056888350201641 0.9407162039076611 1.0 23.013349960214608 -7.648604291353803 5.2119314355782285 0.9716722134051471 1.0783479483251106 0.690499976872226 0.02880845159420752 0.10888333946452566 4.403462631101202 0.02012558391700898 0.007111832554793326 2.245927374865347e-08 7.648604291353803 0.10667573491996352 VVES(ph)PDFSKDEDYLGK ddPTM_KYSE-520_SHP099_60min_R1 5 VVESPDFSKDEDYLGK 16 1 Q9Y6Y8 Q9Y6Y8 SEC23IP SEC23-interacting protein 1 VVES(0.989)PDFS(0.011)KDEDYLGK;VVES(0.989)PDFS(0.011)KDEDYLGK;VVES(0.954)PDFS(0.046)KDEDYLGK;VVES(0.624)PDFS(0.376)KDEDYLGK;VVES(0.998)PDFS(0.002)KDEDYLGK 233.31 4.0409e-23 7746890000.0 7151990.0 6201150.0 5954781.0 5788335.0 6029350.0 6343020.0 6141220.0 6030660.0 7450260.0 6209730.0 True False 6755254.8575613955 5903237.445884081 6338635.711246471 6338456.618073623 6503825.542691222 6303430.859356206 6762034.450131383 6009741.048026623 6097480.5897709085 6154716.623296835 1.0975736611481677 0.959140413311499 1.0298826248561086 1.0298535263315445 1.0567221759768661 1.0241626455223718 1.0986751891282416 0.9764448009317844 0.9907004599839289 1.0 22.553261002707206 -7.342384585458948 24.999999999979952 0.9876792598780298 1.0379948133687253 0.2875896097155113 0.03796191613887853 140.2258993588771 43306.78799023559 0.020154380158304022 0.009681851223963655 4.545853280285776e-08 7.342384585458948 0.0503155534906955 VVESPDFS(ph)KDEDYLGK ddPTM_KYSE-520_SHP099_60min_R1 1 VVESPDFSKDEDYLGK 16 1 Q9Y6Y8 Q9Y6Y8 SEC23IP SEC23-interacting protein 1 VVES(0.009)PDFS(0.991)KDEDYLGK 251.26 2.2827e-23 722610000.0 817110.0 683610.0 694130.0 717850.0 738450.0 768290.0 720640.0 687820.0 836610.0 774260.0 True False 771783.2794315987 650768.3494804711 738874.730447268 786074.2481705268 796561.8137942465 763494.8171272947 793489.3239686396 685434.1129583948 684702.7132218521 767400.6587651656 1.0057109941415547 0.8480164071368286 0.9628278553164145 1.024333559258874 1.0379999087777751 0.994910296735794 1.0339961464790162 0.8931893726301144 0.8922362854413184 1.0 19.54962047784094 -4.988161439988427 24.985387995197442 0.9837405383317108 0.9215032971787973 0.11540273023859537 0.06047349296909967 441.3377613474051 931433.3013910875 0.016564862156543732 0.034440385993387335 1.0276342253547397e-05 4.988161439988427 -0.062237241152913514 VVEVGSK ddPTM_KYSE-520_SHP099_60min_R1 2 VVEVGSK 7 0 P14618;B4DNK4;P14618-3;P14618-2;H3BTN5;H3BQ34 P14618;P14618-2 PKM Pyruvate kinase PKM;Pyruvate kinase 0 ; 112.17 0.021947 1284270000.0 2817900.0 3739400.0 2411000.0 1732890.0 3286000.0 3368900.0 2568200.0 3053900.0 3048400.0 3366300.0 False True 2661585.4696556185 3559753.6110461666 2566416.9177363953 1897583.3445876231 3544589.505217542 3347873.445469994 2827818.719216614 3043306.733685618 2494887.4039104176 3336477.2009417727 0.7977232600014005 1.0669198069273096 0.7691995968118661 0.5687385917254284 1.0623748617904616 1.0034156518513013 0.8475462438102134 0.9121317336820396 0.7477609627322485 1.0 21.669894214880298 -4.785306214831365 24.999676555123433 0.8617039707893607 0.932321990823021 0.03194850974250685 0.15027389414470696 869.1542212819702 910408.0190016915 0.040582878845085046 0.08454945630836469 1.639433424511491e-05 4.785306214831365 0.07061802003366036 VVFPPGS(ph)PIPLR ddPTM_KYSE-520_SHP099_60min_R1 3 VVFPPGSPIPLR 12 0 A0A1B0GTU4;A0A1B0GV30 A0A1B0GTU4 1 VVFPPGS(1)PIPLR;VVFPPGS(1)PIPLR;VVFPPGS(1)PIPLR 152.4 1.4802999999999999e-05 119044000.0 206433.0 223429.0 174450.0 172186.0 159797.0 223186.0 173379.0 208190.0 205245.0 224265.0 True False 194981.74997601678 212695.13546623348 185695.32612986874 188550.50567039126 172372.11477944205 221793.01338735668 190905.8413359773 207467.83748191115 167977.68180540408 222278.18657552992 0.8771969619689253 0.956887127536286 0.8354185761128191 0.8482636491472454 0.7754792201387254 0.99781727035096 0.85885999106398 0.9333702090979304 0.755709250616571 1.0 17.762006849866815 -6.253199865430907 24.980402240640043 0.9018437738467482 0.8622392291602242 0.09061074946940584 0.07788857673663979 2057.515637426304 6237947.425909021 0.025542604811793032 0.02514167269473027 5.582132418838615e-07 6.253199865430907 -0.03960454468652397 VVFPPGS(ph)PIPLRR ddPTM_KYSE-520_SHP099_60min_R1 2 VVFPPGSPIPLRR 13 1 A0A1B0GTU4;A0A1B0GV30 A0A1B0GTU4 1 VVFPPGS(1)PIPLRR;VVFPPGS(1)PIPLRR 125.33 4.5273999999999994e-05 1496870000.0 204950.0 242669.0 271713.0 224292.0 204492.0 197309.0 184554.0 219737.0 251623.0 215478.0 True False 193581.0149423042 231010.81698640506 289228.0547361713 245608.6442441513 220584.35699967906 196077.52134294267 203210.51939346732 218974.78363400133 205934.60609964273 213569.03255934746 0.9064095698823335 1.0816681342704064 1.354260265498929 1.1500199317328488 1.0328480414799002 0.9180990286522734 0.9514980564281871 1.025311493009417 0.9642531205567771 1.0 17.704342946312718 -5.9203896467524695 4.124313903615302 0.9722073051125905 1.1357406559891934 0.31095975495465233 0.10523396863030886 0.27488727351567915 8.994351635590315 0.03614544993262472 0.04110074815772528 1.2011862529557335e-06 5.9203896467524695 0.16353335087660292 VVFQEFR ddPTM_KYSE-520_SHP099_60min_R1 1 VVFQEFR 7 0 P35579;P35579-2 P35579 MYH9 Myosin-9 0 95.541 0.046998000000000005 936730000.0 954470.0 1095700.0 640850.0 636490.0 941010.0 873160.0 772460.0 763550.0 742520.0 784040.0 False True 901523.6464112266 1043060.9273207696 682160.216396254 696981.818232303 1015062.1333855011 867710.2845577444 850547.7952831024 760901.4232639096 607697.0854059709 777094.015573889 1.160121720594445 1.342258345086421 0.877834860036175 0.8969079728629455 1.3062282208361509 1.116609145312919 1.0945236718300646 0.9791626341401934 0.7820123089703408 1.0 19.567729625961736 -7.392484248282245 3.1784596841096935 0.8882309125038751 1.113216951946337 0.2731270793524815 0.14809123823428028 0.3634618029433148 6.810843466358323 0.10284758492095056 0.04222955710822838 4.0505663614079584e-08 7.392484248282245 0.22498603944246198 VVFRDPYR ddPTM_KYSE-520_SHP099_60min_R1 2 VVFRDPYR 8 1 E9PKU4;P62917;G3V1A1;E9PKZ0 E9PKU4 RPL8 60S ribosomal protein L8 0 ; 111.82 0.0011696 4590200000.0 705600.0 648990.0 440110.0 356650.0 589910.0 587230.0 429360.0 434450.0 508610.0 485620.0 False True 666458.961421273 617811.5462461502 468480.19480089727 390545.90876926755 636332.5608712351 583564.8797480919 472763.8989497872 432942.99435139244 416259.2450147219 481317.78460664325 1.3846547597777552 1.2835834577586955 0.973328245462117 0.8114096783031631 1.322063263029596 1.212431575170259 0.9822281953203813 0.8994951115409436 0.8648324627250363 1.0 18.87663020604996 -4.665243864248874 4.454339057603479 1.0153415728185844 1.3595829443688496 0.44505571200315863 0.14679710521410316 0.20721966092037178 7.078776504765658 0.04170680992040505 0.11921848417801303 2.1615044588403603e-05 4.665243864248874 0.34424137155026524 VVGDRENGS(ph)DNLPSSAGSGDKPLSDPAPF ddPTM_KYSE-520_SHP099_60min_R1 1 VVGDRENGSDNLPSSAGSGDKPLSDPAPF 29 2 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;A0A087WZ51;O43399-6 O43399 TPD52L2 Tumor protein D54 1 VVGDRENGS(1)DNLPSSAGSGDKPLSDPAPF 121.79 0.00016523 377780000.0 137020.0 157430.0 174950.0 133840.0 135010.0 150800.0 138620.0 137070.0 183700.0 145480.0 True False 129419.22745740176 149866.82649275244 186227.5569298971 146560.11335953668 145634.5188981802 149858.8012635804 152633.06240082797 136594.5361623784 150344.71070015212 144191.16038172733 0.8975531309601865 1.0393620947081605 1.2915324104257424 1.0164292524696927 1.0100100346833452 1.0393064378346684 1.0585465988119647 0.9473156038190008 1.0426763353740554 1.0 17.137623197515243 VVGDRENGSDNLPSSAGS(ph)GDKPLSDPAPF ddPTM_KYSE-520_SHP099_60min_R1 2 VVGDRENGSDNLPSSAGSGDKPLSDPAPF 29 2 O43399;O43399-5;O43399-7;O43399-2;O43399-4;O43399-3;A0A087WZ51;O43399-6 O43399 TPD52L2 Tumor protein D54 1 VVGDRENGSDNLPS(0.009)S(0.041)AGS(0.949)GDKPLSDPAPF;VVGDRENGSDNLPS(0.081)S(0.154)AGS(0.761)GDKPLS(0.003)DPAPF 122.63 0.00015405 228220000.0 344610.0 363720.0 324038.0 264924.0 296656.0 287720.0 259326.0 255989.0 398700.0 305592.0 True False 325493.79633699666 346246.3452451497 344926.00795913115 290102.2973076948 320001.1394582513 285924.23275568493 285541.2028578642 255101.0339072816 326306.13040909416 302884.6926269781 1.074645910672888 1.143162245150415 1.1388030374447797 0.9577978166924875 1.0565114290947453 0.9440035753402003 0.94273896901593 0.8422381193804828 1.077327901846004 1.0 18.20840914260251 -5.262960162289491 24.93889764874622 0.9686393933244115 1.1212995884861503 0.5162627689258887 0.06391530822650802 99.57652569521123 1632939.2422348538 0.017795327412198875 0.028097714556230835 5.4580792560232684e-06 5.262960162289491 0.1526601951617388 VVGQTT(ph)PESFEK ddPTM_KYSE-520_SHP099_60min_R1 9 VVGQTTPESFEK 12 0 Q02952-3;Q02952-2;Q02952 Q02952-3 AKAP12 A-kinase anchor protein 12 1 VVGQT(0.069)T(0.931)PESFEK;VVGQT(0.112)T(0.888)PESFEK;VVGQT(0.004)T(0.996)PESFEK;VVGQTT(0.999)PESFEK;VVGQT(0.025)T(0.975)PESFEK;VVGQT(0.136)T(0.864)PESFEK;VVGQT(0.01)T(0.99)PESFEK;VVGQT(0.036)T(0.964)PESFEK;VVGQT(0.294)T(0.706)PESFEK 216.06 4.5959e-10 6425180000.0 13690810.0 16235950.0 11716750.0 10136440.0 11059890.0 15326500.0 11345780.0 14735460.0 16212050.0 15539560.0 True False 12931353.4773469 15455950.591342216 12472030.452462826 11099804.209968178 11930240.420833966 15230841.628423508 12492722.166542113 14684346.128542205 13268350.392522605 15401891.58799472 0.8395951499507032 1.0035098937710762 0.8097726426138704 0.7206779859832358 0.7745957925150704 0.9888942238949052 0.8111160953943987 0.953411861435785 0.8614753789635071 1.0 23.87660421104288 -6.253450528279446 24.982456681379727 0.9130762904500525 0.8321341657882222 0.22403458315556546 0.0858184590994723 1167.4615160283786 3650847.1217852393 0.03017310905746275 0.029641561415456125 5.578911494904511e-07 6.253450528279446 -0.08094212466183026 VVHIMDFQR ddPTM_KYSE-520_SHP099_60min_R1 2 VVHIMDFQR 9 0 D6REM6;A0A0R4J2E8;A8MXP9;P43243;D6R991;B3KM87;P43243-2;H0Y8T4;D6RAM9;D6RAY2;D6RBI2;D6RE02;D6RIA2 D6REM6 MATR3 Matrin-3 0 ; 129.38 0.0010042 860040000.0 622780.0 584070.0 375870.0 331670.0 544790.0 492160.0 367910.0 395620.0 365450.0 426550.0 False True 588233.1519188484 556010.4004930562 400099.18161326397 363191.81707977824 587661.8735689183 489088.24688251805 405101.93325558095 394247.6865584023 299093.4922448045 422771.09885087825 1.391375033718501 1.315157072004997 0.9463730673661512 0.8590743739743784 1.3900237626607517 1.1568630121876697 0.9582063068092324 0.9325322559417979 0.7074596467397175 1.0 18.68951723013172 -6.8958923960990735 2.795605736312834 0.8711642319790024 1.1686344502382344 0.3754343281928181 0.176832544516562 0.3269749064711635 5.143211076655909 0.0918645921894578 0.05680395485984431 1.2708889507210627e-07 6.8958923960990735 0.29747021825923203 VVIGMDVAASEFFR ddPTM_KYSE-520_SHP099_60min_R1 3 VVIGMDVAASEFFR 14 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ;; 160.67 3.1705e-07 308903000.0 77339.0 92387.0 109181.0 71474.0 103642.0 70955.0 64575.0 76604.0 105620.0 66352.0 False True 73048.85149852581 87948.58984428583 116218.98195577644 78266.8674705584 111798.0357576859 70512.14352557916 71102.87119126738 76338.27860350804 86442.07046352781 65764.1729010748 1.1107697136008832 1.3373328662793609 1.7672081443280352 1.1901140699859585 1.6999839095651237 1.0721969183988136 1.0811794333401452 1.1607882413170352 1.3144249619554642 1.0 16.005014224078224 -6.294975106968496 24.994048908345498 1.132983481420915 1.42282681662896 0.3458362505050362 0.20298179519735252 761.5887087765964 567606.7563714269 0.07043063497963596 0.062117490256461 5.070197689648581e-07 6.294975106968496 0.28984333520804495 VVIKLS(ph)PQACSFTK ddPTM_KYSE-520_SHP099_60min_R1 3 VVIKLSPQACSFTK 14 1 Q5VUA4 Q5VUA4 ZNF318 Zinc finger protein 318 1 VVIKLS(1)PQACSFTK;VVIKLS(1)PQACSFTK;VVIKLS(1)PQACSFTK 235.72 1.6719000000000001e-18 4227355000.0 4357990.0 4654780.0 4225400.0 3546710.0 3715230.0 4562730.0 3655620.0 4326720.0 5310740.0 4296810.0 True False 4116243.6072623124 4431157.381832771 4497776.044879041 3883788.2520427513 4007597.4642329123 4534252.309611245 4025165.745013098 4311711.61818404 4346443.48886078 4258743.6062675975 0.9665394275448825 1.0404846573321371 1.056127454646403 0.9119563446662945 0.9410281140979999 1.0646924841726046 0.9451533403159696 1.0124374737747748 1.0205929003249021 1.0 22.021996445702044 VVITQS(ph)PGK ddPTM_KYSE-520_SHP099_60min_R1 1 VVITQSPGK 9 0 B3KY49;H0YAP3;B7Z4G6;Q9H7F4;Q8NFB2 B3KY49 FAM11A;TMEM185A;TMEM185B Transmembrane protein 185B;Transmembrane protein 185A 1 VVIT(0.057)QS(0.943)PGK 105.03 0.0022046999999999995 0.0 637370.0 725780.0 536550.0 548770.0 672930.0 793660.0 615690.0 837400.0 832350.0 781310.0 True False 602013.8155344058 690912.4393820096 571136.8715103528 600924.9358062835 725885.7625520511 788706.4735467713 677929.9537553448 834495.25485063 681216.2218359917 774388.2012499827 0.7774057179108128 0.8922042436426196 0.7375330236029544 0.7759996017970023 0.9373667643442383 1.0184897862256639 0.8754394148323292 1.0776187621449103 0.8796831107917231 1.0 19.56269744599584 -5.839158662258809 4.964446565997742 0.9696306274236567 0.7986206672450803 0.6019149402771058 0.0675967195417529 0.13914854329914855 6.147304225160384 0.020150415751574197 0.023268756630620523 1.4482426655381889e-06 5.839158662258809 -0.1710099601785764 VVKPESNDKETEAAYES(ph)DIPEELCGHHLPQQSLK ddPTM_KYSE-520_SHP099_60min_R1 4 VVKPESNDKETEAAYESDIPEELCGHHLPQQSLK 34 2 Q8IYB7;Q8IYB7-4;Q8IYB7-5;Q8IYB7-3;Q8IYB7-2 Q8IYB7 DIS3L2 DIS3-like exonuclease 2 1 VVKPESNDKET(0.001)EAAYES(0.999)DIPEELCGHHLPQQSLK;VVKPES(0.02)NDKET(0.074)EAAY(0.006)ES(0.901)DIPEELCGHHLPQQSLK;VVKPESNDKETEAAYES(1)DIPEELCGHHLPQQSLK;VVKPESNDKET(0.007)EAAYES(0.993)DIPEELCGHHLPQQSLK 194.79 1.0050000000000002e-15 19738530000.0 2744580.0 2407590.0 2349310.0 3234920.0 2633350.0 2346120.0 2350820.0 2461850.0 3138280.0 2081670.0 True False 2592332.6762154144 2291925.7625337364 2500750.2816289025 3542365.8241858375 2840579.66328807 2331476.994830973 2588463.827392259 2453310.4169501103 2568447.461600838 2063228.0233147547 1.2564450690479705 1.1108446263014395 1.2120571518853405 1.716904667907098 1.3767647740284334 1.1300142148540873 1.2545699254480207 1.1890641214773026 1.2448684452600662 1.0 20.97647184276686 -6.258970788241527 24.99983794256973 1.1811990088504247 1.3366030757035572 0.21297382367696482 0.1625109394394696 442.4125839219121 4480394.014191573 0.059863828384681086 0.05720676128399576 5.508447463869355e-07 6.258970788241527 0.15540406685313246 VVLASAS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 VVLASASPR 9 0 O95671-2;O95671 O95671-2 ASMTL N-acetylserotonin O-methyltransferase-like protein 1 VVLASAS(1)PR;VVLASAS(1)PR;VVLASAS(1)PR 135.8 0.00059262 563550000.0 800200.0 785960.0 730280.0 651040.0 767090.0 735260.0 632320.0 763400.0 968600.0 698520.0 True False 755811.3108408469 748201.3018499883 777355.017289313 712914.6458576872 827455.6188549377 730670.9696091508 696241.0764485045 760751.9435788991 792726.6564189846 692331.6562403371 1.0916896606248399 1.08069780589414 1.1228072705943997 1.0297299559132176 1.195172301304815 1.0553770913452274 1.005646744841045 1.0988258831180913 1.1450099808000058 1.0 19.4011037900287 VVLDDKDYFLFR ddPTM_KYSE-520_SHP099_60min_R1 5 VVLDDKDYFLFR 12 1 P61604;B8ZZ54 P61604 HSPE1 10 kDa heat shock protein, mitochondrial 0 ;;;; 200.82 3.6519e-08 35530490000.0 10943139.0 9525726.0 5879395.0 6124271.0 10656498.0 8627732.0 7441210.0 6531595.0 7577894.0 6424778.0 False True 10336101.265063226 9068095.824553778 6258390.209064605 6706319.874510783 11495103.76542047 8573883.124293303 8193440.126011157 6508938.421430728 6201939.4727622215 6367859.465321643 1.623167301563736 1.4240414497111935 0.9828090967061709 1.0531513628767 1.8051754797700843 1.3464309586267278 1.286686706990212 1.022154847618321 0.9739441497628841 1.0 22.60237706617923 -7.218751230293796 2.885999900670273 0.9855868649385993 1.360336449348973 0.3555387475159979 0.22551481282978614 0.3487943455203998 5.7360615600494596 0.1440096280794919 0.06876194868832707 6.042946783558096e-08 7.218751230293796 0.37474958441037365 VVLGDGVQLPPGDYSTT(ph)PGGTLFS(ph)TTPGGTR ddPTM_KYSE-520_SHP099_60min_R1 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 31 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.011)S(0.047)T(0.177)T(0.708)PGGT(0.061)LFS(0.354)T(0.284)T(0.284)PGGT(0.072)R 68.444 0.0016434999999999998 0.0 30503.0 27948.0 25649.0 27393.0 30025.0 25964.0 24280.0 22812.0 30936.0 23497.0 True False 28810.937783777037 26605.33612919675 27302.375579851017 29996.422483994247 32387.796681118863 25801.949045143214 26734.459349964698 22732.870496360825 25318.802233096947 23288.83486038938 1.2371137481325818 1.1424073505046066 1.1723375490238903 1.2880173123221983 1.390700602897287 1.1079106876672582 1.1479517764727587 0.976127428986404 1.087164831769245 1.0 14.507350842920204 -6.814545777778594 1.9400210710531502 1.0285664009048028 1.2354638878802016 0.586943972177767 0.07694618827931553 0.25921735511932886 1.9897803305193524 0.04308676646700741 0.026142370473906305 1.532689641277593e-07 6.814545777778594 0.20689748697539878 VVLGDGVQLPPGDYSTT(ph)PGGTLFSTT(ph)PGGTR ddPTM_KYSE-520_SHP099_60min_R1 9 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 31 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.009)S(0.072)T(0.109)T(0.763)PGGT(0.049)LFS(0.108)T(0.078)T(0.769)PGGT(0.043)R;VVLGDGVQLPPGDYS(0.003)T(0.007)T(0.96)PGGT(0.029)LFS(0.019)T(0.073)T(0.884)PGGT(0.024)R;VVLGDGVQLPPGDYS(0.047)T(0.121)T(0.823)PGGT(0.013)LFS(0.117)T(0.078)T(0.798)PGGT(0.003)R;VVLGDGVQLPPGDYS(0.002)T(0.011)T(0.965)PGGT(0.022)LFS(0.028)T(0.067)T(0.883)PGGT(0.022)R;VVLGDGVQLPPGDYS(0.001)T(0.001)T(0.899)PGGT(0.099)LFS(0.004)T(0.017)T(0.96)PGGT(0.019)R;VVLGDGVQLPPGDY(0.003)S(0.048)T(0.188)T(0.744)PGGT(0.017)LFS(0.012)T(0.043)T(0.902)PGGT(0.043)R;VVLGDGVQLPPGDYS(0.003)T(0.006)T(0.989)PGGT(0.002)LFS(0.077)T(0.035)T(0.855)PGGT(0.033)R;VVLGDGVQLPPGDY(0.001)S(0.032)T(0.157)T(0.786)PGGT(0.024)LFS(0.133)T(0.1)T(0.666)PGGT(0.1)R;VVLGDGVQLPPGDY(0.001)S(0.228)T(0.16)T(0.602)PGGT(0.009)LFS(0.028)T(0.147)T(0.789)PGGT(0.035)R 149.84 2.0313999999999997e-06 4874410000.0 3642991.0 4152391.0 3770294.0 3290509.0 3973184.0 3660600.0 3492666.0 3600083.0 4937921.0 3403581.0 True False 3440907.0271074837 3952903.903494042 4013333.183923688 3603237.986032398 4285850.976475424 3637752.8375693713 3845738.7644153098 3587595.15233869 4041319.02125861 3373427.92028595 1.0200031269130583 1.1717766013980735 1.1896899174248536 1.0681236034018975 1.2704735591659335 1.0783549918745605 1.1400091702831832 1.0634865297594935 1.197985881647664 1.0 21.685783905562435 -10.236843370954807 4.956880520264442 0.9999777845805257 1.1347536623210694 0.23265665786355616 0.07259585305445061 1.6724586786960968e-05 2.5748867537778217e-06 0.06595783166025064 0.015994488055480562 5.796377060615118e-11 10.236843370954807 0.13477587774054378 VVLGDGVQLPPGDYSTTPGGT(ph)LFS(ph)TTPGGTR ddPTM_KYSE-520_SHP099_60min_R1 1 VVLGDGVQLPPGDYSTTPGGTLFSTTPGGTR 31 0 Q13541 Q13541 EIF4EBP1 Eukaryotic translation initiation factor 4E-binding protein 1 2 VVLGDGVQLPPGDY(0.002)S(0.015)T(0.042)T(0.347)PGGT(0.567)LFS(0.339)T(0.355)T(0.293)PGGT(0.039)R 75.661 0.0032774 81280000.0 219150.0 507250.0 356620.0 264410.0 410410.0 326600.0 346980.0 367310.0 598090.0 269200.0 True False 206993.3126353061 482880.94860222685 379608.2958121749 289539.4469022349 442706.932086528 324561.56825388153 382056.1245984657 366035.8873407986 489491.9326219596 266815.09743443085 0.7757931040096941 1.8097961968621121 1.4227391907815963 1.0851689041823749 1.6592274438118035 1.2164287979755033 1.431913442200755 1.3718709730462348 1.8345735954549987 1.0 18.025480776557306 -4.237171223286372 24.05813401407972 1.4275782474499041 0.7757918117395162 0.3477038227226802 0.2670569429637535 4851.457998848802 4809352.258593396 0.06265243605178851 3.7232567955709155 5.792002981052052e-05 4.237171223286372 -0.651786435710388 VVLIGGKPDR ddPTM_KYSE-520_SHP099_60min_R1 3 VVLIGGKPDR 10 1 P61978;P61978-2;P61978-3;Q5T6W2 P61978 HNRNPK Heterogeneous nuclear ribonucleoprotein K 0 ;; 107.79 0.0010475 3153410000.0 3830380.0 3385350.0 3165730.0 2451580.0 3592510.0 3620120.0 2703010.0 3304100.0 3839600.0 3026410.0 False True 3617901.185726773 3222712.704486056 3369798.0211470895 2684577.4261055933 3875220.0984142036 3597525.4882646673 2976256.6296354258 3292638.848282737 3142425.4284393247 2999598.361911352 1.2061285376290969 1.0743814056601015 1.123416409322162 0.8949789612483231 1.2919129932931765 1.1993357290581779 0.9922183807764675 1.0976932412326894 1.0476153968949906 1.0 21.516337910022063 -7.621225063221179 1.0344801386444433 1.0090176075697597 1.1169245407037 0.11937321629532438 0.10493629853766225 1.2373079468011599 2.5695273272874335 0.10007487604752002 0.03528795674873682 2.392075796357259e-08 7.621225063221179 0.1079069331339404 VVNGAAAS(ph)QPPSK ddPTM_KYSE-520_SHP099_60min_R1 2 VVNGAAASQPPSK 13 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VVNGAAAS(0.938)QPPS(0.062)K;VVNGAAAS(0.716)QPPS(0.284)K 112.5 0.00014845 385950000.0 721940.0 723240.0 636010.0 564980.0 610850.0 785520.0 652070.0 748760.0 810110.0 800490.0 True False 681892.5490482905 688494.4647946279 677008.2222519793 618675.5293325696 658920.4197389332 780617.27830615 717987.5991899291 746162.7263218985 663014.4452112161 793398.2813717958 0.859458061680307 0.8677791229950891 0.853301851223352 0.7797792657968349 0.830503966557189 0.9838908107494924 0.9049522995544171 0.9404642584198363 0.8356640804223266 1.0 19.59768574681404 -6.239736983601751 24.688533633953007 0.9275206823834811 0.8374070479414718 0.49725811009847565 0.04751349019995762 624.6597899725999 710610.0084185344 0.015574438984608 0.015560435494102519 5.757885394618579e-07 6.239736983601751 -0.09011363444200926 VVNGAAASQPPS(ph)K ddPTM_KYSE-520_SHP099_60min_R1 2 VVNGAAASQPPSK 13 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VVNGAAASQPPS(1)K;VVNGAAASQPPS(1)K 174.87 4.2935e-07 1034290000.0 1753060.0 1871750.0 1603920.0 1399790.0 1500530.0 1793140.0 1735600.0 1911790.0 1977780.0 2052170.0 True False 1655814.2671615302 1781828.3204459702 1707311.2495627373 1532825.6207377918 1618613.1741521838 1781948.3481284876 1911051.385823671 1905158.4467051423 1618665.0077765202 2033989.3703640993 0.8140722322777563 0.8760263678895281 0.8393904483665595 0.7536055217748776 0.7957825137810036 0.8760853788579561 0.9395581971412066 0.9366609651279075 0.7958079975053002 1.0 20.95588070900972 -6.4636902849316815 4.393186428502723 0.9125438705177689 0.8175456789614957 0.4272385374417994 0.05579263454193304 0.2363061824419381 9.246818926480977 0.020929140773030055 0.01777983661562452 3.438030420189581e-07 6.4636902849316815 -0.0949981915562732 VVNGAAASQPPS(ph)KR ddPTM_KYSE-520_SHP099_60min_R1 4 VVNGAAASQPPSKR 14 1 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 VVNGAAASQPPS(1)KR;VVNGAAASQPPS(1)KR;VVNGAAASQPPS(1)KR;VVNGAAASQPPS(1)KR 221.85 2.5697000000000004e-14 4500610000.0 2444200.0 2683480.0 2077840.0 1907670.0 1913560.0 2457460.0 2120860.0 2568100.0 2681040.0 2652560.0 True False 2308615.3536081 2554561.592814402 2211780.891061547 2088974.3832380997 2064146.2853329496 2442122.0805915003 2335257.226398936 2559191.860499043 2194230.719518432 2629060.382060455 0.8781142378322955 0.9716633403498832 0.8412818914901162 0.794570713359167 0.7851269980019365 0.9288953944365298 0.8882478479131549 0.9734245276228101 0.8346064375283624 1.0 21.32611584627397 VVNTDHGS(ph)PEQLQIPVTDSGR ddPTM_KYSE-520_SHP099_60min_R1 5 VVNTDHGSPEQLQIPVTDSGR 21 0 Q6IQ49-3;Q6IQ49-2;Q6IQ49 Q6IQ49-3 SDE2 Protein SDE2 homolog 1 VVNT(0.376)DHGS(0.624)PEQLQIPVTDSGR;VVNTDHGS(1)PEQLQIPVTDSGR;VVNTDHGS(1)PEQLQIPVTDSGR;VVNTDHGS(1)PEQLQIPVTDSGR;VVNTDHGS(1)PEQLQIPVTDSGR 251.99 5.174499999999999e-27 4169070000.0 2821840.0 2946210.0 2749240.0 3685470.0 2750480.0 2819080.0 2702460.0 2740710.0 3495600.0 3051070.0 True False 2665306.9100014237 2804669.6492486335 2926460.40933953 4035735.9607230416 2966927.127909534 2801485.076035371 2975651.0302679418 2731203.1166965254 2860887.156905018 3024039.89349654 0.8813729328549526 0.9274578868090725 0.9677320777523923 1.3345511642892813 0.9811137525963756 0.9264048010941284 0.9839986028846172 0.9031637190270586 0.9460480872152526 1.0 21.528045741214505 -5.991583480230011 24.999848842094863 0.9485292088439177 1.0340122637705502 0.08484003085673497 0.11654625162637093 503.0028636495012 1494072.3877259132 0.03884334943194493 0.04397547622318797 1.0195687593610353e-06 5.991583480230011 0.08548305492663255 VVPEDGS(ph)PEKR ddPTM_KYSE-520_SHP099_60min_R1 6 VVPEDGSPEKR 11 1 Q02040 Q02040 AKAP17A A-kinase anchor protein 17A 1 VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR;VVPEDGS(1)PEKR 157.22 3.0101e-05 8395820000.0 10525800.0 9229650.0 9297890.0 9100160.0 9144610.0 8516860.0 8788950.0 9340310.0 10735900.0 8968010.0 True False 9941912.891337918 8786243.760012917 9897246.866549999 9965036.470337117 9864238.781286487 8463703.117571196 9677422.837885998 9307910.644654745 8786531.19001504 8888560.40840621 1.118506533626696 0.9884889516758498 1.1134814201397383 1.1211080324000329 1.1097678733169825 0.9522017884433556 1.0887503029999925 1.0471786450201703 0.9885212887460745 1.0 23.083518348353245 -6.227683959764942 24.993068612861347 1.0228677765340692 1.0876187167820976 0.35721646145598207 0.04968862700146461 847.3906823066563 627422.7587766838 0.01661452707981469 0.016613705630607222 5.919922758886662e-07 6.227683959764942 0.06475094024802841 VVPGQFDDADS(ph)SDSENRDLK ddPTM_KYSE-520_SHP099_60min_R1 1 VVPGQFDDADSSDSENRDLK 20 1 E9PFQ8;Q9BRS2 E9PFQ8 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.5)S(0.5)DSENRDLK 115.5 5.3053e-05 844820000.0 434720.0 444800.0 445930.0 256470.0 323880.0 346360.0 267950.0 232860.0 447260.0 365800.0 True False 410605.215007165 423431.1403415884 474675.361313227 280844.83168948244 349367.5133748801 344198.23876428185 295037.0009399936 232052.2630099323 366048.85850707744 362559.2965880939 1.1325187876058143 1.1678948638921578 1.3092351121050108 0.7746176538083704 0.9636148256647764 0.9493570900081699 0.8137620624170262 0.6400394782141484 1.0096248033130648 1.0 18.467857441695706 -5.263184974187297 24.99995781426304 0.8674925461056966 1.199684121577838 0.620867027749115 0.1159620223094476 98.4933684574478 1410604.1200195637 0.03253177636018362 0.051215176817958674 5.455254620496431e-06 5.263184974187297 0.3321915754721414 VVPGQFDDADSS(ph)DSENR ddPTM_KYSE-520_SHP099_60min_R1 4 VVPGQFDDADSSDSENR 17 0 E9PFQ8;Q9BRS2 E9PFQ8 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.213)S(0.787)DSENR;VVPGQFDDADS(0.17)S(0.83)DSENR;VVPGQFDDADS(0.059)S(0.941)DSENR;VVPGQFDDADS(0.049)S(0.951)DSENR 288.75 1.5404999999999998e-37 1485610000.0 2118650.0 2082740.0 2101250.0 2178830.0 2183880.0 2124690.0 1940230.0 1952780.0 2387980.0 2170400.0 True False 2001124.2610759356 1982682.0441435257 2236699.9371188735 2385905.3481108733 2355738.931422547 2111429.021596261 2136367.383220016 1946006.2619622762 1954383.028077023 2151171.9445456495 0.9302484007147064 0.9216752985137547 1.0397587895240463 1.1091188475939342 1.0950956000498158 0.9815249901105498 0.993117908885354 0.9046260885357974 0.9085201362133838 1.0 21.036691414228855 -6.999844291691232 2.5577614083682296 0.9309022855317847 1.0184969500892922 0.2146716790670472 0.06268262250658789 0.4500189124972589 5.881816688919025 0.03750427220581895 0.020937599726878805 1.0003585959107725e-07 6.999844291691232 0.08759466455750753 VVPGQFDDADSS(ph)DSENRDLK ddPTM_KYSE-520_SHP099_60min_R1 1 VVPGQFDDADSSDSENRDLK 20 1 E9PFQ8;Q9BRS2 E9PFQ8 RIOK1 Serine/threonine-protein kinase RIO1 1 VVPGQFDDADS(0.102)S(0.898)DSENRDLK 98.135 0.00016448 253970000.0 616860.0 608760.0 616230.0 469290.0 565470.0 518750.0 420820.0 469450.0 738210.0 521630.0 True False 582641.5461200762 579514.2558326116 655953.1718028607 513891.1805028168 609969.2719158131 515512.28882945766 463360.59240741935 467821.5875204532 604169.6727597131 517008.76402199926 1.1269471364227865 1.120898321576523 1.2687467165932784 0.9939699600159007 1.1798045107990824 0.9971055129106516 0.8962335353907132 0.9048620063634877 1.168586907617692 1.0 18.979829210884006 -6.323383317211932 6.492604404079009 0.9802399737214653 1.1362397487569535 0.36732311411631957 0.09424389561966785 0.2535915390033176 21.571746684927245 0.033046056064088586 0.029184855645181928 4.7491587042204054e-07 6.323383317211932 0.15599977503548823 VVPQQITHT(ph)SPR ddPTM_KYSE-520_SHP099_60min_R1 1 VVPQQITHTSPR 12 0 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 VVPQQITHT(0.65)S(0.35)PR 154.07 1.5815e-05 631680000.0 215030.0 240520.0 235640.0 190830.0 212130.0 257150.0 168950.0 256250.0 290180.0 241850.0 True False 203101.85724832208 228965.05817211972 250829.73143733054 208966.4258248684 228823.42414540393 255545.03146505065 186029.1147931026 255361.1285591994 237490.62684251604 239707.39715645285 0.8472907371972381 0.9551856174996478 1.0463996289343476 0.8717562674483493 0.9545947553552336 1.066070694924199 0.7760674764312119 1.0653034974658275 0.990752182284596 1.0 17.87091490439285 -4.274027010028387 4.961491577844115 0.9679500595366917 0.8422169613748504 0.15645286736365194 0.08549646417902401 0.2962531629571354 22.10468432615692 0.020569577434651567 0.12503918982439519 5.320751669460997e-05 4.274027010028387 -0.1257330981618413 VVPQQITHTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 VVPQQITHTSPR 12 0 H7BXF5;A0A2R8YDB8;Q9H0E3-3;Q9H0E3 H7BXF5 SAP130 Histone deacetylase complex subunit SAP130 1 VVPQQITHT(0.01)S(0.99)PR;VVPQQITHT(0.012)S(0.988)PR;VVPQQITHT(0.111)S(0.889)PR 203.78 1.2650999999999999e-08 1399840000.0 1108100.0 1035590.0 979600.0 856530.0 1071270.0 1020160.0 935170.0 993620.0 1246000.0 1033170.0 True False 1046631.4840574156 985838.7019477199 1042746.5834154186 937934.3536748651 1155572.8543074843 1013792.8030308632 1029706.1099796736 990173.364132651 1019757.8091039163 1024016.9175940977 1.0220841727072736 0.9627172022352164 1.0182903871015392 0.9159363849950044 1.1284704719746956 0.9900156780737024 1.0055557601518368 0.9669502008414458 0.9958407830798459 1.0 19.965808119356907 -2.563887153362966 10.79203645310399 1.000153311348315 1.0189706701922019 0.0 0.05198287109348581 0.0 0.0 0.011407935521283281 0.0 0.0027296869697563263 2.563887153362966 0.01881735884388691 VVPS(ph)PLQFCAATPK ddPTM_KYSE-520_SHP099_60min_R1 2 VVPSPLQFCAATPK 14 0 Q9Y2F5 Q9Y2F5 ICE1 Little elongation complex subunit 1 1 VVPS(1)PLQFCAATPK;VVPS(1)PLQFCAATPK 148.7 3.226e-06 704590000.0 320840.0 412910.0 299334.0 271279.0 244574.0 337980.0 258178.0 295460.0 361130.0 362700.0 True False 303042.36562131654 393073.1838094543 318629.54859133373 297061.2745969945 263820.5823642953 335870.54145268444 284277.15181446396 294435.11822088226 295557.8953464666 359486.76017632976 0.8429861658122625 1.0934288195110449 0.886345712523723 0.8263483040412524 0.7338812206460406 0.9343057343417558 0.7907861521103721 0.8190430103085315 0.8221662884093263 1.0 18.455579111917267 -4.989972421660024 24.980159013857545 0.8373193106812088 0.9736274812728211 0.2174504976228122 0.0899108783982412 247.9815987086923 617748.0391519852 0.021841374779439104 0.04538444532446673 1.0233579749578541e-05 4.989972421660024 0.13630817059161227 VVPSFLPVDQGGS(ph)LVGR ddPTM_KYSE-520_SHP099_60min_R1 5 VVPSFLPVDQGGSLVGR 17 0 Q14126 Q14126 DSG2 Desmoglein-2 1 VVPSFLPVDQGGS(1)LVGR;VVPSFLPVDQGGS(1)LVGR;VVPSFLPVDQGGS(1)LVGR;VVPSFLPVDQGGS(1)LVGR;VVPSFLPVDQGGS(1)LVGR 226.44 1.7513999999999998e-18 1025382000.0 628234.0 732710.0 597654.0 710500.0 690660.0 739140.0 596240.0 861400.0 1084000.0 678010.0 True False 593384.60766657 697509.5117798676 636179.7331202098 778025.7063803866 745011.01268215 734526.7530899391 656513.7579416373 858412.0044522706 887172.9254162486 672003.358883798 0.8830083954523468 1.03795539495284 0.9466912995448542 1.157770561850602 1.1086417989332944 1.0930403001407507 0.9769501138091199 1.2773924313088234 1.320191206915764 1.0 19.358108918501692 -3.8704315163090977 0.440487966758723 1.164146409527353 0.6158103903148844 0.3504573236079026 0.10784514562930475 8.322271228534897 0.9732891991617958 0.07942248697439179 2.56170485185688 0.0001347623214655951 3.8704315163090977 -0.5483360192124687 VVQEYIDAFSDY(ph)ANFK ddPTM_KYSE-520_SHP099_60min_R1 4 VVQEYIDAFSDYANFK 16 0 P18433-6;P18433 P18433-6 PTPRA Receptor-type tyrosine-protein phosphatase alpha 1 VVQEYIDAFSDY(1)ANFK;VVQEYIDAFSDY(1)ANFK;VVQEYIDAFS(0.004)DY(0.996)ANFK;VVQEYIDAFSDY(1)ANFK 246.31 4.4875e-27 180187000.0 207004.0 238691.0 199467.0 274690.0 236499.0 252514.0 223077.0 288251.0 365365.0 218128.0 True False 195521.07546775657 227223.92607750473 212324.9619784841 300796.45501144003 255110.12580476052 250937.9664606874 245627.8001817165 287251.124559289 299023.92610212916 216195.55562101607 0.9043713914753122 1.0510110877386445 0.9820967936578816 1.3913165520327655 1.1799970867669476 1.1606990057676008 1.1361371397120403 1.3286634118549185 1.3831178223955194 1.0 17.721977340018974 -5.234309365480446 24.14106318686523 1.2310537336007734 0.9863447860190191 0.47764617476821536 0.11798571539526478 424.8247470142296 378020.0483325288 0.03174669200384599 0.054964000018343784 5.830296407809892e-06 5.234309365480446 -0.24470894758175432 VVQGS(ph)PEVPGITVR ddPTM_KYSE-520_SHP099_60min_R1 1 VVQGSPEVPGITVR 14 0 Q8N201 Q8N201 INTS1 Integrator complex subunit 1 1 VVQGS(1)PEVPGITVR 161.14 4.1169e-08 355810000.0 257140.0 242670.0 194070.0 164210.0 161590.0 249040.0 197300.0 181610.0 247380.0 207190.0 True False 242875.93160411826 231011.76894490412 206580.06272297894 179816.4690284631 174306.21367866787 247485.64898330258 217245.0094624394 180980.03729809247 202462.02794231707 205354.45779138093 1.1827156528097154 1.124941583589037 1.0059682411805402 0.8756394721712746 0.8488065735380583 1.205163265726243 1.0579025739150891 0.8813056178305593 0.9859149400496469 1.0 17.647756739814234 -4.7143456078015795 3.2500259101146995 0.9788919553529639 1.170079105953767 0.3383919612132319 0.09769285836586905 0.2911549182137 6.1186592287623345 0.02797322948047984 0.0848300053404188 1.9304314848793633e-05 4.7143456078015795 0.19118715060080305 VVRPDSELGERPPEDNQSFQYDHEAFLGK ddPTM_KYSE-520_SHP099_60min_R1 1 VVRPDSELGERPPEDNQSFQYDHEAFLGK 29 2 Q15293 Q15293 RCN1 Reticulocalbin-1 0 129.57 0.00011554 835570000.0 151910.0 108050.0 79036.0 94467.0 131510.0 128220.0 91095.0 95828.0 83311.0 82086.0 False True 143483.24947492266 102859.1158136436 84130.7870220712 103445.11527746085 141859.08881045599 127419.73141920588 100303.77160152537 95495.59503442324 68183.82249940318 81358.78190194156 1.763586500690942 1.2642656810867143 1.0340713694985089 1.2714683388713839 1.7436235584430577 1.566146007111804 1.2328573419697635 1.1737589084054898 0.8380634629164233 1.0 16.312010458976136 -7.362590025657118 2.009974886848583 0.9322690258758246 1.4145782866609204 0.4514087997581089 0.21945941256171406 0.3641520246683034 2.70214959766091 0.18474973287160407 0.06863440657387791 4.339203062277586e-08 7.362590025657118 0.48230926078509584 VVS(ph)GCRPK ddPTM_KYSE-520_SHP099_60min_R1 2 VVSGCRPK 8 1 B8ZZX2;Q9H8M1 B8ZZX2 COQ10B Coenzyme Q-binding protein COQ10 homolog B, mitochondrial 1 VVS(1)GCRPK;VVS(1)GCRPK 88.49600000000001 0.0030647 937360000.0 599080.0 439830.0 347210.0 402250.0 434380.0 372020.0 351560.0 356190.0 462510.0 415860.0 True False 565847.8381636278 418699.9066017103 369591.712155642 440479.7190591275 468563.2347158842 369698.085186188 387099.1156949583 354954.4600253707 378529.84292829316 412175.8039341845 1.37283128403622 1.0158284465154281 0.8966846394861591 1.0686695212450232 1.136804320495008 0.8969427163299006 0.9391602127056677 0.8611724818326532 0.9183698783753356 1.0 18.652900290889104 -6.2695356206250334 24.79138945406695 0.9154542769685906 1.0807576251760416 0.35194823198227654 0.11734593663088998 701.0384765149548 2146633.164789483 0.04215141765342951 0.03780536970035494 5.376063371000835e-07 6.2695356206250334 0.16530334820745096 VVS(ph)STSEEEEAFTEK ddPTM_KYSE-520_SHP099_60min_R1 1 VVSSTSEEEEAFTEK 15 0 Q8N573-3;Q8N573-2;Q8N573-5;Q8N573-8;Q8N573 Q8N573-3 OXR1 Oxidation resistance protein 1 1 VVS(0.985)S(0.01)T(0.002)S(0.003)EEEEAFTEK 131.24 3.8108e-05 658420000.0 253620.0 226850.0 209040.0 180050.0 178670.0 251200.0 262660.0 328620.0 375990.0 293790.0 True False 239551.19302106422 215951.78549120828 222515.05287582593 197161.8978659938 192730.31250676158 249632.16762209116 289212.23611456883 327480.09392048453 307719.69393658283 291187.2491651616 0.822670613867404 0.7416251436501614 0.7641648235414844 0.677096605126976 0.661877582412425 0.8572908612509322 0.9932173779715453 1.1246374793517748 1.056775991458486 1.0 18.15158765700314 -6.68813784975157 2.4648345850056512 1.0655022934635978 0.7334212101133967 0.8844600512024274 0.052923433803787806 0.08970639234864577 1.1115075476609375 0.02473444633983079 0.017299018722432967 2.0505112211482058e-07 6.68813784975157 -0.33208108335020114 VVSAPVGKET(ph)PSKR ddPTM_KYSE-520_SHP099_60min_R1 2 VVSAPVGKETPSKR 14 2 Q13416 Q13416 ORC2 Origin recognition complex subunit 2 1 VVSAPVGKET(0.964)PS(0.036)KR;VVSAPVGKET(0.974)PS(0.026)KR 144.3 3.6489e-06 2798050000.0 1960220.0 2007440.0 1463600.0 1202540.0 1339690.0 1658040.0 1326100.0 1284800.0 1754070.0 1610540.0 True False 1851482.6889983062 1910999.5691711314 1557945.9978427973 1316829.0400431657 1445115.9812065982 1647691.5573412918 1460155.1294888027 1280343.3286745744 1435575.1045063452 1596271.868581159 1.1598792946492194 1.1971642216997265 0.9759903864168028 0.8249403287509068 0.9053069277547845 1.0322123629265214 0.9147283481144455 0.8020835008591634 0.89932995297496 1.0 20.606274953999222 -4.855368278998884 4.1162669684735675 0.9075020572335363 1.1796874732854679 0.7165405785537446 0.06605373421303533 0.10915530824728344 3.372740823256466 0.018416788029765062 0.0425670508841191 1.395184751354684e-05 4.855368278998884 0.2721854160519316 VVSQS(ph)QPGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 VVSQSQPGSR 10 0 Q7Z460-4 Q7Z460-4 CLASP1 CLIP-associating protein 1 2 VVS(0.027)QS(0.973)QPGS(0.999)R 108.58 0.0021599 315630000.0 852590.0 750140.0 793930.0 736790.0 692960.0 856200.0 753460.0 805750.0 979950.0 767780.0 True False 805295.1331039722 714102.1484169047 845107.9981329136 806814.3000760094 747492.0095969408 850856.138208736 829627.0898609714 802955.0413134645 802015.7825292004 760978.0665238014 1.0582369828116256 0.9384004346918577 1.1105550019245933 1.060233317579823 0.9822779952272924 1.1181086231506034 1.0902115663474552 1.055161872117309 1.0539275937253514 1.0 19.537495346334673 -6.2607276409797885 24.999867743290054 1.068600148243701 1.031016666035994 0.09048925911261008 0.05185954654708198 157.592356768187 5535487.366249376 0.01763470242118751 0.016570601219072282 5.486209135940717e-07 6.2607276409797885 -0.03758348220770702 VVSQSQPGS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 6 VVSQSQPGSR 10 0 Q7Z460-4 Q7Z460-4 CLASP1 CLIP-associating protein 1 1 VVSQSQPGS(0.999)R;VVS(0.001)QS(0.001)QPGS(0.999)R;VVSQSQPGS(1)R;VVSQSQPGS(1)R;VVSQSQPGS(1)R;VVS(0.002)QS(0.009)QPGS(0.989)R 161.48 7.326e-05 3993790000.0 3137270.0 2840319.0 2601556.0 2663975.0 2846687.0 2645305.0 2465604.0 2570927.0 3041521.0 2577449.0 True False 2963239.3791073086 2703865.81183426 2769256.4623967763 2917158.383046711 3070705.0714665824 2628794.6702689347 2714851.3142961413 2562009.054295874 2489257.456904943 2554614.807084981 1.1599554542974724 1.0584240740855904 1.0840211427243385 1.1419171199337959 1.2020227327228645 1.02903759227349 1.0627243319684674 1.0028944665905741 0.9744159667442718 1.0 21.28467434275616 -6.790966351969191 1.601228002262978 0.993657866284261 1.1209302593399038 0.618931000321631 0.044201661713787685 0.2805760761536325 1.4623722008664277 0.02664733317240384 0.01571099651930604 1.6182054072215885e-07 6.790966351969191 0.12727239305564275 VVSS(ph)PPCAAAVSR ddPTM_KYSE-520_SHP099_60min_R1 1 VVSSPPCAAAVSR 13 0 P12755 P12755 SKI Ski oncogene 1 VVS(0.045)S(0.955)PPCAAAVSR 98.0 0.0016920000000000001 398280000.0 391650.0 397590.0 316180.0 235740.0 277400.0 330360.0 281600.0 338470.0 416590.0 359580.0 True False 369924.3937650815 378489.1796052428 336561.46870588715 258144.65872218437 299229.8018099044 328298.1006991802 310066.87615115586 337295.926569492 340947.7573792941 356394.40094900643 1.0379635392139928 1.0619953023880353 0.9443511677223094 0.7243229917046878 0.8396029820140714 0.921165146884992 0.8700105145465536 0.9464119685139298 0.9566585683484896 1.0 18.44311514635121 -4.900110262395811 4.666602784689823 0.8860251314305418 1.0478237776750208 0.4159914054301115 0.07222266833167434 0.19233298976626897 7.099615588651387 0.020065954344337215 0.04412444936670417 1.258605825619531e-05 4.900110262395811 0.16179864624447893 VVSS(ph)TSEEEEAFTEK ddPTM_KYSE-520_SHP099_60min_R1 2 VVSSTSEEEEAFTEK 15 0 Q8N573-3;Q8N573-2;Q8N573-5;Q8N573-8;Q8N573 Q8N573-3 OXR1 Oxidation resistance protein 1 1 VVSS(1)TSEEEEAFTEK;VVS(0.004)S(0.995)T(0.001)SEEEEAFTEK 378.79 7.751199999999998e-69 1253800000.0 1141090.0 1205230.0 950660.0 899700.0 1062570.0 1833800.0 1537680.0 2114850.0 2500580.0 2122110.0 True False 1077791.4629934805 1147328.9417128894 1011941.064709781 985207.2174953318 1146188.2138037141 1822354.5739864297 1693123.7007106135 2107514.078959703 2046537.7064920354 2103309.756376598 0.5124264078203142 0.5454873863607277 0.48111841902595764 0.4684080480815923 0.5449450373768384 0.8664223462386378 0.804980671809074 1.0019989079451368 0.9730082315681525 1.0 21.00422990207588 -6.4061947383411715 1.4948370850328392 0.9683163431381374 0.4943880519615791 0.9371032395486214 0.05466731981641256 0.0928517630721692 0.41665544414625477 0.026806165840289713 0.021645925553597147 3.9246891224925945e-07 6.4061947383411715 -0.4739282911765583 VVSSVSSS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 VVSSVSSSPR 10 0 P29375-2;P29375 P29375-2 KDM5A Lysine-specific demethylase 5A 1 VVS(0.001)S(0.006)VS(0.022)S(0.08)S(0.892)PR;VVSSVS(0.001)S(0.001)S(0.997)PR;VVS(0.014)S(0.011)VS(0.06)S(0.06)S(0.856)PR 105.13 0.0013618 1729890000.0 3969500.0 3914520.0 3785260.0 2903310.0 3125330.0 3463080.0 3295150.0 3556830.0 4080090.0 3829080.0 True False 3749303.921997933 3726460.583385688 4029263.916230143 3179239.709488017 3371275.690304789 3441465.633155695 3628255.919564919 3544492.186900367 3339248.506698875 3795157.330179158 0.98791791638871 0.9818988408603795 1.0616856076530385 0.8377095948583334 0.8883098635981032 0.9068044704732264 0.9560225318494608 0.9339513170414577 0.8798709028859257 1.0 21.855728263861995 -5.253873801337186 24.999906381900512 0.9122122588608975 1.0076405909252917 0.4747043158161296 0.04611755178677661 515.2493113739253 1702599.6308684088 0.012559870829186082 0.021208858596740245 5.573476812536858e-06 5.253873801337186 0.09542833206439416 VVT(ph)EKSPTDWALFTYEGNSNDIR ddPTM_KYSE-520_SHP099_60min_R1 1 VVTEKSPTDWALFTYEGNSNDIR 23 1 Q9UJU6;F8WC20;F8WBB2;F8WFE1;F8WBG8;B4DDD6;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3 Q9UJU6;B4DDD6 DBNL Drebrin-like protein 1 VVT(0.485)EKS(0.449)PT(0.066)DWALFTYEGNSNDIR 69.42699999999999 0.05064 208480000.0 97196.0 83672.0 81573.0 75612.0 85170.0 85850.0 91013.0 76368.0 95238.0 80638.0 True False 91804.34412457762 79652.2715257676 86831.32610141476 82798.14174642322 91872.39444898891 85314.17830555938 100213.48224128231 76103.09723242516 77945.17995460588 79923.61005541477 1.1486511189988213 0.9966050266065429 1.0864289793868238 1.0359659891365693 1.1495025610741243 1.067446506062565 1.253865812264982 0.9521979447582427 0.9752459867686513 1.0 16.286334128988816 VVTEKS(ph)PTDWALFTYEGNSNDIR ddPTM_KYSE-520_SHP099_60min_R1 1 VVTEKSPTDWALFTYEGNSNDIR 23 1 Q9UJU6;F8WC20;F8WBB2;F8WFE1;F8WBG8;B4DDD6;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3 Q9UJU6;B4DDD6 DBNL Drebrin-like protein 1 VVT(0.021)EKS(0.94)PT(0.038)DWALFTYEGNSNDIR 113.5 0.00014691 177010000.0 82174.0 68220.0 55779.0 56017.0 47806.0 52195.0 54738.0 67856.0 83208.0 63731.0 True False 77615.64441019228 64942.60879969235 59374.6035895555 61340.838837874806 51568.060221068095 51869.23164424779 60271.45123139898 67620.62337370946 68099.52470298462 63166.392921967694 1.228749035995682 1.0281196344378711 0.9399714126925632 0.9710992823929636 0.8163844385537806 0.8211523445437862 0.9541695899250577 1.0705158272571347 1.078097411500306 1.0 15.946869569906607 -4.283159501899813 2.2403296790086777 0.949316611165887 1.292682489050355 0.49301100744841697 0.08291030814626583 0.548737924883871 3.32467442234036 0.024916030179965635 0.36665897962069316 5.210033287914627e-05 4.283159501899813 0.34336587788446804 VVTEKSPT(ph)DWALFTYEGNSNDIR ddPTM_KYSE-520_SHP099_60min_R1 2 VVTEKSPTDWALFTYEGNSNDIR 23 1 Q9UJU6;F8WC20;F8WBB2;F8WFE1;F8WBG8;B4DDD6;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3 Q9UJU6;B4DDD6 DBNL Drebrin-like protein 1 VVT(0.055)EKS(0.315)PT(0.63)DWALFTYEGNSNDIR;VVT(0.001)EKS(0.377)PT(0.623)DWALFTYEGNSNDIR 213.37 2.1989e-20 1813250000.0 689580.0 645870.0 596130.0 602930.0 563604.0 627260.0 581614.0 618850.0 702360.0 694810.0 True False 651327.6227563508 614841.4357293658 634557.4936417239 660232.2859224861 607956.4283319016 623345.0376697171 640409.2191256321 616703.3537906758 574829.129054757 688654.5239540006 0.9457973484537174 0.8928155037727376 0.9214453279103265 0.9587278714611146 0.8828177368838583 0.9051636429986687 0.9299426589818045 0.8955192078747879 0.8347133563492763 1.0 19.393420884685288 -5.780439734455703 24.999717856067694 0.9037547741109777 0.926472806621086 0.051993921600339554 0.042185015703334446 748.8178956875884 985253.2328421979 0.012675182038687595 0.014393711301287497 1.6579073829648325e-06 5.780439734455703 0.022718032510108288 VVTTSAR ddPTM_KYSE-520_SHP099_60min_R1 1 VVTTSAR 7 0 F8VTQ9;F8VXU8;Q8IUR5 F8VTQ9 TMTC1 Transmembrane and TPR repeat-containing protein 1 0 95.95700000000001 0.046281 1238900000.0 205510.0 280760.0 205770.0 243570.0 239330.0 197530.0 161390.0 229070.0 215210.0 186570.0 False True 194109.95062597172 267271.8681706481 219034.26344364078 266718.81956800935 258163.90939857374 196297.14199996684 177704.87621461292 228275.40963533986 176133.28900261162 184917.1349492637 1.0497131630296472 1.4453602054995083 1.184499551670741 1.4423694139604197 1.396105933987172 1.0615411170729283 0.9609973476139481 1.2344740777969143 0.9524984747948743 1.0 17.496519389611354 -6.275744502123668 22.772233709851314 1.0515001924344005 1.3125763194085072 0.48461646637923406 0.13460325034270784 212.6083399242366 338447.913419401 0.045297225896575144 0.04019249145478172 5.299751395396784e-07 6.275744502123668 0.26107612697410665 VVVS(ph)PTK ddPTM_KYSE-520_SHP099_60min_R1 11 VVVSPTK 7 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VVVS(1)PTK;VVVS(0.991)PT(0.009)K;VVVS(0.996)PT(0.004)K;VVVS(0.998)PT(0.002)K;VVVS(1)PTK;VVVS(0.985)PT(0.015)K;VVVS(0.998)PT(0.002)K;VVVS(1)PTK;VVVS(1)PTK;VVVS(0.998)PT(0.002)K;VVVS(0.998)PT(0.002)K 152.11 0.00079603 390840900000.0 664538000.0 685210000.0 524515000.0 473196000.0 491173000.0 658704000.0 538162000.0 695682000.0 712009000.0 683780000.0 True False 627674752.4163398 652291483.0788214 558326076.1536732 518168405.5684345 529825520.707917 654592784.0021571 592564666.9149797 693268841.5154002 582726113.8862531 677722241.1727902 0.9261533918824268 0.9624761346920515 0.8238272882818434 0.7645734108884347 0.7817738426159075 0.9658717749463145 0.8743473814428071 1.022939486707278 0.8598302940122676 1.0 29.33611887702172 -6.280841336821272 24.88941180835408 0.9416408589340303 0.8515160527831991 0.28901895321694926 0.07272985513611237 1171.847580958317 1503276.6159621757 0.02730543326414503 0.024117118220090487 5.237917613441514e-07 6.280841336821272 -0.09012480615083118 VVVS(ph)PTKK ddPTM_KYSE-520_SHP099_60min_R1 11 VVVSPTKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VVVS(0.943)PT(0.057)KK;VVVS(0.985)PT(0.015)KK;VVVS(0.679)PT(0.321)KK;VVVS(0.956)PT(0.044)KK;VVVS(0.914)PT(0.086)KK;VVVS(0.863)PT(0.137)KK;VVVS(0.736)PT(0.264)KK;VVVS(0.54)PT(0.46)KK;VVVS(0.877)PT(0.123)KK;VVVS(0.981)PT(0.019)KK;VVVS(0.853)PT(0.147)KK 163.38 5.4041000000000007e-05 356231460000.0 459814640.0 429649250.0 369032520.0 351317560.0 350467740.0 447777120.0 376581550.0 439886430.0 498895920.0 456047860.0 True False 434307805.3014397 409008255.11332774 392820946.7121084 384706675.2749242 378047557.2493331 444982376.89959085 414650088.1557531 438360566.64459467 408308997.0706923 452007630.76026607 0.9608417551954694 0.9048702439500537 0.8690582193300429 0.8511065944348257 0.8363742811453561 0.9844576653521117 0.9173519647407755 0.9698078899846948 0.9033232389991432 1.0 28.751771887418716 -6.268068756144711 24.996699346862805 0.9507488826903071 0.8828771297268966 0.4174661160982098 0.04149068978064994 583.8078174973547 2201296.1457948675 0.014823405076693072 0.013372725865388705 5.394252156408082e-07 6.268068756144711 -0.06787175296341053 VVVSPT(ph)KK ddPTM_KYSE-520_SHP099_60min_R1 1 VVVSPTKK 8 1 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 1 VVVS(0.317)PT(0.683)KK 104.22 0.0023557 20333000000.0 104890.0 94678.0 105600.0 84509.0 100740.0 134430.0 101760.0 111530.0 158570.0 128300.0 True False 99071.54260696893 90129.52676542464 112407.14496597394 92540.70995144262 108667.66486780727 133590.97250572327 112046.89388189475 111143.12846129775 129777.68522440473 127163.36181588956 0.7790887343038894 0.7087696131839966 0.8839585817864736 0.7277309173803181 0.8545516830951604 1.050546089675891 0.8811256031758516 0.8740184820075273 1.0205587786543444 1.0 16.95632353703667 -6.0148132310695654 7.11746292715971 0.9524688365097268 0.779197619538772 0.633809692616083 0.06808613899878235 0.10916931634575036 29.026777785544546 0.021676081167726666 0.022855309045665753 9.664664198249184e-07 6.0148132310695654 -0.17327121697095482 VVVSPTK ddPTM_KYSE-520_SHP099_60min_R1 3 VVVSPTK 7 0 P19338;C9J1H7;C9JWL1;C9JYW2;C9JLB1 P19338 NCL Nucleolin 0 ;; 102.72 0.034616 809280000.0 1745990.0 1751050.0 1365620.0 1324850.0 1403460.0 1863500.0 1504220.0 1842110.0 2001970.0 1838760.0 False True 1649136.4541552241 1666926.929620366 1453650.050269256 1450763.345669323 1513904.3174049328 1851869.2052697728 1656281.2373724845 1835720.1503617044 1638462.713556798 1822470.0169336316 0.9048908562731545 0.9146525946281563 0.7976263185471069 0.7960423667821336 0.8306881887429505 1.0161315072747295 0.9088112407792774 1.0072704260179637 0.8990341121296292 1.0 20.79746364901933 -6.249828451435284 24.64871945824331 0.9631139707206555 0.8466678967191535 0.5658697825593916 0.05139207568300992 487.1674065712302 1034203.0362918717 0.017555658848025082 0.017411562664802413 5.625634967964668e-07 6.249828451435284 -0.11644607400150198 VVWVEESDKR ddPTM_KYSE-520_SHP099_60min_R1 2 VVWVEESDKR 10 1 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;A0A2R8Y7T2;A0A2R8YDH3;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5 A0A0D9SG12;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 0 ; 174.98 7.4514e-05 1391240000.0 765510.0 711710.0 424770.0 358210.0 665760.0 605960.0 439060.0 472660.0 520520.0 510920.0 False True 723045.634293649 677518.3833015104 452151.35385602975 392254.17070023634 718151.52434377 602177.9788705509 483444.46961266425 471020.4527796735 426006.6892413895 506393.6462897446 1.4278331483644684 1.3379282861575497 0.8928851243866538 0.7746032628454411 1.418168512984982 1.1891499494170215 0.9546811520143966 0.9301468457014733 0.841255991979094 1.0 18.949899777852785 -4.6667791043541955 5.730343805610567 1.0102472666876072 1.401921391858135 0.43357276054726734 0.17545971614386613 0.20321085719693657 9.83762352241281 0.048716518261322075 0.13287072373152364 2.153876984811863e-05 4.6667791043541955 0.3916741251705278 VVYAFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 VVYAFSPK 8 0 A7KAX9;A7KAX9-2;G3V174 A7KAX9 ARHGAP32 Rho GTPase-activating protein 32 1 VVYAFS(1)PK;VVYAFS(1)PK;VVYAFS(1)PK 136.96 0.00069243 1835435000.0 3631430.0 3233470.0 2861900.0 2742640.0 3183940.0 3165760.0 2854140.0 3279900.0 4082500.0 3117620.0 True False 3429987.3388237697 3078129.2476625796 3046382.6532019023 3003299.6809952133 3434497.963859505 3146001.317560953 3142664.3249220867 3268522.792434416 3341220.911450033 3090000.3122716607 1.1100281528134095 0.9961582319063412 0.9858842541547538 0.9719415461117841 1.1114879018683923 1.0181233008511001 1.0170433680673998 1.0577742595862432 1.0813011565664483 1.0 21.55917555325083 -5.733294598987371 24.999988126897865 1.0475066481205606 1.0124342593258968 0.09837266907729592 0.04639334423552028 501.5930122496185 445545.04816495755 0.013770016125086399 0.01777311347194407 1.848014612883424e-06 5.733294598987371 -0.03507238879466379 VWDAVSGDELMTLAHK ddPTM_KYSE-520_SHP099_60min_R1 2 VWDAVSGDELMTLAHK 16 0 Q9Y3F4-2;Q9Y3F4 Q9Y3F4-2 STRAP Serine-threonine kinase receptor-associated protein 0 ; 208.47 1.704e-17 1196370000.0 1531340.0 1075620.0 664160.0 783310.0 1340660.0 1097610.0 808780.0 860520.0 834340.0 801440.0 False True 1446393.5175493925 1023945.6006614635 706972.816293573 857755.5468892609 1446162.3146880532 1090759.408852242 890539.375332144 857535.0569668785 682844.8879998088 794339.8651108852 1.820874893830847 1.2890522629359997 0.8900130124967147 1.0798344443779404 1.820583830935109 1.373164632370526 1.1211062348077292 1.0795568680758223 0.8596381951754211 1.0 19.599396883317528 -7.024201715765033 2.387966626210288 0.9710226046022514 1.3571303173133944 0.302588769786713 0.2750156695138901 0.45582195525367986 5.14040450186391 0.16505814883955888 0.08863566122162768 9.457977668051359e-08 7.024201715765033 0.38610771271114297 VWGS(ph)IK ddPTM_KYSE-520_SHP099_60min_R1 1 VWGSIK 6 0 H7BYH4;P00441 H7BYH4 SOD1 Superoxide dismutase [Cu-Zn] 1 VWGS(1)IK 89.355 0.015676 183900000.0 382850.0 336210.0 310370.0 309260.0 325290.0 344600.0 304520.0 319610.0 398690.0 327760.0 True False 361612.54730744596 320057.96693850117 330376.9468095582 338651.97741759085 350888.47235307796 342449.22357712 335303.85342879896 318501.3475075348 326297.94615701545 324856.3013934215 1.1131461688025264 0.9852293631542974 1.016994115220966 1.0424670106905574 1.0801344189661566 1.0541560133149221 1.0321605337208 0.9804376462496553 1.0044377922096948 1.0 18.309442164539927 -7.111167207318585 4.557199909899494 0.9947263425515495 1.0453772910543455 0.34791734432694565 0.032647410376004785 0.2822788564749347 9.350382720623307 0.016282405829761377 0.009187009342344805 7.741636803715015e-08 7.111167207318585 0.050650948502796056 VWHDKDK ddPTM_KYSE-520_SHP099_60min_R1 1 VWHDKDK 7 1 E9PS41;Q6RFH5-2;Q6RFH5 E9PS41 WDR74 WD repeat-containing protein 74 0 73.248 0.023806 398500000.0 817450.0 836780.0 419710.0 432140.0 964540.0 1070600.0 645200.0 742050.0 597050.0 787210.0 False True 772104.4189538248 796579.8327676132 446765.1781597436 473210.455672371 1040443.8105181161 1063917.9882810947 710423.1125451896 739476.0017457725 488640.77040569304 780235.9318401134 0.9895781358503816 1.0209473830421452 0.5726026704590363 0.606496620267601 1.333498968785412 1.3635849681671848 0.9105234500924909 0.9477594809069965 0.626273093131304 1.0 19.573550914088536 VWS(ph)PLVTEEGK ddPTM_KYSE-520_SHP099_60min_R1 14 VWSPLVTEEGK 11 0 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 VWS(1)PLVTEEGK;VWS(0.997)PLVT(0.003)EEGK;VWS(1)PLVTEEGK;VWS(1)PLVTEEGK;VWS(1)PLVTEEGK;VWS(1)PLVTEEGK;VWS(1)PLVTEEGK;VWS(1)PLVTEEGK;VWS(1)PLVTEEGK;VWS(1)PLVTEEGK;VWS(1)PLVTEEGK;VWS(0.975)PLVT(0.025)EEGK;VWS(1)PLVTEEGK;VWS(1)PLVTEEGK 246.26 1.9990000000000002e-14 42725940000.0 17068090.0 15451810.0 12893270.0 12307780.0 12947990.0 14987740.0 14011730.0 16730560.0 17995110.0 15792120.0 True False 16121289.023306124 14709481.853960339 13724390.81416139 13477507.71073102 13966923.149014495 14894195.955240129 15428172.409706801 16672525.592302065 14727651.643807381 15652214.102883449 1.0299685985215512 0.9397700387481002 0.8768338283612594 0.8610607816978555 0.8923289099681757 0.9515711871393532 0.985686261911318 1.0651864000014322 0.9409308834520898 1.0 23.89986341397737 -6.662135328916046 2.8651781709733886 1.0050077590701898 0.9158735893408069 0.3320229659200784 0.051708192425294314 0.3016245701063547 4.997916217648909 0.023439493743676567 0.01698249838071944 2.1770312898863067e-07 6.662135328916046 -0.08913416972938293 VWS(ph)PLVTEEGKR ddPTM_KYSE-520_SHP099_60min_R1 15 VWSPLVTEEGKR 12 1 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 1 VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR;VWS(0.992)PLVT(0.008)EEGKR;VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR;VWS(1)PLVTEEGKR;VWS(0.986)PLVT(0.014)EEGKR;VWS(1)PLVTEEGKR 247.93 8.9362e-16 118100860000.0 21682340.0 19825740.0 17647260.0 18052950.0 19515290.0 18939540.0 19351690.0 21037690.0 23561450.0 19752900.0 True False 20479577.377526794 18873281.691357553 18784830.61621432 19768696.940182652 21051032.296188924 18821331.305594344 21307947.67949417 20964715.16362377 19283284.6158198 19577904.673523672 1.046055628477061 0.9640092750518383 0.959491372006634 1.0097452853020068 1.0752443965394034 0.9613557538181047 1.0883671176676089 1.0708354909897768 0.9849513999267602 1.0 24.222723032887842 -5.523856553894468 24.998557719007714 1.033991389649356 0.9868262263283982 0.13905888342477446 0.04430374537068938 54.07629495906005 1382450.0453950283 0.012815140036784118 0.016682776269611697 2.9932531354747037e-06 5.523856553894468 -0.04716516332095777 VWSPLVTEEGKR ddPTM_KYSE-520_SHP099_60min_R1 2 VWSPLVTEEGKR 12 1 O00151 O00151 PDLIM1 PDZ and LIM domain protein 1 0 ; 194.29 1.5799e-07 2456800000.0 1052050.0 850720.0 647980.0 693200.0 1081800.0 1009650.0 689110.0 820850.0 799710.0 735080.0 False True 993690.6892903193 809850.1342432458 689749.8276046572 759081.5195818199 1166931.5053999808 1003348.3998393484 758771.9638654934 818002.6629378296 654502.8230485497 728567.7630835864 1.3638960432240759 1.1115646001349833 0.9467202126612954 1.0418818372763121 1.601678751830943 1.3771517910602877 1.041456954743744 1.1227544016986415 0.8983417277185521 1.0 19.474703636044616 -6.883011702180798 8.689640415890585 1.0228112039325357 1.2284582335397212 0.26543116887422935 0.1826595694028154 0.45484360259394174 32.555930332195395 0.08546264504422955 0.05757398612411844 1.309146647218121e-07 6.883011702180798 0.2056470296071855 VY(ph)ENVGLMQQQK ddPTM_KYSE-520_SHP099_60min_R1 2 VYENVGLMQQQK 12 0 Q06124;Q06124-1 Q06124 PTPN11 Tyrosine-protein phosphatase non-receptor type 11 1 VY(1)ENVGLMQQQK;VY(1)ENVGLMQQQK 183.03 1.5352000000000001e-07 594970000.0 963100.0 936250.0 943000.0 981320.0 1156690.0 1350280.0 1175560.0 1571950.0 1630030.0 1534280.0 True False 909674.9231077475 891271.1446600984 1003787.2888533467 1074584.3577553837 1247714.9223341679 1341852.4016590668 1294397.0771599866 1566497.2723458877 1334057.6417124069 1520687.472851779 0.5981997874959895 0.5860975121920862 0.6600878265742021 0.7066437890358838 0.8204939835496247 0.8823985372501696 0.8511920432490806 1.030124401175082 0.8772727240335707 1.0 20.53629225447363 -5.762996250918899 0.6343333849149302 0.9725284411395972 0.5487363490485093 0.9078774097861952 0.045376680542958736 0.23590546529798637 0.20051582960301217 0.029122295093043152 0.055556319699809564 1.7258527904851679e-06 5.762996250918899 -0.4237920920910879 VYEDSGIPLPAES(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 13 VYEDSGIPLPAESPK 15 0 F8W038;H0YIS7;Q8IXM2;Q8IXM2-3;F8W1H0;Q8IXM2-2 F8W038;Q8IXM2-2 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 1 VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK;VYEDSGIPLPAES(1)PK 300.56 1.4288e-33 27289170000.0 31266680.0 33669200.0 24369900.0 21304040.0 23367950.0 30939210.0 26625630.0 30469600.0 33674790.0 31665570.0 True False 29532254.9318187 32051681.093500495 25940822.747218654 23328769.556306824 25206874.71955212 30746106.914072752 29317208.52150743 30363908.069258083 27560297.008374374 31385037.685240693 0.9409660497462684 1.0212408031797044 0.8265347012604587 0.743308636117316 0.8031494170040792 0.9796421856307533 0.9341141729867767 0.96746444512116 0.8781349025218802 1.0 24.90357360543386 -6.276077019795171 24.7281420758785 0.9487278595338231 0.8664823836571053 0.23193409458486214 0.07707733620707101 1293.0925388161281 2184482.652513238 0.0305602539975617 0.027071711889899985 5.29569519251759e-07 6.276077019795171 -0.08224547587671782 VYEDSGIPLPAES(ph)PKK ddPTM_KYSE-520_SHP099_60min_R1 1 VYEDSGIPLPAESPKK 16 1 F8W038;H0YIS7;Q8IXM2;Q8IXM2-3;F8W1H0;Q8IXM2-2 F8W038;Q8IXM2-2 C17orf49;RNASEK-C17orf49;BAP18 Chromatin complexes subunit BAP18 1 VYEDSGIPLPAES(1)PKK 128.14 4.8436e-05 411810000.0 854860.0 900120.0 594330.0 583940.0 621040.0 852570.0 666630.0 801360.0 960470.0 793940.0 True False 807439.2116788384 856876.8840923356 632641.4627616227 639437.4820320379 669912.3147657642 847248.7943852167 734019.4660818349 798580.2691988301 786072.8594783625 786906.3092759742 1.0260931983399095 1.0889185586537498 0.8039603384851632 0.8125967151291225 0.8513241117384671 1.0766831888344663 0.9327914358155293 1.0148352602911483 0.9989408525668341 1.0 19.585832350081578 -6.256286244248413 24.992597365548903 1.001086181345039 0.9141196902889528 0.19424077285763908 0.08947172693477103 865.61979242698 4198242.106559958 0.03330088820944384 0.032381865422264025 5.542602786282419e-07 6.256286244248413 -0.08696649105608611 VYEDWDCFK ddPTM_KYSE-520_SHP099_60min_R1 1 VYEDWDCFK 9 0 Q9BTE3;Q9BTE3-2;Q9BTE3-3 Q9BTE3 MCMBP Mini-chromosome maintenance complex-binding protein 0 135.79 0.0036339 36284000.0 130870.0 117080.0 75488.0 81563.0 137630.0 128560.0 107130.0 104720.0 111400.0 105680.0 False True 123610.38021712274 111455.30105933704 80354.07726507047 89314.72299718978 148460.6979924194 127757.60935308934 117959.74588804423 104356.75076183172 91172.56816547064 104743.75741779576 1.1801216918739406 1.0640758342740242 0.7671490812054683 0.8526973368058246 1.417370367956613 1.2197157377455659 1.1261744737448487 0.9963052055272338 0.8704343859062345 1.0 16.676504738306452 -7.485196965468119 5.109889022229973 0.933331820860142 1.083947104981301 0.11618037592675734 0.1741763049640202 0.47647404759697987 31.60855299422837 0.11860021732583546 0.05121623564510257 3.2719226979522727e-08 7.485196965468119 0.150615284121159 VYEFLDKLDVVR ddPTM_KYSE-520_SHP099_60min_R1 2 VYEFLDKLDVVR 12 1 O43242;O43242-2;H0YGV8 O43242 PSMD3 26S proteasome non-ATPase regulatory subunit 3 0 ; 117.07 0.00015869 138983000.0 700140.0 530320.0 345740.0 380880.0 626650.0 471930.0 327990.0 337240.0 402290.0 276230.0 False True 661301.8385055123 504842.63117345097 368026.9536035594 417078.72068425274 675963.78984923 468984.50981645467 361146.43007392605 336070.19315240777 329244.2769056297 273782.81710368826 2.4154249178284304 1.8439529423873766 1.344229552083901 1.52339261132774 2.468978137489271 1.7129800722257846 1.3190982322939246 1.2275065203421067 1.2025746553003611 1.0 18.062672378822274 -6.764836014431993 3.253026418663906 1.1828577692885283 1.8790426330050392 0.5243131047771235 0.3306876347659283 0.22980639480621892 5.0535790748273115 0.15457134264198924 0.10636509880749537 1.7185571759104758e-07 6.764836014431993 0.6961848637165109 VYEGERPLTK ddPTM_KYSE-520_SHP099_60min_R1 4 VYEGERPLTK 10 1 P11021 P11021 HSPA5 78 kDa glucose-regulated protein 0 ;;; 151.07 0.00016274 8389550000.0 10864700.0 10022000.0 6474450.0 6841600.0 11322600.0 10521500.0 8006700.0 9364100.0 9275100.0 8506200.0 False True 10262013.432757517 9540528.076671317 6891803.4064862635 7491823.606997962 12213624.203218525 10455831.41574773 8816095.373861706 9331618.122697374 7590975.646243773 8430841.685723452 1.2171991617556903 1.1316222546115386 0.8174514079841694 0.8886210756020249 1.4486838513289522 1.2401883234806008 1.0456957564261504 1.1068430022235232 0.9003817091119284 1.0 23.007245237882174 -7.748952631267281 23.531542244047145 0.9501909088163153 1.1087059598380327 0.12704519356706911 0.1695201331171408 228.5299874068522 430681.40166328824 0.12698561679700068 0.04713411797064141 1.782573183061191e-08 7.748952631267281 0.15851505102171737 VYFQS(ph)PPGAAGEGPGGADDEGPVRR ddPTM_KYSE-520_SHP099_60min_R1 5 VYFQSPPGAAGEGPGGADDEGPVRR 25 1 Q96C90 Q96C90 PPP1R14B Protein phosphatase 1 regulatory subunit 14B 1 VY(0.005)FQS(0.995)PPGAAGEGPGGADDEGPVRR;VY(0.018)FQS(0.982)PPGAAGEGPGGADDEGPVRR;VY(0.03)FQS(0.97)PPGAAGEGPGGADDEGPVRR;VYFQS(1)PPGAAGEGPGGADDEGPVRR;VYFQS(1)PPGAAGEGPGGADDEGPVRR 107.15 0.0006123999999999999 5687300000.0 2033556.0 2183459.0 2190348.0 1709900.0 1828150.0 1721010.0 1622896.0 1806397.0 2503760.0 1885417.0 True False 1920750.594886616 2078562.3522012234 2331541.33676071 1872408.381899821 1972015.0042493732 1710268.538213755 1786954.1656186269 1800131.0304232293 2049140.2986533102 1868713.672212229 1.0278463862325062 1.112295791008245 1.2476717923300547 1.0019771406088223 1.055279379379107 0.9152116579684982 0.9562482429441352 0.9632995451315931 1.096551242238993 1.0 20.83361410292057 -5.417053292423331 10.871562406238914 0.993248380711291 1.1275614541596437 0.43011711396868413 0.06893777474810674 0.48700633524189735 47.398636661186394 0.019857293309765982 0.02945611793830765 3.8277776964472575e-06 5.417053292423331 0.13431307344835275 VYLDLT(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 12 VYLDLTPVK 9 0 Q8N4X5-2;Q8N4X5;Q8N4X5-4;Q8N4X5-3 Q8N4X5-2 AFAP1L2 Actin filament-associated protein 1-like 2 1 VYLDLT(1)PVK;VYLDLT(1)PVK;VYLDLT(1)PVK;VYLDLT(1)PVK;VYLDLT(1)PVK;VYLDLT(1)PVK;VYLDLT(1)PVK;VYLDLT(1)PVK;VYLDLT(1)PVK;VYLDLT(1)PVK;VYLDLT(1)PVK;VYLDLT(1)PVK 180.66 0.00010369 8238434000.0 21477860.0 22019580.0 16304110.0 15022190.0 16189970.0 20952270.0 15757170.0 19979240.0 21809620.0 22088610.0 True False 20286440.29074758 20961726.324736603 17355099.018098354 16449894.421013871 17464028.530671567 20821499.11108005 17350058.51875961 19909936.67962966 17849542.783779263 21892922.100078527 0.9266209507352522 0.957465898289631 0.79272647747813 0.7513795712521568 0.7977020358835025 0.9510607590845703 0.7924962432811733 0.9094234469302865 0.8153111175467637 1.0 24.383961191500614 -10.173992920166835 3.7535870938252867 1.000108780511639 0.8539651157004841 0.26998615979471074 0.0715587351033873 51003854.2991958 113154032.40315774 75778.144024841 0.018675471699973765 6.698955299097157e-11 10.173992920166835 -0.14614366481115504 VYNWDVK ddPTM_KYSE-520_SHP099_60min_R1 2 VYNWDVK 7 0 P61758-2;P61758 P61758-2 VBP1 Prefoldin subunit 3 0 ; 109.86 0.022777000000000002 643470000.0 939860.0 860360.0 525810.0 560140.0 920520.0 851640.0 608060.0 694760.0 747620.0 784320.0 False True 887724.092235541 819027.0141733111 559704.5539257459 613375.5371877684 992959.6869576545 846324.5988601827 669528.6388937202 692350.0397182025 611871.053966509 777371.5349917259 1.141956004659972 1.0535850327759024 0.7199962035292471 0.7890378147101783 1.2773296194440966 1.0887002684876939 0.8612723887566149 0.8906295234048822 0.7871024682850286 1.0 19.568244755926465 -4.533598838785645 24.991989722164703 0.9307585134189524 1.1198633659705588 0.17150860321147066 0.15553804102226837 339.64794506095296 791828.5982790968 0.043025826703136226 0.11406676452551534 2.926854688177358e-05 4.533598838785645 0.18910485255160636 VYREELK ddPTM_KYSE-520_SHP099_60min_R1 2 VYREELK 7 1 P04083;Q5T3N1 P04083 ANXA1 Annexin A1;Annexin 0 ; 107.9 0.0037314999999999996 1897250000.0 2147900.0 2323500.0 1376550.0 1485840.0 2718000.0 3170900.0 2346700.0 2651100.0 2775300.0 2684000.0 False True 2028751.7052675057 2211875.5723553947 1465284.6155578727 1627053.7868659154 2931891.136695456 3151109.2369143674 2583927.33758493 2641903.9528713925 2271375.4796196655 2660221.8481204016 0.7626250068959228 0.831462824770878 0.5508129393769094 0.6116233456301856 1.1021227942951466 1.1845287411427003 0.9713202451181363 0.9931141475054226 0.8538293455579736 1.0 21.343115133034534 -5.761320393722623 24.99999999373033 1.023185466608145 0.6894176945320777 0.6905369790622511 0.10764552155647264 1.9776496778417747 415435.05749341124 0.0356243037977033 0.043103902006127306 1.7325253836222022e-06 5.761320393722623 -0.33376777207606734 VYS(ph)PYNHR ddPTM_KYSE-520_SHP099_60min_R1 6 VYSPYNHR 8 0 Q9NS56-2;Q9NS56 Q9NS56-2 TOPORS E3 ubiquitin-protein ligase Topors 1 VYS(1)PYNHR;VYS(1)PYNHR;VYS(1)PYNHR;VYS(1)PYNHR;VYS(1)PYNHR;VYS(1)PYNHR 131.45 0.00061688 7595940000.0 4400240.0 3822580.0 3723930.0 3633960.0 3759270.0 4025370.0 3509790.0 3725500.0 4328540.0 3599610.0 True False 4156149.9155390337 3638937.5189904417 3963980.486298671 3979330.465810085 4055103.16167959 4000246.1726948093 3864593.8254494467 3712577.1100382362 3542586.249613699 3567720.255854203 1.164931557825838 1.0199615603323662 1.1110681897758807 1.1153706514070096 1.1366090586910926 1.1212331365192894 1.0832109998277217 1.0406020774600644 0.9929551633990188 1.0 21.7665710676222 -7.373507963664777 1.9484275490956422 0.9962254162466045 1.1083729992859876 0.6317764424395214 0.03510020868835706 0.23744155027130584 1.644887724441453 0.027783992600354437 0.010160703447315976 4.231477503784898e-08 7.373507963664777 0.1121475830393831 VYSS(ph)SEFLAVQPTPTFAER ddPTM_KYSE-520_SHP099_60min_R1 6 VYSSSEFLAVQPTPTFAER 19 0 O60307;V9GYV0 O60307 MAST3 Microtubule-associated serine/threonine-protein kinase 3 1 VYS(0.003)S(0.995)S(0.001)EFLAVQPTPTFAER;VYS(0.023)S(0.976)S(0.001)EFLAVQPTPTFAER;VYS(0.003)S(0.992)S(0.005)EFLAVQPTPTFAER;VYSS(0.999)S(0.001)EFLAVQPTPTFAER;VYS(0.225)S(0.751)S(0.024)EFLAVQPTPTFAER;VYSS(0.93)S(0.07)EFLAVQPTPTFAER 283.49 1.033e-35 977529000.0 725297.0 858199.0 690400.0 587819.0 641988.0 727146.0 604004.0 722134.0 884017.0 730530.0 True False 685063.329566276 816969.8318570384 734904.2886790576 643685.1410257728 692508.803187949 722607.6120928862 665062.618830975 719629.085701342 723501.7970550708 724058.0725437397 0.946144177578922 1.1283208665665225 1.0149797599758998 0.8889965673117861 0.9564271561189108 0.9979967622683112 0.9185211021741618 0.9938831054989306 0.9992317253135309 1.0 19.465745886677585 -5.00909304055337 24.97824856407582 0.9629220629015391 1.0458369697528174 0.2356300543370361 0.05394704789807314 502.9085283662712 1381484.0442694298 0.013715847531349261 0.02637292480134241 9.79280168031439e-06 5.00909304055337 0.08291490685127823 VYT(ph)HEVVTLWYR ddPTM_KYSE-520_SHP099_60min_R1 5 VYTHEVVTLWYR 12 0 A0A087WZZ9;P06493;E5RIU6 A0A087WZZ9 CDK1 Cyclin-dependent kinase 1 1 VY(0.387)T(0.613)HEVVTLWYR;VYT(1)HEVVTLWYR;VYT(1)HEVVTLWYR;VYT(1)HEVVTLWYR;VYT(0.989)HEVVT(0.011)LWYR 188.48 4.3706e-07 1478470000.0 863415.0 969045.0 902339.0 839145.0 846399.0 897458.0 810831.0 817956.0 948039.0 796216.0 True False 815519.6487748703 922490.6236337998 960505.2157334471 918897.088501856 913005.7859484539 891856.6317268575 892797.7104279753 815118.7015483646 775899.0157183531 789162.1456866743 1.0333993504785528 1.168949408782288 1.2171202343945198 1.1643958006909916 1.1569305382153365 1.1301310340358832 1.1313235376376607 1.0328912835005597 0.983193403230485 1.0 19.58996222935801 -7.318442568682204 2.1190495612668174 0.9898682243156118 1.151097960671115 0.6785520937164065 0.04402557033854184 0.1975377610285399 1.6554022182483026 0.033418327366181826 0.013099461869195335 4.8034959770897195e-08 7.318442568682204 0.16122973635550308 VYT(ph)PVASR ddPTM_KYSE-520_SHP099_60min_R1 1 VYTPVASR 8 0 Q9NS91;F8WE49 Q9NS91 RAD18 E3 ubiquitin-protein ligase RAD18 1 VYT(1)PVASR 119.22 0.0045455 176780000.0 130950.0 154540.0 127260.0 105030.0 126940.0 157860.0 114080.0 120660.0 164100.0 141510.0 True False 123685.94245764679 147115.66643073078 135463.38322319943 115012.01962157917 136929.45581019917 156874.73718480603 125612.31971350791 120241.4586222558 134303.57662436034 140256.33149311418 0.8818563920853661 1.0489057061780727 0.9658272234922239 0.820013031833972 0.9762800320848379 1.1184859572097658 0.8955910822441181 0.8572979012227979 0.9575580310323025 1.0 17.09770637331038 -8.027537422160504 23.330570137511028 1.0000000075068607 0.94789785361958 0.03512633001452159 0.08490597726525576 5848.216054103099 4954791.856989157 0.08517565084639986 0.02199225848563241 9.385611595228836e-09 8.027537422160504 -0.05210215388728068 VYT(ph)YIQSR ddPTM_KYSE-520_SHP099_60min_R1 1 VYTYIQSR 8 0 A0A0A0MTH5;Q9NR20-5;Q9NR20-2;Q9NR20;Q92630-2;Q92630;Q9NR20-3;Q9NR20-4 A0A0A0MTH5 DYRK4;DYRK2 Dual specificity tyrosine-phosphorylation-regulated kinase 4;Dual specificity tyrosine-phosphorylation-regulated kinase 2 1 VY(0.005)T(0.755)Y(0.239)IQSR 117.4 0.0088152 1588600000.0 2601600.0 2472000.0 2713100.0 1580300.0 2996800.0 1872100.0 2225600.0 2565100.0 2968000.0 2123200.0 True False 2457284.0618389794 2353241.409452356 2887990.7671134816 1730491.2368654807 3232631.1105404547 1860415.529479766 2450585.367762827 2556202.2667988436 2429086.017191355 2104390.099824602 1.1676941751644767 1.1182534120686538 1.3723647375808279 0.8223243575465 1.5361368174132213 0.8840640001275568 1.1645109753971377 1.2146998158810478 1.15429454709648 1.0 21.00497073731718 VYTDVNTHRPR ddPTM_KYSE-520_SHP099_60min_R1 4 VYTDVNTHRPR 11 1 P68400;E7EU96;A0A2R8YD58;A0A2R8YFU2;A0A2R8Y5A0;A0A2R8YDP2;Q8NEV1;A0A2R8YF43;A0A2R8Y4H0;A0A2R8Y4D6;A0A2R8Y7T1;A0A2R8YEW1;V9GYA2;A0A2R8YDY7;A0A2R8YCK2;A0A2R8YF47;V9GY80;A0A2R8YEL7;A0A2R8Y797;A0A2R8Y3W6;A0A2R8YCC9 P68400 CSNK2A1;CSNK2A3 Casein kinase II subunit alpha;Casein kinase II subunit alpha 3 0 ;;; 162.36 1.9465e-05 2020830000.0 1291210.0 1088410.0 892317.0 809045.0 1284270.0 1028463.0 909175.0 962751.0 965463.0 832248.0 False True 1219584.00733668 1036121.1498632836 949837.1815776804 885936.3935517522 1385334.742503267 1022043.980928021 1001083.2816929222 959411.4414887717 790159.2565416505 824874.9301991453 1.4785077866801482 1.25609484775242 1.1514923618158284 1.07402511716275 1.6794482312231416 1.2390290255048413 1.213618265075938 1.1630992849511694 0.9579140153415577 1.0 19.65381586499528 -7.440364103501907 1.5925719239128822 0.975388880465293 1.3044468146116313 0.3871274873371321 0.1615686750377732 0.45461255186143734 2.0383524752618096 0.1448297961754395 0.0496053511172237 3.6277378521069486e-08 7.440364103501907 0.3290579341463382 VYTHEVVT(ph)LWYR ddPTM_KYSE-520_SHP099_60min_R1 1 VYTHEVVTLWYR 12 0 A0A087WZZ9;P06493;E5RIU6 A0A087WZZ9 CDK1 Cyclin-dependent kinase 1 1 VYT(0.144)HEVVT(0.856)LWYR 263.29 6.5372e-21 777130000.0 481960.0 410090.0 413990.0 411510.0 378620.0 386130.0 419480.0 397250.0 425000.0 374970.0 True False 455224.71803655993 390388.66084236105 440676.45780742017 450619.78667500673 408415.23994688503 383720.0194423491 461885.1321302793 395872.03246884665 347830.713378142 371648.05752224533 1.2248811982807473 1.0504256727320416 1.1857359372342289 1.2124906280400363 1.0989301078815379 1.0324822413995294 1.2428024922547396 1.0651798777265273 0.9359142509639574 1.0 18.50357754199745 -7.543873077185635 5.46632214765101 0.9743363638742554 1.1441384852550516 0.5224467434784281 0.06941828445525096 0.14063871764340258 12.77764596707428 0.046329714275622505 0.017647199952061092 2.858425797915424e-08 7.543873077185635 0.1698021213807962 VYTY(ph)IQSR ddPTM_KYSE-520_SHP099_60min_R1 1 VYTYIQSR 8 0 A0A0A0MTH5;Q9NR20-5;Q9NR20-2;Q9NR20;Q92630-2;Q92630;Q9NR20-3;Q9NR20-4 A0A0A0MTH5 DYRK4;DYRK2 Dual specificity tyrosine-phosphorylation-regulated kinase 4;Dual specificity tyrosine-phosphorylation-regulated kinase 2 1 VYT(0.044)Y(0.956)IQSR 153.04 0.00022029 1175500000.0 1891100.0 1766100.0 1743400.0 1220300.0 2012500.0 1551600.0 1554700.0 1663100.0 2117000.0 1635700.0 True False 1786196.9131856116 1681253.905029854 1855782.3535386254 1336276.9451034274 2170872.3004413587 1541915.8888632029 1711864.2484098051 1657331.0942704598 1732606.1652271221 1621208.9705553437 1.1017684614548804 1.0370371343639568 1.1446904052738671 0.824247194145297 1.3390453296700724 0.9510901536246873 1.0559183174414633 1.022280979424104 1.0687124218376485 1.0 20.628638632636704 -13.999999980173959 0.1057935790950929 0.8011951051584346 1.09707769628412 0.02628360184896561 0.12464670811500314 876.0597069829553 6.2130438578586835 37.56345143454279 1.6809748833105114 1.000000045651148e-14 13.999999980173959 0.2958825911256854 VYYS(ph)PPVAR ddPTM_KYSE-520_SHP099_60min_R1 10 VYYSPPVAR 9 0 O94964-2;H0YDM2;O94964-3;O94964 O94964-2 SOGA1 Protein SOGA1;N-terminal form;C-terminal 80 kDa form 1 VY(0.012)Y(0.012)S(0.976)PPVAR;VYYS(1)PPVAR;VYYS(1)PPVAR;VYYS(1)PPVAR;VYYS(1)PPVAR;VYYS(1)PPVAR;VYYS(1)PPVAR;VYYS(1)PPVAR;VYY(0.012)S(0.988)PPVAR;VYYS(1)PPVAR 125.68 0.00066089 18504300000.0 13962300.0 13097980.0 12088940.0 10997430.0 11317960.0 11495990.0 10827400.0 11665400.0 14802060.0 11540200.0 True False 13187783.385844992 12468733.380331196 12868212.415387878 12042622.440702092 12208619.061616525 11424239.262189042 11921939.257240832 11624935.45012482 12114379.033567196 11437962.806139728 1.152983587144206 1.0901183708726667 1.1250440863892663 1.0528642770404701 1.0673770555595024 0.998800175854452 1.042313168813708 1.0163466735426634 1.0591378236572317 1.0 23.447326783530787 -5.334150078287388 0.9652700270389326 1.0249947972324414 1.136647999526321 0.7458761878765444 0.024412130076311815 0.31990595965676494 0.5670813986649538 0.009429735946047976 0.026056527247167335 4.632867949670599e-06 5.334150078287388 0.11165320229387965 VYYTAGYNS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 2 VYYTAGYNSPVK 12 0 Q9Y5Z4-2;Q9Y5Z4 Q9Y5Z4-2 HEBP2 Heme-binding protein 2 1 VYYTAGYNS(1)PVK;VYYTAGYNS(1)PVK 249.3 1.1616e-15 981010000.0 916910.0 958080.0 847390.0 702920.0 714460.0 882560.0 859710.0 859680.0 975350.0 712540.0 True False 866047.1744852307 912052.3986926017 902014.1152719388 769725.3054593952 770683.9372786748 877051.6156709895 946617.8767610448 856697.9707308214 798251.0265726368 706227.4499477319 1.2263006408903068 1.2914428613049562 1.277228908814996 1.0899113387852069 1.091268736914309 1.2418826480560905 1.3403866938775946 1.2130624075773688 1.130303030038999 1.0 19.429773371906208 -8.037455711838685 2.7362735471375124 1.000833274761374 1.2214784714874187 0.4548374472759902 0.07547312307437061 0.29450617746625607 5.294921976472991 0.08117547505285229 0.02188410638330902 9.173694814460747e-09 8.037455711838685 0.22064519672604477 WAAHGAS(ph)PEDFSLTLGAR ddPTM_KYSE-520_SHP099_60min_R1 4 WAAHGASPEDFSLTLGAR 18 0 Q86UU1-3;Q86UU1-2;Q86UU1 Q86UU1-3 PHLDB1 Pleckstrin homology-like domain family B member 1 1 WAAHGAS(1)PEDFSLTLGAR;WAAHGAS(1)PEDFSLTLGAR;WAAHGAS(1)PEDFSLTLGAR;WAAHGAS(1)PEDFSLTLGAR 299.69 1.7753e-38 2146680000.0 997810.0 1061020.0 995880.0 1040930.0 980030.0 902140.0 868350.0 949460.0 1210670.0 861060.0 True False 942459.4902150789 1010047.0065765111 1060076.0182643377 1139859.6742329842 1057152.7853920707 896509.4096281581 956131.2922793173 946166.5448656294 990842.8465070935 853431.6782945425 1.104317444717362 1.1835124383886726 1.2421334305081615 1.3356191283065868 1.2387081617413531 1.0504758991600829 1.1203372415118278 1.1086611487827636 1.1610101566503215 1.0 19.702916136968135 -6.251959343421266 24.690030534763086 1.0969032327324786 1.226340940814019 0.48940183143510785 0.06738762840348289 545.0268197654239 1419480.9418468126 0.0236827552574169 0.023365852260896262 5.598100057857896e-07 6.251959343421266 0.12943770808154031 WAAS(ph)LENLLEDPEGVKR ddPTM_KYSE-520_SHP099_60min_R1 1 WAASLENLLEDPEGVKR 17 1 O43665;O43665-2;O43665-1 O43665 RGS10 Regulator of G-protein signaling 10 1 WAAS(1)LENLLEDPEGVKR 103.9 0.00040132 38830000.0 39331.0 42767.0 38487.0 31705.0 38753.0 38048.0 32059.0 41348.0 41908.0 32149.0 True False 37149.23102559533 40712.40912542424 40967.93360137727 34718.23366754417 41802.640625592016 37810.52831881103 35299.83658568856 41204.57343869576 34298.56361470863 31864.18487154352 1.1658616460881648 1.2776855673399847 1.285704742378767 1.0895691764125268 1.311900517590961 1.18661526950209 1.1078217355314577 1.2931312570777145 1.07639858835175 1.0 14.959648134703293 -8.515030241827557 0.5496808208942784 0.9886195346384646 1.2251065711268043 0.4085409568577574 0.07980269990896535 1.8515034224362954 0.9955999953958561 0.11448305304240934 0.03639900661302482 3.054708393080227e-09 8.515030241827557 0.23648703648833969 WADPQISESNFS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 WADPQISESNFSPK 14 0 D6RAW2;Q9BW91-2;Q9BW91 D6RAW2 NUDT9 ADP-ribose pyrophosphatase, mitochondrial 1 WADPQISES(0.001)NFS(0.999)PK;WADPQISESNFS(1)PK 181.72 2.8394000000000003e-09 477590000.0 564320.0 487400.0 424140.0 422830.0 504500.0 491360.0 452840.0 458039.0 583790.0 438250.0 True False 533016.0446559705 463984.5723976852 451480.7430479941 463015.63607152493 544201.2797876595 488293.23997926293 498617.48649250396 456450.1696161061 477788.4521482951 434367.4459533408 1.2271086372186981 1.0681844984477171 1.0393982036501226 1.0659538148751173 1.2528592666360105 1.1241478718727802 1.1479163347477583 1.0508388090969814 1.0999637670812434 1.0 18.72855645759389 -8.058807840155282 1.0511819717197002 1.0032041082427674 1.1262100476325267 0.24739952372298424 0.06724255515939893 0.9397739060855446 2.3054290085372386 0.06681180520732258 0.021838498032409767 8.733577126010105e-09 8.058807840155282 0.12300593938975934 WAESVPEEAPGFSNT(ph)SLIILHQLEDK ddPTM_KYSE-520_SHP099_60min_R1 1 WAESVPEEAPGFSNTSLIILHQLEDK 26 0 Q8WUM0 Q8WUM0 NUP133 Nuclear pore complex protein Nup133 1 WAESVPEEAPGFS(0.093)NT(0.453)S(0.453)LIILHQLEDK 66.083 0.038681 33687000.0 44981.0 42872.0 60926.0 26368.0 31824.0 39831.0 27482.0 40864.0 57622.0 47103.0 True False 42485.814262599546 40812.36476781607 64853.387445046654 28874.006792171727 34328.36774620906 39582.39995444074 30260.148758473206 40722.25232172929 47159.29733241246 46685.70406557949 0.9100390604138613 0.8741940511486529 1.3891487499887971 0.6184764130709555 0.7353079156306167 0.8478484098438201 0.6481673429614925 0.8722638575724738 1.0101442888419914 1.0 15.510693220037297 -5.291379552999757 24.999658803799264 0.8041755320180871 1.039434280789827 0.2700066383369497 0.17810866778998405 901.0894861031999 752396.1192524051 0.05017086425348491 0.07442511006004833 5.112348449773853e-06 5.291379552999757 0.2352587487717398 WAEYHADIYDK ddPTM_KYSE-520_SHP099_60min_R1 3 WAEYHADIYDK 11 0 Q9NRX4;Q9NRX4-2 Q9NRX4 PHPT1 14 kDa phosphohistidine phosphatase 0 ;; 164.9 2.9497e-05 5663880000.0 8551200.0 8031500.0 4945360.0 4802940.0 7776600.0 8436100.0 6352900.0 6501100.0 6036200.0 6550100.0 False True 8076847.8896054095 7645654.6844727155 5264145.818455772 5259409.973543438 8388574.177198641 8383447.170687584 6995113.130329099 6478549.201468151 4940178.240219153 6492071.209900684 1.2441095651088783 1.1776911308078026 0.8108576828959803 0.8101282015395357 1.2921260266532058 1.2913362930927916 1.0774855826690957 0.9979171503214704 0.7609556458168808 1.0 22.630247393856877 -7.506439476010183 4.142454338712672 0.8770549607629899 1.0940034819242068 0.20471378384349082 0.17268349687094306 0.3667374217349633 14.672208519195536 0.12781566957084864 0.05021983691413511 3.115735079659073e-08 7.506439476010183 0.21694852116121688 WAHDKFS(ph)GEEGEIEDDES(ph)GTENR ddPTM_KYSE-520_SHP099_60min_R1 14 WAHDKFSGEEGEIEDDESGTENR 23 1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 WAHDKFS(1)GEEGEIEDDES(0.836)GT(0.164)ENR;WAHDKFS(1)GEEGEIEDDES(0.95)GT(0.05)ENR;WAHDKFS(1)GEEGEIEDDES(0.855)GT(0.145)ENR;WAHDKFS(1)GEEGEIEDDES(0.76)GT(0.24)ENR;WAHDKFS(1)GEEGEIEDDES(1)GTENR;WAHDKFS(1)GEEGEIEDDES(0.877)GT(0.123)ENR;WAHDKFS(1)GEEGEIEDDES(0.965)GT(0.035)ENR;WAHDKFS(1)GEEGEIEDDES(0.913)GT(0.087)ENR;WAHDKFS(1)GEEGEIEDDES(0.878)GT(0.122)ENR;WAHDKFS(1)GEEGEIEDDES(0.963)GT(0.037)ENR;WAHDKFS(1)GEEGEIEDDES(0.994)GT(0.006)ENR;WAHDKFS(1)GEEGEIEDDES(0.867)GT(0.133)ENR;WAHDKFS(1)GEEGEIEDDES(0.901)GT(0.099)ENR;WAHDKFS(1)GEEGEIEDDES(0.851)GT(0.149)ENR 293.99 3.0552e-48 40416970000.0 27515290.0 23946050.0 20449760.0 25612990.0 22427480.0 24713230.0 25928040.0 27817340.0 26112520.0 24430820.0 True False 25988962.013329264 22795645.814246178 21767984.2503729 28047240.868773744 24192395.08109443 24558985.56466279 28549099.31648508 27720848.140155975 21371144.61106115 24214381.94169035 1.0732862013951958 0.9414093603189801 0.8989692284028343 1.158288530193054 0.9990919916664044 1.0142313615025262 1.1790141654341202 1.1448092380350405 0.8825806358602963 1.0 24.529360843651677 -5.2507617604354335 24.985844764357957 1.061299773970886 0.9682403811189526 0.13641215589976563 0.09411365157250874 1326.9900194207419 3105178.48895934 0.02560750504401544 0.04381655138917725 5.61355832796855e-06 5.2507617604354335 -0.09305939285193343 WAHDKFS(ph)GEEGEIEDDES(ph)GTENREEK ddPTM_KYSE-520_SHP099_60min_R1 6 WAHDKFSGEEGEIEDDESGTENREEK 26 2 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 WAHDKFS(1)GEEGEIEDDES(0.993)GT(0.007)ENREEK;WAHDKFS(1)GEEGEIEDDES(0.99)GT(0.01)ENREEK;WAHDKFS(1)GEEGEIEDDES(0.814)GT(0.186)ENREEK;WAHDKFS(1)GEEGEIEDDES(0.974)GT(0.026)ENREEK;WAHDKFS(1)GEEGEIEDDES(0.969)GT(0.031)ENREEK;WAHDKFS(1)GEEGEIEDDES(0.732)GT(0.268)ENREEK 229.26 6.416900000000001e-22 8954960000.0 4906440.0 4554580.0 3979680.0 4774020.0 3915280.0 4527520.0 4206570.0 5068530.0 4805990.0 4031370.0 True False 4634269.992454344 4335771.140236038 4236216.540513139 5227741.4254385475 4223390.261104114 4499262.0682817325 4631811.1477669235 5050948.452433801 3933343.365148745 3995655.1981584034 1.159827303064158 1.0851214444715835 1.0602057310815034 1.308356493785553 1.0569956744642717 1.1260386207387068 1.1592119234667007 1.264110190179018 0.9844051025628092 1.0 21.93000066162127 -7.790877845511231 24.996508703150493 0.9922021377420331 1.1485177418295154 0.4059177209264081 0.07744264715404282 241.17048040482453 204774.1650784244 0.0736972665901898 0.019040621750378118 1.6185352208149773e-08 7.790877845511231 0.15631560408748224 WAHDKFS(ph)GEEGEIEDDES(ph)GTENREEKDNIQPTTE ddPTM_KYSE-520_SHP099_60min_R1 5 WAHDKFSGEEGEIEDDESGTENREEKDNIQPTTE 34 3 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 WAHDKFS(1)GEEGEIEDDES(0.97)GT(0.03)ENREEKDNIQPTTE;WAHDKFS(1)GEEGEIEDDES(0.971)GT(0.029)ENREEKDNIQPTTE;WAHDKFS(1)GEEGEIEDDES(0.965)GT(0.035)ENREEKDNIQPTTE;WAHDKFS(1)GEEGEIEDDES(0.997)GT(0.003)ENREEKDNIQPTTE;WAHDKFS(1)GEEGEIEDDES(0.858)GT(0.142)ENREEKDNIQPTTE 232.29 1.3708999999999999e-30 43704900000.0 8875640.0 9019350.0 8583030.0 7775000.0 7554930.0 7991640.0 6987010.0 7534710.0 11252550.0 6653000.0 True False 8383290.556050311 8586046.887679653 9136305.847133555 8513933.662361009 8149460.009328404 7941761.210411654 7693325.157446328 7508573.849624534 9209370.573701682 6594059.595955674 1.2713398224656665 1.3020881541540392 1.385535831786706 1.2911520647436747 1.2358790348705224 1.2043811698763784 1.1667054332000373 1.1386875930314246 1.3966162179289452 1.0 22.652735495216486 -5.882103954618584 2.168360572195502 1.189184829828348 1.3200730639276468 0.3006541397341759 0.09449438620514604 0.4090475711051695 3.929136203029682 0.0317517663378261 0.03760279262913581 1.3118858427250534e-06 5.882103954618584 0.13088823409929873 WAHDKFS(ph)GEEGEIEDDESGT(ph)ENREEKDNIQPTTE ddPTM_KYSE-520_SHP099_60min_R1 1 WAHDKFSGEEGEIEDDESGTENREEKDNIQPTTE 34 3 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 2 WAHDKFS(1)GEEGEIEDDES(0.196)GT(0.804)ENREEKDNIQPTTE 94.84899999999999 0.00075099 1750900000.0 580920.0 586320.0 553570.0 497680.0 484400.0 472640.0 435880.0 476360.0 713270.0 461380.0 True False 548695.2095646908 558152.3071157376 589254.007943316 544979.3575670525 522519.52414101566 469690.07844309433 479943.0041788552 474707.61834326 583758.1480734762 457292.53214820824 1.199877914006387 1.220558543770054 1.288571246014442 1.1917521482516251 1.1426373435104935 1.0271107560769615 1.0495316901945513 1.0380830321309678 1.2765529874961536 1.0 18.80275783372882 -5.829404429126125 2.5621839033487706 1.079399829673127 1.233963181055358 0.4616833124230939 0.0749222077112908 0.2522384868790477 3.3796488365824637 0.024773264147497396 0.029994924764630698 1.4811381587731922e-06 5.829404429126125 0.15456335138223087 WAHDKFS(ph)GEEGEIEDDESGTENR ddPTM_KYSE-520_SHP099_60min_R1 15 WAHDKFSGEEGEIEDDESGTENR 23 1 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR;WAHDKFS(1)GEEGEIEDDESGTENR 304.86 1.2575999999999998e-49 55375330000.0 19816200.0 18811530.0 15904800.0 18231200.0 18021340.0 18128510.0 18389310.0 18098710.0 20113350.0 16175330.0 True False 18716955.883384682 17907795.86211782 16930048.85657975 19963887.766589846 19439516.93060167 18015363.244660653 20248280.917170476 18035929.79928068 16461272.656292362 16032029.1604163 1.1674726696229802 1.1170012032121837 1.0560141007216164 1.2452502154799878 1.2125425132458336 1.1237107333325767 1.2629892769384592 1.1249935749750313 1.0267741214528152 1.0 23.934453701955956 -7.723227412926446 3.4480121839232707 1.0048677336134513 1.167247772118358 0.5233562969516504 0.0587095728929345 0.19216808594570045 4.398456112236077 0.05339811859031201 0.015867890245886102 1.8913529757384825e-08 7.723227412926446 0.1623800385049068 WAHDKFS(ph)GEEGEIEDDESGTENREEK ddPTM_KYSE-520_SHP099_60min_R1 3 WAHDKFSGEEGEIEDDESGTENREEK 26 2 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFS(0.997)GEEGEIEDDES(0.002)GT(0.001)ENREEK;WAHDKFS(1)GEEGEIEDDESGTENREEK;WAHDKFS(1)GEEGEIEDDESGTENREEK 168.95 1.9515000000000002e-10 4279000000.0 1416570.0 1550900.0 1328190.0 1418560.0 1280770.0 1267725.0 1144010.0 1269450.0 1803250.0 1147290.0 True False 1337990.0382377156 1476392.4360516388 1413807.2525791395 1553379.5158943827 1381559.312415542 1259812.6580362895 1259657.695261659 1265046.5742418575 1475825.2562332572 1137125.9031781137 1.1766419483526087 1.2983544143399783 1.2433163721165252 1.3660576296370492 1.2149572079523208 1.1078919709025032 1.1077556950739451 1.11249472965678 1.2978556306812856 1.0 20.11696056835178 -6.054280542831571 4.972522221979501 1.1326940291815097 1.2734124732444498 0.4171914547828953 0.08135429228149633 0.2128159101946737 11.308708134468482 0.026231037280166354 0.026893634377511622 8.825096381979135e-07 6.054280542831571 0.1407184440629401 WAHDKFS(ph)GEEGEIEDDESGTENREEKDNIQPTTE ddPTM_KYSE-520_SHP099_60min_R1 2 WAHDKFSGEEGEIEDDESGTENREEKDNIQPTTE 34 3 Q9Y2W1 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 1 WAHDKFS(1)GEEGEIEDDESGTENREEKDNIQPTTE;WAHDKFS(0.999)GEEGEIEDDESGTENREEKDNIQPTTE 143.39 1.7516999999999999e-06 1887360000.0 637610.0 717900.0 678580.0 636790.0 601010.0 587760.0 456480.0 588040.0 925800.0 534470.0 True False 602240.5022559778 683411.0064101309 722322.3525663884 697310.3301421057 648306.0677208743 584091.5718214981 502625.4532154809 586000.2264895674 757698.0575187852 529735.0116113675 1.136871245160973 1.2900997506872467 1.3635541105149944 1.3163380083581817 1.2238308843299466 1.102610850743633 0.9488243030917973 1.1062138874058 1.4303341121705198 1.0 19.01491133781791 -6.098291927299994 3.7116952733785458 1.1143921726059534 1.2829857322921439 0.2509254317871493 0.13031827019604098 0.3518300639667972 8.870191433434728 0.045935027093116 0.0468019948153847 7.974584654956268e-07 6.098291927299994 0.1685935596861905 WASLADSYS(ph)DPGLTEDGLGR ddPTM_KYSE-520_SHP099_60min_R1 7 WASLADSYSDPGLTEDGLGR 20 0 J3KQR7;Q9Y4F5-3;Q9Y4F5-2;Q9Y4F5 J3KQR7 CEP170B Centrosomal protein of 170 kDa protein B 1 WASLADS(0.134)Y(0.008)S(0.849)DPGLT(0.009)EDGLGR;WASLADS(0.33)YS(0.67)DPGLTEDGLGR;WASLADS(0.001)YS(0.999)DPGLTEDGLGR;WASLADSYS(1)DPGLTEDGLGR;WASLADS(0.043)YS(0.957)DPGLTEDGLGR;WASLADS(0.346)YS(0.654)DPGLTEDGLGR;WASLADS(0.028)YS(0.972)DPGLTEDGLGR 316.32 1.333e-53 848715000.0 1890602.0 1569451.0 1343989.0 1337506.0 1372928.0 1439199.0 1220962.0 1286353.0 1539105.0 1214077.0 True False 1785726.5382383517 1494052.218166022 1430624.6813984332 1464622.1681041594 1480969.6227082477 1430216.4251972374 1344388.7544008074 1281890.9416800465 1259642.3296796826 1203321.222317612 1.4839982085573291 1.2416071373597637 1.188896742503246 1.2171497858928129 1.230735064952882 1.1885574680072726 1.1172318159663948 1.0652940527477013 1.0468047154138904 1.0 20.198590385557363 -1.0000000000000002 0.19001486412996013 0.9849265741845703 2.8666144846664214 0.8334856713734814 0.052814635957742224 23.68709413759634 0.2765652109947271 0.11666941600884742 13.075993027295242 0.09999999999999995 1.0000000000000002 1.8816879104818511 WASPPLKTS(ph)PQLR ddPTM_KYSE-520_SHP099_60min_R1 1 WASPPLKTSPQLR 13 1 A0A669KBI7;Q9UMN6 A0A669KBI7 KMT2B Histone-lysine N-methyltransferase 2B 1 WAS(0.003)PPLKT(0.315)S(0.682)PQLR 57.595 0.032413 513210000.0 490180.0 482630.0 450750.0 365630.0 388820.0 409130.0 446160.0 505220.0 572980.0 511160.0 True False 462988.73825039633 459443.73035760084 479806.06622549926 400379.36526933196 419417.9219168238 406576.4679109319 491262.20690198743 503467.50973923487 468941.27565037104 506631.52007646224 0.9138569550124335 0.9068597435237751 0.9470513523380575 0.7902772516185049 0.8278559570346592 0.8025092237639898 0.9696637248859779 0.9937548095374132 0.9256061991160698 1.0 18.9505773115413 -6.7871156111092565 23.975035769446958 0.971735897886323 0.8653307348913662 0.5244337167687239 0.0501573286350467 130.71415157880776 122051.77139090006 0.022958401228532335 0.0154862442509101 1.6326172801108175e-07 6.7871156111092565 -0.10640516299495673 WCDDYFFIAHR ddPTM_KYSE-520_SHP099_60min_R1 4 WCDDYFFIAHR 11 0 P36551 P36551 CPOX Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial 0 ;;; 155.26 7.904199999999999e-05 1793497000.0 2136330.0 2293000.0 1527050.0 1589210.0 2816850.0 2496430.0 1913520.0 1503280.0 1680410.0 1560590.0 False True 2017823.5162317266 2182840.8381368327 1625486.086366387 1740248.0405865887 3038520.0693158936 2480848.854366312 2106957.2757555367 1498065.4725481898 1375289.9036888562 1546764.3867206464 1.3045448508869475 1.4112303443737517 1.0508944350681888 1.125089286724628 1.9644362744593407 1.6038957682663313 1.3621707959171316 0.9685156222948054 0.8891398816109675 1.0 20.560822022091955 -7.251627207270547 4.57161375879831 0.9396898019317773 1.4113044524200364 0.4277851586022492 0.23935076689519133 0.20932002696086452 11.964573348571458 0.14133066409339534 0.07242464687931854 5.6023829641470784e-08 7.251627207270547 0.4716146504882591 WCDKSDEDDWSKPLPPSER ddPTM_KYSE-520_SHP099_60min_R1 3 WCDKSDEDDWSKPLPPSER 19 2 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;A0A2R8YDH3;A0A2R8YCU0;A0A2R8Y650;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4 A0A0D9SG12;A0A2R8Y5G6 DDX3X ATP-dependent RNA helicase DDX3X 0 ;; 199.12 2.7269e-13 1814970000.0 2410830.0 2472650.0 1659000.0 1668230.0 2210630.0 2312470.0 1748970.0 1913060.0 1942660.0 1924420.0 False True 2277096.454029545 2353860.1824766845 1765941.794493851 1826778.07762836 2384594.004235867 2298037.0169628067 1925772.9559022966 1906424.041371559 1589921.9144733658 1907371.135976106 1.1938402605973328 1.234086087431582 0.9258511682311488 0.9577465251373314 1.2501992712684833 1.2048190169275974 1.009647739540094 0.9995034555222719 0.8335671461546554 1.0 20.86315415966405 -7.1260967613096575 2.5074955888997863 0.930321591768143 1.1199966700345034 0.347358482010237 0.1127764265488375 0.37731556177592257 4.5739739201251295 0.07119375191210019 0.035484061821609784 7.480028260549667e-08 7.1260967613096575 0.18967507826636043 WCFS(ph)EPGKLDR ddPTM_KYSE-520_SHP099_60min_R1 1 WCFSEPGKLDR 11 1 C9JXU1;A6NN40;Q2M3G4-2;Q2M3G4 C9JXU1 SHROOM1 Protein Shroom1 1 WCFS(1)EPGKLDR 68.972 0.016931 595140000.0 291920.0 309620.0 267280.0 254530.0 326770.0 323010.0 303240.0 312370.0 339750.0 326200.0 True False 275726.6156719074 294745.3904509048 284509.29646312026 278720.4546727653 352484.9399330296 320993.9747755245 333894.45853720274 311286.46137770626 278059.9644005263 323310.1217797597 0.8528239516724242 0.9116491275571219 0.879988832075382 0.8620839123082911 1.0902378743748204 0.9928361444687063 1.0327374122999253 0.9628107516836605 0.8600410122326514 1.0 18.302559148658872 -5.727925433562973 24.999990814874803 0.9902187715438084 0.8793767373724687 0.4922461044773393 0.05626511673433387 172.94173972463327 129006.50026321942 0.017199682274193336 0.022203432922504082 1.8710033557701666e-06 5.727925433562973 -0.11084203417133975 WCNEHLK ddPTM_KYSE-520_SHP099_60min_R1 6 WCNEHLK 7 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;O75369-5;O75369-4;Q60FE5;P21333-2;P21333;A0A087WWY3;F8WE98;Q14315;Q14315-2 O75369-2;Q60FE5;Q14315 FLNB;FLNA;FLNC Filamin-B;Filamin-A;Filamin-C 0 ;;;;; 148.04 0.0023972 11300730000.0 15287900.0 14471100.0 9778530.0 9210380.0 15262900.0 14037000.0 11032590.0 12250800.0 11828500.0 11381490.0 False True 14439849.711326918 13775886.634436052 10408869.69000119 10085731.745998284 16464003.395978339 13949389.876239223 12147871.864902275 12208304.83415821 9680742.57221966 11280658.853265239 1.2800537538769055 1.2211952168421933 0.9227182406095273 0.8940729329013369 1.4594895218564967 1.2365758115450418 1.0768760958838868 1.0822333157096102 0.8581717343058846 1.0 23.427347995829443 -7.477721500621657 2.3606185809878677 0.9339047717108113 1.1559294804043347 0.23011196072958917 0.16132854847210923 0.5172885996123859 5.366471485806588 0.13891578406428484 0.04814689745345189 3.328729458060421e-08 7.477721500621657 0.22202470869352342 WCNVQSTQDEFEELTMS(ph)QK ddPTM_KYSE-520_SHP099_60min_R1 1 WCNVQSTQDEFEELTMSQK 19 0 D6RCP9;D6RFG8;P27707 D6RCP9 DCK Deoxycytidine kinase 1 WCNVQSTQDEFEELT(0.006)MS(0.994)QK 138.08 2.2303e-06 174140000.0 85593.0 86677.0 70916.0 77993.0 67593.0 67680.0 86605.0 79204.0 88817.0 81232.0 True False 80844.98566458472 82512.90681517046 75487.35882961191 85405.43127054941 72912.18454843858 67257.58401537877 95359.8785833482 78929.25981035263 72690.07169436799 80512.34767753977 1.004131515185437 1.0248478549606221 0.9375873515941499 1.0607743251085777 0.905602515038555 0.8353698029618054 1.184413091086032 0.9803373282129646 0.9028437723055748 1.0 16.296922436901887 -9.977353197031405 16.748441943899806 0.99999999999812 0.9834310275978011 0.003212455478305287 0.09225213396872552 0.0 0.0 0.08917057927323577 0.02162704217888612 1.0535297477385074e-10 9.977353197031405 -0.01656897240031885 WCPTTNKPVKS(ph)PTPTVNPR ddPTM_KYSE-520_SHP099_60min_R1 4 WCPTTNKPVKSPTPTVNPR 19 2 C9JA69;Q8WY36-2;Q8WY36;C9JYU6;C9JZA0;C9J8D0;Q8WY36-3 C9JA69 BBX HMG box transcription factor BBX 1 WCPTT(0.001)NKPVKS(0.977)PT(0.021)PT(0.001)VNPR;WCPTTNKPVKS(0.963)PT(0.034)PT(0.003)VNPR;WCPT(0.015)T(0.01)NKPVKS(0.785)PT(0.181)PT(0.01)VNPR;WCPT(0.001)T(0.01)NKPVKS(0.477)PT(0.477)PT(0.035)VNPR 136.56 2.7314e-06 3691570000.0 1912010.0 1729230.0 1615630.0 1648510.0 1712170.0 1980630.0 2073430.0 2702740.0 3145650.0 2161060.0 True False 1805946.9938025617 1646155.1951728512 1719776.0948994004 1805183.8947573947 1846908.0380853042 1968268.153492605 2283032.5391267394 2693364.8257642565 2574479.25538342 2141914.689679238 0.8431460891063831 0.7685437721235158 0.8029153089925094 0.8427898195271865 0.862269653868375 0.9189292939521148 1.0658839729366787 1.2574566292215872 1.2019522849292192 1.0 21.030469589455443 -6.7258395402799644 1.88356313458021 1.1736161923680486 0.8195898970993983 0.8254359018040349 0.06732614947597708 0.12436200262778577 0.9035918842941537 0.033674558638099934 0.021828129041964864 1.8800113003339963e-07 6.7258395402799644 -0.35402629526865026 WCS(ph)LNK ddPTM_KYSE-520_SHP099_60min_R1 2 WCSLNK 6 0 Q075Z2 Q075Z2 BSPH1 Binder of sperm protein homolog 1 1 WCS(1)LNK;WCS(1)LNK 64.866 0.049774 152805000.0 401170.0 432810.0 331894.0 284752.0 332983.0 420220.0 291398.0 454800.0 496960.0 463060.0 True False 378916.3003874315 412017.1579389454 353288.41828917555 311814.74446618964 359186.86768589565 417597.2511073057 320855.35361042054 453222.40495111834 406724.5913421209 458957.64865522826 0.8256018861384653 0.8977236987904632 0.7697625681243803 0.6793976424182588 0.7826144062275319 0.9098818863372016 0.6990957761583118 0.9875037626654344 0.8861919885938209 1.0 18.808001506302336 -7.276519215384295 24.97796700956349 0.952635919749785 0.7973697594319048 0.4988033834173783 0.07480370873448713 754.7114544879558 1250083.417755484 0.041727334133537054 0.02016812161612753 5.2903058970292705e-08 7.276519215384295 -0.1552661603178802 WDAADDIHR ddPTM_KYSE-520_SHP099_60min_R1 1 WDAADDIHR 9 0 Q9HD15;R4GMW4 Q9HD15 SRA1 Steroid receptor RNA activator 1 0 153.05 0.0012679 0.0 385070.0 353480.0 235390.0 220290.0 367720.0 375580.0 270910.0 289670.0 293990.0 308430.0 False True 363709.3994819864 336498.29021570284 250563.61603731615 241226.2953673966 396657.4719594017 373235.86590567254 298296.2266268095 288665.20237948606 240608.8268847996 305697.55015490873 1.1897687740633867 1.1007555999228198 0.8196454826358468 0.789101172859115 1.297548743057967 1.220931818774928 0.9757887378412137 0.9442836628334387 0.787081305567787 1.0 18.22174546502111 -7.160044885193861 3.2582661350396034 0.8962014212498699 1.0587294379492143 0.15953864090250436 0.1608869052630597 0.5372063213170628 10.750958312672909 0.09551071000904303 0.049832005119934054 6.917594725142702e-08 7.160044885193861 0.16252801669934436 WDAWNELK ddPTM_KYSE-520_SHP099_60min_R1 3 WDAWNELK 8 0 B8ZWD1;A0A0A0MTI5;P07108;P07108-3;P07108-2;P07108-4;P07108-5 B8ZWD1 DBI Acyl-CoA-binding protein 0 ;; 166.52 0.0012512 5125150000.0 2929770.0 2639590.0 1775070.0 1706190.0 2812150.0 2899990.0 2196440.0 2278380.0 1982940.0 2162170.0 False True 2767249.817748302 2512780.1342946347 1889493.8524124173 1868345.7846152722 3033450.206055236 2881890.086713331 2418477.590388652 2270476.8315578904 1622888.0818495376 2143014.855942807 1.2912882101934222 1.1725444307240471 0.8816989052468072 0.8718305332481254 1.4155059157164298 1.3447830651857333 1.1285398156162836 1.0594778777485456 0.7572920352600903 1.0 21.031210420514896 -7.569324775314526 5.03850023269537 0.8799795517640306 1.1507409018105315 0.2828716962712341 0.17567374384156195 0.2847719187376051 16.264214557023685 0.13626473792160854 0.049678779638326655 2.6957227555472756e-08 7.569324775314526 0.2707613500465008 WDDPYYDIAR ddPTM_KYSE-520_SHP099_60min_R1 4 WDDPYYDIAR 10 0 Q07960;H0YE29;E9PNR6 Q07960 ARHGAP1 Rho GTPase-activating protein 1 0 ;;; 189.38 2.5681e-05 1353810000.0 1774640.0 1946940.0 1091320.0 1131060.0 1815490.0 1930000.0 1466060.0 1366120.0 1391070.0 1509190.0 False True 1676197.1815428666 1853406.07998348 1161668.2333737377 1238555.6023344107 1958358.7342749208 1917954.154102851 1614263.6521667729 1361381.2485748052 1138486.7540210157 1495819.7507320512 1.1205876782430095 1.2390570983411784 0.7766097705323248 0.8280112638760546 1.309221069795678 1.282209406022489 1.0791832714982907 0.9101238621221226 0.7611122619980399 1.0 20.512504907389083 -7.298781008787777 4.467224700865877 0.8702693617236551 1.090588689113932 0.2169463318881798 0.1744128721354411 0.3544732723763814 16.73741222665096 0.10839102265150288 0.0514147885022317 5.025959575884678e-08 7.298781008787777 0.22031932739027693 WDEAFR ddPTM_KYSE-520_SHP099_60min_R1 5 WDEAFR 6 0 H7C4A8;G3V5Q1;G3V3M6;P27695 H7C4A8 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial 0 ;;;; 159.75 0.049145 1211980000.0 1710210.0 1598650.0 1026410.0 1222310.0 1646360.0 1780220.0 1416720.0 1523120.0 1404480.0 1555300.0 False True 1615341.2420808857 1521848.4543774289 1092574.0309140654 1338477.9748990992 1775919.1654929847 1769108.986640922 1559935.8834547785 1517836.6522188822 1149461.8360596076 1541521.2520050886 1.047887753723653 0.9872380626591616 0.7087635214194626 0.8682838288204676 1.1520562322335874 1.1476384022210562 1.0119457525647069 0.9846355671351275 0.745667200218277 1.0 20.555923348455284 -4.343971180477033 5.131595157556302 0.9583293831311921 1.0468553012053317 0.039252512353088354 0.13953074769280513 0.8240292170056481 34.85766123161556 0.03817176936416557 0.1710299241431382 4.5292763491428824e-05 4.343971180477033 0.08852591807413956 WDEAFRK ddPTM_KYSE-520_SHP099_60min_R1 2 WDEAFRK 7 1 H7C4A8;G3V5Q1;G3V3M6;P27695 H7C4A8 APEX1 DNA-(apurinic or apyrimidinic site) lyase;DNA-(apurinic or apyrimidinic site) lyase, mitochondrial 0 ; 138.9 0.0041797 983810000.0 2377300.0 2512500.0 1474680.0 1244170.0 2191580.0 2228890.0 1499870.0 1583260.0 1881300.0 1818250.0 False True 2245426.42996994 2391795.7286606138 1569740.2323714234 1362415.5427266494 2364044.8776155384 2214978.670745237 1651491.4969205747 1577768.0405956605 1539703.3437136419 1802141.7195770938 1.2459766097068499 1.327196248040855 0.871041503184218 0.7559980038897083 1.3117974307649376 1.2290812907128208 0.9164048970067282 0.8754960963702195 0.8543741743434928 1.0 20.781281037796166 -4.753078434123132 24.998105422149546 0.9832627791144974 1.2865865599822808 0.3630208432941442 0.16397533230775735 218.54985440199465 653420.1458193104 0.046163339630060335 0.1179083619284127 1.76571890086061e-05 4.753078434123132 0.30332378086778333 WDEQTSNTKGDDDEES(ph)DEEAVKK ddPTM_KYSE-520_SHP099_60min_R1 6 WDEQTSNTKGDDDEESDEEAVKK 23 2 O43395 O43395 PRPF3 U4/U6 small nuclear ribonucleoprotein Prp3 1 WDEQTSNTKGDDDEES(1)DEEAVKK;WDEQTSNTKGDDDEES(1)DEEAVKK;WDEQTSNTKGDDDEES(1)DEEAVKK;WDEQTSNTKGDDDEES(1)DEEAVKK;WDEQTSNTKGDDDEES(1)DEEAVKK;WDEQTSNTKGDDDEES(1)DEEAVKK 247.51 1.1457e-28 6792720000.0 3668920.0 3367420.0 2600960.0 2831250.0 2926720.0 3023430.0 2690910.0 3247380.0 3657360.0 3007940.0 True False 3465397.693789305 3205644.0885995287 2768622.043283142 3100331.148753648 3157036.213241111 3004559.6518855896 2962933.4435508 3236115.596724187 2993275.618542778 2981291.9917419096 1.1623811768147347 1.075253312147575 0.9286651730028938 1.0399287145779326 1.0589490133760824 1.0078045559469286 0.9938420831498684 1.0854742191265168 1.0040196085569821 1.0 21.50750625106326 -4.435625383160691 4.11002153939949 1.0184010491175113 1.1554307794128107 0.557087890455773 0.040434294891401906 0.17107505348567667 4.934707356936038 0.010232796900383038 0.04725088222227761 3.667537953552726e-05 4.435625383160691 0.1370297302952994 WDET(ph)PGR ddPTM_KYSE-520_SHP099_60min_R1 1 WDETPGR 7 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDET(1)PGR 97.635 0.027156 169760000.0 579680.0 599820.0 489420.0 533590.0 535450.0 523240.0 464460.0 554840.0 621460.0 546210.0 True False 547523.9948365691 571003.7468518239 520968.79629968706 584302.2331703166 577586.8687062482 519974.2650739766 511412.14949277573 552915.3895406296 508618.52973171766 541371.0043449503 1.011365570823402 1.054736478808518 0.962313814590145 1.079300938692334 1.066896571982311 0.9604767542050697 0.9446611388276617 1.021324350774286 0.9395008702897515 1.0 19.04625809378138 -6.273250396973792 24.95848487215168 0.9727421745714483 1.034455075793493 0.3987769472981283 0.0378940787119636 790.602522391938 1670658.5793168116 0.013236708118873555 0.011750783314962661 5.330274843684257e-07 6.273250396973792 0.06171290122204465 WDET(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 WDETPK 6 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDET(1)PK;WDET(1)PK 99.139 0.058889 1976690000.0 7854800.0 7066100.0 5692900.0 6720400.0 6448600.0 7160500.0 7309300.0 7264600.0 7133700.0 7108500.0 True False 7419078.585844402 6726633.94956767 6059873.442962052 7359104.795438065 6956068.132485042 7115808.663447381 8048195.375893614 7239400.798170379 5838399.905942713 7045524.220329311 1.0530200952879034 0.9547386027229162 0.8601025634794868 1.0445077705082528 0.9873031324502228 1.0099757577889337 1.1423132082451968 1.0275176937553707 0.82866792070581 1.0 22.748275623188107 -4.238151929142721 21.854632480834816 0.9886593830655204 1.053020497013369 0.05375553482702533 0.08491059496076887 4045.374549279329 3796132.644899975 0.02197927555046037 0.9217426008510031 5.7789384756291076e-05 4.238151929142721 0.0643611139478486 WDFTPCK ddPTM_KYSE-520_SHP099_60min_R1 1 WDFTPCK 7 0 C9JA17;C9JVW8;P38606-2;P38606 C9JA17 ATP6V1A V-type proton ATPase catalytic subunit A 0 117.17 0.032617 0.0 542960.0 497680.0 350800.0 338680.0 583900.0 576960.0 438640.0 419620.0 463030.0 439870.0 False True 512840.92643607425 473770.7057670907 373413.1292998457 370868.0453721448 629849.6080634568 573358.9786275547 482982.0119138598 418164.43616004445 378955.4240364264 435973.09401368146 1.1763132484042251 1.0866971202406888 0.8565049871819096 0.8506672784731675 1.444698346553678 1.3151246865926132 1.1078252730401366 0.9591519336900223 0.8692174568564872 1.0 18.7338795765702 -7.287559438257372 4.678363102385017 0.9312573083465944 1.118497144671029 0.18093282095548513 0.1728027377591163 0.40023315970100115 23.0072135287348 0.10807510664922657 0.052264226949949616 5.157515736328122e-08 7.287559438257372 0.18723983632443464 WDGS(ph)EEDEDNSK ddPTM_KYSE-520_SHP099_60min_R1 5 WDGSEEDEDNSK 12 0 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK;WDGS(1)EEDEDNSK 353.91 7.429799999999999e-52 4047900000.0 4877270.0 4668030.0 4277190.0 4228610.0 4212400.0 4240360.0 4342930.0 4737130.0 5369890.0 4136990.0 True False 4606718.110503299 4443770.831944123 4552904.511145964 4630495.823022049 4543891.914722569 4213894.340358327 4781955.747312275 4720698.001684449 4394853.339910944 4100339.487129516 1.1234967555645687 1.0837568074284087 1.1103725741336776 1.1292957174781824 1.1081745618833057 1.027694012553167 1.1662341038643926 1.1512944273278263 1.07182669964423 1.0 21.967311931767615 -8.012505676706105 21.10588567739602 0.9999999976536238 1.1109252126850964 0.4817738972835235 0.035857624842201175 70.87977939465236 119625.95882409977 0.035431574575732344 0.009148391017120887 9.71615251415103e-09 8.012505676706105 0.11092521503147257 WDGS(ph)EEDEDNSKK ddPTM_KYSE-520_SHP099_60min_R1 7 WDGSEEDEDNSKK 13 1 A0A087WUT6;O60841 A0A087WUT6 EIF5B Eukaryotic translation initiation factor 5B 1 WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(0.956)EEDEDNS(0.044)KK;WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(1)EEDEDNSKK;WDGS(0.997)EEDEDNS(0.003)KK 256.96 5.723899999999999e-22 7900930000.0 7842560.0 7227270.0 6738600.0 7421000.0 6993510.0 7162660.0 6850670.0 7312000.0 8785370.0 6886330.0 True False 7407517.563044237 6880061.100846568 7172980.938141222 8126289.608794984 7543859.44937125 7117955.182086175 7543202.57969615 7286636.378633623 7190168.269155128 6825322.473683665 1.0852992795000291 1.0080199327392894 1.0509365624551839 1.1906088891957043 1.1052751688228715 1.0428745615362223 1.1051789287290688 1.0675885874592215 1.0534547337328304 1.0 22.702465779487618 -9.168413157489942 9.763381389145641 1.0000000000000002 1.0793586048072894 0.20407172063180956 0.046677534952483384 0.0 0.0 0.04797658849891766 0.01163603187869594 6.785577928891086e-10 9.168413157489942 0.07935860480728918 WDGVPFILR ddPTM_KYSE-520_SHP099_60min_R1 2 WDGVPFILR 9 0 P11413;P11413-3;P11413-2 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 133.12 0.0039527 570950000.0 659220.0 631160.0 415910.0 323770.0 600250.0 591370.0 403620.0 385080.0 423530.0 403150.0 False True 622651.7524775094 600838.126209526 442720.2240795285 354541.0034549999 647486.260044683 587679.0404724368 444421.84855159535 383744.24735834723 346627.6283224575 399578.404645954 1.558271781552382 1.503680176965264 1.107968345966545 0.8872876995670987 1.6204235577205115 1.4707477522293757 1.1122268956085724 0.9603728402148344 0.8674833882216094 1.0 18.608119088718098 -6.995058649177738 3.7574230357368834 0.9440436941219174 1.3431388125767583 0.4443279896526666 0.209758518441278 0.24423550050072945 7.5900332653847 0.10951678516984585 0.06602322330852871 1.0114428550170489e-07 6.995058649177738 0.3990951184548409 WDKDDFES(ph)EEEDVK ddPTM_KYSE-520_SHP099_60min_R1 12 WDKDDFESEEEDVK 14 1 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK;WDKDDFES(1)EEEDVK 237.24 1.5513999999999999e-18 16862730000.0 20467940.0 18910830.0 16470520.0 17918740.0 19106270.0 17855640.0 17705670.0 20154160.0 21211910.0 18792200.0 True False 19332542.56637319 18002325.34106547 17532236.072963748 19621731.662134383 20609824.749194395 17744196.32754666 19495531.91428705 20084249.922976315 17360361.852736324 18625715.728110358 1.0379489759524287 0.9665306613638448 0.9412919389993532 1.0534753106169668 1.1065252498238 0.9526719180389246 1.0466997456030076 1.0783075515677878 0.9320641475557188 1.0 24.150792529118192 -5.272208004230149 24.88845687452527 1.0288931759876607 0.980384537120611 0.10584827415464682 0.055176135174503226 1326.1787550235406 3065062.078806852 0.015410046871102841 0.02311711742281417 5.3430839246797205e-06 5.272208004230149 -0.0485086388670497 WDKDDFES(ph)EEEDVKSTQPISSVGKPASVIK ddPTM_KYSE-520_SHP099_60min_R1 2 WDKDDFESEEEDVKSTQPISSVGKPASVIK 30 3 A0A2R8Y880;Q7Z6E9;Q7Z6E9-2;Q7Z6E9-4 A0A2R8Y880 RBBP6 E3 ubiquitin-protein ligase RBBP6 1 WDKDDFES(1)EEEDVKSTQPISSVGKPASVIK;WDKDDFES(1)EEEDVKSTQPISSVGKPASVIK 190.95 1.4867e-15 1920940000.0 737250.0 962460.0 869120.0 625360.0 643490.0 647700.0 523060.0 574700.0 1115850.0 575830.0 True False 696353.2728285623 916221.9769180864 925144.8658411676 684794.0263786594 694129.0020427371 643657.4640478847 575936.0093736628 572706.4998359886 913239.7682894106 570728.5941889611 1.2201128170529485 1.6053549554847375 1.620989162380856 1.199859326045845 1.21621556920437 1.1277820501749345 1.0091241532975963 1.0034655800798595 1.6001296896420234 1.0 19.12244532001853 -5.363935738560272 5.671569214932247 1.1559312355489657 1.4930485300665042 0.36013602584837334 0.19367619316509904 0.2358221992700334 10.747103799538603 0.054567631583294474 0.08170935383815589 4.325778337314388e-06 5.363935738560272 0.33711729451753847 WDKDEYEK ddPTM_KYSE-520_SHP099_60min_R1 1 WDKDEYEK 8 1 R4GNG8;Q96NC0 R4GNG8 ZMAT2 Zinc finger matrin-type protein 2 0 83.883 0.0071855 290930000.0 481280.0 533500.0 298060.0 309310.0 541610.0 711320.0 526680.0 670220.0 616230.0 654760.0 False True 454582.43899210636 507869.8592001741 317273.4245128617 338706.72940255725 584231.6256606427 706880.3880292439 579921.9543014579 667895.1632505233 504338.1658941465 648959.3357955724 0.7004790807652448 0.7825911905213078 0.4888956934780972 0.5219228859499029 0.900259220316819 1.089252205860734 0.8936183244679264 1.0291787580676948 0.7771491033037812 1.0 19.307768555305206 -5.8615012339285855 5.831452830135647 0.959041089832319 0.6264313123380928 0.6770854179013099 0.11026019171927368 0.12686111327661018 6.236408252676551 0.035404605771963193 0.04045601025784857 1.3756209018204786e-06 5.8615012339285855 -0.33260977749422616 WDKDNLQILR ddPTM_KYSE-520_SHP099_60min_R1 1 WDKDNLQILR 10 1 A0A0B4J1W3;Q9BXJ9;Q9BXJ9-4 A0A0B4J1W3 NAA15 N-alpha-acetyltransferase 15, NatA auxiliary subunit 0 92.866 0.0035488 768270000.0 550030.0 539070.0 315270.0 292690.0 496790.0 530540.0 366210.0 375220.0 356430.0 374090.0 False True 519518.7394423792 513172.26803943363 335592.8086498355 320507.16959954303 535884.5466515588 527228.7030661793 403230.0806651803 373918.449397006 291711.2968691082 370775.8536376155 1.4011665925530854 1.3840498592472847 0.905109664929349 0.8644229834685959 1.445305948038664 1.421960728816704 1.087530584068952 1.008475729281071 0.7867591538315695 1.0 18.500187767560003 -7.229066319167524 2.689181853548417 0.9051179072380061 1.2209920065833595 0.3099414593262183 0.20264973075605464 0.4008050278512181 5.6743828952225766 0.1370869977890379 0.06333223597014843 5.9011096008623645e-08 7.229066319167524 0.3158740993453534 WDPTANEDPEWILVEK ddPTM_KYSE-520_SHP099_60min_R1 3 WDPTANEDPEWILVEK 16 0 Q14257;Q14257-2;A8MXP8 Q14257 RCN2 Reticulocalbin-2 0 ;; 140.08 0.00012751 107429000.0 165446.0 205764.0 187346.0 120218.0 194367.0 190348.0 137794.0 148689.0 185252.0 186750.0 False True 156268.38057157563 195878.78858193924 199422.6229241987 131643.4825751403 209662.5771030485 189159.9675259943 151723.5622598448 148173.23256327352 151614.90662288826 185095.5402893015 0.8442579455308893 1.05825774233017 1.0774037160079826 0.7112190945788512 1.1327262492405223 1.021958536820175 0.8197040405333547 0.8005229749548856 0.8191170159254862 1.0 17.497910609623588 -6.76673746320103 24.99652325772862 0.8432129011763106 0.9780489420441224 0.16004876240455224 0.12601351677860034 214.3890840913841 1011481.4187628512 0.05100697268493642 0.035529995468664054 1.7110493546389493e-07 6.76673746320103 0.13483604086781176 WDQTADQT(ph)PGAT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 WDQTADQTPGATPK 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 2 WDQT(0.02)ADQT(0.98)PGAT(1)PK 86.641 0.0075802 0.0 395660.0 435870.0 423990.0 420900.0 433880.0 395440.0 345970.0 407300.0 539470.0 417780.0 True False 373711.95107134414 414930.1509457921 451321.07380798535 460902.2094518001 468023.8875604948 392971.9122789803 380944.023941816 405887.17136453476 441515.84693201457 414078.7942279213 0.902514101858696 1.0020560258813982 1.0899400792776768 1.1130785151922216 1.130277362870412 0.9490268947766421 0.9199795528097802 0.9802172364835529 1.0662604631933676 1.0 18.65954579584642 -6.290821237908123 24.987658834331985 0.9779155750390055 1.0510374067837884 0.1734851398657733 0.06970568131738476 1276.4809326155817 1085572.9772301659 0.026840963600381185 0.023676034607698744 5.118924947744449e-07 6.290821237908123 0.07312183174478293 WDQTADQT(ph)PGATPK ddPTM_KYSE-520_SHP099_60min_R1 1 WDQTADQTPGATPK 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDQTADQT(1)PGATPK 171.78 0.00054247 0.0 319720.0 351600.0 214190.0 232090.0 241420.0 349420.0 281200.0 296560.0 351280.0 303500.0 True False 301984.49425398116 334708.60823764076 227997.0301161171 254147.76381959714 260418.38050810058 347239.14016923174 309626.44024753204 295531.30257762445 287496.4070481737 300811.2261194269 1.0039003469042358 1.112686559459573 0.757940563114485 0.8448745982594957 0.8657202853350636 1.1543423583246597 1.0293048043513022 0.9824477177600206 0.9557369608740367 1.0 18.198498883090032 -6.2275813492734295 24.979788619422404 1.0235780909587524 0.9150482661445786 0.21844856117126832 0.10147816318144849 1095.9924790218686 808602.1907396796 0.03639316819328473 0.036391444563912356 5.92132162066235e-07 6.2275813492734295 -0.10852982481417384 WDQTADQTPGAT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 6 WDQTADQTPGATPK 14 0 O75533 O75533 SF3B1 Splicing factor 3B subunit 1 1 WDQTADQT(0.056)PGAT(0.944)PK;WDQTADQTPGAT(1)PK;WDQTADQTPGAT(1)PK;WDQTADQTPGAT(1)PK;WDQTADQTPGAT(1)PK;WDQTADQTPGAT(1)PK 271.82 3.397799999999999e-26 6584300000.0 7603090.0 9407830.0 6575810.0 5501010.0 6059940.0 8740320.0 6439180.0 7865860.0 8367810.0 8834640.0 True False 7181331.441315852 8955863.725359282 6999697.234268008 6023824.336461033 6536822.801657938 8685768.420822905 7090115.154740762 7838575.167565532 6848426.639324125 8756371.96284591 0.8201263573300563 1.022782467825697 0.7993832678612062 0.6879360952253596 0.7465218276923682 0.9919368955176205 0.8097092248735859 0.8951852663209519 0.7821077802978936 1.0 23.061901809539158 -6.239963983977722 24.984521577252064 0.8838570267360073 0.8189084497255992 0.1273920960734355 0.10270857103251803 2323.8949925340166 2703626.725240656 0.03585205587137172 0.03582113762151945 5.754876605246583e-07 6.239963983977722 -0.06494857701040813 WDS(ph)YENLSADGEVLHTQGPVDGSLYAK ddPTM_KYSE-520_SHP099_60min_R1 10 WDSYENLSADGEVLHTQGPVDGSLYAK 27 0 Q68CZ2;E9PCX8;C9JHU5;Q68CZ2-3 Q68CZ2 TNS3 Tensin-3 1 WDS(0.915)Y(0.014)ENLS(0.071)ADGEVLHTQGPVDGSLYAK;WDS(0.82)Y(0.169)ENLS(0.011)ADGEVLHTQGPVDGSLYAK;WDS(0.995)YENLS(0.005)ADGEVLHTQGPVDGSLYAK;WDS(1)YENLSADGEVLHTQGPVDGSLYAK;WDS(0.999)YENLS(0.001)ADGEVLHTQGPVDGSLYAK;WDS(1)YENLSADGEVLHTQGPVDGSLYAK;WDS(1)YENLSADGEVLHTQGPVDGSLYAK;WDS(1)YENLSADGEVLHTQGPVDGSLYAK;WDS(1)YENLSADGEVLHTQGPVDGSLYAK;WDS(1)YENLSADGEVLHTQGPVDGSLYAK 335.45 1.4526999999999997e-78 21839948000.0 6667202.0 7072331.0 5886436.0 6892220.0 6080070.0 6840189.0 6272563.0 6224211.0 7971110.0 6003440.0 True False 6297359.01432232 6732565.602974748 6265885.083190604 7547254.516578506 6558536.918133909 6797496.843211719 6906654.882355546 6202620.664782771 6523757.3593309205 5950254.192205641 1.0583344527652883 1.1314752925671432 1.053044942415807 1.2683919497867515 1.1022280235901636 1.1423876398618227 1.1607327450653642 1.042412721276296 1.0963829692984415 1.0 22.504519870350016 -7.89949354350086 1.0845506891704604 1.0055549224797171 1.1314592349103607 0.28120390007724216 0.0610193986136169 0.6216526334855969 1.6281041515101173 0.05667460183718549 0.018660926098946536 1.2603943755829085e-08 7.89949354350086 0.1259043124306436 WDTAFDHEK ddPTM_KYSE-520_SHP099_60min_R1 4 WDTAFDHEK 9 0 P52701-2;P52701;A0A087WWJ1;P52701-3;A0A494C0M1;P52701-4 P52701-2 MSH6 DNA mismatch repair protein Msh6 0 ;;; 240.13 3.9649e-13 3686810000.0 2706490.0 2565900.0 1603810.0 1523300.0 2517200.0 2625710.0 1971670.0 2039340.0 2031130.0 2109870.0 False True 2556355.6044459436 2442630.312505579 1707194.1587867315 1668073.9740031546 2715289.3190911696 2609321.969932329 2170985.645244845 2032266.005525536 1662327.9926205764 2091178.1932540233 1.2224475239329418 1.168064166117126 0.8163790939930446 0.7976718480444327 1.2984495189604022 1.2477760041443606 1.03816386965409 0.9718282316071708 0.7949241236271094 1.0 20.99588457126626 -7.354613064903569 3.1393571963715003 0.8964382987915867 1.0816032859179519 0.17353566049970415 0.16626868618350898 0.521458099290289 9.761884485711214 0.11843605725281871 0.050056246256631035 4.4196404028829836e-08 7.354613064903569 0.1851649871263652 WDTGENPIY(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 WDTGENPIYK 10 0 P05556 P05556 ITGB1 Integrin beta-1 1 WDTGENPIY(1)K 100.48 0.014601 0.0 395230.0 425370.0 376630.0 382110.0 473890.0 449370.0 383840.0 508680.0 574950.0 433930.0 True False 373305.80402852787 404934.5867066128 400908.1724293066 418425.61951443955 511182.44693473534 446565.31514466257 422642.2931173988 506915.5078068045 470553.5733100294 430085.7177924313 0.8679800062756172 0.9415206549640484 0.9321587670641823 0.9728888968044757 1.1885594563766544 1.0383170067511627 0.982693160067629 1.1786383198417505 1.0940925351469792 1.0 18.714264697762736 -5.563436008247375 8.023778271102744 1.0825272618872746 0.9224198663307731 0.5738917669461598 0.06540708208382251 0.17248218703152596 29.745067400714653 0.01952628757236249 0.02533726889940911 2.732524041949672e-06 5.563436008247375 -0.16010739555650144 WDYEKNEWK ddPTM_KYSE-520_SHP099_60min_R1 1 WDYEKNEWK 9 1 P13073 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial 0 73.499 0.020954 665090000.0 420370.0 701280.0 463050.0 493100.0 679140.0 634540.0 431380.0 554960.0 889010.0 444930.0 False True 397051.23811318073 667589.4561572592 492898.9439061958 539964.0757440786 732584.4542219837 630579.6004893389 474988.1002630872 553034.9732886378 727588.1941183569 440988.2663503025 0.9003668995532411 1.5138485694468664 1.117714418992404 1.2244409136164043 1.6612334388961938 1.4299237612558902 1.0770991804253056 1.254080925702749 1.649903749458022 1.0 18.750380744044016 -4.244675642304219 23.76771136065578 1.3296633528902337 0.9003662236995575 0.24867178094119657 0.22150449627223506 2438.0428101644084 3456561.098512969 0.05447130250096585 1.3834746053749747 5.692779437166649e-05 4.244675642304219 -0.4292971291906762 WDYEKNEWKK ddPTM_KYSE-520_SHP099_60min_R1 1 WDYEKNEWKK 10 2 P13073 P13073 COX4I1 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial 0 88.441 0.0025923 582850000.0 232760.0 499800.0 349650.0 337890.0 428640.0 297080.0 247240.0 269910.0 667180.0 172800.0 False True 219848.3388044436 475788.8577849051 372188.9984597806 370002.9640096673 462371.52937201626 295225.81352376967 272233.43202987115 268973.7452074674 546036.9302391257 171269.1264363657 1.2836425535581117 2.7780188273552175 2.1731237042191944 2.160359965093535 2.699678214005537 1.7237538350699741 1.5895067470377873 1.570474205153393 3.188180739872013 1.0 17.385905584110457 -6.30401176702246 24.965709457292597 1.8359828986194313 2.2442211707003943 0.08966930388635286 0.640181797853956 1242.0261050870904 728357.3903282818 0.21737772564865718 0.19171043178893182 4.965788666769469e-07 6.30401176702246 0.40823827208096297 WDYLTQVEK ddPTM_KYSE-520_SHP099_60min_R1 2 WDYLTQVEK 9 0 Q9HB71-3;Q9HB71 Q9HB71-3 CACYBP Calcyclin-binding protein 0 ; 155.42 0.0015075999999999998 2540900000.0 1904110.0 2201760.0 1276140.0 1376470.0 1996060.0 2066240.0 1515760.0 1756210.0 1745510.0 1812310.0 False True 1798485.2225508187 2095984.144690862 1358402.0262961942 1507289.2949492058 2153138.5659721624 2053343.8297271887 1668987.813192028 1750118.1174124947 1428569.3847263088 1796254.3433558447 1.0012419617540387 1.166863786547649 0.7562414706585289 0.8391291024706551 1.198682454929835 1.1431253248306905 0.9291489367112391 0.974315315582115 0.7953046237635757 1.0 20.776560214457927 -6.958692426526245 24.999465602391126 0.9212318542493574 1.0145435207386477 0.09524710845243789 0.14006745929342646 405.0206784075653 245118.86500939654 0.06302462494115958 0.042491146624569584 1.0997844465369497e-07 6.958692426526245 0.09331166648929035 WEAERDDWLHNR ddPTM_KYSE-520_SHP099_60min_R1 6 WEAERDDWLHNR 12 1 Q03701 Q03701 CEBPZ CCAAT/enhancer-binding protein zeta 0 ;;;;; 208.51 1.4109999999999998e-10 5607400000.0 4049640.0 5343840.0 4466550.0 3615420.0 4944170.0 4568570.0 3815390.0 4086010.0 5116210.0 3285450.0 False True 3824998.3964428045 5087113.9051326355 4754470.959732679 3959028.42978434 5333248.050520823 4540055.8600050025 4201086.85581803 4071836.584991903 4187235.233158546 3256343.469041418 1.1746298978617216 1.5622166253334906 1.4600643344088855 1.2157895711627047 1.6378026769058216 1.3942189769500808 1.2901239982079409 1.2504321560988605 1.2858702630626242 1.0 21.63482144796667 -8.093501258485398 0.6733377986844493 1.0022201807616948 1.4163457221600224 0.430896750232989 0.13612015758548215 0.8000340089511261 0.8221013450752044 0.13556508897951414 0.05393818233068219 8.063038648684195e-09 8.093501258485398 0.4141255413983276 WEDRWEWLR ddPTM_KYSE-520_SHP099_60min_R1 4 WEDRWEWLR 9 1 A0A087WUZ3;Q01082;Q01082-3;Q01082-2 A0A087WUZ3 SPTBN1 Spectrin beta chain, non-erythrocytic 1 0 ;;; 202.44 1.6402000000000002e-06 2934720000.0 2850110.0 2814900.0 2287040.0 2362540.0 3774360.0 3388300.0 2650510.0 2822650.0 2371240.0 2268250.0 False True 2692008.716746574 2679667.97874896 2434466.2577933804 2587075.0912764478 4071380.658829237 3367152.362873934 2918449.4172848016 2812858.8859614613 1940682.5900959664 2248155.069671797 1.1974301742181752 1.1919409007405162 1.082872925731401 1.1507547349276617 1.810987468681868 1.4977402619141824 1.298153075228418 1.2511854381878134 0.8632334202725981 1.0 21.100310120243634 -7.673812397979662 4.829955572901171 0.9332480148540451 1.3204962329545062 0.36648694478795907 0.20009217749601219 0.2418880541392277 9.439517421631157 0.16789814662299204 0.05755789238526687 2.1192764005626394e-08 7.673812397979662 0.3872482181004612 WEGGDS(ph)NSDDYDLESDMSNGWDPNEMFK ddPTM_KYSE-520_SHP099_60min_R1 1 WEGGDSNSDDYDLESDMSNGWDPNEMFK 28 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7;H3BSK9 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 WEGGDS(0.376)NS(0.292)DDY(0.331)DLESDMSNGWDPNEMFK 77.873 0.010076 60130000.0 79921.0 63303.0 48048.0 63556.0 60003.0 60435.0 63968.0 52585.0 67417.0 62185.0 True False 75487.62281143629 60261.82886025982 51145.250959518125 69596.34313119181 64724.894729631145 60057.80274777501 70434.50970751808 52402.59490843125 55175.77224426873 61634.08927919796 1.2247706373900136 0.977735366337257 0.8298208273644451 1.129185876600292 1.0501476615713758 0.9744250860220797 1.1427849511729598 0.8502209657232266 0.8952151786380177 1.0 15.911440893308958 -7.275942800518405 24.961815918213166 0.9045385540498229 1.0364586971825738 0.23115834604512886 0.10848889862642412 1231.5553020082918 2119616.2500266163 0.05895502728595496 0.02853805171897313 5.297332086961498e-08 7.275942800518405 0.1319201431327509 WEGGDSNS(ph)DDYDLESDMSNGWDPNEMFK ddPTM_KYSE-520_SHP099_60min_R1 3 WEGGDSNSDDYDLESDMSNGWDPNEMFK 28 0 Q8WWM7-6;Q8WWM7-8;Q8WWM7-5;Q8WWM7-4;Q8WWM7-9;Q8WWM7-2;Q8WWM7;Q8WWM7-3;H3BUF6;Q8WWM7-7;H3BSK9 Q8WWM7-6 ATXN2L Ataxin-2-like protein 1 WEGGDS(0.002)NS(0.795)DDY(0.203)DLESDMSNGWDPNEMFK;WEGGDS(0.069)NS(0.504)DDY(0.427)DLESDMSNGWDPNEMFK;WEGGDS(0.028)NS(0.846)DDY(0.126)DLESDMSNGWDPNEMFK 211.72 2.1299e-22 218071000.0 254743.0 241536.0 205947.0 214898.0 221514.0 220287.0 215005.0 229285.0 292125.0 217787.0 True False 240611.8979724196 229932.24800707275 219222.67314685055 235321.84130856054 238945.8915577476 218912.1071216863 236739.80364658826 228489.66385052135 239082.46387197604 215857.57661572215 1.114678955192599 1.0652035087765617 1.015589429770719 1.0901717928923542 1.1069608734796839 1.0141506754307816 1.0967407647128433 1.0585204718446706 1.107593569891687 1.0 17.719720206819648 -11.314922039446058 2.210181377977351 0.6412250453628492 1.0722402256847117 0.2916203766172406 0.03464058682783857 1266618.7551489722 300694.0678072979 2263024.636933857 0.008534189796456773 4.84259289559152e-12 11.314922039446058 0.4310151803218625 WEKLEGQGDVPT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 WEKLEGQGDVPTPK 14 1 Q9Y2Z0-2;Q9Y2Z0 Q9Y2Z0-2 SUGT1 Suppressor of G2 allele of SKP1 homolog 1 WEKLEGQGDVPT(1)PK 83.77600000000001 0.012896000000000001 501520000.0 728780.0 740490.0 594300.0 575680.0 576990.0 758140.0 603060.0 670680.0 1073200.0 657630.0 True False 688353.1206130881 704915.7489018505 632609.5289136206 630392.4541154974 622395.830375979 753408.1670422459 664023.1900984225 668353.5676178895 878333.933170404 651803.9098283972 1.056073936092702 1.081484382453975 0.97055190890182 0.9671504644417722 0.9548820143466757 1.155881632008925 1.0187468655615188 1.0253905469727074 1.3475432103523992 1.0 19.314078480507032 -7.632126470878965 20.577794787631714 1.178099766636345 1.0279190436924572 0.26560908394861305 0.09637462927406625 3.401243689631945 627.5320196139247 0.061792566668287086 0.023355154135568622 2.3327786349834193e-08 7.632126470878965 -0.15018072294388785 WENFIHSENR ddPTM_KYSE-520_SHP099_60min_R1 1 WENFIHSENR 10 0 P19784;H3BV19;H3BSA1 P19784 CSNK2A2 Casein kinase II subunit alpha 0 178.67 3.189e-05 197080000.0 166680.0 156160.0 107540.0 106280.0 154280.0 157900.0 131760.0 134350.0 121420.0 140980.0 False True 157433.92813165754 148657.83919906142 114472.20047008379 116380.81924575278 166420.9582668784 156914.48752996887 145079.5866536798 133883.97120752576 99373.18874911535 139731.02688078012 1.126692701299488 1.0638856846439535 0.8192325142486256 0.8328917481229852 1.1910093411742433 1.122975269220986 1.0382775385846348 0.9581549223262839 0.7111748261458175 1.0 17.092292877124013 -7.532483341413224 24.527478419691064 0.848613127543196 1.0218329164351156 0.21506602692350718 0.13055184161949263 272.36593550064816 695525.3261709309 0.09297210113615717 0.03524290926964625 2.9343820582772525e-08 7.532483341413224 0.1732197888919197 WEWLVNQHR ddPTM_KYSE-520_SHP099_60min_R1 4 WEWLVNQHR 9 0 Q9BWJ5 Q9BWJ5 SF3B5 Splicing factor 3B subunit 5 0 ;;; 168.8 0.00015754 2344710000.0 1576580.0 1698690.0 1075555.0 1183680.0 2045010.0 1819840.0 1483550.0 1233992.0 1232620.0 1209723.0 False True 1489123.9645656883 1617082.3826143264 1144886.9962488457 1296176.5913136308 2205940.6524847588 1808481.7035246273 1633521.7120527243 1229711.5697678984 1008807.2798215649 1199005.795370251 1.241965610437979 1.3486860437692665 0.9548636050548084 1.0810428075648906 1.8398081652337368 1.5083177333318654 1.3623968444191679 1.0256093627872462 0.8413698113194248 1.0 20.19340720133045 -7.362327739537564 3.9354392980108135 0.9254203226547439 1.3363865757914202 0.3712916176929627 0.227575501748865 0.28730858967349127 7.900619636912235 0.1528723455958251 0.06781121221426549 4.341824455188351e-08 7.362327739537564 0.41096625313667623 WFDFPFTR ddPTM_KYSE-520_SHP099_60min_R1 1 WFDFPFTR 8 0 Q5T4S7-3;Q5T4S7-4;Q5T4S7;Q5T4S7-2;Q5T4S7-5;A0A0A0MSW0 Q5T4S7-3 UBR4 E3 ubiquitin-protein ligase UBR4 0 116.37 0.0075663 33695000.0 104680.0 107730.0 84946.0 72199.0 135760.0 104660.0 81840.0 76016.0 77126.0 75534.0 False True 98873.1917255934 102554.4890939733 90421.75507840556 79060.77125257911 146443.5396312638 104006.77811834423 90113.18588142969 75752.3182382678 63121.86258824134 74864.8275245627 1.3206895012635098 1.3698620899156655 1.2078002189845256 1.056046929736661 1.9561060176518346 1.3892609060539174 1.2036785345142762 1.011854575012731 0.8431444334461524 1.0 16.1920004603974 -7.139515600380409 2.4161866437983788 0.9299342520047852 1.3829210452613137 0.4348073150321774 0.22067760723423052 0.31093500033154303 3.496863016701151 0.1395132309844309 0.0679158571433738 7.252444259708169e-08 7.139515600380409 0.45298679325652846 WFFYDER ddPTM_KYSE-520_SHP099_60min_R1 1 WFFYDER 7 0 Q9BYX2-2;Q9BYX2;Q9BYX2-3 Q9BYX2-2 TBC1D2 TBC1 domain family member 2A 0 101.52 0.036681 298130000.0 646810.0 513800.0 341000.0 277010.0 404950.0 473250.0 410550.0 336320.0 318040.0 372780.0 False True 610930.1599162314 489116.2767704771 362981.40561929066 303336.9471139069 436817.26114967867 470296.2712068254 452052.4005818785 335153.38441767776 260291.95313596286 369477.4592184517 1.6534977836226323 1.3238054570503301 0.9824182681863678 0.8209890469517397 1.1822568610103292 1.2728686404892837 1.2234911475739167 0.9071010316207679 0.7044866923317954 1.0 18.49512682672245 -4.4825030810649436 2.701979520686904 1.024991063370615 1.6589594169949662 0.5870539924934063 0.17040149356693668 0.24917504641147264 3.1664227629602597 0.04975152480259911 0.27919940906436264 3.2922811764448535e-05 4.4825030810649436 0.6339683536243512 WFLTCINQPQFR ddPTM_KYSE-520_SHP099_60min_R1 2 WFLTCINQPQFR 12 0 P26641;P26641-2 P26641 EEF1G Elongation factor 1-gamma 0 ; 185.61 5.1249e-07 94355000.0 67803.0 92132.0 75266.0 58991.0 96446.0 80624.0 60548.0 51820.0 67150.0 51532.0 False True 64041.83242807049 87705.84042704865 80117.7667898579 64597.48690370914 104035.75149732521 80120.79571004573 66668.78273153458 51640.24851487894 54957.252713746406 51075.46657128933 1.2538668117438176 1.7171813850125468 1.5686154658623108 1.2647458993555398 2.0369026164864454 1.5686747687016418 1.3052995343367182 1.011057793134426 1.0760009923167126 1.0 15.640342857499844 -6.997804308755359 2.794563888463019 1.0341077925176534 1.5820046256305962 0.571170103388415 0.20956182505475146 0.20098264489388065 3.162056556403149 0.10817512214663952 0.061753585419311745 1.0050685678787516e-07 6.997804308755359 0.5478968331129428 WFNGQPIHAELS(ph)PVTDFR ddPTM_KYSE-520_SHP099_60min_R1 1 WFNGQPIHAELSPVTDFR 18 0 P0DN76;Q01081-2;Q01081;Q01081-4 P0DN76 U2AF1 Splicing factor U2AF 35 kDa subunit 1 WFNGQPIHAELS(0.983)PVT(0.017)DFR 175.93 6.321899999999999e-09 29173000.0 52934.0 56356.0 52271.0 50255.0 57956.0 60861.0 51838.0 56384.0 75558.0 62215.0 True False 49997.64549868712 53648.57316791941 55640.47229655704 55031.22009028328 62516.80747546793 60481.14392375835 57078.29093012645 56188.41706412456 61838.57186217807 61663.82350253753 0.810810012399404 0.8700169746320013 0.9023195309040053 0.8924393098656732 1.013832810300764 0.9808205279594685 0.925636583786888 0.9112055314217151 1.0028338878407912 1.0 15.912136726943453 -4.745910243285544 0.9113875130575821 0.9645500009339228 0.7903722577062614 0.6709448188857285 0.036351841521627605 0.7542944720386716 0.8072145410530239 0.014266260620349329 0.11322959575785428 1.7951045872013542e-05 4.745910243285544 -0.17417774322766144 WFSNPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 7 WFSNPSR 7 0 Q9NRA8;Q9NRA8-3;B1AKL4;Q9NRA8-2 Q9NRA8 EIF4ENIF1 Eukaryotic translation initiation factor 4E transporter 1 WFSNPS(1)R;WFSNPS(1)R;WFSNPS(1)R;WFSNPS(1)R;WFSNPS(1)R;WFSNPS(1)R;WFSNPS(1)R 131.62 0.0019831 5417040000.0 2312230.0 2143610.0 1894310.0 1996460.0 1963740.0 2127930.0 1965040.0 2048770.0 2312810.0 2178690.0 True False 2183965.992583772 2040627.75797579 2016420.2536031657 2186202.9581424138 2118275.1658478044 2114648.799554447 2163685.420142282 2041663.2950565137 1892862.0051955301 2159388.5015951735 1.0113816902194501 0.9450026044263674 0.9337922528130557 1.01241761569418 0.9809606582062477 0.9792813094967967 1.0019898774787095 0.945482155502961 0.8765731612432148 1.0 21.04219139531642 -7.5103608470402206 24.353217992208997 0.9292002854051372 0.9783358793560557 0.18895244790182542 0.03701126985762949 581.6254821291776 1131552.0169356253 0.021060401587782638 0.009294099686735724 3.0877288311237676e-08 7.5103608470402206 0.04913559395091849 WGDEHIPGSPYR ddPTM_KYSE-520_SHP099_60min_R1 5 WGDEHIPGSPYR 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 ;;;; 136.7 7.1017e-05 10655500000.0 17616500.0 16533080.0 10456800.0 10734660.0 17701430.0 16233640.0 12351240.0 12926710.0 12500290.0 13321230.0 False True 16639277.627377903 15738806.020140996 11130862.059471548 11754878.858906774 19094431.833640564 16132319.831196982 13599823.875686072 12881870.26012679 10230552.442667432 13203214.26596011 1.2602444595840943 1.1920435208506786 0.843041840816641 0.8903043321210529 1.4461957103028242 1.2218479156843307 1.0300388679405499 0.9756616836354921 0.774853171098143 1.0 23.654385854481706 -7.215760916758605 2.5669349890976156 0.893078575256268 1.1315218117948265 0.25172626605638293 0.17333939176944407 0.46364017555994047 5.92826130176344 0.11678279755177476 0.05389009987715854 6.084698775466657e-08 7.215760916758605 0.23844323653855848 WGDIEFPPPFGR ddPTM_KYSE-520_SHP099_60min_R1 2 WGDIEFPPPFGR 12 0 P53396;P53396-2 P53396 ACLY ATP-citrate synthase 0 ; 159.79 2.9249e-05 143321000.0 373600.0 359330.0 268830.0 217800.0 345600.0 349050.0 264310.0 296180.0 337820.0 290000.0 False True 352875.6632468637 342067.2474346741 286159.21194320853 238499.6465160423 372796.7538049854 346871.4494764769 291029.0342170166 295152.6207089314 276480.4037491853 287430.8256165863 1.22768900130975 1.190085463870772 0.9955759314588128 0.8297636344481195 1.2969964268977592 1.2067997534098185 1.012518520213382 1.0268648815790045 0.9619024095835562 1.0 18.132855266849287 -4.666660875260585 5.8996297442543755 1.0490061567718432 1.2166413447490687 0.23066106351470017 0.12226239985281812 0.32771486443555675 16.46141790744719 0.03354204566447943 0.09118092032109484 2.154463420052364e-05 4.666660875260585 0.16763518797722554 WGDYDSHDIER ddPTM_KYSE-520_SHP099_60min_R1 3 WGDYDSHDIER 11 0 Q6P2Q9 Q6P2Q9 PRPF8 Pre-mRNA-processing-splicing factor 8 0 ;; 187.85 1.5712999999999999e-06 920630000.0 2724280.0 2539850.0 1567360.0 1463680.0 2323040.0 2447000.0 1932300.0 1836250.0 1911920.0 2205470.0 False True 2573158.757682461 2417831.793607429 1668394.5334646665 1602787.7071285597 2505850.0317104515 2431727.3653314393 2127635.741430672 1829880.4773339718 1564763.5235810285 2185931.251629694 1.1771453268551215 1.106087756330326 0.7632419968472548 0.7332287810669349 1.146353541467622 1.1124445764332684 0.973331498803743 0.8371171215790648 0.7158338225021663 1.0 21.05981659773904 -7.236802496621763 4.980651254631856 0.831039249733071 0.9970119511254643 0.1595781106830959 0.15691365465662008 0.3618477357361081 25.573150735810195 0.0871602224931374 0.046427966057880236 5.796922621762781e-08 7.236802496621763 0.16597270139239328 WGEAS(ph)NDEDDPKDK ddPTM_KYSE-520_SHP099_60min_R1 2 WGEASNDEDDPKDK 14 1 Q5SXM2;A0A1B0GUB4 Q5SXM2 SNAPC4 snRNA-activating protein complex subunit 4 1 WGEAS(1)NDEDDPKDK;WGEAS(1)NDEDDPKDK 156.67 2.1075e-05 893630000.0 832800.0 785210.0 665850.0 724970.0 730490.0 718470.0 688240.0 766040.0 904400.0 695890.0 True False 786602.9238543579 747487.3329757618 708771.7563976678 793870.9308298224 787975.4070804496 713985.7622270848 757814.0157751116 763382.78603508 740183.7580686858 689724.9559942277 1.1404588409019971 1.083746972586008 1.0276150663215955 1.1509963847624884 1.1424487402294956 1.0351746098528298 1.0987191476676883 1.106793047577459 1.0731578604426781 1.0 19.395661642515712 -8.125498337026958 3.910624841996305 1.0000134075782976 1.0964060220986804 0.3556679123645141 0.039755133965071555 0.7659039755802816 21.541870373780615 0.03897496749113195 0.010244922323690942 7.490342266598903e-09 8.125498337026958 0.09639261452038284 WGEDNHWICKPWNLAR ddPTM_KYSE-520_SHP099_60min_R1 1 WGEDNHWICKPWNLAR 16 1 Q14166 Q14166 TTLL12 Tubulin--tyrosine ligase-like protein 12 0 71.513 0.017212 88890000.0 291370.0 423040.0 321310.0 287300.0 602480.0 449280.0 355300.0 240390.0 256050.0 198780.0 False True 275207.1252683049 402716.52340401436 342022.1567141769 314604.90562010516 649891.748357718 446475.8768680458 391217.191393841 239556.14319744808 209557.77449523093 197018.96384849996 1.3968560177787182 2.044049544965062 1.7359859682196828 1.5968255008285612 3.2986253488646904 2.2661568619930854 1.9856829198161454 1.2159039846623982 1.0636426585634307 1.0 17.587974975861798 -7.286591657107699 3.4036785784769337 1.0604577217273483 2.0818931839570904 0.4511718808195212 0.4842558636242143 0.24498310256446976 5.946923423924594 0.30857077559651847 0.14238323651527196 5.169021551402123e-08 7.286591657107699 1.0214354622297421 WGPRPGS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 2 WGPRPGSSR 9 1 P48634;P48634-2;P48634-3 P48634 PRRC2A Protein PRRC2A 1 WGPRPGS(0.977)S(0.023)R;WGPRPGS(0.885)S(0.115)R 73.435 0.018362 215200000.0 327270.0 314040.0 288960.0 310450.0 292110.0 276300.0 308790.0 314360.0 360860.0 288320.0 True False 309115.6807034292 298953.04701634985 307586.8239523471 339955.074659804 315097.39512145345 274575.5092117192 340005.5066999833 313269.5585321758 295336.9205403207 285765.7091095658 1.0817101942238658 1.0461473769819172 1.0763601585045839 1.189628649704298 1.1026424272642226 0.9608413482054414 1.189805130081655 1.0962461504157053 1.0334932118362918 1.0 18.124473282873165 -9.978249599403714 7.040801022062315 0.9999999943694494 1.088008681847405 0.13710793105841246 0.06484005878874159 5.742282908695201e-09 9.338670951450598e-10 0.06303604685389672 0.015288485998356588 1.0513574599301728e-10 9.978249599403714 0.08800868747795565 WGQPPS(ph)PTPVPRPPDADPNT(ph)PS(ph)PKPLEGRPER ddPTM_KYSE-520_SHP099_60min_R1 6 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 3 WGQPPS(0.758)PT(0.242)PVPRPPDADPNT(1)PS(1)PKPLEGRPER;WGQPPS(0.939)PT(0.086)PVPRPPDADPNT(0.981)PS(0.994)PKPLEGRPER;WGQPPS(0.988)PT(0.012)PVPRPPDADPNT(1)PS(1)PKPLEGRPER;WGQPPS(0.914)PT(0.125)PVPRPPDADPNT(0.964)PS(0.997)PKPLEGRPER;WGQPPS(0.909)PT(0.091)PVPRPPDADPNT(1)PS(1)PKPLEGRPER;WGQPPS(0.996)PT(0.004)PVPRPPDADPNT(1)PS(1)PKPLEGRPER 157.09 8.3452e-08 10852100000.0 3259680.0 3150040.0 2475230.0 2568680.0 2406870.0 2524580.0 2456960.0 2843020.0 3288440.0 2780070.0 True False 3078859.0523890187 2998707.3500935673 2634787.286308031 2812806.5748981945 2596276.975783002 2508823.1597746005 2705333.4944188306 2833158.2271858575 2691342.1908263946 2755440.7426617346 1.117374438404676 1.0882859150862518 0.9562126470420289 1.0208191130182118 0.9422365487980041 0.9104979544401658 0.9818151602873881 1.0282051010282474 0.97673745951313 1.0 21.393851670841425 -4.692268725080926 5.095778413196736 0.9761800228852524 1.108994144662155 0.6907384305710081 0.03377547493683211 0.11339345964212423 5.427337040918032 0.00933250885492486 0.025594773122753427 2.0310998538855324e-05 4.692268725080926 0.13281412177690255 WGQPPS(ph)PTPVPRPPDADPNT(ph)PSPK ddPTM_KYSE-520_SHP099_60min_R1 1 WGQPPSPTPVPRPPDADPNTPSPK 24 1 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 WGQPPS(0.999)PT(0.001)PVPRPPDADPNT(0.73)PS(0.27)PK 149.49 5.481e-07 989700000.0 975160.0 830090.0 735070.0 902800.0 939640.0 859790.0 909470.0 996880.0 999320.0 860410.0 True False 921065.9308667337 790211.2304095078 782453.7883535849 988601.8405632827 1013584.3221797359 854423.7316870925 1001408.1031718443 993422.0559535399 817868.678807165 852787.4367888505 1.0800650796815021 0.9266215663132048 0.9175249946222178 1.1592593862379563 1.1885544726085107 1.0019187605582036 1.1742763319105887 1.1649116920556963 0.9590533860194151 1.0 19.701826658997398 -5.26044895097184 24.988680447124715 1.1030659730135923 0.9699256480071696 0.26707183719103267 0.08815131585628735 105.29467542960269 2656567.67176873 0.023967790438675873 0.03867905929467261 5.489730807079144e-06 5.26044895097184 -0.1331403250064227 WGQPPS(ph)PTPVPRPPDADPNT(ph)PSPKPLEGRPER ddPTM_KYSE-520_SHP099_60min_R1 2 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 WGQPPS(0.946)PT(0.054)PVPRPPDADPNT(0.901)PS(0.099)PKPLEGRPER;WGQPPS(0.964)PT(0.036)PVPRPPDADPNT(0.56)PS(0.44)PKPLEGRPER 181.61 2.0828e-11 18152900000.0 8169200.0 7565300.0 7223300.0 7014600.0 6821900.0 6553900.0 5889400.0 6780900.0 8102900.0 7087100.0 True False 7716038.191103532 7201851.6322531905 7688925.47568864 7681265.4749836065 7358744.718698588 6512994.679054228 6484758.027005029 6757378.640573955 6631617.617486468 7024313.807680371 1.0984757233748341 1.0252747569988545 1.0946158850821248 1.09352538700434 1.0476104741579955 0.9272072486187807 0.9231874037168737 0.9619983994999555 0.9440947256991096 1.0 22.743925867311255 -6.156423581545199 4.342157122327905 0.9473482021225961 1.0747471020917252 0.8229425058927764 0.02814063282369388 0.0908090006796819 2.89039529299257 0.009383191226943378 0.009380483031493426 6.975517272819403e-07 6.156423581545199 0.12739889996912912 WGQPPS(ph)PTPVPRPPDADPNTPS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 WGQPPSPTPVPRPPDADPNTPSPK 24 1 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 WGQPPS(0.927)PT(0.073)PVPRPPDADPNT(0.144)PS(0.856)PK;WGQPPS(0.943)PT(0.057)PVPRPPDADPNT(0.199)PS(0.801)PK 164.65 1.9014e-10 1444630000.0 2134430.0 2055440.0 1826170.0 2083980.0 1948810.0 2115930.0 2170690.0 2266420.0 2475700.0 2139360.0 True False 2016028.9130192848 1956693.5771216594 1943887.8401753088 2282040.8326285677 2102170.259787886 2102723.696005621 2390124.529092869 2258558.318006407 2026175.2873182707 2120406.9347968926 0.9507745329140768 0.9227915382709712 0.9167522555577323 1.0762277726879617 0.9913994456867057 0.9916604504064379 1.1272008640746176 1.0651532406079154 0.9555596400236975 1.0 21.015909733393435 -5.250800655687988 24.620365682221315 1.033209093610254 0.9293746414564853 0.47392315292928644 0.047929872639857304 507.01959278842253 1173353.0001390195 0.013428724065405035 0.022933362931416627 5.613055602281194e-06 5.250800655687988 -0.10383445215376874 WGQPPS(ph)PTPVPRPPDADPNTPS(ph)PKPLEGRPER ddPTM_KYSE-520_SHP099_60min_R1 4 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 WGQPPS(0.985)PT(0.015)PVPRPPDADPNT(0.049)PS(0.951)PKPLEGRPER;WGQPPS(0.988)PT(0.012)PVPRPPDADPNT(0.228)PS(0.772)PKPLEGRPER;WGQPPS(0.996)PT(0.004)PVPRPPDADPNT(0.276)PS(0.724)PKPLEGRPER;WGQPPS(0.858)PT(0.133)PVPRPPDADPNT(0.115)PS(0.893)PKPLEGRPER 147.0 2.6233999999999997e-06 19091200000.0 6794350.0 6129840.0 5799270.0 4909690.0 5274960.0 5687300.0 4957350.0 5683090.0 6416680.0 5203250.0 True False 6417453.861299071 5835353.285322579 6173100.22336007 5376305.461447881 5690069.341583172 5651803.451103175 5458487.317073621 5663376.687233175 5251572.663339425 5157153.253067245 1.2443791266979038 1.1315066663671418 1.196997630366828 1.0424948023893403 1.1033353213226642 1.0959153575166172 1.0584303101380894 1.098159470802007 1.0183084359992645 1.0 22.2981434874917 -1.0000000000000129 0.24076486063699684 1.020899767796695 2.2537025866022353 0.7241148254164236 0.038229653040868755 26.890861415133884 0.35965409511718405 0.050098136550250943 13.264329739708437 0.09999999999999704 1.0000000000000129 1.2328028188055404 WGQPPS(ph)PTPVPRPPDADPNTPSPK ddPTM_KYSE-520_SHP099_60min_R1 3 WGQPPSPTPVPRPPDADPNTPSPK 24 1 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 WGQPPS(0.5)PT(0.5)PVPRPPDADPNTPSPK;WGQPPS(0.5)PT(0.5)PVPRPPDADPNTPSPK;WGQPPS(0.44)PT(0.44)PVPRPPDADPNT(0.106)PS(0.014)PK 225.17 1.4555e-21 6770600000.0 6271200.0 6089900.0 4722560.0 4591750.0 4863270.0 6511100.0 5070400.0 6935600.0 6460200.0 6816500.0 True False 5923324.034672731 5797332.062873739 5026983.773963159 5028148.53944002 5245981.680778856 6470461.809730082 5582965.514335301 6911542.022381213 5287190.5283893505 6756111.11315676 0.8767357338362493 0.8580871400389037 0.7440646978368485 0.7442370996013181 0.7764794854487964 0.9577198630036725 0.8263578589557399 1.023005972906776 0.7825789777336768 1.0 22.687761624681063 -6.254278957427065 24.870633377572933 0.9136469911168699 0.7969556301204319 0.3577737428714787 0.07890168651514683 604.0117440515319 2097943.8591175876 0.025653353255554456 0.025141927966217153 5.568279705083545e-07 6.254278957427065 -0.11669136099643795 WGQPPS(ph)PTPVPRPPDADPNTPSPKPLEGRPER ddPTM_KYSE-520_SHP099_60min_R1 6 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 WGQPPS(0.893)PT(0.071)PVPRPPDADPNT(0.02)PS(0.016)PKPLEGRPER;WGQPPS(0.834)PT(0.166)PVPRPPDADPNTPSPKPLEGRPER;WGQPPS(0.499)PT(0.499)PVPRPPDADPNT(0.002)PSPKPLEGRPER;WGQPPS(0.901)PT(0.099)PVPRPPDADPNTPSPKPLEGRPER;WGQPPS(0.857)PT(0.14)PVPRPPDADPNTPS(0.004)PKPLEGRPER;WGQPPS(0.867)PT(0.122)PVPRPPDADPNT(0.007)PS(0.005)PKPLEGRPER 182.37 1.3613e-11 59546500000.0 6571380.0 6604890.0 5713330.0 5715570.0 6007280.0 5349580.0 5311260.0 5786270.0 6970440.0 5900850.0 True False 6206852.451678737 6287581.170257985 6081620.393451207 6258776.0543512115 6480018.75925235 5316191.286894053 5848173.993702363 5766198.779895567 5704783.806493031 5848573.059791825 1.0612592829437382 1.0750624307806433 1.0398468705574617 1.0701372779934097 1.1079657709675599 0.9089723651470089 0.9999317669309451 0.985915491000263 0.9754146435671076 1.0 22.479653246896124 -6.251164392829564 24.999956424438018 0.9747843771729655 1.0693256380718286 0.7409926135958185 0.028608456425513365 361.74130701952527 880149.3431579613 0.009360087796878587 0.009262781314453614 5.608356435850725e-07 6.251164392829564 0.09454126089886306 WGQPPSPT(ph)PVPRPPDADPNT(ph)PSPKPLEGRPER ddPTM_KYSE-520_SHP099_60min_R1 1 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 WGQPPS(0.125)PT(0.875)PVPRPPDADPNT(0.888)PS(0.112)PKPLEGRPER 124.11 7.0769e-05 4947200000.0 332390.0 271400.0 262180.0 231490.0 271440.0 217300.0 228830.0 267810.0 284400.0 264810.0 True False 313951.6640969625 258361.53662029462 279080.5423028318 253490.7399999939 292800.78371766524 215943.7500966575 251962.36956558592 266881.02961732366 232760.12914057303 262463.98941906256 1.1961704338635661 0.9843694641392584 1.0633098388870346 0.9658115026029664 1.1155845964459739 0.8227557257459475 0.9599883402034659 1.016829128476016 0.886826911591811 1.0 18.001759970166606 -1.0000000004022045 0.5705506625795375 0.9584019234650306 11.776422489080902 0.41074784364409345 0.07804104609413613 151.95106996823571 1.3040143367857053 0.0360890017648807 2029.4789291396057 0.09999999990738899 1.0000000004022045 10.818020565615871 WGQPPSPT(ph)PVPRPPDADPNTPSPK ddPTM_KYSE-520_SHP099_60min_R1 1 WGQPPSPTPVPRPPDADPNTPSPK 24 1 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 WGQPPS(0.024)PT(0.394)PVPRPPDADPNT(0.358)PS(0.224)PK 102.9 0.0044104 3254800000.0 517230.0 646410.0 410750.0 413490.0 502410.0 556450.0 425040.0 591220.0 633360.0 608080.0 True False 488538.22082755796 615355.4933188092 437227.60222323716 452787.9652796983 541946.8086781324 552976.989145353 468007.1911906507 589169.1958117858 518357.7897063065 602692.8842790808 0.8105923158723362 1.0210100523334948 0.725456718717084 0.7512747820497445 0.899208905255932 0.9175103996902234 0.7765268238573345 0.9775612275836447 0.8600695366203753 1.0 19.20106350608518 -8.167931486373208 0.5967720150221612 1.000382912834423 0.8436136565152397 0.2022384269573666 0.0900219653746826 1.78799872771291 1.4194778355932323 0.09992560834794949 0.040880540535658476 6.793107911857477e-09 8.167931486373208 -0.15676925631918337 WGQPPSPT(ph)PVPRPPDADPNTPSPKPLEGRPER ddPTM_KYSE-520_SHP099_60min_R1 1 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 WGQPPS(0.137)PT(0.474)PVPRPPDADPNT(0.195)PS(0.195)PKPLEGRPER 141.94 1.2363e-06 3463500000.0 1112000.0 954730.0 898160.0 881540.0 849880.0 884720.0 885630.0 967360.0 1156300.0 918250.0 True False 1050315.143282957 908863.3377210539 956056.8307068105 965321.296555334 916760.7208442737 879198.134309779 975158.1233158663 964004.4539435223 946345.0679509303 910115.0193876898 1.1540465995051827 0.9986246994720755 1.0504791266383338 1.0606585717097452 1.0073020456920434 0.9660296946876988 1.0714669053280061 1.0592116747969818 1.039808208623582 1.0 19.79568935756601 -4.252237171583881 24.91184613080419 1.030496587493498 1.154046667241786 0.5741828730815939 0.032463370421231395 935.4509857988968 2532361.6457552603 0.008409029594724643 0.10410628016780657 5.594519969829299e-05 4.252237171583881 0.12355007974828802 WGQPPSPTPVPRPPDADPNTPS(ph)PKPLEGRPER ddPTM_KYSE-520_SHP099_60min_R1 1 WGQPPSPTPVPRPPDADPNTPSPKPLEGRPER 32 3 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y5Z7;A0A2R8Y685;A0A2R8Y8B3 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 1 WGQPPS(0.023)PT(0.009)PVPRPPDADPNT(0.189)PS(0.779)PKPLEGRPER 101.75 0.0015225999999999998 5096900000.0 996630.0 903530.0 902550.0 726290.0 681580.0 773490.0 835430.0 794000.0 992080.0 885970.0 True False 941344.9471673515 860123.0625738201 960729.8171310591 795316.3832329485 735216.4683402827 768662.3619984534 919883.4174110783 791245.7993209938 811943.2803016166 878120.9950742299 1.071999135025552 0.9795040403300136 1.0940745324621763 0.9057025030653302 0.837261006700031 0.8753490308399656 1.04755884732413 0.9010669415256467 0.9246371341263523 1.0 19.744060214843106 -5.272302693938321 24.772800556170747 0.922331754750157 1.0416237170577003 0.43622825887710537 0.06278952270868096 599.3413660825997 1366742.3620585417 0.01814213959960592 0.02720598160833704 5.3419190931475135e-06 5.272302693938321 0.11929196230754324 WGRDDIENIAR ddPTM_KYSE-520_SHP099_60min_R1 3 WGRDDIENIAR 11 1 O60264 O60264 SMARCA5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 0 ;; 199.12 4.4103e-07 1022000000.0 786230.0 784590.0 579590.0 447500.0 721300.0 740080.0 583410.0 627860.0 637780.0 653210.0 False True 742616.2545893525 746897.1187063995 616951.2987767888 490030.2654542188 778062.206364398 735460.8862012629 642386.7763329044 625682.1002036249 521975.22912543814 647423.0675896894 1.1470339747918787 1.1536461335661778 0.9529337610314923 0.756893428710483 1.201783262467105 1.1359818996554019 0.9922210197490572 0.9664192265082482 0.8062351424528559 1.0 19.304349243914036 -7.278735738724314 2.69602764479806 0.9039121887304619 1.0498189978494379 0.17391158854907407 0.1295620366228125 0.5442873208679259 7.7495862007149166 0.08891269518221742 0.03895690722433007 5.2633743691943565e-08 7.278735738724314 0.14590680911897602 WGTDEDKFTEILCLR ddPTM_KYSE-520_SHP099_60min_R1 3 WGTDEDKFTEILCLR 15 1 P12429;D6RA82;D6RFJ9 P12429 ANXA3 Annexin A3;Annexin 0 ;; 203.04 1.3709000000000001e-11 1916449000.0 1484130.0 1318100.0 837162.0 1095776.0 1481500.0 1321870.0 1007388.0 1057146.0 1063037.0 866105.0 False True 1401802.3503601938 1254776.4974915648 891126.8020265592 1199918.2215829326 1598085.6214180735 1313619.7190072185 1109224.6101994335 1053479.0072657317 870016.2777820226 858431.9835194931 1.6329801047404262 1.4617075337140808 1.0380866733005687 1.3978023240273236 1.8616333642020975 1.530254864947479 1.2921520067923302 1.2272131368481443 1.0134947141822872 1.0 19.711344303566385 -7.371313494536509 1.6550865054699142 1.0062157203580209 1.4725904489672625 0.47192673228193216 0.1977269813548225 0.40537302457069135 1.9794069373628194 0.18192343318747553 0.06523153818669099 4.2529130669114535e-08 7.371313494536509 0.4663747286092417 WGTDEEK ddPTM_KYSE-520_SHP099_60min_R1 4 WGTDEEK 7 0 P08758;D6RBE9;D6RBL5 P08758 ANXA5 Annexin A5;Annexin 0 ;;; 147.69 0.010759000000000001 1676680000.0 2739630.0 2852870.0 1892220.0 1644920.0 2498200.0 2855380.0 2076190.0 2295490.0 2386840.0 2384950.0 False True 2587657.2625829964 2715813.842954831 2014195.5288590475 1801252.7022367667 2694794.1271863845 2837558.514270571 2286071.546861745 2287527.480961392 1953450.0233399617 2363821.198463025 1.0946924683920727 1.148908320443473 0.8520930137053907 0.7620088623487915 1.1400160591412585 1.2004116538575649 0.9671084887250214 0.9677244126792501 0.8263950017074515 1.0 21.17268948223113 -4.736942901904231 24.99149358996498 0.9708764737790184 1.121800531057817 0.19489733984531432 0.12737610525786822 429.4205068423951 438091.32418000203 0.035536058455720845 0.09392646298203378 1.8325553384926497e-05 4.736942901904231 0.15092405727879854 WGTDEEKFITIFGTR ddPTM_KYSE-520_SHP099_60min_R1 2 WGTDEEKFITIFGTR 15 1 P08758;D6RBE9;D6RBL5 P08758 ANXA5 Annexin A5;Annexin 0 ; 155.1 2.5154e-06 645350000.0 502750.0 492080.0 326740.0 271744.0 414640.0 339710.0 216827.0 216349.0 342000.0 228612.0 False True 474861.45529272256 468439.7381728619 347802.18320248387 297570.4680571869 447269.80902112037 337589.74388097384 238745.98918759418 215598.53581523636 279901.42111841094 226586.67553744485 2.0957165913061324 2.067375484731225 1.5349630880877079 1.3132743456841598 1.9739457669354712 1.4898923031561273 1.0536629685806036 0.9515057992878639 1.235295148995447 1.0 17.789703500196964 -4.185966729982184 0.260920878506433 0.8980299927381252 3.1708922612217125 0.6927507597347393 0.23185765798405666 6.034691979196749 0.3364936434890033 0.3491162098075415 4.471669712481464 6.51678315300032e-05 4.185966729982184 2.2728622684835873 WHHEEEK ddPTM_KYSE-520_SHP099_60min_R1 3 WHHEEEK 7 0 A0A0A0MRK1;E9PAV9;Q5T3I0;Q5T3I0-3 A0A0A0MRK1 GPATCH4 G patch domain-containing protein 4 0 ;; 143.0 0.0017578 1372550000.0 947120.0 1135090.0 805270.0 827750.0 1201490.0 1228070.0 956340.0 1108540.0 1044650.0 702580.0 False True 894581.3655630887 1080558.572595174 857178.9926775551 906419.1111278881 1296040.4274570371 1220405.1596005643 1053016.1801789638 1104694.733475181 854967.893483472 696355.6877989687 1.284661533232634 1.551733677957867 1.2309499408081441 1.3016611007987668 1.8611759050228245 1.7525600508240318 1.5121814880371303 1.5863943568363528 1.2277746968447152 1.0 19.4094648752623 -7.964501538950839 3.7217238357964595 1.0020801885323807 1.5143486655729015 0.43070388708501073 0.19072897923890056 0.1962576115114982 6.147841783507098 0.19922837893397682 0.05263939550215067 1.0851717042492145e-08 7.964501538950839 0.5122684770405208 WHLVYR ddPTM_KYSE-520_SHP099_60min_R1 3 WHLVYR 6 0 Q99829;Q5JX61;F2Z2V0;A6PVH9;E7ENH5;Q5JX45;Q5JX52;Q5JX44;Q5JX60;Q5JX59;Q5JX58;B0QZ18 Q99829 CPNE1 Copine-1 0 ;; 159.55 0.011111 1133410000.0 1057790.0 1152970.0 820761.0 742958.0 1345710.0 1206920.0 904855.0 808860.0 770291.0 677806.0 False True 999112.2800479125 1097579.5905567468 873668.5673240318 813568.5049415318 1451609.720957486 1199387.1645957588 996326.5739337855 806054.2534493441 630425.571855912 671801.1661650891 1.4872142686968626 1.633786372867097 1.3004868275404804 1.2110257408240412 2.1607728507585917 1.7853305784542508 1.483067645775636 1.1998405094332085 0.9384109519407868 1.0 19.35767477435446 -7.372244690631259 2.4432043499321643 0.9796004663643962 1.5937611458211502 0.5100833644318932 0.24758137465702437 0.27873339534134683 3.130856310813035 0.19583648226444822 0.0757320894304988 4.243803917506492e-08 7.372244690631259 0.614160679456754 WHPDKNPENK ddPTM_KYSE-520_SHP099_60min_R1 1 WHPDKNPENK 10 1 E9PH18;A0A0J9YX62;O75190-3;O75190;C9JN01;C9JB42;C9JDR7;C9JDX6;F8WCZ4;C9J2P2;C9J2C4;Q8WWF6;O75190-2;Q7Z6W7 E9PH18 DNAJB6;DNAJB3;DNAJB7 DnaJ homolog subfamily B member 6;DnaJ homolog subfamily B member 3;DnaJ homolog subfamily B member 7 0 77.062 0.014563999999999999 401210000.0 323630.0 277870.0 219980.0 193670.0 297460.0 301120.0 246780.0 287460.0 327550.0 235160.0 False True 305677.5987595899 264520.7081086266 234160.2627804448 212076.33857099141 320868.40968411724 299240.5983852072 271726.93074070395 286462.8683536686 268075.1768635536 233076.66535171168 1.3114894976651725 1.1349085834459918 1.0046491030198068 0.9098994884407203 1.376664666108588 1.2838719737716104 1.165826404503725 1.2290499691223802 1.1501587962871758 1.0 17.830445049617886 -4.258386352376576 22.75525514303989 1.1479702623654475 1.3114897070449583 0.1280437019801982 0.13302346184557587 202.3201208901774 1507665.0041103 0.03537396596565385 0.2389679921134121 5.515865244925304e-05 4.258386352376576 0.16351944467951074 WHPDKNPENKEEAER ddPTM_KYSE-520_SHP099_60min_R1 1 WHPDKNPENKEEAER 15 2 E9PH18;A0A0J9YX62;O75190-3;O75190;C9JN01;C9JB42;C9JDR7;C9JDX6;F8WCZ4;C9J2P2;C9J2C4;Q8WWF6;O75190-2;Q7Z6W7 E9PH18 DNAJB6;DNAJB3;DNAJB7 DnaJ homolog subfamily B member 6;DnaJ homolog subfamily B member 3;DnaJ homolog subfamily B member 7 0 148.57 9.0921e-06 1251800000.0 1399900.0 1600700.0 993620.0 1008300.0 1355800.0 1210700.0 1128400.0 1319800.0 1436500.0 960660.0 False True 1322244.7563685365 1523799.9693003173 1057670.3350482103 1104128.5288435514 1462493.7465532378 1203143.5722136383 1242469.6841227415 1315221.9218436372 1175667.8112181188 952149.2997821699 1.3886947736778634 1.6003792363749343 1.1108240433408725 1.1596170149956009 1.5359920412563692 1.2636081048307133 1.3049105685494808 1.3813190033795437 1.2347515368515052 1.0 19.860828284490253 -12.934599132975352 0.22277311180546916 5.564239183138876e-12 1.3776109197215352 0.34138941987522053 0.14322404284839882 113.3721555185738 1.743624733934542 51.4399404986359 0.284085997145229 1.1625211611806396e-13 12.934599132975352 1.377610919715971 WHPHS(ph)PNVRPSFQDDR ddPTM_KYSE-520_SHP099_60min_R1 1 WHPHSPNVRPSFQDDR 16 1 Q9H329-2 Q9H329-2 EPB41L4B Band 4.1-like protein 4B 1 WHPHS(1)PNVRPSFQDDR 69.747 0.013461 416620000.0 233790.0 211980.0 272740.0 269770.0 207750.0 253880.0 250130.0 274640.0 275250.0 188850.0 True False 220821.2026511895 201796.16261153322 290321.2567994294 295408.85969069216 224098.74306419477 252295.44074799566 275415.5814335528 273687.3379414579 225271.53848784373 187176.93592307655 1.1797457927291832 1.0781037824791868 1.5510525127879096 1.5782332274746462 1.1972561788076916 1.3478981237927765 1.4714183672006436 1.4621851596819293 1.2035218835958656 1.0 17.51404315038716 -8.020412377528148 5.331311476376673 1.0001755566620694 1.359983075298183 0.3385377506805817 0.1567598769781794 0.19264675686245677 22.115672963507247 0.1615834217140803 0.04204512488523387 9.540862181397873e-09 8.020412377528148 0.3598075186361136 WHQPPPS(ph)PLPLR ddPTM_KYSE-520_SHP099_60min_R1 3 WHQPPPSPLPLR 12 0 Q68DK7;J3KSZ8;Q68DK7-2;J3KTC2;Q68DK7-3;J3QQY0 Q68DK7;J3QQY0 MSL1 Male-specific lethal 1 homolog 1 WHQPPPS(1)PLPLR;WHQPPPS(1)PLPLR;WHQPPPS(1)PLPLR 160.78 2.462e-06 3460690000.0 1698145.0 1817710.0 1710957.0 1832600.0 1675497.0 1784843.0 1617554.0 1890120.0 2055510.0 1983233.0 True False 1603945.5116818699 1730384.483161664 1821248.0258479905 2006769.7530087195 1807349.081626134 1773703.1327831077 1781072.1441257317 1883563.6148773232 1682281.1991903635 1965663.0985519276 0.8159819008982112 0.880305727078262 0.9265311167461375 1.020912360051463 0.919460248787078 0.9023434046708035 0.9060922725963665 0.9582331866864237 0.8558339424643384 1.0 20.906584643953565 -4.481807752203299 2.457944334608744 0.9347994469734756 0.8132949603117563 0.4114680360817591 0.04544105449839185 0.3601465880398533 3.634413545606269 0.012080117289598713 0.07466807320409433 3.297556517894675e-05 4.481807752203299 -0.12150448666171931 WHQVETT(ph)PLREEK ddPTM_KYSE-520_SHP099_60min_R1 2 WHQVETTPLREEK 13 1 A0A494BZV2;Q6WCQ1-2;J3KSW8;Q6WCQ1-3;H0Y2S9;Q6WCQ1 A0A494BZV2;Q6WCQ1 MPRIP Myosin phosphatase Rho-interacting protein 1 WHQVET(0.033)T(0.967)PLREEK;WHQVET(0.153)T(0.847)PLREEK 128.74 8.8853e-05 1207910000.0 782250.0 783280.0 670610.0 722530.0 663050.0 678830.0 562030.0 618680.0 852330.0 644110.0 True False 738857.0331232864 745650.0530727505 713838.5936139368 791199.033963434 715228.2627615602 674593.1701707974 618845.4772842113 616533.9434809969 697568.3574908044 638403.6865099965 1.1573508247774145 1.1679914587414817 1.1181617661331582 1.23933970101071 1.1203385536063326 1.0566874603413403 0.9693638842646644 0.965743081546793 1.092675954464247 1.0 19.284109456971905 -6.287613560199073 2.577248915610422 1.0054258804831093 1.1671082210799348 0.7358994606486119 0.04415690160794223 0.14457146446781838 1.9004829565370844 0.016613398759006373 0.015115704925960228 5.156873044824039e-07 6.287613560199073 0.1616823405968255 WHTVVFGHDGEK ddPTM_KYSE-520_SHP099_60min_R1 2 WHTVVFGHDGEK 12 0 A0A0A0MTS5;A0A0A6YYF2;A0A3B3ITG1;A0A0A0MSA0;Q16787-4;Q16787-1;Q16787-3;Q16787 A0A0A0MTS5 LAMA3 Laminin subunit alpha-3 0 ; 225.15 4.7676e-11 1991540000.0 2530700.0 2965500.0 1936020.0 2025310.0 3096800.0 2955700.0 2318900.0 2761100.0 2340400.0 2325830.0 False True 2390317.0261746203 2823032.928693753 2060818.9469415238 2217794.853468346 3340500.5416182806 2937252.3799387524 2553317.0422830763 2751522.3885455825 1915442.3566828335 2305224.955668358 1.0369126970871227 1.224623619379162 0.8939773716548313 0.9620730714436225 1.4490995915189384 1.2741716910170917 1.107621638402222 1.1936025513604718 0.8309134221252111 1.0 21.136476112426244 -7.756005688179211 24.99123113990415 0.9154566866427 1.1445938015491857 0.2547941045665305 0.15546723374554713 176.0730927981243 809843.1420261502 0.11884965871670441 0.04201438071152277 1.7538575305131052e-08 7.756005688179211 0.2291371149064857 WIDFVR ddPTM_KYSE-520_SHP099_60min_R1 2 WIDFVR 6 0 P05455 P05455 SSB Lupus La protein 0 ; 140.72 0.052207 4820500000.0 5059200.0 4575200.0 3293800.0 3016300.0 4910400.0 4293000.0 3609200.0 3357100.0 3377000.0 3385600.0 False True 4778556.090734842 4355400.524484796 3506123.618266337 3302968.245116335 5296820.54364583 4266205.794592503 3974053.1583975493 3345455.00365303 2763821.9272423186 3355606.217956945 1.4240515067480886 1.2979474472235824 1.0448555016687966 0.9843134237387787 1.5784988462891782 1.2713666376473625 1.1843025969886136 0.9969748493581897 0.8236431058126561 1.0 21.678141994061015 -7.26935338652346 2.6414981255982855 0.9112936882276226 1.2575938957836352 0.4451783142359842 0.16426238419953867 0.2933973003732127 3.9991968907244106 0.11225535597122042 0.04938511015148535 5.378319691755905e-08 7.26935338652346 0.34630020755601265 WIDNPTVDDR ddPTM_KYSE-520_SHP099_60min_R1 1 WIDNPTVDDR 10 0 P18206-2;P18206 P18206-2 VCL Vinculin 0 135.43 0.0021557 394880000.0 249980.0 302620.0 256060.0 152670.0 292220.0 327120.0 253080.0 251550.0 279020.0 301830.0 False True 236113.1110772247 288081.68095811916 272566.0373104857 167179.71089809082 315216.05149563914 325078.32274099713 278663.7962227782 250677.4317622112 228357.00152180955 299156.02102018637 0.7892641113223401 0.9629813900308564 0.9111166687569147 0.5588378610197182 1.0536844634471492 1.0866514457319298 0.9314998751236052 0.8379488098128436 0.7633374743488801 1.0 18.190538574396246 -4.233214611096005 22.059152400381425 0.8968097712056267 0.78926339796811 0.049352318146026475 0.14580432511330568 7392.398003114431 5777090.438829442 0.03783723210347443 2.685743423727952 5.84501175484426e-05 4.233214611096005 -0.1075463732375167 WIGLDLSNGKPR ddPTM_KYSE-520_SHP099_60min_R1 2 WIGLDLSNGKPR 12 1 P17987;F5H282;E7EQR6 P17987 TCP1 T-complex protein 1 subunit alpha 0 ; 113.77 0.0016492999999999998 289240000.0 409450.0 389870.0 321970.0 274430.0 498460.0 449790.0 319170.0 327680.0 326770.0 327180.0 False True 386736.9922816607 371140.05999319983 342724.70137021464 300511.74468961195 537685.9661505581 446982.69376887084 351434.8183990212 326543.3545610868 267436.8052013539 324281.4397421883 1.1925967535765418 1.144499852622664 1.0568742436899539 0.9267004147031237 1.6580843065765083 1.378378898663559 1.0837339894581093 1.006975159665927 0.8247058648005656 1.0 18.306886927900056 -7.173225287445902 2.810324247745458 0.9264662002676046 1.2199433302008982 0.30488190590896325 0.1898793047001297 0.3841006892999441 5.8518133614307155 0.1191711221384404 0.058989759759948024 6.710806438863988e-08 7.173225287445902 0.29347712993329356 WIPGAADDSKLEVFTT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 WIPGAADDSKLEVFTTPK 18 1 Q8WYP5;Q8WYP5-3;Q8WYP5-2 Q8WYP5 AHCTF1 Protein ELYS 1 WIPGAADDSKLEVFT(0.151)T(0.849)PK 131.59 5.3312e-05 808200000.0 842220.0 937030.0 756870.0 524460.0 666850.0 783060.0 634570.0 647740.0 1032000.0 898870.0 True False 795500.3776760537 892013.6722892949 805659.0512348178 574304.5207153509 719327.3011425186 778172.6320786414 698718.5284063873 645493.1411236526 844614.8146029244 890906.711110278 0.8929109723336512 1.0012425107648335 0.9043135955624111 0.6446292451873363 0.8074103519167216 0.8734614100154846 0.7842779941971935 0.7245350529677986 0.9480395692051045 1.0 19.764914846178616 -5.013099729734509 24.78573435790401 0.8109880176447747 0.948502100863487 0.19047972145837233 0.1000795122593967 704.5333499434189 1333041.3661528958 0.025703887528001974 0.04738574606418577 9.702871286114291e-06 5.013099729734509 0.13751408321871228 WIS(ph)ENQDSADVDPQEHSFTR ddPTM_KYSE-520_SHP099_60min_R1 1 WISENQDSADVDPQEHSFTR 20 0 Q15751 Q15751 HERC1 Probable E3 ubiquitin-protein ligase HERC1 1 WIS(1)ENQDSADVDPQEHSFTR 131.32 9.6983e-06 292280000.0 13375.0 19827.0 16426.0 18099.0 13074.0 18600.0 21533.0 17594.0 30067.0 21964.0 True False 12633.062087598517 18874.481159066258 17484.846242529256 19819.123518337226 14102.84941911568 18483.910500680322 23709.765781828253 17532.97052047048 24607.590727389634 21769.41604773341 0.5803124006587144 0.867018257066727 0.8031839808743857 0.9104113530137964 0.6478285585700881 0.8490770014294816 1.0891319146935439 0.8053946179367535 1.1303744056998593 1.0 14.410015088116527 -6.564845966260892 7.080073543073802 0.9883686953547131 0.7751832099938651 0.4734773398324268 0.12069744503354181 0.19842601845582644 26.036975143353345 0.0440655337001149 0.0342077233380669 2.723667155590583e-07 6.564845966260892 -0.21318548536084792 WIS(ph)IMTER ddPTM_KYSE-520_SHP099_60min_R1 4 WISIMTER 8 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 1 WIS(0.999)IMT(0.001)ER;WIS(0.998)IMT(0.002)ER;WIS(1)IMTER;WIS(1)IMTER 142.98 0.00056678 133942000.0 144236.0 160998.0 145813.0 140660.0 160395.0 162794.0 149383.0 160489.0 196566.0 175508.0 True False 136234.9415526626 153263.41441707508 155212.33928904898 154028.28410902896 173017.17397728766 161777.94226063183 164484.09147758555 159932.30111741435 160874.56942561833 173953.13566315774 0.7831703696130404 0.8810615217299321 0.8922652569459951 0.8854585088209551 0.9946194606823158 0.9300087730174528 0.9455655447113755 0.9193987823657672 0.9248155764040684 1.0 17.408339159516572 -2.795401129470981 0.5810170383845553 0.9470738177234003 1.4245074013558281e-11 0.7241501472239127 0.030963524688865283 9.63248258463037 0.6502023045628851 0.014625372959220222 8.928422067257022 0.0016017652612047993 2.795401129470981 -0.9470738177091552 WISIMTER ddPTM_KYSE-520_SHP099_60min_R1 4 WISIMTER 8 0 P07355;P07355-2;H0YN42;A6NMY6;H0YMU9;H0YMD0;H0YM50;H0YN28;H0YNP5;H0YL33 P07355 ANXA2;ANXA2P2 Annexin A2;Annexin;Putative annexin A2-like protein 0 ;;; 162.5 0.00050754 9179930000.0 2791750.0 2917590.0 1987730.0 1671230.0 3010970.0 2969730.0 2211000.0 2468510.0 2508160.0 2572590.0 False True 2636886.062284349 2777424.5970081277 2115862.2562804483 1830063.196726379 3247916.2089241785 2951194.8135045874 2434509.4572805576 2459947.314964567 2052741.3695682818 2549798.8540447345 1.03415454050482 1.0892720390874409 0.8298153608956509 0.7177284568244895 1.273793108727782 1.1574225977955557 0.9547849052558425 0.9647613226676149 0.8050601192764784 1.0 21.28195201102868 -7.326428600340005 2.862318091124399 0.9032336834676782 1.0105458018503626 0.06604444600899151 0.15456828024917826 0.867705346483766 13.786520426920779 0.10942930168131496 0.046349560927318935 4.7159739736426385e-08 7.326428600340005 0.1073121183826844 WIYEDVER ddPTM_KYSE-520_SHP099_60min_R1 2 WIYEDVER 8 0 O43852;O43852-3;O43852-5;O43852-6;O43852-10;O43852-13;O43852-14;O43852-11 O43852 CALU Calumenin 0 ; 100.19 0.020281 1775280000.0 745890.0 829340.0 572110.0 491740.0 814480.0 792230.0 596220.0 571290.0 631600.0 645170.0 False True 704513.9948051493 789497.2615352819 608989.1260083648 538474.8217529785 878574.9422427203 787285.3987072023 656491.7361464556 569308.3283300888 516917.361340316 639454.2957346652 1.1017425318814027 1.2346422047696672 0.9523575493518279 0.8420849235742923 1.3739448590822754 1.2311832197525465 1.026643718754311 0.8903033917005965 0.808372646471055 1.0 19.286481722248514 -7.10521688233502 3.7021152131089092 0.8882291531403598 1.1193207707186588 0.313460603392437 0.14684351117183622 0.3139978268805932 7.750828281378747 0.07985012780328449 0.044136863281157 7.848435936605483e-08 7.10521688233502 0.231091617578299 WKDSDEADLVLAK ddPTM_KYSE-520_SHP099_60min_R1 7 WKDSDEADLVLAK 13 1 Q13185 Q13185 CBX3 Chromobox protein homolog 3 0 ;;;;;; 163.99 1.0383e-06 4451760000.0 8653000.0 8104120.0 4934678.0 4520580.0 7751820.0 7315760.0 5635900.0 6168130.0 6334820.0 6061470.0 False True 8173000.840672159 7714785.910667879 5252775.239643967 4950214.564038058 8361844.132177557 7270099.628196615 6205631.773083437 6146734.196682364 5184576.375816756 6007770.0915523 1.360405061466059 1.2841346777760125 0.8743302689012761 0.8239687086226382 1.3918382369417546 1.2101161524838164 1.0329342965053465 1.0231307295406435 0.8629784923206264 1.0 22.518398173434036 -4.618076222007806 6.7967526595579075 1.0412489559935134 1.3413475298560966 0.3488984206649859 0.16155581712202977 0.2402813727701593 14.1621516618711 0.04457641408931286 0.1201805870522513 2.40948250894047e-05 4.618076222007806 0.3000985738625832 WKEEKGDR ddPTM_KYSE-520_SHP099_60min_R1 1 WKEEKGDR 8 2 A0A140T936;P26640-2;P26640 A0A140T936 VARS Valine--tRNA ligase 0 104.22 0.0013249 483980000.0 1036300.0 1269300.0 852300.0 673960.0 1039400.0 1118600.0 641080.0 797690.0 1191900.0 638180.0 False True 978814.3731871673 1208320.9227418578 907240.6217282162 738012.9557665375 1121194.8666229788 1111618.4024763969 705886.6227378643 794922.9995722458 975481.0053538996 632526.2216965272 1.5474684520775202 1.9103096145183762 1.434313061828275 1.166770531326084 1.7725666196347898 1.7574265925211368 1.1159800155708546 1.2567431551535473 1.5421985237821727 1.0 19.27076576314084 -10.80956082243227 0.08637151143012006 4.1986276883443755e-11 2.0804375369055985 0.3344176680454187 0.2392944855194767 118.89680895752106 1.5322802613567867 33.44745604917261 9.039776950427433 1.5503836421804522e-11 10.80956082243227 2.080437536863612 WKEPGSGGPQNLS(ph)GPGGR ddPTM_KYSE-520_SHP099_60min_R1 4 WKEPGSGGPQNLSGPGGR 18 1 Q9H0W8-2;Q9H0W8;M0QYR7;M0R2N0;M0QZC7;M0QZH1;M0QX70 Q9H0W8-2 SMG9 Protein SMG9 1 WKEPGSGGPQNLS(1)GPGGR;WKEPGSGGPQNLS(1)GPGGR;WKEPGSGGPQNLS(1)GPGGR;WKEPGSGGPQNLS(1)GPGGR 275.2 1.744e-30 11001800000.0 3722200.0 3524100.0 3443360.0 3149060.0 3318560.0 3539410.0 2879050.0 3140080.0 3848110.0 3253890.0 True False 3515722.145978262 3354796.9462180575 3665324.4951707977 3448345.7156005837 3579711.7919764826 3517319.229312524 3170092.4708202607 3129187.795380178 3149390.226958969 3225063.0660881163 1.0901250840476446 1.040226773080535 1.1365125022552511 1.0692335761927598 1.1099664467394563 1.0906202940021585 0.98295518749823 0.970271815234847 0.9765360126055037 1.0 21.620895942028426 -6.76590093479356 8.370204150635987 0.9797500096232439 1.0894474192621466 0.8209753828170278 0.024468167002228317 0.04650905115947633 28.20284886991972 0.009620557732199934 0.0068683953468028905 1.7143483161638738e-07 6.76590093479356 0.10969740963890273 WKES(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 WKESPR 6 1 Q96CN4;Q96CN4-2 Q96CN4 EVI5L EVI5-like protein 1 WKES(1)PR 58.815 0.041043 761190000.0 1440100.0 1335000.0 1126300.0 1236600.0 1266800.0 1324800.0 1171500.0 1273100.0 1568500.0 1197000.0 True False 1360214.7822318217 1270864.5961241454 1198903.100143718 1354126.0922026546 1366489.9528939687 1316531.431790393 1289926.652738204 1268683.9132437732 1283699.9386673302 1186395.5112519073 1.1465103916285868 1.0711980819811975 1.0105425119811964 1.1413783003728282 1.151799665401652 1.109690165972698 1.0872652842196349 1.069360007865365 1.082016853985519 1.0 20.17815361377785 -8.385601355816448 0.8570678455107659 1.0000828433321638 1.101274221519969 0.3631747630822687 0.040070154729167716 1.586264650525205 2.064774995430878 0.042908070433728934 0.014460725892415371 4.11527293693549e-09 8.385601355816448 0.1011913781878051 WKGPPGS(ph)ADK ddPTM_KYSE-520_SHP099_60min_R1 1 WKGPPGSADK 10 1 P42285;D6REC7 P42285 SKIV2L2 Superkiller viralicidic activity 2-like 2 1 WKGPPGS(1)ADK 84.46799999999999 0.0039614 0.0 258420.0 208310.0 235550.0 193060.0 216440.0 218900.0 192550.0 185810.0 248910.0 203520.0 True False 244084.9274525018 198302.4749203155 250733.92989332575 211408.3643543944 233472.59662485824 217533.76390316768 212014.8331069069 185165.46847838 203714.21851047827 201716.9711361639 1.2100366472771322 0.9830728361792448 1.2429986851432258 1.0480445108988306 1.157426642437827 1.078410818276302 1.0510510440085465 0.9179469007265074 1.0099012361878377 1.0 17.62197294234398 -6.880011438207155 2.2704002263781176 0.9734994148658955 1.1208294993242918 0.4299918172793209 0.0744658985694539 0.27610369595739637 2.883745319870719 0.03542570659743937 0.021186126772176572 1.3182220194988915e-07 6.880011438207155 0.14733008445839624 WKGYDS(ph)EDDTWEPEQHLVNCEEYIHDFNR ddPTM_KYSE-520_SHP099_60min_R1 8 WKGYDSEDDTWEPEQHLVNCEEYIHDFNR 29 1 Q9Y232-2;Q9Y232 Q9Y232-2 CDYL Chromodomain Y-like protein 1 WKGYDS(0.999)EDDT(0.001)WEPEQHLVNCEEYIHDFNR;WKGYDS(1)EDDTWEPEQHLVNCEEYIHDFNR;WKGYDS(1)EDDTWEPEQHLVNCEEYIHDFNR;WKGYDS(1)EDDTWEPEQHLVNCEEYIHDFNR;WKGYDS(1)EDDTWEPEQHLVNCEEYIHDFNR;WKGYDS(1)EDDTWEPEQHLVNCEEYIHDFNR;WKGYDS(1)EDDTWEPEQHLVNCEEYIHDFNR;WKGYDS(1)EDDTWEPEQHLVNCEEYIHDFNR 346.7 3.368399999999999e-79 10965060000.0 1980605.0 2141837.0 1752502.0 2000137.0 1968434.0 1764187.0 1657061.0 2019021.0 2317250.0 1569388.0 True False 1870736.8924118194 2038939.9355571205 1865471.0830223428 2190229.419116883 2123338.5569425994 1753176.05454106 1824572.8972368967 2012017.4873940456 1896495.8131188236 1555484.443285389 1.202671553860465 1.3108070250131267 1.1992862359216019 1.4080689964927122 1.3650657620579136 1.1270932744516042 1.1729933430791228 1.293498945668912 1.2192316170730537 1.0 20.56893253558364 -6.264996962912879 24.983047083997505 1.1815589897556513 1.2986589429944146 0.3369697232086596 0.09250397571004697 432.3314509131036 3036025.4004397583 0.03227219766045487 0.029603136704810247 5.43254130537604e-07 6.264996962912879 0.11709995323876332 WKGYT(ph)SDDDTWEPEIHLEDCK ddPTM_KYSE-520_SHP099_60min_R1 8 WKGYTSDDDTWEPEIHLEDCK 21 1 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 WKGY(0.285)T(0.365)S(0.337)DDDT(0.013)WEPEIHLEDCK;WKGY(0.289)T(0.328)S(0.328)DDDT(0.054)WEPEIHLEDCK;WKGY(0.001)T(0.495)S(0.495)DDDT(0.01)WEPEIHLEDCK;WKGYT(0.5)S(0.5)DDDTWEPEIHLEDCK;WKGYT(0.576)S(0.424)DDDTWEPEIHLEDCK;WKGYT(0.496)S(0.496)DDDT(0.008)WEPEIHLEDCK;WKGYT(0.5)S(0.5)DDDTWEPEIHLEDCK;WKGYT(0.484)S(0.484)DDDT(0.032)WEPEIHLEDCK 205.0 1.4835999999999999e-13 4635611000.0 2757148.0 3607666.0 2784026.0 2633482.0 2651392.0 2573552.0 2399848.0 2630278.0 3552430.0 2644836.0 True False 2604203.5042017237 3434348.3101429325 2963488.7705590962 2883767.3374947635 2860041.4660431324 2557489.507357358 2642448.056099428 2621154.1795295 2907398.261472735 2621404.810691271 0.993438134232686 1.3101174973571847 1.1304964263713306 1.1000847048626217 1.0910338816723741 0.9756179194173912 1.0080274688298172 0.9999043905158225 1.1090993079798488 1.0 21.321908728515467 -5.762768468448071 1.7479675554358491 1.019248119281034 1.15752878579229 0.31057761457231137 0.07989354114977769 0.38598659806517416 2.4385888112256864 0.027438050628741075 0.036413347061884836 1.7267582178864338e-06 5.762768468448071 0.13828066651125592 WKGYTS(ph)DDDTWEPEIHLEDCK ddPTM_KYSE-520_SHP099_60min_R1 1 WKGYTSDDDTWEPEIHLEDCK 21 1 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 WKGYT(0.18)S(0.82)DDDTWEPEIHLEDCK 253.21 2.4590999999999997e-27 2085900000.0 1356900.0 1634300.0 1376700.0 1113900.0 1315100.0 1195800.0 1224100.0 1350600.0 1747200.0 1272600.0 True False 1281630.0520869107 1555785.7748656885 1465444.2847978817 1219764.7210937531 1418590.8881045592 1188336.5686405136 1347843.9740647338 1345915.0838324085 1429952.5233277408 1261325.7540678189 1.01609758458797 1.2334527934978146 1.161828560204827 0.9670497230076925 1.1246824093851686 0.9421329619315925 1.068593081301869 1.0670638250997304 1.1336901024307915 1.0 20.2665094881987 -5.234674937537256 24.576570123137223 1.0463378505021281 1.146758983108769 0.23575028756627536 0.07668176182059577 814.6445392090156 748049.4474810115 0.01998772783495014 0.03460657831305866 5.825390758006936e-06 5.234674937537256 0.10042113260664087 WKGYTSDDDT(ph)WEPEIHLEDCK ddPTM_KYSE-520_SHP099_60min_R1 1 WKGYTSDDDTWEPEIHLEDCK 21 1 Q99549-2;Q99549 Q99549-2 MPHOSPH8 M-phase phosphoprotein 8 1 WKGYT(0.094)S(0.094)DDDT(0.812)WEPEIHLEDCK 166.06 1.1731000000000001e-08 1114000000.0 101030.0 164060.0 120330.0 112680.0 130630.0 121930.0 96751.0 126880.0 149160.0 129910.0 True False 95425.66450168822 156178.31134091955 128086.6643348074 123389.07332152259 140909.83781697106 121168.98964236304 106531.5352787657 126439.88289401465 122076.30401760862 128759.09846845047 0.7411178366169607 1.2129497115047567 0.9947775796689985 0.9582940140867507 1.094368005780173 0.9410518641682847 0.8273709318092878 0.9819879480205891 0.9480984681445302 1.0 16.97431485509408 -6.4895645070187715 24.15864158291495 0.9301987612082285 1.0102981505293573 0.05552521451526571 0.11915831916723538 1034.5728015106338 750246.9700154073 0.040081549111971974 0.03531989598052165 3.239183063361774e-07 6.4895645070187715 0.08009938932112881 WKPADLK ddPTM_KYSE-520_SHP099_60min_R1 1 WKPADLK 7 1 H7C126;B9A058;Q6NVY1 H7C126 HIBCH 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial 0 63.565 0.040331 310880000.0 696610.0 892310.0 422190.0 566030.0 976940.0 961020.0 712940.0 818290.0 875020.0 853570.0 False True 657967.6546423926 849442.0882153829 449405.0429278843 619825.3210168754 1053819.6199717666 955021.9177077321 785010.9328238805 815451.5429803224 716138.425459157 846008.0338674119 0.7777321589188486 1.0040591273492672 0.5312065901708872 0.7326470863207142 1.2456378400502557 1.1288567950613635 0.9279000924321116 0.9638815594369659 0.846491282340933 1.0 19.69031183797783 -5.725590412810139 24.999956254446552 1.0179472303506905 0.7622998074571752 0.42187715477719456 0.147602169779306 188.12150521107745 131189.26700502392 0.04614525794875607 0.05957124088116053 1.8810900541261145e-06 5.725590412810139 -0.2556474228935153 WKPPMIDNPSYQGIWKPR ddPTM_KYSE-520_SHP099_60min_R1 2 WKPPMIDNPSYQGIWKPR 18 2 P27824;P27824-2;P27824-3 P27824 CANX Calnexin 0 ; 101.78 0.00024582 156683000.0 137892.0 126551.0 118280.0 123572.0 179515.0 131549.0 125800.0 124092.0 145808.0 89331.0 False True 130242.85587911295 120471.3000030762 125904.51805469145 135316.2457267236 193641.8091993688 130727.95389537618 138517.0916896854 123661.55381529049 119332.94272056504 88539.59683846639 1.4710125246756083 1.3606488430579453 1.4220136814536717 1.5283133259980568 2.187064501238392 1.4764914068208281 1.56446490198503 1.3966807872516225 1.3477918014273176 1.0 16.43403518374568 -8.015786099014203 1.1580113738839513 1.0069637078997653 1.5781807359959266 0.39311206482508865 0.21781141901545445 0.5853930585013017 1.7627599418605053 0.2230518045302279 0.07081353931521428 9.643038506496436e-09 8.015786099014203 0.5712170280961613 WKS(ph)DVALNGR ddPTM_KYSE-520_SHP099_60min_R1 1 WKSDVALNGR 10 1 Q5T0Z8 Q5T0Z8 C6orf132 Uncharacterized protein C6orf132 1 WKS(1)DVALNGR 68.171 0.053903 0.0 663780.0 722340.0 747150.0 850370.0 718560.0 660480.0 710650.0 771750.0 920670.0 729990.0 True False 626958.8001873748 687637.7021455554 795312.484482268 931188.9091269362 775106.5839528646 656357.6993273834 782489.4372756348 769072.9793778034 753499.5362020095 723522.8565236253 0.8665362739192229 0.9504021827997383 1.0992223359792346 1.287020721917622 1.0712952285669153 0.9071692668854219 1.0814992646332302 1.062956024738509 1.041431558668949 1.0 19.4646790675206 -4.58868316470047 3.8253248467289818 1.0732000259597745 0.8809390124535753 0.3516330453006373 0.09003021675343101 0.2442755519621356 6.953782325990963 0.025416001283774213 0.0831676424364781 2.5782013727147895e-05 4.58868316470047 -0.19226101350619917 WKS(ph)LDEMEK ddPTM_KYSE-520_SHP099_60min_R1 1 WKSLDEMEK 9 1 P23246;P23246-2;H0Y9K7 P23246 SFPQ Splicing factor, proline- and glutamine-rich 1 WKS(1)LDEMEK 90.759 0.002641 71441000.0 143210.0 138760.0 119130.0 126430.0 140850.0 127150.0 117770.0 130060.0 153440.0 117690.0 True False 135265.85581794273 132093.76131699362 126809.31041473936 138445.8691874345 151934.09367312535 126356.40968610226 129675.3409244376 129608.8522162323 125579.16390762842 116647.35816143449 1.1596135390459603 1.132419656981704 1.087116865855129 1.1868753083617367 1.3025077984437132 1.083234217025566 1.1116869080307243 1.1111169104821021 1.0765710075819526 1.0 16.831794107857878 -7.8143345576624395 0.8003122169336994 1.0032375423332618 1.1607343376519124 0.42849193554540144 0.05762863000502031 0.6435814365564982 0.9219151306980773 0.05938763911577191 0.022788229147936236 1.5334352496951954e-08 7.8143345576624395 0.15749679531865057 WKSEEEVES(ph)DDEYLALPAR ddPTM_KYSE-520_SHP099_60min_R1 4 WKSEEEVESDDEYLALPAR 19 1 Q5HYA6;Q76N32-2;Q76N32 Q5HYA6 DKFZp686H16130;CEP68 Centrosomal protein of 68 kDa 1 WKSEEEVES(1)DDEYLALPAR;WKSEEEVES(1)DDEYLALPAR;WKSEEEVES(1)DDEYLALPAR;WKSEEEVES(1)DDEYLALPAR 248.18 1.4428e-26 643050000.0 489009.0 480215.0 435166.0 395123.0 439799.0 426876.0 391634.0 444759.0 582700.0 409456.0 True False 461882.69595472614 457144.7505825898 463217.49665021757 432675.371121938 474408.67918599217 424211.7085423873 431224.1866995083 443216.2348365305 476896.3686716316 405828.5383919473 1.1381227593921501 1.126448012734584 1.1414118348740776 1.0661531415123453 1.168987969810567 1.0452978743764088 1.0625772854915245 1.0921268292090252 1.1751178725904372 1.0 18.630510795294967 -6.2683525687022135 24.867741600553387 1.080003983485104 1.1254102303646567 0.23161227648669014 0.0478869684554183 921.6010470519598 3315116.5436510653 0.016462476744111137 0.014833718191434907 5.390728150391312e-07 6.2683525687022135 0.045406246879552636 WKTPFEK ddPTM_KYSE-520_SHP099_60min_R1 2 WKTPFEK 7 1 P05120;H7C004;H7BYS2 P05120 SERPINB2;SERPINB10 Plasminogen activator inhibitor 2 0 ; 114.89 0.0030461 5586300000.0 8193300.0 7167300.0 4549300.0 4165700.0 7404300.0 6461200.0 4498400.0 5010700.0 5297400.0 5468400.0 False True 7738801.316061377 6822972.149663374 4842555.157137364 4561606.875536631 7986976.285295868 6420873.2541395575 4953142.172153256 4993319.051206171 4335525.696586747 5419954.23035082 1.427835178519665 1.258861580685662 0.8934679060608816 0.8416319920180155 1.4736243049009827 1.1846729660895956 0.9138715866670061 0.9212843575771239 0.7999192451309904 1.0 22.369849237891383 -6.769824783026746 11.087794277715245 0.9020657178621219 1.1685708313722991 0.32081355067401307 0.19281871217154561 0.3505705704022212 430.8818227058378 0.08470371048913357 0.059586417771778054 1.698928950477073e-07 6.769824783026746 0.26650511351017725 WLDDLLAS(ph)PPPSGGGAR ddPTM_KYSE-520_SHP099_60min_R1 15 WLDDLLASPPPSGGGAR 17 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 WLDDLLAS(0.997)PPPS(0.003)GGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(0.966)PPPS(0.034)GGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(0.974)PPPS(0.026)GGGAR;WLDDLLAS(0.966)PPPS(0.034)GGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR;WLDDLLAS(1)PPPSGGGAR 161.26 4.6072e-08 57973857000.0 12158933.0 12406406.0 10529654.0 9232195.0 9900971.0 12632911.0 10417244.0 11929129.0 14915809.0 12671216.0 True False 11484452.748257983 11810383.633364942 11208412.344882067 10109620.03703935 10680121.088881062 12554064.316508614 11470320.686024027 11887749.635778645 12207474.082546154 12558958.88429687 0.9144430564716317 0.94039511890847 0.8924634954332511 0.8049727792070362 0.8503986028837933 0.999610272807376 0.9133177990068886 0.9465553431059104 0.9720132213992518 1.0 23.582213536504987 -6.257018966364499 24.994948578460587 0.959647690994084 0.8803250301954295 0.5138314617080377 0.04146015582608281 382.49764121522406 2162810.650583708 0.01533458964816668 0.014827794172195494 5.533259440210596e-07 6.257018966364499 -0.07932266079865447 WLDES(ph)DAEMELR ddPTM_KYSE-520_SHP099_60min_R1 21 WLDESDAEMELR 12 0 H3BPZ1;H3BS72;Q9P035 H3BPZ1 HACD3 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 1 WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR;WLDES(1)DAEMELR 248.67 2.5317000000000002e-17 30092734000.0 13805784.0 16919430.0 13567757.0 17282300.0 15325760.0 15572250.0 15505210.0 17399740.0 21801540.0 12704928.0 True False 13039949.640371917 16106595.186217828 14442356.325398764 18924804.59588704 16531810.12035387 15475057.811517155 17072627.94306695 17339384.36306984 17842929.90809905 12592372.222204408 1.0355435346310908 1.2790755309644288 1.1469130732914834 1.5028784300480345 1.312843190197552 1.2289231558950937 1.3557912394745137 1.3769752082530502 1.4169633483861142 1.0 23.586046755912236 -3.54191000915367 1.0504159558260098 1.319713126569942 0.1949062464855879 0.2355092559051346 0.13575429812563097 9.201974240351621 2.781524528778334 0.04015605925493922 16.654448062038124 0.0002871375502643651 3.54191000915367 -1.124806880084354 WLHNEDQMAVEK ddPTM_KYSE-520_SHP099_60min_R1 5 WLHNEDQMAVEK 12 0 P37837 P37837 TALDO1 Transaldolase 0 ;;;; 201.09 5.4188e-08 5661080000.0 8501770.0 8065440.0 4948620.0 4912200.0 8139450.0 8198840.0 6132530.0 6628500.0 6144860.0 6696850.0 False True 8030159.870241676 7677964.15592775 5267615.963271955 5379054.011093221 8779978.40786454 8147667.998354719 6752465.980125156 6605507.280603534 5029108.323314846 6637521.11907046 1.2098130802431626 1.1567517478577902 0.793611932644163 0.8104010389719891 1.3227797321259773 1.227516696699527 1.0173174380906216 0.9951768381760856 0.7576786925567083 1.0 22.66221311557313 -7.453849702019833 3.109920077734768 0.8783110397966867 1.0740009930150183 0.17010967301403768 0.17131787890599703 0.5072989736856609 9.383409135588128 0.13118265470177456 0.05045485360014275 3.5168212747216575e-08 7.453849702019833 0.1956899532183316 WLICELCS(ph)LY(ph)NLPK ddPTM_KYSE-520_SHP099_60min_R1 1 WLICELCSLYNLPK 14 0 Q8WVN8-2;Q8WVN8-3;Q8WVN8 Q8WVN8-2 UBE2Q2 Ubiquitin-conjugating enzyme E2 Q2 2 WLICELCS(1)LY(1)NLPK 59.306000000000004 0.041236 0.0 134450.0 152930.0 139650.0 112060.0 124840.0 148110.0 126530.0 119880.0 154230.0 148780.0 True False 126991.79048056969 145583.01324739016 148652.06244790019 122710.14870793237 134664.19775756472 147185.59055138516 139320.88721379862 119464.1642602022 126225.71982190799 147461.9249490883 0.861183593828807 0.9872583264978614 1.0080708121721778 0.8321480188889331 0.9132133450994754 0.998126062725693 0.9447922727300596 0.8101356624867577 0.8559885534214192 1.0 17.169982969398447 -7.207374394049628 24.99922092827379 0.87479631470867 0.9374305570462883 0.07335365603989097 0.06993295210110899 599.8980352191559 277388.15418117214 0.03285080378469197 0.018966404735117112 6.203340297203268e-08 7.207374394049628 0.06263424233761827 WLIS(ph)PVK ddPTM_KYSE-520_SHP099_60min_R1 4 WLISPVK 7 0 Q8NCD3;C9JWC4;Q8NCD3-3;Q8NCD3-2 Q8NCD3 HJURP Holliday junction recognition protein 1 WLIS(1)PVK;WLIS(1)PVK;WLIS(1)PVK;WLIS(1)PVK 122.13 0.0031574999999999997 15450698000.0 4518530.0 4163910.0 3693770.0 3242730.0 3709980.0 3889090.0 3457680.0 3641550.0 4202670.0 3537960.0 True False 4267878.13343376 3963869.5134436665 3931876.324440965 3550918.0842376756 4001934.3191013276 3864816.7467253157 3807216.0381048596 3628918.3129941626 3439571.068689212 3506616.426891228 1.2170929505447576 1.1303972350799183 1.121273571380246 1.012633733477865 1.1412523732027402 1.102149843674704 1.0857235507449345 1.034877463404619 0.9808803273469363 1.0 21.741648198578552 -1.0000000000104545 0.1757245171138545 0.9838997071229835 1.8379848607465854 0.6401127922438367 0.04243799279336017 41.70457057407462 0.4615383805658142 0.10890443112257045 9.451754445831838 0.09999999999759275 1.0000000000104545 0.8540851536236019 WLKEDK ddPTM_KYSE-520_SHP099_60min_R1 2 WLKEDK 6 1 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 ; 108.09 0.010454999999999999 2906200000.0 3029700.0 2907700.0 1678640.0 1870070.0 3044200.0 2889700.0 2366000.0 2506300.0 2151560.0 2427800.0 False True 2861636.501442783 2768009.72745332 1786847.8203189631 2047800.8905429505 3283761.2208713465 2871664.3104202114 2605178.3699347805 2497606.2302748146 1760890.940413823 2406291.5807998213 1.1892309827604561 1.150321826972136 0.7425732752325207 0.8510194304309069 1.3646564061782842 1.1933983118811005 1.0826528217618796 1.0379482894773049 0.7317861868712207 1.0 21.198380040053525 -7.607919488923728 7.643368071443737 0.8676931618829605 1.0765953881611217 0.18768596623794875 0.17699425230159926 0.4389283991739752 33.77471490874469 0.13066979507321833 0.04870630768933399 2.466496542872297e-08 7.607919488923728 0.20890222627816113 WLKEDKLECSEELGDLVK ddPTM_KYSE-520_SHP099_60min_R1 4 WLKEDKLECSEELGDLVK 18 2 A0A087WVQ6;Q00610-2;Q00610;A0A087WX41;P53675-2;P53675 A0A087WVQ6 CLTC;CLTCL1 Clathrin heavy chain;Clathrin heavy chain 1;Clathrin heavy chain 2 0 ;;; 181.4 1.5489e-09 4024497000.0 4988970.0 4326400.0 2891610.0 2934680.0 4503920.0 3671590.0 3221940.0 3139750.0 3449570.0 2791230.0 False True 4712221.888834868 4118553.2499412047 3078007.807339586 3213591.104856287 4858352.880200666 3648674.244902841 3547645.138304167 3128858.9400731563 2823215.044583148 2766501.873744081 1.7033141866112391 1.488722378621529 1.112599212945381 1.1616081432495589 1.7561357634743084 1.318876477016392 1.2823577572723333 1.1309802352812706 1.020499957501317 1.0 21.39963147023861 -7.231508335767902 1.5192178788563966 1.0068119869160412 1.4166815817384268 0.4405185307899334 0.19185531689315719 0.4528140271197348 1.890651136052201 0.16185842971895145 0.06385736857336262 5.8680210653966055e-08 7.231508335767902 0.4098695948223856 WLKS(ph)PT(ph)TPIDPEK ddPTM_KYSE-520_SHP099_60min_R1 1 WLKSPTTPIDPEK 13 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 2 WLKS(0.799)PT(0.637)T(0.563)PIDPEK 85.63600000000001 0.0028141 534110000.0 909970.0 904950.0 710670.0 954660.0 922120.0 1168800.0 1187800.0 1424900.0 1471200.0 1329000.0 True False 859492.1501197773 861474.8436423562 756480.9253122034 1045390.5993710059 994685.5978548995 1161505.0856556536 1307874.4158108758 1419957.3544741615 1204067.165933934 1317226.0939463538 0.6525016123426276 0.6540068159911818 0.5742984661394146 0.7936303449919214 0.7551365725491084 0.8817811087964659 0.9929004761001502 1.0779906054093031 0.9140930106589368 1.0 20.329071566110525 -6.135273026844209 1.0276316780866956 1.011720732386486 0.6333095433246662 0.8744404597077006 0.057298317642711344 0.1648259074855945 0.37027048532399837 0.030172229411388272 0.031005614051044728 7.323639749255e-07 6.135273026844209 -0.3784111890618199 WLKS(ph)PTTPIDPEK ddPTM_KYSE-520_SHP099_60min_R1 1 WLKSPTTPIDPEK 13 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 WLKS(0.499)PT(0.499)T(0.001)PIDPEK 135.09 9.928099999999999e-06 868490000.0 1229300.0 1266700.0 1126100.0 1198300.0 1288700.0 1526900.0 1637300.0 1889100.0 1958400.0 1994400.0 True False 1161108.278451205 1205845.8306445365 1198690.2078237059 1312186.0717179687 1390113.3583000144 1517370.0507252042 1802814.2625081223 1882547.153019253 1602803.927246476 1976731.1676197194 0.5873880563381582 0.6100201435567769 0.6064002164073269 0.6638161492126607 0.7032384479341818 0.7676157869015366 0.9120179273942348 0.9523536552955362 0.8108355620134691 1.0 20.914685249438488 -6.3342143696919 0.9661383546700164 0.9331770603436919 0.5984851543699548 0.8917094613206512 0.047538320273946624 0.16332666957152622 0.3216161029691429 0.028327273502093454 0.024080126762260557 4.6321821672019953e-07 6.3342143696919 -0.3346919059737371 WLKSPT(ph)T(ph)PIDPEK ddPTM_KYSE-520_SHP099_60min_R1 1 WLKSPTTPIDPEK 13 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 2 WLKS(0.629)PT(0.683)T(0.688)PIDPEK 92.211 0.0020355 412340000.0 1877700.0 1741800.0 1406800.0 1758300.0 1816600.0 2189300.0 2270300.0 2731200.0 2655600.0 2335600.0 True False 1773540.2378978492 1658121.3135048999 1497484.5789595868 1925408.3033478274 1959556.0849598863 2175635.7666203994 2499804.079992785 2721726.1046668724 2173409.982228223 2314908.4010693016 0.7661384083614782 0.7162794487846608 0.646887184939097 0.83174276030034 0.8464940055747903 0.9398366542777375 1.0798717041408967 1.175738142990735 0.9388751542930519 1.0 21.14252367773947 -6.132284916960386 1.277284077024042 1.0627113483328687 0.7178496071495147 0.7961422684921968 0.07058612753277564 0.1836304576732627 0.6154913565954743 0.03276661046642326 0.03304938696339232 7.374202901064575e-07 6.132284916960386 -0.344861741183354 WLKSPTT(ph)PIDPEK ddPTM_KYSE-520_SHP099_60min_R1 1 WLKSPTTPIDPEK 13 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 WLKS(0.231)PT(0.231)T(0.539)PIDPEK 155.06 4.6548e-05 0.0 261050.0 217920.0 244370.0 231220.0 247950.0 315300.0 310560.0 350020.0 379520.0 322250.0 True False 246569.0361097268 207450.79609541135 260122.4812058245 253195.07928117234 267462.2543574827 313332.0957454034 341954.43557351857 348805.86231528205 310608.7349206409 319395.1157067064 0.7719874975675763 0.6495114855980105 0.814422226308211 0.7927330971262436 0.8374024560948123 0.981017180090911 1.070631386509767 1.0920826436043025 0.9724905599554193 1.0 18.284982725196002 -6.130363381788499 1.4735484565577315 1.0447952075475762 0.7424395590837529 0.862047239447228 0.05115329779935861 0.13545567088808028 0.5936481144758161 0.022217381168667664 0.022328606789251523 7.406902334789179e-07 6.130363381788499 -0.30235564846382323 WLNS(ph)PNTYMK ddPTM_KYSE-520_SHP099_60min_R1 2 WLNSPNTYMK 10 0 Q9UEY8-2;Q9UEY8 Q9UEY8-2 ADD3 Gamma-adducin 1 WLNS(1)PNTYMK;WLNS(1)PNTYMK 221.75 2.6929000000000005e-09 1754710000.0 2655600.0 2582400.0 2106640.0 2207000.0 2092960.0 2154300.0 2114500.0 2402100.0 2641600.0 2098200.0 True False 2508288.5741926483 2458337.627738574 2242437.385143178 2416752.616441254 2257664.0446865787 2140854.21460299 2328254.2955313153 2393767.6757543534 2161952.029316939 2079611.5803748963 1.2061332019224829 1.1821138384387164 1.0782962579670425 1.1621173103900395 1.0856181346516567 1.0294490734741213 1.1195620939519848 1.1510647941875873 1.0395941481183708 1.0 20.98788266336586 -1.0000000000000002 0.17741571733835798 1.0270829846099139 1.7316674998171415 0.5299548626968076 0.045409665852645276 53.1724334417577 0.5924191040645566 0.11243656345351898 10.063632658096683 0.09999999999999995 1.0000000000000002 0.7045845152072276 WLPLGLGLNHLGK ddPTM_KYSE-520_SHP099_60min_R1 1 WLPLGLGLNHLGK 13 0 Q13200;Q13200-3;Q13200-2;H7C1H2 Q13200 PSMD2 26S proteasome non-ATPase regulatory subunit 2 0 112.94 0.007937999999999999 0.0 37873.0 40272.0 36731.0 31486.0 42801.0 42815.0 31404.0 27639.0 32713.0 22321.0 False True 35772.109192046264 38337.27267049563 39098.73903167792 34478.419973388896 46169.19519562264 42547.77570358217 34578.62279350459 27543.126759991093 26773.143827621545 22123.25330547521 1.6169461470295214 1.7328948930403318 1.7673141690242051 1.5584697014184594 2.0869080400664393 1.9232151400197621 1.562999000013567 1.244985372615814 1.2101811364694517 1.0 14.433275934315489 -7.211401361304998 2.307684227604202 1.1293771885975044 1.7810483163066064 0.7807857611567097 0.14951825547964928 0.15494198867660805 1.5814045739052007 0.10267528581252668 0.04595512228257113 6.146086082131642e-08 7.211401361304998 0.6516711277091021 WLPS(ph)SPSGVAK ddPTM_KYSE-520_SHP099_60min_R1 2 WLPSSPSGVAK 11 0 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 WLPS(0.526)S(0.379)PS(0.095)GVAK;WLPS(0.481)S(0.481)PS(0.038)GVAK 71.45100000000001 0.022453 428460000.0 1386660.0 1349120.0 1271970.0 1171700.0 1217210.0 1298810.0 1237140.0 1465210.0 1637400.0 1425520.0 True False 1309739.205561822 1284306.2501295954 1353963.2214239575 1283058.015715549 1312997.5020224708 1290703.6450208938 1362202.1845228702 1460127.5284925848 1340089.4354949866 1412891.0018377765 0.9269923892630197 0.9089917399566363 0.9582927626142637 0.9081082787325059 0.9292985094495102 0.9135196156972115 0.9641240426551133 1.0334325341398358 0.9484733314543758 1.0 20.430218741879568 -6.958074471428261 4.7679811329437225 0.994470194261304 0.924962375507777 0.643692100830036 0.023462041297216532 0.11332307417478317 5.877888332458906 0.009663201387339353 0.006237887702682096 1.1013504372989825e-07 6.958074471428261 -0.06950781875352696 WLPSS(ph)PSGVAK ddPTM_KYSE-520_SHP099_60min_R1 5 WLPSSPSGVAK 11 0 Q8IWI9-3;Q8IWI9;H3BP52;H3BTF4 Q8IWI9-3 MGA MAX gene-associated protein 1 WLPS(0.171)S(0.7)PS(0.129)GVAK;WLPS(0.003)S(0.982)PS(0.015)GVAK;WLPS(0.005)S(0.641)PS(0.354)GVAK;WLPS(0.151)S(0.424)PS(0.424)GVAK;WLPS(0.007)S(0.965)PS(0.028)GVAK 184.98 1.0614e-06 2690460000.0 7663620.0 8008800.0 6672970.0 5965800.0 6154460.0 7041130.0 6435680.0 8017870.0 9199160.0 8023440.0 True False 7238503.721552276 7624045.226546127 7103120.323329504 6532787.838316828 6638780.987912702 6997183.695895434 7086261.3405840425 7990057.8803549325 7528824.435952155 7952358.563741872 0.9102335695168023 0.9587149731033681 0.893209261930869 0.8214906038194177 0.8348191212329988 0.8798878521145312 0.8910892641201154 1.0047406459745096 0.9467410675216801 1.0 22.922951377339796 -7.21746018905239 7.118433084891718 0.9817363443023664 0.8826907518923272 0.5837718215124119 0.03852825524186217 0.19125817828474265 26.377377371092887 0.020957985629230416 0.01189806693756059 6.060937574404655e-08 7.21746018905239 -0.0990455924100393 WLTS(ph)PVR ddPTM_KYSE-520_SHP099_60min_R1 8 WLTSPVR 7 0 E7EPJ7;O75962-4;O75962;O75962-5;O75962-2;E7EWP2;A0A1W2PRD7;C9J1B4;H7BXZ5;O60229-5;O60229-6;O60229-4;O60229 E7EPJ7 TRIO;KALRN Triple functional domain protein;Kalirin 1 WLT(0.025)S(0.975)PVR;WLT(0.01)S(0.99)PVR;WLT(0.017)S(0.983)PVR;WLT(0.009)S(0.991)PVR;WLT(0.015)S(0.985)PVR;WLT(0.025)S(0.975)PVR;WLT(0.013)S(0.987)PVR;WLT(0.036)S(0.964)PVR 149.19 0.0013779000000000003 5405980000.0 7694950.0 7429240.0 6601880.0 6410670.0 6710340.0 7021280.0 6350390.0 6660580.0 7415020.0 6962710.0 True False 7268095.783997472 7072328.15888341 7027447.748181482 7019938.149361776 7238405.581388158 6977457.587108419 6992349.395033873 6637476.002571054 6068639.285442807 6901025.806306403 1.0531906397677324 1.0248227375733712 1.0183192970760304 1.0172311111989623 1.0488883514641323 1.0110754231250911 1.0132333353461764 0.961810053877134 0.8793822042944787 1.0 22.71837939725463 -7.291289019684421 2.9166267347373176 0.9351131754322805 1.0274800516673372 0.5993527681570974 0.03015392903042559 0.16633639545848922 2.810300882030919 0.017841133529163822 0.007884166697134475 5.113414284406099e-08 7.291289019684421 0.0923668762350568 WLTS(ph)PVRR ddPTM_KYSE-520_SHP099_60min_R1 1 WLTSPVRR 8 1 E7EPJ7;O75962-4;O75962;O75962-5;O75962-2;E7EWP2;A0A1W2PRD7;C9J1B4;H7BXZ5;O60229-5;O60229-6;O60229-4;O60229 E7EPJ7 TRIO;KALRN Triple functional domain protein;Kalirin 1 WLT(0.124)S(0.876)PVRR 52.79 0.040553 229370000.0 56302.0 51280.0 46165.0 53749.0 50971.0 55799.0 43642.0 47075.0 65727.0 41334.0 True False 53178.81582474557 48816.43182715075 49140.86976661163 58857.28879977389 54982.127714681425 55450.73774341192 48053.75926487477 46911.707812387576 53792.63364283561 40967.81291736537 1.2980633340620489 1.191580129640226 1.199499467197134 1.4366714893590415 1.3420811070774952 1.3535195997711547 1.1729637450210533 1.1450869468431573 1.3130462627169943 1.0 15.322203255587269 -8.974817091851165 0.5014307251841693 0.9745452845239406 1.2909250060166344 0.467560341298335 0.08801866209850903 3.9272054806483863 1.2570670137641515 0.3125962234046469 0.048490212744581145 1.0596999361033698e-09 8.974817091851165 0.3163797214926938 WMALESILHR ddPTM_KYSE-520_SHP099_60min_R1 2 WMALESILHR 10 0 P00533;E9PFD7;Q504U8 P00533 EGFR Epidermal growth factor receptor;Receptor protein-tyrosine kinase 0 ; 187.64 1.0970999999999998e-06 75671000.0 76283.0 102441.0 62160.0 109306.0 110864.0 94245.0 84197.0 80323.0 80028.0 67430.0 False True 72051.42992360966 97519.58059292419 66166.93305951642 119694.40937595289 119588.36607012694 93656.7819965924 92708.45444353276 80044.37826052909 65496.93254170817 66832.6226597462 1.0780877220759855 1.4591613603046734 0.9900394511880989 1.790957837841156 1.7893711380887636 1.4013632604755253 1.3871736698935768 1.1976842307692415 0.980014399182893 1.0 16.028264869387705 -7.473331795617341 2.0723953870418086 0.9826160650285128 1.4320859985301024 0.3334767720383589 0.24099471651624604 0.4154842007500252 3.2543240856183377 0.21164708444495345 0.07197261800520852 3.362545768770065e-08 7.473331795617341 0.4494699335015896 WNFDDLLEK ddPTM_KYSE-520_SHP099_60min_R1 2 WNFDDLLEK 9 0 Q9Y295 Q9Y295 DRG1 Developmentally-regulated GTP-binding protein 1 0 ; 174.42 0.00044741 395210000.0 770850.0 750050.0 457500.0 361490.0 688110.0 707120.0 540690.0 499730.0 491740.0 574670.0 False True 728089.4138486218 714016.4721519968 486991.182025882 395845.9009140689 742260.3421896659 702706.6017871541 595348.2218258823 497996.5532678589 402452.4117566298 569578.870886494 1.278294282081464 1.2535866561213895 0.8550021900705825 0.6949799600149726 1.3031739415375607 1.2337301078136198 1.0452428140448413 0.8743241344131599 0.7065788994775242 1.0 19.119536103478723 -7.249976518125311 3.9068632922543203 0.83682670489958 1.0920819975781089 0.2327419098472392 0.19592300773439544 0.3547926227702224 12.532109495263407 0.11727077618477236 0.05848630685537408 5.623717312536848e-08 7.249976518125311 0.25525529267852887 WNGWGYNDSK ddPTM_KYSE-520_SHP099_60min_R1 2 WNGWGYNDSK 10 0 B8ZZ81;A0A1B0GWA2;O00116 B8ZZ81 AGPS Alkyldihydroxyacetonephosphate synthase, peroxisomal 0 ; 141.95 0.0017239 608800000.0 723480.0 827630.0 546490.0 479230.0 804590.0 876830.0 612580.0 649520.0 664950.0 700860.0 False True 683347.1221783762 787869.4125020431 581717.6198149162 524775.8751142467 867906.655509124 871357.3787264264 674505.5646046695 647266.9667191072 544211.8420254011 694650.9256608296 0.9837273613769391 1.134194720539001 0.8374243786712317 0.7554526392015115 1.249414091953414 1.2543816563657406 0.9709993029419839 0.931787380983268 0.7834321123342431 1.0 19.405928654671897 -7.2200582119726535 3.5507458948140767 0.8890692515272964 1.0326228366962107 0.11525142937590926 0.15818951460622116 0.5519344913877104 14.456089186718792 0.09454956064725546 0.04784950840530164 6.02478825592836e-08 7.2200582119726535 0.14355358516891426 WNLDELPK ddPTM_KYSE-520_SHP099_60min_R1 4 WNLDELPK 8 0 P17844-2;P17844;J3KTA4;J3QR02;J3KRX8;J3QRQ7;X6RLV5;J3KTQ4 P17844-2 DDX5 Probable ATP-dependent RNA helicase DDX5 0 ;;; 141.52 0.0045059 520730000.0 1379340.0 1396810.0 948110.0 954890.0 1471840.0 1557280.0 1195360.0 1114380.0 1181050.0 1278320.0 False True 1302825.2605538794 1329705.150945444 1009226.687629635 1045642.4585018527 1587665.434375952 1547560.4378763156 1316198.654389364 1110514.4758782464 966601.0918476586 1266995.079317911 1.0282796530316893 1.0494951185298154 0.7965513869027446 0.8252932277091211 1.25309518583977 1.2214415534347989 1.038834858851971 0.8764947031018413 0.7629083235019586 1.0 20.272979490758356 -7.278207361761282 7.2677871184555265 0.8639615663365652 1.0302662437056052 0.18113619486093635 0.14564632188480606 0.32370493065210887 92.17664244529303 0.08603317328333877 0.04302290610789431 5.2697818607068005e-08 7.278207361761282 0.16630467736903998 WNNNKKS(ph)PIK ddPTM_KYSE-520_SHP099_60min_R1 2 WNNNKKSPIK 10 2 Q5QJE6;J3KP30 Q5QJE6 DNTTIP2 Deoxynucleotidyltransferase terminal-interacting protein 2 1 WNNNKKS(1)PIK;WNNNKKS(1)PIK 117.93 0.00042083 5125100000.0 5289500.0 4949700.0 4788800.0 4033800.0 3825100.0 3983000.0 3242300.0 3457000.0 6154800.0 3522400.0 True False 4996080.890643174 4711908.982348832 5097493.710350908 4417171.139193803 4126113.6081581246 3958140.6195811657 3570063.325798617 3445008.473869867 5037243.46988186 3491194.2763857306 1.4310520971108436 1.3496553354879037 1.4601002713684854 1.2652321210169641 1.1818630765027767 1.1337497447088056 1.02259085091493 0.986770772732912 1.4428424977531418 1.0 21.73528921088388 -5.638706279400997 1.8594596151940017 1.1129729350402833 1.4094432262343646 0.5142376269826793 0.12483693400321556 0.27715592640664793 1.9613754346491996 0.04149857910603089 0.06014201377124349 2.2977020969787114e-06 5.638706279400997 0.2964702911940813 WNS(ph)FQLSHQPR ddPTM_KYSE-520_SHP099_60min_R1 6 WNSFQLSHQPR 11 0 H3BRG5;Q9Y3M8-5;Q9Y3M8-3;Q9Y3M8-4;Q9Y3M8-2;Q9Y3M8 H3BRG5 STARD13 StAR-related lipid transfer protein 13 1 WNS(1)FQLSHQPR;WNS(1)FQLSHQPR;WNS(1)FQLSHQPR;WNS(1)FQLSHQPR;WNS(1)FQLSHQPR;WNS(1)FQLSHQPR 186.69 6.498699999999999e-07 6003760000.0 3557770.0 3557550.0 3374050.0 3452330.0 3316890.0 3298030.0 3346880.0 3732330.0 3859270.0 3636380.0 True False 3360413.4058613395 3386639.9580085846 3591546.661670873 3780438.40521914 3577910.3724774844 3277445.771427891 3685215.292801066 3719383.418362367 3158523.8522796724 3604164.50226083 0.9323695973792013 0.9396463329806961 0.9964990941501027 1.0489083955096214 0.9927156127954546 0.90934966186255 1.0224880941170678 1.0319682733763296 0.876353965058583 1.0 21.78123342985958 -4.735403495975782 9.214019821084843 0.987152058569718 0.9357823622880339 0.127657523837993 0.05070491714234969 0.5621441845555455 180.0052185002579 0.012971918327995458 0.033488080830647 1.8390625642162828e-05 4.735403495975782 -0.051369696281684085 WNS(ph)NDFIDAFASPVEAEGTPEPGAEAAK ddPTM_KYSE-520_SHP099_60min_R1 6 WNSNDFIDAFASPVEAEGTPEPGAEAAK 28 0 O00562-2;O00562 O00562-2 PITPNM1 Membrane-associated phosphatidylinositol transfer protein 1 1 WNS(0.949)NDFIDAFAS(0.049)PVEAEGT(0.002)PEPGAEAAK;WNS(1)NDFIDAFASPVEAEGTPEPGAEAAK;WNS(1)NDFIDAFASPVEAEGTPEPGAEAAK;WNS(1)NDFIDAFASPVEAEGTPEPGAEAAK;WNS(1)NDFIDAFASPVEAEGTPEPGAEAAK;WNS(1)NDFIDAFASPVEAEGTPEPGAEAAK 157.95 5.1513e-08 399915000.0 658232.0 625796.0 489195.0 467122.0 521676.0 594803.0 475759.0 562151.0 716792.0 561732.0 True False 621718.5588070387 595731.8208210533 520729.2924396749 511517.1344346493 562728.9332695877 591090.6138460296 523853.3626803889 560201.0293880298 586640.6416558712 556755.4915008829 1.1166815025587453 1.0700061874829458 0.9352926022083954 0.9187464555683473 1.0107290217337628 1.0616700200883287 0.9409038090817973 1.0061886015310932 1.0536773334276863 1.0 19.08668435739513 -4.580255854871702 5.8902516471901825 0.9901973542896615 1.106042118933003 0.46219240958662333 0.04540733978364292 0.15443756767934594 10.810595381160208 0.012338147226765461 0.0343650684516455 2.6287188847460226e-05 4.580255854871702 0.11584476464334148 WNSPAEEGS(ph)SDCEVFSK ddPTM_KYSE-520_SHP099_60min_R1 1 WNSPAEEGSSDCEVFSK 17 0 P34932;A0A087WYC1;A0A087WTS8 P34932 HSPA4 Heat shock 70 kDa protein 4 1 WNSPAEEGS(0.5)S(0.5)DCEVFSK 146.88 7.5999e-06 302750000.0 298190.0 300580.0 229640.0 246460.0 246320.0 261330.0 228690.0 281710.0 310320.0 252080.0 True False 281648.80627297214 286139.6856202219 244442.96183699137 269883.4842990992 265703.9826309142 259698.94253455874 251808.21699931743 280732.813761608 253973.71053060002 249846.76731527253 1.1272861734391375 1.1452607079728698 0.9783715213274611 1.0801960225426612 1.0634677626051972 1.039432870495595 1.0078506106167457 1.1236199562564742 1.0165178971882387 1.0 17.930684026077166 -4.73620951226946 24.998822058380373 1.0443906053816379 1.1362735526614958 0.47505918305552686 0.04068229601430626 194.36400837127124 192581.0525850284 0.009880077767003045 0.026119604365348208 1.835652574509195e-05 4.73620951226946 0.09188294727985791 WNTEDK ddPTM_KYSE-520_SHP099_60min_R1 2 WNTEDK 6 0 P00558-2;P00558;P07205 P00558-2 PGK1;PGK2 Phosphoglycerate kinase 1;Phosphoglycerate kinase 2 0 ; 138.24 0.052377 968150000.0 1553990.0 1648950.0 1135350.0 1129900.0 1595040.0 1698610.0 1254750.0 1581210.0 1437760.0 1427840.0 False True 1467787.0768977364 1569731.9668755878 1208536.4776242299 1237285.3562831788 1720560.5734638437 1688008.3449226124 1381592.3751799096 1575725.15156719 1176699.0269801344 1415190.448442712 1.037165759925035 1.1092019230365318 0.8539744448912258 0.8742889394460643 1.215780233223849 1.1927782206134245 0.9762589739778318 1.1134368192642423 0.8314775076916215 1.0 20.432564785303768 -1.5703580290162291 17.946927592616486 1.026354429637878 1.2367821344293601 0.0 0.1312108401276452 0.0 0.0 0.030944923459143844 0.0 0.026893168377876645 1.5703580290162291 0.2104277047914822 WPCTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 4 WPCTSPR 7 0 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 WPCT(0.007)S(0.993)PR;WPCT(0.009)S(0.991)PR;WPCT(0.003)S(0.997)PR;WPCT(0.228)S(0.772)PR 90.135 0.007465899999999999 2247550000.0 4282410.0 3979000.0 3817510.0 3088040.0 3541440.0 3829170.0 3530680.0 3335110.0 3793480.0 3744760.0 True False 4044856.1805273094 3787842.867399232 4063592.8028319622 3381526.3931469186 3820131.1799627524 3805270.72967151 3887595.5905162 3323541.281830525 3104679.65784874 3711584.339779198 1.0897923393997124 1.0205460850782042 1.09484048611804 0.9110735695549587 1.029245419272895 1.0252416168718625 1.0474221342219243 0.8954508311208799 0.8364836613233035 1.0 21.823603721460845 -7.265627496234606 24.443242019345437 0.8994754182792352 1.0282858528427266 0.4518688273146507 0.06039613254049194 225.53236873034177 1316264.857964426 0.030751449818840888 0.015629396248528906 5.424659757102554e-08 7.265627496234606 0.1288104345634914 WPEVDDDSIEDLGEVKK ddPTM_KYSE-520_SHP099_60min_R1 1 WPEVDDDSIEDLGEVKK 17 1 O43583 O43583 DENR Density-regulated protein 0 145.62 2.0554e-05 549310000.0 485470.0 466270.0 376930.0 261280.0 486440.0 397030.0 336090.0 402810.0 442050.0 458200.0 False True 458540.01133954787 443869.6893144619 401227.5109093235 286111.97264330386 524720.0605350032 394551.98849919945 370065.25712230784 401412.7461265611 361784.86317366484 454140.7044742059 1.0096871009843422 0.9773836278964786 0.8834872253387986 0.6300073299409662 1.1554129708379972 0.8687879870975297 0.8148691660457109 0.8838951060141326 0.7966360636898456 1.0 18.792779825251664 -6.4887968371654 24.95982661175113 0.8609821812303677 0.9241506668676143 0.04108983081059714 0.13338818918761972 2243.419107194842 1642966.4384862625 0.04744696657435759 0.0418195576692461 3.244913788239337e-07 6.4887968371654 0.06316848563724653 WPFSGKT(ph)SPPCSPANLSR ddPTM_KYSE-520_SHP099_60min_R1 1 WPFSGKTSPPCSPANLSR 18 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 WPFS(0.133)GKT(0.718)S(0.141)PPCS(0.003)PANLS(0.005)R 76.186 0.027558999999999997 700260000.0 694450.0 714150.0 676650.0 446400.0 535540.0 514650.0 433740.0 478620.0 817700.0 528180.0 True False 655927.4741482462 679841.1620389953 720267.9416782795 488825.72178494604 577683.9511942182 511437.878450276 477586.6720944678 476959.7789307476 669226.2925395451 523500.7361178216 1.2529638048123395 1.298644137696087 1.37586805898239 0.9337631985199895 1.1035016979693453 0.9769573243449448 0.912294174858581 0.9110966728868185 1.2783674336399133 1.0 18.997832040232407 -5.260392218372124 24.999950513986924 1.0104913041204597 1.308107224132392 0.6099976146562216 0.10713273212236951 61.159727773046846 1460109.5676785263 0.029363546575580834 0.047345100197194526 5.4904479864509444e-06 5.260392218372124 0.2976159200119324 WPFSGKTS(ph)PPCS(ph)PANLSR ddPTM_KYSE-520_SHP099_60min_R1 3 WPFSGKTSPPCSPANLSR 18 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 2 WPFS(0.064)GKT(0.233)S(0.703)PPCS(0.999)PANLS(0.001)R;WPFS(0.004)GKT(0.159)S(0.837)PPCS(0.995)PANLS(0.004)R;WPFS(0.06)GKT(0.357)S(0.58)PPCS(0.873)PANLS(0.13)R 66.845 0.018587 1019610000.0 2135110.0 2291800.0 2391530.0 1567520.0 1827110.0 1791740.0 1265340.0 1350690.0 2717790.0 1685100.0 True False 2016671.1920637346 2181698.4879380665 2545691.8503832933 1716496.6295079263 1970893.1621661638 1780557.0860477933 1393252.9157283495 1346004.7716434153 2224307.8459105445 1670171.324987963 1.2074636666859724 1.3062722699743332 1.5242100090549933 1.0277368577863095 1.180054484638196 1.0660924777047203 0.8341976028946555 0.8059082032516132 1.33178423831853 1.0 20.671564670246756 -5.679859751322561 1.4784542677520227 0.9924184645007358 1.3316823712862567 0.37541279799536276 0.16943707839582708 0.4063544280475818 1.841212024827545 0.06268602555429582 0.09313016201978205 2.0899709456392514e-06 5.679859751322561 0.3392639067855209 WPFSGKTS(ph)PPCSPANLSR ddPTM_KYSE-520_SHP099_60min_R1 1 WPFSGKTSPPCSPANLSR 18 1 P49585;C9JEJ2 P49585 PCYT1A Choline-phosphate cytidylyltransferase A 1 WPFS(0.059)GKT(0.207)S(0.734)PPCSPANLSR 72.145 0.009163899999999999 829670000.0 393450.0 408670.0 393230.0 291060.0 284770.0 345130.0 231620.0 264970.0 512990.0 284370.0 True False 371624.5441768704 389036.8797738245 418578.23499024566 318722.2548896199 307179.7788803408 342975.9156505265 255034.40999336142 264050.8809144631 419843.94742553623 281850.7030365121 1.3185155835099287 1.380294161350476 1.4851062299320266 1.1308194425483882 1.0898669954374658 1.216870889288135 0.904856391152316 0.9368466286218803 1.4895969493861718 1.0 18.104571640518117 -5.331825062148014 6.341891147979306 1.1006659234208387 1.392550669727409 0.40005626555819784 0.15968724879058266 0.22787806017583417 16.572890322998585 0.044958688140194596 0.06731794072782805 4.657736737037935e-06 5.331825062148014 0.29188474630657035 WPFWLSPR ddPTM_KYSE-520_SHP099_60min_R1 1 WPFWLSPR 8 0 P26639;P26639-2;B7ZLP8;A2RTX5-2;A2RTX5 P26639;B7ZLP8 TARS;TARSL2 Threonine--tRNA ligase, cytoplasmic;Probable threonine--tRNA ligase 2, cytoplasmic 0 102.77 0.031662 20387000.0 34655.0 30387.0 29663.0 23747.0 38857.0 29010.0 25413.0 20775.0 24847.0 21461.0 False True 32732.618066970208 28927.16290818311 31575.1244424781 26003.90774020411 41914.82483391295 28828.937829286875 27981.994046979085 20702.93637392144 20335.411141898097 21270.87223640534 1.5388470065156972 1.3599424878625306 1.484430167768904 1.2225125256357907 1.9705268485499738 1.3553246669380028 1.315507598183378 0.9732998319875256 0.9560214981261469 1.0 14.376591573418587 -7.080284569192273 2.163084793981958 0.9614005035247524 1.4935893674616487 0.6081335969189312 0.18416407410211302 0.2244406255811825 2.0401670352413817 0.11113104154389637 0.05513066186422622 8.312189407515344e-08 7.080284569192273 0.5321888639368964 WPS(ph)DSWIR ddPTM_KYSE-520_SHP099_60min_R1 4 WPSDSWIR 8 0 Q5VT97-2;Q5VT97 Q5VT97-2 SYDE2 Rho GTPase-activating protein SYDE2 1 WPS(0.992)DS(0.008)WIR;WPS(0.982)DS(0.018)WIR;WPS(0.724)DS(0.276)WIR;WPS(0.997)DS(0.003)WIR 164.34 0.00018641 780865000.0 1160650.0 1091350.0 1026081.0 1064627.0 1135330.0 1101167.0 1009348.0 1127740.0 1310020.0 1110493.0 True False 1096266.4308015879 1038919.9078502522 1092223.8230476475 1165808.82998822 1224674.011855943 1094294.2082958415 1111382.7461271898 1123828.133156494 1072153.3909167843 1100654.8959704812 0.9960128599936642 0.9439106768649811 0.992339948739882 1.0591956064123902 1.1126775670916451 0.9942209972463427 1.0097467882039897 1.0210540445246283 0.9741049577319454 1.0 20.069930760372223 -5.015675370216589 11.580903355338602 1.0270157430568108 0.9694883481993767 0.25141330185194144 0.03830133834376681 0.9144540478011527 676.271870318372 0.010912609399094548 0.020083192291939115 9.64549743295043e-06 5.015675370216589 -0.05752739485743408 WPS(ph)LVDR ddPTM_KYSE-520_SHP099_60min_R1 4 WPSLVDR 7 0 Q99698 Q99698 LYST Lysosomal-trafficking regulator 1 WPS(1)LVDR;WPS(1)LVDR;WPS(1)LVDR;WPS(1)LVDR 92.051 0.0070277000000000004 436371000.0 1116710.0 956270.0 993320.0 1042640.0 1152430.0 1222910.0 1217520.0 1309600.0 1480720.0 1316550.0 True False 1054763.8701938065 910329.3538094676 1057350.996568193 1141732.1921188545 1243119.6845702524 1215277.3650745694 1340598.8034501253 1305057.3032629392 1211858.5739136054 1304886.3912604023 0.8083185457815986 0.6976311193882341 0.8103011907012744 0.8749667402202306 0.9526650694621094 0.9313281012155559 1.02736821567679 1.000130978454279 0.928708109786523 1.0 20.31549277466337 -5.467431353050546 1.3464245203043845 0.9815497221910721 0.7488344711999251 0.8470477060018978 0.03886599578126795 0.15368952859037374 0.5600383221689061 0.01365118310959731 0.026208072560954747 3.4085419781212495e-06 5.467431353050546 -0.23271525099114698 WQDEDGKK ddPTM_KYSE-520_SHP099_60min_R1 5 WQDEDGKK 8 1 H7C422;P39023;H7C3M2;B5MCW2;G5E9G0 H7C422 RPL3 60S ribosomal protein L3 0 ;;;; 102.61 0.0055613 9465700000.0 11002500.0 11023190.0 7422950.0 7152630.0 11017890.0 10846030.0 8659270.0 10420380.0 10233400.0 9265460.0 False True 10392169.392060021 10493619.406254476 7901445.234139926 7832413.804683378 11884935.259781277 10778335.903639449 9534633.51793116 10384234.133914981 8375272.523020884 9183375.232818792 1.1316285274853346 1.142675665560658 0.860407533594227 0.8528905338303657 1.2941794229759742 1.1736791354360343 1.0382493665136399 1.1307644379818718 0.912003736174258 1.0 23.130593064650732 WQHWHEECER ddPTM_KYSE-520_SHP099_60min_R1 6 WQHWHEECER 10 0 J3QLV0;J3QLD4;J3QL54;J3KT10;Q9BW27-2;Q9BW27-3;Q9BW27 J3QLV0 NUP85 Nuclear pore complex protein Nup85 0 ;;;;; 257.8 1.3047e-19 5332430000.0 1675590.0 1802850.0 1591570.0 1619040.0 1645360.0 1411200.0 1549960.0 1718700.0 1780750.0 988280.0 False True 1582641.6824941472 1716238.3798669786 1694165.148802039 1772913.0748178726 1774840.4711822069 1402392.1773419403 1706645.0829518628 1712738.2308475939 1457410.6890544146 979524.608070205 1.615724270176493 1.7521135923764066 1.729578955795477 1.8099729809858984 1.811940666481959 1.4317069380266427 1.7423197629656113 1.7485402783518815 1.4878755235416794 1.0 19.901722211436972 -8.112243959949831 2.9712697347535553 1.0003582591435887 1.7061524982961853 0.8029221825703062 0.1060542160177287 0.19136861759507423 3.541752570669162 0.1045590441132285 0.02793820039444547 7.722466625159618e-09 8.112243959949831 0.7057942391525966 WQLSS(ph)PDGVDTDDDLPK ddPTM_KYSE-520_SHP099_60min_R1 1 WQLSSPDGVDTDDDLPK 17 0 Q8NG08 Q8NG08 HELB DNA helicase B 1 WQLS(0.118)S(0.882)PDGVDTDDDLPK 246.48 8.9644e-22 0.0 164320.0 161410.0 135940.0 133320.0 129390.0 139860.0 123910.0 140490.0 175020.0 124790.0 True False 155204.84203620095 153655.6213186507 144702.9099116902 145990.6927158805 139572.25687160602 138987.08186156733 136436.03204506275 140002.67298061238 143240.77989515846 123684.45768515102 1.2548451514521546 1.2423195621699998 1.1699360826729206 1.1803479228369327 1.1284542899229804 1.1237230971685255 1.1030976292297932 1.1319342429992354 1.1581146295663896 1.0 16.916304695613384 -1.0000000000000002 0.1013275418520962 0.9521663971972243 1.8224069566247791 0.8150923156757742 0.029503555639340838 56.25972588173571 0.4040796841852781 0.38824394970238923 6.810955974999586 0.09999999999999995 1.0000000000000002 0.8702405594275548 WQPDT(ph)EEEYEDSSGNVVNKK ddPTM_KYSE-520_SHP099_60min_R1 1 WQPDTEEEYEDSSGNVVNKK 20 1 Q12874 Q12874 SF3A3 Splicing factor 3A subunit 3 1 WQPDT(1)EEEYEDSSGNVVNKK 129.78 3.3772e-07 0.0 234170.0 236770.0 239320.0 209770.0 218160.0 211070.0 205290.0 215250.0 244480.0 228220.0 True False 221180.12329367816 225395.21380098432 254746.95012553877 229706.47773034967 235327.95083939724 209752.6338375589 226042.71663732524 214503.3479897276 200088.59483926624 226198.14835247333 0.9778157995750884 0.9964503044903894 1.1262114742362048 1.015509982744905 1.040361968271718 0.9272959808261197 0.9993128515141252 0.9482984257478434 0.8845722049301576 1.0 17.787227593978347 -6.253667563448408 24.483390563803905 0.9516281035588651 1.0337344686720369 0.4043357233204681 0.04812314244488441 464.3023433969696 1462681.9064609744 0.01635952846158432 0.01606348835166433 5.576124175352952e-07 6.253667563448408 0.08210636511317182 WQRPS(ph)SPPPFLPAASEEAEPAEGLR ddPTM_KYSE-520_SHP099_60min_R1 4 WQRPSSPPPFLPAASEEAEPAEGLR 25 1 H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3 H3BLU1 TPRN Taperin 1 WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR;WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR;WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLR;WQRPS(0.683)S(0.317)PPPFLPAASEEAEPAEGLR 187.69 2.6375999999999997e-15 7337150000.0 2534060.0 2625770.0 2130850.0 1892610.0 1931490.0 2384030.0 1932550.0 2379750.0 2644170.0 2406220.0 True False 2393490.6402766258 2499624.067838876 2268208.000480545 2072483.0853660537 2083487.2743252038 2369150.384458971 2127911.013870437 2371495.202687827 2164055.382101369 2384902.762810835 1.003600934008592 1.0481031372922018 0.951069383561469 0.8690010836850367 0.8736151875096222 0.9933949599130414 0.8922422528298349 0.9943781522953137 0.9073977420994823 1.0 21.18549901523195 -4.869932760963143 5.3240981129076825 0.9296097305206579 1.0250010550359503 0.3660885733471546 0.04796298881308864 0.19535465459613058 8.290307399767409 0.012433827153664733 0.027004008583078238 1.3491717500551005e-05 4.869932760963143 0.09539132451529242 WQRPS(ph)SPPPFLPAASEEAEPAEGLRVPGLAK ddPTM_KYSE-520_SHP099_60min_R1 1 WQRPSSPPPFLPAASEEAEPAEGLRVPGLAK 31 2 H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3 H3BLU1 TPRN Taperin 1 WQRPS(0.5)S(0.5)PPPFLPAASEEAEPAEGLRVPGLAK 131.24 2.7329000000000002e-05 460230000.0 53498.0 69811.0 52221.0 56584.0 57433.0 36123.0 30715.0 28461.0 86029.0 52980.0 True False 50530.359294381014 66457.17477155267 55587.2492165542 61961.7263474001 61952.65035093087 35897.54295785349 33819.971949512576 28362.275433847328 70408.3022146075 52510.638417816306 0.9622880394696667 1.2655944923534668 1.0585902379296541 1.1799842510841982 1.1798114099848953 0.6836241957719911 0.6440594319271847 0.5401243688597834 1.3408388154488462 1.0 15.680322115429249 -6.253707292848528 24.84091606357092 0.8006327633073249 1.1357208060220936 0.28596815358858696 0.22235988816297908 616.8317142989313 1981699.929023195 0.07267334710567105 0.07135871228890116 5.575614093035709e-07 6.253707292848528 0.33508804271476866 WQRPSS(ph)PPPFLPAASEEAEPAEGLR ddPTM_KYSE-520_SHP099_60min_R1 1 WQRPSSPPPFLPAASEEAEPAEGLR 25 1 H3BLU1;Q4KMQ1;Q4KMQ1-2;Q4KMQ1-4;Q4KMQ1-3 H3BLU1 TPRN Taperin 1 WQRPS(0.206)S(0.794)PPPFLPAASEEAEPAEGLR 153.88 2.7458e-07 3771100000.0 1511400.0 1748400.0 1301800.0 1202900.0 1457100.0 1647100.0 1368600.0 1528800.0 1773500.0 1591500.0 True False 1427559.6290987977 1664404.2395980968 1385716.1109536448 1317223.2543349278 1571765.4802350807 1636819.8379392782 1506951.4442488325 1523496.9496246006 1451477.106296787 1577400.5481682646 0.9050076917727284 1.0551563720013057 0.8784808098125675 0.8350594627753463 0.9964276239540252 1.0376691195143894 0.955338481401417 0.9658275771450322 0.9201702814052496 1.0 20.589117618470272 WQS(ph)LKDLVK ddPTM_KYSE-520_SHP099_60min_R1 2 WQSLKDLVK 9 1 A0A087X0X3;P52272-2;P52272;M0R2T0;M0QYQ7;M0R0N3;M0R019;M0R0Y6 A0A087X0X3 HNRNPM Heterogeneous nuclear ribonucleoprotein M 1 WQS(1)LKDLVK;WQS(1)LKDLVK 127.02 0.00041660000000000004 779780000.0 909100.0 886780.0 856860.0 886890.0 915840.0 795150.0 714490.0 867930.0 1092250.0 875140.0 True False 858670.410754079 844177.7577160832 912094.5666244745 971179.7589467975 987911.3975832101 790187.1739040845 786717.6219504226 864919.3534063844 893924.9333818239 867386.9404486176 0.9899508174632762 0.973242411604064 1.0515428859843496 1.119661495531046 1.1389512010317524 0.9109973151029863 0.9069973102702327 0.9971551484958294 1.0305953337497573 1.0 19.726316196296057 -6.274273840976815 24.997965274335133 0.9650867393396331 1.0535829607745109 0.3420523012312625 0.059161368065681535 1031.7472156272179 2009550.8156363424 0.023471987363993464 0.020831317269441426 5.317728483368737e-07 6.274273840976815 0.08849622143487779 WQS(ph)PAEPCVLR ddPTM_KYSE-520_SHP099_60min_R1 2 WQSPAEPCVLR 11 0 A0A3B3IT71;A0A3B3ISN0;A0A3B3IS51;A0A3B3ITD3;A0A3B3IUD9;A0A3B3IRP7;A0A3B3ISK6;A0A3B3IRM9;A0A3B3IUC5;A0A3B3ITW7;A0A3B3ISL7;A0A3B3ITZ8;A0A3B3ITY4;Q8N8U9 A0A3B3IT71 BMPER BMP-binding endothelial regulator protein 1 WQS(1)PAEPCVLR;WQS(1)PAEPCVLR 82.171 0.013578 2378670000.0 5317300.0 4717200.0 3985600.0 3983300.0 4543300.0 4641000.0 4288500.0 5339500.0 6127900.0 4948900.0 True False 5022338.769225241 4490578.631338452 4242518.153185468 4361871.634377185 4900831.862159111 4612033.79750846 4722023.431726674 5320978.520748674 5015227.8317880435 4905056.596185942 1.0239104627519475 0.915499860864036 0.8649274620978586 0.8892602050237045 0.9991386982099011 0.9402610769251204 0.962684800701058 1.0847945210022945 1.0224607470763474 1.0 22.225838352163333 -7.086595128888883 4.92975036644941 1.0395847198413275 0.9359338225535766 0.444439915745639 0.0483345557053776 0.20534754428121144 8.427598536741998 0.02447710701412452 0.013972547238805397 8.192281578554748e-08 7.086595128888883 -0.1036508972877509 WQS(ph)PVTK ddPTM_KYSE-520_SHP099_60min_R1 12 WQSPVTK 7 0 A9Z1X7 A9Z1X7 SRRM1 1 WQS(0.997)PVT(0.003)K;WQS(1)PVTK;WQS(1)PVTK;WQS(1)PVTK;WQS(1)PVTK;WQS(1)PVTK;WQS(0.998)PVT(0.002)K;WQS(1)PVTK;WQS(0.962)PVT(0.038)K;WQS(0.998)PVT(0.002)K;WQS(0.978)PVT(0.022)K;WQS(0.999)PVT(0.001)K 184.71 0.00011859 261567500000.0 104115000.0 91825500.0 85164800.0 80593000.0 83189100.0 85768900.0 85897400.0 86376900.0 99622800.0 78907500.0 True False 98339533.40189312 87414065.14711443 90654659.27649783 88252534.4888311 89735608.88876814 85233584.48074189 94580747.46983759 86077278.6944201 81533810.80641878 78208440.93910596 1.2574030657184623 1.1177062743799748 1.1591416244581918 1.1284272314998018 1.14739033039461 1.0898258993182819 1.2093419371890983 1.1006136634463908 1.0425193217942037 1.0 26.220820988416836 -13.999999996347485 0.05824299394214123 0.43251924982246087 1.381815559672453 0.5774199823913491 0.04625747154450406 326.5786442707196 1.3896652903174656 26.327780790497986 4.611132124738033 1.000000008410226e-14 13.999999996347485 0.9492963098499922 WREENSR ddPTM_KYSE-520_SHP099_60min_R1 1 WREENSR 7 1 E5RGJ2;Q15006 E5RGJ2 EMC2 ER membrane protein complex subunit 2 0 88.921 0.008486200000000001 292400000.0 338750.0 327910.0 270310.0 262110.0 404580.0 346970.0 308670.0 291680.0 325130.0 325120.0 False True 319958.8622186165 312156.7113970552 287734.6151112918 287020.85559375474 436418.1442546898 344804.43152801314 339873.3759288963 290668.2301586236 266094.5878603181 322239.68973953265 0.992921953460296 0.9687096944804423 0.8929210903345538 0.8907060946643618 1.354327719864204 1.070024712991499 1.0547222665327696 0.9020249193808858 0.8257660255178472 1.0 18.297774673831793 -7.269068502585419 22.35651649341581 0.8979215253029171 1.0326803807239628 0.15824139951227456 0.1289740537583786 269.03261043249495 788357.4219410105 0.07388069540640957 0.03674176033920288 5.381848862870941e-08 7.269068502585419 0.1347588554210457 WREEQMER ddPTM_KYSE-520_SHP099_60min_R1 6 WREEQMER 8 1 F8WF69;P09496-2;P09496-4;P09496-3;P09496 F8WF69 CLTA Clathrin light chain A 0 ;;;;; 200.6 2.6157e-06 5948130000.0 4599400.0 4366430.0 3189140.0 2724580.0 4722120.0 4383420.0 3530920.0 3743190.0 3751380.0 3569360.0 False True 4344262.113323413 4156660.1486549494 3394717.067204412 2983523.2640251564 5093723.978812492 4356061.449832906 3887859.8520583767 3730205.7475571106 3070223.9565941063 3537738.2473200583 1.2279772582424153 1.1749484721781616 0.9595727071600085 0.8433420042551943 1.4398250019404741 1.2313125351014174 1.0989676398482975 1.0544041098526302 0.8678493834075746 1.0 21.754395878160036 -7.492634974738325 2.9430459806761213 0.9358819044668824 1.1374008447380874 0.21553577179429595 0.15474426966758198 0.45848499117900904 7.725245971008178 0.1243502657341661 0.04495989629763246 3.216362761322472e-08 7.492634974738325 0.2015189402712051 WREEQR ddPTM_KYSE-520_SHP099_60min_R1 7 WREEQR 6 1 A0A0C4DG89;Q7L014;D6RJA6;H0Y9Q6;F8VW50;Q2TAC6-3;Q2TAC6-2;Q2TAC6;P09497-2;P09497 A0A0C4DG89;P09497-2 DDX46;CLTB;KIF19 Probable ATP-dependent RNA helicase DDX46;Kinesin-like protein;Kinesin-like protein KIF19;Clathrin light chain B 0 ;;;;;; 162.07 0.006593099999999999 17484520000.0 8551350.0 7650540.0 5529790.0 4788660.0 7854190.0 7676550.0 6036100.0 6327050.0 6458370.0 5864430.0 False True 8076989.568806391 7282996.57470535 5886249.111376828 5243772.806636867 8472270.068771921 7628637.803978355 6646287.894659057 6305102.940294571 5285692.810258803 5812475.7126575 1.3895954096148027 1.2529938936081195 1.012692250663289 0.9021582309957527 1.4576009410796051 1.3124592998067761 1.1434521576039984 1.0847534255608682 0.9093703047650502 1.0 22.47072135216523 -7.423794766121465 2.34940040486279 0.9589118848479726 1.2080840429431245 0.2977175549639982 0.15764739453971302 0.4524597798267105 4.650965073768801 0.13134068199152682 0.04782481500306788 3.768818593911246e-08 7.423794766121465 0.24917215809515192 WRLS(ph)PGETPER ddPTM_KYSE-520_SHP099_60min_R1 3 WRLSPGETPER 11 1 A0A0G2JHC2;Q6NYC8;Q6NYC8-2 A0A0G2JHC2 PPP1R18 Phostensin 1 WRLS(1)PGETPER;WRLS(1)PGETPER;WRLS(1)PGETPER 193.98 4.2043e-07 3242630000.0 1898320.0 1648770.0 1411070.0 1387220.0 1577910.0 1551480.0 1478020.0 1588650.0 1862330.0 1590060.0 True False 1793016.4053928975 1569560.6143457768 1502029.8299918259 1519060.9717170987 1702082.5399202073 1541796.637827715 1627432.6856851245 1583139.343943698 1524177.817518858 1575973.3054479596 1.1377200357357862 0.9959309646426022 0.9530807563805049 0.963887501435385 1.0800199051825958 0.9783139298729872 1.0326524440859979 1.0045470557597431 0.9671342859996103 1.0 20.587811667301196 -4.260875258936158 23.906357962608155 0.998100062373068 1.1377201108588548 0.586648806346701 0.03535847015001291 18.34454869832937 777028.0771784893 0.008940946143992604 0.051307583665398955 5.484344674399509e-05 4.260875258936158 0.1396200484857868 WRPDEEILK ddPTM_KYSE-520_SHP099_60min_R1 1 WRPDEEILK 9 1 P10155-3;P10155-5;P10155-4;P10155;G5E9R9 P10155-3 TROVE2 60 kDa SS-A/Ro ribonucleoprotein 0 128.03 0.00067678 382990000.0 188160.0 169410.0 130990.0 123060.0 174900.0 157100.0 137750.0 156930.0 147760.0 139680.0 False True 177722.38971233933 161271.2893104058 139433.82499141016 134755.58540066183 188663.63495512723 156119.48062671386 151675.11431044614 156385.64645773722 120930.5087264806 138442.54386939545 1.2837266980589426 1.1648968937073754 1.0071602348115611 0.9733683131956038 1.3627576443055653 1.127684281603454 1.09558167649342 1.1296068541276518 0.8735068379021161 1.0 17.078927830689064 -7.747707560322776 23.743820330787354 0.9367535240658682 1.138859965985044 0.34935270613697045 0.11252135961848406 128.69734904104433 222536.55574648373 0.0794703159934346 0.02963074185786921 1.787690942170678e-08 7.747707560322776 0.20210644191917582 WRPHS(ph)PDGPR ddPTM_KYSE-520_SHP099_60min_R1 13 WRPHSPDGPR 10 1 I1E4Y6;Q6Y7W6;Q6Y7W6-3;C9JH78;C9IYH5 I1E4Y6 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR;WRPHS(1)PDGPR 123.28 0.00029928 166353180000.0 39292540.0 35738380.0 35608440.0 34962760.0 32981390.0 35405300.0 34379480.0 35043150.0 41826960.0 29372610.0 True False 37112904.47846345 34021454.58039799 37903817.01791846 38285610.19846294 35576837.754560776 35184322.38977081 37854893.34979093 34921593.49178268 34232238.43585653 29112391.526944805 1.2748146933965838 1.1686245202119392 1.3019822498208986 1.315096705917407 1.2220513633046204 1.2085686041013213 1.300301739716387 1.1995439625583904 1.1758648685448283 1.0 24.795130023161878 -8.231618079472504 1.1825129130999557 1.0003011950586829 1.2540099382124492 0.7428759554450033 0.044969281480492604 0.4275519498713628 1.1428493207097152 0.043653199446424804 0.01352479604161156 5.866538437734322e-09 8.231618079472504 0.25370874315376635 WRPHS(ph)PGWR ddPTM_KYSE-520_SHP099_60min_R1 2 WRPHSPGWR 9 1 Q6Y7W6-4;Q6Y7W6-5;E7ESB6;C9JHW1 Q6Y7W6-4 GIGYF2 PERQ amino acid-rich with GYF domain-containing protein 2 1 WRPHS(1)PGWR;WRPHS(1)PGWR 114.87 0.00056315 2340100000.0 1759860.0 1506910.0 1640660.0 1737410.0 1703250.0 1887860.0 1842310.0 1914100.0 2458200.0 1659640.0 True False 1662237.0576060654 1434515.7816819751 1746419.5687488148 1902532.9240286371 1837286.084833164 1876077.165473892 2028548.6740129113 1907460.433854299 2011852.8461791747 1644936.8807803835 1.010517228367738 0.8720795298853161 1.06169397084725 1.1565993481318542 1.116934094128601 1.1405162030192015 1.2332076067566413 1.1595949097751217 1.2230577778915874 1.0 20.649600795514353 -5.000150581180551 3.683073237210051 1.1546822498173042 0.9418556765465371 0.5863132406962763 0.06834926287844473 0.13523072858008547 4.018622252738418 0.017840461049102058 0.037492725450392 9.996533341208837e-06 5.000150581180551 -0.21282657327076704 WRS(ph)LQQLAEER ddPTM_KYSE-520_SHP099_60min_R1 6 WRSLQQLAEER 11 1 A0A0D9SGF6;Q13813;Q13813-2;A0A0D9SF54;Q13813-3 A0A0D9SGF6 SPTAN1 Spectrin alpha chain, non-erythrocytic 1 1 WRS(1)LQQLAEER;WRS(1)LQQLAEER;WRS(1)LQQLAEER;WRS(1)LQQLAEER;WRS(1)LQQLAEER;WRS(1)LQQLAEER 237.59 2.3821e-14 2607012000.0 1596177.0 1482360.0 1397699.0 1229912.0 1303774.0 1195077.0 1062714.0 1253539.0 1871270.0 1136405.0 True False 1507633.8799100374 1411145.2005322762 1487796.913937469 1346802.4666934744 1406373.5963406854 1187618.0811516943 1170143.5022091598 1249190.7657872008 1531494.5388779193 1126337.3358097128 1.3385278388434263 1.2528619585515364 1.320915916249821 1.1957363250551145 1.2486255685821313 1.054407097584071 1.038892581295776 1.1090733886479665 1.359712130803995 1.0 20.10320754577762 -5.81656062637106 1.6406315169723715 1.1183639703609585 1.2942059017385 0.38744599572530736 0.0987688807677472 0.41176340501004177 2.2954517545915047 0.036816691214284346 0.04727394653991584 1.5255954108222195e-06 5.81656062637106 0.17584193137754145 WS(ph)DQGPAQTSR ddPTM_KYSE-520_SHP099_60min_R1 1 WSDQGPAQTSR 11 0 Q9C0C2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 WS(1)DQGPAQTSR 149.82 6.6169e-05 724170000.0 1768600.0 1883700.0 1722000.0 1681400.0 1658500.0 1868000.0 1658800.0 1834400.0 2252300.0 1583300.0 True False 1670492.2323833092 1793204.2245086578 1833002.875297416 1841199.7504686555 1789014.5144258328 1856341.1191005842 1826487.6923279015 1828036.8945521766 1843339.0958625642 1569273.1937887603 1.0645005847262143 1.1426972891694223 1.1680584888294194 1.1732818464982326 1.1400274480611894 1.1829304970275725 1.1639067687877453 1.164893978809816 1.1746451179810924 1.0 20.581665101371975 -4.271187785221334 3.72312746832631 1.1546520662356152 1.0558143610503279 0.16950570287463307 0.05104514044850341 0.35974006430627636 9.521801913924618 0.011607772070164508 0.09684407522280314 5.3556503369867056e-05 4.271187785221334 -0.09883770518528734 WS(ph)GNEPTDEFSDLPLR ddPTM_KYSE-520_SHP099_60min_R1 7 WSGNEPTDEFSDLPLR 16 0 Q96II8-3;Q96II8;Q96II8-2;E9PD99;Q96II8-4 Q96II8-3 LRCH3 Leucine-rich repeat and calponin homology domain-containing protein 3 1 WS(1)GNEPTDEFSDLPLR;WS(1)GNEPTDEFSDLPLR;WS(1)GNEPTDEFSDLPLR;WS(1)GNEPTDEFSDLPLR;WS(1)GNEPTDEFSDLPLR;WS(1)GNEPTDEFSDLPLR;WS(1)GNEPTDEFSDLPLR 203.59 8.800899999999999e-13 2154994000.0 2368561.0 2418173.0 2242411.0 2197280.0 2332080.0 2400758.0 2151477.0 2315268.0 2886307.0 2376507.0 True False 2237172.1997207054 2302000.339328326 2386960.401044458 2406108.83056368 2515601.428279888 2385773.9788060365 2368969.291552057 2307236.8756956123 2362226.406678412 2355452.9968744703 0.9497842676925773 0.9773068460219446 1.0133763671836356 1.0215057713978697 1.0679905018771014 1.0128726754351711 1.0057382994674577 0.9795300007077884 1.002875629364258 1.0 21.16757311260036 -4.574310991581827 2.5955259212691972 1.0144916333194958 0.9508045967728621 0.4808974263921755 0.021410342984882924 0.28588791935701857 3.541082987692197 0.006424615101723268 0.029242209018834085 2.6649496517426947e-05 4.574310991581827 -0.06368703654663366 WS(ph)IDQLAVINPVEIDPEDIHR ddPTM_KYSE-520_SHP099_60min_R1 1 WSIDQLAVINPVEIDPEDIHR 21 0 A0A087WV86;Q6PGQ7;H3BLY2 A0A087WV86 BORA Protein aurora borealis 1 WS(1)IDQLAVINPVEIDPEDIHR 107.47 0.00024869 18184000.0 10788.0 12577.0 9882.6 11213.0 14383.0 13008.0 12032.0 10910.0 18447.0 10799.0 True False 10189.568134655168 11972.782041538128 10519.648208719082 12278.680148688627 15514.860271924495 12926.81224692739 13248.31198100392 10872.155756413147 15097.489811027252 10703.329261494862 0.9519998764601267 1.1186035437226165 0.982838886080374 1.1471832594051905 1.4495359240922425 1.2077375114892044 1.237774869606657 1.0157732693065546 1.4105414719269027 1.0 13.385771995051526 -5.517095289019993 24.98364356838711 1.2282769933053528 1.0340793579287586 0.2913881980230484 0.14016530176586728 321.267023753199 1387827.739167072 0.03951662172409679 0.05271432145127723 3.040217895008483e-06 5.517095289019993 -0.19419763537659418 WS(ph)PIASTLPELVQR ddPTM_KYSE-520_SHP099_60min_R1 4 WSPIASTLPELVQR 14 0 Q13561;Q13561-3;Q13561-2;H0YI98 Q13561 DCTN2 Dynactin subunit 2 1 WS(1)PIASTLPELVQR;WS(1)PIASTLPELVQR;WS(1)PIASTLPELVQR;WS(0.987)PIAS(0.01)T(0.003)LPELVQR 197.06 5.7453e-11 827481000.0 326766.0 345990.0 313610.0 282674.0 298827.0 335604.0 282396.0 304005.0 366144.0 296612.0 True False 308639.63858812867 329368.1210584218 333825.8023937414 309539.25197096285 322342.98480695096 333509.3709500168 310943.34359936655 302950.47761030006 299661.47933912073 293984.24844064395 1.0498509366580695 1.1203597567062233 1.1355227505025376 1.0529110100722268 1.0964634551569612 1.1344463954073138 1.0576870878241855 1.0304990121654984 1.0193113438171943 1.0 18.165379332541484 -7.109779751201572 2.7229713404783116 1.01672504389438 1.0987614302550521 0.6162448296352712 0.028765089418976274 0.195080889310013 2.7832344819866712 0.016191437175257707 0.008378112627862184 7.766408836728075e-08 7.109779751201572 0.08203638636067212 WS(ph)PPQNYK ddPTM_KYSE-520_SHP099_60min_R1 4 WSPPQNYK 8 0 H3BRM1;H3BRF9;Q96K21-3;Q96K21-2;Q96K21 H3BRM1 ZFYVE19 Abscission/NoCut checkpoint regulator 1 WS(0.999)PPQNY(0.001)K;WS(0.999)PPQNY(0.001)K;WS(1)PPQNYK;WS(1)PPQNYK 88.948 0.0046037 7327540000.0 7017000.0 6345590.0 5606620.0 5685250.0 6285360.0 6080150.0 5896400.0 6163290.0 7213800.0 5813080.0 True False 6627753.021957297 6040738.331475219 5968031.696109171 6225574.450667257 6779982.073193585 6042201.52853287 6492465.655318439 6141910.985512706 5903955.76509939 5761580.63370781 1.1503358962264614 1.0484515822158613 1.035832365374448 1.0805323827709494 1.176757300510154 1.0487055397929004 1.1268549497224123 1.0660114603933155 1.0247111236382986 1.0 22.458033224669556 -7.753993530335323 2.5554901237917442 1.002666037933599 1.0922898716776392 0.36438669997193973 0.043600342421758025 0.3120896579736546 3.8216465957295287 0.040805659402227426 0.011667813010786728 1.7620022946822688e-08 7.753993530335323 0.08962383374404026 WS(ph)TTAGFLK ddPTM_KYSE-520_SHP099_60min_R1 4 WSTTAGFLK 9 0 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5;Q8TEW0-8;Q5VWU8;Q8TEW0-9;Q8TEW0-10 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 WS(0.966)T(0.034)TAGFLK;WS(0.893)T(0.107)TAGFLK;WS(0.888)T(0.109)T(0.003)AGFLK;WS(0.999)T(0.001)TAGFLK 172.27 8.533799999999999e-07 8959960000.0 9671400.0 9043700.0 8436630.0 10245600.0 9602270.0 8672060.0 9198720.0 11529900.0 10374100.0 10817300.0 True False 9134908.162542088 8609227.07712954 8980468.668885266 11219338.74354804 10357914.019557284 8617934.456802685 10128616.388455823 11489905.467998886 8490424.949779259 10721467.13773205 0.8520203480728504 0.802989643724327 0.8376156503134082 1.046436891464586 0.9660911036237463 0.8038017881408782 0.94470432622138 1.071672870922905 0.791908872238102 1.0 23.353999003542906 -5.089097254965483 10.708437465442552 0.9441355652694646 0.8257083794947683 0.2736932744494114 0.0862612790006091 0.7403447578475714 85.76905287487371 0.023272699023299113 0.04036172051813226 8.145218613347693e-06 5.089097254965483 -0.11842718577469635 WSAEASGKPSPSDPGSGTATMMNS(ph)SSR ddPTM_KYSE-520_SHP099_60min_R1 3 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPSPSDPGS(0.002)GTATMMNS(0.333)S(0.333)S(0.333)R;WSAEASGKPSPSDPGSGT(0.002)AT(0.007)MMNS(0.33)S(0.33)S(0.33)R;WSAEASGKPSPSDPGS(0.012)GT(0.002)AT(0.004)MMNS(0.442)S(0.442)S(0.099)R 119.39 0.00020209 1915190000.0 2061600.0 2688240.0 1847310.0 2653310.0 2384090.0 2263700.0 2670350.0 2412640.0 2738620.0 1887510.0 True False 1947238.9383022885 2559092.9152694955 1966390.5584005078 2905479.7846532585 2571704.3193834703 2249571.408623118 2940295.0381045416 2404271.1149544073 2241355.6429921086 1870788.1298605597 1.0408655620705842 1.3679223608609485 1.0511027555787804 1.5530779452132937 1.3746635860765024 1.2024725690293914 1.5716878844659434 1.2851648332479055 1.1980809623584523 1.0 20.835214749331342 -4.253105669343204 23.86411959573281 1.3078340083671114 1.0408653068256897 0.14011531442984104 0.1794919605813799 1014.70708606589 2905551.6483722175 0.042639059347939254 0.45634303061820114 5.583343284009894e-05 4.253105669343204 -0.2669687015414217 WSAEASGKPSPSDPGSGTATMMNSS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 2 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPSPSDPGSGTATMMNS(0.111)S(0.444)S(0.444)R;WSAEASGKPSPSDPGSGTATMMNS(0.119)S(0.441)S(0.441)R 161.68 3.4608e-10 6170300000.0 2537380.0 3473070.0 2317760.0 3177280.0 3071980.0 2929790.0 3182060.0 3030090.0 3489000.0 2466820.0 True False 2396626.473258375 3306218.504015647 2467166.5181471184 3479247.7359159356 3313727.3488247674 2911504.093859581 3503733.678712874 3019579.3250183226 2855485.550532561 2444965.893956918 0.9802289999962698 1.3522554699791265 1.0090801365553084 1.4230250591696976 1.3553266149908747 1.190815831441976 1.4330398994001725 1.2350189965764529 1.167904042175108 1.0 21.221382909772682 -4.247941505569589 23.968839714666654 1.2545532692309231 0.9802286747872889 0.2147949362724405 0.14729147472169768 1843.1231918874087 3272824.9453835553 0.03483172745420291 0.6313804087968066 5.6501307039599264e-05 4.247941505569589 -0.2743245944436342 WSAEASGKPSPSDPGSGTATMMNSSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 WSAEASGKPSPSDPGSGTATMMNSSSR 27 1 Q5JRA6-2;Q5JRA6;Q5JRA6-4 Q5JRA6-2 MIA3 Melanoma inhibitory activity protein 3 1 WSAEASGKPSPSDPGSGTATMMNS(0.301)S(0.301)S(0.398)R 166.74 2.6464e-10 4666800000.0 2243400.0 2783200.0 1874600.0 2673500.0 2644900.0 2744200.0 2833300.0 2658800.0 2966900.0 2141900.0 True False 2118954.1298929756 2649490.8943316313 1995439.7154660504 2927588.6361829177 2853038.5825775615 2727072.4298906922 3119717.614343282 2649577.243368587 2428185.7494626082 2122924.432372983 0.9981297956632542 1.2480382504100995 0.9399485375160379 1.3790357261612414 1.3439190482105217 1.2845829028602769 1.4695377596912829 1.2480789249794053 1.1437928323941362 1.0 21.017621587302706 -5.270153665156164 24.99784805824697 1.2897066759182687 1.0806387966416962 0.2897221079059741 0.1431299757065727 735.3053849193592 2109300.3165796595 0.038787661131643024 0.058566807046551816 5.368418135807773e-06 5.270153665156164 -0.20906787927657255 WSEPWVPVEALPPS(ph)PLELSR ddPTM_KYSE-520_SHP099_60min_R1 7 WSEPWVPVEALPPSPLELSR 20 0 O43379;O43379-4 O43379 WDR62 WD repeat-containing protein 62 1 WSEPWVPVEALPPS(0.996)PLELS(0.004)R;WSEPWVPVEALPPS(1)PLELSR;WSEPWVPVEALPPS(0.993)PLELS(0.007)R;WSEPWVPVEALPPS(1)PLELSR;WSEPWVPVEALPPS(1)PLELSR;WSEPWVPVEALPPS(0.998)PLELS(0.002)R;WSEPWVPVEALPPS(1)PLELSR 256.84 8.103099999999999e-32 0.0 342989.0 425871.0 307316.0 251155.0 276951.0 418798.0 326090.0 379213.0 453665.0 416171.0 True False 323962.71643838 405411.51791459636 327126.0810829855 275024.69568749605 298745.46806436457 416184.1263367701 359054.3595317129 377897.5986119794 371290.87196398736 412484.04871613806 0.7853945320957699 0.9828538077446751 0.7930635914314011 0.6667523181648211 0.7242594446845004 1.0089702320178164 0.8704684718094535 0.9161508179242096 0.9001338915277693 1.0 18.653978804018088 -6.259072946832876 24.9992400453981 0.9296118451281394 0.794424489592414 0.4297921138581071 0.08521306373344735 254.5177993096685 2688759.9760512044 0.03143070534783037 0.030034109828001077 5.507151870496004e-07 6.259072946832876 -0.13518735553572547 WSHDGK ddPTM_KYSE-520_SHP099_60min_R1 4 WSHDGK 6 0 P55884;P55884-2 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 0 ;;; 144.29 0.01167 4651880000.0 16170000.0 16957000.0 7379460.0 7999190.0 14946400.0 19915700.0 11037500.0 12580600.0 11735800.0 21209600.0 False True 15273017.86590417 16142360.267024094 7855151.799153469 8759430.61255582 16122596.646617 19791398.728946187 12153278.215619244 12536960.8349341 9604874.555442827 21021699.44481912 0.72653583055904 0.7678903558390682 0.37366873309994936 0.4166851797852441 0.7669502025246812 0.9414747261941211 0.578130148208092 0.5963818894777265 0.4569028579566143 1.0 24.32537596916844 -5.79123734867426 24.99740700498351 0.706775313464888 0.5711354050619445 0.12971486916847352 0.19014940111705414 523.9957219293282 439575.3648659221 0.06266349416335297 0.0710631754990382 1.6171959733906193e-06 5.79123734867426 -0.1356399084029435 WSHS(ph)DSDKK ddPTM_KYSE-520_SHP099_60min_R1 4 WSHSDSDKK 9 1 Q86X95 Q86X95 CIR1 Corepressor interacting with RBPJ 1 1 WSHS(0.5)DS(0.5)DKK;WSHS(0.976)DS(0.024)DKK;WSHS(0.951)DS(0.049)DKK;WSHS(0.994)DS(0.006)DKK 196.88 3.2325999999999998e-06 8143690000.0 2457040.0 2220510.0 2089460.0 2564110.0 2269740.0 2192890.0 2222560.0 2284800.0 2612720.0 1852500.0 True False 2320743.093212191 2113833.3665465363 2224149.9348542034 2807802.24347222 2448355.6249459675 2179203.3600987564 2447238.0548952846 2276874.562076331 2138315.909311385 1836088.2912231928 1.2639605101267344 1.1512699997331344 1.2113523872931435 1.5292305151631223 1.333462904071397 1.1868728592822637 1.3328542350569355 1.240068123608309 1.1646040767935237 1.0 20.808204004027548 -8.05441715936301 1.5496903451859163 1.0006057288823067 1.2871208227434268 0.4431568736340856 0.09910051412266963 0.4648484919084932 2.4810232046980802 0.1017797767042726 0.029780056819703513 8.822320697517498e-09 8.05441715936301 0.28651509386112006 WSMPELAEVEENKKMS(ph)QPGS(ph)PSPK ddPTM_KYSE-520_SHP099_60min_R1 2 WSMPELAEVEENKKMSQPGSPSPK 24 2 A0A2R8YFD8;Q14839-2;Q14839;A0A0C4DGG9;A0A2U3TZM0;A0A2R8YFK9;A0A2R8Y5J0;A0A2R8Y425;A0A2R8Y521;F5GWX5;A0A2R8Y212;A0A2R8YDJ9;A0A2R8Y445;A0A2R8Y8C1;A0A2R8YER1;A0A2R8YD40;A0A2R8Y4X2;A0A2R8YDW2;A0A2R8Y5M9;A0A2R8YE38;A0A2R8Y7I0;A0A2R8Y7M9 A0A2R8YFD8 CHD4 Chromodomain-helicase-DNA-binding protein 4 2 WSMPELAEVEENKKMS(0.999)QPGS(0.5)PS(0.5)PK;WSMPELAEVEENKKMS(1)QPGS(0.572)PS(0.428)PK 92.865 0.0020701 840610000.0 675510.0 701220.0 560020.0 536990.0 501200.0 529200.0 363110.0 488240.0 816190.0 505370.0 True False 638038.1137041996 667532.3386473208 596119.7852636814 588025.3681480698 540641.5885620903 525897.066503227 399816.7024120951 486546.4093960723 667990.4704755432 500892.814971911 1.273801688970083 1.332684995061777 1.1901144664994057 1.1739544880096653 1.0793558470037314 1.0499193655487316 0.7982081005384674 0.971358332267866 1.333599625526676 1.0 18.934142391525263 -5.4815106688172355 1.2669947594486661 1.0171642729454724 1.2977316507168506 0.4095988133685503 0.1260109194960586 0.4660447502502676 1.5103179564443907 0.04835497684474027 0.09417703869898189 3.2998130153696537e-06 5.4815106688172355 0.2805673777713782 WSNS(ph)QPADLAHMGR ddPTM_KYSE-520_SHP099_60min_R1 9 WSNSQPADLAHMGR 14 0 Q9BRG2;Q9BRG2-2;M0QZQ6 Q9BRG2 SH2D3A SH2 domain-containing protein 3A 1 WS(0.165)NS(0.835)QPADLAHMGR;WSNS(1)QPADLAHMGR;WSNS(1)QPADLAHMGR;WS(0.001)NS(0.999)QPADLAHMGR;WS(0.025)NS(0.975)QPADLAHMGR;WS(0.089)NS(0.911)QPADLAHMGR;WS(0.004)NS(0.996)QPADLAHMGR;WS(0.042)NS(0.958)QPADLAHMGR;WS(0.009)NS(0.991)QPADLAHMGR 273.43 3.0804e-25 13040460000.0 4985410.0 5209890.0 4559070.0 4758120.0 5226960.0 4947130.0 4509780.0 4572410.0 5255900.0 4460960.0 True False 4708859.369131554 4959599.064195675 4852954.94696991 5210330.294219061 5638292.014665809 4916253.126625307 4965672.573611363 4556549.376918515 4301561.0504568815 4421439.364974358 1.065005981182072 1.1217159514805284 1.09759617770944 1.1784240072348653 1.2752164056191932 1.1119123707928127 1.1230896013068272 1.0305579248727164 0.9728870386718123 1.0 22.076084673481414 -7.311938135922292 2.165437358347249 0.9857818175788632 1.1457638607068585 0.58925387416362 0.05367941539059281 0.2515888531755783 2.2117965995342472 0.04243389351914262 0.016837352198775538 4.875979421685094e-08 7.311938135922292 0.15998204312799535 WSPAYSFSSDSPLDSS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 WSPAYSFSSDSPLDSSPK 18 0 E7ET49;Q8NCG7-2;Q8NCG7-4;Q8NCG7 E7ET49 DAGLB Sn1-specific diacylglycerol lipase beta 1 WSPAYSFSSDSPLDS(0.158)S(0.842)PK 124.46 9.526700000000001e-05 0.0 62724.0 49414.0 53318.0 60646.0 56650.0 61868.0 56278.0 55649.0 65156.0 58317.0 True False 59244.574682805986 47040.07726807385 56754.96359181632 66409.77760611514 61108.03270559148 61481.858863230686 61967.129460350574 55455.96660757424 53325.31284909698 57800.35674993945 1.0249863152076142 0.8138371441474387 0.9819137248123607 1.148950998579861 1.057225874400083 1.0636934150634823 1.0720890483157008 0.9594398672570882 0.9225775730035238 1.0 15.81879077676987 -4.996280154374043 24.94365569049589 1.0367401280411748 0.9140276291409949 0.25805746010914343 0.07595735034367787 130.8310598265746 877264.0572873399 0.02024904939113557 0.041838288162110854 1.0086020478898233e-05 4.996280154374043 -0.12271249890017988 WSTELVPEGLQS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 WSTELVPEGLQSPR 14 0 H3BV44;H3BRD5;B2RTY4-5;B2RTY4-2;B2RTY4;B2RTY4-4;H3BMM1 H3BV44 MYO9A Unconventional myosin-IXa 1 WSTELVPEGLQS(1)PR 124.09 7.6905e-05 154850000.0 114300.0 122150.0 92193.0 89584.0 108090.0 118600.0 103140.0 105960.0 136060.0 121400.0 True False 107959.55114859896 116281.73064911208 98135.90829401552 98098.03642558823 116596.06805202809 117859.77340756367 113566.39774939709 105592.44949124996 111354.93379348239 120324.4904477708 0.8972367200296677 0.9664011891210662 0.8155937991411094 0.8152790513429982 0.9690136032833556 0.9795160816303062 0.9438344374181481 0.877564069445068 0.9254552699877684 1.0 16.87657078820267 -5.781944533521964 24.997827847817273 0.9443532532267962 0.8761090617815861 0.34504937708037065 0.0507156424387897 333.00341104909273 405962.5026578964 0.017103454417627166 0.01941563237439429 1.652172794127171e-06 5.781944533521964 -0.0682441914452101 WT(ph)GT(ph)FRVSDK ddPTM_KYSE-520_SHP099_60min_R1 3 WTGTFRVSDK 10 1 Q96PS1 Q96PS1 FANCD2OS FANCD2 opposite strand protein 2 WT(0.994)GT(0.72)FRVS(0.286)DK;WT(0.986)GT(0.759)FRVS(0.255)DK;WT(0.991)GT(0.776)FRVS(0.233)DK 72.434 0.029858999999999997 2477840000.0 3734070.0 3163660.0 2560910.0 3082670.0 3371790.0 3352280.0 3256380.0 3781800.0 3537650.0 3484450.0 True False 3526933.6934160017 3011673.0248495257 2725990.3562008757 3375646.0299614654 3637130.690139215 3331357.177054869 3585566.669606174 3768681.818478752 2895301.936899258 3453580.4838610804 1.021239756796666 0.8720436772570868 0.7893229559698103 0.9774337229829129 1.0531478004163743 0.964609683377187 1.0382172028021 1.0912390303599904 0.8383478973283777 1.0 21.719661414608083 -5.501392359918983 24.18171188289624 1.0036969277776768 0.8905516017168451 0.23892099399313949 0.08237209212057237 653.764787059419 735774.9131319191 0.022899347377904344 0.03356109367814419 3.1521555465522396e-06 5.501392359918983 -0.11314532606083172 WTDGS(ph)LS(ph)PPAKEPLASDSR ddPTM_KYSE-520_SHP099_60min_R1 1 WTDGSLSPPAKEPLASDSR 19 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 2 WT(0.029)DGS(0.97)LS(0.996)PPAKEPLAS(0.005)DSR 58.015 0.046262 0.0 258940.0 244510.0 229940.0 254430.0 280730.0 264380.0 216290.0 260330.0 324420.0 259930.0 True False 244576.0820159075 232763.37258300732 244762.30031700808 278610.950702831 302821.85386479594 262729.90635321854 238154.7039869796 259426.97599147868 265513.5059626749 257627.22242247983 0.9493409885653702 0.9034890427895133 0.9500638093113672 1.0814499651203016 1.1754264592745636 1.0198064625421102 0.9244159128356108 1.0069858827497953 1.0306112198316624 1.0 17.97492551967077 -5.110049710465612 5.540693100158536 1.0347863584494947 0.9265213675518901 0.36159669885746515 0.06121675168132894 0.26898167106389204 11.415018422071386 0.01890331251967497 0.03357502804895231 7.761582704681462e-06 5.110049710465612 -0.10826499089760466 WTDGSLS(ph)PPAKEPLASDSR ddPTM_KYSE-520_SHP099_60min_R1 3 WTDGSLSPPAKEPLASDSR 19 1 O15085;O15085-2 O15085 ARHGEF11 Rho guanine nucleotide exchange factor 11 1 WTDGSLS(1)PPAKEPLASDSR;WTDGS(0.005)LS(0.995)PPAKEPLASDSR;WTDGS(0.286)LS(0.714)PPAKEPLASDSR 185.99 1.6244e-12 4223450000.0 4485590.0 4192080.0 3920660.0 3734130.0 3931590.0 4219110.0 3734580.0 4265290.0 5415540.0 3847470.0 True False 4236765.380898019 3990686.1843596366 4173392.016877799 4089020.5924928817 4240983.76531291 4192776.969490606 4112107.79238843 4250494.704516168 4432214.450653798 3813384.409086363 1.1110249915541803 1.0464945980402098 1.094406324978312 1.0722812477938874 1.1121311964269016 1.099489723485585 1.0783355023402 1.1146252904344702 1.1622784317502621 1.0 21.862640538921926 -5.752182394864845 24.93710211886515 1.0996515480266928 1.0795373144189373 0.015178954027936564 0.04128431415334498 659.5422362877985 1776710.4513535562 0.011655780101732663 0.01485681376189347 1.769365704580413e-06 5.752182394864845 -0.02011423360775555 WTDLFDNK ddPTM_KYSE-520_SHP099_60min_R1 1 WTDLFDNK 8 0 A0A494C1B8;A0A494C0U1;Q5VZU9;P29144;A0A494C0A3 A0A494C1B8 TPP2 Tripeptidyl-peptidase 2 0 96.25299999999999 0.040513 0.0 270100.0 273540.0 190360.0 183220.0 270590.0 276140.0 195240.0 183060.0 203640.0 220180.0 False True 255117.014568999 260398.72780808902 202630.91018676886 200633.17371289816 291883.89355350373 274416.507831068 214976.76455877713 182425.00758652508 166664.1093466467 218229.37649744775 1.1690314964171777 1.193234073191491 0.9285226097373681 0.9193683129789111 1.3375096343040571 1.2574682301503866 0.9850954441108039 0.8359324052261983 0.7637106975311175 1.0 17.735485794588346 -7.007630032227747 4.783699480670158 0.8572923742206748 1.1275392915401836 0.44676197196186185 0.1341929008578298 0.19089717313317955 11.927268594280466 0.06754874096816908 0.041224160171908025 9.825846330234901e-08 7.007630032227747 0.2702469173195088 WTEMIRAS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 WTEMIRASR 9 1 E9PFH7;A0A087WYG2;A0A669KB35;Q9UPT6;A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 E9PFH7;A0A087X2D8;O60271 MAPK8IP3;SPAG9 C-Jun-amino-terminal kinase-interacting protein 3;C-Jun-amino-terminal kinase-interacting protein 4 1 WTEMIRAS(1)R 55.401 0.04215 350680000.0 257620.0 745870.0 1324400.0 64551.0 169080.0 613370.0 153260.0 126030.0 154130.0 534370.0 True False 243329.305047262 710037.2856263047 1409772.9431149247 70685.90763203424 182385.63406639738 609541.7303119509 168753.0164734591 125592.83134562326 126143.87730111305 529635.8975335696 0.4594275164889842 1.3406139744923555 2.661777552616833 0.13346132307346859 0.3443604085669766 1.1508693673342199 0.3186208058390965 0.23713051160332818 0.23817093570988124 1.0 19.014641382530854 -5.305099294061687 24.99999656509837 0.4716174577840483 1.4726100356601273 0.37646137417345005 0.5883951246595406 470.17735855229563 269226.10952693655 0.16828344860299804 0.24960630961002805 4.953369274766656e-06 5.305099294061687 1.000992577876079 WTETYVR ddPTM_KYSE-520_SHP099_60min_R1 1 WTETYVR 7 0 P55884;P55884-2;C9JZG1;C9JQN7 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 0 103.91 0.05709500000000001 0.0 190210.0 179210.0 150100.0 118640.0 185360.0 182890.0 155770.0 142630.0 157520.0 145110.0 False True 179658.67212576553 170600.48260030578 159775.68616849137 129915.50992958344 199946.77744586836 181748.51567039927 171516.75176869848 142135.24982009223 128918.33875605866 143824.4382938716 1.2491526075608588 1.1861717286997056 1.1109077710564539 0.9032923157616057 1.3902142071107826 1.263683125249123 1.1925424761141368 0.988255205486512 0.8963590630727456 1.0 17.133949310226644 -7.319220513200289 4.44211995203468 0.9486449589001761 1.1827176995682263 0.42433301795809486 0.11966770848466163 0.23218570799311214 9.549284846969414 0.0732310087621122 0.03401757955711248 4.794899256122009e-08 7.319220513200289 0.23407274066805017 WTKPSSFS(ph)DSER ddPTM_KYSE-520_SHP099_60min_R1 2 WTKPSSFSDSER 12 1 H0Y9B7;Q8NC56-2;Q8NC56 H0Y9B7 LEMD2 LEM domain-containing protein 2 1 WTKPSS(0.005)FS(0.988)DS(0.007)ER;WTKPSSFS(0.996)DS(0.004)ER 207.06 5.239199999999999e-09 2733900000.0 3165500.0 3992600.0 2866320.0 3934900.0 3591600.0 3313200.0 3695300.0 4356400.0 5172100.0 3050650.0 True False 2989903.4047321957 3800789.502985223 3051087.5734741534 4308871.712929178 3874238.486591395 3292521.089830865 4068856.9866525736 4341288.665191405 4232977.018030799 3023623.6143697873 0.9888477489468808 1.2570312934857206 1.0090831276002223 1.425068812285776 1.2813230020360524 1.0889321918849757 1.3456889830186896 1.4357900383365867 1.3999682360970966 1.0 21.527847131013406 -3.0176912184241504 0.5805273519381129 1.2955409885247506 1.2077582182000077e-07 0.1978634067095022 0.15649856090333172 21.721955744360905 1.8348742535062323 0.07441202655604554 26.05707842241687 0.0009600830039400631 3.0176912184241504 -1.2955408677489288 WTPKS(ph)PLDPDSGLLSCTLPNGFGGQSGPEGER ddPTM_KYSE-520_SHP099_60min_R1 4 WTPKSPLDPDSGLLSCTLPNGFGGQSGPEGER 32 1 Q9H4L4;A0A087X0R7 Q9H4L4 SENP3;SENP3-EIF4A1 Sentrin-specific protease 3 1 WT(0.001)PKS(0.999)PLDPDSGLLSCTLPNGFGGQSGPEGER;WT(0.001)PKS(0.997)PLDPDS(0.002)GLLSCTLPNGFGGQSGPEGER;WT(0.096)PKS(0.904)PLDPDS(0.001)GLLSCTLPNGFGGQSGPEGER;WT(0.118)PKS(0.849)PLDPDS(0.028)GLLS(0.002)CT(0.002)LPNGFGGQSGPEGER 234.14 4.0796e-31 5430300000.0 1871290.0 2021600.0 1854240.0 1434822.0 1617290.0 1976880.0 1567180.0 1804210.0 2449300.0 1829120.0 True False 1767485.813375868 1924479.3015165355 1973767.2772888963 1571187.0514850346 1744561.5218786614 1964541.558633597 1725605.8486028675 1797951.6166157809 2004568.8618284315 1812915.4198338278 0.9749411329613359 1.0615383820238748 1.088725516753458 0.8666631847772854 0.9622961461922853 1.0836366314395778 0.9518402401591558 0.9917460003625439 1.105715600351709 1.0 20.789880188155443 -7.7180474895476685 24.982151364634323 1.0528583305082626 0.9986286915754027 0.0948620056677304 0.06813361969777615 301.3119189696894 173475.43338909847 0.047002419956926264 0.017764914487784958 1.9140466150213512e-08 7.7180474895476685 -0.054229638932859925 WVEENVPSSVTDVALPALLDS(ph)DEER ddPTM_KYSE-520_SHP099_60min_R1 13 WVEENVPSSVTDVALPALLDSDEER 25 0 Q8NBN3-3;Q8NBN3 Q8NBN3-3 TMEM87A Transmembrane protein 87A 1 WVEENVPSSVTDVALPALLDS(1)DEER;WVEENVPSSVTDVALPALLDS(1)DEER;WVEENVPSSVTDVALPALLDS(1)DEER;WVEENVPSSVTDVALPALLDS(1)DEER;WVEENVPSSVTDVALPALLDS(1)DEER;WVEENVPSSVTDVALPALLDS(1)DEER;WVEENVPSSVTDVALPALLDS(1)DEER;WVEENVPSSVTDVALPALLDS(1)DEER;WVEENVPSSVTDVALPALLDS(1)DEER;WVEENVPSSVTDVALPALLDS(1)DEER;WVEENVPSSVTDVALPALLDS(1)DEER;WVEENVPSSVTDVALPALLDS(1)DEER;WVEENVPSSVTDVALPALLDS(1)DEER 191.11 2.2120999999999998e-15 3461970000.0 1168272.0 1325192.0 1065600.0 1189808.0 1158459.0 1271425.0 1102890.0 1322449.0 1623425.0 1159224.0 True False 1103465.6232675062 1261527.7871662558 1134290.2810202842 1302886.994591181 1249623.1325699345 1263489.5649638437 1214380.884369134 1317861.7330809177 1328651.9432139061 1148954.1772226244 0.9604087309512395 1.0979791989753294 0.9872371792600229 1.133976463483217 1.0876179027353883 1.0996866454831875 1.0569445748521198 1.147009827899834 1.156401159901491 1.0 20.131889830657258 -5.263124300235833 24.987048089371267 1.1015070282743291 1.0234854522057528 0.31979930898183884 0.054282388337929206 175.9278838668765 2608987.392799344 0.014434443355603808 0.022684431980834845 5.4560168106458945e-06 5.263124300235833 -0.07802157606857629 WVNPHKL ddPTM_KYSE-520_SHP099_60min_R1 2 WVNPHKL 7 1 P11413;P11413-3;P11413-2 P11413 G6PD Glucose-6-phosphate 1-dehydrogenase 0 ; 85.359 0.020912 3441300000.0 5091000.0 4471600.0 3276700.0 2893600.0 5165600.0 4217000.0 3246500.0 3438400.0 3792300.0 3102200.0 False True 4808592.081343106 4256777.623991557 3487921.3249053676 3168606.874007439 5572103.331756457 4190680.138783277 3574687.902786674 3426472.9929285916 3103713.9161033602 3074716.921475079 1.5639137534118783 1.3844453758524837 1.1343877872282486 1.0305361289934023 1.8122329547928822 1.362948279730682 1.1626071583434539 1.1144027500537381 1.0094307851320408 1.0 21.55202216196034 -6.944277749482749 2.738966676951416 1.050444432160172 1.3735097113365682 0.3684561174099964 0.20305221569160595 0.3521539257513291 5.335051027236857 0.10868778152890358 0.06455021081382628 1.136899958203211e-07 6.944277749482749 0.32306527917639616 WVPEITHHCPK ddPTM_KYSE-520_SHP099_60min_R1 1 WVPEITHHCPK 11 0 A0A494C1M1;Q5JYX0;A0A494BZX6;A0A590UJK8;P60953-1;P60953 A0A494C1M1 CDC42 Cell division control protein 42 homolog 0 134.75 0.00013051 543360000.0 468710.0 522560.0 331640.0 498850.0 715410.0 554400.0 497270.0 559250.0 581530.0 397660.0 False True 442709.7219497795 497455.4332214494 353018.0450427612 546260.5540152792 771708.6968739127 550939.7839557615 547538.9044875182 557310.0922799316 475938.81117833115 394137.04177479824 1.1232380492740763 1.2621382425295746 0.895673351210842 1.3859660374865277 1.9579704901597428 1.3978381262387336 1.3892094537015647 1.4140007997481423 1.2075465148750792 1.0 18.588337817603325 -5.423457508833938 8.099542799618924 1.4378372804498796 1.1128499811989152 0.22986450817899562 0.24279393114353484 0.41272931547290764 30.264850746255608 0.06898880352560856 0.10239544035066789 3.7717464579458814e-06 5.423457508833938 -0.32498729925096437 WVSELS(ph)YVEEK ddPTM_KYSE-520_SHP099_60min_R1 3 WVSELSYVEEK 11 0 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 1 WVSELS(1)YVEEK;WVSELS(1)YVEEK;WVSELS(1)YVEEK 237.87 3.5849000000000003e-14 249364000.0 383174.0 337405.0 276125.0 309954.0 271788.0 294856.0 323317.0 360977.0 301795.0 377477.0 True False 361918.5743815685 321195.55734476977 293924.4593156206 339411.93496893154 293176.16933781654 293015.6943327204 356001.03762984043 359724.85503966495 246996.63563283836 374132.847452662 0.9673531122587709 0.858506702984452 0.7856152201466621 0.9071963001374168 0.7836151552421798 0.783186230045719 0.9515364396730341 0.961489635269675 0.6601843097032268 1.0 18.51319110906845 -6.761772786481664 24.999754021513812 0.890093382360475 0.8450614421942407 0.04535461491053894 0.101953490441637 35.42032971504392 2655491.449641594 0.040234663380638726 0.029024528068738672 1.7307215986546645e-07 6.761772786481664 -0.04503194016623424 WVTYFNKPDIDAWELRK ddPTM_KYSE-520_SHP099_60min_R1 2 WVTYFNKPDIDAWELRK 17 2 H3BRI0;H3BNX8;P20674 H3BRI0 COX5A Cytochrome c oxidase subunit 5A, mitochondrial 0 ; 92.65 0.001782 80987000.0 73926.0 127803.0 88975.0 84996.0 152198.0 124910.0 89149.0 65863.0 94648.0 56540.0 False True 69825.1774121726 121663.15204378612 94710.4708650335 93073.99428502067 164175.11671183803 124130.39035698818 98161.05093039549 65634.53662553975 77462.30908191626 56039.09958745435 1.246008196530777 2.171040451032215 1.6900783838831812 1.6608759771339623 2.929653008710947 2.215067538036918 1.75165289330186 1.171227537714285 1.3822903946025926 1.0 15.7741461548908 -7.133237007369825 3.4823787932246058 1.204063304123395 2.0077622929209755 0.413458998023597 0.42471857132943336 0.2628965853893553 5.802702493139293 0.23124504798066306 0.12464739542854963 7.358054370718594e-08 7.133237007369825 0.8036989887975805 WWEEERYPEGIK ddPTM_KYSE-520_SHP099_60min_R1 2 WWEEERYPEGIK 12 1 P11387 P11387 TOP1 DNA topoisomerase 1 0 ; 150.21 2.0356e-05 730860000.0 770200.0 724030.0 425310.0 393040.0 633150.0 673620.0 622090.0 502920.0 487390.0 592980.0 False True 727475.4706443648 689246.5120088129 452726.1631200603 430394.4034282146 682975.3028692892 669415.687713349 684976.9282133254 501175.4879024103 398892.2621020531 587726.6585314588 1.2377785830952328 1.1727331098627034 0.7703005411585011 0.7323036945501719 1.162062827940843 1.1389915328768734 1.1654685358749322 0.852735673339521 0.6787037074322227 1.0 19.16478581305421 -4.609925033205564 7.696890683865146 0.9486742088296002 1.2215819317132501 0.2829636251997961 0.17101785783711665 0.3043618614201542 22.65043479494074 0.04807688919712667 0.12856578641517002 2.4551326777864085e-05 4.609925033205564 0.27290772288364995 WWNHIDEDGK ddPTM_KYSE-520_SHP099_60min_R1 1 WWNHIDEDGK 10 0 C9JPH1;K7ENL4;J3QL63;J3QL47;A0A0A6YYB9;J3KS67;C9JYS5;Q96ET8-2;Q96ET8-3;Q9NYZ1;Q96ET8 C9JPH1 TVP23C;TVP23B;TVP23C-CDRT4 Golgi apparatus membrane protein TVP23 homolog;Golgi apparatus membrane protein TVP23 homolog C;Golgi apparatus membrane protein TVP23 homolog B 0 96.229 0.0018986 0.0 254430.0 253950.0 220970.0 239320.0 344090.0 337850.0 272690.0 342330.0 300420.0 266650.0 False True 240316.26070636933 241749.86081327856 235214.07976450076 262064.90084581834 371167.9253957103 335741.35283090547 300256.16639793525 341142.5371304223 245871.30097190934 264287.6884505611 0.9092979779545199 0.9147223702722779 0.8899925726525132 0.9915895151311275 1.404408686502787 1.2703631970117701 1.1360959269735436 1.2907999579187286 0.9303168922221786 1.0 18.011749694629984 -5.539433089380749 23.86410966129222 1.1904188124996797 0.9115285692291974 0.4664157253495793 0.13023111347791544 112.45256132061652 162105.98680738301 0.03772347749298474 0.04871743740862938 2.887798660532478e-06 5.539433089380749 -0.2788902432704823 WYMQFDDDEKQK ddPTM_KYSE-520_SHP099_60min_R1 1 WYMQFDDDEKQK 12 1 M0R0N4;M0QYZ2;P53680;X6R390;P53680-2 M0R0N4 AP2S1 AP-2 complex subunit sigma 0 86.699 0.016071000000000002 0.0 203990.0 193250.0 161140.0 102980.0 192580.0 189060.0 112190.0 139850.0 208720.0 159820.0 False True 192674.26805601656 183965.97992583635 171527.3422331158 112767.18823793402 207734.95036968784 187880.0064117537 123531.26006888546 139364.89299123528 170821.70940302545 158404.11913807865 1.2163463242269925 1.1613711873583021 1.082846476256074 0.7118955545571163 1.3114239168781223 1.186080307974702 0.7798487863892288 0.8798059908388673 1.0783918393821728 1.0 17.273250326159964 -6.748868940018648 24.99931838031162 0.9244954587523626 1.103519471608571 0.21491034762547334 0.1649905659487594 376.59074456369245 748941.1961773906 0.06612866959253305 0.050865504285269085 1.782916729104544e-07 6.748868940018648 0.1790240128562084 WYNEHLK ddPTM_KYSE-520_SHP099_60min_R1 1 WYNEHLK 7 0 Q9Y2L1;F2Z2C0;Q9Y2L1-2 Q9Y2L1 DIS3 Exosome complex exonuclease RRP44 0 101.64 0.0081911 459970000.0 939690.0 819890.0 573390.0 595800.0 1004000.0 858860.0 723770.0 769910.0 681990.0 712870.0 False True 887563.5224744275 780501.2537200202 610351.6368564372 652424.6528661974 1083009.0880214272 853499.5361620586 796935.7349144947 767239.3619083443 558157.807568845 706554.5264044681 1.256185459586654 1.1046582033687533 0.8638422287978388 0.9233889650191216 1.5328032693140756 1.2079740547489912 1.1279182357941442 1.08588839677058 0.7899713139044088 1.0 19.43044137531856 -7.617551646402698 5.825648958472746 0.8983505510631256 1.1393391664690793 0.23268710701880657 0.17872630672446355 0.3362582687928637 16.694370476612274 0.13558172565223442 0.04920498499963679 2.412394632991492e-08 7.617551646402698 0.24098861540595373 WYNHIK ddPTM_KYSE-520_SHP099_60min_R1 2 WYNHIK 6 0 P24534;C9JZW3;F2Z2G2 P24534 EEF1B2 Elongation factor 1-beta 0 ; 122.17 0.013546 5543000000.0 2331800.0 2093460.0 1443970.0 1402220.0 2236400.0 2017850.0 1672060.0 1697680.0 1589030.0 1400890.0 False True 2202450.4056719444 1992887.039252479 1537050.6166336893 1535486.5672071832 2412391.956624624 2005255.8496665452 1841088.1425330315 1691791.1443214903 1300502.2081865137 1388479.204475929 1.5862321873976086 1.4353020432918038 1.107002979719698 1.1058765318611603 1.737434704710009 1.4442102144579212 1.3259745890309795 1.2184490332068345 0.9366378725689151 1.0 20.405074139117506 -7.5359281830167 2.2562067554752336 0.9630800202189436 1.3887404394095755 0.45842094273791867 0.18259312059974114 0.3193735757613814 2.999419315481576 0.16663665813201187 0.05448153871188772 2.911198487773463e-08 7.5359281830167 0.4256604191906319 WYPEEYEFAPK ddPTM_KYSE-520_SHP099_60min_R1 1 WYPEEYEFAPK 11 0 H0YG54;H0YGR4;F5GYG5;Q9Y3B8-2;Q9Y3B8-3;Q9Y3B8 H0YG54 REXO2 Oligoribonuclease, mitochondrial 0 96.89 0.018352 0.0 22660.0 42644.0 24119.0 26051.0 37347.0 27501.0 41501.0 27362.0 42721.0 24484.0 False True 21403.004628409915 40595.318230051016 25673.749331764455 28526.879207481245 40285.996424637684 27329.35605802203 45696.32609072835 27267.08760833882 34963.94330877081 24267.090808263772 0.8819765334673517 1.6728547542347731 1.057965684251763 1.1755376626260807 1.6601081993280764 1.1261900437078947 1.8830574481209421 1.1236240810148306 1.440796656880865 1.0 14.566713544978828 -4.2316720100920024 23.258616502096586 1.3577151898561646 0.8819745865182145 0.19009065541824177 0.28862478434614436 7105.920546705064 5551953.450096397 0.06706513202737548 6.506063010295924 5.865809977157758e-05 4.2316720100920024 -0.4757406033379501 Y(ph)ATPQVIQAPGPR ddPTM_KYSE-520_SHP099_60min_R1 2 YATPQVIQAPGPR 13 0 A0A5F9ZHD0;A0A5F9ZHP4;C9J1X3;A0A5F9ZI29;A0A5F9ZHJ2;Q07912;A0A5F9ZGX5;A0A499FJ16;Q07912-3 A0A5F9ZHD0 TNK2 Activated CDC42 kinase 1 1 Y(0.999)AT(0.001)PQVIQAPGPR;Y(0.965)AT(0.035)PQVIQAPGPR 146.71 6.7634e-05 2650100000.0 2124040.0 2134200.0 1887410.0 1591820.0 1726050.0 2008440.0 1718590.0 2014880.0 2417200.0 1988610.0 True False 2006215.2670312366 2031669.8285004923 2009075.4685627725 1743106.0942018651 1861880.3151189073 1995904.5809670086 1892321.8490220665 2007890.8515565265 1978297.412653282 1970992.462515168 1.017870593209231 1.0307851841847708 1.0193217410882471 0.8843798884839474 0.9446410123471383 1.0126393778391474 0.9600857867347141 1.018720715448233 1.003706229362639 1.0 20.910490828550433 -7.275799297738652 23.990622484621486 1.0084101048796617 0.9808053049869301 0.07484432997773749 0.0419558450693215 1498.0399945437878 2502700.4869636693 0.02508892386435302 0.012141588686301476 5.2990827596449376e-08 7.275799297738652 -0.02760479989273157 Y(ph)DIEFEDKEMAPEK ddPTM_KYSE-520_SHP099_60min_R1 1 YDIEFEDKEMAPEK 14 1 P32004-3;P32004-2;P32004 P32004-3 L1CAM Neural cell adhesion molecule L1 1 Y(1)DIEFEDKEMAPEK 41.092 0.06804400000000001 0.0 11623.0 10793.0 11242.0 9285.7 11305.0 11996.0 9108.0 13236.0 13882.0 13226.0 True False 10978.249020123938 10274.488079376717 11966.677307835973 10168.210136152493 12194.639183348841 11921.128514309738 10028.725525513937 13190.087405305621 11361.378736742035 13108.8279296723 0.837469915618793 0.783783884760593 0.9128716443633357 0.77567652811556 0.930261595374659 0.9093969787585539 0.7650360184233984 1.0061988360873506 0.8666967632571597 1.0 13.678251078408795 -13.999993912951695 0.05793011874255699 1.5502060290417699 0.6289313458544638 0.3229595901478639 0.06890370916623473 484.32613913552666 2.050671968905015 37.745395342200354 6.671738672857776 1.0000140160449122e-14 13.999993912951695 -0.9212746831873061 Y(ph)DKKY(ph)S(ph)WDVKSLVMGK ddPTM_KYSE-520_SHP099_60min_R1 1 YDKKYSWDVKSLVMGK 16 3 Q08623-3;Q08623;Q08623-4 Q08623-3 HDHD1 Pseudouridine-5-phosphatase 3 Y(1)DKKY(1)S(1)WDVKSLVMGK 57.794 0.052021000000000005 0.0 46547.0 54258.0 50772.0 44348.0 45693.0 57918.0 38459.0 60467.0 70471.0 57327.0 True False 43964.94512085594 51651.36423708159 54044.84435807225 48562.820586287635 49288.77914239348 57556.51227840876 42346.81104366934 60257.254090103874 57675.24282934364 56819.12737973112 0.7737701571344334 0.9090488822872522 0.9511734313848591 0.8546914186438433 0.867468076603656 1.0129777582423887 0.7452914713149142 1.0605100231018194 1.0150673811635818 1.0 15.794089054536924 -7.292784709902374 24.99864368857768 1.028341560132698 0.8822547132131121 0.4599621589468428 0.0748843885620805 630.0553468505336 502480.842426541 0.03914493788289365 0.018807119852000825 5.0958342106884926e-08 7.292784709902374 -0.14608684691958584 Y(ph)FTTNK ddPTM_KYSE-520_SHP099_60min_R1 1 YFTTNK 6 0 P63010-2;A0A087WYD1;A0A087X253;A0A087WU93;P63010;A0A087WZQ6;K7EKZ5;K7ERB2;A0A087WXS3;K7EJX1;K7EN71 P63010-2 AP2B1 AP-2 complex subunit beta 1 Y(0.904)FT(0.094)T(0.001)NK 85.84899999999999 0.050541 228270000.0 545280.0 514390.0 531570.0 506280.0 556350.0 527150.0 515780.0 573270.0 670130.0 564530.0 True False 515032.23141126905 489677.93228486844 565835.8527420714 554396.6989813673 600131.5798015154 523859.8613136365 567920.0759277097 571281.4601722244 548451.2846025752 559528.7033976939 0.9204750860568482 0.8751614158689944 1.0112722534269962 0.9908279872235992 1.072566208234294 0.936251988740772 1.0149972154762745 1.0210047432833433 0.9802022331868733 1.0 19.093852616697166 -4.76656016861375 24.999940323757336 1.0041791540241354 0.8978182381562029 0.6070807028985545 0.03396853559293289 69.60546653645623 339823.7738654291 0.008501099026946365 0.018599040392687026 1.711748008965431e-05 4.76656016861375 -0.1063609158679325 Y(ph)FYDLY(ph)GR ddPTM_KYSE-520_SHP099_60min_R1 1 YFYDLYGR 8 0 M0R2J8-3;M0R2J8 M0R2J8-3 DCDC1 2 Y(0.5)FY(0.5)DLY(1)GR 51.854 0.05156 175440000.0 52577.0 61132.0 60956.0 69911.0 59776.0 61204.0 64626.0 65730.0 83602.0 59622.0 True False 49660.44900034895 58195.126958997265 64885.321293048386 76555.32042049141 64480.03112108447 60822.00313352891 71159.02676897928 65501.99797149727 68421.9842349163 59093.7954652141 0.8403665496419477 0.9847925065712552 1.0980056498696806 1.2954882964922456 1.0911472281221302 1.029245162790942 1.2041708644500158 1.1084412069970255 1.1578539455160446 1.0 15.850719042583947 -4.531121014347043 2.3321308817622413 1.1324568318325616 0.8375756870946205 0.5599318776353466 0.07977851725472433 0.2558231541322054 2.384015239840802 0.021382250888833342 0.12099083922413344 2.9436012972811895e-05 4.531121014347043 -0.29488114473794114 Y(ph)GKGLRHMIGGFS(ph)LHQR ddPTM_KYSE-520_SHP099_60min_R1 1 YGKGLRHMIGGFSLHQR 17 2 P59923 P59923 ZNF445 Zinc finger protein 445 2 Y(1)GKGLRHMIGGFS(1)LHQR 58.997 0.024162 2520100000.0 173860.0 190610.0 176030.0 388810.0 181560.0 173620.0 194970.0 174470.0 238260.0 167750.0 True False 164215.6392186825 181452.80948855696 187377.17545795848 425762.385500011 195847.73906491065 172536.3731789309 214679.4703238312 173864.8042916042 194997.99004582607 166263.8655075251 0.987680869306206 1.0913544499562018 1.1269867621926413 2.560763183271118 1.177933271712888 1.0377262230266258 1.2911973967916366 1.0457161197406124 1.1728224256701192 1.0 17.343115133034534 -5.972316481092734 24.99996441534632 1.1219409748439844 1.4535866991603668 0.12544274649902065 0.41710866011398473 499.0557414194469 450676.6144384557 0.13684170811658897 0.15516097648081298 1.0658191494826376e-06 5.972316481092734 0.3316457243163824 Y(ph)HGFGNVHAYLK ddPTM_KYSE-520_SHP099_60min_R1 2 YHGFGNVHAYLK 12 0 Q9BWT1-3;Q9BWT1-5;Q9BWT1;Q9BWT1-6;Q9BWT1-2 Q9BWT1-3 CDCA7 Cell division cycle-associated protein 7 1 Y(0.998)HGFGNVHAY(0.002)LK;Y(0.999)HGFGNVHAY(0.001)LK 48.004 0.037251 219342000.0 377390.0 334540.0 295490.0 153079.0 417220.0 397700.0 293850.0 375000.0 315550.0 285810.0 True False 356455.4243916862 318468.1962452222 314537.7582007165 167627.58213512035 450052.8403429278 395217.8067806754 323555.2256996347 373699.21252565837 258254.07436817084 283277.9457568149 1.2583239526090457 1.1242251683038431 1.1103503216969004 0.5917424375811567 1.5887323636880784 1.3951591103387813 1.1421829003850394 1.3191962809786373 0.9116631853503828 1.0 18.11185876134238 -3.958788294414541 16.497967673893612 1.1494014519997722 1.779296210399897 0.01689715252245938 0.2596677799956579 34955857.47219523 371234714.74933785 0.06578814090368973 673504990.6801151 0.00010995417025446624 3.958788294414541 0.6298947584001249 Y(ph)KGDY(ph)YLCT(ph)ETNFMNKVDIETLEK ddPTM_KYSE-520_SHP099_60min_R1 1 YKGDYYLCTETNFMNKVDIETLEK 24 2 H0YCN8;Q9BYV7-6;Q9BYV7-4;Q9BYV7-2;Q9BYV7 H0YCN8 BCO2 Beta,beta-carotene 9,10-oxygenase 3 Y(0.849)KGDY(0.473)Y(0.473)LCT(0.602)ET(0.602)NFMNKVDIET(0.001)LEK 41.188 0.056522 1841900000.0 196570.0 223930.0 207950.0 300080.0 170280.0 190830.0 186960.0 228780.0 270160.0 146530.0 True False 185665.87024741998 213172.06667421726 221354.78973176435 328599.512977658 183680.0672393313 189638.9591852057 205859.7413537642 227986.41557765324 221105.75417938567 145231.8581986151 1.278410071662847 1.467805131176446 1.5241476111188057 2.2625856134696996 1.264736742458638 1.3057669407896761 1.4174558110537707 1.5698099466982325 1.5224328664652043 1.0 17.147998433443256 Y(ph)LQAIMDS(ph)NAQS(ph)HK ddPTM_KYSE-520_SHP099_60min_R1 1 YLQAIMDSNAQSHK 14 0 Q13614;C9JEX3;Q13614-2 Q13614 MTMR2 Myotubularin-related protein 2 3 Y(1)LQAIMDS(1)NAQS(1)HK 55.105 0.03853 219640000.0 240610.0 250300.0 213120.0 197800.0 240410.0 240360.0 215870.0 221590.0 278170.0 226350.0 True False 227262.88365585622 238275.21229204052 226858.05620405634 216598.85252926146 259328.89925421413 238859.82408298517 237692.2462881746 220821.35600949504 227661.34009505366 224344.71509763552 1.0130075208455465 1.0620941624960607 1.0112030323750973 0.9654733896227373 1.1559394173442123 1.0647000263814221 1.0594956345850635 0.9842948870598217 1.0147836109978108 1.0 17.77535767319483 -7.258466414448711 24.930568413597072 0.999654435749375 1.0482749844791528 0.177639225346497 0.04702918283310547 470.3026359244964 3943889.968384233 0.02432121203037207 0.013244458639258433 5.514848490357748e-08 7.258466414448711 0.048620548729777835 Y(ph)LQAVVS(ph)S(ph)MPR ddPTM_KYSE-520_SHP099_60min_R1 2 YLQAVVSSMPR 11 0 O95248;O95248-5;O95248-4 O95248 SBF1 Myotubularin-related protein 5 3 Y(1)LQAVVS(1)S(1)MPR;Y(1)LQAVVS(1)S(1)MPR 50.897 0.043469 362880000.0 1441730.0 1245210.0 1176060.0 1189340.0 1296380.0 1267540.0 1146010.0 1250470.0 1425260.0 1214040.0 True False 1361754.3628824996 1185388.242501686 1251870.7093625318 1302374.5160118886 1398397.7306067918 1259628.8126899113 1261859.8747797795 1246132.4114318916 1166468.711880779 1203284.5501088279 1.131697704220784 0.9851271192624195 1.0403779465541294 1.0823495705102328 1.1621504909045142 1.046825385214152 1.0486795285999924 1.0356090845836825 0.9694038802170947 1.0 20.198546417563634 -7.400349044293158 1.6819783390343828 0.9858567190649482 1.0721885364882084 0.34823033142303317 0.04694563394269466 0.4869946530200641 2.4534841161551064 0.04130012680830773 0.014526413426797637 3.977873386962765e-08 7.400349044293158 0.08633181742326024 Y(ph)LRAFLPES(ph)GFT(ph)ILPCTRY(ph)SMETNGAK ddPTM_KYSE-520_SHP099_60min_R1 1 YLRAFLPESGFTILPCTRYSMETNGAK 27 2 Q86Y97 Q86Y97 SUV420H2 Histone-lysine N-methyltransferase SUV420H2 4 Y(0.695)LRAFLPES(0.623)GFT(0.682)ILPCT(0.682)RY(0.695)S(0.623)MET(0.001)NGAK 45.685 0.066345 379940000.0 42192.0 35015.0 33363.0 57707.0 36313.0 36152.0 35631.0 42318.0 43807.0 32393.0 True False 39851.52565233323 33332.82684141349 35513.632362687385 63191.45592975784 39170.6265072929 35926.36195809651 39232.9292050491 42171.20873509547 35852.75308460299 32106.023221372656 1.2412476430841322 1.038211011422435 1.1061361327069097 1.9682118677249296 1.220039811134797 1.118991340359484 1.2219803410262324 1.3134983565022316 1.116698659232769 1.0 14.97055635778315 -5.982571498418781 24.99989291901821 1.1771117632751718 1.337126007221771 0.1070390522175062 0.2468155822403712 698.0257390076574 1001261.1701348572 0.08137354172334318 0.09225151842745637 1.0409467212151208e-06 5.982571498418781 0.16001424394659924 Y(ph)LRAFLPESGFTILPCT(ph)RY(ph)S(ph)METNGAK ddPTM_KYSE-520_SHP099_60min_R1 1 YLRAFLPESGFTILPCTRYSMETNGAK 27 2 Q86Y97 Q86Y97 SUV420H2 Histone-lysine N-methyltransferase SUV420H2 4 Y(0.637)LRAFLPES(0.519)GFT(0.595)ILPCT(0.64)RY(0.828)S(0.78)METNGAK 51.758 0.047704 1313100000.0 77983.0 118610.0 73125.0 197260.0 106640.0 76968.0 89846.0 88073.0 115560.0 104190.0 True False 73657.12753474356 112911.79756276039 77838.75450413678 216007.53109161844 115031.96130139932 76487.61416217 98928.51049245999 87767.49531939274 94577.21703053669 103266.95765859328 0.7132690766223443 1.093397153579885 0.753762445113144 2.091739080817624 1.1139280551064732 0.740678488999769 0.9579880412428101 0.8499087927966011 0.9158516835870638 1.0 16.656019183162872 -6.019288393925916 24.679638942817817 0.8919879681865112 1.188082991229112 0.11646939964719816 0.3578965810845416 1423.75174394847 1821699.2073477895 0.12100571251256692 0.12287825816914215 9.565586560812076e-07 6.019288393925916 0.2960950230426008 Y(ph)MLVRY(ph)EDLARNPMKK ddPTM_KYSE-520_SHP099_60min_R1 1 YMLVRYEDLARNPMKK 16 3 O43916 O43916 CHST1 Carbohydrate sulfotransferase 1 2 Y(1)MLVRY(1)EDLARNPMKK 59.294 0.051749 0.0 333090.0 313690.0 250770.0 259270.0 303460.0 298870.0 296040.0 293020.0 357280.0 315730.0 True False 314612.83370154677 298619.86154171044 266935.0354461868 283910.9428476322 327340.57554878725 297004.6414698025 325966.61227197485 292003.58201138215 292406.9582958649 312932.8778342228 1.0053684223880557 0.9542617049650669 0.8530105155253022 0.9072582747218877 1.0460408564746495 0.9491001505669265 1.041650255888602 0.9331188976764275 0.934407916226586 1.0 18.255493715618965 -5.721949851401282 24.999577923648495 0.9818413659235088 0.9262120465503016 0.20739729599760837 0.05147276947696773 263.65710692922727 166911.8039700234 0.015760229919400036 0.020346025047245746 1.8969249491747954e-06 5.721949851401282 -0.05562931937320714 Y(ph)MQNLT(ph)VEQPIEVK ddPTM_KYSE-520_SHP099_60min_R1 1 YMQNLTVEQPIEVK 14 0 A0A087WYF1;A0A087WX80;P24043 A0A087WYF1 LAMA2 Laminin subunit alpha-2 2 Y(1)MQNLT(1)VEQPIEVK 49.5 0.042661000000000004 0.0 25169.0 33475.0 32185.0 19596.0 24012.0 38584.0 29023.0 35006.0 40709.0 29973.0 True False 23772.825396842396 31866.8107530006 34259.69659782077 21458.39794824777 25901.60779040887 38343.1829439919 31956.928077183908 34884.57235646181 33317.27179037832 29707.462538641124 0.8002307624193947 1.0726870634457846 1.1532353715252006 0.7223234875862042 0.8718889321737965 1.2906919564105521 1.0757205545783943 1.1742696741967344 1.1215118674993476 1.0 14.858537762263765 -6.245353354374772 24.958604517247476 1.1397857820893822 0.9338523711430763 0.372243511776267 0.13482686539862354 938.469408719363 1456102.1410712649 0.04585959636441278 0.04572213039270836 5.683902841147652e-07 6.245353354374772 -0.2059334109463059 Y(ph)PKT(ph)GT(ph)ANPKVTFK ddPTM_KYSE-520_SHP099_60min_R1 1 YPKTGTANPKVTFK 14 2 H0YK36;J3KPT0;Q6V1X1-6;Q6V1X1-4;Q6V1X1-2;Q6V1X1-5;Q6V1X1-3;Q6V1X1 H0YK36 DPP8 Dipeptidyl peptidase 8 3 Y(0.976)PKT(0.973)GT(0.998)ANPKVT(0.052)FK 56.851000000000006 0.03224 2914800000.0 1169900.0 1076700.0 831380.0 922950.0 858470.0 1394700.0 1223700.0 1842900.0 1942900.0 1838500.0 True False 1105003.3148621696 1024973.7158403507 884972.0850550334 1010666.8905049644 926026.7049738581 1385995.1599623018 1347403.5381611108 1836507.4100360947 1590118.3365232737 1822212.3203313574 0.6064075533531855 0.5624886323093051 0.4856580515788122 0.5546372830588596 0.5081881483522547 0.7606112331137502 0.7394327889935978 1.007844908930337 0.872630658228741 1.0 20.797259638037648 -6.774502484690879 1.251978245585001 0.964549192686829 0.5389473971336788 0.8807892140830619 0.06462840605566149 0.1394610330447555 0.4378463970273214 0.04037939297248362 0.022923308629428357 1.6807283098779557e-07 6.774502484690879 -0.42560179555315025 Y(ph)QKKLEVLT(ph)K ddPTM_KYSE-520_SHP099_60min_R1 1 YQKKLEVLTK 10 2 A0A087WUI6;Q8WXW3 A0A087WUI6 PIBF1 Progesterone-induced-blocking factor 1 2 Y(1)QKKLEVLT(1)K 69.672 0.019296 126890000.0 855860.0 840820.0 785410.0 651490.0 698220.0 849540.0 674740.0 721940.0 988140.0 788730.0 True False 808383.7396853876 800425.7451034498 836038.7853004313 713407.4137223882 753165.9416716342 844237.7057391371 742949.3040278079 719435.7586420634 808718.6849822988 781742.4658226549 1.034079348413927 1.0238995322598137 1.0694555072182736 0.9125862351249457 0.9634450917017171 1.0799435141990352 0.9503760336800642 0.9202976556799636 1.0345078083115977 1.0 19.576333884432767 -5.236722859950988 24.997128778388213 0.9790637944562994 1.0406202688108492 0.2548808926143038 0.048767386847422545 1153.2814817283506 1166372.83843126 0.013515082354371795 0.02339431926758281 5.7979857021526415e-06 5.236722859950988 0.061556474354549806 Y(ph)RVRDMTVPTAMWT(ph)GGQDWLS(ph)NPEDVK ddPTM_KYSE-520_SHP099_60min_R1 1 YRVRDMTVPTAMWTGGQDWLSNPEDVK 27 2 Q5VYY2-2;Q5VYY2 Q5VYY2-2 LIPM Lipase member M 3 Y(0.604)RVRDMT(0.487)VPT(0.544)AMWT(0.572)GGQDWLS(0.793)NPEDVK 43.15 0.06801 970090000.0 28266.0 35776.0 27997.0 41372.0 27999.0 28414.0 18710.0 26822.0 35220.0 35323.0 True False 26698.028633125952 34057.26725912921 29801.73141678383 45303.98244105462 30202.362007482006 28236.657686361847 20601.389392003257 26728.960742301868 28824.935823948592 35010.06570087816 0.7625815061654192 0.9727850141759358 0.8512332330766322 1.2940273471100128 0.862676530387786 0.8065296971337469 0.5884418946259363 0.7634650266203705 0.8233328114898559 1.0 15.09548214872067 -5.995296674799887 24.993295166909167 0.7759122705020005 0.9764126972135292 0.2056772203012387 0.1584258259137323 186.56710657501282 991398.6383101956 0.04940997011817637 0.05582315203361697 1.0108886611171393e-06 5.995296674799887 0.20050042671152868 Y(ph)S(ph)VKKINHT(ph)AS(ph)ENEEFNK ddPTM_KYSE-520_SHP099_60min_R1 1 YSVKKINHTASENEEFNK 18 2 Q9GZR1-2;Q9GZR1 Q9GZR1-2 SENP6 Sentrin-specific protease 6 4 Y(1)S(1)VKKINHT(1)AS(1)ENEEFNK 47.754 0.054648 463910000.0 343650.0 287840.0 289320.0 325210.0 322710.0 270580.0 262700.0 319620.0 398090.0 275120.0 True False 324587.0494507086 274011.73434335197 307970.0301283673 356117.86062204826 348105.4410312698 268891.2098534452 289256.2797049312 318511.31281986897 325806.8910322462 272682.6508401213 1.1903472716385604 1.00487410364809 1.129408230334887 1.3059791648822077 1.27659548548019 0.9860957747953715 1.0607799169244811 1.1680659251278065 1.1948207560270219 1.0 18.056863387586418 -6.259751963292912 24.998058932759108 1.091133313739071 1.1756596767113816 0.20167320572512637 0.09778704255151739 341.6513993099841 5061380.032690867 0.03662417649540894 0.03477441953023207 5.498548203751778e-07 6.259751963292912 0.08452636297231053 Y(ph)SES(ph)NFS(ph)VDDQDLSR ddPTM_KYSE-520_SHP099_60min_R1 1 YSESNFSVDDQDLSR 15 0 Q5TH69 Q5TH69 ARFGEF3 Brefeldin A-inhibited guanine nucleotide-exchange protein 3 3 Y(0.558)S(0.443)ES(0.999)NFS(0.991)VDDQDLS(0.009)R 52.00899999999999 0.068513 0.0 219750.0 163440.0 140440.0 153760.0 181730.0 185890.0 167120.0 156690.0 160980.0 175510.0 True False 207560.02943923557 155588.0970715583 149492.98711194488 168373.30417037016 196031.11709774323 184729.7915576057 184014.1205340237 156146.47896172098 131750.0899755608 173955.1179447136 1.1931815050431702 0.8944151739243872 0.8593767684343541 0.9679123337082991 1.1269062929211766 1.0619393883904957 1.0578252753247943 0.897625093222882 0.7573797858447235 1.0 17.408355599642615 -7.3834304549109895 5.263701201616063 0.8637402021681232 1.0148071190144587 0.24662425820094158 0.10928781480719858 0.3284005905739062 12.66521551087903 0.06477206565121461 0.02995666291999449 4.1358953857937995e-08 7.3834304549109895 0.15106691684633555 Y(ph)SPSQNS(ph)PIHHIPSR ddPTM_KYSE-520_SHP099_60min_R1 1 YSPSQNSPIHHIPSR 15 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 Y(0.845)S(0.153)PS(0.018)QNS(0.983)PIHHIPSR 177.67 3.4925000000000003e-08 2680100000.0 1735700.0 1785500.0 1730000.0 2729500.0 1651600.0 1700000.0 1961900.0 1884100.0 1850500.0 1615100.0 True False 1639417.2609678325 1699721.8999098598 1841518.568097867 2988910.859345904 1781571.5236814634 1689389.6694170188 2160227.9982988336 1877564.4968522463 1514495.847308829 1600791.4705287856 1.0241291830636052 1.0618009473453744 1.150380047620795 1.8671456678605267 1.1129316694153557 1.0553464961048091 1.349474955401437 1.1728976143482541 0.9460919021567182 1.0 20.61035395461237 -7.6667269680169445 4.494235338850564 0.9735704352345889 1.2364894974758205 0.15926273879293984 0.2332067745825989 0.4059870573461576 13.925307662249493 0.18724098689556673 0.06317346736554878 2.154135569717398e-08 7.6667269680169445 0.2629190622412316 Y(ph)VDSEGHLYTVPIR ddPTM_KYSE-520_SHP099_60min_R1 3 YVDSEGHLYTVPIR 14 0 Q03135 Q03135 CAV1 Caveolin-1 1 Y(0.866)VDS(0.134)EGHLYTVPIR;Y(0.999)VDS(0.001)EGHLYTVPIR;Y(0.673)VDS(0.327)EGHLYTVPIR 140.08 0.00011635 1420920000.0 1105655.0 1758100.0 1192519.0 2155090.0 1434217.0 942136.0 895298.0 1013745.0 1236494.0 818181.0 True False 1044322.1130814002 1673638.2370380985 1269390.6828378614 2359909.105648563 1547081.7183215402 936255.7797563943 985803.4591064544 1010228.5552048605 1011977.8590771587 810932.5528751863 1.2878039109155552 2.063843942513052 1.565346807619447 2.910117613704657 1.9077810020529011 1.1545421088805359 1.2156417393915904 1.24576150214104 1.2479186530238058 1.0 19.62922240160569 -6.238066068866834 6.244794188927741 1.1896633071623333 1.9891201189995364 0.4863847463953813 0.39673122808900935 0.1591451386960652 23.8951210481272 0.13521103562990083 0.13145143789751337 5.78008108812691e-07 6.238066068866834 0.7994568118372032 Y(ph)VEENVSQKSY(ph)T(ph)T(ph)IK ddPTM_KYSE-520_SHP099_60min_R1 1 YVEENVSQKSYTTIK 15 1 Q9UBY0 Q9UBY0 SLC9A2 Sodium/hydrogen exchanger 2 4 Y(0.676)VEENVS(0.318)QKS(0.133)Y(0.929)T(0.972)T(0.972)IK 44.44 0.043643 11694000.0 17752.0 19170.0 14259.0 13844.0 13878.0 18507.0 13293.0 19969.0 17752.0 16235.0 True False 16767.261172265342 18249.04442524337 15178.157955206658 15159.729597649626 14970.119644981445 18391.490948176925 14636.786167177948 19899.732199799648 14528.684291503001 16091.17053063887 1.0420162498644299 1.1341029784312917 0.9432600273737847 0.9421147808224575 0.930331302901622 1.1429554433692726 0.9096159996134738 1.2366864276224636 0.9028979131032904 1.0 13.973981656345714 Y(ph)VLARP ddPTM_KYSE-520_SHP099_60min_R1 1 YVLARP 6 1 Q13470-2;Q13470 Q13470-2 TNK1 Non-receptor tyrosine-protein kinase TNK1 1 Y(1)VLARP 63.581 0.034892 442700000.0 553320.0 526620.0 525830.0 441880.0 492220.0 472020.0 474800.0 452370.0 598370.0 511140.0 True False 522626.2365839267 501320.3847272642 559725.8431577467 483876.14234393346 530954.913651302 469073.94809307094 522797.41760145174 450800.8340539519 489721.0916801851 506611.69726090244 1.0316110729570795 0.9895554868506851 1.1048419256484139 0.9551223253630082 1.0480510349879721 0.9259042983594993 1.0319489668873827 0.889835028467161 0.9666596612908076 1.0 18.950520862552114 -6.13126460576358 1.184012975987356 0.9571976955997087 1.0305385179729736 0.22449336109398987 0.052737082320850066 0.649067244011554 1.8910956533700007 0.024032041220226445 0.024387689733241326 7.391547876128127e-07 6.13126460576358 0.07334082237326489 Y(ph)VLCPSTTPSPAQPADR ddPTM_KYSE-520_SHP099_60min_R1 1 YVLCPSTTPSPAQPADR 17 0 M0R0W6;P30530-2;P30530 M0R0W6 AXL Receptor protein-tyrosine kinase;Tyrosine-protein kinase receptor UFO 1 Y(1)VLCPSTTPSPAQPADR 133.71 0.00089771 0.0 365090.0 363570.0 357990.0 372150.0 333460.0 335440.0 324710.0 357460.0 495160.0 315900.0 True False 344837.72991112835 346103.5514703046 381066.6082042517 407519.0241090224 359701.4048721368 333346.39453484997 357534.8556642106 356220.05469179084 405251.42596781376 313101.37176648073 1.101361287450115 1.1054041364227487 1.2170710273619025 1.30155617591149 1.148833691921387 1.064659642511782 1.1419140505422938 1.1377147684854896 1.2943137990147835 1.0 18.25627030369386 -5.985047517482045 24.996621887353683 1.13382935763871 1.1843151654623039 0.0747379104328203 0.08743978411395104 755.1222810099913 1262359.2650855216 0.028075898970089278 0.031826090521951976 1.035028914817765e-06 5.985047517482045 0.05048580782359391 YACGLWGLS(ph)PASR ddPTM_KYSE-520_SHP099_60min_R1 4 YACGLWGLSPASR 13 0 Q15637-6;H7C561;H7C0N4 Q15637-6 SF1 Splicing factor 1 1 YACGLWGLS(0.997)PAS(0.003)R;YACGLWGLS(1)PASR;YACGLWGLS(0.975)PAS(0.025)R;YACGLWGLS(1)PASR 215.96 2.8406e-11 2188100000.0 1756910.0 1665540.0 1512410.0 1414060.0 1395990.0 1544970.0 1320430.0 1306060.0 1629530.0 1514420.0 True False 1659450.6999867472 1585524.95837349 1609902.3685415578 1548451.8372473568 1505846.470903419 1535327.2691524765 1453911.9505549378 1301529.582696697 1333648.4291084327 1501003.4170009326 1.1055609075843404 1.056310025956793 1.072550768577336 1.0316111340647232 1.0032265442221064 1.02286727116193 0.9686266760537524 0.8671063423008105 0.8885045923300547 1.0 20.517495830549723 -6.467751486554644 0.9458982335301221 0.9103625021740743 1.0707142984363545 0.6845797359260131 0.04056129792206099 0.3108564836560722 0.5783263507214356 0.0270627686846587 0.020264424834548312 3.406030349594607e-07 6.467751486554644 0.16035179626228013 YADEEIPRS(ph)PFK ddPTM_KYSE-520_SHP099_60min_R1 7 YADEEIPRSPFK 12 1 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 1 YADEEIPRS(1)PFK;YADEEIPRS(1)PFK;YADEEIPRS(1)PFK;YADEEIPRS(1)PFK;YADEEIPRS(1)PFK;YADEEIPRS(1)PFK;YADEEIPRS(1)PFK 200.77 2.1948e-08 13014700000.0 9162380.0 8313420.0 7676570.0 7939220.0 8309380.0 8481360.0 7867740.0 8686040.0 10413470.0 8486720.0 True False 8654124.516648304 7914030.824502167 8171413.985146278 8693761.081786476 8963280.932095101 8428424.686239257 8663087.940942805 8655910.154576967 8522646.350216195 8411534.263368255 1.0288401908242253 0.9408546142369429 0.9714534506186717 1.0335523591275497 1.0655940582837153 1.0020080073791722 1.0299058019260592 1.0290524752746897 1.0132094910831937 1.0 23.00393754129945 -5.260310735365462 24.955134390556605 1.0269386225768984 0.9764299355152846 0.3627612451834503 0.02669114994638546 92.61951652702318 2047872.7532138017 0.007181843882093995 0.01163487227535638 5.491478209490895e-06 5.260310735365462 -0.05050868706161382 YADLSHNR ddPTM_KYSE-520_SHP099_60min_R1 5 YADLSHNR 8 0 P54136-2;P54136 P54136-2 RARS Arginine--tRNA ligase, cytoplasmic 0 ;;;; 168.27 0.00025295 2469940000.0 6824990.0 6381050.0 4625970.0 3986360.0 6381590.0 6343320.0 4683540.0 5461810.0 5161000.0 5174350.0 False True 6446394.199419744 6074494.779848674 4924167.428013694 4365222.4558571605 6883784.826719773 6303728.9869449185 5156997.930145541 5442864.255906039 4223892.498222565 5128509.284583382 1.2569723172380727 1.1844562313865714 0.9601557011539488 0.8511678957039798 1.3422584312000483 1.229154250708743 1.005554956417413 1.0612955839365694 0.8236101884264593 1.0 22.29010810465446 -7.349293720374711 2.024970406138576 0.9252195887082691 1.1230035858220957 0.23101996218627896 0.14602211731052506 0.5772419746758137 4.362108941256981 0.11961610067890592 0.04504524895894514 4.474106108050956e-08 7.349293720374711 0.19778399711382655 YADLTEDQLPSCESLKDTIAR ddPTM_KYSE-520_SHP099_60min_R1 1 YADLTEDQLPSCESLKDTIAR 21 1 P18669 P18669 PGAM1 Phosphoglycerate mutase 1 0 77.39 0.020250999999999998 0.0 58838.0 58276.0 44476.0 26595.0 43736.0 46622.0 37108.0 40504.0 49989.0 46218.0 False True 55574.138849354924 55476.33348594066 47342.9941241161 29122.580803921686 47177.77437620033 46331.01480444721 40859.238779179956 40363.50107770465 40912.257720141046 45808.54447705988 1.213182813027065 1.2110477230666485 1.0334970181780092 0.6357456045892436 1.0298902729779187 1.0114055212483115 0.8919567134389427 0.8811347651073697 0.8931141163114055 1.0 15.483329102870595 -4.915764806487439 4.279564809953081 0.905318056368189 1.2082087376014872 0.5693342895695936 0.1054260354644995 0.14832543475773782 5.049424013857276 0.02833230490967345 0.06281873862516679 1.214046142892625e-05 4.915764806487439 0.3028906812332982 YADQEVPRS(ph)PFK ddPTM_KYSE-520_SHP099_60min_R1 2 YADQEVPRSPFK 12 1 Q14315;Q14315-2 Q14315 FLNC Filamin-C 1 YADQEVPRS(1)PFK;YADQEVPRS(1)PFK 153.72 8.1928e-06 1310560000.0 1758260.0 1473430.0 1360500.0 1392190.0 1509720.0 1515140.0 1426950.0 1527120.0 1764270.0 1500110.0 True False 1660725.8127955885 1402644.21113648 1448200.0068769658 1524503.3190228126 1628526.3748682374 1505683.4492473544 1571200.0316899547 1521822.7771524868 1443923.0416274236 1486820.1924679212 1.1169647958836284 0.9433852312755315 0.9740249790885264 1.0253447772271256 1.0953082175761302 1.012686979148516 1.0567518787069836 1.0235419083369228 0.9711483936942678 1.0 20.50379875597487 -4.228935231885892 23.697318180358437 1.0154448731418269 1.116965177926747 0.3628188690645723 0.04167075946351494 9016.708177526973 6573456.314476802 0.011050160748193726 1.5109959855199548 5.902891058388923e-05 4.228935231885892 0.10152030478492025 YAEEDRR ddPTM_KYSE-520_SHP099_60min_R1 1 YAEEDRR 7 1 P38646;H0Y8S0 P38646 HSPA9 Stress-70 protein, mitochondrial 0 91.626 0.017411000000000003 728120000.0 452020.0 464140.0 317530.0 280010.0 498670.0 492340.0 382380.0 468080.0 486260.0 408560.0 False True 426945.5495204703 441842.0177116569 337998.4918659636 306622.0662119238 537912.4919558213 489267.12343575014 421034.70206917205 466456.3397306928 397967.4416170716 404940.47625487036 1.0543415009265458 1.0911283105064573 0.8346868532184634 0.7572028092813701 1.328374226579558 1.2082445498182415 1.0397446705331872 1.151913347968466 0.982780099677144 1.0 18.627350330772042 -5.757640122307928 24.999996777213138 1.126653652170405 0.9384210118421171 0.3191900958329852 0.13139188892157838 127.06169358010544 836089.312724225 0.04175679926454087 0.051852137828775555 1.7472694262755288e-06 5.757640122307928 -0.1882326403282878 YAGALRAS(ph)GEMASAQYITAALR ddPTM_KYSE-520_SHP099_60min_R1 1 YAGALRASGEMASAQYITAALR 22 1 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 1 YAGALRAS(1)GEMASAQYITAALR 179.54 2.2324e-10 165010000.0 51747.0 38921.0 43192.0 46814.0 45418.0 42393.0 35949.0 39940.0 57745.0 34394.0 True False 48876.49075491297 37051.17673838794 45976.22542964342 51263.18848485769 48992.138206929456 42128.40956211509 39583.07574843002 39801.457462066086 47259.96363299012 34089.29591812711 1.4337782414837943 1.0868859488143856 1.3486997660516478 1.503791354564126 1.437170727274473 1.2358251594076826 1.1611585009997691 1.1675646677378724 1.3863578686545843 1.0 15.05703118184584 -6.447438589223086 6.008548635099117 1.1933063172336373 1.3533812469823097 0.29058596271459813 0.13547777585989731 0.35680263012666563 22.26256662557073 0.05006556460865094 0.043659955925353246 3.5691221436581804e-07 6.447438589223086 0.16007492974867232 YAHVVLR ddPTM_KYSE-520_SHP099_60min_R1 1 YAHVVLR 7 0 P62269 P62269 RPS18 40S ribosomal protein S18 0 88.59100000000001 0.027127 148410000.0 100910.0 97641.0 85681.0 84987.0 93163.0 110980.0 69721.0 72343.0 71786.0 56679.0 False True 95312.32114090228 92950.17979787094 91204.13435444701 93064.13892772673 100494.39807504014 110287.33265405917 76769.07909138757 72092.05901798322 58751.471977795976 56176.86815559471 1.6966471124184594 1.6545988206466782 1.6235176033992542 1.6566273981305664 1.7888928552709253 1.9632161114534388 1.3665603229919832 1.2833050574892808 1.0458303196089591 1.0 15.777688576417875 -7.190389303430022 1.95583427620364 1.063645105612262 1.7179978607281103 0.8495383742874717 0.11770475984681963 0.13615496821295214 0.9827849975569257 0.0846309995470878 0.03666447361112003 6.450757211510298e-08 7.190389303430022 0.6543527551158483 YALTGDEVKK ddPTM_KYSE-520_SHP099_60min_R1 2 YALTGDEVKK 10 1 P62701;C9JEH7;P22090;Q8TD47 P62701 RPS4X;RPS4Y1;RPS4Y2 40S ribosomal protein S4, X isoform;40S ribosomal protein S4, Y isoform 1;40S ribosomal protein S4, Y isoform 2 0 ; 124.1 0.0014697 425910000.0 907220.0 806050.0 577910.0 518410.0 783190.0 767570.0 549460.0 575810.0 721390.0 595520.0 False True 856894.6981017675 767326.1480942843 615163.0032886927 567679.5305343505 844822.5972584676 762779.3109143655 605004.7790128342 573812.6495050638 590403.7607620178 590244.1561075487 1.4517631207951038 1.3000148161644305 1.04221786344396 0.9617706921115426 1.4313103967513605 1.292311500285958 1.0250076561581338 0.9721615090425546 1.000270404463674 1.0 19.170952327118776 -1.0000000000000002 0.2281025999647951 0.992715871148045 3.126898242585033 0.36737147989244856 0.14925093307850962 67.18469588415638 0.8751691363055648 0.24906606668228476 53.412188260243184 0.09999999999999995 1.0000000000000002 2.134182371436988 YALYDATYETK ddPTM_KYSE-520_SHP099_60min_R1 5 YALYDATYETK 11 0 E9PP50;P23528;G3V1A4;E9PK25;E9PQB7;E9PLJ3;Q9Y281-3;Q9Y281 E9PP50;Q9Y281-3 CFL1;CFL2 Cofilin-1;Cofilin-2 0 ;;;; 258.17 2.0779e-19 5782460000.0 4848460.0 6203450.0 3699400.0 3461568.0 4990160.0 6608640.0 4636990.0 4654040.0 4560090.0 5048320.0 False True 4579506.25863461 5905426.950431718 3937869.2432492836 3790554.3819616325 5382857.20187351 6567393.026409455 5105742.201861316 4637896.221501106 3732092.6065141913 5003595.812333527 0.9152430432822801 1.180236608215883 0.7870078621344077 0.7575660633135416 1.075797766998911 1.3125346796040704 1.0204145964939864 0.9269126435170891 0.7458821108841034 1.0 22.254533823437537 -7.470984674603899 4.934911354258839 0.861517024048171 1.008690567319303 0.09576335622218035 0.16737580314951894 0.47896589855983823 25.563051991986445 0.10893105528850124 0.047624535158257035 3.3807676605808204e-08 7.470984674603899 0.14717354327113197 YAPTEVGLHEMHIK ddPTM_KYSE-520_SHP099_60min_R1 2 YAPTEVGLHEMHIK 14 0 O75369-2;O75369-9;O75369;O75369-8;O75369-6;O75369-3;E7EN95;O75369-7;O75369-5;O75369-4 O75369-2 FLNB Filamin-B 0 ; 228.8 1.8271e-14 363800000.0 435010.0 321279.0 213124.0 323700.0 426600.0 325471.0 275555.0 331310.0 277235.0 309020.0 False True 410879.1281290637 305844.27459038934 226862.31405045703 354464.3506760466 460170.9929780291 323439.6147616626 303410.7885576407 330160.762938335 226896.1125256214 306282.3232139221 1.341504543316678 0.9985697880996325 0.7406967260464641 1.1573124656902642 1.5024405853700669 1.0560178967160212 0.9906245498396726 1.0779621868929572 0.7408070767673601 1.0 18.224502580036702 -7.28631418037459 1.663103939751613 0.8961493010734687 1.1203189093474413 0.16580026569971362 0.20439936365077027 0.8293825088711733 4.149185809081114 0.17299004431841616 0.06619049297156276 5.1723251657985725e-08 7.28631418037459 0.2241696082739726 YAS(ph)ICQQNGIVPIVEPEILPDGDHDLKR ddPTM_KYSE-520_SHP099_60min_R1 1 YASICQQNGIVPIVEPEILPDGDHDLKR 28 1 P04075;P04075-2;H3BQN4;H3BPS8;P09972 P04075 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C 1 Y(0.153)AS(0.847)ICQQNGIVPIVEPEILPDGDHDLKR 70.578 0.014694 134870000.0 120260.0 150060.0 146380.0 139680.0 146170.0 129970.0 102780.0 145140.0 184590.0 137300.0 True False 113588.93806763351 142850.8923553481 155815.88901628097 152955.1452036765 157672.7474064662 129158.80902007654 113170.0054361354 144636.54321593072 151073.10913522652 136083.62881778379 0.834699508342251 1.0497287116485239 1.145000984834985 1.1239790306333153 1.158645964810288 0.9491134983842944 0.831621014366616 1.062850428611066 1.1101490344405327 1.0 17.05413399209409 -6.287414026262089 24.645169796450368 0.9847295850724788 1.0697150974757685 0.09436034856422992 0.1090549687416213 1520.4545746194296 1442626.6916704641 0.04114147805173131 0.0362971921643928 5.159242882889004e-07 6.287414026262089 0.08498551240328978 YAS(ph)SPKPNNSYMFK ddPTM_KYSE-520_SHP099_60min_R1 2 YASSPKPNNSYMFK 14 1 Q86VQ1;H7C0B2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 Y(0.008)AS(0.702)S(0.288)PKPNNS(0.001)Y(0.001)MFK;Y(0.001)AS(0.864)S(0.135)PKPNNSYMFK 76.07300000000001 0.023008 3404100000.0 4823800.0 4584000.0 4007800.0 4160040.0 4223400.0 4377000.0 4417600.0 4597900.0 5039800.0 4250050.0 True False 4556214.197993099 4363777.759275725 4266149.200706727 4555408.950838368 4555757.552141135 4349681.519434288 4864174.119621252 4581950.958057923 4124699.3630192014 4212397.863488864 1.081620099916078 1.0359367516299807 1.0127602707435959 1.0814289386865774 1.0815116947115455 1.032590382104059 1.154728085345804 1.0877298646863764 0.9791808600916373 1.0 22.00621027552977 -4.1913051282512575 19.251603291609026 1.057760950226659 1.0816246886486949 0.01949201757420793 0.049062312760534674 29181.752480013623 8003871.515460702 0.012300124449674116 23.860366603099497 6.437168416001924e-05 4.1913051282512575 0.02386373842203593 YASICQQNGIVPIVEPEILPDGDHDLK ddPTM_KYSE-520_SHP099_60min_R1 4 YASICQQNGIVPIVEPEILPDGDHDLK 27 0 P04075;P04075-2;H3BQN4;H3BPS8;P09972 P04075 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C 0 ;;; 187.21 4.8759999999999996e-15 736991000.0 826632.0 903221.0 508318.0 593719.0 750652.0 855148.0 599887.0 713260.0 651057.0 681957.0 False True 780777.0751099612 859828.9073976384 541084.9916175565 650145.8752518735 809724.0417743628 849810.7041309547 660529.4322929266 710785.8675361358 532841.4606113723 675915.3915345181 1.1551402511154207 1.2720954695906317 0.8005217789006719 0.9618746419960337 1.1979665678807245 1.2572737871845843 0.9772368562185556 1.051590001408981 0.7883256799370587 1.0 19.366483141280053 -7.421665254073784 2.245236093291822 0.9045788122024272 1.0937070901991661 0.1992005563078616 0.14741513712099352 0.5613023342522512 5.240130178597085 0.12118733312307373 0.04373446226996383 3.787343935091672e-08 7.421665254073784 0.18912827799673892 YASICQQNGIVPIVEPEILPDGDHDLKR ddPTM_KYSE-520_SHP099_60min_R1 7 YASICQQNGIVPIVEPEILPDGDHDLKR 28 1 P04075;P04075-2;H3BQN4;H3BPS8;P09972 P04075 ALDOA;ALDOC Fructose-bisphosphate aldolase A;Fructose-bisphosphate aldolase;Fructose-bisphosphate aldolase C 0 ;;;;;; 168.57 9e-10 8149400000.0 4724420.0 4273860.0 3004280.0 3017510.0 4425900.0 3665370.0 3184520.0 3594420.0 3546500.0 3214610.0 False True 4462347.004702217 4068537.3504053573 3197940.695817961 3304293.2431525397 4774193.150073745 3642493.0662300354 3506442.359520166 3581951.795963939 2902544.9999896027 3186131.056328735 1.4005535007226038 1.276952290560636 1.0037065768106959 1.0370864175813153 1.4984296206493395 1.1432339102921742 1.100532996768976 1.1242324099785443 0.910993599658798 1.0 21.603374180326398 -7.279984292285401 1.3448300607316284 0.9679901486527147 1.2209319579782947 0.32526772962839645 0.14630226494440526 0.616142849123175 1.9712060550798376 0.12981502293626093 0.04921820079135299 5.2482644201267244e-08 7.279984292285401 0.25294180932557997 YASS(ph)PKPNNSYMFK ddPTM_KYSE-520_SHP099_60min_R1 4 YASSPKPNNSYMFK 14 1 Q86VQ1;H7C0B2 Q86VQ1 GLCCI1 Glucocorticoid-induced transcript 1 protein 1 Y(0.001)AS(0.435)S(0.564)PKPNNSYMFK;YAS(0.002)S(0.998)PKPNNSYMFK;YAS(0.024)S(0.976)PKPNNSYMFK;YAS(0.187)S(0.812)PKPNNS(0.001)YMFK 238.67 3.4293999999999996e-18 10235540000.0 9976360.0 9480990.0 8617200.0 8864600.0 9039220.0 9134630.0 9263120.0 9601080.0 10698300.0 8684640.0 True False 9422951.4234194 9025509.009143878 9172678.50000749 9707088.918760832 9750555.187873546 9077617.385851044 10199526.568939239 9567776.09438891 8755758.402196173 8607700.846147679 1.0947117693613366 1.0485388805284963 1.0656363021854627 1.1277214545746181 1.1327711501773838 1.0545925733366621 1.1849304188474408 1.1115367814706185 1.017200592666363 1.0 23.037196508361966 -7.807945686242826 5.5384953116101485 1.0040873618073753 1.1025623069352952 0.48333446078099485 0.038926072867466674 0.17714995700109515 11.954063717276968 0.03808715109923107 0.010260139448575553 1.5561602360215378e-08 7.807945686242826 0.09847494512791988 YAVLYQPLFDKR ddPTM_KYSE-520_SHP099_60min_R1 3 YAVLYQPLFDKR 12 1 P55209;P55209-2;H0YIV4;F5H4R6;F8VY35;F8W118;F8VV59;H0YH88;F8W0J6;F8W543;F8W020;H0YHC3;F8VRJ2;B7Z9C2;F8VVB5 P55209 NAP1L1 Nucleosome assembly protein 1-like 1 0 ;; 163.45 3.4885e-05 431115000.0 243612.0 269670.0 211374.0 200716.0 289345.0 267526.0 218485.0 234479.0 275688.0 214631.0 False True 230098.3567315176 256714.64841707784 224999.50625035758 219791.9882925342 312114.8053521509 265856.27100026933 240571.5960081149 233665.64707681022 225630.0087289249 212729.53632039105 1.081647432282123 1.20676542081322 1.0576787320754875 1.0331992072859426 1.4671907378300122 1.2497384030389853 1.1308800844927853 1.0984165674337172 1.0606426010777577 1.0 17.698660831875518 -7.549171247826314 1.6511663013908944 1.0164019109035631 1.181809609887232 0.20953222173318065 0.11688407330444892 0.6627430667002495 3.233754670667719 0.11282300728039951 0.03639823472599152 2.8237663084688342e-08 7.549171247826314 0.1654076989836688 YCDEDS(ph)DSDKEWIAALR ddPTM_KYSE-520_SHP099_60min_R1 2 YCDEDSDSDKEWIAALR 17 1 Q8NG27;Q8NG27-3;Q8NG27-2 Q8NG27 PJA1 E3 ubiquitin-protein ligase Praja-1 1 YCDEDS(0.999)DS(0.001)DKEWIAALR;YCDEDS(1)DSDKEWIAALR 199.61 8.2046e-13 281543000.0 472430.0 403010.0 384370.0 393710.0 432710.0 417760.0 406420.0 453990.0 530920.0 438450.0 True False 446223.3661341435 383648.7946696575 409147.10521374445 431128.08002677193 466761.8152168843 415152.6048797963 447504.89987696195 452415.21465206286 434518.3114040544 434565.6741089386 1.0268260765167625 0.8828327167264548 0.9415081070374138 0.9920895867138716 1.0740880907677826 0.9553276515248285 1.0297750755269726 1.0410744373211807 0.999891011398953 1.0 18.729214696474198 -5.392320614665398 4.210472111295171 1.017461298267581 0.9440673792762686 0.3091443381619492 0.04372167502405891 0.24689053457857896 7.243987747748528 0.012143220503681431 0.018415272394359323 4.052092822677823e-06 5.392320614665398 -0.07339391899131242 YCDPDSYHRR ddPTM_KYSE-520_SHP099_60min_R1 2 YCDPDSYHRR 10 1 P26368-2;P26368;K7ENG2 P26368-2 U2AF2 Splicing factor U2AF 65 kDa subunit 0 ; 63.283 0.065651 487140000.0 327740.0 558060.0 505630.0 657650.0 406970.0 395820.0 365350.0 256800.0 345060.0 259590.0 False True 309559.6088665073 531249.9599348626 538223.718836604 720152.8582703173 438996.22365745006 393349.54055802606 402283.1434723892 255909.22073757058 282405.8022547333 257290.23455796408 1.2031533548031634 2.064788665017051 2.091893303923081 2.798990251252915 1.7062296375595631 1.5288164404444569 1.5635383292472382 0.9946324670162233 1.097615705236224 1.0 17.973037175106818 -6.7575656202708805 1.2584173733335664 1.024877871847173 2.0284436278302125 0.5210019948155563 0.38218203750239643 0.38094291727035073 1.2121818431430789 0.25881835044214857 0.1493584688331405 1.7475691913040658e-07 6.7575656202708805 1.0035657559830395 YDAIFDS(ph)LSPVNGFLSGDK ddPTM_KYSE-520_SHP099_60min_R1 1 YDAIFDSLSPVNGFLSGDK 19 0 P42566;B1AUU8 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 Y(0.001)DAIFDS(0.811)LS(0.187)PVNGFLS(0.001)GDK 66.059 0.028345 3550900.0 28584.0 22969.0 22882.0 22565.0 25176.0 27602.0 20454.0 25056.0 30571.0 25496.0 True False 26998.38853920867 21865.534762828116 24357.01033249446 24709.570815585354 27157.20796815484 27429.725679557978 22521.68993180305 24969.086584114368 25020.077032195702 25270.12527558784 1.0683915589959665 0.8652721157639561 0.9638658323559839 0.9778175037167698 1.074676428074142 1.0854606132901294 0.8912377634138635 0.9880871705941129 0.9901049859996659 1.0 14.625145195950116 -5.528516117489507 24.97791772075094 1.0048172860743796 0.9582953190311109 0.06292587759190804 0.0675344635836246 387.8709748345803 1718556.5343532627 0.02044680832976436 0.02647362105811331 2.9613100635385254e-06 5.528516117489507 -0.04652196704326872 YDAIFDSLS(ph)PVNGFLSGDK ddPTM_KYSE-520_SHP099_60min_R1 2 YDAIFDSLSPVNGFLSGDK 19 0 P42566;B1AUU8 P42566 EPS15 Epidermal growth factor receptor substrate 15 1 YDAIFDSLS(1)PVNGFLSGDK;YDAIFDSLS(1)PVNGFLSGDK 269.71 2.5579999999999997e-35 298760000.0 705680.0 662700.0 579190.0 527260.0 643440.0 685080.0 560030.0 692040.0 835940.0 647220.0 True False 666534.523661796 630862.8972670208 616525.5141367662 577370.6318735003 694075.0673271978 680804.1616024767 616643.2977660919 689639.4747633506 684154.3683325266 641486.1343295403 1.0390474368685076 0.983439646636131 0.9610893847006341 0.9000516160445909 1.0819798436526171 1.0612920921728577 0.9612729952621449 1.0750652864603822 1.0665146629359055 1.0 19.29105855635317 -5.777701193635076 24.99984012713071 1.0418002447523476 0.9711009236061714 0.35044878482050523 0.04675555999987854 282.2373920742385 433891.3940920901 0.014979681929177303 0.017036084420659608 1.6683947184972777e-06 5.777701193635076 -0.07069932114617616 YDDAERR ddPTM_KYSE-520_SHP099_60min_R1 5 YDDAERR 7 1 P29692-2;P29692;E9PRY8;P29692-4;P29692-3;A0A087X1X7;E9PK01;E9PQZ1;E9PI39;E9PQ49;E9PL71;E9PL12;E9PPR1;H0YCK7;E9PK06;E9PIZ1;E9PMW7;E9PN91;E9PK72;E9PKK3;E9PJD0;E9PNW6 P29692-2 EEF1D Elongation factor 1-delta 0 ;;;; 120.92 0.006090600000000001 4734550000.0 5011730.0 5360860.0 3720840.0 2703090.0 4835890.0 4814710.0 3177440.0 3693840.0 4636990.0 3996620.0 False True 4733719.346263932 5103316.238785091 3960691.2999544973 2959990.8608863563 5216447.030549742 4784659.608964007 3498646.644026024 3681026.931188733 3795029.505005436 3961213.056123307 1.195017606777417 1.2883215738412006 0.9998682837400015 0.7472435385192813 1.3168812070045246 1.2078773701828038 0.8832260710182603 0.9292675953136482 0.9580473080434334 1.0 21.917510868836388 -1.000000000032247 0.4122328244249848 0.9861216447516962 5.718889315781784 0.17601994250187158 0.16274312693108184 140.60944137814928 1.8310650555467498 0.1215683546209342 545.4956869402065 0.09999999999257483 1.000000000032247 4.732767671030087 YDDIKK ddPTM_KYSE-520_SHP099_60min_R1 2 YDDIKK 6 1 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ; 95.62 0.033291 17910400000.0 33282000.0 28950000.0 19505200.0 18603800.0 28762000.0 28116000.0 22438700.0 26356100.0 23989700.0 23404000.0 False True 31435781.1139779 27559198.545164112 20762536.401423454 20371899.55856355 31025405.766605895 27940517.61489935 24707022.776608437 26264676.84065999 19633775.211123798 23196658.76803649 1.3551857372361917 1.1880675928698372 0.895065819997874 0.8782255997417492 1.3374945968234409 1.2045061271237734 1.0651112741569977 1.1322612063790427 0.8464053123968821 1.0 24.46741367965362 -7.748927397674214 24.823986572698264 0.9232026721190189 1.1245408602032405 0.22574607985649775 0.15417315386004812 298.3513300296762 591942.4369633087 0.11269257353639682 0.0419319136400598 1.7826767580200274e-08 7.748927397674214 0.20133818808422166 YDDMAACMK ddPTM_KYSE-520_SHP099_60min_R1 4 YDDMAACMK 9 0 P63104;E7EX29;E7ESK7;E9PD24;E7EVZ2;E5RIR4;E5RGE1 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ;;; 140.5 0.0031236999999999997 4634610000.0 5723900.0 7412100.0 4299020.0 4051440.0 6074100.0 7152500.0 5259790.0 5910300.0 5763900.0 5993700.0 False True 5406383.856688243 7056011.59021108 4576141.707875201 4436487.639490143 6552097.113098563 7107858.5944148395 5791500.903803569 5889798.548774391 4717321.056094761 5940600.481028038 0.9100736321107816 1.1877606670815906 0.7703163548011035 0.7468079453682427 1.1029351551284095 1.1964882366882892 0.9749015982979103 0.991448350648072 0.794081519395227 1.0 22.50217733658188 -3.9666976434349297 17.433927815869446 0.975733817240174 0.6601197229797224 0.015004922624473171 0.1543714714371148 41553255.15300963 560746844.4579079 0.04039810053596194 406201225.9762079 0.00010796981483348158 3.9666976434349297 -0.3156140942604516 YDDYRDYDS(ph)PERER ddPTM_KYSE-520_SHP099_60min_R1 2 YDDYRDYDSPERER 14 2 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-3;P52756-4;P52756-2;P52756-5 P52756 RBM5 RNA-binding protein 5 1 YDDY(0.001)RDY(0.018)DS(0.982)PERER;YDDYRDY(0.002)DS(0.997)PERER 84.365 0.0069766 651940000.0 614790.0 585480.0 557460.0 507660.0 550220.0 545630.0 465800.0 492500.0 749120.0 510940.0 True False 580686.373146519 557352.6619766036 593394.7635675366 555907.8537664558 593519.1836764435 542224.5207788288 512887.6097699159 490791.63245036366 613098.6917784325 506413.46910530434 1.1466645509497106 1.100588147786225 1.171759441185292 1.0977351268886957 1.1720051299682677 1.0707150458237078 1.012784297929614 0.9691520119270519 1.2106682171420362 1.0 18.94995625114819 -6.44081876739808 5.443161086586961 1.0449794106416739 1.1349245640223435 0.3058941114409932 0.06459867020619965 0.27665448823548444 13.779272807475223 0.022367719323379782 0.019451862896088076 3.6239419522856086e-07 6.44081876739808 0.08994515338066966 YDDYSSSR ddPTM_KYSE-520_SHP099_60min_R1 1 YDDYSSSR 8 0 P38159;P38159-2;H3BUY5;Q96E39 P38159;Q96E39 RBMX;RBMXL1 RNA-binding motif protein, X chromosome;RNA-binding motif protein, X chromosome, N-terminally processed;RNA binding motif protein, X-linked-like-1 0 175.38 0.00061852 680500000.0 884660.0 1032500.0 652190.0 738330.0 833000.0 957040.0 700640.0 780700.0 846770.0 814080.0 False True 835586.1462740112 982897.150185904 694231.2109408954 808500.6612129905 898552.3608783359 951066.7583640384 771467.5287874497 777991.9339167491 693017.9133346097 806867.8845446556 1.0355922726377471 1.2181636783580598 0.8604025816849494 1.002023598534048 1.1136300974296693 1.178714355325667 0.9561262054974669 0.9642122940062211 0.8588988688348955 1.0 19.62197294234398 -6.966695675014382 24.066464546945987 0.9389671531909493 1.0647767923009506 0.2753610337374327 0.0980957306259517 173.05558922907503 125053.26486278842 0.04250320361545064 0.028655406295975346 1.079703042030052e-07 6.966695675014382 0.12580963911000131 YDEELEGERPHSFR ddPTM_KYSE-520_SHP099_60min_R1 2 YDEELEGERPHSFR 14 1 O43290 O43290 SART1 U4/U6.U5 tri-snRNP-associated protein 1 0 ; 113.72 0.00014712 939720000.0 391990.0 345470.0 240027.0 247035.0 374640.0 348240.0 302480.0 316970.0 333980.0 299440.0 False True 370245.5332873077 328873.1026389582 255499.5244767786 270513.1321262188 404122.03658998775 346066.5049869311 333057.6303203179 315870.50505135435 273337.65095066285 296787.19456079486 1.2475118201619895 1.1081108237356607 0.8608845973118333 0.9114717113268377 1.3616559069808725 1.1660425763957336 1.12221024499793 1.0642996424384152 0.9209886947958311 1.0 18.179069319959588 -7.610358130429247 4.811774083722488 0.9627271641840859 1.1047853744880702 0.15514766961219462 0.13804963354974634 0.4563548000518809 18.114080477804592 0.10984991487578831 0.038723462924484385 2.4526855337928862e-08 7.610358130429247 0.14205821030398436 YDEGS(ph)GGS(ph)GDEGRDEAHKR ddPTM_KYSE-520_SHP099_60min_R1 5 YDEGSGGSGDEGRDEAHKR 19 2 O94762;O94762-4 O94762 RECQL5 ATP-dependent DNA helicase Q5 2 Y(0.006)DEGS(0.999)GGS(0.995)GDEGRDEAHKR;Y(0.057)DEGS(0.987)GGS(0.956)GDEGRDEAHKR;Y(0.002)DEGS(0.998)GGS(1)GDEGRDEAHKR;Y(0.021)DEGS(0.98)GGS(0.999)GDEGRDEAHKR;Y(0.01)DEGS(0.995)GGS(0.995)GDEGRDEAHKR 80.102 0.003156 7560690000.0 2895180.0 2763000.0 2452430.0 2770970.0 2754090.0 2581300.0 2619880.0 2814560.0 3277560.0 2368210.0 True False 2734578.594001757 2630261.332652449 2610517.5618267404 3034322.155677494 2970821.214371445 2565189.1492153825 2884723.0379648027 2804796.9482832397 2682437.7245639125 2347229.501839497 1.1650239534986668 1.1205812344260087 1.112169713179264 1.2927249565070353 1.265671384942651 1.092858260006136 1.2289906188142565 1.194939372602957 1.1428101608563273 1.0 21.162527478496028 -8.158074088465085 3.326031216319531 1.0000370995855985 1.184111856754846 0.4418189374724881 0.062063766062056526 0.7753278272966685 14.423037656521531 0.06301085690539704 0.01669967857502314 6.949057600315773e-09 8.158074088465085 0.1840747571692476 YDEIFYNLAPADGKLS(ph)GSK ddPTM_KYSE-520_SHP099_60min_R1 4 YDEIFYNLAPADGKLSGSK 19 1 Q9NZN4;Q9NZN4-2 Q9NZN4 EHD2 EH domain-containing protein 2 1 YDEIFYNLAPADGKLS(0.942)GS(0.058)K;YDEIFYNLAPADGKLS(1)GSK;YDEIFYNLAPADGKLS(0.997)GS(0.003)K;YDEIFYNLAPADGKLS(0.932)GS(0.068)K 205.02 8.4861e-14 9664492000.0 2776040.0 2185400.0 1691942.0 1868111.0 1785615.0 1709729.0 1501565.0 1798776.0 2314228.0 1642028.0 True False 2622047.5273014572 2080410.103647723 1801007.2885229154 2045655.7077719488 1926132.7417404186 1699057.9471192302 1653357.8440621782 1792536.4658934723 1894022.5321404026 1627480.9093984524 1.6111080088003094 1.2783007724598636 1.1066226817914575 1.2569460544566766 1.1835055825339011 1.0439802625686307 1.0158999927521672 1.101417814207128 1.1637755756167174 1.0 20.63420918977947 -1.0000000034774956 0.7080060811612906 1.090474773496318 69.54547854063685 0.8229152517052973 0.07178002555948414 126.82038757974375 0.6506098455068737 0.02967531883611408 13760.909620860566 0.09999999919927705 1.0000000034774956 68.45500376714054 YDEIRR ddPTM_KYSE-520_SHP099_60min_R1 1 YDEIRR 6 1 P62424;Q5T8U2 P62424 RPL7A 60S ribosomal protein L7a 0 82.26299999999999 0.052523 835870000.0 951210.0 925940.0 749650.0 574640.0 894650.0 838030.0 669120.0 761870.0 858230.0 745980.0 False True 898444.4851098763 881456.4525357254 797973.6384824093 629253.6128281846 965053.8651378192 832799.5439185557 736761.1795818929 759227.2507917951 702397.0662177008 739371.197563658 1.2151467193615186 1.1921703948439704 1.0792598374292308 0.8510658988362979 1.3052359468665 1.126361895976958 0.9964699490724477 1.0268553242181544 0.9499924645864045 1.0 19.495939318419875 -1.0000000000000002 0.24821271073706305 0.9946596013138844 2.3382123862631423 0.23854307066956304 0.11341057624440817 83.73100879363318 1.1348719226662756 0.15645133626757662 46.87010105407598 0.09999999999999995 1.0000000000000002 1.343552784949258 YDEMVESMK ddPTM_KYSE-520_SHP099_60min_R1 5 YDEMVESMK 9 0 P62258;B4DJF2;I3L3T1 P62258 YWHAE 14-3-3 protein epsilon 0 ;;;; 161.92 0.0010122999999999998 2503840000.0 3801260.0 4254830.0 2715300.0 2353320.0 3501670.0 4352930.0 3397460.0 3688410.0 3226360.0 3912080.0 False True 3590396.5301760593 4050421.58016997 2890332.582633611 2576978.8252485446 3777231.5072230985 4325761.749232605 3740908.4128142926 3675615.7665913664 2640534.353916944 3877422.0147521836 0.9259751753912532 1.0446171618048246 0.7454263610298142 0.6646113875260612 0.9741605357508426 1.1156283047794775 0.9647926892098652 0.9479534991566516 0.6810025691995014 1.0 21.886666334450993 -3.118211092587096 15.302408869278292 0.9069439460740203 0.9589041336510815 0.0 0.14728663490237345 0.0 0.0 0.035603547018641137 0.0 0.0007617086849421033 3.118211092587096 0.05196018757706122 YDEMVESMKK ddPTM_KYSE-520_SHP099_60min_R1 2 YDEMVESMKK 10 1 P62258;B4DJF2;I3L3T1 P62258 YWHAE 14-3-3 protein epsilon 0 ; 121.08 0.0012378 2045480000.0 2230640.0 2140000.0 1329320.0 1167010.0 1752580.0 1967790.0 1314130.0 1454200.0 1840070.0 1574270.0 False True 2106901.9525294034 2037191.1877945135 1415010.0941872036 1277922.2795256502 1890498.0751838565 1955508.2926953626 1446975.0850728627 1449155.7196128303 1505959.672389924 1560323.1925635256 1.3502984269995235 1.3056212953212083 0.9068698721720718 0.8190112699831718 1.2116067262179648 1.253271310722857 0.9273560067357339 0.9287535598518835 0.9651588078465428 1.0 20.573413457396196 -4.720400137707321 8.995448471862534 1.0063657880161911 1.3300399113147416 0.510933025172314 0.12769660697350677 0.2756261378583908 55.4240784049248 0.0359393437807274 0.09453763985119588 1.903705928109528e-05 4.720400137707321 0.3236741232985505 YDERPGPS(ph)PLPHR ddPTM_KYSE-520_SHP099_60min_R1 12 YDERPGPSPLPHR 13 1 P08621;P08621-4 P08621 SNRNP70 U1 small nuclear ribonucleoprotein 70 kDa 1 Y(0.004)DERPGPS(0.996)PLPHR;YDERPGPS(1)PLPHR;Y(0.01)DERPGPS(0.99)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR;YDERPGPS(1)PLPHR 139.67 8.1489e-06 212122870000.0 30288570.0 27653900.0 26507840.0 26410940.0 26266280.0 26091660.0 24433190.0 25976620.0 33734790.0 24293620.0 True False 28608402.64333262 26325365.134649873 28216577.780443598 28921027.79686136 28333286.8013102 25928812.27173014 26903135.29015502 25886513.16820869 27609402.520851333 24078397.42695033 1.188135661026675 1.0933188230037505 1.171862781401785 1.201119297270623 1.1767098241180072 1.0768495847945714 1.1173141971667528 1.0750928605919006 1.146646183767564 1.0 24.521236038820373 -6.261029548352346 24.99966668495118 1.090007219355271 1.1644300050884357 0.4641144878366582 0.04429605854944153 38.85413719078489 2370137.3111675307 0.014742484235116924 0.013891372460763845 5.48239662743408e-07 6.261029548352346 0.07442278573316474 YDGES(ph)DKEQFDDDQK ddPTM_KYSE-520_SHP099_60min_R1 2 YDGESDKEQFDDDQK 15 1 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 YDGES(1)DKEQFDDDQK;Y(0.001)DGES(0.999)DKEQFDDDQK 203.77 2.308e-10 486340000.0 1210000.0 1954670.0 1339920.0 1347680.0 1649290.0 1289960.0 1527610.0 1719000.0 2199460.0 1419180.0 True False 1142878.8879248004 1860764.7191805148 1426293.3871478003 1475763.1020052324 1779079.7398235667 1281908.881153635 1682035.7268368837 1713037.1902176146 1800093.5078745582 1406607.1693053318 0.8125075094628044 1.3228744739723413 1.0139955335590893 1.049165064851798 1.2648021271654577 0.9113481781745216 1.1958105742256206 1.2178504614501693 1.279741456716415 1.0 20.423788045002187 YDGES(ph)DKEQFDDDQKVCCGFFFK ddPTM_KYSE-520_SHP099_60min_R1 1 YDGESDKEQFDDDQKVCCGFFFK 23 2 Q08AD1-2;Q08AD1-3;Q08AD1 Q08AD1-2 CAMSAP2 Calmodulin-regulated spectrin-associated protein 2 1 YDGES(1)DKEQFDDDQKVCCGFFFK 310.59 8.733399999999999e-61 937700000.0 465200.0 515160.0 475170.0 430530.0 511250.0 339840.0 396210.0 476990.0 591050.0 423160.0 True False 439394.4286467913 490410.9403290748 505800.21849888173 471447.4417564352 551482.4663854135 337718.93250275275 436262.7734369655 475335.4330203023 483730.2191580013 419411.13161349803 1.0476460816774615 1.169284511935667 1.2059770959178886 1.1240699309595112 1.314897065950133 0.8052216716412108 1.0401792908038425 1.1333400503502622 1.1533556996855667 1.0 18.67800562702647 -6.2351048244205 24.999869675222705 1.0356129948711519 1.171386395320594 0.31083790470006156 0.1082266307039695 1065.3715167822822 1011377.3661859185 0.0366854039722081 0.03667396229743465 5.81962734132092e-07 6.2351048244205 0.1357734004494422 YDGKWEVEEMK ddPTM_KYSE-520_SHP099_60min_R1 1 YDGKWEVEEMK 11 1 P27824;P27824-2;H0Y9Q7;D6RAU8;D6RB85;D6RDP7 P27824 CANX Calnexin 0 100.19 0.0017495999999999998 844120000.0 788490.0 980200.0 435200.0 817300.0 1096800.0 1293600.0 902720.0 1084800.0 1258600.0 899230.0 False True 744750.8878841536 933109.7206898046 463253.6883446195 894975.9462697952 1183111.9200616556 1285526.1625634432 993975.7472981935 1081037.0819942239 1030069.9667240684 891263.5217903532 0.8356124419723947 1.046951544494261 0.5197718486380373 1.0041653499651646 1.327454665355363 1.4423637130139721 1.1152433853699228 1.2129264303588427 1.155741193866976 1.0 19.765492533984254 -5.538720588871831 6.47893081215526 1.222804528826625 0.8145571244527079 0.5572387035447004 0.1632693598227241 0.11088500166498517 19.120577491940292 0.047969057967866546 0.06396471747824327 2.8925402513934267e-06 5.538720588871831 -0.40824740437391704 YDGNVYENLFEWAK ddPTM_KYSE-520_SHP099_60min_R1 2 YDGNVYENLFEWAK 14 0 Q15067-2;Q15067;K7ENF1;K7ESC7;Q15067-3 Q15067-2 ACOX1 Peroxisomal acyl-coenzyme A oxidase 1 0 ; 115.8 0.001013 30289000.0 112625.0 119815.0 131829.0 118483.0 107198.0 108933.0 90955.0 113838.0 138953.0 105175.0 False True 106377.46673762861 114058.90755401847 140326.90827385764 129743.58869678709 115633.8727268138 108253.1087403554 100149.61903525692 113443.12254798891 113722.6379200775 104243.23132491174 1.0204736114334825 1.094161281306722 1.3461488721169632 1.2446236273355173 1.1092698418605138 1.0384665494773988 0.9607301861461336 1.088254087158929 1.0909354638635458 1.0 16.669594184715777 -6.033583716466173 3.966324350964016 1.037987077005131 1.1827339672225872 0.3590782532522391 0.08818970950052205 0.2701728089698092 9.231281532060976 0.0322347144391051 0.03392276767074779 9.255849482006032e-07 6.033583716466173 0.14474689021745624 YDHQAEEDLR ddPTM_KYSE-520_SHP099_60min_R1 5 YDHQAEEDLR 10 0 Q15417-3;Q15417 Q15417-3 CNN3 Calponin-3 0 ;;;; 171.92 6.8069e-05 1076590000.0 2112820.0 2063460.0 1206670.0 1046840.0 1812710.0 1853510.0 1404380.0 1552590.0 1426760.0 1597070.0 False True 1995617.6627977502 1964328.284283397 1284453.878940265 1146331.3588560775 1955359.9640909582 1841941.5565653748 1546348.435827982 1547204.427667231 1167696.3496926995 1582921.2023016575 1.260718259314493 1.2409514013882383 0.8114452425506689 0.7241872540397125 1.2352857244237765 1.1636343956269504 0.9768953966751492 0.9774361638580037 0.7376844456911705 1.0 20.59415800933616 -4.737266914248102 22.71606919429589 0.9627552537462597 1.2508362472795793 0.3631722031866482 0.15719083653822208 98.06219823345938 92149.1093600255 0.0431234134725154 0.11388785833873438 1.831188641161009e-05 4.737266914248102 0.2880809935333196 YDIDLPNKK ddPTM_KYSE-520_SHP099_60min_R1 2 YDIDLPNKK 9 1 E5RGN3;E5RIM7;O00244 E5RGN3 ATOX1 Copper transport protein ATOX1 0 ; 134.59 0.0012190999999999999 4840900000.0 14143000.0 13912200.0 8722800.0 8810000.0 14505400.0 14384700.0 11017500.0 13664800.0 12583200.0 13415300.0 False True 13358459.596628493 13243837.029362062 9285085.644973474 9647299.751176903 15646892.455563765 14294919.751566477 12131256.420438068 13617399.998188302 10298408.076658431 13296450.878945474 1.0046635540752613 0.9960430155338126 0.6983130859134843 0.72555449864092 1.176772102421718 1.0750928861928146 0.9123680093947133 1.024137953967178 0.7745230791598416 1.0 23.664537873648868 -4.56431510302834 24.999769360707006 0.925618949658334 1.0025134891447125 0.04216094093205214 0.1467524484924309 516.0710821668505 311358.9874655053 0.04009604387276687 0.10608450748605426 2.7269984869139407e-05 4.56431510302834 0.07689453948637848 YDILPLS(ph)PVSR ddPTM_KYSE-520_SHP099_60min_R1 3 YDILPLSPVSR 11 0 I3L4W0;I3L0X6;I3L1D9;I3L3K5;I3L4B2;O95476 I3L4W0 CTDNEP1 CTD nuclear envelope phosphatase 1 1 YDILPLS(0.999)PVS(0.001)R;YDILPLS(1)PVSR;YDILPLS(0.998)PVS(0.002)R 129.37 0.0001616 238545000.0 419610.0 533440.0 355249.0 397900.0 401810.0 517340.0 483600.0 403320.0 555680.0 394210.0 True False 396333.3968282034 507812.74169023597 378148.9189584973 435716.2963670024 433430.1610138346 514111.08916247054 532487.007481175 401920.9770555961 454782.519552861 390717.60609073914 1.014373016853917 1.299692498556881 0.9678317871109117 1.1151693437275332 1.1093182243576094 1.315812446504074 1.362843647638217 1.0286738319190436 1.1639673064726026 1.0 18.57576674057399 -4.015023034050467 15.216920724148952 1.155991798765004 0.9307646164707066 0.09018044760223065 0.12993699252146812 1023447.1915446089 38846291.161987565 0.032764518289599594 3111730.817253995 9.659996430760804e-05 4.015023034050467 -0.22522718229429728 YDLANQDHMMDAPPLS(ph)PFPHIK ddPTM_KYSE-520_SHP099_60min_R1 16 YDLANQDHMMDAPPLSPFPHIK 22 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK;YDLANQDHMMDAPPLS(1)PFPHIK 291.51 2.2169999999999999e-44 9635602000.0 5101575.0 5325214.0 4324700.0 3947274.0 4164455.0 4644406.0 4189225.0 4314064.0 5059059.0 4387263.0 True False 4818580.465012367 5069382.726130832 4603477.081764653 4322421.734168798 4492173.915992305 4615418.539399069 4612712.745896038 4299099.518894108 4140461.4140990796 4348395.263058962 1.1081284413005832 1.1658054108367042 1.0586611389430705 0.9940268703006789 1.033064761650071 1.0614073146957352 1.060785063649236 0.9886634629138621 0.9521814746864553 1.0 22.052051654615116 -2.878917085093997 0.31188516932193 0.9882355110601468 1.4822988195491642 0.5747633422569194 0.038997939045150344 13.556767989140116 0.5423508052569933 0.04324032453763268 2.9974988118768016 0.0013215479182164134 2.878917085093997 0.49406330848901736 YDLDFKS(ph)PDDPSR ddPTM_KYSE-520_SHP099_60min_R1 4 YDLDFKSPDDPSR 13 1 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 YDLDFKS(1)PDDPSR;YDLDFKS(1)PDDPSR;YDLDFKS(1)PDDPSR;YDLDFKS(1)PDDPSR 170.09 4.3028999999999997e-07 2289020000.0 4876900.0 4240130.0 3878980.0 4326680.0 4409100.0 4706100.0 4796600.0 4875800.0 4967600.0 4615930.0 True False 4606368.635140877 4036427.7902351134 4129025.2573874355 4737886.366336228 4756071.08565266 4676727.484260838 5281487.138304804 4858886.987820281 4065609.0630053123 4575036.451339203 1.0068485101998483 0.8822722689025946 0.9025119911730515 1.035595326229446 1.0395700965968182 1.0222273710828835 1.1544142204066614 1.0620433387799542 0.8886506383605378 1.0 22.12535180735622 -5.269656612457757 23.6870593499594 1.0369065933313588 0.9257170587550996 0.2964647939654256 0.06856701510754129 328.44801740728917 946787.8405756486 0.01964062443868175 0.029743475166025175 5.374565840664811e-06 5.269656612457757 -0.11118953457625924 YDLIQNSESPAS(ph)PPVAVPHSWSR ddPTM_KYSE-520_SHP099_60min_R1 2 YDLIQNSESPASPPVAVPHSWSR 23 0 A0A1B0GU24;Q9HCJ0-2;Q9HCJ0 A0A1B0GU24 TNRC6C Trinucleotide repeat-containing gene 6C protein 1 YDLIQNSESPAS(1)PPVAVPHSWSR;YDLIQNSESPAS(1)PPVAVPHSWSR 174.89 6.707300000000001e-11 1348820000.0 130563.0 191272.0 178866.0 185178.0 142104.0 181848.0 215730.0 186578.0 257711.0 197049.0 True False 123320.41011911222 182083.00601487464 190395.98855571853 202777.26144420443 153286.77633884156 180713.01917890925 237538.093721906 185930.80446563248 210917.17876563358 195303.29916180228 0.631430245409963 0.9323089102761389 0.9748733860249938 1.0382684896490675 0.7848652685167831 0.925294247227204 1.2162523354258015 0.9520105664553828 1.0799468297301815 1.0 17.575356794599404 -4.195787825966009 2.2409670326925504 0.9944023795932714 0.4975645811858323 0.5207940626501426 0.10458333578258565 0.674179955357123 3.3891790017704406 0.028683781109654565 0.7056088212843568 6.371067025825113e-05 4.195787825966009 -0.4968377984074391 YDNGSGYR ddPTM_KYSE-520_SHP099_60min_R1 1 YDNGSGYR 8 0 Q08211;Q08211-2 Q08211 DHX9 ATP-dependent RNA helicase A 0 160.69 0.0016673999999999999 338760000.0 338990.0 319560.0 247520.0 214020.0 381800.0 350220.0 255090.0 319170.0 270680.0 292710.0 False True 320185.5489401888 304207.8579306611 263475.5352460025 234360.39645254094 411845.48785516043 348034.1470724874 280876.986638488 318062.87376483827 221531.33528751897 290116.81712493405 1.1036435326749987 1.048570230934455 0.9081705013072064 0.8078138963989029 1.419585020739442 1.199634514543196 0.9681513447651432 1.0963269103695898 0.7635935671806303 1.0 18.146274400719143 -7.743281345993613 24.99573660984601 0.8817967280931276 1.0669204703003854 0.16947860728100528 0.1657022983105077 396.3038834914372 545542.7507341799 0.11830019772394981 0.044522269192826903 1.806003776013687e-08 7.743281345993613 0.1851237422072578 YDNSLK ddPTM_KYSE-520_SHP099_60min_R1 5 YDNSLK 6 0 P04406;P04406-2;E7EUT5 P04406 GAPDH Glyceraldehyde-3-phosphate dehydrogenase 0 ;;;; 146.94 0.051782 26656400000.0 12448300.0 13485600.0 9345500.0 8266200.0 12248400.0 12891300.0 10280300.0 11711700.0 11247500.0 11270000.0 False True 11757767.983929178 12837731.53370173 9947925.883328693 9051817.162676346 13212279.39613709 12810840.61491506 11319533.050059386 11671074.84623133 9205237.526401537 11170156.56792732 1.05260547714157 1.1492884146818936 0.8905807025025955 0.810357232473059 1.1828195348732429 1.1468810250787898 1.013372819013206 1.044844338148517 0.8240920769931174 1.0 23.413146071893934 -7.7350640514264 24.789710107490684 0.9120459811837435 1.0355183160499557 0.1546553766552785 0.11622759946457868 347.4453672028598 326559.47906023596 0.08331828380987738 0.03147014790538953 1.8405005373282903e-08 7.7350640514264 0.12347233486621223 YDRPQDSEFS(ph)PVDNCLQSVLGQR ddPTM_KYSE-520_SHP099_60min_R1 1 YDRPQDSEFSPVDNCLQSVLGQR 23 1 Q9ULQ0 Q9ULQ0 STRIP2 Striatin-interacting protein 2 1 YDRPQDS(0.004)EFS(0.996)PVDNCLQSVLGQR 162.44 1.6594999999999998e-10 85400000.0 36434.0 39045.0 40662.0 30051.0 38868.0 41063.0 29899.0 47560.0 37416.0 35812.0 True False 34412.933390621656 37169.21959226015 43283.137581500305 32907.038004837406 41926.69047133149 40806.71058545355 32921.48270612002 47395.02546058745 30622.197580603675 35494.733541314396 0.9695222349131437 1.0471756197013489 1.2194242148943175 0.9270963526613034 1.1812087678452512 1.1496553576872532 0.9275033060270979 1.335269228191884 0.8627251010339523 1.0 15.115317363111505 -1.1801962232559444 19.923531755834226 1.0735020285640045 0.06191041249462326 0.0 0.14536162150988835 0.0 0.0 0.030418150486477478 0.0 0.06603950004298177 1.1801962232559444 -1.0115916160693812 YDS(ph)SNQVK ddPTM_KYSE-520_SHP099_60min_R1 3 YDSSNQVK 8 0 A0A087WZ12;A0A087WT34;A0A087X1H1;A0A0A0MTS6;K7EIE8;O95983-2;O95983 A0A087WZ12 MBD3 Methyl-CpG-binding domain protein 3 1 Y(0.001)DS(0.988)S(0.012)NQVK;YDS(0.5)S(0.5)NQVK;YDS(0.781)S(0.219)NQVK 133.42 0.00076192 1573260000.0 2110410.0 2072090.0 2084720.0 2044340.0 2186430.0 2257420.0 2476640.0 2623570.0 3066510.0 2467620.0 True False 1993341.3503019672 1972543.6861295009 2219104.386869936 2238633.4589467663 2358489.601915029 2243330.604432568 2727002.9408771233 2614469.4480158384 2509709.08442637 2445758.8065793114 0.8150195943032893 0.8065160312714323 0.9073275667659236 0.9153124392007261 0.9643181476319249 0.9172329660626415 1.114992587797799 1.0689808990905727 1.026147418001737 1.0 21.22185070593307 -5.563513757377643 0.6465015753963476 1.0543327450260886 0.7881574515508906 0.7655378436663887 0.046610151614489365 0.4701292693522843 0.3871008489959991 0.030260200186265355 0.07433986207708172 2.732034898382946e-06 5.563513757377643 -0.2661752934751981 YDSDRYR ddPTM_KYSE-520_SHP099_60min_R1 2 YDSDRYR 7 1 E7EX17;P23588-2;P23588;F8VX11 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ; 113.41 0.0031235 951040000.0 1242010.0 1551940.0 984030.0 673780.0 1096360.0 1149810.0 777220.0 857990.0 1310480.0 834250.0 False True 1173113.229414448 1477382.4728905698 1047462.1483036695 737815.8486206561 1182637.294564912 1142633.6092896378 855788.9825362256 855013.8329463715 1072529.8665124406 826859.1940366784 1.418758160851278 1.7867400925640975 1.266796276630874 0.8923113559621706 1.4302765248232239 1.3818962376306987 1.034987563430617 1.034050100806455 1.297113068642815 1.0 19.65728214801667 -4.907227599877295 6.225309734836555 1.1639912400800043 1.5970430478376576 0.48019190075861484 0.18410894909454695 0.1714706943217885 9.455128358721382 0.04854122740965217 0.10309780293566322 1.2381475428624143e-05 4.907227599877295 0.4330518077576533 YDTEHLHPDLWQIFDNPVDWK ddPTM_KYSE-520_SHP099_60min_R1 2 YDTEHLHPDLWQIFDNPVDWK 21 0 O60568;H7C2S8 O60568 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 0 ; 155.28 3.5536000000000003e-07 331540000.0 305091.0 251636.0 183537.0 184646.0 308890.0 255133.0 224783.0 192767.0 199139.0 165447.0 False True 288166.99404617 239547.0288466633 195368.08868958295 202194.7003241556 333197.8856563133 253540.62031021906 247506.25931067177 192098.33626915616 162980.37748567012 163981.2682958184 1.7573165340221875 1.4608194663705494 1.1914049130120365 1.233035348643609 2.031926506722902 1.5461559905295872 1.509356903278588 1.171465120775961 0.9938963101057209 1.0 17.323171498547456 -7.394257016191162 2.633349726578492 1.0025021931518885 1.528327279982926 0.49284835909841596 0.22648796407429694 0.27933283841404155 3.6473618536289827 0.1750073594912695 0.06769842721572056 4.03406585628118e-08 7.394257016191162 0.5258250868310375 YDVDTLDMVFLDHWK ddPTM_KYSE-520_SHP099_60min_R1 2 YDVDTLDMVFLDHWK 15 0 H7BZ45;E7EMS6;E7EUU8;P21964-2;P21964 H7BZ45 COMT Catechol O-methyltransferase 0 ; 192.32 6.9559e-11 179297000.0 428570.0 329170.0 217670.0 303770.0 438130.0 409480.0 321010.0 289290.0 287480.0 255390.0 False True 404796.367766886 313356.1791057569 231701.3564843141 332640.209468219 472608.3383813026 406924.2834311064 353460.8235556907 288286.5205107934 235280.87878105458 253127.44329041342 1.5991800908859284 1.2379383880010315 0.9153545481770733 1.3141214762975364 1.8670766481810448 1.6075865901440078 1.3963749602217752 1.1388987174339762 0.9294957343329879 1.0 17.94950440287581 -7.422399320163688 2.921928131871161 0.9725656305778136 1.4143662096233278 0.3796523122527695 0.23892455940645801 0.34362270177407817 5.519562083143074 0.1909935701806089 0.07427453588160352 3.780947785451999e-08 7.422399320163688 0.4418005790455142 YDWDLLAAR ddPTM_KYSE-520_SHP099_60min_R1 1 YDWDLLAAR 9 0 Q15029-3;Q15029;Q15029-2;K7EJ74;K7EP67 Q15029-3 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component 0 97.635 0.021924000000000003 124420000.0 183260.0 220100.0 148670.0 165930.0 217810.0 200600.0 154100.0 162170.0 157790.0 167650.0 False True 173094.20248024724 209526.06562316453 158253.50608041033 181699.93731132618 234950.4078306246 199347.98099120814 169677.93187106907 161607.4701207624 129139.31356220483 166164.7514297263 1.0417022923989478 1.2609537451255202 0.9523891482324289 1.0934926676562324 1.4139605771323218 1.1997007745383084 1.0211427538699658 0.9725737181336483 0.7771763412580307 1.0 17.342254849740772 -7.08469893007131 2.4416804351329517 0.8998596482811391 1.1623055262083275 0.4162068805593614 0.12993452387759008 0.30511344187349504 3.5370087680462814 0.0775177643033435 0.03974191409117312 8.22812858348716e-08 7.08469893007131 0.26244587792718843 YEAVS(ph)PERLELER ddPTM_KYSE-520_SHP099_60min_R1 1 YEAVSPERLELER 13 1 Q92585 Q92585 MAML1 Mastermind-like protein 1 1 Y(0.001)EAVS(0.999)PERLELER 54.974 0.040535 180710000.0 240190.0 212510.0 233980.0 156650.0 214610.0 212600.0 178180.0 174300.0 252840.0 220700.0 True False 226866.18189310553 202300.7006159868 249062.7251812369 171537.96890145997 231498.58603613378 211273.08454003438 196192.1732692217 173695.3939819259 206930.62957771603 218744.76970200185 1.03712734344308 0.9248253153279187 1.1385996818142783 0.7841923221073941 1.0583045544426346 0.9658429082800644 0.8968999511919586 0.7940550725786626 0.9459912109424132 1.0 17.738888996226603 -6.722448255664314 4.6538486225100435 0.8914754364012201 0.984415036275256 0.11297464093112108 0.09998930231907194 0.3697024632335813 17.949100950889235 0.038468649984504555 0.028318382908955164 1.8947492522026598e-07 6.722448255664314 0.09293959987403588 YEDFKEEGSENAVK ddPTM_KYSE-520_SHP099_60min_R1 4 YEDFKEEGSENAVK 14 1 J3KQ32;Q9NTK5;Q9NTK5-2 J3KQ32 OLA1 Obg-like ATPase 1 0 ;;; 189.1 1.0984e-10 3909780000.0 4300400.0 4016160.0 2438270.0 2562470.0 4226530.0 4069470.0 3113590.0 3571220.0 3426970.0 3605320.0 False True 4061848.23936513 3823217.6452209367 2595444.7855699384 2806006.3783653025 4559133.8653338635 4044070.9282367523 3428342.062910074 3558832.271349013 2804718.6348835095 3573379.669696515 1.1366965211704192 1.069916437271733 0.7263277416559456 0.7852527964383966 1.2758604701305272 1.1317215918957229 0.9594116438237981 0.9959289525065391 0.7848924251370447 1.0 21.76885777697486 -7.56598753290577 22.44611254892648 0.8917662213235733 1.0071422388000357 0.07817564268770871 0.16185205914872342 150.66422374965052 78441.84955413811 0.11769133089798067 0.04448333446688569 2.7165172495453546e-08 7.56598753290577 0.11537601747646242 YEDHTIFHDISLR ddPTM_KYSE-520_SHP099_60min_R1 1 YEDHTIFHDISLR 13 0 P82675 P82675 MRPS5 28S ribosomal protein S5, mitochondrial 0 237.53 9.618499999999998e-16 673300000.0 71133.0 85147.0 48287.0 55946.0 70979.0 69279.0 65193.0 53362.0 62850.0 51159.0 False True 67187.11068988005 81056.41031174746 51399.657281931686 61263.09101922175 76564.64348473394 68846.60406325979 71783.34466236614 53176.899676784444 51438.0243195676 50705.7710610997 1.3250387339326835 1.5985638047802426 1.0136845610728582 1.208207463118954 1.509978881742567 1.3577666333147889 1.415683918421599 1.0487346620310156 1.0144412212484757 1.0 15.629862335997148 -7.30289421156399 7.177213695683511 1.021199637917731 1.3451377422276687 0.49601967851820794 0.15057283862297285 0.2320039552579792 33.65276958119832 0.0857575899161662 0.041310540171763104 4.978583419681262e-08 7.30289421156399 0.32393810430993764 YEDKPEPEVDALGS(ph)PPALLK ddPTM_KYSE-520_SHP099_60min_R1 11 YEDKPEPEVDALGSPPALLK 20 1 Q68DQ2 Q68DQ2 CRYBG3 Very large A-kinase anchor protein 1 YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK;YEDKPEPEVDALGS(1)PPALLK 201.98 1.1957e-16 35468110000.0 6887770.0 6697820.0 6163510.0 6341550.0 6566520.0 7542470.0 7438750.0 8059990.0 9688030.0 7949480.0 True False 6505691.667670914 6376046.673567209 6560819.716564688 6944249.005343472 7083267.765612014 7495394.646992803 8190731.445203859 8032031.775905816 7928927.967361971 7879053.791801851 0.8256945363718776 0.8092401501562891 0.8326913218172486 0.8813557044843324 0.8989997977907128 0.9513064442829106 1.039557751684131 1.0194157811516833 1.0063299701814465 1.0 22.909590953848497 -6.075081075124391 1.0452048018873128 1.0213314086943026 0.8189978306879959 0.9536466509719035 0.017924375445709524 0.10025912961989558 0.23337817278060585 0.00959400011023283 0.010449111782815355 8.412380826641881e-07 6.075081075124391 -0.2023335780063067 YEDMAAFMK ddPTM_KYSE-520_SHP099_60min_R1 6 YEDMAAFMK 9 0 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 ;;;;; 174.16 5.901799999999999e-06 4967670000.0 6004490.0 6703630.0 4199770.0 3891070.0 5940890.0 6437750.0 5048320.0 5237290.0 5228170.0 5241080.0 False True 5671408.9700459335 6381577.552446228 4470493.894069584 4260876.12290715 6408404.243959778 6397569.614287883 5558653.45245526 5219123.063382678 4278866.119440473 5194648.108698535 1.091779241128779 1.2284908272728152 0.8605960982388122 0.8202434570634791 1.2336551215526583 1.2315693922702933 1.0700731476203733 1.0047115712502563 0.8237066361194768 1.0 22.30859459198007 -7.530211720284989 4.807621007401803 0.909740505024775 1.0744996111504541 0.17705588299720765 0.1414994886523109 0.34503766509476097 22.16468612252702 0.10383742405216666 0.0401285010656682 2.949770851081277e-08 7.530211720284989 0.16475910612567912 YEDRYDR ddPTM_KYSE-520_SHP099_60min_R1 6 YEDRYDR 7 1 E7EX17;P23588-2;P23588;F8VX11;F8VP89 E7EX17 EIF4B Eukaryotic translation initiation factor 4B 0 ;;;;; 162.25 0.0010225 7062140000.0 5869220.0 5307280.0 3772080.0 3477940.0 5592040.0 5424550.0 4487780.0 4875720.0 4855480.0 4697980.0 False True 5543642.6666 5052310.302410307 4015234.3123413976 3808482.371919207 6032101.7336447565 5390693.37131534 4941448.5989120435 4858807.265321599 3973847.2286901185 4656359.552173134 1.1905529640666965 1.0850344020474927 0.8623119128477693 0.8179098562398986 1.2954544566537094 1.1577055661003435 1.061225737304985 1.043477680552822 0.8534236207845064 1.0 22.150771033092134 -7.641593192512074 7.102674853144173 0.9281724928750844 1.061856450102778 0.1376206702212468 0.13819894432432162 0.4836368481714546 27.539572615140727 0.10296432869058424 0.03810605846968073 2.282479089342481e-08 7.641593192512074 0.13368395722769366 YEDSDKPFVDS(ph)PASR ddPTM_KYSE-520_SHP099_60min_R1 1 YEDSDKPFVDSPASR 15 1 E9PQ01;E9PKN0;O94913 E9PQ01 PCF11 Pre-mRNA cleavage complex 2 protein Pcf11 1 YEDSDKPFVDS(0.972)PAS(0.028)R 121.26 7.6885e-05 323550000.0 899070.0 841110.0 774330.0 724280.0 822650.0 853070.0 721530.0 785930.0 1025600.0 906450.0 True False 849196.7948483891 800701.8130681512 824244.5507718042 793115.3534372767 887387.8747617791 847745.6736997502 794469.2938542011 783203.792267441 839376.8932720522 898419.5582074277 0.9452118301417543 0.8912337290004595 0.9174383429679321 0.8827895009540316 0.9877210114752404 0.9435966369556952 0.8842965256003181 0.8717572821212052 0.9342816344590934 1.0 19.777029809367814 -6.853666657176257 0.005696093693657487 1.8487369781357625 2.348617746441835e-07 0.12934609174275158 0.039436778513802 13345.153111777301 50.33972101252171 8105.815030458256 8228.763613874193 1.400661988502773e-07 6.853666657176257 -1.8487367432739878 YEEIVK ddPTM_KYSE-520_SHP099_60min_R1 7 YEEIVK 6 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ;;;;;; 129.96 0.055300999999999996 21143900000.0 40857900.0 40147900.0 30154400.0 25435400.0 38298100.0 36300900.0 30708600.0 31647700.0 32520700.0 32504800.0 False True 38591430.838795625 38219134.620773554 32098200.87274587 27852772.768568117 41311942.58361898 36074332.61796486 33812924.97505456 31537921.515328698 26615760.66013301 32216832.76035174 1.197865448967687 1.1863094955693056 0.9963177048318709 0.8645409986684248 1.28230924780602 1.1197355396884459 1.049542182702301 0.9789268159886109 0.8261445455584387 1.0 24.94131133375156 -7.27943036265892 2.5182200424888053 0.9128995941644968 1.1015399325983974 0.31140949126709006 0.11564353549209248 0.3904839599783977 4.786332791251955 0.08050300705534483 0.034529603964744235 5.254962695290898e-08 7.27943036265892 0.1886403384339006 YEESNLGLLES(ph)SVGDSRLPLVLR ddPTM_KYSE-520_SHP099_60min_R1 1 YEESNLGLLESSVGDSRLPLVLR 23 1 Q86TU7 Q86TU7 SETD3 Histone-lysine N-methyltransferase setd3 1 YEESNLGLLES(0.551)S(0.448)VGDS(0.001)RLPLVLR 72.881 0.010079000000000001 132080000.0 13349.0 12191.0 10456.0 17387.0 7527.6 10392.0 10787.0 7776.2 13123.0 12633.0 True False 12608.504359428242 11605.326060935937 11130.010490191511 19039.455252407843 8119.979293814837 10327.139673283324 11877.455230974841 7749.226177178722 10740.194003909079 12521.081448325273 1.006982057537423 0.926862915861647 0.8889016924077416 1.5205919177975173 0.6485046301572381 0.8247801690216308 0.9485965952696108 0.6188943190857689 0.8577688794880899 1.0 13.612071553062513 YEFLWGPR ddPTM_KYSE-520_SHP099_60min_R1 4 YEFLWGPR 8 0 P43355;Q3SYA6;Q8TD91-2;A0A0A0MSA3;O60732-2;P43361;A2A368;A8MXT2;Q96M61;O15480;O60732;P43358;P43363 P43355;P43358;P43363 MAGEA1;MAGEC3;MAGEB16;MAGEC1;MAGEA8;MAGEB17;MAGEB18;MAGEB3;MAGEA4;MAGEA10 Melanoma-associated antigen 1;Melanoma-associated antigen C1;Melanoma-associated antigen 8;Melanoma-associated antigen B16;Melanoma-associated antigen B17;Melanoma-associated antigen B18;Melanoma-associated antigen B3;Melanoma-associated antigen 4;Melanoma-associated antigen 10 0 ;;; 148.33 0.0034347 1204234000.0 1006948.0 1104685.0 838045.0 759903.0 1354378.0 1025130.0 953550.0 878775.0 897670.0 855537.0 False True 951090.5871389275 1051614.2744340105 892066.7216194093 832123.9526468328 1460959.8432433119 1018731.783417335 1049944.1397511864 875726.7346326276 734675.7564191921 847957.6077777147 1.1216251595778457 1.2401731699654528 1.0520180648621027 0.9813273034103933 1.722916133829052 1.2013947089727477 1.2382035730569456 1.0327482489692956 0.8664062326707509 1.0 19.693632615902633 -7.402674175528355 3.373376280474961 0.9349667152987097 1.226095955620054 0.2852160579828438 0.18945006501388117 0.343161596533666 7.135423252170672 0.12839824812759504 0.05325163584618732 3.9566335065177103e-08 7.402674175528355 0.29112924032134424 YELHLK ddPTM_KYSE-520_SHP099_60min_R1 3 YELHLK 6 0 Q02790 Q02790 FKBP4 Peptidyl-prolyl cis-trans isomerase FKBP4;Peptidyl-prolyl cis-trans isomerase FKBP4, N-terminally processed 0 ;; 92.69200000000001 0.022598 1652120000.0 5746810.0 5109300.0 3319410.0 3136490.0 5414670.0 4956800.0 3713100.0 4204810.0 4064810.0 3953630.0 False True 5428022.993318287 4863841.558784348 3533384.4798437813 3434581.066579893 5840773.723742012 4925862.772568401 4088456.384363838 4190224.495520034 3326742.9695214243 3918603.914077593 1.3851930719045378 1.2412179606392437 0.9016947252949169 0.8764807931317461 1.4905241386502524 1.2570453356799416 1.0433451489383885 1.0693156510324107 0.8489612735724815 1.0 21.90190832443457 -7.262718250075535 2.0109184354399545 0.9417326917465937 1.1759100765249022 0.22181773073752353 0.18579874525701853 0.6201623550665477 4.688284479554657 0.14476906409165846 0.05901647649166417 5.461120381113058e-08 7.262718250075535 0.23417738477830852 YEMACAIADAFNLPSS(ph)HLRPITDSPVLGAQRPR ddPTM_KYSE-520_SHP099_60min_R1 1 YEMACAIADAFNLPSSHLRPITDSPVLGAQRPR 33 2 Q9NZL9;Q9NZL9-2 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta 1 YEMACAIADAFNLPS(0.078)S(0.387)HLRPIT(0.287)DS(0.248)PVLGAQRPR 48.088 0.042682 19499000.0 11298.0 11590.0 16340.0 13818.0 10831.0 13706.0 11289.0 14280.0 13759.0 11387.0 True False 10671.277417995376 11033.199003055324 17393.30254492439 15131.258565466806 11683.338080039917 13620.455770017441 12430.202290022713 14230.466012977058 11260.712436164365 11286.120038951949 0.9455222327217363 0.9775900810000501 1.5411232987859986 1.3406962280433024 1.0351952699171234 1.2068324386954032 1.1013707321136206 1.26088203597545 0.9977487743617919 1.0 13.462261978802186 -7.777899645173993 24.41784875777854 0.9988740393366625 1.1810148260735844 0.1487521589824592 0.1693130380359934 423.9596147848591 628895.5815506635 0.1698270721332364 0.044410853323833745 1.6676325170938086e-08 7.777899645173993 0.1821407867369219 YEMACAIADAFNLPSSHLRPITDS(ph)PVLGAQRPR ddPTM_KYSE-520_SHP099_60min_R1 1 YEMACAIADAFNLPSSHLRPITDSPVLGAQRPR 33 2 Q9NZL9;Q9NZL9-2 Q9NZL9 MAT2B Methionine adenosyltransferase 2 subunit beta 1 YEMACAIADAFNLPS(0.141)S(0.168)HLRPIT(0.105)DS(0.586)PVLGAQRPR 44.721000000000004 0.050155 25527000.0 17614.0 23270.0 20717.0 27408.0 16297.0 17858.0 16407.0 16532.0 18552.0 15357.0 True False 16636.916307361513 22152.0742710179 22052.450968371988 30012.848079484338 17579.48118275419 17746.541597911248 18065.579676889232 16474.654350597808 15183.424457861864 15220.948927565212 1.0930275363602315 1.455367492292178 1.4488223482857165 1.9718118904617652 1.1549530365296519 1.1659287264128568 1.186889185612625 1.082367100040795 0.9975346826349708 1.0 13.893770683884801 -5.966658168665622 24.999988428941013 1.1049050144087869 1.496127888962367 0.4682827043905273 0.2064342736129736 176.10677409065173 132045.62888592738 0.06552874361058297 0.07430222976423288 1.0797962908951107e-06 5.966658168665622 0.3912228745535802 YEPQS(ph)PGYEPR ddPTM_KYSE-520_SHP099_60min_R1 6 YEPQSPGYEPR 11 0 Q9H5H4;H3BS42 Q9H5H4 ZNF768 Zinc finger protein 768 1 YEPQS(1)PGYEPR;YEPQS(0.99)PGY(0.009)EPR;YEPQS(0.997)PGY(0.003)EPR;YEPQS(0.982)PGY(0.018)EPR;YEPQS(0.998)PGY(0.002)EPR;YEPQS(1)PGYEPR 108.38 0.00046787 3569910000.0 5101640.0 5880110.0 5441770.0 5085520.0 5271350.0 6942220.0 5149940.0 6402650.0 7480730.0 6746220.0 True False 4818641.859332796 5597620.6893749535 5792555.201339858 5568846.291782656 5686175.255121268 6898891.029894241 5670546.193770885 6380440.701539739 6122418.005857107 6686453.739279734 0.7206573240798135 0.8371583663985582 0.8663120133937894 0.8328549794741469 0.8504022426294068 1.0317712944556154 0.8480648210364672 0.9542338809670792 0.9156450107312961 1.0 22.672809828137936 -1.7989959440020744 0.24527565766256218 0.9758303226484448 1.3408445742756345e-12 0.6164113572893808 0.0537872494284432 23.900493060466726 0.4547219344702699 0.0718597412406664 8.830610175821349 0.015885615845505085 1.7989959440020744 -0.975830322647104 YEPSDKDRQS(ph)PPPAK ddPTM_KYSE-520_SHP099_60min_R1 16 YEPSDKDRQSPPPAK 15 2 E7ERS3;Q86VM9;H3BRH3 E7ERS3 ZC3H18 Zinc finger CCCH domain-containing protein 18 1 YEPS(0.02)DKDRQS(0.98)PPPAK;YEPSDKDRQS(1)PPPAK;YEPSDKDRQS(1)PPPAK;YEPSDKDRQS(1)PPPAK;YEPSDKDRQS(1)PPPAK;YEPS(0.002)DKDRQS(0.998)PPPAK;YEPSDKDRQS(1)PPPAK;YEPSDKDRQS(1)PPPAK;YEPSDKDRQS(1)PPPAK;YEPSDKDRQS(1)PPPAK;YEPSDKDRQS(1)PPPAK;YEPSDKDRQS(1)PPPAK;YEPSDKDRQS(1)PPPAK;YEPS(0.002)DKDRQS(0.998)PPPAK;YEPS(0.005)DKDRQS(0.995)PPPAK;YEPSDKDRQS(1)PPPAK 188.41 3.2021999999999994e-11 56669640000.0 32875110.0 27952840.0 26421880.0 28183590.0 28313720.0 28114510.0 27924040.0 30001040.0 34138550.0 26505200.0 True False 31051462.11339294 26609943.608331762 28125076.66130272 30862149.91989465 30541848.68097019 27939036.914542034 30746874.475567903 29896973.39453537 27939849.882812627 26270384.54873359 1.1819949592207182 1.0129255458353974 1.0706001128049167 1.1747886622155448 1.1625961783815042 1.0635183837036328 1.1704006242668463 1.1380485633575017 1.063549329892071 1.0 24.646933983163873 -8.009615993055071 3.972676556775242 1.0002404186080411 1.1190138833753485 0.3413523740291575 0.05358642660095018 0.22485987908817667 10.03702590660204 0.05275631485680904 0.013873709367461646 9.781016847031412e-09 8.009615993055071 0.11877346476730732 YESLTDPSK ddPTM_KYSE-520_SHP099_60min_R1 3 YESLTDPSK 9 0 P08238;Q58FF7;Q58FF6;P07900;P07900-2;G3V2J8;Q58FF8 P08238;P07900;Q58FF8 HSP90AB1;HSP90AB3P;HSP90AB4P;HSP90AA1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Putative heat shock protein HSP 90-beta 4;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 2 0 ;; 146.69 0.0024529 1957680000.0 4650900.0 5823400.0 3856200.0 3150030.0 5398900.0 6062200.0 4776400.0 5724700.0 5198600.0 5763400.0 False True 4392905.305660702 5543635.1228983905 4104776.822138148 3449407.9041089443 5823762.714461035 6024363.561141093 5259245.125171799 5704842.351855029 4254665.286041428 5712340.759857346 0.7690201776006104 0.9704664612894751 0.718580524989664 0.6038519144987222 1.0195054810782107 1.05462258195037 0.9206812664486664 0.9986873318106282 0.74481993720341 1.0 22.445650612748064 -5.786505182333671 24.999973031539 0.9594470719076169 0.7767715954964063 0.392893980809377 0.11588038756432775 256.08143810204695 255407.47890761524 0.03730276427656767 0.0423138815418174 1.634913641974359e-06 5.786505182333671 -0.18267547641121062 YESLTDPSKLDSGK ddPTM_KYSE-520_SHP099_60min_R1 4 YESLTDPSKLDSGK 14 1 P08238;Q58FF7;P07900;P07900-2;G3V2J8;Q58FF8 P08238;P07900;Q58FF8 HSP90AB1;HSP90AB3P;HSP90AA1;HSP90AB2P Heat shock protein HSP 90-beta;Putative heat shock protein HSP 90-beta-3;Heat shock protein HSP 90-alpha;Putative heat shock protein HSP 90-beta 2 0 ;;; 133.48 1.3128e-05 2127590000.0 7034800.0 7585700.0 5158650.0 4377210.0 6704400.0 6755600.0 4783810.0 5723980.0 6551200.0 5552810.0 False True 6644565.620473879 7221271.585632162 5491184.833131837 4793218.722343825 7231998.137182134 6713435.794537411 5267404.200286434 5704124.849366977 5361667.222312665 5503616.423420805 1.2073089963533308 1.3120957258034598 0.9977411960913437 0.8709216547043757 1.3140447263741255 1.2198226180822094 0.9570805439621187 1.036432122175685 0.9742080133884202 1.0 22.391948493704245 -1.0000000000000002 0.27167709864820555 1.0103162352385386 2.677228914695353 0.19599789336302842 0.13559441055037783 95.82285899026634 1.3406126900219095 0.16992880532000904 75.06426357819677 0.09999999999999995 1.0000000000000002 1.6669126794568145 YESQEPLAGQES(ph)PLPLATR ddPTM_KYSE-520_SHP099_60min_R1 12 YESQEPLAGQESPLPLATR 19 0 Q9C0C2;Q9C0C2-2 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 YESQEPLAGQES(0.998)PLPLAT(0.002)R;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(0.999)PLPLAT(0.001)R;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(1)PLPLATR;YESQEPLAGQES(0.999)PLPLAT(0.001)R;YESQEPLAGQES(1)PLPLATR 466.0 2.167799999999999e-142 26843310000.0 12950240.0 14663620.0 10636310.0 8423860.0 9427410.0 13844950.0 10043680.0 13129160.0 15483470.0 13476720.0 True False 12231864.371536601 13959157.684657643 11321943.561297726 9224461.121674143 10169293.53237459 13758538.531526545 11058993.19127072 13083618.008328963 12672062.154515449 13357326.745529488 0.9157419448191935 1.0450562414616067 0.8476204690498437 0.6905918599888591 0.7613270024840946 1.0300368324920506 0.8279346161066257 0.9795087188915154 0.9486974748713557 1.0 23.671127968665022 -7.356377776042589 1.1487805920834946 0.9915869427948446 0.8684170275959611 0.1549883229421295 0.10387650101553547 1.0632707306256188 2.4688838441021796 0.1013029406461901 0.03767259005539197 4.40171808425716e-08 7.356377776042589 -0.12316991519888354 YEWDVAEAR ddPTM_KYSE-520_SHP099_60min_R1 7 YEWDVAEAR 9 0 P13639 P13639 EEF2 Elongation factor 2 0 ;;;;;; 221.16 3.3452e-08 7268690000.0 7345940.0 6843800.0 4846560.0 4546480.0 7653300.0 7353340.0 6002550.0 6049510.0 5471150.0 6134450.0 False True 6938446.06443166 6515013.575246766 5158977.012370179 4978576.092250946 8255571.168679667 7307445.077477027 6609346.333242617 6028525.661776252 4477727.076467811 6080103.545529877 1.1411723521604893 1.071530036694299 0.848501505564504 0.8188308069047969 1.3578010813235581 1.2018619457310884 1.0870450287153155 0.9915169399061394 0.7364557269357458 1.0 22.53566446262304 -7.5471804864411824 7.984558570714097 0.8656497361158133 1.070034904530964 0.21152109963171173 0.15889495478399077 0.344517359893422 89.35986967161136 0.1147063578769904 0.04387042309032553 2.8367398757945774e-08 7.5471804864411824 0.20438516841515075 YEYDPDIS(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 6 YEYDPDISPPR 11 0 Q9BRD0;H7C462 Q9BRD0 BUD13 BUD13 homolog 1 YEYDPDIS(1)PPR;YEYDPDIS(1)PPR;YEYDPDIS(1)PPR;YEYDPDIS(1)PPR;YEYDPDIS(1)PPR;YEYDPDIS(1)PPR 126.34 0.00018039 7624750000.0 9484300.0 9212000.0 8143010.0 9935500.0 8395770.0 8730900.0 8930300.0 9654700.0 10696000.0 8598720.0 True False 8958186.972516675 8769441.692506095 8667921.45387667 10879766.932783002 9056469.33360324 8676407.214537086 9833061.875329074 9621210.099123916 8753876.0242179 8522542.030502928 1.0511167842240654 1.0289701900113242 1.0170582231044936 1.2765870668450046 1.0626488319082896 1.0180539073299328 1.1537710040191858 1.1289131886576513 1.0271437785682964 1.0 23.022852378626165 YEYHWADGTNIK ddPTM_KYSE-520_SHP099_60min_R1 3 YEYHWADGTNIK 12 0 D6RCK3;Q9H8S9-2;Q9H8S9;Q7L9L4;Q7L9L4-2 D6RCK3 MOB1B;MOB1A MOB kinase activator 1A;MOB kinase activator 1B 0 ;; 200.93 8.690100000000001e-09 467500000.0 1386780.0 1394240.0 980720.0 850580.0 1403380.0 1300900.0 1123920.0 1071790.0 1180650.0 1058170.0 False True 1309852.548922608 1327258.617603095 1043938.7804074804 931418.8674637971 1513818.0218600705 1292780.6005556455 1237536.8020021536 1068072.2106476673 966273.7217644779 1048795.4370438028 1.2489113726644694 1.2655076201934907 0.9953693003756656 0.888084400985906 1.4433873073733121 1.2326337004283254 1.1799601316824455 1.01837991749678 0.9213176255686948 1.0 20.000301883329243 -7.359326659676564 3.608605595294776 0.963165787429046 1.1767797038406995 0.2912802604290696 0.14389720689780414 0.35280127123905625 8.459482239024718 0.0959258917534605 0.041826739425578956 4.371931415195221e-08 7.359326659676564 0.2136139164116535 YFAGWADK ddPTM_KYSE-520_SHP099_60min_R1 1 YFAGWADK 8 0 P47895;H0YKF9;P30837 P47895 ALDH1A3;ALDH1B1 Aldehyde dehydrogenase family 1 member A3;Aldehyde dehydrogenase X, mitochondrial 0 124.08 0.0067443 1962900000.0 3540100.0 3038200.0 2268500.0 2040700.0 2876500.0 3139900.0 2602900.0 2608300.0 2906000.0 2617200.0 False True 3343723.595985611 2892240.311568824 2414731.1397283347 2234647.5144411726 3102864.1849538195 3120302.7194132316 2866026.5338559737 2599252.416081799 2378343.6542985397 2594013.644150789 1.289015423463687 1.1149672701570028 0.9308860595908136 0.8614632846978477 1.1961634018195824 1.2028860088878737 1.1048617806303924 1.0020195622111792 0.9168585753823767 1.0 21.306754637308895 -4.357742629206228 3.482279631807984 1.035648165921533 1.2975565202754493 0.348123812550605 0.1083047197106762 0.32357852690357103 6.386365962436942 0.030563422263343094 0.18598578536495264 4.3879065604757186e-05 4.357742629206228 0.26190835435391624 YFDDEFTAQSITIT(ph)PPDR ddPTM_KYSE-520_SHP099_60min_R1 4 YFDDEFTAQSITITPPDR 18 0 P31751-2;P31751;M0R283;M0R0P9 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 YFDDEFTAQSIT(0.001)IT(0.999)PPDR;YFDDEFTAQSIT(0.001)IT(0.999)PPDR;YFDDEFTAQSIT(0.008)IT(0.992)PPDR;YFDDEFTAQSIT(0.004)IT(0.996)PPDR 144.25 2.6868e-05 561500000.0 469018.0 448147.0 332803.0 384341.0 349548.0 484990.0 381317.0 464882.0 446700.0 524333.0 True False 443000.636575797 426617.34543763875 354256.0138836273 420868.65308366466 377055.43894393794 481962.99751209427 419864.24365529156 463269.43284627504 365590.5403906261 519687.8175449017 0.8524360618430721 0.8209108065166035 0.6816708068262908 0.8098489879403438 0.7255421932444277 0.9274086889105344 0.8079162710390354 0.8914379310156678 0.703481066994684 1.0 18.98728571436709 -6.252182424293546 24.932986176230063 0.8556303811324097 0.7768698458410318 0.2044464521070949 0.08552065084398822 1166.122327861086 3140874.8630121276 0.027254289940742915 0.026900057256054162 5.595225261118561e-07 6.252182424293546 -0.07876053529137794 YFDDEFTAQSITIT(ph)PPDRYDSLGLLELDQR ddPTM_KYSE-520_SHP099_60min_R1 4 YFDDEFTAQSITITPPDRYDSLGLLELDQR 30 1 P31751-2;P31751 P31751-2 AKT2 RAC-beta serine/threonine-protein kinase 1 YFDDEFTAQS(0.001)IT(0.021)IT(0.968)PPDRY(0.009)DS(0.001)LGLLELDQR;YFDDEFTAQSITIT(1)PPDRYDSLGLLELDQR;YFDDEFTAQSITIT(1)PPDRYDSLGLLELDQR;YFDDEFTAQSITIT(1)PPDRYDSLGLLELDQR 274.5 3.8571e-41 816611000.0 287591.0 346379.0 269373.0 266792.0 227748.0 304237.0 241300.0 292764.0 394329.0 286276.0 True False 271637.7539315549 329738.4329145209 286737.2145920387 292147.8314660601 245670.47189113928 302338.1440320147 265692.9588610576 291748.4700156313 322728.793825151 283739.81735935813 0.9573480255946035 1.1621154760133832 1.0105638935718506 1.0296328311794645 0.8658300910231298 1.0655471158251353 0.9363964540956756 1.0282253394352832 1.1374110155869068 1.0 18.114209093417443 -10.251698954130916 4.641524235765582 0.9999932983156954 1.0199271155329916 0.005508821208321302 0.08425634651283116 5.772407140427897e-06 9.304577622732668e-07 0.08059205794910733 0.019539873670700595 5.601457508713423e-11 10.251698954130916 0.019933817217296257 YFDEHYEYR ddPTM_KYSE-520_SHP099_60min_R1 3 YFDEHYEYR 9 0 P33552 P33552 CKS2 Cyclin-dependent kinases regulatory subunit 2 0 ;; 129.38 0.0010042999999999999 1535060000.0 2451730.0 2172010.0 1532780.0 1617090.0 2389300.0 2467890.0 1998520.0 1943290.0 1658350.0 2066200.0 False True 2315727.6494974135 2067663.3793465255 1631585.4513347119 1770777.7474041642 2577324.3167426237 2452486.983092684 2200549.9052755926 1936549.1805572957 1357235.4436015086 2047895.075479273 1.130784324463234 1.0096529866710218 0.7967134014191956 0.8646818719409956 1.2585236165673417 1.197564764160939 1.0745423101135168 0.9456291016785033 0.6627465732265957 1.0 20.965710369640846 -7.527559877379374 23.955932422329084 0.8223113391730201 1.0408820816590103 0.245552544737471 0.15159387004807764 121.64867444632898 622498.5414105576 0.10930333864504228 0.0416968813762783 2.9678375312991896e-08 7.527559877379374 0.21857074248599018 YFDNKDDDS(ph)DTETSNDLPK ddPTM_KYSE-520_SHP099_60min_R1 5 YFDNKDDDSDTETSNDLPK 19 1 C9J3R1;C9IZP0;J3KR59;J3KR68;Q9UID6 C9J3R1 ZNF639 Zinc finger protein 639 1 YFDNKDDDS(0.837)DT(0.034)ET(0.051)S(0.077)NDLPK;YFDNKDDDS(0.523)DT(0.036)ET(0.22)S(0.22)NDLPK;YFDNKDDDS(1)DTETSNDLPK;YFDNKDDDS(0.989)DT(0.009)ET(0.001)SNDLPK;YFDNKDDDS(0.999)DT(0.001)ETSNDLPK 156.43 2.4328000000000004e-07 3338900000.0 4417690.0 3985080.0 3756390.0 3580410.0 4188820.0 4091790.0 3783310.0 3958650.0 4772480.0 3730580.0 True False 4172631.9292533156 3793630.7750729714 3998532.909836502 3920691.089910478 4518456.302874416 4066251.6208375692 4165763.8963474003 3944918.367105859 3905917.9364303844 3697529.9635473215 1.1284917148447373 1.0259905430038634 1.081406492782118 1.0603541089763235 1.2220201992736572 1.0997210735072733 1.1266342497332642 1.0669063958906229 1.0563586975460615 1.0 21.818130407814433 -7.916901298456967 1.5668321077751617 1.0021991402214168 1.1042149524879166 0.3106020209647885 0.04916284017246117 0.48714996023299156 2.6563600358475226 0.048683327386864816 0.01439767438147038 1.2108732958832153e-08 7.916901298456967 0.1020158122664998 YFDPANGK ddPTM_KYSE-520_SHP099_60min_R1 1 YFDPANGK 8 0 P13639 P13639 EEF2 Elongation factor 2 0 117.39 0.007457899999999999 561440000.0 835350.0 990060.0 580130.0 507410.0 824520.0 922510.0 680530.0 789100.0 735640.0 777760.0 False True 789011.4702710599 942496.0314896436 617526.1080408184 555634.0938416201 889405.0331229346 916752.2729022902 749324.6137327617 786362.7962773239 602066.319975285 770869.6514881242 1.0235342236497622 1.2226399491408224 0.8010772078635032 0.7207886479497502 1.1537683853631857 1.189244214158058 0.9720509975794599 1.0200982679228465 0.7810222114893575 1.0 19.55612740584821 -7.719541403530468 24.96547715168075 0.890510608237705 1.0123059216547665 0.08717064376619987 0.15841148878819752 339.4395107292462 202259.84323792264 0.11375478918422989 0.04299443072274215 1.907473866010423e-08 7.719541403530468 0.12179531341706151 YFDS(ph)GDYNMAK ddPTM_KYSE-520_SHP099_60min_R1 28 YFDSGDYNMAK 11 0 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;O43768-6;O43768-5;O43768-7;P56211;H3BMD8;P56211-2;H3BQ52;H3BTD3 A6NMQ3;P56211 ENSA;ARPP19 Alpha-endosulfine;cAMP-regulated phosphoprotein 19 1 YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK;YFDS(1)GDYNMAK 273.74 9.072e-21 213361680000.0 73970620.0 77012250.0 81936690.0 76679780.0 69406930.0 67856900.0 66218620.0 68850760.0 87998910.0 68094020.0 True False 69867322.2518249 73312465.91225602 87218460.14073932 83967403.23658355 74868860.51958871 67433379.91686106 72912644.34105259 68611932.78344826 72020526.21599747 67490759.95914586 1.0352131505722806 1.0862593035940655 1.2923022380179927 1.2441318380088102 1.1093201582692065 0.9991498089172571 1.0803352101115584 1.0166122418088206 1.0671168358393595 1.0 26.008186663062293 -6.0153120865305505 6.649717341292779 1.0381736855149468 1.169306527529857 0.42786695774809524 0.07189156536351739 0.1695074498258602 34.471517947632904 0.025308383036803318 0.026694061914029853 9.653569186037076e-07 6.0153120865305505 0.13113284201491027 YFFFDDGNGLK ddPTM_KYSE-520_SHP099_60min_R1 2 YFFFDDGNGLK 11 0 P61009 P61009 SPCS3 Signal peptidase complex subunit 3 0 ; 180.67 2.5413000000000002e-05 367010000.0 731730.0 784120.0 493760.0 480340.0 837910.0 805570.0 676780.0 599660.0 618060.0 579520.0 False True 691139.4782324092 746449.6982118855 525588.5596439324 525991.3691805134 903848.7499442574 800542.1388189816 745195.5271362893 597579.9194216967 505835.88402469334 574385.903659738 1.2032667825390004 1.2995613114037645 0.9150443217619199 0.9157456090567759 1.5735914551268144 1.3937356988015794 1.297377812352682 1.0403805448813706 0.8806551149701383 1.0 19.131660818009795 -7.448462054736407 4.382902239940027 0.943743496923796 1.2256599187322805 0.28268950354020117 0.18992430184792106 0.31987048139510615 11.426812420916722 0.12887698734899622 0.055849994795298716 3.560720994789719e-08 7.448462054736407 0.28191642180848453 YFFTPLDS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 YFFTPLDSPR 10 0 Q96EE3-1 Q96EE3-1 SEH1L Nucleoporin SEH1 1 YFFTPLDS(1)PR;YFFTPLDS(1)PR 105.83 0.0018112000000000002 23791000.0 81974.0 84884.0 82677.0 73090.0 75420.0 74964.0 63930.0 71120.0 73353.0 74287.0 True False 77426.73880888225 80806.04522651844 88006.49170787711 80036.4516246902 81355.1249189005 74496.12186951604 70392.66829667387 70873.30131953272 60033.94427865143 73628.87497441139 1.051581174312262 1.0974776574353657 1.1952714439608434 1.0870253233192233 1.1049350536345184 1.0117786248317124 0.9560470443306079 0.962574823317125 0.8153587067507866 1.0 16.16798403731098 -6.5609206837272085 1.4623332885877165 0.9182022632564353 1.1149097789482607 0.6878639333660503 0.05544478148695182 0.22496425287351332 0.9783293767415367 0.028801188223600612 0.020388802130457434 2.7483960536218964e-07 6.5609206837272085 0.19670751569182543 YFGGTEDR ddPTM_KYSE-520_SHP099_60min_R1 2 YFGGTEDR 8 0 Q16658 Q16658 FSCN1 Fascin 0 ; 139.68 0.0047956000000000006 380040000.0 861700.0 965400.0 697580.0 580460.0 880490.0 910290.0 635980.0 796050.0 787740.0 800930.0 False True 813899.7832436364 919020.7349050563 742547.1229674625 635626.7438783372 949779.5536971975 904608.5424550688 700271.0649666614 793288.6883494675 644706.2733094064 793834.3833141115 1.0252765568628504 1.157698323759063 0.9353929970474015 0.8007044759446086 1.19644547233145 1.1395431609783588 0.8821374831903342 0.9993125833598113 0.8121420372570373 1.0 19.5984785255154 -6.781211784667933 24.993126438515933 0.9233407291547951 1.038882947069983 0.19260118037142904 0.11933611063233573 469.1742025985001 593049.776967676 0.05250399107988041 0.03545119584417719 1.65496272041511e-07 6.781211784667933 0.11554221791518782 YFLHDDRDDGVDYWAK ddPTM_KYSE-520_SHP099_60min_R1 5 YFLHDDRDDGVDYWAK 16 1 Q9NYF8;Q9NYF8-2;H0YF14;Q9NYF8-4 Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 0 ;;;; 159.31 6.9304e-08 6995950000.0 6346510.0 7074640.0 5099260.0 4728240.0 7272770.0 7382350.0 5852110.0 6525770.0 6480890.0 5964430.0 False True 5994456.43884597 6734763.675148863 5427966.458704469 5177610.50800281 7845095.6225991985 7336274.015306318 6443698.389889705 6503133.626996167 5304123.745941805 5911589.790456327 1.0140176587562661 1.1392474636892886 0.9181906477116156 0.875840626892202 1.3270703652787825 1.2409984920046384 1.0900110830241325 1.1000651021988754 0.8972415092983591 1.0 22.495114732616276 -4.004472600620458 14.343422730548957 1.072690519380007 0.9634188500822486 0.009539788426657703 0.14042871290205103 3732247.935680399 110938759.88285574 0.03716771461687145 6295985.024546518 9.897543049075033e-05 4.004472600620458 -0.10927166929775833 YFPSS(ph)LSPVTPSESLPRPR ddPTM_KYSE-520_SHP099_60min_R1 2 YFPSSLSPVTPSESLPRPR 19 1 K7EKZ6;K7EQ21;Q9P0U4;Q9P0U4-2 K7EKZ6 CXXC1 CXXC-type zinc finger protein 1 1 Y(0.004)FPS(0.248)S(0.408)LS(0.34)PVTPSESLPRPR;Y(0.001)FPS(0.068)S(0.783)LS(0.146)PVT(0.002)PSESLPRPR 96.234 0.00029882 185267000.0 613280.0 677180.0 622740.0 570730.0 655090.0 610800.0 521470.0 661790.0 784910.0 614960.0 True False 579260.13585663 644647.2563320968 662882.8168192294 624972.0076037688 706641.8560477659 606987.7706352443 574185.2766567579 659494.4049529477 642390.1299709122 609511.9328316409 0.9503671784825137 1.057645013342439 1.0875633127306312 1.0253646794088251 1.1593568853769336 0.9958587157027919 0.9420410753719551 1.08200409118998 1.0539418432491179 1.0 19.217294940185518 -8.945973310282499 14.47482991014169 0.9999999916992935 1.041537122284974 0.0337941719434004 0.062137195263056805 0.0 0.0 0.06090382730623856 0.014771347822823456 1.1324699574297448e-09 8.945973310282499 0.04153713058568054 YFPSSLS(ph)PVTPSESLPR ddPTM_KYSE-520_SHP099_60min_R1 2 YFPSSLSPVTPSESLPR 17 0 K7EKZ6;K7EQ21;Q9P0U4;Q9P0U4-2 K7EKZ6 CXXC1 CXXC-type zinc finger protein 1 1 YFPSSLS(1)PVTPSESLPR;YFPSSLS(1)PVTPSESLPR 334.46 2.0998e-53 115120000.0 239460.0 229700.0 177042.0 166953.0 177576.0 218680.0 191123.0 247680.0 247850.0 251100.0 True False 226176.67644832446 218664.86721327103 188454.41059721578 182820.16292375012 191550.22093076972 217315.1370047726 210443.57802072883 246820.85588894674 202846.68779005305 248875.44935284386 0.9087946482325054 0.8786116420155944 0.7572237883939851 0.7345849636801914 0.7696629837489469 0.8731883260074941 0.8455778927489624 0.991744491193327 0.8150530247861716 1.0 17.925064395218488 -6.854953881228204 1.842364670079674 0.9267689659875932 0.8092798947138872 0.3343658204434129 0.0713465626143755 0.43650926812569774 3.0038119918737984 0.04120330537241161 0.023825640675961383 1.3965166526320963e-07 6.854953881228204 -0.117489071273706 YFPSSLS(ph)PVTPSESLPRPR ddPTM_KYSE-520_SHP099_60min_R1 2 YFPSSLSPVTPSESLPRPR 19 1 K7EKZ6;K7EQ21;Q9P0U4;Q9P0U4-2 K7EKZ6 CXXC1 CXXC-type zinc finger protein 1 1 YFPS(0.006)S(0.157)LS(0.837)PVTPSESLPRPR;YFPS(0.011)S(0.104)LS(0.882)PVT(0.003)PSESLPRPR 180.45 1.0534000000000001e-09 353840000.0 138891.0 129769.0 135530.0 106551.0 119858.0 125603.0 122903.0 129777.0 156910.0 116678.0 True False 131186.43935765576 123534.70245275999 144266.480655667 116677.57500427375 129290.14270126715 124819.06508693271 135327.23465768984 129326.83387717945 128419.09937921005 115644.32369411038 1.1343958368821947 1.0682297107769887 1.2475016157063168 1.008934734340238 1.1179981738079179 1.0793358558357808 1.1702021364718473 1.1183154498724948 1.1104660849493149 1.0 16.819334928657057 YFQHLLGK ddPTM_KYSE-520_SHP099_60min_R1 2 YFQHLLGK 8 0 A0A494C039;Q9Y4L1;E9PJ21;A0A087WWI4;K7EQK2;A0A087X054;Q9Y4L1-2;Q9BST8;J3QQH7;J3QLE9;J3QL06;J3KTF1 A0A494C039 HYOU1 Hypoxia up-regulated protein 1 0 ; 109.86 0.0018552 395050000.0 1687510.0 1707340.0 1274580.0 1158000.0 2142530.0 1919300.0 1292310.0 1286970.0 1404750.0 1157980.0 False True 1593900.456332217 1625316.8236304116 1356741.4662001056 1268055.971834604 2311134.9216718636 1907320.9367718145 1422949.306530183 1282505.8014510577 1149682.810865752 1147721.1980948066 1.3887523023693025 1.4161251237046104 1.1821176331431957 1.1048466944233064 2.013672767836213 1.6618329781988237 1.2398039775620153 1.1174367116160184 1.0017091370048767 1.0 20.130340797595615 -7.095064647221907 3.095910090244185 1.041507603466085 1.4548201810439418 0.3821256669997115 0.23944608760188685 0.32420821992277876 5.922135732138435 0.14010166291194384 0.07556732170510443 8.034065216203895e-08 7.095064647221907 0.4133125775778568 YFQINQDEEEEEDED ddPTM_KYSE-520_SHP099_60min_R1 5 YFQINQDEEEEEDED 15 0 P35268;K7ERI7 P35268 RPL22 60S ribosomal protein L22 0 ;;;; 231.17 1.2694e-16 1424940000.0 1684630.0 1851670.0 3099070.0 992690.0 1947430.0 1698090.0 1589890.0 1475200.0 3095350.0 2284170.0 False True 1591180.2156733512 1762712.9937866668 3298841.0108873234 1087034.9591368684 2100681.661639011 1687491.590435496 1750611.5970311123 1470082.8755142696 2533312.467423606 2263934.0308573716 0.7028385959951127 0.7786061650917946 1.4571277104033034 0.4801531070784773 0.927889961901171 0.7453801954628635 0.7732608694291946 0.6493488129411334 1.118986875454237 1.0 21.110400489180567 -4.5321673272235925 24.998727338493897 0.8756069203217416 0.7217800765069995 0.05432964956138686 0.25514237786368454 580.747272631546 1562989.5111493634 0.06348493533861711 0.16845072759387542 2.9365180371251356e-05 4.5321673272235925 -0.1538268438147421 YFQS(ph)PS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 YFQSPSR 7 0 Q16629;Q16629-4;H7BZZ6 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 2 Y(0.025)FQS(0.975)PS(1)R 88.134 0.017259 703760000.0 1468600.0 1318400.0 1168500.0 1329900.0 1361300.0 1353000.0 1334000.0 1428300.0 1487200.0 1351200.0 True False 1387133.8304184803 1255062.0850412555 1243823.3796661054 1456293.296150985 1468426.5652625188 1344555.4251301337 1468853.7385853762 1423345.5606677248 1217161.9692611112 1339229.4192176918 1.0357701305790996 0.9371524154348383 0.9287604960117157 1.0874113689958185 1.0964712574192832 1.0039769182456828 1.096790226907802 1.062809359056023 0.9088524727690899 1.0 20.352971694748373 -5.257409190762216 24.983932283930013 1.0428742737691878 0.9642201543204378 0.21144786596459464 0.06048390740997466 482.302587701288 2989883.097250212 0.01663508090382892 0.02749410526252365 5.528289901891216e-06 5.257409190762216 -0.07865411944875 YFQS(ph)PS(ph)RS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 3 YFQSPSRSR 9 1 Q16629;Q16629-4;H7BZZ6 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 3 YFQS(1)PS(1)RS(1)R;YFQS(1)PS(1)RS(1)R;Y(0.003)FQS(0.997)PS(0.999)RS(1)R 74.475 0.021634 7190060000.0 3660910.0 3384200.0 2896950.0 3298640.0 3015830.0 3367730.0 3141390.0 3358560.0 3657290.0 3144200.0 True False 3457832.024456845 3221617.9522122364 3083692.0322838826 3612141.7538277204 3253158.663274565 3346710.747873986 3458952.358211923 3346909.9392537936 2993218.328778226 3116344.834150586 1.1095793978137654 1.0337809593174705 0.9895220832082264 1.1590956540636725 1.0439020186805708 1.0739218302156188 1.1099389003125903 1.0739857484885982 0.960490089535961 1.0 21.57142345066774 -7.754272905259694 24.917003661457684 0.9802450362598244 1.0730447183913565 0.41078783993912404 0.04499985748823407 138.87320675777215 482858.80072765314 0.03170316593818545 0.011425587923991953 1.760869190346649e-08 7.754272905259694 0.09279968213153211 YFQS(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 2 YFQSPSR 7 0 Q16629;Q16629-4;H7BZZ6 Q16629 SRSF7 Serine/arginine-rich splicing factor 7 1 YFQS(0.888)PS(0.112)R;YFQS(0.998)PS(0.002)R 125.57 0.0022711 2783700000.0 3304400.0 2795690.0 2741780.0 2441040.0 2620670.0 2952090.0 2537120.0 2517540.0 3193780.0 2625740.0 True False 3121098.344841907 2661380.8559837607 2918519.5258031054 2673035.707674561 2826901.8194274013 2933664.911287815 2793596.8495050436 2508807.241338255 2613870.060641981 2602477.986394809 1.1992794410397831 1.0226333786094957 1.1214386984483609 1.0271117456703236 1.0862346710350026 1.1272583002140188 1.0734372640650036 0.9640070941824506 1.0043773950468466 1.0 21.311454529562273 -7.1657680979891305 5.093673627703703 0.9885871224412117 1.0918203522603227 0.4927841964747345 0.04876606197182164 0.18534748263299552 7.592834386838759 0.022540726205741674 0.012692754353105256 6.827031426351903e-08 7.1657680979891305 0.10323322981911098 YFSEADK ddPTM_KYSE-520_SHP099_60min_R1 2 YFSEADK 7 0 P12268;H0Y4R1 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 0 ; 110.14 0.022678999999999998 570480000.0 753020.0 744900.0 550280.0 503770.0 728760.0 802250.0 607710.0 677850.0 635490.0 710060.0 False True 711248.4794918466 709113.8858823049 585751.9292791296 551648.149336026 786109.265922805 797242.860170472 669143.2574780496 675498.6965613797 520101.0353992367 703769.4208183205 1.0106271435676044 1.007594056953725 0.8323065935403048 0.7838478527449904 1.1169983273907274 1.1328182734104355 0.9507989942217031 0.9598295643137372 0.7390219296463321 1.0 19.424743303966004 -9.535873730028873 0.00492747511921209 0.5438489210034317 1.351582427302499 0.0011927744561075482 0.12512771838745446 444217.84448781586 505.64200020200803 42438.64356715466 40455.96713152981 2.9115635244038617e-10 9.535873730028873 0.8077335062990673 YFSEADKIK ddPTM_KYSE-520_SHP099_60min_R1 1 YFSEADKIK 9 1 P12268;H0Y4R1 P12268 IMPDH2 Inosine-5-monophosphate dehydrogenase 2 0 59.757 0.041458 346840000.0 439630.0 375880.0 323440.0 230690.0 380960.0 400990.0 302110.0 394920.0 392360.0 351390.0 False True 415242.8475193225 357822.16059261723 344289.4599222977 252614.70824052233 410939.3846341063 398487.27267031197 332650.2271094662 393550.1146950213 321117.3145907007 348276.9579772834 1.1922776916709115 1.0274069311698664 0.9885507841858266 0.7253270779314642 1.1799212529613001 1.144167776658666 0.9551313099822227 1.1299918231188033 0.922017110909892 1.0 18.409875501735414 -8.817702615155701 0.004375123980345733 9.594621176072646e-08 2.0266707182755566 0.013698682533613615 0.13487348644251287 176771.49249305154 261.81616413345694 61487.25987636627 59786.02875198393 1.5215890871624181e-09 8.817702615155701 2.0266706223293447 YFTWDPSR ddPTM_KYSE-520_SHP099_60min_R1 2 YFTWDPSR 8 0 Q14697;Q14697-2;F5H6X6;E9PKU7 Q14697 GANAB Neutral alpha-glucosidase AB 0 ; 133.9 0.0056967 1804190000.0 4608700.0 4450500.0 2888400.0 2839800.0 4894400.0 4725300.0 3770300.0 3523900.0 3554600.0 3897400.0 False True 4353046.223784323 4236691.299663305 3074590.885603402 3109693.7381829936 5279561.434673376 4695807.649938958 4151438.7185820327 3511676.4133844464 2909174.2441739812 3862872.068131315 1.1268937068087093 1.096772356148162 0.7959339142936597 0.8050211561076431 1.3667450905842171 1.2156259816832555 1.0747026164369748 0.9090843163965403 0.7531117243500404 1.0 21.88124246803594 -7.333470933059146 4.511967766444052 0.865450539419124 1.0664305286018834 0.19221401056485243 0.1702574938787333 0.40519870235606437 15.764000723493607 0.10833636214042267 0.04992309904032837 4.640118448402271e-08 7.333470933059146 0.2009799891827594 YFVS(ph)NIYLSPR ddPTM_KYSE-520_SHP099_60min_R1 1 YFVSNIYLSPR 11 0 I3L0U2;I3L3C7;Q9Y6M0-3;Q9Y6M0-2;Q9Y6M0 I3L0U2 PRSS21 Testisin 1 Y(0.295)FVS(0.41)NIY(0.295)LSPR 57.858999999999995 0.048431 64210000.0 65378.0 89228.0 63184.0 55430.0 70353.0 78939.0 66744.0 88633.0 76576.0 75166.0 True False 61751.3520121881 84941.35294604141 67256.94173797438 60698.05053436281 75889.38084618667 78446.31242006476 73491.13487866742 88325.55281009765 62671.72872386959 74500.08771826305 0.8288762322765735 1.1401510460935844 0.9027766784962714 0.814737974053193 1.0186482079481236 1.0529693967170233 0.986457024810344 1.1855764941394211 0.8412302675518348 1.0 16.184954503790404 -5.9537197236274375 24.99994417265329 1.0245754562703502 0.9334961216366126 0.12867299747152938 0.11449835676479653 263.74924027700354 142472.3495633168 0.034659094348427726 0.03929970816081283 1.112449426250809e-06 5.9537197236274375 -0.09107933463373763 YGDFFIR ddPTM_KYSE-520_SHP099_60min_R1 1 YGDFFIR 7 0 B0QY89;Q9Y262-2;Q9Y262;B0QY90;H0Y7E6 B0QY89 EIF3L Eukaryotic translation initiation factor 3 subunit L 0 89.369 0.057645 377120000.0 331620.0 293570.0 213400.0 230380.0 323680.0 308340.0 246530.0 282740.0 284910.0 251130.0 False True 313224.3775319193 279466.4565424461 227156.10545207252 252275.24593372748 349151.7745127247 306415.53568708437 271451.6583009386 281759.2409320123 233177.52599662697 248905.1835761833 1.2584084149298143 1.122782790326698 0.9126210317855675 1.0135395426849867 1.4027501135019897 1.2310532520239728 1.0905825841021684 1.131994267390471 0.9368126555116819 1.0 17.925236749921623 -7.751635096879224 21.703879057602133 0.9684064109151254 1.1421509956936424 0.23424362015148203 0.12794144103318353 58.20362325658307 128859.40566571032 0.09771072852006585 0.03561527560426025 1.771596865124513e-08 7.751635096879224 0.17374458477851706 YGEQGLR ddPTM_KYSE-520_SHP099_60min_R1 1 YGEQGLR 7 0 O60884 O60884 DNAJA2 DnaJ homolog subfamily A member 2 0 103.75 0.057549 0.0 267410.0 339310.0 244200.0 207190.0 310120.0 281360.0 217370.0 269250.0 253100.0 247010.0 False True 252576.23423138092 323009.0382853068 259941.52273381464 226881.27530605518 334524.6796585705 279603.92787480704 239343.8809267639 268316.0345934224 207143.42013178303 244821.68357087194 1.0316742804289398 1.319364500619492 1.061758578498484 0.9267205093799491 1.3664013529329848 1.1420717470634751 0.9776253370852982 1.0959651558631212 0.846099157192579 1.0 17.901371815942806 -6.757991683868935 23.11956907031505 0.987919473441746 1.1462826859531217 0.2576945577006713 0.1337733225330237 51.102976449330946 342694.9915596746 0.05262290560828198 0.03901691089370902 1.7458555832896415e-07 6.757991683868935 0.15836321251137564 YGEYEWVHKPR ddPTM_KYSE-520_SHP099_60min_R1 1 YGEYEWVHKPR 11 1 Q9H9Y2 Q9H9Y2 RPF1 Ribosome production factor 1 0 164.64 1.7457e-05 483210000.0 701050.0 530040.0 441370.0 366210.0 634370.0 543460.0 456430.0 452120.0 427860.0 397250.0 False True 662161.3589914724 504576.0827937403 469821.4164169688 401014.48829494906 684291.3099284399 540068.0645537493 502570.3987275287 450551.70124560123 350171.4094728748 393730.67405582295 1.6817621857361091 1.2815259669664492 1.1932558151422 1.0184994838326806 1.737967994414937 1.3716687577081654 1.2764319161383766 1.1443144538485264 0.8893678662771081 1.0 18.58684958618287 -7.408287270077436 2.083966620886617 0.9471830561610692 1.3636176249862457 0.4157777274059776 0.20232267365669832 0.3636652598984736 2.898093985732115 0.16600319396574162 0.059672054022339556 3.905824541733811e-08 7.408287270077436 0.4164345688251765 YGGDEIPFS(ph)PYR ddPTM_KYSE-520_SHP099_60min_R1 7 YGGDEIPFSPYR 12 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 1 YGGDEIPFS(0.999)PY(0.001)R;YGGDEIPFS(0.997)PY(0.003)R;YGGDEIPFS(1)PYR;YGGDEIPFS(1)PYR;YGGDEIPFS(1)PYR;YGGDEIPFS(1)PYR;YGGDEIPFS(1)PYR 206.45 6.2551e-09 3669160000.0 4934210.0 4597740.0 4136690.0 4084690.0 4419700.0 4376600.0 4033850.0 4439290.0 5221930.0 4572120.0 True False 4660499.5351962205 4376857.669051566 4403347.656338015 4472897.70949317 4767505.245346913 4349284.015982661 4441630.924582164 4423891.139128074 4273759.146142869 4531614.573855536 1.0284412893550716 0.9658494997132332 0.9716950955499309 0.9870428379542416 1.052054442770202 0.9597647692888969 0.9801431371077939 0.9762284649385329 0.9430985527321046 1.0 22.11159373056348 YGGS(ph)PRDPVLTLR ddPTM_KYSE-520_SHP099_60min_R1 2 YGGSPRDPVLTLR 13 1 Q86XL3;Q86XL3-2 Q86XL3 ANKLE2 Ankyrin repeat and LEM domain-containing protein 2 1 YGGS(1)PRDPVLTLR;YGGS(1)PRDPVLTLR 130.29 2.5506999999999998e-05 433150000.0 669020.0 549460.0 442540.0 487320.0 676680.0 585930.0 478500.0 493630.0 608350.0 525450.0 True False 631908.126941694 523063.11684372625 471066.8364890353 533634.746281899 729930.8662174701 582272.9935303015 526871.4497099712 491917.7127441079 497888.97525551217 520794.9217939135 1.2133530887072466 1.0043552556964261 0.9045150341835392 1.0246542812740145 1.4015706291896504 1.1180466036892651 1.0116677941004621 0.9445516693013516 0.9560173389181671 1.0 18.990355855470206 -6.908820425052356 4.0773453649185765 0.9649875816984637 1.1056391181924259 0.2158483389620951 0.1258907155196318 0.4049155060545669 12.584239912436539 0.061919633199474584 0.0402615265052659 1.2336148109780018e-07 6.908820425052356 0.14065153649396223 YGGSVGSQPPPVAPEPGPVPSS(ph)PSQEPPTKR ddPTM_KYSE-520_SHP099_60min_R1 8 YGGSVGSQPPPVAPEPGPVPSSPSQEPPTKR 31 1 E9PS08;A0A087WTZ5;E9PJ81;E9PRQ7;Q04323;Q04323-2 E9PS08 UBXN1 UBX domain-containing protein 1 1 YGGSVGSQPPPVAPEPGPVPS(0.351)S(0.606)PS(0.043)QEPPTKR;YGGSVGSQPPPVAPEPGPVPS(0.354)S(0.601)PS(0.044)QEPPTKR;YGGSVGSQPPPVAPEPGPVPS(0.399)S(0.515)PS(0.066)QEPPT(0.02)KR;YGGSVGSQPPPVAPEPGPVPS(0.357)S(0.567)PS(0.075)QEPPT(0.001)KR;YGGSVGSQPPPVAPEPGPVPS(0.383)S(0.538)PS(0.075)QEPPT(0.004)KR;YGGSVGSQPPPVAPEPGPVPS(0.075)S(0.803)PS(0.121)QEPPTKR;YGGSVGSQPPPVAPEPGPVPS(0.171)S(0.726)PS(0.098)QEPPT(0.005)KR;YGGSVGSQPPPVAPEPGPVPS(0.022)S(0.845)PS(0.133)QEPPTKR 234.28 4.3673e-31 19219180000.0 6911810.0 7894130.0 5634530.0 5208930.0 5343120.0 8268610.0 5946050.0 7807870.0 9480980.0 8541000.0 True False 6528398.120948368 7514884.1454693 5997740.81936675 5703985.141078092 5763593.145805823 8217002.537904864 6547134.761855751 7780786.321340564 7759473.028056217 8465333.384797443 0.7711920870916271 0.8877245353343063 0.7085061564306322 0.6738051393606841 0.6808465637226327 0.9706649655005264 0.7734054247188293 0.9191352505163908 0.9166175359367592 1.0 23.01313545529777 -6.260757547761118 24.999997731358444 0.902000638624025 0.7464588480147746 0.5355012543695155 0.07934375966815517 58.80309763883747 2156088.192117065 0.028374354421004968 0.026772169601428638 5.485831352628731e-07 6.260757547761118 -0.15554179060925044 YGIDKDKVDK ddPTM_KYSE-520_SHP099_60min_R1 2 YGIDKDKVDK 10 2 Q14247-3;Q14247;Q14247-2 Q14247-3 CTTN Src substrate cortactin 0 ; 159.94 0.00085357 4480500000.0 8173800.0 7119700.0 4938890.0 4552120.0 6373200.0 7165700.0 4595900.0 5498100.0 6083800.0 5011960.0 False True 7720383.019933673 6777658.925112418 5257258.751903407 4984752.116155216 6874734.5814523455 7120976.208318544 5060498.423661563 5479028.37436619 4979135.2801175 4967557.933645872 1.5541606405116248 1.3643844753589107 1.0583185585608084 1.003461294813068 1.3839264027277738 1.433496358459618 1.018709492925325 1.1029621491187986 1.00233059113276 1.0 22.24410536218336 -4.54506771219272 3.7071280275446066 1.1418577590845729 1.5287761383392091 0.4565047505575911 0.15112965869466985 0.21431505414339241 6.177199917649483 0.04236821424746504 0.15521660792704914 2.8505737910995456e-05 4.54506771219272 0.38691837925463624 YGINTTDIFQTVDLWEGK ddPTM_KYSE-520_SHP099_60min_R1 1 YGINTTDIFQTVDLWEGK 18 0 X6RJP6;P37802;P37802-2 X6RJP6 TAGLN2 Transgelin-2 0 225.67 1.1172e-14 0.0 25041.0 37225.0 28896.0 34964.0 36448.0 34170.0 27456.0 29761.0 35984.0 27931.0 False True 23651.92581200409 35436.65512413584 30758.682395234686 38286.968047690076 39316.250239247966 33956.73235528208 30231.520424737653 29657.766037269626 29450.212682821308 27683.553069989193 0.854367419969814 1.2800616681877992 1.1110814539402147 1.3830221847207786 1.4202024624458118 1.2266031123040138 1.0920390293943383 1.0713135688287285 1.0638162163782108 1.0 14.756741498372678 -6.830351552192293 4.020988732488765 1.0565900527640704 1.2286006489287054 0.20767512967788293 0.14854288316980244 0.36464122715216 11.564035708178286 0.06701515398028489 0.04487724325576478 1.4779115656963727e-07 6.830351552192293 0.172010596164635 YGLKS(ph)ELFSGLPQK ddPTM_KYSE-520_SHP099_60min_R1 1 YGLKSELFSGLPQK 14 1 H0Y450;Q5T160 H0Y450 RARS2 Probable arginine--tRNA ligase, mitochondrial 1 YGLKS(0.5)ELFS(0.5)GLPQK 50.653 0.052916 940330000.0 1298200.0 1467000.0 1420100.0 984860.0 1052200.0 808170.0 624880.0 781350.0 1549500.0 757540.0 True False 1226186.2581024603 1396523.1179881068 1511641.9182403393 1078460.7982910443 1135002.1538009413 803125.9112545595 688048.9686411016 778639.6792184602 1268149.8597163067 750828.7849572024 1.633110347750391 1.8599754644032584 2.0132977697791694 1.4363604857697578 1.5116657439627026 1.069652532434992 0.916385975639334 1.0370402611333596 1.6890000558364207 1.0 19.518124435099683 -5.768617465254952 1.6391184347918397 1.1394678063524686 1.8249679462620778 0.5979706855310872 0.23480217146855215 0.25340119399870176 1.411239574136284 0.08666206986676245 0.11586701952137182 1.7036584621090178e-06 5.768617465254952 0.6855001399096092 YGLLANTEDPTEMAS(ph)LDS(ph)DEETVFESR ddPTM_KYSE-520_SHP099_60min_R1 2 YGLLANTEDPTEMASLDSDEETVFESR 27 0 Q9BVV8 Q9BVV8 C19orf24 Uncharacterized membrane protein C19orf24 2 YGLLANTEDPTEMAS(1)LDS(1)DEETVFESR;YGLLANTEDPTEMAS(0.994)LDS(0.77)DEET(0.235)VFESR 138.84 1.5386000000000002e-06 43929000.0 79380.0 80247.0 66912.0 81699.0 76182.0 76435.0 74879.0 78023.0 97682.0 67285.0 True False 74976.63315989323 76391.81366679726 71225.2545829853 89463.64839629993 82177.08998371348 75957.94081287638 82448.50006861635 77752.356423705 79945.41116283216 66688.9072469379 1.1242744296629013 1.1454950578801826 1.0680225171369215 1.3415071874701885 1.2322452620107482 1.138989135503702 1.2363150555657376 1.165896393170771 1.1987812435853482 1.0 16.02515918907426 -9.880937364169586 13.753249323357863 0.9999999999999647 1.1847955721969927 0.37281397688024076 0.07138526018260552 0.0 0.0 0.07103294436650733 0.017228019431743177 1.3154145332910968e-10 9.880937364169586 0.18479557219702802 YGLQDS(ph)DEEEEEHPSK ddPTM_KYSE-520_SHP099_60min_R1 1 YGLQDSDEEEEEHPSK 16 0 P52948-2;P52948-5;P52948;A0A3B3ITD8;P52948-6;P52948-4;P52948-3 P52948-2 NUP98 Nuclear pore complex protein Nup98-Nup96;Nuclear pore complex protein Nup98;Nuclear pore complex protein Nup96 1 YGLQDS(1)DEEEEEHPSK 133.09 2.6356e-05 555690000.0 450230.0 628990.0 539620.0 1178500.0 593180.0 572920.0 516800.0 476800.0 663760.0 544810.0 True False 425254.8443887467 598772.3762667625 574404.7686225267 1290504.285671055 639859.8912674797 569344.1937661159 569043.1874819509 475146.09208595636 543237.9160279427 539983.4072557666 0.7875331698614992 1.1088718064685832 1.0637452205090743 2.389896186309665 1.1849621352613267 1.0543734976220158 1.0538160614487548 0.8799272083204964 1.006027053291722 1.0 19.042555550902534 -6.1683993020009185 4.502642558858755 0.9946547722658579 1.3511353860573296 0.1336945549970152 0.396370301872046 0.48522246753065784 16.97292195705223 0.14242703920925404 0.14202688228509117 6.785794415639565e-07 6.1683993020009185 0.3564806137914718 YGMGTS(ph)VER ddPTM_KYSE-520_SHP099_60min_R1 3 YGMGTSVER 9 0 P08559-3;P08559;P08559-2;P08559-4 P08559-3 PDHA1 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial 1 YGMGT(0.048)S(0.952)VER;YGMGT(0.024)S(0.976)VER;YGMGT(0.005)S(0.995)VER 101.38 0.0022918 1158860000.0 2153490.0 3347570.0 2667050.0 3069600.0 2865140.0 2839300.0 2807290.0 2634030.0 3615690.0 2763610.0 True False 2034031.6168241168 3186747.712394989 2838972.310430882 3361333.861091105 3090610.2175833792 2821578.8755151397 3091078.269710145 2624893.164717224 2959171.8401275617 2739126.5654560435 0.7425840202040704 1.163417474965937 1.0364516726733344 1.2271553653204297 1.1283196098201531 1.030101679527674 1.1284904862347989 0.9582956836754272 1.0803341026466524 1.0 21.38528449879834 -4.25346058070834 24.78479301286172 1.0864535233294295 0.7425838294185622 0.639946347313703 0.07671515560967773 559.3494150961186 1737480.2324270955 0.019009867044287445 0.20192066681714016 5.5787823637172624e-05 4.25346058070834 -0.3438696939108673 YGNPWEK ddPTM_KYSE-520_SHP099_60min_R1 2 YGNPWEK 7 0 E9PK47;P06737-2;P06737;P11216 E9PK47;P11216 PYGL;PYGB Alpha-1,4 glucan phosphorylase;Glycogen phosphorylase, liver form;Glycogen phosphorylase, brain form 0 ; 143.11 0.017044999999999998 370370000.0 1279640.0 1177460.0 760980.0 754620.0 1249590.0 1228240.0 902750.0 990300.0 971790.0 996150.0 False True 1208655.8183009014 1120893.054196507 810033.9884110497 826338.8579152239 1347925.6238054722 1220574.0985675063 994008.7799909635 986864.8804377578 795337.4328323399 987324.8859929721 1.2241723423038533 1.135282894312142 0.8204330711226655 0.836947259851714 1.3652300705961005 1.2362436274863577 1.0067697007264933 0.9995340889693552 0.8055478435879324 1.0 19.91316536589266 -7.306832776998041 2.569775500658907 0.9092173967715313 1.0905492918586432 0.16663861741675134 0.1673206475693368 0.6072957683983771 7.729371375113853 0.12325888982495865 0.051671958442966195 4.93363734720348e-08 7.306832776998041 0.1813318950871119 YGPADVEDTTGSGATDS(ph)KDDDDIDLFGS(ph)DDEEESEEAKR ddPTM_KYSE-520_SHP099_60min_R1 1 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR 39 2 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 2 YGPADVEDT(0.006)T(0.007)GS(0.008)GAT(0.323)DS(0.656)KDDDDIDLFGS(1)DDEEESEEAKR 127.62 1.725e-05 986870000.0 97918.0 74231.0 84220.0 77331.0 77790.0 77329.0 66573.0 73153.0 101230.0 78702.0 True False 92486.29334530626 70664.8313369975 89648.95595676452 84680.51498958703 83911.63043544505 76846.36102726398 73302.84852986809 72899.2493170386 82849.18380063376 78004.76150922943 1.185649331603474 0.9059040752100308 1.1492754316819156 1.0855813587683072 1.0757244661983452 0.9851496183110772 0.9397227439916599 0.9345487109580259 1.0621041869454488 1.0 16.25127457014087 -6.278597870817453 5.582522145117201 0.9768351563558249 1.0751009747612748 0.28333213508790167 0.07580413954106428 0.2335929321771901 25.742203067926948 0.02558764962843323 0.023409792760956456 5.265045506244298e-07 6.278597870817453 0.0982658184054499 YGPADVEDTTGSGATDSKDDDDIDLFGS(ph)DDEEESEEAK ddPTM_KYSE-520_SHP099_60min_R1 5 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAK 38 1 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 YGPADVEDTTGSGATDSKDDDDIDLFGS(0.998)DDEEES(0.002)EEAK;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAK;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAK;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAK;YGPADVEDTTGSGATDSKDDDDIDLFGS(0.984)DDEEES(0.016)EEAK 330.32 1.5079999999999998e-69 2170730000.0 1142430.0 1198130.0 1257000.0 980970.0 1075640.0 1142480.0 1033690.0 1073730.0 1249420.0 1148590.0 True False 1079057.130522256 1140570.0363702052 1338028.231271109 1074201.0938606162 1160286.7484455863 1135349.3585385613 1138185.473042216 1070005.481240467 1022556.8233151027 1138414.386189498 0.9478597104996866 1.001893554936461 1.1753437478506914 0.9435940962202555 1.0192130058451734 0.9973076344711383 0.9997989193126342 0.9399086081668298 0.8982290066957132 1.0 20.11859436781307 -7.133385568452141 2.555820148949804 0.9383406285604527 1.0178496454798922 0.17979029325537355 0.06429722768503905 0.47480083280347657 5.972620922246911 0.037908974927292595 0.018883038545338505 7.355537798154203e-08 7.133385568452141 0.07950901691943946 YGPADVEDTTGSGATDSKDDDDIDLFGS(ph)DDEEESEEAKR ddPTM_KYSE-520_SHP099_60min_R1 52 YGPADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKR 39 2 P24534;C9JZW3 P24534 EEF1B2 Elongation factor 1-beta 1 YGPADVEDTT(0.001)GS(0.001)GAT(0.032)DS(0.032)KDDDDIDLFGS(0.829)DDEEES(0.104)EEAKR;YGPADVEDT(0.003)T(0.003)GS(0.009)GAT(0.01)DS(0.029)KDDDDIDLFGS(0.943)DDEEES(0.002)EEAKR;YGPADVEDT(0.002)T(0.002)GS(0.002)GAT(0.001)DS(0.002)KDDDDIDLFGS(0.991)DDEEES(0.001)EEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(0.999)DDEEES(0.001)EEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(0.97)DDEEES(0.03)EEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(0.988)DDEEES(0.012)EEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(0.921)DDEEES(0.079)EEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(0.999)DDEEES(0.001)EEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(0.999)DDEEES(0.001)EEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(0.997)DDEEES(0.003)EEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDS(0.002)KDDDDIDLFGS(0.987)DDEEES(0.009)EEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(0.997)DDEEES(0.003)EEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(0.993)DDEEES(0.007)EEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR;YGPADVEDTTGSGATDSKDDDDIDLFGS(1)DDEEESEEAKR 386.02 7.6996e-115 400564439000.0 63888048.4 60462773.4 57328388.400000006 55151318.699999996 57219381.9 55744726.7 57049333.7 60507294.99999999 73404769.1 55674975.3 True False 60344050.997585006 57558051.00939082 61023868.04492862 60392883.44739941 61722221.72178169 55396803.1832089 62816437.09823805 60297409.316153854 60076313.41508419 55181738.33331729 1.0935511062207848 1.0430633892270622 1.105870708101343 1.0944360448125965 1.1185262296188925 1.003897391716668 1.1383555320204752 1.0927058685961666 1.0886991825484353 1.0 25.717687569350606 -10.27510022529989 10.097016507869295 0.9999999997149935 1.0862991624317773 0.34232181606357204 0.03599511675180991 3.2106597854538334e-09 2.475217451167794e-10 0.033544111092889586 0.008135641586510705 5.3076194229804945e-11 10.27510022529989 0.08629916271678373 YGQFSGLNPGGRPIT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 1 YGQFSGLNPGGRPITPPR 18 1 P62136-3;P62136;P62136-2 P62136-3 PPP1CA Serine/threonine-protein phosphatase PP1-alpha catalytic subunit 1 YGQFSGLNPGGRPIT(1)PPR 65.207 0.056236 1409900000.0 516120.0 701630.0 579850.0 521350.0 593460.0 647880.0 534400.0 568720.0 724230.0 634460.0 True False 487489.7947402875 667922.6416318986 617228.0587928033 570898.9472504075 640161.925674498 643836.3406011165 588422.3672413975 566747.2430602465 592728.0883525925 628839.1780024106 0.7752217288510271 1.062151763116353 0.9815356300692151 0.9078616078978131 1.0180057923681785 1.0238489634922976 0.9357279059975202 0.9012594362529904 0.942575000233717 1.0 19.26233157776653 -4.243620310152376 24.368443407894592 0.9714730486103224 0.7752214965106924 0.5871072708048621 0.050135206404615884 2064.5610312284016 2823327.3232909306 0.013136617943687616 0.3887504204695384 5.706629667277229e-05 4.243620310152376 -0.19625155209962997 YGRPPDSHHSR ddPTM_KYSE-520_SHP099_60min_R1 3 YGRPPDSHHSR 11 1 Q01130-2;Q01130;J3QL05;J3KP15 Q01130-2 SRSF2 Serine/arginine-rich splicing factor 2 0 ;; 99.5 0.0016734000000000002 347310000.0 235354.0 580950.0 1276300.0 143006.0 155791.0 550450.0 123234.0 156864.0 136013.0 218481.0 False True 222298.44445343275 553040.2899762716 1358572.340152201 156597.24724367823 168050.86537046437 547014.4373709393 135691.6953679385 156319.8753963328 111316.46780870888 216545.4283156458 1.0265672481868382 2.553922723180914 6.27384448020712 0.7231611789809547 0.7760536284585343 2.5260955247394454 0.6266199957366383 0.7218802844845762 0.5140559589484811 1.0 17.724310189137523 YGS(ph)FEEAEASYPILNR ddPTM_KYSE-520_SHP099_60min_R1 7 YGSFEEAEASYPILNR 16 0 O95425-2;O95425-3;A0A6I8PIX7;O95425-4;O95425 O95425-2 SVIL Supervillin 1 YGS(1)FEEAEASYPILNR;Y(0.005)GS(0.995)FEEAEASYPILNR;YGS(1)FEEAEASYPILNR;YGS(1)FEEAEASYPILNR;YGS(1)FEEAEASYPILNR;YGS(1)FEEAEASYPILNR;YGS(1)FEEAEASYPILNR 281.07 4.386999999999999e-31 1720512000.0 1440740.0 1392150.0 1155790.0 1209170.0 1171140.0 1250590.0 1136730.0 1225520.0 1405430.0 1186335.0 True False 1360819.2801560154 1325269.0243402473 1230294.072729384 1324089.1532497823 1263302.055124916 1242784.6039271948 1251641.7618157072 1221268.957158517 1150239.3400071585 1175824.994854663 1.1573314788432598 1.1270971701907528 1.0463241367661635 1.126093729121182 1.0743963265392784 1.0569469175817345 1.0644796353988166 1.0386485765336797 0.978240252623081 1.0 20.16524192044797 -4.042683226801997 0.19462748261590845 0.9748250213779645 1.3048569194084918 0.7308765549157278 0.027948334358822043 9.11202350745902 0.3051976917064206 0.06716331480136847 0.7492820131904937 9.063934807533896e-05 4.042683226801997 0.33003189803052735 YGS(ph)PPQR ddPTM_KYSE-520_SHP099_60min_R1 2 YGSPPQR 7 0 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 YGS(1)PPQR;YGS(1)PPQR 85.73100000000001 0.019596000000000002 534100000.0 452650.0 358550.0 464210.0 387060.0 440510.0 451960.0 361870.0 498470.0 502050.0 473490.0 True False 427540.60216459545 341324.71980547754 494133.7193622611 423846.06602616754 475175.6308409553 449139.14999395097 398451.35111086187 496740.92391377216 410890.37565057905 469295.24696964567 0.9110269173304648 0.7273133960113486 1.0529271765546393 0.9031543974993256 1.0125302438268462 0.9570502852823515 0.8490419489303584 1.0584827507232386 0.8755477032929672 1.0 18.840136323236727 -4.761408668910387 24.9999999999943 0.9609451090847801 0.81917017181416 0.3487790346262778 0.07887075418558445 0.7950500077122884 643859.6728729447 0.01882873552891204 0.04377362802092265 1.732173264339796e-05 4.761408668910387 -0.14177493727062018 YGS(ph)PPQRDPNWNGER ddPTM_KYSE-520_SHP099_60min_R1 6 YGSPPQRDPNWNGER 15 1 O15234;J3KSY7 O15234 CASC3 Protein CASC3 1 YGS(1)PPQRDPNWNGER;YGS(1)PPQRDPNWNGER;Y(0.002)GS(0.998)PPQRDPNWNGER;YGS(1)PPQRDPNWNGER;YGS(1)PPQRDPNWNGER;Y(0.013)GS(0.987)PPQRDPNWNGER 128.74 9.049600000000001e-05 10750950000.0 3734050.0 3386760.0 3284720.0 3266090.0 3071020.0 3224640.0 3010650.0 2980360.0 3889400.0 3091230.0 True False 3526914.8028558665 3224054.9659696 3496458.3069378263 3576498.2116142376 3312691.802286417 3204513.8256405266 3314995.883112489 2970021.8267812524 3183183.0037951637 3063844.107140548 1.151140423442594 1.0522907998013564 1.1411998080414842 1.1673238214956518 1.081220743106971 1.0459128185315094 1.0819727659728542 0.9693775932852997 1.038950707830234 1.0 21.54691146202539 -6.602809693910368 1.094891743813352 1.00547871209303 1.122243448178808 0.6089180001120683 0.03864673767955853 0.35458442201337426 0.8653122762523765 0.025015391337042524 0.01641681997668884 2.49568808782251e-07 6.602809693910368 0.11676473608577798 YGSIIDRDDRDER ddPTM_KYSE-520_SHP099_60min_R1 2 YGSIIDRDDRDER 13 2 P52756;C9JR02;C9J9P7;C9JFQ5;F8W910;P52756-3;P52756-4;P52756-2;P52756-5;F8WE23 P52756 RBM5 RNA-binding protein 5 0 ; 114.56 8.988799999999999e-05 954240000.0 705790.0 785210.0 471100.0 417650.0 633360.0 724000.0 506880.0 580260.0 635310.0 534290.0 False True 666638.421742516 747487.3329757618 501467.8597866515 457343.3304289493 683201.8286745538 719481.2474458362 558120.3770720793 578247.2134937025 519953.7188618061 529556.6062713296 1.2588614962929 1.4115343366951991 0.9469579906056611 0.8636344538295114 1.2901393743060978 1.3586484219539596 1.053939032130806 1.0919459915063834 0.9818661738975583 1.0 19.014425381925445 -4.752426285281954 24.99785470722063 1.086417909517763 1.3351979623058279 0.3341442783292843 0.1469124209615476 247.62391926367965 686771.554970483 0.0407865825459608 0.10460340688749623 1.7683723459009547e-05 4.752426285281954 0.2487800527880648 YGTELNQGDMKPPSYDS(ph)DEGNETEVQPQQNSQLMWK ddPTM_KYSE-520_SHP099_60min_R1 1 YGTELNQGDMKPPSYDSDEGNETEVQPQQNSQLMWK 36 1 O43815-2;O43815 O43815-2 STRN Striatin 1 Y(0.001)GT(0.001)ELNQGDMKPPS(0.152)Y(0.1)DS(0.712)DEGNET(0.033)EVQPQQNSQLMWK 126.04 4.0185e-05 592800000.0 452450.0 364460.0 297440.0 341780.0 316370.0 367240.0 305470.0 280700.0 448180.0 357330.0 True False 427351.6965632857 346950.7945343867 316613.4583208266 374262.6684400964 341266.51910093485 364947.91893923865 336349.88869990554 279726.31721587275 366801.8096983893 354164.3341985332 1.2066480311473882 0.9796322244574102 0.893973299251932 1.0567486115931048 0.963582399885675 1.0304479692036423 0.9497000579153703 0.7898206854986903 1.0356825187619596 1.0 18.434059408532068 -4.266592156332439 4.864690899413382 0.9610135897253644 1.2188983885199145 0.48519217081455424 0.0741956989689545 0.14208710728893822 9.991968916114276 0.018593375361469395 0.12340992875841553 5.412623810108582e-05 4.266592156332439 0.25788479879455006 YGVIILDEAHER ddPTM_KYSE-520_SHP099_60min_R1 2 YGVIILDEAHER 12 0 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 0 ; 151.1 2.0986e-05 0.0 388780.0 320310.0 194348.0 218394.0 324160.0 291610.0 209557.0 226059.0 241544.0 234541.0 False True 367213.59838628466 304921.8268048882 206875.9830477945 239150.1000974494 349669.5477818979 289789.9538227626 230741.0666392318 225274.85409156742 197685.6984287291 232463.14921013708 1.5796636999627789 1.3116996299884567 0.889930226578782 1.0287656383819683 1.5041934559090528 1.2466059881207427 0.9925920190931055 0.9690777005172905 0.8503958545706073 1.0 17.82664250822538 -6.810856164454406 4.380994770375452 0.942454492978346 1.2471252090103466 0.3809399776191513 0.19208896279670748 0.2634679712880443 10.587003987727805 0.0896655297546649 0.06083950527120921 1.545766302651299e-07 6.810856164454406 0.3046707160320006 YGVQADRVDK ddPTM_KYSE-520_SHP099_60min_R1 3 YGVQADRVDK 10 1 Q14247-3;Q14247;Q14247-2 Q14247-3 CTTN Src substrate cortactin 0 ;; 118.28 0.00060443 2717260000.0 2266780.0 2527100.0 1657990.0 1679160.0 2135950.0 2286250.0 1734990.0 1834700.0 1866390.0 1771560.0 False True 2141037.1946861 2405694.322745569 1764866.6882777961 1838746.8615421378 2304037.113106937 2271980.665708623 1910379.7210706426 1828335.853922201 1527500.62386313 1755865.3566528237 1.219362969133079 1.3700904306987998 1.0051264361420806 1.0472026539935326 1.312194642019183 1.2939378620919209 1.0879989822866412 1.0412733795303797 0.8699417743368311 1.0 20.743750789632077 -7.2306182210240655 2.2251932433013164 0.9461317101679452 1.201848112976643 0.4713634077275697 0.11311451623747877 0.31115416160558496 2.9355976972198388 0.08082234165878187 0.035066512771743656 5.880060289011539e-08 7.2306182210240655 0.2557164028086978 YGVYEDENYEVGS(ph)DDEEIPFK ddPTM_KYSE-520_SHP099_60min_R1 4 YGVYEDENYEVGSDDEEIPFK 21 0 O15541 O15541 RNF113A RING finger protein 113A 1 YGVYEDENYEVGS(1)DDEEIPFK;YGVYEDENYEVGS(1)DDEEIPFK;YGVYEDENYEVGS(1)DDEEIPFK;Y(0.001)GVY(0.001)EDENY(0.006)EVGS(0.992)DDEEIPFK 138.25 1.2684e-06 732562000.0 959784.0 994607.0 871368.0 812754.0 835481.0 884338.0 880070.0 883934.0 1110214.0 842493.0 True False 906542.8682380314 946824.5867844572 927537.7755180942 889997.8957966003 901228.6014633767 878818.5185134739 969036.0642554959 880867.8392657456 908627.1238174137 835029.1674696349 1.0856421590458958 1.133882053070784 1.1107848823158901 1.0658285129051666 1.0792779900064378 1.0524405047748604 1.1604816957375732 1.0548946953973048 1.0881381863232402 1.0 19.67146706607005 -13.999999999681288 0.22742221363492482 0.5065746429295728 1.103463655943132 0.4322171308103907 0.032250996867515015 153.9656835853484 1.5417801391639738 34.87970863301151 0.057799331192432385 1.0000000007338618e-14 13.999999999681288 0.5968890130135591 YGYLS(ph)LPKPMK ddPTM_KYSE-520_SHP099_60min_R1 4 YGYLSLPKPMK 11 1 Q9UBT7-3;Q9UBT7-2;Q9UBT7 Q9UBT7-3 CTNNAL1 Alpha-catulin 1 YGYLS(1)LPKPMK;YGYLS(1)LPKPMK;Y(0.002)GY(0.002)LS(0.996)LPKPMK;Y(0.003)GY(0.003)LS(0.994)LPKPMK 119.87 0.00015138 12329260000.0 14830190.0 13458400.0 13916310.0 13800300.0 13933680.0 14573480.0 13127290.0 12899480.0 16099120.0 12434790.0 True False 14007529.797449168 12811838.262529759 14813377.609483264 15111876.362788493 15030181.344205571 14482521.505562069 14454324.5832042 12854734.714641275 13175925.633788956 12324627.43472023 1.1365479298780232 1.0395314852631559 1.2019330959856742 1.2261527938942955 1.2195241944485407 1.1750879758655215 1.1728001239602839 1.0430120328365997 1.0690729357603541 1.0 23.555040699763563 -7.2630315907769205 23.47073639919191 1.0420318388826268 1.168344710148856 0.5651266496941574 0.05220857788369761 51.72067639919799 762377.8088059827 0.02975750511350948 0.015501310901978106 5.457181638615801e-08 7.2630315907769205 0.12631287126622914 YGYS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 3 YGYSPR 6 0 Q8IX90-3;Q8IX90 Q8IX90-3 SKA3 Spindle and kinetochore-associated protein 3 1 YGYS(0.999)PR;YGY(0.001)S(0.999)PR;YGY(0.001)S(0.999)PR 84.568 0.017747 2147420000.0 2696670.0 2680330.0 2428570.0 2197550.0 2355690.0 2541850.0 2192010.0 2429350.0 2790230.0 2452610.0 True False 2547080.3394216322 2551562.9235426458 2585119.508049387 2406404.491282498 2541069.400957365 2525985.37129862 2413599.762756019 2420923.151864555 2283594.5679743392 2430881.7835017056 1.0478009900393188 1.0496450057176774 1.0634492905391313 0.9899306941269896 1.0453282501039327 1.0391230821845712 0.9928906371083205 0.9959032842712717 0.9394099636901314 1.0 21.2130483045243 -6.942871115445217 1.8382740506793558 0.9737483522010368 1.039676616008388 0.5844477861603725 0.02370980443680612 0.2549828456207652 1.7180352774427752 0.014001324985346638 0.007482859154470233 1.1405882270326961e-07 6.942871115445217 0.06592826380735106 YHEAWQK ddPTM_KYSE-520_SHP099_60min_R1 1 YHEAWQK 7 0 B4E1E0;P17812-2;P17812;A0A3B3IRI2;A0A3B3IRQ8;A0A3B3ITF6 B4E1E0 CTPS1 CTP synthase;CTP synthase 1 0 138.37 0.0029269 902230000.0 1134500.0 1061400.0 769840.0 726570.0 1128500.0 1128400.0 800550.0 852020.0 894310.0 877520.0 False True 1071567.0234303188 1010408.7508061193 819465.1181875521 795622.9943487633 1217306.529713327 1121357.237041273 881477.4066150838 849064.5414829622 731925.8477204844 869745.8555002286 1.232046139287452 1.161728733073398 0.942189161357075 0.9147764134974417 1.3996117624650264 1.2892929928321781 1.0134884817681689 0.9762214284937619 0.8415399085742375 1.0 19.73023437358981 -6.9674388278435995 8.326904368789416 0.943949029658527 1.147780808776331 0.32765479481242654 0.14212076407284327 0.32323076691984504 72.95623065783425 0.06650932849441525 0.044469372964974614 1.0778570635842471e-07 6.9674388278435995 0.20383177911780404 YHEEFEK ddPTM_KYSE-520_SHP099_60min_R1 9 YHEEFEK 7 0 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 0 ;;;;;;;; 170.06 0.0010707000000000002 11657440000.0 31844390.0 29423090.0 20574400.0 18771050.0 30566760.0 31237410.0 23920630.0 26066410.0 25145930.0 26483960.0 False True 30077918.206482355 28009560.59144155 21900658.74420394 20555044.94827801 32972190.110926155 31042445.737261083 26338760.7232515 25975991.707655855 20580062.989310145 26249332.718609102 1.1458545833875247 1.0670580045482283 0.8343320182260393 0.783069237173629 1.2561153635555458 1.1825994233847312 1.0034068677326413 0.9895867443990504 0.784022329631267 1.0 24.64577741286498 -7.554745281124852 11.105547361012727 0.8900556443465977 1.033354022136285 0.13670570847194896 0.1456603616115498 1.3528097638981043 459.8008721376398 0.10587833187200596 0.040100271732044744 2.7877557411089565e-08 7.554745281124852 0.14329837778968724 YHEEKER ddPTM_KYSE-520_SHP099_60min_R1 1 YHEEKER 7 1 Q12874 Q12874 SF3A3 Splicing factor 3A subunit 3 0 133.55 0.0018713 369420000.0 284830.0 414840.0 145740.0 100520.0 433760.0 534400.0 160980.0 177210.0 223630.0 390440.0 False True 269029.91210547177 394910.46371246525 155134.6335922448 110073.39057756004 467894.44424320187 531064.6113743852 177253.42941339867 176595.29987112494 183024.42925353872 386981.00535772357 0.6952018532712779 1.0204905621851175 0.40088436239613107 0.2844413267152704 1.2090889159034621 1.3723273339565372 0.4580416789437672 0.4563410023390709 0.47295455518379187 1.0 18.56190322905264 -10.539600037232693 2.720561990029056 1.0159205914648977 0.7150273517008147 0.05778991529423316 0.35291508654479303 107816685.811328 108387791.47690856 12590040.126931317 0.09749707411470059 2.8866887704682633e-11 10.539600037232693 -0.300893239764083 YHFFLYK ddPTM_KYSE-520_SHP099_60min_R1 1 YHFFLYK 7 0 Q12792-4;Q12792;Q12792-3;F8VS81;D6RG15;H0Y858;Q6IBS0 Q12792-4 TWF1;TWF2 Twinfilin-1;Twinfilin-2 0 77.748 0.043314 74787000.0 221470.0 268260.0 221790.0 171830.0 335410.0 320600.0 210450.0 188020.0 145700.0 159230.0 False True 209184.6176105004 255372.3869335309 236086.93827654698 188160.6715374267 361804.858778154 318599.0164794687 231724.33979407177 187367.8025041981 119244.55279810644 157819.3460790654 1.3254687895215436 1.6181310674395566 1.4959315454156712 1.1922535241221992 2.2925253954410287 2.0187576770205014 1.4682885561950114 1.1872296214580011 0.7555762697075585 1.0 17.26791454152185 -7.353192385999206 2.5294981705290684 0.8959530184604215 1.6567403267839782 0.5014026861852965 0.3075963263983469 0.2679045287220821 3.250365076937349 0.23327960437984252 0.09284488952467779 4.4341217541644224e-08 7.353192385999206 0.7607873083235567 YHGHS(ph)MSDPGVSYR ddPTM_KYSE-520_SHP099_60min_R1 14 YHGHSMSDPGVSYR 14 0 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial 1 Y(0.155)HGHS(0.838)MS(0.008)DPGVSYR;Y(0.009)HGHS(0.8)MS(0.191)DPGVSYR;YHGHS(0.904)MS(0.096)DPGVSYR;Y(0.15)HGHS(0.425)MS(0.425)DPGVSYR;YHGHS(0.998)MS(0.002)DPGVSYR;YHGHS(1)MSDPGVSYR;Y(0.063)HGHS(0.469)MS(0.469)DPGVSYR;YHGHS(0.995)MS(0.005)DPGVSYR;YHGHS(0.998)MS(0.002)DPGVSYR;YHGHS(0.825)MS(0.175)DPGVSYR;YHGHS(0.996)MS(0.004)DPGVSYR;YHGHS(0.998)MS(0.002)DPGVSYR;YHGHS(0.869)MS(0.131)DPGVSYR;YHGHS(0.998)MS(0.002)DPGVSYR 229.92 7.363600000000002e-15 25703680000.0 7108140.0 12413140.0 10969980.0 18731370.0 9867340.0 9600201.0 10761660.0 9498082.0 13542750.0 9810630.0 True False 6713837.304474212 11816794.121897003 11677122.46338858 20511593.773008242 10643843.520515278 9540282.584545258 11849553.616480282 9465135.370411005 11083727.984945484 9723715.45075464 0.690460075521149 1.215255031036508 1.2008910094630896 2.109439943701394 1.0946272105987251 0.9811355168568671 1.2186240616040094 0.9734072760918187 1.139865521680326 1.0 23.213076245106315 -5.9628259459986825 24.999677119160562 1.0670471102015608 1.3292715903712278 0.1075311625826848 0.3309300212687379 382.5926604318402 257293.2513738568 0.10671910280850795 0.12100784546347139 1.0893665958283175e-06 5.9628259459986825 0.26222448016966693 YHGHSMS(ph)DPGVSYR ddPTM_KYSE-520_SHP099_60min_R1 2 YHGHSMSDPGVSYR 14 0 P08559-3;P08559;P08559-2;P08559-4;Q5JPU3;P29803 P08559-3 PDHA1;PDHA2 Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial;Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial 1 YHGHS(0.367)MS(0.633)DPGVSYR;Y(0.155)HGHS(0.4)MS(0.445)DPGVSYR 107.37 0.00044143 1762860000.0 832970.0 553563.0 576010.0 1016350.0 684300.0 477400.0 699010.0 425406.0 1215720.0 519570.0 True False 786763.4936154715 526969.0025649976 613140.5262485866 1112943.59842323 738150.5168655999 474420.3695174618 769672.7524801817 423930.36587650725 994975.8938072354 514967.01401934336 1.5277939599951131 1.0233063249080327 1.1906403896882523 2.161193956359747 1.4333937840101605 0.9212636083515079 1.494605929169807 0.8232184864962699 1.9321157796912052 1.0 18.974120498509723 -6.0305974141639265 24.225619029254318 1.2325607017248428 1.4698336601379614 0.07731879692764854 0.4043847693420265 1373.8408205758371 1087740.8889822017 0.1330293211606723 0.1332194920011601 9.319714016073236e-07 6.0305974141639265 0.23727295841311857 YHHCVGEK ddPTM_KYSE-520_SHP099_60min_R1 2 YHHCVGEK 8 0 J3KSX6;Q8TCD5;J3KSY6;J3KRC4;Q8TCD5-2;J3KSF0;J3QQX8 J3KSX6 NT5C 5(3)-deoxyribonucleotidase, cytosolic type 0 ; 114.6 0.0011453 1267450000.0 805400.0 1049270.0 601460.0 539560.0 934320.0 953650.0 748860.0 791520.0 684580.0 615820.0 False True 760722.8564749047 998861.4942136203 640231.0739700249 590839.6201753712 1007845.6684463933 947697.9166114944 824562.076969299 788774.4018621568 560277.528857432 610364.3139007108 1.2463422895963296 1.6365004825234706 1.0489326774012098 0.9680114101026626 1.6512198460710494 1.552675828236017 1.3509342833294022 1.2923009813946436 0.9179395257838967 1.0 19.219311089191983 -7.701532641717605 4.867659408322794 0.9570892377273037 1.3519524942318184 0.33806426079536056 0.21586409044334515 0.23217544386442326 10.673767972868772 0.17525081116958544 0.058837789691029006 1.9882333684999713e-08 7.701532641717605 0.3948632565045147 YHHHHGQDSLK ddPTM_KYSE-520_SHP099_60min_R1 3 YHHHHGQDSLK 11 0 K7EN08;Q14938-6;Q14938-5;Q14938-3;Q14938-4;Q14938;C9JWJ8;Q14938-2 K7EN08 NFIX Nuclear factor 1;Nuclear factor 1 X-type 0 ;; 162.38 2.1899e-05 1321497000.0 332374.2 526896.5 361035.3 1038691.0 204828.5 286513.7 586697.7 485014.5 586519.9 135023.5 False True 313936.74055445864 501583.60125223006 384308.21311490465 1137407.8803461634 220947.33763525588 284725.4617214396 646006.8291337632 483332.09790273476 480022.6711234745 133827.29683669357 2.345834878048449 3.747991725965303 2.871672836550433 8.49907236588748 1.6509885715234385 2.1275589394059393 4.827167882812957 3.611610705195174 3.586881618846679 1.0 17.030012887833017 YHIEVNR ddPTM_KYSE-520_SHP099_60min_R1 2 YHIEVNR 7 0 Q15029-3;Q15029;Q15029-2 Q15029-3 EFTUD2 116 kDa U5 small nuclear ribonucleoprotein component 0 ; 115.46 0.0046637 575810000.0 647300.0 590460.0 382520.0 326040.0 579830.0 583370.0 413480.0 433440.0 423200.0 452250.0 False True 611392.978639441 562093.4153014706 407177.8512536402 357026.74357249925 625459.3222185898 579728.9714398853 455278.593575922 431936.4978056561 346357.54800383473 448243.41684517614 1.363975366202906 1.253991456824046 0.9083855689826672 0.7965019231856711 1.3953564039393898 1.2933351604361085 1.0156949917530542 0.963620393681872 0.7726996872403975 1.0 18.773922869455593 -7.105909771034316 2.986742574515822 0.8980579851295054 1.153590031034686 0.27030097731223723 0.18794472555624658 0.4165219026681183 7.081295391328711 0.11049837157778937 0.05868204052042309 7.835924249172109e-08 7.105909771034316 0.25553204590518064 YHPDEVGK ddPTM_KYSE-520_SHP099_60min_R1 1 YHPDEVGK 8 0 Q9BXP5-4;Q9BXP5-2;Q9BXP5-3;Q9BXP5 Q9BXP5-4 SRRT Serrate RNA effector molecule homolog 0 117.04 0.0016834 320120000.0 477860.0 471480.0 422520.0 364200.0 515610.0 494940.0 427560.0 460830.0 483150.0 494740.0 False True 451352.15320970677 448829.3930940917 449756.3152559022 398813.45849927765 556185.5735804068 491850.89587132883 470781.93738348 459231.48828853073 395422.1392203517 490356.9885018958 0.9204562467614587 0.9153115049207796 0.9172018056272963 0.8133124801946935 1.134246246351308 1.003046570976784 0.960079999719755 0.9365248157093519 0.806396459094868 1.0 18.90347291350549 YHPDKNPEGR ddPTM_KYSE-520_SHP099_60min_R1 1 YHPDKNPEGR 10 1 O75165 O75165 DNAJC13 DnaJ homolog subfamily C member 13 0 90.65299999999999 0.0035394 297470000.0 325870.0 462260.0 467520.0 130000.0 271930.0 354160.0 171210.0 182450.0 214760.0 215650.0 False True 307793.3414942605 440052.3357335937 497657.0872584486 142355.16091407478 293329.34392994666 351949.55607101804 188517.57764857716 181817.12353415007 175764.99765903482 213739.50877316142 1.4400395287747993 2.0588254284827365 2.328334570033118 0.666021746429455 1.3723683824933497 1.6466284501689246 0.8819968696037759 0.8506481772029798 0.8223327482499814 1.0 17.70549408268149 -5.751518404265883 0.6495446839476512 0.8842941268978742 1.9558645712010612 0.41240090657273276 0.4109862715259247 0.9063681191081097 0.809316188908189 0.2858531051036704 0.5464077017871855 1.772072947720565e-06 5.751518404265883 1.071570444303187 YHPDKNPNEGEK ddPTM_KYSE-520_SHP099_60min_R1 9 YHPDKNPNEGEK 12 1 P31689;P31689-2 P31689 DNAJA1 DnaJ homolog subfamily A member 1 0 ;;;;;;;; 176.25 1.2176e-06 20704080000.0 12656130.0 11201810.0 8510030.0 7807870.0 12406520.0 10854230.0 9071790.0 10287610.0 10334370.0 8085550.0 False True 11954069.239530351 10663658.233340384 9058600.15032942 8549927.617278293 13382842.540557357 10786484.72439782 9988855.065338403 10251924.682056224 8457908.916267458 8013918.317462719 1.4916634742185793 1.3306422415241934 1.130358432851791 1.0668847969971922 1.6699499558655957 1.3459688877653697 1.2464383425985515 1.2792649333244113 1.0554024362635768 1.0 22.934076374377135 -7.769512703650511 2.086200115817841 0.992325661832104 1.3231720537816094 0.3509838426351848 0.160759350363459 0.37460062286290413 3.137650537037938 0.1588223276593801 0.04590983397926123 1.7001502214191364e-08 7.769512703650511 0.3308463919495054 YHPDTNKDDPK ddPTM_KYSE-520_SHP099_60min_R1 1 YHPDTNKDDPK 11 1 I3L1T6;Q96EY1-2;Q96EY1 I3L1T6 DNAJA3 DnaJ homolog subfamily A member 3, mitochondrial 0 61.435 0.035932 456110000.0 341230.0 349400.0 288720.0 281650.0 362290.0 388310.0 284980.0 326440.0 395770.0 303910.0 False True 322301.29167485965 332614.29953990807 307331.3531683335 308417.93131883984 390800.16185187554 385886.4132537193 313788.55953677633 325307.6558316686 323908.1445498054 301217.5938384023 1.0699949082249438 1.104232642261758 1.0202968201559006 1.0239041066249948 1.297401512547546 1.2810885590592036 1.041733836122196 1.0799756139284153 1.0753294335243118 1.0 18.200446513377972 -7.862520620860255 1.2812741858337993 1.0066317221638328 1.123137121876046 0.1357928455742936 0.09260075386960194 0.9777571510407176 3.4923418992075073 0.0976745580331192 0.030609871516575664 1.372395796343998e-08 7.862520620860255 0.11650539971221319 YHPGYFGK ddPTM_KYSE-520_SHP099_60min_R1 4 YHPGYFGK 8 0 P46776;E9PLL6 P46776 RPL27A 60S ribosomal protein L27a 0 ;;; 123.96 0.0015175999999999998 6359830000.0 20767500.0 17841200.0 12055320.0 12113910.0 19879100.0 20156200.0 14412050.0 15628590.0 14817060.0 14602370.0 False True 19615485.376015108 16984081.97181285 12832425.216394003 13265212.364220163 21443472.073393174 20030397.67923723 15868960.662053477 15574378.069030333 12126655.411686439 14473004.36227194 1.3553153778595222 1.1735007844042913 0.8866455709669666 0.9165486330398521 1.481618573217028 1.383983392657038 1.0964524203019312 1.0760984850961173 0.8378810030140019 1.0 23.78686109739051 -7.44763352352307 2.545535952481313 0.9246443505458252 1.183070116979035 0.24401612147888874 0.1846488141362926 0.4901421697180818 5.968285487978985 0.1549107227473798 0.05630951854083895 3.567520492622824e-08 7.44763352352307 0.2584257664332098 YHRPEETHK ddPTM_KYSE-520_SHP099_60min_R1 5 YHRPEETHK 9 1 A0A0C4DGG8;Q8IX12-2;Q8IX12;F5H1H2;F5H2E6 A0A0C4DGG8 CCAR1 Cell division cycle and apoptosis regulator protein 1 0 ;;;; 120.68 0.00074512 2314890000.0 1317990.0 1410040.0 1203850.0 1124360.0 1507700.0 1531540.0 1190080.0 1410030.0 1278730.0 819300.0 False True 1244878.4673520722 1342299.5618868107 1281452.0972281026 1231218.8363488396 1626347.412360465 1521981.0907640827 1310384.9004615326 1405138.9350334748 1046544.8661600747 812041.6394057557 1.533022947275293 1.652993512585257 1.5780620537708596 1.5162016042057076 2.002788198830063 1.8742648368104053 1.6136917577532843 1.7303779348824304 1.2887822685126422 1.0 19.631194181433433 -7.942182530174591 3.106059627040264 1.0027523262542402 1.6923121295734687 0.7067354771188652 0.14550150420230837 0.127192191013787 2.621987061469624 0.15052696776316793 0.04034357445360257 1.142398093943103e-08 7.942182530174591 0.6895598033192285 YHSDDYIK ddPTM_KYSE-520_SHP099_60min_R1 7 YHSDDYIK 8 0 Q13547;Q5TEE2 Q13547 HDAC1 Histone deacetylase 1 0 ;;;;;; 155.88 0.00050456 3604140000.0 5455280.0 5128900.0 3601060.0 3501880.0 5134640.0 5273260.0 3944370.0 4191030.0 4446920.0 4157390.0 False True 5152664.743568936 4882499.94536415 3833190.0894997166 3834697.6223213887 5538706.95589476 5240347.628323524 4343105.4129415285 4176492.2951237597 3639471.425730649 4120558.759000481 1.25047719130665 1.1849121031703216 0.9302597811830571 0.9306256375898803 1.34416405148856 1.271756558956259 1.0540088534000254 1.0135742600444912 0.8832470639524314 1.0 21.97440855337845 -7.210007423971555 2.7221312183438737 0.9514789490899779 1.1419497217728947 0.2847373586194357 0.1313363533132806 0.42702706587327166 6.176144961052145 0.08728367326164264 0.04128856358523674 6.165844616754558e-08 7.210007423971555 0.1904707726829168 YHSDFNR ddPTM_KYSE-520_SHP099_60min_R1 9 YHSDFNR 7 0 Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0 Q15424-2 SAFB Scaffold attachment factor B1 0 ;;;;;;;; 164.0 0.0014667999999999999 6714030000.0 1926217.0 2712298.0 2680121.0 1188328.0 1851611.0 2060811.0 1343472.0 1512105.0 1356317.0 1803893.0 False True 1819365.9031916077 2581995.1328376993 2852885.8880052185 1301266.3358361598 1997322.251474542 2047948.7141299762 1479283.2607831862 1506859.860682959 1110044.0227691806 1787911.9114275184 1.0175925847146325 1.4441400140212517 1.5956523751370923 0.7278134495995346 1.1171256473591167 1.1454416188182546 0.8273803934792769 0.8428043076685139 0.6208605780152171 1.0 20.769844227502396 -5.9601552940522025 0.7437345567153001 0.8079787444508006 1.3274637991510798 0.35891759658837086 0.2331747625594701 0.7636439234625648 0.9385133159970892 0.15198824830323562 0.2097141381566866 1.096086190005875e-06 5.9601552940522025 0.5194850547002792 YHSDFNRQDR ddPTM_KYSE-520_SHP099_60min_R1 1 YHSDFNRQDR 10 1 Q15424-2;Q15424;Q15424-4;Q15424-3;K7EII0 Q15424-2 SAFB Scaffold attachment factor B1 0 114.5 0.00060595 312110000.0 86842.0 113600.0 91351.0 51743.0 71312.0 68666.0 53652.0 61574.0 100510.0 50223.0 False True 82024.70114476496 108142.48548292379 97239.63162676776 56660.639162899795 76923.84869022321 68237.43002364055 59075.66775306033 61360.414165479626 82259.91765091076 49778.06329290275 1.6478082054361458 2.1724928277461233 1.9534635378357916 1.1382652400415576 1.5453363108482137 1.3708333653344384 1.1867811611200874 1.232679821318566 1.6525335099294474 1.0 15.603222480256536 -5.2509929714284365 24.392781234239465 1.3214549550289383 1.9493787520259938 0.6335405006205977 0.21582987321053254 309.77323896199044 723330.6599830906 0.05632961901098384 0.09616806875350205 5.610570560413679e-06 5.2509929714284365 0.6279237969970555 YHTINGHNAEVR ddPTM_KYSE-520_SHP099_60min_R1 13 YHTINGHNAEVR 12 0 P22626;P22626-2;A0A087WUI2 P22626 HNRNPA2B1 Heterogeneous nuclear ribonucleoproteins A2/B1 0 ;;;;;;;;;;;; 266.78 1.2452e-21 56925990000.0 6129000.0 6840926.0 5033887.0 6447770.0 6651961.0 5703743.0 5533239.0 5371176.0 5145507.0 4569840.0 False True 5789012.152141403 6512277.646520724 5358379.41052397 7060564.122207261 7175432.486219226 5668143.82424096 6092592.797328639 5352544.644097898 4211212.636475817 4529354.77288172 1.2781096739874604 1.4377936754946234 1.1830337165474007 1.5588454595079344 1.5842063265125923 1.251424122962818 1.3451348156268044 1.1817455051533616 0.9297599432239902 1.0 22.110874115784718 -7.461948073856288 1.778746790703446 0.9560360778642573 1.3905003740019606 0.644669928513864 0.12218258389232538 0.23812039250778247 1.3461823402730164 0.1075568410429693 0.03638768674757354 3.451850086948165e-08 7.461948073856288 0.4344642961377033 YHTINGHNCEVK ddPTM_KYSE-520_SHP099_60min_R1 3 YHTINGHNCEVK 12 0 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ;; 176.25 1.3709999999999999e-06 2364607000.0 924567.0 1001067.0 788219.0 985227.0 1073537.0 1068127.0 921663.0 867352.0 831927.0 761368.0 False True 873279.425431379 952974.2386877992 839028.8579349903 1078862.6778607 1158018.2543100175 1061460.4231914077 1014833.6906040576 864343.3583534778 680870.0279730299 754622.8718553411 1.157239540439988 1.2628483368716148 1.111851878902273 1.4296713207329272 1.5345655392910036 1.4066104577266065 1.344822332390951 1.1453977749552888 0.9022652948472394 1.0 19.52539630187375 -7.516476396278196 3.1651002118039284 0.9544767727167517 1.3255716094757497 0.5999068828853911 0.12081168215149773 0.1924090911331771 3.867540442888575 0.1014951951493017 0.036400098906083936 3.044553455721416e-08 7.516476396278196 0.371094836758998 YHTINGHNCEVKK ddPTM_KYSE-520_SHP099_60min_R1 2 YHTINGHNCEVKK 13 1 P51991;P51991-2 P51991 HNRNPA3 Heterogeneous nuclear ribonucleoprotein A3 0 ; 150.49 6.293e-06 1815690000.0 1775300.0 2242600.0 1749250.0 1847440.0 1959160.0 1715520.0 1382630.0 1526250.0 1984810.0 1238740.0 False True 1676820.5700271875 2134862.1297887727 1862009.453898957 2023020.142146912 2113334.7459044443 1704812.803340166 1522399.733568437 1520955.7949794293 1624418.5369884016 1227765.727325138 1.3657496155071696 1.7388188009123475 1.5165836710197222 1.6477248852306283 1.7212850129874893 1.3885489433349334 1.2399757540758212 1.238799683953589 1.3230688077011468 1.0 20.227603872483467 -6.5283827829119625 3.2853338978419493 1.2215773412329967 1.6034079947422746 0.6845267454332233 0.126660959240327 0.14322724029276734 3.2341155225704936 0.04808992974727862 0.03819890566566301 2.962219367387585e-07 6.5283827829119625 0.3818306535092779 YHTVNGHNCEVR ddPTM_KYSE-520_SHP099_60min_R1 16 YHTVNGHNCEVR 12 0 F8W6I7;P09651-3;P09651-2;P09651;F8VTQ5;F8VZ49;A0A2R8Y4L2;H0YH80 F8W6I7 HNRNPA1 Heterogeneous nuclear ribonucleoprotein A1;Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed 0 ;;;;;;;;;;;;;;; 235.31 3.6961999999999996e-15 36994640000.0 3222889.0 2221180.0 1743900.0 2363103.0 2796062.0 1990528.0 2049890.0 1759035.0 2254531.0 1565012.0 False True 3044108.922500057 2114471.17874085 1856314.5843386536 2587691.5986271766 3016096.171983436 1978104.3764031264 2257112.8861984783 1752933.3181468556 1845165.0025014968 1551147.211240911 1.9624887312048116 1.363166025389223 1.1967365643223573 1.6682437230164857 1.9444293553353795 1.2752525112175856 1.4551248713478315 1.1300883020280947 1.1895486057866635 1.0 20.564904180810316 -7.134566078966543 1.24988242125794 1.0650715420680135 1.5776995148743143 0.44086476971699395 0.23878306804886304 0.5093505935792328 1.4461912801533536 0.20021709906829444 0.08385328314064583 7.335570934227904e-08 7.134566078966543 0.5126279728063008 YIDLEPDTPLS(ph)PEELK ddPTM_KYSE-520_SHP099_60min_R1 1 YIDLEPDTPLSPEELK 16 0 A0A1B0GUN5;Q5VTI5;Q9Y2H5 A0A1B0GUN5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 YIDLEPDTPLS(1)PEELK 127.18 8.282299999999999e-05 37459000.0 121310.0 129670.0 90439.0 102080.0 100070.0 136940.0 125060.0 157250.0 154710.0 148390.0 True False 114580.6924745105 123440.45856136199 96268.84264751626 111781.65250852882 107944.93967958583 136085.3066646861 137702.2852679812 156704.536452426 126618.56392172314 147075.38004567317 0.7790609987812258 0.8393006261349008 0.6545544374430355 0.7600296696416209 0.7339429593591009 0.9252759137690197 0.9362701304951161 1.0654708925706162 0.8609093097866052 1.0 17.166196238645192 -6.361317013139566 3.414757489294447 0.967760941699663 0.7523692998366212 0.7155565970646695 0.06461138976476684 0.13615786587293388 2.9908506492186424 0.023823363833031772 0.020826905773030008 4.3519408790913113e-07 6.361317013139566 -0.21539164186304183 YIDLEPDTPLS(ph)PEELKEK ddPTM_KYSE-520_SHP099_60min_R1 9 YIDLEPDTPLSPEELKEK 18 1 A0A1B0GUN5;Q5VTI5;Q9Y2H5 A0A1B0GUN5 PLEKHA6 Pleckstrin homology domain-containing family A member 6 1 YIDLEPDT(0.045)PLS(0.955)PEELKEK;YIDLEPDTPLS(1)PEELKEK;YIDLEPDT(0.095)PLS(0.905)PEELKEK;YIDLEPDT(0.001)PLS(0.999)PEELKEK;YIDLEPDT(0.004)PLS(0.996)PEELKEK;YIDLEPDTPLS(1)PEELKEK;YIDLEPDT(0.024)PLS(0.976)PEELKEK;YIDLEPDT(0.015)PLS(0.985)PEELKEK;YIDLEPDTPLS(1)PEELKEK 279.19 6.179399999999999e-31 2771583000.0 2908201.0 3054809.0 2546499.0 2410981.0 2510343.0 2919328.0 2552627.0 3011142.0 4112396.0 3053002.0 True False 2746877.293175033 2908051.39027821 2710650.400082457 2640119.9093521307 2707892.7122021657 2901107.3910822608 2810671.448398776 3000697.051207828 3365688.551466868 3025954.777479611 0.9077720901906444 0.961035971826517 0.8958000364897131 0.8724915286246111 0.8948886917793376 0.9587411592114611 0.9288544129333784 0.9916529729856635 1.1122732489314429 1.0 21.528958996140748 -7.412626340762722 2.7575537864854525 1.0563923735160288 0.9159928367143348 0.6961378460243625 0.036946567575126515 0.15373329337165711 2.199940462474936 0.02645802038266054 0.010196715685763394 3.866995433663324e-08 7.412626340762722 -0.14039953680169392 YIDQEELNK ddPTM_KYSE-520_SHP099_60min_R1 8 YIDQEELNK 9 0 P08238;P07900;P07900-2;Q14568;Q58FF8 P08238;P07900;Q58FF8 HSP90AB1;HSP90AA1;HSP90AA2P;HSP90AB2P Heat shock protein HSP 90-beta;Heat shock protein HSP 90-alpha;Heat shock protein HSP 90-alpha A2;Putative heat shock protein HSP 90-beta 2 0 ;;;;;;; 214.93 5.22e-08 17877400000.0 15064770.0 18987200.0 12036630.0 9358670.0 15949450.0 17889880.0 13761930.0 15487110.0 15148240.0 15263770.0 False True 14229097.177225536 18075026.411631767 12812530.42908894 10248115.18301327 17204580.975043196 17778222.623005956 15153120.187893718 15433388.830128666 12397701.47205483 15128544.872833347 0.9405463180254058 1.1947630498217632 0.8469109578474184 0.6774025703830928 1.1372264232720644 1.17514425692921 1.0016244334975337 1.0201502497337158 0.8194906764838731 1.0 23.850769893953633 -3.39013472335499 17.50728265238997 0.9859166127606707 0.9396436931515769 0.0 0.1575421073962196 0.0 0.0 0.037629447399225316 0.0 0.0004072539231572819 3.39013472335499 -0.04627291960909374 YIEEFNKS(ph)WDYTPNR ddPTM_KYSE-520_SHP099_60min_R1 1 YIEEFNKSWDYTPNR 15 1 Q9Y4B5;Q9Y4B5-2;Q9Y4B5-3;Q9Y4B5-4 Q9Y4B5 MTCL1 Microtubule cross-linking factor 1 1 YIEEFNKS(0.974)WDYT(0.026)PNR 149.47 3.8418e-06 705680000.0 392710.0 401330.0 361490.0 356040.0 356720.0 374870.0 408140.0 429080.0 468540.0 392790.0 True False 370925.5934520234 382049.5043913889 384792.22380445054 389877.93455267075 384791.83454083983 372530.2972790337 449398.774262545 427591.62162802526 383464.9469322229 389310.1861859961 0.9527764918917654 0.981349879730251 0.988394954609826 1.0014583444944936 0.9883939547294619 0.9568984077417751 1.1543463033043813 1.0983314508594437 0.9849856503600947 1.0 18.570560567305332 -6.729522762806455 24.99999858563641 1.067610287763473 0.9803369421282736 0.4165681274560763 0.046637826395321796 178.1856189802657 139570.89192661157 0.017781168239928483 0.013772009961036367 1.8641344702548973e-07 6.729522762806455 -0.0872733456351994 YIEIDS(ph)DEEPR ddPTM_KYSE-520_SHP099_60min_R1 3 YIEIDSDEEPR 11 0 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 YIEIDS(1)DEEPR;YIEIDS(1)DEEPR;YIEIDS(1)DEEPR 177.42 2.6123e-07 2049680000.0 5297740.0 4685060.0 4276330.0 4496680.0 4332050.0 4627620.0 4815680.0 4902140.0 5046580.0 4780720.0 True False 5003863.801417141 4459982.685181568 4551989.074169915 4924043.115223856 4672957.689007192 4598737.307051514 5302495.930907661 4885135.62050808 4130248.2859290927 4738366.540143874 1.0560313895144984 0.9412489826179947 0.9606663046442373 1.03918577710418 0.9861959072641316 0.9705322009368824 1.1190556673875758 1.0309746152225172 0.8716607824526137 1.0 22.175958373050953 -5.243638165772523 24.580197255916005 1.0066488892600602 0.9815089085117459 0.009327423296322523 0.06471729860112452 3157.6207331550922 4360085.328253335 0.01780399559707096 0.030729948395087057 5.706395049244387e-06 5.243638165772523 -0.02513998074831436 YIEIDS(ph)DEEPRGELLSLR ddPTM_KYSE-520_SHP099_60min_R1 17 YIEIDSDEEPRGELLSLR 18 1 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(0.883)DEEPRGELLS(0.117)LR;YIEIDS(0.922)DEEPRGELLS(0.078)LR;YIEIDS(0.999)DEEPRGELLS(0.001)LR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR;YIEIDS(1)DEEPRGELLSLR 316.96 6.767299999999999e-48 35748240000.0 8358355.0 8599904.0 8196664.0 7463624.0 7394627.0 7822420.0 7159366.0 7494526.0 10042090.0 7607417.0 True False 7894700.386182403 8186751.703120923 8725034.0765661 8172964.580939622 7976542.075227716 7773597.375200623 7883104.583958788 7468529.238541526 8218699.596488251 7540021.203860871 1.0470395470691674 1.085773034554451 1.1571630689975305 1.0839445089033242 1.0578938519620242 1.0309781849446458 1.0455016465898321 0.9905183336510065 1.0900101437751744 1.0 22.84613714993508 -5.892331177254072 2.5130957219553793 1.0320099115510992 1.0983692059501313 0.4036679155309867 0.03557181108858882 0.28496826493909627 3.6598695893147073 0.012067195071774279 0.01407517552498413 1.281353096508475e-06 5.892331177254072 0.0663592943990321 YIEIDSDEEPRGELLS(ph)LR ddPTM_KYSE-520_SHP099_60min_R1 1 YIEIDSDEEPRGELLSLR 18 1 E7EW05;Q9NVU7-2;Q9NVU7 E7EW05 SDAD1 Protein SDA1 homolog 1 YIEIDS(0.365)DEEPRGELLS(0.635)LR 139.6 1.174e-05 2450000000.0 1034500.0 940410.0 953090.0 915570.0 1011000.0 985090.0 874330.0 905250.0 1277700.0 952250.0 True False 977114.2227753778 895231.2920158112 1014527.7063979178 1002585.497523842 1090559.9481968742 978941.6879094184 962715.809038493 902109.8990369376 1045701.888195887 943813.8058392901 1.0352828245677919 0.9485253198004698 1.074923570858073 1.0622704301642303 1.1554820892104767 1.0372190805567743 1.0200272586417551 0.9558134172817411 1.1079535833511065 1.0 19.84814274939769 -4.774000374743047 24.9978822142166 1.052567164644794 0.991904058041557 0.15388259278210104 0.056067409522176856 373.9979563107023 744304.385056337 0.015163351169865688 0.031906546452167575 1.6826726091290786e-05 4.774000374743047 -0.06066310660323704 YIEIFK ddPTM_KYSE-520_SHP099_60min_R1 1 YIEIFK 6 0 P31943;G8JLB6;E9PCY7;H0YB39;D6RBM0;E7EN40;E5RGV0;P55795 P31943;P55795 HNRNPH1;HNRNPH2 Heterogeneous nuclear ribonucleoprotein H;Heterogeneous nuclear ribonucleoprotein H, N-terminally processed;Heterogeneous nuclear ribonucleoprotein H2 0 118.03 0.06297699999999999 1765100000.0 1743100.0 1607800.0 1251400.0 1055400.0 1677000.0 1611400.0 1355900.0 1229800.0 1310500.0 1229100.0 False True 1646406.768216299 1530558.8746429994 1332067.2463107952 1155704.8986824197 1808970.359175233 1601342.6548815216 1492967.604308777 1225534.1108374763 1072546.2350165995 1218211.1302253313 1.351495424205954 1.2563986953229473 1.0934617270032692 0.9486901490291343 1.4849399371688794 1.314503385456118 1.225540932328064 1.006011257351417 0.8804272169293116 1.0 20.216332760148447 -7.324576828584475 3.6416772184761217 0.9421316861214643 1.2366759827526952 0.4597685575415368 0.1387037754809659 0.24039727935479258 6.338183797024524 0.09005968249090976 0.040435120878781955 4.736125166473225e-08 7.324576828584475 0.29454429663123094 YIELFR ddPTM_KYSE-520_SHP099_60min_R1 2 YIELFR 6 0 H0YBR2;H0YBB3;Q6NXG1-2;Q6NXG1-4;Q6NXG1;A0A2U3TZN9;Q6NXG1-5;Q6NXG1-3;Q9H6T0-2;Q9H6T0 H0YBR2;Q9H6T0-2 ESRP1;ESRP2 Epithelial splicing regulatory protein 1;Epithelial splicing regulatory protein 2 0 ; 124.86 0.05857999999999999 1698160000.0 1273040.0 1216340.0 996820.0 881730.0 1345300.0 1264020.0 936630.0 926090.0 1023180.0 936710.0 False True 1202421.9334576752 1157905.2006364379 1061076.612168391 965529.3540982085 1451167.4562900641 1256130.7823155879 1031313.7010279008 922877.6099410309 837396.3042688174 928411.4781493519 1.295139021605508 1.2471896652382488 1.1428947585649059 1.0399799838998602 1.5630649668213359 1.3529892853322913 1.11083687061223 0.9940394228867657 0.9019667722527952 1.0 19.82440483357632 -7.056607327954089 3.079035346005749 0.9614175198167308 1.2679877751676114 0.5275303525567239 0.13081210783433359 0.23215254089037046 4.332383825122675 0.07365522734732796 0.04082698140223438 8.777941294922208e-08 7.056607327954089 0.30657025535088056 YIKDYMK ddPTM_KYSE-520_SHP099_60min_R1 2 YIKDYMK 7 1 Q5W0H4;A0A0B4J2C3;P13693;J3KPG2;P13693-2;E9PJF7;Q9HAU6 Q5W0H4 TPT1;TPT1P8 Translationally-controlled tumor protein;Putative translationally-controlled tumor protein-like protein TPT1P8 0 ; 95.85 0.0067499 3251000000.0 5273400.0 5760000.0 3837600.0 3297200.0 6341400.0 6108300.0 4451800.0 4721700.0 5665000.0 4631100.0 False True 4980873.989737728 5483280.954063739 4084977.8363770973 3610564.8966606734 6840432.102369592 6070175.833941158 4901831.3893810855 4705321.524753069 4636378.80302864 4590072.0569412755 1.0851406966924337 1.1945958333642541 0.8899594136435492 0.7866030972652477 1.4902668231591787 1.322457634354915 1.067920356929551 1.0251084223476423 1.0100884573298448 1.0 22.130085371193292 -6.996274202090354 24.950965864196007 1.0198619040050338 1.1274530543306165 0.07260619946383462 0.1868310920358378 362.69007019959054 2428849.096888407 0.08678145563811004 0.05822107961402727 1.0086158715208146e-07 6.996274202090354 0.10759115032558264 YIMIFR ddPTM_KYSE-520_SHP099_60min_R1 1 YIMIFR 6 0 P55060-4;P55060-3;P55060 P55060-4 CSE1L Exportin-2 0 120.78 0.061203999999999995 66058000.0 114360.0 109020.0 88981.0 83056.0 141260.0 109690.0 95821.0 76619.0 90698.0 77214.0 False True 108016.22282899194 103782.51555764393 94716.85763463391 90949.61726830297 152376.35834054457 109005.38402256036 105507.52180284042 76353.22657200898 74229.52951051925 76529.94403158301 1.4114243018969792 1.3561033771932995 1.2376444126960993 1.1884187087706366 1.9910684669736676 1.4243494543465904 1.3786436556035988 0.9976908716998263 0.9699409878032262 1.0 16.22373672412949 -7.2354682861046244 3.8492000892437073 0.9795084697168825 1.4339360817278572 0.49269877207227564 0.20411356520693827 0.20663126228134027 6.832663810815838 0.11851441018717024 0.060085068901292844 5.8147589242039437e-08 7.2354682861046244 0.4544276120109747 YIQDIYSCGEIVEHLEESTAFR ddPTM_KYSE-520_SHP099_60min_R1 1 YIQDIYSCGEIVEHLEESTAFR 22 0 Q9UJX2-3;Q9UJX2 Q9UJX2-3 CDC23 Cell division cycle protein 23 homolog 0 175.86 1.1629e-09 39366000.0 60249.0 53133.0 30663.0 65497.0 38638.0 30475.0 31508.0 31114.0 35911.0 19877.0 False True 56906.86786659616 50580.41092574104 32639.58604253466 71721.81518760885 41678.590779852515 30284.794220872718 34693.13612844676 31006.07279606219 29390.46764264107 19700.905244072004 2.888540763055516 2.5674155729955945 1.6567556484418857 3.6405339906494865 2.1155672931523584 1.537228561108145 1.7609919797409264 1.5738400044024325 1.4918333588495711 1.0 14.265974301674161 -6.051367454617493 4.788404998316447 1.5430419965198736 2.6361520328852674 0.5736414421847054 0.4903606045064382 0.1680456973031132 8.371206639018984 0.16065167727891014 0.16533860808012266 8.884490869615189e-07 6.051367454617493 1.0931100363653938 YIQELWR ddPTM_KYSE-520_SHP099_60min_R1 2 YIQELWR 7 0 A0A2R8YEM3;E7EQV9;E7ENU7;P61313;E7EX53;A0A2R8Y738;P61313-2 A0A2R8YEM3 RPL15 Ribosomal protein L15;60S ribosomal protein L15 0 ; 137.18 0.014924000000000002 339200000.0 540670.0 533870.0 461850.0 400600.0 520790.0 670750.0 555060.0 646660.0 764500.0 640790.0 False True 510677.95730107644 508222.08384479326 491621.58998612786 438672.9035552177 561773.2101102382 666563.60044792 611170.8816635674 644416.8873915783 625686.0714766805 635113.099127076 0.8040740428798776 0.8002072143423169 0.7740693597122018 0.6907004502948321 0.884524678962473 1.049519528669887 0.9623024348003282 1.0146490259408754 0.98515693084688 1.0 19.27665400021247 -6.007455481718816 4.728378919244864 0.9989035176235153 0.7705127285377248 0.9039542840743704 0.03608549461069986 0.055646977223620206 3.358079091214482 0.011980675377552822 0.0128428471684833 9.829796302571306e-07 6.007455481718816 -0.22839078908579047 YIS(ph)PDQLADLYK ddPTM_KYSE-520_SHP099_60min_R1 6 YISPDQLADLYK 12 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 1 Y(0.141)IS(0.859)PDQLADLYK;YIS(1)PDQLADLYK;YIS(1)PDQLADLYK;YIS(1)PDQLADLYK;YIS(1)PDQLADLYK;YIS(1)PDQLADLYK 221.73 6.331199999999999e-11 2709680000.0 3353380.0 3500790.0 3064570.0 2618140.0 2742690.0 3176680.0 2689800.0 3066700.0 3806800.0 3281220.0 True False 3167361.3266027025 3332606.7936070827 3262117.0856853696 2866967.238427504 2958524.099228571 3156853.161790386 2961711.233918249 3056062.3334731627 3115581.081618612 3252150.9435505313 0.9739281421989412 1.0247392730082552 1.003064477113094 0.881560323672276 0.9097130331836956 0.970696999181685 0.9106930414136328 0.9397049480540749 0.9580062966625961 1.0 21.6329627887476 -5.221304479527999 23.016527804468748 0.9350805026212872 1.0029936038773526 0.40992337323602224 0.03383844107146845 183.53361746403365 105251.68447445938 0.008958928763062486 0.015516771808318255 6.007524082863708e-06 5.221304479527999 0.06791310125606542 YISENES(ph)PRPSQK ddPTM_KYSE-520_SHP099_60min_R1 4 YISENESPRPSQK 13 1 O94782 O94782 USP1 Ubiquitin carboxyl-terminal hydrolase 1 1 YIS(0.003)ENES(0.935)PRPS(0.062)QK;YISENES(1)PRPSQK;YISENES(1)PRPSQK;YISENES(1)PRPSQK 252.17 3.2565e-16 2121670000.0 1504250.0 1442600.0 1228350.0 1258820.0 1351320.0 1262790.0 1103560.0 1232750.0 1394540.0 1189330.0 True False 1420806.25385197 1373295.3306132543 1307531.4064294908 1378457.8743219674 1457661.1960409505 1254908.4592018346 1215118.6145077026 1228473.8779760115 1141326.6894925982 1178793.4614847377 1.2053055096372927 1.1650008041981619 1.1092116211627119 1.1693803192509604 1.2365704796198713 1.0645702578136351 1.030815536571786 1.0421451408703093 0.9682159994805632 1.0 20.168879532600027 -6.461589092466811 4.314605343824742 1.0167100499915147 1.1719418323562403 0.8282326349080911 0.03603855400814221 0.09832700471286566 3.6641277085822312 0.014104789128499372 0.011979819544663359 3.4547045146804243e-07 6.461589092466811 0.15523178236472557 YISLIYTNYEAGKDDYVK ddPTM_KYSE-520_SHP099_60min_R1 4 YISLIYTNYEAGKDDYVK 18 1 P09211 P09211 GSTP1 Glutathione S-transferase P 0 ;;; 231.13 2.9461e-20 2210120000.0 1759490.0 1739590.0 1136970.0 2150970.0 1537090.0 1579840.0 1367710.0 1507180.0 1160000.0 767490.0 False True 1661887.5822436446 1656017.485222177 1210260.9054163194 2355397.542087291 1658050.2381542367 1569979.6325481064 1505971.474363271 1501951.944358455 949373.2412203415 760690.6356981846 2.1847088740856058 2.176992074711469 1.5910027659345454 3.0963935028928504 2.179664321268302 2.063887155791174 1.9797423600213577 1.9744583065360317 1.2480411834555822 1.0 19.53695031963991 -7.7524953760954665 1.3203149835456698 0.9690784561165591 2.2148043596629936 0.586190605266298 0.35305201508996836 0.29475513062999237 1.0382844738325927 0.33361799461268976 0.10558281730822025 1.768091042382123e-08 7.7524953760954665 1.2457259035464345 YISPDQLADLYK ddPTM_KYSE-520_SHP099_60min_R1 4 YISPDQLADLYK 12 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ;;; 227.37 7.6755e-11 10777410000.0 6082200.0 8675590.0 5120520.0 4303340.0 6697250.0 8661070.0 6052010.0 6854630.0 6562470.0 7090830.0 False True 5744808.241434891 8258801.6340739215 5450596.912321674 4712328.139753654 7224285.472860064 8607013.049469206 6663806.2327256845 6830852.888412676 5370890.874406249 7028010.762782259 0.8174159709397809 1.1751264920949573 0.7755532961312489 0.670506676613018 1.0279274913916188 1.22467271892194 0.948178148504657 0.9719468451281181 0.7642121015022483 1.0 22.744684970033113 -3.128469937529598 14.853259348178048 0.9422369692352309 0.9252193558540007 0.0 0.1716096804265364 0.0 0.0 0.04061556921598073 0.0 0.0007439265567602422 3.128469937529598 -0.0170176133812302 YKAEDEK ddPTM_KYSE-520_SHP099_60min_R1 8 YKAEDEK 7 1 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PS65;E9PM13 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 ;;;;;;; 120.07 0.0027757 54266400000.0 46804300.0 39720900.0 18836130.0 20816000.0 46072500.0 53743300.0 31870800.0 35475100.0 34117900.0 68427900.0 False True 44207972.176941134 37812648.34171355 20050337.07867361 22794346.38144137 49698143.63333386 53407868.129635066 35092611.49303359 35352045.15805063 27922949.402268484 67821682.0421007 0.6518265375591655 0.5575303826620096 0.2956331437817665 0.336092318785188 0.7327766303773394 0.7874748387467274 0.5174246706421944 0.5212499025917058 0.41171124869676856 1.0 26.015243229225206 -5.7659630241571245 24.999952148153824 0.6369030599573521 0.4554579057922968 0.22060807165748708 0.1818891677433701 206.3771955357433 1140544.472507029 0.05779209246815646 0.06775228970242214 1.7141032400880238e-06 5.7659630241571245 -0.1814451541650553 YKAEDEKQR ddPTM_KYSE-520_SHP099_60min_R1 1 YKAEDEKQR 9 2 E9PKE3;P11142;E9PNE6;A8K7Q2;E9PS65;E9PM13 E9PKE3 HSPA8 Heat shock cognate 71 kDa protein 0 60.434 0.023334 519370000.0 255240.0 335030.0 293850.0 172300.0 215860.0 176210.0 108480.0 145140.0 308890.0 115040.0 False True 241081.3283916744 318934.6559097173 312792.04117662384 188675.34019611587 232846.95392460673 175110.20802821938 119446.21706277478 144636.54321593072 252803.36248323345 114020.83509976571 2.114362065325461 2.7971611997987607 2.7432884604198673 1.65474441606246 2.0421439092326485 1.5357737721794602 1.0475823735044738 1.2685097691959275 2.2171681365255402 1.0 16.798937947498924 -5.631251743064343 1.3024318605404714 1.4245114913492445 2.5747739784549566 0.5587765235877399 0.40825163095937417 0.32817605228965213 1.1545052220664684 0.1560035323877333 0.25416824890209727 2.3374819015248898e-06 5.631251743064343 1.150262487105712 YKAEDEVQR ddPTM_KYSE-520_SHP099_60min_R1 9 YKAEDEVQR 9 1 A0A0G2JIW1;P0DMV9;P0DMV8;P0DMV8-2;V9GZ37 A0A0G2JIW1 HSPA1B;HSPA1A Heat shock 70 kDa protein 1B;Heat shock 70 kDa protein 1A 0 ;;;;;;;; 137.46 0.00050164 10352522000.0 12827736.0 11540055.0 8224260.0 7371068.0 12765766.0 10915877.0 8803690.0 10751068.0 11034334.0 10080835.0 False True 12116155.912622262 10985653.4358243 8754408.958881255 8071612.086527589 13770359.156927234 10847746.962604033 9693652.900934536 10713775.054426135 9030777.09852396 9991526.644670943 1.212643106855398 1.0994969864473696 0.8761833171460826 0.8078457250406919 1.3782037166734435 1.0856946439100736 0.9701873643208188 1.072286091549424 0.9038435686242796 1.0 23.252273699236202 -7.31733909634564 0.012348059830355316 7.061531382195291e-07 2.053790483161122 0.04055841517535608 0.15690452728944376 3152.0476805891617 38.71054465376117 3205.227286957523 3225.4555009091746 4.81571640527298e-08 7.31733909634564 2.053789777007984 YKDAIHFYNK ddPTM_KYSE-520_SHP099_60min_R1 5 YKDAIHFYNK 10 1 P31948;P31948-2;P31948-3 P31948 STIP1 Stress-induced-phosphoprotein 1 0 ;;;; 133.89 0.00029732 13267530000.0 24533010.0 24315590.0 17934760.0 16562760.0 26440120.0 24077730.0 18288340.0 20455490.0 20772110.0 14943940.0 False True 23172115.02995702 23147432.557955325 19090863.326230608 18136879.73062463 28520807.020295925 23927451.955889527 20137103.88419822 20384534.679537237 17000418.44628057 14811548.317809392 1.5644627106333568 1.5627962763435659 1.288917466060977 1.2245093721104676 1.9255790419967462 1.6154591972750871 1.3595542783319543 1.376259540336299 1.1477813177599592 1.0 23.82021912412724 -7.727251897712045 1.3805879283178601 1.0029593494039442 1.515400280967249 0.4788960082370265 0.18329521502742868 0.3829280404966716 1.4411087854691955 0.1848116336112237 0.05811081817729068 1.8739072967394052e-08 7.727251897712045 0.512440931563305 YKDDDDDQLFYTR ddPTM_KYSE-520_SHP099_60min_R1 6 YKDDDDDQLFYTR 13 1 O60568;H7C2V1 O60568 PLOD3 Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 0 ;;;;; 189.09 2.8523e-08 3014010000.0 4815970.0 4464340.0 2731900.0 2285980.0 4049170.0 4165680.0 3108730.0 3025780.0 3286810.0 3259260.0 False True 4548818.543701819 4249866.405289042 2908002.645194546 2503238.8518950525 4367816.642374224 4139680.44593946 3422990.766681045 3015284.27540236 2690008.157737436 3230385.492065906 1.408134897483317 1.3155911007299486 0.9002029795938723 0.7749040657974765 1.3521038442941076 1.281481871469166 1.0596230001305396 0.933413143046905 0.8327204800616888 1.0 21.623274905855464 -4.642451599390822 5.7009296966537795 1.0294976244016412 1.3840637151684805 0.39000969244737427 0.1732970066877497 0.22346562814988333 9.99869412124497 0.049047266899417435 0.13448940399221535 2.2779720997771465e-05 4.642451599390822 0.3545660907668393 YKDDPVDLR ddPTM_KYSE-520_SHP099_60min_R1 2 YKDDPVDLR 9 1 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ; 94.69200000000001 0.0037135999999999996 1055640000.0 4140900.0 4071500.0 2649600.0 2460200.0 3918900.0 3955000.0 3014600.0 3436200.0 3307600.0 3587400.0 False True 3911196.022320502 3875899.0285539087 2820397.455509895 2694016.6683138995 4227295.134509135 3930315.3779672375 3319345.1876607714 3424280.6242151097 2707023.217810687 3555618.426954966 1.1000044303601084 1.0900773264000747 0.7932227581364194 0.75767879024664 1.1889057336586573 1.1053816540525587 0.9335493264679305 0.963061896140432 0.761336817609246 1.0 21.76166907822836 -4.574641050493895 24.930388616216433 0.9447093986955102 1.0975233197198666 0.17834588111694627 0.1343600185287352 159.38749592127726 76765.32990697648 0.03665866923666841 0.09698974317456889 2.662925089459093e-05 4.574641050493895 0.15281392102435642 YKDGCDHIGEHR ddPTM_KYSE-520_SHP099_60min_R1 1 YKDGCDHIGEHR 12 1 Q6NS38 Q6NS38 ALKBH2 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 0 194.12 2.4196e-07 497670000.0 321760.0 389740.0 350700.0 323110.0 368770.0 364630.0 328060.0 367290.0 326260.0 231020.0 False True 303911.33138734195 371016.3053883333 373306.6831398396 353818.2772534364 397790.10098571907 362354.20891736884 361223.5063570596 366015.9567161307 267019.4083453003 228973.34253084022 1.3272782238675158 1.6203471604488693 1.6303499744279588 1.5452378575719177 1.7372769100059806 1.582517007928832 1.5775788673234166 1.5985090345913624 1.166159367697293 1.0 17.804820121504967 -7.863061890292052 3.4848493522497943 1.0061197180994552 1.5865832964950892 0.804989109543631 0.09864839681704535 0.08735226236335672 1.9246745028591332 0.09230000645959982 0.024789760558257802 1.3706864189264726e-08 7.863061890292052 0.580463578395634 YKDGCDHIGEHRDDER ddPTM_KYSE-520_SHP099_60min_R1 2 YKDGCDHIGEHRDDER 16 2 Q6NS38 Q6NS38 ALKBH2 Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2 0 ; 188.58 1.9849e-12 734190000.0 571480.0 689380.0 432520.0 383440.0 288200.0 532130.0 310030.0 482800.0 583070.0 270640.0 False True 539778.8651828639 656261.1500195233 460400.9312564685 419882.02231455984 310879.70036631037 528808.7792863986 341370.85800121736 481125.27948636754 477199.1859985725 268242.34015473386 2.0122806297898235 2.446523355115987 1.7163618949599426 1.5653085268804083 1.1589508956228962 1.971384454002894 1.2726210851139301 1.7936216900316093 1.778985322463647 1.0 18.033177448853614 -4.907008070403478 4.899504529376134 1.5409721508947753 2.2232075861043836 0.4676136902605694 0.3025359240451933 0.17025876058890832 6.864086793036356 0.07596389055884113 0.16543302046681888 1.2387735664465181e-05 4.907008070403478 0.6822354352096083 YKDLDEDELLGNLS(ph)ETELK ddPTM_KYSE-520_SHP099_60min_R1 13 YKDLDEDELLGNLSETELK 19 1 H0YNU8;Q9NYL9 H0YNU8 TMOD3 Tropomodulin-3 1 YKDLDEDELLGNLS(0.929)ET(0.071)ELK;YKDLDEDELLGNLS(0.87)ET(0.13)ELK;YKDLDEDELLGNLS(0.995)ET(0.005)ELK;YKDLDEDELLGNLS(1)ETELK;YKDLDEDELLGNLS(0.969)ET(0.031)ELK;YKDLDEDELLGNLS(1)ETELK;YKDLDEDELLGNLS(0.966)ET(0.034)ELK;YKDLDEDELLGNLS(0.993)ET(0.007)ELK;YKDLDEDELLGNLS(0.862)ET(0.138)ELK;YKDLDEDELLGNLS(0.999)ET(0.001)ELK;YKDLDEDELLGNLS(0.988)ET(0.012)ELK;YKDLDEDELLGNLS(0.999)ET(0.001)ELK;YKDLDEDELLGNLS(0.978)ET(0.022)ELK 355.72 6.732399999999998e-78 61228620000.0 19232790.0 17307490.0 15591800.0 15982710.0 15922630.0 15567550.0 15019750.0 15754800.0 19359630.0 15680860.0 True False 18165908.799083676 16476012.201327868 16596872.375762045 17501701.953023 17175650.393628098 15470387.145960521 16538092.90863395 15700150.275997967 15844409.208557352 15541939.779924465 1.1688315008496297 1.0601001184298722 1.0678765077445633 1.1260950821357552 1.1051162619877024 0.9953961580744014 1.0640945173392202 1.0101795849368727 1.0194614979156968 1.0 23.88966324107363 -6.2512022600107 24.804319062718285 1.021354336115575 1.1021183451885312 0.6338169325112617 0.033252921809680425 454.467754169855 1101167.1856227773 0.010944876391461626 0.010811992066464283 5.607867451073088e-07 6.2512022600107 0.08076400907295622 YKDLDEDELLGNLSETELK ddPTM_KYSE-520_SHP099_60min_R1 2 YKDLDEDELLGNLSETELK 19 1 H0YNU8;Q9NYL9 H0YNU8 TMOD3 Tropomodulin-3 0 ; 233.42 6.5319e-26 450432000.0 594500.0 524760.0 413290.0 310000.0 526020.0 478390.0 438160.0 453220.0 456490.0 471590.0 False True 561521.8998936317 499549.74191918183 439931.3346873806 339462.3067951012 567414.7813556083 475404.1905602395 482453.48882951157 451647.88560234284 373602.9231764423 467412.0794914684 1.2013422941584058 1.0687565936735703 0.9412066011773036 0.7262591654978771 1.2139497592209 1.0170986404062692 1.0321801895971705 0.9662734563764879 0.7993009585522738 1.0 18.83433549310451 -4.45887159028089 3.0099172074754095 0.9665729382781364 1.2003114230959737 0.2637245653370579 0.1249549372769929 0.41462034306025813 6.601134623193079 0.033312775321661575 0.18126375800283942 3.476389341490845e-05 4.45887159028089 0.23373848481783732 YKEEAR ddPTM_KYSE-520_SHP099_60min_R1 3 YKEEAR 6 1 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 0 ;; 72.234 0.041422 2203180000.0 3535090.0 3521110.0 1604280.0 1713940.0 4526100.0 5570100.0 2986040.0 2837900.0 3100490.0 8071100.0 False True 3338991.510672799 3351950.590306135 1707694.4557387575 1876832.3422851504 4882278.320013727 5535334.939776321 3287898.0641420344 2828055.987270843 2537519.1729924586 7999596.333220773 0.41739499989600903 0.4190149665910183 0.21347257844086875 0.23461588111527945 0.6103155855175556 0.6919517822154535 0.4110079968020425 0.35352483668788065 0.31720590230967444 1.0 22.93149577147996 -10.721921120590432 2.840438568821066 1.0956424595262904 0.40998285859870837 0.6111221651189749 0.14175407955734548 58810432.4238119 52725656.20292998 40042524.21883344 0.041556964009255466 1.8970504446552973e-11 10.721921120590432 -0.6856596009275819 YKEEFEK ddPTM_KYSE-520_SHP099_60min_R1 2 YKEEFEK 7 1 Q14847;Q14847-2;C9J9W2;Q14847-3 Q14847 LASP1 LIM and SH3 domain protein 1 0 ; 91.921 0.0077345 5333900000.0 4445000.0 4055400.0 2937500.0 2693000.0 3966300.0 3882800.0 3216500.0 3538300.0 3239800.0 3080600.0 False True 4198426.9891121825 3860572.4967205 3126855.9501661756 2948941.910320024 4278425.244840024 3858566.004948473 3541655.2100148816 3526026.4631454265 2651533.988711774 3053308.280670536 1.3750419555375415 1.2643900130099803 1.0240878623233838 0.9658185938802116 1.401242472607594 1.2637328596577528 1.1599402629717754 1.1548216357540801 0.8684134535309587 1.0 21.541941829534192 -7.664877101802795 5.189372786837836 0.93653239894951 1.1999186820861778 0.39576368364970493 0.1326989548749636 0.22217897532278516 9.266166130221178 0.10370113792710363 0.036384744422567436 2.1633306241103942e-08 7.664877101802795 0.2633862831366678 YKEEHRR ddPTM_KYSE-520_SHP099_60min_R1 2 YKEEHRR 7 2 A0A1W2PNZ9;Q15652-3;Q15652;Q15652-2 A0A1W2PNZ9 JMJD1C Probable JmjC domain-containing histone demethylation protein 2C 0 ; 71.223 0.017694 357670000.0 725040.0 749310.0 422710.0 349810.0 1037880.0 1042260.0 543680.0 512490.0 520500.0 447990.0 False True 684820.5858685932 713312.0228627592 449958.5629599135 383055.8372257881 1119555.2512705966 1035754.8687332845 598640.4802054691 510712.2918060654 425990.3207372307 444021.15713094553 1.5423152137469744 1.606482059260067 1.0133718984638767 0.8626972635739106 2.5214006884370836 2.332670081366938 1.3482251252926785 1.1501981011581666 0.9593919431447331 1.0 18.760268895518234 -7.148476875840045 3.60899135221683 1.035960888780436 1.6312957469321618 0.240119416380828 0.48034012159597045 0.4232971632612919 9.978243655996796 0.28067549881379705 0.1510738151526494 7.104329962466056e-08 7.148476875840045 0.5953348581517259 YKEETIEK ddPTM_KYSE-520_SHP099_60min_R1 5 YKEETIEK 8 1 P61254 P61254 RPL26 60S ribosomal protein L26 0 ;;;; 142.43 0.00063382 12341620000.0 14848730.0 12117550.0 8641530.0 7555360.0 11623120.0 11619230.0 9163560.0 10695180.0 10562190.0 10544930.0 False True 14025041.346690586 11535404.70918664 9198576.850736855 8273419.142798181 12537793.417493634 11546710.07563546 10089902.072527288 10658080.91685379 8644362.547142291 10451510.124031387 1.3419153003011977 1.1037069832294406 0.8801194029929096 0.7916003567537025 1.1996154879729015 1.1047886801626738 0.9654013585393132 1.0197646837988923 0.827092204337641 1.0 23.317208074560632 -4.374908321908979 3.1873031794691062 0.9805087289623999 1.3558436826103304 0.47925277555223267 0.11687235524230558 0.25995288266230754 4.2531216628773 0.03164703800625992 0.20333807139178875 4.21785531525542e-05 4.374908321908979 0.37533495364793046 YKELGEK ddPTM_KYSE-520_SHP099_60min_R1 2 YKELGEK 7 1 P30101 P30101 PDIA3 Protein disulfide-isomerase A3 0 ; 75.378 0.023293 1932180000.0 1187930.0 1024620.0 785200.0 659400.0 1005950.0 954300.0 788230.0 858220.0 908170.0 787300.0 False True 1122033.1548202564 975395.7172140249 835815.2483644194 722069.1777441605 1085112.5419274454 948343.8597203881 867911.9807834711 855243.0351300535 743269.2211026518 780325.1345101318 1.4379046697305735 1.2499862865834168 1.0711115295409817 0.9253439954839557 1.3905902731284587 1.2153188687376246 1.1122440408488496 1.0960085704107856 0.9525122134752936 1.0 19.573715844833746 -4.444773113572047 2.8491071804504458 1.1088662289135096 1.4432090748807285 0.41049980353998794 0.1278622355993613 0.3338371375223286 4.59148968634812 0.034914718811023725 0.20781413798195014 3.591094935353212e-05 4.444773113572047 0.33434284596721886 YKETDLLILFK ddPTM_KYSE-520_SHP099_60min_R1 1 YKETDLLILFK 11 1 P05455 P05455 SSB Lupus La protein 0 110.07 0.00033762 179860000.0 378100.0 330180.0 258820.0 267120.0 407870.0 342690.0 245730.0 260170.0 240570.0 182270.0 False True 357126.0392763364 314317.6571897159 275503.95132664155 292507.0044874432 439967.048537151 340551.14459559915 270570.78649369127 259267.5309941343 196888.55227618726 180655.22960391425 1.9768375377747633 1.73987577264636 1.525026161327755 1.6191449598705967 2.4353961382782923 1.885088770152162 1.4977190922560972 1.435150986564724 1.0898580279567023 1.0 17.462879492918375 -7.377973734200806 1.4283972087807735 1.0272343687087717 1.8479334004624401 0.6347991711816339 0.24176044096833352 0.3124546929351591 1.1202020391078837 0.22805500219835215 0.08130661434893185 4.188188941994161e-08 7.377973734200806 0.8206990317536684 YKHDYVSH ddPTM_KYSE-520_SHP099_60min_R1 1 YKHDYVSH 8 1 Q12888;Q12888-2;A6NNK5;Q12888-3 Q12888 TP53BP1 Tumor suppressor p53-binding protein 1 0 122.78 0.00090287 504230000.0 308240.0 259470.0 261080.0 216330.0 365930.0 290580.0 240250.0 292140.0 297530.0 186550.0 False True 291141.3127387939 247004.67172758986 277909.63454277 236889.93815801368 394726.60914310836 288766.3824348218 264536.8146140454 291126.6345259885 243506.05212093794 184897.3121337039 1.5746108441439228 1.3359019061833335 1.5030485372432376 1.2811973058143356 2.1348423326871924 1.5617662534001984 1.4307228783442354 1.5745314583884675 1.3169799458461169 1.0 17.49636472676377 -9.369550607479178 9.040455954129238 0.9999924137310038 1.5283180898672932 0.31917258287346206 0.22938809640712368 0.0 0.0 0.22442180625867608 0.05443028305273084 4.2702115660848865e-10 9.369550607479178 0.5283256761362894 YKLDEDEDEDDADLS(ph)KYNLDAS(ph)EEEDSNK ddPTM_KYSE-520_SHP099_60min_R1 1 YKLDEDEDEDDADLSKYNLDASEEEDSNK 29 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 2 YKLDEDEDEDDADLS(0.9)KY(0.107)NLDAS(0.984)EEEDS(0.009)NK 85.751 0.0030632 712830000.0 181350.0 151820.0 145120.0 144350.0 151330.0 132780.0 139540.0 191310.0 196170.0 158760.0 True False 171290.15398773758 144526.33931353403 154474.66740020964 158068.98059958988 163238.81005008216 131951.2707677597 153646.06497916268 190646.39026208958 160550.47304327073 157353.50991341117 1.0885690067034126 0.9184818272758218 0.981704618379433 1.0045469000759655 1.0374017722255422 0.8385657926561036 0.9764387528674218 1.2115801571061167 1.0203170754285609 1.0 17.26364983405946 -7.063451251886121 24.999711230868144 1.0883712927376998 0.9735393600293546 0.2313435450001079 0.0819810028180759 272.4047684169953 107325.79866586938 0.03725126284683664 0.021507045800281 8.640696441903841e-08 7.063451251886121 -0.11483193270834524 YKLDEDEDEDDADLSKYNLDAS(ph)EEEDSNK ddPTM_KYSE-520_SHP099_60min_R1 3 YKLDEDEDEDDADLSKYNLDASEEEDSNK 29 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YKLDEDEDEDDADLSKYNLDAS(1)EEEDSNK;YKLDEDEDEDDADLSKYNLDAS(1)EEEDSNK;YKLDEDEDEDDADLSKYNLDAS(1)EEEDSNK 364.48 1.8430999999999996e-93 12450700000.0 3419110.0 3393890.0 3002040.0 3071200.0 3419910.0 2909450.0 3060050.0 3208380.0 3880240.0 2802490.0 True False 3229445.152473194 3230842.4300672556 3195556.3018338303 3363085.9246100467 3689037.4603738594 2891291.0433443207 3369389.717210026 3197250.8786215205 3175686.2288903566 2777662.118904228 1.1626486643188956 1.1631517051979687 1.150448170094374 1.2107613455652284 1.3281087844583357 1.040908116097619 1.2130308053951613 1.1510582431396725 1.1432946459820488 1.0 21.405439686631993 -8.743676689936027 0.6611140763366298 0.9942368345385163 1.1846827564868696 0.3915077049508705 0.06699693377532087 2.8935478197063684 1.76114821719576 0.1062737041850152 0.02597749503784698 1.8043604952382472e-09 8.743676689936027 0.1904459219483533 YKLDEDEDEDDADLSKYNLDAS(ph)EEEDSNKK ddPTM_KYSE-520_SHP099_60min_R1 5 YKLDEDEDEDDADLSKYNLDASEEEDSNKK 30 3 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YKLDEDEDEDDADLSKYNLDAS(1)EEEDSNKK;YKLDEDEDEDDADLS(0.106)KY(0.086)NLDAS(0.764)EEEDS(0.044)NKK;YKLDEDEDEDDADLSKYNLDAS(1)EEEDSNKK;YKLDEDEDEDDADLS(0.068)KY(0.063)NLDAS(0.867)EEEDS(0.001)NKK;YKLDEDEDEDDADLS(0.021)KY(0.019)NLDAS(0.924)EEEDS(0.037)NKK 281.4 4.2827e-52 18319400000.0 3903640.0 4129450.0 3522930.0 3490460.0 3444130.0 2975010.0 3008745.0 3344130.0 4508130.0 3016280.0 True False 3687097.3074865895 3931065.023569187 3750023.704687297 3822192.2689549327 3715163.4365809117 2956441.859066073 3312898.3071214817 3332529.9935558126 3689567.232709186 2989558.105830327 1.2333251861858447 1.3149318007576787 1.254373914784893 1.278514126051197 1.2427132389015911 0.9889226950633039 1.108156520075849 1.114723271996825 1.234151370235514 1.0 21.51150082109154 -6.106167766032846 6.797278392743174 1.097960367043605 1.2709317002037586 0.6362550703725172 0.06645030544478718 0.1699047322664402 9.47385910725566 0.021843942277045236 0.021903377139086258 7.831270658145001e-07 6.106167766032846 0.17297133316015367 YKPS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 1 YKPSPER 7 1 O60292 O60292 SIPA1L3 Signal-induced proliferation-associated 1-like protein 3 1 YKPS(1)PER 75.294 0.013988999999999998 574040000.0 957140.0 856200.0 758050.0 775620.0 771510.0 854450.0 680880.0 732680.0 887070.0 825400.0 True False 904045.5361887136 815066.8668175989 806915.1159228832 849334.6916013428 832223.4477085767 849117.060607866 749709.9951484338 730138.5040887981 726000.4492149377 818087.5981514821 1.1050718018846133 0.9963075698241745 0.9863431712522671 1.0381952904804637 1.017279139286594 1.0379292664092414 0.9164177489579948 0.8924942826887852 0.8874360775733299 1.0 19.64189580495402 -6.765482878905846 24.78758101067742 0.915128186559903 1.026432001111928 0.6027741576253322 0.041877424828637204 60.57735481666197 371346.6646515118 0.016598957779479055 0.011655799763498944 1.7159993582461622e-07 6.765482878905846 0.11130381455202487 YKPVCNQVECHPYFNQR ddPTM_KYSE-520_SHP099_60min_R1 2 YKPVCNQVECHPYFNQR 17 1 H0Y804;Q04828;B4DK69;P52895;S4R3P0 H0Y804 AKR1C1;AKR1C2 Aldo-keto reductase family 1 member C1;Aldo-keto reductase family 1 member C2 0 ; 155.22 2.2150999999999998e-06 3177600000.0 2001650.0 1585600.0 1196400.0 1081890.0 1996660.0 1687930.0 1443780.0 1307410.0 1416040.0 1181990.0 False True 1890614.4843096503 1509425.3959658765 1273521.858307681 1184712.5003179119 2153785.7825586284 1677395.0027641577 1589731.372334926 1302874.8998617886 1158922.831463493 1171518.4881743058 1.6138153203676568 1.2884349766585117 1.087069364387358 1.0112623166230759 1.8384565026498965 1.4318126599762073 1.3569835972562099 1.1121249156658113 0.989248435395636 1.0 20.159948291418452 -7.382679510744246 2.8910149989319773 1.0019429462320586 1.3685275955379497 0.3366855051245554 0.22340206882921995 0.3676050674453578 5.7868031931572 0.16407430820050023 0.066019154137917 4.143053002006596e-08 7.382679510744246 0.3665846493058911 YKVDYESQSTDTQNFS(ph)SESKR ddPTM_KYSE-520_SHP099_60min_R1 2 YKVDYESQSTDTQNFSSESKR 21 2 C9JMX4;H0Y485;H0Y5K2;B3KWK7;A6XND1;A6XND0;P17936;P17936-2 C9JMX4 IGFBP3 Insulin-like growth factor-binding protein 3 1 YKVDYESQSTDT(0.001)QNFS(0.707)S(0.238)ES(0.055)KR;YKVDYESQSTDT(0.001)QNFS(0.941)S(0.047)ES(0.011)KR 135.8 1.3354e-06 2355020000.0 512770.0 513570.0 524200.0 555070.0 542070.0 435500.0 530750.0 559210.0 773140.0 472810.0 True False 484325.62591834745 488897.3263157134 557990.770749655 607823.6859121197 584727.8250436003 432781.88295947685 584403.3896208303 557270.2310305948 632757.2652733567 468621.27124061337 1.0335118263756122 1.0432674663303734 1.1907073045840355 1.2970467266733032 1.2477620221882162 0.9235216357416802 1.2470697031607185 1.1891697309328169 1.3502529742156493 1.0 18.838062915656334 -4.75518300543859 8.749323771721498 1.1872505802832025 1.0378849306861846 0.17557157980096672 0.122694762222331 0.20120185855673048 140.13856648655275 0.03168242484088454 0.07633379655794818 1.757183006322606e-05 4.75518300543859 -0.14936564959701792 YKVDYESQSTDTQNFSS(ph)ESKR ddPTM_KYSE-520_SHP099_60min_R1 1 YKVDYESQSTDTQNFSSESKR 21 2 C9JMX4;H0Y485;H0Y5K2;B3KWK7;A6XND1;A6XND0;P17936;P17936-2 C9JMX4 IGFBP3 Insulin-like growth factor-binding protein 3 1 YKVDYESQSTDT(0.003)QNFS(0.073)S(0.462)ES(0.462)KR 91.11399999999999 0.0013172000000000001 1182200000.0 494930.0 554960.0 547990.0 533940.0 528590.0 462630.0 545610.0 599890.0 814340.0 526370.0 True False 467475.2462815052 528298.8885880575 583314.312215001 584685.4970650846 570187.0257343086 459742.55456611497 600765.5834404539 597809.1216053787 666476.3838408386 521706.7713096636 0.8960497965322195 1.0126356751357575 1.1180884441094778 1.1207167114149634 1.092926251087259 0.8812278847982036 1.1515387886040378 1.145871885282746 1.2774923012169335 1.0 18.992879632877177 -6.945459414333412 24.999987321471213 1.156752010802195 1.0309193009448907 0.2611696910617496 0.09985303120637079 124.44979719191949 57044.08548726324 0.04235270240203699 0.028554183340346706 1.1338107899848766e-07 6.945459414333412 -0.12583270985730421 YKYEDKDGK ddPTM_KYSE-520_SHP099_60min_R1 1 YKYEDKDGK 9 2 H3BLU7;O43488;A0A499FJT0;Q8NHP1 H3BLU7 AKR7A2;AKR7L Aflatoxin B1 aldehyde reductase member 2;Aflatoxin B1 aldehyde reductase member 4 0 76.22800000000001 0.010431000000000001 3279000000.0 7664700.0 6545500.0 4822600.0 4332100.0 6293200.0 7479900.0 5932800.0 6338500.0 6625500.0 5082800.0 False True 7239523.811799347 6231044.355004204 5133472.512432819 4743821.481506642 6788439.0365900835 7433215.169571969 6532545.322548211 6316513.222917028 5422476.215263246 5037770.3463585675 1.4370491932075198 1.2368655033090514 1.0189969290965055 0.941650999421917 1.347508633754404 1.4754970271610122 1.296713600148547 1.2538311174670296 1.0763643124746156 1.0 22.264353925671568 -7.879844019468789 3.5950178198673703 1.0032122353219433 1.245007316503689 0.23218859608877596 0.15712446521410098 0.3729847321859475 8.66400478901638 0.1680197023892207 0.044847280185159724 1.3187302866323144e-08 7.879844019468789 0.24179508118174575 YKYEDKDGKQPVGR ddPTM_KYSE-520_SHP099_60min_R1 2 YKYEDKDGKQPVGR 14 3 H3BLU7;O43488;A0A499FJT0;Q8NHP1 H3BLU7 AKR7A2;AKR7L Aflatoxin B1 aldehyde reductase member 2;Aflatoxin B1 aldehyde reductase member 4 0 ; 73.722 0.0089553 1431610000.0 2262290.0 2225540.0 1813820.0 1394480.0 1894390.0 1846410.0 1323550.0 1459950.0 2181820.0 1197910.0 False True 2136796.263936692 2118621.7177963564 1930741.7394146088 1527010.9599343017 2043467.7153953305 1834885.8702989845 1457347.3506032042 1454885.7742048902 1785656.487206348 1187297.4493598777 1.799714355563325 1.78440686362006 1.62616515385892 1.2861233389809588 1.7211084859123131 1.5454306511719107 1.2274492389324358 1.2253759788579355 1.5039672561994224 1.0 20.179249982785784 -1.0000000000000338 0.0944366506398567 0.7193538936860188 3.8387303275479243 0.6584996069970175 0.15184820109364427 90.10386792058358 0.6092925748353702 2.4743978624646177 36.39009135127447 0.09999999999999223 1.0000000000000338 3.1193764338619054 YLAADKDGNVTCER ddPTM_KYSE-520_SHP099_60min_R1 3 YLAADKDGNVTCER 14 1 Q16658 Q16658 FSCN1 Fascin 0 ;; 97.45 0.0018248000000000001 2763140000.0 1978750.0 2105520.0 1354990.0 1333050.0 1731290.0 1887930.0 1488090.0 1699640.0 1823620.0 1617310.0 False True 1868984.7929596675 2004367.6587500488 1442334.8234606541 1459742.6712039036 1867532.6733073862 1876146.7285779235 1638520.6595588534 1693744.3455389584 1492496.5777191687 1602981.891648139 1.1659425491313766 1.2503994394404647 0.8997823562296687 0.9106420221023451 1.165036662633315 1.1704104321783226 1.0221704113414372 1.0566210101085423 0.9310751328479622 1.0 20.612326697263928 -4.743285546072061 24.999983338503476 1.028289079154406 1.2081710830567343 0.4017600018825028 0.09160278159573582 271.99621306708536 374565.2028829645 0.02522597286317221 0.06645710475152423 1.805986310166956e-05 4.743285546072061 0.17988200390232834 YLAEKYEWDVAEAR ddPTM_KYSE-520_SHP099_60min_R1 4 YLAEKYEWDVAEAR 14 1 P13639 P13639 EEF2 Elongation factor 2 0 ;;; 167.71 3.1699000000000005e-08 1458490000.0 3191960.0 3003910.0 2106280.0 1912640.0 2737820.0 2491050.0 1971320.0 1803170.0 2374090.0 1824570.0 False True 3014895.6157854963 2859597.6546391645 2242054.178967154 2094416.7305438134 2953270.8579350817 2475502.4329419225 2170600.2638291754 1796915.2241330398 1943015.1019386172 1808405.729293981 1.66715663799768 1.5812810191414173 1.2397959941447838 1.1581564339333816 1.6330797951453444 1.3688866346980566 1.2002838902067616 0.9936460579753708 1.0744353827595916 1.0 20.78628696276995 -1.0000000000000226 0.1435972642862567 0.8620508717018652 3.616987201041874 0.5950373015636401 0.15553103370699276 56.87613516625378 0.5420742624966001 0.6955647099336935 32.334586377194675 0.09999999999999479 1.0000000000000226 2.754936329340009 YLAEVAAGDDKK ddPTM_KYSE-520_SHP099_60min_R1 7 YLAEVAAGDDKK 12 1 P63104;E7EX29;B0AZS6;B7Z2E6;H0YB80;P63104-2 P63104 YWHAZ 14-3-3 protein zeta/delta 0 ;;;;;; 172.99 4.2881e-06 8137420000.0 8926310.0 8744560.0 5226080.0 4620330.0 7212310.0 7534260.0 5311410.0 6482740.0 6520720.0 6637700.0 False True 8431149.79014218 8324458.211747847 5562961.478823644 5059444.774047134 7779877.764569544 7487235.888648158 5848339.157166222 6460252.888022886 5336721.621974396 6578895.142052463 1.2815449415282605 1.2653276928731847 0.8455768573153043 0.7690417106220521 1.182550807785394 1.1380688895297264 0.8889546087736664 0.9819662342281132 0.8111881260824385 1.0 22.649413887795326 -4.747449803391266 24.8634143097573 0.9575937223288371 1.2734366184593298 0.5076327750167549 0.1264699083174091 190.37976530225697 338352.2441039687 0.03442292432871889 0.09007450788128257 1.7887522646581426e-05 4.747449803391266 0.31584289613049266 YLAEVACGDDRK ddPTM_KYSE-520_SHP099_60min_R1 2 YLAEVACGDDRK 12 1 P27348;E9PG15 P27348 YWHAQ 14-3-3 protein theta 0 ; 142.91 7.6216e-05 2526200000.0 968250.0 1385650.0 653260.0 689620.0 1167270.0 1641300.0 1296480.0 1612330.0 1640000.0 1669660.0 False True 914539.242341478 1319081.2940969463 695370.1848529555 755161.277458186 1259127.5081422026 1631056.0378906764 1427540.850825461 1606737.2035506505 1342217.3410356531 1654868.1113758255 0.5526357273155428 0.7970914932914427 0.4201967395908295 0.4563271672631117 0.7608627536459013 0.9856108935077901 0.8626311915809599 0.9709155626999424 0.8110720919746043 1.0 20.658284811948175 -5.983270166408337 4.600744728024234 0.9175043228727896 0.5654481387540431 0.7220484690714749 0.10780880213263948 0.1110859831594323 5.978544552815106 0.03578204077212138 0.03930814547740096 1.0392734522771576e-06 5.983270166408337 -0.3520561841187465 YLAEVATGDDK ddPTM_KYSE-520_SHP099_60min_R1 3 YLAEVATGDDK 11 0 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 ;; 244.8 1.7167000000000001e-13 4531140000.0 2979000.0 3828510.0 3422900.0 1843230.0 3360150.0 3791190.0 2752320.0 3375640.0 3660560.0 3774190.0 False True 2813748.931510731 3644582.6328893322 3643545.61083364 2018410.0250126943 3624574.6883617514 3767527.7769394764 3030551.3656546497 3363930.6927203005 2995894.5792082124 3740753.6128753903 0.7521877200962984 0.9742910146086486 0.9740137918447321 0.5395731004751235 0.9689423745756043 1.0071574251701398 0.8101446070181478 0.8992655065925502 0.8008799534127483 1.0 21.834897514312377 YLAEVATGDDKKR ddPTM_KYSE-520_SHP099_60min_R1 4 YLAEVATGDDKKR 13 2 P31947;P31947-2 P31947 SFN 14-3-3 protein sigma 0 ;;; 204.13 3.3434000000000003e-09 7230420000.0 7164120.0 6653240.0 5205340.0 3594690.0 5745230.0 5449050.0 3914760.0 4322990.0 6153280.0 4667760.0 False True 6766711.982280846 6333608.363683161 5540884.545238471 3936328.256817043 6197346.915112892 5415040.45772753 4310502.145175776 4307994.556683452 5035999.463565774 4626407.277862328 1.4626278180609003 1.3690122774079805 1.1976646698944942 0.8508391113019037 1.3395593044234597 1.1704634141569994 0.9317169644362745 0.9311749480633703 1.0885335339288809 1.0 22.1414608460826 -1.0000000000731952 0.41162848405340896 1.0069798120280538 9.7787123682567 0.5307401790325189 0.13582239840582444 61.310462703800056 0.7992447007273172 0.09902928729695791 439.9941477553768 0.09999999998314618 1.0000000000731952 8.771732556228647 YLAFLR ddPTM_KYSE-520_SHP099_60min_R1 3 YLAFLR 6 0 M0QYS1;P40429 M0QYS1 RPL13A 60S ribosomal protein L13a 0 ;; 136.94 0.046130000000000004 1760717000.0 982093.0 1074021.0 939894.0 806243.0 1295670.0 1077761.0 913240.0 820031.0 867551.0 686583.0 False True 927614.3435361424 1022423.4190216127 1000481.0711235714 882868.0923142037 1397631.8576461396 1071034.293823857 1005559.2115634987 817186.5038576736 710025.6075809897 680500.408773491 1.363135615462804 1.502458199642218 1.4702137694917798 1.297380693577323 2.0538295636958983 1.5738922122827963 1.477676131563068 1.200861150591431 1.0433874813693556 1.0 19.37623650278667 -7.386025930770293 2.1464858596368503 1.0199697695916456 1.5496837346860957 0.5560284667419648 0.19055609617512625 0.2660037425957755 2.2652542910820457 0.15448713341716006 0.057010929833911206 4.111251729899611e-08 7.386025930770293 0.52971396509445 YLCIPAADS(ph)PSQNLTR ddPTM_KYSE-520_SHP099_60min_R1 1 YLCIPAADSPSQNLTR 16 0 S4R3A4;Q9NRW4;Q9NRW4-2 S4R3A4 DUSP22 Dual specificity protein phosphatase 22 1 YLCIPAADS(0.994)PS(0.006)QNLTR 156.11 9.1838e-06 0.0 145870.0 153130.0 126800.0 111410.0 121270.0 145170.0 97191.0 143490.0 194940.0 144110.0 True False 137778.30031536418 145773.40494718397 134973.7308871732 121998.3729033621 130813.25906808607 144263.9401819226 107016.01477275205 142992.26668081776 159543.8100374941 142833.2975158833 0.9646091122417936 1.020584187877996 0.9449738487775505 0.8541311796697523 0.9158456840467427 1.0100161705353068 0.7492371641203038 1.0011129699285755 1.1169931158366806 1.0 17.123972816277487 -7.517798940998239 24.903740982753636 1.0586821007974712 0.9240747593612334 0.33447260130927425 0.07819947046423709 248.66834596869106 1219132.0560360488 0.05001621475901166 0.020072920917681612 3.035296065857574e-08 7.517798940998239 -0.13460734143623776 YLDELMK ddPTM_KYSE-520_SHP099_60min_R1 1 YLDELMK 7 0 P46940;A0A0J9YXZ5 P46940 IQGAP1 Ras GTPase-activating-like protein IQGAP1 0 91.906 0.053267999999999996 43586000.0 211130.0 213530.0 141170.0 147560.0 192290.0 231180.0 164160.0 200870.0 192130.0 173030.0 False True 199418.1980227793 203271.69828493573 150270.04407998605 161584.0580344681 207422.12901956207 229737.1198681334 180754.8948472078 200173.22885341063 157244.0352031586 171497.08881530288 1.1628080651418322 1.1852778358462581 0.8762250433406615 0.9421970900537512 1.2094790089582765 1.3395977824180634 1.0539822926199947 1.1672106520069916 0.9168904049007246 1.0 17.38782456111261 -7.76407157425619 24.994631538626013 0.9584451608501464 1.1139030817025724 0.1973928704423944 0.12783526060494688 129.2439594347482 1227148.5880675854 0.11548195797308353 0.03512032902073605 1.721584824414105e-08 7.76407157425619 0.15545792085242593 YLDIHER ddPTM_KYSE-520_SHP099_60min_R1 2 YLDIHER 7 0 P62072 P62072 TIMM10 Mitochondrial import inner membrane translocase subunit Tim10 0 ; 166.61 0.0012959000000000002 415180000.0 1040300.0 899360.0 651520.0 570920.0 983440.0 945520.0 731780.0 755530.0 735670.0 750470.0 False True 982592.4852133649 856153.3956331173 693518.0216688573 625180.0651466424 1060831.132991826 939618.6589571637 805755.4638845627 752909.2427720277 602090.8727315245 743821.4196568257 1.3210059017481646 1.1510200876281806 0.9323716732825781 0.8404975288760568 1.4261906217775469 1.2632315151540974 1.0832646688990366 1.0122177486087922 0.8094562173395182 1.0 19.504596767946992 -7.3675467082764925 2.741563135832455 0.9076912662402108 1.143080921576273 0.25026098195959 0.16873450414812438 0.44992248851627054 6.4102142269068 0.12564231065052017 0.05047836193185821 4.2899604832658666e-08 7.3675467082764925 0.23538965533606215 YLEEDNS(ph)DES(ph)DAEGEHGDGAEEEAPPAGPRPGPEPAGLGR ddPTM_KYSE-520_SHP099_60min_R1 1 YLEEDNSDESDAEGEHGDGAEEEAPPAGPRPGPEPAGLGR 40 1 Q9H1C4 Q9H1C4 UNC93B1 Protein unc-93 homolog B1 2 Y(0.004)LEEDNS(0.998)DES(0.998)DAEGEHGDGAEEEAPPAGPRPGPEPAGLGR 83.49700000000001 0.0026344999999999997 560850000.0 40817.0 42116.0 46093.0 57531.0 56322.0 41083.0 43446.0 64166.0 69135.0 37263.0 True False 38552.799643327766 40092.684142595164 49064.228531407534 62998.72894267409 60754.22097165619 40826.585758034926 47837.94567209909 63943.42312245695 56581.826751524284 36932.878810175316 1.0438612121594526 1.0855553488982097 1.3284701900326799 1.7057627504877149 1.6449901261127227 1.1054265758126296 1.295267176923109 1.731341427542334 1.5320177731700546 1.0 15.17261810034623 -4.843597806184638 3.6688522038267997 1.4546267737049483 1.0571876716478994 0.27370447257810415 0.23206495879197156 0.2739884065853375 7.113344239784735 0.06347484110793931 0.15382883028733638 1.4335148420334363e-05 4.843597806184638 -0.3974391020570489 YLEES(ph)DEDDLF ddPTM_KYSE-520_SHP099_60min_R1 9 YLEESDEDDLF 11 0 P11388;P11388-2;P11388-3;P11388-4;J3QR57 P11388 TOP2A DNA topoisomerase 2-alpha 1 YLEES(1)DEDDLF;YLEES(1)DEDDLF;YLEES(1)DEDDLF;YLEES(1)DEDDLF;YLEES(1)DEDDLF;YLEES(1)DEDDLF;YLEES(1)DEDDLF;YLEES(1)DEDDLF;Y(0.03)LEES(0.97)DEDDLF 161.02 3.0271e-05 3758569000.0 2872510.0 3221670.0 2636840.0 2619130.0 2700840.0 2837450.0 2662840.0 2648880.0 3243760.0 2815000.0 True False 2713166.144093284 3066896.1373747448 2806814.9254931686 2868051.3277298547 2913380.7423225027 2819740.422051364 2932025.8540140004 2639691.653533239 2654774.95253525 2790061.290036859 0.9724396212304859 1.099221779939547 1.0060047553493308 1.0279528044675912 1.0441995495676062 1.010637448044775 1.0508822384956518 0.946105256884291 0.951511338483958 1.0 21.411865383801942 -7.263310065928592 24.99155332875924 0.9616062202540524 1.0316165747680095 0.42780539225671255 0.03395240073564176 138.2004964825466 1846263.2474022438 0.016190027858115703 0.008408240325438097 5.4536835458934333e-08 7.263310065928592 0.0700103545139571 YLFTGLK ddPTM_KYSE-520_SHP099_60min_R1 2 YLFTGLK 7 0 P54578-2;P54578;A6NJA2;P54578-3 P54578-2 USP14 Ubiquitin carboxyl-terminal hydrolase 14;Ubiquitin carboxyl-terminal hydrolase 0 ; 100.67 0.03815 550740000.0 901000.0 918980.0 667310.0 511030.0 877240.0 883810.0 654900.0 699950.0 675270.0 661260.0 False True 851019.7339010289 874830.8213828981 710325.8703337508 559598.1375532277 946273.7971871686 878293.8139573256 721103.6832080679 697522.0368195582 552657.9901714309 655401.7508524947 1.2984703394430817 1.3348008610672575 1.0838022165943486 0.8538245996830902 1.4438072464047136 1.3400846317772428 1.1002468062834945 1.0642663616816355 0.8432354497872139 1.0 19.322020001365146 -7.318761287704491 2.226822011441599 0.9323267674306374 1.2146530262016968 0.3409396039107325 0.16140677187301347 0.41220314116623236 3.8438231083506977 0.12450569180943324 0.04945553635897833 4.799972091864751e-08 7.318761287704491 0.28232625877105944 YLGDAFGS(ph)PQTDHGFETDPDPFLLDEPAPR ddPTM_KYSE-520_SHP099_60min_R1 6 YLGDAFGSPQTDHGFETDPDPFLLDEPAPR 30 0 Q9H8N7 Q9H8N7 ZNF395 Zinc finger protein 395 1 Y(0.002)LGDAFGS(0.499)PQT(0.499)DHGFETDPDPFLLDEPAPR;YLGDAFGS(0.96)PQT(0.04)DHGFETDPDPFLLDEPAPR;YLGDAFGS(0.995)PQT(0.005)DHGFETDPDPFLLDEPAPR;YLGDAFGS(0.979)PQT(0.021)DHGFETDPDPFLLDEPAPR;YLGDAFGS(0.908)PQT(0.092)DHGFETDPDPFLLDEPAPR;Y(0.003)LGDAFGS(0.955)PQT(0.022)DHGFET(0.02)DPDPFLLDEPAPR 226.59 5.6137e-23 812320000.0 681087.0 682929.0 596228.0 578970.0 643058.0 678572.0 575932.0 683649.0 827262.0 625485.0 True False 643305.7463967256 650120.0657426715 634661.8108785291 633995.1347263219 693663.0061004818 674336.7804444976 634152.827114656 681277.5811838759 677052.0743779499 619943.689519966 1.0376841594997914 1.048675995469962 1.0237410616599059 1.022665679873661 1.1189129235876214 1.0877387605423472 1.0229200455378333 1.098934617289841 1.0921186646842136 1.0 19.241777653581952 -5.716438049533834 24.999972552196553 1.0735736295921672 1.0336226605405914 0.2148557576598732 0.034180518069631745 191.5676807600194 106422.22732141566 0.009910174940320976 0.012793942635906358 1.9211529874186894e-06 5.716438049533834 -0.0399509690515758 YLGDAFGSPQT(ph)DHGFETDPDPFLLDEPAPR ddPTM_KYSE-520_SHP099_60min_R1 3 YLGDAFGSPQTDHGFETDPDPFLLDEPAPR 30 0 Q9H8N7 Q9H8N7 ZNF395 Zinc finger protein 395 1 YLGDAFGS(0.254)PQT(0.745)DHGFETDPDPFLLDEPAPR;YLGDAFGS(0.42)PQT(0.58)DHGFETDPDPFLLDEPAPR;YLGDAFGS(0.339)PQT(0.661)DHGFETDPDPFLLDEPAPR 233.11 1.0162e-30 437826000.0 481334.0 501356.0 480571.0 427436.0 488746.0 519824.0 439509.0 500537.0 637806.0 469393.0 True False 454633.44350445975 477270.10520930187 511549.37560078653 468059.3889266811 527207.5296156579 516579.5855970776 483938.8589144818 498800.75397321343 521996.5081808458 465234.5432022277 0.9772134295428707 1.0258698804354314 1.0995515768880189 1.006071874424908 1.1332080502596984 1.110363779184237 1.0402040561810213 1.0721490079819702 1.122007202190799 1.0 18.827598693897112 -4.502487207485737 3.2094343591556185 1.0754512715267124 0.9798329565961599 0.3218497341662744 0.04384966691122024 0.2864624509340635 5.64874336435072 0.011041394713926416 0.050502353570835636 3.144219034547331e-05 4.502487207485737 -0.0956183149305525 YLGQDYEQLR ddPTM_KYSE-520_SHP099_60min_R1 1 YLGQDYEQLR 10 0 P07384;E9PIA9;E9PLX0;E9PJJ3;E9PLC9;E9PMC6;E9PJA6;E9PSA6;E9PQB3;E9PRM1 P07384 CAPN1 Calpain-1 catalytic subunit 0 98.943 0.017418 199410000.0 230250.0 238430.0 169010.0 117060.0 201110.0 213940.0 175140.0 219030.0 212070.0 209100.0 False True 217477.5735080043 226975.46490927367 179904.65502556102 128185.34720462777 216936.21284062692 212604.72110298657 192844.86040168125 218270.23605198643 173563.433849653 207247.53667733812 1.0493614399219289 1.0951901699205708 0.8680665541788948 0.6185132487446566 1.0467492946773742 1.0258492067579505 0.930504957952382 1.0531861538687886 0.8374692246396751 1.0 17.660995428536566 YLGS(ph)PITTVPK ddPTM_KYSE-520_SHP099_60min_R1 2 YLGSPITTVPK 11 0 P30307-4;P30307-3;P30307-2;P30307;D6RJC2;A0A3B3IT42 P30307-4 CDC25C M-phase inducer phosphatase 3 1 YLGS(0.998)PIT(0.002)TVPK;YLGS(1)PITTVPK 167.18 1.5382e-05 834300000.0 1668310.0 1637580.0 1593020.0 1343300.0 1335940.0 1863130.0 1658150.0 1963340.0 2289460.0 1894190.0 True False 1575765.518606466 1558908.1987423059 1695708.6181221185 1470966.828122129 1441070.87754118 1851501.5145770167 1825771.983984514 1956529.6317870033 1873751.7765899333 1877408.9502575204 0.839329927765776 0.8303508931969635 0.9032174997831568 0.7835090100749543 0.767584961893098 0.9862004302914663 0.9724956215501563 1.0421435518982851 0.9980520101030277 1.0 20.840311511579223 -6.328590247604887 6.709979747990882 1.001893622617599 0.8273640697141382 0.8445429351671725 0.03753772810573161 0.10169505538124501 8.496700637271417 0.014204231168371299 0.012529651327713755 4.692559114973009e-07 6.328590247604887 -0.17452955290346073 YLHDESGLNRR ddPTM_KYSE-520_SHP099_60min_R1 4 YLHDESGLNRR 11 1 B5MCX3;Q15019;Q15019-3;Q15019-2;C9J2Q4;C9IY94;C9J938;H7C310;C9JB25 B5MCX3 SEPT2 Septin-2 0 ;;; 193.96 1.2924000000000001e-06 3379350000.0 1862450.0 1812640.0 1179600.0 1129760.0 1483300.0 1370930.0 1048370.0 1150300.0 1253450.0 1036080.0 False True 1759136.1857979726 1725558.0535718887 1255638.9034267308 1237132.0507252715 1600027.2711774735 1362373.517349336 1154349.4707052093 1146309.8777820372 1025855.0769031349 1026901.1372580435 1.7130531089829053 1.680354603734638 1.222745654736975 1.2047236153896677 1.5581122788993589 1.3266842034930904 1.1241096429082444 1.116280658567416 0.9989813426853322 1.0 19.969865865242237 -1.0000000000220415 0.19567099840782587 0.9448528098607051 4.570395669938377 0.704723393247287 0.13775459261221476 32.64153953696059 0.3885178378417735 0.29150584258035045 36.062301624740456 0.09999999999492476 1.0000000000220415 3.625542860077672 YLLGDAPVS(ph)PSSQK ddPTM_KYSE-520_SHP099_60min_R1 11 YLLGDAPVSPSSQK 14 0 Q9NYB0;A0A590UJT3;H3BMI8 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 YLLGDAPVS(0.964)PS(0.028)S(0.008)QK;YLLGDAPVS(1)PSSQK;YLLGDAPVS(0.995)PS(0.004)S(0.001)QK;YLLGDAPVS(0.977)PS(0.022)SQK;YLLGDAPVS(0.977)PS(0.023)SQK;YLLGDAPVS(0.498)PS(0.498)S(0.005)QK;YLLGDAPVS(0.598)PS(0.402)S(0.001)QK;YLLGDAPVS(0.974)PS(0.02)S(0.006)QK;YLLGDAPVS(0.913)PS(0.086)SQK;YLLGDAPVS(0.526)PS(0.471)S(0.003)QK;Y(0.001)LLGDAPVS(0.948)PS(0.041)S(0.009)QK 312.66 1.8113999999999998e-42 74465490000.0 30388400.0 34364200.0 24816060.0 20292340.0 21220640.0 30905200.0 24668450.0 29328500.0 32914200.0 29723300.0 True False 28702694.874226496 32713292.25028418 26415742.934699867 22220917.892485514 22890583.639074724 30712309.183098134 27162177.666871384 29226766.27882339 26937810.97946081 29459974.68637745 0.974294621084616 1.1104317840914877 0.8966655000866222 0.754274846772379 0.7770062222646623 1.0425096935775635 0.9220027496979287 0.992083889750866 0.9143867659844626 1.0 24.812252854943296 -9.010282900921453 15.3858443994148 0.9999999809603773 0.9307630266547349 0.038001788756358956 0.1033054820181816 0.0 0.0 0.10925494880908727 0.02649821729772455 9.766008525527422e-10 9.010282900921453 -0.06923695430564247 YLLGDAPVSPS(ph)SQK ddPTM_KYSE-520_SHP099_60min_R1 1 YLLGDAPVSPSSQK 14 0 Q9NYB0;A0A590UJT3;H3BMI8 Q9NYB0 TERF2IP Telomeric repeat-binding factor 2-interacting protein 1 1 YLLGDAPVS(0.036)PS(0.962)S(0.002)QK 260.15 1.242e-24 687920000.0 1683000.0 1939900.0 1375000.0 1076900.0 1178800.0 1551900.0 1330500.0 1640800.0 1858000.0 1695400.0 True False 1589640.635022678 1846704.2921507366 1463634.7000777852 1179248.2522182085 1271564.8535454774 1542214.016451924 1464999.924428666 1635108.4477655997 1520634.0363684401 1680380.0750012393 0.9460006451347059 1.098980117429311 0.8710140770246313 0.7017747173759715 0.7567126464199116 0.9177769002353748 0.8718265267621585 0.9730586979046355 0.9049345793792031 1.0 20.68035615369892 -9.382182982285517 13.825922420689718 0.9999800267743033 0.891687659004403 0.08565038211608222 0.10416548398882215 0.0 0.0 0.11274273257770451 0.027344129114037708 4.147792459266093e-10 9.382182982285517 -0.10829236776990026 YLLSQSS(ph)PAPLTAAEEELR ddPTM_KYSE-520_SHP099_60min_R1 8 YLLSQSSPAPLTAAEEELR 19 0 Q12792-4;Q12792;Q12792-3;F8VS81 Q12792-4 TWF1 Twinfilin-1 1 YLLSQS(0.095)S(0.905)PAPLTAAEEELR;YLLSQS(0.095)S(0.905)PAPLTAAEEELR;YLLSQS(0.015)S(0.983)PAPLT(0.003)AAEEELR;YLLSQS(0.013)S(0.986)PAPLTAAEEELR;YLLSQS(0.002)S(0.998)PAPLTAAEEELR;YLLSQS(0.002)S(0.998)PAPLTAAEEELR;YLLSQS(0.016)S(0.984)PAPLTAAEEELR;YLLSQSS(1)PAPLTAAEEELR 353.74 7.149399999999999e-66 2737410000.0 2514970.0 3123190.0 2332150.0 2025840.0 2027578.0 3353410.0 2662470.0 3527270.0 4033390.0 3749840.0 True False 2375459.600631598 2973147.2643962377 2482484.1205719365 2218375.2245089957 2187136.853259274 3332480.1243057204 2931618.450803149 3515034.7236410067 3301028.049487679 3716619.3349313713 0.6391452517898129 0.7999601240978687 0.6679414534708533 0.5968798589780674 0.5884748090026444 0.896642842323064 0.7887863099806218 0.9457612972639592 0.888180292897452 1.0 21.825559500803333 -6.2728518664058965 24.52976601359306 0.8932912610460845 0.6634436638897429 0.7336865204553394 0.07375429740597682 337.65597130884623 725748.5438822211 0.027035441791529505 0.024059503313037862 5.335168418250449e-07 6.2728518664058965 -0.22984759715634162 YLMAS(ph)DPNLQVLGAAYIQHK ddPTM_KYSE-520_SHP099_60min_R1 2 YLMASDPNLQVLGAAYIQHK 20 0 Q9Y446;Q9Y446-2;E9PKC4 Q9Y446 PKP3 Plakophilin-3 1 YLMAS(1)DPNLQVLGAAYIQHK;YLMAS(1)DPNLQVLGAAYIQHK 193.51 1.8707e-13 133943000.0 257686.0 277809.0 263849.0 250630.0 273273.0 280536.0 217019.0 244110.0 322082.0 197416.0 True False 243391.64389569423 264462.63864018983 280857.1287133262 274449.79984534264 294778.0303893224 278785.07076445484 238957.3984213339 243263.23938570239 263600.02782649134 195667.04782732413 1.2439071708716483 1.351595179549996 1.4353828701968365 1.4026367898571463 1.5065287367623779 1.4247931568451027 1.2212449723890832 1.2432509310427262 1.34718661498444 1.0 17.578041287432864 -8.57195317311735 0.5453932265006225 0.9861984702528588 1.3903098985858544 0.6201131995375692 0.08527747817799343 1.4429390311168016 0.7314782544977048 0.14798722436769773 0.04393541451446713 2.6794572160432793e-09 8.57195317311735 0.4041114283329956 YLMEEDEDAYKK ddPTM_KYSE-520_SHP099_60min_R1 16 YLMEEDEDAYKK 12 1 P46777;A0A2R8Y6J3 P46777 RPL5 60S ribosomal protein L5 0 ;;;;;;;;;;;;;;; 220.23 1.767e-10 26202980000.0 28577700.0 26400880.0 16257149.0 16121397.0 26904280.0 26561579.0 20684229.0 21935864.0 21588518.0 22247873.0 False True 26992438.01276744 25132542.096271187 17305110.836898103 17653569.723805264 29021493.7715868 26395798.332943555 22775192.72594154 21859773.607653126 17668587.33345142 22050774.153803267 1.2241038715691461 1.13975781172002 0.7847847298328688 0.8005872991429834 1.3161213102616283 1.1970463326518117 1.0328522965717883 0.9913381478211187 0.8012683459643517 1.0 24.394325970708493 -7.460283457696211 3.372082875912886 0.8988520731962288 1.0658323718040776 0.13861353850101388 0.16782100949942413 0.5503070419364927 12.113818611469885 0.1255993618033293 0.049325599979518804 3.4651061418837947e-08 7.460283457696211 0.1669802986078488 YLNFFTK ddPTM_KYSE-520_SHP099_60min_R1 4 YLNFFTK 7 0 P12004 P12004 PCNA Proliferating cell nuclear antigen 0 ;;; 133.79 0.014178999999999999 2284130000.0 2402640.0 2643040.0 1916700.0 1635840.0 2760850.0 2654400.0 1897450.0 1715500.0 1886280.0 1735040.0 False True 2269360.7696559043 2516064.391116079 2040253.5488284298 1791309.741766768 2978113.1879123095 2637832.9050003127 2089262.7633274528 1709549.3309007084 1543779.1012492254 1719668.8954406956 1.3196498324023826 1.4631097868821388 1.1864223131776648 1.041659674438499 1.7317945308007188 1.5339190654630765 1.214921528712097 0.9941153994429877 0.8977188023474744 1.0 20.71369938489734 -7.1431377042891375 3.139375558506097 0.9536354431329531 1.3749313937997811 0.517338820487188 0.17880549728873282 0.23189994616844703 4.301204643084037 0.1046436875332345 0.054755097035436996 7.192208942740403e-08 7.1431377042891375 0.421295950666828 YLPHSAGR ddPTM_KYSE-520_SHP099_60min_R1 1 YLPHSAGR 8 0 M0R0F0;M0R0R2;P46782 M0R0F0 RPS5 40S ribosomal protein S5;40S ribosomal protein S5, N-terminally processed 0 126.52 0.0014561 793360000.0 826130.0 777130.0 542510.0 513940.0 763400.0 715670.0 601740.0 599890.0 657620.0 680440.0 False True 780302.9220506739 739795.5083040891 577481.0626466913 562784.7030783041 823475.2368481646 711203.2380656926 662569.7516164645 597809.1216053787 538212.7852511385 674411.8309743091 1.157012505138568 1.0969491849443411 0.8562736241035631 0.8344822513941673 1.2210272700265452 1.054553323950785 0.9824408783862278 0.8864155315035561 0.7980476624699679 1.0 19.363270319640666 -7.14229850857581 3.3514866662756124 0.8809639197557491 1.0297557757837434 0.2103590999932019 0.12140502755130778 0.4241478165202831 8.811606116363839 0.06874951622863945 0.036556503937578706 7.206120024612591e-08 7.14229850857581 0.14879185602799438 YLQLAEELIRPER ddPTM_KYSE-520_SHP099_60min_R1 1 YLQLAEELIRPER 13 1 Q14566 Q14566 MCM6 DNA replication licensing factor MCM6 0 153.14 4.8813999999999995e-06 358930000.0 126000.0 114740.0 99558.0 71342.0 133380.0 115530.0 85984.0 91669.0 88506.0 82441.0 False True 119010.52882522714 109227.71817174877 105975.66797843222 78122.32223024557 143876.24717161144 114808.93441632233 94676.10184297225 91351.02163470544 72435.54145469613 81710.63687812754 1.4564875929523455 1.3367625360045021 1.2969629417586879 0.9560850975469205 1.7608019306740283 1.4050671834508073 1.1586753629663034 1.1179820048515428 0.886488518780421 1.0 16.318236276432593 -7.183312898434943 1.95730272202711 0.9683663240799749 1.3590423879403015 0.4310386916005402 0.19120687322138163 0.36524547140319713 2.6441810403247326 0.13509710915181847 0.05893541089099343 6.556727001203121e-08 7.183312898434943 0.3906760638603266 YLRGLLR ddPTM_KYSE-520_SHP099_60min_R1 1 YLRGLLR 7 1 A0A1B0GV91;H7C5G6;Q0VF49 A0A1B0GV91 KIAA2012 Uncharacterized protein KIAA2012 0 60.961000000000006 0.044087 361210000.0 555560.0 314780.0 272130.0 185720.0 233410.0 238930.0 175100.0 316490.0 316590.0 327870.0 False True 524741.9793185972 299657.4963055873 289671.93522339466 203370.77296124602 251778.03907876599 237438.74924341653 192800.8168113187 315392.17005932104 259105.23658443763 324965.32687899994 1.6147629790484805 0.9221214434891513 0.8913933618870462 0.625822991377079 0.7747843177512749 0.7306587183432843 0.5932965792473842 0.9705409899830838 0.7973319463738199 1.0 18.30992626824472 -4.089701495717665 1.784597149588066 0.7767990684481159 2.2004370366726196 0.7894855176055958 0.12564703909521313 0.6299328657517004 1.4074903596352308 0.03355171634524963 1.7398555772810134 8.13389392235282e-05 4.089701495717665 1.4236379682245037 YLS(ph)FT(ph)LTK ddPTM_KYSE-520_SHP099_60min_R1 1 YLSFTLTK 8 0 K7ESK5;Q96MN2-2;Q96MN2-3;Q96MN2 K7ESK5 NLRP4 NACHT, LRR and PYD domains-containing protein 4 2 YLS(0.607)FT(0.786)LT(0.607)K 73.985 0.042428 278490000.0 435980.0 429690.0 325780.0 466920.0 495290.0 438910.0 396840.0 531330.0 543090.0 489250.0 True False 411795.3202954172 409047.0474221608 346780.30006643024 511295.9364153828 534266.505185391 436170.59988460207 436956.45998517296 529486.9402433545 444478.5461847885 484915.6256307402 0.8492102512881209 0.8435427233141941 0.7151353384732976 1.054401857540328 1.1017720958990733 0.8994773045666771 0.9010979166052121 1.0919156081114925 0.91661007130188 1.0 18.887374217461154 -5.267517144945135 24.94282238481899 0.9954203140400848 0.8067207646833225 0.5643175605417041 0.07744920246266718 355.64343314740415 1459541.6975051737 0.022383575429450502 0.034166211091975 5.401107920145905e-06 5.267517144945135 -0.18869954935676225 YLS(ph)FT(ph)PPEK ddPTM_KYSE-520_SHP099_60min_R1 5 YLSFTPPEK 9 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 2 YLS(1)FT(1)PPEK;YLS(1)FT(1)PPEK;YLS(1)FT(1)PPEK;YLS(1)FT(1)PPEK;YLS(1)FT(1)PPEK 120.03 0.0017731 738850000.0 3354630.0 3185550.0 2531210.0 3247190.0 3355780.0 3139700.0 3235870.0 3499080.0 3365290.0 3331450.0 True False 3168541.9866108894 3032511.3963919664 2694375.846679197 3555801.961296731 3619860.794223649 3120103.9676874164 3562983.3186478675 3486942.508171413 2754238.168057244 3301935.9448288786 0.9596012883209029 0.9184040656939894 0.815998823629158 1.0768839919094824 1.0962843782274665 0.9449317066776456 1.0790588849029044 1.0560297251169488 0.8341282853686555 1.0 21.654880702605606 -5.2690412722156434 24.95746079264335 1.018260649761472 0.900041658600516 0.2948838571658805 0.0807529414793651 677.6478989653637 2224757.9779044455 0.022713016872000537 0.03440918116961347 5.382186316684353e-06 5.2690412722156434 -0.11821899116095591 YLS(ph)FT(ph)PPEKDGFPSGTPALNAK ddPTM_KYSE-520_SHP099_60min_R1 1 YLSFTPPEKDGFPSGTPALNAK 22 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 2 Y(0.003)LS(0.984)FT(0.94)PPEKDGFPS(0.065)GT(0.009)PALNAK 147.39 5.852e-07 789730000.0 2165700.0 2053000.0 1938200.0 1995500.0 1935800.0 2150700.0 1878900.0 1989200.0 2472900.0 2295500.0 True False 2045564.303784082 1954370.798384173 2063139.4732296455 2185151.7200310472 2088136.4468046627 2137276.683538344 2068837.5482968984 1982299.929482772 2023883.696736015 2275163.655871974 0.8990844673985019 0.8590022934570593 0.9068092609095989 0.9604371599341373 0.9177961512418624 0.9393947015733322 0.9093137291277628 0.8712779515296188 0.8895552157369295 1.0 21.117538893546715 YLS(ph)FTPPEK ddPTM_KYSE-520_SHP099_60min_R1 14 YLSFTPPEK 9 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 YLS(0.999)FT(0.001)PPEK;YLS(0.974)FT(0.026)PPEK;YLS(0.999)FT(0.001)PPEK;YLS(0.976)FT(0.024)PPEK;YLS(0.999)FT(0.001)PPEK;YLS(0.994)FT(0.006)PPEK;YLS(0.998)FT(0.002)PPEK;YLS(0.974)FT(0.026)PPEK;YLS(1)FTPPEK;YLS(1)FTPPEK;YLS(0.998)FT(0.002)PPEK;YLS(0.983)FT(0.017)PPEK;YLS(0.999)FT(0.001)PPEK;YLS(0.982)FT(0.018)PPEK 215.87 6.542399999999999e-09 90346320000.0 41227550.0 35402130.0 33228340.0 34932890.0 32724910.0 37506210.0 37739000.0 44755880.0 41334630.0 43848470.0 True False 38940575.6164166 33701358.53511952 35370291.96362375 38252901.36264361 35300174.23773232 37272119.8311678 41554026.417146556 44600632.29838091 33829303.15322721 43460006.66939348 0.8960094256920659 0.7754568192198082 0.8138584108532391 0.88018627455902 0.8122450257834938 0.8576188244677958 0.9561440414230492 1.026245408512344 0.7784007814488291 1.0 25.373185060127422 -6.667656223373929 4.661720419902921 0.9421921930606819 0.8337809923241035 0.3406876175579666 0.06916555848906408 0.23583232990443811 8.873407359115687 0.026346249632844525 0.01990567174012405 2.1495313159805103e-07 6.667656223373929 -0.1084112007365784 YLS(ph)FTPPEKDGFPS(ph)GTPALNAK ddPTM_KYSE-520_SHP099_60min_R1 1 YLSFTPPEKDGFPSGTPALNAK 22 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 2 Y(0.001)LS(0.999)FT(0.254)PPEKDGFPS(0.443)GT(0.303)PALNAK 146.34 4.9673e-07 1003300000.0 1896500.0 1824500.0 1785800.0 1833000.0 1877600.0 1872100.0 1716400.0 1942300.0 2336600.0 2039800.0 True False 1791297.364420978 1736848.2813696663 1900915.5253810242 2007207.7688884553 2025356.4379173615 1860415.529479766 1889910.4624497257 1935562.614636228 1912332.3408926248 2021728.9589403863 0.8860225088529273 0.8590905688366706 0.940242517165762 0.9928174397523881 1.0017942459403046 0.9202101603445564 0.9347991253190792 0.9573798733390458 0.9458895726036899 1.0 20.947158166069105 -4.866758561118351 4.652919837359406 0.9616619046699701 0.8729473456942957 0.6444901940493457 0.026849191390314886 0.13091234917080727 4.726934904391715 0.00752915518022265 0.0167689556979601 1.3590687885708896e-05 4.866758561118351 -0.08871455897567448 YLS(ph)FTPPEKDGFPSGTPALNAK ddPTM_KYSE-520_SHP099_60min_R1 3 YLSFTPPEKDGFPSGTPALNAK 22 1 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 Y(0.103)LS(0.892)FT(0.005)PPEKDGFPSGTPALNAK;YLS(0.983)FT(0.017)PPEKDGFPSGTPALNAK;YLS(1)FTPPEKDGFPSGTPALNAK 268.45 2.7566999999999997e-36 54858600000.0 16851200.0 16517700.0 14928800.0 12345430.0 12583440.0 14916650.0 12436570.0 15144800.0 19686700.0 16773200.0 True False 15916430.343965642 15724164.898426823 15891134.334924532 13518735.955411142 13573685.138020279 14823549.654299645 13693779.864826618 15092266.22362288 16112091.541321103 16624602.497352138 0.9574021602321445 0.9458370448816006 0.9558805593971689 0.8131764929455799 0.816481785966444 0.8916634040820313 0.8237057016555841 0.9078271932232174 0.9691715362149161 1.0 23.986816509670188 -9.935199169843274 10.270779512496837 0.9999999975542745 0.8940591115667648 0.21451828976511034 0.05819124088404701 0.0 0.0 0.061218158402428176 0.014847584422329283 1.1609160892227131e-10 9.935199169843274 -0.10594088598750973 YLS(ph)PLGK ddPTM_KYSE-520_SHP099_60min_R1 1 YLSPLGK 7 0 A0A075B754;Q96QE3;Q96QE3-2 A0A075B754 ATAD5 ATPase family AAA domain-containing protein 5 1 YLS(1)PLGK 76.17 0.020213 825320000.0 181080.0 189520.0 151430.0 139380.0 165090.0 181500.0 157100.0 161710.0 185600.0 184650.0 True False 171035.13142596922 180415.17472468046 161191.42009656678 152626.6332938751 178081.6437663918 180367.19117599365 172981.2011482476 161149.0657533976 151899.71859525438 183014.14465552603 0.9345459704652663 0.9857990761548108 0.8807593555130149 0.8339608590426324 0.9730485263944034 0.9855368912358411 0.9451794093502298 0.8805279289025257 0.8299889545759644 1.0 17.4815956291526 -10.080752796756629 5.323338301395651 1.0000010401343047 0.9186133223969436 0.16802427182255864 0.055515065873227236 7.360140547264639e-07 1.2701600476339706e-07 0.057729036050517456 0.0140011688337398 8.303232584276087e-11 10.080752796756629 -0.08138771773736109 YLSFT(ph)PPEK ddPTM_KYSE-520_SHP099_60min_R1 1 YLSFTPPEK 9 0 Q13177 Q13177 PAK2 Serine/threonine-protein kinase PAK 2;PAK-2p27;PAK-2p34 1 YLS(0.069)FT(0.931)PPEK 139.32 0.0020350000000000004 225000000.0 655190.0 604930.0 467660.0 591510.0 505640.0 666510.0 558890.0 693320.0 681450.0 702400.0 True False 618845.3046111158 575868.2547815588 497806.1118824568 647726.9325560342 545430.9913019465 662350.0638606692 615388.0554407642 690915.034742104 557715.857956552 696177.2824589303 0.888919130519924 0.8271862200782616 0.7150565300323829 0.9304051552332084 0.7834656560114387 0.9514100510737986 0.8839530834260854 0.9924412245998034 0.8011118317257837 1.0 19.409095211482345 -6.267408721775851 24.924687741250477 0.9226964317281579 0.8282081095238752 0.29114007132154285 0.07542200703758666 625.5031114878846 2611747.4266794734 0.02499558368497526 0.022612235788708256 5.40245649436928e-07 6.267408721775851 -0.0944883222042826 YLSPGWGS(ph)ASEEEPSR ddPTM_KYSE-520_SHP099_60min_R1 1 YLSPGWGSASEEEPSR 16 0 Q9BRS8;H0YMC6;Q9BRS8-2 Q9BRS8 LARP6 La-related protein 6 1 YLSPGWGS(0.962)AS(0.038)EEEPSR 251.04 1.5204000000000002e-23 328740000.0 99876.0 118970.0 94803.0 100390.0 124600.0 126950.0 119510.0 97226.0 119670.0 98876.0 True False 94335.67918212998 113254.50262238947 100914.15307016307 109931.03541664593 134405.31112297784 126157.65796028859 131591.23710520082 96888.74569871897 97940.94463520522 98000.03556436399 0.9626086219139446 1.1556577706342435 1.0297358821251157 1.1217448522704458 1.3714822688477881 1.287322573239592 1.342767238270796 0.98866031160861 0.9993970315539328 1.0 16.580494652333645 -7.301075081516467 24.534339024727828 0.9955213513896952 1.1838423600063408 0.32730503360257757 0.12190152445755648 578.4376332902737 358047.2529082224 0.07343293750106776 0.03527701920234939 4.999480956883243e-08 7.301075081516467 0.18832100861664558 YLSVPPS(ph)PNISTSES(ph)RSPPEGDTTLFLSR ddPTM_KYSE-520_SHP099_60min_R1 1 YLSVPPSPNISTSESRSPPEGDTTLFLSR 29 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 2 YLSVPPS(0.926)PNIS(0.033)T(0.034)S(0.035)ES(0.598)RS(0.358)PPEGDT(0.005)T(0.006)LFLS(0.005)R 75.954 0.011037 53239000.0 56441.0 64939.0 55163.0 58503.0 53696.0 52499.0 49555.0 55191.0 69627.0 60411.0 True False 53310.105217655924 61819.23296457373 58718.89524392066 64063.1075304317 57921.56971155237 52171.33426748474 54564.50301019356 54999.555302676235 56984.49195383499 59875.80553904683 0.8903446849310577 1.0324576414134343 0.9806781673380293 1.0699331216288055 0.9673618449071213 0.871325801762487 0.9112946793611051 0.9185605906681181 0.9517114874834323 1.0 15.869685539824081 -6.006050247785481 24.98026776018735 0.9237344733103521 0.9981669768950567 0.23428188903826874 0.05271154008275403 332.6722545531253 1373545.137991226 0.01610790219690043 0.017667700189671332 9.861653798913318e-07 6.006050247785481 0.07443250358470466 YLSVPPS(ph)PNISTSESR ddPTM_KYSE-520_SHP099_60min_R1 1 YLSVPPSPNISTSESR 16 0 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPS(0.948)PNIS(0.017)T(0.028)S(0.007)ESR 100.77 0.0011087 0.0 357280.0 391180.0 308270.0 324550.0 325790.0 343910.0 352720.0 358630.0 417260.0 375690.0 True False 337460.9661799777 372387.1256268495 328141.57744943915 355395.13442048454 351427.8195084673 341763.5301230628 388376.3798154677 357385.9962348714 341496.1022686197 372361.6788823973 0.906272007347345 1.000068338784293 0.8812442204963735 0.9544353100113954 0.9437808438377421 0.91782680524169 1.0430084561363477 0.9597818908420603 0.9171086114274238 1.0 18.506345081890295 YLSVPPSPNIS(ph)TSESRSPPEGDTTLFLSR ddPTM_KYSE-520_SHP099_60min_R1 1 YLSVPPSPNISTSESRSPPEGDTTLFLSR 29 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPS(0.062)PNIS(0.212)T(0.212)S(0.212)ES(0.177)RS(0.124)PPEGDTTLFLSR 74.446 0.012255 95435000.0 36122.0 48262.0 32554.0 25762.0 31074.0 32358.0 27521.0 32677.0 48448.0 29910.0 True False 34118.24065257821 45943.421077261104 34652.482928241625 28210.412734372265 33519.347013125334 32156.041719409346 30303.091259076526 32563.651113869142 39651.064474692306 29645.020669627866 1.1508927935251294 1.549785429036027 1.1689141091995945 0.9516071197506232 1.1306906271604265 1.0847029616799724 1.022198351513476 1.0984526365074014 1.3375286499737848 1.0 14.855502182178977 -4.984937530291987 24.247817418789392 1.0896964103861688 1.3525920102917095 0.37885566154019557 0.1320760596894395 154.19364115764438 248218.59274462267 0.032878199504547366 0.06839770277169357 1.0352910741202395e-05 4.984937530291987 0.2628955999055407 YLSVPPSPNISTSES(ph)RSPPEGDTTLFLSR ddPTM_KYSE-520_SHP099_60min_R1 1 YLSVPPSPNISTSESRSPPEGDTTLFLSR 29 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPS(0.007)PNIS(0.007)T(0.007)S(0.007)ES(0.486)RS(0.486)PPEGDTTLFLSR 113.92 0.00023389 489990000.0 104930.0 136880.0 101670.0 92988.0 67619.0 107530.0 95342.0 90833.0 142580.0 107300.0 True False 99109.3237272308 130304.07933893138 108223.81087775172 101825.55156213831 72940.23060051879 106858.86538377184 104980.09980825105 90517.92152358149 116691.06614930705 106349.40547813672 0.9319217468273076 1.2252450190304003 1.0176249729952684 0.9574623487958434 0.6858546154779758 1.0047904349191672 0.9871244633316999 0.8511370713980169 1.0972422988607715 1.0 16.69845244270351 -5.144483597339748 3.675303365790931 0.9283141444547698 1.085403721840877 0.1618039480050122 0.12356115189330494 0.35822301972488946 8.69503325412972 0.03375965071835871 0.06272306239276171 7.169954549269271e-06 5.144483597339748 0.15708957738610718 YLSVPPSPNISTSESRS(ph)PPEGDTTLFLSR ddPTM_KYSE-520_SHP099_60min_R1 1 YLSVPPSPNISTSESRSPPEGDTTLFLSR 29 1 Q9BTC0;Q9BTC0-1 Q9BTC0 DIDO1 Death-inducer obliterator 1 1 YLSVPPSPNIS(0.001)T(0.001)S(0.001)ES(0.21)RS(0.787)PPEGDTTLFLSR 175.38 1.3166999999999997e-10 491540000.0 325830.0 353200.0 304330.0 260550.0 259760.0 326360.0 202930.0 297070.0 369390.0 304080.0 True False 307755.56037399825 336231.74183599115 323947.5987452163 285312.59366278595 280201.6341677748 324323.06618290447 223444.14480594476 296039.53350665944 302318.0875641217 301386.0877706604 1.0211339304028682 1.1156179912718682 1.074859165336537 0.9466680953100078 0.9297099154125326 1.0761049674917242 0.7413883847749949 0.9822601159079731 1.0030923782857903 1.0 18.201253296921593 -5.260797424112629 22.951981926674698 0.9486306168376551 1.0750451446534999 0.2844045600882582 0.08417205437427706 21.943958890686027 784496.0155437425 0.02305562066004123 0.037053906141435604 5.4853276738902915e-06 5.260797424112629 0.12641452781584472 YLTAEAFGFK ddPTM_KYSE-520_SHP099_60min_R1 1 YLTAEAFGFK 10 0 Q16658 Q16658 FSCN1 Fascin 0 172.94 0.00078196 0.0 245280.0 317230.0 224090.0 187560.0 314140.0 282200.0 241600.0 228090.0 251270.0 207930.0 False True 231673.82944644245 301989.79462806217 238535.19995667686 205385.64600802955 338861.0307878997 280438.68512322527 266023.28578877554 227298.80902660606 205645.7020012371 206087.90196709224 1.124150555346212 1.4653446017237992 1.1574439725955663 0.9965924445231393 1.6442548424895336 1.3607721872388474 1.2908243679012932 1.10292165069884 0.9978543138067089 1.0 17.652900290889104 -7.407857393415093 2.771478049890225 1.003671865951504 1.2988502152738266 0.3322669724389621 0.1712368160402442 0.34626689446739267 5.0044067498419365 0.12504825425945887 0.04849212239482879 3.909692548658818e-08 7.407857393415093 0.29517834932232256 YLVDGTKPNAGS(ph)EEIS(ph)S(ph)EDDELVEEK ddPTM_KYSE-520_SHP099_60min_R1 3 YLVDGTKPNAGSEEISSEDDELVEEK 26 1 Q9NY61 Q9NY61 AATF Protein AATF 3 YLVDGTKPNAGS(1)EEIS(1)S(1)EDDELVEEK;YLVDGTKPNAGS(1)EEIS(1)S(1)EDDELVEEK;YLVDGT(0.001)KPNAGS(0.999)EEIS(1)S(1)EDDELVEEK 197.0 1.1799e-14 1933400000.0 3952570.0 3628200.0 3226030.0 3501920.0 3853190.0 3744720.0 3619370.0 3669070.0 4413250.0 3543370.0 True False 3733313.062847047 3453895.8259607702 3433985.055630498 3834741.4239093633 4156414.1313478956 3721347.8134466447 3985251.241247185 3656342.852537374 3611915.048979025 3511978.498500142 1.0630227561021317 0.9834615523517081 0.9777921639033519 1.0919034457491876 1.1834964630686016 1.0596157735692056 1.1347595786674558 1.0411062750238607 1.0284559118233676 1.0 21.743852581565847 -5.270906636451266 24.666473094259402 1.0848746046570414 1.0056290968985464 0.24268660815009213 0.054557270295824925 672.242060096223 1751491.660457906 0.015547463862303643 0.023406458601972085 5.359118541295081e-06 5.270906636451266 -0.07924550775849504 YLVDGTKPNAGSEEIS(ph)S(ph)EDDELVEEKK ddPTM_KYSE-520_SHP099_60min_R1 1 YLVDGTKPNAGSEEISSEDDELVEEKK 27 2 Q9NY61 Q9NY61 AATF Protein AATF 2 YLVDGTKPNAGSEEIS(1)S(1)EDDELVEEKK 108.52 0.00045549999999999996 193660000.0 136890.0 129960.0 115290.0 121590.0 115530.0 115110.0 114100.0 111330.0 164570.0 116110.0 True False 129296.43881655039 123716.52652606291 122721.77787052223 133145.87704263348 124621.55372421848 114391.55579211362 125634.34150868922 110943.82221461732 134688.2364720962 115081.35573221296 1.1235220335552445 1.0750353585853076 1.0663914853079073 1.1569717457313895 1.0828995968226596 0.9940059800676622 1.0917002211985787 0.9640468823879393 1.1703740854905047 1.0 16.812294596600054 -6.011701304496513 24.556498155209244 1.0440574506764777 1.102941253025939 0.19729140417696867 0.05876317950592534 746.098444251744 1565774.8269292882 0.017675852469304688 0.018678685330075814 9.73416482021405e-07 6.011701304496513 0.058883802349461334 YLVLDEADR ddPTM_KYSE-520_SHP099_60min_R1 1 YLVLDEADR 9 0 A0A0D9SG12;A0A2R8YF78;A0A2R8Y645;A0A2U3TZJ9;O00571;F6S8Q4;A0A0D9SF53;O00571-2;A0A0D9SFB3;A0A2R8Y7T2;O15523-2;A0A2R8YDH3;O15523;D6RCM4;Q9NQI0-3;Q9NQI0-2;Q9NQI0-4;Q9NQI0;A0A2R8Y5G6;A0A2R8YCW1;A0A2R8YFR4;A0A2R8YFS5;A0A2R8Y4A4;A0A2R8YDT5 A0A0D9SG12;A0A2R8Y5G6 DDX3X;DDX3Y;DDX4 ATP-dependent RNA helicase DDX3X;ATP-dependent RNA helicase DDX3Y;Probable ATP-dependent RNA helicase DDX4 0 138.54 0.0033356 100230000.0 223310.0 315160.0 270590.0 169310.0 243470.0 240450.0 195680.0 226250.0 259720.0 238650.0 False True 210922.5491425514 300019.24053519586 288032.6643593075 185401.17149509257 262629.70384519617 238949.26235960118 215461.24405276316 225465.19155714693 212561.39500840227 236535.74666689074 0.8917153204736958 1.2683885829641972 1.217713045144669 0.7838188269961152 1.1103171826922766 1.010203598089169 0.9109035191885544 0.9531971160142053 0.8986438540629922 1.0 17.851698702999194 -5.241005062427927 24.988903129429612 0.9577447231031165 1.1401839436505534 0.2966639262728127 0.12163781772671027 974.7632829153241 1192025.7071630321 0.03224014624507605 0.055757412585735494 5.74109769959571e-06 5.241005062427927 0.1824392205474369 YLWNNIK ddPTM_KYSE-520_SHP099_60min_R1 1 YLWNNIK 7 0 K7EIV0;K7EKD8;K7ELJ7;A0A0C4DGQ5;Q96L46;P04632;U3KPR7;U3KQE2;A0A075B7C0 K7EIV0 CAPNS1;CAPNS2 Calpain small subunit 2;Calpain small subunit 1 0 129.96 0.015556 355400000.0 1542100.0 1463600.0 1390600.0 1527600.0 1813900.0 1685900.0 1497600.0 1481100.0 1841600.0 1690900.0 False True 1456556.6388998656 1393286.4590916107 1480240.3010386676 1672782.6447103145 1956643.6103207842 1675377.672747149 1648992.0231675098 1475962.409791339 1507211.8629580855 1675919.9415002922 0.8691087222197192 0.8313562149301318 0.8832404605876035 0.9981280151203588 1.167504223721562 0.9996764351687003 0.983932455443739 0.8806878975794332 0.8993340467139628 1.0 20.676521802634007 -5.176902212001594 4.195535287546618 0.99246258874911 0.8527335200987232 0.3996869265842522 0.07275460078244968 0.2570950196049454 8.290811466661877 0.022880427433986997 0.04111048314762211 6.654229694223597e-06 5.176902212001594 -0.1397290686503868 YLYPNIDKDHAFGK ddPTM_KYSE-520_SHP099_60min_R1 2 YLYPNIDKDHAFGK 14 1 J3KPM9;A0A669KBI6;A0A669KB68;A0A669KB56;A0A669KBA4;A0A669KB53;P42224-2;P42224 J3KPM9 STAT1 Signal transducer and activator of transcription;Signal transducer and activator of transcription 1-alpha/beta 0 ; 194.48 7.057600000000001e-11 4148200000.0 4752800.0 4009100.0 2826400.0 2680700.0 4853200.0 4541700.0 3368300.0 3642400.0 3397100.0 2934000.0 False True 4489152.709528099 3816496.818218219 3008594.2663998916 2935472.922018157 5235119.229069318 4513353.565641924 3708800.6354401144 3629765.364542552 2780272.2739220844 2908007.042617458 1.5437214022313621 1.312409757709198 1.0345897455915019 1.0094449150219311 1.8002429678977867 1.5520435471777658 1.2753753966503028 1.2481968961379988 0.9560748076523222 1.0 21.47159933250774 -7.619565432565839 2.5185877063723647 0.9690480948415922 1.3565546456099902 0.3090790137923848 0.22497968791518946 0.4081761557286351 4.815367009945258 0.21524407410047317 0.066647800855726 2.4012344609201747e-08 7.619565432565839 0.387506550768398 YLYVDK ddPTM_KYSE-520_SHP099_60min_R1 1 YLYVDK 6 0 P35579;Q5BKV1;B1AH99 P35579 MYH9 Myosin-9 0 117.56 0.063277 1537000000.0 2702200.0 2498300.0 1838200.0 1944300.0 2818500.0 2747000.0 2223700.0 2459100.0 2273600.0 2322700.0 False True 2552303.5792978513 2378277.9179752497 1956693.3132239897 2129085.6874248907 3040299.9149286756 2729854.9540520906 2448493.297220614 2450569.956058253 1860771.5527918653 2302122.685033253 1.1086740059038098 1.0330804406894138 0.849951797071895 0.9248358922253256 1.3206506910750329 1.1857990765651394 1.0635807175434036 1.0644827801707084 0.8082851382722843 1.0 21.134533289142148 -7.734639478133752 22.75568934428039 0.9041429194061978 1.0677023343427865 0.20627945965929195 0.12924312048634704 120.78368441974763 102558.09626224799 0.0957470626753894 0.03615147562357991 1.8423007201497162e-08 7.734639478133752 0.16355941493658865 YMACCLLYR ddPTM_KYSE-520_SHP099_60min_R1 1 YMACCLLYR 9 0 Q9BQE3;F5H5D3;A0A1W2PQM2;A6NHL2-2;A6NHL2;P68363;P68366-2;P68366;P68363-2;Q71U36-2;Q71U36 Q9BQE3;P68363;Q71U36-2 TUBA1C;TUBAL3;TUBA1B;TUBA4A;TUBA1A Tubulin alpha-1C chain;Tubulin alpha chain-like 3;Tubulin alpha-1B chain;Tubulin alpha-4A chain;Tubulin alpha-1A chain 0 137.44 0.0034553000000000006 1065500000.0 355930.0 413770.0 291290.0 325150.0 624100.0 476680.0 383990.0 248580.0 321630.0 303800.0 False True 336185.8533711362 393891.8681185682 310067.01948047895 356052.15824008797 673213.1193567462 473704.86330453237 422807.45658125763 247717.73399900817 263230.09963249863 301108.5683528234 1.116493812215968 1.308139021992314 1.029751564947692 1.1824710276025243 2.2357820072655987 1.5732028679750807 1.404169462510392 0.8226857686385909 0.8742032851222595 1.0 18.19992423644907 -7.255883350398336 23.053906294594263 0.8863333558527284 1.4184375884281426 0.34668076012885196 0.3192834037006214 184.6610637746658 766233.1576881885 0.1717543180483426 0.09527573545052252 5.547747030110004e-08 7.255883350398336 0.5321042325754142 YMDGHHVK ddPTM_KYSE-520_SHP099_60min_R1 4 YMDGHHVK 8 0 M0R2Q2;M0R047;M0R1Y4;M0R003;Q3ZCQ8-3;Q3ZCQ8;Q3ZCQ8-2 M0R2Q2 TIMM50 Mitochondrial import inner membrane translocase subunit TIM50 0 ;;; 123.98 0.00099756 1277866000.0 1477952.0 1796981.0 1028357.0 1520741.0 2223870.0 1949763.0 1648815.0 1763306.0 1875448.0 1061477.0 False True 1395967.05633573 1710651.3354365276 1094646.5376493747 1665271.7674125475 2398875.916910569 1937593.8058891369 1815493.3110836924 1757189.5030447124 1534913.9193967301 1052073.1395966092 1.3268726325158138 1.6259813800516127 1.0404661961706285 1.5828479073717763 2.2801417759133717 1.8416911647721166 1.7256341244295974 1.6702161065707488 1.4589422176344642 1.0 20.00480357287592 -5.5149226402923 24.977700277226845 1.72865485464263 1.352437973071359 0.14992066994963604 0.33118393972338306 579.1820426892117 1818308.636380483 0.09478691639058585 0.12827099174925416 3.055465326563092e-06 5.5149226402923 -0.376216881571271 YMEDS(ph)TYYK ddPTM_KYSE-520_SHP099_60min_R1 3 YMEDSTYYK 9 0 E9PEI4;H0YB16;H0YBZ1;H0YBP1;E7ESA6;Q05397-7;Q05397;Q05397-2;Q05397-5;Q05397-4;Q05397-3 E9PEI4 PTK2 Focal adhesion kinase 1 1 YMEDS(0.478)T(0.478)Y(0.045)YK;YMEDS(0.407)T(0.407)Y(0.185)YK;YMEDS(0.39)T(0.39)Y(0.203)Y(0.016)K 174.27 7.7809e-07 3288420000.0 5560400.0 6407500.0 5933500.0 6233400.0 6886500.0 4836900.0 5438900.0 6456900.0 7763200.0 5371500.0 True False 5251953.527617412 6099674.08214642 6315982.903935667 6825820.461859953 7428428.371174861 4806711.112943051 5988717.090548723 6434502.520951789 6353598.57434634 5323912.688963758 0.9864837825955496 1.145712643783731 1.1863423149347336 1.2821060112442462 1.395294927840134 0.9028531070592418 1.1248713944845632 1.2086040656320747 1.193407733285536 1.0 22.34405548087603 -6.260249103704966 24.999235713798562 1.101417782682913 1.2001099889116735 0.15850651941984018 0.1279921583478731 266.9852020704682 5607462.987650247 0.0462219632400575 0.04372991815244954 5.492257572229484e-07 6.260249103704966 0.09869220622876052 YMLTHQELAS(ph)DGEIETK ddPTM_KYSE-520_SHP099_60min_R1 15 YMLTHQELASDGEIETK 17 0 Q02241-2;Q02241-3;Q02241;A0A2U3TZL8;H7BYN4 Q02241-2 KIF23 Kinesin-like protein KIF23;Kinesin-like protein 1 YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLTHQELAS(1)DGEIETK;YMLT(0.007)HQELAS(0.993)DGEIETK;YMLTHQELAS(1)DGEIETK 324.39 9.738e-48 36290670000.0 24914050.0 24664570.0 22709750.0 25622780.0 24258560.0 23827160.0 22791080.0 26511160.0 30123950.0 23213250.0 True False 23532017.981572613 23479647.034925636 24173656.821884707 28057961.307430286 26167570.659674387 23678445.856203742 25095024.7859058 26419198.973711286 24654200.042982325 23007598.66463524 1.0227933094879411 1.0205170638262209 1.0506814367829618 1.219508463982289 1.1373447112451727 1.0291576361943262 1.090727683131883 1.1482814594779933 1.0715677199671454 1.0 24.45560707952461 -5.013766270393699 24.588191862611474 1.106364016098929 1.0251411693850379 0.225358072494393 0.058544720144698296 688.5970162306007 1229923.7087785152 0.015872545925625998 0.029113675419604343 9.687991065232538e-06 5.013766270393699 -0.08122284671389113 YMNSDTTS(ph)PELR ddPTM_KYSE-520_SHP099_60min_R1 1 YMNSDTTSPELR 12 0 Q96ST3 Q96ST3 SIN3A Paired amphipathic helix protein Sin3a 1 YMNS(0.001)DT(0.04)T(0.266)S(0.693)PELR 78.888 0.011822 366890000.0 1067700.0 1818100.0 1343500.0 1072800.0 1301000.0 1300800.0 1164800.0 1309500.0 2136000.0 1131900.0 True False 1008472.552592817 1730755.7469762613 1430104.1596760037 1174758.589450918 1403381.2983225852 1292681.2246927412 1282549.351352506 1304957.6501395965 1748156.2441781426 1121872.2466048747 0.8989192447221691 1.5427387139792899 1.2747477834521106 1.0471411455324733 1.2509279042864658 1.1522535017732956 1.1432222833160273 1.1631963034015627 1.5582489445376628 1.0 20.097476967478254 -4.194026968941743 21.563460812045125 1.2321536557345218 0.89889758827328 0.2474323712954355 0.17667508413355926 32442.39420559221 10374767.538992489 0.04288004237146844 136.28584992188746 6.396951102810878e-05 4.194026968941743 -0.3332560674612418 YMS(ph)FTDK ddPTM_KYSE-520_SHP099_60min_R1 10 YMSFTDK 7 0 E9PM17;B3KNX7;Q13153;Q13153-2;H0YCM0 E9PM17 PAK1 Non-specific serine/threonine protein kinase;Serine/threonine-protein kinase PAK 1 1 YMS(0.985)FT(0.015)DK;Y(0.001)MS(0.987)FT(0.012)DK;YMS(0.996)FT(0.004)DK;YMS(0.99)FT(0.01)DK;YMS(0.996)FT(0.004)DK;YMS(1)FTDK;YMS(1)FTDK;YMS(1)FTDK;YMS(0.999)FT(0.001)DK;YMS(0.998)FT(0.002)DK 120.99 0.0024892 22753930000.0 47712000.0 41590000.0 39297500.0 42684200.0 44697500.0 44042100.0 41072500.0 46710900.0 51072300.0 48354200.0 True False 45065320.24848605 39591953.972137295 41830679.72822308 46740893.534527354 48214938.9560137 43767216.917312466 45224509.12897135 46548870.790305994 41798857.74791167 47925819.40699834 0.9403140270963299 0.8261090673466066 0.872821377825306 0.9752758348812299 1.0060326469655132 0.913228348703442 0.9436355953544213 0.9712691690255947 0.8721573937619107 1.0 25.51429976265284 -5.251960213465145 24.267284398042733 0.9532901135117072 0.8743842362810845 0.35962754287805054 0.045530816530767654 472.2269245740305 1208927.548097515 0.012140488518204685 0.020666533616959776 5.598088842915013e-06 5.251960213465145 -0.0789058772306227 YMSGQTS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 YMSGQTSPR 9 0 E9PFK9;Q9UJ41;Q9UJ41-4;Q9UJ41-3;A0A0A0MSJ3;Q3HKR1 E9PFK9 RABGEF1 Rab5 GDP/GTP exchange factor 1 YMS(0.022)GQT(0.037)S(0.94)PR 56.086999999999996 0.052351999999999996 627270000.0 1540200.0 1432800.0 1229800.0 1192600.0 1245200.0 1473900.0 1302400.0 1350900.0 1470200.0 1391700.0 True False 1454762.0356874217 1363966.1373233534 1309074.8757495703 1305944.3454317346 1343190.1557811564 1464700.8433845546 1434059.3021990953 1346214.0432024295 1203248.740725986 1379370.6207262166 1.0546563873612973 0.9888322375644387 0.9490378119409005 0.9467682766392225 0.9737703091530167 1.0618617080690127 1.03964756146835 0.9759625317332549 0.8723172167408457 1.0 20.39557871351798 -7.533865682429978 24.942232515158345 0.9321523319243525 0.9992715497177633 0.22920812691055525 0.047789216528655226 328.16884435711717 744981.73486226 0.03351441444181437 0.01269318377677779 2.925056892639444e-08 7.533865682429978 0.06711921779341079 YMSQMS(ph)VPEQAELEK ddPTM_KYSE-520_SHP099_60min_R1 5 YMSQMSVPEQAELEK 15 0 A0A4W8VX11;A0A5H1ZRS1;Q15154-4;Q15154-2;Q15154-5;Q15154;E9PGW9;E7EV93;E5RGQ4;Q15154-3 A0A4W8VX11 PCM1 Pericentriolar material 1 protein 1 YMSQMS(1)VPEQAELEK;YMSQMS(1)VPEQAELEK;YMSQMS(1)VPEQAELEK;YMS(0.002)QMS(0.998)VPEQAELEK;YMSQMS(1)VPEQAELEK 257.02 6.755999999999999e-25 3553540000.0 4393130.0 3680440.0 2946910.0 3175290.0 2981010.0 5195240.0 4493940.0 5424290.0 5840670.0 5479170.0 True False 4149434.3214124586 3503626.1379469344 3136872.5338227144 3477068.606914252 3215598.5273732585 5162814.580083575 4948231.31182785 5405474.404028802 4780151.559308973 5430628.816529762 0.764079899694562 0.6451603039564384 0.5776260244991691 0.6402699805832323 0.5921226870791853 0.9506844887591999 0.9111709673042669 0.9953680479092228 0.8802206375731546 1.0 22.372687827752515 -6.266276757728717 24.994954795522915 0.9449294799622443 0.6400462737000967 0.8762367129909473 0.05704411635288249 133.99812674840715 692371.9961375368 0.019734804661724448 0.01795049234103766 5.416556059080655e-07 6.266276757728717 -0.3048832062621476 YNAPTSHVT(ph)PSVK ddPTM_KYSE-520_SHP099_60min_R1 1 YNAPTSHVTPSVK 13 0 A0A087X2D8;O60271-4;O60271-2;O60271-5;O60271-9;O60271;O60271-3 A0A087X2D8;O60271 SPAG9 C-Jun-amino-terminal kinase-interacting protein 4 1 YNAPT(0.004)S(0.01)HVT(0.972)PS(0.014)VK 122.33 0.00041547 448830000.0 328530.0 403570.0 321910.0 364290.0 268760.0 338830.0 260940.0 325540.0 382070.0 370200.0 True False 310305.78599168145 384181.8914290799 342660.8336742109 398912.0120722178 289909.8829647795 336715.23628739355 287318.3617289859 324410.77772160736 312695.7192009101 366920.31601124135 0.8457034741629695 1.0470444798627876 0.9338835129088703 1.087189764820753 0.7901167373787433 0.9176794568035791 0.7830538380986877 0.8841450406678173 0.8522169679787642 1.0 18.48510726181756 -5.771788636451217 24.998440852563284 0.8633257335683031 0.9801708472769104 0.27959957720001216 0.08375161898212743 239.6953078535423 578977.7373503259 0.02405161894865513 0.02756431632163355 1.6912638399890344e-06 5.771788636451217 0.11684511370860728 YNDTFWK ddPTM_KYSE-520_SHP099_60min_R1 1 YNDTFWK 7 0 P14625;Q58FF3 P14625 HSP90B1;HSP90B2P Endoplasmin;Putative endoplasmin-like protein 0 89.75200000000001 0.056984 814640000.0 1631500.0 1262900.0 783500.0 979870.0 1621000.0 1466500.0 1047900.0 1345000.0 1044700.0 1169200.0 False True 1540997.4426853808 1202228.3883484548 834005.6636443238 1072996.5501913414 1748563.477771648 1457347.0295294472 1153831.9585184525 1340334.5089253602 855008.8147438696 1158841.7976238348 1.3297737843467012 1.03743961497901 0.7196889733822371 0.9259215126615936 1.5088888589944005 1.2575892865770695 0.9956768567412266 1.156615606784006 0.737813234297413 1.0 20.14425219575304 -7.748938924839302 24.99410428018686 0.8689065839809276 1.1079996388707727 0.1716027316098322 0.2169194067246791 387.98225526940803 775763.2627782719 0.1603318278901067 0.05967419204656246 1.782629442344982e-08 7.748938924839302 0.2390930548898451 YNDWS(ph)DDDDDSNESK ddPTM_KYSE-520_SHP099_60min_R1 4 YNDWSDDDDDSNESK 15 0 Q9UH62;H3BV87 Q9UH62 ARMCX3 Armadillo repeat-containing X-linked protein 3 1 YNDWS(1)DDDDDSNESK;YNDWS(1)DDDDDSNESK;YNDWS(1)DDDDDSNESK;YNDWS(1)DDDDDSNESK 378.62 9.435699999999998e-69 1936900000.0 4316870.0 4372970.0 3877720.0 4316440.0 4461690.0 4229410.0 4234170.0 4675510.0 5791980.0 3902050.0 True False 4077404.6156330034 4162885.9572382094 4127684.035771374 4726673.159814991 4812799.6194564905 4203012.683370018 4662201.2251169635 4659291.7470822325 4740302.4359339485 3867480.8727489584 1.0542791935606481 1.0763817829250906 1.067279754337212 1.2221581218720623 1.244427516983584 1.0867571997537944 1.205487855923933 1.2047355631187555 1.2256821925959775 1.0 21.88296272593489 -5.24687994225659 23.934244452075557 1.1795480603227018 1.0670203687008821 0.3033917897061156 0.07110435687919393 508.67650442941067 836209.6640252123 0.018411490488290935 0.0316746755883456 5.663958436606801e-06 5.24687994225659 -0.11252769162181964 YNEQHVPGSPFTAR ddPTM_KYSE-520_SHP099_60min_R1 1 YNEQHVPGSPFTAR 14 0 Q60FE5;P21333-2;P21333;A0A087WWY3 Q60FE5 FLNA Filamin-A 0 67.102 0.044685 955850000.0 1133000.0 1133300.0 749480.0 766990.0 1173700.0 980440.0 843190.0 930080.0 849220.0 821920.0 False True 1070150.2314204948 1078854.56688202 797792.6800104004 839884.4989960488 1266063.512560507 974320.7102842481 928427.8739413803 926853.7695623046 695023.0550940848 814638.4282440847 1.3136505648612158 1.3243354713912048 0.979321196190076 1.0309905227603624 1.554141651885301 1.1960161422587825 1.1396809207031438 1.1377486470409883 0.8531675292953891 1.0 19.635800345406587 -7.530106677911567 2.3271743231016897 0.9294420096672111 1.2213768682120407 0.3423084904472381 0.15740121351427502 0.38073541143581635 3.8259147526418817 0.13798215355942944 0.045518814708019474 2.950484395505285e-08 7.530106677911567 0.2919348585448296 YNEWADDRR ddPTM_KYSE-520_SHP099_60min_R1 2 YNEWADDRR 9 1 Q92620 Q92620 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 0 ; 106.62 0.0035013000000000006 1046880000.0 853390.0 819650.0 703860.0 589050.0 844180.0 869910.0 646430.0 714090.0 797660.0 682760.0 False True 806050.7555092117 780272.7836802669 749231.9418158187 645033.1348956592 910612.1632728366 864480.5690132707 711777.4529488338 711612.9884598587 652825.0513722553 676711.2775792426 1.191129484929891 1.1530364714350387 1.107166330219883 0.9531880970021607 1.3456435461373026 1.2774732705884901 1.0518185177806276 1.0515754828343749 0.9647024853901741 1.0 19.368180906093606 -6.94893032685937 9.51138406988092 1.0151309182049297 1.1656651404187905 0.3718810524523354 0.09918320416597341 0.4486098687020635 79.49452560925985 0.04498155541939717 0.030279171357309728 1.124785406943324e-07 6.94893032685937 0.1505342222138608 YNLDAS(ph)EEEDSNK ddPTM_KYSE-520_SHP099_60min_R1 9 YNLDASEEEDSNK 13 0 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YNLDAS(1)EEEDSNK;YNLDAS(1)EEEDSNK;YNLDAS(1)EEEDSNK;YNLDAS(1)EEEDSNK;YNLDAS(1)EEEDSNK;YNLDAS(1)EEEDSNK;YNLDAS(1)EEEDSNK;YNLDAS(1)EEEDSNK;YNLDAS(1)EEEDSNK 287.91 3.4123e-34 20397210000.0 12823060.0 10211250.0 9509760.0 10719910.0 10862060.0 11183760.0 12295760.0 13068620.0 11657470.0 11173770.0 True False 12111739.299663635 9720686.22260128 10122774.345753979 11738727.02334152 11716842.325332705 11113958.005434858 13538735.41585346 13023288.007458836 9540767.308904212 11074779.090861516 1.0936325862840712 0.8777318394208349 0.9140384889579337 1.0599513477454252 1.0579752633622277 1.0035376700746719 1.2224835642116876 1.1759411091283216 0.8614860152629941 1.0 23.400774585773124 -5.286466668968991 15.032646181093416 1.0668390726042256 0.9533959284420056 0.12831668937813057 0.10669548521372972 9.048563298584291 5434.577913190187 0.03028254476126566 0.04511628369144556 5.1705093883102585e-06 5.286466668968991 -0.11344314416222001 YNLDAS(ph)EEEDSNKK ddPTM_KYSE-520_SHP099_60min_R1 11 YNLDASEEEDSNKK 14 1 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YNLDAS(0.994)EEEDS(0.006)NKK;YNLDAS(1)EEEDSNKK;YNLDAS(1)EEEDSNKK;YNLDAS(1)EEEDSNKK;YNLDAS(1)EEEDSNKK;YNLDAS(1)EEEDSNKK;YNLDAS(0.99)EEEDS(0.01)NKK;YNLDAS(0.722)EEEDS(0.278)NKK;YNLDAS(1)EEEDSNKK;YNLDAS(1)EEEDSNKK;YNLDAS(1)EEEDSNKK 264.16 1.0636000000000001e-24 30038050000.0 26119500.0 21494310.0 19236560.0 22405750.0 22668170.0 22625260.0 23262930.0 25130940.0 25667460.0 22403990.0 True False 24670599.267067634 20461691.083982933 20476579.43718426 24535185.743465595 24452026.014755666 22484047.359925937 25614573.988718044 25043766.634745475 21006896.288011596 22205508.078640446 1.1110126001034115 0.9214691693393453 0.9221396495259998 1.1049144048663346 1.1011694003199213 1.0125437022336552 1.15352343652775 1.1278177714310063 0.9460218705024003 1.0 24.404414245836268 -5.270435925834334 24.955953367090242 1.0722094203536323 0.9785333411876799 0.17087621173122391 0.07765138607708394 902.2311578204835 2502739.1105383732 0.02155881020139677 0.032505704447485725 5.364930177528824e-06 5.270435925834334 -0.09367607916595244 YNLDAS(ph)EEEDSNKKK ddPTM_KYSE-520_SHP099_60min_R1 9 YNLDASEEEDSNKKK 15 2 O95218-2;O95218 O95218-2 ZRANB2 Zinc finger Ran-binding domain-containing protein 2 1 YNLDAS(1)EEEDSNKKK;YNLDAS(1)EEEDSNKKK;YNLDAS(1)EEEDSNKKK;YNLDAS(1)EEEDSNKKK;YNLDAS(1)EEEDSNKKK;YNLDAS(0.978)EEEDS(0.022)NKKK;YNLDAS(1)EEEDSNKKK;YNLDAS(0.999)EEEDS(0.001)NKKK;YNLDAS(1)EEEDSNKKK 236.95 7.0953000000000005e-19 81421210000.0 16558350.0 14740970.0 13989860.0 14075690.0 13500290.0 13532070.0 12788030.0 13499650.0 16746420.0 12852160.0 True False 15639825.317247622 14032791.674552942 14891668.760167418 15413439.345589507 14562686.016857374 13447611.331663514 14080768.871545667 13452822.864992011 13705692.270894064 12738299.861229185 1.227779647804464 1.101622023929875 1.1690468054918628 1.2100075766392098 1.1432205377093505 1.0556833704781294 1.1053883975837684 1.056092493625274 1.075943604735611 1.0 23.60266940291654 -6.152068510740196 3.8978415488761087 1.0649383221355495 1.1716898074863595 0.666715553089851 0.03977594503372586 0.15703239762541346 4.228283012573393 0.013234637623322026 0.013231407997069254 7.045819111285734e-07 6.152068510740196 0.10675148535081003 YNQLLR ddPTM_KYSE-520_SHP099_60min_R1 2 YNQLLR 6 0 P06733;A0A2R8Y6G6;P06733-2 P06733 ENO1 Alpha-enolase 0 ; 164.83 0.040909 6633600000.0 2346100.0 2386600.0 1788300.0 1694780.0 2464500.0 2497000.0 2106150.0 2111570.0 2023000.0 2059590.0 False True 2215957.1561656008 2271944.1536403657 1903576.6793811673 1855851.3816458138 2658442.128913153 2481415.2967848796 2319060.1960431654 2104245.4565141443 1655674.1956799545 2041343.634936772 1.0855385238626112 1.1129650661245656 0.9325116294984446 0.9091322743920557 1.3023001533965126 1.2155794126556934 1.1360459632339144 1.030813930834982 0.811070790504724 1.0 20.961087631993312 -7.564178197166443 6.403971881947549 0.9072825162867871 1.097387154167181 0.29821128435733346 0.11763346549043198 0.264177134277674 27.983631974196353 0.08781633847783318 0.03280300018218447 2.727858274329343e-08 7.564178197166443 0.19010463788039378 YNTEGRVS(ph)PSPSQESLSSSK ddPTM_KYSE-520_SHP099_60min_R1 4 YNTEGRVSPSPSQESLSSSK 20 1 Q5JSH3-2;Q5JSH3;Q5JSH3-4;H7BY83;Q5JSH3-3 Q5JSH3-2 WDR44 WD repeat-containing protein 44 1 YNTEGRVS(0.838)PS(0.161)PS(0.001)QESLSSSK;YNTEGRVS(0.956)PS(0.044)PSQESLSSSK;YNTEGRVS(0.877)PS(0.123)PSQESLSSSK;YNTEGRVS(0.711)PS(0.287)PS(0.001)QESLSSSK 220.05 4.4019e-19 5656200000.0 1905100.0 1516490.0 1261960.0 1034680.0 1007950.0 1376560.0 1104040.0 1435750.0 1862970.0 1323130.0 True False 1799420.3052773024 1443635.544102103 1343307.9608073912 1133015.676112114 1087269.930549001 1367968.3784309963 1215647.137592052 1430769.7183565695 1524701.6096519444 1311408.097579563 1.3721284080817044 1.1008286030615406 1.0243248942009013 0.8639687967485453 0.8290858753699563 1.0431294277927865 0.9269785201385786 1.091017907390773 1.162644650788761 1.0 20.32268527756611 -4.282594999428601 1.9787284283228952 0.9843834687766968 1.475791585838437 0.5951703151182659 0.09474437637347463 0.5330167939504104 2.3207787527281876 0.027871155117527913 0.4694799005227748 5.21680977033598e-05 4.282594999428601 0.49140811706174015 YNVSTT(ph)PYLQSVK ddPTM_KYSE-520_SHP099_60min_R1 1 YNVSTTPYLQSVK 13 0 Q8WWK9-6;Q8WWK9-5;Q8WWK9 Q8WWK9-6 CKAP2 Cytoskeleton-associated protein 2 1 YNVS(0.011)T(0.106)T(0.849)PY(0.033)LQSVK 133.47 0.035651 0.0 192930.0 227730.0 161900.0 151080.0 164970.0 185970.0 158140.0 209850.0 217700.0 232470.0 True False 182227.78830358014 216789.50897030128 172336.33304915891 165438.5977761416 177952.20044909863 184809.2922479311 174126.33449766945 209122.0793293581 178171.1677704034 230410.49665892302 0.7908831886827282 0.94088382306304 0.7479534810615361 0.7180167578087407 0.7723267951308725 0.8020871224521708 0.7557222306387755 0.9076065646389444 0.7732771308338025 1.0 17.813846916619937 -9.188303119876155 0.6398197318462318 1.0137297133592145 0.7954565488233093 0.44429745366001894 0.06668693404448553 6.47574188826983 2.602789326795518 0.2983279434103178 0.02699280544876689 6.481818710611811e-10 9.188303119876155 -0.21827316453590517 YNWSAK ddPTM_KYSE-520_SHP099_60min_R1 1 YNWSAK 6 0 P61927;D6RG19 P61927 RPL37 60S ribosomal protein L37;Ribosomal protein L37 0 119.56 0.06199299999999999 1264100000.0 1759800.0 1757500.0 1175000.0 1150200.0 1735900.0 1729000.0 1342100.0 1595100.0 1459900.0 1466500.0 False True 1662180.3859256734 1673067.0619387182 1250742.380066471 1259514.6621797613 1872505.454080075 1718208.6696600164 1477772.5656337568 1589566.9703991383 1194818.9610841158 1453507.950919737 1.143564701434137 1.1510546336399814 0.8604991663616549 0.8665344151593924 1.2882663991588135 1.1821116414071107 1.0166938300534687 1.093607344489108 0.8220243723662257 1.0 20.471107532591308 -7.745869827913933 24.975876344537088 0.9110121692156435 1.0724052368750663 0.19626322818597342 0.13287546618349394 363.1417824917642 582539.0838114669 0.09665953288126636 0.03624880575430606 1.7952716471061827e-08 7.745869827913933 0.16139306765942274 YPDIAS(ph)PTFR ddPTM_KYSE-520_SHP099_60min_R1 6 YPDIASPTFR 10 0 Q8IVL0-3;Q8IVL0-2;Q8IVL0;H0YHA8;A0A2R8YFX5 Q8IVL0-3 NAV3 Neuron navigator 3 1 YPDIAS(0.5)PT(0.5)FR;YPDIAS(0.999)PT(0.001)FR;YPDIAS(0.977)PT(0.023)FR;YPDIAS(0.871)PT(0.129)FR;YPDIAS(0.978)PT(0.022)FR;YPDIAS(0.853)PT(0.147)FR 174.23 3.2877e-05 10826390000.0 9621700.0 8778900.0 8316000.0 7501000.0 7734400.0 8733300.0 7659400.0 8078600.0 8719900.0 9309300.0 True False 9087965.120616574 8357148.466602459 8852062.666070452 8213892.784742106 8343053.277283801 8678792.235246852 8433686.900540335 8050577.2221594155 7136585.970790738 9226826.844525812 0.984950218937768 0.9057445866734428 0.9593832002301307 0.8902185901120849 0.9042169553917286 0.9406042165401528 0.914039793165075 0.8725185112730002 0.7734604854999317 1.0 23.137403151891014 -7.207460939702036 3.9930431508271895 0.8667566755519244 0.9276642738750275 0.10696772610880478 0.05778928423489495 0.38195313353552296 12.630017127595849 0.028531415120906907 0.01506266878249943 6.202104226598055e-08 7.207460939702036 0.06090759832310311 YPEPERPS(ph)SR ddPTM_KYSE-520_SHP099_60min_R1 3 YPEPERPSSR 10 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 YPEPERPS(0.91)S(0.09)R;YPEPERPS(0.641)S(0.359)R;YPEPERPS(0.809)S(0.191)R 114.24 0.00096278 3277980000.0 2273360.0 2347070.0 2263580.0 2203230.0 2173710.0 1891550.0 1957640.0 2191510.0 2429910.0 2340330.0 True False 2147252.1889691926 2234313.2341761063 2409493.988656057 2412624.3167747455 2344768.610281931 1879744.1348151518 2155537.3559252406 2183908.163312282 1988699.5970463061 2319596.496949189 0.925700737948747 0.9632335783894957 1.0387556593679566 1.0401051734419802 1.0108519362595387 0.8103754843945722 0.9292725518254039 0.9415034753607497 0.8573472151996739 1.0 21.145442433953086 -6.212331336831825 24.993360877715 0.9053918873056505 0.9987797964565661 0.3746314072010438 0.05676012866186195 400.59773335914537 203882.5811172926 0.01883616097792442 0.01883612836464147 6.132939255301573e-07 6.212331336831825 0.09338790915091566 YPEPERPSS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 YPEPERPSSR 10 1 O15027;O15027-5;F1T0I1;O15027-2;O15027-4;O15027-3;A0A3F2YNX0;A0A3F2YNZ0 O15027 SEC16A Protein transport protein Sec16A 1 YPEPERPS(0.109)S(0.891)R;YPEPERPS(0.047)S(0.953)R 109.16 0.0031428000000000003 421540000.0 800580.0 822100.0 744550.0 795240.0 804690.0 830950.0 768520.0 801060.0 848900.0 810530.0 True False 756170.2314833362 782605.0820027416 792544.8843221198 870819.3705023754 868014.5249402005 825763.7328247486 846209.5016324078 798281.3098288092 694761.1590275405 803349.3347827977 0.9412719955606643 0.9741777930448343 0.9865507444982211 1.0839859234312053 1.08049448397799 1.0279011845426014 1.0533518420864794 0.9936913809042255 0.8648306893978865 1.0 19.61566795155022 -1.24384895960164 3.551553243441374 1.0060812430951964 0.31032188164316044 0.0 0.0632920272901496 0.0 0.0 0.01535617769225974 0.0 0.05703626004182609 1.24384895960164 -0.695759361452036 YPES(ph)NRTPVKPSSVEEEDSFFR ddPTM_KYSE-520_SHP099_60min_R1 1 YPESNRTPVKPSSVEEEDSFFR 22 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 YPES(0.507)NRT(0.432)PVKPS(0.03)S(0.03)VEEEDSFFR 50.144 0.049479 88226000.0 57231.0 59349.0 63319.0 62143.0 57886.0 54070.0 53804.0 57831.0 68680.0 63526.0 True False 54056.28234283 56497.784955334806 67400.644053982 68049.0520360258 62441.29887371351 53732.5290737519 59243.03339643738 57630.39775885689 56209.443281907734 62963.20906248014 0.8585375991428336 0.8973142537774795 1.0704766332208142 1.0807748373895434 0.9917108705776301 0.8533956555554788 0.940915088010347 0.9153027397582078 0.8927347274521783 1.0 15.942221452487328 -6.2200747117956015 24.560122990407105 0.9164538744883353 0.985833819131955 0.13998190832936508 0.07236805603209688 797.1094427114657 473280.85343410005 0.025926886274210505 0.025926583986801165 6.024559365036761e-07 6.2200747117956015 0.06937994464361974 YPESNRT(ph)PVKPS(ph)SVEEEDSFFR ddPTM_KYSE-520_SHP099_60min_R1 1 YPESNRTPVKPSSVEEEDSFFR 22 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 2 Y(0.005)PES(0.133)NRT(0.866)PVKPS(0.586)S(0.407)VEEEDS(0.003)FFR 80.439 0.020302 282540000.0 244400.0 255420.0 237540.0 256770.0 223910.0 238430.0 199900.0 257670.0 331590.0 265900.0 True False 230842.6448006787 243149.23980676406 252852.20847743805 281173.34359928436 241530.4431263722 236941.8699288822 220107.84283599435 256776.2029106303 271381.61470366595 263544.33286706946 0.8759157986414174 0.922612287509925 0.9594295036690299 1.0668920122107384 0.9164698800341841 0.899058869341708 0.8351833653240258 0.9743188180796398 1.0297380017674278 1.0 18.007686143804655 -7.518604819096097 23.523818456928346 1.0105888907805887 0.9285946411001684 0.2848664551519956 0.05754272478461804 131.16751181021428 722003.3581081537 0.04040729443215571 0.016150866043242746 3.029668984120108e-08 7.518604819096097 -0.08199424968042024 YPESNRT(ph)PVKPSSVEEEDSFFR ddPTM_KYSE-520_SHP099_60min_R1 7 YPESNRTPVKPSSVEEEDSFFR 22 2 Q9UHB7;Q9UHB7-2 Q9UHB7 AFF4 AF4/FMR2 family member 4 1 YPES(0.048)NRT(0.867)PVKPS(0.069)S(0.016)VEEEDSFFR;YPES(0.165)NRT(0.806)PVKPS(0.022)S(0.007)VEEEDSFFR;YPES(0.011)NRT(0.989)PVKPSSVEEEDSFFR;YPES(0.335)NRT(0.664)PVKPS(0.001)SVEEEDSFFR;YPES(0.279)NRT(0.718)PVKPS(0.002)SVEEEDSFFR;YPES(0.329)NRT(0.668)PVKPS(0.003)SVEEEDSFFR;YPES(0.326)NRT(0.416)PVKPS(0.199)S(0.059)VEEEDSFFR 183.59 1.35e-13 30387690000.0 8628120.0 7855040.0 7006120.0 7001400.0 6864930.0 7361010.0 6609290.0 7434260.0 8813060.0 7867480.0 True False 8149500.983869192 7477672.087744582 7457745.705388342 7666810.950952328 7405160.934891373 7315067.206161983 7277421.533654366 7408472.287229334 7212830.463163221 7797780.248006813 1.0451052382442148 0.9589488097790325 0.9563934181518661 0.9832042846952551 0.9496498618031974 0.9380960957487593 0.93326835358236 0.9500745150035499 0.9249850898282097 1.0 22.89463206753523 YPHVEDYRR ddPTM_KYSE-520_SHP099_60min_R1 1 YPHVEDYRR 9 1 K9J957;P61289;P61289-3;P61289-2;A0A087WTV2;B3KQ25;K7ESG5 K9J957 PSME3 Proteasome activator complex subunit 3 0 71.223 0.044099 321550000.0 263270.0 227850.0 199550.0 98056.0 184440.0 185630.0 138860.0 128310.0 172480.0 136580.0 False True 248665.88828426608 216903.7439901776 212413.31229128892 107375.21275838856 198954.37867995215 184471.41431404752 152897.3239430024 127864.9225577791 141161.97986696937 135370.00745763225 1.8369348791097089 1.602302814809725 1.5691312742061383 0.7931979525966605 1.4697079686740828 1.3627199833891042 1.1294771036402271 0.944558731724957 1.042786230998398 1.0 17.046548605630086 -1.0000000043286148 0.32958218618586393 1.0167284685385154 9.902059798394117 0.6140783304525098 0.20101885268728614 40.45018579904214 0.576490265214602 0.19003889513350306 218.82402028432514 0.09999999900329962 1.0000000043286148 8.885331329855601 YPIEHGIITNWDDMEK ddPTM_KYSE-520_SHP099_60min_R1 21 YPIEHGIITNWDDMEK 16 0 P68133;P68032;P63267;P62736;A6NL76;F8WB63;B8ZZJ2;C9JFL5;F6UVQ4;F6QUT6 P68133 ACTA1;ACTC1;ACTG2;ACTA2 Actin, alpha skeletal muscle;Actin, alpha cardiac muscle 1;Actin, gamma-enteric smooth muscle;Actin, aortic smooth muscle 0 ;;;;;;;;;;;;;;;;;;;; 201.3 2.3215e-12 114807244000.0 85338124.0 79968833.0 53762073.0 49666005.0 80806495.0 83995146.0 62596641.0 60957602.0 59269370.0 71126905.0 False True 80604248.1443874 76127010.22701445 57227662.24793824 54386247.18257106 87165506.43043625 83470901.13739663 68924520.35662416 60746154.306273304 48507546.46723067 70496775.9575948 1.14337495650684 1.079865131319003 0.8117770134957918 0.7714714104838704 1.2364467061992739 1.1840385606797965 0.9776974821952654 0.8616869847042837 0.6880817712346011 1.0 26.071053944186122 -7.233493218361348 3.7794451369523054 0.8266777627650544 1.0292730036342643 0.21696888153137894 0.15711632267107967 0.3666853715045543 11.510342842687278 0.0926824883548769 0.04690282176483561 5.841263283295084e-08 7.233493218361348 0.20259524086920988 YPLCSADAAVSTT(ph)PPGS(ph)PPPPPPLPEPPVLK ddPTM_KYSE-520_SHP099_60min_R1 5 YPLCSADAAVSTTPPGSPPPPPPLPEPPVLK 31 0 Q9BTC0 Q9BTC0 DIDO1 Death-inducer obliterator 1 2 YPLCS(0.001)ADAAVS(0.141)T(0.141)T(0.719)PPGS(0.998)PPPPPPLPEPPVLK;YPLCSADAAVS(0.033)T(0.033)T(0.936)PPGS(0.999)PPPPPPLPEPPVLK;Y(0.002)PLCS(0.001)ADAAVS(0.336)T(0.336)T(0.356)PPGS(0.97)PPPPPPLPEPPVLK;YPLCSADAAVST(0.009)T(0.991)PPGS(1)PPPPPPLPEPPVLK;YPLCSADAAVST(0.004)T(0.996)PPGS(1)PPPPPPLPEPPVLK 154.33 5.9896e-07 1867440000.0 929308.0 788592.0 810797.0 859007.0 893510.0 829556.0 849705.0 948792.0 977268.0 904547.0 True False 877757.4327104298 750706.856619276 863062.2719410682 940646.7670101284 963824.1536235322 824378.4332958258 935601.4737216529 945500.862001718 799820.7661214817 896533.4173069176 0.9790571280065736 0.8373439763955618 0.9626660370715541 1.049204356303552 1.0750565846376905 0.9195177975319236 1.043576798879501 1.054618649734098 0.8921259940583703 1.0 19.773997833419422 -4.996111993904614 24.71918667214302 1.0079592637003816 0.9061516346257584 0.26586446990940604 0.06403218661580105 117.18863140304985 745032.1956631375 0.016214087561321037 0.03351835066039088 1.0089926580434935e-05 4.996111993904614 -0.10180762907462315 YPPFPSDYLALQLPEPS(ph)PLRPK ddPTM_KYSE-520_SHP099_60min_R1 2 YPPFPSDYLALQLPEPSPLRPK 22 1 I3L0W8;I3NI13;I3L270;Q8NBZ0 I3L0W8 INO80E INO80 complex subunit E 1 YPPFPSDYLALQLPEPS(1)PLRPK;YPPFPSDYLALQLPEPS(1)PLRPK 141.78 6.7896e-07 263370000.0 173373.0 254443.0 189441.0 174244.0 176989.0 221907.0 160047.0 183589.0 222054.0 163826.0 True False 163755.65407949308 242219.17635327083 201652.66997631677 190804.09737163095 190917.02737034293 220521.9961007776 176226.11266819618 182952.17260899482 181734.5911258118 162374.62909469934 1.0085051771480156 1.4917304366066015 1.2418976480538095 1.1750856549168842 1.175781145335194 1.3581062345162669 1.08530571340316 1.1267288099687935 1.1192302155764828 1.0 17.30896670462822 -7.532570147124673 0.6718575672782384 1.0070331975481837 1.2525006711572677 0.25456145597839175 0.12513112747679936 0.8965055841707856 0.8652256193938549 0.1170211721202181 0.054140401893055905 2.933795599830217e-08 7.532570147124673 0.24546747360908405 YPPYTT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 YPPYTTPPR 9 0 O43896 O43896 KIF1C Kinesin-like protein KIF1C 1 YPPYT(0.065)T(0.935)PPR;YPPYT(0.054)T(0.946)PPR 105.52 0.0076135000000000005 2738480000.0 1665830.0 1777540.0 1282470.0 1225670.0 1240210.0 1504210.0 1058980.0 1499180.0 1690160.0 1604570.0 True False 1573423.089150224 1692144.3102580663 1365140.0682245528 1342157.3082888767 1337807.4711703714 1494821.6674316328 1166032.0330488305 1493979.6944912414 1383269.5494663552 1590354.7581365686 0.9893535270041363 1.064004305706461 0.8583871373605335 0.8439357957223916 0.8412006593660216 0.9399296979392996 0.7331898918044422 0.9394002733338248 0.869786783350869 1.0 20.60091719063002 -4.767089870642487 24.999777028855124 0.8705409508078598 1.026678932494525 0.41181880835466034 0.0704873878934244 104.18524553300142 460960.1790395811 0.017240353626750644 0.03753595726280404 1.7096614900207968e-05 4.767089870642487 0.15613798168666515 YPQQYQPS(ph)PLPVHYELLTDGYTR ddPTM_KYSE-520_SHP099_60min_R1 2 YPQQYQPSPLPVHYELLTDGYTR 23 0 Q8NDT2;Q8NDT2-2 Q8NDT2 RBM15B Putative RNA-binding protein 15B 1 YPQQYQPS(0.999)PLPVHYELLTDGYTR;YPQQYQPS(1)PLPVHYELLTDGYTR 129.03 3.7011e-05 387310000.0 365800.0 296708.0 228226.0 284826.0 325413.0 310678.0 283667.0 332540.0 378500.0 353056.0 True False 345508.344795779 282453.70231221226 242937.81313451086 311895.7774039402 351021.15175330336 308738.9433618475 312342.82868313114 331386.4963554195 309773.94120853365 349928.1985134116 0.9873692553603586 0.8071761678885868 0.6942504609990722 0.8913136429957823 1.0031233642916886 0.8822922664519548 0.8925911944508812 0.9470128379571517 0.8852500099292827 1.0 18.41669940142174 -5.51236371846833 24.955149095836553 0.9294155650212406 0.8215939899584964 0.2670803004279637 0.07756132317211292 650.1194849552523 1542919.0220498126 0.02253376270400793 0.03110075444008854 3.0735216845193593e-06 5.51236371846833 -0.10782157506274415 YPRPAS(ph)VPPSPS(ph)LSR ddPTM_KYSE-520_SHP099_60min_R1 1 YPRPASVPPSPSLSR 15 1 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 2 YPRPAS(0.972)VPPS(0.197)PS(0.806)LS(0.026)R 86.488 0.0064257 0.0 147270.0 132860.0 139890.0 124700.0 134740.0 134410.0 134690.0 131390.0 151100.0 133540.0 True False 139100.63952453333 126477.20617307442 148907.53323191367 136551.450507578 145343.27143426996 133571.097333142 148305.77964772432 130934.23875665643 123664.04892102894 132356.93949254786 1.0509508610416696 0.9555766902588096 1.1250451529237548 1.0316909036361204 1.0981159884136886 1.0091733598952137 1.1204987076334931 0.9892510302720355 0.9343223664369457 1.0 17.014074311952605 -7.504015610632102 22.84281336367071 0.9653696540525323 1.0536609756340474 0.35472988871247646 0.05078595283407386 241.62322975080838 292605.2870272086 0.02717281469980993 0.012656525638149034 3.133173100983526e-08 7.504015610632102 0.08829132158151509 YPRPASVPPS(ph)PSLSR ddPTM_KYSE-520_SHP099_60min_R1 2 YPRPASVPPSPSLSR 15 1 P13807-2;P13807 P13807-2 GYS1 Glycogen [starch] synthase, muscle 1 YPRPASVPPS(0.993)PS(0.007)LSR;YPRPASVPPS(0.857)PS(0.141)LS(0.002)R 88.176 0.0016524 499280000.0 225120.0 189999.0 165268.0 153546.0 180163.0 201113.0 208920.0 189749.0 235958.0 149184.0 True False 212632.14483440598 180871.16284568654 175921.4397181495 168138.9656747118 194340.80311275355 199857.77916792026 230039.6724627108 189090.8050067495 193113.97521712832 147862.34582339576 1.43804119737401 1.2232401822010583 1.1897649718628638 1.1371317338325884 1.314335992916485 1.351647561486864 1.5557691255450945 1.2788300087744873 1.306038898150448 1.0 17.17389518130113 -5.97453295459843 24.58460328387309 1.332080011815955 1.2393129034907984 0.006105825244644314 0.14726092536608032 509.4085551357763 491754.0773381543 0.045061923661738196 0.05109355609364179 1.06039347184938e-06 5.97453295459843 -0.09276710832515667 YPS(ph)CES(ph)VTDEYAGHLIQILK ddPTM_KYSE-520_SHP099_60min_R1 1 YPSCESVTDEYAGHLIQILK 20 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 2 Y(0.138)PS(0.898)CES(0.899)VT(0.065)DEYAGHLIQILK 133.95 2.3825e-06 52752000.0 194180.0 170700.0 163630.0 184490.0 156000.0 162090.0 151460.0 196770.0 223750.0 186200.0 True False 183408.4483117667 162499.31577407633 174177.85161725665 202023.87413105892 168276.3124814168 161078.33618576737 166771.05490715214 196087.4507964633 183122.6402784923 184550.4128614081 0.9938121810082375 0.8805145068741108 0.9437955131970311 1.0946812364097656 0.9118175888763106 0.8728148243522621 0.9036612398824176 1.0625142894896646 0.9922635091367256 1.0 17.493655439505783 -7.260074584282672 24.991573549348885 1.0205416738857156 0.9425736518507254 0.229217928389142 0.06318596277539115 191.93656284400433 3514742.922207222 0.03345316009631129 0.01799727645330394 5.4944650564828675e-08 7.260074584282672 -0.0779680220349902 YPS(ph)CESVTDEYAGHLIQILK ddPTM_KYSE-520_SHP099_60min_R1 8 YPSCESVTDEYAGHLIQILK 20 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 YPS(0.948)CES(0.026)VT(0.025)DEYAGHLIQILK;YPS(0.914)CES(0.043)VT(0.043)DEYAGHLIQILK;YPS(0.998)CES(0.002)VTDEYAGHLIQILK;YPS(0.85)CES(0.142)VT(0.007)DEYAGHLIQILK;YPS(0.966)CES(0.017)VT(0.017)DEYAGHLIQILK;YPS(0.542)CES(0.181)VT(0.276)DEYAGHLIQILK;YPS(0.994)CES(0.005)VT(0.001)DEYAGHLIQILK;YPS(0.995)CES(0.002)VT(0.003)DEYAGHLIQILK 221.14 4.0567e-19 2655270000.0 1818711.0 1839804.0 1690142.0 1631332.0 1563590.0 1738599.0 1451225.0 1520957.0 2169863.0 1394830.0 True False 1717823.4753195064 1751417.054237894 1799091.257642813 1786373.3028021501 1686635.637389864 1727747.7587404482 1597928.9855911254 1515681.155161032 1775870.5769949052 1382472.8913613176 1.242572990800543 1.2668726202025402 1.3013573494893287 1.2921579250954518 1.2200135336679465 1.2497516367493755 1.1558483320549229 1.0963550639090973 1.284560867769501 1.0 20.39881976053856 -10.894122829847337 0.15661010074402198 0.6877019306880108 1.3324869056015967 0.6465527060670682 0.05531537820143584 24.550401237209524 0.576950086000532 3.1464077587411095 0.3084438592053996 1.2760778495516179e-11 10.894122829847337 0.6447849749135859 YPS(ph)LGQKPGGSDFLMK ddPTM_KYSE-520_SHP099_60min_R1 1 YPSLGQKPGGSDFLMK 16 1 A6NMQ3;Q5T5H1;O43768-2;O43768;O43768-9;O43768-3;O43768-4;A0A1W2PRU0;O43768-6;O43768-5;O43768-7;O43768-8 A6NMQ3 ENSA Alpha-endosulfine 1 YPS(1)LGQKPGGSDFLMK 123.14 7.7407e-05 696530000.0 863000.0 743520.0 650860.0 662710.0 635740.0 812490.0 729110.0 695640.0 768510.0 830370.0 True False 815127.6696521515 707800.183153727 692815.4770128196 725693.7591489739 685769.1211342051 807418.9485321366 802815.5542278735 693226.9872035972 628967.9565605551 823013.5678180838 0.9904182646868886 0.8600103459171365 0.8418032267068983 0.8817518781286712 0.8332415745614844 0.9810518077760364 0.9754584682683204 0.842303230846403 0.7642255014434709 1.0 19.65055668887778 YPS(ph)PPMGSVSAPNLPTAEDNLEYVR ddPTM_KYSE-520_SHP099_60min_R1 1 YPSPPMGSVSAPNLPTAEDNLEYVR 25 0 P46109 P46109 CRKL Crk-like protein 1 Y(0.403)PS(0.479)PPMGS(0.117)VS(0.001)APNLPTAEDNLEYVR 93.633 0.0026465 87537000.0 33464.0 33382.0 24302.0 18906.0 30637.0 35822.0 28069.0 34716.0 48912.0 50850.0 True False 31607.685211169846 31778.27861259644 25868.54580457482 20702.820555703827 33047.95759931521 35598.42161050378 30906.488447041145 34595.57829877533 40030.81377118042 50399.508560701375 0.6271427264633229 0.6305275491788288 0.5132698024906064 0.41077425449038385 0.6557198382105673 0.7063247763146121 0.6132299565940657 0.6864268975382621 0.7942699227506781 1.0 15.621122045804489 -8.062759106634749 0.5612625024688979 1.0098510956461868 0.5613794012162449 0.7584231751736334 0.07358268912448547 0.52423976597241 0.3897731851644108 0.08977170993070283 0.03959572820110355 8.654478300797825e-09 8.062759106634749 -0.44847169442994195 YPS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 5 YPSPQK 6 0 U3KPZ7;Q9P2N5 U3KPZ7 RBM27 RNA-binding protein 27 1 YPS(1)PQK;YPS(1)PQK;YPS(1)PQK;YPS(1)PQK;Y(0.002)PS(0.998)PQK 95.741 0.013584 11514700000.0 12300100.0 12011800.0 11584400.0 9882700.0 10549000.0 10855700.0 10797600.0 11190900.0 13676300.0 11144900.0 True False 11617788.933358539 11434735.097920632 12331148.959695363 10821948.836657906 11379146.284400443 10787945.54958255 11889126.78242087 11152081.379875688 11193028.671467023 11046164.856601002 1.0517486461752328 1.0351769366439816 1.1163285284780515 0.9797019125774582 1.030144528179883 0.9766236236403675 1.0763126330960133 1.009588533635852 1.0132954574526614 1.0 23.397042228149584 -5.27373618163537 24.999502648898435 1.01456955925821 1.0644939308895773 0.375256295437566 0.0326464337847015 847.7847865591287 1723550.6450845038 0.008953045117636931 0.013403280199497753 5.3243159419999174e-06 5.27373618163537 0.049924371631367315 YPS(ph)SISSS(ph)PQKDLTQAK ddPTM_KYSE-520_SHP099_60min_R1 1 YPSSISSSPQKDLTQAK 17 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 YPS(0.499)S(0.499)IS(0.01)S(0.241)S(0.751)PQKDLTQAK 145.9 5.4048e-06 1212100000.0 2052800.0 1938000.0 1788900.0 1902000.0 1754400.0 1669700.0 1608200.0 1914200.0 2356500.0 2006200.0 True False 1938927.0918446535 1844895.5710026931 1904215.3563412023 2082765.5081428483 1892461.2988294717 1659278.7829562349 1770772.550519489 1907560.086977639 1928619.0025308046 1988426.6287999805 0.9751061788057023 0.9278167694405156 0.9576492935474316 1.0474439830851598 0.9517380583318661 0.8344681965749036 0.8905395476362906 0.9593313926442714 0.9699221357213115 1.0 20.923195898266737 -3.377097672958779 4.063075118606919 0.9457329609634174 10.995853626630307 0.017476159038642525 0.05476609705970781 10492.759436173033 433.86406491897816 0.015196324534264212 977470.3912429924 0.00041966459068499255 3.377097672958779 10.05012066566689 YPSCES(ph)VTDEYAGHLIQILK ddPTM_KYSE-520_SHP099_60min_R1 1 YPSCESVTDEYAGHLIQILK 20 0 Q9UKA4 Q9UKA4 AKAP11 A-kinase anchor protein 11 1 Y(0.002)PS(0.131)CES(0.433)VT(0.433)DEYAGHLIQILK 119.96 9.7966e-06 50637000.0 107720.0 111250.0 101040.0 105630.0 104240.0 103120.0 94309.0 94820.0 134770.0 85763.0 True False 101744.55686550376 105905.38301034558 107553.2000697159 115669.04344118234 112443.09495553139 102476.38982957808 103842.67408714244 94491.09155115433 110299.16527522879 85003.20654260428 1.1969496328883615 1.2458986821545956 1.2652840339124074 1.360760942391133 1.3228100389268729 1.2055591076816154 1.2216324337729032 1.1116179658916119 1.2975882882717604 1.0 16.375229644045188 -9.274641339960583 0.37749123697137776 0.9416540895500559 1.2750876833854068 0.5609371664151397 0.06624030994796062 4.905753495265841 0.799557391271791 0.47276099997792786 0.05302093161984035 5.313230537198331e-10 9.274641339960583 0.33343359383535087 YPSPPMGS(ph)VSAPNLPTAEDNLEYVR ddPTM_KYSE-520_SHP099_60min_R1 1 YPSPPMGSVSAPNLPTAEDNLEYVR 25 0 P46109 P46109 CRKL Crk-like protein 1 Y(0.287)PS(0.329)PPMGS(0.378)VS(0.006)APNLPTAEDNLEYVR 63.979 0.019252000000000002 124200000.0 23602.0 16104.0 15176.0 20783.0 11309.0 32412.0 22452.0 23394.0 19137.0 21651.0 True False 22292.750010579464 15330.339667403186 16154.26924245854 22758.210071363206 12198.953960591949 32209.704685379056 24721.667270403916 23312.851674200636 15662.203204511767 21459.188984223118 1.0388440134885426 0.7143951096508873 0.7527902967039073 1.0605344912193622 0.5684722740249256 1.5009749300898445 1.1520317607799337 1.086380836262747 0.7298599782138403 1.0 14.389307932319133 -6.242300063947701 24.999111374342064 1.102884761263835 0.8296016133722782 0.2638720002478211 0.22256907319868888 1158.455818154562 1513135.6567005303 0.07332722317990922 0.0732144393613926 5.724004098513466e-07 6.242300063947701 -0.27328314789155683 YPSS(ph)ISS(ph)SPQKDLTQAK ddPTM_KYSE-520_SHP099_60min_R1 1 YPSSISSSPQKDLTQAK 17 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 YPS(0.104)S(0.896)IS(0.189)S(0.744)S(0.067)PQKDLTQAK 155.49 1.3524000000000002e-06 2099300000.0 2320900.0 2047500.0 2038400.0 2084300.0 1893200.0 1979700.0 1751300.0 2159400.0 2459300.0 1951200.0 True False 2192155.0504005537 1949135.0266398448 2169798.5255553164 2282391.2453323556 2042184.0691655043 1967343.9579675712 1928338.4950409066 2151909.5454077492 2012753.1139079153 1933913.8860106287 1.1335329180156193 1.0078706403316722 1.1219726696472934 1.1801928006425264 1.0559850073667036 1.0172862257201658 0.9971170427959317 1.1127225265685499 1.0407666693266886 1.0 20.883092124743172 -5.982065947721042 24.99908247369722 1.0381548875733042 1.1060455278080328 0.34318845496742156 0.05028708825727198 326.84376724000754 455599.5481590076 0.016217467424819026 0.01838528297501568 1.0421591652586605e-06 5.982065947721042 0.06789064023472857 YPSS(ph)ISSS(ph)PQKDLTQAK ddPTM_KYSE-520_SHP099_60min_R1 3 YPSSISSSPQKDLTQAK 17 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 2 YPS(0.027)S(0.971)IS(0.172)S(0.172)S(0.658)PQKDLTQAK;YPS(0.104)S(0.896)ISS(0.025)S(0.975)PQKDLTQAK;YPS(0.089)S(0.911)ISS(0.02)S(0.98)PQKDLTQAK 191.22 1.6732e-12 3712540000.0 6535510.0 5902110.0 5448850.0 5619740.0 5547490.0 5837500.0 5034730.0 5616080.0 6858620.0 6307250.0 True False 6172972.232083818 5618563.776352279 5800091.589468249 6153838.39996356 5984045.902099582 5801065.997189321 5543689.642629646 5596599.1292829225 5613267.499740222 6251372.671966253 0.9874586840368652 0.8987728089781383 0.927810881516993 0.9843979431205442 0.9572371087288597 0.9279667525188038 0.886795578111964 0.8952592371240949 0.8979255907926336 1.0 22.575741579835054 -6.505826235854267 6.478324680191766 0.9106602002208015 0.9482978071322475 0.11108233113507959 0.03839513746034945 0.2913110355313057 52.398839104946305 0.013815098573941921 0.011537113067589163 3.120137722489481e-07 6.505826235854267 0.03763760691144602 YPSSISS(ph)SPQK ddPTM_KYSE-520_SHP099_60min_R1 4 YPSSISSSPQK 11 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPSSIS(0.016)S(0.492)S(0.492)PQK;YPSSIS(0.011)S(0.494)S(0.494)PQK;YPS(0.001)S(0.003)IS(0.089)S(0.633)S(0.275)PQK;YPSSIS(0.136)S(0.432)S(0.432)PQK 187.11 9.620100000000001e-07 12654740000.0 9046900.0 8498100.0 6480300.0 7128800.0 7148200.0 9105000.0 8555000.0 9738900.0 8868300.0 8808000.0 True False 8545050.422451973 8089838.520091843 6898030.506846596 7806319.008648133 7710722.672305536 9048172.31767174 9419822.888754029 9705118.028976338 7258040.271650289 8729967.972520309 0.9788180723399664 0.9266744787101822 0.790155305100754 0.8941978977724105 0.8832475327030873 1.0364496577940558 1.0790214716027833 1.1117014471903621 0.8313936883270054 1.0 23.05754493039872 -6.259799313965031 24.92432181314518 1.0229013604433101 0.890572636734116 0.3316246611469449 0.08225520113342402 156.56419991018348 2379338.2857759264 0.02815658351619695 0.02677321165417843 5.497948735485186e-07 6.259799313965031 -0.13232872370919413 YPSSISS(ph)SPQKDLTQAK ddPTM_KYSE-520_SHP099_60min_R1 2 YPSSISSSPQKDLTQAK 17 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPSS(0.002)IS(0.089)S(0.454)S(0.454)PQKDLTQAK;YPSSIS(0.002)S(0.848)S(0.15)PQKDLTQAK 217.42 2.9194999999999998e-18 6881400000.0 9233300.0 8332700.0 7486000.0 6354100.0 6221100.0 8508900.0 7362100.0 7663700.0 10447300.0 8012600.0 True False 8721110.44287277 7932384.584362299 7968559.53802349 6957991.753570171 6710665.176782964 8455792.798883798 8106332.915171959 7637116.413421034 8550333.675001081 7941614.597708469 1.0981533207855771 0.9988377661453336 1.0033928793677291 0.8761432159623913 0.8450001059884356 1.0647447940024304 1.0207411623212008 0.9616578995944606 1.0766492845759923 1.0 22.92100091866979 YPSSISSS(ph)PQK ddPTM_KYSE-520_SHP099_60min_R1 5 YPSSISSSPQK 11 0 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPSSIS(0.004)S(0.389)S(0.608)PQK;YPSSISS(0.025)S(0.975)PQK;YPSSISS(0.022)S(0.977)PQK;YPSSIS(0.004)S(0.077)S(0.919)PQK;YPSSIS(0.041)S(0.081)S(0.878)PQK 206.74 4.7339000000000005e-08 28024300000.0 12013100.0 10908800.0 8074800.0 9275900.0 8980600.0 11792900.0 11243800.0 12563800.0 11343400.0 11868900.0 True False 11346709.395478869 10384724.873557372 8595314.528136803 10157478.747098971 9687322.127375726 11719296.136745853 12380433.032913212 12520219.110212967 9283724.5038438 11763750.779864484 0.9645486042513373 0.8827732810637631 0.7306610526677461 0.8634557920493435 0.8234892347394086 0.9962210485456117 1.0524222473417473 1.064305028600512 0.7891806514410658 1.0 23.48784478975604 -6.265870548125833 24.76696025690251 0.9889446448298199 0.8484263323739192 0.3364109414295524 0.08897747785946297 378.0843401459348 2113205.3721680283 0.031273081266747604 0.028521880187854183 5.421624708312903e-07 6.265870548125833 -0.14051831245590074 YPSSISSS(ph)PQKDLTQAK ddPTM_KYSE-520_SHP099_60min_R1 2 YPSSISSSPQKDLTQAK 17 1 F8W726;Q14157-4;Q14157-1;Q14157-3;Q14157;Q14157-5 F8W726 UBAP2L Ubiquitin-associated protein 2-like 1 YPSSIS(0.003)S(0.022)S(0.974)PQKDLTQAK;YPSS(0.001)IS(0.061)S(0.046)S(0.893)PQKDLTQAK 161.47 2.9884e-08 6977100000.0 5569200.0 5693600.0 4426900.0 3932800.0 3806300.0 5392100.0 4383100.0 4669400.0 5670900.0 4757600.0 True False 5260265.374075036 5420070.909732167 4712265.057290432 4306572.129560561 4105834.1551154987 5358445.903802068 4826186.522933703 4653202.941246154 4641207.511755541 4715451.365356785 1.115538040052933 1.1494278044201751 0.9993242835479628 0.9132894808755413 0.8707192243101077 1.1363590648329445 1.0234834693430326 0.9867990528822003 0.9842551968308496 1.0 22.16896444232319 -4.785029707772335 7.903500063762961 0.9880930609546015 1.132637690327314 0.4302525302497434 0.0659187164611374 0.1614358243769371 42.86575992629477 0.018509721256051253 0.040318026451891094 1.6404775530296246e-05 4.785029707772335 0.14454462937271262 YPTEGISHVTS(ph)PSSDVIQK ddPTM_KYSE-520_SHP099_60min_R1 2 YPTEGISHVTSPSSDVIQK 19 0 Q6P2H3-2;Q6P2H3 Q6P2H3-2 CEP85 Centrosomal protein of 85 kDa 1 YPTEGISHVT(0.004)S(0.996)PSSDVIQK;YPTEGISHVT(0.024)S(0.975)PS(0.001)SDVIQK 188.26 6.1657e-13 2590000000.0 1324250.0 1614020.0 1258360.0 1555230.0 1115140.0 1804800.0 1419340.0 1559420.0 1917380.0 1844630.0 True False 1250791.2126730727 1536480.0565065898 1339475.8990471878 1703038.5916030495 1202895.1737213288 1793535.573743431 1562820.7386235138 1554010.7359913646 1569232.1252164259 1828288.0133004233 0.6841324799888318 0.8403927856710813 0.7326394360750457 0.9314936045162416 0.6579352733106114 0.9809918134866195 0.8548000792294819 0.8499813621739314 0.8583068497964115 1.0 20.802061927811017 -1.000000431516652 0.053387236087680597 1.2721824476850954 7.656394015538977e-11 0.3770746504225141 0.08769754386228154 467.15014249097993 1.8805472689916096 10.03510202786015 47.89334234096874 0.09999990063966835 1.000000431516652 -1.2721824476085315 YQDEVFGGFVTEPQEES(ph)EEEVEEPEER ddPTM_KYSE-520_SHP099_60min_R1 12 YQDEVFGGFVTEPQEESEEEVEEPEER 27 0 Q13283 Q13283 G3BP1 Ras GTPase-activating protein-binding protein 1 1 YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER;YQDEVFGGFVTEPQEES(1)EEEVEEPEER 233.72 6.1852e-31 17875480000.0 8437680.0 8943180.0 7522620.0 6833310.0 6825200.0 8410490.0 7084120.0 8100730.0 9730400.0 8924530.0 True False 7969625.070301938 8513536.208813148 8007540.121817559 7482745.727890438 7362304.40992415 8357997.012197135 7800251.983948588 8072630.45835459 7963604.643422751 8845465.60737927 0.9009842357708486 0.9624746267410488 0.9052706185570742 0.8459414190303344 0.8323252541711538 0.9448905668939046 0.8818362232329839 0.9126292291069509 0.9003036128227289 1.0 23.076506654781177 -9.211162444613509 0.8407824221741641 1.0032087428879672 0.8968937461672362 0.4013036360356085 0.03725914701711081 11.708527419701907 6.883879249507784 0.1694571320248132 0.013231991906738724 6.149468134151302e-10 9.211162444613509 -0.10631499672073108 YQEQGGEAS(ph)PQR ddPTM_KYSE-520_SHP099_60min_R1 6 YQEQGGEASPQR 12 0 Q9UJU6;H0Y5J4;Q9UJU6-5 Q9UJU6 DBNL Drebrin-like protein 1 YQEQGGEAS(1)PQR;YQEQGGEAS(1)PQR;YQEQGGEAS(1)PQR;YQEQGGEAS(1)PQR;YQEQGGEAS(1)PQR;YQEQGGEAS(1)PQR 180.3 5.7979e-07 5912900000.0 5297470.0 4612660.0 4323810.0 3728680.0 4295190.0 4188090.0 3820680.0 4262510.0 4784000.0 4125150.0 True False 5003608.778855362 4391060.889856183 4602529.71094061 4083052.6261314843 4633197.016711911 4161950.5768168946 4206911.620643458 4247724.347687317 3915346.1948259547 4088604.3803181346 1.2237938214178674 1.0739754892877442 1.1256970063174678 0.9986421395492859 1.1331976845241754 1.0179391767156138 1.02893584933158 1.0389179173546748 0.9576241256487872 1.0 21.963177041538916 -1.0000000000000002 0.3277981844329369 1.0020164620088294 2.968357580523948 0.632036897477313 0.04608629204208374 37.82564042452324 0.5393922272941798 0.04021202445368955 44.95587127611889 0.09999999999999995 1.0000000000000002 1.9663411185151187 YQEQGGEASPQS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 YQEQGGEASPQSR 13 0 B4DDD6;Q9UJU6-6;Q9UJU6-2;Q9UJU6-3;Q9UJU6-4 B4DDD6 DBNL Drebrin-like protein 1 YQEQGGEAS(0.38)PQS(0.62)R 146.27 3.8937e-05 260560000.0 337480.0 322310.0 303600.0 252100.0 277800.0 286420.0 267010.0 295660.0 346080.0 285810.0 True False 318759.31165029865 306825.74380282685 323170.5417771749 276059.50820337125 299661.2795342156 284632.3465378955 294001.9765664771 294634.42446756293 283240.59596684104 283277.9457568149 1.1252528353334763 1.0831261254140376 1.1408249269592152 0.9745181802481706 1.0578348368547732 1.0047811727011156 1.0378569209862474 1.04008952649105 0.9998681514373663 1.0 18.11185876134238 -5.254634069280475 24.9980533502626 1.0202253672799202 1.1130737816382834 0.7464024894368199 0.02662029665988053 267.2324298461516 981626.8868269252 0.00681188519992165 0.011461965381358094 5.563728521476591e-06 5.254634069280475 0.09284841435836322 YQES(ph)PGIQMK ddPTM_KYSE-520_SHP099_60min_R1 1 YQESPGIQMK 10 0 E9PJ60;Q9UHI6 E9PJ60 DDX20 Probable ATP-dependent RNA helicase DDX20 1 YQES(1)PGIQMK 91.584 0.036724 0.0 1202300.0 1073700.0 1005400.0 1050200.0 1059000.0 1198100.0 992640.0 1161700.0 1294800.0 1013700.0 True False 1135606.0222743694 1022117.8403434431 1070209.6926968761 1150010.6922458557 1142337.2751142345 1190622.2134873718 1092985.7384328223 1157670.3338428177 1059696.9592518087 1004719.4066466666 1.1302718099818014 1.0173167091047293 1.06518266255928 1.1446088177833758 1.136971444521888 1.1850295770250632 1.0878517237770413 1.1522324802171757 1.0547193099301568 1.0 19.938361217831947 -3.9296491233776396 21.560712967955798 1.101505982442801 2.0758602295719277 0.01919106534115389 0.05809572715138487 4160.374948904377 1407004.1736187015 0.01414405053281762 20212.174635074723 0.00011758471655805476 3.9296491233776396 0.9743542471291267 YQLDKDGVVLFK ddPTM_KYSE-520_SHP099_60min_R1 4 YQLDKDGVVLFK 12 1 H7BZ94;P07237;I3L398;I3L312;I3L3U6 H7BZ94 P4HB Protein disulfide-isomerase 0 ;;; 154.07 1.3067e-05 2915749000.0 5398520.0 5116030.0 3453980.0 3542480.0 5874740.0 5284950.0 4058030.0 3791920.0 4292940.0 4221960.0 False True 5099053.333917192 4870248.239482409 3676629.0773634017 3879156.2341145477 6337048.615301788 5251964.6666973345 4468255.274956229 3778766.714560784 3513450.3122107326 4184556.719035172 1.2185408577979258 1.1638624032333194 0.8786185309996509 0.9270172433004947 1.514389466027578 1.2550826812327862 1.0677965612535583 0.9030267644291962 0.8396230588125053 1.0 21.99664337176014 -7.133975714312849 3.6717112409378596 0.9034059004151174 1.152977448216193 0.2934809605407296 0.16917343725280315 0.3465452107628942 8.319208555948638 0.09586806233023959 0.05217552284263382 7.345549432191217e-08 7.133975714312849 0.2495715478010756 YQPLASTAS(ph)DNDFVTPEPR ddPTM_KYSE-520_SHP099_60min_R1 10 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLAST(0.002)AS(0.998)DNDFVTPEPR;YQPLASTAS(1)DNDFVTPEPR;YQPLASTAS(1)DNDFVTPEPR;YQPLASTAS(1)DNDFVTPEPR;YQPLASTAS(1)DNDFVTPEPR;YQPLAST(0.001)AS(0.999)DNDFVTPEPR;YQPLAST(0.015)AS(0.985)DNDFVTPEPR;YQPLASTAS(1)DNDFVTPEPR;YQPLAS(0.029)T(0.097)AS(0.874)DNDFVTPEPR;YQPLAS(0.004)T(0.098)AS(0.898)DNDFVTPEPR 422.46 1.0469999999999999e-107 4990680000.0 2095279.0 2109671.0 1992005.0 1846716.0 1933381.0 2062696.0 1777129.0 2118370.0 2540922.0 2169898.0 True False 1979049.6970348682 2008319.2384792708 2120412.8296206924 2022227.3334045878 2085527.085266886 2049821.9491457662 1956778.5424276518 2111021.868901277 2079554.6162310964 2150674.3918750994 0.9201995915845739 0.933809062899701 0.985929268340791 0.9402759157984287 0.969708428735503 0.953106596186602 0.9098441632169171 0.9815627492829118 0.9669314072308286 1.0 21.036357689257088 -13.999999992705643 0.13700329349021925 1.1711141078303025 0.9329667080743588 0.33693523321903174 0.022963108736744727 178.5600419412462 1.510343365348297 8.281581377591294 0.15552291506343852 1.0000000167958781e-14 13.999999992705643 -0.23814739975594368 YQPLASTASDNDFVT(ph)PEPR ddPTM_KYSE-520_SHP099_60min_R1 1 YQPLASTASDNDFVTPEPR 19 0 Q15021 Q15021 NCAPD2 Condensin complex subunit 1 1 YQPLASTASDNDFVT(1)PEPR 240.68 1.9413e-25 227070000.0 156000.0 216510.0 169940.0 125460.0 119810.0 169460.0 130360.0 153830.0 186220.0 191920.0 True False 147346.36902170972 206108.53461186468 180894.60431361388 137383.68067907562 129238.36537434967 168402.3372820047 143538.06099099672 153296.39963419182 152407.1422241827 190219.73811150054 0.7746113546604724 1.0835286424958206 0.9509770442832773 0.722236724974071 0.679416167099307 0.8853042221270055 0.7545907823028304 0.8058911296804253 0.8012162341157606 1.0 17.53730742935306 -5.2429565447474635 23.575435510983482 0.7946320078016282 0.9510880366524547 0.2189495489902119 0.10925712814861106 481.1999829195845 613782.7190524932 0.028279683941053898 0.04883876025251243 5.715358213517957e-06 5.2429565447474635 0.15645602885082643 YQQITPVNQS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 YQQITPVNQSR 11 0 Q9NYL2 Q9NYL2 ZAK Mitogen-activated protein kinase kinase kinase MLT 1 YQQITPVNQS(1)R 90.689 0.0029048000000000004 458260000.0 1096000.0 944850.0 1088400.0 1117800.0 1153100.0 1123800.0 1031300.0 1244300.0 1360400.0 986160.0 True False 1035202.6951781671 899457.9877512355 1158560.0055015732 1224035.375921175 1243842.4097584744 1116785.9473475558 1135553.8685180636 1239983.8137218035 1113385.6528932338 977423.3896208707 1.059113896977346 0.9202337465037778 1.185320525172784 1.252308251387315 1.272572789813168 1.1425815661938905 1.1617829904382886 1.268625067589979 1.1391027314428204 1.0 19.89862410294844 -4.775232617366708 24.82338839474206 1.1915983434447452 0.9896738555875748 0.44533928467565376 0.08283492742839034 144.256453272408 259616.2272018389 0.02053269715695017 0.04310287527506799 1.6779050557370884e-05 4.775232617366708 -0.20192448785717043 YQQPFEDFRIS(ph)QEHLADHFDSR ddPTM_KYSE-520_SHP099_60min_R1 9 YQQPFEDFRISQEHLADHFDSR 22 1 V9GY71;V9GYH5;P19174;P19174-2 V9GY71 PLCG1 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 1 YQQPFEDFRIS(1)QEHLADHFDSR;YQQPFEDFRIS(1)QEHLADHFDSR;YQQPFEDFRIS(1)QEHLADHFDSR;YQQPFEDFRIS(1)QEHLADHFDSR;YQQPFEDFRIS(1)QEHLADHFDSR;YQQPFEDFRIS(1)QEHLADHFDSR;YQQPFEDFRIS(1)QEHLADHFDSR;YQQPFEDFRIS(1)QEHLADHFDSR;YQQPFEDFRIS(1)QEHLADHFDSR 218.16 1.0434e-19 11305240000.0 4546725.0 4955089.0 5148385.0 5385605.0 4144346.0 3785070.0 3401953.0 3380154.0 5151872.0 2908278.0 True False 4294509.100578422 4717039.0866997745 5480258.134807248 5897451.27995882 4470482.452096864 3761445.9741295753 3745855.609101752 3368429.0347078703 4216421.91292441 2882512.9195260485 1.4898490381387564 1.636432938338873 1.901208524577343 2.0459409704670106 1.5508976288758192 1.3049190338921512 1.2995104319316135 1.1685737857028295 1.4627590684373017 1.0 21.45889564342651 -6.123287387262022 3.2449809622275363 1.2585349507067094 1.7708204574480484 0.6544969741328579 0.17807889373215813 0.17011426369992558 3.3648516473728436 0.06433207183418224 0.0650109829019546 7.528572079328573e-07 6.123287387262022 0.512285506741339 YQVS(ph)DGSLTVTSVSR ddPTM_KYSE-520_SHP099_60min_R1 2 YQVSDGSLTVTSVSR 15 0 H0YDP1;Q9UPX0;Q9UPX0-2 H0YDP1 IGSF9B Protein turtle homolog B 1 Y(0.01)QVS(0.492)DGS(0.492)LT(0.006)VTSVSR;Y(0.001)QVS(0.479)DGS(0.479)LT(0.036)VT(0.005)SVSR 81.128 0.007704399999999999 2688000000.0 154094.0 169453.0 157067.0 130728.0 275470.0 170379.0 175401.0 200225.0 213995.0 156071.0 True False 145546.09864122662 161312.2235258613 167191.7901360857 143152.3498151935 297147.9217901025 169315.6014621189 193132.24482879566 199530.46620786653 175138.902374954 154688.33236140056 0.9408990091197388 1.0428208841826885 1.0808299991590389 0.9254243525021953 1.9209459256168822 1.094559614661463 1.2485249655260233 1.289886982178466 1.1322049937533392 1.0 17.239004857525288 YQYGGLNSGRPVT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 2 YQYGGLNSGRPVTPPR 16 1 P62140 P62140 PPP1CB Serine/threonine-protein phosphatase PP1-beta catalytic subunit 1 YQYGGLNSGRPVT(1)PPR;YQYGGLNSGRPVT(1)PPR 125.23 0.00027212 11041300000.0 1615750.0 1964590.0 1424360.0 1164030.0 1242230.0 1878080.0 1410600.0 1486600.0 1954080.0 1610940.0 True False 1526121.1265822286 1870208.1474902888 1516176.5246565794 1274659.0612216184 1339986.433678144 1866358.2060815985 1553197.2141293338 1481443.3315750477 1599268.3303481399 1596668.324892356 0.9558159968414958 1.1713191264167993 0.9495876513732411 0.7983242614320374 0.8392390659897903 1.1689078921305867 0.9727738628710174 0.9278341083611861 1.0016283942101496 1.0 20.606633222881428 -4.822937558549334 24.997707190459348 0.9529270403161368 1.0635689957255556 0.1375998255989741 0.1059801488574101 117.24116107082621 47655.067498911245 0.02901450748339509 0.060398566904747576 1.5033580984989733e-05 4.822937558549334 0.11064195540941879 YRCS(ph)PER ddPTM_KYSE-520_SHP099_60min_R1 2 YRCSPER 7 1 A1L390-3;A1L390;A0A0U1RR71 A1L390-3 PLEKHG3 Pleckstrin homology domain-containing family G member 3 1 YRCS(1)PER;Y(0.003)RCS(0.997)PER 62.005 0.060195000000000005 1461810000.0 1629810.0 1447900.0 1493040.0 1327061.0 1545610.0 1512510.0 1288820.0 1232830.0 1734340.0 1403390.0 True False 1539401.190354314 1378340.7106577933 1589283.7473484634 1453184.4784445632 1667240.7136820701 1503069.8640529038 1419106.5032710668 1228553.6004746843 1419427.575153522 1390957.056420898 1.1067208604666636 0.990929737402844 1.1425829000342282 1.0447371266685859 1.1986284594379093 1.0806011998102125 1.0202374665128777 0.8832433717514632 1.020468294546693 1.0 20.40764644898508 -6.905465334005328 3.5764119229398057 0.9618934563637475 1.094101060363659 0.45905690863277393 0.0617040764682971 0.20000808800090225 4.977123987539923 0.027463316138031796 0.01758648880032606 1.2431818644043495e-07 6.905465334005328 0.1322076039999115 YRDELKR ddPTM_KYSE-520_SHP099_60min_R1 2 YRDELKR 7 2 B1AHB1;P33992 B1AHB1 MCM5 DNA helicase;DNA replication licensing factor MCM5 0 ; 143.61 0.0010316 2236920000.0 1684540.0 1570180.0 1184860.0 1099110.0 1709010.0 1594950.0 1173880.0 1293290.0 1362320.0 1053320.0 False True 1591095.208152762 1494746.1959117698 1261237.9714430308 1203569.0839405276 1843499.3640632466 1584995.3254333364 1292547.2463647677 1288803.878846154 1114957.0292924936 1043988.4042705605 1.5240544834063243 1.4317651324452745 1.2080957664699958 1.1528567549382571 1.7658236016053341 1.5182116189698294 1.2380858265067383 1.2345001856094822 1.067978365211364 1.0 19.993674257099535 -7.446678287554873 1.4786608505596037 1.0189337132705811 1.418336815973326 0.4613821241304662 0.16610075098419969 0.42863526654647943 1.6500628809425792 0.15896878343417548 0.05446294577417873 3.5753759330168556e-08 7.446678287554873 0.3994031027027449 YRDYYR ddPTM_KYSE-520_SHP099_60min_R1 2 YRDYYR 6 1 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 0 ; 108.98 0.010133 1571850000.0 869660.0 844940.0 675060.0 645580.0 879900.0 818650.0 753720.0 731680.0 777920.0 607450.0 False True 821418.2261757712 804347.8141192027 718575.447734189 706935.729099296 949143.1240538387 813540.5016872017 829913.3731983268 729141.9728553967 636669.3377673512 602068.4655889494 1.3643269380871024 1.3359739964663015 1.1935111848637867 1.1741783028077453 1.5764704154126017 1.35124250510511 1.3784368732657295 1.2110615561672753 1.0574699957828797 1.0 19.19956803010821 -7.655453290316258 2.3672462420797094 1.006901210092425 1.3364094630006218 0.585845958614784 0.10412351881704739 0.22651029967895212 2.3431625620609506 0.0998190519773242 0.030076568211088964 2.210786020229389e-08 7.655453290316258 0.32950825290819674 YREPPPT(ph)PPGYLGISLADLK ddPTM_KYSE-520_SHP099_60min_R1 2 YREPPPTPPGYLGISLADLK 20 1 E9PCH4;Q8TEU7;A0A5F9ZHG7;Q8TEU7-4 E9PCH4 RAPGEF6 Rap guanine nucleotide exchange factor 6 1 YREPPPT(1)PPGYLGISLADLK;YREPPPT(1)PPGYLGISLADLK 190.93 1.5364e-12 734400000.0 570280.0 763070.0 505600.0 486220.0 551200.0 824950.0 634510.0 786810.0 935500.0 836850.0 True False 538645.4315750045 726410.9718085787 538191.7849886026 532430.2026126271 594576.3041010061 819801.1810503341 698652.4630208436 784080.7397528348 765636.7820358864 829436.1600594483 0.6494115611458247 0.8757888874250606 0.6488646274476733 0.6419182430802945 0.7168439630825728 0.9883837003098301 0.842322166145697 0.9453177682736152 0.923081026490346 1.0 19.66177141871622 -6.250414299674543 24.15239743628625 0.9303096176663197 0.7091696197219634 0.7083635349350934 0.07469938563744909 271.91713071377524 595682.7699017798 0.024778183743029793 0.024534356771308503 5.618051297118295e-07 6.250414299674543 -0.22113999794435635 YREQEYR ddPTM_KYSE-520_SHP099_60min_R1 2 YREQEYR 7 1 E9PG73;Q13427 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 0 ; 160.63 0.001091 662470000.0 692580.0 678020.0 428240.0 430240.0 650620.0 645360.0 504310.0 591590.0 509530.0 478350.0 False True 654161.2067759994 645446.9014712312 455845.0356082268 471129.88024362695 701820.0924785866 641332.0688558634 555290.5763912976 589537.912368144 417012.1962060344 474112.19115066895 1.3797603583834281 1.3613800984630524 0.9614708166476212 0.9937096936912676 1.4802827380904744 1.352701071236646 1.1712218895776736 1.2434565560048925 0.8795643815737937 1.0 18.854868964920406 -7.754918363053131 24.898351456688783 0.9397821571841612 1.2384238996381245 0.36554272082642225 0.15969692676574382 154.06159522589803 588251.1564781322 0.12253052985234972 0.043855873672802644 1.7582540924977036e-08 7.754918363053131 0.29864174245396324 YREYAER ddPTM_KYSE-520_SHP099_60min_R1 1 YREYAER 7 1 Q6UN15;Q6UN15-3;Q6UN15-5;H0Y8P7 Q6UN15 FIP1L1 Pre-mRNA 3-end-processing factor FIP1 0 113.26 0.0031316 257410000.0 248310.0 203380.0 137430.0 141650.0 204210.0 178700.0 171700.0 157330.0 179880.0 170190.0 False True 234535.74930628698 193609.31952039627 146288.95769577473 155112.37341137457 220280.1652040395 177584.6670146008 189057.11163051624 156784.25895109808 147218.32640578857 168682.24900581632 1.3903997052956056 1.1477753033380556 0.867245715289998 0.9195536241992254 1.3058882395885298 1.0527762586831382 1.1207884216909947 0.9294650733859495 0.8727552974510812 1.0 17.3639486364517 -4.381898769393383 3.438350675773152 1.018476520378834 1.3972243950963006 0.45965111151004245 0.12596604418059765 0.24971120303852734 4.775888706037038 0.03415219538651397 0.1986012823169043 4.1505077641115206e-05 4.381898769393383 0.3787478747174666 YRGDYDR ddPTM_KYSE-520_SHP099_60min_R1 7 YRGDYDR 7 1 Q1KMD3;H3BQZ7 Q1KMD3 HNRNPUL2;HNRNPUL2-BSCL2 Heterogeneous nuclear ribonucleoprotein U-like protein 2 0 ;;;;;; 142.19 0.0017578 19679730000.0 10844560.0 9911370.0 6698170.0 6057010.0 9376800.0 10010080.0 7945360.0 8551400.0 8665798.0 7697890.0 False True 10242990.638705608 9435212.90793032 7129944.755650928 6632666.409293537 10114700.813306097 9947603.37766937 8748554.52804099 8521737.189311774 7092307.5301902965 7629692.683467787 1.342516804235167 1.2366438989573958 0.9344995993220375 0.8693228789758948 1.325702257342932 1.3038013181348826 1.146645728863704 1.116917488403811 0.9295666056849301 1.0 22.86319351721412 -7.703417813340852 0.021485816873085217 5.438026690994168e-06 2.1766978228951372 0.12599423901066553 0.1586125802973565 672.685576159688 12.859875922322594 657.8767105299431 640.2432568407366 1.9796216129024876e-08 7.703417813340852 2.176692384868446 YRLSPT(ph)LSSTK ddPTM_KYSE-520_SHP099_60min_R1 1 YRLSPTLSSTK 11 1 Q8NEM0-2;Q8NEM0-3;Q8NEM0 Q8NEM0-2 MCPH1 Microcephalin 1 Y(0.001)RLS(0.203)PT(0.756)LS(0.024)S(0.012)T(0.002)K 80.187 0.033208999999999995 458750000.0 1050000.0 1113200.0 913820.0 852140.0 838090.0 1004900.0 859130.0 1009400.0 1070100.0 966060.0 True False 991754.4068768932 1059720.2010527344 972726.2993636965 933127.1293947672 904042.9149201968 998628.0463512718 945979.2447007891 1005898.626995731 875796.8150257646 957501.4599833062 1.0357732581360077 1.1067557025669812 1.0159005912958667 0.9745438188794365 0.9441687064748272 1.0429519829334595 0.9879663731450414 1.0505452670675495 0.9146689082239455 1.0 19.868915161275 -4.942203019781821 5.909861203317716 0.9907129301745138 1.070471751460142 0.3869995230219787 0.041417242371944836 0.19103294709220414 13.61530671618749 0.010482450715650075 0.022189867279940566 1.142344197941515e-05 4.942203019781821 0.07975882128562828 YRNEGS(ph)PS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 2 YRNEGSPSPR 10 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 2 Y(0.002)RNEGS(0.998)PS(1)PR;Y(0.001)RNEGS(0.999)PS(1)PR 87.641 0.028035 129950000.0 564350.0 510400.0 479330.0 486740.0 508690.0 521530.0 513380.0 531050.0 578800.0 515580.0 True False 533044.380496167 485879.6178739805 510228.3787551171 532999.6232562828 548721.0089498205 518274.9378182694 565277.4605059667 529207.9114980014 473704.51036063215 511012.36231517047 1.0431144524198577 0.950817736918683 0.9984658227121914 1.0430268669851699 1.0737920438241628 1.0142121326971336 1.1061913608996563 1.0356068669266532 0.9269922712133363 1.0 18.962998667429567 -1.0408191968146534 10.751247946858417 1.0221884596781752 1.0900437906303158 0.0 0.05103568825812472 0.0 0.0 0.011989211924834027 0.0 0.09102921617840688 1.0408191968146534 0.06785533095214058 YRNEGSPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 YRNEGSPSPR 10 1 Q5T200-2;Q5T200 Q5T200-2 ZC3H13 Zinc finger CCCH domain-containing protein 13 1 YRNEGS(0.115)PS(0.885)PR 93.766 0.0020301 748490000.0 566880.0 556090.0 1104800.0 375450.0 421630.0 715470.0 373220.0 336060.0 489430.0 559190.0 True False 535434.0363527368 529374.6016918924 1176017.1757425002 411132.655116841 454809.8822534605 711004.4863398793 410948.7198761868 334894.2862969935 400561.8495262687 554236.0116432365 0.9660758685911542 0.9551429184876794 2.1218707392465617 0.7418006886594883 0.8206068763107063 1.282855085926021 0.741468816971633 0.6042449051696879 0.7227279373973838 1.0 19.0801409278242 -6.062693469410316 0.9940223867036537 0.7686231435883262 1.2551568288985164 0.17490114717676064 0.37898605474949393 0.9169515675956079 1.948276995300324 0.20619104986294348 0.22971671245033937 8.655786396772013e-07 6.062693469410316 0.48653368531019026 YRPCS(ph)LGR ddPTM_KYSE-520_SHP099_60min_R1 4 YRPCSLGR 8 1 P40938-2;P40938 P40938-2 RFC3 Replication factor C subunit 3 1 YRPCS(1)LGR;YRPCS(1)LGR;YRPCS(1)LGR;YRPCS(1)LGR 84.507 0.0038076 1143560000.0 569680.0 545576.0 501054.0 586084.0 567424.0 519958.0 520318.0 463586.0 595157.0 481136.0 True False 538078.7147710752 519365.7100337279 533352.7425547452 641785.2471474203 612077.0405990737 516712.7492533726 572916.821254321 461977.92836778524 487091.49148704694 476873.5093581436 1.1283468345627161 1.0891058107479643 1.1184365079801157 1.3458186176272249 1.2835207420578043 1.0835425728488282 1.2014020699649444 0.9687640837705426 1.0214270281917242 1.0 18.86324711672217 -7.2603384608439265 24.999997743965775 0.9963216584177449 1.1796516848797372 0.5200612358436004 0.08005719646492315 87.78035029462029 1993397.9298219911 0.0442712860854379 0.02370187506708364 5.491127643210831e-08 7.2603384608439265 0.18333002646199226 YRPETK ddPTM_KYSE-520_SHP099_60min_R1 4 YRPETK 6 1 P62424;Q5T8U3 P62424 RPL7A 60S ribosomal protein L7a 0 ;;; 114.19 0.0095074 7267530000.0 3105070.0 2636270.0 1722990.0 1695690.0 2872870.0 2869190.0 2161270.0 2298170.0 2288370.0 2536550.0 False True 2932825.5772964116 2509619.6320780553 1834056.6922814727 1856847.8677722125 3098948.5246056914 2851282.320938012 2379752.2635625307 2290198.18466691 1872859.6931132663 2514078.1404060386 1.1665610269467372 0.9982265832329049 0.729514593363141 0.7385800138544304 1.2326381088955305 1.1341263722525001 0.9465705243267365 0.9109494839715004 0.7449488792781868 1.0 21.261598060381058 -7.283555465193936 3.383459384086633 0.8645355016286923 0.9886985470947471 0.08165602723502385 0.16635963885434946 0.7090272354691532 17.014353635048003 0.10814746891128096 0.05001941675643077 5.205285261255033e-08 7.283555465193936 0.12416304546605483 YRPGTVALR ddPTM_KYSE-520_SHP099_60min_R1 1 YRPGTVALR 9 1 Q71DI3;P68431;K7EK07;Q16695;P84243;Q6NXT2;K7EMV3;A0A590UJJ6;B4DEB1;K7ES00;K7EP01;Q5TEC6 Q71DI3;Q5TEC6 HIST2H3A;HIST1H3A;H3F3B;HIST3H3;H3F3A;H3F3C;HIST2H3PS2 Histone H3.2;Histone H3.1;Histone H3;Histone H3.1t;Histone H3.3;Histone H3.3C 0 97.965 0.0037779000000000003 769970000.0 277490.0 479550.0 198520.0 307510.0 505300.0 517490.0 374950.0 211650.0 332180.0 262940.0 False True 262097.07653739935 456511.6981807753 211316.91684323075 336735.6579437475 545064.2352362827 514260.15295683144 412853.60515935963 210915.8355494812 271864.4855763554 260610.55616422475 1.0057039914079224 1.7517007173458572 0.8108532515086172 1.2921029097975303 2.0914894747886126 1.9732898027076402 1.5841783665094453 0.8093142451857237 1.043182937705098 1.0 17.991535996628883 -7.257219129162323 24.702739052531495 0.9446864311855611 1.5172073869709384 0.3059221186703923 0.37942246800125135 394.5591441856867 2309523.322041242 0.20104115179866214 0.11066270271919336 5.530709793496291e-08 7.257219129162323 0.5725209557853773 YRPLFDYFLK ddPTM_KYSE-520_SHP099_60min_R1 2 YRPLFDYFLK 10 1 A0A0A0MSX9;P41252;J3KR24;Q5TCD1 A0A0A0MSX9 IARS Isoleucine--tRNA ligase, cytoplasmic 0 ; 106.29 0.0024319000000000003 43108000.0 144429.0 139239.0 135965.0 111257.0 204193.0 187604.0 127522.0 102815.0 93795.0 77267.0 False True 136417.2354579265 132549.7494380001 144729.52145169163 121830.83182936329 220261.82740075653 186433.09384782982 140413.1682547856 102458.3587622014 76764.19237953614 76582.47449281639 1.7813114078825274 1.7308104800195971 1.8898517240425237 1.5908448066769023 2.876138814519732 2.4344093747625988 1.8334895703579892 1.3378825826764351 1.0023728390591087 1.0 16.2247266560974 -7.334048778384073 2.4947409595366077 1.027239198514224 2.0484522417505437 0.5904339585280037 0.35523125845895137 0.23909119766524092 2.8330926138783386 0.2748781736646763 0.1110800257564192 4.6339486997900366e-08 7.334048778384073 1.0212130432363198 YRPS(ph)MEGYR ddPTM_KYSE-520_SHP099_60min_R1 4 YRPSMEGYR 9 1 O60716-5;O60716-3;A0A669KB05;O60716-13;O60716-21;O60716-11;O60716-19;O60716-2;O60716-8;O60716-7;A0A669KB62;C9JZR2;O60716;O60716-23;O60716-17;O60716-18;O60716-15;O60716-16;O60716-10;O60716-9;O60716-24;O60716-6;O60716-4;O60716-22;O60716-20;O60716-14;O60716-12 O60716-5 CTNND1 Catenin delta-1 1 YRPS(1)MEGYR;YRPS(0.999)MEGY(0.001)R;YRPS(0.999)MEGY(0.001)R;YRPS(1)MEGYR 133.02 0.00082093 4706600000.0 4480170.0 4109410.0 3705020.0 3952590.0 4218030.0 3813030.0 3744870.0 3757500.0 4545290.0 4069330.0 True False 4231646.0391025245 3911987.7752498384 3943851.517441599 4328242.965210488 4549964.963692251 3789231.4653983377 4123438.006009155 3744466.10950709 3719979.9134365483 4033278.9020908303 1.0491825985326384 0.9699274139514341 0.9778276219373591 1.0731325728470575 1.1281057110465564 0.9394915544853644 1.022353798511575 0.9283925561324258 0.9223215164981848 1.0 21.943521741185247 -6.34684562417995 24.999999029513372 0.9617764017604244 1.0342031250874926 0.36002222008050233 0.05115244165269607 108.05925544178471 31628.961821859724 0.01937214686688551 0.01708462805516179 4.499397636168017e-07 6.34684562417995 0.07242672332706812 YRQDDDQR ddPTM_KYSE-520_SHP099_60min_R1 2 YRQDDDQR 8 1 Q7KZF4;H7C597 Q7KZF4 SND1 Staphylococcal nuclease domain-containing protein 1 0 ; 131.41 0.00086616 1855300000.0 1787250.0 1741310.0 1099920.0 1023740.0 1633240.0 1724870.0 1272950.0 1476810.0 1474250.0 1566680.0 False True 1688107.679705454 1657654.853840402 1170822.6031342233 1121035.9418013457 1761766.696135573 1714104.4465219623 1401632.2087947929 1471687.2908000457 1206563.362818178 1552800.4340585948 1.0871375629984874 1.0675260113804494 0.7540071328251847 0.7219446344893561 1.1345738045234814 1.1038794225744535 0.902648001669674 0.9477633175007933 0.7770241019733309 1.0 20.566440995768975 -6.919109682335675 24.999931514925073 0.9024002989078199 0.9704910577019903 0.0546439618774478 0.142716942843293 115.69497670059873 35747.41805941135 0.0654465436651891 0.04412405229643787 1.2047316434642412e-07 6.919109682335675 0.06809075879417037 YRS(ph)PEPDPYLSYR ddPTM_KYSE-520_SHP099_60min_R1 7 YRSPEPDPYLSYR 13 1 H3BUL5;H3BVF8;P49761-3;P49761-1;P49761;H3BRT8;H3BQR7;H3BV35;H3BRK0;P49761-2;H3BQG1 H3BUL5 CLK3 Dual specificity protein kinase CLK3 1 Y(0.438)RS(0.562)PEPDPYLSYR;Y(0.042)RS(0.926)PEPDPY(0.003)LS(0.026)Y(0.003)R;Y(0.011)RS(0.989)PEPDPYLSYR;YRS(0.992)PEPDPY(0.001)LS(0.007)YR;Y(0.002)RS(0.993)PEPDPY(0.001)LS(0.005)YR;YRS(1)PEPDPYLSYR;Y(0.023)RS(0.977)PEPDPYLSYR 129.36 2.9265e-05 19857040000.0 7988130.0 7440660.0 7398180.0 6792980.0 6960030.0 7607840.0 7035910.0 7262250.0 8807450.0 7141560.0 True False 7545012.504957641 7083199.524941641 7875078.5203065295 7438582.776816094 7507744.763846393 7560356.648575038 7747168.446664326 7237058.949771892 7208239.097746619 7078291.334449606 1.065936982310481 1.0006934145911948 1.112567729725818 1.0509009060722003 1.0606719064114616 1.068104757398053 1.0944969740026576 1.0224302176641944 1.0183586344722158 1.0 22.75496971200225 -7.427136676166886 6.365081495174853 1.0126882457242516 1.0635160426821721 0.4197491633484769 0.027759378213756177 0.23827005323996528 13.109347082836516 0.015396570302061019 0.007223888729636203 3.7399287101260623e-08 7.427136676166886 0.0508277969579205 YRS(ph)PYR ddPTM_KYSE-520_SHP099_60min_R1 1 YRSPYR 6 1 Q14498-3 Q14498-3 RBM39 RNA-binding protein 39 1 YRS(0.955)PY(0.045)R 69.825 0.027311000000000002 2076300000.0 325480.0 289070.0 197260.0 211240.0 331610.0 301220.0 233650.0 275910.0 301070.0 316750.0 True False 307424.97557170567 275182.64329708373 209975.69522715936 231316.18608837796 357705.82039719634 299339.9742481143 257269.62220425214 274952.932607878 246403.27735707557 313943.8414277714 0.9792355670160025 0.8765346121955847 0.6688320250915583 0.7368075291312779 1.1393942902985508 0.9534825492570874 0.819476569548958 0.8758029186284771 0.7848641853793626 1.0 18.26014698597516 -4.270859504711025 6.348306141286757 0.8672862320180366 0.9812796905786114 0.05705593596763525 0.1283311080387984 0.3785500834791378 84.49142632516651 0.0339438673030994 0.18239247199299574 5.359700170350671e-05 4.270859504711025 0.11399345856057486 YRS(ph)PYS(ph)GPK ddPTM_KYSE-520_SHP099_60min_R1 1 YRSPYSGPK 9 1 Q5QP22;Q5QP23;G3XAC6;Q14498-2;Q14498 Q5QP22 RBM39 RNA-binding protein 39 2 Y(0.008)RS(0.691)PY(0.427)S(0.875)GPK 89.62899999999999 0.010083 0.0 1013600.0 890930.0 820360.0 860290.0 789920.0 847620.0 818460.0 910880.0 1090400.0 781480.0 True False 957373.5874384935 848128.3854868067 873241.7182224088 942051.70294438 852082.2099700053 842329.6891713251 901197.9241998394 907720.3698809913 892410.8467471208 774556.6951822393 1.2360277735553504 1.0949855456187845 1.1274083919924682 1.2162462848800657 1.100090174508821 1.0874990745166047 1.1635015613515596 1.1719224370882508 1.1521569076840175 1.0 19.563011318183296 -11.491287080770945 1.6925587314751676 3.7078955849256895e-05 1.14738741634272 0.4734113077642106 0.04738335399336068 763414.8121104878 56928.60288287782 2910926.9238496344 0.011977448008246417 3.2263607022139626e-12 11.491287080770945 1.1473503373868708 YRS(ph)PYSGPK ddPTM_KYSE-520_SHP099_60min_R1 8 YRSPYSGPK 9 1 Q5QP22;Q5QP23;G3XAC6;Q14498-2;Q14498 Q5QP22 RBM39 RNA-binding protein 39 1 Y(0.325)RS(0.674)PY(0.001)SGPK;YRS(0.92)PY(0.065)S(0.015)GPK;Y(0.005)RS(0.995)PYSGPK;Y(0.011)RS(0.899)PY(0.014)S(0.076)GPK;YRS(0.797)PYS(0.203)GPK;Y(0.066)RS(0.933)PY(0.001)SGPK;Y(0.005)RS(0.994)PYS(0.001)GPK;YRS(0.5)PYS(0.5)GPK 168.05 0.00015222 100730100000.0 85421900.0 73998600.0 72062200.0 68141000.0 72723100.0 70218600.0 70299700.0 70129800.0 83422300.0 63541700.0 True False 80683376.92266406 70443596.18183686 76707444.71559668 74617100.15266131 78445994.23216249 69780339.67113288 77406279.73495528 69886536.09221835 68274913.22504798 62978769.97269448 1.2811202403229804 1.1185292474333635 1.2179889310136496 1.1847976736448302 1.2455942576549859 1.1079978173817515 1.229085289670092 1.1096840430913284 1.0840941043251517 1.0 25.90836224493632 -7.8068252831595935 1.0218176427087942 0.9999890295335233 1.1977381491700123 0.614715701176611 0.05156767004183185 0.31513243344599723 0.708158174469466 0.045164487766891005 0.01542747652819594 1.5601800376308064e-08 7.8068252831595935 0.197749119636489 YRSPEPDPYLS(ph)YR ddPTM_KYSE-520_SHP099_60min_R1 3 YRSPEPDPYLSYR 13 1 H3BUL5;H3BVF8;P49761-3;P49761-1;P49761;H3BRT8;H3BQR7;H3BV35;H3BRK0;P49761-2;H3BQG1 H3BUL5 CLK3 Dual specificity protein kinase CLK3 1 YRS(0.075)PEPDPYLS(0.925)YR;YRS(0.002)PEPDPYLS(0.998)YR;YRS(0.133)PEPDPYLS(0.867)YR 138.01 2.0973e-05 5929200000.0 2754320.0 2684430.0 2419270.0 2383340.0 2343530.0 2421760.0 2501230.0 2510340.0 2924770.0 2360580.0 True False 2601532.378999202 2555465.9533884246 2575220.015168862 2609851.917022703 2527952.4781383 2406644.897533741 2754078.7380523984 2501632.2164577637 2393705.495451736 2339667.097703451 1.111924162866072 1.0922348550769447 1.1006779629873937 1.1154800268741045 1.0804752866848728 1.028627064036603 1.177124190341319 1.0692257111763008 1.0230966182331356 1.0 21.15787183816744 -7.724958207487386 3.2805996824411814 1.0054585074072113 1.098867699399215 0.5057148787821093 0.0349282210265491 0.19552467030008644 4.010543884241055 0.030451787515836146 0.00896359370660538 1.8838303633016862e-08 7.724958207487386 0.0934091919920037 YRSPYS(ph)GPK ddPTM_KYSE-520_SHP099_60min_R1 5 YRSPYSGPK 9 1 Q5QP22;Q5QP23;G3XAC6;Q14498-2;Q14498 Q5QP22 RBM39 RNA-binding protein 39 1 YRS(0.025)PYS(0.975)GPK;YRS(0.103)PYS(0.897)GPK;YRS(0.032)PYS(0.968)GPK;YRS(0.425)PYS(0.575)GPK;YRS(0.282)PYS(0.717)GPK 164.9 0.00018169 121679100000.0 64268600.0 58065800.0 51735900.0 51663700.0 57100900.0 52813900.0 52749500.0 55140500.0 65885900.0 50912200.0 True False 60703492.64172218 55276231.80945735 55070878.89436678 56573802.514742255 61594415.97032145 52484268.85977856 58081934.24550915 54949230.475389495 53922681.40837865 50461157.517092206 1.2029746369008814 1.09542139992992 1.0913518754640767 1.1211356476628498 1.2206302629791674 1.0400924481766216 1.1510226301454862 1.088941141644979 1.0685977900945685 1.0 25.588669964560932 -8.050165137438096 0.745867374752205 0.9989039715387099 1.1332045079392277 0.41286764983407787 0.049868309226294434 0.7779841760739732 0.9834592427802489 0.04798854290341538 0.018302109375182587 8.909121106228527e-09 8.050165137438096 0.13430053640051776 YRSPYSGPK ddPTM_KYSE-520_SHP099_60min_R1 2 YRSPYSGPK 9 1 Q5QP22;Q5QP23;G3XAC6;Q14498-2;Q14498 Q5QP22 RBM39 RNA-binding protein 39 0 ; 73.84100000000001 0.020492 605990000.0 315080.0 286860.0 273480.0 207756.0 279878.0 286937.0 231099.0 255993.0 283460.0 278944.0 False True 297601.88430359215 273078.81501436135 291108.95838347136 227501.06777588115 301902.8063120127 285146.11974912434 254460.7422288916 255105.02003221525 231990.80944510162 276472.77317514806 1.076423840531518 0.9877240781368493 1.052938974931362 0.8228696994758219 1.091980244003103 1.031371431169758 0.9203826449401886 0.9227129930461683 0.8391090622805497 1.0 18.076777886400368 -6.786948676763876 12.029165272655094 0.9140598729316622 1.0066068537292312 0.23579272734086232 0.07883970207618687 1.196130361745996 558.6480575546427 0.03242929119572777 0.02204290852773852 1.6332449470384412e-07 6.786948676763876 0.09254698079756896 YRT(ph)PS(ph)RS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 1 YRTPSRSR 8 2 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 3 Y(0.015)RT(0.986)PS(0.999)RS(1)R 69.352 0.046725 126510000.0 280610.0 279620.0 246320.0 286020.0 259150.0 277140.0 263160.0 302890.0 275470.0 249560.0 True False 265044.0039178332 266186.6354818229 262198.18132593465 313203.25480495126 279543.6306382001 275410.2664601367 289762.78099409846 301839.3452850572 225451.59203359263 247349.09255474195 1.0715382101479718 1.0761577199759158 1.0600329219639502 1.2662397568150965 1.1301583027895403 1.1134476525285186 1.1714729898593412 1.2202969583090577 0.9114712720593342 1.0 17.916189081153178 -7.76875305521477 24.999153212152283 0.9557355635916722 1.1381847649935517 0.5532149095361799 0.06575750305258646 140.95803573697128 481793.3468539648 0.06121439030586941 0.017075250490414765 1.7031266503177114e-08 7.76875305521477 0.18244920140187948 YRT(ph)PSR ddPTM_KYSE-520_SHP099_60min_R1 1 YRTPSR 6 1 E9PG73;Q13427;C9JM79 E9PG73 PPIG Peptidyl-prolyl cis-trans isomerase G 1 YRT(1)PSR 104.44 0.029235 822440000.0 80211.0 74477.0 58395.0 49940.0 66185.0 79139.0 41673.0 63696.0 64644.0 65072.0 True False 75761.53593333575 70899.0131277439 62159.23513530353 54686.28258499148 71393.38295886276 78645.06414587852 45885.7135292866 63475.05344275813 52906.27914262732 64495.51270524993 1.1746791793031015 1.0992859836894162 0.9637761222145269 0.8479083317767008 1.1069511655041289 1.2193881534874103 0.7114559076224152 0.9841778254069335 0.8203094591156068 1.0 15.976911167634396 -6.760699533049971 24.999938954466952 0.8776673087225416 1.0569949113327413 0.356850262987354 0.12415245182149906 25.129940398998034 849206.0125081756 0.05127070834895809 0.03733007840010625 1.7350039463432353e-07 6.760699533049971 0.17932760261019964 YS(ph)AEMPQLPQDLK ddPTM_KYSE-520_SHP099_60min_R1 1 YSAEMPQLPQDLK 13 0 A0A087WU64;A6NMQ1;P09884 A0A087WU64 POLA1 DNA polymerase;DNA polymerase alpha catalytic subunit 1 Y(0.002)S(0.998)AEMPQLPQDLK 113.65 0.01826 0.0 508850.0 764110.0 506950.0 452980.0 516140.0 716470.0 517620.0 627050.0 721510.0 641090.0 True False 480623.07613267296 727401.0086475067 539628.808148679 496031.08300659637 556757.281565119 711998.2449689481 569946.081084379 624874.9099045709 590501.9717869721 635410.4413604733 0.7563978254805097 1.1447734586955685 0.8492602151662525 0.7806467296076334 0.8762167652974816 1.120532806235436 0.8969731121573499 0.9834193290350332 0.9293236833229434 1.0 19.27732927172021 YS(ph)DDGNRETDEK ddPTM_KYSE-520_SHP099_60min_R1 3 YSDDGNRETDEK 12 1 A0A075B785;A0A2R8Y566;Q9P260;Q9P260-2 A0A075B785 KIAA1468 LisH domain and HEAT repeat-containing protein KIAA1468 1 Y(0.143)S(0.857)DDGNRETDEK;Y(0.029)S(0.971)DDGNRETDEK;YS(0.999)DDGNRET(0.001)DEK 169.54 3.6064999999999997e-06 1368910000.0 2296430.0 2127490.0 1977420.0 2037670.0 1991450.0 2129270.0 1973730.0 2065680.0 2362960.0 2028880.0 True False 2169042.450080292 2025282.186972405 2104887.6571838683 2231329.5441521737 2148165.785199472 2115980.436117399 2173253.8901485093 2058514.638213337 1933906.02937415 2010905.7016447566 1.078639564404334 1.0071492588219775 1.0467361326104163 1.1096142113114147 1.0682578419477593 1.0522524424624684 1.0807338645322677 1.023675370023388 0.9617089591980236 1.0 20.93941399957052 -7.529775634880369 4.3671510892929755 0.9821583609291421 1.061800735978242 0.6077229300878576 0.02656129595868774 0.14038655890766527 6.650985161793074 0.019140029229720096 0.007281586330997042 2.9527342736281543e-08 7.529775634880369 0.07964237504909988 YS(ph)DGSIALDIFGPQK ddPTM_KYSE-520_SHP099_60min_R1 9 YSDGSIALDIFGPQK 15 0 Q12923-3;Q12923;Q12923-4;Q12923-2 Q12923-3 PTPN13 Tyrosine-protein phosphatase non-receptor type 13 1 YS(0.998)DGS(0.002)IALDIFGPQK;Y(0.039)S(0.96)DGSIALDIFGPQK;YS(1)DGSIALDIFGPQK;YS(1)DGSIALDIFGPQK;Y(0.005)S(0.992)DGS(0.003)IALDIFGPQK;YS(1)DGSIALDIFGPQK;YS(0.999)DGS(0.001)IALDIFGPQK;YS(1)DGSIALDIFGPQK;YS(0.999)DGS(0.001)IALDIFGPQK 270.21 3.0996999999999996e-25 2297419000.0 2265321.0 2187882.0 2058758.0 2136323.0 2109490.0 2038673.0 2009762.0 2144441.0 2630190.0 2051754.0 True False 2139659.1283245445 2082772.8646421637 2191468.8348092698 2339358.4956110683 2275494.8616437446 2025948.8855996495 2212928.3563469425 2137002.4346872936 2152613.7976942454 2033577.0558004552 1.0521652583665355 1.0241917603768125 1.0776423881054584 1.1503662912297423 1.1189617109188252 0.9962488905059941 1.0881949862853322 1.050858844316636 1.058535643660149 1.0 20.955588227404764 -6.248075477145981 24.79774587685223 1.0450355542771228 1.084565700355449 0.23243390199798664 0.040917940729583234 1398.7543704637117 2595495.878986799 0.014728151425555227 0.014625127273611628 5.648388015053254e-07 6.248075477145981 0.03953014607832617 YS(ph)DIFR ddPTM_KYSE-520_SHP099_60min_R1 1 YSDIFR 6 0 Q9P107;Q9P107-2;K7ELE8 Q9P107 GMIP GEM-interacting protein 1 YS(1)DIFR 107.66 0.031731999999999996 0.0 69672.0 69457.0 61121.0 65346.0 70561.0 71365.0 59467.0 80656.0 89856.0 77844.0 True False 65807.1552723113 66120.18146291758 65060.95745705769 71556.4641930087 76113.74926282857 70919.58456349731 65478.50470199139 80376.22316125184 73540.41548542665 77154.36272171557 0.8529285052832076 0.8569856470904094 0.8432570131092001 0.9274454699483725 0.9865125778740427 0.9191908540453352 0.8486688554238043 1.0417586294006087 0.9531595219142189 1.0 16.235460116371772 -3.226819458098045 0.19984852428988745 1.0128787852345225 0.5909052069587359 0.48065342338201944 0.048963488593639325 20.208275937305448 0.5249911994165517 0.10552366661029952 2.2558597812028736 0.0005931718626410659 3.226819458098045 -0.4219735782757865 YS(ph)GAYGASVSDEELK ddPTM_KYSE-520_SHP099_60min_R1 7 YSGAYGASVSDEELK 15 0 A0A286YEX5;C9JRZ6;F8WAR4;Q9NX63 A0A286YEX5 CHCHD3 MICOS complex subunit MIC19 1 Y(0.013)S(0.985)GAY(0.001)GASVSDEELK;Y(0.083)S(0.916)GAYGASVSDEELK;YS(1)GAYGASVSDEELK;YS(1)GAYGASVSDEELK;YS(0.943)GAYGAS(0.057)VSDEELK;YS(0.998)GAYGAS(0.002)VSDEELK;YS(1)GAYGASVSDEELK 357.92 2.0830999999999997e-67 8439360000.0 6583910.0 6681630.0 6037390.0 7432080.0 7148860.0 6863310.0 7865450.0 7544260.0 8403670.0 6612110.0 True False 6218687.3876008075 6360634.465468901 6426569.819565547 8138422.64866367 7711434.610550652 6820473.536474422 8660566.445394553 7518090.722903528 6877775.367281153 6553531.84954373 0.9489062585442024 0.9705658889735527 0.9806269301968796 1.2418376587626232 1.1766837771739125 1.0407324925031496 1.3215113078297651 1.1471815344007146 1.0494761489196085 1.0 22.643841187205677 -5.172761996340775 7.084447368137472 1.1505535591561704 0.9647953337572767 0.42601229593461476 0.09144609504843319 0.23744583458919785 16.39370639985036 0.024433306715373523 0.04262519027327908 6.717969126788388e-06 5.172761996340775 -0.18575822539889375 YS(ph)GAYGASVSDEELKR ddPTM_KYSE-520_SHP099_60min_R1 5 YSGAYGASVSDEELKR 16 1 A0A286YEX5;C9JRZ6;F8WAR4;Q9NX63 A0A286YEX5 CHCHD3 MICOS complex subunit MIC19 1 Y(0.001)S(0.885)GAY(0.001)GAS(0.048)VS(0.064)DEELKR;YS(1)GAYGASVSDEELKR;YS(1)GAYGASVSDEELKR;YS(1)GAYGASVSDEELKR;YS(1)GAYGASVSDEELKR 229.48 7.687399999999999e-19 6664010000.0 2731420.0 3279820.0 3045190.0 2901060.0 3010850.0 3366120.0 3083870.0 2977090.0 3972060.0 3174440.0 True False 2579902.687649224 3122252.5240898104 3241487.819876272 3176775.870164509 3247786.765606885 3345110.7964811837 3395617.675270824 2966763.1696480303 3250834.0314841922 3146316.9312769454 0.8199754646465829 0.9923515628867787 1.0302483477278628 1.0096808235002575 1.0322503538411045 1.063183038945653 1.0792357379880033 0.9429320804131317 1.033218872252907 1.0 21.585232571340306 -4.253124698751266 2.891258751369876 1.0248499948674281 0.7818361750536624 0.752510369374426 0.034875598425492524 0.20847561068859188 2.443086059550672 0.009226201196441467 0.11977710562059063 5.583098644958634e-05 4.253124698751266 -0.24301381981376569 YS(ph)PPAIS(ph)PLVSEK ddPTM_KYSE-520_SHP099_60min_R1 1 YSPPAISPLVSEK 13 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 2 Y(0.026)S(0.974)PPAIS(1)PLVSEK 101.05 0.0013534 118010000.0 179610.0 162080.0 137440.0 183970.0 180680.0 179490.0 183890.0 195990.0 198840.0 183460.0 True False 169646.67525634158 154293.43351295995 146299.6023117751 201454.45348740253 194898.48807142588 178369.73633156487 202479.3957934516 195310.15643440996 162735.66834849343 181834.68712972023 0.9329720194437722 0.8485368548130069 0.804574774049604 1.1078989199881628 1.0718443832027822 0.9809445004534064 1.1135355909788736 1.0741083536777358 0.8949649317041384 1.0 17.472267911463785 -5.259239770788863 24.99994252765649 1.0404301205525581 0.8606787756576169 0.5711420942586377 0.06846327046006175 135.65825191350265 1541833.7794083923 0.018857894881922112 0.030733510013694995 5.5050368345724336e-06 5.259239770788863 -0.17975134489494127 YS(ph)PPAISPLVSEK ddPTM_KYSE-520_SHP099_60min_R1 6 YSPPAISPLVSEK 13 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 YS(1)PPAISPLVSEK;YS(1)PPAISPLVSEK;YS(1)PPAISPLVSEK;YS(1)PPAISPLVSEK;YS(1)PPAISPLVSEK;YS(1)PPAISPLVSEK 209.39 3.9841e-11 9419950000.0 7710050.0 6895430.0 5671700.0 7045710.0 6991540.0 7105540.0 6844550.0 7564360.0 7389540.0 7008750.0 True False 7282358.156896381 6564163.1925485525 6037306.857040856 7715332.160030043 7541734.421579006 7061191.689193766 7536463.910370701 7538121.000694901 6047785.811144267 6946657.927724995 1.0483254296762712 0.9449383085857939 0.8690951706352485 1.1106538194773017 1.0856637105274733 1.0164876063655952 1.0849049987464785 1.085143543718959 0.8706036592080899 1.0 22.72788762618803 -5.267886140168181 24.997097773732246 1.043023825756261 0.9532015031951407 0.19140959098425714 0.076416450189925 761.3852417731596 2952245.7598899263 0.021417964181933938 0.032604034164031986 5.396520856108713e-06 5.267886140168181 -0.08982232256112022 YS(ph)PPRDDDKVDNQAK ddPTM_KYSE-520_SHP099_60min_R1 7 YSPPRDDDKVDNQAK 15 2 Q14669-3;Q14669;Q14669-2;Q14669-4 Q14669-3 TRIP12 E3 ubiquitin-protein ligase TRIP12 1 Y(0.035)S(0.965)PPRDDDKVDNQAK;YS(1)PPRDDDKVDNQAK;YS(1)PPRDDDKVDNQAK;YS(1)PPRDDDKVDNQAK;YS(1)PPRDDDKVDNQAK;Y(0.001)S(0.999)PPRDDDKVDNQAK;YS(1)PPRDDDKVDNQAK 187.47 4.0755e-11 23766900000.0 13677330.0 12696910.0 12059650.0 11293490.0 12070540.0 11583970.0 11923950.0 12861390.0 14057540.0 11814760.0 True False 12918621.239818601 12086931.38514953 12837034.335122222 12366819.89408841 13020422.826022075 11511670.146374512 13129339.232537528 12816776.839960976 11505045.09774534 11710090.418144198 1.103204226314243 1.0321808759410973 1.0962369953379592 1.0560823573938116 1.1118977190686403 0.9830556157395468 1.1211987921283917 1.0945070774263213 0.9824898601909042 1.0 23.48124887970093 -7.766807605631387 24.997683582594004 0.9912448811430892 1.0731914461397496 0.4115365360075919 0.039926763459343456 132.87463177631543 618711.0787023846 0.03296753620766555 0.009499640890377593 1.7107730272302534e-08 7.766807605631387 0.08194656499666042 YS(ph)PRHS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 4 YSPRHSR 7 1 J3KTL2;Q07955;J3KSR8 J3KTL2 SRSF1 Serine/arginine-rich splicing factor 1 2 Y(0.282)S(0.718)PRHS(1)R;Y(0.145)S(0.855)PRHS(1)R;Y(0.148)S(0.852)PRHS(1)R;Y(0.292)S(0.708)PRHS(1)R 65.5 0.022489 37739534000.0 3350886.0 3428119.0 3180669.0 2826934.0 2868599.0 3099135.0 2538333.0 2371727.0 3768797.0 2725416.0 True False 3165005.6737543633 3263427.0175284785 3385700.012990334 3095604.9574112995 3094341.421204361 3079792.1488992404 2794932.4713827823 2363500.032602243 3084478.4684409443 2701270.9345815605 1.171672797880468 1.2081079967767092 1.2533729844151287 1.1459809224544975 1.1455131662621205 1.140127082208551 1.034673136856496 0.874958525020505 1.1418619394869194 1.0 21.365206917195618 -6.6737624137724065 2.2486217267354114 0.9975217712464033 1.1877775567574103 0.5997688880149614 0.06678913771522207 0.2003816171766565 2.068930441894289 0.030355879627117915 0.021156082592095154 2.1195203282462768e-07 6.6737624137724065 0.19025578551100697 YS(ph)PS(ph)PPPK ddPTM_KYSE-520_SHP099_60min_R1 2 YSPSPPPK 8 0 A9Z1X7;Q8IYB3-2;E9PCT1;Q8IYB3 A9Z1X7;Q8IYB3 SRRM1 Serine/arginine repetitive matrix protein 1 2 Y(0.198)S(0.803)PS(0.999)PPPK;Y(0.095)S(0.905)PS(1)PPPK 65.347 0.02412 0.0 1525840.0 1440040.0 1327750.0 1262120.0 1366540.0 1339460.0 1229510.0 1380350.0 1585400.0 1335060.0 True False 1441198.6135133717 1370858.3168558937 1413338.8894751135 1382071.505329785 1474078.9234509987 1331099.9332925424 1353800.8696612467 1375561.8880261108 1297531.3246816602 1323232.4070609624 1.0891500282361015 1.0359920974885382 1.0680957343043669 1.0444661859510458 1.1139985051643968 1.0059456873861294 1.0231013557687723 1.0395467044835893 0.9805770458445867 1.0 20.335635042178783 -6.294728032762814 24.989232521074236 1.0131350180254577 1.0668701019775515 0.5909654066638175 0.025011025251629376 499.06373605365644 374637.57314467913 0.008511943064056721 0.0075074287855633 5.073082993347568e-07 6.294728032762814 0.05373508395209381 YS(ph)PSQNS(ph)PIHHIPSR ddPTM_KYSE-520_SHP099_60min_R1 8 YSPSQNSPIHHIPSR 15 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 Y(0.459)S(0.53)PS(0.011)QNS(0.999)PIHHIPSR;Y(0.001)S(0.955)PS(0.274)QNS(0.767)PIHHIPS(0.003)R;Y(0.306)S(0.693)PS(0.247)QNS(0.754)PIHHIPSR;YS(0.976)PS(0.024)QNS(1)PIHHIPSR;YS(0.904)PS(0.097)QNS(0.663)PIHHIPS(0.337)R;YS(0.815)PS(0.185)QNS(1)PIHHIPSR;Y(0.043)S(0.482)PS(0.475)QNS(1)PIHHIPSR;Y(0.016)S(0.937)PS(0.048)QNS(0.996)PIHHIPS(0.003)R 233.85 1.3850999999999999e-18 9999320000.0 3477788.0 3594500.0 3337866.0 4563450.0 3178310.0 3243793.0 3440400.0 3392790.0 3874940.0 3165470.0 True False 3284868.1668415004 3421814.8245455013 3553030.1831344287 4997158.915948725 3428424.914889819 3223547.2846630802 3788189.2070683106 3381021.203373139 3171348.5752882254 3137426.3984983917 1.046994494727805 1.0906438557995244 1.1324664651368235 1.592757337141175 1.0927507069267672 1.0274495319494688 1.2074193067545367 1.077641599812934 1.0108121028133343 1.0 21.581150184318464 -5.964562323000478 24.999998254786544 1.0764007116957155 1.218575173721392 0.18722520257227415 0.14931038716218942 340.192173668495 239991.83163569987 0.04882281054451022 0.055359696594224544 1.085019833761039e-06 5.964562323000478 0.1421744620256764 YS(ph)PSQNS(ph)PIHHIPSRR ddPTM_KYSE-520_SHP099_60min_R1 1 YSPSQNSPIHHIPSRR 16 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 Y(0.309)S(0.683)PS(0.401)QNS(0.606)PIHHIPSRR 73.672 0.011208 2246100000.0 424200.0 666750.0 598800.0 707550.0 385910.0 403670.0 364840.0 329470.0 593920.0 352920.0 True False 400668.7803782646 634718.329187846 637399.6061138752 774795.339267336 416278.92147245933 401150.5457962159 401721.5876952686 328327.14546887606 486079.09950481425 349793.4033676056 1.1454440721890715 1.8145520272170672 1.8222173430869932 2.215008435859742 1.1900708174161383 1.1468213577905526 1.1484538697063151 0.9386316102817692 1.3896176852540099 1.0 18.416143556667848 -5.887051520494456 8.709257334358064 1.1277062931845454 1.7581015687397343 0.5597145430810766 0.2670691635426448 0.19402705018578756 14.083479970088364 0.08333321339873127 0.09460797350516369 1.2970253953160159e-06 5.887051520494456 0.6303952755551889 YS(ph)PSQNSPIHHIPS(ph)R ddPTM_KYSE-520_SHP099_60min_R1 2 YSPSQNSPIHHIPSR 15 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 YS(0.998)PS(0.003)QNS(0.156)PIHHIPS(0.844)R;YS(0.605)PS(0.395)QNS(0.015)PIHHIPS(0.985)R 223.95 1.958e-14 3364930000.0 2259000.0 2331900.0 2092000.0 3080800.0 2061600.0 2016120.0 2217400.0 2164300.0 2407500.0 2024780.0 True False 2133688.7667951444 2219872.02374674 2226853.667318349 3373598.3057237044 2223836.191100572 2003536.6472382573 2441556.4317385373 2156792.548451419 1970358.688136181 2006842.0244550025 1.0632071387754547 1.1061518528592653 1.109630773215991 1.6810482661882025 1.1081271789215688 0.9983529459835571 1.216616157119587 1.0747196451784182 0.9818205240501034 1.0 20.93649562373995 -5.979243072357912 24.998740949508345 1.067352225490804 1.2428169292536726 0.20336031373726315 0.17310955252217097 432.7078101775591 521131.9501392958 0.05625107538586295 0.06377675326447721 1.0489551695836315e-06 5.979243072357912 0.1754647037628685 YS(ph)PSQNSPIHHIPSR ddPTM_KYSE-520_SHP099_60min_R1 1 YSPSQNSPIHHIPSR 15 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 YS(0.997)PS(0.003)QNSPIHHIPSR 178.72 7.248899999999999e-09 537050000.0 175580.0 244560.0 377990.0 359830.0 130630.0 255390.0 127220.0 159880.0 153320.0 270430.0 True False 165840.22738994757 232810.97050795628 402355.84020538395 394028.1350131659 140909.83781697106 253796.01627788966 140080.63914754958 159325.4135962725 125480.95288267471 268034.2005913563 0.6187278601911955 0.8685868071847249 1.5011361957454592 1.4700666338244623 0.5257158881444445 0.9468792255538534 0.5226222580495086 0.5944219552756973 0.4681527678401846 1.0 18.032057571670258 -5.778374172906262 24.99851478644294 0.6618649427573093 1.1246626178102186 0.3487115643075489 0.2929416486537956 279.7196744797699 412910.12129562796 0.09650872257934728 0.10970892478970637 1.665811389395745e-06 5.778374172906262 0.46279767505290925 YS(ph)PTSPKYSPT(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 YSPTSPKYSPTSPK 14 1 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 Y(0.013)S(0.893)PT(0.068)S(0.029)PKY(0.003)S(0.287)PT(0.447)S(0.26)PK 49.187 0.058471 0.0 852490.0 742480.0 648010.0 683250.0 633550.0 651730.0 629850.0 696150.0 827200.0 670180.0 True False 805200.6803033167 706810.1463147997 689781.7614526586 748185.8745733971 683406.7805936001 647662.3113230319 693521.3847436261 693735.2181326307 677001.3320150565 664242.7265921507 1.2122085016035336 1.0640841337338205 1.038448347024489 1.1263742072298037 1.0288509805741783 0.9750386197615087 1.0440782517886005 1.0444001723463183 1.0192077457714335 1.0 19.341350999836997 -1.0000000000133549 0.8140482954952727 1.0295656212167867 49.26968386978226 0.6784682226271239 0.03665181328073228 349.4708300740822 1.1354532937220205 0.013563779675787726 31130.5178554106 0.09999999999692492 1.0000000000133549 48.24011824856547 YS(ph)PVSK ddPTM_KYSE-520_SHP099_60min_R1 1 YSPVSK 6 0 A0A0C4DFT3;A0A590UJD9;A0A590UK70;A0A590UK02;Q12959-7;A0A590UK81;A0A590UKA8;A0A590UJR5;A0A590UJ81;A0A590UJ18;A0A590UJ68;A0A590UJX2;A0A590UJS9;A0A590UJR4;A0A590UJ29;A0A590UK48;A0A590UJ64;E7EQD7;Q12959-9;Q12959-8;Q12959-5;Q12959-3;Q12959-6;Q12959;H7C166;A0A590UJ08;Q12959-4;Q12959-2;A0A590UJ25;A0A590UJL2;A0A590UJC5 A0A0C4DFT3;A0A590UJ08 DLG1 Disks large homolog 1 1 YS(0.984)PVS(0.016)K 86.095 0.016744 2142100000.0 7658000.0 6699800.0 6347200.0 6743800.0 7147900.0 6266100.0 6904100.0 6530200.0 7961800.0 6163900.0 True False 7233195.474155477 6377931.551395181 6756350.667879076 7384728.724402588 7710399.064012304 6226990.945608225 7602033.805522707 6507548.260360142 6516137.820644921 6109292.641441641 1.1839661150114136 1.0439721790590386 1.1059137390224516 1.2087698458425746 1.2620772185162243 1.019265455278438 1.2443394434824153 1.0651884992735463 1.0665944820589366 1.0 22.542573917983407 -7.496144683328082 22.340321196215346 1.044161844119568 1.1483728345229145 0.29908258317983516 0.07673163383904459 248.85364699946436 207957.51694732468 0.04222554614040013 0.020140404844747783 3.1904747851579094e-08 7.496144683328082 0.10421099040334658 YS(ph)SDDTLDR ddPTM_KYSE-520_SHP099_60min_R1 1 YSSDDTLDR 9 0 O95171-3;O95171-2;O95171;F2Z2X8 O95171-3 SCEL Sciellin 1 Y(0.002)S(0.499)S(0.499)DDTLDR 103.26 0.0029243000000000003 522160000.0 1513500.0 1161000.0 1194300.0 1099700.0 1086300.0 1226400.0 1208200.0 1085700.0 1473700.0 1085100.0 True False 1429543.137912549 1105223.8173034727 1271286.488947565 1204215.1573631398 1171785.6297984833 1218745.582690019 1330336.6468956883 1081933.9601042846 1206113.228953806 1075486.8581950245 1.329205584447338 1.0276497652034124 1.1820567394762482 1.1196930470951159 1.08953970089888 1.1332036030039676 1.236962252731172 1.0059945892040747 1.1214578958017303 1.0 20.036558465323917 -12.167654644757116 0.021476301000466894 1.5159983637359724e-07 1.9681014041436242 0.2742034217446727 0.08438862002358063 2963.930673407287 6.672978901805288 384.9219511061758 241.08019898201485 6.797439568322573e-13 12.167654644757116 1.9681012525437878 YS(ph)SPTAGSAK ddPTM_KYSE-520_SHP099_60min_R1 1 YSSPTAGSAK 10 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 Y(0.099)S(0.786)S(0.114)PT(0.001)AGSAK 64.10300000000001 0.041499 1052700000.0 1722300.0 1878700.0 1611900.0 1390900.0 1506800.0 1771300.0 1583800.0 1756300.0 1952500.0 1768000.0 True False 1626760.5856800685 1788444.4320138092 1715805.653131187 1523090.717810668 1625376.5874807634 1760244.6596696274 1743905.960398439 1750207.8052235036 1597975.218519581 1752336.8954831862 0.9283378041478196 1.0206053622586464 0.9791528430142845 0.869176881304376 0.9275480027101667 1.0045126962782238 0.9951887476052814 0.9987849994683268 0.9119109588107818 1.0 20.740848736225782 -6.259134112399734 24.993290754626297 0.9828228718742498 0.9468554317924829 0.14976836973380203 0.04408346454522138 460.22087991723726 4989632.969983565 0.015950047704735553 0.015251205829039471 5.50637630377705e-07 6.259134112399734 -0.03596744008176689 YS(ph)SSSIPEPFGSR ddPTM_KYSE-520_SHP099_60min_R1 1 YSSSSIPEPFGSR 13 0 Q8WUF5;K7EN03 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 YS(0.852)S(0.129)S(0.02)SIPEPFGSR 217.46 2.5800999999999996e-11 559420000.0 431970.0 408540.0 369210.0 432790.0 417080.0 404730.0 498750.0 430190.0 568770.0 423280.0 True False 408007.762989154 388913.12516895786 393009.86735688645 473922.2314769416 449901.8231394188 402203.92994302907 549168.5173309264 428697.7712971004 465495.70552490815 419530.068506857 0.9725352093147654 0.9270208606337386 0.9367859346903116 1.1296502135440993 1.072394702817506 0.9587010804124407 1.3090087184584018 1.0218523140018834 1.1095645830146257 1.0 18.678414689466965 -5.253315139242449 24.175713681983314 1.0902279859201842 0.9436046668964706 0.3364898138796093 0.09021374551738658 428.1670401293376 1274112.0349822594 0.024002051351805692 0.04061980296178168 5.580650962552777e-06 5.253315139242449 -0.14662331902371362 YS(ph)VDIPLDK ddPTM_KYSE-520_SHP099_60min_R1 2 YSVDIPLDK 9 0 K7ELC7;P61353 K7ELC7 RPL27 60S ribosomal protein L27 1 Y(0.001)S(0.999)VDIPLDK;YS(1)VDIPLDK 166.14 0.0032247 0.0 721120.0 712580.0 637810.0 706100.0 667310.0 738980.0 731460.0 769320.0 761590.0 784170.0 True False 681118.0360829186 678346.5871956147 678924.2531320812 773207.5317032944 719823.5005254766 734367.751709288 805403.1151616634 766651.4084806384 623304.4541215515 777222.863875029 0.8763484294415157 0.8727825939313685 0.8735258375533926 0.9948337441442274 0.9261481281400109 0.944861230725925 1.036257620042384 0.9863984245886899 0.8019636105581341 1.0 19.567968816319848 -5.24265110369213 22.508956234980506 0.9568772323399012 0.8740752602996621 0.28188467638956227 0.059638119131315115 300.4553255074923 359951.52088230476 0.016212970590950733 0.027987569513050554 5.71937926177379e-06 5.24265110369213 -0.08280197204023909 YSCPES(ph)PSQELGGPLPSPGPR ddPTM_KYSE-520_SHP099_60min_R1 4 YSCPESPSQELGGPLPSPGPR 21 0 A0A494BZV2;A0A1W2PPU9 A0A494BZV2 1 YSCPES(0.998)PS(0.002)QELGGPLPSPGPR;YSCPES(0.993)PS(0.007)QELGGPLPSPGPR;YSCPES(0.991)PS(0.009)QELGGPLPSPGPR;YSCPES(0.997)PS(0.003)QELGGPLPSPGPR 361.31 3.270199999999999e-78 564240000.0 358545.0 422717.0 319676.0 259105.0 284330.0 355500.0 252629.0 308233.0 319737.0 308022.0 True False 338655.7941082626 402409.0408088475 340282.82645968464 283730.26129724144 306705.1533835979 353281.1926339704 278167.20474144275 307163.8116651233 261680.8207138517 305293.1647174897 1.1092806300515958 1.3181069454379246 1.1146100397451528 0.9293698454067847 1.0046250254813758 1.1571867092435155 0.911147830639613 1.0061273790697696 0.8571460188307992 1.0 18.21983576349486 -5.028863569033553 5.143395867382137 0.9878802424024552 1.215949440392164 0.5356425394946771 0.08824898761367121 0.13370190395939585 9.711138633121541 0.023633772286950773 0.044774574053507994 9.356995723037974e-06 5.028863569033553 0.22806919798970882 YSCQEGDKFK ddPTM_KYSE-520_SHP099_60min_R1 7 YSCQEGDKFK 10 1 P29034;Q5RHS7 P29034 S100A2 Protein S100-A2 0 ;;;;;; 163.64 0.00039778 14054900000.0 13288810.0 12013070.0 7625910.0 7167090.0 10192040.0 11280230.0 8344880.0 8750490.0 8561600.0 8939390.0 False True 12551653.21871404 11435944.0852143 8117488.360487417 7848248.078735825 10994095.563225018 11209825.90038114 9188461.908580448 8720136.592569718 7007029.260372468 8860193.959340177 1.4166341364889 1.2907103543888943 0.9161750180344732 0.8857873896160493 1.2408414097566498 1.2651896732536023 1.0370497475277298 0.9841925168440794 0.7908437775209026 1.0 23.07890685062313 -4.613133981190124 4.965786315592133 1.0284676313982608 1.3883379353870566 0.4908123474253403 0.13972272584874987 0.1763605417804362 7.1425497012720465 0.03955412339771125 0.11264208062596354 2.4370588621920823e-05 4.613133981190124 0.3598703039887958 YSDFEWLR ddPTM_KYSE-520_SHP099_60min_R1 3 YSDFEWLR 8 0 O60493-4;O60493;O60493-3 O60493-4 SNX3 Sorting nexin-3 0 ;; 160.78 0.0016611 357570000.0 690590.0 652910.0 429572.0 443950.0 722310.0 655920.0 557860.0 486290.0 520180.0 526190.0 False True 652281.5960429658 621543.2235621107 457262.89845950215 486142.87452156557 779151.6876182844 651826.1599788297 614253.9329889338 484603.1734909396 425728.4246706872 521528.36596962565 1.2507116364231574 1.1917726131857418 0.8767747418864914 0.9321503991786307 1.4939775829253035 1.2498383645287525 1.1777958267848245 0.9291981129156135 0.8163092411649994 1.0 18.992386197614785 -7.2926336742712285 5.546386102140821 0.900554159536537 1.1642704141391442 0.3240059293372356 0.16685592621616874 0.2540910653116527 23.37549022144759 0.10024290631438042 0.04863106261413826 5.0976067093403757e-08 7.2926336742712285 0.2637162546026073 YSDPGPVYDCLVWHDGEVWR ddPTM_KYSE-520_SHP099_60min_R1 1 YSDPGPVYDCLVWHDGEVWR 20 0 A0A494C1B8;A0A494C0U1;Q5VZU9;P29144 A0A494C1B8 TPP2 Tripeptidyl-peptidase 2 0 135.18 5.0872e-06 226370000.0 78545.0 79754.0 50205.0 86103.0 87382.0 77572.0 56041.0 68572.0 62722.0 60467.0 False True 74187.95227442445 75922.49812680545 53441.29463084019 94286.203232189 94258.46626443055 77087.84437412758 61706.17118745354 68334.13973682513 51333.26589295017 59931.309422614126 1.2378830529344451 1.2668252847844053 0.8917091107419549 1.5732378307858497 1.57277501814208 1.2862699833659852 1.0296149338624279 1.140207687687203 0.856535029644795 1.0 15.871022274847322 -6.7561011339917885 5.268078781140274 1.0156809191796625 1.3102380019039865 0.37139568919749144 0.19013884383751273 0.21919694552233046 17.887639967917913 0.08375547082854269 0.06018358653420738 1.7534721239037156e-07 6.7561011339917885 0.294557082724324 YSDVEVPASVTGYSFASDGDS(ph)GTCSPLRHSFQK ddPTM_KYSE-520_SHP099_60min_R1 1 YSDVEVPASVTGYSFASDGDSGTCSPLRHSFQK 33 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 YSDVEVPASVTGYSFASDGDS(0.25)GT(0.25)CS(0.25)PLRHS(0.25)FQK 64.914 0.016593 248980000.0 41955.0 69740.0 49520.0 69345.0 68167.0 63258.0 57206.0 53912.0 99300.0 48499.0 True False 39627.67251478099 66389.58571812579 52712.13843480144 75935.5279506655 73531.35508282525 62863.18335763635 62988.94075675781 53724.991855155386 81269.62314929294 48069.33659165103 0.8243856754549794 1.381121322353692 1.0965855194256373 1.5797082575891934 1.5296935696756966 1.3077605770110587 1.3103767437410008 1.1176561954983724 1.690674948141646 1.0 15.552829272425308 -4.258801010469525 24.100985848262972 1.343203518166265 0.8243853627878769 0.34465979922499246 0.2108795126951568 163.01103927841766 1488927.2704849136 0.05012470205602383 0.3319168418751682 5.510601289903448e-05 4.258801010469525 -0.518818155378388 YSDVEVPASVTGYSFASDGDSGT(ph)CSPLRHS(ph)FQK ddPTM_KYSE-520_SHP099_60min_R1 1 YSDVEVPASVTGYSFASDGDSGTCSPLRHSFQK 33 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 2 YSDVEVPASVTGYSFAS(0.074)DGDS(0.293)GT(0.495)CS(0.495)PLRHS(0.642)FQK 112.01 0.0038829 424960000.0 163240.0 143570.0 114030.0 163360.0 126230.0 160960.0 128770.0 130780.0 151530.0 125020.0 True False 154184.75178912783 136672.68169703646 121380.5562544508 178885.68528402524 136163.58284954648 159955.38893491947 141787.3282740918 130326.35470428156 124015.97176044676 123912.4200640881 1.2443042570662628 1.102978068109304 0.9795673120714791 1.4436461267684442 1.0988695304241658 1.2908745455232797 1.1442543709561859 1.0517618382150566 1.0008356845609592 1.0 16.918961274238452 -7.288856416758079 2.734685768369034 1.0069703213818986 1.1882396921574785 0.31130708433036147 0.11772274807817042 0.36794608858597594 5.392471810159056 0.07552454376788664 0.03286500528848525 5.1421362900406396e-08 7.288856416758079 0.18126937077557992 YSDVEVPASVTGYSFASDGDSGT(ph)CSPLRHSFQK ddPTM_KYSE-520_SHP099_60min_R1 1 YSDVEVPASVTGYSFASDGDSGTCSPLRHSFQK 33 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 YSDVEVPASVTGYSFASDGDS(0.081)GT(0.364)CS(0.278)PLRHS(0.278)FQK 124.76 0.00020369 172830000.0 78603.0 117820.0 94379.0 161980.0 98532.0 90724.0 84442.0 95332.0 129430.0 77054.0 True False 74242.73489880425 112159.75034857451 100462.82135173914 177374.530498937 106285.90782960884 90157.757863641 92978.22143450243 95001.31554265598 105928.77466478337 76371.36150710488 0.9721279473575627 1.468610067114493 1.315451490836562 2.3225267560856007 1.3916984813701532 1.1805178811072206 1.2174487870803847 1.2439390062964628 1.3870222106087338 1.0 16.220744123080536 -6.0009414173074855 24.99997377530209 1.2289103835503072 1.5459021395559862 0.16741696270916806 0.32734424695319037 67.0502850259239 1780651.1268350251 0.10545575233393319 0.11812020630920468 9.978346542922545e-07 6.0009414173074855 0.31699175600567897 YSDVEVPASVTGYSFASDGDSGTCSPLRHS(ph)FQK ddPTM_KYSE-520_SHP099_60min_R1 1 YSDVEVPASVTGYSFASDGDSGTCSPLRHSFQK 33 1 P35611;P35611-3;E7EV99;E7ENY0;P35611-2;P35611-6;P35611-4;H0Y9H2;P35611-5 P35611 ADD1 Alpha-adducin 1 YSDVEVPASVTGYSFASDGDSGT(0.003)CS(0.005)PLRHS(0.992)FQK 264.7 1.1169999999999999e-41 1198200000.0 363080.0 467710.0 451480.0 808310.0 424900.0 341320.0 442560.0 368080.0 511280.0 377640.0 True False 342939.22861796414 445240.5095529777 480583.1231935406 885131.5393727366 458337.21264970605 339189.6952737749 487298.2837693728 366803.216390518 418444.4403199442 374294.4033994745 0.9162285770325937 1.1895462649431716 1.283970903194689 2.364800358577788 1.2245366441146994 0.9062109724140511 1.3019117554084618 0.9799858428527948 1.1179553755532634 1.0 18.513813951079207 -5.992391731604308 24.999480080125135 1.0739352850733468 1.4579056710621827 0.19295476151418622 0.36255724117648563 324.2199812849954 1065322.8270226636 0.11900938175874093 0.1346917875300109 1.0176730375921482e-06 5.992391731604308 0.3839703859888359 YSEEGLS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 4 YSEEGLSPSK 10 0 A0A0C4DGI9;J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9 A0A0C4DGI9 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 YSEEGLS(0.988)PS(0.011)K;YSEEGLS(0.995)PS(0.005)K;YSEEGLS(1)PSK;YSEEGLS(0.999)PS(0.001)K 234.63 1.7172e-13 2659970000.0 5066380.0 4544400.0 4385520.0 3813830.0 4072900.0 4280770.0 4259260.0 5126780.0 5775420.0 4703130.0 True False 4785337.801821857 4326080.202716536 4668217.636280095 4176295.2565301945 4393414.058368998 4254052.126558996 4689827.567171766 5108996.396779441 4726749.314490322 4661463.927179776 1.026574028369029 0.9280518460074945 1.001448838649365 0.8959192480669667 0.9424966334614648 0.9126000314525081 1.0060847065289102 1.0960068503351963 1.014005340024168 1.0 22.152351672017495 -6.969545305852034 6.6349658825816595 1.0432962267763664 0.9499637944996683 0.444065679333738 0.043467998776216876 0.14209097595611728 20.13191296953565 0.017955557023361362 0.011855303850176316 1.0726417433903773e-07 6.969545305852034 -0.09333243227669807 YSEEGLS(ph)PSKR ddPTM_KYSE-520_SHP099_60min_R1 1 YSEEGLSPSKR 11 1 A0A0C4DGI9;J3KPG5;F8VU39;Q9UIF9-2;Q9UIF9-3;Q9UIF9 A0A0C4DGI9 BAZ2A Bromodomain adjacent to zinc finger domain protein 2A 1 YS(0.001)EEGLS(0.674)PS(0.324)KR 89.44 0.0032488 1042800000.0 1107200.0 927490.0 906100.0 882310.0 834350.0 845440.0 833370.0 961310.0 1172600.0 859150.0 True False 1045781.4088515199 882931.9882091272 964508.6558112589 966164.4771238248 900008.5981978858 840163.2953599545 917615.1725074169 957975.4399814396 959685.3988404913 851538.5994085852 1.2281080500377095 1.0368666656125107 1.1326658080809657 1.1346103133725824 1.056920495234114 0.9866414698564091 1.0775966857459234 1.1249935594778409 1.127001640920349 1.0 19.699712401772462 -4.251025061481373 24.65046236258377 1.079541195447031 1.2281081516954495 0.4316694378884809 0.05240896822119575 1319.9478224066254 3124214.283207983 0.013610312357265945 0.1884928049316817 5.610156010235769e-05 4.251025061481373 0.14856695624841842 YSEKEDKYEEEIK ddPTM_KYSE-520_SHP099_60min_R1 9 YSEKEDKYEEEIK 13 2 P67936;A0A2R8Y5V9;A0A2R8YH90;A0A2R8YE05;K7ENT6;P67936-2;A0A2R8YHD2;A0A5F9UN72;K7EPB9 P67936 TPM4 Tropomyosin alpha-4 chain 0 ;;;;;;;; 174.17 3.0641e-07 79043330000.0 15536390.0 14088760.0 9705280.0 9520010.0 14595490.0 13298670.0 11170620.0 11768980.0 12125070.0 10717570.0 False True 14674555.475674378 13411914.821940092 10330897.877797037 10424788.888104625 15744072.026021779 13215668.067638839 12299855.28434526 11728156.155280579 9923462.93614097 10622620.667943286 1.3814439896134985 1.2625806042772738 0.9725375875440414 0.9813763678453027 1.4821269174690477 1.2441061844108579 1.1578927337077465 1.104073704775466 0.9341821803058242 1.0 23.34063639628868 -7.476545958979805 2.202853858897135 0.9679290300727983 1.20942132784561 0.29967616592989 0.1488892431639838 0.46470487734277344 4.151429287181625 0.13130725697136972 0.044953205525270164 3.3377518171801656e-08 7.476545958979805 0.24149229777281178 YSHSGS(ph)S(ph)SPDTK ddPTM_KYSE-520_SHP099_60min_R1 3 YSHSGSSSPDTK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 YSHS(0.18)GS(0.576)S(0.666)S(0.577)PDTK;Y(0.008)S(0.005)HS(0.093)GS(0.642)S(0.698)S(0.547)PDT(0.006)K;YSHS(0.021)GS(0.94)S(0.772)S(0.267)PDTK 114.24 0.0013584 1104750000.0 4182200.0 4164000.0 3631300.0 4882300.0 3974790.0 3993990.0 4035790.0 3714790.0 4648900.0 3962440.0 True False 3950205.028990993 3963955.189708579 3865379.4082854292 5346312.324082982 4287583.3595385365 3969062.026914638 4443767.03871474 3701904.2605285007 3804776.9492321005 3927335.8643316673 1.005823073312121 1.0093242153566468 0.9842243041627963 1.3613076418135142 1.091728211604885 1.010624546518145 1.131496564649165 0.9425993570220077 0.9687933705358243 1.0 21.905119551358496 -7.2678504302368125 24.238393594746054 0.9667722626049944 1.0861844079473428 0.20283308069742068 0.10389408640929136 591.4544216350844 2236100.006603001 0.05824560279940499 0.029058324787701637 5.396964604119399e-08 7.2678504302368125 0.11941214534234845 YSHSGS(ph)SS(ph)PDTK ddPTM_KYSE-520_SHP099_60min_R1 2 YSHSGSSSPDTK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 YSHSGS(0.756)S(0.611)S(0.629)PDT(0.004)K;YSHS(0.002)GS(0.842)S(0.311)S(0.844)PDTK 187.97 9.9899e-08 929890000.0 2743500.0 2694230.0 2458960.0 3351630.0 2533240.0 2480200.0 2547850.0 2489630.0 3149180.0 2442640.0 True False 2591312.585968338 2564795.146678323 2617468.4960751063 3670167.907495694 2732591.575836056 2464720.1518165222 2805411.5426197536 2480994.054614008 2577368.2963674734 2421000.109945163 1.0703479835971723 1.0593948906249397 1.08115174605853 1.5159718053787388 1.1287036149279441 1.0180586699239553 1.1587820798088677 1.0247806451649453 1.0645882607687498 1.0 21.207171714178305 -6.002646817231177 24.999106430063307 1.0627196473099032 1.1853637959031962 0.18029467048032277 0.12878579775634064 214.34789499024535 2024540.067034955 0.04282015415872072 0.04772950252498832 9.939240120272844e-07 6.002646817231177 0.12264414859329298 YSHSGSS(ph)S(ph)PDTK ddPTM_KYSE-520_SHP099_60min_R1 2 YSHSGSSSPDTK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 2 YSHS(0.008)GS(0.401)S(0.651)S(0.94)PDTK;YSHSGS(0.19)S(0.942)S(0.868)PDTK 278.06 2.6766000000000003e-22 611820000.0 1617610.0 1639570.0 1514790.0 1981430.0 1519750.0 1539810.0 1591010.0 1538680.0 1861600.0 1423590.0 True False 1527877.9486744099 1560802.5961552577 1612435.7871496952 2169744.511461349 1639345.6788053417 1530199.4746264827 1751844.8175612576 1533342.6782106117 1523580.3671170557 1410978.1001362605 1.082850221790728 1.1061848486553607 1.1427787482980634 1.5377591695093022 1.161850547961749 1.084495552750754 1.2415818625335708 1.0867232298378935 1.0798044044552648 1.0 20.428264165289114 -7.664011716241053 1.0868022388840362 1.0029854440801313 1.2012870278114631 0.20711145269093678 0.12625158939277575 0.8123435596147037 1.887745491908819 0.12567898792013532 0.043071982991044394 2.1676456260632198e-08 7.664011716241053 0.19830158373133178 YSHSGSSS(ph)PDTK ddPTM_KYSE-520_SHP099_60min_R1 4 YSHSGSSSPDTK 12 0 Q9UQ35;Q9UQ35-2;I3L4D8;I3L182 Q9UQ35 SRRM2 Serine/arginine repetitive matrix protein 2 1 YSHSGSS(0.211)S(0.789)PDTK;YSHSGS(0.001)S(0.192)S(0.807)PDTK;YSHS(0.002)GS(0.025)S(0.025)S(0.948)PDTK;YSHS(0.01)GS(0.074)S(0.074)S(0.843)PDTK 151.66 2.5637e-05 2302300000.0 2885920.0 3865830.0 3546690.0 8876900.0 3277340.0 3202690.0 3560800.0 3030850.0 4203810.0 3025540.0 True False 2725832.264661108 3680109.724070869 3775315.312304639 9720557.907062707 3535248.0124862003 3182700.8237324664 3920760.4140590676 3020336.6887557097 3440504.073426271 2998736.069434504 0.9089937232039031 1.2272202817651963 1.2589688538400048 3.241551667765077 1.178912692090595 1.0613474310637327 1.307470988868466 1.0072032412393261 1.1473180679335593 1.0 21.515923119848907 -5.963530747576794 24.999856176800115 1.1180486555828728 1.6760529226889367 0.16901660186024658 0.589978875679932 331.11740361671133 226981.2788248641 0.1923228179809328 0.2180730180640042 1.0876001339989984e-06 5.963530747576794 0.5580042671060639 YSHSYLS(ph)DS(ph)DTEAK ddPTM_KYSE-520_SHP099_60min_R1 4 YSHSYLSDSDTEAK 14 0 Q92614;Q92614-2;A0A0D9SFK2;Q92614-3;Q92614-4;Q92614-5 Q92614 MYO18A Unconventional myosin-XVIIIa 2 YSHSYLS(1)DS(0.998)DT(0.002)EAK;YSHSYLS(1)DS(0.654)DT(0.346)EAK;YSHSYLS(1)DS(1)DTEAK;YSHSYLS(1)DS(0.942)DT(0.058)EAK 334.25 7.2309e-54 2197240000.0 4983470.0 4423810.0 3793130.0 4428580.0 4331130.0 4407060.0 4143200.0 4991600.0 5235200.0 4474560.0 True False 4707026.984798852 4211283.527325816 4037641.229022585 4849470.911698871 4671965.29024128 4379553.903824093 4562035.089735328 4974285.304648201 4284619.648652348 4434918.879555002 1.0613558246799666 0.9495739700538502 0.9104205372585575 1.093474546751003 1.0534499992275086 0.9875161243678793 1.0286625784219714 1.121618103902572 0.966110038315349 1.0 22.080476285319726 -5.264923090827375 24.993755405640115 1.0393225391022987 0.9713624981900548 0.20017092723702634 0.05647647541387811 446.7286969485823 3205052.196007504 0.015639219093108423 0.024283911764892755 5.4334654416603054e-06 5.264923090827375 -0.06796004091224384 YSIS(ph)LSPPEQQKK ddPTM_KYSE-520_SHP099_60min_R1 1 YSISLSPPEQQKK 13 1 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 YS(0.005)IS(0.592)LS(0.404)PPEQQKK 64.52 0.020015 1020300000.0 507020.0 516970.0 471840.0 430740.0 490610.0 458690.0 419700.0 534020.0 672340.0 480950.0 True False 478894.5898806875 492133.98521220975 502255.56137069257 471677.4000932973 529218.2158109482 455827.14556758397 462127.37187727244 532167.6092612044 550260.0043121414 476689.157173438 1.0046265636087188 1.0324002084090877 1.0536332824284327 0.9894863203730954 1.1101956229694523 0.9562356070157819 0.9694522414092431 1.1163828697441531 1.1543371524851687 1.0 18.862689284509774 -7.2770407426141706 24.76906843774415 1.1015200179887727 1.0188477137827543 0.2647948855694974 0.055208277263456854 905.5241180335184 1437621.6039147114 0.02936223786353483 0.014185391991902304 5.2839567888853286e-08 7.2770407426141706 -0.08267230420601845 YSISLS(ph)PPEQQK ddPTM_KYSE-520_SHP099_60min_R1 5 YSISLSPPEQQK 12 0 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 YSISLS(1)PPEQQK;YSISLS(1)PPEQQK;YSISLS(1)PPEQQK;YSIS(0.001)LS(0.999)PPEQQK;YSISLS(1)PPEQQK 281.51 1.8367999999999998e-29 3274380000.0 6917330.0 6126790.0 4991650.0 5228010.0 5038650.0 6561600.0 5779330.0 6834020.0 6741600.0 6432050.0 True False 6533611.915544519 5832449.811900719 5313419.745922384 5724878.498541485 5435163.089003154 6520646.6204980705 6363561.077225353 6810314.379692257 5517495.381906073 6375067.041059173 1.0248695226990123 0.9148844669924755 0.8334688422413196 0.8980107129336692 0.8525656364078236 1.0228357723144368 0.998195161908147 1.0682733743550987 0.8654803700682934 1.0 22.604009082949794 -6.2693858949149694 24.968268962290068 0.9956764125905552 0.9009867531729633 0.28815173898204005 0.06740639250185061 740.4775365956781 2326602.793570526 0.023538298517418337 0.021125218907557485 5.377917121642877e-07 6.2693858949149694 -0.09468965941759189 YSISLS(ph)PPEQQKK ddPTM_KYSE-520_SHP099_60min_R1 1 YSISLSPPEQQKK 13 1 A0A0U1RQT1;A0A087X1H5;Q15057;H7C3K3 A0A0U1RQT1 ACAP2 Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 1 YS(0.003)IS(0.03)LS(0.967)PPEQQKK 65.71600000000001 0.018974 880330000.0 1034700.0 924040.0 836780.0 877000.0 855400.0 927950.0 875640.0 975980.0 1074600.0 910450.0 True False 977303.1283766864 879647.7313876828 890720.1776953381 960349.8163203358 922715.1134397703 922158.3198444253 964158.2366228625 972594.553175444 879479.7284615332 902384.1213193814 1.0830234101945029 0.9748040890851941 0.987074303117181 1.0642361646570226 1.0225303079254795 1.0219132828890338 1.0684565628361908 1.07780548238527 0.9746179123538217 1.0 19.783382156207946 -5.256365354038821 24.949670790926234 1.0366410319812596 1.010950952790462 0.030936256705294984 0.04018060866861515 1173.6946048236018 5771225.554092201 0.01080547342340656 0.01796705717961376 5.541593254202551e-06 5.256365354038821 -0.025690079190797466 YSLS(ph)PSK ddPTM_KYSE-520_SHP099_60min_R1 10 YSLSPSK 7 0 P49792;Q7Z3J3;J3KNE0;A6NKT7;A0A1W2PNU4;A0A286YES2;F8VYC4;P0DJD0;P0DJD1;J3KQ37;Q99666;O14715;F8W705;Q99666-2 P49792;Q99666 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2;RGPD8;RGPD5 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2;RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 YSLS(1)PSK;YSLS(0.999)PS(0.001)K;YSLS(0.988)PS(0.012)K;YSLS(1)PSK;YSLS(0.985)PS(0.015)K;YSLS(1)PSK;YSLS(0.999)PS(0.001)K;YSLS(0.996)PS(0.004)K;YSLS(1)PSK;YSLS(1)PSK 169.41 0.00065718 65411600000.0 122873700.0 108586100.0 98270500.0 96799800.0 102647300.0 108071000.0 101783900.0 101697300.0 123560500.0 101624800.0 True False 116057650.91835175 103369460.76494096 104605173.66835931 105999623.88807884 110725058.52675493 107396488.80209798 112073209.92713639 101344535.80262828 101125027.90672931 100724483.33489808 1.1522288035221042 1.0262595283933957 1.0385277760180547 1.0523719792698412 1.0992864382198517 1.0662401557823453 1.112670983424209 1.0061559260191844 1.0039766356556972 1.0 26.58583916431644 -7.289264077473858 20.817732576793954 1.0037994555500778 1.074055464939581 0.48552701843948254 0.03512374242264042 88.23505338039215 66012.65432828074 0.019158836043198863 0.009212617708046265 5.137311767717696e-08 7.289264077473858 0.07025600938950327 YSMYLT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 YSMYLTPK 8 0 Q14134-2;Q14134;E9PRL4;H0YD78;E9PIQ2;H0YF27 Q14134-2 TRIM29 Tripartite motif-containing protein 29 1 YSMY(0.025)LT(0.975)PK;YSMYLT(1)PK;YS(0.001)MYLT(0.999)PK 125.68 0.0041143 1353340000.0 3489220.0 3429200.0 2789200.0 2555060.0 2480430.0 2786140.0 2551360.0 3081540.0 3862000.0 2873020.0 True False 3295666.0110123763 3264456.0846658577 2968996.2948777876 2797892.134193199 2675625.729283854 2768750.666793839 2809276.3676740457 3070850.8569768462 3160758.153097371 2847567.2779757357 1.1573619476886188 1.1464017408524507 1.0426430721553919 0.9825552343690895 0.9396180908448594 0.9723214226432868 0.986553114794566 1.0784120469174086 1.109985417216999 1.0 21.441298497457854 -4.818731233935989 3.3292314960849936 1.0078921782894281 1.1567086884689761 0.5811844153784684 0.047496334831843325 0.17918902148552115 3.9693071308825294 0.014531734340640631 0.03761478205019676 1.517989494855454e-05 4.818731233935989 0.148816510179548 YSPIYSPDPYYASESEYWTYHGS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 1 YSPIYSPDPYYASESEYWTYHGSPK 25 0 A0A0C4DGA7;O94929-2;O94929-3;O94929 A0A0C4DGA7 ABLIM3 Actin-binding LIM protein 3 1 YSPIYSPDPYYASESEYWT(0.007)YHGS(0.992)PK 95.302 0.0023967 136360000.0 95820.0 100470.0 80584.0 94252.0 99259.0 79256.0 70874.0 61873.0 112520.0 56059.0 True False 90504.6735875656 95643.27039145534 85778.57357895876 103209.6817421028 107070.11859354474 78761.33390547962 78038.63558358318 61658.37700426676 92089.20439837297 55562.36087324201 1.6288845931878189 1.7213680068356434 1.543825212442843 1.8575467298367987 1.9270260822395704 1.4175303688978034 1.4045233924025968 1.1097148507589873 1.657402654441952 1.0 15.761820281024184 -6.440667732426199 4.818425475773132 1.3139728123251555 1.7302490888097604 0.5479027463439143 0.1917843206461498 0.17992085001603467 7.337496537059019 0.06798320407717169 0.05873753184826931 3.6252024729219645e-07 6.440667732426199 0.41627627648460486 YSPKT(ph)PPR ddPTM_KYSE-520_SHP099_60min_R1 3 YSPKTPPR 8 1 P49792;Q7Z3J3;J3KNE0;A6NKT7;A0A1W2PNU4;A0A286YES2;F8VYC4;P0DJD0;P0DJD1 P49792 RANBP2;RGPD4;RGPD3;RGPD1;RGPD2 E3 SUMO-protein ligase RanBP2;RanBP2-like and GRIP domain-containing protein 4;RanBP2-like and GRIP domain-containing protein 3;RANBP2-like and GRIP domain-containing protein 1;RANBP2-like and GRIP domain-containing protein 2 1 YS(0.012)PKT(0.988)PPR;YS(0.003)PKT(0.997)PPR;YS(0.005)PKT(0.995)PPR 114.89 0.0032986999999999995 5260110000.0 4649790.0 4600100.0 4051530.0 3120290.0 3532620.0 4149750.0 3314260.0 3701160.0 5125790.0 4185910.0 True False 4391856.879573441 4379104.291109131 4312698.106477204 3416841.4234506004 3810617.096141686 4123849.8709783913 3649297.7448605425 3688321.5398172396 4195075.7466506995 4148826.0939886956 1.0585782050341606 1.0555044226737025 1.0394984047959843 0.8235682446177534 0.9184807966916121 0.9939799301189093 0.8795976650233838 0.8890036497700665 1.0111476479404657 1.0 21.984271754468576 -5.098410373716651 8.878546888169037 0.9262507629448438 1.054685915411267 0.4923014049162675 0.05605525647804976 0.26781218739125906 22.096620298636324 0.01502511388396069 0.026115544090341426 7.972410019492733e-06 5.098410373716651 0.12843515246642334 YSPPAIS(ph)PLVSEK ddPTM_KYSE-520_SHP099_60min_R1 6 YSPPAISPLVSEK 13 0 Q14694;Q14694-3;Q14694-2 Q14694 USP10 Ubiquitin carboxyl-terminal hydrolase 10 1 YSPPAIS(1)PLVSEK;YSPPAIS(1)PLVSEK;YSPPAIS(1)PLVSEK;YSPPAIS(1)PLVSEK;YSPPAIS(1)PLVSEK;YSPPAIS(1)PLVSEK 199.04 1.2158e-08 3446509000.0 3764720.0 3987780.0 3031100.0 2822810.0 2872680.0 3712900.0 2959740.0 3626730.0 4494400.0 3942220.0 True False 3555883.4768167445 3796201.06302019 3226489.5559314773 3091089.0136912237 3098743.5726866447 3689726.413869675 3258939.4034787696 3614149.7201151447 3678330.2546040537 3907294.9978007507 0.910062710601119 0.9715675589268048 0.8257604193559817 0.7911071509653266 0.7930661939860684 0.9443173387078437 0.8340653585954189 0.9249748795904571 0.9414007021928031 1.0 21.89773875133613 -7.7916893187040195 1.3048542753568166 0.9979109427884587 0.8655340484238041 0.3542291559586209 0.05809905207886234 0.5002007602643685 1.7703255574210464 0.05924756181569025 0.018677096633225247 1.6155138338783664e-08 7.7916893187040195 -0.1323768943646546 YSPS(ph)QNS(ph)PIHHIPSR ddPTM_KYSE-520_SHP099_60min_R1 3 YSPSQNSPIHHIPSR 15 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 Y(0.058)S(0.454)PS(0.489)QNS(0.999)PIHHIPSR;Y(0.002)S(0.355)PS(0.643)QNS(1)PIHHIPSR;Y(0.011)S(0.477)PS(0.512)QNS(1)PIHHIPSR 171.79 1.7019e-08 13487400000.0 1859820.0 2100360.0 1747100.0 2603130.0 1840300.0 1764040.0 1782420.0 1846000.0 2009890.0 1683400.0 True False 1756652.0771407469 1999455.552895364 1859720.8614588382 2850530.6925404263 1985121.1401253291 1753029.9720225865 1962604.408342835 1839596.6568596386 1644944.6412037516 1668486.385665384 1.0528417206354386 1.1983649192906007 1.1146155446256105 1.7084530728152445 1.189773651844137 1.0506708278134897 1.1762783473718057 1.1025541908308811 0.9858903586724539 1.0 20.670108483945594 -6.003743810351684 24.999299890504766 1.0814143177667683 1.2771270169894602 0.2396024180581745 0.17178587418594438 258.2714050291351 1724625.7368603898 0.05604948115755692 0.06220856608271175 9.914166075651761e-07 6.003743810351684 0.19571269922269185 YSPS(ph)QNS(ph)PIHHIPSRR ddPTM_KYSE-520_SHP099_60min_R1 2 YSPSQNSPIHHIPSRR 16 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 2 YS(0.423)PS(0.577)QNS(1)PIHHIPSRR;Y(0.008)S(0.16)PS(0.832)QNS(1)PIHHIPSRR 172.83 1.4201e-08 3927500000.0 1161910.0 1459980.0 1545370.0 1981550.0 965510.0 1161880.0 817350.0 919980.0 1488030.0 856900.0 True False 1097456.5360898399 1389840.369325341 1644987.0228794226 2169875.9162252676 1041490.14399957 1154628.2759424963 899975.7145672829 916788.8041049473 1217841.2621837105 849308.5326581118 1.2921765105256746 1.6364375440518737 1.9368544641027532 2.554873562183731 1.226280090157555 1.3594921415999603 1.0596569797204276 1.079453189096829 1.4339209078380366 1.0 19.695929218645954 -5.947608543137122 24.999972832243383 1.1956897811638527 1.8509685845537271 0.5090530923895518 0.3185947886334995 87.35655015443268 41683.98838630297 0.10371871775626856 0.11760596729961442 1.1282139279958548e-06 5.947608543137122 0.6552788033898744 YSPS(ph)TEK ddPTM_KYSE-520_SHP099_60min_R1 1 YSPSTEK 7 0 Q96F24-3;Q96F24 Q96F24-3 NRBF2 Nuclear receptor-binding factor 2 1 YS(0.011)PS(0.811)T(0.178)EK 118.33 0.0026156999999999994 641330000.0 1022800.0 881480.0 781810.0 957080.0 926000.0 981990.0 1022300.0 1034200.0 974920.0 992380.0 True False 966063.2450987496 839132.3776715461 832206.7235402288 1048040.5954434059 998870.9317807194 975861.0361593057 1125644.060686528 1030612.601584094 797899.103733219 983588.2852599559 0.9821825448474363 0.8531337656688021 0.8460925531664725 1.0655277326390846 1.0155376459335568 0.9921438174727671 1.144426054636293 1.0478089430596562 0.8112124917412366 1.0 19.90769502667661 -5.260362115379505 24.99547983134345 1.0179119388810838 0.8897360337086127 0.2757500031540141 0.08641347821600866 119.3713483066149 2769719.8209380363 0.024192839499838702 0.03901576094262681 5.490828568407112e-06 5.260362115379505 -0.12817590517247113 YSPSQNS(ph)PIHHIPSR ddPTM_KYSE-520_SHP099_60min_R1 6 YSPSQNSPIHHIPSR 15 0 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 YSPSQNS(1)PIHHIPSR;YSPSQNS(1)PIHHIPSR;YS(0.217)PS(0.184)QNS(0.598)PIHHIPSR;YSPSQNS(1)PIHHIPSR;YSPSQNS(1)PIHHIPSR;YSPSQNS(1)PIHHIPSR 208.37 3.5412000000000003e-14 16642850000.0 4525670.0 4811400.0 5000780.0 7643980.0 4478840.0 4479000.0 4704350.0 4502700.0 5124080.0 4748770.0 True False 4274622.063400519 4580253.121941361 5323138.280330903 8370461.56095361 4831299.22688634 4451044.899599309 5179911.608031567 4487081.184638078 4193676.2395451074 4706699.59228715 0.9081994675006081 0.9731347905540866 1.1309704764361652 1.7784142363090798 1.026472824992564 0.9456828107094871 1.1005400932151836 0.9533391916473786 0.8910014665939734 1.0 22.16628434447835 -5.97537363235524 24.999995193778616 0.9832065701444691 1.2050717036231433 0.17864405063217348 0.22382840677145752 431.78876060018797 438337.6710726472 0.07468710689150004 0.08468393189092362 1.0583428195952006e-06 5.97537363235524 0.2218651334786742 YSPSQNS(ph)PIHHIPSRR ddPTM_KYSE-520_SHP099_60min_R1 1 YSPSQNSPIHHIPSRR 16 1 Q9NYF8-3;E9PK91;E9PQN2;E9PKI6;A0A1W2PQ43;E9PK09;H0YF00;Q9NYF8;Q9NYF8-2;Q9NYF8-4;E9PJA7 Q9NYF8-3;Q9NYF8;Q9NYF8-4 BCLAF1 Bcl-2-associated transcription factor 1 1 YSPSQNS(1)PIHHIPSRR 173.03 1.7936e-08 590170000.0 137870.0 239840.0 250940.0 364680.0 142870.0 140660.0 130570.0 122520.0 206300.0 156110.0 True False 130222.07626296877 228317.7263928207 267115.99391819583 399339.0775549595 154113.05618089775 139782.08876482229 143769.2898403992 122095.00671638292 168841.12039978986 154726.9868517422 0.84162484458995 1.4756167042249222 1.726369777847116 2.5809271264204354 0.996032168121824 0.9034111735062742 0.9291804407601981 0.789099621214579 1.0912195980496386 1.0 17.23936532217168 -5.959516777334159 24.99994812211119 0.9309126371875556 1.6657857353077903 0.42593089788009775 0.4009864429540074 149.6911921844212 92439.43402303502 0.12996300371752065 0.14736405489509907 1.0976988839860918e-06 5.959516777334159 0.7348730981202347 YSPT(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 2 YSPTSPK 7 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.594)S(0.406)PK;YSPT(0.628)S(0.372)PK 101.9 0.022555000000000002 7673600000.0 17774500.0 17757700.0 16552700.0 14790700.0 16557200.0 16190000.0 15904400.0 16746900.0 20279700.0 16409300.0 True False 16788513.0524127 16904593.437148895 17619713.527256433 16196403.681013906 17860157.442418683 16088952.20462441 17512171.96398592 16688808.912655858 16597417.68963462 16263926.368242208 1.0322546150476202 1.0393919066282598 1.083361614429195 0.9958483157326542 1.0981454931629153 0.9892415792068845 1.0767493388423783 1.0261242294630217 1.0205049699464703 1.0 23.9551722530009 -7.832603991085928 1.959072551538464 1.001557429506427 1.0444431224738357 0.15271401026296616 0.033471996432337205 0.548150556152156 4.290158298207099 0.028886557760877143 0.008299427063749181 1.4702663204453199e-08 7.832603991085928 0.04288569296740885 YSPTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 7 YSPTSPK 7 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPT(0.166)S(0.834)PK;YSPT(0.002)S(0.998)PK;YSPT(0.203)S(0.796)PK;YSPT(0.019)S(0.981)PK;YSPT(0.004)S(0.996)PK;YSPT(0.007)S(0.993)PK;YSPT(0.197)S(0.802)PK 135.72 0.0018131 51785300000.0 75035100.0 69685400.0 64207900.0 60261200.0 63596400.0 65268400.0 63213400.0 67389800.0 78488900.0 67584100.0 True False 70872753.4242366 66337608.78408206 68346843.9702723 65988406.3298096 68601074.86598195 64861035.70551635 69603627.37533185 67156040.51269764 64237294.304154456 66985357.45363415 1.0580335183445608 0.9903299960741354 1.020325136244597 0.9851168798417681 1.0241204566754185 0.9682867744702534 1.0390871978776857 1.0025480652123357 0.9589751663058327 1.0 25.997342430860733 -4.255361121070656 24.574310208539835 1.0001829224799244 1.0580335507214997 0.3621718544238993 0.023531667713900986 576.7283809245195 2331623.0157047436 0.005529604546990526 0.047145665205548096 5.5544220833917087e-05 4.255361121070656 0.057850628241575386 YSPTS(ph)PKYS(ph)PTSPK ddPTM_KYSE-520_SHP099_60min_R1 1 YSPTSPKYSPTSPK 14 1 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YS(0.022)PT(0.425)S(0.553)PKYS(0.958)PT(0.039)S(0.003)PK 116.96 0.0015602 0.0 189910.0 213400.0 205630.0 201580.0 198680.0 206320.0 168180.0 197920.0 249300.0 196420.0 True False 179375.31372380065 203147.94368006973 218885.23881963285 220738.10259276305 214314.9856654352 205032.28034948182 185181.2756786269 197233.46171487527 204033.4043415782 194679.87161244746 0.9213860284482114 1.0434974196227118 1.1243342057229802 1.1338516959379867 1.10085847032032 1.0531765747084685 0.9512091524658 1.0131168676107989 1.04804571038423 1.0 17.570744202737128 -6.541417075254897 23.334167005559916 1.003901204381513 1.0713750961175148 0.19173257013949352 0.059729795769688176 189.0345581251684 237933.0975166936 0.02449320684663064 0.01897721242450031 2.8746364279803853e-07 6.541417075254897 0.06747389173600182 YSPTS(ph)PTYS(ph)PTSPK ddPTM_KYSE-520_SHP099_60min_R1 2 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 Y(0.022)S(0.032)PT(0.406)S(0.481)PT(0.049)Y(0.068)S(0.532)PT(0.232)S(0.176)PK;YSPT(0.009)S(0.722)PT(0.157)Y(0.19)S(0.855)PT(0.063)S(0.004)PK 186.77 1.1853e-10 4105500000.0 4024200.0 3670400.0 3548700.0 3140800.0 3989900.0 3335200.0 3489400.0 3768400.0 4831400.0 3445500.0 True False 3800969.603956186 3494068.474617279 3777454.8801207608 3439300.6876840442 4303882.430574392 3314383.7796703735 3842142.6052622236 3755328.299951175 3954139.549682713 3414975.550558435 1.113029814615988 1.023160612100403 1.1061440482357339 1.0071230779739058 1.2602967039897544 0.9705439264794701 1.1250864166901389 1.099664769001665 1.1578822428278033 1.0 21.70344381893343 YSPTS(ph)PTYSPT(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YSPT(0.007)S(0.452)PT(0.452)Y(0.079)S(0.258)PT(0.712)S(0.039)PK 208.79 2.5693e-13 3721700000.0 1477100.0 1376800.0 1249000.0 1240600.0 1292700.0 1336200.0 1450300.0 1270000.0 1612900.0 1349100.0 True False 1395162.3184741521 1310656.4613810675 1329512.538470658 1358506.2510000106 1394428.135543126 1327860.2801617766 1596910.4775639926 1265594.6664202274 1320038.0179002488 1337148.0235839179 1.0433865913623686 0.9801880107993984 0.9942897233675037 1.0159729716077708 1.0428375250525233 0.9930540648766413 1.1942660419030058 0.9464880806749366 0.9872041050191215 1.0 20.35072775133716 -3.9301485715465283 15.160136969764666 1.0198053243362712 1.3134588839117556 0.01346252481715593 0.06383449467065906 9226981.156753203 42125362.42621385 0.015886647429017648 85158761.21259163 0.0001174495692839772 3.9301485715465283 0.29365355957548434 YSPTS(ph)PTYSPTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 2 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YSPT(0.076)S(0.924)PTYS(0.001)PT(0.356)S(0.643)PK;YSPT(0.041)S(0.887)PT(0.004)Y(0.068)S(0.001)PT(0.157)S(0.842)PK 284.24 3.5104e-36 2342430000.0 2072500.0 1966310.0 1732160.0 1767810.0 1837590.0 1816940.0 1859490.0 1724970.0 2153500.0 1831910.0 True False 1957534.2935736766 1871845.516108518 1843817.8051539925 1935822.1308885412 1982197.8785431215 1805599.803500326 2047465.396073551 1718986.481681023 1762478.6853172458 1815680.7026044151 1.0781269475220983 1.0309331995562545 1.0154967239059254 1.066168808266671 1.0917106051189804 0.9944478679045115 1.1276571883683422 0.9467449200816566 0.9706985830653725 1.0 20.792079088433944 -7.2854437132447245 24.99493456509231 0.9690413029756612 1.0543223607794492 0.5098026194614349 0.03818459608955631 637.9665133157728 664290.1187072045 0.019876787707138792 0.00955650916792959 5.1827025809401394e-08 7.2854437132447245 0.08528105780378803 YSPTS(ph)PTYSPTT(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 3 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 Y(0.001)S(0.002)PT(0.142)S(0.852)PT(0.001)Y(0.002)S(0.001)PT(0.039)T(0.96)PK;YSPT(0.096)S(0.903)PTYSPT(0.066)T(0.934)PK;YSPT(0.09)S(0.91)PTYSPT(0.04)T(0.96)PK 190.34 2.1677000000000002e-10 2354870000.0 3098900.0 3054200.0 2714550.0 2629540.0 2793030.0 2832700.0 2876590.0 2992420.0 3570000.0 3211180.0 True False 2926997.8394960035 2907471.6475523366 2889534.2364335638 2879450.690999973 3012825.5708331508 2815020.0685632904 3167383.7900129706 2982039.9934560778 2921777.9923763927 3182731.443460237 0.9196496441791513 0.9135146019079008 0.9078787474736129 0.9047105425487801 0.9466163339114889 0.8844667288367962 0.9951778358558018 0.936943643040781 0.918009591534956 1.0 21.6018339978865 -13.999999999988567 0.12186913679019462 1.2503088852048392 0.8895571520507164 0.43329868696529306 0.027272192980459645 141.8245782104123 1.1132926926160265 8.676431919724429 0.2476729440849477 1.0000000000263246e-14 13.999999999988567 -0.3607517331541228 YSPTS(ph)PTYSPTTPK ddPTM_KYSE-520_SHP099_60min_R1 6 YSPTSPTYSPTTPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YS(0.005)PT(0.31)S(0.685)PTYSPTTPK;YSPTS(0.996)PT(0.003)YSPTTPK;YSPT(0.051)S(0.946)PT(0.003)YSPTTPK;YSPT(0.146)S(0.84)PT(0.014)YSPTTPK;YSPT(0.019)S(0.963)PT(0.019)YSPTTPK;YSPT(0.02)S(0.978)PT(0.002)YSPTTPK 228.93 1.5803e-14 17292720000.0 22610100.0 28988800.0 19412210.0 17066260.0 17928270.0 27216700.0 19577780.0 25980800.0 28736200.0 26790700.0 True False 21355872.680883102 27596134.534924068 20663552.117234185 18688232.219241843 19339122.85109753 27046830.479777765 21556893.063119933 25890678.66876428 23518430.460651655 26553355.240849227 0.8042626812008147 1.0392710934123552 0.7781898720447098 0.7037992769551091 0.7283118338787768 1.0185842894222792 0.8118331136532674 0.9750435842825054 0.8857046594424838 1.0 24.662390833470592 -6.260697577299703 24.999983493398304 0.9287733502928057 0.8157091420206525 0.2809694442313344 0.10123778359814567 113.12657033304457 3812596.712373957 0.03638291609091137 0.034383051780035985 5.486588927423499e-07 6.260697577299703 -0.11306420827215324 YSPTSPT(ph)YSPT(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YSPT(0.007)S(0.331)PT(0.61)Y(0.052)SPT(0.908)S(0.092)PK 204.33 4.1186999999999996e-11 359390000.0 476340.0 524760.0 508090.0 421050.0 567960.0 444990.0 477770.0 507730.0 636150.0 573380.0 True False 449916.4706397518 499549.74191918183 540842.2943727437 461066.4654067013 612655.2207496507 442212.6523493403 526067.654185858 505968.8031350733 520641.1960364825 568300.2992828898 0.7916879002307042 0.8790242457192774 0.9516839865388176 0.8113077997468916 1.078048386606043 0.778132006805815 0.9256860410766576 0.8903194381096234 0.9161374658669967 1.0 19.11629394958996 -9.806595337081381 0.014911079688091694 1.9143149868085636 5.515215144790174e-06 0.16324686158261226 0.08193324936648479 4402.098083245078 13.52840080898723 940.5473550908528 798.9274681873591 1.5610063255261366e-10 9.806595337081381 -1.9143094715934188 YSPTSPTY(ph)S(ph)PTSPK ddPTM_KYSE-520_SHP099_60min_R1 2 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 YSPT(0.001)S(0.015)PT(0.124)Y(0.86)S(0.997)PT(0.002)S(0.001)PK;YSPTS(0.018)PT(0.306)Y(0.675)S(0.99)PT(0.01)SPK 213.67 4.0776999999999995e-14 4847300000.0 1809560.0 1563490.0 1442770.0 1561600.0 1489670.0 1590550.0 1511350.0 1608880.0 2001610.0 1555560.0 True False 1709180.0995315714 1488377.5935536658 1535773.2627136211 1710013.9944878411 1606898.5539371294 1580622.7874654348 1664132.0073545757 1603299.1707954165 1638168.0804819374 1541778.9486073672 1.10857662252777 0.9653638058153946 0.996104703661202 1.1091174879722119 1.0422366678365809 1.0251941686537838 1.0793583664232318 1.0399021028556774 1.0625181268440815 1.0 20.556164504091672 -5.170835032795206 24.742079369460065 1.0525880199263946 1.0175500128710415 0.07282660813722697 0.04389086402801086 129.594018187911 35383.75646397857 0.01142718725373388 0.019792510387363148 6.747842965306161e-06 5.170835032795206 -0.03503800705535309 YSPTSPTY(ph)SPT(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 1 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 2 Y(0.006)S(0.008)PT(0.062)S(0.363)PT(0.064)Y(0.498)S(0.01)PT(0.527)S(0.462)PK 127.36 4.7897e-05 1144500000.0 715610.0 721370.0 591940.0 578660.0 680970.0 602600.0 578160.0 677640.0 752990.0 585530.0 True False 675913.6867668313 686714.3024015556 630097.3995374872 633655.6724195268 734558.4648107083 598838.9498768803 636606.0550978414 675289.425002365 616265.9973331932 580342.6597354467 1.164680340878183 1.1832910968747312 1.0857333834888538 1.091864714388536 1.2657323263906912 1.0318713260711616 1.0969485775663 1.163604662993757 1.0619002187675164 1.0 19.14654545662241 -13.999999997921707 0.12209748666879866 0.5614386352487938 1.1908615065877517 0.33170463686661256 0.06165717652802352 187.21178861590724 1.4714348932530148 20.025944673932973 0.5680319673538674 1.0000000047854467e-14 13.999999997921707 0.6294228713389579 YSPTSPTYSPT(ph)SPK ddPTM_KYSE-520_SHP099_60min_R1 2 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPTSPT(0.004)YS(0.172)PT(0.762)S(0.062)PK;YSPTSPTYS(0.093)PT(0.841)S(0.066)PK 288.22 4.6866e-32 7579000000.0 1886140.0 2144860.0 1491400.0 1366460.0 1365150.0 1924770.0 1532810.0 1873730.0 2274790.0 2013070.0 True False 1781512.0542731269 2041817.7060995048 1587538.030324373 1496327.9475588214 1472579.538359015 1912756.796472819 1687761.3935839958 1867230.467961871 1861745.4787893237 1995235.7659447612 0.8928829788842351 1.0233465843735448 0.7956643808320367 0.7499504435007446 0.7380478856150295 0.9586620434137578 0.8458957193887442 0.9358445251595224 0.9330954820308022 1.0 20.928127801116354 -7.614787326060655 1.0378812249758278 0.9931657105507309 0.8522267557067605 0.24150749952769623 0.08355334393864833 0.8065943071563307 1.6793373282921713 0.0853970613351278 0.030119811437275282 2.4277986966688073e-08 7.614787326060655 -0.14093895484397034 YSPTSPTYSPTS(ph)PK ddPTM_KYSE-520_SHP099_60min_R1 4 YSPTSPTYSPTSPK 14 0 P24928 P24928 POLR2A DNA-directed RNA polymerase II subunit RPB1 1 YSPTSPTYSPT(0.008)S(0.991)PK;YSPTSPTYS(0.01)PT(0.223)S(0.767)PK;YSPTSPTYSPT(0.044)S(0.956)PK;YSPTSPTYSPT(0.024)S(0.976)PK 249.36 1.7315999999999998e-26 10802570000.0 16644300.0 18245200.0 13101320.0 11863990.0 11679840.0 17433300.0 13244840.0 17949500.0 20622800.0 17934600.0 True False 15721007.49941054 17368673.20539646 13945852.05005317 12991540.042561341 12598976.95880097 17324492.308145702 14583757.684381627 17887237.37394478 16878219.378481735 17775713.396907672 0.8844093707173195 0.9771013302013508 0.7845452803305909 0.7308589957813675 0.7087747578666932 0.9746158661153669 0.8204316394366862 1.0062739522486062 0.9495100985042846 1.0 24.083404125239223 -7.260443681944584 24.969599423799487 0.9834190250874104 0.8391579957298453 0.3759077956074032 0.08569344641828729 104.06420715131598 2609755.1744560893 0.0466835481962168 0.024953795787365653 5.489797411003269e-08 7.260443681944584 -0.14426102935756513 YSQKEDKYEEEIK ddPTM_KYSE-520_SHP099_60min_R1 6 YSQKEDKYEEEIK 13 2 J3KN67;A0A2R2Y2Q3;P06753;P06753-7;A0A494C034;P06753-5;P06753-2;P06753-6;P06753-4;P06753-3 J3KN67;P06753-5;P06753-4 TPM3 Tropomyosin alpha-3 chain 0 ;;;;; 153.2 2.9232e-06 36651600000.0 12485370.0 11676680.0 7702550.0 7292200.0 11644010.0 10367210.0 8325190.0 9353750.0 9834040.0 8303180.0 False True 11792781.637131957 11115714.765746001 8199068.697515743 7985248.495520119 12560327.341645785 10302504.396868704 9166781.451224577 9321304.024431672 8048426.231974556 8229620.284976291 1.432967892657265 1.3506959471797824 0.9962876066692504 0.9703058244494842 1.5262341282714444 1.25188089366366 1.1138765986517185 1.1326529902537936 0.9779826958319674 1.0 22.972394435497257 -1.0000000144258743 0.10041232562672568 0.8746460080868208 2.192696425744626 0.25608256877845803 0.16713491497371583 218.9015542454158 1.5601556272896755 2.3196218885698157 39.76154451845877 0.09999999667831976 1.0000000144258743 1.3180504176578052 YSQKEDRYEEEIK ddPTM_KYSE-520_SHP099_60min_R1 2 YSQKEDRYEEEIK 13 2 P09493-4;P09493-9;P09493-8;P09493-7;P09493-6;A0A0S2Z4G6;P09493-3;P09493-10;P09493;Q6ZN40;H0YKJ4;B7Z596;A0A494BZZ2;P09493-5;H7BYY1;F5H7S3;H0YK48;P09493-2;A0A494C0V8;H0YL42 P09493-4 TPM1 Tropomyosin alpha-1 chain 0 ; 78.69 0.0078078 1303910000.0 1931300.0 1951640.0 1546220.0 1487360.0 2137790.0 2083980.0 1661560.0 1885020.0 2182030.0 1732290.0 False True 1824166.9390488998 1857880.284928639 1645891.8152394737 1628718.2472089096 2306021.9106387696 2070973.1078068712 1829526.7000629068 1878481.305586976 1785828.3565000165 1716943.2583012278 1.0624503344704361 1.082086013003631 0.9586174774744428 0.9486150688639475 1.3430973327099849 1.206197757435459 1.065572022381841 1.0940846743214896 1.040120777355767 1.0 20.711410931133592 YSQSAPGSPVS(ph)AQPVIMAVPPRPSSLVAK ddPTM_KYSE-520_SHP099_60min_R1 1 YSQSAPGSPVSAQPVIMAVPPRPSSLVAK 29 1 P85037;P85037-2 P85037 FOXK1 Forkhead box protein K1 1 YSQSAPGS(0.427)PVS(0.573)AQPVIMAVPPRPSSLVAK 136.39 1.6616e-06 704730000.0 181100.0 169850.0 121320.0 166720.0 144900.0 236890.0 175590.0 219480.0 226330.0 182630.0 True False 171054.02198610044 161690.15104995252 129140.48131886339 182565.01867380406 156302.80563177762 235411.48164011634 193340.35079325776 218718.67510701713 185234.1773149996 181012.04028398977 0.9449869838367315 0.8932563314367202 0.7134358638036171 1.0085794203931286 0.8634939719289069 1.3005294082690815 1.0681076821736615 1.208310092322419 1.0233251723166354 1.0 17.46572613793468 -6.236389370686695 24.75897933726394 1.1298271834542901 0.8825849308006669 0.542809986905989 0.10777953765888124 494.6130643897316 488866.90432509367 0.03412132643844976 0.03410710098590635 5.802439612200642e-07 6.236389370686695 -0.2472422526536232 YSS(ph)DDTLDR ddPTM_KYSE-520_SHP099_60min_R1 1 YSSDDTLDR 9 0 O95171-3;O95171-2;O95171;F2Z2X8 O95171-3 SCEL Sciellin 1 Y(0.002)S(0.258)S(0.734)DDT(0.005)LDR 94.363 0.005436 673880000.0 1606800.0 1226400.0 1217200.0 1000900.0 1171200.0 1165600.0 943220.0 1094900.0 1499800.0 1117000.0 True False 1517667.6009236127 1167481.9031360706 1295662.6595888592 1096025.2350684423 1263366.7767835604 1158325.0580426324 1038569.8825401018 1091102.0474515804 1227474.1268812632 1107104.2490128498 1.370844346660978 1.054536557128253 1.170316761717912 0.9899927997256933 1.141145269661861 1.0462655699094767 0.9380958328595914 0.9855458945482887 1.1087249714520935 1.0 20.078359647317665 -1.0000000000919087 0.8602415321556962 1.0314675580895167 122.88268455005624 0.6518581415894045 0.07047269040857412 454.80127859129703 1.2009183797875003 0.023894161566672765 108530.72054503392 0.09999999997883724 1.0000000000919087 121.85121699196672 YSS(ph)PPASTTR ddPTM_KYSE-520_SHP099_60min_R1 1 YSSPPASTTR 10 0 Q08999;F5H837 Q08999 RBL2 Retinoblastoma-like protein 2 1 YS(0.371)S(0.629)PPASTTR 104.82 0.0020258 0.0 681530.0 606880.0 553930.0 522300.0 597830.0 649580.0 601070.0 579180.0 717810.0 537590.0 True False 643724.1723036274 577724.5738545486 589637.2141193363 571939.2349647783 644875.8198125995 645525.7302705332 661832.0214778946 577170.9597616288 587473.798517562 532827.3708386907 1.2081289504523405 1.084262193485271 1.1066196040027463 1.0734043824823114 1.2102903399980003 1.2115100792484648 1.2421134080183338 1.083223181371369 1.1025593478669382 1.0 19.0233086686309 -7.987466092441704 1.665749795942638 1.0039606377111798 1.1555052380711377 0.39992510330714137 0.05868814248081775 0.4258043195950123 2.682832195313052 0.060631471652564224 0.017573769801607828 1.029280885201916e-08 7.987466092441704 0.15154460035995787 YSS(ph)PTAGSAK ddPTM_KYSE-520_SHP099_60min_R1 9 YSSPTAGSAK 10 0 P28749;P28749-2 P28749 RBL1 Retinoblastoma-like protein 1 1 Y(0.003)S(0.224)S(0.767)PT(0.005)AGSAK;YSS(0.999)PT(0.001)AGSAK;YSS(0.994)PT(0.006)AGSAK;YSS(0.996)PT(0.004)AGSAK;YS(0.003)S(0.994)PT(0.002)AGSAK;YSS(0.991)PT(0.009)AGSAK;YSS(0.997)PT(0.003)AGSAK;YSS(0.995)PT(0.005)AGSAK;YSS(0.942)PT(0.057)AGSAK 265.36 7.953199999999999e-20 26935120000.0 56320200.0 58366600.0 49009300.0 42221000.0 44465300.0 54693000.0 47680400.0 51420600.0 59246600.0 54991700.0 True False 53196006.23446474 55562580.92594729 52168517.8956525 46233671.14579343 47964466.13705093 54351640.6996618 52500400.147860624 51242233.940258205 48488910.92524568 54504516.32089517 0.9759926300652485 1.0194124207767072 0.957141195208678 0.8482539478672342 0.8800090226406245 0.9971951751606543 0.9632302732266199 0.9401465676453252 0.8896310654289153 1.0 25.699872442794717 -4.991887213890921 15.510661776768128 0.9285147447131852 0.9953522764766056 0.23599423492038496 0.04735803891790313 2.7837557139394735 5303.827159322334 0.013052474366500248 0.026797900081127386 1.0188559501957261e-05 4.991887213890921 0.06683753176342044 YSS(ph)QDADEQDWEFQKR ddPTM_KYSE-520_SHP099_60min_R1 3 YSSQDADEQDWEFQKR 16 1 Q9C0C2;Q9C0C2-2;A0A2R8Y5C4 Q9C0C2 TNKS1BP1 182 kDa tankyrase-1-binding protein 1 YS(0.122)S(0.878)QDADEQDWEFQKR;YS(0.006)S(0.994)QDADEQDWEFQKR;YS(0.198)S(0.802)QDADEQDWEFQKR 254.26 4.4024e-24 2569840000.0 1385200.0 1350320.0 1262810.0 1443790.0 1396880.0 1454980.0 1384910.0 1621380.0 1904820.0 1430040.0 True False 1308360.1946722597 1285448.6003283567 1344212.7531674406 1581007.3675087064 1506806.5088400128 1445898.930122572 1524910.2182190933 1615755.8112129362 1558952.7046045924 1417370.958154284 0.9230894616156244 0.9069246077980051 0.9483845745773494 1.1154506577216112 1.0630996071784855 1.0201273857095516 1.0758723462239188 1.139966782808215 1.099890396113857 1.0 20.434785963041744 -5.150532034703867 4.697825902303425 1.076508609893605 0.9181377520775887 0.7456103141297815 0.03962113209552724 0.11145259799180807 3.8654155361626583 0.011319677818284036 0.020282195587927578 7.070790427467423e-06 5.150532034703867 -0.15837085781601623 YSS(ph)YQGSR ddPTM_KYSE-520_SHP099_60min_R1 1 YSSYQGSR 8 0 Q5VWV2;Q8TEW0-4;Q8TEW0-11;Q8TEW0-2;Q8TEW0;Q8TEW0-3;Q8TEW0-7;Q8TEW0-6;Q8TEW0-5 Q5VWV2 PARD3 Partitioning defective 3 homolog 1 YS(0.029)S(0.971)YQGSR 125.74 0.00087054 258780000.0 416790.0 429200.0 435310.0 406770.0 392810.0 383140.0 389480.0 398650.0 503130.0 412040.0 True False 393669.82784973347 408580.5877576655 463370.77912062657 445429.29850014055 423721.9122168293 380748.6811414331 428852.43935849424 397267.1761956098 411774.27487516403 408389.64616226923 0.9639564360877871 1.000467547591352 1.1346291059898985 1.090696844755839 1.037543229116215 0.9323171748339248 1.0501060528554496 0.972765053984155 1.0082877436896378 1.0 18.639586764698315 -6.0198938670356235 24.259269728939813 0.9935088599873516 1.05203666252596 0.2085782277715038 0.05135381356249179 854.9785502087457 1042589.3233752198 0.01775124396337814 0.017995025690020098 9.552259958022818e-07 6.0198938670356235 0.05852780253860845 YSSEVAT(ph)ESPLDFTK ddPTM_KYSE-520_SHP099_60min_R1 1 YSSEVATESPLDFTK 15 0 Q8WTT2 Q8WTT2 NOC3L Nucleolar complex protein 3 homolog 1 YSSEVAT(0.743)ES(0.257)PLDFTK 104.17 0.0037302 121840000.0 137300.0 128230.0 129760.0 119960.0 123000.0 133920.0 131380.0 150330.0 154020.0 129710.0 True False 129683.69529923583 122069.63832284603 138124.5372233407 131360.9623327108 132679.40022573277 133084.1556048982 144661.1725452372 149808.54031728578 126053.85052823852 128560.8703128529 1.0087338004452717 0.9495084937258867 1.0743901848767408 1.0217802820799506 1.032035641193603 1.0351839971294368 1.1252348571785817 1.1652732277926143 0.9804993558419949 1.0 16.972092075144495 -6.576053088812664 8.15913877709951 1.0815963415454417 1.0185685735305685 0.12610069835466708 0.058275595396414956 0.4270872733165477 58.19943403928688 0.02212391078944491 0.017128058882268402 2.654281078819847e-07 6.576053088812664 -0.0630277680148732 YSSEVATES(ph)PLDFTK ddPTM_KYSE-520_SHP099_60min_R1 4 YSSEVATESPLDFTK 15 0 Q8WTT2 Q8WTT2 NOC3L Nucleolar complex protein 3 homolog 1 YSSEVAT(0.125)ES(0.875)PLDFTK;YSSEVATES(1)PLDFTK;YSSEVATES(1)PLDFTK;YSSEVAT(0.005)ES(0.995)PLDFTK 414.86 7.717699999999998e-97 912596000.0 1921300.0 1588830.0 1456930.0 1436450.0 1438680.0 1536010.0 1443840.0 1741100.0 1933830.0 1515000.0 True False 1814721.6589834038 1512500.2219175491 1550846.0389704222 1572969.776115561 1551895.931030544 1526423.1918360188 1589797.4377204697 1735060.5304757957 1582695.2198871803 1501578.2786521644 1.2085428277587504 1.0072736422873594 1.0328106506458532 1.0475443061999261 1.0335098430056842 1.016545866131039 1.0587509557926555 1.1554912288909827 1.0540211205691037 1.0 20.518048255194664 -10.223958470421826 13.580222133280465 1.0000024611700036 1.064570524023464 0.09915946887288518 0.06082138118140331 0.0 0.0 0.05839539248620157 0.014162963015882884 5.970923810443373e-11 10.223958470421826 0.0645680628534604 YSSLQKT(ph)PVWK ddPTM_KYSE-520_SHP099_60min_R1 1 YSSLQKTPVWK 11 1 C9J5J4;H7C4T7;H0Y322;Q5TKA1-3;Q5TKA1;Q5TKA1-2 C9J5J4 LIN9 Protein lin-9 homolog 1 YS(0.001)S(0.006)LQKT(0.993)PVWK 89.46600000000001 0.0083686 384330000.0 417370.0 515900.0 452270.0 390880.0 430130.0 413970.0 343780.0 400880.0 600380.0 473340.0 True False 394217.65409353195 491115.38961831294 481424.0478575857 428029.11767764314 463978.7838950761 411386.2596756254 378532.6373694756 399489.440846095 491366.1263481623 469146.5758529479 0.8402867555343682 1.0468271855665234 1.0261697998803814 0.9123569044481465 0.9889846964171564 0.8768821533604729 0.8068536718642174 0.8515237271417565 1.0473616384278568 1.0 18.83967921001061 -6.259993124296573 24.89261259713 0.9003900606438979 0.9682905511240224 0.05139182250444585 0.08524798260807893 273.592926029353 4709047.720809256 0.029070553898770845 0.027527345467260038 5.495495741983788e-07 6.259993124296573 0.06790049048012448 YSSSS(ph)IPEPFGSR ddPTM_KYSE-520_SHP099_60min_R1 4 YSSSSIPEPFGSR 13 0 Q8WUF5;K7EN03 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 YSSS(0.001)S(0.999)IPEPFGSR;YSSS(0.038)S(0.962)IPEPFGSR;YSSS(0.027)S(0.973)IPEPFGSR;YSS(0.001)S(0.052)S(0.947)IPEPFGSR 226.54 9.9865e-12 1144660000.0 2978540.0 3207170.0 2801870.0 2656730.0 2904090.0 2767500.0 2973550.0 2924840.0 3596670.0 2798180.0 True False 2813314.448627718 3053092.7391396845 2982483.02335051 2909224.8204249972 3132625.360988195 2750227.005948001 3274145.453051377 2914694.412702786 2943605.392672378 2773390.302151099 1.0143954301872524 1.1008521724373388 1.0753924613629875 1.0489777865627288 1.1295292114342745 0.991648021490112 1.1805570425885898 1.050949954805167 1.0613743728710874 1.0 21.403219231988643 -4.24339873168322 22.160231045452463 1.0748405454588845 1.014395180803494 0.08738056167066577 0.05365335313664967 1719.0140494147756 2111383.5815314963 0.012283132523771287 0.3132561471146375 5.709541951316519e-05 4.24339873168322 -0.06044536465539063 YSSSS(ph)IPEPFGSRGSPR ddPTM_KYSE-520_SHP099_60min_R1 1 YSSSSIPEPFGSRGSPR 17 1 Q8WUF5;K7EN03 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 YSS(0.001)S(0.001)S(0.533)IPEPFGS(0.278)RGS(0.186)PR 182.57 1.979e-09 1180800000.0 1269300.0 1411800.0 1244600.0 875970.0 1059000.0 804480.0 666820.0 706620.0 1280000.0 783330.0 True False 1198889.398713182 1343975.008844998 1324828.9074304085 959221.9254300167 1142337.2751142345 799458.9419132957 734228.6731360572 704168.9001463476 1047584.2661741695 776390.3056215178 1.5441838853892491 1.731055886599609 1.7063954789722076 1.2354893131517635 1.4713440737771293 1.0297126794664326 0.9456953130658822 0.9069779659119321 1.3493010649270727 1.0 19.56642257842466 -5.772211696434651 1.1391882564625722 1.0321092508564609 1.6698736043638744 0.704883148026722 0.16197123562511 0.2592457737406168 0.7136443476044048 0.06915791562139056 0.1014773625557806 1.689617128606482e-06 5.772211696434651 0.6377643535074136 YSSSSIPEPFGS(ph)RGSPR ddPTM_KYSE-520_SHP099_60min_R1 2 YSSSSIPEPFGSRGSPR 17 1 Q8WUF5;K7EN03 Q8WUF5 PPP1R13L RelA-associated inhibitor 1 YSSSSIPEPFGS(0.888)RGS(0.112)PR;YSSS(0.02)S(0.079)IPEPFGS(0.654)RGS(0.247)PR 242.67 3.737699999999999e-23 1858910000.0 1515460.0 1730430.0 1531470.0 1058570.0 1233840.0 1192130.0 928440.0 851800.0 1570580.0 1172140.0 True False 1431394.412805388 1647297.545371616 1630191.0066386396 1159176.1745293254 1330936.1884107164 1184689.4744718287 1022295.7759012026 848845.3046116135 1285402.2630998653 1161755.7515111216 1.2320958264622675 1.4179379299211037 1.4032132008111118 0.9977795875093014 1.1456247896165248 1.0197405719152899 0.8799575767724667 0.7306572861873087 1.1064307290305333 1.0 20.147875356549427 -5.61312160489619 1.0873425849915306 0.9233019087331299 1.367834772540993 0.6246990710838407 0.12612723422471986 0.3234908009310518 0.7973301637959402 0.05289363834792983 0.09490792485097514 2.4371283131932858e-06 5.61312160489619 0.44453286380786305 YSTSPYLLEAASHLS(ph)PENFVEDEAK ddPTM_KYSE-520_SHP099_60min_R1 2 YSTSPYLLEAASHLSPENFVEDEAK 25 0 Q9BX63;Q9BX63-2 Q9BX63 BRIP1 Fanconi anemia group J protein 1 YSTSPYLLEAASHLS(1)PENFVEDEAK;YSTSPYLLEAASHLS(1)PENFVEDEAK 314.47 3.3981999999999995e-61 551590000.0 324458.0 363050.0 263100.0 271181.0 240136.0 330160.0 255603.0 303250.0 357500.0 313420.0 True False 306459.6679490126 345608.53305083985 280059.8469748839 296953.9607064593 259033.33701306104 328099.3489733662 281441.84568488545 302198.0965290823 292587.0118416133 310643.34263707005 0.9865322248578 1.1125573466888046 0.9015478799495236 0.9559321573918155 0.8338608991717364 1.0561930804250015 0.9059967076574333 0.9728136903360118 0.9418743996179816 1.0 18.24489961081071 -4.7683201827515695 24.999739668713673 0.9439090337167609 1.0495447913910012 0.2994769060834829 0.06326268381912424 160.1972912143666 582045.530623873 0.015519382248097615 0.03347572224860336 1.704825046664984e-05 4.7683201827515695 0.10563575767424027 YSVDIPLDK ddPTM_KYSE-520_SHP099_60min_R1 2 YSVDIPLDK 9 0 K7ELC7;P61353 K7ELC7 RPL27 60S ribosomal protein L27 0 ; 156.62 0.016137000000000002 232460000.0 856970.0 1119150.0 811840.0 617040.0 984280.0 1120630.0 769370.0 925460.0 941630.0 1072690.0 False True 809432.165772659 1065384.3541216012 864172.5053899265 675683.2960801598 1061737.23621288 1113635.732493409 847145.4279276076 922249.7952639883 770653.7285606116 1063186.801140191 0.7613263867690997 1.0020669490808702 0.8128134251320313 0.635526414883573 0.9986365849108015 1.0474506749887367 0.7967982926604292 0.8674390937462185 0.7248526107868731 1.0 20.019963668923182 -3.972416217078431 15.632693528822545 0.8699656247200531 0.46817139820518267 0.06453033750683623 0.12925269977116194 11613492.806832045 182503017.63747725 0.032783061585295654 119158207.76956412 0.00010655744115851444 3.972416217078431 -0.40179422651487046 YSVEAS(ph)SPGHGS(ph)PLSSLLPSASVPESMTISELR ddPTM_KYSE-520_SHP099_60min_R1 1 YSVEASSPGHGSPLSSLLPSASVPESMTISELR 33 0 Q8TEQ0;Q8TEQ0-2;H3BQF0 Q8TEQ0 SNX29 Sorting nexin-29 2 YS(0.001)VEAS(0.502)S(0.502)PGHGS(0.937)PLS(0.028)S(0.031)LLPSASVPESMTISELR 92.73200000000001 0.0012819 58009000.0 12999.0 19047.0 18939.0 28804.0 13276.0 18856.0 16654.0 14261.0 21326.0 11607.0 True False 12277.919557135943 18131.953529870127 20159.838243471422 31541.523499761624 14320.745669892902 18738.312709721944 18337.548847376933 14211.53191954243 17453.735984711184 11504.171010109354 1.067258088074895 1.5761199580514382 1.7523938253139537 2.7417467518558563 1.244830736374526 1.6288277263312192 1.5939913298631174 1.2353373317428928 1.5171659017736798 1.0 13.489869406336636 -7.701707689362797 0.7237061721903656 1.042891244965275 1.7165449489727977 0.17814151272581646 0.4249057236388317 1.1330043122485813 1.3101315320475662 0.4249648530326143 0.17780869285249654 1.9874321484679485e-08 7.701707689362797 0.6736537040075228 YSVGSLS(ph)PVSASVLK ddPTM_KYSE-520_SHP099_60min_R1 2 YSVGSLSPVSASVLK 15 0 Q9UBU7 Q9UBU7 DBF4 Protein DBF4 homolog A 1 YSVGS(0.006)LS(0.993)PVS(0.001)ASVLK;YSVGSLS(1)PVSASVLK 241.33 8.883600000000001e-19 2201700000.0 2810300.0 3287300.0 2296400.0 2100010.0 2221200.0 2986400.0 2269700.0 2729300.0 3388500.0 3043700.0 True False 2654407.056805844 3129373.1736621056 2444429.6183699127 2299594.319008971 2395995.803100791 2967760.7698511663 2499143.4261373477 2719832.695323408 2773233.8171337293 3016735.185962768 0.8798939559418804 1.0373377113852935 0.8102897562053634 0.7622791452525434 0.7942347124963596 0.9837657556621193 0.8284265181001511 0.9015815203068261 0.9192831475689084 1.0 21.52455662919424 -8.140820821553826 1.1899903678550245 0.9998961648719487 0.8709973684380078 0.19247413916313882 0.08001976482208636 1.208144416190596 3.587912187644789 0.0812039483787508 0.025274844572786503 7.230680608781638e-09 8.140820821553826 -0.12889879643394087 YSVLNNDDYFADVS(ph)PLR ddPTM_KYSE-520_SHP099_60min_R1 9 YSVLNNDDYFADVSPLR 17 0 Q1ED39;H3BMC9 Q1ED39 KNOP1 Lysine-rich nucleolar protein 1 1 YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR;YSVLNNDDYFADVS(1)PLR 324.29 9.8943e-48 2949254000.0 1744951.0 1776026.0 1606658.0 1359603.0 1394551.0 1595116.0 1449785.0 1632513.0 1984792.0 1664242.0 True False 1648155.0895564226 1690703.0450906232 1710225.7454236904 1488819.2603404527 1504294.2297902072 1585160.2893657635 1596343.416338079 1626850.1934343996 1624403.8053346549 1649498.110640685 0.9991858001681851 1.0249802859331154 1.0368158256085653 0.9025892486546573 0.9119708716767921 0.960995516842434 0.9677752317752215 0.9862698131873041 0.984786702607205 1.0 20.653595694743917 -5.237082787654203 24.943936684717208 0.9570905611722146 1.0207926089847386 0.4556612793593191 0.03055560922695229 728.2163209446733 745775.5598955278 0.009025158848475432 0.01562324553349879 5.793182530002834e-06 5.237082787654203 0.06370204781252398 YTDHGSDHHYR ddPTM_KYSE-520_SHP099_60min_R1 1 YTDHGSDHHYR 11 0 G3V1T9;J3KPD3;Q9Y580 G3V1T9 RBM7 RNA-binding protein 7 0 88.681 0.0035445999999999997 94980000.0 71166.0 96647.0 189170.0 82646.0 63809.0 90116.0 53303.0 52904.0 73507.0 47819.0 False True 67218.28011409614 92003.93304989544 201364.20088270173 90500.65099157412 68830.40527645331 89553.55261716704 58691.38742714859 52720.488371886444 60159.98176067542 47395.360862619025 1.4182459821106996 1.941201235213285 4.248605711988971 1.9094833195573888 1.4522603905467935 1.8895003854227093 1.2383361231761145 1.1123554586851427 1.2693221586613959 1.0 15.532458232174312 -5.517877781676635 21.038993102043428 1.3857824885537209 2.5769530440462973 0.36653830690214995 0.7112137518001742 30.510413795436143 128358.24006705628 0.2158130409562318 0.28838865637684696 3.0347450962024972e-06 5.517877781676635 1.1911705554925764 YTGEEDGAGGHS(ph)PAPPQTEECLR ddPTM_KYSE-520_SHP099_60min_R1 2 YTGEEDGAGGHSPAPPQTEECLR 23 0 O94762;O94762-4;J3KS37;J3KSV9 O94762;J3KSV9 RECQL5 ATP-dependent DNA helicase Q5 1 YTGEEDGAGGHS(1)PAPPQTEECLR;YTGEEDGAGGHS(1)PAPPQTEECLR 146.34 4.3006000000000003e-07 890600000.0 422970.0 387657.0 354391.0 313945.0 336962.0 374455.0 318239.0 357216.0 456360.0 384810.0 True False 399507.0109302087 369033.3758349805 377235.61090564844 343782.2384089935 363478.99234848196 372117.8874479701 350409.70383333665 355976.9010708409 373496.5278994095 381400.8827776497 1.0474726959746306 0.9675734705892666 0.9890790187960066 0.901367180655984 0.9530103593398973 0.9756607922297563 0.9187438195774172 0.9333405273693859 0.9792754677947396 1.0 18.540948657304742 -3.830788443411546 1.2582662403695142 0.9500838883063473 1.2050863154440814 0.45039531157823764 0.029876955850046117 3.1860588362052087 2.0958054377798874 0.008510389109236557 1.3654513807213298 0.00014764255649572105 3.830788443411546 0.25500242713773413 YTIAALLSPYS(ph)YS(ph)TTAVVTNPKE ddPTM_KYSE-520_SHP099_60min_R1 1 YTIAALLSPYSYSTTAVVTNPKE 23 1 A0A087WT59;P02766 A0A087WT59 TTR Transthyretin 2 Y(0.001)T(0.001)IAALLS(0.025)PY(0.389)S(0.431)Y(0.214)S(0.235)T(0.235)T(0.235)AVVT(0.235)NPKE 42.172 0.057175 158510000.0 55933.0 78863.0 119270.0 10421.0 22306.0 53891.0 34891.0 23218.0 28242.0 64743.0 True False 52830.284990328844 75074.30310422367 126958.33503874743 11411.4087068121 24061.355296221063 53554.64627914856 38418.12278334507 23137.462177121946 23113.9647228835 64169.427389291835 0.8232936951397015 1.1699388035485503 1.9784863322612942 0.17783248458153392 0.37496602782895117 0.8345819568289525 0.598698232887084 0.360568312956194 0.3602021346187141 1.0 15.9695984890582 -5.277059796966496 24.999600334270642 0.5120567473711106 1.3085095950029966 0.5181471520313827 0.3506610667716841 620.1059467544957 992443.27444655 0.0994981387621249 0.14815285958207888 5.283724964236681e-06 5.277059796966496 0.796452847631886 YTPPTQPPIS(ph)PPYQEACTLKR ddPTM_KYSE-520_SHP099_60min_R1 2 YTPPTQPPISPPYQEACTLKR 21 1 B7Z4K4;Q9UET6-2;Q9UET6 B7Z4K4 FTSJ1 Putative tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase 1 YTPPTQPPIS(0.996)PPYQEACT(0.004)LKR;YTPPT(0.002)QPPIS(0.982)PPY(0.01)QEACT(0.006)LKR 83.236 0.0027759 322790000.0 326820.0 386890.0 332400.0 285338.0 277520.0 365750.0 268732.0 323870.0 444900.0 327790.0 True False 308690.6431004825 368303.2236662704 353827.03585880465 312456.4377300018 299359.2451271975 363467.2185819258 295898.05313157785 322746.5705618263 364117.3750163181 324886.03561676067 0.9501505428340958 1.133638209371132 1.089080468439041 0.9617416677723233 0.9214284774009958 1.1187529740757338 0.9107749201034379 0.993414721408777 1.1207541571464623 1.0 18.309574208933967 -5.252846936025505 24.8062325795472 1.0010404932717867 1.0652245874454953 0.08521079755062844 0.07922672153179189 1272.6270053834305 3674047.409113442 0.021284869511129317 0.036045588329149114 5.586670582399977e-06 5.252846936025505 0.06418409417370863 YTQVGPDHNR ddPTM_KYSE-520_SHP099_60min_R1 3 YTQVGPDHNR 10 0 Q08211 Q08211 DHX9 ATP-dependent RNA helicase A 0 ;; 113.69 0.0010595999999999997 1747700000.0 1952360.0 1739620.0 1155720.0 1078760.0 1542850.0 1554580.0 1174710.0 1246040.0 1212250.0 1274340.0 False True 1844058.6988668286 1656046.043977147 1230219.5604173816 1181285.0260589782 1664263.5173843203 1544877.2895778285 1293461.1508647855 1241717.778067921 992135.958335653 1263050.339021517 1.4600041201013554 1.3111480934798554 0.9740067536583147 0.9352636150465053 1.3176541472397865 1.2231320018287175 1.0240772761811123 0.983110284448265 0.7855078516540038 1.0 20.26848070837796 -1.0000000000822926 0.6678664646514949 1.027292599838447 47.49123584003795 0.4671206900281938 0.1474584239850389 242.16977850374246 1.458601746133717 0.06623829296681241 16699.94753608113 0.09999999998105143 1.0000000000822926 46.463943240199505 YTVQDESHSEWVSCVR ddPTM_KYSE-520_SHP099_60min_R1 2 YTVQDESHSEWVSCVR 16 0 P63244;H0Y8W2;J3KPE3;H0YAM7;H0YAF8;D6R9L0;D6R9Z1;D6RHH4;D6RFX4;D6RFZ9;D6RBD0 P63244 GNB2L1 Guanine nucleotide-binding protein subunit beta-2-like 1;Guanine nucleotide-binding protein subunit beta-2-like 1, N-terminally processed 0 ; 113.29 0.00034687 669441800.0 1186892.4 1139978.5 915516.4 1086280.0 1085220.7 1041875.5 1040450.1 1043785.6 1157793.1 973048.8 False True 1121053.1125606587 1085212.2217173858 974532.0520220329 1189519.72459801 1170621.3950288582 1035372.7685404064 1145628.9499224352 1040164.9513749911 947567.0586289195 964428.3446525108 1.1624016639251522 1.1252388295455937 1.0104763691626697 1.2333935757835912 1.213798206491577 1.0735611144998618 1.1878839483250692 1.0785300506174655 0.9825168078923826 1.0 19.879314526962368 -7.582900847399922 3.6453904992813215 0.9926083498756928 1.141365694139881 0.48721973604823876 0.062227691124191936 0.20909530410011243 5.524711595095276 0.04922893010952633 0.01678424097268569 2.612757797985865e-08 7.582900847399922 0.1487573442641883 YVAEIEKEKEENEK ddPTM_KYSE-520_SHP099_60min_R1 2 YVAEIEKEKEENEK 14 2 O14818;H0Y586;O14818-2 O14818 PSMA7 Proteasome subunit alpha type-7 0 ; 170.11 1.6186e-08 2567600000.0 2918510.0 2897070.0 2146880.0 1681690.0 2571430.0 2318960.0 1764040.0 1687180.0 2856100.0 1894750.0 False True 2756614.432394553 2757890.408609277 2285271.31992945 1841517.3119814629 2773786.911564679 2304486.510465464 1942366.3785713224 1681327.5663707736 2337504.2364219096 1877963.989093195 1.4678739573305815 1.4685534039132289 1.2168877215973293 0.9805924515467781 1.4770181577890886 1.2271196486457774 1.0342937297265349 0.8952927618077648 1.2447013095020054 1.0 20.84073796817594 -1.0000000000123956 0.24342083516271115 1.008111644889825 4.031251204845986 0.42984298349834227 0.15695375403411804 49.78678858861777 0.6691700975813746 0.2208389485929096 61.105610836084786 0.0999999999971458 1.0000000000123956 3.0231395599561606 YVASVLGLTPS(ph)PR ddPTM_KYSE-520_SHP099_60min_R1 1 YVASVLGLTPSPR 13 0 Q99666;O14715;F8W705;Q99666-2;C9J1W9;C9JF75 Q99666 RGPD5;RGPD8;RGPD6 RANBP2-like and GRIP domain-containing protein 5/6;RANBP2-like and GRIP domain-containing protein 8 1 YVASVLGLT(0.005)PS(0.995)PR 128.22 0.0005851 0.0 875910.0 904150.0 862860.0 462440.0 840070.0 876450.0 550890.0 617210.0 833890.0 678860.0 True False 827321.5262167043 860713.2768431811 918481.336224814 506390.1585623447 906178.7296555378 870979.750447379 606579.3373682885 615069.0425678963 682476.5966562321 672845.8285450875 1.229585576841048 1.2792132169479662 1.3650695259727934 0.7526094940015094 1.346785089854822 1.294471502232126 0.9015131128625874 0.9141307212944703 1.0143134841631842 1.0 19.35991644751356 -6.7667641384653265 24.99501309249667 0.9503335182872168 1.2066763940635348 0.35966328814097825 0.16572396508140433 154.68951309705457 726120.1036758194 0.06944397013186139 0.04836525254297748 1.7109442616802428e-07 6.7667641384653265 0.256342875776318 YVASYLLAALGGNS(ph)SPSAK ddPTM_KYSE-520_SHP099_60min_R1 2 YVASYLLAALGGNSSPSAK 19 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 1 YVASYLLAALGGNS(0.485)S(0.485)PS(0.03)AK;YVASYLLAALGGNS(0.499)S(0.499)PS(0.003)AK 93.152 0.00052019 128580000.0 71055.0 107431.0 103967.0 83126.0 85194.0 125761.0 66253.0 93113.0 118980.0 53315.0 True False 67113.43750536918 102269.85350278148 110668.87917308166 91026.27004725668 91898.28311244777 124976.07895032562 72950.49980696909 92790.01273573756 97376.23124172077 52842.67057844231 1.2700614251836992 1.9353649689405266 2.094308973442196 1.7225902675023346 1.7390923302415109 2.365059857540789 1.3805225778412866 1.7559675111044097 1.8427575702702348 1.0 15.689415759323358 -10.274559804867138 8.252416349646488 0.9999991716651235 1.8032377333180594 0.3845391760395509 0.2991996304495582 4.448979716761455e-06 3.9146062142158944e-07 0.2826527944891421 0.06855330069006425 5.314228144663161e-11 10.274559804867138 0.8032385616529358 YVASYLLAALGGNSS(ph)PSAK ddPTM_KYSE-520_SHP099_60min_R1 6 YVASYLLAALGGNSSPSAK 19 0 P05387 P05387 RPLP2 60S acidic ribosomal protein P2 1 YVASYLLAALGGNS(0.08)S(0.92)PSAK;YVASYLLAALGGNS(0.152)S(0.832)PS(0.016)AK;YVASYLLAALGGNS(0.401)S(0.599)PSAK;YVASYLLAALGGNS(0.032)S(0.968)PSAK;YVASYLLAALGGNS(0.052)S(0.946)PS(0.002)AK;YVASYLLAALGGNS(0.082)S(0.918)PSAK 330.64 1.3372999999999997e-64 2296725000.0 782061.0 1253398.0 1352756.0 915654.0 1030954.0 1521172.0 744251.0 1003620.0 1296689.0 543199.0 True False 738678.5173300472 1193182.8786912446 1439956.8162461272 1002677.480858587 1112084.2144741446 1511677.801297898 819487.1542697933 1000138.676466669 1061242.964469623 538386.6794624268 1.3720222760110068 2.216219167759917 2.674577345940112 1.8623742360411841 2.0655864212401176 2.8077919810484384 1.5221163255525605 1.8576586580212133 1.9711538285628882 1.0 19.03828319027057 -8.658245402017435 0.6237136471371677 0.9676562066901839 2.133415324479254 0.3604768426440651 0.4215789011945236 2.528621675751357 1.5042373471080779 0.6379964770880433 0.17400595643631486 2.1966183030364573e-09 8.658245402017435 1.16575911778907 YVCSDKISTGMMMK ddPTM_KYSE-520_SHP099_60min_R1 1 YVCSDKISTGMMMK 14 1 O75445;O75445-3 O75445 USH2A Usherin 0 77.288 0.0162 297970000.0 489510.0 759610.0 455290.0 409980.0 436360.0 669180.0 477420.0 644520.0 678810.0 692260.0 False True 462355.9044860075 723117.1954021443 484638.7218897568 448944.37593501795 470699.04945122544 665003.3994002821 525682.2727701864 642284.3105520986 555555.2154075677 686127.1149701303 0.6738633328987962 1.053911410327552 0.7063395562072415 0.6543166217160244 0.6860230986086547 0.9692131164780337 0.7661587208852275 0.9361010467864394 0.8096972168659347 1.0 19.388116355715844 -6.259162698652417 24.98909849831352 0.8841106280344834 0.7632183158316616 0.23809007593033327 0.12504657748328546 372.89299788143273 4092924.019843689 0.0430606927843519 0.04108123904624669 5.506013873466227e-07 6.259162698652417 -0.12089231220282182 YVDEASKK ddPTM_KYSE-520_SHP099_60min_R1 2 YVDEASKK 8 1 M0R210;P62249 M0R210 RPS16 40S ribosomal protein S16 0 ; 122.13 0.0022517 2738800000.0 3158200.0 3403000.0 1837540.0 1695830.0 2645810.0 2812300.0 2164510.0 2380160.0 2394850.0 2595250.0 False True 2983008.3502843827 3239514.7719928604 1955990.7685679507 1857001.1733301198 2854020.1944003697 2794747.3925302806 2383319.7943818783 2371903.780493523 1960005.609255629 2572258.1040739496 1.1596846932117293 1.259405021161021 0.7604177689128657 0.7219342298461403 1.1095388094531278 1.0864957090052323 0.9265476861000729 0.9221095568663561 0.7619785923315263 1.0 21.294603981346587 -4.748431693665481 24.997365413100965 0.9154890327494987 1.2095450004690533 0.4642468433615463 0.12816201781232572 217.69790649100543 418351.0029203203 0.035205265848365426 0.09190041648674553 1.7847126681236004e-05 4.748431693665481 0.29405596771955467 YVDEENS(ph)DGETSNHR ddPTM_KYSE-520_SHP099_60min_R1 2 YVDEENSDGETSNHR 15 0 A0A494C108;Q8N9T8;H0YFD2;F8WFC1;H0YH26 A0A494C108 KRI1 Protein KRI1 homolog 1 YVDEENS(1)DGETSNHR;YVDEENS(1)DGETSNHR 133.16 1.5094000000000002e-05 67804000.0 60921.0 110622.0 156941.0 185015.0 64530.0 84406.0 61316.0 51187.0 76869.0 83198.0 True False 57541.59068699733 105307.55307299267 167057.66797447848 202598.76997321186 69608.1438745246 83879.19084518409 67514.41966649248 51009.44424413564 62911.527309798585 82460.93044706447 0.6978042859210274 1.2770599664843039 2.0259008365388333 2.4569061842355695 0.8441348344863671 1.0171991801502902 0.8187443350500774 0.6185892393838678 0.7629252661681333 1.0 16.33142311950199 -5.929712595365381 24.999991402098313 0.8306027664550969 1.623569210641642 0.4226158959596614 0.4412045848894555 49.551274509117405 17623.541845348827 0.14865122586631102 0.1685546408479848 1.175675328482828e-06 5.929712595365381 0.792966444186545 YVDS(ph)EGHLYTVPIR ddPTM_KYSE-520_SHP099_60min_R1 3 YVDSEGHLYTVPIR 14 0 Q03135 Q03135 CAV1 Caveolin-1 1 YVDS(1)EGHLYTVPIR;YVDS(1)EGHLYTVPIR;YVDS(1)EGHLYTVPIR 169.02 1.7538e-08 1429220000.0 1108090.0 1208600.0 956590.0 1072940.0 1094770.0 1170590.0 1082380.0 1140960.0 1452140.0 1095690.0 True False 1046622.0387773487 1150537.0418544153 1018253.3219981149 1174911.8950088266 1180922.1706107755 1163283.9136016858 1191797.5334108225 1137002.2760620671 1188467.9814704366 1085983.0390339203 0.9637554189689862 1.0594429199169828 0.9376328040113251 1.081887886622996 1.087422296817188 1.0711805541977264 1.09743659944361 1.0469797733429917 1.0943706657957437 1.0 20.05057014052102 -5.285707054822501 24.954514751683337 1.0725355288177325 0.9941936295756398 0.4656044912432533 0.03962996150251375 612.0789866553829 629401.3435883038 0.010306132563596953 0.01529520572246782 5.179560916874691e-06 5.285707054822501 -0.07834189924209267 YVDSEGHLY(ph)TVPIR ddPTM_KYSE-520_SHP099_60min_R1 1 YVDSEGHLYTVPIR 14 0 Q03135 Q03135 CAV1 Caveolin-1 1 YVDSEGHLY(0.953)T(0.047)VPIR 169.65 1.5074000000000002e-06 514270000.0 389980.0 635940.0 457100.0 667650.0 435730.0 398530.0 391030.0 582240.0 620430.0 421910.0 True False 368347.0319941437 605388.4878345989 486565.39738585864 731103.2552637081 470019.4720354343 396042.6264428023 430559.12848503684 580220.3453358377 507775.55176753143 418172.2056410131 0.8808501067867656 1.447701400686359 1.1635526962869427 1.7483305810413805 1.1239854435445915 0.9470802246067777 1.0296215833499405 1.3875153286345805 1.2142737965790098 1.0 18.673737648950496 YVEQYVGTEGASSS(ph)PTEGFLLKPVFLQR ddPTM_KYSE-520_SHP099_60min_R1 1 YVEQYVGTEGASSSPTEGFLLKPVFLQR 28 1 M0QYC5;O75182-2;O75182 M0QYC5 SIN3B Paired amphipathic helix protein Sin3b 1 YVEQYVGTEGASS(0.121)S(0.876)PT(0.002)EGFLLKPVFLQR 176.84 1.0459e-10 250130000.0 270300.0 328410.0 268430.0 236980.0 241710.0 289950.0 227280.0 259770.0 375800.0 238870.0 True False 255305.92017030908 312632.69064654014 285733.42730318545 259502.50794936507 260731.20185822633 288140.3144985085 250255.68043904327 258868.9185007737 307564.1931470726 236753.7976380479 1.0783604010467613 1.3204970469977289 1.2068800169364895 1.0960859362691013 1.1012756900180134 1.2170462200527021 1.057029213198249 1.0934097830039273 1.299088742041133 1.0 17.853028041797366 -11.375240105588743 2.1080212105288267 2.374596054302111e-05 1.1618012679989784 0.2312486256696168 0.08928332971470299 1210558.958782836 187809.74066333164 5767413.969293475 0.023862757174328 4.214634272385356e-12 11.375240105588743 1.1617775220384354 YVGFGNT(ph)PPPQK ddPTM_KYSE-520_SHP099_60min_R1 2 YVGFGNTPPPQK 12 0 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;F8W1U7;E5RHT6;E5RHC5;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 YVGFGNT(1)PPPQK;YVGFGNT(1)PPPQK 128.54 0.00037032 1486910000.0 3675970.0 3846410.0 2653220.0 2421040.0 2696670.0 3971890.0 3078060.0 4175050.0 4337240.0 4477530.0 True False 3472056.616235484 3661622.6900208807 2824250.8065021 2651134.9136877814 2908882.587046558 3947099.9612122104 3389220.3437706903 4160567.7260140004 3549706.548922855 4437862.567665623 0.7823713698420891 0.8250869949645477 0.636398888753262 0.5973900438026217 0.6554692811446549 0.8894146452327928 0.763705565932716 0.9375161268688221 0.7998685166111509 1.0 22.08143355997372 -6.265411296783121 24.99177771775451 0.8670460219058213 0.6971680904076467 0.5060844614239027 0.08794624185345593 327.4845523056571 2060564.9423902621 0.031855986032729065 0.029130873560890985 5.427360920676289e-07 6.265411296783121 -0.16987793149817454 YVGFGNT(ph)PPPQKK ddPTM_KYSE-520_SHP099_60min_R1 2 YVGFGNTPPPQKK 13 1 F8VWH9;Q8N6T3-5;Q8N6T3;Q8N6T3-2;Q8N6T3-4;F8W1U7;E5RHT6;E5RHC5;Q8N6T3-3 F8VWH9 ARFGAP1 ADP-ribosylation factor GTPase-activating protein 1 1 YVGFGNT(1)PPPQKK;YVGFGNT(1)PPPQKK 97.417 0.0031517 3133400000.0 4567900.0 4358600.0 4105200.0 3397200.0 3870600.0 4443300.0 4133400.0 4270700.0 5783700.0 4231500.0 True False 4314509.481117105 4149206.313608018 4369827.760552234 3720068.8665945777 4175194.199298539 4415567.716541547 4551244.410096548 4255885.938488878 4733525.875212143 4194012.2020571884 1.0287307888615136 0.9893167005028758 1.0419206120594515 0.8869952416375568 0.9955131263687266 1.0528266261065442 1.0851767211988879 1.0147528746819907 1.128639032783529 1.0 21.99989962814108 -6.252823991203195 4.941836184234617 1.0594748601374675 0.9853666123877717 0.3078748653379664 0.05080062162845494 0.2254398961398947 16.765479195765785 0.017250259435416897 0.01633329115597191 5.586965747444394e-07 6.252823991203195 -0.07410824774969582 YVIYIER ddPTM_KYSE-520_SHP099_60min_R1 1 YVIYIER 7 0 P61254;J3QRI7;J3QQQ9;J3QQV1;E5RIT6;J3QRC4;Q9UNX3;J3KS10 P61254 RPL26;RPL26L1 60S ribosomal protein L26;60S ribosomal protein L26-like 1 0 105.12 0.030481 81057000.0 83678.0 85898.0 64355.0 68726.0 92511.0 86745.0 71772.0 69442.0 77030.0 78702.0 False True 79036.21453204259 81771.3311444734 68503.4262716406 75257.69837677463 99791.08938441273 86203.59227857603 79027.4141872186 69201.12190988462 63043.29376827832 78004.76150922943 1.0132229495079108 1.0482864066547823 0.8781954453323385 0.9647833916891115 1.279294846284551 1.105106798748132 1.0131101314612465 0.8871397152043959 0.8081980195634483 1.0 16.25127457014087 -2.4052030459877227 1.6204113040530335 1.0030237524212866 8.032182469181723 0.0003249046139406353 0.12541193127099282 12583.563774633249 109.01477675726368 0.03826269371681359 326462.5283295727 0.003933661217328307 2.4052030459877227 7.029158716760437 YVKHLQIHERT(ph)EK ddPTM_KYSE-520_SHP099_60min_R1 1 YVKHLQIHERTEK 13 2 K7EQV7;A0A087WVH9;Q9H0M5 K7EQV7 ZNF700 Zinc finger protein 700 1 Y(0.001)VKHLQIHERT(0.999)EK 50.675 0.064708 2460300000.0 1724500.0 1156700.0 1787500.0 796740.0 1983600.0 1813800.0 1034100.0 1225200.0 1308600.0 1101000.0 True False 1628838.5472944789 1101130.3957579029 1902725.1101011198 872461.9300513851 2139698.0348598617 1802479.4014050507 1138636.9198434304 1220950.0671638288 1070991.227121498 1091245.9965650386 1.492641029082025 1.0090579019066075 1.7436261998581517 0.7995098564372017 1.960784315905928 1.6517626704508348 1.043428267711924 1.1188586908974376 0.9814388602503035 1.0 20.05754493039872 -6.784248288315263 24.451702138318414 1.0458360070099428 1.4311419780552777 0.27993145713217193 0.3192684204682351 268.5316147762043 287868.9461616306 0.13221074909352726 0.08921264419681121 1.6434318963999348e-07 6.784248288315263 0.3853059710453348 YVLGQLVGLNS(ph)PNSILK ddPTM_KYSE-520_SHP099_60min_R1 2 YVLGQLVGLNSPNSILK 17 0 P33981-2;P33981 P33981-2 TTK Dual specificity protein kinase TTK 1 YVLGQLVGLNS(1)PNSILK;YVLGQLVGLNS(1)PNSILK 242.26 6.9447e-21 35269000.0 124746.0 177238.0 135472.0 110695.0 127800.0 173636.0 94145.0 132502.0 176097.0 106985.0 True False 117826.09070501408 168723.22044033822 144204.74188286386 121215.4195183347 137857.13291746867 172552.2733169963 103662.09536665665 132042.38148819917 144122.2238441193 106037.19613307042 1.1111769737588053 1.5911701421131557 1.3599448791714128 1.1431405576418345 1.300082781748266 1.6272806110457068 0.9776012488727714 1.24524587883759 1.3591666801831916 1.0 16.694210902089633 -13.355898599575323 0.1862132822190685 2.844922573939779e-17 1.3686054728128 0.18090579136625828 0.191571472903814 175.52017463717604 2.120787008808819 65.54615308446 0.5586706064501229 4.406577376337921e-14 13.355898599575323 1.3686054728128 YVLGYK ddPTM_KYSE-520_SHP099_60min_R1 1 YVLGYK 6 0 E5RI99;P62888;E5RJH3;A0A0C4DH44 E5RI99 RPL30 60S ribosomal protein L30 0 118.11 0.062922 481160000.0 1605000.0 1667200.0 1138300.0 954960.0 1369500.0 1260400.0 1050500.0 1087700.0 1090800.0 1178000.0 False True 1515967.4505118213 1587105.209481783 1211676.6393443963 1045719.1112808075 1477271.8586109024 1252533.3760783593 1156694.7918920075 1083927.0225710894 892738.2168302999 1167563.8364701313 1.2984021970867226 1.3593305649822467 1.0377819194945521 0.8956419157707949 1.2652600332989965 1.0727750697256215 0.9906908348489244 0.9283663888118536 0.7646161939455873 1.0 20.15507000066481 -1.0000000000047622 0.2768925206322706 0.9028748684285073 4.32422009272673 0.5012370933121195 0.1281382460498291 44.56727149508986 0.6266583422380326 0.1526425808637057 73.50329021531704 0.09999999999890347 1.0000000000047622 3.4213452242982223 YVLSEESKS(ph)PTR ddPTM_KYSE-520_SHP099_60min_R1 2 YVLSEESKSPTR 12 1 E7EV07 E7EV07 ARHGEF4 1 YVLSEES(0.033)KS(0.809)PT(0.158)R;YVLSEES(0.016)KS(0.945)PT(0.039)R 123.68 6.9782e-05 1201230000.0 801730.0 758620.0 638610.0 710860.0 722080.0 730120.0 750380.0 824850.0 1033830.0 782770.0 True False 757256.4386908676 722174.7564881644 679775.8224121269 778419.9206721471 778903.5879268055 725563.0502557369 826235.733403069 821988.7878714378 846112.532733469 775835.266785845 0.9760531276543455 0.930835175204155 0.8761857723074691 1.0033314467606118 1.0039548616469474 0.9352024602614709 1.0649628455613065 1.0594888155533313 1.0905827164041806 1.0 19.565390831719686 -6.544144565856974 1.0504630312308574 1.062502735924255 0.9420054911758206 0.49843865251934605 0.04508361319146089 0.4194562444178007 0.9486966639019769 0.029383603893189617 0.020346352918134598 2.856639480689178e-07 6.544144565856974 -0.12049724474843437 YVPNSTDSPGPSQISNAAVQTT(ph)PPHLKPATEK ddPTM_KYSE-520_SHP099_60min_R1 1 YVPNSTDSPGPSQISNAAVQTTPPHLKPATEK 32 1 Q03164-2;Q03164;Q03164-3 Q03164-2 KMT2A Histone-lysine N-methyltransferase 2A;MLL cleavage product N320;MLL cleavage product C180 1 YVPNSTDSPGPSQISNAAVQT(0.038)T(0.962)PPHLKPATEK 176.88 3.1285e-10 1038200000.0 846800.0 1144900.0 838180.0 863900.0 783120.0 989650.0 838210.0 1031100.0 1236900.0 1050500.0 True False 799826.3159460516 1089897.2854700654 892210.4239354164 946004.796258995 844747.0886567141 983473.227257971 922944.4469412646 1027523.3547605487 1012310.139711585 1041193.3872766341 0.7681822855580106 1.0467769953099897 0.8569113431166707 0.9085774149347834 0.8113258295524246 0.9445634588886151 0.8864294166863047 0.9868708035575975 0.9722594784811334 1.0 19.9898066235074 -7.2634175388909314 24.563417766128765 0.9846738652365818 0.8937098164188896 0.2809148812529939 0.07112098734290606 190.65616874575707 2367387.1817256063 0.034452108115612154 0.017892100229975953 5.4523341135749865e-08 7.2634175388909314 -0.09096404881769227 YVQHTYR ddPTM_KYSE-520_SHP099_60min_R1 2 YVQHTYR 7 0 P52566;H0YGX7;F5H3P3 P52566 ARHGDIB Rho GDP-dissociation inhibitor 2 0 ; 133.55 0.0010284 376340000.0 598760.0 614200.0 632540.0 415040.0 628150.0 636700.0 461640.0 446690.0 460400.0 438660.0 False True 565545.589201532 584692.9100670049 673314.5404997842 454485.27681367367 677581.831315398 632726.1191281265 508307.0763722279 445140.53664822975 376802.9657395214 434773.8136723163 1.3007811680851982 1.3448208969358046 1.5486547701956426 1.045337282332771 1.5584697376141496 1.4552995125989912 1.1691299254635716 1.0238439451731256 0.866664352567271 1.0 18.72990552422528 -7.0993691066290285 2.488445350625804 0.9480181663422942 1.37403351997998 0.6277824944197483 0.14224387335255778 0.1932078708082034 2.317544554566281 0.08066492153754208 0.041058190673351244 7.954829825088575e-08 7.0993691066290285 0.42601535363768583 YVSGS(ph)S(ph)PDLVTR ddPTM_KYSE-520_SHP099_60min_R1 1 YVSGSSPDLVTR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 2 Y(0.003)VS(0.033)GS(0.986)S(0.978)PDLVTR 98.94200000000001 0.0011183 0.0 426850.0 414780.0 351660.0 344530.0 432840.0 381250.0 339500.0 352680.0 448130.0 366150.0 True False 403171.7795956209 394853.3462025273 374328.56627589394 377274.02761327813 466902.0454772852 378870.4773324929 373819.97320070036 351456.635396131 366760.88843799196 362906.19586038985 1.1109531449022745 1.0880314271471616 1.0314747186622801 1.0395910345890473 1.2865639958842219 1.043990104479353 1.0300732736580476 0.9684503582609996 1.010621732617332 1.0 18.4692371624493 -6.514130158276644 24.58404349731042 1.0049963815537206 1.1079747074865443 0.37276939392346264 0.06697043019050714 412.7953971127976 1159986.5360098453 0.025951076940149115 0.0211911788812195 3.061045899195206e-07 6.514130158276644 0.10297832593282363 YVSGS(ph)SPDLVTR ddPTM_KYSE-520_SHP099_60min_R1 8 YVSGSSPDLVTR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 YVS(0.128)GS(0.844)S(0.028)PDLVTR;YVS(0.103)GS(0.735)S(0.161)PDLVTR;YVSGS(0.835)S(0.164)PDLVTR;YVS(0.001)GS(0.962)S(0.037)PDLVTR;YVSGS(0.5)S(0.5)PDLVTR;YVSGS(0.795)S(0.205)PDLVTR;YVS(0.006)GS(0.955)S(0.039)PDLVTR;YVSGS(0.95)S(0.05)PDLVTR 273.5 6.034099999999999e-22 10182090000.0 8051520.0 8412160.0 7716560.0 7604450.0 8157930.0 7960420.0 7688320.0 8064590.0 9082010.0 8217000.0 True False 7604886.1352928 8008027.206690407 8213981.804532533 8327174.641638744 8799912.67872773 7910736.066012123 8465530.416372335 8036615.819579464 7432945.922840978 8144203.772729262 0.9337789607816103 0.9832793272566632 1.008567815068297 1.0224663913152758 1.0805123403461612 0.9713332680232164 1.0394546419281685 0.9867896290230294 0.9126669874997578 1.0 22.957342228260885 -10.066629013730765 18.853627031562844 0.9999999999982547 0.9973221028438497 0.0 0.0465212202064047 0.0 0.0 0.04614589014764961 0.01119202230981816 8.577702632674964e-11 10.066629013730765 -0.002677897154405029 YVSGSS(ph)PDLVTR ddPTM_KYSE-520_SHP099_60min_R1 7 YVSGSSPDLVTR 12 0 Q15678 Q15678 PTPN14 Tyrosine-protein phosphatase non-receptor type 14 1 YVS(0.001)GS(0.206)S(0.792)PDLVTR;YVSGS(0.059)S(0.941)PDLVTR;YVSGS(0.075)S(0.925)PDLVTR;YVSGS(0.003)S(0.997)PDLVTR;YVSGS(0.018)S(0.982)PDLVTR;YVSGS(0.004)S(0.996)PDLVTR;YVSGS(0.002)S(0.998)PDLVTR 344.84 6.667e-51 5288500000.0 4743150.0 4298540.0 3833220.0 3484660.0 3600180.0 3831030.0 3609980.0 4038280.0 5129470.0 3816740.0 True False 4480038.0142648965 4092031.6861599176 4080315.494568851 3815841.0386987654 3883493.6837778664 3807119.1207215805 3974912.008409618 4024272.1492216405 4198087.551415947 3782926.6529787867 1.1842783181474543 1.0817105541651812 1.078613430518377 1.0087007729039792 1.0265844516757654 1.006395172299665 1.050750483168807 1.0637986190011934 1.1097459550557902 1.0 21.851071373623277 -4.096179786941982 1.349588070562785 1.0407066194830832 1.2888667122558877 0.6429798523890788 0.032203631648315266 1.2607106156222911 1.5443573522890544 0.009795657242298032 0.47393220467774555 8.013462576101614e-05 4.096179786941982 0.24816009277280449 YVSQNCVTS(ph)PMNIDR ddPTM_KYSE-520_SHP099_60min_R1 2 YVSQNCVTSPMNIDR 15 0 A0A0C4DGF8;A0A1B0GV09;Q9H9B1-3;Q9H9B1;A0A1B0GWF6 A0A0C4DGF8 EHMT1 Histone-lysine N-methyltransferase EHMT1 1 YVSQNCVT(0.054)S(0.946)PMNIDR;YVSQNCVT(0.292)S(0.708)PMNIDR 268.17 3.664e-25 1418090000.0 1277890.0 1429570.0 1207880.0 941200.0 1101240.0 1316090.0 1112060.0 1253060.0 1599560.0 1305720.0 True False 1207002.8942894402 1360891.311371683 1285741.8774763315 1030651.3650179012 1187901.32280151 1307875.7941312022 1224477.8774597093 1248713.4273264017 1309120.2256262132 1294152.3366347875 0.9326590542099829 1.0515696435787754 0.9935011830366695 0.7963910706972306 0.917899144617268 1.0106042056316957 0.946162088339419 0.9648890567036786 1.0115657860112104 1.0 20.303576018472217 -7.650875476262656 3.875028045058344 1.0059182316407516 0.9508497984600854 0.10566072624952527 0.06397731650544512 0.5987287924679232 16.074759377914575 0.05496669107280688 0.017972411558286796 2.2342127390015483e-08 7.650875476262656 -0.05506843318066612 YVTKPNS(ph)DDEDDGDEKEDDEEDKDDVPGPSTGGSLR ddPTM_KYSE-520_SHP099_60min_R1 4 YVTKPNSDDEDDGDEKEDDEEDKDDVPGPSTGGSLR 36 3 G5E9A6;P51784 G5E9A6 USP11 Ubiquitin carboxyl-terminal hydrolase;Ubiquitin carboxyl-terminal hydrolase 11 1 Y(0.001)VT(0.038)KPNS(0.961)DDEDDGDEKEDDEEDKDDVPGPSTGGSLR;YVT(0.049)KPNS(0.951)DDEDDGDEKEDDEEDKDDVPGPSTGGSLR;YVT(0.055)KPNS(0.945)DDEDDGDEKEDDEEDKDDVPGPSTGGSLR;YVT(0.012)KPNS(0.988)DDEDDGDEKEDDEEDKDDVPGPSTGGSLR 196.34 1.6759e-15 3703640000.0 793320.0 763192.0 616178.0 752054.0 641732.0 747988.0 724126.0 744820.0 805924.0 611777.0 True False 749312.9581557872 726527.110745454 655897.819799658 823528.98604672 692232.6574443891 743319.529439939 797327.7228687197 742236.3932622944 659588.5172907428 606357.1317353039 1.2357617630576307 1.1981835006479455 1.0817021611052484 1.3581583244348137 1.1416253247707704 1.2258774417523037 1.3149473818950335 1.2240911410378306 1.087788833955162 1.0 19.209808235830007 -7.920845023327539 3.246664737417677 1.0022040332025977 1.222218774437366 0.5014462823441916 0.07372189896131011 0.17862566864351062 3.7792068352385035 0.06977233664103424 0.018667562316703232 1.1999274172292112e-08 7.920845023327539 0.22001474123476839 YVVLCRGAK ddPTM_KYSE-520_SHP099_60min_R1 1 YVVLCRGAK 9 1 O75426-2;O75426-4;O75426;O75426-3 O75426-2 FBXO24 F-box only protein 24 0 60.43600000000001 0.034871 156230000.0 348910.0 350700.0 246860.0 196230.0 298170.0 332030.0 202400.0 260590.0 304200.0 231770.0 False True 329555.2667651589 333851.84558856796 262772.99058996496 214879.64020129913 321634.28264476964 329957.67760972475 222860.56723364317 259686.0741121632 248964.94825795467 229716.69811433138 1.4346160704483801 1.4533198863167007 1.1439002595239345 0.9354114958345442 1.400134536518065 1.4363678405542066 0.9701539725367467 1.1304623314014197 1.0837912537557166 1.0 17.80949620451423 -1.0000000000000002 0.22428168994092904 1.042405844249552 3.1720930334438755 0.3237001736229098 0.16436150655977233 70.5369411329299 0.9106858877585691 0.272026526852271 54.72588064633216 0.09999999999999995 1.0000000000000002 2.1296871891943234 YWDGWFR ddPTM_KYSE-520_SHP099_60min_R1 2 YWDGWFR 7 0 Q9Y570;Q9Y570-4;Q9Y570-2;Q9Y570-3 Q9Y570 PPME1 Protein phosphatase methylesterase 1 0 ; 102.8 0.034475 1914950000.0 1949530.0 1733820.0 1316770.0 1151290.0 2033900.0 1753050.0 1420560.0 1201530.0 1311750.0 1334990.0 False True 1841385.6846082965 1650524.6846831213 1401651.1011064935 1260708.2554520385 2193956.358692015 1742108.5646891217 1564164.068129564 1197362.1728692094 1073569.2665265347 1323163.027206503 1.3916544271161195 1.2474084075397367 1.0593185210636489 0.9527988838334451 1.658114921276144 1.316624277483862 1.1821400960937283 0.9049241463443187 0.8113658290415525 1.0 20.335559396664365 -7.200464437231178 3.525313087545361 0.8878429194697404 1.2622885317223915 0.4447344673061945 0.18239719852626066 0.241850548159238 5.984676720808776 0.10532609327035916 0.05427523697290637 6.302829554177969e-08 7.200464437231178 0.37444561225265116 YWGPAS(ph)PTHK ddPTM_KYSE-520_SHP099_60min_R1 12 YWGPASPTHK 10 0 A0A3B3ISQ4;Q9H6S3;Q9H6S3-3;Q9H6S3-2 A0A3B3ISQ4 EPS8L2 Epidermal growth factor receptor kinase substrate 8-like protein 2 1 YWGPAS(0.591)PT(0.409)HK;YWGPAS(0.78)PT(0.22)HK;YWGPAS(0.841)PT(0.159)HK;YWGPAS(0.996)PT(0.004)HK;YWGPAS(0.922)PT(0.078)HK;YWGPAS(0.991)PT(0.009)HK;YWGPAS(0.977)PT(0.023)HK;YWGPAS(0.964)PT(0.036)HK;YWGPAS(0.982)PT(0.018)HK;YWGPAS(0.971)PT(0.029)HK;YWGPAS(0.5)PT(0.5)HK;YWGPAS(0.796)PT(0.204)HK 151.26 0.00014689 46467860000.0 28340920.0 26660910.0 23400000.0 26467500.0 29640120.0 32101030.0 32694470.0 35231590.0 38043440.0 33936970.0 True False 26768792.67137662 25380079.864758253 24908401.44132376 28982963.242255963 31972628.814786535 31900675.564497534 35999546.09487813 35109379.837404914 31135710.293078933 33636314.84836317 0.7958301256262399 0.7545440093296462 0.7405211169420324 0.8616569137527368 0.9505389921257206 0.9483998383387087 1.07025832815422 1.0437938875195607 0.9256575945802243 1.0 25.00351631863878 -5.697057282145934 1.5769001843922659 1.0059553808321011 0.7594349762311565 0.8580941790692044 0.04182946555000268 0.13268945593063616 0.6830296448012015 0.015516193040246165 0.022282065213188082 2.0088278367383856e-06 5.697057282145934 -0.2465204046009446 YWLEEAECR ddPTM_KYSE-520_SHP099_60min_R1 2 YWLEEAECR 9 0 P55884;P55884-2;C9JZG1;C9JQN7 P55884 EIF3B Eukaryotic translation initiation factor 3 subunit B 0 ; 184.49 4.9392e-05 690370000.0 392660.0 313660.0 184834.0 235640.0 346590.0 330430.0 309560.0 240610.0 262950.0 253470.0 False True 370878.3670516965 298591.3027867415 196748.6953848565 258035.15475225062 373864.6611726559 328367.6638032152 340853.34581445943 239775.38006879593 215204.90843007618 251224.45299667623 1.4762829120643097 1.1885439463597596 0.7831590159237386 1.0271100272060876 1.4881698684705753 1.3070688775967185 1.3567681877646243 0.9544269166822237 0.8566240501792372 1.0 17.93861737059341 -7.357734408938192 6.695551459945075 0.9232530682486783 1.21789060015319 0.31028211172440223 0.20101330575898316 0.3611938151272494 21.35933188075742 0.12329826809258852 0.058396161536077296 4.387989614971936e-08 7.357734408938192 0.2946375319045117 YWSQQIEESTTVVTTQSAEVGAAETTLTELRR ddPTM_KYSE-520_SHP099_60min_R1 3 YWSQQIEESTTVVTTQSAEVGAAETTLTELRR 32 1 P05783;F8VZY9 P05783 KRT18 Keratin, type I cytoskeletal 18 0 ;; 136.0 5.9791999999999994e-06 155725000.0 91000.0 92295.0 81593.0 117792.0 73933.0 75014.3 74969.0 94360.0 84468.0 56167.6 False True 85952.04859599732 87861.0096623807 86852.6153334158 128986.91626454385 79751.10647877312 74546.10792855833 82547.59814693168 94032.68718378952 69130.74046499969 55669.998761731535 1.543956359041311 1.5782470202384447 1.5601332363082376 2.316991541828658 1.4325688567033943 1.3390714853006704 1.4828022271068604 1.68910884274043 1.2417952578170577 1.0 15.764612430663313 -5.960791635085819 24.997800958297933 1.4001032502189645 1.7428704027510427 0.33052931958520226 0.2662532385461691 213.31864962058899 136003.17418994178 0.08294878930772076 0.09405495912240958 1.0944813483370854e-06 5.960791635085819 0.3427671525320781 YWVPVEYEEEEKKEDKEEK ddPTM_KYSE-520_SHP099_60min_R1 2 YWVPVEYEEEEKKEDKEEK 19 3 Q13045-2;Q13045-3;Q13045 Q13045-2 FLII Protein flightless-1 homolog 0 ; 159.06 7.1816e-09 1495550000.0 765310.0 769920.0 644560.0 555830.0 711060.0 717450.0 615030.0 602020.0 761310.0 607560.0 False True 722856.7286923387 732931.8875265185 686109.3689324632 608655.9160836175 767016.3766220284 712972.1284254349 677203.2345143643 599931.7331325236 623075.2950633254 602177.4910745268 1.2004047633903945 1.217135974675296 1.1393806296349074 1.010758331397493 1.2737380390179691 1.1839900012755473 1.124590747000459 0.9962706046385164 1.0347037282172546 1.0 19.19982925669059 -7.132263251965 3.5325423339952695 1.0112702886222171 1.1683470459503216 0.5521475416633989 0.06450546842956631 0.20410683958911965 4.60945341369749 0.03519268840983909 0.019033426827475174 7.374570776005326e-08 7.132263251965 0.15707675732810444 YYDDIYFDS(ph)DS(ph)EDEDR ddPTM_KYSE-520_SHP099_60min_R1 2 YYDDIYFDSDSEDEDR 16 0 G3V2W9;A0A087X060;Q56P03 G3V2W9 EAPP E2F-associated phosphoprotein 2 YYDDIYFDS(1)DS(1)EDEDR;YYDDIY(0.002)FDS(0.998)DS(1)EDEDR 106.94 0.00050467 263980000.0 686930.0 695580.0 652680.0 672960.0 633130.0 642210.0 676020.0 731130.0 829530.0 665750.0 True False 648824.623538995 662163.2927131337 694752.7971249239 736917.916067198 682953.7289830733 638201.7291742956 744358.6989194044 728593.8806770251 678908.2627495774 659851.972945663 0.9832881466468297 1.0035027852643263 1.0528918994111045 1.116792775169714 1.035010512940169 0.967189241437412 1.1280692177011953 1.1041777709998948 1.0288796435946757 1.0 19.331782890044966 -4.711943777530837 3.7421398418058427 1.0592731448247459 0.9884512926083661 0.19954027314996592 0.048591594853037615 0.33503610576042137 9.455173487082646 0.01315596333695766 0.037876827660954855 1.941137155157932e-05 4.711943777530837 -0.07082185221637982 YYDDIYFDS(ph)DS(ph)EDEDRAVQVTK ddPTM_KYSE-520_SHP099_60min_R1 5 YYDDIYFDSDSEDEDRAVQVTK 22 1 G3V2W9;A0A087X060;Q56P03 G3V2W9 EAPP E2F-associated phosphoprotein 2 YYDDIYFDS(1)DS(1)EDEDRAVQVTK;YYDDIYFDS(1)DS(1)EDEDRAVQVTK;YYDDIYFDS(1)DS(1)EDEDRAVQVTK;YYDDIYFDS(1)DS(1)EDEDRAVQVTK;YYDDIYFDS(1)DS(1)EDEDRAVQVTK 191.22 7.7001e-14 1957790000.0 3776090.0 4081760.0 3813820.0 3181180.0 3320160.0 3491000.0 2942160.0 3191570.0 4911070.0 3285750.0 True False 3566622.760251212 3885666.1227533272 4059664.93952775 3483518.390743355 3581437.7028737287 3469211.374079304 3239582.245514504 3180499.188588039 4019343.485999976 3256640.8112748195 1.0951845680687915 1.193151577939071 1.2465805026678962 1.0696661353266415 1.099733716556775 1.0652729530590366 0.9947619136561647 0.976619582232351 1.2341992006255655 1.0 21.634953176878458 -5.3626362210086445 7.154784695496752 1.0600080918352723 1.1794501923599183 0.3230159094944882 0.07654957843110888 0.2973952188426208 18.284439395210143 0.02156320534275183 0.032081251486124514 4.338741531314894e-06 5.3626362210086445 0.11944210052464599 YYDILK ddPTM_KYSE-520_SHP099_60min_R1 1 YYDILK 6 0 O43143 O43143 DHX15 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 0 121.68 0.060625 379490000.0 762850.0 724190.0 487860.0 554800.0 760950.0 703560.0 560600.0 632950.0 627620.0 577170.0 False True 720533.1897962266 689398.8253686485 519308.2362035992 607528.0251932979 820832.4357867584 699168.8210676695 617270.9189287568 630754.4441816406 513660.0290126816 572056.7228314647 1.259548504613073 1.2051231947006666 0.9077915099628924 1.0620066174316833 1.4348794499327757 1.2222019131372985 1.0790379595112507 1.1026082187438413 0.8979180009811938 1.0 19.12579868033973 -7.4527683676255165 1.95199750879506 0.9549972228456495 1.1710984952496792 0.2885054704491712 0.13345648576159244 0.513902761684599 3.5435866765341815 0.12079525591271761 0.04143272499386328 3.525588593202815e-08 7.4527683676255165 0.21610127240402977 YYDSRPGGYGYGYGR ddPTM_KYSE-520_SHP099_60min_R1 1 YYDSRPGGYGYGYGR 15 1 P98179 P98179 RBM3 RNA-binding protein 3 0 85.536 0.0087141 572640000.0 603780.0 618870.0 446350.0 425190.0 678420.0 612590.0 522720.0 426370.0 548520.0 420530.0 False True 570287.11979441 589138.5562571922 475122.43518525077 465599.9297619648 731807.7943182233 608766.5985812765 575561.6388555821 424891.02198550646 448922.59506394964 416804.4313673895 1.36823670017974 1.4134651935547677 1.1399169476834503 1.1170704885130285 1.7557581907596758 1.4605569249446948 1.380891361848927 1.0194014026952345 1.0770581147402671 1.0 18.669011090531573 -7.260117063432897 24.29206835843639 1.036172290294488 1.3767098265309328 0.4717265908326702 0.1670009107044403 77.88277842722381 1430820.4816360595 0.0907065823862253 0.04868473117873044 5.493927658928942e-08 7.260117063432897 0.34053753623644467 YYFEGIK ddPTM_KYSE-520_SHP099_60min_R1 2 YYFEGIK 7 0 H0YJU2;G3V438;O95433 H0YJU2 AHSA1 Activator of 90 kDa heat shock protein ATPase homolog 1 0 ; 123.96 0.019175 596790000.0 1539750.0 1377490.0 948630.0 953520.0 1555400.0 1447320.0 1119370.0 1181950.0 1100220.0 1059220.0 False True 1454336.998084473 1311313.3127453567 1009780.2076616647 1044142.2541137588 1677801.1309845897 1438286.739023904 1232526.8435984345 1177850.0913192027 900447.7822891755 1049836.1348606914 1.385299047910422 1.2490647532525276 0.9618455434434614 0.9945764100149895 1.5981552503974599 1.3700107009697837 1.1740183088306304 1.121937083519704 0.8577031713703215 1.0 20.001732729717585 -7.497057109644087 2.5555441993617234 0.9321531474736239 1.2460032698183694 0.32979095904188827 0.17912963387848274 0.38861529869536454 4.795324192040015 0.15498217898848618 0.05368063866399883 3.183778827870334e-08 7.497057109644087 0.3138501223447455 YYGGGSEGGR ddPTM_KYSE-520_SHP099_60min_R1 3 YYGGGSEGGR 10 0 P14866 P14866 HNRNPL Heterogeneous nuclear ribonucleoprotein L 0 ;; 134.3 0.0022307 1543810000.0 1059060.0 1053550.0 807300.0 663690.0 969640.0 1107350.0 813880.0 880850.0 888020.0 872410.0 False True 1000311.8306162318 1002935.8765892108 859339.8497256713 726766.8980543262 1045945.1515030834 1100438.6178993727 896154.933103347 877794.5369419365 726777.9531624885 864681.1261247101 1.1568563258682254 1.159891023739728 0.9938228368381568 0.8405027889431543 1.209631065027121 1.272652524325667 1.0363993222792949 1.0151656031582388 0.8405155741281529 1.0 19.721808673575044 -7.394936945992126 2.7440253536273103 0.9236789445899694 1.0967207905680283 0.25073807125601255 0.12035032789779627 0.439801302185567 6.236692453030205 0.09195513823909326 0.03599415969950207 4.027755079362571e-08 7.394936945992126 0.17304184597805894 YYIKSIIY(ph)YMVTSPK ddPTM_KYSE-520_SHP099_60min_R1 1 YYIKSIIYYMVTSPK 15 1 A6NKB5-4;A6NKB5-3;A6NKB5 A6NKB5-4 PCNXL2 Pecanex-like protein 2 1 YYIKSIIY(0.595)Y(0.114)MVT(0.145)S(0.145)PK 63.16 0.038127999999999995 45973000.0 45410.0 55301.0 62981.0 32127.0 54813.0 74235.0 33215.0 47787.0 53224.0 36743.0 True False 42891.01677740926 52644.256951506686 67040.85603316299 35180.34042066522 59126.47125669171 73771.67182892498 36572.69634716133 47621.23805056962 43559.86326785463 36417.485605621456 1.1777588722596637 1.4455763783807316 1.8408974402893554 0.966028813785945 1.6235736837241959 2.0257211776734385 1.0042619840156102 1.3076476109931856 1.196124953259559 1.0 15.152343696440646 YYKVDENGK ddPTM_KYSE-520_SHP099_60min_R1 1 YYKVDENGK 9 1 P62979;A0A2R8Y422 P62979 RPS27A Ubiquitin-40S ribosomal protein S27a;Ubiquitin;40S ribosomal protein S27a 0 81.017 0.010789 1241500000.0 2827800.0 2751500.0 2249800.0 2018600.0 2735000.0 2633400.0 2032600.0 2269000.0 2802900.0 2300600.0 False True 2670936.2969204555 2619313.8099143 2394825.707807276 2210447.1370857786 2950228.939978685 2616963.9737898665 2238075.0442643403 2261129.36858858 2293964.015359044 2280218.4738397137 1.17135104708752 1.1487117747553268 1.050261514535742 0.9694014685196172 1.2938360836147096 1.1476812436235986 0.9815178106576747 0.9916283875996368 1.0060281686500785 1.0 21.120740628812868 -6.763412993444366 24.96031332448725 0.9940959345501409 1.1275427457783684 0.4158803096009398 0.07858048378709229 57.24292849984593 723932.3254047475 0.033877069660350916 0.024143813101533525 1.7241974821480966e-07 6.763412993444366 0.13344681122822755 YYLHDDR ddPTM_KYSE-520_SHP099_60min_R1 8 YYLHDDR 7 0 Q9Y2W1;A0A3B3ITZ9 Q9Y2W1 THRAP3 Thyroid hormone receptor-associated protein 3 0 ;;;;;;; 186.43 0.00018596 7327630000.0 6834260.0 6292510.0 4375080.0 3913400.0 6538180.0 6766660.0 5310040.0 5473950.0 5381870.0 5279810.0 False True 6455149.974040458 5990208.374349935 4657104.6571755 4285328.359393387 7052697.568844549 6724426.764974925 5846830.66419632 5454962.145079536 4404658.073902163 5233034.991030025 1.233538469569813 1.144691060659404 0.8899433436157543 0.8188992366263349 1.3477260482556714 1.2849955669131399 1.1172924840400276 1.0424088802062126 0.8417023928661306 1.0 22.31921647498361 -7.55950560187497 4.9210359086681885 0.9220980303207791 1.1134904270684538 0.19900768752245912 0.15786299309182333 0.3574146814828722 20.883700403033643 0.12241446174690891 0.04502364066679197 2.757365885422992e-08 7.55950560187497 0.19139239674767472 YYPTEDVPR ddPTM_KYSE-520_SHP099_60min_R1 2 YYPTEDVPR 9 0 Q02878;F8VZ45;U3KQR5;F8VR69 Q02878 RPL6 60S ribosomal protein L6 0 ; 152.41 0.0018334 670300000.0 656460.0 798700.0 531660.0 489750.0 682550.0 737050.0 587440.0 612230.0 671980.0 663390.0 False True 620044.8551794336 760329.2531268583 565931.6542860771 536295.6927512928 736262.801821738 732449.797555184 646824.1680619131 610106.3170255566 549965.3712372794 657512.8807096096 0.9430155261905451 1.1563716475124957 0.8607156922542795 0.815642869494062 1.1197693968019895 1.1139702643767222 0.9837437212847284 0.9279001749244968 0.8364328477394064 1.0 19.326659631585258 -7.2646607713383435 4.170035926426999 0.9092726523923774 1.002407988539405 0.0928555262896602 0.11056534178740449 0.5076393152487229 21.859232510563796 0.06443070447024556 0.031827437281548514 5.4367483164731654e-08 7.2646607713383435 0.09313533614702763 YYS(ph)DS(ph)DDELTVEQR ddPTM_KYSE-520_SHP099_60min_R1 2 YYSDSDDELTVEQR 14 0 Q8NFC6 Q8NFC6 BOD1L1 Biorientation of chromosomes in cell division protein 1-like 1 2 YYS(1)DS(1)DDELTVEQR;Y(0.001)Y(0.001)S(0.998)DS(1)DDELTVEQR 283.05 1.3485e-32 638780000.0 1000150.0 967380.0 899530.0 731160.0 763740.0 826550.0 779730.0 809830.0 1108720.0 861920.0 True False 944669.6857504039 920905.6127330159 957515.1430988875 800649.2265687296 823841.9929138287 821391.1948568441 858552.7178314639 807020.8887457426 907404.3965567384 854284.0593636138 1.1058027776546848 1.077985246990364 1.1208392953184378 0.9372166292850662 0.9643654050241058 0.9614965723095984 1.004996767083574 0.9446751111649219 1.0621811171716067 1.0 19.704356336898723 -5.255501817567196 24.999791140241538 0.9791803602546817 1.0991867268775184 0.7060317532678606 0.03526322291803751 249.67413344182367 1051236.1238837892 0.009279470332926852 0.015558194352216817 5.552622932847387e-06 5.255501817567196 0.1200063666228367 YYSHVDYR ddPTM_KYSE-520_SHP099_60min_R1 1 YYSHVDYR 8 0 F8W0Q9;Q8NEY8-9;Q8NEY8-8;Q8NEY8-2;Q8NEY8;F8VWU8;F8VPY7;F8VRK2 F8W0Q9 PPHLN1 Periphilin-1 0 104.44 0.0033281 283600000.0 351730.0 226000.0 214550.0 176970.0 279630.0 335190.0 238820.0 215740.0 270990.0 232730.0 False True 332218.83574362786 215142.6207670838 228380.2362921372 193789.17559202918 301635.2901229401 333097.95487758296 262962.2562585901 214991.64829409475 221785.0471019828 230668.1932612004 1.440245536442188 0.9326930502440968 0.9900811770503948 0.8401209237052863 1.307658788402522 1.444056721337366 1.140002236722863 0.9320385496349985 0.9614895056243901 1.0 17.815459559567866 -7.254153139866815 22.110787920718707 0.9600730256890662 1.146122574341829 0.1724275307999057 0.19165716198072397 229.2252864861644 695616.5316535953 0.1003334903615706 0.05614027834056352 5.56989310080543e-08 7.254153139866815 0.1860495486527629 YYSSEPQAVDFLECAEEAR ddPTM_KYSE-520_SHP099_60min_R1 4 YYSSEPQAVDFLECAEEAR 19 0 P05120;H7C004;H7BYS2 P05120 SERPINB2;SERPINB10 Plasminogen activator inhibitor 2 0 ;;; 237.46 3.7200000000000005e-25 391983000.0 344002.0 395921.0 452642.0 236494.0 386037.0 403095.0 292280.0 310926.0 396528.0 391421.0 False True 324919.5233090146 376900.36087046313 481820.02757280687 258970.31865548607 416415.9156499277 400579.13458450144 321826.5147779107 309847.47027667396 324528.5108574305 387953.31446092954 0.8375222254783365 0.9715095781413164 1.2419536310504458 0.6675295944186779 1.0733660472228408 1.0325446894070638 0.8295495947111482 0.7986720533815118 0.8365143401555176 1.0 18.565523526209784 -6.77262292560944 24.954378730259787 0.8494066394772741 0.9739834628337353 0.10078394997270113 0.14948878899773246 448.01117984144184 999659.141889043 0.0611932609364037 0.04167967905832487 1.688018003977447e-07 6.77262292560944 0.12457682335646114 YYSSEPQAVDFLECAEEARK ddPTM_KYSE-520_SHP099_60min_R1 1 YYSSEPQAVDFLECAEEARK 20 1 P05120;H7C004;H7BYS2 P05120 SERPINB2;SERPINB10 Plasminogen activator inhibitor 2 0 189.15 1.5248e-12 254660000.0 151470.0 166480.0 89653.0 82780.0 148020.0 143080.0 114750.0 101960.0 114470.0 102360.0 False True 143067.65715204112 158482.05090842542 95432.17582987192 90647.38631128558 159668.3318814061 142186.9846471689 126350.0498520777 101606.32455764293 93685.13355387279 101453.17003487507 1.410184197328293 1.5621202457640935 0.9406524783510125 0.8934899351111951 1.5738131378893263 1.401503615887915 1.2454026799620377 1.0015096080557682 0.9234322941478124 1.0 16.630454419099074 -7.258744783930311 3.7933144303623094 0.9629240763059551 1.2894619050174179 0.31195729909295433 0.21543875800300297 0.31530061737338794 10.320024398380136 0.1321755946755242 0.0647029964942468 5.5113147737499195e-08 7.258744783930311 0.32653782871146275 YYTLFGR ddPTM_KYSE-520_SHP099_60min_R1 1 YYTLFGR 7 0 P07814 P07814 EPRS Bifunctional glutamate/proline--tRNA ligase;Glutamate--tRNA ligase;Proline--tRNA ligase 0 90.986 0.054857 309400000.0 192420.0 181550.0 133540.0 133630.0 193200.0 227600.0 149190.0 179270.0 154710.0 138900.0 False True 181746.07902023962 172828.06548789438 142148.20207155455 146330.1550226754 208403.74084237043 226179.46397606647 164271.58115408698 178648.15421193262 126618.56392172314 137669.45406256476 1.3201627060832533 1.2553842583653418 1.0325326198137925 1.0629093869739232 1.513797975458376 1.6429168366809805 1.1932318775625617 1.2976600759290062 0.9197288155452444 1.0 17.07084896592838 -7.758148891561489 24.992821821388493 0.9598643108560507 1.2885520341353884 0.3617955371431979 0.17528852784176313 95.59008445639277 726097.868768291 0.1447572335588513 0.04960354601729893 1.7452237257142334e-08 7.758148891561489 0.3286877232793377 YYTVFDR ddPTM_KYSE-520_SHP099_60min_R1 2 YYTVFDR 7 0 A0A1B0GW44;A0A1B0GVP3;A0A1B0GV23;A0A1B0GVD5;A0A1B0GWE8;P07339;H7C1V0;H7C469 A0A1B0GW44 CTSD Cathepsin D;Cathepsin D light chain;Cathepsin D heavy chain 0 ; 90.777 0.055216999999999995 582510000.0 1069530.0 936070.0 731450.0 616110.0 1097830.0 908850.0 760480.0 777700.0 981780.0 883380.0 False True 1010201.0388448042 891099.7921302845 778600.43736138 674664.9091597742 1184222.9752017553 903177.5300292111 837356.7399695703 775002.3402165446 803513.5006597464 875553.9404592402 1.1537850407194097 1.0177554470977428 0.8892660993027948 0.770557789741547 1.3525414260377995 1.0315498432403627 0.9563736753104727 0.885156589907008 0.9177201580959048 1.0 19.739836536289104 -6.866601407387608 4.382606001188205 0.9256872501240775 1.0305158129179135 0.09328963899160447 0.14626627925218794 0.5881822828347618 19.799562461594824 0.06716412675098021 0.04456674211993426 1.359560669972862e-07 6.866601407387608 0.10482856279383601 YYVGHK ddPTM_KYSE-520_SHP099_60min_R1 1 YYVGHK 6 0 P61326;Q96A72;F5H6N1;P61326-2;F5H124 P61326 MAGOH;MAGOHB Protein mago nashi homolog;Protein mago nashi homolog 2 0 72.054 0.056974000000000004 0.0 133620.0 126830.0 95693.0 86123.0 134050.0 142680.0 89928.0 99070.0 115780.0 113770.0 False True 126207.83223513384 120736.89642428893 101861.5238942135 94308.10402617577 144598.972359833 141789.4811955413 99018.79985270293 98726.3492931119 94757.27057628546 112762.08631172073 1.1192399534560185 1.070722442031824 0.9033313166326703 0.8363458597730218 1.2823367950119513 1.2574215840914553 0.8781213889478267 0.8755278704243881 0.8403291715828797 1.0 16.782922550289715 -6.853158187802833 24.999842991872093 0.8881162414606902 1.0682621016255283 0.2979575863821725 0.1342617217556479 26.446923232007784 7198.850222213843 0.061957943005304425 0.041772043720597264 1.4023028355137083e-07 6.853158187802833 0.18014586016483802 YYVTIIDAPGHR ddPTM_KYSE-520_SHP099_60min_R1 6 YYVTIIDAPGHR 12 0 Q5VTE0;P68104;A0A087WVQ9;A0A087WV01;A6PW80;Q5JR01 Q5VTE0 EEF1A1P5;EEF1A1 Putative elongation factor 1-alpha-like 3;Elongation factor 1-alpha 1;Elongation factor 1-alpha 0 ;;;;; 178.81 1.3866999999999998e-06 14414420000.0 7692430.0 6605200.0 4428840.0 4258490.0 6530290.0 5873190.0 4785850.0 4288610.0 4109230.0 4394570.0 False True 7265715.573420973 6287876.2773926705 4714330.11279455 4663215.60923829 7044186.670732509 5836533.2426607935 5269650.423394917 4273733.812879101 3363097.4172584964 4355637.528723728 1.6681175891029538 1.4436178942638322 1.0823513393172377 1.0706160874237594 1.6172573186540087 1.3399951681404012 1.2098459499082812 0.9811959293434076 0.7721251814642938 1.0 22.054452468909023 -7.188285241191397 2.2641243239990114 0.8835492520053536 1.3565412040664684 0.5344962345193466 0.189372436904814 0.2758163009854819 2.708050784952474 0.13007333047166783 0.05918885089748536 6.482085554386261e-08 7.188285241191397 0.4729919520611148